index spectrum_id peptide is_target run calcmass expmass retention_time charge mokapot score mokapot q-value mokapot PEP protein_list 140453 14350 YRHRRKYF True NCI_RA007_Epitope_Rep5 1224.6628436050398 1224.6617499358601 61.883 2 0.6703773962852065 0.00039635354736424893 1.9874282130387637e-08 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 70610 13610 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 56.951 3 0.5598001949606778 0.00039635354736424893 2.5024301808917397e-07 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 49520 7843 KFIDTTSKF True NCI_RA007_Epitope_Rep4 1085.57571087973 1085.57460993586 36.868 2 0.4289470509619947 0.00039635354736424893 5.0135628362350305e-06 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 54541 6544 KYINTDAKF True NCI_RA007_Epitope_Rep4 1098.5709598524597 1098.5698699358602 31.784 2 0.3900145193807881 0.00039635354736424893 1.2231067690290636e-05 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 49523 7418 KFIDTTSKF True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 35.211 2 0.387256914506364 0.00039635354736424893 1.302861446782396e-05 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 54212 6569 KVVNPLFEK True NCI_RA007_Epitope_Rep3 1072.6280808057597 1072.6269899358601 32.891 2 0.3868576531632293 0.00039635354736424893 1.3148319840852567e-05 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 42509 12310 IEELQLIVNDK True H1975_Epitope_Rep1 1312.7238316654 1312.7227299358601 52.378 2 0.38635482340044347 0.00039635354736424893 1.3300642826297177e-05 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 2887 16562 [Acetylation]-AEVQVLVLDGR True H1975_Epitope_Rep3 1239.68230152289 1239.6812099358601 69.202 2 0.3862363244833316 0.00039635354736424893 1.333679606481952e-05 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000479992.5_1_19:49990877-49993604:+|nuORF', 'ENST00000472481.5_1_19:49990877-49994169:+|nuORF'] 28873 11457 FTDEEVDELYR True NCI_RA007_Epitope_Rep2 1414.6252398229399 1414.62414993586 49.158 2 0.3858213704055617 0.00039635354736424893 1.3464172143692362e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 69214 15035 LTSMVDDMWHY True H1975_Epitope_Rep2 1396.579158661 1396.5780699358602 62.984 2 0.3838044613428868 0.00039635354736424893 1.4100832441258309e-05 ['ENST00000569980.1_1_16:57492139-57494533:+|nuORF', 'ENSG00000088682|ENST00000262507|COQ9'] 28872 11826 FTDEEVDELYR True NCI_RA007_Epitope_Rep1 1414.6252398229399 1414.62414993586 49.98 2 0.3829560477599723 0.00039635354736424893 1.4377558473230294e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 2886 16586 [Acetylation]-AEVQVLVLDGR True H1975_Epitope_Rep1 1239.68230152289 1239.6812099358601 69.176 2 0.38073820766037214 0.00039635354736424893 1.5126873985149591e-05 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000479992.5_1_19:49990877-49993604:+|nuORF', 'ENST00000472481.5_1_19:49990877-49994169:+|nuORF'] 91635 14420 RIQLVEEELDR True PC9_epitope_Rep5 1398.7466923682998 1398.74503490379 60.466 3 0.37843021328949394 0.00039635354736424893 1.594814331557594e-05 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 42510 12825 IEELQLIVNDK True NCI_RA007_Epitope_Rep1 1312.7238316654 1312.7227299358601 53.875 2 0.3774994323299456 0.00039635354736424893 1.629183290409967e-05 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 118246 13131 TYLEKAIKI True PC9_epitope_Rep2 1077.6433965167298 1077.6422899358602 55.781 2 0.3754318835145403 0.00039635354736424893 1.7082004422113043e-05 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 92532 2637 RM[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep5 1293.59831426289 1293.59665490379 14.83 3 0.37503132194227246 0.00039635354736424893 1.7239465325395876e-05 ['ENSG00000171858|ENST00000343986|RPS21'] 41056 5121 HTLNQIDSVK True NCI_RA007_Epitope_Rep2 1153.6091362663299 1153.60802993586 24.543 2 0.3732963092298456 0.00039635354736424893 1.793843123003368e-05 ['CON__P12763'] 116294 5757 TTDNEISRTEY True H1975_Epitope_Rep2 1327.58918866739 1327.5880899358601 27.142 2 0.36960280737805 0.00039635354736424893 1.9522212559046536e-05 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF'] 28878 17435 FTDEEVDELYR True PC9_epitope_Rep3 1414.6252398229399 1414.62414993586 72.237 2 0.3648918546467552 0.00039635354736424893 2.1746815100922005e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 54199 5774 KVVEGSFVYK True NCI_RA007_Epitope_Rep3 1154.6335601090198 1154.6324699358602 29.693 2 0.363583815765954 0.00039635354736424893 2.24082843431833e-05 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 52621 4789 KLNEVIVNK True NCI_RA007_Epitope_Rep4 1055.63389446219 1055.63278993586 24.856 2 0.3624742410345473 0.00039635354736424893 2.29851394527304e-05 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 91634 14494 RIQLVEEELDR True PC9_epitope_Rep1 1398.7466923682998 1398.74503490379 60.576 3 0.3608225298785016 0.00039635354736424893 2.3871465972805896e-05 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 129385 5382 VREEEIEVDSR True NCI_RA007_Epitope_Rep1 1359.6630223139898 1359.66136490379 25.012 3 0.3607343128710595 0.00039635354736424893 2.391975416170141e-05 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENST00000477977.1_1_10:103920762-103923575:+|nuORF'] 33135 6218 GISQEQM[Oxidation]QEFR True NCI_RA007_Epitope_Rep2 1367.6139643270296 1367.61286993586 28.794 2 0.35847261934322294 0.00039635354736424893 2.519167422538043e-05 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 28877 16822 FTDEEVDELYR True PC9_epitope_Rep2 1414.6252398229399 1414.62414993586 69.954 2 0.35731237468450905 0.00039635354736424893 2.5870192148099753e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 11416 7958 DETNYGIPQR True NCI_RA007_Epitope_Rep1 1191.5520153130299 1191.55090993586 34.948 2 0.3560001965719176 0.00039635354736424893 2.6659609149743935e-05 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 28880 17314 FTDEEVDELYR True PC9_epitope_Rep5 1414.6252398229399 1414.62414993586 71.6 2 0.3556407844496465 0.00039635354736424893 2.6880006384390727e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 90910 4389 REYNWNVKNKA True NCI_RA007_Epitope_Rep4 1420.7211463267997 1420.71949490379 23.235 3 0.3556305350190565 0.00039635354736424893 2.688631814779341e-05 ['nc|ENSG00000006712|Q8N7H5-3|PAF1', 'nc|ENSG00000006712|Q8N7H5-2|PAF1', 'ENSG00000006712|ENST00000221265|PAF1'] 41268 6364 HVLVTLGEK True PC9_epitope_Rep6 994.58113061334 994.58002993586 33.058 2 0.3556076207620584 0.00039635354736424893 2.690043447509379e-05 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 56791 11743 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep1 1248.6271547796798 1248.62604993586 49.655 2 0.3536461434101831 0.00039635354736424893 2.813668521301525e-05 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 20061 5124 EM[Oxidation]EAELEDER True NCI_RA007_Epitope_Rep2 1265.5081618458098 1265.50706993586 24.554 2 0.3529146625037166 0.00039635354736424893 2.861211914478931e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 53884 4748 KTLDAEVVEK True NCI_RA007_Epitope_Rep4 1130.6183039676998 1130.61720993586 24.696 2 0.35216884688998845 0.00039635354736424893 2.910514222304419e-05 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 134214 14799 VYMDWYEKF True NCI_RA007_Epitope_Rep3 1279.5583465634297 1279.55724993586 65.634 2 0.35126106486565023 0.00039635354736424893 2.971671093276886e-05 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 115860 5068 TSEDISQTSKY True H1975_Epitope_Rep3 1257.5724759740901 1257.57136993586 24.612 2 0.35115086422389447 0.00039635354736424893 2.9791821970395052e-05 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 29012 8252 FTELAEDKENY True H1975_Epitope_Rep2 1357.60377610237 1357.6026699358601 36.695 2 0.3479458328219278 0.00039635354736424893 3.2061373448551255e-05 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 44323 14063 ILDLISESPIK True H1975_Epitope_Rep3 1226.7122043525399 1226.7111099358601 59.417 2 0.3472939679095164 0.00039635354736424893 3.2543717473006526e-05 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 73993 10043 NDEELNKLLGK True NCI_RA007_Epitope_Rep1 1271.6721304457099 1271.6710299358601 43.073 2 0.347231261415311 0.00039635354736424893 3.259049769256804e-05 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 141281 18840 YTDLLRLFEY True H1975_Epitope_Rep3 1331.67615319699 1331.6750499358602 79.021 2 0.3467258420748233 0.00039635354736424893 3.297001358105789e-05 ['ENSG00000213639|ENST00000395366|PPP1CB'] 99371 15088 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep5 1277.7343370957499 1277.7332299358602 63.043 2 0.3460728704603966 0.00039635354736424893 3.3466875968406536e-05 ['ENSG00000100632|ENST00000557016|ERH'] 95221 4923 RVLEKDSVTLK True NCI_RA007_Epitope_Rep4 1286.7558005000199 1286.75416490379 25.397 3 0.34502935129197887 0.00039635354736424893 3.4276507211772496e-05 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENST00000476031.1_1_1:161515507-161519517:-|nuORF'] 72762 13971 M[Oxidation]NSFVNDIFER True NCI_RA007_Epitope_Rep2 1386.62380073474 1386.62270993586 59.001 2 0.34457401660783227 0.00039635354736424893 3.463589624282087e-05 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 119135 10940 VAIEHLDKI True PC9_epitope_Rep2 1036.59169529704 1036.5905899358602 47.4 2 0.3441830790210415 0.00039635354736424893 3.494746258743578e-05 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 52694 7166 KLYDIDVAK True NCI_RA007_Epitope_Rep5 1063.5913609438699 1063.59026993586 34.239 2 0.343890299248141 0.00039635354736424893 3.5182633986986e-05 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF'] 28875 17425 FTDEEVDELYR True PC9_epitope_Rep1 1414.6252398229399 1414.62414993586 71.821 2 0.34334118606440606 0.00039635354736424893 3.562797748339837e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 56790 11520 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep1 1248.6271547796798 1248.62604993586 48.778 2 0.3423651716303195 0.00039635354736424893 3.643350797736646e-05 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 41702 11513 IAIDTIINQK True NCI_RA007_Epitope_Rep1 1127.6550238295902 1127.65392993586 48.75 2 0.34222191424947457 0.00039635354736424893 3.655326511440677e-05 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 7497 6890 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64520993586 31.423 2 0.3421769506570597 0.00039635354736424893 3.659093388770439e-05 ['ENSG00000163584|ENST00000295830|RPL22L1'] 84651 13167 QDGQFSVLFTK True NCI_RA007_Epitope_Rep1 1268.6401020414398 1268.63900993586 55.214 2 0.34210924434030926 0.00039635354736424893 3.664772889149617e-05 ['CON__P12763'] 73994 9762 NDEELNKLLGK True NCI_RA007_Epitope_Rep2 1271.6721304457099 1271.6710299358601 42.592 2 0.3417228931673186 0.00039635354736424893 3.697350792816259e-05 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 90237 7360 REEEEDFIRAA True H1975_Epitope_Rep1 1363.6368075661499 1363.6351649037902 33.317 3 0.34065850564434 0.00039635354736424893 3.788607817976012e-05 ['ENSG00000131558|ENST00000253861|EXOC4'] 112181 6801 TKFETEQAL True NCI_RA007_Epitope_Rep3 1065.5342399905699 1065.5331499358601 33.857 2 0.33990571919339946 0.00039635354736424893 3.854505778161e-05 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 18977 16172 ELENFFQELEK True H1975_Epitope_Rep1 1424.6823607762396 1424.6812699358602 67.552 2 0.3398536887104361 0.00039635354736424893 3.8591025824696924e-05 ['ENSG00000172137|ENST00000302628|CALB2'] 90238 7433 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6351649037902 33.536 3 0.3383240254562045 0.00039635354736424893 3.99672331857345e-05 ['ENSG00000131558|ENST00000253861|EXOC4'] 88656 4498 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 22.413 2 0.3381937916128078 0.00039635354736424893 4.008664479063247e-05 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 13087 13470 DLQFVEVTDVK True NCI_RA007_Epitope_Rep1 1291.6659824361102 1291.6648899358602 56.398 2 0.33793281729400504 0.00039635354736424893 4.032700738969796e-05 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 21957 4788 ESEEYQERY True H1975_Epitope_Rep2 1231.49931103383 1231.4982099358601 23.505 2 0.33753334549858716 0.00039635354736424893 4.069772337453381e-05 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 46645 14159 ITDLPDHLLSY True H1975_Epitope_Rep2 1285.6554177524101 1285.65432993586 59.616 2 0.33660173328242426 0.00039635354736424893 4.157556909378498e-05 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 140882 7581 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep2 1274.47613344154 1274.4750299358602 34.113 2 0.33658682973107495 0.00039635354736424893 4.15897653139898e-05 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 105717 9052 SSEVIKDANLY True H1975_Epitope_Rep2 1237.6190322436898 1237.61792993586 39.771 2 0.33641504904712627 0.00039635354736424893 4.1753743535967935e-05 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 38772 6619 HGTFEYEYSQR True NCI_RA007_Epitope_Rep2 1415.61059281831 1415.6089349037902 30.356 3 0.33573775145480833 0.00039635354736424893 4.240660187309672e-05 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 42511 12751 IEELQLIVNDK True NCI_RA007_Epitope_Rep2 1312.7238316654 1312.7227299358601 54.217 2 0.3357009990452582 0.00039635354736424893 4.244231868926655e-05 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 68423 11653 LTEVDNYHFY True H1975_Epitope_Rep3 1299.5771674317102 1299.57606993586 49.959 2 0.3351023909462314 0.00039635354736424893 4.302831289501975e-05 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 140883 7684 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep2 1274.47613344154 1274.4750299358602 34.508 2 0.33492426599267405 0.00039635354736424893 4.320424132899242e-05 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 114014 8941 TPAQFDADELR True H1975_Epitope_Rep3 1261.5938801250097 1261.59278993586 39.388 2 0.33490325327330417 0.00039635354736424893 4.322504230871105e-05 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 26751 6790 FKDLGEENFK True NCI_RA007_Epitope_Rep3 1225.5979028762897 1225.5962549037902 33.815 3 0.33478353410273876 0.00039635354736424893 4.334374631933998e-05 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 113816 5167 TNEAQAIETAR True H1975_Epitope_Rep3 1202.58912909774 1202.58802993586 24.975 2 0.3343543805530997 0.00039635354736424893 4.377194589085941e-05 ['EEA1-UBE2N|1|fusion', 'ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL', 'EEA1-UBE2N|2|fusion'] 29015 7254 FTENDKEYQEY True H1975_Epitope_Rep2 1464.6045043783597 1464.60340993586 32.837 2 0.3340155814784722 0.00039635354736424893 4.4112977819230486e-05 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 28464 5620 FSDNQLQEGK True NCI_RA007_Epitope_Rep2 1164.54111627616 1164.54000993586 26.475 2 0.33352253368982965 0.00039635354736424893 4.4614027566925884e-05 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 114012 8794 TPAQFDADELR True H1975_Epitope_Rep1 1261.5938801250097 1261.59278993586 38.754 2 0.33329094867710707 0.00039635354736424893 4.48513315162948e-05 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 53672 4193 KSDSGKPYYY True H1975_Epitope_Rep3 1206.55570371114 1206.55460993586 21.246 2 0.33316019276752223 0.00039635354736424893 4.498587350984269e-05 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 961 13296 [Acetylation]-ADSELQLVEQR True H1975_Epitope_Rep1 1328.65720897386 1328.65610993586 56.247 2 0.33301840749712264 0.00039635354736424893 4.513222035216751e-05 ['nc|ENSG00000198931|P07741-2|APRT', 'ENST00000564858.1_1_16:88877682-88878307:-|nuORF', 'ENSG00000198931|ENST00000378364|APRT'] 53191 6324 KQEELEAALQR True H1975_Epitope_Rep3 1313.6939285194496 1313.6922749037901 29.319 3 0.33278635343143326 0.00039635354736424893 4.537276810361376e-05 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 108559 16680 SYNNFFRMF True NCI_RA007_Epitope_Rep5 1224.53861417836 1224.53750993586 70.926 2 0.33266471551060933 0.00039635354736424893 4.549936996136781e-05 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 113891 6291 TNQELQEINR True NCI_RA007_Epitope_Rep1 1243.61567819875 1243.61458993586 28.499 2 0.33237283688089414 0.00039635354736424893 4.580460260608607e-05 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 17517 8291 EHFQDDVFNEK True NCI_RA007_Epitope_Rep1 1406.6102584651396 1406.6086049037901 36.251 3 0.3320464288753923 0.00039635354736424893 4.614837039342566e-05 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 11493 6931 DFHVDEQTTVK True NCI_RA007_Epitope_Rep1 1317.62009487285 1317.61843490379 30.964 3 0.33129778732380893 0.00039635354736424893 4.694660425621029e-05 ['CON__P34955'] 38405 4279 HEMQIQHPTA True H1975_Epitope_Rep2 1190.55024149122 1190.5491499358602 21.573 2 0.33102493776136555 0.00039635354736424893 4.72409487982767e-05 ['ENSG00000146731|ENST00000275603|CCT6A'] 77347 5391 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 25.774 2 0.33098255278413274 0.00039635354736424893 4.728683816196412e-05 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 53404 20111 KQVEEIFNLKF True PC9_epitope_Rep5 1393.7605515272896 1393.7594499358602 82.404 2 0.33042953801960845 0.00039635354736424893 4.788967716602805e-05 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 38221 6713 HEAM[Oxidation]ITDLEER True NCI_RA007_Epitope_Rep2 1358.6136299738598 1358.61252993586 30.724 2 0.33036471225233405 0.00039635354736424893 4.796084482717257e-05 ['ENSG00000100345|ENST00000216181|MYH9'] 21051 6592 EQVANSAFVER True NCI_RA007_Epitope_Rep5 1248.6098645423197 1248.6087699358602 32.016 2 0.32966034602947586 0.00039635354736424893 4.87409701046877e-05 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 53192 6885 KQEELEAALQR True NCI_RA007_Epitope_Rep1 1313.6939285194496 1313.6922749037901 30.785 3 0.3293378871262671 0.00039635354736424893 4.910233347717946e-05 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 139107 14022 YLDLKSDEWEY True H1975_Epitope_Rep2 1459.6507262947903 1459.64962993586 59.085 2 0.3292631205460576 0.00039635354736424893 4.918650248879569e-05 ['ENSG00000166170|ENST00000299204|BAG5', 'nc|ENSG00000166170|Q9UL15-2|BAG5'] 90904 3604 REYDGNIRQA True NCI_RA007_Epitope_Rep4 1220.5897978040798 1220.5881449037902 19.919 3 0.3290996122113482 0.00039635354736424893 4.937107628242123e-05 ['ENSG00000115760|ENST00000421745|BIRC6'] 58064 12941 LEINFNTLQTK True NCI_RA007_Epitope_Rep1 1319.7085159544301 1319.7074099358601 54.329 2 0.329060178526668 0.00039635354736424893 4.9415693937480334e-05 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 67970 4980 LTDEEVEM[Oxidation]TR True H1975_Epitope_Rep3 1237.54963273497 1237.5485299358602 24.283 2 0.3289176836658094 0.00039635354736424893 4.957725760916056e-05 ['ENSG00000165688|ENST00000371717|PMPCA'] 94862 4860 RSYHLQIVTK True NCI_RA007_Epitope_Rep5 1243.7037053575098 1243.70206490379 25.385 3 0.32853218397802597 0.00039635354736424893 5.0016997761399316e-05 ['ENSG00000131203|ENST00000518237|IDO1'] 45964 9244 ISEQTGKELLY True H1975_Epitope_Rep3 1279.66598243611 1279.6648899358602 40.548 2 0.3285091100101086 0.00039635354736424893 5.0043441649160204e-05 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 11415 7343 DETNYGIPQR True H1975_Epitope_Rep3 1191.5520153130299 1191.55090993586 33.221 2 0.32840557275422644 0.00039635354736424893 5.0162272596624695e-05 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 26574 4999 FIKVPQNQNGK True NCI_RA007_Epitope_Rep2 1271.6986199770697 1271.69698490379 24.069 3 0.328303815360487 0.00039635354736424893 5.027933570768327e-05 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 48804 11101 KDQIYDIFQK True NCI_RA007_Epitope_Rep2 1296.6714021697196 1296.6703099358601 47.762 2 0.3276604516850642 0.00039635354736424893 5.10258203050156e-05 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 75579 10687 NLDEEKQLLY True H1975_Epitope_Rep3 1263.63468230783 1263.63358993586 46.183 2 0.32743832410387685 0.00039635354736424893 5.128611689780218e-05 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6'] 137066 11942 YAPELLYYANK True H1975_Epitope_Rep3 1343.6761531969898 1343.6750499358602 51.091 2 0.32682562398413345 0.00039635354736424893 5.2011002832982615e-05 ['CON__P02769'] 962 13278 [Acetylation]-ADSELQLVEQR True H1975_Epitope_Rep3 1328.65720897386 1328.65610993586 56.33 2 0.3265682143755131 0.00039635354736424893 5.2318592430365835e-05 ['nc|ENSG00000198931|P07741-2|APRT', 'ENST00000564858.1_1_16:88877682-88878307:-|nuORF', 'ENSG00000198931|ENST00000378364|APRT'] 45961 9093 ISEQTGKELLY True H1975_Epitope_Rep1 1279.66598243611 1279.6648899358602 39.88 2 0.32650967807576226 0.00039635354736424893 5.238879340520222e-05 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 142752 19378 YYQNYFEKL True PC9_epitope_Rep3 1266.5920892198599 1266.59098993586 79.761 2 0.32623589285328525 0.00039635354736424893 5.271838915277583e-05 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 13088 13337 DLQFVEVTDVK True NCI_RA007_Epitope_Rep2 1291.6659824361102 1291.6648899358602 56.516 2 0.3261970025963982 0.00039635354736424893 5.276537499621764e-05 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 21958 4906 ESEEYQERY True H1975_Epitope_Rep2 1231.49931103383 1231.4982099358601 23.954 2 0.3259441255159763 0.00039635354736424893 5.307191530584687e-05 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 45976 13243 ISESIKELQFY True H1975_Epitope_Rep2 1355.6972825643898 1355.69618993586 56.068 2 0.32560517316341503 0.00039635354736424893 5.3485592090058196e-05 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 15096 13162 DYTYEELLNR True NCI_RA007_Epitope_Rep2 1314.6091958359798 1314.60808993586 55.83 2 0.3254979980045725 0.00039635354736424893 5.361706454918533e-05 ['ENSG00000125977|ENST00000374980|EIF2S2'] 71884 11960 M[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep2 1214.5641606002998 1214.56306993586 51.124 2 0.3250305096248776 0.00039635354736424893 5.419432517943335e-05 ['CON__P02769'] 77356 6732 NSEEMKEAYY True H1975_Epitope_Rep3 1262.5125185698198 1262.5114299358602 30.849 2 0.3249742125537904 0.00039635354736424893 5.4264259490114394e-05 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 90239 7542 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6351649037902 33.961 3 0.32495099900922203 0.00039635354736424893 5.429312248787402e-05 ['ENSG00000131558|ENST00000253861|EXOC4'] 54608 18279 KYLDEDTIYHL True PC9_epitope_Rep1 1408.68744615668 1408.68580490379 75.099 3 0.3248020941254433 0.00039635354736424893 5.4478631613400046e-05 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 40813 6551 HSDLLEDSKY True H1975_Epitope_Rep2 1205.55643198713 1205.55532993586 30.109 2 0.3247854736883897 0.00039635354736424893 5.449937701886515e-05 ['ENSG00000171428|ENST00000307719|NAT1'] 18978 16177 ELENFFQELEK True H1975_Epitope_Rep3 1424.6823607762396 1424.6812699358602 67.681 2 0.3246865455597647 0.00039635354736424893 5.4623021328952156e-05 ['ENSG00000172137|ENST00000302628|CALB2'] 54078 8260 KVLDAIIQEK True NCI_RA007_Epitope_Rep4 1155.68632395787 1155.6852299358602 38.581 2 0.3245932937615901 0.00039635354736424893 5.473982795824965e-05 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 7500 6977 ASDKETYELRY True H1975_Epitope_Rep3 1373.64630962069 1373.64520993586 31.798 2 0.3241550991997243 0.00039635354736424893 5.529206118227799e-05 ['ENSG00000163584|ENST00000295830|RPL22L1'] 63882 9649 LNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 1088.58998142532 1088.5888899358602 41.532 2 0.3238934531400627 0.00039635354736424893 5.5624452548330944e-05 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 68407 10067 LTETIYKNYY True H1975_Epitope_Rep2 1306.64451871554 1306.64342993586 43.715 2 0.3237981658206714 0.00039635354736424893 5.574599991278136e-05 ['ENSG00000146834|ENST00000310512|MEPCE', 'nc|ENSG00000289690|Q7L2J0-2|MEPCE'] 14183 5897 DSDSMEDTGHY True H1975_Epitope_Rep2 1255.42991114467 1255.42880993586 27.668 2 0.3232107992678849 0.00039635354736424893 5.650112432175402e-05 ['ENSG00000132716|ENST00000368074|DCAF8', 'nc|ENSG00000132716|Q5TAQ9-2|DCAF8'] 77354 6620 NSEEMKEAYY True H1975_Epitope_Rep2 1262.5125185698198 1262.5114299358602 30.372 2 0.32315231426874824 0.00039635354736424893 5.657687092255903e-05 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 41382 11510 HYDPTINKW True PC9_epitope_Rep5 1172.56145779792 1172.56036993586 49.27 2 0.32265596670800684 0.00039635354736424893 5.72238149652209e-05 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 29016 7344 FTENDKEYQEY True H1975_Epitope_Rep2 1464.6045043783597 1464.60340993586 33.189 2 0.3226397734747361 0.00039635354736424893 5.724504553021101e-05 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 43965 5729 IIEDQQESLNK True NCI_RA007_Epitope_Rep2 1315.6619596848298 1315.66086993586 26.901 2 0.32228626164281177 0.00039635354736424893 5.771049454139975e-05 ['ENSG00000138385|ENST00000260956|SSB'] 131167 14271 VTEITDDLHFY True H1975_Epitope_Rep2 1351.6295969273901 1351.6284899358602 60.044 2 0.32214235865587265 0.00039635354736424893 5.7901045539037974e-05 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 42947 14324 IESLIAVFQK True H1975_Epitope_Rep3 1146.6648602373 1146.66376993586 60.444 2 0.32200774101369817 0.00039635354736424893 5.80798707706272e-05 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 120207 9495 VEAQLQELQVK True NCI_RA007_Epitope_Rep2 1283.7085159544297 1283.7074099358601 41.546 2 0.3218951466650394 0.00039635354736424893 5.822986447965383e-05 ['ENSG00000100345|ENST00000216181|MYH9'] 106265 4662 STESLQANVQR True NCI_RA007_Epitope_Rep5 1231.6156781987497 1231.61458993586 24.616 2 0.32178768594131907 0.00039635354736424893 5.83733806391479e-05 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 75578 10786 NLDEEKQLLY True H1975_Epitope_Rep2 1263.63468230783 1263.63358993586 46.516 2 0.32178398590980384 0.00039635354736424893 5.837832840677444e-05 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6'] 95296 6846 RVQEAVESMVK True NCI_RA007_Epitope_Rep4 1274.66527124346 1274.66362490379 32.954 3 0.3214887447741907 0.00039635354736424893 5.877448652956599e-05 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 25979 7003 FGDPVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep1 1237.56488887629 1237.56378993586 31.238 2 0.32130579984600305 0.00039635354736424893 5.902131210856045e-05 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 7495 6883 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64466490379 31.396 3 0.32125569646386304 0.00039635354736424893 5.9089091204701516e-05 ['ENSG00000163584|ENST00000295830|RPL22L1'] 43964 5844 IIEDQQESLNK True NCI_RA007_Epitope_Rep1 1315.6619596848298 1315.66086993586 26.784 2 0.32110355850521927 0.00039635354736424893 5.929537851027541e-05 ['ENSG00000138385|ENST00000260956|SSB'] 35828 12103 GTLDYILQR True NCI_RA007_Epitope_Rep5 1077.5818588893299 1077.5807699358602 53.21 2 0.3210837172662025 0.00039635354736424893 5.932233472789107e-05 ['ENSG00000140718|ENST00000471389|FTO'] 142751 18723 YYQNYFEKL True PC9_epitope_Rep2 1266.5920892198599 1266.59098993586 77.393 2 0.32108225592880607 0.00039635354736424893 5.93243205787229e-05 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 29019 7353 FTENDKEYQEY True H1975_Epitope_Rep3 1464.6045043783597 1464.60340993586 33.26 2 0.32093713345587793 0.00039635354736424893 5.9521862891979896e-05 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 41168 7336 HVGDEDFVHLR True H1975_Epitope_Rep1 1322.6367479965 1322.63509490379 33.228 3 0.32091232489446647 0.00039635354736424893 5.95556983551816e-05 ['ENSG00000160213|ENST00000291568|CSTB'] 62117 8878 LLEELEEGQK True H1975_Epitope_Rep1 1186.60813320682 1186.60702993586 39.061 2 0.3207960649693175 0.00039635354736424893 5.971451733869097e-05 ['ENSG00000169139|ENST00000523111|UBE2V2', 'ENST00000470565.5_1_20:48713044-48729665:-|nuORF', 'ENST00000490289.5_1_20:48711880-48729665:-|nuORF', 'nc|ENSG00000244687|Q13404-8|UBE2V1', 'nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF'] 54215 6857 KVVNPLFEK True NCI_RA007_Epitope_Rep5 1072.6280808057597 1072.6269899358601 33.059 2 0.3206257280081022 0.00039635354736424893 5.994797439828191e-05 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 54026 11520 KVIDDTNITRL True PC9_epitope_Rep4 1286.7194149913 1286.71777490379 52.074 3 0.3205894896887884 0.00039635354736424893 5.9997758818206365e-05 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 90401 3352 REIEDPEDRKP True H1975_Epitope_Rep2 1382.6790067312995 1382.67736490379 17.611 3 0.3205472224584185 0.00039635354736424893 6.005587802828097e-05 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 27762 14557 FPTQALNFAFK True H1975_Epitope_Rep3 1282.6710082468996 1282.66990993586 61.36 2 0.3205456391462802 0.00039635354736424893 6.005805624234896e-05 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENSG00000169100|ENST00000381401|SLC25A6'] 56625 10400 LDIDSPPITAR True NCI_RA007_Epitope_Rep2 1196.6401020414398 1196.63900993586 45.046 2 0.3204744021106305 0.00039635354736424893 6.015614113678072e-05 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 109764 8334 TEDQFIRTP True H1975_Epitope_Rep1 1105.54038800017 1105.53928993586 36.988 2 0.3203783545254794 0.00039635354736424893 6.028864083524263e-05 ['ENSG00000062822|ENST00000440232|POLD1'] 65811 10300 LSDIVIEKY True H1975_Epitope_Rep3 1078.5910265907 1078.58992993586 44.672 2 0.3202046195290832 0.00039635354736424893 6.052905381211481e-05 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'nc|ENSG00000184465|A2RRH5-3|WDR27', 'ENST00000546953.1_1_6:170072345-170089107:-|nuORF'] 86584 4637 QLEEAEEEAQR True H1975_Epitope_Rep3 1330.60008770426 1330.5989899358601 22.957 2 0.3201896220697867 0.00039635354736424893 6.0549852062418376e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 45963 9352 ISEQTGKELLY True H1975_Epitope_Rep2 1279.66598243611 1279.6648899358602 40.933 2 0.32002434701913485 0.00039635354736424893 6.0779526879850216e-05 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 141323 3984 YTDSSYEEKKY True H1975_Epitope_Rep3 1411.61434078607 1411.61269490379 20.451 3 0.3196899988019014 0.00039635354736424893 6.124682187603564e-05 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 28879 16110 FTDEEVDELYR True PC9_epitope_Rep4 1414.6252398229399 1414.62414993586 69.905 2 0.31956082293322613 0.00039635354736424893 6.14283225645955e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 56789 11242 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 48.218 2 0.3195179020961741 0.00039635354736424893 6.148874816510484e-05 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 16078 9153 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.60916993586 39.605 2 0.31926521731709434 0.00039635354736424893 6.184569445331683e-05 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 21959 5045 ESEEYQERY True H1975_Epitope_Rep2 1231.49931103383 1231.4982099358601 24.487 2 0.31924892743552774 0.00039635354736424893 6.186877754399171e-05 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 71629 16622 [Acetylation]-M[Oxidation]DPNTIIEALR True H1975_Epitope_Rep1 1329.65985220659 1329.6587499358602 69.313 2 0.31923937214671233 0.00039635354736424893 6.188232205458995e-05 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000527431.1_1_11:9406310-9430044:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 14125 11869 DSDFEYSTQSY True H1975_Epitope_Rep2 1340.50445598392 1340.5033499358601 50.732 2 0.3191978920302731 0.00039635354736424893 6.194115402039687e-05 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'ELP3-PNOC|1|fusion', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 73557 4140 MVSAEISENRK True NCI_RA007_Epitope_Rep4 1262.6288857347397 1262.6272349037902 22.215 3 0.31912680460609505 0.00039635354736424893 6.204210863565456e-05 ['nc|ENSG00000143751|Q6IQ49-3|SDE2', 'nc|ENSG00000143751|Q6IQ49-2|SDE2', 'ENSG00000143751|ENST00000272091|SDE2'] 54203 5936 KVVEGSFVYK True NCI_RA007_Epitope_Rep5 1154.6335601090198 1154.6324699358602 29.518 2 0.3190882798284142 0.00039635354736424893 6.209688822615719e-05 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 114446 16308 TPVLFDIYEIK True H1975_Epitope_Rep1 1336.72785441668 1336.7267499358602 68.086 2 0.3190181828706075 0.00039635354736424893 6.219668538806722e-05 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11', 'ANXA11|p.S301Dfs*8|1|0.09|ENSG00000122359|chr10:80164102-80164103|-/GCGAGGATCT|frameshift_variant'] 7879 10585 [Acetylation]-ATAEVLNIGKK True NCI_RA007_Epitope_Rep1 1184.6764878664596 1184.67538993586 45.158 2 0.3188071271376609 0.00039635354736424893 6.249813530713165e-05 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 41192 8129 HVIETLIGK True NCI_RA007_Epitope_Rep4 1008.5967806774798 1008.59568993586 38.059 2 0.31870407104449183 0.00039635354736424893 6.264586029224178e-05 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 141426 6424 YTETEPYHNY True H1975_Epitope_Rep2 1315.5356965425499 1315.5345899358601 29.63 2 0.31865063841465546 0.00039635354736424893 6.272259029777026e-05 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 54175 5260 KVTEGSFVYK True NCI_RA007_Epitope_Rep3 1156.61282466444 1156.61172993586 27.694 2 0.3184941871105865 0.00039635354736424893 6.294779744520514e-05 ['ENSG00000057608|ENST00000380191|GDI2'] 56792 11319 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep2 1248.6271547796798 1248.62604993586 48.618 2 0.318476392216677 0.00039635354736424893 6.297346384588105e-05 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 90680 9645 REQFNEFRDL True H1975_Epitope_Rep2 1352.6473126801998 1352.64565490379 42.078 3 0.3174973459983012 0.00039635354736424893 6.440183425665529e-05 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 33133 6247 GISQEQM[Oxidation]NEFR True NCI_RA007_Epitope_Rep2 1353.59831426289 1353.59720993586 28.904 2 0.31747196482757734 0.00039635354736424893 6.443929159987146e-05 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 86598 6845 QLEEQLDNETK True NCI_RA007_Epitope_Rep1 1345.63613885981 1345.63504993586 30.63 2 0.3174164067006986 0.00039635354736424893 6.452135992951191e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 134216 15067 VYMDWYEKF True NCI_RA007_Epitope_Rep4 1279.5583465634297 1279.55724993586 65.492 2 0.31726079069401814 0.00039635354736424893 6.475178674322434e-05 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 115858 2753 TSEDISQTSKY True H1975_Epitope_Rep2 1257.5724759740901 1257.57136993586 14.618 2 0.31725097473519115 0.00039635354736424893 6.476634918624116e-05 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 106266 4751 STESLQANVQR True NCI_RA007_Epitope_Rep5 1231.6156781987497 1231.61458993586 24.959 2 0.3171096516207116 0.00039635354736424893 6.497637215306083e-05 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 63799 8542 LNGTDPEDVIR True H1975_Epitope_Rep3 1227.60953018915 1227.6084299358602 37.845 2 0.3171061200112561 0.00039635354736424893 6.498162925862236e-05 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 4866 4759 ALEQQVEEM[Oxidation]K True H1975_Epitope_Rep3 1219.5754535599897 1219.57434993586 23.433 2 0.3168667623622766 0.00039635354736424893 6.533892695572346e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 113818 5685 TNEAQAIETAR True NCI_RA007_Epitope_Rep2 1202.58912909774 1202.58802993586 26.727 2 0.31681294241126307 0.00039635354736424893 6.541953608021229e-05 ['EEA1-UBE2N|1|fusion', 'ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL', 'EEA1-UBE2N|2|fusion'] 28870 11198 FTDEEVDELYR True H1975_Epitope_Rep1 1414.6252398229399 1414.62414993586 48.042 2 0.31638958494494024 0.00039635354736424893 6.605709996436762e-05 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 18834 15025 ELDPLTGEWHY True H1975_Epitope_Rep2 1358.61428121642 1358.6131899358602 62.943 2 0.31630343340586525 0.00039635354736424893 6.618760060838218e-05 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 84654 19452 QDGQFSVLFTK True PC9_epitope_Rep3 1268.6401020414398 1268.63900993586 80.049 2 0.31609473007683525 0.00039635354736424893 6.6504810133859e-05 ['CON__P12763'] 110698 9810 TGEAFVQFASK True H1975_Epitope_Rep1 1183.5873381925896 1183.58624993586 42.662 2 0.31582295708655966 0.00039635354736424893 6.692015971650957e-05 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 42512 8395 IEELQNVQRVT True H1975_Epitope_Rep2 1327.70957858359 1327.7084899358601 37.244 2 0.3157574834875043 0.00039635354736424893 6.702060992399834e-05 ['ENSG00000166920|ENST00000396650|C15orf48'] 56787 11020 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 47.349 2 0.3157475121938438 0.00039635354736424893 6.703592120155774e-05 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 17519 8085 EHFQDDVFNEK True NCI_RA007_Epitope_Rep2 1406.6102584651396 1406.60916993586 36.081 2 0.3156367354999506 0.00039635354736424893 6.720625826698532e-05 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 116230 15644 TTDDWKDFLY True H1975_Epitope_Rep2 1302.57683307854 1302.5757299358602 65.331 2 0.3155091095081299 0.00039635354736424893 6.740304054746898e-05 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 142444 19919 YYFEGIKQTF True PC9_epitope_Rep5 1294.6233893481397 1294.6222899358602 81.673 2 0.31534569945495217 0.00039635354736424893 6.765583855489669e-05 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 90242 7506 REEEEDFIRAA True H1975_Epitope_Rep3 1363.6368075661499 1363.6351649037902 33.853 3 0.3153085351489413 0.00039635354736424893 6.771346456237336e-05 ['ENSG00000131558|ENST00000253861|EXOC4'] 95037 2638 RTSEIYVHR True NCI_RA007_Epitope_Rep4 1159.6098049726697 1159.60816490379 14.769 3 0.3152985630437093 0.00039635354736424893 6.772893540082995e-05 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 65810 10402 LSDIVIEKY True H1975_Epitope_Rep2 1078.5910265907 1078.58992993586 45.025 2 0.31528813479658524 0.00039635354736424893 6.774511768435871e-05 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'nc|ENSG00000184465|A2RRH5-3|WDR27', 'ENST00000546953.1_1_6:170072345-170089107:-|nuORF'] 44850 9459 INEVENQILTR True NCI_RA007_Epitope_Rep2 1327.7095785835897 1327.7084899358601 41.405 2 0.31527900228301553 0.00039635354736424893 6.775929245805319e-05 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 88887 13247 QVEEADDWLRY True H1975_Epitope_Rep2 1422.6415585934199 1422.6404699358602 56.083 2 0.315250958772557 0.00039635354736424893 6.780283794437369e-05 ['ENSG00000100994|ENST00000216962|PYGB', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 141388 6841 YTEFTPTEKDE True H1975_Epitope_Rep2 1358.5877916850598 1358.58668993586 31.23 2 0.31512756560839317 0.00039635354736424893 6.799477349184418e-05 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 136717 10998 WYDNEFGYSNR True NCI_RA007_Epitope_Rep2 1449.5949427541698 1449.5938499358601 47.389 2 0.3150286478503378 0.00039635354736424893 6.81490303726019e-05 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 140736 10451 YSDDGQKWTVY True H1975_Epitope_Rep2 1360.5935457718401 1360.59244993586 45.215 2 0.3148947597937822 0.00039635354736424893 6.835837915038787e-05 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2'] 98414 11596 SFELFADKVPK True NCI_RA007_Epitope_Rep2 1279.68123857743 1279.68014993586 49.696 2 0.31485269498412377 0.00039635354736424893 6.842428481645633e-05 ['ENSG00000196262|ENST00000468812|PPIA'] 107365 8664 SVLIQKQIFK True NCI_RA007_Epitope_Rep4 1202.7386938838997 1202.7375899358601 40.111 2 0.31468950410250485 0.00039635354736424893 6.868056859905936e-05 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000528833.1_1_11:9431619-9435997:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 141363 14028 YTEAEEFFVKY True H1975_Epitope_Rep2 1424.6499980188 1424.64890993586 59.108 2 0.3146585088390302 0.00039635354736424893 6.872935361259789e-05 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 110143 13399 TENLLGSYFPK True H1975_Epitope_Rep3 1267.64485306871 1267.6437499358601 56.806 2 0.31449052321925913 0.00039635354736424893 6.899435822005362e-05 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1', 'ENST00000561059.5_1_14:24606216-24606483:+|nuORF', 'ENST00000561142.5_1_14:24605441-24607359:+|nuORF'] 94860 4741 RSYHLQIVTK True NCI_RA007_Epitope_Rep3 1243.7037053575098 1243.70206490379 25.601 3 0.3143823333302515 0.00039635354736424893 6.916557323942929e-05 ['ENSG00000131203|ENST00000518237|IDO1'] 95646 9174 RYFDPANGKF True NCI_RA007_Epitope_Rep2 1213.5880068989297 1213.5869099358601 40.293 2 0.3142195888854638 0.00039635354736424893 6.942392382445186e-05 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 68943 9036 LTPEEEEILNK True H1975_Epitope_Rep1 1313.6714617393698 1313.6703699358602 39.664 2 0.3142051193176785 0.00039635354736424893 6.944694037633485e-05 ['ENSG00000142937|ENST00000396651|RPS8'] 58498 6878 LEQEIATYR True H1975_Epitope_Rep3 1121.57168812845 1121.5705899358602 31.415 2 0.31405013558208583 0.00039635354736424893 6.969395014153546e-05 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 131168 14050 VTEITDDLHFY True H1975_Epitope_Rep3 1351.6295969273901 1351.6284899358602 59.366 2 0.31394259342948444 0.00039635354736424893 6.986586473085219e-05 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 49374 7271 KESYSVYVYK True NCI_RA007_Epitope_Rep1 1264.6339540318397 1264.6328499358601 32.273 2 0.3137904969036095 0.00039635354736424893 7.010972732098874e-05 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 141429 6467 YTETEPYHNY True H1975_Epitope_Rep3 1315.5356965425499 1315.5345899358601 29.847 2 0.3136641151974729 0.00039635354736424893 7.03130077365701e-05 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 140859 7494 YSDSLVQKGY True H1975_Epitope_Rep2 1158.5557037111398 1158.55460993586 33.775 2 0.31365454459559944 0.00039635354736424893 7.032842569347615e-05 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 44846 8941 INEVENQILTR True H1975_Epitope_Rep1 1327.7095785835897 1327.7084899358601 39.295 2 0.3135356563636487 0.00039635354736424893 7.052023324443696e-05 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 140956 8386 YSEYPPFSHRY True H1975_Epitope_Rep2 1444.6411646706 1444.63951490379 37.21 3 0.313197231073538 0.00039635354736424893 7.106909867394156e-05 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 84645 12591 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 53.48 2 0.31314411614553683 0.00039635354736424893 7.115562866353711e-05 ['CON__P12763'] 54544 7883 KYINTDAKF True PC9_epitope_Rep2 1098.5709598524597 1098.5698699358602 35.688 2 0.3130002309730059 0.00039635354736424893 7.139056295654444e-05 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 73384 5969 MTESYEQEKY True H1975_Epitope_Rep2 1306.5387333176598 1306.5376299358602 27.941 2 0.31299106402943655 0.00039635354736424893 7.140555691238253e-05 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 846 7349 ADDADEFGYSR True H1975_Epitope_Rep3 1244.4945600065598 1244.49346993586 33.246 2 0.3129505270028558 0.00039635354736424893 7.147189926535671e-05 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 142755 19274 YYQNYFEKL True PC9_epitope_Rep5 1266.5920892198599 1266.59098993586 79.18 2 0.31291935153776096 0.00039635354736424893 7.152296254604294e-05 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 5833 13056 APFDLFENK True H1975_Epitope_Rep1 1079.52876068731 1079.52766993586 55.306 2 0.3127970661353511 0.00039635354736424893 7.172361018415691e-05 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 57609 10662 LEEDEEELFK True NCI_RA007_Epitope_Rep2 1279.58197802863 1279.5808899358601 46.072 2 0.3126505683096164 0.00039635354736424893 7.196472726903405e-05 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF', 'ENST00000435265.5_1_22:20106640-20110140:+|nuORF'] 49860 5064 KIDKYTEVLK True NCI_RA007_Epitope_Rep5 1235.7125387057101 1235.71090490379 26.18 3 0.31247837899994485 0.00039635354736424893 7.224916596301424e-05 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF'] 118496 20146 TYQDIFRDF True PC9_epitope_Rep4 1203.5560380643099 1203.5549499358601 85.628 2 0.3124396016018293 0.00039635354736424893 7.231337712724498e-05 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 134306 10853 VYNSEYYHF True NCI_RA007_Epitope_Rep2 1220.5138388991602 1220.51274993586 46.82 2 0.3122595128572735 0.00039635354736424893 7.261233342443407e-05 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 77911 7095 NVIGLQM[Oxidation]GTNR True NCI_RA007_Epitope_Rep2 1217.61865578465 1217.61754993586 32.221 2 0.31218734861902075 0.00039635354736424893 7.273247629097149e-05 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 49158 7815 KELEPLKEMTA True H1975_Epitope_Rep1 1287.67443894483 1287.6733499358602 35.015 2 0.31216621071515244 0.00039635354736424893 7.276770543215777e-05 ['ENSG00000172081|ENST00000357066|MOB3A'] 105636 11435 SSDTADFRDLY True H1975_Epitope_Rep2 1288.55716026312 1288.55606993586 49.037 2 0.311987420447806 0.00039635354736424893 7.30663668043136e-05 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 55070 16059 KYTKIFNDF True PC9_epitope_Rep5 1174.60225998074 1174.60116993586 66.76 2 0.311958901286335 0.00039635354736424893 7.311412007379961e-05 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 54178 5763 KVTEGSFVYK True NCI_RA007_Epitope_Rep4 1156.61282466444 1156.61172993586 28.787 2 0.3119247900923513 0.00039635354736424893 7.317127779468688e-05 ['ENSG00000057608|ENST00000380191|GDI2'] 45977 13087 ISESIKELQFY True H1975_Epitope_Rep3 1355.6972825643898 1355.69618993586 55.582 2 0.3118944844221611 0.00039635354736424893 7.322209635778523e-05 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 133985 6606 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5281849037901 33.044 3 0.3118072438639104 0.00039635354736424893 7.33685842887324e-05 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 49377 6475 KESYSVYVYK True NCI_RA007_Epitope_Rep3 1264.6339540318397 1264.63231490379 32.5 3 0.3113735213232684 0.00039635354736424893 7.410122189503152e-05 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 104785 4262 SQYEVM[Oxidation]AEQNR True H1975_Epitope_Rep3 1369.5932288824497 1369.5921299358602 21.511 2 0.3109305266383299 0.00039635354736424893 7.485707607484838e-05 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 48890 3584 KEC[Carbamidomethyl]C[Carbamidomethyl]DKPLLEK True NCI_RA007_Epitope_Rep2 1418.6897722979995 1418.68813490379 18.59 3 0.31092415806278106 0.00039635354736424893 7.486799841819809e-05 ['CON__P02769'] 11417 7573 DETNYGIPQR True NCI_RA007_Epitope_Rep2 1191.5520153130299 1191.55090993586 34.083 2 0.3109158732747062 0.00039635354736424893 7.488220952273147e-05 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 72761 14162 M[Oxidation]NSFVNDIFER True NCI_RA007_Epitope_Rep1 1386.62380073474 1386.62270993586 59.121 2 0.31082862699567854 0.00039635354736424893 7.503202916262293e-05 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 141794 12663 YVDDASWMRY True H1975_Epitope_Rep2 1304.54957278488 1304.54846993586 53.808 2 0.31082786936459567 0.00039635354736424893 7.503333148177478e-05 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 54202 5931 KVVEGSFVYK True NCI_RA007_Epitope_Rep5 1154.6335601090198 1154.63191490379 29.5 3 0.31079334398808206 0.00039635354736424893 7.509270238224677e-05 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 74010 14168 NDEELNKLLGK True PC9_epitope_Rep5 1271.6721304457099 1271.6710299358601 59.508 2 0.3107366650407271 0.00039635354736424893 7.519027114850021e-05 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 120530 5117 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep5 1114.46008945458 1114.45898993586 26.38 2 0.3106895251419652 0.00039635354736424893 7.5271515700146e-05 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 27761 14543 FPTQALNFAFK True H1975_Epitope_Rep1 1282.6710082468996 1282.66990993586 61.144 2 0.3106528521231699 0.00039635354736424893 7.533478154079194e-05 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENSG00000169100|ENST00000381401|SLC25A6'] 113798 12442 TNAENEFVTIK True PC9_epitope_Rep2 1264.6299312805597 1264.62882993586 53.164 2 0.31056784600447224 0.00039635354736424893 7.548163301387808e-05 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 40264 20118 HQLENLSNFI True PC9_epitope_Rep5 1213.6091362663299 1213.60802993586 82.431 2 0.3103068301878514 0.00039635354736424893 7.593434004651849e-05 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2', 'ENST00000443067.1_1_1:166765603-166766044:+|nuORF'] 44849 9669 INEVENQILTR True NCI_RA007_Epitope_Rep1 1327.7095785835897 1327.7084899358601 41.609 2 0.31028087408548716 0.00039635354736424893 7.597950662145536e-05 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 137537 6276 YEEIDNAPEER True NCI_RA007_Epitope_Rep2 1363.5891886673896 1363.5880899358601 29.018 2 0.3102124388454988 0.00039635354736424893 7.609872060047048e-05 ['ENSG00000178952|ENST00000313511|TUFM'] 74914 14893 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69646993586 65.226 2 0.31015283997677806 0.00039635354736424893 7.620269405303137e-05 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 95293 6205 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.66362490379 31.414 3 0.3101461787617276 0.00039635354736424893 7.621432372773779e-05 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 131166 14179 VTEITDDLHFY True H1975_Epitope_Rep2 1351.6295969273901 1351.6284899358602 59.692 2 0.3101398470764196 0.00039635354736424893 7.622537972912343e-05 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 56788 11153 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 47.868 2 0.3099923652533667 0.00039635354736424893 7.648335781308479e-05 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 142749 19364 YYQNYFEKL True PC9_epitope_Rep1 1266.5920892198599 1266.59098993586 79.291 2 0.30981661670123434 0.00039635354736424893 7.679192127319585e-05 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 54024 12136 KVIDDTNITRL True PC9_epitope_Rep2 1286.7194149913 1286.71777490379 51.991 3 0.30948949522701125 0.00039635354736424893 7.736957120653231e-05 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 116291 13823 TTDLSFLDKY True H1975_Epitope_Rep2 1201.58666948625 1201.5855699358601 58.318 2 0.3091417212119815 0.00039635354736424893 7.798845790257652e-05 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'UBA6|p.Y611Tfs*17|1|0.45|ENSG00000033178|chr4:67635464-67635464|A/-|frameshift_variant', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 109767 8498 TEDQFIRTP True H1975_Epitope_Rep3 1105.54038800017 1105.53928993586 37.673 2 0.3090974503221836 0.00039635354736424893 7.806759533002789e-05 ['ENSG00000062822|ENST00000440232|POLD1'] 141245 9649 YTDFDGTRVY True H1975_Epitope_Rep1 1235.54586730343 1235.5447699358601 42.043 2 0.30905838938733765 0.00039635354736424893 7.813748628297976e-05 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 61537 4669 LKGDDLQAIKK True NCI_RA007_Epitope_Rep2 1227.7186867153098 1227.71704490379 22.787 3 0.30901215535998205 0.00039635354736424893 7.822029279375783e-05 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 46265 13253 ISPDQLADLYK True NCI_RA007_Epitope_Rep2 1261.6554177524097 1261.65432993586 56.185 2 0.3089258374038607 0.00039635354736424893 7.837512579548204e-05 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 16848 8346 EFDELNPSAQR True H1975_Epitope_Rep1 1304.5996937814398 1304.5985899358602 37.034 2 0.30874100251389497 0.00039635354736424893 7.870770557870865e-05 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2'] 44322 14066 ILDLISESPIK True H1975_Epitope_Rep1 1226.7122043525399 1226.7111099358601 59.271 2 0.3087290229411743 0.00039635354736424893 7.872930948312005e-05 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 113894 7729 TNQELQEINR True PC9_epitope_Rep1 1243.61567819875 1243.61458993586 34.55 2 0.30857869890455913 0.00039635354736424893 7.900090787093355e-05 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 48889 3251 KEC[Carbamidomethyl]C[Carbamidomethyl]DKPLLEK True NCI_RA007_Epitope_Rep2 1418.6897722979995 1418.68813490379 17.3 3 0.3084352383449733 0.00039635354736424893 7.926097959865534e-05 ['CON__P02769'] 88657 4591 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 22.764 2 0.3083244929002938 0.00039635354736424893 7.946232947087012e-05 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 52520 9686 KLDVQFSGLTK True NCI_RA007_Epitope_Rep2 1234.6921376142998 1234.69104993586 42.294 2 0.3083180805003465 0.00039635354736424893 7.947400372004068e-05 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 46646 14251 ITDLPDHLLSY True H1975_Epitope_Rep2 1285.6554177524101 1285.65432993586 59.967 2 0.3081740634308035 0.00039635354736424893 7.973664989038465e-05 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 24962 6626 FDDAVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep2 1269.55471811541 1269.55362993586 30.384 2 0.30804392724346513 0.00039635354736424893 7.99747279418766e-05 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 130929 12486 VTDGAILGKLY True H1975_Epitope_Rep2 1148.6441247927198 1148.64302993586 53.118 2 0.3079276988045431 0.00039635354736424893 8.018796348297354e-05 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant'] 54184 5518 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61172993586 27.912 2 0.30755341560751254 0.00039635354736424893 8.08785046606561e-05 ['ENSG00000057608|ENST00000380191|GDI2'] 14716 8693 DVLLQVDDERR True NCI_RA007_Epitope_Rep1 1356.69974217588 1356.69808490379 37.815 3 0.30751983532048727 0.00039635354736424893 8.094074929721757e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 68419 11663 LTEVDNYHFY True H1975_Epitope_Rep1 1299.5771674317102 1299.57606993586 49.851 2 0.3074945793323579 0.00039635354736424893 8.098759553007378e-05 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 134217 15393 VYMDWYEKF True NCI_RA007_Epitope_Rep5 1279.5583465634297 1279.55724993586 65.91 2 0.3074734055695251 0.00039635354736424893 8.10268907202026e-05 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 21949 9976 ESEDPNYYQY True H1975_Epitope_Rep2 1306.49897668066 1306.49786993586 43.361 2 0.30741931146220147 0.00039635354736424893 8.112736754002802e-05 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2'] 3214 6609 AGELTEDEVER True NCI_RA007_Epitope_Rep1 1246.5677249468197 1246.5666299358602 29.721 2 0.3072769439312556 0.00039635354736424893 8.139240342330775e-05 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 16077 9064 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.60916993586 39.261 2 0.30726758572718266 0.00039635354736424893 8.140985525702124e-05 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 38220 6589 HEAM[Oxidation]ITDLEER True NCI_RA007_Epitope_Rep2 1358.6136299738598 1358.61252993586 30.242 2 0.30708041555833526 0.00039635354736424893 8.175969044712227e-05 ['ENSG00000100345|ENST00000216181|MYH9'] 28534 8057 FSELAEDKENY True H1975_Epitope_Rep2 1343.5881260382298 1343.58702993586 35.94 2 0.30703710928840056 0.00039635354736424893 8.184084712030769e-05 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 106432 5590 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 28.98 3 0.30685047272615945 0.00039635354736424893 8.219153015639388e-05 ['ENSG00000058729|ENST00000283109|RIOK2'] 847 8058 ADDADEFGYSR True NCI_RA007_Epitope_Rep1 1244.4945600065598 1244.49346993586 35.34 2 0.3068173008720023 0.00039635354736424893 8.225401595007625e-05 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 142753 17922 YYQNYFEKL True PC9_epitope_Rep4 1266.5920892198599 1266.59098993586 76.986 2 0.3067461593871978 0.00039635354736424893 8.23881853884776e-05 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 141423 6383 YTETEPYHNY True H1975_Epitope_Rep1 1315.5356965425499 1315.5345899358601 29.612 2 0.3067010899365798 0.00039635354736424893 8.247329747064754e-05 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 89182 7636 QVSPEAGVQKV True PC9_epitope_Rep1 1140.6138872935999 1140.61278993586 34.195 2 0.30665208406649674 0.00039635354736424893 8.256594315820558e-05 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 19763 16600 ELSDFISYLQR True H1975_Epitope_Rep1 1369.68778050985 1369.6866899358602 69.229 2 0.30653081819181505 0.00039635354736424893 8.279564430072368e-05 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 24960 6241 FDDAVVQSDM[Oxidation]K True H1975_Epitope_Rep3 1269.55471811541 1269.55362993586 29.018 2 0.30651039304039396 0.00039635354736424893 8.283439636173071e-05 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 62198 5006 LLEQYKEESK True NCI_RA007_Epitope_Rep1 1265.6503323719696 1265.6486849037901 23.556 3 0.30637810215289596 0.00039635354736424893 8.308582780230276e-05 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 134025 10258 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5281849037901 44.444 3 0.30626578961151857 0.00039635354736424893 8.329988759544566e-05 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 26471 11821 FIDVDDERWHY True H1975_Epitope_Rep1 1493.65754301073 1493.6558849037901 50.464 3 0.30624325289574733 0.00039635354736424893 8.33429073989637e-05 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 12393 7318 DISTNYYASQK True NCI_RA007_Epitope_Rep2 1288.59354577184 1288.59244993586 33.087 2 0.3062111807608753 0.00039635354736424893 8.3404167460009e-05 ['ENSG00000166598|ENST00000299767|HSP90B1'] 137740 6371 YENEVALRQ True NCI_RA007_Epitope_Rep2 1120.5512870370399 1120.55018993586 29.389 2 0.30615261816316636 0.00039635354736424893 8.351614242797694e-05 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 43067 10562 IEVIEIM[Oxidation]TDR True NCI_RA007_Epitope_Rep2 1233.62748913285 1233.62638993586 45.681 2 0.30611653890033147 0.00039635354736424893 8.358520284979441e-05 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 12727 16621 DLEEFFSTVGK True H1975_Epitope_Rep3 1270.60813320682 1270.60702993586 69.437 2 0.30607914730983127 0.00039635354736424893 8.365683551877687e-05 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 139167 8459 YLDYHMEKY True H1975_Epitope_Rep2 1260.5485101557201 1260.54740993586 37.49 2 0.30602521103849384 0.00039635354736424893 8.376027173259183e-05 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 54358 12265 KYELDFSHF True NCI_RA007_Epitope_Rep4 1184.55022440788 1184.54912993586 54.173 2 0.3060092665292684 0.00039635354736424893 8.37908737870287e-05 ['ENSG00000137462|ENST00000642700|TLR2'] 48888 3167 KEC[Carbamidomethyl]C[Carbamidomethyl]DKPLLEK True NCI_RA007_Epitope_Rep2 1418.6897722979995 1418.68813490379 16.962 3 0.3055287278736863 0.00039635354736424893 8.471843094204972e-05 ['CON__P02769'] 14942 10322 DYETATLSDIK True H1975_Epitope_Rep3 1254.5979624459399 1254.59686993586 44.755 2 0.30549032674153725 0.00039635354736424893 8.479299623004854e-05 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 141278 19043 YTDLLRLFEY True H1975_Epitope_Rep2 1331.67615319699 1331.6750499358602 79.054 2 0.30537686941974573 0.00039635354736424893 8.501368540699388e-05 ['ENSG00000213639|ENST00000395366|PPP1CB'] 137199 12393 YAYDGKDYLAL True NCI_RA007_Epitope_Rep4 1290.6132185872598 1290.6121299358601 54.665 2 0.30537064869602054 0.00039635354736424893 8.502580212167551e-05 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 16654 6537 EEQLQQIRAE True NCI_RA007_Epitope_Rep5 1242.6204292260197 1242.6193299358602 31.807 2 0.30535689998716153 0.00039635354736424893 8.505258796123935e-05 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 141300 7148 YTDQFSRNY True H1975_Epitope_Rep2 1192.51490152832 1192.51380993586 32.43 2 0.3052701269530037 0.00039635354736424893 8.522183787362118e-05 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 141279 19131 YTDLLRLFEY True H1975_Epitope_Rep2 1331.67615319699 1331.6750499358602 79.405 2 0.30524216957249006 0.00039635354736424893 8.527644018719853e-05 ['ENSG00000213639|ENST00000395366|PPP1CB'] 48325 10747 IYSEEIVEM[Oxidation]YK True NCI_RA007_Epitope_Rep2 1418.66393421122 1418.6628299358601 46.403 2 0.30519049512181085 0.00039635354736424893 8.537745539159017e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 68421 11760 LTEVDNYHFY True H1975_Epitope_Rep2 1299.5771674317102 1299.57606993586 50.31 2 0.3051664401981012 0.00039635354736424893 8.54245197036489e-05 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 120896 13043 VENIQVFDFK True H1975_Epitope_Rep1 1237.6342883850095 1237.6331899358602 55.255 2 0.305132525990196 0.00039635354736424893 8.549091814772534e-05 ['nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000198074|ENST00000359579|AKR1B10', 'ENSG00000227471|ENST00000457545|AKR1B15'] 5819 10271 APELLYYANK True H1975_Epitope_Rep3 1180.61282466444 1180.61172993586 44.558 2 0.3050115005842052 0.00039635354736424893 8.572828713198792e-05 ['CON__P02769'] 63726 5715 LNDGSQITYEK True H1975_Epitope_Rep3 1266.60919583598 1266.60808993586 27.011 2 0.30491930919705307 0.00039635354736424893 8.59095458104223e-05 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 27706 7043 FPLTTESAM[Oxidation]K True NCI_RA007_Epitope_Rep5 1139.55326156343 1139.55216993586 33.769 2 0.30488720176587514 0.00039635354736424893 8.5972762614479e-05 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF'] 121561 4360 VFDPQNDKPSK True NCI_RA007_Epitope_Rep2 1273.63026563373 1273.62862490379 21.595 3 0.3046949249314805 0.00039635354736424893 8.635231432989943e-05 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000467622.2_1_12:110872962-110874052:-|nuORF', 'ENST00000397300.2_1_11:93921617-93921950:-|nuORF'] 142700 8409 YYQDTPKQI True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 37.716 2 0.30463060439891554 0.00039635354736424893 8.647965593196376e-05 ['ENSG00000048162|ENST00000614830|NOP16'] 54980 16467 KYQEVTNNLEF True PC9_epitope_Rep1 1383.6670450652698 1383.66594993586 68.165 2 0.3046298905581077 0.00039635354736424893 8.648107024538904e-05 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 49517 6985 KFIDTTSKF True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 34.584 2 0.3045359459993718 0.00039635354736424893 8.666740209319105e-05 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 141280 18761 YTDLLRLFEY True H1975_Epitope_Rep3 1331.67615319699 1331.6750499358602 78.682 2 0.304522526053801 0.00039635354736424893 8.669405229183397e-05 ['ENSG00000213639|ENST00000395366|PPP1CB'] 49084 5875 KEIEEYIHKP True H1975_Epitope_Rep2 1284.6714021697198 1284.66976490379 27.584 3 0.3044418342715421 0.00039635354736424893 8.685446819793861e-05 ['ENSG00000039123|ENST00000230640|MTREX'] 74921 16781 NHIEPLKIQL True PC9_epitope_Rep5 1203.6975573479099 1203.69646993586 69.554 2 0.3044159483254092 0.00039635354736424893 8.690599254690519e-05 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 92088 7722 RKWDTEIRL True NCI_RA007_Epitope_Rep3 1215.67240522923 1215.67075490379 37.497 3 0.3044060947704009 0.00039635354736424893 8.692561346272882e-05 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 54176 5346 KVTEGSFVYK True NCI_RA007_Epitope_Rep3 1156.61282466444 1156.61172993586 28.036 2 0.3043982857515609 0.00039635354736424893 8.694116633841874e-05 ['ENSG00000057608|ENST00000380191|GDI2'] 95652 8595 RYFDPANGKF True NCI_RA007_Epitope_Rep5 1213.5880068989297 1213.58635490379 39.738 3 0.30438329746980614 0.00039635354736424893 8.697102563246813e-05 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 55417 10099 LAEYDLDKY True H1975_Epitope_Rep2 1128.5339056373998 1128.53280993586 43.84 2 0.3042818489451865 0.00039635354736424893 8.71733988285227e-05 ['ENSG00000136045|ENST00000412830|PWP1', 'nc|ENSG00000136045|Q13610-2|PWP1'] 98043 9376 SEQLDLPVRQA True H1975_Epitope_Rep2 1254.65681473474 1254.6557099358602 41.027 2 0.3041612022509608 0.00039635354736424893 8.741468255330923e-05 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 32254 19496 GFAFVQYVNER True PC9_epitope_Rep2 1328.65133543148 1328.6502299358601 80.374 2 0.3039678954607294 0.00039635354736424893 8.780267421772925e-05 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant'] 73383 5878 MTESYEQEKY True H1975_Epitope_Rep2 1306.5387333176598 1306.5376299358602 27.595 2 0.30386676961540365 0.00039635354736424893 8.800633270611428e-05 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 141246 9675 YTDFDGTRVY True H1975_Epitope_Rep2 1235.54586730343 1235.5447699358601 42.196 2 0.3037890345472714 0.00039635354736424893 8.816320543375946e-05 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 20064 8848 EMEAELEDER True PC9_epitope_Rep4 1249.5132468458098 1249.5121499358602 41.565 2 0.3036905006197311 0.00039635354736424893 8.83624532406103e-05 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 140886 10220 YSEDLSDMHY True H1975_Epitope_Rep1 1258.48121844154 1258.48012993586 44.254 2 0.30360978292641544 0.00039635354736424893 8.852601002776216e-05 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 119138 10384 VAIEHLDKI True PC9_epitope_Rep4 1036.59169529704 1036.5905899358602 47.643 2 0.3035374618146568 0.00039635354736424893 8.867281019776973e-05 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 141247 9764 YTDFDGTRVY True H1975_Epitope_Rep2 1235.54586730343 1235.5447699358601 42.546 2 0.30352653930333967 0.00039635354736424893 8.869500228802498e-05 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 95036 3299 RTSEIYVHR True NCI_RA007_Epitope_Rep4 1159.6098049726697 1159.60816490379 18.406 3 0.3034919316934882 0.00039635354736424893 8.876535387839537e-05 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 53229 8570 KQFEKQVEL True PC9_epitope_Rep5 1147.6237237013097 1147.62262993586 37.906 2 0.3034846185610237 0.00039635354736424893 8.878022741942733e-05 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 95119 5386 RVEIM[Oxidation]EEESEQ True NCI_RA007_Epitope_Rep2 1393.60312485981 1393.6020299358602 25.569 2 0.30332897575598156 0.00039635354736424893 8.90973675672548e-05 ['nc|ENSG00000101557|P54578-2|USP14', 'nc|ENSG00000101557|P54578-3|USP14', 'ENSG00000101557|ENST00000261601|USP14', 'ENST00000578942.5_1_18:210315-211281:+|nuORF'] 134212 15751 VYMDWYEKF True NCI_RA007_Epitope_Rep1 1279.5583465634297 1279.55724993586 65.364 2 0.3031818229623899 0.00039635354736424893 8.939825055955589e-05 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 108523 17526 SYMLVNENRF True PC9_epitope_Rep5 1271.5968573304701 1271.59576993586 72.419 2 0.303161052853583 0.00039635354736424893 8.944080093862538e-05 ['ENSG00000182195|ENST00000370526|LDOC1'] 57608 11014 LEEDEEELFK True NCI_RA007_Epitope_Rep1 1279.58197802863 1279.5808899358601 46.837 2 0.3030589555102245 0.00039635354736424893 8.965025592273753e-05 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF', 'ENST00000435265.5_1_22:20106640-20110140:+|nuORF'] 133836 19134 VYGFQWRHF True PC9_epitope_Rep5 1238.5985120129797 1238.59687490379 78.633 3 0.30296235670497973 0.00039635354736424893 8.984888228931857e-05 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 46033 14207 ISGLIYEETR True PC9_epitope_Rep1 1179.6135529404298 1179.61244993586 59.47 2 0.302921961386133 0.00039635354736424893 8.99320735914428e-05 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 28864 11490 FTDEEGYGRYL True H1975_Epitope_Rep2 1348.59354577184 1348.59244993586 49.252 2 0.30281643732550273 0.00039635354736424893 9.014975668497337e-05 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 127313 12609 VM[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep1 1313.6325745132897 1313.6314699358602 53.027 2 0.3026899389048947 0.00039635354736424893 9.041140209713628e-05 ['CON__P02769'] 111760 5701 TIIQNPTDQQK True H1975_Epitope_Rep3 1284.66737941844 1284.66628993586 26.96 2 0.3026605680333399 0.00039635354736424893 9.047226048865803e-05 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000552528.1_1_12:56503657-56504297:+|nuORF'] 112184 4741 TKFETEQALR True NCI_RA007_Epitope_Rep5 1221.6353510141698 1221.6337049037902 24.919 3 0.3026297005863711 0.00039635354736424893 9.053626405192686e-05 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF'] 130820 6879 VTAQVVGTERY True H1975_Epitope_Rep3 1221.6353510141698 1221.63424993586 31.419 2 0.30251490972311035 0.00039635354736424893 9.07746802853542e-05 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF'] 134307 10463 VYNSEYYHF True NCI_RA007_Epitope_Rep4 1220.5138388991602 1220.51274993586 47.095 2 0.30242277620552127 0.00039635354736424893 9.096649237422602e-05 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 84652 13017 QDGQFSVLFTK True NCI_RA007_Epitope_Rep2 1268.6401020414398 1268.63900993586 55.258 2 0.3022839177154385 0.00039635354736424893 9.125634718936151e-05 ['CON__P12763'] 141277 18947 YTDLLRLFEY True H1975_Epitope_Rep1 1331.67615319699 1331.6750499358602 79.001 2 0.3022543268929231 0.00039635354736424893 9.13182347441763e-05 ['ENSG00000213639|ENST00000395366|PPP1CB'] 17520 8086 EHFQDDVFNEK True NCI_RA007_Epitope_Rep2 1406.6102584651396 1406.6086049037901 36.085 3 0.3022004374060289 0.00039635354736424893 9.143104948281578e-05 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 108558 16394 SYNNFFRMF True NCI_RA007_Epitope_Rep4 1224.53861417836 1224.53750993586 71.062 2 0.3021269189894578 0.00039635354736424893 9.158518122242789e-05 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 142704 8092 YYQDTPKQI True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 38.576 2 0.30209216576348924 0.00039635354736424893 9.165813199518192e-05 ['ENSG00000048162|ENST00000614830|NOP16'] 16081 8697 EEAENTLQSFR True NCI_RA007_Epitope_Rep2 1322.61025846514 1322.60916993586 38.477 2 0.30208876777806076 0.00039635354736424893 9.166526785245956e-05 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 32338 14712 GFGFVTFDDHD True H1975_Epitope_Rep1 1255.51456717515 1255.51346993586 61.808 2 0.3020828017657943 0.00039635354736424893 9.167779797709134e-05 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 56716 16614 LDLDGIIAEVK True NCI_RA007_Epitope_Rep2 1184.66525416012 1184.66414993586 69.355 2 0.3020526168017129 0.00039635354736424893 9.174122025660782e-05 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 106964 9771 SVEEISTLVQK True NCI_RA007_Epitope_Rep4 1231.6659824361097 1231.6648899358602 44.433 2 0.3017684995299946 0.00039635354736424893 9.23403403646853e-05 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 46524 14818 ISYGPDWKDFY True H1975_Epitope_Rep3 1389.6241176241301 1389.6230299358601 62.378 2 0.3016405730435994 0.00039635354736424893 9.261137632700208e-05 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000566672.5_1_15:72638574-72647950:-|nuORF'] 78102 6392 NVYYNEATGGK True NCI_RA007_Epitope_Rep1 1214.5567663402996 1214.5556699358601 28.888 2 0.30162940350405304 0.00039635354736424893 9.263507881123394e-05 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF'] 131124 9988 VTEFEDIKSGY True H1975_Epitope_Rep2 1286.6030478263797 1286.6019499358601 43.409 2 0.3016171052711082 0.00039635354736424893 9.266118347564456e-05 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 53301 13145 KQLDDLKVEL True PC9_epitope_Rep6 1199.6761531969898 1199.6745149037902 62.204 3 0.30157899492605705 0.00039635354736424893 9.274212459110218e-05 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 15147 7156 EAAENSLVAYK True H1975_Epitope_Rep3 1193.5928174958497 1193.59172993586 32.498 2 0.3015603711933391 0.00039635354736424893 9.278170455552909e-05 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE'] 84644 12452 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 52.933 2 0.3015472335412147 0.00039635354736424893 9.280963542838206e-05 ['CON__P12763'] 39337 6881 HIYYITGETK True NCI_RA007_Epitope_Rep2 1223.6186383208699 1223.61754993586 31.383 2 0.3014991856684386 0.00039635354736424893 9.291185768568999e-05 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 64877 9097 LQEAEEWYK True NCI_RA007_Epitope_Rep2 1194.55570371114 1194.55460993586 39.989 2 0.30141440608848236 0.00039635354736424893 9.309250175885741e-05 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 63881 9555 LNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 1088.58998142532 1088.5888899358602 41.164 2 0.3014046576607731 0.00039635354736424893 9.311329573061967e-05 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 56712 16183 LDLDGIIAEVK True H1975_Epitope_Rep1 1184.66525416012 1184.66414993586 67.593 2 0.301371344717698 0.00039635354736424893 9.318438928248062e-05 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 126033 10902 VLDYDTSHIY True H1975_Epitope_Rep2 1224.56626839484 1224.56516993586 46.965 2 0.3012060633512239 0.00039635354736424893 9.353792215480135e-05 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF'] 120531 5212 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep5 1114.46008945458 1114.45898993586 26.744 2 0.3011174917112336 0.00039635354736424893 9.372792665855751e-05 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 84656 19390 QDGQFSVLFTK True PC9_epitope_Rep5 1268.6401020414398 1268.63900993586 79.629 2 0.3010925232191603 0.00039635354736424893 9.378155897728861e-05 ['CON__P12763'] 49375 7175 KESYSVYVYK True NCI_RA007_Epitope_Rep2 1264.6339540318397 1264.63231490379 32.53 3 0.301000637101288 0.00039635354736424893 9.397919488521603e-05 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 140860 7589 YSDSLVQKGY True H1975_Epitope_Rep3 1158.5557037111398 1158.55460993586 34.172 2 0.3009952916825931 0.00039635354736424893 9.399070505013439e-05 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 22144 5121 ESSAGGSFTVR True NCI_RA007_Epitope_Rep3 1096.51490152832 1096.51380993586 27.137 2 0.30089672998088424 0.00039635354736424893 9.42031885831299e-05 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 141248 9623 YTDFDGTRVY True H1975_Epitope_Rep3 1235.54586730343 1235.5447699358601 42.03 2 0.300714907011281 0.00039635354736424893 9.459643213827934e-05 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 22915 9745 EVEDVVM[Oxidation]VNVR True NCI_RA007_Epitope_Rep1 1303.64420182615 1303.6431099358601 41.907 2 0.30060942676180286 0.00039635354736424893 9.482531528136186e-05 ['ENSG00000134001|ENST00000256383|EIF2S1', 'ENST00000556724.1_1_14:67827147-67841270:+|nuORF'] 95662 13880 RYFDPANGKF True PC9_epitope_Rep3 1213.5880068989297 1213.5869099358601 58.47 2 0.3005937352032177 0.00039635354736424893 9.485941193463372e-05 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 72765 9237 M[Oxidation]NTFSVVPSPK True NCI_RA007_Epitope_Rep2 1221.60635976545 1221.6052699358602 40.541 2 0.3005552197638936 0.00039635354736424893 9.494315528766206e-05 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 141435 11032 YTFGTKEPLY True H1975_Epitope_Rep2 1217.5968402471299 1217.59574993586 47.464 2 0.30052940543142165 0.00039635354736424893 9.499932427233156e-05 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 22868 6827 EVDEDFDSK True PC9_epitope_Rep5 1082.44039917538 1082.4393099358601 31.232 2 0.3004529161554246 0.00039635354736424893 9.516595131108834e-05 ['ENSG00000142634|ENST00000375980|EFHD2'] 66226 4864 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 23.797 2 0.30042829512374564 0.00039635354736424893 9.521964885068168e-05 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 42271 18759 IDTIEIITDR True PC9_epitope_Rep5 1187.63976768827 1187.6386699358602 77.167 2 0.3002350367403564 0.00039635354736424893 9.564219223127407e-05 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 141415 13063 YTEPNYWIRY True H1975_Epitope_Rep2 1403.65100107831 1403.64990993586 55.369 2 0.3001173520937081 0.00039635354736424893 9.590041839043115e-05 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 22321 8749 ETDNMFNRY True H1975_Epitope_Rep2 1188.48697252832 1188.4858699358601 38.615 2 0.3000173229436506 0.00039635354736424893 9.612045281213282e-05 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 53403 19075 KQVEEIFNLKF True PC9_epitope_Rep4 1393.7605515272896 1393.7589149037901 81.462 3 0.29997929984713056 0.00039635354736424893 9.620422475662552e-05 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 53675 7290 KSDVEAIFSK True NCI_RA007_Epitope_Rep3 1122.5920892198599 1122.59098993586 35.785 2 0.29997775834713886 0.00039635354736424893 9.620762250769963e-05 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 97113 4937 [Acetylation]-SDKPDM[Oxidation]AEIEK True NCI_RA007_Epitope_Rep2 1319.5914978632497 1319.59038993586 23.825 2 0.2999354578309129 0.00039635354736424893 9.630090753396173e-05 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 68014 11632 LTDIFQHDTY True H1975_Epitope_Rep1 1251.57716743171 1251.57606993586 49.733 2 0.29987845108691147 0.00039635354736424893 9.642676727096576e-05 ['ENSG00000164366|ENST00000296824|CCDC127'] 2301 7559 AENYDIPSADR True NCI_RA007_Epitope_Rep1 1249.55749461629 1249.5563899358601 33.395 2 0.29968425285243255 0.00039635354736424893 9.685675549084421e-05 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 14239 15512 DSLIFLVDASK True H1975_Epitope_Rep1 1206.6496040959798 1206.6485099358601 64.94 2 0.2996257703865404 0.00039635354736424893 9.698662115767931e-05 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant', 'ENST00000464116.2_1_22:42018008-42024264:+|nuORF'] 82068 9864 PM[Oxidation]FIVNTNVPR True H1975_Epitope_Rep1 1302.6754423847801 1302.6743499358602 42.876 2 0.2995287793274652 0.00039635354736424893 9.720238283297974e-05 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 102935 10156 SPDQLADLYK True H1975_Epitope_Rep1 1148.5713537752797 1148.5702499358601 44.004 2 0.29952113204993586 0.00039635354736424893 9.72194150117844e-05 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 68418 11570 LTEVDNYHFY True H1975_Epitope_Rep1 1299.5771674317102 1299.57606993586 49.49 2 0.29948146335626746 0.00039635354736424893 9.730781389670761e-05 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 41704 22404 IAIYELLFK True PC9_epitope_Rep1 1108.6532329244399 1108.65212993586 90.996 2 0.2994614611603662 0.00039635354736424893 9.735241787212954e-05 ['ENSG00000124614|ENST00000648437|RPS10', 'chr6:34425221-34425583|540|24.75|0.0|21.24|-|ENST00000494077|RPS10-NUDT3,RPS10'] 73991 9203 NDEELNKLLGK True H1975_Epitope_Rep1 1271.6721304457099 1271.6710299358601 40.306 2 0.2994545247535581 0.00039635354736424893 9.736789051609083e-05 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 84648 12578 QDGQFSVLFTK True H1975_Epitope_Rep3 1268.6401020414398 1268.63900993586 53.583 2 0.29941964446150454 0.00039635354736424893 9.744573327951493e-05 ['CON__P12763'] 133771 9409 VYERELQTF True NCI_RA007_Epitope_Rep4 1183.5873381925899 1183.58624993586 43.05 2 0.29936615116926296 0.00039635354736424893 9.756523588117242e-05 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 12726 16630 DLEEFFSTVGK True H1975_Epitope_Rep1 1270.60813320682 1270.60702993586 69.347 2 0.2993277752638219 0.00039635354736424893 9.765105695421613e-05 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 95294 6296 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.66362490379 31.768 3 0.29928085629862916 0.00039635354736424893 9.775608572889111e-05 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 25611 11593 FEM[Oxidation]SDFIVDTR True NCI_RA007_Epitope_Rep2 1374.6125673446998 1374.6114699358602 49.684 2 0.29927175285561686 0.00039635354736424893 9.777647700416984e-05 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 140857 7603 YSDSLVQKGY True H1975_Epitope_Rep2 1158.5557037111398 1158.55460993586 34.197 2 0.2991927152617176 0.00039635354736424893 9.795369638264393e-05 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 75577 10714 NLDEEKQLLY True H1975_Epitope_Rep1 1263.63468230783 1263.63358993586 46.173 2 0.29906590732127664 0.00039635354736424893 9.823869887522569e-05 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6'] 74883 5021 NHHLQETSF True PC9_epitope_Rep4 1111.50467119779 1111.50356993586 25.939 2 0.2990001513775451 0.00039635354736424893 9.838681270870786e-05 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 32258 14512 GFAFVTFDDHD True NCI_RA007_Epitope_Rep3 1269.5302172392899 1269.52912993586 64.389 2 0.29866446165104427 0.00039635354736424893 9.914643542667596e-05 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 118494 20859 TYQDIFRDF True PC9_epitope_Rep2 1203.5560380643099 1203.5549499358601 85.679 2 0.2986619322145467 0.00039635354736424893 9.915218143365513e-05 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 108512 10972 SYMLVNENRF True NCI_RA007_Epitope_Rep3 1271.5968573304701 1271.59576993586 50.247 2 0.29863373553161754 0.00039635354736424893 9.921625713108749e-05 ['ENSG00000182195|ENST00000370526|LDOC1'] 137202 12654 YAYDGKDYLAL True NCI_RA007_Epitope_Rep5 1290.6132185872598 1290.6121299358601 55.328 2 0.29858264940581986 0.00039635354736424893 9.933245360608679e-05 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 61900 13554 LLDEAQRLLY True H1975_Epitope_Rep3 1232.67648755016 1232.67538993586 57.417 2 0.298563813721867 0.00039635354736424893 9.93753301141554e-05 ['ENSG00000083817|ENST00000196489|ZNF416', 'ZIK1|p.K218Rfs*65|1|0.71|ENSG00000171649|chr19:57590460-57590460|G/-|frameshift_variant', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 128018 12173 VPIYEGYALPH True H1975_Epitope_Rep1 1257.63937376545 1257.63826993586 51.842 2 0.29851966105896066 0.00039635354736424893 9.94759093816996e-05 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 141795 12447 YVDDASWMRY True H1975_Epitope_Rep3 1304.54957278488 1304.54846993586 53.07 2 0.29849771364670435 0.00039635354736424893 9.952594322939588e-05 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 126091 12262 VLELVSITANK True NCI_RA007_Epitope_Rep2 1185.69688864157 1185.6957899358601 52.297 2 0.29848394360108665 0.00039635354736424893 9.955734786429046e-05 ['ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 102936 10124 SPDQLADLYK True H1975_Epitope_Rep3 1148.5713537752797 1148.5702499358601 43.985 2 0.2984743160194307 0.00039635354736424893 9.95793108837623e-05 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 22983 5760 EVEVEVESM[Oxidation]DK True H1975_Epitope_Rep3 1308.5755131296398 1308.57440993586 27.182 2 0.2983147103976578 0.00039635354736424893 9.994411998154041e-05 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 68422 11862 LTEVDNYHFY True H1975_Epitope_Rep2 1299.5771674317102 1299.57606993586 50.705 2 0.29830956603183567 0.00039635354736424893 9.995590062907638e-05 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 41265 6846 HVLVTLGEK True PC9_epitope_Rep4 994.58113061334 994.58002993586 33.553 2 0.2982724637403417 0.00039635354736424893 0.0001000409063897807 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 136771 18890 WYQTKFETL True PC9_epitope_Rep5 1214.5971746002997 1214.5960699358602 77.68 2 0.2982458453771058 0.00039635354736424893 0.00010010193678079002 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 66230 5244 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 25.237 2 0.29814089525316817 0.00039635354736424893 0.00010034292886495722 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 105635 11343 SSDTADFRDLY True H1975_Epitope_Rep2 1288.55716026312 1288.55606993586 48.679 2 0.2980409528171209 0.00039635354736424893 0.00010057296160647983 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 49081 5771 KEIEEYIHKP True H1975_Epitope_Rep1 1284.6714021697198 1284.66976490379 27.268 3 0.29800728268734317 0.00039635354736424893 0.00010065057729741547 ['ENSG00000039123|ENST00000230640|MTREX'] 4868 4955 ALEQQVEEM[Oxidation]K True H1975_Epitope_Rep3 1219.5754535599897 1219.57434993586 24.187 2 0.29800401369866103 0.00039635354736424893 0.00010065811609391024 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 114013 8983 TPAQFDADELR True H1975_Epitope_Rep1 1261.5938801250097 1261.59278993586 39.459 2 0.297921081864615 0.00039635354736424893 0.00010084955889081761 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 141793 12571 YVDDASWMRY True H1975_Epitope_Rep2 1304.54957278488 1304.54846993586 53.448 2 0.2977828143026108 0.00039635354736424893 0.00010116955100538164 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 45697 13238 IRLENEIQTYR True PC9_epitope_Rep5 1433.76267678561 1433.76103490379 55.928 3 0.29775830186000085 0.00039635354736424893 0.00010122638598117031 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 73385 5950 MTESYEQEKY True H1975_Epitope_Rep3 1306.5387333176598 1306.5376299358602 27.898 2 0.2977002319116944 0.00039635354736424893 0.00010136115548799074 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 12234 11570 DIISDTSGDFR True NCI_RA007_Epitope_Rep2 1224.5622456435601 1224.5611499358602 49.595 2 0.29758734507440343 0.00039635354736424893 0.00010162365868446793 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 49533 11626 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 49.734 2 0.29758164723155545 0.00039635354736424893 0.00010163692627126244 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 35824 12480 GTLDYILQR True NCI_RA007_Epitope_Rep1 1077.5818588893299 1077.5807699358602 52.522 2 0.2975367321143007 0.00039635354736424893 0.00010174157307626444 ['ENSG00000140718|ENST00000471389|FTO'] 41074 8623 HTMEFALVK True NCI_RA007_Epitope_Rep4 1074.55320161334 1074.55210993586 39.951 2 0.29752482493499477 0.00039635354736424893 0.00010176933344094268 ['ENSG00000182636|ENST00000649030|NDN'] 66227 4957 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 24.15 2 0.29742067340677947 0.00039635354736424893 0.00010201247531053453 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 52704 8901 KMDDLNLHY True H1975_Epitope_Rep2 1147.53319444475 1147.53208993586 39.205 2 0.2973790105892553 0.00039635354736424893 0.00010210989988266058 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 62016 8857 LLDQGQLNKY True H1975_Epitope_Rep3 1190.62953735774 1190.62844993586 39.074 2 0.29729480188516344 0.00039635354736424893 0.0001023070983274558 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 54613 18171 KYLDEDTIYHL True PC9_epitope_Rep5 1408.68744615668 1408.68634993586 74.904 2 0.29727362768817106 0.00039635354736424893 0.00010235674360897104 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 37529 6746 GVVEVTHDLQK True NCI_RA007_Epitope_Rep2 1223.6510010783097 1223.64990993586 30.854 2 0.2972680042386463 0.00039635354736424893 0.00010236993246790867 ['ENSG00000149257|ENST00000358171|SERPINH1'] 54179 5851 KVTEGSFVYK True NCI_RA007_Epitope_Rep4 1156.61282466444 1156.61172993586 29.129 2 0.29724654653314014 0.00039635354736424893 0.00010242027354637469 ['ENSG00000057608|ENST00000380191|GDI2'] 54612 18162 KYLDEDTIYHL True PC9_epitope_Rep5 1408.68744615668 1408.68580490379 74.869 3 0.2971045123124836 0.00039635354736424893 0.00010275411961907432 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 141416 13158 YTEPNYWIRY True H1975_Epitope_Rep2 1403.65100107831 1403.64990993586 55.736 2 0.2970934098212753 0.00039635354736424893 0.00010278026144009127 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 56619 9978 LDIDSPPITAR True H1975_Epitope_Rep1 1196.6401020414398 1196.63900993586 43.317 2 0.2969909846555231 0.00039635354736424893 0.00010302174485709278 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 116334 6163 TTESQELSRY True H1975_Epitope_Rep3 1212.56224564356 1212.5611499358602 28.718 2 0.29695269941676 0.00039635354736424893 0.00010311215400319899 ['ENSG00000151503|ENST00000534548|NCAPD3'] 57603 7176 LEEANTELEVK True H1975_Epitope_Rep1 1273.64016161109 1273.63906993586 32.625 2 0.29691577517897055 0.00039635354736424893 0.00010319942439772164 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF'] 95299 6403 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.66362490379 31.301 3 0.2969064506414426 0.00039635354736424893 0.00010322147461718516 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 46523 14960 ISYGPDWKDFY True H1975_Epitope_Rep2 1389.6241176241301 1389.6230299358601 62.695 2 0.29684041161948094 0.00039635354736424893 0.00010337777550685109 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000566672.5_1_15:72638574-72647950:-|nuORF'] 95300 6496 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.66362490379 31.653 3 0.29680188952960357 0.00039635354736424893 0.00010346905876617619 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 48771 9014 KDLEALLNSK True NCI_RA007_Epitope_Rep2 1129.63428838501 1129.6331899358602 39.663 2 0.2967524638280892 0.00039635354736424893 0.00010358629772612112 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 71193 6517 LYNYYDDEKEK True NCI_RA007_Epitope_Rep1 1478.6565399512199 1478.6548949037901 29.364 3 0.2967376569027092 0.00039635354736424893 0.00010362144597836626 ['ENSG00000149257|ENST00000358171|SERPINH1'] 106204 12939 STDVSDLLHQY True H1975_Epitope_Rep2 1276.5935457718401 1276.59244993586 54.884 2 0.29672611132122406 0.00039635354736424893 0.00010364886082627012 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 15299 6339 EAFNM[Oxidation]IDQNR True H1975_Epitope_Rep3 1252.5506357944798 1252.5495299358602 29.373 2 0.2966281818684227 0.00039635354736424893 0.00010388168518791245 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 63800 9045 LNGTDPEDVIR True NCI_RA007_Epitope_Rep1 1227.60953018915 1227.6084299358602 39.186 2 0.296609251574176 0.00039635354736424893 0.00010392675171640918 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 93484 6278 RQIPYTMMK True NCI_RA007_Epitope_Rep3 1166.5940208795 1166.5929299358602 31.697 2 0.29643981057516666 0.00039635354736424893 0.0001043310047074572 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'SLC25A3|p.A284Lfs*8|1|0.17|ENSG00000075415|chr12:98601203-98601203|G/-|frameshift_variant'] 52677 12826 KLVIIESDLER True PC9_epitope_Rep4 1313.75546614685 1313.75383490379 57.198 3 0.29640548603299705 0.00039635354736424893 0.00010441308777813576 ['ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 14196 9540 DSDYHDENMYY True H1975_Epitope_Rep2 1450.49832505766 1450.49722993586 41.667 2 0.2963817613735125 0.00039635354736424893 0.00010446986024937215 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 56119 15010 LAVDAVIAELK True H1975_Epitope_Rep1 1140.675424921 1140.6743299358602 62.982 2 0.2963066482425397 0.00039635354736424893 0.00010464980772190761 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 46659 9426 ITDPDPDIRY True H1975_Epitope_Rep2 1203.57716743171 1203.57606993586 41.224 2 0.29621752830559456 0.00039635354736424893 0.00010486371341932664 ['ENSG00000198793|ENST00000361445|MTOR'] 134265 13260 VYNENLVHM[Oxidation]I True PC9_epitope_Rep4 1246.60160873818 1246.6005099358601 58.903 2 0.2961606662704555 0.00039635354736424893 0.00010500042224598922 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 116318 8556 TTEESLRNYY True H1975_Epitope_Rep2 1274.5778957077 1274.57678993586 37.867 2 0.29613361669098104 0.00039635354736424893 0.00010506551795710045 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 115755 6532 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 30.036 2 0.29607663860082833 0.00039635354736424893 0.00010520276976492682 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 13782 19891 DQIAKYWEL True PC9_epitope_Rep4 1164.5815245361598 1164.5804299358601 84.643 2 0.29602805242993785 0.00039635354736424893 0.00010531994838185784 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 134203 19437 VYLQNWSHVL True PC9_epitope_Rep4 1257.65060715549 1257.6495099358601 82.877 2 0.2959362613609047 0.00039635354736424893 0.00010554168376668506 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 25985 10018 FGEENIEVYHS True H1975_Epitope_Rep3 1322.5778957077 1322.57678993586 43.572 2 0.2959344610807969 0.00039635354736424893 0.00010554603728619224 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 58499 7490 LEQEIATYR True NCI_RA007_Epitope_Rep1 1121.57168812845 1121.5705899358602 33.126 2 0.2958493992490494 0.00039635354736424893 0.00010575194263529686 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 19363 12800 ELLLQPVTISR True H1975_Epitope_Rep1 1267.74998684359 1267.74888993586 54.299 2 0.29581024747703694 0.00039635354736424893 0.00010584685059324347 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'nc|ENSG00000241553|P59998-2|ARPC4'] 119910 5977 VDKLDASESLR True NCI_RA007_Epitope_Rep2 1231.64083031743 1231.63918490379 27.858 3 0.2957902069597195 0.00039635354736424893 0.00010589546385884645 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 7498 6995 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64520993586 31.829 2 0.29578431464527294 0.00039635354736424893 0.00010590976138432137 ['ENSG00000163584|ENST00000295830|RPL22L1'] 125938 7492 VLDEADEM[Oxidation]LSR True NCI_RA007_Epitope_Rep2 1292.59183190012 1292.59072993586 33.768 2 0.2957467875218175 0.00039635354736424893 0.0001060008651661299 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 24881 14371 FAYDGKDYLTL True H1975_Epitope_Rep2 1304.6288686513997 1304.6277699358602 60.427 2 0.29574657900862206 0.00039635354736424893 0.00010600137158807525 ['ENSG00000204592|ENST00000376630|HLA-E'] 58063 12401 LEINFNTLQTK True H1975_Epitope_Rep1 1319.7085159544301 1319.7074099358601 52.734 2 0.2955534213207315 0.00039635354736424893 0.00010647154054511311 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 9121 15095 AVIVLVENFYK True NCI_RA007_Epitope_Rep4 1293.7332741502898 1293.7321699358602 65.628 2 0.2954646603649925 0.00039635354736424893 0.00010668829453935609 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 2392 5561 AEQEEEVQRAV True H1975_Epitope_Rep2 1286.61025846514 1286.60916993586 26.398 2 0.29534872897558206 0.00039635354736424893 0.00010697206373624308 ['ENST00000531121.5_1_11:65686926-65687405:+|nuORF'] 137196 12802 YAYDGKDYLAL True NCI_RA007_Epitope_Rep2 1290.6132185872598 1290.6121299358601 54.414 2 0.2953143903880678 0.00039635354736424893 0.00010705626034711844 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 141389 6934 YTEFTPTEKDE True H1975_Epitope_Rep3 1358.5877916850598 1358.58668993586 31.633 2 0.2953120640372079 0.00039635354736424893 0.00010706196684837892 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 73662 18081 MYINEVERL True PC9_epitope_Rep1 1165.58014463717 1165.5790499358602 74.341 2 0.29527203211929465 0.00039635354736424893 0.0001071602121946423 ['PTPN14|p.Y570Ifs*131|1|0.11|ENSG00000152104|chr1:214384147-214384148|-/T|frameshift_variant', 'ENSG00000152104|ENST00000366956|PTPN14'] 39721 8401 HLVDEPQNLIK True H1975_Epitope_Rep3 1304.7088503076 1304.7072149037901 37.298 3 0.2952495000493117 0.00039635354736424893 0.00010721554951625746 ['CON__P02769'] 130928 12343 VTDGAILGKLY True H1975_Epitope_Rep1 1148.6441247927198 1148.64302993586 52.508 2 0.2951630103946766 0.00039635354736424893 0.00010742822822714264 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant'] 114016 13406 TPAQFDADELR True PC9_epitope_Rep1 1261.5938801250097 1261.59278993586 56.428 2 0.29502736104107696 0.00039635354736424893 0.00010776264155228482 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 25610 11262 FEM[Oxidation]SDFIVDTR True H1975_Epitope_Rep3 1374.6125673446998 1374.6114699358602 48.422 2 0.29490219887187696 0.00039635354736424893 0.00010807212492217373 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 142485 22052 YYIDADLLREI True PC9_epitope_Rep5 1382.7081816012599 1382.70708993586 89.85 2 0.29490041469482203 0.00039635354736424893 0.0001080765430067426 ['ENSG00000138750|ENST00000264883|NUP54', 'nc|ENSG00000138750|Q7Z3B4-3|NUP54', 'nc|ENSG00000138750|Q7Z3B4-2|NUP54'] 14194 9381 DSDYHDENMYY True H1975_Epitope_Rep1 1450.49832505766 1450.49722993586 40.993 2 0.2948912531642793 0.00039635354736424893 0.0001080992321763391 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 137197 12133 YAYDGKDYLAL True NCI_RA007_Epitope_Rep3 1290.6132185872598 1290.6121299358601 54.839 2 0.29481479148562856 0.00039635354736424893 0.00010828878083581283 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 13086 13009 DLQFVEVTDVK True H1975_Epitope_Rep3 1291.6659824361102 1291.6648899358602 55.273 2 0.29481108104823434 0.00039635354736424893 0.00010829798747389298 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 86591 6289 QLEEAEEEAQR True PC9_epitope_Rep5 1330.60008770426 1330.5989899358601 29.167 2 0.29476775080385426 0.00039635354736424893 0.00010840555998508276 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 19764 16587 ELSDFISYLQR True H1975_Epitope_Rep3 1369.68778050985 1369.6866899358602 69.298 2 0.2947167062090812 0.00039635354736424893 0.000108532421465017 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 108521 16103 SYMLVNENRF True PC9_epitope_Rep4 1271.5968573304701 1271.59576993586 69.878 2 0.29463352655799807 0.00039635354736424893 0.00010873946676412345 ['ENSG00000182195|ENST00000370526|LDOC1'] 22427 6692 ETEREYFNRY True H1975_Epitope_Rep2 1405.6262428824498 1405.62460490379 30.65 3 0.29462278813123843 0.00039635354736424893 0.00010876622493608242 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 8185 9094 ATEVDSRWQEY True H1975_Epitope_Rep2 1382.6102584651399 1382.60916993586 39.931 2 0.29457819695750165 0.00039635354736424893 0.00010887740838926169 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'MACF1|p.S820Afs*39|1|0.14|ENSG00000127603|chr1:39297705-39297705|C/-|frameshift_variant', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 63879 8940 LNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1088.58998142532 1088.5888899358602 39.292 2 0.2945142602360856 0.00039635354736424893 0.0001090370264162057 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 99173 5680 SHITPSTQQHL True PC9_epitope_Rep1 1247.62584895963 1247.62420490379 26.671 3 0.2943848049472322 0.00039635354736424893 0.00010936092890924702 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 4871 5324 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep2 1219.5754535599897 1219.57434993586 25.331 2 0.2943400174463595 0.00039635354736424893 0.0001094732131087628 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 136846 11396 YADNQVMHFY True H1975_Epitope_Rep3 1286.5390081011801 1286.5379099358602 48.948 2 0.2942223294084847 0.00039635354736424893 0.00010976881222930715 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 17592 8672 EHINEGETAM[Oxidation]L True PC9_epitope_Rep2 1258.5499670881397 1258.54886993586 38.722 2 0.29421652206087684 0.00039635354736424893 0.0001097834193066814 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 116289 13210 TTDLFGRDLSY True H1975_Epitope_Rep3 1286.6142812164198 1286.6131899358602 56.066 2 0.29409873741483 0.00039635354736424893 0.00011008010023333998 ['ENSG00000169813|ENST00000682386|HNRNPF'] 65935 5554 LSDSGVTQRY True H1975_Epitope_Rep2 1124.5462016566 1124.5451099358602 26.371 2 0.2940980364294693 0.00039635354736424893 0.00011008186830412144 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF'] 128019 12266 VPIYEGYALPH True H1975_Epitope_Rep1 1257.63937376545 1257.63826993586 52.205 2 0.2940936545734102 0.00039635354736424893 0.00011009292114992766 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 130901 5793 VTDDSPKYNY True H1975_Epitope_Rep2 1200.5298828861198 1200.52878993586 27.275 2 0.29405349774725414 0.00039635354736424893 0.00011019426493901319 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 63798 8380 LNGTDPEDVIR True H1975_Epitope_Rep1 1227.60953018915 1227.6084299358602 37.162 2 0.29400817508178584 0.00039635354736424893 0.0001103087578952289 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 111594 9192 TIDDLEDKLK True NCI_RA007_Epitope_Rep1 1188.62378327096 1188.6221249037899 39.756 3 0.29397416317961755 0.00039635354736424893 0.00011039475606537873 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 3217 5972 AGELTEDEVER True NCI_RA007_Epitope_Rep5 1246.5677249468197 1246.5666299358602 29.655 2 0.29394579863464637 0.00039635354736424893 0.00011046652634731901 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 100886 9624 SLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep2 1204.5434251557197 1204.5423299358602 42.05 2 0.29380757924565454 0.00039635354736424893 0.00011081692895206876 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 75860 15818 NLQEAEEWYK True PC9_epitope_Rep5 1308.59863115228 1308.5975299358602 65.834 2 0.29377855389337404 0.00039635354736424893 0.00011089065285631857 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 57310 7399 LEAAIADAEQR True NCI_RA007_Epitope_Rep1 1185.59896550545 1185.5978699358602 32.776 2 0.29375626001492944 0.00039635354736424893 0.00011094731225364181 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 133093 8333 VVQELQQAISK True H1975_Epitope_Rep3 1241.6979512707296 1241.6968499358602 37.037 2 0.2937376222867276 0.00039635354736424893 0.00011099470185734926 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 3583 9012 AGNEDIITLR True H1975_Epitope_Rep1 1100.5825871653199 1100.5814899358602 39.569 2 0.29363543351321353 0.00039635354736424893 0.00011125489445370348 ['ENSG00000132646|ENST00000379143|PCNA'] 141792 12490 YVDDASWMRY True H1975_Epitope_Rep1 1304.54957278488 1304.54846993586 53.083 2 0.29362397327813455 0.00039635354736424893 0.00011128411248784808 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 141244 9470 YTDFDGTRVY True H1975_Epitope_Rep1 1235.54586730343 1235.5447699358601 41.344 2 0.29361128437807754 0.00039635354736424893 0.00011131647197818045 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 94960 4888 RTLDLTYRK True NCI_RA007_Epitope_Rep4 1164.66150619236 1164.65986490379 25.252 3 0.29353175488275457 0.00039635354736424893 0.00011151950426375879 ['ENST00000369183.8_1_10:120095785-120095896:-|nuORF'] 53695 5185 KSFDTSLIRK True NCI_RA007_Epitope_Rep5 1193.67682190333 1193.6751749037899 26.638 3 0.29346742364450384 0.00039635354736424893 0.00011168400770963033 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 6816 12839 AQEYEALLNIK True NCI_RA007_Epitope_Rep2 1290.6819668534197 1290.68086993586 54.56 2 0.29345832299670643 0.00039635354736424893 0.00011170729886056988 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 2391 5404 AEQEEEVQRAV True H1975_Epitope_Rep2 1286.61025846514 1286.60916993586 25.819 2 0.2933258630805178 0.00039635354736424893 0.00011204685224906788 ['ENST00000531121.5_1_11:65686926-65687405:+|nuORF'] 109689 12819 TEDDFQRELF True H1975_Epitope_Rep2 1298.5778957076998 1298.57678993586 54.417 2 0.2932869982722355 0.00039635354736424893 0.00011214667578333575 ['ENSG00000125686|ENST00000300651|MED1', 'MED1|p.S714L|1|0.32|ENSG00000125686|chr17:39410080-39410080|G/A|missense_variant'] 137205 19004 YAYDGKDYLAL True PC9_epitope_Rep2 1290.6132185872598 1290.6121299358601 78.464 2 0.2932784675675187 0.00039635354736424893 0.00011216859864664975 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 134225 18857 VYMDWYEKF True PC9_epitope_Rep6 1279.5583465634297 1279.55724993586 85.181 2 0.2932591230674306 0.00039635354736424893 0.00011221832752489004 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 66225 4773 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 23.449 2 0.29324483887303415 0.00039635354736424893 0.0001122550620415152 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 26473 11955 FIDVDDERWHY True H1975_Epitope_Rep2 1493.65754301073 1493.65644993586 51.064 2 0.2931629668623189 0.00039635354736424893 0.00011246584370609879 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 13890 7275 DQVANSAFVER True H1975_Epitope_Rep3 1234.59421447818 1234.5931099358602 32.958 2 0.29315723185859927 0.00039635354736424893 0.00011248062345938443 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 22641 9308 ETNLFETEETR True NCI_RA007_Epitope_Rep2 1367.6204887956699 1367.61938993586 40.813 2 0.29310914916149766 0.00039635354736424893 0.00011260461448904344 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 141661 11553 YTSYPMHDFY True H1975_Epitope_Rep3 1322.52777471114 1322.5266699358601 49.566 2 0.2931030470354316 0.00039635354736424893 0.00011262035984095514 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 90244 7755 REEEEKLLHLA True H1975_Epitope_Rep2 1365.7252286477299 1365.72358490379 34.783 3 0.29305637649958477 0.00039635354736424893 0.00011274085698256657 ['ENSG00000096401|ENST00000371477|CDC5L', 'CDC5L|p.L387Cfs*9|1|0.66|ENSG00000096401|chr6:44419515-44419515|T/-|frameshift_variant'] 95289 6999 RVQEAVESMVK True NCI_RA007_Epitope_Rep1 1274.66527124346 1274.6641699358602 31.223 2 0.29304525446630925 0.00039635354736424893 0.00011276959162931126 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 134749 19294 VYTSKSDVWSF True PC9_epitope_Rep5 1317.62411762413 1317.6230299358601 79.258 2 0.29295534394664735 0.00039635354736424893 0.00011300215176479741 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 57916 6475 LEGFHTQISK True NCI_RA007_Epitope_Rep1 1158.6033226099 1158.60166490379 29.206 3 0.2925830831846922 0.00039635354736424893 0.00011397014944627223 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1', 'ENST00000560420.1_1_14:24606925-24607473:+|nuORF'] 56786 10911 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 46.931 2 0.2925814082800947 0.00039635354736424893 0.00011397452343406563 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 100884 9222 SLESYAFNM[Oxidation]K True H1975_Epitope_Rep3 1204.5434251557197 1204.5423299358602 40.465 2 0.29252516735362505 0.00039635354736424893 0.00011412149331487448 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 109783 16774 TEDYLSLILNR True H1975_Epitope_Rep3 1335.7034305739899 1335.70232993586 70.067 2 0.29244291974657105 0.00039635354736424893 0.00011433676588434683 ['CON__P02769'] 49080 5677 KEIEEYIHKP True H1975_Epitope_Rep1 1284.6714021697198 1284.66976490379 26.903 3 0.29240763170034645 0.00039635354736424893 0.00011442925234884932 ['ENSG00000039123|ENST00000230640|MTREX'] 142746 12154 YYQNYFEKL True NCI_RA007_Epitope_Rep3 1266.5920892198599 1266.59098993586 54.928 2 0.2923258346711975 0.00039635354736424893 0.0001146439222212424 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 74006 14406 NDEELNKLLGK True PC9_epitope_Rep3 1271.6721304457099 1271.67049490379 60.511 3 0.2921824317221818 0.00039635354736424893 0.00011502124500322258 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 49381 6687 KESYSVYVYK True NCI_RA007_Epitope_Rep5 1264.6339540318397 1264.6328499358601 32.391 2 0.2921687579932994 0.00039635354736424893 0.00011505728824008274 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 93537 15548 RQLESMIRL True PC9_epitope_Rep5 1144.6386625727998 1144.63702490379 64.815 3 0.2921129727548099 0.00039635354736424893 0.00011520445237222441 ['ENSG00000076003|ENST00000264156|MCM6', 'MCM6|p.E629V|1|0.33|ENSG00000076003|chr2:135851433-135851433|T/A|missense_variant'] 39731 11919 HLVDEPQNLIK True PC9_epitope_Rep2 1304.7088503076 1304.7072149037901 51.17 3 0.29209073251206 0.00039635354736424893 0.00011526317570031234 ['CON__P02769'] 116333 6058 TTESQELSRY True H1975_Epitope_Rep2 1212.56224564356 1212.5611499358602 28.279 2 0.2920904177412263 0.00039635354736424893 0.00011526400703885759 ['ENSG00000151503|ENST00000534548|NCAPD3'] 140954 8133 YSEYPPFSHRY True H1975_Epitope_Rep1 1444.6411646706 1444.63951490379 36.222 3 0.2919812274531339 0.00039635354736424893 0.00011555275091144935 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 82069 10020 PM[Oxidation]FIVNTNVPR True H1975_Epitope_Rep1 1302.6754423847801 1302.6743499358602 43.478 2 0.291934019290539 0.00039635354736424893 0.00011567781265236859 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 70775 11763 LYADVGGKQF True PC9_epitope_Rep6 1096.55530978832 1096.5542099358602 56.408 2 0.29192846257193833 0.00039635354736424893 0.00011569254216814422 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 86586 5108 QLEEAEEEAQR True NCI_RA007_Epitope_Rep2 1330.60008770426 1330.5989899358601 24.492 2 0.29183688931936064 0.00039635354736424893 0.00011593555118722192 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 111101 4904 THEAQIQEMR True PC9_epitope_Rep5 1241.58226989549 1241.5806149037899 23.903 3 0.29180620068089147 0.00039635354736424893 0.0001160171042059778 ['ENSG00000100345|ENST00000216181|MYH9'] 54200 6437 KVVEGSFVYK True NCI_RA007_Epitope_Rep4 1154.6335601090198 1154.6324699358602 31.36 2 0.29179546067021017 0.00039635354736424893 0.00011604565862961824 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 10989 15093 DALNDEINFLR True H1975_Epitope_Rep1 1318.6517293543 1318.65062993586 63.308 2 0.29176020334419617 0.00039635354736424893 0.00011613944658922072 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF'] 54610 18415 KYLDEDTIYHL True PC9_epitope_Rep3 1408.68744615668 1408.68580490379 76.04 3 0.29175843268171037 0.00039635354736424893 0.0001161441587256149 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 55061 10036 KYTKIFNDF True NCI_RA007_Epitope_Rep4 1174.60225998074 1174.60116993586 45.446 2 0.29170716522489665 0.00039635354736424893 0.00011628067610487957 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 141660 11693 YTSYPMHDFY True H1975_Epitope_Rep2 1322.52777471114 1322.5266699358601 50.052 2 0.29168569026085417 0.00039635354736424893 0.00011633790834932419 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 106263 4674 STESLQANVQR True H1975_Epitope_Rep3 1231.6156781987497 1231.61458993586 23.102 2 0.2915991093024213 0.00039635354736424893 0.00011656893857392901 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 90400 2755 REIEDPEDRKP True H1975_Epitope_Rep2 1382.6790067312995 1382.67736490379 14.625 3 0.2915553734375002 0.00039635354736424893 0.00011668581661615047 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 4612 6853 ALAAAGYDVEK True NCI_RA007_Epitope_Rep5 1106.56078909158 1106.5596899358602 33.044 2 0.29149266077685715 0.00039635354736424893 0.00011685361217641178 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 62209 14421 LLESLDQLELR True H1975_Epitope_Rep1 1327.7347307022699 1327.73362993586 60.667 2 0.2913872455680687 0.00039635354736424893 0.00011713620797300173 ['ENSG00000112208|ENST00000370693|BAG2'] 63880 9131 LNNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1088.58998142532 1088.5888899358602 40.111 2 0.2912964722678623 0.00039635354736424893 0.00011738009986239521 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 140864 8962 YSDVGRYIDHY True H1975_Epitope_Rep3 1386.62042922602 1386.6193299358602 39.467 2 0.2912395526367524 0.00039635354736424893 0.00011753329205693712 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 59734 8191 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1269.55471811541 1269.55362993586 36.497 2 0.29122469245119215 0.00039635354736424893 0.00011757331934467384 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 53694 5675 KSFDTSLIRK True NCI_RA007_Epitope_Rep4 1193.67682190333 1193.6751749037899 28.434 3 0.29117467560365173 0.00039635354736424893 0.00011770814461424466 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 134264 14012 VYNENLVHM[Oxidation]I True PC9_epitope_Rep2 1246.60160873818 1246.6005099358601 59.173 2 0.2911701794720885 0.00039635354736424893 0.00011772027194981459 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 35621 12892 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 54.66 2 0.2911574645291933 0.00039635354736424893 0.00011775457450686624 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 84655 18302 QDGQFSVLFTK True PC9_epitope_Rep4 1268.6401020414398 1268.63900993586 78.467 2 0.29114969605182944 0.00039635354736424893 0.00011777553733984916 ['CON__P12763'] 35826 11673 GTLDYILQR True NCI_RA007_Epitope_Rep3 1077.5818588893299 1077.5807699358602 53.034 2 0.29112168992166054 0.00039635354736424893 0.00011785114143246229 ['ENSG00000140718|ENST00000471389|FTO'] 137349 7108 YDNEFGYSNR True H1975_Epitope_Rep3 1263.5156298043098 1263.51452993586 32.311 2 0.29109991539167285 0.00039635354736424893 0.00011790995653421498 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 54543 9354 KYINTDAKF True PC9_epitope_Rep1 1098.5709598524597 1098.5698699358602 40.838 2 0.2910233700899081 0.00039635354736424893 0.00011811694597973762 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 88256 14190 QSDPWQQELY True H1975_Epitope_Rep2 1292.5673310240002 1292.56622993586 59.733 2 0.2909468821168176 0.00039635354736424893 0.00011832414361192015 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 11495 6779 DFHVDEQTTVK True NCI_RA007_Epitope_Rep2 1317.62009487285 1317.61843490379 30.984 3 0.29087825686567137 0.00039635354736424893 0.00011851035151643971 ['CON__P34955'] 26474 11805 FIDVDDERWHY True H1975_Epitope_Rep3 1493.65754301073 1493.6558849037901 50.555 3 0.2908418110554398 0.00039635354736424893 0.00011860936284993104 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 119662 5795 VAVEEVDEEGK True NCI_RA007_Epitope_Rep2 1202.5666623176596 1202.5655699358601 27.159 2 0.29083381266073366 0.00039635354736424893 0.00011863110294382773 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 136716 11413 WYDNEFGYSNR True NCI_RA007_Epitope_Rep1 1449.5949427541698 1449.5938499358601 48.359 2 0.29082310801368244 0.00039635354736424893 0.00011866020502597527 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 20066 3627 EM[Oxidation]EAELEDERK True NCI_RA007_Epitope_Rep2 1393.60312485981 1393.60147490379 18.759 3 0.29079067414465726 0.00039635354736424893 0.00011874842466406045 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 113889 5548 TNQELQEINR True H1975_Epitope_Rep3 1243.61567819875 1243.61458993586 26.386 2 0.2907165732716051 0.00039635354736424893 0.00011895022428068924 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 137741 5709 YENEVALRQ True NCI_RA007_Epitope_Rep3 1120.5512870370399 1120.55018993586 29.431 2 0.2907116779032384 0.00039635354736424893 0.00011896356796242539 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 23572 10481 EVYELLDSPGK True H1975_Epitope_Rep1 1248.6237832709596 1248.62268993586 45.27 2 0.2907046181576949 0.00039635354736424893 0.00011898281389114016 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 2398 7816 AEQEPQPERLV True H1975_Epitope_Rep2 1294.6517293542997 1294.65062993586 35.011 2 0.29067353952046476 0.00039635354736424893 0.00011906757598951676 ['ENSG00000124217|ENST00000244051|MOCS3'] 136715 10727 WYDNEFGYSNR True H1975_Epitope_Rep3 1449.5949427541698 1449.5938499358601 46.339 2 0.2906476186471993 0.00039635354736424893 0.00011913831731139623 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 133087 10161 VVQDGITLITK True NCI_RA007_Epitope_Rep4 1185.69688864157 1185.6957899358601 45.942 2 0.2906281967832501 0.00039635354736424893 0.00011919134958151383 ['ENSG00000079246|ENST00000392132|XRCC5'] 116292 13698 TTDLSFLDKY True H1975_Epitope_Rep3 1201.58666948625 1201.5855699358601 57.983 2 0.2906263482396513 0.00039635354736424893 0.00011919639834370701 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'UBA6|p.Y611Tfs*17|1|0.45|ENSG00000033178|chr4:67635464-67635464|A/-|frameshift_variant', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 137684 5635 YEKEEDWRNAA True H1975_Epitope_Rep2 1409.62115750201 1409.61952490379 26.674 3 0.29056807498212717 0.00039635354736424893 0.00011935566464898288 ['COPS4|p.P331Lfs*8|1|0.35|ENSG00000138663|chr4:83066541-83066541|C/-|frameshift_variant', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENSG00000138663|ENST00000264389|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 39722 8631 HLVDEPQNLIK True NCI_RA007_Epitope_Rep1 1304.7088503076 1304.7072149037901 37.574 3 0.2905459600000534 0.00039635354736424893 0.00011941616270844288 ['CON__P02769'] 89231 10100 QVVESAYEVIK True NCI_RA007_Epitope_Rep2 1263.6710678165498 1263.66996993586 43.875 2 0.29048849103638663 0.00039635354736424893 0.0001195735191451141 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 56723 12033 LDLEIATYR True NCI_RA007_Epitope_Rep2 1092.58152453616 1092.5804299358601 51.398 2 0.2904788536308727 0.00039635354736424893 0.00011959992774571476 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 108567 19295 SYNNFFRM[Oxidation]F True PC9_epitope_Rep4 1240.5335291783597 1240.5324299358601 82.324 2 0.2903789057606722 0.00039635354736424893 0.00011987415116794909 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 133987 6616 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5287299358602 33.084 2 0.2903749801727764 0.00039635354736424893 0.0001198849344962192 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 140914 6124 YSEGYPGQRY True H1975_Epitope_Rep2 1218.53055159246 1218.5294499358602 28.536 2 0.2903386189099127 0.00039635354736424893 0.00011998486261012001 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 5837 13404 APFDLFENR True H1975_Epitope_Rep1 1107.53490869691 1107.53380993586 56.671 2 0.2902932841512051 0.00039635354736424893 0.00012010956846236072 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 134000 10082 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5287299358602 43.651 2 0.2902110361929232 0.00039635354736424893 0.0001203361455383207 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 73382 4963 M[Oxidation]TESYEQEKY True H1975_Epitope_Rep3 1322.5336483176598 1322.53254993586 24.218 2 0.29020301710135354 0.00039635354736424893 0.00012035825944218674 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 118567 18127 TYQRWQFTL True PC9_epitope_Rep6 1241.61930702721 1241.61820993586 82.361 2 0.29016971241252454 0.00039635354736424893 0.00012045014587642833 ['ENSG00000174231|ENST00000304992|PRPF8'] 45951 10145 ISEQFTAM[Oxidation]FR True H1975_Epitope_Rep1 1244.58595867404 1244.58486993586 43.961 2 0.2901585442449021 0.00039635354736424893 0.00012048097416222807 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 44325 14604 ILDLISESPIK True NCI_RA007_Epitope_Rep2 1226.7122043525399 1226.7111099358601 61.471 2 0.29005425457849254 0.00039635354736424893 0.00012076923373244501 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 33092 5313 GIPHLVTHDAR True NCI_RA007_Epitope_Rep4 1214.65200413782 1214.65036490379 26.996 3 0.2900505190884775 0.00039635354736424893 0.00012077957152529541 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENSG00000280969|ENST00000629237|RPS4Y2'] 115841 7470 TSDVDLDKY True H1975_Epitope_Rep3 1054.4818700645399 1054.48076993586 33.712 2 0.2898449993882732 0.00039635354736424893 0.0001213497043678707 ['ENST00000564709.5_1_16:1827100-1828401:-|nuORF', 'ENSG00000162032|ENST00000566339|SPSB3', 'ENST00000569380.5_1_16:1827941-1828049:-|nuORF'] 8186 9038 ATEVDSRWQEY True H1975_Epitope_Rep3 1382.6102584651399 1382.60916993586 39.752 2 0.28981330839665603 0.00039635354736424893 0.00012143785779397799 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'MACF1|p.S820Afs*39|1|0.14|ENSG00000127603|chr1:39297705-39297705|C/-|frameshift_variant', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 95032 2969 RTSEIYVHR True NCI_RA007_Epitope_Rep2 1159.6098049726697 1159.60816490379 16.068 3 0.2897519451503268 0.00039635354736424893 0.00012160873143499422 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 22640 9652 ETNLFETEETR True NCI_RA007_Epitope_Rep1 1367.6204887956699 1367.61938993586 41.542 2 0.28971074150339937 0.00039635354736424893 0.00012172360314986164 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 45916 5648 ISEEDELDTK True H1975_Epitope_Rep3 1177.53502783621 1177.5339299358602 26.755 2 0.2897026950344435 0.00039635354736424893 0.00012174604858389889 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 134220 20711 VYMDWYEKF True PC9_epitope_Rep2 1279.5583465634297 1279.55724993586 85.101 2 0.28968924618203973 0.00039635354736424893 0.00012178357308529269 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 29195 7548 FTSDLQDKNEY True H1975_Epitope_Rep2 1358.5990250751001 1358.59792993586 33.984 2 0.2896771822685009 0.00039635354736424893 0.00012181724322798784 ['ENSG00000075188|ENST00000552283|NUP37', 'ENST00000551200.5_1_12:102471044-102512308:-|nuORF'] 10153 9350 AYVHM[Oxidation]VTHF True PC9_epitope_Rep1 1119.5171508382302 1119.51604993586 40.822 2 0.28966653837867945 0.00039635354736424893 0.0001218469578481054 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 71511 9194 LYYYIQQDTK True H1975_Epitope_Rep1 1333.6554177524097 1333.65432993586 40.272 2 0.28965135309435486 0.00039635354736424893 0.00012188936326675844 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 16076 8397 EEAENTLQSFR True H1975_Epitope_Rep3 1322.61025846514 1322.60916993586 37.282 2 0.28959964259788923 0.00039635354736424893 0.0001220338773791666 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 14305 6694 DSYDSYATHNE True NCI_RA007_Epitope_Rep1 1300.48438924568 1300.48328993586 30.048 2 0.2894817907483947 0.00039635354736424893 0.00012236387619783635 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF'] 43066 10599 IEVIEIM[Oxidation]TDR True NCI_RA007_Epitope_Rep1 1233.62748913285 1233.62638993586 45.214 2 0.2894738862242906 0.00039635354736424893 0.00012238604171025305 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 140752 12998 YSDDNPYYNYY True H1975_Epitope_Rep2 1475.55174052951 1475.55064993586 55.114 2 0.28947120132818943 0.00039635354736424893 0.00012239357148978924 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 32339 14696 GFGFVTFDDHD True H1975_Epitope_Rep3 1255.51456717515 1255.51346993586 61.9 2 0.2894670956167208 0.00039635354736424893 0.0001224050868364303 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77584 10862 NTDPWAGYRY True H1975_Epitope_Rep3 1241.5465360097699 1241.54542993586 46.863 2 0.2893943593138851 0.00039635354736424893 0.0001226092712061475 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 42637 3130 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 16.575 2 0.28938887362516436 0.00039635354736424893 0.00012262468437319554 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 139109 10721 YLDNVIGHSY True H1975_Epitope_Rep1 1179.55603806431 1179.5549499358601 46.2 2 0.28938873152629147 0.00039635354736424893 0.00012262508365487284 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 16960 7323 EFTESQLQEGK True NCI_RA007_Epitope_Rep1 1294.6041104555395 1294.6030099358602 32.477 2 0.2893775550846744 0.00039635354736424893 0.00012265649226099335 ['ENSG00000149591|ENST00000392951|TAGLN'] 137536 6605 YEEIDNAPEER True NCI_RA007_Epitope_Rep1 1363.5891886673896 1363.5880899358601 29.706 2 0.28937425347816 0.00039635354736424893 0.00012266577214428088 ['ENSG00000178952|ENST00000313511|TUFM'] 77909 6574 NVIGLQM[Oxidation]GTNR True H1975_Epitope_Rep3 1217.61865578465 1217.61754993586 30.242 2 0.2893534872671979 0.00039635354736424893 0.00012272415620693034 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 54089 11560 KVLEDQQNIRL True PC9_epitope_Rep5 1354.75686312918 1354.75522490379 49.461 3 0.28933176052509785 0.00039635354736424893 0.00012278527056474155 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32'] 40263 20193 HQLENLSNFI True PC9_epitope_Rep1 1213.6091362663299 1213.60802993586 82.501 2 0.2892616904219742 0.00039635354736424893 0.00012298257577000925 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2', 'ENST00000443067.1_1_1:166765603-166766044:+|nuORF'] 86588 5235 QLEEAEEEAQR True PC9_epitope_Rep4 1330.60008770426 1330.5989899358601 26.835 2 0.2892426754928086 0.00039635354736424893 0.0001230361732107506 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 73381 5050 M[Oxidation]TESYEQEKY True H1975_Epitope_Rep2 1322.5336483176598 1322.53254993586 24.508 2 0.28918787490982295 0.00039635354736424893 0.00012319077058339963 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 59732 8465 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep1 1269.55471811541 1269.55362993586 36.926 2 0.28914357575805155 0.00039635354736424893 0.0001233158845515861 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 40958 13131 HTDDPLTWDY True H1975_Epitope_Rep3 1261.52513185885 1261.5240299358602 55.756 2 0.28911069587121485 0.00039635354736424893 0.000123408829332505 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 140885 10063 YSEDLSDMHY True H1975_Epitope_Rep1 1258.48121844154 1258.48012993586 43.648 2 0.28909956692642796 0.00039635354736424893 0.00012344030448301475 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 2363 5739 AEQAERYDDMA True H1975_Epitope_Rep2 1297.52448023585 1297.5233899358602 27.073 2 0.2890699255398831 0.00039635354736424893 0.0001235241761677436 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 54676 19410 KYLSVQGQLF True PC9_epitope_Rep3 1181.64445914589 1181.6433699358602 79.886 2 0.2890316070275242 0.00039635354736424893 0.00012363268470424985 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 4870 5585 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep1 1219.5754535599897 1219.57434993586 25.792 2 0.28898145548567206 0.00039635354736424893 0.00012377484558501184 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 14197 9515 DSDYHDENMYY True H1975_Epitope_Rep3 1450.49832505766 1450.49722993586 41.605 2 0.2889772704429269 0.00039635354736424893 0.00012378671600983521 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 55247 12737 LADIYRELY True H1975_Epitope_Rep3 1154.5971746003 1154.5960699358602 54.204 2 0.2889230126555425 0.00039635354736424893 0.00012394071557346123 ['TAF6L|p.R593Pfs*8|1|0.26|ENSG00000162227|chr11:62787205-62787205|G/-|frameshift_variant', 'ENSG00000162227|ENST00000294168|TAF6L'] 46264 12939 ISPDQLADLYK True H1975_Epitope_Rep3 1261.6554177524097 1261.65432993586 55.0 2 0.2889054290912092 0.00039635354736424893 0.00012399066402609985 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 73296 12016 MTDKFAQFDEY True H1975_Epitope_Rep2 1393.5860178632497 1393.5849299358601 51.299 2 0.2888967383433177 0.00039635354736424893 0.00012401535868933992 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 71005 19046 LYIGWDKHYGF True PC9_epitope_Rep4 1397.67682190333 1397.6751749037899 81.35 3 0.28885706924730953 0.00039635354736424893 0.00012412814050592142 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 88630 5018 QTEERVQPEY True H1975_Epitope_Rep2 1277.58879474457 1277.58768993586 24.385 2 0.2888525983408929 0.00039635354736424893 0.00012414085801758966 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 28861 7443 FTDEEGYGRY True H1975_Epitope_Rep2 1235.50948179471 1235.5083899358601 33.574 2 0.28875884302811183 0.00039635354736424893 0.00012440784596788392 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 26879 11717 FLDGIYVSEK True H1975_Epitope_Rep1 1169.59684024713 1169.59574993586 50.061 2 0.28875761274322115 0.00039635354736424893 0.0001244113532796334 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 109769 10228 TEDQYSFIHEA True H1975_Epitope_Rep2 1338.5728103272597 1338.57170993586 44.347 2 0.2886795412161274 0.00039635354736424893 0.00012463412307366604 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 95123 7461 RVFAAESIIKR True NCI_RA007_Epitope_Rep4 1288.7615545868 1288.7599049037901 35.344 3 0.2886554458268124 0.00039635354736424893 0.00012470295759159911 ['ENST00000469420.1_1_22:39267340-39268216:-|nuORF', 'ENSG00000183741|ENST00000407418|CBX6'] 137965 15368 YFINRSWEW True NCI_RA007_Epitope_Rep5 1299.6036569630699 1299.60254993586 65.819 2 0.28861421911219803 0.00039635354736424893 0.00012482082028034128 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 93485 6883 RQIPYTMMK True NCI_RA007_Epitope_Rep4 1166.5940208795 1166.5929299358602 33.092 2 0.2884331907308634 0.00039635354736424893 0.00012533968164077166 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'SLC25A3|p.A284Lfs*8|1|0.17|ENSG00000075415|chr12:98601203-98601203|G/-|frameshift_variant'] 130819 6780 VTAQVVGTERY True H1975_Epitope_Rep2 1221.6353510141698 1221.63424993586 30.994 2 0.2884160186335541 0.00039635354736424893 0.00012538901204367595 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF'] 64839 9265 LQDGEFSM[Oxidation]DLR True NCI_RA007_Epitope_Rep2 1325.59216625329 1325.59106993586 40.649 2 0.28837412957883873 0.00039635354736424893 0.00012550942854381382 ['ENSG00000108518|ENST00000225655|PFN1'] 38904 18743 HHFEWIQKL True PC9_epitope_Rep1 1236.64037682496 1236.63874490379 76.884 3 0.2883645143404946 0.00039635354736424893 0.00012553708534534207 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 125166 10841 VIHDNFGIVEG True NCI_RA007_Epitope_Rep2 1198.59823722946 1198.5971499358602 46.773 2 0.28834535522305477 0.00039635354736424893 0.00012559221187939513 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 18370 9117 EITALAPSTMK True NCI_RA007_Epitope_Rep2 1160.61111041228 1160.61000993586 40.069 2 0.28829311519860934 0.00039635354736424893 0.00012574264522960496 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 18836 14906 ELDPLTGEWHY True H1975_Epitope_Rep3 1358.61428121642 1358.6131899358602 62.723 2 0.28827253867463537 0.00039635354736424893 0.0001258019480499616 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 22982 5696 EVEVEVESM[Oxidation]DK True H1975_Epitope_Rep1 1308.5755131296398 1308.57440993586 26.976 2 0.2882447078234379 0.00039635354736424893 0.00012588220282547604 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 7496 6984 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64466490379 31.787 3 0.288235243160391 0.00039635354736424893 0.00012590950739073162 ['ENSG00000163584|ENST00000295830|RPL22L1'] 4869 5495 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep1 1219.5754535599897 1219.57434993586 25.445 2 0.28822507021072796 0.00039635354736424893 0.00012593886189794077 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 128842 20606 VQDELHSVLGL True PC9_epitope_Rep1 1208.64010204144 1208.63900993586 84.078 2 0.288162909954843 0.00039635354736424893 0.00012611837697341485 ['ENSG00000204560|ENST00000376442|DHX16'] 3213 5886 AGELTEDEVER True H1975_Epitope_Rep3 1246.5677249468197 1246.5666299358602 27.65 2 0.2881493235572338 0.00039635354736424893 0.0001261576477612648 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 29716 7086 FVM[Oxidation]EVEVDGQK True H1975_Epitope_Rep1 1295.60675368827 1295.6056499358601 32.283 2 0.2881378658365854 0.00039635354736424893 0.00012619077522869245 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 142440 19942 YYFEGIKQTF True PC9_epitope_Rep3 1294.6233893481397 1294.6222899358602 81.951 2 0.2881275479797765 0.00039635354736424893 0.00012622061448113744 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 46647 14028 ITDLPDHLLSY True H1975_Epitope_Rep3 1285.6554177524101 1285.65432993586 59.28 2 0.28811890716757127 0.00039635354736424893 0.0001262456091517215 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 38905 18979 HHFEWIQKL True PC9_epitope_Rep3 1236.64037682496 1236.63874490379 78.225 3 0.2880974727461185 0.00039635354736424893 0.00012630763238276742 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 37846 20389 GYLPNQLFRTF True PC9_epitope_Rep4 1354.70337100434 1354.7022699358602 86.571 2 0.28797973165371776 0.00039635354736424893 0.0001266488754734171 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 73367 15194 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.54634993586 63.6 2 0.28797806104493684 0.00039635354736424893 0.00012665372394744597 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 61897 13588 LLDEAQRLLY True H1975_Epitope_Rep1 1232.67648755016 1232.67538993586 57.395 2 0.2879574146982043 0.00039635354736424893 0.0001267136595212455 ['ENSG00000083817|ENST00000196489|ZNF416', 'ZIK1|p.K218Rfs*65|1|0.71|ENSG00000171649|chr19:57590460-57590460|G/-|frameshift_variant', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 78552 15329 NYQGHFHLF True PC9_epitope_Rep2 1161.5355774032498 1161.5344899358602 64.243 2 0.2879177693080017 0.00039635354736424893 0.00012682882820326278 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 136845 11533 YADNQVMHFY True H1975_Epitope_Rep2 1286.5390081011801 1286.5379099358602 49.421 2 0.28787890820979484 0.00039635354736424893 0.0001269418202077339 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 53966 6330 KTYGEIFEK True NCI_RA007_Epitope_Rep5 1113.57062549929 1113.5695299358601 31.025 2 0.2878544792770797 0.00039635354736424893 0.00012701290100628816 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 108568 18162 SYNNFFRM[Oxidation]F True PC9_epitope_Rep6 1240.5335291783597 1240.5324299358601 82.502 2 0.2877135343799104 0.00039635354736424893 0.00012742378655973682 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 107275 20835 SVLDDNKLLTL True PC9_epitope_Rep3 1229.68671788069 1229.68562993586 85.413 2 0.2876519550093894 0.00039635354736424893 0.00012760372134834735 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 2386 4357 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55606993586 21.877 2 0.28761214900619425 0.00039635354736424893 0.000127720169694881 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 142434 19996 YYFEGIKQTF True PC9_epitope_Rep1 1294.6233893481397 1294.6222899358602 81.742 2 0.2875073121720389 0.00039635354736424893 0.00012802736815710066 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 53194 6847 KQEELEAALQR True NCI_RA007_Epitope_Rep2 1313.6939285194496 1313.6922749037901 31.249 3 0.28748162726190685 0.00039635354736424893 0.00012810274415417323 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 114447 16327 TPVLFDIYEIK True H1975_Epitope_Rep3 1336.72785441668 1336.7267499358602 68.276 2 0.2874814730928553 0.00039635354736424893 0.00012810319671909508 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11', 'ANXA11|p.S301Dfs*8|1|0.09|ENSG00000122359|chr10:80164102-80164103|-/GCGAGGATCT|frameshift_variant'] 70320 7649 LVSESSDVLPK True NCI_RA007_Epitope_Rep5 1172.6288686514001 1172.6277699358602 36.124 2 0.28741693220740333 0.00039635354736424893 0.00012829279780459603 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 28871 11206 FTDEEVDELYR True H1975_Epitope_Rep3 1414.6252398229399 1414.62414993586 48.202 2 0.28739192653325846 0.00039635354736424893 0.00012836633217255016 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 66874 12172 LSNIFVIGK True NCI_RA007_Epitope_Rep5 989.5909670210499 989.58986993586 53.474 2 0.28738497761519455 0.00039635354736424893 0.00012838677439508094 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 9843 14211 AYLESFYKF True NCI_RA007_Epitope_Rep3 1166.5648118428599 1166.56370993586 63.205 2 0.28735964466689046 0.00039635354736424893 0.00012846132607310085 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 133935 6879 VYIKHPVSL True NCI_RA007_Epitope_Rep5 1054.61751612206 1054.61640993586 33.14 2 0.2872585234552094 0.00039635354736424893 0.0001287593449472705 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 30193 20747 FYQRFPLSF True PC9_epitope_Rep2 1203.6076797143498 1203.60658993586 85.243 2 0.28724656774512997 0.00039635354736424893 0.00012879462586677515 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 55416 9850 LAEYDLDKY True H1975_Epitope_Rep1 1128.5339056373998 1128.53280993586 42.821 2 0.28723534753671676 0.00039635354736424893 0.00012882774514457357 ['ENSG00000136045|ENST00000412830|PWP1', 'nc|ENSG00000136045|Q13610-2|PWP1'] 142702 9314 YYQDTPKQI True PC9_epitope_Rep3 1154.5607890915799 1154.5596899358602 40.766 2 0.2871448901712051 0.00039635354736424893 0.00012909506442989628 ['ENSG00000048162|ENST00000614830|NOP16'] 111593 8422 TIDDLEDKLK True H1975_Epitope_Rep1 1188.62378327096 1188.6221249037899 37.322 3 0.2871215888195873 0.00039635354736424893 0.00012916401437209978 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 139110 10790 YLDNVIGHSY True H1975_Epitope_Rep2 1179.55603806431 1179.5549499358601 46.531 2 0.2870991342586705 0.00039635354736424893 0.00012923049348585055 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 53989 6239 KVEAFQTTISK True NCI_RA007_Epitope_Rep1 1250.6870522338602 1250.6854049037902 28.302 3 0.2870948440393041 0.00039635354736424893 0.00012924319903193026 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000559359.1_1_14:24613399-24613677:-|nuORF', 'ENST00000453033.1_1_13:49345602-49345743:+|nuORF'] 10990 15076 DALNDEINFLR True H1975_Epitope_Rep3 1318.6517293543 1318.65062993586 63.385 2 0.28708496274932316 0.00039635354736424893 0.00012927246736948062 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF'] 68442 5130 LTEVNKTGTQY True H1975_Epitope_Rep3 1252.62993128056 1252.62882993586 24.84 2 0.2869712821760551 0.00039635354736424893 0.00012960966624609563 ['ENSG00000124570|ENST00000380539|SERPINB6'] 74926 14204 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69646993586 66.522 2 0.28695047237630855 0.00039635354736424893 0.00012967148744205383 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 137206 19362 YAYDGKDYLAL True PC9_epitope_Rep3 1290.6132185872598 1290.6121299358601 79.699 2 0.28690637653304946 0.00039635354736424893 0.0001298025837304369 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 126117 7005 VLETAEDIQER True H1975_Epitope_Rep3 1301.6463096206896 1301.64520993586 31.908 2 0.28689582770737265 0.00039635354736424893 0.0001298339648888328 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 53962 6144 KTYGEIFEK True NCI_RA007_Epitope_Rep3 1113.57062549929 1113.5695299358601 31.16 2 0.28686902727593916 0.00039635354736424893 0.0001299137262662224 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 102934 9964 SPDQLADLYK True H1975_Epitope_Rep1 1148.5713537752797 1148.5702499358601 43.263 2 0.2868448407858299 0.00039635354736424893 0.00012998575032998835 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 137554 11614 YEELQSLAGK True PC9_epitope_Rep2 1136.5713537752797 1136.5702499358601 50.0 2 0.28681073768947873 0.00039635354736424893 0.00013008737259528075 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 95650 8749 RYFDPANGKF True NCI_RA007_Epitope_Rep4 1213.5880068989297 1213.5869099358601 40.45 2 0.28675708189364396 0.00039635354736424893 0.00013024742004410884 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 80093 18239 PFLQASPHF True PC9_epitope_Rep3 1042.5236157372199 1042.5225099358602 75.367 2 0.28672580354879135 0.00039635354736424893 0.00013034080971244 ['ENSG00000147689|ENST00000690554|FAM83A'] 15679 7780 EATTEFSVDAR True NCI_RA007_Epitope_Rep2 1224.56224564356 1224.5611499358602 34.891 2 0.2867183534419927 0.00039635354736424893 0.0001303630638325324 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 43064 10173 IEVIEIM[Oxidation]TDR True H1975_Epitope_Rep1 1233.62748913285 1233.62638993586 44.07 2 0.28669594734154713 0.00039635354736424893 0.0001304300157309753 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 139176 8503 YLEEIATQM[Oxidation]R True NCI_RA007_Epitope_Rep1 1268.60708804144 1268.6059899358602 37.074 2 0.2865766610471158 0.00039635354736424893 0.0001307870360451178 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 25984 10031 FGEENIEVYHS True H1975_Epitope_Rep1 1322.5778957077 1322.57678993586 43.523 2 0.2865397891726728 0.00039635354736424893 0.00013089759022004357 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 25980 6932 FGDPVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep2 1237.56488887629 1237.56378993586 31.584 2 0.2864937905973545 0.00039635354736424893 0.00013103564041324936 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 45890 11400 ISDSVLVDIK True NCI_RA007_Epitope_Rep1 1087.6124903112698 1087.6113899358602 48.312 2 0.286440683910027 0.00039635354736424893 0.00013119520459414105 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'CCT5|p.K150N|1|0.15|ENSG00000150753|chr5:10256073-10256073|G/C|missense_variant'] 116229 15521 TTDDWKDFLY True H1975_Epitope_Rep1 1302.57683307854 1302.5757299358602 64.977 2 0.28635366350600394 0.00039635354736424893 0.00013145708631093485 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 4751 11973 ALDLEIATYR True H1975_Epitope_Rep3 1163.6186383208699 1163.61754993586 51.213 2 0.28628440156821516 0.00039635354736424893 0.00013166589905268738 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 13754 17265 DQELYFFHEL True H1975_Epitope_Rep1 1339.6084675599898 1339.60736993586 71.871 2 0.28627172336868234 0.00039635354736424893 0.00013170415755514472 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 53286 14618 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6745149037902 61.497 3 0.28617858746953423 0.00039635354736424893 0.00013198555136731486 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 49086 5898 KEIEEYIHKP True H1975_Epitope_Rep3 1284.6714021697198 1284.66976490379 27.698 3 0.2861783378531131 0.00039635354736424893 0.00013198630634753266 ['ENSG00000039123|ENST00000230640|MTREX'] 16450 5078 EELEEEQRTEE True NCI_RA007_Epitope_Rep1 1419.6001472739097 1419.5990499358602 23.836 2 0.28617070369853803 0.00039635354736424893 0.00013200939840513458 ['ENSG00000182534|ENST00000449428|MXRA7'] 126090 12150 VLELVSITANK True NCI_RA007_Epitope_Rep1 1185.69688864157 1185.6957899358601 51.235 2 0.2860948570979359 0.00039635354736424893 0.00013223904161219877 ['ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 141387 6776 YTEFTPTEKDE True H1975_Epitope_Rep1 1358.5877916850598 1358.58668993586 31.106 2 0.2860041616820109 0.00039635354736424893 0.00013251416800032833 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 126914 8493 VLQSFTVDSSK True NCI_RA007_Epitope_Rep2 1209.62411762413 1209.6230299358601 37.68 2 0.2860037882934699 0.00039635354736424893 0.0001325153018653409 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 4752 12511 ALDLEIATYR True NCI_RA007_Epitope_Rep1 1163.6186383208699 1163.61754993586 52.644 2 0.2859421286951087 0.00039635354736424893 0.0001327026761687669 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 63883 9586 LNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 1088.58998142532 1088.5888899358602 41.903 2 0.28593744774241564 0.00039635354736424893 0.00013271691170868485 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 22372 15759 ETEEDKFLLLY True H1975_Epitope_Rep1 1398.6918628307799 1398.69076993586 65.922 2 0.28593112072919935 0.00039635354736424893 0.00013273615561592734 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 15337 5064 EAGEQGDIEPR True PC9_epitope_Rep1 1199.5418445521498 1199.54074993586 24.334 2 0.2857865360989263 0.00039635354736424893 0.0001331766784346279 ['ENSG00000145907|ENST00000356245|G3BP1'] 70053 17614 LVNELTEFAK True PC9_epitope_Rep1 1162.6233893481399 1162.6222899358602 72.544 2 0.2857314556985103 0.00039635354736424893 0.00013334488291984534 ['CON__P02769'] 53297 14020 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6750499358602 61.839 2 0.28571206810089766 0.00039635354736424893 0.00013340413932794157 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 106209 7037 STDVSQPPHVY True H1975_Epitope_Rep2 1228.5724164044402 1228.5713099358602 31.992 2 0.28564558134687407 0.00039635354736424893 0.00013360755020313836 ['nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENSG00000086200|ENST00000325324|IPO11', 'ENST00000502862.1_1_5:61811283-61822085:+|nuORF'] 72684 3565 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 18.686 2 0.2856425003955348 0.00039635354736424893 0.00013361698364763595 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 137685 5529 YEKEEDWRNAA True H1975_Epitope_Rep2 1409.62115750201 1409.62006993586 26.275 2 0.285641463428422 0.00039635354736424893 0.00013362015884664738 ['COPS4|p.P331Lfs*8|1|0.35|ENSG00000138663|chr4:83066541-83066541|C/-|frameshift_variant', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENSG00000138663|ENST00000264389|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 5812 14205 APELLFFAK True NCI_RA007_Epitope_Rep3 1034.5800679841798 1034.5789699358602 63.18 2 0.28562567093713404 0.00039635354736424893 0.00013366852487552006 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 14000 4954 DREEALHQFR True NCI_RA007_Epitope_Rep4 1299.6319969692297 1299.63034490379 25.521 3 0.2855962767635058 0.00039635354736424893 0.0001337585940301532 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 65853 15319 LSDLLDWKY True H1975_Epitope_Rep3 1151.58627556343 1151.5851699358602 64.334 2 0.28559106594802025 0.00039635354736424893 0.00013377456726437956 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 125937 7172 VLDEADEM[Oxidation]LSR True H1975_Epitope_Rep3 1292.59183190012 1292.59072993586 32.561 2 0.28550913305240844 0.00039635354736424893 0.00013402597551752463 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 25978 6478 FGDPVVQSDM[Oxidation]K True H1975_Epitope_Rep3 1237.56488887629 1237.56378993586 29.886 2 0.2855046592167604 0.00039635354736424893 0.00013403971693446893 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 58497 6735 LEQEIATYR True H1975_Epitope_Rep1 1121.57168812845 1121.5705899358602 30.947 2 0.28549862368522305 0.00039635354736424893 0.00013405825734536214 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 14941 10339 DYETATLSDIK True H1975_Epitope_Rep1 1254.5979624459399 1254.59686993586 44.716 2 0.28538490547477485 0.00039635354736424893 0.00013440806586120836 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 134010 10176 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 44.094 3 0.28534148409204757 0.00039635354736424893 0.00013454187522514096 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 48936 6805 KEEELQAALAR True NCI_RA007_Epitope_Rep1 1256.67246479888 1256.6708249037902 30.478 3 0.28533242366908423 0.00039635354736424893 0.0001345698130562352 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 108560 21745 SYNNFFRMF True PC9_epitope_Rep1 1224.53861417836 1224.53750993586 88.475 2 0.2853292055698512 0.00039635354736424893 0.0001345797374685107 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 98044 9205 SEQLDLPVRQA True H1975_Epitope_Rep3 1254.65681473474 1254.6557099358602 40.4 2 0.2852814175580468 0.00039635354736424893 0.00013472719887628966 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 53285 15519 KQLDDLKVEL True PC9_epitope_Rep1 1199.6761531969898 1199.6750499358602 64.517 2 0.2852235473479054 0.00039635354736424893 0.00013490598783486398 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 43580 8615 IGSLIDVNQSK True H1975_Epitope_Rep3 1172.6401020414398 1172.63900993586 38.13 2 0.285155138239119 0.00039635354736424893 0.00013511764281589402 ['ENST00000544850.5_1_12:10758876-10761762:-|nuORF', 'nc|ENSG00000162385|P61326-2|MAGOH', 'ENSG00000162385|ENST00000371470|MAGOH', 'ENSG00000111196|ENST00000320756|MAGOHB'] 11527 11346 DFM[Oxidation]IQGGDFTR True H1975_Epitope_Rep3 1301.5710368858895 1301.56992993586 48.753 2 0.2850549324270309 0.00039635354736424893 0.00013542827559700948 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 88660 4871 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 23.823 2 0.2850376866032234 0.00039635354736424893 0.00013548180879356864 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 11183 10269 DDSNLYINVK True NCI_RA007_Epitope_Rep1 1179.57716743171 1179.57606993586 43.954 2 0.28503721790774766 0.00039635354736424893 0.00013548326397858776 ['ENSG00000100714|ENST00000652337|MTHFD1', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 141430 6569 YTETEPYHNY True H1975_Epitope_Rep3 1315.5356965425499 1315.5345899358601 30.225 2 0.28503476818915946 0.00039635354736424893 0.00013549087001125414 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 3218 8268 AGELTEDEVER True PC9_epitope_Rep1 1246.5677249468197 1246.5666299358602 36.636 2 0.284898931368965 0.00039635354736424893 0.0001359132938224902 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 116231 15727 TTDDWKDFLY True H1975_Epitope_Rep2 1302.57683307854 1302.5757299358602 65.667 2 0.2848146038193005 0.00039635354736424893 0.00013617619756174233 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 48478 4921 KAFNQGKIFK True NCI_RA007_Epitope_Rep4 1179.67642798051 1179.67477490379 25.389 3 0.28478125139427873 0.00039635354736424893 0.00013628031913859044 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 137377 10285 YDSYLGDDYVR True H1975_Epitope_Rep1 1364.5884603913998 1364.5873699358601 44.506 2 0.2847776634088726 0.00039635354736424893 0.00013629152506991043 ['CON__Q29443', 'CON__Q0IIK2'] 68210 13426 LTDYDIRFY True H1975_Epitope_Rep1 1204.57643915572 1204.57534993586 56.756 2 0.2847261733146999 0.00039635354736424893 0.00013645243961887157 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 57576 6844 LEDTLAETEAR True H1975_Epitope_Rep1 1246.60411045554 1246.6030099358602 31.369 2 0.2846914408157746 0.00039635354736424893 0.0001365610914548867 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 125419 4807 VITEEEKNFK True NCI_RA007_Epitope_Rep4 1235.63976768827 1235.63812490379 24.925 3 0.2846508490314262 0.00039635354736424893 0.00013668818231938245 ['ENSG00000167526|ENST00000311528|RPL13', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000570149.1_1_16:89628679-89629447:+|nuORF'] 44324 14480 ILDLISESPIK True NCI_RA007_Epitope_Rep1 1226.7122043525399 1226.7111099358601 60.369 2 0.2846462803464116 0.00039635354736424893 0.00013670249405524162 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 16084 11831 EEAENTLQSFR True PC9_epitope_Rep2 1322.61025846514 1322.60916993586 50.839 2 0.284644381871536 0.00039635354736424893 0.0001367084416060197 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 23997 6290 EYMKHTRLF True NCI_RA007_Epitope_Rep5 1223.6121134717898 1223.61046490379 30.874 3 0.2845160872106129 0.00039635354736424893 0.0001371109643890477 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 73192 13246 MRYNEKELQAL True PC9_epitope_Rep5 1393.70238502817 1393.70074490379 55.961 3 0.28451432052671455 0.00039635354736424893 0.00013711651560784167 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 72760 13484 M[Oxidation]NSFVNDIFER True H1975_Epitope_Rep3 1386.62380073474 1386.62270993586 57.142 2 0.28449012209427377 0.00039635354736424893 0.00013719257380937963 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 48938 6792 KEEELQAALAR True NCI_RA007_Epitope_Rep2 1256.67246479888 1256.6708249037902 31.035 3 0.2844707436774504 0.00039635354736424893 0.00013725351264384916 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 2554 9989 AEQQALRLEV True H1975_Epitope_Rep2 1155.6247863304698 1155.62368993586 43.412 2 0.28443029385708857 0.00039635354736424893 0.00013738080151464251 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 136341 9743 WTDILSHGRY True H1975_Epitope_Rep2 1246.6094706195 1246.60836993586 42.464 2 0.28430792805539545 0.00039635354736424893 0.00013776658615068677 ['ENSG00000171316|ENST00000423902|CHD7'] 141319 4020 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61269490379 20.535 3 0.28430743099813177 0.00039635354736424893 0.00013776815544019392 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 43070 14279 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep4 1233.62748913285 1233.62638993586 62.826 2 0.2842656757238599 0.00039635354736424893 0.00013790004743674034 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 141442 11066 YTFSSIEREEY True H1975_Epitope_Rep2 1422.63032520338 1422.6292299358602 47.597 2 0.28424060237571036 0.00039635354736424893 0.00013797930710760743 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 24884 20276 FAYDGKDYLTL True PC9_epitope_Rep2 1304.6288686513997 1304.6277699358602 83.413 2 0.2842145139608782 0.00039635354736424893 0.0001380618239192475 ['ENSG00000204592|ENST00000376630|HLA-E'] 130202 10562 VSEQELLRY True H1975_Epitope_Rep2 1135.5873381925899 1135.58624993586 45.648 2 0.28418553851358447 0.00039635354736424893 0.00013815353021382853 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 137686 5597 YEKEEDWRNAA True H1975_Epitope_Rep3 1409.62115750201 1409.61952490379 26.569 3 0.2841567970686228 0.00039635354736424893 0.00013824455612970792 ['COPS4|p.P331Lfs*8|1|0.35|ENSG00000138663|chr4:83066541-83066541|C/-|frameshift_variant', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENSG00000138663|ENST00000264389|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 848 7556 ADDADEFGYSR True NCI_RA007_Epitope_Rep2 1244.4945600065598 1244.49346993586 34.016 2 0.2841032930706068 0.00039635354736424893 0.00013841416647659147 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 78352 14734 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6069699358602 61.493 2 0.2841022852080461 0.00039635354736424893 0.00013841736344903286 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 11845 8075 DHHENKYLL True PC9_epitope_Rep5 1167.56727145435 1167.56563490379 35.999 3 0.2840184282008998 0.00039635354736424893 0.0001386836196194916 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 137752 6625 YENEVALRQ True PC9_epitope_Rep6 1120.5512870370399 1120.55018993586 34.199 2 0.28395546968275087 0.00039635354736424893 0.0001388838573982468 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 2372 7485 AEQDELSQRLA True H1975_Epitope_Rep1 1258.61534384558 1258.61424993586 33.787 2 0.2839541795146112 0.00039635354736424893 0.00013888796376555407 ['ENSG00000255112|ENST00000526991|CHMP1B'] 23 16468 [Acetylation]-AAAAELSLLEK True H1975_Epitope_Rep3 1156.63395434814 1156.6328499358601 68.833 2 0.28388161016901353 0.00039635354736424893 0.00013911913436706868 ['EEF1E1|p.V79Sfs*4|1|0.18|ENSG00000124802|chr6:8097320-8097320|C/-|frameshift_variant', 'nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 29717 7179 FVM[Oxidation]EVEVDGQK True H1975_Epitope_Rep1 1295.60675368827 1295.6056499358601 32.635 2 0.2837798937233194 0.00039635354736424893 0.00013944380175905655 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 85199 5756 QEQAQTTDWRA True H1975_Epitope_Rep2 1332.60584179104 1332.6047499358601 27.137 2 0.28370771613529944 0.00039635354736424893 0.00013967464433717796 ['ENSG00000123739|ENST00000243501|PLA2G12A'] 77422 10178 NSLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep1 1318.5863525968596 1318.58524993586 43.601 2 0.28368748387186826 0.00039635354736424893 0.00013973942095042951 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 140887 10303 YSEDLSDMHY True H1975_Epitope_Rep2 1258.48121844154 1258.48012993586 44.637 2 0.2836316156974446 0.00039635354736424893 0.0001399184474432296 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 14665 5827 DVFRDPALKR True NCI_RA007_Epitope_Rep5 1215.6724052292298 1215.67075490379 29.099 3 0.2835831716742155 0.00039635354736424893 0.00014007386946881856 ['ENSG00000131469|ENST00000253788|RPL27'] 115859 5135 TSEDISQTSKY True H1975_Epitope_Rep2 1257.5724759740901 1257.57136993586 24.829 2 0.28357420563237146 0.00039635354736424893 0.00014010265399215874 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 109782 16786 TEDYLSLILNR True H1975_Epitope_Rep1 1335.7034305739899 1335.70232993586 69.968 2 0.2835599593523214 0.00039635354736424893 0.00014014840233557974 ['CON__P02769'] 24269 17474 EYTDVLQKI True PC9_epitope_Rep4 1107.58119018299 1107.58008993586 75.213 2 0.2835101263262863 0.00039635354736424893 0.00014030854621175794 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 88658 4683 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 23.109 2 0.28348273663592766 0.00039635354736424893 0.00014039664395946663 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 116252 17390 TTDFIYQLY True H1975_Epitope_Rep2 1162.55464108198 1162.55354993586 72.183 2 0.2834287205964236 0.00039635354736424893 0.00014057054648932863 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 29718 7591 FVM[Oxidation]EVEVDGQK True NCI_RA007_Epitope_Rep2 1295.60675368827 1295.6056499358601 34.15 2 0.28339783597859763 0.00039635354736424893 0.00014067007516854234 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 68424 11754 LTEVDNYHFY True H1975_Epitope_Rep3 1299.5771674317102 1299.57606993586 50.355 2 0.2833811574522071 0.00039635354736424893 0.0001407238526647818 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 49528 9923 KFIDTTSKF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 43.501 2 0.2833660431636955 0.00039635354736424893 0.00014077260427465663 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 25609 11268 FEM[Oxidation]SDFIVDTR True H1975_Epitope_Rep1 1374.6125673446998 1374.6114699358602 48.319 2 0.28335910268260195 0.00039635354736424893 0.00014079499667634824 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 78364 15070 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.6069699358602 63.101 2 0.28335228156339937 0.00039635354736424893 0.00014081700744873353 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 62319 11442 LLGELLQDNAK True H1975_Epitope_Rep1 1212.67140216972 1212.6703099358601 48.991 2 0.2832763158530031 0.00039635354736424893 0.00014106237077023693 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 12644 10081 DLDDAQRTLY True H1975_Epitope_Rep2 1208.5673310240002 1208.56622993586 43.769 2 0.2832698561945414 0.00039635354736424893 0.0001410832546931474 ['ENSG00000227124|ENST00000652011|ZNF717', 'ENST00000491507.1_1_3:75765690-75790926:-|nuORF'] 46026 9905 ISGLIYEETR True NCI_RA007_Epitope_Rep1 1179.6135529404298 1179.61244993586 42.532 2 0.2830778388716861 0.00039635354736424893 0.00014170545734680027 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 55064 14141 KYTKIFNDF True PC9_epitope_Rep2 1174.60225998074 1174.60116993586 59.664 2 0.2830739715542397 0.00039635354736424893 0.00014171801696929575 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 142447 17750 YYFEGIKQTF True PC9_epitope_Rep6 1294.6233893481397 1294.6222899358602 80.91 2 0.28305412951048975 0.00039635354736424893 0.0001417824741435967 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 74009 14144 NDEELNKLLGK True PC9_epitope_Rep5 1271.6721304457099 1271.67049490379 59.416 3 0.2830464780728096 0.00039635354736424893 0.00014180733779126561 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 95412 20430 RWFDKSFTF True PC9_epitope_Rep5 1232.59784330664 1232.59674993586 83.621 2 0.2830363889896831 0.00039635354736424893 0.00014184012933490827 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 77423 9832 NSLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep2 1318.5863525968596 1318.58524993586 42.869 2 0.28299003109538284 0.00039635354736424893 0.00014199089937003349 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 15269 7029 EAESSPFVER True NCI_RA007_Epitope_Rep1 1149.5302172392899 1149.52912993586 31.338 2 0.2829389741494279 0.00039635354736424893 0.000142157137782907 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 53684 8319 KSDVHLNFY True H1975_Epitope_Rep3 1121.55055876105 1121.54946993586 36.982 2 0.282882900002663 0.00039635354736424893 0.0001423399363715715 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 39740 13120 HLVDEPQNLIK True PC9_epitope_Rep5 1304.7088503076 1304.7072149037901 55.471 3 0.28287634707350995 0.00039635354736424893 0.0001423613139026829 ['CON__P02769'] 120835 8147 VELQELNDR True NCI_RA007_Epitope_Rep1 1114.5618517207397 1114.56074993586 35.689 2 0.28287298179504067 0.00039635354736424893 0.00014237229365347286 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 115794 9232 TSDHFETIMKY True H1975_Epitope_Rep1 1370.6176523446998 1370.61601490379 40.42 3 0.2828210827590593 0.00039635354736424893 0.00014254172979769218 ['ENSG00000136628|ENST00000366923|EPRS1'] 12888 12940 DLINNLGTIAK True H1975_Epitope_Rep3 1170.66083748602 1170.6597499358602 55.004 2 0.28281761766947816 0.00039635354736424893 0.0001425530495513282 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 141417 12908 YTEPNYWIRY True H1975_Epitope_Rep3 1403.65100107831 1403.64990993586 54.878 2 0.28280350391856707 0.00039635354736424893 0.00014259916564552774 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 84769 4458 QDVDNASLAR True NCI_RA007_Epitope_Rep4 1087.52580056519 1087.52470993586 23.522 2 0.28279326069388633 0.00039635354736424893 0.00014263264430715167 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 69632 14677 LVDPWTPHLY True H1975_Epitope_Rep3 1239.62880908175 1239.6277099358601 61.825 2 0.28276599402241104 0.00039635354736424893 0.00014272180026198364 ['ENSG00000010292|ENST00000315579|NCAPD2'] 1847 4342 AEIDNIKNQRA True H1975_Epitope_Rep3 1270.6629627443401 1270.66186993586 21.819 2 0.2826375745601051 0.00039635354736424893 0.00014314245394440905 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 116298 10736 TTDPYLTNSY True H1975_Epitope_Rep2 1173.5189838492502 1173.51788993586 46.323 2 0.2826322420558467 0.00039635354736424893 0.00014315994802485715 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 133984 7377 VYISEHEHF True NCI_RA007_Epitope_Rep2 1159.5298233164701 1159.5287299358602 33.319 2 0.28259925945035774 0.00039635354736424893 0.00014326819997443761 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 18773 7313 ELDAVQREY True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 33.069 2 0.2825826315072167 0.00039635354736424893 0.00014332280547599936 ['SMCHD1-NDC80|5|fusion', 'SMCHD1-NDC80|4|fusion', 'SMCHD1-NDC80|3|fusion', 'SMCHD1-NDC80|2|fusion', 'ENSG00000080986|ENST00000261597|NDC80', 'SMCHD1-NDC80|1|fusion'] 49160 7922 KELEPLKEMTA True H1975_Epitope_Rep3 1287.67443894483 1287.6733499358602 35.441 2 0.28251438360682 0.00039635354736424893 0.00014354714716019576 ['ENSG00000172081|ENST00000357066|MOB3A'] 4826 11830 ALEEQLQQIR True PC9_epitope_Rep6 1226.6619001151798 1226.66080993586 56.71 2 0.2824170161255983 0.00039635354736424893 0.00014386781809772874 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 66228 5053 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 24.518 2 0.2823920690459584 0.00039635354736424893 0.00014395009435994575 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 134226 20047 VYM[Oxidation]DWYEKF True PC9_epitope_Rep1 1295.55326156343 1295.55216993586 81.936 2 0.2823825350975125 0.00039635354736424893 0.00014398155006236111 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 98042 9284 SEQLDLPVRQA True H1975_Epitope_Rep2 1254.65681473474 1254.6557099358602 40.668 2 0.28235268193140783 0.00039635354736424893 0.00014408009020456643 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 18538 13682 EKLEATINELV True NCI_RA007_Epitope_Rep2 1257.68163250025 1257.68052993586 57.863 2 0.2823200696282491 0.00039635354736424893 0.00014418781493282326 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 10128 8905 AYVHMVTHF True NCI_RA007_Epitope_Rep4 1103.52223583823 1103.52167496793 41.084 1 0.28226926475188274 0.00039635354736424893 0.00014435579388242446 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 16451 4857 EELEEEQRTEE True NCI_RA007_Epitope_Rep2 1419.6001472739097 1419.5990499358602 23.516 2 0.2822286515507952 0.00039635354736424893 0.0001444902164050728 ['ENSG00000182534|ENST00000449428|MXRA7'] 49079 5585 KEIEEYIHKP True H1975_Epitope_Rep1 1284.6714021697198 1284.66976490379 26.548 3 0.2822278280521308 0.00039635354736424893 0.00014449294333580194 ['ENSG00000039123|ENST00000230640|MTREX'] 105843 8577 SSLNLRETNLD True NCI_RA007_Epitope_Rep4 1260.63099390972 1260.62988993586 39.776 2 0.2821797980823407 0.00039635354736424893 0.0001446520787685058 ['ENSG00000026025|ENST00000544301|VIM'] 78030 5073 NVSDAVAQSTR True NCI_RA007_Epitope_Rep2 1146.5629143499002 1146.56180993586 24.358 2 0.2821049791258626 0.00039635354736424893 0.00014490032244040166 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 49159 7990 KELEPLKEMTA True H1975_Epitope_Rep2 1287.67443894483 1287.6733499358602 35.682 2 0.2820542687616865 0.00039635354736424893 0.00014506881802599537 ['ENSG00000172081|ENST00000357066|MOB3A'] 52681 14194 KLVILEGELER True PC9_epitope_Rep4 1297.7605515272899 1297.7589149037901 62.503 3 0.2820477901132296 0.00039635354736424893 0.00014509035878786615 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 16083 12493 EEAENTLQSFR True PC9_epitope_Rep1 1322.61025846514 1322.60916993586 52.922 2 0.2820324814769631 0.00039635354736424893 0.00014514127096609304 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 25465 13589 FEELNADLFR True H1975_Epitope_Rep1 1252.6088019131598 1252.6077099358602 57.398 2 0.28199892796958104 0.00039635354736424893 0.0001452529229644088 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 108566 19995 SYNNFFRM[Oxidation]F True PC9_epitope_Rep2 1240.5335291783597 1240.5324299358601 82.313 2 0.2819257809427838 0.00039635354736424893 0.00014549662367556467 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 13850 6047 DQNTVETLQR True NCI_RA007_Epitope_Rep2 1202.58912909774 1202.58802993586 28.126 2 0.2818927772735379 0.00039635354736424893 0.00014560671448602728 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 86578 8164 QLEDGRTLSDY True H1975_Epitope_Rep2 1295.59935942827 1295.5982699358601 36.353 2 0.2818476014694032 0.00039635354736424893 0.00014575754325206453 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 29013 7196 FTENDKEYQEY True H1975_Epitope_Rep1 1464.6045043783597 1464.60340993586 32.696 2 0.28182066328938093 0.00039635354736424893 0.00014584755635768063 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 70055 16971 LVNELTEFAK True PC9_epitope_Rep2 1162.6233893481399 1162.6222899358602 70.525 2 0.2817805358860654 0.00039635354736424893 0.00014598174403483678 ['CON__P02769'] 4867 4857 ALEQQVEEM[Oxidation]K True H1975_Epitope_Rep3 1219.5754535599897 1219.57434993586 23.808 2 0.2817576472327903 0.00039635354736424893 0.00014605833996801158 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 17930 12434 EIAQDFKTDLR True PC9_epitope_Rep3 1334.68302948258 1334.6819299358601 52.853 2 0.2817301763281159 0.00039635354736424893 0.00014615032333300954 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 89826 18218 RAPFDLFENR True PC9_epitope_Rep5 1263.63601972051 1263.6343649037901 75.088 3 0.28172200376461665 0.00039635354736424893 0.00014617769947096722 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 7763 6376 ASREEILAQAK True PC9_epitope_Rep1 1214.66190011518 1214.66026490379 29.334 3 0.2816607158409518 0.00039635354736424893 0.0001463831630401069 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 142441 18885 YYFEGIKQTF True PC9_epitope_Rep4 1294.6233893481397 1294.6222899358602 80.727 2 0.28159976684781723 0.00039635354736424893 0.00014658777704805838 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 106203 12906 STDVSDLLHQY True H1975_Epitope_Rep1 1276.5935457718401 1276.59244993586 54.717 2 0.2815815719253883 0.00039635354736424893 0.00014664891533271485 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 22386 11967 ETEEGIYWRY True H1975_Epitope_Rep3 1344.5986311522797 1344.5975299358602 51.189 2 0.2815114091880924 0.00039635354736424893 0.00014688491411096415 ['nc|ENSG00000131650|Q8NCW0-6|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-4|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-3|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-5|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-2|KREMEN2', 'ENSG00000131650|ENST00000303746|KREMEN2'] 142629 20395 YYNPHLLLNTL True PC9_epitope_Rep2 1359.7186867153098 1359.7175899358601 83.875 2 0.2815007537765213 0.00039635354736424893 0.000146920787797032 ['ENSG00000205339|ENST00000379719|IPO7'] 135175 12224 WEQDGGRWLP True H1975_Epitope_Rep3 1242.5781704912197 1242.5770699358602 52.192 2 0.2814481629136472 0.00039635354736424893 0.00014709797451067732 ['ENSG00000166592|ENST00000299759|RRAD'] 57577 7017 LEDTLAETEAR True H1975_Epitope_Rep3 1246.60411045554 1246.6030099358602 31.955 2 0.2814272019553694 0.00039635354736424893 0.00014716865480718077 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 54028 13151 KVIDDTNITRL True PC9_epitope_Rep5 1286.7194149913 1286.71777490379 55.589 3 0.28137941161697744 0.00039635354736424893 0.00014732993084100437 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 85198 5643 QEQAQTTDWRA True H1975_Epitope_Rep2 1332.60584179104 1332.6047499358601 26.705 2 0.2813788545194636 0.00039635354736424893 0.00014733181189719474 ['ENSG00000123739|ENST00000243501|PLA2G12A'] 35950 5484 GTTHNFLYK True NCI_RA007_Epitope_Rep4 1079.5399940773498 1079.5388899358602 27.679 2 0.2813704374894593 0.00039635354736424893 0.00014736023517298097 ['ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C', 'ENST00000599239.5_1_19:48565437-48599986:-|nuORF'] 81370 9596 PLDHLKPLEY True H1975_Epitope_Rep2 1223.65502382959 1223.65392993586 41.886 2 0.2812557533454202 0.00039635354736424893 0.0001477480567640152 ['ENSG00000135763|ENST00000258243|URB2'] 15023 11899 DYLEKYYKF True NCI_RA007_Epitope_Rep4 1267.6124903112698 1267.6113899358602 52.77 2 0.28123634932494096 0.00039635354736424893 0.00014781377534400677 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 137739 6515 YENEVALRQ True NCI_RA007_Epitope_Rep1 1120.5512870370399 1120.55018993586 29.357 2 0.2811579846187202 0.00039635354736424893 0.0001480794829889905 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 29201 8534 FTSIGEDYDER True NCI_RA007_Epitope_Rep2 1330.5677249468197 1330.5666299358602 37.84 2 0.2811012612600537 0.00039635354736424893 0.0001482721105385582 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 28105 12515 FQYDHEAFL True H1975_Epitope_Rep2 1168.5189242795998 1168.5178299358602 53.232 2 0.2810446269639834 0.00039635354736424893 0.00014846468587683258 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 3502 9750 [Acetylation]-AGLNSLEAVKR True H1975_Epitope_Rep1 1198.66698581192 1198.6658899358602 42.434 2 0.2810139324750909 0.00039635354736424893 0.00014856916188831813 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 57309 6846 LEAAIADAEQR True H1975_Epitope_Rep3 1185.59896550545 1185.5978699358602 31.291 2 0.2809332537900805 0.00039635354736424893 0.00014884412210517862 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 137043 9606 YALYDATYETK True H1975_Epitope_Rep1 1336.61869789052 1336.6176099358602 41.876 2 0.2809329670668801 0.00039635354736424893 0.00014884510019145357 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 118014 18301 TYDYNFHSF True PC9_epitope_Rep5 1192.48253877088 1192.4814499358602 75.409 2 0.2809323652433622 0.00039635354736424893 0.00014884715318654276 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 98151 4052 SESPKEPEQLR True NCI_RA007_Epitope_Rep2 1298.64664397386 1298.6449949037901 20.4 3 0.2809239180325429 0.00039635354736424893 0.00014887597207117453 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 49085 5797 KEIEEYIHKP True H1975_Epitope_Rep3 1284.6714021697198 1284.66976490379 27.322 3 0.2808537574435049 0.00039635354736424893 0.00014911555104776909 ['ENSG00000039123|ENST00000230640|MTREX'] 11528 11952 DFM[Oxidation]IQGGDFTR True NCI_RA007_Epitope_Rep1 1301.5710368858895 1301.56992993586 50.476 2 0.28083859227870167 0.00039635354736424893 0.00014916738658851106 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 43068 14964 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep2 1233.62748913285 1233.62638993586 62.817 2 0.28076486259798117 0.00039635354736424893 0.0001494196566707516 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 24009 11411 EYMKHTRLF True PC9_epitope_Rep5 1223.6121134717898 1223.61046490379 48.892 3 0.2806368061917543 0.00039635354736424893 0.00014985882402737433 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 98374 11458 SEYMRNGDFLP True H1975_Epitope_Rep3 1327.5866865695898 1327.58558993586 49.192 2 0.2806149727627335 0.00039635354736424893 0.0001499338302427096 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'ENST00000462970.5_1_1:151227258-151237442:+|nuORF', 'ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 24961 6820 FDDAVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep1 1269.55471811541 1269.55362993586 30.535 2 0.2805468617693038 0.00039635354736424893 0.0001501680592302572 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 61538 4287 LKGDDLQAIKK True NCI_RA007_Epitope_Rep4 1227.7186867153098 1227.71704490379 22.824 3 0.2805432746919093 0.00039635354736424893 0.00015018040508929964 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 118243 14425 TYLEKAIKI True PC9_epitope_Rep1 1077.6433965167298 1077.6422899358602 60.309 2 0.2804805624886475 0.00039635354736424893 0.00015039640966628954 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 78407 16291 NYLNHWNHF True PC9_epitope_Rep5 1243.55229009655 1243.55065490379 67.657 3 0.2804535261154685 0.00039635354736424893 0.00015048962908865694 ['ENSG00000167363|ENST00000300784|FN3K'] 38473 5116 HEQEILHRDL True H1975_Epitope_Rep3 1288.6523980606398 1288.65076490379 24.789 3 0.2804228995591908 0.00039635354736424893 0.000150595297069978 ['ENSG00000145632|ENST00000274289|PLK2', 'ENST00000515415.5_1_5:57754112-57754961:-|nuORF'] 25212 12340 FDEESYSLLR True NCI_RA007_Epitope_Rep1 1257.5877321154098 1257.5866299358602 51.972 2 0.2804176335490702 0.00039635354736424893 0.00015061347338060912 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 39086 5628 HHTFYNELR True NCI_RA007_Epitope_Rep4 1215.57850484439 1215.57685490379 28.25 3 0.28040354775857285 0.00039635354736424893 0.0001506621030907307 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 28526 8416 FSEEQLNRY True H1975_Epitope_Rep2 1184.5462016565998 1184.5451099358602 37.327 2 0.28038334571810286 0.00039635354736424893 0.0001507318759485879 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 119414 9815 VAQLEQVYIR True NCI_RA007_Epitope_Rep5 1217.6768219033297 1217.67572993586 44.399 2 0.280349484462422 0.00039635354736424893 0.00015084889691408996 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 53400 20142 KQVEEIFNLKF True PC9_epitope_Rep3 1393.7605515272896 1393.7589149037901 82.73 3 0.2803379976133088 0.00039635354736424893 0.0001508886149206365 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 39728 8180 HLVDEPQNLIK True NCI_RA007_Epitope_Rep5 1304.7088503076 1304.7072149037901 38.145 3 0.28031019135978963 0.00039635354736424893 0.00015098480377769547 ['CON__P02769'] 108732 5142 SYRQSSATSSF True NCI_RA007_Epitope_Rep5 1219.5469299325898 1219.5458299358602 26.474 2 0.28030217541667 0.00039635354736424893 0.0001510125443469274 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 77580 10717 NTDPWAGYRY True H1975_Epitope_Rep1 1241.5465360097699 1241.54542993586 46.184 2 0.28025369924056653 0.00039635354736424893 0.00015118041336722912 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 78353 14829 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6069699358602 61.859 2 0.28021813114360544 0.00039635354736424893 0.00015130370156985477 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 11055 14224 DAVLLVFANK True H1975_Epitope_Rep1 1088.62299542532 1088.62188993586 59.891 2 0.28015558467557417 0.00039635354736424893 0.00015152074793000166 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 54204 4371 KVVENVIAK True NCI_RA007_Epitope_Rep4 998.6124307416198 998.61132993586 23.161 2 0.28013463411635214 0.00039635354736424893 0.0001515935194223175 ['ENSG00000046889|ENST00000288368|PREX2', 'ENST00000517617.1_1_8:68864752-69023167:+|nuORF', 'nc|ENSG00000046889|Q70Z35-3|PREX2', 'ENST00000529398.5_1_8:68864629-69017594:+|nuORF', 'nc|ENSG00000046889|Q70Z35-4|PREX2'] 26484 13694 FIEFASFEDAK True H1975_Epitope_Rep1 1302.61321858726 1302.6121299358601 57.81 2 0.2801271387303774 0.00039635354736424893 0.00015161956304386034 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 21034 6591 EQSVQEIPVSR True H1975_Epitope_Rep1 1270.6517293542997 1270.65062993586 30.413 2 0.2800374754349426 0.00039635354736424893 0.00015193145644643317 ['CON__P06868'] 118008 17575 TYDYNFHSF True PC9_epitope_Rep2 1192.48253877088 1192.4814499358602 72.878 2 0.2800290071461832 0.00039635354736424893 0.00015196094652735717 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 53993 5204 KVFAGYYTK True NCI_RA007_Epitope_Rep3 1075.57023157647 1075.56912993586 27.468 2 0.2799706430227424 0.00039635354736424893 0.00015216435042196522 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 19364 12801 ELLLQPVTISR True H1975_Epitope_Rep3 1267.74998684359 1267.74888993586 54.456 2 0.27995267058189083 0.00039635354736424893 0.000152227040764153 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'nc|ENSG00000241553|P59998-2|ARPC4'] 54993 10889 KYQIINEEF True NCI_RA007_Epitope_Rep3 1182.5920892198599 1182.59098993586 49.907 2 0.27992287120838494 0.00039635354736424893 0.00015233104205195726 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 49536 9481 KFIDTTSKF True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 44.078 2 0.27990080956460206 0.00039635354736424893 0.00015240808410031082 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 28532 12015 FSEIDLEKY True H1975_Epitope_Rep2 1142.54955570154 1142.5484499358602 51.295 2 0.27987552801721616 0.00039635354736424893 0.00015249641842077894 ['ENSG00000178700|ENST00000314636|DHFR2'] 12705 5754 DLEAHIDSANK True NCI_RA007_Epitope_Rep1 1211.57823006087 1211.57712993586 26.438 2 0.27969501465359886 0.00039635354736424893 0.00015312862756016658 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 75913 9187 NLQYYDISAK True H1975_Epitope_Rep3 1213.5979028762902 1213.5968099358602 40.328 2 0.27961832812896364 0.00039635354736424893 0.00015339799904008728 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 133851 20409 VYGNERFIQYL True PC9_epitope_Rep5 1400.7088503075997 1400.7077499358602 83.542 2 0.27945094655329356 0.00039635354736424893 0.00015398759759071618 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 54182 5511 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61116490379 27.886 3 0.2794177845366922 0.00039635354736424893 0.00015410467917240556 ['ENSG00000057608|ENST00000380191|GDI2'] 70050 11384 LVNELTEFAK True NCI_RA007_Epitope_Rep4 1162.6233893481399 1162.6222899358602 50.702 2 0.2794064867456252 0.00039635354736424893 0.00015414458742269262 ['CON__P02769'] 5786 13044 APDFVFYAPR True H1975_Epitope_Rep1 1181.5869442697697 1181.58584993586 55.259 2 0.2794020851765826 0.00039635354736424893 0.00015416013829960254 ['ENSG00000092820|ENST00000367075|EZR', 'ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 52676 13489 KLVIIESDLER True PC9_epitope_Rep2 1313.75546614685 1313.75383490379 57.171 3 0.27937813587057275 0.00039635354736424893 0.00015424477944947032 ['ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 45483 11131 IQLVEEELDR True NCI_RA007_Epitope_Rep1 1242.6455813446998 1242.64448993586 47.297 2 0.2793623846196845 0.00039635354736424893 0.00015430047255886748 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 106703 4610 STTTGHLIYK True NCI_RA007_Epitope_Rep4 1119.5924235730301 1119.5913299358601 24.144 2 0.2792663536491307 0.00039635354736424893 0.00015464045363892847 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2'] 113795 8793 TNAENEFVTIK True NCI_RA007_Epitope_Rep4 1264.6299312805597 1264.62882993586 40.633 2 0.2792248596717677 0.00039635354736424893 0.0001547875878328405 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 95905 18197 RYLDWIKKI True PC9_epitope_Rep2 1233.7233781729299 1233.7217249037901 75.301 3 0.2792053235129971 0.00039635354736424893 0.00015485690994440887 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 61986 12247 LLDPKYGMFRY True H1975_Epitope_Rep2 1401.7114931598899 1401.70984490379 52.19 3 0.27918930469377745 0.00039635354736424893 0.0001549137743170412 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 107835 10219 SVVDHFNRI True PC9_epitope_Rep4 1085.56179215109 1085.5606899358602 46.986 2 0.27909369340976353 0.00039635354736424893 0.00015525361484193726 ['ENSG00000103035|ENST00000219313|PSMD7', 'ENST00000566015.1_1_16:74330767-74334139:+|nuORF', 'ENST00000422197.2_1_1:51837944-51838202:+|nuORF'] 95914 5627 RYLEKNVKL True NCI_RA007_Epitope_Rep4 1161.6869926642098 1161.6853349037901 28.246 3 0.2790905172070266 0.00039635354736424893 0.00015526491712911176 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 130205 10260 VSERDVYLTY True H1975_Epitope_Rep2 1243.6084675599898 1243.60736993586 44.471 2 0.2790359685494553 0.00039635354736424893 0.00015545915317317726 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD', 'ENST00000472677.1_1_22:50636123-50636456:+|nuORF'] 24070 19798 EYNSDLHQFF True PC9_epitope_Rep5 1298.5567663402996 1298.5556699358601 81.198 2 0.278995830253156 0.00039635354736424893 0.0001556022323541897 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 88567 12729 QTDIQGALSAY True H1975_Epitope_Rep2 1165.5615173675699 1165.5604299358602 54.065 2 0.2789926003252411 0.00039635354736424893 0.00015561375166253224 ['ENSG00000198730|ENST00000361367|CTR9'] 103357 7922 SPNSYFM[Oxidation]DVK True H1975_Epitope_Rep1 1202.52777509158 1202.5266699358601 35.423 2 0.2789882264699038 0.00039635354736424893 0.00015562935206754757 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 118562 20412 TYQRWQFTL True PC9_epitope_Rep1 1241.61930702721 1241.61820993586 83.327 2 0.2789632445097242 0.00039635354736424893 0.00015571848624043724 ['ENSG00000174231|ENST00000304992|PRPF8'] 9120 14516 AVIVLVENFYK True NCI_RA007_Epitope_Rep3 1293.7332741502898 1293.7321699358602 64.404 2 0.2789371630395709 0.00039635354736424893 0.00015581159793161614 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 39085 6015 HHTFYNELR True NCI_RA007_Epitope_Rep2 1215.57850484439 1215.57685490379 28.006 3 0.2789179194215523 0.00039635354736424893 0.00015588033400205033 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 53294 13928 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6745149037902 61.478 3 0.2789147384512436 0.00039635354736424893 0.00015589169899874201 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 141424 6474 YTETEPYHNY True H1975_Epitope_Rep1 1315.5356965425499 1315.5345899358601 29.964 2 0.2788991721368609 0.00039635354736424893 0.0001559473264170923 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 53397 20197 KQVEEIFNLKF True PC9_epitope_Rep1 1393.7605515272896 1393.7594499358602 82.517 2 0.2788894781887147 0.00039635354736424893 0.0001559819785248469 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 15678 8035 EATTEFSVDAR True NCI_RA007_Epitope_Rep1 1224.56224564356 1224.5611499358602 35.252 2 0.278869156446385 0.00039635354736424893 0.00015605464589761402 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 93694 16020 RQVAFDFTKV True PC9_epitope_Rep5 1209.65060715549 1209.64897490379 66.611 3 0.2788669196961237 0.00039635354736424893 0.0001560626462369471 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 26880 11697 FLDGIYVSEK True H1975_Epitope_Rep3 1169.59684024713 1169.59574993586 50.132 2 0.2788373602837611 0.00039635354736424893 0.00015616841200768148 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 107977 7823 SVYVYKVLK True NCI_RA007_Epitope_Rep4 1097.6484818971696 1097.64738993586 36.781 2 0.27878208216426975 0.00039635354736424893 0.00015636639383295183 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.V49F|1|0.11|ENSG00000158373|chr6:26158314-26158314|G/T|missense_variant'] 139113 12408 YLDPAQQNLY True H1975_Epitope_Rep2 1223.5822528121503 1223.5811499358601 52.813 2 0.2787454881597875 0.00039635354736424893 0.0001564975956154934 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 137534 5741 YEEIDNAPEER True H1975_Epitope_Rep1 1363.5891886673896 1363.5880899358601 27.151 2 0.27870992306376163 0.00039635354736424893 0.00015662521402163234 ['ENSG00000178952|ENST00000313511|TUFM'] 114017 12829 TPAQFDADELR True PC9_epitope_Rep2 1261.5938801250097 1261.59278993586 54.649 2 0.2787012419089316 0.00039635354736424893 0.00015665638046745783 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 61975 10596 LLDPAQRTLY True H1975_Epitope_Rep2 1188.65027280232 1188.64916993586 45.78 2 0.2786960206907852 0.00039635354736424893 0.00015667512829215208 ['ZNF557|p.K348Tfs*8|1|0.09|ENSG00000130544|chr19:7083512-7083513|-/AACTCAC|frameshift_variant', 'nc|ENSG00000130544|Q8N988|ZNF557', 'ENSG00000130544|ENST00000252840|ZNF557', 'ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF'] 48358 13229 IYSVFRNAASF True NCI_RA007_Epitope_Rep4 1273.6455217750497 1273.6444299358602 58.013 2 0.2786307040051215 0.00039635354736424893 0.0001569098507705058 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 71881 11502 M[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1214.5641606002998 1214.56306993586 49.227 2 0.27862787311266335 0.00039635354736424893 0.00015692003184045912 ['CON__P02769'] 84646 13167 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 55.742 2 0.27862501414580537 0.00039635354736424893 0.0001569303145488786 ['CON__P12763'] 28862 7538 FTDEEGYGRY True H1975_Epitope_Rep2 1235.50948179471 1235.5083899358601 33.946 2 0.2785712319510863 0.00039635354736424893 0.00015712387613221976 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 7177 5444 AQYEEIAQRS True H1975_Epitope_Rep2 1193.5676653771698 1193.5665699358601 25.967 2 0.2785541481407598 0.00039635354736424893 0.00015718541060103796 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 72688 6048 MMDPNSTQRY True H1975_Epitope_Rep2 1241.51689275761 1241.51578993586 28.243 2 0.2785463488747296 0.00039635354736424893 0.00015721351093160048 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 24236 5528 EYSKQMQRF True PC9_epitope_Rep4 1215.57064258263 1215.56954993586 28.028 2 0.27854561381580306 0.00039635354736424893 0.00015721615956818246 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 129134 16711 VQQTVQDLFGR True PC9_epitope_Rep5 1289.67279915205 1289.67170993586 69.285 2 0.2785212441801058 0.00039635354736424893 0.00015730399593137897 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 54087 11607 KVLEDQQNIRL True PC9_epitope_Rep1 1354.75686312918 1354.75522490379 49.525 3 0.2784776306134549 0.00039635354736424893 0.0001574613165545367 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32'] 119660 5326 VAVEEVDEEGK True H1975_Epitope_Rep3 1202.5666623176596 1202.5655699358601 25.559 2 0.2784550648940677 0.00039635354736424893 0.0001575427762850728 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 115840 7476 TSDVDLDKY True H1975_Epitope_Rep2 1054.4818700645399 1054.48076993586 33.704 2 0.2784230057890159 0.00039635354736424893 0.0001576585786317034 ['ENST00000564709.5_1_16:1827100-1828401:-|nuORF', 'ENSG00000162032|ENST00000566339|SPSB3', 'ENST00000569380.5_1_16:1827941-1828049:-|nuORF'] 74908 15708 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69592490379 65.695 3 0.2784196096214047 0.00039635354736424893 0.00015767085109471868 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 55060 9379 KYTKIFNDF True NCI_RA007_Epitope_Rep3 1174.60225998074 1174.60116993586 43.983 2 0.27837055066647887 0.00039635354736424893 0.00015784823830192093 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 14285 16140 DSTLIM[Oxidation]QLLR True H1975_Epitope_Rep3 1204.6485589305998 1204.64746993586 67.539 2 0.27832658384588443 0.00039635354736424893 0.00015800738314684736 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 90423 16602 REIFLSQPILL True H1975_Epitope_Rep2 1327.7863723523099 1327.78526993586 69.088 2 0.2783110688305674 0.00039635354736424893 0.00015806358052891659 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 141740 20068 YTYEELLNRV True PC9_epitope_Rep2 1298.65066672514 1298.6495699358602 82.597 2 0.27828580839191125 0.00039635354736424893 0.00015815511990299958 ['ENSG00000125977|ENST00000374980|EIF2S2'] 85423 12491 QEYEALLNIK True NCI_RA007_Epitope_Rep1 1219.6448530687096 1219.6437499358601 52.565 2 0.2782718122921141 0.00039635354736424893 0.00015820586214821306 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 11489 6226 DFHVDEQTTVK True H1975_Epitope_Rep1 1317.62009487285 1317.61843490379 29.016 3 0.2781576471179625 0.00039635354736424893 0.00015862037214083277 ['CON__P34955'] 61908 7467 LLDEHHISY True H1975_Epitope_Rep3 1125.54547338061 1125.54436993586 33.7 2 0.27815214039194536 0.00039635354736424893 0.0001586403933820409 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 15197 8558 EADEYLDKY True H1975_Epitope_Rep2 1144.49243474824 1144.4913299358602 37.875 2 0.2781490478243489 0.00039635354736424893 0.000158651638385096 ['ENSG00000117724|ENST00000366955|CENPF'] 14011 18976 DRFFSEYEKL True PC9_epitope_Rep1 1332.6350166609998 1332.6333749037901 77.777 3 0.2781083220774176 0.00039635354736424893 0.00015879979729911618 ['ENSG00000135932|ENST00000258418|CAB39'] 137738 5910 YENEVALRQ True H1975_Epitope_Rep2 1120.5512870370399 1120.55018993586 27.719 2 0.2780861034130005 0.00039635354736424893 0.00015888068645487439 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 137145 16950 YAVEGRDLTL True PC9_epitope_Rep3 1135.5873381925899 1135.58624993586 70.356 2 0.27801674015158373 0.00039635354736424893 0.00015913347548935955 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 49541 8942 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 44.378 2 0.27800142348449397 0.00039635354736424893 0.00015918935014983592 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 22058 5875 ESLQQM[Oxidation]AEVTR True H1975_Epitope_Rep3 1306.6187153542999 1306.6176099358602 27.609 2 0.27799459897128315 0.00039635354736424893 0.0001592142520579431 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 11938 18233 DHMRFISEL True PC9_epitope_Rep5 1146.54917886206 1146.5480899358602 75.146 2 0.27795507195684926 0.00039635354736424893 0.00015935855857165485 ['ENSG00000273749|ENST00000617928|CYFIP1'] 103178 12214 SPIENIQRVAA True PC9_epitope_Rep4 1196.6513354314802 1196.6502299358601 54.8 2 0.27793860019786804 0.00039635354736424893 0.00015941873285414216 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 49380 6685 KESYSVYVYK True NCI_RA007_Epitope_Rep5 1264.6339540318397 1264.63231490379 32.383 3 0.27793134147525445 0.00039635354736424893 0.0001594452574872077 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 137737 5801 YENEVALRQ True H1975_Epitope_Rep2 1120.5512870370399 1120.55018993586 27.302 2 0.2779255673518678 0.00039635354736424893 0.0001594663602921392 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 23968 11533 EYLTKVDKL True PC9_epitope_Rep5 1107.6175756917098 1107.61646993586 49.358 2 0.27786844294250834 0.00039635354736424893 0.00015967528475337186 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 54958 6040 KYQEVTNNL True NCI_RA007_Epitope_Rep3 1107.5560380643099 1107.5549499358601 30.738 2 0.27786159582898856 0.00039635354736424893 0.00015970034548962568 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 54021 13214 KVIDDTNITRL True PC9_epitope_Rep1 1286.7194149913 1286.71777490379 55.691 3 0.2777516908839666 0.00039635354736424893 0.00016010314172764512 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 54987 7619 KYQEYTNEL True NCI_RA007_Epitope_Rep4 1186.5506183307 1186.5495299358602 35.96 2 0.2776657245360175 0.00039635354736424893 0.0001604189129956329 ['ENSG00000183735|ENST00000331710|TBK1', 'ENST00000545392.1_1_12:64890804-64891535:+|nuORF'] 56849 20829 LDPFLLFDEFK True H1975_Epitope_Rep1 1382.7122043525399 1382.7111099358601 86.559 2 0.2776600342264715 0.00039635354736424893 0.0001604398366083892 ['ENST00000471725.1_1_X:15496691-15511410:-|nuORF', 'ENST00000476381.5_1_X:15447791-15497935:-|nuORF', 'ENSG00000087842|ENST00000380420|PIR'] 7165 5016 AQYEDIAQKS True NCI_RA007_Epitope_Rep3 1151.5458673034298 1151.5447699358601 26.726 2 0.2776170398716488 0.00039635354736424893 0.00016059801779456454 ['ENSG00000167768|ENST00000252244|KRT1'] 54586 12977 KYITQGQLLQF True NCI_RA007_Epitope_Rep3 1337.73433677945 1337.7332299358602 58.319 2 0.2775884806990431 0.00039635354736424893 0.00016070317657740325 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 70315 8134 LVSESSDVLPK True NCI_RA007_Epitope_Rep2 1172.6288686514001 1172.6277699358602 36.273 2 0.27758096307810276 0.00039635354736424893 0.00016073086894673042 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 30194 20036 FYQRFPLSF True PC9_epitope_Rep4 1203.6076797143498 1203.60658993586 85.206 2 0.2775450260031287 0.00039635354736424893 0.00016086331498201703 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 1508 13228 [Acetylation]-AEELVLER True H1975_Epitope_Rep3 999.5236756231699 999.52256993586 56.137 2 0.27752498034761125 0.00039635354736424893 0.00016093724068308408 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 53328 19342 KQMEQISQFL True PC9_epitope_Rep5 1250.6329084860197 1250.63180993586 79.443 2 0.27752127438009805 0.00039635354736424893 0.00016095091152141042 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 61493 4483 LKDDEVAQLKK True NCI_RA007_Epitope_Rep2 1285.7241660185698 1285.7225249037901 22.07 3 0.2774347598427556 0.00039635354736424893 0.000161270383130463 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 115757 6722 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 30.77 2 0.27741032888301337 0.00039635354736424893 0.00016136071406124366 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 137574 6176 YEENSHLTSV True H1975_Epitope_Rep2 1177.52513185885 1177.5240299358602 28.726 2 0.2774082984462836 0.00039635354736424893 0.00016136822366929666 ['ENSG00000157557|ENST00000360938|ETS2'] 20831 8716 EQISDIDDAVR True H1975_Epitope_Rep3 1259.59935942827 1259.5982699358601 38.527 2 0.277395120013558 0.00039635354736424893 0.0001614169728545192 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 72681 5751 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 27.148 2 0.27738499064907823 0.00039635354736424893 0.00016145445305791272 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 134014 10538 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 45.474 3 0.27737054197441535 0.00039635354736424893 0.0001615079304509079 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 68439 5087 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 24.649 2 0.2773681964796566 0.00039635354736424893 0.0001615166132622754 ['ENSG00000124570|ENST00000380539|SERPINB6'] 116319 8656 TTEESLRNYY True H1975_Epitope_Rep2 1274.5778957077 1274.57678993586 38.254 2 0.27736698899710766 0.00039635354736424893 0.00016152108343667345 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 68944 9208 LTPEEEEILNK True H1975_Epitope_Rep1 1313.6714617393698 1313.6703699358602 40.326 2 0.27736626074958687 0.00039635354736424893 0.00016152377951350665 ['ENSG00000142937|ENST00000396651|RPS8'] 6445 14798 APSDLYQIILK True H1975_Epitope_Rep1 1259.7125387057101 1259.7114499358602 62.146 2 0.2773417800872362 0.00039635354736424893 0.00016161443665827435 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953662-64954841:+|nuORF'] 108696 8046 SYRDSYESY True PC9_epitope_Rep4 1168.4672826295598 1168.46618993586 38.399 2 0.2773061568968193 0.00039635354736424893 0.0001617464479841792 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 116331 10340 TTESFEDGLKY True H1975_Epitope_Rep2 1288.5823123818 1288.5812099358602 44.781 2 0.27727459728663056 0.00039635354736424893 0.0001618634908064832 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1'] 77421 9495 NSLESYAFNM[Oxidation]K True H1975_Epitope_Rep3 1318.5863525968596 1318.58524993586 41.528 2 0.27723727130210435 0.00039635354736424893 0.0001620020284173873 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 89006 10685 QVISQAAVVHA True PC9_epitope_Rep5 1121.61930702721 1121.61820993586 46.091 2 0.27719502329574247 0.00039635354736424893 0.0001621589776409266 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 42041 10517 IDIIPNPQER True NCI_RA007_Epitope_Rep2 1193.64043639461 1193.6393299358601 45.505 2 0.27718602050554153 0.00039635354736424893 0.0001621924422267056 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 126911 7872 VLQSFTVDSSK True H1975_Epitope_Rep1 1209.62411762413 1209.6230299358601 35.23 2 0.27714954973559053 0.00039635354736424893 0.0001623280797555163 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 1575 10104 AEEVLLGVHAA True H1975_Epitope_Rep2 1107.5924235730297 1107.5913299358601 43.859 2 0.27713567298574987 0.00039635354736424893 0.00016237971825021713 ['nc|ENSG00000163626|Q8N8Q8-2|COX18', 'nc|ENSG00000163626|Q8N8Q8-3|COX18', 'ENST00000421792.2_1_4:73934271-73935366:-|nuORF', 'nc|ENSG00000163626|Q8N8Q8-4|COX18', 'nc|ENSG00000163626|Q8N8Q8|COX18', 'ENSG00000163626|ENST00000507544|COX18'] 48924 12871 KEEDVLKFLAA True H1975_Epitope_Rep3 1261.69180326113 1261.69070993586 54.732 2 0.27707023389238067 0.00039635354736424893 0.00016262345351544 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 126057 4969 VLEEGSVEAR True NCI_RA007_Epitope_Rep5 1087.5509526838698 1087.54984993586 25.815 2 0.27706195713922865 0.00039635354736424893 0.0001626543072967961 ['ENSG00000007080|ENST00000445755|CCDC124'] 53708 7355 KSIDFPLTK True NCI_RA007_Epitope_Rep3 1047.59644632431 1047.5953499358602 36.055 2 0.2769790903315738 0.00039635354736424893 0.00016296353845949926 ['ENSG00000084073|ENST00000372759|ZMPSTE24'] 138069 15147 YGEPSEVFINR True PC9_epitope_Rep5 1309.6302656337298 1309.62916993586 63.27 2 0.2769304219623905 0.00039635354736424893 0.0001631454268008928 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 66229 5149 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 24.883 2 0.27681379934874634 0.00039635354736424893 0.0001635821081373064 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 134016 10412 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5287299358602 44.988 2 0.27681285417576135 0.00039635354736424893 0.0001635856520164441 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 70051 11357 LVNELTEFAK True NCI_RA007_Epitope_Rep5 1162.6233893481399 1162.6222899358602 50.336 2 0.27670965386489216 0.00039635354736424893 0.0001639730592240674 ['CON__P02769'] 54183 5428 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61172993586 27.566 2 0.2767000435852582 0.00039635354736424893 0.0001640091823050594 ['ENSG00000057608|ENST00000380191|GDI2'] 95703 21378 RYFLPPYTF True PC9_epitope_Rep5 1202.6124307416196 1202.61132993586 87.292 2 0.27667902388879284 0.00039635354736424893 0.00016408821883107753 ['ENSG00000023608|ENST00000216294|SNAPC1'] 139157 9244 YLDYDDTRY True H1975_Epitope_Rep1 1222.51423282198 1222.5131299358602 40.468 2 0.2766456108255144 0.00039635354736424893 0.00016421393436926053 ['ENSG00000184967|ENST00000330579|NOC4L', 'NOC4L|p.W207*|1|0.17|ENSG00000184967|chr12:132147896-132147896|G/-|frameshift_variant', 'ENST00000535343.5_1_12:132632219-132636084:+|nuORF'] 71543 19075 M[Oxidation]ALDIEIATYR True PC9_epitope_Rep1 1310.6540382338599 1310.65294993586 78.161 2 0.2766446694955009 0.00039635354736424893 0.0001642174774884397 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 68420 11761 LTEVDNYHFY True H1975_Epitope_Rep1 1299.5771674317102 1299.57606993586 50.23 2 0.2766360539887016 0.00039635354736424893 0.0001642499093823012 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 27130 22525 FLITILDHL True PC9_epitope_Rep2 1083.63283183303 1083.6317299358602 92.134 2 0.27659896995702443 0.00039635354736424893 0.0001643895803600321 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1', 'ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 52678 16214 KLVILEGELER True PC9_epitope_Rep1 1297.7605515272899 1297.7589149037901 67.184 3 0.2765964359731043 0.00039635354736424893 0.00016439912853793946 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 27484 8210 FMEKETPLRY True H1975_Epitope_Rep2 1312.6485585501598 1312.64692490379 36.533 3 0.27659468789223296 0.00039635354736424893 0.00016440571571757931 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 7877 10054 [Acetylation]-ATAEVLNIGKK True H1975_Epitope_Rep3 1184.6764878664596 1184.67538993586 43.709 2 0.27658608018350755 0.00039635354736424893 0.0001644381554420473 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 78157 12089 NYAQVLDKF True NCI_RA007_Epitope_Rep3 1096.5553097883198 1096.5542099358602 54.671 2 0.27657597632275155 0.00039635354736424893 0.00016447624186567353 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 137201 12566 YAYDGKDYLAL True NCI_RA007_Epitope_Rep5 1290.6132185872598 1290.6121299358601 54.989 2 0.27654516452764144 0.00039635354736424893 0.00016459244122905711 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 95424 16151 RWFQPAIPSW True NCI_RA007_Epitope_Rep4 1286.6560268890996 1286.65492993586 70.042 2 0.276537370131522 0.00039635354736424893 0.0001646218489657911 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 134008 9037 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5287299358602 40.108 2 0.2765162335575868 0.00039635354736424893 0.00016470162232855277 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 38736 7888 HGIPIPVTPK True NCI_RA007_Epitope_Rep2 1057.62841515893 1057.62730993586 35.314 2 0.2764779023357512 0.00039635354736424893 0.00016484639024740984 ['ENSG00000130707|ENST00000352480|ASS1', 'ENST00000467695.5_1_9:133333919-133355188:+|nuORF', 'ASS1|p.I268Sfs*52|1|0.08|ENSG00000130707|chr9:130480413-130480414|-/G|frameshift_variant'] 53396 20191 KQVEEIFNLKF True PC9_epitope_Rep1 1393.7605515272896 1393.7589149037901 82.493 3 0.2764636739297194 0.00039635354736424893 0.00016490015997453096 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 89519 9943 QYLEQSSKL True PC9_epitope_Rep5 1094.56078909158 1094.5596899358602 43.219 2 0.2763667993919706 0.00039635354736424893 0.0001652667199030729 ['ENSG00000176102|ENST00000323959|CSTF3'] 845 7206 ADDADEFGYSR True H1975_Epitope_Rep1 1244.4945600065598 1244.49346993586 32.73 2 0.2763491463618185 0.00039635354736424893 0.0001653336043688982 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 77396 13921 NSFVNDIFER True NCI_RA007_Epitope_Rep2 1239.5884008217497 1239.58730993586 58.805 2 0.2763191274397975 0.00039635354736424893 0.00016544740342764604 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 109766 8565 TEDQFIRTP True H1975_Epitope_Rep2 1105.54038800017 1105.53928993586 37.898 2 0.2762342619793429 0.00039635354736424893 0.00016576954526708294 ['ENSG00000062822|ENST00000440232|POLD1'] 139175 7854 YLEEIATQM[Oxidation]R True H1975_Epitope_Rep1 1268.60708804144 1268.6059899358602 35.162 2 0.2762138248167275 0.00039635354736424893 0.00016584721672811438 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 116285 13227 TTDLFGRDLSY True H1975_Epitope_Rep1 1286.6142812164198 1286.6131899358602 55.975 2 0.2762032132231783 0.00039635354736424893 0.00016588756047312592 ['ENSG00000169813|ENST00000682386|HNRNPF'] 106334 13299 STGIYEALELR True NCI_RA007_Epitope_Rep2 1250.65066672514 1250.6495699358602 56.367 2 0.2761748678190204 0.00039635354736424893 0.00016599537378988733 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 26380 14503 FHVEPGLQRL True PC9_epitope_Rep1 1194.6509415086598 1194.6493049037902 60.611 3 0.2761669243461627 0.00039635354736424893 0.00016602559981292362 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 15939 8633 EDLYLKPIQR True NCI_RA007_Epitope_Rep1 1273.70303665117 1273.70140490379 37.582 3 0.2761277130824929 0.00039635354736424893 0.00016617488490613245 ['ENSG00000167658|ENST00000309311|EEF2'] 92507 20183 RLYDGLFKVI True PC9_epitope_Rep2 1222.70739375562 1222.70575490379 83.049 3 0.2761276035459845 0.00039635354736424893 0.00016617530212163832 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 118045 11806 TYFEKNFNL True NCI_RA007_Epitope_Rep3 1174.56587447202 1174.56476993586 53.556 2 0.27610968792617124 0.00039635354736424893 0.0001662435553530977 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 58344 7881 LENDQIESLR True H1975_Epitope_Rep3 1215.60953018915 1215.6084299358602 35.292 2 0.2760823771117033 0.00039635354736424893 0.00016634765551985689 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF'] 89618 19078 QYQKVPVLF True PC9_epitope_Rep5 1120.6280808057597 1120.6269899358601 78.413 2 0.27600778583268876 0.00039635354736424893 0.0001666323065179456 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 118565 19246 TYQRWQFTL True PC9_epitope_Rep4 1241.61930702721 1241.61820993586 82.132 2 0.2760037066318027 0.00039635354736424893 0.00016664788738993423 ['ENSG00000174231|ENST00000304992|PRPF8'] 68018 11618 LTDIFQHDTY True H1975_Epitope_Rep3 1251.57716743171 1251.57606993586 49.82 2 0.27598568036218896 0.00039635354736424893 0.0001667167578043974 ['ENSG00000164366|ENST00000296824|CCDC127'] 48481 9751 KAFQQEISL True NCI_RA007_Epitope_Rep3 1062.57095985246 1062.5698699358602 45.423 2 0.2759844537913216 0.00039635354736424893 0.00016672144502533821 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF'] 142698 9231 YYQDTPKQI True PC9_epitope_Rep1 1154.5607890915799 1154.5596899358602 40.359 2 0.275944833239852 0.00039635354736424893 0.00016687292208890597 ['ENSG00000048162|ENST00000614830|NOP16'] 98413 11554 SFELFADKVPK True NCI_RA007_Epitope_Rep1 1279.68123857743 1279.68014993586 48.911 2 0.27594237439072167 0.00039635354736424893 0.0001668823272867781 ['ENSG00000196262|ENST00000468812|PPIA'] 140917 6282 YSEGYPGQRY True H1975_Epitope_Rep3 1218.53055159246 1218.5294499358602 29.17 2 0.275924028536534 0.00039635354736424893 0.00016695251768048474 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 54786 19416 KYNDTFWKEF True PC9_epitope_Rep5 1376.6401020414398 1376.63900993586 79.732 2 0.2758472969676292 0.00039635354736424893 0.00016724640964019727 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 14389 11044 DTDEYVLKY True H1975_Epitope_Rep1 1144.52882025696 1144.5277299358602 47.443 2 0.27584291460753574 0.00039635354736424893 0.00016726321028211598 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1'] 12955 16739 DLLEVADVLEK True H1975_Epitope_Rep3 1242.67073346338 1242.66962993586 69.913 2 0.2758366330319989 0.00039635354736424893 0.0001672872948882096 ['ENST00000509696.5_1_4:7062591-7066009:-|nuORF', 'ENSG00000109519|ENST00000264954|GRPEL1'] 77910 7017 NVIGLQM[Oxidation]GTNR True NCI_RA007_Epitope_Rep1 1217.61865578465 1217.61754993586 31.292 2 0.27580186496281756 0.00039635354736424893 0.00016742066426564614 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 55409 8371 LAEVEAALEK True H1975_Epitope_Rep3 1071.5811901829898 1071.58008993586 37.182 2 0.27579591623465644 0.00039635354736424893 0.00016744349409067062 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 139500 11331 YLSERYAELY True H1975_Epitope_Rep2 1305.62411762413 1305.6230299358601 48.633 2 0.2757541851290827 0.00039635354736424893 0.00016760373595471785 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 68288 9975 LTEGPHLYY True H1975_Epitope_Rep2 1091.52876068731 1091.52766993586 43.357 2 0.27572954784658366 0.00039635354736424893 0.00016769841190025957 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 133992 6833 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5281849037901 32.968 3 0.27570384509757745 0.00039635354736424893 0.00016779723928537344 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 61903 7330 LLDEHHISY True H1975_Epitope_Rep1 1125.54547338061 1125.54436993586 33.204 2 0.2756654743626161 0.00039635354736424893 0.00016794488375366511 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 44972 18161 IPALDNFLDKL True H1975_Epitope_Rep1 1257.69688864157 1257.6957899358601 75.668 2 0.275661456804088 0.00039635354736424893 0.00016796035019908114 ['ENSG00000167658|ENST00000309311|EEF2'] 37528 6565 GVVEVTHDLQK True NCI_RA007_Epitope_Rep1 1223.6510010783097 1223.64990993586 29.551 2 0.27564672841536486 0.00039635354736424893 0.00016801706246058205 ['ENSG00000149257|ENST00000358171|SERPINH1'] 141790 10123 YVDDASWM[Oxidation]RY True H1975_Epitope_Rep2 1320.54448778488 1320.5433899358602 43.936 2 0.27564339500272717 0.00039635354736424893 0.00016802990056250436 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 131018 6681 VTDQNKIVTY True H1975_Epitope_Rep2 1179.6135529404298 1179.61244993586 30.608 2 0.2756174737976833 0.00039635354736424893 0.0001681297654307807 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF'] 5838 13375 APFDLFENR True H1975_Epitope_Rep3 1107.53490869691 1107.53380993586 56.71 2 0.27557865395023545 0.00039635354736424893 0.0001682794351807136 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 39338 6511 HIYYITGETK True NCI_RA007_Epitope_Rep4 1223.6186383208699 1223.61754993586 31.65 2 0.2755503556884445 0.00039635354736424893 0.00016838862306834713 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 56624 10498 LDIDSPPITAR True NCI_RA007_Epitope_Rep1 1196.6401020414398 1196.63900993586 44.818 2 0.2755472412776572 0.00039635354736424893 0.00016840064424961424 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 118563 19950 TYQRWQFTL True PC9_epitope_Rep2 1241.61930702721 1241.61820993586 82.137 2 0.27553522080862713 0.00039635354736424893 0.0001684470496041795 ['ENSG00000174231|ENST00000304992|PRPF8'] 46299 4734 ISQEQM[Oxidation]QEFR True H1975_Epitope_Rep3 1310.59250060646 1310.5914099358602 23.335 2 0.27553334534161855 0.00039635354736424893 0.00016845429105129874 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 1522 5876 AEENIEVARAA True H1975_Epitope_Rep2 1171.5833154413099 1171.5822099358602 27.588 2 0.2754984779018575 0.00039635354736424893 0.0001685889760186057 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 25804 7192 FEYIEENKYSR True H1975_Epitope_Rep1 1476.68850878584 1476.6868649037901 32.685 3 0.275492320107701 0.00039635354736424893 0.00016861277337332 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'ENST00000366525.8_2_1:245025904-245026177:-|nuORF'] 11490 6330 DFHVDEQTTVK True H1975_Epitope_Rep1 1317.62009487285 1317.61843490379 29.412 3 0.27541765559210696 0.00039635354736424893 0.00016890158895933389 ['CON__P34955'] 57543 6897 LEDQVEM[Oxidation]LR True H1975_Epitope_Rep1 1147.55432419259 1147.5532299358601 31.569 2 0.2753938239947253 0.00039635354736424893 0.00016899387805055272 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH', 'ENST00000589990.1_1_19:11553236-11556289:+|nuORF'] 73996 9201 NDEELNKLLGK True NCI_RA007_Epitope_Rep3 1271.6721304457099 1271.6710299358601 43.286 2 0.2753599372571914 0.00039635354736424893 0.00016912519314219557 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 56186 14112 LAWLDEHTL True NCI_RA007_Epitope_Rep5 1096.55530978832 1096.5542099358602 60.972 2 0.2753595093894315 0.00039635354736424893 0.00016912685183306559 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF'] 24306 9939 EYVEKFYRI True NCI_RA007_Epitope_Rep4 1245.6393737654498 1245.63826993586 45.074 2 0.27535074786894664 0.00039635354736424893 0.00016916082070863076 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 22337 4645 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 22.966 2 0.2753426094208903 0.00039635354736424893 0.00016919238001967055 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 75856 15896 NLQEAEEWYK True PC9_epitope_Rep1 1308.59863115228 1308.5975299358602 65.954 2 0.275303200008731 0.00039635354736424893 0.00016934528543335588 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 142377 15197 YYEKLHTYF True PC9_epitope_Rep5 1262.5971746003 1262.5960699358602 63.462 2 0.27529922161831777 0.00039635354736424893 0.00016936072896173756 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 119661 5957 VAVEEVDEEGK True NCI_RA007_Epitope_Rep1 1202.5666623176596 1202.5655699358601 27.218 2 0.27528177574299484 0.00039635354736424893 0.0001694284679451285 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 140884 7652 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep3 1274.47613344154 1274.4750299358602 34.415 2 0.27527995763710644 0.00039635354736424893 0.00016943552886187005 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 40952 13210 HTDDPLTWDY True H1975_Epitope_Rep1 1261.52513185885 1261.5240299358602 55.909 2 0.27520161051122016 0.00039635354736424893 0.0001697400830542099 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 84324 7757 PYTKVEESF True NCI_RA007_Epitope_Rep3 1098.5233409536997 1098.5222499358601 37.634 2 0.27518098031383587 0.00039635354736424893 0.00016982036874311086 ['ENSG00000182858|ENST00000330817|ALG12'] 18653 6161 EKYIDQEELNK True NCI_RA007_Epitope_Rep1 1407.6881744326695 1407.68653490379 28.002 3 0.27517918531137475 0.00039635354736424893 0.00016982735607810946 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 32343 14625 GFGFVTFDDHD True NCI_RA007_Epitope_Rep4 1255.51456717515 1255.51346993586 63.654 2 0.27513899866748226 0.00039635354736424893 0.00016998386442551434 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 70771 13626 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.5542099358602 57.435 2 0.2751261248287516 0.00039635354736424893 0.00017003403259667962 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 14943 11000 DYETATLSDIK True NCI_RA007_Epitope_Rep1 1254.5979624459399 1254.59686993586 46.781 2 0.2751167852753027 0.00039635354736424893 0.00017007043726068722 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 24183 20867 EYQKVWNLF True PC9_epitope_Rep2 1225.6131590176099 1225.61206993586 85.71 2 0.2750474418526197 0.00039635354736424893 0.00017034097533177034 ['ENSG00000059378|ENST00000263549|PARP12'] 98039 9038 SEQLDLPVRQA True H1975_Epitope_Rep1 1254.65681473474 1254.6557099358602 39.671 2 0.2749701059490447 0.00039635354736424893 0.00017064320378025499 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 43076 20051 IEVIEIMTDR True PC9_epitope_Rep5 1217.63257413285 1217.6314699358602 82.18 2 0.27494944814606936 0.00039635354736424893 0.00017072402523429558 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 137065 11954 YAPELLYYANK True H1975_Epitope_Rep1 1343.6761531969898 1343.6750499358602 50.985 2 0.27493422423022607 0.00039635354736424893 0.00017078361171520348 ['CON__P02769'] 73797 18955 NAIDRLVNI True PC9_epitope_Rep2 1026.5821932425 1026.58108993586 78.275 2 0.27492636066118087 0.00039635354736424893 0.00017081439791864195 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 137683 5526 YEKEEDWRNAA True H1975_Epitope_Rep2 1409.62115750201 1409.61952490379 26.263 3 0.2749214084033291 0.00039635354736424893 0.0001708337890681222 ['COPS4|p.P331Lfs*8|1|0.35|ENSG00000138663|chr4:83066541-83066541|C/-|frameshift_variant', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENSG00000138663|ENST00000264389|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 70326 10739 LVSESSDVLPK True PC9_epitope_Rep2 1172.6288686514001 1172.6277699358602 46.626 2 0.2749200020947502 0.00039635354736424893 0.00017083929603700293 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 67981 5617 LTDEQYQAVR True H1975_Epitope_Rep3 1221.59896550545 1221.5978699358602 26.642 2 0.2749066907390312 0.00039635354736424893 0.0001708914308284891 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 74541 5742 NFSDNQLQEGK True H1975_Epitope_Rep3 1278.5840437173 1278.5829499358601 27.112 2 0.27489038059375753 0.00039635354736424893 0.00017095533229385956 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 133092 8191 VVQELQQAISK True H1975_Epitope_Rep1 1241.6979512707296 1241.6968499358602 36.447 2 0.27488689232501157 0.00039635354736424893 0.00017096900207619098 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 107274 20636 SVLDDNKLLTL True PC9_epitope_Rep2 1229.68671788069 1229.68562993586 84.811 2 0.27487648258960934 0.00039635354736424893 0.00017100980211936563 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 46658 9373 ITDPDPDIRY True H1975_Epitope_Rep1 1203.57716743171 1203.57606993586 40.962 2 0.2748703177814843 0.00039635354736424893 0.00017103396913951984 ['ENSG00000198793|ENST00000361445|MTOR'] 30192 21119 FYQRFPLSF True PC9_epitope_Rep1 1203.6076797143498 1203.60658993586 86.064 2 0.27482987486354654 0.00039635354736424893 0.00017119259658651443 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 56622 10121 LDIDSPPITAR True H1975_Epitope_Rep3 1196.6401020414398 1196.63900993586 43.974 2 0.2747852058574097 0.00039635354736424893 0.00017136797104858853 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 14381 8627 DTDAQQAFKY True H1975_Epitope_Rep2 1185.5302172392899 1185.52912993586 38.14 2 0.2747740926433397 0.00039635354736424893 0.00017141163044721492 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 4501 5181 AIYKTPPGIQK True NCI_RA007_Epitope_Rep3 1214.7023083751799 1214.70067490379 27.371 3 0.27476697981718046 0.00039635354736424893 0.00017143957975806158 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'nc|ENSG00000183337|Q6W2J9-3|BCOR', 'ENST00000490976.5_1_X:39931586-39937182:-|nuORF'] 133849 20039 VYGNERFIQYL True PC9_epitope_Rep2 1400.7088503075997 1400.7077499358602 82.483 2 0.27473802492986704 0.00039635354736424893 0.0001715534028980462 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 54950 13088 KYQDILNEI True NCI_RA007_Epitope_Rep4 1134.5920892198599 1134.59098993586 57.443 2 0.27473677194936846 0.00039635354736424893 0.00017155833013611787 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 48958 8635 KEELTLEGIR True NCI_RA007_Epitope_Rep1 1186.65575210558 1186.65409490379 37.59 3 0.274711189443608 0.00039635354736424893 0.0001716589621290942 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 41191 6862 HVIETLIGK True NCI_RA007_Epitope_Rep3 1008.5967806774798 1008.59568993586 34.101 2 0.2746688316476101 0.00039635354736424893 0.00017182571179914435 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 54198 5767 KVVEGSFVYK True NCI_RA007_Epitope_Rep3 1154.6335601090198 1154.63191490379 29.666 3 0.27466379736636093 0.00039635354736424893 0.00017184554100385478 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 22338 4445 ETDPDAQAKAY True H1975_Epitope_Rep3 1207.5356965425499 1207.5345899358601 22.22 2 0.27466147332304064 0.00039635354736424893 0.00017185469580079508 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 89610 21731 QYPVYWDHLEF True PC9_epitope_Rep1 1495.67721582615 1495.67610993586 88.419 2 0.2746569953734666 0.00039635354736424893 0.00017187233657325518 ['ENSG00000090487|ENST00000204566|SPG21'] 27666 9749 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 42.429 2 0.2745975359194317 0.00039635354736424893 0.00017210674759404813 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 116655 15650 TVATENEVFRV True PC9_epitope_Rep5 1263.64591569787 1263.6448099358602 65.209 2 0.2745089607559188 0.00039635354736424893 0.00017245653723772791 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16'] 42563 11574 IEFASFEDAK True NCI_RA007_Epitope_Rep2 1155.5448046742697 1155.54370993586 49.61 2 0.2745071002941262 0.00039635354736424893 0.00017246389196234885 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 14184 5983 DSDSMEDTGHY True H1975_Epitope_Rep3 1255.42991114467 1255.42880993586 28.025 2 0.27447382428964984 0.00039635354736424893 0.0001725954907759016 ['ENSG00000132716|ENST00000368074|DCAF8', 'nc|ENSG00000132716|Q5TAQ9-2|DCAF8'] 140751 12959 YSDDNPYYNYY True H1975_Epitope_Rep1 1475.55174052951 1475.55064993586 54.922 2 0.27443002144970774 0.00039635354736424893 0.00017276887407265793 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 9850 19691 AYLESFYKF True PC9_epitope_Rep4 1166.5648118428599 1166.56370993586 83.862 2 0.27439932321162563 0.00039635354736424893 0.0001728904898055863 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 40954 13270 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.5240299358602 56.172 2 0.2743444223656374 0.00039635354736424893 0.00017310820163039215 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 130818 6722 VTAQVVGTERY True H1975_Epitope_Rep1 1221.6353510141698 1221.63424993586 30.899 2 0.27432074906885934 0.00039635354736424893 0.00017320216386516746 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF'] 142633 18536 YYNPHLLLNTL True PC9_epitope_Rep6 1359.7186867153098 1359.7175899358601 83.942 2 0.27425769584117266 0.00039635354736424893 0.0001734526791464822 ['ENSG00000205339|ENST00000379719|IPO7'] 137378 10277 YDSYLGDDYVR True H1975_Epitope_Rep3 1364.5884603913998 1364.5873699358601 44.582 2 0.2742495880500859 0.00039635354736424893 0.00017348491833503525 ['CON__Q29443', 'CON__Q0IIK2'] 26459 12549 FIDHDITSQLY True H1975_Epitope_Rep2 1350.6455813447 1350.64448993586 53.364 2 0.2742429661651994 0.00039635354736424893 0.00017351125353357738 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 118536 8002 TYQEVAQKF True NCI_RA007_Epitope_Rep4 1112.5502244078798 1112.54912993586 37.547 2 0.2741897255624905 0.00039635354736424893 0.00017372313664196657 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 31360 7109 [Acetylation]-GDREQLLQR True NCI_RA007_Epitope_Rep1 1155.5996345280898 1155.5985299358601 31.643 2 0.27414639364929827 0.00039635354736424893 0.00017389577710027204 ['ENSG00000128245|ENST00000248975|YWHAH'] 39736 11290 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7072149037901 51.205 3 0.2741313461821452 0.00039635354736424893 0.00017395576851298502 ['CON__P02769'] 54188 4261 KVVDSLYNK True NCI_RA007_Epitope_Rep3 1064.5866099165999 1064.58550993586 23.457 2 0.274105123798971 0.00039635354736424893 0.00017406036173791235 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 70318 7802 LVSESSDVLPK True NCI_RA007_Epitope_Rep4 1172.6288686514001 1172.6277699358602 36.695 2 0.2740813930872755 0.00039635354736424893 0.00017415507071429824 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 78474 15610 NYNEKIYEL True PC9_epitope_Rep1 1184.5713537752797 1184.5702499358601 64.865 2 0.27407574742822677 0.00039635354736424893 0.000174177610067295 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 113796 8862 TNAENEFVTIK True NCI_RA007_Epitope_Rep5 1264.6299312805597 1264.62882993586 40.753 2 0.2740388427873325 0.00039635354736424893 0.00017432501767000773 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 116323 17220 TTEFLYNLY True H1975_Epitope_Rep2 1162.5546410819798 1162.55354993586 71.527 2 0.2740362011415577 0.00039635354736424893 0.00017433557394229087 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF', 'ENST00000474114.5_1_21:45744937-45745285:+|nuORF', 'ENST00000495274.1_1_21:45742848-45745285:+|nuORF'] 77363 7691 NSELLNDRY True H1975_Epitope_Rep2 1122.53055159246 1122.5294499358602 34.535 2 0.27400237747833783 0.00039635354736424893 0.00017447079315821982 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14'] 15974 7268 EDQTEYLEER True NCI_RA007_Epitope_Rep2 1310.5626395663799 1310.56154993586 32.892 2 0.2739701645780018 0.00039635354736424893 0.0001745996705550902 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 72680 5569 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 26.462 2 0.2739353071313197 0.00039635354736424893 0.0001747392356480678 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 43213 19450 IFIQNSKLYF True PC9_epitope_Rep4 1271.69140933831 1271.6903099358601 82.93 2 0.27391534306992305 0.00039635354736424893 0.00017481921969655627 ['SLC35A5|p.Y300Mfs*8|1|0.19|ENSG00000138459|chr3:112581009-112581009|T/-|frameshift_variant', 'ENSG00000138459|ENST00000492406|SLC35A5'] 72686 3801 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 19.71 2 0.2738997173250992 0.00039635354736424893 0.00017488184828289786 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 107279 18775 SVLDDNKLLTL True PC9_epitope_Rep6 1229.68671788069 1229.68562993586 84.858 2 0.2738433705335269 0.00039635354736424893 0.00017510787503665926 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 67939 11082 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 47.591 2 0.2738417657262174 0.00039635354736424893 0.00017511431676460256 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 118600 16500 TYRNVMEQF True PC9_epitope_Rep3 1186.54409348162 1186.54298993586 68.604 2 0.2738375005818225 0.00039635354736424893 0.00017513143829112453 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 131797 5207 VTQFEATDAR True H1975_Epitope_Rep3 1136.5462016565998 1136.5451099358602 25.12 2 0.27378632660967805 0.00039635354736424893 0.0001753369962207535 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000274487|A6NEC2|NPEPPSL1'] 22314 13227 ETDLLDIRSEY True H1975_Epitope_Rep3 1352.64597526752 1352.64486993586 56.133 2 0.27373211247756923 0.00039635354736424893 0.0001755550295719125 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 46685 8579 ITDSAGHILYS True H1975_Epitope_Rep2 1175.58225281215 1175.5811499358601 37.952 2 0.2737272860746504 0.00039635354736424893 0.00017557445310625763 ['ENSG00000170348|ENST00000303575|TMED10'] 34492 11425 GPLQSVQVFGR True NCI_RA007_Epitope_Rep5 1186.6458561282197 1186.64474993586 50.596 2 0.2736995166586226 0.00039635354736424893 0.0001756862510749838 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 54213 6675 KVVNPLFEK True NCI_RA007_Epitope_Rep5 1072.6280808057597 1072.6269899358601 32.344 2 0.27369768669663425 0.00039635354736424893 0.00017569362089305945 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 88545 11384 QTDADFYQQY True H1975_Epitope_Rep2 1277.52004647841 1277.51894993586 48.839 2 0.27366073877065217 0.00039635354736424893 0.00017584248776674865 ['nc|ENSG00000116809|Q13105-3|ZBTB17', 'ENSG00000116809|ENST00000375743|ZBTB17', 'nc|ENSG00000116809|Q13105-2|ZBTB17'] 27482 6660 FM[Oxidation]EKETPLRY True H1975_Epitope_Rep2 1328.6434735501598 1328.6418149037902 30.526 3 0.27365533902620254 0.00039635354736424893 0.00017586425445125488 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 45975 13087 ISESIKELQFY True H1975_Epitope_Rep1 1355.6972825643898 1355.69618993586 55.428 2 0.27365426643486 0.00039635354736424893 0.00017586857845065115 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 131165 14079 VTEITDDLHFY True H1975_Epitope_Rep1 1351.6295969273901 1351.6284899358602 59.321 2 0.2735823882800556 0.00039635354736424893 0.00017615858775843092 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 136774 16407 WYQTKFETL True PC9_epitope_Rep6 1214.5971746002997 1214.5960699358602 75.502 2 0.27356708720688405 0.00039635354736424893 0.00017622038533105595 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 65937 5646 LSDSGVTQRY True H1975_Epitope_Rep3 1124.5462016566 1124.5451099358602 26.748 2 0.2735511515727921 0.00039635354736424893 0.00017628476883033942 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF'] 133783 12194 VYEYVVERF True NCI_RA007_Epitope_Rep5 1202.5971746002995 1202.5960699358602 53.558 2 0.2735079453793127 0.00039635354736424893 0.00017645944998343619 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 47322 14165 IVENIQVFDFK True H1975_Epitope_Rep3 1350.7183523621395 1350.71724993586 59.818 2 0.27350226332690186 0.00039635354736424893 0.00017648243521865316 ['nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000198074|ENST00000359579|AKR1B10', 'ENSG00000227471|ENST00000457545|AKR1B15'] 105716 8822 SSEVIKDANLY True H1975_Epitope_Rep1 1237.6190322436898 1237.61792993586 38.855 2 0.27346688490194754 0.00039635354736424893 0.00017662561671454559 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 32253 19873 GFAFVQYVNER True PC9_epitope_Rep1 1328.65133543148 1328.6502299358601 81.259 2 0.27346564740049534 0.00039635354736424893 0.00017663062716329934 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant'] 94777 4353 RSMEAHNILSK True NCI_RA007_Epitope_Rep4 1284.66085456936 1284.65920490379 23.089 3 0.27345228618970796 0.00039635354736424893 0.00017668473366987415 ['nc|ENSG00000160075|Q9NP77-2|SSU72', 'ENST00000378725.3_1_1:1480120-1509937:-|nuORF', 'ENSG00000160075|ENST00000291386|SSU72'] 46042 14117 ISGLIYEETR True PC9_epitope_Rep5 1179.6135529404298 1179.61244993586 59.312 2 0.273449222009898 0.00039635354736424893 0.00017669714447050424 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 75608 7555 NLDQATRVAY True H1975_Epitope_Rep1 1149.5778361380499 1149.5767299358602 34.052 2 0.2734467763619858 0.00039635354736424893 0.00017670705066729196 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 108564 21663 SYNNFFRMF True PC9_epitope_Rep5 1224.53861417836 1224.53750993586 88.374 2 0.2734416034101031 0.00039635354736424893 0.000176728005752556 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 57585 9360 LEDVRNGIYP True H1975_Epitope_Rep3 1174.59823722946 1174.5971499358602 41.003 2 0.2734330457094035 0.00039635354736424893 0.00017676267756383554 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2', 'ENST00000486701.1_1_2:27663393-27664286:+|nuORF', 'nc|ENSG00000185189|Q9NSY0-2|NRBP2', 'ENST00000423469.6_1_8:144917834-144920143:-|nuORF', 'nc|ENSG00000185189|Q9NSY0-4|NRBP2', 'ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 40951 13116 HTDDPLTWDY True H1975_Epitope_Rep1 1261.52513185885 1261.5240299358602 55.542 2 0.27341781762665957 0.00039635354736424893 0.00017682439149772626 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 118537 8009 TYQEVAQKF True NCI_RA007_Epitope_Rep5 1112.5502244078798 1112.54912993586 37.499 2 0.2734138168761393 0.00039635354736424893 0.00017684060867712608 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 24888 18415 FAYDGKDYLTL True PC9_epitope_Rep6 1304.6288686513997 1304.6277699358602 83.479 2 0.273317164058269 0.00039635354736424893 0.00017723284714879674 ['ENSG00000204592|ENST00000376630|HLA-E'] 48921 13141 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69070993586 55.67 2 0.273284968396193 0.00039635354736424893 0.00017736369759953238 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 44373 6536 ILEQEEYQR True NCI_RA007_Epitope_Rep1 1206.5880664685799 1206.58696993586 29.437 2 0.2732432228446567 0.00039635354736424893 0.00017753350501455812 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 22981 5597 EVEVEVESM[Oxidation]DK True H1975_Epitope_Rep1 1308.5755131296398 1308.57440993586 26.596 2 0.27314877198265963 0.00039635354736424893 0.00017791830172406048 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 91276 13825 RGLDDIKDLKV True PC9_epitope_Rep2 1270.7245003717399 1270.72285490379 58.462 3 0.27314200578062603 0.00039635354736424893 0.0001779458995484198 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF'] 54190 4860 KVVDSLYNK True NCI_RA007_Epitope_Rep4 1064.5866099165999 1064.58550993586 25.141 2 0.2731148844099565 0.00039635354736424893 0.00017805656458933473 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 106130 8064 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58082993586 35.967 2 0.2731129371728271 0.00039635354736424893 0.0001780645126752178 ['ENSG00000168090|ENST00000303904|COPS6'] 39720 8381 HLVDEPQNLIK True H1975_Epitope_Rep3 1304.7088503076 1304.7077499358602 37.221 2 0.27304964910425006 0.00039635354736424893 0.00017832303066855098 ['CON__P02769'] 21052 9381 EQVANSAFVER True PC9_epitope_Rep1 1248.6098645423197 1248.6087699358602 40.942 2 0.27302333179692073 0.00039635354736424893 0.00017843064175672124 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 113821 9164 TNEGVIEFR True NCI_RA007_Epitope_Rep1 1063.52982331647 1063.5287299358602 39.647 2 0.27301613241170125 0.00039635354736424893 0.00017846009126533646 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6'] 135183 5218 WEQQEPGERKL True H1975_Epitope_Rep3 1398.6891774921799 1398.68808993586 25.157 2 0.27296955932866995 0.00039635354736424893 0.00017865071882902764 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 54493 19661 KYIDFDHVF True PC9_epitope_Rep5 1182.57095985246 1182.5693249037902 80.683 3 0.2729552934592775 0.00039635354736424893 0.00017870915102507533 ['ENSG00000007545|ENST00000397412|CRAMP1'] 74874 7125 NHHLQETSF True PC9_epitope_Rep1 1111.50467119779 1111.50356993586 32.216 2 0.2729284192821389 0.00039635354736424893 0.00017881927813036285 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 44372 5904 ILEQEEYQR True H1975_Epitope_Rep3 1206.5880664685799 1206.58696993586 27.72 2 0.2729273631110533 0.00039635354736424893 0.00017882360757853557 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 134313 15468 VYNSEYYHF True PC9_epitope_Rep2 1220.5138388991602 1220.51274993586 64.774 2 0.27292167468115436 0.00039635354736424893 0.00017884692735070976 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 136770 17468 WYQTKFETL True PC9_epitope_Rep4 1214.5971746002997 1214.5960699358602 75.187 2 0.2729094530340753 0.00039635354736424893 0.00017889704040955116 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 138063 14520 YGEPGEVFINK True PC9_epitope_Rep5 1251.6135529404298 1251.61244993586 60.85 2 0.27287628583151585 0.00039635354736424893 0.00017903310849847964 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 62010 10598 LLDPTQKALY True H1975_Epitope_Rep2 1160.64412479272 1160.64302993586 45.788 2 0.27287577315263617 0.00039635354736424893 0.0001790352125712179 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A', 'ZNF75A|p.E158Sfs*50|1|0.1|ENSG00000162086|chr16:3317446-3317449|AAGA/-|frameshift_variant'] 80634 5264 PGSEETQTLVR True H1975_Epitope_Rep3 1215.6095301891498 1215.6084299358602 25.33 2 0.2728661199093895 0.00039635354736424893 0.00017907483483180705 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 134513 16356 VYQLRFQFL True NCI_RA007_Epitope_Rep4 1212.6655289436396 1212.6644299358602 70.914 2 0.2728188270383364 0.00039635354736424893 0.00017926907791936608 ['ENSG00000068654|ENST00000263857|POLR1A'] 120067 10477 VDTFLEDVK True H1975_Epitope_Rep1 1064.5389910178399 1064.5378899358602 45.255 2 0.2728130004687479 0.00039635354736424893 0.0001792930236231879 ['CON__P34955'] 109706 12559 TEDGDSFLHLA True H1975_Epitope_Rep3 1203.54078192299 1203.53968993586 53.508 2 0.27280031337644645 0.00039635354736424893 0.00017934517539395354 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 46657 9188 ITDPDPDIRY True H1975_Epitope_Rep1 1203.57716743171 1203.57606993586 40.248 2 0.27278289701949765 0.00039635354736424893 0.00017941679210001495 ['ENSG00000198793|ENST00000361445|MTOR'] 72667 5607 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 26.569 2 0.2727614147945187 0.00039635354736424893 0.0001795051672563476 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 73226 14346 MSDPYMPSYY True H1975_Epitope_Rep2 1252.4780476374 1252.4769499358601 60.331 2 0.2727603064963189 0.00039635354736424893 0.00017950972783731904 ['ENSG00000185728|ENST00000539294|YTHDF3'] 128020 12188 VPIYEGYALPH True H1975_Epitope_Rep3 1257.63937376545 1257.63826993586 52.053 2 0.27274978063563726 0.00039635354736424893 0.00017955304691062525 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 47907 11941 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6589499358602 53.72 2 0.2727455457063937 0.00039635354736424893 0.00017957047867230838 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 120648 6146 VEILANDQGNR True NCI_RA007_Epitope_Rep2 1227.6207635791898 1227.6196699358602 28.515 2 0.27272354163312695 0.00039635354736424893 0.00017966107884152867 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 65762 11898 LSDDRSNILIY True H1975_Epitope_Rep2 1307.67213044571 1307.6710299358601 50.845 2 0.2726926061636256 0.00039635354736424893 0.00017978853080939541 ['nc|ENSG00000142892|Q92643-2|PIGK', 'ENSG00000142892|ENST00000370812|PIGK'] 52682 16111 KLVILEGELER True PC9_epitope_Rep5 1297.7605515272899 1297.7589149037901 66.961 3 0.2726819866706403 0.00039635354736424893 0.00017983230324972085 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 7540 12566 ASEAEMRLFY True H1975_Epitope_Rep2 1215.55940919259 1215.55830993586 53.429 2 0.27265920866346677 0.00039635354736424893 0.00017992622781482005 ['ENSG00000150990|ENST00000308736|DHX37'] 131643 4991 VTLTSEEEAR True NCI_RA007_Epitope_Rep3 1133.5564319871298 1133.55532993586 26.631 2 0.2726471347653181 0.00039635354736424893 0.00017997603416398977 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 44840 10498 INEILSNALK True H1975_Epitope_Rep3 1113.63937376545 1113.63826993586 45.443 2 0.27260939485343727 0.00039635354736424893 0.00018013180509575521 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 49892 20888 KIIDEDGLLNL True PC9_epitope_Rep1 1241.68671788069 1241.68562993586 85.166 2 0.27257430860791704 0.00039635354736424893 0.00018027674416657677 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 130987 6677 VTDPEKLNNY True H1975_Epitope_Rep2 1191.57716743171 1191.57606993586 30.592 2 0.27257270708061304 0.00039635354736424893 0.0001802833627614768 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'DOT1L|p.D1250Efs*47|1|0.2|ENSG00000104885|chr19:2226271-2226293|CATCGGCCTGGCCAAGTCGGCGG/-|frameshift_variant', 'ENSG00000104885|ENST00000398665|DOT1L', 'DOT1L|p.N522Tfs*35|1|0.31|ENSG00000104885|chr19:2213545-2213545|A/-|frameshift_variant'] 10994 11568 DALNIETAIK True NCI_RA007_Epitope_Rep1 1086.5920892198599 1086.59098993586 48.966 2 0.27253032631182617 0.00039635354736424893 0.0001804585972377034 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 2537 6863 AEQPTRYETL True H1975_Epitope_Rep2 1206.5880664685799 1206.58696993586 31.318 2 0.27251580342428955 0.00039635354736424893 0.0001805186851827253 ['SLC25A24|p.I172Mfs*3|1|0.53|ENSG00000085491|chr1:108157615-108157615|A/-|frameshift_variant', 'ENSG00000085491|ENST00000565488|SLC25A24'] 134222 20003 VYMDWYEKF True PC9_epitope_Rep4 1279.5583465634297 1279.55724993586 85.074 2 0.2725016665336106 0.00039635354736424893 0.0001805771953241563 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 10130 8779 AYVHMVTHF True NCI_RA007_Epitope_Rep5 1103.52223583823 1103.52112993586 40.436 2 0.2724980366201032 0.00039635354736424893 0.00018059222197143422 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 71862 16275 MELQEIQLK True PC9_epitope_Rep1 1130.6005457285798 1130.59944993586 67.422 2 0.2724960983255498 0.00039635354736424893 0.00018060024638583453 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 78101 5537 NVYYNEATGGK True H1975_Epitope_Rep3 1214.5567663402996 1214.5556699358601 26.346 2 0.2724569015233607 0.00039635354736424893 0.0001807625952621477 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF'] 95903 19647 RYLDWIKKI True PC9_epitope_Rep1 1233.7233781729299 1233.7217249037901 80.397 3 0.27245008061849774 0.00039635354736424893 0.00018079086163154423 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 22308 13245 ETDLLDIRSEY True H1975_Epitope_Rep1 1352.64597526752 1352.64486993586 56.043 2 0.27244343222611656 0.00039635354736424893 0.00018081841735559655 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 120836 7905 VELQELNDR True NCI_RA007_Epitope_Rep2 1114.5618517207397 1114.56074993586 35.382 2 0.2724123666762158 0.00039635354736424893 0.0001809472311123371 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 134223 20989 VYMDWYEKF True PC9_epitope_Rep5 1279.5583465634297 1279.55724993586 85.796 2 0.27240654981977114 0.00039635354736424893 0.00018097136100558487 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 1504 13091 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52256993586 55.443 2 0.2724065276385335 0.00039635354736424893 0.000180971453025523 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 14013 17804 DRFFSEYEKL True PC9_epitope_Rep2 1332.6350166609998 1332.6333749037901 73.776 3 0.27236604644511464 0.00039635354736424893 0.00018113946931909994 ['ENSG00000135932|ENST00000258418|CAB39'] 82946 4507 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 22.456 3 0.27233280428737233 0.00039635354736424893 0.0001812775569613235 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 134309 10741 VYNSEYYHF True NCI_RA007_Epitope_Rep5 1220.5138388991602 1220.51274993586 47.952 2 0.2723042543676228 0.00039635354736424893 0.00018139623723526172 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 14014 17066 DRFFSEYEKL True PC9_epitope_Rep4 1332.6350166609998 1332.6333749037901 73.643 3 0.2722474200946026 0.00039635354736424893 0.00018163272552191114 ['ENSG00000135932|ENST00000258418|CAB39'] 70056 17643 LVNELTEFAK True PC9_epitope_Rep3 1162.6233893481399 1162.6222899358602 73.056 2 0.2721255435049818 0.00039635354736424893 0.00018214089741221126 ['CON__P02769'] 49208 5265 KEMQPTHPIRL True H1975_Epitope_Rep3 1348.7285402063599 1348.72690490379 25.334 3 0.2720858063500385 0.00039635354736424893 0.0001823068915188243 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion'] 133772 9492 VYERELQTF True NCI_RA007_Epitope_Rep5 1183.5873381925899 1183.58624993586 43.143 2 0.27206776969469126 0.00039635354736424893 0.00018238228606150378 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 8033 4681 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 23.102 2 0.27206483213628757 0.00039635354736424893 0.0001823945682278033 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 14142 9499 DSDINNRLVY True H1975_Epitope_Rep3 1207.58331544131 1207.5822099358602 41.543 2 0.27198507407425604 0.00039635354736424893 0.0001827283598079271 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'ELP5|p.R263Kfs*6|1|0.25|ENSG00000170291|chr17:7258873-7258876|AGAG/-|frameshift_variant', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5', 'nc|ENSG00000170291|Q8TE02-3|ELP5'] 134510 15066 VYQHLFTRI True PC9_epitope_Rep5 1175.6451278522297 1175.64349490379 62.958 3 0.27196849456203065 0.00039635354736424893 0.00018279782268166444 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 62118 9582 LLEELEEGQK True NCI_RA007_Epitope_Rep1 1186.60813320682 1186.60702993586 41.271 2 0.27184092904638435 0.00039635354736424893 0.00018333316681523883 ['ENSG00000169139|ENST00000523111|UBE2V2', 'ENST00000470565.5_1_20:48713044-48729665:-|nuORF', 'ENST00000490289.5_1_20:48711880-48729665:-|nuORF', 'nc|ENSG00000244687|Q13404-8|UBE2V1', 'nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF'] 34177 17574 GNFNYVEFTR True PC9_epitope_Rep3 1245.5778361380499 1245.5767299358602 72.787 2 0.2718380326903986 0.00039635354736424893 0.00018334533993627443 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 68432 5058 LTEVNKAGTQY True H1975_Epitope_Rep2 1222.61936659686 1222.61826993586 24.537 2 0.2718374091347078 0.00039635354736424893 0.00018334796079007962 ['ENSG00000170542|ENST00000380698|SERPINB9'] 54746 11351 KYMEDYHQF True PC9_epitope_Rep5 1259.52810906431 1259.5270099358602 48.658 2 0.27183512178650693 0.00039635354736424893 0.00018335757501643403 ['ENSG00000118898|ENST00000345988|PPL'] 141301 7250 YTDQFSRNY True H1975_Epitope_Rep2 1192.51490152832 1192.51380993586 32.821 2 0.2718313679716111 0.00039635354736424893 0.0001833733542182839 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 68309 12606 LTEKELLLY True H1975_Epitope_Rep3 1120.63797678312 1120.6368699358602 53.694 2 0.2717898176527369 0.00039635354736424893 0.0001835481022986698 ['ENSG00000101400|ENST00000217381|SNTA1'] 28461 12099 FSDNDKLYLY True H1975_Epitope_Rep2 1276.59756852312 1276.5964699358601 51.622 2 0.27177712083630795 0.00039635354736424893 0.00018360153453123834 ['RFX5|p.L207*|1|0.1|ENSG00000143390|chr1:151343819-151343819|G/-|frameshift_variant', 'RFX5|p.R468Afs*98|1|0.13|ENSG00000143390|chr1:151342636-151342636|C/-|frameshift_variant', 'ENSG00000143390|ENST00000452671|RFX5', 'ENST00000479681.5_1_1:151317580-151318796:-|nuORF', 'nc|ENSG00000143390|P48382-2|RFX5'] 104363 14873 SQITAIEAQHL True PC9_epitope_Rep5 1209.63535101417 1209.63424993586 62.211 2 0.2717270113178917 0.00039635354736424893 0.00018381256338781063 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 136775 16488 WYQTKFETL True PC9_epitope_Rep6 1214.5971746002997 1214.5960699358602 75.846 2 0.2717256803270696 0.00039635354736424893 0.00018381817197021724 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 75610 7730 NLDQATRVAY True H1975_Epitope_Rep2 1149.5778361380499 1149.5767299358602 34.686 2 0.271705747423649 0.00039635354736424893 0.00018390218654238454 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 120291 12242 VEDLSSYLHTA True H1975_Epitope_Rep2 1233.58773211541 1233.5866299358602 52.171 2 0.27170309674813004 0.00039635354736424893 0.00018391336168848066 ['ENSG00000065618|ENST00000648076|COL17A1'] 21944 10385 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4818899358602 44.957 2 0.2716610295029879 0.00039635354736424893 0.00018409080664885164 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 90888 4567 REWEEAERQA True NCI_RA007_Epitope_Rep4 1302.59527710734 1302.59362490379 23.968 3 0.271621625504898 0.00039635354736424893 0.00018425717321555354 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 54745 11336 KYMEDYHQF True PC9_epitope_Rep5 1259.52810906431 1259.5264649037902 48.6 3 0.2716133391988494 0.00039635354736424893 0.00018429217776385918 ['ENSG00000118898|ENST00000345988|PPL'] 82070 10032 PM[Oxidation]FIVNTNVPR True H1975_Epitope_Rep3 1302.6754423847801 1302.6743499358602 43.623 2 0.2715987532654456 0.00039635354736424893 0.00018435381054489065 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 23574 10637 EVYELLDSPGK True H1975_Epitope_Rep3 1248.6237832709596 1248.62268993586 45.988 2 0.271595689362383 0.00039635354736424893 0.00018436675967366356 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 22429 6766 ETEREYFNRY True H1975_Epitope_Rep3 1405.6262428824498 1405.62460490379 30.98 3 0.27156891106009345 0.00039635354736424893 0.0001844799729484728 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 115795 9510 TSDHFETIMKY True H1975_Epitope_Rep2 1370.6176523446998 1370.61601490379 41.549 3 0.27156603408999064 0.00039635354736424893 0.00018449214034049256 ['ENSG00000136628|ENST00000366923|EPRS1'] 27483 8013 FMEKETPLRY True H1975_Epitope_Rep1 1312.6485585501598 1312.64692490379 35.766 3 0.2715448778609014 0.00039635354736424893 0.0001845816397632701 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 16657 9352 EEQLQQIRAE True PC9_epitope_Rep3 1242.6204292260197 1242.6193299358602 40.91 2 0.27153667050636676 0.00039635354736424893 0.00018461637190427536 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 7178 5652 AQYEEIAQRS True NCI_RA007_Epitope_Rep5 1193.5676653771698 1193.5665699358601 28.428 2 0.2715270619209812 0.00039635354736424893 0.00018465704213504135 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 42466 10266 IEEDIRDLAA True H1975_Epitope_Rep3 1143.57716743171 1143.57606993586 44.539 2 0.2715250490522445 0.00039635354736424893 0.00018466556313523634 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 14320 7239 DSYSSSRSDLY True H1975_Epitope_Rep2 1278.5364248185401 1278.53532993586 32.779 2 0.27146166514927433 0.00039635354736424893 0.00018493408532059517 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 137963 14759 YFINRSWEW True NCI_RA007_Epitope_Rep3 1299.6036569630699 1299.60254993586 65.468 2 0.27146127809758536 0.00039635354736424893 0.00018493572624303698 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 74912 17119 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69646993586 71.001 2 0.2714495208597845 0.00039635354736424893 0.00018498557851285717 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 95881 7624 RYLDKTEQW True NCI_RA007_Epitope_Rep1 1237.6091362663299 1237.60802993586 33.649 2 0.2714419491883526 0.00039635354736424893 0.00018501769054267864 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 106207 12845 STDVSDLLHQY True H1975_Epitope_Rep3 1276.5935457718401 1276.59244993586 54.63 2 0.27143505775566323 0.00039635354736424893 0.00018504692248166272 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 9847 20765 AYLESFYKF True PC9_epitope_Rep1 1166.5648118428599 1166.56370993586 84.7 2 0.27140003835635723 0.00039635354736424893 0.00018519553854614426 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 115897 11755 TSETPDYLLKY True H1975_Epitope_Rep3 1328.6499980188 1328.64890993586 50.359 2 0.27137881853344625 0.00039635354736424893 0.0001852856498337541 ['ENSG00000105656|ENST00000262809|ELL'] 8112 8708 ATEDPWKTNY True H1975_Epitope_Rep2 1223.54586730343 1223.5447699358601 38.456 2 0.27132587554545146 0.00039635354736424893 0.00018551066700175898 ['ENSG00000139684|ENST00000378720|ESD'] 142353 8000 YYEHVKARF True PC9_epitope_Rep1 1211.60874234351 1211.60710490379 35.593 3 0.2712996822784416 0.00039635354736424893 0.00018562209424758202 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 9841 15124 AYLESFYKF True NCI_RA007_Epitope_Rep1 1166.5648118428599 1166.56370993586 62.898 2 0.2712957346458895 0.00039635354736424893 0.0001856388934518658 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 134687 10026 VYTGIDHHW True PC9_epitope_Rep2 1126.51959298594 1126.51795490379 43.891 3 0.271288508678811 0.00039635354736424893 0.00018566964759815063 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 108516 16732 SYMLVNENRF True PC9_epitope_Rep2 1271.5968573304701 1271.59576993586 69.607 2 0.2712452607347645 0.00039635354736424893 0.00018585382011536859 ['ENSG00000182195|ENST00000370526|LDOC1'] 142697 9140 YYQDTPKQI True PC9_epitope_Rep1 1154.5607890915799 1154.5596899358602 40.007 2 0.2711815204352799 0.00039635354736424893 0.00018612559347360697 ['ENSG00000048162|ENST00000614830|NOP16'] 4820 6965 ALEEPDDQNRI True NCI_RA007_Epitope_Rep5 1298.6102584651396 1298.60916993586 33.475 2 0.27114514382449156 0.00039635354736424893 0.00018628087297771796 ['nc|ENSG00000072694|P31994-5|FCGR2B', 'nc|ENSG00000072694|P31994-2|FCGR2B', 'nc|ENSG00000072694|P31994-3|FCGR2B', 'nc|ENSG00000072694|P31994-4|FCGR2B', 'ENSG00000072694|ENST00000358671|FCGR2B', 'ENST00000480308.5_1_1:161647083-161647340:+|nuORF'] 109784 17396 TEDYLSLILNR True NCI_RA007_Epitope_Rep1 1335.7034305739899 1335.70232993586 71.8 2 0.2711156791612021 0.00039635354736424893 0.00018640674280680423 ['CON__P02769'] 103341 15065 SPNELVDDLFK True H1975_Epitope_Rep1 1275.63468230783 1275.63358993586 63.199 2 0.2710976296254322 0.00039635354736424893 0.00018648389052429418 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-4|NSFL1C'] 100771 11114 SLEDQVEM[Oxidation]LR True NCI_RA007_Epitope_Rep2 1234.58635259686 1234.58524993586 47.81 2 0.2710832874621126 0.00039635354736424893 0.0001865452149093959 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 74910 17118 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69592490379 70.998 3 0.2710812875286074 0.00039635354736424893 0.00018655376785223338 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 86677 20957 QLIDKVWQL True PC9_epitope_Rep1 1141.64954452633 1141.64844993586 85.434 2 0.27107157061712644 0.00039635354736424893 0.00018659532891811866 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 23637 17572 EWSPYTKIFQF True NCI_RA007_Epitope_Rep5 1444.7027022979998 1444.70160993586 74.376 2 0.271057711957066 0.00039635354736424893 0.00018665462107024625 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 71003 20164 LYIGWDKHYGF True PC9_epitope_Rep3 1397.67682190333 1397.67572993586 82.815 2 0.2710572090566766 0.00039635354736424893 0.0001866567730072063 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 24185 20151 EYQKVWNLF True PC9_epitope_Rep4 1225.6131590176099 1225.61206993586 85.648 2 0.27103879962418115 0.00039635354736424893 0.00018673556503324862 ['ENSG00000059378|ENST00000263549|PARP12'] 32262 20905 GFAFVTFDDHD True PC9_epitope_Rep5 1269.5302172392899 1269.52912993586 85.466 2 0.27102314727039384 0.00039635354736424893 0.00018680258301486237 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 134975 14204 WAYPRQVFI True H1975_Epitope_Rep2 1178.6236641316598 1178.6225699358602 59.786 2 0.27099617718963037 0.00039635354736424893 0.00018691811611932423 ['nc|ENSG00000005700|Q9P2D0-2|IBTK', 'ENST00000369751.2_1_6:82901346-82950269:-|nuORF', 'ENSG00000005700|ENST00000306270|IBTK', 'ENST00000505222.5_1_6:82901346-82950269:-|nuORF'] 95965 8284 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64422490379 38.542 3 0.2709871874692923 0.00039635354736424893 0.0001869566417411527 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 141320 4103 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61269490379 20.873 3 0.27096339639494527 0.00039635354736424893 0.00018705863723165504 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 68215 9656 LTDYLKNTY True H1975_Epitope_Rep2 1129.56554011885 1129.56444993586 42.122 2 0.27095630085354233 0.00039635354736424893 0.00018708906754629645 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000461836.5_1_2:162903409-162929972:-|nuORF'] 49382 10070 KESYSVYVYK True PC9_epitope_Rep3 1264.6339540318397 1264.63231490379 43.688 3 0.2709383697741018 0.00039635354736424893 0.00018716598982089746 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 106333 13422 STGIYEALELR True NCI_RA007_Epitope_Rep1 1250.65066672514 1250.6495699358602 56.213 2 0.2709363894260223 0.00039635354736424893 0.0001871744872291696 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 4851 16506 ALELDSNLYR True PC9_epitope_Rep5 1192.60880191316 1192.6077099358602 68.488 2 0.27087927768527964 0.00039635354736424893 0.00018741971237482387 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 119833 8635 VDDFLANEAK True H1975_Epitope_Rep3 1120.540053647 1120.53894993586 38.21 2 0.27087531789631225 0.00039635354736424893 0.00018743672675382178 ['nc|ENSG00000142657|P52209-2|PGD', 'ENSG00000142657|ENST00000270776|PGD'] 75859 14397 NLQEAEEWYK True PC9_epitope_Rep4 1308.59863115228 1308.5975299358602 63.287 2 0.27083812413005415 0.00039635354736424893 0.00018759661605872104 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 28462 11984 FSDNDKLYLY True H1975_Epitope_Rep3 1276.59756852312 1276.5964699358601 51.254 2 0.270824475393119 0.00039635354736424893 0.00018765532377666073 ['RFX5|p.L207*|1|0.1|ENSG00000143390|chr1:151343819-151343819|G/-|frameshift_variant', 'RFX5|p.R468Afs*98|1|0.13|ENSG00000143390|chr1:151342636-151342636|C/-|frameshift_variant', 'ENSG00000143390|ENST00000452671|RFX5', 'ENST00000479681.5_1_1:151317580-151318796:-|nuORF', 'nc|ENSG00000143390|P48382-2|RFX5'] 41026 5357 HTIDWVREK True NCI_RA007_Epitope_Rep4 1182.6145559999397 1182.6129149037902 27.173 3 0.27081460332178103 0.00039635354736424893 0.00018769779827810726 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3', 'CLCN3|p.A194Qfs*3|1|0.16|ENSG00000109572|chr4:169689202-169689202|G/-|frameshift_variant', 'ENST00000502998.1_1_4:170601253-170601544:+|nuORF'] 90230 6820 REEDLDAVEA True H1975_Epitope_Rep3 1145.52004647841 1145.51894993586 31.186 2 0.27080686663537884 0.00039635354736424893 0.00018773109203407555 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 74917 14911 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69592490379 65.297 3 0.2707714527915893 0.00039635354736424893 0.0001878835661126519 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 53325 19443 KQMEQISQFL True PC9_epitope_Rep3 1250.6329084860197 1250.63180993586 80.013 2 0.2707647570259162 0.00039635354736424893 0.00018791240862825202 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 74913 17210 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69646993586 71.354 2 0.2707596471054015 0.00039635354736424893 0.00018793442297968858 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 58517 6854 LEQEYVHQV True H1975_Epitope_Rep2 1143.55603806431 1143.5549499358601 31.282 2 0.2707568152544294 0.00039635354736424893 0.0001879466241570798 ['ENSG00000137760|ENST00000428149|ALKBH8', 'nc|ENSG00000137760|Q96BT7-4|ALKBH8'] 78186 14970 NYAWVYYHL True NCI_RA007_Epitope_Rep4 1227.57129420563 1227.57018993586 65.047 2 0.27061464567872684 0.00039635354736424893 0.0001885601899825833 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant', 'ENSG00000119917|ENST00000371818|IFIT3'] 91278 12454 RGLDDIKDLKV True PC9_epitope_Rep6 1270.7245003717399 1270.72285490379 59.331 3 0.2706037995831271 0.00039635354736424893 0.00018860708110711915 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF'] 72662 5072 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 24.591 2 0.27056674262422953 0.00039635354736424893 0.00018876737827437502 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 48357 12671 IYSVFRNAASF True NCI_RA007_Epitope_Rep3 1273.6455217750497 1273.6444299358602 57.085 2 0.2705503499799655 0.00039635354736424893 0.00018883833140635183 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 141824 19817 YVDDTQFVRF True PC9_epitope_Rep3 1288.60880191316 1288.6077099358602 81.459 2 0.270536151948479 0.00039635354736424893 0.00018889980706822537 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 96267 14924 RYQQWMERF True PC9_epitope_Rep2 1342.6240751378198 1342.62241490379 62.667 3 0.2705228778004059 0.00039635354736424893 0.00018895730056325312 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 92135 5558 RLDTDHLRY True H1975_Epitope_Rep2 1187.60471959223 1187.60308490379 26.387 3 0.2705177378595245 0.00039635354736424893 0.0001889795675774557 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'ARAP1|p.F360Lfs*31|1|0.27|ENSG00000186635|chr11:72711442-72711442|A/-|frameshift_variant'] 54045 9649 KVIDPATATSV True PC9_epitope_Rep4 1100.607739284 1100.60664993586 44.741 2 0.2705059334271186 0.00039635354736424893 0.00018903071614277643 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 77290 8669 NSDLSEKLEY True H1975_Epitope_Rep1 1196.55609763396 1196.5550099358602 38.275 2 0.2704508128722526 0.00039635354736424893 0.00018926973691197235 ['ENSG00000117724|ENST00000366955|CENPF'] 141276 18864 YTDLLRLFEY True H1975_Epitope_Rep1 1331.67615319699 1331.6750499358602 78.663 2 0.2703819757685599 0.00039635354736424893 0.00018956866223903015 ['ENSG00000213639|ENST00000395366|PPP1CB'] 57218 9857 LDVTSVEDYK True H1975_Epitope_Rep3 1167.5659340416698 1167.5648299358602 42.944 2 0.27037876862675486 0.00039635354736424893 0.00018958260078440325 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 119893 9431 VDINAPDVDVR True H1975_Epitope_Rep3 1211.61461556959 1211.61350993586 41.279 2 0.2703674740518225 0.00039635354736424893 0.00018963169626186598 ['ENSG00000124942|ENST00000378024|AHNAK'] 44848 9121 INEVENQILTR True H1975_Epitope_Rep3 1327.7095785835897 1327.7084899358601 40.072 2 0.27033646497270303 0.00039635354736424893 0.00018976655261163423 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 108730 4986 SYRQSSATSSF True NCI_RA007_Epitope_Rep3 1219.5469299325898 1219.5458299358602 26.61 2 0.2703255293911791 0.00039635354736424893 0.00018981413360910328 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 120838 10236 VELQELNDR True PC9_epitope_Rep2 1114.5618517207397 1114.56074993586 44.708 2 0.2703224453032715 0.00039635354736424893 0.0001898275547151946 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 49385 3450 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 18.076 3 0.27029013199632546 0.00039635354736424893 0.0001899682305396419 ['ENSG00000044574|ENST00000324460|HSPA5'] 9846 14773 AYLESFYKF True NCI_RA007_Epitope_Rep5 1166.5648118428599 1166.56370993586 63.496 2 0.270237610796146 0.00039635354736424893 0.00019019710414408278 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 90929 9612 REYQELMNV True NCI_RA007_Epitope_Rep3 1180.55465816532 1180.5535699358602 44.891 2 0.2702250186152728 0.00039635354736424893 0.0001902520185961505 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 24015 21251 EYMLEKSFYQF True PC9_epitope_Rep1 1483.6693535643901 1483.66824993586 86.565 2 0.27021025110371616 0.00039635354736424893 0.0001903164398893294 ['ENSG00000039123|ENST00000230640|MTREX'] 130988 6770 VTDPEKLNNY True H1975_Epitope_Rep2 1191.57716743171 1191.57606993586 30.956 2 0.2701203831534893 0.00039635354736424893 0.0001907089481046255 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'DOT1L|p.D1250Efs*47|1|0.2|ENSG00000104885|chr19:2226271-2226293|CATCGGCCTGGCCAAGTCGGCGG/-|frameshift_variant', 'ENSG00000104885|ENST00000398665|DOT1L', 'DOT1L|p.N522Tfs*35|1|0.31|ENSG00000104885|chr19:2213545-2213545|A/-|frameshift_variant'] 107670 5238 SVQSDQGYISR True NCI_RA007_Epitope_Rep5 1238.58912909774 1238.58802993586 26.845 2 0.2701140045944698 0.00039635354736424893 0.00019073683796313922 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 105576 5770 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.5379099358602 27.188 2 0.27005129546721235 0.00039635354736424893 0.00019101124737692568 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 48324 11049 IYSEEIVEM[Oxidation]YK True NCI_RA007_Epitope_Rep1 1418.66393421122 1418.6628299358601 46.973 2 0.27004920991502035 0.00039635354736424893 0.00019102038035362124 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 45010 8118 IPEEEQM[Oxidation]GLLR True H1975_Epitope_Rep1 1329.6598518902897 1329.6587499358602 36.171 2 0.27002279595826445 0.00039635354736424893 0.00019113608927854734 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 139168 8364 YLDYHMEKY True H1975_Epitope_Rep3 1260.5485101557201 1260.54685490379 37.155 3 0.2699892362017311 0.00039635354736424893 0.00019128320234216333 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 86988 4635 QLYWSHPRK True NCI_RA007_Epitope_Rep4 1213.6356257976897 1213.6345299358602 24.244 2 0.26994384198311355 0.00039635354736424893 0.0001914823736017423 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 62110 14740 LLEEEIIAFSK True H1975_Epitope_Rep1 1290.7071189720998 1290.7060299358602 61.918 2 0.269859502313066 0.00039635354736424893 0.00019185297320418402 ['nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'ENST00000517342.1_1_8:57389388-57389772:-|nuORF'] 48887 3716 KEAYVNANQA True NCI_RA007_Epitope_Rep4 1106.5356369729 1106.53452993586 20.427 2 0.2698492756952282 0.00039635354736424893 0.00019189795911720824 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'ENST00000495407.1_1_10:121602688-121616909:-|nuORF'] 54047 10958 KVIDPATATSV True PC9_epitope_Rep5 1100.607739284 1100.60664993586 47.139 2 0.2698464798728247 0.00039635354736424893 0.00019191025951126867 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 140861 9068 YSDVGRYIDHY True H1975_Epitope_Rep2 1386.62042922602 1386.6193299358602 39.834 2 0.2698391206812007 0.00039635354736424893 0.00019194264050641013 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 115861 5178 TSEDISQTSKY True H1975_Epitope_Rep3 1257.5724759740901 1257.57136993586 25.017 2 0.2698340624714901 0.00039635354736424893 0.00019196490018179665 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 13780 20598 DQIAKYWEL True PC9_epitope_Rep2 1164.5815245361598 1164.5804299358601 84.663 2 0.26975287278509574 0.00039635354736424893 0.00019232254585521848 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 53964 6611 KTYGEIFEK True NCI_RA007_Epitope_Rep4 1113.57062549929 1113.5695299358601 32.058 2 0.26974768457925397 0.00039635354736424893 0.00019234542290146427 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 125943 10118 VLDEAFQRY True H1975_Epitope_Rep2 1139.56112344475 1139.56002993586 43.915 2 0.26966579664516205 0.00039635354736424893 0.00019270686348656655 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000563908.1_1_15:72647792-72668286:-|nuORF', 'ENST00000569509.5_1_15:72643558-72668681:-|nuORF'] 14392 11006 DTDEYVLKY True H1975_Epitope_Rep3 1144.52882025696 1144.5277299358602 47.423 2 0.26965167004349666 0.00039635354736424893 0.00019276928487099073 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1'] 134001 10170 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5287299358602 43.995 2 0.2696457847772057 0.00039635354736424893 0.00019279529614351452 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 14289 16558 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep2 1204.6485589305998 1204.64746993586 69.135 2 0.2695985742982787 0.00039635354736424893 0.00019300408083918703 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 22336 4552 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 22.617 2 0.26955170348691204 0.00039635354736424893 0.00019321158740703582 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 14141 9571 DSDINNRLVY True H1975_Epitope_Rep2 1207.58331544131 1207.5822099358602 41.789 2 0.26951513614747574 0.00039635354736424893 0.0001933736335816678 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'ELP5|p.R263Kfs*6|1|0.25|ENSG00000170291|chr17:7258873-7258876|AGAG/-|frameshift_variant', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5', 'nc|ENSG00000170291|Q8TE02-3|ELP5'] 66232 5198 LSEVNRTGTQY True H1975_Epitope_Rep3 1266.62042922602 1266.6193299358602 25.084 2 0.26949730342729494 0.00039635354736424893 0.0001934527076829133 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 73370 14981 MTELPAPLSY True H1975_Epitope_Rep3 1120.5474475265598 1120.54634993586 63.012 2 0.26947615576289285 0.00039635354736424893 0.00019354652293541275 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 46644 14044 ITDLPDHLLSY True H1975_Epitope_Rep1 1285.6554177524101 1285.65432993586 59.184 2 0.2694653493367197 0.00039635354736424893 0.00019359447998595618 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 95909 19559 RYLDWIKKI True PC9_epitope_Rep5 1233.7233781729299 1233.7217249037901 80.283 3 0.2694644338745811 0.00039635354736424893 0.00019359854319541593 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 68434 5259 LTEVNKAGTQY True H1975_Epitope_Rep3 1222.61936659686 1222.61826993586 25.311 2 0.26944771010226043 0.00039635354736424893 0.00019367278542891308 ['ENSG00000170542|ENST00000380698|SERPINB9'] 78637 18951 NYTDIKDYL True PC9_epitope_Rep4 1143.54480467427 1143.54370993586 80.983 2 0.2694318689584161 0.00039635354736424893 0.0001937431356880532 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 24885 20502 FAYDGKDYLTL True PC9_epitope_Rep3 1304.6288686513997 1304.6277699358602 84.121 2 0.26940494949125626 0.00039635354736424893 0.00019386274330839408 ['ENSG00000204592|ENST00000376630|HLA-E'] 139180 9635 YLEETSIRY True H1975_Epitope_Rep2 1172.57135377528 1172.5702499358601 42.039 2 0.26936351767263755 0.00039635354736424893 0.00019404697622422203 ['ENSG00000158796|ENST00000368006|DEDD', 'nc|ENSG00000158796|O75618-2|DEDD'] 139019 9448 YLAEFATGNDR True NCI_RA007_Epitope_Rep1 1255.5833154413099 1255.5822099358602 40.744 2 0.26936279859730017 0.00039635354736424893 0.00019405017525036403 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000453697.1_1_7:63894611-63894797:+|nuORF'] 62052 9048 LLDTAQKNLY True H1975_Epitope_Rep2 1177.63428838501 1177.6331899358602 39.756 2 0.2693284049079375 0.00039635354736424893 0.00019420324777996711 ['ENSG00000142556|ENST00000270649|ZNF614', 'nc|ENSG00000142556|Q8N883-2|ZNF614'] 41391 21829 HYFDPQYFEF True PC9_epitope_Rep1 1391.58225281215 1391.5811499358601 88.775 2 0.2693007789409321 0.00039635354736424893 0.00019432628747272684 ['ENSG00000084623|ENST00000677711|EIF3I'] 49083 5768 KEIEEYIHKP True H1975_Epitope_Rep2 1284.6714021697198 1284.66976490379 27.181 3 0.26929288063505424 0.00039635354736424893 0.0001943614790580789 ['ENSG00000039123|ENST00000230640|MTREX'] 108514 17642 SYMLVNENRF True PC9_epitope_Rep1 1271.5968573304701 1271.59576993586 72.653 2 0.2691944542009623 0.00039635354736424893 0.00019480056235200027 ['ENSG00000182195|ENST00000370526|LDOC1'] 71937 7334 MEQQTLSIAKA True H1975_Epitope_Rep3 1218.62782310558 1218.62672993586 33.186 2 0.2691746577233342 0.00039635354736424893 0.00019488899497698432 ['ENSG00000104738|ENST00000649973|MCM4'] 45485 15635 IQLVEEELDR True PC9_epitope_Rep2 1242.6455813446998 1242.64448993586 65.416 2 0.2691433058485179 0.00039635354736424893 0.00019502912886380064 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 95290 7221 RVQEAVESMVK True NCI_RA007_Epitope_Rep2 1274.66527124346 1274.6641699358602 32.707 2 0.2691061154685351 0.00039635354736424893 0.00019519549006978925 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 10991 10900 DALNIETAIK True H1975_Epitope_Rep1 1086.5920892198599 1086.59098993586 46.889 2 0.26908811736372956 0.00039635354736424893 0.00019527605080317458 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 27492 7182 FM[Oxidation]ETATESLAK True NCI_RA007_Epitope_Rep1 1242.58020458726 1242.57910993586 31.926 2 0.26903938010826395 0.00039635354736424893 0.00019549436928577177 ['CON__Q58D62'] 22376 16000 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69076993586 66.743 2 0.2690185182967198 0.00039635354736424893 0.00019558789445355725 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 41266 6932 HVLVTLGEK True PC9_epitope_Rep4 994.58113061334 994.58002993586 33.895 2 0.2689929428900389 0.00039635354736424893 0.00019570261219611988 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 24012 8200 EYMKHTRLF True PC9_epitope_Rep6 1223.6121134717898 1223.61046490379 41.113 3 0.26899231539332985 0.00039635354736424893 0.0001957054276612559 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 28994 9357 FTEEKWSQY True H1975_Epitope_Rep2 1216.540053647 1216.53894993586 40.954 2 0.2689341119863109 0.00039635354736424893 0.00019596675239007372 ['ENSG00000105877|ENST00000409508|DNAH11'] 49373 7259 KESYSVYVYK True NCI_RA007_Epitope_Rep1 1264.6339540318397 1264.63231490379 32.226 3 0.26891536227174684 0.00039635354736424893 0.0001960510102587609 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 14383 8577 DTDAQQAFKY True H1975_Epitope_Rep3 1185.5302172392899 1185.52912993586 37.982 2 0.2688858127909655 0.00039635354736424893 0.00019618387401273288 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 108543 19663 SYNDELQFLEK True PC9_epitope_Rep5 1384.6510606479599 1384.64996993586 80.691 2 0.26887388160895753 0.00039635354736424893 0.00019623754591380387 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF', 'ENST00000463455.1_1_22:32804140-32808230:-|nuORF'] 65852 15480 LSDLLDWKY True H1975_Epitope_Rep2 1151.58627556343 1151.5851699358602 64.7 2 0.268871031539423 0.00039635354736424893 0.00019625036900323598 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 77355 6721 NSEEMKEAYY True H1975_Epitope_Rep2 1262.5125185698198 1262.5114299358602 30.766 2 0.2688491207589373 0.00039635354736424893 0.00019634897845445081 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 131269 9797 VTFNVTTVDTK True NCI_RA007_Epitope_Rep1 1223.63976768827 1223.6386699358602 42.11 2 0.26884491615435196 0.00039635354736424893 0.00019636790694915968 ['ENSG00000213719|ENST00000375784|CLIC1'] 127311 12122 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1313.6325745132897 1313.6314699358602 51.643 2 0.26882472144092456 0.00039635354736424893 0.0001964588459730675 ['CON__P02769'] 15274 8957 EAESSPFVER True PC9_epitope_Rep3 1149.5302172392899 1149.52912993586 39.401 2 0.2688166156932626 0.00039635354736424893 0.00019649535891240295 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 78408 16298 NYLNHWNHF True PC9_epitope_Rep5 1243.55229009655 1243.55118993586 67.684 2 0.2688071399381271 0.00039635354736424893 0.00019653805176944383 ['ENSG00000167363|ENST00000300784|FN3K'] 46024 9202 ISGLIYEETR True H1975_Epitope_Rep1 1179.6135529404298 1179.61244993586 40.302 2 0.2688041795781697 0.00039635354736424893 0.00019655139152664771 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 53405 17940 KQVEEIFNLKF True PC9_epitope_Rep6 1393.7605515272896 1393.7589149037901 81.633 3 0.2687731364995222 0.00039635354736424893 0.0001966913302034478 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 17035 9860 EGEFVAQFK True NCI_RA007_Epitope_Rep2 1053.5131106231697 1053.51200993586 42.979 2 0.26875414033946166 0.00039635354736424893 0.0001967770119525211 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 66073 9596 LSEINKPNFY True H1975_Epitope_Rep1 1223.61863832087 1223.61754993586 41.836 2 0.2687467870735807 0.00039635354736424893 0.0001968101887274769 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 96043 21800 RYLPTGSFPFL True PC9_epitope_Rep5 1296.6866583110398 1296.68556993586 88.885 2 0.26872112315262964 0.00039635354736424893 0.0001969260241959872 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 53323 18702 KQMEQISQFL True PC9_epitope_Rep2 1250.6329084860197 1250.63180993586 77.31 2 0.2687209575648563 0.00039635354736424893 0.00019692677180687093 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 114015 9037 TPAQFDADELR True NCI_RA007_Epitope_Rep5 1261.5938801250097 1261.59278993586 41.418 2 0.26869346091547525 0.00039635354736424893 0.0001970509556444481 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 42822 4608 IEQAYDNPHEA True H1975_Epitope_Rep3 1285.55749461629 1285.5563899358601 22.847 2 0.2686913990017127 0.00039635354736424893 0.00019706027108056076 ['ENSG00000174231|ENST00000304992|PRPF8'] 107486 9527 SVMSTVEWNK True NCI_RA007_Epitope_Rep4 1179.5594091925898 1179.55830993586 43.497 2 0.2686908576886844 0.00039635354736424893 0.00019706271672972154 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 41070 6323 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60802993586 29.297 2 0.268622361943604 0.00039635354736424893 0.000197372425558449 ['CON__P12763'] 105637 11255 SSDTADFRDLY True H1975_Epitope_Rep3 1288.55716026312 1288.55606993586 48.396 2 0.2686203417088131 0.00039635354736424893 0.00019738156760523357 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 3501 9550 [Acetylation]-AGLNSLEAVKR True H1975_Epitope_Rep1 1198.66698581192 1198.6658899358602 41.659 2 0.2685891634887739 0.00039635354736424893 0.0001975227103224308 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 95769 5021 RYIAQVKHL True NCI_RA007_Epitope_Rep4 1126.66111226954 1126.65946490379 25.799 3 0.2685597065346944 0.00039635354736424893 0.00019765615380510574 ['ENST00000267068.5_2_13:33110791-33110824:-|nuORF'] 14753 21683 DVNFEFPEFQL True H1975_Epitope_Rep3 1383.63468230783 1383.63358993586 90.622 2 0.26851155706779245 0.00039635354736424893 0.00019787447104664392 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 117487 20806 TVRELFEEL True PC9_epitope_Rep5 1134.5920892198599 1134.59098993586 85.079 2 0.2685115539520445 0.00039635354736424893 0.00019787448518174716 ['ENSG00000150990|ENST00000308736|DHX37'] 29041 6100 FTERSKLIDHY True H1975_Epitope_Rep3 1407.71466396403 1407.71302490379 28.476 3 0.2685020258354984 0.00039635354736424893 0.0001979177157804863 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 105653 12220 SSEELLSLKY True H1975_Epitope_Rep2 1167.60231955039 1167.6012299358601 52.087 2 0.2684992826791503 0.00039635354736424893 0.00019793016367630748 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 56793 11521 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep2 1248.6271547796798 1248.62604993586 49.405 2 0.2684695214257191 0.00039635354736424893 0.0001980652647200893 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 125941 10522 VLDEADLSRY True H1975_Epitope_Rep2 1179.57716743171 1179.57606993586 45.493 2 0.2684626719562007 0.00039635354736424893 0.00019809637092205485 ['ENSG00000204970|ENST00000504120|PCDHA1', 'PCDHA1|p.C759Lfs*3|1|0.36|ENSG00000204970|chr5:140788564-140788565|-/T|frameshift_variant', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1', 'PCDHA1|p.R635H|1|0.3|ENSG00000204970|chr5:140788194-140788194|G/A|missense_variant'] 72488 6886 MLDHQPPQY True H1975_Epitope_Rep2 1127.50697969691 1127.50588993586 31.408 2 0.26846030100255913 0.00039635354736424893 0.00019810713951827738 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 55245 12760 LADIYRELY True H1975_Epitope_Rep1 1154.5971746003 1154.5960699358602 54.142 2 0.26844169391688155 0.00039635354736424893 0.00019819167110197888 ['TAF6L|p.R593Pfs*8|1|0.26|ENSG00000162227|chr11:62787205-62787205|G/-|frameshift_variant', 'ENSG00000162227|ENST00000294168|TAF6L'] 88255 14098 QSDPWQQELY True H1975_Epitope_Rep2 1292.5673310240002 1292.56622993586 59.383 2 0.2684394926292093 0.00039635354736424893 0.00019820167389344016 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 25214 12625 FDEFGIIR True H1975_Epitope_Rep1 995.5076313199098 995.50652993586 53.612 2 0.2683799500113916 0.00039635354736424893 0.0001984724312593654 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 112165 4998 TKDGVVEITGK True NCI_RA007_Epitope_Rep2 1145.62920300457 1145.6275649037902 24.065 3 0.26837867760463296 0.00039635354736424893 0.00019847822129939453 ['ENSG00000106211|ENST00000248553|HSPB1'] 142172 7377 YVTIIDAPGHR True H1975_Epitope_Rep1 1240.6564208119198 1240.65478490379 33.379 3 0.26837857875501875 0.00039635354736424893 0.00019847867111800102 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 16085 12549 EEAENTLQSFR True PC9_epitope_Rep3 1322.61025846514 1322.60916993586 53.291 2 0.2683620731846737 0.00039635354736424893 0.00019855379461221172 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 118497 21137 TYQDIFRDF True PC9_epitope_Rep5 1203.5560380643099 1203.5549499358601 86.363 2 0.268349862159656 0.00039635354736424893 0.0001986093902312857 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 53289 14713 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6750499358602 61.861 2 0.2683138179000649 0.00039635354736424893 0.0001987735872296952 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 132457 10022 VVDEDHELIY True H1975_Epitope_Rep2 1230.5768330785402 1230.5757299358602 43.541 2 0.2683020026721896 0.00039635354736424893 0.0001988274402254009 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 130902 5819 VTDDSPKYNY True H1975_Epitope_Rep3 1200.5298828861198 1200.52878993586 27.405 2 0.268281401029178 0.00039635354736424893 0.00019892137605720202 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 22379 15750 ETEEDKFLLLY True H1975_Epitope_Rep3 1398.6918628307799 1398.69076993586 66.025 2 0.2682533307861451 0.00039635354736424893 0.00019904943748146043 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 120542 12594 VEFTRSLFVN True NCI_RA007_Epitope_Rep4 1210.6346227381798 1210.63352993586 55.463 2 0.26822643812653874 0.00039635354736424893 0.00019917220401857353 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 109470 16328 TDLLLEPYNK True PC9_epitope_Rep2 1204.6339540318397 1204.6328499358601 68.052 2 0.2682174109790938 0.00039635354736424893 0.00019921343046590503 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 121907 21425 VFRLQFDEF True PC9_epitope_Rep1 1199.5975089534697 1199.59640993586 87.249 2 0.2681958909529492 0.00039635354736424893 0.00019931174563059384 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11', 'nc|ENSG00000166167|Q9Y297-2|BTRC', 'ENSG00000166167|ENST00000370187|BTRC'] 24313 15649 EYVEKFYRI True PC9_epitope_Rep3 1245.6393737654498 1245.63772490379 65.34 3 0.2681608787177918 0.00039635354736424893 0.00019947180440426979 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 70314 8241 LVSESSDVLPK True NCI_RA007_Epitope_Rep1 1172.6288686514001 1172.6277699358602 36.055 2 0.2681509636688793 0.00039635354736424893 0.00019951715453570942 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 121415 16643 VEVTEFEDIK True PC9_epitope_Rep1 1207.59723416995 1207.59612993586 68.846 2 0.2681022311749623 0.00039635354736424893 0.0001997402007328582 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 82072 15387 PM[Oxidation]FIVNTNVPR True PC9_epitope_Rep1 1302.6754423847801 1302.6743499358602 64.004 2 0.26805337065739254 0.00039635354736424893 0.00019996408364452236 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 78306 21616 NYIPRFWTF True PC9_epitope_Rep2 1242.6185787512197 1242.61748993586 88.62 2 0.26801183549782864 0.00039635354736424893 0.00020015459881616085 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 25471 13490 FEELNM[Oxidation]DLFR True NCI_RA007_Epitope_Rep1 1328.6070880414397 1328.6059899358602 56.477 2 0.2680078181688084 0.00039635354736424893 0.00020017303530611886 ['ENSG00000044574|ENST00000324460|HSPA5'] 54386 14749 KYFDKVVTL True PC9_epitope_Rep2 1111.62774645259 1111.62664993586 61.999 2 0.267971128237798 0.00039635354736424893 0.00020034149296330666 ['ENSG00000166813|ENST00000394412|KIF7'] 137164 10180 YAYDGKDYL True NCI_RA007_Epitope_Rep1 1106.4920408254197 1106.49094993586 43.609 2 0.26797041209707284 0.00039635354736424893 0.00020034478245479242 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 142695 5144 YYPTEDVPRK True NCI_RA007_Epitope_Rep5 1266.6244519772997 1266.6228149037902 26.482 3 0.26794992716243454 0.00039635354736424893 0.00020043890002635186 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 137353 7476 YDNEFGYSNR True NCI_RA007_Epitope_Rep2 1263.5156298043098 1263.51452993586 33.708 2 0.26794173894851353 0.00039635354736424893 0.0002004765329797319 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 70057 16154 LVNELTEFAK True PC9_epitope_Rep4 1162.6233893481399 1162.6222899358602 70.076 2 0.2679124060771467 0.00039635354736424893 0.00020061140467872 ['CON__P02769'] 140746 11130 YSDDNPYYNY True H1975_Epitope_Rep2 1312.48841199696 1312.4873099358601 47.848 2 0.26786264434948504 0.00039635354736424893 0.00020084041558678285 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 61998 9574 LLDPSQKNLY True H1975_Epitope_Rep2 1189.63428838501 1189.6331899358602 41.801 2 0.26785836368190447 0.00039635354736424893 0.0002008601280871463 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 88659 4780 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 23.475 2 0.2678274981044076 0.00039635354736424893 0.0002010023216399358 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 24177 15018 EYQKVWNLF True NCI_RA007_Epitope_Rep3 1225.6131590176099 1225.61206993586 66.537 2 0.2678244052503655 0.00039635354736424893 0.00020101657555838713 ['ENSG00000059378|ENST00000263549|PARP12'] 74172 5182 NEEEIRANVA True H1975_Epitope_Rep2 1143.55201531303 1143.55090993586 25.005 2 0.2677815654969072 0.00039635354736424893 0.00020121411366993467 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 11526 11365 DFM[Oxidation]IQGGDFTR True H1975_Epitope_Rep1 1301.5710368858895 1301.56992993586 48.692 2 0.26776262460490746 0.00039635354736424893 0.00020130151387635277 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 118493 21203 TYQDIFRDF True PC9_epitope_Rep1 1203.5560380643099 1203.5549499358601 86.388 2 0.2677553979630556 0.00039635354736424893 0.00020133487026776156 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 27669 9844 FPGQLNADLR True H1975_Epitope_Rep3 1129.5880068989297 1129.5869099358601 42.894 2 0.2677485120284778 0.00039635354736424893 0.0002013666591899542 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 61905 7479 LLDEHHISY True H1975_Epitope_Rep2 1125.54547338061 1125.54436993586 33.715 2 0.26774446756115483 0.00039635354736424893 0.0002013853328201304 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 106151 13796 STDNFTRILEY True H1975_Epitope_Rep2 1357.65139500113 1357.6502899358602 58.213 2 0.2676950308007805 0.00039635354736424893 0.00020161372654614045 ['ITGA5|p.E895Kfs*15|1|0.2|ENSG00000161638|chr12:54399908-54399908|C/-|frameshift_variant', 'ENSG00000161638|ENST00000293379|ITGA5'] 40959 13225 HTDDPLTWDY True H1975_Epitope_Rep3 1261.52513185885 1261.5240299358602 56.125 2 0.26763006128683653 0.00039635354736424893 0.00020191427490960377 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 7949 7427 ATATANQIILK True NCI_RA007_Epitope_Rep4 1142.66592286646 1142.66482993586 35.213 2 0.2676276046747122 0.00039635354736424893 0.0002019256479758553 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 69617 9542 LVDPASHTLY True H1975_Epitope_Rep2 1114.56587447202 1114.56476993586 41.675 2 0.2676189450110478 0.00039635354736424893 0.0002019657436428843 ['nc|ENSG00000135622|O95754-2|SEMA4F', 'ENSG00000135622|ENST00000357877|SEMA4F'] 103166 13023 SPIENIQRVA True PC9_epitope_Rep3 1125.6142216467701 1125.6131299358601 55.121 2 0.2675927022101007 0.00039635354736424893 0.00020208730083984917 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 39719 8277 HLVDEPQNLIK True H1975_Epitope_Rep1 1304.7088503076 1304.7072149037901 36.771 3 0.2675840646091173 0.00039635354736424893 0.00020212732641483193 ['CON__P02769'] 141089 7685 YSQADALKY True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 34.512 2 0.26756087634695225 0.00039635354736424893 0.0002022348172336844 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000586714.1_1_17:40854552-40854989:-|nuORF', 'ENST00000492143.5_1_7:148504740-148513906:-|nuORF', 'ENSG00000106462|ENST00000320356|EZH2', 'ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 90227 10977 REEDFYYTEV True H1975_Epitope_Rep3 1349.5775613545297 1349.5764699358601 47.311 2 0.2675549137051935 0.00039635354736424893 0.00020226246673258502 ['ENSG00000186918|ENST00000344423|ZNF395'] 78361 12982 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.6069699358602 55.223 2 0.26752282834428687 0.00039635354736424893 0.00020241131549945807 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 100891 6162 SLETENAGLR True NCI_RA007_Epitope_Rep2 1088.5462016566 1088.5451099358602 28.577 2 0.26748799236559045 0.00039635354736424893 0.00020257304903681516 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 39471 9009 HLDEAQRLLY True H1975_Epitope_Rep2 1256.65133543148 1256.6502299358601 39.605 2 0.26747827309868594 0.00039635354736424893 0.00020261819592035305 ['ENST00000600421.1_1_19:57901368-57922291:+|nuORF', 'nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547', 'nc|ENSG00000188785|Q8NEK5|ZNF548', 'ENSG00000188785|ENST00000336128|ZNF548'] 95160 8297 RVFVVGVGMTK True NCI_RA007_Epitope_Rep5 1191.67979910879 1191.67816490379 38.591 3 0.2674528824691842 0.00039635354736424893 0.00020273618528021635 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 106202 12814 STDVSDLLHQY True H1975_Epitope_Rep1 1276.5935457718401 1276.59244993586 54.353 2 0.26744639847726254 0.00039635354736424893 0.00020276632719267815 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 77351 5931 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 27.798 2 0.2674371755377832 0.00039635354736424893 0.00020280920929153146 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 15022 11689 DYLEKYYKF True NCI_RA007_Epitope_Rep3 1267.6124903112698 1267.6108349037902 53.094 3 0.26743261755830494 0.00039635354736424893 0.00020283040499179648 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 142747 12394 YYQNYFEKL True NCI_RA007_Epitope_Rep4 1266.5920892198599 1266.59098993586 54.669 2 0.26741506395449627 0.00039635354736424893 0.00020291205419971508 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 61915 16138 LLDEMQRLLY True H1975_Epitope_Rep2 1292.67985867844 1292.6787699358601 67.286 2 0.26737023621709544 0.00039635354736424893 0.00020312071632928695 ['nc|ENSG00000183647|Q6P9A1|ZNF530'] 54155 5251 KVQEMNYIQK True NCI_RA007_Epitope_Rep4 1279.6594575870297 1279.65781490379 26.74 3 0.26736406799241463 0.00039635354736424893 0.00020314944472114827 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 22283 13646 ETDEKDFYLYY True H1975_Epitope_Rep3 1484.6347418774799 1484.6336499358601 57.78 2 0.26730976394550093 0.00039635354736424893 0.00020340254052868994 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 13892 7555 DQVANSAFVER True NCI_RA007_Epitope_Rep2 1234.59421447818 1234.5931099358602 34.013 2 0.2673052502259553 0.00039635354736424893 0.0002034235919122399 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 14752 21796 DVNFEFPEFQL True H1975_Epitope_Rep1 1383.63468230783 1383.63358993586 90.598 2 0.26724618832545055 0.00039635354736424893 0.00020369924991115023 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 90398 5203 REIDVRLDRNA True H1975_Epitope_Rep3 1355.7269599832298 1355.7253049037902 25.103 3 0.2672409956171913 0.00039635354736424893 0.00020372350358507536 ['nc|ENSG00000104177|Q9P2K5-3|MYEF2', 'nc|ENSG00000104177|Q9P2K5-2|MYEF2', 'nc|ENSG00000104177|Q9P2K5|MYEF2', 'ENSG00000104177|ENST00000324324|MYEF2'] 105584 5339 SSDNATLTHY True H1975_Epitope_Rep2 1107.4832670468702 1107.4821699358602 25.587 2 0.2672209636393894 0.00039635354736424893 0.00020381709440466707 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 29345 8934 FVDFNSEEDAK True NCI_RA007_Epitope_Rep1 1299.5619112903898 1299.56080993586 38.752 2 0.2672089204438269 0.00039635354736424893 0.00020387338179688036 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 32065 12088 GESDDSILRLA True H1975_Epitope_Rep2 1174.58298108814 1174.58188993586 51.579 2 0.26717983441123955 0.00039635354736424893 0.00020400938809226373 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 19765 17209 ELSDFISYLQR True NCI_RA007_Epitope_Rep1 1369.68778050985 1369.6866899358602 71.071 2 0.267177722424274 0.00039635354736424893 0.00020401926728249103 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 57311 7293 LEAAIAEAEER True H1975_Epitope_Rep1 1200.59863115228 1200.5975299358602 33.063 2 0.26716979907225213 0.00039635354736424893 0.00020405633442578444 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF'] 53398 19788 KQVEEIFNLKF True PC9_epitope_Rep2 1393.7605515272896 1393.7589149037901 81.503 3 0.2671247804685216 0.00039635354736424893 0.00020426706922119375 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 25673 8108 FEQEYTRVC True H1975_Epitope_Rep2 1173.5124590001699 1173.51136993586 36.137 2 0.2671227089355422 0.00039635354736424893 0.00020427677143678384 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 75570 8457 NLDDGIDDER True PC9_epitope_Rep2 1160.49456000656 1160.49346993586 37.898 2 0.2671180175388009 0.00039635354736424893 0.0002042987457323009 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 95976 11442 RYLEQLHQL True PC9_epitope_Rep4 1198.64585612822 1198.64422490379 51.78 3 0.26710619977864825 0.00039635354736424893 0.0002043541100956471 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 550 4292 AAQDSTDLVAK True NCI_RA007_Epitope_Rep3 1117.5615173675699 1117.5604299358602 23.614 2 0.2670583039921359 0.00039635354736424893 0.00020457864832195758 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 120527 5104 VEFM[Oxidation]DDTSR True H1975_Epitope_Rep3 1114.46008945458 1114.45898993586 24.744 2 0.26704444649868164 0.00039635354736424893 0.00020464365914036706 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 32260 15074 GFAFVTFDDHD True NCI_RA007_Epitope_Rep5 1269.5302172392899 1269.52912993586 64.651 2 0.26704126884803137 0.00039635354736424893 0.0002046585696353623 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 24079 12148 EYPDRIMNTF True NCI_RA007_Epitope_Rep4 1284.5808729131597 1284.5797699358602 53.725 2 0.26701048361853064 0.00039635354736424893 0.00020480307957048644 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 71865 14763 MELQEMQLK True PC9_epitope_Rep5 1148.5569666644399 1148.55586993586 61.785 2 0.2669980181220718 0.00039635354736424893 0.00020486162332829935 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF'] 26166 19590 FHDDWISSI True PC9_epitope_Rep4 1118.5032742154601 1118.5021699358601 83.476 2 0.266983163314261 0.00039635354736424893 0.00020493141029370889 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 68212 13420 LTDYDIRFY True H1975_Epitope_Rep3 1204.57643915572 1204.57534993586 56.89 2 0.2669389695346867 0.00039635354736424893 0.00020513917077577993 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 65950 14337 LSDTKYLEMIY True H1975_Epitope_Rep1 1374.6741045916601 1374.6730099358601 60.337 2 0.2669225166684057 0.00039635354736424893 0.00020521657164323728 ['ENSG00000205339|ENST00000379719|IPO7'] 11179 6327 DDREDLVYQAK True H1975_Epitope_Rep1 1350.6415585934199 1350.6399149037902 29.402 3 0.26689840448709395 0.00039635354736424893 0.00020533005785087376 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENST00000498643.1_1_17:1302531-1303404:-|nuORF', 'ENST00000576854.1_1_17:1303083-1303470:-|nuORF'] 62242 19813 LLFEGEKITI True PC9_epitope_Rep4 1161.6645258841297 1161.6634299358602 84.337 2 0.2668966123598759 0.00039635354736424893 0.00020533849517264595 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 54088 11810 KVLEDQQNIRL True PC9_epitope_Rep3 1354.75686312918 1354.75522490379 50.443 3 0.2668939852139557 0.00039635354736424893 0.00020535086438408048 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32'] 109785 17217 TEDYLSLILNR True NCI_RA007_Epitope_Rep2 1335.7034305739899 1335.70232993586 71.708 2 0.2668358606825932 0.00039635354736424893 0.00020562471915853603 ['CON__P02769'] 141826 19806 YVDDTQFVRF True PC9_epitope_Rep5 1288.60880191316 1288.6077099358602 81.231 2 0.26682266451414816 0.00039635354736424893 0.00020568694408466904 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 139166 8535 YLDYHMEKY True H1975_Epitope_Rep2 1260.5485101557201 1260.54685490379 37.785 3 0.2668207057234994 0.00039635354736424893 0.0002056961821312176 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 108375 19134 SYLERHGLINF True PC9_epitope_Rep1 1347.6935345966297 1347.6924299358602 78.391 2 0.266787018554181 0.00039635354736424893 0.00020585512258253463 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 118902 7604 VADKVHLMY True H1975_Epitope_Rep2 1074.55320161334 1074.55210993586 34.201 2 0.26677970116606287 0.00039635354736424893 0.0002058896632334253 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 48981 4555 KEFEKEISA True H1975_Epitope_Rep2 1079.54989005471 1079.5487899358602 22.628 2 0.2667568840312092 0.00039635354736424893 0.00020599740543341977 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 28528 14243 FSEFTGVWKY True H1975_Epitope_Rep2 1262.5971746002997 1262.5960699358602 59.935 2 0.26675238055215333 0.00039635354736424893 0.00020601867747323501 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 18376 11630 EITALAPSTMK True PC9_epitope_Rep4 1160.61111041228 1160.61000993586 52.492 2 0.26674018669827615 0.00039635354736424893 0.00020607628579948688 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 12233 12015 DIISDTSGDFR True NCI_RA007_Epitope_Rep1 1224.5622456435601 1224.5611499358602 50.723 2 0.2667276193287274 0.00039635354736424893 0.00020613567563967485 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 120541 12199 VEFTRSLFVN True NCI_RA007_Epitope_Rep3 1210.6346227381798 1210.63352993586 55.118 2 0.26672639271319837 0.00039635354736424893 0.00020614147319667452 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 116578 11210 TTYLVLDEADR True NCI_RA007_Epitope_Rep2 1294.6404959642598 1294.6393899358602 48.188 2 0.26671445711806646 0.00039635354736424893 0.00020619789491347655 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 43069 15461 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep3 1233.62748913285 1233.62638993586 64.622 2 0.26669229231475783 0.00039635354736424893 0.00020630271298943277 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 127496 6807 VNLPINGNGKQ True NCI_RA007_Epitope_Rep5 1152.62512068364 1152.62402993586 32.869 2 0.26669004669366686 0.00039635354736424893 0.00020631333558204586 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 123314 8595 VGLQVVAVK True H1975_Epitope_Rep3 911.5804023373498 911.57930993586 38.052 2 0.26668565283530693 0.00039635354736424893 0.00020633412169179756 ['ENSG00000144381|ENST00000388968|HSPD1'] 3215 6337 AGELTEDEVER True NCI_RA007_Epitope_Rep2 1246.5677249468197 1246.5666299358602 29.256 2 0.2666849614641489 0.00039635354736424893 0.00020633739256556947 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 14799 9104 DVQM[Oxidation]LQDAISK True H1975_Epitope_Rep1 1262.6176527251398 1262.6165499358601 39.922 2 0.26667292552519584 0.00039635354736424893 0.00020639434286126115 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 139100 13493 YLDKEDTFFY True H1975_Epitope_Rep1 1339.5972341699498 1339.59612993586 57.02 2 0.2666254938450118 0.00039635354736424893 0.00020661892806495913 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 90584 8250 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 36.719 2 0.2666250673202094 0.00039635354736424893 0.00020662094873592378 ['ENSG00000026025|ENST00000544301|VIM'] 120529 5551 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep2 1114.46008945458 1114.45898993586 26.208 2 0.26661854345072444 0.00039635354736424893 0.00020665185818336657 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 140915 6221 YSEGYPGQRY True H1975_Epitope_Rep2 1218.53055159246 1218.5294499358602 28.895 2 0.26660356363310145 0.00039635354736424893 0.0002067228486054759 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 109920 4967 TEFTPTEKDE True H1975_Epitope_Rep2 1195.52446315251 1195.52336993586 24.188 2 0.26658766414731216 0.00039635354736424893 0.00020679822412663666 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 74001 9532 NDEELNKLLGK True NCI_RA007_Epitope_Rep5 1271.6721304457099 1271.6710299358601 43.302 2 0.26654739668518174 0.00039635354736424893 0.0002069892453687321 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 122062 17827 VFYPYPQYF True NCI_RA007_Epitope_Rep5 1222.5698972232997 1222.5688099358601 75.368 2 0.2665289643721693 0.00039635354736424893 0.00020707674374780002 ['ENSG00000103160|ENST00000219439|HSDL1'] 138574 10027 YIDEQFERY True H1975_Epitope_Rep1 1261.5615173675699 1261.5604299358602 43.507 2 0.26652734601350564 0.00039635354736424893 0.00020708442788218927 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 9849 20693 AYLESFYKF True PC9_epitope_Rep3 1166.5648118428599 1166.56370993586 84.869 2 0.26647594751768217 0.00039635354736424893 0.00020732862191261042 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 61898 13665 LLDEAQRLLY True H1975_Epitope_Rep2 1232.67648755016 1232.67538993586 57.701 2 0.26646570161796257 0.00039635354736424893 0.0002073773346097196 ['ENSG00000083817|ENST00000196489|ZNF416', 'ZIK1|p.K218Rfs*65|1|0.71|ENSG00000171649|chr19:57590460-57590460|G/-|frameshift_variant', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 132459 9954 VVDEDHELIY True H1975_Epitope_Rep3 1230.5768330785402 1230.5757299358602 43.321 2 0.2664488609803873 0.00039635354736424893 0.00020745742597690187 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 78301 16468 NYIPRFWTF True NCI_RA007_Epitope_Rep3 1242.6185787512197 1242.61748993586 72.554 2 0.2664257495783407 0.00039635354736424893 0.0002075673905376323 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 119825 6305 VDATAETDLAK True NCI_RA007_Epitope_Rep2 1132.5611830144 1132.56008993586 29.13 2 0.2662774656816546 0.00039635354736424893 0.00020827431909960144 ['ENSG00000155660|ENST00000652332|PDIA4'] 139163 8221 YLDYHMEKY True H1975_Epitope_Rep1 1260.5485101557201 1260.54685490379 36.565 3 0.266270815494373 0.00039635354736424893 0.00020830607964759248 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 121908 21352 VFRLQFDEF True PC9_epitope_Rep3 1199.5975089534697 1199.59640993586 87.427 2 0.266249015648307 0.00039635354736424893 0.00020841022729072004 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11', 'nc|ENSG00000166167|Q9Y297-2|BTRC', 'ENSG00000166167|ENST00000370187|BTRC'] 64838 9541 LQDGEFSM[Oxidation]DLR True NCI_RA007_Epitope_Rep1 1325.59216625329 1325.59106993586 41.11 2 0.26623940110660116 0.00039635354736424893 0.00020845617684398025 ['ENSG00000108518|ENST00000225655|PFN1'] 95663 13881 RYFDPANGKF True PC9_epitope_Rep3 1213.5880068989297 1213.58635490379 58.474 3 0.26623225170545806 0.00039635354736424893 0.00020849035164438178 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 54174 6185 KVTEGSFVYK True NCI_RA007_Epitope_Rep2 1156.61282466444 1156.61172993586 28.665 2 0.26620278110160495 0.00039635354736424893 0.00020863128312644994 ['ENSG00000057608|ENST00000380191|GDI2'] 27481 6608 FM[Oxidation]EKETPLRY True H1975_Epitope_Rep1 1328.6434735501598 1328.6418149037902 30.474 3 0.26608604033580535 0.00039635354736424893 0.00020919048797574368 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 72759 13488 M[Oxidation]NSFVNDIFER True H1975_Epitope_Rep1 1386.62380073474 1386.62270993586 57.0 2 0.2660564139130319 0.00039635354736424893 0.00020933264147377393 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 13085 13003 DLQFVEVTDVK True H1975_Epitope_Rep1 1291.6659824361102 1291.6648899358602 55.098 2 0.2660484299495414 0.00039635354736424893 0.00020937096667709534 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 71636 9861 [Acetylation]-M[Oxidation]DSTLTASEIR True H1975_Epitope_Rep3 1280.59183221642 1280.59072993586 42.961 2 0.2660262310512122 0.00039635354736424893 0.00020947756439365197 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 74906 15689 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69646993586 65.623 2 0.26590974259526534 0.00039635354736424893 0.00021003782651363774 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 54201 6464 KVVEGSFVYK True NCI_RA007_Epitope_Rep4 1154.6335601090198 1154.63191490379 31.462 3 0.26589724292574923 0.00039635354736424893 0.0002100980339540925 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 48359 13189 IYSVFRNAASF True NCI_RA007_Epitope_Rep5 1273.6455217750497 1273.6444299358602 57.409 2 0.26587800923161586 0.00039635354736424893 0.00021019071109509157 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 106702 5001 STTTGHLIYK True NCI_RA007_Epitope_Rep2 1119.5924235730301 1119.5913299358601 24.076 2 0.26587150464111564 0.00039635354736424893 0.0002102220625906437 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2'] 3426 10276 [Acetylation]-AGITTIEAVKR True NCI_RA007_Epitope_Rep1 1199.68738690333 1199.68628993586 43.979 2 0.26583236783621816 0.00039635354736424893 0.00021041079711194726 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 56620 10074 LDIDSPPITAR True H1975_Epitope_Rep1 1196.6401020414398 1196.63900993586 43.69 2 0.265802575753955 0.00039635354736424893 0.00021055458114085983 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 24007 8623 EYMKHTRLF True PC9_epitope_Rep4 1223.6121134717898 1223.61046490379 40.65 3 0.26577930987244663 0.00039635354736424893 0.0002106669365419433 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 100892 5618 SLETENAGLR True NCI_RA007_Epitope_Rep5 1088.5462016566 1088.5451099358602 28.298 2 0.2657509913310269 0.00039635354736424893 0.00021080377325450082 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 131013 5248 VTDQASHIY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 25.271 2 0.2657116411457271 0.00039635354736424893 0.00021099406330294936 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 46030 9453 ISGLIYEETR True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61244993586 42.997 2 0.2657037489957094 0.00039635354736424893 0.0002110322489594416 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 28106 12354 FQYDHEAFL True H1975_Epitope_Rep3 1168.5189242795998 1168.5178299358602 52.705 2 0.26568934372545844 0.00039635354736424893 0.00021110196577839343 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 72486 6697 MLDHQPPQY True H1975_Epitope_Rep2 1127.50697969691 1127.50588993586 30.669 2 0.26567108324087213 0.00039635354736424893 0.00021119037374304144 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 139949 7971 YQAVTATLEEK True NCI_RA007_Epitope_Rep2 1251.63468230783 1251.63358993586 35.637 2 0.265663131583897 0.00039635354736424893 0.00021122888320732563 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 53401 20145 KQVEEIFNLKF True PC9_epitope_Rep3 1393.7605515272896 1393.7594499358602 82.741 2 0.2656528449025384 0.00039635354736424893 0.00021127871151102864 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 71188 14570 LYNPKITSEL True PC9_epitope_Rep4 1176.63903941228 1176.6379499358602 63.961 2 0.26556630034396667 0.00039635354736424893 0.00021169839671636987 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 69671 12751 LVDTFLEDVK True H1975_Epitope_Rep1 1177.6230549949698 1177.6219499358601 54.107 2 0.26542991093205415 0.00039635354736424893 0.00021236149314198666 ['CON__P34955'] 27089 15536 FLGSFLYEYSR True H1975_Epitope_Rep1 1380.6714021697198 1380.6703099358601 65.033 2 0.2654135810461057 0.00039635354736424893 0.00021244102494004074 ['CON__P02769'] 54941 21947 KYPSPFFVF True PC9_epitope_Rep5 1130.5800679841798 1130.5789699358602 89.462 2 0.26540745635034574 0.00039635354736424893 0.00021247086187284117 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 65936 5659 LSDSGVTQRY True H1975_Epitope_Rep2 1124.5462016566 1124.5451099358602 26.764 2 0.2653794575911376 0.00039635354736424893 0.00021260731348285097 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF'] 9851 20695 AYLESFYKF True PC9_epitope_Rep5 1166.5648118428599 1166.56370993586 84.66 2 0.2653595103027542 0.00039635354736424893 0.00021270457989757815 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 21529 10679 ERMPEQIRL True PC9_epitope_Rep4 1170.61792712822 1170.61627490379 48.823 3 0.26535032782429885 0.00039635354736424893 0.00021274937022767288 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 4740 9703 ALDGRETDFY True H1975_Epitope_Rep2 1185.5302172392899 1185.52912993586 42.306 2 0.2653289524971141 0.00039635354736424893 0.0002128536714864648 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 14804 9466 DVQM[Oxidation]LQDAISK True NCI_RA007_Epitope_Rep2 1262.6176527251398 1262.6165499358601 41.431 2 0.2653018497319395 0.00039635354736424893 0.00021298599353184063 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 54342 15073 KYEELFPAF True NCI_RA007_Epitope_Rep4 1142.5648118428596 1142.56370993586 65.52 2 0.2652971617369616 0.00039635354736424893 0.00021300888977955734 ['ENSG00000105402|ENST00000263354|NAPA'] 89188 7630 QVSPEAGVQKV True PC9_epitope_Rep3 1140.6138872935999 1140.61278993586 34.345 2 0.2652877949358476 0.00039635354736424893 0.00021305464478234883 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 35664 8876 GTDWGEKGYY True H1975_Epitope_Rep2 1174.4931034545798 1174.49200993586 39.111 2 0.26527382783145637 0.00039635354736424893 0.00021312288966063894 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000527141.5_1_11:66331406-66331633:-|nuORF'] 140881 7517 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep1 1274.47613344154 1274.4750299358602 33.912 2 0.2652653046353943 0.00039635354736424893 0.0002131645457359867 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 140235 13262 YQYPRPLLI True H1975_Epitope_Rep3 1161.6546299067697 1161.6535299358602 56.27 2 0.26526396748816417 0.00039635354736424893 0.0002131710816192401 ['ENSG00000160991|ENST00000495936|ORAI2'] 106714 5745 STVGAGAYAYK True NCI_RA007_Epitope_Rep5 1086.53457434374 1086.53346993586 28.786 2 0.2652622248268777 0.00039635354736424893 0.0002131795999285045 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 118242 9146 TYLEKAIKI True NCI_RA007_Epitope_Rep5 1077.6433965167298 1077.6422899358602 41.83 2 0.26522283216755244 0.00039635354736424893 0.0002133722463430243 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 110430 12445 TEYSFLKEV True NCI_RA007_Epitope_Rep5 1114.55464108198 1114.55354993586 54.527 2 0.2651787445377702 0.00039635354736424893 0.0002135880599439226 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 139156 9374 YLDYDDTRY True H1975_Epitope_Rep1 1222.51423282198 1222.5131299358602 40.966 2 0.2651655690443746 0.00039635354736424893 0.0002136525978065161 ['ENSG00000184967|ENST00000330579|NOC4L', 'NOC4L|p.W207*|1|0.17|ENSG00000184967|chr12:132147896-132147896|G/-|frameshift_variant', 'ENST00000535343.5_1_12:132632219-132636084:+|nuORF'] 53986 10665 KVDSLLENLEK True NCI_RA007_Epitope_Rep2 1286.7081816012599 1286.70708993586 46.083 2 0.2651600263212499 0.00039635354736424893 0.00021367975370939184 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 55063 16171 KYTKIFNDF True PC9_epitope_Rep1 1174.60225998074 1174.60116993586 67.017 2 0.26515882397921314 0.00039635354736424893 0.00021368564489545824 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 12417 11948 DITSDTSGDFR True PC9_epitope_Rep1 1212.5258601348398 1212.5247699358601 50.824 2 0.2651460218779739 0.00039635354736424893 0.0002137483821957366 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 134228 19966 VYM[Oxidation]DWYEKF True PC9_epitope_Rep5 1295.55326156343 1295.55216993586 81.851 2 0.26514409012374024 0.00039635354736424893 0.000213757850450557 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 108932 11588 TADHNLLLYEA True H1975_Epitope_Rep2 1258.6193665968601 1258.61826993586 49.637 2 0.26510364682125187 0.00039635354736424893 0.00021395617481630028 ['ENSG00000183751|ENST00000568546|TBL3'] 137198 12213 YAYDGKDYLAL True NCI_RA007_Epitope_Rep3 1290.6132185872598 1290.6121299358601 55.177 2 0.265094881395262 0.00039635354736424893 0.00021399918268743488 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 103161 9810 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 48.193 2 0.26508044561866906 0.00039635354736424893 0.00021407003121167993 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 71187 15260 LYNPKITSEL True PC9_epitope_Rep2 1176.63903941228 1176.6379499358602 63.973 2 0.26505753319166947 0.00039635354736424893 0.0002141825300558602 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 104000 15774 SQDARFYAL True PC9_epitope_Rep3 1069.51925863277 1069.5181699358602 65.833 2 0.2650210308448909 0.00039635354736424893 0.00021436187706755765 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 65763 11774 LSDDRSNILIY True H1975_Epitope_Rep3 1307.67213044571 1307.6710299358601 50.433 2 0.26496372733794166 0.00039635354736424893 0.00021464372997576512 ['nc|ENSG00000142892|Q92643-2|PIGK', 'ENSG00000142892|ENST00000370812|PIGK'] 101692 9700 SLMHSFILK True NCI_RA007_Epitope_Rep3 1074.5895871220598 1074.58848993586 45.229 2 0.264960593856621 0.00039635354736424893 0.00021465915301215044 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 21053 8602 EQVANSAFVER True PC9_epitope_Rep2 1248.6098645423197 1248.6087699358602 38.448 2 0.2649321545646081 0.00039635354736424893 0.00021479918235803175 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 49470 15919 KEYWFVLTA True H1975_Epitope_Rep2 1155.59644632431 1155.5953499358602 66.433 2 0.2649278432335261 0.00039635354736424893 0.00021482041847074634 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 117297 14447 TVMELVKIIYK True NCI_RA007_Epitope_Rep4 1335.7835954709901 1335.7824899358602 62.922 2 0.26491730776057254 0.00039635354736424893 0.00021487232138538815 ['ENST00000522558.1_1_8:71553109-71556351:-|nuORF', 'ENSG00000147592|ENST00000276590|LACTB2'] 90572 7397 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 33.395 2 0.26489970936150714 0.00039635354736424893 0.00021495904776521062 ['ENSG00000026025|ENST00000544301|VIM'] 62014 8898 LLDQGQLNKY True H1975_Epitope_Rep2 1190.62953735774 1190.62844993586 39.195 2 0.2648986054643125 0.00039635354736424893 0.0002149644890314829 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 108542 18662 SYNDELQFLEK True PC9_epitope_Rep4 1384.6510606479599 1384.64996993586 79.861 2 0.26487650156149567 0.00039635354736424893 0.00021507347136124922 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF', 'ENST00000463455.1_1_22:32804140-32808230:-|nuORF'] 86567 11116 QLDVAGRVMQY True H1975_Epitope_Rep2 1278.6390564956198 1278.6379499358602 47.793 2 0.26486004496591975 0.00039635354736424893 0.00021515464583422253 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 137784 9030 YEQELKDLAA True H1975_Epitope_Rep2 1178.5819184589798 1178.58082993586 39.686 2 0.26480267707526806 0.00039635354736424893 0.00021543786110358177 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 23641 21115 EWSPYTKIFQF True PC9_epitope_Rep4 1444.7027022979998 1444.70160993586 89.381 2 0.26480082677664823 0.00039635354736424893 0.00021544700191998475 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 134009 9127 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5287299358602 40.445 2 0.2647987067886417 0.00039635354736424893 0.00021545747552932594 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 10992 11068 DALNIETAIK True H1975_Epitope_Rep1 1086.5920892198599 1086.59098993586 47.536 2 0.2647932436627742 0.00039635354736424893 0.00021548446796047235 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 96140 7682 RYPDNLKHL True PC9_epitope_Rep1 1154.61964138038 1154.61799490379 34.372 3 0.2647892399022425 0.00039635354736424893 0.00021550425205212498 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 44061 19827 IILEEGKEILV True PC9_epitope_Rep5 1254.7435044808199 1254.74240993586 81.31 2 0.2647819886457668 0.00039635354736424893 0.00021554008787932105 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 86582 8268 QLEDGRTLSDY True H1975_Epitope_Rep3 1295.59935942827 1295.5982699358601 36.786 2 0.2647819135485098 0.00039635354736424893 0.00021554045904241764 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 118753 20090 TYYRGFLTL True PC9_epitope_Rep2 1132.59169529704 1132.5905899358602 82.685 2 0.2647730367748274 0.00039635354736424893 0.0002155843364054635 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 90934 9971 REYQELMSV True H1975_Epitope_Rep3 1153.54375912845 1153.5426699358602 43.387 2 0.26475017251051985 0.00039635354736424893 0.00021569739431444922 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 7587 2635 ASFDKAKLK True NCI_RA007_Epitope_Rep4 1006.58113061334 1006.58002993586 14.757 2 0.26474452494915285 0.00039635354736424893 0.00021572532920043498 ['ENSG00000034510|ENST00000233143|TMSB10'] 25767 6340 FETLQAQAGK True NCI_RA007_Epitope_Rep2 1091.5611234447497 1091.56002993586 29.267 2 0.2647233824554665 0.00039635354736424893 0.00021582993982648523 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 62050 8482 LLDSSQKNLY True H1975_Epitope_Rep2 1179.61355294043 1179.61244993586 37.578 2 0.26472334836405537 0.00039635354736424893 0.00021583010854789842 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 74915 14982 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69646993586 65.566 2 0.2647186192949606 0.00039635354736424893 0.00021585351441034742 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 134221 20992 VYMDWYEKF True PC9_epitope_Rep3 1279.5583465634297 1279.55724993586 86.023 2 0.26466385516958907 0.00039635354736424893 0.00021612474705500205 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 105264 11644 SRLEQEIATYR True PC9_epitope_Rep2 1364.7048275563197 1364.70319490379 50.115 3 0.26464266116952256 0.00039635354736424893 0.00021622980711192755 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 137751 6546 YENEVALRQ True PC9_epitope_Rep6 1120.5512870370399 1120.55018993586 33.859 2 0.2646324879134507 0.00039635354736424893 0.0002162802547864579 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 139116 9362 YLDPNQRDLY True H1975_Epitope_Rep1 1295.61461556959 1295.61350993586 40.918 2 0.2646041292433008 0.00039635354736424893 0.00021642094350149337 ['ENSG00000189144|ENST00000536220|ZNF573'] 95157 8040 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67816490379 38.714 3 0.2645759181776003 0.00039635354736424893 0.00021656099091679542 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 11414 7198 DETNYGIPQR True H1975_Epitope_Rep1 1191.5520153130299 1191.55090993586 32.701 2 0.2645618142710056 0.00039635354736424893 0.00021663104059038393 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 84421 8772 QADTTRLEL True NCI_RA007_Epitope_Rep2 1045.54038800017 1045.53928993586 38.768 2 0.26452987494186386 0.00039635354736424893 0.00021678975712875878 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 14433 5754 DTDYRSM[Oxidation]EY True H1975_Epitope_Rep2 1194.4499186936998 1194.4488299358602 27.13 2 0.26451847819029795 0.00039635354736424893 0.00021684641935757542 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 37912 9262 GYSFTTTAER True PC9_epitope_Rep2 1131.51965255559 1131.5185499358602 40.964 2 0.2644905272347474 0.00039635354736424893 0.00021698544839939698 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 108563 20627 SYNNFFRMF True PC9_epitope_Rep4 1224.53861417836 1224.53750993586 87.498 2 0.26447396008775 0.00039635354736424893 0.0002170678961243315 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 22385 12100 ETEEGIYWRY True H1975_Epitope_Rep2 1344.5986311522797 1344.5975299358602 51.626 2 0.26446577788998404 0.00039635354736424893 0.0002171086270600099 ['nc|ENSG00000131650|Q8NCW0-6|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-4|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-3|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-5|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-2|KREMEN2', 'ENSG00000131650|ENST00000303746|KREMEN2'] 95038 3063 RTSEIYVHR True NCI_RA007_Epitope_Rep5 1159.6098049726697 1159.60816490379 16.972 3 0.2644502423131687 0.00039635354736424893 0.00021718598414907772 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 42261 11794 IDTIEIITDR True NCI_RA007_Epitope_Rep3 1187.63976768827 1187.6386699358602 53.508 2 0.2644170772256291 0.00039635354736424893 0.00021735121717044096 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 113892 6065 TNQELQEINR True NCI_RA007_Epitope_Rep2 1243.61567819875 1243.61458993586 28.197 2 0.2644149998780778 0.00039635354736424893 0.000217361570991655 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 74920 16854 NHIEPLKIQL True PC9_epitope_Rep5 1203.6975573479099 1203.69592490379 69.839 3 0.26439932172853625 0.00039635354736424893 0.0002174397292513437 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 39706 9969 HLTDAYFK True PC9_epitope_Rep5 993.49198125577 993.49088993586 43.322 2 0.2643875434447849 0.00039635354736424893 0.000217498464533791 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 126119 6955 VLETAEDIQER True NCI_RA007_Epitope_Rep5 1301.6463096206896 1301.64520993586 33.437 2 0.2643785911187493 0.00039635354736424893 0.00021754311812142703 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 103358 8102 SPNSYFM[Oxidation]DVK True H1975_Epitope_Rep3 1202.52777509158 1202.5266699358601 36.139 2 0.26433296090784386 0.00039635354736424893 0.00021777086123761163 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 14802 9818 DVQM[Oxidation]LQDAISK True NCI_RA007_Epitope_Rep1 1262.6176527251398 1262.6165499358601 42.193 2 0.26433272071522873 0.00039635354736424893 0.0002177720606851236 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 78308 20919 NYIPRFWTF True PC9_epitope_Rep4 1242.6185787512197 1242.61748993586 88.624 2 0.26431745891679415 0.00039635354736424893 0.0002178482869515026 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 25408 12181 FEDENFILK True NCI_RA007_Epitope_Rep2 1153.5655401188499 1153.56444993586 51.979 2 0.2643105263401781 0.00039635354736424893 0.00021788292108548742 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 75582 9526 NLDIERPTY True H1975_Epitope_Rep2 1119.5560380643099 1119.5549499358601 41.613 2 0.264303652619571 0.00039635354736424893 0.00021791726663002425 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'TUBA3D|p.R215G|1|0.05|ENSG00000075886|chr2:131480336-131480336|C/G|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 98618 13713 SFVNDIFER True NCI_RA007_Epitope_Rep5 1125.5454733806098 1125.54436993586 59.434 2 0.26428762867658395 0.00039635354736424893 0.00021799735365376504 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 32349 18732 GFGFVTFDDHD True PC9_epitope_Rep6 1255.51456717515 1255.51346993586 84.694 2 0.26427804056616455 0.00039635354736424893 0.00021804528874525228 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 86579 8265 QLEDGRTLSDY True H1975_Epitope_Rep2 1295.59935942827 1295.5982699358601 36.743 2 0.264274342912143 0.00039635354736424893 0.00021806377773090488 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 138348 11950 YHFEEVQKL True PC9_epitope_Rep2 1191.5924235730297 1191.5907749037901 51.288 3 0.26425893686276103 0.00039635354736424893 0.00021814082786587063 ['ENSG00000140848|ENST00000290776|CPNE2'] 106398 10931 STIFYYVQK True NCI_RA007_Epitope_Rep4 1147.5913609438696 1147.59026993586 48.908 2 0.26425548025615586 0.00039635354736424893 0.00021815811910722425 ['ENSG00000092148|ENST00000399332|HECTD1'] 30104 14698 FYLEGGFSKF True NCI_RA007_Epitope_Rep5 1193.57571087973 1193.57460993586 63.206 2 0.26424877690753146 0.00039635354736424893 0.0002181916556824209 ['ENSG00000139318|ENST00000279488|DUSP6'] 1397 4302 AEEEETSIKAA True H1975_Epitope_Rep2 1176.55101225352 1176.5499099358601 21.66 2 0.26424791491698196 0.00039635354736424893 0.0002181959685601786 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000481025.1_1_6:33255909-33256589:-|nuORF'] 78209 15725 NYFLWTEKF True NCI_RA007_Epitope_Rep3 1246.60225998074 1246.60116993586 69.495 2 0.26423916549793713 0.00039635354736424893 0.0002182397501785857 ['ENSG00000100351|ENST00000344138|GRAP2'] 120343 10920 VEEEHLWEC True H1975_Epitope_Rep2 1172.48082451872 1172.4797299358602 47.034 2 0.2642061952574514 0.00039635354736424893 0.00021840481056169036 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3'] 128843 20524 VQDELHSVLGL True PC9_epitope_Rep3 1208.64010204144 1208.63900993586 84.206 2 0.26419828924158434 0.00039635354736424893 0.0002184444093893281 ['ENSG00000204560|ENST00000376442|DHX16'] 57337 8298 LEAEIATYR True NCI_RA007_Epitope_Rep2 1064.55022440788 1064.54912993586 36.916 2 0.26419564177159216 0.00039635354736424893 0.00021845767136850395 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 66076 9744 LSEINKPNFY True H1975_Epitope_Rep3 1223.61863832087 1223.61754993586 42.503 2 0.26416374839968504 0.00039635354736424893 0.0002186174983359907 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 74306 11277 NELESYAYSLK True H1975_Epitope_Rep3 1315.62959692739 1315.6284899358602 48.482 2 0.2641634505009274 0.00039635354736424893 0.00021861899174545872 ['ENSG00000044574|ENST00000324460|HSPA5'] 53399 19790 KQVEEIFNLKF True PC9_epitope_Rep2 1393.7605515272896 1393.7594499358602 81.511 2 0.2641572817717787 0.00039635354736424893 0.00021864991877230985 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 45917 6067 ISEEDELDTK True NCI_RA007_Epitope_Rep2 1177.53502783621 1177.5339299358602 28.205 2 0.26415368048372767 0.00039635354736424893 0.00021866797591666343 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 137209 19317 YAYDGKDYLAL True PC9_epitope_Rep5 1290.6132185872598 1290.6121299358601 79.347 2 0.2641448073987584 0.00039635354736424893 0.000218712472645297 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 61916 10108 LLDENLKDEY True H1975_Epitope_Rep2 1250.60304782638 1250.6019499358601 43.876 2 0.2641160493325809 0.00039635354736424893 0.0002188567508945123 ['nc|ENSG00000116984|Q99707-2|MTR', 'ENSG00000116984|ENST00000366577|MTR'] 118059 13969 TYGEIFEKF True NCI_RA007_Epitope_Rep1 1132.54407639828 1132.5429699358601 58.361 2 0.2641126294925365 0.00039635354736424893 0.00021887391445956072 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 53857 5014 KTIDMELVKRK True NCI_RA007_Epitope_Rep4 1359.7908061097498 1359.78916490379 25.77 3 0.2640965689258671 0.00039635354736424893 0.00021895453760881198 ['ENSG00000105329|ENST00000221930|TGFB1'] 131004 13754 VTDPTGFLRM True H1975_Epitope_Rep2 1135.5695799534699 1135.56848993586 58.05 2 0.2640911900845261 0.00039635354736424893 0.0002189815457430402 ['ENSG00000100154|ENST00000397906|TTC28'] 48920 13048 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69070993586 55.311 2 0.26405561282329554 0.00039635354736424893 0.00021916026966958179 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 86580 8368 QLEDGRTLSDY True H1975_Epitope_Rep2 1295.59935942827 1295.5982699358601 37.141 2 0.26401958056006797 0.00039635354736424893 0.00021934142827801517 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 44060 18868 IILEEGKEILV True PC9_epitope_Rep4 1254.7435044808199 1254.74240993586 80.662 2 0.26399179202331435 0.00039635354736424893 0.00021948124254887277 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 34491 11362 GPLQSVQVFGR True H1975_Epitope_Rep3 1186.6458561282197 1186.64474993586 48.815 2 0.2639868506826689 0.00039635354736424893 0.0002195061135859975 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 2354 5402 AEQAERYDDM True H1975_Epitope_Rep3 1226.48736645114 1226.48626993586 25.844 2 0.2639684012765604 0.00039635354736424893 0.00021959899914285213 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 96110 12554 RYMPQNPHII True PC9_epitope_Rep5 1267.6495616096697 1267.64791490379 53.288 3 0.26392389696730983 0.00039635354736424893 0.00021982322306686003 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 32259 14805 GFAFVTFDDHD True NCI_RA007_Epitope_Rep4 1269.5302172392899 1269.52912993586 64.408 2 0.26391618109634557 0.00039635354736424893 0.0002198621208941337 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 111140 19258 THFIQAGLLSA True PC9_epitope_Rep5 1156.62405805448 1156.62296993586 79.117 2 0.26386329449038415 0.00039635354736424893 0.00022012892250758556 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 137584 7088 YEEQHPELTP True H1975_Epitope_Rep2 1241.5564319871298 1241.55532993586 32.195 2 0.26384928272881997 0.00039635354736424893 0.00022019966318597526 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 3220 7576 AGELTEDEVER True PC9_epitope_Rep2 1246.5677249468197 1246.5666299358602 34.51 2 0.26384430089988276 0.00039635354736424893 0.0002202248202554589 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 2366 5589 AEQAERYDEM True H1975_Epitope_Rep2 1240.50301651528 1240.50190993586 26.5 2 0.2638394319692296 0.00039635354736424893 0.00022024940999747707 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 28525 8318 FSEEQLNRY True H1975_Epitope_Rep2 1184.5462016565998 1184.5451099358602 36.948 2 0.2638370856806469 0.00039635354736424893 0.00022026126052837234 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 118012 16945 TYDYNFHSF True PC9_epitope_Rep4 1192.48253877088 1192.4814499358602 73.169 2 0.26378125811281494 0.00039635354736424893 0.0002205434204620496 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 24949 11103 FDAGELITQR True H1975_Epitope_Rep1 1148.5825871653199 1148.5814899358602 47.672 2 0.2637234938797803 0.00039635354736424893 0.00022083574976956887 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 105296 14089 SRMDGEGQLTL True PC9_epitope_Rep5 1205.5710365054497 1205.56992993586 59.204 2 0.2636991394442364 0.00039635354736424893 0.0002209591173591111 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 7589 3066 ASFDKAKLK True NCI_RA007_Epitope_Rep5 1006.58113061334 1006.58002993586 16.984 2 0.26368722016391793 0.00039635354736424893 0.00022101951973343037 ['ENSG00000034510|ENST00000233143|TMSB10'] 130950 4602 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57362993586 22.806 2 0.2636706237154779 0.00039635354736424893 0.00022110365177055753 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 131128 9612 VTEGGEPYRLY True H1975_Epitope_Rep2 1282.61936659686 1282.61826993586 41.949 2 0.26362901875100825 0.00039635354736424893 0.00022131470003363164 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 24310 14330 EYVEKFYRI True PC9_epitope_Rep2 1245.6393737654498 1245.63826993586 60.385 2 0.26361504648648315 0.00039635354736424893 0.00022138562198704325 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 15677 7292 EATTEFSVDAR True H1975_Epitope_Rep1 1224.56224564356 1224.5611499358602 33.059 2 0.26360979732830503 0.00039635354736424893 0.0002214122721239839 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 141427 6529 YTETEPYHNY True H1975_Epitope_Rep2 1315.5356965425499 1315.5345899358601 30.027 2 0.26360082146434255 0.00039635354736424893 0.0002214578503079356 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 14287 16651 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep1 1204.6485589305998 1204.64746993586 68.888 2 0.2635783894383399 0.00039635354736424893 0.00022157179811064308 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 48940 7919 KEEELQAALAR True PC9_epitope_Rep2 1256.67246479888 1256.6708249037902 35.826 3 0.26354267293399897 0.00039635354736424893 0.00022175334822098643 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 16659 7580 EEQLQQIRAE True PC9_epitope_Rep6 1242.6204292260197 1242.6193299358602 38.43 2 0.26347739847995966 0.00039635354736424893 0.00022208552915423677 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 107273 20924 SVLDDNKLLTL True PC9_epitope_Rep1 1229.68671788069 1229.68562993586 85.305 2 0.26344560212156864 0.00039635354736424893 0.0002222475209811416 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 13783 20866 DQIAKYWEL True PC9_epitope_Rep5 1164.5815245361598 1164.5804299358601 85.313 2 0.2633917235961716 0.00039635354736424893 0.00022252228438207337 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 14192 7844 DSDYHDENM[Oxidation]YY True H1975_Epitope_Rep1 1466.4932400576602 1466.4921499358602 35.122 2 0.26337665330175686 0.00039635354736424893 0.00022259919900057516 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 96092 21457 RYMDQWVPVI True PC9_epitope_Rep1 1305.65397828377 1305.65288993586 87.375 2 0.2633432292081715 0.00039635354736424893 0.000222769881403217 ['ENSG00000116717|ENST00000370986|GADD45A', 'nc|ENSG00000116717|P24522-2|GADD45A'] 54189 2624 KVVDSLYNK True NCI_RA007_Epitope_Rep3 1064.5866099165999 1064.58550993586 14.782 2 0.2633276401629911 0.00039635354736424893 0.00022284953275525114 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 137964 15238 YFINRSWEW True NCI_RA007_Epitope_Rep4 1299.6036569630699 1299.60254993586 66.246 2 0.2632978703076144 0.00039635354736424893 0.00022300171944542708 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 9655 6555 AYEAELGDAR True NCI_RA007_Epitope_Rep2 1093.50400249145 1093.50290993586 30.111 2 0.2632543072395792 0.00039635354736424893 0.00022322460621445266 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 113803 11081 TNAENEFVTIK True PC9_epitope_Rep6 1264.6299312805597 1264.62882993586 53.543 2 0.263242329933528 0.00039635354736424893 0.00022328592620286157 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 68282 9623 LTEEKMELY True H1975_Epitope_Rep2 1154.5529268298199 1154.55182993586 41.992 2 0.2632396566987167 0.00039635354736424893 0.00022329961461644817 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 68019 11705 LTDIFQHDTY True H1975_Epitope_Rep3 1251.57716743171 1251.57606993586 50.163 2 0.26322554744449855 0.00039635354736424893 0.00022337187558910414 ['ENSG00000164366|ENST00000296824|CCDC127'] 137658 11201 YEILTPNSIPK True H1975_Epitope_Rep3 1273.69180326113 1273.69070993586 48.182 2 0.2632213658588921 0.00039635354736424893 0.00022339329620690507 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 41703 18002 IAIYELLFK True NCI_RA007_Epitope_Rep5 1108.6532329244399 1108.65212993586 76.039 2 0.2632102619456698 0.00039635354736424893 0.00022345018717490932 ['ENSG00000124614|ENST00000648437|RPS10', 'chr6:34425221-34425583|540|24.75|0.0|21.24|-|ENST00000494077|RPS10-NUDT3,RPS10'] 24211 18271 EYSDVLAKL True PC9_epitope_Rep4 1036.54407639828 1036.5429699358601 78.35 2 0.26320910015053994 0.00039635354736424893 0.00022345614047824432 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 43765 19204 IHLIDPNTL True PC9_epitope_Rep1 1034.5760452329 1034.57494993586 78.663 2 0.26320476060656367 0.00039635354736424893 0.00022347837869717018 ['ENSG00000169251|ENST00000351193|NMD3', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 113800 13216 TNAENEFVTIK True PC9_epitope_Rep3 1264.6299312805597 1264.62882993586 55.87 2 0.26319063763364714 0.00039635354736424893 0.00022355076795928998 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 142828 10212 YYSPTKNEI True PC9_epitope_Rep3 1113.53423999057 1113.5331499358601 44.232 2 0.2631666086915522 0.00039635354736424893 0.00022367398563942422 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 137208 18291 YAYDGKDYLAL True PC9_epitope_Rep4 1290.6132185872598 1290.6121299358601 78.426 2 0.2631652022132789 0.00039635354736424893 0.00022368120000762075 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 22916 9627 EVEDVVM[Oxidation]VNVR True NCI_RA007_Epitope_Rep2 1303.64420182615 1303.6431099358601 42.062 2 0.26315576161097054 0.00039635354736424893 0.00022372963052389355 ['ENSG00000134001|ENST00000256383|EIF2S1', 'ENST00000556724.1_1_14:67827147-67841270:+|nuORF'] 88872 4067 QVDQLTNDK True NCI_RA007_Epitope_Rep2 1059.51965255559 1059.5185499358602 20.458 2 0.2631509925165865 0.00039635354736424893 0.00022375410008662478 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 90570 8544 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 37.79 2 0.26312998618611344 0.00039635354736424893 0.00022386191257986238 ['ENSG00000026025|ENST00000544301|VIM'] 62013 8684 LLDQGQLNKY True H1975_Epitope_Rep1 1190.62953735774 1190.62844993586 38.333 2 0.26312450549959226 0.00039635354736424893 0.00022389005011211525 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 49884 5907 KIFVGGIKEN True NCI_RA007_Epitope_Rep3 1103.6338944621898 1103.63278993586 30.21 2 0.2630858862298519 0.00039635354736424893 0.0002240884197234888 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 29873 11128 FVTNDAATILR True NCI_RA007_Epitope_Rep2 1219.65608645875 1219.6549899358602 47.866 2 0.26306211502204074 0.00039635354736424893 0.00022421060914546058 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 139118 9576 YLDPNQRDLY True H1975_Epitope_Rep2 1295.61461556959 1295.61350993586 41.808 2 0.2630563873690244 0.00039635354736424893 0.00022424006056525594 ['ENSG00000189144|ENST00000536220|ZNF573'] 74923 14203 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69592490379 66.519 3 0.2630541509753437 0.00039635354736424893 0.0002242515610865687 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 74305 11306 NELESYAYSLK True H1975_Epitope_Rep1 1315.62959692739 1315.6284899358602 48.466 2 0.26303695538558347 0.00039635354736424893 0.000224340008126218 ['ENSG00000044574|ENST00000324460|HSPA5'] 8253 12351 ATGSWDSFLK True NCI_RA007_Epitope_Rep3 1110.53457434374 1110.53346993586 55.776 2 0.2630125113629895 0.00039635354736424893 0.00022446579828327103 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 134543 10418 VYRQDCETF True PC9_epitope_Rep1 1159.4968089360298 1159.49570993586 44.958 2 0.26300876141988616 0.00039635354736424893 0.00022448510192839757 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1'] 7762 6277 ASREEILAQAK True PC9_epitope_Rep1 1214.66190011518 1214.66026490379 28.957 3 0.26300648922047265 0.00039635354736424893 0.00022449679937675568 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 40354 5410 HQRITEEL True NCI_RA007_Epitope_Rep4 1024.53015766964 1024.5290699358602 27.38 2 0.2630055840483616 0.00039635354736424893 0.00022450145943892576 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 29018 7263 FTENDKEYQEY True H1975_Epitope_Rep3 1464.6045043783597 1464.60340993586 32.91 2 0.26298720238598056 0.00039635354736424893 0.00022459611400375842 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 140821 4927 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 24.034 2 0.26296195780183285 0.00039635354736424893 0.00022472617368010482 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 18833 14915 ELDPLTGEWHY True H1975_Epitope_Rep1 1358.61428121642 1358.6131899358602 62.608 2 0.262953950208693 0.00039635354736424893 0.00022476744442890425 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 139158 9412 YLDYDDTRY True H1975_Epitope_Rep2 1222.51423282198 1222.5131299358602 41.17 2 0.2629145292567499 0.00039635354736424893 0.00022497072885613117 ['ENSG00000184967|ENST00000330579|NOC4L', 'NOC4L|p.W207*|1|0.17|ENSG00000184967|chr12:132147896-132147896|G/-|frameshift_variant', 'ENST00000535343.5_1_12:132632219-132636084:+|nuORF'] 70044 11231 LVNELTEFAK True H1975_Epitope_Rep3 1162.6233893481399 1162.6222899358602 48.302 2 0.2629140392892399 0.00039635354736424893 0.00022497325666016063 ['CON__P02769'] 14390 11089 DTDEYVLKY True H1975_Epitope_Rep2 1144.52882025696 1144.5277299358602 47.688 2 0.26289905535661046 0.00039635354736424893 0.0002250505743978814 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1'] 135142 9429 WEIENNPTVKA True H1975_Epitope_Rep2 1299.6459156978701 1299.6448099358602 41.236 2 0.2628596768295282 0.00039635354736424893 0.00022525389624345938 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 48450 18212 IYYVDVQKF True PC9_epitope_Rep4 1173.6070110080097 1173.6059099358602 78.121 2 0.2628563827663718 0.00039635354736424893 0.0002252709127103659 ['ENSG00000160410|ENST00000291842|SHKBP1'] 22227 13836 ESYSIYVYK True PC9_epitope_Rep4 1150.55464108198 1150.55354993586 61.119 2 0.26271897964813196 0.00039635354736424893 0.00022598185809818524 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 90937 9679 REYQELMSV True NCI_RA007_Epitope_Rep3 1153.54375912845 1153.5426699358602 45.149 2 0.2626886910689814 0.00039635354736424893 0.00022613887813466003 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 133848 20484 VYGNERFIQYL True PC9_epitope_Rep1 1400.7088503075997 1400.7077499358602 83.604 2 0.2626667502748434 0.00039635354736424893 0.00022625269041103607 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 13784 18740 DQIAKYWEL True PC9_epitope_Rep6 1164.5815245361598 1164.5804299358601 84.723 2 0.26266252072320706 0.00039635354736424893 0.00022627463672921124 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 78678 10540 NYYEQWGK True PC9_epitope_Rep4 1086.47705946762 1086.4759699358601 48.271 2 0.2626130332878722 0.00039635354736424893 0.0002265315759083081 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 139117 9511 YLDPNQRDLY True H1975_Epitope_Rep1 1295.61461556959 1295.61350993586 41.505 2 0.26260577685672076 0.00039635354736424893 0.00022656927592706245 ['ENSG00000189144|ENST00000536220|ZNF573'] 2581 4610 AEQVQPPRSP True H1975_Epitope_Rep3 1107.5672714543498 1107.5661699358602 22.855 2 0.26260271377921063 0.00039635354736424893 0.00022658519170836735 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 70776 11841 LYADVGGKQF True PC9_epitope_Rep6 1096.55530978832 1096.5542099358602 56.753 2 0.26251381583053124 0.00039635354736424893 0.00022704759470078582 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 98359 7509 SEYLRYEDT True H1975_Epitope_Rep3 1174.51423282198 1174.5131299358602 33.865 2 0.262482977018286 0.00039635354736424893 0.00022720822368313092 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 53303 13229 KQLDDLKVEL True PC9_epitope_Rep6 1199.6761531969898 1199.6750499358602 62.539 2 0.2624364920875659 0.00039635354736424893 0.00022745056322308308 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 57312 7455 LEAAIAEAEER True H1975_Epitope_Rep3 1200.59863115228 1200.5975299358602 33.654 2 0.2624304314126293 0.00039635354736424893 0.0002274821783729083 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF'] 63510 9237 LLYESPERY True H1975_Epitope_Rep2 1168.57643915572 1168.57534993586 40.486 2 0.2624280804501046 0.00039635354736424893 0.00022749444321411958 ['nc|ENSG00000168394|Q03518-2|TAP1', 'ENSG00000168394|ENST00000354258|TAP1'] 24289 18321 EYTPRSWNF True PC9_epitope_Rep3 1198.54072235334 1198.5396299358601 75.68 2 0.26241094575543705 0.00039635354736424893 0.00022758385398150883 ['ENSG00000156671|ENST00000542569|SAMD8'] 43015 7769 IETIEVM[Oxidation]EDR True NCI_RA007_Epitope_Rep1 1249.58601824369 1249.5849299358601 34.209 2 0.2623925440044453 0.00039635354736424893 0.00022767991560369087 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 98647 13187 [Acetylation]-SGALDVLQM[Oxidation]K True H1975_Epitope_Rep1 1118.5641609165998 1118.56306993586 55.82 2 0.2623916321805473 0.00039635354736424893 0.00022768467660281446 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF', 'ENST00000489520.2_1_12:66152652-66152778:-|nuORF'] 34166 19123 GNFNYIEFTR True PC9_epitope_Rep1 1259.5934862021898 1259.5923899358602 78.347 2 0.2623769964588658 0.00039635354736424893 0.00022776110924132648 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 62201 4132 LLEQYKEESKK True NCI_RA007_Epitope_Rep2 1393.7452953859695 1393.74364490379 20.71 3 0.26235139918139444 0.00039635354736424893 0.0002278948486007618 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 134517 20579 VYQLRFQFL True PC9_epitope_Rep4 1212.6655289436396 1212.6644299358602 87.31 2 0.26234055113543187 0.00039635354736424893 0.0002279515506589994 ['ENSG00000068654|ENST00000263857|POLR1A'] 116320 8539 TTEESLRNYY True H1975_Epitope_Rep3 1274.5778957077 1274.57678993586 37.833 2 0.26222697054289595 0.00039635354736424893 0.00022854607880324514 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 22315 13321 ETDLLDIRSEY True H1975_Epitope_Rep3 1352.64597526752 1352.64486993586 56.499 2 0.2622180157101616 0.00039635354736424893 0.00022859301815194365 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 142136 20482 YVQDFLNHL True PC9_epitope_Rep5 1147.56620882519 1147.5651099358602 83.823 2 0.26214951539624515 0.00039635354736424893 0.00022895240209340185 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 121409 10758 VEVTEFEDIK True H1975_Epitope_Rep3 1207.59723416995 1207.59612993586 46.46 2 0.2621393973495445 0.00039635354736424893 0.00022900553395431174 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 8429 13106 [Acetylation]-ATNFLAHEK True PC9_epitope_Rep1 1071.53490901321 1071.53380993586 55.279 2 0.2621362512398481 0.00039635354736424893 0.00022902205731536519 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 66233 5289 LSEVNRTGTQY True H1975_Epitope_Rep3 1266.62042922602 1266.6193299358602 25.426 2 0.262110571666094 0.00039635354736424893 0.00022915697105542124 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 67986 15669 LTDFDIRFY True H1975_Epitope_Rep2 1188.5815245361598 1188.5804299358601 65.428 2 0.2620523235639522 0.00039635354736424893 0.00022946328654424583 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 108519 17731 SYMLVNENRF True PC9_epitope_Rep3 1271.5968573304701 1271.59576993586 73.399 2 0.2620301242186108 0.00039635354736424893 0.00022958013654883467 ['ENSG00000182195|ENST00000370526|LDOC1'] 38403 7060 HEMFPAVHAA True H1975_Epitope_Rep3 1108.5123994305197 1108.51130993586 32.121 2 0.26199395861713115 0.00039635354736424893 0.0002297706280029093 ['ENSG00000113638|ENST00000337702|TTC33'] 54540 5942 KYINTDAKF True NCI_RA007_Epitope_Rep3 1098.5709598524597 1098.5698699358602 30.353 2 0.26194340298915464 0.00039635354736424893 0.00023003718006717799 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 2350 5198 AEQAERYDDM True H1975_Epitope_Rep2 1226.48736645114 1226.48626993586 25.065 2 0.26194180417989743 0.00039635354736424893 0.000230045614762765 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 14977 22862 DYFFKPVLF True PC9_epitope_Rep5 1174.60628273202 1174.6051899358602 92.936 2 0.26193958257363487 0.00039635354736424893 0.00023005733560751312 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 18075 6504 EIGQSVDEVEK True NCI_RA007_Epitope_Rep2 1231.5932114186696 1231.5921099358602 29.908 2 0.2619227706178188 0.00039635354736424893 0.00023014605223822923 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 74918 15003 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69592490379 65.648 3 0.2618888838293487 0.00039635354736424893 0.00023032497689788218 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 22375 15909 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69076993586 66.395 2 0.2618601460119156 0.00039635354736424893 0.00023047682384179575 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 134218 21070 VYMDWYEKF True PC9_epitope_Rep1 1279.5583465634297 1279.55724993586 85.878 2 0.2618350776541625 0.00039635354736424893 0.00023060936374325392 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 64836 8766 LQDGEFSM[Oxidation]DLR True H1975_Epitope_Rep1 1325.59216625329 1325.59106993586 38.648 2 0.26182536104551524 0.00039635354736424893 0.00023066075734318149 ['ENSG00000108518|ENST00000225655|PFN1'] 77582 10993 NTDPWAGYRY True H1975_Epitope_Rep2 1241.5465360097699 1241.54542993586 47.311 2 0.2617952446068944 0.00039635354736424893 0.00023082012372529565 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 53299 15501 KQLDDLKVEL True PC9_epitope_Rep5 1199.6761531969898 1199.6745149037902 64.634 3 0.26178664852523187 0.00039635354736424893 0.00023086563162549393 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 139128 11415 YLDPVQRDLY True H1975_Epitope_Rep2 1280.64010204144 1280.63900993586 48.958 2 0.26178001102174403 0.00039635354736424893 0.00023090077690818107 ['ENST00000467680.5_1_7:99159903-99161679:+|nuORF', 'nc|ENSG00000197343|Q8N720-2|ZNF655'] 44839 10328 INEILSNALK True H1975_Epitope_Rep1 1113.63937376545 1113.63826993586 44.675 2 0.2617696877167112 0.00039635354736424893 0.00023095544899769368 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 97178 10136 SDVEAIFSK True NCI_RA007_Epitope_Rep2 994.49712620586 994.49602993586 44.015 2 0.26176019769667325 0.00039635354736424893 0.000231005719463447 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 2352 5395 AEQAERYDDM True H1975_Epitope_Rep2 1226.48736645114 1226.48626993586 25.786 2 0.2617399090934041 0.00039635354736424893 0.00023111322888523067 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 41515 20421 HYNSDLNNLLF True PC9_epitope_Rep2 1348.6411646706 1348.64006993586 83.976 2 0.2617211869911264 0.00039635354736424893 0.00023121248188707019 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 28960 5446 FTDTSYEEKRY True H1975_Epitope_Rep2 1437.6412242402498 1437.6395849037901 25.975 3 0.2616909272897559 0.00039635354736424893 0.00023137299040976156 ['ENSG00000134202|ENST00000361066|GSTM3', 'ENST00000488824.1_1_1:110279695-110282569:-|nuORF'] 117978 7857 TYDKGYQF True NCI_RA007_Epitope_Rep5 1020.45526139388 1020.45416993586 36.918 2 0.26167721304496405 0.00039635354736424893 0.00023144577254269135 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 119415 14840 VAQLEQVYIR True PC9_epitope_Rep1 1217.6768219033297 1217.67572993586 61.902 2 0.26166072943807483 0.00039635354736424893 0.00023153328216668018 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 77292 8812 NSDLSEKLEY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 38.902 2 0.2616581138337178 0.00039635354736424893 0.0002315471711649402 ['ENSG00000117724|ENST00000366955|CENPF'] 69631 14834 LVDPWTPHLY True H1975_Epitope_Rep2 1239.62880908175 1239.6277099358601 62.215 2 0.2616503905854999 0.00039635354736424893 0.00023158818689588128 ['ENSG00000010292|ENST00000315579|NCAPD2'] 67861 20281 LTAPEDVFSKL True PC9_epitope_Rep2 1218.6496040959798 1218.6485099358601 83.432 2 0.26164218795656585 0.00039635354736424893 0.000231631756438249 ['ENSG00000155561|ENST00000285968|NUP205'] 41425 19734 HYIDAGYLGF True PC9_epitope_Rep4 1154.53965972418 1154.53856993586 84.031 2 0.2616251530092714 0.00039635354736424893 0.00023172226645901229 ['ENSG00000115207|ENST00000264720|GTF3C2'] 14755 22023 DVNFEFPEFQL True NCI_RA007_Epitope_Rep2 1383.63468230783 1383.63358993586 91.349 2 0.26161286362809105 0.00039635354736424893 0.00023178758435885263 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 27486 8246 FMEKETPLRY True H1975_Epitope_Rep2 1312.6485585501598 1312.64746993586 36.671 2 0.261603965113588 0.00039635354736424893 0.000231834891362047 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 134019 8668 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5287299358602 40.831 2 0.2615617825521698 0.00039635354736424893 0.00023205927737612718 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 26109 4652 FGSDQSENVDR True NCI_RA007_Epitope_Rep2 1252.53200814444 1252.53090993586 22.722 2 0.26152368607818666 0.00039635354736424893 0.00023226211485776244 ['nc|ENSG00000130770|Q9UII2-2|ATP5IF1', 'nc|ENSG00000130770|Q9UII2-3|ATP5IF1', 'ENSG00000130770|ENST00000335514|ATP5IF1'] 92853 11942 RPFEDQTSL True PC9_epitope_Rep1 1091.52473793603 1091.52364993586 50.8 2 0.26151407457276615 0.00039635354736424893 0.00023231331756166685 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 40955 13362 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.5240299358602 56.529 2 0.2615089833772085 0.00039635354736424893 0.00023234044411561713 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 70310 7643 LVSESSDVLPK True H1975_Epitope_Rep1 1172.6288686514001 1172.6277699358602 34.381 2 0.2614899113438247 0.00039635354736424893 0.00023244209061457313 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 22293 7809 ETDHINQIGY True H1975_Epitope_Rep3 1188.54111627616 1188.54000993586 35.02 2 0.26148457119067403 0.00039635354736424893 0.00023247055953208188 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 59733 8102 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1269.55471811541 1269.55362993586 36.147 2 0.2614730481954665 0.00039635354736424893 0.00023253200173414422 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 103146 10920 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 47.326 2 0.26144343622195604 0.00039635354736424893 0.00023268997151549653 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 21947 10364 ESEDPDYYQY True H1975_Epitope_Rep3 1307.48299226335 1307.4818899358602 44.919 2 0.2613867352985344 0.00039635354736424893 0.00023299275175520795 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 54372 12973 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.53333490379 54.929 3 0.2613765680880114 0.00039635354736424893 0.00023304708590334046 ['ENSG00000123975|ENST00000314355|CKS2'] 10127 8433 AYVHMVTHF True NCI_RA007_Epitope_Rep3 1103.52223583823 1103.52112993586 40.257 2 0.2613384700844254 0.00039635354736424893 0.00023325079673743433 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 138822 19101 YIYDKDMEII True PC9_epitope_Rep4 1301.6213407428097 1301.62024993586 81.564 2 0.26131210792953746 0.00039635354736424893 0.00023339186017854702 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 63331 6481 LLTEPPM[Oxidation]NPTK True H1975_Epitope_Rep1 1255.6482245774298 1255.6471299358602 29.99 2 0.2613051247414195 0.00039635354736424893 0.00023342924141824694 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083141-25083279:+|nuORF', 'ACTR2|p.E121Rfs*3|1|0.07|ENSG00000138071|chr2:65246722-65246725|AGAG/-|frameshift_variant'] 926 7777 [Acetylation]-ADM[Oxidation]QNLVER True H1975_Epitope_Rep3 1132.51827335334 1132.51716993586 34.899 2 0.2613013058608179 0.00039635354736424893 0.00023344968655135935 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1'] 95697 21552 RYFLPPYTF True PC9_epitope_Rep1 1202.6124307416196 1202.61132993586 87.721 2 0.2612753027024685 0.00039635354736424893 0.00023358894731938885 ['ENSG00000023608|ENST00000216294|SNAPC1'] 21526 11343 ERMPEQIRL True PC9_epitope_Rep2 1170.61792712822 1170.61627490379 48.95 3 0.26126118053036634 0.00039635354736424893 0.0002336646139529884 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 49379 6806 KESYSVYVYK True NCI_RA007_Epitope_Rep4 1264.6339540318397 1264.63231490379 32.804 3 0.2612496341054222 0.00039635354736424893 0.00023372649797613702 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 119418 13538 VAQLEQVYIR True PC9_epitope_Rep4 1217.6768219033297 1217.67572993586 59.97 2 0.2612227410910604 0.00039635354736424893 0.00023387069699730607 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 10143 11154 AYVHMVTHF True PC9_epitope_Rep6 1103.52223583823 1103.52112993586 53.857 2 0.26120313094086867 0.00039635354736424893 0.0002339759018578508 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 10995 11429 DALNIETAIK True NCI_RA007_Epitope_Rep2 1086.5920892198599 1086.59098993586 49.048 2 0.2611884721547105 0.00039635354736424893 0.00023405457453008337 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 23639 21819 EWSPYTKIFQF True PC9_epitope_Rep2 1444.7027022979998 1444.70160993586 89.4 2 0.26117620668705094 0.00039635354736424893 0.00023412042279883833 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 11041 11254 DASVNFSEFSK True NCI_RA007_Epitope_Rep2 1229.5564319871298 1229.55532993586 48.362 2 0.2611650799542847 0.00039635354736424893 0.00023418017372467116 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000559968.1_1_14:68082236-68082464:+|nuORF'] 54924 16395 KYPSPFFVF True NCI_RA007_Epitope_Rep3 1130.5800679841798 1130.5789699358602 72.221 2 0.26115392553270367 0.00039635354736424893 0.00023424008867780176 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 107668 5154 SVQSDQGYISR True NCI_RA007_Epitope_Rep3 1238.58912909774 1238.58802993586 27.266 2 0.2611376880265547 0.00039635354736424893 0.0002343273344098765 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 29048 9101 FTETELKTTDY True H1975_Epitope_Rep2 1346.6241771937798 1346.6230899358602 39.959 2 0.26111737586472944 0.00039635354736424893 0.00023443651951669768 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 8025 12094 ATDLVVLDRY True H1975_Epitope_Rep2 1163.6186383208699 1163.61754993586 51.602 2 0.2611136653361479 0.00039635354736424893 0.00023445647043599633 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'ENST00000529206.1_1_14:95595738-95599795:-|nuORF'] 139501 4975 YLSEVASGDNK True H1975_Epitope_Rep3 1181.5564319871298 1181.55532993586 24.264 2 0.2611067771257908 0.00039635354736424893 0.000234493511753268 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion'] 22301 9705 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 42.314 2 0.2611027321992623 0.00039635354736424893 0.00023451526605849395 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 61391 8370 LITLEEEM[Oxidation]TK True NCI_RA007_Epitope_Rep2 1221.61625574281 1221.61514993586 37.198 2 0.2610999634945196 0.00039635354736424893 0.00023453015779099362 ['ENSG00000185624|ENST00000331483|P4HB'] 116860 11833 TVEVDLFTSK True NCI_RA007_Epitope_Rep1 1137.59175486669 1137.59064993586 50.008 2 0.26108422228825373 0.00039635354736424893 0.0002346148413229123 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF'] 103153 10364 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 47.565 2 0.26106153175464375 0.00039635354736424893 0.00023473696431870587 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 57333 7756 LEAEIATYR True H1975_Epitope_Rep1 1064.55022440788 1064.54912993586 34.791 2 0.2610550931164865 0.00039635354736424893 0.0002347716293915406 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 77395 14083 NSFVNDIFER True NCI_RA007_Epitope_Rep1 1239.5884008217497 1239.58730993586 58.809 2 0.2610364267601518 0.00039635354736424893 0.00023487215644054152 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 22384 11998 ETEEGIYWRY True H1975_Epitope_Rep1 1344.5986311522797 1344.5975299358602 51.158 2 0.261034971716266 0.00039635354736424893 0.0002348799943435022 ['nc|ENSG00000131650|Q8NCW0-6|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-4|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-3|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-5|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-2|KREMEN2', 'ENSG00000131650|ENST00000303746|KREMEN2'] 133988 6698 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5287299358602 33.429 2 0.261028864334441 0.00039635354736424893 0.00023491289591191629 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 2373 7648 AEQDELSQRLA True H1975_Epitope_Rep2 1258.61534384558 1258.61424993586 34.372 2 0.2610218621119581 0.00039635354736424893 0.00023495062383128493 ['ENSG00000255112|ENST00000526991|CHMP1B'] 96093 21375 RYMDQWVPVI True PC9_epitope_Rep5 1305.65397828377 1305.65288993586 87.28 2 0.26099365682473546 0.00039635354736424893 0.00023510265519083526 ['ENSG00000116717|ENST00000370986|GADD45A', 'nc|ENSG00000116717|P24522-2|GADD45A'] 116287 13332 TTDLFGRDLSY True H1975_Epitope_Rep2 1286.6142812164198 1286.6131899358602 56.414 2 0.26098858625731175 0.00039635354736424893 0.00023512999687508619 ['ENSG00000169813|ENST00000682386|HNRNPF'] 121767 21250 VFNDVRLLL True PC9_epitope_Rep5 1087.6389798426299 1087.6378899358601 86.788 2 0.2609636470262007 0.00039635354736424893 0.00023526452141809482 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 11664 13469 DGQFSVLFTK True H1975_Epitope_Rep1 1140.5815245361598 1140.5804299358601 56.925 2 0.2609608728085347 0.00039635354736424893 0.00023527949057330425 ['CON__P12763'] 65795 12688 LSDIGSGIRYL True H1975_Epitope_Rep2 1192.6451874218799 1192.6440899358602 53.905 2 0.26095382317846394 0.00039635354736424893 0.00023531753334150014 ['ENSG00000213341|ENST00000370397|CHUK'] 12886 12863 DLINNLGTIAK True H1975_Epitope_Rep1 1170.66083748602 1170.6597499358602 54.546 2 0.260934970471605 0.00039635354736424893 0.00023541930076085584 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 34175 17474 GNFNYVEFTR True PC9_epitope_Rep1 1245.5778361380499 1245.5767299358602 72.01 2 0.26091742320765465 0.00039635354736424893 0.00023551406099023254 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 75912 9020 NLQYYDISAK True H1975_Epitope_Rep1 1213.5979028762902 1213.5968099358602 39.602 2 0.2608951877389407 0.00039635354736424893 0.00023563419376661799 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 53295 14015 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6745149037902 61.821 3 0.2608884380501422 0.00039635354736424893 0.00023567067282478002 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 69564 9782 LVDEPQNLIK True NCI_RA007_Epitope_Rep1 1167.6499384491499 1167.6488499358602 42.052 2 0.2608596434409542 0.00039635354736424893 0.00023582635842376865 ['CON__P02769'] 69303 4556 LTVAENEAETK True H1975_Epitope_Rep3 1203.5982967991097 1203.5971899358601 22.645 2 0.2608575477219816 0.00039635354736424893 0.00023583769349998292 ['ENSG00000136628|ENST00000366923|EPRS1'] 28463 5115 FSDNQLQEGK True H1975_Epitope_Rep3 1164.54111627616 1164.54000993586 24.785 2 0.2608535421012097 0.00039635354736424893 0.00023585936014550196 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 88580 6165 QTDLHEHPLY True H1975_Epitope_Rep2 1251.58840082175 1251.58730993586 28.686 2 0.2608237917466927 0.00039635354736424893 0.00023602034404982084 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 43520 9692 IGNLNTLVVK True H1975_Epitope_Rep1 1069.64954452633 1069.64844993586 42.205 2 0.2608045169325568 0.00039635354736424893 0.00023612470190845735 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 1395 14328 AEEEDFLRLP True H1975_Epitope_Rep2 1217.5928174958499 1217.59172993586 60.262 2 0.26078610718674783 0.00039635354736424893 0.00023622441927776005 ['ENSG00000167487|ENST00000300976|KLHL26'] 24883 20588 FAYDGKDYLTL True PC9_epitope_Rep1 1304.6288686513997 1304.6277699358602 84.006 2 0.260784655071964 0.00039635354736424893 0.0002362322865301478 ['ENSG00000204592|ENST00000376630|HLA-E'] 62321 11409 LLGELLQDNAK True H1975_Epitope_Rep3 1212.67140216972 1212.6703099358601 49.001 2 0.2607817863059747 0.00039635354736424893 0.00023624782967242462 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 44783 20172 IMLEALERV True PC9_epitope_Rep1 1072.59506642532 1072.59396993586 82.42 2 0.26077394464801235 0.00039635354736424893 0.00023629032146414952 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 96805 7622 SAQSFFENK True NCI_RA007_Epitope_Rep4 1056.48762415132 1056.48652993586 35.971 2 0.2607701815423733 0.00039635354736424893 0.00023631071541982025 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 17593 8240 EHINEGETAM[Oxidation]L True PC9_epitope_Rep4 1258.5499670881397 1258.54886993586 39.156 2 0.2607679736202724 0.00039635354736424893 0.0002363226819600543 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 134688 11228 VYTGIDHHW True PC9_epitope_Rep5 1126.51959298594 1126.51795490379 48.178 3 0.2607405059449189 0.00039635354736424893 0.00023647160259012497 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 34167 18430 GNFNYIEFTR True PC9_epitope_Rep2 1259.5934862021898 1259.5923899358602 76.223 2 0.26073908594895706 0.00039635354736424893 0.00023647930389334476 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 68016 11757 LTDIFQHDTY True H1975_Epitope_Rep2 1251.57716743171 1251.57606993586 50.299 2 0.2607325348685748 0.00039635354736424893 0.00023651483672525154 ['ENSG00000164366|ENST00000296824|CCDC127'] 120645 6132 VEILANDQGNR True NCI_RA007_Epitope_Rep1 1227.6207635791898 1227.6196699358602 27.889 2 0.26072005090931555 0.00039635354736424893 0.00023658256409814257 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 56621 10028 LDIDSPPITAR True H1975_Epitope_Rep3 1196.6401020414398 1196.63900993586 43.608 2 0.26063965452914944 0.00039635354736424893 0.00023701919247422725 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 70016 5893 LVM[Oxidation]EEAPESYK True H1975_Epitope_Rep1 1310.6064193350996 1310.60532993586 27.737 2 0.2606288504743043 0.00039635354736424893 0.0002370779302251282 ['ENSG00000100220|ENST00000216038|RTCB'] 5835 13039 APFDLFENK True H1975_Epitope_Rep3 1079.52876068731 1079.52766993586 55.394 2 0.26060167089166947 0.00039635354736424893 0.00023722576032794688 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 92337 9589 RLNDFASTVR True PC9_epitope_Rep5 1177.62036965637 1177.61872490379 41.845 3 0.26059873330471767 0.00039635354736424893 0.00023724174343168577 ['ENSG00000178741|ENST00000322347|COX5A'] 31361 6981 [Acetylation]-GDREQLLQR True NCI_RA007_Epitope_Rep2 1155.5996345280898 1155.5985299358601 31.777 2 0.26057710683069873 0.00039635354736424893 0.00023735944403711394 ['ENSG00000128245|ENST00000248975|YWHAH'] 121334 7664 VEVEGDNRYIA True H1975_Epitope_Rep2 1263.6095301891498 1263.6084299358602 34.434 2 0.2605266741811436 0.00039635354736424893 0.00023763414766519232 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 78393 20535 NYLHLDYNF True PC9_epitope_Rep3 1197.5454733806098 1197.54436993586 84.251 2 0.26051864908412364 0.00039635354736424893 0.00023767788925992302 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 125944 10514 VLDELTLAR True H1975_Epitope_Rep1 1028.5866099165999 1028.58550993586 45.394 2 0.2605121654948676 0.00039635354736424893 0.00023771323460456328 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 134318 16108 VYNSEYYHF True PC9_epitope_Rep5 1220.5138388991602 1220.51274993586 66.949 2 0.2605068434634862 0.00039635354736424893 0.00023774225164226417 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 14849 8306 DVVQAYPEVR True H1975_Epitope_Rep1 1174.5982372294598 1174.5971499358602 36.881 2 0.2604953303675614 0.00039635354736424893 0.00023780503604733802 ['ENSG00000135829|ENST00000367549|DHX9'] 77583 11086 NTDPWAGYRY True H1975_Epitope_Rep2 1241.5465360097699 1241.54542993586 47.677 2 0.2604913934873817 0.00039635354736424893 0.0002378265088612238 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 15343 5196 EAGEQGDIEPR True PC9_epitope_Rep5 1199.5418445521498 1199.54074993586 25.003 2 0.2604899993268083 0.00039635354736424893 0.00023783411345753024 ['ENSG00000145907|ENST00000356245|G3BP1'] 109472 16962 TDLLLEPYNK True PC9_epitope_Rep3 1204.6339540318397 1204.6328499358601 70.406 2 0.2604852674230128 0.00039635354736424893 0.0002378599259443018 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 85383 4695 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 23.153 2 0.26046896925382934 0.00039635354736424893 0.0002379488537785485 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 7767 6296 ASREEILAQAK True PC9_epitope_Rep5 1214.66190011518 1214.66026490379 29.193 3 0.2604492713401914 0.00039635354736424893 0.00023805637613269487 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 20062 10000 EMEAELEDER True PC9_epitope_Rep1 1249.5132468458098 1249.5121499358602 43.331 2 0.2604444436153843 0.00039635354736424893 0.00023808273601305633 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 54488 19749 KYIDFDHVF True PC9_epitope_Rep1 1182.57095985246 1182.5693249037902 80.791 3 0.26039067727457255 0.00039635354736424893 0.00023837650358551768 ['ENSG00000007545|ENST00000397412|CRAMP1'] 54025 13372 KVIDDTNITRL True PC9_epitope_Rep3 1286.7194149913 1286.71777490379 56.468 3 0.2603866558311565 0.00039635354736424893 0.00023839849047044173 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 48009 13414 IYLEKLKTI True PC9_epitope_Rep4 1119.69034670915 1119.68924993586 59.498 2 0.2603829817810221 0.00039635354736424893 0.00023841857978987072 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 139504 5570 YLSEVASGDNK True NCI_RA007_Epitope_Rep2 1181.5564319871298 1181.55532993586 26.281 2 0.26037432578108555 0.00039635354736424893 0.00023846591659309332 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion'] 7189 11649 AQYEHDLEV True PC9_epitope_Rep5 1102.4931034545798 1102.49200993586 49.803 2 0.2603267393108852 0.00039635354736424893 0.00023872631952955812 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 114159 7453 TPKMPGQSV True PC9_epitope_Rep3 943.47970231991 943.47860993586 33.672 2 0.2602676846327827 0.00039635354736424893 0.0002390498751212332 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 111223 5830 THISSQNSEL True PC9_epitope_Rep5 1114.52546621202 1114.52436993586 27.418 2 0.26026516994698445 0.00039635354736424893 0.00023906366262262913 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 118531 8308 TYQEVAQKF True NCI_RA007_Epitope_Rep2 1112.5502244078798 1112.54912993586 36.955 2 0.2602592489119927 0.00039635354736424893 0.00023909612957829458 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 74835 5159 NHEEEISTLR True NCI_RA007_Epitope_Rep2 1226.58912909774 1226.58802993586 24.686 2 0.260258693470033 0.00039635354736424893 0.00023909917547342344 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 68441 5028 LTEVNKTGTQY True H1975_Epitope_Rep3 1252.62993128056 1252.62882993586 24.461 2 0.2602523113010303 0.00039635354736424893 0.00023913417637132483 ['ENSG00000124570|ENST00000380539|SERPINB6'] 11529 11620 DFM[Oxidation]IQGGDFTR True NCI_RA007_Epitope_Rep2 1301.5710368858895 1301.56992993586 49.79 2 0.26024883737772236 0.00039635354736424893 0.00023915323011419002 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 142694 10760 YYPTEDVPR True PC9_epitope_Rep5 1138.5294889632999 1138.52838993586 46.381 2 0.2602102256347911 0.00039635354736424893 0.00023936510990188502 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 129131 16129 VQQTVQDLFGR True PC9_epitope_Rep2 1289.67279915205 1289.67170993586 67.297 2 0.26018277290285 0.00039635354736424893 0.0002395158696460138 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 16075 8226 EEAENTLQSFR True H1975_Epitope_Rep1 1322.61025846514 1322.60916993586 36.585 2 0.2601729351385829 0.00039635354736424893 0.000239569917982649 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 108731 5310 SYRQSSATSSF True NCI_RA007_Epitope_Rep4 1219.5469299325898 1219.5458299358602 26.983 2 0.2601528354644866 0.00039635354736424893 0.00023968038289398888 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 140959 11654 YSFDNLPEKY True H1975_Epitope_Rep2 1274.58191845898 1274.58082993586 49.897 2 0.2601407696655371 0.00039635354736424893 0.00023974671930067574 ['ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-2|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 25473 8029 FEEM[Oxidation]IQQIK True NCI_RA007_Epitope_Rep2 1180.57981066444 1180.5787099358602 35.863 2 0.26009579654119064 0.00039635354736424893 0.00023999413861616674 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 17518 8278 EHFQDDVFNEK True NCI_RA007_Epitope_Rep1 1406.6102584651396 1406.60916993586 36.199 2 0.26003879160221277 0.00039635354736424893 0.00024030811861495128 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 66239 11166 LSEWQKELY True H1975_Epitope_Rep2 1194.5920892198599 1194.59098993586 47.987 2 0.260016352153313 0.00039635354736424893 0.0002404318267175984 ['ENSG00000196453|ENST00000247930|ZNF777'] 57777 7582 LEEQSRLIAA True H1975_Epitope_Rep3 1128.6138872935999 1128.61278993586 34.145 2 0.25999892615800546 0.00039635354736424893 0.0002405279398008428 ['ENSG00000157500|ENST00000288266|APPL1'] 110009 6920 TEISEMNRNIS True H1975_Epitope_Rep2 1292.60306490972 1292.60196993586 31.539 2 0.25997565998054895 0.00039635354736424893 0.00024065632443287833 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF'] 31760 6614 GEHSYTGIIHA True H1975_Epitope_Rep2 1183.56218607391 1183.56108993586 30.349 2 0.2599413955457858 0.00039635354736424893 0.00024084552337582022 ['ENSG00000122912|ENST00000609923|SLC25A16'] 49971 14732 KIQEILTQV True PC9_epitope_Rep4 1070.63356010902 1070.6324699358602 64.6 2 0.25993285815342404 0.00039635354736424893 0.00024089268773952677 ['ENSG00000136231|ENST00000258729|IGF2BP3', 'nc|ENSG00000136231|O00425-2|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 137559 7281 YEELQVTAGR True H1975_Epitope_Rep3 1164.5775017848798 1164.57640993586 32.981 2 0.2599189423876268 0.00039635354736424893 0.0002409695844762687 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 34493 11517 GPLQSVQVFGR True NCI_RA007_Epitope_Rep5 1186.6458561282197 1186.64474993586 50.95 2 0.25985552206506873 0.00039635354736424893 0.0002413203486693179 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 11934 16097 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.5480899358602 69.853 2 0.2598509501893644 0.00039635354736424893 0.00024134565449551084 ['ENSG00000273749|ENST00000617928|CYFIP1'] 14354 4404 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 23.386 2 0.25984825669918543 0.00039635354736424893 0.00024136056449960522 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 125936 7019 VLDEADEM[Oxidation]LSR True H1975_Epitope_Rep1 1292.59183190012 1292.59072993586 32.034 2 0.25981058649309363 0.00039635354736424893 0.00024156918732626002 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 110113 3864 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 19.899 2 0.2597330774543888 0.00039635354736424893 0.00024199901172937866 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 47736 18728 IYDSVKVYF True PC9_epitope_Rep4 1132.5804619069997 1132.57936993586 80.119 2 0.25972904891569815 0.00039635354736424893 0.000242021372828419 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 96139 5287 RYPDNLKHL True NCI_RA007_Epitope_Rep4 1154.61964138038 1154.61799490379 26.887 3 0.2597155636327646 0.00039635354736424893 0.0002420962402851683 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 12414 8321 DITSDTSGDFR True NCI_RA007_Epitope_Rep2 1212.5258601348398 1212.5247699358601 37.007 2 0.2597076715696142 0.00039635354736424893 0.0002421400661263538 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 137748 8249 YENEVALRQ True PC9_epitope_Rep3 1120.5512870370399 1120.55018993586 36.706 2 0.2597040884697823 0.00039635354736424893 0.00024215996625521355 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 120131 8027 VEAFQTTISK True NCI_RA007_Epitope_Rep1 1122.5920892198599 1122.59098993586 35.219 2 0.25970170228279665 0.00039635354736424893 0.0002421732197754302 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000559359.1_1_14:24613399-24613677:-|nuORF', 'ENST00000453033.1_1_13:49345602-49345743:+|nuORF'] 68213 12867 LTDYFLKDEY True H1975_Epitope_Rep2 1305.61288423409 1305.61178993586 54.605 2 0.25967752258141136 0.00039635354736424893 0.00024230756130821048 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF', 'USP4|p.K811Sfs*32|1|0.71|ENSG00000114316|chr3:49284095-49284095|T/-|frameshift_variant'] 87517 21296 QQHSILLLL True PC9_epitope_Rep1 1063.6389798426299 1063.6378899358601 86.743 2 0.25963124634520296 0.00039635354736424893 0.00024256487864690287 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 120070 11327 VDTFLEDVK True NCI_RA007_Epitope_Rep1 1064.5389910178399 1064.5378899358602 48.03 2 0.2596194127995032 0.00039635354736424893 0.0002426307226031946 ['CON__P34955'] 70331 10229 LVSESSDVLPK True PC9_epitope_Rep4 1172.6288686514001 1172.6277699358602 47.024 2 0.25961289245541513 0.00039635354736424893 0.00024266701061238688 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 7499 6975 ASDKETYELRY True H1975_Epitope_Rep3 1373.64630962069 1373.64466490379 31.791 3 0.2596003926146962 0.00039635354736424893 0.00024273659183209005 ['ENSG00000163584|ENST00000295830|RPL22L1'] 12505 7263 DKGEYTLVVK True NCI_RA007_Epitope_Rep1 1150.6233893481399 1150.6217549037901 32.242 3 0.2594952087804125 0.00039635354736424893 0.00024332289739932358 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 95410 19098 RWFDKSFTF True PC9_epitope_Rep4 1232.59784330664 1232.59674993586 81.551 2 0.2594667520049336 0.00039635354736424893 0.00024348176217371974 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 18678 13138 ELAEQTLNNIK True PC9_epitope_Rep5 1271.6721304457099 1271.6710299358601 55.539 2 0.2594253146005519 0.00039635354736424893 0.00024371327940472893 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 46034 13356 ISGLIYEETR True PC9_epitope_Rep2 1179.6135529404298 1179.61244993586 56.648 2 0.2593818292306506 0.00039635354736424893 0.00024395647617349018 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 106452 19472 STIRLLTSL True PC9_epitope_Rep2 1002.60734536118 1002.60624993586 80.279 2 0.2593774672004063 0.00039635354736424893 0.00024398088472996025 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 108565 19491 SYNNFFRMF True PC9_epitope_Rep6 1224.53861417836 1224.53750993586 87.634 2 0.25937641140340467 0.00039635354736424893 0.00024398679300750376 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 32341 15109 GFGFVTFDDHD True NCI_RA007_Epitope_Rep2 1255.51456717515 1255.51346993586 63.46 2 0.2593666471755949 0.00039635354736424893 0.00024404144076837163 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 26950 10768 FLDSTGSRLDY True H1975_Epitope_Rep2 1272.59863115228 1272.5975299358602 46.449 2 0.2593644625064281 0.00039635354736424893 0.00024405366945412548 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 24316 13655 EYVEKFYRI True PC9_epitope_Rep4 1245.6393737654498 1245.63826993586 60.415 2 0.25935831100540746 0.00039635354736424893 0.00024408810578030294 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 37827 10829 GYIERPQLI True NCI_RA007_Epitope_Rep5 1087.6025943339098 1087.6014899358602 48.287 2 0.25934184756417633 0.00039635354736424893 0.0002441802926791129 ['nc|ENSG00000164329|Q6PIY7-2|TENT2', 'ENSG00000164329|ENST00000453514|TENT2'] 68017 11846 LTDIFQHDTY True H1975_Epitope_Rep2 1251.57716743171 1251.57606993586 50.644 2 0.2593336035133194 0.00039635354736424893 0.000244226468281034 ['ENSG00000164366|ENST00000296824|CCDC127'] 17855 5711 EHVKEVQQL True PC9_epitope_Rep3 1108.58767254576 1108.58656993586 27.041 2 0.2592998217812837 0.00039635354736424893 0.00024441577393318777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 68433 5163 LTEVNKAGTQY True H1975_Epitope_Rep3 1222.61936659686 1222.61826993586 24.96 2 0.2592876206782096 0.00039635354736424893 0.0002444841824635168 ['ENSG00000170542|ENST00000380698|SERPINB9'] 138570 5583 YIDENQDRY True H1975_Epitope_Rep3 1214.52038083158 1214.5192899358601 26.515 2 0.2592614397862972 0.00039635354736424893 0.0002446310369355524 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 95284 3814 RVPVEKPVYK True NCI_RA007_Epitope_Rep4 1213.7182927924898 1213.71664490379 20.855 3 0.2592559211841738 0.00039635354736424893 0.0002446620032865592 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 13889 7180 DQVANSAFVER True H1975_Epitope_Rep3 1234.59421447818 1234.5931099358602 32.593 2 0.25924556671493065 0.00039635354736424893 0.00024472011558011224 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 134269 18294 VYNEQIRDLL True PC9_epitope_Rep4 1261.6666511424498 1261.66554993586 78.437 2 0.2592025087125833 0.00039635354736424893 0.00024496191800794 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF'] 66223 2727 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 14.57 2 0.25919008405332966 0.00039635354736424893 0.00024503173613164364 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 107651 9959 SVQGIILYR True NCI_RA007_Epitope_Rep5 1047.6076797143498 1047.60658993586 44.949 2 0.25915497679459804 0.00039635354736424893 0.00024522912281804335 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 137046 13920 YALYDATYETK True PC9_epitope_Rep2 1336.61869789052 1336.6176099358602 58.823 2 0.2591495691428787 0.00039635354736424893 0.0002452595409020671 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 108520 16015 SYMLVNENRF True PC9_epitope_Rep4 1271.5968573304701 1271.59576993586 69.535 2 0.259148551512212 0.00039635354736424893 0.0002452652655053834 ['ENSG00000182195|ENST00000370526|LDOC1'] 70052 17524 LVNELTEFAK True PC9_epitope_Rep1 1162.6233893481399 1162.6222899358602 72.2 2 0.259127189120651 0.00039635354736424893 0.0002453854689159364 ['CON__P02769'] 34173 16705 GNFNYIEFTR True PC9_epitope_Rep6 1259.5934862021898 1259.5923899358602 76.731 2 0.2591258727849299 0.00039635354736424893 0.0002453928776972426 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 60993 9328 LIEEVM[Oxidation]IGEDK True H1975_Epitope_Rep1 1290.6377194633799 1290.6366299358601 40.787 2 0.2591236270408483 0.00039635354736424893 0.00024540551801965324 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2'] 7520 13999 ASDPIHTFDLY True H1975_Epitope_Rep2 1277.59281749585 1277.59172993586 58.996 2 0.25911694627924686 0.00039635354736424893 0.00024544312499596 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-2|WDR81', 'nc|ENSG00000167716|Q562E7-6|WDR81', 'nc|ENSG00000167716|Q562E7-5|WDR81', 'nc|ENSG00000167716|Q562E7-3|WDR81', 'ENST00000464528.5_1_17:1639209-1640976:+|nuORF'] 49387 3715 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 19.096 3 0.2591044068547575 0.00039635354736424893 0.00024551372682942373 ['ENSG00000044574|ENST00000324460|HSPA5'] 14910 16040 DYAYLREHF True PC9_epitope_Rep2 1212.5563724174797 1212.55526993586 66.954 2 0.2591016730275296 0.00039635354736424893 0.00024552912204129105 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 125033 15770 VIDEIRDLLY True H1975_Epitope_Rep2 1247.67615319699 1247.6750499358602 65.839 2 0.2590684946837449 0.00039635354736424893 0.000245716038938875 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 134002 8921 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 39.673 3 0.2590580462891416 0.00039635354736424893 0.0002457749315986191 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 10124 9299 AYVHMVTHF True NCI_RA007_Epitope_Rep2 1103.52223583823 1103.52112993586 40.778 2 0.2590465867054691 0.00039635354736424893 0.000245839540118275 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 54688 21157 KYLTEGLLQF True PC9_epitope_Rep3 1210.65977485686 1210.6586699358602 86.666 2 0.2590414884064034 0.00039635354736424893 0.0002458682895259432 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 106268 12723 STESMDFLKY True H1975_Epitope_Rep2 1219.5430904221098 1219.54198993586 54.041 2 0.2590373214091001 0.00039635354736424893 0.0002458917898071059 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 91064 20737 RFLNDPGHLLW True PC9_epitope_Rep1 1366.7146043943799 1366.71295490379 84.591 3 0.25901563764195834 0.00039635354736424893 0.0002460141143511118 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 70018 12143 LVMEEAPESYK True PC9_epitope_Rep5 1294.6115043350999 1294.6104099358602 51.698 2 0.2590085116432632 0.00039635354736424893 0.0002460543275296319 ['ENSG00000100220|ENST00000216038|RTCB'] 103067 5942 SPGLQKEAV True PC9_epitope_Rep1 927.5025459394699 927.50144993586 27.67 2 0.25898630141502116 0.00039635354736424893 0.0002461797057536631 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 98648 13152 [Acetylation]-SGALDVLQM[Oxidation]K True H1975_Epitope_Rep3 1118.5641609165998 1118.56306993586 55.837 2 0.25898599005631223 0.00039635354736424893 0.00024618146384938197 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF', 'ENST00000489520.2_1_12:66152652-66152778:-|nuORF'] 9937 14975 AYMPHTFFI True NCI_RA007_Epitope_Rep4 1125.53173789277 1125.53064993586 65.065 2 0.2589747717045279 0.00039635354736424893 0.0002462448169831526 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 34171 17815 GNFNYIEFTR True PC9_epitope_Rep4 1259.5934862021898 1259.5923899358602 76.559 2 0.2589600600479922 0.00039635354736424893 0.00024632792253724355 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 42946 14324 IESLIAVFQK True H1975_Epitope_Rep1 1146.6648602373 1146.66376993586 60.287 2 0.25895964156359186 0.00039635354736424893 0.0002463302869498302 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 54583 13765 KYITQGQLLQF True NCI_RA007_Epitope_Rep1 1337.73433677945 1337.7332299358602 57.56 2 0.2589268145754342 0.00039635354736424893 0.000246515828412223 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 141324 4075 YTDSSYEEKKY True H1975_Epitope_Rep3 1411.61434078607 1411.61269490379 20.8 3 0.2589169701825708 0.00039635354736424893 0.00024657149721092066 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 54572 5183 KYISKPENL True PC9_epitope_Rep6 1090.60225998074 1090.60116993586 27.683 2 0.2588445446163541 0.00039635354736424893 0.0002469814421184396 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 73295 4202 M[Oxidation]TDIKNDSY True H1975_Epitope_Rep2 1101.46484048185 1101.46374993586 21.27 2 0.25879168590168167 0.00039635354736424893 0.0002472810653660316 ['ENSG00000137819|ENST00000395407|PAQR5'] 86034 13875 QHQLIQEAL True PC9_epitope_Rep5 1078.5771078620598 1078.5760099358602 58.39 2 0.25868884642463646 0.00039635354736424893 0.00024786504269764864 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 70849 19281 LYDIILKNF True PC9_epitope_Rep6 1137.64339651673 1137.6422899358602 86.811 2 0.2586838942094444 0.00039635354736424893 0.00024789319886694354 ['ENSG00000092010|ENST00000206451|PSME1'] 72682 4442 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1273.50672275761 1273.50562993586 22.197 2 0.258682586386893 0.00039635354736424893 0.00024790063511943915 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 83312 16839 PTDYADIMMGY True H1975_Epitope_Rep1 1275.51516142211 1275.51406993586 70.181 2 0.2586738613700014 0.00039635354736424893 0.00024795025110940804 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 70324 11334 LVSESSDVLPK True PC9_epitope_Rep1 1172.6288686514001 1172.6277699358602 48.476 2 0.25866631702195747 0.00039635354736424893 0.0002479931610889218 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 2131 10823 AELNEFLTR True H1975_Epitope_Rep3 1091.56112344475 1091.56002993586 46.711 2 0.2586662783334753 0.00039635354736424893 0.0002479933811565349 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 91277 13149 RGLDDIKDLKV True PC9_epitope_Rep4 1270.7245003717399 1270.72285490379 58.474 3 0.25864517482669636 0.00039635354736424893 0.0002481134511821668 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF'] 69565 9745 LVDEPQNLIK True NCI_RA007_Epitope_Rep2 1167.6499384491499 1167.6488499358602 42.527 2 0.258638285559487 0.00039635354736424893 0.0002481526608104441 ['CON__P02769'] 72487 6786 MLDHQPPQY True H1975_Epitope_Rep2 1127.50697969691 1127.50588993586 31.018 2 0.25863069606489103 0.00039635354736424893 0.00024819586290680156 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 47731 17641 IYDPNLAFLRF True NCI_RA007_Epitope_Rep5 1367.7237720957498 1367.72266993586 74.639 2 0.25862395883571676 0.00039635354736424893 0.00024823421992129153 ['ENSG00000197943|ENST00000564138|PLCG2'] 2198 5483 AEMAEEAQQQA True H1975_Epitope_Rep2 1204.50301651528 1204.50190993586 26.105 2 0.25861641836087446 0.00039635354736424893 0.00024827715709338353 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 80635 5808 PGSEETQTLVR True NCI_RA007_Epitope_Rep2 1215.6095301891498 1215.6084299358602 27.21 2 0.2586106148288586 0.00039635354736424893 0.00024831020878809777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 90243 7604 REEEEKLLHLA True H1975_Epitope_Rep1 1365.7252286477299 1365.72358490379 34.239 3 0.25859052306560426 0.00039635354736424893 0.00024842466744852176 ['ENSG00000096401|ENST00000371477|CDC5L', 'CDC5L|p.L387Cfs*9|1|0.66|ENSG00000096401|chr6:44419515-44419515|T/-|frameshift_variant'] 95966 8373 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64422490379 38.88 3 0.25857033971197263 0.00039635354736424893 0.00024853970111644267 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 15054 10069 DYQALRTSI True NCI_RA007_Epitope_Rep5 1065.54547338061 1065.54436993586 45.367 2 0.25854275223297657 0.00039635354736424893 0.0002486970204520908 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 88570 12637 QTDIQGALSAY True H1975_Epitope_Rep3 1165.5615173675699 1165.5604299358602 53.813 2 0.258541856113773 0.00039635354736424893 0.0002487021323013706 ['ENSG00000198730|ENST00000361367|CTR9'] 56721 11657 LDLEIATYR True H1975_Epitope_Rep3 1092.58152453616 1092.5804299358601 49.974 2 0.2585154550181397 0.00039635354736424893 0.0002488527827629758 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 34488 12732 GPLLEEQALTK True PC9_epitope_Rep4 1197.6605031328497 1197.6594099358601 56.828 2 0.2585076680971222 0.00039635354736424893 0.00024889723411032307 ['ENSG00000171262|ENST00000397609|FAM98B', 'nc|ENSG00000171262|Q52LJ0-1|FAM98B'] 4616 9799 ALAAAGYDVEK True PC9_epitope_Rep5 1106.56078909158 1106.5596899358602 42.661 2 0.2584984588724491 0.00039635354736424893 0.00024894981489517867 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 27667 9850 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 42.821 2 0.2584947772713583 0.00039635354736424893 0.0002489708383976321 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 24291 18120 EYTPRSWNF True PC9_epitope_Rep5 1198.54072235334 1198.5396299358601 74.709 2 0.2584451373093221 0.00039635354736424893 0.0002492544774065539 ['ENSG00000156671|ENST00000542569|SAMD8'] 67951 11241 LTDDGNKWLY True H1975_Epitope_Rep3 1223.58225281215 1223.5811499358601 48.341 2 0.25844334241419803 0.00039635354736424893 0.000249264739366399 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 119748 13972 VAYEEFEKV True PC9_epitope_Rep4 1112.5389910178399 1112.5378899358602 61.649 2 0.25843916008085355 0.00039635354736424893 0.0002492886526774653 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 127314 12499 VM[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep2 1313.6325745132897 1313.6314699358602 53.229 2 0.25840368160010935 0.00039635354736424893 0.0002494916003445009 ['CON__P02769'] 95654 13653 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.58635490379 57.372 3 0.2583807205876814 0.00039635354736424893 0.0002496230325450079 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 54408 16459 KYFLKPEVL True PC9_epitope_Rep1 1135.6641319613097 1135.66302993586 68.134 2 0.25837566920025296 0.00039635354736424893 0.00024965195673764195 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 59197 20070 LFDQAFGLPR True PC9_epitope_Rep2 1162.6134933707797 1162.6123899358602 82.605 2 0.25835478914408505 0.00039635354736424893 0.0002497715513653415 ['ENSG00000106211|ENST00000248553|HSPB1'] 133997 10052 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5281849037901 43.533 3 0.25834727270686786 0.00039635354736424893 0.0002498146172905982 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 133090 10125 VVQDGITLITK True NCI_RA007_Epitope_Rep5 1185.69688864157 1185.6957899358601 45.58 2 0.25829240803282644 0.00039635354736424893 0.00025012919356173536 ['ENSG00000079246|ENST00000392132|XRCC5'] 133989 6998 VYISEHEHF True NCI_RA007_Epitope_Rep4 1159.5298233164701 1159.5281849037901 33.543 3 0.25829191904111015 0.00039635354736424893 0.00025013199906599997 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 115094 13649 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61225490379 64.277 3 0.2582919072653667 0.00039635354736424893 0.0002501320666276527 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 53830 4323 KTFEGNLTTK True NCI_RA007_Epitope_Rep4 1137.6029882567298 1137.60188993586 22.971 2 0.2582885047671658 0.00039635354736424893 0.0002501515887431465 ['ENSG00000174231|ENST00000304992|PRPF8'] 17991 12457 EIDM[Oxidation]NDIKAFY True H1975_Epitope_Rep2 1373.6173183719698 1373.61622993586 53.005 2 0.2582848072880511 0.00039635354736424893 0.000250172805067361 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 71197 19290 LYPDHFHLL True PC9_epitope_Rep1 1153.59202965021 1153.59092993586 79.002 2 0.258275653448655 0.00039635354736424893 0.000250225338024897 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 141822 19874 YVDDTQFVRF True PC9_epitope_Rep1 1288.60880191316 1288.6077099358602 81.263 2 0.2582743314339879 0.00039635354736424893 0.0002502329258467725 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 64837 8927 LQDGEFSM[Oxidation]DLR True H1975_Epitope_Rep3 1325.59216625329 1325.59106993586 39.335 2 0.25826809684703184 0.00039635354736424893 0.0002502687129264629 ['ENSG00000108518|ENST00000225655|PFN1'] 46037 14261 ISGLIYEETR True PC9_epitope_Rep3 1179.6135529404298 1179.61244993586 59.94 2 0.25826212970878093 0.00039635354736424893 0.00025030296963085547 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 24442 9821 FADLSEAANR True PC9_epitope_Rep2 1092.5199869087598 1092.5188899358602 43.112 2 0.25824884778267604 0.00039635354736424893 0.0002503792366241044 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 141789 10086 YVDDASWM[Oxidation]RY True H1975_Epitope_Rep1 1320.54448778488 1320.5433899358602 43.732 2 0.2582417464159506 0.00039635354736424893 0.000250420023388179 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 43071 15335 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep5 1233.62748913285 1233.62638993586 63.996 2 0.2582155888510924 0.00039635354736424893 0.00025057031704211075 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 49082 2760 KEIEEYIHKP True H1975_Epitope_Rep2 1284.6714021697198 1284.66976490379 14.644 3 0.25819172198319706 0.00039635354736424893 0.0002507075278951751 ['ENSG00000039123|ENST00000230640|MTREX'] 132047 11501 VTTDIQVKV True PC9_epitope_Rep4 1001.5757108797299 1001.5746099358599 52.001 2 0.2581723209183481 0.00039635354736424893 0.0002508191202851736 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 15389 7286 EAIEGTYIDK True NCI_RA007_Epitope_Rep5 1137.5553693579698 1137.55426993586 34.702 2 0.25815634813198723 0.00039635354736424893 0.0002509110310262386 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF'] 91072 18266 RFLNDPGHLLW True PC9_epitope_Rep6 1366.7146043943799 1366.71295490379 82.9 3 0.25815518852818475 0.00039635354736424893 0.0002509177049421806 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 122068 21391 VFYPYPQYF True PC9_epitope_Rep4 1222.5698972232997 1222.5688099358601 90.449 2 0.2581144081087258 0.00039635354736424893 0.0002511525233597615 ['ENSG00000103160|ENST00000219439|HSDL1'] 100897 6863 SLEVENQSLR True H1975_Epitope_Rep3 1173.59896550545 1173.5978699358602 31.356 2 0.25811278364880663 0.00039635354736424893 0.00025116188174943363 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF', 'ENST00000527741.5_1_8:144663279-144663534:-|nuORF'] 140744 11133 YSDDNPYYNY True H1975_Epitope_Rep1 1312.48841199696 1312.4873099358601 47.79 2 0.25811245285858553 0.00039635354736424893 0.0002511637874494896 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 73388 8404 MTEVLPNQRY True H1975_Epitope_Rep3 1249.6125073946098 1249.6114099358601 37.309 2 0.25809559358636247 0.00039635354736424893 0.0002512609338061847 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'SLC35E4-SEC14L2|2|fusion', 'SLC35E4-SEC14L2|3|fusion', 'SLC35E4-SEC14L2|1|fusion', 'ENST00000454552.5_3_22:30812232-30824714:+|nuORF'] 136767 19057 WYQTKFETL True PC9_epitope_Rep3 1214.5971746002997 1214.5960699358602 78.525 2 0.25807939733515967 0.00039635354736424893 0.0002513542951731019 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 19115 12939 ELGLPEELVSR True H1975_Epitope_Rep1 1240.66631678928 1240.66520993586 54.846 2 0.25807186913545327 0.00039635354736424893 0.0002513977024210949 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS', 'KPNA1-GMPS|1|fusion'] 120545 12642 VEFTRSLFVN True NCI_RA007_Epitope_Rep5 1210.6346227381798 1210.63352993586 55.281 2 0.2580566780428391 0.00039635354736424893 0.00025148531642795623 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 74394 12583 NESFGFTADLR True NCI_RA007_Epitope_Rep1 1255.5833154413099 1255.5822099358602 52.925 2 0.2580333606139479 0.00039635354736424893 0.0002516198582852697 ['ENSG00000167658|ENST00000309311|EEF2'] 47900 12719 IYIKHPHLF True PC9_epitope_Rep2 1166.66004964038 1166.6584049037901 54.23 3 0.2580050765514151 0.00039635354736424893 0.000251783154504468 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 96269 14176 RYQQWMERF True PC9_epitope_Rep4 1342.6240751378198 1342.62241490379 62.431 3 0.257989811274975 0.00039635354736424893 0.00025187133172311596 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 66107 10806 LSELEAALQR True NCI_RA007_Epitope_Rep1 1128.6138872935999 1128.61278993586 46.028 2 0.25798956708956755 0.00039635354736424893 0.0002518727424691779 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 49400 9461 KEVDLIPKV True NCI_RA007_Epitope_Rep4 1039.62774645259 1039.62664993586 43.25 2 0.25798880263417917 0.00039635354736424893 0.0002518771590514074 ['nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000492914.1_1_10:51829372-51845265:+|nuORF', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C'] 108069 18942 SYANVKQWL True PC9_epitope_Rep1 1107.57129420563 1107.57018993586 77.644 2 0.25798879833366456 0.00039635354736424893 0.0002518771838975191 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 138347 13166 YHFEEVQKL True PC9_epitope_Rep1 1191.5924235730297 1191.5907749037901 55.508 3 0.25798088524606805 0.00039635354736424893 0.00025192290571729936 ['ENSG00000140848|ENST00000290776|CPNE2'] 85384 4793 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 23.526 2 0.25797334848141723 0.00039635354736424893 0.000251966460876935 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 45484 10983 IQLVEEELDR True NCI_RA007_Epitope_Rep2 1242.6455813446998 1242.64448993586 47.329 2 0.2579683660479221 0.00039635354736424893 0.00025199525863368687 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 78095 6812 NVYEVVNPK True NCI_RA007_Epitope_Rep5 1060.5553097883198 1060.5542099358602 32.887 2 0.2579667568346111 0.00039635354736424893 0.00025200456036238763 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant', 'CPNE8|p.K277Efs*5|1|0.39|ENSG00000139117|chr12:38724870-38724871|-/T|frameshift_variant'] 134310 16178 VYNSEYYHF True PC9_epitope_Rep1 1220.5138388991602 1220.51274993586 67.043 2 0.2579637176083205 0.00039635354736424893 0.00025202212892754027 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 26472 11934 FIDVDDERWHY True H1975_Epitope_Rep2 1493.65754301073 1493.6558849037901 50.982 3 0.2579594071458961 0.00039635354736424893 0.0002520470481110166 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 96270 16878 RYQQWMERF True PC9_epitope_Rep5 1342.6240751378198 1342.62296993586 69.932 2 0.25795923181818103 0.00039635354736424893 0.0002520480617490768 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 767 7415 [Acetylation]-AAVQAAEVK True H1975_Epitope_Rep3 927.5025462557699 927.50144993586 33.5 2 0.2579454002316862 0.00039635354736424893 0.000252128040433116 ['ENSG00000065427|ENST00000302445|KARS1', 'ENST00000568682.5_2_16:75676732-75681537:-|nuORF'] 80185 18996 PFVDHVFTF True PC9_epitope_Rep6 1107.53893144819 1107.5378299358601 85.711 2 0.25792541957140386 0.00039635354736424893 0.00025224361995085875 ['ENSG00000113460|ENST00000336767|BRIX1'] 13250 13557 DLSSVQTLLTK True H1975_Epitope_Rep3 1203.6710678165498 1203.66996993586 57.43 2 0.25792033631052913 0.00039635354736424893 0.0002522730328985521 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 27487 8143 FMEKETPLRY True H1975_Epitope_Rep3 1312.6485585501598 1312.64692490379 36.299 3 0.2578938984893699 0.00039635354736424893 0.0002524260638102598 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 78103 6003 NVYYNEATGGK True NCI_RA007_Epitope_Rep2 1214.5567663402996 1214.5556699358601 27.96 2 0.2578849758196614 0.00039635354736424893 0.0002524777321883072 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF'] 130772 7229 VTADVINAAEK True NCI_RA007_Epitope_Rep2 1129.59790287629 1129.5968099358602 32.739 2 0.2578522423686094 0.00039635354736424893 0.00025266737210475026 ['ENSG00000092621|ENST00000641023|PHGDH', 'PHGDH|p.H275Qfs*2|1|0.28|ENSG00000092621|chr1:119737144-119737145|-/A|frameshift_variant', 'ENST00000496756.1_1_1:120254528-120263945:+|nuORF'] 100768 10797 SLEDQVEM[Oxidation]LR True H1975_Epitope_Rep1 1234.58635259686 1234.58524993586 46.494 2 0.25774905464745845 0.00039635354736424893 0.00025326612078439533 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 43065 10158 IEVIEIM[Oxidation]TDR True H1975_Epitope_Rep3 1233.62748913285 1233.62638993586 44.115 2 0.25771819399676765 0.00039635354736424893 0.00025344546636684 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 4754 12408 ALDLEIATYR True NCI_RA007_Epitope_Rep2 1163.6186383208699 1163.61754993586 52.872 2 0.2577179501853927 0.00039635354736424893 0.0002534468837746752 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 141273 12887 YTDKIMTYL True H1975_Epitope_Rep2 1146.5630975907 1146.56200993586 54.683 2 0.2577113095617227 0.00039635354736424893 0.00025348549237890644 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 54901 8939 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 39.742 3 0.25770737449601944 0.00039635354736424893 0.00025350837364295116 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 14388 10909 DTDEYVLKY True H1975_Epitope_Rep1 1144.52882025696 1144.5277299358602 46.924 2 0.2577017056886848 0.00039635354736424893 0.0002535413397499001 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1'] 45955 14973 ISEQFTAM[Oxidation]FR True PC9_epitope_Rep2 1244.58595867404 1244.58486993586 62.851 2 0.25767094555958925 0.00039635354736424893 0.00025372029563223384 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 64824 4404 LQDEIQNM[Oxidation]K True NCI_RA007_Epitope_Rep2 1133.5386741284499 1133.5375699358601 21.766 2 0.2576647721688416 0.00039635354736424893 0.0002537562263548162 ['ENSG00000026025|ENST00000544301|VIM'] 74885 7132 NHHLQETSF True PC9_epitope_Rep5 1111.50467119779 1111.50356993586 32.403 2 0.2576439711877539 0.00039635354736424893 0.00025387733096081275 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 134580 19331 VYSFGFERL True PC9_epitope_Rep4 1116.56039516876 1116.55928993586 82.464 2 0.2576321800230642 0.00039635354736424893 0.00025394600557714016 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 65761 11796 LSDDRSNILIY True H1975_Epitope_Rep1 1307.67213044571 1307.6710299358601 50.365 2 0.2576227732531985 0.00039635354736424893 0.000254000806247836 ['nc|ENSG00000142892|Q92643-2|PIGK', 'ENSG00000142892|ENST00000370812|PIGK'] 113056 10218 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1189.6376598937302 1189.63656993586 44.246 2 0.25759975781716493 0.00039635354736424893 0.0002541349363994142 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 142437 19596 YYFEGIKQTF True PC9_epitope_Rep2 1294.6233893481397 1294.6222899358602 80.759 2 0.2575993284540216 0.00039635354736424893 0.0002541374393311204 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 118254 11885 TYLEKAIKI True PC9_epitope_Rep6 1077.6433965167298 1077.6422899358602 56.944 2 0.25759496803530263 0.00039635354736424893 0.0002541628593778197 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 32342 14352 GFGFVTFDDHD True NCI_RA007_Epitope_Rep3 1255.51456717515 1255.51346993586 63.765 2 0.25756882347063526 0.00039635354736424893 0.00025431532848217545 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 68437 4886 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 23.879 2 0.25755711516916496 0.00039635354736424893 0.000254383638324872 ['ENSG00000124570|ENST00000380539|SERPINB6'] 137204 18914 YAYDGKDYLAL True PC9_epitope_Rep2 1290.6132185872598 1290.6121299358601 78.115 2 0.25755646596447107 0.00039635354736424893 0.00025438742652336607 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 78376 14805 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6069699358602 61.947 2 0.25753288621882087 0.00039635354736424893 0.0002545250559014577 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 74902 16980 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69592490379 70.136 3 0.2575206890017206 0.00039635354736424893 0.000254596277444569 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 11924 18460 DHMRFISEL True PC9_epitope_Rep1 1146.54917886206 1146.5480899358602 75.797 2 0.2575010793984301 0.00039635354736424893 0.00025471082299255145 ['ENSG00000273749|ENST00000617928|CYFIP1'] 78566 9070 NYQKRFQNL True PC9_epitope_Rep5 1209.6254550368096 1209.6243499358602 39.832 2 0.25748447442917877 0.00039635354736424893 0.000254807857959864 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 28948 9366 FTDQQKLIY True H1975_Epitope_Rep2 1154.5971746002997 1154.5960699358602 40.988 2 0.2573891284565841 0.00039635354736424893 0.0002553657516971142 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 114408 7053 TPTLVEVSR True NCI_RA007_Epitope_Rep3 1000.55530978832 1000.55420993586 34.862 2 0.2573839705647467 0.00039635354736424893 0.0002553959667247192 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 45824 12477 ISDGKEYLFY True H1975_Epitope_Rep2 1233.5917548666898 1233.59064993586 53.083 2 0.2573724308409072 0.00039635354736424893 0.0002554635796205256 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 22426 6638 ETEREYFNRY True H1975_Epitope_Rep1 1405.6262428824498 1405.62460490379 30.587 3 0.2573702037535083 0.00039635354736424893 0.00025547663050980293 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 95670 13619 RYFDPANGKF True PC9_epitope_Rep5 1213.5880068989297 1213.5869099358601 57.408 2 0.2573687030798023 0.00039635354736424893 0.00025548542494041864 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 26938 9564 FLDQNLQKY True H1975_Epitope_Rep1 1167.59242357303 1167.5913299358601 41.711 2 0.25734463295762583 0.00039635354736424893 0.00025562652506748966 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 137655 14544 YEIKQFLECA True H1975_Epitope_Rep2 1242.59546034814 1242.5943699358602 61.1 2 0.2573271986643762 0.00039635354736424893 0.00025572877443895376 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2'] 17989 15521 EIDMNDIKAFY True H1975_Epitope_Rep2 1357.62240337197 1357.6213099358602 64.856 2 0.25731767681547957 0.00039635354736424893 0.00025578463588203773 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 21905 12350 ESDLYSLAHSY True H1975_Epitope_Rep2 1283.5669966708301 1283.56588993586 52.589 2 0.2572719167412749 0.00039635354736424893 0.0002560532653035561 ['ENSG00000176046|ENST00000324873|NUPR1', 'nc|ENSG00000176046|O60356-2|NUPR1'] 118601 16249 TYRNVMEQF True PC9_epitope_Rep5 1186.54409348162 1186.54298993586 67.491 2 0.25727106746510814 0.00039635354736424893 0.0002560582535563203 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 67948 11634 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 49.819 2 0.25725050941496774 0.00039635354736424893 0.00025617903168818093 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 7539 12403 ASEAEMRLFY True H1975_Epitope_Rep1 1215.55940919259 1215.55830993586 52.742 2 0.25723725363418376 0.00039635354736424893 0.0002562569394091991 ['ENSG00000150990|ENST00000308736|DHX37'] 138318 16709 YHDINVYSL True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 72.24 2 0.25720550769370715 0.00039635354736424893 0.0002564436152202183 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 138057 13960 YGEPGEVFINK True PC9_epitope_Rep2 1251.6135529404298 1251.61244993586 58.972 2 0.25718896086047954 0.00039635354736424893 0.000256540969672094 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 141659 11568 YTSYPMHDFY True H1975_Epitope_Rep1 1322.52777471114 1322.5266699358601 49.482 2 0.2571887338016321 0.00039635354736424893 0.0002565423058463202 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 23965 7822 EYLTKVDKL True NCI_RA007_Epitope_Rep4 1107.6175756917098 1107.61646993586 36.777 2 0.2571820373731911 0.00039635354736424893 0.0002565817154853512 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 115088 16041 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61225490379 66.69 3 0.2571672979182697 0.00039635354736424893 0.00025666848110261173 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 43579 8456 IGSLIDVNQSK True H1975_Epitope_Rep1 1172.6401020414398 1172.63900993586 37.455 2 0.25716568628121794 0.00039635354736424893 0.00025667796998592374 ['ENST00000544850.5_1_12:10758876-10761762:-|nuORF', 'nc|ENSG00000162385|P61326-2|MAGOH', 'ENSG00000162385|ENST00000371470|MAGOH', 'ENSG00000111196|ENST00000320756|MAGOHB'] 134516 21279 VYQLRFQFL True PC9_epitope_Rep2 1212.6655289436396 1212.6644299358602 87.312 2 0.2571534168120515 0.00039635354736424893 0.0002567502208315259 ['ENSG00000068654|ENST00000263857|POLR1A'] 52600 4029 KLLEGEESR True NCI_RA007_Epitope_Rep2 1059.5560380643099 1059.5549499358601 20.311 2 0.25715246714880885 0.00039635354736424893 0.00025675581393404815 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 139111 10691 YLDNVIGHSY True H1975_Epitope_Rep3 1179.55603806431 1179.5549499358601 46.198 2 0.25713542098756653 0.00039635354736424893 0.00025685622916346064 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 98373 11606 SEYMRNGDFLP True H1975_Epitope_Rep2 1327.5866865695898 1327.58558993586 49.709 2 0.2571202449055722 0.00039635354736424893 0.0002569456612813569 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'ENST00000462970.5_1_1:151227258-151237442:+|nuORF', 'ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 33968 7985 GLSQSALPYR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 37.401 2 0.2571156866412596 0.00039635354736424893 0.00025697252906676724 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 117604 11270 TVTDFPGFDER True H1975_Epitope_Rep1 1282.5829810881398 1282.58188993586 48.327 2 0.25710114296022696 0.00039635354736424893 0.0002570582727371349 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 120612 4836 VEHSDLSFSK True NCI_RA007_Epitope_Rep5 1147.5509526838698 1147.54984993586 25.293 2 0.2570895880149853 0.00039635354736424893 0.0002571264164682613 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 130168 5957 VSEEDVSSRY True H1975_Epitope_Rep2 1169.52004647841 1169.51894993586 27.895 2 0.257067915627257 0.00039635354736424893 0.00025725427527876864 ['ENSG00000177425|ENST00000328827|PAWR'] 42497 16052 IEEIKDFLLTA True H1975_Epitope_Rep2 1290.7071189721 1290.7060299358602 66.946 2 0.2570678950287683 0.00039635354736424893 0.0002572543968322906 ['ENSG00000172809|ENST00000311111|RPL38', 'ENST00000529123.2_1_17:72199871-72200367:+|nuORF', 'ENST00000530646.1_1_17:72199871-72200367:+|nuORF'] 72683 3494 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 18.347 2 0.2570434181678281 0.00039635354736424893 0.0002573988776569795 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 14284 16052 DSTLIM[Oxidation]QLLR True H1975_Epitope_Rep3 1204.6485589305998 1204.64746993586 67.201 2 0.2570131314408899 0.00039635354736424893 0.00025757776525314367 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 91408 18975 RHIEIFTDL True PC9_epitope_Rep3 1142.6084079903399 1142.60730993586 78.21 2 0.257011757072887 0.00039635354736424893 0.0002575858858691047 ['ENSG00000079246|ENST00000392132|XRCC5'] 131713 7595 VTNWDDMEK True NCI_RA007_Epitope_Rep4 1136.4808245187198 1136.4797299358602 35.865 2 0.25700448532951403 0.00039635354736424893 0.0002576288560957592 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 49384 3358 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 17.721 3 0.25700362035701846 0.00039635354736424893 0.00025763396787415843 ['ENSG00000044574|ENST00000324460|HSPA5'] 20065 9961 EMEAELEDER True PC9_epitope_Rep5 1249.5132468458098 1249.5121499358602 43.29 2 0.2569869025716219 0.00039635354736424893 0.0002577327859166252 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 94719 5152 RSDTPLIYK True NCI_RA007_Epitope_Rep5 1091.5975089534697 1091.59640993586 26.512 2 0.2569605815239676 0.00039635354736424893 0.000257888445382667 ['ENSG00000196305|ENST00000443024|IARS1'] 96265 17045 RYQQWMERF True PC9_epitope_Rep1 1342.6240751378198 1342.62241490379 70.389 3 0.2569373958374898 0.00039635354736424893 0.0002580256407581517 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 54040 11076 KVIDPATATSV True PC9_epitope_Rep1 1100.607739284 1100.60664993586 47.492 2 0.25693640780927857 0.00039635354736424893 0.00025803148878739054 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 137351 7909 YDNEFGYSNR True NCI_RA007_Epitope_Rep1 1263.5156298043098 1263.51452993586 34.758 2 0.2569346763537011 0.00039635354736424893 0.000258041737401011 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 90778 6104 RESEGFEEHVP True H1975_Epitope_Rep2 1314.5840437173 1314.5824049037901 28.456 3 0.25693123828774517 0.00039635354736424893 0.0002580620887770144 ['ENSG00000119801|ENST00000261353|YPEL5'] 89427 14660 QYDPYTDSRF True PC9_epitope_Rep3 1290.55168095986 1290.5505899358602 61.525 2 0.2569247271544401 0.00039635354736424893 0.00025810063535512874 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 133094 8830 VVQELQQAISK True NCI_RA007_Epitope_Rep1 1241.6979512707296 1241.6968499358602 38.348 2 0.25691968428046597 0.00039635354736424893 0.00025813049365250784 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 39733 13270 HLVDEPQNLIK True PC9_epitope_Rep3 1304.7088503076 1304.7072149037901 56.078 3 0.25690479720948783 0.00039635354736424893 0.00025821865854473133 ['CON__P02769'] 140890 10643 YSEDRIGLADY True H1975_Epitope_Rep2 1300.59354577184 1300.59244993586 45.962 2 0.2568740200074995 0.00039635354736424893 0.0002584010244021161 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 118032 14244 TYESIFSHF True NCI_RA007_Epitope_Rep3 1129.50802524273 1129.5069299358602 63.341 2 0.256860391036254 0.00039635354736424893 0.00025848182213122786 ['ENST00000530761.5_1_11:117857521-117870353:+|nuORF', 'ENSG00000110324|ENST00000227752|IL10RA'] 141675 6320 YTTDRVM[Oxidation]TV True PC9_epitope_Rep2 1100.5172104078802 1100.5161099358602 29.707 2 0.25684311482868377 0.00039635354736424893 0.0002585842784580875 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 112164 4881 TKDGVVEITGK True NCI_RA007_Epitope_Rep1 1145.62920300457 1145.6275649037902 23.066 3 0.2568097639503493 0.00039635354736424893 0.0002587821805563736 ['ENSG00000106211|ENST00000248553|HSPB1'] 127147 6374 VLTVINQTQK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 31.191 2 0.25677124585023897 0.00039635354736424893 0.00025901093354547064 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 57878 13612 LEFLNRFEEA True H1975_Epitope_Rep2 1266.6244519773002 1266.62334993586 57.496 2 0.256766509567564 0.00039635354736424893 0.0002590390755780347 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 86032 14071 QHQLIQEAL True PC9_epitope_Rep3 1078.5771078620598 1078.5760099358602 59.211 2 0.256754482235004 0.00039635354736424893 0.0002591105533254338 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 54368 11571 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.53333490379 49.832 3 0.2567504956869308 0.00039635354736424893 0.0002591342495135627 ['ENSG00000123975|ENST00000314355|CKS2'] 2365 5481 AEQAERYDEM True H1975_Epitope_Rep2 1240.50301651528 1240.50190993586 26.097 2 0.2567277031660088 0.00039635354736424893 0.0002592697708080435 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 8032 4488 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 22.376 2 0.25672196593399915 0.00039635354736424893 0.00025930389481472634 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 1020 7433 AEAEAWYQTK True H1975_Epitope_Rep3 1195.5509526838698 1195.54984993586 33.569 2 0.2567086968529767 0.00039635354736424893 0.0002593828341271819 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 54502 13412 KYIDQKFVL True PC9_epitope_Rep4 1152.6542955536 1152.6531899358602 59.49 2 0.2567045645959838 0.00039635354736424893 0.0002594074223244823 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 117344 7872 TVPAYFNDSQR True H1975_Epitope_Rep3 1296.6098645423199 1296.6087699358602 35.255 2 0.2567017605340622 0.00039635354736424893 0.0002594241086839256 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 7948 6981 ATATANQIILK True NCI_RA007_Epitope_Rep3 1142.66592286646 1142.66482993586 34.568 2 0.2566774404252199 0.00039635354736424893 0.00025956887746870024 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 120206 9641 VEAQLQELQVK True NCI_RA007_Epitope_Rep1 1283.7085159544297 1283.7074099358601 41.501 2 0.25667285572416615 0.00039635354736424893 0.0002595961776000085 ['ENSG00000100345|ENST00000216181|MYH9'] 69562 9312 LVDEPQNLIK True H1975_Epitope_Rep1 1167.6499384491499 1167.6488499358602 40.725 2 0.2566242958755696 0.00039635354736424893 0.0002598855095397232 ['CON__P02769'] 48042 23311 IYLPYLQNW True PC9_epitope_Rep3 1208.6229954253201 1208.62188993586 94.945 2 0.2566097054194318 0.00039635354736424893 0.0002599725063192188 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 86536 12427 QLDAELLRY True H1975_Epitope_Rep2 1119.59242357303 1119.5913299358601 52.886 2 0.2565965947030524 0.00039635354736424893 0.00026005070492765716 ['ENSG00000105849|ENST00000222567|POLR1F'] 2393 5568 AEQEEEVQRAV True H1975_Epitope_Rep3 1286.61025846514 1286.60916993586 26.458 2 0.25657939152576087 0.00039635354736424893 0.0002601533487009141 ['ENST00000531121.5_1_11:65686926-65687405:+|nuORF'] 69020 4787 LTQDQDVDVK True NCI_RA007_Epitope_Rep2 1159.57208205127 1159.57098993586 23.25 2 0.2565633958779676 0.00039635354736424893 0.0002602488241080953 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 86558 6533 QLDSAQKNLY True H1975_Epitope_Rep2 1178.59315184902 1178.5920499358601 30.04 2 0.2565570018927756 0.00039635354736424893 0.0002602869985845395 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674', 'ENST00000521626.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-2|KRBOX4', 'ENSG00000147121|ENST00000344302|KRBOX4', 'ENST00000453909.3_1_X:46387515-46388371:-|nuORF', 'ENST00000522017.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-3|KRBOX4'] 44057 19907 IILEEGKEILV True PC9_epitope_Rep1 1254.7435044808199 1254.74240993586 81.39 2 0.2565487108123259 0.00039635354736424893 0.00026033650778437163 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 49370 11714 KESYSIYVYK True PC9_epitope_Rep3 1278.6496040959798 1278.6479549037902 50.076 3 0.25654155494494213 0.00039635354736424893 0.00026037924578287884 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 2480 5431 AEQLRMEET True H1975_Epitope_Rep2 1105.5073736197298 1105.50626993586 25.916 2 0.25653059091580105 0.00039635354736424893 0.00026044474144559045 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 12427 12214 DIVENYFM[Oxidation]R True H1975_Epitope_Rep1 1201.54375950889 1201.5426699358602 52.003 2 0.2565042082195215 0.00039635354736424893 0.00026060241105631173 ['ENSG00000130726|ENST00000253024|TRIM28'] 28745 14747 FSSPHLVQV True PC9_epitope_Rep2 1012.5341804209198 1012.53308993586 61.991 2 0.25648250112506227 0.00039635354736424893 0.00026073220983278213 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 10139 11773 AYVHMVTHF True PC9_epitope_Rep4 1103.52223583823 1103.52112993586 53.051 2 0.2564803705106982 0.00039635354736424893 0.00026074495345117655 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 141157 7836 YSTDVSVDEVK True NCI_RA007_Epitope_Rep2 1240.5823123818002 1240.5812099358602 35.11 2 0.2564788114990582 0.00039635354736424893 0.000260754278598155 ['nc|ENSG00000148672|P00367-3|GLUD1', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1'] 27475 10516 FMDPEMETRY True H1975_Epitope_Rep3 1317.53695949585 1317.53586993586 45.513 2 0.25647812443002277 0.00039635354736424893 0.0002607583883719421 ['ENSG00000138031|ENST00000679454|ADCY3', 'nc|ENSG00000138031|O60266-2|ADCY3'] 4741 9612 ALDGRETDFY True H1975_Epitope_Rep3 1185.5302172392899 1185.52912993586 41.986 2 0.25646063575835537 0.00039635354736424893 0.00026086302051269746 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 49372 6720 KESYSVYVYK True H1975_Epitope_Rep3 1264.6339540318397 1264.63231490379 30.805 3 0.25646031482315923 0.00039635354736424893 0.0002608649410137332 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 67944 11244 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 48.294 2 0.25644251672471413 0.00039635354736424893 0.00026097146839844664 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 92511 20693 RLYDGLFKVI True PC9_epitope_Rep5 1222.70739375562 1222.70575490379 84.651 3 0.25641232732302094 0.00039635354736424893 0.0002611522614562988 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 77393 13470 NSFVNDIFER True H1975_Epitope_Rep1 1239.5884008217497 1239.58730993586 56.929 2 0.25641223051195194 0.00039635354736424893 0.0002611528414235285 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 140819 4734 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 23.301 2 0.25638779924037647 0.00039635354736424893 0.00026129924341153425 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 137350 7210 YDNEFGYSNR True H1975_Epitope_Rep3 1263.5156298043098 1263.51452993586 32.707 2 0.2563429052621647 0.00039635354736424893 0.00026156848064340165 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 14008 19483 DRFEFPEQL True PC9_epitope_Rep4 1179.5560380643099 1179.5549499358601 83.058 2 0.25633996753767524 0.00039635354736424893 0.00026158610839296606 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 121414 10910 VEVTEFEDIK True NCI_RA007_Epitope_Rep5 1207.59723416995 1207.59612993586 48.604 2 0.25633797725471535 0.00039635354736424893 0.00026159805171757856 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 70763 13845 LYADVGGKQF True PC9_epitope_Rep1 1096.55530978832 1096.5542099358602 58.096 2 0.25633247262219055 0.00039635354736424893 0.00026163108685840715 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 133765 17303 VYENVSHFL True PC9_epitope_Rep2 1106.53965972418 1106.53856993586 71.815 2 0.2562994614580424 0.00039635354736424893 0.0002618292856368948 ['ENSG00000164933|ENST00000297578|SLC25A32'] 42562 11815 IEFASFEDAK True NCI_RA007_Epitope_Rep1 1155.5448046742697 1155.54370993586 49.937 2 0.2562528331542085 0.00039635354736424893 0.000262109498048588 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 134026 10074 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5287299358602 43.73 2 0.25622960881347717 0.00039635354736424893 0.0002622491766491666 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 58549 10516 LEQLFQDEVAK True H1975_Epitope_Rep3 1318.67688147298 1318.6757899358602 45.513 2 0.25621555177033833 0.00039635354736424893 0.00026233375643604337 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 5428 6945 ALTSELANAR True H1975_Epitope_Rep3 1044.55637241748 1044.55526993586 31.675 2 0.25621510232531003 0.00039635354736424893 0.00026233646115168813 ['ENSG00000147065|ENST00000360270|MSN'] 49376 7154 KESYSVYVYK True NCI_RA007_Epitope_Rep2 1264.6339540318397 1264.6328499358601 32.45 2 0.25620514692281093 0.00039635354736424893 0.00026239637894410605 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 58052 8251 LEIIGNSKNVA True H1975_Epitope_Rep3 1156.64518742188 1156.6440899358602 36.723 2 0.2561849408582142 0.00039635354736424893 0.00026251803375994807 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 99026 20069 SHEEALSFVSL True PC9_epitope_Rep2 1217.5928174958499 1217.59172993586 82.601 2 0.2561705806504238 0.00039635354736424893 0.000262604526741362 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 46263 12924 ISPDQLADLYK True H1975_Epitope_Rep1 1261.6554177524097 1261.65432993586 54.786 2 0.2561356690098686 0.00039635354736424893 0.0002628149222222727 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 117063 5513 TVIHFNNPK True NCI_RA007_Epitope_Rep4 1068.5716285587998 1068.5705299358601 27.799 2 0.25612292131083886 0.00039635354736424893 0.0002628917885065398 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4', 'ENST00000418879.1_1_6:137865036-137865375:-|nuORF'] 61899 13751 LLDEAQRLLY True H1975_Epitope_Rep2 1232.67648755016 1232.67538993586 58.038 2 0.256122816896493 0.00039635354736424893 0.000262892418198898 ['ENSG00000083817|ENST00000196489|ZNF416', 'ZIK1|p.K218Rfs*65|1|0.71|ENSG00000171649|chr19:57590460-57590460|G/-|frameshift_variant', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 66075 9873 LSEINKPNFY True H1975_Epitope_Rep2 1223.61863832087 1223.61754993586 42.964 2 0.2561213041270791 0.00039635354736424893 0.0002629015414380677 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 27834 12329 FQDEVAKAQQL True PC9_epitope_Rep5 1275.64591569787 1275.6448099358602 52.416 2 0.25611727024226594 0.00039635354736424893 0.0002629258706202619 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 95404 20511 RWFDKSFTF True PC9_epitope_Rep1 1232.59784330664 1232.59674993586 83.706 2 0.25611593127607707 0.00039635354736424893 0.000262933946697301 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 43063 10013 IEVIEIM[Oxidation]TDR True H1975_Epitope_Rep1 1233.62748913285 1233.62638993586 43.451 2 0.2561081397175442 0.00039635354736424893 0.0002629809470120613 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 78425 14092 NYLSHHLTI True PC9_epitope_Rep5 1096.5665431783602 1096.5654499358602 59.216 2 0.2560960980447005 0.00039635354736424893 0.0002630536014712289 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 78368 12304 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.6069699358602 55.14 2 0.25609401655591685 0.00039635354736424893 0.0002630661623503568 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 139192 12163 YLEQLHQLY True H1975_Epitope_Rep2 1205.60807363717 1205.6069699358602 51.871 2 0.25608357346342026 0.00039635354736424893 0.00026312919094422123 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 137746 7396 YENEVALRQ True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 33.828 2 0.2560791241568208 0.00039635354736424893 0.00026315604903761404 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 7880 10500 [Acetylation]-ATAEVLNIGKK True NCI_RA007_Epitope_Rep2 1184.6764878664596 1184.67538993586 45.437 2 0.25606009128208546 0.00039635354736424893 0.0002632709713821965 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 140916 6187 YSEGYPGQRY True H1975_Epitope_Rep3 1218.53055159246 1218.5294499358602 28.811 2 0.25603192249387263 0.00039635354736424893 0.0002634411495801787 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 88588 13890 QTDNIIYVY True H1975_Epitope_Rep3 1127.5498900547097 1127.5487899358602 58.737 2 0.25602799837142776 0.00039635354736424893 0.00026346486542113936 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 107276 19937 SVLDDNKLLTL True PC9_epitope_Rep4 1229.68671788069 1229.68562993586 84.823 2 0.2560264228629421 0.00039635354736424893 0.0002634743877720906 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 88870 13097 QVDPLSALKY True H1975_Epitope_Rep3 1132.6128246644398 1132.61172993586 55.623 2 0.25600417001530906 0.00039635354736424893 0.0002636089205172568 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 3425 9823 [Acetylation]-AGITTIEAVKR True H1975_Epitope_Rep3 1199.68738690333 1199.68628993586 42.811 2 0.2559901362173417 0.00039635354736424893 0.00026369379923227884 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 14714 10206 DVLLQVDDER True H1975_Epitope_Rep3 1200.59863115228 1200.5975299358602 44.302 2 0.2559837416060045 0.00039635354736424893 0.0002637324839757601 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 22369 14845 ETEEDKFLLL True H1975_Epitope_Rep1 1235.6285342982299 1235.6274299358602 62.333 2 0.255968401606594 0.00039635354736424893 0.00026382530779382106 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 34108 8181 GM[Oxidation]DVELTVEER True NCI_RA007_Epitope_Rep2 1292.59183190012 1292.59072993586 36.458 2 0.25593529335904763 0.00039635354736424893 0.00026402576061672697 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 75585 13552 NLDIIQQEY True H1975_Epitope_Rep3 1134.55570371114 1134.55460993586 57.41 2 0.25592730896847066 0.00039635354736424893 0.00026407412469460695 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 7906 9373 ATALEYVYK True NCI_RA007_Epitope_Rep5 1056.54916177872 1056.5480699358602 42.694 2 0.25590445412429447 0.00039635354736424893 0.00026421261308906844 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 53829 4319 KTFEGNLTTK True NCI_RA007_Epitope_Rep4 1137.6029882567298 1137.60133490379 22.957 3 0.25589593859238213 0.00039635354736424893 0.0002642642313676689 ['ENSG00000174231|ENST00000304992|PRPF8'] 27812 18910 FQDDRYLYM True PC9_epitope_Rep1 1249.54375912845 1249.5426699358602 77.523 2 0.25587737284701145 0.00039635354736424893 0.00026437680568957883 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ROCK1|p.G236Lfs*5|1|0.06|ENSG00000067900|chr18:21042679-21042680|-/TCAA|frameshift_variant', 'ROCK1|p.G236Dfs*12|1|0.06|ENSG00000067900|chr18:21042678-21042679|-/AT|frameshift_variant', 'ROCK1|p.V266Yfs*8|1|0.19|ENSG00000067900|chr18:21042589-21042589|C/-|frameshift_variant', 'ENSG00000134318|ENST00000315872|ROCK2'] 66875 18677 LSNIFVIGK True PC9_epitope_Rep1 989.5909670210499 989.58986993586 76.631 2 0.25586730924609397 0.00039635354736424893 0.00026443784692203783 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 118062 13892 TYGEIFEKF True NCI_RA007_Epitope_Rep2 1132.54407639828 1132.54357496793 58.69 1 0.2558610112763528 0.00039635354736424893 0.0002644760547321429 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 110114 4209 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 21.297 2 0.2558424004036915 0.00039635354736424893 0.0002645889934055659 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 24887 20511 FAYDGKDYLTL True PC9_epitope_Rep5 1304.6288686513997 1304.6277699358602 83.937 2 0.2558277948150313 0.00039635354736424893 0.00026467766016817783 ['ENSG00000204592|ENST00000376630|HLA-E'] 27665 9637 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 41.997 2 0.2557796767281185 0.00039635354736424893 0.0002649699833966836 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 16865 6121 EFFNGKEPSR True NCI_RA007_Epitope_Rep1 1209.5778361380496 1209.57619490379 27.846 3 0.255719908176255 0.00039635354736424893 0.00026533353526410797 ['ENSG00000044574|ENST00000324460|HSPA5'] 41802 10255 IASPEGQDYLK True PC9_epitope_Rep4 1219.6084675599898 1219.60736993586 47.127 2 0.2557042659513119 0.00039635354736424893 0.00026542876413971836 ['ENSG00000100220|ENST00000216038|RTCB'] 140787 7998 YSDKYFDEHY True H1975_Epitope_Rep1 1365.55134660669 1365.54970490379 35.71 3 0.25568576220984324 0.00039635354736424893 0.0002655414579774388 ['ENSG00000123975|ENST00000314355|CKS2'] 94786 5341 RSNPYYIVK True NCI_RA007_Epitope_Rep5 1138.61349337078 1138.6123899358602 27.235 2 0.25567808924037555 0.00039635354736424893 0.0002655882029362347 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 2351 5291 AEQAERYDDM True H1975_Epitope_Rep2 1226.48736645114 1226.48626993586 25.41 2 0.2556600362797976 0.00039635354736424893 0.0002656982169966972 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 95146 7075 RVFSWSQAK True NCI_RA007_Epitope_Rep4 1107.58252759567 1107.5814299358601 33.837 2 0.2556030488926499 0.00039635354736424893 0.0002660457957348777 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 141414 12908 YTEPNYWIRY True H1975_Epitope_Rep1 1403.65100107831 1403.64990993586 54.724 2 0.2556026276378773 0.00039635354736424893 0.0002660483667574908 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 115758 6826 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 31.174 2 0.2555981505454918 0.00039635354736424893 0.0002660756931042879 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 71864 16651 MELQEIQLK True PC9_epitope_Rep5 1130.6005457285798 1130.59944993586 69.053 2 0.2555616559799881 0.00039635354736424893 0.0002662985460083427 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 24331 17485 EYVNDFDLLKF True NCI_RA007_Epitope_Rep4 1401.6816325002499 1401.68052993586 75.701 2 0.2555615600952996 0.00039635354736424893 0.0002662991317714876 ['ENSG00000204103|ENST00000373313|MAFB'] 142706 9239 YYQDTPKQI True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 40.485 2 0.2555303101986007 0.00039635354736424893 0.00026649010737210234 ['ENSG00000048162|ENST00000614830|NOP16'] 23491 4399 EVVEEAENGR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.5192899358601 21.748 2 0.2555253388797215 0.00039635354736424893 0.00026652050094536013 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 69563 9298 LVDEPQNLIK True H1975_Epitope_Rep3 1167.6499384491499 1167.6488499358602 40.759 2 0.2554826057515954 0.00039635354736424893 0.00026678190542688967 ['CON__P02769'] 120834 7550 VELQELNDR True H1975_Epitope_Rep3 1114.5618517207397 1114.56074993586 34.022 2 0.2554810369133136 0.00039635354736424893 0.00026679150711739533 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 95960 7944 RYLEQLHQL True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64422490379 38.355 3 0.25546644875822566 0.00039635354736424893 0.00026688080693465976 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 141825 18818 YVDDTQFVRF True PC9_epitope_Rep4 1288.60880191316 1288.6077099358602 80.469 2 0.2554230036675173 0.00039635354736424893 0.0002671469288756176 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 69630 14683 LVDPWTPHLY True H1975_Epitope_Rep1 1239.62880908175 1239.6277099358601 61.693 2 0.25540885663347734 0.00039635354736424893 0.00026723364361316707 ['ENSG00000010292|ENST00000315579|NCAPD2'] 49143 8459 KELEEIVQP True NCI_RA007_Epitope_Rep3 1083.5811901829898 1083.58008993586 40.355 2 0.2553948847850868 0.00039635354736424893 0.0002673193122345029 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000509378.1_1_4:165110937-165111516:+|nuORF'] 82942 4525 PSDPRYHEVHY True H1975_Epitope_Rep2 1398.63166261606 1398.63001490379 22.517 3 0.255394429947712 0.00039635354736424893 0.00026732210154003795 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 47953 19401 IYISTLKTEF True PC9_epitope_Rep2 1213.6594405036901 1213.65834993586 80.004 2 0.2553814013334201 0.00039635354736424893 0.0002674020123433013 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 48243 10252 IYQKAFEHL True PC9_epitope_Rep2 1147.6025943339098 1147.60093490379 44.767 3 0.25536278171632915 0.00039635354736424893 0.0002675162570368059 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 134235 16381 VYMELSQKL True PC9_epitope_Rep5 1109.57908200801 1109.5779899358602 68.006 2 0.25535922717699744 0.00039635354736424893 0.0002675380722433207 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 142708 7558 YYQDTPKQI True PC9_epitope_Rep6 1154.5607890915799 1154.5596899358602 38.345 2 0.2553305237821688 0.00039635354736424893 0.00026771429838890766 ['ENSG00000048162|ENST00000614830|NOP16'] 132271 6115 VTVVDVNESR True NCI_RA007_Epitope_Rep5 1116.5775017848798 1116.57640993586 30.201 2 0.25532819696647496 0.00039635354736424893 0.00026772858910493455 ['nc|ENSG00000109814|O60701-2|UGDH', 'ENSG00000109814|ENST00000316423|UGDH'] 4781 17203 ALDTM[Oxidation]NFDVIK True PC9_epitope_Rep5 1281.62748913285 1281.62638993586 71.191 2 0.2552990377815584 0.00039635354736424893 0.0002679077423192586 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 95406 19821 RWFDKSFTF True PC9_epitope_Rep2 1232.59784330664 1232.59674993586 81.631 2 0.25529279552759193 0.00039635354736424893 0.00026794611016474535 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 73380 7723 MTERQDLVY True H1975_Epitope_Rep2 1153.5437591284497 1153.5426699358602 34.658 2 0.25528931850483405 0.00039635354736424893 0.00026796748397947204 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 3503 10216 [Acetylation]-AGLNSLEAVKR True NCI_RA007_Epitope_Rep1 1198.66698581192 1198.6658899358602 43.749 2 0.2552814553966562 0.00039635354736424893 0.0002680158260647804 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 22276 12230 ETDEKDFYLY True H1975_Epitope_Rep2 1321.5714133449299 1321.57030993586 52.127 2 0.2552343934519225 0.00039635354736424893 0.00026830534386168537 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 108530 15173 SYM[Oxidation]LVNENRF True PC9_epitope_Rep5 1287.59177233047 1287.5906699358602 63.371 2 0.2552175827035864 0.00039635354736424893 0.0002684088369499104 ['ENSG00000182195|ENST00000370526|LDOC1'] 127495 6719 VNLPINGNGKQ True NCI_RA007_Epitope_Rep5 1152.62512068364 1152.62402993586 32.517 2 0.25520294189556336 0.00039635354736424893 0.00026849900369370214 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 134768 12149 VYTTTVHWL True NCI_RA007_Epitope_Rep3 1118.5760452329 1118.57494993586 54.904 2 0.2551993136498697 0.00039635354736424893 0.00026852135326752984 ['ENSG00000174231|ENST00000304992|PRPF8'] 89559 20382 QYMELFNKI True PC9_epitope_Rep5 1184.5899810448798 1184.5888899358602 83.435 2 0.25518524294095773 0.00039635354736424893 0.0002686080448461123 ['ENSG00000124641|ENST00000265350|MED20'] 72663 5168 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 24.954 2 0.25516077168788603 0.00039635354736424893 0.0002687588824377504 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 42949 14910 IESLIAVFQK True NCI_RA007_Epitope_Rep2 1146.6648602373 1146.66376993586 62.673 2 0.2551067357564569 0.00039635354736424893 0.000269092253610516 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 142844 19687 YYTDIMHTL True PC9_epitope_Rep2 1155.5270464351497 1155.5259499358601 81.112 2 0.25508305905848616 0.00039635354736424893 0.0002692384560247014 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 2385 4640 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 22.947 2 0.2550757128690709 0.00039635354736424893 0.00026928383455538676 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 17595 9567 EHINEGETAM[Oxidation]L True PC9_epitope_Rep5 1258.5499670881397 1258.54886993586 41.76 2 0.2550405488378192 0.00039635354736424893 0.00026950115432585446 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 6446 14817 APSDLYQIILK True H1975_Epitope_Rep3 1259.7125387057101 1259.7114499358602 62.374 2 0.25501256712764364 0.00039635354736424893 0.00026967421170767046 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953662-64954841:+|nuORF'] 32345 20903 GFGFVTFDDHD True PC9_epitope_Rep1 1255.51456717515 1255.51346993586 85.225 2 0.2550030660431894 0.00039635354736424893 0.0002697329980184438 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 15270 6855 EAESSPFVER True NCI_RA007_Epitope_Rep2 1149.5302172392899 1149.52912993586 31.28 2 0.25499151048358576 0.00039635354736424893 0.00026980451334901874 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 88549 8195 QTDDTWRTEY True H1975_Epitope_Rep1 1313.55240923585 1313.5513099358602 36.462 2 0.25497630292240786 0.00039635354736424893 0.000269898659241291 ['ENSG00000121741|ENST00000610343|ZMYM2'] 130169 6053 VSEEDVSSRY True H1975_Epitope_Rep2 1169.52004647841 1169.51894993586 28.26 2 0.2549648744331479 0.00039635354736424893 0.00026996943159298125 ['ENSG00000177425|ENST00000328827|PAWR'] 107833 10752 SVVDHFNRI True PC9_epitope_Rep2 1085.56179215109 1085.5606899358602 46.676 2 0.254935023770392 0.00039635354736424893 0.00027015437331806915 ['ENSG00000103035|ENST00000219313|PSMD7', 'ENST00000566015.1_1_16:74330767-74334139:+|nuORF', 'ENST00000422197.2_1_1:51837944-51838202:+|nuORF'] 140888 10217 YSEDLSDMHY True H1975_Epitope_Rep3 1258.48121844154 1258.48012993586 44.347 2 0.2548900174655348 0.00039635354736424893 0.0002704334529069005 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 140789 8194 YSDKYFDEHY True H1975_Epitope_Rep2 1365.55134660669 1365.54970490379 36.471 3 0.2548647000739546 0.00039635354736424893 0.0002705905704963684 ['ENSG00000123975|ENST00000314355|CKS2'] 120650 5749 VEILANDQGNR True NCI_RA007_Epitope_Rep4 1227.6207635791898 1227.6196699358602 28.733 2 0.25481804442893646 0.00039635354736424893 0.00027088035118711556 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 130164 10515 VSEDSSVTQIY True H1975_Epitope_Rep2 1226.56666231766 1226.5655699358601 45.466 2 0.2548003182965968 0.00039635354736424893 0.00027099053066055687 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 35486 10271 GSLNWVPVTK True NCI_RA007_Epitope_Rep3 1099.6025943339098 1099.6014899358602 47.474 2 0.2547984145630526 0.00039635354736424893 0.000271002366277002 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE', 'chr1:206016145-206021049|372|16.44|0.89|4.2|-|ENST00000360218|CTSE,CTSE'] 7878 10560 [Acetylation]-ATAEVLNIGKK True NCI_RA007_Epitope_Rep1 1184.6764878664596 1184.67538993586 45.061 2 0.2547405626646545 0.00039635354736424893 0.00027136228193954797 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 120544 12551 VEFTRSLFVN True NCI_RA007_Epitope_Rep5 1210.6346227381798 1210.63352993586 54.931 2 0.254717069304365 0.00039635354736424893 0.00027150857860532126 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 15473 8145 EALQDVEDENQ True NCI_RA007_Epitope_Rep2 1288.5419041218 1288.5408099358601 36.317 2 0.2546861854538017 0.00039635354736424893 0.00027170101723707847 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 32255 19815 GFAFVQYVNER True PC9_epitope_Rep3 1328.65133543148 1328.6502299358601 81.451 2 0.2546776977855867 0.00039635354736424893 0.00027175392821648817 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant'] 43072 13978 IEVIEIMTDR True NCI_RA007_Epitope_Rep1 1217.63257413285 1217.6314699358602 58.397 2 0.2546544288947195 0.00039635354736424893 0.0002718990363198952 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 53287 14706 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6745149037902 61.835 3 0.2546407634246856 0.00039635354736424893 0.00027198429232551196 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 90245 7732 REEEEKLLHLA True H1975_Epitope_Rep3 1365.7252286477299 1365.72358490379 34.724 3 0.254574739659087 0.00039635354736424893 0.00027239657839211865 ['ENSG00000096401|ENST00000371477|CDC5L', 'CDC5L|p.L387Cfs*9|1|0.66|ENSG00000096401|chr6:44419515-44419515|T/-|frameshift_variant'] 35698 16908 GTFATLSELH True PC9_epitope_Rep1 1074.53457434374 1074.53346993586 69.861 2 0.254557538247259 0.00039635354736424893 0.0002725040956056808 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 138611 8362 YIDQGRNPQLY True H1975_Epitope_Rep2 1365.66771377161 1365.6666099358602 37.117 2 0.2545492268413108 0.00039635354736424893 0.00027255606118774137 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 118283 22687 TYLPREILNLI True PC9_epitope_Rep5 1343.7812869718698 1343.78018993586 92.269 2 0.2545305132948774 0.00039635354736424893 0.00027267310065888056 ['ENSG00000163428|ENST00000295628|LRRC58'] 53709 7948 KSIDFPLTK True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 37.318 2 0.25452851173208463 0.00039635354736424893 0.0002726856219440705 ['ENSG00000084073|ENST00000372759|ZMPSTE24'] 113888 5455 TNQELQEINR True H1975_Epitope_Rep1 1243.61567819875 1243.61458993586 26.043 2 0.25450745674929154 0.00039635354736424893 0.0002728173716683076 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 45954 15671 ISEQFTAM[Oxidation]FR True PC9_epitope_Rep1 1244.58595867404 1244.58486993586 65.1 2 0.25448782386451513 0.00039635354736424893 0.0002729402802237817 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 109474 15727 TDLLLEPYNK True PC9_epitope_Rep4 1204.6339540318397 1204.6328499358601 68.419 2 0.25446804939688134 0.00039635354736424893 0.0002730641312406132 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 54181 5416 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61116490379 27.522 3 0.25445540304367703 0.00039635354736424893 0.0002731433671367303 ['ENSG00000057608|ENST00000380191|GDI2'] 14309 4979 DSYESYGNSR True NCI_RA007_Epitope_Rep2 1176.4683452587199 1176.46724993586 23.99 2 0.25444482890309345 0.00039635354736424893 0.0002732096372476613 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 57879 13457 LEFLNRFEEA True H1975_Epitope_Rep3 1266.6244519773002 1266.62334993586 57.035 2 0.2544226206878014 0.00039635354736424893 0.0002733488727476164 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 95298 6481 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.6641699358602 31.596 2 0.2544220656447196 0.00039635354736424893 0.0002733523535284354 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 46029 9356 ISGLIYEETR True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61244993586 42.63 2 0.2544168503205465 0.00039635354736424893 0.00027338506198913953 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 22409 4831 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56272993586 23.672 2 0.25441660037103675 0.00039635354736424893 0.00027338662967260494 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 139164 8227 YLDYHMEKY True H1975_Epitope_Rep1 1260.5485101557201 1260.54740993586 36.588 2 0.2543907332416297 0.00039635354736424893 0.00027354891705168554 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 138613 8324 YIDQGRNPQLY True H1975_Epitope_Rep3 1365.66771377161 1365.6666099358602 37.001 2 0.25438611007459044 0.00039635354736424893 0.0002735779324370854 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 103169 11683 SPIENIQRVA True PC9_epitope_Rep4 1125.6142216467701 1125.6131299358601 52.7 2 0.2543442291663849 0.00039635354736424893 0.0002738409211352416 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 98152 4143 SESPKEPEQLR True NCI_RA007_Epitope_Rep2 1298.64664397386 1298.6449949037901 20.754 3 0.2543059442188314 0.00039635354736424893 0.0002740815509072208 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 22311 13335 ETDLLDIRSEY True H1975_Epitope_Rep2 1352.64597526752 1352.64486993586 56.425 2 0.2543058027105606 0.00039635354736424893 0.0002740824407125405 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 103167 13117 SPIENIQRVA True PC9_epitope_Rep3 1125.6142216467701 1125.6131299358601 55.476 2 0.25427888129340526 0.00039635354736424893 0.000274251775520144 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 77581 10883 NTDPWAGYRY True H1975_Epitope_Rep1 1241.5465360097699 1241.54542993586 46.821 2 0.2542695911869258 0.00039635354736424893 0.00027431023431143174 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 67946 11434 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 49.033 2 0.2542618266640709 0.00039635354736424893 0.000274359102818979 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 98365 10905 SEYLRYEDTL True H1975_Epitope_Rep3 1287.59829679911 1287.5971899358601 47.033 2 0.25423872430125466 0.00039635354736424893 0.000274504556542766 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 133768 15638 VYENVSHFL True PC9_epitope_Rep6 1106.53965972418 1106.53856993586 72.354 2 0.25422332662873 0.00039635354736424893 0.00027460154404473496 ['ENSG00000164933|ENST00000297578|SLC25A32'] 133726 19534 VYDPSLKTLL True PC9_epitope_Rep2 1147.64887581999 1147.6477699358602 80.521 2 0.25421842732066685 0.00039635354736424893 0.0002746324112134735 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 109821 6970 TEEGPTLSYGR True H1975_Epitope_Rep3 1208.567331024 1208.56622993586 31.772 2 0.25421630930734895 0.00039635354736424893 0.0002746457564346493 ['ENSG00000015479|ENST00000394805|MATR3'] 73366 15099 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.54634993586 63.232 2 0.2542156351051549 0.00039635354736424893 0.00027465000459786395 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 55813 6113 LAPEYEAAATR True H1975_Epitope_Rep1 1190.59315184902 1190.5920499358601 28.582 2 0.25418211642209665 0.00039635354736424893 0.00027486128963212465 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 21973 11171 ESENVVCHFY True H1975_Epitope_Rep2 1225.50737361973 1225.50626993586 48.006 2 0.25415012377459745 0.00039635354736424893 0.0002750631072650142 ['ENST00000463385.5_1_2:99938416-99949470:-|nuORF', 'nc|ENSG00000115514|O14530-2|TXNDC9', 'ENSG00000115514|ENST00000264255|TXNDC9'] 58508 8126 LEQERILNP True H1975_Epitope_Rep2 1110.6033226099 1110.6022299358601 36.207 2 0.2541331522798532 0.00039635354736424893 0.0002751702279949104 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 88868 13221 QVDPLSALKY True H1975_Epitope_Rep2 1132.6128246644398 1132.61172993586 55.983 2 0.2541291276439929 0.00039635354736424893 0.0002751956368365419 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 32346 20596 GFGFVTFDDHD True PC9_epitope_Rep2 1255.51456717515 1255.51346993586 84.654 2 0.25412089330048304 0.00039635354736424893 0.00027524763026690724 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 31244 11714 GDEELDSLIK True NCI_RA007_Epitope_Rep1 1117.5502839775297 1117.54918993586 49.541 2 0.2540788227173761 0.00039635354736424893 0.0002755134267589119 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 133938 9155 VYIKHPVSL True PC9_epitope_Rep2 1054.61751612206 1054.61640993586 40.553 2 0.25404689289572946 0.00039635354736424893 0.0002757153269512282 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 24182 21245 EYQKVWNLF True PC9_epitope_Rep1 1225.6131590176099 1225.61206993586 86.543 2 0.25403690209700935 0.00039635354736424893 0.00027577853171014555 ['ENSG00000059378|ENST00000263549|PARP12'] 84406 11714 QADIARMLY True H1975_Epitope_Rep3 1079.54336520563 1079.54226993586 50.198 2 0.2540297344559402 0.00039635354736424893 0.000275823885282673 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 2399 7774 AEQEPQPERLV True H1975_Epitope_Rep3 1294.6517293542997 1294.65062993586 34.887 2 0.25402820575655255 0.00039635354736424893 0.00027583355916435063 ['ENSG00000124217|ENST00000244051|MOCS3'] 9327 3967 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 21.618 2 0.2539841434516847 0.00039635354736424893 0.00027611253949026075 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 8024 7871 ATDLTREVY True H1975_Epitope_Rep3 1066.5294889632999 1066.52838993586 35.251 2 0.25395393750528833 0.00039635354736424893 0.0002763039517183363 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 97902 5958 SEM[Oxidation]EVQDAELK True NCI_RA007_Epitope_Rep1 1293.5758474828096 1293.5747499358602 27.222 2 0.25393021791674314 0.00039635354736424893 0.0002764543537382602 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF', 'ENST00000418595.1_1_6:112937907-112938114:-|nuORF'] 70313 8146 LVSESSDVLPK True NCI_RA007_Epitope_Rep1 1172.6288686514001 1172.6277699358602 35.685 2 0.2538837357869507 0.00039635354736424893 0.0002767493273202618 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 69524 8886 LVDAFVEHRY True H1975_Epitope_Rep2 1247.62987171091 1247.62822490379 39.15 3 0.253880340337381 0.00039635354736424893 0.00027677088705652743 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 92855 10994 RPFEDQTSL True PC9_epitope_Rep2 1091.52473793603 1091.52364993586 47.609 2 0.2538770134321064 0.00039635354736424893 0.00027679201319708095 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 44 13185 [Acetylation]-AAAAVVEFQR True H1975_Epitope_Rep1 1102.5771081783598 1102.5760099358602 55.812 2 0.2538747122656237 0.00039635354736424893 0.0002768066267519416 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 70183 11444 LVQAFQFTDK True NCI_RA007_Epitope_Rep1 1195.62372370131 1195.62262993586 48.479 2 0.2538405281912848 0.00039635354736424893 0.000277023803771749 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 69675 13362 LVDTFLEDVK True NCI_RA007_Epitope_Rep1 1177.6230549949698 1177.6219499358601 55.979 2 0.25382931292946864 0.00039635354736424893 0.00027709509336983155 ['CON__P34955'] 70017 12183 LVMEEAPESYK True PC9_epitope_Rep1 1294.6115043350999 1294.6104099358602 51.72 2 0.2538224902944484 0.00039635354736424893 0.00027713847031522986 ['ENSG00000100220|ENST00000216038|RTCB'] 119139 11859 VAIEHLDKI True PC9_epitope_Rep5 1036.59169529704 1036.5905899358602 50.613 2 0.2538039706002396 0.00039635354736424893 0.00027725624913432973 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 67954 15263 LTDDHVQFLIY True H1975_Epitope_Rep2 1362.6819668534201 1362.68086993586 63.868 2 0.2537904629736771 0.00039635354736424893 0.00027734218458648973 ['nc|ENSG00000112062|Q16539-5|MAPK14', 'nc|ENSG00000112062|Q16539-3|MAPK14', 'nc|ENSG00000112062|Q16539-4|MAPK14', 'nc|ENSG00000112062|Q16539-2|MAPK14', 'ENSG00000112062|ENST00000229794|MAPK14'] 27705 6953 FPLTTESAM[Oxidation]K True NCI_RA007_Epitope_Rep5 1139.55326156343 1139.55216993586 33.429 2 0.25378123504243794 0.00039635354736424893 0.00027740090798843386 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF'] 37757 21460 GWYDEEHPLVF True PC9_epitope_Rep5 1390.6193665968601 1390.61826993586 87.587 2 0.2537511099495823 0.00039635354736424893 0.0002775927005596967 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 35909 8242 GTQSFVFQR True NCI_RA007_Epitope_Rep3 1068.5352430500798 1068.5341499358601 39.553 2 0.25375018557729845 0.00039635354736424893 0.0002775985877130626 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1'] 41803 11358 IASPEGQDYLK True PC9_epitope_Rep5 1219.6084675599898 1219.60736993586 48.684 2 0.2537474486547424 0.00039635354736424893 0.0002776160193923594 ['ENSG00000100220|ENST00000216038|RTCB'] 140808 12196 YSDLHAFYY True H1975_Epitope_Rep1 1177.5080252427301 1177.5069299358602 51.931 2 0.25367474208682883 0.00039635354736424893 0.00027807949530366785 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 22380 15837 ETEEDKFLLLY True H1975_Epitope_Rep3 1398.6918628307799 1398.69076993586 66.364 2 0.2536698927137468 0.00039635354736424893 0.00027811043573570173 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 24287 18240 EYTPRSWNF True PC9_epitope_Rep1 1198.54072235334 1198.5396299358601 74.952 2 0.25363545347990374 0.00039635354736424893 0.00027833026751313136 ['ENSG00000156671|ENST00000542569|SAMD8'] 89576 6279 QYNPHVHQL True PC9_epitope_Rep1 1134.55704112382 1134.55594993586 28.965 2 0.2536327349802953 0.00039635354736424893 0.00027834762759685076 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 5620 6561 [Acetylation]-ANRGPAYGLSR True NCI_RA007_Epitope_Rep5 1202.6156189453998 1202.6145299358602 31.899 2 0.2536141329593126 0.00039635354736424893 0.00027846644748690295 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 140829 4518 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 22.499 2 0.25360558605082706 0.00039635354736424893 0.00027852105767176683 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 118245 13038 TYLEKAIKI True PC9_epitope_Rep2 1077.6433965167298 1077.6422899358602 55.431 2 0.2536054593916094 0.00039635354736424893 0.00027852186703730474 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 106206 13029 STDVSDLLHQY True H1975_Epitope_Rep2 1276.5935457718401 1276.59244993586 55.236 2 0.2535963191398699 0.00039635354736424893 0.00027858028041818174 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 59308 11029 LFHPEQLITGK True NCI_RA007_Epitope_Rep2 1281.7081220316097 1281.70648490379 47.501 3 0.25359542773281296 0.00039635354736424893 0.0002785859778659244 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 73576 9565 M[Oxidation]VVESAYEVIK True H1975_Epitope_Rep3 1282.64789022426 1282.6467899358602 41.8 2 0.253568555257601 0.00039635354736424893 0.0002787577887256625 ['ENSG00000111716|ENST00000350669|LDHB'] 134344 9896 VYPDGIRHI True PC9_epitope_Rep5 1068.5716285587998 1068.5705299358601 43.035 2 0.253544212406835 0.00039635354736424893 0.0002789135179574503 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 42266 18418 IDTIEIITDR True PC9_epitope_Rep2 1187.63976768827 1187.6386699358602 76.175 2 0.2535271865464418 0.00039635354736424893 0.00027902248981715073 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 113951 8806 TPAEVGVLVGK True H1975_Epitope_Rep3 1068.6179100448796 1068.6168099358601 38.879 2 0.25351516659987927 0.00039635354736424893 0.00027909944765957715 ['ENSG00000108518|ENST00000225655|PFN1'] 24083 19073 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5797699358602 78.154 2 0.2535032922284143 0.00039635354736424893 0.00027917549434760137 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 10131 13734 AYVHMVTHF True PC9_epitope_Rep1 1103.52223583823 1103.52112993586 57.674 2 0.2534999441021344 0.00039635354736424893 0.00027919694040789956 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 46677 9329 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 40.845 2 0.2534547362269629 0.00039635354736424893 0.00027948667629764653 ['ENSG00000170348|ENST00000303575|TMED10'] 22309 13338 ETDLLDIRSEY True H1975_Epitope_Rep1 1352.64597526752 1352.64486993586 56.412 2 0.25343266819053306 0.00039635354736424893 0.00027962821912021804 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 32347 19890 GFGFVTFDDHD True PC9_epitope_Rep4 1255.51456717515 1255.51346993586 84.639 2 0.2534296645608875 0.00039635354736424893 0.00027964748974276246 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 115895 11891 TSETPDYLLKY True H1975_Epitope_Rep2 1328.6499980188 1328.64890993586 50.82 2 0.253424437720554 0.00039635354736424893 0.0002796810271666205 ['ENSG00000105656|ENST00000262809|ELL'] 103145 10742 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 46.637 2 0.2534242197345796 0.00039635354736424893 0.0002796824259362958 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 24175 15888 EYQKVWNLF True NCI_RA007_Epitope_Rep1 1225.6131590176099 1225.61206993586 65.899 2 0.2534007320762963 0.00039635354736424893 0.0002798331823398648 ['ENSG00000059378|ENST00000263549|PARP12'] 116271 11835 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 50.67 2 0.25339718121823296 0.00039635354736424893 0.0002798559807407974 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 66182 8808 LSERADWQY True H1975_Epitope_Rep2 1166.5356369729 1166.53452993586 38.846 2 0.25335083993461915 0.00039635354736424893 0.0002801536872403006 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 71092 21769 LYLGLFNRL True PC9_epitope_Rep5 1107.6440652230701 1107.64296993586 88.763 2 0.253339154425122 0.00039635354736424893 0.0002802288076033649 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 28860 7372 FTDEEGYGRY True H1975_Epitope_Rep1 1235.50948179471 1235.5083899358601 33.362 2 0.2532778345842235 0.00039635354736424893 0.0002806233336423447 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 54677 17885 KYLSVQGQLF True PC9_epitope_Rep4 1181.64445914589 1181.6433699358602 76.834 2 0.25326043220748184 0.00039635354736424893 0.00028073540027700474 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 73379 7595 MTERQDLVY True H1975_Epitope_Rep2 1153.5437591284497 1153.5426699358602 34.166 2 0.2532502890235856 0.00039635354736424893 0.0002808007403516371 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 138575 10002 YIDEQFERY True H1975_Epitope_Rep2 1261.5615173675699 1261.5604299358602 43.462 2 0.25324840406066845 0.00039635354736424893 0.00028081288453193426 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 72931 13784 MPWGDPNYRSA True PC9_epitope_Rep4 1292.5608061749201 1292.5597099358602 60.916 2 0.25322740525285287 0.00039635354736424893 0.00028094820837482927 ['ENSG00000124226|ENST00000244061|RNF114'] 106132 7855 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58082993586 35.19 2 0.25322247287001404 0.00039635354736424893 0.00028098000389690695 ['ENSG00000168090|ENST00000303904|COPS6'] 43957 12184 IIDYLTDHY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 51.947 2 0.25320225285898695 0.00039635354736424893 0.00028111038546137777 ['ENSG00000105865|ENST00000265720|DUS4L', 'nc|ENSG00000288558|O95620-2|DUS4L', 'ENST00000485825.1_1_7:107215546-107218002:+|nuORF'] 40969 4656 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.60641490379 23.007 3 0.25318898741702145 0.00039635354736424893 0.00028119595589873265 ['nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 39413 3455 HKSETDTSLIR True NCI_RA007_Epitope_Rep4 1285.66262839117 1285.66099490379 19.218 3 0.2531845239421245 0.00039635354736424893 0.00028122475398730895 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 137050 14486 YALYDATYETK True PC9_epitope_Rep5 1336.61869789052 1336.6176099358602 60.722 2 0.2531698055988383 0.00039635354736424893 0.0002813197368583646 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 59987 3507 LGIHEDSQNR True NCI_RA007_Epitope_Rep2 1167.56324870307 1167.56161490379 18.293 3 0.25316125794642974 0.00039635354736424893 0.0002813749127563568 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 132497 12161 VVDLLAPYAK True H1975_Epitope_Rep1 1087.62774645259 1087.62664993586 51.795 2 0.253145581953541 0.00039635354736424893 0.00028147613095231763 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 116347 8145 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 36.28 2 0.2531050729216207 0.00039635354736424893 0.00028173786246122603 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 35665 8800 GTDWGEKGYY True H1975_Epitope_Rep3 1174.4931034545798 1174.49200993586 38.855 2 0.253081778589617 0.00039635354736424893 0.00028188847913037003 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000527141.5_1_11:66331406-66331633:-|nuORF'] 95428 21571 RWFQPAIPSW True PC9_epitope_Rep3 1286.6560268890996 1286.65492993586 88.267 2 0.2530808573181424 0.00039635354736424893 0.00028189443755340663 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 10929 16093 DAELVAQWNY True H1975_Epitope_Rep2 1207.5509526838698 1207.54984993586 67.111 2 0.2530215771288846 0.00039635354736424893 0.00028227810414341016 ['ENSG00000022277|ENST00000357348|RTF2'] 134027 10170 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5287299358602 44.106 2 0.2530037316267663 0.00039635354736424893 0.0002823937042736156 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 52679 14893 KLVILEGELER True PC9_epitope_Rep2 1297.7605515272899 1297.7589149037901 62.552 3 0.25297660279251816 0.00039635354736424893 0.0002825695311653524 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 133728 18820 VYDPSLKTLL True PC9_epitope_Rep4 1147.64887581999 1147.6477699358602 80.476 2 0.2529119128942093 0.00039635354736424893 0.0002829892410837108 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 48918 12787 KEEDVLKFLAA True H1975_Epitope_Rep1 1261.69180326113 1261.69070993586 54.248 2 0.25291073032486017 0.00039635354736424893 0.00028299691944115883 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 10135 12400 AYVHMVTHF True PC9_epitope_Rep2 1103.52223583823 1103.52112993586 53.005 2 0.25288250786543404 0.00039635354736424893 0.0002831802282895128 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 98155 3822 SESPKEPEQLR True NCI_RA007_Epitope_Rep4 1298.64664397386 1298.6449949037901 20.89 3 0.25284515355486015 0.00039635354736424893 0.00028342303283411047 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 87944 20533 QRLINLVGESL True PC9_epitope_Rep1 1240.7139356880398 1240.71282993586 83.792 2 0.25283939006623424 0.00039635354736424893 0.0002834605143248885 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 14288 16370 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep2 1204.6485589305998 1204.64746993586 68.402 2 0.25283911769718903 0.00039635354736424893 0.00028346228573577196 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 39472 9031 HLDEAQRLLY True H1975_Epitope_Rep2 1256.65133543148 1256.6496749037901 39.689 3 0.25283025741221543 0.00039635354736424893 0.0002835199165641973 ['ENST00000600421.1_1_19:57901368-57922291:+|nuORF', 'nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547', 'nc|ENSG00000188785|Q8NEK5|ZNF548', 'ENSG00000188785|ENST00000336128|ZNF548'] 70309 7549 LVSESSDVLPK True H1975_Epitope_Rep1 1172.6288686514001 1172.6277699358602 34.03 2 0.2528006411110814 0.00039635354736424893 0.0002837126380613853 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 70464 11714 LVTYVPVTTFK True NCI_RA007_Epitope_Rep3 1266.72237511342 1266.7212699358602 53.189 2 0.2527947531364765 0.00039635354736424893 0.0002837509683935878 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 46039 12780 ISGLIYEETR True PC9_epitope_Rep4 1179.6135529404298 1179.61244993586 57.02 2 0.25277310733762737 0.00039635354736424893 0.0002838919257642419 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 137144 16234 YAVEGRDLTL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 67.689 2 0.2527543944129412 0.00039635354736424893 0.00028401384083782065 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 24045 15015 EYNNNFHVL True PC9_epitope_Rep2 1148.5250722892001 1148.5239699358601 63.009 2 0.2527407591732357 0.00039635354736424893 0.00028410270774561314 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 107979 5569 SVYYNEATGGK True NCI_RA007_Epitope_Rep2 1187.5458673034298 1187.5447699358601 26.278 2 0.25274071775385026 0.00039635354736424893 0.0002841029777365876 ['ENSG00000196230|ENST00000327892|TUBB'] 107423 14816 SVLQLGNIVFK True NCI_RA007_Epitope_Rep3 1216.71795843932 1216.7168699358601 65.705 2 0.2527407004247758 0.00039635354736424893 0.00028410309069569587 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 9758 11043 AYIERMNYI True NCI_RA007_Epitope_Rep5 1171.5695799534699 1171.56848993586 49.112 2 0.2527339113477514 0.00039635354736424893 0.00028414734857693555 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 104059 7183 SQDPNRVEL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 34.931 2 0.252730654287198 0.00039635354736424893 0.0002841685837541445 ['ENSG00000080200|ENST00000389622|CRYBG3'] 28976 16241 FTDVPSIQIY True H1975_Epitope_Rep2 1181.5968402471299 1181.59574993586 67.679 2 0.25272749359711655 0.00039635354736424893 0.0002841891921421682 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2'] 54961 6217 KYQEVTNNL True NCI_RA007_Epitope_Rep5 1107.5560380643099 1107.5549499358601 30.59 2 0.25269530399570966 0.00039635354736424893 0.00028439916070233714 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 54410 14635 KYFLKPEVL True PC9_epitope_Rep2 1135.6641319613097 1135.66302993586 61.562 2 0.25262463773130317 0.00039635354736424893 0.00028486065309246943 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 21055 9449 EQVANSAFVER True PC9_epitope_Rep3 1248.6098645423197 1248.6087699358602 41.287 2 0.25261660560764804 0.00039635354736424893 0.00028491315508665644 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 12887 12956 DLINNLGTIAK True H1975_Epitope_Rep1 1170.66083748602 1170.6597499358602 54.91 2 0.2526083126995788 0.00039635354736424893 0.00028496737187639156 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 27830 12395 FQDEVAKAQQL True PC9_epitope_Rep1 1275.64591569787 1275.6448099358602 52.538 2 0.2525698687947025 0.00039635354736424893 0.000285218842858783 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 24080 12237 EYPDRIMNTF True NCI_RA007_Epitope_Rep4 1284.5808729131597 1284.5797699358602 54.066 2 0.2525563245602264 0.00039635354736424893 0.00028530749199061204 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 8461 13273 ATQLAADLLKY True H1975_Epitope_Rep2 1205.66558851329 1205.66448993586 56.184 2 0.2525328254551654 0.00039635354736424893 0.00028546136284329267 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1'] 9852 18547 AYLESFYKF True PC9_epitope_Rep6 1166.5648118428599 1166.56370993586 83.981 2 0.25250717507311693 0.00039635354736424893 0.0002856294151010108 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 23430 8623 EVTEFEDIK True H1975_Epitope_Rep1 1108.5288202569598 1108.5277299358602 38.095 2 0.2524913075018479 0.00039635354736424893 0.00028573342347981766 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 54383 10370 KYFDEHYEY True PC9_epitope_Rep6 1292.53496826656 1292.5338699358601 50.609 2 0.25248464777462515 0.00039635354736424893 0.00028577708781182576 ['ENSG00000123975|ENST00000314355|CKS2'] 57646 10580 LEEELGRDWQA True H1975_Epitope_Rep2 1344.6309939097198 1344.62988993586 45.718 2 0.2524750017261075 0.00039635354736424893 0.00028584034374408445 ['nc|ENSG00000123815|Q96D53-2|COQ8B', 'ENSG00000123815|ENST00000324464|COQ8B'] 78395 20543 NYLHLDYNF True PC9_epitope_Rep5 1197.5454733806098 1197.54436993586 84.063 2 0.2524735115766622 0.00039635354736424893 0.00028585011695480677 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 26949 10676 FLDSTGSRLDY True H1975_Epitope_Rep2 1272.59863115228 1272.5975299358602 46.089 2 0.2524511266489637 0.00039635354736424893 0.0002859969698056508 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 54740 11384 KYMEDYHQF True PC9_epitope_Rep1 1259.52810906431 1259.5270099358602 48.669 2 0.2523955585842341 0.00039635354736424893 0.0002863618424622469 ['ENSG00000118898|ENST00000345988|PPL'] 98154 3743 SESPKEPEQLR True NCI_RA007_Epitope_Rep4 1298.64664397386 1298.6449949037901 20.545 3 0.25238886290680596 0.00039635354736424893 0.0002864058393055538 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 99364 10397 [Acetylation]-SHTILLVQPTK True NCI_RA007_Epitope_Rep1 1277.7343370957499 1277.7332299358602 44.424 2 0.25237564473028823 0.00039635354736424893 0.00028649271494288414 ['ENSG00000100632|ENST00000557016|ERH'] 70844 21458 LYDIILKNF True PC9_epitope_Rep1 1137.64339651673 1137.6422899358602 87.379 2 0.2523415337907682 0.00039635354736424893 0.00028671702902264824 ['ENSG00000092010|ENST00000206451|PSME1'] 22257 6487 ETAMVTADSKY True H1975_Epitope_Rep2 1214.54890407854 1214.5478099358602 29.868 2 0.2523401995024795 0.00039635354736424893 0.00028672580690081395 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 78423 11635 NYLSHHLTI True PC9_epitope_Rep4 1096.5665431783602 1096.5654499358602 52.51 2 0.2523314423640693 0.00039635354736424893 0.0002867834241462078 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 90941 10137 REYQELMSV True NCI_RA007_Epitope_Rep5 1153.54375912845 1153.5426699358602 45.626 2 0.2523238294274462 0.00039635354736424893 0.0002868335225919898 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 137749 7134 YENEVALRQ True PC9_epitope_Rep4 1120.5512870370399 1120.55018993586 34.715 2 0.2522992888637545 0.00039635354736424893 0.00028699507638928917 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 3809 8581 AGVEGSLIVEK True NCI_RA007_Epitope_Rep2 1100.607739284 1100.60664993586 38.022 2 0.2522967279444528 0.00039635354736424893 0.0002870119405170723 ['ENSG00000144381|ENST00000388968|HSPD1'] 92136 5507 RLDTDHLRY True H1975_Epitope_Rep3 1187.60471959223 1187.60308490379 26.234 3 0.252296716026839 0.00039635354736424893 0.0002870120189990876 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'ARAP1|p.F360Lfs*31|1|0.27|ENSG00000186635|chr11:72711442-72711442|A/-|frameshift_variant'] 2375 12193 AEQDFWRAV True H1975_Epitope_Rep3 1120.53015766964 1120.5290699358602 52.072 2 0.2522441549670766 0.00039635354736424893 0.0002873583629136588 ['ENSG00000135148|ENST00000412615|TRAFD1'] 38404 7164 HEMFPAVHAA True H1975_Epitope_Rep3 1108.5123994305197 1108.51130993586 32.531 2 0.2522191775356097 0.00039635354736424893 0.0002875230951055318 ['ENSG00000113638|ENST00000337702|TTC33'] 78674 11980 NYYEQWGK True PC9_epitope_Rep1 1086.47705946762 1086.4759699358601 50.943 2 0.2522176241343528 0.00039635354736424893 0.00028753334328821255 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 2374 7627 AEQDELSQRLA True H1975_Epitope_Rep3 1258.61534384558 1258.61424993586 34.319 2 0.25221466423621874 0.00039635354736424893 0.00028755287150165903 ['ENSG00000255112|ENST00000526991|CHMP1B'] 98412 11545 SFELFADKVPK True NCI_RA007_Epitope_Rep1 1279.68123857743 1279.67959490379 48.876 3 0.25218133182407093 0.00039635354736424893 0.00028777287711833185 ['ENSG00000196262|ENST00000468812|PPIA'] 11469 11024 DFEQPLAISR True H1975_Epitope_Rep1 1174.59823722946 1174.5971499358602 47.364 2 0.2521711718285459 0.00039635354736424893 0.000287839970203175 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'PDLIM1-SORBS1|11|fusion', 'PDLIM1-SORBS1|9|fusion', 'PDLIM1-SORBS1|7|fusion', 'PDLIM1-SORBS1|10|fusion', 'PDLIM1-SORBS1|8|fusion', 'PDLIM1-SORBS1|6|fusion', 'ENSG00000107438|ENST00000329399|PDLIM1', 'ENST00000477757.5_1_10:97028616-97050708:-|nuORF'] 53372 11826 KQTALVELLK True PC9_epitope_Rep6 1141.7070594024499 1141.7054249037901 56.694 3 0.2521406704243816 0.00039635354736424893 0.00028804148510802916 ['CON__P02769'] 59730 7617 LGDLYEEEM[Oxidation]R True H1975_Epitope_Rep1 1269.55471811541 1269.55362993586 34.287 2 0.2521186337971244 0.00039635354736424893 0.00028818716341023215 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 35864 5966 GTMKAQGVLLK True NCI_RA007_Epitope_Rep4 1144.6638146914797 1144.6627099358602 29.567 2 0.2520920670049915 0.00039635354736424893 0.00028836288762975514 ['nc|ENSG00000166482|P55083-2|MFAP4'] 113890 5647 TNQELQEINR True H1975_Epitope_Rep3 1243.61567819875 1243.61458993586 26.751 2 0.2520821339903825 0.00039635354736424893 0.0002884286164562127 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 87683 19674 QQVQRLPFL True PC9_epitope_Rep3 1127.64512785223 1127.64402993586 80.91 2 0.2520614977097157 0.00039635354736424893 0.00028856521904098144 ['ENSG00000132963|ENST00000380842|POMP'] 16866 6059 EFFNGKEPSR True NCI_RA007_Epitope_Rep2 1209.5778361380496 1209.57619490379 28.173 3 0.2520508205128433 0.00039635354736424893 0.00028863592257790294 ['ENSG00000044574|ENST00000324460|HSPA5'] 17483 7124 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.5352099358602 32.212 2 0.252049463287167 0.00039635354736424893 0.0002886449112608805 ['ENSG00000162378|ENST00000294353|ZYG11B'] 21443 13439 ERISLQQEL True PC9_epitope_Rep4 1114.59823722946 1114.5971499358602 59.592 2 0.25204643480214045 0.00039635354736424893 0.00028866496943202175 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 49386 3545 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 18.441 3 0.25201652919629564 0.00039635354736424893 0.0002888631143833893 ['ENSG00000044574|ENST00000324460|HSPA5'] 68438 4991 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 24.283 2 0.25199778091931374 0.00039635354736424893 0.00028898740397873815 ['ENSG00000124570|ENST00000380539|SERPINB6'] 63801 8852 LNGTDPEDVIR True NCI_RA007_Epitope_Rep2 1227.60953018915 1227.6084299358602 39.08 2 0.2519897114711452 0.00039635354736424893 0.00028904091598006465 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 9915 17349 AYLPEWKENI True PC9_epitope_Rep6 1261.6342883850098 1261.6331899358602 79.347 2 0.25198927398086535 0.00039635354736424893 0.00028904381745120244 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 24075 12720 EYPDRIMNTF True NCI_RA007_Epitope_Rep1 1284.5808729131597 1284.5797699358602 53.463 2 0.25198058736976003 0.00039635354736424893 0.000289101433808663 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 49062 9933 KEIDAYIVQA True H1975_Epitope_Rep1 1148.607739284 1148.60664993586 43.143 2 0.251949894531496 0.00039635354736424893 0.00028930510479596965 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 54674 18598 KYLSVQGQLF True PC9_epitope_Rep2 1181.64445914589 1181.6433699358602 76.889 2 0.25194583487256106 0.00039635354736424893 0.0002893320545767788 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 17114 9621 EGLTSIEEVTK True H1975_Epitope_Rep3 1204.61869789052 1204.6176099358602 42.022 2 0.2519342063591984 0.00039635354736424893 0.00028940926363312897 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 73365 14996 MTELPAPLSY True H1975_Epitope_Rep1 1120.5474475265598 1120.54634993586 62.927 2 0.2519297432484276 0.00039635354736424893 0.000289438902533483 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 14193 7949 DSDYHDENM[Oxidation]YY True H1975_Epitope_Rep2 1466.4932400576602 1466.4921499358602 35.525 2 0.2519122885090613 0.00039635354736424893 0.0002895548462630513 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 54421 12676 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64810993586 57.105 2 0.25190890223649637 0.00039635354736424893 0.0002895773450914354 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 138498 13275 YHSEVPVSL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 58.959 2 0.25190700392577664 0.00039635354736424893 0.00028958995847743423 ['ENSG00000115306|ENST00000356805|SPTBN1'] 138055 14605 YGEPGEVFINK True PC9_epitope_Rep1 1251.6135529404298 1251.61244993586 61.002 2 0.251898054886433 0.00039635354736424893 0.0002896494280729065 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 21229 8727 ERDPQSPEF True PC9_epitope_Rep5 1103.4883524273098 1103.48724993586 38.51 2 0.25189653984521365 0.00039635354736424893 0.00028965949728017304 ['MSANTD4|p.E277Vfs*13|1|0.06|ENSG00000170903|chr11:106009731-106009743|CCAAGTTCATTTT/-|frameshift_variant', 'ENSG00000170903|ENST00000301919|MSANTD4'] 95906 19657 RYLDWIKKI True PC9_epitope_Rep3 1233.7233781729299 1233.7217249037901 80.846 3 0.2518767261822789 0.00039635354736424893 0.0002897912143734753 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 84180 10969 PYKVTQDEL True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 47.081 2 0.25184886668523626 0.00039635354736424893 0.0002899765200656599 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 54615 7600 KYLDNPNAL True NCI_RA007_Epitope_Rep3 1046.53965972418 1046.53856993586 37.028 2 0.2518412879141023 0.00039635354736424893 0.00029002695033418345 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 48044 23362 IYLPYLQNW True PC9_epitope_Rep5 1208.6229954253201 1208.62188993586 94.846 2 0.2518061027617716 0.00039635354736424893 0.0002902611927468864 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 99440 11984 SIAIDTIINQK True NCI_RA007_Epitope_Rep1 1214.6870522338602 1214.6859499358602 50.601 2 0.25180184716012655 0.00039635354736424893 0.00029028953693702126 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 88633 5249 QTEERVQPEY True H1975_Epitope_Rep3 1277.58879474457 1277.58768993586 25.275 2 0.25174672673593 0.00039635354736424893 0.00029065691416898344 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 105587 9269 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 40.608 2 0.2517396192126662 0.00039635354736424893 0.00029070431967276924 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 89463 20305 QYFDSRGMFI True PC9_epitope_Rep2 1262.5753936098997 1262.5742899358602 83.527 2 0.251739003290266 0.00039635354736424893 0.0002907084280948286 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 6743 4956 AQDEERQASL True PC9_epitope_Rep1 1145.53127986845 1145.53018993586 23.923 2 0.2517117435450369 0.00039635354736424893 0.00029089031862463604 ['ENSG00000184575|ENST00000332707|XPOT'] 98364 10811 SEYLRYEDTL True H1975_Epitope_Rep3 1287.59829679911 1287.5971899358601 46.663 2 0.25170827969146625 0.00039635354736424893 0.00029091343934031024 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 53961 6997 KTYGEIFEK True NCI_RA007_Epitope_Rep2 1113.57062549929 1113.5695299358601 31.838 2 0.2516876236532975 0.00039635354736424893 0.0002910513536263657 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 78675 11123 NYYEQWGK True PC9_epitope_Rep2 1086.47705946762 1086.4759699358601 48.109 2 0.2516873378020195 0.00039635354736424893 0.0002910532626309195 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 59736 10161 LGDLYEEEMR True NCI_RA007_Epitope_Rep2 1253.5598031154097 1253.5587099358602 44.112 2 0.2516766007904073 0.00039635354736424893 0.00029112497685565884 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 78158 12405 NYAQVLDKF True NCI_RA007_Epitope_Rep4 1096.5553097883198 1096.5542099358602 54.715 2 0.2516501086778097 0.00039635354736424893 0.0002913019977123081 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 101488 22629 SLLDIIEKV True PC9_epitope_Rep3 1028.61176203528 1028.6106699358602 92.311 2 0.25159576909200937 0.00039635354736424893 0.0002916654337067559 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 137743 5895 YENEVALRQ True NCI_RA007_Epitope_Rep5 1120.5512870370399 1120.55018993586 29.362 2 0.2515891105681559 0.00039635354736424893 0.00029170999873909156 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 102976 9879 SPFEVYVDK True H1975_Epitope_Rep1 1082.5284263341398 1082.52732993586 42.934 2 0.25158243197861446 0.00039635354736424893 0.0002917547049267737 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 29011 11570 FTEKEVQQWY True H1975_Epitope_Rep2 1356.6350166609998 1356.6339099358602 49.568 2 0.2515723871561156 0.00039635354736424893 0.00029182195746554733 ['ENSG00000107130|ENST00000372398|NCS1'] 12182 14515 DIFEAQIAGLR True H1975_Epitope_Rep3 1231.6560864587498 1231.6549899358602 61.194 2 0.25156283255507594 0.00039635354736424893 0.00029188594227367063 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 21941 10388 ESEDPDYYQY True H1975_Epitope_Rep1 1307.48299226335 1307.4818899358602 44.906 2 0.2515408031277507 0.00039635354736424893 0.00029203352151928915 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 95377 4127 RVYGGLTTK True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 22.16 2 0.25153406398589906 0.00039635354736424893 0.0002920786832284675 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 43016 7635 IETIEVM[Oxidation]EDR True NCI_RA007_Epitope_Rep2 1249.58601824369 1249.5849299358601 34.323 2 0.25153381959775156 0.00039635354736424893 0.0002920803211036153 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 49438 4520 KEYDALKAA True NCI_RA007_Epitope_Rep4 1007.5287606873097 1007.52766993586 23.781 2 0.2515028999469993 0.00039635354736424893 0.00029228761709589664 ['ENSG00000108829|ENST00000225972|LRRC59'] 41734 11179 IALTDNALIAR True NCI_RA007_Epitope_Rep5 1169.67682190333 1169.67572993586 49.635 2 0.25148408277903167 0.00039635354736424893 0.0002924138460592448 ['ENSG00000147604|ENST00000352983|RPL7'] 31242 11104 GDEELDSLIK True H1975_Epitope_Rep1 1117.5502839775297 1117.54918993586 47.676 2 0.2514633252311773 0.00039635354736424893 0.0002925531548355622 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 90422 16516 REIFLSQPILL True H1975_Epitope_Rep2 1327.7863723523099 1327.78526993586 68.749 2 0.25145487806271594 0.00039635354736424893 0.00029260986481093536 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 8582 9639 [Acetylation]-ATVQQLEGR True H1975_Epitope_Rep3 1042.54072266964 1042.5396299358601 42.093 2 0.25144558020736607 0.00039635354736424893 0.00029267229860465316 ['ENSG00000164687|ENST00000297258|FABP5'] 15972 7036 EDQTEYLEER True H1975_Epitope_Rep3 1310.5626395663799 1310.56154993586 32.029 2 0.2514435054649751 0.00039635354736424893 0.00029268623203097756 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 43018 14925 IETIEVMEDR True PC9_epitope_Rep5 1233.59110324369 1233.59000993586 62.413 2 0.25143853492592605 0.00039635354736424893 0.0002927196155739667 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 72932 15038 MPWGDPNYRSA True PC9_epitope_Rep5 1292.5608061749201 1292.5597099358602 62.848 2 0.25142663976670115 0.00039635354736424893 0.00029279952231922135 ['ENSG00000124226|ENST00000244061|RNF114'] 22312 13428 ETDLLDIRSEY True H1975_Epitope_Rep2 1352.64597526752 1352.64486993586 56.786 2 0.2514190054076689 0.00039635354736424893 0.0002928508182968474 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 77361 5445 NSELGSETRY True H1975_Epitope_Rep2 1154.52038083158 1154.5192899358601 25.971 2 0.2514102338593671 0.00039635354736424893 0.00029290976627827694 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF'] 2384 4549 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 22.606 2 0.25140602266176526 0.00039635354736424893 0.0002929380712775141 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 19960 4214 ELVSDANQHVK True NCI_RA007_Epitope_Rep2 1238.6255146064602 1238.62387490379 21.03 3 0.25139101143666565 0.00039635354736424893 0.00029303898952103257 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 121335 7673 VEVEGDNRYIA True H1975_Epitope_Rep3 1263.6095301891498 1263.6084299358602 34.498 2 0.25137207517105986 0.00039635354736424893 0.00029316634494675495 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 86559 6606 QLDSAQKNLY True H1975_Epitope_Rep3 1178.59315184902 1178.5920499358601 30.362 2 0.2513715843689504 0.00039635354736424893 0.0002931696465628378 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674', 'ENST00000521626.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-2|KRBOX4', 'ENSG00000147121|ENST00000344302|KRBOX4', 'ENST00000453909.3_1_X:46387515-46388371:-|nuORF', 'ENST00000522017.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-3|KRBOX4'] 103144 11710 SPIENIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 49.917 2 0.2512945305569233 0.00039635354736424893 0.0002936884486035898 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 107707 5558 SVSDEEM[Oxidation]M[Oxidation]ELR True H1975_Epitope_Rep3 1356.55373251968 1356.55262993586 26.424 2 0.25125249100508684 0.00039635354736424893 0.00029397188816257617 ['ENSG00000136167|ENST00000323076|LCP1', 'ENST00000460190.1_1_13:46733728-46733797:-|nuORF', 'LCP1|p.K220Sfs*29|1|0.26|ENSG00000136167|chr13:46152860-46152860|T/-|frameshift_variant'] 140958 8262 YSEYPPFSHRY True H1975_Epitope_Rep3 1444.6411646706 1444.64006993586 36.766 2 0.2512381731897283 0.00039635354736424893 0.00029406848449526984 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 137472 9940 YEEDAHITFA True H1975_Epitope_Rep2 1194.51931820242 1194.51822993586 43.223 2 0.25122952407454396 0.00039635354736424893 0.0002941268518865254 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 28863 7525 FTDEEGYGRY True H1975_Epitope_Rep3 1235.50948179471 1235.5083899358601 33.925 2 0.25122672607411306 0.00039635354736424893 0.0002941457363024867 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 118218 14735 TYKVISNEF True PC9_epitope_Rep5 1099.5549754351498 1099.5538699358601 61.677 2 0.2512196097858415 0.00039635354736424893 0.0002941937714177009 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 115797 9377 TSDHFETIMKY True H1975_Epitope_Rep3 1370.6176523446998 1370.61601490379 41.068 3 0.2512062369452674 0.00039635354736424893 0.00029428405968488124 ['ENSG00000136628|ENST00000366923|EPRS1'] 59012 11690 LEVNEAELLR True NCI_RA007_Epitope_Rep1 1184.6401020414398 1184.63900993586 49.447 2 0.2511996992813684 0.00039635354736424893 0.0002943282095818765 ['ENSG00000177469|ENST00000357037|CAVIN1'] 54378 10971 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.5338699358601 49.972 2 0.25117393733780247 0.00039635354736424893 0.0002945022487809167 ['ENSG00000123975|ENST00000314355|CKS2'] 70059 17422 LVNELTEFAK True PC9_epitope_Rep5 1162.6233893481399 1162.6222899358602 72.014 2 0.2511212145816581 0.00039635354736424893 0.0002948587480296407 ['CON__P02769'] 41971 5603 IDEM[Oxidation]PEAAVK True NCI_RA007_Epitope_Rep2 1117.5325261188498 1117.5314299358602 26.411 2 0.25111617407736136 0.00039635354736424893 0.00029489285341905775 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 12692 12806 DLDSRVLYY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 54.366 2 0.25109113000035554 0.00039635354736424893 0.0002950623669370632 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 88646 11394 QTELTNQLEY True H1975_Epitope_Rep2 1237.5826467349698 1237.58154993586 48.876 2 0.2510806815170756 0.00039635354736424893 0.0002951331174911167 ['ENSG00000160551|ENST00000261716|TAOK1', 'ENST00000578653.1_1_17:27849339-27857712:+|nuORF'] 62243 20773 LLFEGEKITI True PC9_epitope_Rep5 1161.6645258841297 1161.6634299358602 84.954 2 0.25107486685898905 0.00039635354736424893 0.000295172498062409 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 22245 12094 ESYSVYVYK True PC9_epitope_Rep4 1136.5389910178399 1136.5378899358602 54.324 2 0.2510664263263276 0.00039635354736424893 0.00029522967210384896 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 9845 14583 AYLESFYKF True NCI_RA007_Epitope_Rep4 1166.5648118428599 1166.56370993586 63.474 2 0.25106471106936856 0.00039635354736424893 0.0002952412921795347 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 106128 7874 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58082993586 35.233 2 0.2510386494148551 0.00039635354736424893 0.00029541790430107794 ['ENSG00000168090|ENST00000303904|COPS6'] 103075 6039 SPGLQKEAV True PC9_epitope_Rep5 927.5025459394699 927.50144993586 28.222 2 0.2510218299139233 0.00039635354736424893 0.0002955319413120932 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 41456 13716 HYKPTPLYF True PC9_epitope_Rep2 1164.59678067748 1164.59568993586 58.049 2 0.25099715656428995 0.00039635354736424893 0.00029569930764553645 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 48032 21572 IYLPYLHEW True PC9_epitope_Rep3 1232.62299542532 1232.62188993586 88.271 2 0.2509852082053195 0.00039635354736424893 0.00029578039090151666 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 70987 18950 LYHDIFSRL True PC9_epitope_Rep5 1162.61349337078 1162.6118549037901 77.915 3 0.25097744586167503 0.00039635354736424893 0.00029583307920829483 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 55242 10763 LADIQIEQLNR True H1975_Epitope_Rep1 1311.7146639640298 1311.71356993586 46.362 2 0.25097701201482403 0.00039635354736424893 0.0002958360242996271 ['ENST00000514611.1_1_5:139625581-139680122:-|nuORF', 'ENST00000507185.1_1_5:139661015-139682658:-|nuORF', 'ENSG00000113068|ENST00000261813|PFDN1'] 4505 10579 AKDIGFIKLD True NCI_RA007_Epitope_Rep4 1118.63356010902 1118.6324699358602 47.536 2 0.2509697233601262 0.00039635354736424893 0.000295885506416427 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000401543.2_1_9:90140306-90140387:+|nuORF', 'ENST00000496507.1_1_4:25680486-25680639:+|nuORF', 'ENST00000557367.2_1_14:50050387-50052826:-|nuORF'] 89230 10165 QVVESAYEVIK True NCI_RA007_Epitope_Rep1 1263.6710678165498 1263.66996993586 43.551 2 0.250938058941303 0.00039635354736424893 0.0002961005700625933 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 30231 19638 FYTVIPHNF True PC9_epitope_Rep2 1136.5654805492 1136.5643899358602 80.922 2 0.25092886866132513 0.00039635354736424893 0.00029616301946630883 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 9848 20405 AYLESFYKF True PC9_epitope_Rep2 1166.5648118428599 1166.56370993586 83.913 2 0.2509107376759287 0.00039635354736424893 0.0002962862610983803 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 115894 11774 TSETPDYLLKY True H1975_Epitope_Rep1 1328.6499980188 1328.64890993586 50.28 2 0.2508971239063341 0.00039635354736424893 0.00029637883168185444 ['ENSG00000105656|ENST00000262809|ELL'] 55246 12875 LADIYRELY True H1975_Epitope_Rep2 1154.5971746003 1154.5960699358602 54.635 2 0.2508942882756822 0.00039635354736424893 0.00029639811698343554 ['TAF6L|p.R593Pfs*8|1|0.26|ENSG00000162227|chr11:62787205-62787205|G/-|frameshift_variant', 'ENSG00000162227|ENST00000294168|TAF6L'] 53293 15722 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6750499358602 65.632 2 0.2508858549885281 0.00039635354736424893 0.0002964554797320209 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 26824 19915 FLASESLIKQI True PC9_epitope_Rep2 1247.71253870571 1247.7114499358602 81.998 2 0.25087960986006347 0.00039635354736424893 0.00029649796591970284 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 78183 15559 NYAWVYYHL True NCI_RA007_Epitope_Rep1 1227.57129420563 1227.57018993586 64.607 2 0.2508363005354122 0.00039635354736424893 0.00029679277126569377 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant', 'ENSG00000119917|ENST00000371818|IFIT3'] 118060 13873 TYGEIFEKF True NCI_RA007_Epitope_Rep2 1132.54407639828 1132.5429699358601 58.615 2 0.2507922181728763 0.00039635354736424893 0.00029709314043514486 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 28751 15488 FSSPHLVQV True PC9_epitope_Rep5 1012.5341804209198 1012.53308993586 64.584 2 0.25077492675316987 0.00039635354736424893 0.0002972110442100613 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 14391 11179 DTDEYVLKY True H1975_Epitope_Rep2 1144.52882025696 1144.5277299358602 48.038 2 0.2507699291317795 0.00039635354736424893 0.0002972451298732315 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1'] 28544 15560 FSEPDFVAKFY True H1975_Epitope_Rep3 1348.63395403184 1348.6328499358601 65.269 2 0.2507308161235252 0.00039635354736424893 0.0002975120307362038 ['ENSG00000179933|ENST00000319074|C14orf119'] 39705 6445 HLTDAYFK True NCI_RA007_Epitope_Rep5 993.49198125577 993.49088993586 31.458 2 0.25072952787929437 0.00039635354736424893 0.0002975208255929187 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 95955 8249 RYLENGKETL True PC9_epitope_Rep5 1221.6353510141698 1221.6337049037902 36.671 3 0.25071423104752627 0.00039635354736424893 0.00029762527714631483 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 113060 10713 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 1189.6376598937302 1189.63656993586 46.27 2 0.25070624649268913 0.00039635354736424893 0.0002976798127868024 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 21525 11251 ERMPEQIRL True PC9_epitope_Rep2 1170.61792712822 1170.61627490379 48.602 3 0.25067004847299046 0.00039635354736424893 0.0002979271760733838 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 2579 4730 AEQVQPPRSP True H1975_Epitope_Rep2 1107.5672714543498 1107.5661699358602 23.287 2 0.25066104100770525 0.00039635354736424893 0.00029798876162481287 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 24019 21186 EYMLEKSFYQF True PC9_epitope_Rep5 1483.6693535643901 1483.66824993586 86.539 2 0.2506467551098792 0.00039635354736424893 0.00029808646287876074 ['ENSG00000039123|ENST00000230640|MTREX'] 88677 13633 QTETGTPYMLY True H1975_Epitope_Rep3 1302.5802042068199 1302.57910993586 57.727 2 0.25061569490437835 0.00039635354736424893 0.0002982989944495649 ['ENSG00000167325|ENST00000300738|RRM1'] 118533 7817 TYQEVAQKF True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.54912993586 37.866 2 0.2506008415374559 0.00039635354736424893 0.00029840068331149836 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 90406 12430 REIEELLAEA True H1975_Epitope_Rep1 1171.6084675599898 1171.60736993586 52.848 2 0.2505957746572591 0.00039635354736424893 0.0002984353800474664 ['nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10', 'ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF'] 43697 9845 IHDPQLLTER True PC9_epitope_Rep5 1220.65133543148 1220.6496749037901 42.839 3 0.25059491340422363 0.00039635354736424893 0.00029844127809630454 ['ENSG00000115866|ENST00000264161|DARS1', 'nc|ENSG00000115866|P14868-2|DARS1', 'ENST00000478212.5_1_2:136664888-136669084:-|nuORF', 'ENST00000491481.1_1_2:136668634-136670100:-|nuORF', 'ENST00000489964.5_1_2:136664888-136672125:-|nuORF'] 106454 18755 STIRLLTSL True PC9_epitope_Rep4 1002.60734536118 1002.60624993586 80.223 2 0.25058761879809227 0.00039635354736424893 0.0002984912378384949 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 16087 12440 EEAENTLQSFR True PC9_epitope_Rep5 1322.61025846514 1322.60916993586 52.852 2 0.25058442044743107 0.00039635354736424893 0.0002985131455410046 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 17797 16194 EHSLVIDTL True PC9_epitope_Rep4 1025.53932537101 1025.53822993586 70.232 2 0.25052873612434734 0.00039635354736424893 0.0002988948241990703 ['ENSG00000143256|ENST00000368010|PFDN2'] 40973 9185 HTDMADIEQY True H1975_Epitope_Rep3 1221.49720285885 1221.4961099358602 40.32 2 0.2505187546491201 0.00039635354736424893 0.00029896329220297174 ['ENSG00000185818|ENST00000423729|NAT8L'] 43732 9411 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 46.417 2 0.25051293482813897 0.00039635354736424893 0.0002990032205649009 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 35628 12891 GTDELRLLY True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 54.81 2 0.2505038050592093 0.00039635354736424893 0.0002990658684384234 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 74543 6499 NFSDNQLQEGK True NCI_RA007_Epitope_Rep1 1278.5840437173 1278.5829499358601 29.298 2 0.25049737859205934 0.00039635354736424893 0.00029910997432441324 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 42039 10139 IDIIPNPQER True H1975_Epitope_Rep3 1193.64043639461 1193.6393299358601 44.043 2 0.2504957895961366 0.00039635354736424893 0.0002991208808665627 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 70808 14547 LYAPYSTHF True PC9_epitope_Rep6 1097.51819600361 1097.5170899358602 67.849 2 0.25046897897521664 0.00039635354736424893 0.00029930496359720606 ['ENSG00000013588|ENST00000014914|GPRC5A'] 134022 8755 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 41.184 3 0.2504668449395281 0.00039635354736424893 0.0002993196208453227 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 30195 21043 FYQRFPLSF True PC9_epitope_Rep5 1203.6076797143498 1203.60658993586 86.001 2 0.25046047611290884 0.00039635354736424893 0.0002993633682873122 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 95996 21585 RYLMDPDTFTF True PC9_epitope_Rep3 1404.6383877892797 1404.63728993586 88.322 2 0.2504585000072324 0.00039635354736424893 0.000299376943451477 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 23638 22156 EWSPYTKIFQF True PC9_epitope_Rep1 1444.7027022979998 1444.70160993586 90.038 2 0.25045551996741033 0.00039635354736424893 0.0002993974164639268 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 47730 17456 IYDPNLAFLRF True NCI_RA007_Epitope_Rep4 1367.7237720957498 1367.72266993586 75.579 2 0.2504443645301631 0.00039635354736424893 0.00029947406729982336 ['ENSG00000197943|ENST00000564138|PLCG2'] 54366 12829 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.53333490379 54.221 3 0.25043422380958 0.00039635354736424893 0.00029954376292191823 ['ENSG00000123975|ENST00000314355|CKS2'] 103377 5234 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 24.442 2 0.2504023576796031 0.00039635354736424893 0.0002997628798144036 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 70048 11745 LVNELTEFAK True NCI_RA007_Epitope_Rep2 1162.6233893481399 1162.6222899358602 50.282 2 0.2503641354140288 0.00039635354736424893 0.000300025914544625 ['CON__P02769'] 11839 5977 DHHENKYLL True PC9_epitope_Rep2 1167.56727145435 1167.56563490379 28.377 3 0.2503569359868638 0.00039635354736424893 0.00030007548483967976 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 139165 8437 YLDYHMEKY True H1975_Epitope_Rep2 1260.5485101557201 1260.54685490379 37.403 3 0.2503471001506734 0.00039635354736424893 0.0003001432209025138 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 142631 19681 YYNPHLLLNTL True PC9_epitope_Rep4 1359.7186867153098 1359.7175899358601 83.823 2 0.250334476643099 0.00039635354736424893 0.0003002301771729912 ['ENSG00000205339|ENST00000379719|IPO7'] 133766 16578 VYENVSHFL True PC9_epitope_Rep4 1106.53965972418 1106.53856993586 71.743 2 0.25033145854440747 0.00039635354736424893 0.0003002509709045896 ['ENSG00000164933|ENST00000297578|SLC25A32'] 95657 13755 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.5869099358601 57.754 2 0.2503289775188886 0.00039635354736424893 0.000300268065455631 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 57335 7931 LEAEIATYR True H1975_Epitope_Rep3 1064.55022440788 1064.54912993586 35.476 2 0.2503265325780473 0.00039635354736424893 0.00030028491233364385 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 44058 19576 IILEEGKEILV True PC9_epitope_Rep2 1254.7435044808199 1254.74240993586 80.68 2 0.25032184510906846 0.00039635354736424893 0.00030031721401384287 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 28951 9324 FTDQQKLIY True H1975_Epitope_Rep3 1154.5971746002997 1154.5960699358602 40.862 2 0.2503120257143771 0.00039635354736424893 0.0003003848914494062 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 136278 10579 WSDYSDNLKY True H1975_Epitope_Rep2 1289.55643198713 1289.55532993586 45.714 2 0.2502996506229826 0.00039635354736424893 0.00030047020508838323 ['nc|ENSG00000196150|P15622-2|ZNF250', 'ENSG00000196150|ENST00000417550|ZNF250', 'nc|ENSG00000196150|P15622|ZNF250'] 68306 13615 LTEITKGWLY True H1975_Epitope_Rep3 1222.65977485686 1222.6586699358602 57.658 2 0.25028367236916466 0.00039635354736424893 0.00030058039479067855 ['nc|ENSG00000139263|Q6UXM1-2|LRIG3', 'ENSG00000139263|ENST00000320743|LRIG3'] 140856 7453 YSDSLVQKGY True H1975_Epitope_Rep1 1158.5557037111398 1158.55460993586 33.667 2 0.25027491365342736 0.00039635354736424893 0.0003006408140920763 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 2736 9548 AETEEGPDVLR True PC9_epitope_Rep5 1214.5778957076998 1214.57678993586 41.684 2 0.2502631206138239 0.00039635354736424893 0.00030072218397543543 ['nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 137553 12272 YEELQSLAGK True PC9_epitope_Rep1 1136.5713537752797 1136.5702499358601 52.06 2 0.2502567843996484 0.00039635354736424893 0.0003007659118481946 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 90581 9008 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 39.601 2 0.25024814120542316 0.00039635354736424893 0.00030082557107294935 ['ENSG00000026025|ENST00000544301|VIM'] 90578 8705 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 38.445 2 0.250245526264643 0.00039635354736424893 0.0003008436229111262 ['ENSG00000026025|ENST00000544301|VIM'] 24018 20186 EYMLEKSFYQF True PC9_epitope_Rep4 1483.6693535643901 1483.66824993586 85.783 2 0.2502319263058064 0.00039635354736424893 0.0003009375256311755 ['ENSG00000039123|ENST00000230640|MTREX'] 3821 12508 AGVLAHLEEER True PC9_epitope_Rep1 1222.6305999868998 1222.6289549037901 52.98 3 0.25020399823379214 0.00039635354736424893 0.0003011304508483729 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 34107 8426 GM[Oxidation]DVELTVEER True NCI_RA007_Epitope_Rep1 1292.59183190012 1292.59072993586 36.777 2 0.2501585528791527 0.00039635354736424893 0.0003014446493412228 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 2578 4627 AEQVQPPRSP True H1975_Epitope_Rep2 1107.5672714543498 1107.5661699358602 22.898 2 0.25015583387035234 0.00039635354736424893 0.00030146345834552844 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 41481 12343 HYLPDLHHL True PC9_epitope_Rep2 1143.5825275956702 1143.5808749037901 52.788 3 0.25015085312266955 0.00039635354736424893 0.000301497916197395 ['ENSG00000130702|ENST00000252999|LAMA5'] 119824 6483 VDATAETDLAK True NCI_RA007_Epitope_Rep1 1132.5611830144 1132.56008993586 29.237 2 0.25014788059844406 0.00039635354736424893 0.00030151848262174364 ['ENSG00000155660|ENST00000652332|PDIA4'] 68015 11723 LTDIFQHDTY True H1975_Epitope_Rep1 1251.57716743171 1251.57606993586 50.084 2 0.25014151394362494 0.00039635354736424893 0.00030156253723059466 ['ENSG00000164366|ENST00000296824|CCDC127'] 138610 8174 YIDQGRNPQLY True H1975_Epitope_Rep1 1365.66771377161 1365.6666099358602 36.381 2 0.2501168556277962 0.00039635354736424893 0.0003017332234470363 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 48236 13253 IYQKAFDLI True NCI_RA007_Epitope_Rep5 1109.6120963884498 1109.61098993586 57.657 2 0.25011429351340253 0.00039635354736424893 0.0003017509640973415 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 23494 4821 EVVEEAENGR True PC9_epitope_Rep1 1130.5203808315798 1130.5192899358601 23.414 2 0.25006710391417725 0.00039635354736424893 0.0003020779024520407 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 90081 5071 REAEHLYHTL True H1975_Epitope_Rep3 1267.6309343400699 1267.62928490379 24.623 3 0.249989464259995 0.00039635354736424893 0.00030261657745357255 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 72924 15115 MPWGDPNYRSA True PC9_epitope_Rep1 1292.5608061749201 1292.5597099358602 62.958 2 0.24998541875012928 0.00039635354736424893 0.0003026446721609071 ['ENSG00000124226|ENST00000244061|RNF114'] 62148 14601 LLEKEILFY True H1975_Epitope_Rep1 1166.6587122276999 1166.6576099358601 61.371 2 0.24997547435496956 0.00039635354736424893 0.00030271374376020845 ['ENSG00000153147|ENST00000283131|SMARCA5'] 36081 20881 GVAESIHLWEV True PC9_epitope_Rep5 1238.62953735774 1238.62844993586 85.371 2 0.24996814733733566 0.00039635354736424893 0.000302764645738119 ['ENSG00000065268|ENST00000585809|WDR18'] 71001 19757 LYIGWDKHYGF True PC9_epitope_Rep2 1397.67682190333 1397.67572993586 81.383 2 0.2499493802890903 0.00039635354736424893 0.0003028950626024232 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 108436 19835 SYLPISPTF True PC9_epitope_Rep6 1023.52769805815 1023.5266099358599 88.957 2 0.24993692658789166 0.00039635354736424893 0.0003029816375414155 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 121332 7546 VEVEGDNRYIA True H1975_Epitope_Rep1 1263.6095301891498 1263.6084299358602 34.02 2 0.2498745177934303 0.00039635354736424893 0.00030341586129527443 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 31362 6512 [Acetylation]-GDREQLLQR True NCI_RA007_Epitope_Rep5 1155.5996345280898 1155.5985299358601 31.714 2 0.24984325876067437 0.00039635354736424893 0.0003036335877675102 ['ENSG00000128245|ENST00000248975|YWHAH'] 128844 20545 VQDELHSVLGL True PC9_epitope_Rep5 1208.64010204144 1208.63900993586 84.07 2 0.2497985371558301 0.00039635354736424893 0.00030394535658420625 ['ENSG00000204560|ENST00000376442|DHX16'] 95084 4844 RTYVGSMPGR True NCI_RA007_Epitope_Rep4 1122.5604122520997 1122.55876490379 25.071 3 0.24977974755179214 0.00039635354736424893 0.0003040764407389022 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant', 'LONP2|p.D481Lfs*6|1|0.35|ENSG00000102910|chr16:48296067-48296073|CCTTTGA/-|frameshift_variant'] 24953 17126 FDAGELITQR True PC9_epitope_Rep3 1148.5825871653199 1148.5814899358602 71.03 2 0.24976779044419092 0.00039635354736424893 0.0003041598880430115 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 14803 10104 DVQM[Oxidation]LQDAISK True NCI_RA007_Epitope_Rep1 1262.6176527251398 1262.6165499358601 43.313 2 0.24975230244978283 0.00039635354736424893 0.0003042680111380136 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 141258 4982 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 24.246 2 0.24974176719904292 0.00039635354736424893 0.00030434158069975875 ['ENSG00000125398|ENST00000245479|SOX9'] 70311 7724 LVSESSDVLPK True H1975_Epitope_Rep3 1172.6288686514001 1172.6277699358602 34.693 2 0.24972078717394752 0.00039635354736424893 0.0003044881411346423 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 54041 10150 KVIDPATATSV True PC9_epitope_Rep2 1100.607739284 1100.60664993586 44.379 2 0.24970934749981943 0.00039635354736424893 0.0003045680852233716 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 78094 7017 NVYEVVNPK True NCI_RA007_Epitope_Rep4 1060.5553097883198 1060.5542099358602 33.619 2 0.24967400865644218 0.00039635354736424893 0.0003048151772575672 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant', 'CPNE8|p.K277Efs*5|1|0.39|ENSG00000139117|chr12:38724870-38724871|-/T|frameshift_variant'] 31243 11071 GDEELDSLIK True H1975_Epitope_Rep3 1117.5502839775297 1117.54918993586 47.677 2 0.24964531375550128 0.00039635354736424893 0.0003050159621558336 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 141788 9927 YVDDASWM[Oxidation]RY True H1975_Epitope_Rep1 1320.54448778488 1320.5433899358602 43.121 2 0.2496338540448191 0.00039635354736424893 0.00030509618546461175 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 27907 6972 FQEALDAAGDK True NCI_RA007_Epitope_Rep2 1163.5458673034298 1163.5447699358601 31.741 2 0.24962458476953353 0.00039635354736424893 0.00030516109018107677 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN'] 8121 13730 ATEEAPYWTY True H1975_Epitope_Rep3 1229.5240692296898 1229.5229699358601 58.109 2 0.24961346914551755 0.00039635354736424893 0.00030523894153444497 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 84768 4807 QDVDNASLAR True NCI_RA007_Epitope_Rep2 1087.52580056519 1087.52470993586 23.325 2 0.24958251173134588 0.00039635354736424893 0.00030545586533142614 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 133937 10850 VYIKHPVSL True PC9_epitope_Rep1 1054.61751612206 1054.61640993586 46.621 2 0.24956352580004793 0.00039635354736424893 0.0003055889793924753 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 65110 21603 LQMEPAAFQAL True PC9_epitope_Rep5 1217.61144476545 1217.61034993586 88.136 2 0.24955877487566985 0.00039635354736424893 0.0003056222981448298 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 42823 4706 IEQAYDNPHEA True H1975_Epitope_Rep3 1285.55749461629 1285.5563899358601 23.227 2 0.24954139740917464 0.00039635354736424893 0.00030574419924572863 ['ENSG00000174231|ENST00000304992|PRPF8'] 4739 9466 ALDGRETDFY True H1975_Epitope_Rep1 1185.5302172392899 1185.52912993586 41.328 2 0.24953227640802145 0.00039635354736424893 0.0003058082016165449 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 36240 6958 GVDGYETEGIR True H1975_Epitope_Rep1 1194.5516809598598 1194.5505899358602 31.804 2 0.24950099027998351 0.00039635354736424893 0.00030602783950034034 ['ENSG00000076003|ENST00000264156|MCM6'] 13891 7779 DQVANSAFVER True NCI_RA007_Epitope_Rep1 1234.59421447818 1234.5931099358602 34.249 2 0.249497389593248 0.00039635354736424893 0.0003060531275336884 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 14349 5146 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 24.879 2 0.24949049201465603 0.00039635354736424893 0.00030610157586504296 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 61949 14512 LLDLDEELRY True H1975_Epitope_Rep3 1277.6503323719699 1277.6492299358601 61.182 2 0.249484487976264 0.00039635354736424893 0.00030614375426327953 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'nc|ENSG00000119650|Q96FT9-3|IFT43', 'ENST00000554026.5_1_14:76452129-76542971:+|nuORF', 'nc|ENSG00000119650|Q96FT9-4|IFT43'] 21440 14116 ERISLQQEL True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 59.569 2 0.24948085892855296 0.00039635354736424893 0.0003061692511659895 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 54022 13236 KVIDDTNITRL True PC9_epitope_Rep1 1286.7194149913 1286.7183099358601 55.778 2 0.24947610644956278 0.00039635354736424893 0.0003062026442729575 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 134227 19979 VYM[Oxidation]DWYEKF True PC9_epitope_Rep3 1295.55326156343 1295.55216993586 82.094 2 0.24945677936366903 0.00039635354736424893 0.0003063384829066085 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 137146 15530 YAVEGRDLTL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 67.66 2 0.24942725111889832 0.00039635354736424893 0.0003065461361152479 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 53870 6428 KTIVFVETK True NCI_RA007_Epitope_Rep4 1063.62774645259 1063.62664993586 31.326 2 0.24941646534254183 0.00039635354736424893 0.000306622020746317 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 41970 5484 IDEM[Oxidation]PEAAVK True NCI_RA007_Epitope_Rep1 1117.5325261188498 1117.5314299358602 25.402 2 0.24940186966743855 0.00039635354736424893 0.00030672474036791305 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 1021 10597 AEAEAWYQTK True PC9_epitope_Rep5 1195.5509526838698 1195.54984993586 45.749 2 0.2493957003877986 0.00039635354736424893 0.0003067681681270356 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 85745 15237 QHDFQAPYL True PC9_epitope_Rep4 1117.5192586327698 1117.5181699358602 66.539 2 0.24939402382068077 0.00039635354736424893 0.0003067799711460268 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 93540 10783 RQLETLGQEKL True PC9_epitope_Rep5 1313.7303140281695 1313.72866490379 46.468 3 0.24938798520470168 0.00039635354736424893 0.00030682248672711857 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 88552 8354 QTDDTWRTEY True H1975_Epitope_Rep3 1313.55240923585 1313.5513099358602 37.118 2 0.24938515410132822 0.00039635354736424893 0.0003068424214750183 ['ENSG00000121741|ENST00000610343|ZMYM2'] 32257 17641 GFAFVQYVNER True PC9_epitope_Rep6 1328.65133543148 1328.6502299358601 80.495 2 0.24937822640844684 0.00039635354736424893 0.0003068912071594858 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant'] 130661 10383 VSTEVDARL True PC9_epitope_Rep5 988.5189242795998 988.51782993586 44.922 2 0.2493682529662047 0.00039635354736424893 0.00030696145505084506 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 137558 7122 YEELQVTAGR True H1975_Epitope_Rep1 1164.5775017848798 1164.57640993586 32.419 2 0.24936462921639654 0.00039635354736424893 0.00030698698290748677 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 78211 16405 NYFLWTEKF True NCI_RA007_Epitope_Rep5 1246.60225998074 1246.60116993586 69.857 2 0.24936310759248162 0.00039635354736424893 0.0003069977027690941 ['ENSG00000100351|ENST00000344138|GRAP2'] 138054 14511 YGEPGEVFINK True PC9_epitope_Rep1 1251.6135529404298 1251.61244993586 60.641 2 0.24936039588864578 0.00039635354736424893 0.0003070168076906471 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 43716 10309 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 44.983 2 0.2493547193996952 0.00039635354736424893 0.0003070568044410858 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 71880 11340 M[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1214.5641606002998 1214.56306993586 48.596 2 0.24935372631124872 0.00039635354736424893 0.00030706380231578683 ['CON__P02769'] 86565 11180 QLDTRVSEFY True H1975_Epitope_Rep2 1256.60371653272 1256.60260993586 48.042 2 0.24934589736932813 0.00039635354736424893 0.0003071189751608901 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 134821 16647 VYTYIQSRF True PC9_epitope_Rep3 1175.5975089534697 1175.59640993586 69.169 2 0.24934248373791143 0.00039635354736424893 0.0003071430351321088 ['DYRK2|p.A390*|1|0.05|ENSG00000127334|chr12:67658074-67658075|-/TA|frameshift_variant', 'DYRK2|p.P391Efs*19|1|0.04|ENSG00000127334|chr12:67658076-67658077|-/CGAGGTTTGTAGAGGT|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 8022 7766 ATDLTREVY True H1975_Epitope_Rep2 1066.5294889632999 1066.52838993586 34.819 2 0.2493228384306885 0.00039635354736424893 0.0003072815360045402 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 75914 9813 NLQYYDISAK True NCI_RA007_Epitope_Rep1 1213.5979028762902 1213.5968099358602 42.174 2 0.24931538501171135 0.00039635354736424893 0.0003073340995441634 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 127169 7483 VLVDQTTGLSR True H1975_Epitope_Rep1 1187.65100107831 1187.64990993586 33.781 2 0.24929911386602358 0.00039635354736424893 0.00030744887941546844 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 24266 18269 EYTDVLQKI True PC9_epitope_Rep2 1107.58119018299 1107.58008993586 75.593 2 0.24927858886274396 0.00039635354736424893 0.00030759372813924545 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 8795 10199 AVDPTSGQLY True H1975_Epitope_Rep1 1049.50293986229 1049.5023749679299 44.171 1 0.24927500352368198 0.00039635354736424893 0.00030761903755524653 ['ENSG00000132182|ENST00000254508|NUP210', 'NUP210|p.K1258R|1|0.07|ENSG00000132182|chr3:13335524-13335524|T/C|missense_variant'] 2536 6761 AEQPTRYETL True H1975_Epitope_Rep2 1206.5880664685799 1206.58696993586 30.921 2 0.24925658266960035 0.00039635354736424893 0.0003077491058965727 ['SLC25A24|p.I172Mfs*3|1|0.53|ENSG00000085491|chr1:108157615-108157615|A/-|frameshift_variant', 'ENSG00000085491|ENST00000565488|SLC25A24'] 113935 5681 TNYNDRYDEIR True NCI_RA007_Epitope_Rep5 1457.6535202594498 1457.65186490379 28.541 3 0.24925585098577846 0.00039635354736424893 0.0003077542734024232 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000541658.2_1_14:35704472-35704841:-|nuORF'] 139020 9288 YLAEFATGNDR True NCI_RA007_Epitope_Rep2 1255.5833154413099 1255.5822099358602 40.738 2 0.24924014731858396 0.00039635354736424893 0.00030786520128478907 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000453697.1_1_7:63894611-63894797:+|nuORF'] 142825 10045 YYSPTKNEI True PC9_epitope_Rep1 1113.53423999057 1113.5331499358601 43.506 2 0.24920725437236893 0.00039635354736424893 0.00030809768108126177 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 74907 15615 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69592490379 65.34 3 0.24919673858514496 0.00039635354736424893 0.00030817204137523836 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 41396 19534 HYFDPQYFEF True PC9_epitope_Rep6 1391.58225281215 1391.5811499358601 87.802 2 0.2491966242951954 0.00039635354736424893 0.00030817284965267824 ['ENSG00000084623|ENST00000677711|EIF3I'] 971 5289 ADTQTYQPYNK True NCI_RA007_Epitope_Rep1 1327.6044448087098 1327.60334993586 24.655 2 0.24915182190595986 0.00039635354736424893 0.0003084898633449339 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF'] 10112 8074 AYVEKVERL True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 36.416 2 0.24914838363710515 0.00039635354736424893 0.0003085142054244806 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 142303 13648 YYDKHFTEF True PC9_epitope_Rep5 1248.54513902744 1248.5440499358601 57.521 2 0.24914350897688659 0.00039635354736424893 0.0003085487200945371 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 137042 9423 YALYDATYETK True H1975_Epitope_Rep1 1336.61869789052 1336.6176099358602 41.158 2 0.24912619245290224 0.00039635354736424893 0.0003086713597633652 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 137169 9345 YAYDGKDYL True NCI_RA007_Epitope_Rep4 1106.4920408254197 1106.49094993586 42.8 2 0.24909646101787594 0.00039635354736424893 0.00030888203873372035 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 47686 17066 IYADNQVMHF True PC9_epitope_Rep2 1236.55974354576 1236.55864993586 70.895 2 0.24908051536546919 0.00039635354736424893 0.0003089950900995404 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 141814 15365 YVDDIFLRV True H1975_Epitope_Rep2 1138.60225998074 1138.60116993586 64.26 2 0.24907244253475885 0.00039635354736424893 0.00030905234061025255 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 20081 6967 EM[Oxidation]FEDTVEER True H1975_Epitope_Rep3 1299.5288972903898 1299.52778993586 31.761 2 0.24906709247017655 0.00039635354736424893 0.00030909028779900916 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7'] 85894 15547 QHFEFEYQT True PC9_epitope_Rep5 1227.5196525555898 1227.5185499358602 64.812 2 0.24906287080472894 0.00039635354736424893 0.00030912023472292395 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 141212 9305 YTADGKEVLEY True H1975_Epitope_Rep3 1286.6030478263801 1286.6019499358601 40.786 2 0.24904276640908088 0.00039635354736424893 0.00030926288774264186 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 66185 8797 LSERADWQY True H1975_Epitope_Rep3 1166.5356369729 1166.53452993586 38.844 2 0.2490340504075821 0.00039635354736424893 0.00030932475362805025 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 2220 5078 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep2 1120.4971436696399 1120.4960499358601 24.614 2 0.24901204590577053 0.00039635354736424893 0.00030948099605176255 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 89560 19950 QYMERLQLL True PC9_epitope_Rep1 1192.62742918276 1192.6263299358602 81.56 2 0.24900182051847514 0.00039635354736424893 0.0003095536280875976 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 27819 16718 FQDENHLYL True PC9_epitope_Rep1 1177.54038800017 1177.53928993586 69.134 2 0.24896076395343378 0.00039635354736424893 0.0003098454294363084 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 21810 9411 ERYKEVAEL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 41.154 2 0.2489562460007041 0.00039635354736424893 0.00030987755672320423 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 53298 15405 KQLDDLKVEL True PC9_epitope_Rep5 1199.6761531969898 1199.6745149037902 64.264 3 0.24891557354658703 0.00039635354736424893 0.0003101669300822514 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 54928 16996 KYPSPFFVF True NCI_RA007_Epitope_Rep5 1130.5800679841798 1130.5789699358602 72.135 2 0.2489113314884043 0.00039635354736424893 0.0003101971267609541 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 28542 15577 FSEPDFVAKFY True H1975_Epitope_Rep1 1348.63395403184 1348.6328499358601 65.198 2 0.2488754927477424 0.00039635354736424893 0.0003104523590203673 ['ENSG00000179933|ENST00000319074|C14orf119'] 67941 11179 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 47.968 2 0.24887539855857366 0.00039635354736424893 0.0003104530300833886 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 92852 11852 RPFEDQTSL True PC9_epitope_Rep1 1091.52473793603 1091.52364993586 50.454 2 0.2488651759242461 0.00039635354736424893 0.00031052587122044363 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 142617 12697 YYMKDLPTSF True NCI_RA007_Epitope_Rep3 1263.58456131127 1263.5834699358602 57.185 2 0.2488164438537755 0.00039635354736424893 0.00031087334603508023 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 48925 12892 KEEDVLKFLAA True H1975_Epitope_Rep3 1261.69180326113 1261.69015490379 54.814 3 0.24872701617272613 0.00039635354736424893 0.0003115120076047278 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 131421 16405 VTIEDVQKL True PC9_epitope_Rep3 1043.58627556343 1043.5851699358602 68.239 2 0.24872477003920382 0.00039635354736424893 0.00031152806563762103 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 24284 11452 EYTPRSWNF True NCI_RA007_Epitope_Rep3 1198.54072235334 1198.5396299358601 52.167 2 0.24871229944824333 0.00039635354736424893 0.0003116172353446823 ['ENSG00000156671|ENST00000542569|SAMD8'] 56618 9884 LDIDSPPITAR True H1975_Epitope_Rep1 1196.6401020414398 1196.63900993586 42.952 2 0.24870690903098658 0.00039635354736424893 0.0003116557869022008 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 28749 14060 FSSPHLVQV True PC9_epitope_Rep4 1012.5341804209198 1012.53308993586 61.991 2 0.24870545747639472 0.00039635354736424893 0.0003116661690475211 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 24531 14312 FAFVTFDDHD True NCI_RA007_Epitope_Rep4 1212.50875351872 1212.5076499358602 62.355 2 0.24868750347368557 0.00039635354736424893 0.00031179461250179814 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 800 6982 AAYEAELGDAR True NCI_RA007_Epitope_Rep5 1164.54111627616 1164.54000993586 33.538 2 0.24866465240902774 0.00039635354736424893 0.00031195816644141776 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 89978 3718 RDHALLEEQSK True NCI_RA007_Epitope_Rep2 1324.6735274280397 1324.67188490379 19.108 3 0.2486543924600339 0.00039635354736424893 0.00031203162885694145 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 116233 15581 TTDDWKDFLY True H1975_Epitope_Rep3 1302.57683307854 1302.5757299358602 65.349 2 0.2486289436549647 0.00039635354736424893 0.0003122139201051479 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 122065 22090 VFYPYPQYF True PC9_epitope_Rep2 1222.5698972232997 1222.5688099358601 90.442 2 0.2486230999583931 0.00039635354736424893 0.00031225579391009635 ['ENSG00000103160|ENST00000219439|HSDL1'] 13779 20943 DQIAKYWEL True PC9_epitope_Rep1 1164.5815245361598 1164.5804299358601 85.378 2 0.24861353520485882 0.00039635354736424893 0.00031232434360710935 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 41967 4900 IDEM[Oxidation]PEAAVK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 23.975 2 0.2485895604212607 0.00039635354736424893 0.0003124962349619209 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 48344 16797 IYSPQFSRL True PC9_epitope_Rep5 1109.5869442697701 1109.58584993586 69.618 2 0.24858855291054283 0.00039635354736424893 0.0003125034605605038 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171225816-171400468:+|nuORF'] 45687 17091 IRKPYIWEY True PC9_epitope_Rep5 1266.67609362734 1266.6749899358601 70.762 2 0.24858524050556816 0.00039635354736424893 0.0003125272174276176 ['ENSG00000136628|ENST00000366923|EPRS1'] 102744 21331 SMVEDITGLRL True PC9_epitope_Rep3 1232.6434731697198 1232.6423699358602 87.346 2 0.2485677966542014 0.00039635354736424893 0.00031265235618212445 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 95118 4816 RVEIM[Oxidation]EEESEQ True H1975_Epitope_Rep3 1393.60312485981 1393.6020299358602 23.651 2 0.24855729465458296 0.00039635354736424893 0.00031272771968517767 ['nc|ENSG00000101557|P54578-2|USP14', 'nc|ENSG00000101557|P54578-3|USP14', 'ENSG00000101557|ENST00000261601|USP14', 'ENST00000578942.5_1_18:210315-211281:+|nuORF'] 95660 12152 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.58635490379 52.052 3 0.2485363655690803 0.00039635354736424893 0.0003128779634226784 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 70060 15212 LVNELTEFAK True PC9_epitope_Rep6 1162.6233893481399 1162.6222899358602 70.609 2 0.24847928488438512 0.00039635354736424893 0.0003132880967880068 ['CON__P02769'] 78549 17260 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.5344899358602 71.209 2 0.24847883011425137 0.00039635354736424893 0.00031329136654372093 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 137750 8212 YENEVALRQ True PC9_epitope_Rep5 1120.5512870370399 1120.55018993586 36.527 2 0.2484702250526266 0.00039635354736424893 0.00031335324259989145 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 60941 9184 LIDENDNKI True PC9_epitope_Rep1 1072.540053647 1072.53894993586 40.176 2 0.24846659662127818 0.00039635354736424893 0.0003133793370815692 ['ENST00000482091.1_1_10:1089912-1094811:-|nuORF', 'nc|ENSG00000067064|Q13907|IDI1', 'ENSG00000067064|ENST00000381344|IDI1'] 26881 12230 FLDGIYVSEK True NCI_RA007_Epitope_Rep1 1169.59684024713 1169.59574993586 51.541 2 0.24846329770596107 0.00039635354736424893 0.00031340306368351226 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 26827 20191 FLASESLIKQI True PC9_epitope_Rep5 1247.71253870571 1247.7114499358602 82.711 2 0.24845973933838783 0.00039635354736424893 0.0003134286583483772 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 142497 15272 YYIFIPSKF True NCI_RA007_Epitope_Rep3 1176.6219327961599 1176.62082993586 67.621 2 0.2484458032932686 0.00039635354736424893 0.0003135289178625736 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 118277 18177 TYLPAPEGLKF True PC9_epitope_Rep6 1234.65977485686 1234.6586699358602 82.559 2 0.24844282464637324 0.00039635354736424893 0.0003135503511894652 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 18676 6066 ELAEQELEK True H1975_Epitope_Rep3 1087.5397192938299 1087.5386299358602 28.343 2 0.24843617199112347 0.00039635354736424893 0.0003135982267317887 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 137783 8920 YEQELKDLAA True H1975_Epitope_Rep2 1178.5819184589798 1178.58082993586 39.272 2 0.24843546599843122 0.00039635354736424893 0.00031360330780744167 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 140814 4278 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 21.569 2 0.24840408702313727 0.00039635354736424893 0.00031382922773274424 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 47724 18018 IYDPNLAFLRF True NCI_RA007_Epitope_Rep1 1367.7237720957498 1367.72266993586 74.224 2 0.2483827815806759 0.00039635354736424893 0.00031398271401654037 ['ENSG00000197943|ENST00000564138|PLCG2'] 132130 10920 VTVEKVIKI True PC9_epitope_Rep4 1027.6641319613097 1027.66302993586 49.773 2 0.24837774324147896 0.00039635354736424893 0.0003140190216581063 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 134557 19693 VYSEAARVLQF True PC9_epitope_Rep1 1281.67173652289 1281.67062993586 80.575 2 0.24836376785779196 0.00039635354736424893 0.0003141197541046413 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 104300 20302 SQINKFLYL True PC9_epitope_Rep1 1124.62299542532 1124.62188993586 82.92 2 0.24835851685680066 0.00039635354736424893 0.0003141576108964233 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 94861 5654 RSYHLQIVTK True NCI_RA007_Epitope_Rep4 1243.7037053575098 1243.70206490379 28.354 3 0.2483463181939609 0.00039635354736424893 0.0003142455741173934 ['ENSG00000131203|ENST00000518237|IDO1'] 7951 7254 ATATANQIILK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 34.58 2 0.24832193722340468 0.00039635354736424893 0.00031442145663064064 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 89190 6540 QVSPEAGVQKV True PC9_epitope_Rep4 1140.6138872935999 1140.61278993586 32.283 2 0.2483113693090581 0.00039635354736424893 0.0003144977234399653 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 75798 11186 NLNLEPFSEK True H1975_Epitope_Rep3 1189.5979028762897 1189.5968099358602 48.125 2 0.2482862096332293 0.00039635354736424893 0.0003146793711199559 ['ENSG00000198959|ENST00000361475|TGM2'] 24163 19828 EYQELMNVKL True PC9_epitope_Rep5 1265.6325741328499 1265.6314699358602 81.314 2 0.24828466943677194 0.00039635354736424893 0.00031469049443753666 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 37900 6901 GYSFTTTAER True H1975_Epitope_Rep1 1131.51965255559 1131.5185499358602 31.584 2 0.24828382441634234 0.00039635354736424893 0.0003146965973528503 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 13755 17911 DQELYFFHEL True NCI_RA007_Epitope_Rep1 1339.6084675599898 1339.60736993586 73.808 2 0.2482806516569343 0.00039635354736424893 0.0003147195127480069 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 54154 4730 KVQEMNYIQK True NCI_RA007_Epitope_Rep3 1279.6594575870297 1279.65781490379 25.555 3 0.24826902921066266 0.00039635354736424893 0.0003148034706706411 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 133095 8742 VVQELQQAISK True NCI_RA007_Epitope_Rep2 1241.6979512707296 1241.6968499358602 38.651 2 0.24826718259376643 0.00039635354736424893 0.00031481681228061586 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 62150 14586 LLEKEILFY True H1975_Epitope_Rep3 1166.6587122276999 1166.6576099358601 61.474 2 0.2482549782189951 0.00039635354736424893 0.0003149050018414185 ['ENSG00000153147|ENST00000283131|SMARCA5'] 69506 16359 LVAVELEKV True PC9_epitope_Rep1 998.6011973515799 998.60010993586 67.745 2 0.24819820543410984 0.00039635354736424893 0.0003153155711914054 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 48927 6781 KEEDYIRYA True H1975_Epitope_Rep2 1185.56660274801 1185.56550993586 30.998 2 0.2481918434801461 0.00039635354736424893 0.00031536161298991925 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF'] 142618 13017 YYMKDLPTSF True NCI_RA007_Epitope_Rep4 1263.58456131127 1263.5834699358602 57.172 2 0.24818410711111583 0.00039635354736424893 0.0003154176105855563 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 128389 17110 VPRPAVLDPAL True PC9_epitope_Rep2 1146.67609362734 1146.6749899358601 71.063 2 0.2481594326492115 0.00039635354736424893 0.00031559627655655 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 27850 15952 FQDKDQVFI True PC9_epitope_Rep5 1138.56587447202 1138.56476993586 66.348 2 0.24814409233161863 0.00039635354736424893 0.00031570740582140646 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 139973 8462 YQDPDATSLKY True H1975_Epitope_Rep1 1299.59829679911 1299.5971899358601 37.478 2 0.24813947854388615 0.00039635354736424893 0.00031574083697805263 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 68271 7563 LTEDKETLQY True H1975_Epitope_Rep3 1238.60304782638 1238.6019499358601 34.072 2 0.24811512276192219 0.00039635354736424893 0.000315917375963854 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2'] 137203 19406 YAYDGKDYLAL True PC9_epitope_Rep1 1290.6132185872598 1290.6121299358601 79.455 2 0.24810461718766494 0.00039635354736424893 0.0003159935544842734 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 22423 11568 ETEQTKFWDY True H1975_Epitope_Rep3 1345.5826467349698 1345.58154993586 49.624 2 0.24809897811418843 0.00039635354736424893 0.00031603445239842913 ['ENSG00000196968|ENST00000372841|FUT11'] 141208 9274 YTADGKEVLEY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 40.584 2 0.24808472175573268 0.00039635354736424893 0.0003161378716582759 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 32067 11995 GESDDSILRLA True H1975_Epitope_Rep3 1174.58298108814 1174.58188993586 51.298 2 0.24806338464974806 0.00039635354736424893 0.00031629271986696023 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 54931 22035 KYPSPFFVF True PC9_epitope_Rep1 1130.5800679841798 1130.5789699358602 89.572 2 0.24802563706617778 0.00039635354736424893 0.00031656684891980197 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 78559 17045 NYQGHFHLF True PC9_epitope_Rep5 1161.5355774032498 1161.5344899358602 70.582 2 0.24802215127481295 0.00039635354736424893 0.00031659217531146774 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 131010 5121 VTDQASHIY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 24.773 2 0.24801911073491673 0.00039635354736424893 0.00031661426833963036 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 2423 11150 AEQFRLEQI True H1975_Epitope_Rep2 1132.5876725457597 1132.58656993586 47.925 2 0.24801070103506812 0.00039635354736424893 0.0003166753825563483 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 24178 15329 EYQKVWNLF True NCI_RA007_Epitope_Rep4 1225.6131590176099 1225.61206993586 66.621 2 0.2480073629250991 0.00039635354736424893 0.0003166996442488603 ['ENSG00000059378|ENST00000263549|PARP12'] 107507 8138 SVNNSIFYR True NCI_RA007_Epitope_Rep3 1098.54580773378 1098.54470993586 39.119 2 0.24800732598267053 0.00039635354736424893 0.00031669991276027983 ['ENSG00000204560|ENST00000376442|DHX16'] 22281 13859 ETDEKDFYLYY True H1975_Epitope_Rep2 1484.6347418774799 1484.6336499358601 58.454 2 0.24800474667891337 0.00039635354736424893 0.00031671866067123903 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 70043 11290 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6222899358602 48.404 2 0.24799673304925102 0.00039635354736424893 0.000316776915588604 ['CON__P02769'] 34152 9663 GNEDIITLR True NCI_RA007_Epitope_Rep2 1029.54547338061 1029.54436993586 42.205 2 0.24798822313795377 0.00039635354736424893 0.0003168387899770669 ['ENSG00000132646|ENST00000379143|PCNA'] 34172 19017 GNFNYIEFTR True PC9_epitope_Rep5 1259.5934862021898 1259.5923899358602 78.174 2 0.24796842539660363 0.00039635354736424893 0.0003169827835081905 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 22292 7694 ETDHINQIGY True H1975_Epitope_Rep2 1188.54111627616 1188.54000993586 34.548 2 0.2479436176647898 0.00039635354736424893 0.00031716330847734027 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 116273 12027 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 51.422 2 0.2479431333603254 0.00039635354736424893 0.00031716683376910396 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 3154 6945 AGDLLEDSPK True H1975_Epitope_Rep3 1043.51350454599 1043.5124099358602 31.675 2 0.24793714440375175 0.00039635354736424893 0.0003172104311202626 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000477306.1_1_1:156713442-156714029:-|nuORF'] 115084 14362 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61225490379 63.15 3 0.24786697535925356 0.00039635354736424893 0.0003177216832085258 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 109765 8380 TEDQFIRTP True H1975_Epitope_Rep2 1105.54038800017 1105.53928993586 37.186 2 0.24786422156723167 0.00039635354736424893 0.0003177417641931559 ['ENSG00000062822|ENST00000440232|POLD1'] 140955 8117 YSEYPPFSHRY True H1975_Epitope_Rep1 1444.6411646706 1444.64006993586 36.166 2 0.24784307884834042 0.00039635354736424893 0.00031789598185442676 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 127309 11935 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1313.6325745132897 1313.6314699358602 50.911 2 0.24783208473671958 0.00039635354736424893 0.00031797620394920153 ['CON__P02769'] 85831 12535 QHEEFVTSL True PC9_epitope_Rep6 1088.51383889916 1088.51274993586 59.65 2 0.2478301162186275 0.00039635354736424893 0.00031799057002117174 ['ENSG00000085872|ENST00000546361|CHERP'] 84184 11172 PYKVTQDEL True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 47.976 2 0.2478073582613642 0.00039635354736424893 0.00031815670285144886 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 12706 5706 DLEAHIDSANK True NCI_RA007_Epitope_Rep2 1211.57823006087 1211.57712993586 26.81 2 0.2477940004492128 0.00039635354736424893 0.0003182542552562375 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 8023 7906 ATDLTREVY True H1975_Epitope_Rep2 1066.5294889632999 1066.52838993586 35.358 2 0.2477657828924721 0.00039635354736424893 0.0003184604273147183 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 18537 13712 EKLEATINELV True NCI_RA007_Epitope_Rep1 1257.68163250025 1257.68052993586 57.352 2 0.24775095120607923 0.00039635354736424893 0.0003185688489716032 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 24181 15636 EYQKVWNLF True NCI_RA007_Epitope_Rep5 1225.6131590176099 1225.61206993586 66.851 2 0.24774765850427447 0.00039635354736424893 0.00031859292409217336 ['ENSG00000059378|ENST00000263549|PARP12'] 66186 8889 LSERADWQY True H1975_Epitope_Rep3 1166.5356369729 1166.53452993586 39.192 2 0.24770704304679983 0.00039635354736424893 0.000318890040638393 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 109923 5263 TEFTPTEKDE True NCI_RA007_Epitope_Rep4 1195.52446315251 1195.52336993586 26.79 2 0.24768373799663249 0.00039635354736424893 0.000319060650811778 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 45481 10575 IQLVEEELDR True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 45.63 2 0.24768171633148875 0.00039635354736424893 0.00031907545520648697 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 53302 13233 KQLDDLKVEL True PC9_epitope_Rep6 1199.6761531969898 1199.6745149037902 62.554 3 0.24767913958108895 0.00039635354736424893 0.00031909432541774285 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 102745 21343 SMVEDITGLRL True PC9_epitope_Rep5 1232.6434731697198 1232.6423699358602 87.154 2 0.24766439022109543 0.00039635354736424893 0.00031920236034030397 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 28543 15728 FSEPDFVAKFY True H1975_Epitope_Rep2 1348.63395403184 1348.6328499358601 65.67 2 0.24763596585933378 0.00039635354736424893 0.0003194106642648899 ['ENSG00000179933|ENST00000319074|C14orf119'] 73243 4379 MSEDKPQDY True H1975_Epitope_Rep2 1111.44919003727 1111.44808993586 21.955 2 0.24762334302198064 0.00039635354736424893 0.0003195032126447971 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 84765 4836 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 22.89 2 0.24759964394938755 0.00039635354736424893 0.0003196770426278959 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 24274 16507 EYTDVLQKI True PC9_epitope_Rep6 1107.58119018299 1107.58008993586 75.926 2 0.24759390784960544 0.00039635354736424893 0.0003197191305141565 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 24270 17558 EYTDVLQKI True PC9_epitope_Rep4 1107.58119018299 1107.58008993586 75.555 2 0.24758794635732725 0.00039635354736424893 0.0003197628780762039 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 38477 11040 HEQFIPIAA True H1975_Epitope_Rep2 1024.5341804209197 1024.53308993586 47.495 2 0.24756978768175683 0.00039635354736424893 0.0003198961699182471 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 56715 16760 LDLDGIIAEVK True NCI_RA007_Epitope_Rep1 1184.66525416012 1184.66414993586 69.318 2 0.24756892423691412 0.00039635354736424893 0.00031990250933130267 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 20953 15456 EQPETYYKW True PC9_epitope_Rep5 1242.5557037111398 1242.55460993586 64.462 2 0.24756483108352684 0.00039635354736424893 0.00031993256298223937 ['ENSG00000164880|ENST00000404767|INTS1'] 103996 15425 SQDARFYAL True PC9_epitope_Rep1 1069.51925863277 1069.5181699358602 64.151 2 0.24754357400636118 0.00039635354736424893 0.0003200886869017684 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 142384 16951 YYEKQFPEI True PC9_epitope_Rep5 1215.5811901829898 1215.58008993586 70.22 2 0.24753793257875997 0.00039635354736424893 0.0003201301335412021 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 24226 7202 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56954993586 32.518 2 0.24752965213429623 0.00039635354736424893 0.00032019097834855525 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 26163 20723 FHDDWISSI True PC9_epitope_Rep1 1118.5032742154601 1118.5021699358601 84.536 2 0.24752267014343726 0.00039635354736424893 0.0003202422911131052 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 59731 8361 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep1 1269.55471811541 1269.55362993586 36.523 2 0.2475214413873774 0.00039635354736424893 0.00032025132246655066 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 28950 9552 FTDQQKLIY True H1975_Epitope_Rep2 1154.5971746002997 1154.5960699358602 41.716 2 0.24751478689815914 0.00039635354736424893 0.0003203002373794887 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 45962 9270 ISEQTGKELLY True H1975_Epitope_Rep1 1279.66598243611 1279.6648899358602 40.568 2 0.24751123288879837 0.00039635354736424893 0.0003203263647761062 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 73347 7556 MTEGSTVNTEY True H1975_Epitope_Rep2 1230.50743318938 1230.50632993586 34.017 2 0.247507648743896 0.00039635354736424893 0.00032035271587915065 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 65952 14325 LSDTKYLEMIY True H1975_Epitope_Rep3 1374.6741045916601 1374.6730099358601 60.447 2 0.24748331801745693 0.00039635354736424893 0.0003205316560352938 ['ENSG00000205339|ENST00000379719|IPO7'] 71367 20205 LYRLQFNEF True PC9_epitope_Rep2 1228.6240580544797 1228.62296993586 83.135 2 0.24747388233845538 0.00039635354736424893 0.00032060107763551656 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 131005 13847 VTDPTGFLRM True H1975_Epitope_Rep2 1135.5695799534699 1135.56848993586 58.408 2 0.2474577665950775 0.00039635354736424893 0.00032071968167700625 ['ENSG00000100154|ENST00000397906|TTC28'] 24187 19003 EYQKVWNLF True PC9_epitope_Rep6 1225.6131590176099 1225.61206993586 85.738 2 0.24744267796720093 0.00039635354736424893 0.0003208307665240608 ['ENSG00000059378|ENST00000263549|PARP12'] 124661 20063 VGYDKDFLTI True PC9_epitope_Rep2 1169.5968402471299 1169.59574993586 82.578 2 0.24742392748830278 0.00039635354736424893 0.00032096886425224473 ['ENSG00000123066|ENST00000281928|MED13L'] 118187 12488 TYITSVSRL True PC9_epitope_Rep6 1038.57095985246 1038.5698699358602 59.454 2 0.24740968326967425 0.00039635354736424893 0.0003210738131000682 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 14322 7342 DSYSSSRSDLY True H1975_Epitope_Rep3 1278.5364248185401 1278.53532993586 33.218 2 0.24739395485566365 0.00039635354736424893 0.000321189737205087 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 40836 8290 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48724993586 36.838 2 0.24736562120037792 0.00039635354736424893 0.0003213986724041489 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 118046 12242 TYFEKNFNL True NCI_RA007_Epitope_Rep5 1174.56587447202 1174.56476993586 53.739 2 0.24735938776176217 0.00039635354736424893 0.0003214446566871433 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 16088 10525 EEAENTLQSFR True PC9_epitope_Rep6 1322.61025846514 1322.60916993586 51.273 2 0.24734442792099348 0.00039635354736424893 0.00032155504284292415 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 45737 9222 IRYPDSHQL True PC9_epitope_Rep1 1127.57235683479 1127.57071490379 40.324 3 0.2473438646692791 0.00039635354736424893 0.00032155919972523024 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 138066 15224 YGEPSEVFINR True PC9_epitope_Rep1 1309.6302656337298 1309.62916993586 63.379 2 0.24733931882737323 0.00039635354736424893 0.00032159275069400765 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 54313 14758 KYDEIFYNL True NCI_RA007_Epitope_Rep1 1203.5811901829898 1203.58008993586 61.462 2 0.24733091254314962 0.00039635354736424893 0.00032165480322927936 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 66181 8812 LSERADWQY True H1975_Epitope_Rep1 1166.5356369729 1166.53452993586 38.819 2 0.24729842292692886 0.00039635354736424893 0.0003218947442000698 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 32066 12183 GESDDSILRLA True H1975_Epitope_Rep2 1174.58298108814 1174.58188993586 51.943 2 0.24728895266314774 0.00039635354736424893 0.00032196471737416316 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 38903 18648 HHFEWIQKL True PC9_epitope_Rep1 1236.64037682496 1236.63874490379 76.518 3 0.24728106037859313 0.00039635354736424893 0.00032202304294478044 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 98696 21979 [Acetylation]-SGFLEELLGEK True H1975_Epitope_Rep1 1262.6394336513997 1262.6383299358602 91.427 2 0.24726384202261448 0.00039635354736424893 0.00032215032683091964 ['ENSG00000167693|ENST00000336868|NXN'] 74173 5278 NEEEIRANVA True H1975_Epitope_Rep2 1143.55201531303 1143.55090993586 25.362 2 0.24726098469385763 0.00039635354736424893 0.00032217145404699055 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 125942 10445 VLDEADLSRY True H1975_Epitope_Rep3 1179.57716743171 1179.57606993586 45.236 2 0.24725468083691116 0.00039635354736424893 0.0003222180699596008 ['ENSG00000204970|ENST00000504120|PCDHA1', 'PCDHA1|p.C759Lfs*3|1|0.36|ENSG00000204970|chr5:140788564-140788565|-/T|frameshift_variant', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1', 'PCDHA1|p.R635H|1|0.3|ENSG00000204970|chr5:140788194-140788194|G/A|missense_variant'] 40814 6625 HSDLLEDSKY True H1975_Epitope_Rep3 1205.55643198713 1205.55532993586 30.435 2 0.2472379310497831 0.00039635354736424893 0.000322341964548247 ['ENSG00000171428|ENST00000307719|NAT1'] 70045 11321 LVNELTEFAK True H1975_Epitope_Rep3 1162.6233893481399 1162.6222899358602 48.654 2 0.2472262930272202 0.00039635354736424893 0.0003224280766317487 ['CON__P02769'] 95956 8775 RYLEQLHQL True NCI_RA007_Epitope_Rep1 1198.64585612822 1198.64422490379 38.133 3 0.2472231869262321 0.00039635354736424893 0.0003224510632006714 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 91068 20697 RFLNDPGHLLW True PC9_epitope_Rep3 1366.7146043943799 1366.71295490379 84.885 3 0.24721206835963144 0.00039635354736424893 0.00032253335915110763 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 55039 7939 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 37.226 2 0.24720818160465902 0.00039635354736424893 0.0003225621325925694 ['ENSG00000143546|ENST00000368733|S100A8'] 14321 7333 DSYSSSRSDLY True H1975_Epitope_Rep2 1278.5364248185401 1278.53532993586 33.147 2 0.24719252014436566 0.00039635354736424893 0.00032267809963667143 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 62639 11199 LLLEPYNKY True H1975_Epitope_Rep1 1151.62266107215 1151.6215699358602 48.046 2 0.24719020281519405 0.00039635354736424893 0.00032269526211109543 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 90084 5447 REAEHLYHTL True NCI_RA007_Epitope_Rep4 1267.6309343400699 1267.62928490379 27.532 3 0.2471869424370221 0.00039635354736424893 0.00032271941049235176 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 26834 9438 FLDANVKESY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 41.272 2 0.24717441050926484 0.00039635354736424893 0.0003228122465838258 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-2|HPS1'] 73796 19585 NAIDRLVNI True PC9_epitope_Rep1 1026.5821932425 1026.58108993586 80.161 2 0.2471584394573548 0.00039635354736424893 0.00032293059839855247 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 90579 8805 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 38.834 2 0.24715328364590308 0.00039635354736424893 0.0003229688142904203 ['ENSG00000026025|ENST00000544301|VIM'] 140889 10435 YSEDRIGLADY True H1975_Epitope_Rep1 1300.59354577184 1300.59244993586 45.092 2 0.24715254626334726 0.00039635354736424893 0.0003229742802860623 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 21524 12458 ERMPEQIRL True PC9_epitope_Rep1 1170.61792712822 1170.61627490379 52.785 3 0.24713224327950753 0.00039635354736424893 0.0003231248166552981 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 21035 9526 EQSVQEIPVSR True PC9_epitope_Rep3 1270.6517293542997 1270.65062993586 41.589 2 0.24712780005544993 0.00039635354736424893 0.00032315777029884557 ['CON__P06868'] 90080 5153 REAEHLYHTL True H1975_Epitope_Rep2 1267.6309343400699 1267.62928490379 24.898 3 0.24711713296622526 0.00039635354736424893 0.0003232368976565538 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 95246 14812 RVLQALEGLK True PC9_epitope_Rep5 1125.6869926642098 1125.6853349037901 61.974 3 0.2470722901390712 0.00039635354736424893 0.0003235697496279801 ['ENSG00000105372|ENST00000598742|RPS19'] 65770 11561 LSDFGLERY True H1975_Epitope_Rep2 1098.53457434374 1098.53346993586 49.532 2 0.24705302275029087 0.00039635354736424893 0.0003237128699701319 ['nc|ENSG00000165480|Q8IX90-3|SKA3', 'ENST00000298260.8_1_13:21729833-21750660:-|nuORF', 'ENSG00000165480|ENST00000314759|SKA3'] 139503 5593 YLSEVASGDNK True NCI_RA007_Epitope_Rep1 1181.5564319871298 1181.55532993586 25.82 2 0.24702896494064547 0.00039635354736424893 0.00032389166321127006 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion'] 10085 15133 AYTLLLHTW True NCI_RA007_Epitope_Rep4 1116.59678067748 1116.59627496793 65.781 1 0.24702477007972024 0.00039635354736424893 0.00032392284878655263 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 70312 7821 LVSESSDVLPK True H1975_Epitope_Rep3 1172.6288686514001 1172.6277699358602 35.062 2 0.24701873024475834 0.00039635354736424893 0.0003239677556176965 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 78185 14634 NYAWVYYHL True NCI_RA007_Epitope_Rep3 1227.57129420563 1227.57018993586 64.916 2 0.24698791378825302 0.00039635354736424893 0.0003241969765244826 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant', 'ENSG00000119917|ENST00000371818|IFIT3'] 73839 15986 NALRELETV True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 66.481 2 0.2469754137121345 0.00039635354736424893 0.00032429000173064555 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000489129.5_1_15:63032816-63046163:+|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 142736 14441 YYQHIVTTL True PC9_epitope_Rep2 1136.5866099166 1136.58550993586 60.816 2 0.24695060791482717 0.00039635354736424893 0.0003244746850221617 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 71796 16010 [Acetylation]-M[Oxidation]EGPLSVFGDR True H1975_Epitope_Rep3 1264.57578822946 1264.57468993586 67.039 2 0.24691512817138456 0.00039635354736424893 0.00032473902092623676 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000544255.5_1_6:160208889-160210626:-|nuORF', 'ENST00000537390.5_3_6:160209690-160210626:-|nuORF', 'ENST00000546023.1_1_6:160210218-160210626:-|nuORF', 'ENST00000536607.1_1_6:160208906-160210500:-|nuORF', 'ENST00000543532.5_1_6:160205081-160210626:-|nuORF'] 134882 15953 VYVQHPITF True PC9_epitope_Rep5 1102.5811306133398 1102.58002993586 66.352 2 0.24687912282856297 0.00039635354736424893 0.0003250074934643308 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 24950 11085 FDAGELITQR True H1975_Epitope_Rep3 1148.5825871653199 1148.5814899358602 47.731 2 0.24687536103056526 0.00039635354736424893 0.0003250355560126191 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 4614 9902 ALAAAGYDVEK True PC9_epitope_Rep3 1106.56078909158 1106.5596899358602 43.045 2 0.24683490963769877 0.00039635354736424893 0.00032533747197731507 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 130882 9045 VTDAVALRV True H1975_Epitope_Rep2 942.5498304850599 942.54872993586 39.744 2 0.2468342833327694 0.00039635354736424893 0.00032534214872231924 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'FIBP|p.D157Tfs*38|1|0.34|ENSG00000172500|chr11:65886365-65886365|C/-|frameshift_variant', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 89429 14516 QYDPYTDSRF True PC9_epitope_Rep5 1290.55168095986 1290.5505899358602 60.835 2 0.2468122460295482 0.00039635354736424893 0.00032550674862382497 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 142710 17074 YYQEYPM[Oxidation]SI True PC9_epitope_Rep5 1208.5059770178398 1208.5048699358601 70.694 2 0.24679746834549168 0.00039635354736424893 0.000325617172115477 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 120215 10186 VEAQVYILSK True NCI_RA007_Epitope_Rep2 1148.6441247927198 1148.64302993586 44.209 2 0.24679467052510898 0.00039635354736424893 0.000325638082535537 ['ENSG00000178952|ENST00000313511|TUFM', 'ENST00000569217.1_1_16:28854298-28855510:-|nuORF'] 64920 4971 LQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep1 1061.51754476105 1061.51644993586 23.418 2 0.24677842271769768 0.00039635354736424893 0.000325759542421905 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 320 19377 AAIDWFDGK True PC9_epitope_Rep1 1021.4868958753299 1021.48578993586 79.343 2 0.24676755251403681 0.00039635354736424893 0.00032584082758960664 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 18535 13260 EKLEATINELV True H1975_Epitope_Rep1 1257.68163250025 1257.68052993586 56.103 2 0.24675687406591715 0.00039635354736424893 0.0003259206986506314 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 26318 18119 FHNELLTQL True PC9_epitope_Rep4 1113.5818588893299 1113.5807699358602 77.759 2 0.24675301229043284 0.00039635354736424893 0.00032594958821512463 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 12954 16764 DLLEVADVLEK True H1975_Epitope_Rep1 1242.67073346338 1242.66962993586 69.883 2 0.24672983318579603 0.00039635354736424893 0.00032612304279382593 ['ENST00000509696.5_1_4:7062591-7066009:-|nuORF', 'ENSG00000109519|ENST00000264954|GRPEL1'] 25466 13580 FEELNADLFR True H1975_Epitope_Rep3 1252.6088019131598 1252.6077099358602 57.518 2 0.24672722414786064 0.00039635354736424893 0.00032614257261985016 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 73260 9448 MSEERTLLY True H1975_Epitope_Rep2 1140.54851015572 1140.54740993586 41.309 2 0.24669945607490457 0.00039635354736424893 0.00032635050184554097 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28', 'ENST00000510312.6_1_5:73178320-73193923:+|nuORF'] 134891 16474 VYVQNVVKL True PC9_epitope_Rep1 1060.6280808057597 1060.6269899358601 68.193 2 0.24665716297834306 0.00039635354736424893 0.00032666745086512783 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 57201 11718 LDVQFSGLTK True NCI_RA007_Epitope_Rep1 1106.5971746003 1106.5960699358602 49.556 2 0.24665227224852823 0.00039635354736424893 0.0003267041224247452 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 74013 12030 NDEELNKLLGK True PC9_epitope_Rep6 1271.6721304457099 1271.6710299358601 57.568 2 0.24662417690445984 0.00039635354736424893 0.0003269148662785574 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 92863 9804 RPFEDQTSL True PC9_epitope_Rep6 1091.52473793603 1091.52364993586 48.165 2 0.2466166030881229 0.00039635354736424893 0.0003269717009795537 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 86113 20927 QHVQEWWEL True PC9_epitope_Rep1 1253.5829215184897 1253.58182993586 85.317 2 0.2466107444399383 0.00039635354736424893 0.0003270156716772895 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1'] 5836 13219 APFDLFENR True H1975_Epitope_Rep1 1107.53490869691 1107.53380993586 55.944 2 0.24660634227830808 0.00039635354736424893 0.00032704871496104905 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 85749 17182 QHDFTSQIF True PC9_epitope_Rep2 1121.51417325233 1121.5130699358601 71.349 2 0.24656325874670987 0.00039635354736424893 0.0003273722831640386 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 27905 11719 FQEAEEFLYR True H1975_Epitope_Rep3 1330.61936659686 1330.61826993586 50.218 2 0.24654075886933613 0.00039635354736424893 0.00032754139049340333 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000560592.5_1_14:24614852-24615790:-|nuORF', 'ENST00000559493.5_1_14:24614434-24615772:-|nuORF'] 113801 11824 TNAENEFVTIK True PC9_epitope_Rep4 1264.6299312805597 1264.62882993586 53.249 2 0.2465210452440496 0.00039635354736424893 0.00032768962855844204 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 57841 8998 LEEVTGKLQVA True H1975_Epitope_Rep2 1185.66050313285 1185.6594099358601 39.562 2 0.24647897408327438 0.00039635354736424893 0.00032800621077665805 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 105630 8740 SSDSVGGFRY True H1975_Epitope_Rep2 1073.47778774361 1073.4766899358601 38.58 2 0.24640778973189037 0.00039635354736424893 0.00032854256608620154 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 74544 6207 NFSDNQLQEGK True NCI_RA007_Epitope_Rep2 1278.5840437173 1278.5829499358601 28.751 2 0.24635641836438796 0.00039635354736424893 0.0003289301820315137 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 2212 14627 AEMLYGLIHA True H1975_Epitope_Rep2 1116.56376629704 1116.5626699358602 61.422 2 0.24635142638998977 0.00039635354736424893 0.000328967872758289 ['ENST00000468255.5_1_6:31633906-31636470:+|nuORF', 'ENST00000481269.1_1_6:31633906-31636957:+|nuORF', 'ENSG00000204435|ENST00000375882|CSNK2B', 'chr6:31669172-31669328|533|10.16|0.0|19.95|+|ENST00000677536|CSNK2B,CSNK2B'] 95291 6195 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.6641699358602 31.377 2 0.2463507884120115 0.00039635354736424893 0.00032897268997280536 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 37753 21529 GWYDEEHPLVF True PC9_epitope_Rep1 1390.6193665968601 1390.61826993586 87.64 2 0.24634455309204759 0.00039635354736424893 0.00032901977506149545 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 133498 21338 VWFRIPNQF True PC9_epitope_Rep3 1205.6345631685297 1205.6334699358601 87.372 2 0.24633347931169663 0.00039635354736424893 0.0003291034137199647 ['ENSG00000013583|ENST00000014930|HEBP1'] 28969 13165 FTDVNSILRY True H1975_Epitope_Rep1 1226.62953735774 1226.62844993586 55.734 2 0.2463256626407299 0.00039635354736424893 0.0003291624647382093 ['ENSG00000136628|ENST00000366923|EPRS1'] 131419 16314 VTIEDVQKL True PC9_epitope_Rep1 1043.58627556343 1043.5851699358602 67.57 2 0.24630889411995488 0.00039635354736424893 0.00032928917832427 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 140822 5027 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 24.416 2 0.24628751049253023 0.00039635354736424893 0.00032945083754415205 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 111217 5825 THISSQNSEL True PC9_epitope_Rep1 1114.52546621202 1114.52436993586 27.22 2 0.24628703042181863 0.00039635354736424893 0.00032945446776939903 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 4877 6674 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep5 1219.5754535599897 1219.57434993586 30.643 2 0.24627475829174386 0.00039635354736424893 0.00032954728146032767 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 133648 10991 VYANGIRNI True PC9_epitope_Rep1 1018.5559784946599 1018.55488993586 47.166 2 0.24625453882369217 0.00039635354736424893 0.00032970025777804705 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 92523 20999 RLYPWGVVEV True PC9_epitope_Rep5 1216.6604435631998 1216.65934993586 85.836 2 0.24624046758708193 0.00039635354736424893 0.00032980675986385855 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 96044 19601 RYLPTGSFPFL True PC9_epitope_Rep6 1296.6866583110398 1296.68556993586 88.055 2 0.24623475654481825 0.00039635354736424893 0.0003298499953239406 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 17990 15291 EIDMNDIKAFY True H1975_Epitope_Rep3 1357.62240337197 1357.6213099358602 64.225 2 0.24622474492831622 0.00039635354736424893 0.00032992580200677605 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 120540 12115 VEFTRSLFVN True NCI_RA007_Epitope_Rep3 1210.6346227381798 1210.63352993586 54.769 2 0.2462145984816221 0.00039635354736424893 0.00033000264743033333 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 78685 19265 NYYKVNWTF True PC9_epitope_Rep4 1233.5818588893296 1233.5807699358602 82.206 2 0.2462063416622855 0.00039635354736424893 0.00033006519476179777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 68228 7351 LTEAGDYTAKY True H1975_Epitope_Rep2 1230.57683307854 1230.5757299358602 33.216 2 0.2462021914621693 0.00039635354736424893 0.00033009663798417866 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 100283 12666 SIYYITGESK True PC9_epitope_Rep3 1159.57610480255 1159.5750099358602 53.745 2 0.24618065754714527 0.00039635354736424893 0.00033025983393120383 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 142869 18816 YYTKGFALL True PC9_epitope_Rep4 1074.5749826037397 1074.57388993586 80.461 2 0.2461797593669961 0.00039635354736424893 0.0003302666425956328 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 53290 15634 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6745149037902 65.282 3 0.24616849890562098 0.00039635354736424893 0.000330352014590393 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 106400 10946 STIFYYVQK True NCI_RA007_Epitope_Rep5 1147.5913609438696 1147.59026993586 48.742 2 0.24615092892429166 0.00039635354736424893 0.0003304852668649255 ['ENSG00000092148|ENST00000399332|HECTD1'] 119892 9427 VDINAPDVDVR True H1975_Epitope_Rep1 1211.61461556959 1211.61350993586 41.173 2 0.24614831824025682 0.00039635354736424893 0.00033050507111939134 ['ENSG00000124942|ENST00000378024|AHNAK'] 103181 11502 SPIENIQRVAA True PC9_epitope_Rep6 1196.6513354314802 1196.6502299358601 55.32 2 0.24614624562070275 0.00039635354736424893 0.0003305207945454063 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 118092 17960 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 81.711 2 0.24614003323688874 0.00039635354736424893 0.000330567927783374 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 108305 20572 SYIRPEDIVNF True PC9_epitope_Rep3 1351.67721582615 1351.67610993586 84.396 2 0.2461283007512734 0.00039635354736424893 0.00033065696031258507 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 10081 14571 AYTLLLHTW True NCI_RA007_Epitope_Rep3 1116.59678067748 1116.59568993586 64.646 2 0.24607226327153037 0.00039635354736424893 0.0003310825352055334 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 134561 19615 VYSEAARVLQF True PC9_epitope_Rep5 1281.67173652289 1281.67062993586 80.501 2 0.24604997001056308 0.00039635354736424893 0.0003312519933527228 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 40968 4562 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.60641490379 22.655 3 0.24604332402118492 0.00039635354736424893 0.00033130252845197034 ['nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 119745 14669 VAYEEFEKV True PC9_epitope_Rep2 1112.5389910178399 1112.5378899358602 61.69 2 0.24600186062402363 0.00039635354736424893 0.00033161798446964456 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 133776 12828 VYERELQTF True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 57.205 2 0.24597536901804282 0.00039635354736424893 0.00033181969187133135 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 133916 7221 VYIHHFDRI True NCI_RA007_Epitope_Rep4 1198.6247267608198 1198.62307490379 34.409 3 0.24591843719311618 0.00039635354736424893 0.0003322535878346495 ['ENSG00000172081|ENST00000357066|MOB3A'] 54418 13607 KYFLWEEKF True NCI_RA007_Epitope_Rep2 1288.6492101731599 1288.64810993586 57.568 2 0.2459172900497047 0.00039635354736424893 0.0003322623364325404 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 134144 17813 VYLDKFIRL True PC9_epitope_Rep6 1165.68593003505 1165.68482993586 81.149 2 0.24591683264560343 0.00039635354736424893 0.00033226582485291155 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 74916 14905 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69592490379 65.273 3 0.24590425523516943 0.00039635354736424893 0.0003323617616334055 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 45407 7282 IQEVADELQK True NCI_RA007_Epitope_Rep2 1171.6084675599898 1171.60736993586 32.946 2 0.2458913215134241 0.00039635354736424893 0.00033246044521881963 ['ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 94924 3789 RTFSYIKNK True NCI_RA007_Epitope_Rep4 1155.6400424717897 1155.63838490379 20.751 3 0.24584764398092418 0.00039635354736424893 0.0003327939195822385 ['ENSG00000170776|ENST00000394518|AKAP13', 'AKAP13|p.S1795Qfs*12|1|0.29|ENSG00000170776|chr15:85693365-85693366|-/T|frameshift_variant', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13', 'ENST00000560957.1_1_15:86225432-86228206:+|nuORF'] 122072 20238 VFYPYPQYF True PC9_epitope_Rep6 1222.5698972232997 1222.5688099358601 90.529 2 0.24582862231583827 0.00039635354736424893 0.0003329392532497432 ['ENSG00000103160|ENST00000219439|HSDL1'] 34934 5105 GQNPTNAEVLK True NCI_RA007_Epitope_Rep4 1169.6040508858898 1169.6029499358601 26.146 2 0.24582101443442525 0.00039635354736424893 0.00033299739853753606 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 15149 7537 EAAENSLVAYK True NCI_RA007_Epitope_Rep2 1193.5928174958497 1193.59172993586 33.943 2 0.24580460872609983 0.00039635354736424893 0.00033312281824819727 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE'] 23687 20861 EYDNFFQHL True PC9_epitope_Rep1 1211.5247379360299 1211.52364993586 85.067 2 0.24579183959436274 0.00039635354736424893 0.00033322046953867884 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF'] 972 5071 ADTQTYQPYNK True NCI_RA007_Epitope_Rep2 1327.6044448087098 1327.60334993586 24.35 2 0.24573637478115865 0.00039635354736424893 0.00033364496712683827 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF'] 140749 11089 YSDDNPYYNY True H1975_Epitope_Rep3 1312.48841199696 1312.4873099358601 47.746 2 0.24572288351118363 0.00039635354736424893 0.00033374830395161705 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 141029 7932 YSLDPENPTK True NCI_RA007_Epitope_Rep5 1162.5506183307 1162.5495299358602 37.201 2 0.24570818951265203 0.00039635354736424893 0.0003338608896275688 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'ENST00000581091.1_1_18:47017762-47017941:-|nuORF'] 74904 16981 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69646993586 70.14 2 0.2456983494995753 0.00039635354736424893 0.0003339363052710228 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 54587 13438 KYITQGQLLQF True NCI_RA007_Epitope_Rep4 1337.73433677945 1337.7332299358602 58.878 2 0.2456965915035743 0.00039635354736424893 0.0003339497806693965 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 15973 7748 EDQTEYLEER True NCI_RA007_Epitope_Rep1 1310.5626395663799 1310.56154993586 34.13 2 0.24568647476243854 0.00039635354736424893 0.0003340273381544413 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 72707 14336 [Acetylation]-M[Oxidation]M[Oxidation]PTPVILLK True H1975_Epitope_Rep3 1215.66070453417 1215.65960993586 60.491 2 0.24568324350285162 0.00039635354736424893 0.00033405211360953323 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'ENST00000464397.1_1_2:73461506-73466971:+|nuORF'] 49145 5768 KELEGVITKA True NCI_RA007_Epitope_Rep4 1086.62847472858 1086.62736993586 28.806 2 0.24568163309382496 0.00039635354736424893 0.0003340644619952314 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 9648 20274 AYDTVRWEF True PC9_epitope_Rep3 1185.5454733806098 1185.54436993586 83.24 2 0.24567569837848288 0.00039635354736424893 0.00033410997249378886 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 13521 5456 DNQLSEVANK True H1975_Epitope_Rep3 1116.54111627616 1116.54000993586 26.042 2 0.24563516744209818 0.00039635354736424893 0.00033442095115204096 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENST00000476468.5_2_10:103912191-103916993:+|nuORF'] 85899 19536 QHFNGLLEI True PC9_epitope_Rep2 1069.55564414149 1069.5545499358602 80.529 2 0.24561038585216624 0.00039635354736424893 0.00033461123395197933 ['nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 15098 20787 DYVEGLRVF True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 84.787 2 0.24558150373333856 0.00039635354736424893 0.0003348331392283991 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 49928 17369 KILDLETQL True PC9_epitope_Rep6 1071.61757569171 1071.61646993586 79.425 2 0.24556795802731707 0.00039635354736424893 0.00033493726357078737 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 59823 5924 LGEYEDVSR True H1975_Epitope_Rep3 1066.49310345458 1066.49200993586 27.795 2 0.24556312764004948 0.00039635354736424893 0.00033497440207587784 ['ENST00000589308.1_1_19:36606815-36612715:+|nuORF', 'nc|ENSG00000105254|Q99426-2|TBCB', 'ENST00000392178.8_1_19:36606435-36612715:+|nuORF', 'ENSG00000105254|ENST00000221855|TBCB'] 99361 9902 [Acetylation]-SHTILLVQPTK True H1975_Epitope_Rep1 1277.7343370957499 1277.7332299358602 43.024 2 0.24554838987660074 0.00039635354736424893 0.0003350877391122885 ['ENSG00000100632|ENST00000557016|ERH'] 67942 11274 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 48.342 2 0.2455469751524709 0.00039635354736424893 0.00033509862071234555 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 133996 6929 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5287299358602 33.338 2 0.24552660361674483 0.00039635354736424893 0.0003352553512633523 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 28367 11536 FRVKYETEL True PC9_epitope_Rep4 1183.62372370131 1183.62262993586 52.136 2 0.24551798416539625 0.00039635354736424893 0.0003353216880464254 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 132593 5225 VVEVTHDLQK True NCI_RA007_Epitope_Rep2 1166.6295373577398 1166.62844993586 24.944 2 0.24551567942396574 0.00039635354736424893 0.00033533942796376255 ['ENSG00000149257|ENST00000358171|SERPINH1'] 14405 12591 DTDISLIRY True H1975_Epitope_Rep3 1094.5607890915799 1094.5596899358602 53.634 2 0.24549604907361822 0.00039635354736424893 0.0003354905636663309 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 14402 10608 DTDHYFLRY True H1975_Epitope_Rep2 1228.5512870370399 1228.55018993586 45.827 2 0.24548336294674744 0.00039635354736424893 0.0003355882715451917 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 25796 12369 FEWENKVTV True NCI_RA007_Epitope_Rep1 1150.56587447202 1150.56476993586 52.086 2 0.24545971430782068 0.00039635354736424893 0.00033577048829317347 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 118033 14532 TYESIFSHF True NCI_RA007_Epitope_Rep4 1129.50802524273 1129.5069299358602 63.27 2 0.24544621034252911 0.00039635354736424893 0.00033587458311850525 ['ENST00000530761.5_1_11:117857521-117870353:+|nuORF', 'ENSG00000110324|ENST00000227752|IL10RA'] 54985 16370 KYQEVTNNLEF True PC9_epitope_Rep5 1383.6670450652698 1383.66594993586 67.963 2 0.2454375992821391 0.00039635354736424893 0.0003359409780601726 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 115751 15511 TSDDPWLTAY True H1975_Epitope_Rep2 1167.5084191655499 1167.50732993586 64.819 2 0.2454250635899483 0.00039635354736424893 0.00033603765710962666 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 130930 5953 VTDGPGNYKY True H1975_Epitope_Rep2 1112.51383889916 1112.51274993586 27.881 2 0.24542459555941346 0.00039635354736424893 0.00033604126724287575 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 41968 5002 IDEM[Oxidation]PEAAVK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 24.369 2 0.24541053265349633 0.00039635354736424893 0.000336149759000165 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 142370 15309 YYEKLHTYF True PC9_epitope_Rep1 1262.5971746003 1262.5960699358602 63.707 2 0.24540137490240238 0.00039635354736424893 0.0003362204276127553 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 138058 14582 YGEPGEVFINK True PC9_epitope_Rep3 1251.6135529404298 1251.61244993586 61.217 2 0.24539154430363383 0.00039635354736424893 0.000336296305041575 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 130880 8723 VTDAVALRV True H1975_Epitope_Rep1 942.5498304850599 942.54872993586 38.481 2 0.24539024017746147 0.00039635354736424893 0.00033630637222304305 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'FIBP|p.D157Tfs*38|1|0.34|ENSG00000172500|chr11:65886365-65886365|C/-|frameshift_variant', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 42778 10194 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 44.215 2 0.24536052199299932 0.00039635354736424893 0.00033653586320326863 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 18791 19050 ELDETKIIL True PC9_epitope_Rep1 1072.6015912743999 1072.6004899358602 78.067 2 0.2453563401112726 0.00039635354736424893 0.00033656816930229634 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 134006 9286 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 41.06 3 0.24532419161493202 0.00039635354736424893 0.00033681662847316336 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 95156 7945 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67816490379 38.359 3 0.2453240793610856 0.00039635354736424893 0.00033681749634746866 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 88599 11449 QTDPVTLQY True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 49.093 2 0.24531835726800882 0.00039635354736424893 0.0003368617388493984 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 103174 13540 SPIENIQRVAA True PC9_epitope_Rep1 1196.6513354314802 1196.6502299358601 56.938 2 0.24531767116502795 0.00039635354736424893 0.0003368670441023479 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 82071 10510 PM[Oxidation]FIVNTNVPR True NCI_RA007_Epitope_Rep1 1302.6754423847801 1302.6743499358602 44.865 2 0.24531295876288342 0.00039635354736424893 0.00033690348475249855 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 18374 12792 EITALAPSTMK True PC9_epitope_Rep3 1160.61111041228 1160.61000993586 54.226 2 0.24530559854583078 0.00039635354736424893 0.00033696040866394516 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 25648 4702 FEQAGEPRQP True H1975_Epitope_Rep3 1157.5465360097699 1157.54542993586 23.211 2 0.24528597871287486 0.00039635354736424893 0.0003371121955567785 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 36259 8687 GVDSSIFQNPK True NCI_RA007_Epitope_Rep5 1190.59315184902 1190.5920499358601 40.079 2 0.2452830226407359 0.00039635354736424893 0.00033713507085830004 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 47840 14313 IYHDLEQSI True PC9_epitope_Rep5 1116.54513902744 1116.5440499358601 60.058 2 0.24528159383121723 0.00039635354736424893 0.00033714612813175106 ['nc|ENSG00000100266|Q9UNF0-2|PACSIN2', 'ENSG00000100266|ENST00000263246|PACSIN2'] 90965 6647 REYWNEQSA True NCI_RA007_Epitope_Rep5 1181.51015050105 1181.50904993586 32.238 2 0.24525193537277246 0.00039635354736424893 0.00033737573119405154 ['ENSG00000065308|ENST00000182527|TRAM2'] 78188 20951 NYAWVYYHL True PC9_epitope_Rep5 1227.57129420563 1227.57018993586 85.647 2 0.24525170551069284 0.00039635354736424893 0.00033737751129983557 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant', 'ENSG00000119917|ENST00000371818|IFIT3'] 118319 19649 TYLVDMQRF True PC9_epitope_Rep5 1171.5695799534699 1171.56848993586 80.636 2 0.24524578264170335 0.00039635354736424893 0.0003374233826326398 ['ENSG00000180340|ENST00000315323|FZD2'] 106267 4841 STESLQANVQR True NCI_RA007_Epitope_Rep5 1231.6156781987497 1231.61458993586 25.312 2 0.24519785220332674 0.00039635354736424893 0.00033779482361798955 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 29762 12099 FVNVVPTFGK True H1975_Epitope_Rep3 1106.6124307416198 1106.61132993586 51.703 2 0.245190639979372 0.00039635354736424893 0.0003378507508359804 ['ENSG00000149806|ENST00000529639|FAU'] 108562 21667 SYNNFFRMF True PC9_epitope_Rep3 1224.53861417836 1224.53750993586 88.64 2 0.24518688683200296 0.00039635354736424893 0.0003378798583045136 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 44059 19846 IILEEGKEILV True PC9_epitope_Rep3 1254.7435044808199 1254.74240993586 81.573 2 0.24518425611413414 0.00039635354736424893 0.0003379002622897906 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 53776 10067 KTAAEDAIRNL True PC9_epitope_Rep2 1200.6462500510397 1200.64459490379 44.053 3 0.24518417404509232 0.00039635354736424893 0.0003379008988414408 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'RBM4-DPP3|1|fusion', 'ENSG00000173914|ENST00000310046|RBM4B'] 62015 8993 LLDQGQLNKY True H1975_Epitope_Rep2 1190.62953735774 1190.62844993586 39.545 2 0.24516241684729348 0.00039635354736424893 0.0003380696964957039 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 95659 12227 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.5869099358601 52.343 2 0.24516136443381217 0.00039635354736424893 0.0003380778635200852 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 108301 12548 SYIQRLVQI True NCI_RA007_Epitope_Rep3 1118.64479349906 1118.64368993586 56.594 2 0.2451218504602402 0.00039635354736424893 0.0003383846462646265 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'SAMHD1|p.E417Kfs*6|1|0.22|ENSG00000101347|chr20:36911239-36911239|C/-|frameshift_variant', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1', 'SAMHD1|p.R339Vfs*5|1|0.31|ENSG00000101347|chr20:36916769-36916769|G/-|frameshift_variant'] 133802 19953 VYFPDQHINF True PC9_epitope_Rep5 1278.6033226099 1278.6022299358601 81.802 2 0.2451149208775113 0.00039635354736424893 0.00033843847565080654 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 68431 4951 LTEVNKAGTQY True H1975_Epitope_Rep2 1222.61936659686 1222.61826993586 24.127 2 0.2451130904978898 0.00039635354736424893 0.00033845269557559456 ['ENSG00000170542|ENST00000380698|SERPINB9'] 134270 19468 VYNEQIRDLL True PC9_epitope_Rep5 1261.6666511424498 1261.66554993586 79.936 2 0.24507498866469782 0.00039635354736424893 0.00033874883866517414 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF'] 30108 19646 FYLEGGFSKF True PC9_epitope_Rep4 1193.57571087973 1193.57460993586 83.686 2 0.2450581107153056 0.00039635354736424893 0.0003388801040459674 ['ENSG00000139318|ENST00000279488|DUSP6'] 114438 6152 TPVEPEVAIHR True NCI_RA007_Epitope_Rep5 1246.6669854956199 1246.6653449037901 30.343 3 0.24505596909631552 0.00039635354736424893 0.00033889676376962875 ['nc|ENSG00000008988|P60866-2|RPS20', 'ENST00000521289.5_1_8:56986544-56986942:-|nuORF', 'ENSG00000008988|ENST00000009589|RPS20'] 118253 11805 TYLEKAIKI True PC9_epitope_Rep6 1077.6433965167298 1077.6422899358602 56.599 2 0.24504240527050652 0.00039635354736424893 0.0003390022962849684 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 133773 14355 VYERELQTF True PC9_epitope_Rep1 1183.5873381925899 1183.58624993586 60.04 2 0.24503235328772027 0.00039635354736424893 0.0003390805263802262 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 130159 8093 VSDYLRQSY True H1975_Epitope_Rep3 1129.54038800017 1129.53928993586 36.104 2 0.24500786997512555 0.00039635354736424893 0.0003392711448249532 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.Q827Lfs*8|1|0.09|ENSG00000189079|chr12:45850603-45850619|AACCTGTGCAAACTTCA/-|frameshift_variant', 'ARID2|p.L161Cfs*11|1|0.36|ENSG00000189079|chr12:45817733-45817734|TG/-|frameshift_variant', 'ARID2|p.S218Pfs*74|1|0.08|ENSG00000189079|chr12:45821431-45821431|T/-|frameshift_variant'] 39473 8917 HLDEAQRLLY True H1975_Epitope_Rep3 1256.65133543148 1256.6502299358601 39.299 2 0.24500784342171056 0.00039635354736424893 0.0003392713516188077 ['ENST00000600421.1_1_19:57901368-57922291:+|nuORF', 'nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547', 'nc|ENSG00000188785|Q8NEK5|ZNF548', 'ENSG00000188785|ENST00000336128|ZNF548'] 34809 12326 GQIDADELQRC True PC9_epitope_Rep1 1246.5612000977399 1246.56010993586 52.268 2 0.24496396904259146 0.00039635354736424893 0.0003396132111375603 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000489079.1_1_7:87840172-87856229:-|nuORF', 'ENST00000488015.5_1_7:87840172-87849341:-|nuORF'] 134130 12820 VYLDKFIRL True NCI_RA007_Epitope_Rep3 1165.68593003505 1165.68427490379 57.67 3 0.24494282814221044 0.00039635354736424893 0.0003397780596848759 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 87988 13742 QRNEVVVEL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 57.88 2 0.24494201009133892 0.00039635354736424893 0.00033978444014075044 ['ENSG00000186432|ENST00000334256|KPNA4'] 109469 11481 TDLLLEPYNK True NCI_RA007_Epitope_Rep2 1204.6339540318397 1204.6328499358601 49.251 2 0.24491616087766427 0.00039635354736424893 0.00033998611512524047 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 22371 14809 ETEEDKFLLL True H1975_Epitope_Rep3 1235.6285342982299 1235.6274299358602 62.343 2 0.24491553327984675 0.00039635354736424893 0.0003399910131215497 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 10125 8246 AYVHMVTHF True NCI_RA007_Epitope_Rep3 1103.52223583823 1103.52112993586 39.569 2 0.244867656588385 0.00039635354736424893 0.000340364868490585 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 6812 12334 AQEYEALLNIK True H1975_Epitope_Rep1 1290.6819668534197 1290.68086993586 52.472 2 0.24486640136388016 0.00039635354736424893 0.00034037467572275315 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 139162 6594 YLDYHM[Oxidation]EKY True H1975_Epitope_Rep3 1276.5434251557201 1276.5417749037902 30.317 3 0.24485674677253078 0.00039635354736424893 0.0003404501177717929 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 8704 16396 AVAQALEVIPR True PC9_epitope_Rep2 1165.68190728377 1165.68080993586 68.312 2 0.24485053004791066 0.00039635354736424893 0.0003404987048226928 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 108695 9612 SYRDSYESY True PC9_epitope_Rep3 1168.4672826295598 1168.46618993586 41.923 2 0.24484362291128872 0.00039635354736424893 0.00034055269596966047 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 18908 8700 ELEDSTLRY True H1975_Epitope_Rep3 1124.5349682665599 1124.5338699358601 38.463 2 0.24483250141073612 0.00039635354736424893 0.0003406396476560465 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 82945 4410 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 22.085 3 0.2448279857946327 0.00039635354736424893 0.00034067495863790637 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 71882 11492 M[Oxidation]ENFVAFVDK True H1975_Epitope_Rep3 1214.5641606002998 1214.56306993586 49.326 2 0.2448221507933017 0.00039635354736424893 0.00034072059231620095 ['CON__P02769'] 1334 7260 AEDVLSGKVSA True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 32.898 2 0.24480670976431212 0.00039635354736424893 0.00034084138123749506 ['ENSG00000175390|ENST00000651655|EIF3F'] 42682 14681 IEILSDVQLIK True H1975_Epitope_Rep1 1269.75440351769 1269.7533099358602 61.686 2 0.2447894633289526 0.00039635354736424893 0.000340976343886678 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0'] 21903 16443 ESDLPDELLY True H1975_Epitope_Rep3 1192.54994962436 1192.54884993586 68.731 2 0.24478725733479434 0.00039635354736424893 0.0003409936108447893 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 45921 15705 ISEENFRVM True PC9_epitope_Rep1 1123.53319444475 1123.53208993586 65.232 2 0.24478254720992346 0.00039635354736424893 0.0003410304812973198 ['ENSG00000138160|ENST00000260731|KIF11', 'KIF11|p.Y399C|1|0.26|ENSG00000138160|chr10:92621452-92621452|A/G|missense_variant'] 109989 11557 TEIIILATR True NCI_RA007_Epitope_Rep1 1028.62299542532 1028.62188993586 48.923 2 0.24477148593039716 0.00039635354736424893 0.0003411170837610012 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 15390 5270 EAIEGTYIDKK True NCI_RA007_Epitope_Rep5 1265.6503323719696 1265.6486849037901 26.967 3 0.24474846052760182 0.00039635354736424893 0.0003412974280935142 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF'] 89464 20601 QYFDSRGMFI True PC9_epitope_Rep3 1262.5753936098997 1262.5742899358602 84.51 2 0.24473993051934004 0.00039635354736424893 0.0003413642628602655 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 22412 4754 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56272993586 23.412 2 0.24473807019487712 0.00039635354736424893 0.00034137884071493857 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 133777 14254 VYERELQTF True PC9_epitope_Rep5 1183.5873381925899 1183.58624993586 59.832 2 0.24468896366594084 0.00039635354736424893 0.0003417638745844089 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 95908 17398 RYLDWIKKI True PC9_epitope_Rep4 1233.7233781729299 1233.7217249037901 74.916 3 0.24466871928596412 0.00039635354736424893 0.0003419227332110166 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 54675 18687 KYLSVQGQLF True PC9_epitope_Rep2 1181.64445914589 1181.6433699358602 77.247 2 0.24465384023371878 0.00039635354736424893 0.0003420395370597168 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 39084 5128 HHTFYNELR True NCI_RA007_Epitope_Rep1 1215.57850484439 1215.57685490379 24.029 3 0.244620677174793 0.00039635354736424893 0.0003423000183965316 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 97620 6576 SEFEQNLSEK True NCI_RA007_Epitope_Rep2 1209.5513466066898 1209.5502499358602 30.193 2 0.24460938549907613 0.00039635354736424893 0.0003423887549635846 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 58485 7239 LEQDEYALR True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 32.818 2 0.24458927533090336 0.00039635354736424893 0.00034254684951136305 ['ENSG00000138029|ENST00000317799|HADHB', 'nc|ENSG00000138029|P55084-2|HADHB'] 46661 9340 ITDPDPDIRY True H1975_Epitope_Rep3 1203.57716743171 1203.57606993586 40.926 2 0.24455938176510095 0.00039635354736424893 0.0003427819907819042 ['ENSG00000198793|ENST00000361445|MTOR'] 21438 15039 ERISLQQEL True PC9_epitope_Rep1 1114.59823722946 1114.5971499358602 62.666 2 0.24455784733835673 0.00039635354736424893 0.00034279406487116324 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 60899 12149 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 54.549 2 0.24455595376951908 0.00039635354736424893 0.0003428089655637643 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 12392 7753 DISTNYYASQK True NCI_RA007_Epitope_Rep1 1288.59354577184 1288.59244993586 34.149 2 0.2445161478051112 0.00039635354736424893 0.00034312235327231045 ['ENSG00000166598|ENST00000299767|HSP90B1'] 140817 4550 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 22.61 2 0.24450430901428052 0.00039635354736424893 0.0003432156141052226 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 2182 11445 AELWGEQAEA True H1975_Epitope_Rep1 1102.49310345458 1102.4925749679298 49.003 1 0.24448883485783388 0.00039635354736424893 0.00034333755108992937 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 108230 21904 SYIDLLQRF True PC9_epitope_Rep1 1153.6131590176099 1153.61206993586 89.068 2 0.24447349442256036 0.00039635354736424893 0.00034345847722672704 ['ENSG00000127580|ENST00000293883|WDR24'] 55815 6804 LAPEYEAAATR True NCI_RA007_Epitope_Rep1 1190.59315184902 1190.5920499358601 30.474 2 0.2444678762469822 0.00039635354736424893 0.0003435027750681892 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 89003 10048 QVISQAAVVHA True PC9_epitope_Rep2 1121.61930702721 1121.61820993586 43.975 2 0.24446604145089687 0.00039635354736424893 0.0003435172431953004 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 14963 13219 DYFEQYGK True PC9_epitope_Rep1 1048.4501760134401 1048.44906993586 55.71 2 0.24446062736885366 0.00039635354736424893 0.0003435599390368029 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 14974 22937 DYFFKPVLF True PC9_epitope_Rep1 1174.60628273202 1174.6051899358602 93.028 2 0.2444378888248065 0.00039635354736424893 0.0003437393149502191 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 68026 9257 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60664993586 40.563 2 0.2444250558628337 0.00039635354736424893 0.00034384059086692775 ['ENSG00000167658|ENST00000309311|EEF2'] 134015 10321 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5287299358602 44.645 2 0.24442148034659492 0.00039635354736424893 0.00034386881366366574 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 78318 16949 NYIRITSEI True PC9_epitope_Rep5 1107.59242357303 1107.5913299358601 70.212 2 0.24441800737237887 0.00039635354736424893 0.00034389622928447514 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 7876 9886 [Acetylation]-ATAEVLNIGKK True H1975_Epitope_Rep1 1184.6764878664596 1184.67538993586 42.96 2 0.24441302522258493 0.00039635354736424893 0.0003439355621484603 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 2556 11270 AEQQERFFMP True H1975_Epitope_Rep1 1281.5812072663298 1281.58010993586 48.327 2 0.24441261394123462 0.00039635354736424893 0.00034393880931651275 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 120653 7700 VEILANDQGNR True PC9_epitope_Rep1 1227.6207635791898 1227.6196699358602 34.439 2 0.24440161536915098 0.00039635354736424893 0.0003440256571698857 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 76554 3863 NQKDPGVLDR True NCI_RA007_Epitope_Rep2 1140.58873517492 1140.5870849037901 19.661 3 0.2443896888002888 0.00039635354736424893 0.00034411985760235295 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 15040 12602 DYMKTTSNF True PC9_epitope_Rep5 1105.47501086229 1105.47390993586 53.474 2 0.24437925526308651 0.00039635354736424893 0.0003442022867320106 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 23642 22079 EWSPYTKIFQF True PC9_epitope_Rep5 1444.7027022979998 1444.70160993586 89.957 2 0.2443748276179458 0.00039635354736424893 0.0003442372728886437 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 140812 4104 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 20.877 2 0.24435733982131705 0.00039635354736424893 0.0003443754919925776 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 137535 5888 YEEIDNAPEER True H1975_Epitope_Rep3 1363.5891886673896 1363.5880899358601 27.657 2 0.244356458761368 0.00039635354736424893 0.0003443824571390628 ['ENSG00000178952|ENST00000313511|TUFM'] 129490 25132 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 109.46 2 0.24434330128695939 0.00039635354736424893 0.00034448648927223755 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 54930 21942 KYPSPFFVF True PC9_epitope_Rep1 1130.5800679841798 1130.5789699358602 89.218 2 0.2443124511565052 0.00039635354736424893 0.0003447305354215773 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 108531 15553 SYMPTVSHL True PC9_epitope_Rep1 1033.49026700361 1033.4891699358602 64.648 2 0.24430577928472716 0.00039635354736424893 0.00034478333740009 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 49994 22087 KIWEELSVLEV True PC9_epitope_Rep1 1343.73366807311 1343.73256993586 89.769 2 0.24430101450222885 0.00039635354736424893 0.0003448210514136681 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 88264 11396 QSDYYASYY True H1975_Epitope_Rep2 1158.4505699362599 1158.4494699358602 48.884 2 0.2442917387467482 0.00039635354736424893 0.00034489448236388266 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 96411 8317 [Acetylation]-SAAEAGGVFHR True NCI_RA007_Epitope_Rep2 1142.5468706792399 1142.54576993586 36.991 2 0.2442895056798495 0.00039635354736424893 0.0003449121626430522 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 73800 17161 NAIDRLVNI True PC9_epitope_Rep6 1026.5821932425 1026.58108993586 78.594 2 0.2442579770123308 0.00039635354736424893 0.0003451618875003971 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 71066 10135 LYLDEAHSI True NCI_RA007_Epitope_Rep3 1059.52367530687 1059.52256993586 46.955 2 0.24423261538272253 0.00039635354736424893 0.0003453628975101878 ['ENSG00000100596|ENST00000216484|SPTLC2'] 137550 8283 YEELQSLAGK True H1975_Epitope_Rep3 1136.5713537752797 1136.5702499358601 36.844 2 0.24423236264324608 0.00039635354736424893 0.0003453649012514541 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 62001 9593 LLDPSQKNLY True H1975_Epitope_Rep3 1189.63428838501 1189.6331899358602 41.913 2 0.2442100641408314 0.00039635354736424893 0.000345541731675558 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 67947 11528 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 49.402 2 0.2441873819196697 0.00039635354736424893 0.0003457216981950644 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 72671 4599 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 22.812 2 0.24418536143490233 0.00039635354736424893 0.00034573773379430964 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 137174 13699 YAYDGKDYL True PC9_epitope_Rep2 1106.4920408254197 1106.49094993586 57.984 2 0.24416632772122157 0.00039635354736424893 0.0003458888316818577 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 94884 5870 RTDDITSGY True H1975_Epitope_Rep2 1026.4618033263 1026.4607099358602 27.565 2 0.2441376986103461 0.00039635354736424893 0.00034611622671705636 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 34104 11385 GM[Oxidation]DVAASEFFR True NCI_RA007_Epitope_Rep2 1244.54957316532 1244.54846993586 48.873 2 0.24413190438227705 0.00039635354736424893 0.0003461622672952192 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 7173 5223 AQYEEIAQR True NCI_RA007_Epitope_Rep3 1106.5356369728997 1106.53452993586 27.546 2 0.2441261291418581 0.00039635354736424893 0.00034620816310998025 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 108525 15103 SYMLVNENRF True PC9_epitope_Rep6 1271.5968573304701 1271.59576993586 70.152 2 0.24411933943010922 0.00039635354736424893 0.0003462621287288437 ['ENSG00000182195|ENST00000370526|LDOC1'] 45480 10415 IQLVEEELDR True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 45.013 2 0.24407678341178735 0.00039635354736424893 0.0003466005623458505 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 25672 7959 FEQEYTRVC True H1975_Epitope_Rep1 1173.5124590001699 1173.51136993586 35.563 2 0.24407532263846465 0.00039635354736424893 0.0003466121852685364 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 115074 14967 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61225490379 62.828 3 0.2440550476699632 0.00039635354736424893 0.00034677354730414225 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 24886 19564 FAYDGKDYLTL True PC9_epitope_Rep4 1304.6288686513997 1304.6277699358602 83.376 2 0.24404293369271454 0.00039635354736424893 0.000346869994550288 ['ENSG00000204592|ENST00000376630|HLA-E'] 41799 11404 IASPEGQDYLK True PC9_epitope_Rep1 1219.6084675599898 1219.60736993586 48.744 2 0.24403354573461733 0.00039635354736424893 0.00034694475668670707 ['ENSG00000100220|ENST00000216038|RTCB'] 89002 10691 QVISQAAVVHA True PC9_epitope_Rep1 1121.61930702721 1121.61820993586 46.014 2 0.2439885796779579 0.00039635354736424893 0.000347303073417498 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 48010 15365 IYLEKLKTI True PC9_epitope_Rep5 1119.69034670915 1119.68924993586 64.111 2 0.2439773947210652 0.00039635354736424893 0.0003473922595369297 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 23750 20958 EYGKFFVTL True PC9_epitope_Rep1 1102.5698972233 1102.5688099358601 85.438 2 0.2439747685378065 0.00039635354736424893 0.00034741320341108895 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 23164 16991 EVLDSFLDLAR True H1975_Epitope_Rep1 1276.66631678928 1276.66520993586 70.779 2 0.2439715766053377 0.00039635354736424893 0.0003474386608535067 ['ENSG00000105281|ENST00000542575|SLC1A5'] 36679 13618 GVIPYFPYSK True NCI_RA007_Epitope_Rep5 1169.6120963884498 1169.61098993586 59.067 2 0.24396317621851682 0.00039635354736424893 0.0003475056675656958 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'nc|ENSG00000141127|O60256-4|PRPSAP2', 'nc|ENSG00000141127|O60256-3|PRPSAP2', 'nc|ENSG00000141127|O60256-2|PRPSAP2', 'ENSG00000141127|ENST00000268835|PRPSAP2'] 88639 11483 QTELENQLEY True H1975_Epitope_Rep2 1265.5775613545297 1265.5764699358601 49.225 2 0.24396240348094886 0.00039635354736424893 0.00034751183205218225 ['ENSG00000135090|ENST00000392533|TAOK3'] 92509 19466 RLYDGLFKVI True PC9_epitope_Rep4 1222.70739375562 1222.70575490379 82.993 3 0.2439461865386349 0.00039635354736424893 0.0003476412274353407 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 83309 4867 PTDSLNNDNKY True H1975_Epitope_Rep2 1279.5680592999902 1279.56696993586 23.808 2 0.24393992931133593 0.00039635354736424893 0.0003476911669230278 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 46195 21963 ISMPDFDLHL True PC9_epitope_Rep1 1186.5692456003 1186.5681499358602 89.299 2 0.24388794964983163 0.00039635354736424893 0.0003481062994286151 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 138820 19810 YIYDKDMEII True PC9_epitope_Rep2 1301.6213407428097 1301.62024993586 81.588 2 0.24386262880687837 0.00039635354736424893 0.00034830870284903274 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 14333 4501 DSYVGDEAQSK True NCI_RA007_Epitope_Rep2 1197.51496109797 1197.51437496793 22.139 1 0.24386078228477776 0.00039635354736424893 0.00034832346773161607 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 142433 13361 YYFEGIKQTF True NCI_RA007_Epitope_Rep5 1294.6233893481397 1294.6222899358602 58.08 2 0.24382091722812962 0.00039635354736424893 0.0003486423837985404 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 23741 13164 EYGFQNALIVR True NCI_RA007_Epitope_Rep2 1308.68263555976 1308.68152993586 55.838 2 0.24380854781582964 0.00039635354736424893 0.0003487413972455364 ['CON__P02769'] 8111 8682 ATEDPWKTNY True H1975_Epitope_Rep1 1223.54586730343 1223.5447699358601 38.327 2 0.2437887056093949 0.00039635354736424893 0.00034890028707643985 ['ENSG00000139684|ENST00000378720|ESD'] 95997 20591 RYLMDPDTFTF True PC9_epitope_Rep4 1404.6383877892797 1404.63728993586 87.355 2 0.24378543695052884 0.00039635354736424893 0.00034892646837976645 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 10160 7539 AYVHM[Oxidation]VTHF True PC9_epitope_Rep4 1119.5171508382302 1119.51604993586 36.367 2 0.24378225634244907 0.00039635354736424893 0.00034895194630516825 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 54780 20575 KYNDNFFGL True PC9_epitope_Rep3 1116.5240096600398 1116.52290993586 84.408 2 0.24376887382126552 0.00039635354736424893 0.00034905916601870945 ['ENSG00000012963|ENST00000013070|UBR7'] 48937 6811 KEEELQAALAR True NCI_RA007_Epitope_Rep1 1256.67246479888 1256.6713699358602 30.501 2 0.24375067780169848 0.00039635354736424893 0.00034920500410548315 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 56713 16172 LDLDGIIAEVK True H1975_Epitope_Rep3 1184.66525416012 1184.66414993586 67.663 2 0.24375033530572665 0.00039635354736424893 0.0003492077497398393 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 66259 10018 LSFETTDESLR True NCI_RA007_Epitope_Rep4 1296.61976051968 1296.61866993586 45.378 2 0.24371362841000813 0.00039635354736424893 0.0003495021377451165 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 142632 20692 YYNPHLLLNTL True PC9_epitope_Rep5 1359.7186867153098 1359.7175899358601 84.647 2 0.24369457201094122 0.00039635354736424893 0.00034965506751669616 ['ENSG00000205339|ENST00000379719|IPO7'] 9646 20327 AYDTVRWEF True PC9_epitope_Rep1 1185.5454733806098 1185.54436993586 83.018 2 0.2436937447220086 0.00039635354736424893 0.00034966170812416366 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 139024 6588 YLAEVATGDDK True H1975_Epitope_Rep3 1180.5611830144 1180.56008993586 30.294 2 0.24364419098102924 0.00039635354736424893 0.00035005970431719317 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 84273 22328 PYNPLWAQL True PC9_epitope_Rep5 1100.5654805492 1100.5643899358602 90.894 2 0.24358881575185404 0.00039635354736424893 0.00035050499391707914 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 95430 21566 RWFQPAIPSW True PC9_epitope_Rep5 1286.6560268890996 1286.65492993586 87.993 2 0.24358133052306633 0.00039635354736424893 0.00035056522855514383 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 46041 14011 ISGLIYEETR True PC9_epitope_Rep5 1179.6135529404298 1179.61244993586 58.911 2 0.24358001003276147 0.00039635354736424893 0.00035057585579449896 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 95425 16071 RWFQPAIPSW True NCI_RA007_Epitope_Rep5 1286.6560268890996 1286.65492993586 68.548 2 0.24356923565552133 0.00039635354736424893 0.0003506625795120087 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 24321 15437 EYVEKFYRI True PC9_epitope_Rep5 1245.6393737654498 1245.63826993586 64.387 2 0.24355359261140488 0.00039635354736424893 0.00035078852976417696 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 38150 14244 HDDYLVMLK True PC9_epitope_Rep4 1132.5586809166 1132.55758993586 62.695 2 0.2435489570805206 0.00039635354736424893 0.0003508258615375829 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 25467 14194 FEELNADLFR True NCI_RA007_Epitope_Rep1 1252.6088019131598 1252.6077099358602 59.247 2 0.24353394874506884 0.00039635354736424893 0.00035094675696430584 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 25674 8105 FEQEYTRVC True H1975_Epitope_Rep3 1173.5124590001699 1173.51136993586 36.152 2 0.24352408214940868 0.00039635354736424893 0.0003510262573113999 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 108535 15457 SYMPTVSHL True PC9_epitope_Rep5 1033.49026700361 1033.4891699358602 64.466 2 0.24352384124341592 0.00039635354736424893 0.00035102819864344954 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 138059 14670 YGEPGEVFINK True PC9_epitope_Rep3 1251.6135529404298 1251.61244993586 61.564 2 0.2435208995786859 0.00039635354736424893 0.00035105190480851545 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 78255 11111 NYIDKVRFL True NCI_RA007_Epitope_Rep3 1166.64479349906 1166.64313490379 50.806 3 0.2435202755392169 0.00039635354736424893 0.00035105693399817907 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 71071 14577 LYLDEAHSI True PC9_epitope_Rep4 1059.52367530687 1059.52256993586 63.989 2 0.24352010372291705 0.00039635354736424893 0.000351058318693728 ['ENSG00000100596|ENST00000216484|SPTLC2'] 136844 11421 YADNQVMHFY True H1975_Epitope_Rep1 1286.5390081011801 1286.5379099358602 48.911 2 0.24351345420240947 0.00039635354736424893 0.0003511119124706877 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 26573 4829 FIKVPQNQNGK True NCI_RA007_Epitope_Rep1 1271.6986199770697 1271.69698490379 22.864 3 0.2435074793535677 0.00039635354736424893 0.00035116007553017184 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 70047 11791 LVNELTEFAK True NCI_RA007_Epitope_Rep1 1162.6233893481399 1162.6222899358602 49.843 2 0.24350247887103202 0.00039635354736424893 0.0003512003893476746 ['CON__P02769'] 138353 10765 YHFEEVQKL True PC9_epitope_Rep6 1191.5924235730297 1191.5907749037901 52.235 3 0.2434951044808007 0.00039635354736424893 0.00035125985004376116 ['ENSG00000140848|ENST00000290776|CPNE2'] 135583 20169 WLAEKLPTL True PC9_epitope_Rep2 1069.61718176889 1069.6160899358601 82.993 2 0.24346443723406597 0.00039635354736424893 0.00035150723246841527 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 26745 5398 FKDLGEEHFK True NCI_RA007_Epitope_Rep5 1248.6138872935996 1248.61225490379 27.452 3 0.24344506894653187 0.00039635354736424893 0.0003516635599761091 ['CON__P02769'] 24241 7216 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56954993586 32.72 2 0.24342252381577728 0.00039635354736424893 0.00035184561659317923 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 134290 12560 VYNPTRNEW True PC9_epitope_Rep5 1177.55162139021 1177.5505299358601 53.311 2 0.24340387823295118 0.00039635354736424893 0.000351996254956308 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 67977 13820 LTDEQIRFLY True H1975_Epitope_Rep2 1296.67140216972 1296.6703099358601 58.307 2 0.24337950408824627 0.00039635354736424893 0.00035219327212442217 ['RBM12B|p.P862Lfs*25|1|0.11|ENSG00000183808|chr8:93733826-93733826|G/-|frameshift_variant', 'ENSG00000183808|ENST00000520560|RBM12B'] 63989 4737 LNVTEQEKIDK True H1975_Epitope_Rep3 1315.69834519355 1315.69669490379 23.346 3 0.24337374456753974 0.00039635354736424893 0.00035223984270662975 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 137218 19565 YAYFNFPEL True H1975_Epitope_Rep3 1162.5335117145798 1162.5324099358602 81.977 2 0.243348995376191 0.00039635354736424893 0.00035244003108386154 ['ENSG00000137628|ENST00000393743|DDX60'] 64914 10418 LQEEIDALESR True NCI_RA007_Epitope_Rep1 1301.6463096206899 1301.64520993586 44.507 2 0.24334680586025317 0.00039635354736424893 0.000352457746877823 ['ENSG00000101132|ENST00000371419|PFDN4', 'ENST00000487129.1_1_20:52825073-52835686:+|nuORF'] 103378 5219 SPPGQVTEAVK True NCI_RA007_Epitope_Rep2 1111.5873381925899 1111.58624993586 24.921 2 0.24332439243963883 0.00039635354736424893 0.00035263914953708586 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 90939 10048 REYQELMSV True NCI_RA007_Epitope_Rep4 1153.54375912845 1153.5426699358602 45.495 2 0.24329991935951312 0.00039635354736424893 0.0003528373289481182 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 1382 5580 AEEEAATRIPA True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 26.467 2 0.2432939522404115 0.00039635354736424893 0.0003528856667366458 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 68373 8942 LTEQRALLY True H1975_Epitope_Rep1 1105.6131590176099 1105.61206993586 39.299 2 0.24328879345687524 0.00039635354736424893 0.0003529274618008119 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2', 'TECPR2|p.N1004Efs*17|1|0.25|ENSG00000196663|chr14:102445878-102445879|-/G|frameshift_variant'] 17018 6595 EGDLIAAQAR True NCI_RA007_Epitope_Rep1 1042.54072235334 1042.5396299358601 29.667 2 0.24328343699435923 0.00039635354736424893 0.000352970863659509 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 68211 13532 LTDYDIRFY True H1975_Epitope_Rep2 1204.57643915572 1204.57534993586 57.187 2 0.2432736566099684 0.00039635354736424893 0.00035305012508061437 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 112434 8704 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.5120699358602 38.441 2 0.24327312263105738 0.00039635354736424893 0.0003530544530242723 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 26747 6485 FKDLGEEHFK True PC9_epitope_Rep4 1248.6138872935996 1248.61225490379 32.063 3 0.24326979847796795 0.00039635354736424893 0.0003530813967591919 ['CON__P02769'] 103158 11690 SPIENIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 49.962 2 0.24326364547427262 0.00039635354736424893 0.000353131275023793 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 62320 11299 LLGELLQDNAK True H1975_Epitope_Rep1 1212.67140216972 1212.6703099358601 48.439 2 0.24322381624144299 0.00039635354736424893 0.0003534543147909233 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 78261 11624 NYIDKVRFL True NCI_RA007_Epitope_Rep5 1166.64479349906 1166.64313490379 51.363 3 0.24321983654468285 0.00039635354736424893 0.00035348660887880195 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 76340 6842 NPTNTVFDAK True NCI_RA007_Epitope_Rep2 1105.5403880001697 1105.53928993586 31.23 2 0.2432172698543181 0.00039635354736424893 0.00035350743839813054 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000443628.2_1_X:114011085-114011187:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 16574 8421 EELYQNLTR True H1975_Epitope_Rep1 1164.57750178488 1164.57640993586 37.319 2 0.24320611266208783 0.00039635354736424893 0.00035359799691330525 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 89745 3679 RAFDSAVAK True NCI_RA007_Epitope_Rep4 963.5137793295098 963.51268993586 20.261 2 0.24319668936901198 0.00039635354736424893 0.0003536745001767412 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 68227 7257 LTEAGDYTAKY True H1975_Epitope_Rep2 1230.57683307854 1230.5757299358602 32.848 2 0.24317534916548483 0.00039635354736424893 0.00035384781256895674 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 54214 6764 KVVNPLFEK True NCI_RA007_Epitope_Rep5 1072.6280808057597 1072.6269899358601 32.693 2 0.24317382468374038 0.00039635354736424893 0.0003538601967584602 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 70848 21390 LYDIILKNF True PC9_epitope_Rep5 1137.64339651673 1137.6422899358602 87.338 2 0.2431729033468506 0.00039635354736424893 0.0003538676814869089 ['ENSG00000092010|ENST00000206451|PSME1'] 49875 20525 KIFDEILVNA True PC9_epitope_Rep5 1160.64412479272 1160.64302993586 83.991 2 0.2431534272748287 0.00039635354736424893 0.00035402593776030176 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 109467 11044 TDLLLEPYNK True H1975_Epitope_Rep3 1204.6339540318397 1204.6328499358601 47.57 2 0.24314556818960897 0.00039635354736424893 0.00035408981824645185 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 17585 20807 EHIGIGLLSL True PC9_epitope_Rep4 1050.60734536118 1050.6062499358602 88.184 2 0.24313124205663442 0.00039635354736424893 0.00035420629415398565 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 10079 15444 AYTLLLHTW True NCI_RA007_Epitope_Rep1 1116.59678067748 1116.59568993586 64.155 2 0.24312894024487064 0.00039635354736424893 0.0003542250121803855 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 47914 8498 IYIKQIKTF True NCI_RA007_Epitope_Rep3 1152.6906810623198 1152.68958993586 40.5 2 0.24312388848404254 0.00039635354736424893 0.0003542660959035085 ['ENSG00000103479|ENST00000262133|RBL2'] 90233 10248 REEDPYMDTTL True H1975_Epitope_Rep1 1368.5867461392397 1368.5856499358601 44.363 2 0.2430933527240335 0.00039635354736424893 0.0003545145314102921 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 14283 15865 DSTLIM[Oxidation]QLLR True H1975_Epitope_Rep3 1204.6485589305998 1204.64746993586 66.473 2 0.24304071591067877 0.00039635354736424893 0.00035494318882538033 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 54384 10363 KYFDEHYEY True PC9_epitope_Rep6 1292.53496826656 1292.53333490379 50.582 3 0.24303359827804846 0.00039635354736424893 0.00035500119243531147 ['ENSG00000123975|ENST00000314355|CKS2'] 72232 11963 MHFESGSTL True PC9_epitope_Rep5 1007.43823143075 1007.43712993586 51.012 2 0.24299624128356756 0.00039635354736424893 0.000355305781100528 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 74325 8036 NELTEFAK True H1975_Epitope_Rep3 950.4709114580199 950.46980993586 35.883 2 0.242990736407758 0.00039635354736424893 0.0003553506870208704 ['CON__P02769'] 80181 20854 PFVDHVFTF True PC9_epitope_Rep2 1107.53893144819 1107.5378299358601 85.66 2 0.24298993911424088 0.00039635354736424893 0.00035535719139951114 ['ENSG00000113460|ENST00000336767|BRIX1'] 41974 6586 IDEPLEGSEDR True H1975_Epitope_Rep3 1258.56772494682 1258.5666299358602 30.287 2 0.24296529364025268 0.00039635354736424893 0.00035555830987091415 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 120208 13673 VEAQLQELQVK True PC9_epitope_Rep1 1283.7085159544297 1283.7074099358601 57.447 2 0.2429480191091507 0.00039635354736424893 0.00035569934607836227 ['ENSG00000100345|ENST00000216181|MYH9'] 53402 19071 KQVEEIFNLKF True PC9_epitope_Rep4 1393.7605515272896 1393.7594499358602 81.447 2 0.24293989576526354 0.00039635354736424893 0.00035576568771207616 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 78682 20391 NYYKVNWTF True PC9_epitope_Rep1 1233.5818588893296 1233.5807699358602 83.256 2 0.2429345468973816 0.00039635354736424893 0.0003558093775613177 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 75761 15924 NLLPKLHIV True PC9_epitope_Rep6 1045.66480066765 1045.6637099358602 73.539 2 0.24293320433238502 0.00039635354736424893 0.0003558203445513256 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 94971 16896 RTLNETELTEL True PC9_epitope_Rep5 1317.6776097489699 1317.6765099358602 70.002 2 0.24290762810245628 0.00039635354736424893 0.0003560293334599164 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF'] 66030 10775 LSEERVWEY True H1975_Epitope_Rep2 1209.56660274801 1209.56550993586 46.476 2 0.2429045369211603 0.00039635354736424893 0.00035605460050758 ['ENSG00000104142|ENST00000220509|VPS18', 'VPS18|p.D357Gfs*27|1|0.25|ENSG00000104142|chr15:40899884-40899885|-/G|frameshift_variant'] 34933 4774 GQNPTNAEVLK True NCI_RA007_Epitope_Rep3 1169.6040508858898 1169.6029499358601 25.741 2 0.2428809841941593 0.00039635354736424893 0.0003562471775127798 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 68084 12781 LTDLYSPEY True H1975_Epitope_Rep2 1099.50735653639 1099.50624993586 54.266 2 0.2428786119849189 0.00039635354736424893 0.0003562665794826872 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 45686 14543 IRKPYIWEY True PC9_epitope_Rep4 1266.67609362734 1266.6749899358601 63.853 2 0.24287704860467607 0.00039635354736424893 0.0003562793667318646 ['ENSG00000136628|ENST00000366923|EPRS1'] 72656 4496 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 22.406 2 0.242870845122756 0.00039635354736424893 0.0003563301109843658 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 35910 8566 GTQSFVFQR True NCI_RA007_Epitope_Rep4 1068.5352430500798 1068.5341499358601 39.733 2 0.242869627284789 0.00039635354736424893 0.00035634007370493584 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1'] 27668 9946 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 43.194 2 0.24286412140267669 0.00039635354736424893 0.00035638511895096054 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 108231 21577 SYIDLLQRF True PC9_epitope_Rep2 1153.6131590176099 1153.61206993586 88.469 2 0.24284325251223213 0.00039635354736424893 0.00035655590534753337 ['ENSG00000127580|ENST00000293883|WDR24'] 14398 10428 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.55018993586 45.065 2 0.24283994968260536 0.00039635354736424893 0.00035658294249859803 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 73244 4502 MSEDKPQDY True H1975_Epitope_Rep2 1111.44919003727 1111.44808993586 22.428 2 0.24282440944394076 0.00039635354736424893 0.0003567101833734353 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 11040 11634 DASVNFSEFSK True NCI_RA007_Epitope_Rep1 1229.5564319871298 1229.55532993586 49.225 2 0.24280653390061308 0.00039635354736424893 0.0003568566016439547 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000559968.1_1_14:68082236-68082464:+|nuORF'] 95948 8248 RYLENGKETL True PC9_epitope_Rep1 1221.6353510141698 1221.6337049037902 36.56 3 0.24279800682092398 0.00039635354736424893 0.0003569264680395108 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 102742 21424 SMVEDITGLRL True PC9_epitope_Rep1 1232.6434731697198 1232.6423699358602 87.245 2 0.24278051739530976 0.00039635354736424893 0.00035706981009664716 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 142277 8937 YYAEVETRI True NCI_RA007_Epitope_Rep3 1142.5607890915799 1142.5596899358602 42.239 2 0.24277954107867608 0.00039635354736424893 0.00035707781361766496 ['ENSG00000112685|ENST00000230449|EXOC2'] 127306 11303 VMEKSFLEY True H1975_Epitope_Rep1 1144.5474475265598 1144.54634993586 48.455 2 0.2427559160827065 0.00039635354736424893 0.00035727153838236705 ['ENST00000513342.5_1_17:46990150-47004493:+|nuORF', 'nc|ENSG00000159202|Q9H832-2|UBE2Z', 'ENSG00000159202|ENST00000360943|UBE2Z'] 68945 9186 LTPEEEEILNK True H1975_Epitope_Rep3 1313.6714617393698 1313.6703699358602 40.324 2 0.24274825372938405 0.00039635354736424893 0.0003573343922471893 ['ENSG00000142937|ENST00000396651|RPS8'] 558 9711 [Acetylation]-AAQGEPQVQFK True H1975_Epitope_Rep3 1243.6197012663295 1243.6186099358601 42.373 2 0.24274224812766756 0.00039635354736424893 0.0003573836636210334 ['ENSG00000132341|ENST00000543796|RAN'] 29765 12200 FVNVVPTFGK True NCI_RA007_Epitope_Rep5 1106.6124307416198 1106.61132993586 53.58 2 0.24272985912309092 0.00039635354736424893 0.0003574853274639806 ['ENSG00000149806|ENST00000529639|FAU'] 131145 5666 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 26.791 2 0.24272201105595198 0.00039635354736424893 0.00035754974349937337 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 62853 19142 LLMEHIQEI True PC9_epitope_Rep5 1124.58998104488 1124.5888899358602 78.664 2 0.2427127707946839 0.00039635354736424893 0.00035762560142554693 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 117603 11440 TVTDFPGFDER True H1975_Epitope_Rep1 1282.5829810881398 1282.58188993586 48.983 2 0.24270694656310482 0.00039635354736424893 0.00035767342374796405 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 12890 13362 DLINNLGTIAK True NCI_RA007_Epitope_Rep2 1170.66083748602 1170.6597499358602 56.615 2 0.24269799928198255 0.00039635354736424893 0.00035774690168615585 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 49516 8129 KFIDTTSKF True NCI_RA007_Epitope_Rep2 1085.57571087973 1085.57460993586 36.253 2 0.24268235666658625 0.00039635354736424893 0.0003578754002233402 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 82956 5982 PSEKPSSTLQY True H1975_Epitope_Rep2 1235.60338217955 1235.6022899358602 27.989 2 0.24266166023159075 0.00039635354736424893 0.00035804548523253555 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L'] 66111 14844 LSELEAALQR True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 62.362 2 0.24266012088323807 0.00039635354736424893 0.0003580581389626856 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 4822 9308 ALEEQLQQIR True H1975_Epitope_Rep2 1226.6619001151798 1226.66080993586 40.762 2 0.24265573127688847 0.00039635354736424893 0.00035809422480728774 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 139282 18246 YLKDLIEEV True PC9_epitope_Rep6 1120.6015912743999 1120.6004899358602 82.823 2 0.2426258691275528 0.00039635354736424893 0.0003583398108107996 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.Y333_K335dup|1|0.36|ENSG00000128272|chr22:39522540-39522541|-/AGTACCTGA|inframe_insertion'] 116299 10728 TTDPYLTNSY True H1975_Epitope_Rep2 1173.5189838492502 1173.51847496793 46.292 1 0.24261034749896848 0.00039635354736424893 0.0003584675272276455 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 62048 8272 LLDSSQKNLY True H1975_Epitope_Rep1 1179.61355294043 1179.61244993586 36.752 2 0.24260800682654318 0.00039635354736424893 0.00035848679091308436 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 133936 10750 VYIKHPVSL True PC9_epitope_Rep1 1054.61751612206 1054.61640993586 46.238 2 0.24255215662260918 0.00039635354736424893 0.0003589467449749913 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 34810 12250 GQIDADELQRC True PC9_epitope_Rep5 1246.5612000977399 1246.56010993586 52.107 2 0.24254414905938457 0.00039635354736424893 0.0003590127397117847 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000489079.1_1_7:87840172-87856229:-|nuORF', 'ENST00000488015.5_1_7:87840172-87849341:-|nuORF'] 139502 5066 YLSEVASGDNK True H1975_Epitope_Rep3 1181.5564319871298 1181.55532993586 24.608 2 0.242535906120232 0.00039635354736424893 0.00035908068702114664 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion'] 95974 12160 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64422490379 52.085 3 0.24252934662530437 0.00039635354736424893 0.0003591347667587348 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 26524 12768 FIGNLNTLVVK True H1975_Epitope_Rep1 1216.71795843932 1216.7168699358601 54.173 2 0.24251692055463522 0.00039635354736424893 0.00035923723585704287 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 72660 4870 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 23.819 2 0.24251489565166556 0.00039635354736424893 0.00035925393659107376 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 69561 9133 LVDEPQNLIK True H1975_Epitope_Rep1 1167.6499384491499 1167.6488499358602 40.036 2 0.24251040573500066 0.00039635354736424893 0.0003592909707251134 ['CON__P02769'] 87684 18466 QQVQRLPFL True PC9_epitope_Rep4 1127.64512785223 1127.64402993586 79.099 2 0.24250511941609382 0.00039635354736424893 0.00035933457872319106 ['ENSG00000132963|ENST00000380842|POMP'] 42258 12114 IDTIEIITDR True H1975_Epitope_Rep3 1187.63976768827 1187.6386699358602 51.761 2 0.24249486305216353 0.00039635354736424893 0.0003594192008469712 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 130174 11849 VSEEIEDIIK True NCI_RA007_Epitope_Rep1 1173.6128842340897 1173.61178993586 50.072 2 0.2424732753551385 0.00039635354736424893 0.00035959737964395025 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 118700 19741 TYTDVTPRQFF True PC9_epitope_Rep1 1373.6615657620098 1373.6604699358602 80.761 2 0.24246804401724287 0.00039635354736424893 0.00035964057097219736 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 139948 8090 YQAVTATLEEK True NCI_RA007_Epitope_Rep1 1251.63468230783 1251.63358993586 35.466 2 0.24244424447146884 0.00039635354736424893 0.00035983713208563085 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 95035 3060 RTSEIYVHR True NCI_RA007_Epitope_Rep3 1159.6098049726697 1159.60816490379 17.123 3 0.2424395681334771 0.00039635354736424893 0.0003598757667541852 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 2553 9839 AEQQALRLEV True H1975_Epitope_Rep2 1155.6247863304698 1155.62368993586 42.832 2 0.24241956774787016 0.00039635354736424893 0.00036004105160263603 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 108235 19712 SYIDLLQRF True PC9_epitope_Rep6 1153.6131590176099 1153.61206993586 88.479 2 0.24241662776855122 0.00039635354736424893 0.00036006535425302797 ['ENSG00000127580|ENST00000293883|WDR24'] 140830 4620 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 22.893 2 0.24241661801437897 0.00039635354736424893 0.00036006543488634646 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 7917 6302 ATANQIILK True NCI_RA007_Epitope_Rep3 970.58113061334 970.58002993586 31.79 2 0.24240145428188767 0.00039635354736424893 0.00036019080848429967 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 7904 9127 ATALEYVYK True NCI_RA007_Epitope_Rep3 1056.54916177872 1056.5480699358602 42.988 2 0.2423944007295803 0.00039635354736424893 0.0003602491421062183 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 115093 13571 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61225490379 63.938 3 0.24238652697793692 0.00039635354736424893 0.0003603142700540912 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 62241 20518 LLFEGEKITI True PC9_epitope_Rep2 1161.6645258841297 1161.6634299358602 84.353 2 0.24236740566382234 0.00039635354736424893 0.00036047248167723903 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 22334 2766 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 14.668 2 0.24236529763546344 0.00039635354736424893 0.00036048992797316166 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 74875 7213 NHHLQETSF True PC9_epitope_Rep1 1111.50467119779 1111.50356993586 32.559 2 0.24236294382711326 0.00039635354736424893 0.00036050940937445357 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 57776 7607 LEEQSRLIAA True H1975_Epitope_Rep2 1128.6138872935999 1128.61278993586 34.213 2 0.24236131569474867 0.00039635354736424893 0.0003605228853033501 ['ENSG00000157500|ENST00000288266|APPL1'] 137557 12204 YEELQSLAGK True PC9_epitope_Rep5 1136.5713537752797 1136.5702499358601 51.928 2 0.24235749446105617 0.00039635354736424893 0.0003605545153508923 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 90407 12414 REIEELLAEA True H1975_Epitope_Rep3 1171.6084675599898 1171.60736993586 52.94 2 0.2423570786503634 0.00039635354736424893 0.00036055795736846436 ['nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10', 'ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF'] 9404 8306 AVTEAEIQQLK True NCI_RA007_Epitope_Rep4 1228.66631678928 1228.66520993586 38.761 2 0.2423529532489895 0.00039635354736424893 0.0003605921085979445 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 106785 19913 SVADYFKQI True PC9_epitope_Rep2 1069.54441075145 1069.5433099358602 81.991 2 0.2423141226221275 0.00039635354736424893 0.0003609137184285683 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 2877 12018 AEVIVDWRP True NCI_RA007_Epitope_Rep3 1083.57129420563 1083.57018993586 54.399 2 0.24230636682145978 0.00039635354736424893 0.0003609779893393845 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15', 'ENST00000546932.5_1_12:72265915-72278641:+|nuORF'] 142716 18341 YYQEYPMSI True PC9_epitope_Rep6 1192.5110620178398 1192.50996993586 83.192 2 0.24228736871003198 0.00039635354736424893 0.00036113547173401026 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 45388 7022 IQEENVIPR True H1975_Epitope_Rep1 1096.58767254576 1096.58656993586 32.045 2 0.24228602074270528 0.00039635354736424893 0.00036114664815275577 ['ENSG00000138095|ENST00000260665|LRPPRC'] 111631 15986 TIDQLYLEY True H1975_Epitope_Rep2 1156.5652057656798 1156.5641099358602 66.688 2 0.24228199977741013 0.00039635354736424893 0.00036117998929446215 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 53808 9189 KTDSDSDLQLY True H1975_Epitope_Rep2 1283.58812603823 1283.58702993586 40.298 2 0.24227714491750332 0.00039635354736424893 0.000361220249058138 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 48291 12280 IYQRDPLKL True PC9_epitope_Rep5 1144.6604435631998 1144.65934993586 52.223 2 0.2422660372983149 0.00039635354736424893 0.000361312377835832 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 54477 9191 KYGRIVEVL True NCI_RA007_Epitope_Rep4 1075.6389798426299 1075.6378899358601 42.197 2 0.2422394850509777 0.00039635354736424893 0.00036153270289998075 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX'] 70061 9104 LVNEVTEFAK True NCI_RA007_Epitope_Rep3 1148.607739284 1148.60664993586 42.895 2 0.24222490889064557 0.00039635354736424893 0.00036165371014734493 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB'] 4824 9247 ALEEQLQQIR True NCI_RA007_Epitope_Rep5 1226.6619001151798 1226.66080993586 42.219 2 0.24222363569960323 0.00039635354736424893 0.00036166428175555605 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 9330 6456 AVQTAAKELLK True NCI_RA007_Epitope_Rep4 1170.6972229947398 1170.69556490379 31.432 3 0.2422206120980259 0.00039635354736424893 0.0003616893886808981 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP', 'ENST00000460963.5_1_2:220250088-220252486:-|nuORF', 'ENST00000430206.5_1_2:220251659-220252065:-|nuORF', 'ENST00000523527.5_1_2:220250965-220252516:-|nuORF'] 24948 10948 FDAGELITQR True H1975_Epitope_Rep1 1148.5825871653199 1148.5814899358602 47.075 2 0.24221955422256947 0.00039635354736424893 0.0003616981733198211 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 54197 5144 KVVDVIGTK True NCI_RA007_Epitope_Rep4 957.58588164061 957.58478993586 26.31 2 0.24221350675054343 0.00039635354736424893 0.0003617483958706719 ['ENSG00000005249|ENST00000265717|PRKAR2B'] 56623 10408 LDIDSPPITAR True NCI_RA007_Epitope_Rep1 1196.6401020414398 1196.63900993586 44.469 2 0.2422067862465634 0.00039635354736424893 0.00036180421596653103 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 137143 16843 YAVEGRDLTL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 69.611 2 0.24218954533962464 0.00039635354736424893 0.000361947457395771 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 141827 17672 YVDDTQFVRF True PC9_epitope_Rep6 1288.60880191316 1288.6077099358602 80.613 2 0.24217882924996362 0.00039635354736424893 0.00036203651779798595 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 140747 11227 YSDDNPYYNY True H1975_Epitope_Rep2 1312.48841199696 1312.4873099358601 48.226 2 0.24217067373215106 0.00039635354736424893 0.0003621043122580996 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 95968 8396 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64474993586 38.97 2 0.2421660555517212 0.00039635354736424893 0.00036214270750168476 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 21054 8698 EQVANSAFVER True PC9_epitope_Rep2 1248.6098645423197 1248.6087699358602 38.82 2 0.24216604050039586 0.00039635354736424893 0.0003621428326440727 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 24240 7121 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56954993586 32.358 2 0.2421609434717467 0.00039635354736424893 0.0003621852137542852 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 106963 10212 SVEEISTLVQK True NCI_RA007_Epitope_Rep2 1231.6659824361097 1231.6648899358602 44.312 2 0.24215715617527725 0.00039635354736424893 0.00036221670783794576 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 134132 13334 VYLDKFIRL True NCI_RA007_Epitope_Rep5 1165.68593003505 1165.68427490379 57.975 3 0.24215550256898993 0.00039635354736424893 0.00036223045962034494 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 49378 6797 KESYSVYVYK True NCI_RA007_Epitope_Rep4 1264.6339540318397 1264.6328499358601 32.77 2 0.24214943143040824 0.00039635354736424893 0.00036228095314010355 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 57117 10357 LDTDDLDEIEK True H1975_Epitope_Rep3 1304.5983563687598 1304.5972499358602 44.893 2 0.24214843268415226 0.00039635354736424893 0.00036228926036581063 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'ENST00000569319.5_1_16:70399881-70405886:+|nuORF'] 106135 7979 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58082993586 35.661 2 0.24212359711504536 0.00039635354736424893 0.0003624958954842133 ['ENSG00000168090|ENST00000303904|COPS6'] 78360 12880 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.6069699358602 54.841 2 0.2421187846326892 0.00039635354736424893 0.00036253594962266364 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 84773 4673 QDVDNASLAR True PC9_epitope_Rep4 1087.52580056519 1087.52470993586 24.504 2 0.24211331573328423 0.00039635354736424893 0.00036258147248736705 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 139169 8374 YLDYHMEKY True H1975_Epitope_Rep3 1260.5485101557201 1260.54740993586 37.195 2 0.24209602352302137 0.00039635354736424893 0.0003627254497655932 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 62472 21122 LLIDELNKL True PC9_epitope_Rep3 1069.63831113629 1069.63720993586 86.529 2 0.24208814439043772 0.00039635354736424893 0.00036279107150061137 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 2845 8130 [Acetylation]-AEVEETLKR True H1975_Epitope_Rep1 1115.58225312845 1115.5811499358601 36.21 2 0.2420806638813596 0.00039635354736424893 0.0003628533842981453 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'nc|ENSG00000125971|Q9NP97-2|DYNLRB1', 'ENSG00000168589|ENST00000305904|DYNLRB2'] 59738 15002 LGDLYEEEMR True PC9_epitope_Rep3 1253.5598031154097 1253.5587099358602 62.832 2 0.2420763245239107 0.00039635354736424893 0.00036288953615572586 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 118248 12390 TYLEKAIKI True PC9_epitope_Rep4 1077.6433965167298 1077.6422899358602 55.464 2 0.2420437233314975 0.00039635354736424893 0.00036316125726649915 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 119909 5975 VDKLDASESLR True NCI_RA007_Epitope_Rep1 1231.64083031743 1231.63918490379 27.287 3 0.24203084024688867 0.00039635354736424893 0.0003632686901317896 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 54192 4339 KVVDSLYNK True NCI_RA007_Epitope_Rep5 1064.5866099165999 1064.58550993586 23.297 2 0.24202719471026088 0.00039635354736424893 0.00036329909627973015 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 139278 20524 YLKDLIEEV True PC9_epitope_Rep1 1120.6015912743999 1120.6004899358602 83.758 2 0.24202458855291922 0.00039635354736424893 0.00036332083489253335 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.Y333_K335dup|1|0.36|ENSG00000128272|chr22:39522540-39522541|-/AGTACCTGA|inframe_insertion'] 71369 20548 LYRLQFNEF True PC9_epitope_Rep5 1228.6240580544797 1228.62296993586 84.082 2 0.24202427380622385 0.00039635354736424893 0.0003633234603620382 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 76432 5730 NQELQEINR True NCI_RA007_Epitope_Rep2 1142.5679997303398 1142.5669099358602 26.904 2 0.24198087323125503 0.00039635354736424893 0.0003636856698888676 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 97546 10856 SEEQYNKIVIP True H1975_Epitope_Rep2 1318.6768814729799 1318.6757899358602 46.787 2 0.24197596485200074 0.00039635354736424893 0.00036372665668920766 ['ENSG00000039123|ENST00000230640|MTREX'] 46028 9087 ISGLIYEETR True NCI_RA007_Epitope_Rep3 1179.6135529404298 1179.61244993586 42.832 2 0.2419604495429824 0.00039635354736424893 0.000363856245782534 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 116301 10674 TTDPYLTNSY True H1975_Epitope_Rep3 1173.5189838492502 1173.51847496793 46.131 1 0.2419227164549279 0.00039635354736424893 0.0003641715985275074 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 53886 21664 KTLDWEIVEL True PC9_epitope_Rep1 1244.66525416012 1244.66414993586 88.159 2 0.24187251580912827 0.00039635354736424893 0.00036459157333319065 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1'] 71308 19391 LYQEVFGRL True PC9_epitope_Rep2 1123.6025943339098 1123.6014899358602 79.965 2 0.2418627692704149 0.00039635354736424893 0.00036467316842798877 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 67953 15173 LTDDHVQFLIY True H1975_Epitope_Rep2 1362.6819668534201 1362.68086993586 63.519 2 0.24185735083946405 0.00039635354736424893 0.0003647185378247746 ['nc|ENSG00000112062|Q16539-5|MAPK14', 'nc|ENSG00000112062|Q16539-3|MAPK14', 'nc|ENSG00000112062|Q16539-4|MAPK14', 'nc|ENSG00000112062|Q16539-2|MAPK14', 'ENSG00000112062|ENST00000229794|MAPK14'] 8149 5524 ATELTHEDY True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 26.256 2 0.24184874310725804 0.00039635354736424893 0.00036479062339508705 ['ENSG00000165916|ENST00000298852|PSMC3'] 26951 10587 FLDSTGSRLDY True H1975_Epitope_Rep3 1272.59863115228 1272.5975299358602 45.792 2 0.24184092837845647 0.00039635354736424893 0.00036485608032215354 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 18207 6485 EIM[Oxidation]DAAEDYAK True H1975_Epitope_Rep1 1270.5387336981 1270.5376299358602 30.006 2 0.24182119432165453 0.00039635354736424893 0.0003650214271320946 ['ENSG00000115866|ENST00000264161|DARS1'] 116268 11944 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.4974899358601 51.021 2 0.24181388291877312 0.00039635354736424893 0.00036508270665617284 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 114409 7527 TPTLVEVSR True NCI_RA007_Epitope_Rep4 1000.55530978832 1000.55420993586 35.597 2 0.24180483012072884 0.00039635354736424893 0.0003651585957417868 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 65787 12018 LSDIASALRY True H1975_Epitope_Rep2 1107.59242357303 1107.5913299358601 51.307 2 0.24180311653371694 0.00039635354736424893 0.0003651729624238265 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000518647.5_1_8:42129618-42174557:+|nuORF', 'ENST00000520201.5_1_8:42129679-42177019:+|nuORF', 'IKBKB|p.Q154Rfs*7|1|0.11|ENSG00000104365|chr8:42305259-42305259|A/-|frameshift_variant', 'nc|ENSG00000104365|O14920-3|IKBKB'] 86212 19557 QIIRELQVL True PC9_epitope_Rep5 1110.67609362734 1110.6749899358601 80.276 2 0.24179606222592173 0.00039635354736424893 0.00036523211158126826 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 138492 13926 YHSEVPVSL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 58.845 2 0.24179205410644775 0.00039635354736424893 0.0003652657232540675 ['ENSG00000115306|ENST00000356805|SPTBN1'] 78092 6573 NVYEVVNPK True NCI_RA007_Epitope_Rep3 1060.5553097883198 1060.5542099358602 32.906 2 0.2417869991149281 0.00039635354736424893 0.00036530811831023586 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant', 'CPNE8|p.K277Efs*5|1|0.39|ENSG00000139117|chr12:38724870-38724871|-/T|frameshift_variant'] 108518 17641 SYMLVNENRF True PC9_epitope_Rep3 1271.5968573304701 1271.59576993586 73.047 2 0.24177888388784793 0.00039635354736424893 0.00036537618918175717 ['ENSG00000182195|ENST00000370526|LDOC1'] 35722 6891 GTFSTVTSTVK True NCI_RA007_Epitope_Rep3 1126.5870038394198 1126.5859099358602 34.212 2 0.2417698265464964 0.00039635354736424893 0.0003654521775697901 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 24011 8118 EYMKHTRLF True PC9_epitope_Rep6 1223.6121134717898 1223.61046490379 40.761 3 0.24176792420001214 0.00039635354736424893 0.00036546813970235275 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 17584 21771 EHIGIGLLSL True PC9_epitope_Rep3 1050.60734536118 1050.6062499358602 89.039 2 0.24176570881928988 0.00039635354736424893 0.000365486729311291 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 106401 11040 STIFYYVQK True NCI_RA007_Epitope_Rep5 1147.5913609438696 1147.59026993586 49.1 2 0.24173114046755573 0.00039635354736424893 0.0003657769206740371 ['ENSG00000092148|ENST00000399332|HECTD1'] 91212 15603 RGDLPFVVPR True PC9_epitope_Rep3 1154.6560268890998 1154.65438490379 65.167 3 0.2417026497922231 0.00039635354736424893 0.00036601626538905084 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 108716 22263 SYRELFEFF True PC9_epitope_Rep2 1236.5815245361598 1236.5804299358601 91.114 2 0.24168749095209496 0.00039635354736424893 0.00036614367591603796 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 142883 15831 YYTPITPHL True PC9_epitope_Rep6 1103.56514619603 1103.56404993586 73.159 2 0.24168669993437594 0.00039635354736424893 0.0003661503256657295 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 106208 6944 STDVSQPPHVY True H1975_Epitope_Rep2 1228.5724164044402 1228.5713099358602 31.63 2 0.24167529213929637 0.00039635354736424893 0.00036624623961918395 ['nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENSG00000086200|ENST00000325324|IPO11', 'ENST00000502862.1_1_5:61811283-61822085:+|nuORF'] 3424 9664 [Acetylation]-AGITTIEAVKR True H1975_Epitope_Rep1 1199.68738690333 1199.68628993586 42.098 2 0.24167507453201986 0.00039635354736424893 0.00036624806945287814 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 39726 8156 HLVDEPQNLIK True NCI_RA007_Epitope_Rep5 1304.7088503076 1304.7077499358602 38.054 2 0.24165721796061707 0.00039635354736424893 0.0003663982544862242 ['CON__P02769'] 88855 10433 QVDEDALTY True H1975_Epitope_Rep3 1052.4662200004 1052.4651299358602 45.19 2 0.24164948436775333 0.00039635354736424893 0.0003664633180479207 ['ENSG00000114480|ENST00000429644|GBE1'] 21974 10960 ESENVVCHFY True H1975_Epitope_Rep3 1225.50737361973 1225.50626993586 47.246 2 0.24164569041671272 0.00039635354736424893 0.00036649524120892815 ['ENST00000463385.5_1_2:99938416-99949470:-|nuORF', 'nc|ENSG00000115514|O14530-2|TXNDC9', 'ENSG00000115514|ENST00000264255|TXNDC9'] 85743 15926 QHDFQAPYL True PC9_epitope_Rep2 1117.5192586327698 1117.5181699358602 66.509 2 0.24161407637300536 0.00039635354736424893 0.00036676135737946137 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 22373 15851 ETEEDKFLLLY True H1975_Epitope_Rep1 1398.6918628307799 1398.69076993586 66.278 2 0.24152996014537664 0.00039635354736424893 0.0003674703630627947 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 78673 11820 NYYEQWGK True PC9_epitope_Rep1 1086.47705946762 1086.4759699358601 50.333 2 0.2415261404170583 0.00039635354736424893 0.00036750259170579094 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 47721 19142 IYDKFIAQL True PC9_epitope_Rep4 1109.6120963884498 1109.61098993586 81.725 2 0.24151882492999868 0.00039635354736424893 0.00036756432343875844 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 119835 11793 VDDGLISLQVK True H1975_Epitope_Rep1 1185.6605031328502 1185.6594099358601 50.354 2 0.24151239211358774 0.00039635354736424893 0.00036761861534893213 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 35619 12748 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 54.095 2 0.24150644504478327 0.00039635354736424893 0.00036766881478382063 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 17988 15432 EIDMNDIKAFY True H1975_Epitope_Rep2 1357.62240337197 1357.6213099358602 64.517 2 0.24150516083916515 0.00039635354736424893 0.00036767965571499406 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 108541 19373 SYNDELQFLEK True PC9_epitope_Rep2 1384.6510606479599 1384.64996993586 79.894 2 0.24150318109591923 0.00039635354736424893 0.00036769636882269063 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF', 'ENST00000463455.1_1_22:32804140-32808230:-|nuORF'] 40232 11562 HQIEAVDGEEL True PC9_epitope_Rep4 1238.5778957076998 1238.57678993586 52.233 2 0.24148896434038072 0.00039635354736424893 0.0003678164098830531 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 15198 8739 EADEYLDKY True H1975_Epitope_Rep2 1144.49243474824 1144.4913299358602 38.576 2 0.24147852375818488 0.00039635354736424893 0.00036790459135259494 ['ENSG00000117724|ENST00000366955|CENPF'] 23664 19693 EYALLYHTL True PC9_epitope_Rep2 1121.5757108797302 1121.57460993586 81.135 2 0.2414715135127552 0.00039635354736424893 0.0003679638119921588 ['AOC1|p.P703Qfs*12|1|0.24|ENSG00000002726|chr7:150861059-150861059|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 55049 20542 KYSPFVVSF True PC9_epitope_Rep3 1072.5593325396 1072.55822993586 84.278 2 0.24145988623933898 0.00039635354736424893 0.00036806205710269513 ['ENSG00000086544|ENST00000263370|ITPKC'] 52632 20281 KLQEFLQTL True PC9_epitope_Rep5 1118.63356010902 1118.6324699358602 83.063 2 0.241443656733469 0.00039635354736424893 0.0003681992329482293 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'nc|ENSG00000140525|Q9NVI1-4|FANCI', 'ENST00000568670.5_1_15:89790878-89801939:+|nuORF', 'ENST00000570110.1_1_15:89790878-89802018:+|nuORF'] 17931 12255 EIAQDFKTDLR True PC9_epitope_Rep5 1334.68302948258 1334.6819299358601 52.126 2 0.24142523014598608 0.00039635354736424893 0.0003683550412330708 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 53955 4124 KTVPVEAVTSK True NCI_RA007_Epitope_Rep4 1157.6655885132898 1157.66448993586 22.15 2 0.24142098868451362 0.00039635354736424893 0.00036839091479493367 ['ENST00000393747.3_1_11:70269077-70281851:+|nuORF', 'nc|ENSG00000085733|Q14247-3|CTTN', 'ENSG00000085733|ENST00000301843|CTTN', 'nc|ENSG00000085733|Q14247-2|CTTN', 'CTTN|p.P403Lfs*29|1|0.26|ENSG00000085733|chr11:70431218-70431218|C/-|frameshift_variant'] 65951 14488 LSDTKYLEMIY True H1975_Epitope_Rep2 1374.6741045916601 1374.6730099358601 60.885 2 0.24141026886931527 0.00039635354736424893 0.0003684815967930305 ['ENSG00000205339|ENST00000379719|IPO7'] 135419 16459 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.55560993586 68.307 2 0.2413764912172138 0.00039635354736424893 0.0003687674780899101 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 109475 16873 TDLLLEPYNK True PC9_epitope_Rep5 1204.6339540318397 1204.6328499358601 69.912 2 0.2413709957439384 0.00039635354736424893 0.00036881401073561544 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 52522 7317 KLEAEIATYR True NCI_RA007_Epitope_Rep2 1192.6451874218799 1192.6440899358602 33.083 2 0.24136111855437287 0.00039635354736424893 0.00036889766014921776 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 86564 10959 QLDTRVSEFY True H1975_Epitope_Rep1 1256.60371653272 1256.60260993586 47.118 2 0.24135219061331428 0.00039635354736424893 0.00036897328679774905 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 27814 18944 FQDDRYLYM True PC9_epitope_Rep3 1249.54375912845 1249.5426699358602 78.093 2 0.24132752917887026 0.00039635354736424893 0.00036918226925501224 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ROCK1|p.G236Lfs*5|1|0.06|ENSG00000067900|chr18:21042679-21042680|-/TCAA|frameshift_variant', 'ROCK1|p.G236Dfs*12|1|0.06|ENSG00000067900|chr18:21042678-21042679|-/AT|frameshift_variant', 'ROCK1|p.V266Yfs*8|1|0.19|ENSG00000067900|chr18:21042589-21042589|C/-|frameshift_variant', 'ENSG00000134318|ENST00000315872|ROCK2'] 66195 9437 LSERYAELY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 41.214 2 0.24132690245121355 0.00039635354736424893 0.00036918758172875635 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 59347 20400 LFKNDPLFF True PC9_epitope_Rep4 1139.6015317047497 1139.6004299358601 86.616 2 0.24132413350124854 0.00039635354736424893 0.0003692110537248229 ['ENSG00000103642|ENST00000261893|LACTB', 'nc|ENSG00000103642|P83111-2|LACTB'] 133939 9249 VYIKHPVSL True PC9_epitope_Rep2 1054.61751612206 1054.61640993586 40.916 2 0.24132077587577627 0.00039635354736424893 0.00036923951784737066 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 85755 17926 QHDFTSQIF True PC9_epitope_Rep5 1121.51417325233 1121.5130699358601 73.969 2 0.2413106765559797 0.00039635354736424893 0.00036932514765373076 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 11057 14649 DAVLLVFANK True NCI_RA007_Epitope_Rep1 1088.62299542532 1088.62188993586 61.035 2 0.2413009693963049 0.00039635354736424893 0.0003694074711955358 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 27159 18687 FLLDPVKGERL True PC9_epitope_Rep1 1285.73942215989 1285.73776490379 76.67 3 0.24129267294818127 0.00039635354736424893 0.0003694778454968852 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 1681 5752 AEGDVAALNR True NCI_RA007_Epitope_Rep1 1014.5094222250599 1014.50832993586 26.43 2 0.24128604856421446 0.00039635354736424893 0.0003695340462322861 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 77861 10807 NVEQAFQTIAR True H1975_Epitope_Rep3 1275.65714908791 1275.6560499358602 46.649 2 0.2412834876923845 0.00039635354736424893 0.0003695557747585633 ['ENSG00000075785|ENST00000265062|RAB7A'] 137551 8920 YEELQSLAGK True NCI_RA007_Epitope_Rep1 1136.5713537752797 1136.5702499358601 38.698 2 0.24126905646261687 0.00039635354736424893 0.00036967824504564466 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 49880 8735 KIFSGVFVK True NCI_RA007_Epitope_Rep5 1023.6117024656298 1023.61060993586 40.265 2 0.24124114390190882 0.00039635354736424893 0.0003699152398407208 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 6925 15791 AQIKELEEL True PC9_epitope_Rep5 1071.58119018299 1071.58008993586 65.728 2 0.24120038626481013 0.00039635354736424893 0.0003702615709466642 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'NUMA1|p.E1073K|1|0.19|ENSG00000137497|chr11:72014286-72014286|C/T|missense_variant'] 139119 9488 YLDPNQRDLY True H1975_Epitope_Rep3 1295.61461556959 1295.61350993586 41.5 2 0.2412000238468258 0.00039635354736424893 0.0003702646519902068 ['ENSG00000189144|ENST00000536220|ZNF573'] 42464 10335 IEEDIRDLAA True H1975_Epitope_Rep2 1143.57716743171 1143.57606993586 44.762 2 0.24119944958553421 0.00039635354736424893 0.0003702695340413237 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 133800 19967 VYFPDQHINF True PC9_epitope_Rep3 1278.6033226099 1278.6022299358601 82.048 2 0.24118904814885664 0.00039635354736424893 0.0003703579724644773 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 14286 16443 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep1 1204.6485589305998 1204.64746993586 68.073 2 0.2411696300041371 0.00039635354736424893 0.00037052313232301533 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 29872 11078 FVTNDAATILR True NCI_RA007_Epitope_Rep1 1219.65608645875 1219.6549899358602 47.088 2 0.2411538200768369 0.00039635354736424893 0.00037065765725761144 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 100737 6916 SLDVNQDSELK True H1975_Epitope_Rep3 1246.60411045554 1246.6030099358602 31.562 2 0.24112594954442246 0.00039635354736424893 0.0003708949238541472 ['ENSG00000189171|ENST00000476133|S100A13'] 9122 15078 AVIVLVENFYK True NCI_RA007_Epitope_Rep5 1293.7332741502898 1293.7321699358602 64.665 2 0.24112465992069576 0.00039635354736424893 0.00037090590632732584 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 53680 11108 KSDVEAIFSK True PC9_epitope_Rep5 1122.5920892198599 1122.59044490379 47.715 3 0.24112340008774677 0.00039635354736424893 0.0003709166354163046 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 26319 18208 FHNELLTQL True PC9_epitope_Rep4 1113.5818588893299 1113.5807699358602 78.105 2 0.2411219424594411 0.00039635354736424893 0.0003709290493741377 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 24233 7146 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56954993586 32.5 2 0.24111304437229322 0.00039635354736424893 0.0003710048393745957 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 116232 15492 TTDDWKDFLY True H1975_Epitope_Rep3 1302.57683307854 1302.5757299358602 65.007 2 0.2410986949062547 0.00039635354736424893 0.00037112709454659946 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 90587 8589 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 38.029 2 0.24109594657371244 0.00039635354736424893 0.0003711505145132597 ['ENSG00000026025|ENST00000544301|VIM'] 11804 7404 DHFASVHSV True PC9_epitope_Rep3 997.46174375665 997.46064993586 33.487 2 0.24108832219137913 0.00039635354736424893 0.0003712154935884007 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 37754 21186 GWYDEEHPLVF True PC9_epitope_Rep2 1390.6193665968601 1390.61826993586 86.947 2 0.24108345757984287 0.00039635354736424893 0.0003712569583786622 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 45482 10556 IQLVEEELDR True H1975_Epitope_Rep3 1242.6455813446998 1242.64448993586 45.67 2 0.24106562461336678 0.00039635354736424893 0.00037140900206764007 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 118564 20373 TYQRWQFTL True PC9_epitope_Rep3 1241.61930702721 1241.61820993586 83.615 2 0.2410621994514307 0.00039635354736424893 0.00037143821211143993 ['ENSG00000174231|ENST00000304992|PRPF8'] 43709 11469 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 48.996 2 0.24104775809514956 0.00039635354736424893 0.0003715613944434644 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 55068 13516 KYTKIFNDF True PC9_epitope_Rep4 1174.60225998074 1174.60116993586 59.885 2 0.24102919415498508 0.00039635354736424893 0.00037171980190598433 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 134769 12589 VYTTTVHWL True NCI_RA007_Epitope_Rep4 1118.5760452329 1118.57494993586 55.445 2 0.2410246012863452 0.00039635354736424893 0.00037175900364111626 ['ENSG00000174231|ENST00000304992|PRPF8'] 140764 12754 YSDFPFHEDY True H1975_Epitope_Rep1 1318.51423282198 1318.5131299358602 54.118 2 0.24101385251946514 0.00039635354736424893 0.00037185076432120595 ['FMO4|p.S512Yfs*4|1|0.05|ENSG00000076258|chr1:171341697-171341697|C/-|frameshift_variant', 'ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 89462 20673 QYFDSRGMFI True PC9_epitope_Rep1 1262.5753936098997 1262.5742899358602 84.342 2 0.24100108296516376 0.00039635354736424893 0.00037195980569609393 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 15650 6298 EATDAIGHLDR True NCI_RA007_Epitope_Rep2 1196.5785644140399 1196.57692490379 29.103 3 0.2409756532102579 0.00039635354736424893 0.00037217705018507827 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 108692 9518 SYRDSYESY True PC9_epitope_Rep1 1168.4672826295598 1168.46618993586 41.466 2 0.24095824545427882 0.00039635354736424893 0.00037232583670405615 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 88183 19312 QRVWAEYAL True PC9_epitope_Rep1 1134.5821932425 1134.58108993586 79.088 2 0.2409547343795327 0.00039635354736424893 0.00037235585357838055 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF'] 98252 10383 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 44.949 2 0.24095268561861213 0.00039635354736424893 0.0003723733699630679 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 90226 11073 REEDFYYTEV True H1975_Epitope_Rep2 1349.5775613545297 1349.5764699358601 47.625 2 0.24094936432728306 0.00039635354736424893 0.00037240176791481107 ['ENSG00000186918|ENST00000344423|ZNF395'] 135172 12247 WEQDGGRWLP True H1975_Epitope_Rep1 1242.5781704912197 1242.5770699358602 52.131 2 0.24093554148692525 0.00039635354736424893 0.00037251998032338316 ['ENSG00000166592|ENST00000299759|RRAD'] 14133 8727 DSDFRKDDFY True H1975_Epitope_Rep2 1306.5465955794198 1306.5454899358601 38.529 2 0.24093477141258637 0.00039635354736424893 0.00037252656707662224 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 98363 11022 SEYLRYEDTL True H1975_Epitope_Rep2 1287.59829679911 1287.5971899358601 47.426 2 0.24088502815975954 0.00039635354736424893 0.00037295228852688523 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 28103 12259 FQYDHEAFL True H1975_Epitope_Rep1 1168.5189242795998 1168.5178299358602 52.177 2 0.24086479831272226 0.00039635354736424893 0.0003731255626954835 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 110599 16775 TFSWASVTSK True PC9_epitope_Rep1 1112.55022440788 1112.54912993586 69.349 2 0.24076663482819016 0.00039635354736424893 0.0003739675068694747 ['ENSG00000145907|ENST00000356245|G3BP1'] 48284 12546 IYQRDPLKL True PC9_epitope_Rep3 1144.6604435631998 1144.65934993586 53.28 2 0.2407653001535611 0.00039635354736424893 0.00037397896743839493 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 75915 9523 NLQYYDISAK True NCI_RA007_Epitope_Rep2 1213.5979028762902 1213.5968099358602 41.656 2 0.24074453339219629 0.00039635354736424893 0.0003741573326141594 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 135173 12365 WEQDGGRWLP True H1975_Epitope_Rep2 1242.5781704912197 1242.5770699358602 52.647 2 0.24074452112393974 0.00039635354736424893 0.0003741574380111096 ['ENSG00000166592|ENST00000299759|RRAD'] 10993 11052 DALNIETAIK True H1975_Epitope_Rep3 1086.5920892198599 1086.59098993586 47.601 2 0.2407377192491675 0.00039635354736424893 0.00037421587770075025 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 16453 14928 EELEEVIKDI True H1975_Epitope_Rep3 1215.6234489177898 1215.62234993586 62.808 2 0.24071785966233794 0.00039635354736424893 0.00037438655776636786 ['nc|ENSG00000143106|P28066-2|PSMA5', 'ENSG00000143106|ENST00000271308|PSMA5'] 54224 5685 KVYNGILEK True NCI_RA007_Epitope_Rep4 1062.6073453611798 1062.6062499358602 28.476 2 0.2406620561801881 0.00039635354736424893 0.00037486656996095464 ['ENSG00000109689|ENST00000467087|STIM2', 'STIM2|p.A667S|1|0.13|ENSG00000109689|chr4:27022754-27022754|G/T|missense_variant', 'ENST00000467011.5_1_4:27022655-27024615:+|nuORF', 'nc|ENSG00000109689|Q9P246-2|STIM2'] 75584 13630 NLDIIQQEY True H1975_Epitope_Rep2 1134.55570371114 1134.55460993586 57.566 2 0.24065543049721633 0.00039635354736424893 0.0003749236039529647 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 42732 10110 IELAYEQVAKA True H1975_Epitope_Rep3 1233.6605031328497 1233.6594099358601 43.929 2 0.24065470508227566 0.00039635354736424893 0.0003749298488656946 ['ENSG00000213719|ENST00000375784|CLIC1'] 64874 11162 LQDYFDGNLK True NCI_RA007_Epitope_Rep1 1211.58225281215 1211.5811499358601 47.415 2 0.24065008155856438 0.00039635354736424893 0.00037496965405690256 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 47734 19854 IYDSVKVYF True PC9_epitope_Rep1 1132.5804619069997 1132.57936993586 81.184 2 0.24064582818946517 0.00039635354736424893 0.0003750062762278794 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 137549 8175 YEELQSLAGK True H1975_Epitope_Rep3 1136.5713537752797 1136.5702499358601 36.425 2 0.2405878981388325 0.00039635354736424893 0.00037550542028480884 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 100769 10639 SLEDQVEM[Oxidation]LR True H1975_Epitope_Rep1 1234.58635259686 1234.58524993586 45.88 2 0.24057589051333475 0.00039635354736424893 0.00037560896521185373 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 74007 14341 NDEELNKLLGK True PC9_epitope_Rep3 1271.6721304457099 1271.6710299358601 60.248 2 0.24056401680873163 0.00039635354736424893 0.00037571138346219 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 59735 10424 LGDLYEEEMR True NCI_RA007_Epitope_Rep1 1253.5598031154097 1253.5587099358602 44.53 2 0.24053222962742313 0.00039635354736424893 0.0003759857059866219 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 53300 15425 KQLDDLKVEL True PC9_epitope_Rep5 1199.6761531969898 1199.6750499358602 64.341 2 0.2405264825449881 0.00039635354736424893 0.0003760353245927268 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 77573 10289 NTDPSIVM[Oxidation]TY True H1975_Epitope_Rep3 1155.51179067427 1155.51068993586 44.628 2 0.24052348992908262 0.00039635354736424893 0.00037606116455149983 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 72665 5383 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 25.742 2 0.2405234587547258 0.00039635354736424893 0.0003760614337381139 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 141262 5164 YTDHQNSSSYY True H1975_Epitope_Rep3 1363.5316737912701 1363.53056993586 24.964 2 0.2405124287845099 0.00039635354736424893 0.000376156688261936 ['ENSG00000125398|ENST00000245479|SOX9'] 95704 21489 RYFLPPYTF True PC9_epitope_Rep5 1202.6124307416196 1202.61132993586 87.691 2 0.2405095891807604 0.00039635354736424893 0.00037618121491943973 ['ENSG00000023608|ENST00000216294|SNAPC1'] 29368 10305 FVDKNNDLLY True H1975_Epitope_Rep2 1239.61355294043 1239.61244993586 44.644 2 0.2405055460040442 0.00039635354736424893 0.00037621614002819847 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 47324 6742 IVEPPENIQEK True H1975_Epitope_Rep1 1294.6768814729796 1294.6757899358602 30.974 2 0.24050203614069526 0.00039635354736424893 0.00037624646099336653 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 140816 4458 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 22.262 2 0.24049314963346863 0.00039635354736424893 0.00037632324060333 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 115761 6681 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 30.653 2 0.24047392985368818 0.00039635354736424893 0.00037648935365685974 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 39509 4101 HLENNPALEK True NCI_RA007_Epitope_Rep2 1163.5934862021898 1163.5923899358602 20.591 2 0.24046969509838748 0.00039635354736424893 0.0003765259637604947 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 107033 4722 SVFQTTDTK True NCI_RA007_Epitope_Rep3 1025.5029398622898 1025.50184993586 25.523 2 0.2404534489451898 0.00039635354736424893 0.00037666644735214415 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 49924 19713 KILDLETQL True PC9_epitope_Rep1 1071.61757569171 1071.61646993586 80.652 2 0.2404420722701277 0.00039635354736424893 0.0003767648549299315 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 90085 4605 REAEHLYHTL True NCI_RA007_Epitope_Rep5 1267.6309343400699 1267.62928490379 24.385 3 0.24043634109707354 0.00039635354736424893 0.00037681443900991544 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 139008 18398 YKVEYPIMY True PC9_epitope_Rep4 1204.58383303528 1204.58272993586 78.833 2 0.24042446075348375 0.00039635354736424893 0.0003769172443816807 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 90942 7190 REYQELM[Oxidation]SV True H1975_Epitope_Rep2 1169.5386741284499 1169.5375699358601 32.591 2 0.24039735354793992 0.00039635354736424893 0.0003771519192182957 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 105583 5302 SSDNATLTHY True H1975_Epitope_Rep1 1107.4832670468702 1107.4821699358602 25.454 2 0.24039126980323056 0.00039635354736424893 0.0003772046080691136 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 8110 8592 ATEDPWKTNY True H1975_Epitope_Rep1 1223.54586730343 1223.5447699358601 37.977 2 0.2403767803112298 0.00039635354736424893 0.00037733012542605127 ['ENSG00000139684|ENST00000378720|ESD'] 16086 11219 EEAENTLQSFR True PC9_epitope_Rep4 1322.61025846514 1322.60916993586 50.93 2 0.2403763181087644 0.00039635354736424893 0.0003773341300122852 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 78392 20233 NYLHLDYNF True PC9_epitope_Rep2 1197.5454733806098 1197.54436993586 83.244 2 0.24037618075329706 0.00039635354736424893 0.0003773353200873112 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 8705 17141 AVAQALEVIPR True PC9_epitope_Rep3 1165.68190728377 1165.68080993586 71.089 2 0.2403725940723687 0.00039635354736424893 0.00037736639713519123 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 73871 5591 NASTDYDLSDK True H1975_Epitope_Rep3 1227.52552578167 1227.52442993586 26.547 2 0.24036512754301573 0.00039635354736424893 0.0003774310996355694 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF', 'ENST00000474162.1_1_5:60686735-60687614:-|nuORF'] 90931 9978 REYQELMNV True NCI_RA007_Epitope_Rep5 1180.55465816532 1180.5535699358602 45.022 2 0.24035896946104043 0.00039635354736424893 0.000377484471931457 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 36256 8323 GVDSSIFQNPK True NCI_RA007_Epitope_Rep3 1190.59315184902 1190.5920499358601 39.856 2 0.2403357971790609 0.00039635354736424893 0.00037768537469011764 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 109466 11099 TDLLLEPYNK True H1975_Epitope_Rep1 1204.6339540318397 1204.6328499358601 47.656 2 0.2403300853082853 0.00039635354736424893 0.0003777349128538814 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 49997 22020 KIWEELSVLEV True PC9_epitope_Rep5 1343.73366807311 1343.73256993586 89.726 2 0.2402824491142492 0.00039635354736424893 0.0003781483080116791 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 46198 20988 ISMPDFDLHL True PC9_epitope_Rep4 1186.5692456003 1186.5681499358602 88.891 2 0.2402721094177909 0.00039635354736424893 0.00037823809760789326 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 15191 13335 EAC[Carbamidomethyl]GVIVELIK True H1975_Epitope_Rep1 1229.6689599210001 1229.6678699358602 56.399 2 0.24026732363864303 0.00039635354736424893 0.0003782796644009783 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 76555 3952 NQKDPGVLDR True NCI_RA007_Epitope_Rep2 1140.58873517492 1140.5870849037901 20.01 3 0.24025289197710523 0.00039635354736424893 0.00037840503806094785 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 76983 20630 NRFNYPFEL True PC9_epitope_Rep5 1198.5771078620598 1198.5760099358602 84.404 2 0.24024558187138653 0.00039635354736424893 0.00037846855979571615 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 54668 11968 KYLSVQGQLF True NCI_RA007_Epitope_Rep3 1181.64445914589 1181.6433699358602 54.197 2 0.24023705565042394 0.00039635354736424893 0.0003785426625702731 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 31050 7174 GATEITTTITK True NCI_RA007_Epitope_Rep2 1134.61321858726 1134.6121299358601 32.526 2 0.24021251432720656 0.00039635354736424893 0.0003787560364372591 ['CON__ENSEMBL:ENSBTAP00000024146'] 118071 13603 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.5429699358601 59.011 2 0.24020654790294163 0.00039635354736424893 0.0003788079295761481 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 94909 7358 RTEPFQDGY True H1975_Epitope_Rep3 1111.4934378077498 1111.4923499358601 33.278 2 0.2401882515266437 0.00039635354736424893 0.00037896710727697346 ['ENSG00000164543|ENST00000319357|STK17A'] 13888 7130 DQVANSAFVER True H1975_Epitope_Rep1 1234.59421447818 1234.5931099358602 32.45 2 0.24017386927025167 0.00039635354736424893 0.00037909227939096596 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 139099 11458 YLDIPNPRY True H1975_Epitope_Rep2 1149.58185888933 1149.5807699358602 49.128 2 0.24012966212655645 0.00039635354736424893 0.00037947728408485555 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 84767 5061 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 23.771 2 0.24012557718486646 0.00039635354736424893 0.0003795128800612583 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 95667 11543 RYFDPANGKF True PC9_epitope_Rep4 1213.5880068989297 1213.58635490379 52.162 3 0.2401097093685327 0.00039635354736424893 0.00037965118318693253 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 119818 7830 VDAQFGGIDQR True H1975_Epitope_Rep1 1204.5836497944797 1204.58254993586 35.068 2 0.24010232766547887 0.00039635354736424893 0.0003797155389827694 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF', 'ENST00000466052.1_1_1:33256818-33263474:-|nuORF', 'ENST00000470377.1_1_1:33256708-33272178:-|nuORF'] 34168 18517 GNFNYIEFTR True PC9_epitope_Rep2 1259.5934862021898 1259.5923899358602 76.57 2 0.240098731371184 0.00039635354736424893 0.0003797468964673191 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 62475 19054 LLIDELNKL True PC9_epitope_Rep6 1069.63831113629 1069.63720993586 85.935 2 0.24007670361744785 0.00039635354736424893 0.000379939021675391 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 126088 11746 VLELVSITANK True H1975_Epitope_Rep1 1185.69688864157 1185.6957899358601 50.173 2 0.2400719703995489 0.00039635354736424893 0.00037998031733986053 ['ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 70323 11238 LVSESSDVLPK True PC9_epitope_Rep1 1172.6288686514001 1172.6277699358602 48.106 2 0.24005201205678878 0.00039635354736424893 0.0003801544963903812 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 107485 9206 SVMSTVEWNK True NCI_RA007_Epitope_Rep3 1179.5594091925898 1179.55830993586 43.306 2 0.24004659154327274 0.00039635354736424893 0.0003802018157420094 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 118063 13088 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.5429699358601 58.763 2 0.2400223472891654 0.00039635354736424893 0.0003804135326460891 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 137573 6085 YEENSHLTSV True H1975_Epitope_Rep2 1177.52513185885 1177.5240299358602 28.381 2 0.23999031793828424 0.00039635354736424893 0.0003806934154810082 ['ENSG00000157557|ENST00000360938|ETS2'] 37826 11106 GYIERPQLI True NCI_RA007_Epitope_Rep4 1087.6025943339098 1087.6014899358602 49.596 2 0.2399873124631299 0.00039635354736424893 0.0003807196888922317 ['nc|ENSG00000164329|Q6PIY7-2|TENT2', 'ENSG00000164329|ENST00000453514|TENT2'] 84764 4740 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 22.518 2 0.23996331758122175 0.00039635354736424893 0.00038092951376507146 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 95135 4614 RVFQDVAQK True NCI_RA007_Epitope_Rep4 1089.5930922793698 1089.59198993586 24.161 2 0.23995067589018057 0.00039635354736424893 0.0003810401065347134 ['nc|ENSG00000133612|Q96P47-3|AGAP3', 'nc|ENSG00000133612|Q96P47-6|AGAP3', 'AGAP3|p.A692Cfs*27|1|0.14|ENSG00000133612|chr7:151142542-151142543|GG/-|frameshift_variant', 'nc|ENSG00000133612|Q96P47|AGAP3', 'nc|ENSG00000133612|Q96P47-2|AGAP3', 'ENSG00000133612|ENST00000397238|AGAP3', 'nc|ENSG00000133612|Q96P47-5|AGAP3', 'nc|ENSG00000157985|Q9UPQ3-3|AGAP1', 'nc|ENSG00000157985|Q9UPQ3-2|AGAP1', 'ENSG00000157985|ENST00000304032|AGAP1'] 108557 15987 SYNNFFRMF True NCI_RA007_Epitope_Rep3 1224.53861417836 1224.53750993586 70.555 2 0.23991193239986952 0.00039635354736424893 0.00038137924518636036 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 28538 6830 FSENEKNAAYY True H1975_Epitope_Rep2 1334.5778957077 1334.57678993586 31.191 2 0.23990528749506293 0.00039635354736424893 0.0003814374413395731 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'RSBN1|p.V415Mfs*25|1|0.09|ENSG00000081019|chr1:113797497-113797498|-/AT|frameshift_variant', 'nc|ENSG00000081019|Q5VWQ0-4|RSBN1'] 119751 13146 VAYEEFEKV True PC9_epitope_Rep6 1112.5389910178399 1112.5378899358602 62.208 2 0.2399037407568082 0.00039635354736424893 0.00038145098896894263 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 127490 6485 VNLPINGNGKQ True NCI_RA007_Epitope_Rep3 1152.62512068364 1152.62402993586 32.54 2 0.23989796079057232 0.00039635354736424893 0.00038150161902659405 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 76621 12636 NQQEFVRAL True PC9_epitope_Rep2 1103.5723568347898 1103.5712499358601 53.914 2 0.23987336304790685 0.00039635354736424893 0.0003817171602262631 ['ENSG00000105372|ENST00000598742|RPS19'] 22303 9954 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 43.279 2 0.23985820820239923 0.00039635354736424893 0.00038185001750450613 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 86573 17734 QLEDELVSLQK True PC9_epitope_Rep1 1300.6874461566802 1300.68634993586 73.011 2 0.23985292585891752 0.00039635354736424893 0.00038189633687816144 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 90962 6467 REYWNEQSA True H1975_Epitope_Rep2 1181.51015050105 1181.50904993586 29.792 2 0.23984364531708605 0.00039635354736424893 0.00038197772896837257 ['ENSG00000065308|ENST00000182527|TRAM2'] 75609 7606 NLDQATRVAY True H1975_Epitope_Rep2 1149.5778361380499 1149.5767299358602 34.209 2 0.2398333521274802 0.00039635354736424893 0.00038206802251851456 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 107545 15325 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 71.076 2 0.2398218945787994 0.00039635354736424893 0.000382168555194206 ['ENSG00000073756|ENST00000367468|PTGS2'] 140305 7844 YRDEFSHQV True PC9_epitope_Rep5 1179.53088594563 1179.52924490379 35.115 3 0.23981690611117584 0.00039635354736424893 0.0003822123341030376 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.T1015Pfs*15|1|0.53|ENSG00000109111|chr17:28688125-28688125|G/-|frameshift_variant'] 70466 12152 LVTYVPVTTFK True NCI_RA007_Epitope_Rep5 1266.72237511342 1266.7212699358602 53.397 2 0.2398055457525835 0.00039635354736424893 0.00038231205164754333 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 59196 20394 LFDQAFGLPR True PC9_epitope_Rep1 1162.6134933707797 1162.6123899358602 83.266 2 0.23979779284494684 0.00039635354736424893 0.00038238011913647215 ['ENSG00000106211|ENST00000248553|HSPB1'] 80091 18110 PFLQASPHF True PC9_epitope_Rep1 1042.5236157372199 1042.5225099358602 74.452 2 0.23978794273925932 0.00039635354736424893 0.00038246661673335143 ['ENSG00000147689|ENST00000690554|FAM83A'] 118212 9351 TYKVISNEF True NCI_RA007_Epitope_Rep3 1099.5549754351498 1099.5538699358601 43.874 2 0.23976830731928203 0.00039635354736424893 0.00038263910152362495 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 116351 7913 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51748993586 35.411 2 0.23975824485203917 0.00039635354736424893 0.0003827275241896731 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 24049 14330 EYNNNFHVL True PC9_epitope_Rep4 1148.5250722892001 1148.5239699358601 63.021 2 0.2397577708334817 0.00039635354736424893 0.00038273169007356657 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 54593 18976 KYITQGQLLQF True PC9_epitope_Rep4 1337.73433677945 1337.7332299358602 81.082 2 0.23975319712343676 0.00039635354736424893 0.0003827718881886996 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 70322 11139 LVSESSDVLPK True PC9_epitope_Rep1 1172.6288686514001 1172.6277699358602 47.731 2 0.239727245325286 0.00039635354736424893 0.00038300005747267477 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 140792 8140 YSDKYFDEHY True H1975_Epitope_Rep3 1365.55134660669 1365.54970490379 36.287 3 0.2397191348918136 0.00039635354736424893 0.00038307139271322226 ['ENSG00000123975|ENST00000314355|CKS2'] 74702 6913 NGTDPEDVIR True H1975_Epitope_Rep3 1114.5254662120199 1114.52436993586 31.551 2 0.2397080551718261 0.00039635354736424893 0.0003831688658223286 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 22280 13764 ETDEKDFYLYY True H1975_Epitope_Rep2 1484.6347418774799 1484.6336499358601 58.088 2 0.23970505391165514 0.00039635354736424893 0.000383195273493098 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 106395 11340 STIFYYVQK True NCI_RA007_Epitope_Rep2 1147.5913609438696 1147.59026993586 48.7 2 0.23968903991761392 0.00039635354736424893 0.0003833362092565312 ['ENSG00000092148|ENST00000399332|HECTD1'] 68406 9973 LTETIYKNYY True H1975_Epitope_Rep1 1306.64451871554 1306.64342993586 43.297 2 0.2396867675927569 0.00039635354736424893 0.0003833562117168093 ['ENSG00000146834|ENST00000310512|MEPCE', 'nc|ENSG00000289690|Q7L2J0-2|MEPCE'] 88565 12660 QTDIQGALSAY True H1975_Epitope_Rep1 1165.5615173675699 1165.5604299358602 53.75 2 0.2396719472082467 0.00039635354736424893 0.00038348669592415857 ['ENSG00000198730|ENST00000361367|CTR9'] 93620 8202 RQPYAVSEL True NCI_RA007_Epitope_Rep3 1061.5505587610498 1061.54946993586 39.395 2 0.23963317103340645 0.00039635354736424893 0.00038382830664760977 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 17804 15336 EHSLVIDTL True PC9_epitope_Rep6 1025.53932537101 1025.53822993586 71.118 2 0.23960802579319018 0.00039635354736424893 0.00038404999454478975 ['ENSG00000143256|ENST00000368010|PFDN2'] 134855 13412 VYVERAEVL True PC9_epitope_Rep5 1076.5866099165999 1076.58550993586 56.606 2 0.2396073136715746 0.00039635354736424893 0.0003840562746897925 ['ENSG00000089234|ENST00000419234|BRAP'] 9321 3930 AVQRTLLEK True NCI_RA007_Epitope_Rep3 1056.6291434349198 1056.6280499358602 21.792 2 0.2395947836428312 0.00039635354736424893 0.00038416679288808713 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 14801 9238 DVQM[Oxidation]LQDAISK True H1975_Epitope_Rep3 1262.6176527251398 1262.6165499358601 40.526 2 0.2395901818186738 0.00039635354736424893 0.00038420739021367487 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 61494 4128 LKDDEVAQLKK True NCI_RA007_Epitope_Rep4 1285.7241660185698 1285.7225249037901 22.165 3 0.23958327964985515 0.00039635354736424893 0.00038426828926325707 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 69673 12789 LVDTFLEDVK True H1975_Epitope_Rep3 1177.6230549949698 1177.6219499358601 54.41 2 0.2395758570859506 0.00039635354736424893 0.0003843337906540978 ['CON__P34955'] 106564 5243 STMSTNGIPR True NCI_RA007_Epitope_Rep3 1062.51279335334 1062.5116899358602 27.627 2 0.23956578383995644 0.00039635354736424893 0.00038442270124864746 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 6941 16567 AQIKPFYTV True PC9_epitope_Rep3 1065.5858816406098 1065.58478993586 68.864 2 0.23956331521779006 0.00039635354736424893 0.00038444449346594634 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 53162 15673 KQALKYFNL True PC9_epitope_Rep1 1123.6389798426299 1123.6378899358601 65.108 2 0.23956133197426882 0.00039635354736424893 0.00038446200181131056 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 17987 15306 EIDMNDIKAFY True H1975_Epitope_Rep1 1357.62240337197 1357.6213099358602 64.143 2 0.239557221420034 0.00039635354736424893 0.00038449829289349694 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 134743 19386 VYTSKSDVWSF True PC9_epitope_Rep1 1317.62411762413 1317.6230299358601 79.378 2 0.23955606714736188 0.00039635354736424893 0.0003845084843036362 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 106325 16391 STFVLDEFKR True PC9_epitope_Rep3 1240.6451874218799 1240.6435349037902 68.186 3 0.23952450196771918 0.00039635354736424893 0.00038478728751599445 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 107650 10135 SVQGIILYR True NCI_RA007_Epitope_Rep4 1047.6076797143498 1047.60658993586 45.842 2 0.23951615677347057 0.00039635354736424893 0.00038486103132136636 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 72679 5470 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 26.093 2 0.23945934101746036 0.00039635354736424893 0.00038536347084073506 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 135106 8025 WEEERNFGA True H1975_Epitope_Rep2 1136.4886867804798 1136.4875899358601 35.816 2 0.23945858586793706 0.00039635354736424893 0.0003853701532926435 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000515226.5_1_5:71524027-71524234:-|nuORF', 'ENST00000522562.5_1_5:71523001-71533927:-|nuORF'] 42729 10126 IELAYEQVAKA True H1975_Epitope_Rep1 1233.6605031328497 1233.6594099358601 43.886 2 0.23944635421883345 0.00039635354736424893 0.0003854784095112716 ['ENSG00000213719|ENST00000375784|CLIC1'] 111428 13134 THSNTIVVSL True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 58.414 2 0.23944146658199322 0.00039635354736424893 0.00038552167607292475 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 36229 12315 GVDDAANFRTV True PC9_epitope_Rep2 1163.5571006934701 1163.5560099358602 52.682 2 0.23943204664253934 0.00039635354736424893 0.000385605077430543 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 26383 14449 FHVEPGLQRL True PC9_epitope_Rep5 1194.6509415086598 1194.6493049037902 60.579 3 0.23942910975060722 0.00039635354736424893 0.00038563108350325503 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 112423 12142 TLDAGKFQIY True H1975_Epitope_Rep2 1154.5971746003 1154.5960699358602 51.788 2 0.23942246221174782 0.00039635354736424893 0.00038568995371860077 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 134231 16442 VYMELSQKL True PC9_epitope_Rep1 1109.57908200801 1109.5779899358602 68.069 2 0.23940420870885373 0.00039635354736424893 0.00038585165203395075 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 103168 11588 SPIENIQRVA True PC9_epitope_Rep4 1125.6142216467701 1125.6131299358601 52.333 2 0.23939952950018467 0.00039635354736424893 0.0003858931136643763 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 141677 7260 YTTDRVM[Oxidation]TV True PC9_epitope_Rep5 1100.5172104078802 1100.5161099358602 32.888 2 0.23937918786630302 0.00039635354736424893 0.00038607340918359463 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 95292 6285 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.6641699358602 31.725 2 0.23935569779367255 0.00039635354736424893 0.0003862817156111202 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 43074 20054 IEVIEIMTDR True PC9_epitope_Rep3 1217.63257413285 1217.6314699358602 82.387 2 0.23933314024214816 0.00039635354736424893 0.0003864818586829771 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 136772 18979 WYQTKFETL True PC9_epitope_Rep5 1214.5971746002997 1214.5960699358602 78.028 2 0.2393256760609384 0.00039635354736424893 0.0003865481079255661 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 24150 15168 EYQDLLNVK True PC9_epitope_Rep2 1120.5764391557198 1120.57534993586 63.601 2 0.23931288077356708 0.00039635354736424893 0.0003866617005438175 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 116344 8033 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51807496793 35.849 1 0.23928748267242758 0.00039635354736424893 0.0003868872762530394 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 103163 12944 SPIENIQRVA True PC9_epitope_Rep1 1125.6142216467701 1125.6131299358601 54.66 2 0.23928648516229775 0.00039635354736424893 0.0003868961384296711 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 12086 5336 DHVSIVEPK True NCI_RA007_Epitope_Rep2 1022.53965972418 1022.53856993586 25.375 2 0.2392744742159048 0.00039635354736424893 0.00038700286323593066 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF'] 24396 18941 FAAPEKDIFL True PC9_epitope_Rep4 1149.60701100801 1149.6059099358602 80.944 2 0.23926867208925492 0.00039635354736424893 0.00038705442935378957 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 118087 20061 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 82.218 2 0.23926312634778502 0.00039635354736424893 0.00038710372330212097 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 9812 12339 AYLEAIHNF True NCI_RA007_Epitope_Rep1 1076.52909504048 1076.5279899358602 51.968 2 0.23925506501697563 0.00039635354736424893 0.00038717538857873464 ['ENSG00000042753|ENST00000263270|AP2S1'] 117605 12040 TVTDFPGFDER True NCI_RA007_Epitope_Rep1 1282.5829810881398 1282.58188993586 50.819 2 0.23923202888665343 0.00039635354736424893 0.00038738025326121364 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 78147 12117 NYAFLHRTL True PC9_epitope_Rep4 1133.59817765981 1133.59654490379 54.416 3 0.23921307985524667 0.00039635354736424893 0.0003875488520925686 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 46660 9520 ITDPDPDIRY True H1975_Epitope_Rep2 1203.57716743171 1203.57606993586 41.59 2 0.23920579799406735 0.00039635354736424893 0.0003876136619586422 ['ENSG00000198793|ENST00000361445|MTOR'] 85871 17679 QHFDSVMQL True PC9_epitope_Rep5 1103.5069796969099 1103.50588993586 73.016 2 0.2391996048392819 0.00039635354736424893 0.0003876687906971748 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 74903 16884 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69646993586 69.768 2 0.23917486298074442 0.00039635354736424893 0.00038788911030993283 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 118013 18210 TYDYNFHSF True PC9_epitope_Rep5 1192.48253877088 1192.4814499358602 75.056 2 0.23914412444880553 0.00039635354736424893 0.000388163003628271 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 22886 6941 EVDPNIQAVR True H1975_Epitope_Rep3 1139.5934862021898 1139.5923899358602 31.66 2 0.23913780005780158 0.00039635354736424893 0.00038821938068273255 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 120646 6225 VEILANDQGNR True NCI_RA007_Epitope_Rep1 1227.6207635791898 1227.6196699358602 28.249 2 0.23913727061576637 0.00039635354736424893 0.00038822410062151796 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 878 9353 ADIEM[Oxidation]PFDPSK True H1975_Epitope_Rep3 1264.5645545231198 1264.56344993586 40.976 2 0.2391319148774841 0.00039635354736424893 0.00038827184989047607 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 119822 5807 VDATAETDLAK True H1975_Epitope_Rep1 1132.5611830144 1132.56008993586 27.409 2 0.23912816605668857 0.00039635354736424893 0.0003883052761357373 ['ENSG00000155660|ENST00000652332|PDIA4'] 86581 8167 QLEDGRTLSDY True H1975_Epitope_Rep3 1295.59935942827 1295.5982699358601 36.394 2 0.2391223758981863 0.00039635354736424893 0.0003883569095774871 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 108234 21820 SYIDLLQRF True PC9_epitope_Rep5 1153.6131590176099 1153.61206993586 88.964 2 0.23911196627744097 0.00039635354736424893 0.00038844975415626605 ['ENSG00000127580|ENST00000293883|WDR24'] 140188 22119 YQTPRLWLF True PC9_epitope_Rep1 1222.6498788795 1222.6487899358601 89.893 2 0.2390740261661461 0.00039635354736424893 0.000388788334754739 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 92587 5128 RMQKEITAL True NCI_RA007_Epitope_Rep3 1088.60121443492 1088.60010993586 27.165 2 0.23906670395493693 0.00039635354736424893 0.00038885371282200594 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 82971 11651 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.4749499358602 49.806 2 0.23906053526612592 0.00039635354736424893 0.00038890879995372277 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 140949 10113 YSEVYPGQQY True H1975_Epitope_Rep2 1232.5349682665599 1232.5338699358601 43.896 2 0.23905841817335852 0.00039635354736424893 0.00038892770765037326 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 77615 5848 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49217496793 27.482 1 0.23904891530022873 0.00039635354736424893 0.0003890125889039376 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 73372 11237 MTELYDYPKY True H1975_Epitope_Rep2 1321.5900406145297 1321.58894993586 48.265 2 0.23904771197115088 0.00039635354736424893 0.0003890233385659474 ['ENSG00000085377|ENST00000652536|PREP'] 24184 21158 EYQKVWNLF True PC9_epitope_Rep3 1225.6131590176099 1225.61206993586 86.67 2 0.2390459205173355 0.00039635354736424893 0.0003890393426562173 ['ENSG00000059378|ENST00000263549|PARP12'] 114437 6147 TPVEPEVAIHR True H1975_Epitope_Rep1 1246.6669854956199 1246.6653449037901 28.714 3 0.23904218322440995 0.00039635354736424893 0.0003890727321754656 ['nc|ENSG00000008988|P60866-2|RPS20', 'ENST00000521289.5_1_8:56986544-56986942:-|nuORF', 'ENSG00000008988|ENST00000009589|RPS20'] 41735 16700 IALTDNALIAR True PC9_epitope_Rep2 1169.67682190333 1169.67572993586 69.485 2 0.23901995627318662 0.00039635354736424893 0.0003892713703815134 ['ENSG00000147604|ENST00000352983|RPL7'] 40244 21028 HQIPEFDNLYL True PC9_epitope_Rep3 1387.67721582615 1387.67610993586 86.162 2 0.23901972666717997 0.00039635354736424893 0.00038927342285918537 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant'] 75148 6605 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59746993586 30.818 2 0.23901362001149995 0.00039635354736424893 0.0003893280150244202 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 7163 4906 AQYEDIAQK True NCI_RA007_Epitope_Rep4 1064.5138388991597 1064.51274993586 25.329 2 0.23901155429893886 0.00039635354736424893 0.00038934648378066185 ['ENSG00000167768|ENST00000252244|KRT1'] 12184 14885 DIFEAQIAGLR True NCI_RA007_Epitope_Rep2 1231.6560864587498 1231.6549899358602 62.575 2 0.23900621268469355 0.00039635354736424893 0.0003893942452113193 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 120071 11106 VDTFLEDVK True NCI_RA007_Epitope_Rep2 1064.5389910178399 1064.5378899358602 47.78 2 0.2390034817601638 0.00039635354736424893 0.00038941866572964946 ['CON__P34955'] 101045 10443 SLGEISALTSK True NCI_RA007_Epitope_Rep1 1104.60265390356 1104.60154993586 44.604 2 0.23899977531787944 0.00039635354736424893 0.00038945181199606665 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 115089 16135 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61225490379 67.054 3 0.238997708071771 0.00039635354736424893 0.0003894703003579894 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 7188 10420 AQYEHDLEV True PC9_epitope_Rep4 1102.4931034545798 1102.49200993586 47.789 2 0.23899673654515274 0.00039635354736424893 0.00038947898948515496 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 139828 9883 YPNDNFFEGK True H1975_Epitope_Rep1 1229.5353026197297 1229.5342099358602 42.948 2 0.23897844320958642 0.00039635354736424893 0.00038964263748586265 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 111381 7450 THSDIQVKL True PC9_epitope_Rep4 1039.56620882519 1039.5651099358602 36.009 2 0.23894731900907323 0.00039635354736424893 0.00038992122597563295 ['ENSG00000105223|ENST00000409735|PLD3'] 89484 19034 QYGGDLTNTF True PC9_epitope_Rep5 1114.49310345458 1114.49200993586 78.242 2 0.23894106247693692 0.00039635354736424893 0.00038997725145621426 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 134172 12181 VYLPNINKI True NCI_RA007_Epitope_Rep5 1072.62808080576 1072.6269899358601 53.507 2 0.2389344618729914 0.00039635354736424893 0.00039003636675502865 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 54546 7575 KYINTDAKF True PC9_epitope_Rep4 1098.5709598524597 1098.5698699358602 36.515 2 0.2389306644127916 0.00039635354736424893 0.0003900703810481425 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 16653 6526 EEQLQQIRAE True NCI_RA007_Epitope_Rep4 1242.6204292260197 1242.6193299358602 31.709 2 0.2389272925670223 0.00039635354736424893 0.00039010058555691345 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 122067 22295 VFYPYPQYF True PC9_epitope_Rep3 1222.5698972232997 1222.5688099358601 91.043 2 0.23891649186995295 0.00039635354736424893 0.00039019735243824347 ['ENSG00000103160|ENST00000219439|HSDL1'] 18378 12653 EITALAPSTMK True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 53.672 2 0.23891334269980719 0.00039635354736424893 0.0003902255713884107 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 66198 9595 LSERYAELY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 41.92 2 0.2389091108235411 0.00039635354736424893 0.0003902634954290843 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 133930 6482 VYIKHPVSL True NCI_RA007_Epitope_Rep3 1054.61751612206 1054.61640993586 32.529 2 0.23888833165294993 0.00039635354736424893 0.0003904497620112032 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 140832 4940 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 24.129 2 0.23887010645956203 0.00039635354736424893 0.00039061320788395836 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 74309 17798 NELESYAYSLK True PC9_epitope_Rep1 1315.62959692739 1315.6284899358602 73.255 2 0.23884916118540528 0.00039635354736424893 0.0003908011325433215 ['ENSG00000044574|ENST00000324460|HSPA5'] 77420 9315 NSLESYAFNM[Oxidation]K True H1975_Epitope_Rep1 1318.5863525968596 1318.58524993586 40.737 2 0.23884562868648837 0.00039635354736424893 0.00039083283567610284 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 118281 22353 TYLPREILNLI True PC9_epitope_Rep2 1343.7812869718698 1343.78018993586 91.47 2 0.23883094010682546 0.00039635354736424893 0.0003909646889989164 ['ENSG00000163428|ENST00000295628|LRRC58'] 137777 6601 YEQAARVAIE True H1975_Epitope_Rep2 1148.5825871653199 1148.5814899358602 30.301 2 0.2387979358594269 0.00039635354736424893 0.0003912611172907595 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 73872 6315 NASTDYDLSDK True NCI_RA007_Epitope_Rep1 1227.52552578167 1227.52442993586 28.589 2 0.23877505569579152 0.00039635354736424893 0.0003914667482218198 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF', 'ENST00000474162.1_1_5:60686735-60687614:-|nuORF'] 23875 12279 EYIQKNVQL True PC9_epitope_Rep5 1133.6080736371698 1133.6069699358602 52.219 2 0.23877360694602073 0.00039635354736424893 0.0003914797722213356 ['ENSG00000126067|ENST00000373237|PSMB2'] 97176 9737 SDVEAIFSK True H1975_Epitope_Rep3 994.49712620586 994.49602993586 42.476 2 0.23874147365171325 0.00039635354736424893 0.00039176875649721553 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 33567 10438 GLESDVAELR True NCI_RA007_Epitope_Rep2 1087.5509526838698 1087.54984993586 45.193 2 0.23873155975902283 0.00039635354736424893 0.0003918579582656158 ['ENSG00000176619|ENST00000325327|LMNB2'] 137424 7810 YEDATKITV True H1975_Epitope_Rep2 1038.5233409537 1038.5222499358601 34.988 2 0.23872163236206997 0.00039635354736424893 0.00039194730195335817 ['ENSG00000132383|ENST00000254719|RPA1'] 7489 11445 ASDFITKMDY True H1975_Epitope_Rep2 1189.53252573841 1189.5314299358602 49.075 2 0.23871772037834907 0.00039635354736424893 0.00039198251428166557 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'ENST00000373807.5_1_9:124074589-124093809:+|nuORF'] 55040 8035 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 37.597 2 0.23870582909169727 0.00039635354736424893 0.000392089568945788 ['ENSG00000143546|ENST00000368733|S100A8'] 79994 18465 PFAKPLPTF True PC9_epitope_Rep1 1016.5695033004799 1016.56840993586 75.816 2 0.2386356587640507 0.00039635354736424893 0.00039272189449220975 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 70985 16873 LYHDIFSRL True PC9_epitope_Rep4 1162.61349337078 1162.6118549037901 72.883 3 0.23858057124264853 0.00039635354736424893 0.00039321902099892183 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 71883 12095 M[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep1 1214.5641606002998 1214.56306993586 51.035 2 0.2385768929346928 0.00039635354736424893 0.00039325223763639593 ['CON__P02769'] 95112 11549 RVDPIGPLSY True H1975_Epitope_Rep2 1115.59750895347 1115.59640993586 49.485 2 0.2385766710876895 0.00039635354736424893 0.000393254241096293 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 130630 5893 VSSTSEIGTRY True H1975_Epitope_Rep2 1198.5829810881398 1198.58188993586 27.653 2 0.23856475082443485 0.00039635354736424893 0.0003933619058781433 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 21489 7814 ERLKEAYSV True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 35.001 2 0.23856018416225402 0.00039635354736424893 0.00039340316017253416 ['ENSG00000174231|ENST00000304992|PRPF8'] 7166 5272 AQYEDIAQKS True NCI_RA007_Epitope_Rep5 1151.5458673034298 1151.5447699358601 26.975 2 0.2385585734296897 0.00039635354736424893 0.0003934177122371039 ['ENSG00000167768|ENST00000252244|KRT1'] 1472 11196 AEEIAGKWLQA True H1975_Epitope_Rep2 1214.62953735774 1214.62844993586 48.104 2 0.2385550467846757 0.00039635354736424893 0.0003934495753803348 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 44221 5218 IKIIAPPERK True NCI_RA007_Epitope_Rep4 1163.73902823707 1163.7373949037901 26.605 3 0.2385108719889141 0.00039635354736424893 0.0003938489128128663 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 34105 7816 GM[Oxidation]DVELTVEER True H1975_Epitope_Rep1 1292.59183190012 1292.59072993586 35.019 2 0.23849564033906118 0.00039635354736424893 0.0003939867002206393 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 45406 7457 IQEVADELQK True NCI_RA007_Epitope_Rep1 1171.6084675599898 1171.60736993586 33.002 2 0.2384774808466211 0.00039635354736424893 0.000394151036442671 ['ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 71639 11077 M[Oxidation]DVAASEFFR True H1975_Epitope_Rep3 1187.5281094447498 1187.5270099358602 47.701 2 0.238472478239949 0.00039635354736424893 0.0003941963201313578 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'ENO1|p.S254Y|1|0.15|ENSG00000074800|chr1:8865389-8865389|G/T|missense_variant'] 130793 6120 VTAKELSLVNK True NCI_RA007_Epitope_Rep3 1200.70778767844 1200.7061549037899 31.062 3 0.23844271084317545 0.00039635354736424893 0.0003944658830869059 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1'] 116269 12039 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.4974899358601 51.387 2 0.23842839055445778 0.00039635354736424893 0.0003945956283859925 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 106133 7950 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58028490379 35.549 3 0.23840538845835751 0.00039635354736424893 0.00039480412257144503 ['ENSG00000168090|ENST00000303904|COPS6'] 95242 15121 RVLQALEGLK True PC9_epitope_Rep3 1125.6869926642098 1125.6853349037901 63.299 3 0.23836461729981706 0.00039635354736424893 0.0003951739495335405 ['ENSG00000105372|ENST00000598742|RPS19'] 18379 12759 EITALAPSTMK True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 54.084 2 0.23835155139277528 0.00039635354736424893 0.00039529254124677835 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 9942 19816 AYMPHTFFI True PC9_epitope_Rep4 1125.53173789277 1125.53064993586 84.35 2 0.23834666633961316 0.00039635354736424893 0.0003953368892282254 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 71368 19491 LYRLQFNEF True PC9_epitope_Rep4 1228.6240580544797 1228.62296993586 83.088 2 0.23834279588849067 0.00039635354736424893 0.0003953720298905304 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 94716 6055 RSDTPLIYK True NCI_RA007_Epitope_Rep2 1091.5975089534697 1091.59640993586 28.157 2 0.23834239359259593 0.00039635354736424893 0.00039537568260165034 ['ENSG00000196305|ENST00000443024|IARS1'] 49228 11263 KEPEYVPWTA True H1975_Epitope_Rep2 1218.5920892198596 1218.59098993586 48.367 2 0.23833331968509128 0.00039635354736424893 0.0003954580796153219 ['ENSG00000069248|ENST00000261396|NUP133'] 127310 12027 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1313.6325745132897 1313.6314699358602 51.272 2 0.2383235199111581 0.00039635354736424893 0.00039554708731591903 ['CON__P02769'] 133688 19101 VYAQVARLF True PC9_epitope_Rep2 1065.5971150306498 1065.5960099358601 78.843 2 0.23832160106741082 0.00039635354736424893 0.0003955645178120163 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 20830 8572 EQISDIDDAVR True H1975_Epitope_Rep1 1259.59935942827 1259.5982699358601 37.899 2 0.2383131407910748 0.00039635354736424893 0.00039564137891264677 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 118538 8100 TYQEVAQKF True NCI_RA007_Epitope_Rep5 1112.5502244078798 1112.54912993586 37.845 2 0.23830655666608097 0.00039635354736424893 0.00039570120565631146 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 33134 6399 GISQEQM[Oxidation]QEFR True NCI_RA007_Epitope_Rep1 1367.6139643270296 1367.61286993586 28.916 2 0.23828314445655105 0.00039635354736424893 0.00039591401453253656 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 133499 21335 VWFRIPNQF True PC9_epitope_Rep5 1205.6345631685297 1205.6334699358601 87.123 2 0.23827041334646215 0.00039635354736424893 0.0003960297840931434 ['ENSG00000013583|ENST00000014930|HEBP1'] 92857 12035 RPFEDQTSL True PC9_epitope_Rep3 1091.52473793603 1091.52364993586 51.327 2 0.23826334354842743 0.00039635354736424893 0.0003960940875257024 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 12412 8123 DITSDTSGDFR True H1975_Epitope_Rep3 1212.5258601348398 1212.5247699358601 36.222 2 0.23825924525479283 0.00039635354736424893 0.00039613136839926685 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 18345 6651 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.6049299358601 30.535 2 0.23825403895827768 0.00039635354736424893 0.0003961787334979864 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 108694 8448 SYRDSYESY True PC9_epitope_Rep2 1168.4672826295598 1168.46618993586 37.863 2 0.2382344802781513 0.00039635354736424893 0.0003963567224161694 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 69901 12359 LVILEGELER True NCI_RA007_Epitope_Rep1 1169.6655885132898 1169.66448993586 52.047 2 0.23822011457582945 0.00039635354736424893 0.00039648750501464366 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 8830 7682 AVEEYVYEM[Oxidation]R True H1975_Epitope_Rep1 1303.5754535599897 1303.57434993586 34.515 2 0.23818388464152368 0.00039635354736424893 0.00039681752764660576 ['ENSG00000170606|ENST00000304858|HSPA4', 'HSPA4|p.K697Nfs*6|1|0.33|ENSG00000170606|chr5:133101809-133101809|A/-|frameshift_variant'] 49535 9393 KFIDTTSKF True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 43.738 2 0.23816623223905228 0.00039635354736424893 0.00039697842522040894 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 27923 8367 FQEENTEKL True PC9_epitope_Rep5 1136.5349682665599 1136.5338699358601 37.127 2 0.23815427706337527 0.00039635354736424893 0.0003970874310504037 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 77364 7844 NSELLNDRY True H1975_Epitope_Rep2 1122.53055159246 1122.5294499358602 35.121 2 0.2381402836847856 0.00039635354736424893 0.0003972150591015428 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14'] 10113 8165 AYVEKVERL True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 36.763 2 0.23813769243624683 0.00039635354736424893 0.0003972386973653382 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 17244 14426 EHAFAVQQL True PC9_epitope_Rep1 1041.5243440132099 1041.5232499358601 60.313 2 0.23813678709461136 0.00039635354736424893 0.00039724695653689784 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 30234 19947 FYTVIPHNF True PC9_epitope_Rep5 1136.5654805492 1136.5643899358602 81.781 2 0.2381203488572026 0.00039635354736424893 0.0003973969478109562 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 55051 20526 KYSPFVVSF True PC9_epitope_Rep5 1072.5593325396 1072.55822993586 83.995 2 0.2381112652866858 0.00039635354736424893 0.00039747985553460183 ['ENSG00000086544|ENST00000263370|ITPKC'] 77360 5340 NSELGSETRY True H1975_Epitope_Rep2 1154.52038083158 1154.5192899358601 25.59 2 0.23809774801889835 0.00039635354736424893 0.00039760326269601225 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF'] 111947 17160 TIQEEFYRV True PC9_epitope_Rep1 1183.5873381925899 1183.58624993586 70.827 2 0.23807558725777858 0.00039635354736424893 0.00039780566459169184 ['ENSG00000076003|ENST00000264156|MCM6'] 137165 9764 YAYDGKDYL True NCI_RA007_Epitope_Rep2 1106.4920408254197 1106.49094993586 42.6 2 0.23807445306937408 0.00039635354736424893 0.0003978160263061244 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 100898 7272 SLEVENQSLR True NCI_RA007_Epitope_Rep2 1173.59896550545 1173.5978699358602 32.907 2 0.2380705874310292 0.00039635354736424893 0.00039785134402498315 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF', 'ENST00000527741.5_1_8:144663279-144663534:-|nuORF'] 98685 5599 SGEGEVSGLM[Oxidation]R True NCI_RA007_Epitope_Rep1 1136.5131876566 1136.51208993586 25.844 2 0.23805927117472886 0.00039635354736424893 0.00039795475107246264 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 1383 5681 AEEEAATRIPA True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 26.85 2 0.23805576563852643 0.00039635354736424893 0.0003979867898513076 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 57316 7130 LEAANGELEVK True H1975_Epitope_Rep3 1171.6084675599898 1171.60736993586 32.398 2 0.23805315511715888 0.00039635354736424893 0.00039801065034041885 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 95271 10460 RVPELLHRL True PC9_epitope_Rep4 1131.68766137055 1131.68602490379 47.945 3 0.23805228238122433 0.00039635354736424893 0.00039801862757513366 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 107669 5230 SVQSDQGYISR True NCI_RA007_Epitope_Rep4 1238.58912909774 1238.58802993586 26.655 2 0.2380387432492003 0.00039635354736424893 0.00039814240242926063 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 71309 19784 LYQEVFGRL True PC9_epitope_Rep3 1123.6025943339098 1123.6014899358602 81.329 2 0.23802213947714657 0.00039635354736424893 0.00039829424695299575 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 134234 15033 VYMELSQKL True PC9_epitope_Rep4 1109.57908200801 1109.5779899358602 65.757 2 0.23801847556375655 0.00039635354736424893 0.00039832776193139143 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 12948 19142 DLLDLLVEAK True H1975_Epitope_Rep1 1127.64379043955 1127.64268993586 79.777 2 0.23799723388064015 0.00039635354736424893 0.00039852212209196604 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 96041 21813 RYLPTGSFPFL True PC9_epitope_Rep3 1296.6866583110398 1296.68556993586 89.202 2 0.23798936704335077 0.00039635354736424893 0.0003985941273290168 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 26823 20272 FLASESLIKQI True PC9_epitope_Rep1 1247.71253870571 1247.7114499358602 82.803 2 0.23798928444485237 0.00039635354736424893 0.0003985948834230837 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 14380 8403 DTDAQQAFKY True H1975_Epitope_Rep1 1185.5302172392899 1185.52912993586 37.25 2 0.23798410398798003 0.00039635354736424893 0.00039864230741044486 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 48876 2763 KEAPAPPKA True H1975_Epitope_Rep2 907.5127167003499 907.51160993586 14.656 2 0.237981256554594 0.00039635354736424893 0.00039866837637195636 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF', 'ENST00000399247.6_1_6:29694709-29694913:-|nuORF', 'ENST00000606975.1_1_8:163470-182153:-|nuORF'] 133759 16685 VYEGPELNHAF True PC9_epitope_Rep5 1274.59315184902 1274.5920499358601 69.182 2 0.2379741404723571 0.00039635354736424893 0.00039873353335292136 ['ENSG00000123384|ENST00000243077|LRP1'] 47893 7836 IYIKHPHLF True NCI_RA007_Epitope_Rep3 1166.66004964038 1166.6584049037901 37.946 3 0.23796122471185013 0.00039635354736424893 0.0003988518212133299 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 78025 4510 NVSDAVAQSTR True H1975_Epitope_Rep3 1146.5629143499002 1146.56180993586 22.467 2 0.2379494057533196 0.00039635354736424893 0.0003989600949491913 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 140892 5309 YSEEECRQY True H1975_Epitope_Rep2 1205.46590273057 1205.46480993586 25.472 2 0.23792030893795812 0.00039635354736424893 0.0003992267771525438 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 120041 11942 VDSLLENLEK True H1975_Epitope_Rep1 1158.61321858726 1158.6121299358601 50.94 2 0.2379115841360836 0.00039635354736424893 0.00039930677776706754 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 55426 19915 LAFEEEFGRV True PC9_epitope_Rep3 1195.5873381925899 1195.58624993586 81.844 2 0.23788789370901992 0.00039635354736424893 0.0003995240842996849 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF', 'EIF3I|p.K282N|1|0.28|ENSG00000084623|chr1:32230969-32230969|G/C|missense_variant'] 16561 9414 EELSNVLAAM[Oxidation]R True H1975_Epitope_Rep1 1247.6179870783099 1247.6168899358602 41.124 2 0.23788580785171956 0.00039635354736424893 0.00039954322304273904 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 38906 19067 HHFEWIQKL True PC9_epitope_Rep3 1236.64037682496 1236.63874490379 78.564 3 0.23787374023941066 0.00039635354736424893 0.00039965396723593396 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 35669 7041 GTEDELDKY True H1975_Epitope_Rep2 1068.46113461996 1068.4600299358601 32.008 2 0.2378687322723131 0.00039635354736424893 0.00039969993427087133 ['nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 73719 19308 MYSFVNDKF True PC9_epitope_Rep5 1149.5164817514499 1149.5153899358602 79.313 2 0.23786053121827974 0.00039635354736424893 0.0003997752214054793 ['ENSG00000163874|ENST00000373087|ZC3H12A', 'ZC3H12B|p.V574Gfs*7|1|0.22|ENSG00000102053|chrX:65502412-65502413|-/G|frameshift_variant', 'nc|ENSG00000102053|Q5HYM0-2|ZC3H12B', 'ENSG00000102053|ENST00000338957|ZC3H12B', 'ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 53322 19442 KQMEQISQFL True PC9_epitope_Rep1 1250.6329084860197 1250.63180993586 79.598 2 0.23785531762135892 0.00039635354736424893 0.00039982309054772546 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 89186 6971 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 32.209 2 0.2378470267704213 0.00039635354736424893 0.0003998992256350098 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 72928 15202 MPWGDPNYRSA True PC9_epitope_Rep3 1292.5608061749201 1292.5597099358602 63.619 2 0.23783790840482366 0.00039635354736424893 0.0003999829766008736 ['ENSG00000124226|ENST00000244061|RNF114'] 4823 9151 ALEEQLQQIR True NCI_RA007_Epitope_Rep4 1226.6619001151798 1226.66080993586 42.04 2 0.2378281827214653 0.00039635354736424893 0.000400072325088636 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 103173 10979 SPIENIQRVA True PC9_epitope_Rep6 1125.6142216467701 1125.6131299358601 53.123 2 0.2378257816398301 0.00039635354736424893 0.0004000943865696164 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 137184 8812 YAYDGKDYLA True NCI_RA007_Epitope_Rep4 1177.5291546101298 1177.52804993586 40.705 2 0.23781699553530786 0.00039635354736424893 0.0004001751249551963 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 74529 21639 NFLSRSFYW True PC9_epitope_Rep1 1218.5821932425 1218.58108993586 88.062 2 0.23777674912952595 0.00039635354736424893 0.00040054517125960424 ['ENSG00000104442|ENST00000276569|ARMC1', 'nc|ENSG00000104442|Q9NVT9-2|ARMC1'] 86626 4959 QLETLGQEK True NCI_RA007_Epitope_Rep5 1044.5451390274397 1044.5440499358601 25.776 2 0.2377521768211473 0.00039635354736424893 0.0004007712705186676 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 22422 11681 ETEQTKFWDY True H1975_Epitope_Rep2 1345.5826467349698 1345.58154993586 50.003 2 0.2377463225140437 0.00039635354736424893 0.0004008251571296889 ['ENSG00000196968|ENST00000372841|FUT11'] 43212 20156 IFIQNSKLYF True PC9_epitope_Rep2 1271.69140933831 1271.6903099358601 82.942 2 0.23772170625147168 0.00039635354736424893 0.00040105181975029817 ['SLC35A5|p.Y300Mfs*8|1|0.19|ENSG00000138459|chr3:112581009-112581009|T/-|frameshift_variant', 'ENSG00000138459|ENST00000492406|SLC35A5'] 115806 5342 TSDNGKDGLAY True H1975_Epitope_Rep2 1139.50948179471 1139.5083899358601 25.597 2 0.23769522203496496 0.00039635354736424893 0.00040129582576165597 ['nc|ENSG00000105325|Q9UM11-3|FZR1', 'ENSG00000105325|ENST00000441788|FZR1', 'nc|ENSG00000105325|Q9UM11|FZR1'] 1938 10741 AEIMKTLEV True H1975_Epitope_Rep3 1032.5525329069999 1032.5514299358601 46.395 2 0.2376833065642155 0.00039635354736424893 0.0004014056546712871 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 133521 20269 VWMRSPLSTF True PC9_epitope_Rep2 1222.61686449906 1222.61576993586 83.386 2 0.2376770707137517 0.00039635354736424893 0.0004014631446240593 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 76789 14077 NRAEYYHLL True PC9_epitope_Rep5 1177.58800689893 1177.58635490379 59.161 3 0.23766268542221633 0.00039635354736424893 0.000401595797929714 ['ENSG00000100393|ENST00000263253|EP300'] 29735 19855 FVNDIFERI True PC9_epitope_Rep4 1151.59750895347 1151.59640993586 84.502 2 0.23765165631544016 0.00039635354736424893 0.00040169753210609173 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 142354 8096 YYEHVKARF True PC9_epitope_Rep1 1211.60874234351 1211.60710490379 35.967 3 0.23764966224570244 0.00039635354736424893 0.00040171592847102795 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 26941 9904 FLDQNLQKY True H1975_Epitope_Rep2 1167.59242357303 1167.5913299358601 43.084 2 0.23763352574239865 0.00039635354736424893 0.0004018648274766444 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 106788 19205 SVADYFKQI True PC9_epitope_Rep4 1069.54441075145 1069.5433099358602 81.972 2 0.23761289118542098 0.00039635354736424893 0.00040205531276862384 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 142383 15569 YYEKQFPEI True PC9_epitope_Rep4 1215.5811901829898 1215.58008993586 67.807 2 0.23761205973246768 0.00039635354736424893 0.0004020629901187928 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 90577 8609 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 38.071 2 0.23760021435535592 0.00039635354736424893 0.0004021723822220758 ['ENSG00000026025|ENST00000544301|VIM'] 38406 4243 HEMQIQHPTA True H1975_Epitope_Rep3 1190.55024149122 1190.5491499358602 21.438 2 0.2375873330349482 0.00039635354736424893 0.00040229137514951534 ['ENSG00000146731|ENST00000275603|CCT6A'] 76980 20266 NRFNYPFEL True PC9_epitope_Rep2 1198.5771078620598 1198.5760099358602 83.373 2 0.2375772645223257 0.00039635354736424893 0.0004023844089754668 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 141256 5079 YTDHQNSSSYY True H1975_Epitope_Rep1 1363.5316737912701 1363.53056993586 24.608 2 0.23757123434691052 0.00039635354736424893 0.0004024401385894306 ['ENSG00000125398|ENST00000245479|SOX9'] 89563 19885 QYMERLQLL True PC9_epitope_Rep5 1192.62742918276 1192.6263299358602 81.54 2 0.23756408935033155 0.00039635354736424893 0.0004025061811674211 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 63509 9142 LLYESPERY True H1975_Epitope_Rep2 1168.57643915572 1168.57534993586 40.116 2 0.2375609670724195 0.00039635354736424893 0.0004025350443958698 ['nc|ENSG00000168394|Q03518-2|TAP1', 'ENSG00000168394|ENST00000354258|TAP1'] 106945 7779 SVDYGQTHYY True H1975_Epitope_Rep3 1231.51456717515 1231.51346993586 34.906 2 0.2375551254155052 0.00039635354736424893 0.00040258905191593213 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A', 'ENST00000557013.1_1_14:55168817-55201659:+|nuORF', 'ENST00000555112.1_1_14:55034634-55169324:+|nuORF'] 130063 4235 VSDEEM[Oxidation]M[Oxidation]ELR True H1975_Epitope_Rep3 1269.5217041154099 1269.5206099358602 21.408 2 0.23751789512483445 0.00039635354736424893 0.0004029334256971174 ['ENSG00000136167|ENST00000323076|LCP1', 'ENST00000460190.1_1_13:46733728-46733797:-|nuORF', 'LCP1|p.K220Sfs*29|1|0.26|ENSG00000136167|chr13:46152860-46152860|T/-|frameshift_variant'] 105593 9405 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep3 1071.45427579815 1071.4531699358602 41.177 2 0.23751536445850974 0.00039635354736424893 0.00040295684464681847 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 118002 11552 TYDSVTDKF True PC9_epitope_Rep4 1074.48695544498 1074.4858499358602 52.195 2 0.23751090656785892 0.00039635354736424893 0.00040299810157573904 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 132458 10112 VVDEDHELIY True H1975_Epitope_Rep2 1230.5768330785402 1230.5757299358602 43.892 2 0.23750764793434903 0.00039635354736424893 0.0004030282622887145 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 95882 7817 RYLDKTEQW True NCI_RA007_Epitope_Rep2 1237.6091362663299 1237.60802993586 35.035 2 0.23750332962307713 0.00039635354736424893 0.00040306823447744226 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 30130 21056 FYNLLTRTF True PC9_epitope_Rep1 1173.61824439805 1173.6171499358602 85.822 2 0.23749441096761253 0.00039635354736424893 0.0004031508020631734 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 2452 8924 AEQKSNYFEV True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 39.288 2 0.23748064578684006 0.00039635354736424893 0.00040327827135903406 ['ENSG00000163840|ENST00000296161|DTX3L'] 58343 7715 LENDQIESLR True H1975_Epitope_Rep1 1215.60953018915 1215.6084299358602 34.638 2 0.23746994595347226 0.00039635354736424893 0.0004033773826330119 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF'] 57334 7850 LEAEIATYR True H1975_Epitope_Rep1 1064.55022440788 1064.54912993586 35.147 2 0.2374368121506328 0.00039635354736424893 0.0004036844520749926 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 49090 7729 KEIEGIFHA True H1975_Epitope_Rep3 1042.54474510462 1042.54364993586 34.712 2 0.2374301169334354 0.00039635354736424893 0.00040374652885870376 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 73497 11936 MVDPLLTKY True H1975_Epitope_Rep3 1078.57326835158 1078.57216993586 51.067 2 0.23742035297920694 0.00039635354736424893 0.0004038370755538924 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 137928 14247 YFDEFGIIR True H1975_Epitope_Rep3 1158.5709598524597 1158.5698699358602 60.142 2 0.23740130862933703 0.00039635354736424893 0.000404013743242515 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 42257 12140 IDTIEIITDR True H1975_Epitope_Rep1 1187.63976768827 1187.6386699358602 51.713 2 0.23738380253111713 0.00039635354736424893 0.0004041762094968322 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105654 12086 SSEELLSLKY True H1975_Epitope_Rep3 1167.60231955039 1167.6012299358601 51.654 2 0.23736125487872753 0.00039635354736424893 0.0004043855607169311 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 111098 13473 THDYPYSL True PC9_epitope_Rep1 994.43961132974 994.43850993586 56.681 2 0.23733798780402088 0.00039635354736424893 0.000404601705682575 ['ENSG00000119777|ENST00000238788|TMEM214'] 48091 10622 IYNGDMEKI True PC9_epitope_Rep4 1081.51139637101 1081.51028993586 48.607 2 0.23733739826377107 0.00039635354736424893 0.00040460718386048025 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 57584 9422 LEDVRNGIYP True H1975_Epitope_Rep2 1174.59823722946 1174.5971499358602 41.21 2 0.23733367521787416 0.00039635354736424893 0.0004046417811944319 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2', 'ENST00000486701.1_1_2:27663393-27664286:+|nuORF', 'nc|ENSG00000185189|Q9NSY0-2|NRBP2', 'ENST00000423469.6_1_8:144917834-144920143:-|nuORF', 'nc|ENSG00000185189|Q9NSY0-4|NRBP2', 'ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 88038 13938 QRQDIAFAY True PC9_epitope_Rep2 1110.5458077337798 1110.54470993586 58.892 2 0.23732098497000464 0.00039635354736424893 0.00040475973078907854 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 55069 15967 KYTKIFNDF True PC9_epitope_Rep5 1174.60225998074 1174.60116993586 66.406 2 0.2373105762769525 0.00039635354736424893 0.0004048565001994481 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 111425 13812 THSNTIVVSL True PC9_epitope_Rep2 1069.57677350889 1069.57566993586 58.411 2 0.2373021949156726 0.00039635354736424893 0.00040493443841290263 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 85385 4891 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 23.897 2 0.23730056773793845 0.00039635354736424893 0.0004049495712703926 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 48110 15139 IYNQVKQII True PC9_epitope_Rep1 1117.64954452633 1117.64844993586 63.054 2 0.23729924862966545 0.00039635354736424893 0.00040496183947841887 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 93720 12683 RQYFQEIGL True NCI_RA007_Epitope_Rep4 1152.5927579262 1152.5916699358602 55.83 2 0.23729492936117758 0.00039635354736424893 0.00040500201292503036 ['ENSG00000110328|ENST00000227756|GALNT18'] 106965 9806 SVEEISTLVQK True NCI_RA007_Epitope_Rep5 1231.6659824361097 1231.6648899358602 44.366 2 0.23728154147296615 0.00039635354736424893 0.00040512655885686466 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 71534 7282 MADKNIQYY True H1975_Epitope_Rep2 1144.52229540788 1144.52118993586 32.948 2 0.23727386633556513 0.00039635354736424893 0.0004051979770714953 ['ENSG00000148158|ENST00000374232|SNX30', 'ENST00000604751.1_1_9:115618996-115637523:+|nuORF'] 35388 6613 GSDDTELRY True H1975_Epitope_Rep2 1054.45671794586 1054.45562993586 30.345 2 0.23727271852427217 0.00039635354736424893 0.0004052086586997012 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'ENST00000487284.2_1_7:101917466-101926379:+|nuORF'] 68435 2723 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 14.565 2 0.23725983031182876 0.00039635354736424893 0.0004053286168784739 ['ENSG00000124570|ENST00000380539|SERPINB6'] 108232 21798 SYIDLLQRF True PC9_epitope_Rep3 1153.6131590176099 1153.61206993586 89.144 2 0.23724796958893116 0.00039635354736424893 0.00040543904308096144 ['ENSG00000127580|ENST00000293883|WDR24'] 116345 7952 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 35.536 2 0.23724373682610325 0.00039635354736424893 0.00040547845843345013 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 65111 19553 LQMEPAAFQAL True PC9_epitope_Rep6 1217.61144476545 1217.61034993586 87.873 2 0.23722832269924915 0.00039635354736424893 0.000405622026777129 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 116759 17273 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 71.732 2 0.23722102496162092 0.00039635354736424893 0.00040569001624085897 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 73387 8462 MTEVLPNQRY True H1975_Epitope_Rep2 1249.6125073946098 1249.6114099358601 37.503 2 0.23720476169674407 0.00039635354736424893 0.0004058415742760099 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'SLC35E4-SEC14L2|2|fusion', 'SLC35E4-SEC14L2|3|fusion', 'SLC35E4-SEC14L2|1|fusion', 'ENST00000454552.5_3_22:30812232-30824714:+|nuORF'] 38877 12990 HHEFLQQSL True PC9_epitope_Rep1 1137.55670677065 1137.55560993586 54.837 2 0.23719738420842446 0.00039635354736424893 0.0004059103441165311 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23', 'MED23|p.H779Pfs*26|1|0.22|ENSG00000112282|chr6:131598646-131598647|-/G|frameshift_variant'] 41269 6439 HVLVTLGEK True PC9_epitope_Rep6 994.58113061334 994.58002993586 33.395 2 0.2371598083941544 0.00039635354736424893 0.0004062607914579908 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 22370 15013 ETEEDKFLLL True H1975_Epitope_Rep2 1235.6285342982299 1235.6274299358602 62.899 2 0.2371591981251785 0.00039635354736424893 0.00040626648557865684 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 3584 9216 AGNEDIITLR True H1975_Epitope_Rep3 1100.5825871653199 1100.5814899358602 40.441 2 0.23715391392242882 0.00039635354736424893 0.0004063157932318563 ['ENSG00000132646|ENST00000379143|PCNA'] 12540 17897 DKLNNLVLFDK True PC9_epitope_Rep5 1317.7292513990099 1317.72760490379 73.859 3 0.23715329344498898 0.00039635354736424893 0.00040632158338955624 ['ENSG00000118181|ENST00000527673|RPS25'] 22356 6245 ETDSSEEISRY True H1975_Epitope_Rep3 1314.5575541859398 1314.5564499358602 29.033 2 0.23712128406355848 0.00039635354736424893 0.000406620400122442 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF'] 113817 5950 TNEAQAIETAR True NCI_RA007_Epitope_Rep1 1202.58912909774 1202.58802993586 27.191 2 0.23709499165603537 0.00039635354736424893 0.00040686601214857433 ['EEA1-UBE2N|1|fusion', 'ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL', 'EEA1-UBE2N|2|fusion'] 134841 18769 VYVDLGGSHVF True PC9_epitope_Rep4 1191.5924235730301 1191.5913299358601 80.278 2 0.2370848318622953 0.00039635354736424893 0.00040696096029795096 ['ENSG00000165733|ENST00000374518|BMS1'] 95033 3039 RTSEIYVHR True NCI_RA007_Epitope_Rep2 1159.6098049726697 1159.60816490379 16.405 3 0.23706838955103973 0.00039635354736424893 0.0004071146686806256 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 84653 19497 QDGQFSVLFTK True PC9_epitope_Rep1 1268.6401020414398 1268.63900993586 79.814 2 0.2370399783920208 0.00039635354736424893 0.0004073804032263516 ['CON__P12763'] 98029 11234 SEQGINEFLR True NCI_RA007_Epitope_Rep1 1191.58840082175 1191.58730993586 47.697 2 0.23703165906308646 0.00039635354736424893 0.00040745824829286096 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 14907 16949 DYAYLREHF True PC9_epitope_Rep1 1212.5563724174797 1212.55471490379 70.018 3 0.23701684589914251 0.00039635354736424893 0.0004075968939741604 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 142360 8017 YYEHVKARF True PC9_epitope_Rep5 1211.60874234351 1211.60710490379 35.775 3 0.23698352421342128 0.00039635354736424893 0.0004079089454768293 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 98253 10480 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 45.329 2 0.23697549903322748 0.00039635354736424893 0.00040798413562317807 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 48312 10751 IYQYIQSRF True NCI_RA007_Epitope_Rep3 1216.6240580544797 1216.62296993586 49.335 2 0.23697205439897198 0.00039635354736424893 0.00040801641362412874 ['nc|ENSG00000105204|Q9Y463-2|DYRK1B', 'nc|ENSG00000105204|Q9Y463-3|DYRK1B', 'ENSG00000105204|ENST00000323039|DYRK1B', 'nc|ENSG00000157540|Q13627-4|DYRK1A', 'nc|ENSG00000157540|Q13627-3|DYRK1A', 'nc|ENSG00000157540|Q13627-5|DYRK1A', 'DYRK1A|p.S645Ifs*30|1|0.1|ENSG00000157540|chr21:37512171-37512172|-/A|frameshift_variant', 'DYRK1A|p.S671Lfs*32|1|0.16|ENSG00000157540|chr21:37512248-37512248|C/-|frameshift_variant', 'ENSG00000157540|ENST00000647188|DYRK1A', 'nc|ENSG00000157540|Q13627|DYRK1A'] 88605 12992 QTDQMVFNAY True H1975_Epitope_Rep2 1215.52302368387 1215.52192993586 55.091 2 0.2369537454406251 0.00039635354736424893 0.0004081880210094281 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 48941 7621 KEEELQAALAR True PC9_epitope_Rep4 1256.67246479888 1256.6708249037902 36.695 3 0.236949338120147 0.00039635354736424893 0.00040822934103694063 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 137498 6202 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 28.925 2 0.2369021070875004 0.00039635354736424893 0.000408672410429354 ['ENSG00000127184|ENST00000247655|COX7C'] 119744 15319 VAYEEFEKV True PC9_epitope_Rep1 1112.5389910178399 1112.5378899358602 63.744 2 0.23689409658734908 0.00039635354736424893 0.0004087476039228731 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 8019 15300 ATDLDVANFY True H1975_Epitope_Rep3 1127.51350454599 1127.5124099358602 64.262 2 0.2368926120198308 0.00039635354736424893 0.00040876154088378074 ['ENSG00000142252|ENST00000270257|GEMIN7'] 10142 11075 AYVHMVTHF True PC9_epitope_Rep6 1103.52223583823 1103.52112993586 53.518 2 0.2368905824044097 0.00039635354736424893 0.00040878059546732413 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 54636 10994 KYLEHPLLL True NCI_RA007_Epitope_Rep4 1124.65938093404 1124.65828993586 49.155 2 0.2368820137708298 0.00039635354736424893 0.0004088610499592484 ['ENSG00000114999|ENST00000233336|TTL'] 95423 15514 RWFQPAIPSW True NCI_RA007_Epitope_Rep3 1286.6560268890996 1286.65492993586 68.584 2 0.23687850127820398 0.00039635354736424893 0.0004088940348143654 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 118701 19354 TYTDVTPRQFF True PC9_epitope_Rep2 1373.6615657620098 1373.6604699358602 79.821 2 0.23687504735846857 0.00039635354736424893 0.00040892647223030244 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 4618 8191 ALAAAGYDVEK True PC9_epitope_Rep6 1106.56078909158 1106.5596899358602 41.071 2 0.23687463398740785 0.00039635354736424893 0.00040893035456902773 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 95034 3549 RTSEIYVHR True NCI_RA007_Epitope_Rep2 1159.6098049726697 1159.60816490379 18.456 3 0.2368708308810873 0.00039635354736424893 0.00040896607468944666 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 17978 4799 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 23.549 2 0.2368461247980866 0.00039635354736424893 0.0004091981991809033 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 26869 7824 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.56622993586 35.044 2 0.23682509830560253 0.00039635354736424893 0.0004093958563975411 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 4819 6699 ALEEPDDQNRI True NCI_RA007_Epitope_Rep3 1298.6102584651396 1298.60916993586 33.433 2 0.2368021237979107 0.00039635354736424893 0.00040961193520377493 ['nc|ENSG00000072694|P31994-5|FCGR2B', 'nc|ENSG00000072694|P31994-2|FCGR2B', 'nc|ENSG00000072694|P31994-3|FCGR2B', 'nc|ENSG00000072694|P31994-4|FCGR2B', 'ENSG00000072694|ENST00000358671|FCGR2B', 'ENST00000480308.5_1_1:161647083-161647340:+|nuORF'] 88526 6029 QTALPGNDRY True H1975_Epitope_Rep3 1133.5465360097699 1133.54542993586 28.205 2 0.23679484711485319 0.00039635354736424893 0.00040968039738688994 ['nc|ENSG00000155313|Q9UHP3|USP25', 'nc|ENSG00000155313|Q9UHP3-1|USP25', 'ENSG00000155313|ENST00000400183|USP25'] 112547 13619 TLEEDEEELFK True NCI_RA007_Epitope_Rep1 1380.6296564970396 1380.62854993586 56.986 2 0.23678931727325733 0.00039635354736424893 0.0004097324322048786 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 9842 15038 AYLESFYKF True NCI_RA007_Epitope_Rep2 1166.5648118428599 1166.56370993586 63.18 2 0.23678604586648494 0.00039635354736424893 0.0004097632186770063 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 88971 9028 QVIGVVLQK True NCI_RA007_Epitope_Rep1 982.6175161220598 982.61640993586 39.12 2 0.236782251153574 0.00039635354736424893 0.0004097989327720457 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 89004 10799 QVISQAAVVHA True PC9_epitope_Rep3 1121.61930702721 1121.61820993586 46.504 2 0.23677944647572544 0.00039635354736424893 0.00040982533111841594 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 43521 9873 IGNLNTLVVK True H1975_Epitope_Rep3 1069.64954452633 1069.64844993586 43.005 2 0.23676652431240594 0.00039635354736424893 0.00040994697986518775 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 20074 12650 EMEEKYYRF True PC9_epitope_Rep5 1293.5699738762899 1293.56833490379 53.661 3 0.23676650339856867 0.00039635354736424893 0.0004099471767765985 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 56720 11690 LDLEIATYR True H1975_Epitope_Rep1 1092.58152453616 1092.5804299358601 49.957 2 0.2367501256609239 0.00039635354736424893 0.00041010140828516534 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 42680 6676 IEIIANDQGNR True NCI_RA007_Epitope_Rep1 1241.63641364333 1241.63530993586 29.979 2 0.2367453827956759 0.00039635354736424893 0.00041014608339575364 ['HSPA8|p.V26I|1|0.12|ENSG00000109971|chr11:123061249-123061249|C/T|missense_variant'] 23966 11581 EYLTKVDKL True PC9_epitope_Rep1 1107.6175756917098 1107.61646993586 49.424 2 0.23674191396221697 0.00039635354736424893 0.000410178760937562 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 100079 4681 [Acetylation]-SIRVTQKSYK True NCI_RA007_Epitope_Rep4 1250.6982859401999 1250.69665490379 24.426 3 0.23673808322493664 0.00039635354736424893 0.00041021485076569606 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 131076 5766 VTDTDETELAR True NCI_RA007_Epitope_Rep2 1248.58337501096 1248.58226993586 27.045 2 0.2367342153566683 0.00039635354736424893 0.0004102512936407952 ['ENSG00000134001|ENST00000256383|EIF2S1'] 18380 10879 EITALAPSTMK True PC9_epitope_Rep6 1160.61111041228 1160.61000993586 52.709 2 0.2367302611474537 0.00039635354736424893 0.00041028855337324396 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 71897 5279 M[Oxidation]EQELAHAV True H1975_Epitope_Rep2 1042.4753455958999 1042.4742499358601 25.366 2 0.23672774802140462 0.00039635354736424893 0.0004103122358278134 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 12650 8977 DLDHSIGTQY True H1975_Epitope_Rep1 1147.51456717515 1147.51346993586 39.435 2 0.23672687853884075 0.00039635354736424893 0.00041032042971989914 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 105633 11292 SSDTADFRDLY True H1975_Epitope_Rep1 1288.55716026312 1288.55606993586 48.412 2 0.23671228325167123 0.00039635354736424893 0.00041045799833712773 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 57670 17648 LEEFITPIV True H1975_Epitope_Rep2 1059.58521293427 1059.5841099358602 73.203 2 0.2367093851085829 0.00039635354736424893 0.000410485320436144 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'ENST00000491510.1_1_3:25668659-25671642:-|nuORF', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 6940 16479 AQIKPFYTV True PC9_epitope_Rep3 1065.5858816406098 1065.58478993586 68.523 2 0.23670760242786987 0.00039635354736424893 0.00041050212747556974 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 77520 10779 NTDFYQTSY True H1975_Epitope_Rep3 1137.46146897313 1137.4603699358602 46.541 2 0.2366838216142458 0.00039635354736424893 0.000410726398026556 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 103151 11858 SPIENIQRV True PC9_epitope_Rep3 1054.57710786206 1054.5760099358602 50.63 2 0.23666408097120917 0.00039635354736424893 0.00041091266015120777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 134699 19392 VYTLLTTHL True PC9_epitope_Rep2 1059.5964463243101 1059.5953499358602 79.969 2 0.23666346644014233 0.00039635354736424893 0.00041091845989654356 ['nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 87947 19219 QRLINLVGESL True PC9_epitope_Rep4 1240.7139356880398 1240.71282993586 82.027 2 0.23664782761858938 0.00039635354736424893 0.00041106608166922073 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 94925 9738 RTFTWLVGK True NCI_RA007_Epitope_Rep3 1106.6236641316598 1106.6225699358602 45.372 2 0.2366377140539561 0.00039635354736424893 0.00041116157641410937 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 23490 4305 EVVEEAENGR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.5192899358601 21.385 2 0.2366218107030744 0.00039635354736424893 0.0004113117847423223 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 28282 18801 FRPEWQSVY True PC9_epitope_Rep3 1210.57710786206 1210.5760099358602 77.543 2 0.23661473835061167 0.00039635354736424893 0.00041137860131632925 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'ENST00000512755.1_1_13:33101488-33110480:-|nuORF'] 123312 8420 VGLQVVAVK True H1975_Epitope_Rep1 911.5804023373498 911.57930993586 37.315 2 0.2366114646339552 0.00039635354736424893 0.0004114095336831667 ['ENSG00000144381|ENST00000388968|HSPD1'] 71036 14238 LYIVHPTMF True NCI_RA007_Epitope_Rep4 1119.57868808519 1119.57758993586 62.048 2 0.23658044774289633 0.00039635354736424893 0.00041170271877256513 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 34169 19130 GNFNYIEFTR True PC9_epitope_Rep3 1259.5934862021898 1259.5923899358602 78.805 2 0.2365762715724993 0.00039635354736424893 0.00041174220974907915 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 115079 16364 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61225490379 68.079 3 0.2365741108869766 0.00039635354736424893 0.0004117626432567404 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 1605 13025 AEFARIMSI True NCI_RA007_Epitope_Rep5 1036.5375515491999 1036.5364499358602 56.778 2 0.23652291543639256 0.00039635354736424893 0.00041224709405709016 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 65353 9416 LRDLEDSLAR True PC9_epitope_Rep4 1186.6305999868998 1186.6289549037901 43.829 3 0.23650861945765442 0.00039635354736424893 0.00041238247570845086 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 43523 10429 IGNLNTLVVK True NCI_RA007_Epitope_Rep2 1069.64954452633 1069.64844993586 45.159 2 0.23650627575108743 0.00039635354736424893 0.00041240467465629687 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 24951 11667 FDAGELITQR True NCI_RA007_Epitope_Rep1 1148.5825871653199 1148.5814899358602 49.355 2 0.2364915240606836 0.00039635354736424893 0.0004125444261528438 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 97918 4836 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 23.691 2 0.23648897192252016 0.00039635354736424893 0.0004125686088881723 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 137660 11629 YEILTPNSIPK True NCI_RA007_Epitope_Rep2 1273.69180326113 1273.69070993586 49.826 2 0.23648276303889657 0.00039635354736424893 0.0004126274469812847 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 99831 10809 SILEDYANYK True NCI_RA007_Epitope_Rep3 1214.5819184589798 1214.58082993586 49.565 2 0.23647327465156223 0.00039635354736424893 0.00041271737934392205 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 140354 13245 YRDPTTVTTL True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 55.812 2 0.23647241631394197 0.00039635354736424893 0.0004127255157666792 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 54678 17970 KYLSVQGQLF True PC9_epitope_Rep4 1181.64445914589 1181.6433699358602 77.175 2 0.23645136719326748 0.00039635354736424893 0.0004129250966386638 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 28857 9438 FTDAGFEHY True H1975_Epitope_Rep3 1085.4454249861699 1085.4443299358602 41.305 2 0.2364471270717958 0.00039635354736424893 0.0004129653117954068 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 107839 18633 SVVELVNKL True PC9_epitope_Rep2 999.5964463243099 999.59534993586 77.037 2 0.23644028891059907 0.00039635354736424893 0.00041303017616815336 ['ENSG00000128335|ENST00000358502|APOL2'] 74308 11650 NELESYAYSLK True NCI_RA007_Epitope_Rep2 1315.62959692739 1315.6284899358602 49.908 2 0.23643269307171916 0.00039635354736424893 0.0004131022395835167 ['ENSG00000044574|ENST00000324460|HSPA5'] 61999 9667 LLDPSQKNLY True H1975_Epitope_Rep2 1189.63428838501 1189.6331899358602 42.165 2 0.2363830929504012 0.00039635354736424893 0.00041357311714096634 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 62641 11439 LLLEPYNKY True H1975_Epitope_Rep2 1151.62266107215 1151.6215699358602 49.052 2 0.23638271253062854 0.00039635354736424893 0.0004135767307265791 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 55001 17841 KYQIINEEF True PC9_epitope_Rep3 1182.5920892198599 1182.59098993586 73.821 2 0.23637713202351268 0.00039635354736424893 0.00041362974328377003 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 49094 6662 KEIENTYANVA True NCI_RA007_Epitope_Rep4 1250.61428121642 1250.6131899358602 32.248 2 0.23636040481386683 0.00039635354736424893 0.000413788685838416 ['ENSG00000155962|ENST00000369449|CLIC2'] 68030 9227 LTDITKGVQY True H1975_Epitope_Rep3 1136.607739284 1136.60664993586 40.483 2 0.23634957564067513 0.00039635354736424893 0.00041389161770382185 ['ENSG00000167658|ENST00000309311|EEF2'] 14355 4488 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 23.734 2 0.2363398655329265 0.00039635354736424893 0.0004139839346319988 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 54527 19968 KYIESPVLF True PC9_epitope_Rep1 1094.60119735158 1094.60010993586 81.631 2 0.23633288654856527 0.00039635354736424893 0.00041405029870180066 ['ENSG00000100304|ENST00000216129|TTLL12'] 46199 21878 ISMPDFDLHL True PC9_epitope_Rep5 1186.5692456003 1186.5681499358602 89.191 2 0.23631970372843192 0.00039635354736424893 0.0004141756849703261 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 132578 14898 VVEQLKDWLY True H1975_Epitope_Rep2 1291.68123857743 1291.68014993586 62.459 2 0.23631316712513664 0.00039635354736424893 0.00041423787094270985 ['ENSG00000164109|ENST00000296509|MAD2L1'] 141436 10884 YTFGTKEPLY True H1975_Epitope_Rep3 1217.5968402471299 1217.59574993586 46.948 2 0.23630903893688965 0.00039635354736424893 0.00041427714928468857 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 56880 14019 LDPSIFESLQK True H1975_Epitope_Rep1 1275.6710678165498 1275.66996993586 59.085 2 0.236291482301977 0.00039635354736424893 0.00041444423657589443 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 24273 16424 EYTDVLQKI True PC9_epitope_Rep6 1107.58119018299 1107.58008993586 75.579 2 0.2362757848948997 0.00039635354736424893 0.0004145936867488362 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 54564 7638 KYISKPENL True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 34.203 2 0.2362619177680918 0.00039635354736424893 0.00041472575635766173 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 27478 9592 FM[Oxidation]DPGPEGKLY True H1975_Epitope_Rep2 1268.574725284 1268.57362993586 41.87 2 0.2362492119283799 0.00039635354736424893 0.0004148468029909171 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 15272 8938 EAESSPFVER True PC9_epitope_Rep1 1149.5302172392899 1149.52912993586 39.221 2 0.23624864620180874 0.00039635354736424893 0.0004148521934072878 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 88853 10482 QVDEDALTY True H1975_Epitope_Rep2 1052.4662200004 1052.4651299358602 45.337 2 0.23624836110794184 0.00039635354736424893 0.0004148549098957595 ['ENSG00000114480|ENST00000429644|GBE1'] 54526 12631 KYIESPVLF True NCI_RA007_Epitope_Rep3 1094.60119735158 1094.60010993586 56.928 2 0.23623468737476094 0.00039635354736424893 0.00041498521965052757 ['ENSG00000100304|ENST00000216129|TTLL12'] 86678 20589 QLIDKVWQL True PC9_epitope_Rep2 1141.64954452633 1141.64844993586 84.627 2 0.23621264646344 0.00039635354736424893 0.00041519535448329427 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 103824 10358 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep3 1225.56488887629 1225.56378993586 44.897 2 0.23619661796228947 0.00039635354736424893 0.0004153482349025246 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 69572 8080 LVDEYSLNAGK True H1975_Epitope_Rep3 1207.6084675599898 1207.60736993586 36.054 2 0.23618822256933547 0.00039635354736424893 0.00041542833299371455 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 44526 9455 ILMEHIHKL True PC9_epitope_Rep2 1132.64268532408 1132.64104490379 41.707 3 0.23616223884175194 0.00039635354736424893 0.0004156763346550275 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 136764 19056 WYQTKFETL True PC9_epitope_Rep1 1214.5971746002997 1214.5966749679299 78.09 1 0.2361500976311276 0.00039635354736424893 0.0004157922673297054 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 118957 11407 VADTVARVL True PC9_epitope_Rep4 942.5498304850598 942.54872993586 51.647 2 0.2361427156384617 0.00039635354736424893 0.00041586277155448965 ['ENSG00000145632|ENST00000274289|PLK2'] 86918 6088 QLSSGVSEIR True NCI_RA007_Epitope_Rep5 1074.56693710118 1074.5658499358601 30.098 2 0.2361321111771602 0.00039635354736424893 0.00041596407404614346 ['ENSG00000106211|ENST00000248553|HSPB1'] 138195 15004 YGQISEVVVVK True PC9_epitope_Rep1 1219.68123857743 1219.68014993586 62.533 2 0.23610576054797777 0.00039635354736424893 0.0004162159040028619 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 26848 12057 FLDDGHTFNY True H1975_Epitope_Rep2 1227.51965255559 1227.5185499358602 51.459 2 0.23610119562501464 0.00039635354736424893 0.00041625954598961185 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 121307 6701 VETTEDLVAK True NCI_RA007_Epitope_Rep1 1103.5710194221099 1103.56992993586 30.076 2 0.23609713163576448 0.00039635354736424893 0.00041629840276704666 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB'] 14913 15350 DYAYLREHF True PC9_epitope_Rep4 1212.5563724174797 1212.55526993586 66.976 2 0.23606348841563027 0.00039635354736424893 0.00041662021343786 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 125935 6422 VLDEADEM[Oxidation]LNK True H1975_Epitope_Rep1 1291.5965829273898 1291.59548993586 29.762 2 0.2360536595237201 0.00039635354736424893 0.0004167142777571807 ['ENSG00000141543|ENST00000649764|EIF4A3'] 47234 5335 IVAVTGAEAQK True NCI_RA007_Epitope_Rep2 1085.6080736371698 1085.6069699358602 25.372 2 0.2360466231870238 0.00039635354736424893 0.0004167816298887312 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 140193 12308 YQTQLIQRV True PC9_epitope_Rep2 1147.6349570913499 1147.63386993586 52.656 2 0.23604313687618383 0.00039635354736424893 0.00041681500505833235 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 41259 8903 HVLVTLGEK True PC9_epitope_Rep1 994.58113061334 994.58002993586 39.084 2 0.2360426075666097 0.00039635354736424893 0.00041682007248198454 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 25299 9062 FDQLLAEEK True NCI_RA007_Epitope_Rep1 1091.5498900547097 1091.5487899358602 39.253 2 0.2360379262581165 0.00039635354736424893 0.0004168648923728202 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 73376 10213 MTEPRMLQY True H1975_Epitope_Rep2 1167.54165095347 1167.54054993586 44.289 2 0.23603488466880787 0.00039635354736424893 0.00041689401581755995 ['ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 48249 14627 IYQKPFQTL True PC9_epitope_Rep1 1136.62299542532 1136.62188993586 61.085 2 0.2360316614562284 0.00039635354736424893 0.000416924880546034 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 124662 20336 VGYDKDFLTI True PC9_epitope_Rep3 1169.5968402471299 1169.59574993586 83.473 2 0.23602455184603585 0.00039635354736424893 0.0004169929686115431 ['ENSG00000123066|ENST00000281928|MED13L'] 108302 13274 SYIQRLVQI True NCI_RA007_Epitope_Rep4 1118.64479349906 1118.64368993586 58.193 2 0.23601895798766578 0.00039635354736424893 0.0004170465483051311 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'SAMHD1|p.E417Kfs*6|1|0.22|ENSG00000101347|chr20:36911239-36911239|C/-|frameshift_variant', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1', 'SAMHD1|p.R339Vfs*5|1|0.31|ENSG00000101347|chr20:36916769-36916769|G/-|frameshift_variant'] 15080 20020 DYSSILQKF True PC9_epitope_Rep4 1099.55497543515 1099.5538699358601 85.142 2 0.236013476397429 0.00039635354736424893 0.00041709905935921214 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 53367 12438 KQTALVELLK True PC9_epitope_Rep4 1141.7070594024499 1141.7054249037901 55.649 3 0.23599960556866695 0.00039635354736424893 0.0004172319649952689 ['CON__P02769'] 82545 7653 PPSPPPPPP True PC9_epitope_Rep4 881.4647038787699 881.46360993586 36.819 2 0.23599524360674545 0.00039635354736424893 0.0004172737686327464 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'ENST00000230859.7_2_5:6713434-6713641:+|nuORF', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000100312|ENST00000216139|ACR', 'ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 27204 21914 FLMDFIHQV True PC9_epitope_Rep1 1148.56885167748 1148.56774993586 89.108 2 0.23597735344639315 0.00039635354736424893 0.000417445266121098 ['ENSG00000069248|ENST00000261396|NUP133'] 49383 4838 KETAEAYLGK True NCI_RA007_Epitope_Rep2 1108.5764391557198 1108.57534993586 23.442 2 0.23595742088340743 0.00039635354736424893 0.0004176364256273054 ['ENSG00000044574|ENST00000324460|HSPA5'] 134167 11637 VYLPNINKI True NCI_RA007_Epitope_Rep3 1072.62808080576 1072.6269899358601 52.896 2 0.23594786008412236 0.00039635354736424893 0.00041772814783629385 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 34931 5524 GQNPTNAEVLK True NCI_RA007_Epitope_Rep2 1169.6040508858898 1169.6029499358601 26.103 2 0.23592898958583733 0.00039635354736424893 0.0004179092426090243 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 6589 5692 APVNVTTEVK True H1975_Epitope_Rep3 1056.58152453616 1056.5804299358601 26.925 2 0.23591026736667026 0.00039635354736424893 0.0004180889922141498 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 104316 22854 SQIPFPLSL True PC9_epitope_Rep2 1000.5593325396 1000.55822993586 93.397 2 0.23590367593097614 0.00039635354736424893 0.00041815229419193083 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 49873 20167 KIFDEILVNA True PC9_epitope_Rep2 1160.64412479272 1160.64302993586 82.985 2 0.2358849078555741 0.00039635354736424893 0.00041833258927141535 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 130881 8781 VTDAVALRV True H1975_Epitope_Rep2 942.5498304850599 942.54872993586 38.741 2 0.23587736610436064 0.00039635354736424893 0.00041840506088990683 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'FIBP|p.D157Tfs*38|1|0.34|ENSG00000172500|chr11:65886365-65886365|C/-|frameshift_variant', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 66106 10149 LSELEAALQR True H1975_Epitope_Rep3 1128.6138872935999 1128.61278993586 44.083 2 0.2358638792059061 0.00039635354736424893 0.00041853469313802644 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 74886 7225 NHHLQETSF True PC9_epitope_Rep5 1111.50467119779 1111.50356993586 32.755 2 0.2358544535830649 0.00039635354736424893 0.00041862531347075494 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 54669 12487 KYLSVQGQLF True NCI_RA007_Epitope_Rep4 1181.64445914589 1181.6433699358602 55.044 2 0.23585291277819925 0.00039635354736424893 0.00041864012903171046 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 61390 8435 LITLEEEM[Oxidation]TK True NCI_RA007_Epitope_Rep1 1221.61625574281 1221.61514993586 36.809 2 0.23583056637894467 0.00039635354736424893 0.00041885505927186854 ['ENSG00000185624|ENST00000331483|P4HB'] 109791 9546 TEEAFNTQVTA True H1975_Epitope_Rep2 1209.55134660669 1209.5502499358602 41.69 2 0.23582423606138514 0.00039635354736424893 0.00041891596511104545 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 17590 9582 EHINEGETAM[Oxidation]L True PC9_epitope_Rep1 1258.5499670881397 1258.54886993586 41.713 2 0.23580634794594038 0.00039635354736424893 0.00041908811993261703 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 61886 13567 LLDDAQRLLY True H1975_Epitope_Rep1 1218.66083748602 1218.6597499358602 57.311 2 0.235780419254343 0.00039635354736424893 0.00041933778306903283 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'ZNF671|p.G225Afs*5|1|0.13|ENSG00000083814|chr19:57721412-57721412|C/-|frameshift_variant', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 8148 5426 ATELTHEDY True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 25.897 2 0.2357776499291165 0.00039635354736424893 0.00041936445726585716 ['ENSG00000165916|ENST00000298852|PSMC3'] 16567 10621 EELTLEGIR True H1975_Epitope_Rep3 1058.5607890915799 1058.5596899358602 45.924 2 0.23577506027141543 0.00039635354736424893 0.0004193894024413618 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 47718 20243 IYDKFIAQL True PC9_epitope_Rep1 1109.6120963884498 1109.61098993586 82.691 2 0.23576366963782275 0.00039635354736424893 0.00041949914170134124 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 29226 18381 FTVAELKQL True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 78.769 2 0.2357617860167645 0.00039635354736424893 0.0004195172915953138 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 6763 21124 AQDEHLITFF True PC9_epitope_Rep5 1219.58733819259 1219.58624993586 86.314 2 0.2357402743896439 0.00039635354736424893 0.0004197246257582447 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 70846 21373 LYDIILKNF True PC9_epitope_Rep3 1137.64339651673 1137.6422899358602 87.51 2 0.23573008846440363 0.00039635354736424893 0.00041982283597527455 ['ENSG00000092010|ENST00000206451|PSME1'] 43012 7101 IETIEVM[Oxidation]EDR True H1975_Epitope_Rep1 1249.58601824369 1249.5849299358601 32.339 2 0.235727959947075 0.00039635354736424893 0.0004198433615338703 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 142819 14426 YYSPHGHILVL True PC9_epitope_Rep4 1297.68190728377 1297.68080993586 63.399 2 0.23572555916297663 0.00039635354736424893 0.0004198665138029391 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 126116 6909 VLETAEDIQER True H1975_Epitope_Rep1 1301.6463096206896 1301.64520993586 31.617 2 0.23571765270985795 0.00039635354736424893 0.0004199427697507161 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 56083 5709 LATNTSAPDLK True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 26.988 2 0.23571174133598452 0.00039635354736424893 0.0004199997926876566 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 23003 10099 EVFEDAAEIR True NCI_RA007_Epitope_Rep1 1177.5615173675699 1177.5604299358602 43.294 2 0.23570802902299123 0.00039635354736424893 0.0004200356067748603 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 71203 17449 LYPDHFHLL True PC9_epitope_Rep4 1153.59202965021 1153.5903749037902 75.114 3 0.23567826756594257 0.00039635354736424893 0.00042032283754968287 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 1331 7266 AEDVLSGKVSA True H1975_Epitope_Rep2 1074.55570371114 1074.55460993586 32.884 2 0.23566711749879213 0.00039635354736424893 0.00042043049868079844 ['ENSG00000175390|ENST00000651655|EIF3F'] 73997 9356 NDEELNKLLGK True NCI_RA007_Epitope_Rep4 1271.6721304457099 1271.6710299358601 42.843 2 0.23566540098591246 0.00039635354736424893 0.0004204470751828966 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 137044 9580 YALYDATYETK True H1975_Epitope_Rep3 1336.61869789052 1336.6176099358602 41.86 2 0.23565837224680825 0.00039635354736424893 0.0004205149591170017 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 95961 8039 RYLEQLHQL True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64422490379 38.71 3 0.23564212324564565 0.00039635354736424893 0.0004206719349194331 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 114700 14485 TQIDHYVGI True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 60.987 2 0.23563301780064802 0.00039635354736424893 0.0004207599250709694 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 23495 4911 EVVEEAENGR True PC9_epitope_Rep1 1130.5203808315798 1130.5192899358601 23.754 2 0.23561011666541024 0.00039635354736424893 0.00042098131101175965 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 121255 7745 VETFSGVYK True NCI_RA007_Epitope_Rep5 1028.5178616504397 1028.51676993586 36.489 2 0.235581574335305 0.00039635354736424893 0.000421257394116069 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 71006 20126 LYIGWDKHYGF True PC9_epitope_Rep5 1397.67682190333 1397.6751749037899 82.462 3 0.2355753610116419 0.00039635354736424893 0.0004213175181707012 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 70041 11194 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6222899358602 48.026 2 0.23557099884378196 0.00039635354736424893 0.00042135973441234507 ['CON__P02769'] 108248 16363 SYIEHIFEI True NCI_RA007_Epitope_Rep1 1149.57062549929 1149.5695299358601 67.76 2 0.23553557935604796 0.00039635354736424893 0.00042170267470424634 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 77023 14227 NRIEELNQSL True PC9_epitope_Rep5 1214.62551460646 1214.62440993586 59.73 2 0.23551697241015698 0.00039635354736424893 0.00042188294394275246 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L', 'ENST00000543152.5_1_16:19590306-19619547:+|nuORF'] 35827 12043 GTLDYILQR True NCI_RA007_Epitope_Rep4 1077.5818588893299 1077.5807699358602 53.323 2 0.2355139799492883 0.00039635354736424893 0.0004219119429460209 ['ENSG00000140718|ENST00000471389|FTO'] 106180 8598 STDPREALQY True H1975_Epitope_Rep3 1178.5567663402999 1178.5556699358601 38.064 2 0.2355103516444055 0.00039635354736424893 0.0004219471063968503 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 57597 3938 LEEAEEEAQR True NCI_RA007_Epitope_Rep2 1202.5415101989797 1202.54040993586 19.954 2 0.23550744246152738 0.00039635354736424893 0.0004219753026529381 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 34103 11617 GM[Oxidation]DVAASEFFR True NCI_RA007_Epitope_Rep1 1244.54957316532 1244.54846993586 49.159 2 0.23550517880324992 0.00039635354736424893 0.0004219972436909627 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 138351 11392 YHFEEVQKL True PC9_epitope_Rep4 1191.5924235730297 1191.5907749037901 51.59 3 0.23550270196120693 0.00039635354736424893 0.00042202125237367466 ['ENSG00000140848|ENST00000290776|CPNE2'] 42259 12655 IDTIEIITDR True NCI_RA007_Epitope_Rep1 1187.63976768827 1187.6386699358602 53.207 2 0.2354945929370839 0.00039635354736424893 0.0004220998648680702 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 36922 15538 GVLQLGNIVFK True NCI_RA007_Epitope_Rep4 1186.70739375562 1186.70628993586 67.485 2 0.23549126466429526 0.00039635354736424893 0.000422132134879604 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 2382 4366 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 21.907 2 0.2354824024990362 0.00039635354736424893 0.00042221807204843203 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 89612 21651 QYPVYWDHLEF True PC9_epitope_Rep5 1495.67721582615 1495.67610993586 88.325 2 0.23546834649862022 0.00039635354736424893 0.00042235441026950804 ['ENSG00000090487|ENST00000204566|SPG21'] 120657 7046 VEILANDQGNR True PC9_epitope_Rep2 1227.6207635791898 1227.6196699358602 32.501 2 0.23545905964028058 0.00039635354736424893 0.0004224445137297701 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 15072 12326 DYSLDEFEANK True NCI_RA007_Epitope_Rep1 1329.57247597409 1329.57136993586 51.916 2 0.2354560582369342 0.00039635354736424893 0.0004224736382305903 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'ENST00000485212.1_1_10:95084294-95089482:-|nuORF'] 48447 19423 IYYVDVQKF True PC9_epitope_Rep1 1173.6070110080097 1173.6059099358602 79.522 2 0.23545168457638121 0.00039635354736424893 0.00042251608221052366 ['ENSG00000160410|ENST00000291842|SHKBP1'] 117633 6157 TVTISQVSDNK True NCI_RA007_Epitope_Rep1 1190.61428121642 1190.6131899358602 27.987 2 0.23544335372318248 0.00039635354736424893 0.0004225969404110085 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 139076 15261 YLDDPTNSWY True H1975_Epitope_Rep2 1272.52988288612 1272.52878993586 63.86 2 0.23544286307147627 0.00039635354736424893 0.00042260170309797973 ['ENSG00000064195|ENST00000434704|DLX3'] 103068 6038 SPGLQKEAV True PC9_epitope_Rep1 927.5025459394699 927.50144993586 28.038 2 0.23544147686461364 0.00039635354736424893 0.00042261515910359764 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 94859 4580 RSYHLQIVTK True NCI_RA007_Epitope_Rep3 1243.7037053575098 1243.70206490379 24.904 3 0.23543798636051935 0.00039635354736424893 0.00042264904357118186 ['ENSG00000131203|ENST00000518237|IDO1'] 111948 15702 TIQEEFYRV True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 68.323 2 0.2354271709058025 0.00039635354736424893 0.00042275405313967274 ['ENSG00000076003|ENST00000264156|MCM6'] 82974 11583 PSEYDTPLY True H1975_Epitope_Rep3 1083.47605640811 1083.4749499358602 49.683 2 0.23540322206944056 0.00039635354736424893 0.000422986670671592 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 86995 11818 QMDESEQYLY True H1975_Epitope_Rep2 1304.5230832535199 1304.5219899358601 50.534 2 0.23538736095440857 0.00039635354736424893 0.0004231408019978728 ['nc|ENSG00000075945|Q92845-4|KIFAP3', 'nc|ENSG00000075945|Q92845-2|KIFAP3', 'nc|ENSG00000075945|Q92845-3|KIFAP3', 'ENSG00000075945|ENST00000361580|KIFAP3'] 113802 12998 TNAENEFVTIK True PC9_epitope_Rep5 1264.6299312805597 1264.62882993586 55.006 2 0.23537918396728927 0.00039635354736424893 0.00042322028436265384 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 108697 9512 SYRDSYESY True PC9_epitope_Rep5 1168.4672826295598 1168.46618993586 41.546 2 0.23536822536629756 0.00039635354736424893 0.00042332682819651567 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 68321 13240 LTELMFEHY True H1975_Epitope_Rep2 1181.54269649929 1181.5415899358602 56.056 2 0.23535519869037672 0.00039635354736424893 0.00042345351366992833 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 17015 2681 EGDKHTLSKK True NCI_RA007_Epitope_Rep2 1141.6091362663299 1141.60750490379 14.651 3 0.23534980061565294 0.00039635354736424893 0.0004235060215256831 ['ENSG00000197956|ENST00000368719|S100A6', 'ENST00000462951.2_1_1:153507620-153508442:-|nuORF'] 22925 10951 EVEELILTESK True H1975_Epitope_Rep3 1288.67621276664 1288.67510993586 47.211 2 0.2353459139654156 0.00039635354736424893 0.00042354383158030084 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 40287 16003 HQLTEVGTMNI True PC9_epitope_Rep1 1241.60742201417 1241.60632993586 66.366 2 0.23534523158653126 0.00039635354736424893 0.0004235504702381196 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 138060 13200 YGEPGEVFINK True PC9_epitope_Rep4 1251.6135529404298 1251.61244993586 58.673 2 0.23533493178689724 0.00039635354736424893 0.0004236506865528028 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 73228 14265 MSDPYMPSYY True H1975_Epitope_Rep3 1252.4780476374 1252.4769499358601 60.212 2 0.23533235373879677 0.00039635354736424893 0.0004236757744983091 ['ENSG00000185728|ENST00000539294|YTHDF3'] 30106 20359 FYLEGGFSKF True PC9_epitope_Rep2 1193.57571087973 1193.57460993586 83.733 2 0.23532737122295794 0.00039635354736424893 0.0004237242654376337 ['ENSG00000139318|ENST00000279488|DUSP6'] 57217 9876 LDVTSVEDYK True H1975_Epitope_Rep1 1167.5659340416698 1167.5648299358602 42.921 2 0.23532230922288855 0.00039635354736424893 0.00042377353563600474 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 21527 12652 ERMPEQIRL True PC9_epitope_Rep3 1170.61792712822 1170.61627490379 53.69 3 0.23532020492824765 0.00039635354736424893 0.0004237940191549381 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 131147 5760 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 27.153 2 0.23531972278421046 0.00039635354736424893 0.0004237987125569925 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 84362 21198 PYYSKFILI True PC9_epitope_Rep3 1142.6375828603 1142.63648993586 86.828 2 0.23529246775673207 0.00039635354736424893 0.0004240641097749397 ['ENSG00000164815|ENST00000297431|ORC5'] 54048 11051 KVIDPATATSV True PC9_epitope_Rep5 1100.607739284 1100.60664993586 47.495 2 0.23527277416467263 0.00039635354736424893 0.0004242559808776043 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 70975 16344 LYGRNFNYL True PC9_epitope_Rep4 1158.5821932425 1158.58108993586 70.832 2 0.23526593561715461 0.00039635354736424893 0.00042432262797604517 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 120629 8851 VEIEDINDHTP True H1975_Epitope_Rep1 1280.5884603913998 1280.5873699358601 38.967 2 0.23526025256688526 0.00039635354736424893 0.00042437802182263663 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 34176 16779 GNFNYVEFTR True PC9_epitope_Rep2 1245.5778361380499 1245.5767299358602 69.787 2 0.2352538197074369 0.00039635354736424893 0.00042444073296442716 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 125930 17197 VLDDKLYVV True PC9_epitope_Rep4 1062.5961119711399 1062.5950099358602 74.154 2 0.23522980740428537 0.00039635354736424893 0.00042467490055837326 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 24096 18984 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5797699358602 78.048 2 0.23522965510667584 0.00039635354736424893 0.00042467638617571133 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 16658 8142 EEQLQQIRAE True PC9_epitope_Rep4 1242.6204292260197 1242.6193299358602 38.773 2 0.2352064639231733 0.00039635354736424893 0.00042490267003867803 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 32455 7814 GGAEGELQALR True H1975_Epitope_Rep1 1099.56218607391 1099.56108993586 35.01 2 0.23519408101292416 0.00039635354736424893 0.00042502354361746784 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 23665 18975 EYALLYHTL True PC9_epitope_Rep4 1121.5757108797302 1121.57460993586 81.077 2 0.2351798910036981 0.00039635354736424893 0.00042516209928214683 ['AOC1|p.P703Qfs*12|1|0.24|ENSG00000002726|chr7:150861059-150861059|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 138790 21381 YIVDLLTHL True PC9_epitope_Rep4 1085.61209638845 1085.61098993586 90.41 2 0.23513955477575757 0.00039635354736424893 0.00042555620225968963 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 43226 17762 IFKPPDPDNTF True PC9_epitope_Rep5 1289.62920300457 1289.62810993586 73.34 2 0.23513671740483574 0.00039635354736424893 0.00042558393843303424 ['ENSG00000165943|ENST00000298894|MOAP1'] 7958 6862 ATAVVDGAFK True H1975_Epitope_Rep3 977.5181960036098 977.51708993586 31.353 2 0.23513330276304528 0.00039635354736424893 0.00042561732001093316 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 130877 5441 VTDALNATR True PC9_epitope_Rep3 959.50360856863 959.50250993586 26.002 2 0.23511584352031353 0.00039635354736424893 0.00042578804282266634 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 46837 10530 ITIFEKQEY True H1975_Epitope_Rep2 1169.5968402471299 1169.59574993586 45.525 2 0.23511563589663742 0.00039635354736424893 0.0004257900734555671 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 141890 9026 YVDQAELEKY True H1975_Epitope_Rep3 1256.5924831426798 1256.5913899358602 39.713 2 0.23509975699753624 0.00039635354736424893 0.0004259454034833835 ['ENSG00000112972|ENST00000325110|HMGCS1', 'ENST00000507004.1_1_5:43298575-43313480:-|nuORF', 'ENST00000507293.1_1_5:43298575-43313499:-|nuORF'] 53284 15577 KQLDDLKVEL True PC9_epitope_Rep1 1199.6761531969898 1199.6745149037902 64.739 3 0.23507952677486818 0.00039635354736424893 0.00042614338122315626 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 107959 8483 SVYDSVLQK True NCI_RA007_Epitope_Rep5 1037.5393253710097 1037.53822993586 39.313 2 0.23507701410571333 0.00039635354736424893 0.00042616797724069904 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 103165 12288 SPIENIQRVA True PC9_epitope_Rep2 1125.6142216467701 1125.6131299358601 52.575 2 0.2350752363965984 0.00039635354736424893 0.0004261853797410473 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 103172 10895 SPIENIQRVA True PC9_epitope_Rep6 1125.6142216467701 1125.6131299358601 52.77 2 0.23505381024369804 0.00039635354736424893 0.0004263951825282137 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 24147 10714 EYQDLLNVK True NCI_RA007_Epitope_Rep2 1120.5764391557198 1120.5758749679298 46.273 1 0.2350269008747196 0.00039635354736424893 0.0004266588232004276 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 118239 8790 TYLEKAIKI True NCI_RA007_Epitope_Rep3 1077.6433965167298 1077.6422899358602 41.664 2 0.23502605511595004 0.00039635354736424893 0.0004266671120502021 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 139061 10346 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 44.744 2 0.23502460674145678 0.00039635354736424893 0.0004266813072041041 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 120644 5705 VEILANDQGNR True H1975_Epitope_Rep3 1227.6207635791898 1227.6196699358602 26.975 2 0.2350203459776524 0.00039635354736424893 0.00042672306862457656 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 135107 8006 WEEERNFGA True H1975_Epitope_Rep3 1136.4886867804798 1136.4875899358601 35.766 2 0.23499128358893417 0.00039635354736424893 0.0004270080299003946 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000515226.5_1_5:71524027-71524234:-|nuORF', 'ENST00000522562.5_1_5:71523001-71533927:-|nuORF'] 77836 16038 NVDSSYLESLY True H1975_Epitope_Rep2 1288.5823123818002 1288.5812099358602 66.889 2 0.234990065821536 0.00039635354736424893 0.00042701997446648396 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1', 'nc|ENSG00000105939|Q7Z2W4-5|ZC3HAV1', 'ZC3HAV1|p.V650Cfs*12|1|0.31|ENSG00000105939|chr7:139064924-139064924|C/-|frameshift_variant', 'nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1'] 65768 11027 LSDFESGLKY True H1975_Epitope_Rep2 1157.5604547384098 1157.5593499358602 47.445 2 0.23497211509055238 0.00039635354736424893 0.00042719608449361606 ['ENSG00000120800|ENST00000261637|UTP20'] 14138 11805 DSDHLTIYNAY True H1975_Epitope_Rep2 1310.5778957077 1310.57678993586 50.484 2 0.23494993334790992 0.00039635354736424893 0.0004274138045351903 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 85878 17031 QHFDTIYSI True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 73.502 2 0.234922149580528 0.00039635354736424893 0.0004276866670527228 ['ENSG00000010292|ENST00000315579|NCAPD2'] 134771 19311 VYTTTVHWL True PC9_epitope_Rep1 1118.5760452329 1118.57494993586 79.085 2 0.2349026983095024 0.00039635354736424893 0.00042787780066438685 ['ENSG00000174231|ENST00000304992|PRPF8'] 134911 10349 VYVVGTAHF True NCI_RA007_Epitope_Rep4 991.5127167003499 991.5121649679301 46.663 1 0.23489320582199355 0.00039635354736424893 0.0004279711076009841 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 61888 13745 LLDDAQRLLY True H1975_Epitope_Rep2 1218.66083748602 1218.6597499358602 58.016 2 0.23488269691440974 0.00039635354736424893 0.0004280744293016055 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'ZNF671|p.G225Afs*5|1|0.13|ENSG00000083814|chr19:57721412-57721412|C/-|frameshift_variant', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 78303 17006 NYIPRFWTF True NCI_RA007_Epitope_Rep4 1242.6185787512197 1242.61748993586 73.694 2 0.23488214668688695 0.00039635354736424893 0.0004280798397295324 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 44847 9109 INEVENQILTR True H1975_Epitope_Rep1 1327.7095785835897 1327.7084899358601 39.941 2 0.23487937015046878 0.00039635354736424893 0.0004281071426639183 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 78159 12550 NYAQVLDKF True NCI_RA007_Epitope_Rep5 1096.5553097883198 1096.5542099358602 54.927 2 0.23486875479550232 0.00039635354736424893 0.000428211544341945 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 109465 10867 TDLLLEPYNK True H1975_Epitope_Rep1 1204.6339540318397 1204.6328499358601 46.759 2 0.2348533417723503 0.00039635354736424893 0.0004283631763973358 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 119750 15225 VAYEEFEKV True PC9_epitope_Rep5 1112.5389910178399 1112.5378899358602 63.572 2 0.23483712189025194 0.00039635354736424893 0.0004285228044290781 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 42196 5455 IDRPEAISEER True NCI_RA007_Epitope_Rep1 1313.6575430107298 1313.6558849037901 25.292 3 0.23483317025839534 0.00039635354736424893 0.0004285617034677795 ['ENSG00000152700|ENST00000402673|SAR1B'] 45490 16184 IQLVEEELDR True PC9_epitope_Rep5 1242.6455813446998 1242.64448993586 67.241 2 0.23482337262535388 0.00039635354736424893 0.00042865816460004616 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 8644 10820 AVAEEVNAILK True NCI_RA007_Epitope_Rep3 1155.6499384491499 1155.6488499358602 49.608 2 0.23481902152900738 0.00039635354736424893 0.00042870100965242976 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 25298 8526 FDQLLAEEK True H1975_Epitope_Rep3 1091.5498900547097 1091.5487899358602 37.781 2 0.23481900780937653 0.00039635354736424893 0.0004287011447558183 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 140813 4190 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 21.224 2 0.23481829805184443 0.00039635354736424893 0.00042870813411641446 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 134875 16124 VYVQHPITF True PC9_epitope_Rep1 1102.5811306133398 1102.58002993586 66.836 2 0.23479711769420725 0.00039635354736424893 0.00042891676099364673 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 137426 7918 YEDATKITV True H1975_Epitope_Rep3 1038.5233409537 1038.5222499358601 35.426 2 0.23478400326434573 0.00039635354736424893 0.00042904598939577285 ['ENSG00000132383|ENST00000254719|RPA1'] 111378 7702 THSDIQVKL True PC9_epitope_Rep2 1039.56620882519 1039.5651099358602 35.0 2 0.2347805734394481 0.00039635354736424893 0.0004290797930216106 ['ENSG00000105223|ENST00000409735|PLD3'] 141254 12343 YTDHLQSYVIY True H1975_Epitope_Rep3 1400.6612314088402 1400.6601299358601 52.662 2 0.23476401676607564 0.00039635354736424893 0.00042924300965804097 ['ENSG00000090989|ENST00000381295|EXOC1', 'nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENST00000511971.5_1_4:56749994-56766742:+|nuORF'] 29689 22777 FVLPELPSV True PC9_epitope_Rep3 999.56408356687 999.56298993586 92.881 2 0.2347150389192648 0.00039635354736424893 0.00042972620078966377 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 110118 5732 TEMNGRIVAT True H1975_Epitope_Rep2 1090.5440934816197 1090.54298993586 27.046 2 0.2347122087595546 0.00039635354736424893 0.00042975413840995127 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 40972 4679 HTDILKEKY True H1975_Epitope_Rep3 1145.60807363717 1145.60641490379 23.122 3 0.2346863815828199 0.00039635354736424893 0.0004300091728285194 ['nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 106264 5309 STESLQANVQR True NCI_RA007_Epitope_Rep1 1231.6156781987497 1231.61458993586 24.732 2 0.2346771076277651 0.00039635354736424893 0.00043010078696076803 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 25560 13839 FEITPPVVLR True H1975_Epitope_Rep3 1169.68084465461 1169.6797499358602 58.54 2 0.23466862839749453 0.00039635354736424893 0.0004301845674214623 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 140680 16843 YRVFTTQEL True PC9_epitope_Rep5 1155.5924235730297 1155.5913299358601 69.796 2 0.23466659264189685 0.00039635354736424893 0.00043020468448390505 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 90247 7950 REEEMTVVEEA True H1975_Epitope_Rep2 1320.5867461392397 1320.5856499358601 35.529 2 0.23465163913208292 0.00039635354736424893 0.0004303524819796185 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1'] 23981 20194 EYMEHVYLI True PC9_epitope_Rep1 1195.5583465634297 1195.55724993586 82.505 2 0.23463115916022106 0.00039635354736424893 0.00043055498457178503 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 118458 16317 TYPKIWVKV True PC9_epitope_Rep1 1132.66446631448 1132.66282490379 67.582 3 0.23462463676378062 0.00039635354736424893 0.00043061949702073547 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 46035 13446 ISGLIYEETR True PC9_epitope_Rep2 1179.6135529404298 1179.61244993586 57.0 2 0.2346122476388506 0.00039635354736424893 0.0004307420634672132 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 49063 10109 KEIDAYIVQA True H1975_Epitope_Rep1 1148.607739284 1148.60664993586 43.821 2 0.23460488261896595 0.00039635354736424893 0.0004308149426890856 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 43429 8524 IGGIGTVPVGR True H1975_Epitope_Rep3 1024.6029286870798 1024.60182993586 37.773 2 0.23456901237866018 0.00039635354736424893 0.000431170067023938 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 141260 5179 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 24.994 2 0.23456713109347074 0.00039635354736424893 0.00043118870031917065 ['ENSG00000125398|ENST00000245479|SOX9'] 95649 8298 RYFDPANGKF True NCI_RA007_Epitope_Rep3 1213.5880068989297 1213.58635490379 39.76 3 0.23456260203940676 0.00039635354736424893 0.0004312335619036656 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 118382 18317 TYNYPVHYF True PC9_epitope_Rep1 1202.53965972418 1202.53856993586 75.246 2 0.2345543887529792 0.00039635354736424893 0.0004313149288149759 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 86681 20878 QLIDKVWQL True PC9_epitope_Rep5 1141.64954452633 1141.64844993586 85.359 2 0.2345436733721298 0.00039635354736424893 0.00043142110648374617 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 108363 18080 SYLEKQVVTF True PC9_epitope_Rep5 1212.6390394122798 1212.6379499358602 74.558 2 0.23453954345694727 0.00039635354736424893 0.00043146203641226163 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 95886 7435 RYLDKTEQW True NCI_RA007_Epitope_Rep4 1237.6091362663299 1237.60802993586 35.243 2 0.23453413273308418 0.00039635354736424893 0.0004315156658151849 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 62200 5194 LLEQYKEESK True NCI_RA007_Epitope_Rep2 1265.6503323719696 1265.6486849037901 24.823 3 0.23452269924508384 0.00039635354736424893 0.00043162901296790263 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 57681 10585 LEEGGFFEEK True NCI_RA007_Epitope_Rep1 1183.5397192938296 1183.5386299358602 45.158 2 0.2344978021351064 0.00039635354736424893 0.0004318759365692394 ['ENST00000393551.5_1_5:176914951-176916539:-|nuORF', 'ENST00000486828.6_1_5:176910647-176917003:-|nuORF', 'nc|ENSG00000196923|Q9NR12-2|PDLIM7', 'ENSG00000196923|ENST00000355841|PDLIM7'] 106127 7862 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58028490379 35.187 3 0.2344838104841001 0.00039635354736424893 0.00043201476461502303 ['ENSG00000168090|ENST00000303904|COPS6'] 29200 8229 FTSIGEDYDER True H1975_Epitope_Rep3 1330.5677249468197 1330.5666299358602 36.637 2 0.23447911023434218 0.00039635354736424893 0.0004320614115065361 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 49542 9017 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 44.718 2 0.2344763822770642 0.00039635354736424893 0.00043208848700776985 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 82544 5722 PPSPPPPPP True NCI_RA007_Epitope_Rep3 881.4647038787699 881.46360993586 29.484 2 0.23446829660260168 0.00039635354736424893 0.0004321687488827761 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'ENST00000230859.7_2_5:6713434-6713641:+|nuORF', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000100312|ENST00000216139|ACR', 'ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 137170 9435 YAYDGKDYL True NCI_RA007_Epitope_Rep4 1106.4920408254197 1106.49094993586 43.151 2 0.2344588839239952 0.00039635354736424893 0.00043226220200921067 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 73313 8663 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 38.281 2 0.2344576250720154 0.00039635354736424893 0.0004322747019705058 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 107649 9704 SVQGIILYR True NCI_RA007_Epitope_Rep3 1047.6076797143498 1047.60658993586 45.245 2 0.23445224875026563 0.00039635354736424893 0.0004323280910524485 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 134746 19387 VYTSKSDVWSF True PC9_epitope_Rep3 1317.62411762413 1317.6230299358601 79.795 2 0.2344510884090243 0.00039635354736424893 0.0004323396145851052 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 140827 4168 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 21.15 2 0.23444662196557137 0.00039635354736424893 0.00043238397441818963 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 97619 6133 SEFEQNLSEK True H1975_Epitope_Rep3 1209.5513466066898 1209.5502499358602 28.603 2 0.23444146852131187 0.00039635354736424893 0.00043243516308058344 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 41460 13018 HYKPTPLYF True PC9_epitope_Rep4 1164.59678067748 1164.59568993586 57.97 2 0.23442940116913044 0.00039635354736424893 0.0004325550507049002 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 107278 20851 SVLDDNKLLTL True PC9_epitope_Rep5 1229.68671788069 1229.68562993586 85.253 2 0.23442464824045495 0.00039635354736424893 0.00043260227960439755 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 107536 16191 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 70.221 2 0.2344231316327928 0.00039635354736424893 0.0004326173509193381 ['ENSG00000073756|ENST00000367468|PTGS2'] 88595 11151 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51807496793 47.86 1 0.23441936089747847 0.00039635354736424893 0.00043265482494968146 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 63508 8922 LLYESPERY True H1975_Epitope_Rep1 1168.57643915572 1168.57534993586 39.224 2 0.2344001384801919 0.00039635354736424893 0.00043284591030785113 ['nc|ENSG00000168394|Q03518-2|TAP1', 'ENSG00000168394|ENST00000354258|TAP1'] 9198 12048 AVLYQPLFDK True NCI_RA007_Epitope_Rep3 1192.6492101731599 1192.64810993586 54.513 2 0.23439070714906005 0.00039635354736424893 0.00043293969582445336 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 72657 4593 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 22.772 2 0.23437431723664434 0.00039635354736424893 0.00043310272623354584 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 68408 9955 LTETIYKNYY True H1975_Epitope_Rep3 1306.64451871554 1306.64342993586 43.325 2 0.23436611797766596 0.00039635354736424893 0.0004331843073463101 ['ENSG00000146834|ENST00000310512|MEPCE', 'nc|ENSG00000289690|Q7L2J0-2|MEPCE'] 54616 8095 KYLDNPNAL True NCI_RA007_Epitope_Rep4 1046.53965972418 1046.53856993586 37.924 2 0.23435508725267443 0.00039635354736424893 0.00043329408534267875 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 78307 21967 NYIPRFWTF True PC9_epitope_Rep3 1242.6185787512197 1242.61748993586 89.796 2 0.23434763711915582 0.00039635354736424893 0.00043336824500970534 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 140920 14332 YSEIKDFLSY True H1975_Epitope_Rep2 1263.60231955039 1263.6012299358601 60.277 2 0.2343441058364227 0.00039635354736424893 0.00043340340033764624 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C', 'ENST00000492201.5_1_10:14962436-14970058:-|nuORF'] 13797 13569 DQIYDIFQK True H1975_Epitope_Rep1 1168.5764391557198 1168.57534993586 57.319 2 0.23433878131050045 0.00039635354736424893 0.0004334564135255097 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 106393 8975 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.5913299358601 41.18 2 0.2343337596765586 0.00039635354736424893 0.0004335064169554458 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 120043 12568 VDSLLENLEK True NCI_RA007_Epitope_Rep1 1158.61321858726 1158.6121299358601 52.865 2 0.23432673983962105 0.00039635354736424893 0.0004335763273931005 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 130512 5112 VSQEPFPNK True NCI_RA007_Epitope_Rep4 1044.5240096600398 1044.52290993586 26.175 2 0.23431185286493034 0.00039635354736424893 0.0004337246239488429 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 112541 8401 TLEDPDLNVR True H1975_Epitope_Rep1 1170.5880664685799 1170.58696993586 37.242 2 0.2343080124951621 0.00039635354736424893 0.00043376288803638626 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'ENST00000540319.5_1_12:67701199-67704144:+|nuORF'] 7941 6689 ATAQVNPLYK True NCI_RA007_Epitope_Rep4 1103.5975089534697 1103.59640993586 32.354 2 0.23429277743662505 0.00039635354736424893 0.0004339147181430832 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENST00000425115.1_1_3:44751367-44751973:-|nuORF'] 54492 18408 KYIDFDHVF True PC9_epitope_Rep4 1182.57095985246 1182.5698699358602 78.872 2 0.23427920178407552 0.00039635354736424893 0.00043405005579756606 ['ENSG00000007545|ENST00000397412|CRAMP1'] 98040 9130 SEQLDLPVRQA True H1975_Epitope_Rep1 1254.65681473474 1254.6557099358602 40.024 2 0.2342789042462318 0.00039635354736424893 0.00043405302246974503 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 100883 9060 SLESYAFNM[Oxidation]K True H1975_Epitope_Rep1 1204.5434251557197 1204.5423299358602 39.758 2 0.23427854318540883 0.00039635354736424893 0.00043405662254028765 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 71838 18924 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep3 1146.62061316356 1146.6195099358602 79.36 2 0.2342756248864568 0.00039635354736424893 0.0004340857214576686 ['ENSG00000108424|ENST00000290158|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant'] 24314 15733 EYVEKFYRI True PC9_epitope_Rep3 1245.6393737654498 1245.63772490379 65.677 3 0.23425595397378834 0.00039635354736424893 0.00043428191494974125 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 88254 14054 QSDPWQQELY True H1975_Epitope_Rep1 1292.5673310240002 1292.5667749679299 59.224 1 0.23425389394923685 0.00039635354736424893 0.00043430246634047314 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 13898 10417 DQVANSAFVER True PC9_epitope_Rep3 1234.59421447818 1234.5931099358602 45.008 2 0.23424116287244726 0.00039635354736424893 0.00043442949682965485 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 5425 8850 ALTPDETYVPK True NCI_RA007_Epitope_Rep2 1232.6288686514001 1232.6277699358602 39.073 2 0.2342348371475772 0.00039635354736424893 0.0004344926286753826 ['CON__P02769'] 72935 12953 MPWGDPNYRSA True PC9_epitope_Rep6 1292.5608061749201 1292.5597099358602 61.375 2 0.23422908912091517 0.00039635354736424893 0.00043455000297222367 ['ENSG00000124226|ENST00000244061|RNF114'] 8853 6742 AVFDGAQVTSK True NCI_RA007_Epitope_Rep5 1121.57168812845 1121.5705899358602 32.607 2 0.23421535456141887 0.00039635354736424893 0.00043468712613611453 ['ENSG00000175274|ENST00000525680|TP53I11'] 95658 12134 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.5869099358601 51.983 2 0.23420094611720974 0.00039635354736424893 0.0004348310238855182 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 133656 9605 VYANGIRNI True PC9_epitope_Rep4 1018.5559784946599 1018.55488993586 44.57 2 0.2342000263443985 0.00039635354736424893 0.0004348402113183534 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 135174 12454 WEQDGGRWLP True H1975_Epitope_Rep2 1242.5781704912197 1242.5770699358602 52.994 2 0.23419886073069338 0.00039635354736424893 0.00043485185468811416 ['ENSG00000166592|ENST00000299759|RRAD'] 141705 11913 YTVEDTHYV True PC9_epitope_Rep5 1125.49785448185 1125.4967499358602 50.821 2 0.2341874645321022 0.00039635354736424893 0.00043496570832583786 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 111949 17061 TIQEEFYRV True PC9_epitope_Rep5 1183.5873381925899 1183.58624993586 70.644 2 0.23418387597686297 0.00039635354736424893 0.00043500156595059 ['ENSG00000076003|ENST00000264156|MCM6'] 35982 5783 GTVIHFNNPK True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59198993586 28.866 2 0.23415195098239328 0.00039635354736424893 0.0004353206980034334 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 90582 7411 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 33.484 2 0.23413515179994254 0.00039635354736424893 0.0004354887220896153 ['ENSG00000026025|ENST00000544301|VIM'] 109468 11591 TDLLLEPYNK True NCI_RA007_Epitope_Rep1 1204.6339540318397 1204.6328499358601 49.057 2 0.23412359984855496 0.00039635354736424893 0.00043560430153625226 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 39335 6565 HIYYITGETK True NCI_RA007_Epitope_Rep1 1223.6186383208699 1223.61754993586 29.551 2 0.23412311087472068 0.00039635354736424893 0.00043560919449019505 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 108517 16828 SYMLVNENRF True PC9_epitope_Rep2 1271.5968573304701 1271.59576993586 69.978 2 0.23411896690514244 0.00039635354736424893 0.0004356506636512039 ['ENSG00000182195|ENST00000370526|LDOC1'] 108682 9688 SYQRAFNEF True NCI_RA007_Epitope_Rep4 1160.5250722892 1160.5239699358601 44.114 2 0.23411734905826423 0.00039635354736424893 0.0004356668546983271 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 23967 9847 EYLTKVDKL True PC9_epitope_Rep4 1107.6175756917098 1107.61646993586 45.527 2 0.2341167066523331 0.00039635354736424893 0.0004356732839196058 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 118299 19467 TYLPTSPLL True PC9_epitope_Rep6 1003.55899818643 1003.55790993586 87.543 2 0.2341058168916111 0.00039635354736424893 0.00043578228351227665 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 54038 14385 KVIDEIYRV True PC9_epitope_Rep5 1133.64445914589 1133.64280490379 60.332 3 0.23409688111331226 0.00039635354736424893 0.0004358717454141463 ['ENSG00000143756|ENST00000366862|FBXO28'] 105629 8536 SSDSVGGFRY True H1975_Epitope_Rep2 1073.47778774361 1073.4766899358601 37.788 2 0.23409420255490762 0.00039635354736424893 0.00043589856579728055 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 41978 8482 IDEPLEGSEDR True PC9_epitope_Rep2 1258.56772494682 1258.5666299358602 37.993 2 0.23408236320667528 0.00039635354736424893 0.0004360171329248459 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 52759 3770 KNGELENIKPK True NCI_RA007_Epitope_Rep2 1268.7088503076 1268.7072149037901 19.304 3 0.23404612848941836 0.00039635354736424893 0.00043638021260837914 ['nc|ENSG00000168092|P68402-3|PAFAH1B2', 'nc|ENSG00000168092|P68402-2|PAFAH1B2', 'ENST00000533206.1_1_11:117023163-117034692:+|nuORF', 'nc|ENSG00000168092|P68402-4|PAFAH1B2', 'ENSG00000168092|ENST00000527958|PAFAH1B2'] 116859 6118 TVEVAEGEAVR True NCI_RA007_Epitope_Rep2 1158.5880664685799 1158.58696993586 28.403 2 0.23402225979271676 0.00039635354736424893 0.0004366195477773001 ['ENSG00000147649|ENST00000336273|MTDH', 'LAPTM4B-MTDH|1|fusion'] 11580 7382 DGANIVIAAK True H1975_Epitope_Rep3 970.5447451046199 970.54364993586 33.374 2 0.23401710324397212 0.00039635354736424893 0.0004366712705950239 ['nc|ENSG00000119471|Q6YN16-2|HSDL2', 'ENSG00000119471|ENST00000398805|HSDL2'] 108536 13330 SYMPTVSHL True PC9_epitope_Rep6 1033.49026700361 1033.4891699358602 62.931 2 0.23401640179026398 0.00039635354736424893 0.0004366783070089073 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 91046 21305 RFLDDLGLKF True PC9_epitope_Rep1 1222.6710082468996 1222.66936490379 86.778 3 0.23400724329231024 0.00039635354736424893 0.00043677018805966296 ['ENSG00000046604|ENST00000261590|DSG2'] 72496 7812 M[Oxidation]LDSHEELY True H1975_Epitope_Rep2 1151.48049054599 1151.4793899358601 34.996 2 0.2340005970112452 0.00039635354736424893 0.00043683687787100063 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 6744 5045 AQDEERQASL True PC9_epitope_Rep1 1145.53127986845 1145.53018993586 24.262 2 0.23398942911348825 0.00039635354736424893 0.00043694896128635254 ['ENSG00000184575|ENST00000332707|XPOT'] 140815 4370 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 21.922 2 0.2339786549533321 0.00039635354736424893 0.00043705712040750176 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 68013 11486 LTDIFQHDTY True H1975_Epitope_Rep1 1251.57716743171 1251.57606993586 49.164 2 0.23396405866373787 0.00039635354736424893 0.00043720369177727744 ['ENSG00000164366|ENST00000296824|CCDC127'] 95958 9113 RYLEQLHQL True NCI_RA007_Epitope_Rep2 1198.64585612822 1198.64474993586 40.053 2 0.2339507934717168 0.00039635354736424893 0.00043733693945003033 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 139181 9511 YLEETSIRY True H1975_Epitope_Rep3 1172.57135377528 1172.5702499358601 41.59 2 0.23393786207190792 0.00039635354736424893 0.00043746687342257923 ['ENSG00000158796|ENST00000368006|DEDD', 'nc|ENSG00000158796|O75618-2|DEDD'] 16770 4918 EETQPPVALKK True NCI_RA007_Epitope_Rep2 1238.6870522338597 1238.6854049037902 23.75 3 0.23392109060876504 0.00039635354736424893 0.0004376354498173743 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000510079.2_1_4:79102753-79102939:-|nuORF'] 53116 13263 KPTETLLNTV True PC9_epitope_Rep2 1114.62338934814 1114.6222899358602 56.29 2 0.23390744269697855 0.00039635354736424893 0.00043777267829082326 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 78187 15224 NYAWVYYHL True NCI_RA007_Epitope_Rep5 1227.57129420563 1227.57018993586 65.243 2 0.23386715586929613 0.00039635354736424893 0.00043817801038928617 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant', 'ENSG00000119917|ENST00000371818|IFIT3'] 28365 12360 FRVKYETEL True PC9_epitope_Rep2 1183.62372370131 1183.62262993586 52.852 2 0.23386277421104662 0.00039635354736424893 0.00043822211763424956 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 26842 11401 FLDASGAKLDY True H1975_Epitope_Rep3 1198.5870038394198 1198.5859099358602 48.97 2 0.2338459079759436 0.00039635354736424893 0.0004383919403987597 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 47687 16340 IYADNQVMHF True PC9_epitope_Rep4 1236.55974354576 1236.55864993586 70.816 2 0.23383982237569417 0.00039635354736424893 0.0004384532313025884 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 19490 8459 ELPDPQESIQR True NCI_RA007_Epitope_Rep2 1310.64664397386 1310.6455499358601 37.547 2 0.23383906956638645 0.00039635354736424893 0.00043846081379184565 ['CON__Q29443', 'CON__Q0IIK2'] 48244 12090 IYQKAFEHL True PC9_epitope_Rep3 1147.6025943339098 1147.60093490379 51.546 3 0.2338218198026362 0.00039635354736424893 0.0004386345938997322 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 70333 11266 LVSESSDVLPK True PC9_epitope_Rep5 1172.6288686514001 1172.6277699358602 48.327 2 0.2338212275666213 0.00039635354736424893 0.00043864056151757 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 21940 10239 ESEDPDYYQY True H1975_Epitope_Rep1 1307.48299226335 1307.4818899358602 44.327 2 0.2337916938706834 0.00039635354736424893 0.00043893825871566265 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 38413 2947 HENESVYKA True H1975_Epitope_Rep2 1075.4934378077498 1075.4923499358601 15.576 2 0.23377710896993403 0.00039635354736424893 0.0004390853480522343 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 48398 10313 IYTSSVNRL True PC9_epitope_Rep5 1051.56620882519 1051.5651099358602 44.654 2 0.23374698496583526 0.00039635354736424893 0.00043938930644525577 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 90928 11695 REYQDLLNV True NCI_RA007_Epitope_Rep5 1148.5825871653199 1148.5814899358602 51.639 2 0.23373422653623238 0.00039635354736424893 0.00043951810566765005 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 138473 14181 YHQPAPIAQL True PC9_epitope_Rep1 1136.5978433066398 1136.59674993586 59.369 2 0.23373368775910813 0.00039635354736424893 0.00043952354557753333 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF'] 141210 9377 YTADGKEVLEY True H1975_Epitope_Rep2 1286.6030478263801 1286.6019499358601 41.031 2 0.23373176216974198 0.00039635354736424893 0.0004395429883667631 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 24105 9777 EYPDRIM[Oxidation]NTF True NCI_RA007_Epitope_Rep5 1300.57578791316 1300.57468993586 44.254 2 0.23370942543864537 0.00039635354736424893 0.00043976858671707975 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 138576 10095 YIDEQFERY True H1975_Epitope_Rep2 1261.5615173675699 1261.5604299358602 43.825 2 0.23370712647276887 0.00039635354736424893 0.0004397918125930257 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 90851 9066 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 39.826 3 0.2337002488361315 0.00039635354736424893 0.0004398613029791352 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 105844 8555 SSLNLRETNLD True NCI_RA007_Epitope_Rep5 1260.63099390972 1260.62988993586 39.591 2 0.23366580339141027 0.00039635354736424893 0.0004402094992276527 ['ENSG00000026025|ENST00000544301|VIM'] 57219 10507 LDVTSVEDYK True NCI_RA007_Epitope_Rep1 1167.5659340416698 1167.5648299358602 44.852 2 0.233658055804786 0.00039635354736424893 0.0004402878547947062 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 26458 12495 FIDHDITSQLY True H1975_Epitope_Rep1 1350.6455813447 1350.64448993586 53.102 2 0.23365800295402536 0.00039635354736424893 0.0004402883893513019 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 72501 9195 MLDSHEELY True H1975_Epitope_Rep2 1135.48557554599 1135.48446993586 40.321 2 0.23364602718322353 0.00039635354736424893 0.00044040953452577255 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 23878 10422 EYIRSLNQF True NCI_RA007_Epitope_Rep3 1168.58767254576 1168.58656993586 48.064 2 0.2336432284075372 0.00039635354736424893 0.0004404378513580287 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 54489 19127 KYIDFDHVF True PC9_epitope_Rep2 1182.57095985246 1182.5693249037902 78.942 3 0.2336390448490804 0.00039635354736424893 0.0004404801822439499 ['ENSG00000007545|ENST00000397412|CRAMP1'] 65752 6709 LSDDHGASWRY True H1975_Epitope_Rep2 1305.5738133867699 1305.57217490379 30.718 3 0.23358341653596623 0.00039635354736424893 0.00044104343942841397 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 137477 9331 YEEDSYSHIMA True H1975_Epitope_Rep2 1343.53398229039 1343.53288993586 40.852 2 0.23357252490387329 0.00039635354736424893 0.00044115380577240616 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 6837 16392 AQFEHTILL True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 75.442 2 0.23356886110176753 0.00039635354736424893 0.0004411909377891239 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 14549 6884 DTSRPLGDSM[Oxidation]Y True H1975_Epitope_Rep2 1256.5343170239998 1256.5332099358602 31.4 2 0.23356256366651135 0.00039635354736424893 0.0004412547685598022 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 11803 7315 DHFASVHSV True PC9_epitope_Rep3 997.46174375665 997.46064993586 33.143 2 0.2335499700600419 0.00039635354736424893 0.0004413824450775295 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 118597 16339 TYRNVMEQF True PC9_epitope_Rep1 1186.54409348162 1186.54298993586 67.666 2 0.2335369300400906 0.00039635354736424893 0.00044151468647828817 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 71068 10505 LYLDEAHSI True NCI_RA007_Epitope_Rep5 1059.52367530687 1059.52256993586 47.04 2 0.23353004361399562 0.00039635354736424893 0.0004415845391126414 ['ENSG00000100596|ENST00000216484|SPTLC2'] 35389 6667 GSDDTELRY True H1975_Epitope_Rep3 1054.45671794586 1054.45562993586 30.599 2 0.2335181471503431 0.00039635354736424893 0.0004417052373070668 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'ENST00000487284.2_1_7:101917466-101926379:+|nuORF'] 28974 13277 FTDVNSILRY True H1975_Epitope_Rep3 1226.62953735774 1226.62844993586 56.327 2 0.2335042869517659 0.00039635354736424893 0.0004418459007471271 ['ENSG00000136628|ENST00000366923|EPRS1'] 72664 5281 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 25.374 2 0.23349932107238636 0.00039635354736424893 0.00044189630905916563 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 89585 13022 QYNPKFQTL True PC9_epitope_Rep1 1137.58185888933 1137.5807699358602 54.959 2 0.2334434708695726 0.00039635354736424893 0.00044246363821894556 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 54053 15421 KVIEGLDTGL True PC9_epitope_Rep2 1043.5862755634298 1043.5851699358602 64.596 2 0.2334326319350433 0.00039635354736424893 0.0004425738252901381 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 40841 8427 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48724993586 37.398 2 0.23342997104241736 0.00039635354736424893 0.00044260087975518696 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 28363 13878 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62262993586 58.221 2 0.23342845839947235 0.00039635354736424893 0.0004426162602005862 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 18906 8542 ELEDSTLRY True H1975_Epitope_Rep1 1124.5349682665599 1124.5338699358601 37.783 2 0.23342626896277915 0.00039635354736424893 0.00044263852318612894 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 70316 8223 LVSESSDVLPK True NCI_RA007_Epitope_Rep2 1172.6288686514001 1172.6277699358602 36.623 2 0.2333977397744936 0.00039635354736424893 0.0004429287210136504 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 11694 10657 DGYDYDGYR True PC9_epitope_Rep2 1122.42541781758 1122.4243299358602 46.304 2 0.2333782362803764 0.00039635354736424893 0.0004431272196493656 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 54896 11311 KYPNVFKKI True PC9_epitope_Rep1 1135.67536535135 1135.67371490379 48.388 3 0.23336715152606727 0.00039635354736424893 0.00044324007554235364 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 87904 11246 QRIIQQETL True PC9_epitope_Rep5 1127.62987171091 1127.6287699358602 48.249 2 0.23335467634872062 0.00039635354736424893 0.0004433671220693685 ['ENSG00000180182|ENST00000324817|MED14'] 26850 11947 FLDDGHTFNY True H1975_Epitope_Rep3 1227.51965255559 1227.5185499358602 51.11 2 0.2333535942399129 0.00039635354736424893 0.00044337814392817723 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 120205 9117 VEAQLQELQVK True H1975_Epitope_Rep3 1283.7085159544297 1283.7074099358601 40.057 2 0.23333656172066242 0.00039635354736424893 0.000443551665491725 ['ENSG00000100345|ENST00000216181|MYH9'] 68320 13084 LTELMFEHY True H1975_Epitope_Rep1 1181.54269649929 1181.5415899358602 55.416 2 0.23332285243071818 0.00039635354736424893 0.00044369138059739384 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 24046 15828 EYNNNFHVL True PC9_epitope_Rep3 1148.5250722892001 1148.5239699358601 66.037 2 0.2333183704600599 0.00039635354736424893 0.0004437370671557013 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 68216 9569 LTDYLKNTY True H1975_Epitope_Rep3 1129.56554011885 1129.56444993586 41.816 2 0.23331795583627138 0.00039635354736424893 0.00044374129382386584 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000461836.5_1_2:162903409-162929972:-|nuORF'] 29124 12683 FTLSHITQL True H1975_Epitope_Rep1 1058.5760452329 1058.57494993586 53.841 2 0.23331174496400872 0.00039635354736424893 0.0004438046121886354 ['ENSG00000148484|ENST00000345264|RSU1'] 139975 8604 YQDPDATSLKY True H1975_Epitope_Rep3 1299.59829679911 1299.5971899358601 38.087 2 0.233296471782779 0.00039635354736424893 0.0004439603571880737 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 129378 7574 VRDQTELRL True PC9_epitope_Rep4 1128.62512068364 1128.6234749037899 36.512 3 0.23327372987727782 0.00039635354736424893 0.00044419236451307217 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1'] 67973 10604 LTDEGYEHFY True H1975_Epitope_Rep1 1272.52988288612 1272.52878993586 45.742 2 0.23327207126702454 0.00039635354736424893 0.00044420929000474487 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 22275 12126 ETDEKDFYLY True H1975_Epitope_Rep2 1321.5714133449299 1321.57030993586 51.726 2 0.23325602452509092 0.00039635354736424893 0.0004443730743619764 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 108561 21338 SYNNFFRMF True PC9_epitope_Rep2 1224.53861417836 1224.53750993586 87.543 2 0.233252233331303 0.00039635354736424893 0.00044441177880378375 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 92858 10343 RPFEDQTSL True PC9_epitope_Rep4 1091.52473793603 1091.52364993586 47.478 2 0.23324945935381391 0.00039635354736424893 0.0004444401005880709 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 118247 14608 TYLEKAIKI True PC9_epitope_Rep3 1077.6433965167298 1077.6422899358602 61.321 2 0.23324466582704834 0.00039635354736424893 0.0004444890458554033 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 39495 6449 HLDTLTEHY True H1975_Epitope_Rep2 1127.52473793603 1127.52364993586 29.726 2 0.23323582486093491 0.00039635354736424893 0.0004445793324983847 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 6928 16090 AQIKEMVEL True PC9_epitope_Rep1 1059.56343194387 1059.5623299358601 66.707 2 0.23323408930971348 0.00039635354736424893 0.0004445970586370455 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 68102 14059 LTDPAIVKV True PC9_epitope_Rep5 954.57498260374 954.57388993586 59.092 2 0.23320172472582146 0.00039635354736424893 0.0004449277458418419 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 31676 10010 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51676993586 46.466 2 0.2331827984214616 0.00039635354736424893 0.00044512124088828163 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 14407 17217 DTDIVDEAIYY True H1975_Epitope_Rep2 1315.58197802863 1315.5808899358601 71.515 2 0.2331669599908057 0.00039635354736424893 0.0004452832316141035 ['ENSG00000111229|ENST00000228825|ARPC3'] 80094 17989 PFLQASPHF True PC9_epitope_Rep5 1042.5236157372199 1042.5225099358602 74.211 2 0.23316469473824927 0.00039635354736424893 0.0004453064047723361 ['ENSG00000147689|ENST00000690554|FAM83A'] 78160 18529 NYAQVLDKF True PC9_epitope_Rep2 1096.5553097883198 1096.5542099358602 76.62 2 0.23316011866097094 0.00039635354736424893 0.0004453532209749727 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 54886 13804 KYPLLLQSI True NCI_RA007_Epitope_Rep3 1073.6484818971699 1073.64738993586 61.625 2 0.23315131502689695 0.00039635354736424893 0.0004454433016794193 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1', 'nc|ENSG00000076928|Q92888-4|ARHGEF1', 'ENST00000595897.5_1_19:42402462-42407822:+|nuORF'] 106397 10654 STIFYYVQK True NCI_RA007_Epitope_Rep3 1147.5913609438696 1147.59026993586 48.956 2 0.23314238741291532 0.00039635354736424893 0.00044553466963926665 ['ENSG00000092148|ENST00000399332|HECTD1'] 138062 14431 YGEPGEVFINK True PC9_epitope_Rep5 1251.6135529404298 1251.61244993586 60.508 2 0.23313732104026283 0.00039635354736424893 0.00044558652882395857 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 133982 7434 VYISEHEHF True NCI_RA007_Epitope_Rep1 1159.5298233164701 1159.5287299358602 32.914 2 0.23313501026500147 0.00039635354736424893 0.0004456101838364017 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 21945 10479 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4818899358602 45.325 2 0.23313407614221007 0.00039635354736424893 0.00044561974664973365 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 54177 5341 KVTEGSFVYK True NCI_RA007_Epitope_Rep3 1156.61282466444 1156.61116490379 28.017 3 0.23312615998974484 0.00039635354736424893 0.00044570079424812364 ['ENSG00000057608|ENST00000380191|GDI2'] 48101 21387 IYNGKLFDLL True PC9_epitope_Rep2 1194.6648602373 1194.66376993586 87.736 2 0.23311506604966678 0.00039635354736424893 0.0004458144017340937 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 106199 6045 STDSETLRY True H1975_Epitope_Rep3 1070.48801807414 1070.4869299358602 28.266 2 0.2331147952240524 0.00039635354736424893 0.00044581717548682396 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 106953 6483 SVEAAAELSAK True NCI_RA007_Epitope_Rep2 1074.55570371114 1074.55460993586 29.827 2 0.23311133780872803 0.00039635354736424893 0.0004458525873041849 ['ENSG00000159335|ENST00000309083|PTMS'] 77392 13363 NSFVNDIFER True H1975_Epitope_Rep1 1239.5884008217497 1239.58730993586 56.51 2 0.2331065287902456 0.00039635354736424893 0.00044590184731211415 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 133522 20654 VWMRSPLSTF True PC9_epitope_Rep3 1222.61686449906 1222.61576993586 84.717 2 0.23309878214945173 0.00039635354736424893 0.0004459812096189289 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 55138 17883 LAAEFLKQV True PC9_epitope_Rep5 1017.5858816406097 1017.58478993586 73.804 2 0.23309713564946122 0.00039635354736424893 0.0004459980794060748 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 82944 4316 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 21.718 3 0.23309471553311378 0.00039635354736424893 0.0004460228767100852 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 72497 7905 M[Oxidation]LDSHEELY True H1975_Epitope_Rep2 1151.48049054599 1151.4793899358601 35.354 2 0.2330943710418143 0.00039635354736424893 0.0004460264065931119 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 28524 8151 FSEEQLNRY True H1975_Epitope_Rep1 1184.5462016565998 1184.5451099358602 36.293 2 0.23306241503058336 0.00039635354736424893 0.00044635397067492556 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 73357 13980 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 58.921 2 0.23304602025620988 0.00039635354736424893 0.00044652211844453703 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 48939 9061 KEEELQAALAR True PC9_epitope_Rep1 1256.67246479888 1256.6708249037902 39.704 3 0.2330221864696714 0.00039635354736424893 0.0004467666754082518 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 12183 15011 DIFEAQIAGLR True NCI_RA007_Epitope_Rep1 1231.6560864587498 1231.6549899358602 62.454 2 0.2330148644314338 0.00039635354736424893 0.00044684183335234195 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 28292 17850 FRQEYLDTL True PC9_epitope_Rep1 1183.5873381925896 1183.58624993586 73.454 2 0.23301055153891878 0.00039635354736424893 0.0004468861094930939 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 73759 12964 NAENEFVTIK True PC9_epitope_Rep3 1163.58225281215 1163.5811499358601 54.891 2 0.23301013383840516 0.00039635354736424893 0.0004468903978389822 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 98153 4085 SESPKEPEQLR True NCI_RA007_Epitope_Rep2 1298.64664397386 1298.6455499358601 20.528 2 0.23300571583086663 0.00039635354736424893 0.0004469357580901428 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 54346 21086 KYEELFPAF True PC9_epitope_Rep1 1142.5648118428596 1142.56370993586 85.937 2 0.2330052780594235 0.00039635354736424893 0.0004469402529973039 ['ENSG00000105402|ENST00000263354|NAPA'] 106102 9973 STDGKHWWEY True H1975_Epitope_Rep1 1307.5571006934701 1307.5560099358602 43.297 2 0.23299308876767108 0.00039635354736424893 0.00044706542723704676 ['ENSG00000129315|ENST00000261900|CCNT1'] 19435 10333 ELNEFLTR True NCI_RA007_Epitope_Rep2 1020.52400966004 1020.52290993586 44.784 2 0.23298782513924382 0.00039635354736424893 0.0004471194913465703 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 13895 7245 DQVANSAFVER True NCI_RA007_Epitope_Rep5 1234.59421447818 1234.5931099358602 34.545 2 0.23297899612233913 0.00039635354736424893 0.0004472101912249229 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 4435 11866 AIRLELQGPR True PC9_epitope_Rep5 1151.6774906096698 1151.67583490379 50.641 3 0.23296837581510707 0.00039635354736424893 0.00044731931735883003 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 62152 12804 LLEKEILYY True H1975_Epitope_Rep3 1182.6536268472598 1182.65252993586 54.467 2 0.2329628073388996 0.00039635354736424893 0.0004473765454251535 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 119758 14880 VAYKFPELL True H1975_Epitope_Rep2 1078.60628273202 1078.6051899358602 62.389 2 0.2329625732764998 0.00039635354736424893 0.00044737895108043306 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-3|UBR2'] 23740 13254 EYGFQNALIVR True NCI_RA007_Epitope_Rep1 1308.68263555976 1308.68152993586 55.555 2 0.23296143958426777 0.00039635354736424893 0.00044739060316846676 ['CON__P02769'] 78374 14614 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6069699358602 61.213 2 0.23295896211264217 0.00039635354736424893 0.00044741606767984964 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 95944 13076 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.6154299358602 55.303 2 0.2329565733292105 0.00039635354736424893 0.00044744062199292777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 139972 16384 YQDLLQLQY True H1975_Epitope_Rep2 1182.5920892198599 1182.59098993586 68.242 2 0.2329510453320166 0.00039635354736424893 0.0004474974494789522 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENST00000561086.1_1_15:91040446-91043337:+|nuORF', 'ENSG00000140575|ENST00000268182|IQGAP1'] 14357 5286 DSYVGDEAQSK True PC9_epitope_Rep5 1197.51496109797 1197.5138699358602 25.348 2 0.23294781137392603 0.00039635354736424893 0.0004475306977346413 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 41491 14046 HYM[Oxidation]PPPYASL True PC9_epitope_Rep2 1190.5430312328997 1190.54192993586 59.308 2 0.23292852036126405 0.00039635354736424893 0.0004477290797200198 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 53790 11409 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep3 1213.59004099497 1213.58894993586 49.001 2 0.23291985910087035 0.00039635354736424893 0.00044781817776691545 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 118282 21654 TYLPREILNLI True PC9_epitope_Rep4 1343.7812869718698 1343.78018993586 91.484 2 0.232899217750108 0.00039635354736424893 0.0004480305862458474 ['ENSG00000163428|ENST00000295628|LRRC58'] 104365 21018 SQITPHAIIFL True PC9_epitope_Rep1 1238.7023083751799 1238.70120993586 85.674 2 0.23289435844358783 0.00039635354736424893 0.0004480806053192807 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 139078 15075 YLDDPTNSWY True H1975_Epitope_Rep3 1272.52988288612 1272.52878993586 63.381 2 0.2328760193257369 0.00039635354736424893 0.0004482694287514853 ['ENSG00000064195|ENST00000434704|DLX3'] 31426 12254 GEAELNWSRL True H1975_Epitope_Rep2 1173.57783613805 1173.5767299358602 52.217 2 0.23286782360653693 0.00039635354736424893 0.0004483538394134606 ['ENSG00000163428|ENST00000295628|LRRC58'] 11997 6645 DHQREITSL True PC9_epitope_Rep2 1097.54653600977 1097.54542993586 30.969 2 0.23285528576938497 0.00039635354736424893 0.000448483001966796 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1'] 89670 8574 QYVTQINRL True NCI_RA007_Epitope_Rep3 1133.61930702721 1133.61820993586 40.797 2 0.23284190260410334 0.00039635354736424893 0.0004486209141265004 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 86000 10833 QHLQATGVSL True PC9_epitope_Rep2 1052.56145779792 1052.56036993586 46.988 2 0.23283850912784237 0.00039635354736424893 0.0004486558903157472 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 26527 13287 FIGNLNTLVVK True NCI_RA007_Epitope_Rep2 1216.71795843932 1216.7168699358601 56.318 2 0.23281212643584923 0.00039635354736424893 0.00044892790716302987 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 22322 8876 ETDNMFNRY True H1975_Epitope_Rep3 1188.48697252832 1188.4858699358601 39.142 2 0.2327981506723342 0.00039635354736424893 0.0004490720702944874 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 142750 18637 YYQNYFEKL True PC9_epitope_Rep2 1266.5920892198599 1266.59098993586 77.052 2 0.23279137682744389 0.00039635354736424893 0.00044914196073079664 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 134560 18504 VYSEAARVLQF True PC9_epitope_Rep4 1281.67173652289 1281.67062993586 79.248 2 0.2327760090415913 0.00039635354736424893 0.00044930056125323554 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 12889 13448 DLINNLGTIAK True NCI_RA007_Epitope_Rep1 1170.66083748602 1170.6597499358602 56.313 2 0.23277458822083583 0.00039635354736424893 0.00044931522742012417 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 70772 13754 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.5542099358602 57.927 2 0.23277330510201022 0.00039635354736424893 0.00044932847259628137 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 74499 9384 NFGIGQDIQPK True NCI_RA007_Epitope_Rep5 1215.62478633047 1215.62368993586 42.735 2 0.23276437549303897 0.00039635354736424893 0.00044942066060064614 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 115760 6585 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 30.284 2 0.23273086472597337 0.00039635354736424893 0.00044976679020408044 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 103170 12877 SPIENIQRVA True PC9_epitope_Rep5 1125.6142216467701 1125.6131299358601 54.541 2 0.23271791228542985 0.00039635354736424893 0.0004499006464067022 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 73319 9468 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 41.387 2 0.2327048544331649 0.00039635354736424893 0.00045003563243308707 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 54979 7201 KYQEVTNNL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 36.786 2 0.23269795045298233 0.00039635354736424893 0.00045010701900008036 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 43719 11793 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 50.377 2 0.23269509778598035 0.00039635354736424893 0.00045013651865030767 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 72677 5273 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 25.365 2 0.2326944123721955 0.00039635354736424893 0.0004501436068562832 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 140765 12724 YSDFPFHEDY True H1975_Epitope_Rep3 1318.51423282198 1318.5131299358602 54.153 2 0.23268582318678357 0.00039635354736424893 0.00045023244140251166 ['FMO4|p.S512Yfs*4|1|0.05|ENSG00000076258|chr1:171341697-171341697|C/-|frameshift_variant', 'ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 72676 5180 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 25.021 2 0.2326856838397386 0.00039635354736424893 0.00045023388275882814 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 133660 9067 VYANGIRNI True PC9_epitope_Rep6 1018.5559784946599 1018.55488993586 44.939 2 0.23267681182981378 0.00039635354736424893 0.00045032566120689095 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 24047 15925 EYNNNFHVL True PC9_epitope_Rep3 1148.5250722892001 1148.5239699358601 66.403 2 0.23265553059773358 0.00039635354736424893 0.0004505458860786849 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 97686 13781 SEIDLLDIR True H1975_Epitope_Rep3 1072.57643915572 1072.57534993586 58.312 2 0.23264178226620583 0.00039635354736424893 0.0004506882155706912 ['ENSG00000138772|ENST00000264908|ANXA3', 'ENST00000505805.1_1_4:79518453-79531266:+|nuORF', 'ANXA3|p.E290Q|1|0.06|ENSG00000138772|chr4:78604355-78604355|G/C|missense_variant'] 11458 17955 DFDLLEDIESK True NCI_RA007_Epitope_Rep1 1322.62417719378 1322.6230899358602 73.978 2 0.2326064355546365 0.00039635354736424893 0.0004510543492073044 ['ENSG00000079246|ENST00000392132|XRCC5', 'ENST00000429133.5_1_2:216974075-216982480:+|nuORF', 'ENST00000476360.1_1_2:216974075-216981630:+|nuORF'] 41262 7267 HVLVTLGEK True PC9_epitope_Rep2 994.58113061334 994.58002993586 33.34 2 0.23259131606990024 0.00039635354736424893 0.0004512110532341563 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 142709 17169 YYQEYPM[Oxidation]SI True PC9_epitope_Rep1 1208.5059770178398 1208.5048699358601 70.861 2 0.2325853948593643 0.00039635354736424893 0.00045127243776874515 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 86998 15871 QMEPAAFQALY True H1975_Epitope_Rep2 1267.59070932087 1267.5896099358602 66.248 2 0.2325755715781412 0.00039635354736424893 0.0004513742931167576 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 120209 13180 VEAQLQELQVK True PC9_epitope_Rep2 1283.7085159544297 1283.7074099358601 55.971 2 0.23257009944232307 0.00039635354736424893 0.00045143104243840654 ['ENSG00000100345|ENST00000216181|MYH9'] 134312 15378 VYNSEYYHF True PC9_epitope_Rep2 1220.5138388991602 1220.51274993586 64.433 2 0.23255602348322796 0.00039635354736424893 0.0004515770514412042 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 2383 4455 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 22.25 2 0.2325483679105366 0.00039635354736424893 0.0004516564820845142 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 137514 6804 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 31.089 2 0.23254689469753173 0.00039635354736424893 0.0004516717690619605 ['ENSG00000127184|ENST00000247655|COX7C'] 80180 21229 PFVDHVFTF True PC9_epitope_Rep1 1107.53893144819 1107.5378299358601 86.481 2 0.2325433361773383 0.00039635354736424893 0.0004517086966291965 ['ENSG00000113460|ENST00000336767|BRIX1'] 27707 7187 FPLTTESAM[Oxidation]K True NCI_RA007_Epitope_Rep5 1139.55326156343 1139.55216993586 34.323 2 0.23254095061619764 0.00039635354736424893 0.00045173345383132816 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF'] 44528 12110 ILMEHIHKL True PC9_epitope_Rep3 1132.64268532408 1132.64104490379 51.625 3 0.2325111857800456 0.00039635354736424893 0.00045204246588201823 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 109405 8180 TDEELSFRA True H1975_Epitope_Rep2 1066.49310345458 1066.49200993586 36.415 2 0.2325073417597113 0.00039635354736424893 0.00045208238912278757 ['ENSG00000101213|ENST00000542869|PTK6', 'nc|ENSG00000101213|Q13882-2|PTK6'] 26164 20299 FHDDWISSI True PC9_epitope_Rep2 1118.5032742154601 1118.5021699358601 83.502 2 0.23249291559637453 0.00039635354736424893 0.000452232247972325 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 15033 8451 DYMKTTSNF True NCI_RA007_Epitope_Rep4 1105.47501086229 1105.47390993586 39.323 2 0.2324876294290115 0.00039635354736424893 0.00045228717310436483 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 7651 7634 ASIHEAWTDGK True PC9_epitope_Rep1 1213.57275075761 1213.57111490379 34.186 3 0.2324847155399498 0.00039635354736424893 0.0004523174522942847 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 138081 11974 YGFQNALIVR True H1975_Epitope_Rep1 1179.6400424717897 1179.6389499358602 51.064 2 0.23247737426882378 0.00039635354736424893 0.0004523937468988448 ['CON__P02769'] 48959 6425 KEENPEIAVSA True H1975_Epitope_Rep2 1185.5877321154098 1185.5866299358602 29.634 2 0.23246992444580383 0.00039635354736424893 0.0004524711828331567 ['ENST00000487143.5_1_2:168812008-168969496:-|nuORF', 'nc|ENSG00000198648|Q9UEW8-2|STK39', 'ENSG00000198648|ENST00000355999|STK39'] 38402 5457 HEM[Oxidation]FPAVHAA True H1975_Epitope_Rep2 1124.50731443052 1124.5062099358602 26.017 2 0.23246150639731752 0.00039635354736424893 0.0004525586988258563 ['ENSG00000113638|ENST00000337702|TTC33'] 57308 6689 LEAAIADAEQR True H1975_Epitope_Rep1 1185.59896550545 1185.5978699358602 30.778 2 0.23243891663361405 0.00039635354736424893 0.0004527936312048534 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 87681 19671 QQVQRLPFL True PC9_epitope_Rep1 1127.64512785223 1127.64402993586 80.488 2 0.23243335056704817 0.00039635354736424893 0.0004528515367947646 ['ENSG00000132963|ENST00000380842|POMP'] 17698 7595 EHNDLQYAA True PC9_epitope_Rep1 1059.46213767947 1059.46104993586 34.036 2 0.2324259323644699 0.00039635354736424893 0.0004529287223025729 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 138823 20091 YIYDKDMEII True PC9_epitope_Rep5 1301.6213407428097 1301.62024993586 82.33 2 0.23241888381267403 0.00039635354736424893 0.00045300207386579167 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 48034 21582 IYLPYLHEW True PC9_epitope_Rep5 1232.62299542532 1232.62188993586 88.055 2 0.23241255080005316 0.00039635354736424893 0.000453067989252165 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 8870 21140 AVFPDDMPTL True PC9_epitope_Rep4 1104.51614739828 1104.5150499358601 89.478 2 0.23240917230897445 0.00039635354736424893 0.0004531031572648828 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 95973 12069 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64422490379 51.736 3 0.23238533990056998 0.00039635354736424893 0.00045335131577404407 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 40915 15170 HSQFLGYPITL True NCI_RA007_Epitope_Rep2 1274.6659228664598 1274.66482993586 63.7 2 0.2323802694596832 0.00039635354736424893 0.0004534041300837117 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 35639 6472 GTDGQGGTFRY True H1975_Epitope_Rep2 1157.5101505010498 1157.50904993586 29.811 2 0.23237965714950143 0.00039635354736424893 0.000453410508396383 ['ENST00000487931.1_1_1:78444877-78481928:+|nuORF', 'ENSG00000162616|ENST00000370763|DNAJB4'] 142738 15591 YYQHIVTTL True PC9_epitope_Rep3 1136.5866099166 1136.58550993586 65.118 2 0.2323676734014969 0.00039635354736424893 0.0004535353588236211 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 78145 12809 NYAFLHRTL True PC9_epitope_Rep2 1133.59817765981 1133.5970899358601 54.571 2 0.2323182510269309 0.00039635354736424893 0.00045405062106084067 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 77069 19365 NRLEEPGNFVL True PC9_epitope_Rep1 1286.6619001151798 1286.66080993586 79.294 2 0.23231055387881702 0.00039635354736424893 0.0004541309219576045 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 16769 4383 EETQPPVALKK True H1975_Epitope_Rep3 1238.6870522338597 1238.6854049037902 21.979 3 0.23227816629394707 0.00039635354736424893 0.0004544689632387165 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000510079.2_1_4:79102753-79102939:-|nuORF'] 108343 13843 SYLDRTEQL True PC9_epitope_Rep1 1123.55095268387 1123.54984993586 58.091 2 0.23227301314070625 0.00039635354736424893 0.00045452277188973215 ['ENSG00000065268|ENST00000585809|WDR18'] 106210 7057 STDVSQPPHVY True H1975_Epitope_Rep3 1228.5724164044402 1228.5713099358602 32.11 2 0.23225304966198707 0.00039635354736424893 0.00045473128865276493 ['nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENSG00000086200|ENST00000325324|IPO11', 'ENST00000502862.1_1_5:61811283-61822085:+|nuORF'] 131642 5857 VTLTSEEEAR True NCI_RA007_Epitope_Rep1 1133.5564319871298 1133.55532993586 26.835 2 0.23225160099653758 0.00039635354736424893 0.0004547464235687496 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 14384 7501 DTDDEIAKY True H1975_Epitope_Rep2 1068.46113461996 1068.4600299358601 33.803 2 0.23224213222850812 0.00039635354736424893 0.0004548453608630607 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'ENST00000503126.1_1_5:179133324-179137021:+|nuORF'] 454 15294 AALQELLSK True PC9_epitope_Rep2 971.5651461960299 971.56404993586 64.107 2 0.23223892369362478 0.00039635354736424893 0.0004548788911109156 ['ENSG00000118181|ENST00000527673|RPS25'] 75571 9219 NLDDGIDDER True PC9_epitope_Rep3 1160.49456000656 1160.49346993586 40.4 2 0.23221238009990908 0.00039635354736424893 0.00045515637554717036 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 57274 5280 LDYQESPPGK True H1975_Epitope_Rep3 1132.540053647 1132.53894993586 25.392 2 0.23219773530876311 0.00039635354736424893 0.0004553095436116973 ['CON__Q3T052'] 95696 5319 RYFKTPRKF True NCI_RA007_Epitope_Rep4 1241.7033114346898 1241.70166490379 27.021 3 0.2321871966594112 0.00039635354736424893 0.0004554197980379577 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 37758 19333 GWYDEEHPLVF True PC9_epitope_Rep6 1390.6193665968601 1390.61826993586 87.013 2 0.2321757813408356 0.00039635354736424893 0.00045553925431913837 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 3873 14968 AGYTDNLVRV True PC9_epitope_Rep1 1106.57202248162 1106.57092993586 62.395 2 0.2321749392998184 0.00039635354736424893 0.0004555480671522501 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 118532 7729 TYQEVAQKF True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.54912993586 37.526 2 0.23217081889616054 0.00039635354736424893 0.0004555911939189071 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 73838 16058 NALRELETV True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 66.581 2 0.23213219046528166 0.00039635354736424893 0.00045599570289780897 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000489129.5_1_15:63032816-63046163:+|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 77629 9096 NTERTVWQY True H1975_Epitope_Rep2 1195.56218607391 1195.56108993586 39.938 2 0.2321250491623438 0.00039635354736424893 0.000456070524604613 ['nc|ENSG00000179295|Q06124-3|PTPN11', 'ENSG00000179295|ENST00000351677|PTPN11', 'nc|ENSG00000179295|Q06124-1|PTPN11'] 24265 18184 EYTDVLQKI True PC9_epitope_Rep2 1107.58119018299 1107.58008993586 75.253 2 0.2321175041038808 0.00039635354736424893 0.00045614958996712684 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 111493 16893 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62844993586 70.224 2 0.232108704548541 0.00039635354736424893 0.0004562418186882074 ['ENSG00000076003|ENST00000264156|MCM6'] 49141 8172 KELDYGSMTEA True H1975_Epitope_Rep2 1242.5438186980998 1242.54272993586 36.385 2 0.2321000695592412 0.00039635354736424893 0.00045633234076731833 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 136763 19114 WYQTKFETL True PC9_epitope_Rep1 1214.5971746002997 1214.5960699358602 78.312 2 0.2320863151596934 0.00039635354736424893 0.00045647656771379875 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 53840 4621 KTFTKWVNK True NCI_RA007_Epitope_Rep4 1150.6498788795 1150.6482449037899 24.19 3 0.23208254269400383 0.00039635354736424893 0.0004565161333168148 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant', 'ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'MACF1|p.S820Afs*39|1|0.14|ENSG00000127603|chr1:39297705-39297705|C/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'ENST00000467673.5_1_1:39571193-39720158:+|nuORF'] 92519 21083 RLYPWGVVEV True PC9_epitope_Rep1 1216.6604435631998 1216.65934993586 85.928 2 0.2320697269478684 0.00039635354736424893 0.00045665057050163 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 111099 13409 THDYPYSL True PC9_epitope_Rep5 994.43961132974 994.43850993586 56.594 2 0.23205683846242256 0.00039635354736424893 0.0004567858107765774 ['ENSG00000119777|ENST00000238788|TMEM214'] 91070 20645 RFLNDPGHLLW True PC9_epitope_Rep5 1366.7146043943799 1366.71295490379 84.464 3 0.23205673894553008 0.00039635354736424893 0.0004567868551744229 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 46040 13897 ISGLIYEETR True PC9_epitope_Rep5 1179.6135529404298 1179.61244993586 58.475 2 0.2320555521313331 0.00039635354736424893 0.0004567993105931388 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 108513 17541 SYMLVNENRF True PC9_epitope_Rep1 1271.5968573304701 1271.59576993586 72.265 2 0.23205078381304337 0.00039635354736424893 0.00045684935673943715 ['ENSG00000182195|ENST00000370526|LDOC1'] 8021 7741 ATDLTREVY True H1975_Epitope_Rep1 1066.5294889632999 1066.52838993586 34.735 2 0.23205017430457037 0.00039635354736424893 0.0004568557542655359 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 139066 10473 YLDDPDLKY True H1975_Epitope_Rep2 1140.5339056374 1140.53280993586 45.302 2 0.23204433758320703 0.00039635354736424893 0.00045691702224286997 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 138497 13185 YHSEVPVSL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 58.613 2 0.23203618603418513 0.00039635354736424893 0.000457002602726464 ['ENSG00000115306|ENST00000356805|SPTBN1'] 4872 5423 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep2 1219.5754535599897 1219.57434993586 25.714 2 0.23203135943481656 0.00039635354736424893 0.0004570532832154971 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 116235 14296 TTDELEKLLY True H1975_Epitope_Rep2 1223.62853429823 1223.6274299358602 60.14 2 0.232013499692964 0.00039635354736424893 0.00045724086396534 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant'] 61991 20663 LLDPNVKSIFV True PC9_epitope_Rep3 1243.71762408615 1243.71652993586 84.753 2 0.23201335238271933 0.00039635354736424893 0.0004572424114849508 ['ENSG00000117419|ENST00000372257|ERI3', 'nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3'] 74046 12713 NDLAVVDVR True PC9_epitope_Rep3 999.53490869691 999.53380993586 53.923 2 0.23199577179411776 0.00039635354736424893 0.0004574271363469559 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 35638 6372 GTDGQGGTFRY True H1975_Epitope_Rep2 1157.5101505010498 1157.50904993586 29.437 2 0.23199214240223276 0.00039635354736424893 0.00045746528084938736 ['ENST00000487931.1_1_1:78444877-78481928:+|nuORF', 'ENSG00000162616|ENST00000370763|DNAJB4'] 112433 8615 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.5120699358602 38.094 2 0.23198976321980205 0.00039635354736424893 0.000457490287521902 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 54665 12719 KYLSVQGQLF True NCI_RA007_Epitope_Rep1 1181.64445914589 1181.6433699358602 53.459 2 0.2319873825398793 0.00039635354736424893 0.00045751531130658714 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 97144 7333 SDQDYILK True H1975_Epitope_Rep3 980.4814761417199 980.48036993586 33.182 2 0.23197525231337723 0.00039635354736424893 0.0004576428357751856 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000550166.1_1_12:56500490-56500880:+|nuORF'] 6926 13549 AQIKELEEL True PC9_epitope_Rep6 1071.58119018299 1071.58008993586 63.847 2 0.23196763117525626 0.00039635354736424893 0.0004577229746605352 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'NUMA1|p.E1073K|1|0.19|ENSG00000137497|chr11:72014286-72014286|C/T|missense_variant'] 78163 19176 NYAQVLDKF True PC9_epitope_Rep5 1096.5553097883198 1096.5542099358602 78.797 2 0.23196160770245164 0.00039635354736424893 0.00045778632350663973 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 120204 9157 VEAQLQELQVK True H1975_Epitope_Rep1 1283.7085159544297 1283.7074099358601 40.128 2 0.23195833104220903 0.00039635354736424893 0.00045782078782651676 ['ENSG00000100345|ENST00000216181|MYH9'] 121411 11158 VEVTEFEDIK True NCI_RA007_Epitope_Rep2 1207.59723416995 1207.59612993586 47.984 2 0.23193830086469566 0.00039635354736424893 0.0004580315243210068 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 137818 5678 YEQSAQAAQQV True H1975_Epitope_Rep2 1221.56257999673 1221.5614899358602 26.838 2 0.23193062384216762 0.00039635354736424893 0.0004581123196841695 ['ENSG00000196878|ENST00000356082|LAMB3'] 140790 8289 YSDKYFDEHY True H1975_Epitope_Rep2 1365.55134660669 1365.54970490379 36.835 3 0.23191674465621817 0.00039635354736424893 0.00045825842482769496 ['ENSG00000123975|ENST00000314355|CKS2'] 127312 12031 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep3 1313.6325745132897 1313.6314699358602 51.438 2 0.23190795788093715 0.00039635354736424893 0.00045835094671240265 ['CON__P02769'] 28456 14047 FSDLYNEVY True H1975_Epitope_Rep1 1148.50260550912 1148.5015099358602 59.196 2 0.2319063823992962 0.00039635354736424893 0.00045836753800260595 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 14175 13077 DSDSDLQLY True H1975_Epitope_Rep3 1054.44548455582 1054.44497496793 55.544 1 0.23189258913592492 0.00039635354736424893 0.000458512819652504 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 36923 15482 GVLQLGNIVFK True NCI_RA007_Epitope_Rep5 1186.70739375562 1186.70628993586 66.247 2 0.23189015161127735 0.00039635354736424893 0.0004585384984086289 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 40975 6283 HTDPDYSAAY True H1975_Epitope_Rep3 1138.45671794586 1138.45562993586 29.173 2 0.23188782351770887 0.00039635354736424893 0.0004585630256807595 ['ENST00000579053.5_1_18:691132-706776:-|nuORF', 'ENOSF1|p.G48Efs*22|1|0.27|ENSG00000132199|chr18:706520-706520|C/-|frameshift_variant', 'ENST00000580605.5_1_18:693172-712587:-|nuORF', 'ENST00000578651.5_1_18:683014-712587:-|nuORF', 'ENSG00000132199|ENST00000647584|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-4|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-5|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-3|ENOSF1'] 70773 13857 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.5542099358602 58.321 2 0.23187953932890296 0.00039635354736424893 0.0004586503131539106 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 71940 5980 [Acetylation]-M[Oxidation]EQVNELKEK True H1975_Epitope_Rep1 1304.6282177251398 1304.62710993586 28.073 2 0.23187332872135552 0.00039635354736424893 0.000458715762990303 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'ENST00000540736.1_1_11:63953733-63960840:+|nuORF'] 106197 6032 STDSETLRY True H1975_Epitope_Rep2 1070.48801807414 1070.4869299358602 28.18 2 0.2318382409890629 0.00039635354736424893 0.0004590857074155943 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 14400 10505 DTDHYFLRY True H1975_Epitope_Rep2 1228.5512870370399 1228.5496349037899 45.425 3 0.2318340590184656 0.00039635354736424893 0.0004591298196131147 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 14171 6027 DSDRGLQEGY True H1975_Epitope_Rep2 1138.4890807032998 1138.48798993586 28.161 2 0.23183156761117465 0.00039635354736424893 0.00045915610145809654 ['ENSG00000175931|ENST00000319380|UBE2O'] 134322 13907 VYNSEYYHF True PC9_epitope_Rep6 1220.5138388991602 1220.51274993586 65.332 2 0.23182397615886485 0.00039635354736424893 0.000459236192962508 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 107299 19690 SVLDQKILL True PC9_epitope_Rep2 1027.62774645259 1027.62664993586 81.124 2 0.23180183870992074 0.00039635354736424893 0.00045946982798899334 ['ENSG00000142207|ENST00000382751|URB1'] 28946 9164 FTDQQKLIY True H1975_Epitope_Rep1 1154.5971746002997 1154.5960699358602 40.154 2 0.23179271220502118 0.00039635354736424893 0.0004595661823427793 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 44468 18591 ILLAELEQLK True PC9_epitope_Rep6 1168.7067250492798 1168.70562993586 84.152 2 0.23178180494933137 0.00039635354736424893 0.00045968136381229597 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 118029 21813 TYEKFFGLL True PC9_epitope_Rep1 1116.5855472874398 1116.5844499358602 88.714 2 0.2317709658742927 0.00039635354736424893 0.00045979585397809314 ['ENSG00000163510|ENST00000410053|CWC22'] 118638 17172 TYSPALNKMF True PC9_epitope_Rep4 1170.5743309807401 1170.5732299358601 74.058 2 0.23172580558246958 0.00039635354736424893 0.0004602731776764498 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 41035 10972 HTILIVEKV True PC9_epitope_Rep4 1050.6437308699 1050.6426299358602 49.976 2 0.2317129435553839 0.00039635354736424893 0.00046040921436826213 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF'] 27477 11037 FMDPGPEGKLY True H1975_Epitope_Rep3 1252.579810284 1252.5787099358602 47.543 2 0.2317077175729829 0.00039635354736424893 0.0004604644990883256 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 96146 7615 RYPDNLKHL True PC9_epitope_Rep5 1154.61964138038 1154.61799490379 34.239 3 0.2316989988203815 0.00039635354736424893 0.000460556748014812 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 134305 11225 VYNSEYYHF True NCI_RA007_Epitope_Rep1 1220.5138388991602 1220.51274993586 47.66 2 0.23168391017385673 0.00039635354736424893 0.0004607164375326132 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 17358 19529 EHDDFFISL True PC9_epitope_Rep6 1121.50293986229 1121.50184993586 87.781 2 0.23167828423051343 0.00039635354736424893 0.0004607759934823496 ['ENSG00000125676|ENST00000245838|THOC2'] 115106 9071 TRDETNYGI True PC9_epitope_Rep3 1067.4883524273098 1067.48724993586 39.832 2 0.2316764969407657 0.00039635354736424893 0.00046079491525708924 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 72482 5915 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 27.823 2 0.23164827992040363 0.00039635354736424893 0.0004610937480379421 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 142867 12824 YYTKGFALL True NCI_RA007_Epitope_Rep3 1074.5749826037397 1074.57388993586 57.685 2 0.23164226176547417 0.00039635354736424893 0.0004611575085491565 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 84361 20848 PYYSKFILI True PC9_epitope_Rep2 1142.6375828603 1142.63648993586 85.639 2 0.23163956252170373 0.00039635354736424893 0.0004611861090846918 ['ENSG00000164815|ENST00000297431|ORC5'] 142358 8260 YYEHVKARF True PC9_epitope_Rep3 1211.60874234351 1211.60710490379 36.747 3 0.23163079443157047 0.00039635354736424893 0.000461279025930478 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 5787 13059 APDFVFYAPR True H1975_Epitope_Rep3 1181.5869442697697 1181.58584993586 55.471 2 0.23160871120064727 0.00039635354736424893 0.00046151312866357733 ['ENSG00000092820|ENST00000367075|EZR', 'ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 7547 10322 ASEFGNHYLY True H1975_Epitope_Rep2 1199.52473793603 1199.52364993586 44.712 2 0.23160589752276303 0.00039635354736424893 0.0004615429648185059 ['ENSG00000189091|ENST00000302516|SF3B3', 'SF3B3-CDH15|1|fusion'] 133995 6841 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5287299358602 32.999 2 0.2316052256924939 0.00039635354736424893 0.00046155008917247173 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 34170 17725 GNFNYIEFTR True PC9_epitope_Rep4 1259.5934862021898 1259.5923899358602 76.203 2 0.23158220373341468 0.00039635354736424893 0.00046179428981040236 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 49897 18669 KIIDEDGLLNL True PC9_epitope_Rep6 1241.68671788069 1241.68562993586 84.455 2 0.23156636438748296 0.00039635354736424893 0.00046196237763724115 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 106580 3844 STNPFRPQK True NCI_RA007_Epitope_Rep4 1073.56179215109 1073.5606899358602 20.986 2 0.23155133230040792 0.00039635354736424893 0.0004621219555630458 ['nc|ENSG00000133136|A0A804HLA8|GNG5B', 'ENSG00000174021|ENST00000370645|GNG5'] 67995 11211 LTDFIREEY True H1975_Epitope_Rep3 1184.57135377528 1184.5702499358601 48.222 2 0.23154854616191664 0.00039635354736424893 0.00046215153878100993 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 48355 12388 IYSTKLYRF True PC9_epitope_Rep4 1189.6495445263297 1189.64788490379 55.456 3 0.23154361294564124 0.00039635354736424893 0.0004622039243306763 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 94785 5830 RSNPYYIVK True NCI_RA007_Epitope_Rep4 1138.61349337078 1138.6123899358602 29.049 2 0.23154304232655132 0.00039635354736424893 0.0004622099840874587 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 27821 15932 FQDENHLYL True PC9_epitope_Rep2 1177.54038800017 1177.53928993586 66.531 2 0.23153506846447783 0.00039635354736424893 0.0004622946717961347 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 48144 19442 IYPHGLVLL True PC9_epitope_Rep4 1023.61170246563 1023.61060993586 82.897 2 0.23152635422752635 0.00039635354736424893 0.000462387240579181 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 26696 19885 FIVEEIQRI True PC9_epitope_Rep2 1145.6444591458899 1145.6433699358602 81.88 2 0.23151505542501788 0.00039635354736424893 0.00046250729213024867 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 32340 15288 GFGFVTFDDHD True NCI_RA007_Epitope_Rep1 1255.51456717515 1255.51346993586 63.541 2 0.23150926543542158 0.00039635354736424893 0.00046256882379596076 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 10061 10663 AYSSYVHQY True PC9_epitope_Rep1 1116.48762415132 1116.48652993586 45.905 2 0.23150805071975783 0.00039635354736424893 0.0004625817339248918 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 23933 21944 EYLIVFPKL True PC9_epitope_Rep1 1120.6532329244399 1120.65212993586 89.225 2 0.23150218141631612 0.00039635354736424893 0.0004626441186071702 ['ENSG00000198060|ENST00000358935|MARCHF5'] 106152 13663 STDNFTRILEY True H1975_Epitope_Rep3 1357.65139500113 1357.6502899358602 57.846 2 0.23150190687245537 0.00039635354736424893 0.00046264703693375765 ['ITGA5|p.E895Kfs*15|1|0.2|ENSG00000161638|chr12:54399908-54399908|C/-|frameshift_variant', 'ENSG00000161638|ENST00000293379|ITGA5'] 121012 12192 VEQDFHLEIA True H1975_Epitope_Rep2 1199.58225281215 1199.5811499358601 51.978 2 0.23148941115137459 0.00039635354736424893 0.00046277988260152406 ['nc|ENSG00000239732|Q9NR96-4|TLR9', 'ENSG00000247596|ENST00000305533|TWF2'] 106125 7804 STDKFKTDFY True H1975_Epitope_Rep1 1250.58191845898 1250.58028490379 34.972 3 0.231480204185904 0.00039635354736424893 0.000462877789030915 ['ENSG00000168090|ENST00000303904|COPS6'] 10116 9431 AYVEKVERL True PC9_epitope_Rep5 1105.6131590176099 1105.61206993586 41.231 2 0.231479830435588 0.00039635354736424893 0.0004628817639127143 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 39087 9427 HHTFYNELR True PC9_epitope_Rep5 1215.57850484439 1215.57685490379 41.216 3 0.23147932683951422 0.00039635354736424893 0.000462887119774694 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 134874 16032 VYVQHPITF True PC9_epitope_Rep1 1102.5811306133398 1102.58002993586 66.479 2 0.23147812836680615 0.00039635354736424893 0.0004628998660621642 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 65903 9803 LSDPQERAWY True H1975_Epitope_Rep2 1263.58840082175 1263.58730993586 42.693 2 0.23144745754360999 0.00039635354736424893 0.00046322618367305887 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 137045 9688 YALYDATYETK True NCI_RA007_Epitope_Rep5 1336.61869789052 1336.6176099358602 43.901 2 0.23142406893220113 0.00039635354736424893 0.0004634751783662662 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 1651 6219 AEFVEVTK True NCI_RA007_Epitope_Rep3 921.4807478657299 921.47964993586 31.468 2 0.23141424381234396 0.00039635354736424893 0.0004635798164423812 ['CON__P02769'] 134079 7941 VYKPAQNSW True PC9_epitope_Rep6 1091.5399940773498 1091.5388899358602 39.987 2 0.23141280037682835 0.00039635354736424893 0.000463595191107894 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 58142 4516 LEKPAKYDDIK True NCI_RA007_Epitope_Rep2 1318.7132669817 1318.7116349037901 22.198 3 0.231393959528996 0.00039635354736424893 0.0004637959201727278 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF', 'ENST00000432206.1_1_20:13373901-13374318:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000505218.1_1_5:159377718-159377781:-|nuORF', 'ENST00000424043.3_1_1:92580458-92580773:-|nuORF'] 118316 19298 TYLVDMQRF True PC9_epitope_Rep2 1171.5695799534699 1171.56848993586 79.605 2 0.23138632084160196 0.00039635354736424893 0.00046387732704871056 ['ENSG00000180340|ENST00000315323|FZD2'] 54528 19491 KYIESPVLF True PC9_epitope_Rep2 1094.60119735158 1094.60010993586 80.354 2 0.23135772025555912 0.00039635354736424893 0.0004641822560110228 ['ENSG00000100304|ENST00000216129|TTLL12'] 4613 9832 ALAAAGYDVEK True PC9_epitope_Rep1 1106.56078909158 1106.5596899358602 42.68 2 0.23133878219123308 0.00039635354736424893 0.00046438427736036013 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 23934 21645 EYLIVFPKL True PC9_epitope_Rep2 1120.6532329244399 1120.65212993586 88.732 2 0.23130705282893366 0.00039635354736424893 0.00046472294728553044 ['ENSG00000198060|ENST00000358935|MARCHF5'] 24058 11562 EYNSDLHQF True PC9_epitope_Rep2 1151.4883524273098 1151.48724993586 49.798 2 0.23129253035935562 0.00039635354736424893 0.0004648780385215131 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 72483 5958 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep2 1143.50189469691 1143.5007899358602 27.899 2 0.23128794025601412 0.00039635354736424893 0.000464927068861668 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 90571 8634 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 38.14 2 0.231282938379721 0.00039635354736424893 0.0004649805035646463 ['ENSG00000026025|ENST00000544301|VIM'] 17586 21780 EHIGIGLLSL True PC9_epitope_Rep5 1050.60734536118 1050.6062499358602 88.808 2 0.23126332654262752 0.00039635354736424893 0.00046519007492454154 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 98024 8382 SEQFTAM[Oxidation]FR True H1975_Epitope_Rep3 1131.5018946969099 1131.5007899358602 37.224 2 0.2312624635575739 0.00039635354736424893 0.0004651992989269243 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 70329 11411 LVSESSDVLPK True PC9_epitope_Rep3 1172.6288686514001 1172.6277699358602 48.894 2 0.23126147796734278 0.00039635354736424893 0.00046520983361728643 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 54988 11478 KYQEYTNEL True PC9_epitope_Rep1 1186.5506183307 1186.5495299358602 49.029 2 0.2312323356675481 0.00039635354736424893 0.00046552143545677165 ['ENSG00000183735|ENST00000331710|TBK1', 'ENST00000545392.1_1_12:64890804-64891535:+|nuORF'] 61976 10496 LLDPAQRTLY True H1975_Epitope_Rep3 1188.65027280232 1188.64916993586 45.436 2 0.23122600188818518 0.00039635354736424893 0.00046558918660835597 ['ZNF557|p.K348Tfs*8|1|0.09|ENSG00000130544|chr19:7083512-7083513|-/AACTCAC|frameshift_variant', 'nc|ENSG00000130544|Q8N988|ZNF557', 'ENSG00000130544|ENST00000252840|ZNF557', 'ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF'] 42638 3199 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 16.921 2 0.23122055459637264 0.00039635354736424893 0.0004656474630947394 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 73668 15241 MYKLSSEQF True PC9_epitope_Rep1 1131.52704643515 1131.5259499358601 63.444 2 0.2311914665642791 0.00039635354736424893 0.0004659587780081088 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 23994 6134 EYMKHTRLF True NCI_RA007_Epitope_Rep3 1223.6121134717898 1223.61100993586 31.117 2 0.2311816395154204 0.00039635354736424893 0.0004660639992623989 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 86004 10366 QHLQATGVSL True PC9_epitope_Rep4 1052.56145779792 1052.56036993586 47.572 2 0.23117694164062136 0.00039635354736424893 0.0004661143092833808 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 88674 13735 QTETGTPYMLY True H1975_Epitope_Rep2 1302.5802042068199 1302.57910993586 57.977 2 0.23117623914664184 0.00039635354736424893 0.00046612183283139516 ['ENSG00000167325|ENST00000300738|RRM1'] 38569 8203 HEVININLK True NCI_RA007_Epitope_Rep2 1078.61349337078 1078.6123899358602 36.544 2 0.23117277702614633 0.00039635354736424893 0.00046615891312075446 ['nc|ENSG00000148834|P78417-2|GSTO1', 'nc|ENSG00000148834|P78417-3|GSTO1', 'ENSG00000148834|ENST00000369713|GSTO1'] 54865 20916 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 88.612 2 0.23116626325342968 0.00039635354736424893 0.0004662286854897644 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 23923 12639 EYLENALKL True NCI_RA007_Epitope_Rep3 1091.58627556343 1091.5851699358602 56.96 2 0.2311543690477854 0.00039635354736424893 0.00046635611747522716 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6', 'GBP6|p.L464Tfs*13|1|0.05|ENSG00000183347|chr1:89383674-89383681|TCCTGGAG/-|frameshift_variant'] 137564 6809 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep3 1078.5004977145798 1078.49940993586 31.144 2 0.23115165286130282 0.00039635354736424893 0.000466385223019073 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 4240 21057 AIDPHLLLSV True PC9_epitope_Rep5 1076.6229954253201 1076.62188993586 86.055 2 0.23112073629111302 0.00039635354736424893 0.00046671664079241516 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 41261 7173 HVLVTLGEK True PC9_epitope_Rep2 994.58113061334 994.58002993586 32.983 2 0.23111990792092607 0.00039635354736424893 0.0004667255239595144 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 45486 16316 IQLVEEELDR True PC9_epitope_Rep3 1242.6455813446998 1242.64448993586 67.895 2 0.2310879923942833 0.00039635354736424893 0.00046706790467131225 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 47937 12045 IYIKQIKTF True PC9_epitope_Rep4 1152.6906810623198 1152.68958993586 54.137 2 0.23107889603108075 0.00039635354736424893 0.0004671655340077428 ['ENSG00000103479|ENST00000262133|RBL2'] 141034 20759 YSLEKVFGI True PC9_epitope_Rep2 1054.5698972233 1054.5688099358601 85.291 2 0.23106360173135534 0.00039635354736424893 0.0004673297306330763 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 126827 21410 VLPVRYFYL True PC9_epitope_Rep1 1168.6644663144798 1168.6633699358601 87.189 2 0.23106314885090204 0.00039635354736424893 0.0004673345935519527 ['KDELC2|p.P92Ffs*17|1|0.05|ENSG00000178202|chr11:108491096-108491097|-/AATGATGTAAAAATACAAAA|frameshift_variant', 'ENSG00000178202|ENST00000323468|POGLUT3'] 88863 9173 QVDNSLITKY True H1975_Epitope_Rep2 1179.6135529404298 1179.61244993586 40.237 2 0.23105770322420685 0.00039635354736424893 0.00046739307132683737 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 78587 21799 NYSGAAEYLYF True PC9_epitope_Rep2 1296.56626839484 1296.56516993586 89.323 2 0.23105054219854346 0.00039635354736424893 0.0004674699810598449 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 88661 4976 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 24.223 2 0.23104973290310057 0.00039635354736424893 0.0004674786737272336 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 8642 11725 AVAEEVNAILK True NCI_RA007_Epitope_Rep1 1155.6499384491499 1155.6488499358602 49.583 2 0.2310452425644496 0.00039635354736424893 0.00046752690753963796 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 84910 11437 QEDFFQRVP True H1975_Epitope_Rep2 1164.55637241748 1164.55526993586 49.045 2 0.23103459822653252 0.00039635354736424893 0.0004676412656323034 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 40326 12557 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5439899358599 53.607 2 0.23103135429858615 0.00039635354736424893 0.0004676761225486692 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 92860 11789 RPFEDQTSL True PC9_epitope_Rep5 1091.52473793603 1091.52364993586 50.343 2 0.23102544230683358 0.00039635354736424893 0.00046773965526352053 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 66595 10384 LSISETYDLK True H1975_Epitope_Rep1 1167.6023195503901 1167.6012299358601 44.891 2 0.2310091335038743 0.00039635354736424893 0.00046791496131405743 ['CON__P34955'] 15148 7731 EAAENSLVAYK True NCI_RA007_Epitope_Rep1 1193.5928174958497 1193.59172993586 34.065 2 0.23100522208329854 0.00039635354736424893 0.0004679570156271343 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE'] 9993 9245 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep5 1108.5011664209198 1108.5000699358602 42.211 2 0.2310046405964877 0.00039635354736424893 0.0004679632679066396 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 47785 19891 IYFEYSHAF True PC9_epitope_Rep5 1175.52876068731 1175.52766993586 81.563 2 0.23099695867758036 0.00039635354736424893 0.00046804587352689903 ['ENSG00000113318|ENST00000265081|MSH3'] 40060 9831 HPTWALKEA True PC9_epitope_Rep1 1051.5450794577898 1051.54398993586 42.676 2 0.23099286377479106 0.00039635354736424893 0.00046808991303116883 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 24458 8419 FADQEVRSL True H1975_Epitope_Rep3 1063.52982331647 1063.5287299358602 37.367 2 0.23099012482552747 0.00039635354736424893 0.0004681193719645868 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 86544 9506 QLDHVNVYY True H1975_Epitope_Rep1 1149.54547338061 1149.54436993586 41.485 2 0.23097563999990922 0.00039635354736424893 0.00046827519530719824 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 142486 20470 YYIDKLEYL True PC9_epitope_Rep3 1218.6172413385398 1218.6161499358602 83.996 2 0.23096808817355358 0.00039635354736424893 0.0004683564561909727 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 39735 11362 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7077499358602 51.477 2 0.23093572594798348 0.00039635354736424893 0.00046870484782863663 ['CON__P02769'] 130172 11269 VSEEIEDIIK True H1975_Epitope_Rep1 1173.6128842340897 1173.61178993586 48.322 2 0.23091558708246496 0.00039635354736424893 0.00046892178158033107 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 25470 12916 FEELNM[Oxidation]DLFR True H1975_Epitope_Rep3 1328.6070880414397 1328.6059899358602 54.909 2 0.23090046572518774 0.00039635354736424893 0.00046908473346613585 ['ENSG00000044574|ENST00000324460|HSPA5'] 96367 11281 RYVEIVSQF True NCI_RA007_Epitope_Rep3 1139.5975089534697 1139.59640993586 51.485 2 0.23089823243972063 0.00039635354736424893 0.0004691088047758763 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 28973 13179 FTDVNSILRY True H1975_Epitope_Rep3 1226.62953735774 1226.62844993586 55.944 2 0.23089325452163792 0.00039635354736424893 0.0004691624633740284 ['ENSG00000136628|ENST00000366923|EPRS1'] 68936 8110 LTPDETYVPK True NCI_RA007_Epitope_Rep1 1161.5917548666898 1161.59064993586 35.546 2 0.23088972093880203 0.00039635354736424893 0.0004692005567494887 ['CON__P02769'] 99362 10127 [Acetylation]-SHTILLVQPTK True H1975_Epitope_Rep1 1277.7343370957499 1277.7332299358602 43.89 2 0.2308880976043864 0.00039635354736424893 0.00046921805795598846 ['ENSG00000100632|ENST00000557016|ERH'] 1333 7456 AEDVLSGKVSA True H1975_Epitope_Rep2 1074.55570371114 1074.55460993586 33.627 2 0.23086739026289332 0.00039635354736424893 0.0004694413617581867 ['ENSG00000175390|ENST00000651655|EIF3F'] 31319 10715 GDLGIEIPAEK True H1975_Epitope_Rep3 1140.60265390356 1140.60154993586 46.291 2 0.2308599417838624 0.00039635354736424893 0.00046952171072573513 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 104722 21351 SQVEEELFSV True PC9_epitope_Rep3 1165.55028397753 1165.54918993586 87.424 2 0.23084880398195945 0.00039635354736424893 0.0004696418832611011 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 43352 5794 IGAEVYHNLK True H1975_Epitope_Rep3 1142.60840799034 1142.6067749037902 27.31 3 0.23083295505066118 0.00039635354736424893 0.0004698129402408799 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 7159 5825 AQYEDIANR True PC9_epitope_Rep6 1078.5043368446197 1078.5032299358602 30.621 2 0.23083207185265445 0.00039635354736424893 0.00046982247440551097 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 47310 14653 IVEDGDIIFFK True H1975_Epitope_Rep1 1294.6809042242596 1294.67980993586 61.576 2 0.23081529882795024 0.00039635354736424893 0.0004700035768588783 ['ENSG00000138430|ENST00000284719|OLA1', 'ENST00000497760.1_1_2:174940156-174943911:-|nuORF', 'ENST00000396387.2_1_22:42503789-42504386:-|nuORF', 'ENST00000392560.6_1_2:174940156-174989039:-|nuORF', 'nc|ENSG00000138430|Q9NTK5-2|OLA1'] 61990 20444 LLDPNVKSIFV True PC9_epitope_Rep2 1243.71762408615 1243.71652993586 84.066 2 0.2308112418403146 0.00039635354736424893 0.00047004739166484007 ['ENSG00000117419|ENST00000372257|ERI3', 'nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3'] 23431 8788 EVTEFEDIK True H1975_Epitope_Rep3 1108.5288202569598 1108.5277299358602 38.808 2 0.23079807794561016 0.00039635354736424893 0.0004701895878052765 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 140025 8178 YQEFTDHLVK True NCI_RA007_Epitope_Rep1 1278.6244519772997 1278.6228149037902 35.808 3 0.23078849767632148 0.00039635354736424893 0.00047029310082314073 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF'] 6836 18840 AQFEHTILL True PC9_epitope_Rep5 1070.5760452329 1070.57494993586 77.485 2 0.2307879076751494 0.00039635354736424893 0.0004702994764227357 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 137785 8877 YEQELKDLAA True H1975_Epitope_Rep3 1178.5819184589798 1178.58082993586 39.146 2 0.23078656473541975 0.00039635354736424893 0.00047031398865957807 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 53370 14404 KQTALVELLK True PC9_epitope_Rep5 1141.7070594024499 1141.7054249037901 60.404 3 0.23078032659732162 0.00039635354736424893 0.0004703814058683104 ['CON__P02769'] 87685 19579 QQVQRLPFL True PC9_epitope_Rep5 1127.64512785223 1127.64402993586 80.362 2 0.23073330802470912 0.00039635354736424893 0.00047088986004684483 ['ENSG00000132963|ENST00000380842|POMP'] 23690 19823 EYDNFFQHL True PC9_epitope_Rep4 1211.5247379360299 1211.52364993586 84.377 2 0.23073107086016795 0.00039635354736424893 0.00047091406625904216 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF'] 41075 8250 HTMEFALVK True NCI_RA007_Epitope_Rep5 1074.55320161334 1074.55210993586 38.412 2 0.23072654236687717 0.00039635354736424893 0.00047096306856338964 ['ENSG00000182636|ENST00000649030|NDN'] 71042 18271 LYIVHPTMF True PC9_epitope_Rep6 1119.57868808519 1119.57758993586 82.919 2 0.23072444890277186 0.00039635354736424893 0.0004709857234263625 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 115693 14243 [Acetylation]-TSALENYINR True H1975_Epitope_Rep3 1221.59896582175 1221.5978699358602 60.127 2 0.23071301457645832 0.00039635354736424893 0.0004711094816929215 ['ENSG00000128534|ENST00000249299|LSM8'] 3504 10114 [Acetylation]-AGLNSLEAVKR True NCI_RA007_Epitope_Rep2 1198.66698581192 1198.6658899358602 43.929 2 0.23070908710659352 0.00039635354736424893 0.0004711519977899873 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 47972 12525 IYKAPSENW True PC9_epitope_Rep5 1106.53965972418 1106.53856993586 53.176 2 0.230702912301239 0.00039635354736424893 0.00047121884978436964 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 111972 4040 TIQSGEQPYK True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56550993586 21.798 2 0.2307023152086496 0.00039635354736424893 0.0004712253147567469 ['ENSG00000168653|ENST00000372969|NDUFS5'] 72489 6780 MLDHQPPQY True H1975_Epitope_Rep3 1127.50697969691 1127.50588993586 31.033 2 0.23068772436112375 0.00039635354736424893 0.0004713833236522762 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 28949 9456 FTDQQKLIY True H1975_Epitope_Rep2 1154.5971746002997 1154.5960699358602 41.34 2 0.23067571399037096 0.00039635354736424893 0.0004715134276331221 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 28910 13118 FTDHELQEWY True H1975_Epitope_Rep2 1366.58298108814 1366.58188993586 55.579 2 0.23066903718911203 0.00039635354736424893 0.00047158577057385104 ['ENSG00000115756|ENST00000307845|HPCAL1'] 112089 7276 TIVEEVQDGK True NCI_RA007_Epitope_Rep1 1116.5662683948397 1116.56516993586 32.292 2 0.23063857887728134 0.00039635354736424893 0.0004719159267518654 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2'] 95970 13938 RYLEQLHQL True PC9_epitope_Rep1 1198.64585612822 1198.64422490379 58.448 3 0.23061760063485648 0.00039635354736424893 0.00047214345753606124 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 41445 20152 HYINMPVQF True PC9_epitope_Rep1 1147.5484505860697 1147.5473499358602 82.345 2 0.23061557225127277 0.00039635354736424893 0.0004721654632928073 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF', 'ENST00000513183.1_1_18:13124610-13124766:+|nuORF', 'ENST00000510237.5_1_18:13103579-13124766:+|nuORF'] 116840 6139 TVEPQLEAR True NCI_RA007_Epitope_Rep2 1041.5454733806098 1041.54436993586 28.487 2 0.23061485164635673 0.00039635354736424893 0.00047217328132045027 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 67916 7300 LTDADAMKY True H1975_Epitope_Rep2 1026.46919720586 1026.46808993586 33.017 2 0.23060365849231157 0.00039635354736424893 0.00047229473539756083 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 70465 12309 LVTYVPVTTFK True NCI_RA007_Epitope_Rep4 1266.72237511342 1266.7212699358602 54.341 2 0.23059632422611173 0.00039635354736424893 0.0004723743346567844 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 106615 5079 STQSLSLQR True NCI_RA007_Epitope_Rep3 1018.54072235334 1018.53962993586 26.97 2 0.2305889936636763 0.00039635354736424893 0.00047245390716731003 ['nc|nan|Q7Z7L8|C11orf96', 'ENSG00000187479|ENST00000617612|C11orf96'] 88869 13005 QVDPLSALKY True H1975_Epitope_Rep3 1132.6128246644398 1132.61172993586 55.258 2 0.23057279089087515 0.00039635354736424893 0.0004726298343329072 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 36230 12964 GVDDAANFRTV True PC9_epitope_Rep3 1163.5571006934701 1163.5560099358602 54.891 2 0.2305575062750517 0.00039635354736424893 0.000472795852533929 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 106181 8697 STDPREALQY True H1975_Epitope_Rep3 1178.5567663402999 1178.5556699358601 38.452 2 0.23055051316223857 0.00039635354736424893 0.00047287182972305153 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 83319 15078 PTDYADIMM[Oxidation]GY True H1975_Epitope_Rep2 1291.51007642211 1291.50896993586 63.149 2 0.23054442021842758 0.00039635354736424893 0.00047293803694487327 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 61889 13548 LLDDAQRLLY True H1975_Epitope_Rep3 1218.66083748602 1218.6597499358602 57.394 2 0.23053669151467449 0.00039635354736424893 0.0004730220320616291 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'ZNF671|p.G225Afs*5|1|0.13|ENSG00000083814|chr19:57721412-57721412|C/-|frameshift_variant', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 114020 8945 TPAQYDASELK True PC9_epitope_Rep1 1221.58773211541 1221.5866299358602 39.249 2 0.2305301529443755 0.00039635354736424893 0.0004730931045614325 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 49531 11534 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 49.375 2 0.23052142072715 0.00039635354736424893 0.00047318803812082473 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 138521 9054 YHTDTTVKF True PC9_epitope_Rep5 1110.53457434374 1110.53346993586 39.77 2 0.23050471194016459 0.00039635354736424893 0.0004733697433835302 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant'] 128839 17734 VQDEFLEKL True PC9_epitope_Rep4 1119.5811901829898 1119.58008993586 76.236 2 0.23049048435907318 0.00039635354736424893 0.0004735245211261215 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 110117 5634 TEMNGRIVAT True H1975_Epitope_Rep2 1090.5440934816197 1090.54298993586 26.671 2 0.23047515113342662 0.00039635354736424893 0.0004736913836992554 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 23575 11216 EVYELLDSPGK True NCI_RA007_Epitope_Rep1 1248.6237832709596 1248.62268993586 47.627 2 0.23046847949768307 0.00039635354736424893 0.00047376400564536314 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 140196 13071 YQTQLIQRV True PC9_epitope_Rep5 1147.6349570913499 1147.63386993586 55.285 2 0.23046799022002296 0.00039635354736424893 0.0004737693319596299 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 69609 10966 LVDNSIRELQY True H1975_Epitope_Rep2 1348.69867954672 1348.6975899358602 47.21 2 0.23045959579226402 0.00039635354736424893 0.00047386072370385774 ['ENSG00000105483|ENST00000651546|CARD8', 'nc|ENSG00000105483|Q9Y2G2-6|CARD8', 'ENST00000518596.5_1_19:48737658-48744277:-|nuORF', 'ENST00000522051.5_1_19:48737658-48744277:-|nuORF', 'ENST00000517778.5_1_19:48737137-48744277:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-3|CARD8'] 118208 21996 TYKNFFYLI True PC9_epitope_Rep5 1207.62774645259 1207.62664993586 89.634 2 0.23045777903344855 0.00039635354736424893 0.00047388050543336745 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 75342 6454 NIQGITKPAIR True NCI_RA007_Epitope_Rep1 1209.7193554216499 1209.71770490379 29.127 3 0.23044443289765906 0.00039635354736424893 0.00047402584987372927 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 12324 9199 DIQIEQLNR True H1975_Epitope_Rep1 1127.5934862021902 1127.5923899358602 40.291 2 0.23043516291049182 0.00039635354736424893 0.00047412682984093735 ['ENST00000514611.1_1_5:139625581-139680122:-|nuORF', 'ENST00000507185.1_1_5:139661015-139682658:-|nuORF', 'ENSG00000113068|ENST00000261813|PFDN1'] 70807 14457 LYAPYSTHF True PC9_epitope_Rep6 1097.51819600361 1097.5170899358602 67.497 2 0.2304279040343904 0.00039635354736424893 0.0004742059174076153 ['ENSG00000013588|ENST00000014914|GPRC5A'] 73186 11893 MRYNEKELQAL True PC9_epitope_Rep2 1393.70238502817 1393.70074490379 51.071 3 0.23042270124262776 0.00039635354736424893 0.0004742626114798311 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 110226 4770 TEQQQRFHEI True H1975_Epitope_Rep2 1314.6316626160599 1314.63001490379 23.437 3 0.2304147660810672 0.00039635354736424893 0.0004743490928868086 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 29761 12113 FVNVVPTFGK True H1975_Epitope_Rep1 1106.6124307416198 1106.61132993586 51.606 2 0.23041039682798017 0.00039635354736424893 0.0004743967179720824 ['ENSG00000149806|ENST00000529639|FAU'] 29474 7999 FVETESVRY True H1975_Epitope_Rep3 1128.54513902744 1128.5440499358601 35.738 2 0.23040249008720698 0.00039635354736424893 0.0004744829140519755 ['ENSG00000095139|ENST00000264028|ARCN1'] 117279 9707 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep2 1134.59546072858 1134.5943699358602 42.676 2 0.23040129769246226 0.00039635354736424893 0.00047449591441903454 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 78266 20954 NYIEFTRIL True PC9_epitope_Rep3 1167.62880908175 1167.6277099358601 85.877 2 0.23040081644408372 0.00039635354736424893 0.0004745011614450595 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 48231 14021 IYQGRLWAF True NCI_RA007_Epitope_Rep3 1152.60801406752 1152.6069099358601 62.458 2 0.23037093869918576 0.00039635354736424893 0.00047482703095677126 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 28856 9538 FTDAGFEHY True H1975_Epitope_Rep2 1085.4454249861699 1085.4443299358602 41.66 2 0.2303580051146737 0.00039635354736424893 0.0004749681641323179 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 138819 20156 YIYDKDMEII True PC9_epitope_Rep1 1301.6213407428097 1301.62024993586 82.359 2 0.2303565855938952 0.00039635354736424893 0.0004749836567144733 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 33404 15518 GLADNTVIAKV True PC9_epitope_Rep5 1099.62372370131 1099.62262993586 64.7 2 0.230345667847696 0.00039635354736424893 0.00047510282942185876 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 86575 16492 QLEDELVSLQK True PC9_epitope_Rep4 1300.6874461566802 1300.68634993586 71.406 2 0.2303438764675685 0.00039635354736424893 0.0004751223861041608 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 110225 4749 TEQQQRFHEI True H1975_Epitope_Rep2 1314.6316626160599 1314.6305699358602 23.357 2 0.2303394188547855 0.00039635354736424893 0.0004751710538296266 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 130009 8357 VSAEEALKY True H1975_Epitope_Rep2 1008.5127762699999 1008.51166993586 37.097 2 0.23033121867584158 0.00039635354736424893 0.00047526059554307 ['ENSG00000070061|ENST00000374647|ELP1'] 8335 5026 ATITKVLQK True NCI_RA007_Epitope_Rep4 1000.6280808057599 1000.62698993586 25.82 2 0.23032934739933053 0.00039635354736424893 0.00047528103128696567 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 116346 8049 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 35.909 2 0.23031543675763805 0.00039635354736424893 0.0004754329735711732 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 91917 7575 RKLLQQIRL True NCI_RA007_Epitope_Rep1 1166.7611606639798 1166.75950490379 33.458 3 0.23031443410746782 0.00039635354736424893 0.0004754439271381583 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 40875 8034 HSEYHTLLY True H1975_Epitope_Rep2 1161.54547338061 1161.54436993586 35.853 2 0.23031393144332213 0.00039635354736424893 0.00047544941864565126 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant'] 68384 8144 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 36.276 2 0.23030041609727483 0.00039635354736424893 0.0004755970950173833 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 41975 7140 IDEPLEGSEDR True NCI_RA007_Epitope_Rep1 1258.56772494682 1258.5666299358602 31.763 2 0.23028970052250453 0.00039635354736424893 0.0004757142121975774 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 120652 7608 VEILANDQGNR True PC9_epitope_Rep1 1227.6207635791898 1227.6196699358602 34.084 2 0.23027467598264018 0.00039635354736424893 0.00047587847346364015 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 142858 15051 YYTDIM[Oxidation]HTL True PC9_epitope_Rep5 1171.5219614351497 1171.5208699358602 62.9 2 0.2302512828755213 0.00039635354736424893 0.0004761343404222084 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 135159 12090 WELVTREVP True H1975_Epitope_Rep2 1127.59750895347 1127.59640993586 51.587 2 0.23024025497801412 0.00039635354736424893 0.00047625500820063605 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 134851 9034 VYVERAEVL True NCI_RA007_Epitope_Rep4 1076.5866099165999 1076.58550993586 41.582 2 0.23023749627069834 0.00039635354736424893 0.0004762851989041927 ['ENSG00000089234|ENST00000419234|BRAP'] 452 10653 AALQELLSK True NCI_RA007_Epitope_Rep5 971.5651461960299 971.56404993586 47.613 2 0.23023523829772152 0.00039635354736424893 0.00047630991110700344 ['ENSG00000118181|ENST00000527673|RPS25'] 103154 10454 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 47.921 2 0.23022467434885185 0.00039635354736424893 0.000476425544480102 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 1434 14502 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48546993586 61.143 2 0.2302228127452081 0.00039635354736424893 0.00047644592458066196 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 2378 11601 AEQDLIREL True H1975_Epitope_Rep2 1085.57168812845 1085.5705899358602 49.69 2 0.23021417633629118 0.00039635354736424893 0.00047654048401174574 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 90576 8513 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 37.7 2 0.23019974656796618 0.00039635354736424893 0.00047669851653597324 ['ENSG00000026025|ENST00000544301|VIM'] 135582 20527 WLAEKLPTL True PC9_epitope_Rep1 1069.61718176889 1069.6160899358601 83.769 2 0.230190452185446 0.00039635354736424893 0.0004768003349710018 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 44533 11855 ILMEHIHKL True PC9_epitope_Rep5 1132.64268532408 1132.64104490379 50.598 3 0.23017866964021447 0.00039635354736424893 0.00047692944218147716 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 72672 4700 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 23.204 2 0.23017566746935458 0.00039635354736424893 0.0004769623440676197 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 118639 18357 TYSPALNKMF True PC9_epitope_Rep5 1170.5743309807401 1170.5732299358601 75.627 2 0.23016079010688492 0.00039635354736424893 0.0004771254241181369 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 77079 8570 NRLENDGATAL True PC9_epitope_Rep2 1172.5785644140399 1172.57746993586 38.326 2 0.23015742274461579 0.00039635354736424893 0.0004771623436394696 ['ENSG00000100401|ENST00000356244|RANGAP1'] 73304 7108 MTDTYRLKY True H1975_Epitope_Rep2 1189.5801446371697 1189.5784949037902 32.271 3 0.23015665842638644 0.00039635354736424893 0.0004771707239694661 ['ENSG00000145390|ENST00000692078|USP53'] 90555 8132 REM[Oxidation]EENFAV True H1975_Epitope_Rep2 1139.49172393603 1139.4906299358602 36.229 2 0.23015282558212377 0.00039635354736424893 0.0004772127512305897 ['ENSG00000026025|ENST00000544301|VIM'] 24595 22481 FAIDPHLLLSV True PC9_epitope_Rep2 1223.69140933831 1223.6903099358601 91.963 2 0.23014721398252905 0.00039635354736424893 0.0004772742893000185 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 30103 14547 FYLEGGFSKF True NCI_RA007_Epitope_Rep4 1193.57571087973 1193.57460993586 63.332 2 0.2301352676675148 0.00039635354736424893 0.0004774053218061016 ['ENSG00000139318|ENST00000279488|DUSP6'] 67950 11147 LTDDGNKWLY True H1975_Epitope_Rep3 1223.58225281215 1223.5811499358601 47.972 2 0.23013436219736041 0.00039635354736424893 0.00047741525487749045 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 98362 10924 SEYLRYEDTL True H1975_Epitope_Rep2 1287.59829679911 1287.5971899358601 47.051 2 0.23012369486027529 0.00039635354736424893 0.00047753229192789746 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 140876 9677 YSEDHIIGAY True H1975_Epitope_Rep1 1166.5244035828598 1166.5233099358602 42.147 2 0.2301226584083783 0.00039635354736424893 0.00047754366492911863 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 56881 13991 LDPSIFESLQK True H1975_Epitope_Rep3 1275.6710678165498 1275.66996993586 59.135 2 0.23012194159128024 0.00039635354736424893 0.0004775515307321574 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 31317 10562 GDLGIEIPAEK True H1975_Epitope_Rep1 1140.60265390356 1140.60154993586 45.578 2 0.23011385782195173 0.00039635354736424893 0.00047764024483779385 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 13899 10339 DQVANSAFVER True PC9_epitope_Rep5 1234.59421447818 1234.5931099358602 44.753 2 0.23010752651192162 0.00039635354736424893 0.00047770973838906906 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 14743 9293 DVNAAIATIK True NCI_RA007_Epitope_Rep5 1014.57095985246 1014.56986993586 42.391 2 0.23010667470315008 0.00039635354736424893 0.00047771908876323736 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 71034 19084 LYIVEPLKF True PC9_epitope_Rep6 1120.6532329244399 1120.65212993586 86.051 2 0.23010247130051095 0.00039635354736424893 0.0004777652325445409 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 22440 6593 ETERLTDDY True H1975_Epitope_Rep3 1140.4934973773998 1140.49240993586 30.313 2 0.2300769442377116 0.00039635354736424893 0.0004780455575673481 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF'] 98257 10366 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 44.927 2 0.23005934179323684 0.00039635354736424893 0.0004782389546409051 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 22458 15348 ETEVYEGALLY True H1975_Epitope_Rep2 1285.6077988536497 1285.6067099358602 64.194 2 0.2300476267746559 0.00039635354736424893 0.00047836771039705677 ['nc|ENSG00000099910|Q53GT1-3|KLHL22', 'ENSG00000099910|ENST00000328879|KLHL22'] 41648 7253 IAEVDASVVR True H1975_Epitope_Rep1 1057.5767735088898 1057.57566993586 32.908 2 0.23002918022305435 0.00039635354736424893 0.00047857052062314057 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1', 'ENST00000480561.5_1_3:48636882-48638270:-|nuORF', 'ENST00000471189.5_1_3:48636563-48638429:-|nuORF'] 99493 6238 SIDDQSQQSY True H1975_Epitope_Rep2 1169.4836609696902 1169.48256993586 28.953 2 0.2300270779080543 0.00039635354736424893 0.00047859363995657165 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 41983 9240 IDEPLEGSEDR True PC9_epitope_Rep5 1258.56772494682 1258.5666299358602 40.489 2 0.23002400930556036 0.00039635354736424893 0.00047862738764555804 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 26836 11202 FLDASGAKLDY True H1975_Epitope_Rep1 1198.5870038394198 1198.5859099358602 48.057 2 0.2300227441150653 0.00039635354736424893 0.0004786413025753433 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 111100 4815 THEAQIQEMR True PC9_epitope_Rep1 1241.58226989549 1241.5806149037899 23.391 3 0.23001895487053717 0.00039635354736424893 0.0004786829802070603 ['ENSG00000100345|ENST00000216181|MYH9'] 140077 21012 YQLDPKFITSI True PC9_epitope_Rep5 1323.7074533252699 1323.70634993586 85.88 2 0.2299837725422198 0.00039635354736424893 0.00047907012201676063 ['ENSG00000119888|ENST00000263735|EPCAM'] 114979 18893 TQYPFDFRGA True PC9_epitope_Rep5 1200.5563724174797 1200.55526993586 77.691 2 0.2299822089234063 0.00039635354736424893 0.00047908733516542493 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 128393 17758 VPRPAVLDPAL True PC9_epitope_Rep5 1146.67609362734 1146.6749899358601 73.325 2 0.22994764392723338 0.00039635354736424893 0.0004794680035530512 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 29286 7132 FVAVTGAEEDR True NCI_RA007_Epitope_Rep2 1192.5724164044398 1192.5713099358602 32.364 2 0.22994414534842847 0.00039635354736424893 0.0004795065507223179 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-4|NSFL1C', 'ENST00000478168.1_1_20:1444972-1447445:-|nuORF', 'ENST00000487086.1_1_20:1438843-1447469:-|nuORF', 'NSFL1C|p.G98Afs*35|1|0.39|ENSG00000088833|chr20:1455118-1455118|C/-|frameshift_variant'] 121331 7452 VEVEGDNRYIA True H1975_Epitope_Rep1 1263.6095301891498 1263.6084299358602 33.665 2 0.22994016975874856 0.00039635354736424893 0.0004795503573477797 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 134171 12084 VYLPNINKI True NCI_RA007_Epitope_Rep5 1072.62808080576 1072.6269899358601 53.139 2 0.2299386166795448 0.00039635354736424893 0.0004795674716629417 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 61108 19230 LIIDENGVHEL True PC9_epitope_Rep5 1250.65066672514 1250.6495699358602 79.008 2 0.2299304591546794 0.00039635354736424893 0.00047965737440500844 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 130158 7994 VSDYLRQSY True H1975_Epitope_Rep2 1129.54038800017 1129.53928993586 35.698 2 0.22992981654939482 0.00039635354736424893 0.0004796644571707254 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.Q827Lfs*8|1|0.09|ENSG00000189079|chr12:45850603-45850619|AACCTGTGCAAACTTCA/-|frameshift_variant', 'ARID2|p.L161Cfs*11|1|0.36|ENSG00000189079|chr12:45817733-45817734|TG/-|frameshift_variant', 'ARID2|p.S218Pfs*74|1|0.08|ENSG00000189079|chr12:45821431-45821431|T/-|frameshift_variant'] 30133 20991 FYNLLTRTF True PC9_epitope_Rep5 1173.61824439805 1173.6171499358602 85.804 2 0.2299254141620086 0.00039635354736424893 0.0004797129829025927 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 44478 20632 ILLDLTDNRL True PC9_epitope_Rep5 1184.6764875501601 1184.67538993586 84.413 2 0.22991728171836923 0.00039635354736424893 0.00047980263648532065 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant'] 2087 12491 AELENLVNQAA True H1975_Epitope_Rep3 1170.58806646858 1170.58696993586 53.242 2 0.2299108080452161 0.00039635354736424893 0.0004798740154875143 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 88865 13020 QVDPLSALKY True H1975_Epitope_Rep1 1132.6128246644398 1132.61172993586 55.164 2 0.22990095737083094 0.00039635354736424893 0.00047998264989161367 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 95758 14636 RYIANTVEL True PC9_epitope_Rep1 1077.58185888933 1077.5807699358602 61.121 2 0.2298966501863431 0.00039635354736424893 0.00048003015778456064 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 29038 9017 FTEQYNEQY True H1975_Epitope_Rep2 1220.4985827578398 1220.49807496793 39.635 1 0.22986497547809898 0.00039635354736424893 0.00048037967216606534 ['ENSG00000173914|ENST00000310046|RBM4B'] 74905 15598 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69646993586 65.275 2 0.22985042264902025 0.00039635354736424893 0.0004805403408587709 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 107667 5066 SVQSDQGYISR True NCI_RA007_Epitope_Rep3 1238.58912909774 1238.58802993586 26.919 2 0.22984511000341007 0.00039635354736424893 0.0004805990078912967 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 42821 4698 IEQAYDNPHEA True H1975_Epitope_Rep2 1285.55749461629 1285.5563899358601 23.164 2 0.22984188585698026 0.00039635354736424893 0.00048063461533261924 ['ENSG00000174231|ENST00000304992|PRPF8'] 14975 22641 DYFFKPVLF True PC9_epitope_Rep2 1174.60628273202 1174.6051899358602 92.583 2 0.22981770432592732 0.00039635354736424893 0.0004809017603025002 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 75797 10975 NLNLEPFSEK True H1975_Epitope_Rep1 1189.5979028762897 1189.5968099358602 47.18 2 0.22981289741789745 0.00039635354736424893 0.0004809548822671788 ['ENSG00000198959|ENST00000361475|TGM2'] 9318 4817 AVQRTLLEK True NCI_RA007_Epitope_Rep2 1056.6291434349198 1056.6280499358602 23.362 2 0.22980934016298032 0.00039635354736424893 0.0004809941978913388 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 100258 8605 SIYGEKFEDEN True NCI_RA007_Epitope_Rep1 1329.57247597409 1329.57136993586 37.472 2 0.22980795446508043 0.00039635354736424893 0.00048100951382544716 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 115080 16460 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61225490379 68.451 3 0.22980246889925468 0.00039635354736424893 0.00048107014985541855 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 98372 11488 SEYMRNGDFLP True H1975_Epitope_Rep1 1327.5866865695898 1327.58558993586 49.171 2 0.22979682097587859 0.00039635354736424893 0.000481132588556249 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'ENST00000462970.5_1_1:151227258-151237442:+|nuORF', 'ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 9191 9015 AVLSWKLAK True NCI_RA007_Epitope_Rep4 1014.6226015024998 1014.62150993586 41.509 2 0.22979288648005453 0.00039635354736424893 0.0004811760898446374 ['ENSG00000188725|ENST00000339020|SMIM15'] 57842 8914 LEEVTGKLQVA True H1975_Epitope_Rep3 1185.66050313285 1185.6594099358601 39.287 2 0.22978401624737999 0.00039635354736424893 0.00048127417700090044 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 65234 17483 LQSDRVLYL True PC9_epitope_Rep5 1105.6131590176099 1105.61206993586 72.25 2 0.22977483829137724 0.00039635354736424893 0.00048137568808174895 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4'] 67862 20487 LTAPEDVFSKL True PC9_epitope_Rep3 1218.6496040959798 1218.6485099358601 84.061 2 0.22977236743909074 0.00039635354736424893 0.00048140302015503003 ['ENSG00000155561|ENST00000285968|NUP205'] 46036 14171 ISGLIYEETR True PC9_epitope_Rep3 1179.6135529404298 1179.61244993586 59.594 2 0.22975254727016126 0.00039635354736424893 0.00048162232323813766 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 38253 5729 HEDVRLYTA True H1975_Epitope_Rep3 1102.54072235334 1102.5396299358601 27.065 2 0.22974035794761355 0.00039635354736424893 0.00048175724350503864 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENST00000590533.1_1_19:2807573-2808419:+|nuORF', 'ENST00000591149.5_1_19:2807001-2808381:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 9323 4504 AVQRTLLEK True NCI_RA007_Epitope_Rep4 1056.6291434349198 1056.6280499358602 23.715 2 0.22973786945814212 0.00039635354736424893 0.00048178479257269743 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 95980 10856 RYLEQLHQL True PC9_epitope_Rep6 1198.64585612822 1198.64474993586 52.617 2 0.2297225452101494 0.00039635354736424893 0.00048195447600575444 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 95427 21656 RWFQPAIPSW True PC9_epitope_Rep1 1286.6560268890996 1286.65492993586 88.129 2 0.2297149811836158 0.00039635354736424893 0.0004820382536012268 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 67992 11228 LTDFIREEY True H1975_Epitope_Rep1 1184.57135377528 1184.5702499358601 48.162 2 0.22966912958163782 0.00039635354736424893 0.00048254640927676004 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 40319 13229 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 55.751 2 0.22966321937542175 0.00039635354736424893 0.0004826119489092769 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 118317 19691 TYLVDMQRF True PC9_epitope_Rep3 1171.5695799534699 1171.56848993586 80.971 2 0.2296582926489001 0.00039635354736424893 0.0004826665893348411 ['ENSG00000180340|ENST00000315323|FZD2'] 22926 11322 EVEELILTESK True NCI_RA007_Epitope_Rep2 1288.67621276664 1288.67510993586 48.629 2 0.22964084181076436 0.00039635354736424893 0.0004828601797866401 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 132770 17491 VVITEKGISDL True PC9_epitope_Rep5 1172.66525416012 1172.66414993586 72.282 2 0.22962357837813044 0.00039635354736424893 0.0004830517679078402 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 72478 5532 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 26.343 2 0.2296214555020599 0.00039635354736424893 0.0004830753326727661 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 140189 22021 YQTPRLWLF True PC9_epitope_Rep3 1222.6498788795 1222.6487899358601 90.003 2 0.22962092565956424 0.00039635354736424893 0.0004830812143140992 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 142628 20772 YYNPHLLLNTL True PC9_epitope_Rep1 1359.7186867153098 1359.7175899358601 84.727 2 0.2296105473833363 0.00039635354736424893 0.0004831964352989597 ['ENSG00000205339|ENST00000379719|IPO7'] 24186 21165 EYQKVWNLF True PC9_epitope_Rep5 1225.6131590176099 1225.61206993586 86.462 2 0.22960030666477776 0.00039635354736424893 0.0004833101561256153 ['ENSG00000059378|ENST00000263549|PARP12'] 72685 3720 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 19.371 2 0.22959410867322882 0.00039635354736424893 0.00048337899644070915 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 109166 18678 TAM[Oxidation]DVVYAL True PC9_epitope_Rep4 997.4790339940099 997.47792993586 79.925 2 0.22959054056068984 0.00039635354736424893 0.00048341863148090115 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 33399 15604 GLADNTVIAKV True PC9_epitope_Rep1 1099.62372370131 1099.62262993586 64.84 2 0.22958111337608356 0.00039635354736424893 0.00048352336551383743 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 108361 18246 SYLEKQVVTF True PC9_epitope_Rep3 1212.6390394122798 1212.6379499358602 75.394 2 0.229580626590938 0.00039635354736424893 0.0004835287742121957 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 24330 17183 EYVNDFDLLKF True NCI_RA007_Epitope_Rep3 1401.6816325002499 1401.68052993586 75.483 2 0.22957621140749568 0.00039635354736424893 0.00048357783434694083 ['ENSG00000204103|ENST00000373313|MAFB'] 74881 7271 NHHLQETSF True PC9_epitope_Rep3 1111.50467119779 1111.50356993586 32.977 2 0.22957420478762924 0.00039635354736424893 0.00048360013292859775 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 108926 10866 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53856993586 46.878 2 0.22957419255639364 0.00039635354736424893 0.00048360026885147807 ['ENSG00000183751|ENST00000568546|TBL3'] 140925 9711 YSELASHVVSY True H1975_Epitope_Rep2 1253.59281749585 1253.59172993586 42.338 2 0.2295678562307684 0.00039635354736424893 0.00048367068811975644 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 124663 19347 VGYDKDFLTI True PC9_epitope_Rep4 1169.5968402471299 1169.59574993586 82.528 2 0.22956184289652132 0.00039635354736424893 0.0004837375273112911 ['ENSG00000123066|ENST00000281928|MED13L'] 26416 7685 FIAIKPDGVQR True NCI_RA007_Epitope_Rep1 1242.7084563847798 1242.70681490379 33.886 3 0.22955493729239418 0.00039635354736424893 0.0004838142956593407 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 71920 7092 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep2 1282.5975859869 1282.59648993586 32.211 2 0.22949351992697725 0.00039635354736424893 0.00048449759935058773 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 90260 6318 REEEYYTEP True H1975_Epitope_Rep3 1214.5091474415399 1214.50804993586 29.296 2 0.22949348147211848 0.00039635354736424893 0.00048449802748626807 ['ENSG00000113621|ENST00000358387|TXNDC15', 'nc|ENSG00000113621|Q96J42-2|TXNDC15'] 134314 16266 VYNSEYYHF True PC9_epitope_Rep3 1220.5138388991602 1220.51274993586 67.704 2 0.2294841178453609 0.00039635354736424893 0.0004846022883610886 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 108532 14826 SYMPTVSHL True PC9_epitope_Rep2 1033.49026700361 1033.4891699358602 62.291 2 0.2294645340031114 0.00039635354736424893 0.0004848204207171061 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 106453 19995 STIRLLTSL True PC9_epitope_Rep3 1002.60734536118 1002.60624993586 82.156 2 0.22945865417896444 0.00039635354736424893 0.0004848859316820391 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 110666 10162 TGAAPIIDVVR True H1975_Epitope_Rep1 1110.6397081186199 1110.6386099358601 44.027 2 0.22945803889971678 0.00039635354736424893 0.000484892787423655 ['ENSG00000166441|ENST00000314138|RPL27A'] 8645 10901 AVAEEVNAILK True NCI_RA007_Epitope_Rep3 1155.6499384491499 1155.6488499358602 49.954 2 0.2294450368839469 0.00039635354736424893 0.0004850376849708843 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 134871 10632 VYVQHPITF True NCI_RA007_Epitope_Rep4 1102.5811306133398 1102.58002993586 47.743 2 0.22942171896748015 0.00039635354736424893 0.00048529765418055504 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 142916 14497 YYVWLQHTL True NCI_RA007_Epitope_Rep4 1221.61824439805 1221.6171499358602 63.121 2 0.22939317267436965 0.00039635354736424893 0.00048561610438721065 ['nc|ENSG00000003402|O15519-4|CFLAR', 'nc|ENSG00000003402|O15519-15|CFLAR', 'nc|ENSG00000003402|O15519-8|CFLAR', 'ENSG00000003402|ENST00000309955|CFLAR'] 9990 8883 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep3 1108.5011664209198 1108.5000699358602 42.03 2 0.22937760175519337 0.00039635354736424893 0.0004857898952410827 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 142175 8034 YVTIIDAPGHR True NCI_RA007_Epitope_Rep2 1240.6564208119198 1240.65478490379 35.883 3 0.22936730768412586 0.00039635354736424893 0.0004859048241574675 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 134125 19487 VYLDHAGATLF True PC9_epitope_Rep2 1205.6080736371698 1205.6069699358602 80.339 2 0.22936110459051406 0.00039635354736424893 0.0004859740922250514 ['ENSG00000075643|ENST00000261326|MOCOS'] 86548 11183 QLDLAQRTLY True H1975_Epitope_Rep2 1219.6560864587502 1219.6549899358602 48.054 2 0.22936095037468218 0.00039635354736424893 0.00048597581443273716 ['ENSG00000198131|ENST00000687789|ZNF544', 'ENST00000595560.1_1_19:58067392-58071050:-|nuORF', 'nc|ENSG00000251369|Q7Z398-2|ZNF550', 'ENSG00000251369|ENST00000699333|ZNF550', 'ENSG00000204524|ENST00000414468|ZNF805', 'ENSG00000083844|ENST00000263095|ZNF264', 'ENST00000596597.5_1_19:58757693-58758161:+|nuORF'] 92151 14033 RLEIEPEWAY True H1975_Epitope_Rep2 1304.64010204144 1304.63900993586 59.13 2 0.22935898880680652 0.00039635354736424893 0.00048599772080657643 ['ENSG00000100442|ENST00000396062|FKBP3'] 107024 18720 SVFKDFYEL True PC9_epitope_Rep6 1146.55972646242 1146.5586299358602 84.648 2 0.2293488549493836 0.00039635354736424893 0.000486110909356679 ['ENSG00000100994|ENST00000216962|PYGB'] 114452 8964 TPVPSDIDISR True H1975_Epitope_Rep3 1198.61936659686 1198.61826993586 39.475 2 0.22934592349633062 0.00039635354736424893 0.00048614365669878847 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000413059.1_1_X:57420873-57421110:-|nuORF'] 16291 7659 EEFQFIKKA True NCI_RA007_Epitope_Rep3 1138.60225998074 1138.60116993586 37.25 2 0.2293299120973621 0.00039635354736424893 0.00048632255953541173 ['ENSG00000140259|ENST00000267812|MFAP1'] 49409 7424 KEVEQFTQVA True H1975_Epitope_Rep3 1177.5979028762902 1177.5968099358602 33.534 2 0.22932806410323034 0.00039635354736424893 0.0004863432122878967 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 60962 10033 LIDQDARDLY True H1975_Epitope_Rep2 1220.60371653272 1220.60260993586 43.583 2 0.22931462631094002 0.00039635354736424893 0.00048649341639280723 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2'] 78384 20735 NYLDQIAKF True PC9_epitope_Rep1 1110.5709598524597 1110.5698699358602 84.584 2 0.22930581788791862 0.00039635354736424893 0.0004865918998779495 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'KDM5C|p.Y601Lfs*21|1|0.69|ENSG00000126012|chrX:53201918-53201919|-/A|frameshift_variant', 'KDM5C|p.T270Qfs*2|1|0.16|ENSG00000126012|chrX:53215951-53215951|G/-|frameshift_variant', 'KDM5C|p.E293Rfs*6|1|0.35|ENSG00000126012|chrX:53215881-53215881|C/-|frameshift_variant'] 140301 7847 YRDEFSHQV True PC9_epitope_Rep1 1179.53088594563 1179.52924490379 35.009 3 0.22929988822505673 0.00039635354736424893 0.00048665820835127775 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.T1015Pfs*15|1|0.53|ENSG00000109111|chr17:28688125-28688125|G/-|frameshift_variant'] 76490 19837 NQIEDNDDFQL True PC9_epitope_Rep2 1349.57353860325 1349.57244993586 81.694 2 0.22927023362304572 0.00039635354736424893 0.00048698995708776246 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 5489 7879 ALYDATYETK True NCI_RA007_Epitope_Rep2 1173.5553693579702 1173.55426993586 35.279 2 0.22925347688774822 0.00039635354736424893 0.0004871775165273647 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 75862 8870 NLQEVLGEEK True H1975_Epitope_Rep1 1157.5928174958497 1157.59172993586 39.031 2 0.22925202653574356 0.00039635354736424893 0.00048719375383739027 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF'] 133770 9146 VYERELQTF True NCI_RA007_Epitope_Rep3 1183.5873381925899 1183.58624993586 43.062 2 0.22924787670706587 0.00039635354736424893 0.0004872402159407765 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 23633 17929 EWSPYTKIFQF True NCI_RA007_Epitope_Rep2 1444.7027022979998 1444.70160993586 74.476 2 0.2292360965921568 0.00039635354736424893 0.0004873721320933301 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 139179 9522 YLEETSIRY True H1975_Epitope_Rep1 1172.57135377528 1172.5702499358601 41.549 2 0.22921306018729382 0.00039635354736424893 0.00048763020205403037 ['ENSG00000158796|ENST00000368006|DEDD', 'nc|ENSG00000158796|O75618-2|DEDD'] 104361 14944 SQITAIEAQHL True PC9_epitope_Rep1 1209.63535101417 1209.63424993586 62.304 2 0.22920824983585558 0.00039635354736424893 0.0004876841082843388 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 41306 17615 HVVDFFNRV True PC9_epitope_Rep1 1131.58252759567 1131.5814299358601 72.548 2 0.22920145294748456 0.00039635354736424893 0.000487760286430948 ['ENSG00000172081|ENST00000357066|MOB3A'] 89183 6698 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 31.171 2 0.22919858061737247 0.00039635354736424893 0.0004877924825127573 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 65755 6799 LSDDHGASWRY True H1975_Epitope_Rep3 1305.5738133867699 1305.57217490379 31.105 3 0.22919132569770226 0.00039635354736424893 0.00048787381273877385 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 47729 17372 IYDPNLAFLRF True NCI_RA007_Epitope_Rep4 1367.7237720957498 1367.72266993586 75.231 2 0.2291866703043032 0.00039635354736424893 0.00048792600851774474 ['ENSG00000197943|ENST00000564138|PLCG2'] 134581 20369 VYSFGFERL True PC9_epitope_Rep5 1116.56039516876 1116.55928993586 83.384 2 0.22918635100929335 0.00039635354736424893 0.00048792958862495624 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 108545 17379 SYNDYVREF True PC9_epitope_Rep5 1191.51965255559 1191.5185499358602 71.849 2 0.22917893336452783 0.00039635354736424893 0.00048801276666178534 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant'] 71817 14645 MEIDPSLGV True H1975_Epitope_Rep2 959.46338354943 959.46283496793 61.492 1 0.22917700589626275 0.00039635354736424893 0.0004880343827276467 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 138731 10483 YIQENLELVEK True H1975_Epitope_Rep1 1376.71874628496 1376.7176499358602 45.278 2 0.2291760243532839 0.00039635354736424893 0.0004880453908513853 ['ENSG00000100714|ENST00000652337|MTHFD1'] 65831 15198 LSDLFSDDY True H1975_Epitope_Rep2 1073.45532096353 1073.45477496793 63.615 1 0.22917363813319885 0.00039635354736424893 0.0004880721536384517 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 53814 12276 KTEDPDLPAFY True H1975_Epitope_Rep2 1294.6081332068197 1294.60702993586 52.303 2 0.22917036093163437 0.00039635354736424893 0.00048810891167861873 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 135198 16053 WESEPHPYVFF True H1975_Epitope_Rep2 1436.6401020414398 1436.63900993586 66.95 2 0.22916092153098797 0.00039635354736424893 0.0004882148022465722 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 122549 5827 VGEVIVTK True NCI_RA007_Epitope_Rep2 843.50656869075 843.50546993586 27.284 2 0.2291480627821617 0.00039635354736424893 0.0004883590879172732 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 48268 8201 IYQRDPLKL True NCI_RA007_Epitope_Rep4 1144.6604435631998 1144.65934993586 38.332 2 0.22914010538177448 0.00039635354736424893 0.0004884483978805066 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 17856 5736 EHVKEVQQL True PC9_epitope_Rep5 1108.58767254576 1108.58656993586 27.057 2 0.22913956542212666 0.00039635354736424893 0.0004884544587166773 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 115083 14275 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61225490379 62.811 3 0.22912925608982107 0.00039635354736424893 0.0004885701914189756 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 4726 12694 ALDEGDIALLK True NCI_RA007_Epitope_Rep1 1156.6339540318397 1156.6328499358601 53.36 2 0.22912807487363718 0.00039635354736424893 0.0004885834535241502 ['ENSG00000161057|ENST00000292644|PSMC2'] 29266 7770 FVAEPDNKNVY True H1975_Epitope_Rep2 1294.61936659686 1294.61826993586 34.835 2 0.229126109825049 0.00039635354736424893 0.0004886055169081425 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 116317 8563 TTEESLRNYY True H1975_Epitope_Rep1 1274.5778957077 1274.57678993586 37.864 2 0.2291166929947915 0.00039635354736424893 0.000488711262081668 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 22323 10588 ETDNNIVVY True H1975_Epitope_Rep1 1065.4978544818498 1065.4967499358602 45.68 2 0.22910264920569276 0.00039635354736424893 0.000488869007793718 ['ENSG00000150787|ENST00000280362|PTS'] 53976 10133 KVADGFKVV True PC9_epitope_Rep1 961.5596668927699 961.55856993586 43.85 2 0.2290861844954736 0.00039635354736424893 0.0004890540113559932 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 94717 4987 RSDTPLIYK True NCI_RA007_Epitope_Rep3 1091.5975089534697 1091.59640993586 26.614 2 0.22907554443382258 0.00039635354736424893 0.000489173604377143 ['ENSG00000196305|ENST00000443024|IARS1'] 24434 7279 FADLSEAANR True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 32.973 2 0.2290641272009522 0.00039635354736424893 0.0004893019653434721 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 29760 11957 FVNVVPTFGK True H1975_Epitope_Rep1 1106.6124307416198 1106.61132993586 50.997 2 0.22905087210036734 0.00039635354736424893 0.0004894510313663237 ['ENSG00000149806|ENST00000529639|FAU'] 76622 12000 NQQEFVRAL True PC9_epitope_Rep4 1103.5723568347898 1103.5712499358601 53.954 2 0.22904783176179155 0.00039635354736424893 0.000489485229244849 ['ENSG00000105372|ENST00000598742|RPS19'] 43769 19096 IHLIDPNTL True PC9_epitope_Rep5 1034.5760452329 1034.57494993586 78.482 2 0.22904588410671398 0.00039635354736424893 0.0004895071378250807 ['ENSG00000169251|ENST00000351193|NMD3', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 120069 10653 VDTFLEDVK True H1975_Epitope_Rep3 1064.5389910178399 1064.5378899358602 46.05 2 0.2290357149733686 0.00039635354736424893 0.0004896215432953694 ['CON__P34955'] 108534 14139 SYMPTVSHL True PC9_epitope_Rep4 1033.49026700361 1033.4891699358602 62.288 2 0.22900926609451788 0.00039635354736424893 0.0004899192258909182 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 65065 19998 LQLDPAQIYRV True PC9_epitope_Rep2 1314.7295857521801 1314.7284899358601 82.325 2 0.22899368288520322 0.00039635354736424893 0.0004900947001847535 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 98046 9018 SEQLDQPISA True H1975_Epitope_Rep2 1086.51931820242 1086.5187749679299 39.639 1 0.22898938308757882 0.00039635354736424893 0.0004901431290344688 ['KDM5A-RAE1|1|fusion', 'ENST00000462438.1_1_20:55948707-55953152:+|nuORF', 'ENSG00000101146|ENST00000395841|RAE1'] 140241 14753 YQYPVIIHL True H1975_Epitope_Rep3 1144.6280808057597 1144.6269899358601 62.125 2 0.228976360692371 0.00039635354736424893 0.0004902898302567313 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 15837 9366 EDENFILK True H1975_Epitope_Rep3 1006.4971262058599 1006.49602993586 41.027 2 0.22897525256091256 0.00039635354736424893 0.0004903023157264584 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 85754 16548 QHDFTSQIF True PC9_epitope_Rep4 1121.51417325233 1121.5130699358601 71.626 2 0.2289715435717394 0.00039635354736424893 0.0004903441077388273 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 95992 18718 RYLMDPDTF True PC9_epitope_Rep2 1156.52229540788 1156.52118993586 77.373 2 0.2289598256099835 0.00039635354736424893 0.0004904761664421499 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 74834 4451 NHEEEISTLR True H1975_Epitope_Rep3 1226.58912909774 1226.58748490379 22.243 3 0.22895666969197123 0.00039635354736424893 0.0004905117390027119 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 142505 20293 YYIFIPSKF True PC9_epitope_Rep4 1176.6219327961599 1176.62082993586 86.2 2 0.22895547616915998 0.00039635354736424893 0.0004905251927081263 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 112163 2840 TKDGVVEITGK True NCI_RA007_Epitope_Rep1 1145.62920300457 1145.6275649037902 14.871 3 0.22894929530100724 0.00039635354736424893 0.0004905948710149781 ['ENSG00000106211|ENST00000248553|HSPB1'] 20893 20204 EQLNGILLHL True PC9_epitope_Rep4 1148.65535818276 1148.6542699358602 85.852 2 0.22892773064899982 0.00039635354736424893 0.0004908380519211236 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 74901 16882 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69592490379 69.76 3 0.228927045944472 0.00039635354736424893 0.0004908457751979617 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 142600 16139 YYLTPDGQRF True PC9_epitope_Rep2 1258.59823722946 1258.5971499358602 67.336 2 0.22892356261968286 0.00039635354736424893 0.0004908850680216802 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 140404 11453 YRFETVQKL True PC9_epitope_Rep2 1182.6397081186199 1182.63805490379 49.373 3 0.22892336558556733 0.00039635354736424893 0.0004908872907128451 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 40738 6792 HRTELETKL True PC9_epitope_Rep3 1125.61422164677 1125.61258490379 31.145 3 0.22890834613070954 0.00039635354736424893 0.000491056751042282 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 131712 7524 VTNWDDMEK True NCI_RA007_Epitope_Rep3 1136.4808245187198 1136.4797299358602 36.718 2 0.22889675175793053 0.00039635354736424893 0.0004911876072633868 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 49406 7280 KEVEQFTQVA True H1975_Epitope_Rep1 1177.5979028762902 1177.5968099358602 33.014 2 0.2288922826032843 0.00039635354736424893 0.0004912380563046263 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 116341 7859 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 35.175 2 0.22886975015869312 0.00039635354736424893 0.0004914924878945094 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 75146 8468 NHYQKQLEI True PC9_epitope_Rep1 1171.5985715826298 1171.59746993586 37.407 2 0.2288641223161755 0.00039635354736424893 0.0004915560569316825 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 65819 6636 LSDKNIEQY True H1975_Epitope_Rep2 1108.540053647 1108.53894993586 30.433 2 0.22882637167276051 0.00039635354736424893 0.0004919826808890467 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 41394 20679 HYFDPQYFEF True PC9_epitope_Rep4 1391.58225281215 1391.5811499358601 87.701 2 0.228824423109868 0.00039635354736424893 0.0004920047118807673 ['ENSG00000084623|ENST00000677711|EIF3I'] 44782 20168 IMLEALERV True PC9_epitope_Rep1 1072.59506642532 1072.59396993586 82.406 2 0.22881802736016546 0.00039635354736424893 0.0004920770309543986 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 102464 20776 SLVDEFKEL True PC9_epitope_Rep2 1078.55464108198 1078.55354993586 85.357 2 0.22881592131047146 0.00039635354736424893 0.0004921008471601194 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 54761 17917 KYNANFVTF True PC9_epitope_Rep1 1102.54474510462 1102.54364993586 73.71 2 0.22880960464147818 0.00039635354736424893 0.0004921722859758141 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 55011 10541 KYQKGFSLW True NCI_RA007_Epitope_Rep4 1155.6076797143498 1155.60658993586 47.393 2 0.22880393656208792 0.00039635354736424893 0.0004922363983783985 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 89184 6787 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 31.513 2 0.22878983486467494 0.00039635354736424893 0.0004923959409166277 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 45 13171 [Acetylation]-AAAAVVEFQR True H1975_Epitope_Rep3 1102.5771081783598 1102.5760099358602 55.913 2 0.22878636102247984 0.00039635354736424893 0.0004924352509290353 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 17037 5626 EGELTVAQGR True NCI_RA007_Epitope_Rep2 1058.5356369728997 1058.53452993586 26.497 2 0.2287646031227426 0.00039635354736424893 0.0004926815350388188 ['ENSG00000176619|ENST00000325327|LMNB2', 'LMNB2|p.R138M|1|0.32|ENSG00000176619|chr19:2438520-2438520|C/A|missense_variant'] 15235 5771 EAEIATYR True NCI_RA007_Epitope_Rep2 951.46616043075 951.46506993586 27.065 2 0.22876418327694592 0.00039635354736424893 0.000492686288612807 ['CON__P05784', 'ENST00000513396.1_1_4:136292387-136292531:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 69676 13292 LVDTFLEDVK True NCI_RA007_Epitope_Rep2 1177.6230549949698 1177.6219499358601 56.339 2 0.22875101602150077 0.00039635354736424893 0.000492835394137216 ['CON__P34955'] 1603 12525 AEFARIMSI True NCI_RA007_Epitope_Rep3 1036.5375515491999 1036.5364499358602 56.498 2 0.22874633139807163 0.00039635354736424893 0.0004928884535614632 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 36063 17501 GVAANDVIVHI True PC9_epitope_Rep1 1106.6084079903399 1106.60730993586 72.112 2 0.2287437761651308 0.00039635354736424893 0.0004929173972976145 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 112789 18823 TLIDLPGITKV True PC9_epitope_Rep6 1168.70672504928 1168.70562993586 85.045 2 0.22874048745851142 0.00039635354736424893 0.0004929546517756561 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3'] 9827 16957 AYLEAIHNF True PC9_epitope_Rep4 1076.52909504048 1076.52857496793 73.217 1 0.2287309288136813 0.00039635354736424893 0.0004930629481697231 ['ENSG00000042753|ENST00000263270|AP2S1'] 41260 7083 HVLVTLGEK True PC9_epitope_Rep2 994.58113061334 994.58002993586 32.641 2 0.22869099233242063 0.00039635354736424893 0.0004935156740061365 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 14269 4083 DSSPDSAEDVR True NCI_RA007_Epitope_Rep2 1176.48947462612 1176.4883699358602 20.52 2 0.2286879976542891 0.00039635354736424893 0.000493549638922784 ['CON__P12763', 'ENST00000478441.1_1_3:186333572-186335301:+|nuORF', 'ENSG00000145192|ENST00000411641|AHSG'] 120897 13050 VENIQVFDFK True H1975_Epitope_Rep3 1237.6342883850095 1237.6331899358602 55.437 2 0.22866316966539255 0.00039635354736424893 0.0004938313223166188 ['nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000198074|ENST00000359579|AKR1B10', 'ENSG00000227471|ENST00000457545|AKR1B15'] 7766 4771 ASREEILAQAK True PC9_epitope_Rep4 1214.66190011518 1214.66026490379 24.923 3 0.22865870417972825 0.00039635354736424893 0.0004938820021354865 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 49407 7430 KEVEQFTQVA True H1975_Epitope_Rep2 1177.5979028762902 1177.5968099358602 33.524 2 0.2286523293137239 0.00039635354736424893 0.0004939543609907801 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 49972 13879 KIQEILTQV True PC9_epitope_Rep6 1070.63356010902 1070.6324699358602 65.213 2 0.22864428114039617 0.00039635354736424893 0.0004940457281574612 ['ENSG00000136231|ENST00000258729|IGF2BP3', 'nc|ENSG00000136231|O00425-2|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 142827 9119 YYSPTKNEI True PC9_epitope_Rep2 1113.53423999057 1113.5331499358601 40.415 2 0.22864067730269833 0.00039635354736424893 0.0004940866463457168 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 86935 19280 QLVDIIEKV True PC9_epitope_Rep4 1055.62266107215 1055.6215699358602 82.266 2 0.22863957725069414 0.00039635354736424893 0.000494099137079113 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 32344 14906 GFGFVTFDDHD True NCI_RA007_Epitope_Rep5 1255.51456717515 1255.51346993586 64.004 2 0.22863226652694163 0.00039635354736424893 0.0004941821560231834 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 82972 11668 PSEYDTPLY True H1975_Epitope_Rep2 1083.47605640811 1083.47547496793 49.953 1 0.2286029548424327 0.00039635354736424893 0.0004945151535194512 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 33984 15056 GLSTEGIYRV True PC9_epitope_Rep3 1093.57677350889 1093.57566993586 63.043 2 0.2285975414471448 0.00039635354736424893 0.0004945766774078516 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 84332 10514 PYTKVEESF True PC9_epitope_Rep4 1098.5233409536997 1098.5222499358601 48.164 2 0.22857153148513246 0.00039635354736424893 0.0004948723908604403 ['ENSG00000182858|ENST00000330817|ALG12'] 62343 15565 LLGINVTDFTR True NCI_RA007_Epitope_Rep1 1247.68738658703 1247.68628993586 64.631 2 0.2285476191841449 0.00039635354736424893 0.0004951444120092039 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 84215 16221 PYLFHVVTF True NCI_RA007_Epitope_Rep4 1121.59096702105 1121.5898699358602 70.343 2 0.22853560593366798 0.00039635354736424893 0.0004952811287490501 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 30185 16652 FYQPKIQQF True PC9_epitope_Rep2 1197.61824439805 1197.6171499358602 69.295 2 0.2285325388565986 0.00039635354736424893 0.000495316039673561 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 86682 18730 QLIDKVWQL True PC9_epitope_Rep6 1141.64954452633 1141.64844993586 84.686 2 0.22852304074567245 0.00039635354736424893 0.0004954241673343331 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 95890 7045 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60802993586 33.777 2 0.2284978020906232 0.00039635354736424893 0.0004957116023650903 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 75611 7694 NLDQATRVAY True H1975_Epitope_Rep3 1149.5778361380499 1149.5767299358602 34.576 2 0.22848840049167748 0.00039635354736424893 0.0004958187169560278 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 127494 6717 VNLPINGNGKQ True NCI_RA007_Epitope_Rep5 1152.62512068364 1152.62402993586 32.509 2 0.2284856634415904 0.00039635354736424893 0.0004958499051646071 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 1780 4787 AEHDSILAEKA True H1975_Epitope_Rep2 1182.5880664685799 1182.58642490379 23.502 3 0.22848350804172124 0.00039635354736424893 0.000495874466955618 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 116761 17454 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 72.427 2 0.22848205575312902 0.00039635354736424893 0.0004958910171526252 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 9822 17652 AYLEAIHNF True PC9_epitope_Rep2 1076.52909504048 1076.52857496793 73.177 1 0.2284688813743514 0.00039635354736424893 0.0004960411769311847 ['ENSG00000042753|ENST00000263270|AP2S1'] 16651 7143 EEQLQQIRAE True NCI_RA007_Epitope_Rep1 1242.6204292260197 1242.6193299358602 31.775 2 0.22845756145654633 0.00039635354736424893 0.0004961702362533428 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 90391 10499 REIDDYIVQA True H1975_Epitope_Rep2 1220.6037165327198 1220.60260993586 45.402 2 0.22844801597499806 0.00039635354736424893 0.0004962790912612045 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 75118 10832 NHVTPPNVSL True PC9_epitope_Rep6 1076.56145779792 1076.56036993586 52.519 2 0.2284457252185107 0.00039635354736424893 0.0004963052182136551 ['ENSG00000171223|ENST00000302754|JUNB'] 140737 10368 YSDDGQKWTVY True H1975_Epitope_Rep3 1360.5935457718401 1360.59244993586 44.935 2 0.22843072015023516 0.00039635354736424893 0.0004964763908743648 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2'] 117666 20457 TVTSDLLQV True PC9_epitope_Rep3 974.5284263341399 974.5273299358599 83.943 2 0.22841986842168355 0.00039635354736424893 0.0004966002205688672 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 4750 11973 ALDLEIATYR True H1975_Epitope_Rep1 1163.6186383208699 1163.61754993586 51.059 2 0.22840761249042382 0.00039635354736424893 0.0004967401109611981 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 45953 10759 ISEQFTAM[Oxidation]FR True NCI_RA007_Epitope_Rep1 1244.58595867404 1244.58486993586 45.843 2 0.22840417755239453 0.00039635354736424893 0.0004967793247707356 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 40990 17786 HTDWLLDLY True H1975_Epitope_Rep2 1174.56587447202 1174.56476993586 73.735 2 0.22840125054890717 0.00039635354736424893 0.0004968127423680155 ['ENSG00000133302|ENST00000265140|SLF1'] 95408 20480 RWFDKSFTF True PC9_epitope_Rep3 1232.59784330664 1232.59674993586 84.035 2 0.2283984161738345 0.00039635354736424893 0.0004968451045761283 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 108686 15000 SYQRAFNEF True PC9_epitope_Rep3 1160.5250722892 1160.5239699358601 62.824 2 0.22838259193342647 0.00039635354736424893 0.0004970258207895671 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 113794 8553 TNAENEFVTIK True NCI_RA007_Epitope_Rep3 1264.6299312805597 1264.62882993586 40.715 2 0.22837544712853836 0.00039635354736424893 0.0004971074375994012 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 80182 21151 PFVDHVFTF True PC9_epitope_Rep3 1107.53893144819 1107.5378299358601 86.643 2 0.22837533273771454 0.00039635354736424893 0.0004971087444224133 ['ENSG00000113460|ENST00000336767|BRIX1'] 135211 9211 WEVDVTGKEA True NCI_RA007_Epitope_Rep4 1132.540053647 1132.53894993586 42.277 2 0.22836785002246013 0.00039635354736424893 0.0004971942359035694 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 86577 8113 QLEDGRTLSDY True H1975_Epitope_Rep1 1295.59935942827 1295.5982699358601 36.151 2 0.22834838429582996 0.00039635354736424893 0.000497416704731716 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 73188 13522 MRYNEKELQAL True PC9_epitope_Rep3 1393.70238502817 1393.70074490379 57.063 3 0.22834797548455216 0.00039635354736424893 0.0004974213780021832 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 49371 6708 KESYSVYVYK True H1975_Epitope_Rep3 1264.6339540318397 1264.6328499358601 30.756 2 0.2283424486007419 0.00039635354736424893 0.0004974845621455264 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 61947 14521 LLDLDEELRY True H1975_Epitope_Rep1 1277.6503323719699 1277.6492299358601 61.058 2 0.22833666893236676 0.00039635354736424893 0.0004975506447719451 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'nc|ENSG00000119650|Q96FT9-3|IFT43', 'ENST00000554026.5_1_14:76452129-76542971:+|nuORF', 'nc|ENSG00000119650|Q96FT9-4|IFT43'] 115805 5213 TSDNGKDGLAY True H1975_Epitope_Rep1 1139.50948179471 1139.5083899358601 25.115 2 0.2283045435249933 0.00039635354736424893 0.0004979181155482153 ['nc|ENSG00000105325|Q9UM11-3|FZR1', 'ENSG00000105325|ENST00000441788|FZR1', 'nc|ENSG00000105325|Q9UM11|FZR1'] 33136 12555 GISQEQMQEFR True PC9_epitope_Rep1 1351.6190493270299 1351.61794993586 53.162 2 0.22829010907503458 0.00039635354736424893 0.0004980833145828332 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 109921 5204 TEFTPTEKDE True H1975_Epitope_Rep3 1195.52446315251 1195.52336993586 25.107 2 0.22828094467425428 0.00039635354736424893 0.000498188227627419 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 24352 15409 EYYDKHFTEF True PC9_epitope_Rep5 1377.5877321154096 1377.5866299358602 64.28 2 0.22827120028739767 0.00039635354736424893 0.0004982998046080538 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 71936 7213 MEQQTLSIAKA True H1975_Epitope_Rep2 1218.62782310558 1218.62672993586 32.679 2 0.2282626514109662 0.00039635354736424893 0.0004983977131799467 ['ENSG00000104738|ENST00000649973|MCM4'] 37904 6834 GYSFTTTAER True NCI_RA007_Epitope_Rep3 1131.51965255559 1131.5185499358602 33.991 2 0.2282433525400415 0.00039635354736424893 0.0004986188102595436 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 43729 9168 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 45.392 2 0.22823171561437083 0.00039635354736424893 0.000498752175990447 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 142315 13881 YYDPKHVIF True PC9_epitope_Rep4 1180.59169529704 1180.5905899358602 61.293 2 0.2282279541999362 0.00039635354736424893 0.0004987952915741463 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 74015 15234 NDEELNKLLGR True PC9_epitope_Rep5 1299.67827845531 1299.67663490379 63.607 3 0.2282279001187383 0.00039635354736424893 0.0004987959115124761 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6'] 133751 19262 VYEEILHQI True PC9_epitope_Rep1 1142.5971746003 1142.5960699358602 78.893 2 0.22822602521467844 0.00039635354736424893 0.000498817404208357 ['ENSG00000135842|ENST00000367511|NIBAN1'] 54348 21015 KYEELFPAF True PC9_epitope_Rep3 1142.5648118428596 1142.56370993586 86.112 2 0.2282230828055626 0.00039635354736424893 0.000498851135969812 ['ENSG00000105402|ENST00000263354|NAPA'] 140190 22031 YQTPRLWLF True PC9_epitope_Rep5 1222.6498788795 1222.6487899358601 89.769 2 0.22819283868029905 0.00039635354736424893 0.0004991979871334787 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 49434 7452 KEYAVNEVVA True H1975_Epitope_Rep3 1120.57643915572 1120.57534993586 33.642 2 0.22815423772272286 0.00039635354736424893 0.0004996410291357038 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 89627 12369 QYSDINNRW True PC9_epitope_Rep1 1194.5417849825 1194.5406899358602 52.436 2 0.22813785825494903 0.00039635354736424893 0.0004998291434614676 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 24035 18950 EYNNIFHTF True PC9_epitope_Rep4 1183.52982331647 1183.5287299358602 80.979 2 0.2281290530977564 0.00039635354736424893 0.0004999302979805278 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 14172 6174 DSDRGLQEGY True H1975_Epitope_Rep3 1138.4890807032998 1138.48798993586 28.759 2 0.22812568673936737 0.00039635354736424893 0.0004999689764664584 ['ENSG00000175931|ENST00000319380|UBE2O'] 71040 20425 LYIVHPTMF True PC9_epitope_Rep3 1119.57868808519 1119.57758993586 83.818 2 0.22811314056085213 0.00039635354736424893 0.0005001131548824483 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 108670 19230 SYQKVIELF True PC9_epitope_Rep4 1125.6070110080097 1125.6059099358602 82.068 2 0.22808070012920723 0.00039635354736424893 0.0005004861478623331 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 108397 18482 SYLKEFIHI True PC9_epitope_Rep4 1148.62299542532 1148.6213549037902 79.162 3 0.22807568526935978 0.00039635354736424893 0.0005005438325246574 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENSG00000131966|ENST00000254286|ACTR10'] 141658 11424 YTSYPMHDFY True H1975_Epitope_Rep1 1322.52777471114 1322.5266699358601 48.922 2 0.22807418580443473 0.00039635354736424893 0.0005005610817851812 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 49473 19934 KFAEEFYSF True PC9_epitope_Rep2 1166.5284263341398 1166.52732993586 82.073 2 0.22807103264996953 0.00039635354736424893 0.0005005973563917908 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 75572 8081 NLDDGIDDER True PC9_epitope_Rep4 1160.49456000656 1160.49346993586 38.536 2 0.22805927479391147 0.00039635354736424893 0.0005007326446987229 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 88550 8262 QTDDTWRTEY True H1975_Epitope_Rep2 1313.55240923585 1313.5513099358602 36.731 2 0.22805056973590077 0.00039635354736424893 0.0005008328305160141 ['ENSG00000121741|ENST00000610343|ZMYM2'] 15199 8674 EADEYLDKY True H1975_Epitope_Rep3 1144.49243474824 1144.4913299358602 38.363 2 0.22804794811585524 0.00039635354736424893 0.0005008630064717976 ['ENSG00000117724|ENST00000366955|CENPF'] 39704 6354 HLTDAYFK True NCI_RA007_Epitope_Rep5 993.49198125577 993.49088993586 31.116 2 0.22802030479056637 0.00039635354736424893 0.0005011813038841578 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 25303 11281 FDQLLAEEK True PC9_epitope_Rep4 1091.5498900547097 1091.5487899358602 51.169 2 0.22801629240768867 0.00039635354736424893 0.0005012275210893069 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 142612 19990 YYMEKELANF True PC9_epitope_Rep1 1306.5903749676997 1306.58926993586 81.717 2 0.22801344746895716 0.00039635354736424893 0.0005012602935130795 ['nc|ENSG00000105699|Q86X29-6|LSR', 'nc|ENSG00000105699|Q86X29-5|LSR', 'nc|ENSG00000105699|Q86X29-2|LSR', 'ENSG00000105699|ENST00000605618|LSR', 'nc|ENSG00000105699|Q86X29-3|LSR', 'nc|ENSG00000105699|Q86X29-4|LSR', 'nc|ENSG00000105699|Q86X29|LSR'] 24234 7238 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56954993586 32.852 2 0.22800427215799107 0.00039635354736424893 0.0005013660036463166 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 17837 6252 EHTQTVSQL True PC9_epitope_Rep1 1041.50908787189 1041.50798993586 28.861 2 0.2279828558928698 0.00039635354736424893 0.0005016128306851249 ['ENSG00000135968|ENST00000309863|GCC2'] 96142 7733 RYPDNLKHL True PC9_epitope_Rep3 1154.61964138038 1154.61799490379 34.739 3 0.22797696686367513 0.00039635354736424893 0.0005016807243753932 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 73798 19558 NAIDRLVNI True PC9_epitope_Rep3 1026.5821932425 1026.58108993586 80.464 2 0.22797205991524333 0.00039635354736424893 0.0005017373028526818 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 137552 8657 YEELQSLAGK True NCI_RA007_Epitope_Rep2 1136.5713537752797 1136.5702499358601 38.321 2 0.2279623910770013 0.00039635354736424893 0.0005018488059766292 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 113058 10281 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1189.6376598937302 1189.63656993586 44.597 2 0.22793239674945864 0.00039635354736424893 0.0005021948652291578 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 62151 12967 LLEKEILYY True H1975_Epitope_Rep2 1182.6536268472598 1182.65252993586 54.992 2 0.2279117006790046 0.00039635354736424893 0.0005024337855145966 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 70054 16881 LVNELTEFAK True PC9_epitope_Rep2 1162.6233893481399 1162.6222899358602 70.179 2 0.22790269701737217 0.00039635354736424893 0.0005025377614881423 ['CON__P02769'] 142135 19507 YVQDFLNHL True PC9_epitope_Rep4 1147.56620882519 1147.5651099358602 83.152 2 0.2278999882120707 0.00039635354736424893 0.0005025690475041325 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 24528 13799 FAFQAEVNR True PC9_epitope_Rep3 1080.53524305008 1080.5341499358601 58.155 2 0.22789821258439485 0.00039635354736424893 0.000502589556614901 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000559111.1_1_15:99797871-99798159:+|nuORF'] 119133 11903 VAIEHLDKI True PC9_epitope_Rep1 1036.59169529704 1036.5905899358602 50.651 2 0.22787239776648976 0.00039635354736424893 0.0005028878215088369 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 48115 15052 IYNQVKQII True PC9_epitope_Rep5 1117.64954452633 1117.64844993586 62.904 2 0.2278718353641235 0.00039635354736424893 0.0005028943214926337 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 63456 20556 LLVVYPWTQR True PC9_epitope_Rep3 1273.7182927924898 1273.71718993586 84.332 2 0.22785762011147787 0.00039635354736424893 0.0005030586427349367 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'HBE1|p.G73Efs*17|1|0.07|ENSG00000213931|chr11:5269551-5269551|C/-|frameshift_variant', 'ENSG00000213934|ENST00000330597|HBG1', 'ENSG00000213931|ENST00000396895|HBE1', 'ENSG00000196565|ENST00000336906|HBG2', 'CON__Q3SX09'] 84772 5585 QDVDNASLAR True PC9_epitope_Rep3 1087.52580056519 1087.52470993586 26.561 2 0.22785690654030585 0.00039635354736424893 0.0005030668926821238 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 8078 10210 ATDRWYDEY True H1975_Epitope_Rep2 1217.49891711101 1217.4978299358602 44.277 2 0.22785235867779752 0.00039635354736424893 0.0005031194759463154 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 21789 17547 ERYFISHVL True PC9_epitope_Rep3 1162.61349337078 1162.6118549037901 72.681 3 0.22785202202056276 0.00039635354736424893 0.00050312336866145 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 140818 4644 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 22.962 2 0.22784534731510192 0.00039635354736424893 0.0005032005534792554 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 55067 16419 KYTKIFNDF True PC9_epitope_Rep3 1174.60225998074 1174.60116993586 68.292 2 0.22783256730663728 0.00039635354736424893 0.0005033483718216011 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 118704 19664 TYTDVTPRQFF True PC9_epitope_Rep5 1373.6615657620098 1373.6604699358602 80.695 2 0.2278211870696703 0.00039635354736424893 0.0005034800365535601 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 139101 13595 YLDKEDTFFY True H1975_Epitope_Rep2 1339.5972341699498 1339.59612993586 57.429 2 0.22781539535866854 0.00039635354736424893 0.0005035470575706931 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 54039 10982 KVIDPATATSV True PC9_epitope_Rep1 1100.607739284 1100.60664993586 47.132 2 0.227798109185571 0.00039635354736424893 0.0005037471444177145 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 14278 5762 DSTANEVEAVK True NCI_RA007_Epitope_Rep2 1161.5513466066898 1161.5502499358602 27.03 2 0.22779321902722985 0.00039635354736424893 0.0005038037623020914 ['ENSG00000185624|ENST00000331483|P4HB'] 53164 15539 KQALKYFNL True PC9_epitope_Rep5 1123.6389798426299 1123.6378899358601 64.781 2 0.22779170438129315 0.00039635354736424893 0.0005038213000534202 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 27485 8305 FMEKETPLRY True H1975_Epitope_Rep2 1312.6485585501598 1312.64692490379 36.897 3 0.22779072541814369 0.00039635354736424893 0.0005038326355777458 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 137178 13119 YAYDGKDYL True PC9_epitope_Rep4 1106.4920408254197 1106.49094993586 58.356 2 0.227786990615088 0.00039635354736424893 0.0005038758836322906 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 49507 16247 KFIDPIYQVW True NCI_RA007_Epitope_Rep4 1307.69140933831 1307.6903099358601 70.461 2 0.22775291814703139 0.00039635354736424893 0.0005042706060326556 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 49487 11865 KFDQLLAEEK True PC9_epitope_Rep3 1219.6448530687096 1219.64320490379 50.656 3 0.22773167182296858 0.00039635354736424893 0.0005045168972654469 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 94926 9826 RTFTWLVGK True NCI_RA007_Epitope_Rep3 1106.6236641316598 1106.6225699358602 45.723 2 0.2277198516184417 0.00039635354736424893 0.0005046539714598031 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 93530 18550 RQLEEEGITFV True PC9_epitope_Rep5 1319.6721304457096 1319.6710299358601 76.375 2 0.2277131002021551 0.00039635354736424893 0.0005047322817050767 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 119419 14746 VAQLEQVYIR True PC9_epitope_Rep5 1217.6768219033297 1217.67572993586 61.719 2 0.2277070019776611 0.00039635354736424893 0.0005048030260032952 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 107046 11161 SVFVETFVQK True NCI_RA007_Epitope_Rep3 1182.6284747285797 1182.62736993586 51.008 2 0.2276942789952118 0.00039635354736424893 0.0005049506548412211 ['nc|ENSG00000170786|Q8N3Y7-2|SDR16C5', 'ENSG00000170786|ENST00000303749|SDR16C5'] 54992 11696 KYQIINEEF True NCI_RA007_Epitope_Rep2 1182.5920892198599 1182.59098993586 50.09 2 0.22767410066875624 0.00039635354736424893 0.000505184879252144 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 29369 10399 FVDKNNDLLY True H1975_Epitope_Rep2 1239.61355294043 1239.61244993586 45.013 2 0.22765899423574276 0.00039635354736424893 0.0005053603018785553 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 23592 23107 EWASRFWLW True PC9_epitope_Rep5 1279.61382772395 1279.6127299358602 93.868 2 0.22765543967407498 0.00039635354736424893 0.0005054015879125787 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 44785 20125 IMLEALERV True PC9_epitope_Rep3 1072.59506642532 1072.59396993586 82.664 2 0.22764557425657805 0.00039635354736424893 0.0005055161919127021 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 125954 19822 VLDFEHFLPM[Oxidation]L True H1975_Epitope_Rep1 1375.68461008615 1375.68350993586 82.49 2 0.22764478546096956 0.00039635354736424893 0.0005055253562725981 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 6829 12333 AQFEHTILL True NCI_RA007_Epitope_Rep4 1070.5760452329 1070.57494993586 54.437 2 0.2276437456408411 0.00039635354736424893 0.0005055374373322313 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 111849 14271 TIM[Oxidation]PKDIQL True PC9_epitope_Rep2 1073.57908238845 1073.5779899358602 60.16 2 0.22763875865368108 0.00039635354736424893 0.0005055953822344629 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 84327 11985 PYTKVEESF True PC9_epitope_Rep1 1098.5233409536997 1098.5222499358601 50.963 2 0.2276023769859827 0.00039635354736424893 0.0005060183105207413 ['ENSG00000182858|ENST00000330817|ALG12'] 106391 8793 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.5913299358601 40.488 2 0.22758210357570738 0.00039635354736424893 0.0005062541381053744 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 24309 15517 EYVEKFYRI True PC9_epitope_Rep1 1245.6393737654498 1245.63826993586 64.509 2 0.22758105553287836 0.00039635354736424893 0.0005062663323127777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 11064 3794 DAVTYTEHAK True NCI_RA007_Epitope_Rep2 1133.53530261973 1133.5342099358602 19.394 2 0.22756360795251682 0.00039635354736424893 0.0005064693820187261 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 23692 18670 EYDNFFQHL True PC9_epitope_Rep6 1211.5247379360299 1211.52364993586 84.458 2 0.22756300382208589 0.00039635354736424893 0.0005064764141707739 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF'] 114501 12527 TQAENQNWHL True PC9_epitope_Rep5 1239.5632487030698 1239.5621499358601 53.184 2 0.22756161449650641 0.00039635354736424893 0.0005064925864619931 ['nc|ENSG00000135269|Q9UGI8-2|TES', 'ENSG00000135269|ENST00000358204|TES'] 134606 18537 VYSKDNPNLLF True PC9_epitope_Rep3 1308.67140216972 1308.6703099358601 76.523 2 0.22755858044380303 0.00039635354736424893 0.00050652790581911 ['ENSG00000174231|ENST00000304992|PRPF8'] 71941 6087 [Acetylation]-M[Oxidation]EQVNELKEK True H1975_Epitope_Rep3 1304.6282177251398 1304.62710993586 28.427 2 0.2275585039945308 0.00039635354736424893 0.0005065287957957333 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'ENST00000540736.1_1_11:63953733-63960840:+|nuORF'] 108718 21559 SYRELFEFF True PC9_epitope_Rep4 1236.5815245361598 1236.5804299358601 91.107 2 0.22755273810476132 0.00039635354736424893 0.0005065959233512316 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 121407 10621 VEVTEFEDIK True H1975_Epitope_Rep1 1207.59723416995 1207.59612993586 45.81 2 0.2275473251349368 0.00039635354736424893 0.000506658950269971 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 133573 22355 VWVPFIYSF True NCI_RA007_Epitope_Rep5 1156.59571804832 1156.5946299358602 93.149 2 0.2275367528811915 0.00039635354736424893 0.0005067820729576783 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 41973 6458 IDEPLEGSEDR True H1975_Epitope_Rep1 1258.56772494682 1258.5666299358602 29.902 2 0.2275356997625666 0.00039635354736424893 0.0005067943390438234 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 108346 11537 SYLDRTEQL True PC9_epitope_Rep6 1123.55095268387 1123.54984993586 55.465 2 0.2275313127762489 0.00039635354736424893 0.0005068454392009868 ['ENSG00000065268|ENST00000585809|WDR18'] 14404 10395 DTDHYFLRY True H1975_Epitope_Rep3 1228.5512870370399 1228.55018993586 45.041 2 0.22752896056520247 0.00039635354736424893 0.0005068728401739682 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 118629 18556 TYSPALNKMF True PC9_epitope_Rep1 1170.5743309807401 1170.5732299358601 76.165 2 0.22752215394750333 0.00039635354736424893 0.0005069521390290574 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 92152 13787 RLEIEPEWAY True H1975_Epitope_Rep3 1304.64010204144 1304.63900993586 58.334 2 0.22751957225854358 0.00039635354736424893 0.0005069822196282702 ['ENSG00000100442|ENST00000396062|FKBP3'] 117282 10273 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep5 1134.59546072858 1134.5943699358602 44.502 2 0.2275154636177787 0.00039635354736424893 0.0005070300952288912 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 94892 6116 RTDTGEITSY True H1975_Epitope_Rep2 1141.5251318588498 1141.5240299358602 28.504 2 0.22750268675873697 0.00039635354736424893 0.0005071790055212271 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 108256 15934 SYIEHIFEI True NCI_RA007_Epitope_Rep4 1149.57062549929 1149.5695299358601 69.158 2 0.2275023145817181 0.00039635354736424893 0.0005071833437854767 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 92385 19204 RLPPDTLLQQV True PC9_epitope_Rep5 1278.7295857521801 1278.7284899358601 78.908 2 0.22749439278340433 0.00039635354736424893 0.0005072756926924045 ['ENSG00000169733|ENST00000310496|RFNG', 'ENST00000582478.5_1_17:80006905-80007747:-|nuORF', 'ENST00000580953.5_1_17:80006604-80007747:-|nuORF'] 18375 12886 EITALAPSTMK True PC9_epitope_Rep3 1160.61111041228 1160.61000993586 54.582 2 0.22748679884098577 0.00039635354736424893 0.0005073642354342042 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 107529 16922 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 70.334 2 0.22748321747059053 0.00039635354736424893 0.000507405998354636 ['ENSG00000073756|ENST00000367468|PTGS2'] 74884 5104 NHHLQETSF True PC9_epitope_Rep4 1111.50467119779 1111.50356993586 26.287 2 0.22746631531092185 0.00039635354736424893 0.0005076031436359259 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 14768 6798 DVNQQEFVR True NCI_RA007_Epitope_Rep4 1133.5465360097699 1133.54542993586 32.774 2 0.2274495249828015 0.00039635354736424893 0.0005077990606128049 ['ENSG00000105372|ENST00000598742|RPS19'] 92520 20625 RLYPWGVVEV True PC9_epitope_Rep2 1216.6604435631998 1216.65934993586 84.767 2 0.2274393081254438 0.00039635354736424893 0.0005079183125500823 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 118016 15955 TYDYNFHSF True PC9_epitope_Rep6 1192.48253877088 1192.4814499358602 73.665 2 0.22742382424411842 0.00039635354736424893 0.0005080990951526379 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 28971 13318 FTDVNSILRY True H1975_Epitope_Rep2 1226.62953735774 1226.62844993586 56.358 2 0.22741553532777958 0.00039635354736424893 0.0005081958992160456 ['ENSG00000136628|ENST00000366923|EPRS1'] 70804 15341 LYAPYSTHF True PC9_epitope_Rep4 1097.51819600361 1097.5170899358602 66.941 2 0.2274091850053733 0.00039635354736424893 0.0005082700754715773 ['ENSG00000013588|ENST00000014914|GPRC5A'] 38292 7313 HEFGRLLST True NCI_RA007_Epitope_Rep3 1058.55089311422 1058.5497899358602 35.883 2 0.22739530348470943 0.00039635354736424893 0.000508432259274404 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'ENST00000478436.1_1_3:145794517-145794673:-|nuORF', 'nc|ENSG00000152952|O00469-3|PLOD2'] 78162 17829 NYAQVLDKF True PC9_epitope_Rep4 1096.5553097883198 1096.5542099358602 76.613 2 0.2273783951746795 0.00039635354736424893 0.0005086298765041206 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 39724 8945 HLVDEPQNLIK True NCI_RA007_Epitope_Rep2 1304.7088503076 1304.7077499358602 39.416 2 0.22737762888905044 0.00039635354736424893 0.0005086388343540267 ['CON__P02769'] 74175 5355 NEEEIRANVA True H1975_Epitope_Rep3 1143.55201531303 1143.55090993586 25.666 2 0.2273771230968984 0.00039635354736424893 0.0005086447471317944 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 98022 8205 SEQFTAM[Oxidation]FR True H1975_Epitope_Rep1 1131.5018946969099 1131.5007899358602 36.503 2 0.2273746805291144 0.00039635354736424893 0.0005086733020458548 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 96141 5820 RYPDNLKHL True PC9_epitope_Rep2 1154.61964138038 1154.61799490379 27.78 3 0.22733867432488838 0.00039635354736424893 0.0005090944203351624 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 29030 13062 FTEQWTDGY True H1975_Epitope_Rep2 1145.4665543535698 1145.46597496793 55.365 1 0.2273286839720141 0.00039635354736424893 0.0005092113266284474 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 125928 17899 VLDDKLYVV True PC9_epitope_Rep2 1062.5961119711399 1062.5950099358602 74.152 2 0.22730433288044985 0.00039635354736424893 0.0005094963939618411 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 139191 12046 YLEQLHQLY True H1975_Epitope_Rep1 1205.60807363717 1205.6069699358602 51.345 2 0.22730388808726948 0.00039635354736424893 0.0005095016024453131 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 2130 10641 AELNEFLTR True H1975_Epitope_Rep1 1091.56112344475 1091.56002993586 45.887 2 0.22729522515899583 0.00039635354736424893 0.0005096030551182128 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 76489 20149 NQIEDNDDFQL True PC9_epitope_Rep1 1349.57353860325 1349.57244993586 82.332 2 0.22728996693167156 0.00039635354736424893 0.0005096646447825996 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 21498 15302 ERLQIDEQL True PC9_epitope_Rep3 1142.5931518490197 1142.5920499358601 64.011 2 0.22728606131914184 0.00039635354736424893 0.000509710396091144 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 66260 10288 LSFETTEESLR True NCI_RA007_Epitope_Rep3 1310.63541058382 1310.63430993586 47.539 2 0.22728182186245363 0.00039635354736424893 0.0005097600627963859 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 68028 9496 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60664993586 41.495 2 0.22727054675690633 0.00039635354736424893 0.0005098921781980081 ['ENSG00000167658|ENST00000309311|EEF2'] 141791 12397 YVDDASWMRY True H1975_Epitope_Rep1 1304.54957278488 1304.54846993586 52.718 2 0.22726505003711286 0.00039635354736424893 0.0005099565981519773 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 142596 16813 YYLTPDGQRF True PC9_epitope_Rep1 1258.59823722946 1258.5971499358602 69.497 2 0.2272616329115969 0.00039635354736424893 0.0005099966499830721 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 142602 16991 YYLTPDGQRF True PC9_epitope_Rep3 1258.59823722946 1258.5971499358602 70.516 2 0.227260697840044 0.00039635354736424893 0.0005100076104254113 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 17850 22163 EHVFWVVSL True PC9_epitope_Rep1 1114.5811306133398 1114.58002993586 90.067 2 0.22725511575689025 0.00039635354736424893 0.000510073045736468 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 85291 5879 QEQRLQGEVVA True H1975_Epitope_Rep2 1255.65206370747 1255.65096993586 27.599 2 0.22724788285433523 0.00039635354736424893 0.0005101578451113494 ['ENSG00000161654|ENST00000293406|LSM12', 'nc|ENSG00000161654|Q3MHD2-2|LSM12'] 59013 6964 LEVNLQAM[Oxidation]K True H1975_Epitope_Rep1 1060.5586812970398 1060.55758993586 31.827 2 0.22723740349858798 0.00039635354736424893 0.0005102807313664264 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 114398 9789 TPSQIGVILR True H1975_Epitope_Rep1 1082.64479349906 1082.64368993586 42.581 2 0.22723418720059696 0.00039635354736424893 0.0005103184532682811 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF'] 97749 11286 SEIPKLPAV True NCI_RA007_Epitope_Rep4 952.5593325395998 952.55822993586 50.307 2 0.22722880472887244 0.00039635354736424893 0.0005103815870950335 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 48334 15010 IYSIDFTRF True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 66.505 2 0.22722715393078208 0.00039635354736424893 0.0005104009517396698 ['ENSG00000175970|ENST00000344651|UNC119B'] 85893 14184 QHFEFEYQT True PC9_epitope_Rep4 1227.5196525555898 1227.5185499358602 62.462 2 0.22722320755601463 0.00039635354736424893 0.0005104472475751092 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 102490 12302 [Acetylation]-SLVIPEKFQH True H1975_Epitope_Rep1 1238.66592318276 1238.66482993586 52.346 2 0.22721682113841948 0.00039635354736424893 0.0005105221770434828 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 54343 15150 KYEELFPAF True NCI_RA007_Epitope_Rep4 1142.5648118428596 1142.56370993586 65.858 2 0.22721229880037674 0.00039635354736424893 0.0005105752426317543 ['ENSG00000105402|ENST00000263354|NAPA'] 2583 13023 AEQWNVNYV True H1975_Epitope_Rep2 1121.51417325233 1121.5130699358601 55.212 2 0.22721026032449643 0.00039635354736424893 0.0005105991641306617 ['ENSG00000006451|ENST00000005257|RALA'] 21050 6644 EQVANSAFVER True H1975_Epitope_Rep3 1248.6098645423197 1248.6087699358602 30.51 2 0.22719388030942653 0.00039635354736424893 0.0005107914243069598 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 74045 8585 NDLAVVDVR True NCI_RA007_Epitope_Rep5 999.53490869691 999.53380993586 39.702 2 0.22718923443597164 0.00039635354736424893 0.0005108459683961393 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 90392 10591 REIDDYIVQA True H1975_Epitope_Rep2 1220.6037165327198 1220.60260993586 45.761 2 0.22718291487810247 0.00039635354736424893 0.00051092017147391 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 7919 6871 ATANQIILK True NCI_RA007_Epitope_Rep4 970.58113061334 970.58002993586 33.047 2 0.22715656676459695 0.00039635354736424893 0.0005112296626917915 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 14550 6990 DTSRPLGDSM[Oxidation]Y True H1975_Epitope_Rep2 1256.5343170239998 1256.5332099358602 31.81 2 0.22713767515994518 0.00039635354736424893 0.0005114516837532943 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 22355 6150 ETDSSEEISRY True H1975_Epitope_Rep2 1314.5575541859398 1314.5564499358602 28.628 2 0.22712208853007626 0.00039635354736424893 0.0005116349363714073 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF'] 141816 7578 YVDDPYQKY True H1975_Epitope_Rep2 1189.5291546101298 1189.52804993586 34.1 2 0.22709909604783668 0.00039635354736424893 0.0005119053801547744 ['ENSG00000132313|ENST00000337109|MRPL35', 'MRPL35|p.W171C|1|0.36|ENSG00000132313|chr2:86210614-86210614|G/T|missense_variant'] 12321 6967 DIQEESTFSSR True H1975_Epitope_Rep1 1297.57862398369 1297.5775299358602 31.839 2 0.22709192891671698 0.00039635354736424893 0.0005119897112042329 ['ENSG00000138095|ENST00000260665|LRPPRC', 'LRPPRC|p.M465Ifs*9|1|0.25|ENSG00000138095|chr2:43963681-43963682|-/A|frameshift_variant', 'LRPPRC|p.P369Qfs*13|1|0.21|ENSG00000138095|chr2:43974199-43974199|G/-|frameshift_variant'] 115075 15060 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61225490379 63.185 3 0.22708916139619184 0.00039635354736424893 0.0005120222785789032 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 41914 6906 IDASQTEFEK True NCI_RA007_Epitope_Rep1 1166.54553295026 1166.54442993586 30.865 2 0.22708823848901563 0.00039635354736424893 0.0005120331395435933 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 35410 9366 GSDQAIITLR True NCI_RA007_Epitope_Rep2 1072.58767254576 1072.58656993586 41.041 2 0.2270726671642079 0.00039635354736424893 0.0005122164210036691 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 115071 16138 TRDELEWKL True PC9_epitope_Rep1 1188.6138872935999 1188.61225490379 66.89 3 0.2270716555049873 0.00039635354736424893 0.0005122283309621958 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 72753 15501 [Acetylation]-M[Oxidation]NPEYDYLFK True H1975_Epitope_Rep3 1376.5958549677 1376.5947499358601 65.04 2 0.22705525896309522 0.00039635354736424893 0.0005124214012473198 ['ENSG00000174903|ENST00000311481|RAB1B', 'ENST00000494188.1_1_2:65298326-65357199:-|nuORF', 'nc|ENSG00000138069|P62820-3|RAB1A', 'nc|ENSG00000138069|P62820-2|RAB1A', 'ENSG00000138069|ENST00000409784|RAB1A'] 106386 8672 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.5913299358601 41.192 2 0.2270546906437467 0.00039635354736424893 0.0005124280945514962 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 54591 19689 KYITQGQLLQF True PC9_epitope_Rep2 1337.73433677945 1337.7332299358602 81.12 2 0.22703567065691774 0.00039635354736424893 0.0005126521504694115 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 113797 13054 TNAENEFVTIK True PC9_epitope_Rep1 1264.6299312805597 1264.62882993586 55.08 2 0.22703562810969596 0.00039635354736424893 0.0005126526517869087 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 92150 13942 RLEIEPEWAY True H1975_Epitope_Rep2 1304.64010204144 1304.63900993586 58.776 2 0.22702825853610878 0.00039635354736424893 0.000512739492049918 ['ENSG00000100442|ENST00000396062|FKBP3'] 138313 18290 YHDINVYSL True PC9_epitope_Rep1 1122.53457434374 1122.53346993586 75.141 2 0.2270103861264379 0.00039635354736424893 0.0005129501550561474 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 41392 21382 HYFDPQYFEF True PC9_epitope_Rep2 1391.58225281215 1391.5811499358601 87.716 2 0.22699880328768426 0.00039635354736424893 0.0005130867289419967 ['ENSG00000084623|ENST00000677711|EIF3I'] 90944 6979 REYQELM[Oxidation]SV True NCI_RA007_Epitope_Rep3 1169.5386741284499 1169.5375699358601 34.561 2 0.22699021182572557 0.00039635354736424893 0.0005131880549062483 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 4873 6592 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep1 1219.5754535599897 1219.57434993586 30.162 2 0.22698725545355783 0.00039635354736424893 0.0005132229264040579 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 118190 20361 TYKDYVDLF True PC9_epitope_Rep2 1162.55464108198 1162.55354993586 83.741 2 0.2269706865357475 0.00039635354736424893 0.0005134184068908717 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 49352 7220 KESEMNVIAA True H1975_Epitope_Rep2 1090.5328600915798 1090.5317699358602 32.705 2 0.22696634949006653 0.00039635354736424893 0.0005134695877939681 ['ENSG00000148411|ENST00000277554|NACC2'] 16652 6328 EEQLQQIRAE True NCI_RA007_Epitope_Rep3 1242.6204292260197 1242.6193299358602 31.896 2 0.22695688908856845 0.00039635354736424893 0.0005135812465037642 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 85214 9382 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 41.05 2 0.22693974848281273 0.00039635354736424893 0.0005137836147671029 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 61389 7924 LITLEEEM[Oxidation]TK True H1975_Epitope_Rep3 1221.61625574281 1221.61514993586 35.449 2 0.22692894230017494 0.00039635354736424893 0.000513911237628898 ['ENSG00000185624|ENST00000331483|P4HB'] 26697 19179 FIVEEIQRI True PC9_epitope_Rep4 1145.6444591458899 1145.6433699358602 81.869 2 0.22690440011139998 0.00039635354736424893 0.0005142012032255326 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 2397 7603 AEQEPQPERLV True H1975_Epitope_Rep1 1294.6517293542997 1294.65062993586 34.236 2 0.22689198615291475 0.00039635354736424893 0.000514347936468968 ['ENSG00000124217|ENST00000244051|MOCS3'] 64490 13619 LPQLPITNFSR True H1975_Epitope_Rep3 1284.71902106848 1284.7179299358602 57.673 2 0.226887120145558 0.00039635354736424893 0.0005144054642357861 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 89192 7540 QVSPEAGVQKV True PC9_epitope_Rep5 1140.6138872935999 1140.61278993586 33.95 2 0.22688656147930591 0.00039635354736424893 0.000514412069411182 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 141742 19362 YTYEELLNRV True PC9_epitope_Rep4 1298.65066672514 1298.6495699358602 82.586 2 0.22688496822232945 0.00039635354736424893 0.000514430907139169 ['ENSG00000125977|ENST00000374980|EIF2S2'] 90394 10427 REIDDYIVQA True H1975_Epitope_Rep3 1220.6037165327198 1220.60260993586 45.167 2 0.2268551045929224 0.00039635354736424893 0.000514784125120746 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 22256 10171 ETALLVDRY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 44.125 2 0.2268505412054882 0.00039635354736424893 0.000514838120915655 ['ENSG00000176102|ENST00000323959|CSTF3', 'CSTF3|p.K529R|1|0.2|ENSG00000176102|chr11:33090587-33090587|T/C|missense_variant'] 86936 20241 QLVDIIEKV True PC9_epitope_Rep5 1055.62266107215 1055.6215699358602 82.906 2 0.22684693907016887 0.00039635354736424893 0.0005148807468104033 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 137745 7489 YENEVALRQ True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 34.178 2 0.22681407194532135 0.00039635354736424893 0.0005152698437585251 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 85867 16887 QHFDSVMQL True PC9_epitope_Rep2 1103.5069796969099 1103.50588993586 70.202 2 0.22680989017255154 0.00039635354736424893 0.0005153193707614382 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 54672 12426 KYLSVQGQLF True NCI_RA007_Epitope_Rep5 1181.64445914589 1181.6433699358602 54.453 2 0.22680957156542644 0.00039635354736424893 0.0005153231443942219 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 142499 15922 YYIFIPSKF True NCI_RA007_Epitope_Rep5 1176.6219327961599 1176.62082993586 67.971 2 0.22679709092889655 0.00039635354736424893 0.0005154709888286354 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 11492 6385 DFHVDEQTTVK True H1975_Epitope_Rep3 1317.62009487285 1317.61898993586 29.537 2 0.22678491074656945 0.00039635354736424893 0.0005156153151426691 ['CON__P34955'] 91071 20660 RFLNDPGHLLW True PC9_epitope_Rep5 1366.7146043943799 1366.7135099358602 84.522 2 0.2267765919808108 0.00039635354736424893 0.0005157139097750356 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 67930 11869 LTDDDLLRY True H1975_Epitope_Rep1 1122.55570371114 1122.55460993586 50.652 2 0.2267647564255762 0.00039635354736424893 0.0005158542182597449 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 32164 7985 GEVLKTYNV True H1975_Epitope_Rep3 1021.54441075145 1021.54330993586 35.684 2 0.2267395134975069 0.00039635354736424893 0.0005161535968227018 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 121066 6456 VEQVPDRAMEA True H1975_Epitope_Rep2 1243.58668656959 1243.58558993586 29.75 2 0.22672452693983844 0.00039635354736424893 0.0005163314183354713 ['ENSG00000100726|ENST00000262319|TELO2'] 48093 12024 IYNGDMEKI True PC9_epitope_Rep5 1081.51139637101 1081.51028993586 51.244 2 0.22672023422425208 0.00039635354736424893 0.0005163823644495922 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 108544 17475 SYNDYVREF True PC9_epitope_Rep1 1191.51965255559 1191.5185499358602 72.014 2 0.22671366345411686 0.00039635354736424893 0.0005164603563713534 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant'] 66231 5348 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 25.618 2 0.22670696203282908 0.00039635354736424893 0.0005165399112335162 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 36632 16023 GVIDLIFEK True NCI_RA007_Epitope_Rep5 1032.58554728744 1032.5844499358602 68.357 2 0.22670622644938296 0.00039635354736424893 0.0005165486443447883 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 96000 12542 RYLNEFEEL True NCI_RA007_Epitope_Rep5 1211.5822528121498 1211.5811499358601 54.898 2 0.22669263220762662 0.00039635354736424893 0.0005167100667421746 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 73677 11475 MYLKTVDKF True PC9_epitope_Rep4 1143.5998174525898 1143.59818490379 51.9 3 0.2266852479408734 0.00039635354736424893 0.0005167977711111622 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 23504 18766 EVVERLLSV True PC9_epitope_Rep2 1042.60225998074 1042.60116993586 77.554 2 0.22668003423792635 0.00039635354736424893 0.000516859704268102 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 64876 9428 LQEAEEWYK True NCI_RA007_Epitope_Rep1 1194.55570371114 1194.55460993586 40.667 2 0.22667962806241648 0.00039635354736424893 0.0005168645295068861 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 71032 20220 LYIVEPLKF True PC9_epitope_Rep4 1120.6532329244399 1120.65212993586 85.915 2 0.22666566466607177 0.00039635354736424893 0.000517030437800938 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 142511 19158 YYIFIPSKF True PC9_epitope_Rep6 1176.6219327961599 1176.62082993586 86.342 2 0.22664079143021668 0.00039635354736424893 0.0005173261054423685 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 54937 20840 KYPSPFFVF True PC9_epitope_Rep4 1130.5800679841798 1130.5789699358602 88.314 2 0.2266306262387371 0.00039635354736424893 0.0005174469876885358 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 77617 5915 NTEEEGLKY True H1975_Epitope_Rep3 1081.4927691014097 1081.49166993586 27.761 2 0.22662808792725853 0.00039635354736424893 0.000517477177158111 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 130631 5918 VSSTSEIGTRY True H1975_Epitope_Rep3 1198.5829810881398 1198.58188993586 27.772 2 0.2266200104613273 0.00039635354736424893 0.0005175732584563489 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 54029 13155 KVIDDTNITRL True PC9_epitope_Rep5 1286.7194149913 1286.7183099358601 55.605 2 0.22661402658815388 0.00039635354736424893 0.000517644448050866 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 102491 12285 [Acetylation]-SLVIPEKFQH True H1975_Epitope_Rep3 1238.66592318276 1238.66482993586 52.432 2 0.22660875814147008 0.00039635354736424893 0.000517707134413989 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 39082 4453 HHTFSTEIAK True NCI_RA007_Epitope_Rep2 1169.5829215184901 1169.58127490379 21.954 3 0.2265936176999883 0.00039635354736424893 0.000517887324636965 ['ENSG00000155660|ENST00000652332|PDIA4'] 132585 8550 VVESAYEVIK True H1975_Epitope_Rep3 1135.6124903112698 1135.6113899358602 37.877 2 0.22658931457001943 0.00039635354736424893 0.0005179385487572266 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 176 6200 AAEAEVELSAR True H1975_Epitope_Rep1 1144.5724164044398 1144.5713099358602 28.918 2 0.22658710837074375 0.00039635354736424893 0.0005179648131508143 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'ENST00000599652.5_1_19:49969097-49972327:+|nuORF'] 65809 10320 LSDIVIEKY True H1975_Epitope_Rep1 1078.5910265907 1078.58992993586 44.643 2 0.22657909706634444 0.00039635354736424893 0.0005180601974819075 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'nc|ENSG00000184465|A2RRH5-3|WDR27', 'ENST00000546953.1_1_6:170072345-170089107:-|nuORF'] 78305 22054 NYIPRFWTF True PC9_epitope_Rep1 1242.6185787512197 1242.61748993586 89.643 2 0.2265768558847624 0.00039635354736424893 0.0005180868846313932 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 95411 19109 RWFDKSFTF True PC9_epitope_Rep4 1232.59784330664 1232.5961849037901 81.594 3 0.22656871376562368 0.00039635354736424893 0.0005181838495397311 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 90395 10521 REIDDYIVQA True H1975_Epitope_Rep3 1220.6037165327198 1220.60260993586 45.535 2 0.22656125464430643 0.00039635354736424893 0.0005182726965732989 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 134343 8355 VYPDGIRHI True PC9_epitope_Rep4 1068.5716285587998 1068.5705299358601 39.595 2 0.22653739791113892 0.00039635354736424893 0.0005185569613527051 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 91691 4570 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 24.238 2 0.22653337045271987 0.00039635354736424893 0.0005186049659433698 ['ENSG00000100292|ENST00000216117|HMOX1'] 108264 21118 SYIEHIFEI True PC9_epitope_Rep2 1149.57062549929 1149.5695299358601 86.689 2 0.22653052339187538 0.00039635354736424893 0.0005186389036802481 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 84333 11857 PYTKVEESF True PC9_epitope_Rep5 1098.5233409536997 1098.5222499358601 50.606 2 0.22653045504854802 0.00039635354736424893 0.0005186397183786175 ['ENSG00000182858|ENST00000330817|ALG12'] 56150 16842 LAVNM[Oxidation]VPFPR True PC9_epitope_Rep1 1158.62195025994 1158.6208499358602 69.607 2 0.22652459631812957 0.00039635354736424893 0.0005187095631537973 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 116300 10640 TTDPYLTNSY True H1975_Epitope_Rep3 1173.5189838492502 1173.51788993586 46.0 2 0.22650508436415356 0.00039635354736424893 0.0005189422427059184 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 35479 9205 GSLFLQTPK True NCI_RA007_Epitope_Rep3 989.5545815123298 989.55348993586 43.302 2 0.2265047565319631 0.00039635354736424893 0.0005189461529907773 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 108303 20663 SYIRPEDIVNF True PC9_epitope_Rep1 1351.67721582615 1351.67610993586 84.303 2 0.2265027198904976 0.00039635354736424893 0.0005189704461067018 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 53967 6425 KTYGEIFEK True NCI_RA007_Epitope_Rep5 1113.57062549929 1113.5695299358601 31.383 2 0.2265007923172882 0.00039635354736424893 0.0005189934393044004 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 28444 5915 FSDGTHGGLRY True H1975_Epitope_Rep2 1208.55743504664 1208.55632993586 27.738 2 0.22649084686417167 0.00039635354736424893 0.0005191120906100894 ['ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 31321 11154 GDLGIEIPAEK True NCI_RA007_Epitope_Rep2 1140.60265390356 1140.60154993586 47.969 2 0.22648382541195053 0.00039635354736424893 0.0005191958743715548 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 55048 20198 KYSPFVVSF True PC9_epitope_Rep2 1072.5593325396 1072.55822993586 83.107 2 0.22648373404392005 0.00039635354736424893 0.0005191969647136769 ['ENSG00000086544|ENST00000263370|ITPKC'] 113950 8654 TPAEVGVLVGK True H1975_Epitope_Rep1 1068.6179100448796 1068.6168099358601 38.217 2 0.2264806987711179 0.00039635354736424893 0.0005192331875049703 ['ENSG00000108518|ENST00000225655|PFN1'] 1384 5777 AEEEAATRIPA True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 27.215 2 0.22646461606436907 0.00039635354736424893 0.000519425160023591 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 54934 21626 KYPSPFFVF True PC9_epitope_Rep2 1130.5800679841798 1130.5789699358602 88.66 2 0.22646276748514893 0.00039635354736424893 0.0005194472303001698 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 141259 5085 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 24.641 2 0.22643745007133265 0.00039635354736424893 0.0005197495908248253 ['ENSG00000125398|ENST00000245479|SOX9'] 35481 7454 GSLFLRTPK True NCI_RA007_Epitope_Rep4 1017.5971150306499 1017.59600993586 35.315 2 0.22642828787874286 0.00039635354736424893 0.0005198590564645777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000437325.2_1_1:235901419-235901638:+|nuORF'] 38820 11823 HHALPITDL True PC9_epitope_Rep4 1015.54507945779 1015.5439899358599 53.245 2 0.2264227807705691 0.00039635354736424893 0.0005199248639759147 ['ENSG00000065268|ENST00000585809|WDR18'] 18346 6745 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.6049299358601 30.899 2 0.22639123863976487 0.00039635354736424893 0.0005203019395702979 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 22398 11007 ETEGPHVLLY True H1975_Epitope_Rep3 1156.5764391557198 1156.57534993586 47.427 2 0.2263865602245421 0.00039635354736424893 0.0005203578918167189 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'CON__P01030'] 137560 6610 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep1 1078.5004977145798 1078.49940993586 30.481 2 0.2263826294344263 0.00039635354736424893 0.0005204049073893646 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 137662 16172 YEILTPNSIPK True PC9_epitope_Rep4 1273.69180326113 1273.69070993586 70.149 2 0.22638071526762632 0.00039635354736424893 0.0005204278039854658 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 103147 11011 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 47.675 2 0.22638018995374168 0.00039635354736424893 0.0005204340877838108 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 111014 9213 THDDSHLVSL True PC9_epitope_Rep2 1122.5305515924601 1122.5294499358602 40.777 2 0.22637557066341168 0.00039635354736424893 0.0005204893469568233 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 70058 16244 LVNELTEFAK True PC9_epitope_Rep4 1162.6233893481399 1162.6222899358602 70.425 2 0.22637537363333848 0.00039635354736424893 0.0005204917040988896 ['CON__P02769'] 66197 9795 LSERYAELY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 42.665 2 0.2263750292201301 0.00039635354736424893 0.0005204958244644618 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 92585 6497 RMQKEITAL True NCI_RA007_Epitope_Rep2 1088.60121443492 1088.60010993586 29.881 2 0.22637269347516106 0.00039635354736424893 0.0005205237688647973 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48397 9018 IYTSSVNRL True PC9_epitope_Rep4 1051.56620882519 1051.5651099358602 42.259 2 0.2263619034152261 0.00039635354736424893 0.0005206528785906882 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 40522 5631 HRDYETATL True PC9_epitope_Rep4 1104.51998690876 1104.5188899358602 28.457 2 0.22635855430869545 0.00039635354736424893 0.0005206929592508656 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 8299 14789 ATIIDILTK True NCI_RA007_Epitope_Rep5 986.60119735158 986.6006449679301 63.558 1 0.22634953044591904 0.00039635354736424893 0.0005208009683505895 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 108085 20758 SYANYFIRL True PC9_epitope_Rep3 1145.58694426977 1145.58584993586 85.115 2 0.22634759568398058 0.00039635354736424893 0.0005208241289755695 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 77798 10014 NTVELLVEDK True H1975_Epitope_Rep3 1158.6132185872598 1158.6121299358601 43.557 2 0.22634492438014758 0.00039635354736424893 0.00052085610828579 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 52521 7158 KLEAEIATYR True NCI_RA007_Epitope_Rep1 1192.6451874218799 1192.6435349037902 31.832 3 0.22634348596187098 0.00039635354736424893 0.0005208733290165631 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 102945 10211 SPEELLLR True H1975_Epitope_Rep3 955.5338460677499 955.53274993586 44.322 2 0.22633096291128452 0.00039635354736424893 0.0005210232790042195 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion', 'ENSG00000120756|ENST00000457734|PLS1'] 34487 13382 GPLLEEQALTK True PC9_epitope_Rep2 1197.6605031328497 1197.6594099358601 56.755 2 0.22632751000786266 0.00039635354736424893 0.0005210646314052178 ['ENSG00000171262|ENST00000397609|FAM98B', 'nc|ENSG00000171262|Q52LJ0-1|FAM98B'] 72170 6154 M[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep5 1137.49720323929 1137.4961099358602 30.351 2 0.2263217797144126 0.00039635354736424893 0.0005211332653795983 ['ENSG00000171858|ENST00000343986|RPS21'] 141425 6437 YTETEPYHNY True H1975_Epitope_Rep1 1315.5356965425499 1315.5351749679298 29.82 1 0.2263163704978607 0.00039635354736424893 0.0005211980620120842 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 68027 9360 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60664993586 40.965 2 0.22627896076304277 0.00039635354736424893 0.000521646411968115 ['ENSG00000167658|ENST00000309311|EEF2'] 56722 12159 LDLEIATYR True NCI_RA007_Epitope_Rep1 1092.58152453616 1092.5804299358601 51.262 2 0.22626186632716178 0.00039635354736424893 0.0005218514149609483 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 57583 9217 LEDVRNGIYP True H1975_Epitope_Rep1 1174.59823722946 1174.5971499358602 40.362 2 0.22626174973769828 0.00039635354736424893 0.000521852813423739 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2', 'ENST00000486701.1_1_2:27663393-27664286:+|nuORF', 'nc|ENSG00000185189|Q9NSY0-2|NRBP2', 'ENST00000423469.6_1_8:144917834-144920143:-|nuORF', 'nc|ENSG00000185189|Q9NSY0-4|NRBP2', 'ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 118280 22762 TYLPREILNLI True PC9_epitope_Rep1 1343.7812869718698 1343.78018993586 92.363 2 0.22625671041658654 0.00039635354736424893 0.0005219132624714715 ['ENSG00000163428|ENST00000295628|LRRC58'] 90713 7403 REQQLAEIEA True H1975_Epitope_Rep2 1185.5989655054498 1185.5978699358602 33.418 2 0.22624203840847362 0.00039635354736424893 0.0005220893001765755 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 133940 10989 VYIKHPVSL True PC9_epitope_Rep3 1054.61751612206 1054.61640993586 47.254 2 0.2262311644075753 0.00039635354736424893 0.0005222198070630774 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 105598 11334 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45826993586 48.575 2 0.22622513399176827 0.00039635354736424893 0.0005222921966291696 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 24435 7828 FADLSEAANR True NCI_RA007_Epitope_Rep1 1092.5199869087598 1092.5188899358602 34.44 2 0.22622203464051266 0.00039635354736424893 0.0005223294053921445 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 15095 13527 DYTYEELLNR True NCI_RA007_Epitope_Rep1 1314.6091958359798 1314.60808993586 56.625 2 0.2261810286528127 0.00039635354736424893 0.0005228219466229543 ['ENSG00000125977|ENST00000374980|EIF2S2'] 54417 13493 KYFLWEEKF True NCI_RA007_Epitope_Rep1 1288.6492101731599 1288.64810993586 56.489 2 0.22614895847081892 0.00039635354736424893 0.0005232074806140163 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 111379 7791 THSDIQVKL True PC9_epitope_Rep2 1039.56620882519 1039.5651099358602 35.34 2 0.22612981329296702 0.00039635354736424893 0.0005234377716953796 ['ENSG00000105223|ENST00000409735|PLD3'] 133991 7002 VYISEHEHF True NCI_RA007_Epitope_Rep4 1159.5298233164701 1159.5287299358602 33.558 2 0.2261190666096636 0.00039635354736424893 0.0005235670845954702 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 56960 15268 LDQTLLDLNEM-[Oxidation] True NCI_RA007_Epitope_Rep1 1319.6278830556698 1319.6273749679299 63.463 1 0.22611438402574366 0.00039635354736424893 0.0005236234393074752 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 70766 13249 LYADVGGKQF True PC9_epitope_Rep2 1096.55530978832 1096.5542099358602 56.238 2 0.22610430129057119 0.00039635354736424893 0.0005237448052874231 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 112454 7429 TLDENPGVRY True H1975_Epitope_Rep3 1162.56185172074 1162.56074993586 33.554 2 0.2260855928997695 0.00039635354736424893 0.0005239700731404687 ['ENSG00000116266|ENST00000370008|STXBP3', 'STXBP3|p.G375Wfs*3|1|0.32|ENSG00000116266|chr1:108796243-108796244|-/T|frameshift_variant'] 134195 9790 VYLPTHTSL True NCI_RA007_Epitope_Rep4 1029.54949613189 1029.54838993586 44.505 2 0.22607866772761448 0.00039635354736424893 0.0005240534838323276 ['ENSG00000007944|ENST00000356840|MYLIP'] 54804 14289 KYPDIISRI True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 62.863 2 0.2260546726090104 0.00039635354736424893 0.0005243425976814758 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 42731 10225 IELAYEQVAKA True H1975_Epitope_Rep2 1233.6605031328497 1233.6594099358601 44.335 2 0.22605405601320308 0.00039635354736424893 0.0005243500290672284 ['ENSG00000213719|ENST00000375784|CLIC1'] 4208 5895 AIAQAESLRYK True NCI_RA007_Epitope_Rep4 1248.6826355597598 1248.68152993586 29.298 2 0.22604237160974922 0.00039635354736424893 0.0005244908727537804 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 134738 9148 VYTSGVYHI True NCI_RA007_Epitope_Rep5 1037.51819600361 1037.5170899358602 41.837 2 0.22604228268731083 0.00039635354736424893 0.0005244919447695129 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 2555 9881 AEQQALRLEV True H1975_Epitope_Rep3 1155.6247863304698 1155.62368993586 43.038 2 0.2260420758702337 0.00039635354736424893 0.0005244944380875185 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 47429 8515 IVLQIDNAR True H1975_Epitope_Rep1 1040.5978433066398 1040.59674993586 37.683 2 0.22603276911012238 0.00039635354736424893 0.0005246066496059646 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 78093 6654 NVYEVVNPK True NCI_RA007_Epitope_Rep3 1060.5553097883198 1060.5542099358602 33.244 2 0.22602716202330295 0.00039635354736424893 0.0005246742658253426 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant', 'CPNE8|p.K277Efs*5|1|0.39|ENSG00000139117|chr12:38724870-38724871|-/T|frameshift_variant'] 35626 13262 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 56.141 2 0.22602388483911603 0.00039635354736424893 0.0005247137896482166 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 135180 5246 WEQQEPGERKL True H1975_Epitope_Rep2 1398.6891774921799 1398.68752490379 25.245 3 0.2260193450501054 0.00039635354736424893 0.0005247685457987145 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 4852 14399 ALELDSNLYR True PC9_epitope_Rep6 1192.60880191316 1192.6077099358602 67.284 2 0.22599779028636807 0.00039635354736424893 0.000525028604377946 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 41518 20768 HYNSDLNNLLF True PC9_epitope_Rep5 1348.6411646706 1348.64006993586 84.935 2 0.22599496616117068 0.00039635354736424893 0.0005250626870741548 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 54401 21395 KYFGGVLEYF True PC9_epitope_Rep2 1221.6070110080097 1221.6059099358602 87.766 2 0.22599280204381736 0.00039635354736424893 0.0005250888060284414 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 118320 17470 TYLVDMQRF True PC9_epitope_Rep6 1171.5695799534699 1171.56848993586 79.821 2 0.22598705179961162 0.00039635354736424893 0.0005251582126492314 ['ENSG00000180340|ENST00000315323|FZD2'] 89422 18626 QYASYEFVQRL True PC9_epitope_Rep4 1402.6881148630198 1402.68700993586 79.722 2 0.2259805636777851 0.00039635354736424893 0.000525236536655639 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54520 20455 KYIENLDNITF True PC9_epitope_Rep1 1368.6925315371197 1368.69142993586 83.491 2 0.22597571213119091 0.00039635354736424893 0.0005252951117357555 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 109779 10387 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.45037496793 44.965 1 0.22597349160343141 0.00039635354736424893 0.0005253219234329884 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 37844 21103 GYLPNQLFRTF True PC9_epitope_Rep2 1354.70337100434 1354.7022699358602 86.631 2 0.2259673598606216 0.00039635354736424893 0.0005253959681123528 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 136766 18176 WYQTKFETL True PC9_epitope_Rep2 1214.5971746002997 1214.5960699358602 75.219 2 0.22596357573027176 0.00039635354736424893 0.0005254416691089181 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 69672 12842 LVDTFLEDVK True H1975_Epitope_Rep1 1177.6230549949698 1177.6219499358601 54.465 2 0.2259482839062001 0.00039635354736424893 0.0005256263893156023 ['CON__P34955'] 100112 14141 SISLYYTGEK True PC9_epitope_Rep3 1159.57610480255 1159.5750099358602 59.479 2 0.22592967773649383 0.00039635354736424893 0.000525851233596665 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 108768 17424 SYSPLLREF True PC9_epitope_Rep6 1110.57095985246 1110.5698699358602 79.637 2 0.22591625502408788 0.00039635354736424893 0.0005260134988549747 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5', 'LAMA5|p.D641Gfs*42|1|0.13|ENSG00000130702|chr20:62337908-62337909|-/C|frameshift_variant'] 87918 9878 QRLAEPSQL True PC9_epitope_Rep1 1040.56145779792 1040.56036993586 42.853 2 0.22590229650046917 0.00039635354736424893 0.000526182294744273 ['ENSG00000173801|ENST00000393931|JUP'] 78472 11425 NYNDRYDEI True PC9_epitope_Rep1 1200.5047307674402 1200.50362993586 48.825 2 0.22590022351774305 0.00039635354736424893 0.0005262073672849329 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000429766.1_1_7:96830042-96830234:-|nuORF', 'ENST00000482859.1_1_4:113709241-113709472:-|nuORF', 'ENST00000541658.2_1_14:35704472-35704841:-|nuORF'] 41464 12382 HYKPTPLYF True PC9_epitope_Rep6 1164.59678067748 1164.59568993586 59.036 2 0.22589451335302577 0.00039635354736424893 0.0005262764374150426 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 97111 4586 [Acetylation]-SDKPDM[Oxidation]AEIEK True H1975_Epitope_Rep3 1319.5914978632497 1319.59038993586 22.761 2 0.22588691402789704 0.00039635354736424893 0.0005263683729304704 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 76492 19127 NQIEDNDDFQL True PC9_epitope_Rep4 1349.57353860325 1349.57244993586 81.665 2 0.22588382294226514 0.00039635354736424893 0.0005264057730388809 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 11806 5818 DHFASVHSV True PC9_epitope_Rep4 997.46174375665 997.46064993586 29.238 2 0.22587759509588123 0.00039635354736424893 0.000526481133992285 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 104320 20958 SQIPFPLSL True PC9_epitope_Rep6 1000.5593325396 1000.55822993586 93.405 2 0.225867491639862 0.00039635354736424893 0.0005266034153444867 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 90235 10207 REEDPYMDTTL True H1975_Epitope_Rep3 1368.5867461392397 1368.5856499358601 44.306 2 0.22581597383209923 0.00039635354736424893 0.0005272273746483284 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 65124 9136 LQNEPLPERL True NCI_RA007_Epitope_Rep3 1207.6560864587498 1207.6549899358602 43.022 2 0.22581110684991615 0.00039635354736424893 0.0005272863595673808 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 138349 11976 YHFEEVQKL True PC9_epitope_Rep2 1191.5924235730297 1191.5913299358601 51.385 2 0.22578772310109815 0.00039635354736424893 0.0005275698489833401 ['ENSG00000140848|ENST00000290776|CPNE2'] 37845 21349 GYLPNQLFRTF True PC9_epitope_Rep3 1354.70337100434 1354.7022699358602 87.416 2 0.2257866307505369 0.00039635354736424893 0.0005275830956715888 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 95669 13656 RYFDPANGKF True PC9_epitope_Rep5 1213.5880068989297 1213.58635490379 57.551 3 0.22577227431826338 0.00039635354736424893 0.0005277572238967285 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 115164 12671 TRDPFSSSL True PC9_epitope_Rep4 1008.48762415132 1008.48652993586 56.584 2 0.22576578426295174 0.00039635354736424893 0.000527835960276022 ['nc|ENSG00000132153|Q7L2E3-3|DHX30', 'ENSG00000132153|ENST00000445061|DHX30', 'nc|ENSG00000132153|Q7L2E3-2|DHX30'] 77349 5625 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 26.636 2 0.22576091734061507 0.00039635354736424893 0.0005278950127819531 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 84766 4908 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 23.17 2 0.2257607910626413 0.00039635354736424893 0.0005278965450562824 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 95161 8394 RVFVVGVGMTK True NCI_RA007_Epitope_Rep5 1191.67979910879 1191.67816490379 38.963 3 0.22575459416178248 0.00039635354736424893 0.0005279717445878136 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 135143 9325 WEIENNPTVKA True H1975_Epitope_Rep3 1299.6459156978701 1299.6448099358602 40.865 2 0.22574348155949825 0.00039635354736424893 0.0005281066231858176 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 141261 5274 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 25.354 2 0.22574223957465847 0.00039635354736424893 0.0005281216998560491 ['ENSG00000125398|ENST00000245479|SOX9'] 23689 20788 EYDNFFQHL True PC9_epitope_Rep3 1211.5247379360299 1211.52364993586 85.232 2 0.22573741802855699 0.00039635354736424893 0.0005281802335362684 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF'] 90940 10047 REYQELMSV True NCI_RA007_Epitope_Rep5 1153.54375912845 1153.5426699358602 45.285 2 0.22572869378123586 0.00039635354736424893 0.000528286162643484 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 107147 7120 SVIDTSTIVRK True NCI_RA007_Epitope_Rep4 1217.69795127073 1217.69629490379 34.007 3 0.22572725836046464 0.00039635354736424893 0.0005283035934486027 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 7204 13415 AQYLINVRL True NCI_RA007_Epitope_Rep4 1088.63422881536 1088.63312993586 58.781 2 0.22570759223494244 0.00039635354736424893 0.0005285424640515316 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 111041 21562 THDELIQLVL True PC9_epitope_Rep5 1179.6499384491499 1179.6488499358602 87.977 2 0.2257019958910811 0.00039635354736424893 0.0005286104587103218 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'ENST00000522774.1_1_8:37720415-37728147:-|nuORF', 'nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1'] 69618 9456 LVDPASHTLY True H1975_Epitope_Rep3 1114.56587447202 1114.56476993586 41.376 2 0.22569361919243563 0.00039635354736424893 0.00052871225062307 ['nc|ENSG00000135622|O95754-2|SEMA4F', 'ENSG00000135622|ENST00000357877|SEMA4F'] 119836 11777 VDDGLISLQVK True H1975_Epitope_Rep3 1185.6605031328502 1185.6594099358601 50.444 2 0.22568188803481948 0.00039635354736424893 0.0005288548382864204 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 25333 10587 FDVSGYPTLK True H1975_Epitope_Rep1 1125.57062549929 1125.5695299358601 45.676 2 0.22567853794098286 0.00039635354736424893 0.0005288955644572269 ['ENSG00000155660|ENST00000652332|PDIA4'] 54412 13887 KYFLKPEVL True PC9_epitope_Rep4 1135.6641319613097 1135.66302993586 61.318 2 0.22565479665175248 0.00039635354736424893 0.0005291842709706797 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 26841 11306 FLDASGAKLDY True H1975_Epitope_Rep3 1198.5870038394198 1198.5859099358602 48.594 2 0.22564361915242284 0.00039635354736424893 0.000529320249957807 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 55816 6679 LAPEYEAAATR True NCI_RA007_Epitope_Rep2 1190.59315184902 1190.5920499358601 30.591 2 0.22563621442561563 0.00039635354736424893 0.0005294103508823247 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 109819 6893 TEEFLDQNKA True H1975_Epitope_Rep3 1193.5564319871298 1193.55532993586 31.473 2 0.22563183883239604 0.00039635354736424893 0.0005294636004569064 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'nc|ENSG00000064961|Q9P0W2-2|HMG20B'] 97175 9530 SDVEAIFSK True H1975_Epitope_Rep1 994.49712620586 994.49602993586 41.58 2 0.22562539649965124 0.00039635354736424893 0.000529542011373337 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 86569 8814 QLDVAGRVM[Oxidation]QY True H1975_Epitope_Rep2 1294.6339714956198 1294.63286993586 38.87 2 0.2256218656005223 0.00039635354736424893 0.0005295849915932463 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 4617 9806 ALAAAGYDVEK True PC9_epitope_Rep5 1106.56078909158 1106.5596899358602 42.686 2 0.2256195201810429 0.00039635354736424893 0.0005296135433791502 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 21 16470 [Acetylation]-AAAAELSLLEK True H1975_Epitope_Rep1 1156.63395434814 1156.6328499358601 68.72 2 0.22561352584798497 0.00039635354736424893 0.0005296865219552475 ['EEF1E1|p.V79Sfs*4|1|0.18|ENSG00000124802|chr6:8097320-8097320|C/-|frameshift_variant', 'nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 79995 17657 PFAKPLPTF True PC9_epitope_Rep2 1016.5695033004799 1016.56840993586 73.199 2 0.2256059795458055 0.00039635354736424893 0.0005297784094727753 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 119848 7500 VDEPQNLIK True H1975_Epitope_Rep1 1054.56587447202 1054.56476993586 33.847 2 0.22556398276399378 0.00039635354736424893 0.0005302900753609765 ['CON__P02769'] 21585 5467 ERQPGAASL True PC9_epitope_Rep5 927.4773938207899 927.47628993586 26.04 2 0.22555746051690947 0.00039635354736424893 0.0005303695833308183 ['ENSG00000180921|ENST00000388913|FAM83H'] 54899 8756 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 39.037 3 0.22555098613345942 0.00039635354736424893 0.0005304485196590212 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 54618 11999 KYLDNPNAL True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 51.016 2 0.2255468252045717 0.00039635354736424893 0.0005304992563405323 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 65961 15457 LSDVFPGVQY True H1975_Epitope_Rep2 1123.5549754351498 1123.5538699358601 64.613 2 0.22554674585590026 0.00039635354736424893 0.0005305002239334014 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 27597 10236 FNPFVTSDR True NCI_RA007_Epitope_Rep5 1081.51925863277 1081.5181699358602 46.004 2 0.2255452649490468 0.00039635354736424893 0.0005305182827196065 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 37530 6744 GVVEVTHDLQK True NCI_RA007_Epitope_Rep2 1223.6510010783097 1223.64934490379 30.846 3 0.22548643211529734 0.00039635354736424893 0.0005312362136492973 ['ENSG00000149257|ENST00000358171|SERPINH1'] 139009 19510 YKVEYPIMY True PC9_epitope_Rep5 1204.58383303528 1204.58272993586 80.098 2 0.22545328108654533 0.00039635354736424893 0.0005316411814920309 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 70768 13990 LYADVGGKQF True PC9_epitope_Rep3 1096.55530978832 1096.5542099358602 58.884 2 0.22544063186733382 0.00039635354736424893 0.0005317957840255092 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 58310 13377 LEMDLKDLEA True NCI_RA007_Epitope_Rep4 1175.57439055039 1175.5732899358602 58.622 2 0.22540919126081466 0.00039635354736424893 0.0005321802559340514 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 136873 7864 YADYSGQQSTY True H1975_Epitope_Rep2 1281.51496109797 1281.5138699358602 35.195 2 0.22540365045711167 0.00039635354736424893 0.000532248040630771 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 106409 3153 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 17.62 3 0.2253962005226602 0.00039635354736424893 0.0005323391947717556 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 137172 9647 YAYDGKDYL True NCI_RA007_Epitope_Rep5 1106.4920408254197 1106.49094993586 43.745 2 0.2253941330637356 0.00039635354736424893 0.0005323644940717004 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 62049 8311 LLDSSQKNLY True H1975_Epitope_Rep2 1179.61355294043 1179.61244993586 36.92 2 0.22538626486454238 0.00039635354736424893 0.0005324607875154925 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 66618 6204 LSKDPNIVIAK True NCI_RA007_Epitope_Rep1 1196.71287305888 1196.71123490379 28.167 3 0.22537021232143642 0.00039635354736424893 0.0005326572976783504 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 15048 4273 DYNVTANSK True NCI_RA007_Epitope_Rep2 1010.4668887067401 1010.46578993586 21.26 2 0.22535879713208948 0.00039635354736424893 0.000532797083089734 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'LDHA|p.G80V|1|0.17|ENSG00000134333|chr11:18399543-18399543|G/T|missense_variant'] 88601 11292 QTDPVTLQY True H1975_Epitope_Rep3 1063.51858992643 1063.51748993586 48.54 2 0.22533817441378992 0.00039635354736424893 0.0005330497131869312 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 139064 10442 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 45.119 2 0.22533534562065335 0.00039635354736424893 0.0005330843755216606 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 92524 18773 RLYPWGVVEV True PC9_epitope_Rep6 1216.6604435631998 1216.65934993586 84.851 2 0.22531447710212993 0.00039635354736424893 0.0005333401557220319 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 87777 19823 QRDFNMIDL True PC9_epitope_Rep5 1150.54409348162 1150.54298993586 81.295 2 0.2253027492762462 0.00039635354736424893 0.0005334839547848616 ['ENSG00000068654|ENST00000263857|POLR1A'] 137473 9850 YEEDAHITFA True H1975_Epitope_Rep3 1194.51931820242 1194.51822993586 42.917 2 0.22529666868341577 0.00039635354736424893 0.0005335585264179576 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 1402 4804 AEEEPNRIPS True H1975_Epitope_Rep2 1140.54111627616 1140.54000993586 23.567 2 0.22528492049585772 0.00039635354736424893 0.0005337026343517466 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 71000 19754 LYIGWDKHYGF True PC9_epitope_Rep2 1397.67682190333 1397.6751749037899 81.371 3 0.22528321933838355 0.00039635354736424893 0.0005337235046613514 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 16660 7658 EEQLQQIRAE True PC9_epitope_Rep6 1242.6204292260197 1242.6193299358602 38.778 2 0.22528082282589112 0.00039635354736424893 0.0005337529071839788 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 38252 5766 HEDVRLYTA True H1975_Epitope_Rep2 1102.54072235334 1102.5396299358601 27.173 2 0.2252617399202464 0.00039635354736424893 0.0005339870910508885 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENST00000590533.1_1_19:2807573-2808419:+|nuORF', 'ENST00000591149.5_1_19:2807001-2808381:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 72284 8733 MIDETRNSLY True H1975_Epitope_Rep2 1240.5757875327201 1240.57468993586 38.553 2 0.22526170389788677 0.00039635354736424893 0.0005339875332118273 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 133931 6566 VYIKHPVSL True NCI_RA007_Epitope_Rep3 1054.61751612206 1054.61640993586 32.879 2 0.22525004873334933 0.00039635354736424893 0.0005341306152693474 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 10087 15215 AYTLLLHTW True NCI_RA007_Epitope_Rep5 1116.59678067748 1116.59568993586 65.209 2 0.2252489602887912 0.00039635354736424893 0.0005341439792826764 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 71306 21063 LYQEIIHYF True PC9_epitope_Rep5 1224.61791004488 1224.6168099358601 86.078 2 0.22523527211701594 0.00039635354736424893 0.0005343120724416642 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 103160 9734 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 47.855 2 0.22522119304491617 0.00039635354736424893 0.000534485021294959 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 72329 4928 M[Oxidation]INTDLSR True NCI_RA007_Epitope_Rep5 964.4647809122 964.46368993586 25.657 2 0.2252062591533214 0.00039635354736424893 0.0005346685322303129 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF', 'ENST00000438116.2_1_22:40983088-40983169:-|nuORF'] 137376 10163 YDSYLGDDYVR True H1975_Epitope_Rep1 1364.5884603913998 1364.5873699358601 44.031 2 0.22520593297236619 0.00039635354736424893 0.0005346725411188073 ['CON__Q29443', 'CON__Q0IIK2'] 134773 19363 VYTTTVHWL True PC9_epitope_Rep3 1118.5760452329 1118.57494993586 79.703 2 0.22520447869863872 0.00039635354736424893 0.0005346904150652202 ['ENSG00000174231|ENST00000304992|PRPF8'] 77614 5936 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49166993586 27.817 2 0.22519874949592855 0.00039635354736424893 0.0005347608364333119 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 135182 5197 WEQQEPGERKL True H1975_Epitope_Rep3 1398.6891774921799 1398.68752490379 25.08 3 0.22519795875274165 0.00039635354736424893 0.000534770556704473 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 22304 10048 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 43.641 2 0.22519642865025177 0.00039635354736424893 0.0005347893661098593 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 134136 19657 VYLDKFIRL True PC9_epitope_Rep2 1165.68593003505 1165.68482993586 80.995 2 0.22519563547611196 0.00039635354736424893 0.0005347991167858708 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 38475 10732 HEQFIPIAA True H1975_Epitope_Rep1 1024.5341804209197 1024.53308993586 46.243 2 0.22518717542387584 0.00039635354736424893 0.0005349031292934333 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 78557 14675 NYQGHFHLF True PC9_epitope_Rep4 1161.5355774032498 1161.5344899358602 64.383 2 0.22518615275631493 0.00039635354736424893 0.0005349157039025066 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 120934 8437 VENYLIQM[Oxidation]AR True H1975_Epitope_Rep1 1251.62815783919 1251.6270699358602 37.379 2 0.22517608485617785 0.00039635354736424893 0.0005350395135408985 ['ENSG00000105185|ENST00000590247|PDCD5', 'nc|ENSG00000105185|O14737-2|PDCD5'] 61348 7361 LISNASDALDK True NCI_RA007_Epitope_Rep2 1145.5928174958499 1145.59172993586 33.257 2 0.22516536364776144 0.00039635354736424893 0.0005351713888253561 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 141889 9133 YVDQAELEKY True H1975_Epitope_Rep2 1256.5924831426798 1256.5913899358602 40.083 2 0.22515494994056237 0.00039635354736424893 0.0005352995129407332 ['ENSG00000112972|ENST00000325110|HMGCS1', 'ENST00000507004.1_1_5:43298575-43313480:-|nuORF', 'ENST00000507293.1_1_5:43298575-43313499:-|nuORF'] 24952 11445 FDAGELITQR True NCI_RA007_Epitope_Rep2 1148.5825871653199 1148.5814899358602 49.11 2 0.22514670885445176 0.00039635354736424893 0.0005354009282209408 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 119838 12211 VDDGLISLQVK True NCI_RA007_Epitope_Rep2 1185.6605031328502 1185.6594099358601 52.097 2 0.225144284231223 0.00039635354736424893 0.0005354307694440187 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 47911 11518 IYIKHPHLF True PC9_epitope_Rep6 1166.66004964038 1166.6584049037901 55.387 3 0.22513030445447568 0.00039635354736424893 0.0005356028590939561 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 108341 20980 SYLDQVKLQF True PC9_epitope_Rep5 1239.64993844915 1239.6488499358602 85.759 2 0.2251194504577738 0.00039635354736424893 0.0005357365089733389 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P162Rfs*4|1|0.1|ENSG00000169375|chr15:75413034-75413035|GG/-|frameshift_variant'] 97691 9056 SEIDMNDIKA True NCI_RA007_Epitope_Rep3 1134.5226893307001 1134.5215899358602 42.713 2 0.22510182109742347 0.00039635354736424893 0.0005359536581024616 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 62474 21136 LLIDELNKL True PC9_epitope_Rep5 1069.63831113629 1069.63720993586 86.359 2 0.2250784774833907 0.00039635354736424893 0.000536241328274264 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 24016 20901 EYMLEKSFYQF True PC9_epitope_Rep2 1483.6693535643901 1483.66824993586 85.841 2 0.22507785784007117 0.00039635354736424893 0.0005362489664301502 ['ENSG00000039123|ENST00000230640|MTREX'] 141302 7257 YTDQFSRNY True H1975_Epitope_Rep3 1192.51490152832 1192.51380993586 32.887 2 0.2250453452885916 0.00039635354736424893 0.0005366498919868344 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 140757 16967 YSDEFGNLDF True H1975_Epitope_Rep2 1205.4876837209702 1205.4865899358601 70.51 2 0.22503966318864801 0.00039635354736424893 0.0005367199911498581 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 10123 9174 AYVHMVTHF True NCI_RA007_Epitope_Rep1 1103.52223583823 1103.52112993586 39.685 2 0.22503831499724367 0.00039635354736424893 0.0005367366249211914 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 119141 9744 VAIEHLDKI True PC9_epitope_Rep6 1036.59169529704 1036.5905899358602 47.902 2 0.225033499231404 0.00039635354736424893 0.000536796045298515 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 70999 20204 LYIGWDKHYGF True PC9_epitope_Rep1 1397.67682190333 1397.6751749037899 82.543 3 0.2250327499827228 0.00039635354736424893 0.0005368052906601031 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 78375 14710 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6069699358602 61.582 2 0.22503026997553324 0.00039635354736424893 0.0005368358938732191 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 116261 11836 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 50.524 2 0.22502220814048643 0.00039635354736424893 0.0005369353887665727 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 16731 5051 EESNYELEGK True NCI_RA007_Epitope_Rep5 1196.5197121252397 1196.51860993586 26.128 2 0.22501440426154434 0.00039635354736424893 0.0005370317177252338 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 87682 19176 QQVQRLPFL True PC9_epitope_Rep2 1127.64512785223 1127.64402993586 79.133 2 0.22501356304173545 0.00039635354736424893 0.000537042102548943 ['ENSG00000132963|ENST00000380842|POMP'] 71698 10779 MEEDSIRLP True H1975_Epitope_Rep2 1088.51721002744 1088.5161099358602 46.492 2 0.22499510675096854 0.00039635354736424893 0.0005372699954045914 ['ENSG00000139083|ENST00000396373|ETV6', 'ENST00000541426.1_1_12:11803061-11978588:+|nuORF', 'ENST00000544715.1_1_12:11869674-11905524:+|nuORF'] 62011 10518 LLDPTQKALY True H1975_Epitope_Rep3 1160.64412479272 1160.64302993586 45.522 2 0.22497953070675603 0.00039635354736424893 0.0005374623993167894 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A', 'ZNF75A|p.E158Sfs*50|1|0.1|ENSG00000162086|chr16:3317446-3317449|AAGA/-|frameshift_variant'] 103159 9499 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 46.793 2 0.2249715638450443 0.00039635354736424893 0.0005375608371197962 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 49064 10164 KEIDAYIVQA True H1975_Epitope_Rep2 1148.607739284 1148.60664993586 44.097 2 0.2249512939937193 0.00039635354736424893 0.0005378113710872923 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 66097 8023 LSEKPTVTTVY True H1975_Epitope_Rep2 1236.6601687796801 1236.65906993586 35.808 2 0.2249366076875793 0.00039635354736424893 0.0005379929660078037 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 63993 5395 LNVTEQEKIDK True NCI_RA007_Epitope_Rep2 1315.69834519355 1315.69669490379 25.604 3 0.22492785681820884 0.00039635354736424893 0.0005381011990082377 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 141307 5107 YTDSEPRATY True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 24.724 2 0.22491476626593135 0.00039635354736424893 0.000538263147107331 ['ENSG00000158480|ENST00000289431|SPATA2'] 87923 9826 QRLAEPSQL True PC9_epitope_Rep5 1040.56145779792 1040.56036993586 42.763 2 0.2249107508401634 0.00039635354736424893 0.0005383128332356353 ['ENSG00000173801|ENST00000393931|JUP'] 43426 8365 IGGIGTVPVGR True H1975_Epitope_Rep1 1024.6029286870798 1024.60182993586 37.104 2 0.22490897686272796 0.00039635354736424893 0.0005383347855665614 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 68088 13106 LTDMTLLHY True H1975_Epitope_Rep2 1105.54778187973 1105.54668993586 55.538 2 0.22490646699932948 0.00039635354736424893 0.0005383658457552274 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'CLIP3|p.G115R|1|0.15|ENSG00000105270|chr19:36027009-36027009|C/T|missense_variant', 'ENST00000491701.1_1_2:29355008-29355161:+|nuORF', 'ENSG00000105270|ENST00000360535|CLIP3'] 63254 12060 LLSNDEVTIK True PC9_epitope_Rep1 1130.6183039677 1130.61720993586 51.247 2 0.22489928566946216 0.00039635354736424893 0.0005384547264450549 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 91531 5914 RIFEPPPPK True NCI_RA007_Epitope_Rep4 1079.61276509479 1079.6116699358602 29.37 2 0.22489703694781357 0.00039635354736424893 0.0005384825610761075 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 138599 5690 YIDQEELNK True NCI_RA007_Epitope_Rep3 1150.5506183307 1150.5495299358602 29.362 2 0.22489285088625183 0.00039635354736424893 0.000538534379906512 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 97922 5591 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 26.507 2 0.22488554501779998 0.00039635354736424893 0.000538624830495348 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 116296 10488 TTDPYLTNSY True H1975_Epitope_Rep1 1173.5189838492502 1173.51847496793 45.298 1 0.22488208537668752 0.00039635354736424893 0.0005386676680346472 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 21446 12663 ERISLQQEL True PC9_epitope_Rep6 1114.59823722946 1114.5971499358602 60.174 2 0.22487474058494608 0.00039635354736424893 0.0005387586231364785 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 103074 5946 SPGLQKEAV True PC9_epitope_Rep5 927.5025459394699 927.50144993586 27.866 2 0.22487135535864555 0.00039635354736424893 0.0005388005496764305 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 61948 14651 LLDLDEELRY True H1975_Epitope_Rep2 1277.6503323719699 1277.6492299358601 61.513 2 0.2248657131333926 0.00039635354736424893 0.0005388704367651165 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'nc|ENSG00000119650|Q96FT9-3|IFT43', 'ENST00000554026.5_1_14:76452129-76542971:+|nuORF', 'nc|ENSG00000119650|Q96FT9-4|IFT43'] 24866 17839 FAYDGKDYL True PC9_epitope_Rep3 1090.4971262058598 1090.4960299358602 73.814 2 0.22486561394037008 0.00039635354736424893 0.0005388716654949609 ['ENSG00000204592|ENST00000376630|HLA-E'] 142503 21238 YYIFIPSKF True PC9_epitope_Rep3 1176.6219327961599 1176.62082993586 86.983 2 0.22485897869196161 0.00039635354736424893 0.0005389538644313487 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 41514 20863 HYNSDLNNLLF True PC9_epitope_Rep1 1348.6411646706 1348.64006993586 85.074 2 0.22485830902615042 0.00039635354736424893 0.0005389621610995718 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 95763 12788 RYIANTVEL True PC9_epitope_Rep4 1077.58185888933 1077.5807699358602 57.052 2 0.22485529294794357 0.00039635354736424893 0.0005389995296846481 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 118072 13700 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.5429699358601 59.383 2 0.22484467461405525 0.00039635354736424893 0.0005391311093322064 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 84650 13090 QDGQFSVLFTK True H1975_Epitope_Rep3 1268.6401020414398 1268.63900993586 55.593 2 0.22483828656990165 0.00039635354736424893 0.0005392102838492183 ['CON__P12763'] 46755 5028 ITESEEVVSR True H1975_Epitope_Rep1 1147.57208205127 1147.57098993586 24.411 2 0.22483290560456226 0.00039635354736424893 0.0005392769855104771 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 70461 15812 LVTYVPVTTF True NCI_RA007_Epitope_Rep3 1138.62741209942 1138.62630993586 69.831 2 0.22482187792783978 0.00039635354736424893 0.0005394137088514397 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 141088 7536 YSQADALKY True H1975_Epitope_Rep1 1057.50802524273 1057.5069299358602 33.981 2 0.22480984435452514 0.00039635354736424893 0.0005395629431820797 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000586714.1_1_17:40854552-40854989:-|nuORF', 'ENST00000492143.5_1_7:148504740-148513906:-|nuORF', 'ENSG00000106462|ENST00000320356|EZH2', 'ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 61027 5990 LIEVDDER True NCI_RA007_Epitope_Rep3 987.4872897981498 987.48618993586 30.541 2 0.22480819088398538 0.00039635354736424893 0.0005395834519297864 ['ENSG00000137154|ENST00000380394|RPS6'] 62709 19006 LLLNNDNLLR True PC9_epitope_Rep3 1196.6877209401998 1196.68662993586 78.328 2 0.22480583849565527 0.00039635354736424893 0.0005396126310208897 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 118250 14292 TYLEKAIKI True PC9_epitope_Rep5 1077.6433965167298 1077.6422899358602 59.977 2 0.22479934457394005 0.00039635354736424893 0.0005396931900267045 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 49433 7341 KEYAVNEVVA True H1975_Epitope_Rep2 1120.57643915572 1120.57534993586 33.178 2 0.22478570055619712 0.00039635354736424893 0.0005398624873855474 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 90781 6226 RESEGFEEHVP True H1975_Epitope_Rep3 1314.5840437173 1314.5824049037901 28.961 3 0.22477967939269533 0.00039635354736424893 0.0005399372159803122 ['ENSG00000119801|ENST00000261353|YPEL5'] 112545 12750 TLEEDEEELFK True H1975_Epitope_Rep1 1380.6296564970396 1380.62854993586 54.103 2 0.22477906399119263 0.00039635354736424893 0.0005399448543062302 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 77529 7995 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.5822099358602 35.723 2 0.22477817190260566 0.00039635354736424893 0.0005399559270478542 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 1052 5526 AEAESM[Oxidation]YQIK True NCI_RA007_Epitope_Rep2 1184.53833977528 1184.53724993586 26.11 2 0.22476377549811624 0.00039635354736424893 0.0005401346489568835 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 118176 19264 TYISWKEEL True PC9_epitope_Rep1 1167.58119018299 1167.58008993586 78.901 2 0.22475661533414662 0.00039635354736424893 0.0005402235597906592 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 142229 12047 YWMHVQNTF True NCI_RA007_Epitope_Rep3 1224.53861417836 1224.53750993586 54.509 2 0.2247480794360281 0.00039635354736424893 0.0005403295728942909 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 140820 4828 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 23.661 2 0.2247446874423577 0.00039635354736424893 0.0005403717061576117 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 90938 9772 REYQELMSV True NCI_RA007_Epitope_Rep3 1153.54375912845 1153.5426699358602 45.504 2 0.22474395647556097 0.00039635354736424893 0.000540380786210194 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 115174 6137 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 29.0 3 0.22474202728939868 0.00039635354736424893 0.000540404751251093 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 118069 13637 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 59.676 2 0.22473543902696616 0.00039635354736424893 0.0005404866010440482 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 88602 11298 QTDPVTLQY True H1975_Epitope_Rep3 1063.51858992643 1063.51807496793 48.563 1 0.2247330304755199 0.00039635354736424893 0.0005405165269757751 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 118249 12482 TYLEKAIKI True PC9_epitope_Rep4 1077.6433965167298 1077.6422899358602 55.818 2 0.22473281123506106 0.00039635354736424893 0.0005405192510918992 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 48853 7468 KEAEPIPETV True H1975_Epitope_Rep3 1111.57610480255 1111.5750099358602 33.704 2 0.22472884480101374 0.00039635354736424893 0.0005405685373804312 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6'] 86576 17640 QLEDELVSLQK True PC9_epitope_Rep5 1300.6874461566802 1300.68634993586 72.864 2 0.22472458373032553 0.00039635354736424893 0.0005406214898016587 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 61997 9548 LLDPSQKNLY True H1975_Epitope_Rep1 1189.63428838501 1189.6331899358602 41.651 2 0.22472197807204775 0.00039635354736424893 0.0005406538729398934 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 23754 20877 EYGKFFVTL True PC9_epitope_Rep5 1102.5698972233 1102.5688099358601 85.356 2 0.22471484592107002 0.00039635354736424893 0.0005407425213137406 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 35696 10655 GTFATLSELH True NCI_RA007_Epitope_Rep3 1074.53457434374 1074.53346993586 48.96 2 0.22470580251096792 0.00039635354736424893 0.0005408549464659317 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 39124 14795 HHYEGAVVIL True PC9_epitope_Rep5 1136.5978433066398 1136.5961849037901 61.909 3 0.22470367726220797 0.00039635354736424893 0.0005408813703688809 ['ENSG00000163655|ENST00000496455|GMPS'] 68386 8059 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 35.973 2 0.22469249051116685 0.00039635354736424893 0.0005410204802051555 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 137523 6265 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 29.109 2 0.22468918644148542 0.00039635354736424893 0.0005410615739422627 ['ENSG00000127184|ENST00000247655|COX7C'] 30128 19005 FYMDTSHLF True PC9_epitope_Rep6 1159.5008316873098 1159.4997299358602 85.746 2 0.2246879341301326 0.00039635354736424893 0.0005410771501445253 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 95995 21297 RYLMDPDTFTF True PC9_epitope_Rep2 1404.6383877892797 1404.63728993586 87.382 2 0.22467750719623 0.00039635354736424893 0.0005412068574315402 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 125990 13474 VLDPYLLKY True H1975_Epitope_Rep3 1122.63249747986 1122.6314099358601 57.101 2 0.2246674784899729 0.00039635354736424893 0.000541331640343194 ['ENSG00000239789|ENST00000285298|MRPS17'] 30051 17357 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6166049037902 72.017 3 0.2246507572817153 0.00039635354736424893 0.0005415397593933521 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 71069 15905 LYLDEAHSI True PC9_epitope_Rep1 1059.52367530687 1059.52256993586 65.989 2 0.22462775831550677 0.00039635354736424893 0.0005418261451602337 ['ENSG00000100596|ENST00000216484|SPTLC2'] 17356 21601 EHDDFFISL True PC9_epitope_Rep3 1121.50293986229 1121.50184993586 88.383 2 0.22462391571708895 0.00039635354736424893 0.0005418740084496517 ['ENSG00000125676|ENST00000245838|THOC2'] 132579 14726 VVEQLKDWLY True H1975_Epitope_Rep3 1291.68123857743 1291.68014993586 62.018 2 0.22460175541891164 0.00039635354736424893 0.0005421501192402693 ['ENSG00000164109|ENST00000296509|MAD2L1'] 28076 7262 FQTEIQTVNK True NCI_RA007_Epitope_Rep1 1206.6244519772997 1206.62334993586 32.238 2 0.22459693615695164 0.00039635354736424893 0.0005422101845102196 ['ENSG00000115866|ENST00000264161|DARS1', 'nc|ENSG00000115866|P14868-2|DARS1'] 6757 17150 AQDEHLITF True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 70.989 2 0.224576545002692 0.00039635354736424893 0.0005424644052493419 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 54900 8848 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 39.386 3 0.22457019480023768 0.00039635354736424893 0.0005425435989552141 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 104264 17253 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 74.371 2 0.22456987957674618 0.00039635354736424893 0.0005425475304259978 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 119136 12112 VAIEHLDKI True PC9_epitope_Rep3 1036.59169529704 1036.5905899358602 51.633 2 0.22456149950987914 0.00039635354736424893 0.0005426520571915161 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 69900 11904 LVILEGELER True H1975_Epitope_Rep1 1169.6655885132898 1169.66448993586 50.79 2 0.22455318303939636 0.00039635354736424893 0.0005427558106784382 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 24598 22658 FAIDPHLLLSV True PC9_epitope_Rep5 1223.69140933831 1223.6903099358601 92.155 2 0.22454824899587353 0.00039635354736424893 0.0005428173755518058 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 69843 6853 LVHELDEAEYR True H1975_Epitope_Rep1 1372.6622940379998 1372.6606349037902 31.404 3 0.22454706391577195 0.00039635354736424893 0.0005428321635152185 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1'] 54367 11481 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.53333490379 49.481 3 0.22454628796476592 0.00039635354736424893 0.0005428418464004329 ['ENSG00000123975|ENST00000314355|CKS2'] 28611 8661 FSHEEIAM[Oxidation]ATV True NCI_RA007_Epitope_Rep2 1249.5648888762898 1249.56378993586 38.336 2 0.22452938921138688 0.00039635354736424893 0.0005430527644156938 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 95972 12170 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64474993586 52.123 2 0.2244966773505753 0.00039635354736424893 0.0005434612838636553 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 140891 5467 YSEEECRQY True H1975_Epitope_Rep2 1205.46590273057 1205.46480993586 26.055 2 0.22449268680199952 0.00039635354736424893 0.0005435111406062007 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 90472 6926 RELAQQVQQVA True NCI_RA007_Epitope_Rep5 1268.68369818892 1268.68260993586 33.327 2 0.224492566210407 0.00039635354736424893 0.0005435126473135936 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 92726 6563 RNVSTGDVNVE True PC9_epitope_Rep3 1188.5734790335998 1188.5723899358602 30.269 2 0.22448785586353154 0.00039635354736424893 0.0005435715030739041 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 75182 19694 NIANHFFTV True PC9_epitope_Rep1 1061.52942939365 1061.52832993586 80.578 2 0.22448739701242532 0.00039635354736424893 0.0005435772367579387 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 54517 13495 KYIENLDNITF True NCI_RA007_Epitope_Rep3 1368.6925315371197 1368.69142993586 60.374 2 0.22448012944432902 0.00039635354736424893 0.000543668058490222 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 139193 12044 YLEQLHQLY True H1975_Epitope_Rep3 1205.60807363717 1205.6069699358602 51.488 2 0.2244751475963868 0.00039635354736424893 0.000543730324708441 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 43013 7194 IETIEVM[Oxidation]EDR True H1975_Epitope_Rep1 1249.58601824369 1249.5849299358601 32.691 2 0.22447047151269664 0.00039635354736424893 0.0005437887758056931 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 106384 8500 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.5913299358601 40.508 2 0.22446117738507185 0.00039635354736424893 0.0005439049712215034 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 138302 7347 YHDEADQSAL True PC9_epitope_Rep5 1147.47818166643 1147.47708993586 33.219 2 0.2244558370420594 0.00039635354736424893 0.0005439717475921319 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 87933 20300 QRLETILSL True PC9_epitope_Rep3 1071.62880908175 1071.6277099358601 83.333 2 0.22445150116187015 0.00039635354736424893 0.000544025970074235 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 1471 11098 AEEIAGKWLQA True H1975_Epitope_Rep1 1214.62953735774 1214.62844993586 47.653 2 0.2244513772790991 0.00039635354736424893 0.0005440275193736914 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 89561 19439 QYMERLQLL True PC9_epitope_Rep2 1192.62742918276 1192.6263299358602 80.151 2 0.22445126258273093 0.00039635354736424893 0.0005440289537903446 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 28364 12179 FRVKYETEL True PC9_epitope_Rep2 1183.62372370131 1183.62262993586 52.158 2 0.22443908124273945 0.00039635354736424893 0.0005441813177682927 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 14344 2634 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 14.782 2 0.224437052842727 0.00039635354736424893 0.000544206693116473 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 90586 8459 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 37.522 2 0.2244363688985172 0.00039635354736424893 0.0005442152495477646 ['ENSG00000026025|ENST00000544301|VIM'] 49514 19410 KFIDPIYQVW True PC9_epitope_Rep6 1307.69140933831 1307.6903099358601 87.317 2 0.22442784801943838 0.00039635354736424893 0.0005443218606651168 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 78287 19173 NYIKDLNIL True PC9_epitope_Rep4 1104.61791004488 1104.6168099358601 81.846 2 0.2244042939519322 0.00039635354736424893 0.0005446166723272912 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 74304 11206 NELESYAYSLK True H1975_Epitope_Rep1 1315.62959692739 1315.6284899358602 48.074 2 0.22439278343379218 0.00039635354736424893 0.0005447608006171938 ['ENSG00000044574|ENST00000324460|HSPA5'] 18371 12564 EITALAPSTMK True PC9_epitope_Rep1 1160.61111041228 1160.61000993586 53.196 2 0.2243753947704248 0.00039635354736424893 0.0005449786043420803 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 133704 17076 VYAVIPAEKF True PC9_epitope_Rep4 1135.62774645259 1135.62664993586 73.679 2 0.2243708190001925 0.00039635354736424893 0.0005450359332036275 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 47737 19768 IYDSVKVYF True PC9_epitope_Rep5 1132.5804619069997 1132.57936993586 81.082 2 0.22437013059338418 0.00039635354736424893 0.0005450445586311665 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 133690 19581 VYAQVARLF True PC9_epitope_Rep5 1065.5971150306498 1065.5960099358601 80.37 2 0.22436769224060624 0.00039635354736424893 0.000545075111195953 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 48854 5116 KEAESSPFVER True NCI_RA007_Epitope_Rep1 1277.62518025329 1277.62354490379 23.984 3 0.22435269370554783 0.00039635354736424893 0.0005452630806638283 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 19430 9025 ELNEALELK True H1975_Epitope_Rep1 1057.5655401188499 1057.56444993586 39.621 2 0.22435032819161546 0.00039635354736424893 0.0005452927324558584 ['ENSG00000141510|ENST00000269305|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-7|TP53'] 104252 11740 SQIDPSSIERA True PC9_epitope_Rep3 1201.5938801250102 1201.59278993586 50.176 2 0.22432558234554692 0.00039635354736424893 0.0005456030194237377 ['ENSG00000100393|ENST00000263253|EP300'] 140862 9107 YSDVGRYIDHY True H1975_Epitope_Rep2 1386.62042922602 1386.61879490379 39.982 3 0.22431475460773262 0.00039635354736424893 0.0005457388436142926 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 78679 11939 NYYEQWGK True PC9_epitope_Rep5 1086.47705946762 1086.4759699358601 50.92 2 0.22431451741373465 0.00039635354736424893 0.0005457418193784438 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 86560 8284 QLDSPQRALY True H1975_Epitope_Rep2 1189.6091362663299 1189.60802993586 36.815 2 0.2243073828778574 0.00039635354736424893 0.0005458313347173809 ['ENST00000476678.1_1_22:20754858-20755110:+|nuORF', 'nc|ENSG00000185252|Q16587-3|ZNF74', 'ENSG00000185252|ENST00000400451|ZNF74', 'ENST00000403682.7_1_22:20748811-20761255:+|nuORF'] 99441 11992 SIAIDTIINQK True NCI_RA007_Epitope_Rep2 1214.6870522338602 1214.6859499358602 51.238 2 0.2242873796475022 0.00039635354736424893 0.0005460823890923709 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 4876 6586 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep5 1219.5754535599897 1219.57434993586 30.304 2 0.22427091737659957 0.00039635354736424893 0.0005462890888842049 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 8096 10593 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.45562993586 45.768 2 0.22425867923134366 0.00039635354736424893 0.0005464428015465296 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 54524 20383 KYIENLDNITF True PC9_epitope_Rep5 1368.6925315371197 1368.69142993586 83.438 2 0.22424213628317174 0.00039635354736424893 0.0005466506520605375 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 62468 15959 LLIDDKGTIKL True PC9_epitope_Rep6 1227.74383883399 1227.74218490379 73.684 3 0.22421099361024782 0.00039635354736424893 0.0005470421531014311 ['ENSG00000170312|ENST00000395284|CDK1'] 142693 10876 YYPTEDVPR True PC9_epitope_Rep3 1138.5294889632999 1138.52838993586 46.814 2 0.22420481905038978 0.00039635354736424893 0.0005471198081933959 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 322 19366 AAIDWFDGK True PC9_epitope_Rep3 1021.4868958753299 1021.48578993586 79.715 2 0.22420385568411053 0.00039635354736424893 0.0005471319250822506 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 74488 8839 NFEDVAFDEKK True NCI_RA007_Epitope_Rep1 1340.6248459001197 1340.62321490379 38.381 3 0.22419704142888164 0.00039635354736424893 0.000547217640122801 ['ENSG00000185624|ENST00000331483|P4HB'] 97564 5513 SEETLDEGPPK True NCI_RA007_Epitope_Rep2 1200.55101225352 1200.5499099358601 26.059 2 0.22419702116013912 0.00039635354736424893 0.0005472178950990192 ['ENSG00000100442|ENST00000396062|FKBP3'] 45673 17324 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6749899358601 71.451 2 0.22419042055903 0.00039635354736424893 0.0005473009355155952 ['ENSG00000136628|ENST00000366923|EPRS1'] 71293 15813 LYQDHMQYI True PC9_epitope_Rep1 1209.54884450889 1209.54774993586 65.638 2 0.22418705239174427 0.00039635354736424893 0.0005473433144091186 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 110937 16773 THAAEDIVYTL True PC9_epitope_Rep4 1231.6084675599898 1231.60736993586 72.484 2 0.22418424549293145 0.00039635354736424893 0.0005473786338357928 ['ENSG00000075420|ENST00000415807|FNDC3B'] 71836 19005 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep1 1146.62061316356 1146.6195099358602 79.232 2 0.2241776874138356 0.00039635354736424893 0.000547461163569592 ['ENSG00000108424|ENST00000290158|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant'] 89558 20392 QYMELFNKI True PC9_epitope_Rep3 1184.5899810448798 1184.5888899358602 83.688 2 0.22417522988448382 0.00039635354736424893 0.0005474920934088233 ['ENSG00000124641|ENST00000265350|MED20'] 14829 11700 DVTGAEALLER True H1975_Epitope_Rep1 1172.60371653272 1172.60260993586 49.995 2 0.22417095675785662 0.00039635354736424893 0.0005475458780682331 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 45952 10144 ISEQFTAM[Oxidation]FR True H1975_Epitope_Rep3 1244.58595867404 1244.58486993586 44.063 2 0.22416553572734488 0.00039635354736424893 0.0005476141187042634 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 27815 18814 FQDDRYLYM True PC9_epitope_Rep5 1249.54375912845 1249.5426699358602 77.381 2 0.22415878119308116 0.00039635354736424893 0.0005476991575987919 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ROCK1|p.G236Lfs*5|1|0.06|ENSG00000067900|chr18:21042679-21042680|-/TCAA|frameshift_variant', 'ROCK1|p.G236Dfs*12|1|0.06|ENSG00000067900|chr18:21042678-21042679|-/AT|frameshift_variant', 'ROCK1|p.V266Yfs*8|1|0.19|ENSG00000067900|chr18:21042589-21042589|C/-|frameshift_variant', 'ENSG00000134318|ENST00000315872|ROCK2'] 24460 11815 FADQEVRSL True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 50.777 2 0.22414626745667432 0.00039635354736424893 0.0005478567392719609 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 17796 17826 EHSLVIDTL True PC9_epitope_Rep3 1025.53932537101 1025.53822993586 73.765 2 0.2241244899542179 0.00039635354736424893 0.0005481310852073555 ['ENSG00000143256|ENST00000368010|PFDN2'] 126118 7549 VLETAEDIQER True NCI_RA007_Epitope_Rep1 1301.6463096206896 1301.64520993586 33.358 2 0.22412411076963015 0.00039635354736424893 0.0005481358632729224 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 53812 12106 KTEDPDLPAFY True H1975_Epitope_Rep1 1294.6081332068197 1294.60702993586 51.579 2 0.22411858102883667 0.00039635354736424893 0.0005482055477103573 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 54972 7582 KYQEVTNNL True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 36.544 2 0.2240871315028655 0.00039635354736424893 0.0005486020359881972 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 141902 10443 YVEDPQGNTIY True H1975_Epitope_Rep2 1297.58264673497 1297.58154993586 45.185 2 0.22408395270052744 0.00039635354736424893 0.0005486421275710108 ['ENSG00000166557|ENST00000299705|TMED3', 'nc|ENSG00000166557|Q9Y3Q3-2|TMED3'] 28548 13574 FSEQGINEFLR True NCI_RA007_Epitope_Rep1 1338.6568147347398 1338.6557099358602 56.809 2 0.22406158621408054 0.00039635354736424893 0.0005489243005325789 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 137179 14350 YAYDGKDYL True PC9_epitope_Rep5 1106.4920408254197 1106.49094993586 60.198 2 0.2240548812040032 0.00039635354736424893 0.000549008918515609 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 137173 14441 YAYDGKDYL True PC9_epitope_Rep1 1106.4920408254197 1106.49094993586 60.371 2 0.22404415745275066 0.00039635354736424893 0.0005491442806709299 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 78413 18970 NYLPQISHL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 77.751 2 0.22403796897624736 0.00039635354736424893 0.0005492224108792275 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 11691 7120 DGVVEITGK True NCI_RA007_Epitope_Rep2 916.48656152216 916.48601496793 32.316 1 0.2240283880041929 0.00039635354736424893 0.0005493433937243094 ['ENSG00000106211|ENST00000248553|HSPB1'] 46027 9804 ISGLIYEETR True NCI_RA007_Epitope_Rep2 1179.6135529404298 1179.61244993586 42.76 2 0.22402740380341607 0.00039635354736424893 0.0005493558231436316 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 110119 5724 TEMNGRIVAT True H1975_Epitope_Rep3 1090.5440934816197 1090.54298993586 27.046 2 0.2240066986213692 0.00039635354736424893 0.0005496173732062001 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 13099 11157 DLQM[Oxidation]VNISLR True H1975_Epitope_Rep3 1203.62815783919 1203.6270699358602 48.01 2 0.22399816427532765 0.00039635354736424893 0.0005497252163327904 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2'] 74115 13062 NDYIFSFDK True H1975_Epitope_Rep3 1147.51858992643 1147.51748993586 55.484 2 0.22399042253940546 0.00039635354736424893 0.0005498230621120935 ['ENSG00000113643|ENST00000231572|RARS1', 'nc|ENSG00000113643|P54136-2|RARS1'] 96040 21896 RYLPTGSFPFL True PC9_epitope_Rep1 1296.6866583110398 1296.68556993586 89.036 2 0.2239683665919821 0.00039635354736424893 0.0005501019172894091 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 141090 7679 YSQADALKY True H1975_Epitope_Rep3 1057.50802524273 1057.5069299358602 34.52 2 0.22396071814160856 0.00039635354736424893 0.0005501986504155039 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000586714.1_1_17:40854552-40854989:-|nuORF', 'ENST00000492143.5_1_7:148504740-148513906:-|nuORF', 'ENSG00000106462|ENST00000320356|EZH2', 'ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 142734 15450 YYQHIVTTL True PC9_epitope_Rep1 1136.5866099166 1136.58550993586 64.249 2 0.2239525763073647 0.00039635354736424893 0.0005503016423261198 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 42681 6745 IEIIANDQGNR True NCI_RA007_Epitope_Rep2 1241.63641364333 1241.63530993586 30.85 2 0.2239486717603597 0.00039635354736424893 0.0005503510406086619 ['HSPA8|p.V26I|1|0.12|ENSG00000109971|chr11:123061249-123061249|C/T|missense_variant'] 12687 12499 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 53.118 2 0.22393328657776448 0.00039635354736424893 0.0005505457291842217 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 102743 21085 SMVEDITGLRL True PC9_epitope_Rep2 1232.6434731697198 1232.6423699358602 86.56 2 0.22393246180992896 0.00039635354736424893 0.0005505561679875881 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 48395 9521 IYTSSVNRL True PC9_epitope_Rep2 1051.56620882519 1051.5651099358602 41.971 2 0.22393163719955408 0.00039635354736424893 0.0005505666049965607 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 108083 20804 SYANYFIRL True PC9_epitope_Rep1 1145.58694426977 1145.58584993586 84.848 2 0.22391792082759002 0.00039635354736424893 0.0005507402408273229 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 98025 9014 SEQFTAM[Oxidation]FR True NCI_RA007_Epitope_Rep1 1131.5018946969099 1131.5007899358602 39.064 2 0.22391780359809182 0.00039635354736424893 0.0005507417250746927 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 117336 9178 TVNVVQFEPSK True H1975_Epitope_Rep1 1246.65575210558 1246.65464993586 40.21 2 0.22391470616386747 0.00039635354736424893 0.0005507809432673733 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 20949 15580 EQPETYYKW True PC9_epitope_Rep1 1242.5557037111398 1242.55460993586 64.75 2 0.22390129473778062 0.00039635354736424893 0.0005509507845000782 ['ENSG00000164880|ENST00000404767|INTS1'] 119140 11949 VAIEHLDKI True PC9_epitope_Rep5 1036.59169529704 1036.5905899358602 50.959 2 0.22389649982903093 0.00039635354736424893 0.0005510115195940966 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 12413 8803 DITSDTSGDFR True NCI_RA007_Epitope_Rep1 1212.5258601348398 1212.5247699358601 38.243 2 0.22389607900796626 0.00039635354736424893 0.0005510168502783115 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 84247 18067 PYNDYFEYF True NCI_RA007_Epitope_Rep4 1256.50260550912 1256.5015099358602 78.182 2 0.22389413793432117 0.00039635354736424893 0.0005510414391912002 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 112634 22006 TLFEDSFQQI True PC9_epitope_Rep1 1226.58191845898 1226.58082993586 89.469 2 0.2238889280722633 0.00039635354736424893 0.0005511074415348698 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'nc|ENSG00000289720|Q96J02-3|ITCH', 'POFUT1-ITCH|1|fusion', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'ENSG00000123124|ENST00000517970|WWP1', 'nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF'] 7483 9143 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41890993586 40.12 2 0.22386136373435742 0.00039635354736424893 0.0005514567787561313 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 14455 8762 DTENQTLNY True H1975_Epitope_Rep2 1096.46728262956 1096.46618993586 38.666 2 0.22383488993151276 0.00039635354736424893 0.0005517925042241912 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217'] 73386 8245 MTEVLPNQRY True H1975_Epitope_Rep1 1249.6125073946098 1249.6114099358601 36.656 2 0.2238131614808226 0.00039635354736424893 0.0005520682051018361 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'SLC35E4-SEC14L2|2|fusion', 'SLC35E4-SEC14L2|3|fusion', 'SLC35E4-SEC14L2|1|fusion', 'ENST00000454552.5_3_22:30812232-30824714:+|nuORF'] 53683 8449 KSDVHLNFY True H1975_Epitope_Rep2 1121.55055876105 1121.54946993586 37.452 2 0.2237997604283182 0.00039635354736424893 0.0005522383129098657 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 98308 9236 SEVQYIQEA True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 40.482 2 0.22378524680487388 0.00039635354736424893 0.0005524226025868197 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 96227 15041 RYQDAIRVF True PC9_epitope_Rep1 1166.6196413803798 1166.61799490379 62.674 3 0.2237730504636958 0.00039635354736424893 0.0005525775158154801 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 99178 5725 SHITPSTQQHL True PC9_epitope_Rep5 1247.62584895963 1247.62420490379 27.014 3 0.2237651280660214 0.00039635354736424893 0.0005526781664109151 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 92590 5160 RMQKEITAL True NCI_RA007_Epitope_Rep5 1088.60121443492 1088.60010993586 26.543 2 0.2237514444549519 0.00039635354736424893 0.0005528520540264872 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 83315 16802 PTDYADIMMGY True H1975_Epitope_Rep3 1275.51516142211 1275.51406993586 70.181 2 0.22374852962318556 0.00039635354736424893 0.0005528891020087908 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 41264 9067 HVLVTLGEK True PC9_epitope_Rep3 994.58113061334 994.58002993586 39.818 2 0.22373671732952324 0.00039635354736424893 0.0005530392636713577 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 112488 4888 TLDNAYM[Oxidation]EK True NCI_RA007_Epitope_Rep2 1099.4855759264299 1099.48446993586 23.635 2 0.22373062140786756 0.00039635354736424893 0.0005531167729878122 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 53809 9117 KTDSDSDLQLY True H1975_Epitope_Rep3 1283.58812603823 1283.58702993586 40.057 2 0.22369613797534654 0.00039635354736424893 0.0005535554332399826 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 29738 20875 FVNDIFERI True PC9_epitope_Rep5 1151.59750895347 1151.59640993586 85.348 2 0.22369152364900743 0.00039635354736424893 0.0005536141580907338 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 25218 15607 FDEISFVNFAR True H1975_Epitope_Rep1 1343.65100107831 1343.64990993586 65.316 2 0.22368420867357588 0.00039635354736424893 0.00055370726592812 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 130173 11263 VSEEIEDIIK True H1975_Epitope_Rep3 1173.6128842340897 1173.61178993586 48.426 2 0.22367475515583865 0.00039635354736424893 0.0005538276172324562 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 95796 22733 RYILEPFFI True PC9_epitope_Rep3 1196.65938093404 1196.65828993586 92.708 2 0.22367098355362708 0.00039635354736424893 0.0005538756402539205 ['ENSG00000151012|ENST00000280612|SLC7A11'] 17967 9170 EIDGGLETLR True H1975_Epitope_Rep1 1101.56660274801 1101.56550993586 40.177 2 0.22367026346766272 0.00039635354736424893 0.000553884809432752 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB', 'ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 11701 7413 DGYNYTLSK True H1975_Epitope_Rep3 1059.48728979815 1059.48618993586 33.491 2 0.2236674654918526 0.00039635354736424893 0.0005539204387642661 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 107652 10054 SVQGIILYR True NCI_RA007_Epitope_Rep5 1047.6076797143498 1047.60658993586 45.311 2 0.22366522788468332 0.00039635354736424893 0.0005539489340348769 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 80183 20136 PFVDHVFTF True PC9_epitope_Rep4 1107.53893144819 1107.5378299358601 85.588 2 0.22366062527701952 0.00039635354736424893 0.0005540075515168618 ['ENSG00000113460|ENST00000336767|BRIX1'] 124660 20401 VGYDKDFLTI True PC9_epitope_Rep1 1169.5968402471299 1169.59574993586 83.285 2 0.22365517346600605 0.00039635354736424893 0.000554076992259341 ['ENSG00000123066|ENST00000281928|MED13L'] 120543 12677 VEFTRSLFVN True NCI_RA007_Epitope_Rep4 1210.6346227381798 1210.63352993586 55.802 2 0.22364932718605304 0.00039635354736424893 0.0005541514671306186 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 72687 5945 MMDPNSTQRY True H1975_Epitope_Rep2 1241.51689275761 1241.51578993586 27.849 2 0.2236434734507968 0.00039635354736424893 0.0005542260470369268 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 133789 16417 VYEYVVERF True PC9_epitope_Rep6 1202.5971746002995 1202.5960699358602 75.552 2 0.2236315523219986 0.00039635354736424893 0.0005543779601168673 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 85872 17773 QHFDSVMQL True PC9_epitope_Rep5 1103.5069796969099 1103.50588993586 73.383 2 0.2236046707938784 0.00039635354736424893 0.0005547206695852649 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 30894 9084 GAPTFNVTVTK True NCI_RA007_Epitope_Rep2 1133.6080736371698 1133.6069699358602 39.94 2 0.2235936328555936 0.00039635354736424893 0.0005548614525277973 ['ENSG00000108518|ENST00000225655|PFN1'] 90549 7502 REMDYETEV True H1975_Epitope_Rep2 1170.48630382198 1170.4852099358602 33.807 2 0.22359110762497178 0.00039635354736424893 0.000554893665519332 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 26320 19494 FHNELLTQL True PC9_epitope_Rep5 1113.5818588893299 1113.5807699358602 80.036 2 0.2235818158585282 0.00039635354736424893 0.0005550122116782102 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 103109 16343 SPHGLVMVGV True PC9_epitope_Rep5 994.5269868654999 994.52588993586 67.86 2 0.22357110507868913 0.00039635354736424893 0.0005551488934135685 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 62323 17088 LLGELLQDNAK True PC9_epitope_Rep2 1212.67140216972 1212.6703099358601 70.979 2 0.22355968590542397 0.00039635354736424893 0.0005552946522524854 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 17791 17771 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 73.152 2 0.22355945972016347 0.00039635354736424893 0.0005552975397582945 ['ENSG00000143256|ENST00000368010|PFDN2'] 8808 10648 AVDSLVPIGR True NCI_RA007_Epitope_Rep2 1025.58694426977 1025.58584993586 46.018 2 0.22354119701133168 0.00039635354736424893 0.0005555307332217778 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 2387 4457 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55606993586 22.266 2 0.22353702941343065 0.00039635354736424893 0.000555583962347824 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 9840 15446 AYLEAYKEF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 71.569 2 0.22353087279709938 0.00039635354736424893 0.0005556626048508821 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 139161 6554 YLDYHM[Oxidation]EKY True H1975_Epitope_Rep2 1276.5434251557201 1276.5423299358602 30.121 2 0.22352017032134444 0.00039635354736424893 0.0005557993411862536 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 109865 10633 TEEQPMEVSV True H1975_Epitope_Rep2 1147.50670491339 1147.50560993586 45.923 2 0.22351385969573273 0.00039635354736424893 0.000555879982448157 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-5|NCAPH2'] 53982 3689 KVAPAPAVVK True NCI_RA007_Epitope_Rep4 978.6226015024998 978.62150993586 20.302 2 0.22351338635092152 0.00039635354736424893 0.0005558860316280498 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF'] 11686 15663 DGTGVVEFVR True PC9_epitope_Rep5 1077.5454733806098 1077.54436993586 65.259 2 0.22350782757463594 0.00039635354736424893 0.0005559570757726772 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 70770 12592 LYADVGGKQF True PC9_epitope_Rep4 1096.55530978832 1096.5542099358602 56.264 2 0.22350723009764345 0.00039635354736424893 0.0005559647123915332 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 72495 7671 M[Oxidation]LDSHEELY True H1975_Epitope_Rep2 1151.48049054599 1151.4793899358601 34.458 2 0.2234932580361782 0.00039635354736424893 0.0005561433255275754 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 25335 11076 FDVSGYPTLK True H1975_Epitope_Rep1 1125.57062549929 1125.5695299358601 47.567 2 0.2234929079728448 0.00039635354736424893 0.000556147801333721 ['ENSG00000155660|ENST00000652332|PDIA4'] 97350 7227 SEDEKQQYLP True H1975_Epitope_Rep2 1235.56699667083 1235.56588993586 32.732 2 0.2234865365087727 0.00039635354736424893 0.0005562292713026317 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 40971 4529 HTDILKEKY True H1975_Epitope_Rep3 1145.60807363717 1145.60641490379 22.542 3 0.22348143512991098 0.00039635354736424893 0.0005562945097109218 ['nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 53816 12186 KTEDPDLPAFY True H1975_Epitope_Rep3 1294.6081332068197 1294.60702993586 52.045 2 0.22346808880095773 0.00039635354736424893 0.0005564652240524077 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 35009 11545 GQTLVVQFTVK True H1975_Epitope_Rep3 1218.6972229947398 1218.6961299358602 49.536 2 0.22346642726795957 0.00039635354736424893 0.0005564864805801656 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 134134 20157 VYLDKFIRL True PC9_epitope_Rep1 1165.68593003505 1165.68482993586 82.363 2 0.22346000092714044 0.00039635354736424893 0.0005565687025012415 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 115712 8445 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 39.3 2 0.223426022891872 0.00039635354736424893 0.0005570036376643925 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 86940 17996 QLVEDLDRI True PC9_epitope_Rep4 1099.5873381925899 1099.58624993586 77.279 2 0.2234207348019805 0.00039635354736424893 0.0005570713584139679 ['nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'FGFR2|p.L776Pfs*8|1|0.06|ENSG00000066468|chr10:121479996-121479997|-/GAGG|frameshift_variant', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF'] 133799 19709 VYFPDQHINF True PC9_epitope_Rep2 1278.6033226099 1278.6022299358601 81.198 2 0.2234142048963237 0.00039635354736424893 0.0005571549936004693 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 31246 11227 GDEELDSLIK True NCI_RA007_Epitope_Rep5 1117.5502839775297 1117.54918993586 49.822 2 0.2234078275267881 0.00039635354736424893 0.0005572366872611901 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 7922 6503 ATANQIILK True NCI_RA007_Epitope_Rep5 970.58113061334 970.58002993586 31.679 2 0.2234035943156663 0.00039635354736424893 0.0005572909210381105 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 74395 12378 NESFGFTADLR True NCI_RA007_Epitope_Rep2 1255.5833154413099 1255.5822099358602 52.753 2 0.22340278169732405 0.00039635354736424893 0.0005573013325024725 ['ENSG00000167658|ENST00000309311|EEF2'] 108087 18585 SYANYFIRL True PC9_epitope_Rep6 1145.58694426977 1145.58584993586 84.129 2 0.22339807804366923 0.00039635354736424893 0.0005573616006943868 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 53363 9191 KQTALVELLK True NCI_RA007_Epitope_Rep5 1141.7070594024499 1141.7054249037901 42.005 3 0.22339396868340705 0.00039635354736424893 0.0005574142595222006 ['CON__P02769'] 48406 15742 IYVHDLLTF True NCI_RA007_Epitope_Rep5 1119.59644632431 1119.5953499358602 67.268 2 0.22339157308712188 0.00039635354736424893 0.0005574449598621334 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 113583 13301 TLVEAIKQV True PC9_epitope_Rep6 999.5964463243098 999.59534993586 62.818 2 0.2233870407631038 0.00039635354736424893 0.0005575030476991469 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 88809 20529 QTVAWFPLYY True H1975_Epitope_Rep1 1286.6335601090198 1286.6324699358602 85.377 2 0.22335851523722833 0.00039635354736424893 0.0005578687801588947 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 116337 7740 TTEVHPELY True H1975_Epitope_Rep1 1087.5185899264297 1087.51748993586 34.732 2 0.22335682703644247 0.00039635354736424893 0.0005578904325207558 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 140809 12328 YSDLHAFYY True H1975_Epitope_Rep2 1177.5080252427301 1177.5069299358602 52.504 2 0.223342918377642 0.00039635354736424893 0.0005580688529408487 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 21587 5651 ERQPGAASL True PC9_epitope_Rep5 927.4773938207899 927.47628993586 26.735 2 0.22334149512800097 0.00039635354736424893 0.0005580871136307786 ['ENSG00000180921|ENST00000388913|FAM83H'] 141253 12478 YTDHLQSYVIY True H1975_Epitope_Rep2 1400.6612314088402 1400.6601299358601 53.087 2 0.22333774103432996 0.00039635354736424893 0.0005581352825760814 ['ENSG00000090989|ENST00000381295|EXOC1', 'nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENST00000511971.5_1_4:56749994-56766742:+|nuORF'] 75046 10058 NHSNQFTQL True PC9_epitope_Rep3 1087.50467119779 1087.50356993586 43.644 2 0.2233374719460636 0.00039635354736424893 0.000558138735419982 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A'] 113799 13127 TNAENEFVTIK True PC9_epitope_Rep3 1264.6299312805597 1264.62882993586 55.516 2 0.22333661691164475 0.00039635354736424893 0.0005581497070565226 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 4253 7505 AIDTIINQK True H1975_Epitope_Rep3 1014.5709598524599 1014.56986993586 33.849 2 0.22333112649393078 0.00039635354736424893 0.0005582201641926392 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 70360 5522 LVSSDPEINTK True H1975_Epitope_Rep3 1201.6190322436898 1201.61792993586 26.288 2 0.22332748345164963 0.00039635354736424893 0.0005582669193539779 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF', 'ENST00000484772.1_1_1:27271823-27272075:+|nuORF'] 44465 15059 ILLAELEQLK True NCI_RA007_Epitope_Rep1 1168.7067250492798 1168.70562993586 62.644 2 0.22332733030332744 0.00039635354736424893 0.0005582688849605994 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 61940 11811 LLDISQKNLY True H1975_Epitope_Rep3 1205.66558851329 1205.66448993586 50.578 2 0.22332326585806922 0.00039635354736424893 0.0005583210532706044 ['nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 95666 11620 RYFDPANGKF True PC9_epitope_Rep4 1213.5880068989297 1213.5869099358601 52.455 2 0.2233232288550836 0.00039635354736424893 0.0005583215282369093 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 33728 18754 GLIEILKKV True PC9_epitope_Rep4 1011.6692173417499 1011.66812993586 80.219 2 0.22331607650633356 0.00039635354736424893 0.000558413342621524 ['ENSG00000105185|ENST00000590247|PDCD5'] 9905 19330 AYLLNLNHL True PC9_epitope_Rep4 1069.59202965021 1069.59092993586 82.46 2 0.22330373726658512 0.00039635354736424893 0.0005585717765100256 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 49353 7201 KESEMNVIAA True H1975_Epitope_Rep3 1090.5328600915798 1090.5317699358602 32.674 2 0.22330247881295423 0.00039635354736424893 0.0005585879373900434 ['ENSG00000148411|ENST00000277554|NACC2'] 2326 18588 AEPLEIILHLP True H1975_Epitope_Rep3 1243.71762408615 1243.71652993586 77.956 2 0.22329798406976017 0.00039635354736424893 0.0005586456620640697 ['ENSG00000100138|ENST00000401959|SNU13'] 117283 10368 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep5 1134.59546072858 1134.5943699358602 44.864 2 0.2232886680090018 0.00039635354736424893 0.0005587653245708609 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 130142 8422 VSDSKQFTYY True H1975_Epitope_Rep2 1236.56626839484 1236.56516993586 37.347 2 0.22328846647482553 0.00039635354736424893 0.0005587679135119087 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 10129 8671 AYVHMVTHF True NCI_RA007_Epitope_Rep5 1103.52223583823 1103.52112993586 40.023 2 0.22327567801468065 0.00039635354736424893 0.0005589322207817594 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 9796 20598 AYKYIQELW True PC9_epitope_Rep1 1212.6179100448796 1212.6168099358601 84.046 2 0.2232596512063943 0.00039635354736424893 0.0005591382030817418 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 37709 10235 GVYSFQFNK True NCI_RA007_Epitope_Rep3 1088.52909504048 1088.5279899358602 47.336 2 0.22324051758580873 0.00039635354736424893 0.0005593842149948962 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000525031.2_1_12:94817522-94817669:-|nuORF'] 8077 10098 ATDRWYDEY True H1975_Epitope_Rep2 1217.49891711101 1217.4978299358602 43.836 2 0.22322967923445922 0.00039635354736424893 0.0005595236180633579 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 139007 19567 YKVEYPIMY True PC9_epitope_Rep3 1204.58383303528 1204.58272993586 80.5 2 0.22322008715226196 0.00039635354736424893 0.000559647020670548 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 118023 19437 TYEGIFKTL True PC9_epitope_Rep2 1070.56481184286 1070.56370993586 80.144 2 0.22321104717493764 0.00039635354736424893 0.0005597633454165219 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 47725 18062 IYDPNLAFLRF True NCI_RA007_Epitope_Rep2 1367.7237720957498 1367.72266993586 75.012 2 0.22320803473399475 0.00039635354736424893 0.0005598021143347725 ['ENSG00000197943|ENST00000564138|PLCG2'] 134018 8582 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5287299358602 40.491 2 0.2231992562093358 0.00039635354736424893 0.0005599151058250963 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 24490 7570 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.4923499358601 34.07 2 0.22319876365123123 0.00039635354736424893 0.0005599214463923157 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 55013 10287 KYQKGFSLW True NCI_RA007_Epitope_Rep5 1155.6076797143498 1155.60658993586 46.198 2 0.22319766895574486 0.00039635354736424893 0.0005599355383691232 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 116313 5538 TTEERTQLY True H1975_Epitope_Rep2 1139.54586730343 1139.5447699358601 26.31 2 0.22319680856594226 0.00039635354736424893 0.0005599466143867913 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 138300 6131 YHDEADQSAL True PC9_epitope_Rep4 1147.47818166643 1147.47708993586 30.598 2 0.22316842299217826 0.00039635354736424893 0.0005603121524142748 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 45956 15671 ISEQFTAM[Oxidation]FR True PC9_epitope_Rep3 1244.58595867404 1244.58486993586 65.422 2 0.22316378446669635 0.00039635354736424893 0.0005603719082389873 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 38383 6613 HELEETTVP True H1975_Epitope_Rep2 1053.49785448185 1053.4967499358602 30.345 2 0.22315406663368073 0.00039635354736424893 0.0005604971189962828 ['ENSG00000204560|ENST00000376442|DHX16'] 138572 9774 YIDEQFERY True H1975_Epitope_Rep1 1261.5615173675699 1261.5604299358602 42.524 2 0.22314723621227556 0.00039635354736424893 0.0005605851433000875 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 98312 9357 SEVQYIQEA True H1975_Epitope_Rep3 1065.4978544818498 1065.4967499358602 40.992 2 0.22312922333300284 0.00039635354736424893 0.0005608173435498059 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 23688 20522 EYDNFFQHL True PC9_epitope_Rep2 1211.5247379360299 1211.52364993586 84.369 2 0.2231218678723177 0.00039635354736424893 0.0005609121889975956 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF'] 95656 13656 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.5869099358601 57.383 2 0.22310393028528436 0.00039635354736424893 0.0005611435538215862 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 25334 10728 FDVSGYPTLK True H1975_Epitope_Rep1 1125.57062549929 1125.5695299358601 46.228 2 0.22309489902603374 0.00039635354736424893 0.0005612600781758675 ['ENSG00000155660|ENST00000652332|PDIA4'] 57317 7546 LEAANGELEVK True NCI_RA007_Epitope_Rep2 1171.6084675599898 1171.60736993586 33.978 2 0.22308551606719534 0.00039635354736424893 0.0005613811659915176 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 26753 7172 FKDLGEENFK True NCI_RA007_Epitope_Rep4 1225.5979028762897 1225.5968099358602 34.21 2 0.2230509664024808 0.00039635354736424893 0.0005618272581026291 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 103879 8547 SPYSGPKFNSA True PC9_epitope_Rep4 1153.54038800017 1153.53928993586 40.355 2 0.22304774165867566 0.00039635354736424893 0.0005618689129096242 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 134886 11147 VYVQNVVKL True NCI_RA007_Epitope_Rep1 1060.6280808057597 1060.6269899358601 47.358 2 0.2230073428567421 0.00039635354736424893 0.0005623910167948573 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 24225 7109 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56954993586 32.154 2 0.22300662719608305 0.00039635354736424893 0.000562400270198643 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 73185 13317 MRYNEKELQAL True PC9_epitope_Rep1 1393.70238502817 1393.70074490379 56.085 3 0.22298063572546736 0.00039635354736424893 0.000562736440240151 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 133782 11754 VYEYVVERF True NCI_RA007_Epitope_Rep3 1202.5971746002995 1202.5960699358602 53.344 2 0.222977058142579 0.00039635354736424893 0.0005627827279791743 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 24272 18729 EYTDVLQKI True PC9_epitope_Rep5 1107.58119018299 1107.58008993586 77.056 2 0.22296925651221328 0.00039635354736424893 0.0005628836808406213 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 66261 16216 LSFETTEESLR True PC9_epitope_Rep1 1310.63541058382 1310.63430993586 67.192 2 0.22296668707573047 0.00039635354736424893 0.0005629169332484932 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 54753 15700 KYMVYPQTF True PC9_epitope_Rep4 1175.5685173243098 1175.56740993586 68.315 2 0.22296604640550569 0.00039635354736424893 0.0005629252248005734 ['ENSG00000112996|ENST00000507110|MRPS30'] 115170 7677 TRDPQFQKL True PC9_epitope_Rep1 1131.6036569630699 1131.6020249037902 34.351 3 0.22294810773794163 0.00039635354736424893 0.0005631574367386907 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 138319 18189 YHDINVYSL True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 74.973 2 0.22294618851195847 0.00039635354736424893 0.0005631822863696681 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 108522 17426 SYMLVNENRF True PC9_epitope_Rep5 1271.5968573304701 1271.59576993586 72.029 2 0.2229450869371354 0.00039635354736424893 0.0005631965497663972 ['ENSG00000182195|ENST00000370526|LDOC1'] 91047 20812 RFLDDLGLKF True PC9_epitope_Rep2 1222.6710082468996 1222.66936490379 85.495 3 0.22294427456132343 0.00039635354736424893 0.000563207068792478 ['ENSG00000046604|ENST00000261590|DSG2'] 120528 5658 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep1 1114.46008945458 1114.45898993586 26.068 2 0.22294313176669675 0.00039635354736424893 0.0005632218665712834 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 65798 17313 LSDILRFIY True H1975_Epitope_Rep2 1138.63864548946 1138.63754993586 71.887 2 0.22293875397987165 0.00039635354736424893 0.0005632785571127338 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 72690 6106 MMDPNSTQRY True H1975_Epitope_Rep3 1241.51689275761 1241.51578993586 28.499 2 0.22293439000800877 0.00039635354736424893 0.0005633350744542813 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 121775 17502 VFNPYTEFK True PC9_epitope_Rep5 1143.5600608155898 1143.5589699358602 72.324 2 0.22293396182837297 0.00039635354736424893 0.0005633406200703102 ['ENSG00000142634|ENST00000375980|EFHD2'] 28504 10665 FSDYLHPQY True H1975_Epitope_Rep3 1168.5189242796 1168.5178299358602 46.097 2 0.2229317614835967 0.00039635354736424893 0.0005633691189436532 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 90279 8693 REELFIVSK True NCI_RA007_Epitope_Rep2 1119.62880908175 1119.6277099358601 38.461 2 0.22293129260745906 0.00039635354736424893 0.0005633751920160163 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 7921 6412 ATANQIILK True NCI_RA007_Epitope_Rep5 970.58113061334 970.58002993586 31.335 2 0.22288530701950834 0.00039635354736424893 0.0005639711351022994 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 88918 20628 QVFPGLLERV True PC9_epitope_Rep1 1156.6604435631998 1156.65934993586 84.164 2 0.22287326195902843 0.00039635354736424893 0.0005641273357003078 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 53994 5981 KVFAGYYTK True NCI_RA007_Epitope_Rep4 1075.57023157647 1075.56912993586 29.626 2 0.22285757950233923 0.00039635354736424893 0.0005643307711796091 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 116280 9666 TTDGKLPEV True PC9_epitope_Rep5 958.4971262058599 958.49602993586 42.147 2 0.22284625487315987 0.00039635354736424893 0.0005644777219514591 ['ENSG00000149257|ENST00000358171|SERPINH1'] 100805 9998 SLEIDLDSM[Oxidation]R True H1975_Epitope_Rep3 1193.55980349585 1193.5587099358602 43.493 2 0.22283303815831254 0.00039635354736424893 0.0005646492733779596 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'CON__H-INV:HIT000015463', 'ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 130114 3870 VSDPSSPQYGK True NCI_RA007_Epitope_Rep4 1163.5458673034298 1163.5447699358601 21.093 2 0.22282850919992717 0.00039635354736424893 0.0005647080707659378 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1'] 62638 11051 LLLEPYNKY True H1975_Epitope_Rep1 1151.62266107215 1151.6215699358602 47.469 2 0.22282343873913155 0.00039635354736424893 0.0005647739055200054 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 78259 11709 NYIDKVRFL True NCI_RA007_Epitope_Rep4 1166.64479349906 1166.64368993586 52.007 2 0.22281731450535563 0.00039635354736424893 0.0005648534327077459 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 39476 9985 HLDGQPFLRY True H1975_Epitope_Rep2 1244.63020606408 1244.62910993586 43.397 2 0.22281364578091498 0.00039635354736424893 0.0005649010788795217 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'ENSG00000204520|ENST00000449934|MICA'] 15000 15557 DYKESFNTI True PC9_epitope_Rep3 1115.5135045459901 1115.5124099358602 64.988 2 0.2228095769429112 0.00039635354736424893 0.0005649539260911153 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 138320 15658 YHDINVYSL True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 72.434 2 0.22279984015613669 0.00039635354736424893 0.0005650804103537408 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 23676 19762 EYDLIVHQL True PC9_epitope_Rep1 1128.58152453616 1128.5804299358601 80.841 2 0.22278761054285193 0.00039635354736424893 0.0005652393175600052 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 16292 8140 EEFQFIKKA True NCI_RA007_Epitope_Rep4 1138.60225998074 1138.60116993586 38.101 2 0.2227798771895555 0.00039635354736424893 0.0005653398251169911 ['ENSG00000140259|ENST00000267812|MFAP1'] 95661 12246 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.58635490379 52.416 3 0.22277981482956294 0.00039635354736424893 0.0005653406356598247 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 8217 14141 [Acetylation]-ATFVELSTK True H1975_Epitope_Rep3 1036.54407671458 1036.5429699358601 59.725 2 0.2227748500011389 0.00039635354736424893 0.000565405171258356 ['nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000198074|ENST00000359579|AKR1B10', 'AKR1B10|p.T244Nfs*29|1|0.24|ENSG00000198074|chr7:134537643-134537644|-/A|frameshift_variant'] 121575 8441 VFEDAAEIR True NCI_RA007_Epitope_Rep2 1048.5189242795998 1048.5178299358602 37.474 2 0.22276671444196536 0.00039635354736424893 0.0005655109377573052 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 108309 6498 SYISRTNQL True NCI_RA007_Epitope_Rep3 1080.5563724174801 1080.55526993586 32.596 2 0.22275393941824367 0.00039635354736424893 0.0005656770597691173 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 68443 4967 LTEVSQKENY True H1975_Epitope_Rep3 1209.5877321154098 1209.5866299358602 24.234 2 0.22273531893827342 0.00039635354736424893 0.0005659192817806769 ['ENSG00000146278|ENST00000336032|PNRC1', 'nc|ENSG00000146278|Q12796-2|PNRC1'] 108528 14458 SYM[Oxidation]LVNENRF True PC9_epitope_Rep2 1287.59177233047 1287.5906699358602 60.882 2 0.2227347178793654 0.00039635354736424893 0.0005659271023083029 ['ENSG00000182195|ENST00000370526|LDOC1'] 83527 6678 PTTLTDEEINR True H1975_Epitope_Rep3 1287.6306595565497 1287.6295699358602 30.642 2 0.22273390205258323 0.00039635354736424893 0.0005659377174078772 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 109818 6856 TEEFLDQNKA True H1975_Epitope_Rep2 1193.5564319871298 1193.55532993586 31.29 2 0.22272998324524315 0.00039635354736424893 0.0005659887096072031 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'nc|ENSG00000064961|Q9P0W2-2|HMG20B'] 29079 20606 FTIFRTISV True PC9_epitope_Rep2 1082.6124307416198 1082.61132993586 84.695 2 0.22272832688962035 0.00039635354736424893 0.0005660102637792139 ['ENSG00000105447|ENST00000253237|GRWD1'] 106415 7046 STIGVDGSVYK True NCI_RA007_Epitope_Rep3 1124.5713537752797 1124.5702499358601 34.834 2 0.22271656067214077 0.00039635354736424893 0.0005661634013900832 ['ENSG00000159399|ENST00000290573|HK2', 'ENST00000447818.2_1_X:79828255-79829731:-|nuORF'] 48360 20167 IYTDMGRFTI True PC9_epitope_Rep1 1215.5957947013098 1215.59468993586 82.402 2 0.22271014204226106 0.00039635354736424893 0.0005662469575399978 ['ENSG00000105402|ENST00000263354|NAPA', 'ENST00000602082.5_1_19:47996374-48018112:-|nuORF', 'ENST00000596892.5_1_19:47996374-48000675:-|nuORF', 'ENST00000602174.5_1_19:47996374-48018112:-|nuORF', 'ENST00000601927.1_1_19:47996374-47999001:-|nuORF', 'ENST00000594288.5_1_19:47996374-48015977:-|nuORF', 'ENST00000597778.5_1_19:47996282-47999001:-|nuORF', 'ENSG00000125814|ENST00000377026|NAPB', 'nc|ENSG00000125814|Q9H115-2|NAPB'] 15649 6351 EATDAIGHLDR True NCI_RA007_Epitope_Rep1 1196.5785644140399 1196.57692490379 28.73 3 0.2226925156030595 0.00039635354736424893 0.0005664764778511836 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 72752 15510 [Acetylation]-M[Oxidation]NPEYDYLFK True H1975_Epitope_Rep1 1376.5958549677 1376.5947499358601 64.932 2 0.22267126211671362 0.00039635354736424893 0.0005667533514062174 ['ENSG00000174903|ENST00000311481|RAB1B', 'ENST00000494188.1_1_2:65298326-65357199:-|nuORF', 'nc|ENSG00000138069|P62820-3|RAB1A', 'nc|ENSG00000138069|P62820-2|RAB1A', 'ENSG00000138069|ENST00000409784|RAB1A'] 133650 10023 VYANGIRNI True PC9_epitope_Rep2 1018.5559784946599 1018.55488993586 43.879 2 0.222671212803878 0.00039635354736424893 0.0005667539939725696 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 11012 4941 DAPQDFHPDR True NCI_RA007_Epitope_Rep2 1196.52104953792 1196.51941490379 23.841 3 0.22266655222657078 0.00039635354736424893 0.000566814726494068 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 134219 21093 VYMDWYEKF True PC9_epitope_Rep1 1279.5583465634297 1279.5577749679298 85.964 1 0.22265980343628086 0.00039635354736424893 0.0005669026823343738 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 131645 5140 VTLTSEEEAR True NCI_RA007_Epitope_Rep5 1133.5564319871298 1133.55532993586 26.466 2 0.22265222293099016 0.00039635354736424893 0.0005670014941053655 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 925 7632 [Acetylation]-ADM[Oxidation]QNLVER True H1975_Epitope_Rep1 1132.51827335334 1132.51716993586 34.342 2 0.2226485974496609 0.00039635354736424893 0.0005670487583078332 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1'] 21647 14496 ERSDLEYQL True PC9_epitope_Rep1 1151.54586730343 1151.5447699358601 60.583 2 0.22264814223149612 0.00039635354736424893 0.0005670546931160031 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 49408 7323 KEVEQFTQVA True H1975_Epitope_Rep2 1177.5979028762902 1177.5968099358602 33.108 2 0.22264768303304056 0.00039635354736424893 0.0005670606798794939 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 35010 12074 GQTLVVQFTVK True NCI_RA007_Epitope_Rep2 1218.6972229947398 1218.6961299358602 51.558 2 0.22263320777570747 0.00039635354736424893 0.000567249432412482 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 44161 8037 IITEGFEAAK True H1975_Epitope_Rep3 1077.57062549929 1077.5695299358601 35.888 2 0.22261657268392424 0.00039635354736424893 0.0005674664263183408 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 21510 6916 ERMAGNEAL True PC9_epitope_Rep1 989.4600295044899 989.4589299358599 31.408 2 0.222603489915923 0.00039635354736424893 0.0005676371409869584 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 77613 5842 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49166993586 27.459 2 0.222601363617787 0.00039635354736424893 0.0005676648915336016 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 122066 22105 VFYPYPQYF True PC9_epitope_Rep2 1222.5698972232997 1222.56937496793 90.5 1 0.22259681108303056 0.00039635354736424893 0.0005677243117337569 ['ENSG00000103160|ENST00000219439|HSDL1'] 41566 7978 HYVEKPSTF True PC9_epitope_Rep5 1106.53965972418 1106.53856993586 35.627 2 0.22257651519101157 0.00039635354736424893 0.0005679892919561629 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220366576-220368936:+|nuORF'] 1335 7357 AEDVLSGKVSA True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 33.274 2 0.22255901210689616 0.00039635354736424893 0.0005682179093350623 ['ENSG00000175390|ENST00000651655|EIF3F'] 91543 10349 RIIDLVLQK True NCI_RA007_Epitope_Rep5 1096.6968290719199 1096.69572993586 46.437 2 0.22255736815063218 0.00039635354736424893 0.0005682393866917995 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 140195 11705 YQTQLIQRV True PC9_epitope_Rep4 1147.6349570913499 1147.63386993586 52.785 2 0.22254968450530466 0.00039635354736424893 0.0005683397799632511 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 10111 9441 AYVEKVERL True PC9_epitope_Rep1 1105.6131590176099 1105.61206993586 41.172 2 0.22252357804384285 0.00039635354736424893 0.0005686810157552169 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 116488 5051 TTNDIVISK True NCI_RA007_Epitope_Rep3 989.53932537101 989.53822993586 26.864 2 0.22251432424823517 0.00039635354736424893 0.0005688020208328456 ['ENSG00000113141|ENST00000417647|IK'] 26272 21010 FHFQDQQILTL True PC9_epitope_Rep5 1388.7088503075997 1388.7077499358602 85.872 2 0.2225105765552727 0.00039635354736424893 0.000568851034006308 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 2451 8698 AEQKSNYFEV True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 38.418 2 0.22250781922990945 0.00039635354736424893 0.0005688870976348265 ['ENSG00000163840|ENST00000296161|DTX3L'] 1025 8200 AEAEFYRQV True H1975_Epitope_Rep2 1111.5298233164701 1111.5287299358602 36.494 2 0.22250197400412516 0.00039635354736424893 0.000568963556137654 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 75569 9186 NLDDGIDDER True PC9_epitope_Rep1 1160.49456000656 1160.49346993586 40.184 2 0.22249696193537677 0.00039635354736424893 0.000569029124736794 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 140833 5233 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 25.214 2 0.22247832827693853 0.00039635354736424893 0.0005692729594134106 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 114018 6394 TPAQYDASELK True H1975_Epitope_Rep3 1221.58773211541 1221.5866299358602 29.573 2 0.22247521802400666 0.00039635354736424893 0.0005693136694942672 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 110667 10212 TGAAPIIDVVR True NCI_RA007_Epitope_Rep5 1110.6397081186199 1110.6386099358601 45.912 2 0.22245975394465978 0.00039635354736424893 0.0005695161221011519 ['ENSG00000166441|ENST00000314138|RPL27A'] 118315 19728 TYLVDMQRF True PC9_epitope_Rep1 1171.5695799534699 1171.56848993586 80.711 2 0.2224477753964522 0.00039635354736424893 0.0005696729924842833 ['ENSG00000180340|ENST00000315323|FZD2'] 24848 11762 FAYDGKDYL True NCI_RA007_Epitope_Rep2 1090.4971262058598 1090.4960299358602 50.35 2 0.22244315808522533 0.00039635354736424893 0.0005697334721043347 ['ENSG00000204592|ENST00000376630|HLA-E'] 108250 16491 SYIEHIFEI True NCI_RA007_Epitope_Rep2 1149.57062549929 1149.5695299358601 68.874 2 0.2224421849738851 0.00039635354736424893 0.0005697462191764571 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 118241 9046 TYLEKAIKI True NCI_RA007_Epitope_Rep5 1077.6433965167298 1077.6422899358602 41.454 2 0.22243910435999514 0.00039635354736424893 0.0005697865749322416 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 139947 7539 YQAVTATLEEK True H1975_Epitope_Rep3 1251.63468230783 1251.63358993586 33.981 2 0.22243785922746825 0.00039635354736424893 0.0005698028868665381 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 5423 8371 ALTPDETYVPK True H1975_Epitope_Rep1 1232.6288686514001 1232.6277699358602 37.126 2 0.2224344327103865 0.00039635354736424893 0.0005698477785806196 ['CON__P02769'] 107644 6679 SVQEYFVRK True NCI_RA007_Epitope_Rep5 1154.6084079903396 1154.6067749037902 32.359 3 0.22241925574255797 0.00039635354736424893 0.0005700466587558286 ['ENSG00000163781|ENST00000260810|TOPBP1'] 67987 15536 LTDFDIRFY True H1975_Epitope_Rep3 1188.5815245361598 1188.5804299358601 65.178 2 0.22240520353701893 0.00039635354736424893 0.0005702308620500507 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 8315 7469 ATINNPNLLTK True NCI_RA007_Epitope_Rep3 1197.67173652289 1197.67062993586 36.499 2 0.22239553658770073 0.00039635354736424893 0.0005703576158995012 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 108072 18824 SYANVKQWL True PC9_epitope_Rep5 1107.57129420563 1107.57018993586 77.421 2 0.22237843322906733 0.00039635354736424893 0.0005705819458302191 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 2401 7804 AEQEPTAEQLA True H1975_Epitope_Rep2 1185.55134660669 1185.5502499358602 34.965 2 0.22237740418823396 0.00039635354736424893 0.000570595445689987 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 136762 19021 WYQTKFETL True PC9_epitope_Rep1 1214.5971746002997 1214.5960699358602 77.955 2 0.22237472378367779 0.00039635354736424893 0.000570630611091327 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 127489 7258 VNLPINGNGKQ True NCI_RA007_Epitope_Rep1 1152.62512068364 1152.62402993586 32.222 2 0.222367972779883 0.00039635354736424893 0.0005707191901026822 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 22383 6102 ETEEGAHDLY True H1975_Epitope_Rep3 1162.4778473132599 1162.4767499358602 28.484 2 0.22236373527946257 0.00039635354736424893 0.0005707747968223595 ['ENST00000431534.5_1_22:41925289-41928713:-|nuORF', 'nc|ENSG00000100413|Q9Y535-2|POLR3H', 'ENSG00000100413|ENST00000355209|POLR3H'] 88861 8373 QVDLNQQQY True H1975_Epitope_Rep2 1134.5305515924601 1134.5294499358602 37.159 2 0.22236314906608748 0.00039635354736424893 0.0005707824898520507 ['ENSG00000114030|ENST00000344337|KPNA1'] 133725 19890 VYDPSLKTLL True PC9_epitope_Rep1 1147.64887581999 1147.6477699358602 81.325 2 0.2223470400074248 0.00039635354736424893 0.0005709939339094502 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 4780 16093 ALDTM[Oxidation]NFDVIK True PC9_epitope_Rep4 1281.62748913285 1281.62638993586 69.838 2 0.22233404725064163 0.00039635354736424893 0.0005711645313105463 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 108396 19217 SYLKEFIHI True PC9_epitope_Rep2 1148.62299542532 1148.6213549037902 79.29 3 0.2223246005195173 0.00039635354736424893 0.0005712886008196149 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENSG00000131966|ENST00000254286|ACTR10'] 99622 4725 SIFKQPVTK True NCI_RA007_Epitope_Rep3 1046.61243074162 1046.61132993586 25.533 2 0.22231127485814672 0.00039635354736424893 0.0005714636605917145 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 53827 10761 KTFALPGIIK True NCI_RA007_Epitope_Rep4 1086.6801163786197 1086.6790099358602 48.238 2 0.22230093947702856 0.00039635354736424893 0.0005715994739876452 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 36637 20931 GVIDLIFEKA True PC9_epitope_Rep4 1103.62266107215 1103.6215699358602 88.671 2 0.22229828012275654 0.00039635354736424893 0.0005716344248104507 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 108715 22732 SYRELFEFF True PC9_epitope_Rep1 1236.5815245361598 1236.5804299358601 92.243 2 0.2222981184975378 0.00039635354736424893 0.000571636549054764 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 56152 17105 LAVNM[Oxidation]VPFPR True PC9_epitope_Rep3 1158.62195025994 1158.6208499358602 70.945 2 0.22229669450236622 0.00039635354736424893 0.0005716552650014184 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 88186 19190 QRVWAEYAL True PC9_epitope_Rep5 1134.5821932425 1134.58108993586 78.853 2 0.2222850517700164 0.00039635354736424893 0.0005718083115899531 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF'] 118158 15868 TYIPVPAKI True PC9_epitope_Rep4 1000.5957180483199 1000.59462993586 68.966 2 0.22228441328801063 0.00039635354736424893 0.0005718167057824082 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 68118 11454 LTDPIQGTEY True H1975_Epitope_Rep1 1135.53971929383 1135.5386299358602 49.038 2 0.22227865726707308 0.00039635354736424893 0.0005718923863983444 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 116764 17228 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54370993586 71.91 2 0.22227597951425473 0.00039635354736424893 0.0005719275971280942 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 108790 12877 SYTRLFSNF True NCI_RA007_Epitope_Rep3 1133.5505587610498 1133.54946993586 57.908 2 0.22227572168711102 0.00039635354736424893 0.0005719309875042411 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 48264 7519 IYQRDPLKL True NCI_RA007_Epitope_Rep3 1144.6604435631998 1144.65934993586 36.699 2 0.22227526786017535 0.00039635354736424893 0.0005719369552880242 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 75770 20670 NLLQVLEKV True PC9_epitope_Rep4 1054.63864548946 1054.63754993586 87.665 2 0.22226881733965803 0.00039635354736424893 0.0005720217858139277 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 32064 12028 GESDDSILRLA True H1975_Epitope_Rep1 1174.58298108814 1174.58188993586 51.275 2 0.2222681511377107 0.00039635354736424893 0.0005720305477271268 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 32016 12884 GEQLTLPPPP True H1975_Epitope_Rep2 1047.5600608155898 1047.5589699358602 54.671 2 0.22225730471221808 0.00039635354736424893 0.0005721732192702666 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000272391|A8CG34|POM121C', 'POM121C|p.F573Cfs*82|1|0.2|ENSG00000272391|chr7:75422534-75422535|-/C|frameshift_variant', 'POM121C|p.Q618Lfs*51|1|0.06|ENSG00000272391|chr7:75422384-75422399|GGAGGTTTGCCAAACT/-|frameshift_variant', 'nc|ENSG00000205578|A6NF01|POM121B', 'nc|ENSG00000196313|Q96HA1-2|POM121', 'ENSG00000272391|ENST00000615331|POM121C', 'nc|ENSG00000196313|Q96HA1-3|POM121', 'POM121|p.R515Q|1|0.19|ENSG00000196313|chr7:72939949-72939949|G/A|missense_variant'] 36710 8068 GVIVHIIEK True NCI_RA007_Epitope_Rep4 1006.61751612206 1006.61640993586 37.811 2 0.22225587556725337 0.00039635354736424893 0.000572192020597018 ['ENSG00000277791|ENST00000619426|PSMB3'] 29691 21959 FVLPELPSV True PC9_epitope_Rep4 999.56408356687 999.56298993586 92.679 2 0.222253391161928 0.00039635354736424893 0.000572224706032061 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 139954 11089 YQAVTATLEEK True PC9_epitope_Rep3 1251.63468230783 1251.63358993586 47.651 2 0.2222380345737334 0.00039635354736424893 0.0005724267825881919 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 55071 12860 KYTKIFNDF True PC9_epitope_Rep6 1174.60225998074 1174.60116993586 60.982 2 0.2222340979281576 0.00039635354736424893 0.000572478596234426 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 84149 16407 PYFNAPVYL True NCI_RA007_Epitope_Rep3 1082.5436824754597 1082.5425899358602 72.272 2 0.22222545750563497 0.00039635354736424893 0.0005725923369154382 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 77394 13421 NSFVNDIFER True H1975_Epitope_Rep3 1239.5884008217497 1239.58730993586 56.894 2 0.22221965092372228 0.00039635354736424893 0.000572668786260953 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 67917 7404 LTDADAMKY True H1975_Epitope_Rep2 1026.46919720586 1026.46808993586 33.423 2 0.22221795092732505 0.00039635354736424893 0.0005726911703187842 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 90222 7013 REDWKIIRA True H1975_Epitope_Rep2 1185.66184054553 1185.66019490379 31.9 3 0.22221320048460622 0.00039635354736424893 0.000572753724625782 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 140192 13151 YQTQLIQRV True PC9_epitope_Rep1 1147.6349570913499 1147.63386993586 55.45 2 0.22217269574758028 0.00039635354736424893 0.000573287373585437 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 125028 5547 VIDDTNITR True NCI_RA007_Epitope_Rep5 1045.5403880001702 1045.53928993586 28.022 2 0.22215755257461206 0.00039635354736424893 0.0005734870126310526 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 60434 5505 LGVIEDHSNR True PC9_epitope_Rep3 1138.5730851107799 1138.57144490379 26.25 3 0.2221515223252316 0.00039635354736424893 0.0005735665314535223 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 21531 12390 ERMPEQIRL True PC9_epitope_Rep5 1170.61792712822 1170.61627490379 52.655 3 0.22214697452352525 0.00039635354736424893 0.0005736265090665822 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 91003 9430 RFEEKHAYF True PC9_epitope_Rep1 1225.5880068989297 1225.58635490379 41.13 3 0.22213055881416102 0.00039635354736424893 0.0005738430561459386 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 28909 12999 FTDHELQEWY True H1975_Epitope_Rep1 1366.58298108814 1366.58188993586 55.082 2 0.22212900615500278 0.00039635354736424893 0.0005738635422236064 ['ENSG00000115756|ENST00000307845|HPCAL1'] 53778 5943 KTAEDAKDFFK True NCI_RA007_Epitope_Rep4 1298.65066672514 1298.64901490379 29.479 3 0.2221275870920141 0.00039635354736424893 0.0005738822662500389 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5'] 18347 6841 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.6049299358601 31.271 2 0.22212744632381026 0.00039635354736424893 0.0005738841236693446 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 37865 15111 GYPLWKVTF True NCI_RA007_Epitope_Rep3 1109.59096702105 1109.5898699358602 66.937 2 0.2221175121124905 0.00039635354736424893 0.0005740152196122708 ['ENSG00000198805|ENST00000361505|PNP'] 88551 8396 QTDDTWRTEY True H1975_Epitope_Rep2 1313.55240923585 1313.5513099358602 37.249 2 0.22211094103832446 0.00039635354736424893 0.0005741019507231271 ['ENSG00000121741|ENST00000610343|ZMYM2'] 126829 21331 VLPVRYFYL True PC9_epitope_Rep5 1168.6644663144798 1168.6633699358601 87.106 2 0.22209722029073276 0.00039635354736424893 0.0005742830922265225 ['KDELC2|p.P92Ffs*17|1|0.05|ENSG00000178202|chr11:108491096-108491097|-/AATGATGTAAAAATACAAAA|frameshift_variant', 'ENSG00000178202|ENST00000323468|POGLUT3'] 89204 9418 QVTDFGFAK True NCI_RA007_Epitope_Rep4 1011.5025459394698 1011.50144993586 43.086 2 0.22208728964340888 0.00039635354736424893 0.0005744142325443656 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'ENST00000536649.5_1_19:14208073-14223129:-|nuORF', 'nc|ENSG00000142875|P22694-10|PRKACB', 'nc|ENSG00000142875|P22694-4|PRKACB', 'nc|ENSG00000142875|P22694-3|PRKACB', 'nc|ENSG00000142875|P22694|PRKACB', 'nc|ENSG00000142875|P22694-5|PRKACB', 'nc|ENSG00000142875|P22694-7|PRKACB', 'nc|ENSG00000142875|P22694-6|PRKACB', 'nc|ENSG00000142875|P22694-9|PRKACB', 'ENST00000587533.1_1_19:14208360-14208546:-|nuORF', 'nc|ENSG00000142875|P22694-8|PRKACB', 'ENSG00000165059|ENST00000377276|PRKACG', 'ENSG00000142875|ENST00000370685|PRKACB'] 15940 8649 EDLYLKPIQR True NCI_RA007_Epitope_Rep2 1273.70303665117 1273.70140490379 38.288 3 0.22208558991591787 0.00039635354736424893 0.0005744366815047313 ['ENSG00000167658|ENST00000309311|EEF2'] 134311 16279 VYNSEYYHF True PC9_epitope_Rep1 1220.5138388991602 1220.51274993586 67.438 2 0.22207633714425873 0.00039635354736424893 0.0005745589018894841 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 136765 18090 WYQTKFETL True PC9_epitope_Rep2 1214.5971746002997 1214.5960699358602 74.885 2 0.22207521078941506 0.00039635354736424893 0.0005745737817556882 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 96174 7603 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.55560993586 37.039 2 0.22206646465478466 0.00039635354736424893 0.0005746893369335358 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 45513 5978 IQNPTMINK True NCI_RA007_Epitope_Rep4 1057.55901526977 1057.5579099358602 29.615 2 0.22206413466594105 0.00039635354736424893 0.0005747201250115803 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2', 'SP2|p.P373Qfs*22|1|0.12|ENSG00000167182|chr17:47923015-47923015|C/-|frameshift_variant'] 8151 5516 ATELTHEDY True H1975_Epitope_Rep3 1077.46146897313 1077.4603699358602 26.265 2 0.2220585546448739 0.00039635354736424893 0.0005747938651929215 ['ENSG00000165916|ENST00000298852|PSMC3'] 28450 11865 FSDIHDFEY True H1975_Epitope_Rep2 1171.48220441771 1171.48110993586 50.717 2 0.22205832636617012 0.00039635354736424893 0.0005747968821064113 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.P172Tfs*35|1|0.24|ENSG00000196455|chr3:130744687-130744705|CTTCTGGAAGATAAGTGGG/-|frameshift_variant'] 53233 19991 KQFEPNDFYL True PC9_epitope_Rep5 1299.6135529404298 1299.61244993586 81.95 2 0.2220389121696109 0.00039635354736424893 0.0005750535167511175 ['ENSG00000101126|ENST00000621696|ADNP'] 120539 12976 VEFTRSLFVN True NCI_RA007_Epitope_Rep1 1210.6346227381798 1210.63352993586 54.464 2 0.2220285402868686 0.00039635354736424893 0.0005751906689172576 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 90777 6165 RESEGFEEHVP True H1975_Epitope_Rep1 1314.5840437173 1314.5824049037901 28.783 3 0.22202692126972354 0.00039635354736424893 0.0005752120808853856 ['ENSG00000119801|ENST00000261353|YPEL5'] 108257 16024 SYIEHIFEI True NCI_RA007_Epitope_Rep4 1149.57062549929 1149.5695299358601 69.506 2 0.22200866722876858 0.00039635354736424893 0.0005754535511836848 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 88379 19809 QSLEYLEQV True PC9_epitope_Rep2 1107.54480467427 1107.54370993586 81.584 2 0.22200675196409228 0.00039635354736424893 0.0005754788928129059 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 134268 19518 VYNEQIRDLL True PC9_epitope_Rep3 1261.6666511424498 1261.66554993586 80.308 2 0.2220007433695786 0.00039635354736424893 0.000575558402185307 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF'] 14551 6996 DTSRPLGDSM[Oxidation]Y True H1975_Epitope_Rep3 1256.5343170239998 1256.5332099358602 31.872 2 0.2219957923642759 0.00039635354736424893 0.0005756239251775683 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 15341 4176 EAGEQGDIEPR True PC9_epitope_Rep4 1199.5418445521498 1199.54074993586 22.417 2 0.22198369586253686 0.00039635354736424893 0.0005757840451564636 ['ENSG00000145907|ENST00000356245|G3BP1'] 40832 9733 HSDPSILGY True H1975_Epitope_Rep3 987.46616043075 987.46506993586 42.459 2 0.22197489231432385 0.00039635354736424893 0.000575900604791205 ['ENSG00000146830|ENST00000678049|GIGYF1'] 10114 9613 AYVEKVERL True PC9_epitope_Rep3 1105.6131590176099 1105.61206993586 41.927 2 0.2219748106313776 0.00039635354736424893 0.0005759016863903492 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 54944 19787 KYPSPFFVF True PC9_epitope_Rep6 1130.5800679841798 1130.5789699358602 88.766 2 0.2219592764545841 0.00039635354736424893 0.0005761074181852522 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 97563 5644 SEETLDEGPPK True NCI_RA007_Epitope_Rep1 1200.55101225352 1200.5499099358601 26.014 2 0.22194591604761385 0.00039635354736424893 0.0005762844199543262 ['ENSG00000100442|ENST00000396062|FKBP3'] 95998 21605 RYLMDPDTFTF True PC9_epitope_Rep5 1404.6383877892797 1404.63728993586 88.143 2 0.22194539360785895 0.00039635354736424893 0.0005762913424657625 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 14341 5285 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 25.171 2 0.22194171883834793 0.00039635354736424893 0.0005763400368182787 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 71041 20415 LYIVHPTMF True PC9_epitope_Rep5 1119.57868808519 1119.57758993586 83.561 2 0.22193455276644117 0.00039635354736424893 0.0005764350062765835 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 118550 12828 TYQQVQQTL True PC9_epitope_Rep3 1107.55603806431 1107.5549499358601 54.363 2 0.2219326764332157 0.00039635354736424893 0.0005764598752619094 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 72674 4928 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 24.082 2 0.22192344841221986 0.00039635354736424893 0.0005765821994381345 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 49518 7070 KFIDTTSKF True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 34.927 2 0.22192247460039494 0.00039635354736424893 0.0005765951095461375 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 140982 16478 YSHDGAFLAV True PC9_epitope_Rep1 1078.5083595959 1078.5072699358602 68.209 2 0.2219133807668028 0.00039635354736424893 0.0005767156831577324 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 90575 8417 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 37.331 2 0.22189767705784122 0.00039635354736424893 0.0005769239555623628 ['ENSG00000026025|ENST00000544301|VIM'] 34151 9817 GNEDIITLR True NCI_RA007_Epitope_Rep1 1029.54547338061 1029.54436993586 42.189 2 0.22189255461468999 0.00039635354736424893 0.000576991908927537 ['ENSG00000132646|ENST00000379143|PCNA'] 139279 20456 YLKDLIEEV True PC9_epitope_Rep3 1120.6015912743999 1120.6004899358602 83.94 2 0.221889216318739 0.00039635354736424893 0.0005770361984544764 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.Y333_K335dup|1|0.36|ENSG00000128272|chr22:39522540-39522541|-/AGTACCTGA|inframe_insertion'] 136443 15797 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.5331499358601 65.949 2 0.2218808325216971 0.00039635354736424893 0.0005771474422211155 ['ENSG00000116221|ENST00000360840|MRPL37'] 133744 19684 VYDVVELKF True PC9_epitope_Rep4 1110.5961119711399 1110.5950099358602 83.836 2 0.22186706439752063 0.00039635354736424893 0.0005773301767746181 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 29127 12698 FTLSHITQL True H1975_Epitope_Rep3 1058.5760452329 1058.57494993586 54.054 2 0.22186147240224668 0.00039635354736424893 0.0005774044119403423 ['ENSG00000148484|ENST00000345264|RSU1'] 67863 20497 LTAPEDVFSKL True PC9_epitope_Rep5 1218.6496040959798 1218.6485099358601 83.881 2 0.22185910897953154 0.00039635354736424893 0.0005774357898598838 ['ENSG00000155561|ENST00000285968|NUP205'] 11497 9061 DFHVDEQTTVK True PC9_epitope_Rep5 1317.62009487285 1317.61843490379 39.797 3 0.2218470422626472 0.00039635354736424893 0.0005775960199782156 ['CON__P34955'] 137555 12333 YEELQSLAGK True PC9_epitope_Rep3 1136.5713537752797 1136.5702499358601 52.466 2 0.22183970807051834 0.00039635354736424893 0.0005776934301933851 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 38304 7472 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.56036993586 33.688 2 0.22183924986431758 0.00039635354736424893 0.0005776995164774493 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 49828 10214 KHTEMITTL True PC9_epitope_Rep1 1072.5586809166 1072.55758993586 44.168 2 0.22183237749573323 0.00039635354736424893 0.0005777908088352595 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1'] 118566 20336 TYQRWQFTL True PC9_epitope_Rep5 1241.61930702721 1241.61820993586 83.258 2 0.22182926803101652 0.00039635354736424893 0.0005778321196364354 ['ENSG00000174231|ENST00000304992|PRPF8'] 118907 14469 VADLHLYLY True H1975_Epitope_Rep2 1105.58079626017 1105.5796899358602 60.811 2 0.22182374352175258 0.00039635354736424893 0.0005779055228280355 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 104720 11790 SQVEDLERV True PC9_epitope_Rep5 1073.53530261973 1073.5342099358602 50.347 2 0.22181945345216433 0.00039635354736424893 0.0005779625306884086 ['ENST00000568312.1_1_16:29815990-29816628:+|nuORF', 'nc|ENSG00000079616|Q14807-2|KIF22', 'ENSG00000079616|ENST00000160827|KIF22'] 49065 10076 KEIDAYIVQA True H1975_Epitope_Rep3 1148.607739284 1148.60664993586 43.796 2 0.22181749907331558 0.00039635354736424893 0.000577988502990186 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 108364 15643 SYLEKQVVTF True PC9_epitope_Rep6 1212.6390394122798 1212.6379499358602 72.375 2 0.22181047895648537 0.00039635354736424893 0.0005780818049971019 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 69507 16462 LVAVELEKV True PC9_epitope_Rep3 998.6011973515799 998.60010993586 68.458 2 0.2218061003036835 0.00039635354736424893 0.0005781400078481074 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 24062 10960 EYNSDLHQF True PC9_epitope_Rep4 1151.4883524273098 1151.48724993586 49.929 2 0.22180478534824477 0.00039635354736424893 0.0005781574879237244 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 23739 12702 EYGFQNALIVR True H1975_Epitope_Rep3 1308.68263555976 1308.68152993586 54.069 2 0.22179653228743282 0.00039635354736424893 0.000578267210311261 ['CON__P02769'] 137563 6715 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep3 1078.5004977145798 1078.49940993586 30.785 2 0.2217956163222043 0.00039635354736424893 0.0005782793891288025 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 23432 9160 EVTEFEDIK True NCI_RA007_Epitope_Rep2 1108.5288202569598 1108.5277299358602 40.237 2 0.22177747756755933 0.00039635354736424893 0.000578520617876891 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 54936 21858 KYPSPFFVF True PC9_epitope_Rep3 1130.5800679841798 1130.5789699358602 89.379 2 0.22177692231255508 0.00039635354736424893 0.0005785280038500435 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 48343 17043 IYSPQFSRL True PC9_epitope_Rep3 1109.5869442697701 1109.58584993586 70.71 2 0.22176416537339486 0.00039635354736424893 0.0005786977220505313 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171225816-171400468:+|nuORF'] 90229 6818 REEDLDAVEA True H1975_Epitope_Rep2 1145.52004647841 1145.51894993586 31.144 2 0.22176205219728423 0.00039635354736424893 0.0005787258405485447 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 68165 5765 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 27.245 2 0.2217352361048677 0.00039635354736424893 0.0005790827818902195 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 54908 11295 KYPNVFKKI True PC9_epitope_Rep5 1135.67536535135 1135.67371490379 48.439 3 0.22172803368853566 0.00039635354736424893 0.0005791786888212392 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 141155 7406 YSTDVSVDEVK True H1975_Epitope_Rep1 1240.5823123818002 1240.5812099358602 33.49 2 0.22172682606556196 0.00039635354736424893 0.0005791947710142208 ['nc|ENSG00000148672|P00367-3|GLUD1', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1'] 26948 10604 FLDSTGSRLDY True H1975_Epitope_Rep1 1272.59863115228 1272.5975299358602 45.742 2 0.22169737318563346 0.00039635354736424893 0.0005795871405461376 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 77114 8551 NRMLAQQAV True PC9_epitope_Rep1 1029.53894853153 1029.53784993586 37.728 2 0.22168365999355685 0.00039635354736424893 0.0005797699178678204 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 24101 16683 EYPDRIMNTF True PC9_epitope_Rep6 1284.5808729131597 1284.5797699358602 76.641 2 0.22168365569370965 0.00039635354736424893 0.0005797699751877292 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 133929 7733 VYIKHPVSL True NCI_RA007_Epitope_Rep2 1054.61751612206 1054.61640993586 34.706 2 0.22168331163998564 0.00039635354736424893 0.0005797745616779971 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 95951 8333 RYLENGKETL True PC9_epitope_Rep3 1221.6353510141698 1221.6337049037902 37.025 3 0.22167288105052443 0.00039635354736424893 0.0005799136264230739 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 53789 12476 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep2 1213.59004099497 1213.58894993586 53.078 2 0.22165963747645107 0.00039635354736424893 0.0005800902432170501 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 95665 11527 RYFDPANGKF True PC9_epitope_Rep4 1213.5880068989297 1213.5869099358601 52.1 2 0.2216547699728383 0.00039635354736424893 0.0005801551699878991 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 70317 7341 LVSESSDVLPK True NCI_RA007_Epitope_Rep3 1172.6288686514001 1172.6277699358602 36.0 2 0.22164766767522415 0.00039635354736424893 0.0005802499193627444 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 99365 10590 [Acetylation]-SHTILLVQPTK True NCI_RA007_Epitope_Rep2 1277.7343370957499 1277.7332299358602 45.792 2 0.22164633522353272 0.00039635354736424893 0.000580267696884286 ['ENSG00000100632|ENST00000557016|ERH'] 62065 9323 LLDTPVKTQY True H1975_Epitope_Rep2 1176.63903941228 1176.6379499358602 40.821 2 0.221644013786972 0.00039635354736424893 0.0005802986707111107 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2'] 133942 8745 VYIKHPVSL True PC9_epitope_Rep4 1054.61751612206 1054.61640993586 41.145 2 0.22163827520849025 0.00039635354736424893 0.0005803752449607482 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 74864 13597 NHHLFTTTI True PC9_epitope_Rep1 1082.5508931142201 1082.5497899358602 57.157 2 0.22163824149691708 0.00039635354736424893 0.000580375694830052 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 9176 5535 AVLKPEAWSRK True NCI_RA007_Epitope_Rep4 1283.73500548579 1283.73334490379 27.885 3 0.22163206320924903 0.00039635354736424893 0.0005804581478539145 ['ENST00000407997.3_1_22:39473245-39473314:+|nuORF'] 138352 13108 YHFEEVQKL True PC9_epitope_Rep5 1191.5924235730297 1191.5907749037901 55.424 3 0.221629016214162 0.00039635354736424893 0.0005804988161925572 ['ENSG00000140848|ENST00000290776|CPNE2'] 105650 8660 SSEEIESAFR True NCI_RA007_Epitope_Rep2 1153.5251318588498 1153.5240299358602 38.332 2 0.22162225960430726 0.00039635354736424893 0.0005805890070743232 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 134877 15307 VYVQHPITF True PC9_epitope_Rep2 1102.5811306133398 1102.58002993586 64.16 2 0.22162116599357184 0.00039635354736424893 0.0005806036065037196 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 25983 9906 FGEENIEVYHS True H1975_Epitope_Rep1 1322.5778957077 1322.57678993586 43.039 2 0.2216175285055433 0.00039635354736424893 0.0005806521687079932 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 106193 16488 STDPWIQMAY True H1975_Epitope_Rep2 1210.53286009158 1210.5317699358602 68.639 2 0.2216006706892035 0.00039635354736424893 0.0005808772818318207 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B', 'nc|ENSG00000165097|Q8NB78-4|KDM1B'] 15471 7996 EALQDVEDENQ True H1975_Epitope_Rep3 1288.5419041218 1288.5408099358601 35.727 2 0.22159018762201238 0.00039635354736424893 0.0005810173130393313 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 26314 19584 FHNELLTQL True PC9_epitope_Rep1 1113.5818588893299 1113.5807699358602 80.157 2 0.22158521885241533 0.00039635354736424893 0.0005810836969344821 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 110786 9656 TGISDVFAK True H1975_Epitope_Rep1 936.4916469026 936.49054993586 42.071 2 0.22156389146958275 0.00039635354736424893 0.0005813687220809641 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 53691 4053 KSFDEQNVPK True NCI_RA007_Epitope_Rep4 1190.59315184902 1190.59150490379 21.854 3 0.2215588675651906 0.00039635354736424893 0.0005814358833644195 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 26947 10492 FLDSTGSRLDY True H1975_Epitope_Rep1 1272.59863115228 1272.5975299358602 45.312 2 0.2215571249807278 0.00039635354736424893 0.0005814591806517754 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 72675 5037 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 24.495 2 0.22154500470550303 0.00039635354736424893 0.0005816212472256674 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 75756 19119 NLLPKLHIV True PC9_epitope_Rep3 1045.66480066765 1045.6637099358602 78.764 2 0.2215345164921678 0.00039635354736424893 0.0005817615272213214 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 108657 19167 SYPTFFPRF True PC9_epitope_Rep6 1160.5654805491997 1160.5643899358602 86.376 2 0.22153228258566787 0.00039635354736424893 0.0005817914101361015 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 127146 6284 VLTVINQTQK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 30.849 2 0.22152482793077558 0.00039635354736424893 0.0005818911420250985 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 7946 7814 ATATANQIILK True NCI_RA007_Epitope_Rep2 1142.66592286646 1142.66482993586 35.024 2 0.22152414480955032 0.00039635354736424893 0.0005819002820009665 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 97177 10400 SDVEAIFSK True NCI_RA007_Epitope_Rep1 994.49712620586 994.49602993586 44.437 2 0.22152184913944123 0.00039635354736424893 0.0005819309984969854 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 48143 20541 IYPHGLVLL True PC9_epitope_Rep3 1023.61170246563 1023.61060993586 84.274 2 0.22151737011343658 0.00039635354736424893 0.0005819909333874598 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 90471 6826 RELAQQVQQVA True NCI_RA007_Epitope_Rep5 1268.68369818892 1268.68260993586 32.941 2 0.22149038754644326 0.00039635354736424893 0.000582352124468152 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 44144 10960 IISIAEDEDLR True NCI_RA007_Epitope_Rep1 1272.6561460284 1272.65504993586 46.627 2 0.22147969310577245 0.00039635354736424893 0.0005824953434476659 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 8129 13753 ATEFIMNEY True H1975_Epitope_Rep2 1116.47976188956 1116.4786699358601 58.046 2 0.2214792888035672 0.00039635354736424893 0.0005825007585193533 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 76426 16606 NQEDFFQRV True PC9_epitope_Rep1 1181.5465360097699 1181.54542993586 68.7 2 0.2214789541562969 0.00039635354736424893 0.0005825052406972437 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 53815 12083 KTEDPDLPAFY True H1975_Epitope_Rep3 1294.6081332068197 1294.60702993586 51.641 2 0.221465875911773 0.00039635354736424893 0.0005826804343840757 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 48086 12079 IYNGDMEKI True PC9_epitope_Rep1 1081.51139637101 1081.51028993586 51.322 2 0.22145960579620558 0.00039635354736424893 0.0005827644464131298 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 105631 8652 SSDSVGGFRY True H1975_Epitope_Rep3 1073.47778774361 1073.4766899358601 38.276 2 0.22145101972619377 0.00039635354736424893 0.0005828795091712161 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 134197 13978 VYLPTHTSL True PC9_epitope_Rep2 1029.54949613189 1029.54838993586 59.039 2 0.22144177230304202 0.00039635354736424893 0.0005830034602831589 ['ENSG00000007944|ENST00000356840|MYLIP'] 106388 8890 STIEYVIQR True NCI_RA007_Epitope_Rep4 1107.59242357303 1107.5913299358601 41.021 2 0.22143821374131406 0.00039635354736424893 0.000583051165772401 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 14460 17210 DTEPPPLLVY True H1975_Epitope_Rep2 1142.5859412102598 1142.5848499358601 71.488 2 0.22143115434516158 0.00039635354736424893 0.0005831458144603925 ['ENSG00000174231|ENST00000304992|PRPF8'] 11491 6237 DFHVDEQTTVK True H1975_Epitope_Rep1 1317.62009487285 1317.61898993586 29.058 2 0.2214263935572531 0.00039635354736424893 0.0005832096533162255 ['CON__P34955'] 29306 15965 FVDDYTVRV True PC9_epitope_Rep2 1112.55022440788 1112.54912993586 66.663 2 0.22141877665395177 0.00039635354736424893 0.0005833118052782093 ['ENSG00000115233|ENST00000409682|PSMD14'] 71037 14063 LYIVHPTMF True NCI_RA007_Epitope_Rep5 1119.57868808519 1119.57758993586 60.783 2 0.22141289339567935 0.00039635354736424893 0.0005833907192344865 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 24854 11648 FAYDGKDYL True NCI_RA007_Epitope_Rep5 1090.4971262058598 1090.4960299358602 51.457 2 0.2214094327438608 0.00039635354736424893 0.0005834371430273592 ['ENSG00000204592|ENST00000376630|HLA-E'] 117066 21550 TVIKDLLGL True PC9_epitope_Rep1 970.6062827320198 970.60518993586 87.714 2 0.22139744788995794 0.00039635354736424893 0.000583597945542583 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 855 7519 ADEGISFR True NCI_RA007_Epitope_Rep2 893.42429561877 893.42318993586 33.873 2 0.22136823873492742 0.00039635354736424893 0.0005839900352726744 ['ENSG00000117450|ENST00000319248|PRDX1'] 31324 16424 GDLGIEIPAEK True PC9_epitope_Rep1 1140.60265390356 1140.60154993586 67.998 2 0.22136695741132403 0.00039635354736424893 0.0005840072411983469 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 29309 16727 FVDDYTVRV True PC9_epitope_Rep3 1112.55022440788 1112.54912993586 69.479 2 0.22135233859167053 0.00039635354736424893 0.0005842035822817347 ['ENSG00000115233|ENST00000409682|PSMD14'] 6751 16517 AQDEHLITF True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 68.773 2 0.22134383141412262 0.00039635354736424893 0.0005843178701748807 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 46610 5786 ITDEQRQYY True H1975_Epitope_Rep2 1214.5567663403 1214.5556699358601 27.25 2 0.22133951480274036 0.00039635354736424893 0.000584375869364524 ['nc|ENSG00000135597|Q96D71-2|REPS1', 'nc|ENSG00000135597|Q96D71-4|REPS1', 'nc|ENSG00000135597|Q96D71-3|REPS1', 'ENSG00000135597|ENST00000450536|REPS1'] 26845 12302 FLDDFESKY True H1975_Epitope_Rep3 1162.51825557326 1162.51714993586 52.5 2 0.22133442071564435 0.00039635354736424893 0.0005844443223645061 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2', 'nc|ENSG00000171475|Q8TF74-2|WIPF2'] 48131 14212 IYPELQIERF True NCI_RA007_Epitope_Rep4 1306.6921376142998 1306.69104993586 61.946 2 0.22132248589311124 0.00039635354736424893 0.0005846047308721276 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.G345Efs*28|1|0.53|ENSG00000077420|chr10:26536206-26536206|G/-|frameshift_variant'] 25621 12287 FENGNRSWFY True H1975_Epitope_Rep2 1318.57308511078 1318.57198993586 52.345 2 0.22131093249426448 0.00039635354736424893 0.0005847600549810051 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5', 'ENST00000477136.5_1_2:27275826-27278122:+|nuORF', 'ENST00000489683.5_1_2:27275826-27279072:+|nuORF', 'nc|ENSG00000084693|Q8NDL9-3|AGBL5'] 20073 11033 EMEEKYYRF True PC9_epitope_Rep4 1293.5699738762899 1293.56833490379 50.215 3 0.2213063173021838 0.00039635354736424893 0.0005848221132826057 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 24044 15585 EYNNNFHVL True PC9_epitope_Rep1 1148.5250722892001 1148.5239699358601 64.77 2 0.2213059042510119 0.00039635354736424893 0.0005848276677082077 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 40220 20687 HQIDLIVQL True PC9_epitope_Rep1 1077.61824439805 1077.6171499358602 84.396 2 0.2213031438666811 0.00039635354736424893 0.0005848647888005339 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 106253 15151 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.5586299358602 63.434 2 0.22129082032641403 0.00039635354736424893 0.0005850305421264615 ['ENSG00000131459|ENST00000253778|GFPT2'] 22238 8658 ESYSVYVYK True NCI_RA007_Epitope_Rep3 1136.5389910178399 1136.5378899358602 41.136 2 0.22127900418593668 0.00039635354736424893 0.0005851895151169973 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 24311 14421 EYVEKFYRI True PC9_epitope_Rep2 1245.6393737654498 1245.63826993586 60.74 2 0.22126669846445862 0.00039635354736424893 0.0005853551209488443 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 78613 20124 NYSPYVNYF True PC9_epitope_Rep4 1165.50802524273 1165.5069299358602 85.542 2 0.2212578056854676 0.00039635354736424893 0.0005854748259360938 ['ENSG00000156162|ENST00000414645|DPY19L4'] 130102 13068 VSDPLIGGTY True H1975_Epitope_Rep2 1020.5127762699999 1020.51227496793 55.388 1 0.2212536184613906 0.00039635354736424893 0.0005855311983297945 ['ENSG00000169359|ENST00000643144|SLC33A1'] 12411 7980 DITSDTSGDFR True H1975_Epitope_Rep1 1212.5258601348398 1212.5247699358601 35.645 2 0.2212458203177285 0.00039635354736424893 0.0005856361988742052 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 14385 12234 DTDDVTYQVY True H1975_Epitope_Rep2 1217.5088130883703 1217.50770993586 52.14 2 0.2212214047855162 0.00039635354736424893 0.0005859650716360211 ['nc|ENSG00000198363|Q12797-10|ASPH', 'ENSG00000198363|ENST00000379454|ASPH', 'ENST00000523897.5_1_8:62496079-62555960:-|nuORF', 'nc|ENSG00000198363|Q12797-9|ASPH', 'nc|ENSG00000198363|Q12797-6|ASPH', 'nc|ENSG00000198363|Q12797-11|ASPH', 'nc|ENSG00000198363|Q12797-5|ASPH', 'nc|ENSG00000198363|Q12797-8|ASPH', 'nc|ENSG00000198363|Q12797-2|ASPH'] 125255 9527 VILEGELER True NCI_RA007_Epitope_Rep1 1056.5815245361598 1056.5804299358601 41.054 2 0.22118743900254517 0.00039635354736424893 0.0005864228927606229 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 29080 20918 FTIFRTISV True PC9_epitope_Rep3 1082.6124307416198 1082.61132993586 85.738 2 0.22117535676996347 0.00039635354736424893 0.0005865858343972035 ['ENSG00000105447|ENST00000253237|GRWD1'] 118268 21898 TYLNWLVRM True PC9_epitope_Rep5 1194.6219498795 1194.6208499358602 89.268 2 0.2211690453519022 0.00039635354736424893 0.0005866709685815836 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 137348 7052 YDNEFGYSNR True H1975_Epitope_Rep1 1263.5156298043098 1263.51452993586 32.158 2 0.22115048953923006 0.00039635354736424893 0.000586921338181716 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 85750 17274 QHDFTSQIF True PC9_epitope_Rep2 1121.51417325233 1121.5130699358601 71.702 2 0.2211457410384693 0.00039635354736424893 0.0005869854259099387 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 70853 18281 LYDPVISKL True PC9_epitope_Rep2 1046.6011973515801 1046.60010993586 75.639 2 0.22114150455746343 0.00039635354736424893 0.0005870426091346141 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 78636 19936 NYTDIKDYL True PC9_epitope_Rep3 1143.54480467427 1143.54370993586 81.927 2 0.2211375288388696 0.00039635354736424893 0.0005870962777212145 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 88675 13829 QTETGTPYMLY True H1975_Epitope_Rep2 1302.5802042068199 1302.57910993586 58.34 2 0.2211331195362403 0.00039635354736424893 0.0005871558050557489 ['ENSG00000167325|ENST00000300738|RRM1'] 88546 11351 QTDADFYQQY True H1975_Epitope_Rep3 1277.52004647841 1277.51894993586 48.773 2 0.22112941860717372 0.00039635354736424893 0.0005872057737409072 ['nc|ENSG00000116809|Q13105-3|ZBTB17', 'ENSG00000116809|ENST00000375743|ZBTB17', 'nc|ENSG00000116809|Q13105-2|ZBTB17'] 54732 20630 KYMDVQFDF True PC9_epitope_Rep3 1191.52704643515 1191.5259499358601 84.624 2 0.22112193140329983 0.00039635354736424893 0.0005873068764682674 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 78385 20653 NYLDQIAKF True PC9_epitope_Rep3 1110.5709598524597 1110.5698699358602 84.713 2 0.22111593464473195 0.00039635354736424893 0.0005873878657094258 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'KDM5C|p.Y601Lfs*21|1|0.69|ENSG00000126012|chrX:53201918-53201919|-/A|frameshift_variant', 'KDM5C|p.T270Qfs*2|1|0.16|ENSG00000126012|chrX:53215951-53215951|G/-|frameshift_variant', 'KDM5C|p.E293Rfs*6|1|0.35|ENSG00000126012|chrX:53215881-53215881|C/-|frameshift_variant'] 38966 18992 HHIYLEGTLL True PC9_epitope_Rep1 1194.6397081186199 1194.6386099358601 77.839 2 0.2211144192425026 0.00039635354736424893 0.0005874083337524968 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 54172 6022 KVTEGSFVYK True NCI_RA007_Epitope_Rep1 1156.61282466444 1156.61116490379 27.466 3 0.22110053420456185 0.00039635354736424893 0.0005875959077472954 ['ENSG00000057608|ENST00000380191|GDI2'] 14680 13099 DVIEEYFK True H1975_Epitope_Rep3 1041.50187723313 1041.5007899358602 55.63 2 0.22109685080013444 0.00039635354736424893 0.0005876456772128714 ['ENSG00000112306|ENST00000230050|RPS12'] 24084 19165 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5797699358602 78.512 2 0.22109399496350143 0.00039635354736424893 0.0005876842676495262 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 48030 21661 IYLPYLHEW True PC9_epitope_Rep1 1232.62299542532 1232.62188993586 88.148 2 0.22108726122441605 0.00039635354736424893 0.0005877752695915428 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 41459 12932 HYKPTPLYF True PC9_epitope_Rep4 1164.59678067748 1164.59568993586 57.628 2 0.22107842874105763 0.00039635354736424893 0.0005878946560830429 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 11494 6947 DFHVDEQTTVK True NCI_RA007_Epitope_Rep1 1317.62009487285 1317.61898993586 31.026 2 0.22107411686573972 0.00039635354736424893 0.0005879529474725089 ['CON__P34955'] 88669 12763 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep2 1318.5751192068199 1318.5740299358602 54.196 2 0.22107073210078615 0.00039635354736424893 0.0005879987095032287 ['ENSG00000167325|ENST00000300738|RRM1'] 86568 10997 QLDVAGRVMQY True H1975_Epitope_Rep3 1278.6390564956198 1278.6379499358602 47.389 2 0.22105355246808736 0.00039635354736424893 0.0005882310332889438 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 88257 14013 QSDPWQQELY True H1975_Epitope_Rep3 1292.5673310240002 1292.56622993586 59.222 2 0.22104422618871336 0.00039635354736424893 0.0005883571930952011 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 141263 5257 YTDHQNSSSYY True H1975_Epitope_Rep3 1363.5316737912701 1363.53056993586 25.305 2 0.22102692098450386 0.00039635354736424893 0.0005885913585063746 ['ENSG00000125398|ENST00000245479|SOX9'] 55000 17749 KYQIINEEF True PC9_epitope_Rep3 1182.5920892198599 1182.59098993586 73.467 2 0.22101097088300803 0.00039635354736424893 0.0005888072701554704 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 140835 5858 YSDMREANY True H1975_Epitope_Rep2 1147.46042342731 1147.45932993586 27.518 2 0.2209966054870966 0.00039635354736424893 0.0005890017981465552 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 118452 15480 TYPIKTPTF True PC9_epitope_Rep4 1066.5698972233001 1066.5688099358601 67.471 2 0.22099238181737743 0.00039635354736424893 0.0005890590049367495 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 98427 7632 SFETTEESLR True NCI_RA007_Epitope_Rep4 1197.55134660669 1197.5502499358602 36.009 2 0.22098753783216923 0.00039635354736424893 0.0005891246203498694 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 42032 9076 IDIDPEETVK True H1975_Epitope_Rep3 1157.58158410581 1157.5804899358602 39.896 2 0.22098277102093414 0.00039635354736424893 0.00058918919754283 ['ENSG00000119318|ENST00000358015|RAD23B'] 68383 8053 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 35.924 2 0.22097442572319054 0.00039635354736424893 0.0005893022704964148 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 95910 16513 RYLDWIKKI True PC9_epitope_Rep6 1233.7233781729299 1233.7217249037901 75.951 3 0.2209705852598569 0.00039635354736424893 0.0005893543134065269 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 46686 8529 ITDSAGHILYS True H1975_Epitope_Rep3 1175.58225281215 1175.5811499358601 37.792 2 0.22096056931676503 0.00039635354736424893 0.0005894900632130919 ['ENSG00000170348|ENST00000303575|TMED10'] 118068 13548 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 59.318 2 0.22094488990440245 0.00039635354736424893 0.0005897026351293066 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 61971 11182 LLDPAQKCLY True H1975_Epitope_Rep2 1162.60563110902 1162.60452993586 48.05 2 0.22094107309301939 0.00039635354736424893 0.000589754392770736 ['ZNF268|p.K778Sfs*18|1|0.36|ENSG00000090612|chr12:133204016-133204016|A/-|frameshift_variant', 'ENSG00000090612|ENST00000536435|ZNF268', 'ENST00000585488.1_1_12:133768044-133768326:+|nuORF', 'nc|ENSG00000090612|Q14587-8|ZNF268'] 86589 5391 QLEEAEEEAQR True PC9_epitope_Rep4 1330.60008770426 1330.5989899358601 27.465 2 0.2209266164033098 0.00039635354736424893 0.000589950473173408 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 45579 13242 IQTAVRLLL True NCI_RA007_Epitope_Rep5 1025.6597152872098 1025.65860993586 57.616 2 0.22091067450403346 0.00039635354736424893 0.0005901667737554709 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 72925 15205 MPWGDPNYRSA True PC9_epitope_Rep1 1292.5608061749201 1292.5597099358602 63.307 2 0.2208946456656217 0.00039635354736424893 0.0005903843341566953 ['ENSG00000124226|ENST00000244061|RNF114'] 29049 7739 FTETSKLQY True H1975_Epitope_Rep2 1115.54989005471 1115.5487899358602 34.72 2 0.22088339578781482 0.00039635354736424893 0.0005905370774923204 ['ENSG00000100490|ENST00000395834|CDKL1'] 26748 8391 FKDLGEEHFK True PC9_epitope_Rep5 1248.6138872935996 1248.61225490379 37.218 3 0.22088022430146984 0.00039635354736424893 0.0005905801449822651 ['CON__P02769'] 36307 8162 GVEGSLIVEK True NCI_RA007_Epitope_Rep1 1029.57062549929 1029.5695299358601 35.747 2 0.22087319887967263 0.00039635354736424893 0.0005906755585654749 ['ENSG00000144381|ENST00000388968|HSPD1'] 54317 20653 KYDEIFYNL True PC9_epitope_Rep1 1203.5811901829898 1203.58008993586 84.263 2 0.22085900446587559 0.00039635354736424893 0.0005908683827825343 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 14331 4482 DSYVGDEAQSK True NCI_RA007_Epitope_Rep2 1197.51496109797 1197.5138699358602 22.066 2 0.22085708278016578 0.00039635354736424893 0.000590894492803193 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 125454 20652 VIVELIYKV True PC9_epitope_Rep5 1074.6688829885798 1074.6677899358601 84.491 2 0.22085609149004856 0.00039635354736424893 0.0005909079619543036 ['ENSG00000129083|ENST00000439561|COPB1'] 29346 19315 FVDGLTFKV True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 82.402 2 0.2208455341345072 0.00039635354736424893 0.0005910514290994398 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 58051 8344 LEIIGNSKNVA True H1975_Epitope_Rep2 1156.64518742188 1156.6440899358602 37.047 2 0.22084066687338663 0.00039635354736424893 0.0005911175835750877 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 118318 18587 TYLVDMQRF True PC9_epitope_Rep4 1171.5695799534699 1171.56848993586 79.57 2 0.22083768215646105 0.00039635354736424893 0.0005911581547021186 ['ENSG00000180340|ENST00000315323|FZD2'] 122069 21402 VFYPYPQYF True PC9_epitope_Rep4 1222.5698972232997 1222.56937496793 90.493 1 0.22082731713780093 0.00039635354736424893 0.0005912990676484111 ['ENSG00000103160|ENST00000219439|HSDL1'] 72122 15675 M[Oxidation]FLSFPTTK True PC9_epitope_Rep6 1086.54196860374 1086.5408699358602 72.503 2 0.22082154550836966 0.00039635354736424893 0.0005913775478465379 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 140951 10043 YSEVYPGQQY True H1975_Epitope_Rep3 1232.5349682665599 1232.5338699358601 43.666 2 0.22080921127407172 0.00039635354736424893 0.0005915452986300541 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 54584 13868 KYITQGQLLQF True NCI_RA007_Epitope_Rep2 1337.73433677945 1337.7332299358602 58.596 2 0.22080420248888236 0.00039635354736424893 0.0005916134338493066 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 59318 17058 LFIATSQKF True PC9_epitope_Rep3 1053.58588164061 1053.58478993586 70.766 2 0.22080109357893019 0.00039635354736424893 0.0005916557287553047 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 106129 8048 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58028490379 35.907 3 0.2207889908948515 0.00039635354736424893 0.0005918204076068893 ['ENSG00000168090|ENST00000303904|COPS6'] 78555 17541 NYQGHFHLF True PC9_epitope_Rep3 1161.5355774032498 1161.5344899358602 72.656 2 0.22077999682722887 0.00039635354736424893 0.0005919428179108148 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 141657 9380 YTSYPM[Oxidation]HDFY True H1975_Epitope_Rep3 1338.5226897111402 1338.5215899358602 41.08 2 0.22076544684812957 0.00039635354736424893 0.0005921408986076098 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 48369 7290 IYTGKENYEY True H1975_Epitope_Rep2 1278.57683307854 1278.5757299358602 32.979 2 0.22076291769261364 0.00039635354736424893 0.0005921753368426274 ['nc|ENSG00000163638|Q9P2N4-4|ADAMTS9', 'ENSG00000163638|ENST00000498707|ADAMTS9'] 5424 8533 ALTPDETYVPK True H1975_Epitope_Rep3 1232.6288686514001 1232.6277699358602 37.809 2 0.22076072676907718 0.00039635354736424893 0.0005922051711678432 ['CON__P02769'] 67938 10991 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 47.241 2 0.22075493382062886 0.00039635354736424893 0.0005922840623860352 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 14012 18978 DRFFSEYEKL True PC9_epitope_Rep1 1332.6350166609998 1332.6339099358602 77.784 2 0.220749983842116 0.00039635354736424893 0.0005923514819803287 ['ENSG00000135932|ENST00000258418|CAB39'] 140788 8005 YSDKYFDEHY True H1975_Epitope_Rep1 1365.55134660669 1365.5502499358602 35.735 2 0.22074621808460107 0.00039635354736424893 0.0005924027774296872 ['ENSG00000123975|ENST00000314355|CKS2'] 71070 15264 LYLDEAHSI True PC9_epitope_Rep2 1059.52367530687 1059.52256993586 63.99 2 0.22073479251723804 0.00039635354736424893 0.0005925584386292498 ['ENSG00000100596|ENST00000216484|SPTLC2'] 109758 8938 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.4816749679301 39.339 1 0.22073182779628794 0.00039635354736424893 0.0005925988365036903 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 49489 11634 KFDQLLAEEK True PC9_epitope_Rep5 1219.6448530687096 1219.64320490379 49.745 3 0.2207028202085445 0.00039635354736424893 0.0005929942454567575 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 26269 21094 FHFQDQQILTL True PC9_epitope_Rep1 1388.7088503075997 1388.7077499358602 85.968 2 0.22069831589293382 0.00039635354736424893 0.0005930556685362473 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 24346 18050 EYVVMTTHF True PC9_epitope_Rep5 1125.5164817514499 1125.5153899358602 74.444 2 0.22069787616190198 0.00039635354736424893 0.0005930616652684897 ['ENSG00000022355|ENST00000393943|GABRA1', 'ENSG00000011677|ENST00000370314|GABRA3'] 6813 12426 AQEYEALLNIK True H1975_Epitope_Rep1 1290.6819668534197 1290.68086993586 52.833 2 0.22069657286739292 0.00039635354736424893 0.0005930794390092358 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 121774 17612 VFNPYTEFK True PC9_epitope_Rep1 1143.5600608155898 1143.5589699358602 72.537 2 0.2206788470037219 0.00039635354736424893 0.000593321229390993 ['ENSG00000142634|ENST00000375980|EFHD2'] 74767 18225 NHDFQALAL True PC9_epitope_Rep3 1027.50869394907 1027.50758993586 75.315 2 0.22066091076724342 0.00039635354736424893 0.0005935659900463691 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 1330 7212 AEDVLSGKVSA True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 32.754 2 0.2206506764826994 0.00039635354736424893 0.0005937056940680436 ['ENSG00000175390|ENST00000651655|EIF3F'] 77513 10813 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4603699358602 46.556 2 0.2206457025681889 0.00039635354736424893 0.0005937736028484791 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 44103 7089 IINNTENLVR True H1975_Epitope_Rep3 1184.65133543148 1184.6502299358601 32.235 2 0.22063948561087726 0.00039635354736424893 0.0005938584938324189 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 48405 15664 IYVHDLLTF True NCI_RA007_Epitope_Rep4 1119.59644632431 1119.5953499358602 68.038 2 0.22063857510569118 0.00039635354736424893 0.0005938709275733658 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 135141 9169 WEIENNPTVKA True H1975_Epitope_Rep1 1299.6459156978701 1299.6448099358602 40.173 2 0.22062934700862025 0.00039635354736424893 0.0005939969600125137 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 113911 5131 TNRPPLSLSR True NCI_RA007_Epitope_Rep5 1139.64110510095 1139.63944490379 26.431 3 0.2206219215861264 0.00039635354736424893 0.0005940983919665348 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 118220 22860 TYLDIFRDF True PC9_epitope_Rep1 1188.5815245361598 1188.5804299358601 92.725 2 0.2206153613551883 0.00039635354736424893 0.0005941880197838165 ['ENSG00000072818|ENST00000158762|ACAP1'] 35404 10567 GSDFYSMHY True H1975_Epitope_Rep2 1105.41749598617 1105.41638993586 45.668 2 0.2206106716750485 0.00039635354736424893 0.0005942520998981233 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 25405 11728 FEDENFILK True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 50.252 2 0.22060809083886693 0.00039635354736424893 0.0005942873675804062 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 8784 7299 AVDPEDDFQR True NCI_RA007_Epitope_Rep5 1190.5203808315798 1190.5192899358601 34.753 2 0.22060274275848524 0.00039635354736424893 0.0005943604569358768 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 34935 5188 GQNPTNAEVLK True NCI_RA007_Epitope_Rep4 1169.6040508858898 1169.6029499358601 26.486 2 0.2205939894477485 0.00039635354736424893 0.0005944801032163534 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 97748 11270 SEIPKLPAV True NCI_RA007_Epitope_Rep4 952.5593325395998 952.55822993586 50.243 2 0.2205798765750797 0.00039635354736424893 0.0005946730585743767 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 111633 15997 TIDQLYLEY True H1975_Epitope_Rep2 1156.5652057656798 1156.56467496793 66.732 1 0.2205525930952783 0.00039635354736424893 0.000595046264547518 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 97396 9316 SEDSRFITV True H1975_Epitope_Rep3 1052.51383889916 1052.51274993586 40.829 2 0.22055089979781722 0.00039635354736424893 0.0005950694346125603 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'PTPRG|p.F707L|1|0.16|ENSG00000144724|chr3:62203914-62203914|T/C|missense_variant'] 5545 12249 AMLDTVVFK True NCI_RA007_Epitope_Rep4 1022.54705360374 1022.54594993586 54.114 2 0.22054405852261724 0.00039635354736424893 0.0005951630557291188 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 23681 17564 EYDLIVHQL True PC9_epitope_Rep6 1128.58152453616 1128.5804299358601 80.2 2 0.22054290331418883 0.00039635354736424893 0.0005951788659219675 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 46940 19122 ITPDEFHFV True PC9_epitope_Rep4 1103.5287606873098 1103.52766993586 81.646 2 0.2205360615700114 0.00039635354736424893 0.0005952725107326567 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 71440 15962 LYTEKFEEF True PC9_epitope_Rep6 1204.5652057656796 1204.5641099358602 73.695 2 0.2205346858150636 0.00039635354736424893 0.0005952913428494329 ['ENSG00000084652|ENST00000373610|TXLNA'] 107449 5217 SVLTDPAKLKK True NCI_RA007_Epitope_Rep4 1198.7285231230196 1198.72687490379 26.601 3 0.22053279653145857 0.00039635354736424893 0.000595317205412891 ['ENSG00000115548|ENST00000312912|KDM3A', 'KDM3A|p.I669Wfs*37|1|0.17|ENSG00000115548|chr2:86477942-86477973|ATCTTCAACCTGCACTGGGTGTGTCCTCGGTG/-|frameshift_variant'] 38476 10930 HEQFIPIAA True H1975_Epitope_Rep1 1024.5341804209197 1024.53308993586 47.005 2 0.2205248059742449 0.00039635354736424893 0.0005954266012960915 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 44405 7123 ILGATIENSR True H1975_Epitope_Rep3 1072.58767254576 1072.58656993586 32.369 2 0.22051347348081252 0.00039635354736424893 0.0005955817850314354 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 15146 7004 EAAENSLVAYK True H1975_Epitope_Rep1 1193.5928174958497 1193.59172993586 31.976 2 0.2205097430190143 0.00039635354736424893 0.0005956328777238027 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE'] 14921 16941 DYDSVFHHL True PC9_epitope_Rep1 1131.4985231881901 1131.49742993586 69.986 2 0.22050749227557334 0.00039635354736424893 0.0005956637062065924 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'EPC1|p.S472L|1|0.26|ENSG00000120616|chr10:32285027-32285027|G/A|missense_variant', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 133926 19146 VYIKDLSSF True PC9_epitope_Rep3 1070.56481184286 1070.56370993586 78.865 2 0.2205049657504461 0.00039635354736424893 0.0005956983139845028 ['ENSG00000084731|ENST00000264712|KIF3C'] 127604 8349 VNWATTPSSQK True PC9_epitope_Rep5 1217.6040508858898 1217.6029499358601 37.055 2 0.22050297776775973 0.00039635354736424893 0.000595725546346366 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 16656 9260 EEQLQQIRAE True PC9_epitope_Rep3 1242.6204292260197 1242.6193299358602 40.563 2 0.22049306090039822 0.00039635354736424893 0.0005958614111177067 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 4225 11012 AIDEDVLRY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 47.318 2 0.22047877012212289 0.00039635354736424893 0.0005960572547808797 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 4623 6485 ALAAGGYDVEK True NCI_RA007_Epitope_Rep5 1092.54513902744 1092.5440499358601 31.611 2 0.2204716759976012 0.00039635354736424893 0.0005961544980589159 ['ENSG00000184357|ENST00000331442|H1-5'] 116350 7901 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51807496793 35.365 1 0.22047101347603598 0.00039635354736424893 0.0005961635804388184 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 85746 14363 QHDFQAPYL True PC9_epitope_Rep6 1117.5192586327698 1117.5181699358602 67.143 2 0.22046981925017922 0.00039635354736424893 0.0005961799522006193 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 140849 7009 YSDRETQLY True H1975_Epitope_Rep3 1173.53021723929 1173.52912993586 31.924 2 0.22046311835808816 0.00039635354736424893 0.0005962718237684276 ['MAP3K3|p.L439*|1|0.16|ENSG00000198909|chr17:63691202-63691202|C/-|frameshift_variant', 'MAP3K3|p.Y479Tfs*6|1|0.38|ENSG00000198909|chr17:63691821-63691821|C/-|frameshift_variant', 'MAP3K3|p.A510Pfs*25|1|0.22|ENSG00000198909|chr17:63692292-63692292|G/-|frameshift_variant', 'ENSG00000198909|ENST00000361733|MAP3K3', 'nc|ENSG00000198909|Q99759-2|MAP3K3', 'ENST00000577784.1_1_17:61765908-61766726:+|nuORF', 'ENST00000577839.1_1_17:61766126-61767181:+|nuORF'] 40829 9967 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 43.329 2 0.22046137087854445 0.00039635354736424893 0.0005962957846576547 ['ENSG00000146830|ENST00000678049|GIGYF1'] 142745 13055 YYQHIVTTL True PC9_epitope_Rep6 1136.5866099166 1136.58550993586 61.82 2 0.22045372698656157 0.00039635354736424893 0.0005964006066536285 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 103171 12969 SPIENIQRVA True PC9_epitope_Rep5 1125.6142216467701 1125.6131299358601 54.895 2 0.22044983493699696 0.00039635354736424893 0.0005964539860972355 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 35564 10928 GSYDPQQIFK True NCI_RA007_Epitope_Rep1 1181.57168812845 1181.5705899358602 46.501 2 0.22044627796672628 0.00039635354736424893 0.0005965027741221089 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 96277 7692 RYQTQPVTL True NCI_RA007_Epitope_Rep4 1104.5927579261997 1104.5916699358602 36.25 2 0.22044597255355516 0.00039635354736424893 0.0005965069634091153 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 12229 8103 DIIPNPQER True H1975_Epitope_Rep1 1080.5563724174801 1080.55526993586 36.114 2 0.22044124222314648 0.00039635354736424893 0.0005965718521069995 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 54046 9738 KVIDPATATSV True PC9_epitope_Rep4 1100.607739284 1100.60664993586 45.094 2 0.22043970226970205 0.00039635354736424893 0.0005965929780736094 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 71038 20493 LYIVHPTMF True PC9_epitope_Rep1 1119.57868808519 1119.57758993586 83.638 2 0.22042493804143698 0.00039635354736424893 0.0005967955603456061 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 74679 8653 NGQDLGVAFK True NCI_RA007_Epitope_Rep2 1047.5349086969097 1047.53380993586 38.305 2 0.22041839382095552 0.00039635354736424893 0.0005968853766883009 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 2580 4465 AEQVQPPRSP True H1975_Epitope_Rep3 1107.5672714543498 1107.5661699358602 22.294 2 0.22041733664245167 0.00039635354736424893 0.0005968998872375579 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 133497 21428 VWFRIPNQF True PC9_epitope_Rep1 1205.6345631685297 1205.6334699358601 87.261 2 0.22039416857272048 0.00039635354736424893 0.000597217974851112 ['ENSG00000013583|ENST00000014930|HEBP1'] 26165 20650 FHDDWISSI True PC9_epitope_Rep3 1118.5032742154601 1118.5021699358601 84.701 2 0.22038031269073213 0.00039635354736424893 0.0005974082914096452 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 137799 15028 YEQLMQLYSA True H1975_Epitope_Rep3 1244.57472490356 1244.57362993586 63.196 2 0.22037957225071783 0.00039635354736424893 0.0005974184633875747 ['ENSG00000115268|ENST00000592588|RPS15'] 66180 8638 LSERADWQY True H1975_Epitope_Rep1 1166.5356369729 1166.53452993586 38.155 2 0.22037682161402053 0.00039635354736424893 0.0005974562524618026 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 96054 18241 RYLQTLTTI True PC9_epitope_Rep1 1107.62880908175 1107.6277099358601 74.956 2 0.22037400969743612 0.00039635354736424893 0.0005974948858966532 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 26179 12282 FHDESTQVQL True PC9_epitope_Rep5 1202.5567663402999 1202.5556699358601 52.231 2 0.22037060505786418 0.00039635354736424893 0.0005975416662155606 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 54223 4784 KVYNGILEK True NCI_RA007_Epitope_Rep3 1062.6073453611798 1062.6062499358602 25.781 2 0.2203657337532091 0.00039635354736424893 0.0005976086051494633 ['ENSG00000109689|ENST00000467087|STIM2', 'STIM2|p.A667S|1|0.13|ENSG00000109689|chr4:27022754-27022754|G/T|missense_variant', 'ENST00000467011.5_1_4:27022655-27024615:+|nuORF', 'nc|ENSG00000109689|Q9P246-2|STIM2'] 53055 12787 KPNPNQIISV True PC9_epitope_Rep3 1108.62405805448 1108.62296993586 54.206 2 0.22035398839102135 0.00039635354736424893 0.0005977700347482404 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 133925 18421 VYIKDLSSF True PC9_epitope_Rep2 1070.56481184286 1070.56370993586 76.186 2 0.22034537683923558 0.00039635354736424893 0.0005978884206981562 ['ENSG00000084731|ENST00000264712|KIF3C'] 37711 10639 GVYSFQFNK True NCI_RA007_Epitope_Rep5 1088.52909504048 1088.5279899358602 47.56 2 0.2203402418839947 0.00039635354736424893 0.0005979590238811174 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000525031.2_1_12:94817522-94817669:-|nuORF'] 74206 7082 NEFNLESK True NCI_RA007_Epitope_Rep2 979.46107505031 979.45996993586 32.171 2 0.2203059748278003 0.00039635354736424893 0.0005984303937726074 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B', 'ENST00000598706.1_1_19:8455252-8465174:+|nuORF'] 134315 16355 VYNSEYYHF True PC9_epitope_Rep3 1220.5138388991602 1220.51274993586 68.044 2 0.22030412837412272 0.00039635354736424893 0.0005984558037561875 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 121413 10792 VEVTEFEDIK True NCI_RA007_Epitope_Rep4 1207.59723416995 1207.59612993586 48.36 2 0.2202898817860244 0.00039635354736424893 0.0005986518946686315 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 54622 11948 KYLDNPNAL True PC9_epitope_Rep5 1046.53965972418 1046.53856993586 50.955 2 0.22028952301842142 0.00039635354736424893 0.0005986568336000153 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 24264 18847 EYTDVLQKI True PC9_epitope_Rep1 1107.58119018299 1107.58008993586 77.28 2 0.2202874429959872 0.00039635354736424893 0.0005986854687862322 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 108306 20587 SYIRPEDIVNF True PC9_epitope_Rep5 1351.67721582615 1351.67610993586 84.235 2 0.22028039414185263 0.00039635354736424893 0.0005987825189459571 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 44431 12805 ILHENFTTV True PC9_epitope_Rep4 1072.55530978832 1072.5542099358602 57.115 2 0.22027278562874705 0.00039635354736424893 0.0005988872923275028 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 27009 11885 FLEQVHQLY True H1975_Epitope_Rep2 1175.59750895347 1175.59640993586 50.795 2 0.22027184734333463 0.00039635354736424893 0.0005989002143041921 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 138705 10357 YINPDLALEEK True H1975_Epitope_Rep3 1303.6659824361097 1303.6648899358602 44.893 2 0.22025726486847172 0.00039635354736424893 0.000599101078712708 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1', 'ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 43973 17206 IIEPSLRQL True PC9_epitope_Rep1 1067.6338944621898 1067.63278993586 71.002 2 0.2202523477403052 0.00039635354736424893 0.0005991688242947284 ['ENSG00000221983|ENST00000442744|UBA52'] 49486 10350 KFDQLLAEEK True PC9_epitope_Rep2 1219.6448530687096 1219.64320490379 45.136 3 0.22024888666430376 0.00039635354736424893 0.0005992165137720554 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 41980 9220 IDEPLEGSEDR True PC9_epitope_Rep3 1258.56772494682 1258.5666299358602 40.404 2 0.22023929378285165 0.00039635354736424893 0.0005993487120836711 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 78635 19658 NYTDIKDYL True PC9_epitope_Rep2 1143.54480467427 1143.54370993586 80.999 2 0.22023419949998996 0.00039635354736424893 0.0005994189276612272 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 31175 10594 GAYKYIQEL True H1975_Epitope_Rep1 1083.56006081559 1083.5589699358602 45.703 2 0.2202247295107685 0.00039635354736424893 0.000599549476457854 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 96234 14908 RYQDAIRVF True PC9_epitope_Rep5 1166.6196413803798 1166.61799490379 62.348 3 0.22022467987069308 0.00039635354736424893 0.0005995501608476343 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 93526 18657 RQLEEEGITFV True PC9_epitope_Rep1 1319.6721304457096 1319.6710299358601 76.552 2 0.22022422552977994 0.00039635354736424893 0.0005995564249010847 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 130903 5914 VTDDSPKYNY True H1975_Epitope_Rep3 1200.5298828861198 1200.52878993586 27.758 2 0.22022161137055513 0.00039635354736424893 0.0005995924679082906 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 132143 8805 VTVGVDGTLYK True NCI_RA007_Epitope_Rep3 1150.62338934814 1150.6222899358602 41.724 2 0.22021386797088824 0.00039635354736424893 0.0005996992436390673 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1', 'ENST00000447818.2_1_X:79827372-79827747:-|nuORF', 'ENSG00000159399|ENST00000290573|HK2'] 14306 7565 DSYDSYATHNE True PC9_epitope_Rep2 1300.48438924568 1300.48328993586 34.469 2 0.22020913047387466 0.00039635354736424893 0.0005997645796113639 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF'] 24877 14696 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 68.462 2 0.22020332666805092 0.00039635354736424893 0.0005998446310420458 ['ENSG00000204592|ENST00000376630|HLA-E'] 90228 6724 REEDLDAVEA True H1975_Epitope_Rep2 1145.52004647841 1145.51894993586 30.778 2 0.22019871858939785 0.00039635354736424893 0.0005999081975382332 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 26393 13929 FHWSGNEQM True PC9_epitope_Rep5 1134.45527847722 1134.45418993586 58.598 2 0.22018759510071256 0.00039635354736424893 0.0006000616692115129 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B'] 73236 13514 M[Oxidation]SDSYLPSYY True H1975_Epitope_Rep2 1240.4958062569601 1240.49470993586 57.117 2 0.22018236507808503 0.00039635354736424893 0.0006001338418717376 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 67993 11325 LTDFIREEY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 48.61 2 0.2201801570128037 0.00039635354736424893 0.0006001643150899325 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 133703 18543 VYAVIPAEKF True PC9_epitope_Rep3 1135.62774645259 1135.62664993586 76.545 2 0.2201731079559095 0.00039635354736424893 0.0006002616085859969 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 40327 12645 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5439899358599 53.948 2 0.22017147773308177 0.00039635354736424893 0.0006002841117325621 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 116284 12046 TTDLELIKY True H1975_Epitope_Rep2 1094.58594121026 1094.5848499358601 51.414 2 0.2201711414295167 0.00039635354736424893 0.0006002887540795967 ['ENSG00000164109|ENST00000296509|MAD2L1', 'nc|ENSG00000164109|Q13257-2|MAD2L1', 'ENST00000511295.1_1_4:120986776-120987958:-|nuORF'] 14431 8533 DTDYRSMEY True H1975_Epitope_Rep2 1178.4550036936998 1178.45390993586 37.777 2 0.2201612677479207 0.00039635354736424893 0.0006004250668063605 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 138573 9932 YIDEQFERY True H1975_Epitope_Rep1 1261.5615173675699 1261.5604299358602 43.139 2 0.22015845051863478 0.00039635354736424893 0.0006004639662209854 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 118627 11981 TYSPALNKMF True NCI_RA007_Epitope_Rep4 1170.5743309807401 1170.5732299358601 53.089 2 0.22015406314433228 0.00039635354736424893 0.0006005245507388372 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 72926 14367 MPWGDPNYRSA True PC9_epitope_Rep2 1292.5608061749201 1292.5597099358602 60.524 2 0.22014644625675517 0.00039635354736424893 0.0006006297456326669 ['ENSG00000124226|ENST00000244061|RNF114'] 93538 10788 RQLETLGQEKL True PC9_epitope_Rep1 1313.7303140281695 1313.72866490379 46.384 3 0.2201387612197122 0.00039635354736424893 0.0006007359004595464 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 54102 17458 KVLNELTQL True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 72.152 2 0.22013406506733757 0.00039635354736424893 0.0006008007785403344 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 118251 14384 TYLEKAIKI True PC9_epitope_Rep5 1077.6433965167298 1077.6422899358602 60.328 2 0.22012824927178887 0.00039635354736424893 0.0006008811344113756 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 97685 14085 SEIDLFNIR True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 59.504 2 0.2201264661532528 0.00039635354736424893 0.0006009057736208395 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 104303 20230 SQINKFLYL True PC9_epitope_Rep5 1124.62299542532 1124.62188993586 82.861 2 0.22012472398618088 0.00039635354736424893 0.0006009298479402738 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 73251 4490 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 22.384 2 0.22012325662087837 0.00039635354736424893 0.0006009501256332858 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 88950 3094 QVHPDTGISSK True NCI_RA007_Epitope_Rep5 1167.5884008217502 1167.58675490379 17.128 3 0.22011853059588313 0.00039635354736424893 0.0006010154397929556 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 20060 4667 EM[Oxidation]EAELEDER True H1975_Epitope_Rep3 1265.5081618458098 1265.50706993586 23.075 2 0.22011823760397323 0.00039635354736424893 0.0006010194892062535 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 9650 20262 AYDTVRWEF True PC9_epitope_Rep5 1185.5454733806098 1185.54436993586 82.987 2 0.22010230257095778 0.00039635354736424893 0.0006012397670179543 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 23061 7928 EVIEIM[Oxidation]TDR True NCI_RA007_Epitope_Rep1 1120.54342515572 1120.5423299358602 34.831 2 0.2201008688450794 0.00039635354736424893 0.0006012595900886803 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 129215 6819 VQTEVNREL True PC9_epitope_Rep4 1086.56693710118 1086.5658499358601 33.445 2 0.22009371387289883 0.00039635354736424893 0.0006013585264168448 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 19766 16994 ELSDFISYLQR True NCI_RA007_Epitope_Rep2 1369.68778050985 1369.6866899358602 70.839 2 0.22009162678138838 0.00039635354736424893 0.0006013873890291327 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 134142 20078 VYLDKFIRL True PC9_epitope_Rep5 1165.68593003505 1165.68482993586 82.28 2 0.22005767900126905 0.00039635354736424893 0.0006018570517415045 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 70185 16777 LVQAFQFTDK True PC9_epitope_Rep3 1195.62372370131 1195.62262993586 69.678 2 0.22005696550725462 0.00039635354736424893 0.0006018669267775283 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 4494 14527 AIYDHINEGV True PC9_epitope_Rep5 1129.54038800017 1129.53928993586 60.876 2 0.22004993102220347 0.00039635354736424893 0.000601964295503157 ['nc|ENSG00000184076|Q9UDW1-2|UQCR10'] 23001 9517 EVFEDAAEIR True H1975_Epitope_Rep1 1177.5615173675699 1177.5604299358602 41.529 2 0.22003718490216848 0.00039635354736424893 0.0006021407628220837 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 70855 17584 LYDPVISKL True PC9_epitope_Rep4 1046.6011973515801 1046.60010993586 75.652 2 0.22002336864876687 0.00039635354736424893 0.0006023321045361513 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 92718 4802 RNVSTGDVNVE True H1975_Epitope_Rep3 1188.5734790335998 1188.5723899358602 23.598 2 0.22002281517597613 0.00039635354736424893 0.0006023397708684683 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 134236 14195 VYMELSQKL True PC9_epitope_Rep6 1109.57908200801 1109.5779899358602 66.485 2 0.2200057197230354 0.00039635354736424893 0.0006025766137888222 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 54721 20201 KYMDINFDF True PC9_epitope_Rep4 1191.52704643515 1191.5259499358601 85.841 2 0.21999924376273622 0.00039635354736424893 0.0006026663570964036 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 41447 20075 HYINMPVQF True PC9_epitope_Rep5 1147.5484505860697 1147.5473499358602 82.271 2 0.2199984237375285 0.00039635354736424893 0.000602677721892604 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF', 'ENST00000513183.1_1_18:13124610-13124766:+|nuORF', 'ENST00000510237.5_1_18:13103579-13124766:+|nuORF'] 90964 6419 REYWNEQSA True NCI_RA007_Epitope_Rep3 1181.51015050105 1181.50904993586 32.263 2 0.21999764619603815 0.00039635354736424893 0.0006026884981021143 ['ENSG00000065308|ENST00000182527|TRAM2'] 9081 8813 AVIGADSVTLK True NCI_RA007_Epitope_Rep4 1072.61282466444 1072.61172993586 40.709 2 0.21999020022890525 0.00039635354736424893 0.000602791704060649 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 10167 20963 AYVLNIVRF True PC9_epitope_Rep5 1093.62841515893 1093.62730993586 85.694 2 0.21998487271542 0.00039635354736424893 0.000602865557753177 ['ATP1B1|p.K203Efs*3|1|0.39|ENSG00000143153|chr1:169130047-169130048|-/G|frameshift_variant', 'nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 129135 14525 VQQTVQDLFGR True PC9_epitope_Rep6 1289.67279915205 1289.67170993586 67.76 2 0.21998017996975197 0.00039635354736424893 0.0006029306193740781 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 9653 6170 AYEAELGDAR True H1975_Epitope_Rep3 1093.50400249145 1093.50290993586 28.745 2 0.2199755226777439 0.00039635354736424893 0.000602995196420408 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 106451 20028 STIRLLTSL True PC9_epitope_Rep1 1002.60734536118 1002.60624993586 81.865 2 0.21995675927062722 0.00039635354736424893 0.0006032554362461959 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 142705 9143 YYQDTPKQI True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 40.114 2 0.21994858637955725 0.00039635354736424893 0.0006033688257164877 ['ENSG00000048162|ENST00000614830|NOP16'] 44787 20096 IMLEALERV True PC9_epitope_Rep5 1072.59506642532 1072.59396993586 82.346 2 0.21993781057118736 0.00039635354736424893 0.0006035183603587181 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 97903 5747 SEM[Oxidation]EVQDAELK True NCI_RA007_Epitope_Rep2 1293.5758474828096 1293.5747499358602 26.972 2 0.21992841183909326 0.00039635354736424893 0.0006036488158331839 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF', 'ENST00000418595.1_1_6:112937907-112938114:-|nuORF'] 9119 15408 AVIVLVENFYK True NCI_RA007_Epitope_Rep1 1293.7332741502898 1293.7321699358602 64.013 2 0.21992046159910802 0.00039635354736424893 0.0006037591881607979 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 142402 18907 YYEYNHDLF True PC9_epitope_Rep1 1262.5244035828598 1262.5233099358602 77.511 2 0.21991354815075503 0.00039635354736424893 0.000603855183281359 ['ENSG00000151748|ENST00000324679|SAV1'] 106187 8257 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 36.712 2 0.2199065402040731 0.00039635354736424893 0.0006039525061667296 ['ENSG00000114315|ENST00000232424|HES1'] 38399 7426 HEMFPAVHA True H1975_Epitope_Rep3 1037.4752856458097 1037.47418993586 33.542 2 0.21990584594364124 0.00039635354736424893 0.0006039621485678034 ['ENSG00000113638|ENST00000337702|TTC33'] 72303 9655 MIEPRTLQY True H1975_Epitope_Rep2 1149.58523001761 1149.5841299358601 42.118 2 0.21990447683027392 0.00039635354736424893 0.0006039811642769834 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 47899 12628 IYIKHPHLF True PC9_epitope_Rep2 1166.66004964038 1166.6584049037901 53.883 3 0.21989967105738953 0.00039635354736424893 0.0006040479167404219 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 118076 20234 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 82.659 2 0.2198878906638553 0.00039635354736424893 0.0006042115784027105 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 116338 7834 TTEVHPELY True H1975_Epitope_Rep1 1087.5185899264297 1087.51748993586 35.086 2 0.21988647961603405 0.00039635354736424893 0.0006042311846729692 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 69509 16274 LVAVELEKV True PC9_epitope_Rep5 998.6011973515799 998.60010993586 67.591 2 0.2198706747183247 0.00039635354736424893 0.0006044508346705679 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 96246 13948 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.6020249037902 58.928 3 0.2198492192019228 0.00039635354736424893 0.0006047491428606205 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 37756 20485 GWYDEEHPLVF True PC9_epitope_Rep4 1390.6193665968601 1390.61826993586 86.944 2 0.21983613422203796 0.00039635354736424893 0.0006049311432528625 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 14766 7439 DVNQQEFVR True NCI_RA007_Epitope_Rep1 1133.5465360097699 1133.54542993586 32.934 2 0.21983354913570752 0.00039635354736424893 0.0006049671059973837 ['ENSG00000105372|ENST00000598742|RPS19'] 98357 7388 SEYLRYEDT True H1975_Epitope_Rep2 1174.51423282198 1174.5131299358602 33.359 2 0.21983075927892956 0.00039635354736424893 0.0006050059198378012 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 24871 16465 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 71.301 2 0.21982587259586991 0.00039635354736424893 0.0006050739117636621 ['ENSG00000204592|ENST00000376630|HLA-E'] 65822 6654 LSDKNIEQY True H1975_Epitope_Rep3 1108.540053647 1108.53894993586 30.547 2 0.2198119337798454 0.00039635354736424893 0.0006052678946341317 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 74447 7581 NEVENQILTR True H1975_Epitope_Rep1 1214.6255146064598 1214.62440993586 34.153 2 0.2197929339462526 0.00039635354736424893 0.0006055324108683232 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 96281 10084 RYQTQPVTL True PC9_epitope_Rep2 1104.5927579261997 1104.5916699358602 44.118 2 0.2197904623325649 0.00039635354736424893 0.0006055668292703772 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 108795 17723 SYTRLFSNF True PC9_epitope_Rep6 1133.5505587610498 1133.54946993586 80.805 2 0.21977731118583851 0.00039635354736424893 0.0006057499982868441 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 2302 7226 AENYDIPSADR True NCI_RA007_Epitope_Rep2 1249.55749461629 1249.5563899358601 32.726 2 0.21977717414728326 0.00039635354736424893 0.0006057519072508495 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 7033 6261 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep2 935.4348606187698 935.43431496793 28.958 1 0.2197703096198787 0.00039635354736424893 0.0006058475386902935 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 32148 9037 GEVFKTYNV True H1975_Epitope_Rep3 1055.5287606873098 1055.52766993586 39.748 2 0.21976753039951133 0.00039635354736424893 0.0006058862610087727 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 90573 7506 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 33.822 2 0.21975665007484416 0.00039635354736424893 0.0006060378782761763 ['ENSG00000026025|ENST00000544301|VIM'] 116270 12135 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.4974899358601 51.761 2 0.219753350688783 0.00039635354736424893 0.0006060838627256276 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 72210 16308 MHAETAFESL True PC9_epitope_Rep5 1134.5015599633 1134.50046993586 67.725 2 0.21973280099688544 0.00039635354736424893 0.0006063703482412869 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 111974 4062 TIQSGEQPYK True NCI_RA007_Epitope_Rep5 1149.56660274801 1149.56550993586 22.069 2 0.21973138280705673 0.00039635354736424893 0.0006063901243930393 ['ENSG00000168653|ENST00000372969|NDUFS5'] 98425 7482 SFETTEESLR True H1975_Epitope_Rep1 1197.55134660669 1197.5502499358602 33.778 2 0.21972834110161282 0.00039635354736424893 0.0006064325420739693 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 2379 11501 AEQDLIREL True H1975_Epitope_Rep3 1085.57168812845 1085.5705899358602 49.363 2 0.21972005576644665 0.00039635354736424893 0.0006065480991653119 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 137893 9389 YEVRLTQTV True H1975_Epitope_Rep2 1107.59242357303 1107.5913299358601 41.078 2 0.2197148529109188 0.00039635354736424893 0.0006066206756399125 ['ENSG00000187608|ENST00000649529|ISG15'] 84914 12216 QEDKPSPLLF True H1975_Epitope_Rep2 1172.607739284 1172.60664993586 52.071 2 0.2197141003165274 0.00039635354736424893 0.0006066311745669769 ['ENSG00000112144|ENST00000676107|CILK1'] 134840 19767 VYVDLGGSHVF True PC9_epitope_Rep3 1191.5924235730301 1191.5913299358601 81.262 2 0.2197080532243143 0.00039635354736424893 0.000606715540012144 ['ENSG00000165733|ENST00000374518|BMS1'] 27670 9950 FPGQLNADLR True H1975_Epitope_Rep3 1129.5880068989297 1129.5869099358601 43.306 2 0.2197022960082823 0.00039635354736424893 0.0006067958722161301 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 74003 14273 NDEELNKLLGK True PC9_epitope_Rep1 1271.6721304457099 1271.6710299358601 59.725 2 0.21969729135429955 0.00039635354736424893 0.0006068657123614563 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 107526 17471 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 71.998 2 0.21969599328679118 0.00039635354736424893 0.0006068838282623864 ['ENSG00000073756|ENST00000367468|PTGS2'] 97921 5486 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 26.116 2 0.21968813184365035 0.00039635354736424893 0.0006069935545862605 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 34106 7888 GM[Oxidation]DVELTVEER True H1975_Epitope_Rep3 1292.59183190012 1292.59072993586 35.317 2 0.21968237775879176 0.00039635354736424893 0.0006070738800116439 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 116342 7780 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51807496793 34.872 1 0.21965940912463347 0.00039635354736424893 0.0006073946220328416 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 118482 14216 TYPQLEGFKF True NCI_RA007_Epitope_Rep3 1228.6128246644396 1228.61172993586 63.226 2 0.2196571672160978 0.00039635354736424893 0.0006074259379325667 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 68375 9244 LTEQRALLY True H1975_Epitope_Rep2 1105.6131590176099 1105.61206993586 40.514 2 0.2196452248712619 0.00039635354736424893 0.0006075927808141324 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2', 'TECPR2|p.N1004Efs*17|1|0.25|ENSG00000196663|chr14:102445878-102445879|-/G|frameshift_variant'] 73495 11959 MVDPLLTKY True H1975_Epitope_Rep1 1078.57326835158 1078.57216993586 51.005 2 0.2196376654853853 0.00039635354736424893 0.0006076984144679531 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 106392 8885 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.5913299358601 40.839 2 0.21963430302234924 0.00039635354736424893 0.0006077454069116147 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 2132 11466 AELNEFLTR True NCI_RA007_Epitope_Rep1 1091.56112344475 1091.56002993586 48.566 2 0.2196267014252222 0.00039635354736424893 0.0006078516572435395 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 141299 7100 YTDQFSRNY True H1975_Epitope_Rep1 1192.51490152832 1192.51380993586 32.335 2 0.2196009517119047 0.00039635354736424893 0.0006082117090195463 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 11734 6442 DHASIQM[Oxidation]NV True PC9_epitope_Rep5 1029.45494450449 1029.45384993586 29.753 2 0.2195752874987756 0.00039635354736424893 0.0006085707781934981 ['ENSG00000171858|ENST00000343986|RPS21'] 49054 6559 KEHEEFQITA True H1975_Epitope_Rep2 1230.5880664685799 1230.58642490379 30.141 3 0.21956518017993915 0.00039635354736424893 0.0006087122485225941 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 104731 14640 SQVEILQRV True PC9_epitope_Rep1 1070.6084079903399 1070.60730993586 61.135 2 0.21956151579234776 0.00039635354736424893 0.0006087635464483306 ['ENSG00000117318|ENST00000374561|ID3'] 67933 11842 LTDDDLLRY True H1975_Epitope_Rep3 1122.55570371114 1122.55460993586 50.697 2 0.21955863785749447 0.00039635354736424893 0.0006088038378280913 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 26839 11409 FLDASGAKLDY True H1975_Epitope_Rep2 1198.5870038394198 1198.5859099358602 48.934 2 0.21955266020925 0.00039635354736424893 0.0006088875340603554 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 39061 11487 HHSNIPMSL True PC9_epitope_Rep5 1034.49674936638 1034.49564993586 49.182 2 0.2195441049493052 0.00039635354736424893 0.0006090073408912062 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61417336-61434009:-|nuORF'] 118527 14057 TYQDIQNTI True PC9_epitope_Rep6 1094.52440358286 1094.5233099358602 65.944 2 0.219542021117161 0.00039635354736424893 0.0006090365262079081 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 115171 7785 TRDPQFQKL True PC9_epitope_Rep1 1131.6036569630699 1131.6020249037902 34.768 3 0.21953411221235294 0.00039635354736424893 0.0006091473079257646 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 24052 15725 EYNNNFHVL True PC9_epitope_Rep5 1148.5250722892001 1148.5239699358601 65.481 2 0.2195308128119018 0.00039635354736424893 0.0006091935293087216 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 70891 18921 LYEKDIQLF True PC9_epitope_Rep4 1167.6175756917098 1167.61646993586 80.866 2 0.21952960538102953 0.00039635354736424893 0.0006092104451173642 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 4779 17296 ALDTM[Oxidation]NFDVIK True PC9_epitope_Rep1 1281.62748913285 1281.62638993586 71.345 2 0.21950841190263054 0.00039635354736424893 0.0006095074372700555 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 138505 12516 YHSEVPVSL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 59.573 2 0.21950707484451623 0.00039635354736424893 0.0006095261788371801 ['ENSG00000115306|ENST00000356805|SPTBN1'] 28110 20565 FQYESKVFYL True PC9_epitope_Rep5 1322.6546894764197 1322.65358993586 84.148 2 0.21950179982233953 0.00039635354736424893 0.0006096001245566672 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 53190 6308 KQEELEAALQR True H1975_Epitope_Rep3 1313.6939285194496 1313.6928299358601 29.268 2 0.21947817017672291 0.00039635354736424893 0.0006099314774682759 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 65351 9913 LRDLEDSLAR True PC9_epitope_Rep2 1186.6305999868998 1186.6289549037901 43.463 3 0.21946647820058401 0.00039635354736424893 0.0006100954980999653 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 72933 15129 MPWGDPNYRSA True PC9_epitope_Rep5 1292.5608061749201 1292.5597099358602 63.199 2 0.21946273330159657 0.00039635354736424893 0.0006101480426907218 ['ENSG00000124226|ENST00000244061|RNF114'] 58615 4653 LEQVESGLHRA True H1975_Epitope_Rep2 1237.64149902377 1237.6398449037902 22.996 3 0.21945582588565296 0.00039635354736424893 0.0006102449723953328 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000554514.1_1_14:21549058-21555515:+|nuORF', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 139070 10473 YLDDPDLKY True H1975_Epitope_Rep3 1140.5339056374 1140.53280993586 45.347 2 0.2194535584581225 0.00039635354736424893 0.0006102767938967413 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 135101 7107 WEEEAGRYAA True H1975_Epitope_Rep2 1180.5149015283198 1180.51380993586 32.267 2 0.21944308067406953 0.00039635354736424893 0.0006104238626993631 ['ENST00000529712.5_1_11:47736424-47736610:-|nuORF'] 34179 17371 GNFNYVEFTR True PC9_epitope_Rep5 1245.5778361380499 1245.5767299358602 71.819 2 0.21943170864132797 0.00039635354736424893 0.0006105835236441834 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 7161 5314 AQYEDIAQK True NCI_RA007_Epitope_Rep2 1064.5138388991597 1064.51274993586 25.292 2 0.21942815394921636 0.00039635354736424893 0.0006106334393681483 ['ENSG00000167768|ENST00000252244|KRT1'] 37825 10435 GYIERPQLI True NCI_RA007_Epitope_Rep3 1087.6025943339098 1087.6014899358602 48.111 2 0.2194280195447794 0.00039635354736424893 0.0006106353267834624 ['nc|ENSG00000164329|Q6PIY7-2|TENT2', 'ENSG00000164329|ENST00000453514|TENT2'] 42260 12543 IDTIEIITDR True NCI_RA007_Epitope_Rep2 1187.63976768827 1187.6386699358602 53.403 2 0.21942475594751573 0.00039635354736424893 0.0006106811586405208 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 14924 16826 DYDSVFHHL True PC9_epitope_Rep5 1131.4985231881901 1131.49742993586 69.731 2 0.21941787663699053 0.00039635354736424893 0.0006107777785508722 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'EPC1|p.S472L|1|0.26|ENSG00000120616|chr10:32285027-32285027|G/A|missense_variant', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 43364 8530 IGAEVYHNLK True PC9_epitope_Rep3 1142.60840799034 1142.6067749037902 37.766 3 0.2194126496222562 0.00039635354736424893 0.0006108512022229295 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 7151 6468 AQYEDIANR True PC9_epitope_Rep2 1078.5043368446197 1078.5032299358602 30.293 2 0.21940824156826377 0.00039635354736424893 0.0006109131288689357 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 10062 10757 AYSSYVHQY True PC9_epitope_Rep1 1116.48762415132 1116.48652993586 46.264 2 0.21940203595810293 0.00039635354736424893 0.0006110003191994596 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 64922 5000 LQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep2 1061.51754476105 1061.51644993586 24.072 2 0.21940147937508947 0.00039635354736424893 0.0006110081399361556 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 5487 7376 ALYDATYETK True H1975_Epitope_Rep1 1173.5553693579702 1173.55426993586 33.376 2 0.21939603194506033 0.00039635354736424893 0.0006110846889254999 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 24206 17281 EYRPEFSNF True PC9_epitope_Rep5 1187.5247379360299 1187.52364993586 71.479 2 0.21938024593196878 0.00039635354736424893 0.0006113065732663373 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 48280 10908 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65934993586 47.279 2 0.2193799574375839 0.00039635354736424893 0.00061131062902496 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 38288 6181 HEFDEQVAA True H1975_Epitope_Rep2 1044.4512386426 1044.45014993586 28.745 2 0.21937982219574378 0.00039635354736424893 0.0006113125303130597 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF'] 24440 10466 FADLSEAANR True PC9_epitope_Rep1 1092.5199869087598 1092.5188899358602 45.147 2 0.21937781357679337 0.00039635354736424893 0.0006113407690427674 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 137175 13790 YAYDGKDYL True PC9_epitope_Rep2 1106.4920408254197 1106.49094993586 58.328 2 0.2193741929968206 0.00039635354736424893 0.0006113916732820037 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 79997 18341 PFAKPLPTF True PC9_epitope_Rep5 1016.5695033004799 1016.56840993586 75.563 2 0.21937330031374463 0.00039635354736424893 0.0006114042247846442 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 69311 17957 LTVEERNLLSV True PC9_epitope_Rep4 1271.7085159544301 1271.7074099358601 77.126 2 0.2193676996672214 0.00039635354736424893 0.0006114829781497337 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 97720 8178 SEIESVKISA True H1975_Epitope_Rep3 1061.56045473841 1061.5593499358602 36.436 2 0.21936308434876725 0.00039635354736424893 0.0006115478839960171 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU'] 138295 6328 YHDEADQSAL True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 29.739 2 0.21933230915828075 0.00039635354736424893 0.0006119808564142084 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 89434 20807 QYEEQFVTL True PC9_epitope_Rep1 1155.5448046742697 1155.54370993586 84.861 2 0.2193314311761193 0.00039635354736424893 0.0006119932131501599 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 78568 8881 NYQNVVHKL True PC9_epitope_Rep1 1113.59309227937 1113.59198993586 38.999 2 0.21932977371005946 0.00039635354736424893 0.0006120165410382128 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ZMYM4|p.A664Ffs*28|1|0.06|ENSG00000146463|chr1:35387155-35387156|-/TTTCCTAGACAATATTGTTTAGT|frameshift_variant'] 24146 10692 EYQDLLNVK True NCI_RA007_Epitope_Rep2 1120.5764391557198 1120.57534993586 46.19 2 0.21930600047966023 0.00039635354736424893 0.0006123512338668272 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 133689 18393 VYAQVARLF True PC9_epitope_Rep4 1065.5971150306498 1065.5960099358601 78.813 2 0.21929946281167836 0.00039635354736424893 0.0006124433070038367 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 77797 10037 NTVELLVEDK True H1975_Epitope_Rep1 1158.6132185872598 1158.6121299358601 43.546 2 0.21929809452818994 0.00039635354736424893 0.0006124625789590998 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 38595 14218 HEYPWILSA True H1975_Epitope_Rep2 1114.54474510462 1114.54364993586 59.839 2 0.21929560295472403 0.00039635354736424893 0.0006124976737557395 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 4848 16602 ALELDSNLYR True PC9_epitope_Rep1 1192.60880191316 1192.6077099358602 68.684 2 0.2192917024271199 0.00039635354736424893 0.0006125526182799948 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 137064 11819 YAPELLYYANK True H1975_Epitope_Rep1 1343.6761531969898 1343.6750499358602 50.457 2 0.21928997128645325 0.00039635354736424893 0.0006125770054630577 ['CON__P02769'] 95941 10731 RYLEKPMEI True PC9_epitope_Rep4 1177.6165301458898 1177.6154299358602 49.032 2 0.21927391050463343 0.00039635354736424893 0.0006128033057546101 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 8427 8862 [Acetylation]-ATNFLAHEK True H1975_Epitope_Rep3 1071.53490901321 1071.53380993586 39.09 2 0.21926721002693048 0.00039635354736424893 0.0006128977418982125 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 97722 6696 SEIGAITRSA True H1975_Epitope_Rep2 1003.52982331647 1003.52872993586 30.666 2 0.21926529967427932 0.00039635354736424893 0.000612924668972495 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3'] 134733 8810 VYTSGVYHI True NCI_RA007_Epitope_Rep3 1037.51819600361 1037.5170899358602 41.745 2 0.2192612163555083 0.00039635354736424893 0.000612982228727992 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 134232 15739 VYMELSQKL True PC9_epitope_Rep2 1109.57908200801 1109.5779899358602 65.811 2 0.21926011023514894 0.00039635354736424893 0.0006129978218847065 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 107541 17374 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 71.829 2 0.2192539820152076 0.00039635354736424893 0.000613084219598465 ['ENSG00000073756|ENST00000367468|PTGS2'] 90779 6214 RESEGFEEHVP True H1975_Epitope_Rep2 1314.5840437173 1314.5824049037901 28.872 3 0.21925165227990212 0.00039635354736424893 0.0006131170681986666 ['ENSG00000119801|ENST00000261353|YPEL5'] 97110 4489 [Acetylation]-SDKPDM[Oxidation]AEIEK True H1975_Epitope_Rep3 1319.5914978632497 1319.59038993586 22.386 2 0.2192367848804764 0.00039635354736424893 0.0006133267358674857 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 35697 11023 GTFATLSELH True NCI_RA007_Epitope_Rep5 1074.53457434374 1074.53346993586 49.034 2 0.21923479049244246 0.00039635354736424893 0.000613354867219397 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 42462 10194 IEEDIRDLAA True H1975_Epitope_Rep1 1143.57716743171 1143.57606993586 44.151 2 0.21923303986624398 0.00039635354736424893 0.0006133795613154028 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 74043 9043 NDLAVVDVR True NCI_RA007_Epitope_Rep2 999.53490869691 999.53380993586 39.776 2 0.21922873652741004 0.00039635354736424893 0.0006134402678701107 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 77365 7795 NSELLNDRY True H1975_Epitope_Rep3 1122.53055159246 1122.5294499358602 34.966 2 0.21922436033255274 0.00039635354736424893 0.0006135020083761806 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14'] 137195 13007 YAYDGKDYLAL True NCI_RA007_Epitope_Rep1 1290.6132185872598 1290.6121299358601 54.586 2 0.21922334757378625 0.00039635354736424893 0.0006135162975311646 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 22278 12121 ETDEKDFYLY True H1975_Epitope_Rep3 1321.5714133449299 1321.57030993586 51.791 2 0.21919779431589045 0.00039635354736424893 0.0006138769425460638 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 9992 9258 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep4 1108.5011664209198 1108.5000699358602 42.462 2 0.21918574047640532 0.00039635354736424893 0.000614047137818035 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 47838 14400 IYHDLEQSI True PC9_epitope_Rep1 1116.54513902744 1116.5440499358601 60.213 2 0.21918102264671308 0.00039635354736424893 0.0006141137645302442 ['nc|ENSG00000100266|Q9UNF0-2|PACSIN2', 'ENSG00000100266|ENST00000263246|PACSIN2'] 24054 13486 EYNNNFHVL True PC9_epitope_Rep6 1148.5250722892001 1148.5239699358601 63.574 2 0.21916906953131696 0.00039635354736424893 0.0006142826027521418 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 28952 9417 FTDQQKLIY True H1975_Epitope_Rep3 1154.5971746002997 1154.5960699358602 41.225 2 0.21916894051661204 0.00039635354736424893 0.0006142844253439303 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 61989 20744 LLDPNVKSIFV True PC9_epitope_Rep1 1243.71762408615 1243.71652993586 84.62 2 0.2191624592990074 0.00039635354736424893 0.0006143759925411586 ['ENSG00000117419|ENST00000372257|ERI3', 'nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3'] 24078 11909 EYPDRIMNTF True NCI_RA007_Epitope_Rep3 1284.5808729131597 1284.5797699358602 53.977 2 0.21916225315589558 0.00039635354736424893 0.0006143789051734066 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 47993 20329 IYKPVTDFF True PC9_epitope_Rep3 1128.5855472874398 1128.5844499358602 83.445 2 0.21915430773015307 0.00039635354736424893 0.0006144911780486226 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000472420.5_1_2:44123526-44126707:-|nuORF'] 70789 17149 LYANM[Oxidation]FERL True PC9_epitope_Rep1 1171.56958033391 1171.56848993586 70.786 2 0.21914836347424482 0.00039635354736424893 0.0006145751868457525 ['ENSG00000004478|ENST00000001008|FKBP4'] 105615 9529 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4603699358602 41.661 2 0.219148238394919 0.00039635354736424893 0.0006145769546867907 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 27490 6448 FM[Oxidation]ETATESLAK True H1975_Epitope_Rep1 1242.58020458726 1242.57910993586 29.864 2 0.2191349477167925 0.00039635354736424893 0.0006147648310063346 ['CON__Q58D62'] 24159 6468 EYQELM[Oxidation]NVK True NCI_RA007_Epitope_Rep2 1168.5434251557197 1168.5423299358602 29.767 2 0.21911888032955174 0.00039635354736424893 0.0006149920356845989 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 90389 10378 REIDDYIVQA True H1975_Epitope_Rep1 1220.6037165327198 1220.60260993586 44.868 2 0.21910841624206379 0.00039635354736424893 0.0006151400508826954 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 138577 9915 YIDEQFERY True H1975_Epitope_Rep3 1261.5615173675699 1261.5604299358602 43.17 2 0.21910006393516834 0.00039635354736424893 0.0006152582204581899 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 129081 12000 VQPSKYHFL True PC9_epitope_Rep1 1117.5920296502102 1117.59092993586 51.02 2 0.21909344161323366 0.00039635354736424893 0.0006153519301597307 ['ENSG00000177383|ENST00000317897|MAGEF1'] 85744 16881 QHDFQAPYL True PC9_epitope_Rep3 1117.5192586327698 1117.5181699358602 70.089 2 0.21908800263013453 0.00039635354736424893 0.0006154289056405036 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 23087 16456 EVIKELAQI True PC9_epitope_Rep4 1041.6070110080097 1041.6059099358602 71.266 2 0.2190866062984259 0.00039635354736424893 0.000615448668853475 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 102489 12160 [Acetylation]-SLVIPEKFQH True H1975_Epitope_Rep1 1238.66592318276 1238.66482993586 51.791 2 0.2190800279234018 0.00039635354736424893 0.0006155417855452677 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 134506 15508 VYQHLFTRI True PC9_epitope_Rep3 1175.6451278522297 1175.64349490379 64.802 3 0.21907879368364785 0.00039635354736424893 0.0006155592577450472 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 140834 5755 YSDMREANY True H1975_Epitope_Rep2 1147.46042342731 1147.45932993586 27.133 2 0.2190703286390125 0.00039635354736424893 0.0006156791043980253 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 78686 20329 NYYKVNWTF True PC9_epitope_Rep5 1233.5818588893296 1233.5807699358602 83.233 2 0.21907013614872511 0.00039635354736424893 0.0006156818299147925 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 55044 17102 KYSNMEQSLF True PC9_epitope_Rep5 1245.5699738762899 1245.5688699358602 70.804 2 0.21906855205858805 0.00039635354736424893 0.0006157042598918355 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 134701 18683 VYTLLTTHL True PC9_epitope_Rep4 1059.5964463243101 1059.5953499358602 79.944 2 0.21906854205245418 0.00039635354736424893 0.000615704401576627 ['nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 91067 20687 RFLNDPGHLLW True PC9_epitope_Rep3 1366.7146043943799 1366.7135099358602 84.847 2 0.2190676742219267 0.00039635354736424893 0.0006157166900023417 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 11931 18635 DHMRFISEL True PC9_epitope_Rep3 1146.54917886206 1146.5480899358602 76.9 2 0.21906760019512903 0.00039635354736424893 0.0006157177382285339 ['ENSG00000273749|ENST00000617928|CYFIP1'] 8119 13918 ATEEAPYWTY True H1975_Epitope_Rep2 1229.5240692296898 1229.5229699358601 58.683 2 0.21906467921762862 0.00039635354736424893 0.0006157591009650623 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 17992 12350 EIDM[Oxidation]NDIKAFY True H1975_Epitope_Rep3 1373.6173183719698 1373.61622993586 52.69 2 0.2190580580879023 0.00039635354736424893 0.0006158528703272902 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 49992 19833 KIVPVEITI True PC9_epitope_Rep5 1010.6375828603 1010.63648993586 81.335 2 0.21904586198155682 0.00039635354736424893 0.0006160256307893354 ['ENST00000371870.3_1_1:47799617-47838812:+|nuORF', 'nc|ENSG00000162368|P30085|CMPK1', 'ENSG00000162368|ENST00000371873|CMPK1'] 7185 10978 AQYEHDLEV True PC9_epitope_Rep2 1102.4931034545798 1102.49200993586 47.549 2 0.2190435584195917 0.00039635354736424893 0.0006160582666977914 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 88643 10464 QTELSQLLK True H1975_Epitope_Rep1 1058.5971746003 1058.5960699358602 45.204 2 0.21903172953023742 0.00039635354736424893 0.000616225880814257 ['ENST00000380591.7_1_5:72801034-72801127:+|nuORF'] 72118 17989 M[Oxidation]FLSFPTTK True PC9_epitope_Rep3 1086.54196860374 1086.5408699358602 74.399 2 0.21902968685817784 0.00039635354736424893 0.0006162548298949365 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 111375 11799 THSDAFRVSL True PC9_epitope_Rep2 1131.56727145435 1131.56563490379 50.717 3 0.21902243540921995 0.00039635354736424893 0.0006163576096298912 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1', 'ALPK1|p.D797Gfs*8|1|0.09|ENSG00000073331|chr4:112431936-112431937|-/GATGTGTGCCT|frameshift_variant'] 94942 13241 RTIFPLFMK True NCI_RA007_Epitope_Rep4 1151.6525217317899 1151.65142993586 58.063 2 0.21901610939824598 0.00039635354736424893 0.0006164472865476785 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000473857.5_1_20:36384780-36460672:+|nuORF', 'nc|ENSG00000132792|Q8WYA6-3|CTNNBL1', 'nc|ENSG00000132792|Q8WYA6-2|CTNNBL1'] 85869 17977 QHFDSVMQL True PC9_epitope_Rep3 1103.5069796969099 1103.50588993586 74.352 2 0.21900700156387817 0.00039635354736424893 0.0006165764213171782 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 98424 6965 SFETTDESLR True NCI_RA007_Epitope_Rep4 1183.5356965425499 1183.5345899358601 33.416 2 0.21899524808656606 0.00039635354736424893 0.0006167431072586286 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000484852.1_1_3:147884522-147885023:-|nuORF', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 11496 6785 DFHVDEQTTVK True NCI_RA007_Epitope_Rep2 1317.62009487285 1317.61898993586 31.008 2 0.21898708084442858 0.00039635354736424893 0.000616858960408898 ['CON__P34955'] 54883 10972 KYPKVWEGF True NCI_RA007_Epitope_Rep4 1152.59678067748 1152.59568993586 49.071 2 0.2189793937787069 0.00039635354736424893 0.000616968022156437 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 75109 11454 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56036993586 51.822 2 0.2189736492870478 0.00039635354736424893 0.0006170495358858432 ['ENSG00000171223|ENST00000302754|JUNB'] 43198 21034 IFIDPGYQTF True PC9_epitope_Rep4 1199.58627556343 1199.5851699358602 89.07 2 0.21895779104597476 0.00039635354736424893 0.0006172746187454521 ['ENSG00000121741|ENST00000610343|ZMYM2'] 40828 9872 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 42.96 2 0.21895689457201625 0.00039635354736424893 0.0006172873452471095 ['ENSG00000146830|ENST00000678049|GIGYF1'] 53383 19873 KQVEDDIQQLL True PC9_epitope_Rep1 1327.6983451935498 1327.69724993586 81.259 2 0.21895356864647295 0.00039635354736424893 0.000617334562970118 ['ENSG00000161057|ENST00000292644|PSMC2', 'ENST00000460021.1_1_7:102994369-103002536:+|nuORF'] 69844 7481 LVHELDEAEYR True NCI_RA007_Epitope_Rep1 1372.6622940379998 1372.6606349037902 33.091 3 0.21895094073625315 0.00039635354736424893 0.0006173718736252435 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1'] 86337 21277 QIYDIFQKL True PC9_epitope_Rep5 1166.6335601090198 1166.6324699358602 86.895 2 0.21894493919192415 0.00039635354736424893 0.0006174570910899943 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 35618 9756 GTDDGRLLEY True H1975_Epitope_Rep3 1137.5302172392899 1137.52912993586 42.549 2 0.21894436325236022 0.00039635354736424893 0.000617465269623978 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 92591 5248 RMQKEITAL True NCI_RA007_Epitope_Rep5 1088.60121443492 1088.60010993586 26.883 2 0.21893142737928625 0.00039635354736424893 0.0006176489919779429 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48033 20606 IYLPYLHEW True PC9_epitope_Rep4 1232.62299542532 1232.62188993586 87.415 2 0.21893084194911214 0.00039635354736424893 0.0006176573078750893 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 95885 6805 RYLDKTEQW True NCI_RA007_Epitope_Rep3 1237.6091362663299 1237.60802993586 33.873 2 0.21893027877842902 0.00039635354736424893 0.0006176653076874447 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 134421 13875 VYPLMKEYF True NCI_RA007_Epitope_Rep3 1188.5889184157197 1188.58782993586 61.901 2 0.21890864266249738 0.00039635354736424893 0.0006179727264016079 ['ENSG00000100109|ENST00000407690|TFIP11'] 1470 10929 AEEIAGKWLQA True H1975_Epitope_Rep1 1214.62953735774 1214.62844993586 47.001 2 0.21890425743819664 0.00039635354736424893 0.0006180350529672785 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 24436 7634 FADLSEAANR True NCI_RA007_Epitope_Rep2 1092.5199869087598 1092.5188899358602 34.319 2 0.2189029010795886 0.00039635354736424893 0.0006180543319752339 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 45891 10892 ISDSYFPRY True H1975_Epitope_Rep3 1146.53457434374 1146.53346993586 46.981 2 0.21888894051169408 0.00039635354736424893 0.0006182527997459121 ['ENSG00000135862|ENST00000258341|LAMC1', 'LAMC1|p.V549L|1|0.31|ENSG00000135862|chr1:183117400-183117400|G/T|missense_variant'] 55007 10703 KYQKGFSLW True NCI_RA007_Epitope_Rep1 1155.6076797143498 1155.60658993586 45.623 2 0.21888393964133313 0.00039635354736424893 0.0006183239092275682 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 73799 18240 NAIDRLVNI True PC9_epitope_Rep4 1026.5821932425 1026.58108993586 78.229 2 0.21887507745307513 0.00039635354736424893 0.000618449944572267 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 133774 13480 VYERELQTF True PC9_epitope_Rep2 1183.5873381925899 1183.58624993586 57.136 2 0.21887096221581584 0.00039635354736424893 0.0006185084789879988 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 89055 9010 QVLSAATIVAK True NCI_RA007_Epitope_Rep4 1099.6601092100298 1099.65900993586 41.491 2 0.21886746091963658 0.00039635354736424893 0.0006185582851897533 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant'] 84911 11529 QEDFFQRVP True H1975_Epitope_Rep2 1164.55637241748 1164.55526993586 49.406 2 0.21886700012035307 0.00039635354736424893 0.0006185648403939082 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 111433 20034 THSQFIVVSL True PC9_epitope_Rep1 1129.6131590176099 1129.61206993586 81.888 2 0.21885437852324482 0.00039635354736424893 0.0006187444188753167 ['ENSG00000136824|ENST00000374793|SMC2'] 30182 17310 FYQPKIQQF True PC9_epitope_Rep1 1197.61824439805 1197.6171499358602 71.399 2 0.21885254204194823 0.00039635354736424893 0.0006187705524570794 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 14401 10607 DTDHYFLRY True H1975_Epitope_Rep2 1228.5512870370399 1228.5496349037899 45.823 3 0.2188493147544996 0.00039635354736424893 0.000618816480236637 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 18373 12250 EITALAPSTMK True PC9_epitope_Rep2 1160.61111041228 1160.61000993586 52.43 2 0.21884711567598147 0.00039635354736424893 0.0006188477774540604 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 111083 5824 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 27.795 2 0.2188368157013651 0.00039635354736424893 0.0006189943875157931 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 38596 14310 HEYPWILSA True H1975_Epitope_Rep2 1114.54474510462 1114.54364993586 60.192 2 0.21882431315560186 0.00039635354736424893 0.0006191723958494474 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 118267 21996 TYLNWLVRM True PC9_epitope_Rep1 1194.6219498795 1194.6208499358602 89.429 2 0.21882058520289005 0.00039635354736424893 0.0006192254835119477 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 91066 20106 RFLNDPGHLLW True PC9_epitope_Rep2 1366.7146043943799 1366.71295490379 82.747 3 0.21881992802627415 0.00039635354736424893 0.0006192348424653127 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 94874 4210 RSYSSVIEK True NCI_RA007_Epitope_Rep4 1067.56112344475 1067.56002993586 22.505 2 0.21881848752382652 0.00039635354736424893 0.0006192553573789569 ['nc|ENSG00000142197|Q9Y3R5-2|DOP1B', 'ENSG00000142197|ENST00000691173|DOP1B'] 77619 5967 NTEEEGLKY True H1975_Epitope_Rep3 1081.4927691014097 1081.49217496793 27.963 1 0.21881615163762688 0.00039635354736424893 0.0006192886253485879 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 25988 8528 FGESDELIGQK True H1975_Epitope_Rep1 1221.5877321154096 1221.5866299358602 37.731 2 0.21880870722538207 0.00039635354736424893 0.0006193946615198959 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 22739 10682 ETTFLVDKY True H1975_Epitope_Rep3 1114.5546410819798 1114.55354993586 46.164 2 0.21880748613824 0.00039635354736424893 0.0006194120560900944 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 93511 19491 RQLDMELVSV True PC9_epitope_Rep1 1188.61725842188 1188.6161699358602 79.79 2 0.21880043901842486 0.00039635354736424893 0.0006195124529501944 ['ENSG00000089902|ENST00000262241|RCOR1'] 90852 9245 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 40.518 3 0.21879377017968363 0.00039635354736424893 0.0006196074756617496 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 92518 19478 RLYPEGLAQL True PC9_epitope_Rep5 1158.6397081186199 1158.6386099358601 79.975 2 0.2187929260258518 0.00039635354736424893 0.0006196195048534348 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 116311 10901 TTDWRCYGY True H1975_Epitope_Rep2 1163.47059418819 1163.46948993586 46.961 2 0.21878171765178733 0.00039635354736424893 0.0006197792463909232 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 42599 6788 IEGEGSVLQAK True NCI_RA007_Epitope_Rep2 1129.59790287629 1129.5968099358602 31.02 2 0.2187639666775313 0.00039635354736424893 0.0006200323174893634 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 126630 16599 VLNEYFHNV True PC9_epitope_Rep1 1133.5505587610498 1133.54946993586 68.672 2 0.21876103408901523 0.00039635354736424893 0.0006200741366319795 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 102465 20061 SLVDEFKEL True PC9_epitope_Rep4 1078.55464108198 1078.55354993586 85.301 2 0.21875837490273864 0.00039635354736424893 0.000620112059465135 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 10148 6459 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep4 1119.5171508382302 1119.51604993586 31.443 2 0.21875719663374613 0.00039635354736424893 0.0006201288635819625 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 106455 19950 STIRLLTSL True PC9_epitope_Rep5 1002.60734536118 1002.60624993586 81.79 2 0.21873477225655014 0.00039635354736424893 0.0006204487603905401 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 95191 17578 RVIEGDVVSAL True PC9_epitope_Rep3 1156.6451874218799 1156.6440899358602 72.802 2 0.21873395681105784 0.00039635354736424893 0.0006204603963151881 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 116330 6797 TTESEVMKY True H1975_Epitope_Rep3 1086.4903265732598 1086.48922993586 31.098 2 0.21873168618205996 0.00039635354736424893 0.0006204927980010819 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 23643 19969 EWSPYTKIFQF True PC9_epitope_Rep6 1444.7027022979998 1444.70160993586 89.473 2 0.21872434578344155 0.00039635354736424893 0.0006205975564917149 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 88867 13132 QVDPLSALKY True H1975_Epitope_Rep2 1132.6128246644398 1132.61172993586 55.634 2 0.21871976110609587 0.00039635354736424893 0.0006206629957124549 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 32803 7837 GHFQGEIKL True NCI_RA007_Epitope_Rep4 1027.5450794577898 1027.54398993586 36.844 2 0.21870677627103888 0.00039635354736424893 0.0006208483718457961 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'nc|ENSG00000168918|Q92835-3|INPP5D', 'INPP5D|p.L843F|1|0.17|ENSG00000168918|chr2:233193894-233193894|G/T|missense_variant'] 57315 6973 LEAANGELEVK True H1975_Epitope_Rep1 1171.6084675599898 1171.60736993586 31.862 2 0.21870002353824675 0.00039635354736424893 0.0006209447982224432 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 99367 15163 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep1 1277.7343370957499 1277.7332299358602 63.146 2 0.2186899123299111 0.00039635354736424893 0.0006210892104095329 ['ENSG00000100632|ENST00000557016|ERH'] 118006 18303 TYDYNFHSF True PC9_epitope_Rep1 1192.48253877088 1192.4814499358602 75.191 2 0.21868008650945053 0.00039635354736424893 0.0006212295788622133 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 36255 9212 GVDSSIFQNPK True NCI_RA007_Epitope_Rep1 1190.59315184902 1190.5920499358601 39.833 2 0.2186767085298247 0.00039635354736424893 0.0006212778429248339 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 71921 6196 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep3 1282.5975859869 1282.59648993586 28.845 2 0.21867005076872373 0.00039635354736424893 0.0006213729790251627 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 71900 6819 MEQELAHAV True H1975_Epitope_Rep2 1026.4804305958999 1026.47932993586 31.148 2 0.21866766334663207 0.00039635354736424893 0.0006214070976619258 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 11935 16184 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.5480899358602 70.195 2 0.21866296370586452 0.00039635354736424893 0.0006214742656959785 ['ENSG00000273749|ENST00000617928|CYFIP1'] 134518 21591 VYQLRFQFL True PC9_epitope_Rep5 1212.6655289436396 1212.6644299358602 88.09 2 0.21865099700548024 0.00039635354736424893 0.0006216453286259366 ['ENSG00000068654|ENST00000263857|POLR1A'] 38852 6202 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 28.839 2 0.218634283431511 0.00039635354736424893 0.0006218843267716192 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 97614 4590 SEEYPNKPP True H1975_Epitope_Rep2 1059.48728979815 1059.48618993586 22.761 2 0.21863419836110545 0.00039635354736424893 0.0006218855434838681 ['ENSG00000119048|ENST00000265339|UBE2B'] 77152 14677 NRPNLYYEV True PC9_epitope_Rep3 1166.57202248162 1166.57092993586 61.591 2 0.21863284425976034 0.00039635354736424893 0.0006219049107249259 ['ENSG00000004700|ENST00000444129|RECQL'] 70786 19236 LYANMFERL True PC9_epitope_Rep4 1155.57466533391 1155.5735699358602 82.091 2 0.2186313747792656 0.00039635354736424893 0.0006219259288786016 ['ENSG00000004478|ENST00000001008|FKBP4'] 128391 16399 VPRPAVLDPAL True PC9_epitope_Rep4 1146.67609362734 1146.6749899358601 71.039 2 0.218626187999896 0.00039635354736424893 0.0006220001216964746 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 115173 6046 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 28.648 3 0.21862206386413743 0.00039635354736424893 0.0006220591205673532 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 74765 17143 NHDFQALAL True PC9_epitope_Rep2 1027.50869394907 1027.50758993586 71.19 2 0.2186137408371172 0.00039635354736424893 0.0006221782048441929 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 98349 5988 SEYIHAQVA True NCI_RA007_Epitope_Rep3 1016.4927095317598 1016.49217496793 30.533 1 0.21860884224213714 0.00039635354736424893 0.000622248303695926 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 101489 21711 SLLDIIEKV True PC9_epitope_Rep4 1028.61176203528 1028.6106699358602 91.71 2 0.21860774590418422 0.00039635354736424893 0.0006222639933677398 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 108813 7220 SYTSVKENF True NCI_RA007_Epitope_Rep4 1073.5029398622898 1073.50184993586 34.405 2 0.21860111132647714 0.00039635354736424893 0.0006223589491541782 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 133895 7687 VYHHLVETL True NCI_RA007_Epitope_Rep4 1109.58694426977 1109.58584993586 36.231 2 0.21858444887107178 0.00039635354736424893 0.000622597490624289 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 95759 14731 RYIANTVEL True PC9_epitope_Rep1 1077.58185888933 1077.5807699358602 61.485 2 0.21858042344884546 0.00039635354736424893 0.0006226551327507748 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 107136 16429 SVIDHIHLI True PC9_epitope_Rep6 1045.59202965021 1045.59092993586 75.597 2 0.2185782833847487 0.00039635354736424893 0.000622685779628068 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 20063 10043 EMEAELEDER True PC9_epitope_Rep3 1249.5132468458098 1249.5121499358602 43.586 2 0.2185782604861549 0.00039635354736424893 0.0006226861075565202 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 37830 14360 GYIESVQHI True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 60.059 2 0.21857484654621243 0.00039635354736424893 0.0006227350001849709 ['ENSG00000125871|ENST00000377710|MGME1'] 142597 16903 YYLTPDGQRF True PC9_epitope_Rep1 1258.59823722946 1258.5971499358602 69.842 2 0.21857335489553212 0.00039635354736424893 0.0006227563640202372 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 24322 12906 EYVEKFYRI True PC9_epitope_Rep6 1245.6393737654498 1245.63826993586 61.175 2 0.21856915815449582 0.00039635354736424893 0.0006228164748559137 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 60889 12680 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 54.081 2 0.21856569765928477 0.00039635354736424893 0.0006228660446615954 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 88383 20041 QSLEYLEQV True PC9_epitope_Rep5 1107.54480467427 1107.54427496793 82.14 1 0.21856449962572058 0.00039635354736424893 0.0006228832067957602 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 35983 5213 GTVIHFNNPK True NCI_RA007_Epitope_Rep5 1125.59309227937 1125.59143490379 26.748 3 0.21855802574843164 0.00039635354736424893 0.0006229759549368794 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 9710 14990 AYGKDFHLI True PC9_epitope_Rep5 1062.5498304850598 1062.5487299358601 62.662 2 0.2185387993042484 0.00039635354736424893 0.0006232514846930266 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'MIER1|p.K332Nfs*25|1|0.17|ENSG00000198160|chr1:66976643-66976643|A/-|frameshift_variant', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 106101 8550 STDGEVETQVY True H1975_Epitope_Rep2 1226.53027680894 1226.5291699358602 37.843 2 0.21853282422873102 0.00039635354736424893 0.0006233371370295458 ['ENSG00000047410|ENST00000367478|TPR'] 52716 18367 KMIEDLQNEL True PC9_epitope_Rep1 1231.61183868827 1231.6107499358602 75.44 2 0.21852968394374006 0.00039635354736424893 0.0006233821575546001 ['ENSG00000198887|ENST00000361138|SMC5'] 24088 18442 EYPDRIMNTF True PC9_epitope_Rep2 1284.5808729131597 1284.5797699358602 76.269 2 0.21851526285687684 0.00039635354736424893 0.0006235889465796646 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 86566 11028 QLDVAGRVMQY True H1975_Epitope_Rep1 1278.6390564956198 1278.6379499358602 47.38 2 0.2185135039833977 0.00039635354736424893 0.0006236141723924439 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 134852 13523 VYVERAEVL True PC9_epitope_Rep1 1076.5866099165999 1076.58550993586 56.872 2 0.2185130237293425 0.00039635354736424893 0.000623621060387526 ['ENSG00000089234|ENST00000419234|BRAP'] 24334 7167 EYVRNQQTI True PC9_epitope_Rep1 1149.57783613805 1149.5767299358602 32.378 2 0.21849876213355685 0.00039635354736424893 0.0006238256406744156 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 40223 20606 HQIDLIVQL True PC9_epitope_Rep5 1077.61824439805 1077.6171499358602 84.31 2 0.21849364244280045 0.00039635354736424893 0.0006238990982356913 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 9514 5610 AVVVPSGEEQR True NCI_RA007_Epitope_Rep1 1169.6040508858898 1169.6029499358601 25.885 2 0.21848479175450786 0.00039635354736424893 0.0006240261087948556 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000463348.5_1_6:30229165-30231201:+|nuORF', 'ENST00000482052.5_1_6:30229165-30260340:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H'] 132490 15303 VVDIQGVGDLY True H1975_Epitope_Rep2 1176.6026539035597 1176.60154993586 64.022 2 0.21848303027433422 0.00039635354736424893 0.0006240513897639524 ['ENSG00000103319|ENST00000263026|EEF2K'] 53291 15718 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6745149037902 65.618 3 0.21848268167545906 0.00039635354736424893 0.0006240563930175159 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 87306 11708 QPQPQPYAV True PC9_epitope_Rep5 1026.5134449763398 1026.5123499358601 50.033 2 0.21847523035615798 0.00039635354736424893 0.0006241633474509333 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 54960 6401 KYQEVTNNL True NCI_RA007_Epitope_Rep4 1107.5560380643099 1107.5549499358601 31.223 2 0.2184739548594207 0.00039635354736424893 0.0006241816574658681 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 77346 4647 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 22.973 2 0.21847340251307187 0.00039635354736424893 0.0006241895866772058 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 34174 16786 GNFNYIEFTR True PC9_epitope_Rep6 1259.5934862021898 1259.5923899358602 77.069 2 0.21846429134563372 0.00039635354736424893 0.0006243203966808517 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 67918 7407 LTDADAMKY True H1975_Epitope_Rep3 1026.46919720586 1026.46808993586 33.468 2 0.2184618966410877 0.00039635354736424893 0.0006243547822742292 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 49474 20357 KFAEEFYSF True PC9_epitope_Rep3 1166.5284263341398 1166.52732993586 83.552 2 0.21844657250766528 0.00039635354736424893 0.0006245748666943143 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 86038 10784 QHQSGIVQL True PC9_epitope_Rep1 1008.5352430500798 1008.53414993586 46.369 2 0.21844035056330963 0.00039635354736424893 0.0006246642481580422 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 16452 14928 EELEEVIKDI True H1975_Epitope_Rep1 1215.6234489177898 1215.62234993586 62.66 2 0.2184390306915407 0.00039635354736424893 0.000624683210451824 ['nc|ENSG00000143106|P28066-2|PSMA5', 'ENSG00000143106|ENST00000271308|PSMA5'] 108269 20411 SYIEHIFEI True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 86.657 2 0.21842849875274262 0.00039635354736424893 0.0006248345410845303 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 134129 17635 VYLDHAGATLF True PC9_epitope_Rep6 1205.6080736371698 1205.6069699358602 80.473 2 0.21842598794878434 0.00039635354736424893 0.0006248706235896151 ['ENSG00000075643|ENST00000261326|MOCOS'] 100885 9933 SLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep1 1204.5434251557197 1204.5423299358602 42.641 2 0.21841042648244144 0.00039635354736424893 0.0006250943024577609 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 108491 13999 SYMGHFDLL True NCI_RA007_Epitope_Rep3 1081.49026700361 1081.4891699358602 62.372 2 0.21840331618758327 0.00039635354736424893 0.0006251965318209243 ['ENSG00000169976|ENST00000367569|SF3B5'] 130166 10476 VSEDSSVTQIY True H1975_Epitope_Rep3 1226.56666231766 1226.5655699358601 45.358 2 0.2183958064719769 0.00039635354736424893 0.0006253045221328323 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 23909 21196 EYLADLYHF True PC9_epitope_Rep5 1169.5393253710101 1169.53822993586 86.578 2 0.21839386245146666 0.00039635354736424893 0.0006253324803529343 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 78424 11724 NYLSHHLTI True PC9_epitope_Rep4 1096.5665431783602 1096.5654499358602 52.857 2 0.21838972866090922 0.00039635354736424893 0.0006253919352459236 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 96276 7148 RYQTQPVTL True NCI_RA007_Epitope_Rep3 1104.5927579261997 1104.5916699358602 35.234 2 0.21837947161589324 0.00039635354736424893 0.0006255394833072253 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 24112 16858 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 70.092 2 0.21837556883316542 0.00039635354736424893 0.0006255956341881444 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 75574 4937 NLDDNAQRY True H1975_Epitope_Rep2 1107.49450043691 1107.4934099358602 24.073 2 0.21837107438348732 0.00039635354736424893 0.0006256603038813194 ['ENSG00000198113|ENST00000357503|TOR4A'] 60435 5396 LGVIEDHSNR True PC9_epitope_Rep5 1138.5730851107799 1138.57144490379 25.768 3 0.218370011051237 0.00039635354736424893 0.0006256756049270806 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 98260 9920 SEVEVIHVP True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 46.103 2 0.2183651068382736 0.00039635354736424893 0.0006257461800027561 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 99174 5784 SHITPSTQQHL True PC9_epitope_Rep1 1247.62584895963 1247.62420490379 27.064 3 0.21836053319211005 0.00039635354736424893 0.0006258120051876552 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 90565 7356 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 33.302 2 0.21835956487297903 0.00039635354736424893 0.0006258259423964963 ['ENSG00000026025|ENST00000544301|VIM'] 7548 10206 ASEFGNHYLY True H1975_Epitope_Rep3 1199.52473793603 1199.52364993586 44.302 2 0.2183394119489685 0.00039635354736424893 0.0006261160781198386 ['ENSG00000189091|ENST00000302516|SF3B3', 'SF3B3-CDH15|1|fusion'] 14426 6356 DTDSQRLAY True H1975_Epitope_Rep2 1067.4883524273098 1067.48724993586 29.376 2 0.2183256105088787 0.00039635354736424893 0.0006263148512540351 ['ENSG00000101412|ENST00000343380|E2F1'] 43028 8482 IETLTQQLQAK True H1975_Epitope_Rep1 1271.7085159544301 1271.7074099358601 37.555 2 0.21831648579145943 0.00039635354736424893 0.0006264463033717016 ['ENSG00000143256|ENST00000368010|PFDN2'] 53283 15479 KQLDDLKVEL True PC9_epitope_Rep1 1199.6761531969898 1199.6745149037902 64.361 3 0.2183158637088593 0.00039635354736424893 0.0006264552661996081 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 92721 4723 RNVSTGDVNVE True NCI_RA007_Epitope_Rep3 1188.5734790335998 1188.5723899358602 25.526 2 0.21829686264335776 0.00039635354736424893 0.0006267290913242023 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 138317 16616 YHDINVYSL True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 71.884 2 0.21829103857072366 0.00039635354736424893 0.0006268130463148175 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 43200 19880 IFIDPGYQTF True PC9_epitope_Rep6 1199.58627556343 1199.5851699358602 89.125 2 0.21828719061888036 0.00039635354736424893 0.000626868521381072 ['ENSG00000121741|ENST00000610343|ZMYM2'] 36257 8420 GVDSSIFQNPK True NCI_RA007_Epitope_Rep3 1190.59315184902 1190.5920499358601 40.209 2 0.21828512614807682 0.00039635354736424893 0.0006268982864281511 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 18886 12331 ELDTVTLEDIK True NCI_RA007_Epitope_Rep1 1274.6605627024999 1274.6594699358602 51.936 2 0.2182817064541279 0.00039635354736424893 0.0006269475938789159 ['ENSG00000108344|ENST00000264639|PSMD3'] 48281 10999 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65934993586 47.627 2 0.2182729387001259 0.00039635354736424893 0.0006270740310406679 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 22430 6783 ETEREYFNRY True H1975_Epitope_Rep3 1405.6262428824498 1405.62514993586 31.045 2 0.21826813929787003 0.00039635354736424893 0.0006271432526222952 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 18372 12717 EITALAPSTMK True PC9_epitope_Rep1 1160.61111041228 1160.61000993586 53.788 2 0.21826537012387182 0.00039635354736424893 0.0006271831957931588 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 131146 5686 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 26.869 2 0.21826325847224182 0.00039635354736424893 0.0006272136564330888 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 77331 11038 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.4967499358602 47.42 2 0.218254794230882 0.00039635354736424893 0.0006273357682762616 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 24235 5446 EYSKQMQRF True PC9_epitope_Rep4 1215.57064258263 1215.56954993586 27.685 2 0.21825255702996327 0.00039635354736424893 0.0006273680478923842 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 140913 6142 YSEGYPGQRY True H1975_Epitope_Rep1 1218.53055159246 1218.5294499358602 28.695 2 0.21824759594874965 0.00039635354736424893 0.000627439635158941 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 104078 17347 SQDSFYRVL True PC9_epitope_Rep5 1113.54547338061 1113.54436993586 71.723 2 0.21823758335041865 0.00039635354736424893 0.000627584139625761 ['ENSG00000143179|ENST00000367879|UCK2', 'UCK2|p.S70L|1|0.15|ENSG00000143179|chr1:165890313-165890313|C/T|missense_variant'] 73310 8408 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 37.294 2 0.21822368887516178 0.00039635354736424893 0.0006277847236903833 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 140055 15898 YQHGIFQSI True PC9_epitope_Rep2 1091.53999407735 1091.5388899358602 66.405 2 0.21822226376587583 0.00039635354736424893 0.0006278053005556079 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1'] 97378 6843 SEDPTDDSRLP True H1975_Epitope_Rep1 1230.53642481854 1230.53532993586 31.366 2 0.21821945257809505 0.00039635354736424893 0.0006278458927124438 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 77833 5676 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.4979749679298 26.83 1 0.21821032542114766 0.00039635354736424893 0.0006279777024861132 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 89193 7637 QVSPEAGVQKV True PC9_epitope_Rep5 1140.6138872935999 1140.61278993586 34.323 2 0.2182041150087789 0.00039635354736424893 0.000628067405986582 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 9903 14046 AYLLNLNHL True NCI_RA007_Epitope_Rep5 1069.59202965021 1069.59092993586 60.718 2 0.21820199241484112 0.00039635354736424893 0.0006280980677853392 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 142381 17049 YYEKQFPEI True PC9_epitope_Rep1 1215.5811901829898 1215.58008993586 70.404 2 0.21820045967979906 0.00039635354736424893 0.0006281202097479431 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 48417 13583 IYVNPANTHQF True PC9_epitope_Rep5 1302.6356853673399 1302.63458993586 57.27 2 0.21819494990548097 0.00039635354736424893 0.0006281998106753197 ['ENSG00000132716|ENST00000368074|DCAF8'] 133464 9040 VVYQYWNTK True NCI_RA007_Epitope_Rep3 1199.5975089534697 1199.59640993586 42.652 2 0.21819269213608622 0.00039635354736424893 0.0006282324320923318 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 57336 8451 LEAEIATYR True NCI_RA007_Epitope_Rep1 1064.55022440788 1064.54912993586 36.872 2 0.21818152492756496 0.00039635354736424893 0.0006283938066780998 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 108243 22135 SYIDVLPEF True PC9_epitope_Rep4 1081.53317736141 1081.53208993586 93.358 2 0.21816473041077022 0.00039635354736424893 0.0006286365784271683 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 49885 6938 KIFVGGIKEN True NCI_RA007_Epitope_Rep4 1103.6338944621898 1103.63278993586 33.31 2 0.2181635200602729 0.00039635354736424893 0.0006286540781837598 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 1932 8018 AEILNGKEISA True H1975_Epitope_Rep2 1143.61355294043 1143.61244993586 35.789 2 0.21816188356668045 0.00039635354736424893 0.0006286777400737014 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 102492 12724 [Acetylation]-SLVIPEKFQH True NCI_RA007_Epitope_Rep1 1238.66592318276 1238.66482993586 53.478 2 0.2181509073826915 0.00039635354736424893 0.0006288364666699227 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 9757 10646 AYIERMNYI True NCI_RA007_Epitope_Rep3 1171.5695799534699 1171.56848993586 48.924 2 0.21814655210626727 0.00039635354736424893 0.000628899459464461 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 49858 9168 KIDENQLMY True H1975_Epitope_Rep3 1152.54851015572 1152.54740993586 40.254 2 0.21814455671989777 0.00039635354736424893 0.0006289283219664359 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN'] 8755 11110 AVDAVIAELK True H1975_Epitope_Rep3 1027.5913609438699 1027.59026993586 47.829 2 0.21813587195585712 0.00039635354736424893 0.0006290539592441384 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 54042 10241 KVIDPATATSV True PC9_epitope_Rep2 1100.607739284 1100.60664993586 44.726 2 0.21813290241939653 0.00039635354736424893 0.000629096923525902 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 38348 8929 HEIESLYTKL True NCI_RA007_Epitope_Rep3 1231.6448530687098 1231.6437499358601 42.205 2 0.2181250885670769 0.00039635354736424893 0.0006292099911144502 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 142429 20479 YYFDSYAHF True PC9_epitope_Rep5 1211.4923751785898 1211.4912699358601 83.811 2 0.218124252593812 0.00039635354736424893 0.0006292220889775002 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.T357Pfs*4|1|0.34|ENSG00000111218|chr12:3592317-3592317|G/-|frameshift_variant', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF'] 71638 10916 M[Oxidation]DVAASEFFR True H1975_Epitope_Rep1 1187.5281094447498 1187.5270099358602 46.95 2 0.21812146246940223 0.00039635354736424893 0.0006292624682057939 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'ENO1|p.S254Y|1|0.15|ENSG00000074800|chr1:8865389-8865389|G/T|missense_variant'] 1473 11060 AEEIAGKWLQA True H1975_Epitope_Rep3 1214.62953735774 1214.62844993586 47.632 2 0.21812139631335462 0.00039635354736424893 0.0006292634256606585 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 78609 20838 NYSPYVNYF True PC9_epitope_Rep2 1165.50802524273 1165.5069299358602 85.599 2 0.2181171693720541 0.00039635354736424893 0.0006293246038316678 ['ENSG00000156162|ENST00000414645|DPY19L4'] 78380 11778 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.6069699358602 56.473 2 0.21811630585627412 0.00039635354736424893 0.0006293371025666375 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 64829 9203 LQDFFNGK True H1975_Epitope_Rep3 967.4763311916299 967.4752299358599 40.391 2 0.21810119512805146 0.00039635354736424893 0.0006295558591974024 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 7525 8706 ASDRNIVLY True H1975_Epitope_Rep2 1049.5505587610498 1049.54946993586 38.449 2 0.21809767469163352 0.00039635354736424893 0.0006296068351906532 ['ENSG00000164934|ENST00000612750|DCAF13'] 70920 19926 LYFHINQTL True PC9_epitope_Rep5 1147.60259433391 1147.6014899358602 81.7 2 0.21809661339350164 0.00039635354736424893 0.000629622203622331 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 129075 15371 VQPRNWLLF True NCI_RA007_Epitope_Rep3 1171.6502132326698 1171.64910993586 68.021 2 0.2180935696580943 0.00039635354736424893 0.0006296662813927161 ['ENSG00000060762|ENST00000360961|MPC1'] 7198 11541 AQYLINARL True NCI_RA007_Epitope_Rep1 1060.60292868708 1060.60182993586 48.859 2 0.21809195115310093 0.00039635354736424893 0.0006296897209890522 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3', 'PCBP1|p.S349F|1|0.19|ENSG00000169564|chr2:70088789-70088789|C/T|missense_variant'] 22059 6437 ESLQQM[Oxidation]AEVTR True NCI_RA007_Epitope_Rep2 1306.6187153542999 1306.6176099358602 29.646 2 0.21809119200443625 0.00039635354736424893 0.0006297007154725485 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 7915 7176 ATANQIILK True NCI_RA007_Epitope_Rep2 970.58113061334 970.58002993586 32.534 2 0.21806301551345075 0.00039635354736424893 0.0006301089219694844 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 43017 15059 IETIEVMEDR True PC9_epitope_Rep3 1233.59110324369 1233.59000993586 63.055 2 0.21805974300891212 0.00039635354736424893 0.0006301563495369201 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 49543 9092 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 45.055 2 0.21804896060519202 0.00039635354736424893 0.0006303126414881538 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 10084 15173 AYTLLLHTW True NCI_RA007_Epitope_Rep4 1116.59678067748 1116.59568993586 65.958 2 0.21804585831520046 0.00039635354736424893 0.0006303576166767052 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 15391 5360 EAIEGTYIDKK True NCI_RA007_Epitope_Rep5 1265.6503323719696 1265.6486849037901 27.307 3 0.21804435938594385 0.00039635354736424893 0.0006303793484314185 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF'] 8934 13755 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6971299358602 57.931 2 0.2180371652225218 0.00039635354736424893 0.0006304836612113867 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 74967 8286 NHNSQVWRV True PC9_epitope_Rep1 1138.5631891334199 1138.56154490379 36.705 3 0.21803660992380236 0.00039635354736424893 0.0006304917135629075 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 70890 19627 LYEKDIQLF True PC9_epitope_Rep2 1167.6175756917098 1167.61646993586 80.88 2 0.21802050499508674 0.00039635354736424893 0.0006307252950124641 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 49182 4477 KEMELPAKEA True H1975_Epitope_Rep2 1144.5798102839997 1144.5787099358602 22.333 2 0.21802041538174954 0.00039635354736424893 0.0006307265949825029 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 21249 18598 ERDPVLWSL True PC9_epitope_Rep6 1113.58185888933 1113.5807699358602 84.181 2 0.21802032662570328 0.00039635354736424893 0.000630727882518958 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 133786 18939 VYEYVVERF True PC9_epitope_Rep3 1202.5971746002995 1202.5960699358602 78.075 2 0.21801097058511756 0.00039635354736424893 0.0006308636203837796 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 10065 10958 AYSSYVHQY True PC9_epitope_Rep3 1116.48762415132 1116.48652993586 47.132 2 0.2180085378391465 0.00039635354736424893 0.0006308989195748098 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 60836 9410 LHVDPENFR True PC9_epitope_Rep4 1125.55670677065 1125.5550749037902 43.804 3 0.21800424066556298 0.00039635354736424893 0.0006309612764885681 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__Q3SX09'] 113057 10187 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1189.6376598937302 1189.63656993586 44.229 2 0.21799773720545018 0.00039635354736424893 0.0006310556609103674 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 84244 18919 PYMDSPQSIGF True PC9_epitope_Rep6 1240.5434247752798 1240.5423299358602 85.416 2 0.21799271189697067 0.00039635354736424893 0.000631128602686946 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 14800 9371 DVQM[Oxidation]LQDAISK True H1975_Epitope_Rep1 1262.6176527251398 1262.6165499358601 40.955 2 0.21798960084891245 0.00039635354736424893 0.0006311737634324778 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 78515 21063 NYPETLGRLLI True PC9_epitope_Rep3 1287.7186867153098 1287.7175899358601 86.3 2 0.21798087313827114 0.00039635354736424893 0.000631300474353676 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 41073 7987 HTMEFALVK True NCI_RA007_Epitope_Rep3 1074.55320161334 1074.55210993586 38.516 2 0.21797933865195354 0.00039635354736424893 0.0006313227550189353 ['ENSG00000182636|ENST00000649030|NDN'] 141355 5292 YTDVSTRY True H1975_Epitope_Rep3 1003.46107505031 1003.45996993586 25.435 2 0.2179756048041785 0.00039635354736424893 0.0006313769735993346 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 44527 9546 ILMEHIHKL True PC9_epitope_Rep2 1132.64268532408 1132.64104490379 42.065 3 0.21797539082988984 0.00039635354736424893 0.000631380080825807 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 96048 10610 RYLQTLTTI True NCI_RA007_Epitope_Rep3 1107.62880908175 1107.6277099358601 48.785 2 0.21797036137058962 0.00039635354736424893 0.0006314531205106899 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 23089 17802 EVIKELAQI True PC9_epitope_Rep5 1041.6070110080097 1041.6059099358602 73.495 2 0.21796690799466117 0.00039635354736424893 0.0006315032766336914 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 25645 4726 FEQAGEPRQP True H1975_Epitope_Rep2 1157.5465360097699 1157.54542993586 23.272 2 0.21795529934042332 0.00039635354736424893 0.0006316719076496028 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 118001 12163 TYDSVTDKF True PC9_epitope_Rep2 1074.48695544498 1074.4858499358602 52.097 2 0.21795153368187664 0.00039635354736424893 0.0006317266185118939 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 26835 9383 FLDANVKESY True H1975_Epitope_Rep3 1184.57135377528 1184.5702499358601 41.093 2 0.21794633761892349 0.00039635354736424893 0.0006318021193782154 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-2|HPS1'] 88292 12546 QSELVGQLY True H1975_Epitope_Rep3 1035.52367530687 1035.52256993586 53.457 2 0.21794555576276536 0.00039635354736424893 0.0006318134808435539 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 115176 6321 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 29.711 3 0.217926975338506 0.00039635354736424893 0.0006320835407691201 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 86211 18241 QIIRELQVL True PC9_epitope_Rep4 1110.67609362734 1110.6749899358601 78.233 2 0.2179219067271664 0.00039635354736424893 0.0006321572313557804 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 78244 12088 NYGRVFSEW True NCI_RA007_Epitope_Rep3 1156.53015766964 1156.5290699358602 54.667 2 0.21791749664024265 0.00039635354736424893 0.0006322213549226438 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 133798 20030 VYFPDQHINF True PC9_epitope_Rep1 1278.6033226099 1278.6022299358601 81.873 2 0.21791085092138573 0.00039635354736424893 0.0006323179973633921 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 107780 19223 SVTDLAFKV True PC9_epitope_Rep3 978.5385970950199 978.53750993586 79.161 2 0.21789284711742893 0.00039635354736424893 0.0006325798842337142 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 30110 18518 FYLEGGFSKF True PC9_epitope_Rep6 1193.57571087973 1193.57460993586 83.871 2 0.21789191595074736 0.00039635354736424893 0.0006325934321268223 ['ENSG00000139318|ENST00000279488|DUSP6'] 32193 12342 GEVYFADSFDR True NCI_RA007_Epitope_Rep1 1304.5673310239997 1304.56622993586 51.98 2 0.21789092191174023 0.00039635354736424893 0.0006326078950942448 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 134507 12427 VYQHLFTRI True PC9_epitope_Rep4 1175.6451278522297 1175.64349490379 55.604 3 0.217882773269098 0.00039635354736424893 0.0006327264678926027 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 86046 9382 QHQSGIVQL True PC9_epitope_Rep4 1008.5352430500798 1008.53414993586 43.697 2 0.2178737126300424 0.00039635354736424893 0.0006328583375463833 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 65015 20638 LQIEDFEARI True PC9_epitope_Rep1 1232.6401020414398 1232.63900993586 84.205 2 0.217863001172034 0.00039635354736424893 0.0006330142689927649 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 53053 11834 KPNPNQIISV True PC9_epitope_Rep2 1108.62405805448 1108.62296993586 50.849 2 0.21783419723067615 0.00039635354736424893 0.0006334337719836019 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 45642 15080 IRDPFIHEI True PC9_epitope_Rep2 1138.6134933707801 1138.6118549037901 63.263 3 0.21783364014903853 0.00039635354736424893 0.0006334418881158041 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 140837 5867 YSDMREANY True H1975_Epitope_Rep3 1147.46042342731 1147.45932993586 27.578 2 0.21783146642029685 0.00039635354736424893 0.0006334735582060819 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 54521 20073 KYIENLDNITF True PC9_epitope_Rep2 1368.6925315371197 1368.69142993586 82.616 2 0.21782661670838413 0.00039635354736424893 0.0006335442216973089 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 140360 11887 YRDPTTVTTL True PC9_epitope_Rep4 1165.59790287629 1165.5968099358602 53.499 2 0.2178249630517782 0.00039635354736424893 0.0006335683183694709 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 25606 11191 FEMDEKDFAA True H1975_Epitope_Rep2 1201.4961402296901 1201.4950499358602 48.086 2 0.21782328743943039 0.00039635354736424893 0.0006335927359132277 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2'] 69642 6894 LVDQRVAEY True H1975_Epitope_Rep1 1091.56112344475 1091.56002993586 31.558 2 0.21782292438801876 0.00039635354736424893 0.0006335980265356529 ['ENSG00000143157|ENST00000367876|POGK'] 86537 19149 QLDDLKVEL True PC9_epitope_Rep2 1071.58119018299 1071.58008993586 79.028 2 0.21781328550497359 0.00039635354736424893 0.0006337385068505122 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 120042 11922 VDSLLENLEK True H1975_Epitope_Rep3 1158.61321858726 1158.6121299358601 51.011 2 0.21780795971799136 0.00039635354736424893 0.0006338161400604075 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 2558 9374 AEQQERFFM[Oxidation]P True H1975_Epitope_Rep2 1297.5761222663298 1297.5750299358601 41.02 2 0.21780602625466086 0.00039635354736424893 0.0006338443262305116 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 75135 9362 NHYNNIM[Oxidation]AL True PC9_epitope_Rep4 1104.50222905008 1104.50112993586 43.621 2 0.21780264338980998 0.00039635354736424893 0.0006338936449074843 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 104975 12226 SRDKTIIM[Oxidation]W True PC9_epitope_Rep2 1164.59612943492 1164.59502993586 52.339 2 0.21777782453538336 0.00039635354736424893 0.0006342555959502466 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 21888 6636 ESDINSVRY True H1975_Epitope_Rep3 1081.50400249145 1081.50290993586 30.48 2 0.21773377373245295 0.00039635354736424893 0.0006348985309414296 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000559541.1_1_15:52416976-52428016:-|nuORF'] 141252 12357 YTDHLQSYVIY True H1975_Epitope_Rep1 1400.6612314088402 1400.6601299358601 52.561 2 0.2177305322935256 0.00039635354736424893 0.0006349458665592966 ['ENSG00000090989|ENST00000381295|EXOC1', 'nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENST00000511971.5_1_4:56749994-56766742:+|nuORF'] 35622 12986 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 55.031 2 0.217720168422274 0.00039635354736424893 0.0006350972367633432 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 45584 17749 IQTAVRLLL True PC9_epitope_Rep6 1025.6597152872098 1025.65860993586 80.906 2 0.21771553114415546 0.00039635354736424893 0.0006351649785589017 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 88631 5122 QTEERVQPEY True H1975_Epitope_Rep2 1277.58879474457 1277.58768993586 24.777 2 0.21769006682978292 0.00039635354736424893 0.0006355370928933245 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 9836 17995 AYLEAYKEF True PC9_epitope_Rep3 1132.54407639828 1132.5429699358601 74.421 2 0.2176746421894479 0.00039635354736424893 0.000635762602142686 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 72301 9391 MIEPRTLQY True H1975_Epitope_Rep1 1149.58523001761 1149.5841299358601 41.034 2 0.2176712852381989 0.00039635354736424893 0.0006358116916263969 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 71747 12289 MEENPGIFA True H1975_Epitope_Rep2 1006.4429824580199 1006.44247496793 52.354 1 0.21765475017676075 0.00039635354736424893 0.0006360535432067332 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 131425 14153 VTIEDVQKL True PC9_epitope_Rep6 1043.58627556343 1043.5851699358602 66.309 2 0.217651471226422 0.00039635354736424893 0.0006361015140382234 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 48390 7069 IYTSSVNRL True NCI_RA007_Epitope_Rep5 1051.56620882519 1051.5651099358602 33.872 2 0.21765116343003008 0.00039635354736424893 0.0006361060172659103 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 138732 10894 YIQENLELVEK True NCI_RA007_Epitope_Rep2 1376.71874628496 1376.7176499358602 46.982 2 0.21764167145365598 0.00039635354736424893 0.0006362449057186523 ['ENSG00000100714|ENST00000652337|MTHFD1'] 125946 10669 VLDELTLAR True H1975_Epitope_Rep3 1028.5866099165999 1028.58550993586 46.111 2 0.21764166418211614 0.00039635354736424893 0.000636245012128907 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 78339 19262 NYIVPDKQIF True PC9_epitope_Rep5 1235.6550238295897 1235.65392993586 79.132 2 0.2176325217375172 0.00039635354736424893 0.0006363788149540288 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 142283 13815 YYAEVETRI True PC9_epitope_Rep5 1142.5607890915799 1142.5596899358602 58.158 2 0.2176296489409671 0.00039635354736424893 0.0006364208651503112 ['ENSG00000112685|ENST00000230449|EXOC2'] 49412 8270 KEVEYDELSAA True H1975_Epitope_Rep2 1252.5823123818 1252.5812099358602 36.763 2 0.21761220633282868 0.00039635354736424893 0.0006366762389801681 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'DYNC2H1|p.G2197Wfs*36|1|0.44|ENSG00000187240|chr11:103185004-103185005|-/T|frameshift_variant'] 136813 14138 YAAELIERV True PC9_epitope_Rep6 1062.57095985246 1062.5698699358602 66.252 2 0.21761134711172894 0.00039635354736424893 0.000636688821325814 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 89445 17119 QYEIWRELF True NCI_RA007_Epitope_Rep3 1282.6346227381798 1282.63352993586 75.21 2 0.21760770992327125 0.00039635354736424893 0.0006367420867040251 ['nc|ENSG00000168092|P68402-3|PAFAH1B2', 'nc|ENSG00000168092|P68402-2|PAFAH1B2', 'ENST00000533206.1_1_11:117023163-117034692:+|nuORF', 'nc|ENSG00000168092|P68402-4|PAFAH1B2', 'ENSG00000168092|ENST00000527958|PAFAH1B2'] 14134 8654 DSDFRKDDFY True H1975_Epitope_Rep3 1306.5465955794198 1306.5454899358601 38.284 2 0.21760114229573344 0.00039635354736424893 0.0006368382786842842 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 24395 19970 FAAPEKDIFL True PC9_epitope_Rep3 1149.60701100801 1149.6059099358602 82.06 2 0.21759748813070368 0.00039635354736424893 0.0006368918052933243 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 21534 7532 ERM[Oxidation]PEQIRL True PC9_epitope_Rep2 1186.6128421282199 1186.61119490379 34.339 3 0.2175948597566266 0.00039635354736424893 0.0006369303087954407 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 103366 4570 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 22.699 2 0.21758905670335615 0.00039635354736424893 0.00063701532698792 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 84365 19004 PYYSKFILI True PC9_epitope_Rep6 1142.6375828603 1142.63648993586 85.742 2 0.21757397022170433 0.00039635354736424893 0.0006372364062286001 ['ENSG00000164815|ENST00000297431|ORC5'] 26007 14135 FGFVTFDDHD True NCI_RA007_Epitope_Rep4 1198.4931034545798 1198.49200993586 61.649 2 0.21756841658229997 0.00039635354736424893 0.0006373178093587228 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 99036 4649 SHEGETAYIR True PC9_epitope_Rep5 1161.54145062933 1161.5398049037901 22.939 3 0.21756681169809086 0.00039635354736424893 0.0006373413350830717 ['ENSG00000136450|ENST00000258962|SRSF1'] 68023 9163 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60664993586 40.152 2 0.2175622990497804 0.00039635354736424893 0.0006374074898959713 ['ENSG00000167658|ENST00000309311|EEF2'] 11681 10821 DGTGVVEFVR True NCI_RA007_Epitope_Rep2 1077.5454733806098 1077.54436993586 46.694 2 0.21756228112902432 0.00039635354736424893 0.0006374077526255621 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 140418 15381 YRFNGQYSSL True PC9_epitope_Rep5 1233.5778361380499 1233.5767299358602 64.172 2 0.21755091423334225 0.00039635354736424893 0.0006375744203819078 ['ENST00000592618.5_1_19:1010351-1011343:-|nuORF', 'ENSG00000182087|ENST00000356663|TMEM259'] 75573 9164 NLDDGIDDER True PC9_epitope_Rep5 1160.49456000656 1160.49346993586 40.196 2 0.21754972310946305 0.00039635354736424893 0.0006375918878346407 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 116858 5575 TVEVAEGEAVR True H1975_Epitope_Rep3 1158.5880664685799 1158.58696993586 26.486 2 0.21754681348072907 0.00039635354736424893 0.0006376345586333939 ['ENSG00000147649|ENST00000336273|MTDH', 'LAPTM4B-MTDH|1|fusion'] 61375 7380 LITEDVQGK True PC9_epitope_Rep1 1001.5393253710098 1001.53822993586 33.199 2 0.2175341328284559 0.00039635354736424893 0.000637820558622211 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 23004 9873 EVFEDAAEIR True NCI_RA007_Epitope_Rep2 1177.5615173675699 1177.5604299358602 43.03 2 0.2175262606975559 0.00039635354736424893 0.000637936054538001 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 7914 6997 ATANQIILK True NCI_RA007_Epitope_Rep1 970.58113061334 970.58002993586 31.215 2 0.2175227600574463 0.00039635354736424893 0.0006379874208962308 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 70802 16038 LYAPYSTHF True PC9_epitope_Rep2 1097.51819600361 1097.5170899358602 66.946 2 0.21752224680097484 0.00039635354736424893 0.0006379949524721875 ['ENSG00000013588|ENST00000014914|GPRC5A'] 71879 6740 MENEMAHYA True H1975_Epitope_Rep2 1094.41611608718 1094.41500993586 30.84 2 0.21751934480509363 0.00039635354736424893 0.000638037538323466 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 97932 7096 SENEYIMKA True H1975_Epitope_Rep2 1083.4906609264299 1083.4895699358601 32.226 2 0.2175127049566937 0.00039635354736424893 0.0006381349866807669 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 68031 9322 LTDITKGVQY True H1975_Epitope_Rep3 1136.607739284 1136.60664993586 40.854 2 0.21750407363141727 0.00039635354736424893 0.0006382616848592776 ['ENSG00000167658|ENST00000309311|EEF2'] 133933 6699 VYIKHPVSL True NCI_RA007_Epitope_Rep5 1054.61751612206 1054.61640993586 32.441 2 0.21750048872763703 0.00039635354736424893 0.0006383143146459904 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 120643 5606 VEILANDQGNR True H1975_Epitope_Rep3 1227.6207635791898 1227.6196699358602 26.604 2 0.21749208443337367 0.00039635354736424893 0.0006384377147252848 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 137747 8153 YENEVALRQ True PC9_epitope_Rep3 1120.5512870370399 1120.55018993586 36.339 2 0.21749006281395927 0.00039635354736424893 0.0006384674016926555 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 11666 13452 DGQFSVLFTK True H1975_Epitope_Rep3 1140.5815245361598 1140.5804299358601 57.016 2 0.21748091702013184 0.00039635354736424893 0.0006386017226587113 ['CON__P12763'] 106944 7814 SVDYGQTHYY True H1975_Epitope_Rep2 1231.51456717515 1231.51346993586 35.004 2 0.21747799134096088 0.00039635354736424893 0.0006386446970360482 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A', 'ENST00000557013.1_1_14:55168817-55201659:+|nuORF', 'ENST00000555112.1_1_14:55034634-55169324:+|nuORF'] 24094 17814 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5797699358602 76.555 2 0.2174762327978095 0.00039635354736424893 0.00063867052911722 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 22125 4835 ESQSVEEALKK True NCI_RA007_Epitope_Rep2 1246.6404959642598 1246.63885490379 23.43 3 0.2174414431378445 0.00039635354736424893 0.0006391817866474275 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 25997 19533 FGFEITHEV True PC9_epitope_Rep5 1077.51311062317 1077.51200993586 80.186 2 0.21743867502754394 0.00039635354736424893 0.0006392224835285882 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 142832 10052 YYSPTKNEI True PC9_epitope_Rep5 1113.53423999057 1113.5331499358601 43.644 2 0.21742926097744722 0.00039635354736424893 0.0006393609087705564 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 140826 4076 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 20.804 2 0.217422233277852 0.00039635354736424893 0.0006394642644556441 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 18536 13260 EKLEATINELV True H1975_Epitope_Rep3 1257.68163250025 1257.68052993586 56.263 2 0.2173964527419536 0.00039635354736424893 0.0006398435598254546 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 141092 12041 YSQDYQQFY True H1975_Epitope_Rep2 1240.5036681382799 1240.50256993586 51.395 2 0.2173950695424034 0.00039635354736424893 0.0006398639164871868 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000441812.6_1_3:50144918-50150831:+|nuORF', 'ENST00000494360.5_1_3:50144211-50147205:+|nuORF', 'ENST00000489437.1_1_3:50144918-50148299:+|nuORF'] 27916 21280 FQEEDFPAL True PC9_epitope_Rep5 1094.4920408254197 1094.49094993586 86.906 2 0.21738864317816575 0.00039635354736424893 0.0006399585023424043 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 142382 16266 YYEKQFPEI True PC9_epitope_Rep2 1215.5811901829898 1215.58008993586 67.808 2 0.21737096464397446 0.00039635354736424893 0.0006402187746193796 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 95422 15427 RWFQPAIPSW True NCI_RA007_Epitope_Rep3 1286.6560268890996 1286.65492993586 68.237 2 0.21737058118523142 0.00039635354736424893 0.0006402244212686737 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 106303 12072 STFQQMWISK True NCI_RA007_Epitope_Rep5 1254.60669373818 1254.60558993586 53.092 2 0.21735762538393053 0.00039635354736424893 0.0006404152322209861 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 37411 15108 GVTDLYYILK True NCI_RA007_Epitope_Rep4 1183.64887581999 1183.6477699358602 65.678 2 0.2173335909839805 0.00039635354736424893 0.0006407693581114936 ['ENST00000508918.5_1_4:16504706-16675844:-|nuORF', 'nc|ENSG00000169744|O43679-2|LDB2', 'nc|ENSG00000169744|O43679-3|LDB2', 'ENSG00000169744|ENST00000304523|LDB2'] 29311 16476 FVDDYTVRV True PC9_epitope_Rep5 1112.55022440788 1112.54912993586 68.373 2 0.2173211297285801 0.00039635354736424893 0.0006409530411615734 ['ENSG00000115233|ENST00000409682|PSMD14'] 54001 18585 KVFDPVPVGV True PC9_epitope_Rep5 1055.60153170475 1055.6004299358601 76.512 2 0.21731948745886515 0.00039635354736424893 0.000640977252703345 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 105628 8478 SSDSVGGFRY True H1975_Epitope_Rep1 1073.47778774361 1073.4766899358601 37.54 2 0.2173092916225246 0.00039635354736424893 0.000641127587717802 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 134417 19136 VYPHPGTWESF True PC9_epitope_Rep5 1318.59823722946 1318.5971499358602 78.642 2 0.21729551439251382 0.00039635354736424893 0.0006413307856743001 ['ENSG00000197165|ENST00000335715|SULT1A2'] 110841 19361 TGPTRFFLF True PC9_epitope_Rep6 1084.5705659296398 1084.56946993586 87.121 2 0.21728965900196318 0.00039635354736424893 0.0006414171653719892 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 88042 13280 QRQDIAFAY True PC9_epitope_Rep4 1110.5458077337798 1110.54470993586 58.977 2 0.21728516171022957 0.00039635354736424893 0.0006414835180955725 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 58042 8839 LEIESQTEEQP True H1975_Epitope_Rep2 1301.5986907219299 1301.59758993586 38.966 2 0.2172795430921629 0.00039635354736424893 0.0006415664244654659 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 97562 5011 SEETLDEGPPK True H1975_Epitope_Rep3 1200.55101225352 1200.5499099358601 24.4 2 0.21726821095635077 0.00039635354736424893 0.0006417336702218602 ['ENSG00000100442|ENST00000396062|FKBP3'] 92137 14587 RLDTPLYFSY True H1975_Epitope_Rep2 1273.6342883850098 1273.6331899358602 61.265 2 0.21726585028358947 0.00039635354736424893 0.0006417685158055873 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF', 'ENST00000481465.3_1_1:43215737-43220567:-|nuORF'] 61186 22330 LILEPSLYTV True PC9_epitope_Rep5 1146.65362684726 1146.65252993586 90.902 2 0.21725367792738043 0.00039635354736424893 0.0006419482205074856 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 38499 5357 HEQSRIITV True H1975_Epitope_Rep2 1081.58800689893 1081.5869099358601 25.651 2 0.21724217871668616 0.00039635354736424893 0.0006421180337076778 ['ENSG00000158006|ENST00000374282|PAFAH2'] 46684 8356 ITDSAGHILYS True H1975_Epitope_Rep1 1175.58225281215 1175.5811499358601 37.071 2 0.21722309553420027 0.00039635354736424893 0.0006423999417603211 ['ENSG00000170348|ENST00000303575|TMED10'] 106581 3925 STNPFRPQK True NCI_RA007_Epitope_Rep4 1073.56179215109 1073.5606899358602 21.329 2 0.21721873981089818 0.00039635354736424893 0.0006424643044849218 ['nc|ENSG00000133136|A0A804HLA8|GNG5B', 'ENSG00000174021|ENST00000370645|GNG5'] 87796 12811 QRDPNSPLYSV True PC9_epitope_Rep5 1274.62551460646 1274.62440993586 54.288 2 0.21720484943839302 0.00039635354736424893 0.0006426696000039333 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF'] 134819 16508 VYTYIQSRF True PC9_epitope_Rep1 1175.5975089534697 1175.59640993586 68.322 2 0.21719705836563122 0.00039635354736424893 0.0006427847785233323 ['DYRK2|p.A390*|1|0.05|ENSG00000127334|chr12:67658074-67658075|-/TA|frameshift_variant', 'DYRK2|p.P391Efs*19|1|0.04|ENSG00000127334|chr12:67658076-67658077|-/CGAGGTTTGTAGAGGT|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 114819 21652 TQLNMFQTL True PC9_epitope_Rep1 1094.54303085246 1094.54192993586 88.113 2 0.21719507106655694 0.00039635354736424893 0.0006428141608690501 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 87902 11424 QRIIQQETL True PC9_epitope_Rep3 1127.62987171091 1127.6287699358602 48.942 2 0.21718831239251052 0.00039635354736424893 0.0006429140983886906 ['ENSG00000180182|ENST00000324817|MED14'] 48393 10326 IYTSSVNRL True PC9_epitope_Rep1 1051.56620882519 1051.5651099358602 44.602 2 0.2171831782120164 0.00039635354736424893 0.000642990025660773 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 137508 6220 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 28.893 2 0.2171829227909904 0.00039635354736424893 0.0006429938032116216 ['ENSG00000127184|ENST00000247655|COX7C'] 88553 5902 QTDERLAQY True H1975_Epitope_Rep3 1122.53055159246 1122.5294499358602 27.712 2 0.21717770887232185 0.00039635354736424893 0.0006430709193609493 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3'] 8251 13242 ATGSWDSFLK True NCI_RA007_Epitope_Rep1 1110.53457434374 1110.53346993586 55.508 2 0.21717490296381417 0.00039635354736424893 0.0006431124238220979 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 91551 17084 RIIDVVYNA True PC9_epitope_Rep3 1061.58694426977 1061.58584993586 70.865 2 0.2171534451960169 0.00039635354736424893 0.0006434299118955246 ['ENSG00000142937|ENST00000396651|RPS8'] 78548 17168 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.5344899358602 70.857 2 0.2171518571462483 0.00039635354736424893 0.0006434534148506488 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 78123 20501 NWPSRPYLF True PC9_epitope_Rep5 1178.58727862294 1178.5861899358601 83.896 2 0.21714816930652106 0.00039635354736424893 0.0006435079977802125 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 78156 15378 NYAQVFNKL True PC9_epitope_Rep6 1095.57129420563 1095.57018993586 71.297 2 0.21714798081308792 0.00039635354736424893 0.0006435107877561222 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 137656 14391 YEIKQFLECA True H1975_Epitope_Rep3 1242.59546034814 1242.5943699358602 60.707 2 0.21714704083099143 0.00039635354736424893 0.0006435247010342212 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2'] 114451 8818 TPVPSDIDISR True H1975_Epitope_Rep1 1198.61936659686 1198.61826993586 38.841 2 0.21713730565254594 0.00039635354736424893 0.0006436688154081887 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000413059.1_1_X:57420873-57421110:-|nuORF'] 39725 8570 HLVDEPQNLIK True NCI_RA007_Epitope_Rep4 1304.7088503076 1304.7077499358602 39.749 2 0.21712562020476497 0.00039635354736424893 0.0006438418432898126 ['CON__P02769'] 115190 9380 TRDPQVNAF True PC9_epitope_Rep5 1046.5145076054998 1046.5134099358602 41.035 2 0.21712332629724723 0.00039635354736424893 0.0006438758149438027 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 134735 9123 VYTSGVYHI True NCI_RA007_Epitope_Rep4 1037.51819600361 1037.5170899358602 41.932 2 0.21712190853397645 0.00039635354736424893 0.0006438968122271718 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 9983 12131 AYPHNLMTF True NCI_RA007_Epitope_Rep4 1092.50625142092 1092.5051499358601 53.657 2 0.21711838870344463 0.00039635354736424893 0.0006439489444072723 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 111020 10211 THDDSHLVSL True PC9_epitope_Rep5 1122.5305515924601 1122.5294499358602 44.264 2 0.21711656166470508 0.00039635354736424893 0.0006439760063321604 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 24312 14352 EYVEKFYRI True PC9_epitope_Rep2 1245.6393737654498 1245.63772490379 60.466 3 0.217102676335346 0.00039635354736424893 0.0006441817118103441 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 130201 15965 VSEPRYFQL True PC9_epitope_Rep6 1137.5818588893299 1137.5807699358602 73.709 2 0.2170888123202963 0.00039635354736424893 0.0006443871673037876 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 106083 14071 STATAFYRL True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 62.035 2 0.21707963792693807 0.00039635354736424893 0.0006445231618676919 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant', 'ENSG00000008394|ENST00000396210|MGST1', 'nc|ENSG00000008394|P10620-2|MGST1', 'ENST00000539708.5_1_12:16507186-16513330:+|nuORF', 'ENST00000539036.5_1_12:16500588-16536519:+|nuORF', 'ENST00000538857.1_1_12:16507186-16536519:+|nuORF', 'ENST00000537878.5_1_12:16500588-16507345:+|nuORF'] 9078 9243 AVIGADSVTLK True NCI_RA007_Epitope_Rep1 1072.61282466444 1072.61172993586 39.951 2 0.21706996839703702 0.00039635354736424893 0.0006446665271480649 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 141353 5440 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 25.952 2 0.2170695444720073 0.00039635354736424893 0.0006446728132044044 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 118371 12366 TYNPAFSRL True PC9_epitope_Rep6 1067.53999407735 1067.5388899358602 58.971 2 0.2170604023088635 0.00039635354736424893 0.0006448083902350444 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 41267 8825 HVLVTLGEK True PC9_epitope_Rep5 994.58113061334 994.58002993586 38.89 2 0.21705105033439767 0.00039635354736424893 0.0006449471083396538 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 9901 13518 AYLLNLNHL True NCI_RA007_Epitope_Rep3 1069.59202965021 1069.59092993586 60.462 2 0.21704862383676907 0.00039635354736424893 0.0006449831055405444 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 48388 6917 IYTSSVNRL True NCI_RA007_Epitope_Rep3 1051.56620882519 1051.5651099358602 34.31 2 0.21704293292688887 0.00039635354736424893 0.0006450675383517221 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 111332 5417 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 25.67 2 0.21703776004801256 0.00039635354736424893 0.0006451442950515859 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 4878 11375 ALEQQVEEMK True PC9_epitope_Rep3 1203.58053855999 1203.57944993586 48.757 2 0.21703252197866682 0.00039635354736424893 0.0006452220284048238 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 45471 20583 IQLPSEKAIFL True PC9_epitope_Rep2 1257.7332741502898 1257.7321699358602 84.605 2 0.2170304086547585 0.00039635354736424893 0.0006452533929552182 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 90956 5581 REYQVKLQA True NCI_RA007_Epitope_Rep5 1133.61930702721 1133.61820993586 28.154 2 0.21702708482949137 0.00039635354736424893 0.0006453027260582507 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 134035 8184 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5287299358602 41.04 2 0.2170222840803622 0.00039635354736424893 0.0006453739867405802 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 4734 9658 ALDFIASK True NCI_RA007_Epitope_Rep2 863.47526856247 863.47416993586 42.184 2 0.2170202164532811 0.00039635354736424893 0.0006454046803241803 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 22277 12029 ETDEKDFYLY True H1975_Epitope_Rep3 1321.5714133449299 1321.57030993586 51.43 2 0.21701433463178355 0.00039635354736424893 0.0006454920030058654 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 22343 5083 ETDRGMSAEY True H1975_Epitope_Rep2 1157.46590273057 1157.46480993586 24.635 2 0.21701299076987127 0.00039635354736424893 0.0006455119559083755 ['ENSG00000100347|ENST00000350028|SAMM50'] 43715 10217 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 44.635 2 0.21701172654038015 0.00039635354736424893 0.0006455307270386042 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 12774 5972 DLEPGTM[Oxidation]DSVR True H1975_Epitope_Rep3 1234.54996708814 1234.54886993586 27.982 2 0.21700861761111043 0.00039635354736424893 0.0006455768903828755 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 22273 11916 ETDEKDFYLY True H1975_Epitope_Rep1 1321.5714133449299 1321.57030993586 50.836 2 0.2170010494026802 0.00039635354736424893 0.0006456892817657365 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 73247 4129 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 20.976 2 0.21699140407184303 0.00039635354736424893 0.0006458325478283181 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 68322 13070 LTELMFEHY True H1975_Epitope_Rep3 1181.54269649929 1181.5415899358602 55.516 2 0.2169907070007722 0.00039635354736424893 0.0006458429029471256 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 8093 10358 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.45562993586 44.85 2 0.2169901177561196 0.00039635354736424893 0.0006458516564146118 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 38369 4506 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 22.444 2 0.2169825864691431 0.00039635354736424893 0.000645963547211291 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 60963 9964 LIDQDARDLY True H1975_Epitope_Rep3 1220.60371653272 1220.60260993586 43.36 2 0.21698214012008124 0.00039635354736424893 0.0006459701791388736 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2'] 7046 6471 AQQLAEVEVK True H1975_Epitope_Rep3 1113.6029882567298 1113.60188993586 29.863 2 0.2169750480105542 0.00039635354736424893 0.0006460755640327331 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 28531 11937 FSEIDLEKY True H1975_Epitope_Rep1 1142.54955570154 1142.5484499358602 50.919 2 0.2169713939634403 0.00039635354736424893 0.0006461298679207661 ['ENSG00000178700|ENST00000314636|DHFR2'] 49969 16538 KIQEILTQV True PC9_epitope_Rep1 1070.63356010902 1070.6324699358602 68.436 2 0.21696033605459775 0.00039635354736424893 0.0006462942307158435 ['ENSG00000136231|ENST00000258729|IGF2BP3', 'nc|ENSG00000136231|O00425-2|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 36067 17403 GVAANDVIVHI True PC9_epitope_Rep5 1106.6084079903399 1106.60730993586 71.941 2 0.21694304368976672 0.00039635354736424893 0.0006465513454598813 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 134519 4472 VYQNHVQHL True NCI_RA007_Epitope_Rep2 1136.57269118796 1136.5710449037902 22.028 3 0.21693838503350893 0.00039635354736424893 0.0006466206311048481 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 139129 4711 YLDQEKEDGKY True H1975_Epitope_Rep3 1386.63032520338 1386.62866490379 23.247 3 0.21692506152282032 0.00039635354736424893 0.0006468188255103306 ['ENSG00000158411|ENST00000289359|MITD1'] 137176 14529 YAYDGKDYL True PC9_epitope_Rep3 1106.4920408254197 1106.49094993586 61.007 2 0.21691438929537346 0.00039635354736424893 0.0006469776246128274 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 40873 7832 HSEYHTLLY True H1975_Epitope_Rep1 1161.54547338061 1161.54436993586 35.077 2 0.2169143582615685 0.00039635354736424893 0.0006469780864422904 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant'] 141655 9221 YTSYPM[Oxidation]HDFY True H1975_Epitope_Rep1 1338.5226897111402 1338.5215899358602 40.378 2 0.2169083880550279 0.00039635354736424893 0.0006470669382036195 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 55428 17757 LAFEEEFGRV True PC9_epitope_Rep6 1195.5873381925899 1195.58624993586 80.936 2 0.2168833294260567 0.00039635354736424893 0.0006474400074921392 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF', 'EIF3I|p.K282N|1|0.28|ENSG00000084623|chr1:32230969-32230969|G/C|missense_variant'] 22243 12729 ESYSVYVYK True PC9_epitope_Rep2 1136.5389910178399 1136.5378899358602 54.267 2 0.21687482993388627 0.00039635354736424893 0.0006475665957268345 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 21799 7751 ERYKEVAEL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 35.188 2 0.2168643641194454 0.00039635354736424893 0.0006477225037416033 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 4415 19015 AIQDKLFQV True PC9_epitope_Rep3 1060.59169529704 1060.5905899358602 78.363 2 0.21685807555528208 0.00039635354736424893 0.0006478162018605441 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 104113 2615 SQEGRPVQV True PC9_epitope_Rep2 998.5145076054997 998.51340993586 14.715 2 0.21684621022100398 0.00039635354736424893 0.0006479930295750637 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 111291 15375 THMELYSQL True PC9_epitope_Rep2 1120.52229540788 1120.52118993586 64.422 2 0.21684377401753427 0.00039635354736424893 0.0006480293420278228 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 121416 16111 VEVTEFEDIK True PC9_epitope_Rep2 1207.59723416995 1207.59612993586 67.23 2 0.21684144837375535 0.00039635354736424893 0.0006480640084551143 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 98797 20312 SGLLKVWQV True PC9_epitope_Rep3 1028.6018660579198 1028.6007699358602 83.378 2 0.21682739052433878 0.00039635354736424893 0.0006482735966837218 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 78516 20066 NYPETLGRLLI True PC9_epitope_Rep4 1287.7186867153098 1287.7175899358601 85.32 2 0.2168236027707542 0.00039635354736424893 0.0006483300798651469 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 31619 4913 GEFEKKYVA True NCI_RA007_Epitope_Rep4 1069.5444107514497 1069.5433099358602 25.357 2 0.21682154002435203 0.00039635354736424893 0.000648360841725116 ['ENSG00000132341|ENST00000543796|RAN'] 134341 8728 VYPDGIRHI True PC9_epitope_Rep2 1068.5716285587998 1068.5705299358601 38.933 2 0.21681306170586717 0.00039635354736424893 0.0006484872947745993 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 133894 6525 VYHHLVETL True NCI_RA007_Epitope_Rep3 1109.58694426977 1109.58584993586 32.707 2 0.21680830423095857 0.00039635354736424893 0.000648558262750434 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 90837 11035 RETNLDSLPL True NCI_RA007_Epitope_Rep3 1156.6088019131598 1156.6077099358602 50.504 2 0.2168061241585649 0.00039635354736424893 0.0006485907858250203 ['ENSG00000026025|ENST00000544301|VIM'] 34938 5006 GQNPTNAEVLK True NCI_RA007_Epitope_Rep5 1169.6040508858898 1169.6029499358601 25.96 2 0.21680148567251714 0.00039635354736424893 0.0006486599898104598 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 71146 21313 LYLPTLTHF True PC9_epitope_Rep1 1103.6015317047502 1103.6004299358601 86.808 2 0.2167739888400972 0.00039635354736424893 0.0006490703815151233 ['ENST00000537473.2_1_12:57058103-57058217:-|nuORF'] 35872 8029 GTMTGMLYK True NCI_RA007_Epitope_Rep3 1000.47217441132 1000.4716749679301 38.674 1 0.21677258371690822 0.00039635354736424893 0.0006490913600495501 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 15087 20802 DYTIGFGKF True PC9_epitope_Rep1 1046.50729696674 1046.5061899358602 84.841 2 0.21675662330168327 0.00039635354736424893 0.0006493296973196496 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 28508 11623 FSEDPNEQELY True H1975_Epitope_Rep2 1369.56739059365 1369.5662899358601 49.776 2 0.21674946204672094 0.00039635354736424893 0.0006494366650510409 ['ENSG00000109436|ENST00000442267|TBC1D9'] 48130 13760 IYPELQIERF True NCI_RA007_Epitope_Rep3 1306.6921376142998 1306.69104993586 61.45 2 0.21674861434089088 0.00039635354736424893 0.0006494493284111202 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.G345Efs*28|1|0.53|ENSG00000077420|chr10:26536206-26536206|G/-|frameshift_variant'] 75340 9633 NIPYFETSAK True H1975_Epitope_Rep1 1168.57643915572 1168.57534993586 41.981 2 0.2167486081287372 0.00039635354736424893 0.0006494494212116084 ['ENSG00000075785|ENST00000265062|RAB7A'] 78149 14428 NYAFLHRTL True PC9_epitope_Rep5 1133.59817765981 1133.59654490379 60.496 3 0.21674611036287267 0.00039635354736424893 0.0006494867352574378 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 16447 7703 EELEAALQR True H1975_Epitope_Rep1 1057.5403880001697 1057.53928993586 34.592 2 0.21674455076727972 0.00039635354736424893 0.0006495100350979125 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 90721 4691 REQVTATPRIA True H1975_Epitope_Rep3 1240.6887835693599 1240.68712490379 23.167 3 0.21671411468874166 0.00039635354736424893 0.0006499649079338202 ['nc|ENSG00000169607|Q8IYA6-2|CKAP2L', 'nc|ENSG00000169607|Q8IYA6-3|CKAP2L', 'ENSG00000169607|ENST00000302450|CKAP2L'] 120608 5447 VEHSDLSFSK True NCI_RA007_Epitope_Rep1 1147.5509526838698 1147.54930490379 25.26 3 0.21671154658950623 0.00039635354736424893 0.0006500033032724688 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 40833 9834 HSDPSILGY True H1975_Epitope_Rep3 987.46616043075 987.46506993586 42.855 2 0.21670491087035815 0.00039635354736424893 0.0006501025236382196 ['ENSG00000146830|ENST00000678049|GIGYF1'] 118677 15151 TYTDRVFFL True NCI_RA007_Epitope_Rep4 1160.5866099165999 1160.58550993586 65.862 2 0.2167024174334094 0.00039635354736424893 0.0006501398105975542 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 7488 9271 ASDDFDQASY True H1975_Epitope_Rep3 1117.4199980839699 1117.41890993586 40.654 2 0.21669897810502708 0.00039635354736424893 0.0006501912459777885 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 77362 5407 NSELGSETRY True H1975_Epitope_Rep3 1154.52038083158 1154.5192899358601 25.86 2 0.21669817635166463 0.00039635354736424893 0.0006502032368384277 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF'] 22435 7049 ETERIVTTY True H1975_Epitope_Rep2 1110.5557037111398 1110.55460993586 32.041 2 0.21668261087132437 0.00039635354736424893 0.0006504360749783601 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 48440 8426 IYYITGETK True NCI_RA007_Epitope_Rep2 1086.55972646242 1086.5586299358602 37.416 2 0.21668016045832558 0.00039635354736424893 0.0006504727374016914 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 134698 19813 VYTLLTTHL True PC9_epitope_Rep1 1059.5964463243101 1059.5953499358602 81.026 2 0.216669301494339 0.00039635354736424893 0.0006506352312691994 ['nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 86047 10743 QHQSGIVQL True PC9_epitope_Rep5 1008.5352430500798 1008.53414993586 46.314 2 0.2166674888810814 0.00039635354736424893 0.0006506623592355842 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 65751 6667 LSDDHGASWRY True H1975_Epitope_Rep1 1305.5738133867699 1305.57217490379 30.697 3 0.21666736278912413 0.00039635354736424893 0.000650664246397609 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 98426 7496 SFETTEESLR True NCI_RA007_Epitope_Rep3 1197.55134660669 1197.5502499358602 36.609 2 0.21666717049592693 0.00039635354736424893 0.0006506671243746069 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 15038 12707 DYMKTTSNF True PC9_epitope_Rep3 1105.47501086229 1105.47390993586 53.901 2 0.2166555500808467 0.00039635354736424893 0.0006508410662873358 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 28750 15392 FSSPHLVQV True PC9_epitope_Rep5 1012.5341804209198 1012.53308993586 64.213 2 0.21665245440316072 0.00039635354736424893 0.0006508874122691659 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 48356 14352 IYSTKLYRF True PC9_epitope_Rep5 1189.6495445263297 1189.64788490379 60.205 3 0.21665010207125784 0.00039635354736424893 0.0006509226316934276 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 30055 19337 FYHKYFNYL True PC9_epitope_Rep3 1293.61824439805 1293.6166049037902 79.6 3 0.21664338153844198 0.00039635354736424893 0.0006510232629347153 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 4786 18869 ALDVANKIGII True PC9_epitope_Rep4 1125.6757592741699 1125.67466993586 80.665 2 0.2166431546702564 0.00039635354736424893 0.0006510266602631862 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 35570 3877 GSYSKAFAR True NCI_RA007_Epitope_Rep4 985.4981292653698 985.49702993586 21.121 2 0.2166420382991542 0.00039635354736424893 0.0006510433780683258 ['RPAP3|p.S476Rfs*21|1|0.05|ENSG00000005175|chr12:47670202-47670205|CTTA/-|frameshift_variant', 'nc|ENSG00000005175|Q9H6T3-3|RPAP3', 'nc|ENSG00000005175|Q9H6T3-2|RPAP3', 'ENSG00000005175|ENST00000005386|RPAP3'] 132046 12159 VTTDIQVKV True PC9_epitope_Rep2 1001.5757108797299 1001.5746099358599 52.081 2 0.21663677292068395 0.00039635354736424893 0.000651122233615431 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 66258 9775 LSFETTDESLR True NCI_RA007_Epitope_Rep3 1296.61976051968 1296.61866993586 45.516 2 0.21662687819952686 0.00039635354736424893 0.0006512704452145779 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 40472 8329 HRDGALTQL True PC9_epitope_Rep3 1009.53049202281 1009.52938993586 37.009 2 0.21658427300495117 0.00039635354736424893 0.0006519090090411747 ['ENSG00000127948|ENST00000461988|POR'] 77150 14635 NRPNLYYEV True PC9_epitope_Rep1 1166.57202248162 1166.57092993586 61.117 2 0.21657556334574207 0.00039635354736424893 0.0006520396261530776 ['ENSG00000004700|ENST00000444129|RECQL'] 126284 5029 VLIAAHGNSLR True NCI_RA007_Epitope_Rep3 1149.66184054553 1149.66019490379 26.776 3 0.21657121423323195 0.00039635354736424893 0.000652104858800237 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 40293 7938 HQNEIVQSL True NCI_RA007_Epitope_Rep4 1066.54072235334 1066.5396299358601 37.275 2 0.21656845010449507 0.00039635354736424893 0.0006521463215666266 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant', 'UTP20|p.Y104Ifs*28|1|0.33|ENSG00000120800|chr12:101285863-101285863|C/-|frameshift_variant', 'ENST00000551825.1_1_12:101673946-101684681:+|nuORF'] 8648 11305 AVAEEVNAILK True NCI_RA007_Epitope_Rep5 1155.6499384491499 1155.6488499358602 50.13 2 0.21654716056830703 0.00039635354736424893 0.000652465759701564 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 115564 6192 TRSQEQEVL True PC9_epitope_Rep5 1088.5462016565998 1088.5451099358602 28.801 2 0.21652955043302383 0.00039635354736424893 0.0006527301090254641 ['ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1'] 68174 6947 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 31.641 2 0.21651934172795173 0.00039635354736424893 0.0006528834031768245 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 62341 15094 LLGINVTDFTR True H1975_Epitope_Rep1 1247.68738658703 1247.68628993586 63.312 2 0.2165121348637314 0.00039635354736424893 0.0006529916433674712 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 94718 5626 RSDTPLIYK True NCI_RA007_Epitope_Rep4 1091.5975089534697 1091.59640993586 28.243 2 0.21649943806465413 0.00039635354736424893 0.0006531823809207104 ['ENSG00000196305|ENST00000443024|IARS1'] 18354 7199 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep2 1176.6060254122801 1176.6049299358601 32.622 2 0.2164946659617408 0.00039635354736424893 0.0006532540842478594 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 118495 21121 TYQDIFRDF True PC9_epitope_Rep3 1203.5560380643099 1203.5549499358601 86.525 2 0.2164923990434528 0.00039635354736424893 0.0006532881486405269 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 53835 14672 KTFSEILNRV True PC9_epitope_Rep2 1205.67682190333 1205.6751749037899 61.701 3 0.21648942288855344 0.00039635354736424893 0.000653332873253591 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 15003 15377 DYKESFNTI True PC9_epitope_Rep5 1115.5135045459901 1115.5124099358602 64.156 2 0.21648432521191135 0.00039635354736424893 0.0006534094864898639 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 73575 9406 M[Oxidation]VVESAYEVIK True H1975_Epitope_Rep1 1282.64789022426 1282.6467899358602 41.092 2 0.21648001964901747 0.00039635354736424893 0.0006534742020311353 ['ENSG00000111716|ENST00000350669|LDHB'] 115901 8335 TSFDGSLIQK True NCI_RA007_Epitope_Rep3 1094.56078909158 1094.5596899358602 39.9 2 0.21646568635882021 0.00039635354736424893 0.000653689687484495 ['ENSG00000177485|ENST00000557385|ZBTB33'] 73248 4214 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 21.318 2 0.21644872383822306 0.00039635354736424893 0.0006539447926763611 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 14007 20426 DRFEFPEQL True PC9_epitope_Rep3 1179.5560380643099 1179.5549499358601 83.822 2 0.21644057906849248 0.00039635354736424893 0.0006540673201693215 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 40715 6202 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 29.25 2 0.21643543481073008 0.00039635354736424893 0.0006541447207214573 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 118483 14513 TYPQLEGFKF True NCI_RA007_Epitope_Rep4 1228.6128246644396 1228.61172993586 63.188 2 0.21643136815181532 0.00039635354736424893 0.0006542059142149428 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 53327 18074 KQMEQISQFL True PC9_epitope_Rep4 1250.6329084860197 1250.63180993586 77.582 2 0.2164279245746486 0.00039635354736424893 0.0006542577363089417 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 27270 20907 FLQEQLVEL True PC9_epitope_Rep4 1117.60192562757 1117.60082993586 88.578 2 0.2164204790140252 0.00039635354736424893 0.0006543697979855323 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 74977 19543 NHQDVAGVFAL True PC9_epitope_Rep5 1169.58292151849 1169.58182993586 80.225 2 0.21641629932323087 0.00039635354736424893 0.0006544327141339452 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 24361 21221 EYYRGFTLF True PC9_epitope_Rep3 1194.5709598524597 1194.5698699358602 86.915 2 0.2164053436248893 0.00039635354736424893 0.0006545976571358258 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 118705 17510 TYTDVTPRQFF True PC9_epitope_Rep6 1373.6615657620098 1373.6604699358602 79.982 2 0.2164032934952005 0.00039635354736424893 0.0006546285273998301 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 40341 11259 HQQSIPAVL True PC9_epitope_Rep6 991.5450794577898 991.5439899358599 54.316 2 0.21639351452830863 0.00039635354736424893 0.0006547757963765781 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 49447 6402 KEYDVAVQA True NCI_RA007_Epitope_Rep4 1021.5080252427298 1021.50692993586 31.227 2 0.2163906999439323 0.00039635354736424893 0.0006548181895258574 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 141207 9174 YTADGKEVLEY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 40.192 2 0.21636711609999082 0.00039635354736424893 0.0006551735166056349 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 95130 19685 RVFIGNLNTL True PC9_epitope_Rep3 1145.65569253593 1145.65458993586 80.949 2 0.21636623273711666 0.00039635354736424893 0.0006551868295916063 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 13894 7198 DQVANSAFVER True NCI_RA007_Epitope_Rep4 1234.59421447818 1234.5931099358602 34.314 2 0.21636202321274278 0.00039635354736424893 0.0006552502742238448 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 116316 8384 TTEESLRNYY True H1975_Epitope_Rep1 1274.5778957077 1274.57678993586 37.177 2 0.2163605178962488 0.00039635354736424893 0.0006552729633785891 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 115575 7389 TRSTFSTNY True PC9_epitope_Rep2 1075.49343780775 1075.4923499358601 33.801 2 0.2163444645598576 0.00039635354736424893 0.0006555149792257998 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 53219 6137 KQFEKQVEL True NCI_RA007_Epitope_Rep1 1147.6237237013097 1147.62208490379 27.908 3 0.21634379779911578 0.00039635354736424893 0.0006555250330737604 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 98248 10077 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 43.697 2 0.21633616775660724 0.00039635354736424893 0.0006556400947857583 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 106904 11210 SVDPHGFISY True H1975_Epitope_Rep3 1120.5189242796 1120.5178299358602 48.219 2 0.21632897717369595 0.00039635354736424893 0.0006557485479554042 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant'] 7907 9462 ATALEYVYK True NCI_RA007_Epitope_Rep5 1056.54916177872 1056.5480699358602 43.031 2 0.2163227015293106 0.00039635354736424893 0.0006558432161218738 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 120649 5366 VEILANDQGNR True NCI_RA007_Epitope_Rep3 1227.6207635791898 1227.6196699358602 28.115 2 0.21631965704595882 0.00039635354736424893 0.0006558891471273894 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 77011 14306 NRHYYSITI True PC9_epitope_Rep3 1165.58800689893 1165.58635490379 60.114 3 0.216318475568596 0.00039635354736424893 0.0006559069725130068 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 54529 19934 KYIESPVLF True PC9_epitope_Rep3 1094.60119735158 1094.60010993586 81.919 2 0.21631810552637867 0.00039635354736424893 0.0006559125555766584 ['ENSG00000100304|ENST00000216129|TTLL12'] 37923 8436 GYSFTTTAER True PC9_epitope_Rep6 1131.51965255559 1131.5185499358602 42.14 2 0.2163177825586098 0.00039635354736424893 0.000655917428436962 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 74970 6095 NHNSQVWRV True PC9_epitope_Rep4 1138.5631891334199 1138.56154490379 30.453 3 0.21630365182258987 0.00039635354736424893 0.0006561306651606354 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 62051 8418 LLDSSQKNLY True H1975_Epitope_Rep3 1179.61355294043 1179.61244993586 37.363 2 0.21630085445909464 0.00039635354736424893 0.0006561728863981319 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 118074 13650 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.54357496793 59.188 1 0.21625851715067756 0.00039635354736424893 0.0006568122258729777 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 29126 12909 FTLSHITQL True H1975_Epitope_Rep2 1058.5760452329 1058.57494993586 54.768 2 0.21625828054564544 0.00039635354736424893 0.0006568158006224016 ['ENSG00000148484|ENST00000345264|RSU1'] 9837 16383 AYLEAYKEF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 70.978 2 0.21623791932137307 0.00039635354736424893 0.0006571235015112229 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 30105 20719 FYLEGGFSKF True PC9_epitope_Rep1 1193.57571087973 1193.57460993586 84.52 2 0.21623660832672942 0.00039635354736424893 0.0006571433183507414 ['ENSG00000139318|ENST00000279488|DUSP6'] 117593 6592 TVSSLQESGLK True NCI_RA007_Epitope_Rep2 1147.60846755999 1147.60736993586 30.252 2 0.2162303861717688 0.00039635354736424893 0.0006572373798837657 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 71499 22242 LYYDAIWHF True PC9_epitope_Rep5 1226.5760452328998 1226.57494993586 90.561 2 0.21622876332285423 0.00039635354736424893 0.0006572619150291682 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 90421 16336 REIFLSQPILL True H1975_Epitope_Rep1 1327.7863723523099 1327.78526993586 68.193 2 0.21621418212688412 0.00039635354736424893 0.0006574824030029547 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 29732 20572 FVNDIFERI True PC9_epitope_Rep2 1151.59750895347 1151.59640993586 84.562 2 0.2162109732275768 0.00039635354736424893 0.0006575309359883642 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 54585 12893 KYITQGQLLQF True NCI_RA007_Epitope_Rep3 1337.73433677945 1337.7332299358602 57.977 2 0.21621003612121648 0.00039635354736424893 0.0006575451099280912 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 118544 17876 TYQLGFHSI True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 73.778 2 0.21619524594043754 0.00039635354736424893 0.0006577688552697441 ['ENSG00000142507|ENST00000270586|PSMB6'] 29694 20789 FVLPELPSV True PC9_epitope_Rep6 999.56408356687 999.56298993586 92.733 2 0.21618907603583046 0.00039635354736424893 0.0006578622159515448 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 23999 11347 EYMKHTRLF True PC9_epitope_Rep1 1223.6121134717898 1223.61046490379 48.524 3 0.21616663371519093 0.00039635354736424893 0.0006582019168775468 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 140355 12408 YRDPTTVTTL True PC9_epitope_Rep2 1165.59790287629 1165.5968099358602 53.035 2 0.21616529297783052 0.00039635354736424893 0.0006582222166827205 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 57488 6799 LEDGSRLVSA True H1975_Epitope_Rep2 1045.54038800017 1045.53928993586 31.069 2 0.21616004844900197 0.00039635354736424893 0.0006583016289580386 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A'] 140240 14663 YQYPVIIHL True H1975_Epitope_Rep3 1144.6280808057597 1144.6269899358601 61.768 2 0.21615093037105396 0.00039635354736424893 0.0006584397171190593 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 118275 19313 TYLPAPEGLKF True PC9_epitope_Rep4 1234.65977485686 1234.6586699358602 82.394 2 0.21614434956084172 0.00039635354736424893 0.0006585393978446547 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 89330 20116 QWPPDPPLHF True PC9_epitope_Rep4 1232.59784330664 1232.59674993586 85.512 2 0.21614102467053678 0.00039635354736424893 0.0006585897663183951 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 24149 15730 EYQDLLNVK True PC9_epitope_Rep1 1120.5764391557198 1120.57534993586 65.328 2 0.21614044750263292 0.00039635354736424893 0.0006585985101784432 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 98235 5890 SEVATLTAAGK True H1975_Epitope_Rep3 1046.5607890915799 1046.5596899358602 27.665 2 0.21613371261655476 0.00039635354736424893 0.0006587005495855702 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 5716 7048 APAM[Oxidation]FNIR True NCI_RA007_Epitope_Rep5 934.46947236982 934.46836993586 33.788 2 0.21613211676896046 0.00039635354736424893 0.0006587247303951684 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000493479.1_1_4:153472952-153473506:-|nuORF', 'ENST00000507485.1_1_4:152020792-152024033:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 78014 13825 NVQGIIEILK True H1975_Epitope_Rep3 1125.6757592741699 1125.67466993586 58.483 2 0.21612662026839954 0.00039635354736424893 0.0006588080220031543 ['ENSG00000138095|ENST00000260665|LRPPRC', 'LRPPRC|p.M465Ifs*9|1|0.25|ENSG00000138095|chr2:43963681-43963682|-/A|frameshift_variant'] 35356 7647 GRYAGEESL True PC9_epitope_Rep3 980.4563240230399 980.45522993586 34.414 2 0.216114666971504 0.00039635354736424893 0.0006589891936084094 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 31793 6201 GEIESKFNQA True H1975_Epitope_Rep3 1121.53530261973 1121.5342099358602 28.865 2 0.21610195196881124 0.00039635354736424893 0.0006591819649700494 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 103367 4665 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 23.067 2 0.21609223364141777 0.00039635354736424893 0.0006593293420729228 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 17633 16373 EHIQNIMTL True PC9_epitope_Rep4 1097.55392988933 1097.55282993586 70.941 2 0.2160890031267669 0.00039635354736424893 0.000659378339705944 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 67932 12038 LTDDDLLRY True H1975_Epitope_Rep2 1122.55570371114 1122.55460993586 51.385 2 0.2160817743672039 0.00039635354736424893 0.0006594879924705618 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 27205 21832 FLMDFIHQV True PC9_epitope_Rep5 1148.56885167748 1148.56774993586 89.008 2 0.2160712397417451 0.00039635354736424893 0.0006596478245437939 ['ENSG00000069248|ENST00000261396|NUP133'] 142550 13858 YYLNDLERI True NCI_RA007_Epitope_Rep1 1197.6029882567298 1197.60188993586 57.923 2 0.21606836835914245 0.00039635354736424893 0.0006596913961013957 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 106786 19942 SVADYFKQI True PC9_epitope_Rep2 1069.54441075145 1069.54387496793 82.104 1 0.21605370787134706 0.00039635354736424893 0.0006599139054744075 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 137517 7900 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 35.333 2 0.21604808827801128 0.00039635354736424893 0.0006599992167462168 ['ENSG00000127184|ENST00000247655|COX7C'] 48855 5133 KEAESSPFVER True NCI_RA007_Epitope_Rep2 1277.62518025329 1277.62354490379 24.59 3 0.21604473935741442 0.00039635354736424893 0.0006600500621062063 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 25297 8351 FDQLLAEEK True H1975_Epitope_Rep1 1091.5498900547097 1091.5487899358602 37.052 2 0.21604413077228193 0.00039635354736424893 0.0006600593024397655 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 95175 19234 RVIDDSLVVGV True PC9_epitope_Rep1 1170.66083748602 1170.6597499358602 78.783 2 0.21603858903669862 0.00039635354736424893 0.0006601434502725005 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 2557 11581 AEQQERFFMP True H1975_Epitope_Rep2 1281.5812072663298 1281.58010993586 49.611 2 0.21603416243086637 0.00039635354736424893 0.0006602106732811932 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 125991 13561 VLDPYLLKY True H1975_Epitope_Rep3 1122.63249747986 1122.6314099358601 57.445 2 0.216032585531332 0.00039635354736424893 0.0006602346219406044 ['ENSG00000239789|ENST00000285298|MRPS17'] 7482 9139 ASDDFDQASY True H1975_Epitope_Rep1 1117.4199980839699 1117.41890993586 40.059 2 0.21602977730339454 0.00039635354736424893 0.0006602772731662601 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 86680 19876 QLIDKVWQL True PC9_epitope_Rep4 1141.64954452633 1141.64844993586 84.585 2 0.21596674241355399 0.00039635354736424893 0.0006612353717356252 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 27491 6578 FM[Oxidation]ETATESLAK True H1975_Epitope_Rep3 1242.58020458726 1242.57910993586 30.258 2 0.21596467453028925 0.00039635354736424893 0.0006612668261394901 ['CON__Q58D62'] 90949 5271 REYQLNDSAA True NCI_RA007_Epitope_Rep3 1165.53636524889 1165.53526993586 27.738 2 0.21596228822662156 0.00039635354736424893 0.0006613031258760053 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 115473 15971 TRNDYVMMY True PC9_epitope_Rep3 1191.50526544475 1191.50416993586 66.579 2 0.2159497228514416 0.00039635354736424893 0.0006614942995829635 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 12181 14511 DIFEAQIAGLR True H1975_Epitope_Rep1 1231.6560864587498 1231.6549899358602 61.019 2 0.21593865730642917 0.00039635354736424893 0.0006616627003032119 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 12329 14021 DIQLTQSPSF True NCI_RA007_Epitope_Rep4 1134.55570371114 1134.55460993586 61.213 2 0.2159340765193086 0.00039635354736424893 0.000661732425485984 ['nc|ENSG00000241755|A0A0C4DH69|IGKV1-9'] 48288 10448 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65934993586 47.899 2 0.2159246176915242 0.00039635354736424893 0.0006618764237430355 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 58050 8135 LEIIGNSKNVA True H1975_Epitope_Rep2 1156.64518742188 1156.6440899358602 36.241 2 0.2159239174318132 0.00039635354736424893 0.000661887085529309 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 14770 6912 DVNQQEFVR True NCI_RA007_Epitope_Rep5 1133.5465360097699 1133.54542993586 33.273 2 0.21591504992188917 0.00039635354736424893 0.0006620221124826067 ['ENSG00000105372|ENST00000598742|RPS19'] 64455 7158 LPPNVVEESAR True H1975_Epitope_Rep1 1209.63535101417 1209.63424993586 32.558 2 0.2159095728598352 0.00039635354736424893 0.0006621055263657747 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENST00000462568.1_1_12:9232657-9243123:-|nuORF', 'ENSG00000175899|ENST00000318602|A2M'] 63511 9081 LLYESPERY True H1975_Epitope_Rep3 1168.57643915572 1168.57534993586 39.917 2 0.21588798698871428 0.00039635354736424893 0.0006624343748905271 ['nc|ENSG00000168394|Q03518-2|TAP1', 'ENSG00000168394|ENST00000354258|TAP1'] 125420 2645 VITEEEKNFK True NCI_RA007_Epitope_Rep5 1235.63976768827 1235.63812490379 14.861 3 0.21587268071188373 0.00039635354736424893 0.0006626676566480616 ['ENSG00000167526|ENST00000311528|RPL13', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000570149.1_1_16:89628679-89629447:+|nuORF'] 134176 18842 VYLPNINKI True PC9_epitope_Rep3 1072.62808080576 1072.6269899358601 77.698 2 0.21587255944679845 0.00039635354736424893 0.0006626695051687277 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 57869 5503 LEFEHQRAP True NCI_RA007_Epitope_Rep5 1125.55670677065 1125.5550749037902 27.856 3 0.21586229046561273 0.00039635354736424893 0.0006628260605382229 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 68171 5299 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 25.438 2 0.21585694141130643 0.00039635354736424893 0.0006629076240453355 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 116328 6695 TTESEVMKY True H1975_Epitope_Rep2 1086.4903265732598 1086.48922993586 30.662 2 0.21583533327912183 0.00039635354736424893 0.0006632372119178647 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 82431 11888 PPPLPPPPP True PC9_epitope_Rep2 907.51673945163 907.51564993586 51.05 2 0.21582439760250655 0.00039635354736424893 0.0006634040759589236 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'ENSG00000135723|ENST00000258201|FHOD1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000090470|ENST00000204549|PDCD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 78269 18828 NYIEFTRIL True PC9_epitope_Rep6 1167.62880908175 1167.6277099358601 85.066 2 0.21582259837441142 0.00039635354736424893 0.0006634315338480462 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 90424 16332 REIFLSQPILL True H1975_Epitope_Rep3 1327.7863723523099 1327.78526993586 68.295 2 0.21581664307548637 0.00039635354736424893 0.000663522425365442 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 134280 16077 VYNPELDKW True PC9_epitope_Rep2 1162.5658744720197 1162.56476993586 67.097 2 0.21580673113149554 0.00039635354736424893 0.0006636737320632704 ['ENSG00000178502|ENST00000319121|KLHL11'] 48031 21303 IYLPYLHEW True PC9_epitope_Rep2 1232.62299542532 1232.62188993586 87.406 2 0.21580467059555059 0.00039635354736424893 0.000663705190672072 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 54570 7642 KYISKPENL True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 34.341 2 0.21580105708258376 0.00039635354736424893 0.0006637603625000301 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 114975 18994 TQYPFDFRGA True PC9_epitope_Rep1 1200.5563724174797 1200.55526993586 77.846 2 0.21580073544259298 0.00039635354736424893 0.0006637652735858036 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 21445 14958 ERISLQQEL True PC9_epitope_Rep5 1114.59823722946 1114.5971499358602 62.538 2 0.2157727628290013 0.00039635354736424893 0.0006641925238502969 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 55012 10628 KYQKGFSLW True NCI_RA007_Epitope_Rep4 1155.6076797143498 1155.60658993586 47.728 2 0.21577159889335235 0.00039635354736424893 0.0006642103076388669 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 69712 9059 LVEIADTVPK True H1975_Epitope_Rep1 1083.6175756917098 1083.61646993586 39.754 2 0.21575687900114432 0.00039635354736424893 0.0006644352543028223 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENSG00000137040|ENST00000259569|RANBP6'] 7167 6889 AQYEDIAQKS True PC9_epitope_Rep3 1151.5458673034298 1151.5447699358601 31.513 2 0.2157378272062625 0.00039635354736424893 0.0006647265137941623 ['ENSG00000167768|ENST00000252244|KRT1'] 11848 13634 DHHENKYLLL True PC9_epitope_Rep1 1280.65133543148 1280.6496749037901 57.299 3 0.21572529847349853 0.00039635354736424893 0.0006649181200184382 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 140825 5530 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 26.279 2 0.21572501377712291 0.00039635354736424893 0.0006649224746220043 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 107972 15134 SVYVQLEKV True PC9_epitope_Rep1 1063.5913609438699 1063.59026993586 63.034 2 0.2157176623942053 0.00039635354736424893 0.0006650349283875283 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 67929 11725 LTDDDLLRY True H1975_Epitope_Rep1 1122.55570371114 1122.55460993586 50.092 2 0.21571225581607548 0.00039635354736424893 0.0006651176447414488 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 133701 17877 VYAVIPAEKF True PC9_epitope_Rep2 1135.62774645259 1135.62664993586 74.065 2 0.21570990979655627 0.00039635354736424893 0.0006651535401892807 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 96275 7997 RYQTQPVTL True NCI_RA007_Epitope_Rep1 1104.5927579261997 1104.5916699358602 35.1 2 0.21570924308891767 0.00039635354736424893 0.0006651637415542481 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 137742 5936 YENEVALRQ True NCI_RA007_Epitope_Rep4 1120.5512870370399 1120.55018993586 29.452 2 0.21570244911955821 0.00039635354736424893 0.0006652677057578623 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 54519 14009 KYIENLDNITF True NCI_RA007_Epitope_Rep5 1368.6925315371197 1368.69142993586 60.575 2 0.21570207281770162 0.00039635354736424893 0.00066527346456514 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 21349 19344 ERFNVPVSL True PC9_epitope_Rep3 1059.5712942056298 1059.57018993586 79.628 2 0.21570153296672612 0.00039635354736424893 0.0006652817263649221 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 89586 12209 QYNPKFQTL True PC9_epitope_Rep2 1137.58185888933 1137.5807699358602 52.273 2 0.21567895980807514 0.00039635354736424893 0.000665627274819902 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 41427 10712 HYILHNSFF True NCI_RA007_Epitope_Rep3 1176.5716285587998 1176.5705299358601 49.182 2 0.21567586437848746 0.00039635354736424893 0.0006656746734942927 ['ENSG00000163659|ENST00000295924|TIPARP'] 27285 12092 FLQQNPVTEY True H1975_Epitope_Rep2 1237.59790287629 1237.5968099358602 51.594 2 0.21567558801641948 0.00039635354736424893 0.0006656789054449889 ['ENSG00000055130|ENST00000325222|CUL1'] 84221 21535 PYLFHVVTF True PC9_epitope_Rep5 1121.59096702105 1121.5898699358602 87.87 2 0.2156679939270994 0.00039635354736424893 0.0006657952048019172 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 116654 15739 TVATENEVFRV True PC9_epitope_Rep1 1263.64591569787 1263.6448099358602 65.364 2 0.21566342967029195 0.00039635354736424893 0.0006658651137264537 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16'] 24076 12556 EYPDRIMNTF True NCI_RA007_Epitope_Rep2 1284.5808729131597 1284.5797699358602 53.454 2 0.21565505924836137 0.00039635354736424893 0.0006659933393228804 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 97351 7977 SEDEWTSQA True H1975_Epitope_Rep2 1051.40943340027 1051.4083299358601 35.63 2 0.2156482727821828 0.00039635354736424893 0.0006660973186570633 ['ENSG00000179409|ENST00000319004|GEMIN4'] 12694 12610 DLDSRVLYY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 53.709 2 0.21563773167422565 0.00039635354736424893 0.0006662588573074219 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 73077 12636 MRDVMQQQL True PC9_epitope_Rep5 1147.54779896307 1147.54670993586 53.607 2 0.21562921792129913 0.00039635354736424893 0.0006663893561720898 ['ENSG00000176619|ENST00000325327|LMNB2'] 23679 18694 EYDLIVHQL True PC9_epitope_Rep4 1128.58152453616 1128.5804299358601 79.987 2 0.21562704409327843 0.00039635354736424893 0.0006664226807332047 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 88289 12583 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52256993586 53.449 2 0.21562244704265932 0.00039635354736424893 0.0006664931585556821 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 14717 8599 DVLLQVDDERR True NCI_RA007_Epitope_Rep2 1356.69974217588 1356.69808490379 38.093 3 0.21562024045758557 0.00039635354736424893 0.0006665269905786582 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 10141 13667 AYVHMVTHF True PC9_epitope_Rep5 1103.52223583823 1103.52112993586 57.595 2 0.21561804673762977 0.00039635354736424893 0.0006665606270578682 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 2469 5141 AEQLRDEEV True H1975_Epitope_Rep2 1087.51456717515 1087.51346993586 24.852 2 0.21559336423622225 0.00039635354736424893 0.0006669392031852922 ['ENSG00000149257|ENST00000358171|SERPINH1'] 2376 11354 AEQDLIREL True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 48.65 2 0.21558888334447868 0.00039635354736424893 0.0006670079534961506 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 135400 18311 WHEDITQDL True PC9_epitope_Rep5 1155.5196525555898 1155.5185499358602 75.448 2 0.21555687407192797 0.00039635354736424893 0.0006674992785571448 ['ENSG00000100393|ENST00000263253|EP300'] 41940 4759 IDDPTDSKPED True NCI_RA007_Epitope_Rep2 1230.5251914285 1230.52408993586 23.141 2 0.2155563861100484 0.00039635354736424893 0.0006675067713180379 ['ENSG00000179218|ENST00000316448|CALR'] 64830 9891 LQDFFNGK True NCI_RA007_Epitope_Rep1 967.4763311916299 967.4752299358599 42.476 2 0.2155537907269603 0.00039635354736424893 0.0006675466254085146 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 38478 10870 HEQFIPIAA True H1975_Epitope_Rep3 1024.5341804209197 1024.53308993586 46.894 2 0.21554815348209452 0.00039635354736424893 0.0006676331978357201 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 112621 10298 TLEVEIEPGVR True H1975_Epitope_Rep3 1240.6663167892798 1240.66520993586 44.665 2 0.21554802975649015 0.00039635354736424893 0.0006676350980437628 ['ENSG00000090520|ENST00000265028|DNAJB11'] 62467 18255 LLIDDKGTIKL True PC9_epitope_Rep5 1227.74383883399 1227.74218490379 75.232 3 0.21551070904423714 0.00039635354736424893 0.0006682085264146307 ['ENSG00000170312|ENST00000395284|CDK1'] 54708 12994 KYLYVDKNF True PC9_epitope_Rep5 1188.6179100448796 1188.61627490379 54.991 3 0.21548149480309983 0.00039635354736424893 0.0006686577446017481 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 48171 10299 IYPPKLHQF True PC9_epitope_Rep6 1141.62841515893 1141.62676490379 50.304 3 0.2154812823675132 0.00039635354736424893 0.0006686610122663257 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 89518 8593 QYLEQSSKL True PC9_epitope_Rep4 1094.56078909158 1094.5596899358602 40.533 2 0.21547967033450888 0.00039635354736424893 0.0006686858089312454 ['ENSG00000176102|ENST00000323959|CSTF3'] 61938 11832 LLDISQKNLY True H1975_Epitope_Rep1 1205.66558851329 1205.66448993586 50.508 2 0.21547663090531624 0.00039635354736424893 0.0006687325646446496 ['nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 17979 4890 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 23.893 2 0.21547396544039316 0.00039635354736424893 0.0006687735703439085 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 8305 6083 ATILAGDVKVK True NCI_RA007_Epitope_Rep3 1113.6757592741699 1113.67466993586 30.91 2 0.21546817639417934 0.00039635354736424893 0.0006688626381267347 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2'] 100722 15203 SLDSQKFVTV True PC9_epitope_Rep1 1122.59208921986 1122.59098993586 63.298 2 0.21546660453255298 0.00039635354736424893 0.0006688868241702218 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'ENST00000558080.1_1_15:44865712-44867255:-|nuORF'] 26744 5800 FKDLGEEHFK True NCI_RA007_Epitope_Rep4 1248.6138872935996 1248.61225490379 28.935 3 0.21546610019723117 0.00039635354736424893 0.0006688945845023601 ['CON__P02769'] 47452 9917 IVNDFAYMK True NCI_RA007_Epitope_Rep4 1099.53721719603 1099.5361099358602 44.992 2 0.21545972117528758 0.00039635354736424893 0.0006689927478859554 ['ENSG00000170348|ENST00000303575|TMED10', 'ENST00000534816.1_1_8:146220430-146220868:+|nuORF', 'TMED10|p.R171G|1|0.21|ENSG00000170348|chr14:75135787-75135787|T/C|missense_variant', 'ENST00000555873.1_1_14:75601590-75605782:-|nuORF', 'ENST00000555036.1_1_14:75602424-75614456:-|nuORF', 'ENST00000556969.5_1_14:75601590-75614465:-|nuORF'] 118687 13413 TYTDVTPRQF True PC9_epitope_Rep1 1226.59315184902 1226.5920499358601 56.454 2 0.2154586891592503 0.00039635354736424893 0.0006690086303914298 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 72772 13195 M[Oxidation]NVLADALK True PC9_epitope_Rep2 989.52156751233 989.52046993586 56.032 2 0.21545383342674332 0.00039635354736424893 0.000669083364151178 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 138293 7281 YHDEADQSAL True PC9_epitope_Rep1 1147.47818166643 1147.47708993586 32.818 2 0.21544788299543835 0.00039635354736424893 0.0006691749576573517 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 46044 12015 ISGLIYEETR True PC9_epitope_Rep6 1179.6135529404298 1179.61244993586 57.502 2 0.21544582776869012 0.00039635354736424893 0.0006692065961734398 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 3071 9991 AFVTFDDHD True NCI_RA007_Epitope_Rep3 1065.4403396057298 1065.43924993586 46.388 2 0.21544260894976486 0.00039635354736424893 0.0006692561502448493 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 22012 7270 ESIEIINK True H1975_Epitope_Rep3 944.51786165044 944.51676993586 32.938 2 0.21541283668871838 0.00039635354736424893 0.000669714672030851 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 133089 10033 VVQDGITLITK True NCI_RA007_Epitope_Rep5 1185.69688864157 1185.6957899358601 45.231 2 0.2154061636541089 0.00039635354736424893 0.0006698174864891167 ['ENSG00000079246|ENST00000392132|XRCC5'] 141396 7687 YTEKNGQLIY True H1975_Epitope_Rep2 1227.6135529404298 1227.61244993586 34.52 2 0.2154037179986376 0.00039635354736424893 0.0006698551717731976 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 17019 6561 EGDLIAAQAR True NCI_RA007_Epitope_Rep2 1042.54072235334 1042.5396299358601 30.133 2 0.21539014196718695 0.00039635354736424893 0.000670064404519616 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 30166 16909 FYPYGLQTF True NCI_RA007_Epitope_Rep4 1134.53859709502 1134.53750993586 73.269 2 0.21538565543068391 0.00039635354736424893 0.0006701335650881531 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 40048 8983 HPTEDLVVSA True PC9_epitope_Rep6 1066.5294889632999 1066.52838993586 44.575 2 0.2153731713969137 0.00039635354736424893 0.0006703260458560749 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 8153 8427 ATELVKPGVY True H1975_Epitope_Rep2 1075.5913609438699 1075.59026993586 37.366 2 0.21537137743191206 0.00039635354736424893 0.0006703537100445435 ['ENSG00000174373|ENST00000680220|RALGAPA1'] 46682 8955 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.54912993586 39.441 2 0.21536650038314797 0.00039635354736424893 0.0006704289233200077 ['ENSG00000170348|ENST00000303575|TMED10'] 65821 6702 LSDKNIEQY True H1975_Epitope_Rep2 1108.540053647 1108.53947496793 30.69 1 0.21534468420673608 0.00039635354736424893 0.000670765473504816 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 128930 10480 VQIEEVRQV True PC9_epitope_Rep2 1098.6033226098998 1098.6022299358601 45.629 2 0.21534054540768885 0.00039635354736424893 0.0006708293403730381 ['ENSG00000143621|ENST00000361891|ILF2'] 72485 6645 MLDHQPPQY True H1975_Epitope_Rep1 1127.50697969691 1127.50588993586 30.613 2 0.21533477914875318 0.00039635354736424893 0.0006709183311637716 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 120918 6443 VENSSTAIGIR True NCI_RA007_Epitope_Rep1 1145.6040508858898 1145.6029499358601 29.083 2 0.21533157759789542 0.00039635354736424893 0.0006709677458767697 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000553665.5_1_14:58711638-58724717:+|nuORF'] 118064 13178 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.5429699358601 59.108 2 0.21532348137878196 0.00039635354736424893 0.000671092724216554 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 76929 8292 NRDQYSHLL True PC9_epitope_Rep4 1144.56252042708 1144.56088490379 39.355 3 0.21530681231522544 0.00039635354736424893 0.000671350111939555 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 4224 10852 AIDEDVLRY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 46.701 2 0.2153068095394172 0.00039635354736424893 0.0006713501548091761 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 68308 12761 LTEKELLLY True H1975_Epitope_Rep2 1120.63797678312 1120.6368699358602 54.189 2 0.2152968406553387 0.00039635354736424893 0.0006715041321123256 ['ENSG00000101400|ENST00000217381|SNTA1'] 107232 4372 SVITTSAPNK True NCI_RA007_Epitope_Rep4 1016.55022440788 1016.54912993586 23.165 2 0.21528280210937573 0.00039635354736424893 0.0006717210286499691 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 126028 10598 VLDVETGNEY True H1975_Epitope_Rep3 1137.51898384925 1137.51847496793 45.836 1 0.21527846152325467 0.00039635354736424893 0.0006717881052412843 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 140877 9720 YSEDHIIGAY True H1975_Epitope_Rep2 1166.5244035828598 1166.5233099358602 42.374 2 0.21527511337903046 0.00039635354736424893 0.0006718398498730897 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 76981 20640 NRFNYPFEL True PC9_epitope_Rep3 1198.5771078620598 1198.5760099358602 84.664 2 0.21527464561803555 0.00039635354736424893 0.0006718470793067003 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 71049 18973 LYKELGEYF True PC9_epitope_Rep4 1160.5753765265597 1160.57426993586 81.069 2 0.21526745156423718 0.00039635354736424893 0.0006719582761229045 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 128836 19104 VQDEFLEKL True PC9_epitope_Rep1 1119.5811901829898 1119.58008993586 78.273 2 0.21524847950872428 0.00039635354736424893 0.0006722516113411588 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 92108 15646 RLAQEGIYTL True PC9_epitope_Rep2 1162.6346227381798 1162.63352993586 65.457 2 0.21524606885467057 0.00039635354736424893 0.0006722888927126523 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2', 'ENST00000513888.5_1_5:6600041-6604993:-|nuORF'] 96053 11096 RYLQTLTTI True NCI_RA007_Epitope_Rep5 1107.62880908175 1107.6277099358601 49.317 2 0.21523304531174603 0.00039635354736424893 0.0006724903409609356 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 62055 10031 LLDTAQRALY True H1975_Epitope_Rep3 1162.6346227381798 1162.63352993586 43.619 2 0.21523162615252553 0.00039635354736424893 0.0006725122961842809 ['ENSG00000249471|ENST00000336614|ZNF324B', 'ENSG00000083812|ENST00000196482|ZNF324'] 35034 8242 GQVEIKTDL True NCI_RA007_Epitope_Rep4 1001.5393253710099 1001.53822993586 38.498 2 0.21523083322762776 0.00039635354736424893 0.0006725245635094774 ['ENSG00000123838|ENST00000367070|C4BPA'] 96055 18358 RYLQTLTTI True PC9_epitope_Rep3 1107.62880908175 1107.6277099358601 75.826 2 0.21521250644634798 0.00039635354736424893 0.0006728081593477994 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 101353 20508 SLITLIEKV True PC9_epitope_Rep4 1014.6324974798599 1014.63140993586 87.033 2 0.2152085945461412 0.00039635354736424893 0.0006728687091715809 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'CPD|p.R370H|1|0.26|ENSG00000108582|chr17:30420955-30420955|G/A|missense_variant'] 141702 17523 YTVEDIQRL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 72.408 2 0.21520680726341246 0.00039635354736424893 0.0006728963752077039 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 88594 11149 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51748993586 47.852 2 0.2152049292398619 0.00039635354736424893 0.0006729254470856086 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 62066 9248 LLDTPVKTQY True H1975_Epitope_Rep3 1176.63903941228 1176.6379499358602 40.564 2 0.21520483154357653 0.00039635354736424893 0.0006729269594624045 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2'] 18361 8794 EITALAPSTM[Oxidation]K True PC9_epitope_Rep2 1176.6060254122801 1176.6049299358601 39.18 2 0.21520360480359446 0.00039635354736424893 0.0006729459501685099 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48392 10237 IYTSSVNRL True PC9_epitope_Rep1 1051.56620882519 1051.5651099358602 44.258 2 0.21518391822662708 0.00039635354736424893 0.0006732507843233635 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 95768 12134 RYIANTVEL True PC9_epitope_Rep6 1077.58185888933 1077.5807699358602 58.023 2 0.21517611403247527 0.00039635354736424893 0.0006733716656633174 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 141656 9477 YTSYPM[Oxidation]HDFY True H1975_Epitope_Rep2 1338.5226897111402 1338.5215899358602 41.422 2 0.21517283001314316 0.00039635354736424893 0.0006734225392644106 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 106943 7640 SVDYGQTHYY True H1975_Epitope_Rep1 1231.51456717515 1231.51346993586 34.373 2 0.21516718362969958 0.00039635354736424893 0.0006735100178803905 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A', 'ENST00000557013.1_1_14:55168817-55201659:+|nuORF', 'ENST00000555112.1_1_14:55034634-55169324:+|nuORF'] 77353 5876 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep3 1278.5074335698198 1278.50632993586 27.613 2 0.21516387655485023 0.00039635354736424893 0.0006735612592153787 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 23985 20125 EYMEHVYLI True PC9_epitope_Rep5 1195.5583465634297 1195.55724993586 82.459 2 0.21515895744352087 0.00039635354736424893 0.0006736374854195652 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 77120 8568 NRMLAQQAV True PC9_epitope_Rep5 1029.53894853153 1029.53784993586 37.898 2 0.21514775861522728 0.00039635354736424893 0.0006738110539611441 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 93622 8489 RQPYAVSEL True NCI_RA007_Epitope_Rep5 1061.5505587610498 1061.54946993586 39.337 2 0.2151470825905375 0.00039635354736424893 0.0006738215329771349 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 44786 19089 IMLEALERV True PC9_epitope_Rep4 1072.59506642532 1072.59396993586 81.517 2 0.2151435619786008 0.00039635354736424893 0.0006738761084034528 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 127492 6872 VNLPINGNGKQ True NCI_RA007_Epitope_Rep4 1152.62512068364 1152.62402993586 33.051 2 0.21513863676943656 0.00039635354736424893 0.0006739524648994442 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 86338 9544 QIYGVFDEK True NCI_RA007_Epitope_Rep3 1097.53932537101 1097.53822993586 44.628 2 0.21513451903813477 0.00039635354736424893 0.0006740163095684307 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'nc|ENSG00000150712|Q9C0I1-3|MTMR12', 'MTMR12-ZFR|2|fusion'] 88624 13903 QTEEDYTLTMY True H1975_Epitope_Rep1 1392.5755127492 1392.57440993586 58.63 2 0.21512784338948338 0.00039635354736424893 0.0006741198271709482 ['nc|ENSG00000166206|P28472-3|GABRB3'] 88626 13870 QTEEDYTLTMY True H1975_Epitope_Rep3 1392.5755127492 1392.57440993586 58.66 2 0.21512119386498604 0.00039635354736424893 0.0006742229555310786 ['nc|ENSG00000166206|P28472-3|GABRB3'] 90591 9163 REMEENFAVEA True H1975_Epitope_Rep2 1323.57651580871 1323.57540993586 40.197 2 0.21512056204353144 0.00039635354736424893 0.0006742327553575461 ['ENSG00000026025|ENST00000544301|VIM'] 133097 7406 VVQEPGQVFK True NCI_RA007_Epitope_Rep4 1129.6131590176099 1129.61206993586 35.13 2 0.21511821281966878 0.00039635354736424893 0.0006742691940984006 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000570007.1_1_16:28117306-28117714:-|nuORF'] 18871 8557 ELDRQELTY True H1975_Epitope_Rep2 1165.56151736757 1165.5604299358602 37.871 2 0.21511605251586258 0.00039635354736424893 0.000674302704249882 ['ENSG00000154945|ENST00000285243|ANKRD40'] 136907 14393 YAFNMKATV True PC9_epitope_Rep4 1043.5110024481899 1043.5099099358602 63.272 2 0.21511324350299887 0.00039635354736424893 0.0006743462795307646 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 130949 4624 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57308490379 22.887 3 0.21510762333409705 0.00039635354736424893 0.000674433471820604 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 18866 10837 ELDRFMHYY True H1975_Epitope_Rep3 1272.55974354576 1272.55864993586 46.765 2 0.21509317444292306 0.00039635354736424893 0.000674657686388485 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF', 'ANKIB1|p.R604I|1|0.27|ENSG00000001629|chr7:92387856-92387856|G/T|missense_variant', 'ANKIB1|p.Q593P|1|0.23|ENSG00000001629|chr7:92387823-92387823|A/C|missense_variant'] 104251 11175 SQIDPSSIERA True PC9_epitope_Rep2 1201.5938801250102 1201.59278993586 48.312 2 0.21508483182408217 0.00039635354736424893 0.0006747871792838732 ['ENSG00000100393|ENST00000263253|EP300'] 140782 6196 YSDISGGGHPY True H1975_Epitope_Rep2 1151.48835242731 1151.48724993586 28.805 2 0.21506298617874614 0.00039635354736424893 0.000675126382319873 ['ENSG00000106771|ENST00000374586|TMEM245', 'nc|ENSG00000106771|Q9H330-3|TMEM245'] 24318 13672 EYVEKFYRI True PC9_epitope_Rep4 1245.6393737654498 1245.63772490379 60.48 3 0.2150587681206695 0.00039635354736424893 0.000675191896911521 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 129079 21428 VQPRNWLLF True PC9_epitope_Rep5 1171.6502132326698 1171.64910993586 87.486 2 0.2150538298384224 0.00039635354736424893 0.0006752686060817317 ['ENSG00000060762|ENST00000360961|MPC1'] 62722 23548 LLLPDYYLVTV True PC9_epitope_Rep2 1307.73769082439 1307.7365899358601 96.052 2 0.21505297310902946 0.00039635354736424893 0.0006752819150407848 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 29199 8083 FTSIGEDYDER True H1975_Epitope_Rep1 1330.5677249468197 1330.5666299358602 36.034 2 0.21504460323049365 0.00039635354736424893 0.0006754119517059366 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 12689 12682 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 53.837 2 0.21503210404422127 0.00039635354736424893 0.0006756061891739368 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 44530 8969 ILMEHIHKL True PC9_epitope_Rep4 1132.64268532408 1132.64104490379 42.05 3 0.21502778585319363 0.00039635354736424893 0.0006756733069269728 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 40225 12890 HQIEAVDGEEL True PC9_epitope_Rep1 1238.5778957076998 1238.57678993586 54.455 2 0.21502221510581307 0.00039635354736424893 0.0006757599030777646 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 125988 13643 VLDPYLLKY True H1975_Epitope_Rep2 1122.63249747986 1122.6314099358601 57.618 2 0.2150110131652031 0.00039635354736424893 0.0006759340687087986 ['ENSG00000239789|ENST00000285298|MRPS17'] 140095 19903 YQLPEILRT True PC9_epitope_Rep3 1131.6288090817498 1131.6277099358601 81.798 2 0.2150030377042552 0.00039635354736424893 0.0006760580970983454 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 21198 10686 ERDMSNVSL True PC9_epitope_Rep5 1049.48115887189 1049.48006993586 46.095 2 0.21499554584332328 0.00039635354736424893 0.0006761746257023967 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 29383 15399 FVDPLVTNY True H1975_Epitope_Rep2 1066.53351171458 1066.5324099358602 64.391 2 0.21499342042925926 0.00039635354736424893 0.000676207688118684 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 127430 12804 VNFTVDQIR True PC9_epitope_Rep6 1090.5771078620598 1090.5760099358602 60.751 2 0.2149929057474485 0.00039635354736424893 0.0006762156946257741 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 134140 18936 VYLDKFIRL True PC9_epitope_Rep4 1165.68593003505 1165.68482993586 80.925 2 0.21498933060400918 0.00039635354736424893 0.0006762713129939126 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 12713 7109 DLEAHIDSANK True PC9_epitope_Rep5 1211.57823006087 1211.57712993586 32.313 2 0.2149789114545339 0.00039635354736424893 0.0006764334294804338 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 6759 14820 AQDEHLITF True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 68.976 2 0.21497666920743366 0.00039635354736424893 0.0006764683227644695 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 133745 20609 VYDVVELKF True PC9_epitope_Rep5 1110.5961119711399 1110.5950099358602 84.321 2 0.21496988097734818 0.00039635354736424893 0.0006765739704997434 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 77640 8966 NTFSVVPSPK True NCI_RA007_Epitope_Rep1 1074.5709598524597 1074.5698699358602 38.877 2 0.21496537112048206 0.00039635354736424893 0.000676644168222532 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 94807 5775 RSQLVLVTK True NCI_RA007_Epitope_Rep4 1042.6498788795 1042.6487899358601 28.834 2 0.21495869054825711 0.00039635354736424893 0.0006767481674271456 ['PARP9|p.L655Afs*19|1|0.03|ENSG00000138496|chr3:122536982-122536983|-/GTTGGCTTTCAAAGAATGTACTCGACACCTTGCG|frameshift_variant', 'nc|ENSG00000138496|Q8IXQ6-3|PARP9', 'PARP9|p.Q816Mfs*23|1|0.05|ENSG00000138496|chr3:122528484-122528485|-/CCATC|frameshift_variant', 'ENSG00000138496|ENST00000682323|PARP9', 'nc|ENSG00000138496|Q8IXQ6|PARP9'] 16869 12179 EFGPVVIDYGK True H1975_Epitope_Rep1 1222.6233893481397 1222.6222899358602 51.865 2 0.2149578273628288 0.00039635354736424893 0.00067676160615827 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 106712 5556 STVGAGAYAYK True NCI_RA007_Epitope_Rep3 1086.53457434374 1086.53346993586 28.848 2 0.21495661889948342 0.00039635354736424893 0.0006767804208899949 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 22344 5178 ETDRGMSAEY True H1975_Epitope_Rep2 1157.46590273057 1157.46480993586 24.992 2 0.2149514052557908 0.00039635354736424893 0.0006768615988409239 ['ENSG00000100347|ENST00000350028|SAMM50'] 87900 11291 QRIIQQETL True PC9_epitope_Rep1 1127.62987171091 1127.6287699358602 48.311 2 0.2149501567706099 0.00039635354736424893 0.0006768810395686632 ['ENSG00000180182|ENST00000324817|MED14'] 97719 8018 SEIESVKISA True H1975_Epitope_Rep1 1061.56045473841 1061.5593499358602 35.785 2 0.21494992803878013 0.00039635354736424893 0.0006768846013162175 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU'] 84524 11411 QAQEVFFLK True NCI_RA007_Epitope_Rep3 1108.59169529704 1108.5905899358602 52.011 2 0.21492616170164092 0.00039635354736424893 0.0006772547865212346 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 104116 4755 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 23.381 2 0.21491925614114213 0.00039635354736424893 0.0006773623858264951 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 115893 11631 TSETPDYLLKY True H1975_Epitope_Rep1 1328.6499980188 1328.64890993586 49.729 2 0.21490504757021667 0.00039635354736424893 0.0006775838312769292 ['ENSG00000105656|ENST00000262809|ELL'] 98340 10970 SEYERIEIP True H1975_Epitope_Rep2 1134.5557037111398 1134.55460993586 47.225 2 0.21490323896911806 0.00039635354736424893 0.000677612024156259 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3'] 18712 15123 ELALVDVLEDK True H1975_Epitope_Rep3 1242.67073346338 1242.66962993586 63.57 2 0.21489511931469005 0.00039635354736424893 0.0006777386096533603 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 138381 14447 YHGEVPVSL True PC9_epitope_Rep5 999.5025459394699 999.50144993586 60.572 2 0.21489043905871782 0.00039635354736424893 0.0006778115856721832 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 24102 16766 EYPDRIMNTF True PC9_epitope_Rep6 1284.5808729131597 1284.5797699358602 76.982 2 0.21488422251661138 0.00039635354736424893 0.0006779085281369887 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 66108 10610 LSELEAALQR True NCI_RA007_Epitope_Rep2 1128.6138872935999 1128.61278993586 45.869 2 0.2148814292274824 0.00039635354736424893 0.0006779520919843966 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 14308 5444 DSYESYGNSR True NCI_RA007_Epitope_Rep1 1176.4683452587199 1176.46724993586 25.248 2 0.21487464363576206 0.00039635354736424893 0.0006780579310687561 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 24320 15453 EYVEKFYRI True PC9_epitope_Rep5 1245.6393737654498 1245.63772490379 64.451 3 0.2148744829417446 0.00039635354736424893 0.0006780604377139944 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 71008 17913 LYIGWDKHYGF True PC9_epitope_Rep6 1397.67682190333 1397.6751749037899 81.527 3 0.21487226370206228 0.00039635354736424893 0.0006780950562982257 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 69670 7975 LVDTAGQDEY True H1975_Epitope_Rep3 1109.48768372097 1109.4865899358601 35.648 2 0.21487149010845163 0.00039635354736424893 0.0006781071242333918 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 12097 10377 DHYLGKEMV True PC9_epitope_Rep1 1090.5117307241799 1090.5106299358602 44.799 2 0.21486852740262816 0.00039635354736424893 0.0006781533439579008 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 559 9801 [Acetylation]-AAQGEPQVQFK True H1975_Epitope_Rep3 1243.6197012663295 1243.6186099358601 42.726 2 0.21486253948498768 0.00039635354736424893 0.0006782467681826098 ['ENSG00000132341|ENST00000543796|RAN'] 26168 18464 FHDDWISSI True PC9_epitope_Rep6 1118.5032742154601 1118.5021699358601 83.662 2 0.2148572202058142 0.00039635354736424893 0.000678329771058953 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 107774 8753 SVSTVLTSKY True NCI_RA007_Epitope_Rep4 1083.58119018299 1083.58008993586 40.465 2 0.21485692048534236 0.00039635354736424893 0.0006783344482480578 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 99832 11015 SILEDYANYK True NCI_RA007_Epitope_Rep4 1214.5819184589798 1214.58082993586 49.237 2 0.21484082641323615 0.00039635354736424893 0.0006785856465136279 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 90936 10450 REYQELMSV True NCI_RA007_Epitope_Rep2 1153.54375912845 1153.5426699358602 45.242 2 0.2148406581922156 0.00039635354736424893 0.0006785882726209161 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 22232 8846 ESYSVYVYK True H1975_Epitope_Rep3 1136.5389910178399 1136.5378899358602 39.032 2 0.214803132651278 0.00039635354736424893 0.0006791743407524205 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 116286 13242 TTDLFGRDLSY True H1975_Epitope_Rep2 1286.6142812164198 1286.6131899358602 56.064 2 0.2147839741811934 0.00039635354736424893 0.0006794737505958611 ['ENSG00000169813|ENST00000682386|HNRNPF'] 73286 9649 MTDDKITEV True PC9_epitope_Rep5 1050.49032657326 1050.48922993586 42.081 2 0.21478182356413159 0.00039635354736424893 0.0006795073688486765 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.E1969K|1|0.23|ENSG00000148773|chr10:128105935-128105935|C/T|missense_variant'] 6815 13041 AQEYEALLNIK True NCI_RA007_Epitope_Rep1 1290.6819668534197 1290.68086993586 54.718 2 0.21477680720435874 0.00039635354736424893 0.0006795857906206742 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 10136 13916 AYVHMVTHF True PC9_epitope_Rep3 1103.52223583823 1103.52112993586 58.609 2 0.21477309150961893 0.00039635354736424893 0.0006796438846861096 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 101693 10659 SLMHSFILK True NCI_RA007_Epitope_Rep4 1074.5895871220598 1074.58848993586 47.848 2 0.2147694691261795 0.00039635354736424893 0.0006797005246466217 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 127148 9043 VLTVINQTQK True PC9_epitope_Rep1 1142.66592286646 1142.66482993586 39.636 2 0.2147660122513015 0.00039635354736424893 0.0006797545811146014 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 93536 15631 RQLESMIRL True PC9_epitope_Rep1 1144.6386625727998 1144.63702490379 64.944 3 0.21476120520143718 0.00039635354736424893 0.0006798297579523293 ['ENSG00000076003|ENST00000264156|MCM6', 'MCM6|p.E629V|1|0.33|ENSG00000076003|chr2:135851433-135851433|T/A|missense_variant'] 18355 6324 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep3 1176.6060254122801 1176.6049299358601 31.879 2 0.21476074807191234 0.00039635354736424893 0.0006798369073768191 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 17438 6752 EHDTTEYKL True PC9_epitope_Rep3 1134.51931820242 1134.51766490379 30.994 3 0.21474664659749818 0.00039635354736424893 0.0006800574889900243 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 89664 15535 QYVDFHNQL True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 64.765 2 0.21471394124506288 0.00039635354736424893 0.0006805693572903516 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 137515 6903 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 31.472 2 0.21470930893051537 0.00039635354736424893 0.000680641888442991 ['ENSG00000127184|ENST00000247655|COX7C'] 85748 18123 QHDFTSQIF True PC9_epitope_Rep1 1121.51417325233 1121.5130699358601 74.501 2 0.2146949168222893 0.00039635354736424893 0.0006808672844983259 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 7886 6927 ATAGIIGVNR True NCI_RA007_Epitope_Rep4 970.5559784946599 970.55488993586 33.267 2 0.21468836655698556 0.00039635354736424893 0.0006809698935686705 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 26526 13107 FIGNLNTLVVK True NCI_RA007_Epitope_Rep1 1216.71795843932 1216.7168699358601 54.978 2 0.21468752826084075 0.00039635354736424893 0.0006809830264906554 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 30230 20026 FYTVIPHNF True PC9_epitope_Rep1 1136.5654805492 1136.5643899358602 81.857 2 0.2146866723375465 0.00039635354736424893 0.0006809964358254303 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 35624 13016 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 55.185 2 0.2146761576124187 0.00039635354736424893 0.0006811611865393956 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 12111 9525 DIAVDGEPLGR True H1975_Epitope_Rep3 1140.5775017848798 1140.57640993586 41.644 2 0.21467282025070997 0.00039635354736424893 0.000681213486587666 ['ENSG00000196262|ENST00000468812|PPIA', 'ENST00000355968.10_1_7:44836323-44838373:+|nuORF'] 135132 15085 WEHWGGILP True H1975_Epitope_Rep2 1093.5345147740898 1093.5334099358602 63.176 2 0.2146646404709921 0.00039635354736424893 0.0006813416895755465 ['nc|ENSG00000130731|Q96S19-6|METTL26', 'ENSG00000130731|ENST00000301686|METTL26', 'nc|ENSG00000130731|Q96S19-4|METTL26', 'ENST00000448973.6_1_16:685482-685995:-|nuORF'] 74042 9091 NDLAVVDVR True NCI_RA007_Epitope_Rep1 999.53490869691 999.53380993586 39.363 2 0.2146547976608649 0.00039635354736424893 0.0006814959895949788 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 24239 7195 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56899490379 32.641 3 0.21464361524078798 0.00039635354736424893 0.0006816713324448857 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 118981 7580 VAEENTRVL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 34.104 2 0.21464137920885412 0.00039635354736424893 0.000681706399356265 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-4|USP16', 'ENST00000485067.1_1_21:30426080-30426505:+|nuORF'] 74502 13556 NFGIGQDIQPK True PC9_epitope_Rep2 1215.62478633047 1215.62368993586 57.435 2 0.21464096223902507 0.00039635354736424893 0.0006817129387493449 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 10126 8337 AYVHMVTHF True NCI_RA007_Epitope_Rep3 1103.52223583823 1103.52112993586 39.909 2 0.2146217987837252 0.00039635354736424893 0.0006820135496855903 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 137138 17996 YAVDAYFREA True PC9_epitope_Rep5 1203.55603806431 1203.5549499358601 74.238 2 0.21462036539765258 0.00039635354736424893 0.0006820360400955812 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 14356 4570 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 24.075 2 0.21461938774332676 0.00039635354736424893 0.0006820513803161187 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 23873 12331 EYIQKNVQL True PC9_epitope_Rep1 1133.6080736371698 1133.6069699358602 52.288 2 0.2146188220627407 0.00039635354736424893 0.0006820602564794847 ['ENSG00000126067|ENST00000373237|PSMB2'] 92149 13805 RLEIEPEWAY True H1975_Epitope_Rep1 1304.64010204144 1304.63900993586 58.247 2 0.21460559114962768 0.00039635354736424893 0.000682267897418628 ['ENSG00000100442|ENST00000396062|FKBP3'] 60898 12061 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 54.199 2 0.21458546504938295 0.00039635354736424893 0.0006825838704351502 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 109132 9642 TALVELVK True H1975_Epitope_Rep3 871.5378688190299 871.53676993586 42.104 2 0.21458068220689822 0.00039635354736424893 0.0006826589810454434 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 127171 10411 VLVDQTTGLSR True PC9_epitope_Rep2 1187.65100107831 1187.64990993586 45.368 2 0.21454676686677313 0.00039635354736424893 0.0006831918315331562 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 54050 9173 KVIDPATATSV True PC9_epitope_Rep6 1100.607739284 1100.60664993586 45.41 2 0.21454405039005683 0.00039635354736424893 0.0006832345286723323 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 14742 9241 DVNAAIATIK True NCI_RA007_Epitope_Rep4 1014.57095985246 1014.56986993586 42.399 2 0.2145436281029414 0.00039635354736424893 0.0006832411663529733 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 139247 11881 YLHSQVVSV True PC9_epitope_Rep1 1030.5447451046198 1030.54364993586 50.566 2 0.21454073759909476 0.00039635354736424893 0.0006832866022052762 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 131037 4987 VTDRSDARLQY True H1975_Epitope_Rep3 1322.6578773638998 1322.6562449037901 24.311 3 0.21452912443754232 0.00039635354736424893 0.0006834691801413693 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 73823 18992 NALDKVLSV True PC9_epitope_Rep3 957.54949613189 957.54838993586 78.275 2 0.21452772868175088 0.00039635354736424893 0.0006834911270051466 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 71835 18910 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep1 1146.62061316356 1146.6195099358602 78.852 2 0.214522785825988 0.00039635354736424893 0.0006835688541541746 ['ENSG00000108424|ENST00000290158|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant'] 1792 10838 AEHGIFLPP True H1975_Epitope_Rep2 979.51271670035 979.51160993586 46.717 2 0.21451354885174634 0.00039635354736424893 0.0006837141307343668 ['ENSG00000159079|ENST00000290155|CFAP298'] 138067 14620 YGEPSEVFINR True PC9_epitope_Rep2 1309.6302656337298 1309.62916993586 61.504 2 0.21450991985160284 0.00039635354736424893 0.0006837712151222793 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 134558 19220 VYSEAARVLQF True PC9_epitope_Rep2 1281.67173652289 1281.67062993586 79.302 2 0.2145061662005558 0.00039635354736424893 0.0006838302653075048 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 80184 21149 PFVDHVFTF True PC9_epitope_Rep5 1107.53893144819 1107.5378299358601 86.406 2 0.2144762726528673 0.00039635354736424893 0.0006843007153220665 ['ENSG00000113460|ENST00000336767|BRIX1'] 140810 12181 YSDLHAFYY True H1975_Epitope_Rep3 1177.5080252427301 1177.5069299358602 52.026 2 0.21447464525588492 0.00039635354736424893 0.0006843263358172168 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 118075 20140 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 82.298 2 0.2144732584791036 0.00039635354736424893 0.0006843481689312063 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 85223 9145 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 40.166 2 0.21446702177864652 0.00039635354736424893 0.0006844463668352407 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 31688 7915 GEFTIETEGK True NCI_RA007_Epitope_Rep2 1109.52406922969 1109.5229699358601 35.421 2 0.2144467947507722 0.00039635354736424893 0.0006847649421012089 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1'] 40837 8560 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48724993586 37.882 2 0.21443331464414914 0.00039635354736424893 0.0006849773361083453 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 77571 10117 NTDPSIVM[Oxidation]TY True H1975_Epitope_Rep1 1155.51179067427 1155.51068993586 43.851 2 0.2144311852729951 0.00039635354736424893 0.0006850108927535693 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 95857 18827 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.6263299358602 77.642 2 0.21442403218434444 0.00039635354736424893 0.0006851236299692788 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 28972 13412 FTDVNSILRY True H1975_Epitope_Rep2 1226.62953735774 1226.62844993586 56.724 2 0.21442026713043633 0.00039635354736424893 0.0006851829770856084 ['ENSG00000136628|ENST00000366923|EPRS1'] 43357 6470 IGAEVYHNLK True NCI_RA007_Epitope_Rep2 1142.60840799034 1142.60730993586 29.775 2 0.21441615880277518 0.00039635354736424893 0.0006852477409806879 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 96286 11145 RYQTQPVTL True PC9_epitope_Rep5 1104.5927579261997 1104.5916699358602 47.854 2 0.21438328398884338 0.00039635354736424893 0.0006857662025543242 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 90932 9845 REYQELMSV True H1975_Epitope_Rep1 1153.54375912845 1153.5426699358602 42.799 2 0.21437292430868432 0.00039635354736424893 0.000685929664368868 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 126222 7495 VLGM[Oxidation]DPLPSK True H1975_Epitope_Rep3 1071.56343232431 1071.5623299358601 33.812 2 0.2143636086622272 0.00039635354736424893 0.0006860766861183171 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 87310 10045 QPQPQPYAV True PC9_epitope_Rep6 1026.5134449763398 1026.5123499358601 49.219 2 0.21435163196436047 0.00039635354736424893 0.0006862657516707108 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 88048 12526 QRQDIAFAY True PC9_epitope_Rep6 1110.5458077337798 1110.54470993586 59.615 2 0.214349512766736 0.00039635354736424893 0.0006862992110149594 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 17357 21616 EHDDFFISL True PC9_epitope_Rep5 1121.50293986229 1121.50184993586 88.186 2 0.21434346043021593 0.00039635354736424893 0.0006863947784639593 ['ENSG00000125676|ENST00000245838|THOC2'] 140838 16740 YSDPNQIWIY True H1975_Epitope_Rep2 1297.59790287629 1297.5968099358602 69.625 2 0.21432083661920628 0.00039635354736424893 0.0006867521306397479 ['ENSG00000178234|ENST00000430044|GALNT11'] 118445 11007 TYPIKTPTF True NCI_RA007_Epitope_Rep4 1066.5698972233001 1066.5688099358601 49.206 2 0.21431655602718674 0.00039635354736424893 0.000686819765306516 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 2353 5300 AEQAERYDDM True H1975_Epitope_Rep3 1226.48736645114 1226.48626993586 25.465 2 0.214304668392762 0.00039635354736424893 0.0006870076286298603 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 106538 15691 STLTEEGVIKV True PC9_epitope_Rep1 1174.64451871554 1174.64342993586 65.177 2 0.21429933650434038 0.00039635354736424893 0.000687091906571952 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 71811 11694 MEHPYFYTV True H1975_Epitope_Rep1 1185.5164817514499 1185.5153899358602 49.972 2 0.21429796207608304 0.00039635354736424893 0.0006871136330114131 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 142502 21003 YYIFIPSKF True PC9_epitope_Rep2 1176.6219327961599 1176.62082993586 86.241 2 0.21428771586670659 0.00039635354736424893 0.0006872756229194677 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 35625 13110 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 55.55 2 0.2142862733436944 0.00039635354736424893 0.0006872984319102871 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 12133 11103 DIDISSPEFK True H1975_Epitope_Rep1 1149.55536935797 1149.55426993586 47.672 2 0.21427331310376102 0.00039635354736424893 0.0006875033916477601 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 132498 12131 VVDLLAPYAK True H1975_Epitope_Rep3 1087.62774645259 1087.62664993586 51.829 2 0.21426959750318295 0.00039635354736424893 0.0006875621633298609 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 17629 17504 EHIPNSPFHVL True PC9_epitope_Rep5 1288.65642081192 1288.65478490379 72.332 3 0.21426891527580078 0.00039635354736424893 0.0006875729550404279 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 41433 17080 HYILHNSFF True PC9_epitope_Rep2 1176.5716285587998 1176.5705299358601 70.949 2 0.21426672397586416 0.00039635354736424893 0.000687607618936354 ['ENSG00000163659|ENST00000295924|TIPARP'] 111139 17696 THFIQAGLLSA True PC9_epitope_Rep4 1156.62405805448 1156.62296993586 76.093 2 0.21426057933858444 0.00039635354736424893 0.0006877048295267623 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 108367 11168 SYLENVDHF True NCI_RA007_Epitope_Rep3 1122.49818883502 1122.49708993586 51.034 2 0.21425828135466235 0.00039635354736424893 0.000687741188083278 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 88532 19498 QTAPEEAFIKL True PC9_epitope_Rep3 1245.6605031328497 1245.6594099358601 80.23 2 0.21425770729684887 0.00039635354736424893 0.0006877502710908308 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 21228 8637 ERDPQSPEF True PC9_epitope_Rep5 1103.4883524273098 1103.48724993586 38.165 2 0.21425137879979733 0.00039635354736424893 0.0006878504114682197 ['MSANTD4|p.E277Vfs*13|1|0.06|ENSG00000170903|chr11:106009731-106009743|CCAAGTTCATTTT/-|frameshift_variant', 'ENSG00000170903|ENST00000301919|MSANTD4'] 78684 20330 NYYKVNWTF True PC9_epitope_Rep3 1233.5818588893296 1233.5807699358602 83.449 2 0.21424759733252324 0.00039635354736424893 0.0006879102553371368 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 78422 14539 NYLSHHLTI True PC9_epitope_Rep3 1096.5665431783602 1096.5654499358602 61.046 2 0.21423964222313166 0.00039635354736424893 0.0006880361665194155 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 14845 16727 DVVLTQTPLSL True NCI_RA007_Epitope_Rep3 1184.6652541601197 1184.66414993586 73.631 2 0.21423467326358792 0.00039635354736424893 0.0006881148255133003 ['CON__Q05B55'] 54782 20561 KYNDNFFGL True PC9_epitope_Rep5 1116.5240096600398 1116.52290993586 84.132 2 0.21422135570265907 0.00039635354736424893 0.0006883256879786684 ['ENSG00000012963|ENST00000013070|UBR7'] 26837 11302 FLDASGAKLDY True H1975_Epitope_Rep1 1198.5870038394198 1198.5859099358602 48.45 2 0.21420093316022826 0.00039635354736424893 0.0006886491725089505 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 99363 10092 [Acetylation]-SHTILLVQPTK True H1975_Epitope_Rep3 1277.7343370957499 1277.7332299358602 43.86 2 0.21419952131066905 0.00039635354736424893 0.0006886715412515219 ['ENSG00000100632|ENST00000557016|ERH'] 28192 13574 FREDQIYRI True PC9_epitope_Rep2 1238.64077074778 1238.6391149037902 57.505 3 0.21419231384886656 0.00039635354736424893 0.000688785744564444 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 29703 21818 FVLPVATQI True PC9_epitope_Rep2 986.58006798418 986.57896993586 89.396 2 0.21418457852328984 0.00039635354736424893 0.0006889083330982005 ['ENSG00000111678|ENST00000229281|C12orf57'] 54611 16636 KYLDEDTIYHL True PC9_epitope_Rep4 1408.68744615668 1408.68634993586 71.958 2 0.21417720185802555 0.00039635354736424893 0.0006890252580171116 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 95363 17913 RVVDYLTKL True PC9_epitope_Rep5 1105.64954452633 1105.64844993586 73.92 2 0.21417506315933477 0.00039635354736424893 0.0006890591614987237 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 140957 8221 YSEYPPFSHRY True H1975_Epitope_Rep3 1444.6411646706 1444.63951490379 36.605 3 0.2141748439099553 0.00039635354736424893 0.0006890626372195594 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 74969 8598 NHNSQVWRV True PC9_epitope_Rep3 1138.5631891334199 1138.56154490379 38.022 3 0.2141721099555977 0.00039635354736424893 0.0006891059795817689 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 41064 4527 HTLNQIDSVK True PC9_epitope_Rep4 1153.6091362663299 1153.60802993586 23.902 2 0.21415487516499657 0.00039635354736424893 0.0006893792718992679 ['CON__P12763'] 108342 9029 SYLDRTEQL True NCI_RA007_Epitope_Rep4 1123.55095268387 1123.54984993586 41.562 2 0.21415172101227234 0.00039635354736424893 0.0006894292991142058 ['ENSG00000065268|ENST00000585809|WDR18'] 103152 10168 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 46.787 2 0.21413636795417845 0.00039635354736424893 0.0006896728620890055 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 8583 10267 [Acetylation]-ATVQQLEGR True NCI_RA007_Epitope_Rep1 1042.54072266964 1042.5396299358601 43.946 2 0.21413625020705362 0.00039635354736424893 0.0006896747303787601 ['ENSG00000164687|ENST00000297258|FABP5'] 84343 14973 PYVNNVPHL True PC9_epitope_Rep1 1051.54507945779 1051.54398993586 62.414 2 0.21413471356430122 0.00039635354736424893 0.0006896991127042968 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 28535 13915 FSELDENLEY True H1975_Epitope_Rep2 1257.5401132166498 1257.5390099358601 58.672 2 0.21412768707446672 0.00039635354736424893 0.000689810614935654 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 119861 5716 VDFNSEEDAK True NCI_RA007_Epitope_Rep2 1152.4934973774 1152.49240993586 26.85 2 0.21411833348251608 0.00039635354736424893 0.0006899590736382626 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 12688 12587 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 53.465 2 0.21411105781407316 0.00039635354736424893 0.0006900745740397383 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 7956 5520 ATAVM[Oxidation]PDGQFK True H1975_Epitope_Rep3 1179.5594095730296 1179.55830993586 26.28 2 0.21410751233607273 0.00039635354736424893 0.0006901308651259683 ['ENSG00000117450|ENST00000319248|PRDX1'] 62473 20200 LLIDELNKL True PC9_epitope_Rep4 1069.63831113629 1069.63720993586 85.837 2 0.214105336606129 0.00039635354736424893 0.0006901654111841639 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 61973 9667 LLDPAQKNLY True H1975_Epitope_Rep3 1173.63937376545 1173.63826993586 42.203 2 0.21409493246013334 0.00039635354736424893 0.0006903306313319926 ['ENST00000593242.7_1_19:9488987-9489811:+|nuORF', 'ENST00000605093.5_1_19:9488987-9490339:+|nuORF', 'nc|ENSG00000188629|Q13360-3|ZNF177', 'ZNF559-ZNF177|p.Y424Mfs*16|1|0.05|ENSG00000270011|chr19:9381599-9381599|C/-|frameshift_variant', 'ENSG00000270011|ENST00000541595|ZNF559-ZNF177', 'ENSG00000188629|ENST00000683217|ZNF177'] 71918 6108 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep2 1282.5975859869 1282.59648993586 28.472 2 0.21408072840859146 0.00039635354736424893 0.0006905562588971599 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 22121 4231 ESQSPDTTIQR True NCI_RA007_Epitope_Rep2 1260.594608401 1260.59350993586 21.095 2 0.21407320521569784 0.00039635354736424893 0.0006906757927781195 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000513944.5_1_5:72144220-72147067:+|nuORF', 'ENST00000518279.5_1_5:72112751-72147067:+|nuORF'] 24043 15808 EYNNNFHVL True PC9_epitope_Rep1 1148.5250722892001 1148.5239699358601 65.618 2 0.2140725856964171 0.00039635354736424893 0.0006906856370696069 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 104262 17073 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 73.668 2 0.21407231628857726 0.00039635354736424893 0.0006906899180606873 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 137543 16619 YEELNVWQV True H1975_Epitope_Rep2 1178.5607890915799 1178.5596899358602 69.158 2 0.21407213165330963 0.00039635354736424893 0.0006906928519993444 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 84240 20967 PYMDSPQSIGF True PC9_epitope_Rep3 1240.5434247752798 1240.5423299358602 85.929 2 0.2140718064962766 0.00039635354736424893 0.0006906980189233781 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 90945 7256 REYQELM[Oxidation]SV True NCI_RA007_Epitope_Rep5 1169.5386741284499 1169.5375699358601 34.587 2 0.21407036751099615 0.00039635354736424893 0.0006907208856562652 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 69616 9303 LVDPASHTLY True H1975_Epitope_Rep1 1114.56587447202 1114.56476993586 40.693 2 0.21406111493911903 0.00039635354736424893 0.0006908679352492011 ['nc|ENSG00000135622|O95754-2|SEMA4F', 'ENSG00000135622|ENST00000357877|SEMA4F'] 17937 10508 EIAQEFKTDLR True PC9_epitope_Rep6 1348.6986795467199 1348.6970249037902 51.202 3 0.21405508970070516 0.00039635354736424893 0.0006909637102522602 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 40956 13489 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.5240299358602 57.019 2 0.21405237625300957 0.00039635354736424893 0.0006910068465824596 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 19431 9217 ELNEALELK True H1975_Epitope_Rep3 1057.5655401188499 1057.56444993586 40.445 2 0.21404810156748402 0.00039635354736424893 0.0006910748077668693 ['ENSG00000141510|ENST00000269305|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-7|TP53'] 48103 20683 IYNGKLFDLL True PC9_epitope_Rep4 1194.6648602373 1194.66376993586 87.717 2 0.2140477197861807 0.00039635354736424893 0.0006910808778517614 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 61724 4566 LLADQAEAR True NCI_RA007_Epitope_Rep5 985.51925863277 985.51816993586 24.223 2 0.21404074826938882 0.00039635354736424893 0.0006911917300335106 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000424919.1_1_X:150162237-150162561:+|nuORF'] 11665 13505 DGQFSVLFTK True H1975_Epitope_Rep1 1140.5815245361598 1140.58097496793 57.066 1 0.2140383005987833 0.00039635354736424893 0.0006912306540056318 ['CON__P12763'] 45837 9778 ISDLIRDSY True H1975_Epitope_Rep3 1080.54513902744 1080.5440499358601 42.634 2 0.2140382859978977 0.00039635354736424893 0.0006912308862021588 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 88544 11383 QTDADFYQQY True H1975_Epitope_Rep1 1277.52004647841 1277.51894993586 48.764 2 0.2140279714929813 0.00039635354736424893 0.0006913949363723192 ['nc|ENSG00000116809|Q13105-3|ZBTB17', 'ENSG00000116809|ENST00000375743|ZBTB17', 'nc|ENSG00000116809|Q13105-2|ZBTB17'] 118007 18394 TYDYNFHSF True PC9_epitope_Rep1 1192.48253877088 1192.4814499358602 75.543 2 0.21401137842190698 0.00039635354736424893 0.0006916589278742691 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 17432 6852 EHDTTEYKL True PC9_epitope_Rep1 1134.51931820242 1134.51766490379 31.163 3 0.2139946178398832 0.00039635354736424893 0.0006919256871036274 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 118067 13455 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 58.954 2 0.2139943783967333 0.00039635354736424893 0.0006919294987972468 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 24298 20321 EYTRALFLL True PC9_epitope_Rep4 1124.62299542532 1124.62188993586 86.307 2 0.21398461435144175 0.00039635354736424893 0.0006920849505047659 ['ENSG00000129933|ENST00000262815|MAU2'] 66115 15516 LSELEAALQR True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 64.692 2 0.21398299232041354 0.00039635354736424893 0.0006921107779792405 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 113581 14135 TLVEAIKQV True PC9_epitope_Rep4 999.5964463243098 999.59534993586 62.273 2 0.2139820425821209 0.00039635354736424893 0.0006921259010374234 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 116352 8009 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51748993586 35.779 2 0.21397191969987642 0.00039635354736424893 0.0006922871122934578 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 67864 18423 LTAPEDVFSKL True PC9_epitope_Rep6 1218.6496040959798 1218.6485099358601 83.509 2 0.2139562241185517 0.00039635354736424893 0.0006925371456774864 ['ENSG00000155561|ENST00000285968|NUP205'] 20795 10359 EQIEAGTPGRL True PC9_epitope_Rep1 1169.6040508858898 1169.6029499358601 44.728 2 0.21393838744919488 0.00039635354736424893 0.0006928213969623143 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 49077 5808 KEIEELQSQA True NCI_RA007_Epitope_Rep4 1173.58773211541 1173.5866299358602 28.965 2 0.21393232170556825 0.00039635354736424893 0.0006929180894054255 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 95295 6841 RVQEAVESMVK True NCI_RA007_Epitope_Rep4 1274.66527124346 1274.6641699358602 32.934 2 0.2139210452951275 0.00039635354736424893 0.0006930978797177023 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 41309 15159 HVVDFFNRV True PC9_epitope_Rep4 1131.58252759567 1131.5814299358601 66.236 2 0.21391254550510594 0.00039635354736424893 0.0006932334307211245 ['ENSG00000172081|ENST00000357066|MOB3A'] 130953 4485 VTDKSMVDKY True H1975_Epitope_Rep3 1184.5747249035599 1184.57362993586 22.369 2 0.2139122261654713 0.00039635354736424893 0.0006932385239309619 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 126359 19725 VLITTDLLAR True PC9_epitope_Rep1 1113.6757592741699 1113.67466993586 80.7 2 0.21390974735040072 0.00039635354736424893 0.0006932780603106541 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000461021.1_1_3:186505247-186505672:+|nuORF', 'ENST00000494445.1_1_3:186505247-186506105:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1'] 71297 20675 LYQDKFPFF True PC9_epitope_Rep4 1203.5964463243097 1203.5953499358602 87.684 2 0.21390955102513198 0.00039635354736424893 0.0006932811917382951 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 78683 19967 NYYKVNWTF True PC9_epitope_Rep2 1233.5818588893296 1233.5807699358602 82.203 2 0.21390896669318196 0.00039635354736424893 0.0006932905120347518 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 26926 10057 FLDKSGLQGY True H1975_Epitope_Rep2 1126.56587447202 1126.56476993586 43.676 2 0.21390861589497112 0.00039635354736424893 0.0006932961074477868 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM'] 139952 10966 YQAVTATLEEK True PC9_epitope_Rep1 1251.63468230783 1251.63358993586 47.069 2 0.21389056933050055 0.00039635354736424893 0.0006935840206224372 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 23932 16481 EYLIVFPKL True NCI_RA007_Epitope_Rep3 1120.6532329244399 1120.65212993586 72.615 2 0.2138854035541372 0.00039635354736424893 0.0006936664570097963 ['ENSG00000198060|ENST00000358935|MARCHF5'] 97933 7049 SENEYIMKA True H1975_Epitope_Rep3 1083.4906609264299 1083.4895699358601 32.079 2 0.21388248538810284 0.00039635354736424893 0.0006937130299728674 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 16655 8496 EEQLQQIRAE True PC9_epitope_Rep2 1242.6204292260197 1242.6193299358602 38.045 2 0.2138781929323653 0.00039635354736424893 0.0006937815418458444 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 103821 10224 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep1 1225.56488887629 1225.56378993586 44.269 2 0.21386942389719776 0.00039635354736424893 0.0006939215254910218 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 65820 6737 LSDKNIEQY True H1975_Epitope_Rep2 1108.540053647 1108.53894993586 30.829 2 0.21386073170619374 0.00039635354736424893 0.0006940603104088453 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 115896 11990 TSETPDYLLKY True H1975_Epitope_Rep2 1328.6499980188 1328.64890993586 51.201 2 0.21386066249268781 0.00039635354736424893 0.0006940614156264038 ['ENSG00000105656|ENST00000262809|ELL'] 7186 11787 AQYEHDLEV True PC9_epitope_Rep3 1102.4931034545798 1102.49200993586 50.356 2 0.21385903576511878 0.00039635354736424893 0.0006940873921037091 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 138282 13070 YHAQMPDSL True PC9_epitope_Rep5 1060.46478053176 1060.4636899358602 55.281 2 0.21384670286275237 0.00039635354736424893 0.0006942843623811883 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 128386 17781 VPRPAVLDPAL True PC9_epitope_Rep1 1146.67609362734 1146.6749899358601 73.192 2 0.21384521738960807 0.00039635354736424893 0.0006943080908367447 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 1523 5982 AEENIEVARAA True H1975_Epitope_Rep3 1171.5833154413099 1171.5822099358602 28.021 2 0.2138276521357001 0.00039635354736424893 0.0006945887340825082 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 140287 7676 YRAQPSASL True PC9_epitope_Rep5 991.5086939490699 991.50758993586 34.469 2 0.21381685060931066 0.00039635354736424893 0.0006947613685388855 ['ENSG00000239306|ENST00000310137|RBM14'] 61891 10441 LLDDMNHCY True H1975_Epitope_Rep2 1122.4474162154602 1122.4463099358602 45.176 2 0.21380282141174323 0.00039635354736424893 0.000694985653238594 ['ENSG00000117318|ENST00000374561|ID3'] 103379 5311 SPPGQVTEAVK True NCI_RA007_Epitope_Rep2 1111.5873381925899 1111.58624993586 25.281 2 0.2137872287376845 0.00039635354736424893 0.0006952350184692009 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 49404 7398 KEVEQFTQV True H1975_Epitope_Rep2 1106.56078909158 1106.5596899358602 33.399 2 0.21378617430840968 0.00039635354736424893 0.0006952518846284102 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 118238 8701 TYLEKAIKI True NCI_RA007_Epitope_Rep3 1077.6433965167298 1077.6422899358602 41.308 2 0.21378331745517296 0.00039635354736424893 0.0006952975835841667 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 96143 7825 RYPDNLKHL True PC9_epitope_Rep3 1154.61964138038 1154.61799490379 35.088 3 0.2137732589061262 0.00039635354736424893 0.0006954585066967785 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 18363 9475 EITALAPSTM[Oxidation]K True PC9_epitope_Rep3 1176.6060254122801 1176.6049299358601 41.395 2 0.21377150355925517 0.00039635354736424893 0.0006954865936902097 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 47732 17738 IYDPNLAFLRF True NCI_RA007_Epitope_Rep5 1367.7237720957498 1367.72266993586 75.009 2 0.2137586159399034 0.00039635354736424893 0.0006956928410529195 ['ENSG00000197943|ENST00000564138|PLCG2'] 106784 20273 SVADYFKQI True PC9_epitope_Rep1 1069.54441075145 1069.5433099358602 82.807 2 0.21375434564493154 0.00039635354736424893 0.0006957611943680233 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 104255 11616 SQIDPSSIERA True PC9_epitope_Rep5 1201.5938801250102 1201.59278993586 49.676 2 0.21375041223464036 0.00039635354736424893 0.0006958241612341246 ['ENSG00000100393|ENST00000263253|EP300'] 88955 14572 QVIAGFNRL True PC9_epitope_Rep4 1016.57671393924 1016.57560993586 63.969 2 0.2137438345862724 0.00039635354736424893 0.000695929470399239 ['ENSG00000143256|ENST00000368010|PFDN2'] 15472 8681 EALQDVEDENQ True NCI_RA007_Epitope_Rep1 1288.5419041218 1288.5408099358601 37.769 2 0.21374139964335254 0.00039635354736424893 0.0006959684582663882 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 7765 6333 ASREEILAQAK True PC9_epitope_Rep3 1214.66190011518 1214.66026490379 29.389 3 0.2137211234024045 0.00039635354736424893 0.0006962932028987975 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 108794 18838 SYTRLFSNF True PC9_epitope_Rep4 1133.5505587610498 1133.54946993586 80.547 2 0.21371464075784719 0.00039635354736424893 0.0006963970611189012 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 74236 7231 NEIDNDGRIP True H1975_Epitope_Rep2 1141.53636524889 1141.53526993586 32.749 2 0.21371242417326453 0.00039635354736424893 0.0006964325765081561 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 125256 15217 VILEGELERA True PC9_epitope_Rep1 1127.6186383208699 1127.61754993586 63.353 2 0.21369544841040333 0.00039635354736424893 0.0006967046321750273 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 139265 22138 YLIPDIDLKL True PC9_epitope_Rep1 1201.69582601241 1201.69472993586 89.967 2 0.21367405194590675 0.00039635354736424893 0.000697047686453473 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 13498 8450 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep2 1091.49172393603 1091.4906299358602 37.511 2 0.21366902002306573 0.00039635354736424893 0.0006971283890050892 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 53336 7130 KQNDVFGEAEQ True NCI_RA007_Epitope_Rep1 1263.57314468043 1263.5720499358602 31.724 2 0.21366844195707652 0.00039635354736424893 0.0006971376606935795 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000465640.1_1_X:153670288-153671016:+|nuORF', 'ENST00000468483.5_1_X:153669954-153671016:+|nuORF', 'ENST00000491154.1_1_X:153670803-153671016:+|nuORF'] 107137 16432 SVIDHIHLI True PC9_epitope_Rep6 1045.59202965021 1045.59092993586 75.61 2 0.21365971606551165 0.00039635354736424893 0.0006972776316283848 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 7205 13426 AQYLINVRL True NCI_RA007_Epitope_Rep5 1088.63422881536 1088.63312993586 58.329 2 0.21364766749069602 0.00039635354736424893 0.0006974709476570726 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 41918 7714 IDAVNAETIR True NCI_RA007_Epitope_Rep1 1100.5825871653199 1100.5814899358602 33.998 2 0.21364628796606255 0.00039635354736424893 0.0006974930851764449 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF', 'ENST00000444457.5_1_7:102938385-102969496:+|nuORF', 'ENSG00000105819|ENST00000249269|PMPCB'] 134180 18631 VYLPNINKI True PC9_epitope_Rep5 1072.62808080576 1072.6269899358601 76.689 2 0.213643401439976 0.00039635354736424893 0.0006975394081431134 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 23691 20798 EYDNFFQHL True PC9_epitope_Rep5 1211.5247379360299 1211.52364993586 85.048 2 0.21363873684343354 0.00039635354736424893 0.0006976142721064956 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF'] 14348 4901 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 24.217 2 0.2136289650301939 0.00039635354736424893 0.0006977711299544151 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 62109 8436 LLEEDTPRY True H1975_Epitope_Rep2 1134.5557037111398 1134.55460993586 37.4 2 0.21362495573581072 0.00039635354736424893 0.0006978354976732585 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 96022 19949 RYLPKGFLNQF True PC9_epitope_Rep3 1381.7506555499297 1381.7490149037899 81.977 3 0.21362378852017422 0.00039635354736424893 0.0006978542380025299 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 9940 20519 AYMPHTFFI True PC9_epitope_Rep2 1125.53173789277 1125.53064993586 84.357 2 0.2136181763211812 0.00039635354736424893 0.0006979443521886631 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 36258 8606 GVDSSIFQNPK True NCI_RA007_Epitope_Rep4 1190.59315184902 1190.5920499358601 39.886 2 0.21359957409598462 0.00039635354736424893 0.0006982431286514831 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 77063 14968 NRLDAELQL True PC9_epitope_Rep6 1070.57202248162 1070.57092993586 69.584 2 0.21359750742364847 0.00039635354736424893 0.000698276330075564 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'ENST00000467553.2_1_6:31112829-31113051:-|nuORF'] 142282 12551 YYAEVETRI True PC9_epitope_Rep4 1142.5607890915799 1142.5596899358602 56.099 2 0.21359054551847428 0.00039635354736424893 0.0006983881858596874 ['ENSG00000112685|ENST00000230449|EXOC2'] 90849 8825 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 38.912 3 0.21357977716057908 0.00039635354736424893 0.0006985612347027064 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 140352 13055 YRDPTTVTTL True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 55.084 2 0.21356436844637866 0.00039635354736424893 0.0006988089294721689 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 93601 7920 RQPDSGISSI True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 37.894 2 0.21354586253440583 0.00039635354736424893 0.00069910652810399 ['ENSG00000163902|ENST00000296255|RPN1'] 38338 6670 HEIDRYTAIA True H1975_Epitope_Rep2 1187.59348620219 1187.5923899358602 30.565 2 0.2135433879354144 0.00039635354736424893 0.0006991463324446255 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32916643-32917850:-|nuORF'] 118535 7908 TYQEVAQKF True NCI_RA007_Epitope_Rep4 1112.5502244078798 1112.54912993586 37.156 2 0.2135381236276049 0.00039635354736424893 0.0006992310172843896 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 49879 8332 KIFSGVFVK True NCI_RA007_Epitope_Rep3 1023.6117024656298 1023.61060993586 39.889 2 0.2135339827106635 0.00039635354736424893 0.0006992976378107236 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 70319 7565 LVSESSDVLPK True NCI_RA007_Epitope_Rep5 1172.6288686514001 1172.6277699358602 35.784 2 0.2135175851369399 0.00039635354736424893 0.0006995615102833434 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 142699 8317 YYQDTPKQI True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 37.356 2 0.21351378972911678 0.00039635354736424893 0.000699622600851001 ['ENSG00000048162|ENST00000614830|NOP16'] 97747 10904 SEIPKLPAV True NCI_RA007_Epitope_Rep3 952.5593325395998 952.55822993586 49.965 2 0.21351316236967893 0.00039635354736424893 0.0006996326992916563 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 46300 4829 ISQEQM[Oxidation]QEFR True H1975_Epitope_Rep3 1310.59250060646 1310.5914099358602 23.7 2 0.21351104900187018 0.00039635354736424893 0.000699666718696228 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 18368 7891 EITALAPSTM[Oxidation]K True PC9_epitope_Rep6 1176.6060254122801 1176.6049299358601 39.778 2 0.21351098383707598 0.00039635354736424893 0.0006996677676964219 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 116263 12026 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 51.268 2 0.2135069202134306 0.00039635354736424893 0.0006997331856140143 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 94882 8110 RTAVPSFLTK True NCI_RA007_Epitope_Rep4 1118.64479349906 1118.64368993586 37.982 2 0.21350155259074058 0.00039635354736424893 0.0006998196052618799 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 111326 13936 THNIIVNQL True PC9_epitope_Rep5 1050.5821932425 1050.58108993586 58.626 2 0.21349460942380424 0.00039635354736424893 0.0006999314073279781 ['ENSG00000198356|ENST00000357332|GET3'] 44319 17586 ILDIPNQLYY True H1975_Epitope_Rep2 1250.6546894764201 1250.65358993586 72.957 2 0.21349192213674398 0.00039635354736424893 0.0006999746840698195 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF', 'ENST00000482545.5_1_1:113239451-113241292:+|nuORF', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 26315 18834 FHNELLTQL True PC9_epitope_Rep2 1113.5818588893299 1113.5807699358602 77.813 2 0.21348522242064774 0.00039635354736424893 0.0007000825896612942 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 14358 5380 DSYVGDEAQSK True PC9_epitope_Rep5 1197.51496109797 1197.5138699358602 25.708 2 0.21347900581841794 0.00039635354736424893 0.0007001827291511932 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 95947 8242 RYLENGKETL True PC9_epitope_Rep1 1221.6353510141698 1221.63424993586 36.537 2 0.2134705539984564 0.00039635354736424893 0.0007003188974652218 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 96128 14341 RYNPNLNTW True PC9_epitope_Rep5 1176.5676058075198 1176.56650993586 60.164 2 0.2134678908473069 0.00039635354736424893 0.0007003618093266604 ['ENSG00000178502|ENST00000319121|KLHL11'] 109703 12577 TEDGDSFLHLA True H1975_Epitope_Rep1 1203.54078192299 1203.53968993586 53.424 2 0.21346438776948937 0.00039635354736424893 0.0007004182591038478 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 125975 13633 VLDNPSPFY True H1975_Epitope_Rep2 1050.5022115863 1050.5016749679298 57.578 1 0.21346434197832564 0.00039635354736424893 0.0007004189970283265 ['ENST00000511766.2_1_6:119215493-119222091:+|nuORF', 'ENSG00000111875|ENST00000229595|ASF1A'] 25402 11588 FEDENFILK True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 49.56 2 0.2134634755187454 0.00039635354736424893 0.0007004329601691197 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 74965 5688 NHNKITQSL True PC9_epitope_Rep5 1053.55670677065 1053.55560993586 26.875 2 0.21345845389277657 0.00039635354736424893 0.0007005138900098927 ['ENSG00000273749|ENST00000617928|CYFIP1'] 77618 6009 NTEEEGLKY True H1975_Epitope_Rep3 1081.4927691014097 1081.49166993586 28.126 2 0.21345470888085424 0.00039635354736424893 0.0007005742517113555 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 5263 18549 ALPSKLPTF True PC9_epitope_Rep1 972.56441792004 972.56332993586 76.138 2 0.2134545846657649 0.00039635354736424893 0.0007005762538862872 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 22236 9205 ESYSVYVYK True NCI_RA007_Epitope_Rep2 1136.5389910178399 1136.53847496793 40.415 1 0.21345072902642573 0.00039635354736424893 0.0007006384042988663 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 61374 5376 LITEDVQGK True NCI_RA007_Epitope_Rep5 1001.5393253710098 1001.53822993586 27.368 2 0.21344760969390364 0.00039635354736424893 0.0007006886899698625 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 31392 7769 GDVENIEVVQK True NCI_RA007_Epitope_Rep2 1228.6299312805597 1228.62882993586 34.846 2 0.21343479446656774 0.00039635354736424893 0.0007008953177772718 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 28743 15566 FSSPHLVQV True PC9_epitope_Rep1 1012.5341804209198 1012.53308993586 64.698 2 0.2134334297567727 0.00039635354736424893 0.0007009173254358021 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 54673 19410 KYLSVQGQLF True PC9_epitope_Rep1 1181.64445914589 1181.6433699358602 79.47 2 0.213432076643945 0.00039635354736424893 0.0007009391467631874 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 1840 5469 AEIDEEPVSKA True H1975_Epitope_Rep2 1186.5717476981001 1186.57064993586 26.064 2 0.21342353895503163 0.00039635354736424893 0.0007010768477524416 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000550343.1_1_12:57108115-57108487:-|nuORF', 'ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 17034 10058 EGEFVAQFK True NCI_RA007_Epitope_Rep1 1053.5131106231697 1053.51200993586 43.131 2 0.213415807735655 0.00039635354736424893 0.0007012015649320912 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 41457 15888 HYKPTPLYF True PC9_epitope_Rep3 1164.59678067748 1164.59568993586 66.262 2 0.21340894601825353 0.00039635354736424893 0.0007013122742720938 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 70182 10860 LVQAFQFTDK True H1975_Epitope_Rep3 1195.62372370131 1195.62262993586 46.855 2 0.2133966392071533 0.00039635354736424893 0.0007015108805878916 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 138821 20107 YIYDKDMEII True PC9_epitope_Rep3 1301.6213407428097 1301.62024993586 82.593 2 0.21338929095200646 0.00039635354736424893 0.0007016294930365803 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 96896 8059 SATTSPFFK True NCI_RA007_Epitope_Rep3 984.4916469025999 984.49054993586 38.787 2 0.21337809703257923 0.00039635354736424893 0.0007018102192575878 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 72668 2753 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 14.618 2 0.2133664057625393 0.00039635354736424893 0.0007019990250870412 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 48011 12763 IYLEKLKTI True PC9_epitope_Rep6 1119.69034670915 1119.68924993586 60.586 2 0.21336162971648628 0.00039635354736424893 0.0007020761695495787 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 26868 7731 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.56622993586 34.689 2 0.21335296443579987 0.00039635354736424893 0.0007022161560848114 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 96232 12848 RYQDAIRVF True PC9_epitope_Rep4 1166.6196413803798 1166.61854993586 57.286 2 0.21335215963333773 0.00039635354736424893 0.0007022291589899991 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 53234 17817 KQFEPNDFYL True PC9_epitope_Rep6 1299.6135529404298 1299.61244993586 81.164 2 0.21334977540070837 0.00039635354736424893 0.0007022676816007513 ['ENSG00000101126|ENST00000621696|ADNP'] 107149 6787 SVIDTSTIVRK True NCI_RA007_Epitope_Rep5 1217.69795127073 1217.69629490379 32.793 3 0.21334922222091277 0.00039635354736424893 0.0007022766197606367 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 106150 13680 STDNFTRILEY True H1975_Epitope_Rep1 1357.65139500113 1357.6502899358602 57.756 2 0.2133435251286373 0.00039635354736424893 0.0007023686787905837 ['ITGA5|p.E895Kfs*15|1|0.2|ENSG00000161638|chr12:54399908-54399908|C/-|frameshift_variant', 'ENSG00000161638|ENST00000293379|ITGA5'] 109473 15635 TDLLLEPYNK True PC9_epitope_Rep4 1204.6339540318397 1204.6328499358601 68.065 2 0.21332597386221938 0.00039635354736424893 0.0007026523649441403 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 78439 20159 NYLSIFRKF True PC9_epitope_Rep5 1186.6498788795 1186.6487899358601 82.59 2 0.21331346125416822 0.00039635354736424893 0.000702854680008185 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 90261 5742 REEFLERAA True H1975_Epitope_Rep2 1119.5672714543498 1119.5661699358602 27.086 2 0.2132942831511505 0.00039635354736424893 0.0007031648822167011 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1'] 14997 14832 DYKESFNTI True PC9_epitope_Rep2 1115.5135045459901 1115.5124099358602 62.314 2 0.2132892107906162 0.00039635354736424893 0.0007032469496612607 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 39737 11385 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7072149037901 51.565 3 0.21326675394905587 0.00039635354736424893 0.0007036104020028699 ['CON__P02769'] 85213 9280 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 40.653 2 0.21326174758605568 0.00039635354736424893 0.0007036914530804414 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 85821 13977 QHEEFVTSL True PC9_epitope_Rep2 1088.51383889916 1088.51274993586 59.035 2 0.2132612890940142 0.00039635354736424893 0.000703698876357195 ['ENSG00000085872|ENST00000546361|CHERP'] 8647 11216 AVAEEVNAILK True NCI_RA007_Epitope_Rep5 1155.6499384491499 1155.6488499358602 49.779 2 0.21325628395797275 0.00039635354736424893 0.0007037799177926189 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 96042 20731 RYLPTGSFPFL True PC9_epitope_Rep4 1296.6866583110398 1296.68556993586 87.906 2 0.21324748770719115 0.00039635354736424893 0.0007039223663397645 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 127491 6567 VNLPINGNGKQ True NCI_RA007_Epitope_Rep3 1152.62512068364 1152.62402993586 32.883 2 0.21322528604992627 0.00039635354736424893 0.0007042820338459396 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 48410 21294 IYVHDLLTF True PC9_epitope_Rep5 1119.59644632431 1119.5953499358602 86.959 2 0.2132119755018592 0.00039635354736424893 0.0007044977535212388 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 31715 8858 GEGNFGQVIRA True NCI_RA007_Epitope_Rep4 1146.57817049122 1146.5770699358602 40.894 2 0.21321067621954087 0.00039635354736424893 0.0007045188141135714 ['ENSG00000066056|ENST00000372476|TIE1', 'ENST00000473014.1_1_1:43779426-43783109:+|nuORF'] 23066 17681 EVIEKFDYV True PC9_epitope_Rep5 1140.5702911461199 1140.56918993586 73.024 2 0.2131978611191508 0.00039635354736424893 0.0007047265731007047 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 24336 7136 EYVRNQQTI True PC9_epitope_Rep5 1149.57783613805 1149.5767299358602 32.418 2 0.21319339540535695 0.00039635354736424893 0.0007047989858964734 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 140713 6397 YSAPQHDYY True H1975_Epitope_Rep1 1142.46688870674 1142.4657899358601 29.665 2 0.21319122240864108 0.00039635354736424893 0.0007048342243448711 ['ENSG00000064195|ENST00000434704|DLX3'] 74911 17209 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69592490379 71.35 3 0.2131895505712536 0.00039635354736424893 0.0007048613369353219 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 113407 6510 TLSDYNIQK True H1975_Epitope_Rep3 1080.54513902744 1080.5440499358601 30.01 2 0.21318720102221447 0.00039635354736424893 0.0007048994419078484 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000597285.1_1_19:7730614-7730836:+|nuORF', 'ENST00000392399.3_1_2:137087013-137087097:-|nuORF', 'UBC|p.R510L|1|0.8|ENSG00000150991|chr12:124912243-124912243|C/A|missense_variant', 'ENSG00000221983|ENST00000442744|UBA52'] 118034 14813 TYESIFSHF True NCI_RA007_Epitope_Rep5 1129.50802524273 1129.5069299358602 63.65 2 0.21318580164780399 0.00039635354736424893 0.0007049221379358851 ['ENST00000530761.5_1_11:117857521-117870353:+|nuORF', 'ENSG00000110324|ENST00000227752|IL10RA'] 97109 4386 [Acetylation]-SDKPDM[Oxidation]AEIEK True H1975_Epitope_Rep3 1319.5914978632497 1319.59038993586 21.991 2 0.21317891663347222 0.00039635354736424893 0.0007050338145679053 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 47746 21216 IYEIIDNSQGF True PC9_epitope_Rep1 1297.6190322436898 1297.61792993586 86.432 2 0.21317823660955093 0.00039635354736424893 0.0007050448456869314 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 8646 11198 AVAEEVNAILK True NCI_RA007_Epitope_Rep4 1155.6499384491499 1155.6488499358602 49.96 2 0.2131657201740866 0.00039635354736424893 0.0007052479140167876 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 70780 13477 LYANMFERL True NCI_RA007_Epitope_Rep3 1155.57466533391 1155.5735699358602 60.301 2 0.2131527056998254 0.00039635354736424893 0.0007054591248265497 ['ENSG00000004478|ENST00000001008|FKBP4'] 76235 9339 NPDIFSPGVR True H1975_Epitope_Rep1 1100.5614577979197 1100.56036993586 40.83 2 0.21314991460567892 0.00039635354736424893 0.000705504429523178 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 88059 17119 QRQQLLVSL True PC9_epitope_Rep5 1083.64004247179 1083.6389499358602 70.869 2 0.21314325053214073 0.00039635354736424893 0.0007056126117504108 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 85578 14162 QGFQLTHSL True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 62.379 2 0.21313407895818523 0.00039635354736424893 0.0007057615270743418 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'TUBB2A|p.G140V|1|0.41|ENSG00000137267|chr6:3154782-3154782|C/A|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 24173 8931 EYQKVGQSF True PC9_epitope_Rep5 1084.5189242795998 1084.5178299358602 39.297 2 0.21312330039158306 0.00039635354736424893 0.0007059365748245664 ['nc|ENSG00000178996|Q96RF0-3|SNX18', 'ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 107756 6800 SVSQPIMVQR True NCI_RA007_Epitope_Rep4 1143.60702809135 1143.60592993586 32.781 2 0.21311635060799694 0.00039635354736424893 0.0007060494648763436 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'PUM1-NKAIN1|3|fusion'] 49548 15148 KFLDGIYVSEK True PC9_epitope_Rep5 1297.69180326113 1297.69015490379 63.274 3 0.21311569499141353 0.00039635354736424893 0.0007060601154363867 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 24091 19169 EYPDRIMNTF True PC9_epitope_Rep3 1284.5808729131597 1284.5797699358602 78.952 2 0.21311307620216616 0.00039635354736424893 0.0007061026595498083 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 54689 20129 KYLTEGLLQF True PC9_epitope_Rep4 1210.65977485686 1210.6586699358602 85.561 2 0.213111847380083 0.00039635354736424893 0.0007061226235342777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 90552 7351 REM[Oxidation]EENFAV True H1975_Epitope_Rep1 1139.49172393603 1139.4906299358602 33.286 2 0.21310812708106125 0.00039635354736424893 0.0007061830686026038 ['ENSG00000026025|ENST00000544301|VIM'] 44469 17059 ILLAEVDKV True PC9_epitope_Rep2 998.6011973515799 998.60010993586 70.869 2 0.2131039675966516 0.00039635354736424893 0.000706250655424489 ['ENSG00000013523|ENST00000251089|ANGEL1'] 40853 6248 HSEAFEALQQK True NCI_RA007_Epitope_Rep1 1286.6255146064598 1286.62387490379 28.337 3 0.21309615591378225 0.00039635354736424893 0.0007063776037970455 ['ENSG00000136026|ENST00000378026|CKAP4'] 106222 6751 STEERTFQY True H1975_Epitope_Rep2 1159.51456717515 1159.51346993586 30.883 2 0.2130937855831445 0.00039635354736424893 0.0007064161287842935 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT', 'nc|ENSG00000005469|Q9UKG9-2|CROT'] 142848 19957 YYTDIMHTL True PC9_epitope_Rep5 1155.5270464351497 1155.5259499358601 81.817 2 0.21309213549156295 0.00039635354736424893 0.0007064429489696932 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 18907 8786 ELEDSTLRY True H1975_Epitope_Rep2 1124.5349682665599 1124.5338699358601 38.759 2 0.21308522331587154 0.00039635354736424893 0.0007065553088884646 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 120203 8972 VEAQLQELQVK True H1975_Epitope_Rep1 1283.7085159544297 1283.7074099358601 39.416 2 0.21307872786613757 0.00039635354736424893 0.0007066609111171459 ['ENSG00000100345|ENST00000216181|MYH9'] 77511 10620 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4603699358602 45.806 2 0.21307603386349577 0.00039635354736424893 0.0007067047145290127 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 96175 8022 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.55560993586 37.622 2 0.21307333652395816 0.00039635354736424893 0.0007067485749267732 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 74505 14109 NFGIGQDIQPK True PC9_epitope_Rep5 1215.62478633047 1215.62368993586 59.281 2 0.21306036628800065 0.00039635354736424893 0.0007069595170748267 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 54943 19698 KYPSPFFVF True PC9_epitope_Rep6 1130.5800679841798 1130.5789699358602 88.425 2 0.21305555011740154 0.00039635354736424893 0.0007070378612129936 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 54971 9327 KYQEVTNNL True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 40.816 2 0.21304882149539048 0.00039635354736424893 0.0007071473295823752 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 49471 15725 KEYWFVLTA True NCI_RA007_Epitope_Rep4 1155.59644632431 1155.5953499358602 68.29 2 0.2130483132738741 0.00039635354736424893 0.0007071555985604613 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 119837 12243 VDDGLISLQVK True NCI_RA007_Epitope_Rep1 1185.6605031328502 1185.6594099358601 51.591 2 0.2130428423586666 0.00039635354736424893 0.0007072446187981576 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 17790 17678 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 72.793 2 0.2130394167202702 0.00039635354736424893 0.000707300364948271 ['ENSG00000143256|ENST00000368010|PFDN2'] 120214 9750 VEAQVYILSK True H1975_Epitope_Rep3 1148.6441247927198 1148.64302993586 42.527 2 0.21302083387214435 0.00039635354736424893 0.0007076028444624509 ['ENSG00000178952|ENST00000313511|TUFM', 'ENST00000569217.1_1_16:28854298-28855510:-|nuORF'] 8036 5779 ATDMPVKNQY True H1975_Epitope_Rep3 1165.54375912845 1165.5426699358602 27.254 2 0.21298689308146718 0.00039635354736424893 0.0007081556456186998 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 108526 15186 SYMLVNENRF True PC9_epitope_Rep6 1271.5968573304701 1271.59576993586 70.493 2 0.2129846367972295 0.00039635354736424893 0.0007081924095744377 ['ENSG00000182195|ENST00000370526|LDOC1'] 32829 6893 GHLKVVQSL True NCI_RA007_Epitope_Rep4 979.5814649665099 979.58036993586 33.132 2 0.21297723540796376 0.00039635354736424893 0.0007083130214534975 ['ENSG00000145780|ENST00000274457|FEM1C'] 137500 6394 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 29.654 2 0.21297179846706468 0.00039635354736424893 0.0007084016341200423 ['ENSG00000127184|ENST00000247655|COX7C'] 63256 11557 LLSNDEVTIK True PC9_epitope_Rep2 1130.6183039677 1130.61720993586 49.779 2 0.2129686134999648 0.00039635354736424893 0.0007084535487023071 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 7168 6981 AQYEDIAQKS True PC9_epitope_Rep3 1151.5458673034298 1151.5447699358601 31.864 2 0.2129641420285331 0.00039635354736424893 0.0007085264395924731 ['ENSG00000167768|ENST00000252244|KRT1'] 94887 10365 RTDDYLDQPCY True H1975_Epitope_Rep2 1387.5714304282699 1387.5703299358602 44.878 2 0.21295680355923255 0.00039635354736424893 0.0007086460826427375 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 74174 5396 NEEEIRANVA True H1975_Epitope_Rep2 1143.55201531303 1143.55090993586 25.789 2 0.21295164785913137 0.00039635354736424893 0.0007087301509441834 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 88925 20552 QVFPGLLERV True PC9_epitope_Rep5 1156.6604435631998 1156.65934993586 84.099 2 0.2129343439663016 0.00039635354736424893 0.0007090123795502148 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 26147 14582 FGYQFTQQGPR True PC9_epitope_Rep1 1327.6309343400699 1327.62982993586 60.913 2 0.21293315710814614 0.00039635354736424893 0.0007090317414835423 ['ENSG00000138594|ENST00000308580|TMOD3'] 4784 19579 ALDVANKIGII True PC9_epitope_Rep2 1125.6757592741699 1125.67466993586 80.692 2 0.2129330842719541 0.00039635354736424893 0.000709032929721575 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 53288 14623 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6750499358602 61.516 2 0.2129306811014707 0.00039635354736424893 0.00070907213578242 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 1848 4459 AEIDNIKNQRA True NCI_RA007_Epitope_Rep4 1270.6629627443401 1270.66132490379 23.525 3 0.21291703326270692 0.00039635354736424893 0.0007092948320683469 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 137804 11226 YEQLSSEALEA True H1975_Epitope_Rep2 1238.56666231766 1238.5655699358601 48.222 2 0.2129094187510682 0.00039635354736424893 0.0007094191110623016 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 97640 10423 SEFTKIITP True NCI_RA007_Epitope_Rep3 1034.5648118428599 1034.56370993586 48.068 2 0.21290249797502026 0.00039635354736424893 0.0007095320863179798 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 133872 14630 VYGSFASKL True PC9_epitope_Rep1 970.5123823471799 970.51128993586 61.098 2 0.2128946503698384 0.00039635354736424893 0.0007096602130395076 ['ENSG00000155096|ENST00000337198|AZIN1'] 44291 17713 ILDEAIYKV True PC9_epitope_Rep1 1062.5961119711399 1062.5950099358602 72.928 2 0.21289351346385058 0.00039635354736424893 0.0007096787770651423 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 95270 11085 RVPELLHRL True PC9_epitope_Rep2 1131.68766137055 1131.68602490379 47.962 3 0.21289046452880123 0.00039635354736424893 0.0007097285641572575 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 134702 19720 VYTLLTTHL True PC9_epitope_Rep5 1059.5964463243101 1059.5953499358602 80.898 2 0.21288238279401936 0.00039635354736424893 0.000709860550495273 ['nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 14006 20195 DRFEFPEQL True PC9_epitope_Rep2 1179.5560380643099 1179.5549499358601 83.095 2 0.21285778211283202 0.00039635354736424893 0.0007102624665502496 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 90909 4761 REYNWNVKNKA True NCI_RA007_Epitope_Rep2 1420.7211463267997 1420.71949490379 23.148 3 0.21285517598075132 0.00039635354736424893 0.0007103050578625975 ['nc|ENSG00000006712|Q8N7H5-3|PAF1', 'nc|ENSG00000006712|Q8N7H5-2|PAF1', 'ENSG00000006712|ENST00000221265|PAF1'] 24263 18745 EYTDVLQKI True PC9_epitope_Rep1 1107.58119018299 1107.58008993586 76.89 2 0.21283863353464624 0.00039635354736424893 0.000710575466350409 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 66099 8000 LSEKPTVTTVY True H1975_Epitope_Rep3 1236.6601687796801 1236.65906993586 35.742 2 0.21283563965461844 0.00039635354736424893 0.0007106244163749879 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 61974 10088 LLDPAQRNLY True H1975_Epitope_Rep2 1201.64552177505 1201.6444299358602 43.796 2 0.21282566101316083 0.00039635354736424893 0.000710787591881526 ['ENSG00000198028|ENST00000301480|ZNF560', 'ENSG00000178150|ENST00000595607|ZNF114'] 133756 16771 VYEGPELNHAF True PC9_epitope_Rep1 1274.59315184902 1274.5920499358601 69.333 2 0.21282373996215723 0.00039635354736424893 0.0007108190101391962 ['ENSG00000123384|ENST00000243077|LRP1'] 73590 9336 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep5 1074.57433136118 1074.5732299358601 40.864 2 0.21280966453996786 0.00039635354736424893 0.0007110492522837569 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 90920 12049 REYQDLLNV True NCI_RA007_Epitope_Rep1 1148.5825871653199 1148.5814899358602 50.856 2 0.2127835483328177 0.00039635354736424893 0.0007114766527343493 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 54789 14397 KYNLINEYF True NCI_RA007_Epitope_Rep5 1202.5971746003 1202.5960699358602 62.061 2 0.2127800269309776 0.00039635354736424893 0.0007115343013682817 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 11174 11166 DDPHAC[Carbamidomethyl]YSTVF True H1975_Epitope_Rep3 1310.5237522392902 1310.52264993586 48.047 2 0.21277631726097262 0.00039635354736424893 0.0007115950371968483 ['CON__P02769'] 93366 10508 RPYQPLPEA True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 45.406 2 0.21275539580287386 0.00039635354736424893 0.0007119376669770112 ['ENSG00000165476|ENST00000373758|REEP3'] 42272 18855 IDTIEIITDR True PC9_epitope_Rep5 1187.63976768827 1187.6386699358602 77.543 2 0.21275443422723503 0.00039635354736424893 0.0007119534186360801 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 49093 6378 KEIENTYANVA True NCI_RA007_Epitope_Rep3 1250.61428121642 1250.6131899358602 32.09 2 0.21274671465419598 0.00039635354736424893 0.000712079886344681 ['ENSG00000155962|ENST00000369449|CLIC2'] 76383 13150 NQAKYIPEL True PC9_epitope_Rep6 1074.57095985246 1074.5698699358602 62.223 2 0.21273376004844333 0.00039635354736424893 0.0007122921688516981 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 73254 4321 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep3 1081.43862573401 1081.43752993586 21.737 2 0.21273198110142785 0.00039635354736424893 0.000712321324780182 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 41204 16316 HVLDDFVKV True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 68.005 2 0.2127250686337101 0.00039635354736424893 0.0007124346275556936 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 54494 17323 KYIDFDHVF True PC9_epitope_Rep6 1182.57095985246 1182.5693249037902 79.246 3 0.21272190171530858 0.00039635354736424893 0.0007124865427916746 ['ENSG00000007545|ENST00000397412|CRAMP1'] 102708 7756 SM[Oxidation]DEKVELY True H1975_Epitope_Rep2 1128.5008916374 1128.49978993586 34.788 2 0.2127211379863521 0.00039635354736424893 0.0007124990631546527 ['ENSG00000131143|ENST00000253452|COX4I1'] 10005 20624 AYQHLFYLL True PC9_epitope_Rep4 1166.6124307416198 1166.61132993586 87.486 2 0.21271957718726953 0.00039635354736424893 0.0007125246511531402 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 39115 14912 HHYEGAVVIL True PC9_epitope_Rep1 1136.5978433066398 1136.5961849037901 62.181 3 0.21271819863292687 0.00039635354736424893 0.0007125472521679855 ['ENSG00000163655|ENST00000496455|GMPS'] 118090 20079 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.54357496793 82.283 1 0.21271671377425425 0.00039635354736424893 0.0007125715968173465 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 90850 8936 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 39.332 3 0.21271266421766552 0.00039635354736424893 0.0007126379946065961 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 14775 8555 DVNQQEFVR True PC9_epitope_Rep4 1133.5465360097699 1133.54542993586 40.385 2 0.2127001816103966 0.00039635354736424893 0.0007128427023775395 ['ENSG00000105372|ENST00000598742|RPS19'] 55010 9968 KYQKGFSLW True NCI_RA007_Epitope_Rep3 1155.6076797143498 1155.60658993586 46.293 2 0.21266980695091733 0.00039635354736424893 0.0007133410762732178 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 114976 18338 TQYPFDFRGA True PC9_epitope_Rep2 1200.5563724174797 1200.55526993586 75.868 2 0.2126621811139157 0.00039635354736424893 0.0007134662525041179 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 72930 13695 MPWGDPNYRSA True PC9_epitope_Rep4 1292.5608061749201 1292.5597099358602 60.567 2 0.21265904007372385 0.00039635354736424893 0.0007135178183111094 ['ENSG00000124226|ENST00000244061|RNF114'] 66183 8899 LSERADWQY True H1975_Epitope_Rep2 1166.5356369729 1166.53452993586 39.197 2 0.21265764924901928 0.00039635354736424893 0.0007135406523869483 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 107834 12277 SVVDHFNRI True PC9_epitope_Rep3 1085.56179215109 1085.5606899358602 52.249 2 0.21263268578464475 0.00039635354736424893 0.0007139506185524378 ['ENSG00000103035|ENST00000219313|PSMD7', 'ENST00000566015.1_1_16:74330767-74334139:+|nuORF', 'ENST00000422197.2_1_1:51837944-51838202:+|nuORF'] 26930 15742 FLDPITGTFRY True H1975_Epitope_Rep2 1328.67648755016 1328.67538993586 65.723 2 0.2126275605921074 0.00039635354736424893 0.0007140348170168571 ['ENSG00000138592|ENST00000307179|USP8', 'nc|ENSG00000138592|P40818-2|USP8'] 115754 6524 TSDDVKEQIY True H1975_Epitope_Rep1 1196.55609763396 1196.5550099358602 30.154 2 0.21262534770280425 0.00039635354736424893 0.0007140711742194581 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 140347 13245 YRDPNTIETL True PC9_epitope_Rep5 1220.60371653272 1220.60260993586 55.957 2 0.21262372942319419 0.00039635354736424893 0.0007140977633133907 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 40729 6612 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.61258490379 30.235 3 0.2126223528907864 0.00039635354736424893 0.0007141203811691063 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 124664 20333 VGYDKDFLTI True PC9_epitope_Rep5 1169.5968402471299 1169.59574993586 83.246 2 0.21261998301479668 0.00039635354736424893 0.0007141593223744612 ['ENSG00000123066|ENST00000281928|MED13L'] 125421 6303 VITEEEKNFK True PC9_epitope_Rep5 1235.63976768827 1235.63812490379 29.219 3 0.2125935322633456 0.00039635354736424893 0.0007145940990783172 ['ENSG00000167526|ENST00000311528|RPL13', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000570149.1_1_16:89628679-89629447:+|nuORF'] 38350 9508 HEIESLYTKL True NCI_RA007_Epitope_Rep4 1231.6448530687098 1231.6437499358601 43.424 2 0.21257678801546015 0.00039635354736424893 0.0007148694651471837 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 12758 12746 DLEKEAPWEY True H1975_Epitope_Rep2 1278.57683307854 1278.5757299358602 54.13 2 0.21257666015998583 0.00039635354736424893 0.0007148715681927537 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ENSG00000125257|ENST00000645237|ABCC4'] 86119 13053 QHVTTQLVL True PC9_epitope_Rep2 1037.58694426977 1037.58584993586 55.488 2 0.2125763195499995 0.00039635354736424893 0.0007148771707858385 ['ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74469085-74473795:-|nuORF', 'ENST00000589582.5_1_17:74470614-74477615:-|nuORF'] 3822 10807 AGVLAHLEEER True PC9_epitope_Rep2 1222.6305999868998 1222.6289549037901 46.885 3 0.21256372616056388 0.00039635354736424893 0.0007150843466582038 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 90621 11625 RENEITGALLP True NCI_RA007_Epitope_Rep5 1211.6510010783097 1211.64990993586 51.367 2 0.21255164471170038 0.00039635354736424893 0.0007152831571298287 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'SAMHD1|p.E417Kfs*6|1|0.22|ENSG00000101347|chr20:36911239-36911239|C/-|frameshift_variant', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1', 'SAMHD1|p.R339Vfs*5|1|0.31|ENSG00000101347|chr20:36916769-36916769|G/-|frameshift_variant'] 15075 14703 DYSSILQKF True NCI_RA007_Epitope_Rep3 1099.55497543515 1099.5538699358601 65.231 2 0.21254154177696716 0.00039635354736424893 0.000715449452053129 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 27553 15390 FNDTFVHV True PC9_epitope_Rep4 977.4606811274899 977.45958993586 67.13 2 0.21254043721961455 0.00039635354736424893 0.0007154676354867749 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 64758 7324 LQAEIDNIK True H1975_Epitope_Rep3 1042.56587447202 1042.56476993586 33.146 2 0.21253780875333292 0.00039635354736424893 0.0007155109076641637 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 21827 11359 ESAFRKLDELY True H1975_Epitope_Rep2 1369.6877805098497 1369.6866899358602 48.741 2 0.21252608043093063 0.00039635354736424893 0.0007157040218623698 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF'] 130140 6291 VSDSKQFTY True H1975_Epitope_Rep2 1073.50293986229 1073.50184993586 29.138 2 0.2125080981503326 0.00039635354736424893 0.000716000212971942 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 95223 21067 RVLELIPQI True PC9_epitope_Rep1 1079.6702799709099 1079.66918993586 85.867 2 0.2124910245599741 0.00039635354736424893 0.0007162815506108571 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1', 'ENST00000404284.6_1_22:35717823-35727385:+|nuORF'] 96287 9045 RYQTQPVTL True PC9_epitope_Rep6 1104.5927579261997 1104.5916699358602 44.845 2 0.21247600498079516 0.00039635354736424893 0.0007165291340699428 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 85579 15642 QGFQLTHSL True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 65.179 2 0.21246069108170829 0.00039635354736424893 0.0007167816575133641 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'TUBB2A|p.G140V|1|0.41|ENSG00000137267|chr6:3154782-3154782|C/A|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 70977 18148 LYGRNFNYL True PC9_epitope_Rep5 1158.5821932425 1158.58108993586 74.815 2 0.21245881142433753 0.00039635354736424893 0.0007168126588773446 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 22093 3977 ESPKEPEQLR True NCI_RA007_Epitope_Rep2 1211.61461556959 1211.6129849037902 20.105 3 0.21245560865353574 0.00039635354736424893 0.0007168654855733058 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 18350 7185 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.6049299358601 31.938 2 0.21244838024015647 0.00039635354736424893 0.0007169847258185494 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 37870 21199 GYPLWKVTF True PC9_epitope_Rep3 1109.59096702105 1109.5898699358602 86.832 2 0.21243846760365404 0.00039635354736424893 0.0007171482774904674 ['ENSG00000198805|ENST00000361505|PNP'] 106245 11360 STEQFQEYY True H1975_Epitope_Rep2 1193.48768372097 1193.4865899358601 48.745 2 0.21243813520669438 0.00039635354736424893 0.0007171537624598414 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 99528 14008 SIDSLQLGY True H1975_Epitope_Rep2 994.49712620586 994.49602993586 59.03 2 0.21242669608428089 0.00039635354736424893 0.0007173425480679213 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 58626 6271 LEQYPTRPHIA True H1975_Epitope_Rep1 1323.69353459663 1323.69187490379 29.189 3 0.21240539601447683 0.00039635354736424893 0.0007176942067350678 ['ENSG00000138382|ENST00000260953|METTL5', 'ENST00000471560.1_1_2:170680960-170681107:-|nuORF'] 49142 8147 KELDYGSMTEA True H1975_Epitope_Rep3 1242.5438186980998 1242.54272993586 36.314 2 0.21238619682818244 0.00039635354736424893 0.0007180113285674786 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 40297 15153 HQNQLLSSL True PC9_epitope_Rep1 1038.5458077337798 1038.54470993586 63.107 2 0.2123834281979388 0.00039635354736424893 0.0007180570709097044 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 86051 8848 QHQSGIVQL True PC9_epitope_Rep6 1008.5352430500798 1008.53414993586 43.966 2 0.2123783352323879 0.00039635354736424893 0.0007181412227443695 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 24114 17124 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 71.115 2 0.21237642183792765 0.00039635354736424893 0.0007181728406053037 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 118094 17889 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.54357496793 81.436 1 0.21237216369561596 0.00039635354736424893 0.0007182432092331461 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 115309 15778 TRHPFLTAL True PC9_epitope_Rep1 1054.59236400338 1054.59126993586 65.509 2 0.21235876344121005 0.00039635354736424893 0.0007184647024735757 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 140407 12330 YRFGDSQQL True PC9_epitope_Rep2 1112.5250722892 1112.5239699358601 52.74 2 0.2123550151368334 0.00039635354736424893 0.0007185266705830772 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 118717 18254 TYTSYLDKF True PC9_epitope_Rep2 1136.5389910178399 1136.5378899358602 75.533 2 0.2123425844221321 0.00039635354736424893 0.0007187322173275003 ['ENSG00000069956|ENST00000261845|MAPK6'] 142896 19306 YYTTPIYRF True PC9_epitope_Rep5 1222.60225998074 1222.60116993586 79.306 2 0.21232123894316743 0.00039635354736424893 0.0007190853108334937 ['ENSG00000104957|ENST00000221554|YJU2B'] 12231 11373 DIISDTSGDFR True H1975_Epitope_Rep1 1224.5622456435601 1224.5611499358602 48.725 2 0.21231230169108115 0.00039635354736424893 0.0007192332011155488 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 24880 15486 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 71.738 2 0.21230907569340401 0.00039635354736424893 0.0007192865912055833 ['ENSG00000204592|ENST00000376630|HLA-E'] 46678 9432 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 41.247 2 0.21230710227044947 0.00039635354736424893 0.0007193192532107403 ['ENSG00000170348|ENST00000303575|TMED10'] 134138 20114 VYLDKFIRL True PC9_epitope_Rep3 1165.68593003505 1165.68482993586 82.62 2 0.21230535356514307 0.00039635354736424893 0.0007193481971710771 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 68066 17362 LTDLVDDNYFY True H1975_Epitope_Rep1 1376.6136125100802 1376.61250993586 72.248 2 0.2123011086901329 0.00039635354736424893 0.0007194184617227294 ['ENSG00000174231|ENST00000304992|PRPF8'] 17793 17000 EHSLVIDTL True PC9_epitope_Rep2 1025.53932537101 1025.53822993586 70.641 2 0.2122930346294202 0.00039635354736424893 0.000719552129011262 ['ENSG00000143256|ENST00000368010|PFDN2'] 38599 13706 HEYPWILSA True NCI_RA007_Epitope_Rep3 1114.54474510462 1114.54364993586 61.229 2 0.21229186151837465 0.00039635354736424893 0.0007195715521139845 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 108388 19440 SYLESFYHM True PC9_epitope_Rep4 1175.49574630687 1175.49464993586 82.889 2 0.21228464604358477 0.00039635354736424893 0.000719691029702708 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 89465 20605 QYFDSRGMFI True PC9_epitope_Rep5 1262.5753936098997 1262.5742899358602 84.306 2 0.21228399329365644 0.00039635354736424893 0.0007197018392576 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 54681 16947 KYLSVQGQLF True PC9_epitope_Rep6 1181.64445914589 1181.6433699358602 77.73 2 0.2122829878956303 0.00039635354736424893 0.0007197184889923464 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 42776 9957 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 43.29 2 0.21227098999478025 0.00039635354736424893 0.0007199172081539827 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 66126 9309 LSELKPMSY True H1975_Epitope_Rep3 1066.53688284286 1066.53578993586 40.802 2 0.21226936092075038 0.00039635354736424893 0.0007199441944704311 ['TMTC3|p.K629Qfs*3|1|0.1|ENSG00000139324|chr12:88192781-88192782|-/C|frameshift_variant', 'ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 25339 11090 FDVSGYPTLK True NCI_RA007_Epitope_Rep2 1125.57062549929 1125.5695299358601 47.718 2 0.21225685583621023 0.00039635354736424893 0.000720151380408738 ['ENSG00000155660|ENST00000652332|PDIA4'] 9319 2605 AVQRTLLEK True NCI_RA007_Epitope_Rep3 1056.6291434349198 1056.6280499358602 14.723 2 0.2122559448328072 0.00039635354736424893 0.0007201664763743249 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 9831 16032 AYLEAIHNF True PC9_epitope_Rep6 1076.52909504048 1076.5279899358602 73.991 2 0.2122533537898121 0.00039635354736424893 0.0007202094135103878 ['ENSG00000042753|ENST00000263270|AP2S1'] 109471 16418 TDLLLEPYNK True PC9_epitope_Rep2 1204.6339540318397 1204.6328499358601 68.396 2 0.21224064745994384 0.00039635354736424893 0.0007204200120071554 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 2416 10245 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 44.413 2 0.21223488916533956 0.00039635354736424893 0.0007205154720409024 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 95420 16396 RWFQPAIPSW True NCI_RA007_Epitope_Rep1 1286.6560268890996 1286.65492993586 67.889 2 0.21223105726134742 0.00039635354736424893 0.000720579003729447 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 76853 18889 NRDELELEL True PC9_epitope_Rep5 1129.5615173675699 1129.5604299358602 77.676 2 0.21222134648008242 0.00039635354736424893 0.0007207400304102469 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 137661 16883 YEILTPNSIPK True PC9_epitope_Rep2 1273.69180326113 1273.69070993586 70.187 2 0.21221853221344522 0.00039635354736424893 0.0007207867040531256 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 89568 19811 QYMKIISSF True PC9_epitope_Rep1 1115.5685173243098 1115.56740993586 81.018 2 0.21221702319902508 0.00039635354736424893 0.0007208117317864745 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 136036 16362 WRDPDEPVL True PC9_epitope_Rep1 1125.5454733806098 1125.54436993586 67.756 2 0.21221559194857928 0.00039635354736424893 0.0007208354705723915 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 139068 10502 YLDDPDLKY True H1975_Epitope_Rep2 1140.5339056374 1140.5333749679298 45.414 1 0.21220842249900496 0.00039635354736424893 0.0007209543951997873 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 24231 7212 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56899490379 32.753 3 0.2122018770563959 0.00039635354736424893 0.0007210629861809378 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 140858 7697 YSDSLVQKGY True H1975_Epitope_Rep2 1158.5557037111398 1158.55460993586 34.561 2 0.21219514800654654 0.00039635354736424893 0.0007211746403718351 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 112088 6646 TIVEEVQDGK True H1975_Epitope_Rep3 1116.5662683948397 1116.56516993586 30.519 2 0.2121911594866974 0.00039635354736424893 0.0007212408295163643 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2'] 4226 11091 AIDEDVLRY True H1975_Epitope_Rep2 1092.54513902744 1092.5440499358601 47.696 2 0.21218916686519076 0.00039635354736424893 0.0007212738991822601 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 57637 7255 LEEEGEQFVK True H1975_Epitope_Rep1 1206.5768330785397 1206.5757299358602 32.917 2 0.21218530928610266 0.00039635354736424893 0.0007213379241192725 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'nc|ENSG00000116171|P22307-6|SCP2', 'nc|ENSG00000116171|P22307-2|SCP2', 'nc|ENSG00000116171|P22307-4|SCP2'] 78309 21971 NYIPRFWTF True PC9_epitope_Rep5 1242.6185787512197 1242.61748993586 89.544 2 0.21218027511058318 0.00039635354736424893 0.0007214214858159 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 78391 22159 NYLDRFLSL True PC9_epitope_Rep5 1139.59750895347 1139.59640993586 90.272 2 0.21217741801072165 0.00039635354736424893 0.0007214689148057419 ['ENSG00000110092|ENST00000227507|CCND1'] 54002 16210 KVFDPVPVGV True PC9_epitope_Rep6 1055.60153170475 1055.6004299358601 74.706 2 0.21216894617234183 0.00039635354736424893 0.0007216095690720889 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 126913 8052 VLQSFTVDSSK True H1975_Epitope_Rep3 1209.62411762413 1209.6230299358601 35.945 2 0.21216489227023852 0.00039635354736424893 0.0007216768839861994 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 68183 7803 LTDRGVMSY True H1975_Epitope_Rep3 1040.49608066004 1040.49498993586 34.997 2 0.21216047872965452 0.00039635354736424893 0.0007217501778490556 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 47955 17552 IYISTLKTEF True PC9_epitope_Rep6 1213.6594405036901 1213.65834993586 80.153 2 0.21216029802243438 0.00039635354736424893 0.000721753178939077 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 69576 9300 LVDGYNVHY True H1975_Epitope_Rep2 1078.5083595959002 1078.5072699358602 40.73 2 0.21215874504155208 0.00039635354736424893 0.0007217789705410652 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB', 'ENST00000538021.5_2_11:72004413-72018253:-|nuORF'] 70785 20333 LYANMFERL True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 83.46 2 0.21215796213871516 0.00039635354736424893 0.0007217919731884562 ['ENSG00000004478|ENST00000001008|FKBP4'] 82968 11437 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.4749499358602 48.972 2 0.21214286012754605 0.00039635354736424893 0.0007220428371866186 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 137782 8748 YEQELKDLAA True H1975_Epitope_Rep1 1178.5819184589798 1178.58082993586 38.579 2 0.2121399493550851 0.00039635354736424893 0.0007220911989476197 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 73231 14399 MSDSYLPSYY True H1975_Epitope_Rep2 1224.5008912569601 1224.49978993586 60.535 2 0.21212215373774268 0.00039635354736424893 0.0007223869393862296 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 106302 11890 STFQQMWISK True NCI_RA007_Epitope_Rep4 1254.60669373818 1254.60558993586 52.731 2 0.21211140900675504 0.00039635354736424893 0.0007225655619312039 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 28688 12670 FSQPENQNLLY True H1975_Epitope_Rep2 1351.64083031743 1351.63972993586 53.835 2 0.21210619283722354 0.00039635354736424893 0.0007226522925482208 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2'] 12330 14286 DIQLTQSPSF True NCI_RA007_Epitope_Rep5 1134.55570371114 1134.55460993586 61.644 2 0.21210315805576413 0.00039635354736424893 0.0007227027574604686 ['nc|ENSG00000241755|A0A0C4DH69|IGKV1-9'] 49478 20356 KFAEEFYSF True PC9_epitope_Rep5 1166.5284263341398 1166.5278749679298 83.334 1 0.21210191927351071 0.00039635354736424893 0.0007227233579954525 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 37755 21442 GWYDEEHPLVF True PC9_epitope_Rep3 1390.6193665968601 1390.61826993586 87.768 2 0.21209059321360627 0.00039635354736424893 0.0007229117339072796 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 7171 5128 AQYEEIAQR True H1975_Epitope_Rep2 1106.5356369728997 1106.53452993586 24.8 2 0.21208060585689267 0.00039635354736424893 0.0007230778852746977 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 8252 12995 ATGSWDSFLK True NCI_RA007_Epitope_Rep2 1110.53457434374 1110.53346993586 55.173 2 0.21207714331696104 0.00039635354736424893 0.0007231354976223927 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 95421 16710 RWFQPAIPSW True NCI_RA007_Epitope_Rep2 1286.6560268890996 1286.65492993586 69.731 2 0.21207120864115306 0.00039635354736424893 0.00072323425394081 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 54523 19365 KYIENLDNITF True PC9_epitope_Rep4 1368.6925315371197 1368.69142993586 82.597 2 0.2120652371261596 0.00039635354736424893 0.0007233336369414132 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 16529 11268 EELNADLFR True H1975_Epitope_Rep3 1105.5403880001697 1105.53928993586 48.445 2 0.212063736225142 0.00039635354736424893 0.0007233586183595877 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 29036 8981 FTEQYNEQY True H1975_Epitope_Rep2 1220.4985827578398 1220.4974899358601 39.5 2 0.21206065556599654 0.00039635354736424893 0.0007234098964276068 ['ENSG00000173914|ENST00000310046|RBM4B'] 43354 6198 IGAEVYHNLK True NCI_RA007_Epitope_Rep1 1142.60840799034 1142.6067749037902 28.144 3 0.21205880968571914 0.00039635354736424893 0.0007234406231496291 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 95177 19231 RVIDDSLVVGV True PC9_epitope_Rep3 1170.66083748602 1170.6597499358602 79.192 2 0.21205472287209154 0.00039635354736424893 0.000723508657348614 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 116747 13990 TVDNVQPLLY True H1975_Epitope_Rep2 1160.607739284 1160.60664993586 58.962 2 0.212054536062979 0.00039635354736424893 0.000723511767359607 ['ENSG00000145332|ENST00000273963|KLHL8'] 129084 12192 VQPSKYHFL True PC9_epitope_Rep3 1117.5920296502102 1117.59092993586 51.929 2 0.21205332673511137 0.00039635354736424893 0.0007235319006578305 ['ENSG00000177383|ENST00000317897|MAGEF1'] 142737 14533 YYQHIVTTL True PC9_epitope_Rep2 1136.5866099166 1136.58550993586 61.173 2 0.2120464433054778 0.00039635354736424893 0.0007236465090217499 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 96738 11736 SALSGHLETV True PC9_epitope_Rep5 1012.5189242796 1012.51782993586 50.144 2 0.21203609031225668 0.00039635354736424893 0.0007238189195463222 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 139060 10252 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 44.376 2 0.21203321466069103 0.00039635354736424893 0.000723866815676048 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 125190 21145 VIIDQLPDL True PC9_epitope_Rep4 1024.580461907 1024.57936993586 89.497 2 0.2120328920694386 0.00039635354736424893 0.0007238721888732297 ['ENSG00000070018|ENST00000261349|LRP6'] 118689 12766 TYTDVTPRQF True PC9_epitope_Rep2 1226.59315184902 1226.5920499358601 54.41 2 0.212032889217668 0.00039635354736424893 0.0007238722363735353 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 90593 9518 REMEENFAVEA True H1975_Epitope_Rep2 1323.57651580871 1323.57540993586 41.581 2 0.21202036405559171 0.00039635354736424893 0.0007240808909827626 ['ENSG00000026025|ENST00000544301|VIM'] 142742 15363 YYQHIVTTL True PC9_epitope_Rep5 1136.5866099166 1136.58550993586 64.103 2 0.21202012539662812 0.00039635354736424893 0.0007240848673488678 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 74928 19574 NHIPVFSPAL True PC9_epitope_Rep3 1093.59202965021 1093.59092993586 80.526 2 0.21201876542959744 0.00039635354736424893 0.0007241075265715232 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000595844.5_1_19:12787852-12790977:-|nuORF', 'nc|ENSG00000095059|P49366-2|DHPS'] 85865 17838 QHFDSVMQL True PC9_epitope_Rep1 1103.5069796969099 1103.50588993586 73.408 2 0.21201645769297045 0.00039635354736424893 0.0007241459787771782 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 72258 14910 MHSDMIYNV True PC9_epitope_Rep1 1108.4681516600401 1108.4670499358601 62.173 2 0.2120155988109773 0.00039635354736424893 0.0007241602902518252 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 45488 14939 IQLVEEELDR True PC9_epitope_Rep4 1242.6455813446998 1242.64448993586 65.403 2 0.21200074215411502 0.00039635354736424893 0.000724407890323425 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 52708 7134 KM[Oxidation]DDLNLHY True H1975_Epitope_Rep2 1163.52810944475 1163.5270099358602 32.373 2 0.211999756785113 0.00039635354736424893 0.0007244243154219876 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 110116 4583 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 22.733 2 0.2119990396996299 0.00039635354736424893 0.0007244362687421921 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 49144 8841 KELEEIVQP True NCI_RA007_Epitope_Rep4 1083.5811901829898 1083.58008993586 40.817 2 0.21199664408755267 0.00039635354736424893 0.0007244762033773424 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000509378.1_1_4:165110937-165111516:+|nuORF'] 114978 17634 TQYPFDFRGA True PC9_epitope_Rep4 1200.5563724174797 1200.55526993586 75.852 2 0.21199584467798113 0.00039635354736424893 0.0007244895299535724 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 190 9800 AAENEFVVLK True H1975_Epitope_Rep1 1118.5971746003 1118.5960699358602 42.624 2 0.21199395252446726 0.00039635354736424893 0.0007245210741236457 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'CON__Q6IME9'] 53377 12401 KQTDVLQQL True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 55.505 2 0.21199163164325763 0.00039635354736424893 0.0007245597675126634 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 130264 9767 VSGGLEVLAEK True NCI_RA007_Epitope_Rep1 1100.607739284 1100.60664993586 41.994 2 0.21198558492683062 0.00039635354736424893 0.0007246605872141064 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF', 'nc|ENSG00000248546|O43423|ANP32CP'] 111152 16680 THFQLAYRL True PC9_epitope_Rep1 1147.6138277239497 1147.61218490379 68.988 3 0.2119816206436023 0.00039635354736424893 0.0007247266931816306 ['ENSG00000106144|ENST00000310447|CASP2', 'nc|ENSG00000106144|P42575-2|CASP2', 'ENST00000493642.5_1_7:142986735-143000877:+|nuORF'] 88977 8505 QVIGVVLQK True NCI_RA007_Epitope_Rep5 982.6175161220598 982.61640993586 39.397 2 0.21198026009269175 0.00039635354736424893 0.0007247493822927378 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 38209 8067 HEAESVLAV True H1975_Epitope_Rep2 953.4818104948898 953.48070993586 35.977 2 0.21197622784251688 0.00039635354736424893 0.0007248166299545565 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 23002 9501 EVFEDAAEIR True H1975_Epitope_Rep3 1177.5615173675699 1177.5604299358602 41.55 2 0.2119695898861002 0.00039635354736424893 0.0007249273477951247 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 78363 14984 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.6069699358602 62.764 2 0.21196817116113684 0.00039635354736424893 0.0007249510136288621 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 116707 13783 TVDEHVWFY True H1975_Epitope_Rep3 1194.53457434374 1194.53346993586 58.32 2 0.211960597837157 0.00039635354736424893 0.0007250773578006844 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 95426 16157 RWFQPAIPSW True NCI_RA007_Epitope_Rep5 1286.6560268890996 1286.65492993586 68.886 2 0.2119431594436142 0.00039635354736424893 0.0007253683628601945 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 53792 13083 KTDDLTMVLY True H1975_Epitope_Rep1 1197.59512599497 1197.5940299358601 55.413 2 0.21193338547813656 0.00039635354736424893 0.0007255315181962929 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 27906 12326 FQEAEEFLYR True NCI_RA007_Epitope_Rep1 1330.61936659686 1330.61826993586 51.916 2 0.2119280930778525 0.00039635354736424893 0.0007256198788039915 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000560592.5_1_14:24614852-24615790:-|nuORF', 'ENST00000559493.5_1_14:24614434-24615772:-|nuORF'] 133086 9684 VVQDGITLITK True NCI_RA007_Epitope_Rep3 1185.69688864157 1185.6957899358601 45.169 2 0.21192403711572236 0.00039635354736424893 0.0007256876034534067 ['ENSG00000079246|ENST00000392132|XRCC5'] 41395 21739 HYFDPQYFEF True PC9_epitope_Rep5 1391.58225281215 1391.5811499358601 88.65 2 0.21191144018549302 0.00039635354736424893 0.0007258979818215443 ['ENSG00000084623|ENST00000677711|EIF3I'] 61995 9358 LLDPSQKNLY True H1975_Epitope_Rep1 1189.63428838501 1189.6331899358602 40.903 2 0.21190913273528295 0.00039635354736424893 0.0007259365246349455 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 48375 21293 IYTKIMDLI True PC9_epitope_Rep1 1108.620218544 1108.6191299358602 86.731 2 0.21190580050744276 0.00039635354736424893 0.0007259921885866595 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 12746 6712 DLEGSDIDTR True NCI_RA007_Epitope_Rep2 1119.5043964142699 1119.50328993586 30.72 2 0.21190382374925143 0.00039635354736424893 0.0007260252118134945 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'CSE1L|p.R383P|1|0.22|ENSG00000124207|chr20:49075333-49075333|G/C|missense_variant'] 140406 12797 YRFETVQKL True PC9_epitope_Rep5 1182.6397081186199 1182.63805490379 54.234 3 0.211888985460413 0.00039635354736424893 0.0007262731446670981 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 95962 8026 RYLEQLHQL True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64474993586 38.663 2 0.21188640295903868 0.00039635354736424893 0.0007263163043405205 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 141683 11450 YTTDRVMTV True PC9_epitope_Rep3 1084.5222954078802 1084.52118993586 49.04 2 0.21187964308739685 0.00039635354736424893 0.0007264292898823832 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 127094 9294 VLTEIIASR True H1975_Epitope_Rep3 1000.5916952970399 1000.59058993586 40.744 2 0.21187463784364724 0.00039635354736424893 0.0007265129596638845 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 134064 9356 VYKDHQTITI True PC9_epitope_Rep5 1216.6451874218799 1216.6440899358602 40.943 2 0.21186648244368517 0.00039635354736424893 0.0007266493095074155 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 89024 21806 QVLEDFPTI True PC9_epitope_Rep1 1060.54407639828 1060.5429699358601 88.692 2 0.21186624545367258 0.00039635354736424893 0.0007266532721189053 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 128352 7572 VPQQALVIR True H1975_Epitope_Rep1 1022.6236641316598 1022.62256993586 34.116 2 0.21186544335504634 0.00039635354736424893 0.0007266666838374874 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4'] 14430 8381 DTDYRSMEY True H1975_Epitope_Rep2 1178.4550036936998 1178.45390993586 37.191 2 0.21186471116801692 0.00039635354736424893 0.0007266789267961244 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 70791 16934 LYANM[Oxidation]FERL True PC9_epitope_Rep5 1171.56958033391 1171.56848993586 70.152 2 0.21185630235777803 0.00039635354736424893 0.0007268195460303376 ['ENSG00000004478|ENST00000001008|FKBP4'] 70968 12521 LYGRHFNYL True PC9_epitope_Rep4 1181.59817765981 1181.5970899358601 55.982 2 0.21184027651735207 0.00039635354736424893 0.0007270876192844633 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 17113 9456 EGLTSIEEVTK True H1975_Epitope_Rep1 1204.61869789052 1204.6176099358602 41.289 2 0.2118391166654919 0.00039635354736424893 0.000727107024628514 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 29839 16515 FVSISDLLVPK True H1975_Epitope_Rep1 1216.7067250492798 1216.70562993586 68.898 2 0.21182786328776032 0.00039635354736424893 0.0007272953305385309 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 96285 9658 RYQTQPVTL True PC9_epitope_Rep4 1104.5927579261997 1104.5916699358602 44.774 2 0.2118273960255167 0.00039635354736424893 0.0007273031504259331 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 131420 15796 VTIEDVQKL True PC9_epitope_Rep2 1043.58627556343 1043.5851699358602 66.022 2 0.2118262637084861 0.00039635354736424893 0.0007273221007162653 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 53903 5092 KTNAIISLK True NCI_RA007_Epitope_Rep3 986.61243074162 986.61132993586 27.021 2 0.2118186414305883 0.00039635354736424893 0.0007274496789236785 ['ENST00000539028.1_1_12:10010098-10010200:-|nuORF'] 114639 8159 TQDTQPHYI True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 36.361 2 0.21181024407329357 0.00039635354736424893 0.0007275902560489186 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 54314 13843 KYDEIFYNL True NCI_RA007_Epitope_Rep3 1203.5811901829898 1203.58008993586 61.781 2 0.21180945356558237 0.00039635354736424893 0.0007276034910565399 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 74044 8659 NDLAVVDVR True NCI_RA007_Epitope_Rep4 999.53490869691 999.53380993586 40.089 2 0.2118068813918468 0.00039635354736424893 0.0007276465571265408 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 54403 21796 KYFGGVLEYF True PC9_epitope_Rep5 1221.6070110080097 1221.6059099358602 88.87 2 0.21179990182785663 0.00039635354736424893 0.000727763429299957 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 77348 5515 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 26.225 2 0.2117991773290963 0.00039635354736424893 0.0007277755620456544 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 22272 10937 ETDEKDFYL True H1975_Epitope_Rep2 1158.5080848123798 1158.50698993586 47.102 2 0.21179669914926413 0.00039635354736424893 0.0007278170641694968 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 139114 12288 YLDPAQQNLY True H1975_Epitope_Rep3 1223.5822528121503 1223.5811499358601 52.444 2 0.21179444016379892 0.00039635354736424893 0.0007278548975099319 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 48237 19948 IYQKAFDLI True PC9_epitope_Rep5 1109.6120963884498 1109.61098993586 81.785 2 0.21179254428469416 0.00039635354736424893 0.0007278866510917266 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 52519 9611 KLDVQFSGLTK True NCI_RA007_Epitope_Rep1 1234.6921376142998 1234.69048490379 41.382 3 0.21178448760265786 0.00039635354736424893 0.0007280216058491622 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 94941 12409 RTIFPLFMK True NCI_RA007_Epitope_Rep3 1151.6525217317899 1151.65142993586 56.019 2 0.21177399501138694 0.00039635354736424893 0.0007281974013358323 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000473857.5_1_20:36384780-36460672:+|nuORF', 'nc|ENSG00000132792|Q8WYA6-3|CTNNBL1', 'nc|ENSG00000132792|Q8WYA6-2|CTNNBL1'] 112453 7384 TLDENPGVRY True H1975_Epitope_Rep2 1162.56185172074 1162.56074993586 33.343 2 0.21177265568852505 0.00039635354736424893 0.000728219843749409 ['ENSG00000116266|ENST00000370008|STXBP3', 'STXBP3|p.G375Wfs*3|1|0.32|ENSG00000116266|chr1:108796243-108796244|-/T|frameshift_variant'] 89617 17681 QYQKVPVLF True PC9_epitope_Rep4 1120.6280808057597 1120.6269899358601 76.034 2 0.21175915402857434 0.00039635354736424893 0.0007284461235809286 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 77118 8706 NRMLAQQAV True PC9_epitope_Rep3 1029.53894853153 1029.53784993586 38.438 2 0.21175689726728655 0.00039635354736424893 0.0007284839524451214 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 115632 9767 TRVSQINTL True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 42.43 2 0.21175647507542303 0.00039635354736424893 0.0007284910296369544 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 47319 10054 IVEIPFNSTNK True H1975_Epitope_Rep1 1260.67140216972 1260.6703099358601 43.613 2 0.21175630832402673 0.00039635354736424893 0.0007284938249055169 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 134736 9062 VYTSGVYHI True NCI_RA007_Epitope_Rep4 1037.51819600361 1037.51767496793 41.69 1 0.21175564986378842 0.00039635354736424893 0.0007285048628384921 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 63255 11469 LLSNDEVTIK True PC9_epitope_Rep2 1130.6183039677 1130.61720993586 49.434 2 0.21175124031123027 0.00039635354736424893 0.0007285787855907605 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 54621 10393 KYLDNPNAL True PC9_epitope_Rep4 1046.53965972418 1046.53856993586 47.678 2 0.2117161770963258 0.00039635354736424893 0.0007291668612887624 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 103142 11527 SPIENIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 49.218 2 0.21170901259540265 0.00039635354736424893 0.0007292870819534604 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 15025 16183 DYLEVAKHF True PC9_epitope_Rep2 1120.55530978832 1120.5542099358602 67.5 2 0.21169846846796753 0.00039635354736424893 0.0007294640490822554 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.L126Pfs*6|1|0.29|ENSG00000128272|chr22:39521916-39521917|-/C|frameshift_variant'] 18854 12075 ELDPTNMTY True H1975_Epitope_Rep2 1082.45902644498 1082.4579299358602 51.529 2 0.2116879054326083 0.00039635354736424893 0.0007296413767514866 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 42046 15379 IDIIPNPQER True PC9_epitope_Rep3 1193.64043639461 1193.6393299358601 64.311 2 0.21168750016205246 0.00039635354736424893 0.0007296481811197309 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 28527 8303 FSEEQLNRY True H1975_Epitope_Rep3 1184.5462016565998 1184.5451099358602 36.921 2 0.2116836714367025 0.00039635354736424893 0.0007297124673850978 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 63992 5455 LNVTEQEKIDK True NCI_RA007_Epitope_Rep1 1315.69834519355 1315.69669490379 25.292 3 0.2116698797519627 0.00039635354736424893 0.0007299440839625468 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 137134 18100 YAVDAYFREA True PC9_epitope_Rep1 1203.55603806431 1203.5549499358601 74.414 2 0.21166775983286343 0.00039635354736424893 0.0007299796922733547 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 104125 3963 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 21.463 2 0.21165442600895207 0.00039635354736424893 0.0007302037006577446 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 126912 7903 VLQSFTVDSSK True H1975_Epitope_Rep1 1209.62411762413 1209.6230299358601 35.35 2 0.21164992803261776 0.00039635354736424893 0.0007302792822639209 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 138489 14715 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 61.423 2 0.21163958291506788 0.00039635354736424893 0.0007304531459138017 ['ENSG00000115306|ENST00000356805|SPTBN1'] 15091 18654 DYTIGFGKF True PC9_epitope_Rep6 1046.50729696674 1046.5061899358602 84.396 2 0.21162063976925283 0.00039635354736424893 0.0007307716186759354 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 88534 19438 QTAPEEAFIKL True PC9_epitope_Rep5 1245.6605031328497 1245.6594099358601 79.818 2 0.211613449320705 0.00039635354736424893 0.0007308925411947029 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 23677 19405 EYDLIVHQL True PC9_epitope_Rep2 1128.58152453616 1128.5804299358601 80.019 2 0.21161291511536318 0.00039635354736424893 0.0007309015257824152 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 142500 21319 YYIFIPSKF True PC9_epitope_Rep1 1176.6219327961599 1176.62082993586 86.831 2 0.21161217270652866 0.00039635354736424893 0.0007309140122460759 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 4245 11803 AIDQLHLEY True H1975_Epitope_Rep2 1100.5502244078798 1100.54912993586 50.476 2 0.21160845052224797 0.00039635354736424893 0.0007309766183357551 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 137527 6650 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 30.532 2 0.21160800485976955 0.00039635354736424893 0.000730984114613573 ['ENSG00000127184|ENST00000247655|COX7C'] 9754 20673 AYIDYLSHL True PC9_epitope_Rep2 1093.54441075145 1093.5433099358602 84.955 2 0.21160425938661098 0.00039635354736424893 0.0007310471184945695 ['ENSG00000176102|ENST00000323959|CSTF3'] 134126 19861 VYLDHAGATLF True PC9_epitope_Rep3 1205.6080736371698 1205.6069699358602 81.632 2 0.21159840123316287 0.00039635354736424893 0.0007311456714157856 ['ENSG00000075643|ENST00000261326|MOCOS'] 60937 12517 LIDADPYLKY True H1975_Epitope_Rep2 1209.62814037541 1209.6270499358602 53.24 2 0.21159205571072162 0.00039635354736424893 0.0007312524384851855 ['ENSG00000145386|ENST00000274026|CCNA2'] 40524 7749 HRDYETATL True PC9_epitope_Rep5 1104.51998690876 1104.5188899358602 34.748 2 0.211582059314192 0.00039635354736424893 0.0007314206653451104 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 108252 15381 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.5695299358601 68.06 2 0.21157889747115513 0.00039635354736424893 0.0007314738832942256 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 94857 20920 RSYDFEFMQV True PC9_epitope_Rep1 1320.58087291316 1320.5797699358602 85.291 2 0.2115742926710018 0.00039635354736424893 0.0007315513950456174 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 105842 8227 SSLNLRETNLD True NCI_RA007_Epitope_Rep3 1260.63099390972 1260.62988993586 39.497 2 0.21157214657954151 0.00039635354736424893 0.0007315875226224263 ['ENSG00000026025|ENST00000544301|VIM'] 14948 9423 DYFEEYGK True H1975_Epitope_Rep3 1049.4341915961297 1049.4330899358602 41.247 2 0.21155638059519152 0.00039635354736424893 0.0007318529840935831 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 14994 15451 DYKESFNTI True PC9_epitope_Rep1 1115.5135045459901 1115.5124099358602 64.253 2 0.21155107521702554 0.00039635354736424893 0.0007319423357039873 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 109131 17587 TALVELLK True PC9_epitope_Rep2 885.5535188831699 885.55242993586 72.926 2 0.211543607368523 0.00039635354736424893 0.0007320681255462686 ['CON__P02769'] 119823 5945 VDATAETDLAK True H1975_Epitope_Rep3 1132.5611830144 1132.56008993586 27.878 2 0.21154157334779616 0.00039635354736424893 0.0007321023907313521 ['ENSG00000155660|ENST00000652332|PDIA4'] 89440 20735 QYEEQFVTL True PC9_epitope_Rep5 1155.5448046742697 1155.54370993586 84.816 2 0.21154137288754632 0.00039635354736424893 0.0007321057677789133 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 38307 7648 HEFLHEVPAA True NCI_RA007_Epitope_Rep4 1148.56145779792 1148.56036993586 36.073 2 0.2115290881110308 0.00039635354736424893 0.0007323127527259134 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 141176 18462 YSVDRLYEL True PC9_epitope_Rep4 1156.5764391557198 1156.57534993586 79.084 2 0.21151126589853045 0.00039635354736424893 0.0007326131417459714 ['ENSG00000084774|ENST00000264705|CAD'] 49521 7228 KFIDTTSKF True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 34.48 2 0.21150882534789742 0.00039635354736424893 0.0007326542862505375 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 72306 8364 M[Oxidation]IEPRTLQY True H1975_Epitope_Rep2 1165.58014501761 1165.5790499358602 37.125 2 0.21150643014374707 0.00039635354736424893 0.0007326946685265842 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 77022 14307 NRIEELNQSL True PC9_epitope_Rep1 1214.62551460646 1214.62440993586 59.857 2 0.21150297378253563 0.00039635354736424893 0.0007327529454633331 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L', 'ENST00000543152.5_1_16:19590306-19619547:+|nuORF'] 72905 19213 MPTLPPPSV True PC9_epitope_Rep5 937.49428975489 937.49318993586 78.942 2 0.21149631683228995 0.00039635354736424893 0.0007328651999231798 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 54501 13403 KYIDQKFVL True PC9_epitope_Rep4 1152.6542955536 1152.65263490379 59.455 3 0.21149358528849366 0.00039635354736424893 0.0007329112662439961 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 140875 9500 YSEDHIIGAY True H1975_Epitope_Rep1 1166.5244035828598 1166.5233099358602 41.462 2 0.21148068989428964 0.00039635354736424893 0.0007331287808000414 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 42270 17711 IDTIEIITDR True PC9_epitope_Rep4 1187.63976768827 1187.6386699358602 76.151 2 0.21147303250383895 0.00039635354736424893 0.0007332579733675793 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 120659 7675 VEILANDQGNR True PC9_epitope_Rep3 1227.6207635791898 1227.6196699358602 34.519 2 0.21147289296825791 0.00039635354736424893 0.0007332603277705083 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 48088 11284 IYNGDMEKI True PC9_epitope_Rep2 1081.51139637101 1081.51028993586 48.729 2 0.21146869446743685 0.00039635354736424893 0.0007333311731962223 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 95132 19621 RVFIGNLNTL True PC9_epitope_Rep5 1145.65569253593 1145.65458993586 80.525 2 0.2114610057943711 0.00039635354736424893 0.0007334609295280892 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 29040 8979 FTEQYNEQY True H1975_Epitope_Rep3 1220.4985827578398 1220.49807496793 39.533 1 0.21145828888853466 0.00039635354736424893 0.0007335067863462307 ['ENSG00000173914|ENST00000310046|RBM4B'] 23925 13143 EYLENALKL True NCI_RA007_Epitope_Rep5 1091.58627556343 1091.5851699358602 57.232 2 0.2114537873679049 0.00039635354736424893 0.0007335827708029962 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6', 'GBP6|p.L464Tfs*13|1|0.05|ENSG00000183347|chr1:89383674-89383681|TCCTGGAG/-|frameshift_variant'] 141211 9211 YTADGKEVLEY True H1975_Epitope_Rep3 1286.6030478263801 1286.6019499358601 40.422 2 0.21145300615804577 0.00039635354736424893 0.0007335959582193222 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 101694 9992 SLMHSFILK True NCI_RA007_Epitope_Rep5 1074.5895871220598 1074.58848993586 45.076 2 0.21143288517593814 0.00039635354736424893 0.0007339356976602295 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 84246 18021 PYNDYFEYF True NCI_RA007_Epitope_Rep3 1256.50260550912 1256.5015099358602 78.969 2 0.21141598880754595 0.00039635354736424893 0.0007342211119665806 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 73992 10041 NDEELNKLLGK True NCI_RA007_Epitope_Rep1 1271.6721304457099 1271.67049490379 43.065 3 0.21141171705765646 0.00039635354736424893 0.0007342932882148258 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 78427 11175 NYLSHHLTI True PC9_epitope_Rep6 1096.5665431783602 1096.5654499358602 53.944 2 0.21139661835301957 0.00039635354736424893 0.0007345484556726486 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 76769 6770 NQWDGTQHGV True PC9_epitope_Rep6 1140.49483479008 1140.49372993586 34.858 2 0.21138310692168424 0.00039635354736424893 0.0007347768737044558 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 90248 11860 REEENYSFLP True H1975_Epitope_Rep2 1282.5829810881396 1282.58188993586 50.699 2 0.21136738041862851 0.00039635354736424893 0.0007350428284645989 ['ENST00000585041.1_1_17:17380355-17380580:+|nuORF', 'ENSG00000141026|ENST00000268711|MED9'] 20832 9331 EQISDIDDAVR True NCI_RA007_Epitope_Rep1 1259.59935942827 1259.5982699358601 40.289 2 0.21135374444633792 0.00039635354736424893 0.0007352735079187822 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 110004 5347 TEINSQRIAA True H1975_Epitope_Rep2 1101.5778361380499 1101.5767299358602 25.614 2 0.21135305649675717 0.00039635354736424893 0.0007352851478716856 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 135584 20460 WLAEKLPTL True PC9_epitope_Rep3 1069.61718176889 1069.6160899358601 83.955 2 0.21134454140313047 0.00039635354736424893 0.0007354292366563515 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 45362 8224 IQDNHDGTYTV True PC9_epitope_Rep1 1261.55749461629 1261.5563899358601 36.466 2 0.21134115456267882 0.00039635354736424893 0.0007354865552011252 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 8028 4029 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 20.572 2 0.21133754061435453 0.00039635354736424893 0.0007355477222394482 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 38597 14065 HEYPWILSA True H1975_Epitope_Rep3 1114.54474510462 1114.54364993586 59.424 2 0.21133495035859953 0.00039635354736424893 0.0007355915661481666 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 24220 5181 EYSKQMQRF True NCI_RA007_Epitope_Rep4 1215.57064258263 1215.56899490379 26.457 3 0.21133361706753268 0.00039635354736424893 0.000735614135093087 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 4846 10787 ALELDSNLYR True H1975_Epitope_Rep3 1192.60880191316 1192.6077099358602 46.572 2 0.2113186133169364 0.00039635354736424893 0.0007358681551609572 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 26220 11090 FHDNSGDVF True PC9_epitope_Rep2 1036.4250238947598 1036.42392993586 47.983 2 0.21131582867902396 0.00039635354736424893 0.0007359153099817672 ['ENSG00000132182|ENST00000254508|NUP210'] 39083 2834 HHTFYNELR True NCI_RA007_Epitope_Rep1 1215.57850484439 1215.57685490379 14.848 3 0.2113152915195883 0.00039635354736424893 0.000735924406542617 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 87799 9898 QRDQQLEAL True PC9_epitope_Rep5 1099.5621860739097 1099.56108993586 43.043 2 0.2113057938570583 0.00039635354736424893 0.0007360852639491797 ['nc|ENSG00000090615|Q08378-2|GOLGA3', 'GOLGA3|p.E756Sfs*55|1|0.47|ENSG00000090615|chr12:132796055-132796055|C/-|frameshift_variant', 'nc|ENSG00000090615|Q08378-4|GOLGA3', 'ENSG00000090615|ENST00000450791|GOLGA3'] 24861 16423 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 68.414 2 0.21128561483495975 0.00039635354736424893 0.0007364271435785715 ['ENSG00000204592|ENST00000376630|HLA-E'] 121464 5749 VEYETYKEA True H1975_Epitope_Rep2 1130.5131701928199 1130.5120699358602 27.111 2 0.21126757723567705 0.00039635354736424893 0.00073673287736344 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 40826 9662 HSDPSILGY True H1975_Epitope_Rep1 987.46616043075 987.46506993586 42.09 2 0.21126520647357808 0.00039635354736424893 0.0007367730707855002 ['ENSG00000146830|ENST00000678049|GIGYF1'] 115636 9982 TRVSQINTL True PC9_epitope_Rep3 1030.5771078620598 1030.5760099358602 43.351 2 0.21125516107254963 0.00039635354736424893 0.0007369434028983999 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 115578 8615 TRSTFSTNY True PC9_epitope_Rep3 1075.49343780775 1075.4923499358601 38.087 2 0.2112544487836683 0.00039635354736424893 0.000736955482131163 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 26927 9965 FLDKSGLQGY True H1975_Epitope_Rep3 1126.56587447202 1126.56476993586 43.364 2 0.21124725270510947 0.00039635354736424893 0.0007370775267760706 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM'] 140679 16753 YRVFTTQEL True PC9_epitope_Rep5 1155.5924235730297 1155.5913299358601 69.446 2 0.21124526696774618 0.00039635354736424893 0.0007371112082175865 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 104073 9473 SQDPYHETL True PC9_epitope_Rep5 1088.4774533904401 1088.47634993586 41.395 2 0.2112389418182283 0.00039635354736424893 0.0007372185036721916 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 88174 16818 QRVPLSVQL True PC9_epitope_Rep3 1038.61857875122 1038.61748993586 69.842 2 0.2112267795010497 0.00039635354736424893 0.0007374248608298102 ['ENSG00000125826|ENST00000356286|RBCK1'] 113498 15271 TLTEEGVIKV True PC9_epitope_Rep3 1087.6124903112698 1087.6113899358602 63.89 2 0.21121916010205075 0.00039635354736424893 0.0007375541681464097 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 75746 22084 NLLKLIAEV True PC9_epitope_Rep1 1011.6328318330299 1011.63172993586 89.757 2 0.21121753259090725 0.00039635354736424893 0.0007375817912651665 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 95933 13189 RYLEKPMEI True PC9_epitope_Rep1 1177.6165301458898 1177.6154299358602 55.595 2 0.21120570425997648 0.00039635354736424893 0.0007377825801492024 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 28397 16478 FRYPTTEEL True PC9_epitope_Rep3 1154.5607890915799 1154.5596899358602 68.52 2 0.21118776599680622 0.00039635354736424893 0.0007380871913167916 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 43810 12026 IHSENFQTL True PC9_epitope_Rep5 1087.5298233164701 1087.5287299358602 51.252 2 0.21118567885623613 0.00039635354736424893 0.0007381226414213459 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 54180 5776 KVTEGSFVYK True NCI_RA007_Epitope_Rep4 1156.61282466444 1156.61116490379 28.838 3 0.2111559894127038 0.00039635354736424893 0.0007386271019517905 ['ENSG00000057608|ENST00000380191|GDI2'] 61177 21528 LILDPIFKV True PC9_epitope_Rep2 1056.65831830488 1056.6572299358602 88.275 2 0.21115257829365242 0.00039635354736424893 0.0007386850832515098 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 23984 19073 EYMEHVYLI True PC9_epitope_Rep4 1195.5583465634297 1195.55724993586 81.455 2 0.2111283543445871 0.00039635354736424893 0.0007390969669110706 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 12398 9227 DITEEIM[Oxidation]SGAR True H1975_Epitope_Rep1 1236.5656171522799 1236.56450993586 40.401 2 0.21112243685934132 0.00039635354736424893 0.0007391976178672512 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000493299.1_1_3:184038318-184039070:+|nuORF'] 13330 14398 DLVFPSEIVGK True H1975_Epitope_Rep1 1202.65468947642 1202.65358993586 60.578 2 0.21111916146084303 0.00039635354736424893 0.0007392533352815119 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 134641 21327 VYSQFITQL True PC9_epitope_Rep1 1097.5757108797297 1097.57460993586 86.864 2 0.21111881566789498 0.00039635354736424893 0.0007392592177701115 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 6879 16581 AQIDHYLGL True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 76.226 2 0.21111069896316595 0.00039635354736424893 0.0007393973093299139 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 24845 11389 FAYDGKDYL True H1975_Epitope_Rep3 1090.4971262058598 1090.4960299358602 48.921 2 0.21108094527791602 0.00039635354736424893 0.0007399037376880691 ['ENSG00000204592|ENST00000376630|HLA-E'] 88584 13926 QTDNIIYVY True H1975_Epitope_Rep1 1127.5498900547097 1127.5487899358602 58.72 2 0.2110776988648556 0.00039635354736424893 0.000739959014942097 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 98179 6629 SESWTSHTV True H1975_Epitope_Rep3 1032.4512386426 1032.45014993586 30.452 2 0.21106445725180248 0.00039635354736424893 0.000740184525167011 ['ATG4C|p.N303Tfs*5|1|0.11|ENSG00000125703|chr1:62829148-62829148|C/-|frameshift_variant', 'ENSG00000125703|ENST00000317868|ATG4C'] 138321 15742 YHDINVYSL True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 72.778 2 0.21105842617735224 0.00039635354736424893 0.0007402872597480029 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 95648 8307 RYFDPANGKF True NCI_RA007_Epitope_Rep3 1213.5880068989297 1213.5869099358601 39.794 2 0.21105401938389476 0.00039635354736424893 0.0007403623350328525 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 47155 10280 ITVTSEVPFSK True NCI_RA007_Epitope_Rep5 1206.6496040959798 1206.6485099358601 46.172 2 0.21104782747986073 0.00039635354736424893 0.0007404678348348222 ['ENSG00000116251|ENST00000234875|RPL22'] 27998 21300 FQLEHIMDL True PC9_epitope_Rep3 1144.5586809166 1144.55758993586 87.226 2 0.21104508439941924 0.00039635354736424893 0.0007405145772087147 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 48207 19750 IYPVDLGDKF True PC9_epitope_Rep2 1165.6019256275697 1165.60082993586 81.357 2 0.2110403753610885 0.00039635354736424893 0.0007405948266111323 ['nc|ENSG00000163882|P52434-3|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H', 'nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H'] 22143 5083 ESSAGGSFTVR True H1975_Epitope_Rep1 1096.51490152832 1096.51380993586 24.623 2 0.2110370015013382 0.00039635354736424893 0.0007406523278403701 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 137501 6490 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 30.025 2 0.21103598191957756 0.00039635354736424893 0.0007406697056160629 ['ENSG00000127184|ENST00000247655|COX7C'] 105437 9310 SRTSIQSEL True PC9_epitope_Rep1 1019.52473793603 1019.52364993586 40.667 2 0.21103181861837744 0.00039635354736424893 0.0007407406692659955 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 4227 10987 AIDEDVLRY True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 47.35 2 0.21103057072707881 0.00039635354736424893 0.0007407619409561096 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 97919 4932 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 24.053 2 0.2110300009416723 0.00039635354736424893 0.0007407716537836053 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 23640 22069 EWSPYTKIFQF True PC9_epitope_Rep3 1444.7027022979998 1444.70160993586 90.185 2 0.21102498660943356 0.00039635354736424893 0.000740857135937202 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 67955 6870 LTDDKLSQY True H1975_Epitope_Rep2 1081.52915461013 1081.52804993586 31.344 2 0.2110167739822653 0.00039635354736424893 0.0007409971626095429 ['ENSG00000121879|ENST00000263967|PIK3CA'] 121353 6769 VEVILQHSA True NCI_RA007_Epitope_Rep3 994.5447451046201 994.54364993586 33.724 2 0.2110142740191845 0.00039635354736424893 0.0007410397926712314 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant', 'ENST00000472714.1_1_7:107569804-107570089:-|nuORF'] 109992 16927 TEIIILATR True PC9_epitope_Rep5 1028.62299542532 1028.62188993586 70.126 2 0.21100798093311418 0.00039635354736424893 0.0007411471150080883 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 118901 7429 VADKVHLMY True H1975_Epitope_Rep1 1074.55320161334 1074.55210993586 33.579 2 0.21100792259135492 0.00039635354736424893 0.0007411481100418374 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 2324 18965 AEPLEIILHLP True H1975_Epitope_Rep2 1243.71762408615 1243.71652993586 78.723 2 0.21100537168754235 0.00039635354736424893 0.0007411916176746304 ['ENSG00000100138|ENST00000401959|SNU13'] 16650 6456 EEQLQQIRAE True H1975_Epitope_Rep2 1242.6204292260197 1242.6193299358602 29.75 2 0.2109944955370421 0.00039635354736424893 0.0007413771475682763 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 106385 8589 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.5913299358601 40.855 2 0.21098643754257332 0.00039635354736424893 0.0007415146342324754 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 54399 19208 KYFGGVLEY True PC9_epitope_Rep5 1074.53859709502 1074.53750993586 78.923 2 0.2109830031674114 0.00039635354736424893 0.0007415732398112525 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 111377 9028 THSDIQVKL True PC9_epitope_Rep1 1039.56620882519 1039.5651099358602 39.576 2 0.21098069654185836 0.00039635354736424893 0.0007416126036192852 ['ENSG00000105223|ENST00000409735|PLD3'] 1510 6162 AEEMETGNVA True H1975_Epitope_Rep2 1049.4335399731299 1049.4324499358602 28.674 2 0.21097723670809682 0.00039635354736424893 0.0007416716514772865 ['ENSG00000162783|ENST00000367577|IER5'] 119855 9026 VDEVGGEALGR True PC9_epitope_Rep3 1100.5462016565998 1100.5451099358602 39.661 2 0.2109739956659686 0.00039635354736424893 0.0007417269695684487 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'CON__P02070', 'CON__Q3SX09'] 9835 17103 AYLEAYKEF True PC9_epitope_Rep2 1132.54407639828 1132.5429699358601 71.035 2 0.21096974376884736 0.00039635354736424893 0.0007417995472050956 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 101691 9592 SLMHSFILK True NCI_RA007_Epitope_Rep3 1074.5895871220598 1074.58848993586 44.816 2 0.2109519666997989 0.00039635354736424893 0.0007421030695546991 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 49101 8389 KEIEYVETVTS True H1975_Epitope_Rep1 1296.6449126383598 1296.6438099358602 37.196 2 0.2109488488359058 0.00039635354736424893 0.0007421563162206597 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 92584 5748 RMQKEITAL True NCI_RA007_Epitope_Rep1 1088.60121443492 1088.60010993586 26.415 2 0.21094815276969572 0.00039635354736424893 0.0007421682041150819 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 2362 5611 AEQAERYDDMA True H1975_Epitope_Rep2 1297.52448023585 1297.5233899358602 26.584 2 0.2109371939218876 0.00039635354736424893 0.0007423553919902985 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 78027 5124 NVSDAVAQSTR True NCI_RA007_Epitope_Rep1 1146.5629143499002 1146.56180993586 24.014 2 0.21093414728549081 0.00039635354736424893 0.0007424074399438678 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 88922 20564 QVFPGLLERV True PC9_epitope_Rep3 1156.6604435631998 1156.65934993586 84.365 2 0.21093093714984984 0.00039635354736424893 0.0007424622850376379 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 43978 16673 IIEPSLRQLAQ True PC9_epitope_Rep2 1266.72958575218 1266.7284899358601 69.375 2 0.21093015890458117 0.00039635354736424893 0.0007424755819523789 ['ENSG00000221983|ENST00000442744|UBA52'] 78386 20668 NYLDQIAKF True PC9_epitope_Rep5 1110.5709598524597 1110.5698699358602 84.554 2 0.21092095732029575 0.00039635354736424893 0.0007426328161601768 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'KDM5C|p.Y601Lfs*21|1|0.69|ENSG00000126012|chrX:53201918-53201919|-/A|frameshift_variant', 'KDM5C|p.T270Qfs*2|1|0.16|ENSG00000126012|chrX:53215951-53215951|G/-|frameshift_variant', 'KDM5C|p.E293Rfs*6|1|0.35|ENSG00000126012|chrX:53215881-53215881|C/-|frameshift_variant'] 115183 7800 TRDPQFQKL True PC9_epitope_Rep5 1131.6036569630699 1131.6020249037902 34.946 3 0.21091700979625308 0.00039635354736424893 0.000742700280633255 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 43807 11059 IHSENFQTL True PC9_epitope_Rep2 1087.5298233164701 1087.5287299358602 47.856 2 0.21091445340499287 0.00039635354736424893 0.0007427439734737614 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 108527 15088 SYM[Oxidation]LVNENRF True PC9_epitope_Rep1 1287.59177233047 1287.5906699358602 62.854 2 0.210910621091155 0.00039635354736424893 0.0007428094787151996 ['ENSG00000182195|ENST00000370526|LDOC1'] 103365 4479 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 22.346 2 0.21090894674408556 0.00039635354736424893 0.0007428380999309526 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 69643 6986 LVDQRVAEY True H1975_Epitope_Rep2 1091.56112344475 1091.56002993586 31.795 2 0.21090360581431777 0.00039635354736424893 0.0007429294049452225 ['ENSG00000143157|ENST00000367876|POGK'] 90404 4061 REIEEGQPEA True H1975_Epitope_Rep2 1156.53603089572 1156.5349299358602 20.707 2 0.21090015534178014 0.00039635354736424893 0.0007429883979355824 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 134317 14771 VYNSEYYHF True PC9_epitope_Rep4 1220.5138388991602 1220.51274993586 64.749 2 0.210899981546863 0.00039635354736424893 0.0007429913694447629 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 98616 13440 SFVNDIFER True H1975_Epitope_Rep1 1125.5454733806098 1125.54436993586 56.811 2 0.21089809277634894 0.00039635354736424893 0.0007430236640172935 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 96107 12849 RYMPQNPHII True PC9_epitope_Rep3 1267.6495616096697 1267.64791490379 54.443 3 0.2108959372024889 0.00039635354736424893 0.0007430605221670515 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 118386 18211 TYNYPVHYF True PC9_epitope_Rep5 1202.53965972418 1202.53856993586 75.06 2 0.21089497595032813 0.00039635354736424893 0.0007430769592057136 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 20837 12931 EQISDIDDAVR True PC9_epitope_Rep5 1259.59935942827 1259.5982699358601 54.751 2 0.21088118176176993 0.00039635354736424893 0.0007433128746549847 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 29767 18766 FVNVVPTFGK True PC9_epitope_Rep5 1106.6124307416198 1106.61132993586 77.194 2 0.21088113432357147 0.00039635354736424893 0.0007433136860975827 ['ENSG00000149806|ENST00000529639|FAU'] 113913 6024 TNRPPLSLSR True PC9_epitope_Rep4 1139.64110510095 1139.63944490379 30.151 3 0.21087632899687092 0.00039635354736424893 0.0007433958870527112 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 90515 5248 RELQSQIQEA True NCI_RA007_Epitope_Rep3 1200.60986454232 1200.6087699358602 27.646 2 0.21087126067140216 0.00039635354736424893 0.0007434825968040092 ['ENSG00000179085|ENST00000368400|DPM3', 'nc|ENSG00000179085|Q9P2X0-2|DPM3'] 12418 11378 DITSDTSGDFR True PC9_epitope_Rep2 1212.5258601348398 1212.5247699358601 49.086 2 0.21086871025594744 0.00039635354736424893 0.0007435262335714972 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 103156 11506 SPIENIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 49.254 2 0.21086647734885253 0.00039635354736424893 0.0007435644399852384 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 68180 7686 LTDRGVMSY True H1975_Epitope_Rep2 1040.49608066004 1040.49498993586 34.516 2 0.21086622942923597 0.00039635354736424893 0.0007435686821638456 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 95904 18107 RYLDWIKKI True PC9_epitope_Rep2 1233.7233781729299 1233.7217249037901 74.951 3 0.2108586976523374 0.00039635354736424893 0.0007436975707644116 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 31789 6035 GEIESKFNQA True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 28.191 2 0.21084502146102388 0.00039635354736424893 0.0007439316638323779 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 27849 14538 FQDKDQVFI True PC9_epitope_Rep4 1138.56587447202 1138.56476993586 63.835 2 0.21083802275049285 0.00039635354736424893 0.0007440514881783495 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 141844 5697 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 28.528 2 0.2108274042976074 0.00039635354736424893 0.0007442333228105872 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 38712 18550 HGFAGYFETV True PC9_epitope_Rep4 1126.5083595959 1126.5072699358602 79.427 2 0.2108202327913189 0.00039635354736424893 0.0007443561557738552 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 13249 13560 DLSSVQTLLTK True H1975_Epitope_Rep1 1203.6710678165498 1203.66996993586 57.283 2 0.21081715968173623 0.00039635354736424893 0.0007444087979643208 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 65908 5025 LSDPSGPKSY True H1975_Epitope_Rep2 1049.50293986229 1049.50184993586 24.409 2 0.21081623751436349 0.00039635354736424893 0.0007444245953669612 ['nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 54698 22799 KYLVIGDLLF True PC9_epitope_Rep3 1179.69034670915 1179.68924993586 92.967 2 0.2108131227562515 0.00039635354736424893 0.0007444779559417991 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 35663 8641 GTDWGEKGYY True H1975_Epitope_Rep1 1174.4931034545798 1174.49200993586 38.166 2 0.21081229228682916 0.00039635354736424893 0.0007444921838023264 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000527141.5_1_11:66331406-66331633:-|nuORF'] 85936 18693 QHIDFVTAI True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 77.27 2 0.21080789175192546 0.00039635354736424893 0.0007445675796881455 ['IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 61918 14208 LLDEVFFSEK True H1975_Epitope_Rep1 1225.6230549949698 1225.6219499358601 59.829 2 0.21080669636259453 0.00039635354736424893 0.0007445880620298802 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF', 'ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4'] 17528 16372 EHGDQDYIW True PC9_epitope_Rep5 1161.47270236317 1161.4716099358602 67.971 2 0.21080501551989184 0.00039635354736424893 0.0007446168633056241 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 24444 10569 FADLSEAANR True PC9_epitope_Rep3 1092.5199869087598 1092.5188899358602 45.599 2 0.21079118693840934 0.00039635354736424893 0.0007448538587739697 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 22291 7676 ETDHINQIGY True H1975_Epitope_Rep1 1188.54111627616 1188.54000993586 34.493 2 0.21078905144759158 0.00039635354736424893 0.0007448904637519181 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 29313 14364 FVDDYTVRV True PC9_epitope_Rep6 1112.55022440788 1112.54912993586 67.147 2 0.2107859587398021 0.00039635354736424893 0.000744943479823072 ['ENSG00000115233|ENST00000409682|PSMD14'] 138270 10279 YHADIYDKV True PC9_epitope_Rep3 1122.53457434374 1122.5329349037902 44.486 3 0.21078576853071535 0.00039635354736424893 0.0007449467405645749 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 68162 8363 LTDRELEEY True H1975_Epitope_Rep3 1166.54553295026 1166.54442993586 37.151 2 0.21077854523408346 0.00039635354736424893 0.0007450705796477379 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 47390 15377 IVIRGLNTI True PC9_epitope_Rep6 997.62841515893 997.62730993586 71.294 2 0.2107646877045494 0.00039635354736424893 0.0007453082164933551 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 1332 7361 AEDVLSGKVSA True H1975_Epitope_Rep2 1074.55570371114 1074.55460993586 33.254 2 0.21075060746915297 0.00039635354736424893 0.000745549750310495 ['ENSG00000175390|ENST00000651655|EIF3F'] 96121 10679 RYNPENNTW True PC9_epitope_Rep1 1192.52613491836 1192.5250299358602 45.967 2 0.2107501292703291 0.00039635354736424893 0.0007455579547613602 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ENST00000494880.5_1_1:185268818-185270317:-|nuORF'] 90274 8823 REEGPYEVEV True H1975_Epitope_Rep2 1205.55643198713 1205.55532993586 38.904 2 0.2107441391759091 0.00039635354736424893 0.0007456607344059191 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 70308 11838 LVSESSDILPK True PC9_epitope_Rep2 1186.6445187155398 1186.64342993586 50.864 2 0.21073352626907554 0.00039635354736424893 0.000745842868409211 ['CON__H-INV:HIT000292931'] 8114 8912 ATEDPWKTNY True H1975_Epitope_Rep2 1223.54586730343 1223.5447699358601 39.247 2 0.21073255972581229 0.00039635354736424893 0.0007458594580136681 ['ENSG00000139684|ENST00000378720|ESD'] 84220 20492 PYLFHVVTF True PC9_epitope_Rep4 1121.59096702105 1121.5898699358602 86.971 2 0.2107309938537106 0.00039635354736424893 0.0007458863351946543 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 140353 13156 YRDPTTVTTL True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 55.469 2 0.210729501934359 0.00039635354736424893 0.0007459119439284935 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 21972 11074 ESENVVCHFY True H1975_Epitope_Rep2 1225.50737361973 1225.50626993586 47.628 2 0.21072001101487647 0.00039635354736424893 0.0007460748758241954 ['ENST00000463385.5_1_2:99938416-99949470:-|nuORF', 'nc|ENSG00000115514|O14530-2|TXNDC9', 'ENSG00000115514|ENST00000264255|TXNDC9'] 98047 8961 SEQLDQPISA True H1975_Epitope_Rep3 1086.51931820242 1086.5187749679299 39.464 1 0.2107174629660892 0.00039635354736424893 0.000746118624601132 ['KDM5A-RAE1|1|fusion', 'ENST00000462438.1_1_20:55948707-55953152:+|nuORF', 'ENSG00000101146|ENST00000395841|RAE1'] 23822 19294 EYIKFLRSI True PC9_epitope_Rep1 1167.6651945904698 1167.6640899358601 79.019 2 0.21070991616101925 0.00039635354736424893 0.0007462482147294023 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 131841 7963 VTQSNFAVGYK True NCI_RA007_Epitope_Rep1 1212.6138872935996 1212.61278993586 34.967 2 0.21070817165658823 0.00039635354736424893 0.0007462781737384933 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000603132.1_1_12:55196819-55197167:-|nuORF'] 35617 9836 GTDDGRLLEY True H1975_Epitope_Rep2 1137.5302172392899 1137.52912993586 42.82 2 0.21070386698588395 0.00039635354736424893 0.0007463521045766373 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 1024 8038 AEAEFYRQV True H1975_Epitope_Rep2 1111.5298233164701 1111.5287299358602 35.868 2 0.2107007973401535 0.00039635354736424893 0.0007464048288886807 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 133742 20688 VYDVVELKF True PC9_epitope_Rep1 1110.5961119711399 1110.5950099358602 84.4 2 0.21068739776023568 0.00039635354736424893 0.0007466350241703086 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 42435 4914 IEDSPTKRLP True H1975_Epitope_Rep3 1154.62953735774 1154.62789490379 24.029 3 0.2106843655038155 0.00039635354736424893 0.0007466871260673776 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF'] 102026 5960 SLQSVAEER True NCI_RA007_Epitope_Rep2 1017.5090878718898 1017.50798993586 27.792 2 0.21068268465144252 0.00039635354736424893 0.0007467160089684473 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 58169 17391 LEKSFYQF True PC9_epitope_Rep5 1060.5229470308798 1060.52184993586 71.896 2 0.2106785643132378 0.00039635354736424893 0.0007467868154786617 ['ENSG00000039123|ENST00000230640|MTREX'] 11741 10757 DHASIQMNV True PC9_epitope_Rep4 1013.46002950449 1013.4589299358599 49.134 2 0.2106762226097444 0.00039635354736424893 0.0007468270598016371 ['ENSG00000171858|ENST00000343986|RPS21'] 42043 15326 IDIIPNPQER True PC9_epitope_Rep1 1193.64043639461 1193.6393299358601 63.772 2 0.21066309743253878 0.00039635354736424893 0.0007470526682928484 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 98028 10370 SEQGINEFLR True H1975_Epitope_Rep1 1191.58840082175 1191.58730993586 44.837 2 0.21065325656698478 0.00039635354736424893 0.0007472218676473553 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 8254 12595 ATGSWDSFLK True NCI_RA007_Epitope_Rep4 1110.53457434374 1110.53346993586 55.467 2 0.21065200026627137 0.00039635354736424893 0.0007472434706761093 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 28368 11626 FRVKYETEL True PC9_epitope_Rep4 1183.62372370131 1183.62262993586 52.477 2 0.21064884843278023 0.00039635354736424893 0.0007472976715642829 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 35529 3928 GSSDVIIHR True NCI_RA007_Epitope_Rep5 982.5195929859399 982.51848993586 21.426 2 0.21064844787003015 0.00039635354736424893 0.0007473045601728421 ['PHRF1|p.S867Pfs*46|1|0.14|ENSG00000070047|chr11:608054-608064|CAGCCCGAAGG/-|frameshift_variant', 'ENST00000532550.1_1_11:601671-606691:+|nuORF', 'nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 137177 13031 YAYDGKDYL True PC9_epitope_Rep4 1106.4920408254197 1106.49094993586 58.017 2 0.21062855045469947 0.00039635354736424893 0.0007476468227203451 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 14769 6821 DVNQQEFVR True NCI_RA007_Epitope_Rep5 1133.5465360097699 1133.54542993586 32.923 2 0.21062272275003097 0.00039635354736424893 0.0007477470969226422 ['ENSG00000105372|ENST00000598742|RPS19'] 89671 8943 QYVTQINRL True NCI_RA007_Epitope_Rep4 1133.61930702721 1133.61820993586 41.233 2 0.21061185688909884 0.00039635354736424893 0.0007479340960225973 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 100770 11370 SLEDQVEM[Oxidation]LR True NCI_RA007_Epitope_Rep1 1234.58635259686 1234.58524993586 48.201 2 0.2106101137247106 0.00039635354736424893 0.000747964099868915 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 31792 6107 GEIESKFNQA True H1975_Epitope_Rep3 1121.53530261973 1121.5342099358602 28.502 2 0.21060473821105902 0.00039635354736424893 0.0007480566323582372 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 90390 10474 REIDDYIVQA True H1975_Epitope_Rep1 1220.6037165327198 1220.60260993586 45.243 2 0.21060261853113751 0.00039635354736424893 0.0007480931230535838 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 24154 15646 EYQDLLNVK True PC9_epitope_Rep5 1120.5764391557198 1120.57534993586 65.194 2 0.21058970387781367 0.00039635354736424893 0.0007483154898713739 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 132259 12920 VTVSDLQHV True PC9_epitope_Rep2 996.5240096600402 996.52290993586 54.992 2 0.2105778044758165 0.00039635354736424893 0.000748520434607697 ['ENSG00000068489|ENST00000262293|PRR11'] 30132 19948 FYNLLTRTF True PC9_epitope_Rep4 1173.61824439805 1173.6171499358602 84.865 2 0.21057055033025346 0.00039635354736424893 0.0007486454011986327 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 41053 2789 HTLNQIDSVK True NCI_RA007_Epitope_Rep1 1153.6091362663299 1153.60802993586 14.729 2 0.21056431707497525 0.00039635354736424893 0.0007487527977135019 ['CON__P12763'] 76493 20080 NQIEDNDDFQL True PC9_epitope_Rep5 1349.57353860325 1349.57244993586 82.287 2 0.21056101887041517 0.00039635354736424893 0.0007488096307221943 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 95655 13746 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.58635490379 57.718 3 0.210558262463913 0.00039635354736424893 0.0007488571310580372 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 133934 6784 VYIKHPVSL True NCI_RA007_Epitope_Rep5 1054.61751612206 1054.61640993586 32.781 2 0.21055360777215554 0.00039635354736424893 0.0007489373508435219 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 31758 6597 GEHSYTGIIHA True H1975_Epitope_Rep2 1183.56218607391 1183.56055490379 30.286 3 0.21054569551504984 0.00039635354736424893 0.0007490737318732164 ['ENSG00000122912|ENST00000609923|SLC25A16'] 66104 9983 LSELEAALQR True H1975_Epitope_Rep1 1128.6138872935999 1128.61278993586 43.334 2 0.21053844544673875 0.00039635354736424893 0.0007491987208429259 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 29083 18751 FTIFRTISV True PC9_epitope_Rep6 1082.6124307416198 1082.61132993586 84.766 2 0.21052821663178 0.00039635354736424893 0.0007493750980827559 ['ENSG00000105447|ENST00000253237|GRWD1'] 97179 10160 SDVEAIFSK True NCI_RA007_Epitope_Rep2 994.49712620586 994.4965749679301 44.108 1 0.2105261602900051 0.00039635354736424893 0.0007494105609713933 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 35406 10477 GSDFYSMHY True H1975_Epitope_Rep3 1105.41749598617 1105.41638993586 45.362 2 0.21051886084442178 0.00039635354736424893 0.0007495364580320098 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 97437 8376 SEEEISFRA True H1975_Epitope_Rep2 1066.49310345458 1066.49200993586 37.171 2 0.2105148371604686 0.00039635354736424893 0.000749605865522773 ['ENSG00000162928|ENST00000295030|PEX13'] 140364 12379 YRDPYTEQTI True PC9_epitope_Rep2 1284.59863115228 1284.5975299358602 52.926 2 0.21049757607788638 0.00039635354736424893 0.000749903687831816 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 54929 17085 KYPSPFFVF True NCI_RA007_Epitope_Rep5 1130.5800679841798 1130.5789699358602 72.485 2 0.210486712403833 0.00039635354736424893 0.0007500911902718387 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 97271 11487 SEAFSINFR True H1975_Epitope_Rep1 1069.51925863277 1069.5181699358602 49.168 2 0.21048534390132836 0.00039635354736424893 0.0007501148133843265 ['CON__P34955'] 90273 8594 REEGPYEVEV True H1975_Epitope_Rep1 1205.55643198713 1205.55532993586 37.985 2 0.21048378269982226 0.00039635354736424893 0.0007501417637815664 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 137848 11685 YESEWTNEV True H1975_Epitope_Rep2 1155.47203365683 1155.47147496793 50.019 1 0.21047615027830166 0.00039635354736424893 0.0007502735332060982 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 32145 8888 GEVFKTYNV True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 39.158 2 0.21047151720438154 0.00039635354736424893 0.0007503535319234019 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 95900 21838 RYLDLFTSF True PC9_epitope_Rep2 1160.5866099165999 1160.58550993586 89.475 2 0.21046672368208855 0.00039635354736424893 0.0007504363100904617 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 24221 4904 EYSKQMQRF True NCI_RA007_Epitope_Rep5 1215.57064258263 1215.56899490379 25.556 3 0.21046019430911023 0.00039635354736424893 0.0007505490789787467 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 29731 20954 FVNDIFERI True PC9_epitope_Rep1 1151.59750895347 1151.59640993586 85.423 2 0.2104488590296513 0.00039635354736424893 0.0007507448911206236 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 108428 21919 SYLPFTEAF True PC9_epitope_Rep4 1073.5069626135698 1073.5058699358601 92.52 2 0.21044856958505825 0.00039635354736424893 0.0007507498918241376 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 138311 12875 YHDIAQQAF True PC9_epitope_Rep5 1091.50360856863 1091.5025099358602 54.533 2 0.21044697187339137 0.00039635354736424893 0.000750777495920392 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 24238 7105 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56899490379 32.297 3 0.2104461142776187 0.00039635354736424893 0.0007507923132543001 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 131024 4742 VTDRDIDRY True H1975_Epitope_Rep3 1151.55710069347 1151.5560099358602 23.366 2 0.21044586634566806 0.00039635354736424893 0.0007507965970177016 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 76575 17074 NQLEAEIHL True PC9_epitope_Rep2 1065.54547338061 1065.54436993586 70.927 2 0.21044572986246898 0.00039635354736424893 0.0007507989551822127 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 95850 18525 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.62577490379 76.045 3 0.21043732952838234 0.00039635354736424893 0.0007509441109390161 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 139605 19467 YLYDLNHTL True PC9_epitope_Rep5 1150.5658744720201 1150.56476993586 79.932 2 0.2104271933704774 0.00039635354736424893 0.0007511192987984029 ['ENSG00000110057|ENST00000227471|UNC93B1'] 142913 15031 YYVNGTYRL True PC9_epitope_Rep1 1147.56620882519 1147.5651099358602 62.636 2 0.21042386383263684 0.00039635354736424893 0.0007511768536717699 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'ENST00000518062.1_1_5:158588183-158590023:-|nuORF'] 137137 16714 YAVDAYFREA True PC9_epitope_Rep4 1203.55603806431 1203.5549499358601 72.26 2 0.21041686065961981 0.00039635354736424893 0.0007512979259757038 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 88239 5038 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 24.46 2 0.21040739635073355 0.00039635354736424893 0.0007514615780131917 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 83317 13666 PTDYADIM[Oxidation]MGY True H1975_Epitope_Rep2 1291.51007642211 1291.50896993586 57.705 2 0.21040615395769724 0.00039635354736424893 0.0007514830634999097 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 36639 19776 GVIDLIFEKA True PC9_epitope_Rep6 1103.62266107215 1103.6215699358602 88.726 2 0.21040581039352202 0.00039635354736424893 0.0007514890050807563 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 48449 19379 IYYVDVQKF True PC9_epitope_Rep3 1173.6070110080097 1173.6059099358602 79.765 2 0.2103916043498313 0.00039635354736424893 0.0007517347249249661 ['ENSG00000160410|ENST00000291842|SHKBP1'] 92876 10400 RPFQGTMGV True PC9_epitope_Rep4 991.4909357099498 991.48982993586 47.706 2 0.2103838515696662 0.00039635354736424893 0.0007518688576178691 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 116262 11930 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 50.892 2 0.21038319847331408 0.00039635354736424893 0.0007518801580896355 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 24582 21371 FAIDEVLEKV True PC9_epitope_Rep3 1161.62814037541 1161.6270499358602 87.502 2 0.21037622761421698 0.00039635354736424893 0.0007520007848999288 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF', 'DDX60L|p.V1147I|1|0.13|ENSG00000181381|chr4:168400878-168400878|C/T|missense_variant'] 92588 6095 RMQKEITAL True NCI_RA007_Epitope_Rep4 1088.60121443492 1088.60010993586 30.059 2 0.21036795897056437 0.00039635354736424893 0.0007521438943190424 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 137744 8222 YENEVALRQ True PC9_epitope_Rep1 1120.5512870370399 1120.55018993586 36.458 2 0.21035772762308969 0.00039635354736424893 0.000752321011025342 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 48926 6765 KEEDYIRYA True H1975_Epitope_Rep2 1185.56660274801 1185.56494490379 30.937 3 0.21034367085939418 0.00039635354736424893 0.0007525644184416525 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF'] 115778 13051 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45454993586 55.44 2 0.21032765612510373 0.00039635354736424893 0.0007528418264306031 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 121463 5653 VEYETYKEA True H1975_Epitope_Rep2 1130.5131701928199 1130.5120699358602 26.741 2 0.21032506763986608 0.00039635354736424893 0.0007528866739249708 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 77342 11195 NSDVVEQIY True H1975_Epitope_Rep3 1065.49785448185 1065.4967499358602 48.159 2 0.2103172807806377 0.00039635354736424893 0.000753021603400554 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 92861 11881 RPFEDQTSL True PC9_epitope_Rep5 1091.52473793603 1091.52364993586 50.699 2 0.2103018096768094 0.00039635354736424893 0.0007532897562494847 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 109133 13584 TALVELVK True PC9_epitope_Rep2 871.5378688190299 871.53676993586 57.542 2 0.21028968769882753 0.00039635354736424893 0.0007534999273231662 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 107195 4012 SVINKVTEK True NCI_RA007_Epitope_Rep4 1016.5866099166 1016.58550993586 21.688 2 0.21028529744442384 0.00039635354736424893 0.0007535760601441765 ['ENSG00000124784|ENST00000379834|RIOK1', 'RIOK1|p.D129Y|1|0.07|ENSG00000124784|chr6:7396720-7396720|G/T|missense_variant'] 111153 16542 THFQLAYRL True PC9_epitope_Rep5 1147.6138277239497 1147.61218490379 68.63 3 0.21028332412482043 0.00039635354736424893 0.0007536102826313341 ['ENSG00000106144|ENST00000310447|CASP2', 'nc|ENSG00000106144|P42575-2|CASP2', 'ENST00000493642.5_1_7:142986735-143000877:+|nuORF'] 73496 12120 MVDPLLTKY True H1975_Epitope_Rep2 1078.57326835158 1078.57216993586 51.703 2 0.21027926576861933 0.00039635354736424893 0.0007536806699694065 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 54349 20000 KYEELFPAF True PC9_epitope_Rep4 1142.5648118428596 1142.56370993586 85.063 2 0.2102775460803542 0.00039635354736424893 0.0007537104978966334 ['ENSG00000105402|ENST00000263354|NAPA'] 76970 12759 NRESYEVSL True PC9_epitope_Rep3 1095.51965255559 1095.5185499358602 54.097 2 0.21026158218726532 0.00039635354736424893 0.0007539874475444379 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000502972.1_1_4:48859213-48862776:+|nuORF'] 26349 22107 FHSEIEDFLL True PC9_epitope_Rep1 1248.60265390356 1248.60154993586 89.846 2 0.21024339778432344 0.00039635354736424893 0.0007543030441015497 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 86069 21399 QHSIPVFIF True PC9_epitope_Rep5 1086.58621599378 1086.5851099358601 87.374 2 0.21023322922296359 0.00039635354736424893 0.000754479580747201 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 8643 11606 AVAEEVNAILK True NCI_RA007_Epitope_Rep2 1155.6499384491499 1155.6488499358602 49.736 2 0.2102262121627118 0.00039635354736424893 0.000754601428275101 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 134633 18993 VYSPLGSAYKL True PC9_epitope_Rep5 1196.6441247927198 1196.64302993586 78.083 2 0.21022177277953655 0.00039635354736424893 0.0007546785260040949 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000514806.5_1_5:54965038-54993786:-|nuORF'] 137657 11077 YEILTPNSIPK True H1975_Epitope_Rep1 1273.69180326113 1273.69070993586 47.571 2 0.21018501731000755 0.00039635354736424893 0.0007553171532947717 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 27826 16541 FQDENHLYL True PC9_epitope_Rep5 1177.54038800017 1177.53928993586 68.627 2 0.21017701608766115 0.00039635354736424893 0.0007554562465959855 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 25302 12605 FDQLLAEEK True PC9_epitope_Rep3 1091.5498900547097 1091.5487899358602 53.507 2 0.2101572202953449 0.00039635354736424893 0.0007558004872269258 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 24157 6090 EYQELM[Oxidation]NVK True H1975_Epitope_Rep3 1168.5434251557197 1168.5423299358602 28.437 2 0.2101530098365901 0.00039635354736424893 0.0007558737256543376 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 38276 7760 HEEMNYITA True H1975_Epitope_Rep3 1106.47025983502 1106.46916993586 34.833 2 0.21015077436396684 0.00039635354736424893 0.0007559126132655016 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 18850 9171 ELDPSNTKALY True H1975_Epitope_Rep3 1249.61903224369 1249.61792993586 40.266 2 0.210149023484045 0.00039635354736424893 0.0007559430724490645 ['ENSG00000171497|ENST00000307720|PPID'] 85842 6261 QHEGGVQEL True PC9_epitope_Rep5 995.46722305991 995.46612993586 29.06 2 0.21014039213933808 0.00039635354736424893 0.0007560932456401771 ['ENSG00000090273|ENST00000321265|NUDC'] 134076 10095 VYKPAQNSW True PC9_epitope_Rep3 1091.5399940773498 1091.5388899358602 43.784 2 0.21013950207015866 0.00039635354736424893 0.0007561087332873554 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 23255 8461 EVPAVPETLK True H1975_Epitope_Rep1 1081.60192562757 1081.60082993586 37.474 2 0.21013800668481636 0.00039635354736424893 0.0007561347544539163 ['ENSG00000147604|ENST00000352983|RPL7'] 142692 10790 YYPTEDVPR True PC9_epitope_Rep1 1138.5294889632999 1138.52838993586 46.392 2 0.21013686605858128 0.00039635354736424893 0.0007561546030692581 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 4615 8709 ALAAAGYDVEK True PC9_epitope_Rep4 1106.56078909158 1106.5596899358602 40.996 2 0.21011990207715497 0.00039635354736424893 0.0007564498636152165 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 14009 20465 DRFEFPEQL True PC9_epitope_Rep5 1179.5560380643099 1179.5549499358601 83.755 2 0.21011071069268264 0.00039635354736424893 0.0007566098892993273 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 52470 5498 KKVAAIEAL True NCI_RA007_Epitope_Rep5 941.5909670210499 941.58986993586 27.836 2 0.210108676333486 0.00039635354736424893 0.000756645312897786 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4'] 118273 20016 TYLPAPEGLKF True PC9_epitope_Rep2 1234.65977485686 1234.6586699358602 82.395 2 0.2100894877957117 0.00039635354736424893 0.0007569795181932518 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 40825 9567 HSDPSILGY True H1975_Epitope_Rep1 987.46616043075 987.46506993586 41.722 2 0.21008404749509255 0.00039635354736424893 0.000757074298436524 ['ENSG00000146830|ENST00000678049|GIGYF1'] 118754 19385 TYYRGFLTL True PC9_epitope_Rep4 1132.59169529704 1132.5905899358602 82.675 2 0.21007345357298882 0.00039635354736424893 0.0007572588986016826 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 131135 7297 VTEGSFVYK True NCI_RA007_Epitope_Rep5 1028.5178616504397 1028.51676993586 34.745 2 0.21007281373655978 0.00039635354736424893 0.000757270049262178 ['ENSG00000057608|ENST00000380191|GDI2'] 142604 15437 YYLTPDGQRF True PC9_epitope_Rep4 1258.59823722946 1258.5971499358602 67.312 2 0.21006929662810767 0.00039635354736424893 0.000757331346122703 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 53251 6237 KQFQSPSTL True NCI_RA007_Epitope_Rep3 1034.5396597241797 1034.53856993586 31.538 2 0.21005112166427053 0.00039635354736424893 0.0007576481823144143 ['ENSG00000177311|ENST00000321464|ZBTB38'] 106713 5768 STVGAGAYAYK True NCI_RA007_Epitope_Rep4 1086.53457434374 1086.53346993586 28.806 2 0.21004188367020127 0.00039635354736424893 0.0007578092751932529 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 107013 22090 SVFGFSFKL True PC9_epitope_Rep5 1030.5487678558998 1030.54766993586 90.0 2 0.210033907377323 0.00039635354736424893 0.000757948394069464 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000509410.1_1_5:33461160-33466106:+|nuORF'] 129078 16010 VQPRNWLLF True NCI_RA007_Epitope_Rep5 1171.6502132326698 1171.64910993586 68.309 2 0.21002886344571275 0.00039635354736424893 0.0007580363812569121 ['ENSG00000060762|ENST00000360961|MPC1'] 139950 7522 YQAVTATLEEK True NCI_RA007_Epitope_Rep5 1251.63468230783 1251.63358993586 35.617 2 0.21001909357506976 0.00039635354736424893 0.0007582068376641478 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 108339 20701 SYLDNFIKI True PC9_epitope_Rep4 1111.59136094387 1111.59026993586 87.787 2 0.21000259957215087 0.00039635354736424893 0.0007584946982876773 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 81386 15880 PLDQTPLFY True H1975_Epitope_Rep3 1092.54916177872 1092.5480699358602 66.531 2 0.2100000363552329 0.00039635354736424893 0.0007585394425237797 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000514312.1_1_5:10415712-10417549:+|nuORF', 'ENST00000505253.1_1_5:10413496-10422048:+|nuORF'] 134843 17629 VYVDLGGSHVF True PC9_epitope_Rep6 1191.5924235730301 1191.5913299358601 80.451 2 0.20999905237286445 0.00039635354736424893 0.0007585566199003996 ['ENSG00000165733|ENST00000374518|BMS1'] 47719 19857 IYDKFIAQL True PC9_epitope_Rep2 1109.6120963884498 1109.61098993586 81.771 2 0.2099986469558824 0.00039635354736424893 0.0007585636973766949 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 41060 6326 HTLNQIDSVK True PC9_epitope_Rep1 1153.6091362663299 1153.60802993586 29.145 2 0.2099954162855728 0.00039635354736424893 0.0007586200984485542 ['CON__P12763'] 63991 3612 LNVTEQEKIDK True NCI_RA007_Epitope_Rep1 1315.69834519355 1315.69669490379 17.993 3 0.20999519503421446 0.00039635354736424893 0.0007586239612107204 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 142410 18811 YYEYNHDLF True PC9_epitope_Rep5 1262.5244035828598 1262.5233099358602 77.369 2 0.20998944987041657 0.00039635354736424893 0.0007587242712388238 ['ENSG00000151748|ENST00000324679|SAV1'] 23753 19861 EYGKFFVTL True PC9_epitope_Rep4 1102.5698972233 1102.5688099358601 84.525 2 0.20997438182197878 0.00039635354736424893 0.0007589874211909093 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 10150 5962 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep5 1119.5171508382302 1119.51604993586 29.616 2 0.20997280849727104 0.00039635354736424893 0.0007590149031748486 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 53823 14781 KTETEPVFWYY True H1975_Epitope_Rep1 1461.6816325002499 1461.68052993586 62.08 2 0.20996823067648238 0.00039635354736424893 0.0007590948717476174 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 134101 18364 VYKTIMEQF True PC9_epitope_Rep5 1157.57908200801 1157.5779899358602 75.656 2 0.20995329674610289 0.00039635354736424893 0.0007593558068498192 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 14777 8036 DVNQQEFVR True PC9_epitope_Rep6 1133.5465360097699 1133.54542993586 40.396 2 0.20995068219305407 0.00039635354736424893 0.0007594014992341294 ['ENSG00000105372|ENST00000598742|RPS19'] 88378 20118 QSLEYLEQV True PC9_epitope_Rep1 1107.54480467427 1107.54427496793 82.215 1 0.20994542664087898 0.00039635354736424893 0.00075949335452412 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 11593 8223 DGETLEELM[Oxidation]K True H1975_Epitope_Rep1 1179.5329200416697 1179.53182993586 36.573 2 0.20994468991279902 0.00039635354736424893 0.0007595062317729089 ['nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion'] 49856 9027 KIDENQLMY True H1975_Epitope_Rep1 1152.54851015572 1152.54740993586 39.629 2 0.20993890281918545 0.00039635354736424893 0.0007596073918331008 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN'] 68175 7058 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 32.075 2 0.20992788025445633 0.00039635354736424893 0.0007598001068276369 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 73241 8028 MSDVNLKY True H1975_Epitope_Rep3 968.4637179025999 968.46262993586 35.852 2 0.2099079358704771 0.00039635354736424893 0.0007601489327366637 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 119142 9843 VAIEHLDKI True PC9_epitope_Rep6 1036.59169529704 1036.5905899358602 48.334 2 0.20990766096359362 0.00039635354736424893 0.000760153741961597 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 17589 9488 EHINEGETAM[Oxidation]L True PC9_epitope_Rep1 1258.5499670881397 1258.54886993586 41.352 2 0.2099065848891686 0.00039635354736424893 0.000760172567116501 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 14351 5326 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 25.564 2 0.20990650583333742 0.00039635354736424893 0.0007601739501603491 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 111293 14600 THMELYSQL True PC9_epitope_Rep4 1120.52229540788 1120.52118993586 64.087 2 0.20990458510531512 0.00039635354736424893 0.0007602075531516028 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 108497 20282 SYMGHFDLL True PC9_epitope_Rep2 1081.49026700361 1081.4891699358602 83.436 2 0.209883917273161 0.00039635354736424893 0.0007605692296143805 ['ENSG00000169976|ENST00000367569|SF3B5'] 90366 8853 REGPYSISV True H1975_Epitope_Rep2 1006.5083595959 1006.50726993586 39.02 2 0.20988381445197443 0.00039635354736424893 0.0007605710293638902 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 141275 9661 YTDKVVIGM True H1975_Epitope_Rep3 1024.52631815916 1024.5252299358601 42.18 2 0.20988084566645437 0.00039635354736424893 0.0007606229958887786 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 47892 7750 IYIKHPHLF True NCI_RA007_Epitope_Rep3 1166.66004964038 1166.6584049037901 37.608 3 0.20987799885376213 0.00039635354736424893 0.0007606728307098229 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 35403 10322 GSDFYSMHY True H1975_Epitope_Rep1 1105.41749598617 1105.41638993586 44.651 2 0.20986531046664167 0.00039635354736424893 0.000760894986848896 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 142090 8534 YVNGLTLGGQK True NCI_RA007_Epitope_Rep1 1148.6189726740397 1148.6178699358602 37.196 2 0.2098589612557758 0.00039635354736424893 0.0007610061771984416 ['ENSG00000108518|ENST00000225655|PFN1'] 114635 8097 TQDTQPHYI True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 35.971 2 0.20984175580414696 0.00039635354736424893 0.0007613075690581359 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24492 7628 FAEHNDLQY True H1975_Epitope_Rep3 1135.4934378077498 1135.4923499358601 34.323 2 0.20984106874159816 0.00039635354736424893 0.0007613196069772514 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 132874 21553 VVLPLELKL True PC9_epitope_Rep1 1022.6739683690199 1022.6728699358599 87.725 2 0.20984011149438223 0.00039635354736424893 0.0007613363790794711 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 76377 14695 NQAKYIPEL True PC9_epitope_Rep2 1074.57095985246 1074.5698699358602 61.789 2 0.20983608654193997 0.00039635354736424893 0.0007614069050580564 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 90695 7189 REQLVDVQA True H1975_Epitope_Rep2 1056.55637241748 1056.55526993586 32.587 2 0.20983428200388168 0.00039635354736424893 0.0007614385266434674 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000488706.1_1_10:71007290-71008567:+|nuORF', 'nc|ENSG00000156510|Q2TB90-3|HKDC1'] 105488 19943 SRYLNEFEEL True PC9_epitope_Rep1 1298.61428121642 1298.6131899358602 81.532 2 0.20983424521959798 0.00039635354736424893 0.0007614391712417282 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 130511 4798 VSQEPFPNK True NCI_RA007_Epitope_Rep3 1044.5240096600398 1044.52290993586 25.839 2 0.2098309365083757 0.00039635354736424893 0.0007614971544796526 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 116355 11809 TTEVVNELY True H1975_Epitope_Rep2 1066.51825557326 1066.51767496793 50.499 1 0.20982915779894687 0.00039635354736424893 0.000761528327157609 ['ENSG00000113719|ENST00000393784|ERGIC1'] 24000 11436 EYMKHTRLF True PC9_epitope_Rep1 1223.6121134717898 1223.61046490379 48.866 3 0.2098284185669581 0.00039635354736424893 0.000761541282905293 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 88667 11882 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep2 1318.5751192068199 1318.5740299358602 50.784 2 0.20982723853948274 0.00039635354736424893 0.0007615619644737323 ['ENSG00000167325|ENST00000300738|RRM1'] 111436 18924 THSQFIVVSL True PC9_epitope_Rep4 1129.6131590176099 1129.61206993586 80.877 2 0.20982161029716478 0.00039635354736424893 0.0007616606147427157 ['ENSG00000136824|ENST00000374793|SMC2'] 29125 12811 FTLSHITQL True H1975_Epitope_Rep2 1058.5760452329 1058.57494993586 54.386 2 0.20980919624741018 0.00039635354736424893 0.0007618782500869615 ['ENSG00000148484|ENST00000345264|RSU1'] 139006 19103 YKVEYPIMY True PC9_epitope_Rep2 1204.58383303528 1204.58272993586 78.851 2 0.2098091760184264 0.00039635354736424893 0.0007618786047797431 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 130936 10965 VTDHLGVVYY True H1975_Epitope_Rep1 1164.58152453616 1164.5804299358601 47.141 2 0.20978974019940796 0.00039635354736424893 0.0007622194668519662 ['nc|ENSG00000148719|Q9NXW2-2|DNAJB12', 'ENSG00000148719|ENST00000444643|DNAJB12', 'ENST00000473051.1_1_10:74095570-74096546:-|nuORF'] 6760 14905 AQDEHLITF True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 69.323 2 0.2097861962796309 0.00039635354736424893 0.0007622816360012144 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 41209 14801 HVLDDFVKV True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 68.902 2 0.20977451010662657 0.00039635354736424893 0.0007624866765297997 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 48386 7652 IYTSSVNRL True NCI_RA007_Epitope_Rep1 1051.56620882519 1051.5651099358602 33.758 2 0.20976968022023615 0.00039635354736424893 0.0007625714357829174 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 118066 13114 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.54357496793 58.864 1 0.2097608098554756 0.00039635354736424893 0.0007627271256591635 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 86538 18448 QLDDLKVEL True PC9_epitope_Rep4 1071.58119018299 1071.58008993586 79.031 2 0.2097597890204194 0.00039635354736424893 0.000762745045083768 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 69508 15054 LVAVELEKV True PC9_epitope_Rep4 998.6011973515799 998.60010993586 65.837 2 0.20975849524434265 0.00039635354736424893 0.0007627677562379504 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 31620 2621 GEFEKKYVA True NCI_RA007_Epitope_Rep5 1069.5444107514497 1069.5433099358602 14.77 2 0.20975531688752605 0.00039635354736424893 0.0007628235525073546 ['ENSG00000132341|ENST00000543796|RAN'] 32639 7408 GGNFGFGDSR True NCI_RA007_Epitope_Rep4 1012.4362572847999 1012.43516993586 35.137 2 0.2097552455976499 0.00039635354736424893 0.0007628248040529141 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 96220 13632 RYPTSIASLAF True NCI_RA007_Epitope_Rep3 1224.65027280232 1224.64916993586 60.923 2 0.2097497563596696 0.00039635354736424893 0.0007629211777993156 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 42644 3627 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 18.971 2 0.20974402653534452 0.00039635354736424893 0.0007630217885148293 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 95940 10640 RYLEKPMEI True PC9_epitope_Rep4 1177.6165301458898 1177.6154299358602 48.676 2 0.20973469613609055 0.00039635354736424893 0.0007631856506712366 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 9199 12526 AVLYQPLFDK True NCI_RA007_Epitope_Rep4 1192.6492101731599 1192.64810993586 55.198 2 0.20972246831783029 0.00039635354736424893 0.000763400451275683 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 70970 18273 LYGRNFNYL True PC9_epitope_Rep1 1158.5821932425 1158.58108993586 75.076 2 0.20971723954845217 0.00039635354736424893 0.0007634923212364757 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 131169 12015 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60556993586 51.223 2 0.2097037912701673 0.00039635354736424893 0.0007637286596810799 ['ENSG00000168807|ENST00000336278|SNTB2'] 87217 14860 QPITPGPSI True PC9_epitope_Rep5 908.4967322830399 908.49562993586 62.162 2 0.20970335294735531 0.00039635354736424893 0.0007637363639490524 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 104989 14270 SRDKTIIMW True PC9_epitope_Rep2 1148.60121443492 1148.59957490379 60.156 3 0.2097014833233067 0.00039635354736424893 0.0007637692266430938 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 142238 19400 YWMHVQNTF True PC9_epitope_Rep5 1224.53861417836 1224.53750993586 79.668 2 0.20970120925166047 0.00039635354736424893 0.0007637740441653973 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 49927 19641 KILDLETQL True PC9_epitope_Rep5 1071.61757569171 1071.61646993586 80.604 2 0.2096932907937892 0.00039635354736424893 0.0007639132448307568 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 108359 18193 SYLEKQVVTF True PC9_epitope_Rep1 1212.6390394122798 1212.6379499358602 74.77 2 0.20968290263506856 0.00039635354736424893 0.00076409589961867 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 48039 23427 IYLPYLQNW True PC9_epitope_Rep1 1208.6229954253201 1208.62188993586 94.896 2 0.20967012147835368 0.00039635354736424893 0.0007643206905609468 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 52706 8783 KMDDLNLHY True H1975_Epitope_Rep3 1147.53319444475 1147.53208993586 38.789 2 0.20966705783693626 0.00039635354736424893 0.0007643745827741184 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 78677 12166 NYYEQWGK True PC9_epitope_Rep3 1086.47705946762 1086.4759699358601 51.834 2 0.20965854052110589 0.00039635354736424893 0.0007645244300672248 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 99434 19180 SIAGIFKEV True PC9_epitope_Rep2 962.54368247546 962.54258993586 79.149 2 0.20965744646566814 0.00039635354736424893 0.0007645436801972387 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 90568 8203 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 36.495 2 0.2096566205634855 0.00039635354736424893 0.0007645582124377821 ['ENSG00000026025|ENST00000544301|VIM'] 65851 15328 LSDLLDWKY True H1975_Epitope_Rep1 1151.58627556343 1151.5851699358602 64.227 2 0.20965403741195798 0.00039635354736424893 0.0007646036663154282 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 127355 9953 VMSQALKATF True NCI_RA007_Epitope_Rep4 1094.5794163611797 1094.57830993586 45.128 2 0.20964537138954226 0.00039635354736424893 0.0007647561759443215 ['ENSG00000157557|ENST00000360938|ETS2'] 106890 12820 SVDGVIKEV True PC9_epitope_Rep1 944.51786165044 944.51676993586 54.186 2 0.20962685784377488 0.00039635354736424893 0.0007650820901813066 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 142362 8068 YYEHVKARF True PC9_epitope_Rep5 1211.60874234351 1211.60764993586 35.971 2 0.20961953392543192 0.00039635354736424893 0.0007652110596051214 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 49445 6347 KEYDVAVQA True H1975_Epitope_Rep3 1021.5080252427298 1021.50692993586 29.405 2 0.20961387647874355 0.00039635354736424893 0.0007653106984812642 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 48287 10361 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65934993586 47.551 2 0.20960443379764254 0.00039635354736424893 0.0007654770318490287 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 78632 12969 NYTDIKDYL True NCI_RA007_Epitope_Rep3 1143.54480467427 1143.54370993586 58.287 2 0.2096033510416764 0.00039635354736424893 0.0007654961069749526 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 35612 7002 GTDDGKVGLY True H1975_Epitope_Rep2 1023.48728979815 1023.4861899358599 31.856 2 0.20959350921565106 0.00039635354736424893 0.0007656695142386202 ['ENSG00000082516|ENST00000285873|GEMIN5'] 77009 14014 NRHYYSITI True PC9_epitope_Rep1 1165.58800689893 1165.58635490379 58.743 3 0.20958343930741657 0.00039635354736424893 0.0007658469809679984 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 97901 5261 SEM[Oxidation]EVQDAELK True H1975_Epitope_Rep3 1293.5758474828096 1293.5747499358602 25.319 2 0.20956676489988837 0.00039635354736424893 0.0007661409326391239 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF', 'ENST00000418595.1_1_6:112937907-112938114:-|nuORF'] 41552 19817 HYSENMFSF True PC9_epitope_Rep5 1160.4596951513201 1160.4585899358601 81.275 2 0.2095623561526286 0.00039635354736424893 0.0007662186729774787 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 137886 11057 YEVKELYVP True NCI_RA007_Epitope_Rep3 1138.5910265906998 1138.58992993586 50.595 2 0.20955223961461786 0.00039635354736424893 0.000766397089868547 ['ENSG00000138801|ENST00000265174|PAPSS1'] 46676 9233 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 40.471 2 0.20954059089141103 0.00039635354736424893 0.0007666025802509316 ['ENSG00000170348|ENST00000303575|TMED10'] 48085 11976 IYNGDMEKI True PC9_epitope_Rep1 1081.51139637101 1081.51028993586 50.928 2 0.20954008896497664 0.00039635354736424893 0.000766611435772834 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 87864 17784 QRIDEFEAL True PC9_epitope_Rep1 1119.5560380643099 1119.5549499358601 73.203 2 0.20953422032937474 0.00039635354736424893 0.0007667149841214361 ['ENSG00000092820|ENST00000367075|EZR'] 31752 7877 GEHGLIIRV True NCI_RA007_Epitope_Rep5 992.57671393924 992.57560993586 36.993 2 0.2095287968480488 0.00039635354736424893 0.0007668106904811047 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 97547 10743 SEEQYNKIVIP True H1975_Epitope_Rep3 1318.6768814729799 1318.6757899358602 46.402 2 0.20952694400317687 0.00039635354736424893 0.0007668433897610417 ['ENSG00000039123|ENST00000230640|MTREX'] 39717 8254 HLVDEPQNLIK True H1975_Epitope_Rep1 1304.7088503076 1304.7077499358602 36.687 2 0.20952225818637904 0.00039635354736424893 0.0007669260919905209 ['CON__P02769'] 133752 18690 VYEEILHQI True PC9_epitope_Rep2 1142.5971746003 1142.5960699358602 77.258 2 0.20952034205234077 0.00039635354736424893 0.0007669599133373685 ['ENSG00000135842|ENST00000367511|NIBAN1'] 74973 19635 NHQDVAGVFAL True PC9_epitope_Rep1 1169.58292151849 1169.58182993586 80.351 2 0.2095195734815954 0.00039635354736424893 0.0007669734796656609 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 47154 10182 ITVTSEVPFSK True NCI_RA007_Epitope_Rep5 1206.6496040959798 1206.6485099358601 45.799 2 0.20951421090318972 0.00039635354736424893 0.0007670681432332654 ['ENSG00000116251|ENST00000234875|RPL22'] 139974 8647 YQDPDATSLKY True H1975_Epitope_Rep2 1299.59829679911 1299.5971899358601 38.219 2 0.2094942565491858 0.00039635354736424893 0.0007674204928638652 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 86178 10684 QIFNGTFVK True NCI_RA007_Epitope_Rep2 1052.5654805492 1052.5643899358602 46.16 2 0.20949075751670596 0.00039635354736424893 0.0007674822947467003 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 88293 12558 QSELVGQLY True H1975_Epitope_Rep3 1035.52367530687 1035.52317496793 53.504 1 0.20947974288569968 0.00039635354736424893 0.0007676768739646449 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 49872 20590 KIFDEILVNA True PC9_epitope_Rep1 1160.64412479272 1160.64302993586 84.014 2 0.2094635122846964 0.00039635354736424893 0.0007679636862192638 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 90848 8716 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 38.487 3 0.2094585477743496 0.00039635354736424893 0.0007680514359486682 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 31247 16986 GDEELDSLIK True PC9_epitope_Rep1 1117.5502839775297 1117.54918993586 70.159 2 0.20945581203353647 0.00039635354736424893 0.000768099795573379 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 97379 6878 SEDPTDDSRLP True H1975_Epitope_Rep2 1230.53642481854 1230.53532993586 31.376 2 0.20945217118455275 0.00039635354736424893 0.0007681641595114628 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 74307 12020 NELESYAYSLK True NCI_RA007_Epitope_Rep1 1315.62959692739 1315.6284899358602 50.742 2 0.20941346473051495 0.00039635354736424893 0.0007688487575671122 ['ENSG00000044574|ENST00000324460|HSPA5'] 78184 15426 NYAWVYYHL True NCI_RA007_Epitope_Rep2 1227.57129420563 1227.57018993586 64.705 2 0.20939801637124214 0.00039635354736424893 0.0007691221623707453 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant', 'ENSG00000119917|ENST00000371818|IFIT3'] 46722 6957 ITEDKTELY True H1975_Epitope_Rep3 1110.5444703210999 1110.54336993586 31.722 2 0.20938958715131523 0.00039635354736424893 0.0007692713836912708 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 141347 5211 YTDVSTRY True H1975_Epitope_Rep1 1003.46107505031 1003.45996993586 25.107 2 0.20938437717945407 0.00039635354736424893 0.0007693636296298948 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 68327 16125 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.5222499358601 67.238 2 0.20938338455166683 0.00039635354736424893 0.0007693812060086635 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 23680 19678 EYDLIVHQL True PC9_epitope_Rep5 1128.58152453616 1128.5804299358601 80.745 2 0.20938330298670843 0.00039635354736424893 0.0007693826502905985 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 136039 16275 WRDPDEPVL True PC9_epitope_Rep5 1125.5454733806098 1125.54436993586 67.595 2 0.20937777680456943 0.00039635354736424893 0.0007694805094928509 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 140707 7202 YSADREDLY True H1975_Epitope_Rep3 1130.48801807414 1130.4869299358602 32.677 2 0.20937580433948752 0.00039635354736424893 0.0007695154414883968 ['ENSG00000174231|ENST00000304992|PRPF8'] 52862 22303 KPFDLVIPFA True PC9_epitope_Rep1 1145.64848189717 1145.64738993586 90.6 2 0.20937140613569444 0.00039635354736424893 0.0007695933386014098 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 134906 10744 VYVVGTAHF True NCI_RA007_Epitope_Rep1 991.5127167003499 991.51160993586 45.785 2 0.20936687404507984 0.00039635354736424893 0.0007696736152757171 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 14326 4471 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.498 2 0.20935805013511247 0.00039635354736424893 0.0007698299368139623 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 71366 20625 LYRLQFNEF True PC9_epitope_Rep1 1228.6240580544797 1228.62296993586 84.153 2 0.2093532452833243 0.00039635354736424893 0.0007699150714096888 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 85068 9613 QEISHLIEP True NCI_RA007_Epitope_Rep5 1064.55022440788 1064.54912993586 43.619 2 0.20935109584000774 0.00039635354736424893 0.0007699531593024584 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 107531 17108 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 71.056 2 0.20934993080889333 0.00039635354736424893 0.0007699738043121523 ['ENSG00000073756|ENST00000367468|PTGS2'] 134734 9035 VYTSGVYHI True NCI_RA007_Epitope_Rep4 1037.51819600361 1037.5170899358602 41.586 2 0.2093498657594428 0.00039635354736424893 0.0007699749570415441 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 88290 12654 QSELVGQLY True H1975_Epitope_Rep2 1035.52367530687 1035.52317496793 53.771 1 0.20934915778408336 0.00039635354736424893 0.0007699875030551047 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 48337 21194 IYSIDFTRF True PC9_epitope_Rep1 1160.5866099165999 1160.58550993586 86.357 2 0.20934409933277504 0.00039635354736424893 0.0007700771497113818 ['ENSG00000175970|ENST00000344651|UNC119B'] 70966 13217 LYGRHFNYL True PC9_epitope_Rep2 1181.59817765981 1181.5970899358601 56.117 2 0.20931568094880013 0.00039635354736424893 0.0007705809793955094 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 54060 19159 KVIEINPYL True PC9_epitope_Rep3 1087.62774645259 1087.62664993586 78.916 2 0.2093115974023774 0.00039635354736424893 0.0007706534037810297 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 118272 20307 TYLPAPEGLKF True PC9_epitope_Rep1 1234.65977485686 1234.6586699358602 82.939 2 0.20930840123489494 0.00039635354736424893 0.0007707100946807171 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 53031 9513 KPLEPVSTV True PC9_epitope_Rep5 968.55424715916 968.55314993586 41.55 2 0.20929898048378204 0.00039635354736424893 0.0007708772162902772 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 134653 17840 VYSQIPAAVKL True PC9_epitope_Rep1 1187.6914093383098 1187.6903099358601 73.415 2 0.20929522678294815 0.00039635354736424893 0.0007709438160694128 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 70973 18385 LYGRNFNYL True PC9_epitope_Rep3 1158.5821932425 1158.58108993586 75.925 2 0.20929469173894066 0.00039635354736424893 0.0007709533095209765 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 139105 9045 YLDKGILKY True H1975_Epitope_Rep3 1111.62774645259 1111.62664993586 39.779 2 0.20928829767208404 0.00039635354736424893 0.0007710667705057903 ['OSBPL3|p.E121Sfs*6|1|0.3|ENSG00000070882|chr7:24870752-24870752|C/-|frameshift_variant', 'nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 140756 16876 YSDEFGNLDF True H1975_Epitope_Rep2 1205.4876837209702 1205.4865899358601 70.159 2 0.2092749631338811 0.00039635354736424893 0.0007713034421737175 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 62464 18446 LLIDDKGTIKL True PC9_epitope_Rep3 1227.74383883399 1227.74218490379 76.157 3 0.20927113496622546 0.00039635354736424893 0.000771371400909164 ['ENSG00000170312|ENST00000395284|CDK1'] 54801 15067 KYPDIISRI True PC9_epitope_Rep2 1103.63389446219 1103.63278993586 63.212 2 0.20926843844532772 0.00039635354736424893 0.000771419273931125 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 6897 3534 AQIENSAAVQK True NCI_RA007_Epitope_Rep4 1157.6040508858898 1157.6029499358601 19.596 2 0.20926361745608324 0.00039635354736424893 0.0007715048713967617 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 70000 7804 LVLVGDGGTGK True NCI_RA007_Epitope_Rep1 1014.57095985246 1014.56986993586 34.346 2 0.2092608382666862 0.00039635354736424893 0.0007715542206963588 ['ENSG00000132341|ENST00000543796|RAN'] 78513 21139 NYPETLGRLLI True PC9_epitope_Rep1 1287.7186867153098 1287.7175899358601 86.141 2 0.20925465720850858 0.00039635354736424893 0.0007716639873956584 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 120610 5517 VEHSDLSFSK True NCI_RA007_Epitope_Rep2 1147.5509526838698 1147.54930490379 26.075 3 0.20925148346160302 0.00039635354736424893 0.000771720354661151 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 120651 5553 VEILANDQGNR True NCI_RA007_Epitope_Rep5 1227.6207635791898 1227.6196699358602 28.045 2 0.20923716022853497 0.00039635354736424893 0.0007719747935337721 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 132749 13354 VVINFDFPK True NCI_RA007_Epitope_Rep3 1077.5858816406098 1077.58478993586 59.792 2 0.2092346738473443 0.00039635354736424893 0.0007720189703479039 ['ENSG00000110367|ENST00000534980|DDX6'] 140405 10853 YRFETVQKL True PC9_epitope_Rep4 1182.6397081186199 1182.63805490379 49.504 3 0.20920349990796636 0.00039635354736424893 0.0007725730690616026 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 131424 16256 VTIEDVQKL True PC9_epitope_Rep5 1043.58627556343 1043.5851699358602 67.52 2 0.20920219781587257 0.00039635354736424893 0.0007725962216726148 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 93519 8862 RQLDTETNL True PC9_epitope_Rep5 1088.5462016566 1088.5451099358602 39.031 2 0.2092006125251264 0.00039635354736424893 0.0007726244108027487 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant'] 27864 20885 FQDPVPLTV True PC9_epitope_Rep2 1014.5385970950199 1014.53750993586 85.777 2 0.20919916271966943 0.00039635354736424893 0.0007726501916803694 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 140359 11797 YRDPTTVTTL True PC9_epitope_Rep4 1165.59790287629 1165.5968099358602 53.146 2 0.20919702904967036 0.00039635354736424893 0.000772688134813075 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 137379 10939 YDSYLGDDYVR True NCI_RA007_Epitope_Rep1 1364.5884603913998 1364.5873699358601 46.543 2 0.20919235831807947 0.00039635354736424893 0.0007727712011311307 ['CON__Q29443', 'CON__Q0IIK2'] 2481 5543 AEQLRMEET True H1975_Epitope_Rep3 1105.5073736197298 1105.50626993586 26.37 2 0.20918226705974724 0.00039635354736424893 0.0007729506990377256 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 87720 6967 QRAITGASL True PC9_epitope_Rep4 915.5137793295099 915.51268993586 34.038 2 0.20917708804985552 0.00039635354736424893 0.0007730428367373822 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 106389 8977 STIEYVIQR True NCI_RA007_Epitope_Rep4 1107.59242357303 1107.5913299358601 41.365 2 0.2091729789483609 0.00039635354736424893 0.0007731159479625396 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 27863 20888 FQDPVPLTV True PC9_epitope_Rep2 1014.5385970950199 1014.53807496793 85.789 1 0.20916564848345034 0.00039635354736424893 0.0007732463925513611 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 94784 5281 RSNPYYIVK True NCI_RA007_Epitope_Rep3 1138.61349337078 1138.6123899358602 27.78 2 0.20914957590018904 0.00039635354736424893 0.0007735324791885241 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 21165 11392 ERDAYVQAL True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 49.142 2 0.2091489317548749 0.00039635354736424893 0.0007735439469737815 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 106184 8029 STDPSVLGKY True H1975_Epitope_Rep1 1065.5342399905699 1065.5331499358601 35.827 2 0.20914004154090785 0.00039635354736424893 0.000773702237789645 ['ENSG00000114315|ENST00000232424|HES1'] 107496 2634 SVNGKVLSK True NCI_RA007_Epitope_Rep4 930.5498304850599 930.54872993586 14.754 2 0.2091357024014068 0.00039635354736424893 0.0007737795082403043 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 106749 20639 STYKFFEVI True PC9_epitope_Rep2 1132.580461907 1132.57936993586 84.822 2 0.2091281473871694 0.00039635354736424893 0.0007739140647628075 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 92471 13523 RLTEEFQNV True PC9_epitope_Rep5 1134.56693710118 1134.5658499358601 57.038 2 0.20912722089576244 0.00039635354736424893 0.0007739305674013369 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000486040.1_1_7:2274759-2277695:-|nuORF'] 11846 8094 DHHENKYLL True PC9_epitope_Rep5 1167.56727145435 1167.5661699358602 36.072 2 0.20912384130678574 0.00039635354736424893 0.0007739907675364747 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 140879 9650 YSEDHIIGAY True H1975_Epitope_Rep3 1166.5244035828598 1166.5233099358602 42.135 2 0.20912160029407578 0.00039635354736424893 0.000774030688965727 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 90657 8270 REQDLPLAEA True H1975_Epitope_Rep1 1140.5775017848798 1140.57640993586 36.745 2 0.20911861802556622 0.00039635354736424893 0.0007740838183389963 ['ENSG00000169895|ENST00000380155|SYAP1'] 138787 22402 YIVDLLTHL True PC9_epitope_Rep1 1085.61209638845 1085.61098993586 90.989 2 0.20910358104528073 0.00039635354736424893 0.0007743517591868096 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 77534 11673 NTDIAENLY True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 50.037 2 0.20910234452097118 0.00039635354736424893 0.0007743737966979802 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 68269 7453 LTEDKETLQY True H1975_Epitope_Rep2 1238.60304782638 1238.6019499358601 33.614 2 0.20909608192999213 0.00039635354736424893 0.0007744854191437212 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2'] 21247 19739 ERDPVLWSL True PC9_epitope_Rep4 1113.58185888933 1113.5807699358602 84.05 2 0.209091518569357 0.00039635354736424893 0.0007745667652100592 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 111501 16233 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62844993586 70.381 2 0.2090873981140719 0.00039635354736424893 0.0007746402234484339 ['ENSG00000076003|ENST00000264156|MCM6'] 107641 9165 SVQETVLPIK True NCI_RA007_Epitope_Rep5 1112.6441247927198 1112.64302993586 41.902 2 0.20908540279647117 0.00039635354736424893 0.0007746757978825276 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 27879 14538 FQDPYTRSL True PC9_epitope_Rep5 1125.54547338061 1125.54436993586 60.919 2 0.20908251309527823 0.00039635354736424893 0.0007747273211499263 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 8364 17512 ATLKELTSL True PC9_epitope_Rep5 974.56481184286 974.56370993586 72.365 2 0.2090813939310989 0.00039635354736424893 0.0007747472767301701 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 48002 22301 IYLDLPQNF True PC9_epitope_Rep5 1121.57571087973 1121.57460993586 90.788 2 0.20908124569180656 0.00039635354736424893 0.0007747499199923747 ['RNF14|p.L342Vfs*10|1|0.21|ENSG00000013561|chr5:141980309-141980310|-/G|frameshift_variant', 'ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 25403 11740 FEDENFILK True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 50.15 2 0.20907074621866914 0.00039635354736424893 0.0007749371596362753 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 137524 6361 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 29.458 2 0.20906880190117966 0.00039635354736424893 0.0007749718381017818 ['ENSG00000127184|ENST00000247655|COX7C'] 86003 10279 QHLQATGVSL True PC9_epitope_Rep4 1052.56145779792 1052.56036993586 47.225 2 0.20906481948050107 0.00039635354736424893 0.0007750428726363478 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 28985 9970 FTEEELARY True H1975_Epitope_Rep2 1156.5400536469997 1156.53894993586 43.338 2 0.20906220585776417 0.00039635354736424893 0.0007750894954388635 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 104214 18517 SQHEEFLEL True PC9_epitope_Rep1 1130.5244035828598 1130.5233099358602 76.015 2 0.20905521970387303 0.00039635354736424893 0.0007752141309375763 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 131144 5660 VTEIDQDKY True H1975_Epitope_Rep1 1109.5240692296898 1109.5229699358601 26.841 2 0.20904386046678516 0.00039635354736424893 0.0007754168267389102 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 63259 12008 LLSNDEVTIK True PC9_epitope_Rep5 1130.6183039677 1130.61720993586 51.183 2 0.20903576727655718 0.00039635354736424893 0.0007755612751825992 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 99626 4851 SIFKQPVTK True NCI_RA007_Epitope_Rep5 1046.61243074162 1046.61132993586 25.351 2 0.20902521525168447 0.00039635354736424893 0.000775749649811024 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 90133 8454 REDDVPFTA True H1975_Epitope_Rep3 1048.48253877088 1048.4814499358602 37.503 2 0.20901532958918334 0.00039635354736424893 0.0007759261701904635 ['ENSG00000103148|ENST00000611875|NPRL3', 'NPRL3|p.R422P|1|0.19|ENSG00000103148|chr16:89799-89799|C/G|missense_variant'] 139155 12769 YLDWAYRSGGY True H1975_Epitope_Rep2 1349.6040508858898 1349.6029499358601 54.219 2 0.2090100417399218 0.00039635354736424893 0.0007760206076326078 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 71029 21231 LYIVEPLKF True PC9_epitope_Rep1 1120.6532329244399 1120.65212993586 86.489 2 0.20900183326550126 0.00039635354736424893 0.0007761672283252246 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 140735 10242 YSDDGQKWTVY True H1975_Epitope_Rep1 1360.5935457718401 1360.59244993586 44.339 2 0.20899416878329766 0.00039635354736424893 0.0007763041572574702 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2'] 114120 4477 TPGPGAQSALR True H1975_Epitope_Rep3 1053.55670677065 1053.55560993586 22.339 2 0.20898385787854487 0.00039635354736424893 0.0007764884037810249 ['ENSG00000164587|ENST00000407193|RPS14'] 69902 12403 LVILEGELER True NCI_RA007_Epitope_Rep2 1169.6655885132898 1169.66448993586 52.853 2 0.2089806058742796 0.00039635354736424893 0.0007765465232495949 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 3963 6815 AHDQNSNLL True PC9_epitope_Rep3 1010.47812209678 1010.47702993586 31.231 2 0.20897685331443835 0.00039635354736424893 0.0007766135940168085 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'TGM2|p.E314K|1|0.17|ENSG00000198959|chr20:38142119-38142119|C/T|missense_variant'] 140537 19821 YRPETGSWVF True PC9_epitope_Rep3 1240.58767254576 1240.58656993586 81.474 2 0.2089721632904578 0.00039635354736424893 0.0007766974285673975 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 48029 16595 IYLPYLHEW True NCI_RA007_Epitope_Rep5 1232.62299542532 1232.62188993586 70.594 2 0.20896156868489846 0.00039635354736424893 0.0007768868414026174 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 118091 17868 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 81.357 2 0.2089352455808296 0.00039635354736424893 0.0007773576526371457 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 48438 8009 IYYITGETK True H1975_Epitope_Rep3 1086.55972646242 1086.5586299358602 35.779 2 0.20892307854018807 0.00039635354736424893 0.0007775753672867421 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 28970 13258 FTDVNSILRY True H1975_Epitope_Rep1 1226.62953735774 1226.62844993586 56.096 2 0.20891381017423954 0.00039635354736424893 0.000777741254663623 ['ENSG00000136628|ENST00000366923|EPRS1'] 97925 5940 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 27.83 2 0.20891234662793445 0.00039635354736424893 0.0007777674528025981 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 112176 10746 TKEVNSGFFY True H1975_Epitope_Rep2 1190.5607890915799 1190.5596899358602 46.361 2 0.20891150322530225 0.00039635354736424893 0.0007777825504922139 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 41800 10793 IASPEGQDYLK True PC9_epitope_Rep2 1219.6084675599898 1219.60736993586 46.833 2 0.20888677501350902 0.00039635354736424893 0.0007782253391318884 ['ENSG00000100220|ENST00000216038|RTCB'] 49893 20524 KIIDEDGLLNL True PC9_epitope_Rep2 1241.68671788069 1241.68562993586 84.377 2 0.2088863764607474 0.00039635354736424893 0.000778232477773126 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 99422 14190 SHYQSIGVSL True PC9_epitope_Rep2 1089.54547338061 1089.54436993586 59.85 2 0.20888601941593893 0.00039635354736424893 0.0007782388730042541 ['ENST00000314471.10_1_19:39842996-39844702:+|nuORF'] 86933 19994 QLVDIIEKV True PC9_epitope_Rep2 1055.62266107215 1055.6215699358602 82.309 2 0.20888557958922718 0.00039635354736424893 0.0007782467510612592 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 90935 10544 REYQELMSV True NCI_RA007_Epitope_Rep1 1153.54375912845 1153.5426699358602 44.998 2 0.20888344317970622 0.00039635354736424893 0.000778285018988456 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 64389 8998 LPLQDVYK True H1975_Epitope_Rep1 974.5436824754598 974.54258993586 39.517 2 0.2088806409142833 0.00039635354736424893 0.0007783352167630532 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000514975.1_1_4:106406529-106406643:+|nuORF', 'ENST00000359165.5_1_12:19609713-19609968:-|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 9797 20519 AYKYIQELW True PC9_epitope_Rep5 1212.6179100448796 1212.6168099358601 83.969 2 0.20887354899378627 0.00039635354736424893 0.0007784622708567449 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 78379 11700 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.6069699358602 56.138 2 0.20884934178285466 0.00039635354736424893 0.0007788961077611431 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 66184 9000 LSERADWQY True H1975_Epitope_Rep2 1166.5356369729 1166.53452993586 39.569 2 0.20884579821712151 0.00039635354736424893 0.0007789596352024759 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 90583 7513 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 33.88 2 0.20884282774652793 0.00039635354736424893 0.0007790128924587033 ['ENSG00000026025|ENST00000544301|VIM'] 18362 8883 EITALAPSTM[Oxidation]K True PC9_epitope_Rep2 1176.6060254122801 1176.6049299358601 39.521 2 0.20883716192542967 0.00039635354736424893 0.0007791144845005948 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 134839 19478 VYVDLGGSHVF True PC9_epitope_Rep2 1191.5924235730301 1191.5913299358601 80.302 2 0.20882465760373364 0.00039635354736424893 0.0007793387425671498 ['ENSG00000165733|ENST00000374518|BMS1'] 106170 12605 STDPLDAGVDY True H1975_Epitope_Rep2 1151.4982484046698 1151.49714993586 53.582 2 0.20882190846311552 0.00039635354736424893 0.0007793880555606692 ['ENSG00000139645|ENST00000267116|ANKRD52'] 130221 9906 VSEVSSLNY True H1975_Epitope_Rep2 996.4763907612801 996.47584496793 43.092 1 0.20881804491791753 0.00039635354736424893 0.0007794573635922663 ['ENSG00000117000|ENST00000372771|RLF'] 71929 14181 M[Oxidation]EQPLDLTHIV True H1975_Epitope_Rep2 1310.65403823386 1310.65294993586 59.699 2 0.20881793289745895 0.00039635354736424893 0.0007794593732164402 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 2403 7923 AEQEPTAEQLA True H1975_Epitope_Rep3 1185.55134660669 1185.5502499358602 35.445 2 0.2088119160697621 0.00039635354736424893 0.0007795673215157351 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 103354 9162 SPNSILKAA True PC9_epitope_Rep3 899.5076313199099 899.50652993586 40.182 2 0.20880776997539308 0.00039635354736424893 0.00077964171559406 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK'] 26752 7160 FKDLGEENFK True NCI_RA007_Epitope_Rep4 1225.5979028762897 1225.5962549037902 34.164 3 0.20880738722336525 0.00039635354736424893 0.0007796485837380545 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 15300 6219 EAFNM[Oxidation]IDQNR True NCI_RA007_Epitope_Rep5 1252.5506357944798 1252.5495299358602 30.598 2 0.2088064422828939 0.00039635354736424893 0.0007796655401125002 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 88666 11848 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep1 1318.5751192068199 1318.5740299358602 50.572 2 0.20880486062856618 0.00039635354736424893 0.0007796939227526097 ['ENSG00000167325|ENST00000300738|RRM1'] 140373 11691 YRDPYTGQSV True PC9_epitope_Rep5 1184.5462016566 1184.5451099358602 49.966 2 0.20880288332162417 0.00039635354736424893 0.000779729406800085 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 118173 11963 TYISWKEEL True NCI_RA007_Epitope_Rep3 1167.58119018299 1167.58008993586 54.178 2 0.20879797304140166 0.00039635354736424893 0.0007798175319505289 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 65756 6839 LSDDHGASWRY True H1975_Epitope_Rep3 1305.5738133867699 1305.57270993586 31.262 2 0.20878782109638894 0.00039635354736424893 0.0007799997613195039 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 15021 20199 DYLEHITSI True PC9_epitope_Rep1 1089.53423999057 1089.5331499358601 82.525 2 0.20878551183952626 0.00039635354736424893 0.0007800412188887819 ['ENSG00000099219|ENST00000339450|ERMP1', 'ENST00000475005.1_1_9:5812814-5833063:-|nuORF', 'ENST00000214893.9_1_9:5823966-5832826:-|nuORF'] 62199 5247 LLEQYKEESK True NCI_RA007_Epitope_Rep1 1265.6503323719696 1265.6486849037901 24.493 3 0.20878321291384133 0.00039635354736424893 0.0007800824931805072 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 17603 12780 EHINEGETAML True PC9_epitope_Rep3 1242.55505208814 1242.5539499358601 54.18 2 0.20878001639836155 0.00039635354736424893 0.0007801398861984564 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 55139 15537 LAAEFLKQV True PC9_epitope_Rep6 1017.5858816406097 1017.58478993586 71.944 2 0.2087799427268628 0.00039635354736424893 0.0007801412090105353 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 118643 16122 TYSPALNKMF True PC9_epitope_Rep6 1170.5743309807401 1170.5732299358601 74.355 2 0.20877012446833357 0.00039635354736424893 0.0007803175213498088 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 108793 19560 SYTRLFSNF True PC9_epitope_Rep2 1133.5505587610498 1133.54946993586 80.619 2 0.2087701087688851 0.00039635354736424893 0.0007803178033062005 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 139005 19598 YKVEYPIMY True PC9_epitope_Rep1 1204.58383303528 1204.58272993586 80.211 2 0.20876976096344418 0.00039635354736424893 0.0007803240497918045 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 24271 18638 EYTDVLQKI True PC9_epitope_Rep5 1107.58119018299 1107.58008993586 76.716 2 0.20876049267311864 0.00039635354736424893 0.0007804905240988138 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 54680 16865 KYLSVQGQLF True PC9_epitope_Rep6 1181.64445914589 1181.6433699358602 77.39 2 0.20875231509983425 0.00039635354736424893 0.0007806374368534679 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 112173 10460 TKEVNSGFFY True H1975_Epitope_Rep1 1190.5607890915799 1190.5596899358602 45.189 2 0.20874529708299336 0.00039635354736424893 0.0007807635399211133 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 47966 23676 IYIWDLNNF True PC9_epitope_Rep1 1196.5866099165999 1196.58550993586 95.861 2 0.20874091601650094 0.00039635354736424893 0.0007808422713699006 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 138487 14489 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 60.557 2 0.20873493006203808 0.00039635354736424893 0.0007809498568807291 ['ENSG00000115306|ENST00000356805|SPTBN1'] 7174 5390 AQYEEIAQR True NCI_RA007_Epitope_Rep4 1106.5356369728997 1106.53452993586 27.301 2 0.20873048900477117 0.00039635354736424893 0.0007810296855758622 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 98251 10292 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 44.594 2 0.20872907858103057 0.00039635354736424893 0.000781055039874704 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 84525 11810 QAQEVFFLK True NCI_RA007_Epitope_Rep4 1108.59169529704 1108.5905899358602 52.404 2 0.208719916364067 0.00039635354736424893 0.0007812197633808613 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 40526 5275 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 28.081 2 0.20871633564488606 0.00039635354736424893 0.000781284149041958 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 2200 9744 AEMDERFQQI True H1975_Epitope_Rep2 1265.57103650545 1265.56992993586 42.468 2 0.20871197315149145 0.00039635354736424893 0.0007813625991426366 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'nc|ENSG00000148356|Q6UWE0-3|LRSAM1', 'ENST00000483302.5_1_9:130248105-130265175:+|nuORF'] 108572 21343 SYNPLWLRI True PC9_epitope_Rep1 1160.6342288153598 1160.63312993586 86.927 2 0.20871094220165046 0.00039635354736424893 0.0007813811397219859 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 40177 12526 HQELFPHSL True PC9_epitope_Rep2 1106.55089311422 1106.5497899358602 53.488 2 0.20870843290478028 0.00039635354736424893 0.0007814262687063755 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 92353 16047 RLPDIPLRQV True PC9_epitope_Rep1 1205.72444080209 1205.72278490379 66.539 3 0.20868302498695415 0.00039635354736424893 0.00078188337012661 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 110428 11999 TEYSFLKEV True NCI_RA007_Epitope_Rep3 1114.55464108198 1114.55354993586 54.323 2 0.20867616179692675 0.00039635354736424893 0.0007820068884294233 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 28921 5054 FTDKSAEDY True H1975_Epitope_Rep2 1074.4505699362599 1074.4494699358602 24.522 2 0.20867212448554648 0.00039635354736424893 0.0007820795579326408 ['ENST00000533568.5_1_11:77069900-77103583:-|nuORF', 'ENSG00000149269|ENST00000356341|PAK1', 'nc|ENSG00000149269|Q13153-2|PAK1'] 74919 16763 NHIEPLKIQL True PC9_epitope_Rep5 1203.6975573479099 1203.69592490379 69.483 3 0.2086656957812368 0.00039635354736424893 0.0007821952852461593 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 70545 18311 LVYPEELKPVL True PC9_epitope_Rep6 1298.74858986126 1298.7474899358601 83.076 2 0.20866510999117976 0.00039635354736424893 0.0007822058312903333 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 49912 19411 KIIGIMEEV True PC9_epitope_Rep3 1030.5732683515798 1030.57216993586 79.89 2 0.2086648059255326 0.00039635354736424893 0.0007822113054745602 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 107976 15041 SVYVQLEKV True PC9_epitope_Rep5 1063.5913609438699 1063.59026993586 62.859 2 0.20866228073175985 0.00039635354736424893 0.000782256768773612 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 43731 9331 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 46.074 2 0.20866226671668078 0.00039635354736424893 0.0007822570211068849 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 25765 5922 FETLQAQAGK True H1975_Epitope_Rep3 1091.5611234447497 1091.56002993586 27.788 2 0.20866123816769538 0.00039635354736424893 0.0007822755397505949 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 77101 15695 NRLTEMETL True PC9_epitope_Rep5 1105.5437591284501 1105.5426699358602 65.379 2 0.2086600667815312 0.00039635354736424893 0.0007822966306604895 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 23828 19354 EYIKFLRSI True PC9_epitope_Rep3 1167.6651945904698 1167.6640899358601 79.667 2 0.20865768898182638 0.00039635354736424893 0.0007823394449055213 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 138056 13865 YGEPGEVFINK True PC9_epitope_Rep2 1251.6135529404298 1251.61244993586 58.615 2 0.20865720030101942 0.00039635354736424893 0.0007823482442977373 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 107367 13592 SVLISLKQA True PC9_epitope_Rep2 957.58588164061 957.58478993586 57.571 2 0.20863783205252345 0.00039635354736424893 0.0007826970770912902 ['nc|ENSG00000122705|P09496-5|CLTA', 'ENSG00000122705|ENST00000345519|CLTA', 'nc|ENSG00000122705|P09496-4|CLTA', 'nc|ENSG00000122705|P09496-3|CLTA', 'nc|ENSG00000122705|P09496|CLTA'] 30059 16633 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6166049037902 71.946 3 0.20863006288948271 0.00039635354736424893 0.0007828370478296707 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 99624 4671 SIFKQPVTK True NCI_RA007_Epitope_Rep5 1046.61243074162 1046.61132993586 24.65 2 0.20862678752670327 0.00039635354736424893 0.0007828960649212315 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 60054 11969 LGLDYEER True PC9_epitope_Rep3 993.4767251144499 993.47562993586 51.062 2 0.20858855976385418 0.00039635354736424893 0.0007835852016272282 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000544888.5_1_12:7077022-7079603:-|nuORF'] 142868 19519 YYTKGFALL True PC9_epitope_Rep2 1074.5749826037397 1074.57388993586 80.464 2 0.20858745450765062 0.00039635354736424893 0.0007836051352694013 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 83318 14985 PTDYADIMM[Oxidation]GY True H1975_Epitope_Rep2 1291.51007642211 1291.50896993586 62.79 2 0.20858486900241877 0.00039635354736424893 0.0007836517676538624 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 111382 9053 THSDIQVKL True PC9_epitope_Rep5 1039.56620882519 1039.5651099358602 39.767 2 0.20857072429262272 0.00039635354736424893 0.0007839069320811557 ['ENSG00000105223|ENST00000409735|PLD3'] 87871 17593 QRIDEFEAL True PC9_epitope_Rep5 1119.5560380643099 1119.5549499358601 72.68 2 0.20855394989584736 0.00039635354736424893 0.0007842096429570365 ['ENSG00000092820|ENST00000367075|EZR'] 92505 20773 RLYDGLFKVI True PC9_epitope_Rep1 1222.70739375562 1222.70575490379 84.731 3 0.20855100280659902 0.00039635354736424893 0.0007842628382592006 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 33983 14950 GLSTEGIYRV True PC9_epitope_Rep1 1093.57677350889 1093.57566993586 62.327 2 0.2085336640053941 0.00039635354736424893 0.0007845758789358558 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 30126 20868 FYMDTSHLF True PC9_epitope_Rep2 1159.5008316873098 1159.4997299358602 85.714 2 0.2085327301758115 0.00039635354736424893 0.0007845927421730353 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 44495 21734 ILLKDILSV True PC9_epitope_Rep1 1012.65323292444 1012.65212993586 88.431 2 0.208532618577502 0.00039635354736424893 0.0007845947574566698 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant', 'ATM|p.L210Wfs*20|1|0.12|ENSG00000149311|chr11:108244081-108244081|T/-|frameshift_variant', 'ATM|p.R250Sfs*3|1|0.24|ENSG00000149311|chr11:108244873-108244874|CG/-|frameshift_variant'] 105614 9435 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4603699358602 41.293 2 0.20852594587196868 0.00039635354736424893 0.0007847152650847397 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 142492 22309 YYIEGIENSVF True PC9_epitope_Rep5 1332.62378327096 1332.62268993586 90.818 2 0.20852554040343918 0.00039635354736424893 0.0007847225883576577 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 29277 7012 FVALSTNTTK True NCI_RA007_Epitope_Rep1 1080.58152453616 1080.5804299358601 31.273 2 0.20851540980246638 0.00039635354736424893 0.0007849055820435189 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI'] 9616 21567 AYALLSHFL True PC9_epitope_Rep5 1033.5596668927699 1033.55856993586 87.997 2 0.20851091476130598 0.00039635354736424893 0.0007849867917421578 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 64065 7836 LPASNLAGKEA True PC9_epitope_Rep3 1069.57677350889 1069.57566993586 35.13 2 0.20850608500847956 0.00039635354736424893 0.0007850740579059787 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 99621 4643 SIFKQPVTK True NCI_RA007_Epitope_Rep3 1046.61243074162 1046.61132993586 25.186 2 0.20850364283450343 0.00039635354736424893 0.0007851181879173515 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 31241 10913 GDEELDSLIK True H1975_Epitope_Rep1 1117.5502839775297 1117.54918993586 46.939 2 0.20850355509978624 0.00039635354736424893 0.0007851197733273957 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 76928 10473 NRDQYSHLL True PC9_epitope_Rep3 1144.56252042708 1144.56088490379 45.222 3 0.20849755106780116 0.00039635354736424893 0.0007852282768070558 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 14649 5874 DVEDESTGLEK True H1975_Epitope_Rep3 1220.5408414926399 1220.53974993586 27.605 2 0.20849199064793353 0.00039635354736424893 0.0007853287768479217 ['ENSG00000206075|ENST00000382771|SERPINB5'] 77535 11690 NTDIAENLY True H1975_Epitope_Rep3 1051.48220441771 1051.4816749679298 50.105 1 0.2084804450054496 0.00039635354736424893 0.0007855374961079671 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 40228 12175 HQIEAVDGEEL True PC9_epitope_Rep2 1238.5778957076998 1238.57678993586 52.143 2 0.20847812311680317 0.00039635354736424893 0.0007855794773553395 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 39739 13106 HLVDEPQNLIK True PC9_epitope_Rep5 1304.7088503076 1304.7077499358602 55.416 2 0.2084724195760181 0.00039635354736424893 0.0007856826106142044 ['CON__P02769'] 117232 14282 TVLQKMNEI True PC9_epitope_Rep1 1074.57433098074 1074.5732299358601 59.761 2 0.20846380127709474 0.00039635354736424893 0.0007858384752366496 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.A926S|1|0.16|ENSG00000196878|chr1:209618585-209618585|C/A|missense_variant'] 111218 5945 THISSQNSEL True PC9_epitope_Rep1 1114.52546621202 1114.52436993586 27.681 2 0.20845592022387022 0.00039635354736424893 0.0007859810336933728 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 38816 12466 HHALPITDL True PC9_epitope_Rep2 1015.54507945779 1015.5439899358599 53.261 2 0.20845034106553942 0.00039635354736424893 0.0007860819694166079 ['ENSG00000065268|ENST00000585809|WDR18'] 95653 8620 RYFDPANGKF True NCI_RA007_Epitope_Rep5 1213.5880068989297 1213.5869099358601 39.832 2 0.20844237674644644 0.00039635354736424893 0.0007862260789695348 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 88835 7173 QVASTLKQV True PC9_epitope_Rep1 972.5603951687598 972.55928993586 32.402 2 0.20844104086314194 0.00039635354736424893 0.0007862502535681003 ['ENSG00000166295|ENST00000299381|ANAPC16'] 71004 20158 LYIGWDKHYGF True PC9_epitope_Rep3 1397.67682190333 1397.6751749037899 82.792 3 0.2084274123821767 0.00039635354736424893 0.0007864969218067578 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 72285 8675 MIDETRNSLY True H1975_Epitope_Rep3 1240.5757875327201 1240.57468993586 38.366 2 0.20841487561507493 0.00039635354736424893 0.0007867238991608216 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 13781 20868 DQIAKYWEL True PC9_epitope_Rep3 1164.5815245361598 1164.5804299358601 85.541 2 0.20841347918416142 0.00039635354736424893 0.0007867491855189216 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 22279 13738 ETDEKDFYLYY True H1975_Epitope_Rep1 1484.6347418774799 1484.6336499358601 57.983 2 0.20841001395943592 0.00039635354736424893 0.0007868119368019905 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 141356 5385 YTDVSTRY True H1975_Epitope_Rep3 1003.46107505031 1003.45996993586 25.78 2 0.20840210927881664 0.00039635354736424893 0.0007869551003791615 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 137654 14404 YEIKQFLECA True H1975_Epitope_Rep1 1242.59546034814 1242.5943699358602 60.601 2 0.20839920786044874 0.00039635354736424893 0.0007870076552230744 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2'] 26009 20266 FGFVTFDDHD True PC9_epitope_Rep2 1198.4931034545798 1198.49200993586 83.373 2 0.20839555266406787 0.00039635354736424893 0.0007870738686375396 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 35955 6479 GTTM[Oxidation]YPGIADR True H1975_Epitope_Rep3 1196.5495731653198 1196.54846993586 29.889 2 0.20838764237175128 0.00039635354736424893 0.0007872171817046507 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 6622 18172 APWKPTWPA True PC9_epitope_Rep1 1052.5443511817998 1052.54324993586 74.688 2 0.20838645209045156 0.00039635354736424893 0.0007872387486430332 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23', 'PRSS23|p.A166Qfs*19|1|0.13|ENSG00000150687|chr11:86808138-86808138|G/-|frameshift_variant'] 62053 10049 LLDTAQRALY True H1975_Epitope_Rep1 1162.6346227381798 1162.63352993586 43.593 2 0.2083843708570729 0.00039635354736424893 0.0007872764603397592 ['ENSG00000249471|ENST00000336614|ZNF324B', 'ENSG00000083812|ENST00000196482|ZNF324'] 133473 11062 VWAAVPGKTF True NCI_RA007_Epitope_Rep5 1074.58621599378 1074.5851099358601 49.185 2 0.2083820208986747 0.00039635354736424893 0.0007873190434797098 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 10140 13632 AYVHMVTHF True PC9_epitope_Rep5 1103.52223583823 1103.52167496793 57.459 1 0.2083767841410272 0.00039635354736424893 0.0007874139460605317 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 43723 9645 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 44.723 2 0.2083639415118355 0.00039635354736424893 0.0007876467338202401 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 70845 21125 LYDIILKNF True PC9_epitope_Rep2 1137.64339651673 1137.6422899358602 86.716 2 0.20834652598012637 0.00039635354736424893 0.0007879625211127237 ['ENSG00000092010|ENST00000206451|PSME1'] 90963 6508 REYWNEQSA True H1975_Epitope_Rep3 1181.51015050105 1181.50904993586 30.003 2 0.2083405153685877 0.00039635354736424893 0.0007880715380625462 ['ENSG00000065308|ENST00000182527|TRAM2'] 23573 10666 EVYELLDSPGK True H1975_Epitope_Rep1 1248.6237832709596 1248.62268993586 45.985 2 0.20834028883980923 0.00039635354736424893 0.0007880756470046445 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 62707 18965 LLLNNDNLLR True PC9_epitope_Rep1 1196.6877209401998 1196.68662993586 77.732 2 0.2083348516661677 0.00039635354736424893 0.0007881742768242778 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 78265 20675 NYIEFTRIL True PC9_epitope_Rep2 1167.62880908175 1167.6277099358601 84.962 2 0.20833004462508783 0.00039635354736424893 0.0007882614864120056 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 14403 10391 DTDHYFLRY True H1975_Epitope_Rep3 1228.5512870370399 1228.5496349037899 45.026 3 0.2083208906878691 0.00039635354736424893 0.0007884275843838797 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 110048 5410 TELDKIRQA True NCI_RA007_Epitope_Rep5 1072.58767254576 1072.58656993586 27.498 2 0.2083171697972837 0.00039635354736424893 0.00078849510989071 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 140580 10718 YRQKQVVIL True PC9_epitope_Rep5 1145.6920780446499 1145.6909899358602 46.217 2 0.2083059221444513 0.00039635354736424893 0.0007886992638978115 ['ENSG00000143179|ENST00000367879|UCK2'] 97928 5699 SENEYIM[Oxidation]KA True H1975_Epitope_Rep3 1099.4855759264299 1099.48446993586 26.951 2 0.2082949861606116 0.00039635354736424893 0.0007888978117040384 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 17981 5093 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 24.672 2 0.20828971341835387 0.00039635354736424893 0.0007889935586752182 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 28963 9925 FTDVIGHY True H1975_Epitope_Rep2 950.4497820906199 950.44868993586 43.165 2 0.20828594325258115 0.00039635354736424893 0.000789062027723126 ['ENSG00000090432|ENST00000264198|MUL1'] 138612 8465 YIDQGRNPQLY True H1975_Epitope_Rep2 1365.66771377161 1365.6666099358602 37.514 2 0.20828091855909117 0.00039635354736424893 0.0007891532892045282 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 26844 12401 FLDDFESKY True H1975_Epitope_Rep2 1162.51825557326 1162.51714993586 52.787 2 0.20827737521019127 0.00039635354736424893 0.0007892176519879031 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2', 'nc|ENSG00000171475|Q8TF74-2|WIPF2'] 65806 12523 LSDISVVSNY True H1975_Epitope_Rep3 1095.54480467427 1095.54370993586 53.366 2 0.20827714682225235 0.00039635354736424893 0.0007892218006969237 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 15077 21021 DYSSILQKF True PC9_epitope_Rep1 1099.55497543515 1099.5538699358601 85.685 2 0.2082733572917567 0.00039635354736424893 0.0007892906414103587 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 38970 19132 HHIYLEGTLL True PC9_epitope_Rep3 1194.6397081186199 1194.6386099358601 78.813 2 0.2082729682401233 0.00039635354736424893 0.0007892977092738059 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 111528 20019 TIAEGLTLAQV True PC9_epitope_Rep4 1114.62338934814 1114.6222899358602 85.138 2 0.20826836048127112 0.00039635354736424893 0.0007893814228130385 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 25336 10720 FDVSGYPTLK True H1975_Epitope_Rep3 1125.57062549929 1125.5695299358601 46.311 2 0.20826609277136307 0.00039635354736424893 0.000789422625727052 ['ENSG00000155660|ENST00000652332|PDIA4'] 74519 21538 NFIVWLEDQK True PC9_epitope_Rep5 1290.66083748602 1290.6597499358602 87.882 2 0.20826370956095427 0.00039635354736424893 0.0007894659295402748 ['ENSG00000087302|ENST00000261700|RTRAF'] 25398 6028 FEDDYTHSA True H1975_Epitope_Rep2 1083.41451878071 1083.4134299358602 28.165 2 0.2082504708823253 0.00039635354736424893 0.0007897065246095438 ['ENSG00000162664|ENST00000340281|ZNF326', 'nc|ENSG00000162664|Q5BKZ1-2|ZNF326'] 85874 15254 QHFDSVMQL True PC9_epitope_Rep6 1103.5069796969099 1103.50588993586 70.783 2 0.20823349128305588 0.00039635354736424893 0.0007900152135240819 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 118079 20091 TYGEIFEKF True PC9_epitope_Rep3 1132.54407639828 1132.5429699358601 82.532 2 0.2082298373834845 0.00039635354736424893 0.0007900816572008159 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 90720 4816 REQVTATPRIA True H1975_Epitope_Rep2 1240.6887835693599 1240.68712490379 23.614 3 0.20822630696968267 0.00039635354736424893 0.0007901458606979151 ['nc|ENSG00000169607|Q8IYA6-2|CKAP2L', 'nc|ENSG00000169607|Q8IYA6-3|CKAP2L', 'ENSG00000169607|ENST00000302450|CKAP2L'] 20049 12956 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep3 1154.4801561928198 1154.47904993586 55.066 2 0.20822484438342886 0.00039635354736424893 0.0007901724605728062 ['ENSG00000182195|ENST00000370526|LDOC1'] 43685 15736 IHDGMNLEL True PC9_epitope_Rep4 1040.49608066004 1040.49498993586 68.453 2 0.20822416414952902 0.00039635354736424893 0.0007901848322084776 ['ENSG00000198258|ENST00000586895|UBL5'] 2402 7926 AEQEPTAEQLA True H1975_Epitope_Rep2 1185.55134660669 1185.5502499358602 35.433 2 0.20821916275667743 0.00039635354736424893 0.0007902758001374399 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 24583 20478 FAIDEVLEKV True PC9_epitope_Rep4 1161.62814037541 1161.6270499358602 86.915 2 0.20820763439246592 0.00039635354736424893 0.0007904855240289062 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF', 'DDX60L|p.V1147I|1|0.13|ENSG00000181381|chr4:168400878-168400878|C/T|missense_variant'] 126221 7326 VLGM[Oxidation]DPLPSK True H1975_Epitope_Rep1 1071.56343232431 1071.5623299358601 33.188 2 0.20819524536370715 0.00039635354736424893 0.0007907109673643839 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 90234 10297 REEDPYMDTTL True H1975_Epitope_Rep2 1368.5867461392397 1368.5856499358601 44.613 2 0.20819144893795183 0.00039635354736424893 0.000790780063888883 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 99438 17414 SIAGIFKEV True PC9_epitope_Rep6 962.54368247546 962.54258993586 79.599 2 0.20818571315343354 0.00039635354736424893 0.0007908844690370443 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 108414 13253 SYLNSVQRL True PC9_epitope_Rep4 1078.5771078620598 1078.5760099358602 58.876 2 0.20816931234550418 0.00039635354736424893 0.0007911830797082761 ['nc|ENSG00000136243|O15504-2|NUP42', 'ENSG00000136243|ENST00000258742|NUP42'] 86073 16205 QHSITPLAL True PC9_epitope_Rep1 978.5498304850599 978.54872993586 67.149 2 0.2081686395949555 0.00039635354736424893 0.0007911953309397517 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 91370 19183 RHDDYLVML True PC9_epitope_Rep3 1160.5648289262 1160.56318490379 79.005 3 0.208167468512746 0.00039635354736424893 0.0007912166575736268 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 45405 6096 IQETQAELPR True H1975_Epitope_Rep1 1183.6197009500297 1183.6186099358601 28.517 2 0.20816049065210818 0.00039635354736424893 0.000791343743681822 ['ENSG00000076003|ENST00000264156|MCM6'] 62207 7253 LLESGTLGTK True NCI_RA007_Epitope_Rep2 1017.5706254992899 1017.56952993586 32.832 2 0.20815532223584296 0.00039635354736424893 0.0007914378880129794 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1', 'ENST00000490869.1_1_X:47063082-47065999:+|nuORF'] 16371 6084 EEIQETQTP True H1975_Epitope_Rep2 1073.48768372097 1073.4865899358601 28.377 2 0.20815431800416206 0.00039635354736424893 0.0007914561817131667 ['ENSG00000155438|ENST00000285814|NIFK'] 89007 9003 QVISQAAVVHA True PC9_epitope_Rep6 1121.61930702721 1121.61820993586 44.657 2 0.20814659189083606 0.00039635354736424893 0.0007915969395187149 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 142599 16050 YYLTPDGQRF True PC9_epitope_Rep2 1258.59823722946 1258.5971499358602 66.993 2 0.20814468855255627 0.00039635354736424893 0.0007916316192462635 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 29438 17832 FVEEEEHFL True PC9_epitope_Rep5 1177.52915461013 1177.52804993586 73.61 2 0.20814110845033773 0.00039635354736424893 0.000791696854538973 ['ENSG00000168159|ENST00000305943|RNF187'] 73346 7464 MTEGSTVNTEY True H1975_Epitope_Rep2 1230.50743318938 1230.50632993586 33.657 2 0.2081405133223876 0.00039635354736424893 0.0007917076992621429 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 103011 19123 SPFPDIPKV True PC9_epitope_Rep2 998.54368247546 998.54258993586 78.928 2 0.20813810385317555 0.00039635354736424893 0.0007917516073545357 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF', 'ENST00000446672.2_1_13:19955792-19968894:+|nuORF'] 45366 8215 IQDNHDGTYTV True PC9_epitope_Rep5 1261.55749461629 1261.5563899358601 36.538 2 0.20813289316066547 0.00039635354736424893 0.0007918465708826475 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 8871 22061 AVFPDDMPTL True PC9_epitope_Rep5 1104.51614739828 1104.5150499358601 89.885 2 0.20813221558515224 0.00039635354736424893 0.000791858920361245 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 70762 13672 LYADVGGKQF True PC9_epitope_Rep1 1096.55530978832 1096.5542099358602 57.444 2 0.2081188568410375 0.00039635354736424893 0.0007921024360406708 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 8224 8820 ATGDMSGLLK True NCI_RA007_Epitope_Rep4 991.5008316873099 991.49972993586 40.738 2 0.20811111190601053 0.00039635354736424893 0.0007922436523606264 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 137242 10256 YCAEIAHNV True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 44.436 2 0.20810975918192304 0.00039635354736424893 0.0007922683196795803 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000458542.1_1_3:25791186-25791384:+|nuORF'] 17587 19663 EHIGIGLLSL True PC9_epitope_Rep6 1050.60734536118 1050.6062499358602 88.292 2 0.20810948177623853 0.00039635354736424893 0.0007922733783484894 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 24362 19077 EYYRGFTLF True PC9_epitope_Rep6 1194.5709598524597 1194.5698699358602 86.025 2 0.20810792256261432 0.00039635354736424893 0.0007923018122024914 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 87903 9496 QRIIQQETL True PC9_epitope_Rep4 1127.62987171091 1127.6287699358602 44.138 2 0.20810471940220546 0.00039635354736424893 0.0007923602283180439 ['ENSG00000180182|ENST00000324817|MED14'] 55032 8785 KYSLIKGNF True NCI_RA007_Epitope_Rep2 1068.59678067748 1068.59568993586 38.818 2 0.20809102312203948 0.00039635354736424893 0.0007926100564572466 ['ENSG00000143546|ENST00000368733|S100A8'] 107271 20156 SVLDDKLVFV True PC9_epitope_Rep4 1133.63322575585 1133.6321299358601 85.667 2 0.20808909711759146 0.00039635354736424893 0.0007926451942385916 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 59317 16148 LFIATSQKF True PC9_epitope_Rep2 1053.58588164061 1053.58478993586 67.369 2 0.20808432028463814 0.00039635354736424893 0.0007927323489185708 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 35263 6028 GRDENSVEL True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 31.532 2 0.20806347241874776 0.00039635354736424893 0.0007931128367299227 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 38370 4596 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 22.783 2 0.20805965578892402 0.00039635354736424893 0.0007931825126716949 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 104128 4191 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 22.487 2 0.20805641490969023 0.00039635354736424893 0.0007932416825998922 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 78476 14781 NYNEKIYEL True PC9_epitope_Rep2 1184.5713537752797 1184.5702499358601 62.118 2 0.20804768338741592 0.00039635354736424893 0.0007934011192609251 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 42777 10055 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 43.668 2 0.208042258786891 0.00039635354736424893 0.0007935001880750447 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 118338 12529 TYMKDLYQL True NCI_RA007_Epitope_Rep5 1173.5739966275698 1173.57288993586 54.847 2 0.20803858734251474 0.00039635354736424893 0.0007935672462551674 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 90480 4680 RELEDATETA True H1975_Epitope_Rep2 1133.52004647841 1133.51894993586 23.098 2 0.2080373071411887 0.00039635354736424893 0.0007935906302071352 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 134842 19757 VYVDLGGSHVF True PC9_epitope_Rep5 1191.5924235730301 1191.5913299358601 81.038 2 0.20803612992948126 0.00039635354736424893 0.0007936121335773274 ['ENSG00000165733|ENST00000374518|BMS1'] 3506 14179 [Acetylation]-AGLNSLEAVKR True PC9_epitope_Rep2 1198.66698581192 1198.6658899358602 59.807 2 0.20802846008322018 0.00039635354736424893 0.0007937522480438366 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 27997 21376 FQLEHIMDL True PC9_epitope_Rep1 1144.5586809166 1144.55758993586 87.055 2 0.208027873752871 0.00039635354736424893 0.0007937629602787781 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 39894 19928 HPFDLGLYNEA True PC9_epitope_Rep1 1274.59315184902 1274.5920499358601 81.472 2 0.20802703210097653 0.00039635354736424893 0.0007937783374829185 ['ENSG00000106399|ENST00000223129|RPA3'] 45491 14068 IQLVEEELDR True PC9_epitope_Rep6 1242.6455813446998 1242.64448993586 65.984 2 0.20802638439476928 0.00039635354736424893 0.0007937901714512121 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 18865 10998 ELDRFMHYY True H1975_Epitope_Rep2 1272.55974354576 1272.55864993586 47.33 2 0.208019261557047 0.00039635354736424893 0.0007939203215057062 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF', 'ANKIB1|p.R604I|1|0.27|ENSG00000001629|chr7:92387856-92387856|G/T|missense_variant', 'ANKIB1|p.Q593P|1|0.23|ENSG00000001629|chr7:92387823-92387823|A/C|missense_variant'] 29001 12379 FTEEQAVLY True H1975_Epitope_Rep3 1098.5233409536997 1098.5222499358601 52.802 2 0.20801644736060487 0.00039635354736424893 0.0007939717490205007 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 29014 7291 FTENDKEYQEY True H1975_Epitope_Rep1 1464.6045043783597 1464.60340993586 33.056 2 0.2080160161818005 0.00039635354736424893 0.0007939796288134189 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 103175 12840 SPIENIQRVAA True PC9_epitope_Rep2 1196.6513354314802 1196.6502299358601 54.69 2 0.20801053207407827 0.00039635354736424893 0.0007940798577302178 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 58325 9333 LEMLTGQERVA True H1975_Epitope_Rep2 1245.6387221424502 1245.63762993586 40.86 2 0.20800325240528142 0.00039635354736424893 0.0007942129223748607 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 76494 17962 NQIEDNDDFQL True PC9_epitope_Rep6 1349.57353860325 1349.57244993586 81.72 2 0.20798556536334284 0.00039635354736424893 0.0007945363159959279 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 21248 20763 ERDPVLWSL True PC9_epitope_Rep5 1113.58185888933 1113.5807699358602 84.917 2 0.2079816772642853 0.00039635354736424893 0.0007946074245323027 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 23982 19776 EYMEHVYLI True PC9_epitope_Rep2 1195.5583465634297 1195.55724993586 81.455 2 0.20796092640155828 0.00039635354736424893 0.0007949870401926758 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 43197 21734 IFIDPGYQTF True PC9_epitope_Rep2 1199.58627556343 1199.5851699358602 89.076 2 0.207959843957065 0.00039635354736424893 0.0007950068473917496 ['ENSG00000121741|ENST00000610343|ZMYM2'] 44293 17774 ILDEAIYKV True PC9_epitope_Rep3 1062.5961119711399 1062.5950099358602 73.568 2 0.20795323996718823 0.00039635354736424893 0.0007951277017649515 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 6939 15605 AQIKPFYTV True PC9_epitope_Rep2 1065.5858816406098 1065.58478993586 65.303 2 0.20794921606901023 0.00039635354736424893 0.0007952013489653276 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 21586 5559 ERQPGAASL True PC9_epitope_Rep5 927.4773938207899 927.47628993586 26.388 2 0.20794466317281904 0.00039635354736424893 0.0007952846863778079 ['ENSG00000180921|ENST00000388913|FAM83H'] 88263 12401 QSDYFRALY True H1975_Epitope_Rep2 1161.5454733806098 1161.54436993586 52.787 2 0.20794330141192816 0.00039635354736424893 0.0007953096141103946 ['ENSG00000087448|ENST00000381271|KLHL42'] 112635 21720 TLFEDSFQQI True PC9_epitope_Rep2 1226.58191845898 1226.58082993586 89.024 2 0.2079354374210563 0.00039635354736424893 0.0007954535838367555 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'nc|ENSG00000289720|Q96J02-3|ITCH', 'POFUT1-ITCH|1|fusion', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'ENSG00000123124|ENST00000517970|WWP1', 'nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF'] 105603 11293 SSDNIMVQY True H1975_Epitope_Rep3 1055.45936079815 1055.45826993586 48.544 2 0.20793482914123587 0.00039635354736424893 0.0007954647209867083 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 113500 15021 TLTEEGVIKV True PC9_epitope_Rep5 1087.6124903112698 1087.6113899358602 62.782 2 0.20793222785742485 0.00039635354736424893 0.0007955123503185386 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 77525 8065 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 35.969 2 0.20793125136235258 0.00039635354736424893 0.0007955302306162629 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 557 9551 [Acetylation]-AAQGEPQVQFK True H1975_Epitope_Rep1 1243.6197012663295 1243.6186099358601 41.663 2 0.2079296154287176 0.00039635354736424893 0.0007955601865920118 ['ENSG00000132341|ENST00000543796|RAN'] 90598 11171 REMENIIATV True NCI_RA007_Epitope_Rep4 1174.60160835774 1174.6005099358601 49.843 2 0.20792825929184747 0.00039635354736424893 0.0007955850199994823 ['ENSG00000112249|ENST00000369162|ASCC3'] 72670 4401 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 22.049 2 0.2079272865937908 0.00039635354736424893 0.0007956028324026324 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 128394 15458 VPRPAVLDPAL True PC9_epitope_Rep6 1146.67609362734 1146.6749899358601 71.617 2 0.20792465238833469 0.00039635354736424893 0.0007956510729467771 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 71812 11848 MEHPYFYTV True H1975_Epitope_Rep2 1185.5164817514499 1185.5153899358602 50.651 2 0.20791560959618907 0.00039635354736424893 0.000795816697092348 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 95981 15261 RYLETILEI True NCI_RA007_Epitope_Rep5 1148.6441247927198 1148.64302993586 65.393 2 0.2079070090506795 0.00039635354736424893 0.0007959742533166266 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 23256 8503 EVPAVPETLK True NCI_RA007_Epitope_Rep5 1081.60192562757 1081.60082993586 39.389 2 0.20788462169875233 0.00039635354736424893 0.000796384521341969 ['ENSG00000147604|ENST00000352983|RPL7'] 25993 19615 FGFEITHEV True PC9_epitope_Rep1 1077.51311062317 1077.51200993586 80.276 2 0.2078818785469315 0.00039635354736424893 0.0007964348066123323 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 72673 4822 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 23.675 2 0.2078731685358613 0.00039635354736424893 0.0007965944926994224 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 73230 14311 MSDSYLPSYY True H1975_Epitope_Rep1 1224.5008912569601 1224.49978993586 60.234 2 0.20784267111856852 0.00039635354736424893 0.0007971538741103114 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 2647 8377 AESLGQYAA True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 37.175 1 0.2078249248787377 0.00039635354736424893 0.0007974795556959665 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 108812 6963 SYTSVKENF True NCI_RA007_Epitope_Rep3 1073.5029398622898 1073.50184993586 34.496 2 0.20782195683212634 0.00039635354736424893 0.0007975340387487225 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 95795 22355 RYILEPFFI True PC9_epitope_Rep2 1196.65938093404 1196.65828993586 91.478 2 0.20780937699145893 0.00039635354736424893 0.0007977650024955981 ['ENSG00000151012|ENST00000280612|SLC7A11'] 96005 18174 RYLNEFEEL True PC9_epitope_Rep4 1211.5822528121498 1211.5811499358601 77.972 2 0.2077973717830644 0.00039635354736424893 0.0007979854786623399 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 106901 11213 SVDPHGFISY True H1975_Epitope_Rep2 1120.5189242796 1120.5178299358602 48.172 2 0.2077953954448861 0.00039635354736424893 0.0007980217800569077 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant'] 47735 19455 IYDSVKVYF True PC9_epitope_Rep2 1132.5804619069997 1132.57936993586 80.215 2 0.20779104537486853 0.00039635354736424893 0.0007981016880121018 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 107582 13076 SVPIDLQKV True PC9_epitope_Rep6 997.58079626017 997.57968993586 61.902 2 0.20778957954487304 0.00039635354736424893 0.0007981286161632063 ['ENSG00000198056|ENST00000338193|PRIM1'] 133801 18995 VYFPDQHINF True PC9_epitope_Rep4 1278.6033226099 1278.6022299358601 81.157 2 0.2077853506389506 0.00039635354736424893 0.0007982063087369728 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 115756 6625 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 30.391 2 0.2077832179599854 0.00039635354736424893 0.000798245492745984 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 118043 16201 TYFDKNYNL True PC9_epitope_Rep5 1176.5451390274397 1176.5440499358601 67.308 2 0.2077747198847766 0.00039635354736424893 0.0007984016482355655 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 35699 16120 GTFATLSELH True PC9_epitope_Rep2 1074.53457434374 1074.53346993586 67.263 2 0.2077731563589878 0.00039635354736424893 0.0007984303819772791 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 52700 20285 KMDASLGNLFA True PC9_epitope_Rep3 1165.58014463717 1165.5790499358602 83.277 2 0.20777289369987775 0.00039635354736424893 0.0007984352091046633 ['ENSG00000196937|ENST00000359943|FAM3C'] 49511 21594 KFIDPIYQVW True PC9_epitope_Rep3 1307.69140933831 1307.6903099358601 88.356 2 0.2077634217518785 0.00039635354736424893 0.0007986093033464879 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 28911 12989 FTDHELQEWY True H1975_Epitope_Rep3 1366.58298108814 1366.58188993586 55.196 2 0.20776240144564614 0.00039635354736424893 0.0007986280588293366 ['ENSG00000115756|ENST00000307845|HPCAL1'] 107551 11128 SVPEFPLSPPK True NCI_RA007_Epitope_Rep3 1196.6441247927198 1196.64302993586 50.875 2 0.20775650693941392 0.00039635354736424893 0.0007987364215281027 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 76491 20062 NQIEDNDDFQL True PC9_epitope_Rep3 1349.57353860325 1349.57244993586 82.418 2 0.20775047314935335 0.00039635354736424893 0.0007988473600527034 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 118081 20102 TYGEIFEKF True PC9_epitope_Rep3 1132.54407639828 1132.54357496793 82.574 1 0.20774458406801286 0.00039635354736424893 0.0007989556528383449 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 52612 20760 KLLPQLTYL True PC9_epitope_Rep5 1087.66413196131 1087.66302993586 84.905 2 0.20774006033125572 0.00039635354736424893 0.000799038848658518 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 8581 9485 [Acetylation]-ATVQQLEGR True H1975_Epitope_Rep1 1042.54072266964 1042.5396299358601 41.404 2 0.20772109064105038 0.00039635354736424893 0.0007993878139406058 ['ENSG00000164687|ENST00000297258|FABP5'] 133546 17983 VWSDVTPLTF True NCI_RA007_Epitope_Rep4 1163.58627556343 1163.5851699358602 77.812 2 0.20769843050646764 0.00039635354736424893 0.0007998048688178238 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 7902 9755 ATALEYVYK True NCI_RA007_Epitope_Rep2 1056.54916177872 1056.5480699358602 42.566 2 0.20769615300454558 0.00039635354736424893 0.0007998467978179221 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 104075 17466 SQDSFYRVL True PC9_epitope_Rep1 1113.54547338061 1113.54436993586 71.98 2 0.2076880674919407 0.00039635354736424893 0.0007999956705893983 ['ENSG00000143179|ENST00000367879|UCK2', 'UCK2|p.S70L|1|0.15|ENSG00000143179|chr1:165890313-165890313|C/T|missense_variant'] 108401 17138 SYLKQLPHF True PC9_epitope_Rep3 1131.6076797143498 1131.60604490379 71.079 3 0.2076822504615014 0.00039635354736424893 0.0008001027926108189 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 68071 17234 LTDLVDDNYFY True H1975_Epitope_Rep3 1376.6136125100802 1376.61250993586 71.933 2 0.20767663865540656 0.00039635354736424893 0.0008002061490133194 ['ENSG00000174231|ENST00000304992|PRPF8'] 71420 12315 LYTEKFEEF True NCI_RA007_Epitope_Rep1 1204.5652057656796 1204.5641099358602 51.874 2 0.20767289176000828 0.00039635354736424893 0.0008002751655595846 ['ENSG00000084652|ENST00000373610|TXLNA'] 46031 13956 ISGLIYEETR True PC9_epitope_Rep1 1179.6135529404298 1179.61244993586 58.518 2 0.20766547734156443 0.00039635354736424893 0.0008004117542401634 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 11678 10270 DGTGVVEFVR True H1975_Epitope_Rep1 1077.5454733806098 1077.54436993586 44.448 2 0.20764944745340685 0.00039635354736424893 0.0008007071373530942 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 17980 4989 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 24.275 2 0.20764334381270064 0.00039635354736424893 0.0008008196380230117 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 71385 19188 LYSEVDVHF True PC9_epitope_Rep1 1107.52367530687 1107.52256993586 78.601 2 0.20763244672665007 0.00039635354736424893 0.0008010205296203488 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 137575 6146 YEENSHLTSV True H1975_Epitope_Rep3 1177.52513185885 1177.5240299358602 28.651 2 0.20762765075833314 0.00039635354736424893 0.0008011089609962491 ['ENSG00000157557|ENST00000360938|ETS2'] 53679 11339 KSDVEAIFSK True PC9_epitope_Rep3 1122.5920892198599 1122.59098993586 48.622 2 0.20761579239011083 0.00039635354736424893 0.0008013276558260415 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 26418 19622 FIAKSFYDL True PC9_epitope_Rep2 1102.5698972233 1102.5688099358601 80.861 2 0.20760965097045272 0.00039635354736424893 0.0008014409408785523 ['ENSG00000176153|ENST00000389614|GPX2'] 87935 20259 QRLETILSL True PC9_epitope_Rep5 1071.62880908175 1071.6277099358601 82.975 2 0.20760923386267047 0.00039635354736424893 0.0008014486354602111 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 98360 10688 SEYLRYEDTL True H1975_Epitope_Rep1 1287.59829679911 1287.5971899358601 46.07 2 0.20759827320220473 0.00039635354736424893 0.0008016508584350808 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 62642 11182 LLLEPYNKY True H1975_Epitope_Rep3 1151.62266107215 1151.6215699358602 48.109 2 0.2075933021255798 0.00039635354736424893 0.0008017425911210388 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 2388 4553 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55606993586 22.633 2 0.20758591841480145 0.00039635354736424893 0.0008018788642656251 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 27867 20175 FQDPVPLTV True PC9_epitope_Rep4 1014.5385970950199 1014.53807496793 85.74 1 0.20758524138005754 0.00039635354736424893 0.0008018913607247712 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 75749 20813 NLLKLIAEV True PC9_epitope_Rep4 1011.6328318330299 1011.63172993586 88.207 2 0.20755568992089454 0.00039635354736424893 0.0008024370011316152 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 64489 13603 LPQLPITNFSR True H1975_Epitope_Rep1 1284.71902106848 1284.7179299358602 57.453 2 0.20755001112416613 0.00039635354736424893 0.0008025418975252106 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 12134 10948 DIDISSPEFK True H1975_Epitope_Rep1 1149.55536935797 1149.55426993586 47.075 2 0.20753951842437196 0.00039635354736424893 0.0008027357505434534 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 17017 6125 EGDLIAAQAR True H1975_Epitope_Rep3 1042.54072235334 1042.5396299358601 28.572 2 0.20753489125225758 0.00039635354736424893 0.0008028212526442171 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 111009 10236 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5294499358602 44.254 2 0.2075280582382041 0.00039635354736424893 0.0008029475315784772 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 100217 12733 SIWDETLYK True NCI_RA007_Epitope_Rep3 1153.5655401188499 1153.56444993586 57.32 2 0.20752180646700152 0.00039635354736424893 0.0008030630861889653 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000474757.1_1_X:55757854-55777647:+|nuORF'] 26840 11497 FLDASGAKLDY True H1975_Epitope_Rep2 1198.5870038394198 1198.5859099358602 49.281 2 0.20751784451827837 0.00039635354736424893 0.0008031363255025098 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 128934 9379 VQIEEVRQV True PC9_epitope_Rep6 1098.6033226098998 1098.6022299358601 46.272 2 0.2075120792901485 0.00039635354736424893 0.0008032429116302917 ['ENSG00000143621|ENST00000361891|ILF2'] 34930 5492 GQNPTNAEVLK True NCI_RA007_Epitope_Rep1 1169.6040508858898 1169.6029499358601 25.434 2 0.20750470711042482 0.00039635354736424893 0.0008033792273605396 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 118269 21222 TYLPAGQSVLL True PC9_epitope_Rep1 1160.64412479272 1160.64302993586 86.454 2 0.20748780064133818 0.00039635354736424893 0.0008036919250791829 ['ENSG00000167085|ENST00000300408|PHB1', 'nc|ENSG00000167085|P35232-2|PHB1'] 42635 3743 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 19.392 2 0.20747946132540715 0.00039635354736424893 0.0008038462118921195 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 121960 22555 VFTEVANLF True PC9_epitope_Rep5 1038.53859709502 1038.53750993586 91.761 2 0.20747544710696084 0.00039635354736424893 0.0008039204900841926 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 53990 6443 KVEAFQTTISK True NCI_RA007_Epitope_Rep2 1250.6870522338602 1250.6859499358602 29.67 2 0.20746643529530548 0.00039635354736424893 0.0008040872676931465 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000559359.1_1_14:24613399-24613677:-|nuORF', 'ENST00000453033.1_1_13:49345602-49345743:+|nuORF'] 141823 19520 YVDDTQFVRF True PC9_epitope_Rep2 1288.60880191316 1288.6077099358602 80.468 2 0.20746284849435462 0.00039635354736424893 0.0008041536566864138 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 111522 20989 TIAEGLTLAQV True PC9_epitope_Rep1 1114.62338934814 1114.6222899358602 85.56 2 0.20744184281319564 0.00039635354736424893 0.0008045425664885803 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 14421 4347 DTDSEEEIR True PC9_epitope_Rep4 1092.45711186868 1092.45600993586 23.161 2 0.20743643199879494 0.00039635354736424893 0.00080464277559941 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 26872 7725 FLDESRSTQY True H1975_Epitope_Rep3 1244.567331024 1244.56622993586 34.697 2 0.20743213168837013 0.00039635354736424893 0.0008047224269365469 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 92727 6659 RNVSTGDVNVE True PC9_epitope_Rep3 1188.5734790335998 1188.5723899358602 30.638 2 0.20742734542378097 0.00039635354736424893 0.000804811088529156 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 10115 7732 AYVEKVERL True PC9_epitope_Rep4 1105.6131590176099 1105.61206993586 37.131 2 0.20742028531502177 0.00039635354736424893 0.0008049418890928512 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 138502 14644 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 61.331 2 0.20741398282752352 0.00039635354736424893 0.0008050586714450994 ['ENSG00000115306|ENST00000356805|SPTBN1'] 28753 13280 FSSPHLVQV True PC9_epitope_Rep6 1012.5341804209198 1012.53308993586 62.735 2 0.2074089170461752 0.00039635354736424893 0.000805152550491184 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 76395 13431 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52897496793 56.523 1 0.20740682857981357 0.00039635354736424893 0.0008051912571410552 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 107134 17495 SVIDHIHLI True PC9_epitope_Rep4 1045.59202965021 1045.59092993586 75.297 2 0.2074031922659919 0.00039635354736424893 0.0008052586553197765 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 57856 10357 LEEYGPELHVA True H1975_Epitope_Rep2 1255.60846755999 1255.60736993586 44.846 2 0.20739508043706087 0.00039635354736424893 0.0008054090264605798 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14', 'SNX14|p.F372Lfs*45|1|0.19|ENSG00000135317|chr6:85543753-85543753|A/-|frameshift_variant'] 99028 19359 SHEEALSFVSL True PC9_epitope_Rep4 1217.5928174958499 1217.59172993586 82.574 2 0.20738582432928485 0.00039635354736424893 0.0008055806438135245 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 70854 18367 LYDPVISKL True PC9_epitope_Rep2 1046.6011973515801 1046.60010993586 75.979 2 0.20738029774265007 0.00039635354736424893 0.0008056831296618398 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 47919 9102 IYIKQIKTF True NCI_RA007_Epitope_Rep4 1152.6906810623198 1152.68958993586 41.849 2 0.2073744242973716 0.00039635354736424893 0.0008057920620452324 ['ENSG00000103479|ENST00000262133|RBL2'] 140535 19845 YRPETGSWVF True PC9_epitope_Rep1 1240.58767254576 1240.58656993586 81.15 2 0.20735517947653054 0.00039635354736424893 0.0008061490913799401 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 54783 18357 KYNDNFFGL True PC9_epitope_Rep6 1116.5240096600398 1116.52290993586 83.254 2 0.20735390811188628 0.00039635354736424893 0.0008061726832857241 ['ENSG00000012963|ENST00000013070|UBR7'] 91410 16025 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.60730993586 69.572 2 0.20734909820660846 0.00039635354736424893 0.0008062619439082898 ['ENSG00000079246|ENST00000392132|XRCC5'] 35615 9599 GTDDGRLLEY True H1975_Epitope_Rep1 1137.5302172392899 1137.52912993586 41.848 2 0.20734643322761917 0.00039635354736424893 0.0008063114039703527 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 4247 11675 AIDQLHLEY True H1975_Epitope_Rep3 1100.5502244078798 1100.54912993586 50.045 2 0.20734617114300818 0.00039635354736424893 0.000806316268233541 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 85827 14727 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.51274993586 61.646 2 0.20734326575797069 0.00039635354736424893 0.0008063701938504285 ['ENSG00000085872|ENST00000546361|CHERP'] 23983 20141 EYMEHVYLI True PC9_epitope_Rep3 1195.5583465634297 1195.55724993586 82.726 2 0.2073421891186946 0.00039635354736424893 0.0008063901778131827 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 88253 14045 QSDPWQQELY True H1975_Epitope_Rep1 1292.5673310240002 1292.56622993586 59.188 2 0.2073279991817944 0.00039635354736424893 0.0008066536097393183 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 138272 10007 YHADIYDKV True PC9_epitope_Rep5 1122.53457434374 1122.5329349037902 43.469 3 0.2073219687745168 0.00039635354736424893 0.0008067655885815781 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 108575 20237 SYNPLWLRI True PC9_epitope_Rep4 1160.6342288153598 1160.63312993586 85.983 2 0.20731937208736823 0.00039635354736424893 0.0008068138113583576 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 24954 14894 FDAGELITQR True PC9_epitope_Rep6 1148.5825871653199 1148.5814899358602 69.282 2 0.20730390921033873 0.00039635354736424893 0.0008071010305418229 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 15094 12918 DYTYEELLNR True H1975_Epitope_Rep1 1314.6091958359798 1314.60808993586 54.764 2 0.20729973989769393 0.00039635354736424893 0.0008071784920663542 ['ENSG00000125977|ENST00000374980|EIF2S2'] 35994 10189 GTVYEDLRY True H1975_Epitope_Rep2 1114.5294889632999 1114.52838993586 44.195 2 0.20729551422691955 0.00039635354736424893 0.0008072570082764817 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C'] 73678 13381 MYLKTVDKF True PC9_epitope_Rep5 1143.5998174525898 1143.59872993586 56.487 2 0.20727576503154016 0.00039635354736424893 0.0008076240650932036 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 65066 19296 LQLDPAQIYRV True PC9_epitope_Rep4 1314.7295857521801 1314.7284899358601 82.327 2 0.20725970036271693 0.00039635354736424893 0.0008079227651042874 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 30058 16644 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6171499358602 71.986 2 0.20724835590809104 0.00039635354736424893 0.0008081337661055105 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 8686 15831 AVALERTFVGA True PC9_epitope_Rep5 1132.62405805448 1132.62296993586 65.885 2 0.20724130493409795 0.00039635354736424893 0.000808264938438531 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 78294 19700 NYINDLRNF True PC9_epitope_Rep1 1167.56727145435 1167.5661699358602 80.601 2 0.2072299351182217 0.00039635354736424893 0.0008084765010538294 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 28925 12519 FTDLNNYDEY True H1975_Epitope_Rep2 1292.51971212524 1292.51860993586 53.248 2 0.20722740269665155 0.00039635354736424893 0.0008085236303773313 ['ENSG00000112902|ENST00000382496|SEMA5A'] 138568 5482 YIDENQDRY True H1975_Epitope_Rep2 1214.52038083158 1214.5192899358601 26.101 2 0.20721851616219647 0.00039635354736424893 0.0008086890339507621 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 103820 10369 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep1 1225.56488887629 1225.56378993586 44.833 2 0.20721542809932136 0.00039635354736424893 0.0008087465194933433 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 134279 16802 VYNPELDKW True PC9_epitope_Rep1 1162.5658744720197 1162.56476993586 69.453 2 0.20721508979818498 0.00039635354736424893 0.0008087528173553038 ['ENSG00000178502|ENST00000319121|KLHL11'] 32642 9727 GGNFGFGDSR True PC9_epitope_Rep2 1012.4362572847999 1012.43516993586 42.757 2 0.20720959338391906 0.00039635354736424893 0.0008088551462764261 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 4348 19754 AILELDEHL True PC9_epitope_Rep3 1051.55497543515 1051.5538699358601 81.212 2 0.207203008213194 0.00039635354736424893 0.0008089777621099897 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 82975 11589 PSEYDTPLY True H1975_Epitope_Rep3 1083.47605640811 1083.47547496793 49.707 1 0.2071987402395054 0.00039635354736424893 0.0008090572417092074 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 95798 22737 RYILEPFFI True PC9_epitope_Rep5 1196.65938093404 1196.65828993586 92.463 2 0.20716980225033266 0.00039635354736424893 0.0008095963410395928 ['ENSG00000151012|ENST00000280612|SLC7A11'] 44024 17382 IIIFVPVPQLK True NCI_RA007_Epitope_Rep2 1265.81113054817 1265.81002993586 72.355 2 0.20716606614439545 0.00039635354736424893 0.0008096659689640695 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 115588 6624 TRSTFSTNY True PC9_epitope_Rep6 1075.49343780775 1075.4923499358601 34.195 2 0.20716076881976908 0.00039635354736424893 0.0008097647028318693 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 139098 11267 YLDIPNPRY True H1975_Epitope_Rep1 1149.58185888933 1149.5807699358602 48.315 2 0.20715100588707025 0.00039635354736424893 0.0008099467003112419 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 131132 6956 VTEGSFVYK True NCI_RA007_Epitope_Rep3 1028.5178616504397 1028.51676993586 34.467 2 0.20714823486470377 0.00039635354736424893 0.0008099983643026207 ['ENSG00000057608|ENST00000380191|GDI2'] 70062 14364 LVNEVTEFAK True PC9_epitope_Rep3 1148.607739284 1148.60664993586 60.343 2 0.20714687970187956 0.00039635354736424893 0.000810023631675679 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB'] 14406 17194 DTDIVDEAIYY True H1975_Epitope_Rep1 1315.58197802863 1315.5808899358601 71.592 2 0.20714446794589222 0.00039635354736424893 0.0008100686014664101 ['ENSG00000111229|ENST00000228825|ARPC3'] 85888 15643 QHFEFEYQT True PC9_epitope_Rep1 1227.5196525555898 1227.5185499358602 64.992 2 0.20713548752110375 0.00039635354736424893 0.0008102360731954114 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 43433 8978 IGGIGTVPVGR True NCI_RA007_Epitope_Rep2 1024.6029286870798 1024.60182993586 39.535 2 0.2071289049551427 0.00039635354736424893 0.0008103588504388993 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 136437 18206 WVDPNSPVL True PC9_epitope_Rep6 1025.51819600361 1025.51767496793 82.669 1 0.20712659745438664 0.00039635354736424893 0.0008104018940884478 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 21469 16309 ERLGQFM[Oxidation]TL True PC9_epitope_Rep3 1109.55393026977 1109.55282993586 67.867 2 0.20712530563191472 0.00039635354736424893 0.0008104259924833775 ['ENSG00000113739|ENST00000265087|STC2'] 1385 5678 AEEEAATRIPA True H1975_Epitope_Rep3 1156.57241640444 1156.5713099358602 26.869 2 0.20712196462032598 0.00039635354736424893 0.0008104883209573982 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 130937 11230 VTDHLGVVYY True H1975_Epitope_Rep2 1164.58152453616 1164.5804299358601 48.238 2 0.20711862760378508 0.00039635354736424893 0.000810550579701575 ['nc|ENSG00000148719|Q9NXW2-2|DNAJB12', 'ENSG00000148719|ENST00000444643|DNAJB12', 'ENST00000473051.1_1_10:74095570-74096546:-|nuORF'] 87471 9124 QQDPQQYNV True PC9_epitope_Rep2 1118.49925146418 1118.49814993586 40.434 2 0.20711093199240793 0.00039635354736424893 0.0008106941750741299 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 53898 16202 KTMEDTLMTV True PC9_epitope_Rep4 1167.55154693083 1167.5504499358601 70.266 2 0.20710237927916259 0.00039635354736424893 0.000810853793381024 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 104783 19839 SQYEEQFVTL True PC9_epitope_Rep4 1242.5768330785397 1242.5757299358602 84.441 2 0.20710210546763125 0.00039635354736424893 0.0008108589040150193 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 108145 13802 SYFPEITHI True H1975_Epitope_Rep2 1105.54441075145 1105.5433099358602 58.236 2 0.2070921481528303 0.00039635354736424893 0.0008110447771331446 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 90574 7601 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 34.19 2 0.20707891893418348 0.00039635354736424893 0.000811291792972926 ['ENSG00000026025|ENST00000544301|VIM'] 5813 14693 APELLFFAK True NCI_RA007_Epitope_Rep4 1034.5800679841798 1034.5789699358602 63.933 2 0.2070703879889607 0.00039635354736424893 0.0008114511227212656 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 118632 17794 TYSPALNKMF True PC9_epitope_Rep2 1170.5743309807401 1170.5732299358601 73.735 2 0.20706990487542634 0.00039635354736424893 0.0008114601466180344 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 104974 12130 SRDKTIIM[Oxidation]W True PC9_epitope_Rep2 1164.59612943492 1164.59502993586 51.968 2 0.2070665458899797 0.00039635354736424893 0.0008115228906323839 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 29409 10605 FVDPYPVNKY True H1975_Epitope_Rep2 1240.6128246644398 1240.61172993586 45.816 2 0.20706556640128151 0.00039635354736424893 0.0008115411878630105 ['ENSG00000174010|ENST00000328046|KLHL15'] 108547 17651 SYNEHWNYL True PC9_epitope_Rep1 1224.5199869087598 1224.5188899358602 72.687 2 0.20706038965156567 0.00039635354736424893 0.0008116378984389963 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 24439 10315 FADLSEAANR True PC9_epitope_Rep1 1092.5199869087598 1092.5188899358602 44.561 2 0.20705468599763235 0.00039635354736424893 0.0008117444658769465 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 133601 17988 VYAALQRQLL True PC9_epitope_Rep3 1173.6869926642098 1173.6858899358601 74.395 2 0.20704055446507855 0.00039635354736424893 0.0008120085608165575 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 142830 8740 YYSPTKNEI True PC9_epitope_Rep4 1113.53423999057 1113.5331499358601 41.123 2 0.20702965182649236 0.00039635354736424893 0.0008122123719747769 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 26561 12254 FIIYDTHSL True NCI_RA007_Epitope_Rep3 1107.56006081559 1107.5589699358602 55.349 2 0.2070219909435667 0.00039635354736424893 0.0008123556132724487 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 73059 10021 MRDPQTEEF True PC9_epitope_Rep1 1151.49172355559 1151.4906299358602 43.412 2 0.20701193172951354 0.00039635354736424893 0.0008125437364575377 ['ENSG00000102241|ENST00000218364|HTATSF1'] 140539 19759 YRPETGSWVF True PC9_epitope_Rep5 1240.58767254576 1240.58656993586 81.046 2 0.20701137409541182 0.00039635354736424893 0.0008125541663740486 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 73674 13429 MYLKTVDKF True PC9_epitope_Rep1 1143.5998174525898 1143.59818490379 56.516 3 0.2070048454961701 0.00039635354736424893 0.0008126762864454142 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 78426 11095 NYLSHHLTI True PC9_epitope_Rep6 1096.5665431783602 1096.5654499358602 53.603 2 0.2070042242075987 0.00039635354736424893 0.0008126879088570891 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 106737 7188 STWEGIQAGK True NCI_RA007_Epitope_Rep5 1075.5298233164697 1075.5287299358602 34.327 2 0.2069871932915533 0.00039635354736424893 0.0008130065702218033 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 109407 5323 TDEGIAYR True NCI_RA007_Epitope_Rep2 923.4348603024698 923.43376993586 25.327 2 0.20698419284334194 0.00039635354736424893 0.0008130627238700124 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 126089 11760 VLELVSITANK True H1975_Epitope_Rep3 1185.69688864157 1185.6957899358601 50.378 2 0.20697350489554472 0.00039635354736424893 0.0008132627813540932 ['ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 95631 14806 RYALQMEQL True PC9_epitope_Rep6 1150.5804789903398 1150.57938993586 68.921 2 0.20697349905011142 0.00039635354736424893 0.0008132628907826835 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 13829 15555 DQLIYNLLK True NCI_RA007_Epitope_Rep1 1118.63356010902 1118.6324699358602 64.591 2 0.2069696006119664 0.00039635354736424893 0.0008133358742216156 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 28562 4795 FSETGGGEKY True H1975_Epitope_Rep2 1073.4665543535698 1073.46544993586 23.533 2 0.2069504427313864 0.00039635354736424893 0.0008136946282192159 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 107424 15431 SVLQLGNIVFK True NCI_RA007_Epitope_Rep4 1216.71795843932 1216.7168699358601 67.025 2 0.206948762387239 0.00039635354736424893 0.000813726102224125 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 113650 15016 TLVYHVVGV True PC9_epitope_Rep4 985.5596668927699 985.55856993586 65.696 2 0.2069414645698838 0.00039635354736424893 0.0008138628095471547 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 134340 9994 VYPDGIRHI True PC9_epitope_Rep1 1068.5716285587998 1068.5705299358601 43.308 2 0.20694141437623167 0.00039635354736424893 0.0008138637498861136 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 2453 8835 AEQKSNYFEV True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 38.99 2 0.20693397362301671 0.00039635354736424893 0.0008140031586560313 ['ENSG00000163840|ENST00000296161|DTX3L'] 38289 6269 HEFDEQVAA True H1975_Epitope_Rep3 1044.4512386426 1044.45014993586 29.121 2 0.20692949216297016 0.00039635354736424893 0.0008140871341376542 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF'] 22368 14759 ETEEDKFLLL True H1975_Epitope_Rep1 1235.6285342982299 1235.6274299358602 61.994 2 0.2069215321392418 0.00039635354736424893 0.0008142363138347885 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 88644 10789 QTELSQLLK True H1975_Epitope_Rep2 1058.5971746003 1058.5960699358602 46.527 2 0.20691829333432715 0.00039635354736424893 0.0008142970204894341 ['ENST00000380591.7_1_5:72801034-72801127:+|nuORF'] 44536 8714 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 43.374 3 0.20691728316775707 0.00039635354736424893 0.0008143159555111912 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 100170 11318 SITSVFITK True NCI_RA007_Epitope_Rep2 994.5698972233 994.56880993586 48.614 2 0.20691585806973517 0.00039635354736424893 0.0008143426689479302 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 62038 15112 LLDSDEPLVY True H1975_Epitope_Rep2 1162.57577044938 1162.5746699358601 63.282 2 0.2069125344755389 0.00039635354736424893 0.0008144049730770851 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 2377 11527 AEQDLIREL True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 49.325 2 0.20691222070644844 0.00039635354736424893 0.0008144108552425274 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 131006 13645 VTDPTGFLRM True H1975_Epitope_Rep3 1135.5695799534699 1135.56848993586 57.776 2 0.20690995662537778 0.00039635354736424893 0.0008144533007740226 ['ENSG00000100154|ENST00000397906|TTC28'] 43075 19115 IEVIEIMTDR True PC9_epitope_Rep4 1217.63257413285 1217.6314699358602 81.618 2 0.2069092798077886 0.00039635354736424893 0.0008144659897444511 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 104150 12690 SQESKVLYL True PC9_epitope_Rep4 1065.57062549929 1065.5695299358601 56.665 2 0.20689896919947917 0.00039635354736424893 0.0008146593174654527 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 76429 5191 NQELQEINR True H1975_Epitope_Rep3 1142.5679997303398 1142.5669099358602 25.064 2 0.20688980725509906 0.00039635354736424893 0.0008148311459392135 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 78121 20579 NWPSRPYLF True PC9_epitope_Rep1 1178.58727862294 1178.5861899358601 83.971 2 0.20688838615477628 0.00039635354736424893 0.0008148578013441406 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 26741 5456 FKDDYPSSPPK True NCI_RA007_Epitope_Rep2 1279.6084675599898 1279.60681490379 25.842 3 0.2068850143081524 0.00039635354736424893 0.00081492105015877 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000568209.5_1_16:1359737-1370175:+|nuORF', 'ENST00000568288.5_1_16:1359654-1370175:+|nuORF', 'ENST00000566159.1_1_16:1365264-1365732:+|nuORF'] 134578 20032 VYSFGFERL True PC9_epitope_Rep2 1116.56039516876 1116.55928993586 82.457 2 0.20688273734248724 0.00039635354736424893 0.0008149637640743684 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 141674 7220 YTTDRVM[Oxidation]TV True PC9_epitope_Rep1 1100.5172104078802 1100.5161099358602 32.586 2 0.20688259163521575 0.00039635354736424893 0.0008149664974937953 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 24090 19075 EYPDRIMNTF True PC9_epitope_Rep3 1284.5808729131597 1284.5797699358602 78.595 2 0.2068727320787917 0.00039635354736424893 0.000815151480825431 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 35926 4927 GTSITVPQK True NCI_RA007_Epitope_Rep4 929.5181960036099 929.51708993586 25.414 2 0.20686875563423068 0.00039635354736424893 0.0008152260981250406 ['nc|ENSG00000134851|Q9HC07-2|TMEM165', 'ENST00000508404.5_1_4:56269487-56291616:+|nuORF', 'ENSG00000134851|ENST00000381334|TMEM165'] 111915 20480 TIPEILPKL True PC9_epitope_Rep1 1022.6375828602999 1022.6364899358599 83.589 2 0.20684907940780692 0.00039635354736424893 0.0008155954199817967 ['ENSG00000121879|ENST00000263967|PIK3CA'] 30464 10822 GAFVHFHGV True PC9_epitope_Rep4 969.4820852784097 969.48098993586 49.388 2 0.2068466697265835 0.00039635354736424893 0.0008156406611209577 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 43728 11641 IHEPEPHIL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 49.773 2 0.2068265728693219 0.00039635354736424893 0.0008160180724584977 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 76447 15008 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.52857496793 62.983 1 0.20681946557211534 0.00039635354736424893 0.0008161515867252357 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 125217 17478 VIIKGLEEI True PC9_epitope_Rep4 1012.6168474157199 1012.61574993586 75.228 2 0.2068008066044037 0.00039635354736424893 0.0008165022094105946 ['ENSG00000138160|ENST00000260731|KIF11'] 28606 8137 FSHAQTVVL True NCI_RA007_Epitope_Rep5 1000.5341804209199 1000.53308993586 37.982 2 0.2067945420411859 0.00039635354736424893 0.0008166199613756543 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 108865 10102 TAAENEFVVLK True H1975_Epitope_Rep1 1219.64485306871 1219.6437499358601 43.795 2 0.20679332953956087 0.00039635354736424893 0.0008166427541498353 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'CON__Q6IME9'] 48387 6825 IYTSSVNRL True NCI_RA007_Epitope_Rep3 1051.56620882519 1051.5651099358602 33.954 2 0.20679164334144548 0.00039635354736424893 0.0008166744525973703 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 61887 13656 LLDDAQRLLY True H1975_Epitope_Rep2 1218.66083748602 1218.6597499358602 57.667 2 0.20678773478581647 0.00039635354736424893 0.0008167479333750537 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'ZNF671|p.G225Afs*5|1|0.13|ENSG00000083814|chr19:57721412-57721412|C/-|frameshift_variant', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 29026 6837 FTEPNRHFY True H1975_Epitope_Rep3 1209.5567067706497 1209.5550749037902 31.255 3 0.20677182407303782 0.00039635354736424893 0.000817047122954096 ['ENSG00000165355|ENST00000298097|FBXO33'] 134775 19206 VYTTTVHWL True PC9_epitope_Rep5 1118.5760452329 1118.57494993586 78.915 2 0.20677040672287675 0.00039635354736424893 0.0008170737805431292 ['ENSG00000174231|ENST00000304992|PRPF8'] 17832 9052 EHTNAIGTL True PC9_epitope_Rep5 954.4770594676199 954.47596993586 39.763 2 0.20676524381059438 0.00039635354736424893 0.0008171708922198179 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 28822 19725 FSWEGAFQHV True PC9_epitope_Rep4 1206.54580773378 1206.54470993586 83.995 2 0.20676390154614432 0.00039635354736424893 0.0008171961414075973 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 73069 14849 MRDPTFVRL True PC9_epitope_Rep5 1133.60154878809 1133.59990490379 62.118 3 0.2067566082630006 0.00039635354736424893 0.0008173333482277619 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 70830 9569 LYDAYELK True NCI_RA007_Epitope_Rep1 1013.50696261357 1013.50586993586 41.22 2 0.20675529684922472 0.00039635354736424893 0.0008173580219977517 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 118307 19643 TYLSIIHSL True PC9_epitope_Rep4 1045.58079626017 1045.5796899358602 83.675 2 0.2067549723345432 0.00039635354736424893 0.0008173641277379797 ['ENSG00000133030|ENST00000651222|MPRIP'] 27825 15231 FQDENHLYL True PC9_epitope_Rep4 1177.54038800017 1177.53928993586 66.515 2 0.20675343183249412 0.00039635354736424893 0.0008173931128915219 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 142579 19262 YYLQGGFNKF True PC9_epitope_Rep5 1235.5975089534697 1235.59640993586 79.132 2 0.20674991948705826 0.00039635354736424893 0.0008174592029114647 ['nc|ENSG00000164086|Q16829-2|DUSP7', 'ENSG00000164086|ENST00000495880|DUSP7'] 65847 9908 LSDLGRLSY True H1975_Epitope_Rep1 1022.53965972418 1022.53856993586 43.047 2 0.20674544294067765 0.00039635354736424893 0.0008175434435805766 ['ENSG00000083168|ENST00000265713|KAT6A', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF'] 41453 15668 HYKPTPLYF True PC9_epitope_Rep1 1164.59678067748 1164.59568993586 65.089 2 0.2067391701452818 0.00039635354736424893 0.0008176615011237276 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 114704 15329 TQIDHYVGI True PC9_epitope_Rep3 1044.52400966004 1044.52290993586 64.118 2 0.20673556388350176 0.00039635354736424893 0.0008177293807439152 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 54920 17340 KYPSPFFVF True NCI_RA007_Epitope_Rep1 1130.5800679841798 1130.5789699358602 71.582 2 0.20670480820597203 0.00039635354736424893 0.0008183085156748649 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 88525 5911 QTALPGNDRY True H1975_Epitope_Rep2 1133.5465360097699 1133.54542993586 27.723 2 0.2067043123601114 0.00039635354736424893 0.0008183178559108032 ['nc|ENSG00000155313|Q9UHP3|USP25', 'nc|ENSG00000155313|Q9UHP3-1|USP25', 'ENSG00000155313|ENST00000400183|USP25'] 105109 7236 SREPSQMEM True PC9_epitope_Rep5 1093.4532298718898 1093.45212993586 32.796 2 0.2067039755379572 0.00039635354736424893 0.0008183242006822017 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 48400 8519 IYTSSVNRL True PC9_epitope_Rep6 1051.56620882519 1051.5651099358602 42.513 2 0.20669389014176426 0.00039635354736424893 0.0008185142037240719 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 130263 9277 VSGGLEVLAEK True H1975_Epitope_Rep3 1100.607739284 1100.60664993586 40.678 2 0.2066873303016245 0.00039635354736424893 0.0008186378110777296 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF', 'nc|ENSG00000248546|O43423|ANP32CP'] 35566 10231 GSYDPQQIFK True NCI_RA007_Epitope_Rep4 1181.57168812845 1181.5705899358602 46.21 2 0.20668113870653176 0.00039635354736424893 0.0008187544967515755 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 29031 12957 FTEQWTDGY True H1975_Epitope_Rep3 1145.4665543535698 1145.46544993586 55.07 2 0.20668061067268687 0.00039635354736424893 0.000818764448753344 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 38274 7878 HEEMNYITA True H1975_Epitope_Rep2 1106.47025983502 1106.46916993586 35.249 2 0.20667587784925157 0.00039635354736424893 0.0008188536550205111 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 118682 20025 TYTDRVFFL True PC9_epitope_Rep4 1160.5866099165999 1160.58550993586 85.162 2 0.2066628827949764 0.00039635354736424893 0.0008190986414649371 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 134124 19901 VYLDHAGATLF True PC9_epitope_Rep1 1205.6080736371698 1205.6069699358602 81.367 2 0.20665508089876422 0.00039635354736424893 0.0008192457603433259 ['ENSG00000075643|ENST00000261326|MOCOS'] 95193 17390 RVIEGDVVSAL True PC9_epitope_Rep5 1156.6451874218799 1156.6440899358602 71.892 2 0.20665003539926652 0.00039635354736424893 0.0008193409164848037 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 124938 14579 VHSEQVFAL True PC9_epitope_Rep4 1028.5290950404797 1028.5279899358602 63.996 2 0.20664591187507464 0.00039635354736424893 0.0008194186927668124 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 41972 6363 IDEPLEGSEDR True H1975_Epitope_Rep1 1258.56772494682 1258.5666299358602 29.537 2 0.20664270425783232 0.00039635354736424893 0.0008194791986954644 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 67974 10587 LTDEGYEHFY True H1975_Epitope_Rep3 1272.52988288612 1272.52878993586 45.792 2 0.2066358651492107 0.00039635354736424893 0.0008196082211411815 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 65108 21565 LQMEPAAFQAL True PC9_epitope_Rep3 1217.61144476545 1217.61034993586 88.245 2 0.2066344354854784 0.00039635354736424893 0.0008196351948788719 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 24851 11327 FAYDGKDYL True NCI_RA007_Epitope_Rep3 1090.4971262058598 1090.4960299358602 51.668 2 0.2066291668153444 0.00039635354736424893 0.0008197346075689118 ['ENSG00000204592|ENST00000376630|HLA-E'] 104894 12770 SRDDNM[Oxidation]FQI True PC9_epitope_Rep1 1140.48697290876 1140.4858699358601 53.994 2 0.20662899015738903 0.00039635354736424893 0.0008197379410755206 ['ENSG00000113387|ENST00000265073|SUB1'] 58502 9907 LEQEIATYR True PC9_epitope_Rep1 1121.57168812845 1121.5705899358602 42.965 2 0.20662827170796724 0.00039635354736424893 0.0008197514982382415 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 78365 15155 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.6069699358602 63.436 2 0.20662397391237222 0.00039635354736424893 0.0008198326024706483 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 71813 11678 MEHPYFYTV True H1975_Epitope_Rep3 1185.5164817514499 1185.5153899358602 50.057 2 0.20658857119394228 0.00039635354736424893 0.0008205009978711722 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 84331 10430 PYTKVEESF True PC9_epitope_Rep4 1098.5233409536997 1098.5222499358601 47.829 2 0.20658191128405018 0.00039635354736424893 0.0008206267965544439 ['ENSG00000182858|ENST00000330817|ALG12'] 85876 17743 QHFDTIYSI True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 73.531 2 0.20656145192252973 0.00039635354736424893 0.0008210133733705596 ['ENSG00000010292|ENST00000315579|NCAPD2'] 120777 10291 VELDNM[Oxidation]PLR True PC9_epitope_Rep5 1101.54884488933 1101.54774993586 44.571 2 0.20655251378409847 0.00039635354736424893 0.0008211823155949263 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 73246 4043 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 20.631 2 0.20654948911776155 0.00039635354736424893 0.0008212394935459097 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 132510 18637 VVDPLNGWMY True H1975_Epitope_Rep2 1192.5586809166 1192.55758993586 77.347 2 0.2065447798655804 0.00039635354736424893 0.0008213285246671199 ['ENSG00000123384|ENST00000243077|LRP1'] 130932 6026 VTDGPGNYKY True H1975_Epitope_Rep3 1112.51383889916 1112.51274993586 28.194 2 0.20652825453748147 0.00039635354736424893 0.0008216410221070521 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 7602 17952 ASFNDTFVHV True PC9_epitope_Rep2 1135.5298233164701 1135.52927496793 74.358 1 0.20652182923833995 0.00039635354736424893 0.0008217625580690066 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 48097 7974 IYNGDM[Oxidation]EKI True PC9_epitope_Rep5 1097.50631137101 1097.5052099358602 35.611 2 0.20651927297204387 0.00039635354736424893 0.0008218109154286997 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 116723 11387 TVDGVVFHY True H1975_Epitope_Rep2 1035.50254593947 1035.5014499358601 48.85 2 0.2064976125168995 0.00039635354736424893 0.0008222207848303447 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant', 'nc|ENSG00000038427|P13611-4|VCAN'] 77642 19554 NTFTKLITV True PC9_epitope_Rep1 1035.59644632431 1035.5953499358602 80.039 2 0.20649510232185875 0.00039635354736424893 0.0008222682971878632 ['ENSG00000106615|ENST00000262187|RHEB'] 71917 6519 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep1 1282.5975859869 1282.59648993586 30.136 2 0.20649310127879694 0.00039635354736424893 0.0008223061744141119 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 17631 18079 EHIQNIMTL True PC9_epitope_Rep1 1097.55392988933 1097.55282993586 74.334 2 0.2064842201972787 0.00039635354736424893 0.0008224743032308039 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 28072 16440 FQTEGKLYL True PC9_epitope_Rep1 1097.5757108797297 1097.57460993586 68.061 2 0.2064762679676374 0.00039635354736424893 0.0008226248771031245 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 72899 19214 MPTLPPPSV True PC9_epitope_Rep3 937.49428975489 937.49318993586 79.126 2 0.20647121829419982 0.00039635354736424893 0.0008227205060105939 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 17759 20117 EHSIATLLL True PC9_epitope_Rep2 995.56514619603 995.56404993586 82.788 2 0.20646765791323482 0.00039635354736424893 0.0008227879379335037 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 24093 17723 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5797699358602 76.195 2 0.20646477353010537 0.00039635354736424893 0.0008228425708438328 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 140063 15054 YQITQINHGL True PC9_epitope_Rep1 1185.61422164677 1185.6131299358601 62.723 2 0.2064547048158047 0.00039635354736424893 0.0008230333102203033 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 6842 5982 AQFKGTQSL True NCI_RA007_Epitope_Rep4 978.51344497634 978.51234993586 29.63 2 0.2064442238707332 0.00039635354736424893 0.0008232319059139677 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 112432 8514 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.5120699358602 37.704 2 0.20643084081132307 0.00039635354736424893 0.000823485561510654 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 86841 14599 QLQGYLRSV True PC9_epitope_Rep1 1062.5821932425 1062.58108993586 60.978 2 0.20642342474891787 0.00039635354736424893 0.0008236261554856997 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 76726 14769 NQTPVTLQV True PC9_epitope_Rep6 998.5396597241801 998.53911496793 68.766 1 0.20641241340399308 0.00039635354736424893 0.0008238349533738774 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 110046 5261 TELDKIRQA True H1975_Epitope_Rep2 1072.58767254576 1072.58656993586 25.304 2 0.20640660652562146 0.00039635354736424893 0.0008239450851884145 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 137136 18128 YAVDAYFREA True PC9_epitope_Rep3 1203.55603806431 1203.5549499358601 74.93 2 0.20638344184175858 0.00039635354736424893 0.0008243845678225207 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 71872 5894 MELQRAPPA True H1975_Epitope_Rep2 1011.5171504577897 1011.51604993586 27.657 2 0.2063830594385181 0.00039635354736424893 0.0008243918247865679 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 68388 8070 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.51367496793 36.016 1 0.20637937003342324 0.00039635354736424893 0.0008244618428618038 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 85756 18022 QHDFTSQIF True PC9_epitope_Rep5 1121.51417325233 1121.5130699358601 74.339 2 0.20636597610358062 0.00039635354736424893 0.0008247160849850431 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 43766 18413 IHLIDPNTL True PC9_epitope_Rep2 1034.5760452329 1034.57494993586 76.156 2 0.20636103871946196 0.00039635354736424893 0.0008248098257125224 ['ENSG00000169251|ENST00000351193|NMD3', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 49506 15669 KFIDPIYQVW True NCI_RA007_Epitope_Rep3 1307.69140933831 1307.6903099358601 69.254 2 0.20635719776857767 0.00039635354736424893 0.0008248827570493777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 95860 15316 RYKLYQEMF True PC9_epitope_Rep4 1276.6274291827597 1276.6263299358602 66.845 2 0.2063508675196832 0.00039635354736424893 0.0008250029688792895 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 9213 3978 AVNAHSNILK True NCI_RA007_Epitope_Rep4 1065.59309227937 1065.59198993586 21.546 2 0.20634790965444108 0.00039635354736424893 0.0008250591449526216 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF', 'ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 31791 6070 GEIESKFNQA True H1975_Epitope_Rep2 1121.53530261973 1121.53477496793 28.325 1 0.20633893640587864 0.00039635354736424893 0.0008252295892673671 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 131641 5758 VTLTSEEEAR True NCI_RA007_Epitope_Rep1 1133.5564319871298 1133.55532993586 26.454 2 0.20633352857732884 0.00039635354736424893 0.0008253323264959609 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 115038 15464 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 64.634 2 0.20632986926519595 0.00039635354736424893 0.0008254018529135527 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 136862 7251 YADPVNAHY True H1975_Epitope_Rep2 1048.46140940348 1048.46030993586 32.825 2 0.20632928563198477 0.00039635354736424893 0.0008254129424059943 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 94914 17498 RTFDETVSTYV True PC9_epitope_Rep2 1316.62484590012 1316.6237499358601 72.563 2 0.20632473003776397 0.00039635354736424893 0.0008254995074342671 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 65106 21662 LQMEPAAFQAL True PC9_epitope_Rep1 1217.61144476545 1217.61034993586 88.152 2 0.2063235880387944 0.00039635354736424893 0.0008255212090327044 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 68376 9123 LTEQRALLY True H1975_Epitope_Rep3 1105.6131590176099 1105.61206993586 40.08 2 0.20632061851757388 0.00039635354736424893 0.000825577642022622 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2', 'TECPR2|p.N1004Efs*17|1|0.25|ENSG00000196663|chr14:102445878-102445879|-/G|frameshift_variant'] 22459 15242 ETEVYEGALLY True H1975_Epitope_Rep3 1285.6077988536497 1285.6067099358602 64.036 2 0.2063189297127343 0.00039635354736424893 0.0008256097379146518 ['nc|ENSG00000099910|Q53GT1-3|KLHL22', 'ENSG00000099910|ENST00000328879|KLHL22'] 139946 7390 YQAVTATLEEK True H1975_Epitope_Rep1 1251.63468230783 1251.63358993586 33.429 2 0.20631771398376694 0.00039635354736424893 0.0008256328437308598 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 86115 20853 QHVQEWWEL True PC9_epitope_Rep3 1253.5829215184897 1253.58182993586 85.484 2 0.20630992181280994 0.00039635354736424893 0.0008257809550297655 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1'] 8348 9336 ATLAAVLQR True NCI_RA007_Epitope_Rep4 941.56581490237 941.56470993586 42.767 2 0.20630023027796102 0.00039635354736424893 0.0008259652060701259 ['ENSG00000159399|ENST00000290573|HK2'] 41981 8131 IDEPLEGSEDR True PC9_epitope_Rep4 1258.56772494682 1258.5666299358602 38.731 2 0.20629946012234576 0.00039635354736424893 0.0008259798496860713 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 105608 9308 SSDPASQLSY True H1975_Epitope_Rep1 1053.46146897313 1053.4603699358602 40.71 2 0.2062783354924014 0.00039635354736424893 0.000826381611582063 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 2552 9634 AEQQALRLEV True H1975_Epitope_Rep1 1155.6247863304698 1155.62368993586 41.985 2 0.20625747359146146 0.00039635354736424893 0.0008267785691137436 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 115186 9389 TRDPQVNAF True PC9_epitope_Rep1 1046.5145076054998 1046.5134099358602 40.973 2 0.20625393732933986 0.00039635354736424893 0.0008268458756051755 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 116329 6787 TTESEVMKY True H1975_Epitope_Rep2 1086.4903265732598 1086.48922993586 31.022 2 0.2062468682110008 0.00039635354736424893 0.0008269804402389548 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 36635 21628 GVIDLIFEKA True PC9_epitope_Rep2 1103.62266107215 1103.6215699358602 88.667 2 0.20623017825662301 0.00039635354736424893 0.0008272982300498602 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 107425 15438 SVLQLGNIVFK True NCI_RA007_Epitope_Rep5 1216.71795843932 1216.7168699358601 66.084 2 0.20618668459357264 0.00039635354736424893 0.0008281269591687887 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 130876 4404 VTDALNATR True NCI_RA007_Epitope_Rep5 959.50360856863 959.50250993586 23.57 2 0.20618595910824067 0.00039635354736424893 0.000828140789639436 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 140205 13597 YQVDSRTYL True PC9_epitope_Rep5 1143.5560380643099 1143.5549499358601 57.326 2 0.20618492470792274 0.00039635354736424893 0.0008281605095886922 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000513152.1_1_5:40764586-40764871:-|nuORF'] 43958 12066 IIDYLTDHY True H1975_Epitope_Rep3 1151.54989005471 1151.5487899358602 51.574 2 0.2061757521601037 0.00039635354736424893 0.0008283353969051419 ['ENSG00000105865|ENST00000265720|DUS4L', 'nc|ENSG00000288558|O95620-2|DUS4L', 'ENST00000485825.1_1_7:107215546-107218002:+|nuORF'] 71247 22164 LYPLTNYTF True PC9_epitope_Rep1 1130.56481184286 1130.56370993586 90.071 2 0.20617267613312962 0.00039635354736424893 0.0008283940539103888 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 7884 6373 ATAGIIGVNR True NCI_RA007_Epitope_Rep3 970.5559784946599 970.55488993586 32.07 2 0.20614700821931695 0.00039635354736424893 0.0008288836798930678 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 138068 13930 YGEPSEVFINR True PC9_epitope_Rep4 1309.6302656337298 1309.62916993586 61.485 2 0.2061424912627194 0.00039635354736424893 0.0008289698727252847 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 90086 7346 REAEIYQTV True H1975_Epitope_Rep2 1107.5560380643099 1107.5549499358601 33.197 2 0.20613356645841177 0.00039635354736424893 0.0008291402028003676 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ACVR1C|p.W232L|1|0.29|ENSG00000123612|chr2:157550242-157550242|C/A|missense_variant', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 46758 4966 ITESEEVVSR True NCI_RA007_Epitope_Rep5 1147.57208205127 1147.57098993586 25.804 2 0.20612694637087714 0.00039635354736424893 0.0008292665699862736 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 54387 16185 KYFDKVVTL True PC9_epitope_Rep5 1111.62774645259 1111.62664993586 67.244 2 0.20612401748646156 0.00039635354736424893 0.0008293224840035881 ['ENSG00000166813|ENST00000394412|KIF7'] 142403 17990 YYEYNHDLF True PC9_epitope_Rep2 1262.5244035828598 1262.5233099358602 74.5 2 0.2061213311370666 0.00039635354736424893 0.0008293737712187087 ['ENSG00000151748|ENST00000324679|SAV1'] 48102 21708 IYNGKLFDLL True PC9_epitope_Rep3 1194.6648602373 1194.66376993586 88.793 2 0.2061195269513447 0.00039635354736424893 0.0008294082181372802 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 29082 20915 FTIFRTISV True PC9_epitope_Rep5 1082.6124307416198 1082.61132993586 85.504 2 0.2061138100377364 0.00039635354736424893 0.0008295173793821465 ['ENSG00000105447|ENST00000253237|GRWD1'] 107302 16005 SVLDSFLKY True NCI_RA007_Epitope_Rep4 1070.5648118428599 1070.56370993586 69.433 2 0.20611340941456446 0.00039635354736424893 0.0008295250295962619 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 134870 10163 VYVQHPITF True NCI_RA007_Epitope_Rep3 1102.5811306133398 1102.58002993586 47.063 2 0.20609953622237412 0.00039635354736424893 0.0008297899927615426 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 23590 23184 EWASRFWLW True PC9_epitope_Rep1 1279.61382772395 1279.6127299358602 93.972 2 0.206091721575847 0.00039635354736424893 0.0008299392815479777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 140730 13628 YSDAFLNDSY True H1975_Epitope_Rep2 1193.48768372097 1193.4871749679298 57.558 1 0.20608704729068705 0.00039635354736424893 0.0008300285906402984 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 104069 9540 SQDPYHETL True PC9_epitope_Rep1 1088.4774533904401 1088.47634993586 41.553 2 0.20608698752524496 0.00039635354736424893 0.0008300297326093815 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 90470 7036 RELAQQVQQVA True NCI_RA007_Epitope_Rep4 1268.68369818892 1268.68260993586 33.691 2 0.2060858367128865 0.00039635354736424893 0.0008300517220811672 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 92851 11720 RPFEDQTSL True PC9_epitope_Rep1 1091.52473793603 1091.52364993586 49.956 2 0.20608114479629128 0.00039635354736424893 0.000830141380249241 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 77163 10112 NRPVEVYQY True PC9_epitope_Rep2 1166.57202248162 1166.57092993586 44.232 2 0.20607923562995234 0.00039635354736424893 0.000830177865425272 ['ENST00000484499.5_1_X:48791963-48792283:-|nuORF', 'nc|ENSG00000068308|Q96G74-4|OTUD5', 'nc|ENSG00000068308|Q96G74-2|OTUD5', 'nc|ENSG00000068308|Q96G74-3|OTUD5', 'ENSG00000068308|ENST00000376488|OTUD5', 'nc|ENSG00000068308|Q96G74|OTUD5'] 3000 17968 AFIEKHWTF True PC9_epitope_Rep5 1177.59202965021 1177.59092993586 74.131 2 0.20607204946397914 0.00039635354736424893 0.000830315211271105 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 95178 17772 RVIDDSLVVGV True PC9_epitope_Rep4 1170.66083748602 1170.6597499358602 76.388 2 0.2060681168600472 0.00039635354736424893 0.0008303903829494134 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 138250 9516 YGVSGYPTLK True NCI_RA007_Epitope_Rep1 1083.5600608155898 1083.5589699358602 41.009 2 0.20606218002923898 0.00039635354736424893 0.0008305038783333802 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 73358 14078 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 59.305 2 0.20605083380651062 0.00039635354736424893 0.0008307208292525496 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 90594 9084 REMEENFAVEA True H1975_Epitope_Rep3 1323.57651580871 1323.57540993586 39.929 2 0.20604981482917026 0.00039635354736424893 0.0008307403158816111 ['ENSG00000026025|ENST00000544301|VIM'] 24117 13535 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep4 1300.57578791316 1300.57468993586 59.959 2 0.20604674270502685 0.00039635354736424893 0.0008307990690737465 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 48183 12105 IYPQVLHSL True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 53.559 2 0.20603722116159878 0.00039635354736424893 0.0008309811914080265 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 139568 10031 YLVLDEADR True NCI_RA007_Epitope_Rep1 1092.54513902744 1092.5440499358601 43.026 2 0.20603048965862597 0.00039635354736424893 0.0008311099716969304 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'ENST00000418231.2_1_X:73350641-73351442:+|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y', 'DDX3X|p.V422Kfs*13|1|0.5|ENSG00000215301|chrX:41345494-41345497|TGGG/-|frameshift_variant', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF', 'nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 27960 10585 FQESSVKEL True PC9_epitope_Rep5 1065.5342399905699 1065.5331499358601 45.703 2 0.20602971464162267 0.00039635354736424893 0.0008311247998214217 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 96573 9851 SAFGVIIEK True NCI_RA007_Epitope_Rep3 962.54368247546 962.54258993586 45.822 2 0.20602881725304395 0.00039635354736424893 0.0008311419695692483 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 111085 6007 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 28.494 2 0.20602507367050094 0.00039635354736424893 0.0008312135994228793 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 87587 21172 QQLPMFIRI True PC9_epitope_Rep1 1144.64268532408 1144.64158993586 86.271 2 0.20602120100349827 0.00039635354736424893 0.000831287705699939 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'VPS13B|p.I2411Rfs*23|1|0.19|ENSG00000132549|chr8:99766880-99766893|TCAATCTCGTGAAT/-|frameshift_variant', 'nc|ENSG00000132549|Q7Z7G8-3|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-4|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-5|VPS13B'] 118328 14519 TYMGHTGAVW True PC9_epitope_Rep5 1121.4964150132098 1121.4953099358602 60.846 2 0.20601631846472973 0.00039635354736424893 0.0008313811460469531 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 114082 4494 TPFQGQGHGA True PC9_epitope_Rep3 998.4569927293797 998.45588993586 22.38 2 0.2060085708150373 0.00039635354736424893 0.0008315294395247872 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 118157 15779 TYIPVPAKI True PC9_epitope_Rep4 1000.5957180483199 1000.59462993586 68.619 2 0.20600795935920696 0.00039635354736424893 0.000831541144192252 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 45247 18957 IPTPIVGV True PC9_epitope_Rep4 794.49019035062 794.4896449679301 81.006 1 0.20600405542620837 0.00039635354736424893 0.0008316158783228347 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 2364 5687 AEQAERYDDMA True H1975_Epitope_Rep3 1297.52448023585 1297.5233899358602 26.904 2 0.20600390397548482 0.00039635354736424893 0.0008316187777240628 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 27791 23237 FQAEIAQLMSL True PC9_epitope_Rep5 1249.63765951329 1249.63656993586 94.365 2 0.2060037960692633 0.00039635354736424893 0.0008316208435073133 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 54594 20067 KYITQGQLLQF True PC9_epitope_Rep5 1337.73433677945 1337.7332299358602 82.24 2 0.20600077162751199 0.00039635354736424893 0.0008316787462583182 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 78253 11961 NYIDKVRFL True NCI_RA007_Epitope_Rep1 1166.64479349906 1166.64368993586 50.512 2 0.20599927479216704 0.00039635354736424893 0.0008317074045747714 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 71336 16810 LYQKDFLRI True PC9_epitope_Rep5 1194.6760936273397 1194.6744449037901 69.667 3 0.20599785207135418 0.00039635354736424893 0.0008317346448172243 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-3|FRMD6'] 106540 14482 STLTEEGVIKV True PC9_epitope_Rep4 1174.64451871554 1174.64342993586 63.615 2 0.20598812157527613 0.00039635354736424893 0.0008319209745635464 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 20819 21138 EQIKDIFYI True PC9_epitope_Rep5 1167.6175756917098 1167.61646993586 86.366 2 0.20598673698099879 0.00039635354736424893 0.0008319474916299958 ['ENSG00000164902|ENST00000297540|PHAX'] 134881 14627 VYVQHPITF True PC9_epitope_Rep4 1102.5811306133398 1102.58002993586 64.192 2 0.20598520630811157 0.00039635354736424893 0.0008319768073086418 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 11781 15085 DHDPVDKIVL True PC9_epitope_Rep5 1149.60298825673 1149.60133490379 63.031 3 0.20597822646607028 0.00039635354736424893 0.0008321104994354222 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 62000 9500 LLDPSQKNLY True H1975_Epitope_Rep3 1189.63428838501 1189.6331899358602 41.547 2 0.2059760769035466 0.00039635354736424893 0.0008321516765676559 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 118961 10632 VADTVARVL True PC9_epitope_Rep6 942.5498304850598 942.54872993586 51.713 2 0.20596704509353517 0.00039635354736424893 0.0008323247127307772 ['ENSG00000145632|ENST00000274289|PLK2'] 7160 5508 AQYEDIAQK True NCI_RA007_Epitope_Rep1 1064.5138388991597 1064.51274993586 25.495 2 0.20596620275852334 0.00039635354736424893 0.0008323408524675439 ['ENSG00000167768|ENST00000252244|KRT1'] 90925 11523 REYQDLLNV True NCI_RA007_Epitope_Rep4 1148.5825871653199 1148.5814899358602 51.27 2 0.20595314083578697 0.00039635354736424893 0.0008325911683621695 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 134491 10901 VYPTKTFPNL True NCI_RA007_Epitope_Rep5 1178.6335601090198 1178.6324699358602 48.57 2 0.205947585585224 0.00039635354736424893 0.0008326976508821477 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 73315 9013 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 39.62 2 0.20594699448780085 0.00039635354736424893 0.000832708981785991 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 129310 21406 VQWENSFVSV True PC9_epitope_Rep5 1193.57168812845 1193.5705899358602 87.402 2 0.2059441463517644 0.00039635354736424893 0.0008327635806318376 ['ENSG00000174231|ENST00000304992|PRPF8'] 142558 19984 YYLNDLERI True PC9_epitope_Rep5 1197.6029882567298 1197.60188993586 81.922 2 0.20593128242904146 0.00039635354736424893 0.0008330102271239505 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 65019 18481 LQIEDFEARI True PC9_epitope_Rep6 1232.6401020414398 1232.63900993586 83.727 2 0.20592785089417065 0.00039635354736424893 0.0008330760340563673 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 25479 6971 FEERSGVVP True H1975_Epitope_Rep3 1018.5083595958997 1018.50726993586 31.775 2 0.20592773264720948 0.00039635354736424893 0.0008330783017846603 ['ENSG00000170584|ENST00000302764|NUDCD2', 'NUDCD2|p.T16Ifs*30|1|0.16|ENSG00000170584|chr5:163459926-163460004|TCCTGGGCGCGCGTGCCTGGCGGCACCTGAACTTCAATGAACACCTCCTCCAAGGTCTGGTACCACTGGCCCCACGGGG/-|frameshift_variant'] 72212 12900 M[Oxidation]HAETAFESL True PC9_epitope_Rep2 1150.4964749633 1150.49536993586 54.918 2 0.20592292817433971 0.00039635354736424893 0.0008331704467178837 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 24219 4865 EYSKQMQRF True NCI_RA007_Epitope_Rep3 1215.57064258263 1215.56899490379 26.122 3 0.2059222568324228 0.00039635354736424893 0.0008331833231913128 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 107270 20872 SVLDDKLVFV True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 85.727 2 0.20591288588886816 0.00039635354736424893 0.0008333630806211702 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 19488 8060 ELPDPQESIQR True H1975_Epitope_Rep1 1310.64664397386 1310.6455499358601 35.946 2 0.2059126280788969 0.00039635354736424893 0.0008333680265916451 ['CON__Q29443', 'CON__Q0IIK2'] 48273 12332 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65934993586 52.292 2 0.20591068988309327 0.00039635354736424893 0.0008334052109652232 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 68025 9258 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60664993586 40.522 2 0.2058805937976658 0.00039635354736424893 0.0008339828193264837 ['ENSG00000167658|ENST00000309311|EEF2'] 49926 18474 KILDLETQL True PC9_epitope_Rep4 1071.61757569171 1071.61646993586 79.131 2 0.20587905061476713 0.00039635354736424893 0.0008340124471332716 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 24488 7768 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.4923499358601 34.827 2 0.20587744526424817 0.00039635354736424893 0.0008340432696262697 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 28073 15610 FQTEGKLYL True PC9_epitope_Rep2 1097.5757108797297 1097.57460993586 65.322 2 0.20587189429391464 0.00039635354736424893 0.0008341498562438909 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 98150 4243 SESPKEPEQLR True NCI_RA007_Epitope_Rep1 1298.64664397386 1298.6449949037901 20.616 3 0.2058498137457942 0.00039635354736424893 0.0008345739698280576 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 74198 6739 NEFGEIQGDK True H1975_Epitope_Rep3 1135.51456717515 1135.51346993586 30.876 2 0.20584786678524017 0.00039635354736424893 0.0008346113765768717 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 75128 13560 NHYNMQYAL True PC9_epitope_Rep2 1152.50222866964 1152.50112993586 57.45 2 0.20584341379521878 0.00039635354736424893 0.0008346969377290947 ['ENSG00000241945|ENST00000291576|PWP2'] 21468 15243 ERLGQFM[Oxidation]TL True PC9_epitope_Rep2 1109.55393026977 1109.55282993586 63.902 2 0.20583927579547406 0.00039635354736424893 0.0008347764544459505 ['ENSG00000113739|ENST00000265087|STC2'] 24853 11363 FAYDGKDYL True NCI_RA007_Epitope_Rep4 1090.4971262058598 1090.4960299358602 50.622 2 0.20583907953896705 0.00039635354736424893 0.0008347802259430591 ['ENSG00000204592|ENST00000376630|HLA-E'] 14739 9633 DVNAAIATIK True NCI_RA007_Epitope_Rep2 1014.57095985246 1014.56986993586 42.086 2 0.20583458476511102 0.00039635354736424893 0.000834866607511017 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 5292 10405 ALQEMVHQV True PC9_epitope_Rep6 1053.52771514149 1053.52660993586 50.756 2 0.20583115150396702 0.00039635354736424893 0.0008349325947305491 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 38215 7381 HEAFLGREVA True H1975_Epitope_Rep2 1127.57235683479 1127.5712499358601 33.331 2 0.20581343834762342 0.00039635354736424893 0.0008352731244222751 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF'] 101695 10107 SLMHSFILK True NCI_RA007_Epitope_Rep5 1074.5895871220598 1074.58848993586 45.511 2 0.20581169468378488 0.00039635354736424893 0.0008353066533257635 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 26847 11979 FLDDGHTFNY True H1975_Epitope_Rep1 1227.51965255559 1227.5185499358602 51.084 2 0.2058093013795519 0.00039635354736424893 0.0008353526763595271 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 134805 23196 VYTVVDEMFL True PC9_epitope_Rep3 1214.5893123385397 1214.58820993586 94.493 2 0.20578554097663174 0.00039635354736424893 0.0008358097248564673 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 64562 5391 LPSEELNR True H1975_Epitope_Rep3 956.4927095317599 956.49160993586 25.801 2 0.205776255378668 0.00039635354736424893 0.0008359884081958361 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 133864 20494 VYGPLPQSF True PC9_epitope_Rep5 1006.5123823471798 1006.51128993586 83.869 2 0.2057726600772512 0.00039635354736424893 0.0008360576030946854 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 111090 6802 THDQAVQAL True PC9_epitope_Rep5 981.4879585044899 981.48686993586 31.135 2 0.20577061605465985 0.00039635354736424893 0.000836096944760226 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 53230 19665 KQFEPNDFYL True PC9_epitope_Rep2 1299.6135529404298 1299.61244993586 81.026 2 0.20576941215185626 0.00039635354736424893 0.0008361201173600945 ['ENSG00000101126|ENST00000621696|ADNP'] 61919 14205 LLDEVFFSEK True H1975_Epitope_Rep3 1225.6230549949698 1225.6219499358601 59.977 2 0.20576864365977296 0.00039635354736424893 0.0008361349095551497 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF', 'ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4'] 26193 21280 FHDHALMIIF True PC9_epitope_Rep1 1242.6219498795 1242.62029490379 86.679 3 0.20575325971942765 0.00039635354736424893 0.0008364310800634253 ['ENSG00000198712|ENST00000361739|MT-CO2'] 53887 15039 KTLEGEFSV True PC9_epitope_Rep3 1008.5127762699999 1008.51166993586 62.976 2 0.20575093335312494 0.00039635354736424893 0.000836475876258349 ['ENSG00000100811|ENST00000262238|YY1', 'YY2|p.A236Qfs*6|1|0.14|ENSG00000230797|chrX:21857189-21857189|G/-|frameshift_variant', 'ENSG00000230797|ENST00000429584|YY2'] 75142 15858 NHYNNIMAL True PC9_epitope_Rep5 1088.50731405008 1088.5062099358602 65.989 2 0.2057410212048564 0.00039635354736424893 0.0008366667702179061 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 90933 10083 REYQELMSV True H1975_Epitope_Rep2 1153.54375912845 1153.5426699358602 43.777 2 0.20572734600800946 0.00039635354736424893 0.0008369302069070405 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 114604 8031 TQDPTVTRL True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 36.253 2 0.20572224845259518 0.00039635354736424893 0.000837028426642618 ['ENSG00000130827|ENST00000369682|PLXNA3'] 95668 13562 RYFDPANGKF True PC9_epitope_Rep5 1213.5880068989297 1213.58635490379 57.188 3 0.2057181320558693 0.00039635354736424893 0.0008371077498435898 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 14328 4652 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 22.18 2 0.2057180107547998 0.00039635354736424893 0.0008371100874365274 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 32821 7510 GHLEKAVVL True PC9_epitope_Rep4 964.5705659296399 964.56946993586 36.254 2 0.2057095053439557 0.00039635354736424893 0.0008372740115377371 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 28495 11201 FSDVNMQEY True H1975_Epitope_Rep2 1131.4542754177098 1131.45377496793 48.124 1 0.2056970033676675 0.00039635354736424893 0.0008375150195745638 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 4150 8650 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 38.216 2 0.20569258114815683 0.00039635354736424893 0.0008376002859915086 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 85875 18653 QHFDTIYSI True PC9_epitope_Rep1 1122.53457434374 1122.53346993586 76.537 2 0.20568753813669227 0.00039635354736424893 0.0008376975327502039 ['ENSG00000010292|ENST00000315579|NCAPD2'] 18364 8418 EITALAPSTM[Oxidation]K True PC9_epitope_Rep4 1176.6060254122801 1176.6049299358601 39.845 2 0.20568415146957028 0.00039635354736424893 0.0008377628457995252 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77591 17447 NTDSLDWALY True H1975_Epitope_Rep2 1196.5349682665599 1196.5338699358601 72.402 2 0.20568332312999743 0.00039635354736424893 0.0008377788213927582 ['ENSG00000108561|ENST00000225698|C1QBP'] 85805 13588 QHDPYITSI True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 57.121 2 0.20568002012606812 0.00039635354736424893 0.0008378425271072509 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 115013 9259 TRAQIEDTL True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 40.953 2 0.20567850405550706 0.00039635354736424893 0.0008378717694982586 ['ENSG00000007080|ENST00000445755|CCDC124'] 113804 11164 TNAENEFVTIK True PC9_epitope_Rep6 1264.6299312805597 1264.62882993586 53.894 2 0.20567606544985137 0.00039635354736424893 0.0008379188081507528 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 39111 10151 HHYEGAVVI True PC9_epitope_Rep5 1023.5137793295098 1023.5126899358601 44.032 2 0.2056751645104972 0.00039635354736424893 0.0008379361871833964 ['ENSG00000163655|ENST00000496455|GMPS', 'GMPS|p.G20R|1|0.13|ENSG00000163655|chr3:155893548-155893548|G/C|missense_variant'] 76847 19004 NRDELELEL True PC9_epitope_Rep1 1129.5615173675699 1129.5604299358602 77.887 2 0.2056745696537563 0.00039635354736424893 0.0008379476621103322 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 53788 11596 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep2 1213.59004099497 1213.58894993586 49.671 2 0.20565637619596033 0.00039635354736424893 0.0008382986943493102 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 114640 8251 TQDTQPHYI True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 36.713 2 0.2056556270539681 0.00039635354736424893 0.0008383131517720517 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24875 17772 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.4960299358602 73.379 2 0.20565101595936125 0.00039635354736424893 0.0008384021451414284 ['ENSG00000204592|ENST00000376630|HLA-E'] 53997 18700 KVFDPVPVGV True PC9_epitope_Rep1 1055.60153170475 1055.6004299358601 76.719 2 0.20563663589640957 0.00039635354736424893 0.0008386797388602393 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 2424 10989 AEQFRLEQI True H1975_Epitope_Rep3 1132.5876725457597 1132.58656993586 47.357 2 0.20563053727536604 0.00039635354736424893 0.000838797494897408 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 42780 10046 IENGHIFTV True H1975_Epitope_Rep3 1028.52909504048 1028.5279899358602 43.678 2 0.20561838227718304 0.00039635354736424893 0.0008390322407693986 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 28800 12119 FSVEGQLEFR True H1975_Epitope_Rep1 1210.5982372294598 1210.5971499358602 51.631 2 0.20561566586905092 0.00039635354736424893 0.0008390847109618575 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 85752 18190 QHDFTSQIF True PC9_epitope_Rep3 1121.51417325233 1121.5130699358601 75.176 2 0.20560519937203017 0.00039635354736424893 0.0008392869127977788 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 118719 17542 TYTSYLDKF True PC9_epitope_Rep4 1136.5389910178399 1136.5378899358602 75.489 2 0.20560289011386307 0.00039635354736424893 0.0008393315318447804 ['ENSG00000069956|ENST00000261845|MAPK6'] 6831 18868 AQFEHTILL True PC9_epitope_Rep1 1070.5760452329 1070.57494993586 77.361 2 0.2056001765426758 0.00039635354736424893 0.000839383965991814 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 3427 10242 [Acetylation]-AGITTIEAVKR True NCI_RA007_Epitope_Rep2 1199.68738690333 1199.68628993586 44.432 2 0.20559735850580638 0.00039635354736424893 0.0008394384221998566 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 9981 11750 AYPHNLMTF True NCI_RA007_Epitope_Rep3 1092.50625142092 1092.5051499358601 53.329 2 0.20559550446331534 0.00039635354736424893 0.0008394742519546973 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 61404 11065 LITPAVVSER True PC9_epitope_Rep6 1083.62880908175 1083.6277099358601 53.48 2 0.2055931402760356 0.00039635354736424893 0.0008395199425884157 ['ENSG00000118181|ENST00000527673|RPS25'] 26843 12320 FLDDFESKY True H1975_Epitope_Rep1 1162.51825557326 1162.51714993586 52.416 2 0.20559240448471672 0.00039635354736424893 0.0008395341631094585 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2', 'nc|ENSG00000171475|Q8TF74-2|WIPF2'] 8152 5623 ATELTHEDY True H1975_Epitope_Rep3 1077.46146897313 1077.4603699358602 26.666 2 0.20559140616047641 0.00039635354736424893 0.0008395534579485723 ['ENSG00000165916|ENST00000298852|PSMC3'] 7447 4831 ASAIPAYSK True NCI_RA007_Epitope_Rep3 906.4810822189 906.47998993586 25.98 2 0.20558556667548222 0.00039635354736424893 0.0008396663279108223 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 40970 4689 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.6069699358602 23.131 2 0.20557498936003726 0.00039635354736424893 0.0008398708129835862 ['nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 66877 18759 LSNIFVIGK True PC9_epitope_Rep3 989.5909670210499 989.58986993586 77.376 2 0.20556104908258893 0.00039635354736424893 0.0008401403885416371 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 74002 14256 NDEELNKLLGK True PC9_epitope_Rep1 1271.6721304457099 1271.67049490379 59.66 3 0.20556063692311208 0.00039635354736424893 0.0008401483601573105 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 49903 20942 KIIDIFTTL True PC9_epitope_Rep4 1062.6324974798601 1062.6314099358601 88.713 2 0.20555313569881586 0.00039635354736424893 0.0008402934553071208 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 4412 18960 AIPVFLEKL True PC9_epitope_Rep6 1028.6270181766 1028.62592993586 85.575 2 0.20555045036892938 0.00039635354736424893 0.0008403454033831958 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 74615 7720 NGHVGISFVPK True NCI_RA007_Epitope_Rep1 1153.62439240765 1153.6227449037901 34.021 3 0.2055492045750379 0.00039635354736424893 0.0008403695045313088 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000466325.1_1_X:153581267-153581814:-|nuORF'] 71030 20934 LYIVEPLKF True PC9_epitope_Rep2 1120.6532329244399 1120.65212993586 85.97 2 0.20554919707656358 0.00039635354736424893 0.0008403696495990094 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 138421 17417 YHIDVGTQTF True PC9_epitope_Rep5 1179.5560380643099 1179.5549499358601 71.995 2 0.20553926421768293 0.00039635354736424893 0.0008405618356797372 ['ENSG00000118496|ENST00000237281|FBXO30'] 138350 13362 YHFEEVQKL True PC9_epitope_Rep3 1191.5924235730297 1191.5907749037901 56.43 3 0.20553052630954177 0.00039635354736424893 0.0008407309376867083 ['ENSG00000140848|ENST00000290776|CPNE2'] 100257 7840 SIYGEKFEDEN True H1975_Epitope_Rep1 1329.57247597409 1329.57136993586 35.107 2 0.20552949051260977 0.00039635354736424893 0.0008407509854033824 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 23865 22839 EYIQFVPLL True PC9_epitope_Rep4 1120.6168474157198 1120.61574993586 96.073 2 0.20549844897374606 0.00039635354736424893 0.0008413520129763768 ['ENSG00000179409|ENST00000319004|GEMIN4'] 18359 9437 EITALAPSTM[Oxidation]K True PC9_epitope_Rep1 1176.6060254122801 1176.6049299358601 41.156 2 0.2054983957543471 0.00039635354736424893 0.0008413530437825969 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 134909 9972 VYVVGTAHF True NCI_RA007_Epitope_Rep3 991.5127167003499 991.51160993586 46.308 2 0.20549821875385826 0.00039635354736424893 0.0008413564721131229 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 54807 16139 KYPDIISRI True PC9_epitope_Rep5 1103.63389446219 1103.63278993586 67.067 2 0.2054911258658596 0.00039635354736424893 0.0008414938661159944 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 77577 12858 NTDPSIVMTY True H1975_Epitope_Rep2 1139.51687567427 1139.51637496793 54.568 1 0.2054720081691282 0.00039635354736424893 0.0008418643008278421 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 106122 9569 STDKAEYTFY True H1975_Epitope_Rep2 1223.53463391339 1223.53352993586 41.781 2 0.20546481595104513 0.00039635354736424893 0.0008420037034300629 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 116247 19512 TTDFIFNLY True H1975_Epitope_Rep3 1132.54407639828 1132.5429699358601 81.768 2 0.2054632506670963 0.00039635354736424893 0.0008420340454911304 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 95674 19237 RYFDVGLHNF True PC9_epitope_Rep1 1266.6145559999397 1266.6134499358602 78.795 2 0.2054608249393871 0.00039635354736424893 0.0008420810688890413 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 96033 20313 RYLPTGSFPF True PC9_epitope_Rep2 1183.6025943339098 1183.6014899358602 83.557 2 0.20542400343198844 0.00039635354736424893 0.0008427951874759775 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 42120 15132 IDMNDIKAFY True H1975_Epitope_Rep2 1228.579810284 1228.5787099358602 63.361 2 0.20541732138460253 0.00039635354736424893 0.0008429248446214938 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 101352 21215 SLITLIEKV True PC9_epitope_Rep2 1014.6324974798599 1014.63140993586 87.062 2 0.20540973105764285 0.00039635354736424893 0.0008430721501194313 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'CPD|p.R370H|1|0.26|ENSG00000108582|chr17:30420955-30420955|G/A|missense_variant'] 127587 4658 VNTLIRPDGEK True NCI_RA007_Epitope_Rep5 1240.6775501793197 1240.67590490379 24.602 3 0.20539641799774427 0.00039635354736424893 0.0008433305790782192 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 8788 12114 AVDPRFLAY True H1975_Epitope_Rep1 1050.5498304850598 1050.5487299358601 51.61 2 0.20536579337005986 0.00039635354736424893 0.0008439253564509139 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 28362 13779 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62262993586 57.848 2 0.20536371658986038 0.00039635354736424893 0.0008439657059478421 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 116343 7943 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51807496793 35.5 1 0.20536108650806717 0.00039635354736424893 0.0008440168082478125 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 34929 4907 GQNPTNAEVLK True H1975_Epitope_Rep3 1169.6040508858898 1169.6029499358601 24.002 2 0.2053603870191666 0.00039635354736424893 0.000844030399789307 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 87304 10730 QPQPQPYAV True PC9_epitope_Rep4 1026.5134449763398 1026.5123499358601 49.029 2 0.20535222691807278 0.00039635354736424893 0.0008441889722820381 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 1145 5866 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 27.549 2 0.20535213250393722 0.00039635354736424893 0.0008441908071749637 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 12033 10225 DHSNLIRSL True PC9_epitope_Rep4 1053.5567067706502 1053.55560993586 47.008 2 0.20535033015231807 0.00039635354736424893 0.0008442258357715088 ['ENSG00000125124|ENST00000245157|BBS2'] 14735 9385 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 41.1 2 0.20534904051126873 0.00039635354736424893 0.0008442509007634331 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 89053 18006 QVLPHLLEV True PC9_epitope_Rep6 1046.6124307416198 1046.61132993586 81.888 2 0.20534838786312629 0.00039635354736424893 0.000844263585678578 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 38290 6019 HEFDEQVAA True NCI_RA007_Epitope_Rep3 1044.4512386426 1044.45014993586 30.655 2 0.20534547107641415 0.00039635354736424893 0.0008443202788864879 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF'] 29408 10495 FVDPYPVNKY True H1975_Epitope_Rep1 1240.6128246644398 1240.61172993586 45.323 2 0.20533862133127426 0.00039635354736424893 0.000844453431515443 ['ENSG00000174010|ENST00000328046|KLHL15'] 71388 18524 LYSEVSHLL True PC9_epitope_Rep2 1059.56006081559 1059.5589699358602 76.596 2 0.20533631187772955 0.00039635354736424893 0.0008444983298767986 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 115707 8133 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 39.096 2 0.2053287277755834 0.00039635354736424893 0.0008446457901535984 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 114924 11299 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 48.341 2 0.20532162055965483 0.00039635354736424893 0.0008447840016119954 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 71266 21330 LYPQFM[Oxidation]FHL True PC9_epitope_Rep5 1210.5845021220598 1210.5834099358601 87.102 2 0.20532136809321003 0.00039635354736424893 0.0008447889116528747 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 42517 12936 IEEMPLNVA True H1975_Epitope_Rep2 1014.5055827145799 1014.50448993586 54.872 2 0.20531591590598317 0.00039635354736424893 0.0008448949543609998 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000581621.1_1_17:7481648-7481801:+|nuORF'] 78405 10205 NYLNHWNHF True NCI_RA007_Epitope_Rep4 1243.55229009655 1243.55118993586 46.108 2 0.2053122380635858 0.00039635354736424893 0.0008449664943626455 ['ENSG00000167363|ENST00000300784|FN3K'] 70040 11101 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6222899358602 47.664 2 0.2053089145682592 0.00039635354736424893 0.0008450311469650571 ['CON__P02769'] 76711 16362 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53856993586 68.181 2 0.2052860787920096 0.00039635354736424893 0.0008454755099710055 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 8115 8770 ATEDPWKTNY True H1975_Epitope_Rep3 1223.54586730343 1223.5447699358601 38.74 2 0.2052839517537321 0.00039635354736424893 0.000845516912092106 ['ENSG00000139684|ENST00000378720|ESD'] 125931 16170 VLDDKLYVV True PC9_epitope_Rep6 1062.5961119711399 1062.5950099358602 74.552 2 0.2052812721447407 0.00039635354736424893 0.0008455690727205103 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 68333 16014 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.5222499358601 67.055 2 0.20526826351138233 0.00039635354736424893 0.0008458223415428752 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 103822 10609 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep1 1225.56488887629 1225.56378993586 45.762 2 0.20526773810771573 0.00039635354736424893 0.0008458325723764601 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 30249 20670 FYVPAEPKLAF True PC9_epitope_Rep2 1280.68051030144 1280.6794099358601 84.944 2 0.20526367566443407 0.00039635354736424893 0.0008459116818031887 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 25300 12525 FDQLLAEEK True PC9_epitope_Rep1 1091.5498900547097 1091.5487899358602 53.047 2 0.20525433586460756 0.00039635354736424893 0.0008460935872487519 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 118649 16211 TYSPALNKM[Oxidation]F True PC9_epitope_Rep2 1186.5692459807399 1186.5681499358602 67.603 2 0.20524881119211633 0.00039635354736424893 0.0008462012063115978 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 118088 20155 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 82.575 2 0.20524794158331788 0.00039635354736424893 0.0008462181472965518 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 21246 20772 ERDPVLWSL True PC9_epitope_Rep3 1113.58185888933 1113.5807699358602 85.171 2 0.20523761769462381 0.00039635354736424893 0.000846419294581594 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 58319 6968 LEM[Oxidation]ILNKPGLK True H1975_Epitope_Rep1 1270.7318946317398 1270.73023490379 31.843 3 0.20523234353483025 0.00039635354736424893 0.0008465220731016138 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'AKR1B1|p.V167L|1|0.09|ENSG00000085662|chr7:134449050-134449050|C/G|missense_variant', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF'] 54634 11452 KYLEETNSL True PC9_epitope_Rep5 1095.5448046742702 1095.54370993586 49.048 2 0.20522931664417685 0.00039635354736424893 0.0008465810643291153 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 138490 14652 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51257496793 61.181 1 0.2052288926190803 0.00039635354736424893 0.0008465893285052894 ['ENSG00000115306|ENST00000356805|SPTBN1'] 53412 9776 KQVSELSQL True PC9_epitope_Rep4 1030.56587447202 1030.56476993586 45.244 2 0.20522695421921466 0.00039635354736424893 0.000846627108615662 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 140244 19783 YQYPVIIHL True PC9_epitope_Rep4 1144.6280808057597 1144.6269899358601 84.222 2 0.2052268364782858 0.00039635354736424893 0.0008466294034831828 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 85890 14838 QHFEFEYQT True PC9_epitope_Rep2 1227.5196525555898 1227.5185499358602 62.339 2 0.2052258499687921 0.00039635354736424893 0.0008466486316095624 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 30232 19965 FYTVIPHNF True PC9_epitope_Rep3 1136.5654805492 1136.5643899358602 82.041 2 0.20522351739644737 0.00039635354736424893 0.0008466940976846107 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 29919 12698 FVYDEPGHAV True PC9_epitope_Rep1 1132.5189242795998 1132.5178299358602 53.715 2 0.2052199910462754 0.00039635354736424893 0.0008467628373094595 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 108433 21684 SYLPISPTF True PC9_epitope_Rep2 1023.52769805815 1023.5266099358599 88.884 2 0.20521998989203385 0.00039635354736424893 0.0008467628598101644 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 12477 10301 DKDDTQQIL True PC9_epitope_Rep1 1074.51931820242 1074.51822993586 44.507 2 0.20521844723526883 0.00039635354736424893 0.0008467929327897214 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 31558 6200 GEEEALQSQA True H1975_Epitope_Rep2 1060.46728262956 1060.46618993586 28.82 2 0.20521209158759876 0.00039635354736424893 0.0008469168428506883 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 23591 23093 EWASRFWLW True PC9_epitope_Rep3 1279.61382772395 1279.6127299358602 94.095 2 0.20521133851541856 0.00039635354736424893 0.000846931525992964 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 137166 9294 YAYDGKDYL True NCI_RA007_Epitope_Rep3 1106.4920408254197 1106.49094993586 43.663 2 0.2052093234282977 0.00039635354736424893 0.0008469708167241304 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 78400 22308 NYLLYVSNF True PC9_epitope_Rep2 1131.5600608155898 1131.5589699358602 91.286 2 0.20520554534486746 0.00039635354736424893 0.0008470444877770745 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 12034 11966 DHSNLIRSL True PC9_epitope_Rep5 1053.5567067706502 1053.55560993586 51.023 2 0.20520300398771274 0.00039635354736424893 0.0008470940467988079 ['ENSG00000125124|ENST00000245157|BBS2'] 122991 12306 VGIDIFTGK True H1975_Epitope_Rep1 948.52803241132 948.52692993586 52.362 2 0.2051997743361986 0.00039635354736424893 0.0008471570324499245 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 46025 9483 ISGLIYEETR True H1975_Epitope_Rep2 1179.6135529404298 1179.61244993586 41.445 2 0.20519668617170664 0.00039635354736424893 0.0008472172631713378 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 128731 8197 VPYEIQKGQA True PC9_epitope_Rep5 1131.59242357303 1131.5913299358601 36.469 2 0.2051908698104932 0.00039635354736424893 0.0008473307155643914 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 140714 6538 YSAPQHDYY True H1975_Epitope_Rep2 1142.46688870674 1142.4657899358601 30.059 2 0.20518637262070388 0.00039635354736424893 0.0008474184469974843 ['ENSG00000064195|ENST00000434704|DLX3'] 142850 17828 YYTDIMHTL True PC9_epitope_Rep6 1155.5270464351497 1155.5259499358601 81.207 2 0.20518007858243514 0.00039635354736424893 0.0008475412467520741 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 142873 11762 YYTPITPHL True NCI_RA007_Epitope_Rep4 1103.56514619603 1103.56404993586 52.214 2 0.20516178150798084 0.00039635354736424893 0.0008478983329698584 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 138153 20214 YGLPVVVKL True PC9_epitope_Rep2 986.6164534929 986.61534993586 83.17 2 0.20515646702473747 0.00039635354736424893 0.000848002078852694 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 78419 12273 NYLSHHLTI True PC9_epitope_Rep2 1096.5665431783602 1096.5654499358602 52.517 2 0.20515281166852392 0.00039635354736424893 0.000848073443728186 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 142461 17941 YYFPVKNVI True PC9_epitope_Rep6 1141.6171817688898 1141.6160899358601 81.637 2 0.2051502141232476 0.00039635354736424893 0.0008481241602297426 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 106234 8204 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.4870749679299 36.51 1 0.2051456183249344 0.00039635354736424893 0.0008482138996364524 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 62470 21213 LLIDELNKL True PC9_epitope_Rep1 1069.63831113629 1069.63720993586 86.423 2 0.2051429579220578 0.00039635354736424893 0.0008482658520857196 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 109777 10191 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.45037496793 44.204 1 0.20513705998676005 0.00039635354736424893 0.0008483810385738818 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 108573 20953 SYNPLWLRI True PC9_epitope_Rep2 1160.6342288153598 1160.63312993586 86.044 2 0.20512373222749197 0.00039635354736424893 0.0008486413870744703 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 95994 21685 RYLMDPDTFTF True PC9_epitope_Rep1 1404.6383877892797 1404.63728993586 88.239 2 0.20512102686033964 0.00039635354736424893 0.0008486942443226254 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 46642 8654 ITDLNSDQY True H1975_Epitope_Rep1 1067.47711903727 1067.4760299358602 38.217 2 0.20511082462907157 0.00039635354736424893 0.00084889360441486 ['ENSG00000156671|ENST00000542569|SAMD8', 'nc|ENSG00000156671|Q96LT4-2|SAMD8'] 133658 10998 VYANGIRNI True PC9_epitope_Rep5 1018.5559784946599 1018.55488993586 47.292 2 0.2051051855550717 0.00039635354736424893 0.0008490038167718224 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 11791 22426 DHEDFLSAIQL True PC9_epitope_Rep1 1286.61428121642 1286.6131899358602 91.081 2 0.2050900029405577 0.00039635354736424893 0.0008493006233163944 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 106404 3458 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 18.107 3 0.20507625261295354 0.00039635354736424893 0.0008495695197455674 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 28997 12467 FTEEQAVLY True H1975_Epitope_Rep2 1098.5233409536997 1098.5222499358601 53.043 2 0.20507496886758583 0.00039635354736424893 0.0008495946285633374 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 18377 12533 EITALAPSTMK True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 53.207 2 0.20506191340304222 0.00039635354736424893 0.0008498500231041091 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 4504 10028 AKDIGFIKLD True NCI_RA007_Epitope_Rep3 1118.63356010902 1118.6324699358602 46.537 2 0.2050572155156899 0.00039635354736424893 0.0008499419432914297 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000401543.2_1_9:90140306-90140387:+|nuORF', 'ENST00000496507.1_1_4:25680486-25680639:+|nuORF', 'ENST00000557367.2_1_14:50050387-50052826:-|nuORF'] 6930 16205 AQIKEMVEL True PC9_epitope_Rep3 1059.56343194387 1059.5623299358601 67.47 2 0.20504337313219317 0.00039635354736424893 0.0008502128452529396 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 94751 4138 RSIQVDGKTIK True NCI_RA007_Epitope_Rep4 1243.72483472491 1243.72318490379 22.207 3 0.20503662131594444 0.00039635354736424893 0.0008503450128986877 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B', 'ENST00000598706.1_1_19:8455252-8465174:+|nuORF'] 41393 21730 HYFDPQYFEF True PC9_epitope_Rep3 1391.58225281215 1391.5811499358601 88.878 2 0.20503443352771533 0.00039635354736424893 0.0008503878435469699 ['ENSG00000084623|ENST00000677711|EIF3I'] 142489 22089 YYIEGIENSVF True PC9_epitope_Rep2 1332.62378327096 1332.62268993586 90.438 2 0.20501351829424172 0.00039635354736424893 0.0008507974133568248 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 20721 11996 EQEPEPHLL True PC9_epitope_Rep4 1090.5294889632999 1090.52838993586 53.937 2 0.20500618834797232 0.00039635354736424893 0.0008509409978835632 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 137323 10575 YDGIILPGK True NCI_RA007_Epitope_Rep1 974.54368247546 974.54258993586 45.119 2 0.20500478374029887 0.00039635354736424893 0.0008509685151751007 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 100896 6737 SLEVENQSLR True H1975_Epitope_Rep1 1173.59896550545 1173.5978699358602 30.954 2 0.20500448506974692 0.00039635354736424893 0.000850974366464708 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF', 'ENST00000527741.5_1_8:144663279-144663534:-|nuORF'] 16528 11121 EELNADLFR True H1975_Epitope_Rep1 1105.5403880001697 1105.53928993586 47.742 2 0.20499788995750107 0.00039635354736424893 0.0008511035823626138 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 90712 7275 REQQLAEIEA True H1975_Epitope_Rep2 1185.5989655054498 1185.5978699358602 32.919 2 0.20498933853578907 0.00039635354736424893 0.0008512711569019999 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 40515 7732 HRDYETATL True PC9_epitope_Rep1 1104.51998690876 1104.5188899358602 34.562 2 0.20498086087720005 0.00039635354736424893 0.0008514373186393503 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 91048 20816 RFLDDLGLKF True PC9_epitope_Rep2 1222.6710082468996 1222.66990993586 85.511 2 0.2049790746376109 0.00039635354736424893 0.0008514723330063519 ['ENSG00000046604|ENST00000261590|DSG2'] 142739 15688 YYQHIVTTL True PC9_epitope_Rep3 1136.5866099166 1136.58550993586 65.487 2 0.20497361438479564 0.00039635354736424893 0.0008515793753619644 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 112637 21933 TLFEDSFQQI True PC9_epitope_Rep5 1226.58191845898 1226.58082993586 89.406 2 0.20495138772756527 0.00039635354736424893 0.0008520152442771854 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'nc|ENSG00000289720|Q96J02-3|ITCH', 'POFUT1-ITCH|1|fusion', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'ENSG00000123124|ENST00000517970|WWP1', 'nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF'] 4406 12092 AIPQLQGYLR True NCI_RA007_Epitope_Rep5 1157.6556925359298 1157.65458993586 53.168 2 0.20494597165258158 0.00039635354736424893 0.0008521214884263045 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 76382 15427 NQAKYIPEL True PC9_epitope_Rep5 1074.57095985246 1074.5698699358602 64.349 2 0.20493991921362445 0.00039635354736424893 0.00085224023149842 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 48443 14344 IYYTGKYQSL True PC9_epitope_Rep1 1234.6233893481399 1234.6222899358602 59.998 2 0.20493591804354597 0.00039635354736424893 0.0008523187397469097 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant', 'MYCBP2|p.K641Gfs*11|1|0.09|ENSG00000005810|chr13:77257813-77257814|-/TTTTTCTTTTTGTTCCT|frameshift_variant'] 40069 9736 HPTWALKEA True PC9_epitope_Rep5 1051.5450794577898 1051.54398993586 42.42 2 0.20492752771113806 0.00039635354736424893 0.0008524833927212052 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 90477 4816 RELDVEEAHAA True H1975_Epitope_Rep2 1238.58912909774 1238.58748490379 23.614 3 0.2049262691032891 0.00039635354736424893 0.0008525080945571201 ['ENSG00000110063|ENST00000263579|DCPS'] 134913 10337 VYVVGTAHF True NCI_RA007_Epitope_Rep5 991.5127167003499 991.51160993586 46.391 2 0.20491708520901633 0.00039635354736424893 0.000852688362306405 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 73227 14444 MSDPYMPSYY True H1975_Epitope_Rep2 1252.4780476374 1252.4769499358601 60.714 2 0.2049166463085921 0.00039635354736424893 0.0008526969783009245 ['ENSG00000185728|ENST00000539294|YTHDF3'] 76680 21567 NQSELAVLL True PC9_epitope_Rep1 985.5444107514498 985.54330993586 87.778 2 0.20491011390867925 0.00039635354736424893 0.0008528252252775049 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 87213 13824 QPITPGPSI True PC9_epitope_Rep4 908.4967322830399 908.49562993586 61.071 2 0.2049066226522872 0.00039635354736424893 0.000852893775106837 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 22319 6045 ETDNM[Oxidation]FNRY True H1975_Epitope_Rep2 1204.48188752832 1204.48078993586 28.231 2 0.2048939127549692 0.00039635354736424893 0.0008531433770243941 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 107101 12298 SVHKGFAFV True PC9_epitope_Rep5 990.5287011176598 990.52760993586 52.295 2 0.20489307424137862 0.00039635354736424893 0.0008531598466572544 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 95109 9597 RVDPAKGLFY True H1975_Epitope_Rep3 1164.6291434349198 1164.6280499358602 41.928 2 0.20489296525214726 0.00039635354736424893 0.0008531619873885239 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 140087 18471 YQLGELVKV True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 79.12 2 0.20488675653727367 0.00039635354736424893 0.0008532839458562796 ['ENSG00000130227|ENST00000252512|XPO7'] 120631 8975 VEIEDINDHTP True H1975_Epitope_Rep3 1280.5884603913998 1280.5873699358601 39.517 2 0.2048592134950635 0.00039635354736424893 0.0008538251877502049 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 13798 13534 DQIYDIFQK True H1975_Epitope_Rep3 1168.5764391557198 1168.57534993586 57.338 2 0.20485616119940853 0.00039635354736424893 0.0008538851888910333 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 78598 12977 NYSNIRFQF True NCI_RA007_Epitope_Rep5 1187.57235683479 1187.5712499358601 56.595 2 0.20484498523082703 0.00039635354736424893 0.0008541049189285734 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 53376 13037 KQTDVLQQL True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 55.427 2 0.20484382240842322 0.00039635354736424893 0.0008541277843662927 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 67994 11418 LTDFIREEY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 48.971 2 0.2048383191938879 0.00039635354736424893 0.0008542360064768755 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 78681 18351 NYYGKYIAL True PC9_epitope_Rep1 1103.56514619603 1103.56404993586 75.376 2 0.20483784556028528 0.00039635354736424893 0.0008542453212446677 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 17544 19271 EHGNFLITV True PC9_epitope_Rep3 1028.52909504048 1028.5279899358602 79.347 2 0.20482722678650203 0.00039635354736424893 0.0008544541832862756 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 115577 8526 TRSTFSTNY True PC9_epitope_Rep3 1075.49343780775 1075.4923499358601 37.751 2 0.20482480940430522 0.00039635354736424893 0.0008545017382481365 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 27129 22905 FLITILDHL True PC9_epitope_Rep1 1083.63283183303 1083.6317299358602 92.902 2 0.20482376481874112 0.00039635354736424893 0.0008545222882515292 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1', 'ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 24324 6077 EYVESQLQR True H1975_Epitope_Rep1 1150.56185172074 1150.56074993586 28.442 2 0.20479834028121466 0.00039635354736424893 0.0008550226149460769 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 29262 19162 FVADEELVHL True PC9_epitope_Rep4 1170.5920892198599 1170.59098993586 81.804 2 0.20477715596515744 0.00039635354736424893 0.0008554397231936026 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'ENST00000530673.1_2_11:64878667-64879056:+|nuORF', 'ENST00000533827.5_1_11:64876997-64879056:+|nuORF'] 36021 4649 GTYHGMTLK True NCI_RA007_Epitope_Rep4 1006.49060135678 1006.48950993586 24.299 2 0.2047696344995451 0.00039635354736424893 0.0008555878660605049 ['ENSG00000134371|ENST00000367435|CDC73'] 28104 12376 FQYDHEAFL True H1975_Epitope_Rep1 1168.5189242795998 1168.5178299358602 52.636 2 0.20476252594461433 0.00039635354736424893 0.0008557278998869973 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 43431 8883 IGGIGTVPVGR True NCI_RA007_Epitope_Rep1 1024.6029286870798 1024.60182993586 38.554 2 0.20474705488504033 0.00039635354736424893 0.0008560327489874103 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 118214 14832 TYKVISNEF True PC9_epitope_Rep1 1099.5549754351498 1099.5538699358601 61.87 2 0.2047390774522445 0.00039635354736424893 0.0008561899826727712 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 28466 13408 FSDPGQPMSF True H1975_Epitope_Rep2 1111.46444617859 1111.4633499358602 56.71 2 0.20473864482391319 0.00039635354736424893 0.0008561985105230612 ['nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4', 'ENST00000528363.5_1_11:2975753-2985939:-|nuORF'] 76717 15644 NQTPVTLQV True PC9_epitope_Rep4 998.5396597241801 998.53911496793 68.102 1 0.2047375141982683 0.00039635354736424893 0.0008562207975060665 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 134186 21950 VYLPPEAFTF True PC9_epitope_Rep4 1182.5961119711399 1182.5950099358602 92.64 2 0.2047289281105665 0.00039635354736424893 0.0008563900661422949 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 40229 12980 HQIEAVDGEEL True PC9_epitope_Rep3 1238.5778957076998 1238.57678993586 54.955 2 0.20472875965347878 0.00039635354736424893 0.0008563933874901439 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 4238 21044 AIDPHLLLSV True PC9_epitope_Rep3 1076.6229954253201 1076.62188993586 86.225 2 0.20472672903061087 0.00039635354736424893 0.0008564334248446721 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 2389 4432 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55657496793 22.17 1 0.2047034273212312 0.00039635354736424893 0.0008568929940460074 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 135102 7186 WEEEAGRYAA True H1975_Epitope_Rep3 1180.5149015283198 1180.51380993586 32.616 2 0.20470096336765412 0.00039635354736424893 0.0008569416039599417 ['ENST00000529712.5_1_11:47736424-47736610:-|nuORF'] 127493 6962 VNLPINGNGKQ True NCI_RA007_Epitope_Rep4 1152.62512068364 1152.62402993586 33.405 2 0.20469892407244167 0.00039635354736424893 0.00085698183812675 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 37907 8749 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 38.491 2 0.20469232330758122 0.00039635354736424893 0.0008571120805597363 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 54711 15937 KYMDIEFDF True NCI_RA007_Epitope_Rep4 1206.5267120819797 1206.52560993586 69.17 2 0.20467623622544084 0.00039635354736424893 0.0008574295846230183 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF', 'ENSG00000166866|ENST00000300119|MYO1A'] 2478 3953 AEQLRM[Oxidation]EET True H1975_Epitope_Rep2 1121.5022886197298 1121.50118993586 20.27 2 0.20466400232040935 0.00039635354736424893 0.0008576711190977416 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 61723 10513 LLADPTGAFGK True H1975_Epitope_Rep3 1088.5866099165999 1088.58550993586 45.502 2 0.20465573643143578 0.00039635354736424893 0.0008578343515049184 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 46874 7425 ITLDNAYM[Oxidation]EK True H1975_Epitope_Rep1 1212.5696399035598 1212.5685499358601 33.564 2 0.20465242157064703 0.00039635354736424893 0.0008578998211796156 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 113743 7939 TMDNPTTTQY True H1975_Epitope_Rep2 1170.48630382198 1170.4852099358602 35.485 2 0.20465232925226054 0.00039635354736424893 0.0008579016445721785 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 137481 7620 YEEDSYSHIM[Oxidation]A True H1975_Epitope_Rep3 1359.52889729039 1359.52778993586 34.291 2 0.20464496033420287 0.00039635354736424893 0.0008580472015788007 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 53228 8561 KQFEKQVEL True PC9_epitope_Rep5 1147.6237237013097 1147.62208490379 37.872 3 0.20464202874923815 0.00039635354736424893 0.0008581051155739634 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 90926 11610 REYQDLLNV True NCI_RA007_Epitope_Rep4 1148.5825871653199 1148.5814899358602 51.612 2 0.20463746616215375 0.00039635354736424893 0.0008581952581129111 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 95760 13534 RYIANTVEL True PC9_epitope_Rep2 1077.58185888933 1077.5807699358602 57.352 2 0.2046340607873558 0.00039635354736424893 0.0008582625439240505 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 14408 17305 DTDIVDEAIYY True H1975_Epitope_Rep2 1315.58197802863 1315.5808899358601 71.857 2 0.20463249403922104 0.00039635354736424893 0.0008582935026224682 ['ENSG00000111229|ENST00000228825|ARPC3'] 2414 10007 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 43.481 2 0.2046249133254514 0.00039635354736424893 0.0008584433121645725 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 118368 14806 TYNPAFSRL True PC9_epitope_Rep3 1067.53999407735 1067.5388899358602 62.085 2 0.2046095113915114 0.00039635354736424893 0.0008587477649010935 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 8851 6805 AVFDGAQVTSK True NCI_RA007_Epitope_Rep4 1121.57168812845 1121.5705899358602 32.8 2 0.20460190517111 0.00039635354736424893 0.0008588981583447393 ['ENSG00000175274|ENST00000525680|TP53I11'] 24862 17087 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 70.975 2 0.20460081996405988 0.00039635354736424893 0.0008589196176761649 ['ENSG00000204592|ENST00000376630|HLA-E'] 9941 20866 AYMPHTFFI True PC9_epitope_Rep3 1125.53173789277 1125.53064993586 85.533 2 0.2045984110597283 0.00039635354736424893 0.0008589672542649561 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 73676 12096 MYLKTVDKF True PC9_epitope_Rep2 1143.5998174525898 1143.59818490379 51.836 3 0.20459320064058145 0.00039635354736424893 0.0008590703004624047 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 108684 13710 SYQRAFNEF True PC9_epitope_Rep2 1160.5250722892 1160.5239699358601 58.025 2 0.20459242647839582 0.00039635354736424893 0.0008590856120870037 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 74865 13697 NHHLFTTTI True PC9_epitope_Rep1 1082.5508931142201 1082.5497899358602 57.537 2 0.2045908956394368 0.00039635354736424893 0.0008591158903100093 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 114650 17576 TQEDVRLIGL True PC9_epitope_Rep4 1142.62953735774 1142.62844993586 75.623 2 0.2045878481228182 0.00039635354736424893 0.0008591761698483924 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 142346 19187 YYEHEFVEL True PC9_epitope_Rep1 1227.5448046742697 1227.54370993586 78.597 2 0.20458676456551964 0.00039635354736424893 0.0008591976035130793 ['nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 21184 5727 ERDM[Oxidation]SNVSL True PC9_epitope_Rep4 1065.47607387189 1065.4749699358601 28.853 2 0.20457874721872765 0.00039635354736424893 0.000859356209967594 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 21345 18676 ERFNVPVSL True PC9_epitope_Rep2 1059.5712942056298 1059.57018993586 77.204 2 0.2045762709421785 0.00039635354736424893 0.0008594052038608914 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 48140 20581 IYPHGLVLL True PC9_epitope_Rep1 1023.61170246563 1023.61060993586 83.979 2 0.20457486486279863 0.00039635354736424893 0.0008594330248210673 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 108304 20330 SYIRPEDIVNF True PC9_epitope_Rep2 1351.67721582615 1351.67610993586 83.622 2 0.20457227379355108 0.00039635354736424893 0.0008594842945874856 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 89449 16632 QYEQVKQLF True PC9_epitope_Rep5 1181.6080736371698 1181.6069699358602 68.981 2 0.20457000921193627 0.00039635354736424893 0.0008595291066202399 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 48160 12854 IYPPKLHQF True PC9_epitope_Rep3 1141.62841515893 1141.62676490379 54.461 3 0.20456925488768218 0.00039635354736424893 0.0008595440338726957 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 71091 21860 LYLGLFNRL True PC9_epitope_Rep1 1107.6440652230701 1107.64296993586 88.896 2 0.2045692345098784 0.00039635354736424893 0.0008595444371307639 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 99435 19766 SIAGIFKEV True PC9_epitope_Rep3 962.54368247546 962.54258993586 81.258 2 0.2045663355652023 0.00039635354736424893 0.0008596018065240372 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 72115 11321 M[Oxidation]FLSFPTTK True NCI_RA007_Epitope_Rep3 1086.54196860374 1086.5408699358602 51.643 2 0.20455217545434864 0.00039635354736424893 0.0008598820867941438 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 113061 10801 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 1189.6376598937302 1189.63656993586 46.617 2 0.20453898799109407 0.00039635354736424893 0.0008601431972546742 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 95244 12080 RVLQALEGLK True PC9_epitope_Rep4 1125.6869926642098 1125.6853349037901 54.27 3 0.204535977200989 0.00039635354736424893 0.0008602028217495535 ['ENSG00000105372|ENST00000598742|RPS19'] 24317 13747 EYVEKFYRI True PC9_epitope_Rep4 1245.6393737654498 1245.63826993586 60.774 2 0.20453348554002018 0.00039635354736424893 0.0008602521687516716 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 73249 4307 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 21.678 2 0.20453298129416322 0.00039635354736424893 0.0008602621556168344 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 11692 8508 DGYDYDGYR True NCI_RA007_Epitope_Rep1 1122.42541781758 1122.4243299358602 37.094 2 0.2045304344298857 0.00039635354736424893 0.0008603125994347768 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 85870 16176 QHFDSVMQL True PC9_epitope_Rep4 1103.5069796969099 1103.50588993586 70.165 2 0.20452965061353387 0.00039635354736424893 0.0008603281244905355 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 90082 2627 REAEHLYHTL True NCI_RA007_Epitope_Rep3 1267.6309343400699 1267.62928490379 14.794 3 0.20452160898499466 0.00039635354736424893 0.0008604874213131368 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 134579 20378 VYSFGFERL True PC9_epitope_Rep3 1116.56039516876 1116.55928993586 83.635 2 0.20451484482401097 0.00039635354736424893 0.00086062143565676 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 54803 16519 KYPDIISRI True PC9_epitope_Rep3 1103.63389446219 1103.63278993586 68.676 2 0.2045099208706816 0.00039635354736424893 0.0008607190042147416 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 95978 13844 RYLEQLHQL True PC9_epitope_Rep5 1198.64585612822 1198.64474993586 58.271 2 0.20450808787392405 0.00039635354736424893 0.0008607553280366529 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 73312 8564 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 37.894 2 0.2045025112974219 0.00039635354736424893 0.0008608658464550117 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 105171 17951 SRFPYYNSL True PC9_epitope_Rep5 1145.55055876105 1145.54946993586 74.064 2 0.20450238693620462 0.00039635354736424893 0.0008608683112485579 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 95957 8781 RYLEQLHQL True NCI_RA007_Epitope_Rep1 1198.64585612822 1198.64474993586 38.158 2 0.2044931718448367 0.00039635354736424893 0.0008610509706637548 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 8296 14685 ATIIDILTK True NCI_RA007_Epitope_Rep4 986.60119735158 986.6006449679301 63.901 1 0.20449007235468525 0.00039635354736424893 0.0008611124167786795 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 54316 14397 KYDEIFYNL True NCI_RA007_Epitope_Rep5 1203.5811901829898 1203.58008993586 62.061 2 0.20448161064893725 0.00039635354736424893 0.000861280189002534 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 47233 4787 IVAVTGAEAQK True H1975_Epitope_Rep3 1085.6080736371698 1085.6069699358602 23.539 2 0.20447970405771457 0.00039635354736424893 0.0008613179959594976 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 73263 16375 MSELPEEVLEY True H1975_Epitope_Rep2 1337.6060846014898 1337.6049899358602 68.207 2 0.20447489795320925 0.00039635354736424893 0.000861413306515854 ['ENSG00000037637|ENST00000375592|FBXO42', 'ENST00000478089.1_1_1:16621266-16641853:-|nuORF'] 49526 11435 KFIDTTSKF True PC9_epitope_Rep1 1085.57571087973 1085.57460993586 48.862 2 0.20447374657652187 0.00039635354736424893 0.0008614361412048005 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 70507 16320 LVVTNLDKL True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 70.737 2 0.20447338769426462 0.00039635354736424893 0.0008614432588646492 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 54365 12740 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.53333490379 53.88 3 0.20446750075678544 0.00039635354736424893 0.0008615600220636652 ['ENSG00000123975|ENST00000314355|CKS2'] 106126 7820 STDKFKTDFY True H1975_Epitope_Rep1 1250.58191845898 1250.58082993586 35.031 2 0.20446460902079677 0.00039635354736424893 0.0008616173833949204 ['ENSG00000168090|ENST00000303904|COPS6'] 24153 14560 EYQDLLNVK True PC9_epitope_Rep4 1120.5764391557198 1120.57534993586 63.92 2 0.2044630034923535 0.00039635354736424893 0.0008616492327862789 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 28170 8061 FRDQNPEQL True PC9_epitope_Rep4 1145.5465360097699 1145.54542993586 38.458 2 0.20445307020162481 0.00039635354736424893 0.0008618463089694662 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 77136 17789 NRPEFITEF True PC9_epitope_Rep4 1151.56112344475 1151.56002993586 76.453 2 0.20445277374570647 0.00039635354736424893 0.0008618521913405362 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 133600 16996 VYAALQRQLL True PC9_epitope_Rep2 1173.6869926642098 1173.6858899358601 70.624 2 0.2044520864506707 0.00039635354736424893 0.0008618658290185438 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 76540 20274 NQITQLESL True PC9_epitope_Rep1 1044.54513902744 1044.5440499358601 82.811 2 0.2044497186870451 0.00039635354736424893 0.0008619128131160793 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 4817 4869 ALEENNNFSK True NCI_RA007_Epitope_Rep2 1164.54111627616 1164.54000993586 23.562 2 0.20444590270498458 0.00039635354736424893 0.0008619885399636193 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2'] 75127 14615 NHYNMQYAL True PC9_epitope_Rep1 1152.50222866964 1152.50112993586 61.04 2 0.20444408744403658 0.00039635354736424893 0.0008620245655332041 ['ENSG00000241945|ENST00000291576|PWP2'] 134894 15140 VYVQNVVKL True PC9_epitope_Rep4 1060.6280808057597 1060.6269899358601 66.163 2 0.20444124781338088 0.00039635354736424893 0.0008620809237170397 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 86934 20254 QLVDIIEKV True PC9_epitope_Rep3 1055.62266107215 1055.6215699358602 83.167 2 0.20443150253241835 0.00039635354736424893 0.0008622743665331579 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 24616 19637 FAIPLIEKL True PC9_epitope_Rep6 1042.64266824074 1042.6415699358602 88.193 2 0.20442200959430454 0.00039635354736424893 0.0008624628422315445 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 66113 15619 LSELEAALQR True PC9_epitope_Rep3 1128.6138872935999 1128.61278993586 65.227 2 0.20441737069231994 0.00039635354736424893 0.0008625549594406653 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 87521 21214 QQHSILLLL True PC9_epitope_Rep5 1063.6389798426299 1063.6378899358601 86.647 2 0.20441283829207868 0.00039635354736424893 0.0008626449713178306 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 40036 10923 HPTEDLVVSA True PC9_epitope_Rep1 1066.5294889632999 1066.52838993586 46.901 2 0.20441210080468772 0.00039635354736424893 0.0008626596184496496 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 22242 12638 ESYSVYVYK True PC9_epitope_Rep2 1136.5389910178399 1136.5378899358602 53.922 2 0.20440463606309925 0.00039635354736424893 0.0008628078886585417 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 129212 7879 VQTEVNREL True PC9_epitope_Rep3 1086.56693710118 1086.5658499358601 35.291 2 0.2044038084864958 0.00039635354736424893 0.0008628243281699866 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 71225 20253 LYPEVFEKF True PC9_epitope_Rep2 1170.5961119711399 1170.5950099358602 83.324 2 0.20439067684917295 0.00039635354736424893 0.0008630852254688412 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 118155 16581 TYIPVPAKI True PC9_epitope_Rep2 1000.5957180483199 1000.59462993586 69.016 2 0.20438957381840725 0.00039635354736424893 0.0008631071439121979 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 40783 18958 HRWQQIEIL True PC9_epitope_Rep5 1221.66184054553 1221.66019490379 77.946 3 0.20438263167914156 0.00039635354736424893 0.0008632451047256197 ['ENSG00000167323|ENST00000526596|STIM1', 'nc|ENSG00000167323|Q13586-2|STIM1', 'nc|ENSG00000167323|Q13586|STIM1', 'ENST00000533343.1_1_11:4103494-4104733:+|nuORF'] 26008 14360 FGFVTFDDHD True NCI_RA007_Epitope_Rep5 1198.4931034545798 1198.49200993586 61.92 2 0.2043825337944065 0.00039635354736424893 0.000863247050142573 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 9286 9266 AVQEFGLARFK True NCI_RA007_Epitope_Rep3 1264.6928063206399 1264.69117490379 43.556 3 0.20438106870678996 0.00039635354736424893 0.0008632761686534614 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 127286 11101 VMAPRTVLL True NCI_RA007_Epitope_Rep4 998.5946725024999 998.59356993586 49.576 2 0.20437835874233326 0.00039635354736424893 0.0008633300315984099 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 103400 5897 SPPPPPPPP True NCI_RA007_Epitope_Rep3 881.4647038787699 881.46360993586 30.171 2 0.20437161941564574 0.00039635354736424893 0.0008634639963037387 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 105735 21347 SSFPRFYFV True PC9_epitope_Rep1 1148.5654805492 1148.5643899358602 86.942 2 0.2043664499996678 0.00039635354736424893 0.000863566768368335 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 107446 10830 SVLSPLLNK True NCI_RA007_Epitope_Rep5 969.5858816406101 969.58478993586 48.291 2 0.20436153689075617 0.00039635354736424893 0.0008636644562182151 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 8076 10143 ATDRWYDEY True H1975_Epitope_Rep1 1217.49891711101 1217.4978299358602 43.953 2 0.20435981586359192 0.00039635354736424893 0.0008636986781996483 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 141743 18209 YTYEELLNRV True PC9_epitope_Rep6 1298.65066672514 1298.6495699358602 82.682 2 0.20434856213560076 0.00039635354736424893 0.0008639224878987431 ['ENSG00000125977|ENST00000374980|EIF2S2'] 25468 20179 FEELNADLFR True PC9_epitope_Rep3 1252.6088019131598 1252.6077099358602 82.875 2 0.2043446508343014 0.00039635354736424893 0.0008640002879361993 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 8692 8028 AVALPLQTK True NCI_RA007_Epitope_Rep5 939.57531695691 939.57420993586 37.571 2 0.2043297728169769 0.00039635354736424893 0.0008642962920966988 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 70980 19106 LYHDIFSRL True PC9_epitope_Rep1 1162.61349337078 1162.6118549037901 78.28 3 0.2043292050990819 0.00039635354736424893 0.0008643075890878858 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 2468 4993 AEQLRDEEV True H1975_Epitope_Rep2 1087.51456717515 1087.51346993586 24.291 2 0.2043291485379989 0.00039635354736424893 0.0008643087146022777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 17591 8584 EHINEGETAM[Oxidation]L True PC9_epitope_Rep2 1258.5499670881397 1258.54886993586 38.379 2 0.20432494615227445 0.00039635354736424893 0.0008643923423895522 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 116705 13796 TVDEHVWFY True H1975_Epitope_Rep1 1194.53457434374 1194.53346993586 58.209 2 0.2043212051487686 0.00039635354736424893 0.0008644667954648084 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 108681 9376 SYQRAFNEF True NCI_RA007_Epitope_Rep3 1160.5250722892 1160.5239699358601 43.971 2 0.2043203672058607 0.00039635354736424893 0.000864483473001942 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 58167 16640 LEKSFYQF True PC9_epitope_Rep2 1060.5229470308798 1060.52184993586 69.251 2 0.20431787059212614 0.00039635354736424893 0.0008645331648974555 ['ENSG00000039123|ENST00000230640|MTREX'] 49213 6740 KENEGFTVTA True H1975_Epitope_Rep2 1094.52440358286 1094.5233099358602 30.84 2 0.2043170509295529 0.00039635354736424893 0.0008645494798547994 ['ENSG00000125730|ENST00000245907|C3'] 36864 22217 GVLKVFLENV True PC9_epitope_Rep5 1116.6542955536 1116.6531899358602 90.466 2 0.2043123354462239 0.00039635354736424893 0.000864643345097549 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 134416 19255 VYPHPGTWESF True PC9_epitope_Rep1 1318.59823722946 1318.5971499358602 78.864 2 0.20429358401848496 0.00039635354736424893 0.0008650167075263655 ['ENSG00000197165|ENST00000335715|SULT1A2'] 71750 12208 MEENPGIFA True H1975_Epitope_Rep3 1006.4429824580199 1006.44247496793 52.13 1 0.20429271526233583 0.00039635354736424893 0.0008650340093765278 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 59218 3739 LFEGQETGKK True NCI_RA007_Epitope_Rep2 1135.5873381925899 1135.58569490379 19.187 3 0.20429257168368362 0.00039635354736424893 0.0008650368688732532 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1'] 2380 2721 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 14.563 2 0.2042922026021888 0.00039635354736424893 0.0008650442195034276 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 37710 10477 GVYSFQFNK True NCI_RA007_Epitope_Rep4 1088.52909504048 1088.5279899358602 47.149 2 0.20428484055501475 0.00039635354736424893 0.0008651908551864945 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000525031.2_1_12:94817522-94817669:-|nuORF'] 28008 20147 FQLRSFDQL True PC9_epitope_Rep5 1152.5927579261997 1152.5916699358602 82.543 2 0.20428327882149036 0.00039635354736424893 0.0008652219646664817 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 44172 19031 IIVKDFETI True PC9_epitope_Rep5 1076.61176203528 1076.6106699358602 78.23 2 0.20427409971137087 0.00039635354736424893 0.0008654048337379483 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF', 'nc|ENSG00000138119|Q9NZM1-4|MYOF', 'MYOF|p.P169Qfs*17|1|0.41|ENSG00000138119|chr10:93409669-93409669|C/-|frameshift_variant'] 1841 5576 AEIDEEPVSKA True H1975_Epitope_Rep2 1186.5717476981001 1186.57064993586 26.452 2 0.20427054667304007 0.00039635354736424893 0.0008654756288734824 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000550343.1_1_12:57108115-57108487:-|nuORF', 'ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 9504 5665 AVVTQVNKV True PC9_epitope_Rep4 956.5654805492 956.56438993586 28.594 2 0.20426609796069622 0.00039635354736424893 0.0008655642787172972 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 118027 17624 TYEGIFKTL True PC9_epitope_Rep6 1070.56481184286 1070.56370993586 80.43 2 0.20425587645172993 0.00039635354736424893 0.000865767998042462 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 142690 7372 YYPTEDVPR True NCI_RA007_Epitope_Rep5 1138.5294889632999 1138.52838993586 35.036 2 0.2042535581787596 0.00039635354736424893 0.0008658142089679827 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 112139 18290 TIYKDFVYI True PC9_epitope_Rep6 1160.6117620352798 1160.6106699358602 82.995 2 0.2042487164211432 0.00039635354736424893 0.0008659107293526121 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 60512 7410 LHAQGDPAL True PC9_epitope_Rep5 920.4715801643599 920.47048993586 33.458 2 0.20423424936121692 0.00039635354736424893 0.0008661991943389795 ['ENSG00000257365|ENST00000246166|FNTB', 'nc|ENSG00000257365|P49356-2|FNTB'] 78394 19536 NYLHLDYNF True PC9_epitope_Rep4 1197.5454733806098 1197.54436993586 83.266 2 0.20423193052984667 0.00039635354736424893 0.0008662454394860016 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 37868 15735 GYPLWKVTF True NCI_RA007_Epitope_Rep5 1109.59096702105 1109.5898699358602 67.242 2 0.20422814349373355 0.00039635354736424893 0.0008663209708038394 ['ENSG00000198805|ENST00000361505|PNP'] 90561 8795 REMEENFAV True H1975_Epitope_Rep3 1123.49680893603 1123.49570993586 38.836 2 0.2042223351504868 0.00039635354736424893 0.0008664368293315716 ['ENSG00000026025|ENST00000544301|VIM'] 75063 13721 NHTVLPEAL True PC9_epitope_Rep2 992.5290950404799 992.52798993586 58.068 2 0.20421694626476594 0.00039635354736424893 0.0008665443348740058 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 77523 7865 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 35.198 2 0.2041991592436041 0.0004751158094785604 0.0008668992719129845 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 106179 8768 STDPREALQY True H1975_Epitope_Rep2 1178.5567663402999 1178.5556699358601 38.69 2 0.20419831645184464 0.0004751158094785604 0.0008669160932997933 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 108267 21458 SYIEHIFEI True PC9_epitope_Rep3 1149.57062549929 1149.5695299358601 87.83 2 0.20419485227751252 0.0004751158094785604 0.0008669852386298496 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 54834 16346 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 72.005 2 0.2041920306495453 0.0004751158094785604 0.0008670415627461031 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 87723 6526 QRAITGASL True PC9_epitope_Rep6 915.5137793295099 915.51268993586 33.775 2 0.20419122019284447 0.0004751158094785604 0.0008670577414104674 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 9142 19609 AVLDDKLYVV True PC9_epitope_Rep3 1133.63322575585 1133.6321299358601 80.663 2 0.20417295450940862 0.0004751158094785604 0.0008674224486935581 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 39898 19845 HPFDLGLYNEA True PC9_epitope_Rep5 1274.59315184902 1274.5920499358601 81.381 2 0.20416920059455326 0.0004751158094785604 0.0008674974214265889 ['ENSG00000106399|ENST00000223129|RPA3'] 137847 11662 YESEWTNEV True H1975_Epitope_Rep2 1155.47203365683 1155.47092993586 49.93 2 0.20416586237909898 0.0004751158094785604 0.0008675640973212777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 106231 7975 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 35.622 2 0.2041626240119583 0.0004751158094785604 0.0008676287838060702 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 30125 21168 FYMDTSHLF True PC9_epitope_Rep1 1159.5008316873098 1159.4997299358602 86.256 2 0.20414960408067762 0.0004751158094785604 0.0008678889061679294 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 37436 6722 GVTIKPTVDDD True H1975_Epitope_Rep3 1158.57683307854 1158.5757299358602 30.812 2 0.20414953104372993 0.0004751158094785604 0.0008678903655777534 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B'] 38303 7378 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.56036993586 33.32 2 0.20413303499232166 0.0004751158094785604 0.0008682200494790654 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 118720 18962 TYTSYLDKF True PC9_epitope_Rep5 1136.5389910178399 1136.5378899358602 77.961 2 0.20413002515284637 0.0004751158094785604 0.0008682802165519886 ['ENSG00000069956|ENST00000261845|MAPK6'] 69677 19340 LVDTFLEDVK True PC9_epitope_Rep2 1177.6230549949698 1177.6219499358601 79.765 2 0.20412314777062582 0.0004751158094785604 0.0008684177119909947 ['CON__P34955'] 10156 7927 AYVHM[Oxidation]VTHF True PC9_epitope_Rep2 1119.5171508382302 1119.51604993586 35.856 2 0.20409998561955114 0.0004751158094785604 0.0008688809398388538 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 83526 6501 PTTLTDEEINR True H1975_Epitope_Rep1 1287.6306595565497 1287.6295699358602 30.067 2 0.20409340979448848 0.0004751158094785604 0.0008690124971956199 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 141771 8368 YVAFTPEGER True NCI_RA007_Epitope_Rep2 1167.5560380643099 1167.5549499358601 37.19 2 0.2040919553250379 0.0004751158094785604 0.0008690415983193754 ['ENSG00000044574|ENST00000324460|HSPA5'] 7937 3862 ATAQAVAPPR True NCI_RA007_Epitope_Rep4 980.5403284305198 980.53922993586 21.06 2 0.2040895941940956 0.0004751158094785604 0.0008690888420693211 ['ENST00000609438.1_1_4:90171359-90228902:-|nuORF'] 42216 7919 IDSDISGTLK True NCI_RA007_Epitope_Rep1 1047.5448046742702 1047.54370993586 34.797 2 0.2040884790948068 0.0004751158094785604 0.00086911115493033 ['ENSG00000257727|ENST00000273308|CNPY2'] 73218 19657 MSDLLSPLLY True H1975_Epitope_Rep1 1150.59439771898 1150.5933099358601 81.824 2 0.20408627555077602 0.0004751158094785604 0.0008691552489910474 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 57867 5810 LEFEHQRAP True NCI_RA007_Epitope_Rep4 1125.55670677065 1125.5550749037902 28.972 3 0.20408594778365785 0.0004751158094785604 0.0008691618079730447 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 66112 14942 LSELEAALQR True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 62.735 2 0.2040799880817902 0.0004751158094785604 0.0008692810768473576 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 54315 14206 KYDEIFYNL True NCI_RA007_Epitope_Rep4 1203.5811901829898 1203.58008993586 61.924 2 0.20407398318542547 0.0004751158094785604 0.0008694012667820644 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 42038 9981 IDIIPNPQER True H1975_Epitope_Rep1 1193.64043639461 1193.6393299358601 43.326 2 0.20407322392985716 0.0004751158094785604 0.000869416464713725 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 78389 22154 NYLDRFLSL True PC9_epitope_Rep3 1139.59750895347 1139.59640993586 90.5 2 0.20407265844328756 0.0004751158094785604 0.0008694277841666948 ['ENSG00000110092|ENST00000227507|CCND1'] 103369 4866 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 23.843 2 0.20405959979854804 0.0004751158094785604 0.0008696892226843334 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 134869 10073 VYVQHPITF True NCI_RA007_Epitope_Rep3 1102.5811306133398 1102.58002993586 46.715 2 0.20404975830019104 0.0004751158094785604 0.0008698863049395285 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 45419 21020 IQHDLIFSL True PC9_epitope_Rep1 1084.5916952970401 1084.5905899358602 85.681 2 0.20402997045906446 0.0004751158094785604 0.0008702827046192882 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 133636 5239 VYAHIYHQHF True NCI_RA007_Epitope_Rep3 1313.6305404172501 1313.62888490379 27.613 3 0.2040269933582587 0.0004751158094785604 0.0008703423590318147 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 18846 10962 ELDPQSSNLY True H1975_Epitope_Rep2 1164.52988288612 1164.52878993586 47.194 2 0.20402585148283195 0.0004751158094785604 0.0008703652407385261 ['nc|ENSG00000153029|Q95460-2|MR1', 'ENSG00000153029|ENST00000367580|MR1'] 33590 18357 GLFIIDDK True PC9_epitope_Rep2 919.5014833103099 919.50038993586 75.94 2 0.20402224599388127 0.0004751158094785604 0.0008704374940344564 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 95865 14518 RYKLYQEMF True PC9_epitope_Rep6 1276.6274291827597 1276.6263299358602 67.729 2 0.20402044485207968 0.0004751158094785604 0.0008704735908185088 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 89114 4604 QVQAAQFAK True NCI_RA007_Epitope_Rep5 989.5294293936498 989.52832993586 24.381 2 0.20401953978251416 0.0004751158094785604 0.0008704917299353147 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 24158 6662 EYQELM[Oxidation]NVK True NCI_RA007_Epitope_Rep1 1168.5434251557197 1168.5423299358602 29.925 2 0.20401696839753466 0.0004751158094785604 0.0008705432668851709 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 9980 11657 AYPHNLMTF True NCI_RA007_Epitope_Rep3 1092.50625142092 1092.5051499358601 52.972 2 0.20400429279732482 0.0004751158094785604 0.0008707973621669599 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 9126 14783 AVIVWSFMK True NCI_RA007_Epitope_Rep3 1079.58377346563 1079.5826699358602 65.569 2 0.2040011463679463 0.0004751158094785604 0.0008708604470635708 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 54498 14090 KYIDQKFVL True PC9_epitope_Rep2 1152.6542955536 1152.65263490379 59.471 3 0.2040001055330515 0.0004751158094785604 0.0008708813164772724 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 54341 14721 KYEELFPAF True NCI_RA007_Epitope_Rep3 1142.5648118428596 1142.56370993586 65.308 2 0.20399555800507135 0.0004751158094785604 0.0008709725032420933 ['ENSG00000105402|ENST00000263354|NAPA'] 78122 20513 NWPSRPYLF True PC9_epitope_Rep3 1178.58727862294 1178.5861899358601 84.165 2 0.2039746063997783 0.0004751158094785604 0.0008713927473211854 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 9816 11948 AYLEAIHNF True NCI_RA007_Epitope_Rep5 1076.52909504048 1076.5279899358602 52.615 2 0.2039615067250454 0.0004751158094785604 0.0008716556019093474 ['ENSG00000042753|ENST00000263270|AP2S1'] 104719 13328 SQVDVAVKI True PC9_epitope_Rep5 957.5494961318899 957.54838993586 56.279 2 0.20393846345605082 0.0004751158094785604 0.0008721181750213772 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 71455 21279 LYTPVLIRF True PC9_epitope_Rep3 1120.66446631448 1120.6633699358601 87.145 2 0.20393589184054314 0.0004751158094785604 0.000872169813183243 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 30109 20656 FYLEGGFSKF True PC9_epitope_Rep5 1193.57571087973 1193.57460993586 84.506 2 0.20392745931131812 0.0004751158094785604 0.0008723391602877383 ['ENSG00000139318|ENST00000279488|DUSP6'] 84182 10094 PYKVTQDEL True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 44.16 2 0.2039173192916915 0.0004751158094785604 0.0008725428419122623 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 21651 14412 ERSDLEYQL True PC9_epitope_Rep5 1151.54586730343 1151.5447699358601 60.435 2 0.20391572986278544 0.0004751158094785604 0.0008725747729460318 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 134106 20562 VYKVPPFTF True PC9_epitope_Rep1 1096.59571804832 1096.5946299358602 83.904 2 0.2039036966650192 0.0004751158094785604 0.0008728165534284909 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 125254 9025 VILEGELER True H1975_Epitope_Rep1 1056.5815245361598 1056.5804299358601 39.621 2 0.20390236482628912 0.0004751158094785604 0.0008728433179106144 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 29534 20716 FVHDLVLYL True PC9_epitope_Rep4 1117.6171817688898 1117.6160899358601 87.847 2 0.20390195346159903 0.0004751158094785604 0.0008728515848157993 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 75102 12049 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 51.662 2 0.20387873586783942 0.0004751158094785604 0.0008733182996973516 ['ENSG00000171223|ENST00000302754|JUNB'] 100803 10014 SLEIDLDSM[Oxidation]R True H1975_Epitope_Rep1 1193.55980349585 1193.5587099358602 43.455 2 0.20386525137317757 0.0004751158094785604 0.000873589476889508 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'CON__H-INV:HIT000015463', 'ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 12126 13706 DIDEVSSLLR True H1975_Epitope_Rep3 1145.59281749585 1145.59172993586 58.016 2 0.20386500547303316 0.0004751158094785604 0.0008735944227984747 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 134669 14099 VYSRTFTWL True NCI_RA007_Epitope_Rep4 1171.6025943339098 1171.6014899358602 61.513 2 0.20386143309359703 0.0004751158094785604 0.0008736662789680766 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 91354 7219 RGYLLKQAL True NCI_RA007_Epitope_Rep3 1060.6393141958 1060.63820993586 35.507 2 0.20382135309204613 0.0004751158094785604 0.0008744728695131469 ['nc|ENSG00000127483|Q5SSJ5-3|HP1BP3', 'nc|ENSG00000127483|Q5SSJ5-2|HP1BP3', 'ENSG00000127483|ENST00000438032|HP1BP3', 'HP1BP3|p.G420Efs*53|1|0.1|ENSG00000127483|chr1:20745651-20745651|C/-|frameshift_variant'] 52523 7328 KLEAEIATYR True NCI_RA007_Epitope_Rep2 1192.6451874218799 1192.6435349037902 33.127 3 0.20380619722021712 0.0004751158094785604 0.000874778068645423 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 45422 19922 IQHDLIFSL True PC9_epitope_Rep4 1084.5916952970401 1084.5905899358602 84.764 2 0.2038034070978856 0.0004751158094785604 0.0008748342659655618 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 128837 18428 VQDEFLEKL True PC9_epitope_Rep2 1119.5811901829898 1119.58008993586 76.215 2 0.20379854193132982 0.0004751158094785604 0.0008749322665040603 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 108307 18462 SYIRPEDIVNF True PC9_epitope_Rep6 1351.67721582615 1351.67610993586 83.654 2 0.20379564171243902 0.0004751158094785604 0.0008749906917389132 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 9501 6179 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 29.157 2 0.20376925570971893 0.0004751158094785604 0.0008755224205084643 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 15028 14612 DYLEVAKHF True PC9_epitope_Rep6 1120.55530978832 1120.5542099358602 68.115 2 0.20376643130697986 0.0004751158094785604 0.0008755793568624025 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.L126Pfs*6|1|0.29|ENSG00000128272|chr22:39521916-39521917|-/C|frameshift_variant'] 98529 16888 SFMPNSPRF True PC9_epitope_Rep5 1081.5015003936498 1081.50040993586 69.972 2 0.20375774488031193 0.0004751158094785604 0.0008757544874115307 ['ENSG00000160326|ENST00000371899|SLC2A6', 'nc|ENSG00000160326|Q9UGQ3-2|SLC2A6', 'ENST00000485978.1_1_9:136338979-136343630:-|nuORF'] 105611 9320 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4608749679298 40.81 1 0.20375149187505232 0.0004751158094785604 0.0008758805785195823 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 70361 6047 LVSSDPEINTK True NCI_RA007_Epitope_Rep2 1201.6190322436898 1201.61792993586 28.126 2 0.20375071044405937 0.0004751158094785604 0.0008758963372626244 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF', 'ENST00000484772.1_1_1:27271823-27272075:+|nuORF'] 136859 11898 YADPTKRLEL True PC9_epitope_Rep4 1204.6451874218799 1204.6435349037902 53.541 3 0.20374999597207155 0.0004751158094785604 0.0008759107459244842 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5'] 124730 19095 VHAPPMQLGF True PC9_epitope_Rep1 1095.5535359665098 1095.5524299358601 78.239 2 0.20374730264650942 0.0004751158094785604 0.0008759650640013408 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 134598 21480 VYSIVPQSW True PC9_epitope_Rep3 1077.54949613189 1077.54838993586 87.914 2 0.20373302563820506 0.0004751158094785604 0.0008762530542921511 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 54370 11572 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.5338699358601 49.836 2 0.20373126848479153 0.0004751158094785604 0.000876288505474028 ['ENSG00000123975|ENST00000314355|CKS2'] 90710 4523 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 22.519 2 0.2037265169716448 0.0004751158094785604 0.0008763843761107747 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 17433 6806 EHDTTEYKL True PC9_epitope_Rep1 1134.51931820242 1134.51822993586 30.985 2 0.20370967009174934 0.0004751158094785604 0.000876724378107114 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 68176 7163 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 32.486 2 0.2037057438641032 0.0004751158094785604 0.0008768036358373983 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 86679 20873 QLIDKVWQL True PC9_epitope_Rep3 1141.64954452633 1141.64844993586 85.56 2 0.20369460620674978 0.0004751158094785604 0.0008770285079232718 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 22274 12056 ETDEKDFYLY True H1975_Epitope_Rep1 1321.5714133449299 1321.57030993586 51.385 2 0.20369177036809055 0.0004751158094785604 0.0008770857734533666 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 140383 20368 YRDWFSSQL True PC9_epitope_Rep5 1200.55637241748 1200.55526993586 83.38 2 0.2036862493949901 0.0004751158094785604 0.0008771972720251425 ['ENST00000522359.2_1_11:61630757-61632750:+|nuORF', 'nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2'] 89185 6878 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 31.857 2 0.20368534024587162 0.0004751158094785604 0.0008772156340698181 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 75159 8492 NHYQKQLEI True PC9_epitope_Rep5 1171.5985715826298 1171.59746993586 37.605 2 0.20367799288878854 0.0004751158094785604 0.0008773640424650187 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 95238 9465 RVLQALEGLK True NCI_RA007_Epitope_Rep4 1125.6869926642098 1125.6858899358601 43.264 2 0.20367500696453897 0.0004751158094785604 0.0008774243619916891 ['ENSG00000105372|ENST00000598742|RPS19'] 3219 7487 AGELTEDEVER True PC9_epitope_Rep2 1246.5677249468197 1246.5666299358602 34.17 2 0.20366829713738838 0.0004751158094785604 0.0008775599243429584 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 36633 16112 GVIDLIFEK True NCI_RA007_Epitope_Rep5 1032.58554728744 1032.5844499358602 68.704 2 0.20366578785080033 0.0004751158094785604 0.0008776106262454715 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 97931 7003 SENEYIMKA True H1975_Epitope_Rep2 1083.4906609264299 1083.4895699358601 31.86 2 0.20366498917471348 0.0004751158094785604 0.000877626764674631 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 18344 6618 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep1 1176.6060254122801 1176.6049299358601 30.512 2 0.20365957417168207 0.0004751158094785604 0.0008777361906540831 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 108454 13438 SYLSRLQYF True NCI_RA007_Epitope_Rep3 1175.5975089534702 1175.59640993586 60.135 2 0.20365362998838568 0.0004751158094785604 0.0008778563260250925 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'IQGAP2|p.L938Ffs*10|1|0.08|ENSG00000145703|chr5:76668813-76668813|C/-|frameshift_variant', 'IQGAP2|p.P1231Lfs*7|1|0.14|ENSG00000145703|chr5:76683143-76683143|C/-|frameshift_variant', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 38975 18843 HHIYLEGTLL True PC9_epitope_Rep5 1194.6397081186199 1194.6386099358601 77.496 2 0.20365135254853595 0.0004751158094785604 0.0008779023587670705 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 139143 12410 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 52.821 2 0.2036436592539882 0.0004751158094785604 0.0008780578773498388 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 76770 6844 NQWDGTQHGV True PC9_epitope_Rep6 1140.49483479008 1140.49372993586 35.197 2 0.20363941477009362 0.0004751158094785604 0.0008781436906656002 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 114400 9997 TPSQIGVILR True H1975_Epitope_Rep3 1082.64479349906 1082.64368993586 43.489 2 0.20362766454831635 0.0004751158094785604 0.0008783812959339782 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF'] 118903 7593 VADKVHLMY True H1975_Epitope_Rep3 1074.55320161334 1074.55210993586 34.188 2 0.20362183979684773 0.0004751158094785604 0.0008784991041374814 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 65962 15552 LSDVFPGVQY True H1975_Epitope_Rep2 1123.5549754351498 1123.5538699358601 64.976 2 0.20361859276188093 0.0004751158094785604 0.0008785647837513679 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 74085 4983 NDPSVQQDIK True NCI_RA007_Epitope_Rep2 1142.5567663403 1142.5556699358601 24.005 2 0.20361832498229232 0.0004751158094785604 0.0008785702005004839 ['ENSG00000044574|ENST00000324460|HSPA5'] 108434 21852 SYLPISPTF True PC9_epitope_Rep5 1023.52769805815 1023.5266099358599 89.089 2 0.20361126931265677 0.0004751158094785604 0.0008787129373852246 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 31678 10155 GEFSITYKP True NCI_RA007_Epitope_Rep4 1040.5178616504397 1040.51676993586 45.919 2 0.20361072262380872 0.0004751158094785604 0.000878723997924792 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 93619 8123 RQPYAVSEL True NCI_RA007_Epitope_Rep3 1061.5505587610498 1061.54946993586 39.057 2 0.20360270772747022 0.0004751158094785604 0.0008788861703243741 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 135068 16319 WEALVSPVV True H1975_Epitope_Rep2 998.54368247546 998.54258993586 67.989 2 0.20359734782839936 0.0004751158094785604 0.0008789946385946701 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 32208 6902 GEYEWVHKP True H1975_Epitope_Rep2 1143.53490869691 1143.53326490379 31.468 3 0.20359240304476586 0.0004751158094785604 0.0008790947180816673 ['ENSG00000117133|ENST00000370654|RPF1'] 28547 12930 FSEQGINEFLR True H1975_Epitope_Rep3 1338.6568147347398 1338.6557099358602 54.963 2 0.2035920986157165 0.0004751158094785604 0.0008791008799184694 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 115427 6751 TRLQQAQAL True PC9_epitope_Rep2 1027.5774422152297 1027.5763499358602 31.374 2 0.20357785514877813 0.0004751158094785604 0.0008793892251454802 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 24268 18769 EYTDVLQKI True PC9_epitope_Rep3 1107.58119018299 1107.58008993586 77.416 2 0.2035698642511924 0.0004751158094785604 0.0008795510346829282 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 49970 16684 KIQEILTQV True PC9_epitope_Rep3 1070.63356010902 1070.6324699358602 69.31 2 0.20355656406667622 0.0004751158094785604 0.0008798204194207272 ['ENSG00000136231|ENST00000258729|IGF2BP3', 'nc|ENSG00000136231|O00425-2|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 78455 19171 NYLVRINEI True PC9_epitope_Rep1 1132.62405805448 1132.62296993586 78.535 2 0.20354411764507968 0.0004751158094785604 0.000880072586819875 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.Y188Ifs*12|1|0.05|ENSG00000135829|chr1:182854112-182854113|-/G|frameshift_variant'] 76836 9228 NRAQIQTVI True PC9_epitope_Rep6 1041.59309227937 1041.59198993586 45.641 2 0.20352001355163135 0.0004751158094785604 0.0008805611475174618 ['ENSG00000114030|ENST00000344337|KPNA1'] 48090 12152 IYNGDMEKI True PC9_epitope_Rep3 1081.51139637101 1081.51028993586 51.782 2 0.2035144096116151 0.0004751158094785604 0.0008806747715435708 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 95757 9341 RYIANTVEL True NCI_RA007_Epitope_Rep5 1077.58185888933 1077.5807699358602 42.571 2 0.2035141277684337 0.0004751158094785604 0.0008806804865107859 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 95701 20295 RYFLPPYTF True PC9_epitope_Rep4 1202.6124307416196 1202.61132993586 86.207 2 0.20349864392108613 0.0004751158094785604 0.0008809945114601397 ['ENSG00000023608|ENST00000216294|SNAPC1'] 71296 15726 LYQDHMQYI True PC9_epitope_Rep5 1209.54884450889 1209.54774993586 65.486 2 0.2034966823039075 0.0004751158094785604 0.0008810343026577667 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 106539 15176 STLTEEGVIKV True PC9_epitope_Rep2 1174.64451871554 1174.64342993586 63.632 2 0.20348918512311628 0.0004751158094785604 0.0008811863987905463 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 142280 13255 YYAEVETRI True PC9_epitope_Rep2 1142.5607890915799 1142.5596899358602 56.26 2 0.20348698445739977 0.0004751158094785604 0.0008812310489379478 ['ENSG00000112685|ENST00000230449|EXOC2'] 31177 10897 GAYKYIQEL True H1975_Epitope_Rep2 1083.56006081559 1083.5589699358602 46.945 2 0.2034788588042351 0.0004751158094785604 0.000881395933078191 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 42631 4581 IEHDVVMKA True H1975_Epitope_Rep2 1040.5324661687598 1040.53136993586 22.725 2 0.20347855897353337 0.0004751158094785604 0.0008814020177751692 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 114130 7990 TPHLQGETV True PC9_epitope_Rep5 980.4927095317599 980.49160993586 35.672 2 0.20347631782125294 0.0004751158094785604 0.000881447500551073 ['nc|ENSG00000167395|O15015-1|ZNF646', 'ENSG00000167395|ENST00000300850|ZNF646'] 8065 11486 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.4858499358602 49.303 2 0.2034755602975767 0.0004751158094785604 0.0008814628745499333 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 138704 10353 YINPDLALEEK True H1975_Epitope_Rep1 1303.6659824361097 1303.6648899358602 44.77 2 0.2034632474301894 0.0004751158094785604 0.0008817128028187188 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1', 'ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 118464 16200 TYPKIWVKV True PC9_epitope_Rep5 1132.66446631448 1132.66282490379 67.304 3 0.20345857165443865 0.0004751158094785604 0.000881807730974751 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 44062 17727 IILEEGKEILV True PC9_epitope_Rep6 1254.7435044808199 1254.74240993586 80.82 2 0.20345686498013807 0.0004751158094785604 0.000881842382633218 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 7035 5840 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep3 935.4348606187698 935.43431496793 29.952 1 0.20344378019263823 0.0004751158094785604 0.0008821080965044513 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 54011 13215 KVFNDYTAV True PC9_epitope_Rep5 1055.52876068731 1055.52766993586 55.839 2 0.20343661335572033 0.0004751158094785604 0.0008822536680958094 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 106735 6921 STWEGIQAGK True NCI_RA007_Epitope_Rep3 1075.5298233164697 1075.5287299358602 34.326 2 0.20342194546078038 0.0004751158094785604 0.0008825516750470227 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 43726 11450 IHEPEPHIL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 49.04 2 0.20341367737559668 0.0004751158094785604 0.000882719701849131 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 14830 11685 DVTGAEALLER True H1975_Epitope_Rep3 1172.60371653272 1172.60260993586 50.085 2 0.2034107365621274 0.0004751158094785604 0.0008827794737829866 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 109868 18622 TEESFIPLTI True H1975_Epitope_Rep2 1148.5965058939598 1148.59540993586 77.289 2 0.20340237271473807 0.0004751158094785604 0.0008829494908885933 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 62244 18666 LLFEGEKITI True PC9_epitope_Rep6 1161.6645258841297 1161.6634299358602 84.442 2 0.20338737529352202 0.0004751158094785604 0.000883254435005534 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 87780 15352 QRDFNSELL True PC9_epitope_Rep3 1120.5512870370399 1120.55018993586 64.207 2 0.20338410068000956 0.0004751158094785604 0.0008833210321099135 ['ENSG00000042429|ENST00000251871|MED17', 'MED17|p.C601*|1|0.39|ENSG00000042429|chr11:93811909-93811910|TG/-|frameshift_variant', 'MED17|p.H347Ifs*25|1|0.19|ENSG00000042429|chr11:93796435-93796435|C/-|frameshift_variant'] 28181 21277 FRDYFPIQL True PC9_epitope_Rep2 1197.6182443980497 1197.6171499358602 87.304 2 0.2033802439527646 0.0004751158094785604 0.0008833994743494843 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 48919 12879 KEEDVLKFLAA True H1975_Epitope_Rep1 1261.69180326113 1261.69070993586 54.61 2 0.20337995638461745 0.0004751158094785604 0.0008834053234976174 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 70792 14732 LYANM[Oxidation]FERL True PC9_epitope_Rep6 1171.56958033391 1171.56848993586 68.616 2 0.20337853406894957 0.0004751158094785604 0.000883434254028942 ['ENSG00000004478|ENST00000001008|FKBP4'] 85879 17116 QHFDTIYSI True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 73.84 2 0.20337748255547128 0.0004751158094785604 0.0008834556428902802 ['ENSG00000010292|ENST00000315579|NCAPD2'] 105863 7791 SSNIFTVAK True NCI_RA007_Epitope_Rep3 965.51819600361 965.51708993586 37.771 2 0.20337131779006584 0.0004751158094785604 0.0008835810509832299 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.Q878H|1|0.06|ENSG00000100280|chr22:29330510-29330510|C/G|missense_variant', 'ENST00000482818.1_1_22:29726183-29727937:-|nuORF'] 69653 8767 LVDSKGFDEY True H1975_Epitope_Rep1 1171.5397192938299 1171.5386299358602 38.652 2 0.20336078360605536 0.0004751158094785604 0.0008837953862573249 ['ENSG00000164687|ENST00000297258|FABP5'] 118381 11342 TYNSSGAYRF True PC9_epitope_Rep5 1164.5199869087598 1164.5188899358602 48.623 2 0.20334858360062485 0.0004751158094785604 0.0008840436805748104 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 8075 9949 ATDRWYDEY True H1975_Epitope_Rep1 1217.49891711101 1217.4978299358602 43.206 2 0.20334621096155558 0.0004751158094785604 0.0008840919766134353 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 21876 13162 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45454993586 55.752 2 0.20334450850625577 0.0004751158094785604 0.0008841266324180082 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 54037 14327 KVIDEIYRV True PC9_epitope_Rep5 1133.64445914589 1133.6433699358602 60.11 2 0.20334309019032518 0.0004751158094785604 0.0008841555052177656 ['ENSG00000143756|ENST00000366862|FBXO28'] 41257 6817 HVLVTLGEK True NCI_RA007_Epitope_Rep2 994.58113061334 994.58002993586 31.132 2 0.20333971286757033 0.0004751158094785604 0.0008842242615233231 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 116278 9784 TTDGKLPEV True PC9_epitope_Rep1 958.4971262058599 958.49602993586 42.496 2 0.20333786905996826 0.0004751158094785604 0.0008842618004413186 ['ENSG00000149257|ENST00000358171|SERPINH1'] 42471 6772 IEEDKWRVA True H1975_Epitope_Rep3 1144.5876725457601 1144.58656993586 31.003 2 0.2033373188692394 0.0004751158094785604 0.0008842730023343819 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'STARD4|p.K33M|1|0.13|ENSG00000164211|chr5:111507336-111507336|T/A|missense_variant', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'ENSG00000164211|ENST00000296632|STARD4'] 40912 14617 HSQFLGYPITL True H1975_Epitope_Rep1 1274.6659228664598 1274.66482993586 61.435 2 0.20332853029834344 0.0004751158094785604 0.0008844519570912573 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 90855 9613 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 41.953 3 0.20332066285165015 0.0004751158094785604 0.000884612186533464 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 9943 20852 AYMPHTFFI True PC9_epitope_Rep5 1125.53173789277 1125.53064993586 85.257 2 0.20330918437728895 0.0004751158094785604 0.0008848460108618373 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 8097 10481 ATDWGDTQAY True H1975_Epitope_Rep3 1126.4567179458597 1126.45562993586 45.378 2 0.2032819816591559 0.0004751158094785604 0.0008854003962948799 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 141035 20044 YSLEKVFGI True PC9_epitope_Rep4 1054.5698972233 1054.5688099358601 85.236 2 0.20327192542825373 0.0004751158094785604 0.0008856054282642072 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 29261 19871 FVADEELVHL True PC9_epitope_Rep2 1170.5920892198599 1170.59098993586 81.827 2 0.20325858470039146 0.0004751158094785604 0.000885877499858751 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'ENST00000530673.1_2_11:64878667-64879056:+|nuORF', 'ENST00000533827.5_1_11:64876997-64879056:+|nuORF'] 24397 17816 FAAPEKDIFL True PC9_epitope_Rep6 1149.60701100801 1149.6059099358602 81.16 2 0.20325121272944796 0.0004751158094785604 0.0008860278802322973 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 31672 10732 GEFSITYKP True NCI_RA007_Epitope_Rep1 1040.5178616504397 1040.51676993586 45.736 2 0.20324832101143012 0.0004751158094785604 0.0008860868751982525 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 49509 21680 KFIDPIYQVW True PC9_epitope_Rep1 1307.69140933831 1307.6903099358601 88.22 2 0.20324814454941986 0.0004751158094785604 0.0008860904753899189 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 90488 7072 RELEDDARVIA True H1975_Epitope_Rep3 1285.6626283911698 1285.66099490379 32.17 3 0.2032432491621487 0.0004751158094785604 0.0008861903573113792 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 24169 11664 EYQIKTNQL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 49.861 2 0.20321987184094895 0.0004751158094785604 0.0008866674869154254 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF', 'ENST00000602395.1_1_10:22607528-22615407:+|nuORF', 'ENST00000496071.5_1_10:22607528-22608924:+|nuORF', 'ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3'] 61988 9981 LLDPNPHMY True H1975_Epitope_Rep2 1098.5168161046201 1098.51570993586 43.382 2 0.20319885684981862 0.0004751158094785604 0.0008870966214305863 ['ENSG00000091844|ENST00000206262|RGS17'] 20080 6804 EM[Oxidation]FEDTVEER True H1975_Epitope_Rep1 1299.5288972903898 1299.52778993586 31.214 2 0.20319339552012142 0.0004751158094785604 0.0008872081780638045 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7'] 120211 13594 VEAQLQELQVK True PC9_epitope_Rep5 1283.7085159544297 1283.7074099358601 57.314 2 0.20318679801845424 0.0004751158094785604 0.0008873429616427822 ['ENSG00000100345|ENST00000216181|MYH9'] 140011 5213 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54542993586 25.069 2 0.20318316217415003 0.0004751158094785604 0.0008874172488566423 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 12038 16122 DHSPDLYSL True PC9_epitope_Rep4 1045.47163973401 1045.4705499358602 69.953 2 0.20317608463985745 0.0004751158094785604 0.0008875618742325444 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 41478 14227 HYLPDLHHL True PC9_epitope_Rep1 1143.5825275956702 1143.5808749037901 59.549 3 0.2031741996356019 0.0004751158094785604 0.0008876003972056912 ['ENSG00000130702|ENST00000252999|LAMA5'] 34925 7385 GQNPTEAEL True NCI_RA007_Epitope_Rep4 957.44033960573 957.43924993586 35.049 2 0.20317167222847518 0.0004751158094785604 0.0008876520513053319 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 125281 14754 VILPTVHEV True PC9_epitope_Rep4 1005.5858816406101 1005.58478993586 64.685 2 0.20316688243509776 0.0004751158094785604 0.0008877499513891314 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 104147 14240 SQESKVLYL True PC9_epitope_Rep1 1065.57062549929 1065.5695299358601 59.599 2 0.20316482563364965 0.0004751158094785604 0.0008877919943203853 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 28007 19080 FQLRSFDQL True PC9_epitope_Rep4 1152.5927579261997 1152.5916699358602 81.482 2 0.20316397931037922 0.0004751158094785604 0.0008878092945337386 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 29410 10703 FVDPYPVNKY True H1975_Epitope_Rep2 1240.6128246644398 1240.61172993586 46.193 2 0.2031582061982882 0.0004751158094785604 0.0008879273152814546 ['ENSG00000174010|ENST00000328046|KLHL15'] 115178 7834 TRDPQFQKL True PC9_epitope_Rep3 1131.6036569630699 1131.6020249037902 35.123 3 0.20315668354784716 0.0004751158094785604 0.0008879584457151232 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 24463 12496 FADQEVRSL True PC9_epitope_Rep5 1063.52982331647 1063.5287299358602 53.064 2 0.20315150725625128 0.0004751158094785604 0.0008880642826577013 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 46700 9763 ITDVDNGYY True H1975_Epitope_Rep3 1058.4556553167 1058.45507496793 42.576 1 0.20315109727708797 0.0004751158094785604 0.0008880726658291911 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 53685 8409 KSDVHLNFY True H1975_Epitope_Rep3 1121.55055876105 1121.54946993586 37.329 2 0.2031377370281159 0.0004751158094785604 0.0008883458969560268 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 140985 14894 YSHDGAFLAV True PC9_epitope_Rep4 1078.5083595959 1078.5072699358602 65.23 2 0.20313732992719566 0.0004751158094785604 0.0008883542239211224 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 49857 9253 KIDENQLMY True H1975_Epitope_Rep2 1152.54851015572 1152.54740993586 40.548 2 0.20313696524720387 0.0004751158094785604 0.0008883616832622196 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN'] 26167 20644 FHDDWISSI True PC9_epitope_Rep5 1118.5032742154601 1118.5021699358601 84.46 2 0.20313454145672424 0.0004751158094785604 0.0008884112622424059 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 129375 9406 VRDQTELRL True PC9_epitope_Rep1 1128.62512068364 1128.6234749037899 41.039 3 0.20313103295790805 0.0004751158094785604 0.000888483034002618 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1'] 140703 7132 YSADREDLY True H1975_Epitope_Rep1 1130.48801807414 1130.4869299358602 32.458 2 0.20312220495838926 0.0004751158094785604 0.0008886636500896835 ['ENSG00000174231|ENST00000304992|PRPF8'] 112179 10667 TKEVNSGFFY True H1975_Epitope_Rep3 1190.5607890915799 1190.5596899358602 46.104 2 0.20312212502302923 0.0004751158094785604 0.0008886652856920653 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 40066 10066 HPTWALKEA True PC9_epitope_Rep3 1051.5450794577898 1051.54398993586 43.673 2 0.2031157452339015 0.0004751158094785604 0.0008887958358848894 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 134643 21233 VYSQFITQL True PC9_epitope_Rep3 1097.5757108797297 1097.57460993586 86.964 2 0.20311496668579762 0.0004751158094785604 0.0008888117687009315 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 104733 14763 SQVEILQRV True PC9_epitope_Rep3 1070.6084079903399 1070.60730993586 61.922 2 0.20309495249759477 0.0004751158094785604 0.0008892214530230771 ['ENSG00000117318|ENST00000374561|ID3'] 103150 11765 SPIENIQRV True PC9_epitope_Rep3 1054.57710786206 1054.5760099358602 50.273 2 0.2030825679233903 0.0004751158094785604 0.0008894750563316452 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 25478 6971 FEERSGVVP True H1975_Epitope_Rep2 1018.5083595958997 1018.50726993586 31.735 2 0.20306990959451282 0.0004751158094785604 0.000889734340377746 ['ENSG00000170584|ENST00000302764|NUDCD2', 'NUDCD2|p.T16Ifs*30|1|0.16|ENSG00000170584|chr5:163459926-163460004|TCCTGGGCGCGCGTGCCTGGCGGCACCTGAACTTCAATGAACACCTCCTCCAAGGTCTGGTACCACTGGCCCCACGGGG/-|frameshift_variant'] 24865 17080 FAYDGKDYL True PC9_epitope_Rep3 1090.4971262058598 1090.4960299358602 70.85 2 0.2030466051607717 0.0004751158094785604 0.0008902118898002748 ['ENSG00000204592|ENST00000376630|HLA-E'] 133828 13260 VYGFLRNGF True NCI_RA007_Epitope_Rep5 1071.5501648382299 1071.5490699358602 57.684 2 0.20304105928891852 0.0004751158094785604 0.0008903255724723339 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 8809 15320 AVDSLVPIGR True PC9_epitope_Rep1 1025.58694426977 1025.58584993586 63.748 2 0.20303882641000923 0.0004751158094785604 0.0008903713475007769 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 41519 18580 HYNSDLNNLLF True PC9_epitope_Rep6 1348.6411646706 1348.64006993586 84.109 2 0.2030290349662967 0.0004751158094785604 0.0008905721044018734 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 134278 5958 VYNNNSSRF True PC9_epitope_Rep5 1099.50467119779 1099.50356993586 27.912 2 0.2030264402834693 0.0004751158094785604 0.0008906253115696633 ['ENSG00000145555|ENST00000513610|MYO10'] 77206 19321 NRSQIYFTL True PC9_epitope_Rep5 1140.5927579262 1140.5916699358602 79.362 2 0.20302565960044558 0.0004751158094785604 0.0008906413210607536 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3', 'nc|ENSG00000175556|Q496Y0-2|LONRF3'] 137423 7764 YEDATKITV True H1975_Epitope_Rep1 1038.5233409537 1038.5222499358601 34.822 2 0.20301835255760678 0.0004751158094785604 0.0008907911808106858 ['ENSG00000132383|ENST00000254719|RPA1'] 66196 9701 LSERYAELY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 42.299 2 0.20301731145446641 0.0004751158094785604 0.0008908125347975036 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 2582 5286 AEQVVQGMKEA True H1975_Epitope_Rep2 1188.58087291316 1188.5797699358602 25.393 2 0.2030168640281311 0.0004751158094785604 0.000890821712082555 ['ENSG00000117862|ENST00000371626|TXNDC12'] 141817 7591 YVDDPYQKY True H1975_Epitope_Rep3 1189.5291546101298 1189.52804993586 34.181 2 0.20301081278569688 0.0004751158094785604 0.0008909458401005809 ['ENSG00000132313|ENST00000337109|MRPL35', 'MRPL35|p.W171C|1|0.36|ENSG00000132313|chr2:86210614-86210614|G/T|missense_variant'] 85292 5970 QEQRLQGEVVA True H1975_Epitope_Rep3 1255.65206370747 1255.65096993586 27.975 2 0.2030083478294257 0.0004751158094785604 0.0008909964082655635 ['ENSG00000161654|ENST00000293406|LSM12', 'nc|ENSG00000161654|Q3MHD2-2|LSM12'] 40338 13398 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5439899358599 56.552 2 0.2030042656019485 0.0004751158094785604 0.00089108016080992 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 52608 17979 KLLPGDLTQV True PC9_epitope_Rep2 1082.6335601090202 1082.6324699358602 74.46 2 0.2030015468411041 0.0004751158094785604 0.0008911359443305335 ['ENSG00000147459|ENST00000276440|DOCK5', 'DOCK5|p.F712Lfs*13|1|0.17|ENSG00000147459|chr8:25334140-25334161|TAATCCTGTACTTGAAACCTAC/-|frameshift_variant'] 41068 6325 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60750490379 29.304 3 0.20299675285487856 0.0004751158094785604 0.0008912343158478975 ['CON__P12763'] 40320 13365 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 56.269 2 0.20299577876382308 0.0004751158094785604 0.0008912543053082387 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 40967 2745 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.60641490379 14.597 3 0.2029919979093885 0.0004751158094785604 0.0008913318970170215 ['nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 8810 15324 AVDSLVPIGR True PC9_epitope_Rep3 1025.58694426977 1025.58584993586 64.099 2 0.20298159694246531 0.0004751158094785604 0.0008915453834075028 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 107272 21086 SVLDDKLVFV True PC9_epitope_Rep5 1133.63322575585 1133.6321299358601 86.17 2 0.2029784770919024 0.0004751158094785604 0.0008916094303017464 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 121333 7485 VEVEGDNRYIA True H1975_Epitope_Rep2 1263.6095301891498 1263.6084299358602 33.74 2 0.20295883660536762 0.0004751158094785604 0.0008920127325719935 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 18792 18554 ELDETKIIL True PC9_epitope_Rep2 1072.6015912743999 1072.6004899358602 76.718 2 0.20294932828878487 0.0004751158094785604 0.0008922080442588191 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 49446 6077 KEYDVAVQA True NCI_RA007_Epitope_Rep3 1021.5080252427298 1021.50692993586 30.888 2 0.20294827162299445 0.0004751158094785604 0.0008922297520295181 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 112435 8730 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.51257496793 38.541 1 0.20294096176509382 0.0004751158094785604 0.0008923799376903175 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 38251 5657 HEDVRLYTA True H1975_Epitope_Rep2 1102.54072235334 1102.5396299358601 26.757 2 0.20293723738834546 0.0004751158094785604 0.0008924564671198481 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENST00000590533.1_1_19:2807573-2808419:+|nuORF', 'ENST00000591149.5_1_19:2807001-2808381:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 9834 18003 AYLEAYKEF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 74.042 2 0.20293703633503865 0.0004751158094785604 0.0008924605986009924 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 141700 17653 YTVEDIQRL True PC9_epitope_Rep3 1135.5873381925899 1135.58624993586 73.094 2 0.20293599277458638 0.0004751158094785604 0.0008924820432236314 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 11171 7740 DDNM[Oxidation]FQIGK True H1975_Epitope_Rep3 1082.47026021546 1082.46916993586 34.754 2 0.2029332712418169 0.0004751158094785604 0.0008925379717331046 ['ENSG00000113387|ENST00000265073|SUB1'] 122438 7651 VGDVTGAQAY True H1975_Epitope_Rep2 979.4610750503098 979.45996993586 34.383 2 0.2029323207872775 0.0004751158094785604 0.000892557504755177 ['ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000185201|ENST00000616316|IFITM2', 'ENSG00000142089|ENST00000399808|IFITM3'] 8807 10557 AVDSLVPIGR True NCI_RA007_Epitope_Rep1 1025.58694426977 1025.58584993586 45.048 2 0.20292880736079497 0.0004751158094785604 0.0008926297137580214 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 95967 8302 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64474993586 38.611 2 0.20292490392777546 0.0004751158094785604 0.0008927099451640244 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 21472 16120 ERLGQFM[Oxidation]TL True PC9_epitope_Rep5 1109.55393026977 1109.55282993586 66.996 2 0.20292342302168195 0.0004751158094785604 0.0008927403856928506 ['ENSG00000113739|ENST00000265087|STC2'] 54916 11016 KYPSDLPYM True NCI_RA007_Epitope_Rep3 1112.5212327787199 1112.52012993586 50.423 2 0.20291570171004994 0.0004751158094785604 0.0008928991167474619 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG'] 14342 5376 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 25.513 2 0.20290522615180173 0.0004751158094785604 0.0008931145135495967 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 65994 8325 LSEAFHEEY True H1975_Epitope_Rep2 1123.4822044177101 1123.48110993586 36.972 2 0.20290427949426965 0.0004751158094785604 0.000893133981142203 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'ENST00000540438.5_1_11:113669964-113691034:-|nuORF'] 86213 17196 QIIRELQVL True PC9_epitope_Rep6 1110.67609362734 1110.6749899358601 78.733 2 0.2029013011712543 0.0004751158094785604 0.0008931952318110218 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 34868 10174 GQLDTPGVHNV True PC9_epitope_Rep1 1135.56218607391 1135.56108993586 44.01 2 0.202890194310239 0.0004751158094785604 0.0008934236869916467 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 65753 6801 LSDDHGASWRY True H1975_Epitope_Rep2 1305.5738133867699 1305.57217490379 31.078 3 0.20288869059392983 0.0004751158094785604 0.0008934546211868843 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 68270 7572 LTEDKETLQY True H1975_Epitope_Rep2 1238.60304782638 1238.6019499358601 34.077 2 0.20288814409208686 0.0004751158094785604 0.0008934658639956728 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2'] 88609 10691 QTDQM[Oxidation]VFNAY True H1975_Epitope_Rep2 1231.51793868387 1231.5168499358601 46.147 2 0.20288399493747822 0.0004751158094785604 0.0008935512263451202 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 17460 17433 EHFAALQSL True PC9_epitope_Rep5 1014.51344497634 1014.51234993586 72.057 2 0.20287050172245732 0.0004751158094785604 0.0008938288846434936 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 56151 16528 LAVNM[Oxidation]VPFPR True PC9_epitope_Rep2 1158.62195025994 1158.6208499358602 68.815 2 0.20286575554972236 0.0004751158094785604 0.0008939265701702264 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 42358 8208 IEAQLGDVRA True NCI_RA007_Epitope_Rep4 1070.5720224816198 1070.57092993586 38.358 2 0.20285114309775362 0.0004751158094785604 0.0008942273902770713 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'ENST00000405746.1_1_6:72295335-72295494:+|nuORF'] 8128 13682 ATEFIMNEY True H1975_Epitope_Rep1 1116.47976188956 1116.4786699358601 57.763 2 0.20284349455839484 0.0004751158094785604 0.0008943848878639327 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 26006 13813 FGFVTFDDHD True NCI_RA007_Epitope_Rep3 1198.4931034545798 1198.49200993586 61.662 2 0.20282946038241864 0.0004751158094785604 0.0008946739498968126 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 131638 5140 VTLTSEEEAR True H1975_Epitope_Rep1 1133.5564319871298 1133.55532993586 24.837 2 0.20282740032663518 0.0004751158094785604 0.000894716388767963 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 112175 10672 TKEVNSGFFY True H1975_Epitope_Rep1 1190.5607890915799 1190.5596899358602 46.008 2 0.20282193960031353 0.0004751158094785604 0.0008948288940647916 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 41263 8975 HVLVTLGEK True PC9_epitope_Rep3 994.58113061334 994.58002993586 39.469 2 0.2028171955853925 0.0004751158094785604 0.000894926644743138 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 134895 16386 VYVQNVVKL True PC9_epitope_Rep5 1060.6280808057597 1060.6269899358601 68.027 2 0.20280724057403768 0.0004751158094785604 0.0008951318030977383 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 41428 11638 HYILHNSFF True NCI_RA007_Epitope_Rep4 1176.5716285587998 1176.5705299358601 51.719 2 0.20280672079067413 0.0004751158094785604 0.0008951425163751603 ['ENSG00000163659|ENST00000295924|TIPARP'] 6814 12396 AQEYEALLNIK True H1975_Epitope_Rep3 1290.6819668534197 1290.68086993586 52.87 2 0.20279138253818466 0.0004751158094785604 0.0008954587116578904 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 42616 7762 IEGQGVFREA True NCI_RA007_Epitope_Rep5 1104.55637241748 1104.55526993586 36.554 2 0.20277875848806853 0.0004751158094785604 0.0008957190381940012 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 85849 20151 QHFDAAYIF True PC9_epitope_Rep1 1110.5134449763398 1110.5123499358601 82.341 2 0.20275578305845582 0.0004751158094785604 0.0008961930202497114 ['ENSG00000023608|ENST00000216294|SNAPC1'] 37893 17134 GYSEHFVEF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 73.912 2 0.20275462855041004 0.0004751158094785604 0.0008962168443345051 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 75113 12647 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 53.649 2 0.20275374073980482 0.0004751158094785604 0.0008962351653622628 ['ENSG00000171223|ENST00000302754|JUNB'] 17798 16280 EHSLVIDTL True PC9_epitope_Rep4 1025.53932537101 1025.53822993586 70.578 2 0.20275121869099536 0.0004751158094785604 0.0008962872128883371 ['ENSG00000143256|ENST00000368010|PFDN2'] 9498 5722 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 27.399 2 0.20274872975447056 0.0004751158094785604 0.0008963385800482768 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 91367 19087 RHDDYLVML True PC9_epitope_Rep1 1160.5648289262 1160.56318490379 78.209 3 0.20274849832693098 0.0004751158094785604 0.000896343356445245 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 33125 5141 GISEETTTGVH True NCI_RA007_Epitope_Rep2 1129.52513185885 1129.5240299358602 24.617 2 0.2027479665477848 0.0004751158094785604 0.0008963543318489942 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 142340 11348 YYEEQHPEL True PC9_epitope_Rep5 1206.5193182024198 1206.51822993586 48.647 2 0.2027427836270316 0.0004751158094785604 0.0008964613093454909 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 21650 13078 ERSDLEYQL True PC9_epitope_Rep4 1151.54586730343 1151.5447699358601 58.196 2 0.2027367917673032 0.0004751158094785604 0.0008965849996160625 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 49877 9936 KIFSGVFVK True NCI_RA007_Epitope_Rep2 1023.6117024656298 1023.61060993586 43.276 2 0.20273486813154135 0.0004751158094785604 0.000896624712958338 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 17786 15999 EHSLPTLGL True PC9_epitope_Rep6 965.51819600361 965.51708993586 73.853 2 0.20273384173710862 0.0004751158094785604 0.000896645903530254 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 84903 5988 QEDAQRLYQA True H1975_Epitope_Rep2 1220.57856441404 1220.57746993586 28.011 2 0.20272529843152812 0.0004751158094785604 0.0008968223050500461 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 88596 11319 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51807496793 48.517 1 0.20272406280838381 0.0004751158094785604 0.0008968478209831863 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 97352 7969 SEDEWTSQA True H1975_Epitope_Rep3 1051.40943340027 1051.4083299358601 35.624 2 0.20272404053734902 0.0004751158094785604 0.0008968482808924163 ['ENSG00000179409|ENST00000319004|GEMIN4'] 12142 10119 DIDTRSEFY True H1975_Epitope_Rep2 1144.5036681382799 1144.50256993586 43.919 2 0.20271630684059633 0.0004751158094785604 0.0008970080003268794 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 24051 15634 EYNNNFHVL True PC9_epitope_Rep5 1148.5250722892001 1148.5239699358601 65.147 2 0.20271497978265027 0.0004751158094785604 0.0008970354101321098 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 15651 7322 EATDVIIIHSK True NCI_RA007_Epitope_Rep1 1224.67140216972 1224.66976490379 32.473 3 0.20271449435571157 0.0004751158094785604 0.0008970454366244395 ['ENSG00000166825|ENST00000300060|ANPEP'] 13251 14068 DLSSVQTLLTK True NCI_RA007_Epitope_Rep1 1203.6710678165498 1203.66996993586 58.751 2 0.2026957041695115 0.0004751158094785604 0.0008974336342760403 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 138603 7245 YIDQEELNK True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 33.256 2 0.20269366997339777 0.0004751158094785604 0.0008974756700519739 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 117994 9276 TYDNVHQQF True PC9_epitope_Rep5 1150.5043368446202 1150.5032299358602 40.629 2 0.20269130066827684 0.0004751158094785604 0.000897524633199073 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 42040 10570 IDIIPNPQER True NCI_RA007_Epitope_Rep1 1193.64043639461 1193.6393299358601 45.098 2 0.20269109241756922 0.0004751158094785604 0.000897528936956083 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 90223 7045 REDWKIIRA True H1975_Epitope_Rep3 1185.66184054553 1185.66019490379 32.064 3 0.2026879203647904 0.0004751158094785604 0.0008975944938870299 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 86005 11746 QHLQATGVSL True PC9_epitope_Rep5 1052.56145779792 1052.56036993586 50.18 2 0.20268250388934478 0.0004751158094785604 0.0008977064474857123 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 105490 20907 SRYLYTLVI True PC9_epitope_Rep5 1126.6386454894598 1126.63754993586 85.474 2 0.2026808380965723 0.0004751158094785604 0.0008977408807161806 ['ENSG00000172809|ENST00000311111|RPL38'] 21441 15050 ERISLQQEL True PC9_epitope_Rep3 1114.59823722946 1114.5971499358602 63.02 2 0.20267940737556187 0.0004751158094785604 0.0008977704558882106 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 99238 5717 SHMEGVASV True PC9_epitope_Rep6 915.4120166829099 915.41090993586 30.138 2 0.2026790208670065 0.0004751158094785604 0.000897778445773591 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 68121 11619 LTDPIQGTEY True H1975_Epitope_Rep2 1135.53971929383 1135.5386299358602 49.759 2 0.20267884818239912 0.0004751158094785604 0.0008977820155241445 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 90610 4965 REMPVKVEA True H1975_Epitope_Rep2 1057.5590152697698 1057.5579099358602 24.181 2 0.20266143316356466 0.0004751158094785604 0.0008981420933630886 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 68159 8258 LTDRELEEY True H1975_Epitope_Rep2 1166.54553295026 1166.54442993586 36.716 2 0.20265841138591717 0.0004751158094785604 0.0008982045872352097 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 29411 10484 FVDPYPVNKY True H1975_Epitope_Rep3 1240.6128246644398 1240.61172993586 45.389 2 0.20264713796991965 0.0004751158094785604 0.0008984377730634723 ['ENSG00000174010|ENST00000328046|KLHL15'] 64875 9101 LQDYFDGNLKR True NCI_RA007_Epitope_Rep1 1367.68336383575 1367.68171490379 39.403 3 0.20263078569987011 0.0004751158094785604 0.0008987761207499327 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 49250 5125 KEQEPM[Oxidation]PTV True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 24.789 2 0.20263060547994732 0.0004751158094785604 0.0008987798504238693 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2'] 95852 18545 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.6263299358602 76.123 2 0.20262673830664488 0.0004751158094785604 0.0008988598858015366 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 78176 17523 NYATGQWTRF True PC9_epitope_Rep1 1242.57817049122 1242.5770699358602 72.197 2 0.2026222776526737 0.0004751158094785604 0.0008989522127882412 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 88668 12659 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep2 1318.5751192068199 1318.5740299358602 53.79 2 0.20261908898863173 0.0004751158094785604 0.000899018217851484 ['ENSG00000167325|ENST00000300738|RRM1'] 85022 8149 QEHITTVVV True H1975_Epitope_Rep2 1024.5553097883198 1024.5542099358602 36.295 2 0.20261067890463982 0.0004751158094785604 0.0008991923291631464 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114438859-114442862:-|nuORF'] 108685 14908 SYQRAFNEF True PC9_epitope_Rep3 1160.5250722892 1160.5239699358601 62.479 2 0.20260965846709567 0.0004751158094785604 0.0008992134572598184 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 117592 6620 TVSSLQESGLK True NCI_RA007_Epitope_Rep1 1147.60846755999 1147.60736993586 29.762 2 0.20260965105959325 0.0004751158094785604 0.0008992136106335203 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 91069 19395 RFLNDPGHLLW True PC9_epitope_Rep4 1366.7146043943799 1366.71295490379 82.713 3 0.20260783994924284 0.0004751158094785604 0.0008992511107945975 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 47749 21152 IYEIIDNSQGF True PC9_epitope_Rep5 1297.6190322436898 1297.61792993586 86.414 2 0.20260695872291598 0.0004751158094785604 0.0008992693576985361 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 118009 17663 TYDYNFHSF True PC9_epitope_Rep2 1192.48253877088 1192.4814499358602 73.221 2 0.20260678907866492 0.0004751158094785604 0.0008992728704396109 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 31617 2623 GEFEKKYVA True NCI_RA007_Epitope_Rep3 1069.5444107514497 1069.5433099358602 14.779 2 0.2025843751198074 0.0004751158094785604 0.0008997371064463151 ['ENSG00000132341|ENST00000543796|RAN'] 93360 9515 RPYQPLPEA True PC9_epitope_Rep2 1069.55564414149 1069.5545499358602 41.947 2 0.20257647724346986 0.0004751158094785604 0.0008999007438525658 ['ENSG00000165476|ENST00000373758|REEP3'] 118912 10134 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47587496793 43.979 1 0.20257515216632058 0.0004751158094785604 0.0008999282012692129 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 141418 7332 YTERAVFRY True H1975_Epitope_Rep1 1203.6036569630699 1203.6020249037902 33.211 3 0.20257387104978408 0.0004751158094785604 0.0008999547485605555 ['ENSG00000104142|ENST00000220509|VPS18'] 74503 14266 NFGIGQDIQPK True PC9_epitope_Rep3 1215.62478633047 1215.62368993586 59.958 2 0.2025625441530073 0.0004751158094785604 0.0009001894986415432 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 111147 21945 THFNFAIVF True PC9_epitope_Rep1 1094.5549158654999 1094.55380993586 89.229 2 0.20254497225260795 0.0004751158094785604 0.0009005537980509132 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 39140 9218 HHYSGNNIEL True PC9_epitope_Rep1 1182.5417849825 1182.5406899358602 40.309 2 0.20254298809910087 0.0004751158094785604 0.0009005949426724463 ['ENSG00000156482|ENST00000287038|RPL30'] 31170 11904 GAYGKVFLV True H1975_Epitope_Rep2 952.5382031721999 952.53710993586 50.868 2 0.2025371925628014 0.0004751158094785604 0.0009007151332571144 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'RPS6KA5|p.S448Vfs*9|1|0.24|ENSG00000100784|chr14:90900145-90900145|T/-|frameshift_variant', 'ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 127307 11280 VMEKSFLEY True H1975_Epitope_Rep3 1144.5474475265598 1144.54634993586 48.494 2 0.20253547271852562 0.0004751158094785604 0.0009007508032999876 ['ENST00000513342.5_1_17:46990150-47004493:+|nuORF', 'nc|ENSG00000159202|Q9H832-2|UBE2Z', 'ENSG00000159202|ENST00000360943|UBE2Z'] 114823 21586 TQLNMFQTL True PC9_epitope_Rep5 1094.54303085246 1094.54192993586 88.071 2 0.20251387432312437 0.0004751158094785604 0.0009011988805938498 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 11823 17721 DHFRLGSVL True PC9_epitope_Rep5 1042.55597849466 1042.55488993586 73.18 2 0.20250797692065195 0.0004751158094785604 0.000901321266131869 ['ENSG00000158435|ENST00000289382|CNOT11'] 113062 10250 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep5 1189.6376598937302 1189.63656993586 46.058 2 0.20250661325157854 0.0004751158094785604 0.0009013495679762351 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 75134 9963 NHYNNIM[Oxidation]AL True PC9_epitope_Rep2 1104.50222905008 1104.50112993586 43.653 2 0.20250632881280026 0.0004751158094785604 0.00090135547138447 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 17679 15899 EHLQVITTL True PC9_epitope_Rep4 1052.5866099166 1052.58550993586 69.085 2 0.2024995531825877 0.0004751158094785604 0.0009014961082291841 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 31323 10773 GDLGIEIPAEK True NCI_RA007_Epitope_Rep5 1140.60265390356 1140.60154993586 48.073 2 0.20249588989225142 0.0004751158094785604 0.0009015721536571736 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 37871 20202 GYPLWKVTF True PC9_epitope_Rep4 1109.59096702105 1109.5898699358602 85.844 2 0.2024958411204 0.0004751158094785604 0.0009015731661445697 ['ENSG00000198805|ENST00000361505|PNP'] 65016 20345 LQIEDFEARI True PC9_epitope_Rep2 1232.6401020414398 1232.63900993586 83.679 2 0.2024944227697506 0.0004751158094785604 0.0009016026111306311 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 28180 21683 FRDYFPIQL True PC9_epitope_Rep1 1197.6182443980497 1197.6171499358602 88.231 2 0.20249367570418939 0.0004751158094785604 0.0009016181206134848 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 96628 15409 SAIDRIFTL True H1975_Epitope_Rep2 1034.5760452329 1034.57494993586 64.429 2 0.20249175583214604 0.0004751158094785604 0.0009016579794171619 ['ENSG00000183576|ENST00000331768|SETD3'] 107974 15236 SVYVQLEKV True PC9_epitope_Rep3 1063.5913609438699 1063.59026993586 63.754 2 0.20249167344758404 0.0004751158094785604 0.0009016596898571967 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 29081 19892 FTIFRTISV True PC9_epitope_Rep4 1082.6124307416198 1082.61132993586 84.647 2 0.2024843028037477 0.0004751158094785604 0.0009018127298084555 ['ENSG00000105447|ENST00000253237|GRWD1'] 37921 8281 GYSFTTTAER True PC9_epitope_Rep6 1131.51965255559 1131.5185499358602 41.463 2 0.20247762935341831 0.0004751158094785604 0.0009019513160941059 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 23885 16524 EYIRSLNQF True PC9_epitope_Rep5 1168.58767254576 1168.58656993586 68.56 2 0.20247272152555706 0.0004751158094785604 0.0009020532496614509 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 115180 5972 TRDPQFQKL True PC9_epitope_Rep4 1131.6036569630699 1131.6020249037902 29.917 3 0.20247097113878781 0.0004751158094785604 0.0009020896072703624 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 111434 19629 THSQFIVVSL True PC9_epitope_Rep2 1129.6131590176099 1129.61206993586 80.887 2 0.2024616939544928 0.0004751158094785604 0.0009022823299293886 ['ENSG00000136824|ENST00000374793|SMC2'] 54737 7159 KYMEDYHQF True NCI_RA007_Epitope_Rep3 1259.52810906431 1259.5264649037902 35.277 3 0.20245547439627928 0.0004751158094785604 0.0009024115571031932 ['ENSG00000118898|ENST00000345988|PPL'] 97256 12149 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.4596499358602 51.748 2 0.2024447906772497 0.0004751158094785604 0.0009026335819283119 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 58866 7807 LESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep1 1117.51139675145 1117.51028993586 34.358 2 0.2024338882983694 0.0004751158094785604 0.0009028602073378013 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 91556 16993 RIIDVVYNA True PC9_epitope_Rep5 1061.58694426977 1061.58584993586 70.383 2 0.20241706986737917 0.0004751158094785604 0.0009032099203791216 ['ENSG00000142937|ENST00000396651|RPS8'] 71457 19220 LYTPVLIRF True PC9_epitope_Rep6 1120.66446631448 1120.6633699358601 86.582 2 0.20241598158756327 0.0004751158094785604 0.0009032325541399891 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 41373 7430 HYAHLIKTF True NCI_RA007_Epitope_Rep4 1128.6080140675201 1128.60637490379 35.224 3 0.20241308217229717 0.0004751158094785604 0.0009032928582021766 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1', 'ENST00000495574.1_1_10:129046289-129055694:+|nuORF', 'ENST00000484400.5_1_10:129046280-129142589:+|nuORF'] 13102 14817 DLQNVNITLR True PC9_epitope_Rep6 1184.65133543148 1184.6502299358601 68.965 2 0.20241278394831172 0.0004751158094785604 0.0009032990611017879 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1', 'ENST00000420550.1_1_1:224044699-224045026:-|nuORF'] 28109 19556 FQYESKVFYL True PC9_epitope_Rep4 1322.6546894764197 1322.65358993586 83.344 2 0.2024071354172499 0.0004751158094785604 0.0009034165555990047 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 107368 21089 SVLKELLQV True PC9_epitope_Rep1 1027.6277464525897 1027.62664993586 85.948 2 0.2023940583915658 0.0004751158094785604 0.0009036886282518556 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2'] 73067 12709 MRDPTFVRL True PC9_epitope_Rep4 1133.60154878809 1133.59990490379 56.74 3 0.20238620012530245 0.0004751158094785604 0.0009038521620947946 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 78603 19582 NYSNIRFQF True PC9_epitope_Rep5 1187.57235683479 1187.5712499358601 80.374 2 0.20236592874047085 0.0004751158094785604 0.0009042741552362319 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 106185 8066 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 35.973 2 0.20235955947627443 0.0004751158094785604 0.0009044067861725137 ['ENSG00000114315|ENST00000232424|HES1'] 109884 4634 TEEYPNKPP True H1975_Epitope_Rep3 1073.5029398622898 1073.50184993586 22.946 2 0.2023571136789245 0.0004751158094785604 0.0009044577216343661 ['ENSG00000077721|ENST00000371558|UBE2A'] 120068 10693 VDTFLEDVK True H1975_Epitope_Rep1 1064.5389910178399 1064.5378899358602 46.089 2 0.2023544595041919 0.0004751158094785604 0.0009045129999580809 ['CON__P34955'] 129379 9399 VRDQTELRL True PC9_epitope_Rep5 1128.62512068364 1128.6234749037899 41.108 3 0.20235439948261427 0.0004751158094785604 0.0009045142500627355 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1'] 48241 11923 IYQKAFEHL True PC9_epitope_Rep1 1147.6025943339098 1147.60093490379 50.727 3 0.20235236153097838 0.0004751158094785604 0.0009045566967068755 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 54781 19470 KYNDNFFGL True PC9_epitope_Rep4 1116.5240096600398 1116.52290993586 83.007 2 0.2023476048504799 0.0004751158094785604 0.0009046557770594171 ['ENSG00000012963|ENST00000013070|UBR7'] 49047 6409 KEGKPPISVKF True H1975_Epitope_Rep2 1228.7179584393195 1228.7163149037901 29.576 3 0.20234636970858194 0.0004751158094785604 0.0009046815065071392 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 8850 6510 AVFDGAQVTSK True NCI_RA007_Epitope_Rep3 1121.57168812845 1121.5705899358602 32.645 2 0.20234178340613213 0.0004751158094785604 0.0009047770509640543 ['ENSG00000175274|ENST00000525680|TP53I11'] 104247 11547 SQIDPSSIERA True PC9_epitope_Rep1 1201.5938801250102 1201.59278993586 49.294 2 0.20232929395134736 0.0004751158094785604 0.0009050372896875459 ['ENSG00000100393|ENST00000263253|EP300'] 26870 7920 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.56622993586 35.412 2 0.2023248914787693 0.0004751158094785604 0.0009051290404770858 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 142498 15758 YYIFIPSKF True NCI_RA007_Epitope_Rep4 1176.6219327961599 1176.62082993586 68.436 2 0.2023215438770476 0.0004751158094785604 0.000905198813220473 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 14990 22137 DYILNVMKF True PC9_epitope_Rep1 1141.58416738845 1141.58306993586 89.963 2 0.2023140265492311 0.0004751158094785604 0.0009053555135802532 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 29722 6794 FVM[Oxidation]QEEFSR True H1975_Epitope_Rep1 1187.5281094447498 1187.5270099358602 31.176 2 0.20231051735907704 0.0004751158094785604 0.000905428672739064 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 34763 9611 GQFQGRPVSV True PC9_epitope_Rep1 1073.5617921510898 1073.5606899358602 41.825 2 0.2023071469838239 0.0004751158094785604 0.0009054989434842613 ['ENSG00000261150|ENST00000615648|EPPK1'] 54340 14643 KYEELFPAF True NCI_RA007_Epitope_Rep3 1142.5648118428596 1142.56370993586 64.965 2 0.2023061800229352 0.0004751158094785604 0.0009055191051755858 ['ENSG00000105402|ENST00000263354|NAPA'] 36629 16017 GVIDLIFEK True NCI_RA007_Epitope_Rep4 1032.58554728744 1032.5844499358602 69.48 2 0.20230587823551904 0.0004751158094785604 0.0009055253977091779 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 67400 5234 LSSPATLNSR True NCI_RA007_Epitope_Rep5 1044.5563724174801 1044.55526993586 26.83 2 0.20227268632643056 0.0004751158094785604 0.0009062177460056306 ['CON__P00761'] 27103 19006 FLHDNMVEI True PC9_epitope_Rep1 1116.52738078832 1116.5262899358602 77.895 2 0.20227263347676944 0.0004751158094785604 0.000906218848817197 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'ENST00000593099.5_1_17:33324760-33324883:+|nuORF'] 90864 9865 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 42.932 3 0.2022709510446473 0.0004751158094785604 0.0009062539567581933 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 122064 22401 VFYPYPQYF True PC9_epitope_Rep1 1222.5698972232997 1222.5688099358601 90.985 2 0.20226678476308252 0.0004751158094785604 0.0009063409019873279 ['ENSG00000103160|ENST00000219439|HSDL1'] 87932 19845 QRLETILSL True PC9_epitope_Rep2 1071.62880908175 1071.6277099358601 81.725 2 0.20226068501742991 0.0004751158094785604 0.0009064682113515655 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 31941 4929 GENPIYKSA True NCI_RA007_Epitope_Rep5 977.4818104948899 977.48070993586 25.661 2 0.20226041957619825 0.0004751158094785604 0.0009064737518511655 ['ENSG00000150093|ENST00000302278|ITGB1'] 137556 11012 YEELQSLAGK True PC9_epitope_Rep4 1136.5713537752797 1136.5702499358601 50.134 2 0.20225718442659368 0.0004751158094785604 0.0009065412811854042 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 68300 7346 LTEIIASR True NCI_RA007_Epitope_Rep2 901.5232813840499 901.52218993586 33.197 2 0.20225197729300443 0.0004751158094785604 0.0009066499835914176 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 40821 7586 HSDPESDFY True H1975_Epitope_Rep3 1095.41451878071 1095.4134299358602 34.16 2 0.20224278112523675 0.0004751158094785604 0.0009068419916936879 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 42469 6707 IEEDKWRVA True H1975_Epitope_Rep2 1144.5876725457601 1144.58656993586 30.71 2 0.2022395960829594 0.0004751158094785604 0.0009069085021552281 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'STARD4|p.K33M|1|0.13|ENSG00000164211|chr5:111507336-111507336|T/A|missense_variant', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'ENSG00000164211|ENST00000296632|STARD4'] 106431 5499 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 28.634 3 0.2022341441970867 0.0004751158094785604 0.0009070223604906159 ['ENSG00000058729|ENST00000283109|RIOK2'] 109820 6803 TEEGPTLSYGR True H1975_Epitope_Rep1 1208.567331024 1208.56622993586 31.21 2 0.20223134190093506 0.0004751158094785604 0.0009070808898133496 ['ENSG00000015479|ENST00000394805|MATR3'] 130946 4372 VTDKNPAGDY True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 21.929 2 0.20222703114458512 0.0004751158094785604 0.0009071709325356494 ['ENSG00000196663|ENST00000359520|TECPR2', 'ENST00000559124.1_1_14:102963896-102964591:+|nuORF'] 15342 5103 EAGEQGDIEPR True PC9_epitope_Rep5 1199.5418445521498 1199.54074993586 24.655 2 0.20221703445536363 0.0004751158094785604 0.0009073797770551995 ['ENSG00000145907|ENST00000356245|G3BP1'] 43195 21993 IFIDPGYQTF True PC9_epitope_Rep1 1199.58627556343 1199.5851699358602 89.417 2 0.20221688417184067 0.0004751158094785604 0.0009073829170515637 ['ENSG00000121741|ENST00000610343|ZMYM2'] 113745 5977 TM[Oxidation]DNPTTTQY True H1975_Epitope_Rep2 1186.48121882198 1186.48012993586 27.969 2 0.20220891781174913 0.0004751158094785604 0.0009075493803195724 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 15271 6248 EAESSPFVER True NCI_RA007_Epitope_Rep3 1149.5302172392899 1149.52912993586 31.581 2 0.20220661002815643 0.0004751158094785604 0.0009075976089676812 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 43446 10788 IGGIGTVPVGR True PC9_epitope_Rep6 1024.6029286870798 1024.60182993586 52.331 2 0.20220230446042234 0.0004751158094785604 0.0009076875946882639 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 116279 9115 TTDGKLPEV True PC9_epitope_Rep2 958.4971262058599 958.49602993586 40.401 2 0.20219279848311367 0.0004751158094785604 0.0009078862998785568 ['ENSG00000149257|ENST00000358171|SERPINH1'] 112489 11447 TLDNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1190.6216754764198 1190.6205699358602 49.151 2 0.2021903806006946 0.0004751158094785604 0.0009079368482784231 ['CON__P00761', 'nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 72503 9196 MLDSHEELY True H1975_Epitope_Rep3 1135.48557554599 1135.48446993586 40.364 2 0.20218619627592188 0.0004751158094785604 0.0009080243327011601 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 77149 14541 NRPNLYYEV True PC9_epitope_Rep1 1166.57202248162 1166.57092993586 60.756 2 0.2021799568538987 0.0004751158094785604 0.0009081548000932476 ['ENSG00000004700|ENST00000444129|RECQL'] 139160 6463 YLDYHM[Oxidation]EKY True H1975_Epitope_Rep1 1276.5434251557201 1276.5417749037902 29.922 3 0.20216875587496694 0.0004751158094785604 0.0009083890616710901 ['ENSG00000214435|ENST00000369880|AS3MT', 'ENST00000299353.6_1_10:104622682-104660454:+|nuORF'] 99305 7687 SHSELIHNL True PC9_epitope_Rep2 1048.5301576696402 1048.5290699358602 34.936 2 0.20216754232166498 0.0004751158094785604 0.0009084144460298649 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 28545 12132 FSEPRAIFY True H1975_Epitope_Rep3 1128.56039516876 1128.55928993586 51.833 2 0.20216749832563002 0.0004751158094785604 0.0009084153663251262 ['ENSG00000123143|ENST00000242783|PKN1', 'nc|ENSG00000123143|Q16512-2|PKN1'] 142334 11499 YYEEQHPEL True PC9_epitope_Rep3 1206.5193182024198 1206.51822993586 49.232 2 0.2021641402273068 0.0004751158094785604 0.0009084856127323503 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 90485 6994 RELEDDARVIA True H1975_Epitope_Rep2 1285.6626283911698 1285.66099490379 31.825 3 0.20216016534667083 0.0004751158094785604 0.0009085687683464881 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 3417 12413 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5851699358602 52.781 2 0.20215789644919305 0.0004751158094785604 0.0009086162377384048 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 46680 8827 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.54912993586 38.96 2 0.2021511106579238 0.0004751158094785604 0.0009087582234695463 ['ENSG00000170348|ENST00000303575|TMED10'] 105694 13926 SSENPWMTEY True H1975_Epitope_Rep2 1242.48630382198 1242.4852099358602 58.714 2 0.2021494641260276 0.0004751158094785604 0.0009087926788175851 ['nc|ENSG00000154429|Q6IQ19-2|CCSAP', 'ENST00000483092.1_1_1:229460984-229462796:-|nuORF', 'ENSG00000154429|ENST00000284617|CCSAP'] 7139 9035 AQYDGAYKV True PC9_epitope_Rep1 1013.4818104948899 1013.48070993586 39.603 2 0.20214924614159316 0.0004751158094785604 0.0009087972404609302 ['ENST00000480626.5_1_3:58417333-58419536:-|nuORF', 'ENST00000469827.1_1_3:58417358-58419536:-|nuORF', 'ENST00000482894.5_1_3:58417133-58419536:-|nuORF', 'nc|ENSG00000168291|P11177-3|PDHB', 'nc|ENSG00000168291|P11177-2|PDHB', 'ENSG00000168291|ENST00000302746|PDHB'] 71421 12145 LYTEKFEEF True NCI_RA007_Epitope_Rep2 1204.5652057656796 1204.5641099358602 51.836 2 0.20214014259434285 0.0004751158094785604 0.0009089877660188986 ['ENSG00000084652|ENST00000373610|TXLNA'] 131149 5702 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.52347496793 26.929 1 0.20213572828755427 0.0004751158094785604 0.000909080166215516 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 140831 4714 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 23.258 2 0.20212885095085575 0.0004751158094785604 0.0009092241412850942 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 72658 4684 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 23.113 2 0.20212387856460867 0.0004751158094785604 0.0009093282510084892 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 7187 10337 AQYEHDLEV True PC9_epitope_Rep4 1102.4931034545798 1102.49200993586 47.453 2 0.2021198409891244 0.0004751158094785604 0.0009094127968547311 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 137817 5545 YEQSAQAAQQV True H1975_Epitope_Rep2 1221.56257999673 1221.5614899358602 26.336 2 0.20210461956421233 0.0004751158094785604 0.0009097316006742287 ['ENSG00000196878|ENST00000356082|LAMB3'] 128421 7966 VPRQPTVTSV True PC9_epitope_Rep2 1082.60840799034 1082.60730993586 36.006 2 0.20210208161467497 0.0004751158094785604 0.0009097847674409152 ['ENSG00000163110|ENST00000317968|PDLIM5'] 90469 6594 RELAQQVQQVA True NCI_RA007_Epitope_Rep3 1268.68369818892 1268.68260993586 32.996 2 0.2020978341696967 0.0004751158094785604 0.0009098737529024834 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 31326 16439 GDLGIEIPAEK True PC9_epitope_Rep3 1140.60265390356 1140.60154993586 68.37 2 0.20209429916307797 0.0004751158094785604 0.0009099478191864426 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 96973 11625 SAYEFYHAL True NCI_RA007_Epitope_Rep3 1099.49746055903 1099.49636993586 52.847 2 0.20208530473789788 0.0004751158094785604 0.0009101362997508524 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 46674 9041 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 39.729 2 0.20208065992395144 0.0004751158094785604 0.0009102336483895084 ['ENSG00000170348|ENST00000303575|TMED10'] 41084 7566 HTQGPVDGSLY True H1975_Epitope_Rep2 1172.5462016565998 1172.5451099358602 34.057 2 0.2020800453510245 0.0004751158094785604 0.0009102465297389133 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 87804 18934 QRDVLLTEL True PC9_epitope_Rep5 1085.60807363717 1085.6069699358602 77.853 2 0.2020791786726154 0.0004751158094785604 0.0009102646954892684 ['ENSG00000124659|ENST00000372876|TBCC'] 45470 20883 IQLPSEKAIFL True PC9_epitope_Rep1 1257.7332741502898 1257.7321699358602 85.146 2 0.2020775687683616 0.0004751158094785604 0.0009102984403649175 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 14028 14375 DRIKDEFQL True PC9_epitope_Rep2 1162.59823722946 1162.5971499358602 60.554 2 0.20207744317973975 0.0004751158094785604 0.0009103010728552344 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 14679 13117 DVIEEYFK True H1975_Epitope_Rep1 1041.50187723313 1041.5007899358602 55.546 2 0.2020766649029654 0.0004751158094785604 0.0009103173866536195 ['ENSG00000112306|ENST00000230050|RPS12'] 70544 19463 LVYPEELKPVL True PC9_epitope_Rep4 1298.74858986126 1298.7474899358601 82.981 2 0.20207441583912245 0.0004751158094785604 0.0009103645319083185 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 115332 15206 TRIGLETSL True PC9_epitope_Rep3 988.55530978832 988.55420993586 63.636 2 0.20205647667815527 0.0004751158094785604 0.0009107406632959292 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 78634 20013 NYTDIKDYL True PC9_epitope_Rep1 1143.54480467427 1143.54370993586 81.805 2 0.2020543707177093 0.0004751158094785604 0.0009107848293075547 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 924 7365 ADMGHLKY True H1975_Epitope_Rep3 933.43783750793 933.43674993586 33.305 2 0.20204741904762646 0.0004751158094785604 0.0009109306343520005 ['ENSG00000132646|ENST00000379143|PCNA'] 109659 10668 TEAPVPVSV True H1975_Epitope_Rep2 897.4807478657299 897.4801949679301 46.06 1 0.20203385540391622 0.0004751158094785604 0.0009112151870156949 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 104261 17962 SQIEADFRL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 74.395 2 0.20203368006365213 0.0004751158094785604 0.0009112188660754165 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 142735 15549 YYQHIVTTL True PC9_epitope_Rep1 1136.5866099166 1136.58550993586 64.634 2 0.20202713495587807 0.0004751158094785604 0.0009113562088089547 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 71913 14806 M[Oxidation]EQISQFLQAA True H1975_Epitope_Rep3 1280.60708804144 1280.6059899358602 62.331 2 0.20202460281171222 0.0004751158094785604 0.0009114093489661846 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 134804 23041 VYTVVDEMFL True PC9_epitope_Rep2 1214.5893123385397 1214.58820993586 94.12 2 0.2020179615243144 0.0004751158094785604 0.0009115487393090427 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 137217 19805 YAYFNFPEL True H1975_Epitope_Rep2 1162.5335117145798 1162.5324099358602 82.158 2 0.20200571348410523 0.0004751158094785604 0.0009118058627942927 ['ENSG00000137628|ENST00000393743|DDX60'] 120630 9028 VEIEDINDHTP True H1975_Epitope_Rep2 1280.5884603913998 1280.5873699358601 39.678 2 0.20200517978718713 0.0004751158094785604 0.0009118170683638734 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 142508 21245 YYIFIPSKF True PC9_epitope_Rep5 1176.6219327961599 1176.62082993586 86.769 2 0.20199962383148218 0.0004751158094785604 0.0009119337301325275 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 90262 5827 REEFLERAA True H1975_Epitope_Rep3 1119.5672714543498 1119.5661699358602 27.434 2 0.2019930500896648 0.0004751158094785604 0.0009120717823081986 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1'] 84195 16515 PYLDKFFTL True NCI_RA007_Epitope_Rep3 1142.6011973515801 1142.60010993586 72.76 2 0.20198507811980634 0.0004751158094785604 0.0009122392261605258 ['ENSG00000130158|ENST00000294618|DOCK6'] 142552 12968 YYLNDLERI True NCI_RA007_Epitope_Rep3 1197.6029882567298 1197.60188993586 58.283 2 0.20198309150376598 0.0004751158094785604 0.0009122809579913974 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 47910 11435 IYIKHPHLF True PC9_epitope_Rep6 1166.66004964038 1166.6584049037901 55.047 3 0.2019790986428636 0.0004751158094785604 0.0009123648397774706 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 98041 9266 SEQLDLPVRQA True H1975_Epitope_Rep1 1254.65681473474 1254.6557099358602 40.553 2 0.20197806253355297 0.0004751158094785604 0.0009123866075647437 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 97436 8320 SEEEISFRA True H1975_Epitope_Rep1 1066.49310345458 1066.49200993586 36.934 2 0.20197107448705287 0.0004751158094785604 0.0009125334341627046 ['ENSG00000162928|ENST00000295030|PEX13'] 14396 10238 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.5496349037899 44.324 3 0.20197076330144723 0.0004751158094785604 0.0009125399730681137 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 142556 19699 YYLNDLERI True PC9_epitope_Rep2 1197.6029882567298 1197.60188993586 81.16 2 0.2019677290623992 0.0004751158094785604 0.0009126037336285252 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 72541 20644 MLLDVMHTV True PC9_epitope_Rep1 1057.5300236406101 1057.52892993586 84.228 2 0.2019591131648217 0.0004751158094785604 0.000912784809792777 ['nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN'] 49345 8936 KESDIYIVA True NCI_RA007_Epitope_Rep3 1036.54407639828 1036.5429699358601 42.235 2 0.20195670881437675 0.0004751158094785604 0.0009128353472972678 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 118385 16799 TYNYPVHYF True PC9_epitope_Rep4 1202.53965972418 1202.53856993586 72.588 2 0.2019565898802981 0.0004751158094785604 0.0009128378472683864 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 105613 9504 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4603699358602 41.526 2 0.20195465371844296 0.0004751158094785604 0.0009128785459784806 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 31749 7667 GEHGLIIRV True NCI_RA007_Epitope_Rep3 992.57671393924 992.57560993586 37.279 2 0.20194813520081673 0.0004751158094785604 0.0009130155805764651 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 69577 9188 LVDGYNVHY True H1975_Epitope_Rep3 1078.5083595959002 1078.5072699358602 40.332 2 0.20194435329029933 0.0004751158094785604 0.0009130950947027557 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB', 'ENST00000538021.5_2_11:72004413-72018253:-|nuORF'] 47720 20194 IYDKFIAQL True PC9_epitope_Rep3 1109.6120963884498 1109.61098993586 82.935 2 0.20193532691879337 0.0004751158094785604 0.0009132849009404689 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 84243 20990 PYMDSPQSIGF True PC9_epitope_Rep5 1240.5434247752798 1240.5423299358602 85.8 2 0.20193522438766412 0.0004751158094785604 0.0009132870571889072 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 72500 9091 MLDSHEELY True H1975_Epitope_Rep2 1135.48557554599 1135.48446993586 39.919 2 0.20192889833994948 0.0004751158094785604 0.0009134201050081284 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 17533 19621 EHGIVVFSL True PC9_epitope_Rep4 999.5389314481899 999.53782993586 83.589 2 0.20191763924055034 0.0004751158094785604 0.0009136569516006536 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 48095 7971 IYNGDM[Oxidation]EKI True PC9_epitope_Rep1 1097.50631137101 1097.5052099358602 35.482 2 0.20191269416247018 0.0004751158094785604 0.0009137609958075875 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 136812 16439 YAAELIERV True PC9_epitope_Rep5 1062.57095985246 1062.5698699358602 68.231 2 0.20191151291969114 0.0004751158094785604 0.0009137858508575778 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 121630 18430 VFHPSQDLVF True PC9_epitope_Rep4 1187.5975089534697 1187.59640993586 78.96 2 0.20190738155453403 0.0004751158094785604 0.0009138727860660121 ['ENSG00000110107|ENST00000227524|PRPF19'] 106273 8442 STETHEELLY True H1975_Epitope_Rep2 1220.55609763396 1220.5550099358602 37.422 2 0.2019043975399831 0.0004751158094785604 0.0009139355830429895 ['ENSG00000110717|ENST00000313468|NDUFS8'] 72228 12001 MHFESGSTL True PC9_epitope_Rep1 1007.43823143075 1007.43712993586 51.024 2 0.20188989552539532 0.0004751158094785604 0.0009142408317501671 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 4244 11693 AIDQLHLEY True H1975_Epitope_Rep1 1100.5502244078798 1100.54912993586 49.968 2 0.20187809093647485 0.0004751158094785604 0.0009144893786159359 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 108689 12281 SYQRAFNEF True PC9_epitope_Rep6 1160.5250722892 1160.5239699358601 58.625 2 0.20187496239329128 0.0004751158094785604 0.0009145552617826632 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 74170 5092 NEEEIRANVA True H1975_Epitope_Rep1 1143.55201531303 1143.55090993586 24.657 2 0.20187212783792544 0.0004751158094785604 0.000914614958047861 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 16870 12161 EFGPVVIDYGK True H1975_Epitope_Rep3 1222.6233893481397 1222.6222899358602 51.948 2 0.20187020719028897 0.0004751158094785604 0.0009146554094668125 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 68119 11587 LTDPIQGTEY True H1975_Epitope_Rep1 1135.53971929383 1135.5386299358602 49.556 2 0.20186503970244804 0.0004751158094785604 0.0009147642526100215 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 133809 12572 VYFSKSEQL True PC9_epitope_Rep5 1099.5549754351498 1099.5538699358601 53.358 2 0.20186040819944004 0.0004751158094785604 0.0009148618173079242 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant'] 118070 13479 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.54357496793 59.054 1 0.20185978203601826 0.0004751158094785604 0.0009148750085234122 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 95993 18009 RYLMDPDTF True PC9_epitope_Rep4 1156.52229540788 1156.52118993586 77.33 2 0.20185678046629146 0.0004751158094785604 0.0009149382444301959 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 129088 11944 VQPSKYHFL True PC9_epitope_Rep5 1117.5920296502102 1117.59092993586 50.941 2 0.20185002662091558 0.0004751158094785604 0.0009150805478547755 ['ENSG00000177383|ENST00000317897|MAGEF1'] 9310 6949 AVQQPFINK True NCI_RA007_Epitope_Rep2 1043.5763795860698 1043.5752899358602 31.649 2 0.20184982446996358 0.0004751158094785604 0.000915084807514553 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 26189 21180 FHDGFLLEV True PC9_epitope_Rep5 1075.53384606775 1075.53274993586 86.52 2 0.20184969382949466 0.0004751158094785604 0.0009150875603390324 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF', 'CEP76|p.V235Cfs*17|1|0.48|ENSG00000101624|chr18:12697227-12697228|-/C|frameshift_variant'] 48187 19086 IYPSKWIARL True PC9_epitope_Rep5 1245.7233781729299 1245.7217249037901 78.444 3 0.2018444828809091 0.0004751158094785604 0.0009151973709651324 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'ENST00000569930.1_1_16:2133412-2138608:+|nuORF'] 9508 5353 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 28.446 2 0.2018375233511031 0.0004751158094785604 0.0009153440501589146 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 9761 15549 AYIERMNYI True PC9_epitope_Rep4 1171.5695799534699 1171.56848993586 67.732 2 0.2018305253680681 0.0004751158094785604 0.0009154915635672737 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 14307 7258 DSYDSYATHNE True PC9_epitope_Rep4 1300.48438924568 1300.48328993586 35.227 2 0.20182209079612204 0.0004751158094785604 0.0009156693911210811 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF'] 95297 6391 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.6641699358602 31.254 2 0.20182191702917554 0.0004751158094785604 0.0009156730550441593 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 107568 9087 SVPEGPWWRK True NCI_RA007_Epitope_Rep5 1240.63529144452 1240.6336349037902 41.608 3 0.20181839733820936 0.0004751158094785604 0.0009157472718457205 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 34973 10866 GQSELASRLTL True NCI_RA007_Epitope_Rep5 1173.6353510141698 1173.63424993586 48.431 2 0.20181193288816685 0.0004751158094785604 0.0009158835980538975 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 29852 7944 FVTATDVVR True H1975_Epitope_Rep1 1006.5447451046199 1006.54364993586 35.507 2 0.20179019260954392 0.0004751158094785604 0.0009163422194681329 ['ENSG00000136167|ENST00000323076|LCP1'] 4137 11329 AHSVQPLSL True PC9_epitope_Rep4 950.51853035678 950.51742993586 51.356 2 0.20177867543622696 0.0004751158094785604 0.0009165852729852582 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 76765 8559 NQWDGTQHGV True PC9_epitope_Rep5 1140.49483479008 1140.49372993586 37.864 2 0.20175902708402424 0.0004751158094785604 0.00091700007269204 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 134183 22932 VYLPPEAFTF True PC9_epitope_Rep1 1182.5961119711399 1182.5950099358602 93.008 2 0.20175875257784237 0.0004751158094785604 0.0009170058691720938 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 40797 9675 HRYGDSEFTV True PC9_epitope_Rep2 1209.54145062933 1209.5398049037901 42.552 3 0.20175615338432246 0.0004751158094785604 0.0009170607556349805 ['ENSG00000169813|ENST00000682386|HNRNPF'] 130659 10189 VSTEVDARL True PC9_epitope_Rep5 988.5189242795998 988.51782993586 44.179 2 0.201755202952352 0.0004751158094785604 0.0009170808264711707 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 77595 6412 NTDSPLRY True H1975_Epitope_Rep1 964.46140940348 964.46030993586 29.722 2 0.20175488220445406 0.0004751158094785604 0.0009170875999943859 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 121412 10553 VEVTEFEDIK True NCI_RA007_Epitope_Rep3 1207.59723416995 1207.59612993586 48.565 2 0.20175400998436804 0.0004751158094785604 0.0009171060197079019 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 61972 9752 LLDPAQKNLY True H1975_Epitope_Rep2 1173.63937376545 1173.63826993586 42.499 2 0.20174775905102055 0.0004751158094785604 0.0009172380389937197 ['ENST00000593242.7_1_19:9488987-9489811:+|nuORF', 'ENST00000605093.5_1_19:9488987-9490339:+|nuORF', 'nc|ENSG00000188629|Q13360-3|ZNF177', 'ZNF559-ZNF177|p.Y424Mfs*16|1|0.05|ENSG00000270011|chr19:9381599-9381599|C/-|frameshift_variant', 'ENSG00000270011|ENST00000541595|ZNF559-ZNF177', 'ENSG00000188629|ENST00000683217|ZNF177'] 24172 7644 EYQKVGQSF True PC9_epitope_Rep4 1084.5189242795998 1084.5178299358602 36.783 2 0.20174469825208816 0.0004751158094785604 0.0009173026898096889 ['nc|ENSG00000178996|Q96RF0-3|SNX18', 'ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 9315 6429 AVQQPFINK True NCI_RA007_Epitope_Rep5 1043.5763795860698 1043.5752899358602 31.398 2 0.2017411061712693 0.0004751158094785604 0.000917378568298555 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 17676 17475 EHLQVITTL True PC9_epitope_Rep3 1052.5866099166 1052.58550993586 72.396 2 0.20174046374721877 0.0004751158094785604 0.0009173921394157628 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 31340 6214 GDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep1 1156.47065413828 1156.4695499358602 28.207 2 0.2017369015398661 0.0004751158094785604 0.0009174673941960732 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 71832 10561 MELERIVSA True H1975_Epitope_Rep3 1046.5430308524599 1046.54192993586 45.689 2 0.20173365359592457 0.0004751158094785604 0.0009175360152801202 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'CUEDC2|p.L11Pfs*19|1|0.27|ENSG00000107874|chr10:102425157-102425158|-/G|frameshift_variant'] 113497 15183 TLTEEGVIKV True PC9_epitope_Rep3 1087.6124903112698 1087.6113899358602 63.546 2 0.2017163694456691 0.0004751158094785604 0.0009179012735477764 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 102712 6736 SM[Oxidation]DNNRSLDL True NCI_RA007_Epitope_Rep4 1179.51900131303 1179.5179099358602 32.532 2 0.2017158598446446 0.0004751158094785604 0.0009179120449327485 ['CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'KRT3|p.L357V|1|0.56|ENSG00000186442|chr12:52792358-52792358|G/C|missense_variant', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 31391 7256 GDVENIEVVQK True H1975_Epitope_Rep1 1228.6299312805597 1228.62882993586 32.921 2 0.20170909469234422 0.0004751158094785604 0.0009180550512811715 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 142852 14430 YYTDIM[Oxidation]HTL True PC9_epitope_Rep2 1171.5219614351497 1171.5208699358602 60.773 2 0.201701479867665 0.0004751158094785604 0.0009182160453084585 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 82955 7245 PSEESQDYY True H1975_Epitope_Rep2 1116.42474911124 1116.42364993586 32.802 2 0.2016984522866257 0.0004751158094785604 0.0009182800628517991 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 64708 18430 LPVWLENHTA True PC9_epitope_Rep5 1178.60840799034 1178.60730993586 75.911 2 0.20169443901202333 0.0004751158094785604 0.0009183649295712027 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 8683 15912 AVALERTFVGA True PC9_epitope_Rep1 1132.62405805448 1132.62296993586 66.016 2 0.20169379187367525 0.0004751158094785604 0.0009183786150200522 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 115007 7722 TRAGPGTLSV True PC9_epitope_Rep4 957.52434401321 957.52324993586 37.089 2 0.20169351809668942 0.0004751158094785604 0.000918384404818774 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 137513 6705 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 30.703 2 0.20168525204943819 0.0004751158094785604 0.0009185592313095019 ['ENSG00000127184|ENST00000247655|COX7C'] 78434 19612 NYLSIFRKF True PC9_epitope_Rep2 1186.6498788795 1186.6487899358601 80.822 2 0.2016829264336578 0.0004751158094785604 0.0009186084239845198 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 9970 21921 AYPEYLITF True PC9_epitope_Rep4 1115.55391280599 1115.55280993586 92.528 2 0.20167729831051964 0.0004751158094785604 0.0009187274840051009 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP15|p.Q667E|1|0.22|ENSG00000173200|chr3:122636062-122636062|C/G|missense_variant', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 96835 9107 SASFEPFSNK True NCI_RA007_Epitope_Rep2 1112.5138388991597 1112.51274993586 40.03 2 0.20164466385551336 0.0004751158094785604 0.000919418154058379 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 24048 14235 EYNNNFHVL True PC9_epitope_Rep4 1148.5250722892001 1148.5239699358601 62.662 2 0.2016422900711062 0.0004751158094785604 0.0009194684127400406 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 99863 14182 SILPAIFQK True NCI_RA007_Epitope_Rep1 1015.6066170851899 1015.60552993586 59.199 2 0.2016394038751875 0.0004751158094785604 0.0009195295241082352 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 26175 11523 FHDESTQVQL True PC9_epitope_Rep2 1202.5567663402999 1202.5556699358601 49.651 2 0.20163703636495114 0.0004751158094785604 0.0009195796560367705 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 90953 6175 REYQVKLQA True NCI_RA007_Epitope_Rep1 1133.61930702721 1133.61766490379 28.056 3 0.2016234433679204 0.0004751158094785604 0.0009198675402255785 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 49146 4895 KELEKQLVA True NCI_RA007_Epitope_Rep4 1056.6179100448799 1056.6168099358601 25.28 2 0.20161792593647196 0.0004751158094785604 0.0009199844189264429 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant', 'ENST00000530469.1_1_11:43400830-43413141:+|nuORF'] 95999 12077 RYLNEFEEL True NCI_RA007_Epitope_Rep3 1211.5822528121498 1211.5811499358601 54.625 2 0.2016154830805612 0.0004751158094785604 0.0009200361720065549 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 23944 18692 EYLLKVNEI True PC9_epitope_Rep2 1119.61757569171 1119.61646993586 77.265 2 0.20160906573063325 0.0004751158094785604 0.0009201721405693531 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 133675 21956 VYAPPVGGFSF True PC9_epitope_Rep3 1139.56514619603 1139.56404993586 89.753 2 0.2016061128357506 0.0004751158094785604 0.0009202347122420634 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 28881 17410 FTDEEVDELYR True PC9_epitope_Rep5 1414.6252398229399 1414.62414993586 71.969 2 0.201602514443442 0.0004751158094785604 0.0009203109677367542 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 17610 10578 EHINEGETAML True PC9_epitope_Rep6 1242.55505208814 1242.5539499358601 51.498 2 0.20159549101783078 0.0004751158094785604 0.0009204598232379895 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 31673 10573 GEFSITYKP True NCI_RA007_Epitope_Rep2 1040.5178616504397 1040.51676993586 45.725 2 0.2015915016770802 0.0004751158094785604 0.0009205443846575971 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 52609 17269 KLLPGDLTQV True PC9_epitope_Rep4 1082.6335601090202 1082.6324699358602 74.43 2 0.2015893333980667 0.0004751158094785604 0.0009205903485901951 ['ENSG00000147459|ENST00000276440|DOCK5', 'DOCK5|p.F712Lfs*13|1|0.17|ENSG00000147459|chr8:25334140-25334161|TAATCCTGTACTTGAAACCTAC/-|frameshift_variant'] 48342 16871 IYSPQFSRL True PC9_epitope_Rep1 1109.5869442697701 1109.58584993586 69.719 2 0.20158801884680783 0.0004751158094785604 0.0009206182160257074 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171225816-171400468:+|nuORF'] 44784 19786 IMLEALERV True PC9_epitope_Rep2 1072.59506642532 1072.59396993586 81.496 2 0.20157596690866483 0.0004751158094785604 0.000920873746916339 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 127170 10960 VLVDQTTGLSR True PC9_epitope_Rep1 1187.65100107831 1187.64990993586 47.045 2 0.20156467806593031 0.0004751158094785604 0.0009211131628184974 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 90590 9162 REMEENFAVEA True H1975_Epitope_Rep1 1323.57651580871 1323.57540993586 40.148 2 0.20155589925219256 0.0004751158094785604 0.000921299388702777 ['ENSG00000026025|ENST00000544301|VIM'] 78280 19912 NYIGLINRI True PC9_epitope_Rep3 1074.61857875122 1074.61748993586 81.832 2 0.20155301973490067 0.0004751158094785604 0.0009213604804249726 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 108146 13280 SYFPEITHI True NCI_RA007_Epitope_Rep3 1105.54441075145 1105.5433099358602 59.507 2 0.20155190142428708 0.0004751158094785604 0.0009213842075529861 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 3216 5796 AGELTEDEVER True NCI_RA007_Epitope_Rep3 1246.5677249468197 1246.5666299358602 29.777 2 0.20154616835250133 0.0004751158094785604 0.0009215058554112048 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 114121 4581 TPGPGAQSALR True H1975_Epitope_Rep3 1053.55670677065 1053.55560993586 22.743 2 0.2015452174191472 0.0004751158094785604 0.0009215260344598988 ['ENSG00000164587|ENST00000407193|RPS14'] 40321 13456 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 56.616 2 0.20154505627182204 0.0004751158094785604 0.0009215294540912188 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 47970 11699 IYKAPSENW True PC9_epitope_Rep2 1106.53965972418 1106.53856993586 50.333 2 0.20153025054962792 0.0004751158094785604 0.0009218436936405905 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 14740 9635 DVNAAIATIK True NCI_RA007_Epitope_Rep2 1014.57095985246 1014.5703749679301 42.093 1 0.20152417099345254 0.0004751158094785604 0.0009219727584553348 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 43727 11543 IHEPEPHIL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 49.397 2 0.20151221767544517 0.0004751158094785604 0.0009222265720604133 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 139104 9181 YLDKGILKY True H1975_Epitope_Rep2 1111.62774645259 1111.62664993586 40.269 2 0.2015115733683941 0.0004751158094785604 0.0009222402550968978 ['OSBPL3|p.E121Sfs*6|1|0.3|ENSG00000070882|chr7:24870752-24870752|C/-|frameshift_variant', 'nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 28902 7974 FTDGITRTY True H1975_Epitope_Rep2 1072.5189242796 1072.5178299358602 35.619 2 0.20151147910730535 0.0004751158094785604 0.0009222422569202737 ['ENST00000294309.7_2_11:68821527-68822650:+|nuORF'] 5139 18621 ALLPHLYTL True PC9_epitope_Rep6 1039.60661708519 1039.6055299358602 84.269 2 0.20150946522360025 0.0004751158094785604 0.0009222850268232716 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 26838 11403 FLDASGAKLDY True H1975_Epitope_Rep1 1198.5870038394198 1198.5859099358602 48.841 2 0.2014999739511999 0.0004751158094785604 0.0009224866247286307 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 48051 12930 IYLSKPTHW True PC9_epitope_Rep5 1143.60767971435 1143.60604490379 54.747 3 0.20149773712942237 0.0004751158094785604 0.0009225341420309286 ['ENSG00000047315|ENST00000314595|POLR2B'] 137226 12462 YAYRDAVFL True H1975_Epitope_Rep3 1116.56039516876 1116.55928993586 53.128 2 0.2014954969097662 0.0004751158094785604 0.0009225817339755282 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000525495.6_2_17:45219385-45266538:-|nuORF', 'ENST00000528147.1_1_17:45258889-45266538:-|nuORF'] 134892 15855 VYVQNVVKL True PC9_epitope_Rep2 1060.6280808057597 1060.6269899358601 66.245 2 0.20149138474900832 0.0004751158094785604 0.0009226691004456171 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 142884 15914 YYTPITPHL True PC9_epitope_Rep6 1103.56514619603 1103.56404993586 73.498 2 0.2014776591667185 0.0004751158094785604 0.0009229607725816319 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 24874 17680 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.4960299358602 73.02 2 0.2014633571865027 0.0004751158094785604 0.000923264791702004 ['ENSG00000204592|ENST00000376630|HLA-E'] 91053 18966 RFLDDLGLKF True PC9_epitope_Rep6 1222.6710082468996 1222.66936490379 85.598 3 0.20145744507724983 0.0004751158094785604 0.0009233904955435601 ['ENSG00000046604|ENST00000261590|DSG2'] 140246 18668 YQYPVIIHL True PC9_epitope_Rep6 1144.6280808057597 1144.6269899358601 84.451 2 0.20145536564942929 0.0004751158094785604 0.0009234347126202858 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 24110 16582 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 69.019 2 0.2014526477696363 0.0004751158094785604 0.0009234925089793921 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 142233 18671 YWMHVQNTF True PC9_epitope_Rep2 1224.53861417836 1224.53750993586 77.185 2 0.20143731971726878 0.0004751158094785604 0.0009238185315863589 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 14443 12799 DTEFPNFKY True H1975_Epitope_Rep3 1159.51858992643 1159.51748993586 54.448 2 0.201436579927655 0.0004751158094785604 0.000923834269586672 ['ENSG00000132383|ENST00000254719|RPA1'] 60430 4841 LGVIEDHSNR True NCI_RA007_Epitope_Rep2 1138.5730851107799 1138.57144490379 23.453 3 0.20143622059777802 0.0004751158094785604 0.0009238419139295892 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 108394 9816 SYLIQHQRF True PC9_epitope_Rep2 1190.6196413803802 1190.61799490379 43.093 3 0.2014261174059121 0.0004751158094785604 0.0009240568740537209 ['ENSG00000197951|ENST00000599599|ZNF71', 'nc|ENSG00000197951|Q9NQZ8|ZNF71'] 26271 20001 FHFQDQQILTL True PC9_epitope_Rep4 1388.7088503075997 1388.7077499358602 85.066 2 0.20142544072336588 0.0004751158094785604 0.0009240712732529143 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 54032 14428 KVIDEIYRV True PC9_epitope_Rep1 1133.64445914589 1133.6433699358602 60.321 2 0.20142402122678044 0.0004751158094785604 0.0009241014796014733 ['ENSG00000143756|ENST00000366862|FBXO28'] 46626 7363 ITDHLDTQY True H1975_Epitope_Rep1 1104.5087535187201 1104.5076499358602 33.328 2 0.20142224121173483 0.0004751158094785604 0.0009241393590455334 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 35578 4183 GTADVHFER True NCI_RA007_Epitope_Rep3 1030.48320747722 1030.48210993586 23.082 2 0.20142140297189243 0.0004751158094785604 0.00092415719766961 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 68202 5010 LTDTPKATSY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 24.354 2 0.20142057955061216 0.0004751158094785604 0.0009241747212753703 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 24249 14911 EYSRFVNQI True PC9_epitope_Rep1 1154.5720224816198 1154.57092993586 62.177 2 0.20141021486745123 0.0004751158094785604 0.0009243953253494009 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF'] 86027 7878 QHQETINTL True PC9_epitope_Rep5 1082.5356369729 1082.53452993586 35.244 2 0.20140807699481156 0.0004751158094785604 0.000924440834845597 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 116335 6317 TTETETIAKY True H1975_Epitope_Rep2 1155.5659340416698 1155.5648299358602 29.234 2 0.20140217466935467 0.0004751158094785604 0.0009245664909739227 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 103405 5908 SPPPPPPPP True NCI_RA007_Epitope_Rep5 881.4647038787699 881.46360993586 29.411 2 0.20139343928693687 0.0004751158094785604 0.00092475249221994 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 82941 2756 PSDPRYHEVHY True H1975_Epitope_Rep2 1398.63166261606 1398.63001490379 14.629 3 0.20138888770805458 0.0004751158094785604 0.0009248494232080675 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 103149 11587 SPIENIQRV True PC9_epitope_Rep3 1054.57710786206 1054.5760099358602 49.584 2 0.20138478178820093 0.0004751158094785604 0.0009249368721284718 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 55425 19608 LAFEEEFGRV True PC9_epitope_Rep2 1195.5873381925899 1195.58624993586 80.807 2 0.20138332253017988 0.0004751158094785604 0.0009249679537725865 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF', 'EIF3I|p.K282N|1|0.28|ENSG00000084623|chr1:32230969-32230969|G/C|missense_variant'] 91682 18661 RIYGKFLGL True PC9_epitope_Rep5 1065.6335005393698 1065.63240993586 76.802 2 0.20138033888296725 0.0004751158094785604 0.0009250315075907006 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'PPP2R5E|p.R214I|1|0.25|ENSG00000154001|chr14:63396625-63396625|C/A|missense_variant', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 39059 11554 HHSNIPMSL True PC9_epitope_Rep1 1034.49674936638 1034.49564993586 49.322 2 0.2013607116234123 0.0004751158094785604 0.0009254496914261397 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61417336-61434009:-|nuORF'] 131038 5081 VTDRSDARLQY True H1975_Epitope_Rep3 1322.6578773638998 1322.6562449037901 24.661 3 0.2013574823521776 0.0004751158094785604 0.0009255185133365987 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 57100 7997 LDSSAVLDTGK True NCI_RA007_Epitope_Rep1 1104.56626839484 1104.56516993586 35.1 2 0.20135606800659986 0.0004751158094785604 0.0009255486573466027 ['ENSG00000138095|ENST00000260665|LRPPRC'] 109704 12669 TEDGDSFLHLA True H1975_Epitope_Rep2 1203.54078192299 1203.53968993586 53.831 2 0.20134799049594576 0.0004751158094785604 0.0009257208325605095 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 77524 7969 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 35.601 2 0.20134502462288306 0.0004751158094785604 0.0009257840593361183 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 95864 18406 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.6263299358602 75.819 2 0.20133673723303344 0.0004751158094785604 0.0009259607536935949 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 75996 21442 NLVRELLAV True PC9_epitope_Rep1 1025.6233297784897 1025.62222993586 87.315 2 0.20132966212103204 0.0004751158094785604 0.0009261116279962399 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'PSAT1|p.D68Y|1|0.4|ENSG00000135069|chr9:78304745-78304745|G/T|missense_variant'] 68022 9068 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60664993586 39.787 2 0.20132686910013783 0.0004751158094785604 0.0009261711949828594 ['ENSG00000167658|ENST00000309311|EEF2'] 9824 18601 AYLEAIHNF True PC9_epitope_Rep3 1076.52909504048 1076.5279899358602 76.771 2 0.20131628562543466 0.0004751158094785604 0.0009263969444883674 ['ENSG00000042753|ENST00000263270|AP2S1'] 24118 14653 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep5 1300.57578791316 1300.57468993586 61.365 2 0.20130767489050372 0.0004751158094785604 0.0009265806554255955 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 87714 7109 QRAITGASL True PC9_epitope_Rep2 915.5137793295099 915.51268993586 32.741 2 0.20130620331336865 0.0004751158094785604 0.0009266120553344229 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 33011 11036 GIGTDEFTLNR True NCI_RA007_Epitope_Rep1 1221.5989655054498 1221.5978699358602 46.924 2 0.20130368360260445 0.0004751158094785604 0.0009266658223664598 ['ENSG00000138772|ENST00000264908|ANXA3', 'ENST00000505805.1_1_4:79518453-79531266:+|nuORF'] 65868 14795 LSDLWDQEQY True H1975_Epitope_Rep2 1295.56699667083 1295.56588993586 62.067 2 0.20130283290935433 0.0004751158094785604 0.0009266839756529851 ['ENSG00000095564|ENST00000265990|BTAF1', 'nc|ENSG00000095564|O14981-2|BTAF1'] 9034 10551 AVHDSFVAV True PC9_epitope_Rep6 943.4763311916299 943.4752299358599 51.382 2 0.2012972417124007 0.0004751158094785604 0.0009268032973368655 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 111277 11874 THLLNQDTL True PC9_epitope_Rep2 1053.54547338061 1053.54436993586 50.998 2 0.20128928119975234 0.0004751158094785604 0.0009269732091534995 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 138832 15351 YIYKDTIQV True PC9_epitope_Rep5 1141.60192562757 1141.60082993586 64.057 2 0.20128647059965263 0.0004751158094785604 0.000927033206994361 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 137542 16524 YEELNVWQV True H1975_Epitope_Rep1 1178.5607890915799 1178.5596899358602 68.932 2 0.20127044258018348 0.0004751158094785604 0.0009273754313434524 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 134893 16591 VYVQNVVKL True PC9_epitope_Rep3 1060.6280808057597 1060.6269899358601 68.954 2 0.2012661304947619 0.0004751158094785604 0.0009274675230256877 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 102822 5749 SNPALNDNLEK True H1975_Epitope_Rep3 1213.5938801250097 1213.59278993586 27.139 2 0.20126435173946933 0.0004751158094785604 0.0009275055139449484 ['ENSG00000213719|ENST00000375784|CLIC1'] 18358 9342 EITALAPSTM[Oxidation]K True PC9_epitope_Rep1 1176.6060254122801 1176.6049299358601 40.791 2 0.2012606513835274 0.0004751158094785604 0.0009275845516964717 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 92529 13010 RMDNIYFEY True H1975_Epitope_Rep2 1249.54375912845 1249.5426699358602 55.161 2 0.2012600756342976 0.0004751158094785604 0.0009275968500192203 ['ENSG00000113318|ENST00000265081|MSH3'] 2084 12522 AELENLVNQAA True H1975_Epitope_Rep1 1170.58806646858 1170.58696993586 53.209 2 0.2012588951392631 0.0004751158094785604 0.0009276220665590413 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 141264 5217 YTDHQNSSSYY True H1975_Epitope_Rep3 1363.5316737912701 1363.53117496793 25.153 1 0.20125785975991192 0.0004751158094785604 0.0009276441838504827 ['ENSG00000125398|ENST00000245479|SOX9'] 24867 17929 FAYDGKDYL True PC9_epitope_Rep3 1090.4971262058598 1090.4960299358602 74.168 2 0.20125766985976556 0.0004751158094785604 0.0009276482404663568 ['ENSG00000204592|ENST00000376630|HLA-E'] 89594 17091 QYNTYPIKL True PC9_epitope_Rep1 1138.60225998074 1138.60116993586 70.567 2 0.20125704944592693 0.0004751158094785604 0.0009276614937693375 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 106100 8526 STDGEVETQVY True H1975_Epitope_Rep1 1226.53027680894 1226.5291699358602 37.723 2 0.20125124058663155 0.0004751158094785604 0.0009277855920461018 ['ENSG00000047410|ENST00000367478|TPR'] 95409 20481 RWFDKSFTF True PC9_epitope_Rep3 1232.59784330664 1232.5961849037901 84.039 3 0.20125008348883427 0.0004751158094785604 0.0009278103138351167 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 17851 22061 EHVFWVVSL True PC9_epitope_Rep3 1114.5811306133398 1114.58002993586 90.155 2 0.20124728892662977 0.0004751158094785604 0.0009278700233342342 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 42775 9869 IENGHIFTV True H1975_Epitope_Rep1 1028.52909504048 1028.5279899358602 42.894 2 0.20124286687926787 0.0004751158094785604 0.0009279645140696458 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 7478 9063 ASDAAPLQY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 39.814 1 0.20121613081698142 0.0004751158094785604 0.0009285360184354938 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 116706 13930 TVDEHVWFY True H1975_Epitope_Rep2 1194.53457434374 1194.53346993586 58.73 2 0.20119651293793467 0.0004751158094785604 0.0009289555905618678 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 78150 17862 NYAQVFNKL True PC9_epitope_Rep1 1095.57129420563 1095.57018993586 73.499 2 0.20119033395888192 0.0004751158094785604 0.0009290877811913332 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 28293 17733 FRQEYLDTL True PC9_epitope_Rep5 1183.5873381925896 1183.58624993586 73.229 2 0.20118713572354627 0.0004751158094785604 0.0009291562103803041 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 40728 6517 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.61258490379 29.871 3 0.20117770403368415 0.0004751158094785604 0.0009293580395012654 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 74772 19417 NHDFTPLEI True PC9_epitope_Rep1 1084.5189242796 1084.5178299358602 79.498 2 0.2011702997060268 0.0004751158094785604 0.0009295165158223277 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 125989 13733 VLDPYLLKY True H1975_Epitope_Rep2 1122.63249747986 1122.6314099358601 57.969 2 0.20116588350208078 0.0004751158094785604 0.0009296110496307903 ['ENSG00000239789|ENST00000285298|MRPS17'] 1916 5240 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5971499358602 25.224 2 0.20115898965988455 0.0004751158094785604 0.0009297586393453603 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 72253 16654 MHNEEPFAL True PC9_epitope_Rep1 1086.4804305958999 1086.47932993586 68.889 2 0.2011310927835901 0.0004751158094785604 0.0009303561213357983 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 118165 18927 TYIQKIFRM True PC9_epitope_Rep1 1198.65325000778 1198.65160490379 77.587 3 0.20112861208945146 0.0004751158094785604 0.0009304092702998107 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 26402 14976 FHYEADGANVL True PC9_epitope_Rep4 1234.5618517207397 1234.56074993586 65.543 2 0.20112788123424571 0.0004751158094785604 0.0009304249294804554 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 8091 10338 ATDWGDTQAY True H1975_Epitope_Rep1 1126.4567179458597 1126.45562993586 44.712 2 0.20112157875001788 0.0004751158094785604 0.000930559976415037 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 8362 17743 ATLKELTSL True PC9_epitope_Rep3 974.56481184286 974.56370993586 73.445 2 0.2011108598892698 0.0004751158094785604 0.0009307897007258964 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 73369 15211 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.5468749679299 63.665 1 0.20110916978390783 0.0004751158094785604 0.0009308259278901222 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 25644 4631 FEQAGEPRQP True H1975_Epitope_Rep2 1157.5465360097699 1157.54542993586 22.913 2 0.20110341922429245 0.0004751158094785604 0.0009309492008962326 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 115750 15529 TSDDPWLTAY True H1975_Epitope_Rep2 1167.5084191655499 1167.5078749679299 64.887 1 0.2011025808953413 0.0004751158094785604 0.0009309671732676484 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 43710 11560 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 49.344 2 0.20110126034473913 0.0004751158094785604 0.0009309954843710097 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 8757 7161 AVDDGVNTFK True NCI_RA007_Epitope_Rep1 1064.5138388991602 1064.51274993586 31.844 2 0.2010893250934616 0.0004751158094785604 0.0009312514017597949 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000413611.2_1_1:146675128-146675437:-|nuORF'] 17634 15459 EHIQNIMTL True PC9_epitope_Rep6 1097.55392988933 1097.55282993586 71.621 2 0.20108680005331045 0.0004751158094785604 0.0009313055530784421 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 72499 9037 MLDSHEELY True H1975_Epitope_Rep1 1135.48557554599 1135.48446993586 39.668 2 0.20108650200949604 0.0004751158094785604 0.0009313119450527334 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 40041 10984 HPTEDLVVSA True PC9_epitope_Rep3 1066.5294889632999 1066.52838993586 47.235 2 0.20107901200291545 0.0004751158094785604 0.0009314725933639999 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 7947 6896 ATATANQIILK True NCI_RA007_Epitope_Rep3 1142.66592286646 1142.66482993586 34.23 2 0.20106846009086193 0.0004751158094785604 0.0009316989616652993 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 140234 13495 YQYPRPLLI True H1975_Epitope_Rep2 1161.6546299067697 1161.6535299358602 57.041 2 0.20106284568624158 0.0004751158094785604 0.0009318194289809562 ['ENSG00000160991|ENST00000495936|ORAI2'] 47904 11924 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6584049037901 53.65 3 0.20105555680419449 0.0004751158094785604 0.0009319758485768165 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 97927 6128 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 28.55 2 0.2010494161667321 0.0004751158094785604 0.0009321076472523756 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 76623 13403 NQQEFVRAL True PC9_epitope_Rep5 1103.5723568347898 1103.5712499358601 56.571 2 0.2010398394969804 0.0004751158094785604 0.0009323132320159726 ['ENSG00000105372|ENST00000598742|RPS19'] 128933 11116 VQIEEVRQV True PC9_epitope_Rep5 1098.6033226098998 1098.6022299358601 47.747 2 0.20103449358149458 0.0004751158094785604 0.00093242801389789 ['ENSG00000143621|ENST00000361891|ILF2'] 9654 6806 AYEAELGDAR True NCI_RA007_Epitope_Rep1 1093.50400249145 1093.50290993586 30.482 2 0.20101516188051546 0.0004751158094785604 0.0009328432021790926 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 142557 18967 YYLNDLERI True PC9_epitope_Rep4 1197.6029882567298 1197.60188993586 81.046 2 0.2010124179827738 0.0004751158094785604 0.0009329021480854214 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 137546 4917 YEELQQTAGR True H1975_Epitope_Rep3 1193.5676653771698 1193.5665699358601 24.042 2 0.20100922507651195 0.0004751158094785604 0.000932970744540065 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 21326 17523 ERFEIPIKV True PC9_epitope_Rep2 1129.6495445263297 1129.64788490379 72.665 3 0.20099899797389867 0.0004751158094785604 0.00093319049784714 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 55408 8225 LAEVEAALEK True H1975_Epitope_Rep1 1071.5811901829898 1071.58008993586 36.581 2 0.2009915624169673 0.0004751158094785604 0.0009333503008331469 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 15024 16933 DYLEVAKHF True PC9_epitope_Rep1 1120.55530978832 1120.5542099358602 69.956 2 0.20098957483059882 0.0004751158094785604 0.000933393022152322 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.L126Pfs*6|1|0.29|ENSG00000128272|chr22:39521916-39521917|-/C|frameshift_variant'] 54057 13825 KVIEGLDTGL True PC9_epitope_Rep6 1043.5862755634298 1043.5851699358602 64.984 2 0.20098546370048692 0.0004751158094785604 0.0009334813932914486 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 77531 8038 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.58277496793 35.892 1 0.20098037934724605 0.0004751158094785604 0.0009335906960353308 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 106541 15596 STLTEEGVIKV True PC9_epitope_Rep5 1174.64451871554 1174.64342993586 64.999 2 0.20097556154658872 0.0004751158094785604 0.0009336942803115856 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 41458 15978 HYKPTPLYF True PC9_epitope_Rep3 1164.59678067748 1164.59568993586 66.605 2 0.20097293925593285 0.0004751158094785604 0.0009337506652551459 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 38213 8282 HEAFESDLAA True H1975_Epitope_Rep2 1088.47745339044 1088.47634993586 36.807 2 0.20096686487460813 0.0004751158094785604 0.0009338812907624016 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 8428 9333 [Acetylation]-ATNFLAHEK True NCI_RA007_Epitope_Rep2 1071.53490901321 1071.53380993586 40.911 2 0.20096633355019466 0.0004751158094785604 0.0009338927174101158 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 24323 12911 EYVEKFYRI True PC9_epitope_Rep6 1245.6393737654498 1245.63772490379 61.196 3 0.2009662618908891 0.0004751158094785604 0.0009338942585238335 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 136872 7753 YADYSGQQSTY True H1975_Epitope_Rep2 1281.51496109797 1281.5138699358602 34.775 2 0.20096031132677802 0.0004751158094785604 0.0009340222409775371 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 107004 9571 SVFEDPVISK True NCI_RA007_Epitope_Rep3 1119.58119018299 1119.58008993586 44.733 2 0.2009551187442556 0.0004751158094785604 0.0009341339354254185 ['ENSG00000125445|ENST00000245539|MRPS7'] 18670 8819 ELAEDDSILK True H1975_Epitope_Rep1 1131.5659340416698 1131.5648299358602 38.844 2 0.20095211850975453 0.0004751158094785604 0.0009341984777298751 ['ENST00000515116.1_1_4:666291-667257:-|nuORF', 'ENSG00000169020|ENST00000304312|ATP5ME', 'ENST00000505852.1_1_4:666291-668103:-|nuORF'] 54690 21156 KYLTEGLLQF True PC9_epitope_Rep5 1210.65977485686 1210.6586699358602 86.429 2 0.2009427435492046 0.0004751158094785604 0.0009344001846416801 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 74832 9762 NHEEEISTL True PC9_epitope_Rep3 1070.48801807414 1070.4869299358602 42.502 2 0.20094014995007115 0.0004751158094785604 0.0009344559949224665 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 68098 14145 LTDPAIVKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 59.231 2 0.2009302281827279 0.0004751158094785604 0.0009346695270178708 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 39116 13016 HHYEGAVVIL True PC9_epitope_Rep2 1136.5978433066398 1136.5961849037901 55.35 3 0.20092964816935988 0.0004751158094785604 0.0009346820113350372 ['ENSG00000163655|ENST00000496455|GMPS'] 40330 13616 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 57.437 2 0.20092435377848528 0.0004751158094785604 0.0009347959765339967 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 7865 6404 ATADLALGR True NCI_RA007_Epitope_Rep5 886.4872302284999 886.48612993586 31.305 2 0.20091731709373595 0.0004751158094785604 0.0009349474673096488 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 62041 15025 LLDSDEPLVY True H1975_Epitope_Rep3 1162.57577044938 1162.5746699358601 63.184 2 0.2008982203285236 0.0004751158094785604 0.0009353587202068165 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 138544 20038 YHYIFVTGV True PC9_epitope_Rep5 1097.5545815123298 1097.5534899358602 82.128 2 0.20089768109107176 0.0004751158094785604 0.0009353703354333483 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3', 'ABCC3|p.E507Sfs*5|1|0.28|ENSG00000108846|chr17:50667639-50667639|G/-|frameshift_variant', 'ENST00000515070.1_1_17:48741105-48741487:+|nuORF', 'ENST00000571855.1_1_17:48740997-48741507:+|nuORF'] 71228 20523 LYPEVFEKF True PC9_epitope_Rep5 1170.5961119711399 1170.5950099358602 83.984 2 0.2008819894582882 0.0004751158094785604 0.0009357083980713462 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 41284 16898 HVQPYIPSI True PC9_epitope_Rep2 1052.5654805492 1052.5643899358602 70.243 2 0.20087033286683734 0.0004751158094785604 0.0009359596085613778 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 4241 19026 AIDPHLLLSV True PC9_epitope_Rep6 1076.6229954253201 1076.62188993586 85.826 2 0.20086567879806533 0.0004751158094785604 0.0009360599270064323 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 48947 6406 KEEFQQYAA True H1975_Epitope_Rep2 1112.5138388991602 1112.51274993586 29.564 2 0.2008639377006122 0.0004751158094785604 0.0009360974591309549 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 14442 12910 DTEFPNFKY True H1975_Epitope_Rep2 1159.51858992643 1159.51748993586 54.771 2 0.20086260451175253 0.0004751158094785604 0.0009361261991573318 ['ENSG00000132383|ENST00000254719|RPA1'] 103148 11099 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 48.016 2 0.20085342054621358 0.0004751158094785604 0.0009363242052155955 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 84326 11892 PYTKVEESF True PC9_epitope_Rep1 1098.5233409536997 1098.5222499358601 50.609 2 0.20084277763939903 0.0004751158094785604 0.0009365537185533557 ['ENSG00000182858|ENST00000330817|ALG12'] 103368 4761 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 23.44 2 0.2008418830384173 0.0004751158094785604 0.000936573013114345 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 29169 12305 FTQGHIVEV True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 52.323 2 0.20084009460970276 0.0004751158094785604 0.0009366115867541824 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 107530 17012 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 70.688 2 0.20083951097110259 0.0004751158094785604 0.000936624175280451 ['ENSG00000073756|ENST00000367468|PTGS2'] 84241 20079 PYMDSPQSIGF True PC9_epitope_Rep4 1240.5434247752798 1240.5423299358602 85.366 2 0.20083035747472477 0.0004751158094785604 0.0009368216296422705 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 142774 17047 YYRGNYMTF True PC9_epitope_Rep5 1213.52262976105 1213.5215299358601 70.59 2 0.2008169578382813 0.0004751158094785604 0.0009371107547732963 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 78676 12072 NYYEQWGK True PC9_epitope_Rep3 1086.47705946762 1086.4759699358601 51.477 2 0.20079379825841587 0.0004751158094785604 0.0009376106820801379 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 24207 14963 EYRPEFSNF True PC9_epitope_Rep6 1187.5247379360299 1187.52364993586 69.566 2 0.200790249697545 0.0004751158094785604 0.0009376873056503556 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 120047 9278 VDSLVPIGR True H1975_Epitope_Rep1 954.5498304850599 954.54872993586 40.6 2 0.20078909659328065 0.0004751158094785604 0.000937712205818645 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 10149 6546 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep4 1119.5171508382302 1119.51604993586 31.791 2 0.2007879785471462 0.0004751158094785604 0.0009377363495738318 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 25726 6158 FESPEVAER True H1975_Epitope_Rep3 1062.4981888350198 1062.49708993586 28.699 2 0.2007769948800654 0.0004751158094785604 0.0009379735705828875 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM', 'ENST00000602219.1_1_19:8553540-8553735:+|nuORF', 'ENST00000596295.1_1_19:8552895-8553735:+|nuORF'] 76759 7670 NQWDGTQHGV True PC9_epitope_Rep2 1140.49483479008 1140.49372993586 34.871 2 0.2007741337026764 0.0004751158094785604 0.0009380353750699032 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 114479 6575 TPYKQEINA True PC9_epitope_Rep1 1062.53457434374 1062.53346993586 30.094 2 0.200766361295264 0.0004751158094785604 0.000938203287988039 ['ENSG00000138356|ENST00000374700|AOX1'] 7918 6781 ATANQIILK True NCI_RA007_Epitope_Rep4 970.58113061334 970.58002993586 32.704 2 0.20076535211784155 0.0004751158094785604 0.0009382250921861168 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 90468 7321 RELADDITA True H1975_Epitope_Rep2 1002.49818883502 1002.49708993586 33.1 2 0.20075899986782844 0.0004751158094785604 0.0009383623500055574 ['ENSG00000018699|ENST00000317907|TTC27'] 132587 8985 VVESAYEVIK True NCI_RA007_Epitope_Rep2 1135.6124903112698 1135.6113899358602 39.558 2 0.20074972909522015 0.0004751158094785604 0.0009385627066707166 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 14908 16975 DYAYLREHF True PC9_epitope_Rep1 1212.5563724174797 1212.55526993586 70.118 2 0.2007457043957369 0.0004751158094785604 0.0009386497004107501 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 105699 11248 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 48.309 2 0.20074135017551356 0.0004751158094785604 0.0009387438258372605 ['ENSG00000115758|ENST00000234111|ODC1'] 76671 16425 NQSEKIFSL True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 68.002 2 0.20073648004785805 0.0004751158094785604 0.0009388491148791557 ['ENSG00000130818|ENST00000253115|ZNF426'] 8426 8687 [Acetylation]-ATNFLAHEK True H1975_Epitope_Rep1 1071.53490901321 1071.53380993586 38.345 2 0.20072746812013484 0.0004751158094785604 0.000939043978222964 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 110390 9677 TEVLKTHGLLV True NCI_RA007_Epitope_Rep4 1208.71287305888 1208.71176993586 44.071 2 0.2007226268506298 0.0004751158094785604 0.0009391486768982213 ['ENSG00000142541|ENST00000391857|RPL13A'] 84405 11828 QADIARMLY True H1975_Epitope_Rep2 1079.54336520563 1079.54226993586 50.574 2 0.20072208294125343 0.0004751158094785604 0.0009391604403690564 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 140065 14951 YQITQINHGL True PC9_epitope_Rep5 1185.61422164677 1185.6131299358601 62.511 2 0.2007182684519239 0.0004751158094785604 0.0009392429428858701 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 48041 23153 IYLPYLQNW True PC9_epitope_Rep2 1208.6229954253201 1208.62188993586 94.543 2 0.200690681237428 0.0004751158094785604 0.0009398398354080453 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 139194 15016 YLEQLILKY True H1975_Epitope_Rep2 1181.6696112645698 1181.6685099358601 62.91 2 0.20068582497123263 0.0004751158094785604 0.0009399449476925229 ['ENSG00000169251|ENST00000351193|NMD3', 'ENST00000478160.1_1_3:160945095-160953023:+|nuORF', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 7747 9456 ASQELWLNH True NCI_RA007_Epitope_Rep4 1096.53015766964 1096.5290699358602 43.23 2 0.2006762784818857 0.0004751158094785604 0.0009401516126849226 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 4405 12000 AIPQLQGYLR True NCI_RA007_Epitope_Rep5 1157.6556925359298 1157.65458993586 52.819 2 0.2006712248606059 0.0004751158094785604 0.0009402610332967785 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 129130 16803 VQQTVQDLFGR True PC9_epitope_Rep1 1289.67279915205 1289.67170993586 69.457 2 0.20066306722550273 0.0004751158094785604 0.0009404376887218824 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 105288 14164 SRMDGEGQLTL True PC9_epitope_Rep1 1205.5710365054497 1205.56992993586 59.304 2 0.20066266557246 0.0004751158094785604 0.0009404463874687197 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 18772 7215 ELDAVQREY True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 32.687 2 0.20065982231617197 0.0004751158094785604 0.0009405079672174502 ['SMCHD1-NDC80|5|fusion', 'SMCHD1-NDC80|4|fusion', 'SMCHD1-NDC80|3|fusion', 'SMCHD1-NDC80|2|fusion', 'ENSG00000080986|ENST00000261597|NDC80', 'SMCHD1-NDC80|1|fusion'] 96279 11122 RYQTQPVTL True PC9_epitope_Rep1 1104.5927579261997 1104.5916699358602 47.666 2 0.20065559883060397 0.0004751158094785604 0.0009405994476817358 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 97793 7757 SELEAALQR True H1975_Epitope_Rep3 1015.5298233164699 1015.52872993586 34.822 2 0.20065135113080568 0.0004751158094785604 0.000940691461625741 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 92355 14297 RLPDIPLRQV True PC9_epitope_Rep4 1205.72444080209 1205.72278490379 62.894 3 0.20064635939722544 0.0004751158094785604 0.0009407996044148877 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 24008 11314 EYMKHTRLF True PC9_epitope_Rep5 1223.6121134717898 1223.61046490379 48.511 3 0.20064282181149387 0.0004751158094785604 0.0009408762515485307 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 36628 15491 GVIDLIFEK True NCI_RA007_Epitope_Rep3 1032.58554728744 1032.5844499358602 68.494 2 0.20063704198771976 0.0004751158094785604 0.000941001493628294 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 24437 7256 FADLSEAANR True NCI_RA007_Epitope_Rep4 1092.5199869087598 1092.5188899358602 34.547 2 0.20063438145793555 0.0004751158094785604 0.0009410591498433534 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 85825 13298 QHEEFVTSL True PC9_epitope_Rep4 1088.51383889916 1088.51274993586 59.048 2 0.20063419515344955 0.0004751158094785604 0.0009410631873717864 ['ENSG00000085872|ENST00000546361|CHERP'] 55014 10376 KYQKGFSLW True NCI_RA007_Epitope_Rep5 1155.6076797143498 1155.60658993586 46.539 2 0.20063024708805902 0.0004751158094785604 0.0009411487526079548 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 87586 12932 QQLPEIQRV True PC9_epitope_Rep5 1109.61930702721 1109.61820993586 54.755 2 0.20062575630227797 0.0004751158094785604 0.0009412460895454482 ['ENSG00000163214|ENST00000457308|DHX57'] 14420 4218 DTDSEEEIR True PC9_epitope_Rep4 1092.45711186868 1092.45600993586 22.6 2 0.20062339905651494 0.0004751158094785604 0.0009412971864447931 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 92512 18340 RLYDGLFKVI True PC9_epitope_Rep6 1222.70739375562 1222.70628993586 83.187 2 0.20061784888460188 0.0004751158094785604 0.0009414175058777269 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 21242 14490 ERDPSPWAV True PC9_epitope_Rep5 1055.50360856863 1055.5025099358602 60.736 2 0.20061730502197347 0.0004751158094785604 0.0009414292968365035 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 84175 14064 PYITEHTGF True PC9_epitope_Rep5 1063.49746055903 1063.49636993586 59.111 2 0.20061413876102402 0.0004751158094785604 0.00094149794441394 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'ENST00000520983.5_1_8:28651295-28747426:-|nuORF', 'nc|ENSG00000104299|Q9NV88-2|INTS9'] 54191 2623 KVVDSLYNK True NCI_RA007_Epitope_Rep5 1064.5866099165999 1064.58550993586 14.776 2 0.2005992334225738 0.0004751158094785604 0.0009418211739122195 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 8806 10177 AVDSLVPIGR True H1975_Epitope_Rep3 1025.58694426977 1025.58584993586 44.19 2 0.20059606143315334 0.0004751158094785604 0.0009418899744030127 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 55034 7676 KYSLIKGNF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 37.312 2 0.20059465043298821 0.0004751158094785604 0.0009419205806342713 ['ENSG00000143546|ENST00000368733|S100A8'] 48007 14097 IYLEKLKTI True PC9_epitope_Rep2 1119.69034670915 1119.68924993586 59.499 2 0.20058762179612058 0.0004751158094785604 0.0009420730547854217 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 43858 10675 IHSSETLTL True PC9_epitope_Rep4 999.52367530687 999.52256993586 48.808 2 0.20058077130955942 0.0004751158094785604 0.0009422216880934681 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 116752 17258 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54370993586 71.844 2 0.20058054958872978 0.0004751158094785604 0.0009422264991082162 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 142880 16876 YYTPITPHL True PC9_epitope_Rep4 1103.56514619603 1103.56404993586 72.894 2 0.20057173744963344 0.0004751158094785604 0.0009424177294691548 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 28185 19431 FRDYFPIQL True PC9_epitope_Rep6 1197.6182443980497 1197.6171499358602 87.402 2 0.20055159490160313 0.0004751158094785604 0.0009428549848138256 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 11797 7320 DHFASVHSV True PC9_epitope_Rep1 997.46174375665 997.46064993586 32.969 2 0.20054359231792315 0.0004751158094785604 0.0009430287617332149 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 140769 12158 YSDGLGGNSLY True H1975_Epitope_Rep2 1144.5036681382799 1144.50256993586 51.85 2 0.20054340785200808 0.0004751158094785604 0.0009430327678080697 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 9985 12117 AYPHNLMTF True NCI_RA007_Epitope_Rep5 1092.50625142092 1092.5051499358601 53.262 2 0.20053620184771878 0.0004751158094785604 0.000943189275076312 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 49578 9926 KFSPNTSQF True PC9_epitope_Rep2 1054.5083595959002 1054.5072699358602 43.512 2 0.2005300222734144 0.0004751158094785604 0.0009433235100509865 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 40747 6726 HRTELETKL True PC9_epitope_Rep5 1125.61422164677 1125.61258490379 30.842 3 0.2005242285666604 0.0004751158094785604 0.0009434493804721006 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 118680 20730 TYTDRVFFL True PC9_epitope_Rep2 1160.5866099165999 1160.58550993586 85.175 2 0.20052180877886688 0.0004751158094785604 0.0009435019562430113 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 21877 13253 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45454993586 56.107 2 0.20051293196937103 0.0004751158094785604 0.0009436948516661889 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 78508 14870 NYPETLGRLLI True NCI_RA007_Epitope_Rep3 1287.7186867153098 1287.7175899358601 65.924 2 0.2005055483049087 0.0004751158094785604 0.0009438553307832834 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 37843 21438 GYLPNQLFRTF True PC9_epitope_Rep1 1354.70337100434 1354.7022699358602 87.3 2 0.2004985766625713 0.0004751158094785604 0.0009440068799900467 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 137806 11068 YEQLSSEALEA True H1975_Epitope_Rep3 1238.56666231766 1238.5655699358601 47.665 2 0.20049778378726038 0.0004751158094785604 0.0009440241170187208 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 4113 10691 AHSIQIMKV True PC9_epitope_Rep5 1025.56918603065 1025.5680899358601 46.114 2 0.2004969976955318 0.0004751158094785604 0.0009440412068846186 ['ENSG00000105640|ENST00000222247|RPL18A'] 47756 16524 IYENRIYSL True PC9_epitope_Rep5 1169.6080736371698 1169.6069699358602 68.56 2 0.20049300912412574 0.0004751158094785604 0.0009441279243840289 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF', 'ENST00000430836.1_1_20:3342707-3342845:-|nuORF', 'ENST00000397758.2_1_3:175436135-175436456:-|nuORF'] 134889 10909 VYVQNVVKL True NCI_RA007_Epitope_Rep4 1060.6280808057597 1060.6269899358601 48.822 2 0.2004872075306004 0.0004751158094785604 0.0009442540739534571 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 797 6947 AAYEAELGDAR True H1975_Epitope_Rep3 1164.54111627616 1164.54000993586 31.683 2 0.20047918622134503 0.0004751158094785604 0.0009444285167582471 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 98423 6742 SFETTDESLR True NCI_RA007_Epitope_Rep3 1183.5356965425499 1183.5345899358601 33.61 2 0.2004715074169816 0.0004751158094785604 0.0009445955412439767 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000484852.1_1_3:147884522-147885023:-|nuORF', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 89556 20451 QYMELFNKI True PC9_epitope_Rep1 1184.5899810448798 1184.5888899358602 83.474 2 0.20046522264424468 0.0004751158094785604 0.0009447322656825298 ['ENSG00000124641|ENST00000265350|MED20'] 64787 19524 LQAPPLTSL True PC9_epitope_Rep4 938.5436824754601 938.54258993586 83.218 2 0.20046473317792746 0.0004751158094785604 0.0009447429147935814 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 76748 16909 NQVLNLIKA True PC9_epitope_Rep5 1011.6076797143498 1011.60658993586 70.055 2 0.20046164170029332 0.0004751158094785604 0.0009448101775426513 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 20833 12999 EQISDIDDAVR True PC9_epitope_Rep1 1259.59935942827 1259.5982699358601 54.871 2 0.20045996845262834 0.0004751158094785604 0.000944846585191033 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 21578 4895 ERQPGAASL True PC9_epitope_Rep2 927.4773938207899 927.47628993586 24.194 2 0.20045252119476256 0.0004751158094785604 0.000945008644705902 ['ENSG00000180921|ENST00000388913|FAM83H'] 132915 4858 VVMENVGQQK True NCI_RA007_Epitope_Rep4 1130.5753936098997 1130.5742899358602 25.133 2 0.2004520131453146 0.0004751158094785604 0.0009450197013676555 ['ENSG00000004700|ENST00000444129|RECQL'] 14625 10255 DVAYQYVK True PC9_epitope_Rep3 984.4916469026 984.49054993586 44.396 2 0.20044877709202485 0.0004751158094785604 0.0009450901305234092 ['ENSG00000106028|ENST00000265304|SSBP1', 'ENST00000489378.5_1_7:141438966-141445458:+|nuORF'] 118324 14604 TYMGHTGAVW True PC9_epitope_Rep1 1121.4964150132098 1121.4953099358602 60.998 2 0.20044771256702823 0.0004751158094785604 0.0009451132998947364 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 21346 18763 ERFNVPVSL True PC9_epitope_Rep2 1059.5712942056298 1059.57018993586 77.544 2 0.2004466762726845 0.0004751158094785604 0.0009451358553735036 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 91009 9446 RFEEKHAYF True PC9_epitope_Rep5 1225.5880068989297 1225.58635490379 41.289 3 0.20043728510316763 0.0004751158094785604 0.0009453402836180686 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 21194 10879 ERDMSNVSL True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 46.827 2 0.20043527279593104 0.0004751158094785604 0.0009453840935621562 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 104903 12845 SRDDNM[Oxidation]FQI True PC9_epitope_Rep5 1140.48697290876 1140.4858699358601 54.417 2 0.20043357151957714 0.0004751158094785604 0.0009454211336408111 ['ENSG00000113387|ENST00000265073|SUB1'] 97353 7978 SEDEWTSQA True H1975_Epitope_Rep3 1051.40943340027 1051.40887496793 35.659 1 0.200430000379654 0.0004751158094785604 0.0009454988890021544 ['ENSG00000179409|ENST00000319004|GEMIN4'] 48979 5161 KEFEGKTLV True NCI_RA007_Epitope_Rep3 1049.57571087973 1049.57460993586 27.294 2 0.20042443603125873 0.0004751158094785604 0.0009456200557937494 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 26939 9724 FLDQNLQKY True H1975_Epitope_Rep1 1167.59242357303 1167.5913299358601 42.33 2 0.20041998712652503 0.0004751158094785604 0.0009457169443800175 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 30061 19083 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6166049037902 78.432 3 0.2004180555709291 0.0004751158094785604 0.0009457590130445262 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 4847 11179 ALELDSNLYR True NCI_RA007_Epitope_Rep2 1192.60880191316 1192.6077099358602 48.064 2 0.2004134812467136 0.0004751158094785604 0.0009458586478515876 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 118276 20240 TYLPAPEGLKF True PC9_epitope_Rep5 1234.65977485686 1234.6586699358602 82.902 2 0.20040225152427357 0.0004751158094785604 0.0009461032906442393 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 26825 20197 FLASESLIKQI True PC9_epitope_Rep3 1247.71253870571 1247.7114499358602 82.946 2 0.20039872102722464 0.0004751158094785604 0.0009461802166674349 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 23863 23563 EYIQFVPLL True PC9_epitope_Rep2 1120.6168474157198 1120.61574993586 96.11 2 0.20039542491217618 0.0004751158094785604 0.0009462520414017078 ['ENSG00000179409|ENST00000319004|GEMIN4'] 106236 8092 STELNHLGY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 36.1 2 0.20039440124469884 0.0004751158094785604 0.0009462743489702603 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 27912 21066 FQEEDFPAL True PC9_epitope_Rep2 1094.4920408254197 1094.49094993586 86.487 2 0.20039148923618935 0.0004751158094785604 0.0009463378097945564 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 131170 12107 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60556993586 51.583 2 0.20038693338727281 0.0004751158094785604 0.0009464371030696732 ['ENSG00000168807|ENST00000336278|SNTB2'] 2993 18114 AFIEKHWTF True PC9_epitope_Rep1 1177.59202965021 1177.59092993586 74.468 2 0.20038628296732364 0.0004751158094785604 0.0009464512796174613 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 4318 22254 AIIPYIPTL True PC9_epitope_Rep4 999.60046907559 999.59936993586 93.839 2 0.20036192345108175 0.0004751158094785604 0.0009469823728035296 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 88625 13934 QTEEDYTLTMY True H1975_Epitope_Rep2 1392.5755127492 1392.57440993586 58.746 2 0.20035831664895629 0.0004751158094785604 0.0009470610347411398 ['nc|ENSG00000166206|P28472-3|GABRB3'] 140003 20903 YQDPVTLQL True PC9_epitope_Rep5 1075.55497543515 1075.5538699358601 85.459 2 0.20035563281244848 0.0004751158094785604 0.0009471195716693017 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 140732 13518 YSDAFLNDSY True H1975_Epitope_Rep3 1193.48768372097 1193.4871749679298 57.276 1 0.20034188923599935 0.0004751158094785604 0.0009474193885104312 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 21353 19219 ERFNVPVSL True PC9_epitope_Rep5 1059.5712942056298 1059.57018993586 78.966 2 0.2003288774841631 0.0004751158094785604 0.0009477033282751357 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 96126 14579 RYNPNLNTW True PC9_epitope_Rep3 1176.5676058075198 1176.56650993586 61.205 2 0.20032860513922857 0.0004751158094785604 0.0009477092722418679 ['ENSG00000178502|ENST00000319121|KLHL11'] 5488 7531 ALYDATYETK True H1975_Epitope_Rep3 1173.5553693579702 1173.55426993586 33.95 2 0.20032597731323248 0.0004751158094785604 0.0009477666268369269 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 82933 14370 PSDLTVGQFY True H1975_Epitope_Rep2 1125.5342399905699 1125.53367496793 60.424 1 0.200318428147201 0.0004751158094785604 0.0009479314133375006 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 41606 7410 IADMGHLKY True H1975_Epitope_Rep2 1046.52190148506 1046.5208099358601 33.445 2 0.20029716361912628 0.0004751158094785604 0.0009483957392437713 ['ENSG00000132646|ENST00000379143|PCNA'] 48407 21375 IYVHDLLTF True PC9_epitope_Rep1 1119.59644632431 1119.5953499358602 87.051 2 0.20029656589731065 0.0004751158094785604 0.0009484087942148448 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 52551 7613 KLFVGGIKED True NCI_RA007_Epitope_Rep4 1104.6179100448799 1104.6168099358601 35.936 2 0.2002906746008007 0.0004751158094785604 0.000948537476935059 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 7000 21818 AQLQDFDWQV True PC9_epitope_Rep3 1248.57750178488 1248.57640993586 89.221 2 0.2002853147751603 0.0004751158094785604 0.0009486545660277615 ['ENSG00000169019|ENST00000381571|COMMD8'] 7875 7808 ATAELIMSR True NCI_RA007_Epitope_Rep4 990.51681610462 990.51570993586 36.717 2 0.20028255623921706 0.0004751158094785604 0.0009487148338004379 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 90595 9177 REMEENFAVEA True H1975_Epitope_Rep3 1323.57651580871 1323.57540993586 40.289 2 0.20027874278451155 0.0004751158094785604 0.0009487981554860405 ['ENSG00000026025|ENST00000544301|VIM'] 111039 16767 THDEDFVEL True PC9_epitope_Rep5 1103.4771190372699 1103.4760299358602 69.499 2 0.2002777626531601 0.0004751158094785604 0.0009488195719505062 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 131153 5833 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 27.457 2 0.2002730675251459 0.0004751158094785604 0.0009489221700690935 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 28855 9265 FTDAGFEHY True H1975_Epitope_Rep1 1085.4454249861699 1085.4443299358602 40.549 2 0.20027217276164527 0.0004751158094785604 0.0009489417237378353 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 14350 5237 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 25.224 2 0.2002611398369845 0.0004751158094785604 0.0009491828644104334 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 75048 9909 NHSNQFTQL True PC9_epitope_Rep5 1087.50467119779 1087.50356993586 43.087 2 0.2002583413386819 0.0004751158094785604 0.00094924403944599 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A'] 68382 7979 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.51367496793 35.638 1 0.2002556907934252 0.0004751158094785604 0.000949301983881326 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 93365 10413 RPYQPLPEA True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 45.038 2 0.20024512068286832 0.0004751158094785604 0.0009495330958021461 ['ENSG00000165476|ENST00000373758|REEP3'] 40233 12828 HQIEAVDGEEL True PC9_epitope_Rep5 1238.5778957076998 1238.57678993586 54.353 2 0.20024510408703602 0.0004751158094785604 0.0009495334587088138 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 86114 20483 QHVQEWWEL True PC9_epitope_Rep2 1253.5829215184897 1253.58182993586 84.218 2 0.20023126006388148 0.0004751158094785604 0.0009498362390995962 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1'] 72305 9564 MIEPRTLQY True H1975_Epitope_Rep3 1149.58523001761 1149.5841299358601 41.796 2 0.200226100593491 0.0004751158094785604 0.0009499491058077819 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 74047 10793 NDLAVVDVR True PC9_epitope_Rep6 999.53490869691 999.53380993586 52.354 2 0.20022193922933684 0.0004751158094785604 0.0009500401481039983 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 26693 20669 FIVDPVSNL True PC9_epitope_Rep4 1002.53859709502 1002.53750993586 87.661 2 0.20021179292250343 0.0004751158094785604 0.0009502621656153808 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 32787 14723 GHFEKPLFL True PC9_epitope_Rep4 1086.58621599378 1086.5851099358601 64.566 2 0.20020464311151262 0.0004751158094785604 0.0009504186462303336 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6', 'PNPLA7|p.A228Lfs*27|1|0.31|ENSG00000130653|chr9:137522845-137522849|GTGCA/-|frameshift_variant', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 88893 9825 QVEEELTHLQK True PC9_epitope_Rep1 1352.6935941662798 1352.69194490379 42.653 3 0.20020090542231922 0.0004751158094785604 0.0009505004595041175 ['nc|ENSG00000167460|P67936-2|TPM4'] 133866 16687 VYGPMKNYL True PC9_epitope_Rep1 1083.5423025764699 1083.54120993586 69.014 2 0.20019249125753497 0.0004751158094785604 0.0009506846607422906 ['ENSG00000166825|ENST00000300060|ANPEP'] 65018 20573 LQIEDFEARI True PC9_epitope_Rep5 1232.6401020414398 1232.63900993586 84.181 2 0.2001882428303087 0.0004751158094785604 0.0009507776800753683 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 31946 16500 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 68.686 2 0.2001841179997287 0.0004751158094785604 0.0009508680019926102 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 137194 12552 YAYDGKDYLAL True H1975_Epitope_Rep2 1290.6132185872598 1290.6121299358601 53.375 2 0.20017176451464233 0.0004751158094785604 0.000951138559240302 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 40913 14604 HSQFLGYPITL True H1975_Epitope_Rep3 1274.6659228664598 1274.66482993586 61.543 2 0.20017135177671158 0.0004751158094785604 0.0009511476000657492 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 142409 18715 YYEYNHDLF True PC9_epitope_Rep5 1262.5244035828598 1262.5233099358602 77.006 2 0.2001689802404421 0.0004751158094785604 0.0009511995490950358 ['ENSG00000151748|ENST00000324679|SAV1'] 24063 12167 EYNSDLHQF True PC9_epitope_Rep5 1151.4883524273098 1151.48724993586 51.79 2 0.20015904898177925 0.0004751158094785604 0.0009514171264346086 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 14174 13126 DSDSDLQLY True H1975_Epitope_Rep1 1054.44548455582 1054.44497496793 55.582 1 0.2001555242427227 0.0004751158094785604 0.0009514943595981698 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 77492 6603 NTDDTIGDLK True H1975_Epitope_Rep3 1090.51423282198 1090.5131299358602 30.35 2 0.2001460598986254 0.0004751158094785604 0.0009517017709489988 ['ENSG00000198258|ENST00000586895|UBL5', 'ENST00000589372.1_1_19:9939013-9939570:+|nuORF'] 33403 14389 GLADNTVIAKV True PC9_epitope_Rep4 1099.62372370131 1099.62262993586 63.257 2 0.20014594910101016 0.0004751158094785604 0.0009517041993501644 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 115303 8539 TRHPENWTL True PC9_epitope_Rep2 1152.56760580752 1152.56650993586 38.207 2 0.20014535916031853 0.0004751158094785604 0.0009517171294502628 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 26174 12333 FHDESTQVQL True PC9_epitope_Rep1 1202.5567663402999 1202.5556699358601 52.296 2 0.20014407095700157 0.0004751158094785604 0.0009517453644225945 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 22297 8659 ETDIVVDHY True H1975_Epitope_Rep2 1089.49785448185 1089.4967499358602 38.266 2 0.20012371089552233 0.0004751158094785604 0.0009521917299170197 ['nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 129930 13636 VRTPYTMSY True PC9_epitope_Rep3 1116.52738078832 1116.5262899358602 57.516 2 0.20011428124558917 0.0004751158094785604 0.0009523985327581323 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 84245 18519 PYM[Oxidation]DSPQSIGF True PC9_epitope_Rep4 1256.53833977528 1256.53724993586 79.306 2 0.2001136223572541 0.0004751158094785604 0.0009524129846048171 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 78477 15659 NYNEKIYEL True PC9_epitope_Rep3 1184.5713537752797 1184.5702499358601 65.377 2 0.2001124528400885 0.0004751158094785604 0.0009524386369631192 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 44084 21253 IIMLEALERV True PC9_epitope_Rep2 1185.67913040245 1185.6780299358602 87.211 2 0.2001078849907417 0.0004751158094785604 0.0009525388354685128 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 71533 7182 MADKNIQYY True H1975_Epitope_Rep2 1144.52229540788 1144.52118993586 32.559 2 0.20010646814955163 0.0004751158094785604 0.0009525699168748025 ['ENSG00000148158|ENST00000374232|SNX30', 'ENST00000604751.1_1_9:115618996-115637523:+|nuORF'] 21166 12282 ERDAYVQAL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 52.27 2 0.20010269964256353 0.0004751158094785604 0.0009526525919916575 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 44414 6479 ILGIHNEVSK True NCI_RA007_Epitope_Rep1 1108.62405805448 1108.62296993586 29.223 2 0.20010256452019387 0.0004751158094785604 0.0009526555564975847 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 130052 11366 VSCRITDLY True H1975_Epitope_Rep2 1068.52738078832 1068.5262899358602 48.768 2 0.20010043167749858 0.0004751158094785604 0.0009527023510470882 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'SPTB|p.A69S|1|0.11|ENSG00000070182|chr14:64805034-64805034|C/A|missense_variant', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 95855 15980 RYKLYQEMF True PC9_epitope_Rep2 1276.6274291827597 1276.6263299358602 66.72 2 0.20009837856730264 0.0004751158094785604 0.0009527473984438128 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 134731 9457 VYTSGVYHI True NCI_RA007_Epitope_Rep2 1037.51819600361 1037.5170899358602 41.397 2 0.2000958307832991 0.0004751158094785604 0.0009528033024742728 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 106188 8352 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 37.078 2 0.2000908967863471 0.0004751158094785604 0.0009529115746624087 ['ENSG00000114315|ENST00000232424|HES1'] 111437 19954 THSQFIVVSL True PC9_epitope_Rep5 1129.6131590176099 1129.61206993586 81.805 2 0.2000892788855403 0.0004751158094785604 0.0009529470807473741 ['ENSG00000136824|ENST00000374793|SMC2'] 40718 8124 HRTDSEIAL True PC9_epitope_Rep3 1040.5250722892 1040.5239699358601 36.225 2 0.20008054928316588 0.0004751158094785604 0.0009531386815196962 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 90140 6369 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 29.426 2 0.20007189201933034 0.0004751158094785604 0.0009533287327329082 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 71298 21661 LYQDKFPFF True PC9_epitope_Rep5 1203.5964463243097 1203.5953499358602 88.366 2 0.20006649089011427 0.0004751158094785604 0.0009534473219132136 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 1261 7477 AEDGSRVYVV True H1975_Epitope_Rep2 1093.54038800017 1093.53928993586 33.708 2 0.20006611362150317 0.0004751158094785604 0.0009534556059144129 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF'] 88597 11330 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51748993586 48.559 2 0.20005756597823515 0.0004751158094785604 0.000953643312984339 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 108424 22610 SYLPFTEAF True PC9_epitope_Rep2 1073.5069626135698 1073.5058699358601 92.468 2 0.2000562829176449 0.0004751158094785604 0.0009536714923174271 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 139082 7631 YLDDPTVPR True H1975_Epitope_Rep3 1074.53457434374 1074.53346993586 34.335 2 0.20005443027721376 0.0004751158094785604 0.0009537121825722001 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153761151-153761283:-|nuORF'] 109775 10160 TEDWDQPVA True H1975_Epitope_Rep1 1059.45090428943 1059.45037496793 44.019 1 0.2000391888075486 0.0004751158094785604 0.0009540470029266362 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 5287 10985 ALQEMVHQV True PC9_epitope_Rep4 1053.52771514149 1053.52660993586 50.029 2 0.20003550387419955 0.0004751158094785604 0.000954127970208939 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 142605 16719 YYLTPDGQRF True PC9_epitope_Rep5 1258.59823722946 1258.5971499358602 69.317 2 0.20001668756868105 0.0004751158094785604 0.000954541519361425 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 108262 21538 SYIEHIFEI True PC9_epitope_Rep1 1149.57062549929 1149.5695299358601 87.671 2 0.19999676576426406 0.0004751158094785604 0.0009549795613431035 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 55031 8373 KYSLIKGNF True NCI_RA007_Epitope_Rep1 1068.59678067748 1068.59568993586 36.571 2 0.19999063388293786 0.0004751158094785604 0.0009551144301351663 ['ENSG00000143546|ENST00000368733|S100A8'] 22223 10567 ESYSIYVYK True NCI_RA007_Epitope_Rep1 1150.55464108198 1150.55354993586 45.087 2 0.19998478678643083 0.0004751158094785604 0.0009552430529669681 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 92586 5041 RMQKEITAL True NCI_RA007_Epitope_Rep3 1088.60121443492 1088.60010993586 26.824 2 0.19998177082342636 0.0004751158094785604 0.0009553094040881121 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 139065 10538 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 45.488 2 0.19998090570843702 0.0004751158094785604 0.0009553284374522866 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 25418 9496 FEDETIRNI True H1975_Epitope_Rep2 1135.55095268387 1135.54984993586 41.495 2 0.19997453483105906 0.0004751158094785604 0.0009554686146125464 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 70782 14010 LYANMFERL True NCI_RA007_Epitope_Rep5 1155.57466533391 1155.5735699358602 60.579 2 0.19997452880117536 0.0004751158094785604 0.0009554687472966609 ['ENSG00000004478|ENST00000001008|FKBP4'] 118523 16320 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 67.771 2 0.19996778769822277 0.0004751158094785604 0.000955617092938721 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 24857 17788 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 73.218 2 0.1999667145234003 0.0004751158094785604 0.0009556407115032324 ['ENSG00000204592|ENST00000376630|HLA-E'] 91542 9945 RIIDLVLQK True NCI_RA007_Epitope_Rep3 1096.6968290719199 1096.69572993586 46.2 2 0.19996581997356105 0.0004751158094785604 0.0009556603993143457 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 137576 6249 YEENSHLTSV True H1975_Epitope_Rep3 1177.52513185885 1177.5240299358602 29.048 2 0.19996290916331375 0.0004751158094785604 0.0009557244650581032 ['ENSG00000157557|ENST00000360938|ETS2'] 90275 8739 REEGPYEVEV True H1975_Epitope_Rep3 1205.55643198713 1205.55532993586 38.618 2 0.1999496585458585 0.0004751158094785604 0.0009560161601686942 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 93603 9341 RQPDSGISSI True PC9_epitope_Rep5 1058.5356369729 1058.53452993586 40.883 2 0.19994929456439067 0.0004751158094785604 0.0009560241740071809 ['ENSG00000163902|ENST00000296255|RPN1'] 7550 7205 ASEFPGAQHY True H1975_Epitope_Rep2 1105.48287312405 1105.48176993586 32.649 2 0.1999367004340839 0.0004751158094785604 0.0009563015024966641 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 90387 5336 REIAQDFKT True NCI_RA007_Epitope_Rep4 1106.5720224816198 1106.57092993586 27.089 2 0.19993620865054573 0.0004751158094785604 0.0009563123334309125 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 134182 16493 VYLPNINKI True PC9_epitope_Rep6 1072.62808080576 1072.6269899358601 75.867 2 0.19993558550322796 0.0004751158094785604 0.000956326057669328 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 129076 15459 VQPRNWLLF True NCI_RA007_Epitope_Rep3 1171.6502132326698 1171.64910993586 68.364 2 0.199919856089212 0.0004751158094785604 0.0009566725487689202 ['ENSG00000060762|ENST00000360961|MPC1'] 54588 13406 KYITQGQLLQF True NCI_RA007_Epitope_Rep5 1337.73433677945 1337.7332299358602 58.252 2 0.19991166621071269 0.0004751158094785604 0.000956853007109512 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 114119 4384 TPGPGAQSALR True H1975_Epitope_Rep3 1053.55670677065 1053.55560993586 21.983 2 0.1999095468302967 0.0004751158094785604 0.0009568997117594391 ['ENSG00000164587|ENST00000407193|RPS14'] 127150 9118 VLTVINQTQK True PC9_epitope_Rep3 1142.66592286646 1142.66482993586 40.01 2 0.19990532136692915 0.0004751158094785604 0.0009569928348469715 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 72209 14713 MHAETAFESL True PC9_epitope_Rep4 1134.5015599633 1134.50046993586 64.527 2 0.19990520541265963 0.0004751158094785604 0.0009569953904391115 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 96558 8559 SAELIEEEVAK True H1975_Epitope_Rep1 1216.61869789052 1216.6176099358602 37.848 2 0.19989839551780983 0.0004751158094785604 0.0009571454901795084 ['ENST00000502888.1_1_5:140062654-140070871:-|nuORF', 'ENST00000518126.5_1_5:140059363-140070889:-|nuORF', 'ENST00000506579.5_1_5:140058520-140070889:-|nuORF', 'nc|ENSG00000170445|P12081-3|HARS1', 'nc|ENSG00000170445|P12081-2|HARS1', 'nc|ENSG00000170445|P12081-4|HARS1', 'ENSG00000170445|ENST00000504156|HARS1'] 106235 7980 STELNHLGY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 35.665 2 0.1998978473200394 0.0004751158094785604 0.0009571575742625936 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 141091 12010 YSQDYQQFY True H1975_Epitope_Rep1 1240.5036681382799 1240.50256993586 51.204 2 0.19987845668946025 0.0004751158094785604 0.0009575851060135524 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000441812.6_1_3:50144918-50150831:+|nuORF', 'ENST00000494360.5_1_3:50144211-50147205:+|nuORF', 'ENST00000489437.1_1_3:50144918-50148299:+|nuORF'] 119417 14936 VAQLEQVYIR True PC9_epitope_Rep3 1217.6768219033297 1217.67572993586 62.585 2 0.19987314504566744 0.0004751158094785604 0.0009577022525007918 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 7582 8273 ASEYDQIRY True H1975_Epitope_Rep3 1143.51965255559 1143.5185499358602 36.803 2 0.19986877084246382 0.0004751158094785604 0.0009577987348477765 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000064393|Q9H2X6-2|HIPK2', 'nc|ENSG00000064393|Q9H2X6-3|HIPK2', 'ENSG00000064393|ENST00000406875|HIPK2'] 25469 12902 FEELNM[Oxidation]DLFR True H1975_Epitope_Rep1 1328.6070880414397 1328.6059899358602 54.7 2 0.1998673031596803 0.0004751158094785604 0.0009578311098944852 ['ENSG00000044574|ENST00000324460|HSPA5'] 75768 21818 NLLQVLEKV True PC9_epitope_Rep1 1054.63864548946 1054.63754993586 88.732 2 0.19986354616877566 0.0004751158094785604 0.0009579139889037834 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 106792 18060 SVADYFKQI True PC9_epitope_Rep6 1069.54441075145 1069.5433099358602 82.098 2 0.19986014454048617 0.0004751158094785604 0.0009579890348373909 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 77316 15521 NSDPNLHLL True PC9_epitope_Rep1 1021.5192586327701 1021.51816993586 64.524 2 0.19985536345270472 0.0004751158094785604 0.0009580945240538929 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 37911 9171 GYSFTTTAER True PC9_epitope_Rep2 1131.51965255559 1131.5185499358602 40.614 2 0.19985354640265018 0.0004751158094785604 0.0009581346182335357 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 106787 20199 SVADYFKQI True PC9_epitope_Rep3 1069.54441075145 1069.5433099358602 82.955 2 0.19985224321680728 0.0004751158094785604 0.0009581633747611458 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 74922 14116 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69592490379 66.166 3 0.1998366865938209 0.0004751158094785604 0.0009585067191674431 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 22224 10270 ESYSIYVYK True NCI_RA007_Epitope_Rep2 1150.55464108198 1150.55354993586 44.541 2 0.19982948991036908 0.0004751158094785604 0.0009586655962160733 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 115718 8146 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 38.017 2 0.19982814157635276 0.0004751158094785604 0.0009586953655494651 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 26323 17169 FHNELLTQL True PC9_epitope_Rep6 1113.5818588893299 1113.5807699358602 78.626 2 0.1998229912123898 0.0004751158094785604 0.0009588090869324478 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 139067 10575 YLDDPDLKY True H1975_Epitope_Rep2 1140.5339056374 1140.53280993586 45.699 2 0.19981949044851952 0.0004751158094785604 0.0009588863924368665 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 38275 7656 HEEMNYITA True H1975_Epitope_Rep2 1106.47025983502 1106.46916993586 34.402 2 0.19981828209121896 0.0004751158094785604 0.0009589130773988283 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 64852 14002 LQDPNHLTL True PC9_epitope_Rep5 1049.55055876105 1049.54946993586 58.878 2 0.19981094449462647 0.0004751158094785604 0.0009590751344419074 ['ENSG00000188997|ENST00000340067|KCTD21'] 118082 18999 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 81.171 2 0.19981000529295367 0.0004751158094785604 0.0009590958794900414 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 134714 11398 VYTPVASRQSL True PC9_epitope_Rep5 1219.65608645875 1219.6549899358602 48.84 2 0.1998002875030279 0.0004751158094785604 0.0009593105520548893 ['ENSG00000070950|ENST00000264926|RAD18'] 90569 8411 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 37.28 2 0.19979696463682373 0.0004751158094785604 0.0009593839674762585 ['ENSG00000026025|ENST00000544301|VIM'] 88207 10283 QRYSEDRIGL True PC9_epitope_Rep5 1235.6258489596298 1235.62420490379 44.541 3 0.19978887737552897 0.0004751158094785604 0.00095956267101077 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 34712 6455 GQDVGRYQV True PC9_epitope_Rep6 1020.49885754136 1020.49776993586 33.462 2 0.19978768406593897 0.0004751158094785604 0.0009595890422988241 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 68387 8153 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 36.34 2 0.19977769076957866 0.0004751158094785604 0.0009598099155298456 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 24485 7484 FAEHNDLQY True H1975_Epitope_Rep1 1135.4934378077498 1135.4923499358601 33.784 2 0.19976945154883427 0.0004751158094785604 0.0009599920582833799 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 7883 7293 ATAGIIGVNR True NCI_RA007_Epitope_Rep2 970.5559784946599 970.55488993586 32.989 2 0.1997641632248245 0.0004751158094785604 0.00096010898443606 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 87931 20336 QRLETILSL True PC9_epitope_Rep1 1071.62880908175 1071.6277099358601 83.053 2 0.19975230915324133 0.0004751158094785604 0.0009603711327841483 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 104926 11391 SRDDTTLNAL True PC9_epitope_Rep1 1104.54111627616 1104.54000993586 48.695 2 0.19974601811444412 0.0004751158094785604 0.0009605102859035221 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 112873 10203 TLKIPAM[Oxidation]TIAK True PC9_epitope_Rep3 1201.7104309111699 1201.70878490379 44.197 3 0.19974454129692087 0.0004751158094785604 0.0009605429549439018 ['ENSG00000144381|ENST00000388968|HSPD1'] 105108 7249 SREPSQMEM True PC9_epitope_Rep1 1093.4532298718898 1093.45212993586 32.697 2 0.19974035393685502 0.0004751158094785604 0.0009606355906157686 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 89570 19727 QYMKIISSF True PC9_epitope_Rep5 1115.5685173243098 1115.56740993586 80.926 2 0.19974034973263904 0.0004751158094785604 0.0009606356836288401 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 88842 5917 QVASTLKQV True PC9_epitope_Rep4 972.5603951687598 972.55928993586 29.668 2 0.19973954274926922 0.0004751158094785604 0.00096065353730381 ['ENSG00000166295|ENST00000299381|ANAPC16'] 29473 7855 FVETESVRY True H1975_Epitope_Rep1 1128.54513902744 1128.5440499358601 35.166 2 0.19973463976303385 0.0004751158094785604 0.0009607620179717975 ['ENSG00000095139|ENST00000264028|ARCN1'] 70764 13936 LYADVGGKQF True PC9_epitope_Rep1 1096.55530978832 1096.5542099358602 58.441 2 0.19973091360091905 0.0004751158094785604 0.0009608444691186221 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 73189 11278 MRYNEKELQAL True PC9_epitope_Rep4 1393.70238502817 1393.70074490379 51.158 3 0.199727839068087 0.0004751158094785604 0.0009609125065951756 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 923 7390 ADMGHLKY True H1975_Epitope_Rep2 933.43783750793 933.43674993586 33.367 2 0.19972685629700154 0.0004751158094785604 0.0009609342557197909 ['ENSG00000132646|ENST00000379143|PCNA'] 105289 14263 SRMDGEGQLTL True PC9_epitope_Rep1 1205.5710365054497 1205.56992993586 59.686 2 0.1997230004242367 0.0004751158094785604 0.0009610195925237379 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 28901 7819 FTDGITRTY True H1975_Epitope_Rep2 1072.5189242796 1072.5178299358602 35.023 2 0.19968915597250794 0.0004751158094785604 0.000961768952084767 ['ENST00000294309.7_2_11:68821527-68822650:+|nuORF'] 134861 11060 VYVKDLSSF True NCI_RA007_Epitope_Rep5 1056.54916177872 1056.5480699358602 49.177 2 0.1996798186595624 0.0004751158094785604 0.0009619757952836828 ['ENSG00000101350|ENST00000375712|KIF3B'] 48340 21131 IYSIDFTRF True PC9_epitope_Rep5 1160.5866099165999 1160.58550993586 86.342 2 0.1996646140533767 0.0004751158094785604 0.0009623127081485338 ['ENSG00000175970|ENST00000344651|UNC119B'] 133969 18400 VYINTAQEF True PC9_epitope_Rep5 1083.5236753068698 1083.52256993586 75.794 2 0.19965478312963392 0.0004751158094785604 0.0009625306106955292 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 54390 14559 KYFEKQFEL True PC9_epitope_Rep2 1230.6284747285797 1230.62683490379 61.272 3 0.199648468035071 0.0004751158094785604 0.0009626706109466757 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 41308 17821 HVVDFFNRV True PC9_epitope_Rep3 1131.58252759567 1131.5814299358601 73.746 2 0.1996346921575716 0.0004751158094785604 0.0009629760812481958 ['ENSG00000172081|ENST00000357066|MOB3A'] 68063 16448 LTDLVDDNYF True H1975_Epitope_Rep2 1213.5502839775302 1213.54918993586 68.486 2 0.19962626858578897 0.0004751158094785604 0.0009631629158623228 ['ENSG00000174231|ENST00000304992|PRPF8'] 65788 11846 LSDIASALRY True H1975_Epitope_Rep3 1107.59242357303 1107.5913299358601 50.714 2 0.1996059877652504 0.0004751158094785604 0.0009636128931010522 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000518647.5_1_8:42129618-42174557:+|nuORF', 'ENST00000520201.5_1_8:42129679-42177019:+|nuORF', 'IKBKB|p.Q154Rfs*7|1|0.11|ENSG00000104365|chr8:42305259-42305259|A/-|frameshift_variant', 'nc|ENSG00000104365|O14920-3|IKBKB'] 48948 6518 KEEFQQYAA True H1975_Epitope_Rep3 1112.5138388991602 1112.51274993586 30.042 2 0.19960380627975954 0.0004751158094785604 0.0009636613069940101 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 60995 7173 LIEGSINSVR True H1975_Epitope_Rep1 1086.6033226099 1086.6022299358601 32.612 2 0.1995958664360146 0.0004751158094785604 0.0009638375372187614 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'nc|ENSG00000241553|P59998-2|ARPC4'] 76431 5946 NQELQEINR True NCI_RA007_Epitope_Rep1 1142.5679997303398 1142.5669099358602 27.175 2 0.19959097599002185 0.0004751158094785604 0.000963946100073459 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 107535 16104 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 69.882 2 0.19959053641285018 0.0004751158094785604 0.0009639558588337336 ['ENSG00000073756|ENST00000367468|PTGS2'] 84416 9265 QADPTKLEL True NCI_RA007_Epitope_Rep3 1013.5393253710099 1013.53822993586 43.552 2 0.19958916951584613 0.0004751158094785604 0.0009639862050375974 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000523219.1_1_5:159833399-159834623:-|nuORF', 'ENST00000520841.1_1_5:159833399-159835410:-|nuORF'] 99620 4567 SIFKQPVTK True NCI_RA007_Epitope_Rep3 1046.61243074162 1046.61132993586 24.846 2 0.19958881216593052 0.0004751158094785604 0.0009639941386487548 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 97322 9584 SEAPKSWMV True H1975_Epitope_Rep2 1033.49026700361 1033.4891699358602 41.841 2 0.19958687914335094 0.0004751158094785604 0.0009640370552816499 ['ENSG00000154760|ENST00000285013|SLFN13'] 78270 12036 NYIEKVVAI True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 53.297 2 0.19958251395632293 0.0004751158094785604 0.0009641339774581295 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 106172 12621 STDPLDAGVDY True H1975_Epitope_Rep2 1151.4982484046698 1151.49767496793 53.644 1 0.199582214807144 0.0004751158094785604 0.000964140619957324 ['ENSG00000139645|ENST00000267116|ANKRD52'] 17248 14303 EHAFAVQQL True PC9_epitope_Rep5 1041.5243440132099 1041.5232499358601 60.019 2 0.19958197192183935 0.0004751158094785604 0.0009641460131713226 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 4141 8655 AHTAEVNCL True PC9_epitope_Rep1 956.43856578392 956.43746993586 38.13 2 0.19958059782237816 0.0004751158094785604 0.0009641765253130412 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 108369 17865 SYLENVDHF True PC9_epitope_Rep1 1122.49818883502 1122.49708993586 73.51 2 0.19957249417666456 0.0004751158094785604 0.0009643564880146262 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 40193 18227 HQFESSFEL True PC9_epitope_Rep3 1122.4981888350198 1122.49708993586 75.323 2 0.1995715010423788 0.0004751158094785604 0.0009643785454825671 ['ENSG00000197442|ENST00000359015|MAP3K5'] 98026 8787 SEQFTAM[Oxidation]FR True NCI_RA007_Epitope_Rep2 1131.5018946969099 1131.5007899358602 38.826 2 0.19956689100739558 0.0004751158094785604 0.0009644809407782912 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 21351 18053 ERFNVPVSL True PC9_epitope_Rep4 1059.5712942056298 1059.57018993586 77.504 2 0.1995547573598446 0.0004751158094785604 0.0009647504981021832 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 96621 19772 [Acetylation]-SAHLQWMVVR True PC9_epitope_Rep3 1267.64956192597 1267.64846993586 81.281 2 0.19955464361750574 0.0004751158094785604 0.0009647530253238627 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 4853 6521 ALELEQER True NCI_RA007_Epitope_Rep2 986.50327421546 986.50216993586 29.975 2 0.1995542140646761 0.0004751158094785604 0.0009647625695449971 ['ENSG00000147065|ENST00000360270|MSN'] 134275 12221 VYNKVHITL True PC9_epitope_Rep5 1085.62332977849 1085.62222993586 51.995 2 0.19952468086180108 0.0004751158094785604 0.0009654189939817398 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 138262 13892 YGYPDPSYL True H1975_Epitope_Rep2 1073.47057710485 1073.47007496793 58.58 1 0.19952450654378667 0.0004751158094785604 0.0009654228698182339 ['ENSG00000163840|ENST00000296161|DTX3L', 'nc|ENSG00000163840|Q8TDB6-2|DTX3L'] 47387 16210 IVIRGLNTI True PC9_epitope_Rep4 997.62841515893 997.62730993586 70.296 2 0.19952231684245217 0.0004751158094785604 0.0009654715575919526 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 75139 16114 NHYNNIMAL True PC9_epitope_Rep3 1088.50731405008 1088.5062099358602 67.134 2 0.19952230743842658 0.0004751158094785604 0.0009654717666947597 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 24526 22466 FAFQAEIAQL True PC9_epitope_Rep5 1136.5866099165999 1136.58550993586 91.418 2 0.19951763615538143 0.0004751158094785604 0.0009655756404234538 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'HSP90AA1|p.T19S|1|0.38|ENSG00000080824|chr14:102086324-102086324|T/A|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 104284 17369 SQIHDIVLV True PC9_epitope_Rep5 1022.5760452328999 1022.57494993586 71.81 2 0.19949148990294513 0.0004751158094785604 0.0009661572526879598 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 96007 17060 RYLNEFEEL True PC9_epitope_Rep6 1211.5822528121498 1211.5811499358601 78.185 2 0.1994901725563691 0.0004751158094785604 0.0009661865657972064 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 19489 8173 ELPDPQESIQR True H1975_Epitope_Rep3 1310.64664397386 1310.6455499358601 36.417 2 0.19948867074131024 0.0004751158094785604 0.0009662199847189591 ['CON__Q29443', 'CON__Q0IIK2'] 17775 18437 EHSLPTLGL True PC9_epitope_Rep3 965.51819600361 965.51708993586 76.121 2 0.19948715788842353 0.0004751158094785604 0.0009662536504304046 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 85891 15767 QHFEFEYQT True PC9_epitope_Rep3 1227.5196525555898 1227.5185499358602 65.806 2 0.19948515765754976 0.0004751158094785604 0.0009662981636332636 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 103177 13632 SPIENIQRVAA True PC9_epitope_Rep3 1196.6513354314802 1196.6502299358601 57.501 2 0.19947815132719343 0.0004751158094785604 0.000966454098954921 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 138425 15047 YHILGNEM True PC9_epitope_Rep5 975.44840219163 975.44730993586 62.883 2 0.19947805526205709 0.0004751158094785604 0.0009664562371893272 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 38227 5928 HEDFEKSLSA True H1975_Epitope_Rep2 1161.53021723929 1161.52912993586 27.786 2 0.19947669640683613 0.0004751158094785604 0.0009664864833318707 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 65263 12666 LQTSIREEI True PC9_epitope_Rep1 1087.5873381925899 1087.58624993586 53.591 2 0.19947223947584058 0.0004751158094785604 0.0009665856948021704 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 88600 11365 QTDPVTLQY True H1975_Epitope_Rep2 1063.51858992643 1063.51807496793 48.764 1 0.19946209853808894 0.0004751158094785604 0.0009668114705591916 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 97924 5843 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 27.463 2 0.19945781026688905 0.0004751158094785604 0.0009669069596593156 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 53825 14777 KTETEPVFWYY True H1975_Epitope_Rep3 1461.6816325002499 1461.68052993586 62.218 2 0.19945109473747133 0.0004751158094785604 0.000967056516747711 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 11702 8068 DGYNYTLSK True NCI_RA007_Epitope_Rep1 1059.48728979815 1059.48618993586 35.381 2 0.1994365465307757 0.0004751158094785604 0.0009673805897523562 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 38598 14156 HEYPWILSA True H1975_Epitope_Rep3 1114.54474510462 1114.54364993586 59.783 2 0.19942451261464775 0.0004751158094785604 0.0009676487372151276 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 126025 10648 VLDVETGNEY True H1975_Epitope_Rep2 1137.51898384925 1137.51847496793 45.981 1 0.19942303917187362 0.0004751158094785604 0.0009676815745368629 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 133721 22403 VYDPLFSQL True PC9_epitope_Rep3 1080.54916177872 1080.5480699358602 91.452 2 0.1994163985474193 0.0004751158094785604 0.0009678295821553747 ['ENSG00000100104|ENST00000215917|SRRD'] 131003 13653 VTDPTGFLRM True H1975_Epitope_Rep1 1135.5695799534699 1135.56848993586 57.649 2 0.1994137570908277 0.0004751158094785604 0.0009678884618001583 ['ENSG00000100154|ENST00000397906|TTC28'] 54345 15318 KYEELFPAF True NCI_RA007_Epitope_Rep5 1142.5648118428596 1142.56370993586 65.62 2 0.19940725382350366 0.0004751158094785604 0.0009680334388220669 ['ENSG00000105402|ENST00000263354|NAPA'] 5018 20905 ALIEKLVEL True PC9_epitope_Rep3 1026.63249747986 1026.6314099358601 85.686 2 0.19940591675196204 0.0004751158094785604 0.0009680632487917951 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 61056 19535 LIGEFLEKV True PC9_epitope_Rep4 1046.60119735158 1046.60010993586 83.263 2 0.19940500664301786 0.0004751158094785604 0.0009680835401698572 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 1930 7836 AEILNGKEISA True H1975_Epitope_Rep1 1143.61355294043 1143.61244993586 35.091 2 0.1993950748933745 0.0004751158094785604 0.0009683050017022023 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 17435 5625 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51766490379 27.021 3 0.19939451558781476 0.0004751158094785604 0.0009683174747989018 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 76758 7582 NQWDGTQHGV True PC9_epitope_Rep2 1140.49483479008 1140.49372993586 34.533 2 0.1993879265596164 0.0004751158094785604 0.0009684644291234756 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 115182 7705 TRDPQFQKL True PC9_epitope_Rep5 1131.6036569630699 1131.6020249037902 34.58 3 0.1993805533647404 0.0004751158094785604 0.00096862889914281 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 130923 10771 VTDFPGFDER True H1975_Epitope_Rep1 1181.5353026197297 1181.5342099358602 46.392 2 0.19937906985786022 0.0004751158094785604 0.0009686619943431912 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 58850 13992 LESTPSPVVF True H1975_Epitope_Rep2 1074.55972646242 1074.5586299358602 58.969 2 0.19936439013214755 0.0004751158094785604 0.000968989541970609 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 28563 4730 FSETGGGEKY True H1975_Epitope_Rep3 1073.4665543535698 1073.46544993586 23.319 2 0.19936270110611917 0.0004751158094785604 0.0009690272362072579 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 31663 10106 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 43.811 2 0.19936186075324738 0.0004751158094785604 0.00096904599103091 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 140372 10375 YRDPYTGQSV True PC9_epitope_Rep4 1184.5462016566 1184.5451099358602 47.608 2 0.19936047109480903 0.0004751158094785604 0.0009690770059426516 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 116606 23004 TVADVVLWSV True PC9_epitope_Rep5 1087.59136094387 1087.59026993586 93.475 2 0.19935681058665067 0.0004751158094785604 0.0009691587072843386 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 42044 14796 IDIIPNPQER True PC9_epitope_Rep2 1193.64043639461 1193.6393299358601 62.176 2 0.199351223183991 0.0004751158094785604 0.0009692834295988494 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 133523 19568 VWMRSPLSTF True PC9_epitope_Rep4 1222.61686449906 1222.61576993586 83.391 2 0.19934695270668948 0.0004751158094785604 0.0009693787662846038 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 78029 5254 NVSDAVAQSTR True NCI_RA007_Epitope_Rep1 1146.5629143499002 1146.56180993586 24.519 2 0.19934197465217718 0.0004893964110929853 0.0009694899112168569 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 78144 12771 NYAFLHRTL True PC9_epitope_Rep2 1133.59817765981 1133.59654490379 54.428 3 0.19934117155260517 0.0004893964110929853 0.000969507843203486 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 40333 11951 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5439899358599 53.759 2 0.19933846156799007 0.0004893964110929853 0.0009695683554751356 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 112134 20557 TIYKDFVYI True PC9_epitope_Rep1 1160.6117620352798 1160.6106699358602 83.885 2 0.19933267099477528 0.0004893964110929853 0.0009696976680687564 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 46331 10658 ISQSGDFLRY True H1975_Epitope_Rep2 1184.5825871653199 1184.5814899358602 46.02 2 0.19933237104667395 0.0004893964110929853 0.0009697043668520494 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000489038.5_1_7:33016023-33032371:+|nuORF', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 44681 13354 ILTDITKGV True PC9_epitope_Rep6 958.5698972233 958.56880993586 63.028 2 0.19932966750548536 0.0004893964110929853 0.0009697647475133974 ['ENSG00000167658|ENST00000309311|EEF2'] 92872 6386 RPFQGTM[Oxidation]GV True PC9_epitope_Rep4 1007.4858507099498 1007.48474993586 31.652 2 0.1993232048841978 0.0004893964110929853 0.000969909098432724 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 27710 9275 FPM[Oxidation]PGFDEH True H1975_Epitope_Rep1 1091.43823181119 1091.4371299358602 40.588 2 0.19932146599158954 0.0004893964110929853 0.0009699479425039764 ['ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000554467.5_1_12:57627991-57628141:+|nuORF'] 7152 6560 AQYEDIANR True PC9_epitope_Rep2 1078.5043368446197 1078.5032299358602 30.645 2 0.19931722876490995 0.0004893964110929853 0.000970042601883098 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 65322 6435 LRDEHNYTL True PC9_epitope_Rep4 1159.56218607391 1159.56055490379 31.848 3 0.19931319444857776 0.0004893964110929853 0.0009701327368672793 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 137478 9250 YEEDSYSHIMA True H1975_Epitope_Rep3 1343.53398229039 1343.53288993586 40.572 2 0.19931010515371983 0.0004893964110929853 0.0009702017637923876 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 135184 6997 WEQRTATVV True H1975_Epitope_Rep3 1088.56145779792 1088.56036993586 31.876 2 0.1993076325905759 0.0004893964110929853 0.0009702570140684709 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 68061 16337 LTDLVDDNYF True H1975_Epitope_Rep1 1213.5502839775302 1213.54977496793 68.197 1 0.19930497267799244 0.0004893964110929853 0.0009703164542554346 ['ENSG00000174231|ENST00000304992|PRPF8'] 2502 5767 AEQMASVQNA True H1975_Epitope_Rep2 1047.46550880775 1047.4644099358602 27.177 2 0.19930460634445776 0.0004893964110929853 0.0009703246408759014 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 62149 14740 LLEKEILFY True H1975_Epitope_Rep2 1166.6587122276999 1166.6576099358601 61.858 2 0.1993008661856238 0.0004893964110929853 0.0009704082278535406 ['ENSG00000153147|ENST00000283131|SMARCA5'] 140358 13303 YRDPTTVTTL True PC9_epitope_Rep3 1165.59790287629 1165.5968099358602 56.203 2 0.1992940326761025 0.0004893964110929853 0.000970560965259924 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 87715 7202 QRAITGASL True PC9_epitope_Rep2 915.5137793295099 915.51268993586 33.093 2 0.1992938570991788 0.0004893964110929853 0.000970564889939418 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 106301 11626 STFQQMWISK True NCI_RA007_Epitope_Rep3 1254.60669373818 1254.60558993586 52.851 2 0.1992830488764853 0.0004893964110929853 0.0009708065173135393 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 6693 15117 AQAEVYKELRL True PC9_epitope_Rep3 1318.7245003717399 1318.72285490379 63.284 3 0.19928226971989957 0.0004893964110929853 0.0009708239383788918 ['ENSG00000169710|ENST00000306749|FASN'] 95765 14553 RYIANTVEL True PC9_epitope_Rep5 1077.58185888933 1077.5807699358602 60.978 2 0.1992810676549471 0.0004893964110929853 0.0009708508158148483 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 57571 9855 LEDSRLFTA True H1975_Epitope_Rep2 1050.5345743437401 1050.53346993586 42.893 2 0.1992797154025847 0.0004893964110929853 0.0009708810522411957 ['ENST00000551157.6_1_12:53896788-53897526:+|nuORF'] 27790 22316 FQAEIAQLMSL True PC9_epitope_Rep4 1249.63765951329 1249.63656993586 94.078 2 0.19925790912187313 0.0004893964110929853 0.0009713687721276217 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 86209 19646 QIIRELQVL True PC9_epitope_Rep1 1110.67609362734 1110.6749899358601 80.393 2 0.1992577145986151 0.0004893964110929853 0.0009713731239457675 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 138600 5880 YIDQEELNK True NCI_RA007_Epitope_Rep5 1150.5506183307 1150.5495299358602 29.304 2 0.19925016574900284 0.0004893964110929853 0.0009715420197318068 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 32637 7410 GGNFGFGDSR True H1975_Epitope_Rep3 1012.4362572847999 1012.43516993586 33.48 2 0.1992458198872136 0.0004893964110929853 0.0009716392661484708 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 42632 4619 IEHDVVMKA True H1975_Epitope_Rep3 1040.5324661687598 1040.53136993586 22.889 2 0.199235390647826 0.0004893964110929853 0.0009718726788242032 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 24846 11653 FAYDGKDYL True NCI_RA007_Epitope_Rep1 1090.4971262058598 1090.4960299358602 49.3 2 0.1992353368682865 0.0004893964110929853 0.0009718738825884913 ['ENSG00000204592|ENST00000376630|HLA-E'] 62105 7606 LLEDKHFQSY True H1975_Epitope_Rep3 1278.6244519773 1278.6228149037902 34.238 3 0.19922979665358376 0.0004893964110929853 0.0009719978989622966 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 96129 14444 RYNPNLNTW True PC9_epitope_Rep5 1176.5676058075198 1176.56650993586 60.56 2 0.19922686130647366 0.0004893964110929853 0.0009720636124331004 ['ENSG00000178502|ENST00000319121|KLHL11'] 13897 9778 DQVANSAFVER True PC9_epitope_Rep2 1234.59421447818 1234.5931099358602 42.949 2 0.19922602057137062 0.0004893964110929853 0.000972082434749114 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 17443 6751 EHDTTEYKL True PC9_epitope_Rep5 1134.51931820242 1134.51766490379 30.939 3 0.19922459868621045 0.0004893964110929853 0.0009721142686419105 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 133720 22506 VYDPLFSQL True PC9_epitope_Rep1 1080.54916177872 1080.5480699358602 91.37 2 0.19922371010752826 0.0004893964110929853 0.0009721341631271143 ['ENSG00000100104|ENST00000215917|SRRD'] 53807 8983 KTDSDSDLQLY True H1975_Epitope_Rep2 1283.58812603823 1283.58702993586 39.507 2 0.19921478344466026 0.0004893964110929853 0.0009723340458132658 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 26428 12158 FIASKGVKLV True PC9_epitope_Rep5 1060.66446631448 1060.6633699358601 51.755 2 0.19921037089832502 0.0004893964110929853 0.0009724328652158288 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 115836 18846 TSDTQWGWFY True H1975_Epitope_Rep1 1289.53530261973 1289.5342099358602 78.589 2 0.19918114752650024 0.0004893964110929853 0.0009730875797396531 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11'] 142488 22379 YYIEGIENSVF True PC9_epitope_Rep1 1332.62378327096 1332.62268993586 90.896 2 0.19917892379036772 0.0004893964110929853 0.0009731374179703839 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 106191 8233 STDPSVLGKY True H1975_Epitope_Rep3 1065.5342399905699 1065.5331499358601 36.651 2 0.19917590742049124 0.0004893964110929853 0.000973205024748557 ['ENSG00000114315|ENST00000232424|HES1'] 5082 9136 ALLEVVQSGGK True H1975_Epitope_Rep3 1099.62372370131 1099.62262993586 40.131 2 0.19916442631164982 0.0004893964110929853 0.0009734623972782847 ['ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8', 'ENST00000484488.5_1_20:60711915-60714832:-|nuORF'] 29530 16452 FVHDLVLYL True NCI_RA007_Epitope_Rep5 1117.6171817688898 1117.6160899358601 70.041 2 0.19915917393497834 0.0004893964110929853 0.0009735801627959515 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 78611 21059 NYSPYVNYF True PC9_epitope_Rep3 1165.50802524273 1165.5069299358602 86.285 2 0.19915373480885581 0.0004893964110929853 0.0009737021305519407 ['ENSG00000156162|ENST00000414645|DPY19L4'] 3515 10052 AGLQFPVGR True H1975_Epitope_Rep2 943.5239500903898 943.52284993586 43.657 2 0.1991514355442337 0.0004893964110929853 0.0009737536942043759 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 118635 18661 TYSPALNKMF True PC9_epitope_Rep3 1170.5743309807401 1170.5732299358601 76.997 2 0.1991493201380729 0.0004893964110929853 0.0009738011370381434 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 142842 20029 YYTDIMHTL True PC9_epitope_Rep1 1155.5270464351497 1155.5259499358601 81.869 2 0.19913719386554612 0.0004893964110929853 0.0009740731412385791 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 35475 6047 GSLDQVLKK True NCI_RA007_Epitope_Rep4 986.5760452328999 986.57494993586 29.877 2 0.19912845692770503 0.0004893964110929853 0.0009742691665577264 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1'] 73693 20891 MYPYIFHVL True PC9_epitope_Rep4 1181.59433814933 1181.59324993586 88.515 2 0.199124928538624 0.0004893964110929853 0.0009743483420748216 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 73695 19748 MYPYIFHVL True PC9_epitope_Rep6 1181.59433814933 1181.59324993586 88.621 2 0.19911071631942004 0.0004893964110929853 0.0009746673234418928 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 106131 7844 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58028490379 35.148 3 0.19909503624985403 0.0004893964110929853 0.0009750193709918588 ['ENSG00000168090|ENST00000303904|COPS6'] 9759 17239 AYIERMNYI True PC9_epitope_Rep1 1171.5695799534699 1171.56848993586 71.128 2 0.19909296320223363 0.0004893964110929853 0.000975065924418877 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 87748 11605 QRATIDPEL True PC9_epitope_Rep5 1041.5454733806098 1041.54436993586 49.635 2 0.1990907728701548 0.0004893964110929853 0.0009751151140680324 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1'] 46612 15960 ITDFSPEWSY True H1975_Epitope_Rep2 1243.5397192938299 1243.5386299358602 66.588 2 0.19908635263557586 0.0004893964110929853 0.0009752143896025349 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2'] 9902 14062 AYLLNLNHL True NCI_RA007_Epitope_Rep4 1069.59202965021 1069.59092993586 61.372 2 0.19908608315183457 0.0004893964110929853 0.0009752204423562814 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 55059 9286 KYTKIFNDF True NCI_RA007_Epitope_Rep3 1174.60225998074 1174.60116993586 43.632 2 0.19908563438567373 0.0004893964110929853 0.000975230521975853 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 40737 6699 HRTELETKL True PC9_epitope_Rep3 1125.61422164677 1125.61258490379 30.791 3 0.1990816462217164 0.0004893964110929853 0.0009753201036752893 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 77330 13481 NSDVSLLNY True H1975_Epitope_Rep3 1023.48728979815 1023.4861899358599 57.131 2 0.1990782715608158 0.0004893964110929853 0.0009753959113822661 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 71919 6797 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep2 1282.5975859869 1282.59648993586 31.061 2 0.1990718433649065 0.0004893964110929853 0.0009755403294369438 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 31963 6155 GEPPKDYRIP True H1975_Epitope_Rep2 1170.6033226098998 1170.60166490379 28.647 3 0.1990707609897064 0.0004893964110929853 0.0009755646485587548 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 48132 14292 IYPELQIERF True NCI_RA007_Epitope_Rep5 1306.6921376142998 1306.69104993586 61.667 2 0.19906867518637197 0.0004893964110929853 0.0009756115147113657 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.G345Efs*28|1|0.53|ENSG00000077420|chr10:26536206-26536206|G/-|frameshift_variant'] 10082 14648 AYTLLLHTW True NCI_RA007_Epitope_Rep3 1116.59678067748 1116.59568993586 64.987 2 0.1990659849094782 0.0004893964110929853 0.0009756719661834113 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 11999 6279 DHQREITSL True PC9_epitope_Rep4 1097.54653600977 1097.54542993586 31.207 2 0.19904597785255196 0.0004893964110929853 0.000976121649678939 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1'] 39449 13589 HLAIKLEQV True PC9_epitope_Rep1 1049.62332977849 1049.62222993586 57.125 2 0.19904498707720208 0.0004893964110929853 0.0009761439239880932 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 24319 15364 EYVEKFYRI True PC9_epitope_Rep5 1245.6393737654498 1245.63772490379 64.107 3 0.1990369159907981 0.0004893964110929853 0.0009763253946806866 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 65804 12616 LSDISVVSNY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 53.625 2 0.1990314031194772 0.0004893964110929853 0.0009764493657893303 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 12154 12439 DIEDVFYK True H1975_Epitope_Rep1 1027.48622716899 1027.4851299358602 52.884 2 0.19902688001528335 0.0004893964110929853 0.0009765510912245684 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 88243 6171 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 28.709 2 0.19902450384305193 0.0004893964110929853 0.0009766045360279432 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 78304 17180 NYIPRFWTF True NCI_RA007_Epitope_Rep5 1242.6185787512197 1242.61748993586 72.856 2 0.19901859989289064 0.0004893964110929853 0.0009767373402184353 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 22234 9492 ESYSVYVYK True NCI_RA007_Epitope_Rep1 1136.5389910178399 1136.5378899358602 40.916 2 0.19901423265033585 0.0004893964110929853 0.0009768355891698526 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 9082 8698 AVIGADSVTLK True NCI_RA007_Epitope_Rep5 1072.61282466444 1072.61172993586 40.123 2 0.1990120384346093 0.0004893964110929853 0.0009768849557272921 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 22410 4748 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56219490379 23.389 3 0.19900335894881918 0.0004893964110929853 0.0009770802556418367 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 139349 21217 YLLPAIVHI True PC9_epitope_Rep2 1037.62735252977 1037.62677496793 87.069 1 0.19900243445803187 0.0004893964110929853 0.0009771010602151033 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 40818 7714 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.4134299358602 34.624 2 0.1989969040021217 0.0004893964110929853 0.0009772255258714716 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 42268 18941 IDTIEIITDR True PC9_epitope_Rep3 1187.63976768827 1187.6386699358602 78.082 2 0.19899583370514787 0.0004893964110929853 0.0009772496152725418 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94895 10830 RTDYGQVFTY True H1975_Epitope_Rep1 1248.5775017848798 1248.57640993586 46.619 2 0.19897621756687076 0.0004893964110929853 0.0009776912253496148 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 131150 5804 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.52347496793 27.314 1 0.1989679821712404 0.0004893964110929853 0.0009778766850756066 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 78267 19964 NYIEFTRIL True PC9_epitope_Rep4 1167.62880908175 1167.6277099358601 84.925 2 0.198965648406736 0.0004893964110929853 0.0009779292474753796 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 49845 10826 KIAPNTPQL True PC9_epitope_Rep5 980.5654805492 980.56438993586 46.63 2 0.19896479496841865 0.0004893964110929853 0.0009779484698164095 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 2855 6004 AEVEPTPEA True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 28.073 1 0.1989528093282896 0.0004893964110929853 0.0009782184673329038 ['ENSG00000186834|ENST00000332499|HEXIM1'] 118633 17881 TYSPALNKMF True PC9_epitope_Rep2 1170.5743309807401 1170.5732299358601 74.081 2 0.19894589500514084 0.0004893964110929853 0.0009783742585606733 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 78219 22561 NYGDYFNVF True PC9_epitope_Rep2 1137.47672511445 1137.47562993586 92.273 2 0.19894391521126686 0.0004893964110929853 0.000978418871199349 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 71426 18467 LYTEKFEEF True PC9_epitope_Rep1 1204.5652057656796 1204.5641099358602 75.825 2 0.19894255238398698 0.0004893964110929853 0.000978449582309661 ['ENSG00000084652|ENST00000373610|TXLNA'] 45434 10811 IQHSEFEEV True PC9_epitope_Rep1 1116.50875351872 1116.5076499358602 46.472 2 0.19893637208293916 0.0004893964110929853 0.0009785888666086913 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1'] 108148 13812 SYFPEITHI True NCI_RA007_Epitope_Rep5 1105.54441075145 1105.5433099358602 59.803 2 0.19892925552909627 0.0004893964110929853 0.0009787492756939203 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 40991 17597 HTDWLLDLY True H1975_Epitope_Rep3 1174.56587447202 1174.56476993586 73.51 2 0.19892300303671728 0.0004893964110929853 0.0009788902303563367 ['ENSG00000133302|ENST00000265140|SLF1'] 111351 8654 THQDVHLGETL True PC9_epitope_Rep2 1248.6098645423199 1248.60820490379 38.654 3 0.19892182743227138 0.0004893964110929853 0.000978916735169655 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 6774 19701 AQDFRVLYV True PC9_epitope_Rep5 1109.58694426977 1109.58584993586 80.829 2 0.19891964595968498 0.0004893964110929853 0.0009789659198810104 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 92859 10428 RPFEDQTSL True PC9_epitope_Rep4 1091.52473793603 1091.52364993586 47.821 2 0.19891953453366512 0.0004893964110929853 0.0009789684322214262 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 54617 7887 KYLDNPNAL True NCI_RA007_Epitope_Rep5 1046.53965972418 1046.53856993586 37.031 2 0.19891814983522327 0.0004893964110929853 0.0009789996537796664 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 35674 7401 GTEFGGSIYQK True NCI_RA007_Epitope_Rep3 1185.56660274801 1185.56550993586 36.238 2 0.19891373291569292 0.0004893964110929853 0.0009790992511693412 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 46446 10762 ISTEVNPKL True PC9_epitope_Rep1 999.56006081559 999.55896993586 46.283 2 0.19891309798891962 0.0004893964110929853 0.0009791135690074306 ['ENSG00000007545|ENST00000397412|CRAMP1'] 71497 22315 LYYDAIWHF True PC9_epitope_Rep1 1226.5760452328998 1226.57494993586 90.646 2 0.19891185073970946 0.0004893964110929853 0.0009791416955586675 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 67949 11295 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.58167496793 48.493 1 0.19891120813300753 0.0004893964110929853 0.00097915618721331 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 8060 11507 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 49.319 2 0.1989110242215973 0.0004893964110929853 0.0009791603347051943 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 73063 13365 MRDPTFVRL True PC9_epitope_Rep2 1133.60154878809 1133.59990490379 56.684 3 0.19889610380894418 0.0004893964110929853 0.0009794968722039454 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 8594 4431 ATWATKELRK True NCI_RA007_Epitope_Rep4 1202.6771562564998 1202.67550490379 23.407 3 0.19889581872257522 0.0004893964110929853 0.000979503303601283 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 77641 9064 NTFSVVPSPK True NCI_RA007_Epitope_Rep2 1074.5709598524597 1074.5698699358602 39.859 2 0.19889579950169908 0.0004893964110929853 0.0009795037372155818 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 22439 6437 ETERLTDDY True H1975_Epitope_Rep2 1140.4934973773998 1140.49240993586 29.68 2 0.1988865623586479 0.0004893964110929853 0.000979712145275405 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF'] 15052 9715 DYQALRTSI True NCI_RA007_Epitope_Rep3 1065.54547338061 1065.54436993586 45.286 2 0.1988615844284534 0.0004893964110929853 0.000980275919088557 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 108574 21261 SYNPLWLRI True PC9_epitope_Rep3 1160.6342288153598 1160.63312993586 87.074 2 0.1988598441637976 0.0004893964110929853 0.0009803152105109217 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 36649 19902 GVIEKLLTS True PC9_epitope_Rep5 958.5698972233 958.56880993586 81.607 2 0.19885524258827708 0.0004893964110929853 0.0009804191117705017 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 21287 12971 ERDYTYEEL True PC9_epitope_Rep2 1216.5247975056798 1216.52370993586 55.185 2 0.198853015300742 0.0004893964110929853 0.0009804694067684788 ['ENSG00000125977|ENST00000374980|EIF2S2'] 85203 8993 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 39.497 2 0.19885045386592531 0.0004893964110929853 0.000980527250437811 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 80050 15455 PFHTSTEMF True PC9_epitope_Rep1 1095.46953155903 1095.46842993586 64.269 2 0.19883819446989104 0.0004893964110929853 0.0009808041459625095 ['ENSG00000162496|ENST00000616661|DHRS3', 'DHRS3|p.Q228H|1|0.07|ENSG00000162496|chr1:12578732-12578732|C/G|missense_variant'] 139069 10381 YLDDPDLKY True H1975_Epitope_Rep3 1140.5339056374 1140.53280993586 44.987 2 0.1988345938435071 0.0004893964110929853 0.0009808854860182611 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 141274 9772 YTDKVVIGM True H1975_Epitope_Rep2 1024.52631815916 1024.5252299358601 42.574 2 0.19883073275933058 0.0004893964110929853 0.0009809727174700338 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 93401 6842 RQAVPLFSK True NCI_RA007_Epitope_Rep4 1044.60801406752 1044.6069099358601 32.938 2 0.1988270581233436 0.0004893964110929853 0.0009810557438207864 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 54638 9678 KYLGQLHYL True NCI_RA007_Epitope_Rep4 1133.62332977849 1133.62222993586 44.075 2 0.1988240885880533 0.0004893964110929853 0.000981122843962997 ['ENSG00000076201|ENST00000265562|PTPN23'] 74518 21606 NFIVWLEDQK True PC9_epitope_Rep1 1290.66083748602 1290.6597499358602 87.931 2 0.1988164856180533 0.0004893964110929853 0.0009812946629892912 ['ENSG00000087302|ENST00000261700|RTRAF'] 45947 7717 ISENKFLKY True H1975_Epitope_Rep2 1140.6179100448799 1140.61627490379 34.635 3 0.19881492918295987 0.0004893964110929853 0.0009813298404858844 ['nc|ENSG00000107951|Q9NVV4-2|MTPAP', 'ENST00000488290.5_1_10:30602540-30654262:-|nuORF', 'MTPAP|p.G449Wfs*7|1|0.38|ENSG00000107951|chr10:30316004-30316005|-/A|frameshift_variant', 'ENSG00000107951|ENST00000263063|MTPAP'] 95565 18618 RWSPVRPLVF True PC9_epitope_Rep4 1255.71896149883 1255.71786993586 79.691 2 0.1988048784858042 0.0004893964110929853 0.0009815570300189854 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 109883 4538 TEEYPNKPP True H1975_Epitope_Rep3 1073.5029398622898 1073.50184993586 22.575 2 0.1988027747014892 0.0004893964110929853 0.0009816045913833766 ['ENSG00000077721|ENST00000371558|UBE2A'] 91949 5021 RKNQGDFSL True NCI_RA007_Epitope_Rep3 1063.5410567065098 1063.53994993586 26.745 2 0.19878504130114139 0.0004893964110929853 0.0009820055916000328 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF', 'ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 2422 11029 AEQFRLEQI True H1975_Epitope_Rep1 1132.5876725457597 1132.58656993586 47.384 2 0.19878343841245424 0.0004893964110929853 0.0009820418453496196 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 24036 19986 EYNNIFHTF True PC9_epitope_Rep5 1183.52982331647 1183.5287299358602 81.93 2 0.19878179430886697 0.0004893964110929853 0.0009820790326823135 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 15924 6829 EDLQELNDR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.5192899358601 31.179 2 0.1987728845827787 0.0004893964110929853 0.0009822805828383068 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'ENST00000470199.2_1_1:156084502-156100509:+|nuORF'] 9709 15316 AYGKDFHLI True PC9_epitope_Rep3 1062.5498304850598 1062.5487299358601 64.064 2 0.19877102285462345 0.0004893964110929853 0.0009823227029075337 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'MIER1|p.K332Nfs*25|1|0.17|ENSG00000198160|chr1:66976643-66976643|A/-|frameshift_variant', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 64873 18572 LQDVPLSSV True PC9_epitope_Rep5 956.51786165044 956.51676993586 76.461 2 0.19876536877903078 0.0004893964110929853 0.000982450632823922 ['ENST00000524576.5_1_11:66203480-66233392:-|nuORF', 'nc|ENSG00000174547|Q9Y3B7-2|MRPL11', 'nc|ENSG00000174547|Q9Y3B7-3|MRPL11', 'ENSG00000174547|ENST00000310999|MRPL11'] 42465 10171 IEEDIRDLAA True H1975_Epitope_Rep3 1143.57716743171 1143.57606993586 44.167 2 0.19875913826146327 0.0004893964110929853 0.0009825916247481975 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 117080 6608 TVIQSTQGMYK True NCI_RA007_Epitope_Rep3 1254.62782310558 1254.62672993586 33.052 2 0.19875556885561294 0.0004893964110929853 0.0009826724068587541 ['ENSG00000165434|ENST00000298198|PGM2L1'] 86335 21263 QIYDIFQKL True PC9_epitope_Rep3 1166.6335601090198 1166.6324699358602 87.081 2 0.19875104296750343 0.0004893964110929853 0.0009827748454694129 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 70972 17068 LYGRNFNYL True PC9_epitope_Rep2 1158.5821932425 1158.58108993586 70.904 2 0.19874879622715774 0.0004893964110929853 0.0009828257019987728 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 35949 4818 GTTHNFLYK True NCI_RA007_Epitope_Rep3 1079.5399940773498 1079.5388899358602 25.92 2 0.19874521085354166 0.0004893964110929853 0.0009829068648890581 ['ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C', 'ENST00000599239.5_1_19:48565437-48599986:-|nuORF'] 78189 13645 NYDKVEKLF True PC9_epitope_Rep2 1154.5971746003 1154.59552490379 57.777 3 0.19873430489875005 0.0004893964110929853 0.0009831537867046858 ['ENSG00000176102|ENST00000323959|CSTF3'] 36638 21896 GVIDLIFEKA True PC9_epitope_Rep5 1103.62266107215 1103.6215699358602 89.26 2 0.19873181619875097 0.0004893964110929853 0.00098321014209946 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 34974 15830 GQSELASRLTL True PC9_epitope_Rep2 1173.6353510141698 1173.63424993586 66.149 2 0.19872922621564357 0.0004893964110929853 0.0009832687944406886 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 118177 18503 TYISWKEEL True PC9_epitope_Rep2 1167.58119018299 1167.58008993586 76.508 2 0.19872104731298978 0.0004893964110929853 0.0009834540355923972 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 56279 8138 LDADPSLQR True PC9_epitope_Rep1 1013.51417325233 1013.51306993586 36.133 2 0.19871478976778395 0.0004893964110929853 0.0009835957842109925 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 138196 14897 YGQISEVVVVK True PC9_epitope_Rep5 1219.68123857743 1219.68014993586 62.304 2 0.19871325949283428 0.0004893964110929853 0.0009836304517783592 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 78272 18848 NYIEKVVAI True PC9_epitope_Rep1 1047.59644632431 1047.5953499358602 77.284 2 0.19871150538521343 0.0004893964110929853 0.0009836701916634942 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 54905 8350 KYPNVFKKI True PC9_epitope_Rep4 1135.67536535135 1135.67371490379 39.576 3 0.19870736199310715 0.0004893964110929853 0.0009837640679681379 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 24876 17723 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.49657496793 73.188 1 0.19869704829779397 0.0004893964110929853 0.0009839977830612004 ['ENSG00000204592|ENST00000376630|HLA-E'] 64833 9637 LQDFFNGR True H1975_Epitope_Rep3 995.4824792012299 995.48138993586 42.086 2 0.19869219164085497 0.0004893964110929853 0.0009841078573722783 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 95126 7115 RVFDVPIRR True NCI_RA007_Epitope_Rep4 1156.68291034328 1156.68127490379 33.989 3 0.19868862088492145 0.0004893964110929853 0.0009841887950954537 ['ENSG00000110429|ENST00000265651|FBXO3'] 137572 6094 YEENSHLTSV True H1975_Epitope_Rep1 1177.52513185885 1177.5240299358602 28.509 2 0.19866916105808985 0.0004893964110929853 0.0009846300050499232 ['ENSG00000157557|ENST00000360938|ETS2'] 16395 20276 EEIVQFFQGL True H1975_Epitope_Rep3 1208.6077392839998 1208.60664993586 84.792 2 0.19866618064976477 0.0004893964110929853 0.0009846975969484695 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3'] 96245 13857 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.6020249037902 58.585 3 0.19866371410541372 0.0004893964110929853 0.0009847535385796634 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 104233 15913 SQHGVIIQL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 66.201 2 0.1986635386626477 0.0004893964110929853 0.000984757517771835 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 6942 14820 AQIKPFYTV True PC9_epitope_Rep4 1065.5858816406098 1065.58478993586 64.942 2 0.19866096669893735 0.0004893964110929853 0.0009848158539621857 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 17599 12708 EHINEGETAML True PC9_epitope_Rep1 1242.55505208814 1242.5539499358601 53.753 2 0.1986439918802431 0.0004893964110929853 0.0009852009565281595 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 64164 13774 LPFPIIDDR True H1975_Epitope_Rep3 1084.59169529704 1084.5905899358602 58.284 2 0.19864110583551428 0.0004893964110929853 0.0009852664463691667 ['ENSG00000117592|ENST00000340385|PRDX6', 'PRDX6|p.G138Vfs*6|1|0.08|ENSG00000117592|chr1:173486267-173486267|G/-|frameshift_variant'] 142342 9463 YYEEQHPEL True PC9_epitope_Rep6 1206.5193182024198 1206.51822993586 46.638 2 0.1986344170741583 0.0004893964110929853 0.0009854182438635468 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 115199 15420 TRDQFLDTL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 71.469 2 0.19863103878710883 0.0004893964110929853 0.000985494921009877 ['ENSG00000010292|ENST00000315579|NCAPD2'] 117299 20678 TVMKDILQAV True PC9_epitope_Rep1 1116.6212811731598 1116.62018993586 84.362 2 0.19862288497056024 0.0004893964110929853 0.0009856800132321208 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 3876 14894 AGYTDNLVRV True PC9_epitope_Rep5 1106.57202248162 1106.57092993586 62.293 2 0.19861716190807824 0.0004893964110929853 0.0009858099479838156 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 141309 5277 YTDSEPRATY True H1975_Epitope_Rep3 1201.52513185885 1201.5240299358602 25.38 2 0.19860131654267693 0.0004893964110929853 0.0009861697861889664 ['ENSG00000158480|ENST00000289431|SPATA2'] 115789 16651 TSDEVNFLVY True H1975_Epitope_Rep2 1185.55536935797 1185.55426993586 69.278 2 0.19859859318433584 0.0004893964110929853 0.000986231645194401 ['ENSG00000092377|ENST00000383032|TBL1Y', 'nc|ENSG00000101849|O60907-2|TBL1X', 'ENSG00000101849|ENST00000645353|TBL1X'] 4243 11548 AIDQLHLEY True H1975_Epitope_Rep1 1100.5502244078798 1100.54912993586 49.405 2 0.19858355865917038 0.0004893964110929853 0.0009865732129983595 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 24065 10294 EYNSDLHQF True PC9_epitope_Rep6 1151.4883524273098 1151.48724993586 50.283 2 0.19858169397817269 0.0004893964110929853 0.0009866155847592791 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 142554 13471 YYLNDLERI True NCI_RA007_Epitope_Rep5 1197.6029882567298 1197.60188993586 58.501 2 0.19858122738451456 0.0004893964110929853 0.000986626187606223 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 48873 9265 KEAIETIVAA True H1975_Epitope_Rep2 1043.5862755634298 1043.5851699358602 40.593 2 0.19857469794366053 0.0004893964110929853 0.0009867745742261928 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 101355 19375 SLITLIEKV True PC9_epitope_Rep6 1014.6324974798599 1014.63140993586 87.176 2 0.19856868612232034 0.0004893964110929853 0.000986911217329665 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'CPD|p.R370H|1|0.26|ENSG00000108582|chr17:30420955-30420955|G/A|missense_variant'] 70841 15422 LYDIILKNF True NCI_RA007_Epitope_Rep3 1137.64339651673 1137.6422899358602 68.216 2 0.19855888210117678 0.0004893964110929853 0.00098713409431086 ['ENSG00000092010|ENST00000206451|PSME1'] 96021 19945 RYLPKGFLNQF True PC9_epitope_Rep3 1381.7506555499297 1381.7495499358602 81.962 2 0.19855141162881268 0.0004893964110929853 0.0009873039560952524 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 23738 12703 EYGFQNALIVR True H1975_Epitope_Rep1 1308.68263555976 1308.68152993586 53.919 2 0.19853531979513134 0.0004893964110929853 0.000987669947877508 ['CON__P02769'] 115641 7800 TRVSQINTL True PC9_epitope_Rep6 1030.5771078620598 1030.5760099358602 39.39 2 0.19852474128769668 0.0004893964110929853 0.000987910618987047 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 133753 17990 VYEEILHQI True PC9_epitope_Rep4 1142.5971746003 1142.5960699358602 77.254 2 0.19850147046506242 0.0004893964110929853 0.0009884402593550684 ['ENSG00000135842|ENST00000367511|NIBAN1'] 43711 11650 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 49.69 2 0.19847325151890072 0.0004893964110929853 0.000989082900292048 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 98888 6202 SGVSLAALKK True NCI_RA007_Epitope_Rep4 972.59678067748 972.59568993586 30.466 2 0.19845392574086543 0.0004893964110929853 0.0009895232554057226 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 41455 13620 HYKPTPLYF True PC9_epitope_Rep2 1164.59678067748 1164.59568993586 57.681 2 0.19845220679990455 0.0004893964110929853 0.000989562432531015 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 45487 16407 IQLVEEELDR True PC9_epitope_Rep3 1242.6455813446998 1242.64448993586 68.247 2 0.19844985539561397 0.0004893964110929853 0.0009896160269203052 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 89437 20721 QYEEQFVTL True PC9_epitope_Rep3 1155.5448046742697 1155.54370993586 84.978 2 0.1984314005020008 0.0004893964110929853 0.0009900367612264889 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 38293 8274 HEFGRLLST True NCI_RA007_Epitope_Rep4 1058.55089311422 1058.5497899358602 38.635 2 0.19842488070299974 0.0004893964110929853 0.0009901854423542279 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'ENST00000478436.1_1_3:145794517-145794673:-|nuORF', 'nc|ENSG00000152952|O00469-3|PLOD2'] 2910 10756 AEYDRPNLLP True H1975_Epitope_Rep3 1186.59823722946 1186.5971499358602 46.451 2 0.19842317149381916 0.0004893964110929853 0.0009902244238167717 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 26804 20734 FLAEDALNTV True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 85.191 2 0.19842102150745972 0.0004893964110929853 0.0009902734601483717 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 90141 6471 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 29.807 2 0.1984184465734158 0.0004893964110929853 0.0009903321917813588 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 107579 13820 SVPIDLQKV True PC9_epitope_Rep4 997.58079626017 997.57968993586 61.055 2 0.19841692939863542 0.0004893964110929853 0.0009903667986342051 ['ENSG00000198056|ENST00000338193|PRIM1'] 33400 15074 GLADNTVIAKV True PC9_epitope_Rep2 1099.62372370131 1099.62262993586 63.24 2 0.1984153408061368 0.0004893964110929853 0.0009904030358294652 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 97323 9449 SEAPKSWMV True H1975_Epitope_Rep3 1033.49026700361 1033.4891699358602 41.349 2 0.19841221688412655 0.0004893964110929853 0.0009904742991226432 ['ENSG00000154760|ENST00000285013|SLFN13'] 22345 5275 ETDRGMSAEY True H1975_Epitope_Rep2 1157.46590273057 1157.46480993586 25.356 2 0.1984117994916943 0.0004893964110929853 0.0009904838211195737 ['ENSG00000100347|ENST00000350028|SAMM50'] 115584 8496 TRSTFSTNY True PC9_epitope_Rep5 1075.49343780775 1075.4923499358601 37.622 2 0.19840911617403376 0.0004893964110929853 0.0009905450379877523 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 40746 6633 HRTELETKL True PC9_epitope_Rep5 1125.61422164677 1125.61258490379 30.487 3 0.19840589381722987 0.0004893964110929853 0.0009906185574405963 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 21437 14941 ERISLQQEL True PC9_epitope_Rep1 1114.59823722946 1114.5971499358602 62.293 2 0.19839157447657604 0.0004893964110929853 0.0009909453255340136 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 119416 14208 VAQLEQVYIR True PC9_epitope_Rep2 1217.6768219033297 1217.67572993586 59.918 2 0.1983834353885699 0.0004893964110929853 0.000991131108122228 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 114698 15290 TQIDHYVGI True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 63.634 2 0.1983808297526092 0.0004893964110929853 0.0009911905916742977 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 53794 13413 KTDDLTMVLY True H1975_Epitope_Rep2 1197.59512599497 1197.5940299358601 56.728 2 0.19837917817356357 0.0004893964110929853 0.0009912282971020357 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 39122 12340 HHYEGAVVIL True PC9_epitope_Rep4 1136.5978433066398 1136.59674993586 55.274 2 0.19837729248032462 0.0004893964110929853 0.000991271349098231 ['ENSG00000163655|ENST00000496455|GMPS'] 95243 12066 RVLQALEGLK True PC9_epitope_Rep4 1125.6869926642098 1125.6858899358601 54.219 2 0.19837579786989581 0.0004893964110929853 0.0009913054736701388 ['ENSG00000105372|ENST00000598742|RPS19'] 68301 7508 LTEIKGSVY True H1975_Epitope_Rep2 1008.54916177872 1008.54806993586 33.829 2 0.19836522007457982 0.0004893964110929853 0.000991547016924951 ['ENSG00000153975|ENST00000368576|ZUP1', 'ENST00000471919.1_1_6:116981518-116989864:-|nuORF'] 48146 18324 IYPHGLVLL True PC9_epitope_Rep6 1023.61170246563 1023.61060993586 83.126 2 0.19835169544715406 0.0004893964110929853 0.0009918559368738476 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 76508 16855 NQIKEFIYA True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 69.987 2 0.1983506231058814 0.0004893964110929853 0.000991880434662123 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 52381 7781 KKLLEATEL True NCI_RA007_Epitope_Rep4 1043.62266107215 1043.6215699358602 36.61 2 0.19834082517123633 0.0004893964110929853 0.0009921042979694073 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 88917 20530 QVFPGLLERV True PC9_epitope_Rep1 1156.6604435631998 1156.65934993586 83.781 2 0.198337463332339 0.0004893964110929853 0.0009921811209722354 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 29034 8839 FTEQYNEQY True H1975_Epitope_Rep1 1220.4985827578398 1220.49807496793 38.923 1 0.19833259322119123 0.0004893964110929853 0.0009922924208128335 ['ENSG00000173914|ENST00000310046|RBM4B'] 112438 8713 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.5120699358602 38.516 2 0.1983301678069212 0.0004893964110929853 0.0009923478550645068 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 90585 8346 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 37.087 2 0.19831922246497913 0.0004893964110929853 0.000992598055844001 ['ENSG00000026025|ENST00000544301|VIM'] 86937 18136 QLVDIIEKV True PC9_epitope_Rep6 1055.62266107215 1055.6215699358602 82.397 2 0.19830606845479823 0.0004893964110929853 0.000992898828514603 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 106751 19939 STYKFFEVI True PC9_epitope_Rep4 1132.580461907 1132.57936993586 84.831 2 0.19830409676687305 0.0004893964110929853 0.0009929439199684682 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 38965 18990 HHIYLEGTLL True PC9_epitope_Rep1 1194.6397081186199 1194.63805490379 77.831 3 0.19830394121193512 0.0004893964110929853 0.0009929474775145389 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 15836 9192 EDENFILK True H1975_Epitope_Rep1 1006.4971262058599 1006.49602993586 40.265 2 0.19829506379640557 0.0004893964110929853 0.0009931505254538713 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 54525 18214 KYIENLDNITF True PC9_epitope_Rep6 1368.6925315371197 1368.69142993586 82.703 2 0.19829302929747222 0.0004893964110929853 0.0009931970652239744 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 29524 16407 FVHDLVLYL True H1975_Epitope_Rep3 1117.6171817688898 1117.6160899358601 68.584 2 0.1982886824222843 0.0004893964110929853 0.0009932965086193474 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 78569 7185 NYQNVVHKL True PC9_epitope_Rep2 1113.59309227937 1113.59198993586 33.027 2 0.19828164385811484 0.0004893964110929853 0.0009934575509153434 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ZMYM4|p.A664Ffs*28|1|0.06|ENSG00000146463|chr1:35387155-35387156|-/TTTCCTAGACAATATTGTTTAGT|frameshift_variant'] 141028 17545 YSLDHISSL True PC9_epitope_Rep5 1033.5080252427301 1033.5069299358602 72.494 2 0.19827339707979721 0.0004893964110929853 0.000993646270453738 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 100259 8292 SIYGEKFEDEN True NCI_RA007_Epitope_Rep2 1329.57247597409 1329.57136993586 36.893 2 0.19826701142109687 0.0004893964110929853 0.0009937924247676545 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 5818 10310 APELLYYANK True H1975_Epitope_Rep1 1180.61282466444 1180.61172993586 44.603 2 0.198264172717904 0.0004893964110929853 0.0009938574036426307 ['CON__P02769'] 24491 7532 FAEHNDLQY True H1975_Epitope_Rep3 1135.4934378077498 1135.4923499358601 33.954 2 0.19824813098408112 0.0004893964110929853 0.000994224684427082 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 121642 13174 VFIDKQTNL True PC9_epitope_Rep3 1076.5866099166 1076.58550993586 55.705 2 0.19824525316161806 0.0004893964110929853 0.0009942905875190585 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 103401 6103 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 30.09 2 0.19823924219198538 0.0004893964110929853 0.0009944282548555077 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 44327 14602 ILDNADVLSQY True H1975_Epitope_Rep2 1249.61903224369 1249.61792993586 61.325 2 0.19822057468779788 0.0004893964110929853 0.0009948559126725727 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 29532 21424 FVHDLVLYL True PC9_epitope_Rep2 1117.6171817688898 1117.6160899358601 87.88 2 0.19821533904090488 0.0004893964110929853 0.0009949758903340814 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 85764 8788 QHDPETSVL True PC9_epitope_Rep1 1024.48253877088 1024.4814499358602 38.644 2 0.19821418660259052 0.0004893964110929853 0.0009950023010256066 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 17892 14281 EHYYNAISV True PC9_epitope_Rep1 1094.50327421546 1094.5021699358601 59.757 2 0.1982092455700596 0.0004893964110929853 0.0009951155437633585 ['ENSG00000198730|ENST00000361367|CTR9'] 96278 7477 RYQTQPVTL True NCI_RA007_Epitope_Rep5 1104.5927579261997 1104.5916699358602 35.441 2 0.19820134199040307 0.0004893964110929853 0.0009952967115198488 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 98880 8241 SGVSLAALK True NCI_RA007_Epitope_Rep5 844.50181766348 844.50072993586 38.378 2 0.1981979616611315 0.0004893964110929853 0.0009953742063397557 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 53676 7306 KSDVEAIFSK True NCI_RA007_Epitope_Rep3 1122.5920892198599 1122.59044490379 35.849 3 0.19819687640389017 0.0004893964110929853 0.0009953990873928084 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 76169 8026 NNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 975.50591744819 975.50480993586 35.215 2 0.19819010536510243 0.0004893964110929853 0.0009955543370934543 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 141861 15407 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.54357496793 64.534 1 0.19818509968580222 0.0004893964110929853 0.0009956691253764276 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 118486 15831 TYPYLQHEI True PC9_epitope_Rep1 1162.5658744720201 1162.56476993586 65.71 2 0.1981830068827852 0.0004893964110929853 0.0009957171206524415 ['nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 15035 12665 DYMKTTSNF True PC9_epitope_Rep1 1105.47501086229 1105.47390993586 53.587 2 0.1981803797258968 0.0004893964110929853 0.00099577737381171 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 78300 17677 NYIPRFWTF True NCI_RA007_Epitope_Rep2 1242.6185787512197 1242.61748993586 73.5 2 0.1981783911171234 0.0004893964110929853 0.0009958229844675196 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 4012 14474 AHESAVTGLSL True PC9_epitope_Rep5 1083.55603806431 1083.5549499358601 60.674 2 0.19817263408993832 0.0004893964110929853 0.0009959550392382684 ['ENSG00000110107|ENST00000227524|PRPF19'] 43206 13851 IFIKDSNSL True PC9_epitope_Rep1 1035.56006081559 1035.5589699358602 58.119 2 0.19817245158366686 0.0004893964110929853 0.0009959592258568669 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 118955 12858 VADTVARVL True PC9_epitope_Rep3 942.5498304850598 942.54872993586 54.476 2 0.19817116432063553 0.0004893964110929853 0.000995988755641163 ['ENSG00000145632|ENST00000274289|PLK2'] 34011 7446 GLTSVINQK True NCI_RA007_Epitope_Rep2 958.5447451046199 958.54364993586 33.589 2 0.19816128565010344 0.0004893964110929853 0.0009962154013414093 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 77491 6501 NTDDTIGDLK True H1975_Epitope_Rep2 1090.51423282198 1090.5131299358602 29.922 2 0.19815228648966862 0.0004893964110929853 0.000996421913517028 ['ENSG00000198258|ENST00000586895|UBL5', 'ENST00000589372.1_1_19:9939013-9939570:+|nuORF'] 105441 9442 SRTSIQSEL True PC9_epitope_Rep3 1019.52473793603 1019.52364993586 41.258 2 0.19815106410164274 0.0004893964110929853 0.0009964499681132059 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 115396 15134 TRLEFQQQL True PC9_epitope_Rep3 1161.61422164677 1161.6131299358601 63.352 2 0.19814623389361133 0.0004893964110929853 0.000996560832262397 ['ENSG00000171159|ENST00000372994|BBLN'] 95851 18446 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.6263299358602 75.743 2 0.19814428824507285 0.0004893964110929853 0.000996605492771566 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 75894 10581 NLQTDLSDGLR True H1975_Epitope_Rep3 1230.62042922602 1230.6193299358602 45.77 2 0.1981379759865127 0.0004893964110929853 0.0009967503984742226 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 107035 5164 SVFQTTDTK True NCI_RA007_Epitope_Rep4 1025.5029398622898 1025.50184993586 26.388 2 0.1981267860440137 0.0004893964110929853 0.0009970073293741532 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 8124 8738 ATEESDLAQQY True H1975_Epitope_Rep2 1253.54117584581 1253.5400699358602 38.572 2 0.19810771194986232 0.0004893964110929853 0.0009974454404189717 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 9163 4345 AVLEKQDISDK True NCI_RA007_Epitope_Rep4 1244.66123140884 1244.65957490379 23.06 3 0.1981034027578003 0.0004893964110929853 0.0009975444445715056 ['ENSG00000135932|ENST00000258418|CAB39'] 109130 11863 TALVELLK True H1975_Epitope_Rep3 885.5535188831699 885.55242993586 50.78 2 0.1981005352758653 0.0004893964110929853 0.0009976103307389654 ['CON__P02769'] 42671 11621 IEIDNGDELTA True H1975_Epitope_Rep2 1188.55101225352 1188.5499099358601 49.767 2 0.19809634786833138 0.0004893964110929853 0.000997706552692621 ['nc|ENSG00000151239|Q12792-4|TWF1', 'ENSG00000151239|ENST00000395510|TWF1', 'nc|ENSG00000151239|Q12792-3|TWF1'] 133867 15627 VYGPMKNYL True PC9_epitope_Rep2 1083.5423025764699 1083.54120993586 65.386 2 0.1980921787585117 0.0004893964110929853 0.0009978023634314248 ['ENSG00000166825|ENST00000300060|ANPEP'] 118703 18639 TYTDVTPRQFF True PC9_epitope_Rep4 1373.6615657620098 1373.6604699358602 79.772 2 0.19809198799984143 0.0004893964110929853 0.00099780674749666 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 95764 12875 RYIANTVEL True PC9_epitope_Rep4 1077.58185888933 1077.5807699358602 57.397 2 0.1980812197054849 0.0004893964110929853 0.0009980542585556415 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 114672 13539 TQFELTGHSV True PC9_epitope_Rep5 1117.54038800017 1117.53928993586 57.1 2 0.19808108082042764 0.0004893964110929853 0.0009980574512542103 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 134319 16211 VYNSEYYHF True PC9_epitope_Rep5 1220.5138388991602 1220.51274993586 67.348 2 0.1980675583260311 0.0004893964110929853 0.0009983683562699332 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 142589 19026 YYLTDVDRI True PC9_epitope_Rep3 1156.5764391557198 1156.57534993586 78.405 2 0.19806376300883582 0.0004893964110929853 0.0009984556344848955 ['ENSG00000088256|ENST00000078429|GNA11'] 28667 11169 FSNPRALYL True H1975_Epitope_Rep2 1079.5763795860698 1079.5752899358602 47.998 2 0.19804866528613213 0.0004893964110929853 0.0009988029018608126 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 74501 14214 NFGIGQDIQPK True PC9_epitope_Rep1 1215.62478633047 1215.62368993586 59.497 2 0.19803575825648262 0.0004893964110929853 0.0009990998764642031 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 54322 18397 KYDEIFYNL True PC9_epitope_Rep6 1203.5811901829898 1203.58008993586 83.41 2 0.19802848694361005 0.0004893964110929853 0.0009992672192684956 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 56631 13285 LDIDSPPITAR True PC9_epitope_Rep6 1196.6401020414398 1196.63900993586 62.753 2 0.19801833277088124 0.0004893964110929853 0.0009995009555650673 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 26873 7835 FLDESRSTQY True H1975_Epitope_Rep3 1244.567331024 1244.56622993586 35.114 2 0.19799869099589368 0.0004893964110929853 0.0009999532401576989 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 99436 18467 SIAGIFKEV True PC9_epitope_Rep4 962.54368247546 962.54258993586 79.103 2 0.19799059255621718 0.0004893964110929853 0.001000139779974937 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 78246 12531 NYGRVFSEW True NCI_RA007_Epitope_Rep5 1156.53015766964 1156.5290699358602 54.854 2 0.19798996611954459 0.0004893964110929853 0.0010001542107989424 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 29167 12467 FTQGHIVEV True PC9_epitope_Rep3 1028.52909504048 1028.5279899358602 52.978 2 0.19798202287867733 0.0004893964110929853 0.0010003372123083055 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 9287 9713 AVQEFGLARFK True NCI_RA007_Epitope_Rep4 1264.6928063206399 1264.69117490379 44.207 3 0.19798159163901238 0.0004893964110929853 0.0010003471484469496 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 78143 14527 NYAFLHRTL True PC9_epitope_Rep1 1133.59817765981 1133.59654490379 60.703 3 0.19797835986047876 0.0004893964110929853 0.0010004216145981027 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 78152 17932 NYAQVFNKL True PC9_epitope_Rep3 1095.57129420563 1095.57018993586 74.179 2 0.19797297907694397 0.0004893964110929853 0.0010005456101297061 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 85251 9040 QEQFNSIAA True H1975_Epitope_Rep3 1006.4719740871798 1006.47086993586 39.76 2 0.19797245516657216 0.0004893964110929853 0.001000557684017236 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 22284 13737 ETDEKDFYLYY True H1975_Epitope_Rep3 1484.6347418774799 1484.6336499358601 58.137 2 0.1979712126180836 0.0004893964110929853 0.0010005863200160151 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 90714 7381 REQQLAEIEA True H1975_Epitope_Rep3 1185.5989655054498 1185.5978699358602 33.37 2 0.19797020937526358 0.0004893964110929853 0.0010006094415324614 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 35961 5400 GTVDPQELQK True NCI_RA007_Epitope_Rep4 1113.56660274801 1113.56550993586 27.341 2 0.19796834016237005 0.0004893964110929853 0.0010006525222997329 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 43720 11884 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 50.728 2 0.19796376747385702 0.0004893964110929853 0.0010007579193826342 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 130210 5536 VSESHGQLSY True H1975_Epitope_Rep2 1105.50400249145 1105.50290993586 26.302 2 0.1979604267251277 0.0004893964110929853 0.0010008349282038392 ['OTUD4|p.T948Nfs*31|1|0.15|ENSG00000164164|chr4:145137932-145137933|-/T|frameshift_variant', 'nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000237841.5_1_12:3950645-3951302:+|nuORF'] 45382 3202 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 16.349 2 0.1979489583017591 0.0004893964110929853 0.0010010993362459498 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 27911 21345 FQEEDFPAL True PC9_epitope_Rep1 1094.4920408254197 1094.49094993586 86.934 2 0.19794823725500438 0.0004893964110929853 0.001001115962541926 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 142654 20497 YYPEHFTLL True PC9_epitope_Rep1 1181.57571087973 1181.57460993586 83.654 2 0.19794482903420857 0.0004893964110929853 0.0010011945549352433 ['ENSG00000100065|ENST00000251973|CARD10'] 24576 7690 FAHTNVESL True NCI_RA007_Epitope_Rep4 1016.4927095317599 1016.49160993586 36.242 2 0.19794174004491338 0.0004893964110929853 0.0010012657913056717 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 131114 12125 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.52277496793 51.806 1 0.197939442523198 0.0004893964110929853 0.0010013187786339745 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 30188 15929 FYQPKIQQF True PC9_epitope_Rep4 1197.61824439805 1197.6171499358602 69.198 2 0.1979375224723747 0.0004893964110929853 0.001001363062576262 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 88530 19514 QTAPEEAFIKL True PC9_epitope_Rep1 1245.6605031328497 1245.6594099358601 79.88 2 0.19793534276455124 0.0004893964110929853 0.0010014133376131306 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 130989 6795 VTDPEKLNNY True H1975_Epitope_Rep3 1191.57716743171 1191.57606993586 31.09 2 0.19793236600748565 0.0004893964110929853 0.001001482000707478 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'DOT1L|p.D1250Efs*47|1|0.2|ENSG00000104885|chr19:2226271-2226293|CATCGGCCTGGCCAAGTCGGCGG/-|frameshift_variant', 'ENSG00000104885|ENST00000398665|DOT1L', 'DOT1L|p.N522Tfs*35|1|0.31|ENSG00000104885|chr19:2213545-2213545|A/-|frameshift_variant'] 11885 7877 DHIKDSFHSL True PC9_epitope_Rep4 1197.57783613805 1197.57619490379 37.726 3 0.19793120646775994 0.0004893964110929853 0.0010015087484021273 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 48480 9353 KAFQKIVVL True NCI_RA007_Epitope_Rep4 1044.6695516949198 1044.66844993586 42.832 2 0.19792430845024428 0.0004893964110929853 0.001001667883300909 ['ENSG00000136261|ENST00000258761|BZW2', 'ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 70328 11314 LVSESSDVLPK True PC9_epitope_Rep3 1172.6288686514001 1172.6277699358602 48.525 2 0.19792257009821598 0.0004893964110929853 0.0010017079904862732 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 87302 11843 QPQPQPYAV True PC9_epitope_Rep3 1026.5134449763398 1026.5123499358601 50.573 2 0.197920686629227 0.0004893964110929853 0.0010017514476218154 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 42675 9875 IEIETPEQA True H1975_Epitope_Rep2 1028.5026055091198 1028.5015099358602 42.972 2 0.1979167216253444 0.0004893964110929853 0.0010018429380318319 ['ENSG00000154767|ENST00000285021|XPC', 'ENST00000455144.6_1_3:14206267-14209863:-|nuORF'] 137800 10956 YEQLSSEALEA True H1975_Epitope_Rep1 1238.56666231766 1238.5655699358601 47.106 2 0.19791605093440232 0.0004893964110929853 0.00100185841470635 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 49937 18262 KILPDLNTV True PC9_epitope_Rep5 1011.59644632431 1011.59534993586 75.259 2 0.19791339274290612 0.0004893964110929853 0.0010019197567399146 ['ENSG00000142207|ENST00000382751|URB1'] 73664 17978 MYINEVERL True PC9_epitope_Rep5 1165.58014463717 1165.5790499358602 74.17 2 0.19791248096798367 0.0004893964110929853 0.0010019407982766195 ['PTPN14|p.Y570Ifs*131|1|0.11|ENSG00000152104|chr1:214384147-214384148|-/T|frameshift_variant', 'ENSG00000152104|ENST00000366956|PTPN14'] 138446 18694 YHLDSSGSYVF True PC9_epitope_Rep1 1273.5615173675699 1273.5604299358602 76.698 2 0.19791167975762197 0.0004893964110929853 0.0010019592886192947 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 95131 18274 RVFIGNLNTL True PC9_epitope_Rep4 1145.65569253593 1145.65458993586 78.362 2 0.19791157067218823 0.0004893964110929853 0.0010019618061207563 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 67956 6970 LTDDKLSQY True H1975_Epitope_Rep2 1081.52915461013 1081.52804993586 31.731 2 0.1978998261813335 0.0004893964110929853 0.0010022328855846506 ['ENSG00000121879|ENST00000263967|PIK3CA'] 22320 6189 ETDNM[Oxidation]FNRY True H1975_Epitope_Rep3 1204.48188752832 1204.48078993586 28.818 2 0.1978979690878279 0.0004893964110929853 0.001002275756663802 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 53143 16828 KPYNVYITV True PC9_epitope_Rep1 1095.59644632431 1095.5953499358602 69.553 2 0.19789328932769792 0.0004893964110929853 0.0010023837972730975 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 100111 9431 SISLYYTGEK True NCI_RA007_Epitope_Rep5 1159.57610480255 1159.5750099358602 42.913 2 0.19788474253531477 0.0004893964110929853 0.0010025811453629528 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 95110 9606 RVDPAKGLFY True H1975_Epitope_Rep3 1164.6291434349198 1164.6274949037902 41.964 3 0.19786484148049155 0.0004893964110929853 0.0010030408179009754 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 135585 19459 WLAEKLPTL True PC9_epitope_Rep4 1069.61718176889 1069.6160899358601 82.964 2 0.1978609862939142 0.0004893964110929853 0.001003129889041832 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 90558 8853 REMEENFAV True H1975_Epitope_Rep1 1123.49680893603 1123.49570993586 38.975 2 0.19785216522823232 0.0004893964110929853 0.0010033337228652702 ['ENSG00000026025|ENST00000544301|VIM'] 40300 15070 HQNQLLSSL True PC9_epitope_Rep5 1038.5458077337798 1038.54470993586 62.973 2 0.19784246099896452 0.0004893964110929853 0.0010035580124782414 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 42256 12004 IDTIEIITDR True H1975_Epitope_Rep1 1187.63976768827 1187.6386699358602 51.181 2 0.1978380855295755 0.0004893964110929853 0.001003659157236848 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 137322 10064 YDGIILPGK True H1975_Epitope_Rep3 974.54368247546 974.54258993586 43.749 2 0.1978279518032261 0.0004893964110929853 0.0010038934509741127 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 107726 5111 SVSEVVVNR True NCI_RA007_Epitope_Rep5 987.53490869691 987.53380993586 26.357 2 0.1978255988805117 0.0004893964110929853 0.0010039478588534374 ['ENST00000578759.1_1_17:60217316-60217976:-|nuORF', 'ENSG00000099821|ENST00000588649|POLRMT'] 130226 9723 VSEYISSDGSY True H1975_Epitope_Rep2 1205.5088130883698 1205.50770993586 42.385 2 0.19782242358488558 0.0004893964110929853 0.0010040212875855944 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12'] 48415 13677 IYVNPANTHQF True PC9_epitope_Rep1 1302.6356853673399 1302.63458993586 57.462 2 0.19781927112777048 0.0004893964110929853 0.0010040941935048214 ['ENSG00000132716|ENST00000368074|DCAF8'] 137484 6759 YEEEISKVA True H1975_Epitope_Rep3 1066.51825557326 1066.51714993586 30.952 2 0.19781556533249353 0.0004893964110929853 0.0010041799030963785 ['RNF168|p.T479Hfs*9|1|0.07|ENSG00000163961|chr3:196472100-196472100|T/-|frameshift_variant', 'ENSG00000163961|ENST00000318037|RNF168'] 8610 4862 ATYSVGMQK True NCI_RA007_Epitope_Rep3 983.4746169394699 983.47350993586 26.11 2 0.1978152971510692 0.0004893964110929853 0.0010041861060227674 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'nc|ENSG00000258628|A8MT19|RHPN2P1', 'ENST00000592247.1_1_19:33470904-33481620:-|nuORF'] 40520 7813 HRDYETATL True PC9_epitope_Rep3 1104.51998690876 1104.5188899358602 35.043 2 0.19779765586682044 0.0004893964110929853 0.0010045942261038688 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 69890 11624 LVIIEGDLER True NCI_RA007_Epitope_Rep1 1155.6499384491499 1155.6488499358602 49.186 2 0.19778669167056837 0.0004893964110929853 0.0010048479597399335 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF'] 107559 11806 SVPEFPLSPPK True NCI_RA007_Epitope_Rep5 1196.6441247927198 1196.64302993586 52.069 2 0.19778347434996194 0.0004893964110929853 0.0010049224272294466 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 77339 11290 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 48.474 2 0.1977607418371125 0.0004893964110929853 0.0010054487473590721 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 39745 12922 HLVGIDIFTGK True NCI_RA007_Epitope_Rep2 1198.6710082469 1198.66990993586 54.885 2 0.19775870412016164 0.0004893964110929853 0.0010054959396031847 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 96514 6177 SADPDNLKY True H1975_Epitope_Rep2 1021.4716397340101 1021.47054993586 28.73 2 0.19775653986589023 0.0004893964110929853 0.0010055460648046137 ['ENSG00000157106|ENST00000446231|SMG1', 'SMG1|p.S34T|1|0.44|ENSG00000157106|chr16:18896948-18896948|C/G|missense_variant'] 17121 5100 EGM[Oxidation]NIVEAM[Oxidation]ER True H1975_Epitope_Rep3 1309.5642376337298 1309.5631299358602 24.729 2 0.1977508451915012 0.0004893964110929853 0.0010056779682571478 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 54652 11207 KYLPESNTL True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 48.434 2 0.1977499232206392 0.0004893964110929853 0.001005699325129367 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 54868 21708 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 88.544 2 0.1977483770445512 0.0004893964110929853 0.001005735142342033 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 96574 10419 SAFGVIIEK True NCI_RA007_Epitope_Rep4 962.54368247546 962.54258993586 46.93 2 0.1977474146311812 0.0004893964110929853 0.001005757437320805 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 48871 8962 KEAIETIVAA True H1975_Epitope_Rep2 1043.5862755634298 1043.5851699358602 39.426 2 0.1977454363899582 0.0004893964110929853 0.0010058032662186318 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 56494 18288 LDFEHFLPM[Oxidation]LQ True H1975_Epitope_Rep3 1404.6747736784398 1404.67366993586 76.649 2 0.19774206266223163 0.0004893964110929853 0.0010058814284663175 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 62640 11340 LLLEPYNKY True H1975_Epitope_Rep2 1151.62266107215 1151.6215699358602 48.668 2 0.19774124992722775 0.0004893964110929853 0.0010059002587547558 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 71391 17825 LYSEVSHLL True PC9_epitope_Rep4 1059.56006081559 1059.5589699358602 76.596 2 0.19774059602209484 0.0004893964110929853 0.0010059154093644553 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 141624 5937 YTSDSPGSY True H1975_Epitope_Rep2 975.38215602327 975.38160496793 27.821 1 0.1977283290985819 0.0004893964110929853 0.0010061996694159983 ['ENSG00000160877|ENST00000292431|NACC1'] 73717 19401 MYSFVNDKF True PC9_epitope_Rep1 1149.5164817514499 1149.5153899358602 79.438 2 0.19772799360012502 0.0004893964110929853 0.0010062074450159675 ['ENSG00000163874|ENST00000373087|ZC3H12A', 'ZC3H12B|p.V574Gfs*7|1|0.22|ENSG00000102053|chrX:65502412-65502413|-/G|frameshift_variant', 'nc|ENSG00000102053|Q5HYM0-2|ZC3H12B', 'ENSG00000102053|ENST00000338957|ZC3H12B', 'ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 75133 10972 NHYNNIM[Oxidation]AL True PC9_epitope_Rep1 1104.50222905008 1104.50112993586 47.093 2 0.1977270051637349 0.0004893964110929853 0.0010062303536264986 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 33638 11428 GLGLDDALEPR True H1975_Epitope_Rep1 1154.59315184902 1154.5920499358601 48.938 2 0.19772295634696954 0.0004893964110929853 0.0010063241969567505 ['ENSG00000183207|ENST00000595090|RUVBL2', 'ENST00000594017.5_1_19:49497156-49513425:+|nuORF'] 17771 17600 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.51708993586 72.976 2 0.19772065655478274 0.0004893964110929853 0.0010063775053663396 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 95245 14796 RVLQALEGLK True PC9_epitope_Rep5 1125.6869926642098 1125.6858899358601 61.913 2 0.19771569653874818 0.0004893964110929853 0.001006492486510533 ['ENSG00000105372|ENST00000598742|RPS19'] 95431 19325 RWFQPAIPSW True PC9_epitope_Rep6 1286.6560268890996 1286.65492993586 86.983 2 0.19771534881722044 0.0004893964110929853 0.0010065005477485982 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 77747 12043 NTPEYMEKI True PC9_epitope_Rep2 1123.52196105471 1123.5208699358602 51.64 2 0.19771062236129108 0.0004893964110929853 0.0010066101277323707 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 108490 13909 SYMGHFDLL True NCI_RA007_Epitope_Rep3 1081.49026700361 1081.4891699358602 62.026 2 0.19769552420584177 0.0004893964110929853 0.0010069602493683644 ['ENSG00000169976|ENST00000367569|SF3B5'] 142132 20561 YVQDFLNHL True PC9_epitope_Rep1 1147.56620882519 1147.5651099358602 83.9 2 0.1976937125475177 0.0004893964110929853 0.0010070022693795717 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 85207 8806 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 38.838 2 0.1976826139619281 0.0004893964110929853 0.0010072597308596687 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 72669 4299 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 21.651 2 0.19768157286726418 0.0004893964110929853 0.0010072838852308163 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 50007 10144 KIYEGQVEV True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 46.696 2 0.1976801036780004 0.0004893964110929853 0.0010073179727858217 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 108238 22846 SYIDVLPEF True PC9_epitope_Rep2 1081.53317736141 1081.53208993586 93.367 2 0.19766302904624003 0.0004893964110929853 0.001007714216573422 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 78593 19938 NYSGAAEYLYF True PC9_epitope_Rep6 1296.56626839484 1296.56516993586 89.35 2 0.19765654082900144 0.0004893964110929853 0.0010078648268777397 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 43227 17859 IFKPPDPDNTF True PC9_epitope_Rep5 1289.62920300457 1289.62810993586 73.713 2 0.19765210146072595 0.0004893964110929853 0.001007967890472888 ['ENSG00000165943|ENST00000298894|MOAP1'] 117076 21922 TVIQFLERI True PC9_epitope_Rep5 1117.64954452633 1117.64844993586 89.365 2 0.19764512683519908 0.0004893964110929853 0.0010081298335021822 ['ENSG00000142207|ENST00000382751|URB1'] 76416 18167 NQDKNFAFL True PC9_epitope_Rep5 1095.53490869691 1095.53380993586 74.888 2 0.1976187027998969 0.0004893964110929853 0.0010087436068576907 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 42633 3514 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 18.368 2 0.19761520677289382 0.0004893964110929853 0.00100882484009007 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 38398 7414 HEMFPAVHA True H1975_Epitope_Rep2 1037.4752856458097 1037.47418993586 33.46 2 0.19761186913977788 0.0004893964110929853 0.001008902399023521 ['ENSG00000113638|ENST00000337702|TTC33'] 17795 17737 EHSLVIDTL True PC9_epitope_Rep3 1025.53932537101 1025.53822993586 73.423 2 0.1976112459875178 0.0004893964110929853 0.0010089168803142721 ['ENSG00000143256|ENST00000368010|PFDN2'] 6884 18731 AQIEDLQVKL True PC9_epitope_Rep1 1155.6499384491499 1155.6488499358602 76.837 2 0.19760890420676716 0.0004893964110929853 0.0010089713022771894 ['ENSG00000157933|ENST00000378536|SKI'] 97750 11370 SEIPKLPAV True NCI_RA007_Epitope_Rep4 952.5593325395998 952.55822993586 50.647 2 0.19759443578965424 0.0004893964110929853 0.0010093076072655634 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 138866 11631 YKDGTELEL True PC9_epitope_Rep6 1066.51825557326 1066.51714993586 55.861 2 0.19759430510534634 0.0004893964110929853 0.0010093106454137615 ['ENSG00000143815|ENST00000272163|LBR'] 8306 6746 ATILAGDVKVK True NCI_RA007_Epitope_Rep4 1113.6757592741699 1113.67466993586 32.569 2 0.19759288916595127 0.0004893964110929853 0.0010093435637544136 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2'] 7534 15408 ASDYFDQLY True H1975_Epitope_Rep1 1120.47130538084 1120.47020993586 64.537 2 0.19759224513604373 0.0004893964110929853 0.0010093585367824593 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 134700 19774 VYTLLTTHL True PC9_epitope_Rep3 1059.5964463243101 1059.5953499358602 81.289 2 0.19758208635444682 0.0004893964110929853 0.001009594747398112 ['nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 118551 12726 TYQQVQQTL True PC9_epitope_Rep5 1107.55603806431 1107.5549499358601 53.958 2 0.19757891147431017 0.0004893964110929853 0.0010096685806504902 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 88833 17456 QVAFDFTKV True PC9_epitope_Rep6 1053.54949613189 1053.54838993586 79.765 2 0.19757420791894453 0.0004893964110929853 0.0010097779738798265 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 100285 5171 SKAEAESLYQS True H1975_Epitope_Rep2 1211.5669966708301 1211.56588993586 24.966 2 0.19756470325027534 0.0004893964110929853 0.0010099990655756202 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 134860 11003 VYVKDLSSF True NCI_RA007_Epitope_Rep4 1056.54916177872 1056.5480699358602 49.191 2 0.19756260111503252 0.0004893964110929853 0.0010100479706944543 ['ENSG00000101350|ENST00000375712|KIF3B'] 108360 17314 SYLEKQVVTF True PC9_epitope_Rep2 1212.6390394122798 1212.6379499358602 71.857 2 0.19756221378164093 0.0004893964110929853 0.0010100569820700284 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 106011 10473 SSVPGVRLLQ True NCI_RA007_Epitope_Rep4 1054.61349337078 1054.6123899358602 47.134 2 0.19755149132298497 0.0004893964110929853 0.0010103064738593256 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 54817 11551 KYPDRVPVI True PC9_epitope_Rep2 1085.62332977849 1085.62222993586 49.757 2 0.19755073210639584 0.0004893964110929853 0.0010103241417683745 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 27794 6482 FQDDDQTRV True PC9_epitope_Rep1 1122.4941660837399 1122.4930699358601 29.738 2 0.19754688839114198 0.0004893964110929853 0.0010104135945316144 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 138496 14780 YHSEVPVSL True PC9_epitope_Rep3 1029.51311062317 1029.51257496793 61.987 1 0.19754452461522756 0.0004893964110929853 0.0010104686093890614 ['ENSG00000115306|ENST00000356805|SPTBN1'] 104324 7772 SQIQEFKEA True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 35.268 2 0.19754292143199373 0.0004893964110929853 0.0010105059238136233 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 90592 9264 REMEENFAVEA True H1975_Epitope_Rep2 1323.57651580871 1323.57540993586 40.591 2 0.19753964149619288 0.0004893964110929853 0.0010105822693098614 ['ENSG00000026025|ENST00000544301|VIM'] 95111 11423 RVDPIGPLSY True H1975_Epitope_Rep1 1115.59750895347 1115.59640993586 48.919 2 0.19753252792540635 0.0004893964110929853 0.001010747868370409 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 27818 16622 FQDENHLYL True PC9_epitope_Rep1 1177.54038800017 1177.53928993586 68.764 2 0.19752910252955874 0.0004893964110929853 0.0010108276189483578 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 97483 8018 SEEIESAFR True H1975_Epitope_Rep3 1066.49310345458 1066.49200993586 35.814 2 0.1975242625754153 0.0004893964110929853 0.0010109403142412137 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 49515 7797 KFIDTTSKF True NCI_RA007_Epitope_Rep1 1085.57571087973 1085.57460993586 34.319 2 0.19751832673172143 0.0004893964110929853 0.001011078543836108 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 84256 21868 PYNDYFEYF True PC9_epitope_Rep4 1256.50260550912 1256.5015099358602 92.324 2 0.19751778681180104 0.0004893964110929853 0.0010110911180374702 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 49339 9733 KESDIVLYA True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 42.424 2 0.19751676710382948 0.0004893964110929853 0.0010111148664561536 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 106196 5938 STDSETLRY True H1975_Epitope_Rep2 1070.48801807414 1070.4869299358602 27.823 2 0.19751602849812713 0.0004893964110929853 0.0010111320685121908 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 107369 21018 SVLKELLQV True PC9_epitope_Rep3 1027.6277464525897 1027.62664993586 86.123 2 0.1975127133369363 0.0004893964110929853 0.0010112092819136113 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2'] 55293 8565 LADVNNIGKY True H1975_Epitope_Rep2 1105.57677350889 1105.57566993586 37.898 2 0.19750553995753106 0.0004893964110929853 0.0010113763772947476 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 140357 13206 YRDPTTVTTL True PC9_epitope_Rep3 1165.59790287629 1165.5968099358602 55.833 2 0.1975003801574513 0.0004893964110929853 0.0010114965858504358 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 95241 12759 RVLQALEGLK True PC9_epitope_Rep2 1125.6869926642098 1125.6853349037901 54.382 3 0.1974947479274518 0.0004893964110929853 0.0010116278170251574 ['ENSG00000105372|ENST00000598742|RPS19'] 7201 11123 AQYLINARL True NCI_RA007_Epitope_Rep5 1060.60292868708 1060.60182993586 49.421 2 0.19748294303344036 0.0004893964110929853 0.0010119029269063922 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3', 'PCBP1|p.S349F|1|0.19|ENSG00000169564|chr2:70088789-70088789|C/T|missense_variant'] 90507 5224 RELHLMRNEA True NCI_RA007_Epitope_Rep4 1267.6455388583897 1267.6438949037902 26.631 3 0.19748071018116897 0.0004893964110929853 0.001011954971365225 ['ENSG00000117614|ENST00000236273|SYF2'] 141156 8137 YSTDVSVDEVK True NCI_RA007_Epitope_Rep1 1240.5823123818002 1240.5812099358602 35.649 2 0.19747298361997132 0.0004893964110929853 0.001012135086708575 ['nc|ENSG00000148672|P00367-3|GLUD1', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1'] 22397 11113 ETEGPHVLLY True H1975_Epitope_Rep2 1156.5764391557198 1156.57534993586 47.781 2 0.19746205245088652 0.0004893964110929853 0.0010123899601938884 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'CON__P01030'] 2007 5745 AEIRHVLVT True H1975_Epitope_Rep3 1036.6029286870798 1036.60182993586 27.124 2 0.1974598135333214 0.0004893964110929853 0.0010124421712173909 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 78299 19617 NYINDLRNF True PC9_epitope_Rep5 1167.56727145435 1167.5661699358602 80.51 2 0.19745698772369172 0.0004893964110929853 0.0010125080722785515 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 20036 11328 EMDNYEPGVY True H1975_Epitope_Rep2 1215.47540478511 1215.4743099358602 48.622 2 0.1974509351900538 0.0004893964110929853 0.00101264923864983 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1'] 53364 14534 KQTALVELLK True PC9_epitope_Rep1 1141.7070594024499 1141.7054249037901 60.729 3 0.1974485067400487 0.0004893964110929853 0.0010127058841929459 ['CON__P02769'] 43713 10041 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 43.947 2 0.19744800591645595 0.0004893964110929853 0.001012717566699952 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 68848 16380 LTMEVIRQV True PC9_epitope_Rep2 1087.60596546219 1087.60486993586 68.252 2 0.19744357323533446 0.0004893964110929853 0.0010128209719303522 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 24844 11505 FAYDGKDYL True H1975_Epitope_Rep2 1090.4971262058598 1090.4960299358602 49.311 2 0.19744254206089382 0.0004893964110929853 0.0010128450286031796 ['ENSG00000204592|ENST00000376630|HLA-E'] 121465 5709 VEYETYKEA True H1975_Epitope_Rep3 1130.5131701928199 1130.5120699358602 26.988 2 0.19743686125172943 0.0004893964110929853 0.00101297756870156 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 58574 11845 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.59187496793 50.559 1 0.19743681811871083 0.0004893964110929853 0.0010129785751131998 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 72666 5499 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 26.164 2 0.1974276729864423 0.0004893964110929853 0.0010131919787797657 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 52702 8624 KMDDLNLHY True H1975_Epitope_Rep1 1147.53319444475 1147.53208993586 38.099 2 0.1974272570172388 0.0004893964110929853 0.0010132016865842322 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 107538 16364 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 70.906 2 0.1974237616062638 0.0004893964110929853 0.0010132832654581262 ['ENSG00000073756|ENST00000367468|PTGS2'] 59739 13553 LGDLYEEEMR True PC9_epitope_Rep4 1253.5598031154097 1253.5587099358602 60.026 2 0.1974217256155468 0.0004893964110929853 0.0010133307861766325 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 72542 20576 MLLDVMHTV True PC9_epitope_Rep3 1057.5300236406101 1057.52892993586 84.412 2 0.19738307809013103 0.0004893964110929853 0.0010142332565882164 ['nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN'] 6996 18618 AQLPALWKA True PC9_epitope_Rep5 996.5756513100799 996.57454993586 76.641 2 0.19736773466240895 0.0004893964110929853 0.001014591769225967 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2', 'ENST00000588777.1_1_19:12986806-12989487:-|nuORF'] 42388 9818 IEDFEARIA True H1975_Epitope_Rep1 1062.53457434374 1062.53346993586 42.693 2 0.19736124518882298 0.0004893964110929853 0.0010147434397037266 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 53646 18579 KSADEVLFTGV True PC9_epitope_Rep5 1164.6026539035602 1164.60154993586 76.488 2 0.1973605293625745 0.0004893964110929853 0.0010147601712217377 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 77799 10554 NTVELLVEDK True NCI_RA007_Epitope_Rep1 1158.6132185872598 1158.6121299358601 45.036 2 0.197355544720223 0.0004893964110929853 0.0010148766884974343 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 33082 10552 GINVTDFTR True NCI_RA007_Epitope_Rep2 1021.51925863277 1021.51816993586 45.642 2 0.19735540223546766 0.0004893964110929853 0.0010148800193118556 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 90484 6954 RELEDDARVIA True H1975_Epitope_Rep1 1285.6626283911698 1285.66099490379 31.789 3 0.19735517155523558 0.0004893964110929853 0.001014885411863172 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 134823 16420 VYTYIQSRF True PC9_epitope_Rep5 1175.5975089534697 1175.59640993586 68.16 2 0.1973551593260765 0.0004893964110929853 0.0010148856977418195 ['DYRK2|p.A390*|1|0.05|ENSG00000127334|chr12:67658074-67658075|-/TA|frameshift_variant', 'DYRK2|p.P391Efs*19|1|0.04|ENSG00000127334|chr12:67658076-67658077|-/CGAGGTTTGTAGAGGT|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 24858 17879 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 73.564 2 0.19734602562271822 0.0004893964110929853 0.0010150992370853368 ['ENSG00000204592|ENST00000376630|HLA-E'] 65064 19144 LQLDKEFQL True PC9_epitope_Rep4 1132.61282466444 1132.61172993586 81.732 2 0.19733415967030582 0.0004893964110929853 0.0010153767217165315 ['ENSG00000068438|ENST00000348411|FTSJ1', 'nc|ENSG00000068438|Q9UET6-2|FTSJ1', 'ENST00000487353.5_1_X:48336396-48336561:+|nuORF'] 58311 13601 LEMDLKDLEA True NCI_RA007_Epitope_Rep5 1175.57439055039 1175.5732899358602 59.003 2 0.1973322088605004 0.0004893964110929853 0.0010154223485745336 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 90009 9013 RDQIVTVSV True H1975_Epitope_Rep1 1015.56620882519 1015.56510993586 39.573 2 0.1973134670846245 0.0004893964110929853 0.001015860798668212 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 87785 14409 QRDGIITQL True PC9_epitope_Rep5 1042.5771078620598 1042.5760099358602 60.423 2 0.19730816543471055 0.0004893964110929853 0.0010159848613224415 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF', 'AKAP9|p.V1050Wfs*10|1|0.45|ENSG00000127914|chr7:92003064-92003064|G/-|frameshift_variant', 'AKAP9|p.K291Efs*9|1|0.09|ENSG00000127914|chr7:91995734-91995735|-/A|frameshift_variant', 'AKAP9|p.H562Qfs*4|1|0.07|ENSG00000127914|chr7:92001602-92001603|AT/-|frameshift_variant'] 88613 7659 QTDTLQNDY True H1975_Epitope_Rep2 1096.4672826295598 1096.46618993586 34.414 2 0.19730285309776913 0.0004893964110929853 0.0010161091893010987 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 95402 13751 RWFDKSFTF True NCI_RA007_Epitope_Rep4 1232.59784330664 1232.59674993586 60.12 2 0.19730220657883726 0.0004893964110929853 0.0010161243212335911 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 71072 15834 LYLDEAHSI True PC9_epitope_Rep5 1059.52367530687 1059.52256993586 65.898 2 0.19729418857162753 0.0004893964110929853 0.001016312003418788 ['ENSG00000100596|ENST00000216484|SPTLC2'] 137509 6322 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 29.252 2 0.19728485781164504 0.0004893964110929853 0.0010165304577430393 ['ENSG00000127184|ENST00000247655|COX7C'] 29009 9514 FTEHEVQIY True H1975_Epitope_Rep2 1164.54513902744 1164.5440499358601 41.565 2 0.1972846816434721 0.0004893964110929853 0.0010165345826937413 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'RPS6KA5|p.S448Vfs*9|1|0.24|ENSG00000100784|chr14:90900145-90900145|T/-|frameshift_variant', 'nc|ENSG00000100784|O75582-3|RPS6KA5'] 43522 10283 IGNLNTLVVK True NCI_RA007_Epitope_Rep1 1069.64954452633 1069.64844993586 44.006 2 0.19727733499556302 0.0004893964110929853 0.0010167066182724064 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 130874 4900 VTDALNATR True NCI_RA007_Epitope_Rep2 959.50360856863 959.50250993586 23.682 2 0.1972765274892594 0.0004893964110929853 0.001016725529332151 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 65964 15334 LSDVFPGVQY True H1975_Epitope_Rep3 1123.5549754351498 1123.5538699358601 64.393 2 0.19726844980505007 0.0004893964110929853 0.0010169147207289354 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 90580 8903 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 39.212 2 0.19725964906398896 0.0004893964110929853 0.0010171208873796852 ['ENSG00000026025|ENST00000544301|VIM'] 96116 14043 RYNESLTNF True PC9_epitope_Rep5 1142.5356369729 1142.53452993586 59.031 2 0.19725953725254777 0.0004893964110929853 0.001017123506950367 ['ENSG00000113300|ENST00000261951|CNOT6'] 83305 7761 PTDPKVVVY True H1975_Epitope_Rep2 1016.5542471591598 1016.55314993586 34.804 2 0.19725101542240311 0.0004893964110929853 0.001017323180277779 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 114080 4502 TPFQGQGHGA True PC9_epitope_Rep1 998.4569927293797 998.45588993586 22.199 2 0.1972503256243639 0.0004893964110929853 0.0010173393445196553 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 133878 12867 VYGSFASKL True PC9_epitope_Rep4 970.5123823471799 970.51128993586 57.366 2 0.19725010380765703 0.0004893964110929853 0.0010173445424710111 ['ENSG00000155096|ENST00000337198|AZIN1'] 11992 5593 DHQQNSPTL True PC9_epitope_Rep1 1038.47303671634 1038.47192993586 26.341 2 0.19724722346679036 0.0004893964110929853 0.0010174120414811146 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.E121Q|1|0.18|ENSG00000173614|chr1:9981092-9981092|G/C|missense_variant'] 54854 22082 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 89.75 2 0.19724460821662848 0.0004893964110929853 0.001017473332144247 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 76412 17458 NQDKNFAFL True PC9_epitope_Rep2 1095.53490869691 1095.53380993586 72.404 2 0.19724236257971467 0.0004893964110929853 0.0010175259635539667 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 48945 9558 KEEEQPLWAA True H1975_Epitope_Rep2 1199.58225281215 1199.5811499358601 41.739 2 0.1972390893494407 0.0004893964110929853 0.0010176026837502349 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 21497 14489 ERLQIDEQL True PC9_epitope_Rep2 1142.5931518490197 1142.5920499358601 61.002 2 0.19723597205691623 0.0004893964110929853 0.0010176757543644396 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 45583 19932 IQTAVRLLL True PC9_epitope_Rep5 1025.6597152872098 1025.65860993586 81.725 2 0.1972242398866887 0.0004893964110929853 0.0010179508084115568 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 76896 8797 NRDMTTAEI True PC9_epitope_Rep5 1049.48115887189 1049.48006993586 38.78 2 0.19722141893211992 0.0004893964110929853 0.0010180169552011585 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'nc|ENSG00000068885|Q9P2H3-2|IFT80', 'ENSG00000068885|ENST00000326448|IFT80'] 5182 5375 ALM[Oxidation]DEVVK True H1975_Epitope_Rep3 919.4684693103098 919.46736993586 25.741 2 0.19722058690159022 0.0004893964110929853 0.0010180364657849208 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 26154 12643 FHAIIQERL True PC9_epitope_Rep2 1125.62947778809 1125.62782490379 53.941 3 0.1972191116516413 0.0004893964110929853 0.0010180710603745228 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 131050 10817 VTDSGPTFNY True H1975_Epitope_Rep3 1099.4822044177101 1099.48110993586 46.686 2 0.1972151571393951 0.0004893964110929853 0.0010181637994441037 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 7828 5178 ASVNTLVNK True NCI_RA007_Epitope_Rep4 944.52909504048 944.52798993586 26.443 2 0.19720835717054425 0.0004893964110929853 0.0010183232884225042 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 20798 10289 EQIEAGTPGRL True PC9_epitope_Rep5 1169.6040508858898 1169.6029499358601 44.564 2 0.19720609382983706 0.0004893964110929853 0.00101837637920755 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 121355 7035 VEVILQHSA True NCI_RA007_Epitope_Rep5 994.5447451046201 994.54364993586 33.738 2 0.1972014197051944 0.0004893964110929853 0.0010184860281127063 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant', 'ENST00000472714.1_1_7:107569804-107570089:-|nuORF'] 95190 16481 RVIEGDVVSAL True PC9_epitope_Rep2 1156.6451874218799 1156.6440899358602 68.635 2 0.19719780986971364 0.0004893964110929853 0.001018570718276074 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 7191 9791 AQYEHDLEV True PC9_epitope_Rep6 1102.4931034545798 1102.49200993586 48.11 2 0.1971946330958886 0.0004893964110929853 0.0010186452542443635 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 108499 20646 SYMGHFDLL True PC9_epitope_Rep3 1081.49026700361 1081.4891699358602 84.686 2 0.1971909687104736 0.0004893964110929853 0.0010187312377330634 ['ENSG00000169976|ENST00000367569|SF3B5'] 104721 21447 SQVEEELFSV True PC9_epitope_Rep1 1165.55028397753 1165.54918993586 87.334 2 0.1971878791491074 0.0004893964110929853 0.0010188037388369235 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 11799 5944 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 28.254 2 0.1971841271298611 0.0004893964110929853 0.001018891792447191 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 6977 19740 AQLELISRL True PC9_epitope_Rep3 1041.61824439805 1041.6171499358602 81.158 2 0.19718010504933814 0.0004893964110929853 0.001018986192418971 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 75117 10750 NHVTPPNVSL True PC9_epitope_Rep6 1076.56145779792 1076.56036993586 52.174 2 0.197176753085944 0.0004893964110929853 0.0010190648711519924 ['ENSG00000171223|ENST00000302754|JUNB'] 118637 17081 TYSPALNKMF True PC9_epitope_Rep4 1170.5743309807401 1170.5732299358601 73.698 2 0.197175605197361 0.0004893964110929853 0.001019091816289083 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 15084 18866 DYSSILQKF True PC9_epitope_Rep6 1099.55497543515 1099.5538699358601 85.217 2 0.19716777010238679 0.0004893964110929853 0.0010192757536640993 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 45418 15062 IQHDLIFSL True NCI_RA007_Epitope_Rep5 1084.5916952970401 1084.5905899358602 64.603 2 0.19716710818743632 0.0004893964110929853 0.0010192912943623833 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 54573 5443 KYISKPENL True PC9_epitope_Rep6 1090.60225998074 1090.60116993586 28.856 2 0.19716655101389313 0.0004893964110929853 0.0010193043760850984 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 115796 9532 TSDHFETIMKY True H1975_Epitope_Rep2 1370.6176523446998 1370.6165499358601 41.637 2 0.1971650547306773 0.0004893964110929853 0.001019339507735909 ['ENSG00000136628|ENST00000366923|EPRS1'] 115660 15292 TRYDLYHTF True PC9_epitope_Rep5 1214.5720224816198 1214.57038490379 63.83 3 0.19715938107679867 0.0004893964110929853 0.0010194727320690157 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 118727 19888 TYVENLRLL True PC9_epitope_Rep3 1119.62880908175 1119.6277099358601 81.738 2 0.19715403486570862 0.0004893964110929853 0.0010195982836232733 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 104980 13652 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59502993586 57.535 2 0.19713978991616324 0.0004893964110929853 0.0010199328907407306 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 118549 12792 TYQQVQQTL True PC9_epitope_Rep1 1107.55603806431 1107.5549499358601 54.079 2 0.19713920499416496 0.0004893964110929853 0.0010199466326348211 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 109627 10739 TEAGMFAIRA True H1975_Epitope_Rep2 1065.5277151414898 1065.52660993586 46.335 2 0.19713886963715135 0.0004893964110929853 0.001019954511445258 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'PSMC2|p.R400L|1|0.49|ENSG00000161057|chr7:103367951-103367951|G/T|missense_variant', 'nc|ENSG00000161057|P35998-2|PSMC2'] 67945 11338 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 48.66 2 0.19713791499163982 0.0004893964110929853 0.001019976940029656 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 115102 9027 TRDETNYGI True PC9_epitope_Rep1 1067.4883524273098 1067.48724993586 39.572 2 0.19712737397320915 0.0004893964110929853 0.0010202246251761657 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 98361 10832 SEYLRYEDTL True H1975_Epitope_Rep1 1287.59829679911 1287.5971899358601 46.627 2 0.19712626528016478 0.0004893964110929853 0.00102025067994028 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 67336 7786 LSSETEVALAR True NCI_RA007_Epitope_Rep1 1174.6193665968597 1174.61826993586 34.276 2 0.19712072568814276 0.0004893964110929853 0.0010203808727354414 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 7916 6209 ATANQIILK True NCI_RA007_Epitope_Rep3 970.58113061334 970.58002993586 31.431 2 0.19711903354584925 0.0004893964110929853 0.0010204206451835227 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 115701 8851 TSALPIIQK True NCI_RA007_Epitope_Rep2 969.58588164061 969.58478993586 39.076 2 0.1971154414902897 0.0004893964110929853 0.0010205050787226518 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 24151 15256 EYQDLLNVK True PC9_epitope_Rep2 1120.5764391557198 1120.57534993586 63.956 2 0.19711427382136495 0.0004893964110929853 0.0010205325270285248 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 9328 4037 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 21.953 2 0.19711355779123252 0.0004893964110929853 0.0010205493590613557 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 114697 15199 TQIDHYVGI True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 63.283 2 0.19710931031816614 0.0004893964110929853 0.0010206492119885504 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 101615 18183 SLLQTLYKV True PC9_epitope_Rep6 1063.62774645259 1063.62664993586 82.581 2 0.1971071472182987 0.0004893964110929853 0.0010207000676014084 ['ENSG00000100401|ENST00000356244|RANGAP1'] 17800 17591 EHSLVIDTL True PC9_epitope_Rep5 1025.53932537101 1025.53822993586 72.672 2 0.1970991868457011 0.0004893964110929853 0.001020887242021524 ['ENSG00000143256|ENST00000368010|PFDN2'] 142330 10595 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 46.069 2 0.19709752575212933 0.0004893964110929853 0.0010209263041098197 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 32034 12971 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 54.97 2 0.19708756482173834 0.0004893964110929853 0.0010211605756649934 ['ENSG00000051523|ENST00000261623|CYBA'] 11998 7919 DHQREITSL True PC9_epitope_Rep3 1097.54653600977 1097.54542993586 35.441 2 0.1970840996345033 0.0004893964110929853 0.001021242086192586 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1'] 92504 20771 RLYDGLFKVI True PC9_epitope_Rep1 1222.70739375562 1222.70628993586 84.723 2 0.1970779545952709 0.0004893964110929853 0.0010213866500946808 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 23929 15145 EYLERAPEL True PC9_epitope_Rep5 1118.5607890915799 1118.5596899358602 63.263 2 0.19707698064327533 0.0004893964110929853 0.0010214095644931922 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 41307 15861 HVVDFFNRV True PC9_epitope_Rep2 1131.58252759567 1131.5814299358601 66.268 2 0.197076408357371 0.0004893964110929853 0.001021423029039207 ['ENSG00000172081|ENST00000357066|MOB3A'] 24295 21419 EYTRALFLL True PC9_epitope_Rep1 1124.62299542532 1124.62188993586 87.225 2 0.1970689368809823 0.0004893964110929853 0.0010215988316988971 ['ENSG00000129933|ENST00000262815|MAU2'] 88240 5137 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 24.836 2 0.19706738428184953 0.0004893964110929853 0.0010216353679190304 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 9825 16933 AYLEAIHNF True PC9_epitope_Rep4 1076.52909504048 1076.5279899358602 73.119 2 0.19705849356725344 0.0004893964110929853 0.0010218446120706236 ['ENSG00000042753|ENST00000263270|AP2S1'] 21742 10544 ERTNIQVTV True PC9_epitope_Rep5 1058.57202248162 1058.57092993586 45.547 2 0.19705529895796084 0.0004893964110929853 0.0010219198081205829 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.G1211W|1|0.07|ENSG00000156535|chr6:73811076-73811076|G/T|missense_variant'] 23935 21849 EYLIVFPKL True PC9_epitope_Rep3 1120.6532329244399 1120.65212993586 89.344 2 0.19704222121998888 0.0004893964110929853 0.0010222276952471187 ['ENSG00000198060|ENST00000358935|MARCHF5'] 74041 8622 NDLAVVDVR True H1975_Epitope_Rep3 999.53490869691 999.53380993586 38.158 2 0.19703611975308674 0.0004893964110929853 0.0010223713729441272 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 134859 10670 VYVKDLSSF True NCI_RA007_Epitope_Rep3 1056.54916177872 1056.5480699358602 49.017 2 0.19703284475873895 0.0004893964110929853 0.001022448501053232 ['ENSG00000101350|ENST00000375712|KIF3B'] 1429 14702 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48546993586 61.713 2 0.19701869932992347 0.0004893964110929853 0.0010227817015403982 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 24224 7187 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56899490379 32.458 3 0.1970137418782076 0.0004893964110929853 0.0010228985018030702 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 76461 13546 NQFPGFKEV True PC9_epitope_Rep6 1064.52909504048 1064.5279899358602 63.836 2 0.19701074363107243 0.0004893964110929853 0.001022969148629701 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 44686 14308 ILTERGYSF True PC9_epitope_Rep4 1084.55530978832 1084.5542099358602 62.935 2 0.1970107315612841 0.0004893964110929853 0.0010229694330365054 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 125431 5430 VITIM[Oxidation]QNPR True NCI_RA007_Epitope_Rep5 1086.58556475122 1086.5844699358602 27.574 2 0.1970043508059046 0.0004893964110929853 0.0010231197972517452 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 77854 16543 NVELDPEIQ True PC9_epitope_Rep5 1055.51350454599 1055.51297496793 68.634 1 0.1970038478059275 0.0004893964110929853 0.0010231316515237942 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 54478 14755 KYGRIVEVL True PC9_epitope_Rep1 1075.6389798426299 1075.6378899358601 61.574 2 0.19698902742127908 0.0004893964110929853 0.0010234809874590293 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX'] 43806 12080 IHSENFQTL True PC9_epitope_Rep1 1087.5298233164701 1087.5287299358602 51.326 2 0.1969829051328639 0.0004893964110929853 0.0010236253327487834 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 22893 6346 EVDSGRQIEY True H1975_Epitope_Rep2 1194.5516809598598 1194.5505899358602 29.339 2 0.19697898542332956 0.0004893964110929853 0.0010237177585207128 ['ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF', 'LMNB1|p.L380Hfs*32|1|0.07|ENSG00000113368|chr5:126819120-126819121|-/ATATTTACTT|frameshift_variant'] 2404 5514 AEQERNEFV True H1975_Epitope_Rep2 1120.5149015283198 1120.51380993586 26.222 2 0.19695706936138563 0.0004893964110929853 0.0010242346880176994 ['ENSG00000179933|ENST00000319074|C14orf119'] 118189 20739 TYKDYVDLF True PC9_epitope_Rep1 1162.55464108198 1162.55354993586 84.599 2 0.196943692588335 0.0004893964110929853 0.0010245503317548963 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 73222 19535 MSDLLSPLLY True H1975_Epitope_Rep3 1150.59439771898 1150.5933099358601 81.855 2 0.19693274923405565 0.0004893964110929853 0.0010248086281018174 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 54491 18407 KYIDFDHVF True PC9_epitope_Rep4 1182.57095985246 1182.5693249037902 78.868 3 0.19691017978886727 0.0004893964110929853 0.0010253415416837009 ['ENSG00000007545|ENST00000397412|CRAMP1'] 34766 12061 GQFSGFPFEK True NCI_RA007_Epitope_Rep3 1142.53965972418 1142.53856993586 54.563 2 0.1969013852964645 0.0004893964110929853 0.0010255492739687155 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 5135 20477 ALLPHLYTL True PC9_epitope_Rep2 1039.60661708519 1039.6055299358602 84.195 2 0.196899842061839 0.0004893964110929853 0.001025585730641614 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 14432 8494 DTDYRSMEY True H1975_Epitope_Rep3 1178.4550036936998 1178.45390993586 37.657 2 0.1968975186177763 0.0004893964110929853 0.0010256406210786754 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 53365 13121 KQTALVELLK True PC9_epitope_Rep2 1141.7070594024499 1141.7054249037901 55.744 3 0.1968934832894358 0.0004893964110929853 0.0010257359610990238 ['CON__P02769'] 53384 19496 KQVEDDIQQLL True PC9_epitope_Rep2 1327.6983451935498 1327.69724993586 80.374 2 0.19689307164324193 0.0004893964110929853 0.0010257456872895447 ['ENSG00000161057|ENST00000292644|PSMC2', 'ENST00000460021.1_1_7:102994369-103002536:+|nuORF'] 14944 11510 DYETATLSEIK True NCI_RA007_Epitope_Rep1 1268.61361251008 1268.61250993586 48.737 2 0.19688904948620872 0.0004893964110929853 0.0010258407258677 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 132814 19797 VVLEEIPKL True PC9_epitope_Rep5 1038.6324974798597 1038.6314099358601 81.194 2 0.1968770716801472 0.0004893964110929853 0.0010261237988631873 ['ENSG00000116266|ENST00000370008|STXBP3', 'STXBP3|p.G375Wfs*3|1|0.32|ENSG00000116266|chr1:108796243-108796244|-/T|frameshift_variant'] 40864 5468 HSERHVLLY True H1975_Epitope_Rep2 1152.60399131624 1152.60235490379 26.06 3 0.19686980588752676 0.0004893964110929853 0.0010262955504211585 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 84271 22392 PYNPLWAQL True PC9_epitope_Rep1 1100.5654805492 1100.5643899358602 90.949 2 0.19685505945656084 0.0004893964110929853 0.0010266442207749003 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 40516 5644 HRDYETATL True PC9_epitope_Rep2 1104.51998690876 1104.5188899358602 27.093 2 0.196853817651562 0.0004893964110929853 0.0010266735879178813 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 62466 16989 LLIDDKGTIKL True PC9_epitope_Rep4 1227.74383883399 1227.74218490379 73.339 3 0.1968464897379265 0.0004893964110929853 0.0010268469011101944 ['ENSG00000170312|ENST00000395284|CDK1'] 96238 9239 RYQDIIHSI True NCI_RA007_Epitope_Rep3 1143.6036569630699 1143.60254993586 43.441 2 0.19684417521329978 0.0004893964110929853 0.0010269016482520067 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 118010 18355 TYDYNFHSF True PC9_epitope_Rep3 1192.48253877088 1192.4814499358602 75.814 2 0.19683875393031613 0.0004893964110929853 0.0010270298932764622 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 29310 15275 FVDDYTVRV True PC9_epitope_Rep4 1112.55022440788 1112.54912993586 66.684 2 0.1968253417438505 0.0004893964110929853 0.001027347238889224 ['ENSG00000115233|ENST00000409682|PSMD14'] 28617 9111 FSHYMEENL True NCI_RA007_Epitope_Rep3 1168.4859098991599 1168.48480993586 42.924 2 0.19682014472924225 0.0004893964110929853 0.0010274702318325008 ['ENSG00000145632|ENST00000274289|PLK2'] 11056 14222 DAVLLVFANK True H1975_Epitope_Rep3 1088.62299542532 1088.62188993586 60.045 2 0.1967993731582516 0.0004893964110929853 0.0010279619608776346 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 49909 18384 KIIGAVDQIQL True PC9_epitope_Rep4 1196.71287305888 1196.71176993586 78.78 2 0.19678838644856933 0.0004893964110929853 0.0010282221465996583 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 108384 18957 SYLERHGLINF True PC9_epitope_Rep5 1347.6935345966297 1347.6924299358602 77.943 2 0.1967817169529232 0.0004893964110929853 0.0010283801248744695 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 77021 20482 NRIDILDSALL True PC9_epitope_Rep4 1241.69795127073 1241.6968499358602 86.932 2 0.1967815315860802 0.0004893964110929853 0.0010283845159490144 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 23829 17244 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.6640899358601 74.337 2 0.1967778490505323 0.0004893964110929853 0.001028471753829537 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 32649 8710 GGNFGFGDSR True PC9_epitope_Rep6 1012.4362572847999 1012.43516993586 43.359 2 0.19677415129984183 0.0004893964110929853 0.0010285593596182138 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 31320 11253 GDLGIEIPAEK True NCI_RA007_Epitope_Rep1 1140.60265390356 1140.60154993586 47.766 2 0.19676717203515548 0.0004893964110929853 0.0010287247302560973 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 107537 16276 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 70.561 2 0.19676284563254265 0.0004893964110929853 0.0010288272558687042 ['ENSG00000073756|ENST00000367468|PTGS2'] 15002 14234 DYKESFNTI True PC9_epitope_Rep4 1115.5135045459901 1115.5124099358602 62.658 2 0.1967474690362551 0.0004893964110929853 0.0010291917281322952 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 96050 11528 RYLQTLTTI True NCI_RA007_Epitope_Rep4 1107.62880908175 1107.6277099358601 51.29 2 0.19674402774564628 0.0004893964110929853 0.0010292733149527553 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 27875 13818 FQDPYTRSL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 58.433 2 0.1967355009782422 0.0004893964110929853 0.001029475497240859 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 25646 4508 FEQAGEPRQP True H1975_Epitope_Rep3 1157.5465360097699 1157.54542993586 22.459 2 0.19673419011958795 0.0004893964110929853 0.0010295065831734378 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 8360 17616 ATLKELTSL True PC9_epitope_Rep1 974.56481184286 974.56370993586 72.552 2 0.1967321709527386 0.0004893964110929853 0.0010295544678927213 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 24297 21343 EYTRALFLL True PC9_epitope_Rep3 1124.62299542532 1124.62188993586 87.393 2 0.19673216408105873 0.0004893964110929853 0.001029554630859026 ['ENSG00000129933|ENST00000262815|MAU2'] 140206 11593 YQVDSRTYL True PC9_epitope_Rep6 1143.5560380643099 1143.5549499358601 55.708 2 0.19671799145199662 0.0004893964110929853 0.0010298907989183125 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000513152.1_1_5:40764586-40764871:-|nuORF'] 66050 8730 LSEGVTISYK True NCI_RA007_Epitope_Rep1 1095.58119018299 1095.58008993586 37.959 2 0.19671268628394373 0.0004893964110929853 0.0010300166633067692 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 2931 7386 AEYVVQQEGA True H1975_Epitope_Rep3 1092.50875351872 1092.50817496793 33.388 1 0.1967100769288035 0.0004893964110929853 0.0010300785755606766 ['ENSG00000197601|ENST00000354817|FAR1', 'ENST00000524933.1_1_11:13716477-13732426:+|nuORF'] 62023 20925 LLDRFLATV True PC9_epitope_Rep1 1046.61243074162 1046.61132993586 85.309 2 0.19670876435650456 0.0004893964110929853 0.001030109720416846 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 2306 5747 AEPAKIEAFR True NCI_RA007_Epitope_Rep5 1130.6084079903399 1130.6067749037902 28.794 3 0.19669366388831477 0.0004893964110929853 0.0010304680938746785 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 68164 8266 LTDRELEEY True H1975_Epitope_Rep3 1166.54553295026 1166.54442993586 36.781 2 0.19668728452727166 0.0004893964110929853 0.0010306195302988608 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 142174 7947 YVTIIDAPGHR True NCI_RA007_Epitope_Rep1 1240.6564208119198 1240.65478490379 34.904 3 0.19668432419127432 0.0004893964110929853 0.0010306898117981556 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 7549 7115 ASEFPGAQHY True H1975_Epitope_Rep2 1105.48287312405 1105.48176993586 32.3 2 0.19668189986093576 0.0004893964110929853 0.0010307473715372912 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 45489 15036 IQLVEEELDR True PC9_epitope_Rep4 1242.6455813446998 1242.64448993586 65.767 2 0.196668603629946 0.0004893964110929853 0.0010310631150434412 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 40857 11091 HSELLEDYY True H1975_Epitope_Rep1 1167.50841916555 1167.50732993586 47.625 2 0.19666194770613346 0.0004893964110929853 0.0010312212086459513 ['ENSG00000117528|ENST00000370214|ABCD3'] 23855 18938 EYIPKWEQF True PC9_epitope_Rep4 1238.5971746003 1238.5960699358602 80.932 2 0.19665016355956672 0.0004893964110929853 0.0010315011690326945 ['ENSG00000114405|ENST00000462069|C3orf14'] 90145 6266 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 29.111 2 0.19664633875111245 0.0004893964110929853 0.0010315920528233518 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 9200 12481 AVLYQPLFDK True NCI_RA007_Epitope_Rep5 1192.6492101731599 1192.64810993586 54.665 2 0.1966428931555388 0.0004893964110929853 0.0010316739327624375 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 107497 2981 SVNGKVLSK True NCI_RA007_Epitope_Rep4 930.5498304850599 930.54872993586 16.687 2 0.1966355510779518 0.0004893964110929853 0.0010318484290897322 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 58049 8102 LEIIGNSKNVA True H1975_Epitope_Rep1 1156.64518742188 1156.6440899358602 36.111 2 0.19663230089502917 0.0004893964110929853 0.0010319256843847014 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 125259 15137 VILEGELERA True PC9_epitope_Rep5 1127.6186383208699 1127.61754993586 63.23 2 0.196631061424443 0.0004893964110929853 0.0010319551475359925 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 54687 20840 KYLTEGLLQF True PC9_epitope_Rep2 1210.65977485686 1210.6586699358602 85.607 2 0.19663099174509838 0.0004893964110929853 0.0010319568038916482 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 29715 21486 FVMETFVHL True PC9_epitope_Rep1 1121.55795264061 1121.55684993586 87.489 2 0.19663095892785562 0.0004893964110929853 0.0010319575839949947 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 99058 8425 SHGDVIRPL True PC9_epitope_Rep5 992.5403284305199 992.53922993586 37.347 2 0.196628810972743 0.0004893964110929853 0.0010320086446276647 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 31664 10202 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 44.182 2 0.1966228042116576 0.0004893964110929853 0.0010321514492460193 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 21193 10719 ERDMSNVSL True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 46.185 2 0.19661371321790427 0.0004893964110929853 0.0010323676160412477 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 95790 19473 RYIFAKNLF True PC9_epitope_Rep5 1170.6549642599398 1170.65332490379 79.956 3 0.19661352815276734 0.0004893964110929853 0.0010323720170148658 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 68203 5108 LTDTPKATSY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 24.727 2 0.19659922264598836 0.0004893964110929853 0.0010327122685442303 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 48982 7661 KEFENPEVP True H1975_Epitope_Rep2 1087.51858992643 1087.51748993586 34.423 2 0.19659374335821456 0.0004893964110929853 0.001032842621291006 ['ENSG00000164754|ENST00000297338|RAD21'] 72927 14453 MPWGDPNYRSA True PC9_epitope_Rep2 1292.5608061749201 1292.5597099358602 60.863 2 0.19658912570109632 0.0004893964110929853 0.0010329524885789206 ['ENSG00000124226|ENST00000244061|RNF114'] 2081 4648 AELEGREQVA True H1975_Epitope_Rep2 1100.5462016565998 1100.5451099358602 22.977 2 0.19658315332254664 0.0004893964110929853 0.0010330946059512482 ['ENSG00000169871|ENST00000306085|TRIM56'] 40226 12983 HQIEAVDGEEL True PC9_epitope_Rep1 1238.5778957076998 1238.57678993586 54.81 2 0.19657740374814842 0.0004893964110929853 0.001033231440050295 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 117075 22008 TVIQFLERI True PC9_epitope_Rep1 1117.64954452633 1117.64844993586 89.477 2 0.19657585254921345 0.0004893964110929853 0.0010332683601408114 ['ENSG00000142207|ENST00000382751|URB1'] 52693 7439 KLYDIDVAK True NCI_RA007_Epitope_Rep4 1063.5913609438699 1063.59026993586 35.258 2 0.19656694683479795 0.0004893964110929853 0.0010334803506782092 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF'] 137518 7642 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 34.346 2 0.196557520853729 0.0004893964110929853 0.0010337047730904596 ['ENSG00000127184|ENST00000247655|COX7C'] 98309 9380 SEVQYIQEA True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 41.043 2 0.19653262410919475 0.0004893964110929853 0.0010342977726805593 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 93396 4603 RQAPQPQSSL True NCI_RA007_Epitope_Rep4 1110.57817049122 1110.5770699358602 24.118 2 0.1965312680438488 0.0004893964110929853 0.0010343300817258806 ['ENSG00000143614|ENST00000368655|GATAD2B'] 77829 5548 NVDISAPK True NCI_RA007_Epitope_Rep1 842.4497820906199 842.44868993586 25.65 2 0.19653109628023505 0.0004893964110929853 0.0010343341741660616 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 14332 4575 DSYVGDEAQSK True NCI_RA007_Epitope_Rep2 1197.51496109797 1197.5138699358602 22.422 2 0.19652376574567595 0.0004893964110929853 0.00103450884663091 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 75601 13685 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.5015099358602 57.782 2 0.1965208917637566 0.0004893964110929853 0.0010345773361347488 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 10086 15132 AYTLLLHTW True NCI_RA007_Epitope_Rep5 1116.59678067748 1116.59568993586 64.872 2 0.19652026850865972 0.0004893964110929853 0.0010345921894489903 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 54838 16526 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 71.631 2 0.1965198823980243 0.0004893964110929853 0.0010346013912822163 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 125986 13514 VLDPYLLKY True H1975_Epitope_Rep1 1122.63249747986 1122.6314099358601 57.102 2 0.1965183142634783 0.0004893964110929853 0.0010346387640892357 ['ENSG00000239789|ENST00000285298|MRPS17'] 48070 23236 IYMDTLNIF True PC9_epitope_Rep5 1128.5525329069999 1128.5514299358601 94.361 2 0.1965180564976332 0.0004893964110929853 0.0010346449074628168 ['ENSG00000165678|ENST00000372134|GHITM'] 134744 18684 VYTSKSDVWSF True PC9_epitope_Rep2 1317.62411762413 1317.6230299358601 77.236 2 0.19651110257334092 0.0004893964110929853 0.0010348106552301108 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 140781 5371 YSDINQEHV True H1975_Epitope_Rep3 1103.48835242731 1103.48724993586 25.726 2 0.19649562036425017 0.0004893964110929853 0.0010351797715084314 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644'] 54785 19422 KYNDTFWKEF True PC9_epitope_Rep5 1376.6401020414398 1376.63845490379 79.755 3 0.19649532110182472 0.0004893964110929853 0.0010351869076197925 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 68172 6590 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 30.26 2 0.19649158546577108 0.0004893964110929853 0.001035275990494784 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 116312 5367 TTEERTQLY True H1975_Epitope_Rep2 1139.54586730343 1139.5447699358601 25.684 2 0.19648726551487317 0.0004893964110929853 0.0010353790169799384 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 85062 9199 QEISHLIEP True NCI_RA007_Epitope_Rep3 1064.55022440788 1064.54912993586 43.278 2 0.19648651976493864 0.0004893964110929853 0.0010353968034066206 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 86033 12196 QHQLIQEAL True PC9_epitope_Rep4 1078.5771078620598 1078.5760099358602 54.73 2 0.19648402961637712 0.0004893964110929853 0.0010354561966403526 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 7873 8283 ATAEDFNKV True PC9_epitope_Rep5 993.47672511445 993.47562993586 36.799 2 0.19648124897407054 0.0004893964110929853 0.0010355225225596588 ['nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 49070 10769 KEIDYILST True H1975_Epitope_Rep2 1080.5702911461199 1080.56918993586 46.453 2 0.1964755050476965 0.0004893964110929853 0.0010356595443936 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 93362 10608 RPYQPLPEA True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 45.749 2 0.19647522193400552 0.0004893964110929853 0.0010356662985640216 ['ENSG00000165476|ENST00000373758|REEP3'] 55038 7848 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 36.885 2 0.19647348101305206 0.0004893964110929853 0.0010357078322378263 ['ENSG00000143546|ENST00000368733|S100A8'] 17968 9335 EIDGGLETLR True H1975_Epitope_Rep3 1101.56660274801 1101.56550993586 40.905 2 0.1964722662308448 0.0004893964110929853 0.00103573681465099 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB', 'ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 8035 5798 ATDMPVKNQY True H1975_Epitope_Rep2 1165.54375912845 1165.5426699358602 27.291 2 0.19645611355912604 0.0004893964110929853 0.0010361222642563475 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 31961 5949 GEPPKDYRIP True H1975_Epitope_Rep2 1170.6033226098998 1170.60166490379 27.865 3 0.19645530713695183 0.0004893964110929853 0.0010361415115983782 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 118192 19651 TYKDYVDLF True PC9_epitope_Rep4 1162.55464108198 1162.55354993586 83.705 2 0.19644718666364439 0.0004893964110929853 0.001036335347591582 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 104001 14116 SQDARFYAL True PC9_epitope_Rep4 1069.51925863277 1069.5181699358602 62.203 2 0.1964332421193648 0.0004893964110929853 0.0010366682892095982 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 28820 20436 FSWEGAFQHV True PC9_epitope_Rep2 1206.54580773378 1206.54470993586 84.034 2 0.19643076511792162 0.0004893964110929853 0.0010367274416120933 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 48017 13594 IYLLIHNNF True NCI_RA007_Epitope_Rep3 1145.62332977849 1145.62222993586 60.768 2 0.19642740565727854 0.0004893964110929853 0.001036807673121376 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 130998 10241 VTDPSTLEQY True H1975_Epitope_Rep2 1151.53463391339 1151.53352993586 44.397 2 0.19641846297562704 0.0004893964110929853 0.0010370212749091952 ['ENSG00000197081|ENST00000356956|IGF2R'] 55281 8241 LADSDARALY True H1975_Epitope_Rep2 1093.54038800017 1093.53928993586 36.652 2 0.1964166216090838 0.0004893964110929853 0.0010370652626292766 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 53661 9921 KSDLFFHDY True H1975_Epitope_Rep1 1170.53457434374 1170.53346993586 43.096 2 0.1964105504116462 0.0004893964110929853 0.001037210308460441 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 71916 6405 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep1 1282.5975859869 1282.59648993586 29.696 2 0.19640654046073264 0.0004893964110929853 0.001037306120595451 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 28821 20729 FSWEGAFQHV True PC9_epitope_Rep3 1206.54580773378 1206.54470993586 85.002 2 0.1964048511337656 0.0004893964110929853 0.0010373464873434748 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 142846 19963 YYTDIMHTL True PC9_epitope_Rep3 1155.5270464351497 1155.5259499358601 82.033 2 0.19640446906275777 0.0004893964110929853 0.0010373556172119888 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 135438 12321 WHSDDEPSL True PC9_epitope_Rep1 1084.44615326216 1084.4450499358602 52.248 2 0.1964015894303999 0.0004893964110929853 0.0010374244307432424 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 77103 14535 NRLTFASTL True PC9_epitope_Rep4 1021.55564414149 1021.55454993586 63.823 2 0.19639402052946106 0.0004893964110929853 0.0010376053238557465 ['ENSG00000047315|ENST00000314595|POLR2B'] 16864 6008 EFFNGKEPSR True NCI_RA007_Epitope_Rep1 1209.5778361380496 1209.57619490379 27.415 3 0.19639275222817193 0.0004893964110929853 0.001037635638743952 ['ENSG00000044574|ENST00000324460|HSPA5'] 45473 19881 IQLPSEKAIFL True PC9_epitope_Rep4 1257.7332741502898 1257.7321699358602 84.605 2 0.19639238921767663 0.0004893964110929853 0.001037644315570207 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 73825 18859 NALDKVLSV True PC9_epitope_Rep5 957.54949613189 957.54838993586 77.558 2 0.19638070264826074 0.0004893964110929853 0.001037923691640906 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 142553 13276 YYLNDLERI True NCI_RA007_Epitope_Rep4 1197.6029882567298 1197.60188993586 58.201 2 0.19637883601855735 0.0004893964110929853 0.0010379683217877677 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 128542 4972 VPSYPSKSA True PC9_epitope_Rep3 934.47599683846 934.47488993586 24.218 2 0.19637691247249794 0.0004893964110929853 0.0010380143147884799 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 90863 9741 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 42.455 3 0.1963656609949124 0.0004893964110929853 0.0010382833844929274 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 1093 19569 AEALPLPLLP True H1975_Epitope_Rep1 1032.6219327961599 1032.62082993586 81.477 2 0.1963590371540239 0.0004893964110929853 0.0010384418208310116 ['ENST00000256190.12_1_11:10315695-10315752:-|nuORF'] 115830 9091 TSDTLNNVGY True H1975_Epitope_Rep1 1082.48801807414 1082.4869299358602 39.872 2 0.19634814348443105 0.0004893964110929853 0.0010387024403698975 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 68163 8458 LTDRELEEY True H1975_Epitope_Rep3 1166.54553295026 1166.54442993586 37.518 2 0.19634770164888582 0.0004893964110929853 0.0010387130122026184 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 134686 11269 VYTGIDHHW True PC9_epitope_Rep1 1126.51959298594 1126.51795490379 48.226 3 0.19634436005267086 0.0004893964110929853 0.001038792970323531 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 75893 10613 NLQTDLSDGLR True H1975_Epitope_Rep1 1230.62042922602 1230.6193299358602 45.777 2 0.19633930772160005 0.0004893964110929853 0.0010389138748372235 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 137232 16031 YAYTGVLQL True H1975_Epitope_Rep2 1026.53859709502 1026.53807496793 66.861 1 0.1963389667872496 0.0004893964110929853 0.0010389220340550167 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 87002 17259 QMISRIEYI True PC9_epitope_Rep2 1151.60088008175 1151.5997899358601 71.647 2 0.1963387884698879 0.0004893964110929853 0.001038926301559638 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 27866 21029 FQDPVPLTV True PC9_epitope_Rep3 1014.5385970950199 1014.53807496793 86.166 1 0.19633498142050798 0.0004893964110929853 0.0010390174163480376 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 93432 12934 RQFSTPFQL True NCI_RA007_Epitope_Rep5 1122.5821932425 1122.58108993586 56.432 2 0.1963330858340527 0.0004893964110929853 0.0010390627867432405 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 87385 7693 QPTSVLDKATA True PC9_epitope_Rep4 1129.59790287629 1129.5968099358602 36.973 2 0.1963136986136493 0.0004893964110929853 0.0010395269291731488 ['ENSG00000165507|ENST00000298295|DEPP1'] 125163 10389 VIHDNFGIVEG True H1975_Epitope_Rep1 1198.59823722946 1198.5971499358602 44.91 2 0.19631199822504752 0.0004893964110929853 0.001039567647477232 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 75031 20716 NHSFMPIVL True PC9_epitope_Rep3 1056.54263692964 1056.5415299358601 84.958 2 0.19630555020096946 0.0004893964110929853 0.0010397220694227745 ['ENSG00000198712|ENST00000361739|MT-CO2'] 86002 11922 QHLQATGVSL True PC9_epitope_Rep3 1052.56145779792 1052.56036993586 50.879 2 0.19628790916996333 0.0004893964110929853 0.0010401446671591118 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 127586 4576 VNTLIRPDGEK True NCI_RA007_Epitope_Rep5 1240.6775501793197 1240.67590490379 24.261 3 0.19627928121861252 0.0004893964110929853 0.0010403514157957502 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 17720 12287 EHQAVLQSL True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 52.115 2 0.19626226052706477 0.0004893964110929853 0.0010407593976284597 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 114708 15122 TQIDHYVGI True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 63.173 2 0.19626051332632982 0.0004893964110929853 0.0010408012866835955 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 35497 5179 GSNGYILNK True NCI_RA007_Epitope_Rep3 964.4977949122 964.49668993586 27.363 2 0.19625953034750346 0.0004893964110929853 0.0010408248542977002 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1', 'EHMT1|p.Y479Qfs*86|1|0.08|ENSG00000181090|chr9:137757939-137757940|-/CAGGG|frameshift_variant', 'nc|ENSG00000181090|Q9H9B1-4|EHMT1', 'ENST00000371394.6_1_9:140611085-140686569:+|nuORF'] 20046 13906 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 58.636 2 0.19625868735905477 0.0004893964110929853 0.001040845065969524 ['ENSG00000182195|ENST00000370526|LDOC1'] 72082 5810 MEVKPSSVTA True H1975_Epitope_Rep2 1047.52704643515 1047.5259499358601 27.339 2 0.19625643786375238 0.0004893964110929853 0.0010408990022777508 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 95797 21653 RYILEPFFI True PC9_epitope_Rep4 1196.65938093404 1196.65828993586 91.48 2 0.19623690436716376 0.0004893964110929853 0.0010413674761617776 ['ENSG00000151012|ENST00000280612|SLC7A11'] 104266 16874 SQIEADFRL True PC9_epitope_Rep5 1077.54547338061 1077.54436993586 69.916 2 0.19623535798875932 0.0004893964110929853 0.0010414045721465024 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 31998 5610 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 26.617 2 0.19623477010425078 0.0004893964110929853 0.0010414186752226134 ['ENSG00000108344|ENST00000264639|PSMD3'] 140006 5168 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54542993586 24.732 2 0.19623248659008174 0.0004893964110929853 0.0010414734574829372 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 116749 13868 TVDNVQPLLY True H1975_Epitope_Rep3 1160.607739284 1160.60664993586 58.652 2 0.1962154201772947 0.0004893964110929853 0.001041882977887038 ['ENSG00000145332|ENST00000273963|KLHL8'] 77031 20091 NRIQDLLEL True PC9_epitope_Rep4 1112.61897267404 1112.6178699358602 85.412 2 0.19620419225601118 0.0004893964110929853 0.001042152487699885 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 44159 18663 IITDLLRSV True PC9_epitope_Rep6 1028.62299542532 1028.62188993586 84.43 2 0.19619937809733287 0.0004893964110929853 0.0010422680659436072 ['ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1'] 90696 7288 REQLVDVQA True H1975_Epitope_Rep2 1056.55637241748 1056.55526993586 32.971 2 0.19619776358693097 0.0004893964110929853 0.0010423068299613484 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000488706.1_1_10:71007290-71008567:+|nuORF', 'nc|ENSG00000156510|Q2TB90-3|HKDC1'] 14754 22320 DVNFEFPEFQL True NCI_RA007_Epitope_Rep1 1383.63468230783 1383.63358993586 91.439 2 0.19617945293618413 0.0004893964110929853 0.0010427465655992953 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 77424 13739 NSLESYAFNM[Oxidation]K True PC9_epitope_Rep2 1318.5863525968596 1318.58524993586 58.135 2 0.1961770069661778 0.0004893964110929853 0.001042805320368561 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 138578 10009 YIDEQFERY True H1975_Epitope_Rep3 1261.5615173675699 1261.5604299358602 43.538 2 0.19617690780074884 0.0004893964110929853 0.0010428077024963714 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 18102 15335 EIIDLVLDR True NCI_RA007_Epitope_Rep2 1084.61282466444 1084.61172993586 64.346 2 0.1961740986036078 0.0004893964110929853 0.001042875186613522 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 22349 3457 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 18.176 2 0.19616661590839782 0.0004893964110929853 0.0010430549615043233 ['ENSG00000100347|ENST00000350028|SAMM50'] 44168 17591 IITKDLFQV True PC9_epitope_Rep6 1075.62774645259 1075.62664993586 80.306 2 0.19615803131852905 0.0004893964110929853 0.0010432612481547695 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 92116 7203 RLATFFPRK True NCI_RA007_Epitope_Rep4 1134.6661976499797 1134.66454490379 34.335 3 0.19615525648865867 0.0004893964110929853 0.0010433279357278313 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 48338 20892 IYSIDFTRF True PC9_epitope_Rep2 1160.5866099165999 1160.58550993586 85.804 2 0.1961501177616129 0.0004893964110929853 0.0010434514462041244 ['ENSG00000175970|ENST00000344651|UNC119B'] 72929 15288 MPWGDPNYRSA True PC9_epitope_Rep3 1292.5608061749201 1292.5597099358602 63.956 2 0.1961444948272695 0.0004893964110929853 0.0010435866115127007 ['ENSG00000124226|ENST00000244061|RNF114'] 14441 12854 DTEFPNFKY True H1975_Epitope_Rep1 1159.51858992643 1159.51748993586 54.512 2 0.1961256798318916 0.0004893964110929853 0.0010440390181093479 ['ENSG00000132383|ENST00000254719|RPA1'] 54250 11781 KWNPTAGVAF True NCI_RA007_Epitope_Rep5 1089.56072952193 1089.5596299358601 51.976 2 0.1960962080706668 0.0004893964110929853 0.001044748061996334 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 37867 15571 GYPLWKVTF True NCI_RA007_Epitope_Rep4 1109.59096702105 1109.5898699358602 67.643 2 0.19609566813439228 0.0004893964110929853 0.0010447610565110432 ['ENSG00000198805|ENST00000361505|PNP'] 9147 8229 AVLDFVKQK True NCI_RA007_Epitope_Rep4 1046.61243074162 1046.61132993586 38.444 2 0.19609390725558576 0.0004893964110929853 0.0010448034362782626 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 75596 13393 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.50207496793 56.626 1 0.19609361486065482 0.0004893964110929853 0.0010448104736296888 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 118525 16196 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.52387496793 67.289 1 0.19608911839003149 0.0004893964110929853 0.0010449187005204172 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 14343 5467 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 25.859 2 0.19608050328924626 0.0004893964110929853 0.0010451260913519338 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 87863 17695 QRIDEFEAL True PC9_epitope_Rep1 1119.5560380643099 1119.5549499358601 72.859 2 0.1960708089285152 0.0004893964110929853 0.0010453595125039551 ['ENSG00000092820|ENST00000367075|EZR'] 141327 8779 YTDSYTDTY True H1975_Epitope_Rep1 1127.42950013851 1127.42897496793 38.699 1 0.19607014949297785 0.0004893964110929853 0.0010453753923144174 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 28449 11789 FSDIHDFEY True H1975_Epitope_Rep1 1171.48220441771 1171.48110993586 50.338 2 0.19607006616726588 0.0004893964110929853 0.0010453773988909365 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.P172Tfs*35|1|0.24|ENSG00000196455|chr3:130744687-130744705|CTTCTGGAAGATAAGTGGG/-|frameshift_variant'] 10063 9837 AYSSYVHQY True PC9_epitope_Rep2 1116.48762415132 1116.48652993586 43.173 2 0.19601413449967797 0.0004893964110929853 0.001046725167901314 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 118270 21160 TYLPAGQSVLL True PC9_epitope_Rep5 1160.64412479272 1160.64302993586 86.445 2 0.19600598806715888 0.0004893964110929853 0.0010469216154231388 ['ENSG00000167085|ENST00000300408|PHB1', 'nc|ENSG00000167085|P35232-2|PHB1'] 90588 8973 REMEENFAVEA True H1975_Epitope_Rep1 1323.57651580871 1323.57540993586 39.419 2 0.1960032822008522 0.0004893964110929853 0.001046986874339904 ['ENSG00000026025|ENST00000544301|VIM'] 106563 5989 STMSTNGIPR True NCI_RA007_Epitope_Rep2 1062.51279335334 1062.5116899358602 27.906 2 0.19599988360779202 0.0004893964110929853 0.0010470688459211202 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 114645 6586 TQDTQPHYI True PC9_epitope_Rep6 1101.50908787189 1101.50798993586 34.037 2 0.19599946531936074 0.0004893964110929853 0.0010470789351772064 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 85840 5070 QHEGGVQEL True PC9_epitope_Rep4 995.46722305991 995.46612993586 26.147 2 0.19599776366447397 0.0004893964110929853 0.0010471199806640508 ['ENSG00000090273|ENST00000321265|NUDC'] 117953 5100 TYAEKLHRL True NCI_RA007_Epitope_Rep4 1129.62439240765 1129.6227449037901 26.123 3 0.19599760883901632 0.0004893964110929853 0.001047123715277102 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 74975 19622 NHQDVAGVFAL True PC9_epitope_Rep3 1169.58292151849 1169.58182993586 80.713 2 0.19599639165257232 0.0004893964110929853 0.0010471530760326549 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 134711 11461 VYTPVASRQSL True PC9_epitope_Rep1 1219.65608645875 1219.6549899358602 48.964 2 0.19598930648427615 0.0004893964110929853 0.0010473239995954801 ['ENSG00000070950|ENST00000264926|RAD18'] 138433 17914 YHISLEHEIL True PC9_epitope_Rep5 1252.64518742188 1252.6435349037902 73.924 3 0.19598844257573234 0.0004893964110929853 0.001047344842556111 ['ENSG00000168002|ENST00000301788|POLR2G'] 54923 16316 KYPSPFFVF True NCI_RA007_Epitope_Rep3 1130.5800679841798 1130.5789699358602 71.879 2 0.19598776187519784 0.0004893964110929853 0.001047361265669021 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 130089 9086 VSDLLHQY True H1975_Epitope_Rep3 973.4868958753302 973.48578993586 39.937 2 0.19598560723804057 0.0004893964110929853 0.001047413251830868 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 29032 12965 FTEQWTDGY True H1975_Epitope_Rep3 1145.4665543535698 1145.46597496793 55.102 1 0.1959785358359494 0.0004893964110929853 0.0010475838857717855 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 65823 6746 LSDKNIEQY True H1975_Epitope_Rep3 1108.540053647 1108.53894993586 30.901 2 0.19597786553017021 0.0004893964110929853 0.001047600061792155 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 94896 10992 RTDYGQVFTY True H1975_Epitope_Rep1 1248.5775017848798 1248.57640993586 47.243 2 0.19597610092357298 0.0004893964110929853 0.0010476426470061235 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 88241 5802 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 27.306 2 0.19597147375815147 0.0004893964110929853 0.001047754322536298 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 27957 9888 FQESSVKEL True PC9_epitope_Rep2 1065.5342399905699 1065.5331499358601 43.367 2 0.19596729441877608 0.0004893964110929853 0.0010478552001522707 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 62175 14021 LLENDVSTLGY True H1975_Epitope_Rep2 1222.60813320682 1222.60702993586 59.081 2 0.1959617277778326 0.0004893964110929853 0.0010479895784910689 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 68032 9234 LTDITKGVQY True H1975_Epitope_Rep3 1136.607739284 1136.60717496793 40.51 1 0.1959537609000496 0.0004893964110929853 0.001048181928450558 ['ENSG00000167658|ENST00000309311|EEF2'] 49962 18786 KILSELFTV True PC9_epitope_Rep6 1048.61684741572 1048.61574993586 84.902 2 0.1959486022353449 0.0004893964110929853 0.0010483064966205242 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 38372 4554 HEISEGNVATA True H1975_Epitope_Rep3 1126.52546621202 1126.52436993586 22.637 2 0.19594838448567772 0.0004893964110929853 0.0010483117550281794 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 45414 9604 IQGALSAY True H1975_Epitope_Rep2 821.42831837005 821.4277649679301 41.917 1 0.19594789595513132 0.0004893964110929853 0.001048323552583389 ['ENSG00000198730|ENST00000361367|CTR9'] 9647 19932 AYDTVRWEF True PC9_epitope_Rep2 1185.5454733806098 1185.54436993586 82.065 2 0.19594694150839848 0.0004893964110929853 0.0010483466019623403 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 95376 4045 RVYGGLTTK True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 21.819 2 0.19594413930459148 0.0004893964110929853 0.0010484142766242932 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 9311 6122 AVQQPFINK True NCI_RA007_Epitope_Rep3 1043.5763795860698 1043.5752899358602 31.069 2 0.19593621424101654 0.0004893964110929853 0.0010486056946977201 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 116253 17480 TTDFIYQLY True H1975_Epitope_Rep2 1162.55464108198 1162.55354993586 72.526 2 0.19591879133728055 0.0004893964110929853 0.001049026642138775 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 24097 19075 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5797699358602 78.402 2 0.19591870225083757 0.0004893964110929853 0.0010490287949541926 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 90689 6973 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 31.743 2 0.19591117294538926 0.0004893964110929853 0.0010492107601408236 ['ENSG00000129250|ENST00000320785|KIF1C'] 115550 6419 TRSITNTTV True PC9_epitope_Rep5 991.52982331647 991.52872993586 29.667 2 0.19590744100730612 0.0004893964110929853 0.0010493009638317796 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 38957 17347 HHIPDVITYL True PC9_epitope_Rep6 1206.63970811862 1206.6386099358601 79.339 2 0.19589147611434993 0.0004893964110929853 0.0010496869348482968 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 40243 21094 HQIPEFDNLYL True PC9_epitope_Rep1 1387.67721582615 1387.67610993586 85.968 2 0.19588449448791037 0.0004893964110929853 0.001049855769035355 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant'] 111091 6899 THDQAVQAL True PC9_epitope_Rep5 981.4879585044899 981.48686993586 31.507 2 0.19588010716089266 0.0004893964110929853 0.0010499618801356352 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 61388 7773 LITLEEEM[Oxidation]TK True H1975_Epitope_Rep1 1221.61625574281 1221.61514993586 34.854 2 0.19587844527745907 0.0004893964110929853 0.001050002076957139 ['ENSG00000185624|ENST00000331483|P4HB'] 137135 17426 YAVDAYFREA True PC9_epitope_Rep2 1203.55603806431 1203.5549499358601 72.283 2 0.19587522829483575 0.0004893964110929853 0.0010500798921400918 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 7039 6053 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep5 935.4348606187698 935.43431496793 29.965 1 0.19587519923202984 0.0004893964110929853 0.0010500805951629592 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 134127 18786 VYLDHAGATLF True PC9_epitope_Rep4 1205.6080736371698 1205.6069699358602 80.345 2 0.19587494631838792 0.0004893964110929853 0.001050086713108126 ['ENSG00000075643|ENST00000261326|MOCOS'] 21687 5763 ERSGVNSEL True PC9_epitope_Rep5 989.47778774361 989.47668993586 27.16 2 0.1958740291175969 0.0004893964110929853 0.0010501089003651701 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 2345 7433 AEPVEVVAPR True NCI_RA007_Epitope_Rep2 1065.5818588893299 1065.5807699358602 33.539 2 0.19587211048601988 0.0004893964110929853 0.0010501553139386551 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 35140 18940 GQWIAETGV True PC9_epitope_Rep5 959.4712458111899 959.4706949679301 77.876 1 0.19586718766634736 0.0004893964110929853 0.0010502744111696913 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 99099 9208 SHHENLVSF True PC9_epitope_Rep2 1068.49885754136 1068.49776993586 40.758 2 0.19585038588859588 0.0004893964110929853 0.0010506809967280274 ['ENSG00000128791|ENST00000262120|TWSG1'] 44039 16996 IIIPEIQKV True PC9_epitope_Rep6 1051.66413196131 1051.66302993586 77.926 2 0.19583892145507975 0.0004893964110929853 0.001050958514690908 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 73062 14949 MRDPTFVRL True PC9_epitope_Rep1 1133.60154878809 1133.59990490379 62.323 3 0.19583788388606077 0.0004893964110929853 0.0010509836346081873 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 57573 6645 LEDSVIRQA True H1975_Epitope_Rep3 1029.5454733806098 1029.54436993586 30.515 2 0.19583096473930128 0.0004893964110929853 0.0010511511650231453 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'PIGG|p.A141S|1|0.16|ENSG00000174227|chr4:505778-505778|G/T|missense_variant', 'nc|ENSG00000174227|Q5H8A4-5|PIGG', 'nc|ENSG00000174227|Q5H8A4-6|PIGG'] 49247 10153 KEQDHIIIIP True H1975_Epitope_Rep2 1204.6815729306 1204.67992490379 44.053 3 0.19582047471958303 0.0004893964110929853 0.0010514052065731653 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 137529 6842 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 31.275 2 0.19581770200637394 0.0004893964110929853 0.0010514723649092592 ['ENSG00000127184|ENST00000247655|COX7C'] 30049 19201 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6171499358602 78.652 2 0.19580432134140716 0.0004893964110929853 0.0010517965206388344 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 108733 19184 SYRQVAFDF True PC9_epitope_Rep1 1131.5349086969097 1131.53380993586 78.586 2 0.1957980097724702 0.0004893964110929853 0.0010519494574792205 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 111534 19325 TIAEIKNLF True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 82.441 2 0.19579764071590555 0.0004893964110929853 0.001051958400849848 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 105701 12319 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 52.469 2 0.19579403655069524 0.0004893964110929853 0.0010520457448172484 ['ENSG00000115758|ENST00000234111|ODC1'] 134546 10402 VYRQDCETF True PC9_epitope_Rep5 1159.4968089360298 1159.49570993586 44.997 2 0.19579012320198116 0.0004893964110929853 0.001052140589826399 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1'] 40337 13308 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5439899358599 56.201 2 0.19578902748594978 0.0004893964110929853 0.001052167147441697 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 32040 12917 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.4912699358601 54.914 2 0.19577918945752507 0.0004893964110929853 0.0010524056285487699 ['ENSG00000051523|ENST00000261623|CYBA'] 120891 4844 VENIQRVAA True NCI_RA007_Epitope_Rep3 998.5508931142198 998.54978993586 26.039 2 0.19576651372208909 0.0004893964110929853 0.0010527129776910765 ['ENSG00000173801|ENST00000393931|JUP'] 87934 19135 QRLETILSL True PC9_epitope_Rep4 1071.62880908175 1071.6277099358601 81.697 2 0.19576245161634662 0.0004893964110929853 0.0010528114907993815 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 6690 10728 AQAEVYKEL True PC9_epitope_Rep5 1049.53932537101 1049.53822993586 46.258 2 0.195741560629343 0.0004893964110929853 0.0010533182795073018 ['ENSG00000169710|ENST00000306749|FASN'] 135407 16673 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.5550749037902 68.962 3 0.19573446424716281 0.0004893964110929853 0.0010534904843470514 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 62114 6962 LLEEHTEEY True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 31.699 2 0.1957307357503121 0.0004893964110929853 0.0010535809734819011 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF'] 115037 15293 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 63.977 2 0.1957161627741366 0.0004893964110929853 0.0010539347285867416 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 138449 18592 YHLDSSGSYVF True PC9_epitope_Rep5 1273.5615173675699 1273.5604299358602 76.539 2 0.19571496576707706 0.0004893964110929853 0.0010539637909064109 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 96104 9310 RYMPQNPHI True PC9_epitope_Rep5 1154.5654976325397 1154.5638449037901 40.763 3 0.19571315498388994 0.0004893964110929853 0.0010540077567190525 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 14767 7185 DVNQQEFVR True NCI_RA007_Epitope_Rep2 1133.5465360097699 1133.54542993586 32.568 2 0.1957128374133805 0.0004893964110929853 0.0010540154675200205 ['ENSG00000105372|ENST00000598742|RPS19'] 29688 22670 FVLPELPSV True PC9_epitope_Rep2 999.56408356687 999.56298993586 92.695 2 0.19571184875540756 0.0004893964110929853 0.0010540394730861693 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 36665 12906 GVIGQDGLLFK True NCI_RA007_Epitope_Rep5 1145.6444591458899 1145.6433699358602 56.325 2 0.19570302664638387 0.0004893964110929853 0.0010542537066505803 ['ENSG00000107371|ENST00000327304|EXOSC3', 'ENST00000465860.5_1_9:37781981-37784738:-|nuORF'] 116314 5469 TTEERTQLY True H1975_Epitope_Rep3 1139.54586730343 1139.5447699358601 26.09 2 0.1957021673647199 0.0004893964110929853 0.0010542745755334059 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 45435 9890 IQHSEFEEV True PC9_epitope_Rep2 1116.50875351872 1116.5076499358602 43.375 2 0.1956924814616671 0.0004893964110929853 0.0010545098401805561 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1'] 18837 11879 ELDPMAMTQKY True H1975_Epitope_Rep1 1325.5995597524102 1325.59846993586 50.692 2 0.1956856249129617 0.0004893964110929853 0.0010546764133688375 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 27787 23305 FQAEIAQLMSL True PC9_epitope_Rep1 1249.63765951329 1249.63656993586 94.431 2 0.19568318450194888 0.0004893964110929853 0.0010547357071497164 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 57313 7858 LEAAIAEAEER True NCI_RA007_Epitope_Rep2 1200.59863115228 1200.5975299358602 35.196 2 0.19566765803810396 0.0004893964110929853 0.0010551130263035172 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF'] 90814 6067 RESYDAPPTP True H1975_Epitope_Rep2 1131.5196525555898 1131.5185499358602 28.314 2 0.1956651011986124 0.0004893964110929853 0.0010551751747773254 ['ENSG00000124535|ENST00000380773|WRNIP1', 'nc|ENSG00000124535|Q96S55-2|WRNIP1'] 118024 19834 TYEGIFKTL True PC9_epitope_Rep3 1070.56481184286 1070.56370993586 81.526 2 0.19565809706034828 0.0004893964110929853 0.0010553454414594298 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 46683 9251 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.54912993586 40.575 2 0.19565759237514282 0.0004893964110929853 0.0010553577111384533 ['ENSG00000170348|ENST00000303575|TMED10'] 94967 15221 RTLETLIRL True PC9_epitope_Rep6 1113.6869926642098 1113.6858899358601 70.645 2 0.19564842754863412 0.0004893964110929853 0.0010555805471522534 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 134726 13132 VYTSGIYNI True NCI_RA007_Epitope_Rep5 1028.51786165044 1028.51676993586 57.188 2 0.19564493320317888 0.0004893964110929853 0.0010556655220147937 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 41106 12966 HTVEDLVKV True PC9_epitope_Rep1 1038.5709598524597 1038.5698699358602 54.745 2 0.19564133140839463 0.0004893964110929853 0.0010557531169899065 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 78284 20300 NYIKDLNIL True PC9_epitope_Rep1 1104.61791004488 1104.6168099358601 82.913 2 0.1956331960689382 0.0004893964110929853 0.0010559509937469297 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 48087 11194 IYNGDMEKI True PC9_epitope_Rep2 1081.51139637101 1081.51028993586 48.383 2 0.19563002210443928 0.0004893964110929853 0.001056028204519692 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 93534 15032 RQLESLIRL True PC9_epitope_Rep4 1126.6822416369398 1126.68058490379 65.753 3 0.19560441516984284 0.0004893964110929853 0.0010566513332903543 ['ENSG00000104738|ENST00000649973|MCM4', 'nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 61399 12378 LITPAVVSER True PC9_epitope_Rep2 1083.62880908175 1083.6277099358601 52.922 2 0.19560440581719116 0.0004893964110929853 0.0010566515609486417 ['ENSG00000118181|ENST00000527673|RPS25'] 87754 16358 QRAWTVEQL True PC9_epitope_Rep5 1129.5880068989297 1129.5869099358601 67.918 2 0.1956013212200466 0.0004893964110929853 0.0010567266475891835 ['ENSG00000100442|ENST00000396062|FKBP3'] 108720 20414 SYRELFEFF True PC9_epitope_Rep6 1236.5815245361598 1236.5804299358601 91.226 2 0.1955982782222677 0.0004893964110929853 0.0010568007268421896 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 28452 11757 FSDIHDFEY True H1975_Epitope_Rep3 1171.48220441771 1171.48110993586 50.367 2 0.19559394508578276 0.0004893964110929853 0.001056906222437703 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.P172Tfs*35|1|0.24|ENSG00000196455|chr3:130744687-130744705|CTTCTGGAAGATAAGTGGG/-|frameshift_variant'] 107640 9360 SVQETVLPIK True NCI_RA007_Epitope_Rep4 1112.6441247927198 1112.64302993586 42.858 2 0.19558285399824413 0.0004893964110929853 0.0010571762968655334 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 73584 9308 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep1 1074.57433136118 1074.5732299358601 40.658 2 0.19557927389947877 0.0004893964110929853 0.001057263489125057 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 17431 6757 EHDTTEYKL True PC9_epitope_Rep1 1134.51931820242 1134.51766490379 30.796 3 0.1955787786357133 0.0004893964110929853 0.0010572755516971644 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 42679 6273 IEIIANDQGNR True H1975_Epitope_Rep3 1241.63641364333 1241.63530993586 29.137 2 0.19556406214877345 0.0004893964110929853 0.0010576340472925388 ['HSPA8|p.V26I|1|0.12|ENSG00000109971|chr11:123061249-123061249|C/T|missense_variant'] 44679 14902 ILTDITKGV True PC9_epitope_Rep2 958.5698972233 958.56880993586 62.585 2 0.19554803882515676 0.0004893964110929853 0.0010580245162176774 ['ENSG00000167658|ENST00000309311|EEF2'] 77013 13896 NRHYYSITI True PC9_epitope_Rep5 1165.58800689893 1165.5869099358601 58.471 2 0.19554667334066583 0.0004893964110929853 0.00105805779809906 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 110044 5895 TELDAKTVTA True H1975_Epitope_Rep2 1047.54480467427 1047.54370993586 27.661 2 0.19554626767682384 0.0004893964110929853 0.001058067685821814 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF'] 119137 10299 VAIEHLDKI True PC9_epitope_Rep4 1036.59169529704 1036.5905899358602 47.303 2 0.19554586914625932 0.0004893964110929853 0.0010580773997670232 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 139142 12316 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 52.457 2 0.1955451535110048 0.0004893964110929853 0.0010580948431747094 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 140096 19859 YQLPEILRT True PC9_epitope_Rep5 1131.6288090817498 1131.6277099358601 81.437 2 0.19553723200568737 0.0004893964110929853 0.0010582879468984184 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 85386 4990 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 24.279 2 0.1955328617093821 0.0004893964110929853 0.0010583944973934125 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 96741 3857 SALTDKAIVKK True NCI_RA007_Epitope_Rep4 1172.71287305888 1172.71123490379 21.04 3 0.19549933608195671 0.0004893964110929853 0.0010592122305518765 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 73682 15034 MYPDVFAHF True NCI_RA007_Epitope_Rep3 1125.4953523840497 1125.4942499358601 66.597 2 0.19549658755587906 0.0004893964110929853 0.0010592792987293637 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 140524 15964 YRNDYATML True PC9_epitope_Rep5 1145.51754438061 1145.51644993586 66.395 2 0.1954868447570007 0.0004893964110929853 0.0010595170720050747 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2', 'ENST00000460886.1_1_21:47532344-47532792:+|nuORF'] 7553 7305 ASEFPGAQHY True H1975_Epitope_Rep3 1105.48287312405 1105.48176993586 33.073 2 0.19547545308245773 0.0004893964110929853 0.0010597951540114983 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 128726 8189 VPYEIQKGQA True PC9_epitope_Rep1 1131.59242357303 1131.5913299358601 36.333 2 0.19546761802069854 0.0004893964110929853 0.001059986458072374 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 86150 10344 QIDPTIQRV True PC9_epitope_Rep2 1068.5927579262 1068.5916699358602 45.114 2 0.195458059964849 0.0004893964110929853 0.0010602198783478793 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 18349 7091 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.6049299358601 31.576 2 0.19545017290791095 0.0004893964110929853 0.0010604125294502219 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 24487 7665 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.4923499358601 34.435 2 0.19543190396939292 0.0004893964110929853 0.001060858905664202 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 11733 6314 DHASIQM[Oxidation]NV True PC9_epitope_Rep5 1029.45494450449 1029.45384993586 29.261 2 0.19542488082652512 0.0004893964110929853 0.0010610305565710207 ['ENSG00000171858|ENST00000343986|RPS21'] 23257 6305 EVPAVPETLKK True H1975_Epitope_Rep1 1209.69688864157 1209.6952349037902 29.319 3 0.19542438410174093 0.0004893964110929853 0.0010610426979537626 ['ENSG00000147604|ENST00000352983|RPL7'] 134191 10105 VYLPTHTSL True NCI_RA007_Epitope_Rep1 1029.54949613189 1029.54838993586 43.317 2 0.19542278109603198 0.0004893964110929853 0.0010610818809752229 ['ENSG00000007944|ENST00000356840|MYLIP'] 35258 6411 GRDENSVEL True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 31.753 2 0.19541553727748665 0.0004893964110929853 0.001061258963128539 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 77821 15455 NVDFDAPLGY True H1975_Epitope_Rep1 1109.5029398622898 1109.5023749679299 64.718 1 0.19541335289263592 0.0004893964110929853 0.0010613123683452007 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 77218 15048 NRTFSYTL True PC9_epitope_Rep3 1000.4977949122 1000.49668993586 63.013 2 0.1954035394627255 0.0004893964110929853 0.001061552326512051 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.L175Wfs*55|1|0.48|ENSG00000079999|chr19:10499511-10499511|G/-|frameshift_variant', 'KEAP1|p.F280Sfs*29|1|0.14|ENSG00000079999|chr19:10492039-10492063|CACTTCTGCAGCTGCATCTGCAGGA/-|frameshift_variant', 'KEAP1|p.K323*|1|0.28|ENSG00000079999|chr19:10491935-10491936|-/A|frameshift_variant', 'KEAP1|p.V420Sfs*38|1|0.56|ENSG00000079999|chr19:10491644-10491644|C/-|frameshift_variant', 'KEAP1|p.V123Rfs*31|1|0.28|ENSG00000079999|chr19:10499658-10499667|CAATGGACAC/-|frameshift_variant'] 24856 17105 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 70.619 2 0.19539422235336643 0.0004893964110929853 0.001061780198986001 ['ENSG00000204592|ENST00000376630|HLA-E'] 62471 20917 LLIDELNKL True PC9_epitope_Rep2 1069.63831113629 1069.63720993586 85.903 2 0.19539072739771493 0.0004893964110929853 0.001061865689240836 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 35398 15105 GSDEPAFMYY True H1975_Epitope_Rep3 1178.45902644498 1178.4579299358602 63.5 2 0.19539069645364665 0.0004893964110929853 0.0010618664461957957 ['ENSG00000155096|ENST00000337198|AZIN1'] 133096 6923 VVQEPGQVFK True NCI_RA007_Epitope_Rep3 1129.6131590176099 1129.61206993586 34.333 2 0.19538798310997213 0.0004893964110929853 0.0010619328222146935 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000570007.1_1_16:28117306-28117714:-|nuORF'] 90950 5357 REYQLNDSAA True NCI_RA007_Epitope_Rep3 1165.53636524889 1165.53526993586 28.08 2 0.19538523202524316 0.0004893964110929853 0.0010620001257337628 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 75056 12914 NHTIYINNL True PC9_epitope_Rep4 1100.5614577979202 1100.56036993586 57.559 2 0.19537891135829183 0.0004893964110929853 0.0010621547729903877 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 139602 19544 YLYDLNHTL True PC9_epitope_Rep1 1150.5658744720201 1150.56476993586 80.0 2 0.19537192592446503 0.0004893964110929853 0.0010623257113150603 ['ENSG00000110057|ENST00000227471|UNC93B1'] 70781 13946 LYANMFERL True NCI_RA007_Epitope_Rep4 1155.57466533391 1155.5735699358602 60.919 2 0.19536028770621702 0.0004893964110929853 0.0010626105677139421 ['ENSG00000004478|ENST00000001008|FKBP4'] 112137 19421 TIYKDFVYI True PC9_epitope_Rep4 1160.6117620352798 1160.6106699358602 82.815 2 0.19535788988287933 0.0004893964110929853 0.0010626692662233437 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 104321 8624 SQIQEFKEA True PC9_epitope_Rep1 1078.5294889632999 1078.52838993586 38.01 2 0.19535303778691376 0.0004893964110929853 0.0010627880550628836 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 35468 5713 GSIEINIKK True NCI_RA007_Epitope_Rep4 1000.5916952970399 1000.59058993586 28.589 2 0.1953506315224499 0.0004893964110929853 0.0010628469700822872 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 71311 19752 LYQEVFGRL True PC9_epitope_Rep5 1123.6025943339098 1123.6014899358602 81.022 2 0.1953409839890629 0.0004893964110929853 0.0010630832133406735 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 29035 8964 FTEQYNEQY True H1975_Epitope_Rep1 1220.4985827578398 1220.4974899358601 39.384 2 0.19533824431759855 0.0004893964110929853 0.0010631503104417655 ['ENSG00000173914|ENST00000310046|RBM4B'] 88864 9073 QVDNSLITKY True H1975_Epitope_Rep3 1179.6135529404298 1179.61244993586 39.885 2 0.19533527795602892 0.0004893964110929853 0.0010632229641825207 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 36018 9326 GTYDILVTK True NCI_RA007_Epitope_Rep3 1008.54916177872 1008.54806993586 43.781 2 0.19532987640257932 0.0004893964110929853 0.0010633552747547866 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A'] 139091 8801 YLDESKQLY True H1975_Epitope_Rep3 1157.56045473841 1157.5593499358602 38.859 2 0.1953265576727586 0.0004893964110929853 0.0010634365749355081 ['ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B'] 27827 16630 FQDENHLYL True PC9_epitope_Rep5 1177.54038800017 1177.53928993586 68.973 2 0.1953262135243589 0.0004893964110929853 0.0010634450060258256 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 95240 12754 RVLQALEGLK True PC9_epitope_Rep2 1125.6869926642098 1125.6858899358601 54.363 2 0.19532329384086536 0.0004893964110929853 0.0010635165363402713 ['ENSG00000105372|ENST00000598742|RPS19'] 2504 5767 AEQMASVQNA True H1975_Epitope_Rep3 1047.46550880775 1047.46497496793 27.21 1 0.1953215150319836 0.0004893964110929853 0.0010635601183464401 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 72454 12429 MKTILSNQTVD True PC9_epitope_Rep1 1248.63838778928 1248.63728993586 52.671 2 0.1953197700042683 0.0004893964110929853 0.0010636028744316775 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF'] 40935 4355 HSSQDVHVVLK True NCI_RA007_Epitope_Rep2 1247.6622344683499 1247.66059490379 21.576 3 0.19531319551442805 0.0004893964110929853 0.0010637639758623767 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-6|NSFL1C'] 69310 18675 LTVEERNLLSV True PC9_epitope_Rep2 1271.7085159544301 1271.7074099358601 77.2 2 0.19531299704003652 0.0004893964110929853 0.0010637688396633212 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 54805 14380 KYPDIISRI True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 63.221 2 0.1952922083910379 0.0004893964110929853 0.0010642784085018152 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 140895 11316 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep2 1177.4849072200898 1177.48380993586 48.574 2 0.19529119643187307 0.0004893964110929853 0.0010643032197685388 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 106790 20205 SVADYFKQI True PC9_epitope_Rep5 1069.54441075145 1069.5433099358602 82.765 2 0.1952690713432885 0.0004893964110929853 0.0010648458288209932 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 37828 17008 GYIERPQLI True PC9_epitope_Rep1 1087.6025943339098 1087.6014899358602 70.244 2 0.1952627876851755 0.0004893964110929853 0.001064999983626223 ['nc|ENSG00000164329|Q6PIY7-2|TENT2', 'ENSG00000164329|ENST00000453514|TENT2'] 21491 20170 ERLLGNFSL True PC9_epitope_Rep2 1047.57129420563 1047.57018993586 82.996 2 0.1952590278333283 0.0004893964110929853 0.0010650922334686102 ['ENSG00000151012|ENST00000280612|SLC7A11'] 43730 9251 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 45.735 2 0.19524815602842638 0.0004893964110929853 0.001065359023715324 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 70800 16848 LYAPYSTHF True PC9_epitope_Rep1 1097.51819600361 1097.5170899358602 69.63 2 0.19523836311929454 0.0004893964110929853 0.0010655993956082874 ['ENSG00000013588|ENST00000014914|GPRC5A'] 84360 21266 PYYSKFILI True PC9_epitope_Rep1 1142.6375828603 1142.63648993586 86.625 2 0.19523763522599685 0.0004893964110929853 0.0010656172642875782 ['ENSG00000164815|ENST00000297431|ORC5'] 77117 8616 NRMLAQQAV True PC9_epitope_Rep3 1029.53894853153 1029.53784993586 38.091 2 0.19523386881137034 0.0004893964110929853 0.0010657097288686503 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 54769 16220 KYNANFVTF True PC9_epitope_Rep4 1102.54474510462 1102.54364993586 70.333 2 0.19523273158168158 0.0004893964110929853 0.001065737649167705 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 139417 22279 YLPELLQTV True PC9_epitope_Rep1 1074.5961119711399 1074.5950099358602 90.51 2 0.19522732739457416 0.0004893964110929853 0.0010658703382125686 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 38962 9578 HHIVSIEV True PC9_epitope_Rep4 932.50796567308 932.50686993586 44.463 2 0.19522621475860985 0.0004893964110929853 0.0010658976588277926 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 137568 8866 YEEMGIKPP True H1975_Epitope_Rep3 1062.5055827145798 1062.5044899358602 39.105 2 0.19522597233000166 0.0004893964110929853 0.0010659036117203844 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 69647 6026 LVDQTTGLSR True NCI_RA007_Epitope_Rep1 1088.5825871653199 1088.5814899358602 27.481 2 0.19521541496194253 0.0004893964110929853 0.0010661628827649255 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 106501 19076 STLHLVLRL True PC9_epitope_Rep5 1050.65496425994 1050.65386993586 78.405 2 0.19521331192282096 0.0004893964110929853 0.00106621453739006 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 54497 15445 KYIDQKFVL True PC9_epitope_Rep1 1152.6542955536 1152.65263490379 64.23 3 0.19520773521835452 0.0004893964110929853 0.0010663515239680299 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 138758 6964 YISSDGSY True H1975_Epitope_Rep2 890.3657776831401 890.3652249679301 31.707 1 0.19520574135368265 0.0004893964110929853 0.0010664005056891645 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12', 'nc|ENSG00000164631|P17014-4|ZNF12', 'nc|ENSG00000164631|P17014-5|ZNF12'] 115045 15128 TRDAGYGGLSL True PC9_epitope_Rep5 1108.5512870370399 1108.55018993586 63.195 2 0.19520536086525442 0.0004893964110929853 0.0010664098531085135 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 73348 7568 MTEGSTVNTEY True H1975_Epitope_Rep3 1230.50743318938 1230.50632993586 34.091 2 0.1952052343672611 0.0004893964110929853 0.0010664129607896589 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 7799 11374 ASVAWAVLK True NCI_RA007_Epitope_Rep4 943.5491022090699 943.54800993586 50.663 2 0.1952049349023166 0.0004893964110929853 0.0010664203177928517 ['ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3'] 137567 9057 YEEMGIKPP True H1975_Epitope_Rep2 1062.5055827145798 1062.5044899358602 39.791 2 0.19519765633336905 0.0004893964110929853 0.001066599147212925 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 53232 18944 KQFEPNDFYL True PC9_epitope_Rep4 1299.6135529404298 1299.61244993586 80.955 2 0.19519487951684045 0.0004893964110929853 0.0010666673796045877 ['ENSG00000101126|ENST00000621696|ADNP'] 135087 7963 WEDFKQNTP True H1975_Epitope_Rep2 1163.5247379360299 1163.52364993586 35.577 2 0.1951943301509129 0.0004893964110929853 0.0010666808792329906 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 118240 9423 TYLEKAIKI True NCI_RA007_Epitope_Rep4 1077.6433965167298 1077.6422899358602 43.105 2 0.19519279184136634 0.0004893964110929853 0.0010667186811915295 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 118077 20331 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 83.034 2 0.19519104362825165 0.0004893964110929853 0.0010667616428883897 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 96190 12083 RYPDSHQLF True PC9_epitope_Rep5 1161.55670677065 1161.55560993586 51.471 2 0.19518264057791296 0.0004893964110929853 0.0010669681689867143 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 74506 12103 NFGIGQDIQPK True PC9_epitope_Rep6 1215.62478633047 1215.62368993586 57.89 2 0.19517518729270353 0.0004893964110929853 0.001067151385770899 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 101612 20012 SLLQTLYKV True PC9_epitope_Rep2 1063.62774645259 1063.62664993586 82.38 2 0.19517461288191648 0.0004893964110929853 0.001067165507255992 ['ENSG00000100401|ENST00000356244|RANGAP1'] 82662 22304 PQPDVFPLF True PC9_epitope_Rep4 1058.54368247546 1058.5431749679299 94.031 1 0.19517355538316938 0.0004893964110929853 0.0010671915056087726 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 122439 7659 VGDVTGAQAY True H1975_Epitope_Rep3 979.4610750503098 979.45996993586 34.442 2 0.19517114431865804 0.0004893964110929853 0.0010672507834257154 ['ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000185201|ENST00000616316|IFITM2', 'ENSG00000142089|ENST00000399808|IFITM3'] 75053 14568 NHTIYINNL True PC9_epitope_Rep1 1100.5614577979202 1100.56036993586 60.86 2 0.19516417211628787 0.0004893964110929853 0.001067422218794012 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 7936 3778 ATAQAVAPPR True NCI_RA007_Epitope_Rep4 980.5403284305198 980.53922993586 20.703 2 0.19515637626549573 0.0004893964110929853 0.0010676139390678769 ['ENST00000609438.1_1_4:90171359-90228902:-|nuORF'] 2415 10097 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 43.832 2 0.19515531944322653 0.0004893964110929853 0.0010676399317374428 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 26703 8275 FIVGADNVGSK True NCI_RA007_Epitope_Rep1 1105.57677350889 1105.57566993586 36.188 2 0.1951512343481175 0.0004893964110929853 0.0010677404111056662 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 90554 7052 REM[Oxidation]EENFAV True H1975_Epitope_Rep2 1139.49172393603 1139.4906299358602 32.052 2 0.19515044985621446 0.0004893964110929853 0.0010677597080087802 ['ENSG00000026025|ENST00000544301|VIM'] 91211 14218 RGDLPFVVPR True PC9_epitope_Rep2 1154.6560268890998 1154.65438490379 59.956 3 0.19514834582626053 0.0004893964110929853 0.00106781146458735 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 99851 17695 SILHDVVEV True PC9_epitope_Rep2 1009.54441075145 1009.54330993586 73.344 2 0.1951464537021847 0.0004893964110929853 0.0010678580106873912 ['ENST00000572148.1_1_17:4863453-4863890:-|nuORF', 'ENSG00000091640|ENST00000206020|SPAG7'] 26698 20145 FIVEEIQRI True PC9_epitope_Rep5 1145.6444591458899 1145.6433699358602 82.535 2 0.19512299647729917 0.0004893964110929853 0.0010684352255227506 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 40721 5961 HRTDSEIAL True PC9_epitope_Rep4 1040.5250722892 1040.5239699358601 29.866 2 0.19512171201354991 0.0004893964110929853 0.0010684668415147278 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 9507 5281 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 28.11 2 0.1951193968996467 0.0004893964110929853 0.001068523828460394 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 14327 4561 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.838 2 0.195119247359679 0.0004893964110929853 0.0010685275095184215 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 133943 8829 VYIKHPVSL True PC9_epitope_Rep4 1054.61751612206 1054.61640993586 41.493 2 0.195118944119947 0.0004893964110929853 0.0010685349740705708 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 77907 7378 NVIGEPIDER True H1975_Epitope_Rep1 1140.5775017848798 1140.57640993586 33.383 2 0.19511865658222155 0.0004893964110929853 0.0010685420521502772 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000548647.1_1_12:57037677-57039699:-|nuORF'] 6761 20860 AQDEHLITFF True PC9_epitope_Rep2 1219.58733819259 1219.58624993586 85.683 2 0.19511354277393578 0.0004893964110929853 0.0010686679424170222 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 36860 22319 GVLKVFLENV True PC9_epitope_Rep1 1116.6542955536 1116.6531899358602 90.662 2 0.1951130228496908 0.0004893964110929853 0.0010686807425959836 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 2738 8194 AETEFFSKA True H1975_Epitope_Rep3 1028.48147614172 1028.4803699358602 36.498 2 0.19510694943585877 0.0004893964110929853 0.0010688302772743304 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 136432 19357 WVDPNSPVL True PC9_epitope_Rep4 1025.51819600361 1025.51767496793 82.567 1 0.19510289085399912 0.0004893964110929853 0.001068930216086214 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 115262 15463 TREGETIIEL True PC9_epitope_Rep4 1159.6084675599898 1159.60736993586 67.407 2 0.19508770234816278 0.0004893964110929853 0.0010693043021048822 ['nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 95147 6331 RVFSWSQAK True NCI_RA007_Epitope_Rep5 1107.58252759567 1107.5814299358601 31.029 2 0.1950866025243815 0.0004893964110929853 0.0010693313953631213 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 7998 6988 ATDINGDDY True H1975_Epitope_Rep3 982.3879696796998 982.3874249679301 31.841 1 0.19508521016338498 0.0004893964110929853 0.0010693656960234826 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 140076 20097 YQLDPKFITSI True PC9_epitope_Rep4 1323.7074533252699 1323.70634993586 85.435 2 0.1950794936319629 0.0004893964110929853 0.0010695065337118534 ['ENSG00000119888|ENST00000263735|EPCAM'] 107300 18971 SVLDQKILL True PC9_epitope_Rep4 1027.62774645259 1027.62664993586 81.062 2 0.19507160167913304 0.0004893964110929853 0.0010697009976333618 ['ENSG00000142207|ENST00000382751|URB1'] 29724 9951 FVM[Oxidation]QEEFSR True PC9_epitope_Rep1 1187.5281094447498 1187.5270099358602 43.138 2 0.1950714036683174 0.0004893964110929853 0.0010697058772314528 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 31744 6588 GEHANDYAEIA True H1975_Epitope_Rep2 1188.50473076744 1188.50362993586 30.251 2 0.19506553671421148 0.0004893964110929853 0.0010698504672307318 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 72204 16390 MHAETAFESL True PC9_epitope_Rep1 1134.5015599633 1134.50046993586 67.867 2 0.19506181478402582 0.0004893964110929853 0.0010699422036719516 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 14399 10429 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.5496349037899 45.069 3 0.19505462455300307 0.0004893964110929853 0.0010701194475525907 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 142727 15257 YYQGGKFQF True PC9_epitope_Rep2 1136.52909504048 1136.5279899358602 63.96 2 0.19503647191038834 0.0004893964110929853 0.001070567053032588 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 71007 20146 LYIGWDKHYGF True PC9_epitope_Rep5 1397.67682190333 1397.67572993586 82.539 2 0.1950248747912685 0.0004893964110929853 0.0010708531115540543 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 131115 12218 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.52277496793 52.169 1 0.1950235406841452 0.0004893964110929853 0.0010708860240138212 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 83295 10751 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 46.383 2 0.19501753090917942 0.0004893964110929853 0.001071034297906205 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 78278 19948 NYIGLINRI True PC9_epitope_Rep1 1074.61857875122 1074.61748993586 81.552 2 0.1950132154123436 0.0004893964110929853 0.0010711407830633337 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 87920 8894 QRLAEPSQL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 39.567 2 0.19499836021488542 0.0004893964110929853 0.0010715074171772435 ['ENSG00000173801|ENST00000393931|JUP'] 40312 9520 HQQSIPAVL True NCI_RA007_Epitope_Rep2 991.5450794577898 991.5439899358599 41.645 2 0.19499594988695326 0.0004893964110929853 0.0010715669172073046 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 125929 18572 VLDDKLYVV True PC9_epitope_Rep3 1062.5961119711399 1062.5950099358602 76.662 2 0.19499241827022934 0.0004893964110929853 0.0010716541027396029 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 96111 9826 RYMPQNPHII True PC9_epitope_Rep6 1267.6495616096697 1267.64791490379 48.259 3 0.19498705931311577 0.0004893964110929853 0.0010717864136747328 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 23097 18440 EVIRELAGI True PC9_epitope_Rep3 998.5760452328998 998.57494993586 76.133 2 0.19498381459773256 0.0004893964110929853 0.001071866532620189 ['ENSG00000066654|ENST00000396083|THUMPD1'] 2323 18879 AEPLEIILHLP True H1975_Epitope_Rep2 1243.71762408615 1243.71652993586 78.377 2 0.1949784571015853 0.0004893964110929853 0.0010719988337753708 ['ENSG00000100138|ENST00000401959|SNU13'] 76396 12563 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52838993586 53.632 2 0.19497815674796118 0.0004893964110929853 0.001072006251368832 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 111350 9902 THQDVHLGETL True PC9_epitope_Rep1 1248.6098645423199 1248.60820490379 42.945 3 0.19497678879669286 0.0004893964110929853 0.001072040035219276 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 99372 13174 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep6 1277.7343370957499 1277.7332299358602 62.318 2 0.19497599254298004 0.0004893964110929853 0.0010720597005315113 ['ENSG00000100632|ENST00000557016|ERH'] 40820 7724 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.41397496793 34.662 1 0.19497580309591722 0.0004893964110929853 0.0010720643794146375 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 76799 6149 NRAPNTAEL True PC9_epitope_Rep1 984.4988575413599 984.49776993586 28.467 2 0.19497278191388093 0.0004893964110929853 0.0010721389980530697 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 138408 7619 YHHEAGVTAL True PC9_epitope_Rep5 1096.53015766964 1096.5290699358602 34.254 2 0.1949702732969535 0.0004893964110929853 0.0010722009610642151 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 138266 10004 YHADIYDKV True PC9_epitope_Rep1 1122.53457434374 1122.5329349037902 43.346 3 0.19496978012496344 0.0004893964110929853 0.0010722131428687533 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 54788 13814 KYNLINEYF True NCI_RA007_Epitope_Rep3 1202.5971746003 1202.5960699358602 61.666 2 0.19496974501589653 0.0004893964110929853 0.0010722140101004868 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 108529 13788 SYM[Oxidation]LVNENRF True PC9_epitope_Rep4 1287.59177233047 1287.5906699358602 60.931 2 0.19496909998618359 0.0004893964110929853 0.0010722299431537056 ['ENSG00000182195|ENST00000370526|LDOC1'] 104978 11608 SRDKTIIM[Oxidation]W True PC9_epitope_Rep4 1164.59612943492 1164.59502993586 52.41 2 0.1949687054035071 0.0004893964110929853 0.001072239689964049 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 39498 6473 HLDTLTEHY True H1975_Epitope_Rep3 1127.52473793603 1127.52364993586 29.87 2 0.19496829283826267 0.0004893964110929853 0.0010722498810670075 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 47367 21937 IVHSVFEFL True PC9_epitope_Rep5 1089.58588164061 1089.58478993586 89.422 2 0.19496188278739723 0.0004893964110929853 0.0010724082333216393 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 131035 5120 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 24.77 3 0.19495563556077286 0.0004893964110929853 0.0010725625857726264 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 114962 18055 TQVTALIKL True PC9_epitope_Rep4 985.61718176889 985.61608993586 77.512 2 0.19495155323769894 0.0004893964110929853 0.0010726634612163355 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 114500 6846 TQADWQHRV True PC9_epitope_Rep5 1139.5472047161102 1139.54554490379 31.304 3 0.19494736410342217 0.0004893964110929853 0.0010727669858877084 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF'] 126002 13233 VLDRLTFDY True H1975_Epitope_Rep2 1140.58152453616 1140.5804299358601 56.029 2 0.1949450759635501 0.0004893964110929853 0.00107282353615223 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000338427.10_1_7:44425612-44442312:-|nuORF'] 49935 18388 KILPDLNTV True PC9_epitope_Rep3 1011.59644632431 1011.59534993586 75.937 2 0.19494140100991567 0.0004893964110929853 0.001072914367100714 ['ENSG00000142207|ENST00000382751|URB1'] 59740 14852 LGDLYEEEMR True PC9_epitope_Rep5 1253.5598031154097 1253.5587099358602 62.129 2 0.1949356869116326 0.0004893964110929853 0.0010730556133065478 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 96746 20567 SAMEVVPAL True PC9_epitope_Rep1 915.4735543103099 915.47244993586 83.924 2 0.19493551222510352 0.0004893964110929853 0.0010730599316585523 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 120054 8059 VDSRWQEY True H1975_Epitope_Rep2 1081.4828731240498 1081.48176993586 35.947 2 0.19492760062079312 0.0004893964110929853 0.0010732555293604536 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'MACF1|p.S820Afs*39|1|0.14|ENSG00000127603|chr1:39297705-39297705|C/-|frameshift_variant', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 88671 13502 QTETGTPYMLY True H1975_Epitope_Rep1 1302.5802042068199 1302.57910993586 57.055 2 0.19492732947998903 0.0004893964110929853 0.0010732622333776028 ['ENSG00000167325|ENST00000300738|RRM1'] 86630 15749 QLEWDDSTLSY True H1975_Epitope_Rep2 1355.58812603823 1355.58702993586 65.751 2 0.19490123711741908 0.0004893964110929853 0.00107390756938565 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 38713 17450 HGFAGYFETV True PC9_epitope_Rep6 1126.5083595959 1126.5072699358602 79.74 2 0.19490042867329613 0.0004893964110929853 0.001073927570649585 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 5375 13061 ALSGHLETVIL True NCI_RA007_Epitope_Rep1 1151.65502382959 1151.65392993586 54.796 2 0.19489990401657284 0.0004893964110929853 0.0010739405510880428 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 15307 12554 EAFNMIDQNR True PC9_epitope_Rep2 1236.5557207944798 1236.55462993586 53.597 2 0.19489450892686544 0.0004893964110929853 0.0010740740391680312 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 68029 9316 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60717496793 40.794 1 0.19489256019911672 0.0004893964110929853 0.0010741222596808591 ['ENSG00000167658|ENST00000309311|EEF2'] 88921 20474 QVFPGLLERV True PC9_epitope_Rep3 1156.6604435631998 1156.65934993586 84.011 2 0.19489160056275137 0.0004893964110929853 0.0010741460063084939 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 7653 7631 ASIHEAWTDGK True PC9_epitope_Rep5 1213.57275075761 1213.57111490379 34.299 3 0.19488520711278268 0.0004893964110929853 0.0010743042285025666 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 78210 16099 NYFLWTEKF True NCI_RA007_Epitope_Rep4 1246.60225998074 1246.60116993586 69.821 2 0.19487950601940549 0.0004893964110929853 0.0010744453362818538 ['ENSG00000100351|ENST00000344138|GRAP2'] 28502 10783 FSDYLHPQY True H1975_Epitope_Rep2 1168.5189242796 1168.5178299358602 46.507 2 0.19487321471259114 0.0004893964110929853 0.0010746010740071772 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 49092 10652 KEIEIDIEP True NCI_RA007_Epitope_Rep3 1084.5652057656798 1084.5641099358602 48.947 2 0.19486829384010987 0.0004893964110929853 0.0010747229031862079 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 133542 18754 VWSDVTPLTF True NCI_RA007_Epitope_Rep2 1163.58627556343 1163.5851699358602 77.748 2 0.1948637354151365 0.0004893964110929853 0.001074835771378664 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 7001 21862 AQLQDFDWQV True PC9_epitope_Rep5 1248.57750178488 1248.57640993586 89.128 2 0.1948540192695656 0.0004893964110929853 0.001075076386202451 ['ENSG00000169019|ENST00000381571|COMMD8'] 78264 21040 NYIEFTRIL True PC9_epitope_Rep1 1167.62880908175 1167.6277099358601 85.76 2 0.19485368209057924 0.0004893964110929853 0.001075084737218119 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 116272 11929 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 51.04 2 0.19484696878344843 0.0004893964110929853 0.0010752510213022952 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 38591 13953 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.54364993586 58.826 2 0.19484635481146723 0.0004893964110929853 0.001075266230260807 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 41110 13120 HTVEDLVKV True PC9_epitope_Rep3 1038.5709598524597 1038.5698699358602 55.487 2 0.19484091171691045 0.0004893964110929853 0.001075401072882213 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 115206 15125 TRDSLPVSL True PC9_epitope_Rep2 986.53965972418 986.53856993586 63.438 2 0.1948402243760902 0.0004893964110929853 0.0010754181016881972 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 43360 5628 IGAEVYHNLK True NCI_RA007_Epitope_Rep5 1142.60840799034 1142.6067749037902 28.336 3 0.19483624022558482 0.0004893964110929853 0.001075516813979062 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 31662 10010 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 43.44 2 0.1948305131642546 0.0004893964110929853 0.0010756587249739257 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 96228 13442 RYQDAIRVF True PC9_epitope_Rep2 1166.6196413803798 1166.61854993586 56.985 2 0.194829113953009 0.0004893964110929853 0.0010756933989181207 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 137530 7010 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 31.928 2 0.19480469872550937 0.0004893964110929853 0.001076298614689133 ['ENSG00000127184|ENST00000247655|COX7C'] 103823 10564 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep3 1225.56488887629 1225.56378993586 45.701 2 0.1947993247488408 0.0004893964110929853 0.0010764318731117106 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 54590 20133 KYITQGQLLQF True PC9_epitope_Rep1 1337.73433677945 1337.7332299358602 82.271 2 0.19479817378728986 0.0004893964110929853 0.0010764604156399246 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 35853 11538 GTMDMSITRL True NCI_RA007_Epitope_Rep3 1123.53656557303 1123.5354699358602 52.513 2 0.1947973157592975 0.0004893964110929853 0.00107648169424517 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 14608 11585 DVAASEFFR True H1975_Epitope_Rep1 1040.4927095317598 1040.4916099358602 49.548 2 0.19479342572644018 0.0004893964110929853 0.0010765781701342078 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'ENO1|p.S254Y|1|0.15|ENSG00000074800|chr1:8865389-8865389|G/T|missense_variant'] 95963 8718 RYLEQLHQL True NCI_RA007_Epitope_Rep4 1198.64585612822 1198.64474993586 40.326 2 0.19478250467281102 0.0004893964110929853 0.0010768490672364841 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 24863 17173 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 71.316 2 0.19477767768249374 0.0004893964110929853 0.0010769688226750951 ['ENSG00000204592|ENST00000376630|HLA-E'] 40496 11774 HRDSGILGL True PC9_epitope_Rep2 966.5246783663799 966.52358993586 50.62 2 0.1947714180362457 0.0004893964110929853 0.0010771241415458573 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 14417 4407 DTDSEEEIR True NCI_RA007_Epitope_Rep1 1092.45711186868 1092.45600993586 21.256 2 0.1947669646950036 0.0004893964110929853 0.001077234654744595 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 10132 13826 AYVHMVTHF True PC9_epitope_Rep1 1103.52223583823 1103.52112993586 58.024 2 0.19476468259205704 0.0004893964110929853 0.0010772912913472603 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 90414 11263 REIFFPETA True H1975_Epitope_Rep1 1108.5553097883198 1108.5542099358602 48.299 2 0.19476282712546641 0.0004893964110929853 0.0010773373420071113 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 72659 4781 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 23.479 2 0.194758227146025 0.0004893964110929853 0.0010774515169999208 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 28273 19352 FRNIPGITL True PC9_epitope_Rep2 1029.5971150306498 1029.5960099358601 79.813 2 0.19475011084138788 0.0004893964110929853 0.001077652999454387 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 61490 5630 LKDDEVAQLK True NCI_RA007_Epitope_Rep1 1157.62920300457 1157.6275649037902 25.963 3 0.19473817139844352 0.0004893964110929853 0.0010779494577226685 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 105031 15833 SRDMTMFVT True PC9_epitope_Rep3 1086.48380172418 1086.4827099358602 66.056 2 0.19473554137763613 0.0004893964110929853 0.0010780147725485117 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 21580 5497 ERQPGAASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 26.219 2 0.19473172287534288 0.0004893964110929853 0.0010781096095891227 ['ENSG00000180921|ENST00000388913|FAM83H'] 134916 14269 VYVVGTAHF True PC9_epitope_Rep4 991.5127167003499 991.51160993586 62.788 2 0.19472863556452935 0.0004893964110929853 0.0010781862927373238 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 42645 3707 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 19.318 2 0.19472440126579552 0.0004893964110929853 0.001078291473860387 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 11884 8282 DHIKDSFHSL True PC9_epitope_Rep2 1197.57783613805 1197.57619490379 37.217 3 0.19472255914745426 0.0004893964110929853 0.001078337235788831 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 15069 21881 DYSDIVTTL True PC9_epitope_Rep5 1025.49170647225 1025.4906099358602 89.203 2 0.19472026511144244 0.0004893964110929853 0.0010783942269848325 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF'] 118373 5473 TYNQKHSLF True NCI_RA007_Epitope_Rep3 1136.5614577979202 1136.55982490379 28.536 3 0.19471946562114428 0.0004893964110929853 0.0010784140895921345 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 46032 14101 ISGLIYEETR True PC9_epitope_Rep1 1179.6135529404298 1179.61244993586 59.068 2 0.19471504945571022 0.0004893964110929853 0.0010785238118047671 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 74199 7402 NEFGEIQGDK True NCI_RA007_Epitope_Rep1 1135.51456717515 1135.51346993586 32.787 2 0.19471361260372652 0.0004893964110929853 0.0010785595136461352 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 136014 11680 WQYRQLSAL True NCI_RA007_Epitope_Rep3 1163.60874234351 1163.60764993586 53.06 2 0.19470466073736925 0.0004893964110929853 0.0010787819697309698 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 95642 11622 RYDPQTNEW True PC9_epitope_Rep5 1207.5258005651901 1207.52470993586 49.699 2 0.19470292867332017 0.0004893964110929853 0.0010788250172614204 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 70842 15893 LYDIILKNF True NCI_RA007_Epitope_Rep4 1137.64339651673 1137.6422899358602 69.004 2 0.1947009425144137 0.0004893964110929853 0.0010788743820110732 ['ENSG00000092010|ENST00000206451|PSME1'] 47702 16489 IYAPKLQEF True PC9_epitope_Rep4 1107.59644632431 1107.5953499358602 71.395 2 0.19469749964333696 0.0004893964110929853 0.0010789599578059212 ['ENSG00000175305|ENST00000308108|CCNE2'] 15338 5166 EAGEQGDIEPR True PC9_epitope_Rep1 1199.5418445521498 1199.54074993586 24.724 2 0.1946889651471403 0.0004893964110929853 0.0010791721200768699 ['ENSG00000145907|ENST00000356245|G3BP1'] 75664 8449 NLGGGVVTIER True H1975_Epitope_Rep1 1113.61422164677 1113.6131299358601 37.427 2 0.19468663859502197 0.0004893964110929853 0.0010792299639727277 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 10147 5855 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep3 1119.5171508382302 1119.51604993586 30.009 2 0.19465479828582202 0.0004893964110929853 0.0010800219060771716 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 108683 14784 SYQRAFNEF True PC9_epitope_Rep1 1160.5250722892 1160.5239699358601 61.686 2 0.1946500654492555 0.0004893964110929853 0.0010801396724023963 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 102473 23275 SLVELLNQI True PC9_epitope_Rep3 1027.5913609438699 1027.59026993586 94.804 2 0.19463943559456526 0.0004893964110929853 0.0010804042201152612 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 105704 11197 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep3 1170.4539414449798 1170.45284993586 48.167 2 0.19463655941932265 0.0004893964110929853 0.0010804758113378287 ['ENSG00000115758|ENST00000234111|ODC1'] 90661 8428 REQDLPLAEA True H1975_Epitope_Rep3 1140.5775017848798 1140.57640993586 37.402 2 0.19462700780267245 0.0004893964110929853 0.0010807135959047605 ['ENSG00000169895|ENST00000380155|SYAP1'] 92510 20687 RLYDGLFKVI True PC9_epitope_Rep5 1222.70739375562 1222.70628993586 84.628 2 0.19462180989656527 0.0004893964110929853 0.0010808430182307081 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 134515 21653 VYQLRFQFL True PC9_epitope_Rep1 1212.6655289436396 1212.6644299358602 88.116 2 0.19462015025718613 0.0004893964110929853 0.0010808843447569969 ['ENSG00000068654|ENST00000263857|POLR1A'] 2188 8354 AELWKNPTA True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 37.086 2 0.19461849966061257 0.0004893964110929853 0.001080925447680834 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C'] 21444 14865 ERISLQQEL True PC9_epitope_Rep5 1114.59823722946 1114.5971499358602 62.181 2 0.1946153342543021 0.0004893964110929853 0.0010810042765688698 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 74796 11167 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.46637496793 47.839 1 0.19461024768459556 0.0004893964110929853 0.0010811309607338647 ['ENSG00000144597|ENST00000396842|EAF1'] 114474 22491 TPYGYFLISA True PC9_epitope_Rep1 1130.5648118428599 1130.56370993586 91.311 2 0.19460582636373253 0.0004893964110929853 0.0010812410885589925 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 31908 15184 GEMDPNFISV True H1975_Epitope_Rep2 1107.49066092643 1107.4895699358601 63.562 2 0.19459642044951314 0.0004893964110929853 0.0010814754118227416 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 86041 9915 QHQSGIVQL True PC9_epitope_Rep2 1008.5352430500798 1008.53414993586 43.471 2 0.19458755157681382 0.0004893964110929853 0.0010816964027736517 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 35676 7683 GTEFGGSIYQK True NCI_RA007_Epitope_Rep5 1185.56660274801 1185.56550993586 36.256 2 0.19457729330946305 0.0004893964110929853 0.0010819520705737183 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 142741 13846 YYQHIVTTL True PC9_epitope_Rep4 1136.5866099166 1136.58550993586 61.159 2 0.19456933878643484 0.0004893964110929853 0.001082150363640087 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 25505 14340 FEGIVTDLIR True H1975_Epitope_Rep1 1161.63937376545 1161.63826993586 60.349 2 0.1945546408999113 0.0004893964110929853 0.0010825168534575739 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 102466 21023 SLVDEFKEL True PC9_epitope_Rep5 1078.55464108198 1078.55354993586 85.922 2 0.19454682659648606 0.0004893964110929853 0.0010827117527329809 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 90557 8631 REMEENFAV True H1975_Epitope_Rep1 1123.49680893603 1123.49570993586 38.127 2 0.1945398224464299 0.0004893964110929853 0.0010828864755940133 ['ENSG00000026025|ENST00000544301|VIM'] 29723 6969 FVM[Oxidation]QEEFSR True H1975_Epitope_Rep3 1187.5281094447498 1187.5270099358602 31.768 2 0.19452735301182872 0.0004893964110929853 0.001083197603340304 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 94712 6646 RSDPTSYAGY True H1975_Epitope_Rep3 1115.4883524273098 1115.48724993586 30.519 2 0.19452403508166563 0.0004893964110929853 0.0010832804048810556 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 31048 6688 GATEITTTITK True H1975_Epitope_Rep3 1134.61321858726 1134.6121299358601 30.68 2 0.1945216229304358 0.0004893964110929853 0.0010833406059849542 ['CON__ENSEMBL:ENSBTAP00000024146'] 82664 21106 PQPDVFPLF True PC9_epitope_Rep6 1058.54368247546 1058.5425899358602 94.019 2 0.1945128022829723 0.0004893964110929853 0.0010835607752728003 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 119637 9882 VATWFNQPAR True NCI_RA007_Epitope_Rep5 1188.6039913162397 1188.60288993586 44.655 2 0.19451211458933987 0.0004893964110929853 0.0010835779424533192 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 90440 8322 REIQEAIAVA True H1975_Epitope_Rep2 1098.6033226098998 1098.6022299358601 36.961 2 0.19451080983856103 0.0004893964110929853 0.001083610514236166 ['ENSG00000198218|ENST00000395443|QRICH1'] 75605 13499 NLDPLTETY True H1975_Epitope_Rep3 1064.50260550912 1064.5015099358602 57.2 2 0.1945074797453041 0.0004893964110929853 0.001083693651095219 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 138370 12851 YHGAEIVSL True PC9_epitope_Rep6 987.50254593947 987.50144993586 60.944 2 0.19450408234908761 0.0004893964110929853 0.0010837784747858173 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 92363 20087 RLPEIYIQL True PC9_epitope_Rep4 1143.66519459047 1143.6640899358601 85.397 2 0.19449912963108562 0.0004893964110929853 0.00108390214253457 ['EHD4|p.F425Sfs*51|1|0.18|ENSG00000103966|chr15:41900999-41900999|G/-|frameshift_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 134051 19218 VYKAFVMETF True PC9_epitope_Rep4 1233.6103821362897 1233.60928993586 82.023 2 0.1944988181454891 0.0004893964110929853 0.0010839099207009901 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 85218 8832 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 38.979 2 0.19449675097342192 0.0004893964110929853 0.001083961541868473 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 111360 14938 THQTIVVQL True PC9_epitope_Rep3 1037.58694426977 1037.58584993586 62.592 2 0.19449450473989705 0.0004893964110929853 0.001084017637331564 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 132592 2831 VVEVTHDLQK True NCI_RA007_Epitope_Rep1 1166.6295373577398 1166.62789490379 14.838 3 0.1944888873624751 0.0004893964110929853 0.0010841579335242695 ['ENSG00000149257|ENST00000358171|SERPINH1'] 134504 13104 VYQHLFTRI True PC9_epitope_Rep2 1175.6451278522297 1175.64349490379 55.681 3 0.1944872046227192 0.0004893964110929853 0.0010841999641501788 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 47784 19970 IYFEYSHAF True PC9_epitope_Rep1 1175.52876068731 1175.52766993586 81.639 2 0.19448239235166964 0.0004893964110929853 0.0010843201716503146 ['ENSG00000113318|ENST00000265081|MSH3'] 139615 14378 YLYPDITRL True H1975_Epitope_Rep2 1152.6179100448799 1152.6168099358601 60.455 2 0.19448071101529166 0.0004893964110929853 0.001084362173524482 ['ENSG00000131389|ENST00000622186|SLC6A6'] 79996 16952 PFAKPLPTF True PC9_epitope_Rep4 1016.5695033004799 1016.56840993586 73.196 2 0.19448001864101663 0.0004893964110929853 0.001084379470369379 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 104793 19810 SQYGEIVNI True PC9_epitope_Rep5 1021.5080252427299 1021.50692993586 81.247 2 0.19447938626173922 0.0004893964110929853 0.00108439526866526 ['ENSG00000134597|ENST00000305536|RBMX2'] 6773 18605 AQDFRVLYV True PC9_epitope_Rep4 1109.58694426977 1109.58584993586 79.64 2 0.19447793054020993 0.0004893964110929853 0.001084431636830646 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 88843 7181 QVASTLKQV True PC9_epitope_Rep5 972.5603951687598 972.55928993586 32.587 2 0.1944766210935152 0.0004893964110929853 0.001084464351669368 ['ENSG00000166295|ENST00000299381|ANAPC16'] 53366 14753 KQTALVELLK True PC9_epitope_Rep3 1141.7070594024499 1141.7054249037901 61.885 3 0.19447457422284614 0.0004893964110929853 0.0010845154920786893 ['CON__P02769'] 139826 6434 YPM[Oxidation]AVGLNK True NCI_RA007_Epitope_Rep5 1007.5110028286299 1007.50990993586 31.416 2 0.19446950881915284 0.0004893964110929853 0.001084642059968324 ['ENSG00000130255|ENST00000347512|RPL36'] 130952 4535 VTDKSMVDKY True H1975_Epitope_Rep3 1184.5747249035599 1184.57308490379 22.566 3 0.19446752267838321 0.0004893964110929853 0.001084691691179828 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 49874 19453 KIFDEILVNA True PC9_epitope_Rep4 1160.64412479272 1160.64302993586 82.941 2 0.19443915957644745 0.0004893964110929853 0.001085400698684001 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 48092 11933 IYNGDMEKI True PC9_epitope_Rep5 1081.51139637101 1081.51028993586 50.897 2 0.1944383664517071 0.0004893964110929853 0.0010854205315217434 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 118952 11724 VADTVARVL True PC9_epitope_Rep2 942.5498304850598 942.54872993586 50.43 2 0.19443608569685542 0.0004893964110929853 0.0010854775659889918 ['ENSG00000145632|ENST00000274289|PLK2'] 44164 19852 IITKDLFQV True PC9_epitope_Rep1 1075.62774645259 1075.62664993586 81.177 2 0.1944248311701141 0.0004893964110929853 0.0010857590501230307 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 77527 8122 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.58277496793 36.19 1 0.19441278215131175 0.0004893964110929853 0.0010860604862276055 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 89498 22609 QYILFPLRF True PC9_epitope_Rep1 1195.67536535135 1195.6742699358601 91.775 2 0.1943993753888649 0.0004893964110929853 0.0010863959882955415 ['ENSG00000101407|ENST00000373447|TTI1'] 5386 13906 ALSKEGIVAL True PC9_epitope_Rep4 999.5964463243098 999.59534993586 61.393 2 0.19439414440148464 0.0004893964110929853 0.0010865269210954733 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 104944 14897 SRDEYYHLL True PC9_epitope_Rep1 1194.56693710118 1194.56530490379 62.121 3 0.19438778201081686 0.0004893964110929853 0.001086686194503967 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 87806 7061 QREAEQSNVAL True PC9_epitope_Rep1 1243.61567819875 1243.61458993586 31.967 2 0.19438116789330476 0.0004893964110929853 0.001086851794356538 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 25995 19603 FGFEITHEV True PC9_epitope_Rep3 1077.51311062317 1077.51200993586 80.64 2 0.1943792189605315 0.0004893964110929853 0.0010869005952591256 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 6764 19020 AQDEHLITFF True PC9_epitope_Rep6 1219.58733819259 1219.58624993586 85.804 2 0.19437753250661127 0.0004893964110929853 0.0010869428255149281 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 95567 20065 RWSPVRPLVF True PC9_epitope_Rep5 1255.71896149883 1255.71786993586 82.233 2 0.19437071668107928 0.0004893964110929853 0.001087113516407914 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 108274 19275 SYIEHIFEI True PC9_epitope_Rep6 1149.57062549929 1149.5695299358601 86.788 2 0.19436461926291385 0.0004893964110929853 0.0010872662387746185 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 42446 7146 IEDVQKLAA True H1975_Epitope_Rep2 985.5444107514498 985.54330993586 32.422 2 0.1943590371030058 0.0004893964110929853 0.001087406074303648 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 40315 9175 HQQSIPAVL True NCI_RA007_Epitope_Rep4 991.5450794577898 991.5439899358599 42.131 2 0.19435363651092846 0.0004893964110929853 0.001087541378643629 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 38277 5726 HEEM[Oxidation]NYITA True H1975_Epitope_Rep3 1122.46517483502 1122.4640699358602 27.054 2 0.19435243830561424 0.0004893964110929853 0.0010875714003032392 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 41111 13209 HTVEDLVKV True PC9_epitope_Rep3 1038.5709598524597 1038.5698699358602 55.844 2 0.19434280095448864 0.0004893964110929853 0.0010878128993915303 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 42345 6103 IEANEALVK True H1975_Epitope_Rep3 985.5444107514498 985.54330993586 28.488 2 0.19433678398120782 0.0004893964110929853 0.0010879637039351105 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF'] 109844 14213 TEELPQLINA True H1975_Epitope_Rep2 1126.5870038394198 1126.5859099358602 59.821 2 0.19433642303852527 0.0004893964110929853 0.001087972750976562 ['ENSG00000139684|ENST00000378720|ESD'] 78650 16083 NYVEKGFQI True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 66.677 2 0.19433391921237939 0.0004893964110929853 0.001088035511546674 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 24082 12346 EYPDRIMNTF True NCI_RA007_Epitope_Rep5 1284.5808729131597 1284.5797699358602 54.136 2 0.1943308722123345 0.0004893964110929853 0.0010881118921380484 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 93517 8869 RQLDTETNL True PC9_epitope_Rep1 1088.5462016566 1088.5451099358602 38.954 2 0.1943106741508073 0.0004893964110929853 0.0010886183424710437 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant'] 110227 4627 TEQQQRFHEI True H1975_Epitope_Rep3 1314.6316626160599 1314.63001490379 22.92 3 0.19430714516300346 0.0004893964110929853 0.0010887068532885924 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 53998 17900 KVFDPVPVGV True PC9_epitope_Rep2 1055.60153170475 1055.6004299358601 74.156 2 0.1942987819527138 0.0004893964110929853 0.0010889166404325372 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 20817 21140 EQIKDIFYI True PC9_epitope_Rep3 1167.6175756917098 1167.61646993586 86.6 2 0.1942950165393178 0.0004893964110929853 0.0010890111072665042 ['ENSG00000164902|ENST00000297540|PHAX'] 104776 13555 SQWSLQHEI True PC9_epitope_Rep6 1126.54072235334 1126.5396299358601 63.871 2 0.1942905857085706 0.0004893964110929853 0.00108912227864092 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 40819 7809 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.4134299358602 34.984 2 0.19428742475073454 0.0004893964110929853 0.0010892015953344733 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 72678 5369 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 25.718 2 0.1942799992786621 0.0004893964110929853 0.0010893879426221518 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 71389 19255 LYSEVSHLL True PC9_epitope_Rep3 1059.56006081559 1059.5589699358602 79.286 2 0.19427892298188143 0.0004893964110929853 0.0010894149556768136 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 74012 12075 NDEELNKLLGK True PC9_epitope_Rep6 1271.6721304457099 1271.67049490379 57.767 3 0.19427759808166964 0.0004893964110929853 0.001089448209139218 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 96229 13528 RYQDAIRVF True PC9_epitope_Rep2 1166.6196413803798 1166.61854993586 57.327 2 0.19427401305050132 0.0004893964110929853 0.0010895381943770576 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 41589 10431 IAAPFTSKL True H1975_Epitope_Rep3 946.5487678559 946.54766993586 45.182 2 0.1942648576455288 0.0004893964110929853 0.0010897680313041226 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19758004-19758388:-|nuORF'] 38376 5830 HEKQVYDIAA True H1975_Epitope_Rep2 1172.5825871653199 1172.5814899358602 27.416 2 0.1942633529233158 0.0004893964110929853 0.0010898058104431207 ['ENSG00000018510|ENST00000264167|AGPS'] 40482 11006 HRDIVNLQV True PC9_epitope_Rep4 1092.6039913162401 1092.60288993586 50.112 2 0.1942545350075676 0.0004893964110929853 0.0010900272287134782 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 88242 5909 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 27.715 2 0.19425220242768793 0.0004893964110929853 0.001090085807446031 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 125985 13424 VLDPYLLKY True H1975_Epitope_Rep1 1122.63249747986 1122.6314099358601 56.748 2 0.19425216348950095 0.0004893964110929853 0.0010900867853384252 ['ENSG00000239789|ENST00000285298|MRPS17'] 89432 5114 QYEDIANR True NCI_RA007_Epitope_Rep2 1007.4672230599099 1007.46612993586 24.515 2 0.19423228604718595 0.0004893964110929853 0.0010905861016575536 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 86210 18962 QIIRELQVL True PC9_epitope_Rep2 1110.67609362734 1110.6749899358601 78.3 2 0.19422447440706195 0.0004893964110929853 0.0010907823908496443 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 129492 26137 VRKERKRHKT True PC9_epitope_Rep3 1336.81638412432 1336.8152899358602 106.52 2 0.19421945765008847 0.0004893964110929853 0.0010909084695076602 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 111422 14547 THSNTIVVSL True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 60.78 2 0.19420562051955853 0.0004893964110929853 0.0010912562931800827 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 84186 9617 PYKVTQDEL True PC9_epitope_Rep4 1091.54989005471 1091.5487899358602 44.617 2 0.19418346144873908 0.0004893964110929853 0.0010918135369544792 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 71082 22104 LYLEPQGTLF True PC9_epitope_Rep2 1179.6175756917098 1179.61646993586 90.496 2 0.19417587794782978 0.0004893964110929853 0.0010920043080726656 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 41649 7378 IAEVDASVVR True H1975_Epitope_Rep3 1057.5767735088898 1057.57566993586 33.357 2 0.19417547396949653 0.0004893964110929853 0.001092014471519614 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1', 'ENST00000480561.5_1_3:48636882-48638270:-|nuORF', 'ENST00000471189.5_1_3:48636563-48638429:-|nuORF'] 8684 15160 AVALERTFVGA True PC9_epitope_Rep2 1132.62405805448 1132.62296993586 63.571 2 0.19416671054473617 0.0004893964110929853 0.0010922349685799583 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 142162 19548 YVTDVLYRV True PC9_epitope_Rep5 1126.60225998074 1126.60116993586 80.244 2 0.19416626150558425 0.0004893964110929853 0.0010922462680835621 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1'] 14444 11795 DTEKELQALY True H1975_Epitope_Rep1 1208.59248314268 1208.5913899358602 50.361 2 0.19416255345004316 0.0004893964110929853 0.001092339581102719 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 75599 13548 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.5015099358602 57.236 2 0.19415131945516564 0.0004893964110929853 0.0010926223327812176 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 108084 20417 SYANYFIRL True PC9_epitope_Rep2 1145.58694426977 1145.58584993586 83.961 2 0.19415028174205648 0.0004893964110929853 0.0010926484549862823 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 88640 11423 QTELENQLEY True H1975_Epitope_Rep3 1265.5775613545297 1265.5764699358601 49.055 2 0.1941486412362876 0.0004893964110929853 0.0010926897524831441 ['ENSG00000135090|ENST00000392533|TAOK3'] 29479 12646 FVEWIPNNVK True NCI_RA007_Epitope_Rep1 1244.65535818276 1244.6542699358602 53.17 2 0.19413867953669076 0.0004893964110929853 0.001092940558304606 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 26718 9413 FIVNTNVPR True NCI_RA007_Epitope_Rep2 1058.58727862294 1058.5861899358601 41.225 2 0.194129981852369 0.0004893964110929853 0.0010931595872032494 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 118204 22096 TYKNFFYLI True PC9_epitope_Rep1 1207.62774645259 1207.62664993586 89.805 2 0.1941272049507255 0.0004893964110929853 0.0010932295256267737 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 120110 4961 VEAAAELSAK True H1975_Epitope_Rep1 987.5236753068699 987.52256993586 24.157 2 0.1941162758969932 0.0004893964110929853 0.0010935048259117304 ['ENSG00000159335|ENST00000309083|PTMS'] 32348 20833 GFGFVTFDDHD True PC9_epitope_Rep5 1255.51456717515 1255.51346993586 85.183 2 0.19411131114615132 0.0004893964110929853 0.001093629909776138 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 54054 14717 KVIEGLDTGL True PC9_epitope_Rep4 1043.5862755634298 1043.5851699358602 64.544 2 0.1941093663171967 0.0004893964110929853 0.0010936789124644344 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 113580 14818 TLVEAIKQV True PC9_epitope_Rep2 999.5964463243098 999.59534993586 62.261 2 0.19410415659599833 0.0004893964110929853 0.0010938101895325303 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 95988 17316 RYLGKVLEL True PC9_epitope_Rep3 1089.65462990677 1089.6535299358602 71.781 2 0.19409489054885198 0.0004893964110929853 0.0010940437189048257 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000573641.1_1_17:2598433-2598937:-|nuORF'] 61896 10400 LLDEAIQAVK True H1975_Epitope_Rep1 1098.6284747285797 1098.62736993586 44.953 2 0.19408880725673658 0.0004893964110929853 0.0010941970614541823 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'ENST00000563984.1_1_16:46717374-46723045:-|nuORF', 'ENST00000569950.1_1_16:46715399-46723351:-|nuORF'] 38963 9667 HHIVSIEV True PC9_epitope_Rep4 932.50796567308 932.50686993586 44.811 2 0.19408684825119019 0.0004893964110929853 0.0010942464470182125 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 137566 8964 YEEMGIKPP True H1975_Epitope_Rep2 1062.5055827145798 1062.5044899358602 39.434 2 0.19408359607589568 0.0004893964110929853 0.0010943284376893861 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 70902 22659 LYEQAFQLL True PC9_epitope_Rep5 1123.5913609438699 1123.59026993586 92.159 2 0.19408327741589568 0.0004893964110929853 0.0010943364717658432 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 133525 18434 VWMRSPLSTF True PC9_epitope_Rep6 1222.61686449906 1222.61576993586 83.549 2 0.19407809039205118 0.0004893964110929853 0.0010944672556626324 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 55065 14232 KYTKIFNDF True PC9_epitope_Rep2 1174.60225998074 1174.60116993586 60.01 2 0.19407500761913096 0.0004893964110929853 0.0010945449911007458 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 114643 8162 TQDTQPHYI True PC9_epitope_Rep5 1101.50908787189 1101.50798993586 36.336 2 0.19407390816938397 0.0004893964110929853 0.001094572716249146 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 115335 14927 TRIGLETSL True PC9_epitope_Rep5 988.55530978832 988.55420993586 62.422 2 0.19406953327757928 0.0004893964110929853 0.0010946830461621238 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 127379 9309 VNDGDMRLAD True PC9_epitope_Rep5 1104.48697252832 1104.4858699358601 40.76 2 0.19405748794125302 0.0004893964110929853 0.0010949868737913403 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 137207 18197 YAYDGKDYLAL True PC9_epitope_Rep4 1290.6132185872598 1290.6121299358601 78.064 2 0.19405055608501412 0.0004893964110929853 0.0010951617590009685 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 53666 8658 KSDLQPPNYY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 38.262 2 0.19403135350958284 0.0004893964110929853 0.0010956463709568952 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 138488 14622 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 61.066 2 0.19402397582369785 0.0004893964110929853 0.0010958326174679088 ['ENSG00000115306|ENST00000356805|SPTBN1'] 475 17033 AAMEDLTRL True PC9_epitope_Rep1 1018.5117307241799 1018.51062993586 70.341 2 0.19401992245742558 0.0004893964110929853 0.0010959349564704415 ['ENSG00000104408|ENST00000220849|EIF3E', 'EIF3E|p.E194D|1|0.39|ENSG00000104408|chr8:108229085-108229085|C/A|missense_variant', 'EIF3E|p.D183G|1|0.17|ENSG00000104408|chr8:108229119-108229119|T/C|missense_variant', 'ENST00000523646.1_1_8:109240494-109241379:-|nuORF'] 62102 7478 LLEDKHFQSY True H1975_Epitope_Rep1 1278.6244519773 1278.6228149037902 33.763 3 0.19401983352412422 0.0004893964110929853 0.0010959372019573367 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 104108 4763 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.187 2 0.19401753017919865 0.0004893964110929853 0.0010959953609787137 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 108492 14465 SYMGHFDLL True NCI_RA007_Epitope_Rep4 1081.49026700361 1081.4891699358602 62.993 2 0.19401671774659257 0.0004893964110929853 0.0010960158754858525 ['ENSG00000169976|ENST00000367569|SF3B5'] 54963 9099 KYQEVTNNL True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 39.85 2 0.19401403740138198 0.0004893964110929853 0.0010960835588592897 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 22377 16087 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69076993586 67.085 2 0.19401082386100532 0.0004893964110929853 0.001096164711861902 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 113059 10692 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 1189.6376598937302 1189.63656993586 45.58 2 0.19400871218017665 0.0004893964110929853 0.00109621804238259 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 11969 19127 DHNLLLYEA True PC9_epitope_Rep5 1086.53457434374 1086.53346993586 78.606 2 0.19400582846345268 0.0004893964110929853 0.0010962908748801666 ['ENSG00000183751|ENST00000568546|TBL3'] 8298 14836 ATIIDILTK True NCI_RA007_Epitope_Rep5 986.60119735158 986.60010993586 63.737 2 0.19399499817011986 0.0004893964110929853 0.0010965644531670635 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 28498 11121 FSDVNMQEY True H1975_Epitope_Rep3 1131.4542754177098 1131.45377496793 47.872 1 0.19399123760646525 0.0004893964110929853 0.001096659462779567 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 24790 6278 FATHAAALSVR True NCI_RA007_Epitope_Rep4 1142.6196413803798 1142.61799490379 30.751 3 0.19399035249956798 0.0004893964110929853 0.0010966818259633595 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 96032 20756 RYLPTGSFPF True PC9_epitope_Rep1 1183.6025943339098 1183.6014899358602 84.665 2 0.1939887180820605 0.0004893964110929853 0.0010967231224926345 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 26056 8889 FGIGQDIQPK True NCI_RA007_Epitope_Rep5 1101.58185888933 1101.5807699358602 40.854 2 0.19398857949105935 0.0004893964110929853 0.0010967266243179174 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 34685 14344 GQDGQLKGFAV True PC9_epitope_Rep3 1118.5720224816198 1118.57092993586 60.259 2 0.19398718099106685 0.0004893964110929853 0.001096761961313452 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 106176 8464 STDPREALQY True H1975_Epitope_Rep1 1178.5567663402999 1178.5556699358601 37.486 2 0.19398705388036486 0.0004893964110929853 0.0010967651731757968 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 71406 13451 LYSRVQATF True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 56.755 2 0.19397769772708748 0.0004893964110929853 0.00109700161250021 ['nc|ENSG00000103264|Q5XUX0-2|FBXO31', 'ENSG00000103264|ENST00000311635|FBXO31'] 22350 3527 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 18.517 2 0.19397380257803296 0.0004893964110929853 0.001097100061869798 ['ENSG00000100347|ENST00000350028|SAMM50'] 24066 19880 EYNSDLHQFF True PC9_epitope_Rep1 1298.5567663402996 1298.5556699358601 81.287 2 0.19397073384909513 0.0004893964110929853 0.001097177629821282 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 53213 19834 KQFDDVLIYL True PC9_epitope_Rep6 1252.6703395405598 1252.66924993586 88.953 2 0.19397054265798563 0.0004893964110929853 0.001097182462721632 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26'] 108070 18985 SYANVKQWL True PC9_epitope_Rep3 1107.57129420563 1107.57018993586 78.249 2 0.19395945551545507 0.0004893964110929853 0.0010974627583720936 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 24873 16931 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.4960299358602 70.141 2 0.1939500159658728 0.0004893964110929853 0.0010977014575783914 ['ENSG00000204592|ENST00000376630|HLA-E'] 131181 10402 VTELHVISY True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 44.96 2 0.19393956072878607 0.0004893964110929853 0.0010979659013812526 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 40914 15015 HSQFLGYPITL True NCI_RA007_Epitope_Rep1 1274.6659228664598 1274.66482993586 62.47 2 0.19392991896606182 0.0004893964110929853 0.0010982098266363097 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 113054 10029 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1189.6376598937302 1189.63656993586 43.515 2 0.193923816741349 0.0004893964110929853 0.0010983642338215983 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 53330 15245 KQM[Oxidation]EQISQFL True PC9_epitope_Rep4 1266.62782348602 1266.62672993586 66.568 2 0.19392180189101196 0.0004893964110929853 0.0010984152212164223 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 35857 13973 GTMEWIMIK True NCI_RA007_Epitope_Rep4 1107.54567370475 1107.5445699358602 61.02 2 0.19392090117715582 0.0004893964110929853 0.0010984380152666159 ['ENSG00000168273|ENST00000477703|UQCC5'] 87945 19928 QRLINLVGESL True PC9_epitope_Rep2 1240.7139356880398 1240.71282993586 82.051 2 0.19391375877744713 0.0004893964110929853 0.0010986187822695072 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 133814 18008 VYFVAPAKF True PC9_epitope_Rep4 1040.5695033004797 1040.56840993586 77.326 2 0.19390820665881686 0.0004893964110929853 0.001098759321453493 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 15165 8067 EAALSTALSEK True NCI_RA007_Epitope_Rep1 1118.58191845898 1118.58082993586 35.377 2 0.19390631843326192 0.0004893964110929853 0.0010988071216725688 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 139352 20498 YLLPAIVHI True PC9_epitope_Rep4 1037.62735252977 1037.62677496793 86.996 1 0.1938980069370212 0.0004893964110929853 0.001099017551063467 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 23947 19332 EYLLKVNEI True PC9_epitope_Rep3 1119.61757569171 1119.61646993586 79.581 2 0.19389603824424012 0.0004893964110929853 0.001099067400092764 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 118298 21502 TYLPTSPLL True PC9_epitope_Rep5 1003.55899818643 1003.55790993586 87.743 2 0.19388346254996078 0.0004893964110929853 0.0010993858812142013 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 44087 21516 IIMLEALERV True PC9_epitope_Rep5 1185.67913040245 1185.6780299358602 87.797 2 0.19387603736114903 0.0004893964110929853 0.001099573968552836 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 72302 9575 MIEPRTLQY True H1975_Epitope_Rep1 1149.58523001761 1149.5841299358601 41.754 2 0.19387426751985495 0.0004893964110929853 0.0010996188051362566 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 34928 7532 GQNPTEAEL True NCI_RA007_Epitope_Rep5 957.44033960573 957.43924993586 35.658 2 0.19386060509199887 0.0004893964110929853 0.0010999649863449362 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 115245 12442 TREEGTPLTL True PC9_epitope_Rep1 1115.5822528121498 1115.5811499358601 52.723 2 0.1938604438156208 0.0004893964110929853 0.0010999690734492015 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 45542 8032 IQRQETISL True NCI_RA007_Epitope_Rep4 1086.6033226099 1086.6022299358601 37.661 2 0.19385813124048792 0.0004893964110929853 0.0011000276809520623 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 113573 21761 TLVDEVFRI True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 88.537 2 0.19385662883823618 0.0004893964110929853 0.0011000657579526229 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 95259 5701 RVMQDIVYK True NCI_RA007_Epitope_Rep3 1150.6168644990596 1150.61576993586 29.401 2 0.19385631517056484 0.0004893964110929853 0.0011000737077374663 ['ENST00000496911.1_1_2:74733844-74734286:-|nuORF', 'ENST00000480844.2_1_2:74732736-74734502:-|nuORF', 'nc|ENSG00000115289|Q9BSM1-3|PCGF1', 'ENST00000475863.5_1_2:74732272-74734286:-|nuORF', 'ENSG00000115289|ENST00000233630|PCGF1'] 37910 10139 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 43.875 2 0.19385386820414832 0.0004893964110929853 0.0011001357271250396 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 132577 14740 VVEQLKDWLY True H1975_Epitope_Rep1 1291.68123857743 1291.68014993586 61.918 2 0.19384951174533105 0.0004893964110929853 0.0011002461520742233 ['ENSG00000164109|ENST00000296509|MAD2L1'] 134672 20004 VYSRTFTWL True PC9_epitope_Rep2 1171.6025943339098 1171.6014899358602 82.349 2 0.19384767791284896 0.0004893964110929853 0.001100292638302522 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 9605 16829 AYAIIKEEL True PC9_epitope_Rep1 1048.580461907 1048.57936993586 69.557 2 0.1938434661755889 0.0004893964110929853 0.0011003994100251184 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 88973 8165 QVIGVVLQK True NCI_RA007_Epitope_Rep3 982.6175161220598 982.61640993586 39.236 2 0.19384058106489158 0.0004893964110929853 0.0011004725564428988 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 12829 11715 DLGIEIPAEK True H1975_Epitope_Rep1 1083.58119018299 1083.58008993586 50.053 2 0.193838731249917 0.0004893964110929853 0.00110051945749937 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 109329 13695 TAYWKELSL True H1975_Epitope_Rep2 1109.57571087973 1109.57460993586 57.82 2 0.1938386103306599 0.0004893964110929853 0.0011005225234114145 ['ENST00000579880.5_1_17:8339285-8348278:+|nuORF', 'ENST00000580738.5_1_17:8339285-8349209:+|nuORF', 'nc|ENSG00000166579|Q9GZM8-3|NDEL1', 'ENSG00000166579|ENST00000334527|NDEL1', 'nc|ENSG00000166579|Q9GZM8-2|NDEL1'] 1618 16859 AEFLKVFLP True H1975_Epitope_Rep2 1062.6113681124598 1062.61026993586 70.094 2 0.1938332101662975 0.0004893964110929853 0.0011006594535026412 ['ENSG00000176171|ENST00000368636|BNIP3'] 74839 13852 NHFMDNTTL True PC9_epitope_Rep1 1091.47059418819 1091.46948993586 58.123 2 0.19382635234207535 0.0004893964110929853 0.0011008333695926048 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 37829 15351 GYIERPQLI True PC9_epitope_Rep4 1087.6025943339098 1087.6014899358602 66.98 2 0.19382633103888391 0.0004893964110929853 0.001100833909889651 ['nc|ENSG00000164329|Q6PIY7-2|TENT2', 'ENSG00000164329|ENST00000453514|TENT2'] 105659 14683 SSEELPLYY True H1975_Epitope_Rep2 1099.5073565363898 1099.50677496793 61.64 1 0.19381372169590907 0.0004893964110929853 0.001101153757968828 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 118026 19790 TYEGIFKTL True PC9_epitope_Rep5 1070.56481184286 1070.56370993586 81.167 2 0.1938115533298017 0.0004893964110929853 0.0011012087700447031 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 95794 22822 RYILEPFFI True PC9_epitope_Rep1 1196.65938093404 1196.65828993586 92.588 2 0.19380590503610526 0.0004893964110929853 0.001101352081830496 ['ENSG00000151012|ENST00000280612|SLC7A11'] 116349 7817 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51748993586 35.051 2 0.19380340041696617 0.0004893964110929853 0.0011014156364659918 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 108444 20284 SYLPLAHMF True PC9_epitope_Rep4 1077.53173789277 1077.53064993586 86.166 2 0.19379790265706967 0.0004893964110929853 0.001101555154854721 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 90510 5506 RELPFTKSA True H1975_Epitope_Rep2 1047.57129420563 1047.57018993586 26.191 2 0.1937960280505244 0.0004893964110929853 0.0011016027313883593 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 31528 5356 GEDLTKNHDEL True NCI_RA007_Epitope_Rep4 1269.58370936413 1269.58207490379 27.169 3 0.19379533058796808 0.0004893964110929853 0.0011016204331491684 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 142630 20699 YYNPHLLLNTL True PC9_epitope_Rep3 1359.7186867153098 1359.7175899358601 84.892 2 0.1937949233065103 0.0004893964110929853 0.0011016307701785708 ['ENSG00000205339|ENST00000379719|IPO7'] 15079 20930 DYSSILQKF True PC9_epitope_Rep3 1099.55497543515 1099.5538699358601 85.785 2 0.19378730909736644 0.0004893964110929853 0.001101824040939576 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 15196 8509 EADEYLDKY True H1975_Epitope_Rep1 1144.49243474824 1144.4913299358602 37.66 2 0.19378631456193585 0.0004893964110929853 0.0011018492876501598 ['ENSG00000117724|ENST00000366955|CENPF'] 140715 6526 YSAPQHDYY True H1975_Epitope_Rep3 1142.46688870674 1142.4657899358601 30.069 2 0.1937713254796358 0.0004893964110929853 0.0011022298622270811 ['ENSG00000064195|ENST00000434704|DLX3'] 137511 6513 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 29.968 2 0.19377125810475881 0.0004893964110929853 0.0011022315731807361 ['ENSG00000127184|ENST00000247655|COX7C'] 41462 15550 HYKPTPLYF True PC9_epitope_Rep5 1164.59678067748 1164.59568993586 64.823 2 0.19376977078568355 0.0004893964110929853 0.0011022693436349902 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 136430 20065 WVDPNSPVL True PC9_epitope_Rep2 1025.51819600361 1025.51767496793 82.586 1 0.1937692612659492 0.0004893964110929853 0.0011022822831824267 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 74880 7180 NHHLQETSF True PC9_epitope_Rep3 1111.50467119779 1111.50356993586 32.63 2 0.19376408702545822 0.0004893964110929853 0.001102413694630746 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 17772 17688 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.51708993586 73.318 2 0.19376135482279966 0.0004893964110929853 0.0011024830913860637 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 76547 20213 NQITQLESL True PC9_epitope_Rep5 1044.54513902744 1044.54457496793 82.795 1 0.19375879522402786 0.0004893964110929853 0.001102548108052165 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 98974 8421 SHDDGNIDL True PC9_epitope_Rep2 984.41485313388 984.41374993586 37.762 2 0.1937576920597429 0.0004893964110929853 0.00110257613084209 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 95969 13912 RYLEQLHQL True PC9_epitope_Rep1 1198.64585612822 1198.64474993586 58.348 2 0.19375345230977142 0.0004893964110929853 0.0011026838364280762 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 68090 4720 LTDNGRHITY True H1975_Epitope_Rep2 1188.58873517492 1188.5870849037901 23.248 3 0.19375271805454752 0.0004893964110929853 0.0011027024903424937 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.A516Qfs*19|1|0.53|ENSG00000103197|chr16:2064373-2064373|G/-|frameshift_variant'] 75590 5882 NLDKNTVGY True H1975_Epitope_Rep3 1022.5032742154599 1022.50216993586 27.634 2 0.19374060226525605 0.0004893964110929853 0.00110301034031067 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11'] 71909 16469 MEQISQFLQAA True H1975_Epitope_Rep2 1264.61217304144 1264.61106993586 68.566 2 0.19373992576343896 0.0004893964110929853 0.001103027532078696 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 7130 15750 AQWDIGIAHA True PC9_epitope_Rep6 1080.53524305008 1080.5341499358601 72.813 2 0.19373491251726013 0.0004893964110929853 0.001103154940798066 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'nc|ENSG00000147548|Q9BZ95-2|NSD3'] 78276 13524 NYIGLINRI True NCI_RA007_Epitope_Rep1 1074.61857875122 1074.61748993586 56.613 2 0.19373250599425706 0.0004893964110929853 0.0011032161064147808 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 116281 9766 TTDGKLPEV True PC9_epitope_Rep5 958.4971262058599 958.49602993586 42.537 2 0.1937318823613989 0.0004893964110929853 0.0011032319575923991 ['ENSG00000149257|ENST00000358171|SERPINH1'] 48172 10379 IYPPKLHQF True PC9_epitope_Rep6 1141.62841515893 1141.62676490379 50.646 3 0.1937311103654352 0.0004893964110929853 0.0011032515801030797 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 131121 10805 VTEEPQRLFY True H1975_Epitope_Rep2 1280.64010204144 1280.63900993586 46.59 2 0.1937238848181014 0.0004893964110929853 0.0011034352552588135 ['nc|ENSG00000104081|Q96LC9-3|BMF', 'nc|ENSG00000104081|Q96LC9-2|BMF', 'ENSG00000104081|ENST00000354670|BMF'] 37678 8635 GVYGDVQRV True PC9_epitope_Rep4 991.5086939490699 991.50758993586 40.702 2 0.19372317325316513 0.0004893964110929853 0.0011034533450695577 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 7940 6264 ATAQVNPLYK True NCI_RA007_Epitope_Rep3 1103.5975089534697 1103.59640993586 31.641 2 0.19372283596140694 0.0004893964110929853 0.0011034619199974181 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENST00000425115.1_1_3:44751367-44751973:-|nuORF'] 8685 14454 AVALERTFVGA True PC9_epitope_Rep4 1132.62405805448 1132.62296993586 63.506 2 0.1937206865866094 0.0004893964110929853 0.0011035165648643898 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 116931 19880 TVFTDHMLTV True PC9_epitope_Rep3 1162.5692456002998 1162.5681499358602 81.707 2 0.19372016773434259 0.0004893964110929853 0.0011035297563687376 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 77135 18495 NRPEFITEF True PC9_epitope_Rep2 1151.56112344475 1151.56002993586 76.476 2 0.19371761993916972 0.0004893964110929853 0.0011035945348111815 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 68299 6881 LTEIIASR True H1975_Epitope_Rep3 901.5232813840499 901.52218993586 31.426 2 0.19370816667489385 0.0004893964110929853 0.001103834920161374 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 108272 21461 SYIEHIFEI True PC9_epitope_Rep5 1149.57062549929 1149.5695299358601 87.588 2 0.1937074201197434 0.0004893964110929853 0.001103853906414315 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 118252 11727 TYLEKAIKI True PC9_epitope_Rep6 1077.6433965167298 1077.6422899358602 56.256 2 0.19370239111493645 0.0004893964110929853 0.0011039818116704585 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 142592 16595 YYLTDVDRI True PC9_epitope_Rep6 1156.5764391557198 1156.57534993586 76.287 2 0.1937013982192045 0.0004893964110929853 0.0011040070662530438 ['ENSG00000088256|ENST00000078429|GNA11'] 141680 10429 YTTDRVMTV True PC9_epitope_Rep2 1084.5222954078802 1084.52118993586 45.435 2 0.19369944502561448 0.0004893964110929853 0.0011040567479728316 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 65849 10048 LSDLGRLSY True H1975_Epitope_Rep3 1022.53965972418 1022.53856993586 43.685 2 0.19368922357932053 0.0004893964110929853 0.0011043167787532814 ['ENSG00000083168|ENST00000265713|KAT6A', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF'] 75098 12738 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 53.872 2 0.19368314539972994 0.0004893964110929853 0.0011044714350854801 ['ENSG00000171223|ENST00000302754|JUNB'] 122070 22325 VFYPYPQYF True PC9_epitope_Rep5 1222.5698972232997 1222.5688099358601 90.882 2 0.19367788899321203 0.0004893964110929853 0.0011046051993130097 ['ENSG00000103160|ENST00000219439|HSDL1'] 12434 13321 DIVMTQSPDSL True NCI_RA007_Epitope_Rep5 1204.56455414268 1204.56344993586 57.921 2 0.19367365318060506 0.0004893964110929853 0.0011047130034430102 ['nc|ENSG00000211598|P06312|IGKV4-1'] 24104 9624 EYPDRIM[Oxidation]NTF True NCI_RA007_Epitope_Rep4 1300.57578791316 1300.57468993586 43.868 2 0.1936706032862416 0.0004893964110929853 0.0011047906317309555 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 132535 12474 VVDPNQVNV True PC9_epitope_Rep1 982.5083595959001 982.50726993586 52.849 2 0.19366999826499087 0.0004893964110929853 0.0011048060318534553 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 31751 8464 GEHGLIIRV True NCI_RA007_Epitope_Rep4 992.57671393924 992.57560993586 39.365 2 0.1936642548964445 0.0004893964110929853 0.001104952233438237 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 77516 10910 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4603699358602 46.996 2 0.193662015312499 0.0004893964110929853 0.0011050092489187026 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 108228 22186 SYIALPLTL True PC9_epitope_Rep4 989.57973363101 989.57918496793 93.585 1 0.1936598480904092 0.0004893964110929853 0.0011050644250147853 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 141849 5937 YVDGVEVHNA True NCI_RA007_Epitope_Rep5 1101.50908787189 1101.50798993586 29.522 2 0.19365561828849792 0.0004893964110929853 0.001105172121039271 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 44553 8206 ILNPEEIEK True H1975_Epitope_Rep1 1083.58119018299 1083.58008993586 36.506 2 0.19362993700394784 0.0004893964110929853 0.001105826224501288 ['ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'ENST00000484488.5_1_20:60711915-60714832:-|nuORF'] 132554 4870 VVEASEAAYK True NCI_RA007_Epitope_Rep2 1065.53423999057 1065.5331499358601 23.566 2 0.19362371570413206 0.0004893964110929853 0.0011059847396881195 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 118453 15574 TYPIKTPTF True PC9_epitope_Rep4 1066.5698972233001 1066.5688099358601 67.825 2 0.19362296485403532 0.0004893964110929853 0.0011060038724630963 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 109842 4724 TEELNREVATN True NCI_RA007_Epitope_Rep5 1274.6102584651396 1274.60916993586 24.855 2 0.1936202645805958 0.0004893964110929853 0.0011060726821815305 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2'] 106977 8571 SVEGQLEFR True H1975_Epitope_Rep3 1063.52982331647 1063.5287299358602 37.959 2 0.1936194959930668 0.0004893964110929853 0.0011060922684981976 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 88871 11027 QVDPNYAYAY True H1975_Epitope_Rep3 1202.5244035828598 1202.5233099358602 47.504 2 0.19361581253458332 0.0004893964110929853 0.0011061861408184586 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 2219 4744 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep2 1120.4971436696399 1120.4960499358601 23.339 2 0.1936100013798484 0.0004893964110929853 0.0011063342533636897 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 132753 21605 VVINFDFPKL True PC9_epitope_Rep2 1190.6699456177398 1190.6688499358602 88.578 2 0.19360047164813377 0.0004893964110929853 0.0011065771866591828 ['ENSG00000110367|ENST00000534980|DDX6'] 17632 18172 EHIQNIMTL True PC9_epitope_Rep3 1097.55392988933 1097.55282993586 75.102 2 0.1935914804764423 0.0004893964110929853 0.0011068064399468837 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 131640 5161 VTLTSEEEAR True H1975_Epitope_Rep3 1133.5564319871298 1133.55532993586 24.955 2 0.19356350197218222 0.0004893964110929853 0.001107520129351327 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 134071 6617 VYKPAQNSW True NCI_RA007_Epitope_Rep3 1091.5399940773498 1091.5388899358602 33.087 2 0.1935620681413382 0.0004893964110929853 0.0011075567166395127 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 27868 20183 FQDPVPLTV True PC9_epitope_Rep4 1014.5385970950199 1014.53750993586 85.771 2 0.19356091120778174 0.0004893964110929853 0.001107586239179376 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 22408 4878 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56219490379 23.849 3 0.19355968440146354 0.0004893964110929853 0.0011076175455889351 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 140362 13164 YRDPTTVTTL True PC9_epitope_Rep5 1165.59790287629 1165.5968099358602 55.64 2 0.1935518005249509 0.0004893964110929853 0.001107818752446494 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 88974 8248 QVIGVVLQK True NCI_RA007_Epitope_Rep3 982.6175161220598 982.61640993586 39.576 2 0.19354606039202854 0.0004893964110929853 0.0011079652712159141 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 60938 12369 LIDADPYLKY True H1975_Epitope_Rep3 1209.62814037541 1209.6270499358602 52.763 2 0.19354126698573096 0.0004893964110929853 0.0011080876393673382 ['ENSG00000145386|ENST00000274026|CCNA2'] 138569 5590 YIDENQDRY True H1975_Epitope_Rep2 1214.52038083158 1214.5192899358601 26.504 2 0.1935262387550577 0.0004893964110929853 0.0011084713744023253 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 118086 19018 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.54357496793 81.243 1 0.19351662257108818 0.0004893964110929853 0.0011087169866370646 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 53644 18693 KSADEVLFTGV True PC9_epitope_Rep1 1164.6026539035602 1164.60154993586 76.694 2 0.19351429664708308 0.0004893964110929853 0.0011087764025348894 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 84151 17077 PYFNAPVYL True NCI_RA007_Epitope_Rep5 1082.5436824754597 1082.5425899358602 72.455 2 0.19351424938413359 0.0004893964110929853 0.0011087776099034691 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 78638 19951 NYTDIKDYL True PC9_epitope_Rep5 1143.54480467427 1143.54370993586 81.794 2 0.1935081629062352 0.0004893964110929853 0.0011089331047034374 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 40824 9015 HSDPMFSSY True H1975_Epitope_Rep2 1069.41749598617 1069.41638993586 39.627 2 0.19350608378528342 0.0004893964110929853 0.0011089862262291725 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3'] 44086 20535 IIMLEALERV True PC9_epitope_Rep4 1185.67913040245 1185.6780299358602 87.138 2 0.19350318997330665 0.0004893964110929853 0.0011090601673523122 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 78282 17656 NYIGLINRI True PC9_epitope_Rep6 1074.61857875122 1074.61748993586 80.553 2 0.19349998330445103 0.0004893964110929853 0.0011091421081998694 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 21186 6735 ERDM[Oxidation]SNVSL True PC9_epitope_Rep5 1065.47607387189 1065.4749699358601 30.877 2 0.19349944280021508 0.0004893964110929853 0.0011091559204437673 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 74040 8451 NDLAVVDVR True H1975_Epitope_Rep1 999.53490869691 999.53380993586 37.435 2 0.1934949272891179 0.0004893964110929853 0.0011092713182135451 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 9143 19575 AVLDDKLYVV True PC9_epitope_Rep5 1133.63322575585 1133.6321299358601 80.347 2 0.19349340115784155 0.0004893964110929853 0.001109310322532914 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 55052 18356 KYSPFVVSF True PC9_epitope_Rep6 1072.5593325396 1072.55822993586 83.25 2 0.1934921316616646 0.0004893964110929853 0.0011093427689116543 ['ENSG00000086544|ENST00000263370|ITPKC'] 43014 7261 IETIEVM[Oxidation]EDR True H1975_Epitope_Rep3 1249.58601824369 1249.5849299358601 32.902 2 0.19348816099279786 0.0004893964110929853 0.001109444259272227 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 77335 11158 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 47.957 1 0.19348549800214362 0.0004893964110929853 0.0011095123305725192 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 111504 18098 THYDHVLIEL True PC9_epitope_Rep5 1238.6295373577398 1238.62844993586 74.625 2 0.19346713318176484 0.0004893964110929853 0.0011099818856965097 ['ENSG00000076003|ENST00000264156|MCM6'] 96149 15505 RYPDNLKHLYL True PC9_epitope_Rep5 1430.76703389006 1430.7653849037902 64.649 3 0.1934649548477129 0.0004893964110929853 0.0011100375949625455 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59'] 86952 19876 QLVRDLLEV True PC9_epitope_Rep2 1083.62880908175 1083.6277099358601 81.847 2 0.19346120851689286 0.0004893964110929853 0.0011101334111319012 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 65109 20717 LQMEPAAFQAL True PC9_epitope_Rep4 1217.61144476545 1217.61034993586 87.851 2 0.19345221354986614 0.0004893964110929853 0.0011103635003008989 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 96105 10879 RYMPQNPHII True PC9_epitope_Rep2 1267.6495616096697 1267.64791490379 47.163 3 0.19344218902808483 0.0004893964110929853 0.0011106199815856391 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 138420 16140 YHIDVGTQTF True PC9_epitope_Rep4 1179.5560380643099 1179.5549499358601 70.022 2 0.19344138020264418 0.0004893964110929853 0.0011106406782886219 ['ENSG00000118496|ENST00000237281|FBXO30'] 76543 20201 NQITQLESL True PC9_epitope_Rep3 1044.54513902744 1044.5440499358601 82.963 2 0.193438929370299 0.0004893964110929853 0.0011107033939953442 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 35825 12439 GTLDYILQR True NCI_RA007_Epitope_Rep2 1077.5818588893299 1077.5807699358602 52.994 2 0.1934335611442372 0.0004893964110929853 0.0011108407769144695 ['ENSG00000140718|ENST00000471389|FTO'] 142232 19486 YWMHVQNTF True PC9_epitope_Rep1 1224.53861417836 1224.53750993586 79.771 2 0.19343237913016964 0.0004893964110929853 0.001110871029148404 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 139328 21783 YLLDLHSYL True PC9_epitope_Rep5 1135.59136094387 1135.59026993586 88.82 2 0.19343061310932239 0.0004893964110929853 0.001110916229875447 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 134582 18193 VYSFGFERL True PC9_epitope_Rep6 1116.56039516876 1116.55928993586 82.62 2 0.19343019464396366 0.0004893964110929853 0.001110926940629964 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 24360 21303 EYYRGFTLF True PC9_epitope_Rep1 1194.5709598524597 1194.5698699358602 86.769 2 0.1934210775674316 0.0004893964110929853 0.001111160320821795 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 142405 18872 YYEYNHDLF True PC9_epitope_Rep3 1262.5244035828598 1262.5233099358602 77.813 2 0.1934130520045597 0.0004893964110929853 0.0011113658009812711 ['ENSG00000151748|ENST00000324679|SAV1'] 33294 7568 GKMERQVFL True NCI_RA007_Epitope_Rep4 1106.5906497512199 1106.58954993586 35.759 2 0.19341167609207185 0.0004893964110929853 0.0011114010325815249 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 111224 5925 THISSQNSEL True PC9_epitope_Rep5 1114.52546621202 1114.52436993586 27.785 2 0.19341070380783765 0.0004893964110929853 0.0011114259295564206 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 90854 9499 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 41.506 3 0.1933992396501287 0.0004893964110929853 0.0011117195307940126 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 78511 15389 NYPETLGRLLI True NCI_RA007_Epitope_Rep5 1287.7186867153098 1287.7175899358601 65.896 2 0.1933981887879902 0.0004893964110929853 0.0011117464476455468 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 27671 10041 FPGQLNADLR True H1975_Epitope_Rep3 1129.5880068989297 1129.5869099358601 43.658 2 0.19338895342053375 0.0004893964110929853 0.0011119830310616587 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 44365 7711 ILELAGNAAR True H1975_Epitope_Rep1 1026.5821932425 1026.58108993586 34.623 2 0.19338232279278192 0.0004893964110929853 0.0011121529197102174 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 76408 11402 NQDDSILKV True PC9_epitope_Rep6 1030.5294889632999 1030.52838993586 54.916 2 0.19336933778204074 0.0004893964110929853 0.0011124856945144757 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 91557 14223 RIIDVVYNA True PC9_epitope_Rep6 1061.58694426977 1061.58584993586 66.596 2 0.1933668196867225 0.0004893964110929853 0.0011125502388394783 ['ENSG00000142937|ENST00000396651|RPS8'] 74971 8331 NHNSQVWRV True PC9_epitope_Rep5 1138.5631891334199 1138.56154490379 36.985 3 0.19336241953836542 0.0004893964110929853 0.0011126630333398648 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 95113 11412 RVDPIGPLSY True H1975_Epitope_Rep3 1115.59750895347 1115.59640993586 49.012 2 0.19336106463626732 0.0004893964110929853 0.0011126977675472052 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 78347 15067 NYKDLNGNVF True PC9_epitope_Rep5 1182.5669371011797 1182.5658499358601 62.962 2 0.19336005378687068 0.0004893964110929853 0.001112723682343642 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 54671 12328 KYLSVQGQLF True NCI_RA007_Epitope_Rep5 1181.64445914589 1181.6433699358602 54.07 2 0.1933566999747029 0.0004893964110929853 0.0011128096672016355 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 76400 13449 NQDDSILKV True PC9_epitope_Rep3 1030.5294889632999 1030.52838993586 56.777 2 0.19334135896119 0.0004893964110929853 0.0011132030642391827 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 11403 11182 DETEFYLGK True NCI_RA007_Epitope_Rep1 1100.50260550912 1100.5015099358602 47.495 2 0.19333886138927808 0.0004893964110929853 0.0011132671238837605 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 93359 10544 RPYQPLPEA True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 45.448 2 0.19333005219790322 0.0004893964110929853 0.0011134930983100894 ['ENSG00000165476|ENST00000373758|REEP3'] 115265 14415 TREGGSIPVTL True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 60.271 2 0.1933262939452943 0.0004893964110929853 0.0011135895194503479 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 93393 8464 RQAPIPAEL True NCI_RA007_Epitope_Rep5 993.5607295219298 993.55962993586 39.239 2 0.19332585780943376 0.0004893964110929853 0.0011136007094258318 ['ENSG00000169583|ENST00000494426|CLIC3'] 72661 4974 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 24.217 2 0.1933170623769046 0.0004893964110929853 0.0011138263986652415 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 88147 14335 QRTDVLTGL True PC9_epitope_Rep5 1001.55055876105 1001.54946993586 60.141 2 0.19331511854143923 0.0004893964110929853 0.0011138762833266989 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 118083 19103 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 81.571 2 0.19331276941969347 0.0004893964110929853 0.0011139365718421297 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 76672 16597 NQSEKIFSL True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 68.664 2 0.19330975315001997 0.0004893964110929853 0.0011140139870259578 ['ENSG00000130818|ENST00000253115|ZNF426'] 92503 7971 RLYDAYELK True NCI_RA007_Epitope_Rep4 1169.6080736371698 1169.6069699358602 37.415 2 0.1933038918667252 0.0004893964110929853 0.001114164437386139 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 41221 16104 HVLDVIHEV True PC9_epitope_Rep5 1059.57129420563 1059.57018993586 66.934 2 0.19330368617446272 0.0004893964110929853 0.0011141697175683634 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 111142 20295 THFLQPIYL True PC9_epitope_Rep2 1130.6124307416198 1130.61132993586 83.486 2 0.19330055212503952 0.0004893964110929853 0.0011142501726632652 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 85235 9907 QEQEWQTVA True H1975_Epitope_Rep2 1117.50400249145 1117.50290993586 43.096 2 0.19329912166476437 0.0004893964110929853 0.0011142868963616133 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 108294 23549 SYIPLFPQL True PC9_epitope_Rep1 1076.5906326678798 1076.5895299358601 95.372 2 0.19329432106169778 0.0004893964110929853 0.001114410149409684 ['ENSG00000165996|ENST00000361271|HACD1'] 87303 10642 QPQPQPYAV True PC9_epitope_Rep4 1026.5134449763398 1026.5123499358601 48.684 2 0.19328892416628418 0.0004893964110929853 0.001114548728284575 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 118491 15865 TYPYLQHEI True PC9_epitope_Rep5 1162.5658744720201 1162.56476993586 66.017 2 0.19328398218245063 0.0004893964110929853 0.0011146756413159785 ['nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 104896 11997 SRDDNM[Oxidation]FQI True PC9_epitope_Rep2 1140.48697290876 1140.4858699358601 51.464 2 0.19327797845725456 0.0004893964110929853 0.0011148298399815603 ['ENSG00000113387|ENST00000265073|SUB1'] 82418 8629 PPPAPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 38.143 2 0.19327468706396966 0.0004893964110929853 0.0011149143846490548 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'DGKK|p.A42P|1|0.95|ENSG00000274588|chrX:50470555-50470555|C/G|missense_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'BOD1L1|p.L1167Ffs*9|1|0.15|ENSG00000038219|chr4:13603380-13603399|AATCTGCTGTGCAAGTTCTC/-|frameshift_variant', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 55008 10903 KYQKGFSLW True NCI_RA007_Epitope_Rep2 1155.6076797143498 1155.60658993586 47.017 2 0.19326569336616856 0.0004893964110929853 0.0011151454348577374 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 134914 15642 VYVVGTAHF True PC9_epitope_Rep1 991.5127167003499 991.51160993586 64.988 2 0.19326211919399994 0.0004893964110929853 0.0011152372695115678 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 49761 18263 KGVDEVTIVNI True PC9_epitope_Rep2 1185.66050313285 1185.6594099358601 75.57 2 0.19325895462895293 0.0004893964110929853 0.0011153185860641628 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 54394 20072 KYFEVPSVL True PC9_epitope_Rep2 1080.5855472874398 1080.5844499358602 82.612 2 0.19325739228900551 0.0004893964110929853 0.001115358734088884 ['ENSG00000131966|ENST00000254286|ACTR10'] 35993 9924 GTVYEDLRY True H1975_Epitope_Rep1 1114.5294889632999 1114.52838993586 43.108 2 0.19325302324672564 0.0004893964110929853 0.0011154710146695228 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C'] 84217 21616 PYLFHVVTF True PC9_epitope_Rep1 1121.59096702105 1121.5898699358602 87.972 2 0.19325214644998112 0.0004893964110929853 0.0011154935489475493 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 141331 8855 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.4284099358601 39.027 2 0.1932462871779109 0.0004893964110929853 0.0011156441479788044 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 78435 20207 NYLSIFRKF True PC9_epitope_Rep3 1186.6498788795 1186.6482449037899 82.984 3 0.19323254820773728 0.0004893964110929853 0.0011159973563734614 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 95155 8034 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67870993586 38.692 2 0.1932250942696514 0.0004893964110929853 0.0011161890329028272 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 88926 18332 QVFPGLLERV True PC9_epitope_Rep6 1156.6604435631998 1156.65934993586 83.156 2 0.19322152387466499 0.0004893964110929853 0.0011162808565897868 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 12089 7409 DHVTATQL True PC9_epitope_Rep3 883.4399456829101 883.43884993586 33.505 2 0.19321362260783573 0.0004893964110929853 0.0011164840888949095 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 118721 16563 TYTSYLDKF True PC9_epitope_Rep6 1136.5389910178399 1136.5378899358602 76.148 2 0.19321308282180566 0.0004893964110929853 0.0011164979743462893 ['ENSG00000069956|ENST00000261845|MAPK6'] 24462 11200 FADQEVRSL True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 50.858 2 0.1932069275395386 0.0004893964110929853 0.0011166563250228875 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 35995 10087 GTVYEDLRY True H1975_Epitope_Rep3 1114.5294889632999 1114.52838993586 43.839 2 0.19319976152889845 0.0004893964110929853 0.0011168407060498766 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C'] 73831 9155 NALLSLAK True H1975_Epitope_Rep3 828.50690304392 828.50580993586 40.204 2 0.1931884446313945 0.0004893964110929853 0.0011171319513261144 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 6898 3608 AQIENSAAVQK True NCI_RA007_Epitope_Rep4 1157.6040508858898 1157.6029499358601 19.937 2 0.19318193288440144 0.0004893964110929853 0.001117299568482429 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 111019 8682 THDDSHLVSL True PC9_epitope_Rep4 1122.5305515924601 1122.5294499358602 40.887 2 0.1931682477164452 0.0004893964110929853 0.0011176519169671714 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 108129 19877 SYDPTIENTF True PC9_epitope_Rep5 1185.51898384925 1185.51788993586 81.509 2 0.19316293670355247 0.0004893964110929853 0.0011177886882534677 ['ENSG00000106615|ENST00000262187|RHEB'] 40876 7961 HSEYHTLLY True H1975_Epitope_Rep3 1161.54547338061 1161.54436993586 35.594 2 0.1931491593292705 0.0004893964110929853 0.0011181435668422863 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant'] 69806 14433 LVGIDIFTGK True H1975_Epitope_Rep1 1061.61209638845 1061.61098993586 60.712 2 0.1931489964441556 0.0004893964110929853 0.001118147763124361 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 121572 7894 VFEDAAEIR True H1975_Epitope_Rep1 1048.5189242795998 1048.5178299358602 35.317 2 0.19313713646117986 0.0004893964110929853 0.0011184533450468858 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 11684 15776 DGTGVVEFVR True PC9_epitope_Rep3 1077.5454733806098 1077.54436993586 65.84 2 0.19313637133143466 0.0004893964110929853 0.001118473062100444 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 71902 6895 MEQELAHAV True H1975_Epitope_Rep3 1026.4804305958999 1026.47932993586 31.481 2 0.19313616937999464 0.0004893964110929853 0.001118478266357456 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 47722 20172 IYDKFIAQL True PC9_epitope_Rep5 1109.6120963884498 1109.61098993586 82.64 2 0.19313512034752137 0.0004893964110929853 0.0011185053001508312 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 77750 12724 NTPEYMEKI True PC9_epitope_Rep5 1123.52196105471 1123.5208699358602 53.95 2 0.19312874026391008 0.0004893964110929853 0.001118669730394062 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 15858 8274 EDFSETLTR True H1975_Epitope_Rep1 1096.50366813828 1096.50256993586 36.759 2 0.19312803003980553 0.0004893964110929853 0.0011186880360926632 ['ENSG00000044574|ENST00000324460|HSPA5'] 5019 20897 ALIEKLVEL True PC9_epitope_Rep5 1026.63249747986 1026.6314099358601 85.435 2 0.1931263755788127 0.0004893964110929853 0.0011187306802262554 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 139281 20450 YLKDLIEEV True PC9_epitope_Rep5 1120.6015912743999 1120.6004899358602 83.697 2 0.1931239806930033 0.0004893964110929853 0.0011187924118767343 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.Y333_K335dup|1|0.36|ENSG00000128272|chr22:39522540-39522541|-/AGTACCTGA|inframe_insertion'] 68161 8512 LTDRELEEY True H1975_Epitope_Rep2 1166.54553295026 1166.54442993586 37.696 2 0.19312123256829586 0.0004893964110929853 0.0011188632529800298 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 86574 17738 QLEDELVSLQK True PC9_epitope_Rep3 1300.6874461566802 1300.68634993586 73.426 2 0.1931197224487844 0.0004893964110929853 0.0011189021827252568 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 68009 12971 LTDHTVTFLQY True H1975_Epitope_Rep2 1336.66631678928 1336.66520993586 55.008 2 0.1931194200994102 0.0004893964110929853 0.0011189099772279136 ['ENSG00000182173|ENST00000333213|TSEN54', 'nc|ENSG00000182173|Q7Z6J9-2|TSEN54'] 35459 6855 GSHSMRYFYT True NCI_RA007_Epitope_Rep3 1247.5393424543497 1247.5382499358602 34.075 2 0.19311266717281747 0.0004893964110929853 0.0011190840804305067 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 30233 18919 FYTVIPHNF True PC9_epitope_Rep4 1136.5654805492 1136.5643899358602 80.858 2 0.1931087114152753 0.0004893964110929853 0.0011191860799485245 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 142616 11716 YYMIGEQKF True NCI_RA007_Epitope_Rep5 1177.5477818797299 1177.54668993586 51.72 2 0.1931068771131579 0.0004893964110929853 0.0011192333807358804 ['ENSG00000166741|ENST00000299964|NNMT'] 28184 21600 FRDYFPIQL True PC9_epitope_Rep5 1197.6182443980497 1197.6171499358602 88.124 2 0.19309459170967985 0.0004893964110929853 0.0011195502336930113 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 43725 9821 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 45.42 2 0.1930904160758446 0.0004893964110929853 0.0011196579479846858 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 9329 5756 AVQTAAKELLK True NCI_RA007_Epitope_Rep3 1170.6972229947398 1170.69556490379 29.622 3 0.19308839084815987 0.0004893964110929853 0.0011197101943263444 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP', 'ENST00000460963.5_1_2:220250088-220252486:-|nuORF', 'ENST00000430206.5_1_2:220251659-220252065:-|nuORF', 'ENST00000523527.5_1_2:220250965-220252516:-|nuORF'] 90943 7289 REYQELM[Oxidation]SV True H1975_Epitope_Rep2 1169.5386741284499 1169.5375699358601 32.975 2 0.19308738727871122 0.0004893964110929853 0.0011197360850779038 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 108705 11730 SYREDPIVY True PC9_epitope_Rep4 1140.5451390274397 1140.5440499358601 52.881 2 0.19308104707786522 0.0004893964110929853 0.0011198996676695214 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 62462 17623 LLIDDKGTIKL True PC9_epitope_Rep2 1227.74383883399 1227.74218490379 73.066 3 0.19307643112619668 0.0004893964110929853 0.0011200187782350905 ['ENSG00000170312|ENST00000395284|CDK1'] 24879 15401 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 71.393 2 0.19305697218665918 0.0004893964110929853 0.001120521038690845 ['ENSG00000204592|ENST00000376630|HLA-E'] 9823 18514 AYLEAIHNF True PC9_epitope_Rep3 1076.52909504048 1076.5279899358602 76.433 2 0.19304826778186154 0.0004893964110929853 0.0011207457837672068 ['ENSG00000042753|ENST00000263270|AP2S1'] 84291 19740 PYRLIFEKF True PC9_epitope_Rep1 1211.6702799709099 1211.66863490379 80.757 3 0.19304081119043517 0.0004893964110929853 0.0011209383466287256 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 91345 12969 RGVDLDQLLD True NCI_RA007_Epitope_Rep3 1142.59315184902 1142.5920499358601 58.287 2 0.19303833564227177 0.0004893964110929853 0.0011210022837961169 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000586686.6_1_19:1438424-1438889:+|nuORF', 'ENST00000591032.1_1_19:1438424-1439963:+|nuORF'] 49961 20626 KILSELFTV True PC9_epitope_Rep2 1048.61684741572 1048.61574993586 84.771 2 0.19303461785027237 0.0004893964110929853 0.0011210983118596887 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 137664 15252 YEILTPNSIPK True PC9_epitope_Rep6 1273.69180326113 1273.69070993586 70.776 2 0.19303414173181255 0.0004893964110929853 0.0011211106102746653 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 46629 7516 ITDHLDTQY True H1975_Epitope_Rep3 1104.5087535187201 1104.5076499358602 33.89 2 0.19303346465146065 0.0004893964110929853 0.001121128099884439 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 140236 14664 YQYPVIIHL True H1975_Epitope_Rep1 1144.6280808057597 1144.6269899358601 61.62 2 0.19303311159618913 0.0004893964110929853 0.001121137219736154 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 40468 5873 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 27.986 2 0.1930295477569087 0.0004893964110929853 0.0011212292822516817 ['ENSG00000127948|ENST00000461988|POR'] 77089 11986 NRLLEATSY True PC9_epitope_Rep2 1065.54547338061 1065.54436993586 51.423 2 0.19302133288496723 0.0004893964110929853 0.0011214415209716466 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 94912 18979 RTFDEFQEL True PC9_epitope_Rep1 1183.5509526838698 1183.54984993586 77.788 2 0.19302027434553098 0.0004893964110929853 0.0011214688722346257 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 110214 9710 TEQPPSPLP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 42.333 2 0.1930196082976125 0.0004893964110929853 0.0011214860823772817 ['ENSG00000075568|ENST00000186436|TMEM131'] 118673 15585 TYTDRVFFL True NCI_RA007_Epitope_Rep1 1160.5866099165999 1160.58550993586 64.71 2 0.19299828678766429 0.0004893964110929853 0.001122037153007212 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 85998 11797 QHLQATGVSL True PC9_epitope_Rep1 1052.56145779792 1052.56036993586 50.246 2 0.19299684988699753 0.0004893964110929853 0.0011220743005614941 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 118606 13926 TYSEKTTLF True PC9_epitope_Rep1 1088.5389910178399 1088.5378899358602 58.402 2 0.19299595895865573 0.0004893964110929853 0.0011220973339552986 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 115635 8709 TRVSQINTL True PC9_epitope_Rep2 1030.5771078620598 1030.5760099358602 38.861 2 0.19299191547216446 0.0004893964110929853 0.0011222018771843486 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 128929 11155 VQIEEVRQV True PC9_epitope_Rep1 1098.6033226098998 1098.6022299358601 47.791 2 0.19298849128852547 0.0004893964110929853 0.0011222904161462706 ['ENSG00000143621|ENST00000361891|ILF2'] 17776 18523 EHSLPTLGL True PC9_epitope_Rep3 965.51819600361 965.51708993586 76.466 2 0.19298649514797991 0.0004893964110929853 0.00112234203349421 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 74448 7734 NEVENQILTR True H1975_Epitope_Rep3 1214.6255146064598 1214.62440993586 34.733 2 0.19298442279708558 0.0004893964110929853 0.0011223956240517003 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 90108 7128 REAQSFISA True NCI_RA007_Epitope_Rep4 1007.5036085686298 1007.50250993586 34.037 2 0.1929817082143918 0.0004893964110929853 0.0011224658264701332 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 40511 5248 HRDTTVQTL True PC9_epitope_Rep5 1069.5516213902101 1069.5505299358601 25.204 2 0.19297962923101458 0.0004893964110929853 0.0011225195944925134 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 49202 4651 KEMPTVAQA True NCI_RA007_Epitope_Rep3 973.4902670036098 973.48916993586 25.217 2 0.19296958860828747 0.0004893964110929853 0.0011227793079768016 ['RASL12|p.K239N|1|0.28|ENSG00000103710|chr15:65054983-65054983|C/A|missense_variant', 'nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 68317 7975 LTELETAVR True NCI_RA007_Epitope_Rep1 1030.56587447202 1030.56476993586 35.014 2 0.1929634432898708 0.0004893964110929853 0.0011229382941817365 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF'] 65848 10165 LSDLGRLSY True H1975_Epitope_Rep2 1022.53965972418 1022.53856993586 44.101 2 0.19295862833700236 0.0004893964110929853 0.0011230628781266955 ['ENSG00000083168|ENST00000265713|KAT6A', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF'] 114827 15531 TQLPESTSLRL True PC9_epitope_Rep4 1243.67721582615 1243.67610993586 67.664 2 0.19295787197746941 0.0004893964110929853 0.0011230824497241087 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000567743.5_1_16:66851261-66857485:-|nuORF'] 73232 14485 MSDSYLPSYY True H1975_Epitope_Rep2 1224.5008912569601 1224.49978993586 60.876 2 0.19295665826479597 0.0004893964110929853 0.0011231138565291926 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 76852 17643 NRDELELEL True PC9_epitope_Rep4 1129.5615173675699 1129.5604299358602 75.885 2 0.19295406069260018 0.0004893964110929853 0.0011231810759274226 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 88832 19589 QVAFDFTKV True PC9_epitope_Rep5 1053.54949613189 1053.54838993586 80.401 2 0.1929507413285842 0.0004893964110929853 0.0011232669795660129 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 129082 10149 VQPSKYHFL True PC9_epitope_Rep2 1117.5920296502102 1117.59092993586 44.375 2 0.1929431066962566 0.0004893964110929853 0.001123464585399036 ['ENSG00000177383|ENST00000317897|MAGEF1'] 35485 10179 GSLNWVPVTK True NCI_RA007_Epitope_Rep3 1099.6025943339098 1099.6014899358602 47.126 2 0.1929292307993398 0.0004893964110929853 0.0011238238220303693 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE', 'chr1:206016145-206021049|372|16.44|0.89|4.2|-|ENST00000360218|CTSE,CTSE'] 6687 9965 AQAEVYKEL True PC9_epitope_Rep2 1049.53932537101 1049.53822993586 43.661 2 0.19291647486452287 0.0004893964110929853 0.0011241541652903925 ['ENSG00000169710|ENST00000306749|FASN'] 47726 16929 IYDPNLAFLRF True NCI_RA007_Epitope_Rep3 1367.7237720957498 1367.72266993586 74.456 2 0.1929113216747951 0.0004893964110929853 0.0011242876461940755 ['ENSG00000197943|ENST00000564138|PLCG2'] 106903 11115 SVDPHGFISY True H1975_Epitope_Rep3 1120.5189242796 1120.5178299358602 47.849 2 0.19291015231550812 0.0004893964110929853 0.0011243179378276204 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant'] 112546 12734 TLEEDEEELFK True H1975_Epitope_Rep3 1380.6296564970396 1380.62854993586 54.192 2 0.19290618079626493 0.0004893964110929853 0.0011244208240419244 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 10067 10712 AYSSYVHQY True PC9_epitope_Rep5 1116.48762415132 1116.48652993586 46.194 2 0.19289233385866295 0.0004893964110929853 0.0011247796167818565 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 54926 16862 KYPSPFFVF True NCI_RA007_Epitope_Rep4 1130.5800679841798 1130.5789699358602 73.069 2 0.19288837027694453 0.0004893964110929853 0.001124882339636512 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 75397 19710 NIVDKFVIV True PC9_epitope_Rep4 1045.61718176889 1045.6160899358601 83.937 2 0.19288407261757043 0.0004893964110929853 0.0011249937313026885 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 8765 6029 AVDFAERHGY True H1975_Epitope_Rep2 1163.53597132607 1163.53432490379 28.17 3 0.1928762862638206 0.0004893964110929853 0.001125195575126225 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000528296.5_1_8:146015816-146017457:-|nuORF', 'ENST00000525232.5_1_8:146017155-146017514:-|nuORF', 'ENST00000531767.1_1_8:146017155-146017514:-|nuORF'] 133813 19289 VYFVAPAKF True PC9_epitope_Rep3 1040.5695033004797 1040.56840993586 79.416 2 0.19287286838910703 0.0004893964110929853 0.0011252841873596391 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 142743 15454 YYQHIVTTL True PC9_epitope_Rep5 1136.5866099166 1136.58550993586 64.454 2 0.19285684575296122 0.0004893964110929853 0.001125699685464935 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 89652 13405 QYTQALEKF True PC9_epitope_Rep2 1126.5658744720197 1126.56476993586 56.842 2 0.1928526050662931 0.0004893964110929853 0.0011258096804585573 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 130129 9339 VSDRVTVLY True H1975_Epitope_Rep3 1050.57095985246 1050.5698699358602 40.922 2 0.192851492835903 0.0004893964110929853 0.0011258385312908489 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 36634 21974 GVIDLIFEKA True PC9_epitope_Rep1 1103.62266107215 1103.6215699358602 89.344 2 0.19285084406895947 0.0004893964110929853 0.0011258553604003758 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 15268 6505 EAESSPFVER True H1975_Epitope_Rep3 1149.5302172392899 1149.52912993586 29.991 2 0.19284114078064654 0.0004893964110929853 0.0011261070952227655 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 142878 18261 YYTPITPHL True PC9_epitope_Rep3 1103.56514619603 1103.56404993586 75.449 2 0.19283929668280994 0.0004893964110929853 0.0011261549434937936 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 125027 5550 VIDDTNITR True H1975_Epitope_Rep3 1045.5403880001702 1045.53928993586 26.393 2 0.19282929613122582 0.0004893964110929853 0.00112641446040873 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 91558 9150 RIIEETLALK True NCI_RA007_Epitope_Rep4 1184.71287305888 1184.71176993586 42.036 2 0.1928052447470648 0.0004893964110929853 0.0011270388456523749 ['ENSG00000163466|ENST00000315717|ARPC2', 'ENST00000489598.5_1_2:219082193-219099125:+|nuORF', 'ENST00000491780.5_1_2:219082193-219100082:+|nuORF', 'ENST00000465395.5_1_2:219082193-219103574:+|nuORF'] 134276 5962 VYNNNSSRF True PC9_epitope_Rep1 1099.50467119779 1099.50356993586 27.747 2 0.19280498729379694 0.0004893964110929853 0.0011270455311372999 ['ENSG00000145555|ENST00000513610|MYO10'] 23096 17467 EVIRELAGI True PC9_epitope_Rep2 998.5760452328998 998.57494993586 72.439 2 0.19279749063397084 0.0004893964110929853 0.001127240220046489 ['ENSG00000066654|ENST00000396083|THUMPD1'] 96049 10700 RYLQTLTTI True NCI_RA007_Epitope_Rep3 1107.62880908175 1107.6277099358601 49.134 2 0.19278762590777693 0.0004893964110929853 0.0011274964592311867 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 24327 10352 EYVKQTWNL True NCI_RA007_Epitope_Rep3 1179.59242357303 1179.5913299358601 47.783 2 0.1927873000472683 0.0004893964110929853 0.001127504924550877 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 131422 15087 VTIEDVQKL True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 65.965 2 0.19278334398280955 0.0004893964110929853 0.001127607701678062 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 7175 5388 AQYEEIAQR True NCI_RA007_Epitope_Rep5 1106.5356369728997 1106.53452993586 27.413 2 0.19277525090881098 0.0004893964110929853 0.0011278179860880616 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 17785 15917 EHSLPTLGL True PC9_epitope_Rep6 965.51819600361 965.51708993586 73.511 2 0.19277225725142663 0.0004893964110929853 0.00112789578101561 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 23000 9359 EVFEDAAEIR True H1975_Epitope_Rep1 1177.5615173675699 1177.5604299358602 40.906 2 0.19276835852581622 0.0004893964110929853 0.001127997103641174 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 109693 5425 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44510993586 25.893 2 0.1927638977050487 0.0004893964110929853 0.001128113045558325 ['ENSG00000179409|ENST00000319004|GEMIN4'] 84216 16224 PYLFHVVTF True NCI_RA007_Epitope_Rep5 1121.59096702105 1121.5898699358602 69.15 2 0.1927633544878816 0.0004893964110929853 0.0011281271652201223 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 65758 7531 LSDDLHVERY True H1975_Epitope_Rep2 1245.59896550545 1245.59731490379 33.919 3 0.19276247590873166 0.0004893964110929853 0.0011281500022086457 ['ENSG00000162910|ENST00000336520|MRPL55', 'nc|ENSG00000162910|Q7Z7F7-2|MRPL55'] 77314 10307 NSDPNLHLL True NCI_RA007_Epitope_Rep5 1021.5192586327701 1021.51816993586 46.276 2 0.19276063278398622 0.0004893964110929853 0.0011281979122257178 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 67991 11088 LTDFIREEY True H1975_Epitope_Rep1 1184.57135377528 1184.5702499358601 47.614 2 0.19275900838421706 0.0004893964110929853 0.0011282401384170356 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 18848 9030 ELDPSNTKALY True H1975_Epitope_Rep1 1249.61903224369 1249.61792993586 39.641 2 0.19275659109186957 0.0004893964110929853 0.0011283029787454437 ['ENSG00000171497|ENST00000307720|PPID'] 93463 20063 RQIDQFLVV True PC9_epitope_Rep1 1116.62914343492 1116.6280499358602 81.998 2 0.1927550567522706 0.0004893964110929853 0.001128342867510189 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 104250 11147 SQIDPSSIERA True PC9_epitope_Rep2 1201.5938801250102 1201.59278993586 48.204 2 0.19273634116007585 0.0004893964110929853 0.0011288295371598587 ['ENSG00000100393|ENST00000263253|EP300'] 115444 13357 TRMPDGPVAL True PC9_epitope_Rep4 1055.54336520563 1055.54226993586 59.282 2 0.19272851660239523 0.0004893964110929853 0.0011290330649105851 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54620 12111 KYLDNPNAL True PC9_epitope_Rep3 1046.53965972418 1046.53856993586 51.629 2 0.19272743821802563 0.0004893964110929853 0.0011290611180897832 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 36004 5523 GTYAPAEVPK True NCI_RA007_Epitope_Rep3 1031.5287606873098 1031.52766993586 28.723 2 0.19271742982303594 0.0004893964110929853 0.0011293215106434823 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 84257 22811 PYNDYFEYF True PC9_epitope_Rep5 1256.50260550912 1256.5015099358602 92.736 2 0.19271646246167842 0.0004893964110929853 0.0011293466820754422 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 56278 6490 LDADPSLQR True NCI_RA007_Epitope_Rep1 1013.51417325233 1013.51306993586 29.264 2 0.19269137844410583 0.0004893964110929853 0.0011299995825555238 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 17444 6843 EHDTTEYKL True PC9_epitope_Rep5 1134.51931820242 1134.51766490379 31.292 3 0.19268865647179578 0.0004893964110929853 0.001130070454294517 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 5266 18486 ALPSKLPTF True PC9_epitope_Rep5 972.56441792004 972.56332993586 76.13 2 0.19268670855534176 0.0004893964110929853 0.0011301211747495258 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 28943 7171 FTDPRTM[Oxidation]GY True H1975_Epitope_Rep1 1102.4753455958999 1102.4742499358601 32.604 2 0.19267088938338442 0.0004893964110929853 0.0011305331638252517 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 141440 9024 YTFPNGAKY True H1975_Epitope_Rep3 1059.5025459394699 1059.5014499358601 39.705 2 0.19267014484363154 0.0004893964110929853 0.0011305525580730842 ['nc|ENSG00000188010|Q502X0|MORN2', 'ENSG00000188010|ENST00000644631|MORN2'] 54826 17068 KYPENFFLL True NCI_RA007_Epitope_Rep2 1169.61209638845 1169.61098993586 71.128 2 0.19266772254324616 0.0004893964110929853 0.0011306156580116408 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 31341 5767 GDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1156.47065413828 1156.4695499358602 27.049 2 0.19266706775663187 0.0004893964110929853 0.0011306327155425993 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 88820 6107 QTYVGITEK True NCI_RA007_Epitope_Rep4 1037.5393253710097 1037.53822993586 30.104 2 0.19266582841212032 0.0004893964110929853 0.0011306650018164546 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 27125 21361 FLIQHLPLV True PC9_epitope_Rep5 1078.65390163078 1078.6528099358602 87.224 2 0.19265825409480478 0.0004893964110929853 0.0011308623411202933 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 61376 6616 LITEDVQGK True PC9_epitope_Rep2 1001.5393253710098 1001.53822993586 30.859 2 0.19265668604210426 0.0004893964110929853 0.001130903199074507 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 142336 10053 YYEEQHPEL True PC9_epitope_Rep4 1206.5193182024198 1206.51822993586 46.336 2 0.19265450145633492 0.0004893964110929853 0.0011309601241859745 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 133552 22711 VWSDVTPLTF True PC9_epitope_Rep5 1163.58627556343 1163.5851699358602 92.363 2 0.19264479084728245 0.0004893964110929853 0.0011312131943447851 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 76404 12211 NQDDSILKV True PC9_epitope_Rep4 1030.5294889632999 1030.52897496793 54.789 1 0.19263297543564 0.0004893964110929853 0.001131521194772657 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 137049 13252 YALYDATYETK True PC9_epitope_Rep4 1336.61869789052 1336.6176099358602 58.872 2 0.19263155386063613 0.0004893964110929853 0.0011315582576087821 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 21575 5642 ERQPGAASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 26.527 2 0.1926230062951138 0.0004893964110929853 0.0011317811325926822 ['ENSG00000180921|ENST00000388913|FAM83H'] 113408 7128 TLSDYNIQK True NCI_RA007_Epitope_Rep1 1080.54513902744 1080.5440499358601 31.716 2 0.19261678072684008 0.0004893964110929853 0.0011319434899606207 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000597285.1_1_19:7730614-7730836:+|nuORF', 'ENST00000392399.3_1_2:137087013-137087097:-|nuORF', 'UBC|p.R510L|1|0.8|ENSG00000150991|chr12:124912243-124912243|C/A|missense_variant', 'ENSG00000221983|ENST00000442744|UBA52'] 11745 10098 DHASIQMNV True PC9_epitope_Rep6 1013.46002950449 1013.4589299358599 49.447 2 0.19260955338391952 0.0004893964110929853 0.0011321320020278825 ['ENSG00000171858|ENST00000343986|RPS21'] 84219 21538 PYLFHVVTF True PC9_epitope_Rep3 1121.59096702105 1121.5898699358602 88.142 2 0.19260862088929934 0.0004893964110929853 0.001132156326743212 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 105609 9306 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4603699358602 40.753 2 0.19259639709724874 0.0004893964110929853 0.0011324752406005896 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 48096 6887 IYNGDM[Oxidation]EKI True PC9_epitope_Rep4 1097.50631137101 1097.5052099358602 33.711 2 0.19257118395944758 0.0004893964110929853 0.0011331333258535312 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 54890 16145 KYPLNLYLL True NCI_RA007_Epitope_Rep4 1135.66413196131 1135.66302993586 70.014 2 0.19256811424974815 0.0004893964110929853 0.0011332134741794404 ['ENSG00000155957|ENST00000358230|TMBIM4'] 75665 8609 NLGGGVVTIER True H1975_Epitope_Rep3 1113.61422164677 1113.6131299358601 38.106 2 0.19256781014138097 0.0004893964110929853 0.0011332214145806107 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 106258 15111 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.5586299358602 63.522 2 0.19256164556087338 0.0004893964110929853 0.0011333823864758913 ['ENSG00000131459|ENST00000253778|GFPT2'] 40038 10072 HPTEDLVVSA True PC9_epitope_Rep2 1066.5294889632999 1066.52838993586 44.071 2 0.19255234828226891 0.0004893964110929853 0.001133625203955006 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 22346 5212 ETDRGMSAEY True H1975_Epitope_Rep3 1157.46590273057 1157.46480993586 25.134 2 0.19255172921059424 0.0004893964110929853 0.0011336413741323615 ['ENSG00000100347|ENST00000350028|SAMM50'] 15470 7869 EALQDVEDENQ True H1975_Epitope_Rep1 1288.5419041218 1288.5408099358601 35.218 2 0.1925516170213213 0.0004893964110929853 0.0011336443045454948 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 84866 5504 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 26.183 2 0.192546497804434 0.0004893964110929853 0.0011337780279097925 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 90432 6034 REILVNQTA True NCI_RA007_Epitope_Rep4 1042.5771078620598 1042.5760099358602 29.827 2 0.19254009600870228 0.0004893964110929853 0.001133945276851229 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D', 'ENST00000502526.1_1_4:119659352-119659508:-|nuORF'] 72775 15868 MPAFLSRASA True PC9_epitope_Rep1 1049.53280052193 1049.5317099358601 65.845 2 0.19253932589851436 0.0004893964110929853 0.001133965397890777 ['ENST00000603524.5_1_19:35610107-35610293:+|nuORF'] 9818 18542 AYLEAIHNF True PC9_epitope_Rep1 1076.52909504048 1076.5279899358602 76.112 2 0.19253587470573438 0.0004893964110929853 0.0011340555732629286 ['ENSG00000042753|ENST00000263270|AP2S1'] 35965 15122 GTVEIFPIFK True NCI_RA007_Epitope_Rep3 1149.6433965167298 1149.6422899358602 66.983 2 0.192533352790586 0.0004893964110929853 0.0011341214723140497 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 48154 12739 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 53.876 3 0.19253047570310886 0.0004893964110929853 0.0011341966569055192 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 76785 14198 NRAEYYHLL True PC9_epitope_Rep1 1177.58800689893 1177.58635490379 59.435 3 0.19252699168447673 0.0004893964110929853 0.001134287708626716 ['ENSG00000100393|ENST00000263253|EP300'] 141354 5546 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 26.34 2 0.19251891584658942 0.0004893964110929853 0.0011344987916371146 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 57146 5418 LDTNADKQL True NCI_RA007_Epitope_Rep5 1016.51383889916 1016.51274993586 27.529 2 0.19251374243707284 0.0004893964110929853 0.0011346340328369767 ['ENSG00000163220|ENST00000368738|S100A9'] 76288 8219 NPNGPYPYTLK True H1975_Epitope_Rep1 1262.6295373577402 1262.62844993586 36.558 2 0.19251283828148966 0.0004893964110929853 0.0011346576705696437 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000595804.5_1_19:39327364-39328165:-|nuORF'] 2503 5743 AEQMASVQNA True H1975_Epitope_Rep3 1047.46550880775 1047.4644099358602 27.116 2 0.19250773348447728 0.0004893964110929853 0.0011347911367625895 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 140824 5252 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 25.268 2 0.19250665509864784 0.0004893964110929853 0.0011348193334434038 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 118304 20767 TYLSIIHSL True PC9_epitope_Rep1 1045.58079626017 1045.5796899358602 84.708 2 0.19250243475852588 0.0004893964110929853 0.0011349296899266106 ['ENSG00000133030|ENST00000651222|MPRIP'] 95687 13542 RYFENPQVI True PC9_epitope_Rep6 1164.5927579262 1164.5916699358602 63.822 2 0.19249226831964542 0.0004893964110929853 0.0011351955734543642 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 8295 14744 ATIIDILTK True NCI_RA007_Epitope_Rep4 986.60119735158 986.60010993586 64.164 2 0.19248414099680206 0.0004893964110929853 0.0011354081727732784 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 142881 18046 YYTPITPHL True PC9_epitope_Rep5 1103.56514619603 1103.56404993586 74.428 2 0.19247734263540817 0.0004893964110929853 0.0011355860389976582 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 33138 13071 GISRQGIIAV True PC9_epitope_Rep2 1012.6029286870798 1012.60182993586 55.556 2 0.19247719392258128 0.0004893964110929853 0.0011355899300988118 ['ENSG00000005100|ENST00000225296|DHX33'] 77746 12789 NTPEYMEKI True PC9_epitope_Rep1 1123.52196105471 1123.5208699358602 54.067 2 0.1924731164751721 0.0004893964110929853 0.0011356966225425397 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 42006 11464 IDFVGELNDK True H1975_Epitope_Rep1 1148.5713537752797 1148.5702499358601 49.078 2 0.19246785116323364 0.0004893964110929853 0.0011358344120895657 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'nc|ENSG00000274487|A6NEC2|NPEPPSL1', 'nc|ENSG00000274487|A6NEC2-3|NPEPPSL1'] 44158 20758 IITDLLRSV True PC9_epitope_Rep5 1028.62299542532 1028.62188993586 84.898 2 0.1924498952260617 0.0004893964110929853 0.0011363044325322408 ['ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1'] 75042 10255 NHSLVTSDL True PC9_epitope_Rep2 984.4876241513201 984.48652993586 44.778 2 0.1924434732451071 0.0004893964110929853 0.0011364725837373134 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant'] 20745 5240 EQEVNILKK True NCI_RA007_Epitope_Rep1 1099.62372370131 1099.62262993586 24.465 2 0.192443201452252 0.0004893964110929853 0.00113647970082946 ['ENSG00000100345|ENST00000216181|MYH9'] 48391 7159 IYTSSVNRL True NCI_RA007_Epitope_Rep5 1051.56620882519 1051.5651099358602 34.212 2 0.19243703735463794 0.0004893964110929853 0.0011366411241770988 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 134316 14682 VYNSEYYHF True PC9_epitope_Rep4 1220.5138388991602 1220.51274993586 64.409 2 0.19242184423423447 0.0004893964110929853 0.0011370390947609702 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 90259 6263 REEEYYTEP True H1975_Epitope_Rep2 1214.5091474415399 1214.50804993586 29.037 2 0.19241967079055988 0.0004893964110929853 0.0011370960376513727 ['ENSG00000113621|ENST00000358387|TXNDC15', 'nc|ENSG00000113621|Q96J42-2|TXNDC15'] 78151 16980 NYAQVFNKL True PC9_epitope_Rep2 1095.57129420563 1095.57018993586 70.56 2 0.19241912996220648 0.0004893964110929853 0.0011371102074666107 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 8079 10094 ATDRWYDEY True H1975_Epitope_Rep3 1217.49891711101 1217.4978299358602 43.867 2 0.19241174063976005 0.0004893964110929853 0.001137303826986909 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 8506 7371 ATSPALFNR True NCI_RA007_Epitope_Rep4 975.51377932951 975.51268993586 34.993 2 0.19240443152618145 0.0004893964110929853 0.0011374953773475598 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108702 12431 SYREDPIVY True PC9_epitope_Rep2 1140.5451390274397 1140.5440499358601 53.123 2 0.1924014044026565 0.0004893964110929853 0.0011375747188212722 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 68374 9116 LTEQRALLY True H1975_Epitope_Rep2 1105.6131590176099 1105.61206993586 40.018 2 0.19239009708399632 0.0004893964110929853 0.001137871134838877 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2', 'TECPR2|p.N1004Efs*17|1|0.25|ENSG00000196663|chr14:102445878-102445879|-/G|frameshift_variant'] 4233 13761 AIDLFTDAIK True H1975_Epitope_Rep3 1105.60192562757 1105.60082993586 58.232 2 0.19238521613096762 0.0004893964110929853 0.0011379991106468966 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4', 'ENST00000456632.1_1_X:92543289-92543514:-|nuORF', 'nc|ENSG00000212789|Q8NFI4|ST13P5'] 70784 19949 LYANMFERL True PC9_epitope_Rep2 1155.57466533391 1155.5735699358602 82.133 2 0.19237742101745098 0.0004893964110929853 0.0011382035240140376 ['ENSG00000004478|ENST00000001008|FKBP4'] 95413 20435 RWFDKSFTF True PC9_epitope_Rep5 1232.59784330664 1232.5961849037901 83.64 3 0.19237622586993058 0.0004893964110929853 0.0011382348679453082 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 54400 21882 KYFGGVLEYF True PC9_epitope_Rep1 1221.6070110080097 1221.6059099358602 88.982 2 0.19235609624242092 0.0004893964110929853 0.001138762917499426 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 59785 8657 LGEISALTSK True H1975_Epitope_Rep3 1017.57062549929 1017.56952993586 38.295 2 0.1923551106961629 0.0004893964110929853 0.0011387887771043667 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 85774 18042 QHDPETSVLVL True PC9_epitope_Rep3 1236.635016661 1236.6339099358602 74.599 2 0.19235071328132608 0.0004893964110929853 0.0011389041674080642 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 21573 5452 ERQPGAASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 25.805 2 0.19234772849331055 0.0004893964110929853 0.0011389824963766015 ['ENSG00000180921|ENST00000388913|FAM83H'] 118370 14563 TYNPAFSRL True PC9_epitope_Rep5 1067.53999407735 1067.5388899358602 61.015 2 0.19234754175430177 0.0004893964110929853 0.0011389873970964446 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 28505 14370 FSEDGEYFAY True H1975_Epitope_Rep1 1226.4767846840998 1226.4762749679298 60.467 1 0.1923440742309412 0.0004893964110929853 0.0011390784015310835 ['ENSG00000085377|ENST00000652536|PREP'] 115310 13010 TRHPFLTAL True PC9_epitope_Rep2 1054.59236400338 1054.59126993586 55.327 2 0.19232902398303803 0.0004893964110929853 0.001139473476686522 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 30127 21104 FYMDTSHLF True PC9_epitope_Rep5 1159.5008316873098 1159.4997299358602 86.241 2 0.19232440896944908 0.0004893964110929853 0.0011395946502023003 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 89596 16965 QYNTYPIKL True PC9_epitope_Rep5 1138.60225998074 1138.60116993586 70.275 2 0.1923190258550614 0.0004893964110929853 0.0011397360075844837 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 133788 17506 VYEYVVERF True PC9_epitope_Rep4 1202.5971746002995 1202.5960699358602 75.341 2 0.19231689449788752 0.0004893964110929853 0.0011397919806148847 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 86177 10559 QIFNGTFVK True NCI_RA007_Epitope_Rep1 1052.5654805492 1052.5643899358602 45.057 2 0.19231582025741872 0.0004893964110929853 0.001139820193024249 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 8230 7836 ATGDVALLR True NCI_RA007_Epitope_Rep4 914.5185303567799 914.51742993586 36.84 2 0.19229255716636062 0.0004893964110929853 0.0011404313154123572 ['ENSG00000100605|ENST00000267615|ITPK1'] 110669 15078 TGAAPIIDVVR True PC9_epitope_Rep2 1110.6397081186199 1110.6386099358601 63.256 2 0.19229126631859894 0.0004893964110929853 0.0011404652356574476 ['ENSG00000166441|ENST00000314138|RPL27A'] 4144 8686 AHTAEVNCL True PC9_epitope_Rep3 956.43856578392 956.43746993586 38.359 2 0.19227051636721829 0.0004893964110929853 0.0011410106312475308 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 16016 8234 EDTEEYNLR True PC9_epitope_Rep1 1167.5043964142699 1167.50328993586 36.505 2 0.19226348929386142 0.0004893964110929853 0.0011411953914288492 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 84329 11088 PYTKVEESF True PC9_epitope_Rep2 1098.5233409536997 1098.5222499358601 47.976 2 0.19225240499383492 0.0004893964110929853 0.0011414868877183083 ['ENSG00000182858|ENST00000330817|ALG12'] 78420 12365 NYLSHHLTI True PC9_epitope_Rep2 1096.5665431783602 1096.5654499358602 52.871 2 0.19224899606680765 0.0004893964110929853 0.0011415765511124164 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 73821 18962 NALDKVLSV True PC9_epitope_Rep1 957.54949613189 957.54838993586 77.721 2 0.19224852975165385 0.0004893964110929853 0.0011415888169282846 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 71927 15196 MEQPLDLTHIV True H1975_Epitope_Rep2 1294.65912323386 1294.6580299358602 63.607 2 0.19224567307341614 0.0004893964110929853 0.0011416639610321926 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 74504 12905 NFGIGQDIQPK True PC9_epitope_Rep4 1215.62478633047 1215.62368993586 57.519 2 0.19224324112685065 0.0004893964110929853 0.0011417279365994028 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 106948 5932 SVEAAAELSAK True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 27.888 2 0.1922416238671492 0.0004893964110929853 0.0011417704827425133 ['ENSG00000159335|ENST00000309083|PTMS'] 134828 22023 VYVDDIYVI True PC9_epitope_Rep2 1097.56447748969 1097.5633899358602 90.183 2 0.19224062687113033 0.0004893964110929853 0.0011417967120588794 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 114608 7754 TQDPTVTRL True PC9_epitope_Rep4 1029.5454733806098 1029.54436993586 37.218 2 0.19223915527639013 0.0004893964110929853 0.00114183542838676 ['ENSG00000130827|ENST00000369682|PLXNA3'] 112785 20965 TLIDLPGITKV True PC9_epitope_Rep1 1168.70672504928 1168.70562993586 85.465 2 0.19223855403508375 0.0004893964110929853 0.0011418512468810277 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3'] 48142 20242 IYPHGLVLL True PC9_epitope_Rep2 1023.61170246563 1023.61060993586 83.281 2 0.1922249647240946 0.0004893964110929853 0.0011422088365516773 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 54251 18464 KWNPTAGVAF True PC9_epitope_Rep1 1089.56072952193 1089.5596299358601 75.813 2 0.19222412809427156 0.0004893964110929853 0.0011422308553312003 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 76561 19884 NQLDGIHLL True PC9_epitope_Rep5 1021.5556441414899 1021.55454993586 81.536 2 0.192223033680858 0.0004893964110929853 0.001142259659211442 ['ENSG00000165819|ENST00000298717|METTL3'] 48336 15614 IYSIDFTRF True NCI_RA007_Epitope_Rep5 1160.5866099165999 1160.58550993586 66.767 2 0.1922201224454553 0.0004893964110929853 0.0011423362835978356 ['ENSG00000175970|ENST00000344651|UNC119B'] 106304 9377 STFQQM[Oxidation]WISK True NCI_RA007_Epitope_Rep3 1270.6016087381797 1270.6005099358601 43.975 2 0.1922187125361297 0.0004893964110929853 0.0011423733945885202 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 1404 4800 AEEEPNRIPS True H1975_Epitope_Rep3 1140.54111627616 1140.54000993586 23.591 2 0.19221797086965453 0.0004893964110929853 0.0011423929168806837 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 131152 5740 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 27.105 2 0.19221000345703598 0.0004893964110929853 0.0011426026577978754 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 108767 19645 SYSPLLREF True PC9_epitope_Rep5 1110.57095985246 1110.5698699358602 80.619 2 0.192205941770763 0.0004893964110929853 0.0011427095959262255 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5', 'LAMA5|p.D641Gfs*42|1|0.13|ENSG00000130702|chr20:62337908-62337909|-/C|frameshift_variant'] 127308 10329 VM[Oxidation]EKSFLEY True H1975_Epitope_Rep2 1160.5423625265598 1160.54126993586 44.739 2 0.1921891945740629 0.0004893964110929853 0.0011431506305912013 ['ENST00000513342.5_1_17:46990150-47004493:+|nuORF', 'nc|ENSG00000159202|Q9H832-2|UBE2Z', 'ENSG00000159202|ENST00000360943|UBE2Z'] 25446 5721 FEEEM[Oxidation]KGIAA True H1975_Epitope_Rep2 1139.5168760547099 1139.5157699358601 27.004 2 0.19218667902725092 0.0004893964110929853 0.0011432168918446915 ['nc|ENSG00000104763|Q13510-3|ASAH1', 'ENST00000523744.2_2_8:17924585-17924894:-|nuORF', 'ENSG00000104763|ENST00000637790|ASAH1', 'nc|ENSG00000104763|Q13510-2|ASAH1'] 76039 14672 NMDNMFESY True H1975_Epitope_Rep2 1149.41069635357 1149.4095899358601 61.596 2 0.1921746129646206 0.0004893964110929853 0.0011435347738739349 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 141316 12547 YTDSSSILNY True H1975_Epitope_Rep3 1161.51898384925 1161.51788993586 53.461 2 0.19216784364574213 0.0004893964110929853 0.001143713151290939 ['ENSG00000111647|ENST00000279907|BLTP3B'] 70506 17814 LVVTNLDKL True PC9_epitope_Rep3 1013.6120963884499 1013.61098993586 73.718 2 0.19215931147889026 0.0004893964110929853 0.0011439380210249766 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 37723 18105 GWEQLLTTIAR True NCI_RA007_Epitope_Rep2 1286.6982856239001 1286.69718993586 75.176 2 0.19215705615595366 0.0004893964110929853 0.0011439974686520242 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 122548 5589 VGEVIVTK True NCI_RA007_Epitope_Rep1 843.50656869075 843.50546993586 25.805 2 0.1921447795220629 0.0004893964110929853 0.0011443211204324151 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 102975 8104 SPFEVSVDK True H1975_Epitope_Rep1 1006.4971262058599 1006.49602993586 36.118 2 0.19213571737388263 0.0004893964110929853 0.0011445600868713428 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 6772 19750 AQDFRVLYV True PC9_epitope_Rep3 1109.58694426977 1109.58584993586 81.196 2 0.19213120804528658 0.0004893964110929853 0.0011446790153118568 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 68169 5088 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 24.653 2 0.192123959143526 0.0004893964110929853 0.0011448702228660805 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 104148 13335 SQESKVLYL True PC9_epitope_Rep2 1065.57062549929 1065.5695299358601 56.566 2 0.1921206507519638 0.0004893964110929853 0.0011449575004474804 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 142331 10685 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 46.413 2 0.19211040206192906 0.0004893964110929853 0.0011452279100899374 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 798 7561 AAYEAELGDAR True NCI_RA007_Epitope_Rep1 1164.54111627616 1164.54000993586 33.402 2 0.19210746157111927 0.0004893964110929853 0.0011453055061752197 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 77097 20957 NRLQYLIDL True PC9_epitope_Rep5 1146.6397081186199 1146.6386099358601 85.671 2 0.19210011586310707 0.0004893964110929853 0.0011454993737839093 ['ENSG00000137547|ENST00000260102|MRPL15', 'MRPL15|p.N170Mfs*106|1|0.14|ENSG00000137547|chr8:54142736-54142736|A/-|frameshift_variant'] 45468 18099 IQLNGRYYL True PC9_epitope_Rep5 1138.61349337078 1138.6123899358602 74.629 2 0.19208781492972715 0.0004893964110929853 0.0011458240931776402 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6'] 40311 9357 HQQSIPAVL True NCI_RA007_Epitope_Rep1 991.5450794577898 991.5439899358599 40.389 2 0.19208649336013042 0.0004893964110929853 0.0011458589853929131 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 69889 11187 LVIIEGDLER True H1975_Epitope_Rep1 1155.6499384491499 1155.6488499358602 47.999 2 0.1920864478861904 0.0004893964110929853 0.0011458601860194757 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF'] 76467 9837 NQGESITHAL True PC9_epitope_Rep1 1068.51998690876 1068.5188899358602 42.699 2 0.19208637192433015 0.0004893964110929853 0.001145862191606742 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 22241 9040 ESYSVYVYK True NCI_RA007_Epitope_Rep5 1136.5389910178399 1136.5378899358602 41.429 2 0.19206115001560214 0.0004893964110929853 0.0011465283091146136 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 37884 11948 GYSEHFVEF True NCI_RA007_Epitope_Rep4 1113.47672511445 1113.47562993586 52.958 2 0.19205983912402028 0.0004893964110929853 0.001146562940732713 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 75141 14098 NHYNNIMAL True PC9_epitope_Rep4 1088.50731405008 1088.5062099358602 62.136 2 0.1920562587511926 0.0004893964110929853 0.001146657533689616 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 95128 19697 RVFIGNLNTL True PC9_epitope_Rep1 1145.65569253593 1145.65458993586 80.59 2 0.19205299266106907 0.0004893964110929853 0.001146743830165824 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 108240 22981 SYIDVLPEF True PC9_epitope_Rep3 1081.53317736141 1081.53208993586 93.663 2 0.19205242033519665 0.0004893964110929853 0.0011467589528030573 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 28610 8724 FSHEEIAM[Oxidation]ATV True NCI_RA007_Epitope_Rep1 1249.5648888762898 1249.56378993586 37.936 2 0.19205200851121956 0.0004893964110929853 0.0011467698346025973 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 108675 18107 SYQKVIELF True PC9_epitope_Rep6 1125.6070110080097 1125.6059099358602 82.285 2 0.19204539418732464 0.0004893964110929853 0.0011469446218736554 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 24878 14778 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 68.804 2 0.19204081154525485 0.0004893964110929853 0.0011470657364619303 ['ENSG00000204592|ENST00000376630|HLA-E'] 77350 5734 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 27.054 2 0.19203817090247657 0.0004893964110929853 0.0011471355317997207 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 54873 19477 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 87.581 2 0.19202937080650992 0.0004893964110929853 0.001147368159574614 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 33565 10006 GLESDVAELR True H1975_Epitope_Rep1 1087.5509526838698 1087.54984993586 43.425 2 0.19202923065724897 0.0004893964110929853 0.0011473718647589857 ['ENSG00000176619|ENST00000325327|LMNB2'] 70974 16259 LYGRNFNYL True PC9_epitope_Rep4 1158.5821932425 1158.58108993586 70.492 2 0.19202600789968594 0.0004893964110929853 0.0011474570694526998 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 38711 19881 HGFAGYFETV True PC9_epitope_Rep3 1126.5083595959 1126.5072699358602 81.711 2 0.1920181276287856 0.0004893964110929853 0.0011476654382744224 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 15034 12492 DYMKTTSNF True PC9_epitope_Rep1 1105.47501086229 1105.47390993586 52.918 2 0.1920171966225178 0.0004893964110929853 0.001147690058294305 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 78154 17742 NYAQVFNKL True PC9_epitope_Rep5 1095.57129420563 1095.57018993586 73.263 2 0.19201714198214428 0.0004893964110929853 0.0011476915032495596 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 24869 15712 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 68.362 2 0.19200541601944138 0.0004893964110929853 0.0011480016365160045 ['ENSG00000204592|ENST00000376630|HLA-E'] 114594 9269 TQDGTWRTV True PC9_epitope_Rep5 1062.50942222506 1062.50832993586 40.603 2 0.1919987207652739 0.0004893964110929853 0.0011481787531429579 ['ENSG00000170779|ENST00000336219|CDCA4'] 142533 12197 YYITTRVQF True NCI_RA007_Epitope_Rep4 1189.6131590176099 1189.61206993586 53.91 2 0.19199703763010278 0.0004893964110929853 0.0011482232832043648 ['ENSG00000000938|ENST00000374005|FGR'] 21172 10589 ERDDMIHQL True PC9_epitope_Rep1 1155.5342570739099 1155.5326049037901 45.623 3 0.19199600219301036 0.0004893964110929853 0.001148250678226564 ['ENSG00000155561|ENST00000285968|NUP205'] 116603 22799 TVADVVLWSV True PC9_epitope_Rep2 1087.59136094387 1087.59026993586 93.184 2 0.1919911944414079 0.0004893964110929853 0.0011483778876473585 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 54869 21807 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 88.913 2 0.1919902885344196 0.0004893964110929853 0.0011484018588337787 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 78377 14634 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6075749679298 61.29 1 0.1919853737437211 0.0004893964110929853 0.0011485319177558342 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 85208 8896 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 39.189 2 0.19197912297877287 0.0004893964110929853 0.0011486973515800452 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 117165 17431 TVLEEIGNRV True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 72.05 2 0.19196421227905405 0.0004893964110929853 0.0011490920772181073 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 90534 8229 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64402993586 39.504 2 0.19196302504764212 0.0004893964110929853 0.0011491235122172057 ['ENSG00000127540|ENST00000591899|UQCR11'] 48139 18385 IYPEVVHMF True PC9_epitope_Rep6 1133.5579526406098 1133.55684993586 83.362 2 0.1919511248512846 0.0004893964110929853 0.0011494386481044664 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 12744 9246 DLEGLSQR True PC9_epitope_Rep5 916.46140940348 916.46030993586 40.511 2 0.19194715006107096 0.0004893964110929853 0.001149543926096242 ['ENSG00000100345|ENST00000216181|MYH9'] 42597 6274 IEGEGSVLQAK True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 29.14 2 0.19194648702874031 0.0004893964110929853 0.001149561488394733 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 88831 19285 QVAFDFTKV True PC9_epitope_Rep2 1053.54949613189 1053.54838993586 79.554 2 0.19194346182761304 0.0004893964110929853 0.0011496416228715847 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 29305 16649 FVDDYTVRV True PC9_epitope_Rep1 1112.55022440788 1112.54912993586 68.87 2 0.19194143972404332 0.0004893964110929853 0.0011496951894456164 ['ENSG00000115233|ENST00000409682|PSMD14'] 22145 5420 ESSAGGSFTVR True NCI_RA007_Epitope_Rep4 1096.51490152832 1096.51380993586 27.423 2 0.19193942253384053 0.0004893964110929853 0.0011497486283555606 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 21227 7468 ERDPQSPEF True PC9_epitope_Rep4 1103.4883524273098 1103.48724993586 36.08 2 0.19193594169482198 0.0004893964110929853 0.0011498408477493881 ['MSANTD4|p.E277Vfs*13|1|0.06|ENSG00000170903|chr11:106009731-106009743|CCAAGTTCATTTT/-|frameshift_variant', 'ENSG00000170903|ENST00000301919|MSANTD4'] 24850 11241 FAYDGKDYL True NCI_RA007_Epitope_Rep3 1090.4971262058598 1090.4960299358602 51.325 2 0.19192923884459423 0.0004893964110929853 0.001150018450191278 ['ENSG00000204592|ENST00000376630|HLA-E'] 120895 5091 VENIQRVAA True NCI_RA007_Epitope_Rep5 998.5508931142198 998.54978993586 26.281 2 0.19192822717696637 0.0004893964110929853 0.0011500452582875525 ['ENSG00000173801|ENST00000393931|JUP'] 30241 13944 FYVEHPEV True PC9_epitope_Rep5 1018.4759968384599 1018.47488993586 58.656 2 0.19192622381702715 0.0004893964110929853 0.0011500983470049226 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 91546 17098 RIIDVVYNA True PC9_epitope_Rep1 1061.58694426977 1061.58584993586 70.593 2 0.19192241366989676 0.0004893964110929853 0.0011501993220745272 ['ENSG00000142937|ENST00000396651|RPS8'] 68181 7842 LTDRGVMSY True H1975_Epitope_Rep2 1040.49608066004 1040.49498993586 35.114 2 0.19191061119714936 0.0004893964110929853 0.00115051216313685 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 74674 11445 NGNPITIFQER True H1975_Epitope_Rep3 1287.6571490879098 1287.6560499358602 49.143 2 0.19191018164195256 0.0004893964110929853 0.0011505235507076712 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH'] 12715 12954 DLEALLNSK True H1975_Epitope_Rep3 1001.53932537101 1001.53822993586 55.058 2 0.19190408059689304 0.0004893964110929853 0.0011506853025033874 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 137512 6610 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 30.333 2 0.19189427801184086 0.0004893964110929853 0.0011509452378188042 ['ENSG00000127184|ENST00000247655|COX7C'] 117281 9209 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep4 1134.59546072858 1134.5943699358602 43.021 2 0.19189408272934094 0.0004893964110929853 0.0011509504167263008 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 87001 18246 QMISRIEYI True PC9_epitope_Rep1 1151.60088008175 1151.5997899358601 74.974 2 0.19188273870698286 0.0004893964110929853 0.001151251301212971 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 24870 16376 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 70.952 2 0.1918790938960228 0.0004893964110929853 0.001151347991517965 ['ENSG00000204592|ENST00000376630|HLA-E'] 111973 4122 TIQSGEQPYK True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56550993586 22.142 2 0.19187684748502978 0.0004893964110929853 0.0011514075888329686 ['ENSG00000168653|ENST00000372969|NDUFS5'] 9063 16330 AVIDVGINRV True PC9_epitope_Rep1 1054.61349337078 1054.6123899358602 67.632 2 0.19187514775868078 0.0004893964110929853 0.001151452684652458 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 65835 12668 LSDLGISSY True H1975_Epitope_Rep2 953.47057710485 953.47002496793 53.827 1 0.19186632957636232 0.0004893964110929853 0.0011516866702468126 ['ENSG00000165029|ENST00000374736|ABCA1'] 43724 9732 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 45.072 2 0.19186481827407445 0.0004893964110929853 0.0011517267766032815 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 109973 14591 TEIDPINALQA True H1975_Epitope_Rep2 1183.60846755999 1183.60736993586 61.28 2 0.19185307089068318 0.0004893964110929853 0.0011520385718813456 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY', 'ENST00000331585.6_1_2:196447906-196448179:-|nuORF'] 6623 18266 APWKPTWPA True PC9_epitope_Rep1 1052.5443511817998 1052.54324993586 75.05 2 0.1918451620886642 0.0004893964110929853 0.0011522485324358814 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23', 'PRSS23|p.A166Qfs*19|1|0.13|ENSG00000150687|chr11:86808138-86808138|G/-|frameshift_variant'] 1958 5949 AEIPAGPGREP True H1975_Epitope_Rep1 1092.55637241748 1092.55526993586 27.954 2 0.191834813735128 0.0004893964110929853 0.0011525233154371444 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF', 'ENST00000486701.1_1_2:27663271-27663376:+|nuORF'] 74625 16128 NGISDLVKV True PC9_epitope_Rep6 943.53384606775 943.53274993586 74.379 2 0.19182981194823523 0.0004893964110929853 0.0011526561529702486 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 41982 9141 IDEPLEGSEDR True PC9_epitope_Rep5 1258.56772494682 1258.5666299358602 40.106 2 0.19182924580278415 0.0004893964110929853 0.0011526711896369872 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 118644 16209 TYSPALNKMF True PC9_epitope_Rep6 1170.5743309807401 1170.5732299358601 74.701 2 0.1918222273923563 0.0004893964110929853 0.0011528576130122614 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 35842 12554 GTLSGWILSK True NCI_RA007_Epitope_Rep3 1060.59169529704 1060.5905899358602 56.621 2 0.1918195772123917 0.0004893964110929853 0.0011529280150904802 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 132877 20577 VVLPLELKL True PC9_epitope_Rep4 1022.6739683690199 1022.6728699358599 87.302 2 0.19180754638110475 0.0004893964110929853 0.0011532476685484512 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 112499 15710 TLDPQTGLFY True H1975_Epitope_Rep2 1153.5655401188499 1153.56444993586 65.596 2 0.19180427215064103 0.0004893964110929853 0.001153334678675135 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 72307 8304 M[Oxidation]IEPRTLQY True H1975_Epitope_Rep3 1165.58014501761 1165.5790499358602 36.925 2 0.19179188157940616 0.0004893964110929853 0.0011536640080563626 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 7274 12921 ARDFTVSAM True PC9_epitope_Rep3 996.4698659121999 996.46876993586 54.723 2 0.1917915619011846 0.0004893964110929853 0.0011536725060414948 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'EIF4A1|p.H293D|1|0.08|ENSG00000161960|chr17:7577677-7577677|C/G|missense_variant'] 87919 8806 QRLAEPSQL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 39.226 2 0.19178935252929497 0.0004893964110929853 0.001153731239345034 ['ENSG00000173801|ENST00000393931|JUP'] 43442 12735 IGGIGTVPVGR True PC9_epitope_Rep3 1024.6029286870798 1024.60182993586 54.007 2 0.19178719676597358 0.0004893964110929853 0.0011537885504238688 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 89655 12020 QYTQALEKF True PC9_epitope_Rep6 1126.5658744720197 1126.56476993586 57.524 2 0.19178599818936426 0.0004893964110929853 0.0011538204158794763 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 84153 21084 PYFNAPVYL True PC9_epitope_Rep4 1082.5436824754597 1082.5425899358602 89.261 2 0.19177206371083244 0.0004893964110929853 0.0011541909438358307 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 96369 11700 RYVEIVSQF True NCI_RA007_Epitope_Rep5 1139.5975089534697 1139.59640993586 51.657 2 0.19177032292439972 0.0004893964110929853 0.0011542372410006424 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 39155 9226 HHYSGNNIEL True PC9_epitope_Rep5 1182.5417849825 1182.5406899358602 40.434 2 0.1917593005154052 0.0004893964110929853 0.0011545304312076407 ['ENSG00000156482|ENST00000287038|RPL30'] 93358 10451 RPYQPLPEA True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 45.087 2 0.19175722077143048 0.0004893964110929853 0.0011545857596631215 ['ENSG00000165476|ENST00000373758|REEP3'] 90280 8307 REELFIVSK True NCI_RA007_Epitope_Rep4 1119.62880908175 1119.6277099358601 38.765 2 0.19175328862782567 0.0004893964110929853 0.00115469037568575 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 95873 20972 RYLDEINLL True PC9_epitope_Rep1 1147.62372370131 1147.62262993586 85.494 2 0.1917499664883557 0.0004893964110929853 0.0011547787697476191 ['ENSG00000060558|ENST00000262958|GNA15'] 43816 8530 IHSEPLGV True PC9_epitope_Rep4 850.45486747106 850.45376993586 40.288 2 0.19174965883765324 0.0004893964110929853 0.0011547869559287917 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 35148 9178 GQWKKGFVL True NCI_RA007_Epitope_Rep4 1061.6022004110898 1061.6011099358602 42.144 2 0.19174404922026508 0.0004893964110929853 0.0011549362306845874 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 11840 6065 DHHENKYLL True PC9_epitope_Rep2 1167.56727145435 1167.56563490379 28.724 3 0.1917393693335347 0.0004893964110929853 0.001155060779641298 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 8361 16649 ATLKELTSL True PC9_epitope_Rep2 974.56481184286 974.56370993586 69.284 2 0.19173625711947614 0.0004893964110929853 0.0011551436145324973 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 1276 4667 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 23.048 2 0.19172468332546405 0.0004893964110929853 0.0011554517156525462 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 5283 11578 ALQEMVHQV True PC9_epitope_Rep2 1053.52771514149 1053.52660993586 49.86 2 0.19171310631258692 0.0004893964110929853 0.0011557599848949329 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 64849 13461 LQDPNHLTL True PC9_epitope_Rep2 1049.55055876105 1049.54946993586 57.056 2 0.19170861369649117 0.0004893964110929853 0.0011558796351447004 ['ENSG00000188997|ENST00000340067|KCTD21'] 92854 10902 RPFEDQTSL True PC9_epitope_Rep2 1091.52473793603 1091.52364993586 47.254 2 0.1917079853222471 0.0004893964110929853 0.001155896371402965 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 2223 6341 AEMPQNYRP True NCI_RA007_Epitope_Rep4 1104.5022286696399 1104.50112993586 30.995 2 0.19170450554124854 0.0004893964110929853 0.0011559890570565405 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 92082 5489 RKVSINNTGL True NCI_RA007_Epitope_Rep4 1100.63020606408 1100.62910993586 27.7 2 0.19169904331979465 0.0004893964110929853 0.0011561345610025444 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 115194 17159 TRDQFLDTL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 71.259 2 0.19169731923859862 0.0004893964110929853 0.001156180491297788 ['ENSG00000010292|ENST00000315579|NCAPD2'] 138858 13906 YKDGTELEL True PC9_epitope_Rep3 1066.51825557326 1066.51714993586 58.571 2 0.19169612594185853 0.0004893964110929853 0.0011562122823288179 ['ENSG00000143815|ENST00000272163|LBR'] 115583 8405 TRSTFSTNY True PC9_epitope_Rep5 1075.49343780775 1075.4923499358601 37.27 2 0.1916886589477111 0.0004893964110929853 0.001156411233005174 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 124936 16362 VHSEQVFAL True PC9_epitope_Rep3 1028.5290950404797 1028.5279899358602 68.071 2 0.1916831400057972 0.0004893964110929853 0.0011565583018170616 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 25393 15326 FEDDAIQLV True H1975_Epitope_Rep3 1048.50769088956 1048.5065899358601 64.361 2 0.19167875719846883 0.0004893964110929853 0.0011566751082651983 ['ENSG00000085840|ENST00000371568|ORC1'] 29729 11700 FVNDIFER True NCI_RA007_Epitope_Rep1 1038.5134449763398 1038.5123499358601 49.484 2 0.1916757837486947 0.0004893964110929853 0.0011567543605794759 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 62080 7350 LLDVRDRDSY True H1975_Epitope_Rep3 1250.62551460646 1250.62440993586 33.249 2 0.19167075377828913 0.0004893964110929853 0.0011568884383964934 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 12647 14073 DLDGIIAEVK True H1975_Epitope_Rep1 1071.58119018299 1071.58008993586 59.299 2 0.19167063055420053 0.0004893964110929853 0.0011568917232270292 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 77592 17533 NTDSLDWALY True H1975_Epitope_Rep2 1196.5349682665599 1196.5338699358601 72.743 2 0.19166958576018978 0.0004893964110929853 0.0011569195750668754 ['ENSG00000108561|ENST00000225698|C1QBP'] 134179 17511 VYLPNINKI True PC9_epitope_Rep4 1072.62808080576 1072.6269899358601 75.359 2 0.19166181011515063 0.0004893964110929853 0.0011571268772593514 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 105327 17929 SRPPLLGF True PC9_epitope_Rep2 885.50723739709 885.50614993586 74.27 2 0.19165390743406138 0.0004893964110929853 0.0011573376044538364 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 33724 10765 GLIDHQTYL True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 46.369 2 0.1916533009961314 0.0004893964110929853 0.0011573537768799665 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 21805 7438 ERYKEVAEL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 35.961 2 0.19165035975656644 0.0004893964110929853 0.001157432216777576 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 9502 6823 AVVTQVNKV True PC9_epitope_Rep3 956.5654805492 956.56438993586 31.261 2 0.1916466483233377 0.0004893964110929853 0.001157531204572009 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 75070 11324 NHVASDISL True PC9_epitope_Rep1 954.47705946762 954.47596993586 48.436 2 0.19164419425103424 0.0004893964110929853 0.001157596661901506 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 108373 15380 SYLENVDHF True PC9_epitope_Rep6 1122.49818883502 1122.49708993586 71.305 2 0.19164364259124558 0.0004893964110929853 0.0011576113768022782 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 24410 10756 FADDGVKYL True H1975_Epitope_Rep2 1026.5022115863 1026.50110993586 46.402 2 0.1916414417859983 0.0004893964110929853 0.00115767008265917 ['nc|ENSG00000168803|Q6DHV7-3|ADAL', 'ENSG00000168803|ENST00000562188|ADAL', 'ADAL|p.L104I|1|0.38|ENSG00000168803|chr15:43340319-43340319|C/A|missense_variant', 'ADAL|p.L154Sfs*17|1|0.09|ENSG00000168803|chr15:43345887-43345888|TT/-|frameshift_variant', 'ADAL|p.E218Rfs*11|1|0.34|ENSG00000168803|chr15:43348916-43348917|-/A|frameshift_variant', 'nc|ENSG00000168803|Q6DHV7-2|ADAL'] 137425 7970 YEDATKITV True H1975_Epitope_Rep2 1038.5233409537 1038.5222499358601 35.603 2 0.19164030828047987 0.0004893964110929853 0.0011577003197626458 ['ENSG00000132383|ENST00000254719|RPA1'] 138476 14094 YHQPAPIAQL True PC9_epitope_Rep5 1136.5978433066398 1136.59674993586 59.223 2 0.1916385298540023 0.0004893964110929853 0.0011577477622087037 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF'] 29460 13599 FVEPSRQFV True PC9_epitope_Rep2 1107.5712942056298 1107.57018993586 57.597 2 0.19163245393543138 0.0004893964110929853 0.0011579098620196331 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 136769 17375 WYQTKFETL True PC9_epitope_Rep4 1214.5971746002997 1214.5960699358602 74.836 2 0.19161931441359317 0.0004893964110929853 0.0011582604899693168 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 98366 13350 SEYLRYEDTLL True H1975_Epitope_Rep1 1400.6823607762399 1400.6812699358602 56.459 2 0.19161178645918392 0.0004893964110929853 0.001158461421291322 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 138861 12369 YKDGTELEL True PC9_epitope_Rep4 1066.51825557326 1066.51714993586 55.384 2 0.19159553698373977 0.0004893964110929853 0.0011588952610039852 ['ENSG00000143815|ENST00000272163|LBR'] 29367 10236 FVDKNNDLLY True H1975_Epitope_Rep1 1239.61355294043 1239.61244993586 44.316 2 0.19159428342248305 0.0004893964110929853 0.0011589287362156323 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 12432 12865 DIVMTQSPDSL True NCI_RA007_Epitope_Rep3 1204.56455414268 1204.56344993586 57.862 2 0.19159209025445587 0.0004893964110929853 0.0011589873051023613 ['nc|ENSG00000211598|P06312|IGKV4-1'] 54420 12741 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64755490379 57.349 3 0.19158459229427086 0.0004893964110929853 0.0011591875616917173 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 140927 11628 YSELGHPFGY True H1975_Epitope_Rep2 1168.5189242795998 1168.5178299358602 49.796 2 0.19156562228372298 0.0004893964110929853 0.0011596943703829998 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 95877 20893 RYLDEINLL True PC9_epitope_Rep5 1147.62372370131 1147.62262993586 85.419 2 0.19154755920718858 0.0004893964110929853 0.0011601771556444976 ['ENSG00000060558|ENST00000262958|GNA15'] 33188 9585 GIYAYGFEK True NCI_RA007_Epitope_Rep3 1046.50729696674 1046.5061899358602 44.786 2 0.19154486342748422 0.0004893964110929853 0.0011602492250314324 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000465222.1_1_3:186502277-186502505:+|nuORF', 'ENST00000485101.5_1_3:186501384-186502505:+|nuORF', 'ENST00000486805.5_1_3:186501384-186502505:+|nuORF', 'ENST00000584054.5_1_17:7476159-7478064:+|nuORF', 'ENST00000467585.1_1_3:186502182-186503751:+|nuORF', 'ENST00000575957.1_1_17:78115565-78120760:-|nuORF', 'ENST00000582848.5_1_17:7476159-7480015:+|nuORF', 'ENST00000584901.5_1_17:7476159-7480015:+|nuORF', 'nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 107254 15010 SVKNGFLTI True PC9_epitope_Rep6 977.55458151233 977.55348993586 69.763 2 0.19153528571924003 0.0004893964110929853 0.001160505313256722 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 131148 5857 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 27.516 2 0.1915352679265179 0.0004893964110929853 0.0011605057890502635 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 134282 15389 VYNPELDKW True PC9_epitope_Rep4 1162.5658744720197 1162.56476993586 67.127 2 0.19153327080381805 0.0004893964110929853 0.0011605591951675616 ['ENSG00000178502|ENST00000319121|KLHL11'] 9820 17647 AYLEAIHNF True PC9_epitope_Rep2 1076.52909504048 1076.5279899358602 73.159 2 0.1915227736560225 0.0004893964110929853 0.0011608399454848442 ['ENSG00000042753|ENST00000263270|AP2S1'] 90532 9397 RELVKNWVP True NCI_RA007_Epitope_Rep2 1139.64512785223 1139.64402993586 41.161 2 0.19152256034399012 0.0004893964110929853 0.0011608456513043867 ['ENSG00000127540|ENST00000591899|UQCR11'] 142688 7252 YYPTEDVPR True H1975_Epitope_Rep1 1138.5294889632999 1138.52838993586 32.904 2 0.1915125322280017 0.0004893964110929853 0.0011611139221083873 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 78337 19369 NYIVPDKQIF True PC9_epitope_Rep1 1235.6550238295897 1235.65392993586 79.311 2 0.19150938005430465 0.0004893964110929853 0.0011611982614739334 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 91548 15758 RIIDVVYNA True PC9_epitope_Rep2 1061.58694426977 1061.58584993586 65.881 2 0.1915050010608155 0.0004893964110929853 0.0011613154357484785 ['ENSG00000142937|ENST00000396651|RPS8'] 90652 10483 REPYELTVPA True H1975_Epitope_Rep2 1173.60298825673 1173.60188993586 45.341 2 0.19150114588953235 0.0004893964110929853 0.0011614186032621382 ['ENSG00000157110|ENST00000397323|RBPMS', 'nc|ENSG00000157110|Q93062-2|RBPMS', 'nc|ENSG00000157110|Q93062-3|RBPMS'] 53813 12203 KTEDPDLPAFY True H1975_Epitope_Rep1 1294.6081332068197 1294.60702993586 51.959 2 0.1914962483486314 0.0004893964110929853 0.0011615496786861292 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 93597 8279 RQPDSGISSI True PC9_epitope_Rep2 1058.5356369729 1058.53452993586 37.203 2 0.19149585043358341 0.0004893964110929853 0.001161560328944179 ['ENSG00000163902|ENST00000296255|RPN1'] 1747 7337 AEGQRLFSA True H1975_Epitope_Rep2 977.4930438849299 977.49194993586 33.162 2 0.19148356196429925 0.0004893964110929853 0.0011618892799408794 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'ENST00000569800.5_1_16:69167425-69171817:+|nuORF'] 87713 8428 QRAITGASL True PC9_epitope_Rep1 915.5137793295099 915.51268993586 37.254 2 0.19148105507875973 0.0004893964110929853 0.0011619563984270535 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 10068 8802 AYSSYVHQY True PC9_epitope_Rep6 1116.48762415132 1116.48652993586 43.76 2 0.19147387355532433 0.0004893964110929853 0.0011621486955728099 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 134739 13559 VYTSGVYHI True PC9_epitope_Rep1 1037.51819600361 1037.5170899358602 57.009 2 0.1914708692502479 0.0004893964110929853 0.001162229150267496 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 77068 16847 NRLDSIDPAL True PC9_epitope_Rep5 1112.5825871653199 1112.5814899358602 69.811 2 0.19146927273639852 0.0004893964110929853 0.0011622719068645265 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124359502-124368686:-|nuORF', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 77526 8160 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 36.338 2 0.19146846842528623 0.0004893964110929853 0.0011622934478990408 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 30080 18475 FYISPVNKL True PC9_epitope_Rep3 1079.60153170475 1079.6004299358601 76.272 2 0.19146229526511754 0.0004893964110929853 0.0011624587906047977 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 15303 7504 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep4 1252.5506357944798 1252.5495299358602 36.229 2 0.19146073789114063 0.0004893964110929853 0.0011625005072324933 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 109881 4655 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 23.003 2 0.19146046991601473 0.0004893964110929853 0.0011625076855046746 ['ENSG00000077721|ENST00000371558|UBE2A'] 48879 3307 KEAPPMEKP True NCI_RA007_Epitope_Rep4 1025.52156713189 1025.52046993586 18.446 2 0.19145621823222211 0.0004893964110929853 0.0011626215816619104 ['ENSG00000115268|ENST00000592588|RPS15'] 73250 4399 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 22.03 2 0.19145534630074226 0.0004893964110929853 0.0011626449407657544 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 49196 7894 KEMLPHVGV True H1975_Epitope_Rep2 1008.5426369296399 1008.54152993586 35.31 2 0.19145240095910748 0.0004893964110929853 0.001162723850148869 ['ENSG00000047315|ENST00000314595|POLR2B'] 118524 16417 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 68.149 2 0.19144942292213468 0.0004893964110929853 0.001162803640940794 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 139102 13477 YLDKEDTFFY True H1975_Epitope_Rep3 1339.5972341699498 1339.59612993586 57.114 2 0.19144823709792963 0.0004893964110929853 0.0011628354143555426 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 108931 10927 TADHNLLLYE True H1975_Epitope_Rep3 1187.58225281215 1187.5811499358601 47.117 2 0.19144732721935162 0.0004893964110929853 0.0011628597945707857 ['ENSG00000183751|ENST00000568546|TBL3'] 24433 7149 FADLSEAANR True H1975_Epitope_Rep1 1092.5199869087598 1092.5188899358602 32.522 2 0.19144510051521946 0.0004893964110929853 0.0011629194613158817 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 2325 19046 AEPLEIILHLP True H1975_Epitope_Rep2 1243.71762408615 1243.71652993586 79.065 2 0.19144504854370775 0.0004893964110929853 0.0011629208539807303 ['ENSG00000100138|ENST00000401959|SNU13'] 117965 12528 TYAPAIHQI True PC9_epitope_Rep3 1012.5341804209202 1012.53308993586 53.213 2 0.19141707656151502 0.0004893964110929853 0.0011636706534274737 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 111105 14168 THEDGVLEL True PC9_epitope_Rep2 1011.48728979815 1011.48618993586 59.766 2 0.1914059830890061 0.0004893964110929853 0.0011639681523349145 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 116546 20264 TTVDHFWGL True PC9_epitope_Rep2 1074.51344497634 1074.5123499358601 83.366 2 0.19139860396594335 0.0004893964110929853 0.001164166084008199 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'SUN1|p.D153Y|1|0.2|ENSG00000164828|chr7:843211-843211|G/T|missense_variant', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.E401Kfs*45|1|0.12|ENSG00000164828|chr7:853555-853555|G/-|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 48084 11809 IYNGDMEKI True PC9_epitope_Rep1 1081.51139637101 1081.51028993586 50.291 2 0.1913961869544732 0.0004893964110929853 0.0011642309233208935 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 8222 9241 ATGDMSGLLK True NCI_RA007_Epitope_Rep2 991.5008316873099 991.49972993586 40.556 2 0.19138634894511222 0.0004893964110929853 0.001164494877418879 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 130262 9248 VSGGLEVLAEK True H1975_Epitope_Rep1 1100.607739284 1100.60664993586 40.484 2 0.19138213164653026 0.0004893964110929853 0.001164608046045212 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF', 'nc|ENSG00000248546|O43423|ANP32CP'] 47053 5598 ITSDTSGDFR True NCI_RA007_Epitope_Rep1 1097.4989171110099 1097.4978299358602 25.84 2 0.1913766007053416 0.0004893964110929853 0.0011647564821822892 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 131046 10867 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.48110993586 46.829 2 0.19137105686971861 0.0004893964110929853 0.001164905283409108 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 8257 12898 ATGSWDSFLK True NCI_RA007_Epitope_Rep5 1110.53457434374 1110.53346993586 56.295 2 0.1913679863376728 0.0004893964110929853 0.0011649877072827108 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 2418 9967 AEQFKLIQA True H1975_Epitope_Rep3 1046.5760452329 1046.57494993586 43.372 2 0.19136390874581297 0.0004893964110929853 0.001165097173220882 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 133928 7255 VYIKHPVSL True NCI_RA007_Epitope_Rep1 1054.61751612206 1054.61640993586 32.211 2 0.19135710763748848 0.0004893964110929853 0.0011652797768995987 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 118449 16265 TYPIKTPTF True PC9_epitope_Rep2 1066.5698972233001 1066.5688099358601 67.804 2 0.19135042271299504 0.0004893964110929853 0.0011654592891115415 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 54415 13191 KYFLKPEVL True PC9_epitope_Rep6 1135.6641319613097 1135.66302993586 62.384 2 0.19134720160454838 0.0004893964110929853 0.0011655457963679718 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 29022 11376 FTEPNEISQY True H1975_Epitope_Rep2 1226.54553295026 1226.54442993586 48.807 2 0.19134649940578208 0.0004893964110929853 0.0011655646557274125 ['ENSG00000143155|ENST00000367833|TIPRL'] 5285 12451 ALQEMVHQV True PC9_epitope_Rep3 1053.52771514149 1053.52660993586 52.917 2 0.19133923903503894 0.0004893964110929853 0.0011657596696526334 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 134128 19822 VYLDHAGATLF True PC9_epitope_Rep5 1205.6080736371698 1205.6069699358602 81.291 2 0.1913353371740698 0.0004893964110929853 0.0011658644873509343 ['ENSG00000075643|ENST00000261326|MOCOS'] 140239 14953 YQYPVIIHL True H1975_Epitope_Rep2 1144.6280808057597 1144.6269899358601 62.668 2 0.1913230955774195 0.0004893964110929853 0.0011661934009952778 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 54542 6121 KYINTDAKF True NCI_RA007_Epitope_Rep5 1098.5709598524597 1098.5698699358602 30.225 2 0.1913102688806376 0.0004893964110929853 0.0011665381352379232 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 75094 16491 NHVSSPFEL True PC9_epitope_Rep5 1028.4927095317598 1028.4916099358602 68.432 2 0.19130944588701543 0.0004893964110929853 0.0011665602577553974 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 15310 13145 EAFNMIDQNR True PC9_epitope_Rep5 1236.5557207944798 1236.55462993586 55.567 2 0.1913004698841207 0.0004893964110929853 0.0011668015649247436 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 45514 5757 IQNPTMINK True NCI_RA007_Epitope_Rep5 1057.55901526977 1057.5579099358602 28.831 2 0.19129982534781262 0.0004893964110929853 0.0011668188942995717 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2', 'SP2|p.P373Qfs*22|1|0.12|ENSG00000167182|chr17:47923015-47923015|C/-|frameshift_variant'] 134342 10164 VYPDGIRHI True PC9_epitope_Rep3 1068.5716285587998 1068.5705299358601 44.049 2 0.19129033867396836 0.0004893964110929853 0.0011670739883377819 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 84870 5328 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 25.547 1 0.1912719045452957 0.0004893964110929853 0.001167569836878887 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 43812 9932 IHSEPLGV True PC9_epitope_Rep1 850.45486747106 850.45376993586 43.065 2 0.19126948503458913 0.0004893964110929853 0.0011676349335224513 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 77091 13185 NRLLEATSY True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 55.721 2 0.19126838735581264 0.0004893964110929853 0.0011676644676374712 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 33453 13448 GLAPPQHLIRV True PC9_epitope_Rep2 1199.71387611839 1199.71222490379 57.007 3 0.19126400732725 0.0004893964110929853 0.0011677823240235973 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant'] 137397 8392 YEAADKWVA True H1975_Epitope_Rep2 1051.4974605590298 1051.49636993586 37.233 2 0.19126098615926823 0.0004893964110929853 0.0011678636235814839 ['ENST00000496594.5_1_9:130883426-130884979:-|nuORF', 'ENSG00000148334|ENST00000338961|PTGES2'] 118634 18570 TYSPALNKMF True PC9_epitope_Rep3 1170.5743309807401 1170.5732299358601 76.654 2 0.19125935710082267 0.0004893964110929853 0.001167907463860262 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 31693 6562 GEFVTTVQQR True H1975_Epitope_Rep3 1163.59348620219 1163.5923899358602 30.2 2 0.19123653746855815 0.0004893964110929853 0.001168521746089137 ['nc|ENSG00000014641|P40925-2|MDH1', 'ENSG00000014641|ENST00000233114|MDH1', 'nc|ENSG00000014641|P40925-3|MDH1'] 23062 17791 EVIEKFDYV True PC9_epitope_Rep1 1140.5702911461199 1140.56918993586 73.229 2 0.1912278059229184 0.0004893964110929853 0.001168756876461661 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 68204 5297 LTDTPKATSY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 25.43 2 0.1912276268511465 0.0004893964110929853 0.0011687616991526973 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 88976 8916 QVIGVVLQK True NCI_RA007_Epitope_Rep4 982.6175161220598 982.61640993586 41.127 2 0.19122722376367937 0.0004893964110929853 0.0011687725550199736 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 40483 9311 HRDIYVSTV True PC9_epitope_Rep5 1088.5614577979202 1088.56036993586 40.767 2 0.1912164014656437 0.0004893964110929853 0.00116906405668552 ['ENSG00000132017|ENST00000254337|DCAF15'] 42463 10244 IEEDIRDLAA True H1975_Epitope_Rep2 1143.57716743171 1143.57606993586 44.409 2 0.19121209797878164 0.0004893964110929853 0.001169179992580795 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 134661 17741 VYSQIPAAVKL True PC9_epitope_Rep5 1187.6914093383098 1187.6903099358601 73.258 2 0.19121129991934885 0.0004893964110929853 0.001169201493561477 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 6934 13747 AQIKEMVEL True PC9_epitope_Rep6 1059.56343194387 1059.5623299358601 64.671 2 0.19119366486732248 0.0004893964110929853 0.0011696767108854392 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 141271 8466 YTDKIMTY True H1975_Epitope_Rep2 1033.47903361357 1033.4779299358602 37.516 2 0.19119360392939633 0.0004893964110929853 0.0011696783533347312 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 43974 16523 IIEPSLRQL True PC9_epitope_Rep2 1067.6338944621898 1067.63278993586 68.796 2 0.19119152275139073 0.0004893964110929853 0.0011697344483505938 ['ENSG00000221983|ENST00000442744|UBA52'] 135103 12358 WEEEFIERC True H1975_Epitope_Rep1 1239.5230236838697 1239.52192993586 52.566 2 0.1911909544273956 0.0004893964110929853 0.0011697497671360345 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 115193 18107 TRDQFLDTL True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 74.441 2 0.1911901199336198 0.0004893964110929853 0.0011697722607107983 ['ENSG00000010292|ENST00000315579|NCAPD2'] 97553 5412 SEESARLVAA True H1975_Epitope_Rep3 1031.5247379360299 1031.52364993586 25.879 2 0.19118243132955173 0.0004893964110929853 0.0011699795255522265 ['ENSG00000008869|ENST00000233099|HEATR5B'] 35179 9965 GQYPRALEL True NCI_RA007_Epitope_Rep3 1045.55564414149 1045.5545499358602 46.282 2 0.19117497670403708 0.0004893964110929853 0.001170180518097173 ['ENSG00000167208|ENST00000330943|SNX20'] 78600 19188 NYSNIRFQF True PC9_epitope_Rep2 1187.57235683479 1187.5712499358601 79.179 2 0.19117163521476466 0.0004893964110929853 0.0011702706229859054 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 89194 6035 QVSPEAGVQKV True PC9_epitope_Rep6 1140.6138872935999 1140.61278993586 31.566 2 0.19117137609507245 0.0004893964110929853 0.001170277610565493 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 141349 5242 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 25.23 2 0.191170491097185 0.0004893964110929853 0.0011703014762734893 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 38575 5592 HEVKDNYIP True H1975_Epitope_Rep2 1113.5454733806098 1113.54436993586 26.511 2 0.19116771992572593 0.0004893964110929853 0.0011703762095167033 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 111113 7534 THEEAVTAL True PC9_epitope_Rep2 969.4767251144499 969.47562993586 34.346 2 0.19116175182151351 0.0004893964110929853 0.0011705371742288335 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 95700 21379 RYFLPPYTF True PC9_epitope_Rep3 1202.6124307416196 1202.61132993586 87.534 2 0.1911499491282337 0.0004893964110929853 0.0011708555679984915 ['ENSG00000023608|ENST00000216294|SNAPC1'] 89812 13565 RALNQEQVIAV True PC9_epitope_Rep5 1239.6935345966301 1239.6924299358602 57.2 2 0.19114966718796797 0.0004893964110929853 0.001170863174784063 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 84128 14558 PYAKPIPAQF True PC9_epitope_Rep1 1130.6124307416196 1130.61132993586 60.821 2 0.19114246871348406 0.0004893964110929853 0.0011710574073600833 ['ENSG00000136709|ENST00000322313|WDR33'] 29385 15411 FVDPLVTNY True H1975_Epitope_Rep2 1066.53351171458 1066.53297496793 64.437 1 0.19113410875395317 0.0004893964110929853 0.0011712830202120317 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 104917 16286 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.4909699358602 70.6 2 0.19112024000289615 0.0004893964110929853 0.0011716573966776866 ['ENSG00000113387|ENST00000265073|SUB1'] 78179 16514 NYATRIVTL True PC9_epitope_Rep1 1049.58694426977 1049.58584993586 68.344 2 0.19112008752078938 0.0004893964110929853 0.0011716615134838243 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 52489 7991 KKVYASFAL True NCI_RA007_Epitope_Rep3 1025.5909670210497 1025.5898699358602 38.53 2 0.19111820927465187 0.0004893964110929853 0.0011717122247233084 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 2904 13324 AEWLGVLKA True NCI_RA007_Epitope_Rep5 985.5596668927699 985.55856993586 57.932 2 0.19111381259071292 0.0004893964110929853 0.001171830940503486 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 22296 8485 ETDIVVDHY True H1975_Epitope_Rep2 1089.49785448185 1089.4967499358602 37.589 2 0.1910999443118197 0.0004893964110929853 0.0011722054798180871 ['nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 107409 13187 SVLNLVIVK True NCI_RA007_Epitope_Rep5 983.6379172134699 983.63682993586 57.401 2 0.19109893986956736 0.0004893964110929853 0.0011722326113574719 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 71364 13849 LYRLQFNEF True NCI_RA007_Epitope_Rep3 1228.6240580544797 1228.62296993586 61.805 2 0.1910979856449041 0.0004893964110929853 0.0011722583870253085 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 115639 8308 TRVSQINTL True PC9_epitope_Rep4 1030.5771078620598 1030.5760099358602 39.414 2 0.19109316087588027 0.0004893964110929853 0.001172388723152115 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 133941 11074 VYIKHPVSL True PC9_epitope_Rep3 1054.61751612206 1054.61640993586 47.595 2 0.1910906080577777 0.0004893964110929853 0.0011724576907610113 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 133816 17002 VYFVAPAKF True PC9_epitope_Rep6 1040.5695033004797 1040.56840993586 77.95 2 0.19108258963412708 0.0004893964110929853 0.0011726743450721402 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 84248 18789 PYNDYFEYF True NCI_RA007_Epitope_Rep5 1256.50260550912 1256.5015099358602 79.109 2 0.19107701433079105 0.0004893964110929853 0.001172825010996434 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 87798 8429 QRDQQLEAL True PC9_epitope_Rep4 1099.5621860739097 1099.56108993586 39.886 2 0.19106524804059358 0.0004893964110929853 0.0011731430446671569 ['nc|ENSG00000090615|Q08378-2|GOLGA3', 'GOLGA3|p.E756Sfs*55|1|0.47|ENSG00000090615|chr12:132796055-132796055|C/-|frameshift_variant', 'nc|ENSG00000090615|Q08378-4|GOLGA3', 'ENSG00000090615|ENST00000450791|GOLGA3'] 78314 17003 NYIRITSEI True PC9_epitope_Rep1 1107.59242357303 1107.5913299358601 70.225 2 0.1910550955722335 0.0004893964110929853 0.0011734175274838322 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 88287 12419 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52317496793 52.804 1 0.191053229056593 0.0004893964110929853 0.0011734679977332737 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 97367 10035 SEDLPLNISR True H1975_Epitope_Rep3 1142.59315184902 1142.5920499358601 43.635 2 0.1910530826418664 0.0004893964110929853 0.0011734719568533888 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 107671 5333 SVQSDQGYISR True NCI_RA007_Epitope_Rep5 1238.58912909774 1238.58802993586 27.206 2 0.19104201103886653 0.0004893964110929853 0.0011737713767843861 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 90564 8936 REMEENFAV True NCI_RA007_Epitope_Rep5 1123.49680893603 1123.49570993586 41.033 2 0.19103605862541223 0.0004893964110929853 0.0011739323852469682 ['ENSG00000026025|ENST00000544301|VIM'] 121643 11606 VFIDKQTNL True PC9_epitope_Rep4 1076.5866099166 1076.58550993586 52.403 2 0.19102447504884315 0.0004893964110929853 0.0011742457760663147 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 66597 14735 LSISETYDLK True PC9_epitope_Rep4 1167.6023195503901 1167.6012299358601 64.611 2 0.19102308581482402 0.0004893964110929853 0.0011742833670847271 ['CON__P34955'] 48192 20448 IYPSPTGVLI True PC9_epitope_Rep4 1058.60119735158 1058.60010993586 86.798 2 0.1910202274207775 0.0004893964110929853 0.0011743607156196518 ['ENSG00000174231|ENST00000304992|PRPF8'] 115290 11769 TRFEVQSAV True PC9_epitope_Rep5 1035.5349086969097 1035.53380993586 50.267 2 0.19101857726932114 0.0004893964110929853 0.0011744053712702093 ['ENSG00000166016|ENST00000435224|ABTB2'] 103028 21190 SPFQFTVGP True PC9_epitope_Rep5 978.4810822188999 978.48053496793 86.555 1 0.19101360532738348 0.0004893964110929853 0.0011745399300024174 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 29686 22897 FVLPELPSV True PC9_epitope_Rep1 999.56408356687 999.56298993586 92.871 2 0.19101062117908904 0.0004893964110929853 0.0011746206992722327 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 47897 15041 IYIKHPHLF True PC9_epitope_Rep1 1166.66004964038 1166.6584049037901 62.674 3 0.1910025278990318 0.0004893964110929853 0.0011748397808715766 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 46847 4255 ITITNDQNR True NCI_RA007_Epitope_Rep4 1073.5465360097699 1073.54542993586 22.693 2 0.19098696924001288 0.0004893964110929853 0.0011752610621554975 ['ENSG00000044574|ENST00000324460|HSPA5'] 133603 15413 VYAALQRQLL True PC9_epitope_Rep6 1173.6869926642098 1173.6858899358601 71.443 2 0.19098288816172382 0.0004893964110929853 0.0011753715904485541 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 54379 12665 KYFDEHYEY True PC9_epitope_Rep5 1292.53496826656 1292.53333490379 53.72 3 0.19097988828156545 0.0004893964110929853 0.0011754528431799347 ['ENSG00000123975|ENST00000314355|CKS2'] 23906 21262 EYLADLYHF True PC9_epitope_Rep1 1169.5393253710101 1169.53822993586 86.609 2 0.19097939844330603 0.0004893964110929853 0.0011754661111436555 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 106212 10454 STDWHVVNY True H1975_Epitope_Rep2 1119.49852318819 1119.49742993586 45.226 2 0.19097929535145522 0.0004893964110929853 0.0011754689035517198 ['ENSG00000147251|ENST00000276202|DOCK11'] 141853 12689 YVDIICPHY True H1975_Epitope_Rep2 1121.52156713189 1121.52046993586 53.909 2 0.19097817292012084 0.0004893964110929853 0.001175499306834431 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155100369-155106166:+|nuORF'] 107561 8688 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6336349037902 41.254 3 0.19096884819130858 0.0004893964110929853 0.0011757519161268931 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 136871 7726 YADYSGQQSTY True H1975_Epitope_Rep1 1281.51496109797 1281.5138699358602 34.679 2 0.19096226518537393 0.0004893964110929853 0.0011759302842206283 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 107539 17174 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 71.082 2 0.19096188172723433 0.0004893964110929853 0.0011759406749452957 ['ENSG00000073756|ENST00000367468|PTGS2'] 142847 18972 YYTDIMHTL True PC9_epitope_Rep4 1155.5270464351497 1155.5259499358601 81.065 2 0.19095231727804043 0.0004893964110929853 0.0011761998765896856 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 96029 10075 RYLPQTYVV True NCI_RA007_Epitope_Rep3 1137.61824439805 1137.6171499358602 46.723 2 0.19094143757890616 0.0004893964110929853 0.001176494791850601 ['nc|ENSG00000078596|O43736-2|ITM2A', 'ENST00000469541.5_1_X:78616588-78622401:-|nuORF', 'ENSG00000078596|ENST00000373298|ITM2A'] 82943 4222 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 21.357 3 0.19093084881130848 0.0004893964110929853 0.0011767818920468318 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 54875 19688 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 88.388 2 0.19093066037343218 0.0004893964110929853 0.0011767870019226334 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 49999 11474 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 49.015 2 0.19092677859142906 0.0004893964110929853 0.0011768922692766955 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 142456 13592 YYFPVKNVI True NCI_RA007_Epitope_Rep5 1141.6171817688898 1141.6160899358601 58.968 2 0.19092336834024334 0.0004893964110929853 0.0011769847573045568 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 21579 5407 ERQPGAASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 25.871 2 0.19092255055641033 0.0004893964110929853 0.0011770069371688134 ['ENSG00000180921|ENST00000388913|FAM83H'] 96622 19728 [Acetylation]-SAHLQWMVVR True PC9_epitope_Rep5 1267.64956192597 1267.64846993586 80.93 2 0.19091689993662353 0.0004893964110929853 0.0011771602042556964 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 77691 22842 NTIPLFVQL True PC9_epitope_Rep2 1043.60153170475 1043.6004299358601 93.352 2 0.1909119007306371 0.0004893964110929853 0.0011772958191160867 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 133775 14467 VYERELQTF True PC9_epitope_Rep3 1183.5873381925899 1183.58624993586 60.754 2 0.19090546215009566 0.0004893964110929853 0.0011774705033736216 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 14998 14930 DYKESFNTI True PC9_epitope_Rep2 1115.5135045459901 1115.5124099358602 62.689 2 0.19089748356779884 0.0004893964110929853 0.0011776870052671096 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 106123 9215 STDKAEYTFY True H1975_Epitope_Rep3 1223.53463391339 1223.53352993586 40.437 2 0.1908913825999114 0.0004893964110929853 0.0011778525843028197 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 133654 11224 VYANGIRNI True PC9_epitope_Rep3 1018.5559784946599 1018.55488993586 48.181 2 0.19087786329682932 0.0004893964110929853 0.0011782195786332933 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 127429 9870 VNFTVDQIR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 44.611 2 0.19087757042497103 0.0004893964110929853 0.0011782275301868907 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 27163 18544 FLLDPVKGERL True PC9_epitope_Rep5 1285.73942215989 1285.73776490379 76.353 3 0.1908744438570413 0.0004893964110929853 0.0011783124207418744 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 6770 19776 AQDFRVLYV True PC9_epitope_Rep1 1109.58694426977 1109.58584993586 80.892 2 0.19087106455211422 0.0004893964110929853 0.001178404180345097 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 74763 18032 NHDFQALAL True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 74.152 2 0.19086606966972222 0.0004893964110929853 0.0011785398214840172 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 3820 8281 AGVLAHLEEER True NCI_RA007_Epitope_Rep1 1222.6305999868998 1222.6289549037901 36.211 3 0.19086279144190033 0.0004893964110929853 0.001178628853621599 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 9814 11490 AYLEAIHNF True NCI_RA007_Epitope_Rep3 1076.52909504048 1076.5279899358602 52.309 2 0.19085833805845528 0.0004893964110929853 0.0011787498121655835 ['ENSG00000042753|ENST00000263270|AP2S1'] 76409 11488 NQDDSILKV True PC9_epitope_Rep6 1030.5294889632999 1030.52838993586 55.263 2 0.19084313476546885 0.0004893964110929853 0.001179162843261074 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 136448 17625 WVDVAHLVLY True H1975_Epitope_Rep2 1213.6495445263301 1213.64844993586 73.111 2 0.19084136601173476 0.0004893964110929853 0.0011792109047924421 ['ENSG00000112511|ENST00000374516|PHF1', 'nc|ENSG00000112511|O43189-2|PHF1'] 20043 13094 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 55.491 2 0.19083621413290772 0.0004893964110929853 0.0011793509056181744 ['ENSG00000182195|ENST00000370526|LDOC1'] 67940 11016 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.58167496793 47.335 1 0.1908339263783764 0.0004893964110929853 0.0011794130800331867 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 103162 9890 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 48.542 2 0.19083118609128674 0.0004893964110929853 0.0011794875572733571 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 72227 10533 MHEENVYTV True PC9_epitope_Rep5 1120.4859098991599 1120.48480993586 45.503 2 0.1908295919467443 0.0004893964110929853 0.0011795308861025512 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF'] 87296 11822 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.5123499358601 50.34 2 0.1908294956280866 0.0004893964110929853 0.0011795335040936173 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 84489 14122 QALLDLHAL True NCI_RA007_Epitope_Rep4 992.5654805492001 992.56438993586 61.601 2 0.19082689485761625 0.0004893964110929853 0.0011796041965863903 ['ENSG00000087086|ENST00000331825|FTL'] 23503 19471 EVVERLLSV True PC9_epitope_Rep1 1042.60225998074 1042.60116993586 79.712 2 0.19081423589959476 0.0004893964110929853 0.0011799483450170552 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 69644 7038 LVDQRVAEY True H1975_Epitope_Rep3 1091.56112344475 1091.56002993586 32.036 2 0.19081393453488688 0.0004893964110929853 0.0011799565391923217 ['ENSG00000143157|ENST00000367876|POGK'] 64665 21280 LPVEFTIDA True PC9_epitope_Rep2 1003.52261267771 1003.52207496793 87.316 1 0.19081135552007542 0.0004893964110929853 0.0011800266655278271 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 77696 20952 NTIPLFVQL True PC9_epitope_Rep6 1043.60153170475 1043.6004299358601 93.381 2 0.19080615563431758 0.0004893964110929853 0.0011801680690215353 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 109897 6433 TEFPAKAVA True H1975_Epitope_Rep3 932.4967322830398 932.49562993586 29.721 2 0.1907925935891 0.0004893964110929853 0.0011805369494895716 ['nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A'] 86187 19424 QIFNGTFVKL True PC9_epitope_Rep4 1165.64954452633 1165.64844993586 82.827 2 0.1907917944856374 0.0004893964110929853 0.0011805586882880344 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 91755 7922 RKFLDGNEL True NCI_RA007_Epitope_Rep4 1090.5771078620598 1090.5760099358602 37.216 2 0.19078930191378574 0.0004893964110929853 0.001180626498753457 ['ENSG00000213719|ENST00000375784|CLIC1'] 54716 15407 KYMDINFDF True NCI_RA007_Epitope_Rep4 1191.52704643515 1191.5259499358601 66.934 2 0.19078903587511276 0.0004893964110929853 0.0011806337365713585 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 42676 9807 IEIETPEQA True H1975_Epitope_Rep3 1028.5026055091198 1028.5015099358602 42.749 2 0.19078347635770415 0.0004893964110929853 0.0011807849983498753 ['ENSG00000154767|ENST00000285021|XPC', 'ENST00000455144.6_1_3:14206267-14209863:-|nuORF'] 29562 20676 FVIDLQTRL True PC9_epitope_Rep1 1103.63389446219 1103.63278993586 84.354 2 0.19078233796749364 0.0004893964110929853 0.0011808159737457234 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 14686 19850 DVIEEYFK True PC9_epitope_Rep3 1041.50187723313 1041.5007899358602 81.588 2 0.1907760437022038 0.0004893964110929853 0.001180987254295406 ['ENSG00000112306|ENST00000230050|RPS12'] 134432 19236 VYPNSFFRY True PC9_epitope_Rep2 1191.5712942056298 1191.57018993586 79.365 2 0.19077014731648287 0.0004893964110929853 0.0011811477302817502 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 140947 10066 YSEVYPGQQY True H1975_Epitope_Rep1 1232.5349682665599 1232.5338699358601 43.659 2 0.19076877876703163 0.0004893964110929853 0.00118118497983877 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 8759 9574 AVDEAADALLK True H1975_Epitope_Rep1 1114.5870038394198 1114.5859099358602 41.749 2 0.19075380332834732 0.0004893964110929853 0.0011815926624375145 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF'] 29764 12109 FVNVVPTFGK True NCI_RA007_Epitope_Rep5 1106.6124307416198 1106.61132993586 53.232 2 0.19075136279092997 0.0004893964110929853 0.0011816591155718857 ['ENSG00000149806|ENST00000529639|FAU'] 104362 14307 SQITAIEAQHL True PC9_epitope_Rep2 1209.63535101417 1209.63424993586 60.296 2 0.19074904515810834 0.0004893964110929853 0.0011817222256190875 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 127997 11022 VPIESIERA True PC9_epitope_Rep1 1012.5553097883198 1012.55420993586 47.284 2 0.1907459356441635 0.0004893964110929853 0.001181806904207656 ['ENSG00000167136|ENST00000372642|ENDOG'] 10165 21038 AYVLNIVRF True PC9_epitope_Rep1 1093.62841515893 1093.62730993586 85.753 2 0.19074159684508094 0.0004893964110929853 0.0011819250689769872 ['ATP1B1|p.K203Efs*3|1|0.39|ENSG00000143153|chr1:169130047-169130048|-/G|frameshift_variant', 'nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 17769 18440 EHSLPTLGL True PC9_epitope_Rep1 965.51819600361 965.51708993586 75.72 2 0.1907406323464252 0.0004893964110929853 0.0011819513381684777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 76430 5295 NQELQEINR True H1975_Epitope_Rep3 1142.5679997303398 1142.5669099358602 25.446 2 0.19073261165974714 0.0004893964110929853 0.001182169813150578 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 24596 22631 FAIDPHLLLSV True PC9_epitope_Rep3 1223.69140933831 1223.6903099358601 92.319 2 0.19073104233011004 0.0004893964110929853 0.001182212564758406 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 17803 15251 EHSLVIDTL True PC9_epitope_Rep6 1025.53932537101 1025.53822993586 70.772 2 0.1907281392749269 0.0004893964110929853 0.0011822916537442079 ['ENSG00000143256|ENST00000368010|PFDN2'] 41224 8719 HVLEAQDLIAK True NCI_RA007_Epitope_Rep4 1235.68738658703 1235.68628993586 40.33 2 0.19072038777796177 0.0004893964110929853 0.0011825028565840797 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 21189 10794 ERDMSNVSL True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 46.407 2 0.1907200843749102 0.0004893964110929853 0.0011825111240902826 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 49088 7747 KEIEGIFHA True H1975_Epitope_Rep2 1042.54474510462 1042.54364993586 34.752 2 0.19071697641235166 0.0004893964110929853 0.0011825958170829285 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 71837 18823 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep3 1146.62061316356 1146.6195099358602 78.948 2 0.1907127228431493 0.0004893964110929853 0.0011827117380881055 ['ENSG00000108424|ENST00000290158|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant'] 65017 19640 LQIEDFEARI True PC9_epitope_Rep4 1232.6401020414398 1232.63900993586 83.663 2 0.19070668976394378 0.0004893964110929853 0.0011828761749853 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 43768 17703 IHLIDPNTL True PC9_epitope_Rep4 1034.5760452329 1034.57494993586 76.119 2 0.19070258103699617 0.0004893964110929853 0.0011829881750853445 ['ENSG00000169251|ENST00000351193|NMD3', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 48852 7491 KEAEPIPETV True H1975_Epitope_Rep2 1111.57610480255 1111.5750099358602 33.764 2 0.19068024988700435 0.0004893964110929853 0.0011835970875704875 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6'] 31991 5223 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 25.158 1 0.19067601126369968 0.0004893964110929853 0.0011837126993043787 ['ENSG00000108344|ENST00000264639|PSMD3'] 74621 17866 NGISDLVKV True PC9_epitope_Rep2 943.53384606775 943.53274993586 74.024 2 0.19065586893045824 0.0004893964110929853 0.0011842622518184183 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 54019 6090 KVHVIFNYK True NCI_RA007_Epitope_Rep1 1146.65496425994 1146.65332490379 27.725 3 0.1906353273692022 0.0004893964110929853 0.0011848229601286921 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 37922 8358 GYSFTTTAER True PC9_epitope_Rep6 1131.51965255559 1131.5185499358602 41.803 2 0.19063317621244422 0.0004893964110929853 0.0011848816941118436 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 23080 17953 EVIKELAQI True PC9_epitope_Rep1 1041.6070110080097 1041.60647496793 73.847 1 0.19061768347758562 0.0004893964110929853 0.0011853047853288108 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 134647 21251 VYSQFITQL True PC9_epitope_Rep5 1097.5757108797297 1097.57460993586 86.792 2 0.1906016418699305 0.0004893964110929853 0.0011857430253417822 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 24443 10479 FADLSEAANR True PC9_epitope_Rep3 1092.5199869087598 1092.5188899358602 45.245 2 0.19059882789729982 0.0004893964110929853 0.0011858199168903747 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 54705 11690 KYLYVDKNF True PC9_epitope_Rep2 1188.6179100448796 1188.61627490379 50.295 3 0.19059549193471442 0.0004893964110929853 0.001185911078244076 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 142882 18141 YYTPITPHL True PC9_epitope_Rep5 1103.56514619603 1103.56404993586 74.789 2 0.19059043121872468 0.0004893964110929853 0.001186049385093414 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 139017 16461 YLADIFTKL True H1975_Epitope_Rep2 1082.6011973515801 1082.60010993586 68.535 2 0.19058531487473152 0.0004893964110929853 0.0011861892286691687 ['ENSG00000236287|ENST00000413761|ZBED5'] 103422 7753 SPPPPPPPP True PC9_epitope_Rep4 881.4647038787699 881.46360993586 37.214 2 0.19057963898887026 0.0004893964110929853 0.001186344385387355 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 108371 17896 SYLENVDHF True PC9_epitope_Rep3 1122.49818883502 1122.49708993586 74.038 2 0.19057659553334674 0.0004893964110929853 0.001186427590045005 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 22347 5305 ETDRGMSAEY True H1975_Epitope_Rep3 1157.46590273057 1157.46480993586 25.485 2 0.1905723724999664 0.0004893964110929853 0.0011865430527295655 ['ENSG00000100347|ENST00000350028|SAMM50'] 54049 9093 KVIDPATATSV True PC9_epitope_Rep6 1100.607739284 1100.60664993586 45.06 2 0.19057210077587397 0.0004893964110929853 0.0011865504823706584 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 7468 5781 ASATVAIPK True NCI_RA007_Epitope_Rep4 856.50181766348 856.50072993586 28.859 2 0.19056848540473134 0.0004893964110929853 0.0011866493404293318 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 9844 14293 AYLESFYKF True NCI_RA007_Epitope_Rep3 1166.5648118428599 1166.56370993586 63.543 2 0.19055641126468448 0.0004893964110929853 0.0011869795533931307 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 11045 8256 DATLTALDR True H1975_Epitope_Rep3 974.5032742154599 974.50216993586 36.742 2 0.19055231860332084 0.0004893964110929853 0.0011870915035828327 ['ENSG00000084754|ENST00000380649|HADHA', 'HADHA|p.K390E|1|0.37|ENSG00000084754|chr2:26204114-26204114|T/C|missense_variant'] 78161 19296 NYAQVLDKF True PC9_epitope_Rep3 1096.5553097883198 1096.5542099358602 79.443 2 0.19054433772809148 0.0004893964110929853 0.0011873098419811687 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 84422 8045 QADTTRLEL True NCI_RA007_Epitope_Rep3 1045.54038800017 1045.53928993586 38.732 2 0.19053500384892638 0.0004893964110929853 0.0011875652465407724 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 89276 5796 QVVSPGVYK True NCI_RA007_Epitope_Rep4 975.5389314481898 975.53782993586 28.918 2 0.1905289682750436 0.0004893964110929853 0.0011877304283257235 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B'] 107324 14646 SVLEPPLFLK True NCI_RA007_Epitope_Rep5 1141.6746966450098 1141.67358993586 63.004 2 0.19051550147389093 0.0004893964110929853 0.001188099071232473 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 14651 7387 DVEEGDEKFE True NCI_RA007_Epitope_Rep1 1195.4880776437897 1195.48698993586 32.727 2 0.19051110920367206 0.0004893964110929853 0.0011882193309245028 ['ENSG00000126524|ENST00000246868|SBDS'] 32195 7562 GEWERAAAV True NCI_RA007_Epitope_Rep4 987.4773938207898 987.47628993586 35.734 2 0.19050714730557844 0.0004893964110929853 0.001188327817562938 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS', 'ENST00000493227.1_1_7:7622738-7646720:+|nuORF'] 90672 5616 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 26.604 2 0.1904962559603401 0.0004893964110929853 0.0011886261009049217 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 43981 19138 IIEQEEKIL True PC9_epitope_Rep2 1113.6281403754099 1113.6270499358602 78.984 2 0.1904934209015263 0.0004893964110929853 0.0011887037575128636 ['ENSG00000175820|ENST00000322527|CCDC168'] 23914 12842 EYLDDRNTF True PC9_epitope_Rep4 1171.51456717515 1171.51346993586 57.262 2 0.1904868746763576 0.0004893964110929853 0.0011888830880924434 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.H214R|1|0.61|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant'] 11925 18442 DHMRFISEL True PC9_epitope_Rep1 1146.54917886206 1146.54754490379 75.728 3 0.1904821809812234 0.0004893964110929853 0.0011890116862315018 ['ENSG00000273749|ENST00000617928|CYFIP1'] 35474 4406 GSLASVYHK True NCI_RA007_Epitope_Rep4 960.50288029264 960.50178993586 23.303 2 0.19047130292741504 0.0004893964110929853 0.0011893097774193482 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000588116.1_1_17:33977635-33977996:+|nuORF'] 135059 4635 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 22.929 2 0.19046426407022243 0.0004893964110929853 0.001189502703073977 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 87773 19904 QRDFNMIDL True PC9_epitope_Rep1 1150.54409348162 1150.54298993586 81.378 2 0.19045233881836438 0.0004893964110929853 0.001189829629884532 ['ENSG00000068654|ENST00000263857|POLR1A'] 85209 8992 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 39.542 2 0.19044431428768305 0.0004893964110929853 0.0011900496704297793 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 107955 9065 SVYDSVLQK True NCI_RA007_Epitope_Rep1 1037.5393253710097 1037.53822993586 39.264 2 0.19043937166430353 0.0004893964110929853 0.0011901852223422124 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 40062 8020 HPTWALKEA True PC9_epitope_Rep2 1051.5450794577898 1051.54398993586 36.209 2 0.19043721430714752 0.0004893964110929853 0.001190244392918911 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 121408 10779 VEVTEFEDIK True H1975_Epitope_Rep1 1207.59723416995 1207.59612993586 46.423 2 0.19043551661687871 0.0004893964110929853 0.0011902909581275988 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 142278 13920 YYAEVETRI True PC9_epitope_Rep1 1142.5607890915799 1142.5596899358602 58.379 2 0.19042658535068985 0.0004893964110929853 0.0011905359600301888 ['ENSG00000112685|ENST00000230449|EXOC2'] 97366 9871 SEDLPLNISR True H1975_Epitope_Rep1 1142.59315184902 1142.5920499358601 42.902 2 0.190425964604342 0.0004893964110929853 0.0011905529901820662 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 138316 18370 YHDINVYSL True PC9_epitope_Rep3 1122.53457434374 1122.53346993586 75.87 2 0.19042510935915047 0.0004893964110929853 0.0011905764542006854 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 141703 11966 YTVEDTHYV True PC9_epitope_Rep1 1125.49785448185 1125.4967499358602 50.892 2 0.1904136976567956 0.0004893964110929853 0.0011908895835223688 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 2856 6017 AEVEPTPEA True H1975_Epitope_Rep3 941.4341915961298 941.43364496793 28.157 1 0.19041158579173365 0.0004893964110929853 0.001190947540711893 ['ENSG00000186834|ENST00000332499|HEXIM1'] 11697 10787 DGYEFKFPNR True NCI_RA007_Epitope_Rep1 1271.5934862021898 1271.5918349037902 45.953 3 0.19040853735541718 0.0004893964110929853 0.0011910312057801138 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 112437 8625 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.5120699358602 38.169 2 0.19040090966200177 0.0004893964110929853 0.0011912405754832597 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 2929 7349 AEYVVQQEGA True H1975_Epitope_Rep2 1092.50875351872 1092.5076499358602 33.208 2 0.19039151516165634 0.0004893964110929853 0.0011914984923241754 ['ENSG00000197601|ENST00000354817|FAR1', 'ENST00000524933.1_1_11:13716477-13732426:+|nuORF'] 2531 4074 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 20.796 2 0.19037578347188716 0.0004893964110929853 0.0011919305159071834 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 17424 10584 EHDPVGQMV True PC9_epitope_Rep3 1010.44913046762 1010.44802993586 45.657 2 0.1903716313368036 0.0004893964110929853 0.0011920445680149818 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 137321 9887 YDGIILPGK True H1975_Epitope_Rep1 974.54368247546 974.54258993586 42.964 2 0.19036305190161032 0.0004893964110929853 0.0011922802652122794 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 41054 4853 HTLNQIDSVK True NCI_RA007_Epitope_Rep1 1153.6091362663299 1153.60802993586 22.958 2 0.19035950362113152 0.0004893964110929853 0.0011923777584537068 ['CON__P12763'] 17423 10495 EHDPVGQMV True PC9_epitope_Rep3 1010.44913046762 1010.44802993586 45.308 2 0.19034699045756526 0.0004893964110929853 0.0011927216363616109 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 96135 18720 RYPAIIYNI True PC9_epitope_Rep4 1121.62332977849 1121.62222993586 80.087 2 0.1903357066559572 0.0004893964110929853 0.0011930318150765176 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1'] 88043 14509 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 60.809 2 0.1903343037512754 0.0004893964110929853 0.0011930703849635522 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 9080 8381 AVIGADSVTLK True NCI_RA007_Epitope_Rep3 1072.61282466444 1072.61172993586 40.065 2 0.1903289399840548 0.0004893964110929853 0.0011932178618889548 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 114611 8912 TQDPTVTRL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 39.224 2 0.1903240519350133 0.0004893964110929853 0.0011933522748485807 ['ENSG00000130827|ENST00000369682|PLXNA3'] 30131 20986 FYNLLTRTF True PC9_epitope_Rep3 1173.61824439805 1173.6171499358602 85.999 2 0.19032027552340533 0.0004893964110929853 0.0011934561300818106 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 112788 20886 TLIDLPGITKV True PC9_epitope_Rep5 1168.70672504928 1168.70562993586 85.39 2 0.19031992382725416 0.0004893964110929853 0.0011934658025517576 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3'] 137810 5414 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 25.852 2 0.19031823375689988 0.0004893964110929853 0.0011935122845512147 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 10083 15093 AYTLLLHTW True NCI_RA007_Epitope_Rep4 1116.59678067748 1116.59568993586 65.62 2 0.19031721621762887 0.0004893964110929853 0.0011935402708058822 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 130088 9177 VSDLLHQY True H1975_Epitope_Rep2 973.4868958753302 973.48578993586 40.252 2 0.19031669951996477 0.0004893964110929853 0.0011935544822364716 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 134030 8153 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 40.904 3 0.19030913546382433 0.0004893964110929853 0.0011937625460660328 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 49342 9140 KESDIYIVA True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 40.108 2 0.19030795152603927 0.0004893964110929853 0.0011937951158303686 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 95731 19984 RYGNTPFLF True PC9_epitope_Rep2 1113.56072952193 1113.5596299358601 82.27 2 0.19030634563067983 0.0004893964110929853 0.0011938392949416802 ['ENSG00000188419|ENST00000357749|CHM'] 35463 7072 GSHSMRYFYT True NCI_RA007_Epitope_Rep5 1247.5393424543497 1247.5382499358602 33.883 2 0.19030355293442813 0.0004893964110929853 0.001193916127537042 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 24849 10775 FAYDGKDYL True NCI_RA007_Epitope_Rep3 1090.4971262058598 1090.4960299358602 49.426 2 0.1902895247746485 0.0004893964110929853 0.0011943021449559558 ['ENSG00000204592|ENST00000376630|HLA-E'] 126027 10596 VLDVETGNEY True H1975_Epitope_Rep3 1137.51898384925 1137.51788993586 45.827 2 0.1902789963817024 0.0004893964110929853 0.0011945919403583403 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 44165 19418 IITKDLFQV True PC9_epitope_Rep2 1075.62774645259 1075.62664993586 80.069 2 0.19027046106208453 0.0004893964110929853 0.0011948269279023495 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 114961 18759 TQVTALIKL True PC9_epitope_Rep2 985.61718176889 985.61608993586 77.531 2 0.19026817111346844 0.0004893964110929853 0.0011948899808078856 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 85391 8034 QEVGTSYYA True H1975_Epitope_Rep3 1016.445090633 1016.4445749679301 35.876 1 0.19026231983692568 0.0004893964110929853 0.0011950511087417503 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF'] 6937 16334 AQIKPFYTV True PC9_epitope_Rep1 1065.5858816406098 1065.58478993586 67.647 2 0.19026026616799424 0.0004893964110929853 0.0011951076662553056 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 53800 9364 KTDKTLVLL True NCI_RA007_Epitope_Rep2 1029.6433965167298 1029.6422899358602 41.033 2 0.19025535250743314 0.0004893964110929853 0.0011952429980946488 ['ENSG00000108518|ENST00000225655|PFN1'] 111524 20726 TIAEGLTLAQV True PC9_epitope_Rep2 1114.62338934814 1114.6222899358602 85.16 2 0.19025163702433343 0.0004893964110929853 0.0011953453399810717 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 87985 13077 QRNEVVVEL True PC9_epitope_Rep2 1084.58767254576 1084.58656993586 55.579 2 0.19024991057390198 0.0004893964110929853 0.0011953928975389511 ['ENSG00000186432|ENST00000334256|KPNA4'] 120892 4931 VENIQRVAA True NCI_RA007_Epitope_Rep3 998.5508931142198 998.54978993586 26.388 2 0.19024971949334715 0.0004893964110929853 0.001195398161244004 ['ENSG00000173801|ENST00000393931|JUP'] 121959 21634 VFTEVANLF True PC9_epitope_Rep4 1038.53859709502 1038.53750993586 91.407 2 0.1902398734537346 0.0004893964110929853 0.0011956694220146237 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 28168 9641 FRDQNPEQL True PC9_epitope_Rep3 1145.5465360097699 1145.54542993586 42.032 2 0.1902368227365086 0.0004893964110929853 0.001195753482534775 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 85758 15590 QHDFTSQIF True PC9_epitope_Rep6 1121.51417325233 1121.5130699358601 72.176 2 0.19023592096095865 0.0004893964110929853 0.0011957783315055593 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 142588 18335 YYLTDVDRI True PC9_epitope_Rep2 1156.5764391557198 1156.57534993586 75.856 2 0.19023051285919182 0.0004893964110929853 0.0011959273658850539 ['ENSG00000088256|ENST00000078429|GNA11'] 109702 12432 TEDGDSFLHLA True H1975_Epitope_Rep1 1203.54078192299 1203.53968993586 52.856 2 0.19022401738932848 0.0004893964110929853 0.0011961063901522017 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 33195 19950 GIYTGFIKV True PC9_epitope_Rep3 996.5644179200399 996.56332993586 81.981 2 0.1902233201078821 0.0004893964110929853 0.0011961256098046396 ['ENSG00000153179|ENST00000542104|RASSF3'] 103543 5520 SPRVPNSSV True PC9_epitope_Rep1 941.49304388493 941.49194993586 26.063 2 0.19021978983454108 0.0004893964110929853 0.001196222921931475 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000471232.5_1_2:32750532-32815924:+|nuORF'] 108430 22828 SYLPFTEAF True PC9_epitope_Rep5 1073.5069626135698 1073.5058699358601 92.803 2 0.19021956271407872 0.0004893964110929853 0.0011962291827879333 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 15273 8182 EAESSPFVER True PC9_epitope_Rep2 1149.5302172392899 1149.52912993586 36.829 2 0.19021701513202252 0.0004893964110929853 0.0011962994122895088 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 132456 9792 VVDEDHELIY True H1975_Epitope_Rep1 1230.5768330785402 1230.5757299358602 42.592 2 0.190210927219001 0.0004893964110929853 0.0011964672552654582 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 27973 17073 FQHIDFVTA True PC9_epitope_Rep2 1076.52909504048 1076.5279899358602 70.923 2 0.19020704239804617 0.0004893964110929853 0.0011965743716180126 ['IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 47705 15550 IYAPKLQEF True PC9_epitope_Rep6 1107.59644632431 1107.5953499358602 72.013 2 0.19020543780741875 0.0004893964110929853 0.0011966186178774432 ['ENSG00000175305|ENST00000308108|CCNE2'] 140791 8202 YSDKYFDEHY True H1975_Epitope_Rep2 1365.55134660669 1365.5502499358602 36.502 2 0.1902046668299828 0.0004893964110929853 0.001196639878006528 ['ENSG00000123975|ENST00000314355|CKS2'] 76688 21503 NQSELAVLL True PC9_epitope_Rep5 985.5444107514498 985.54330993586 87.746 2 0.19018403628944622 0.0004893964110929853 0.0011972089172502902 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 108260 16102 SYIEHIFEI True NCI_RA007_Epitope_Rep5 1149.57062549929 1149.5695299358601 68.665 2 0.19018041296900634 0.0004893964110929853 0.001197308885028688 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 21786 17284 ERYFISHVL True PC9_epitope_Rep1 1162.61349337078 1162.6118549037901 71.3 3 0.19017740022581756 0.0004893964110929853 0.001197392013291592 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 4347 19457 AILELDEHL True PC9_epitope_Rep2 1051.55497543515 1051.5538699358601 80.223 2 0.1901677330611283 0.0004893964110929853 0.0011976587908719878 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 135440 11460 WHSDDEPSL True PC9_epitope_Rep2 1084.44615326216 1084.4450499358602 49.4 2 0.19016512237340744 0.0004893964110929853 0.0011977308463061997 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 17779 16974 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.51708993586 73.28 2 0.19016483813803484 0.0004893964110929853 0.001197738691514186 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 23092 15421 EVIKELAQI True PC9_epitope_Rep6 1041.6070110080097 1041.6059099358602 71.473 2 0.19016138717192177 0.0004893964110929853 0.0011978339460737624 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 34765 9588 GQFQGRPVSV True PC9_epitope_Rep5 1073.5617921510898 1073.5606899358602 41.841 2 0.19015472001595995 0.0004893964110929853 0.0011980179963439286 ['ENSG00000261150|ENST00000615648|EPPK1'] 107293 17156 SVLDLSHNQL True PC9_epitope_Rep2 1124.58258716532 1124.5814899358602 71.248 2 0.19014911728927683 0.0004893964110929853 0.001198172684421958 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 1026 8156 AEAEFYRQV True H1975_Epitope_Rep3 1111.5298233164701 1111.5287299358602 36.351 2 0.1901406104773427 0.0004893964110929853 0.001198407590920137 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 65020 20175 LQIEDFEARIA True PC9_epitope_Rep2 1303.67721582615 1303.67610993586 83.017 2 0.1901358153019621 0.0004893964110929853 0.0011985400249013155 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 53052 11739 KPNPNQIISV True PC9_epitope_Rep2 1108.62405805448 1108.62296993586 50.488 2 0.1901290221773761 0.0004893964110929853 0.0011987276637074676 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 47879 20301 IYIDRFEDL True PC9_epitope_Rep1 1182.5920892198599 1182.59098993586 82.916 2 0.19012806798063794 0.0004893964110929853 0.0011987540227651 ['ENSG00000152219|ENST00000282032|ARL14EP'] 130951 4413 VTDKSMVDKY True H1975_Epitope_Rep3 1184.5747249035599 1184.57308490379 22.097 3 0.19010648246379092 0.0004893964110929853 0.0011993504637762083 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 30063 19093 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6171499358602 78.471 2 0.19010311646807182 0.0004893964110929853 0.0011994434982253719 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 53146 16927 KPYNVYITV True PC9_epitope_Rep3 1095.59644632431 1095.5953499358602 70.266 2 0.1901024766799744 0.0004893964110929853 0.0011994611824688549 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 54350 21008 KYEELFPAF True PC9_epitope_Rep5 1142.5648118428596 1142.56370993586 85.864 2 0.19007876702218088 0.0004893964110929853 0.001200116720345192 ['ENSG00000105402|ENST00000263354|NAPA'] 66096 7856 LSEKPTVTTVY True H1975_Epitope_Rep1 1236.6601687796801 1236.65906993586 35.17 2 0.19007839298618462 0.0004893964110929853 0.0012001270647792152 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 48446 14257 IYYTGKYQSL True PC9_epitope_Rep5 1234.6233893481399 1234.6222899358602 59.844 2 0.19007069540144023 0.0004893964110929853 0.001200339970980796 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant', 'MYCBP2|p.K641Gfs*11|1|0.09|ENSG00000005810|chr13:77257813-77257814|-/TTTTTCTTTTTGTTCCT|frameshift_variant'] 73653 20116 MYGDYKYTYW True PC9_epitope_Rep5 1388.5747249035599 1388.57362993586 82.423 2 0.19006654650694976 0.0004893964110929853 0.0012004547402617704 ['ENSG00000155380|ENST00000369626|SLC16A1'] 107006 9933 SVFEDPVISK True NCI_RA007_Epitope_Rep5 1119.58119018299 1119.58008993586 44.85 2 0.19006414968677462 0.0004893964110929853 0.0012005210475953371 ['ENSG00000125445|ENST00000245539|MRPS7'] 74813 9190 NHDTGEYVL True PC9_epitope_Rep6 1046.46688870674 1046.4657899358601 45.481 2 0.19006169004295417 0.0004893964110929853 0.001200589096744644 ['ENSG00000144597|ENST00000396842|EAF1'] 90619 5998 REMQESVQV True H1975_Epitope_Rep3 1104.52335803704 1104.52226993586 28.084 2 0.1900545785693947 0.0004893964110929853 0.0012007858663887906 ['nc|ENSG00000103126|O15169-2|AXIN1', 'ENSG00000103126|ENST00000262320|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 8066 11578 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.4858499358602 49.663 2 0.1900540118527425 0.0004893964110929853 0.001200801548444708 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 85828 14818 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.51274993586 61.997 2 0.19004578977079292 0.0004893964110929853 0.0012010290911525856 ['ENSG00000085872|ENST00000546361|CHERP'] 22237 9217 ESYSVYVYK True NCI_RA007_Epitope_Rep2 1136.5389910178399 1136.5378899358602 40.462 2 0.19004144443223248 0.0004893964110929853 0.0012011493640559738 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 108147 13741 SYFPEITHI True NCI_RA007_Epitope_Rep4 1105.54441075145 1105.5433099358602 60.081 2 0.190037897964942 0.0004893964110929853 0.0012012475342681986 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 118179 19174 TYISWKEEL True PC9_epitope_Rep5 1167.58119018299 1167.58008993586 78.79 2 0.19003155236405847 0.0004893964110929853 0.0012014232077286703 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 107433 19225 SVLQSIEKI True PC9_epitope_Rep3 1015.5913609438699 1015.59026993586 79.169 2 0.19002479595881225 0.0004893964110929853 0.0012016102823310874 ['ENSG00000121931|ENST00000369763|LRIF1'] 106951 6529 SVEAAAELSAK True NCI_RA007_Epitope_Rep1 1074.55570371114 1074.55460993586 29.41 2 0.1900208969183498 0.0004893964110929853 0.0012017182541317324 ['ENSG00000159335|ENST00000309083|PTMS'] 42642 3484 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 18.297 2 0.19001171506189174 0.0004893964110929853 0.0012019725555211332 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 25338 11272 FDVSGYPTLK True NCI_RA007_Epitope_Rep1 1125.57062549929 1125.5695299358601 47.827 2 0.190007228497019 0.0004893964110929853 0.0012020968353836285 ['ENSG00000155660|ENST00000652332|PDIA4'] 54830 15966 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 70.475 2 0.19000594394953552 0.0004893964110929853 0.0012021324202984346 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 115888 5196 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 25.058 3 0.19000529678125005 0.0004893964110929853 0.001202150348746036 ['ENSG00000204560|ENST00000376442|DHX16'] 99421 15791 SHYFQSLEV True PC9_epitope_Rep4 1108.5189242796 1108.5178299358602 68.666 2 0.19000060688604786 0.0004893964110929853 0.0012022802805224631 ['ENSG00000168612|ENST00000372523|ZSWIM1'] 18892 5851 ELDVRDRDGY True H1975_Epitope_Rep2 1236.5734790336 1236.57184490379 27.494 3 0.18999865254519926 0.0004893964110929853 0.0012023344289542686 ['ESPN|p.K847Efs*7|1|0.25|ENSG00000187017|chr1:6460117-6460118|-/T|frameshift_variant', 'ENSG00000187017|ENST00000645284|ESPN'] 41969 5098 IDEM[Oxidation]PEAAVK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 24.723 2 0.18999264420601528 0.0004893964110929853 0.0012025009158161423 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 75612 13340 NLDQPDLYY True H1975_Epitope_Rep2 1139.51350454599 1139.5124099358602 56.444 2 0.18999063899769078 0.0004893964110929853 0.0012025564838756442 ['ENSG00000171853|ENST00000324266|TRAPPC12'] 73318 9303 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 40.742 2 0.18998919364267733 0.0004893964110929853 0.0012025965389532874 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 138082 11970 YGFQNALIVR True H1975_Epitope_Rep3 1179.6400424717897 1179.6389499358602 51.201 2 0.1899807907885811 0.0004893964110929853 0.0012028294334787116 ['CON__P02769'] 26140 15632 FGYPDPTYL True H1975_Epitope_Rep2 1071.49131254943 1071.4907749679298 65.282 1 0.18997256855737257 0.0004893964110929853 0.0012030573656122473 ['ENSG00000178498|ENST00000337737|DTX3', 'nc|ENSG00000178498|Q8N9I9-2|DTX3'] 121640 12318 VFIDKQTNL True PC9_epitope_Rep2 1076.5866099166 1076.58550993586 52.693 2 0.18995481842004108 0.0004893964110929853 0.0012035495727448036 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 26743 5261 FKDLGEEHFK True NCI_RA007_Epitope_Rep3 1248.6138872935996 1248.61225490379 27.698 3 0.18995136221061934 0.0004893964110929853 0.0012036454361014015 ['CON__P02769'] 8123 8725 ATEESDLAQQY True H1975_Epitope_Rep1 1253.54117584581 1253.54067496793 38.488 1 0.18994871932547264 0.0004893964110929853 0.0012037187458065974 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 131000 10204 VTDPSTLEQY True H1975_Epitope_Rep3 1151.53463391339 1151.53352993586 44.295 2 0.18994470398340735 0.0004893964110929853 0.0012038301339943292 ['ENSG00000197081|ENST00000356956|IGF2R'] 26866 7692 FLDESRSTQY True H1975_Epitope_Rep1 1244.567331024 1244.56622993586 34.551 2 0.1899407104934425 0.0004893964110929853 0.0012039409262412123 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 68339 15402 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.5746699358601 64.403 2 0.18993899266017394 0.0004893964110929853 0.0012039885876019524 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 74011 11998 NDEELNKLLGK True PC9_epitope_Rep6 1271.6721304457099 1271.67049490379 57.43 3 0.18992922159611259 0.0004893964110929853 0.001204259722196362 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 4907 22171 ALFPHLLQPVL True PC9_epitope_Rep5 1246.74377926434 1246.7426899358602 90.319 2 0.18992284592677988 0.0004893964110929853 0.0012044366719126032 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 21683 4554 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 24.014 2 0.18992191677846434 0.0004893964110929853 0.001204462461582309 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 77515 10816 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4603699358602 46.633 2 0.18991841242618762 0.0004893964110929853 0.0012045597342301765 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 87472 9676 QQDPQQYNV True PC9_epitope_Rep3 1118.49925146418 1118.49814993586 42.167 2 0.18991626907488468 0.0004893964110929853 0.001204619232546503 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 78414 19003 NYLPQISHL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 78.316 2 0.1899160090854946 0.0004893964110929853 0.0012046264499170096 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 5815 20713 APELLFFAK True PC9_epitope_Rep5 1034.5800679841798 1034.5789699358602 84.731 2 0.18990917171499752 0.0004893964110929853 0.0012048162725964405 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 129699 11602 VRPPVQVY True PC9_epitope_Rep5 956.5443511817998 956.54324993586 49.624 2 0.18989994980831199 0.0004893964110929853 0.0012050723435297083 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 138375 14533 YHGEVPVSL True PC9_epitope_Rep1 999.5025459394699 999.50144993586 60.726 2 0.18989300419353458 0.0004893964110929853 0.0012052652431492291 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 9914 19513 AYLPEWKENI True PC9_epitope_Rep5 1261.6342883850098 1261.6331899358602 80.11 2 0.18989025011300845 0.0004893964110929853 0.0012053417404267479 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 40823 7705 HSDPESDFY True H1975_Epitope_Rep3 1095.41451878071 1095.41397496793 34.621 1 0.18988805457934724 0.0004893964110929853 0.001205402727006604 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 29739 18710 FVNDIFERI True PC9_epitope_Rep6 1151.59750895347 1151.59640993586 84.61 2 0.18988690149743875 0.0004893964110929853 0.0012054347580538506 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 90479 4588 RELEDATETA True H1975_Epitope_Rep2 1133.52004647841 1133.51894993586 22.752 2 0.18988587245670968 0.0004893964110929853 0.0012054633441264686 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 72044 19118 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 79.355 2 0.1898816421632379 0.0004893964110929853 0.0012055808660289798 ['ENSG00000198712|ENST00000361739|MT-CO2'] 44680 14211 ILTDITKGV True PC9_epitope_Rep4 958.5698972233 958.56880993586 62.571 2 0.18988153265097024 0.0004893964110929853 0.001205583908544922 ['ENSG00000167658|ENST00000309311|EEF2'] 15056 15180 DYQALRTSI True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 63.534 2 0.18988125838887676 0.0004893964110929853 0.0012055915282436903 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 73065 15181 MRDPTFVRL True PC9_epitope_Rep3 1133.60154878809 1133.59990490379 63.538 3 0.18986698491425427 0.0004893964110929853 0.001205988148340466 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 22239 8792 ESYSVYVYK True NCI_RA007_Epitope_Rep4 1136.5389910178399 1136.5378899358602 40.629 2 0.18986447694107908 0.0004893964110929853 0.0012060578514402852 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 14418 4357 DTDSEEEIR True NCI_RA007_Epitope_Rep2 1092.45711186868 1092.45600993586 21.584 2 0.18986040798561987 0.0004893964110929853 0.0012061709468921256 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 118258 18654 TYLEKFQNL True PC9_epitope_Rep3 1154.5971746002997 1154.5960699358602 76.972 2 0.18985630870855744 0.0004893964110929853 0.0012062848958766994 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 14438 8979 DTEENKLIY True H1975_Epitope_Rep2 1123.5397192938299 1123.5386299358602 39.492 2 0.18984974612346717 0.0004893964110929853 0.0012064673407352026 ['nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP', 'ENSG00000102931|ENST00000219204|ARL2BP'] 130199 16894 VSEPRYFQL True PC9_epitope_Rep4 1137.5818588893299 1137.5807699358602 72.968 2 0.18984548153223801 0.0004893964110929853 0.001206585914446777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 135058 4540 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 22.572 2 0.1898447049788515 0.0004893964110929853 0.001206607507179841 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 137562 8155 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep2 1078.5004977145798 1078.49940993586 36.318 2 0.1898446797075771 0.0004893964110929853 0.0012066082098758128 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 38500 6314 HERAIDFSP True NCI_RA007_Epitope_Rep3 1070.5145076055 1070.5134099358602 31.838 2 0.1898376407560578 0.0004893964110929853 0.0012068039517485567 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 87469 9545 QQDPQQYNV True PC9_epitope_Rep1 1118.49925146418 1118.49814993586 41.572 2 0.18983664644388681 0.0004893964110929853 0.0012068316045302926 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 37873 19064 GYPLWKVTF True PC9_epitope_Rep6 1109.59096702105 1109.5898699358602 85.974 2 0.18982833671927932 0.0004893964110929853 0.001207062730839152 ['ENSG00000198805|ENST00000361505|PNP'] 115827 8658 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41782993586 38.299 2 0.18982744990620137 0.0004893964110929853 0.00120708739923922 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 42269 17621 IDTIEIITDR True PC9_epitope_Rep4 1187.63976768827 1187.6386699358602 75.8 2 0.18981382534182112 0.0004893964110929853 0.0012074664560723116 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 109628 10588 TEAGMFAIRA True H1975_Epitope_Rep3 1065.5277151414898 1065.52660993586 45.796 2 0.1898127801394652 0.0004893964110929853 0.0012074955401761114 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'PSMC2|p.R400L|1|0.49|ENSG00000161057|chr7:103367951-103367951|G/T|missense_variant', 'nc|ENSG00000161057|P35998-2|PSMC2'] 73906 10599 NAYQRAILL True H1975_Epitope_Rep2 1060.6029286870798 1060.60182993586 45.791 2 0.18981086019303448 0.0004893964110929853 0.00120754896699232 ['ENSG00000198677|ENST00000358746|SKIC3'] 90556 7084 REM[Oxidation]EENFAV True H1975_Epitope_Rep3 1139.49172393603 1139.4906299358602 32.216 2 0.18980980203109313 0.0004893964110929853 0.0012075784137350945 ['ENSG00000026025|ENST00000544301|VIM'] 78355 14741 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6075749679298 61.52 1 0.18980949066351424 0.0004893964110929853 0.001207587078671639 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 140904 13805 YSEEIVEMY True H1975_Epitope_Rep3 1161.4899922200898 1161.48947496793 58.406 1 0.18980738773138114 0.0004893964110929853 0.00120764560204714 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 118683 21030 TYTDRVFFL True PC9_epitope_Rep5 1160.5866099165999 1160.58550993586 85.949 2 0.18980541581203278 0.0004893964110929853 0.0012077004819966884 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 42274 16653 IDTIEIITDR True PC9_epitope_Rep6 1187.63976768827 1187.6386699358602 76.526 2 0.1898001711668501 0.0004893964110929853 0.0012078464564560607 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 126021 17131 VLDSVDVRL True PC9_epitope_Rep2 1014.57095985246 1014.56986993586 71.143 2 0.18979697405379967 0.0004893964110929853 0.0012079354505348246 ['ENSG00000169105|ENST00000306243|CHST14'] 71456 21287 LYTPVLIRF True PC9_epitope_Rep5 1120.66446631448 1120.6633699358601 86.935 2 0.1897948980645005 0.0004893964110929853 0.0012079932407998311 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 45446 12996 IQIM[Oxidation]KVEEI True PC9_epitope_Rep4 1117.60529713629 1117.6041899358602 57.883 2 0.18979476637557352 0.0004893964110929853 0.0012079969067783094 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 108311 6720 SYISRTNQL True NCI_RA007_Epitope_Rep5 1080.5563724174801 1080.55526993586 32.521 2 0.18979170225740727 0.0004893964110929853 0.0012080822093641162 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 95724 9354 RYGLVTNEI True NCI_RA007_Epitope_Rep3 1063.56620882519 1063.5651099358602 43.885 2 0.18978273062265308 0.0004893964110929853 0.0012083320071930872 ['ENSG00000115267|ENST00000649979|IFIH1'] 89669 14678 QYVSAFSKL True PC9_epitope_Rep4 1041.54949613189 1041.54838993586 64.395 2 0.18977858597913547 0.0004893964110929853 0.001208447424268636 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 42766 5026 IEMDSKRVP True H1975_Epitope_Rep3 1073.55392988933 1073.55282993586 24.453 2 0.18977693716003333 0.0004893964110929853 0.0012084933424798307 ['ENSG00000154710|ENST00000284957|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-4|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-3|RABGEF1', 'ENST00000461017.1_1_7:66262359-66272860:+|nuORF'] 2051 7540 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 33.954 2 0.18977285242625522 0.0004893964110929853 0.0012086071063806506 ['ENSG00000173801|ENST00000393931|JUP'] 121017 5695 VEQENHLMAA True H1975_Epitope_Rep3 1140.52335803704 1140.52226993586 26.936 2 0.18976457530495752 0.0004893964110929853 0.0012088376653713187 ['ENSG00000185246|ENST00000355765|PRPF39'] 24847 12112 FAYDGKDYL True NCI_RA007_Epitope_Rep1 1090.4971262058598 1090.4960299358602 51.102 2 0.1897616525327489 0.0004893964110929853 0.0012089190896471984 ['ENSG00000204592|ENST00000376630|HLA-E'] 96052 11007 RYLQTLTTI True NCI_RA007_Epitope_Rep5 1107.62880908175 1107.6277099358601 48.972 2 0.1897609458162428 0.0004893964110929853 0.0012089387785892607 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 118186 14716 TYITSVSRL True PC9_epitope_Rep5 1038.57095985246 1038.5698699358602 61.604 2 0.18976003597890986 0.0004893964110929853 0.001208964126899278 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 36308 8194 GVEGSLIVEK True NCI_RA007_Epitope_Rep2 1029.57062549929 1029.5695299358601 36.508 2 0.1897593561707808 0.0004893964110929853 0.0012089830668823433 ['ENSG00000144381|ENST00000388968|HSPD1'] 87836 17942 QRGEFVVSL True PC9_epitope_Rep1 1033.55564414149 1033.5545499358602 73.806 2 0.18975210189940547 0.0004893964110929853 0.0012091851950501973 ['ENSG00000163214|ENST00000457308|DHX57'] 90516 5431 RELQSQIQEA True NCI_RA007_Epitope_Rep5 1200.60986454232 1200.6087699358602 27.578 2 0.18975018429256438 0.0004893964110929853 0.0012092386316270966 ['ENSG00000179085|ENST00000368400|DPM3', 'nc|ENSG00000179085|Q9P2X0-2|DPM3'] 88250 7184 QSDPTQSGMY True H1975_Epitope_Rep3 1112.44443901 1112.4433499358602 32.608 2 0.18973437341579943 0.0004893964110929853 0.0012096793122610503 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 78450 19032 NYLVLPNRI True PC9_epitope_Rep2 1100.63422881536 1100.63312993586 78.571 2 0.18973125947322125 0.0004893964110929853 0.001209766123021755 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 14334 4179 DSYVGDEAQSK True NCI_RA007_Epitope_Rep4 1197.51496109797 1197.5138699358602 22.376 2 0.1897248577324515 0.0004893964110929853 0.0012099446109258647 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 106731 4389 STVSADPVVK True NCI_RA007_Epitope_Rep5 1001.5393253710099 1001.53822993586 23.508 2 0.18969456229873066 0.0004893964110929853 0.001210789640700396 ['ENSG00000136051|ENST00000332180|WASHC4'] 65264 11242 LQTSIREEI True PC9_epitope_Rep4 1087.5873381925899 1087.58624993586 51.017 2 0.18969154125881368 0.0004893964110929853 0.001210873938929758 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 139090 8857 YLDESKQLY True H1975_Epitope_Rep2 1157.56045473841 1157.5593499358602 39.035 2 0.18968419527723515 0.0004893964110929853 0.001211078943639878 ['ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B'] 115296 13834 TRGQIQVIL True PC9_epitope_Rep4 1026.6185787512197 1026.61748993586 61.11 2 0.18967557114799682 0.0004893964110929853 0.001211319662095524 ['ENSG00000167900|ENST00000301634|TK1'] 107782 16967 SVTDLAFKV True PC9_epitope_Rep6 978.5385970950199 978.53750993586 77.809 2 0.18967086417056714 0.0004893964110929853 0.001211451064446262 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 133602 17787 VYAALQRQLL True PC9_epitope_Rep5 1173.6869926642098 1173.6858899358601 73.435 2 0.18966670486288184 0.0004893964110929853 0.0012115671896670303 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 53214 17732 KQFDKILEL True PC9_epitope_Rep1 1132.6492101731599 1132.64810993586 73.004 2 0.18966224111652577 0.0004893964110929853 0.0012116918270374541 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 111970 4424 TIQSGEQPYK True NCI_RA007_Epitope_Rep2 1149.56660274801 1149.56550993586 21.841 2 0.18965432709393198 0.0004893964110929853 0.0012119128351211867 ['ENSG00000168653|ENST00000372969|NDUFS5'] 2888 17034 [Acetylation]-AEVQVLVLDGR True NCI_RA007_Epitope_Rep1 1239.68230152289 1239.6812099358601 70.387 2 0.1896497151154998 0.0004893964110929853 0.001212041648504706 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000479992.5_1_19:49990877-49993604:+|nuORF', 'ENST00000472481.5_1_19:49990877-49994169:+|nuORF'] 6752 17224 AQDEHLITF True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 71.405 2 0.1896494368065582 0.0004893964110929853 0.0012120494221624558 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 4562 10344 AKLRLEVNL True NCI_RA007_Epitope_Rep2 1054.6498788795 1054.6487899358601 44.825 2 0.18964843016466923 0.0004893964110929853 0.001212077539856569 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 94899 10971 RTDYGQVFTY True H1975_Epitope_Rep3 1248.5775017848798 1248.57640993586 47.288 2 0.18964795042450755 0.0004893964110929853 0.001212090940271259 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 82658 23003 PQPDVFPLF True PC9_epitope_Rep2 1058.54368247546 1058.5425899358602 93.974 2 0.189647830257314 0.0004893964110929853 0.00121209429688285 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 20836 11877 EQISDIDDAVR True PC9_epitope_Rep4 1259.59935942827 1259.5982699358601 53.46 2 0.18964683068351376 0.0004893964110929853 0.0012121222181840493 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 109794 8885 TEEATFPQA True H1975_Epitope_Rep2 992.4450906329997 992.44398993586 39.146 2 0.1896369228401281 0.0004893964110929853 0.001212399010895276 ['CERS6|p.A254Cfs*8|1|0.45|ENSG00000172292|chr2:168717891-168717892|-/T|frameshift_variant', 'ENSG00000172292|ENST00000305747|CERS6', 'nc|ENSG00000172292|Q6ZMG9-2|CERS6'] 78480 15471 NYNEKIYEL True PC9_epitope_Rep5 1184.5713537752797 1184.5702499358601 64.52 2 0.1896342951922333 0.0004893964110929853 0.001212472429407589 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 25797 11510 FEWENKVTV True NCI_RA007_Epitope_Rep3 1150.56587447202 1150.56476993586 52.39 2 0.18961969120547842 0.0004893964110929853 0.001212880557322628 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 19001 12038 ELERLTSLY True H1975_Epitope_Rep2 1122.5920892198599 1122.59098993586 51.385 2 0.18961179671637135 0.0004893964110929853 0.0012131012367160427 ['ENSG00000164031|ENST00000442697|DNAJB14', 'nc|ENSG00000164031|Q8TBM8-2|DNAJB14'] 8549 8863 ATVAVPLVGK True NCI_RA007_Epitope_Rep5 953.5909670210499 953.58986993586 40.757 2 0.1896060061916865 0.0004893964110929853 0.001213263128322065 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 6775 17499 AQDFRVLYV True PC9_epitope_Rep6 1109.58694426977 1109.58584993586 79.939 2 0.1895992473308314 0.0004893964110929853 0.0012134521200887255 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 40734 4607 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 23.09 3 0.18959910038165387 0.0004893964110929853 0.0012134562294203192 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 73203 18902 MRYVASYLL True PC9_epitope_Rep4 1114.5845017416198 1114.5834099358601 80.793 2 0.18959302861791483 0.0004893964110929853 0.001213626034271558 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 75144 13392 NHYNNIMAL True PC9_epitope_Rep6 1088.50731405008 1088.5062099358602 63.183 2 0.1895764834637756 0.0004893964110929853 0.0012140888621668207 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 98807 6898 SGM[Oxidation]NVAGVSLK True NCI_RA007_Epitope_Rep1 1077.54884488933 1077.54774993586 30.835 2 0.18957569451366876 0.0004893964110929853 0.0012141109363792318 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 46668 8858 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.54912993586 38.993 2 0.18955033071831534 0.0004893964110929853 0.0012148208101709695 ['ENSG00000170348|ENST00000303575|TMED10'] 67934 11930 LTDDDLLRY True H1975_Epitope_Rep3 1122.55570371114 1122.55460993586 51.044 2 0.18952643704930186 0.0004893964110929853 0.0012154899191955673 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 94767 8523 RSLDNFFAK True NCI_RA007_Epitope_Rep3 1096.5665431783598 1096.5654499358602 40.596 2 0.18952487524962733 0.0004893964110929853 0.001215533668090355 ['ENSG00000091527|ENST00000264993|CDV3', 'nc|ENSG00000091527|Q9UKY7-2|CDV3'] 89431 5298 QYEDIANR True NCI_RA007_Epitope_Rep1 1007.4672230599099 1007.46612993586 24.69 2 0.189511501056353 0.0004893964110929853 0.0012159083686089768 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 104167 15737 SQFNKEILL True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 68.457 2 0.18950322536460404 0.0004893964110929853 0.0012161402840309245 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 65759 7540 LSDDLHVERY True H1975_Epitope_Rep3 1245.59896550545 1245.59731490379 33.985 3 0.18949523681298566 0.0004893964110929853 0.0012163641947955548 ['ENSG00000162910|ENST00000336520|MRPL55', 'nc|ENSG00000162910|Q7Z7F7-2|MRPL55'] 53692 4054 KSFDEQNVPK True NCI_RA007_Epitope_Rep4 1190.59315184902 1190.5920499358601 21.858 2 0.18949309526453634 0.0004893964110929853 0.0012164242271888032 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 44310 14503 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep2 1067.5208988059899 1067.5198099358602 60.943 2 0.18949229985583046 0.0004893964110929853 0.0012164465250305617 ['ENSG00000138160|ENST00000260731|KIF11'] 64771 11631 LQAEVKQVL True PC9_epitope_Rep2 1026.6073453611798 1026.6062499358602 50.066 2 0.1894870958805083 0.0004893964110929853 0.0012165924191606247 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 49099 8342 KEIEYVETV True H1975_Epitope_Rep2 1108.5652057656798 1108.5641099358602 37.039 2 0.18948601168525206 0.0004893964110929853 0.0012166228169249024 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 104654 9638 SQTFVNPHV True PC9_epitope_Rep4 1027.5086939490698 1027.50758993586 44.697 2 0.18948336437109276 0.0004893964110929853 0.0012166970433159163 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 126026 10657 VLDVETGNEY True H1975_Epitope_Rep2 1137.51898384925 1137.51788993586 46.016 2 0.18948088151377684 0.0004893964110929853 0.001216766662730158 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 14363 5797 DSYVGDEAQTK True NCI_RA007_Epitope_Rep1 1211.5306111621096 1211.52950993586 26.602 2 0.18948006879042878 0.0004893964110929853 0.0012167894523916313 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 105616 9446 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4608749679298 41.337 1 0.18947712642682932 0.0004893964110929853 0.0012168719631003757 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 14733 9159 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 40.221 2 0.1894745602280545 0.0004893964110929853 0.0012169439298536358 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 6713 8911 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 39.228 2 0.1894688361698729 0.0004893964110929853 0.0012171044713297791 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 96241 9598 RYQDIIHSI True NCI_RA007_Epitope_Rep5 1143.6036569630699 1143.60254993586 43.561 2 0.18946465844791469 0.0004893964110929853 0.0012172216564381622 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 53682 8245 KSDVHLNFY True H1975_Epitope_Rep2 1121.55055876105 1121.54946993586 36.667 2 0.18946287147396923 0.0004893964110929853 0.0012172717845146963 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 62158 7691 LLEKEREDLY True H1975_Epitope_Rep3 1306.6768814729799 1306.6757899358602 34.565 2 0.18945826714066677 0.0004893964110929853 0.0012174009545095044 ['ENSG00000102189|ENST00000322349|EEA1', 'EEA1|p.S653*|1|0.32|ENSG00000102189|chr12:92813065-92813065|G/-|frameshift_variant'] 17760 20510 EHSIATLLL True PC9_epitope_Rep3 995.56514619603 995.56404993586 84.152 2 0.1894525334345512 0.0004893964110929853 0.0012175618271488215 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 93592 6082 RQNVAVNEL True NCI_RA007_Epitope_Rep3 1041.55670677065 1041.55560993586 30.906 2 0.18944523457751575 0.0004893964110929853 0.0012177666446221993 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 134470 20497 VYPQYVIEY True PC9_epitope_Rep2 1172.57537652656 1172.57426993586 84.272 2 0.1894448485409498 0.0004893964110929853 0.0012177774783806515 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 108317 10154 SYISRTNQL True PC9_epitope_Rep3 1080.5563724174801 1080.55526993586 44.011 2 0.1894441404877338 0.0004893964110929853 0.001217797349489119 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 96248 15426 RYQDIIHSI True PC9_epitope_Rep3 1143.6036569630699 1143.6020249037902 64.491 3 0.1894415369708719 0.0004893964110929853 0.0012178704184959634 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 116277 12042 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.49807496793 51.481 1 0.18944089978129894 0.0004893964110929853 0.0012178883022105338 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 1665 7472 AEFVEVTK True PC9_epitope_Rep6 921.4807478657299 921.47964993586 37.984 2 0.1894407354636989 0.0004893964110929853 0.0012178929140817763 ['CON__P02769'] 121074 10367 VEQWPYRAVA True H1975_Epitope_Rep2 1217.61930702721 1217.61820993586 44.887 2 0.1894391099886166 0.0004893964110929853 0.0012179385369292318 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3', 'CCT3|p.Q442H|1|0.1|ENSG00000163468|chr1:156311025-156311025|C/A|missense_variant'] 138771 18164 YITERIIAV True PC9_epitope_Rep3 1076.62299542532 1076.62188993586 75.07 2 0.18943812624996773 0.0004893964110929853 0.0012179661487405216 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 37915 10135 GYSFTTTAER True PC9_epitope_Rep3 1131.51965255559 1131.5185499358602 43.936 2 0.18943605259243518 0.0004893964110929853 0.0012180243547111969 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 76498 19812 NQIGAKFWEV True PC9_epitope_Rep1 1190.60840799034 1190.60730993586 81.022 2 0.1894319381335536 0.0004893964110929853 0.0012181398526615525 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 56628 14897 LDIDSPPITAR True PC9_epitope_Rep2 1196.6401020414398 1196.63900993586 62.567 2 0.18942932756237815 0.0004893964110929853 0.0012182131403174644 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 116903 11298 TVFLSTWNK True NCI_RA007_Epitope_Rep4 1094.5760452329 1094.57494993586 50.354 2 0.18942455157241045 0.0004893964110929853 0.0012183472301226515 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF'] 53332 11729 KQMEQVAQFL True NCI_RA007_Epitope_Rep4 1220.6223438023196 1220.62124993586 52.086 2 0.1894150783097481 0.0004893964110929853 0.0012186132434696157 ['ENSG00000149591|ENST00000392951|TAGLN', 'ENST00000533863.1_2_11:117074025-117074655:+|nuORF'] 108501 19579 SYMGHFDLL True PC9_epitope_Rep4 1081.49026700361 1081.4891699358602 83.433 2 0.1894124106498964 0.0004893964110929853 0.0012186881630292408 ['ENSG00000169976|ENST00000367569|SF3B5'] 107184 14850 SVINEINKI True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 65.059 2 0.18940463290519252 0.0004893964110929853 0.0012189066224893791 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 28493 11144 FSDVNMQEY True H1975_Epitope_Rep1 1131.4542754177098 1131.4531699358602 47.834 2 0.18939723561326915 0.0004893964110929853 0.001219114432310707 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 90144 6171 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 28.748 2 0.18939619974145064 0.0004893964110929853 0.001219143535570827 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 115307 10501 TRHPENWTL True PC9_epitope_Rep5 1152.56760580752 1152.56596490379 45.378 3 0.1893895082079464 0.0004893964110929853 0.0012193315538404712 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 41480 12253 HYLPDLHHL True PC9_epitope_Rep2 1143.5825275956702 1143.5808749037901 52.442 3 0.18938888004396912 0.0004893964110929853 0.0012193492054433253 ['ENSG00000130702|ENST00000252999|LAMA5'] 54848 17102 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 72.552 2 0.1893799582982389 0.0004893964110929853 0.0012195999369312505 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 89111 4509 QVQAAQFAK True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 24.589 2 0.18937536146431952 0.0004893964110929853 0.0012197291438223227 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 76485 9414 NQIDHEVTV True PC9_epitope_Rep5 1053.50908787189 1053.50798993586 41.166 2 0.18937038143730997 0.0004893964110929853 0.0012198691369164703 ['ENSG00000112159|ENST00000369393|MDN1'] 42686 11678 IEIQKAFAV True H1975_Epitope_Rep2 1017.5858816406098 1017.58478993586 49.992 2 0.18936900239577673 0.0004893964110929853 0.0012199079058778286 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD'] 40035 10820 HPTEDLVVSA True PC9_epitope_Rep1 1066.5294889632999 1066.52838993586 46.506 2 0.18936557691406677 0.0004893964110929853 0.0012200042117079663 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 34686 14149 GQDGQLKGFAV True PC9_epitope_Rep5 1118.5720224816198 1118.57092993586 59.435 2 0.1893640845038839 0.0004893964110929853 0.001220046172512315 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 9602 10500 AYAIIKEEL True NCI_RA007_Epitope_Rep3 1048.580461907 1048.57936993586 48.363 2 0.18936341525676398 0.0004893964110929853 0.0012200649896237877 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 22313 13393 ETDLLDIRSEY True H1975_Epitope_Rep2 1352.64597526752 1352.6454749679299 56.651 1 0.18934115411118063 0.0004893964110929853 0.0012206910684437172 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 78262 18550 NYIDKVRFL True PC9_epitope_Rep1 1166.64479349906 1166.64313490379 76.142 3 0.18933813398558244 0.0004893964110929853 0.0012207760321301692 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 14116 15228 DSDAPLFY True H1975_Epitope_Rep2 926.4021631918599 926.4016149679301 63.732 1 0.18933598434142293 0.0004893964110929853 0.001220836510608697 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 91405 16686 RHIEIFTDL True PC9_epitope_Rep2 1142.6084079903399 1142.60730993586 69.428 2 0.18933598062972043 0.0004893964110929853 0.001220836615037006 ['ENSG00000079246|ENST00000392132|XRCC5'] 8365 15051 ATLKELTSL True PC9_epitope_Rep6 974.56481184286 974.56370993586 69.936 2 0.18933491930082724 0.0004893964110929853 0.0012208664757667703 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 22737 10515 ETTFLVDKY True H1975_Epitope_Rep1 1114.5546410819798 1114.55354993586 45.398 2 0.1893248627634813 0.0004893964110929853 0.001221149455077263 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 3669 8790 AGQAVDDFIEK True H1975_Epitope_Rep3 1191.57716743171 1191.57606993586 38.817 2 0.18931808864177113 0.0004893964110929853 0.00122134010808187 ['nc|ENSG00000142657|P52209-2|PGD', 'ENSG00000142657|ENST00000270776|PGD'] 129216 7889 VQTEVNREL True PC9_epitope_Rep5 1086.56693710118 1086.5658499358601 35.288 2 0.189315816240847 0.0004893964110929853 0.0012214040699302165 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 21548 10267 ERNLQSDVL True PC9_epitope_Rep2 1072.55128703704 1072.55018993586 44.825 2 0.18931444770757996 0.0004893964110929853 0.0012214425920054398 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 43718 11703 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 50.035 2 0.189312521503424 0.0004893964110929853 0.001221496813709534 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 3505 14690 [Acetylation]-AGLNSLEAVKR True PC9_epitope_Rep1 1198.66698581192 1198.6658899358602 61.326 2 0.18930581758963141 0.0004893964110929853 0.0012216855444174815 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 24353 12075 EYYEALPELK True NCI_RA007_Epitope_Rep2 1253.6179696145298 1253.6168699358602 51.561 2 0.18930461973264728 0.0004893964110929853 0.0012217192699459172 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000532107.2_1_14:51374946-51378571:-|nuORF'] 8150 5624 ATELTHEDY True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 26.632 2 0.1893043015918566 0.0004893964110929853 0.0012217282273209156 ['ENSG00000165916|ENST00000298852|PSMC3'] 128405 8375 VPRPPDTVST True PC9_epitope_Rep1 1067.56112344475 1067.56002993586 37.05 2 0.1892896279145355 0.0004893964110929853 0.0012221414418529873 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 107533 17492 SVPDPELIKTV True PC9_epitope_Rep3 1196.66525416012 1196.66414993586 72.46 2 0.18928832370093387 0.0004893964110929853 0.0012221781756238208 ['ENSG00000073756|ENST00000367468|PTGS2'] 38960 10148 HHIVSIEV True PC9_epitope_Rep2 932.50796567308 932.50686993586 44.371 2 0.1892881188926608 0.0004893964110929853 0.0012221839442427957 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 40517 5729 HRDYETATL True PC9_epitope_Rep2 1104.51998690876 1104.5188899358602 27.428 2 0.18928182084137907 0.0004893964110929853 0.001222361348149221 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 9606 16937 AYAIIKEEL True PC9_epitope_Rep3 1048.580461907 1048.57936993586 70.304 2 0.1892817370285304 0.0004893964110929853 0.0012223637091689063 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 138364 14306 YHGAEIVSL True PC9_epitope_Rep2 987.50254593947 987.50144993586 60.292 2 0.1892714572484199 0.0004893964110929853 0.0012226533266888441 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 88178 16583 QRVPLSVQL True PC9_epitope_Rep5 1038.61857875122 1038.61748993586 68.792 2 0.18927031609220257 0.0004893964110929853 0.001222685481310824 ['ENSG00000125826|ENST00000356286|RBCK1'] 102509 6638 SLVNLGGSK True NCI_RA007_Epitope_Rep3 873.4919812557699 873.49088993586 33.179 2 0.18925353134459547 0.0004893964110929853 0.0012231585269753774 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 111184 17996 THIDTVINAL True PC9_epitope_Rep2 1095.59242357303 1095.5913299358601 74.525 2 0.1892494202193523 0.0004893964110929853 0.001223274419066462 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF'] 115640 9875 TRVSQINTL True PC9_epitope_Rep5 1030.5771078620598 1030.5760099358602 42.954 2 0.18924781324155207 0.0004893964110929853 0.0012233197225563497 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 43712 11746 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 50.054 2 0.1892423569353444 0.0004893964110929853 0.0012234735578396925 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 120894 4995 VENIQRVAA True NCI_RA007_Epitope_Rep5 998.5508931142198 998.54978993586 25.917 2 0.18924069579856456 0.0004893964110929853 0.0012235203958379163 ['ENSG00000173801|ENST00000393931|JUP'] 54518 13913 KYIENLDNITF True NCI_RA007_Epitope_Rep4 1368.6925315371197 1368.69142993586 60.791 2 0.1892345339594455 0.0004893964110929853 0.0012236941529292116 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 28171 9418 FRDQNPEQL True PC9_epitope_Rep5 1145.5465360097699 1145.54542993586 41.181 2 0.1892341750871198 0.0004893964110929853 0.0012237042734967788 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 115545 6409 TRSITNTTV True PC9_epitope_Rep3 991.52982331647 991.52872993586 29.677 2 0.18923341387543255 0.0004893964110929853 0.0012237257407246799 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 105125 15340 SRFEFNQSL True PC9_epitope_Rep2 1126.54072235334 1126.5396299358601 64.285 2 0.18922983039576424 0.0004893964110929853 0.0012238268049062026 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.E805Ffs*3|1|0.08|ENSG00000048028|chr11:113805034-113805035|-/AGGTGAA|frameshift_variant', 'ENST00000545608.5_2_11:113688400-113704155:-|nuORF', 'ENST00000540438.5_1_11:113691037-113702685:-|nuORF'] 29370 10203 FVDKNNDLLY True H1975_Epitope_Rep3 1239.61355294043 1239.61244993586 44.291 2 0.18921867692216934 0.0004893964110929853 0.0012241414177178774 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 77074 19260 NRLEEPGNFVL True PC9_epitope_Rep5 1286.6619001151798 1286.66080993586 79.124 2 0.18920833107115548 0.0004893964110929853 0.0012244333219226734 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 23958 22240 EYLPIGGLAEF True PC9_epitope_Rep4 1207.6124903112698 1207.6113899358602 93.783 2 0.18920332898400405 0.0004893964110929853 0.0012245744789132886 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 27925 9427 FQEETGVRV True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 41.601 2 0.18918655443617446 0.0004893964110929853 0.001225047969362599 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'WNK1|p.L900Afs*27|1|0.06|ENSG00000060237|chr12:879896-879897|TC/-|frameshift_variant'] 62852 19253 LLMEHIQEI True PC9_epitope_Rep1 1124.58998104488 1124.5888899358602 78.856 2 0.18917377400845414 0.0004893964110929853 0.0012254088421028457 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 4417 18961 AIQDKLFQV True PC9_epitope_Rep5 1060.59169529704 1060.5905899358602 77.958 2 0.18917122965516558 0.0004893964110929853 0.0012254806980952183 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 33197 19917 GIYTGFIKV True PC9_epitope_Rep5 996.5644179200399 996.56332993586 81.665 2 0.18916421976287467 0.0004893964110929853 0.0012256786888268896 ['ENSG00000153179|ENST00000542104|RASSF3'] 75047 8310 NHSNQFTQL True PC9_epitope_Rep4 1087.50467119779 1087.50356993586 39.421 2 0.18915967470905803 0.0004893964110929853 0.0012258070786264961 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A'] 96206 10097 RYPTSIASL True NCI_RA007_Epitope_Rep4 1006.5447451046199 1006.54364993586 45.69 2 0.18914518594822538 0.0004893964110929853 0.0012262164507225366 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 49118 11748 KEIQGFLDCAA True H1975_Epitope_Rep2 1193.5750592567301 1193.57396993586 50.264 2 0.18914289257050357 0.0004893964110929853 0.0012262812614331224 ['ENSG00000172586|ENST00000372833|CHCHD1'] 10151 6051 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep5 1119.5171508382302 1119.51604993586 29.957 2 0.18914196481223877 0.0004893964110929853 0.0012263074807992002 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 53793 13319 KTDDLTMVLY True H1975_Epitope_Rep2 1197.59512599497 1197.5940299358601 56.362 2 0.1891402669383518 0.0004893964110929853 0.0012263554658499254 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 54754 17261 KYMVYPQTF True PC9_epitope_Rep5 1175.5685173243098 1175.56740993586 71.405 2 0.1891399860376519 0.0004893964110929853 0.0012263634048038012 ['ENSG00000112996|ENST00000507110|MRPS30'] 74243 7116 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4596499358599 32.342 2 0.1891375125673102 0.0004893964110929853 0.0012264333134649125 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 40816 7571 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.4134299358602 34.074 2 0.18913741641508922 0.0004893964110929853 0.0012264360311334747 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 66124 9150 LSELKPMSY True H1975_Epitope_Rep1 1066.53688284286 1066.53578993586 40.102 2 0.18913498755275565 0.0004893964110929853 0.0012265046830615923 ['TMTC3|p.K629Qfs*3|1|0.1|ENSG00000139324|chr12:88192781-88192782|-/C|frameshift_variant', 'ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 78285 19880 NYIKDLNIL True PC9_epitope_Rep2 1104.61791004488 1104.6168099358601 81.861 2 0.18913401575249011 0.0004893964110929853 0.001226532152128991 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 138483 14298 YHSDIVQSL True PC9_epitope_Rep1 1060.5189242796 1060.5178299358602 59.821 2 0.18913315905574452 0.0004893964110929853 0.001226556368172762 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 32008 4171 GEQGARIQSV True H1975_Epitope_Rep3 1043.53597132607 1043.5348699358601 21.161 2 0.18912414900026822 0.0004893964110929853 0.0012268110823082587 ['ENSG00000196878|ENST00000356082|LAMB3'] 8118 13815 ATEEAPYWTY True H1975_Epitope_Rep2 1229.5240692296898 1229.5229699358601 58.286 2 0.18910686843450558 0.0004893964110929853 0.001227299752053625 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 71277 20351 LYPSIIQEF True PC9_epitope_Rep6 1108.580461907 1108.57936993586 90.98 2 0.18910189679842893 0.0004893964110929853 0.0012274403789755534 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 106111 12079 STDHIPILY True H1975_Epitope_Rep2 1057.54441075145 1057.5433099358602 51.544 2 0.18909365701325476 0.0004893964110929853 0.0012276734838292762 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 89659 15597 QYVDFHNQL True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 64.814 2 0.18908671132712998 0.0004893964110929853 0.001227870012887303 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 133520 20724 VWMRSPLSTF True PC9_epitope_Rep1 1222.61686449906 1222.61576993586 84.54 2 0.18907726883110318 0.0004893964110929853 0.0012281372400841791 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 24448 8673 FADLSEAANR True PC9_epitope_Rep6 1092.5199869087598 1092.5188899358602 43.207 2 0.1890702488696293 0.0004893964110929853 0.0012283359461717493 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 111430 12451 THSNTIVVSL True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 59.319 2 0.18906798798289987 0.0004893964110929853 0.001228399949390251 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 59346 21105 LFKNDPLFF True PC9_epitope_Rep2 1139.6015317047497 1139.6004299358601 86.639 2 0.1890662639710526 0.0004893964110929853 0.0012284487565177899 ['ENSG00000103642|ENST00000261893|LACTB', 'nc|ENSG00000103642|P83111-2|LACTB'] 40598 12957 HRIEEVPEL True PC9_epitope_Rep1 1120.58767254576 1120.58656993586 54.711 2 0.1890657760242896 0.0004893964110929853 0.0012284625707433318 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 9553 7760 AWAPKPYHKF True PC9_epitope_Rep2 1243.6502132326698 1243.64857490379 35.223 3 0.18906346599480936 0.0004893964110929853 0.001228527971935056 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 137544 16514 YEELNVWQV True H1975_Epitope_Rep3 1178.5607890915799 1178.5596899358602 69.018 2 0.18906145760799037 0.0004893964110929853 0.0012285848359040537 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 137147 16815 YAVEGRDLTL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 69.686 2 0.18905525501311227 0.0004893964110929853 0.0012287604682172078 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 73368 15117 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.5468749679299 63.301 1 0.1890438112938533 0.0004893964110929853 0.0012290845739698945 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 70983 17646 LYHDIFSRL True PC9_epitope_Rep2 1162.61349337078 1162.6123899358602 73.155 2 0.18903930772327276 0.0004893964110929853 0.0012292121463126126 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 76443 14912 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 62.622 2 0.18903129854154072 0.0004893964110929853 0.001229439054667705 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 118308 20691 TYLSIIHSL True PC9_epitope_Rep5 1045.58079626017 1045.5796899358602 84.643 2 0.1890277779398556 0.0004893964110929853 0.0012295388102208174 ['ENSG00000133030|ENST00000651222|MPRIP'] 137565 8715 YEEMGIKPP True H1975_Epitope_Rep1 1062.5055827145798 1062.5044899358602 38.45 2 0.18900818683086565 0.0004893964110929853 0.001230094068667164 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 65317 8266 LRDEHNYTL True PC9_epitope_Rep1 1159.56218607391 1159.56055490379 36.628 3 0.1890023827731323 0.0004893964110929853 0.001230258617683725 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 21797 9347 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 40.81 2 0.18900126650671273 0.0004893964110929853 0.001230290267132406 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 89565 17473 QYM[Oxidation]ERLQLL True PC9_epitope_Rep5 1208.62234418276 1208.62124993586 72.212 2 0.18899536409676373 0.0004893964110929853 0.0012304576314514518 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 28451 11959 FSDIHDFEY True H1975_Epitope_Rep2 1171.48220441771 1171.48110993586 51.079 2 0.18898608856927418 0.0004893964110929853 0.0012307206874903158 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.P172Tfs*35|1|0.24|ENSG00000196455|chr3:130744687-130744705|CTTCTGGAAGATAAGTGGG/-|frameshift_variant'] 32223 11191 GEYGKFFVT True NCI_RA007_Epitope_Rep4 1046.50729696674 1046.5061899358602 49.933 2 0.18897057765297662 0.0004893964110929853 0.0012311607065399533 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 98889 5777 SGVSLAALKK True NCI_RA007_Epitope_Rep5 972.59678067748 972.59568993586 28.908 2 0.18897005053276028 0.0004893964110929853 0.0012311756628398316 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 28742 15476 FSSPHLVQV True PC9_epitope_Rep1 1012.5341804209198 1012.53308993586 64.349 2 0.18896873263083172 0.0004893964110929853 0.001231213057263334 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 62463 17713 LLIDDKGTIKL True PC9_epitope_Rep2 1227.74383883399 1227.74218490379 73.415 3 0.1889623288350424 0.0004893964110929853 0.0012313947761077003 ['ENSG00000170312|ENST00000395284|CDK1'] 35577 2608 GTADVHFER True NCI_RA007_Epitope_Rep3 1030.48320747722 1030.48210993586 14.729 2 0.18895968844523445 0.0004893964110929853 0.0012314697095903782 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 69903 17922 LVILEGELER True PC9_epitope_Rep2 1169.6655885132898 1169.66448993586 74.243 2 0.18895889863174412 0.0004893964110929853 0.001231492125152181 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 71830 10439 MELERIVSA True H1975_Epitope_Rep1 1046.5430308524599 1046.54192993586 45.109 2 0.18895557023561455 0.0004893964110929853 0.0012315865922888404 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'CUEDC2|p.L11Pfs*19|1|0.27|ENSG00000107874|chr10:102425157-102425158|-/G|frameshift_variant'] 27869 21024 FQDPVPLTV True PC9_epitope_Rep5 1014.5385970950199 1014.53750993586 85.926 2 0.18894374165539188 0.0004893964110929853 0.001231922371970637 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 116244 19838 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.5429699358601 82.291 2 0.1889409969904772 0.0004893964110929853 0.001232000298304161 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 109833 5641 TEEKFIVKA True H1975_Epitope_Rep3 1063.5913609438699 1063.59026993586 26.735 2 0.188939699346404 0.0004893964110929853 0.001232037142644182 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 23993 6203 EYMKHTRLF True NCI_RA007_Epitope_Rep3 1223.6121134717898 1223.61046490379 31.406 3 0.18893946585771418 0.0004893964110929853 0.0012320437722655344 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 140033 18914 YQELMSVKL True PC9_epitope_Rep5 1109.57908200801 1109.5779899358602 77.774 2 0.18892537756549443 0.0004893964110929853 0.0012324438580196947 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'KRT4|p.R420H|1|0.19|ENSG00000170477|chr12:52807731-52807731|C/T|missense_variant', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 142408 17368 YYEYNHDLF True PC9_epitope_Rep4 1262.5244035828598 1262.5233099358602 74.81 2 0.18891994504030246 0.0004893964110929853 0.0012325981681463756 ['ENSG00000151748|ENST00000324679|SAV1'] 36612 22129 GVIAEILRGV True PC9_epitope_Rep5 1025.6233297784897 1025.62222993586 90.154 2 0.18891117571185514 0.0004893964110929853 0.00123284730058112 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 107876 19747 SVVKVLTEL True PC9_epitope_Rep5 986.6011973515799 986.60010993586 81.002 2 0.188905306674093 0.0004893964110929853 0.001233014065342349 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 68129 13366 LTDPMFRGIY True H1975_Epitope_Rep1 1211.6008800817501 1211.5997899358601 56.523 2 0.18890483802943403 0.0004893964110929853 0.0012330273825402129 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000522280.1_1_8:125534346-125551287:-|nuORF'] 97395 9435 SEDSRFITV True H1975_Epitope_Rep3 1052.51383889916 1052.51274993586 41.293 2 0.1889022526188673 0.0004893964110929853 0.0012331008532141467 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'PTPRG|p.F707L|1|0.16|ENSG00000144724|chr3:62203914-62203914|T/C|missense_variant'] 88533 18413 QTAPEEAFIKL True PC9_epitope_Rep4 1245.6605031328497 1245.6594099358601 78.893 2 0.18889694649639488 0.0004893964110929853 0.0012332516532237697 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 97967 6295 SENWRVDSA True H1975_Epitope_Rep2 1062.47303671634 1062.47192993586 29.151 2 0.18889488775748392 0.0004893964110929853 0.0012333101675656257 ['ENST00000480874.5_1_2:264964-275202:+|nuORF', 'nc|ENSG00000143727|P24666-4|ACP1', 'ENSG00000143727|ENST00000272065|ACP1', 'ENST00000484464.5_1_2:265208-277301:+|nuORF', 'ENST00000405364.2_1_2:269313-272255:+|nuORF'] 78580 19561 NYRDTFFNL True PC9_epitope_Rep4 1188.55637241748 1188.55526993586 83.365 2 0.18888457789141502 0.0004893964110929853 0.0012336032407847621 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 85807 12730 QHDPYITSI True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 54.271 2 0.18886239141654923 0.0004893964110929853 0.0012342341610344593 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 24523 22541 FAFQAEIAQL True PC9_epitope_Rep1 1136.5866099165999 1136.58550993586 91.506 2 0.1888552271066685 0.0004893964110929853 0.0012344379627265585 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'HSP90AA1|p.T19S|1|0.38|ENSG00000080824|chr14:102086324-102086324|T/A|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 36626 16578 GVIDLIFEK True NCI_RA007_Epitope_Rep2 1032.58554728744 1032.5844499358602 69.213 2 0.1888527221752134 0.0004893964110929853 0.0012345092279717525 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 104775 14371 SQWSLQHEI True PC9_epitope_Rep4 1126.54072235334 1126.5396299358601 63.186 2 0.18884134782921294 0.0004893964110929853 0.0012348328797605974 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 72119 18081 M[Oxidation]FLSFPTTK True PC9_epitope_Rep3 1086.54196860374 1086.5408699358602 74.747 2 0.18883981078872844 0.0004893964110929853 0.001234876622065538 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 77856 14590 NVELDPEIQ True PC9_epitope_Rep6 1055.51350454599 1055.5124099358602 68.018 2 0.18881356823753342 0.0004893964110929853 0.0012356236929289314 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 137809 5314 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 25.491 2 0.18881267953341188 0.0004893964110929853 0.001235649000418244 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 28842 6836 FTAERSSYY True H1975_Epitope_Rep2 1122.49818883502 1122.49708993586 31.211 2 0.18881144565177127 0.0004893964110929853 0.0012356841383358386 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 120655 6866 VEILANDQGNR True PC9_epitope_Rep2 1227.6207635791898 1227.6196699358602 31.812 2 0.18880829600731697 0.0004893964110929853 0.0012357738370140342 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 55062 16080 KYTKIFNDF True PC9_epitope_Rep1 1174.60225998074 1174.60116993586 66.666 2 0.18879020129246832 0.0004893964110929853 0.0012362892826301205 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 82973 11677 PSEYDTPLY True H1975_Epitope_Rep2 1083.47605640811 1083.4749499358602 49.988 2 0.18878445025580903 0.0004893964110929853 0.0012364531516605058 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 88248 7158 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.4433499358602 32.467 2 0.18878414579086045 0.0004893964110929853 0.0012364618276383159 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 77682 11921 NTIESLKDV True PC9_epitope_Rep2 1017.5342399905699 1017.53314993586 51.177 2 0.18878309820964762 0.0004893964110929853 0.0012364916797883538 ['ENSG00000180104|ENST00000512944|EXOC3'] 89614 12815 QYQEAFQKL True PC9_epitope_Rep2 1153.5767735088898 1153.57566993586 54.594 2 0.18877845640910393 0.0004893964110929853 0.0012366239624533662 ['ENSG00000082516|ENST00000285873|GEMIN5'] 140292 11083 YRAQPSVSL True PC9_epitope_Rep5 1019.5399940773499 1019.53888993586 47.619 2 0.18877403699259881 0.0004893964110929853 0.001236749920772912 ['ENSG00000239306|ENST00000310137|RBM14'] 107182 15463 SVINEINKI True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 64.756 2 0.18877042082907008 0.0004893964110929853 0.001236852995051576 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 134161 12238 VYLPLTSHI True NCI_RA007_Epitope_Rep3 1041.58588164061 1041.58478993586 55.285 2 0.188767598495746 0.0004893964110929853 0.0012369334481641338 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 89539 20503 QYLQDAYSF True PC9_epitope_Rep3 1133.5029398622898 1133.50184993586 84.125 2 0.18876446095576785 0.0004893964110929853 0.001237022892680166 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 108548 16650 SYNEHWNYL True PC9_epitope_Rep2 1224.5199869087598 1224.5188899358602 69.288 2 0.18876254292528902 0.0004893964110929853 0.001237077574797228 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 36414 20107 GVFPDNFVKL True PC9_epitope_Rep4 1134.60734536118 1134.6062499358602 85.476 2 0.18876239032130623 0.0004893964110929853 0.0012370819255667113 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 97920 5368 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 25.688 2 0.18876167075631273 0.0004893964110929853 0.0012371024407125356 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 12707 5668 DLEAHIDSANK True NCI_RA007_Epitope_Rep2 1211.57823006087 1211.57659490379 26.661 3 0.18875694721471517 0.0004893964110929853 0.001237237119635998 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 90272 9912 REEFPTLQAA True H1975_Epitope_Rep2 1160.5825871653199 1160.5814899358602 43.115 2 0.18875202080283776 0.0004893964110929853 0.0012373775985135523 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 24529 13649 FAFQAEVNR True PC9_epitope_Rep5 1080.53524305008 1080.5341499358601 57.525 2 0.1887363325120915 0.0004893964110929853 0.0012378250638256528 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000559111.1_1_15:99797871-99798159:+|nuORF'] 41055 4896 HTLNQIDSVK True NCI_RA007_Epitope_Rep1 1153.6091362663299 1153.60750490379 23.125 3 0.18873035382306128 0.0004893964110929853 0.0012379956321645707 ['CON__P12763'] 76438 15595 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 64.806 2 0.18872857791059808 0.0004893964110929853 0.0012380463023995098 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 65909 4924 LSDPSGPKSY True H1975_Epitope_Rep3 1049.50293986229 1049.50184993586 24.066 2 0.18871639646811733 0.0004893964110929853 0.001238393918683859 ['nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 116523 13384 TTSHLMGMFY True H1975_Epitope_Rep2 1186.51510185246 1186.51400993586 56.616 2 0.18871029654572996 0.0004893964110929853 0.0012385680261631203 ['ENSG00000168496|ENST00000305885|FEN1'] 118259 16856 TYLEKFQNL True PC9_epitope_Rep4 1154.5971746002997 1154.5960699358602 72.817 2 0.18870641257241863 0.0004893964110929853 0.0012386788975420001 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 49626 4619 KGGEIQPVSVK True NCI_RA007_Epitope_Rep2 1140.65027280232 1140.64916993586 22.592 2 0.1886987989543029 0.0004893964110929853 0.001238896263730518 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF'] 4369 18095 AILSQFEKV True PC9_epitope_Rep3 1033.5807962601698 1033.5796899358602 74.799 2 0.18869831854912697 0.0004893964110929853 0.0012389099804162662 ['ENSG00000162441|ENST00000377223|LZIC', 'nc|ENSG00000162441|Q8WZA0-2|LZIC'] 24868 15622 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 68.014 2 0.18868152921212292 0.0004893964110929853 0.001239389450715574 ['ENSG00000204592|ENST00000376630|HLA-E'] 45423 20941 IQHDLIFSL True PC9_epitope_Rep5 1084.5916952970401 1084.5905899358602 85.607 2 0.18867807636753978 0.0004893964110929853 0.0012394880801982464 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 105595 11135 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45826993586 47.798 2 0.1886664160879114 0.0004893964110929853 0.0012398212107930314 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 54320 19534 KYDEIFYNL True PC9_epitope_Rep4 1203.5811901829898 1203.58008993586 83.259 2 0.18866417608347794 0.0004893964110929853 0.0012398852173070725 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 111080 6821 THDQAVQAL True PC9_epitope_Rep1 981.4879585044899 981.48686993586 31.043 2 0.1886575161256326 0.0004893964110929853 0.0012400755403763138 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 63398 19686 LLVKELQSL True PC9_epitope_Rep1 1041.64339651673 1041.6422899358602 80.546 2 0.18865750773224482 0.0004893964110929853 0.001240075780254469 ['nc|ENSG00000141524|Q7Z403-2|TMC6', 'ENSG00000141524|ENST00000590602|TMC6', 'ENST00000586271.1_1_17:76120592-76121921:-|nuORF', 'ENST00000589553.5_1_17:76120816-76124832:-|nuORF', 'ENST00000588087.5_1_17:76116732-76122925:-|nuORF'] 99619 5286 SIFKQPVTK True NCI_RA007_Epitope_Rep1 1046.61243074162 1046.61132993586 24.644 2 0.18865558118542086 0.0004893964110929853 0.0012401308410760414 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 135320 16705 WGEEWGMGGY True H1975_Epitope_Rep2 1170.4440450871798 1170.44294993586 69.492 2 0.18865127570027815 0.0004893964110929853 0.0012402539009546921 ['ENSG00000135047|ENST00000343150|CTSL', 'nc|ENSG00000135047|P07711-3|CTSL'] 49340 9630 KESDIVLYA True H1975_Epitope_Rep3 1036.5440763982797 1036.5429699358601 42.058 2 0.1886475278197148 0.0004893964110929853 0.0012403610332814789 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 118953 12501 VADTVARVL True PC9_epitope_Rep3 942.5498304850598 942.54872993586 53.111 2 0.1886453891977936 0.0004893964110929853 0.0012404221694678201 ['ENSG00000145632|ENST00000274289|PLK2'] 37410 14691 GVTDLYYILK True NCI_RA007_Epitope_Rep3 1183.64887581999 1183.6477699358602 65.177 2 0.18864221937706308 0.0004893964110929853 0.0012405127898034 ['ENST00000508918.5_1_4:16504706-16675844:-|nuORF', 'nc|ENSG00000169744|O43679-2|LDB2', 'nc|ENSG00000169744|O43679-3|LDB2', 'ENSG00000169744|ENST00000304523|LDB2'] 7746 9285 ASQELWLNH True NCI_RA007_Epitope_Rep3 1096.53015766964 1096.5290699358602 43.628 2 0.18863812600237584 0.0004893964110929853 0.0012406298229567896 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 14847 17388 DVVLTQTPLSL True NCI_RA007_Epitope_Rep5 1184.6652541601197 1184.66414993586 73.664 2 0.18863769313649287 0.0004893964110929853 0.0012406421996171973 ['CON__Q05B55'] 108549 17767 SYNEHWNYL True PC9_epitope_Rep3 1224.5199869087598 1224.5188899358602 73.538 2 0.1886251353357578 0.0004893964110929853 0.0012410013107641833 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 140921 14173 YSEIKDFLSY True H1975_Epitope_Rep3 1263.60231955039 1263.6012299358601 59.851 2 0.18862113641526926 0.0004893964110929853 0.001241115688406054 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C', 'ENST00000492201.5_1_10:14962436-14970058:-|nuORF'] 14747 13809 DVNAAIATIK True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 58.194 2 0.1886199986714333 0.0004893964110929853 0.0012411482322338642 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 92362 20783 RLPEIYIQL True PC9_epitope_Rep2 1143.66519459047 1143.6640899358601 85.385 2 0.18861510519392494 0.0004893964110929853 0.0012412882141712837 ['EHD4|p.F425Sfs*51|1|0.18|ENSG00000103966|chr15:41900999-41900999|G/-|frameshift_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 17974 4737 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 23.312 3 0.18861168862208677 0.0004893964110929853 0.0012413859573942587 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 4418 16603 AIQDKLFQV True PC9_epitope_Rep6 1060.59169529704 1060.5905899358602 76.321 2 0.18860271213406524 0.0004893964110929853 0.0012416427986213635 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 78279 19486 NYIGLINRI True PC9_epitope_Rep2 1074.61857875122 1074.61748993586 80.335 2 0.18859809894494134 0.0004893964110929853 0.0012417748149724087 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 96145 5472 RYPDNLKHL True PC9_epitope_Rep4 1154.61964138038 1154.61799490379 27.797 3 0.1885964355544291 0.0004893964110929853 0.0012418224199294164 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 54718 21283 KYMDINFDF True PC9_epitope_Rep1 1191.52704643515 1191.5259499358601 86.69 2 0.1885926724856586 0.0004893964110929853 0.0012419301228150813 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 68354 12536 LTEMQVESSYY True H1975_Epitope_Rep2 1348.58568351008 1348.58458993586 53.314 2 0.18858944458441504 0.0004893964110929853 0.0012420225161195657 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'VPS13B|p.I2411Rfs*23|1|0.19|ENSG00000132549|chr8:99766880-99766893|TCAATCTCGTGAAT/-|frameshift_variant', 'nc|ENSG00000132549|Q7Z7G8-3|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-4|VPS13B'] 42678 8670 IEIGKVPPP True H1975_Epitope_Rep2 948.5644179200399 948.56332993586 38.309 2 0.18858521354456453 0.0004893964110929853 0.0012421436330349092 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B', 'PPP1R13B|p.S562Qfs*13|1|0.16|ENSG00000088808|chr14:103741932-103741932|T/-|frameshift_variant'] 43362 8484 IGAEVYHNLK True PC9_epitope_Rep1 1142.60840799034 1142.6067749037902 37.469 3 0.18858296272306665 0.0004893964110929853 0.0012422080694339545 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 65107 21410 LQMEPAAFQAL True PC9_epitope_Rep2 1217.61144476545 1217.61034993586 87.825 2 0.18857826370554953 0.0004893964110929853 0.0012423426034610325 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 45694 8424 IRLENEIQT True H1975_Epitope_Rep2 1114.59823722946 1114.5971499358602 37.354 2 0.1885754387757343 0.0004893964110929853 0.0012424234889269476 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 129308 21390 VQWENSFVSV True PC9_epitope_Rep3 1193.57168812845 1193.5705899358602 87.575 2 0.1885700127873417 0.0004893964110929853 0.0012425788646233137 ['ENSG00000174231|ENST00000304992|PRPF8'] 47890 11894 IYIINVHSM True NCI_RA007_Epitope_Rep3 1088.56885167748 1088.56774993586 53.918 2 0.18856384208341262 0.0004893964110929853 0.0012427555892702998 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'ENST00000520571.1_1_8:142199090-142200632:+|nuORF', 'nc|ENSG00000105339|A2RUS2-3|DENND3'] 41976 6876 IDEPLEGSEDR True NCI_RA007_Epitope_Rep2 1258.56772494682 1258.5666299358602 31.362 2 0.18854491198370962 0.0004893964110929853 0.0012432978913368008 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 104915 16105 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.4909699358602 69.885 2 0.18854367546379855 0.0004893964110929853 0.0012433333229277246 ['ENSG00000113387|ENST00000265073|SUB1'] 26316 18927 FHNELLTQL True PC9_epitope_Rep2 1113.5818588893299 1113.5807699358602 78.167 2 0.18853827088722888 0.0004893964110929853 0.0012434881990743833 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 118702 19700 TYTDVTPRQFF True PC9_epitope_Rep3 1373.6615657620098 1373.6604699358602 81.006 2 0.18853783260388984 0.0004893964110929853 0.0012435007595804654 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 3874 14334 AGYTDNLVRV True PC9_epitope_Rep2 1106.57202248162 1106.57092993586 60.4 2 0.18853763198069762 0.0004893964110929853 0.0012435065091657277 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 106791 20215 SVADYFKQI True PC9_epitope_Rep5 1069.54441075145 1069.54387496793 82.803 1 0.18853020146343907 0.0004893964110929853 0.0012437194763645829 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 124737 17549 VHAPPMQLGF True PC9_epitope_Rep4 1095.5535359665098 1095.5524299358601 75.517 2 0.1885236021987718 0.0004893964110929853 0.0012439086495649406 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 121645 12920 VFIDKQTNL True PC9_epitope_Rep5 1076.5866099166 1076.58550993586 54.707 2 0.1885218658796295 0.0004893964110929853 0.0012439584273354137 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 49087 7708 KEIEGIFHA True H1975_Epitope_Rep1 1042.54474510462 1042.54364993586 34.611 2 0.18852052421472898 0.0004893964110929853 0.0012439968923046516 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 29314 14455 FVDDYTVRV True PC9_epitope_Rep6 1112.55022440788 1112.54912993586 67.489 2 0.1885182727512388 0.0004893964110929853 0.0012440614434969426 ['ENSG00000115233|ENST00000409682|PSMD14'] 131059 14261 VTDSGPTFNYL True H1975_Epitope_Rep3 1212.56626839484 1212.56516993586 60.197 2 0.1885145170818088 0.0004893964110929853 0.001244169128905245 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 107320 14093 SVLEPPLFLK True NCI_RA007_Epitope_Rep3 1141.6746966450098 1141.67358993586 62.73 2 0.1885078195021917 0.0004893964110929853 0.0012443611901917597 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 118040 16287 TYFDKNYNL True PC9_epitope_Rep1 1176.5451390274397 1176.5440499358601 67.466 2 0.18850759047370838 0.0004893964110929853 0.001244367758389198 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 13497 8897 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep1 1091.49172393603 1091.4906299358602 38.608 2 0.1885070395921997 0.0004893964110929853 0.00124438355699671 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 97929 5968 SENEYIM[Oxidation]KA True H1975_Epitope_Rep3 1099.4855759264299 1099.48446993586 27.967 2 0.18850451179863428 0.0004893964110929853 0.0012444560536012295 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 133544 17750 VWSDVTPLTF True NCI_RA007_Epitope_Rep3 1163.58627556343 1163.5851699358602 77.826 2 0.1885034327906477 0.0004893964110929853 0.001244487000620001 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 25746 12430 FESVSHLISY True H1975_Epitope_Rep2 1180.57643915572 1180.57534993586 52.898 2 0.18850293368821402 0.0004893964110929853 0.0012445013156335933 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 15026 15466 DYLEVAKHF True PC9_epitope_Rep4 1120.55530978832 1120.5542099358602 67.419 2 0.188483019242885 0.0004893964110929853 0.0012450726268087445 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.L126Pfs*6|1|0.29|ENSG00000128272|chr22:39521916-39521917|-/C|frameshift_variant'] 25760 10826 FETEFNTQP True H1975_Epitope_Rep3 1111.48220441771 1111.4816749679298 46.721 1 0.18848141892548037 0.0004893964110929853 0.0012451185485744122 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 71695 9680 MEDQNIIQA True H1975_Epitope_Rep2 1060.4859098991599 1060.48480993586 42.216 2 0.1884800524334621 0.0004893964110929853 0.0012451577619685581 ['nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000374359.1_1_10:46274511-46281094:+|nuORF', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C'] 6877 18998 AQIDHYLGL True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 78.103 2 0.1884790831461085 0.0004893964110929853 0.0012451855777715262 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 2327 18675 AEPLEIILHLP True H1975_Epitope_Rep3 1243.71762408615 1243.71652993586 78.306 2 0.18847444449318018 0.0004893964110929853 0.0012453187026032076 ['ENSG00000100138|ENST00000401959|SNU13'] 53681 8190 KSDVHLNFY True H1975_Epitope_Rep1 1121.55055876105 1121.54946993586 36.443 2 0.18847389249019253 0.0004893964110929853 0.0012453345455026056 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 130993 10065 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.53352993586 43.655 2 0.1884658928460455 0.0004893964110929853 0.0012455641639692531 ['ENSG00000197081|ENST00000356956|IGF2R'] 115330 14127 TRIGLETSL True PC9_epitope_Rep2 988.55530978832 988.55420993586 59.611 2 0.1884596266578869 0.0004893964110929853 0.0012457440556805385 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 65629 20024 LSAFPFLQEY True H1975_Epitope_Rep2 1213.60192562757 1213.60082993586 83.0 2 0.18845671990231078 0.0004893964110929853 0.0012458275125827227 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 140659 17453 YRTDMIQAL True PC9_epitope_Rep3 1109.55392988933 1109.55282993586 72.308 2 0.18844821179836502 0.0004893964110929853 0.001246071824024685 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 95251 7657 RVLTSVFTK True NCI_RA007_Epitope_Rep4 1049.62332977849 1049.62222993586 36.108 2 0.18844747273596532 0.0004893964110929853 0.0012460930485762886 ['ENSG00000178573|ENST00000326043|MAF'] 121071 10172 VEQWPYRAVA True H1975_Epitope_Rep1 1217.61930702721 1217.61820993586 44.066 2 0.18844389382009236 0.0004893964110929853 0.0012461958337729826 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3', 'CCT3|p.Q442H|1|0.1|ENSG00000163468|chr1:156311025-156311025|C/A|missense_variant'] 10134 12309 AYVHMVTHF True PC9_epitope_Rep2 1103.52223583823 1103.52112993586 52.66 2 0.18843439432311074 0.0004893964110929853 0.0012464686971886778 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 106789 19235 SVADYFKQI True PC9_epitope_Rep4 1069.54441075145 1069.54387496793 82.087 1 0.18842857745081845 0.0004893964110929853 0.0012466358105134047 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 46697 9801 ITDVDNGYY True H1975_Epitope_Rep2 1058.4556553167 1058.45507496793 42.686 1 0.18842679818680402 0.0004893964110929853 0.001246686931597911 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 21490 20611 ERLLGNFSL True PC9_epitope_Rep1 1047.57129420563 1047.57018993586 84.097 2 0.18842053363740427 0.0004893964110929853 0.0012468669387915537 ['ENSG00000151012|ENST00000280612|SLC7A11'] 1176 4574 AEAPSQKVTV True H1975_Epitope_Rep3 1028.55022440788 1028.54912993586 22.715 2 0.1884204381794494 0.0004893964110929853 0.0012468696819068331 ['ENSG00000073050|ENST00000262887|XRCC1', 'ENST00000595789.5_1_19:44056953-44079610:-|nuORF'] 8813 7067 AVDSQILPK True NCI_RA007_Epitope_Rep5 969.5494961318899 969.54838993586 33.865 2 0.18841792185706022 0.0004893964110929853 0.0012469419940644075 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF'] 54398 19328 KYFGGVLEY True PC9_epitope_Rep1 1074.53859709502 1074.53750993586 79.151 2 0.1884146757184613 0.0004893964110929853 0.001247035285335313 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 14749 11874 DVNAAIATIK True PC9_epitope_Rep6 1014.57095985246 1014.56986993586 56.892 2 0.18840824056263822 0.0004893964110929853 0.0012472202469439165 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 54974 9113 KYQEVTNNL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 39.998 2 0.18840482884318685 0.0004893964110929853 0.0012473183189916858 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 108071 17141 SYANVKQWL True PC9_epitope_Rep4 1107.57129420563 1107.57018993586 73.938 2 0.1884013411843162 0.0004893964110929853 0.0012474185819579494 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 88830 19678 QVAFDFTKV True PC9_epitope_Rep1 1053.54949613189 1053.54838993586 80.515 2 0.18839539947356326 0.0004893964110929853 0.001247589412440169 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 23861 23777 EYIQFVPLL True PC9_epitope_Rep1 1120.6168474157198 1120.61574993586 96.254 2 0.1883858185353296 0.0004893964110929853 0.0012478649239744967 ['ENSG00000179409|ENST00000319004|GEMIN4'] 24438 7250 FADLSEAANR True NCI_RA007_Epitope_Rep5 1092.5199869087598 1092.5188899358602 34.563 2 0.18837602229381412 0.0004893964110929853 0.001248146689887331 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 8041 6466 ATDPNILGR True NCI_RA007_Epitope_Rep3 955.50869394907 955.50758993586 32.465 2 0.18837334813366072 0.0004893964110929853 0.001248223616914675 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 95133 17227 RVFIGNLNTL True PC9_epitope_Rep6 1145.65569253593 1145.65458993586 78.857 2 0.1883670459259633 0.0004893964110929853 0.0012484049300582531 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 7015 14837 AQMDYYGTRL True PC9_epitope_Rep5 1216.55465816532 1216.5535699358602 62.072 2 0.18835545761531508 0.0004893964110929853 0.0012487383921499966 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000397102.5_1_3:10355120-10362775:-|nuORF', 'ENST00000397099.1_1_3:10357003-10360966:-|nuORF'] 11709 18920 DHAEFSYVL True PC9_epitope_Rep4 1079.49237517859 1079.4912699358601 80.862 2 0.18834713955499702 0.0004893964110929853 0.001248977805456574 ['ENSG00000188352|ENST00000338382|FOCAD'] 28281 18708 FRPEWQSVY True PC9_epitope_Rep1 1210.57710786206 1210.5760099358602 76.749 2 0.18834186716489495 0.0004893964110929853 0.00124912958105165 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'ENST00000512755.1_1_13:33101488-33110480:-|nuORF'] 21474 20119 ERLGQFMTL True PC9_epitope_Rep1 1093.55901526977 1093.5579099358602 82.218 2 0.18833891006128467 0.0004893964110929853 0.0012492147148951038 ['ENSG00000113739|ENST00000265087|STC2'] 105440 9353 SRTSIQSEL True PC9_epitope_Rep3 1019.52473793603 1019.52364993586 40.915 2 0.18833429200145235 0.0004893964110929853 0.0012493476786473395 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 41117 10815 HTVEDLVKV True PC9_epitope_Rep6 1038.5709598524597 1038.5698699358602 52.448 2 0.18832497345554144 0.0004893964110929853 0.0012496160225816408 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 107665 9124 SVQRSFTQV True PC9_epitope_Rep5 1050.54580773378 1050.54470993586 40.042 2 0.18832388334038644 0.0004893964110929853 0.0012496474181417083 ['ENSG00000198911|ENST00000361204|SREBF2', 'nc|ENSG00000198911|Q12772-2|SREBF2', 'SREBF2-MEI1|1|fusion'] 89523 13813 QYLGQIQHI True PC9_epitope_Rep2 1098.5821932425 1098.58108993586 58.415 2 0.18832315631403437 0.0004893964110929853 0.001249668357102691 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 9991 8969 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep3 1108.5011664209198 1108.5000699358602 42.375 2 0.18832047798719867 0.0004893964110929853 0.001249745498168312 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 90566 7451 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 33.663 2 0.1883158309810864 0.0004893964110929853 0.001249879352385739 ['ENSG00000026025|ENST00000544301|VIM'] 29267 7748 FVAEPDNKNVY True H1975_Epitope_Rep3 1294.61936659686 1294.61826993586 34.785 2 0.18830982988656783 0.0004893964110929853 0.0012500522315717054 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 65352 11260 LRDLEDSLAR True PC9_epitope_Rep3 1186.6305999868998 1186.6289549037901 48.319 3 0.18830785691617677 0.0004893964110929853 0.0012501090740256553 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 73082 17927 MRENQITISL True PC9_epitope_Rep3 1203.6281574587497 1203.6270699358602 74.161 2 0.18830700588660548 0.0004893964110929853 0.0012501335934952445 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 44034 18026 IIIPEIQKV True PC9_epitope_Rep4 1051.66413196131 1051.66302993586 77.402 2 0.18830405180004375 0.0004893964110929853 0.001250218709009826 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 37511 19606 GVVDPRAISVL True PC9_epitope_Rep2 1124.65535818276 1124.6542699358602 80.799 2 0.18830379154248691 0.0004893964110929853 0.0012502262080380524 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 142876 17509 YYTPITPHL True PC9_epitope_Rep2 1103.56514619603 1103.56404993586 72.606 2 0.18829679897563545 0.0004893964110929853 0.001250427707855893 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 107196 9477 SVINPGAIYR True NCI_RA007_Epitope_Rep4 1088.59784330664 1088.59674993586 43.309 2 0.1882918177308634 0.0004893964110929853 0.001250571268696052 ['ENSG00000115232|ENST00000397033|ITGA4', 'ENST00000484404.1_1_2:182322441-182339919:+|nuORF', 'nc|ENSG00000115232|P13612-2|ITGA4', 'ITGA4|p.K301Sfs*50|1|0.15|ENSG00000115232|chr2:181482417-181482417|A/-|frameshift_variant', 'ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 75106 12881 NHVTPPNVSL True PC9_epitope_Rep3 1076.56145779792 1076.56036993586 54.563 2 0.1882897473566887 0.0004893964110929853 0.0012506309423087054 ['ENSG00000171223|ENST00000302754|JUNB'] 38990 15816 HHLVIPSVL True PC9_epitope_Rep4 1013.6022004110899 1013.60110993586 68.761 2 0.1882891206444363 0.0004893964110929853 0.0012506490063620454 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 95429 20453 RWFQPAIPSW True PC9_epitope_Rep4 1286.6560268890996 1286.65492993586 86.817 2 0.18828466863978613 0.0004893964110929853 0.0012507773363380865 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 119134 10851 VAIEHLDKI True PC9_epitope_Rep2 1036.59169529704 1036.5905899358602 47.055 2 0.18827868580463206 0.0004893964110929853 0.0012509498136190147 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 78273 18913 NYIEKVVAI True PC9_epitope_Rep3 1047.59644632431 1047.5953499358602 77.97 2 0.18827740209726365 0.0004893964110929853 0.0012509868243236219 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 21909 7638 ESDPAYQQY True H1975_Epitope_Rep3 1099.44581890899 1099.44527496793 34.363 1 0.18827424662614947 0.0004893964110929853 0.0012510778047151575 ['ENSG00000155660|ENST00000652332|PDIA4'] 60309 12181 LGSFLYEYSR True H1975_Epitope_Rep1 1233.6029882567298 1233.60188993586 51.873 2 0.1882670085598754 0.0004893964110929853 0.0012512865219426717 ['CON__P02769'] 52539 12720 KLFDDKLQNC True PC9_epitope_Rep1 1222.60160835774 1222.59997490379 53.8 3 0.1882646949418921 0.0004893964110929853 0.0012513532449047004 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'ENST00000524620.1_1_1:52211285-52225200:+|nuORF', 'ENST00000484890.5_1_1:52211210-52222042:+|nuORF', 'ENST00000473207.6_1_1:52195646-52226369:+|nuORF'] 105714 6062 SSETEVALAR True NCI_RA007_Epitope_Rep1 1061.5353026197297 1061.5342099358602 27.619 2 0.18826445913522896 0.0004893964110929853 0.0012513600455876842 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 134671 20516 VYSRTFTWL True PC9_epitope_Rep1 1171.6025943339098 1171.6014899358602 83.725 2 0.18826236092951165 0.0004893964110929853 0.001251420559639773 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 30037 3628 FYGDEEKDK True NCI_RA007_Epitope_Rep2 1129.4927691014097 1129.49113490379 18.763 3 0.18825372684812114 0.0004893964110929853 0.0012516696048285483 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 109882 4746 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 23.346 2 0.18825318060485294 0.0004893964110929853 0.001251685362577484 ['ENSG00000077721|ENST00000371558|UBE2A'] 118168 16441 TYIQKIFRM True PC9_epitope_Rep4 1198.65325000778 1198.65160490379 71.208 3 0.1882494602995298 0.0004893964110929853 0.0012517926893500105 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 9800 9148 AYLDKSPQF True NCI_RA007_Epitope_Rep4 1067.52876068731 1067.52766993586 42.028 2 0.18824909155092956 0.0004893964110929853 0.0012518033278496443 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF', 'ENST00000513447.1_1_5:54569247-54572159:-|nuORF'] 88288 12574 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52317496793 53.413 1 0.18823348770324155 0.0004893964110929853 0.0012522535862755303 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 7485 9293 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41947496793 40.704 1 0.1882282177467753 0.0004893964110929853 0.0012524056907201706 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 134832 22230 VYVDDIYVI True PC9_epitope_Rep5 1097.56447748969 1097.5633899358602 90.513 2 0.1882266019804162 0.0004893964110929853 0.0012524523295867082 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 1500 14801 AEELRLLLP True H1975_Epitope_Rep3 1052.62299542532 1052.62188993586 62.31 2 0.18821697588625008 0.0004893964110929853 0.001252730221518284 ['ENST00000566833.1_1_15:43477651-43481519:+|nuORF', 'ENST00000564630.5_1_15:43477651-43478217:+|nuORF', 'nc|ENSG00000166946|O95273-2|CCNDBP1', 'ENSG00000166946|ENST00000300213|CCNDBP1'] 54728 14345 KYMDVQFDF True NCI_RA007_Epitope_Rep4 1191.52704643515 1191.5259499358601 62.485 2 0.18821411714164074 0.0004893964110929853 0.0012528127613979506 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 64784 20229 LQAPPLTSL True PC9_epitope_Rep2 938.5436824754601 938.54258993586 83.228 2 0.1882104191213119 0.0004893964110929853 0.001252919541582016 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 7811 11188 ASVFGTMPLK True NCI_RA007_Epitope_Rep5 1049.5579526406098 1049.55684993586 49.67 2 0.1882067878294966 0.0004893964110929853 0.001253024403861957 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 107975 13687 SVYVQLEKV True PC9_epitope_Rep4 1063.5913609438699 1063.59026993586 60.537 2 0.1882044200269983 0.0004893964110929853 0.0012530927845898893 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 91062 13380 RFLNDPGHLLW True NCI_RA007_Epitope_Rep3 1366.7146043943799 1366.71295490379 59.901 3 0.18820111448398477 0.0004893964110929853 0.0012531882529634305 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 77278 12544 NSDELQELY True H1975_Epitope_Rep3 1109.48768372097 1109.4871749679298 53.45 1 0.18820043916088167 0.0004893964110929853 0.0012532077580684011 ['nc|ENSG00000160209|O00764-2|PDXK', 'PDXK|p.E67A|1|0.21|ENSG00000160209|chr21:43741724-43741724|A/C|missense_variant', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 11732 5421 DHASIQM[Oxidation]NV True PC9_epitope_Rep4 1029.45494450449 1029.45384993586 27.584 2 0.188197737829169 0.0004893964110929853 0.0012532857826671314 ['ENSG00000171858|ENST00000343986|RPS21'] 52505 16840 KLADDVDLEQV True PC9_epitope_Rep3 1243.62959692739 1243.6284899358602 69.928 2 0.188195638988083 0.0004893964110929853 0.0012533464084372532 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF', 'ENST00000480327.1_1_9:35060776-35061606:-|nuORF'] 130948 4530 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57308490379 22.535 3 0.18819025378829196 0.0004893964110929853 0.00125350197529602 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 76615 19606 NQPGVLIQV True PC9_epitope_Rep5 966.5498304850599 966.54872993586 80.467 2 0.18818940216563418 0.0004893964110929853 0.0012535265786186816 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 40194 16412 HQFESSFEL True PC9_epitope_Rep4 1122.4981888350198 1122.49708993586 71.091 2 0.18818539455417135 0.0004893964110929853 0.0012536423647506745 ['ENSG00000197442|ENST00000359015|MAP3K5'] 14419 4141 DTDSEEEIR True PC9_epitope_Rep4 1092.45711186868 1092.45600993586 22.255 2 0.1881846498572285 0.0004893964110929853 0.0012536638813855894 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 3824 12455 AGVLAHLEEER True PC9_epitope_Rep5 1222.6305999868998 1222.6289549037901 52.908 3 0.18818319589113117 0.0004893964110929853 0.001253705892102394 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 35851 9646 GTLSSWNLK True NCI_RA007_Epitope_Rep5 1004.52909504048 1004.52798993586 43.741 2 0.18818245049966523 0.0004893964110929853 0.0012537274298985849 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 49475 19229 KFAEEFYSF True PC9_epitope_Rep4 1166.5284263341398 1166.52732993586 82.064 2 0.1881766130818442 0.0004893964110929853 0.0012538961126419656 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 109832 5535 TEEKFIVKA True H1975_Epitope_Rep3 1063.5913609438699 1063.59026993586 26.339 2 0.18815952279477724 0.0004893964110929853 0.0012543900982251248 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 88672 13656 QTETGTPYMLY True H1975_Epitope_Rep1 1302.5802042068199 1302.57910993586 57.661 2 0.18815822772797763 0.0004893964110929853 0.0012544275393881876 ['ENSG00000167325|ENST00000300738|RRM1'] 129210 7055 VQTEVNREL True PC9_epitope_Rep2 1086.56693710118 1086.5658499358601 32.535 2 0.188157258127314 0.0004893964110929853 0.0012544555718621904 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 107404 12573 SVLNLVIVK True NCI_RA007_Epitope_Rep3 983.6379172134699 983.63682993586 56.695 2 0.18815692357009964 0.0004893964110929853 0.0012544652445120458 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 88651 13103 QTENLGVVYY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 55.526 2 0.18814507429496355 0.0004893964110929853 0.0012548078765616572 ['ENSG00000164031|ENST00000442697|DNAJB14', 'nc|ENSG00000164031|Q8TBM8-2|DNAJB14', 'DNAJB14|p.M289I|1|0.31|ENSG00000164031|chr4:99903874-99903874|C/A|missense_variant'] 83300 10762 PTDGPPNSFY True H1975_Epitope_Rep3 1093.47163973401 1093.4705499358602 46.477 2 0.18814044716984807 0.0004893964110929853 0.0012549416993613055 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 134596 21299 VYSIVPQSW True PC9_epitope_Rep2 1077.54949613189 1077.54838993586 87.389 2 0.18813445785067948 0.0004893964110929853 0.0012551149399269534 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 98247 9985 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 43.342 2 0.18811991771427497 0.0004893964110929853 0.001255535611943779 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 54662 14999 KYLSGIAHF True PC9_epitope_Rep3 1034.5549158654999 1034.55380993586 62.821 2 0.18811684529137476 0.0004893964110929853 0.0012556245206937476 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 58577 11890 LEQNIQLPAA True H1975_Epitope_Rep2 1095.59242357303 1095.59187496793 50.816 1 0.18809711318366149 0.0004893964110929853 0.0012561956723127598 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 141741 19350 YTYEELLNRV True PC9_epitope_Rep4 1298.65066672514 1298.6495699358602 82.539 2 0.18809382881251016 0.0004893964110929853 0.0012562907646766258 ['ENSG00000125977|ENST00000374980|EIF2S2'] 17526 16551 EHGDQDYIW True PC9_epitope_Rep3 1161.47270236317 1161.4716099358602 68.803 2 0.1880929467583599 0.0004893964110929853 0.0012563163040105875 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 116339 7743 TTEVHPELY True H1975_Epitope_Rep1 1087.5185899264297 1087.51807496793 34.743 1 0.18808998680963443 0.0004893964110929853 0.0012564020113047573 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 90997 16535 RFEEAHFTF True PC9_epitope_Rep5 1182.5458077337796 1182.54470993586 68.604 2 0.1880895077643052 0.0004893964110929853 0.0012564158829336425 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 17582 21861 EHIGIGLLSL True PC9_epitope_Rep1 1050.60734536118 1050.6062499358602 88.9 2 0.18808612803778776 0.0004893964110929853 0.0012565137534256904 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 142173 7935 YVTIIDAPGHR True NCI_RA007_Epitope_Rep1 1240.6564208119198 1240.6553299358602 34.859 2 0.1880827643265304 0.0004893964110929853 0.001256611167735079 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 84187 10919 PYKVTQDEL True PC9_epitope_Rep5 1091.54989005471 1091.5487899358602 46.989 2 0.1880799195717857 0.0004893964110929853 0.0012566935587833147 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 137499 6298 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 29.292 2 0.18807928652820985 0.0004893964110929853 0.0012567118940087158 ['ENSG00000127184|ENST00000247655|COX7C'] 115108 7667 TRDETNYGI True PC9_epitope_Rep4 1067.4883524273098 1067.48724993586 36.872 2 0.1880780712638948 0.0004893964110929853 0.0012567470931984725 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 103164 12195 SPIENIQRVA True PC9_epitope_Rep2 1125.6142216467701 1125.6131299358601 52.221 2 0.18806856669237274 0.0004893964110929853 0.0012570224198488696 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 26404 16428 FHYEADGANVL True PC9_epitope_Rep5 1234.5618517207397 1234.56074993586 68.19 2 0.18806554257653796 0.0004893964110929853 0.001257110034551528 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 98221 4011 SETSGIARP True NCI_RA007_Epitope_Rep4 916.4614094034799 916.46030993586 21.685 2 0.18804755100049772 0.0004893964110929853 0.0012576314131805808 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 43438 12607 IGGIGTVPVGR True PC9_epitope_Rep1 1024.6029286870798 1024.60182993586 53.361 2 0.18804753590799173 0.0004893964110929853 0.0012576318506379329 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 86182 10086 QIFNGTFVK True NCI_RA007_Epitope_Rep5 1052.5654805492 1052.5643899358602 45.431 2 0.18804544486581504 0.0004893964110929853 0.0012576924611176542 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 31747 8837 GEHGLIIRV True NCI_RA007_Epitope_Rep2 992.57671393924 992.57560993586 39.023 2 0.1880432672927348 0.0004893964110929853 0.0012577555828755574 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 76379 15647 NQAKYIPEL True PC9_epitope_Rep3 1074.57095985246 1074.5698699358602 65.332 2 0.18803856697489701 0.0004893964110929853 0.001257891842780571 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 105696 11025 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep1 1170.4539414449798 1170.45284993586 47.368 2 0.18803802250471582 0.0004893964110929853 0.0012579076276600675 ['ENSG00000115758|ENST00000234111|ODC1'] 95899 22312 RYLDLFTSF True PC9_epitope_Rep1 1160.5866099165999 1160.58550993586 90.635 2 0.18803287556736997 0.0004893964110929853 0.001258056853698244 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 59017 14298 LEVNLQAMK True PC9_epitope_Rep2 1044.5637662970398 1044.5626699358602 60.262 2 0.18802874721209636 0.0004893964110929853 0.0012581765606383705 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 77585 10954 NTDPWAGYRY True H1975_Epitope_Rep3 1241.5465360097699 1241.54542993586 47.223 2 0.18802344506659105 0.0004893964110929853 0.001258330319878591 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 54820 16869 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 69.747 2 0.18801819864726504 0.0004893964110929853 0.0012584824816334907 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 22326 10817 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 46.637 2 0.18801780738817506 0.0004893964110929853 0.0012584938300491974 ['ENSG00000150787|ENST00000280362|PTS'] 104322 8713 SQIQEFKEA True PC9_epitope_Rep1 1078.5294889632999 1078.52838993586 38.352 2 0.1880167392883813 0.0004893964110929853 0.001258524810658092 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 108312 9871 SYISRTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 42.828 2 0.18801293978284084 0.0004893964110929853 0.001258635022845773 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 104925 11301 SRDDTTLNAL True PC9_epitope_Rep1 1104.54111627616 1104.54000993586 48.348 2 0.18800953229094045 0.0004893964110929853 0.0012587338721311062 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 26806 18868 FLAEDALNTV True PC9_epitope_Rep6 1091.54989005471 1091.5487899358602 85.224 2 0.18800520759621397 0.0004893964110929853 0.0012588593401249935 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 106496 17759 STLHLVLRL True PC9_epitope_Rep2 1050.65496425994 1050.65386993586 73.593 2 0.18800097852887132 0.0004893964110929853 0.0012589820459037728 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 107021 20573 SVFKDFYEL True PC9_epitope_Rep2 1146.55972646242 1146.5586299358602 84.566 2 0.18799173915342257 0.0004893964110929853 0.0012592501667666378 ['ENSG00000100994|ENST00000216962|PYGB'] 76453 14317 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 62.973 2 0.1879816115889564 0.0004893964110929853 0.0012595441280819184 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 54964 9198 KYQEVTNNL True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 40.231 2 0.18795679832063916 0.0004893964110929853 0.0012602646454528837 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 135092 11603 WEDGRSTLLP True H1975_Epitope_Rep2 1172.58258716532 1172.5814899358602 49.697 2 0.18794799243121296 0.0004893964110929853 0.0012605204465415477 ['nc|ENSG00000157613|Q96BA8-2|CREB3L1', 'ENSG00000157613|ENST00000621158|CREB3L1'] 134838 19822 VYVDLGGSHVF True PC9_epitope_Rep1 1191.5924235730301 1191.5913299358601 81.059 2 0.18794747655744232 0.0004893964110929853 0.0012605354337027344 ['ENSG00000165733|ENST00000374518|BMS1'] 130126 9168 VSDRVTVLY True H1975_Epitope_Rep1 1050.57095985246 1050.5698699358602 40.169 2 0.18794200089022056 0.0004893964110929853 0.0012606945237607305 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 32082 5844 GESPVDYDGGR True NCI_RA007_Epitope_Rep2 1150.4890807032998 1150.48798993586 27.349 2 0.18792868479365535 0.0004893964110929853 0.0012610814936894702 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 133787 17416 VYEYVVERF True PC9_epitope_Rep4 1202.5971746002995 1202.5960699358602 74.984 2 0.1879266092418022 0.0004893964110929853 0.0012611418206013286 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 105600 11402 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45826993586 48.908 2 0.18792391019275728 0.0004893964110929853 0.0012612202740861214 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 113692 17195 TLYERGFENI True PC9_epitope_Rep5 1240.6088019131598 1240.6077099358602 71.161 2 0.18792364934308994 0.0004893964110929853 0.0012612278564845436 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 117161 17540 TVLEEIGNRV True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 72.262 2 0.18791378584813415 0.0004893964110929853 0.0012615146028618733 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 135444 12363 WHSDDEPSL True PC9_epitope_Rep5 1084.44615326216 1084.4450499358602 52.55 2 0.1879062387006467 0.0004893964110929853 0.001261734053731691 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 14971 13313 DYFEQYGK True PC9_epitope_Rep5 1048.4501760134401 1048.44906993586 56.221 2 0.1879022545564091 0.0004893964110929853 0.0012618499174279923 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 118518 15095 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.5233099358602 65.994 2 0.1878919674382736 0.0004893964110929853 0.0012621491284997757 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 134476 20717 VYPQYVIEY True PC9_epitope_Rep5 1172.57537652656 1172.57426993586 84.745 2 0.18788923752364653 0.0004893964110929853 0.0012622285427261071 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 104215 17660 SQHEEFLEL True PC9_epitope_Rep2 1130.5244035828598 1130.5233099358602 73.21 2 0.18786735488564588 0.0004893964110929853 0.0012628652978028383 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 54249 11405 KWNPTAGVAF True NCI_RA007_Epitope_Rep3 1089.56072952193 1089.5596299358601 51.986 2 0.18786167794773267 0.0004893964110929853 0.0012630305415972185 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 96283 11368 RYQTQPVTL True PC9_epitope_Rep3 1104.5927579261997 1104.5916699358602 48.731 2 0.18785994324210545 0.0004893964110929853 0.0012630810395752186 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 108086 20726 SYANYFIRL True PC9_epitope_Rep5 1145.58694426977 1145.58584993586 84.78 2 0.18783387804489127 0.0004893964110929853 0.0012638400516894015 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 125191 22018 VIIDQLPDL True PC9_epitope_Rep5 1024.580461907 1024.57936993586 89.719 2 0.18783321549410564 0.0004893964110929853 0.0012638593509630349 ['ENSG00000070018|ENST00000261349|LRP6'] 112338 20603 TLADVLYHV True PC9_epitope_Rep3 1029.54949613189 1029.54838993586 84.518 2 0.1878029663987392 0.0004893964110929853 0.0012647407839257029 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ENST00000520079.1_1_8:37996261-37996586:+|nuORF'] 137803 11123 YEQLSSEALEA True H1975_Epitope_Rep2 1238.56666231766 1238.5655699358601 47.82 2 0.18780122279884243 0.0004893964110929853 0.0012647916097281045 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 35946 6613 GTTAVFINK True NCI_RA007_Epitope_Rep4 949.5232813840499 949.52218993586 32.065 2 0.18779989582269585 0.0004893964110929853 0.0012648302923525699 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.S538Lfs*13|1|0.1|ENSG00000116539|chr1:155481257-155481257|G/-|frameshift_variant'] 72168 6775 M[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep1 1137.49720323929 1137.4961099358602 30.361 2 0.18779784888863466 0.0004893964110929853 0.0012648899647651104 ['ENSG00000171858|ENST00000343986|RPS21'] 36627 15406 GVIDLIFEK True NCI_RA007_Epitope_Rep3 1032.58554728744 1032.5844499358602 68.154 2 0.1877962488657049 0.0004893964110929853 0.001264936610748013 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 142327 11373 YYEEQHPEL True PC9_epitope_Rep1 1206.5193182024198 1206.51822993586 48.627 2 0.18779517389671185 0.0004893964110929853 0.0012649679506332087 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 118117 17086 TYHPGVPVF True PC9_epitope_Rep3 1015.5127167003499 1015.51160993586 70.873 2 0.18778721943456164 0.0004893964110929853 0.001265199880986041 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 113495 15138 TLTEEGVIKV True PC9_epitope_Rep1 1087.6124903112698 1087.6113899358602 63.051 2 0.1877815445049149 0.0004893964110929853 0.0012653653724642453 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 137610 9099 YEFGESDLR True H1975_Epitope_Rep1 1114.4931034545798 1114.49200993586 39.903 2 0.18777008301564402 0.0004893964110929853 0.001265699676937147 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76560 19953 NQLDGIHLL True PC9_epitope_Rep1 1021.5556441414899 1021.55454993586 81.572 2 0.1877693805935494 0.0004893964110929853 0.001265720167803908 ['ENSG00000165819|ENST00000298717|METTL3'] 49904 22001 KIIDIFTTL True PC9_epitope_Rep5 1062.6324974798601 1062.6314099358601 89.652 2 0.18776928015563013 0.0004893964110929853 0.0012657230977788157 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 2837 7575 AEVDRQVIP True NCI_RA007_Epitope_Rep4 1025.5505587610498 1025.54946993586 35.787 2 0.18775165118770715 0.0004893964110929853 0.0012662374753703055 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 7536 15354 ASDYFDQLY True H1975_Epitope_Rep3 1120.47130538084 1120.4707749679299 64.469 1 0.18773549627811487 0.0004893964110929853 0.0012667090269379273 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 45421 20945 IQHDLIFSL True PC9_epitope_Rep3 1084.5916952970401 1084.5905899358602 85.843 2 0.18772259543605715 0.0004893964110929853 0.0012670857207653426 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 68064 16290 LTDLVDDNYF True H1975_Epitope_Rep3 1213.5502839775302 1213.54977496793 68.131 1 0.18771790321592172 0.0004893964110929853 0.0012672227575294865 ['ENSG00000174231|ENST00000304992|PRPF8'] 54388 16227 KYFEKQFEL True PC9_epitope_Rep1 1230.6284747285797 1230.62736993586 67.235 2 0.1877144749262366 0.0004893964110929853 0.0012673228904705508 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 47305 11349 IVDSLTEM[Oxidation]Y True H1975_Epitope_Rep2 1085.49507798097 1085.49398993586 48.702 2 0.18770504288747805 0.0004893964110929853 0.0012675984208965136 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 138503 14571 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51257496793 61.046 1 0.18769395381076825 0.0004893964110929853 0.0012679224338242592 ['ENSG00000115306|ENST00000356805|SPTBN1'] 134428 20534 VYPLMKEYF True PC9_epitope_Rep5 1188.5889184157197 1188.58782993586 84.026 2 0.18769104553623714 0.0004893964110929853 0.0012680074247540497 ['ENSG00000100109|ENST00000407690|TFIP11'] 61980 16091 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.50137496793 67.103 1 0.18768973010834836 0.0004893964110929853 0.0012680458684751316 ['ENSG00000105397|ENST00000525621|TYK2'] 29025 6882 FTEPNRHFY True H1975_Epitope_Rep2 1209.5567067706497 1209.5550749037902 31.392 3 0.1876894350875739 0.0004893964110929853 0.001268054490694172 ['ENSG00000165355|ENST00000298097|FBXO33'] 71312 17547 LYQEVFGRL True PC9_epitope_Rep6 1123.6025943339098 1123.6014899358602 80.135 2 0.18768319789394525 0.0004893964110929853 0.0012682367914438886 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 133875 13616 VYGSFASKL True PC9_epitope_Rep2 970.5123823471799 970.51128993586 57.665 2 0.18768235537171513 0.0004893964110929853 0.001268261418705194 ['ENSG00000155096|ENST00000337198|AZIN1'] 23986 17934 EYMEHVYLI True PC9_epitope_Rep6 1195.5583465634297 1195.55724993586 81.61 2 0.18767951626355653 0.0004893964110929853 0.0012683444105005823 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 108687 13023 SYQRAFNEF True PC9_epitope_Rep4 1160.5250722892 1160.5239699358601 57.987 2 0.18766905123470673 0.0004893964110929853 0.001268650367508975 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 141673 20212 YTTDFIYQL True PC9_epitope_Rep6 1162.55464108198 1162.55354993586 90.421 2 0.1876578234126786 0.0004893964110929853 0.0012689787079208047 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 76764 7314 NQWDGTQHGV True PC9_epitope_Rep4 1140.49483479008 1140.49372993586 35.462 2 0.18765478487001166 0.0004893964110929853 0.0012690675800810952 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 27788 23037 FQAEIAQLMSL True PC9_epitope_Rep2 1249.63765951329 1249.63656993586 94.105 2 0.18764848533227707 0.0004893964110929853 0.0012692518506315896 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 104096 21111 SQDYPTLAF True PC9_epitope_Rep3 1040.48147614172 1040.4803699358602 86.485 2 0.18764238085868165 0.0004893964110929853 0.0012694304408660487 ['ENSG00000134697|ENST00000373062|GNL2'] 78473 10543 NYNDRYDEI True PC9_epitope_Rep2 1200.5047307674402 1200.50362993586 45.874 2 0.18764054124532345 0.0004893964110929853 0.0012694842648575248 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000429766.1_1_7:96830042-96830234:-|nuORF', 'ENST00000482859.1_1_4:113709241-113709472:-|nuORF', 'ENST00000541658.2_1_14:35704472-35704841:-|nuORF'] 107023 20943 SVFKDFYEL True PC9_epitope_Rep5 1146.55972646242 1146.5586299358602 85.615 2 0.1876383874175318 0.0004893964110929853 0.00126954728514209 ['ENSG00000100994|ENST00000216962|PYGB'] 49843 10851 KIAPNTPQL True PC9_epitope_Rep1 980.5654805492 980.56438993586 46.624 2 0.18763576000460866 0.0004893964110929853 0.0012696241666167018 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 99239 5840 SHMEGVASV True PC9_epitope_Rep6 915.4120166829099 915.41090993586 30.681 2 0.18763535897687958 0.0004893964110929853 0.0012696359016133778 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 108455 21991 SYLSSILRF True PC9_epitope_Rep1 1084.59169529704 1084.5905899358602 89.409 2 0.18763251970309044 0.0004893964110929853 0.0012697189884260704 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 96047 11917 RYLQTLTTI True NCI_RA007_Epitope_Rep2 1107.62880908175 1107.6277099358601 50.959 2 0.18763131905491434 0.0004893964110929853 0.001269754125117238 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 115169 17882 TRDPLVLEL True PC9_epitope_Rep6 1054.60225998074 1054.60116993586 81.409 2 0.18761809555438283 0.0004893964110929853 0.0012701411722966863 ['FKBP11|p.I85L|1|0.28|ENSG00000134285|chr12:48924591-48924591|T/A|missense_variant'] 50009 11660 KIYEGQVEV True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 49.846 2 0.1876155010014858 0.0004893964110929853 0.0012702171278206166 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 105621 11136 SSDPEEESVLY True H1975_Epitope_Rep3 1253.52994245577 1253.52884993586 47.93 2 0.18761446217451694 0.0004893964110929853 0.0012702475407518812 ['ENSG00000025772|ENST00000372813|TOMM34'] 48210 19973 IYPVDLGDKF True PC9_epitope_Rep5 1165.6019256275697 1165.60082993586 81.878 2 0.18760476031723639 0.0004893964110929853 0.0012705316097488782 ['nc|ENSG00000163882|P52434-3|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H', 'nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H'] 134301 16535 VYNPVRAEW True PC9_epitope_Rep1 1132.5665431783598 1132.5654499358602 68.424 2 0.18759651243872072 0.0004893964110929853 0.0012707731565404386 ['ENSG00000165572|ENST00000379485|KBTBD6'] 76064 7678 NMEADPGQY True H1975_Epitope_Rep2 1023.3967605415899 1023.39617496793 34.486 1 0.18759356792310364 0.0004893964110929853 0.0012708594005693098 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 107960 8579 SVYDSVLQK True NCI_RA007_Epitope_Rep5 1037.5393253710097 1037.53822993586 39.679 2 0.18759245356306167 0.0004893964110929853 0.0012708920413900457 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 72689 6013 MMDPNSTQRY True H1975_Epitope_Rep3 1241.51689275761 1241.51578993586 28.142 2 0.18758370561480925 0.0004893964110929853 0.001271148307530928 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 8347 8853 ATLAAVLQR True NCI_RA007_Epitope_Rep3 941.56581490237 941.56470993586 41.915 2 0.187575606305082 0.0004893964110929853 0.0012713856183622677 ['ENSG00000159399|ENST00000290573|HK2'] 138268 8811 YHADIYDKV True PC9_epitope_Rep2 1122.53457434374 1122.5329349037902 39.245 3 0.18756838851286342 0.0004893964110929853 0.0012715971380427105 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 76468 8942 NQGESITHAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 39.753 2 0.1875670367759829 0.0004893964110929853 0.0012716367550409098 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 140015 6483 YQDTPKQI True PC9_epitope_Rep1 991.4974605590298 991.49636993586 29.742 2 0.18756487708244912 0.0004893964110929853 0.0012717000543761257 ['ENSG00000048162|ENST00000614830|NOP16'] 74773 18849 NHDFTPLEI True PC9_epitope_Rep2 1084.5189242796 1084.5178299358602 77.871 2 0.18753577522598863 0.0004893964110929853 0.0012725533206426178 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 133876 14673 VYGSFASKL True PC9_epitope_Rep3 970.5123823471799 970.51128993586 61.576 2 0.1875354193966583 0.0004893964110929853 0.0012725637571075741 ['ENSG00000155096|ENST00000337198|AZIN1'] 48208 19989 IYPVDLGDKF True PC9_epitope_Rep3 1165.6019256275697 1165.60082993586 82.134 2 0.187519776077463 0.0004893964110929853 0.0012730226600687073 ['nc|ENSG00000163882|P52434-3|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H', 'nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H'] 94907 7249 RTEPFQDGY True H1975_Epitope_Rep2 1111.4934378077498 1111.4923499358601 32.817 2 0.18751349794894306 0.0004893964110929853 0.0012732068781024374 ['ENSG00000164543|ENST00000319357|STK17A'] 140872 15628 YSDVSGLLANY True H1975_Epitope_Rep2 1200.5662683948399 1200.56516993586 65.267 2 0.1875031699895669 0.0004893964110929853 0.0012735099877658317 ['ENSG00000153391|ENST00000334598|INO80C', 'nc|ENSG00000153391|Q6PI98-4|INO80C'] 118503 10516 TYQDIQNTI True NCI_RA007_Epitope_Rep4 1094.52440358286 1094.5233099358602 47.297 2 0.18749850104559196 0.0004893964110929853 0.0012736470378066145 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 75140 16207 NHYNNIMAL True PC9_epitope_Rep3 1088.50731405008 1088.5062099358602 67.477 2 0.18749086896109754 0.0004893964110929853 0.0012738710983558666 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 137186 13515 YAYDGKDYLA True PC9_epitope_Rep1 1177.5291546101298 1177.52804993586 56.842 2 0.18747607040633166 0.0004893964110929853 0.0012743056626867 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 71310 18654 LYQEVFGRL True PC9_epitope_Rep4 1123.6025943339098 1123.6014899358602 79.829 2 0.18747500659100663 0.0004893964110929853 0.0012743369076918852 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 140775 7036 YSDGYGRVY True H1975_Epitope_Rep2 1078.47197408718 1078.47086993586 31.988 2 0.1874595541550266 0.0004893964110929853 0.0012747908432287096 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 47908 14908 IYIKHPHLF True PC9_epitope_Rep5 1166.66004964038 1166.6584049037901 62.348 3 0.1874554693507399 0.0004893964110929853 0.0012749108667898473 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 25301 11913 FDQLLAEEK True PC9_epitope_Rep2 1091.5498900547097 1091.5487899358602 51.148 2 0.18744689466556147 0.0004893964110929853 0.0012751628531060446 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 20821 19688 EQIKFFEEV True PC9_epitope_Rep2 1167.5811901829898 1167.58008993586 81.116 2 0.18743659321337183 0.0004893964110929853 0.0012754656503620831 ['ENSG00000143155|ENST00000367833|TIPRL', 'nc|ENSG00000143155|O75663-2|TIPRL'] 70988 15996 LYHDIFSRL True PC9_epitope_Rep6 1162.61349337078 1162.6118549037901 73.84 3 0.18742493324488704 0.0004893964110929853 0.001275808466336597 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 21901 16606 ESDLPDELLY True H1975_Epitope_Rep2 1192.54994962436 1192.54884993586 69.105 2 0.18741577788426408 0.0004893964110929853 0.001276077708808419 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 130141 6304 VSDSKQFTY True H1975_Epitope_Rep3 1073.50293986229 1073.50184993586 29.253 2 0.18741460168693513 0.0004893964110929853 0.00127611230275731 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 17351 21795 EHDAFIFAL True PC9_epitope_Rep5 1061.51819600361 1061.5170899358602 88.866 2 0.18741306505328664 0.0004893964110929853 0.0012761574991632888 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 85222 9051 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.8 2 0.18741153274526112 0.0004893964110929853 0.0012762025699393944 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 27876 14733 FQDPYTRSL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 61.808 2 0.18740746013093834 0.0004893964110929853 0.0012763223681599215 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 28494 11156 FSDVNMQEY True H1975_Epitope_Rep1 1131.4542754177098 1131.45377496793 47.879 1 0.1874026722799152 0.0004893964110929853 0.0012764632198843456 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 40158 19694 HQDNNFLYL True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 80.803 2 0.18737702560985273 0.0004893964110929853 0.001277217973555241 ['XPNPEP3|p.D217*|1|0.36|ENSG00000196236|chr22:40886370-40886371|-/T|frameshift_variant', 'nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 118078 20145 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.54357496793 82.317 1 0.18736779414806803 0.0004893964110929853 0.0012774897549473062 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 115456 10433 TRMSTVSEL True PC9_epitope_Rep1 1022.5066453437399 1022.5055499358599 45.018 2 0.18736594993577116 0.0004893964110929853 0.0012775440569349795 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 1604 13121 AEFARIMSI True NCI_RA007_Epitope_Rep4 1036.5375515491999 1036.5364499358602 57.568 2 0.18736064687531395 0.0004893964110929853 0.0012777002160189775 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 18352 7127 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.60547496793 31.712 1 0.18735535467275408 0.0004893964110929853 0.001277856074447897 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 137811 5522 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 26.248 2 0.18735225664353822 0.0004893964110929853 0.0012779473220461165 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 140536 19269 YRPETGSWVF True PC9_epitope_Rep2 1240.58767254576 1240.58656993586 79.491 2 0.18734468849129984 0.0004893964110929853 0.0012781702575868496 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 87893 7369 QRIDSDDAL True PC9_epitope_Rep2 1031.4883524273098 1031.48724993586 33.727 2 0.18733722718268256 0.0004893964110929853 0.001278390083994837 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 141064 10255 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 44.452 2 0.18733277694968997 0.0004893964110929853 0.0012785212155989511 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 118206 21999 TYKNFFYLI True PC9_epitope_Rep3 1207.62774645259 1207.62664993586 89.918 2 0.187331536740127 0.0004893964110929853 0.0012785577623059827 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 95249 4090 RVLSSIEQK True NCI_RA007_Epitope_Rep4 1058.60840799034 1058.60730993586 22.01 2 0.1873216314082763 0.0004893964110929853 0.001278849691903829 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 132499 12630 VVDLLAPYAK True NCI_RA007_Epitope_Rep1 1087.62774645259 1087.62664993586 53.108 2 0.18732050957036772 0.0004893964110929853 0.0012788827588842047 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 118541 17213 TYQLGFHSI True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 71.467 2 0.1873192969338193 0.0004893964110929853 0.001278918503183914 ['ENSG00000142507|ENST00000270586|PSMB6'] 27870 21025 FQDPVPLTV True PC9_epitope_Rep5 1014.5385970950199 1014.53807496793 85.93 1 0.18731228073083622 0.0004893964110929853 0.0012791253360606878 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 47157 15657 ITVTSEVPFSK True PC9_epitope_Rep3 1206.6496040959798 1206.6485099358601 65.369 2 0.18730943168635317 0.0004893964110929853 0.001279209333521043 ['ENSG00000116251|ENST00000234875|RPL22'] 140495 14893 YRLLPGPSA True PC9_epitope_Rep1 972.5392658013599 972.53816993586 62.106 2 0.18730469386952256 0.0004893964110929853 0.0012793490292919135 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 82663 23203 PQPDVFPLF True PC9_epitope_Rep5 1058.54368247546 1058.5425899358602 94.231 2 0.18729870136971524 0.0004893964110929853 0.0012795257416245655 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 108714 18416 SYRELFEFF True NCI_RA007_Epitope_Rep5 1236.5815245361598 1236.5804299358601 77.652 2 0.18729818185140454 0.0004893964110929853 0.0012795410628098055 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 48145 20513 IYPHGLVLL True PC9_epitope_Rep5 1023.61170246563 1023.61060993586 83.945 2 0.18729753279137334 0.0004893964110929853 0.0012795602045859863 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 97272 11300 SEAFSINFR True H1975_Epitope_Rep1 1069.51925863277 1069.5181699358602 48.442 2 0.18729637692309437 0.0004893964110929853 0.0012795942936258333 ['CON__P34955'] 134283 16696 VYNPELDKW True PC9_epitope_Rep5 1162.5658744720197 1162.56476993586 69.225 2 0.18729616442477448 0.0004893964110929853 0.0012796005607570828 ['ENSG00000178502|ENST00000319121|KLHL11'] 17354 21694 EHDDFFISL True PC9_epitope_Rep1 1121.50293986229 1121.50184993586 88.276 2 0.1872781321387265 0.0004893964110929853 0.0012801324921510493 ['ENSG00000125676|ENST00000245838|THOC2'] 108386 13753 SYLESFYHM True NCI_RA007_Epitope_Rep3 1175.49574630687 1175.49464993586 61.422 2 0.18727240495484634 0.0004893964110929853 0.001280301483771546 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 141272 8379 YTDKIMTY True H1975_Epitope_Rep3 1033.47903361357 1033.4779299358602 37.213 2 0.18726977925378116 0.0004893964110929853 0.0012803789676290318 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 71536 12547 MADPNIRFL True H1975_Epitope_Rep1 1075.54845058607 1075.5473499358602 53.306 2 0.1872673148747935 0.0004893964110929853 0.0012804516951844024 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 29527 15783 FVHDLVLYL True NCI_RA007_Epitope_Rep3 1117.6171817688898 1117.6160899358601 69.718 2 0.18726618346025584 0.0004893964110929853 0.0012804850863276606 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 46941 20083 ITPDEFHFV True PC9_epitope_Rep5 1103.5287606873098 1103.52766993586 82.299 2 0.1872566491582654 0.0004893964110929853 0.0012807665043801566 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 43434 8065 IGGIGTVPVGR True NCI_RA007_Epitope_Rep3 1024.6029286870798 1024.60182993586 38.809 2 0.18724709230386133 0.0004893964110929853 0.0012810486503219158 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 92856 11948 RPFEDQTSL True PC9_epitope_Rep3 1091.52473793603 1091.52364993586 50.981 2 0.18724513328493203 0.0004893964110929853 0.0012811064939133735 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 111022 8199 THDDSHLVSL True PC9_epitope_Rep6 1122.5305515924601 1122.5289149037899 41.109 3 0.1872439703311627 0.0004893964110929853 0.0012811408334738792 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 90481 4575 RELEDATETA True H1975_Epitope_Rep3 1133.52004647841 1133.51894993586 22.719 2 0.18724190447461267 0.0004893964110929853 0.0012812018361157715 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 131047 10958 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.48110993586 47.181 2 0.1872379748680736 0.0004893964110929853 0.001281317881436211 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 26275 19560 FHFTTPAL True PC9_epitope_Rep1 932.4756029156399 932.4745099358599 80.063 2 0.1872306513882995 0.0004893964110929853 0.0012815341794407123 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 2689 8279 AESSFSQEV True H1975_Epitope_Rep2 982.4243551884199 982.42324993586 36.796 2 0.18722204281393454 0.0004893964110929853 0.001281788479346977 ['ENSG00000047410|ENST00000367478|TPR'] 2322 18765 AEPLEIILHLP True H1975_Epitope_Rep1 1243.71762408615 1243.71652993586 78.242 2 0.18721935074843607 0.0004893964110929853 0.0012818680141640257 ['ENSG00000100138|ENST00000401959|SNU13'] 32447 10380 GFVTFDDHD True NCI_RA007_Epitope_Rep5 1051.42468954159 1051.42358993586 46.555 2 0.18721530917864626 0.0004893964110929853 0.0012819874282427853 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 90416 11550 REIFFPETA True H1975_Epitope_Rep2 1108.5553097883198 1108.5542099358602 49.489 2 0.18721132912570596 0.0004893964110929853 0.0012821050356151267 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 104080 13531 SQDSKLVYI True PC9_epitope_Rep2 1051.5549754351498 1051.5538699358601 57.338 2 0.18720477848785602 0.0004893964110929853 0.001282298625261083 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 1075 5611 AEAIHSPQV True H1975_Epitope_Rep3 950.4821448480601 950.48104993586 26.619 2 0.18719578417063704 0.0004893964110929853 0.001282564480199563 ['ENSG00000047410|ENST00000367478|TPR'] 97085 12919 SDGIYIINLK True H1975_Epitope_Rep1 1134.62847472858 1134.62736993586 54.768 2 0.1871953650237983 0.0004893964110929853 0.0012825768707316672 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 48793 9482 KDLYANTVL True H1975_Epitope_Rep1 1035.5600608155898 1035.5589699358602 41.392 2 0.18718279037242377 0.0004893964110929853 0.0012829486497811123 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 30248 20962 FYVPAEPKLAF True PC9_epitope_Rep1 1280.68051030144 1280.6794099358601 85.453 2 0.18717772010934586 0.0004893964110929853 0.0012830985864936088 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 2646 8237 AESLGQYAA True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 36.636 1 0.18717411438604847 0.0004893964110929853 0.0012832052248438054 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 139603 19084 YLYDLNHTL True PC9_epitope_Rep2 1150.5658744720201 1150.56476993586 78.771 2 0.1871626739982198 0.0004893964110929853 0.0012835436302269098 ['ENSG00000110057|ENST00000227471|UNC93B1'] 24615 20795 FAIPLIEKL True PC9_epitope_Rep4 1042.64266824074 1042.6415699358602 88.136 2 0.18715800478012895 0.0004893964110929853 0.001283681770879406 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 108947 9044 TADVHGLYY True H1975_Epitope_Rep2 1037.48181049489 1037.4807099358602 39.741 2 0.18715383720814263 0.0004893964110929853 0.0012838050827232413 ['ENST00000476493.5_1_1:33099602-33116090:-|nuORF'] 31968 6139 GEPTNFVHTA True NCI_RA007_Epitope_Rep3 1071.49852318819 1071.49742993586 31.137 2 0.18715367244207295 0.0004893964110929853 0.0012838099581338825 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 133693 6782 VYASDRATF True NCI_RA007_Epitope_Rep4 1028.4927095317598 1028.4916099358602 32.708 2 0.18714772886803693 0.0004893964110929853 0.0012839858402752125 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 106178 8672 STDPREALQY True H1975_Epitope_Rep2 1178.5567663402999 1178.5556699358601 38.318 2 0.18714693221255516 0.0004893964110929853 0.0012840094167264374 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 18877 7191 ELDSNLYR True H1975_Epitope_Rep3 1008.48762415132 1008.48652993586 32.636 2 0.18714205847019247 0.0004893964110929853 0.0012841536611075475 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 114565 19156 TQDAVPLTL True PC9_epitope_Rep4 956.51786165044 956.51676993586 81.781 2 0.18714123038162908 0.0004893964110929853 0.0012841781710184273 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 54194 11915 KVVDVDVKL True PC9_epitope_Rep2 1013.6120963884499 1013.61098993586 51.156 2 0.18714093385866337 0.0004893964110929853 0.0012841869476713263 ['ENSG00000101350|ENST00000375712|KIF3B'] 48043 22438 IYLPYLQNW True PC9_epitope_Rep4 1208.6229954253201 1208.62188993586 94.54 2 0.18714016582319848 0.0004893964110929853 0.0012842096806949868 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 108703 13359 SYREDPIVY True PC9_epitope_Rep3 1140.5451390274397 1140.5440499358601 56.419 2 0.1871377936142689 0.0004893964110929853 0.0012842798980751606 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 6392 4797 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 25.921 2 0.18712921891310674 0.0004893964110929853 0.0012845337413166329 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 95964 8725 RYLEQLHQL True NCI_RA007_Epitope_Rep4 1198.64585612822 1198.64422490379 40.352 3 0.18712884864955612 0.0004893964110929853 0.0012845447036360712 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 139153 14037 YLDTVPEVY True H1975_Epitope_Rep2 1097.52809198097 1097.52698993586 59.145 2 0.18712803132895348 0.0004893964110929853 0.0012845689022169071 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 6686 10758 AQAEVYKEL True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 46.268 2 0.18711287997290613 0.0004893964110929853 0.0012850175743312432 ['ENSG00000169710|ENST00000306749|FASN'] 113191 9877 TLQALQIPAAK True H1975_Epitope_Rep1 1152.6866583110398 1152.68556993586 42.925 2 0.18710714048427934 0.0004893964110929853 0.0012851875769418508 ['ENSG00000140575|ENST00000268182|IQGAP1'] 65320 8255 LRDEHNYTL True PC9_epitope_Rep3 1159.56218607391 1159.56055490379 36.729 3 0.1870977814164569 0.0004893964110929853 0.0012854648391910672 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 53656 11376 KSDEMELLY True H1975_Epitope_Rep3 1126.5216267015398 1126.5205299358602 48.869 2 0.18709701127315728 0.0004893964110929853 0.0012854876573452686 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000493082.5_1_5:850626-880074:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-2|BRD9', 'ENST00000495794.5_1_5:864585-881375:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-3|BRD9', 'nc|ENSG00000028310|Q9H8M2-1|BRD9', 'ENST00000495265.5_1_5:864585-889814:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-6|BRD9'] 75270 4044 NIIHGSDSVK True NCI_RA007_Epitope_Rep2 1068.5563724174801 1068.55526993586 20.369 2 0.18709334313121626 0.0004893964110929853 0.001285596344287576 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF'] 38969 16943 HHIYLEGTLL True PC9_epitope_Rep2 1194.6397081186199 1194.63805490379 70.412 3 0.18709262736087967 0.0004893964110929853 0.001285617553616641 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 23658 21642 EYAHLFEVF True PC9_epitope_Rep5 1153.5444107514497 1153.5433099358602 88.29 2 0.18707090672087065 0.0004893964110929853 0.001286261335023728 ['nc|ENSG00000130803|Q96PQ6-3|ZNF317', 'nc|ENSG00000130803|Q96PQ6-4|ZNF317', 'ENST00000591278.5_1_19:9268612-9272106:+|nuORF', 'ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317'] 137180 12253 YAYDGKDYL True PC9_epitope_Rep6 1106.4920408254197 1106.49094993586 58.509 2 0.18706839182465174 0.0004893964110929853 0.0012863358952943445 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 97392 9260 SEDSRFITV True H1975_Epitope_Rep1 1052.51383889916 1052.51274993586 40.53 2 0.1870513647025804 0.0004893964110929853 0.0012868408201044705 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'PTPRG|p.F707L|1|0.16|ENSG00000144724|chr3:62203914-62203914|T/C|missense_variant'] 54952 16550 KYQDVYVEL True PC9_epitope_Rep2 1155.5811901829898 1155.58008993586 68.898 2 0.18705071051097827 0.0004893964110929853 0.001286860223562609 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 116573 20109 TTYEGIFKTL True PC9_epitope_Rep5 1171.6124903112698 1171.6113899358602 82.396 2 0.18704343043926108 0.0004893964110929853 0.0012870761717887864 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 34713 6534 GQDVGRYQV True PC9_epitope_Rep6 1020.49885754136 1020.49776993586 33.807 2 0.18704224969206923 0.0004893964110929853 0.0012871111996286743 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 31661 9907 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 43.043 2 0.18703493839100185 0.0004893964110929853 0.0012873281166894414 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 35731 6831 GTGIVSAPVPK True NCI_RA007_Epitope_Rep5 1024.59169529704 1024.5905899358602 32.96 2 0.18702431098927508 0.0004893964110929853 0.0012876434836175355 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 88837 6084 QVASTLKQV True PC9_epitope_Rep2 972.5603951687598 972.55928993586 28.794 2 0.1870163726540865 0.0004893964110929853 0.0012878791033370028 ['ENSG00000166295|ENST00000299381|ANAPC16'] 9826 17021 AYLEAIHNF True PC9_epitope_Rep4 1076.52909504048 1076.5279899358602 73.464 2 0.18701435832403476 0.0004893964110929853 0.0012879388980478693 ['ENSG00000042753|ENST00000263270|AP2S1'] 54871 21999 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 89.645 2 0.1870059633350648 0.0004893964110929853 0.0012881881304462508 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 77670 8814 NTIDPSHPM True PC9_epitope_Rep5 1010.4491304676201 1010.44802993586 38.848 2 0.18699994745671403 0.0004893964110929853 0.0012883667609889815 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 21518 16263 ERMEQMYTL True PC9_epitope_Rep5 1199.53148019259 1199.53038993586 67.547 2 0.18699815695025754 0.0004893964110929853 0.0012884199316098033 ['nc|ENSG00000130762|Q5VV41-2|ARHGEF16', 'ENSG00000130762|ENST00000378378|ARHGEF16', 'ENST00000485984.1_1_1:3389348-3394597:+|nuORF'] 76448 15773 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 65.829 2 0.18699513276394528 0.0004893964110929853 0.0012885097424047778 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 1512 6255 AEEMETGNVA True H1975_Epitope_Rep3 1049.4335399731299 1049.43297496793 29.071 1 0.18699421340230887 0.0004893964110929853 0.001288537046397589 ['ENSG00000162783|ENST00000367577|IER5'] 137801 11090 YEQLSSEALEA True H1975_Epitope_Rep1 1238.56666231766 1238.5655699358601 47.621 2 0.18699356861695682 0.0004893964110929853 0.0012885561961337333 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 140926 9628 YSELASHVVSY True H1975_Epitope_Rep3 1253.59281749585 1253.59172993586 42.05 2 0.18699020993800408 0.0004893964110929853 0.001288655951487149 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 92477 7367 RLVESKVEL True NCI_RA007_Epitope_Rep4 1071.62880908175 1071.6277099358601 34.977 2 0.18698670799487133 0.0004893964110929853 0.001288759970141439 ['ENST00000452767.1_1_10:71914847-71917573:-|nuORF', 'nc|ENSG00000079332|Q9NR31-2|SAR1A', 'ENSG00000079332|ENST00000373241|SAR1A'] 9998 21318 AYPPAPFMHIL True PC9_epitope_Rep5 1255.64235097091 1255.64124993586 87.054 2 0.18698317107660442 0.0004893964110929853 0.0012888650362101722 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 30252 20884 FYVPAEPKLAF True PC9_epitope_Rep5 1280.68051030144 1280.6794099358601 85.382 2 0.1869813248328747 0.0004893964110929853 0.001288919883288944 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 31311 18638 GDLENAFLNL True H1975_Epitope_Rep3 1104.54513902744 1104.5440499358601 78.155 2 0.18695399551522404 0.0004893964110929853 0.0012897320396498032 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 58853 13888 LESTPSPVVF True H1975_Epitope_Rep3 1074.55972646242 1074.5586299358602 58.73 2 0.18695107544232759 0.0004893964110929853 0.0012898188469644878 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 115048 12949 TRDAGYGGLSL True PC9_epitope_Rep6 1108.5512870370399 1108.55018993586 61.358 2 0.18694974952955198 0.0004893964110929853 0.0012898582653549995 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 115633 9866 TRVSQINTL True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 42.809 2 0.1869480845423991 0.0004893964110929853 0.0012899077658823765 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 47909 15006 IYIKHPHLF True PC9_epitope_Rep5 1166.66004964038 1166.6584049037901 62.724 3 0.18694720504986853 0.0004893964110929853 0.0012899339142065937 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 9833 17913 AYLEAYKEF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 73.694 2 0.18694589497424077 0.0004893964110929853 0.0012899728652466982 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 120647 6152 VEILANDQGNR True NCI_RA007_Epitope_Rep1 1227.6207635791898 1227.6191249037902 27.967 3 0.18693681661623113 0.0004893964110929853 0.0012902428144942024 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 39104 10949 HHVLQNDVL True PC9_epitope_Rep5 1073.56179215109 1073.5606899358602 47.105 2 0.18693062546372607 0.0004893964110929853 0.001290426943806479 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 87767 11993 QRDETALQL True PC9_epitope_Rep1 1072.5512870370399 1072.55018993586 50.994 2 0.1869233477963774 0.0004893964110929853 0.0012906434205313586 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 32644 10674 GGNFGFGDSR True PC9_epitope_Rep3 1012.4362572847999 1012.43516993586 46.003 2 0.1869210428353155 0.0004893964110929853 0.001290711989983712 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 29312 16574 FVDDYTVRV True PC9_epitope_Rep5 1112.55022440788 1112.54912993586 68.756 2 0.18691984661228012 0.0004893964110929853 0.001290747577429276 ['ENSG00000115233|ENST00000409682|PSMD14'] 142400 11987 YYEYNHDLF True NCI_RA007_Epitope_Rep4 1262.5244035828598 1262.5233099358602 53.113 2 0.18691402245383346 0.0004893964110929853 0.001290920859273167 ['ENSG00000151748|ENST00000324679|SAV1'] 31610 10294 GEEWKGYVV True H1975_Epitope_Rep1 1065.5131106231697 1065.51200993586 44.54 2 0.18691231233904138 0.0004893964110929853 0.0012909717434724797 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000497406.2_1_12:59414000-59414099:+|nuORF', 'ENST00000397390.3_1_9:19200870-19200993:-|nuORF'] 89747 12509 RAFPALTSL True NCI_RA007_Epitope_Rep5 974.5549158655 974.55380993586 54.771 2 0.18690979535709032 0.0004893964110929853 0.0012910466395359783 ['ENSG00000170458|ENST00000302014|CD14'] 11923 18363 DHMRFISEL True PC9_epitope_Rep1 1146.54917886206 1146.5480899358602 75.424 2 0.1868978340651949 0.0004893964110929853 0.001291402622835755 ['ENSG00000273749|ENST00000617928|CYFIP1'] 24034 20012 EYNNIFHTF True PC9_epitope_Rep3 1183.52982331647 1183.5287299358602 82.224 2 0.18689361630168563 0.0004893964110929853 0.0012915281723211002 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 111324 12268 THNIIVNQL True PC9_epitope_Rep4 1050.5821932425 1050.58108993586 55.006 2 0.1868907206240545 0.0004893964110929853 0.0012916143745735449 ['ENSG00000198356|ENST00000357332|GET3'] 76760 8563 NQWDGTQHGV True PC9_epitope_Rep3 1140.49483479008 1140.49372993586 37.89 2 0.1868876118127721 0.0004893964110929853 0.0012917069280826102 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 73306 8381 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46340993586 37.165 2 0.1868852085786563 0.0004893964110929853 0.0012917784801631817 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 13499 8543 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep2 1091.49172393603 1091.4906299358602 37.874 2 0.18687781822128552 0.0004893964110929853 0.0012919985399890293 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 29867 9572 FVTFESPADAK True H1975_Epitope_Rep3 1210.5870038394198 1210.5859099358602 41.827 2 0.18687396967041356 0.0004893964110929853 0.0012921131516870292 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'ENSG00000175718|ENST00000424776|RBMXL3', 'ENSG00000147274|ENST00000320676|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX'] 18357 9250 EITALAPSTM[Oxidation]K True PC9_epitope_Rep1 1176.6060254122801 1176.6049299358601 40.432 2 0.18685724015874478 0.0004893964110929853 0.0012926114830613888 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 71922 7750 MEQLLSQGHQP True H1975_Epitope_Rep2 1266.6026709869 1266.6015699358602 34.764 2 0.18685195007870853 0.0004893964110929853 0.0012927691017422295 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 53811 12005 KTEDPDLPAFY True H1975_Epitope_Rep1 1294.6081332068197 1294.60702993586 51.185 2 0.18685180504535992 0.0004893964110929853 0.0012927734233026558 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 142279 14026 YYAEVETRI True PC9_epitope_Rep1 1142.5607890915799 1142.5596899358602 58.79 2 0.18684786902569306 0.0004893964110929853 0.0012928907104576906 ['ENSG00000112685|ENST00000230449|EXOC2'] 118947 12446 VADTVARVL True PC9_epitope_Rep1 942.5498304850598 942.54872993586 52.739 2 0.18684123784360226 0.0004893964110929853 0.0012930883333114038 ['ENSG00000145632|ENST00000274289|PLK2'] 70790 17296 LYANM[Oxidation]FERL True PC9_epitope_Rep3 1171.56958033391 1171.56848993586 71.702 2 0.18683729772202542 0.0004893964110929853 0.0012932057713733803 ['ENSG00000004478|ENST00000001008|FKBP4'] 78597 12812 NYSNIRFQF True NCI_RA007_Epitope_Rep4 1187.57235683479 1187.5712499358601 56.36 2 0.18683508348070688 0.0004893964110929853 0.001293271773067418 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 26525 12763 FIGNLNTLVVK True H1975_Epitope_Rep3 1216.71795843932 1216.7168699358601 54.307 2 0.1868323313474339 0.0004893964110929853 0.0012933538128519933 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 89662 15692 QYVDFHNQL True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 65.501 2 0.18682577812505433 0.0004893964110929853 0.0012935491822981362 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 111341 5230 THNPTNATL True PC9_epitope_Rep5 967.47230844035 967.47120993586 25.132 2 0.18682488382096127 0.0004893964110929853 0.0012935758462382376 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 49091 7851 KEIEGIFHA True H1975_Epitope_Rep3 1042.54474510462 1042.54364993586 35.175 2 0.18682192751043397 0.0004893964110929853 0.001293663993429146 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 107845 20272 SVVESVFKL True PC9_epitope_Rep5 1006.5698972232999 1006.56880993586 83.027 2 0.1868156961016638 0.0004893964110929853 0.001293849812706564 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 61054 20246 LIGEFLEKV True PC9_epitope_Rep2 1046.60119735158 1046.60010993586 83.296 2 0.18681175420646742 0.0004893964110929853 0.0012939673729949373 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 49902 21993 KIIDIFTTL True PC9_epitope_Rep3 1062.6324974798601 1062.6314099358601 89.895 2 0.18681140772709323 0.0004893964110929853 0.0012939777066621652 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 54100 17795 KVLNELTQL True PC9_epitope_Rep3 1056.6179100448799 1056.6168099358601 73.648 2 0.18681140614884506 0.0004893964110929853 0.0012939777537332403 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 106886 13452 SVDEYQVGQLY True H1975_Epitope_Rep2 1299.59829679911 1299.5971899358601 56.877 2 0.18680846363836234 0.0004893964110929853 0.0012940655167660298 ['ENSG00000174238|ENST00000313486|PITPNA'] 116234 14195 TTDELEKLLY True H1975_Epitope_Rep2 1223.62853429823 1223.6274299358602 59.752 2 0.18680821380306176 0.0004893964110929853 0.0012940729686043444 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant'] 133543 17672 VWSDVTPLTF True NCI_RA007_Epitope_Rep3 1163.58627556343 1163.5851699358602 77.488 2 0.1868071497145944 0.0004893964110929853 0.0012941047076562779 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 128538 4801 VPSYPSKSA True PC9_epitope_Rep1 934.47599683846 934.47488993586 23.336 2 0.18680698380352936 0.0004893964110929853 0.0012941096564315915 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 14776 9629 DVNQQEFVR True PC9_epitope_Rep5 1133.5465360097699 1133.54542993586 42.002 2 0.18680648793908455 0.0004893964110929853 0.001294124447129756 ['ENSG00000105372|ENST00000598742|RPS19'] 1931 7867 AEILNGKEISA True H1975_Epitope_Rep2 1143.61355294043 1143.61244993586 35.206 2 0.18680442732449584 0.0004893964110929853 0.0012941859131794342 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 92372 17486 RLPETLPSL True PC9_epitope_Rep4 1024.59169529704 1024.5905899358602 75.262 2 0.18680390527179164 0.0004893964110929853 0.0012942014859483955 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 7871 12940 ATADYICKV True PC9_epitope_Rep5 982.4793679667399 982.47826993586 54.785 2 0.18679721459367785 0.0004893964110929853 0.0012944010846983461 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 78369 12400 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.6069699358602 55.501 2 0.18679140437652209 0.0004893964110929853 0.0012945744422508591 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 78452 18322 NYLVLPNRI True PC9_epitope_Rep4 1100.63422881536 1100.63312993586 78.544 2 0.18678723110677897 0.0004893964110929853 0.00129469897310027 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 45880 9068 ISDSDYQAEY True H1975_Epitope_Rep3 1189.47751296009 1189.4764099358601 39.865 2 0.18678108164161972 0.0004893964110929853 0.001294882495733811 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 139926 12136 YQAEHLLQT True PC9_epitope_Rep1 1101.5454733806098 1101.54436993586 51.543 2 0.18677545459628844 0.0004893964110929853 0.0012950504502896925 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ADAM8|p.Q214Rfs*17|1|0.52|ENSG00000151651|chr10:133272862-133272862|T/-|frameshift_variant', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 24002 9042 EYMKHTRLF True PC9_epitope_Rep2 1223.6121134717898 1223.61046490379 40.126 3 0.18677230774475984 0.0004893964110929853 0.0012951443862003807 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 138475 12646 YHQPAPIAQL True PC9_epitope_Rep4 1136.5978433066398 1136.59674993586 56.483 2 0.18676229264686922 0.0004893964110929853 0.0012954433899506996 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF'] 68051 11902 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48076993586 50.782 2 0.18674583732107095 0.0004893964110929853 0.0012959348189006956 ['ENSG00000174231|ENST00000304992|PRPF8'] 27872 19036 FQDPVPLTV True PC9_epitope_Rep6 1014.5385970950199 1014.53807496793 85.864 1 0.18673837200093227 0.0004893964110929853 0.001296157828062868 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 112038 7849 TISNDGATILK True NCI_RA007_Epitope_Rep2 1131.6135529404298 1131.61244993586 35.159 2 0.1867342601342094 0.0004893964110929853 0.001296280676995164 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7'] 22228 15026 ESYSIYVYK True PC9_epitope_Rep5 1150.55464108198 1150.55354993586 62.801 2 0.18672262222907518 0.0004893964110929853 0.0012966284422534144 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 31318 10749 GDLGIEIPAEK True H1975_Epitope_Rep1 1140.60265390356 1140.60154993586 46.308 2 0.18672038286796488 0.0004893964110929853 0.0012966953698361505 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 111281 10601 THLLNQDTL True PC9_epitope_Rep6 1053.54547338061 1053.54436993586 51.595 2 0.18672009441390305 0.0004893964110929853 0.0012967039910883479 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 38574 5493 HEVKDNYIP True H1975_Epitope_Rep2 1113.5454733806098 1113.54436993586 26.141 2 0.1867062950490966 0.0004893964110929853 0.0012971164906326845 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 42134 12248 IDNNIEQISSY True NCI_RA007_Epitope_Rep5 1294.60411045554 1294.6030099358602 53.761 2 0.1866979431629577 0.0004893964110929853 0.0012973662145178183 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 107846 18118 SVVESVFKL True PC9_epitope_Rep6 1006.5698972232999 1006.56880993586 82.326 2 0.1866829803400889 0.0004893964110929853 0.0012978137279072255 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 21688 4058 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 22.458 2 0.18668182597115282 0.0004893964110929853 0.0012978482596100592 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 106381 9379 STIEYVIQR True NCI_RA007_Epitope_Rep1 1107.59242357303 1107.5913299358601 40.475 2 0.18667999939627944 0.0004893964110929853 0.001297902901510951 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 7555 6084 ASEIAVGHQY True H1975_Epitope_Rep2 1073.51417325233 1073.5130699358601 28.377 2 0.18667940237853578 0.0004893964110929853 0.001297920761768572 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 94888 6772 RTDPVVADY True H1975_Epitope_Rep2 1034.50327421546 1034.5021699358601 30.964 2 0.1866750242322704 0.0004893964110929853 0.0012980517450026454 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 14187 13933 DSDSVPAFY True H1975_Epitope_Rep2 999.4185415319898 999.41744993586 58.742 2 0.18666766719697628 0.0004893964110929853 0.0012982718790218244 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 128868 14284 VQDRFEVNV True PC9_epitope_Rep1 1104.55637241748 1104.55526993586 59.769 2 0.18666551811579396 0.0004893964110929853 0.0012983361899593093 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 48082 7881 IYNGDMEKI True NCI_RA007_Epitope_Rep3 1081.51139637101 1081.51028993586 38.116 2 0.18666194858589855 0.0004893964110929853 0.001298443014672477 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 103883 13901 SQADAFFKA True PC9_epitope_Rep3 983.47124581119 983.47014993586 58.552 2 0.18666056811008575 0.0004893964110929853 0.0012984843302996441 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L'] 92079 3974 RKVQTQVRL True NCI_RA007_Epitope_Rep4 1126.69347502698 1126.69183490379 21.529 3 0.18664631429904394 0.0004893964110929853 0.0012989110031318787 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1', 'ENST00000490041.1_1_7:8198147-8258054:-|nuORF'] 52440 7066 KKSDFQVNL True NCI_RA007_Epitope_Rep3 1077.5818588893299 1077.5807699358602 34.91 2 0.18663471301919324 0.0004893964110929853 0.0012992583789811587 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 75071 10262 NHVASDISL True PC9_epitope_Rep2 954.47705946762 954.47596993586 44.806 2 0.18662850049152702 0.0004893964110929853 0.001299444438302477 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 23948 17985 EYLLKVNEI True PC9_epitope_Rep4 1119.61757569171 1119.61646993586 77.233 2 0.18662833666664347 0.0004893964110929853 0.0012994493450640687 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 134078 9877 VYKPAQNSW True PC9_epitope_Rep5 1091.5399940773498 1091.5388899358602 42.962 2 0.1866274257205717 0.0004893964110929853 0.0012994766293849855 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 64530 12739 LPRPQGITV True PC9_epitope_Rep2 979.5814649665099 979.58036993586 54.305 2 0.18662510976295907 0.0004893964110929853 0.0012995459986796891 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 27823 16810 FQDENHLYL True PC9_epitope_Rep3 1177.54038800017 1177.53928993586 69.81 2 0.18661941282696937 0.0004893964110929853 0.0012997166533650411 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 70889 20006 LYEKDIQLF True PC9_epitope_Rep1 1167.6175756917098 1167.61646993586 81.781 2 0.1866176784640135 0.0004893964110929853 0.0012997686115714762 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 54396 20404 KYFEVPSVL True PC9_epitope_Rep5 1080.5855472874398 1080.5844499358602 83.521 2 0.18660889436965228 0.0004893964110929853 0.001300031798266694 ['ENSG00000131966|ENST00000254286|ACTR10'] 116524 13204 TTSHLMGMFY True H1975_Epitope_Rep3 1186.51510185246 1186.51400993586 56.043 2 0.186608810680322 0.0004893964110929853 0.0013000343060010132 ['ENSG00000168496|ENST00000305885|FEN1'] 43367 8499 IGAEVYHNLK True PC9_epitope_Rep5 1142.60840799034 1142.6067749037902 37.633 3 0.1866070901048861 0.0004893964110929853 0.0013000858637801736 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 11943 12911 DHM[Oxidation]RFISEL True PC9_epitope_Rep2 1162.54409386206 1162.54298993586 54.958 2 0.18660232134740107 0.0004893964110929853 0.001300228772352443 ['ENSG00000273749|ENST00000617928|CYFIP1'] 84883 5799 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 27.331 1 0.18660225180439585 0.0004893964110929853 0.0013002308565110837 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 116340 7762 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 34.806 2 0.18659684035033167 0.0004893964110929853 0.0013003930445400216 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 24055 12034 EYNSDLHQF True PC9_epitope_Rep1 1151.4883524273098 1151.48724993586 51.149 2 0.18659129103628147 0.0004893964110929853 0.001300559385467111 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 130986 6636 VTDPEKLNNY True H1975_Epitope_Rep1 1191.57716743171 1191.57606993586 30.58 2 0.18658118654327738 0.0004893964110929853 0.0013008623228603815 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'DOT1L|p.D1250Efs*47|1|0.2|ENSG00000104885|chr19:2226271-2226293|CATCGGCCTGGCCAAGTCGGCGG/-|frameshift_variant', 'ENSG00000104885|ENST00000398665|DOT1L', 'DOT1L|p.N522Tfs*35|1|0.31|ENSG00000104885|chr19:2213545-2213545|A/-|frameshift_variant'] 24081 12254 EYPDRIMNTF True NCI_RA007_Epitope_Rep5 1284.5808729131597 1284.5797699358602 53.786 2 0.18656743931003705 0.0004893964110929853 0.0013012745848855083 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 77153 12871 NRPNLYYEV True PC9_epitope_Rep4 1166.57202248162 1166.57092993586 57.383 2 0.1865673026190635 0.0004893964110929853 0.001301278684731352 ['ENSG00000004700|ENST00000444129|RECQL'] 96148 12933 RYPDNLKHLYL True PC9_epitope_Rep4 1430.76703389006 1430.7653849037902 57.632 3 0.18656304692179546 0.0004893964110929853 0.0013014063346245414 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59'] 137678 4068 YEKDDKLTP True NCI_RA007_Epitope_Rep4 1107.54480467427 1107.54370993586 21.92 2 0.1865624345180156 0.0004893964110929853 0.0013014247047455373 ['ENSG00000092820|ENST00000367075|EZR'] 134474 19789 VYPQYVIEY True PC9_epitope_Rep4 1172.57537652656 1172.57426993586 84.244 2 0.18655984353179048 0.0004893964110929853 0.0013015024287791855 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 90567 7554 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 34.049 2 0.18655960267320584 0.0004893964110929853 0.0013015096542568925 ['ENSG00000026025|ENST00000544301|VIM'] 47389 17624 IVIRGLNTI True PC9_epitope_Rep5 997.62841515893 997.62730993586 72.802 2 0.18655219217887006 0.0004893964110929853 0.0013017319801295261 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 95677 9875 RYFENPQVI True NCI_RA007_Epitope_Rep3 1164.5927579262 1164.5916699358602 45.919 2 0.18654504341799683 0.0004893964110929853 0.0013019464896863913 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 42993 9644 IESWIEEKA True H1975_Epitope_Rep2 1103.54989005471 1103.5487899358602 42.074 2 0.18654193149744797 0.0004893964110929853 0.001302039878714889 ['ZDHHC6|p.D264Ifs*28|1|0.15|ENSG00000023041|chr10:112434410-112434410|C/-|frameshift_variant', 'nc|ENSG00000023041|Q9H6R6-2|ZDHHC6', 'ENSG00000023041|ENST00000369405|ZDHHC6'] 103877 9008 SPYSGPKFNSA True PC9_epitope_Rep2 1153.54038800017 1153.53928993586 40.0 2 0.18654137727305328 0.0004893964110929853 0.0013020565117455964 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 53309 20776 KQLEDILVL True PC9_epitope_Rep1 1069.63831113629 1069.63720993586 84.743 2 0.18653258137719736 0.0004893964110929853 0.0013023205171056394 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 130095 13790 VSDMVEDLY True H1975_Epitope_Rep3 1069.4637774722498 1069.46268993586 58.346 2 0.18653252675797768 0.0004893964110929853 0.0013023221566477003 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 113653 16598 TLVYHVVGV True PC9_epitope_Rep5 985.5596668927699 985.55856993586 68.849 2 0.1865244856033847 0.0004893964110929853 0.001302563556001699 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 14365 5541 DSYVGDEAQTK True NCI_RA007_Epitope_Rep2 1211.5306111621096 1211.52950993586 26.17 2 0.18652269761075266 0.0004893964110929853 0.0013026172385017252 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 6015 16523 APIWLEHAA True PC9_epitope_Rep5 1006.5236157372199 1006.52250993586 68.556 2 0.1865203925659297 0.0004893964110929853 0.0013026864481942028 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 40798 11621 HRYGDSEFTV True PC9_epitope_Rep3 1209.54145062933 1209.5403499358601 49.716 2 0.18651614884492437 0.0004893964110929853 0.0013028138768866738 ['ENSG00000169813|ENST00000682386|HNRNPF'] 66379 12385 LSGHLETVIL True NCI_RA007_Epitope_Rep1 1080.61791004488 1080.6168099358601 52.15 2 0.18651394812056116 0.0004893964110929853 0.0013028799642443498 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 40236 10843 HQIEAVDGEEL True PC9_epitope_Rep6 1238.5778957076998 1238.57678993586 52.567 2 0.18650983333756008 0.0004893964110929853 0.0013030035394555421 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 60890 12769 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 54.421 2 0.18649975905554989 0.0004893964110929853 0.0013033061400113124 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 15513 5851 EANEILQR True NCI_RA007_Epitope_Rep2 971.5036085686299 971.50250993586 27.377 2 0.18649734831636144 0.0004893964110929853 0.001303378561673212 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF', 'ENST00000407347.2_1_6:18367150-18368330:-|nuORF', 'ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 140238 14860 YQYPVIIHL True H1975_Epitope_Rep2 1144.6280808057597 1144.6269899358601 62.312 2 0.1864857057802473 0.0004893964110929853 0.0013037283750113261 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 105292 14239 SRMDGEGQLTL True PC9_epitope_Rep3 1205.5710365054497 1205.56992993586 59.855 2 0.18647457781895144 0.0004893964110929853 0.00130406281532809 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 43813 8964 IHSEPLGV True PC9_epitope_Rep2 850.45486747106 850.45376993586 39.836 2 0.18647401673731945 0.0004893964110929853 0.0013040796803814089 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 134680 14619 VYTDFAFRI True NCI_RA007_Epitope_Rep3 1130.5760452328998 1130.57494993586 64.85 2 0.18647301677204053 0.0004893964110929853 0.0013041097379896695 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 14010 18333 DRFEFPEQL True PC9_epitope_Rep6 1179.5560380643099 1179.5549499358601 83.16 2 0.18647215440919537 0.0004893964110929853 0.0013041356600119887 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 130823 9699 VTARIALQY True H1975_Epitope_Rep3 1033.59202965021 1033.59092993586 42.328 2 0.18646792578845256 0.0004893964110929853 0.0013042627768621714 ['ENSG00000126790|ENST00000247194|L3HYPDH'] 85387 5183 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 25.009 2 0.1864667972068859 0.0004893964110929853 0.0013042967053277313 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 53670 4363 KSDSGKPYYY True H1975_Epitope_Rep2 1206.55570371114 1206.55460993586 21.896 2 0.18646495679888841 0.0004893964110929853 0.0013043520352773409 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 23955 23188 EYLPIGGLAEF True PC9_epitope_Rep1 1207.6124903112698 1207.6113899358602 93.987 2 0.18646476590850444 0.0004893964110929853 0.001304357774332596 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 24769 7817 FASHVSPEV True PC9_epitope_Rep6 971.47124581119 971.47014993586 39.459 2 0.18645881936159805 0.0004893964110929853 0.001304536567944519 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 2532 4167 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 21.146 2 0.18645823100674525 0.0004893964110929853 0.0013045542592253604 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 115462 10314 TRMSTVSEL True PC9_epitope_Rep5 1022.5066453437399 1022.5055499358599 44.658 2 0.1864537708160991 0.0004893964110929853 0.0013046883808143959 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 104038 4813 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 23.383 2 0.1864507746552018 0.0004893964110929853 0.0013047784855902743 ['ENSG00000130935|ENST00000253247|NOL11'] 45695 10196 IRLENEIQTY True NCI_RA007_Epitope_Rep5 1277.66156576201 1277.6604699358602 45.85 2 0.18643999771801453 0.0004893964110929853 0.001305102636419377 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 77115 8558 NRMLAQQAV True PC9_epitope_Rep1 1029.53894853153 1029.53784993586 37.756 2 0.1864304880954194 0.0004893964110929853 0.001305388735756954 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 72480 5724 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 27.086 2 0.18642686714162032 0.0004893964110929853 0.001305497689570249 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 17125 5811 EGM[Oxidation]NIVEAM[Oxidation]ER True NCI_RA007_Epitope_Rep1 1309.5642376337298 1309.5631299358602 26.658 2 0.1864249690356773 0.0004893964110929853 0.001305554806859963 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 84294 19647 PYRLIFEKF True PC9_epitope_Rep5 1211.6702799709099 1211.66863490379 80.628 3 0.1864236343589363 0.0004893964110929853 0.0013055949710908347 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 32041 13017 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.4912699358601 55.307 2 0.18642323421593027 0.0004893964110929853 0.0013056070127768053 ['ENSG00000051523|ENST00000261623|CYBA'] 139263 19848 YLINEIDRI True PC9_epitope_Rep2 1147.62372370131 1147.62262993586 81.737 2 0.18642105148946816 0.0004893964110929853 0.0013056727005197814 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 25785 11334 FEVQVGPEA True H1975_Epitope_Rep3 974.4709114580198 974.4703649679301 48.706 1 0.18642020836483073 0.0004893964110929853 0.0013056980746981425 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 53239 20599 KQFGNILIL True PC9_epitope_Rep3 1044.6331661861998 1044.63206993586 84.502 2 0.18641525161733752 0.0004893964110929853 0.0013058472600229471 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 48374 15550 IYTKIMDLI True NCI_RA007_Epitope_Rep5 1108.620218544 1108.6191299358602 66.512 2 0.18640619087902321 0.0004893964110929853 0.0013061200090612717 ['nc|ENSG00000173852|Q2PZI1|DPY19L1', 'ENSG00000173852|ENST00000638088|DPY19L1'] 14774 9681 DVNQQEFVR True PC9_epitope_Rep3 1133.5465360097699 1133.54542993586 42.186 2 0.18639904693712703 0.0004893964110929853 0.0013063350983874553 ['ENSG00000105372|ENST00000598742|RPS19'] 75406 11896 NIVEKLREV True PC9_epitope_Rep4 1098.6397081186199 1098.6386099358601 53.534 2 0.18639588633869097 0.0004893964110929853 0.00130643026880349 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 71470 18254 LYVVDLKKF True PC9_epitope_Rep1 1123.6641319613097 1123.66249490379 75.003 3 0.1863950961547878 0.0004893964110929853 0.0013064540635261894 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 37869 20909 GYPLWKVTF True PC9_epitope_Rep2 1109.59096702105 1109.5898699358602 85.872 2 0.18639421127910305 0.0004893964110929853 0.0013064807102079593 ['ENSG00000198805|ENST00000361505|PNP'] 85283 7948 QEQPVVNAV True H1975_Epitope_Rep2 982.5083595958998 982.50726993586 35.521 2 0.18639099714253007 0.0004893964110929853 0.0013065775036127873 ['ENSG00000119689|ENST00000334220|DLST', 'nc|ENSG00000119689|P36957-2|DLST'] 95678 16288 RYFENPQVI True PC9_epitope_Rep1 1164.5927579262 1164.5916699358602 67.47 2 0.1863895406988263 0.0004893964110929853 0.0013066213666375367 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 74465 10753 NEVTDYAIA True H1975_Epitope_Rep1 994.46074069714 994.4596499358599 46.323 2 0.18637595557014602 0.0004893964110929853 0.0013070305746249605 ['ENSG00000076003|ENST00000264156|MCM6'] 134112 18368 VYKVVGNLL True PC9_epitope_Rep1 1003.6066170851898 1003.60552993586 75.443 2 0.1863751923592697 0.0004893964110929853 0.0013070535676909648 ['ENSG00000183856|ENST00000361170|IQGAP3'] 134545 10309 VYRQDCETF True PC9_epitope_Rep5 1159.4968089360298 1159.49570993586 44.641 2 0.1863741845488857 0.0004893964110929853 0.0013070839303672946 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1'] 142530 21490 YYITGNLETF True PC9_epitope_Rep5 1219.57610480255 1219.5750099358602 87.695 2 0.18636672973937965 0.0004893964110929853 0.001307308546131109 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 47120 14468 ITVEKIIKI True PC9_epitope_Rep4 1055.69543208959 1055.6943299358602 63.562 2 0.18636397254053724 0.0004893964110929853 0.0013073916312042824 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 35814 10640 GTITTFEHA True PC9_epitope_Rep3 975.4661604307499 975.46506993586 45.875 2 0.18636029738184 0.0004893964110929853 0.00130750238619118 ['ENSG00000167658|ENST00000309311|EEF2'] 95145 6220 RVFSWSQAK True NCI_RA007_Epitope_Rep3 1107.58252759567 1107.5814299358601 31.472 2 0.18635600205028913 0.0004893964110929853 0.0013076318426956275 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 98008 12013 SEQEHFLIV True H1975_Epitope_Rep3 1100.5502244078798 1100.54912993586 51.368 2 0.18635312667453965 0.0004893964110929853 0.001307718510494709 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 78451 19477 NYLVLPNRI True PC9_epitope_Rep3 1100.63422881536 1100.63312993586 80.148 2 0.186329698427874 0.0004893964110929853 0.0013084248848613754 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 27209 5256 FLNAENAQK True NCI_RA007_Epitope_Rep2 1033.5192586327698 1033.5181699358602 25.065 2 0.18632696560935252 0.0004893964110929853 0.001308507305730636 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000552481.2_1_12:77377861-77378056:-|nuORF', 'ENST00000448394.2_1_22:20110177-20114572:+|nuORF'] 39723 8643 HLVDEPQNLIK True NCI_RA007_Epitope_Rep1 1304.7088503076 1304.7077499358602 37.621 2 0.18632388143314849 0.0004893964110929853 0.0013086003296784259 ['CON__P02769'] 87868 17846 QRIDEFEAL True PC9_epitope_Rep3 1119.5560380643099 1119.5549499358601 73.84 2 0.18632311086196393 0.0004893964110929853 0.0013086235724379834 ['ENSG00000092820|ENST00000367075|EZR'] 66876 18034 LSNIFVIGK True PC9_epitope_Rep2 989.5909670210499 989.58986993586 74.673 2 0.18631935435361355 0.0004893964110929853 0.0013087368860276543 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 138366 15424 YHGAEIVSL True PC9_epitope_Rep3 987.50254593947 987.50144993586 64.483 2 0.18631798918592507 0.0004893964110929853 0.0013087780682081004 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 114610 8812 TQDPTVTRL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 38.84 2 0.18631779421671354 0.0004893964110929853 0.0013087839498313178 ['ENSG00000130827|ENST00000369682|PLXNA3'] 76504 16698 NQIKEFIYA True PC9_epitope_Rep1 1124.5866099165999 1124.58550993586 69.057 2 0.1863136227170376 0.0004893964110929853 0.001308909797532546 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 65127 9524 LQNEPLPERL True NCI_RA007_Epitope_Rep5 1207.6560864587498 1207.6549899358602 43.27 2 0.18630918453678788 0.0004893964110929853 0.0013090437038933847 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 106752 20974 STYKFFEVI True PC9_epitope_Rep5 1132.580461907 1132.57936993586 85.736 2 0.18630400406860292 0.0004893964110929853 0.0013092000235320315 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 133598 11618 VYAALQRQLL True NCI_RA007_Epitope_Rep4 1173.6869926642098 1173.6858899358601 51.642 2 0.18629480218516406 0.0004893964110929853 0.0013094777347490655 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 105231 20584 SRILVLTEL True PC9_epitope_Rep1 1042.63864548946 1042.63754993586 83.991 2 0.1862885681773615 0.0004893964110929853 0.0013096659095576477 ['ENSG00000148331|ENST00000277458|ASB6', 'ASB6|p.Q233Rfs*2|1|0.18|ENSG00000148331|chr9:129638359-129638359|G/-|frameshift_variant', 'nc|ENSG00000148331|Q9NWX5-2|ASB6'] 72655 4404 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 22.049 2 0.1862875933727758 0.0004893964110929853 0.0013096953366853548 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 108127 22486 SYDPLRIYLF True PC9_epitope_Rep5 1285.6706738937298 1285.6695699358602 91.494 2 0.18628476979473083 0.0004893964110929853 0.0013097805778087856 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000480929.1_1_2:219612227-219612548:+|nuORF'] 130214 6363 VSESSDVLPK True NCI_RA007_Epitope_Rep1 1059.54480467427 1059.54370993586 28.777 2 0.18628457830791678 0.0004893964110929853 0.001309786358814113 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 54798 16167 KYPDIISRI True PC9_epitope_Rep1 1103.63389446219 1103.63278993586 67.0 2 0.18628015204376014 0.0004893964110929853 0.0013099199952837897 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 95838 11241 RYISQPPLL True NCI_RA007_Epitope_Rep4 1085.6233297784897 1085.62222993586 50.131 2 0.18627917942060557 0.0004893964110929853 0.0013099493622685506 ['nc|ENSG00000116406|Q9BZQ6-2|EDEM3', 'ENSG00000116406|ENST00000318130|EDEM3'] 4463 13361 AIVDKVPSV True PC9_epitope_Rep3 926.54368247546 926.54258993586 56.426 2 0.1862789324232021 0.0004893964110929853 0.0013099568201119657 ['ENSG00000181789|ENST00000314797|COPG1'] 6975 19763 AQLELISRL True PC9_epitope_Rep1 1041.61824439805 1041.6171499358602 80.844 2 0.1862768752241624 0.0004893964110929853 0.0013100189368650933 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 96089 13222 RYLVISEKL True PC9_epitope_Rep2 1119.66519459047 1119.6640899358601 56.135 2 0.18627475045933192 0.0004893964110929853 0.0013100830968548142 ['ENSG00000116212|ENST00000371370|LRRC42'] 129265 14135 VQVGETFKV True PC9_epitope_Rep1 1005.5494961318899 1005.54838993586 59.196 2 0.18626867869919697 0.0004893964110929853 0.001310266458775028 ['SMAD4|p.L540Pfs*10|1|0.09|ENSG00000141646|chr18:51078424-51078430|TACTTCA/-|frameshift_variant', 'ENSG00000141646|ENST00000342988|SMAD4'] 9325 2602 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 14.728 2 0.18626559311620958 0.0004893964110929853 0.0013103596505790527 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 56627 15194 LDIDSPPITAR True PC9_epitope_Rep1 1196.6401020414398 1196.63900993586 63.265 2 0.1862638201594303 0.0004893964110929853 0.0013104132010153223 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 118183 14938 TYITSVSRL True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 62.592 2 0.18625401443897704 0.0004893964110929853 0.0013107094128924567 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 23085 18082 EVIKELAQI True PC9_epitope_Rep3 1041.6070110080097 1041.6059099358602 74.75 2 0.18622993725955558 0.0004893964110929853 0.0013114370227559446 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 134732 8725 VYTSGVYHI True NCI_RA007_Epitope_Rep3 1037.51819600361 1037.5170899358602 41.408 2 0.18622276023743142 0.0004893964110929853 0.001311653989945228 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 21492 20547 ERLLGNFSL True PC9_epitope_Rep3 1047.57129420563 1047.57018993586 84.298 2 0.18621085238725937 0.0004893964110929853 0.0013120140532775853 ['ENSG00000151012|ENST00000280612|SLC7A11'] 26702 7823 FIVGADNVGSK True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 35.07 2 0.1862102715157993 0.0004893964110929853 0.0013120316198986513 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 91553 15050 RIIDVVYNA True PC9_epitope_Rep4 1061.58694426977 1061.58584993586 65.822 2 0.18620341221182016 0.0004893964110929853 0.0013122390756954724 ['ENSG00000142937|ENST00000396651|RPS8'] 59777 9964 LGEHNIDVLE True NCI_RA007_Epitope_Rep4 1137.56660274801 1137.56550993586 45.171 2 0.18620030002577326 0.0004893964110929853 0.0013123332128586406 ['CON__P00761'] 54660 14702 KYLSGIAHF True PC9_epitope_Rep1 1034.5549158654999 1034.55380993586 61.371 2 0.18619129195328585 0.0004893964110929853 0.0013126057264958991 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 115573 7208 TRSTFSTNY True PC9_epitope_Rep2 1075.49343780775 1075.4923499358601 33.115 2 0.18618805663760377 0.0004893964110929853 0.0013127036156239391 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 107577 14495 SVPIDLQKV True PC9_epitope_Rep2 997.58079626017 997.57968993586 61.024 2 0.18618192044089854 0.0004893964110929853 0.0013128892951808253 ['ENSG00000198056|ENST00000338193|PRIM1'] 108659 12206 SYQGKGFVM True PC9_epitope_Rep1 1015.4797023199098 1015.47860993586 51.808 2 0.18617267886887245 0.0004893964110929853 0.0013131689921930063 ['ENSG00000130202|ENST00000252483|NECTIN2'] 41069 6231 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60802993586 28.946 2 0.1861652470022043 0.0004893964110929853 0.001313393961640008 ['CON__P12763'] 95875 20898 RYLDEINLL True PC9_epitope_Rep3 1147.62372370131 1147.62262993586 85.659 2 0.18615963179366085 0.0004893964110929853 0.0013135639647957956 ['ENSG00000060558|ENST00000262958|GNA15'] 85823 14983 QHEEFVTSL True PC9_epitope_Rep3 1088.51383889916 1088.51274993586 62.76 2 0.18615344197556458 0.0004893964110929853 0.001313751390093725 ['ENSG00000085872|ENST00000546361|CHERP'] 141311 12582 YTDSSSILNY True H1975_Epitope_Rep1 1161.51898384925 1161.51788993586 53.445 2 0.18614857845729985 0.0004893964110929853 0.0013138986743524682 ['ENSG00000111647|ENST00000279907|BLTP3B'] 21535 8863 ERM[Oxidation]PEQIRL True PC9_epitope_Rep5 1186.6128421282199 1186.61119490379 39.035 3 0.1861435627854282 0.0004893964110929853 0.0013140505836889416 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 26357 11220 FHSGGYGQDAL True PC9_epitope_Rep1 1150.50433684462 1150.5032299358602 48.038 2 0.1861315017394016 0.0004893964110929853 0.001314415947901707 ['ENSG00000168036|ENST00000349496|CTNNB1'] 77521 12582 NTDGFLLPKY True H1975_Epitope_Rep3 1166.5971746003 1166.5960699358602 53.6 2 0.18613093864723285 0.0004893964110929853 0.0013144330080914644 ['ENST00000536234.1_1_11:63991488-63991698:-|nuORF', 'ENST00000541928.1_1_11:63991350-63991698:-|nuORF', 'nc|ENSG00000149743|Q86TN4-2|TRPT1', 'ENSG00000149743|ENST00000317459|TRPT1', 'nc|ENSG00000149743|Q86TN4-4|TRPT1'] 88047 12439 QRQDIAFAY True PC9_epitope_Rep6 1110.5458077337798 1110.54470993586 59.274 2 0.18612962097706848 0.0004893964110929853 0.0013144729308478898 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 8293 14248 ATIIDILTK True NCI_RA007_Epitope_Rep3 986.60119735158 986.6006449679301 63.356 1 0.18611712920212092 0.0004893964110929853 0.0013148514668984805 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 89051 19124 QVLPHLLEV True PC9_epitope_Rep4 1046.6124307416198 1046.61132993586 81.653 2 0.18611387586208547 0.0004893964110929853 0.0013149500702213709 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 21946 10422 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4824749679299 45.101 1 0.18610996600087176 0.0004893964110929853 0.0013150685814158397 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 17721 11286 EHQAVLQSL True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 48.736 2 0.18610740379653593 0.0004893964110929853 0.001315146249799662 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 6830 12184 AQFEHTILL True NCI_RA007_Epitope_Rep5 1070.5760452329 1070.57494993586 53.519 2 0.18609903530134292 0.0004893964110929853 0.0013153999569582406 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 96326 13528 RYSPVLSRF True PC9_epitope_Rep5 1123.61382772395 1123.61218490379 57.057 3 0.18609363107510435 0.0004893964110929853 0.0013155638226269738 ['COG1|p.A940Gfs*7|1|0.42|ENSG00000166685|chr17:73208324-73208325|-/G|frameshift_variant', 'ENSG00000166685|ENST00000299886|COG1'] 141333 8727 YTDSYTDTY True H1975_Epitope_Rep3 1127.42950013851 1127.42897496793 38.571 1 0.18609291203062628 0.0004893964110929853 0.0013155856268658314 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 96630 6785 SAIDTREEL True NCI_RA007_Epitope_Rep3 1032.50875351872 1032.5076499358602 33.793 2 0.18609022526274996 0.0004893964110929853 0.0013156671033744986 ['nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170'] 64533 13505 LPRPQGITV True PC9_epitope_Rep5 979.5814649665099 979.58036993586 56.967 2 0.18608910807170903 0.0004893964110929853 0.0013157009837951588 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 74843 13768 NHFMDNTTL True PC9_epitope_Rep5 1091.47059418819 1091.46948993586 57.98 2 0.18608864296698235 0.0004893964110929853 0.0013157150890209205 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 115762 6777 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 31.022 2 0.1860757318200551 0.0004893964110929853 0.0013161067057423374 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 89426 13856 QYDPYTDSRF True PC9_epitope_Rep2 1290.55168095986 1290.5505899358602 58.581 2 0.1860728423249846 0.0004893964110929853 0.0013161943649696094 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 38593 14142 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.54364993586 59.569 2 0.18606608600006228 0.0004893964110929853 0.0013163993558801155 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 42639 3268 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 17.259 2 0.18606541230862916 0.0004893964110929853 0.0013164197978328916 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 115360 19210 TRIWQDVQL True PC9_epitope_Rep2 1157.6193070272097 1157.61820993586 79.264 2 0.18605522859535323 0.0004893964110929853 0.0013167288430279785 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 48366 19454 IYTFPHSAF True PC9_epitope_Rep3 1081.5232813840498 1081.52218993586 80.057 2 0.18605418045749264 0.0004893964110929853 0.0013167606550002129 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 95362 15683 RVVDYLTKL True PC9_epitope_Rep4 1105.64954452633 1105.64844993586 68.252 2 0.1860497768719594 0.0004893964110929853 0.001316894316391002 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 42447 7165 IEDVQKLAA True H1975_Epitope_Rep3 985.5444107514498 985.54330993586 32.534 2 0.18604730210366818 0.0004893964110929853 0.0013169694386421054 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 26400 16597 FHYEADGANVL True PC9_epitope_Rep3 1234.5618517207397 1234.56074993586 68.978 2 0.18604611277294117 0.0004893964110929853 0.0013170055426216154 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 70803 16851 LYAPYSTHF True PC9_epitope_Rep3 1097.51819600361 1097.5170899358602 69.97 2 0.18604019663893268 0.0004893964110929853 0.0013171851507919055 ['ENSG00000013588|ENST00000014914|GPRC5A'] 137325 10048 YDGIILPGK True NCI_RA007_Epitope_Rep5 974.54368247546 974.54258993586 45.289 2 0.18603929489326398 0.0004893964110929853 0.0013172125290843624 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 40494 13663 HRDSGILGL True PC9_epitope_Rep1 966.5246783663799 966.52358993586 57.41 2 0.18603799143859348 0.0004893964110929853 0.0013172521048467841 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 99488 7753 SIDDLEEK True PC9_epitope_Rep1 947.44475627983 947.44364993586 34.643 2 0.18603765763870506 0.0004893964110929853 0.001317262239940284 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 108736 17498 SYRQVAFDF True PC9_epitope_Rep4 1131.5349086969097 1131.53380993586 75.307 2 0.18603606911569423 0.0004893964110929853 0.0013173104729905516 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 142428 19504 YYFDSYAHF True PC9_epitope_Rep4 1211.4923751785898 1211.4912699358601 83.141 2 0.18602244805887816 0.0004893964110929853 0.001317724128045426 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.T357Pfs*4|1|0.34|ENSG00000111218|chr12:3592317-3592317|G/-|frameshift_variant', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF'] 77932 5996 NVKVDPEIQ True NCI_RA007_Epitope_Rep3 1040.5502244078798 1040.54912993586 30.563 2 0.18601857874350208 0.0004893964110929853 0.001317841658229021 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 78537 13464 NYPQSVPRL True PC9_epitope_Rep5 1072.56654317836 1072.5654499358602 56.807 2 0.18601552547820202 0.0004893964110929853 0.0013179344083661835 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 111143 20744 THFLQPIYL True PC9_epitope_Rep3 1130.6124307416198 1130.61132993586 85.059 2 0.18601399583038938 0.0004893964110929853 0.0013179808774877295 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 73259 5132 MSEEHTAVY True H1975_Epitope_Rep3 1065.44371073401 1065.4426099358602 24.844 2 0.18600989712466642 0.0004893964110929853 0.0013181054000333625 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 115087 14367 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61278993586 63.171 2 0.18600416970128908 0.0004893964110929853 0.0013182794243117605 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 78453 19415 NYLVLPNRI True PC9_epitope_Rep5 1100.63422881536 1100.63312993586 79.728 2 0.186000196432542 0.0004893964110929853 0.001318400163198398 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 53375 13846 KQTDVLQQL True PC9_epitope_Rep1 1071.59242357303 1071.5913299358601 58.1 2 0.1859911382444766 0.0004893964110929853 0.00131867546302834 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54351 18865 KYEELFPAF True PC9_epitope_Rep6 1142.5648118428596 1142.56370993586 85.213 2 0.1859529575816951 0.0004893964110929853 0.0013198364974644728 ['ENSG00000105402|ENST00000263354|NAPA'] 54043 11117 KVIDPATATSV True PC9_epitope_Rep3 1100.607739284 1100.60664993586 47.759 2 0.18595289077414928 0.0004893964110929853 0.0013198385299106033 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 20652 16745 EQAAWYHTL True PC9_epitope_Rep5 1117.51925863277 1117.5181699358602 69.416 2 0.18594802601529645 0.0004893964110929853 0.0013199865360008336 ['ENSG00000170915|ENST00000442253|PAQR8'] 71261 21068 LYPQFMFHL True PC9_epitope_Rep4 1194.5895871220598 1194.58848993586 89.197 2 0.18594175925123346 0.0004893964110929853 0.0013201772214106976 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 28018 19511 FQNPFRSEL True PC9_epitope_Rep3 1136.56145779792 1136.56036993586 80.28 2 0.18593280303875803 0.0004893964110929853 0.0013204497894236684 ['ENSG00000073050|ENST00000262887|XRCC1'] 38608 8243 HFC[Carbamidomethyl]GGSLINSQ True NCI_RA007_Epitope_Rep2 1218.54515639021 1218.5440499358601 36.7 2 0.18592732068498222 0.0004893964110929853 0.0013206166639324144 ['CON__P00761'] 105743 7330 SSFSGLLRK True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 34.834 2 0.18592405432781506 0.0004893964110929853 0.0013207160969249902 ['ENSG00000162783|ENST00000367577|IER5'] 115289 11789 TRFEVQSAV True PC9_epitope_Rep1 1035.5349086969097 1035.53380993586 50.217 2 0.18592131373590884 0.0004893964110929853 0.0013207995305951656 ['ENSG00000166016|ENST00000435224|ABTB2'] 70307 12400 LVSESSDILPK True PC9_epitope_Rep1 1186.6445187155398 1186.64342993586 52.557 2 0.18591463650974877 0.0004893964110929853 0.0013210028319704927 ['CON__H-INV:HIT000292931'] 111404 7656 THSLETQEL True PC9_epitope_Rep4 1056.5087535187201 1056.5076499358602 36.831 2 0.18591433748785383 0.0004893964110929853 0.0013210119370181189 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 41452 15579 HYKPTPLYF True PC9_epitope_Rep1 1164.59678067748 1164.59568993586 64.747 2 0.18591401703331722 0.0004893964110929853 0.0013210216947473958 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 35989 3867 GTVRIGVAK True NCI_RA007_Epitope_Rep4 899.5552502186698 899.55414993586 21.079 2 0.18591145372293946 0.0004893964110929853 0.001321099749258042 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13136054-13190160:-|nuORF'] 61055 20568 LIGEFLEKV True PC9_epitope_Rep3 1046.60119735158 1046.60010993586 84.38 2 0.18590761621968294 0.0004893964110929853 0.0013212166124331936 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 31759 6690 GEHSYTGIIHA True H1975_Epitope_Rep2 1183.56218607391 1183.56055490379 30.643 3 0.1859059925585449 0.0004893964110929853 0.0013212660607737246 ['ENSG00000122912|ENST00000609923|SLC25A16'] 6924 15092 AQIKELEEL True PC9_epitope_Rep2 1071.58119018299 1071.58008993586 63.309 2 0.18590475966401473 0.0004893964110929853 0.0013213036096188 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'NUMA1|p.E1073K|1|0.19|ENSG00000137497|chr11:72014286-72014286|C/T|missense_variant'] 77352 6044 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 28.226 2 0.18590314492142815 0.0004893964110929853 0.0013213527895871257 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 95874 20544 RYLDEINLL True PC9_epitope_Rep2 1147.62372370131 1147.62262993586 84.455 2 0.1858937474363644 0.0004893964110929853 0.001321639043770776 ['ENSG00000060558|ENST00000262958|GNA15'] 54103 14650 KVLNELTQL True PC9_epitope_Rep6 1056.6179100448799 1056.6168099358601 68.272 2 0.1858926900958552 0.0004893964110929853 0.001321671255016787 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 29304 16558 FVDDYTVRV True PC9_epitope_Rep1 1112.55022440788 1112.54912993586 68.513 2 0.18588869083671694 0.0004893964110929853 0.0013217930971713618 ['ENSG00000115233|ENST00000409682|PSMD14'] 107732 5391 SVSGYIYHK True NCI_RA007_Epitope_Rep4 1052.52909504048 1052.5279899358602 27.305 2 0.18588659599647334 0.0004893964110929853 0.0013218569234478203 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 17640 14145 EHISSLIKL True PC9_epitope_Rep4 1038.6073453611798 1038.6062499358602 62.312 2 0.18588369948956276 0.0004893964110929853 0.0013219451802551627 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 53218 12992 KQFEGTVEI True PC9_epitope_Rep5 1049.53932537101 1049.53822993586 54.983 2 0.1858816734141966 0.0004893964110929853 0.001322006918451645 ['ENSG00000139618|ENST00000380152|BRCA2'] 138857 13102 YKDGTELEL True PC9_epitope_Rep2 1066.51825557326 1066.51714993586 55.673 2 0.18587819954490709 0.0004893964110929853 0.0013221127802849851 ['ENSG00000143815|ENST00000272163|LBR'] 54822 17060 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 70.49 2 0.18587493785942644 0.0004893964110929853 0.0013222121838162286 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 134080 19052 VYKPVSIYL True PC9_epitope_Rep1 1080.6219327961599 1080.62082993586 78.074 2 0.18586802297023927 0.0004893964110929853 0.0013224229476147336 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 74761 15908 NHASLISAL True PC9_epitope_Rep5 924.50288029264 924.50178993586 66.183 2 0.1858523598085915 0.0004893964110929853 0.0013229004807438778 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 72481 5819 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 27.455 2 0.18584572088326473 0.0004893964110929853 0.0013231029381908167 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 107034 4805 SVFQTTDTK True NCI_RA007_Epitope_Rep3 1025.5029398622898 1025.50184993586 25.866 2 0.18583486284078898 0.0004893964110929853 0.0013234341267285613 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 96115 14133 RYNESLTNF True PC9_epitope_Rep1 1142.5356369729 1142.53452993586 59.188 2 0.1858346707509823 0.0004893964110929853 0.001323439986538396 ['ENSG00000113300|ENST00000261951|CNOT6'] 77636 8326 NTFSVVPSPK True H1975_Epitope_Rep1 1074.5709598524597 1074.5698699358602 36.959 2 0.18582054738797596 0.0004893964110929853 0.0013238708990977847 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 75666 9051 NLGGGVVTIER True NCI_RA007_Epitope_Rep1 1113.61422164677 1113.6131299358601 39.209 2 0.18581610966836304 0.0004893964110929853 0.0013240063257102537 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 94885 8009 RTDDTPVVL True NCI_RA007_Epitope_Rep3 1014.5345743437399 1014.53346993586 38.599 2 0.18581526030183723 0.0004893964110929853 0.0013240322475501856 ['nc|ENSG00000143622|Q92963-2|RIT1', 'ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1'] 103106 16428 SPHGLVMVGV True PC9_epitope_Rep1 994.5269868654999 994.52588993586 68.013 2 0.18581052990428518 0.0004893964110929853 0.0013241766239874178 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 121970 14699 VFTPVVQRI True PC9_epitope_Rep4 1057.6284151589298 1057.62730993586 64.475 2 0.18580941529057887 0.0004893964110929853 0.0013242106454033789 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 95102 15167 RVAQLEQVYI True PC9_epitope_Rep6 1217.6768219033297 1217.67572993586 70.415 2 0.18580142321976678 0.0004893964110929853 0.001324454613490446 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 93330 13188 RPTEVLAGTQL True PC9_epitope_Rep2 1183.6560864587498 1183.6549899358602 56.003 2 0.18579573383713482 0.0004893964110929853 0.0013246283165568719 ['ENSG00000101255|ENST00000217233|TRIB3'] 137503 6360 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52897496793 29.525 1 0.18579542648307373 0.0004893964110929853 0.0013246377010622135 ['ENSG00000127184|ENST00000247655|COX7C'] 131110 12218 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.52277496793 52.079 1 0.18579315093863014 0.0004893964110929853 0.0013247071828063378 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 1631 13534 AEFQSIPRVF True NCI_RA007_Epitope_Rep4 1192.6240580544797 1192.62296993586 59.266 2 0.1857922453115693 0.0004893964110929853 0.0013247348363467975 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 42264 18950 IDTIEIITDR True PC9_epitope_Rep1 1187.63976768827 1187.6386699358602 77.674 2 0.1857859146426907 0.0004893964110929853 0.0013249281610074532 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 65063 19856 LQLDKEFQL True PC9_epitope_Rep2 1132.61282466444 1132.61172993586 81.768 2 0.1857821367359559 0.0004893964110929853 0.001325043543418095 ['ENSG00000068438|ENST00000348411|FTSJ1', 'nc|ENSG00000068438|Q9UET6-2|FTSJ1', 'ENST00000487353.5_1_X:48336396-48336561:+|nuORF'] 139250 10332 YLHSQVVSV True PC9_epitope_Rep4 1030.5447451046198 1030.54364993586 47.434 2 0.1857801977791487 0.0004893964110929853 0.0013251027657077549 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 3516 9908 AGLQFPVGR True H1975_Epitope_Rep3 943.5239500903898 943.52284993586 43.142 2 0.18577816109396247 0.0004893964110929853 0.0013251649758094352 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 130215 6324 VSESSDVLPK True NCI_RA007_Epitope_Rep2 1059.54480467427 1059.54370993586 29.206 2 0.1857755983779484 0.0004893964110929853 0.0013252432575667232 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 25807 12190 FEYILSHVA True H1975_Epitope_Rep3 1077.5494961318898 1077.54838993586 52.06 2 0.1857689721733797 0.0004893964110929853 0.0013254456857733153 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8'] 108831 18212 SYVQVTSNF True PC9_epitope_Rep5 1043.49237517859 1043.4912699358601 75.064 2 0.18576472156159285 0.0004893964110929853 0.001325575556778726 ['ENSG00000072364|ENST00000265343|AFF4'] 34704 6847 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 33.557 2 0.1857634647233991 0.0004893964110929853 0.0013256139600095885 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 68263 5330 LTEAPLNPK True NCI_RA007_Epitope_Rep5 981.5494961318899 981.54838993586 27.195 2 0.18575465611783248 0.0004893964110929853 0.0013258831420366883 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 40469 5967 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 28.34 2 0.18574544244522484 0.0004893964110929853 0.0013261647611302171 ['ENSG00000127948|ENST00000461988|POR'] 97650 9222 SEGFAVIKEA True H1975_Epitope_Rep2 1049.53932537101 1049.53822993586 40.426 2 0.18573338529975764 0.0004893964110929853 0.0013265333825303453 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 104933 11268 SRDDTTLNAL True PC9_epitope_Rep5 1104.54111627616 1104.54000993586 48.335 2 0.18573088204547183 0.0004893964110929853 0.0013266099270435438 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 96181 12163 RYPDSHQLF True PC9_epitope_Rep1 1161.55670677065 1161.55560993586 51.649 2 0.18573072330711748 0.0004893964110929853 0.00132661478109445 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 89113 4936 QVQAAQFAK True NCI_RA007_Epitope_Rep4 989.5294293936498 989.52832993586 25.448 2 0.18573045352225964 0.0004893964110929853 0.0013266230308707735 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 23869 21633 EYIQFVPLL True PC9_epitope_Rep6 1120.6168474157198 1120.61574993586 96.096 2 0.18572572478662244 0.0004893964110929853 0.0013267676396693227 ['ENSG00000179409|ENST00000319004|GEMIN4'] 99105 8381 SHHENLVSF True PC9_epitope_Rep6 1068.49885754136 1068.49776993586 41.901 2 0.1857215637911399 0.0004893964110929853 0.0013268948995553123 ['ENSG00000128791|ENST00000262120|TWSG1'] 32643 10407 GGNFGFGDSR True PC9_epitope_Rep3 1012.4362572847999 1012.43516993586 44.97 2 0.18571552862066285 0.0004893964110929853 0.0013270795009533208 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 142459 19079 YYFPVKNVI True PC9_epitope_Rep4 1141.6171817688898 1141.6160899358601 81.478 2 0.18571413287589503 0.0004893964110929853 0.0013271221971052375 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 101172 7241 SLGTADVHFER True NCI_RA007_Epitope_Rep5 1230.59929985862 1230.59764490379 34.529 3 0.1857029991182434 0.0004893964110929853 0.0013274628306048336 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 113723 12272 TLYVGNLSR True PC9_epitope_Rep3 1021.5556441414899 1021.55454993586 52.231 2 0.18568965244391653 0.0004893964110929853 0.0013278712830340207 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 76674 15695 NQSEKIFSL True PC9_epitope_Rep2 1064.55022440788 1064.54912993586 65.647 2 0.18567977669137364 0.0004893964110929853 0.0013281735948578316 ['ENSG00000130818|ENST00000253115|ZNF426'] 141206 9070 YTADGKEVLEY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 39.792 2 0.18566674803115185 0.0004893964110929853 0.0013285725275356706 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 49097 5358 KEIESIVKA True H1975_Epitope_Rep3 1015.5913609438699 1015.59026993586 25.674 2 0.18566580021831255 0.0004893964110929853 0.0013286015538948248 ['ENSG00000100209|ENST00000216027|HSCB'] 31926 5313 GEMMVEQRAA True NCI_RA007_Epitope_Rep3 1120.50051441748 1120.49940993586 27.909 2 0.1856632281771809 0.0004893964110929853 0.0013286803247475716 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'ENST00000569319.5_1_16:70399881-70405886:+|nuORF', 'ENST00000562140.2_1_16:70398455-70404584:+|nuORF'] 97394 9306 SEDSRFITV True H1975_Epitope_Rep2 1052.51383889916 1052.51274993586 40.753 2 0.18565476325849908 0.0004893964110929853 0.0013289396028292229 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'PTPRG|p.F707L|1|0.16|ENSG00000144724|chr3:62203914-62203914|T/C|missense_variant'] 84420 8894 QADTTRLEL True NCI_RA007_Epitope_Rep1 1045.54038800017 1045.53928993586 38.597 2 0.1856503447681821 0.0004893964110929853 0.0013290749600915334 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 11820 16676 DHFNAMTSL True PC9_epitope_Rep5 1034.4491304676199 1034.4480299358602 69.147 2 0.185643841336052 0.0004893964110929853 0.001329274213181849 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 35966 15642 GTVEIFPIFK True NCI_RA007_Epitope_Rep4 1149.6433965167298 1149.6422899358602 67.944 2 0.1856290897581066 0.0004893964110929853 0.001329726285148744 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 60902 13487 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 56.897 2 0.18562495296857667 0.0004893964110929853 0.0013298530874956578 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 88819 5791 QTYVGITEK True NCI_RA007_Epitope_Rep3 1037.5393253710097 1037.53822993586 29.756 2 0.18562369485915045 0.0004893964110929853 0.001329891653917767 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 71316 23032 LYQFNPAFF True PC9_epitope_Rep1 1145.5545815123298 1145.5534899358602 93.392 2 0.18561586682996561 0.0004893964110929853 0.0013301316416041778 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 6395 5024 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 26.948 2 0.18561356460525022 0.0004893964110929853 0.0013302022302842398 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 28183 20575 FRDYFPIQL True PC9_epitope_Rep4 1197.6182443980497 1197.6171499358602 87.295 2 0.18561322672235867 0.0004893964110929853 0.0013302125904522308 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 97588 7924 SEETPLTAA True H1975_Epitope_Rep2 917.4341915961298 917.43308993586 35.425 2 0.18561000700446675 0.0004893964110929853 0.001330311317526283 ['ENSG00000182154|ENST00000371443|MRPL41'] 21500 15134 ERLQIDEQL True PC9_epitope_Rep5 1142.5931518490197 1142.5920499358601 63.218 2 0.1856096784546841 0.0004893964110929853 0.00133032139234945 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 54884 17729 KYPKVWEGF True PC9_epitope_Rep1 1152.59678067748 1152.59568993586 72.992 2 0.18559675761996708 0.0004893964110929853 0.0013307176642676497 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 42646 3793 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 19.676 2 0.18559411085567884 0.0004893964110929853 0.0013307988530632062 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 74776 19322 NHDFTPLEI True PC9_epitope_Rep5 1084.5189242796 1084.5178299358602 79.366 2 0.1855887017817796 0.0004893964110929853 0.0013309647904193593 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 116490 5161 TTNDIVISK True NCI_RA007_Epitope_Rep5 989.53932537101 989.53822993586 26.547 2 0.18558789683323326 0.0004893964110929853 0.0013309894860743612 ['ENSG00000113141|ENST00000417647|IK'] 118042 14772 TYFDKNYNL True PC9_epitope_Rep4 1176.5451390274397 1176.5440499358601 64.753 2 0.18558562332810646 0.0004893964110929853 0.00133105923922239 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 133700 17791 VYAVIPAEKF True PC9_epitope_Rep2 1135.62774645259 1135.62664993586 73.724 2 0.18558413298684537 0.0004893964110929853 0.0013311049661986747 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 45420 20623 IQHDLIFSL True PC9_epitope_Rep2 1084.5916952970401 1084.5905899358602 84.76 2 0.18558198601231476 0.0004893964110929853 0.0013311708429086112 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 137167 9386 YAYDGKDYL True NCI_RA007_Epitope_Rep3 1106.4920408254197 1106.49094993586 44.009 2 0.18557266547349358 0.0004893964110929853 0.0013314568676262208 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 133785 18211 VYEYVVERF True PC9_epitope_Rep2 1202.5971746002995 1202.5960699358602 75.363 2 0.18556910937934679 0.0004893964110929853 0.0013315660117608212 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 4034 8939 AHFQKSYTL True PC9_epitope_Rep1 1093.5556441414901 1093.5545499358602 39.225 2 0.18556734433424676 0.0004893964110929853 0.0013316201881000875 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 91052 21216 RFLDDLGLKF True PC9_epitope_Rep5 1222.6710082468996 1222.66990993586 86.655 2 0.18556406336816966 0.0004893964110929853 0.0013317209000273575 ['ENSG00000046604|ENST00000261590|DSG2'] 11717 14732 DHARLQLQL True PC9_epitope_Rep5 1092.60399131624 1092.60288993586 61.665 2 0.18555629778376379 0.0004893964110929853 0.0013319593013914092 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 24789 5544 FATHAAALSVR True NCI_RA007_Epitope_Rep3 1142.6196413803798 1142.61799490379 28.803 3 0.18555070603016488 0.0004893964110929853 0.0013321309932236294 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 35629 12985 GTDELRLLY True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 55.181 2 0.1855266863927187 0.0004893964110929853 0.0013328687558185962 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 106753 18801 STYKFFEVI True PC9_epitope_Rep6 1132.580461907 1132.57936993586 84.958 2 0.18550395847281545 0.0004893964110929853 0.001333567220453988 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 134730 9581 VYTSGVYHI True NCI_RA007_Epitope_Rep1 1037.51819600361 1037.5170899358602 41.267 2 0.18550363677928694 0.0004893964110929853 0.0013335771092336083 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 108699 13248 SYREDPIVY True PC9_epitope_Rep1 1140.5451390274397 1140.5440499358601 55.824 2 0.1855020465274467 0.0004893964110929853 0.0013336259942622157 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 111087 6880 THDQAVQAL True PC9_epitope_Rep3 981.4879585044899 981.48686993586 31.479 2 0.18549182360538952 0.0004893964110929853 0.001333940294194845 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 110200 6398 TEQGGAHFSV True H1975_Epitope_Rep2 1031.4672230599099 1031.4661299358602 29.535 2 0.18548476416647153 0.0004893964110929853 0.001334157377354313 ['ENSG00000079246|ENST00000392132|XRCC5'] 54393 16183 KYFEKQFEL True PC9_epitope_Rep5 1230.6284747285797 1230.62683490379 67.237 3 0.18547686862142568 0.0004893964110929853 0.00133440021336999 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 135137 12298 WEIENNPTV True H1975_Epitope_Rep1 1100.51383889916 1100.5132749679299 52.331 1 0.18547050500356424 0.0004893964110929853 0.001334595965554658 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 69999 7375 LVLVGDGGTGK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 33.345 2 0.18547046385689905 0.0004893964110929853 0.0013345972313669318 ['ENSG00000132341|ENST00000543796|RAN'] 28747 15675 FSSPHLVQV True PC9_epitope_Rep3 1012.5341804209198 1012.53308993586 65.437 2 0.18546276339868767 0.0004893964110929853 0.0013348341450099288 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 48552 13764 KALSIFNEL True NCI_RA007_Epitope_Rep3 1033.58079626017 1033.5796899358602 61.468 2 0.18546070308279072 0.0004893964110929853 0.0013348975401970859 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 120613 4908 VEHSDLSFSK True NCI_RA007_Epitope_Rep5 1147.5509526838698 1147.54930490379 25.571 3 0.18545642954866637 0.0004893964110929853 0.0013350290449440842 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 125829 18149 VLADALKSI True PC9_epitope_Rep5 928.5593325396001 928.55822993586 74.818 2 0.18544807395930052 0.0004893964110929853 0.0013352861997867223 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 84337 21666 PYTPFLTEL True PC9_epitope_Rep4 1079.55391280599 1079.55280993586 91.533 2 0.18544115402513398 0.0004893964110929853 0.001335499207938128 ['ENSG00000196305|ENST00000443024|IARS1'] 34714 6612 GQDVGRYQV True PC9_epitope_Rep6 1020.49885754136 1020.49776993586 34.145 2 0.1854403968449953 0.0004893964110929853 0.0013355225173863044 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 12749 9085 DLEIATYR True H1975_Epitope_Rep1 979.4974605590301 979.49636993586 39.849 2 0.18543872483156573 0.0004893964110929853 0.0013355739910081942 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 65910 5020 LSDPSGPKSY True H1975_Epitope_Rep3 1049.50293986229 1049.50184993586 24.431 2 0.1854336144007208 0.0004893964110929853 0.0013357313300540838 ['nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 95917 8743 RYLEKPMEI True NCI_RA007_Epitope_Rep2 1177.6165301458898 1177.6154299358602 38.654 2 0.18543318466382522 0.0004893964110929853 0.0013357445615648693 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 26398 15682 FHYEADGANVL True PC9_epitope_Rep2 1234.5618517207397 1234.56074993586 65.597 2 0.1854317988398178 0.0004893964110929853 0.0013357872316965276 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 90522 8652 RELVKNWVP True H1975_Epitope_Rep1 1139.64512785223 1139.64402993586 38.209 2 0.18542902367138284 0.0004893964110929853 0.0013358726844628478 ['ENSG00000127540|ENST00000591899|UQCR11'] 68302 7482 LTEIKGSVY True H1975_Epitope_Rep3 1008.54916177872 1008.54806993586 33.76 2 0.18542751095046558 0.0004893964110929853 0.0013359192663528092 ['ENSG00000153975|ENST00000368576|ZUP1', 'ENST00000471919.1_1_6:116981518-116989864:-|nuORF'] 139624 16297 YM[Oxidation]DDYIFTY True H1975_Epitope_Rep2 1245.48999260053 1245.48888993586 67.906 2 0.1854229183369517 0.0004893964110929853 0.0013360606987247456 ['ENSG00000157483|ENST00000288235|MYO1E'] 62218 9276 LLEVLSQK True H1975_Epitope_Rep3 928.5593325396 928.55822993586 40.674 2 0.18541609734582973 0.0004893964110929853 0.0013362707830623056 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 54940 21850 KYPSPFFVF True PC9_epitope_Rep5 1130.5800679841798 1130.5789699358602 89.08 2 0.18540115035325302 0.0004893964110929853 0.0013367312614255813 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 140708 7306 YSADREDLY True H1975_Epitope_Rep3 1130.48801807414 1130.4869299358602 33.075 2 0.18539900242872623 0.0004893964110929853 0.0013367974465203875 ['ENSG00000174231|ENST00000304992|PRPF8'] 75600 13592 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.5015099358602 57.418 2 0.18539543426525995 0.0004893964110929853 0.0013369074014234056 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 10006 19495 AYQHLFYLL True PC9_epitope_Rep6 1166.6124307416198 1166.61132993586 87.649 2 0.18538139343953874 0.0004893964110929853 0.0013373401651559202 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 134336 6426 VYPDGIRHI True NCI_RA007_Epitope_Rep3 1068.5716285587998 1068.5705299358601 32.291 2 0.1853500774282958 0.0004893964110929853 0.001338305887380251 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 89414 18144 QYASAFHFL True PC9_epitope_Rep6 1082.51853035678 1082.51742993586 82.427 2 0.18534896088214398 0.0004893964110929853 0.0013383403323001624 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 15859 8696 EDFSETLTR True NCI_RA007_Epitope_Rep2 1096.50366813828 1096.50256993586 38.473 2 0.18534545383279216 0.0004893964110929853 0.0013384485288907145 ['ENSG00000044574|ENST00000324460|HSPA5'] 44466 20438 ILLAELEQLK True PC9_epitope_Rep2 1168.7067250492798 1168.70562993586 84.042 2 0.18534400766104972 0.0004893964110929853 0.0013384931475402396 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 90617 5285 REMPVKVEA True NCI_RA007_Epitope_Rep4 1057.5590152697698 1057.5579099358602 26.88 2 0.1853419205925257 0.0004893964110929853 0.0013385575423679652 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 31790 6127 GEIESKFNQA True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 28.546 2 0.18533858983987742 0.0004893964110929853 0.0013386603165057777 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 77291 8765 NSDLSEKLEY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 38.679 2 0.18533785295908192 0.0004893964110929853 0.001338683054864138 ['ENSG00000117724|ENST00000366955|CENPF'] 70783 20383 LYANMFERL True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 83.226 2 0.18533085524685838 0.0004893964110929853 0.0013388990066273458 ['ENSG00000004478|ENST00000001008|FKBP4'] 85250 9098 QEQFNSIAA True H1975_Epitope_Rep2 1006.4719740871798 1006.47147496793 39.946 1 0.18532304691392418 0.0004893964110929853 0.0013391400156408206 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 70327 10829 LVSESSDVLPK True PC9_epitope_Rep2 1172.6288686514001 1172.6277699358602 46.971 2 0.1853224214975856 0.0004893964110929853 0.0013391593213828684 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 22230 8700 ESYSVYVYK True H1975_Epitope_Rep1 1136.5389910178399 1136.5378899358602 38.393 2 0.18531321130100883 0.0004893964110929853 0.0013394436597892697 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 28020 19460 FQNPFRSEL True PC9_epitope_Rep5 1136.56145779792 1136.56036993586 79.906 2 0.18529954350872774 0.0004893964110929853 0.001339865725219279 ['ENSG00000073050|ENST00000262887|XRCC1'] 20740 9841 EQEVNILK True PC9_epitope_Rep3 971.5287606873098 971.52766993586 42.815 2 0.18528991054213215 0.0004893964110929853 0.0013401632741351468 ['ENSG00000100345|ENST00000216181|MYH9'] 7888 4839 ATAGIIGVNRK True NCI_RA007_Epitope_Rep4 1098.65094150866 1098.6498499358602 25.05 2 0.18527581302345061 0.0004893964110929853 0.0013405988462419157 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 7863 6199 ATADLALGR True NCI_RA007_Epitope_Rep3 886.4872302284999 886.48612993586 31.391 2 0.18527454596677723 0.0004893964110929853 0.0013406380015377015 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 1441 10077 AEEFVIVKA True H1975_Epitope_Rep3 1004.5542471591598 1004.55314993586 43.8 2 0.1852708028945868 0.0004893964110929853 0.0013407536787486691 ['ENSG00000196455|ENST00000356763|PIK3R4'] 92375 18872 RLPETLPSL True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 77.61 2 0.18526737797235304 0.0004893964110929853 0.001340859532507577 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 49355 11931 KESEVFYELA True H1975_Epitope_Rep2 1213.58666948625 1213.5855699358601 50.971 2 0.18526574544001526 0.0004893964110929853 0.0013409099919836742 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion', 'HIF1A|p.P45Hfs*6|1|0.31|ENSG00000100644|chr14:61720479-61720479|C/-|frameshift_variant'] 108713 18099 SYRELFEFF True NCI_RA007_Epitope_Rep4 1236.5815245361598 1236.5804299358601 78.315 2 0.1852653683469631 0.0004893964110929853 0.0013409216477158015 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 139614 14289 YLYPDITRL True H1975_Epitope_Rep2 1152.6179100448799 1152.6168099358601 60.112 2 0.185262384864004 0.0004893964110929853 0.0013410138690603797 ['ENSG00000131389|ENST00000622186|SLC6A6'] 73066 15269 MRDPTFVRL True PC9_epitope_Rep3 1133.60154878809 1133.59990490379 63.883 3 0.18525715955674452 0.0004893964110929853 0.0013411754019296302 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 72904 19110 MPTLPPPSV True PC9_epitope_Rep5 937.49428975489 937.49318993586 78.539 2 0.18525608849678776 0.0004893964110929853 0.0013412085146184355 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 140734 10628 YSDASGFGY True H1975_Epitope_Rep3 965.37667672001 965.3761249679301 45.951 1 0.1852548686443062 0.0004893964110929853 0.0013412462283471736 ['ENSG00000090006|ENST00000396819|LTBP4', 'nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 4236 21124 AIDPHLLLSV True PC9_epitope_Rep1 1076.6229954253201 1076.62188993586 86.083 2 0.185247904318416 0.0004893964110929853 0.0013414615621981168 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 17347 21877 EHDAFIFAL True PC9_epitope_Rep1 1061.51819600361 1061.5170899358602 88.962 2 0.18524005700382581 0.0004893964110929853 0.0013417042391880853 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 483 10285 AAM[Oxidation]LDTVVFK True NCI_RA007_Epitope_Rep5 1109.57908238845 1109.5779899358602 46.191 2 0.18523911767611825 0.0004893964110929853 0.0013417332907009805 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 65840 9900 LSDLGKLSY True H1975_Epitope_Rep3 994.5335117145801 994.53240993586 43.112 2 0.18523228448344786 0.0004893964110929853 0.001341944646556622 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 1917 2742 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5971499358602 14.592 2 0.1852294211932495 0.0004893964110929853 0.00134203322022552 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 78530 9019 NYPQSVPRL True NCI_RA007_Epitope_Rep4 1072.56654317836 1072.5654499358602 41.524 2 0.18522714262078419 0.0004893964110929853 0.001342103710290509 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 118305 20370 TYLSIIHSL True PC9_epitope_Rep2 1045.58079626017 1045.5796899358602 83.776 2 0.18522545192660436 0.0004893964110929853 0.001342156016113347 ['ENSG00000133030|ENST00000651222|MPRIP'] 7158 7412 AQYEDIANR True PC9_epitope_Rep5 1078.5043368446197 1078.5032299358602 33.465 2 0.18522045035111973 0.0004893964110929853 0.0013423107642348427 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 70463 16436 LVTYVPVTTF True NCI_RA007_Epitope_Rep5 1138.62741209942 1138.62630993586 69.976 2 0.18521123078646323 0.0004893964110929853 0.0013425960632842207 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 41258 6473 HVLVTLGEK True NCI_RA007_Epitope_Rep4 994.58113061334 994.58002993586 31.496 2 0.18521083918490738 0.0004893964110929853 0.0013426081827238579 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 110791 12600 TGISDVFAK True PC9_epitope_Rep6 936.4916469026 936.49054993586 59.919 2 0.18520154529814278 0.0004893964110929853 0.0013428958457890865 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 41222 13162 HVLDVIHEV True PC9_epitope_Rep6 1059.57129420563 1059.57018993586 62.271 2 0.18519947219483307 0.0004893964110929853 0.0013429600206154994 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 106254 15249 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.5586299358602 63.813 2 0.18519807611539751 0.0004893964110929853 0.0013430032392751008 ['ENSG00000131459|ENST00000253778|GFPT2'] 30168 11904 FYQEHPDL True PC9_epitope_Rep1 1047.4661604307498 1047.4650699358601 50.655 2 0.185198013699152 0.0004893964110929853 0.0013430051715375897 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 117966 11044 TYAPAIHQI True PC9_epitope_Rep4 1012.5341804209202 1012.53308993586 50.256 2 0.18518814581143692 0.0004893964110929853 0.0013433106935488168 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 142711 20512 YYQEYPMSI True PC9_epitope_Rep1 1192.5110620178398 1192.50996993586 83.71 2 0.18516864131480204 0.0004893964110929853 0.0013439147818484355 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 103999 15678 SQDARFYAL True PC9_epitope_Rep3 1069.51925863277 1069.5181699358602 65.448 2 0.1851660583777727 0.0004893964110929853 0.0013439948003309476 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 92508 19457 RLYDGLFKVI True PC9_epitope_Rep4 1222.70739375562 1222.70628993586 82.956 2 0.18516535939931103 0.0004893964110929853 0.0013440164552593642 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 76849 18347 NRDELELEL True PC9_epitope_Rep2 1129.5615173675699 1129.5604299358602 75.903 2 0.18516144393701456 0.0004893964110929853 0.001344137765972916 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 24300 19200 EYTRALFLL True PC9_epitope_Rep6 1124.62299542532 1124.62188993586 86.506 2 0.1851484687205607 0.0004893964110929853 0.0013445398487484479 ['ENSG00000129933|ENST00000262815|MAU2'] 49762 17536 KGVDEVTIVNI True PC9_epitope_Rep4 1185.66050313285 1185.6594099358601 75.465 2 0.18514845351744588 0.0004893964110929853 0.0013445403199412063 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 106177 8554 STDPREALQY True H1975_Epitope_Rep1 1178.5567663402999 1178.5556699358601 37.829 2 0.1851473659832896 0.0004893964110929853 0.0013445740265042468 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 113216 11759 TLQKEGVIGV True PC9_epitope_Rep5 1042.6022599807397 1042.60116993586 50.229 2 0.1851440537003221 0.0004893964110929853 0.0013446766911875555 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 84364 21197 PYYSKFILI True PC9_epitope_Rep5 1142.6375828603 1142.63648993586 86.582 2 0.18514117754097006 0.0004893964110929853 0.0013447658445307855 ['ENSG00000164815|ENST00000297431|ORC5'] 134559 19661 VYSEAARVLQF True PC9_epitope_Rep3 1281.67173652289 1281.67062993586 80.861 2 0.1851372673584003 0.0004893964110929853 0.001344887059365604 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 28603 7879 FSHAQTVVL True NCI_RA007_Epitope_Rep3 1000.5341804209199 1000.53308993586 38.109 2 0.18513344910862767 0.0004893964110929853 0.0013450054348716992 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 75750 22000 NLLKLIAEV True PC9_epitope_Rep5 1011.6328318330299 1011.63172993586 89.648 2 0.18513038385292335 0.0004893964110929853 0.0013451004731937222 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 21921 8674 ESDSRQIFY True H1975_Epitope_Rep2 1143.5196525555898 1143.5185499358602 38.325 2 0.18512444594694843 0.0004893964110929853 0.0013452845972519707 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 108918 4765 TADGIVSHLKK True NCI_RA007_Epitope_Rep4 1167.66117183919 1167.65953490379 24.761 3 0.18512266441844008 0.0004893964110929853 0.0013453398442556123 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 24041 10441 EYNNNFHVL True NCI_RA007_Epitope_Rep4 1148.5250722892001 1148.5239699358601 47.012 2 0.1851161636784306 0.0004893964110929853 0.001345541458078405 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 86300 7110 QISEVVVVK True NCI_RA007_Epitope_Rep3 999.5964463243099 999.59534993586 35.085 2 0.18511571180573275 0.0004893964110929853 0.001345555473575054 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 77194 6576 NRSEVQANL True PC9_epitope_Rep5 1029.52032126193 1029.51922993586 30.265 2 0.18511158218973056 0.0004893964110929853 0.0013456835664716808 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 97393 9586 SEDSRFITV True H1975_Epitope_Rep2 1052.51383889916 1052.51274993586 41.847 2 0.185110874554849 0.0004893964110929853 0.001345705517197179 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'PTPRG|p.F707L|1|0.16|ENSG00000144724|chr3:62203914-62203914|T/C|missense_variant'] 17439 6842 EHDTTEYKL True PC9_epitope_Rep3 1134.51931820242 1134.51766490379 31.334 3 0.1851063984721633 0.0004893964110929853 0.001345844372910905 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 66971 13734 LSPEELLLR True H1975_Epitope_Rep1 1068.6179100448799 1068.6168099358601 57.968 2 0.1851010271195103 0.0004893964110929853 0.0013460110203823733 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion', 'ENSG00000120756|ENST00000457734|PLS1'] 60988 11750 LIEEGGLQHLY True H1975_Epitope_Rep2 1270.65575210558 1270.65464993586 50.271 2 0.18510062905877142 0.0004893964110929853 0.001346023371133002 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 25633 5362 FENVGSPKP True H1975_Epitope_Rep3 973.4868958753299 973.48578993586 25.69 2 0.18509959880175922 0.0004893964110929853 0.0013460553377555968 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 21245 20833 ERDPVLWSL True PC9_epitope_Rep1 1113.58185888933 1113.5807699358602 84.961 2 0.1850962925348782 0.0004893964110929853 0.0013461579291278493 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 74759 14067 NHASLISAL True PC9_epitope_Rep4 924.50288029264 924.50178993586 62.019 2 0.18508683442304957 0.0004893964110929853 0.0013464514516427816 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 54101 15548 KVLNELTQL True PC9_epitope_Rep4 1056.6179100448799 1056.6168099358601 67.728 2 0.185086295250631 0.0004893964110929853 0.001346468186222172 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 134165 12486 VYLPNINKI True NCI_RA007_Epitope_Rep1 1072.62808080576 1072.6269899358601 52.545 2 0.1850845727428588 0.0004893964110929853 0.0013465216500034083 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 48339 20173 IYSIDFTRF True PC9_epitope_Rep4 1160.5866099165999 1160.58550993586 85.732 2 0.18508163393188673 0.0004893964110929853 0.0013466128707286312 ['ENSG00000175970|ENST00000344651|UNC119B'] 105165 11465 SRFPQGAQL True PC9_epitope_Rep5 1002.5246783663797 1002.52358993586 49.098 2 0.1850782011505853 0.0004893964110929853 0.0013467194321419634 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 551 4663 AAQDSTDLVAK True NCI_RA007_Epitope_Rep4 1117.5615173675699 1117.5604299358602 24.359 2 0.18506613649862025 0.0004893964110929853 0.0013470940136986816 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 95786 14274 RYIEFHSQSGF True PC9_epitope_Rep5 1369.6414990237697 1369.6398449037902 59.908 3 0.18506435124706702 0.0004893964110929853 0.001347149450798088 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 106639 5427 STSNSFNLK True NCI_RA007_Epitope_Rep5 996.48762415132 996.48652993586 27.562 2 0.1850585458257616 0.0004893964110929853 0.0013473297413243675 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 29702 22033 FVLPVATQI True PC9_epitope_Rep1 986.58006798418 986.57896993586 89.565 2 0.1850579662399094 0.0004893964110929853 0.0013473477420069897 ['ENSG00000111678|ENST00000229281|C12orf57'] 7269 15223 ARDFTVSAL True PC9_epitope_Rep5 978.5134449763399 978.51234993586 63.564 2 0.18505695919629128 0.0004893964110929853 0.0013473790191763052 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 140644 20998 YRSEGWWTL True PC9_epitope_Rep1 1196.5614577979197 1196.56036993586 85.596 2 0.1850560055170088 0.0004893964110929853 0.0013474086396053715 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 96251 13184 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.6020249037902 58.609 3 0.18505430679623397 0.0004893964110929853 0.001347461401976319 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 58571 11735 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.59187496793 50.132 1 0.18505131406999056 0.0004893964110929853 0.0013475543612742565 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 18074 6031 EIGQSVDEVEK True H1975_Epitope_Rep3 1231.5932114186696 1231.5921099358602 28.213 2 0.18505093192736283 0.0004893964110929853 0.0013475662317537264 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 137525 6457 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 29.811 2 0.18504964996242257 0.0004893964110929853 0.0013476060541392952 ['ENSG00000127184|ENST00000247655|COX7C'] 89535 20604 QYLQDAYSF True PC9_epitope_Rep1 1133.5029398622898 1133.50184993586 84.07 2 0.18504844032681436 0.0004893964110929853 0.001347643630800453 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 25432 9292 FEDVAFDEK True NCI_RA007_Epitope_Rep2 1098.48695544498 1098.4858499358602 40.754 2 0.18504836777398914 0.0004893964110929853 0.001347645884647226 ['ENSG00000185624|ENST00000331483|P4HB'] 31611 10584 GEEWKGYVV True H1975_Epitope_Rep2 1065.5131106231697 1065.51200993586 45.733 2 0.18504641665864124 0.0004893964110929853 0.0013477064972812587 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000497406.2_1_12:59414000-59414099:+|nuORF', 'ENST00000397390.3_1_9:19200870-19200993:-|nuORF'] 44032 19193 IIIPEIQKV True PC9_epitope_Rep3 1051.66413196131 1051.66302993586 79.043 2 0.18503853255594627 0.0004893964110929853 0.0013479514497558953 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 134853 13608 VYVERAEVL True PC9_epitope_Rep3 1076.5866099165999 1076.58550993586 57.407 2 0.1850249294790362 0.0004893964110929853 0.0013483741909017031 ['ENSG00000089234|ENST00000419234|BRAP'] 84214 15557 PYLFHVVTF True NCI_RA007_Epitope_Rep3 1121.59096702105 1121.5898699358602 68.759 2 0.18502345372014578 0.0004893964110929853 0.0013484200608686909 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 53662 10141 KSDLFFHDY True H1975_Epitope_Rep2 1170.53457434374 1170.53346993586 44.007 2 0.18501094263655263 0.0004893964110929853 0.0013488089968497954 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 31682 10296 GEFSITYKP True NCI_RA007_Epitope_Rep5 1040.5178616504397 1040.51676993586 46.235 2 0.18500784649400256 0.0004893964110929853 0.0013489052649604334 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 109829 5617 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 26.605 2 0.18500732785342497 0.0004893964110929853 0.0013489213916835297 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 94908 7394 RTEPFQDGY True H1975_Epitope_Rep2 1111.4934378077498 1111.4923499358601 33.383 2 0.18499425689222657 0.0004893964110929853 0.0013493278868129755 ['ENSG00000164543|ENST00000319357|STK17A'] 54195 11312 KVVDVDVKL True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 51.289 2 0.1849869431773848 0.0004893964110929853 0.001349555390331772 ['ENSG00000101350|ENST00000375712|KIF3B'] 115768 12930 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45454993586 54.809 2 0.18498404261277038 0.0004893964110929853 0.001349645627173474 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 110938 15730 THAAEDIVYTL True PC9_epitope_Rep6 1231.6084675599898 1231.60736993586 72.731 2 0.18495693942017938 0.0004893964110929853 0.001350489102409906 ['ENSG00000075420|ENST00000415807|FNDC3B'] 141894 7271 YVDSEGHLY True H1975_Epitope_Rep2 1081.47163973401 1081.4705499358602 32.904 2 0.18494568325966584 0.0004893964110929853 0.0013508395593104404 ['ENSG00000105974|ENST00000341049|CAV1', 'ENST00000489856.1_1_7:116165116-116166890:+|nuORF'] 120839 10856 VELQELNDR True PC9_epitope_Rep5 1114.5618517207397 1114.56074993586 46.745 2 0.18494135155853925 0.0004893964110929853 0.0013509744497063633 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 43767 19226 IHLIDPNTL True PC9_epitope_Rep3 1034.5760452329 1034.57494993586 79.173 2 0.18493925259025004 0.0004893964110929853 0.0013510398170274453 ['ENSG00000169251|ENST00000351193|NMD3', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 28359 20297 FRVDYILSV True PC9_epitope_Rep4 1110.60734536118 1110.6062499358602 86.215 2 0.18493188516667686 0.0004893964110929853 0.0013512692828157426 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 40860 11214 HSELLEDYY True H1975_Epitope_Rep3 1167.50841916555 1167.50732993586 48.234 2 0.18492281641110256 0.0004893964110929853 0.0013515517919319671 ['ENSG00000117528|ENST00000370214|ABCD3'] 129376 7908 VRDQTELRL True PC9_epitope_Rep2 1128.62512068364 1128.6234749037899 35.784 3 0.18491845969037776 0.0004893964110929853 0.00135168753318371 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1'] 4849 16004 ALELDSNLYR True PC9_epitope_Rep2 1192.60880191316 1192.6077099358602 66.815 2 0.18491474795648924 0.0004893964110929853 0.0013518031895228635 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 40865 5613 HSERHVLLY True H1975_Epitope_Rep2 1152.60399131624 1152.60235490379 26.593 3 0.18490308737202285 0.0004893964110929853 0.001352166593818468 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 24597 21778 FAIDPHLLLSV True PC9_epitope_Rep4 1223.69140933831 1223.6903099358601 91.963 2 0.18490013264809643 0.0004893964110929853 0.001352258693891302 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 115720 8334 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 38.731 2 0.1848993179391766 0.0004893964110929853 0.0013522840898404025 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 77570 4798 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 23.545 2 0.18489759222670904 0.0004893964110929853 0.0013523378849949344 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 75771 21737 NLLQVLEKV True PC9_epitope_Rep5 1054.63864548946 1054.63754993586 88.643 2 0.18489698743652333 0.0004893964110929853 0.0013523567384586897 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 136033 20310 WRDEFLIQA True PC9_epitope_Rep5 1176.5927579262 1176.5916699358602 83.167 2 0.18489593872387625 0.0004893964110929853 0.001352389431190879 ['ENSG00000075785|ENST00000265062|RAB7A'] 25537 7331 FEIIDDHRA True H1975_Epitope_Rep2 1114.54072235334 1114.5396299358601 33.139 2 0.184895304723382 0.0004893964110929853 0.0013524091960057294 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000492525.1_1_8:29974982-29975219:-|nuORF', 'ENST00000406202.2_1_6:157297523-157298164:+|nuORF', 'RPS15A|p.G48R|1|0.21|ENSG00000134419|chr16:18788134-18788134|C/G|missense_variant'] 105047 15295 SRDPNYLNL True PC9_epitope_Rep3 1090.54072235334 1090.5396299358601 63.985 2 0.18489366240142469 0.0004893964110929853 0.0013524603963491722 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 6771 19313 AQDFRVLYV True PC9_epitope_Rep2 1109.58694426977 1109.58584993586 79.661 2 0.18488933768552018 0.0004893964110929853 0.0013525952311806001 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 76722 16673 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53856993586 69.136 2 0.18488731462072444 0.0004893964110929853 0.001352658310377308 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 32451 15367 GFVTFDDHD True PC9_epitope_Rep5 1051.42468954159 1051.42358993586 64.119 2 0.18488103978763526 0.0004893964110929853 0.0013528539785423435 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 29566 16176 FVIETARQL True PC9_epitope_Rep1 1075.6025943339098 1075.6014899358602 67.035 2 0.1848745911664691 0.0004893964110929853 0.0013530550955020999 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BP2|p.L310Pfs*23|1|0.15|ENSG00000168264|chr1:234608566-234608567|-/GGGTGTTTGTTGTTTCTGG|frameshift_variant', 'IRF2BP2|p.A444Efs*22|1|0.06|ENSG00000168264|chr1:234607570-234607571|-/CT|frameshift_variant', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2'] 15006 13266 DYKESFNTI True PC9_epitope_Rep6 1115.5135045459901 1115.5124099358602 62.679 2 0.18487054822986523 0.0004893964110929853 0.0013531812002390616 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 92723 4701 RNVSTGDVNVE True NCI_RA007_Epitope_Rep5 1188.5734790335998 1188.5723899358602 24.769 2 0.18486173620319638 0.0004893964110929853 0.0013534561002575838 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 16448 7861 EELEAALQR True H1975_Epitope_Rep3 1057.5403880001697 1057.53928993586 35.213 2 0.1848616894139363 0.0004893964110929853 0.0013534575600449125 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 76394 13470 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52838993586 56.67 2 0.18486019414554564 0.0004893964110929853 0.0013535042120486574 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 116306 6139 TTDSSYGQNY True H1975_Epitope_Rep3 1134.4465471849799 1134.44544993586 28.625 2 0.1848577116340115 0.0004893964110929853 0.0013535816693535372 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 2067 6576 AELDEKISA True H1975_Epitope_Rep3 974.49204082542 974.49094993586 30.25 2 0.18485715231166244 0.0004893964110929853 0.001353599121487628 ['nc|ENSG00000151332|Q9NS73-5|MBIP', 'ENSG00000151332|ENST00000416007|MBIP'] 106542 13602 STLTEEGVIKV True PC9_epitope_Rep6 1174.64451871554 1174.64342993586 64.073 2 0.18485366037073955 0.0004893964110929853 0.0013537080831153118 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 62186 19029 LLEPFVHQV True PC9_epitope_Rep1 1080.59678067748 1080.59568993586 77.985 2 0.18485329431463163 0.0004893964110929853 0.0013537195059451846 ['nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2', 'IP6K2|p.Y298Vfs*5|1|0.17|ENSG00000068745|chr3:48688662-48688663|-/C|frameshift_variant', 'ENSG00000068745|ENST00000328631|IP6K2'] 64761 12097 LQAEIEGLK True PC9_epitope_Rep1 999.5600608155898 999.55896993586 51.391 2 0.18484168155002442 0.0004893964110929853 0.0013540819339728826 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'KRT8|p.G326V|1|0.47|ENSG00000170421|chr12:52899779-52899779|C/A|missense_variant', 'CON__H-INV:HIT000292931'] 84172 22588 PYISNIYLI True PC9_epitope_Rep3 1094.60119735158 1094.60010993586 92.155 2 0.1848393157730937 0.0004893964110929853 0.0013541557805002984 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 67952 11164 LTDDGNKWLY True H1975_Epitope_Rep3 1223.58225281215 1223.58167496793 48.04 1 0.18483768406271028 0.0004893964110929853 0.001354206715864831 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 85016 6561 QEGPVGPAP True H1975_Epitope_Rep3 850.4184819623398 850.41793496793 30.196 1 0.18483489597166444 0.0004893964110929853 0.001354293753176474 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000550016.5_1_12:113600735-113603481:-|nuORF'] 106978 9012 SVEGQLEFR True NCI_RA007_Epitope_Rep2 1063.52982331647 1063.5287299358602 39.655 2 0.1848337276188377 0.0004893964110929853 0.0013543302279312417 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 48134 20566 IYPEVVHMF True PC9_epitope_Rep1 1133.5579526406098 1133.55684993586 83.921 2 0.184828698250554 0.0004893964110929853 0.0013544872507977813 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 35131 18614 GQWASVIRV True PC9_epitope_Rep5 1014.5610638750999 1014.55996993586 76.625 2 0.1848252336423968 0.0004893964110929853 0.0013545954306048013 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 23853 19990 EYIPKWEQF True PC9_epitope_Rep3 1238.5971746003 1238.5960699358602 82.138 2 0.1848249284918129 0.0004893964110929853 0.00135460495911927 ['ENSG00000114405|ENST00000462069|C3orf14'] 72498 7807 M[Oxidation]LDSHEELY True H1975_Epitope_Rep3 1151.48049054599 1151.4793899358601 35.012 2 0.1848131257470671 0.0004893964110929853 0.0013549735586320328 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 138495 14833 YHSEVPVSL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 62.191 2 0.1848066226267353 0.0004893964110929853 0.0013551766939208323 ['ENSG00000115306|ENST00000356805|SPTBN1'] 27976 21041 FQIIQSIRMGM True PC9_epitope_Rep1 1322.6838985130598 1322.6828099358602 85.764 2 0.184799727332031 0.0004893964110929853 0.0013553921127402043 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 23946 19238 EYLLKVNEI True PC9_epitope_Rep3 1119.61757569171 1119.61646993586 79.219 2 0.18479474878665958 0.0004893964110929853 0.00135554767091961 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 62062 18269 LLDTPAQLWY True H1975_Epitope_Rep1 1218.62847472858 1218.62736993586 76.135 2 0.18478697460960772 0.0004893964110929853 0.0013557906163826812 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4', 'nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF'] 64091 8672 LPDGYEFK True H1975_Epitope_Rep1 967.4650978015899 967.46400993586 38.286 2 0.1847818954772424 0.0004893964110929853 0.0013559493644273066 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 17635 12091 EHIQNIM[Oxidation]TL True PC9_epitope_Rep5 1113.54884488933 1113.54774993586 51.503 2 0.18477727648806325 0.0004893964110929853 0.0013560937468936284 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 44295 17602 ILDEAIYKV True PC9_epitope_Rep5 1062.5961119711399 1062.5950099358602 72.714 2 0.18477342496373553 0.0004893964110929853 0.0013562141513760286 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 107957 8254 SVYDSVLQK True NCI_RA007_Epitope_Rep3 1037.5393253710097 1037.53822993586 39.596 2 0.18477322143891053 0.0004893964110929853 0.0013562205141682943 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 134347 5538 VYPEEHSRW True NCI_RA007_Epitope_Rep3 1201.55162139021 1201.54996490379 28.781 3 0.1847716233025408 0.0004893964110929853 0.0013562704777114977 ['nc|ENSG00000117616|Q9BUV0-3|RSRP1', 'nc|ENSG00000117616|Q9BUV0-2|RSRP1', 'ENSG00000117616|ENST00000243189|RSRP1'] 8796 10355 AVDPTSGQLY True H1975_Epitope_Rep2 1049.50293986229 1049.50184993586 44.839 2 0.18477082462040006 0.0004893964110929853 0.0013562954481053657 ['ENSG00000132182|ENST00000254508|NUP210', 'NUP210|p.K1258R|1|0.07|ENSG00000132182|chr3:13335524-13335524|T/C|missense_variant'] 76454 14414 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 63.352 2 0.18476681569014194 0.0004893964110929853 0.0013564207922472456 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 137051 12465 YALYDATYETK True PC9_epitope_Rep6 1336.61869789052 1336.6176099358602 59.372 2 0.18475477608745802 0.0004893964110929853 0.0013567972950520282 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 108922 10912 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 47.004 2 0.18475354896368984 0.0004893964110929853 0.0013568356755839642 ['ENSG00000183751|ENST00000568546|TBL3'] 131012 5345 VTDQASHIY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 25.607 2 0.18475050319653366 0.0004893964110929853 0.001356930942204361 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 114832 7493 TQLQTTQSV True PC9_epitope_Rep4 1004.5138388991599 1004.51274993586 36.185 2 0.18474380600013854 0.0004893964110929853 0.0013571404431450662 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 107558 11718 SVPEFPLSPPK True NCI_RA007_Epitope_Rep5 1196.6441247927198 1196.64302993586 51.727 2 0.1847435670582413 0.0004893964110929853 0.001357147918297446 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 95250 6461 RVLTSVFTK True NCI_RA007_Epitope_Rep3 1049.62332977849 1049.62222993586 32.444 2 0.1847394570548016 0.0004893964110929853 0.001357276503723276 ['ENSG00000178573|ENST00000326043|MAF'] 116781 12956 TVDSYVISY True H1975_Epitope_Rep2 1045.49679185269 1045.4956899358601 54.951 2 0.18473915357603318 0.0004893964110929853 0.001357285998833669 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 41337 5992 HWGGNVLGPK True NCI_RA007_Epitope_Rep5 1063.55631284783 1063.5552099358601 29.732 2 0.18473449663447858 0.0004893964110929853 0.0013574317115252826 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000429766.1_1_7:96830042-96830234:-|nuORF', 'ENST00000574864.1_1_6:137221518-137222013:-|nuORF'] 95863 18303 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.6263299358602 75.417 2 0.18472923047875445 0.0004893964110929853 0.001357596505024976 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 40157 18508 HQDNNFLYL True PC9_epitope_Rep4 1162.54072235334 1162.5396299358601 79.263 2 0.18472310017619176 0.0004893964110929853 0.001357788365479024 ['XPNPEP3|p.D217*|1|0.36|ENSG00000196236|chr22:40886370-40886371|-/T|frameshift_variant', 'nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 54056 16156 KVIEGLDTGL True PC9_epitope_Rep5 1043.5862755634298 1043.5851699358602 67.131 2 0.18472281762216183 0.0004893964110929853 0.0013577972092449308 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 40730 6709 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.61258490379 30.609 3 0.18471644965874714 0.0004893964110929853 0.0013579965378647343 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 24860 16332 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 68.068 2 0.18471173218108433 0.0004893964110929853 0.0013581442222468615 ['ENSG00000204592|ENST00000376630|HLA-E'] 2427 11189 AEQFSSLTP True H1975_Epitope_Rep2 978.4658260775799 978.4652749679301 48.077 1 0.18471100300981846 0.0004893964110929853 0.0013581670509684157 ['ENST00000366535.3_1_1:244615028-244615205:-|nuORF'] 23090 17891 EVIKELAQI True PC9_epitope_Rep5 1041.6070110080097 1041.6059099358602 73.836 2 0.18470416796731254 0.0004893964110929853 0.0013583810595635987 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 18716 6418 ELAM[Oxidation]PGEDLK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 29.663 2 0.18470330692340572 0.0004893964110929853 0.001358408021675497 ['ENSG00000178952|ENST00000313511|TUFM', 'ENST00000569217.1_1_16:28854298-28855510:-|nuORF'] 90405 4114 REIEEGQPEA True NCI_RA007_Epitope_Rep4 1156.53603089572 1156.5349299358602 22.107 2 0.1847031785554023 0.0004893964110929853 0.0013584120413451164 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 75394 20802 NIVDKFVIV True PC9_epitope_Rep1 1045.61718176889 1045.6160899358601 84.841 2 0.18469176973115714 0.0004893964110929853 0.0013587693407959528 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 65369 14034 LRDSFQQVV True PC9_epitope_Rep1 1090.57710786206 1090.5760099358602 58.82 2 0.18469060333289714 0.0004893964110929853 0.0013588058751483382 ['ARNT|p.Q581Afs*21|1|0.22|ENSG00000143437|chr1:150816846-150816850|GTTGG/-|frameshift_variant', 'ARNT|p.P578Lfs*28|1|0.36|ENSG00000143437|chr1:150816857-150816857|G/-|frameshift_variant', 'nc|ENSG00000143437|P27540-2|ARNT', 'nc|ENSG00000143437|P27540-3|ARNT', 'nc|ENSG00000143437|P27540-4|ARNT', 'ENSG00000143437|ENST00000358595|ARNT'] 120611 4819 VEHSDLSFSK True NCI_RA007_Epitope_Rep5 1147.5509526838698 1147.54930490379 25.224 3 0.1846870387901048 0.0004893964110929853 0.001358917531162172 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 4189 19760 AHWQFETAL True PC9_epitope_Rep3 1101.5243440132099 1101.5232499358601 81.236 2 0.18468245474430348 0.0004893964110929853 0.0013590611356849303 ['ENSG00000185262|ENST00000327490|UBALD2', 'ENSG00000153443|ENST00000283474|UBALD1'] 92887 12850 RPFQSLIHA True PC9_epitope_Rep1 1067.58761297611 1067.58650993586 54.302 2 0.18468224989875065 0.0004893964110929853 0.0013590675532419564 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 134321 13827 VYNSEYYHF True PC9_epitope_Rep6 1220.5138388991602 1220.51274993586 64.992 2 0.18468013839720043 0.0004893964110929853 0.0013591337057360618 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 11683 15218 DGTGVVEFVR True PC9_epitope_Rep2 1077.5454733806098 1077.54436993586 63.8 2 0.18467981554278565 0.0004893964110929853 0.001359143820919457 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 105657 14658 SSEELPLYY True H1975_Epitope_Rep2 1099.5073565363898 1099.50624993586 61.542 2 0.18467678531069032 0.0004893964110929853 0.0013592387632195531 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 8462 13142 ATQLAADLLKY True H1975_Epitope_Rep3 1205.66558851329 1205.66448993586 55.8 2 0.18466510429932737 0.0004893964110929853 0.0013596048112817483 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1'] 77544 11092 NTDLGNDLY True H1975_Epitope_Rep3 1023.4509042894299 1023.4503749679301 47.758 1 0.18466080183016648 0.0004893964110929853 0.0013597396627325461 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 54628 12169 KYLEERAMRQF True PC9_epitope_Rep5 1469.74491854649 1469.74327490379 51.797 3 0.18465523110199336 0.0004893964110929853 0.0013599142848943503 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 64570 12662 LPSITTEILK True H1975_Epitope_Rep3 1113.66452588413 1113.6634299358602 53.913 2 0.18464841512106192 0.0004893964110929853 0.0013601279717983077 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 68125 11658 LTDPIQGTEY True H1975_Epitope_Rep3 1135.53971929383 1135.5386299358602 49.977 2 0.1846393509333048 0.0004893964110929853 0.001360412194070762 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 45330 5093 IQASTM[Oxidation]AFK True NCI_RA007_Epitope_Rep5 1011.50591744819 1011.50480993586 26.288 2 0.184633969374427 0.0004893964110929853 0.0013605809697200342 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.Q89H|1|0.32|ENSG00000158710|chr1:159919749-159919749|C/G|missense_variant'] 60897 11975 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 53.853 2 0.18462931303464375 0.0004893964110929853 0.0013607270180911507 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 16394 20378 EEIVQFFQGL True H1975_Epitope_Rep1 1208.6077392839998 1208.60664993586 84.752 2 0.18462576297712482 0.0004893964110929853 0.0013608383779357418 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3'] 43648 15393 IHDDLPTEL True PC9_epitope_Rep2 1051.5185899264302 1051.51748993586 64.491 2 0.1846148114814657 0.0004893964110929853 0.0013611819670692488 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 78517 21061 NYPETLGRLLI True PC9_epitope_Rep5 1287.7186867153098 1287.7175899358601 86.071 2 0.18461298736069218 0.0004893964110929853 0.001361239204966515 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 74774 19418 NHDFTPLEI True PC9_epitope_Rep3 1084.5189242796 1084.5178299358602 79.917 2 0.18460227251357808 0.0004893964110929853 0.0013615754678802943 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 76744 16996 NQVLNLIKA True PC9_epitope_Rep1 1011.6076797143498 1011.60658993586 70.198 2 0.18459771354097446 0.0004893964110929853 0.0013617185668828473 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 35579 4405 GTADVHFER True NCI_RA007_Epitope_Rep4 1030.48320747722 1030.48210993586 23.3 2 0.18458728230244045 0.0004893964110929853 0.0013620460438130513 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 134113 18480 VYKVVGNLL True PC9_epitope_Rep3 1003.6066170851898 1003.60552993586 76.291 2 0.18458306343304193 0.0004893964110929853 0.0013621785128615873 ['ENSG00000183856|ENST00000361170|IQGAP3'] 105632 8528 SSDSVGGFRY True H1975_Epitope_Rep3 1073.47778774361 1073.4766899358601 37.789 2 0.18458203041467164 0.0004893964110929853 0.0013622109507615376 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 96257 13444 RYQFLEEAF True NCI_RA007_Epitope_Rep5 1201.57677350889 1201.57566993586 58.398 2 0.18458037203679098 0.0004893964110929853 0.0013622630272491821 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 104899 12983 SRDDNM[Oxidation]FQI True PC9_epitope_Rep3 1140.48697290876 1140.4858699358601 54.966 2 0.18457358305241348 0.0004893964110929853 0.00136247623617414 ['ENSG00000113387|ENST00000265073|SUB1'] 135439 12420 WHSDDEPSL True PC9_epitope_Rep1 1084.44615326216 1084.4450499358602 52.636 2 0.18455980970711644 0.0004893964110929853 0.0013629088926147782 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 141285 8494 YTDMESEDY True H1975_Epitope_Rep1 1151.39648575807 1151.39597496793 37.602 1 0.18455747002607586 0.0004893964110929853 0.0013629824017365258 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 61427 16433 LIVKEWNSV True PC9_epitope_Rep5 1086.60734536118 1086.6062499358602 68.208 2 0.1845546315186622 0.0004893964110929853 0.0013630715885384307 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 136978 12460 YAIGNAPEL True H1975_Epitope_Rep2 946.4759968384599 946.47488993586 53.017 2 0.1845508373251666 0.0004893964110929853 0.0013631908124348284 ['BAP1|p.G554Vfs*17|1|0.73|ENSG00000163930|chr3:52403484-52403484|C/-|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 60432 5313 LGVIEDHSNR True PC9_epitope_Rep3 1138.5730851107799 1138.57144490379 25.513 3 0.1845418724499103 0.0004893964110929853 0.001363472554764977 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 83308 4775 PTDSLNNDNKY True H1975_Epitope_Rep2 1279.5680592999902 1279.56696993586 23.456 2 0.18453872900555585 0.0004893964110929853 0.0013635713587308992 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 115426 19608 TRLPTPVLL True PC9_epitope_Rep5 1008.6331661861999 1008.63206993586 80.474 2 0.18452112539459525 0.0004893964110929853 0.001364124803717053 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 78354 14922 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6069699358602 62.22 2 0.1845186475325294 0.0004893964110929853 0.0013642027240091678 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 54220 19241 KVYLEDGFAYV True PC9_epitope_Rep4 1302.6496040959798 1302.6485099358601 82.112 2 0.1845183323686495 0.0004893964110929853 0.0013642126351556835 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 21476 20069 ERLGQFMTL True PC9_epitope_Rep3 1093.55901526977 1093.5579099358602 82.445 2 0.18451783993635262 0.0004893964110929853 0.0013642281211123236 ['ENSG00000113739|ENST00000265087|STC2'] 70181 10879 LVQAFQFTDK True H1975_Epitope_Rep1 1195.62372370131 1195.62262993586 46.805 2 0.18451460216953963 0.0004893964110929853 0.0013643299464343901 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 52373 6972 KKLADPVTL True NCI_RA007_Epitope_Rep4 983.60153170475 983.60042993586 33.444 2 0.18450981149445583 0.0004893964110929853 0.0013644806235237638 ['ENSG00000065526|ENST00000375759|SPEN'] 91761 10179 RKFLETVEL True NCI_RA007_Epitope_Rep5 1133.6444591458899 1133.6433699358602 45.787 2 0.18450216676654585 0.0004893964110929853 0.0013647211012900824 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 44772 8477 IM[Oxidation]ELINNVAK True NCI_RA007_Epitope_Rep1 1159.6270952100301 1159.6259899358602 36.973 2 0.18449695597556703 0.0004893964110929853 0.0013648850398242215 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 38447 8999 HENPDIIIA True H1975_Epitope_Rep2 1020.52400966004 1020.52290993586 39.566 2 0.18449524564916767 0.0004893964110929853 0.0013649388533092562 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000546869.1_1_12:113614643-113615134:-|nuORF'] 111294 16290 THMELYSQL True PC9_epitope_Rep5 1120.52229540788 1120.52118993586 67.653 2 0.18447945196667673 0.0004893964110929853 0.0013654358841590352 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 31526 5775 GEDLANINR True H1975_Epitope_Rep3 1000.49377216092 1000.49266993586 27.239 2 0.18447936069769058 0.0004893964110929853 0.0013654387569423132 ['CON__P28800'] 129691 10926 VRPPVQVY True PC9_epitope_Rep2 956.5443511817998 956.54324993586 47.348 2 0.18446145437490816 0.0004893964110929853 0.0013660024936919687 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 4875 5584 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep4 1219.5754535599897 1219.57434993586 28.259 2 0.18445871426343521 0.0004893964110929853 0.0013660887799734284 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 27824 15143 FQDENHLYL True PC9_epitope_Rep4 1177.54038800017 1177.53928993586 66.175 2 0.1844329940923342 0.0004893964110929853 0.0013668989761182167 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 83314 17008 PTDYADIMMGY True H1975_Epitope_Rep2 1275.51516142211 1275.51406993586 70.675 2 0.1844325027510367 0.0004893964110929853 0.0013669144582617273 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 109596 8210 TEADIFHQA True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 38.366 2 0.1844282600327932 0.0004893964110929853 0.0013670481534458735 ['ENSG00000147251|ENST00000276202|DOCK11'] 72304 9748 MIEPRTLQY True H1975_Epitope_Rep2 1149.58523001761 1149.5841299358601 42.484 2 0.1844275624525195 0.0004893964110929853 0.0013670701366275714 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 112614 8112 TLETVPLER True H1975_Epitope_Rep1 1056.5815245361598 1056.5804299358601 36.147 2 0.18441785777389746 0.0004893964110929853 0.0013673760015737975 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 65379 10749 LREDSTVSL True PC9_epitope_Rep1 1018.5294889633 1018.52838993586 46.234 2 0.18441722837604743 0.0004893964110929853 0.00136739584084213 ['ENSG00000120875|ENST00000240100|DUSP4'] 6755 15813 AQDEHLITF True PC9_epitope_Rep4 1072.5189242796 1072.5178299358602 68.749 2 0.18441040815917928 0.0004893964110929853 0.0013676108396032357 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 120523 16557 VEFLEPLEA True H1975_Epitope_Rep2 1045.5331773614098 1045.53267496793 68.912 1 0.18440535526629384 0.0004893964110929853 0.0013677701475477118 ['ENSG00000122965|ENST00000261741|RBM19'] 71046 16068 LYKDVRDLL True PC9_epitope_Rep4 1133.6444591458899 1133.6433699358602 69.739 2 0.18440113248178716 0.0004893964110929853 0.001367903298046993 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 96201 12857 RYPSNLQLF True NCI_RA007_Epitope_Rep4 1136.59784330664 1136.59674993586 56.537 2 0.18439222604200606 0.0004893964110929853 0.0013681841735661026 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 56860 19347 LDPHLVLDQLR True PC9_epitope_Rep2 1317.7404847890498 1317.7393899358601 79.793 2 0.18438977409080193 0.0004893964110929853 0.0013682615090062902 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 13394 11677 DLYLENPEIK True NCI_RA007_Epitope_Rep2 1232.6288686514001 1232.6277699358602 50.016 2 0.18438770475655605 0.0004893964110929853 0.0013683267799764413 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 140356 12500 YRDPTTVTTL True PC9_epitope_Rep2 1165.59790287629 1165.5968099358602 53.391 2 0.18438007933750336 0.0004893964110929853 0.0013685673279921714 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 135117 10083 WEEETVPTTA True H1975_Epitope_Rep3 1161.51898384925 1161.51788993586 43.823 2 0.18437865590655145 0.0004893964110929853 0.0013686122355944653 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 9471 8220 AVVIVDDR True PC9_epitope_Rep3 885.4919812557699 885.49088993586 36.597 2 0.18437726170466356 0.0004893964110929853 0.0013686562224853268 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 78514 20790 NYPETLGRLLI True PC9_epitope_Rep2 1287.7186867153098 1287.7175899358601 85.41 2 0.18437411366856074 0.0004893964110929853 0.0013687555478327554 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 41114 12902 HTVEDLVKV True PC9_epitope_Rep5 1038.5709598524597 1038.5698699358602 54.64 2 0.18436793383544975 0.0004893964110929853 0.0013689505520192496 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 93331 12543 RPTEVLAGTQL True PC9_epitope_Rep4 1183.6560864587498 1183.6549899358602 56.066 2 0.18436351025465664 0.0004893964110929853 0.001369090154890595 ['ENSG00000101255|ENST00000217233|TRIB3'] 37905 7045 GYSFTTTAER True NCI_RA007_Epitope_Rep4 1131.51965255559 1131.5185499358602 33.725 2 0.18434951151148973 0.0004893964110929853 0.0013695320323643908 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 14102 21162 DRYQYPFVL True PC9_epitope_Rep3 1199.5975089534697 1199.59640993586 86.686 2 0.18434945935546448 0.0004893964110929853 0.0013695336789632006 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 9838 17811 AYLEAYKEF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 73.529 2 0.18434903414092008 0.0004893964110929853 0.0013695471033302092 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 127395 8560 VNELTEFAK True H1975_Epitope_Rep1 1049.53932537101 1049.53822993586 37.852 2 0.18434720517911693 0.0004893964110929853 0.0013696048466369755 ['CON__P02769'] 82660 23148 PQPDVFPLF True PC9_epitope_Rep3 1058.54368247546 1058.5425899358602 94.308 2 0.18434462873865076 0.0004893964110929853 0.0013696861932040018 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 43937 20173 IIDGKIFCV True PC9_epitope_Rep5 1006.5521389841799 1006.55104993586 82.643 2 0.18431528674554734 0.0004893964110929853 0.0013706129566097812 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 54614 8454 KYLDNPNAL True NCI_RA007_Epitope_Rep1 1046.53965972418 1046.53856993586 36.883 2 0.18430668385580287 0.0004893964110929853 0.0013708847970038873 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 89203 9183 QVTDFGFAK True NCI_RA007_Epitope_Rep3 1011.5025459394698 1011.50144993586 43.211 2 0.18429780777985652 0.0004893964110929853 0.0013711653263752286 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'ENST00000536649.5_1_19:14208073-14223129:-|nuORF', 'nc|ENSG00000142875|P22694-10|PRKACB', 'nc|ENSG00000142875|P22694-4|PRKACB', 'nc|ENSG00000142875|P22694-3|PRKACB', 'nc|ENSG00000142875|P22694|PRKACB', 'nc|ENSG00000142875|P22694-5|PRKACB', 'nc|ENSG00000142875|P22694-7|PRKACB', 'nc|ENSG00000142875|P22694-6|PRKACB', 'nc|ENSG00000142875|P22694-9|PRKACB', 'ENST00000587533.1_1_19:14208360-14208546:-|nuORF', 'nc|ENSG00000142875|P22694-8|PRKACB', 'ENSG00000165059|ENST00000377276|PRKACG', 'ENSG00000142875|ENST00000370685|PRKACB'] 70893 17778 LYEKDIQLF True PC9_epitope_Rep6 1167.6175756917098 1167.61646993586 81.018 2 0.1842897316173137 0.0004893964110929853 0.0013714206243866044 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 142134 20488 YVQDFLNHL True PC9_epitope_Rep3 1147.56620882519 1147.5651099358602 84.065 2 0.18428909494620815 0.0004893964110929853 0.0013714407524149008 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 49479 18102 KFAEEFYSF True PC9_epitope_Rep6 1166.5284263341398 1166.52732993586 82.266 2 0.18428096173126843 0.0004893964110929853 0.0013716979058582906 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 324 19293 AAIDWFDGK True PC9_epitope_Rep5 1021.4868958753299 1021.48578993586 79.254 2 0.18427761731962086 0.0004893964110929853 0.0013718036624402713 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 22457 15269 ETEVYEGALLY True H1975_Epitope_Rep1 1285.6077988536497 1285.6067099358602 64.0 2 0.18427731617200607 0.0004893964110929853 0.0013718131856949056 ['nc|ENSG00000099910|Q53GT1-3|KLHL22', 'ENSG00000099910|ENST00000328879|KLHL22'] 118688 12677 TYTDVTPRQF True PC9_epitope_Rep2 1226.59315184902 1226.5920499358601 54.07 2 0.18427649886202238 0.0004893964110929853 0.0013718390319951209 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 78387 22248 NYLDRFLSL True PC9_epitope_Rep1 1139.59750895347 1139.59640993586 90.394 2 0.18426531752429504 0.0004893964110929853 0.0013721926753859815 ['ENSG00000110092|ENST00000227507|CCND1'] 20071 11635 EMEEKYYRF True PC9_epitope_Rep2 1293.5699738762899 1293.56833490379 50.081 3 0.18426267099952096 0.0004893964110929853 0.001372276393053501 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 108930 11057 TADHNLLLYE True H1975_Epitope_Rep2 1187.58225281215 1187.5811499358601 47.561 2 0.18426202189370072 0.0004893964110929853 0.0013722969270363028 ['ENSG00000183751|ENST00000568546|TBL3'] 129312 19337 VQWENSFVSV True PC9_epitope_Rep6 1193.57168812845 1193.5705899358602 87.028 2 0.18425964488588426 0.0004893964110929853 0.0013723721245502702 ['ENSG00000174231|ENST00000304992|PRPF8'] 109826 5611 TEEKFIVKA True H1975_Epitope_Rep1 1063.5913609438699 1063.59026993586 26.649 2 0.18425531172179527 0.0004893964110929853 0.001372509216412084 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 104318 22146 SQIPFPLSL True PC9_epitope_Rep4 1000.5593325396 1000.55822993586 93.402 2 0.18424991021166023 0.0004893964110929853 0.0013726801276323472 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 23079 17998 EVIKELAQI True PC9_epitope_Rep1 1041.6070110080097 1041.6059099358602 74.023 2 0.18424041896062893 0.0004893964110929853 0.001372980495560867 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 92589 6184 RMQKEITAL True NCI_RA007_Epitope_Rep4 1088.60121443492 1088.60010993586 30.397 2 0.18423894927695184 0.0004893964110929853 0.001373027012267783 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 92818 13421 RPAQPTLWTA True PC9_epitope_Rep2 1139.60874234351 1139.60764993586 56.907 2 0.18422632182618065 0.0004893964110929853 0.0013734267466494199 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 115546 5000 TRSITNTTV True PC9_epitope_Rep4 991.52982331647 991.52872993586 25.85 2 0.18422284262700372 0.0004893964110929853 0.001373536904618336 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 21199 10775 ERDMSNVSL True PC9_epitope_Rep5 1049.48115887189 1049.48006993586 46.437 2 0.1842208718497774 0.0004893964110929853 0.0013735993070489734 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 141776 12551 YVAPKAVWL True H1975_Epitope_Rep2 1045.59605240149 1045.59494993586 53.372 2 0.1842199811856584 0.0004893964110929853 0.001373627509852648 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000472057.1_1_22:29727525-29736761:-|nuORF', 'ENST00000441188.2_1_X:92477682-92478501:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1'] 85206 9083 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 39.842 2 0.18421319516740658 0.0004893964110929853 0.0013738424076015522 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 43123 12392 IEYPTLHVV True H1975_Epitope_Rep2 1069.58079626017 1069.5796899358602 52.751 2 0.18420098077261524 0.0004893964110929853 0.0013742292945904777 ['nc|ENSG00000117174|Q9NWK9-2|ZNHIT6', 'ENSG00000117174|ENST00000370574|ZNHIT6'] 17722 12420 EHQAVLQSL True PC9_epitope_Rep3 1023.53490869691 1023.53380993586 52.802 2 0.1841985343420996 0.0004893964110929853 0.0013743067976078236 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 65818 6612 LSDKNIEQY True H1975_Epitope_Rep1 1108.540053647 1108.53894993586 30.489 2 0.1841952968596231 0.0004893964110929853 0.0013744093679180106 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 7467 5299 ASATVAIPK True NCI_RA007_Epitope_Rep3 856.50181766348 856.50072993586 27.855 2 0.18419527064722946 0.0004893964110929853 0.0013744101984135392 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 131061 6292 VTDSIRDEY True H1975_Epitope_Rep2 1096.5036681382799 1096.50256993586 29.139 2 0.18419403402467685 0.0004893964110929853 0.0013744493792871525 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 21494 20532 ERLLGNFSL True PC9_epitope_Rep5 1047.57129420563 1047.57018993586 84.018 2 0.18419182330318598 0.0004893964110929853 0.0013745194260842012 ['ENSG00000151012|ENST00000280612|SLC7A11'] 32256 18795 GFAFVQYVNER True PC9_epitope_Rep4 1328.65133543148 1328.6502299358601 80.381 2 0.18418554717529106 0.0004893964110929853 0.0013747183049403696 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant'] 114088 4589 TPFQGQGHGA True PC9_epitope_Rep5 998.4569927293797 998.45588993586 22.712 2 0.18417120081833055 0.0004893964110929853 0.0013751730227124347 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 40793 19329 HRYEFLETL True PC9_epitope_Rep5 1206.6033226098998 1206.6022299358601 79.394 2 0.18416790962629875 0.0004893964110929853 0.001375277360592075 ['ENSG00000163545|ENST00000367157|NUAK2'] 32647 10566 GGNFGFGDSR True PC9_epitope_Rep5 1012.4362572847999 1012.43516993586 45.631 2 0.18416526533793617 0.0004893964110929853 0.0013753611959796707 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 86043 10971 QHQSGIVQL True PC9_epitope_Rep3 1008.5352430500798 1008.53414993586 47.185 2 0.1841590145559299 0.0004893964110929853 0.001375559393193102 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 53326 17987 KQMEQISQFL True PC9_epitope_Rep4 1250.6329084860197 1250.63180993586 77.241 2 0.1841590106735707 0.0004893964110929853 0.0013755595163022368 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 89540 19565 QYLQDAYSF True PC9_epitope_Rep4 1133.5029398622898 1133.50184993586 83.379 2 0.18415682128730504 0.0004893964110929853 0.0013756289432326767 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 114415 15357 TPTPVPVV True PC9_epitope_Rep2 808.4694549060399 808.46890496793 64.353 1 0.18414789838782708 0.0004893964110929853 0.0013759119307817625 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 133599 17897 VYAALQRQLL True PC9_epitope_Rep1 1173.6869926642098 1173.6858899358601 73.633 2 0.18414562686473912 0.0004893964110929853 0.0013759839808913771 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 21120 13960 ERALQQYTL True PC9_epitope_Rep1 1120.5876725457601 1120.58656993586 58.533 2 0.18414199368201034 0.0004893964110929853 0.001376099229145815 ['ENSG00000181789|ENST00000314797|COPG1'] 40974 6232 HTDPDYSAAY True H1975_Epitope_Rep2 1138.45671794586 1138.45562993586 28.93 2 0.18414176830216802 0.0004893964110929853 0.0013761063787425198 ['ENST00000579053.5_1_18:691132-706776:-|nuORF', 'ENOSF1|p.G48Efs*22|1|0.27|ENSG00000132199|chr18:706520-706520|C/-|frameshift_variant', 'ENST00000580605.5_1_18:693172-712587:-|nuORF', 'ENST00000578651.5_1_18:683014-712587:-|nuORF', 'ENSG00000132199|ENST00000647584|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-4|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-5|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-3|ENOSF1'] 90320 6480 REFDNMAKV True NCI_RA007_Epitope_Rep4 1108.5335287979199 1108.5324299358601 31.522 2 0.18413909579447477 0.0004893964110929853 0.0013761911600240976 ['ENSG00000133142|ENST00000472484|TCEAL4', 'nc|ENSG00000133142|Q96EI5-2|TCEAL4'] 84930 15361 QEEDFVLQV True H1975_Epitope_Rep1 1105.5291546101298 1105.52804993586 64.355 2 0.18413716698982646 0.0004893964110929853 0.00137625235169926 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 61902 7324 LLDEHHISY True H1975_Epitope_Rep1 1125.54547338061 1125.54382490379 33.181 3 0.1841345867850677 0.0004893964110929853 0.0013763342134243957 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 141346 5116 YTDVSTRY True H1975_Epitope_Rep1 1003.46107505031 1003.45996993586 24.748 2 0.18412969160728596 0.0004893964110929853 0.0013764895353245222 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 72219 20609 MHDFNLISI True PC9_epitope_Rep2 1088.53246616876 1088.53136993586 84.706 2 0.18412108203568456 0.0004893964110929853 0.0013767627559765846 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 116722 11293 TVDGVVFHY True H1975_Epitope_Rep2 1035.50254593947 1035.5014499358601 48.485 2 0.18412100109165053 0.0004893964110929853 0.0013767653249548296 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant', 'nc|ENSG00000038427|P13611-4|VCAN'] 127285 12286 VMAPRTLLL True H1975_Epitope_Rep3 1012.6103225666399 1012.60922993586 52.436 2 0.18411853718097165 0.0004893964110929853 0.0013768435261354373 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENST00000463348.5_1_6:30227401-30227711:+|nuORF'] 107973 14374 SVYVQLEKV True PC9_epitope_Rep2 1063.5913609438699 1063.59026993586 60.55 2 0.18411542615295245 0.0004893964110929853 0.0013769422723014877 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 118641 18548 TYSPALNKMF True PC9_epitope_Rep5 1170.5743309807401 1170.5732299358601 76.368 2 0.18411108202093354 0.0004893964110929853 0.0013770801699113057 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 130996 10268 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.53352993586 44.44 2 0.1841069654471705 0.0004893964110929853 0.001377210856816528 ['ENSG00000197081|ENST00000356956|IGF2R'] 40519 7721 HRDYETATL True PC9_epitope_Rep3 1104.51998690876 1104.5188899358602 34.694 2 0.18410446238294015 0.0004893964110929853 0.0013772903264806216 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 97315 4978 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 24.231 2 0.1840995761398524 0.0004893964110929853 0.0013774454728173295 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 140727 13537 YSDAFLNDSY True H1975_Epitope_Rep1 1193.48768372097 1193.4871749679298 57.191 1 0.184090232397147 0.0004893964110929853 0.0013777422009486194 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 127531 12475 VNQIGSVTESL True NCI_RA007_Epitope_Rep1 1145.59281749585 1145.59172993586 52.503 2 0.18408803857770156 0.0004893964110929853 0.0013778118790994758 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 140776 7054 YSDGYGRVY True H1975_Epitope_Rep3 1078.47197408718 1078.47086993586 32.098 2 0.18408785858406387 0.0004893964110929853 0.001377817596054807 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 90608 9672 REMPGVWGA True H1975_Epitope_Rep2 1001.4752856458098 1001.47418993586 42.184 2 0.18407089685839562 0.0004893964110929853 0.0013783564408400414 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 134104 13183 VYKTIM[Oxidation]EQF True PC9_epitope_Rep5 1173.5739970080097 1173.57288993586 55.713 2 0.18406299421109687 0.0004893964110929853 0.001378607566443885 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 35146 8422 GQWKKGFVL True NCI_RA007_Epitope_Rep3 1061.6022004110898 1061.6011099358602 40.217 2 0.18406118147092976 0.0004893964110929853 0.0013786651770832665 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 63885 6765 LNNELLAK True NCI_RA007_Epitope_Rep1 913.5232813840499 913.52218993586 30.323 2 0.18405820706124426 0.0004893964110929853 0.0013787597119337097 ['CON__P34955'] 9079 9234 AVIGADSVTLK True NCI_RA007_Epitope_Rep2 1072.61282466444 1072.61172993586 40.529 2 0.1840569030157397 0.0004893964110929853 0.0013788011601042884 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 43811 9887 IHSENFQTL True PC9_epitope_Rep6 1087.5298233164701 1087.5287299358602 48.531 2 0.18405594629683994 0.0004893964110929853 0.0013788315695368433 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 94965 16091 RTLETLIRL True PC9_epitope_Rep4 1113.6869926642098 1113.6858899358601 69.831 2 0.1840496079081844 0.0004893964110929853 0.0013790330530102325 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 64789 20398 LQAPPLTSL True PC9_epitope_Rep5 938.5436824754601 938.54258993586 83.498 2 0.1840359344585414 0.0004893964110929853 0.0013794678024809446 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 109845 14304 TEELPQLINA True H1975_Epitope_Rep2 1126.5870038394198 1126.5859099358602 60.17 2 0.1840326282144911 0.0004893964110929853 0.0013795729456497006 ['ENSG00000139684|ENST00000378720|ESD'] 140315 13601 YRDGLVEQL True PC9_epitope_Rep4 1091.56112344475 1091.56002993586 60.208 2 0.1840296771383784 0.0004893964110929853 0.0013796668007672445 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF'] 42437 9159 IEDTRYTLP True H1975_Epitope_Rep1 1106.56078909158 1106.5596899358602 40.137 2 0.184024942061475 0.0004893964110929853 0.001379817407069749 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 105110 7327 SREPSQMEM True PC9_epitope_Rep5 1093.4532298718898 1093.45212993586 33.143 2 0.1840240452577037 0.0004893964110929853 0.0013798459331297239 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 89654 12747 QYTQALEKF True PC9_epitope_Rep4 1126.5658744720197 1126.56476993586 56.892 2 0.18402164053394876 0.0004893964110929853 0.0013799224269097762 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 57572 6535 LEDSVIRQA True H1975_Epitope_Rep2 1029.5454733806098 1029.54436993586 30.048 2 0.18402154182493524 0.0004893964110929853 0.0013799255669144953 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'PIGG|p.A141S|1|0.16|ENSG00000174227|chr4:505778-505778|G/T|missense_variant', 'nc|ENSG00000174227|Q5H8A4-5|PIGG', 'nc|ENSG00000174227|Q5H8A4-6|PIGG'] 94966 18151 RTLETLIRL True PC9_epitope_Rep5 1113.6869926642098 1113.6858899358601 74.826 2 0.18402099876683425 0.0004893964110929853 0.0013799428421113738 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 77123 12043 NRMPDQISV True PC9_epitope_Rep5 1058.51787873378 1058.51678993586 51.317 2 0.18400376688774917 0.0004893964110929853 0.0013804911172191838 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1'] 54679 19318 KYLSVQGQLF True PC9_epitope_Rep5 1181.64445914589 1181.6433699358602 79.351 2 0.18400027780211436 0.0004893964110929853 0.0013806021577362742 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 22246 11277 ESYSVYVYK True PC9_epitope_Rep6 1136.5389910178399 1136.5378899358602 54.39 2 0.18399540892294802 0.0004893964110929853 0.0013807571252895422 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 115073 16248 TRDELEWKL True PC9_epitope_Rep1 1188.6138872935999 1188.61278993586 67.316 2 0.18399055347870844 0.0004893964110929853 0.0013809116825952814 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 4232 13780 AIDLFTDAIK True H1975_Epitope_Rep1 1105.60192562757 1105.60082993586 58.147 2 0.18399022889335642 0.0004893964110929853 0.0013809220153346007 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4', 'ENST00000456632.1_1_X:92543289-92543514:-|nuORF', 'nc|ENSG00000212789|Q8NFI4|ST13P5'] 97721 13841 SEIEVTPSVL True H1975_Epitope_Rep2 1072.56520576568 1072.5641099358602 58.386 2 0.1839875023832574 0.0004893964110929853 0.0013810088131859088 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3', 'nc|ENSG00000148498|Q8TEW0-9|PARD3', 'nc|ENSG00000148498|Q8TEW0-10|PARD3', 'nc|ENSG00000148498|Q8TEW0-8|PARD3'] 90688 6868 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 31.336 2 0.18398496328337854 0.0004893964110929853 0.0013810896497910667 ['ENSG00000129250|ENST00000320785|KIF1C'] 118913 10310 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47587496793 44.663 1 0.18398177484086717 0.0004893964110929853 0.0013811911660508095 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 138371 12932 YHGAEIVSL True PC9_epitope_Rep6 987.50254593947 987.50144993586 61.285 2 0.18398078771463686 0.0004893964110929853 0.001381222596505135 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 134266 19528 VYNEQIRDLL True PC9_epitope_Rep1 1261.6666511424498 1261.66554993586 79.936 2 0.18397921607193662 0.0004893964110929853 0.0013812726396533984 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF'] 128426 7087 VPRQPTVTSV True PC9_epitope_Rep6 1082.60840799034 1082.60730993586 36.297 2 0.1839781177871508 0.0004893964110929853 0.0013813076115484816 ['ENSG00000163110|ENST00000317968|PDLIM5'] 66105 10177 LSELEAALQR True H1975_Epitope_Rep1 1128.6138872935999 1128.61278993586 44.085 2 0.18397174353577306 0.0004893964110929853 0.0013815105997878026 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 137519 6263 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 29.103 1 0.18397094971573555 0.0004893964110929853 0.0013815358811057022 ['ENSG00000127184|ENST00000247655|COX7C'] 115601 7193 TRTSQMQEL True PC9_epitope_Rep1 1092.52335803704 1092.52226993586 32.481 2 0.18396689866745125 0.0004893964110929853 0.0013816649047722707 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 140953 12466 YSEYLYQEQY True H1975_Epitope_Rep2 1384.5823123818 1384.5812099358602 53.039 2 0.18396355467785672 0.0004893964110929853 0.0013817714181062492 ['ENST00000557184.1_1_14:54976944-54997777:+|nuORF', 'ENSG00000100532|ENST00000216420|CGRRF1'] 8117 13759 ATEEAPYWTY True H1975_Epitope_Rep1 1229.5240692296898 1229.5229699358601 58.066 2 0.18395971529988034 0.0004893964110929853 0.0013818937207852892 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 20834 12485 EQISDIDDAVR True PC9_epitope_Rep2 1259.59935942827 1259.5982699358601 53.333 2 0.18395889340537327 0.0004893964110929853 0.0013819199034934423 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 24156 5995 EYQELM[Oxidation]NVK True H1975_Epitope_Rep3 1168.5434251557197 1168.5423299358602 28.072 2 0.1839566520519082 0.0004893964110929853 0.0013819913077672053 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 137987 21965 YFQNTQGLIF True PC9_epitope_Rep1 1229.6080736371698 1229.6069699358602 89.307 2 0.18395544337440373 0.0004893964110929853 0.0013820298149373415 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 106252 15132 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.5586299358602 63.462 2 0.18395278210566038 0.0004893964110929853 0.0013821146038983882 ['ENSG00000131459|ENST00000253778|GFPT2'] 134910 10334 VYVVGTAHF True NCI_RA007_Epitope_Rep4 991.5127167003499 991.51160993586 46.607 2 0.18395197659073392 0.0004893964110929853 0.001382140268915969 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 43721 11972 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 51.073 2 0.18394875879474723 0.0004893964110929853 0.0013822427979025378 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 125030 6838 VIDDTNITR True PC9_epitope_Rep2 1045.5403880001702 1045.53928993586 31.707 2 0.18394275061759618 0.0004893964110929853 0.0013824342575152594 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 910 4024 ADLSEAANR True NCI_RA007_Epitope_Rep2 945.4515729957699 945.45046993586 20.29 2 0.18392625556737113 0.0004893964110929853 0.0013829600337983026 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 125192 19994 VIIDQLPDL True PC9_epitope_Rep6 1024.580461907 1024.57936993586 89.573 2 0.18391652918802756 0.0004893964110929853 0.0013832701540349218 ['ENSG00000070018|ENST00000261349|LRP6'] 108320 7858 SYISRTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 39.628 2 0.18391639132996326 0.0004893964110929853 0.001383274550064118 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 106274 8573 STETHEELLY True H1975_Epitope_Rep3 1220.55609763396 1220.5550099358602 37.967 2 0.1839123405957027 0.0004893964110929853 0.0013834037264589057 ['ENSG00000110717|ENST00000313468|NDUFS8'] 121641 13089 VFIDKQTNL True PC9_epitope_Rep3 1076.5866099166 1076.58550993586 55.37 2 0.18391206455416625 0.0004893964110929853 0.0013834125297598784 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 121410 11385 VEVTEFEDIK True NCI_RA007_Epitope_Rep1 1207.59723416995 1207.59612993586 48.258 2 0.18391109549222245 0.0004893964110929853 0.001383443434770658 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 92369 19076 RLPETLPSL True PC9_epitope_Rep3 1024.59169529704 1024.5905899358602 78.599 2 0.18390614196856025 0.0004893964110929853 0.001383601421757772 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 18076 5983 EIGQSVDEVEK True NCI_RA007_Epitope_Rep5 1231.5932114186696 1231.5921099358602 29.696 2 0.18387792579256906 0.0004893964110929853 0.0013845016894249993 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 99490 7071 SIDDLEEK True PC9_epitope_Rep2 947.44475627983 947.44364993586 32.596 2 0.18387422397696063 0.0004893964110929853 0.0013846198434190585 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 111146 18452 THFLQPIYL True PC9_epitope_Rep6 1130.6124307416198 1130.61132993586 83.617 2 0.18387378881681352 0.0004893964110929853 0.0013846337334590163 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 90443 8127 REIQEAIAVA True NCI_RA007_Epitope_Rep5 1098.6033226098998 1098.6022299358601 37.945 2 0.1838727602725255 0.0004893964110929853 0.0013846665645050734 ['ENSG00000198218|ENST00000395443|QRICH1'] 28668 11002 FSNPRALYL True H1975_Epitope_Rep3 1079.5763795860698 1079.5752899358602 47.408 2 0.18387237405447657 0.0004893964110929853 0.0013846788927537803 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 76380 13988 NQAKYIPEL True PC9_epitope_Rep4 1074.57095985246 1074.5698699358602 61.71 2 0.18386963706200857 0.0004893964110929853 0.0013847662619003154 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 135399 18435 WHEDITQDL True PC9_epitope_Rep1 1155.5196525555898 1155.5185499358602 75.7 2 0.18386885899462618 0.0004893964110929853 0.0013847911000554804 ['ENSG00000100393|ENST00000263253|EP300'] 24165 6743 EYQELM[Oxidation]SVK True NCI_RA007_Epitope_Rep1 1141.5325261188498 1141.5314299358602 30.238 2 0.18386695357954888 0.0004893964110929853 0.0013848519282865378 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'KRT4|p.R420H|1|0.19|ENSG00000170477|chr12:52807731-52807731|C/T|missense_variant', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 137148 14628 YAVEGRDLTL True PC9_epitope_Rep6 1135.5873381925899 1135.58624993586 68.184 2 0.1838533789005523 0.0004893964110929853 0.0013852853621355264 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 40286 11471 HQLSQLQAL True PC9_epitope_Rep6 1036.5665431783598 1036.5654499358602 55.191 2 0.18385205286798906 0.0004893964110929853 0.001385327709091875 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 76406 13407 NQDDSILKV True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 56.587 2 0.18385001114773317 0.0004893964110929853 0.0013853929141288907 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 104900 11388 SRDDNM[Oxidation]FQI True PC9_epitope_Rep4 1140.48697290876 1140.4858699358601 51.575 2 0.18384963240486094 0.0004893964110929853 0.0013854050101217105 ['ENSG00000113387|ENST00000265073|SUB1'] 29164 12377 FTQGHIVEV True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 52.467 2 0.18384665437935882 0.0004893964110929853 0.001385500123652905 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 93600 7834 RQPDSGISSI True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 37.543 2 0.18384168977290216 0.0004893964110929853 0.0013856587000585622 ['ENSG00000163902|ENST00000296255|RPN1'] 141869 15494 YVDPQFLTY True H1975_Epitope_Rep3 1144.54407639828 1144.54357496793 65.014 1 0.18384096376575726 0.0004893964110929853 0.0013856818912567183 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 1959 6042 AEIPAGPGREP True H1975_Epitope_Rep1 1092.55637241748 1092.55526993586 28.314 2 0.1838385305820921 0.0004893964110929853 0.001385759618458668 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF', 'ENST00000486701.1_1_2:27663271-27663376:+|nuORF'] 53864 18454 KTIEDTLMTV True PC9_epitope_Rep4 1149.59512599497 1149.5940299358601 79.053 2 0.18383189522364773 0.0004893964110929853 0.00138597160487264 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 139123 21278 YLDPSVLSGV True PC9_epitope_Rep3 1048.54407639828 1048.5429699358601 87.141 2 0.1838089406396219 0.0004893964110929853 0.001386705208594414 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 136870 9569 YADVGGKQF True PC9_epitope_Rep5 983.47124581119 983.47014993586 41.768 2 0.18380785505593458 0.0004893964110929853 0.0013867399123130403 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 102662 19060 SLYGQFRVV True PC9_epitope_Rep1 1067.5763795860698 1067.5752899358602 78.105 2 0.1838062187069932 0.0004893964110929853 0.0013867922244282373 ['ENSG00000119820|ENST00000238831|YIPF4'] 24033 19660 EYNNIFHTF True PC9_epitope_Rep2 1183.52982331647 1183.5287299358602 81.007 2 0.1837999759902451 0.0004893964110929853 0.0013869918147696285 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 44083 21582 IIMLEALERV True PC9_epitope_Rep1 1185.67913040245 1185.6780299358602 87.838 2 0.18379931312952158 0.0004893964110929853 0.0013870130092524114 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 128662 7505 VPVLAENYK True H1975_Epitope_Rep1 1031.56514619603 1031.56404993586 33.866 2 0.18379847396054508 0.0004893964110929853 0.0013870398415271436 ['CON__Q29443', 'CON__Q0IIK2', 'nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 17829 8123 EHTNAIGTL True PC9_epitope_Rep2 954.4770594676199 954.47596993586 36.603 2 0.18379488123523263 0.0004893964110929853 0.0013871547241443671 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 49206 4738 KEMPVKVEA True NCI_RA007_Epitope_Rep4 1029.5528672601697 1029.5517699358602 24.659 2 0.18379472117703957 0.0004893964110929853 0.0013871598424597712 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 28557 9365 FSEQVAM[Oxidation]GY True H1975_Epitope_Rep2 1046.4378974580197 1046.4367899358601 40.984 2 0.18379469243531496 0.0004893964110929853 0.0013871607615600651 ['ENSG00000179051|ENST00000375436|RCC2'] 96124 14522 RYNPNLNTW True PC9_epitope_Rep1 1176.5676058075198 1176.56650993586 60.684 2 0.1837889438535742 0.0004893964110929853 0.0013873446014616203 ['ENSG00000178502|ENST00000319121|KLHL11'] 134548 15894 VYRTVIEYY True PC9_epitope_Rep2 1204.6128246644398 1204.61172993586 66.389 2 0.18377337253851497 0.0004893964110929853 0.001387842695478214 ['ENSG00000173418|ENST00000334982|NAA20'] 15027 16840 DYLEVAKHF True PC9_epitope_Rep5 1120.55530978832 1120.5542099358602 69.785 2 0.1837723896014145 0.0004893964110929853 0.0013878741436071618 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.L126Pfs*6|1|0.29|ENSG00000128272|chr22:39521916-39521917|-/C|frameshift_variant'] 111072 11401 THDLEGPPL True PC9_epitope_Rep2 977.4818104948899 977.48070993586 49.176 2 0.18377011863912354 0.0004893964110929853 0.0013879468035968398 ['ENSG00000169564|ENST00000303577|PCBP1'] 28670 19445 FSPAGPILSIR True PC9_epitope_Rep1 1156.6604435632 1156.65934993586 79.609 2 0.18376941259091992 0.0004893964110929853 0.0013879693945573902 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 55042 17203 KYSNMEQSLF True PC9_epitope_Rep1 1245.5699738762899 1245.5688699358602 70.99 2 0.18376001740294612 0.0004893964110929853 0.001388270041296423 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 35144 8230 GQWKKGFVL True NCI_RA007_Epitope_Rep3 1061.6022004110898 1061.6011099358602 39.509 2 0.18374835116439325 0.0004893964110929853 0.0013886434526713038 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 73824 17414 NALDKVLSV True PC9_epitope_Rep4 957.54949613189 957.54838993586 74.976 2 0.1837434475963279 0.0004893964110929853 0.0013888004354561218 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 90930 9947 REYQELMNV True NCI_RA007_Epitope_Rep4 1180.55465816532 1180.5535699358602 45.106 2 0.1837422781456084 0.0004893964110929853 0.0013888378768677984 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 71907 15773 MEQISQFLQA True H1975_Epitope_Rep2 1193.57505925673 1193.57396993586 65.85 2 0.18373921288186568 0.0004893964110929853 0.0013889360198800545 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.Q89H|1|0.32|ENSG00000158710|chr1:159919749-159919749|C/G|missense_variant'] 38576 5629 HEVKDNYIP True H1975_Epitope_Rep3 1113.5454733806098 1113.54436993586 26.689 2 0.18373564485558755 0.0004893964110929853 0.001389050268998846 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 8849 6428 AVFDGAQVTSK True NCI_RA007_Epitope_Rep3 1121.57168812845 1121.5705899358602 32.299 2 0.1837217254565996 0.0004893964110929853 0.0013894960617839185 ['ENSG00000175274|ENST00000525680|TP53I11'] 115034 14425 TRDAGYGGLSL True PC9_epitope_Rep2 1108.5512870370399 1108.55018993586 60.755 2 0.18371915977509995 0.0004893964110929853 0.0013895782478132504 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 109705 12759 TEDGDSFLHLA True H1975_Epitope_Rep2 1203.54078192299 1203.53968993586 54.181 2 0.18371167015954354 0.0004893964110929853 0.0013898181892363379 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 75282 20205 NIIPRFVQV True PC9_epitope_Rep1 1084.6393141958001 1084.63820993586 82.547 2 0.18370969837330184 0.0004893964110929853 0.0013898813653642247 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 115140 9133 TRDEVDATL True PC9_epitope_Rep3 1018.4931034545799 1018.49200993586 40.068 2 0.18370242390809655 0.0004893964110929853 0.0013901144644833687 ['DSCC1|p.C98Lfs*7|1|0.32|ENSG00000136982|chr8:119853105-119853105|C/-|frameshift_variant', 'ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 137479 7460 YEEDSYSHIM[Oxidation]A True H1975_Epitope_Rep1 1359.52889729039 1359.52778993586 33.692 2 0.18369160112140243 0.0004893964110929853 0.00139046133665211 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 41438 16318 HYILHNSFF True PC9_epitope_Rep4 1176.5716285587998 1176.5705299358601 70.729 2 0.18368945206608317 0.0004893964110929853 0.0013905302245655674 ['ENSG00000163659|ENST00000295924|TIPARP'] 78512 15480 NYPETLGRLLI True NCI_RA007_Epitope_Rep5 1287.7186867153098 1287.7175899358601 66.239 2 0.18368896922217517 0.0004893964110929853 0.001390545702585311 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 124934 15259 VHSEQVFAL True PC9_epitope_Rep2 1028.5290950404797 1028.5279899358602 63.969 2 0.18367520874524737 0.0004893964110929853 0.0013909868803211294 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 84328 11001 PYTKVEESF True PC9_epitope_Rep2 1098.5233409536997 1098.5222499358601 47.636 2 0.18367279076426407 0.0004893964110929853 0.0013910644182413819 ['ENSG00000182858|ENST00000330817|ALG12'] 93322 6874 RPSPPVQSV True PC9_epitope_Rep5 965.52942939365 965.52832993586 31.411 2 0.18366141626270785 0.0004893964110929853 0.0013914292249700136 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 77381 9259 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.46057496793 40.571 1 0.1836586803576799 0.0004893964110929853 0.0013915169861137007 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 87948 20467 QRLINLVGESL True PC9_epitope_Rep5 1240.7139356880398 1240.71282993586 83.763 2 0.1836584032671694 0.0004893964110929853 0.0013915258748091353 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 140367 11823 YRDPYTGQSV True PC9_epitope_Rep1 1184.5462016566 1184.5451099358602 50.343 2 0.18365783519649975 0.0004893964110929853 0.0013915440979394018 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 21649 14563 ERSDLEYQL True PC9_epitope_Rep3 1151.54586730343 1151.5447699358601 61.145 2 0.18365227357313085 0.0004893964110929853 0.0013917225218038737 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 24328 10654 EYVKQTWNL True NCI_RA007_Epitope_Rep4 1179.59242357303 1179.5913299358601 47.83 2 0.18365155257508545 0.0004893964110929853 0.001391745654005728 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 70560 20896 LWAPRPFNL True PC9_epitope_Rep5 1112.61309944796 1112.6120099358602 85.431 2 0.18364901287775018 0.0004893964110929853 0.0013918271396696402 ['ENSG00000174231|ENST00000304992|PRPF8'] 111013 9236 THDDSHLVSL True PC9_epitope_Rep2 1122.5305515924601 1122.5289149037899 40.865 3 0.18364568334108294 0.0004893964110929853 0.0013919339744086071 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 100850 9736 SLEPVAVELK True NCI_RA007_Epitope_Rep3 1083.6175756917098 1083.61646993586 45.365 2 0.18364567390589925 0.0004893964110929853 0.001391934277166729 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 136773 18941 WYQTKFETL True PC9_epitope_Rep5 1214.5971746002997 1214.5966749679299 77.881 1 0.18364066542996288 0.0004893964110929853 0.0013920949994929387 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 24594 22739 FAIDPHLLLSV True PC9_epitope_Rep1 1223.69140933831 1223.6903099358601 92.27 2 0.18364054254622758 0.0004893964110929853 0.0013920989430739443 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 22738 10818 ETTFLVDKY True H1975_Epitope_Rep2 1114.5546410819798 1114.55354993586 46.64 2 0.18363023972384776 0.0004893964110929853 0.0013924296207536641 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 24290 16669 EYTPRSWNF True PC9_epitope_Rep4 1198.54072235334 1198.5396299358601 72.091 2 0.18362971384595675 0.0004893964110929853 0.001392446501354804 ['ENSG00000156671|ENST00000542569|SAMD8'] 26957 11921 FLDTNETPY True H1975_Epitope_Rep1 1098.48695544498 1098.4858499358602 50.855 2 0.18362695595479878 0.0004893964110929853 0.0013925350326041558 ['ENSG00000079246|ENST00000392132|XRCC5'] 72254 16800 MHNEEPFAL True PC9_epitope_Rep3 1086.4804305958999 1086.47932993586 69.768 2 0.18362273291924228 0.0004893964110929853 0.001392670607485239 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 105567 16059 SSDGAISLLTY True H1975_Epitope_Rep2 1125.55536935797 1125.55426993586 66.974 2 0.1836144105344392 0.0004893964110929853 0.0013929378251889754 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 98617 13428 SFVNDIFER True H1975_Epitope_Rep3 1125.5454733806098 1125.54436993586 56.921 2 0.18361218089491654 0.0004893964110929853 0.0013930094238710751 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 118152 16971 TYIPVPAKI True PC9_epitope_Rep1 1000.5957180483199 1000.59462993586 70.103 2 0.18360737247009792 0.0004893964110929853 0.0013931638456370192 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 96008 17147 RYLNEFEEL True PC9_epitope_Rep6 1211.5822528121498 1211.5811499358601 78.542 2 0.18359953105549046 0.0004893964110929853 0.0013934157081700194 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 93527 17823 RQLEEEGITFV True PC9_epitope_Rep2 1319.6721304457096 1319.6710299358601 73.851 2 0.18359016372280515 0.0004893964110929853 0.0013937166422899566 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 20041 13013 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep1 1154.4801561928198 1154.47904993586 55.137 2 0.1835873981462899 0.0004893964110929853 0.0013938055014154852 ['ENSG00000182195|ENST00000370526|LDOC1'] 57661 4866 LEEERTPTP True H1975_Epitope_Rep2 1070.52440358286 1070.5233099358602 23.804 2 0.18357595617262962 0.0004893964110929853 0.0013941731971405808 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 42346 6637 IEANEALVK True NCI_RA007_Epitope_Rep2 985.5444107514498 985.54330993586 30.428 2 0.1835714826916677 0.0004893964110929853 0.0013943169819735943 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF'] 119420 12791 VAQLEQVYIR True PC9_epitope_Rep6 1217.6768219033297 1217.67572993586 60.698 2 0.18355896453645537 0.0004893964110929853 0.001394719414490201 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 142603 15344 YYLTPDGQRF True PC9_epitope_Rep4 1258.59823722946 1258.5971499358602 66.954 2 0.1835304568906651 0.0004893964110929853 0.0013956363101553142 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 129688 11763 VRPPVQVY True PC9_epitope_Rep1 956.5443511817998 956.54324993586 50.12 2 0.18352437896897222 0.0004893964110929853 0.0013958318733729763 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 68205 5250 LTDTPKATSY True H1975_Epitope_Rep3 1095.54480467427 1095.54370993586 25.278 2 0.18351388918949424 0.0004893964110929853 0.0013961694571383906 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 40179 11903 HQELFPHSL True PC9_epitope_Rep4 1106.55089311422 1106.5497899358602 53.562 2 0.18351342223093742 0.0004893964110929853 0.0013961844867757395 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 33727 19474 GLIEILKKV True PC9_epitope_Rep2 1011.6692173417499 1011.66812993586 80.286 2 0.1835064596319273 0.0004893964110929853 0.0013964086058511334 ['ENSG00000105185|ENST00000590247|PDCD5'] 30356 13310 GAAVDEYFR True PC9_epitope_Rep1 1026.47705946762 1026.4759699358601 56.059 2 0.18350323495368817 0.0004893964110929853 0.0013965124172239235 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 25524 7404 FEIATKEDP True H1975_Epitope_Rep3 1048.5076908895599 1048.5065899358601 33.457 2 0.1835010791674644 0.0004893964110929853 0.0013965818222997895 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 140178 16180 YQTEIGQTL True PC9_epitope_Rep5 1051.51858992643 1051.51748993586 67.225 2 0.18350000057704838 0.0004893964110929853 0.0013966165485847532 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 45738 7894 IRYPDSHQL True PC9_epitope_Rep2 1127.57235683479 1127.57071490379 35.729 3 0.18349249311287916 0.0004893964110929853 0.0013968582827930361 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 138404 6515 YHGNTNPEL True PC9_epitope_Rep5 1043.46722305991 1043.4661299358602 30.032 2 0.18348609569538252 0.0004893964110929853 0.0013970643074970202 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 94921 10089 RTFEKIEEV True PC9_epitope_Rep5 1149.60298825673 1149.60188993586 43.79 2 0.18347488887299296 0.0004893964110929853 0.0013974252893877073 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 68167 6082 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 28.461 2 0.183472644910987 0.0004893964110929853 0.0013974975806664229 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 6655 18384 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 75.732 2 0.18346823151381106 0.0004893964110929853 0.0013976397732090864 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 116932 18851 TVFTDHMLTV True PC9_epitope_Rep4 1162.5692456002998 1162.5681499358602 80.596 2 0.18346139050236043 0.0004893964110929853 0.0013978602082277268 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 49075 5739 KEIEELQSQA True H1975_Epitope_Rep3 1173.58773211541 1173.5866299358602 27.102 2 0.18345747956303085 0.0004893964110929853 0.0013979862444251647 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 874 6522 ADGYVLEGK True NCI_RA007_Epitope_Rep2 950.4709114580198 950.46980993586 29.979 2 0.18345381338620023 0.0004893964110929853 0.001398104403106565 ['ENSG00000142937|ENST00000396651|RPS8'] 44464 14560 ILLAELEQLK True H1975_Epitope_Rep3 1168.7067250492798 1168.70562993586 61.372 2 0.18345369914133136 0.0004893964110929853 0.0013981080853110023 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 9907 18197 AYLLNLNHL True PC9_epitope_Rep6 1069.59202965021 1069.59092993586 82.635 2 0.18345253210777385 0.0004893964110929853 0.0013981457003023165 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 96646 6083 SAINEVVTR True NCI_RA007_Epitope_Rep5 987.53490869691 987.53380993586 30.08 2 0.18345124301039262 0.0004893964110929853 0.0013981872507464396 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 47903 15515 IYIKHPHLF True PC9_epitope_Rep3 1166.66004964038 1166.6584049037901 64.83 3 0.18344863029705258 0.0004893964110929853 0.0013982714680402877 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 8478 7043 ATQTQFFHVK True NCI_RA007_Epitope_Rep4 1205.61930702721 1205.61766490379 33.717 3 0.18343080320448057 0.0004893964110929853 0.0013988462360499916 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16', 'nc|ENSG00000163564|Q6K0P9-4|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-2|PYHIN1', 'ENST00000485134.1_1_1:158911778-158914889:+|nuORF', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1'] 141859 21628 YVDPLDPSF True PC9_epitope_Rep3 1051.48622716899 1051.4851299358602 88.491 2 0.18342957144219438 0.0004893964110929853 0.0013988859583682156 ['ENST00000472446.1_1_17:17412858-17494940:-|nuORF', 'nc|ENSG00000133027|Q9UBM1|PEMT', 'nc|ENSG00000133027|Q9UBM1-3|PEMT', 'ENSG00000133027|ENST00000255389|PEMT'] 43717 10402 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 45.334 2 0.1834274369773116 0.0004893964110929853 0.0013989547940448496 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 9760 16239 AYIERMNYI True PC9_epitope_Rep2 1171.5695799534699 1171.56848993586 67.708 2 0.18341946639032952 0.0004893964110929853 0.0013992118724368218 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 43722 9556 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 44.373 2 0.18341215459853558 0.0004893964110929853 0.0013994477440930969 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 92728 6608 RNVSTGDVNVE True PC9_epitope_Rep5 1188.5734790335998 1188.5723899358602 30.39 2 0.18341080967205617 0.0004893964110929853 0.0013994911345191706 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 134011 10267 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 44.44 3 0.18340668746193 0.0004893964110929853 0.0013996241349123783 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 107445 10450 SVLSPLLNK True NCI_RA007_Epitope_Rep3 969.5858816406101 969.58478993586 48.168 2 0.18340044707950426 0.0004893964110929853 0.0013998255008428947 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 34994 11991 GQTGKLMYV True PC9_epitope_Rep5 995.51100244819 995.50990993586 51.119 2 0.18339738814643142 0.0004893964110929853 0.0013999242177221236 ['ENSG00000124641|ENST00000265350|MED20', 'nc|ENSG00000288721|Q9H944-2|MED20'] 97257 12171 SEAEIFYNA True H1975_Epitope_Rep2 1042.46074069714 1042.4596499358602 51.899 2 0.18339557152834746 0.0004893964110929853 0.0013999828463237753 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 41058 4307 HTLNQIDSVK True NCI_RA007_Epitope_Rep5 1153.6091362663299 1153.60802993586 23.158 2 0.18339329048856864 0.0004893964110929853 0.0014000564669181864 ['CON__P12763'] 105438 7967 SRTSIQSEL True PC9_epitope_Rep2 1019.52473793603 1019.52364993586 36.009 2 0.1833915134082784 0.0004893964110929853 0.001400113824901094 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 25486 8169 FEFDTKTSA True NCI_RA007_Epitope_Rep4 1044.47639076128 1044.47528993586 38.211 2 0.18338920419167812 0.0004893964110929853 0.0014001883619152965 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 113055 10122 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1189.6376598937302 1189.63656993586 43.871 2 0.18338610586340132 0.0004893964110929853 0.0014002883761649663 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 8866 21844 AVFPDDMPTL True PC9_epitope_Rep2 1104.51614739828 1104.5150499358601 89.497 2 0.18338341736980238 0.0004893964110929853 0.001400375166724771 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 54775 15411 KYNANFVTF True PC9_epitope_Rep6 1102.54474510462 1102.54364993586 71.435 2 0.18337489470901025 0.0004893964110929853 0.0014006503328276286 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 114612 7262 TQDPTVTRL True PC9_epitope_Rep6 1029.5454733806098 1029.54436993586 37.061 2 0.18337443771727605 0.0004893964110929853 0.001400665088979768 ['ENSG00000130827|ENST00000369682|PLXNA3'] 9674 22992 AYFDVPELI True PC9_epitope_Rep2 1065.5382627418498 1065.5371699358602 93.933 2 0.18337019134296245 0.0004893964110929853 0.0014008022108254648 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 67990 10237 LTDFIQKY True H1975_Epitope_Rep3 1026.53859709502 1026.53750993586 44.424 2 0.1833659585807957 0.0004893964110929853 0.001400938906503179 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 139269 22463 YLIPLLERL True PC9_epitope_Rep1 1128.69068106232 1128.68958993586 91.211 2 0.18336225889487648 0.0004893964110929853 0.0014010583976059555 ['ENSG00000110367|ENST00000534980|DDX6'] 9326 3897 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 21.279 2 0.1833619380135555 0.0004893964110929853 0.0014010687617948636 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 77099 15902 NRLTEMETL True PC9_epitope_Rep3 1105.5437591284501 1105.5426699358602 66.316 2 0.18335001541934967 0.0004893964110929853 0.001401453905738145 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 90853 9386 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 41.066 3 0.1833485059866943 0.0004893964110929853 0.0014015026735688782 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 15057 13868 DYQALRTSI True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 61.245 2 0.18334721971531526 0.0004893964110929853 0.0014015442326875164 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 89615 19167 QYQKVPVLF True PC9_epitope_Rep1 1120.6280808057597 1120.6269899358601 78.52 2 0.18334499242393149 0.0004893964110929853 0.0014016161988569483 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 140466 20176 YRIESYWTY True PC9_epitope_Rep1 1279.5873381925899 1279.58624993586 82.436 2 0.18334253229095426 0.0004893964110929853 0.001401695692691975 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 67983 15105 LTDEYDTVLAY True H1975_Epitope_Rep2 1301.60271347321 1301.60160993586 63.256 2 0.18333892391207782 0.0004893964110929853 0.0014018122977646418 ['ENSG00000012963|ENST00000013070|UBR7'] 49348 10001 KESDVGFIP True H1975_Epitope_Rep2 990.5022115862998 990.50110993586 43.458 2 0.18333833712522007 0.0004893964110929853 0.0014018312607512074 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-4|HBS1L'] 32146 9123 GEVFKTYNV True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 40.044 2 0.18333527486023055 0.0004893964110929853 0.0014019302270743522 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 53222 8585 KQFEKQVEL True PC9_epitope_Rep1 1147.6237237013097 1147.62208490379 37.858 3 0.18333347059438382 0.0004893964110929853 0.0014019885406416242 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 24766 9586 FASHVSPEV True PC9_epitope_Rep5 971.47124581119 971.47014993586 41.833 2 0.18333260005863664 0.0004893964110929853 0.001402016677079244 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 8558 4689 ATVETTIAR True NCI_RA007_Epitope_Rep5 960.52400966004 960.52290993586 24.723 2 0.1833153536689499 0.0004893964110929853 0.0014025742113787424 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 23995 7251 EYMKHTRLF True NCI_RA007_Epitope_Rep4 1223.6121134717898 1223.61046490379 34.526 3 0.18331280691062596 0.0004893964110929853 0.0014026565607766753 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 129042 16836 VQNDTLLQV True PC9_epitope_Rep6 1028.5502244078798 1028.54912993586 77.274 2 0.18330842628425667 0.0004893964110929853 0.001402798219610289 ['ENSG00000184897|ENST00000333762|H1-10'] 134077 8419 VYKPAQNSW True PC9_epitope_Rep4 1091.5399940773498 1091.5388899358602 39.848 2 0.18330508890928357 0.0004893964110929853 0.0014029061518462563 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 141027 16225 YSLDHISSL True PC9_epitope_Rep4 1033.5080252427301 1033.5069299358602 70.352 2 0.18329868926566148 0.0004893964110929853 0.0014031131425350843 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 28601 8705 FSHAQTVVL True NCI_RA007_Epitope_Rep1 1000.5341804209199 1000.53308993586 37.863 2 0.18329642657956619 0.0004893964110929853 0.0014031863343954337 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 78281 19869 NYIGLINRI True PC9_epitope_Rep5 1074.61857875122 1074.61748993586 81.478 2 0.18329515706418037 0.0004893964110929853 0.001403227401507886 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 24577 10117 FAHTNVESL True PC9_epitope_Rep2 1016.4927095317599 1016.49160993586 44.253 2 0.1832932513769237 0.0004893964110929853 0.0014032890501845371 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 8190 6095 ATFDAISK True NCI_RA007_Epitope_Rep5 851.43888305375 851.43778993586 30.126 2 0.1832907924412177 0.0004893964110929853 0.001403368600370479 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF', 'ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 112436 8508 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.5120699358602 37.711 2 0.1832870476629634 0.0004893964110929853 0.0014034897581361692 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 1386 5770 AEEEAATRIPA True H1975_Epitope_Rep3 1156.57241640444 1156.5713099358602 27.221 2 0.18328547958186092 0.0004893964110929853 0.0014035404946151633 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 28518 13099 FSEEHYIFY True H1975_Epitope_Rep2 1233.5342399905699 1233.5331499358601 55.51 2 0.1832784979762443 0.0004893964110929853 0.001403766412186138 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'nc|ENSG00000145715|P20936-2|RASA1', 'nc|ENSG00000145715|P20936-4|RASA1'] 118159 16885 TYIPVPAKI True PC9_epitope_Rep5 1000.5957180483199 1000.59462993586 69.96 2 0.18327651491529778 0.0004893964110929853 0.0014038305886426925 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 76705 16755 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53856993586 69.275 2 0.18327391225418463 0.0004893964110929853 0.0014039148212612756 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 29268 11589 FVAESHIIL True H1975_Epitope_Rep1 1027.57023157647 1027.56912993586 49.564 2 0.18327301761684248 0.0004893964110929853 0.0014039437765064197 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 45531 5546 IQQNTFTR True PC9_epitope_Rep1 1006.51959298594 1006.51848993586 26.162 2 0.1832715823639762 0.0004893964110929853 0.0014039902302091355 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 12011 19838 DHSFSLEL True PC9_epitope_Rep2 946.4396113297399 946.43850993586 81.698 2 0.18326090246218948 0.0004893964110929853 0.0014043359465872682 ['ENSG00000128272|ENST00000674920|ATF4'] 55046 13763 KYSPFVVSF True NCI_RA007_Epitope_Rep3 1072.5593325396 1072.55822993586 61.464 2 0.18325633530379534 0.0004893964110929853 0.001404483814949273 ['ENSG00000086544|ENST00000263370|ITPKC'] 12695 12703 DLDSRVLYY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 54.073 2 0.18325633260820423 0.0004893964110929853 0.0014044839022275422 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 74620 18413 NGISDLVKV True PC9_epitope_Rep1 943.53384606775 943.53274993586 75.616 2 0.18324822902345872 0.0004893964110929853 0.0014047463059323807 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 9523 17825 AVWKESFQV True PC9_epitope_Rep5 1092.56039516876 1092.55928993586 73.583 2 0.18324721513599027 0.0004893964110929853 0.001404779140271603 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 134885 13799 VYVQHPITF True PC9_epitope_Rep6 1102.5811306133398 1102.58002993586 64.879 2 0.1832394385243827 0.0004893964110929853 0.0014050310082965988 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 135100 7040 WEEEAGRYAA True H1975_Epitope_Rep1 1180.5149015283198 1180.51380993586 32.112 2 0.183233183208063 0.0004893964110929853 0.0014052336376229654 ['ENST00000529712.5_1_11:47736424-47736610:-|nuORF'] 95619 16179 RYALQLQQI True PC9_epitope_Rep4 1131.64004247179 1131.6389499358602 70.177 2 0.18322754843271868 0.0004893964110929853 0.0014054161907522806 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1'] 17935 12669 EIAQEFKTDLR True PC9_epitope_Rep3 1348.6986795467199 1348.6970249037902 53.757 3 0.1832206896965119 0.0004893964110929853 0.0014056384293333318 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 131184 10380 VTELHVISY True H1975_Epitope_Rep3 1059.5600608155898 1059.5589699358602 44.983 2 0.18320456504142696 0.0004893964110929853 0.0014061610434030734 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 26191 7827 FHDGSVHIV True PC9_epitope_Rep4 1009.49812926537 1009.49702993586 37.514 2 0.18319890560066718 0.0004893964110929853 0.0014063445169553025 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 18965 12235 ELEKSVYWDY True H1975_Epitope_Rep3 1330.60813320682 1330.60702993586 52.237 2 0.1831977120318032 0.0004893964110929853 0.0014063832143576462 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'SGSM2|p.P666Rfs*58|1|0.3|ENSG00000141258|chr17:2375519-2375519|C/-|frameshift_variant', 'ENSG00000141258|ENST00000268989|SGSM2'] 21429 17216 ERIQDYDVSL True PC9_epitope_Rep5 1236.5986311522797 1236.5975299358602 71.242 2 0.18319200496204574 0.0004893964110929853 0.0014065682613936604 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 116283 7589 TTDGYLLR True NCI_RA007_Epitope_Rep5 937.48689587533 937.48578993586 35.882 2 0.18319135309937476 0.0004893964110929853 0.0014065893990564866 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000472161.1_1_18:57817108-57817555:+|nuORF'] 105715 6026 SSETEVALAR True NCI_RA007_Epitope_Rep2 1061.5353026197297 1061.5342099358602 28.048 2 0.18318483695114657 0.0004893964110929853 0.0014068007128132608 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 77517 10759 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4608749679298 46.414 1 0.1831814691778586 0.0004893964110929853 0.0014069099396233815 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 17853 22063 EHVFWVVSL True PC9_epitope_Rep5 1114.5811306133398 1114.58002993586 89.893 2 0.18317971078426254 0.0004893964110929853 0.0014069669728856424 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 78316 17205 NYIRITSEI True PC9_epitope_Rep3 1107.59242357303 1107.5913299358601 71.335 2 0.1831791450281431 0.0004893964110929853 0.0014069853236027578 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 108089 15135 SYAQYVHNL True PC9_epitope_Rep1 1093.51925863277 1093.5181699358602 63.038 2 0.1831769379756856 0.0004893964110929853 0.0014070569132705244 ['ENST00000543374.1_1_11:73555872-73556061:+|nuORF', 'ENST00000544140.5_1_11:73555872-73571072:+|nuORF', 'nc|ENSG00000175581|Q96GC5-3|MRPL48', 'ENSG00000175581|ENST00000310614|MRPL48'] 40393 4302 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 23.134 2 0.18317331403887901 0.0004893964110929853 0.0014071744700178191 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 142894 19400 YYTTPIYRF True PC9_epitope_Rep3 1222.60225998074 1222.60116993586 79.845 2 0.1831728038520268 0.0004893964110929853 0.0014071910207399702 ['ENSG00000104957|ENST00000221554|YJU2B'] 101613 19305 SLLQTLYKV True PC9_epitope_Rep4 1063.62774645259 1063.62664993586 82.363 2 0.1831716578285093 0.0004893964110929853 0.0014072281990397076 ['ENSG00000100401|ENST00000356244|RANGAP1'] 21122 13878 ERALQQYTL True PC9_epitope_Rep5 1120.5876725457601 1120.58656993586 58.401 2 0.18315443564282125 0.0004893964110929853 0.001407787024798921 ['ENSG00000181789|ENST00000314797|COPG1'] 21188 10675 ERDMSNVSL True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 45.952 2 0.1831432521487309 0.0004893964110929853 0.0014081500260897716 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 86545 9770 QLDHVNVYY True H1975_Epitope_Rep2 1149.54547338061 1149.54436993586 42.567 2 0.18314259435180327 0.0004893964110929853 0.0014081713802207936 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 90147 6463 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 29.832 2 0.183121844352725 0.0004893964110929853 0.0014088451562397559 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 28116 18507 FRADDTFEAL True PC9_epitope_Rep2 1183.55095268387 1183.54984993586 76.525 2 0.18312059122706134 0.0004893964110929853 0.0014088858569957178 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 134715 22352 VYTPVDSLVF True PC9_epitope_Rep2 1138.5910265906998 1138.58992993586 91.466 2 0.18310862949466197 0.0004893964110929853 0.0014092744260703197 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 134505 15417 VYQHLFTRI True PC9_epitope_Rep3 1175.6451278522297 1175.64349490379 64.456 3 0.1831066976057358 0.0004893964110929853 0.001409337192294759 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 28480 11725 FSDVDSPYY True H1975_Epitope_Rep2 1091.44475627983 1091.44364993586 50.173 2 0.18310159482904453 0.0004893964110929853 0.0014095029927459167 ['ENSG00000170779|ENST00000336219|CDCA4'] 11594 8386 DGETLEELM[Oxidation]K True H1975_Epitope_Rep3 1179.5329200416697 1179.53182993586 37.24 2 0.18309975505900164 0.0004893964110929853 0.00140956277572017 ['nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion'] 117992 8467 TYDNVHQQF True PC9_epitope_Rep2 1150.5043368446202 1150.5032299358602 37.935 2 0.1830925180126938 0.0004893964110929853 0.001409797966809936 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 106396 10562 STIFYYVQK True NCI_RA007_Epitope_Rep3 1147.5913609438696 1147.59026993586 48.599 2 0.18309063316902383 0.0004893964110929853 0.0014098592273204269 ['ENSG00000092148|ENST00000399332|HECTD1'] 77229 17793 NRVPAGNWVL True PC9_epitope_Rep5 1124.60907669668 1124.6079699358602 73.458 2 0.18307992472046286 0.0004893964110929853 0.001410207320097214 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000590367.5_1_17:42931463-42950195:-|nuORF', 'ENST00000586276.5_1_17:42937766-42940268:-|nuORF'] 32144 8833 GEVFKTYNV True H1975_Epitope_Rep1 1055.5287606873098 1055.52766993586 38.898 2 0.18307938519179418 0.0004893964110929853 0.0014102248604939418 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 115617 20351 TRVDTILEF True PC9_epitope_Rep1 1092.5815245361598 1092.5804299358601 83.11 2 0.18307679294558818 0.0004893964110929853 0.0014103091390032082 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 138291 6255 YHDDTENSL True PC9_epitope_Rep1 1092.43598250128 1092.4348899358602 28.873 2 0.1830719334713091 0.0004893964110929853 0.0014104671427080445 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 68060 11962 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48127496793 51.17 1 0.18307181267302355 0.0004893964110929853 0.0014104710706380314 ['ENSG00000174231|ENST00000304992|PRPF8'] 36231 11706 GVDDAANFRTV True PC9_epitope_Rep4 1163.5571006934701 1163.5560099358602 52.788 2 0.18306975250959537 0.0004893964110929853 0.0014105380615026346 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 140381 20388 YRDWFSSQL True PC9_epitope_Rep3 1200.55637241748 1200.55526993586 83.673 2 0.1830518521239584 0.0004893964110929853 0.0014111202671852749 ['ENST00000522359.2_1_11:61630757-61632750:+|nuORF', 'nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2'] 103396 6250 SPPPPPPPP True H1975_Epitope_Rep3 881.4647038787699 881.46360993586 29.052 2 0.18304298475412978 0.0004893964110929853 0.0014114087654221847 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 29260 20175 FVADEELVHL True PC9_epitope_Rep1 1170.5920892198599 1170.59098993586 82.432 2 0.1830421019838123 0.0004893964110929853 0.001411437489426162 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'ENST00000530673.1_2_11:64878667-64879056:+|nuORF', 'ENST00000533827.5_1_11:64876997-64879056:+|nuORF'] 7581 8326 ASEYDQIRY True H1975_Epitope_Rep2 1143.51965255559 1143.5185499358602 36.976 2 0.1830183309986199 0.0004893964110929853 0.0014122111814658276 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000064393|Q9H2X6-2|HIPK2', 'nc|ENSG00000064393|Q9H2X6-3|HIPK2', 'ENSG00000064393|ENST00000406875|HIPK2'] 1933 7860 AEILNGKEISA True H1975_Epitope_Rep3 1143.61355294043 1143.61244993586 35.209 2 0.18301730625200444 0.0004893964110929853 0.0014122445442150988 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 72894 19268 MPTLPPPSV True PC9_epitope_Rep1 937.49428975489 937.49318993586 78.916 2 0.18301642404438334 0.0004893964110929853 0.0014122732669447984 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 91662 17633 RITNQVIYL True PC9_epitope_Rep1 1118.64479349906 1118.64368993586 72.618 2 0.18299026676400612 0.0004893964110929853 0.0014131251562269113 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 142915 14039 YYVWLQHTL True NCI_RA007_Epitope_Rep3 1221.61824439805 1221.6171499358602 62.529 2 0.18298453522901637 0.0004893964110929853 0.0014133118894059584 ['nc|ENSG00000003402|O15519-4|CFLAR', 'nc|ENSG00000003402|O15519-15|CFLAR', 'nc|ENSG00000003402|O15519-8|CFLAR', 'ENSG00000003402|ENST00000309955|CFLAR'] 65267 19128 LQVEDLDRL True PC9_epitope_Rep5 1099.5873381925899 1099.58624993586 78.61 2 0.1829744768305164 0.0004893964110929853 0.0014136396514033529 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF', 'ENST00000479375.6_1_9:130556974-130569527:+|nuORF', 'ENST00000460181.5_1_9:130565203-130569527:+|nuORF'] 68123 11652 LTDPIQGTEY True H1975_Epitope_Rep2 1135.53971929383 1135.53917496793 49.889 1 0.18297314268603374 0.0004893964110929853 0.001413683131427675 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 68385 8083 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.51367496793 36.038 1 0.18297054490289083 0.0004893964110929853 0.0014137677975235817 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 9513 5030 AVVVPSGEEQR True H1975_Epitope_Rep3 1169.6040508858898 1169.6029499358601 24.469 2 0.18296495120596487 0.0004893964110929853 0.0014139501227106242 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000463348.5_1_6:30229165-30231201:+|nuORF', 'ENST00000482052.5_1_6:30229165-30260340:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H'] 18366 9363 EITALAPSTM[Oxidation]K True PC9_epitope_Rep5 1176.6060254122801 1176.6049299358601 40.969 2 0.1829614199667485 0.0004893964110929853 0.0014140652347248263 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115551 4651 TRSITNTTV True PC9_epitope_Rep6 991.52982331647 991.52872993586 25.21 2 0.18296126445949962 0.0004893964110929853 0.001414070304195889 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 129928 12572 VRTPYTMSY True PC9_epitope_Rep2 1116.52738078832 1116.5262899358602 53.666 2 0.18295666861862442 0.0004893964110929853 0.0014142201349035058 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 109756 8924 TEDPNQLTV True H1975_Epitope_Rep1 1015.4822044177099 1015.48110993586 39.231 2 0.1829548094842994 0.0004893964110929853 0.0014142807497486629 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 106489 10596 STLDIVLANK True NCI_RA007_Epitope_Rep3 1072.61282466444 1072.61172993586 48.728 2 0.18294162408060172 0.0004893964110929853 0.0014147107187439578 ['ENSG00000167325|ENST00000300738|RRM1'] 92506 20181 RLYDGLFKVI True PC9_epitope_Rep2 1222.70739375562 1222.70628993586 83.041 2 0.18293771759726912 0.0004893964110929853 0.0014148381322395915 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 32076 5545 GESNRLLSA True NCI_RA007_Epitope_Rep3 945.4879585044899 945.48686993586 28.807 2 0.18293768400548308 0.0004893964110929853 0.0014148392279160144 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 101286 21491 SLIFKLEEL True PC9_epitope_Rep5 1090.6274120994199 1090.62630993586 87.699 2 0.1829353035449096 0.0004893964110929853 0.0014149168744949613 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2'] 115574 7300 TRSTFSTNY True PC9_epitope_Rep2 1075.49343780775 1075.4923499358601 33.464 2 0.18292518371843622 0.0004893964110929853 0.0014152470137080426 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 106950 5979 SVEAAAELSAK True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 28.009 2 0.18292222297704397 0.0004893964110929853 0.0014153436166035821 ['ENSG00000159335|ENST00000309083|PTMS'] 105139 15765 SRFLANEVL True PC9_epitope_Rep4 1047.57129420563 1047.57018993586 68.562 2 0.18292089227703676 0.0004893964110929853 0.0014153870367573796 ['ENSG00000166483|ENST00000450114|WEE1', 'nc|ENSG00000166483|P30291-2|WEE1'] 42641 3412 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 17.959 2 0.18291987123642356 0.0004893964110929853 0.0014154203537669497 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 134908 9887 VYVVGTAHF True NCI_RA007_Epitope_Rep3 991.5127167003499 991.51160993586 45.968 2 0.1829188515574917 0.0004893964110929853 0.0014154536271286254 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 84249 22880 PYNDYFEYF True PC9_epitope_Rep1 1256.50260550912 1256.5015099358602 92.803 2 0.18291718584369696 0.0004893964110929853 0.0014155079830784664 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 136277 13065 WSDQNIEYEY True H1975_Epitope_Rep2 1345.54626122625 1345.54516993586 55.377 2 0.18291198672853054 0.0004893964110929853 0.0014156776552368936 ['ENSG00000196757|ENST00000254321|ZNF700'] 84181 11059 PYKVTQDEL True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 47.427 2 0.18290534168614828 0.0004893964110929853 0.0014158945446346403 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 72062 19591 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55707496793 82.083 1 0.18290235420701229 0.0004893964110929853 0.0014159920646527344 ['ENSG00000198712|ENST00000361739|MT-CO2'] 108344 13821 SYLDRTEQL True PC9_epitope_Rep3 1123.55095268387 1123.54984993586 58.242 2 0.18289939466483804 0.0004893964110929853 0.001416088679364103 ['ENSG00000065268|ENST00000585809|WDR18'] 92865 16708 RPFGGLIRDV True PC9_epitope_Rep1 1128.64037682496 1128.63874490379 69.095 3 0.18289789375399695 0.0004893964110929853 0.0014161376793550198 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 106282 6368 STFDTQITK True NCI_RA007_Epitope_Rep5 1039.51858992643 1039.51748993586 31.169 2 0.1828910870373359 0.0004893964110929853 0.0014163599184482875 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 133702 18456 VYAVIPAEKF True PC9_epitope_Rep3 1135.62774645259 1135.62664993586 76.195 2 0.18288956547628435 0.0004893964110929853 0.0014164096021502314 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 41634 7206 IAEKETLEY True H1975_Epitope_Rep2 1094.54955570154 1094.5484499358602 32.652 2 0.18287930497618798 0.0004893964110929853 0.0014167446850025377 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14', 'nc|ENSG00000185842|Q0VDD8-2|DNAH14', 'ENST00000498360.5_1_1:225142255-225148920:+|nuORF', 'nc|ENSG00000185842|Q0VDD8-3|DNAH14'] 115436 14717 TRMPDGPVAL True PC9_epitope_Rep1 1055.54336520563 1055.54226993586 61.431 2 0.1828789571123988 0.0004893964110929853 0.0014167560467757904 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 30062 19172 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6166049037902 78.782 3 0.18287179219671154 0.0004893964110929853 0.0014169900843939733 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 65266 19219 LQVEDLDRL True PC9_epitope_Rep1 1099.5873381925899 1099.58624993586 78.723 2 0.18285747438163238 0.0004893964110929853 0.0014174578832026822 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF', 'ENST00000479375.6_1_9:130556974-130569527:+|nuORF', 'ENST00000460181.5_1_9:130565203-130569527:+|nuORF'] 32673 5684 GGPTTPLSPTR True H1975_Epitope_Rep3 1082.57202248162 1082.57092993586 26.892 2 0.18285158309177943 0.0004893964110929853 0.0014176504113082445 ['ENSG00000113368|ENST00000261366|LMNB1', 'LMNB1|p.L380Hfs*32|1|0.07|ENSG00000113368|chr5:126819120-126819121|-/ATATTTACTT|frameshift_variant'] 96006 19611 RYLNEFEEL True PC9_epitope_Rep5 1211.5822528121498 1211.5811499358601 80.486 2 0.18284268033856516 0.0004893964110929853 0.0014179414041471515 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 117765 20735 TVVNFLIRV True PC9_epitope_Rep2 1059.64406522307 1059.64296993586 85.196 2 0.1828385693861732 0.0004893964110929853 0.001418075793759466 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 106569 3680 STM[Oxidation]STNGIPR True NCI_RA007_Epitope_Rep4 1078.50770835334 1078.50660993586 20.265 2 0.1828294413363174 0.0004893964110929853 0.0014183742410742762 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 105160 10539 SRFPQGAQL True PC9_epitope_Rep2 1002.5246783663797 1002.52358993586 45.859 2 0.18282593317014056 0.0004893964110929853 0.0014184889595116362 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 89412 19264 QYASAFHFL True PC9_epitope_Rep4 1082.51853035678 1082.51742993586 82.202 2 0.182822359908891 0.0004893964110929853 0.0014186058161426889 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 109824 5420 TEEKFIVKA True H1975_Epitope_Rep1 1063.5913609438699 1063.59026993586 25.905 2 0.18282139219342897 0.0004893964110929853 0.0014186374650742594 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 107148 7135 SVIDTSTIVRK True NCI_RA007_Epitope_Rep4 1217.69795127073 1217.6968499358602 34.063 2 0.18281908696412216 0.0004893964110929853 0.0014187128599665634 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 113214 11950 TLQKEGVIGV True PC9_epitope_Rep3 1042.6022599807397 1042.60116993586 50.989 2 0.1828047056003674 0.0004893964110929853 0.0014191833079161584 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 54567 6080 KYISKPENL True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 28.78 2 0.18280111122953366 0.0004893964110929853 0.0014193009125867263 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 54991 11746 KYQIINEEF True NCI_RA007_Epitope_Rep1 1182.5920892198599 1182.59098993586 49.666 2 0.18279915632834348 0.0004893964110929853 0.0014193648793445412 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 20818 20174 EQIKDIFYI True PC9_epitope_Rep4 1167.6175756917098 1167.61646993586 85.736 2 0.1827843516645014 0.0004893964110929853 0.0014198493998486767 ['ENSG00000164902|ENST00000297540|PHAX'] 115902 8616 TSFDGSLIQK True NCI_RA007_Epitope_Rep4 1094.56078909158 1094.5596899358602 39.924 2 0.18278405426172628 0.0004893964110929853 0.0014198591348135506 ['ENSG00000177485|ENST00000557385|ZBTB33'] 72039 18477 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 76.672 2 0.18277165444657317 0.0004893964110929853 0.0014202650808303361 ['ENSG00000198712|ENST00000361739|MT-CO2'] 25337 11061 FDVSGYPTLK True H1975_Epitope_Rep3 1125.57062549929 1125.5695299358601 47.637 2 0.182765667603724 0.0004893964110929853 0.00142046112014388 ['ENSG00000155660|ENST00000652332|PDIA4'] 28521 4989 FSEENHEPLR True NCI_RA007_Epitope_Rep2 1256.5785644140399 1256.57692490379 24.029 3 0.18275535493268552 0.0004893964110929853 0.0014207988723945384 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 110231 4947 TEQRNVYKDL True H1975_Epitope_Rep2 1264.6411646706 1264.63951490379 24.111 3 0.18275049638126603 0.0004893964110929853 0.0014209580236251179 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF'] 99727 12822 SIIDDRVIL True NCI_RA007_Epitope_Rep3 1042.60225998074 1042.60116993586 57.678 2 0.18274856703956455 0.0004893964110929853 0.0014210212278926136 ['ENSG00000165475|ENST00000298248|CRYL1', 'nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'CRYL1|p.H161Tfs*15|1|0.41|ENSG00000165475|chr13:20432254-20432254|G/-|frameshift_variant'] 116725 11218 TVDGVVFHY True H1975_Epitope_Rep3 1035.50254593947 1035.50197496793 48.249 1 0.1827378496811674 0.0004893964110929853 0.0014213723744802482 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant', 'nc|ENSG00000038427|P13611-4|VCAN'] 65021 19460 LQIEDFEARIA True PC9_epitope_Rep4 1303.67721582615 1303.67610993586 82.968 2 0.1827357211104658 0.0004893964110929853 0.0014214421259274726 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 85281 6447 QEQMNEFRA True H1975_Epitope_Rep2 1151.5029569456299 1151.50184993586 29.719 2 0.18272097518156458 0.0004893964110929853 0.0014219254316491874 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 13075 5635 DLPVSEQQER True H1975_Epitope_Rep3 1199.57823006087 1199.57712993586 26.712 2 0.18270906648238447 0.0004893964110929853 0.001422315865843613 ['ENSG00000185627|ENST00000532097|PSMD13', 'nc|ENSG00000185627|Q9UNM6-2|PSMD13'] 118446 16831 TYPIKTPTF True PC9_epitope_Rep1 1066.5698972233001 1066.5688099358601 69.565 2 0.18270667513760314 0.0004893964110929853 0.0014223942805385865 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 54031 14413 KVIDEIYRV True PC9_epitope_Rep1 1133.64445914589 1133.64280490379 60.262 3 0.1827023912244241 0.0004893964110929853 0.0014225347653619694 ['ENSG00000143756|ENST00000366862|FBXO28'] 90528 8750 RELVKNWVP True H1975_Epitope_Rep3 1139.64512785223 1139.64402993586 38.661 2 0.18270209882628913 0.0004893964110929853 0.0014225443546487233 ['ENSG00000127540|ENST00000591899|UQCR11'] 72261 14822 MHSDMIYNV True PC9_epitope_Rep5 1108.4681516600401 1108.4670499358601 62.012 2 0.18270066058145018 0.0004893964110929853 0.001422591523273475 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 104997 12538 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 56.047 2 0.18269633806776034 0.0004893964110929853 0.0014227332937072044 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 120497 5654 VEFATHEEA True H1975_Epitope_Rep3 1031.4559896698697 1031.4548899358601 26.778 2 0.18269489932752886 0.0004893964110929853 0.001422780484859457 ['ENSG00000169813|ENST00000682386|HNRNPF'] 133812 18717 VYFVAPAKF True PC9_epitope_Rep2 1040.5695033004797 1040.56840993586 77.369 2 0.18269363251091825 0.0004893964110929853 0.0014228220381591267 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 71901 6907 MEQELAHAV True H1975_Epitope_Rep2 1026.4804305958999 1026.47932993586 31.488 2 0.18268864405077512 0.0004893964110929853 0.0014229856782285645 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 110094 4827 TEMDAKTVTA True H1975_Epitope_Rep3 1065.50122561013 1065.50012993586 23.692 2 0.18268675044529092 0.0004893964110929853 0.0014230478004785502 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2', 'ENST00000463171.5_1_3:189681716-189688667:-|nuORF'] 108784 13254 SYTHIQYLF True NCI_RA007_Epitope_Rep3 1170.5709598524602 1170.5698699358602 59.409 2 0.18268438148623775 0.0004893964110929853 0.0014231255211623205 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 44684 15005 ILTERGYSF True PC9_epitope_Rep2 1084.55530978832 1084.5542099358602 62.972 2 0.18268365050065236 0.0004893964110929853 0.0014231495041576777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 96035 19598 RYLPTGSFPF True PC9_epitope_Rep4 1183.6025943339098 1183.6014899358602 83.508 2 0.18268045270911595 0.0004893964110929853 0.0014232544256524344 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 127419 8114 VNFAM[Oxidation]NVGK True PC9_epitope_Rep1 994.4906017372199 994.48950993586 36.037 2 0.18267971796843463 0.0004893964110929853 0.0014232785340383967 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 48851 7329 KEAEPIPETV True H1975_Epitope_Rep1 1111.57610480255 1111.5750099358602 33.2 2 0.18267961985549164 0.0004893964110929853 0.0014232817533612332 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6'] 71474 18128 LYVVDLKKF True PC9_epitope_Rep5 1123.6641319613097 1123.66249490379 74.739 3 0.1826786711837424 0.0004893964110929853 0.0014233128819510332 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 25798 11931 FEWENKVTV True NCI_RA007_Epitope_Rep5 1150.56587447202 1150.56476993586 52.55 2 0.18266929909288784 0.0004893964110929853 0.0014236204432927497 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 71047 17710 LYKDVRDLL True PC9_epitope_Rep5 1133.6444591458899 1133.64280490379 73.139 3 0.18266867114501573 0.0004893964110929853 0.0014236410528668522 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 17542 18469 EHGNFLITV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 76.373 2 0.18265250017093987 0.0004893964110929853 0.001424171895609278 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 117234 14177 TVLQKMNEI True PC9_epitope_Rep5 1074.57433098074 1074.5732299358601 59.541 2 0.18265024972119748 0.0004893964110929853 0.001424245786590853 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.A926S|1|0.16|ENSG00000196878|chr1:209618585-209618585|C/A|missense_variant'] 133879 12952 VYGSFASKL True PC9_epitope_Rep4 970.5123823471799 970.51128993586 57.709 2 0.18264513875713523 0.0004893964110929853 0.0014244136136078154 ['ENSG00000155096|ENST00000337198|AZIN1'] 111494 16982 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62844993586 70.567 2 0.18263941912310577 0.0004893964110929853 0.0014246014508158158 ['ENSG00000076003|ENST00000264156|MCM6'] 37831 14270 GYIESVQHI True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 59.893 2 0.18263410645464997 0.0004893964110929853 0.0014247759451956313 ['ENSG00000125871|ENST00000377710|MGME1'] 92725 6622 RNVSTGDVNVE True PC9_epitope_Rep1 1188.5734790335998 1188.5723899358602 30.274 2 0.18261842155652697 0.0004893964110929853 0.0014252912400125072 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 107003 7459 SVFDSSSDMEK True NCI_RA007_Epitope_Rep4 1230.50743318938 1230.50632993586 35.336 2 0.18261765702831015 0.0004893964110929853 0.0014253163617753523 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 799 7269 AAYEAELGDAR True NCI_RA007_Epitope_Rep2 1164.54111627616 1164.54000993586 32.895 2 0.18261316474362058 0.0004893964110929853 0.0014254639834868547 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 78591 22037 NYSGAAEYLYF True PC9_epitope_Rep5 1296.56626839484 1296.56516993586 89.792 2 0.18260231091083623 0.0004893964110929853 0.0014258207163180844 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 97926 6037 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 28.199 2 0.18260081171746415 0.0004893964110929853 0.0014258699973256936 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 78589 21097 NYSGAAEYLYF True PC9_epitope_Rep4 1296.56626839484 1296.56516993586 89.312 2 0.18259625237546706 0.0004893964110929853 0.0014260198810548054 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 75085 5633 NHVNSGCQL True PC9_epitope_Rep3 970.42906372938 970.42796993586 26.744 2 0.18259428540390918 0.0004893964110929853 0.0014260845481183933 ['ENSG00000177606|ENST00000371222|JUN'] 29339 17874 FVDEYDPTI True PC9_epitope_Rep6 1097.49170647225 1097.4906099358602 81.379 2 0.18258844126594756 0.0004893964110929853 0.001426276700029089 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 27546 7342 FNDPNAKEM True PC9_epitope_Rep3 1064.45969515132 1064.4585899358601 33.25 2 0.18257494649188227 0.0004893964110929853 0.0014267204996079065 ['ENSG00000056097|ENST00000265069|ZFR'] 17430 11698 EHDSQIVQI True PC9_epitope_Rep2 1067.5247379360299 1067.52364993586 50.329 2 0.1825732696092855 0.0004893964110929853 0.0014267756565316512 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1', 'RC3H1|p.M449*|1|0.14|ENSG00000135870|chr1:173965110-173965110|T/-|frameshift_variant'] 142559 17850 YYLNDLERI True PC9_epitope_Rep6 1197.6029882567298 1197.60188993586 81.288 2 0.1825728570247549 0.0004893964110929853 0.0014267892278113673 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 14995 15551 DYKESFNTI True PC9_epitope_Rep1 1115.5135045459901 1115.5124099358602 64.64 2 0.18255568884345424 0.0004893964110929853 0.001427354061190328 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 90951 5488 REYQLNDSAA True NCI_RA007_Epitope_Rep4 1165.53636524889 1165.53526993586 27.696 2 0.18254230044491046 0.0004893964110929853 0.0014277946951736374 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 96715 21215 SALPDIKVLTL True PC9_epitope_Rep3 1168.7067250492798 1168.70562993586 86.892 2 0.18253718277543837 0.0004893964110929853 0.001427963162013315 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 78418 14195 NYLSHHLTI True PC9_epitope_Rep1 1096.5665431783602 1096.5654499358602 59.423 2 0.18253481482163608 0.0004893964110929853 0.0014280411186285138 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 141332 8866 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.42897496793 39.072 1 0.1825342672536651 0.0004893964110929853 0.0014280591460001672 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 101171 7153 SLGTADVHFER True NCI_RA007_Epitope_Rep5 1230.59929985862 1230.59764490379 34.19 3 0.18252896348620334 0.0004893964110929853 0.0014282337717182398 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 109700 6779 TEDFSNPSA True H1975_Epitope_Rep2 966.3930550601399 966.3925049679301 30.991 1 0.18252590738644106 0.0004893964110929853 0.0014283344030445457 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 98368 13342 SEYLRYEDTLL True H1975_Epitope_Rep3 1400.6823607762399 1400.6812699358602 56.582 2 0.1825249719460052 0.0004893964110929853 0.0014283652066699297 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 46836 10232 ITIFEKQEY True H1975_Epitope_Rep1 1169.5968402471299 1169.59574993586 44.301 2 0.18250231203738876 0.0004893964110929853 0.001429111590505119 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 127998 10316 VPIESIERA True PC9_epitope_Rep2 1012.5553097883198 1012.55420993586 45.009 2 0.18250074051496312 0.0004893964110929853 0.0014291633686172723 ['ENSG00000167136|ENST00000372642|ENDOG'] 86039 10876 QHQSGIVQL True PC9_epitope_Rep1 1008.5352430500798 1008.53414993586 46.719 2 0.18249514378217782 0.0004893964110929853 0.0014293477835832429 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 75558 10745 NLAENISRV True PC9_epitope_Rep6 1014.54580773378 1014.5447099358599 52.156 2 0.18249132107151173 0.0004893964110929853 0.0014294737573959297 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 35543 12912 GSVDGVIKEV True PC9_epitope_Rep2 1001.5393253710099 1001.53822993586 54.962 2 0.18249123054930064 0.0004893964110929853 0.0014294767406045844 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 110047 5242 TELDKIRQA True NCI_RA007_Epitope_Rep3 1072.58767254576 1072.58656993586 27.623 2 0.18248795831800224 0.0004893964110929853 0.0014295845829541934 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54619 10969 KYLDNPNAL True PC9_epitope_Rep2 1046.53965972418 1046.53856993586 47.515 2 0.18247626606433046 0.0004893964110929853 0.0014299699891130492 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 68937 7928 LTPDETYVPK True NCI_RA007_Epitope_Rep2 1161.5917548666898 1161.59064993586 35.469 2 0.18246876818914795 0.0004893964110929853 0.001430217192774435 ['CON__P02769'] 68416 10948 LTETVVTEY True H1975_Epitope_Rep2 1053.52300660053 1053.5224749679298 47.142 1 0.18245448557466554 0.0004893964110929853 0.0014306882066213102 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 111312 14751 THMTAIVGM True PC9_epitope_Rep1 959.4568587003499 959.45576993586 61.558 2 0.18245249022903556 0.0004893964110929853 0.0014307540217531123 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 72868 11271 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45333496793 48.346 1 0.18244172917848242 0.0004893964110929853 0.0014311090200661474 ['ENSG00000115233|ENST00000409682|PSMD14'] 88598 11356 QTDPVTLQY True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 48.73 2 0.18244132430764576 0.0004893964110929853 0.0014311223781488564 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 14412 14728 DTDLFSQPTY True H1975_Epitope_Rep2 1185.51898384925 1185.51788993586 61.813 2 0.18244082956395702 0.0004893964110929853 0.0014311387016159773 ['ENSG00000153933|ENST00000284061|DGKE', 'nc|ENSG00000153933|P52429-2|DGKE', 'ENST00000576869.5_1_17:54912147-54924989:+|nuORF'] 48404 15129 IYVHDLLTF True NCI_RA007_Epitope_Rep3 1119.59644632431 1119.5953499358602 67.012 2 0.18243849910330767 0.0004893964110929853 0.0014312155948440555 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 11742 10850 DHASIQMNV True PC9_epitope_Rep4 1013.46002950449 1013.4589299358599 49.493 2 0.18243842954667427 0.0004893964110929853 0.001431217889919219 ['ENSG00000171858|ENST00000343986|RPS21'] 118962 10721 VADTVARVL True PC9_epitope_Rep6 942.5498304850598 942.54872993586 52.05 2 0.1824359358861745 0.0004893964110929853 0.0014313001726212215 ['ENSG00000145632|ENST00000274289|PLK2'] 46608 6951 ITDEFVKQKY True H1975_Epitope_Rep2 1269.66050313285 1269.65884490379 31.656 3 0.18243101847563212 0.0004893964110929853 0.0014314624450984528 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant', 'ENST00000475183.1_1_X:54953428-54957230:+|nuORF', 'nc|ENSG00000067445|Q12816-5|TRO', 'nc|ENSG00000067445|Q12816-2|TRO', 'ENST00000492706.5_1_X:54953428-54957450:+|nuORF', 'nc|ENSG00000067445|Q12816-3|TRO', 'TRO|p.S964Kfs*35|1|0.19|ENSG00000067445|chrX:54929613-54929614|-/A|frameshift_variant', 'nc|ENSG00000067445|Q12816-4|TRO', 'ENSG00000067445|ENST00000173898|TRO'] 137569 8970 YEEMGIKPP True H1975_Epitope_Rep3 1062.5055827145798 1062.5044899358602 39.498 2 0.18242823638455688 0.0004893964110929853 0.0014315542610981767 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 33725 10958 GLIDHQTYL True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 47.114 2 0.18242573012880645 0.0004893964110929853 0.001431636978891636 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 54663 14596 KYLSGIAHF True PC9_epitope_Rep5 1034.5549158654999 1034.55380993586 61.145 2 0.18241318172019091 0.0004893964110929853 0.0014320512052523446 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 1923 13486 AEILELAGNAA True H1975_Epitope_Rep1 1070.5607890915799 1070.5596899358602 56.993 2 0.1824094579382566 0.0004893964110929853 0.0014321741514079411 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 5261 11597 ALPSKLPTF True NCI_RA007_Epitope_Rep3 972.56441792004 972.56332993586 52.743 2 0.18240915682353068 0.0004893964110929853 0.0014321840936171925 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 6903 13761 AQIEVVPSA True PC9_epitope_Rep4 912.4916469025999 912.49054993586 60.827 2 0.18240599279235373 0.0004893964110929853 0.0014322885678143124 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 134109 19474 VYKVPPFTF True PC9_epitope_Rep4 1096.59571804832 1096.5946299358602 83.023 2 0.18239346235805276 0.0004893964110929853 0.0014327023894071403 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 115696 8662 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.58478993586 37.696 2 0.18239184996137306 0.0004893964110929853 0.0014327556480221598 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 139025 5244 YLAEVATGEKR True NCI_RA007_Epitope_Rep1 1235.6510010783097 1235.64934490379 24.481 3 0.182389412688318 0.0004893964110929853 0.0014328361566596198 ['ENSG00000170027|ENST00000307630|YWHAG'] 28865 11349 FTDEEGYGRYL True H1975_Epitope_Rep3 1348.59354577184 1348.59244993586 48.766 2 0.18238230379350365 0.0004893964110929853 0.0014330710054180466 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 28977 16142 FTDVPSIQIY True H1975_Epitope_Rep3 1181.5968402471299 1181.59574993586 67.547 2 0.18237533708713127 0.0004893964110929853 0.0014333011942769688 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2'] 88258 14052 QSDPWQQELY True H1975_Epitope_Rep3 1292.5673310240002 1292.5667749679299 59.374 1 0.18237453395876846 0.0004893964110929853 0.0014333277330435994 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 98912 16816 SHADVVNLL True PC9_epitope_Rep1 966.51344497634 966.51234993586 69.509 2 0.18236920627418077 0.0004893964110929853 0.001433503794801753 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 90948 5936 REYQLNDSAA True NCI_RA007_Epitope_Rep2 1165.53636524889 1165.53526993586 27.699 2 0.18236837662054967 0.0004893964110929853 0.001433531213967473 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 23082 17191 EVIKELAQI True PC9_epitope_Rep2 1041.6070110080097 1041.6059099358602 71.384 2 0.18236830476823024 0.0004893964110929853 0.0014335335886345594 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 126023 16416 VLDSVDVRL True PC9_epitope_Rep4 1014.57095985246 1014.56986993586 71.107 2 0.18236506005192132 0.0004893964110929853 0.001433640828265512 ['ENSG00000169105|ENST00000306243|CHST14'] 141026 17722 YSLDHISSL True PC9_epitope_Rep3 1033.5080252427301 1033.5069299358602 73.364 2 0.1823525762607984 0.0004893964110929853 0.0014340534992929815 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 78599 19662 NYSNIRFQF True PC9_epitope_Rep1 1187.57235683479 1187.5712499358601 80.454 2 0.18235047199135948 0.0004893964110929853 0.0014341230708969591 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 115839 18748 TSDTQWGWFY True H1975_Epitope_Rep3 1289.53530261973 1289.5342099358602 78.622 2 0.1823439507211571 0.0004893964110929853 0.001434338699383974 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11'] 109626 10405 TEAGMFAIRA True H1975_Epitope_Rep1 1065.5277151414898 1065.52660993586 44.972 2 0.18233733934773239 0.0004893964110929853 0.0014345573403365414 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'PSMC2|p.R400L|1|0.49|ENSG00000161057|chr7:103367951-103367951|G/T|missense_variant', 'nc|ENSG00000161057|P35998-2|PSMC2'] 1579 9490 AEEVWARVA True H1975_Epitope_Rep2 1029.5243440132097 1029.5232499358601 41.472 2 0.18233045029578462 0.0004893964110929853 0.001434785199768463 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 71488 9305 LYWSHPRKF True PC9_epitope_Rep2 1232.6454622053996 1232.6438249037901 41.132 3 0.18232820018477022 0.0004893964110929853 0.00143485963136666 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 5289 12300 ALQEMVHQV True PC9_epitope_Rep5 1053.52771514149 1053.52660993586 52.302 2 0.18232489482246664 0.0004893964110929853 0.0014349689767216116 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 13496 8799 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep1 1091.49172393603 1091.4906299358602 38.229 2 0.1823219343606346 0.0004893964110929853 0.0014350669194434394 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 115887 5186 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59746993586 25.02 2 0.1823200575785796 0.0004893964110929853 0.0014351290136113593 ['ENSG00000204560|ENST00000376442|DHX16'] 95630 17345 RYALQMEQL True PC9_epitope_Rep5 1150.5804789903398 1150.57938993586 71.716 2 0.18231677512128358 0.0004893964110929853 0.0014352376216414655 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 105652 12103 SSEELLSLKY True H1975_Epitope_Rep1 1167.60231955039 1167.6012299358601 51.569 2 0.1823055182152721 0.0004893964110929853 0.0014356101461347065 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 4246 11894 AIDQLHLEY True H1975_Epitope_Rep2 1100.5502244078798 1100.54912993586 50.83 2 0.1823026508596527 0.0004893964110929853 0.001435705050941098 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 109885 4730 TEEYPNKPP True H1975_Epitope_Rep3 1073.5029398622898 1073.50184993586 23.319 2 0.18230126649796285 0.0004893964110929853 0.001435750873311369 ['ENSG00000077721|ENST00000371558|UBE2A'] 40523 7652 HRDYETATL True PC9_epitope_Rep5 1104.51998690876 1104.5188899358602 34.379 2 0.18229325024486343 0.0004893964110929853 0.0014360162400942728 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 95182 22437 RVIDYILDL True PC9_epitope_Rep1 1118.63356010902 1118.6324699358602 91.126 2 0.18229123534476716 0.0004893964110929853 0.001436082948256892 ['ENSG00000117318|ENST00000374561|ID3'] 29885 19762 FVVDEVHLI True PC9_epitope_Rep4 1069.5807962601698 1069.5796899358602 84.138 2 0.18228750723532525 0.0004893964110929853 0.0014362063845653717 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 7265 14409 ARDFTVSAL True PC9_epitope_Rep2 978.5134449763399 978.51234993586 60.691 2 0.1822827454389764 0.0004893964110929853 0.0014363640613231188 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 133346 17101 VVVDPIQSV True PC9_epitope_Rep6 954.53859709502 954.53750993586 78.354 2 0.18227379762675217 0.0004893964110929853 0.0014366603960184513 ['ENSG00000115233|ENST00000409682|PSMD14'] 77936 7222 NVKVDPEIQ True PC9_epitope_Rep6 1040.5502244078798 1040.54912993586 36.888 2 0.18226946106548728 0.0004893964110929853 0.0014368040368034703 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 53775 11284 KTAAEDAIRNL True PC9_epitope_Rep1 1200.6462500510397 1200.64459490379 48.283 3 0.18225823713713313 0.0004893964110929853 0.001437175876055269 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'RBM4-DPP3|1|fusion', 'ENSG00000173914|ENST00000310046|RBM4B'] 7899 7000 ATAIGMPVEK True NCI_RA007_Epitope_Rep5 1015.5372171960299 1015.5361099358599 33.605 2 0.18225774880571033 0.0004893964110929853 0.0014371920562510747 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 82417 6176 PPPAPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 31.299 2 0.1822573140164019 0.0004893964110929853 0.0014372064625555515 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'DGKK|p.A42P|1|0.95|ENSG00000274588|chrX:50470555-50470555|C/G|missense_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'BOD1L1|p.L1167Ffs*9|1|0.15|ENSG00000038219|chr4:13603380-13603399|AATCTGCTGTGCAAGTTCTC/-|frameshift_variant', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 46938 19836 ITPDEFHFV True PC9_epitope_Rep2 1103.5287606873098 1103.52766993586 81.69 2 0.182253886811617 0.0004893964110929853 0.001437320024589706 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 6976 18864 AQLELISRL True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 77.926 2 0.18224027434071408 0.0004893964110929853 0.0014377711689745358 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 46572 5084 ITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1047.56343232431 1047.5623299358601 24.671 2 0.1822309410798832 0.0004893964110929853 0.0014380805738159882 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 105617 9545 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4608749679298 41.723 1 0.18222628530226154 0.0004893964110929853 0.0014382349414004602 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 55136 17955 LAAEFLKQV True PC9_epitope_Rep1 1017.5858816406097 1017.58478993586 73.855 2 0.1822259502347608 0.0004893964110929853 0.00143824605158374 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 133681 19943 VYAPPVGGFSF True PC9_epitope_Rep6 1139.56514619603 1139.56404993586 89.371 2 0.1822250070847905 0.0004893964110929853 0.0014382773250546867 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 116604 22948 TVADVVLWSV True PC9_epitope_Rep3 1087.59136094387 1087.59026993586 93.535 2 0.18222157445717332 0.0004893964110929853 0.001438391151709741 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 124771 15898 VHDEGVWAL True PC9_epitope_Rep6 1024.4977949121999 1024.49668993586 73.431 2 0.1822213131767533 0.0004893964110929853 0.0014383998161932208 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 39108 10190 HHYEGAVVI True PC9_epitope_Rep1 1023.5137793295098 1023.5126899358601 44.074 2 0.18221553963930395 0.0004893964110929853 0.0014385912894280925 ['ENSG00000163655|ENST00000496455|GMPS', 'GMPS|p.G20R|1|0.13|ENSG00000163655|chr3:155893548-155893548|G/C|missense_variant'] 78178 17400 NYATGQWTRF True PC9_epitope_Rep5 1242.57817049122 1242.5770699358602 71.929 2 0.18220422867172412 0.0004893964110929853 0.0014389664796860947 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 52580 21070 KLILLITQV True PC9_epitope_Rep5 1039.7005174700298 1039.69942993586 86.106 2 0.18219812887316245 0.0004893964110929853 0.0014391688536470038 ['ENSG00000163811|ENST00000407426|WDR43'] 71027 15639 LYIVEPLKF True NCI_RA007_Epitope_Rep4 1120.6532329244399 1120.65212993586 67.931 2 0.1821896985278485 0.0004893964110929853 0.0014394485954668623 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 54051 4315 KVIDPVTGK True NCI_RA007_Epitope_Rep4 955.57023157647 955.56912993586 22.941 2 0.1821896769703514 0.0004893964110929853 0.0014394493108731753 ['ENSG00000239789|ENST00000285298|MRPS17'] 35708 8396 GTFDPDNLEK True NCI_RA007_Epitope_Rep4 1134.5193182024198 1134.51822993586 39.11 2 0.18218889288132212 0.0004893964110929853 0.0014394753318652525 ['ENSG00000182154|ENST00000371443|MRPL41'] 137476 9123 YEEDSYSHIMA True H1975_Epitope_Rep1 1343.53398229039 1343.53288993586 39.995 2 0.18218351455156886 0.0004893964110929853 0.0014396538312872074 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 137849 11596 YESEWTNEV True H1975_Epitope_Rep3 1155.47203365683 1155.47092993586 49.735 2 0.1821831673830021 0.0004893964110929853 0.0014396653541000296 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 60436 5487 LGVIEDHSNR True PC9_epitope_Rep5 1138.5730851107799 1138.57144490379 26.116 3 0.182176159947759 0.0004893964110929853 0.0014398979564509016 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 38592 14051 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.54364993586 59.211 2 0.1821724556125476 0.0004893964110929853 0.0014400209320716423 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 34937 4918 GQNPTNAEVLK True NCI_RA007_Epitope_Rep5 1169.6040508858898 1169.6029499358601 25.612 2 0.18217126180461757 0.0004893964110929853 0.0014400605660597936 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 94961 16971 RTLDPLWKV True PC9_epitope_Rep5 1126.6498788795 1126.6487899358601 70.298 2 0.1821694250722723 0.0004893964110929853 0.001440121547038894 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB|p.R866L|1|0.33|ENSG00000198752|chr14:102964631-102964631|C/A|missense_variant'] 47927 13897 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.68958993586 58.291 2 0.18216928054210743 0.0004893964110929853 0.0014401263456654855 ['ENSG00000103479|ENST00000262133|RBL2'] 104780 20821 SQYEEQFVTL True PC9_epitope_Rep1 1242.5768330785397 1242.5757299358602 84.916 2 0.1821679268641979 0.0004893964110929853 0.001440171290658373 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 64531 12836 LPRPQGITV True PC9_epitope_Rep2 979.5814649665099 979.58036993586 54.675 2 0.18216652328875024 0.0004893964110929853 0.0014402178938401938 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 107005 10015 SVFEDPVISK True NCI_RA007_Epitope_Rep4 1119.58119018299 1119.58008993586 45.367 2 0.18216261163927758 0.0004893964110929853 0.0014403477810541576 ['ENSG00000125445|ENST00000245539|MRPS7'] 3919 10237 AHDDGRWSL True PC9_epitope_Rep5 1055.47845644995 1055.47734993586 44.363 2 0.1821531078907031 0.0004893964110929853 0.0014406634041029532 ['ENSG00000075618|ENST00000382361|FSCN1'] 136436 18204 WVDPNSPVL True PC9_epitope_Rep6 1025.51819600361 1025.5170899358602 82.662 2 0.18214613215923905 0.0004893964110929853 0.0014408951148606652 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 138294 7379 YHDEADQSAL True PC9_epitope_Rep1 1147.47818166643 1147.47708993586 33.196 2 0.18213060439976964 0.0004893964110929853 0.0014414110298340624 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 124995 15866 VHYGEVVQL True PC9_epitope_Rep3 1042.54474510462 1042.54364993586 66.179 2 0.1821305752591767 0.0004893964110929853 0.0014414119982139543 ['ENSG00000127080|ENST00000287996|IPPK'] 74769 17927 NHDFQALAL True PC9_epitope_Rep5 1027.50869394907 1027.50758993586 73.973 2 0.18212719651572698 0.0004893964110929853 0.0014415242826834936 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 66051 8573 LSEGVTISYK True NCI_RA007_Epitope_Rep2 1095.58119018299 1095.58008993586 37.992 2 0.18212179654201208 0.0004893964110929853 0.0014417037561125217 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 103580 7799 SPSPPFGHSA True PC9_epitope_Rep5 982.4508447197801 982.44974993586 34.942 2 0.18212138126380406 0.0004893964110929853 0.0014417175592187162 ['ENSG00000141232|ENST00000499247|TOB1'] 17352 19685 EHDAFIFAL True PC9_epitope_Rep6 1061.51819600361 1061.5170899358602 88.377 2 0.18211778483145605 0.0004893964110929853 0.0014418371037485092 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 92364 21084 RLPEIYIQL True PC9_epitope_Rep5 1143.66519459047 1143.6640899358601 86.162 2 0.18211727236660938 0.0004893964110929853 0.0014418541387629152 ['EHD4|p.F425Sfs*51|1|0.18|ENSG00000103966|chr15:41900999-41900999|G/-|frameshift_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 9921 18808 AYLPKILQI True PC9_epitope_Rep6 1057.65356727761 1057.6524699358602 84.987 2 0.1821153647539299 0.0004893964110929853 0.0014419175521231404 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 72484 6055 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep2 1143.50189469691 1143.5007899358602 28.268 2 0.18209026820865937 0.0004893964110929853 0.0014427520783386817 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 71107 20871 LYLKALEGF True PC9_epitope_Rep5 1052.5906326678798 1052.5895299358601 85.333 2 0.182081008887468 0.0004893964110929853 0.0014430600973603927 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 84189 9049 PYKVTQDEL True PC9_epitope_Rep6 1091.54989005471 1091.5487899358602 44.862 2 0.18207912832580073 0.0004893964110929853 0.001443122663858954 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 24123 19535 EYPELRGVF True PC9_epitope_Rep2 1108.5553097883198 1108.5542099358602 80.525 2 0.18207754888535663 0.0004893964110929853 0.0014431752141207375 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 96249 13167 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.60254993586 58.544 2 0.18206622603519326 0.0004893964110929853 0.0014435519978295117 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 68103 12216 LTDPAIVKV True PC9_epitope_Rep6 954.57498260374 954.57388993586 58.359 2 0.18206335549959943 0.0004893964110929853 0.0014436475345863875 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 135116 10115 WEEETVPTTA True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 43.904 2 0.18206322263462282 0.0004893964110929853 0.0014436519567330307 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 42461 10060 IEEDIRDLAA True H1975_Epitope_Rep1 1143.57716743171 1143.57606993586 43.636 2 0.1820590472119417 0.0004893964110929853 0.0014437909342935398 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 6656 18588 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 76.523 2 0.18205741163837774 0.0004893964110929853 0.0014438453774720064 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 74756 16119 NHASLISAL True PC9_epitope_Rep3 924.50288029264 924.50178993586 67.152 2 0.18205696869863155 0.0004893964110929853 0.0014438601219183421 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 5137 19763 ALLPHLYTL True PC9_epitope_Rep4 1039.60661708519 1039.6055299358602 84.142 2 0.18205039014868954 0.0004893964110929853 0.0014440791244913621 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 28823 20733 FSWEGAFQHV True PC9_epitope_Rep5 1206.54580773378 1206.54470993586 84.808 2 0.18204854681532945 0.0004893964110929853 0.00144414049577021 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 137892 9317 YEVRLTQTV True H1975_Epitope_Rep1 1107.59242357303 1107.5913299358601 40.744 2 0.18204483042375094 0.0004893964110929853 0.0014442642359232061 ['ENSG00000187608|ENST00000649529|ISG15'] 68128 12869 LTDPLESSTDY True H1975_Epitope_Rep2 1239.5506779003501 1239.54958993586 54.613 2 0.1820439022067677 0.0004893964110929853 0.0014442951432889722 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-6|OSBPL6'] 77020 21190 NRIDILDSALL True PC9_epitope_Rep2 1241.69795127073 1241.6968499358602 86.963 2 0.1820408815435506 0.0004893964110929853 0.00144439572860824 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 41315 4987 HVVFIAQR True NCI_RA007_Epitope_Rep5 968.55558457184 968.55448993586 25.887 2 0.18203699635139392 0.0004893964110929853 0.0014445251122702366 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 34720 5764 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 27.564 2 0.18203640840593968 0.0004893964110929853 0.0014445446928890327 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 2421 10834 AEQFRLEQI True H1975_Epitope_Rep1 1132.5876725457597 1132.58656993586 46.634 2 0.1820345448469635 0.0004893964110929853 0.0014446067576111504 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 106289 8078 STFNQVVLK True NCI_RA007_Epitope_Rep3 1034.5760452328998 1034.57494993586 38.865 2 0.18203082540110863 0.0004893964110929853 0.0014447306395297009 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 53960 6932 KTYGEIFEK True NCI_RA007_Epitope_Rep1 1113.57062549929 1113.5695299358601 30.967 2 0.18202598924072844 0.0004893964110929853 0.0014448917312787088 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 29840 16506 FVSISDLLVPK True H1975_Epitope_Rep3 1216.7067250492798 1216.70562993586 68.988 2 0.18201765869323366 0.0004893964110929853 0.001445169262725329 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 104905 10781 SRDDNM[Oxidation]FQI True PC9_epitope_Rep6 1140.48697290876 1140.4858699358601 52.3 2 0.18200464237816255 0.0004893964110929853 0.0014456030070417218 ['ENSG00000113387|ENST00000265073|SUB1'] 136868 8799 YADVGGKQF True PC9_epitope_Rep2 983.47124581119 983.47014993586 39.198 2 0.1820040877057072 0.0004893964110929853 0.0014456214933598662 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 62005 20373 LLDPSVFHV True PC9_epitope_Rep2 1025.5545815123298 1025.5534899358602 83.787 2 0.18200100421790838 0.0004893964110929853 0.0014457242652416748 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 76923 20455 NRDQIIFMV True PC9_epitope_Rep5 1134.5855643707798 1134.5844699358602 83.717 2 0.18200003320457167 0.0004893964110929853 0.001445756630390555 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000445336.2_1_X:74804463-74804925:+|nuORF', 'ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 24457 8484 FADQEVRSL True H1975_Epitope_Rep2 1063.52982331647 1063.5287299358602 37.586 2 0.18199551523675397 0.0004893964110929853 0.0014459072297357254 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 117164 16008 TVLEEIGNRV True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 69.508 2 0.18199399561277896 0.0004893964110929853 0.0014459578875415833 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 90289 9433 REELSNVLAA True H1975_Epitope_Rep3 1100.5825871653199 1100.5814899358602 41.286 2 0.18199317910686486 0.0004893964110929853 0.0014459851071136215 ['ENSG00000130255|ENST00000347512|RPL36'] 106232 8131 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 36.225 2 0.1819912124479665 0.0004893964110929853 0.0014460506710411276 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 130212 5786 VSESSDVLPK True H1975_Epitope_Rep3 1059.54480467427 1059.54370993586 27.28 2 0.18197554013309014 0.0004893964110929853 0.0014465732567856928 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 84487 13588 QALLDLHAL True NCI_RA007_Epitope_Rep3 992.5654805492001 992.56438993586 60.746 2 0.18196978216662474 0.0004893964110929853 0.0014467653009197384 ['ENSG00000087086|ENST00000331825|FTL'] 141150 5341 YSSSRSDLY True H1975_Epitope_Rep2 1076.47745339044 1076.47634993586 25.593 2 0.1819683950929512 0.0004893964110929853 0.00144681156748798 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 17758 20573 EHSIATLLL True PC9_epitope_Rep1 995.56514619603 995.56404993586 83.948 2 0.1819572486413156 0.0004893964110929853 0.0014471834170474323 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 62342 15103 LLGINVTDFTR True H1975_Epitope_Rep3 1247.68738658703 1247.68628993586 63.492 2 0.18195515497505818 0.0004893964110929853 0.0014472532731751818 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 64734 14093 LPWQGLKAA True PC9_epitope_Rep6 982.5600012459398 982.55890993586 66.081 2 0.18194399168218803 0.0004893964110929853 0.0014476257985660036 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 118608 12460 TYSEKTTLF True PC9_epitope_Rep4 1088.5389910178399 1088.5378899358602 55.735 2 0.1819373812706374 0.0004893964110929853 0.0014478464370280232 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 49153 2633 KELEKTYSA True NCI_RA007_Epitope_Rep4 1067.54989005471 1067.5487899358602 14.75 2 0.18193589454211467 0.0004893964110929853 0.0014478960648271783 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 87719 6884 QRAITGASL True PC9_epitope_Rep4 915.5137793295099 915.51268993586 33.7 2 0.18192799267135193 0.0004893964110929853 0.0014481598621381556 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 111103 6446 THEDAVAAM True PC9_epitope_Rep5 943.40693130247 943.40582993586 29.768 2 0.18192497143620226 0.0004893964110929853 0.0014482607362599372 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'nc|ENSG00000096746|P31942-6|HNRNPH3', 'ENST00000478698.1_1_10:70098871-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-5|HNRNPH3', 'ENST00000490442.5_1_10:70098233-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-4|HNRNPH3', 'ENST00000469172.5_1_10:70098233-70101808:+|nuORF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF', 'nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1'] 93363 10697 RPYQPLPEA True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 46.093 2 0.18192325319417843 0.0004893964110929853 0.001448318108703908 ['ENSG00000165476|ENST00000373758|REEP3'] 49089 7922 KEIEGIFHA True H1975_Epitope_Rep2 1042.54474510462 1042.54364993586 35.418 2 0.1819161325397733 0.0004893964110929853 0.0014485558930516565 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 108706 11817 SYREDPIVY True PC9_epitope_Rep4 1140.5451390274397 1140.5440499358601 53.221 2 0.18190309422494552 0.0004893964110929853 0.0014489913908353202 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 93115 11368 RPNSLVGITSA True PC9_epitope_Rep2 1113.61422164677 1113.6131299358601 49.048 2 0.18190251212705705 0.0004893964110929853 0.0014490108367705915 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 49405 7374 KEVEQFTQV True H1975_Epitope_Rep3 1106.56078909158 1106.5596899358602 33.342 2 0.18190004094394885 0.0004893964110929853 0.0014490933936095265 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 14463 17056 DTEPPPLLVY True H1975_Epitope_Rep3 1142.5859412102598 1142.5848499358601 71.209 2 0.1818995518601937 0.0004893964110929853 0.001449109733389997 ['ENSG00000174231|ENST00000304992|PRPF8'] 10166 20965 AYVLNIVRF True PC9_epitope_Rep3 1093.62841515893 1093.62730993586 85.922 2 0.18189431135105166 0.0004893964110929853 0.0014492848249473033 ['ATP1B1|p.K203Efs*3|1|0.39|ENSG00000143153|chr1:169130047-169130048|-/G|frameshift_variant', 'nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 94721 5043 RSEEGRLYY True H1975_Epitope_Rep2 1171.56218607391 1171.56108993586 24.48 2 0.1818854855103159 0.0004893964110929853 0.001449579754555672 ['nc|ENSG00000100916|Q5PSV4-2|BRMS1L', 'ENSG00000100916|ENST00000216807|BRMS1L'] 76979 20707 NRFNYPFEL True PC9_epitope_Rep1 1198.5771078620598 1198.5760099358602 84.476 2 0.18188315402825095 0.0004893964110929853 0.0014496576748057434 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 76811 6049 NRAPNTAEL True PC9_epitope_Rep5 984.4988575413599 984.49776993586 28.259 2 0.1818809984773065 0.0004893964110929853 0.0014497297190117985 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 46673 8946 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 39.366 2 0.18187983501251065 0.0004893964110929853 0.0014497686065692 ['ENSG00000170348|ENST00000303575|TMED10'] 115440 14035 TRMPDGPVAL True PC9_epitope_Rep2 1055.54336520563 1055.54226993586 59.264 2 0.18186798739530624 0.0004893964110929853 0.0014501646599312482 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 9617 21396 AYANIISQF True PC9_epitope_Rep1 1025.5181960036098 1025.5170899358602 87.133 2 0.18186102837628546 0.0004893964110929853 0.0014503973431473976 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 57621 11098 LEEDVIYHV True H1975_Epitope_Rep2 1115.5498900547102 1115.5487899358602 47.724 2 0.18185357573702224 0.0004893964110929853 0.0014506465726390908 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 54257 16741 KWNPTAGVAF True PC9_epitope_Rep4 1089.56072952193 1089.5596299358601 72.361 2 0.18184973724355027 0.0004893964110929853 0.001450774955420424 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 48135 20228 IYPEVVHMF True PC9_epitope_Rep2 1133.5579526406098 1133.55684993586 83.225 2 0.18184289752665345 0.0004893964110929853 0.001451003745752266 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 90890 8701 REWGEELQA True NCI_RA007_Epitope_Rep4 1116.5199869087598 1116.5188899358602 40.258 2 0.18184020539702683 0.0004893964110929853 0.0014510938081129044 ['ENSG00000179409|ENST00000319004|GEMIN4'] 31660 7363 GEFSEAIKA True NCI_RA007_Epitope_Rep3 950.4709114580198 950.46980993586 36.087 2 0.18183673864718175 0.0004893964110929853 0.0014512097928279846 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 49524 11205 KFIDTTSKF True PC9_epitope_Rep1 1085.57571087973 1085.57460993586 47.981 2 0.18183145562275474 0.0004893964110929853 0.0014513865612836672 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 134355 10582 VYPEKLATKF True PC9_epitope_Rep4 1194.6648602372995 1194.66322490379 48.444 3 0.18182224292072824 0.0004893964110929853 0.0014516948672241715 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 73868 9673 NASEHIVYL True H1975_Epitope_Rep2 1044.5240096600398 1044.52290993586 42.188 2 0.1818215773747648 0.0004893964110929853 0.0014517171424684823 ['ENSG00000117000|ENST00000372771|RLF'] 77553 12673 NTDNLLTEY True H1975_Epitope_Rep1 1081.49276910141 1081.49166993586 53.8 2 0.18180968401948175 0.0004893964110929853 0.0014521152604728288 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 103179 13453 SPIENIQRVAA True PC9_epitope_Rep5 1196.6513354314802 1196.6502299358601 56.763 2 0.18179969975017263 0.0004893964110929853 0.0014524495582297625 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 69714 8407 LVEIAQVPK True H1975_Epitope_Rep1 995.60153170475 995.60042993586 37.266 2 0.18179660666880673 0.0004893964110929853 0.001452553137804255 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2', 'UGP2|p.I366Nfs*2|1|0.17|ENSG00000169764|chr2:63887424-63887427|TCAT/-|frameshift_variant'] 97174 9544 SDVEAIFSK True H1975_Epitope_Rep1 994.49712620586 994.4965749679301 41.635 1 0.18179549187904837 0.0004893964110929853 0.001452590471145247 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 105034 13307 SRDMTMFVT True PC9_epitope_Rep6 1086.48380172418 1086.4827099358602 62.84 2 0.18178215608750592 0.0004893964110929853 0.0014530371497786982 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 21550 11181 ERNLQSDVL True PC9_epitope_Rep5 1072.55128703704 1072.55018993586 47.996 2 0.18177971729255624 0.0004893964110929853 0.0014531188514235096 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 95923 8349 RYLEKPMEI True NCI_RA007_Epitope_Rep4 1177.6165301458898 1177.6154299358602 38.929 2 0.1817734290125596 0.0004893964110929853 0.0014533295352337629 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 26335 18340 FHQESAVWL True PC9_epitope_Rep5 1115.5399940773498 1115.5388899358602 75.559 2 0.18177323758053768 0.0004893964110929853 0.0014533359494911737 ['ENST00000314423.11_1_16:69166475-69170710:+|nuORF'] 21517 16368 ERMEQMYTL True PC9_epitope_Rep1 1199.53148019259 1199.53038993586 67.779 2 0.1817709910808753 0.0004893964110929853 0.0014534112244256054 ['nc|ENSG00000130762|Q5VV41-2|ARHGEF16', 'ENSG00000130762|ENST00000378378|ARHGEF16', 'ENST00000485984.1_1_1:3389348-3394597:+|nuORF'] 31801 10060 GEIGEEKILP True H1975_Epitope_Rep2 1083.58119018299 1083.58008993586 43.688 2 0.18177018157899508 0.0004893964110929853 0.0014534383498923996 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 73064 13453 MRDPTFVRL True PC9_epitope_Rep2 1133.60154878809 1133.59990490379 57.026 3 0.18176302438660166 0.0004893964110929853 0.0014536782011589674 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 29463 13006 FVEPSRQFV True PC9_epitope_Rep4 1107.5712942056298 1107.57018993586 57.922 2 0.18176233284903734 0.0004893964110929853 0.0014537013780123477 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 73202 20203 MRYVASYLL True PC9_epitope_Rep3 1114.5845017416198 1114.5834099358601 82.969 2 0.18175112539640279 0.0004893964110929853 0.0014540770469635884 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 17122 5209 EGM[Oxidation]NIVEAM[Oxidation]ER True H1975_Epitope_Rep3 1309.5642376337298 1309.5631299358602 25.126 2 0.18173339444372638 0.0004893964110929853 0.0014546715795088327 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 108074 10426 SYANVQDGF True NCI_RA007_Epitope_Rep4 999.4297749220299 999.42927496793 46.956 1 0.1817299157484029 0.0004893964110929853 0.0014547882514307138 ['ENSG00000152766|ENST00000371930|ANKRD22'] 108316 10054 SYISRTNQL True PC9_epitope_Rep3 1080.5563724174801 1080.55526993586 43.629 2 0.1817272656391746 0.0004893964110929853 0.0014548771397057062 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 141534 16458 YTLSKTEFL True PC9_epitope_Rep4 1100.5753765265601 1100.57426993586 71.275 2 0.18172140706970585 0.0004893964110929853 0.0014550736634237633 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 9180 7453 AVLPTPVTK True NCI_RA007_Epitope_Rep4 924.56441792004 924.56332993586 35.311 2 0.18172074004360778 0.0004893964110929853 0.0014550960402737278 ['ENSG00000197724|ENST00000359246|PHF2'] 8180 9398 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51166993586 41.151 2 0.18171937158378648 0.0004893964110929853 0.0014551419493321258 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 86179 9707 QIFNGTFVK True NCI_RA007_Epitope_Rep3 1052.5654805492 1052.5643899358602 45.256 2 0.18171622018069983 0.0004893964110929853 0.001455247678049749 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 87987 12423 QRNEVVVEL True PC9_epitope_Rep4 1084.58767254576 1084.58656993586 55.589 2 0.181715884780023 0.0004893964110929853 0.0014552589311045755 ['ENSG00000186432|ENST00000334256|KPNA4'] 37889 17852 GYSEHFVEF True PC9_epitope_Rep2 1113.47672511445 1113.47562993586 73.968 2 0.1817149735451636 0.0004893964110929853 0.0014552895044581877 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 125164 10371 VIHDNFGIVEG True H1975_Epitope_Rep3 1198.59823722946 1198.5971499358602 44.946 2 0.18170720378300262 0.0004893964110929853 0.0014555502182630868 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 90615 4530 REMPVKVEA True NCI_RA007_Epitope_Rep3 1057.5590152697698 1057.5579099358602 24.687 2 0.1817048783422233 0.0004893964110929853 0.0014556282573589753 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 54933 21538 KYPSPFFVF True PC9_epitope_Rep2 1130.5800679841798 1130.5789699358602 88.313 2 0.18170056373207202 0.0004893964110929853 0.0014557730617782423 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 76991 20772 NRGDFFMTL True PC9_epitope_Rep5 1099.51206507735 1099.5109699358602 84.95 2 0.18169932744903514 0.0004893964110929853 0.0014558145558459783 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 61248 8564 LINNLGTIAK True H1975_Epitope_Rep1 1055.63389446219 1055.63278993586 37.867 2 0.18168318442676626 0.0004893964110929853 0.001456356482027611 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 68065 17272 LTDLVDDNYFY True H1975_Epitope_Rep1 1376.6136125100802 1376.61250993586 71.899 2 0.1816830059679832 0.0004893964110929853 0.0014563624740729236 ['ENSG00000174231|ENST00000304992|PRPF8'] 140878 9811 YSEDHIIGAY True H1975_Epitope_Rep2 1166.5244035828598 1166.5233099358602 42.724 2 0.18168292304724767 0.0004893964110929853 0.0014563652582805509 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 70976 18058 LYGRNFNYL True PC9_epitope_Rep5 1158.5821932425 1158.58108993586 74.474 2 0.1816782307804079 0.0004893964110929853 0.0014565228179748873 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 47275 12304 IVDGDVVHGFY True H1975_Epitope_Rep2 1219.5873381925899 1219.58624993586 52.411 2 0.18167693102154966 0.0004893964110929853 0.0014565664650627518 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 82429 12003 PPPLPPPPP True PC9_epitope_Rep1 907.51673945163 907.51564993586 51.032 2 0.1816768975093117 0.0004893964110929853 0.0014565675904515951 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'ENSG00000135723|ENST00000258201|FHOD1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000090470|ENST00000204549|PDCD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 68160 8418 LTDRELEEY True H1975_Epitope_Rep2 1166.54553295026 1166.54442993586 37.333 2 0.1816734888042062 0.0004893964110929853 0.0014566820641922224 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 77616 5955 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49217496793 27.888 1 0.18167309277917554 0.0004893964110929853 0.0014566953643920541 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 8805 9997 AVDSLVPIGR True H1975_Epitope_Rep1 1025.58694426977 1025.58584993586 43.389 2 0.18166984611197448 0.0004893964110929853 0.0014568044058318548 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 95693 16406 RYFKGPELL True PC9_epitope_Rep5 1121.6233297784897 1121.62222993586 68.104 2 0.18166924256403744 0.0004893964110929853 0.0014568246772852873 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 76393 13377 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52838993586 56.314 2 0.18166541523729568 0.0004893964110929853 0.001456953232851578 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 47158 15511 ITVTSEVPFSK True PC9_epitope_Rep5 1206.6496040959798 1206.6485099358601 64.672 2 0.18165841880282457 0.0004893964110929853 0.0014571882645368146 ['ENSG00000116251|ENST00000234875|RPL22'] 131639 5067 VTLTSEEEAR True H1975_Epitope_Rep3 1133.5564319871298 1133.55532993586 24.61 2 0.18165430462123816 0.0004893964110929853 0.0014573264902489193 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 4320 21071 AIIPYIPTL True PC9_epitope_Rep6 999.60046907559 999.59936993586 93.874 2 0.18164993883995803 0.0004893964110929853 0.001457473183419037 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 44498 21653 ILLKDILSV True PC9_epitope_Rep5 1012.65323292444 1012.65212993586 88.333 2 0.18164611824402738 0.0004893964110929853 0.0014576015701365697 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant', 'ATM|p.L210Wfs*20|1|0.12|ENSG00000149311|chr11:108244081-108244081|T/-|frameshift_variant', 'ATM|p.R250Sfs*3|1|0.24|ENSG00000149311|chr11:108244873-108244874|CG/-|frameshift_variant'] 95414 17993 RWFDKSFTF True PC9_epitope_Rep6 1232.59784330664 1232.59674993586 81.837 2 0.18164335909569915 0.0004893964110929853 0.0014576942951792815 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 39225 18651 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 76.529 2 0.18164272127195005 0.0004893964110929853 0.0014577157309804824 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 131105 12170 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.5222499358601 51.83 2 0.18162811780316118 0.0004893964110929853 0.0014582066066667501 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 69272 22653 LTTLELLEV True PC9_epitope_Rep2 1029.5957776179698 1029.59468993586 92.631 2 0.18162782555049356 0.0004893964110929853 0.0014582164320319335 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 90994 14530 RFEEAHFTF True PC9_epitope_Rep4 1182.5458077337796 1182.54415490379 63.805 3 0.18162190561408048 0.0004893964110929853 0.0014584154711426195 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 140558 19758 YRPPELLL True PC9_epitope_Rep5 999.5753169569099 999.57420993586 81.042 2 0.18161931814242374 0.0004893964110929853 0.00145850247523061 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 142555 20061 YYLNDLERI True PC9_epitope_Rep1 1197.6029882567298 1197.60188993586 81.991 2 0.1816111437757748 0.0004893964110929853 0.0014587773735966125 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 91406 16776 RHIEIFTDL True PC9_epitope_Rep2 1142.6084079903399 1142.60730993586 69.776 2 0.18161015827660185 0.0004893964110929853 0.0014588105187672243 ['ENSG00000079246|ENST00000392132|XRCC5'] 125940 10466 VLDEADLSRY True H1975_Epitope_Rep1 1179.57716743171 1179.57606993586 45.212 2 0.18160471747282866 0.0004893964110929853 0.001458993522224932 ['ENSG00000204970|ENST00000504120|PCDHA1', 'PCDHA1|p.C759Lfs*3|1|0.36|ENSG00000204970|chr5:140788564-140788565|-/T|frameshift_variant', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1', 'PCDHA1|p.R635H|1|0.3|ENSG00000204970|chr5:140788194-140788194|G/A|missense_variant'] 1403 4685 AEEEPNRIPS True H1975_Epitope_Rep3 1140.54111627616 1140.54000993586 23.144 2 0.18160148869842294 0.0004893964110929853 0.0014591021341284172 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 54760 11588 KYNANFVTF True NCI_RA007_Epitope_Rep5 1102.54474510462 1102.54364993586 51.22 2 0.18159292918144948 0.0004893964110929853 0.0014593901047056498 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 114937 9271 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 45.815 2 0.18159083338463283 0.0004893964110929853 0.0014594606229493424 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 47866 10633 IYIAGHPAF True NCI_RA007_Epitope_Rep4 987.51780208079 987.51670993586 47.747 2 0.1815905334494717 0.0004893964110929853 0.0014594707152855487 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 6682 10195 AQAAALYKV True PC9_epitope_Rep1 933.5283667644899 933.52726993586 44.093 2 0.18158575159759527 0.0004893964110929853 0.0014596316263623854 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 142231 12496 YWMHVQNTF True NCI_RA007_Epitope_Rep5 1224.53861417836 1224.53750993586 54.723 2 0.18158338874236188 0.0004893964110929853 0.0014597111438733354 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 9917 21054 AYLPKILQI True PC9_epitope_Rep1 1057.65356727761 1057.6524699358602 85.815 2 0.18157349018352537 0.0004893964110929853 0.0014600443086974966 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 118290 21569 TYLPTSPLL True PC9_epitope_Rep1 1003.55899818643 1003.55790993586 87.786 2 0.18157024896190346 0.0004893964110929853 0.0014601534180089272 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 76755 8540 NQWDGTQHGV True PC9_epitope_Rep1 1140.49483479008 1140.49372993586 37.687 2 0.1815673456515571 0.0004893964110929853 0.001460251159142894 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 117558 18106 TVSIIDRF True PC9_epitope_Rep3 949.5232813840499 949.52218993586 74.84 2 0.18156327879853776 0.0004893964110929853 0.001460388082441779 ['ENSG00000134057|ENST00000256442|CCNB1', 'nc|ENSG00000134057|P14635-2|CCNB1'] 138586 16656 YIDKDLEYV True PC9_epitope_Rep5 1156.56520576568 1156.5641099358602 69.073 2 0.18156118402281898 0.0004893964110929853 0.001460458614623531 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'ENST00000509067.1_1_5:31409161-31409425:-|nuORF'] 115030 15158 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 63.127 2 0.18154480615363222 0.0004893964110929853 0.0014610101836303013 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 61106 19278 LIIDENGVHEL True PC9_epitope_Rep3 1250.65066672514 1250.6495699358602 79.374 2 0.1815422912392972 0.0004893964110929853 0.0014610948986518379 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 7564 9061 ASEPSAQLSY True H1975_Epitope_Rep2 1051.4822044177101 1051.48110993586 39.806 2 0.1815287098384609 0.0004893964110929853 0.0014615524739216917 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF'] 48064 23301 IYMDTLNIF True PC9_epitope_Rep1 1128.5525329069999 1128.5514299358601 94.415 2 0.18152460068761841 0.0004893964110929853 0.001461690944913812 ['ENSG00000165678|ENST00000372134|GHITM'] 91552 17175 RIIDVVYNA True PC9_epitope_Rep3 1061.58694426977 1061.58584993586 71.222 2 0.18152142515861472 0.0004893964110929853 0.0014617979635338887 ['ENSG00000142937|ENST00000396651|RPS8'] 72859 11300 MPQSGTGVSV True PC9_epitope_Rep1 961.45388149489 961.45333496793 48.344 1 0.1815194391487022 0.0004893964110929853 0.0014618648981177104 ['ENSG00000115233|ENST00000409682|PSMD14'] 108833 19924 SYVRSLPFF True PC9_epitope_Rep4 1114.5811306133398 1114.58002993586 84.772 2 0.18151720211678196 0.0004893964110929853 0.0014619402965856709 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 140823 5126 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 24.793 2 0.1815132180137094 0.0004893964110929853 0.0014620745891955169 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 70981 19124 LYHDIFSRL True PC9_epitope_Rep1 1162.61349337078 1162.6123899358602 78.35 2 0.1815038851734835 0.0004893964110929853 0.0014623892206833272 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 34812 20473 GQIDLLERL True PC9_epitope_Rep3 1055.59750895347 1055.59640993586 84.007 2 0.18149262374865457 0.0004893964110929853 0.0014627689595113347 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.N627Kfs*7|1|0.66|ENSG00000134982|chr5:112835084-112835085|-/A|frameshift_variant', 'APC|p.R805Dfs*15|1|0.71|ENSG00000134982|chr5:112838007-112838007|C/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 95931 7935 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.6154299358602 37.212 2 0.18149118598595207 0.0004893964110929853 0.001462817448439058 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 8529 4251 ATTAIAIHR True NCI_RA007_Epitope_Rep4 952.5454138109599 952.54430993586 22.676 2 0.18148659294265673 0.0004893964110929853 0.0014629723608309685 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF'] 131056 14369 VTDSGPTFNYL True H1975_Epitope_Rep2 1212.56626839484 1212.56516993586 60.42 2 0.18148528238362985 0.0004893964110929853 0.0014630165658743902 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 21483 7799 ERLKEAYSV True PC9_epitope_Rep1 1093.57677350889 1093.57566993586 34.823 2 0.18148038918635817 0.0004893964110929853 0.0014631816248256073 ['ENSG00000174231|ENST00000304992|PRPF8'] 78274 17163 NYIEKVVAI True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 74.023 2 0.18147723337079946 0.0004893964110929853 0.0014632880877390028 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 47898 15141 IYIKHPHLF True PC9_epitope_Rep1 1166.66004964038 1166.6584049037901 63.062 3 0.18147589950847576 0.0004893964110929853 0.0014633330885417916 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 47894 9074 IYIKHPHLF True NCI_RA007_Epitope_Rep4 1166.66004964038 1166.6584049037901 41.737 3 0.18147516217579748 0.0004893964110929853 0.0014633579646895548 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 118296 20622 TYLPTSPLL True PC9_epitope_Rep4 1003.55899818643 1003.55790993586 87.478 2 0.1814713470580666 0.0004893964110929853 0.0014634866859925824 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 13828 15057 DQLIYNLLK True H1975_Epitope_Rep3 1118.63356010902 1118.6324699358602 63.31 2 0.18146412888014027 0.0004893964110929853 0.0014637302569001339 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 93467 19997 RQIDQFLVV True PC9_epitope_Rep5 1116.62914343492 1116.6280499358602 81.972 2 0.18145454945816822 0.0004893964110929853 0.0014640535685843637 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 71432 18520 LYTEKFEEF True PC9_epitope_Rep3 1204.5652057656796 1204.5641099358602 76.455 2 0.1814525141616383 0.0004893964110929853 0.00146412227037418 ['ENSG00000084652|ENST00000373610|TXLNA'] 142608 14461 YYLTPDGQRF True PC9_epitope_Rep6 1258.59823722946 1258.5971499358602 67.513 2 0.1814502844563685 0.0004893964110929853 0.0014641975381728693 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 115110 9008 TRDETNYGI True PC9_epitope_Rep5 1067.4883524273098 1067.48724993586 39.595 2 0.1814398118361721 0.0004893964110929853 0.0014645511125860582 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 43714 10126 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 44.287 2 0.18143517252232835 0.0004893964110929853 0.0014647077714727212 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 29531 21863 FVHDLVLYL True PC9_epitope_Rep1 1117.6171817688898 1117.6160899358601 88.908 2 0.18142633544712425 0.0004893964110929853 0.0014650062254958573 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 134423 14321 VYPLMKEYF True NCI_RA007_Epitope_Rep4 1188.5889184157197 1188.58782993586 62.392 2 0.18142566401195012 0.0004893964110929853 0.001465028904327303 ['ENSG00000100109|ENST00000407690|TFIP11'] 40605 15354 HRIFEPNCL True PC9_epitope_Rep5 1127.5545985956699 1127.5535099358601 64.068 2 0.1814123987223295 0.0004893964110929853 0.0014654770335188 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF'] 106124 9371 STDKAEYTFY True H1975_Epitope_Rep3 1223.53463391339 1223.53352993586 41.045 2 0.18140861782576478 0.0004893964110929853 0.0014656047852530296 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 75846 10125 NLPLPPPPPPR True NCI_RA007_Epitope_Rep2 1193.6920780446499 1193.6909899358602 43.972 2 0.18140766752726264 0.0004893964110929853 0.0014656368963976297 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 28916 11868 FTDIDGQVY True H1975_Epitope_Rep2 1056.4763907612798 1056.47587496793 50.728 1 0.18140534097636948 0.0004893964110929853 0.001465715514894608 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 66224 4671 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 23.063 2 0.1813905737970212 0.0004893964110929853 0.0014662146239855448 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 140377 20185 YRDQQLLLL True PC9_epitope_Rep3 1160.6553581827598 1160.6542699358602 82.899 2 0.18138917321411566 0.0004893964110929853 0.0014662619704827302 ['ENSG00000123684|ENST00000366997|LPGAT1'] 134822 14980 VYTYIQSRF True PC9_epitope_Rep4 1175.5975089534697 1175.59640993586 65.559 2 0.1813852431239868 0.0004893964110929853 0.0014663948347767033 ['DYRK2|p.A390*|1|0.05|ENSG00000127334|chr12:67658074-67658075|-/TA|frameshift_variant', 'DYRK2|p.P391Efs*19|1|0.04|ENSG00000127334|chr12:67658076-67658077|-/CGAGGTTTGTAGAGGT|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 104326 8671 SQIQEFKEA True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 38.304 2 0.18138257925194465 0.0004893964110929853 0.0014664848989800112 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 33405 13506 GLADNTVIAKV True PC9_epitope_Rep6 1099.62372370131 1099.62262993586 63.662 2 0.18137980971324785 0.0004893964110929853 0.001466578541597735 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 73061 9983 MRDPQTEEF True PC9_epitope_Rep5 1151.49172355559 1151.4906299358602 43.375 2 0.181378553040363 0.0004893964110929853 0.001466621033732433 ['ENSG00000102241|ENST00000218364|HTATSF1'] 96355 18475 RYSVFFQSL True PC9_epitope_Rep6 1145.58694426977 1145.58584993586 83.705 2 0.18137073380258892 0.0004893964110929853 0.0014668854549214755 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 49538 11410 KFIDTTSKF True PC9_epitope_Rep5 1085.57571087973 1085.57460993586 48.888 2 0.18136312377099384 0.0004893964110929853 0.001467142847306041 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 92724 4884 RNVSTGDVNVE True NCI_RA007_Epitope_Rep5 1188.5734790335998 1188.5723899358602 25.48 2 0.18136293416713228 0.0004893964110929853 0.0014671492608125095 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 1927 13559 AEILELAGNAA True H1975_Epitope_Rep2 1070.5607890915799 1070.56027496793 57.292 1 0.18136291560129195 0.0004893964110929853 0.001467149888818831 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 46939 20094 ITPDEFHFV True PC9_epitope_Rep3 1103.5287606873098 1103.52766993586 82.543 2 0.1813608976266195 0.0004893964110929853 0.001467218150240738 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 110002 5017 TEINSQRIAA True H1975_Epitope_Rep2 1101.5778361380499 1101.5767299358602 24.38 2 0.1813578879193427 0.0004893964110929853 0.0014673199646155015 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 34873 20549 GQLEFRALL True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 83.854 2 0.18135428905829218 0.0004893964110929853 0.001467441718568598 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 87946 20475 QRLINLVGESL True PC9_epitope_Rep3 1240.7139356880398 1240.71282993586 84.015 2 0.1813540582310706 0.0004893964110929853 0.0014674495280865352 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 87805 16403 QRDVLLTEL True PC9_epitope_Rep6 1085.60807363717 1085.6069699358602 75.488 2 0.18135174632160386 0.0004893964110929853 0.0014675277486214243 ['ENSG00000124659|ENST00000372876|TBCC'] 84443 8722 QAFAQVFNK True NCI_RA007_Epitope_Rep3 1051.5450794577898 1051.54398993586 41.395 2 0.18134734872289915 0.0004893964110929853 0.001467676547347079 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 108551 17530 SYNEHWNYL True PC9_epitope_Rep5 1224.5199869087598 1224.5188899358602 72.434 2 0.18134347850612648 0.0004893964110929853 0.0014678075138952337 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 140705 7281 YSADREDLY True H1975_Epitope_Rep2 1130.48801807414 1130.4869299358602 32.944 2 0.18132957580498432 0.0004893964110929853 0.0014682780721919017 ['ENSG00000174231|ENST00000304992|PRPF8'] 88824 21251 QVADILFQTA True PC9_epitope_Rep2 1104.5815245361598 1104.5804299358601 87.203 2 0.18132790839225638 0.0004893964110929853 0.0014683345184899 ['ENSG00000114491|ENST00000232607|UMPS', 'UMPS|p.I201Lfs*14|1|0.09|ENSG00000114491|chr3:124737857-124737858|-/CTCCTGG|frameshift_variant'] 17445 6779 EHDTTEYKL True PC9_epitope_Rep5 1134.51931820242 1134.51822993586 31.046 2 0.18132186625013128 0.0004893964110929853 0.001468539079077725 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 11739 12008 DHASIQMNV True PC9_epitope_Rep3 1013.46002950449 1013.4589299358599 51.215 2 0.18131774872303677 0.0004893964110929853 0.0014686784969519691 ['ENSG00000171858|ENST00000343986|RPS21'] 138359 16294 YHFPDQQEL True PC9_epitope_Rep5 1175.52473793603 1175.52364993586 67.668 2 0.18130895494827634 0.0004893964110929853 0.0014689762951717211 ['ENSG00000165490|ENST00000533655|DDIAS', 'DDIAS|p.P901T|1|0.37|ENSG00000165490|chr11:82934039-82934039|C/A|missense_variant'] 65573 12894 LRSDSYVEL True PC9_epitope_Rep4 1080.54513902744 1080.5440499358601 57.475 2 0.1813081800363593 0.0004893964110929853 0.0014690025402032505 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 76761 8653 NQWDGTQHGV True PC9_epitope_Rep3 1140.49483479008 1140.49372993586 38.235 2 0.18130232186157008 0.0004893964110929853 0.001469200962448195 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 75399 18566 NIVDKFVIV True PC9_epitope_Rep6 1045.61718176889 1045.6160899358601 84.054 2 0.18130183394307586 0.0004893964110929853 0.0014692174899475015 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 111000 13009 THASQIELL True PC9_epitope_Rep4 1010.5396597241798 1010.53856993586 57.934 2 0.18130163804942426 0.0004893964110929853 0.001469224125600385 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 141868 15403 YVDPQFLTY True H1975_Epitope_Rep3 1144.54407639828 1144.54357496793 64.659 1 0.18129850383809362 0.0004893964110929853 0.0014693302971801026 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 107389 9246 SVLLFVTKK True NCI_RA007_Epitope_Rep4 1033.65356727761 1033.6524699358602 42.418 2 0.18128735081152295 0.0004893964110929853 0.0014697081689180153 ['ENSG00000198231|ENST00000389924|DDX42', 'nc|ENSG00000198231|Q86XP3-2|DDX42', 'ENST00000578593.1_1_17:61889231-61895755:+|nuORF'] 73199 13536 MRYVASYLL True NCI_RA007_Epitope_Rep4 1114.5845017416198 1114.5834099358601 59.273 2 0.18128669204263953 0.0004893964110929853 0.0014697304914782071 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 75602 13593 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.50207496793 57.422 1 0.18128219274621685 0.0004893964110929853 0.0014698829604272053 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 97616 4426 SEEYPNKPP True H1975_Epitope_Rep3 1059.48728979815 1059.48618993586 22.146 2 0.18127529496702602 0.0004893964110929853 0.0014701167382234342 ['ENSG00000119048|ENST00000265339|UBE2B'] 138594 5757 YIDQEELNK True H1975_Epitope_Rep3 1150.5506183307 1150.5495299358602 27.17 2 0.18126339012867318 0.0004893964110929853 0.0014705203016464902 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 98009 12974 SEQEHFLIVP True H1975_Epitope_Rep2 1197.6029882567298 1197.60188993586 55.019 2 0.1812593684718398 0.0004893964110929853 0.0014706566573146557 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 29699 22167 FVLPILQKL True PC9_epitope_Rep5 1069.68995278633 1069.6888499358602 90.302 2 0.1812553876498985 0.0004893964110929853 0.0014707916409380805 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 34870 10274 GQLDTPGVHNV True PC9_epitope_Rep3 1135.56218607391 1135.56108993586 44.468 2 0.1812548210971408 0.0004893964110929853 0.001470810852890326 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 7133 17251 AQWHEQILV True PC9_epitope_Rep3 1122.5821932425 1122.58108993586 71.508 2 0.1812537997717296 0.0004893964110929853 0.0014708454869374536 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 17761 19409 EHSIATLLL True PC9_epitope_Rep4 995.56514619603 995.56404993586 82.767 2 0.1812505553543928 0.0004893964110929853 0.0014709555134171804 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 68024 9090 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60717496793 39.868 1 0.18124901372210298 0.0004893964110929853 0.0014710077969964522 ['ENSG00000167658|ENST00000309311|EEF2'] 54821 16961 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 70.103 2 0.1812420817408587 0.0004893964110929853 0.0014712429141954097 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 877 9155 ADIEM[Oxidation]PFDPSK True H1975_Epitope_Rep1 1264.5645545231198 1264.56344993586 40.121 2 0.18124188126736185 0.0004893964110929853 0.0014712497143653251 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 2154 8340 AELQRLVAA True H1975_Epitope_Rep2 969.5607295219298 969.55962993586 37.032 2 0.18123961825281068 0.0004893964110929853 0.0014713264792325224 ['ENSG00000150779|ENST00000504148|TIMM8B'] 40356 5920 HQRLEPATL True NCI_RA007_Epitope_Rep4 1063.57744221523 1063.5763499358602 29.393 2 0.1812368841945647 0.0004893964110929853 0.0014714192279656117 ['SEC22A|p.S256Ffs*16|1|0.09|ENSG00000121542|chr3:123271564-123271565|TC/-|frameshift_variant', 'ENSG00000121542|ENST00000492595|SEC22A'] 96240 9795 RYQDIIHSI True NCI_RA007_Epitope_Rep4 1143.6036569630699 1143.60254993586 44.526 2 0.18123209120674363 0.0004893964110929853 0.0014715818368639438 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 7200 11192 AQYLINARL True NCI_RA007_Epitope_Rep4 1060.60292868708 1060.60182993586 49.936 2 0.18121910840763647 0.0004893964110929853 0.0014720223871524827 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3', 'PCBP1|p.S349F|1|0.19|ENSG00000169564|chr2:70088789-70088789|C/T|missense_variant'] 40724 8035 HRTDSEIAL True PC9_epitope_Rep5 1040.5250722892 1040.5239699358601 35.844 2 0.18121824354244492 0.0004893964110929853 0.0014720517396482756 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 48421 19408 IYVPDIRNVF True PC9_epitope_Rep6 1234.6710082469 1234.66990993586 87.309 2 0.18121371516016174 0.0004893964110929853 0.0014722054371305382 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 88923 19468 QVFPGLLERV True PC9_epitope_Rep4 1156.6604435631998 1156.65934993586 83.0 2 0.18121035847592834 0.0004893964110929853 0.0014723193764742337 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 48286 10409 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65880490379 47.742 3 0.1812081300902463 0.0004893964110929853 0.001472395021713483 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 140496 13814 YRLLPGPSA True PC9_epitope_Rep2 972.5392658013599 972.53816993586 58.419 2 0.18120443729316002 0.0004893964110929853 0.0014725203867376373 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 85852 20084 QHFDAAYIF True PC9_epitope_Rep5 1110.5134449763398 1110.5123499358601 82.303 2 0.1811985427318541 0.0004893964110929853 0.0014727205205769297 ['ENSG00000023608|ENST00000216294|SNAPC1'] 5184 23364 ALMDLLLRL True PC9_epitope_Rep5 1056.63653731448 1056.6354299358602 94.854 2 0.1811972478547357 0.0004893964110929853 0.0014727644882679264 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2'] 136915 14258 YAFVRPVIL True H1975_Epitope_Rep2 1076.6382515666398 1076.6371499358602 59.993 2 0.18118300233289364 0.0004893964110929853 0.0014732482833207331 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000565302.5_1_16:733531-734319:-|nuORF', 'ENST00000569441.5_1_16:733170-733950:-|nuORF', 'ENST00000568689.5_1_16:733170-734340:-|nuORF'] 29666 21125 FVLDKVPFL True PC9_epitope_Rep4 1076.6270181766 1076.62592993586 89.42 2 0.18118194566843526 0.0004893964110929853 0.001473284175259564 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 70881 16411 LYEEKFESI True PC9_epitope_Rep3 1156.5652057656798 1156.5641099358602 68.262 2 0.1811770278083937 0.0004893964110929853 0.0014734512327505037 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.D1423Gfs*6|1|0.12|ENSG00000181555|chr3:47120368-47120369|-/C|frameshift_variant'] 109658 10430 TEAPVPVSV True H1975_Epitope_Rep1 897.4807478657299 897.4801949679301 45.073 1 0.18117237061068417 0.0004893964110929853 0.0014736094531571406 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 49190 7250 KEMENFEAP True NCI_RA007_Epitope_Rep3 1093.4750108622898 1093.47390993586 35.627 2 0.1811670994196558 0.0004893964110929853 0.0014737885534849106 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 34696 7190 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.048 2 0.18116220228340557 0.0004893964110929853 0.0014739549640212166 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 131651 6977 VTLTSEEEAR True PC9_epitope_Rep3 1133.5564319871298 1133.55532993586 31.849 2 0.18115965864358932 0.0004893964110929853 0.001474041407367943 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 83260 8826 PTAEDNLEY True H1975_Epitope_Rep2 1050.4505699362599 1050.4494699358602 38.916 2 0.1811547820429959 0.0004893964110929853 0.001474207148525548 ['ENSG00000099942|ENST00000354336|CRKL'] 117948 14970 TYADTLNHL True PC9_epitope_Rep1 1046.5032742154601 1046.5021699358601 62.402 2 0.18115402912885553 0.0004893964110929853 0.0014742327395029617 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 99728 13416 SIIDDRVIL True NCI_RA007_Epitope_Rep4 1042.60225998074 1042.60116993586 58.785 2 0.18114782330965126 0.0004893964110929853 0.0014744436875196467 ['ENSG00000165475|ENST00000298248|CRYL1', 'nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'CRYL1|p.H161Tfs*15|1|0.41|ENSG00000165475|chr13:20432254-20432254|G/-|frameshift_variant'] 58383 9112 LENLVNQAA True H1975_Epitope_Rep2 970.5083595959 970.50781496793 40.001 1 0.18114623943567146 0.0004893964110929853 0.0014744975313598816 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 8920 12713 AVFPSIVGRPR True PC9_epitope_Rep2 1197.69822605425 1197.6965849037902 54.205 3 0.18114171187313236 0.0004893964110929853 0.001474651456840324 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 23927 14488 EYLERAPEL True PC9_epitope_Rep2 1118.5607890915799 1118.5596899358602 60.998 2 0.18113911254631582 0.0004893964110929853 0.001474739834540897 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 25766 6397 FETLQAQAGK True NCI_RA007_Epitope_Rep1 1091.5611234447497 1091.56002993586 28.908 2 0.18113848616901973 0.0004893964110929853 0.0014747611323043578 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 68122 11707 LTDPIQGTEY True H1975_Epitope_Rep2 1135.53971929383 1135.5386299358602 50.106 2 0.18113841388557306 0.0004893964110929853 0.0014747635900693235 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 31997 5513 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 26.257 2 0.181137961188216 0.0004893964110929853 0.0014747789826730442 ['ENSG00000108344|ENST00000264639|PSMD3'] 71265 20370 LYPQFM[Oxidation]FHL True PC9_epitope_Rep4 1210.5845021220598 1210.5834099358601 86.498 2 0.18113369199086005 0.0004893964110929853 0.0014749241517275553 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 136431 20269 WVDPNSPVL True PC9_epitope_Rep3 1025.51819600361 1025.5170899358602 83.221 2 0.18113307553985544 0.0004893964110929853 0.0014749451146046917 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 17406 8904 EHDPRVITV True PC9_epitope_Rep5 1064.56145779792 1064.56036993586 39.193 2 0.18112535909840083 0.0004893964110929853 0.001475207543221123 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 56803 9755 LDNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1089.57399700801 1089.57288993586 42.452 2 0.18112346124127043 0.0004893964110929853 0.0014752720946513266 ['CON__P00761', 'nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 90671 5520 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 26.245 2 0.18111423634833315 0.0004893964110929853 0.001475585899379957 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 1511 6237 AEEMETGNVA True H1975_Epitope_Rep3 1049.4335399731299 1049.4324499358602 29.002 2 0.18110570239272705 0.0004893964110929853 0.001475876259931137 ['ENSG00000162783|ENST00000367577|IER5'] 120418 8553 VEEPGELEA True H1975_Epitope_Rep2 971.4447562798299 971.4442049679301 37.854 1 0.18110217964611444 0.0004893964110929853 0.0014759961350686393 ['ENSG00000275183|ENST00000611161|LENG9', 'nc|ENSG00000275183|Q96B70|LENG9'] 137545 12138 YEELQITAGR True PC9_epitope_Rep2 1178.5931518490197 1178.5920499358601 51.998 2 0.18109950230064384 0.0004893964110929853 0.0014760872486731076 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 11286 20724 DEHLQLISL True PC9_epitope_Rep2 1066.56587447202 1066.56476993586 85.152 2 0.18109795739719708 0.0004893964110929853 0.0014761398263430801 ['ENSG00000163918|ENST00000296273|RFC4'] 128411 8366 VPRPPDTVST True PC9_epitope_Rep5 1067.56112344475 1067.56002993586 37.123 2 0.18109671825670795 0.0004893964110929853 0.0014761819993441927 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 26317 19579 FHNELLTQL True PC9_epitope_Rep3 1113.5818588893299 1113.5807699358602 80.545 2 0.18109628990406476 0.0004893964110929853 0.001476196578211234 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 125925 19405 VLDDKLVFV True PC9_epitope_Rep4 1046.60119735158 1046.60010993586 82.752 2 0.18109408459649537 0.0004893964110929853 0.0014762716375447097 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 76523 19380 NQINGSFAL True PC9_epitope_Rep3 962.48214484806 962.48159496793 79.769 1 0.1810926035381342 0.0004893964110929853 0.0014763220486476655 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 17898 11926 EHYYNAISV True PC9_epitope_Rep6 1094.50327421546 1094.5021699358601 57.115 2 0.1810893986744767 0.0004893964110929853 0.0014764311391877206 ['ENSG00000198730|ENST00000361367|CTR9'] 15082 20947 DYSSILQKF True PC9_epitope_Rep5 1099.55497543515 1099.5538699358601 85.63 2 0.18108911547684722 0.0004893964110929853 0.0014764407793566483 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 31408 8373 GDYPLEAVR True H1975_Epitope_Rep1 1018.5083595959 1018.50726993586 37.134 2 0.181087736275846 0.0004893964110929853 0.0014764877288525238 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 55221 10501 LADDSVRSL True PC9_epitope_Rep3 974.50327421546 974.50216993586 45.331 2 0.18108537020842683 0.0004893964110929853 0.0014765682758344854 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 72117 17956 M[Oxidation]FLSFPTTK True PC9_epitope_Rep1 1086.54196860374 1086.5408699358602 73.859 2 0.18108337222425797 0.0004893964110929853 0.0014766362957504638 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 134162 12844 VYLPLTSHI True NCI_RA007_Epitope_Rep4 1041.58588164061 1041.58478993586 56.486 2 0.1810825677338145 0.0004893964110929853 0.0014766636849283007 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 54994 11307 KYQIINEEF True NCI_RA007_Epitope_Rep4 1182.5920892198599 1182.59098993586 50.388 2 0.18107651468183675 0.0004893964110929853 0.0014768697796691134 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 29564 20598 FVIDLQTRL True PC9_epitope_Rep5 1103.63389446219 1103.63278993586 84.276 2 0.18107611987685931 0.0004893964110929853 0.0014768832230179936 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 11461 7694 DFDTYDDR True NCI_RA007_Epitope_Rep1 1045.39886871657 1045.3977699358602 33.922 2 0.18106720008019112 0.0004893964110929853 0.0014771869801826242 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF', 'nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H'] 37514 19794 GVVDPRAISVL True PC9_epitope_Rep5 1124.65535818276 1124.6542699358602 81.183 2 0.18106321010557955 0.0004893964110929853 0.0014773228761178075 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 49076 5555 KEIEELQSQA True NCI_RA007_Epitope_Rep3 1173.58773211541 1173.5866299358602 28.844 2 0.18105926556688662 0.0004893964110929853 0.0014774572368484208 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 4422 9013 AIQLPISSK True NCI_RA007_Epitope_Rep5 955.5702315764701 955.56912993586 41.327 2 0.18105848676374434 0.0004893964110929853 0.0014774837662543433 ['ENST00000518468.1_3_8:53599460-53658116:-|nuORF'] 9068 16498 AVIDVGINRV True PC9_epitope_Rep3 1054.61349337078 1054.6123899358602 68.596 2 0.18105586774537727 0.0004893964110929853 0.001477572984857274 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 141290 8637 YTDMESEDY True H1975_Epitope_Rep3 1151.39648575807 1151.39597496793 38.218 1 0.18105513942896956 0.0004893964110929853 0.0014775977963994735 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 132584 8558 VVESAYEVIK True H1975_Epitope_Rep1 1135.6124903112698 1135.6113899358602 37.844 2 0.181053777196703 0.0004893964110929853 0.0014776442046626386 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 134883 16047 VYVQHPITF True PC9_epitope_Rep5 1102.5811306133398 1102.58002993586 66.713 2 0.1810484918083214 0.0004893964110929853 0.0014778242800694249 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 111320 14028 THNIIVNQL True PC9_epitope_Rep1 1050.5821932425 1050.58108993586 58.797 2 0.18104822855437222 0.0004893964110929853 0.0014778332498171184 ['ENSG00000198356|ENST00000357332|GET3'] 5480 17550 ALWERIEGV True PC9_epitope_Rep6 1071.5712942056298 1071.57018993586 80.145 2 0.18104635178287593 0.0004893964110929853 0.0014778971978907048 ['ENSG00000100065|ENST00000251973|CARD10'] 104126 4042 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 21.808 2 0.181044310202884 0.0004893964110929853 0.0014779667647062185 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 22414 3725 ETEKM[Oxidation]IEKY True H1975_Epitope_Rep3 1185.5587408666897 1185.55708490379 19.395 3 0.18104058734489756 0.0004893964110929853 0.0014780936294973097 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 75137 15957 NHYNNIMAL True PC9_epitope_Rep1 1088.50731405008 1088.5062099358602 66.188 2 0.18103247570289516 0.0004893964110929853 0.0014783700898004643 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 106233 8224 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 36.587 2 0.1810324144767737 0.0004893964110929853 0.0014783721767009956 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 76756 8639 NQWDGTQHGV True PC9_epitope_Rep1 1140.49483479008 1140.49372993586 38.068 2 0.18103197024835524 0.0004893964110929853 0.0014783873183744141 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 17778 16886 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.51708993586 72.936 2 0.18102695937972801 0.0004893964110929853 0.0014785581262605867 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 9819 18476 AYLEAIHNF True PC9_epitope_Rep1 1076.52909504048 1076.52857496793 75.86 1 0.1810131549428732 0.0004893964110929853 0.001479028787008141 ['ENSG00000042753|ENST00000263270|AP2S1'] 87878 14582 QRIDEFEAM True PC9_epitope_Rep2 1137.5124590001699 1137.51136993586 61.359 2 0.18099662694189844 0.0004893964110929853 0.0014795925048390044 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 76542 19953 NQITQLESL True PC9_epitope_Rep2 1044.54513902744 1044.54457496793 82.148 1 0.18098885108254384 0.0004893964110929853 0.0014798577892631702 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 133541 18740 VWSDVTPLTF True NCI_RA007_Epitope_Rep2 1163.58627556343 1163.5857749679299 77.693 1 0.1809851744435589 0.0004893964110929853 0.0014799832395882898 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 7212 8961 ARADSYYEY True PC9_epitope_Rep4 1136.47745339044 1136.47634993586 42.015 2 0.18098458370100864 0.0004893964110929853 0.00148000339726441 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000480100.3_1_9:140000303-140000768:+|nuORF', 'ENST00000535028.5_1_9:140000303-140001810:+|nuORF'] 41407 17482 HYGLPVVV True PC9_epitope_Rep2 882.49633836022 882.49524993586 72.5 2 0.1809813001051866 0.0004893964110929853 0.0014801154471296809 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 36242 13861 GVDLTGPQLY True H1975_Epitope_Rep2 1061.53932537101 1061.53822993586 58.461 2 0.1809733605782885 0.0004893964110929853 0.0014803864117364333 ['ENSG00000205220|ENST00000358514|PSMB10'] 43199 21923 IFIDPGYQTF True PC9_epitope_Rep5 1199.58627556343 1199.5851699358602 89.369 2 0.18096895012917952 0.0004893964110929853 0.001480536955478947 ['ENSG00000121741|ENST00000610343|ZMYM2'] 98149 3702 SESPKEPEQLR True H1975_Epitope_Rep3 1298.64664397386 1298.6449949037901 19.299 3 0.18096540392843005 0.0004893964110929853 0.001480658010587902 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 95883 7820 RYLDKTEQW True NCI_RA007_Epitope_Rep2 1237.6091362663299 1237.60750490379 35.048 3 0.18095957436536464 0.0004893964110929853 0.0014808570333925519 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 44531 9052 ILMEHIHKL True PC9_epitope_Rep4 1132.64268532408 1132.64104490379 42.393 3 0.18095663670327863 0.0004893964110929853 0.0014809573360994735 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 76503 18113 NQIIKLENL True PC9_epitope_Rep1 1083.62880908175 1083.6277099358601 74.464 2 0.1809536087813248 0.0004893964110929853 0.0014810607277378157 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 109839 10147 TEELAYLK True PC9_epitope_Rep6 965.50696261357 965.50586993586 49.652 2 0.1809512132288129 0.0004893964110929853 0.0014811425315684982 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 137659 11678 YEILTPNSIPK True NCI_RA007_Epitope_Rep1 1273.69180326113 1273.69070993586 49.399 2 0.18094967046455052 0.0004893964110929853 0.0014811952166033202 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 140672 16863 YRVFTTQEL True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 69.688 2 0.18094680856695755 0.0004893964110929853 0.0014812929547018618 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 45983 6917 ISETYDLK True NCI_RA007_Epitope_Rep2 967.48622716899 967.48512993586 31.526 2 0.18094210406491434 0.0004893964110929853 0.0014814536345501177 ['CON__P34955'] 6834 19035 AQFEHTILL True PC9_epitope_Rep3 1070.5760452329 1070.57494993586 78.439 2 0.18093977540461556 0.0004893964110929853 0.0014815331752064639 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 116245 19759 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.54357496793 81.975 1 0.18093887428109137 0.0004893964110929853 0.0014815639562656506 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 34662 14250 GQDEPLIHV True PC9_epitope_Rep3 1006.5083595958998 1006.50726993586 59.899 2 0.18093242899032033 0.0004893964110929853 0.0014817841366367125 ['ENSG00000157778|ENST00000288607|PSMG3'] 26695 20228 FIVEEIQRI True PC9_epitope_Rep1 1145.6444591458899 1145.6433699358602 82.636 2 0.18092686256035218 0.0004893964110929853 0.0014819743202471077 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 77250 17726 NRYEDALVL True PC9_epitope_Rep3 1091.56112344475 1091.56002993586 73.379 2 0.1809143521890717 0.0004893964110929853 0.0014824018410142272 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 22401 4748 ETEKDFSRY True H1975_Epitope_Rep2 1173.5302172392899 1173.52858490379 23.353 3 0.18091095691332446 0.0004893964110929853 0.0014825178901347001 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 73234 14295 MSDSYLPSYY True H1975_Epitope_Rep3 1224.5008912569601 1224.49978993586 60.329 2 0.1809097037591597 0.0004893964110929853 0.0014825607247253947 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 6748 5011 AQDEERQASL True PC9_epitope_Rep5 1145.53127986845 1145.53018993586 24.307 2 0.18090826308471533 0.0004893964110929853 0.0014826099705580438 ['ENSG00000184575|ENST00000332707|XPOT'] 134814 21698 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep5 1230.58422733854 1230.5831299358601 88.509 2 0.18090656032113683 0.0004893964110929853 0.0014826681773619198 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 109731 4242 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 21.428 2 0.18090468740735607 0.0004893964110929853 0.001482732203177936 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 48137 19517 IYPEVVHMF True PC9_epitope_Rep4 1133.5579526406098 1133.55684993586 83.191 2 0.18090378911724878 0.0004893964110929853 0.001482762912332126 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 49152 3305 KELEKTYSA True NCI_RA007_Epitope_Rep4 1067.54989005471 1067.5487899358602 18.438 2 0.18090210139547339 0.0004893964110929853 0.001482820610904018 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 89428 13188 QYDPYTDSRF True PC9_epitope_Rep4 1290.55168095986 1290.5505899358602 58.625 2 0.1808992513442394 0.0004893964110929853 0.0014829180514345582 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 116717 6752 TVDGPSGKLWR True NCI_RA007_Epitope_Rep5 1214.64077074778 1214.6391149037902 32.647 3 0.18089784944943446 0.0004893964110929853 0.0014829659832333772 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 37901 7031 GYSFTTTAER True H1975_Epitope_Rep3 1131.51965255559 1131.5185499358602 32.008 2 0.18088922822014708 0.0004893964110929853 0.001483260783434885 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 129305 21475 VQWENSFVSV True PC9_epitope_Rep1 1193.57168812845 1193.5705899358602 87.445 2 0.18088722379661892 0.0004893964110929853 0.0014833293324741422 ['ENSG00000174231|ENST00000304992|PRPF8'] 28431 13052 FSDDSDLQL True NCI_RA007_Epitope_Rep5 1038.4505699362599 1038.4494699358602 56.881 2 0.18088484545467107 0.0004893964110929853 0.001483410673222029 ['ENSG00000025800|ENST00000373625|KPNA6'] 90511 5622 RELPFTKSA True H1975_Epitope_Rep2 1047.57129420563 1047.57018993586 26.624 2 0.1808611929136548 0.0004893964110929853 0.0014842198478406377 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 37513 18869 GVVDPRAISVL True PC9_epitope_Rep4 1124.65535818276 1124.6542699358602 80.665 2 0.1808542914865341 0.0004893964110929853 0.001484456035180159 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 106175 12562 STDPLDAGVDY True H1975_Epitope_Rep3 1151.4982484046698 1151.49767496793 53.519 1 0.18085132884844116 0.0004893964110929853 0.0014845574370096256 ['ENSG00000139645|ENST00000267116|ANKRD52'] 116933 19853 TVFTDHMLTV True PC9_epitope_Rep5 1162.5692456002998 1162.5681499358602 81.414 2 0.18084640736366772 0.0004893964110929853 0.001484725899370332 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 77496 5634 NTDEM[Oxidation]VELR True NCI_RA007_Epitope_Rep2 1121.5022886197298 1121.50118993586 26.528 2 0.1808461848378007 0.0004893964110929853 0.0014847335168804829 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000483135.1_1_9:86591819-86593167:-|nuORF'] 34690 7082 GQDGSVVQFK True NCI_RA007_Epitope_Rep1 1063.52982331647 1063.5287299358602 31.541 2 0.18083120980793776 0.0004893964110929853 0.0014852462324114939 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF', 'ENST00000511179.1_1_17:48313271-48313352:+|nuORF'] 55054 18569 KYTEITATYF True PC9_epitope_Rep1 1235.6074049308297 1235.60630993586 76.214 2 0.180828014502606 0.0004893964110929853 0.001485355656335361 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 133962 17669 VYINEVRVI True PC9_epitope_Rep5 1103.6338944621898 1103.63278993586 72.977 2 0.18082471898651323 0.0004893964110929853 0.0014854685204596352 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 30548 4797 GAGTDDHTLIR True NCI_RA007_Epitope_Rep2 1154.5679997303398 1154.56636490379 23.29 3 0.18082177199516541 0.0004893964110929853 0.0014855694556610314 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 40284 13954 HQLSQLQAL True PC9_epitope_Rep3 1036.5665431783598 1036.5654499358602 58.751 2 0.1808203880233733 0.0004893964110929853 0.0014856168594173053 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 62927 20001 LLPDLIQKV True PC9_epitope_Rep5 1037.6484818971699 1037.64738993586 81.987 2 0.1808198273468581 0.0004893964110929853 0.0014856360641222054 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 10090 18850 AYTPFHAVL True PC9_epitope_Rep1 1017.5283667644899 1017.52726993586 77.29 2 0.18081867532097323 0.0004893964110929853 0.0014856755249418154 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 110003 5123 TEINSQRIAA True H1975_Epitope_Rep2 1101.5778361380499 1101.5767299358602 24.781 2 0.18080956514868463 0.0004893964110929853 0.0014859876164359399 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 76442 15718 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.52857496793 65.282 1 0.1808093208767651 0.0004893964110929853 0.0014859959854791511 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 29024 6788 FTEPNRHFY True H1975_Epitope_Rep2 1209.5567067706497 1209.5550749037902 31.026 3 0.18080057755016815 0.0004893964110929853 0.0014862955732286903 ['ENSG00000165355|ENST00000298097|FBXO33'] 133727 19849 VYDPSLKTLL True PC9_epitope_Rep3 1147.64887581999 1147.6477699358602 81.584 2 0.18079918438710393 0.0004893964110929853 0.0014863433151779764 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 47073 4621 ITSPVVTQK True NCI_RA007_Epitope_Rep5 971.56514619603 971.56404993586 24.45 2 0.18079737958774775 0.0004893964110929853 0.0014864051656707736 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR', 'ENST00000504466.1_1_5:74645886-74647190:+|nuORF'] 41484 14113 HYLPDLHHL True PC9_epitope_Rep5 1143.5825275956702 1143.5808749037901 59.297 3 0.18079672466255814 0.0004893964110929853 0.0014864276106015286 ['ENSG00000130702|ENST00000252999|LAMA5'] 28370 13771 FRVKYETEL True PC9_epitope_Rep5 1183.62372370131 1183.62262993586 57.991 2 0.18078979263530995 0.0004893964110929853 0.0014866651988164497 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 114980 16638 TQYPFDFRGA True PC9_epitope_Rep6 1200.5563724174797 1200.55526993586 76.465 2 0.1807891412037759 0.0004893964110929853 0.0014866875279283822 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 104670 14666 SQTLVSQGL True PC9_epitope_Rep5 931.4974605590301 931.49691496793 61.415 1 0.18078361025070294 0.0004893964110929853 0.001486877125887897 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 42870 4340 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 21.81 2 0.18078152570558073 0.0004893964110929853 0.0014869485892075147 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 54799 16270 KYPDIISRI True PC9_epitope_Rep1 1103.63389446219 1103.63278993586 67.401 2 0.18076755783484738 0.0004893964110929853 0.0014874275308693731 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 24315 15682 EYVEKFYRI True PC9_epitope_Rep3 1245.6393737654498 1245.63826993586 65.463 2 0.1807572810159436 0.0004893964110929853 0.0014877800094476887 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 71684 3987 M[Oxidation]EDANVRVA True H1975_Epitope_Rep2 1019.4705945686298 1019.46948993586 20.404 2 0.18072719212252153 0.0004893964110929853 0.0014888124920203185 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 132767 17604 VVITEKGISDL True PC9_epitope_Rep1 1172.66525416012 1172.66414993586 72.507 2 0.1807236616594502 0.0004893964110929853 0.0014889336848201752 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 5017 20980 ALIEKLVEL True PC9_epitope_Rep1 1026.63249747986 1026.6314099358601 85.525 2 0.1807185131683699 0.0004893964110929853 0.0014891104385738754 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 90388 10289 REIDDYIVQA True H1975_Epitope_Rep1 1220.6037165327198 1220.60260993586 44.521 2 0.18071608222518032 0.0004893964110929853 0.0014891939030189157 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 30592 18545 GAIPRLVQL True PC9_epitope_Rep2 965.6022004110898 965.60110993586 76.685 2 0.1807144687521268 0.0004893964110929853 0.0014892493028836804 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 64811 4560 LQDAEIAR True NCI_RA007_Epitope_Rep5 914.4821448480599 914.48104993586 24.198 2 0.1807015548361614 0.0004893964110929853 0.0014896927867419712 ['ENSG00000197956|ENST00000368719|S100A6'] 107562 8772 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6336349037902 41.593 3 0.1807002904784916 0.0004893964110929853 0.0014897362138518464 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 131112 12123 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.5222499358601 51.798 2 0.18069770417395947 0.0004893964110929853 0.0014898250500484482 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 97642 10975 SEFTKIITP True NCI_RA007_Epitope_Rep4 1034.5648118428599 1034.56370993586 49.084 2 0.1806913971352004 0.0004893964110929853 0.0014900417108803415 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 65067 18145 LQLDPAQIYRV True PC9_epitope_Rep6 1314.7295857521801 1314.7284899358601 82.431 2 0.1806909397269712 0.0004893964110929853 0.001490057425099702 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 59576 8198 LFVGGIKED True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 39.378 2 0.1806900594030877 0.0004893964110929853 0.0014900876690163453 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 54759 11588 KYNANFVTF True NCI_RA007_Epitope_Rep4 1102.54474510462 1102.54364993586 51.521 2 0.18068948830215617 0.0004893964110929853 0.0014901072897705368 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 21532 12395 ERMPEQIRL True PC9_epitope_Rep5 1170.61792712822 1170.61682993586 52.674 2 0.18068745781468343 0.0004893964110929853 0.0014901770513320106 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 126811 13366 VLPSITTEILK True H1975_Epitope_Rep1 1212.73293979712 1212.73184993586 56.523 2 0.18067944741542333 0.0004893964110929853 0.0014904522969468978 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 142438 19630 YYFEGIKQTF True PC9_epitope_Rep2 1294.6233893481397 1294.6228749679299 80.891 1 0.1806717699761379 0.0004893964110929853 0.0014907161495169706 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 90701 5150 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.6352499358602 24.886 2 0.18067063074017445 0.0004893964110929853 0.0014907553059253847 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 112503 15497 TLDPQTGLFY True H1975_Epitope_Rep3 1153.5655401188499 1153.5649749679299 65.025 1 0.1806659172143475 0.0004893964110929853 0.0014909173243529627 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 327 19481 AAIEIFEKV True PC9_epitope_Rep3 1018.5698972232999 1018.56880993586 80.163 2 0.18065717178512958 0.0004893964110929853 0.0014912179784757648 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 138863 13730 YKDGTELEL True PC9_epitope_Rep5 1066.51825557326 1066.51714993586 57.835 2 0.180655464049586 0.0004893964110929853 0.0014912766948305472 ['ENSG00000143815|ENST00000272163|LBR'] 136427 20332 WVDPNSPVL True PC9_epitope_Rep1 1025.51819600361 1025.5170899358602 83.037 2 0.1806467859498711 0.0004893964110929853 0.0014915751060874496 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 36019 9674 GTYDILVTK True NCI_RA007_Epitope_Rep5 1008.54916177872 1008.54806993586 43.847 2 0.18064542571216796 0.0004893964110929853 0.001491621885603796 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A'] 135063 5006 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 24.339 2 0.18064522355712037 0.0004893964110929853 0.0014916288379813025 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 107315 13473 SVLDYFSER True NCI_RA007_Epitope_Rep4 1114.5294889632999 1114.52838993586 59.029 2 0.18064186229648083 0.0004893964110929853 0.001491744440905728 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6', 'ENST00000556044.5_1_14:71060086-71067354:-|nuORF', 'ENST00000556423.1_1_14:71063310-71067354:-|nuORF', 'ENST00000553611.5_1_14:71060082-71067354:-|nuORF', 'ENST00000554870.5_1_14:71059985-71067354:-|nuORF', 'ENST00000556495.5_1_14:71059591-71067354:-|nuORF', 'nc|ENSG00000133997|O75586-3|MED6'] 21282 14584 ERDVSLTSL True PC9_epitope_Rep3 1018.5294889633 1018.52838993586 61.225 2 0.18063376095586448 0.0004893964110929853 0.001492023105004973 ['ENSG00000179409|ENST00000319004|GEMIN4'] 89557 20088 QYMELFNKI True PC9_epitope_Rep2 1184.5899810448798 1184.5888899358602 82.676 2 0.18063302084398913 0.0004893964110929853 0.001492048565441832 ['ENSG00000124641|ENST00000265350|MED20'] 78402 21600 NYLLYVSNF True PC9_epitope_Rep4 1131.5600608155898 1131.5589699358602 91.269 2 0.18063201632945552 0.0004893964110929853 0.0014920831222366548 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 54795 9960 KYPDAVATW True NCI_RA007_Epitope_Rep3 1049.51819600361 1049.5170899358602 46.262 2 0.18062874947923513 0.0004893964110929853 0.001492195512290394 ['CON__P31096', 'ENST00000505146.1_1_4:88898047-88901296:+|nuORF', 'ENST00000508002.5_1_4:88896921-88901631:+|nuORF', 'nc|ENSG00000118785|P10451-4|SPP1', 'nc|ENSG00000118785|P10451-5|SPP1', 'ENSG00000118785|ENST00000395080|SPP1', 'ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 96244 13842 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.60254993586 58.526 2 0.1806266146498403 0.0004893964110929853 0.0014922689618041668 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 90711 4617 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 22.882 2 0.18062290428296884 0.0004893964110929853 0.0014923966268263744 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 111912 13142 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 62.191 2 0.18062008940844118 0.0004893964110929853 0.0014924934873570069 ['ENSG00000213719|ENST00000375784|CLIC1'] 114671 13616 TQFELTGHSV True PC9_epitope_Rep1 1117.54038800017 1117.53928993586 57.229 2 0.18061743968667235 0.0004893964110929853 0.0014925846706952321 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 40168 20313 HQDSTWIVL True PC9_epitope_Rep3 1097.55055876105 1097.54946993586 83.382 2 0.18061072651515409 0.0004893964110929853 0.001492815712156755 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 12232 11307 DIISDTSGDFR True H1975_Epitope_Rep3 1224.5622456435601 1224.5611499358602 48.598 2 0.18060882696137268 0.0004893964110929853 0.0014928810939723004 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 12704 5750 DLEAHIDSANK True NCI_RA007_Epitope_Rep1 1211.57823006087 1211.57659490379 26.422 3 0.1806066997574666 0.0004893964110929853 0.0014929543148115576 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 129213 7972 VQTEVNREL True PC9_epitope_Rep3 1086.56693710118 1086.5658499358601 35.642 2 0.18060428757177957 0.0004893964110929853 0.00149303734940948 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 65345 16853 LRDGQILEL True PC9_epitope_Rep4 1055.59750895347 1055.59640993586 72.806 2 0.18060290237393165 0.0004893964110929853 0.0014930850341262107 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 9946 23400 AYMQEPLFVEF True PC9_epitope_Rep1 1372.6373251601196 1372.63622993586 94.792 2 0.18059595851223617 0.0004893964110929853 0.0014933240959570221 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 110935 17504 THAAEDIVYTL True PC9_epitope_Rep2 1231.6084675599898 1231.60736993586 72.586 2 0.18059332600275027 0.0004893964110929853 0.0014934147374728113 ['ENSG00000075420|ENST00000415807|FNDC3B'] 12653 9119 DLDHSIGTQY True H1975_Epitope_Rep3 1147.51456717515 1147.51346993586 40.065 2 0.1805896077786388 0.0004893964110929853 0.0014935427712723132 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 41124 15567 HTVGELIEV True PC9_epitope_Rep4 995.5287606873098 995.52766993586 67.799 2 0.18058701273329575 0.0004893964110929853 0.0014936321359080764 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 69674 12889 LVDTFLEDVK True H1975_Epitope_Rep3 1177.6230549949698 1177.6219499358601 54.803 2 0.18058238697090545 0.0004893964110929853 0.0014937914448966123 ['CON__P34955'] 40842 8522 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48724993586 37.766 2 0.18057791949933397 0.0004893964110929853 0.0014939453185870268 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 96314 14292 RYSGNQVLF True PC9_epitope_Rep1 1082.55089311422 1082.5497899358602 59.799 2 0.18057175474997045 0.0004893964110929853 0.0014941576779086043 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 32029 12780 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 54.221 2 0.18057095464512662 0.0004893964110929853 0.001494185241622955 ['ENSG00000051523|ENST00000261623|CYBA'] 62003 14563 LLDPSVFHV True H1975_Epitope_Rep2 1025.5545815123298 1025.5534899358602 61.173 2 0.18057075900906927 0.0004893964110929853 0.0014941919813877022 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 128047 9856 VPKNSDPWAA True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 42.871 2 0.18056862158186926 0.0004893964110929853 0.0014942656188596578 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 72893 19159 MPTLPPPSV True PC9_epitope_Rep1 937.49428975489 937.49318993586 78.489 2 0.18055960014772723 0.0004893964110929853 0.001494576460431547 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 141541 14038 YTMKEVLFY True H1975_Epitope_Rep2 1192.58383303528 1192.58272993586 59.149 2 0.18055135529913774 0.0004893964110929853 0.0014948606007136953 ['nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2'] 49964 5295 KIMKDILEKK True NCI_RA007_Epitope_Rep4 1244.7526296958797 1244.7509849037901 26.919 3 0.18054342436385537 0.0004893964110929853 0.0014951339737447958 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 127283 12299 VMAPRTLLL True H1975_Epitope_Rep1 1012.6103225666399 1012.60922993586 52.335 2 0.1805388879041997 0.0004893964110929853 0.0014952903644191733 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENST00000463348.5_1_6:30227401-30227711:+|nuORF'] 141038 12269 YSLEPVAVELK True H1975_Epitope_Rep3 1246.68090422426 1246.67980993586 52.37 2 0.18053529932946322 0.0004893964110929853 0.0014954140891594385 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 87718 8558 QRAITGASL True PC9_epitope_Rep3 915.5137793295099 915.51268993586 37.871 2 0.18053099709787346 0.0004893964110929853 0.001495562432454437 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 88665 11684 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep1 1318.5751192068199 1318.5740299358602 49.932 2 0.18053011471027675 0.0004893964110929853 0.001495592859482686 ['ENSG00000167325|ENST00000300738|RRM1'] 116608 20918 TVADVVLWSV True PC9_epitope_Rep6 1087.59136094387 1087.59026993586 93.236 2 0.18052824151683472 0.0004893964110929853 0.0014956574541392961 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 21439 14023 ERISLQQEL True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 59.218 2 0.18052634885437008 0.0004893964110929853 0.0014957227229988512 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 54595 17852 KYITQGQLLQF True PC9_epitope_Rep6 1337.73433677945 1337.7332299358602 81.296 2 0.18051446477584981 0.0004893964110929853 0.0014961326131417083 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 75396 20730 NIVDKFVIV True PC9_epitope_Rep3 1045.61718176889 1045.6160899358601 85.006 2 0.18050686374179484 0.0004893964110929853 0.0014963948371057958 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 103397 6522 SPPPPPPPP True NCI_RA007_Epitope_Rep1 881.4647038787699 881.46360993586 29.384 2 0.18050640050684105 0.0004893964110929853 0.0014964108194865419 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 119333 13476 VANVSLLALYK True NCI_RA007_Epitope_Rep5 1189.7070594024497 1189.7059699358601 58.52 2 0.1804948448331394 0.0004893964110929853 0.001496809564908526 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 133954 21569 VYILQPEVI True PC9_epitope_Rep2 1072.6168474157198 1072.61574993586 88.437 2 0.18048933979366008 0.0004893964110929853 0.0014969995617820958 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 17831 7766 EHTNAIGTL True PC9_epitope_Rep4 954.4770594676199 954.47596993586 37.267 2 0.1804843195758445 0.0004893964110929853 0.0014971728469425588 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 134918 13364 VYVVGTAHF True PC9_epitope_Rep6 991.5127167003499 991.51160993586 63.068 2 0.1804826070325232 0.0004893964110929853 0.0014972319641826303 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 17535 18504 EHGIVVFSL True PC9_epitope_Rep6 999.5389314481899 999.53782993586 83.817 2 0.18048212324953672 0.0004893964110929853 0.001497248664864074 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 68380 7930 LTEQYNEQY True H1975_Epitope_Rep1 1186.51423282198 1186.51367496793 35.454 1 0.18046687443949325 0.0004893964110929853 0.0014977751649829156 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 133862 19596 VYGPLPQSF True PC9_epitope_Rep4 1006.5123823471798 1006.51128993586 83.5 2 0.18046299066541924 0.0004893964110929853 0.0014979092908201186 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 134737 9058 VYTSGVYHI True NCI_RA007_Epitope_Rep5 1037.51819600361 1037.5170899358602 41.498 2 0.1804544794131775 0.0004893964110929853 0.001498203268341547 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 98023 8379 SEQFTAM[Oxidation]FR True H1975_Epitope_Rep1 1131.5018946969099 1131.5007899358602 37.158 2 0.18045428948467454 0.0004893964110929853 0.0014982098291060997 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 1748 7262 AEGQRLFSA True H1975_Epitope_Rep3 977.4930438849299 977.49194993586 32.906 2 0.18045124688341663 0.0004893964110929853 0.0014983149346351982 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'ENST00000569800.5_1_16:69167425-69171817:+|nuORF'] 54835 16422 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 72.344 2 0.18044805389237042 0.0004893964110929853 0.0014984252432678668 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 130112 4152 VSDPSSPQYGK True NCI_RA007_Epitope_Rep2 1163.5458673034298 1163.5447699358601 20.789 2 0.18044137515650432 0.0004893964110929853 0.0014986560006409319 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1'] 133932 7382 VYIKHPVSL True NCI_RA007_Epitope_Rep4 1054.61751612206 1054.61640993586 35.037 2 0.18043533540277665 0.0004893964110929853 0.0014988647111634755 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 63802 12653 LNGTDPEDVIR True PC9_epitope_Rep1 1227.60953018915 1227.6084299358602 53.539 2 0.18043374906176193 0.0004893964110929853 0.0014989195338003531 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 53861 19636 KTIEDTLMTV True PC9_epitope_Rep1 1149.59512599497 1149.5940299358601 80.354 2 0.1804303739344786 0.0004893964110929853 0.0014990361820993912 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 134332 5788 VYPARTQTL True NCI_RA007_Epitope_Rep5 1047.57129420563 1047.57018993586 28.95 2 0.18042562507044826 0.0004893964110929853 0.0014992003237287725 ['ENSG00000198502|ENST00000374975|HLA-DRB5'] 71912 14893 M[Oxidation]EQISQFLQAA True H1975_Epitope_Rep2 1280.60708804144 1280.6059899358602 62.44 2 0.18042168981506487 0.0004893964110929853 0.0014993363571080976 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 137798 15144 YEQLMQLYSA True H1975_Epitope_Rep2 1244.57472490356 1244.57362993586 63.406 2 0.18041632359164905 0.0004893964110929853 0.0014995218759275776 ['ENSG00000115268|ENST00000592588|RPS15'] 139135 15290 YLDQMEDLY True H1975_Epitope_Rep2 1188.50089125696 1188.49978993586 63.971 2 0.1804161958689617 0.0004893964110929853 0.0014995262917828142 ['ENSG00000198356|ENST00000357332|GET3'] 118369 13170 TYNPAFSRL True PC9_epitope_Rep4 1067.53999407735 1067.5388899358602 58.556 2 0.1804085920154508 0.0004893964110929853 0.0014997892091676705 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 41616 17037 IADSNYNWFY True H1975_Epitope_Rep1 1291.55095268387 1291.54984993586 70.957 2 0.18040523788650623 0.0004893964110929853 0.0014999051990965478 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant', 'DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE'] 31778 6946 GEIASFDKA True NCI_RA007_Epitope_Rep5 936.4552613938799 936.45416993586 33.403 2 0.18039895390005595 0.0004893964110929853 0.001500122531315036 ['ENSG00000034510|ENST00000233143|TMSB10'] 93468 17756 RQIDQFLVV True PC9_epitope_Rep6 1116.62914343492 1116.6280499358602 80.932 2 0.18037595500433173 0.0004893964110929853 0.001500918219201855 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 78442 17585 NYLSTMKNF True PC9_epitope_Rep1 1116.52738078832 1116.5262899358602 72.432 2 0.18036476928764444 0.0004893964110929853 0.0015013053618758833 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 15216 11350 EADVAQLEY True H1975_Epitope_Rep3 1036.47130538084 1036.47020993586 48.769 2 0.18036463194318494 0.0004893964110929853 0.0015013101160509564 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 141862 15496 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.54357496793 64.88 1 0.18036272965583303 0.0004893964110929853 0.0015013759652318637 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 54064 15046 KVIEIVTDC True PC9_epitope_Rep5 1018.5368828428599 1018.53578993586 62.879 2 0.18036260361276227 0.0004893964110929853 0.001501380328414639 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 47844 10510 IYHNPTANSF True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 45.316 2 0.18035555219980182 0.0004893964110929853 0.0015016244446047836 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 138269 10185 YHADIYDKV True PC9_epitope_Rep3 1122.53457434374 1122.5329349037902 44.129 3 0.1803479221296069 0.0004893964110929853 0.0015018886383979138 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 116721 11197 TVDGVVFHY True H1975_Epitope_Rep1 1035.50254593947 1035.5014499358601 48.038 2 0.18032857862538887 0.0004893964110929853 0.0015025586225545008 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant', 'nc|ENSG00000038427|P13611-4|VCAN'] 11680 10936 DGTGVVEFVR True NCI_RA007_Epitope_Rep1 1077.5454733806098 1077.54436993586 46.531 2 0.1803275821089292 0.0004893964110929853 0.0015025931461388642 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 136909 16620 YAFPKAVSV True PC9_epitope_Rep1 980.5331177917599 980.53202993586 68.755 2 0.1803218794370232 0.0004893964110929853 0.0015027907263260314 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 45031 19487 IPFWRNTAV True PC9_epitope_Rep1 1102.59236400338 1102.59126993586 79.775 2 0.18032097382573736 0.0004893964110929853 0.0015028221053896593 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3'] 22231 8721 ESYSVYVYK True H1975_Epitope_Rep1 1136.5389910178399 1136.53847496793 38.473 1 0.18031798358675055 0.0004893964110929853 0.0015029257206195686 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 17350 20829 EHDAFIFAL True PC9_epitope_Rep4 1061.51819600361 1061.5170899358602 88.269 2 0.18029388697836576 0.0004893964110929853 0.0015037609571659596 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 14765 6847 DVNQQEFVR True H1975_Epitope_Rep3 1133.5465360097699 1133.54542993586 31.294 2 0.1802931298214154 0.0004893964110929853 0.0015037872092716544 ['ENSG00000105372|ENST00000598742|RPS19'] 53668 15686 KSDPFLVFY True H1975_Epitope_Rep2 1114.5698972233 1114.5688099358601 65.503 2 0.18029082349838474 0.0004893964110929853 0.0015038671768110928 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant', 'CPNE8|p.K277Efs*5|1|0.39|ENSG00000139117|chr12:38724870-38724871|-/T|frameshift_variant', 'ENST00000551855.1_1_12:39120300-39161507:-|nuORF', 'ENSG00000124772|ENST00000244751|CPNE5', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 400 5452 AALEDKNSL True NCI_RA007_Epitope_Rep4 959.49237517859 959.49126993586 27.55 2 0.1802886595993533 0.0004893964110929853 0.0015039422099323212 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1'] 129292 18119 VQVPVPVTV True PC9_epitope_Rep6 936.5644179200399 936.56386496793 82.33 1 0.18028728900092397 0.0004893964110929853 0.0015039897373238086 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 9088 18584 AVIGDVIRV True PC9_epitope_Rep3 940.57056592964 940.56946993586 76.709 2 0.1802830468506892 0.0004893964110929853 0.001504136849272351 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 53371 14411 KQTALVELLK True PC9_epitope_Rep5 1141.7070594024499 1141.7059699358601 60.431 2 0.18028249279951028 0.0004893964110929853 0.0015041560640712687 ['CON__P02769'] 142920 19229 YYWQTSAKW True PC9_epitope_Rep5 1231.5662088251897 1231.5651099358602 79.004 2 0.18027178155381585 0.0004893964110929853 0.0015045275842867634 ['nc|ENSG00000142687|Q8IZA0-2|KIAA0319L', 'ENSG00000142687|ENST00000325722|KIAA0319L', 'KIAA0319L|p.G18V|1|0.16|ENSG00000142687|chr1:35554439-35554439|C/A|missense_variant', 'KIAA0319L|p.C37Lfs*15|1|0.25|ENSG00000142687|chr1:35554382-35554383|-/A|frameshift_variant', 'ENST00000476329.1_1_1:35998986-36020116:-|nuORF'] 137247 15017 YCDPVVLTY True H1975_Epitope_Rep2 1071.4946836777099 1071.49417496793 62.914 1 0.18027147995588327 0.0004893964110929853 0.0015045380465602489 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 42869 4230 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 21.389 2 0.1802605796172536 0.0004893964110929853 0.001504916222494415 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 65904 8042 LSDPQVHTV True PC9_epitope_Rep1 994.5083595959 994.50726993586 35.755 2 0.18024248080397684 0.0004893964110929853 0.0015055443523843237 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 1578 9258 AEEVWARVA True H1975_Epitope_Rep2 1029.5243440132097 1029.5232499358601 40.567 2 0.1802420669542104 0.0004893964110929853 0.001505558718353541 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 20175 11898 ENFVAFVDK True NCI_RA007_Epitope_Rep1 1067.5287606873098 1067.52766993586 50.264 2 0.18024077225915147 0.0004893964110929853 0.0015056036619971167 ['CON__P02769'] 9830 15951 AYLEAIHNF True PC9_epitope_Rep6 1076.52909504048 1076.5279899358602 73.651 2 0.18023750493240906 0.0004893964110929853 0.0015057170889428127 ['ENSG00000042753|ENST00000263270|AP2S1'] 75157 6338 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59691490379 31.454 3 0.18023476924771745 0.0004893964110929853 0.0015058120662433234 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 14090 9251 DRTGTGTLSV True PC9_epitope_Rep5 1005.50908787189 1005.50798993586 40.532 2 0.18022730047365937 0.0004893964110929853 0.0015060713971563932 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 21466 16206 ERLGQFM[Oxidation]TL True PC9_epitope_Rep1 1109.55393026977 1109.55282993586 67.153 2 0.18021969887201494 0.0004893964110929853 0.0015063353860571829 ['ENSG00000113739|ENST00000265087|STC2'] 133736 11162 VYDTNPAKF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 47.921 2 0.18021932632098875 0.0004893964110929853 0.0015063483252243121 ['ENSG00000139433|ENST00000318348|GLTP'] 24441 9731 FADLSEAANR True PC9_epitope_Rep2 1092.5199869087598 1092.5188899358602 42.772 2 0.18021753273709995 0.0004893964110929853 0.0015064106202139548 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 100282 12564 SIYYITGESK True PC9_epitope_Rep1 1159.57610480255 1159.5750099358602 53.196 2 0.1802155103500802 0.0004893964110929853 0.0015064808651196748 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 142412 16367 YYEYNHDLF True PC9_epitope_Rep6 1262.5244035828598 1262.5233099358602 75.34 2 0.18021151388982756 0.0004893964110929853 0.0015066196864664471 ['ENSG00000151748|ENST00000324679|SAV1'] 5385 15507 ALSKEGIVAL True PC9_epitope_Rep3 999.5964463243098 999.59534993586 64.799 2 0.1802057184768841 0.0004893964110929853 0.001506821019138751 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 53394 17296 KQVEEIFNL True PC9_epitope_Rep6 1118.5971746003 1118.5960699358602 79.134 2 0.180204913125407 0.0004893964110929853 0.001506848999185787 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 139144 12767 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 54.212 2 0.18020343645501335 0.0004893964110929853 0.0015069003039853133 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 55219 10465 LADDSVRSL True PC9_epitope_Rep1 974.50327421546 974.50216993586 45.143 2 0.1801934846732149 0.0004893964110929853 0.0015072461100443509 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 113574 21441 TLVDEVFRI True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 87.946 2 0.1801852426203465 0.0004893964110929853 0.0015075325663648476 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 29334 19968 FVDEYDPTI True PC9_epitope_Rep3 1097.49170647225 1097.4906099358602 82.052 2 0.18018014602382432 0.0004893964110929853 0.0015077097282010384 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 31927 5617 GEMMVEQRAA True NCI_RA007_Epitope_Rep4 1120.50051441748 1120.49940993586 28.207 2 0.18017910735491882 0.0004893964110929853 0.0015077458357346282 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'ENST00000569319.5_1_16:70399881-70405886:+|nuORF', 'ENST00000562140.2_1_16:70398455-70404584:+|nuORF'] 107022 20946 SVFKDFYEL True PC9_epitope_Rep3 1146.55972646242 1146.5586299358602 85.847 2 0.18017709838434123 0.0004893964110929853 0.001507815676591139 ['ENSG00000100994|ENST00000216962|PYGB'] 97751 11263 SEIPKLPAV True NCI_RA007_Epitope_Rep5 952.5593325395998 952.55822993586 49.967 2 0.1801754514360087 0.0004893964110929853 0.001507872934343169 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 78310 19779 NYIPRFWTF True PC9_epitope_Rep6 1242.6185787512197 1242.61748993586 88.737 2 0.18017529410480557 0.0004893964110929853 0.0015078784042286322 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 142712 20424 YYQEYPMSI True PC9_epitope_Rep3 1192.5110620178398 1192.50996993586 83.814 2 0.18017447448598076 0.0004893964110929853 0.0015079068999853088 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 8159 14739 ATEQAPLWAY True H1975_Epitope_Rep2 1148.5502244078798 1148.54912993586 61.854 2 0.180174011630505 0.0004893964110929853 0.0015079229923589583 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000480324.5_1_1:111690336-111702181:+|nuORF'] 88972 9257 QVIGVVLQK True NCI_RA007_Epitope_Rep2 982.6175161220598 982.61640993586 40.616 2 0.18017058558492272 0.0004893964110929853 0.0015080421130887864 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 6650 19163 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 78.747 2 0.18016840167320927 0.0004893964110929853 0.0015081180507864672 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 18847 10901 ELDPQSSNLY True H1975_Epitope_Rep3 1164.52988288612 1164.52878993586 47.016 2 0.18014823703162702 0.0004893964110929853 0.0015088193848922429 ['nc|ENSG00000153029|Q95460-2|MR1', 'ENSG00000153029|ENST00000367580|MR1'] 137191 13437 YAYDGKDYLA True PC9_epitope_Rep5 1177.5291546101298 1177.52804993586 56.702 2 0.18014593593483288 0.0004893964110929853 0.0015088994387054155 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 115363 19746 TRIWQDVQL True PC9_epitope_Rep5 1157.6193070272097 1157.61820993586 80.998 2 0.18013828614851668 0.0004893964110929853 0.0015091656008909145 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 8191 7637 ATFDAISK True PC9_epitope_Rep2 851.43888305375 851.43778993586 34.745 2 0.18013231377586966 0.0004893964110929853 0.0015093734328234262 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF', 'ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 75769 21380 NLLQVLEKV True PC9_epitope_Rep2 1054.63864548946 1054.63754993586 87.708 2 0.1801282247538626 0.0004893964110929853 0.0015095157427824407 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 136867 9573 YADVGGKQF True PC9_epitope_Rep1 983.47124581119 983.47014993586 41.68 2 0.1801249557537988 0.0004893964110929853 0.001509629523241675 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 126447 20178 VLKVFLENV True PC9_epitope_Rep5 1059.63283183303 1059.6317299358602 82.663 2 0.1801154916669928 0.0004893964110929853 0.0015099589776612402 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 40754 16658 HRTEMDWVL True PC9_epitope_Rep2 1185.5600778989299 1185.55843490379 69.319 3 0.18010833960744077 0.0004893964110929853 0.0015102079958618283 ['ENSG00000169813|ENST00000682386|HNRNPF'] 31694 7085 GEFVTTVQQR True NCI_RA007_Epitope_Rep1 1163.59348620219 1163.5923899358602 31.552 2 0.18009388944584376 0.0004893964110929853 0.0015107112426711253 ['nc|ENSG00000014641|P40925-2|MDH1', 'ENSG00000014641|ENST00000233114|MDH1', 'nc|ENSG00000014641|P40925-3|MDH1'] 29509 22043 FVFPGELLL True PC9_epitope_Rep6 1033.5848190114498 1033.5837299358602 97.721 2 0.18009323101046848 0.0004893964110929853 0.0015107341775929535 ['ENSG00000105281|ENST00000542575|SLC1A5'] 53999 18757 KVFDPVPVGV True PC9_epitope_Rep3 1055.60153170475 1055.6004299358601 77.369 2 0.1800913129992005 0.0004893964110929853 0.0015108009886258564 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 137211 17195 YAYDGKDYLAL True PC9_epitope_Rep6 1290.6132185872598 1290.6121299358601 78.728 2 0.18008838277590075 0.0004893964110929853 0.0015109030642555536 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 104987 16054 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 66.565 2 0.18008706510565664 0.0004893964110929853 0.0015109489681356322 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 37906 7096 GYSFTTTAER True NCI_RA007_Epitope_Rep5 1131.51965255559 1131.5185499358602 33.975 2 0.18008583742784892 0.0004893964110929853 0.0015109917381927603 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 21511 6816 ERMAGNEAL True PC9_epitope_Rep3 989.4600295044899 989.4589299358599 31.235 2 0.18007947827138635 0.0004893964110929853 0.0015112132990267643 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 130094 13896 VSDMVEDLY True H1975_Epitope_Rep2 1069.4637774722498 1069.46327496793 58.596 1 0.18007925006945272 0.0004893964110929853 0.0015112212504677898 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 107090 12368 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 52.432 2 0.1800757747509846 0.0004893964110929853 0.0015113423492308783 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 53838 16128 KTFSEILNRV True PC9_epitope_Rep5 1205.67682190333 1205.6751749037899 67.026 3 0.18007402150688273 0.0004893964110929853 0.0015114034453622956 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 23904 5215 EYKTVHEEL True NCI_RA007_Epitope_Rep4 1146.5557037111398 1146.55460993586 26.594 2 0.18007287234672906 0.0004893964110929853 0.0015114434920353562 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 140286 7715 YRAQPSASL True PC9_epitope_Rep3 991.5086939490699 991.50758993586 34.672 2 0.18006715156806044 0.0004893964110929853 0.0015116428692336175 ['ENSG00000239306|ENST00000310137|RBM14'] 81385 15989 PLDQTPLFY True H1975_Epitope_Rep2 1092.54916177872 1092.5480699358602 66.7 2 0.18006692433157254 0.0004893964110929853 0.0015116507892895044 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000514312.1_1_5:10415712-10417549:+|nuORF', 'ENST00000505253.1_1_5:10413496-10422048:+|nuORF'] 21179 6837 ERDM[Oxidation]SNVSL True PC9_epitope_Rep1 1065.47607387189 1065.4749699358601 31.104 2 0.18006454401963573 0.0004893964110929853 0.0015117337547124984 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 31939 4849 GENPIYKSA True NCI_RA007_Epitope_Rep3 977.4818104948899 977.48070993586 26.06 2 0.1800600349189666 0.0004893964110929853 0.001511890931260288 ['ENSG00000150093|ENST00000302278|ITGB1'] 40424 16993 HQYDGLVEL True PC9_epitope_Rep2 1072.5189242795998 1072.5178299358602 70.612 2 0.1800586422970846 0.0004893964110929853 0.0015119394780629184 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 14958 8813 DYFEQYGK True H1975_Epitope_Rep1 1048.4501760134401 1048.44906993586 38.822 2 0.1800458133938434 0.0004893964110929853 0.0015123867671296292 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 91618 18684 RIPAYFVTV True PC9_epitope_Rep4 1064.60186605792 1064.6007699358602 79.949 2 0.18004173070960658 0.0004893964110929853 0.0015125291406984103 ['ENSG00000204394|ENST00000375663|VARS1', 'ENST00000461874.1_1_6:31749609-31749932:-|nuORF', 'ENST00000483275.1_1_6:31749724-31750195:-|nuORF'] 36664 13025 GVIGQDGLLFK True NCI_RA007_Epitope_Rep4 1145.6444591458899 1145.6433699358602 57.204 2 0.18003634800573382 0.0004893964110929853 0.0015127168697755997 ['ENSG00000107371|ENST00000327304|EXOSC3', 'ENST00000465860.5_1_9:37781981-37784738:-|nuORF'] 78268 20961 NYIEFTRIL True PC9_epitope_Rep5 1167.62880908175 1167.6277099358601 85.686 2 0.1800354056421012 0.0004893964110929853 0.0015127497383827725 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 48313 11124 IYQYIQSRF True NCI_RA007_Epitope_Rep4 1216.6240580544797 1216.62296993586 49.663 2 0.18003119266087564 0.0004893964110929853 0.0015128966912845451 ['nc|ENSG00000105204|Q9Y463-2|DYRK1B', 'nc|ENSG00000105204|Q9Y463-3|DYRK1B', 'ENSG00000105204|ENST00000323039|DYRK1B', 'nc|ENSG00000157540|Q13627-4|DYRK1A', 'nc|ENSG00000157540|Q13627-3|DYRK1A', 'nc|ENSG00000157540|Q13627-5|DYRK1A', 'DYRK1A|p.S645Ifs*30|1|0.1|ENSG00000157540|chr21:37512171-37512172|-/A|frameshift_variant', 'DYRK1A|p.S671Lfs*32|1|0.16|ENSG00000157540|chr21:37512248-37512248|C/-|frameshift_variant', 'ENSG00000157540|ENST00000647188|DYRK1A', 'nc|ENSG00000157540|Q13627|DYRK1A'] 140467 20119 YRIESYWTY True PC9_epitope_Rep3 1279.5873381925899 1279.58624993586 82.64 2 0.18003074690217383 0.0004893964110929853 0.0015129122406202617 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 77010 14298 NRHYYSITI True PC9_epitope_Rep3 1165.58800689893 1165.5869099358601 60.084 2 0.18002013360461439 0.0004893964110929853 0.001513282510021216 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 90252 7559 REEEVTGPVIA True H1975_Epitope_Rep2 1198.61936659686 1198.61826993586 34.029 2 0.18001163707312653 0.0004893964110929853 0.001513578996578798 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 53977 8690 KVADGFKVV True PC9_epitope_Rep2 961.5596668927699 961.55856993586 38.789 2 0.18001057808100948 0.0004893964110929853 0.001513615954198567 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 15100 20707 DYVEGLRVF True PC9_epitope_Rep5 1096.5553097883198 1096.5542099358602 84.707 2 0.1800056286207155 0.0004893964110929853 0.0015137886967176311 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 21900 16521 ESDLPDELLY True H1975_Epitope_Rep2 1192.54994962436 1192.54884993586 68.769 2 0.1799927157014512 0.0004893964110929853 0.001514239467166848 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 48409 20304 IYVHDLLTF True PC9_epitope_Rep4 1119.59644632431 1119.5953499358602 86.242 2 0.17998773446590988 0.0004893964110929853 0.0015144133904939168 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 54353 8650 KYEELQIT True NCI_RA007_Epitope_Rep1 1022.5284263341399 1022.5273299358599 37.647 2 0.179986791024244 0.0004893964110929853 0.0015144463336744666 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 90922 11924 REYQDLLNV True NCI_RA007_Epitope_Rep2 1148.5825871653199 1148.5814899358602 50.986 2 0.17997920196682404 0.0004893964110929853 0.0015147113551769924 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 39114 15003 HHYEGAVVIL True PC9_epitope_Rep1 1136.5978433066398 1136.59674993586 62.529 2 0.17997509870631617 0.0004893964110929853 0.0015148546666668447 ['ENSG00000163655|ENST00000496455|GMPS'] 68184 11106 LTDRLASLY True H1975_Epitope_Rep2 1050.57095985246 1050.5698699358602 47.754 2 0.17997466409948146 0.0004893964110929853 0.0015148698466480523 ['nc|ENSG00000151553|Q5W0V3-2|FHIP2A', 'ENSG00000151553|ENST00000369248|FHIP2A'] 95971 12067 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64474993586 51.729 2 0.17997443805159058 0.0004893964110929853 0.0015148777421265494 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 133677 21099 VYAPPVGGFSF True PC9_epitope_Rep4 1139.56514619603 1139.56404993586 89.32 2 0.1799692297399013 0.0004893964110929853 0.001515059671247456 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 96136 19929 RYPAIIYNI True PC9_epitope_Rep5 1121.62332977849 1121.62222993586 81.712 2 0.17996605344335584 0.0004893964110929853 0.0015151706317341994 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1'] 9289 9586 AVQEFGLARFK True NCI_RA007_Epitope_Rep5 1264.6928063206399 1264.69117490379 43.517 3 0.1799655065732446 0.0004893964110929853 0.001515189736871975 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 128407 7662 VPRPPDTVST True PC9_epitope_Rep2 1067.56112344475 1067.56002993586 34.842 2 0.17996401681523377 0.0004893964110929853 0.0015152417834200787 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 66878 17382 LSNIFVIGK True PC9_epitope_Rep4 989.5909670210499 989.58986993586 74.861 2 0.17995886764462682 0.0004893964110929853 0.0015154216898906829 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 106500 18981 STLHLVLRL True PC9_epitope_Rep5 1050.65496425994 1050.65386993586 78.036 2 0.17993966231783992 0.0004893964110929853 0.0015160928920841495 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 110115 4484 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 22.361 2 0.179936520336758 0.0004893964110929853 0.00151620272874477 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 65318 6544 LRDEHNYTL True PC9_epitope_Rep2 1159.56218607391 1159.56055490379 30.585 3 0.17993188818797215 0.0004893964110929853 0.001516364672889349 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 94722 5728 RSEKMTLSY True H1975_Epitope_Rep3 1113.54884450889 1113.54774993586 27.061 2 0.1799248304578615 0.0004893964110929853 0.0015166114508845805 ['nc|ENSG00000101935|Q9Y4X0-4|AMMECR1', 'nc|ENSG00000101935|Q9Y4X0-3|AMMECR1', 'ENSG00000101935|ENST00000262844|AMMECR1'] 52668 21590 KLVEFDFLGA True PC9_epitope_Rep5 1137.60701100801 1137.6059099358602 88.086 2 0.1799170440977758 0.0004893964110929853 0.0015168837525677931 ['ENSG00000013810|ENST00000313288|TACC3', 'TACC3|p.A598S|1|0.3|ENSG00000013810|chr4:1737284-1737284|G/T|missense_variant', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 54062 19027 KVIEINPYL True PC9_epitope_Rep5 1087.62774645259 1087.62664993586 78.215 2 0.1799162879951025 0.0004893964110929853 0.0015169101973176334 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 85803 4832 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 26.094 2 0.1799091563948559 0.0004893964110929853 0.0015171596483153696 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 118679 21103 TYTDRVFFL True PC9_epitope_Rep1 1160.5866099165999 1160.58550993586 86.0 2 0.17989139081337777 0.0004893964110929853 0.0015177812362348606 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 54917 11257 KYPSDLPYM True NCI_RA007_Epitope_Rep4 1112.5212327787199 1112.52012993586 50.193 2 0.17988435365815164 0.0005180580224985198 0.001518027525041904 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG'] 52610 20381 KLLPQLTYL True PC9_epitope_Rep2 1087.66413196131 1087.66302993586 83.819 2 0.17988263069824403 0.0005180580224985198 0.0015180878318934161 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 114701 14573 TQIDHYVGI True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 61.325 2 0.1798705613477486 0.0005180580224985198 0.0015185103492611342 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 136852 13354 YADPGVSFY True H1975_Epitope_Rep2 1017.44436235701 1017.44326993586 56.498 2 0.1798663780217316 0.0005180580224985198 0.0015186568243931748 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 2321 18679 AEPLEIILHLP True H1975_Epitope_Rep1 1243.71762408615 1243.71652993586 77.896 2 0.17986223797958528 0.0005180580224985198 0.0015188017979179472 ['ENSG00000100138|ENST00000401959|SNU13'] 20796 9671 EQIEAGTPGRL True PC9_epitope_Rep2 1169.6040508858898 1169.6029499358601 42.537 2 0.17985847930191698 0.0005180580224985198 0.0015189334290567516 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 113582 15567 TLVEAIKQV True PC9_epitope_Rep5 999.5964463243098 999.59534993586 64.888 2 0.17985208131705582 0.0005180580224985198 0.0015191575165962846 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 99437 19705 SIAGIFKEV True PC9_epitope_Rep5 962.54368247546 962.54258993586 80.842 2 0.17985110721023298 0.0005180580224985198 0.0015191916373065123 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 95626 16376 RYALQMEQL True PC9_epitope_Rep2 1150.5804789903398 1150.57938993586 68.235 2 0.17984969303308043 0.0005180580224985198 0.0015192411740294904 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 101335 17593 SLIRNLEQL True PC9_epitope_Rep6 1084.62405805448 1084.62296993586 80.313 2 0.17984778009787253 0.0005180580224985198 0.0015193081841510235 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 141422 15378 YTESFPDLY True H1975_Epitope_Rep2 1133.49170647225 1133.4906099358602 64.311 2 0.17984305133258327 0.0005180580224985198 0.0015194738455092816 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 23730 21941 EYFSYPVSL True PC9_epitope_Rep3 1103.51752729727 1103.51642993586 89.695 2 0.17984080257834895 0.0005180580224985198 0.0015195526317632708 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 108253 15469 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.5695299358601 68.404 2 0.17983959786707626 0.0005180580224985198 0.001519594841121985 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 134878 16158 VYVQHPITF True PC9_epitope_Rep3 1102.5811306133398 1102.58002993586 67.297 2 0.17981744247057532 0.0005180580224985198 0.0015203713071925936 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 106748 21052 STYKFFEVI True PC9_epitope_Rep1 1132.580461907 1132.57936993586 85.807 2 0.179807594254917 0.0005180580224985198 0.0015207165789293126 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 141352 5337 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 25.581 2 0.17979753289471262 0.0005180580224985198 0.0015210694044901002 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 105695 13840 SSENPWMTEY True H1975_Epitope_Rep3 1242.48630382198 1242.4852099358602 58.543 2 0.17979716048666566 0.0005180580224985198 0.0015210824654390911 ['nc|ENSG00000154429|Q6IQ19-2|CCSAP', 'ENST00000483092.1_1_1:229460984-229462796:-|nuORF', 'ENSG00000154429|ENST00000284617|CCSAP'] 108126 22557 SYDPLRIYLF True PC9_epitope_Rep1 1285.6706738937298 1285.6695699358602 91.57 2 0.17978176725983078 0.0005180580224985198 0.001521622428967604 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000480929.1_1_2:219612227-219612548:+|nuORF'] 42498 15924 IEEIKDFLLTA True H1975_Epitope_Rep3 1290.7071189721 1290.7060299358602 66.702 2 0.17978027489548337 0.0005180580224985198 0.0015216747883260407 ['ENSG00000172809|ENST00000311111|RPL38', 'ENST00000529123.2_1_17:72199871-72200367:+|nuORF', 'ENST00000530646.1_1_17:72199871-72200367:+|nuORF'] 70514 14515 LVVYPWTQRF True NCI_RA007_Epitope_Rep3 1307.7026427283497 1307.7015499358602 64.4 2 0.1797650950755591 0.0005180580224985198 0.0015222074723829377 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'HBE1|p.G73Efs*17|1|0.07|ENSG00000213931|chr11:5269551-5269551|C/-|frameshift_variant', 'ENSG00000213934|ENST00000330597|HBG1', 'ENSG00000213931|ENST00000396895|HBE1', 'ENSG00000196565|ENST00000336906|HBG2', 'CON__Q3SX09'] 22233 8741 ESYSVYVYK True H1975_Epitope_Rep3 1136.5389910178399 1136.5378899358602 38.627 2 0.17976156859813042 0.0005180580224985198 0.0015223312488304073 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 139613 14147 YLYPDITRL True H1975_Epitope_Rep1 1152.6179100448799 1152.6168099358601 59.589 2 0.17976065808004787 0.0005180580224985198 0.001522363208901431 ['ENSG00000131389|ENST00000622186|SLC6A6'] 132378 18643 VVAELLRTV True PC9_epitope_Rep1 998.61243074162 998.61132993586 76.499 2 0.1797600323495575 0.0005180580224985198 0.001522385173040449 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 54967 7981 KYQEVTNNL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 36.063 2 0.17975879055059188 0.0005180580224985198 0.0015224287631065158 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 50000 11604 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 49.514 2 0.17975159353601486 0.0005180580224985198 0.0015226814198791461 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 18106 10525 EIIDPVLDR True H1975_Epitope_Rep1 1068.5815245361598 1068.5804299358601 45.438 2 0.1797479858517099 0.0005180580224985198 0.0015228080862371336 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF'] 20835 13040 EQISDIDDAVR True PC9_epitope_Rep3 1259.59935942827 1259.5982699358601 55.184 2 0.17973018231766186 0.0005180580224985198 0.0015234333256904159 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 54742 10011 KYMEDYHQF True PC9_epitope_Rep2 1259.52810906431 1259.5264649037902 43.835 3 0.17971994239173217 0.0005180580224985198 0.0015237930564961505 ['ENSG00000118898|ENST00000345988|PPL'] 142235 19493 YWMHVQNTF True PC9_epitope_Rep3 1224.53861417836 1224.53750993586 80.211 2 0.17970966871447708 0.0005180580224985198 0.0015241540585119084 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 24073 7830 EYNTVASKF True NCI_RA007_Epitope_Rep4 1057.50802524273 1057.5069299358602 36.812 2 0.1797088707922934 0.0005180580224985198 0.0015241820999175888 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'ENST00000475640.1_1_3:122437249-122439770:+|nuORF'] 111186 16286 THIDTVINAL True PC9_epitope_Rep6 1095.59242357303 1095.5913299358601 75.004 2 0.17970741531969198 0.0005180580224985198 0.0015242332509705543 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF'] 142877 17599 YYTPITPHL True PC9_epitope_Rep2 1103.56514619603 1103.56404993586 72.972 2 0.17970726614356394 0.0005180580224985198 0.0015242384937057582 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 86551 15662 QLDMQSSWVY True H1975_Epitope_Rep2 1255.5543238121502 1255.5532299358601 65.401 2 0.1797068184345608 0.0005180580224985198 0.0015242542283676133 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 133647 10898 VYANGIRNI True PC9_epitope_Rep1 1018.5559784946599 1018.55488993586 46.804 2 0.17970221501002842 0.0005180580224985198 0.001524416024430778 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 125279 15442 VILPTVHEV True PC9_epitope_Rep2 1005.5858816406101 1005.58478993586 64.675 2 0.17970146184865757 0.0005180580224985198 0.0015244424973495556 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 47851 10567 IYHNPTANSF True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 45.635 2 0.1797012513776937 0.0005180580224985198 0.0015244498952897028 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 76921 18546 NRDPILVSL True PC9_epitope_Rep5 1025.58694426977 1025.58584993586 76.36 2 0.17969936729199726 0.0005180580224985198 0.0015245161214814053 ['ENSG00000106789|ENST00000375077|CORO2A'] 108122 19638 SYDPDFNQL True PC9_epitope_Rep5 1097.46655435357 1097.46544993586 80.592 2 0.17969530079689613 0.0005180580224985198 0.0015246590698588481 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 112615 8271 TLETVPLER True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 36.796 2 0.17969165738655332 0.0005180580224985198 0.0015247871570598158 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 5537 20790 AMIELVERL True PC9_epitope_Rep1 1072.59506642532 1072.59396993586 84.799 2 0.1796886402824538 0.0005180580224985198 0.0015248932340897854 ['ENSG00000166326|ENST00000299413|TRIM44'] 134052 20290 VYKAFVMETF True PC9_epitope_Rep5 1233.6103821362897 1233.60928993586 83.095 2 0.17968349273694578 0.0005180580224985198 0.001525074231434688 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 84889 6682 QEARPPLVSA True H1975_Epitope_Rep3 1066.5771078620598 1066.5760099358602 30.657 2 0.17968013291138554 0.0005180580224985198 0.0015251923808047888 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 1142 5435 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 25.931 2 0.17967960229784546 0.0005180580224985198 0.0015252110408427403 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 107956 8170 SVYDSVLQK True NCI_RA007_Epitope_Rep3 1037.5393253710097 1037.53822993586 39.257 2 0.17967157181478002 0.0005180580224985198 0.0015254934760329454 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 84492 14111 QALLDLHAL True NCI_RA007_Epitope_Rep5 992.5654805492001 992.56438993586 60.967 2 0.17967106315866535 0.0005180580224985198 0.0015255113674292778 ['ENSG00000087086|ENST00000331825|FTL'] 77373 12412 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45826993586 52.828 2 0.17967089325114438 0.0005180580224985198 0.00152551734377859 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 117166 15092 TVLEEIGNRV True PC9_epitope_Rep6 1128.6138872935999 1128.61278993586 70.11 2 0.1796671775767852 0.0005180580224985198 0.0015256480452586136 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 11798 5848 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 27.893 2 0.17966467368277173 0.0005180580224985198 0.0015257361278327498 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 32924 7633 GHYTEGAELVD True NCI_RA007_Epitope_Rep1 1189.5251318588498 1189.5240299358602 33.684 2 0.17965258808005488 0.0005180580224985198 0.0015261613496605696 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 55035 7764 KYSLIKGNF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 37.662 2 0.17964799022497197 0.0005180580224985198 0.0015263231525211181 ['ENSG00000143546|ENST00000368733|S100A8'] 78500 20004 NYNQHAMVFF True PC9_epitope_Rep3 1269.5600778989299 1269.5589899358602 82.192 2 0.17963719799071787 0.0005180580224985198 0.0015267030089447468 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 90955 5579 REYQVKLQA True NCI_RA007_Epitope_Rep5 1133.61930702721 1133.61766490379 28.146 3 0.17963431495957327 0.0005180580224985198 0.0015268044995955313 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 96160 14457 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65458993586 60.878 2 0.1796294221127894 0.0005180580224985198 0.00152697675677124 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 23854 19998 EYIPKWEQF True PC9_epitope_Rep3 1238.5971746003 1238.5960699358602 82.168 2 0.17962684371937196 0.0005180580224985198 0.001527067539318432 ['ENSG00000114405|ENST00000462069|C3orf14'] 77528 7868 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.5822099358602 35.24 2 0.1796247939578168 0.0005180580224985198 0.0015271397131459987 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 111011 10251 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5289149037899 44.313 3 0.17962082744897256 0.0005180580224985198 0.0015272793869618136 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 93598 8365 RQPDSGISSI True PC9_epitope_Rep2 1058.5356369729 1058.53452993586 37.547 2 0.179619961063248 0.0005180580224985198 0.0015273098969542298 ['ENSG00000163902|ENST00000296255|RPN1'] 4145 8777 AHTAEVNCL True PC9_epitope_Rep3 956.43856578392 956.43746993586 38.714 2 0.1796192300940455 0.0005180580224985198 0.0015273356386944598 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 20799 8658 EQIEAGTPGRL True PC9_epitope_Rep6 1169.6040508858898 1169.6029499358601 43.138 2 0.17960982475148538 0.0005180580224985198 0.0015276668950997808 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 139270 22370 YLIPLLERL True PC9_epitope_Rep5 1128.69068106232 1128.68958993586 91.057 2 0.17959931664353926 0.0005180580224985198 0.0015280370760576277 ['ENSG00000110367|ENST00000534980|DDX6'] 114638 7301 TQDTQPHYI True PC9_epitope_Rep2 1101.50908787189 1101.50798993586 33.468 2 0.1795968029010325 0.0005180580224985198 0.0015281256438159413 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 8912 8826 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6965849037902 40.615 3 0.17959397080837894 0.0005180580224985198 0.0015282254343012781 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115558 9084 TRSPVKVTL True PC9_epitope_Rep1 999.60767971435 999.60658993586 39.794 2 0.1795916311909692 0.0005180580224985198 0.0015283078770498108 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 126659 7681 VLNTNIDGR True PC9_epitope_Rep1 1000.53015766964 1000.52906993586 34.368 2 0.1795885916545307 0.0005180580224985198 0.0015284149899930054 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 99010 11327 SHDSTSQLYTV True PC9_epitope_Rep5 1236.5622456435601 1236.5611499358602 48.563 2 0.1795830916737778 0.0005180580224985198 0.0015286088278506538 ['ENSG00000143815|ENST00000272163|LBR'] 84222 19356 PYLFHVVTF True PC9_epitope_Rep6 1121.59096702105 1121.5898699358602 87.101 2 0.17958226121990067 0.0005180580224985198 0.001528638097983976 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 3672 6674 AGQDGSVVQFK True H1975_Epitope_Rep3 1134.56693710118 1134.5658499358601 30.626 2 0.17956389503444553 0.0005180580224985198 0.0015292855751228367 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF'] 92811 6759 RPAPPPPTV True PC9_epitope_Rep5 930.5287011176599 930.52760993586 30.969 2 0.17956115577507936 0.0005180580224985198 0.0015293821678630565 ['ENST00000464824.2_1_1:155034702-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-11|ADAM15', 'nc|ENSG00000143537|Q13444-2|ADAM15', 'nc|ENSG00000143537|Q13444-12|ADAM15', 'nc|ENSG00000143537|Q13444-5|ADAM15', 'nc|ENSG00000143537|Q13444-4|ADAM15', 'ENST00000527418.5_1_1:155025082-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-3|ADAM15', 'ENSG00000143537|ENST00000356955|ADAM15'] 26044 19613 FGIDLDTRV True PC9_epitope_Rep5 1034.53965972418 1034.53856993586 80.494 2 0.17955702423152847 0.0005180580224985198 0.0015295278673857886 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 24299 21341 EYTRALFLL True PC9_epitope_Rep5 1124.62299542532 1124.62188993586 87.147 2 0.17955418906551365 0.0005180580224985198 0.0015296278579990674 ['ENSG00000129933|ENST00000262815|MAU2'] 5401 5901 ALSTPVVEK True NCI_RA007_Epitope_Rep4 942.53859709502 942.53750993586 29.322 2 0.17955388246149148 0.0005180580224985198 0.0015296386716997388 ['GTF2E2|p.D187Tfs*6|1|0.35|ENSG00000197265|chr8:30607141-30607141|C/-|frameshift_variant', 'ENSG00000197265|ENST00000355904|GTF2E2'] 138867 11713 YKDGTELEL True PC9_epitope_Rep6 1066.51825557326 1066.51714993586 56.199 2 0.17955216724853368 0.0005180580224985198 0.001529699167424793 ['ENSG00000143815|ENST00000272163|LBR'] 54757 11970 KYNANFVTF True NCI_RA007_Epitope_Rep2 1102.54474510462 1102.54364993586 51.157 2 0.17954878330310406 0.0005180580224985198 0.0015298185265328046 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 128392 17668 VPRPAVLDPAL True PC9_epitope_Rep5 1146.67609362734 1146.6749899358601 72.974 2 0.17954457363896426 0.0005180580224985198 0.0015299670235566585 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 130115 13438 VSDPTSGLDF True H1975_Epitope_Rep2 1036.4713053808398 1036.4707749679299 56.823 1 0.17953782502608118 0.0005180580224985198 0.0015302051128046972 ['ENSG00000213047|ENST00000620048|DENND1B'] 117883 13474 TWFNQPARKI True PC9_epitope_Rep3 1259.6774906096698 1259.67583490379 56.88 3 0.179537743776038 0.0005180580224985198 0.00153020797951049 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 110838 21523 TGPTRFFLF True PC9_epitope_Rep3 1084.5705659296398 1084.56946993586 88.082 2 0.1795371025646043 0.0005180580224985198 0.0015302306032507007 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 96284 9570 RYQTQPVTL True PC9_epitope_Rep4 1104.5927579261997 1104.5916699358602 44.431 2 0.17952798309916557 0.0005180580224985198 0.0015305523998775917 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 117887 22091 TWFPKTPMLF True PC9_epitope_Rep5 1266.6471019981798 1266.64600993586 90.004 2 0.1795267956360959 0.0005180580224985198 0.001530594306621133 ['ENSG00000170852|ENST00000304056|KBTBD2'] 35830 11263 GTLEQWIEK True NCI_RA007_Epitope_Rep3 1102.56587447202 1102.56476993586 51.418 2 0.1795165926469244 0.0005180580224985198 0.0015309544275497633 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 53899 17580 KTMEDTLMTV True PC9_epitope_Rep5 1167.55154693083 1167.5504499358601 72.63 2 0.17951586815927345 0.0005180580224985198 0.001530980002025042 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 2430 10618 AEQIARWIA True H1975_Epitope_Rep1 1056.5716285587998 1056.5705299358601 45.799 2 0.17951584803906312 0.0005180580224985198 0.0015309807122762746 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 53193 6843 KQEELEAALQR True NCI_RA007_Epitope_Rep2 1313.6939285194496 1313.6928299358601 31.235 2 0.17951446594509157 0.0005180580224985198 0.001531029501519904 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 80177 14852 PFVDHVFTF True NCI_RA007_Epitope_Rep3 1107.53893144819 1107.5378299358601 65.85 2 0.17950891739808567 0.0005180580224985198 0.0015312253862332032 ['ENSG00000113460|ENST00000336767|BRIX1'] 57826 7387 LEESSPKLP True H1975_Epitope_Rep3 998.5284263341399 998.5273299358599 33.392 2 0.17950691506593516 0.0005180580224985198 0.0015312960823028372 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000544007.5_1_14:31028384-31077115:+|nuORF', 'G2E3|p.T361Ifs*2|1|0.42|ENSG00000092140|chr14:30605575-30605576|-/T|frameshift_variant', 'G2E3|p.G461Vfs*26|1|0.4|ENSG00000092140|chr14:30607950-30607950|G/-|frameshift_variant'] 115698 8849 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.58478993586 38.421 2 0.17950617524306414 0.0005180580224985198 0.0015313222039558473 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 118450 16957 TYPIKTPTF True PC9_epitope_Rep3 1066.5698972233001 1066.5688099358601 70.386 2 0.179499133762158 0.0005180580224985198 0.0015315708467851664 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 77154 14523 NRPNLYYEV True PC9_epitope_Rep5 1166.57202248162 1166.57092993586 60.861 2 0.1794760003841209 0.0005180580224985198 0.0015323879978359147 ['ENSG00000004700|ENST00000444129|RECQL'] 103157 11601 SPIENIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 49.62 2 0.1794755136795932 0.0005180580224985198 0.0015324051946162206 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 40231 11467 HQIEAVDGEEL True PC9_epitope_Rep4 1238.5778957076998 1238.57678993586 51.871 2 0.17946793030717875 0.0005180580224985198 0.0015326731636556203 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 142361 8118 YYEHVKARF True PC9_epitope_Rep5 1211.60874234351 1211.60710490379 36.165 3 0.1794640172500427 0.0005180580224985198 0.001532811455346724 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 49398 8828 KEVDLIPKV True NCI_RA007_Epitope_Rep3 1039.62774645259 1039.62664993586 41.815 2 0.17945599952325997 0.0005180580224985198 0.0015330948495702807 ['nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000492914.1_1_10:51829372-51845265:+|nuORF', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C'] 40761 15901 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.5589899358602 69.092 2 0.1794559827569083 0.0005180580224985198 0.0015330954422480122 ['ENSG00000169813|ENST00000682386|HNRNPF'] 88159 9624 QRVDSPVTV True PC9_epitope_Rep3 999.5349086969098 999.53380993586 41.97 2 0.17944995708444086 0.0005180580224985198 0.0015333084600351215 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 106141 11024 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.4600299358601 47.433 2 0.17944112400068077 0.0005180580224985198 0.0015336207781860033 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 111088 5553 THDQAVQAL True PC9_epitope_Rep4 981.4879585044899 981.48686993586 28.126 2 0.17943717827720673 0.0005180580224985198 0.001533760310763461 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 118519 15186 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.5233099358602 66.337 2 0.17943668887466205 0.0005180580224985198 0.00153377761838698 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 30186 17405 FYQPKIQQF True PC9_epitope_Rep3 1197.61824439805 1197.6171499358602 72.117 2 0.17943046061421758 0.0005180580224985198 0.001533997896666688 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 104121 3636 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 20.104 2 0.17942997254827378 0.0005180580224985198 0.001534015159699774 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 126344 20763 VLIPKLPQL True PC9_epitope_Rep3 1019.6743027221899 1019.67320993586 85.134 2 0.17942571693707873 0.0005180580224985198 0.0015341656901409388 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 92513 18345 RLYDGLFKVI True PC9_epitope_Rep6 1222.70739375562 1222.70575490379 83.206 3 0.17942311796986424 0.0005180580224985198 0.0015342576286747575 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 133754 4453 VYEGERPLTK True NCI_RA007_Epitope_Rep1 1190.6295373577398 1190.62789490379 21.43 3 0.17941933864219264 0.0005180580224985198 0.001534391332339775 ['ENSG00000044574|ENST00000324460|HSPA5'] 124732 18274 VHAPPMQLGF True PC9_epitope_Rep2 1095.5535359665098 1095.5524299358601 75.612 2 0.17941900024752125 0.0005180580224985198 0.0015344033045113985 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 10117 19844 AYVGDLQTL True PC9_epitope_Rep1 978.5022115863 978.5016649679301 81.146 1 0.1794068820431699 0.0005180580224985198 0.001534832099963808 ['ENSG00000065802|ENST00000264607|ASB1'] 140798 8720 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 38.502 2 0.17939646972863318 0.0005180580224985198 0.0015352006294021678 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 36862 22261 GVLKVFLENV True PC9_epitope_Rep3 1116.6542955536 1116.6531899358602 90.913 2 0.17938178205006955 0.0005180580224985198 0.0015357206301432709 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 111469 9952 THTTPVLL True PC9_epitope_Rep6 880.5018176634799 880.50072993586 48.81 2 0.1793769159737364 0.0005180580224985198 0.0015358929470124976 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 120662 7706 VEILANDQGNR True PC9_epitope_Rep5 1227.6207635791898 1227.6196699358602 34.584 2 0.17937507484242632 0.0005180580224985198 0.0015359581499682304 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 119752 8754 VAYGKGTYF True H1975_Epitope_Rep2 1004.4967322830399 1004.49562993586 38.636 2 0.17936875032252006 0.0005180580224985198 0.0015361821515271431 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 85102 9687 QELDGELEA True H1975_Epitope_Rep2 1002.4505699362599 1002.4499749679301 42.242 1 0.1793598461605304 0.0005180580224985198 0.0015364975742039088 ['ENSG00000089154|ENST00000300648|GCN1'] 27958 10809 FQESSVKEL True PC9_epitope_Rep3 1065.5342399905699 1065.5331499358601 46.545 2 0.17934974796176556 0.0005180580224985198 0.0015368553731744791 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 35408 6693 GSDKINYTY True H1975_Epitope_Rep2 1059.48728979815 1059.48618993586 30.654 2 0.17934544799166935 0.0005180580224985198 0.0015370077548779004 ['ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 8472 7069 ATQSFSTFR True NCI_RA007_Epitope_Rep4 1043.50360856863 1043.5025099358602 33.815 2 0.17934446946698068 0.0005180580224985198 0.001537042433804924 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 108377 17471 SYLERHGLINF True PC9_epitope_Rep2 1347.6935345966297 1347.6924299358602 72.454 2 0.17932690412453778 0.0005180580224985198 0.001537665083098102 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 82929 19275 PSDIFMVMEY True H1975_Epitope_Rep2 1230.53008321026 1230.5289899358602 80.0 2 0.1793264660124771 0.0005180580224985198 0.0015376806163500006 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 107416 18330 SVLNVLHSL True PC9_epitope_Rep6 980.5654805492 980.56438993586 83.148 2 0.1793158977029069 0.0005180580224985198 0.0015380553631291936 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L'] 107009 10088 SVFESLIAKK True NCI_RA007_Epitope_Rep4 1120.6492101731599 1120.64810993586 45.653 2 0.17931394448327434 0.0005180580224985198 0.0015381246333013902 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 24765 9776 FASHVSPEV True PC9_epitope_Rep3 971.47124581119 971.47014993586 42.557 2 0.1793065610891645 0.0005180580224985198 0.0015383865107298131 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 76706 16678 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53911496793 68.981 1 0.17930499785755288 0.0005180580224985198 0.0015384419618366075 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 54957 6791 KYQEVTNNL True NCI_RA007_Epitope_Rep2 1107.5560380643099 1107.5549499358601 31.032 2 0.1793046178376985 0.0005180580224985198 0.0015384554422411135 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 142401 12224 YYEYNHDLF True NCI_RA007_Epitope_Rep5 1262.5244035828598 1262.5233099358602 53.672 2 0.1793033612200146 0.0005180580224985198 0.001538500018951221 ['ENSG00000151748|ENST00000324679|SAV1'] 131103 11982 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.52277496793 51.096 1 0.1792987871657257 0.0005180580224985198 0.001538662287893838 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 90725 11576 REQYLELVSA True H1975_Epitope_Rep2 1206.6244519773 1206.62334993586 49.592 2 0.1792959865275376 0.0005180580224985198 0.0015387616516698188 ['ENSG00000084092|ENST00000264230|NOA1'] 138064 12432 YGEPGEVFINK True PC9_epitope_Rep6 1251.6135529404298 1251.61244993586 59.248 2 0.17929308915122585 0.0005180580224985198 0.001538864454380337 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 17836 6154 EHTQTVSQL True PC9_epitope_Rep1 1041.50908787189 1041.50798993586 28.486 2 0.1792811059979182 0.0005180580224985198 0.0015392897054493087 ['ENSG00000135968|ENST00000309863|GCC2'] 99210 13748 SHLQQPLMV True PC9_epitope_Rep5 1051.54845058607 1051.5473499358602 57.903 2 0.17927605646653766 0.0005180580224985198 0.001539468935490306 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 50001 11695 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 49.86 2 0.17927118322024455 0.0005180580224985198 0.0015396419282232311 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 11930 18546 DHMRFISEL True PC9_epitope_Rep3 1146.54917886206 1146.5480899358602 76.557 2 0.179270926538788 0.0005180580224985198 0.0015396510405591994 ['ENSG00000273749|ENST00000617928|CYFIP1'] 93545 10602 RQLGLPTAL True NCI_RA007_Epitope_Rep3 967.5814649665099 967.58036993586 48.753 2 0.1792656409738141 0.0005180580224985198 0.001539838693097432 ['ENSG00000053372|ENST00000330263|MRTO4'] 54578 20648 KYITDWQNVF True PC9_epitope_Rep2 1312.6451874218799 1312.6440899358602 84.859 2 0.17925521783344978 0.0005180580224985198 0.0015402088112663175 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 87004 16539 QMISRIEYI True PC9_epitope_Rep4 1151.60088008175 1151.5997899358601 71.591 2 0.1792537461411468 0.0005180580224985198 0.0015402610771740259 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 128756 20664 VPYLVGQVV True PC9_epitope_Rep2 972.5644179200399 972.56332993586 84.921 2 0.17925352946992887 0.0005180580224985198 0.0015402687722191625 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 31990 5765 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 27.169 2 0.17925206553673498 0.0005180580224985198 0.001540320764591587 ['ENSG00000108344|ENST00000264639|PSMD3'] 97795 8199 SELEAALQR True NCI_RA007_Epitope_Rep2 1015.5298233164699 1015.52872993586 36.528 2 0.17925041698467647 0.0005180580224985198 0.001540379315906664 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 14130 8496 DSDFRKDDFY True H1975_Epitope_Rep1 1306.5465955794198 1306.5454899358601 37.609 2 0.17924872600899622 0.0005180580224985198 0.0015404393762899831 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 71318 22738 LYQFNPAFF True PC9_epitope_Rep2 1145.5545815123298 1145.5534899358602 92.958 2 0.17924542140517088 0.0005180580224985198 0.0015405567565847525 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 4818 5596 ALEENNNFSK True PC9_epitope_Rep1 1164.54111627616 1164.54000993586 26.353 2 0.17924413848706866 0.0005180580224985198 0.0015406023285478823 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2'] 114939 9431 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 46.501 2 0.1792427400996441 0.0005180580224985198 0.0015406520037636998 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 54825 17342 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 71.59 2 0.1792349184807455 0.0005180580224985198 0.0015409298823942292 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 29270 11582 FVAESHIIL True H1975_Epitope_Rep3 1027.57023157647 1027.56912993586 49.679 2 0.1792347509871525 0.0005180580224985198 0.0015409358334876493 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 68177 5244 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep3 1056.49099566004 1056.4898899358602 25.255 2 0.17921608897379673 0.0005180580224985198 0.0015415990441680946 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 87917 9787 QRLAEPSQL True PC9_epitope_Rep1 1040.56145779792 1040.56036993586 42.507 2 0.17921365141795068 0.0005180580224985198 0.0015416856911452544 ['ENSG00000173801|ENST00000393931|JUP'] 23725 20129 EYFKSFNF True PC9_epitope_Rep5 1080.4916469026 1080.4905499358601 82.474 2 0.17921272521054785 0.0005180580224985198 0.0015417186160070835 ['ENSG00000151470|ENST00000425929|C4orf33'] 141953 20113 YVIDPIKGLKL True PC9_epitope_Rep5 1257.7696596590097 1257.7680149037901 82.412 3 0.17921069465419232 0.0005180580224985198 0.0015417908007793809 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 21956 4459 ESEELTAER True NCI_RA007_Epitope_Rep2 1062.4829326937 1062.48182993586 21.978 2 0.1792104435468348 0.0005180580224985198 0.0015417997276949147 ['ENSG00000185624|ENST00000331483|P4HB'] 32645 9154 GGNFGFGDSR True PC9_epitope_Rep4 1012.4362572847999 1012.43516993586 42.804 2 0.17920826932643902 0.0005180580224985198 0.0015418770238191022 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 88978 8601 QVIGVVLQK True NCI_RA007_Epitope_Rep5 982.6175161220598 982.61640993586 39.761 2 0.17920216157996852 0.0005180580224985198 0.0015420941822495832 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 22378 15973 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69127496793 66.64 1 0.1792012719121578 0.0005180580224985198 0.001542125816581487 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 140893 5388 YSEEECRQY True H1975_Epitope_Rep3 1205.46590273057 1205.46480993586 25.79 2 0.1791877199440536 0.0005180580224985198 0.001542607770590159 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 142854 14615 YYTDIM[Oxidation]HTL True PC9_epitope_Rep2 1171.5219614351497 1171.5208699358602 61.486 2 0.1791827405901039 0.0005180580224985198 0.0015427848912292746 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 62054 10115 LLDTAQRALY True H1975_Epitope_Rep2 1162.6346227381798 1162.63352993586 43.904 2 0.1791672421297805 0.0005180580224985198 0.0015433363174846163 ['ENSG00000249471|ENST00000336614|ZNF324B', 'ENSG00000083812|ENST00000196482|ZNF324'] 87470 9033 QQDPQQYNV True PC9_epitope_Rep2 1118.49925146418 1118.49814993586 40.093 2 0.17916346611505962 0.0005180580224985198 0.0015434706958135707 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 78535 12155 NYPQSVPRL True PC9_epitope_Rep4 1072.56654317836 1072.5654499358602 54.572 2 0.17916312111516275 0.0005180580224985198 0.0015434829740273946 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 125995 8251 VLDQGKITEY True H1975_Epitope_Rep2 1164.60265390356 1164.60154993586 36.69 2 0.17915773103303043 0.0005180580224985198 0.0015436748145618235 ['ENSG00000135776|ENST00000344517|ABCB10'] 141146 9793 YSSPYPQEY True H1975_Epitope_Rep3 1132.4713053808398 1132.47020993586 42.693 2 0.17915490604122522 0.0005180580224985198 0.0015437753694967217 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant'] 86012 13444 QHNDLEFKL True PC9_epitope_Rep2 1142.57202248162 1142.57038490379 56.993 3 0.1791415153509365 0.0005180580224985198 0.0015442520973170644 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 54846 16927 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 71.869 2 0.1791398040520668 0.0005180580224985198 0.0015443130326432129 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 45836 9830 ISDLIRDSY True H1975_Epitope_Rep2 1080.54513902744 1080.5440499358601 42.797 2 0.1791347063611206 0.0005180580224985198 0.0015444945636978395 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 90984 16630 RFEEAHFTF True PC9_epitope_Rep1 1182.5458077337796 1182.54415490379 68.796 3 0.17913424946270712 0.0005180580224985198 0.0015445108350984691 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 91213 13543 RGDLPFVVPR True PC9_epitope_Rep4 1154.6560268890998 1154.65438490379 59.989 3 0.17913078890234008 0.0005180580224985198 0.001544634080682377 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 133944 10741 VYIKHPVSL True PC9_epitope_Rep5 1054.61751612206 1054.61640993586 46.307 2 0.1791298588590904 0.0005180580224985198 0.0015446672052412858 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 73345 7424 MTEGSTVNTEY True H1975_Epitope_Rep1 1230.50743318938 1230.50632993586 33.56 2 0.17912548747866455 0.0005180580224985198 0.0015448229065104329 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 20797 9186 EQIEAGTPGRL True PC9_epitope_Rep4 1169.6040508858898 1169.6029499358601 42.927 2 0.17912258431218994 0.0005180580224985198 0.0015449263211389154 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 125945 10689 VLDELTLAR True H1975_Epitope_Rep1 1028.5866099165999 1028.58550993586 46.074 2 0.17911705380251602 0.0005180580224985198 0.0015451233443955045 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 11173 11183 DDPHAC[Carbamidomethyl]YSTVF True H1975_Epitope_Rep1 1310.5237522392902 1310.52264993586 47.984 2 0.17910719584445023 0.0005180580224985198 0.0015454745945205823 ['CON__P02769'] 7608 18531 ASFNDTFVHV True PC9_epitope_Rep5 1135.5298233164701 1135.5287299358602 76.302 2 0.1791058038747716 0.0005180580224985198 0.0015455241984089407 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 126828 21335 VLPVRYFYL True PC9_epitope_Rep3 1168.6644663144798 1168.6633699358601 87.36 2 0.17910506240910795 0.0005180580224985198 0.0015455506217476032 ['KDELC2|p.P92Ffs*17|1|0.05|ENSG00000178202|chr11:108491096-108491097|-/AATGATGTAAAAATACAAAA|frameshift_variant', 'ENSG00000178202|ENST00000323468|POGLUT3'] 41215 18953 HVLDTLIQL True PC9_epitope_Rep6 1050.60734536118 1050.6062499358602 85.549 2 0.17910183364130924 0.0005180580224985198 0.001545665689432026 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 8034 5691 ATDMPVKNQY True H1975_Epitope_Rep2 1165.54375912845 1165.5426699358602 26.888 2 0.17910019746741304 0.0005180580224985198 0.0015457240031082006 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 97723 6785 SEIGAITRSA True H1975_Epitope_Rep3 1003.52982331647 1003.52872993586 31.053 2 0.17909508725053697 0.0005180580224985198 0.0015459061467983906 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3'] 98256 10265 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 44.535 2 0.17909312506183503 0.0005180580224985198 0.0015459760908913545 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 118000 12853 TYDSVTDKF True PC9_epitope_Rep1 1074.48695544498 1074.4858499358602 54.313 2 0.17909022824148013 0.0005180580224985198 0.001546079356618321 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 7957 7486 ATAVM[Oxidation]PDGQFK True PC9_epitope_Rep1 1179.5594095730296 1179.55830993586 33.613 2 0.17909016922443888 0.0005180580224985198 0.0015460814605270797 ['ENSG00000117450|ENST00000319248|PRDX1'] 130113 3790 VSDPSSPQYGK True NCI_RA007_Epitope_Rep4 1163.5458673034298 1163.5447699358601 20.755 2 0.1790900420692048 0.0005180580224985198 0.001546085993515863 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1'] 90589 9072 REMEENFAVEA True H1975_Epitope_Rep1 1323.57651580871 1323.57540993586 39.8 2 0.17908961808758703 0.0005180580224985198 0.0015461011082389393 ['ENSG00000026025|ENST00000544301|VIM'] 96036 20686 RYLPTGSFPF True PC9_epitope_Rep5 1183.6025943339098 1183.6014899358602 84.624 2 0.1790810146114853 0.0005180580224985198 0.001546407849644402 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 141669 21357 YTTDFIYQL True PC9_epitope_Rep4 1162.55464108198 1162.55354993586 90.317 2 0.17907807833694336 0.0005180580224985198 0.0015465125511640479 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 4151 8745 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 38.58 2 0.17907523817977275 0.0005180580224985198 0.0015466138320920676 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 90674 5515 REQEITAVQA True H1975_Epitope_Rep3 1143.58840082175 1143.58730993586 26.262 2 0.17907286065656983 0.0005180580224985198 0.0015466986204515029 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 108277 17996 SYIELPAYL True NCI_RA007_Epitope_Rep4 1067.55391280599 1067.55280993586 77.868 2 0.17906676160077162 0.0005180580224985198 0.001546916149164692 ['ENSG00000162511|ENST00000294507|LAPTM5'] 2835 7527 AEVDRQVIP True H1975_Epitope_Rep2 1025.5505587610498 1025.54946993586 33.903 2 0.1790664237606479 0.0005180580224985198 0.0015469281994546324 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 101522 18771 SLLENLEKI True PC9_epitope_Rep6 1057.60192562757 1057.60082993586 84.843 2 0.17905797710334062 0.0005180580224985198 0.0015472295106056424 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 76405 13312 NQDDSILKV True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 56.217 2 0.17905709525071956 0.0005180580224985198 0.0015472609716494807 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 77134 19353 NRPEFITEF True PC9_epitope_Rep1 1151.56112344475 1151.56002993586 79.247 2 0.17905455672600692 0.0005180580224985198 0.0015473515398354086 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 27878 13164 FQDPYTRSL True PC9_epitope_Rep4 1125.54547338061 1125.54436993586 58.532 2 0.1790518268101364 0.0005180580224985198 0.0015474489423034361 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 109629 8471 TEAGM[Oxidation]FAIRA True H1975_Epitope_Rep2 1081.5226301414898 1081.5215299358601 37.535 2 0.17905093722742055 0.0005180580224985198 0.0015474806836384102 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'PSMC2|p.R400L|1|0.49|ENSG00000161057|chr7:103367951-103367951|G/T|missense_variant', 'nc|ENSG00000161057|P35998-2|PSMC2'] 77191 6573 NRSEVQANL True PC9_epitope_Rep1 1029.52032126193 1029.51922993586 30.086 2 0.17904904422728996 0.0005180580224985198 0.0015475482302320556 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 26350 22038 FHSEIEDFLL True PC9_epitope_Rep5 1248.60265390356 1248.60154993586 89.796 2 0.1790447686808267 0.0005180580224985198 0.0015477008024214866 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 30107 20647 FYLEGGFSKF True PC9_epitope_Rep3 1193.57571087973 1193.57460993586 84.69 2 0.17904177577228134 0.0005180580224985198 0.001547807612848254 ['ENSG00000139318|ENST00000279488|DUSP6'] 142684 14942 YYPSTPGRYSI True PC9_epitope_Rep5 1302.6244519773 1302.62334993586 62.478 2 0.17904078975713492 0.0005180580224985198 0.0015478428032112922 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 59011 11140 LEVNEAELLR True H1975_Epitope_Rep3 1184.6401020414398 1184.63900993586 47.946 2 0.17904067546266533 0.0005180580224985198 0.0015478468823727546 ['ENSG00000177469|ENST00000357037|CAVIN1'] 39172 7347 HIDSANALY True H1975_Epitope_Rep3 1002.4770594676199 1002.47596993586 33.237 2 0.17903022565454219 0.0005180580224985198 0.0015482198807846132 ['ENSG00000105186|ENST00000306065|ANKRD27'] 1023 8004 AEAEFYRQV True H1975_Epitope_Rep1 1111.5298233164701 1111.5287299358602 35.731 2 0.1790152927800706 0.0005180580224985198 0.0015487530553120045 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 120661 7607 VEILANDQGNR True PC9_epitope_Rep5 1227.6207635791898 1227.6196699358602 34.209 2 0.1790151619450767 0.0005180580224985198 0.0015487577275552953 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 90675 5609 REQEITAVQA True H1975_Epitope_Rep3 1143.58840082175 1143.58730993586 26.614 2 0.17901441890225758 0.0005180580224985198 0.0015487842625957987 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 31248 16469 GDEELDSLIK True PC9_epitope_Rep2 1117.5502839775297 1117.54918993586 68.588 2 0.17901066886172237 0.0005180580224985198 0.0015489181884458028 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 62028 18654 LLDRFLATV True PC9_epitope_Rep6 1046.61243074162 1046.61132993586 84.396 2 0.17899795346032008 0.0005180580224985198 0.0015493723821501358 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 64923 9169 LQEEMLQR True PC9_epitope_Rep1 1045.52262976105 1045.5215299358601 40.118 2 0.17899586487887142 0.0005180580224985198 0.0015494469989641387 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 31518 19311 GEDFLSWNDL True H1975_Epitope_Rep2 1194.51931820242 1194.51822993586 80.148 2 0.17899561129459962 0.0005180580224985198 0.0015494560587794878 ['ENSG00000183856|ENST00000361170|IQGAP3'] 88034 14726 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 61.465 2 0.17899500905789084 0.0005180580224985198 0.0015494775751269656 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 108948 8957 TADVHGLYY True H1975_Epitope_Rep3 1037.48181049489 1037.4807099358602 39.448 2 0.17898951729684354 0.0005180580224985198 0.001549673795240732 ['ENST00000476493.5_1_1:33099602-33116090:-|nuORF'] 48379 10942 IYTNLNQKI True PC9_epitope_Rep4 1105.61315901761 1105.61206993586 49.857 2 0.17898394897603 0.0005180580224985198 0.0015498727762424942 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 62631 22741 LLLEILHEI True PC9_epitope_Rep5 1091.6590465808702 1091.6579499358602 92.478 2 0.17898266344701552 0.0005180580224985198 0.0015499187175787978 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 14671 6077 DVGKDQEFTVK True NCI_RA007_Epitope_Rep2 1264.6299312805597 1264.62829490379 28.244 3 0.1789800330706456 0.0005180580224985198 0.0015500127243800873 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 84173 21690 PYISNIYLI True PC9_epitope_Rep4 1094.60119735158 1094.60010993586 91.632 2 0.17897523692921735 0.0005180580224985198 0.001550184147979952 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 116852 9303 TVESLEETLK True H1975_Epitope_Rep3 1147.59723416995 1147.59612993586 40.779 2 0.1789746006672528 0.0005180580224985198 0.0015502068906703235 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 39058 18146 HHSNILLTF True PC9_epitope_Rep5 1080.5716285588 1080.5705299358601 74.808 2 0.17897314022142163 0.0005180580224985198 0.001550259094437765 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 137516 7774 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 34.85 2 0.17897104487592683 0.0005180580224985198 0.0015503339958265307 ['ENSG00000127184|ENST00000247655|COX7C'] 140673 16953 YRVFTTQEL True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 70.033 2 0.17896839505342332 0.0005180580224985198 0.001550428723050774 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 14771 9648 DVNQQEFVR True PC9_epitope_Rep1 1133.5465360097699 1133.54542993586 41.966 2 0.17896219332519794 0.0005180580224985198 0.0015506504483013557 ['ENSG00000105372|ENST00000598742|RPS19'] 54033 13064 KVIDEIYRV True PC9_epitope_Rep2 1133.64445914589 1133.64280490379 55.529 3 0.1789507087355897 0.0005180580224985198 0.0015510611311950215 ['ENSG00000143756|ENST00000366862|FBXO28'] 134100 16847 VYKTIMEQF True PC9_epitope_Rep4 1157.57908200801 1157.5779899358602 72.784 2 0.1789506200332915 0.0005180580224985198 0.0015510643035666024 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 133653 11134 VYANGIRNI True PC9_epitope_Rep3 1018.5559784946599 1018.55488993586 47.827 2 0.17894927675026373 0.0005180580224985198 0.0015511123458774093 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 141815 7415 YVDDPYQKY True H1975_Epitope_Rep1 1189.5291546101298 1189.52804993586 33.526 2 0.17894493260290606 0.0005180580224985198 0.001551267723844745 ['ENSG00000132313|ENST00000337109|MRPL35', 'MRPL35|p.W171C|1|0.36|ENSG00000132313|chr2:86210614-86210614|G/T|missense_variant'] 17768 18347 EHSLPTLGL True PC9_epitope_Rep1 965.51819600361 965.51708993586 75.361 2 0.17894109313586093 0.0005180580224985198 0.0015514050637923313 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 105163 10079 SRFPQGAQL True PC9_epitope_Rep4 1002.5246783663797 1002.52358993586 46.438 2 0.1789407929301922 0.0005180580224985198 0.0015514158028354127 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 21290 13718 ERDYTYEEL True PC9_epitope_Rep5 1216.5247975056798 1216.52370993586 57.793 2 0.17893991803323345 0.0005180580224985198 0.001551447100324495 ['ENSG00000125977|ENST00000374980|EIF2S2'] 89056 10761 QVLSEVSRV True PC9_epitope_Rep2 1015.56620882519 1015.56510993586 46.711 2 0.17893535407976716 0.0005180580224985198 0.001551610375844981 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 107154 15868 SVIEQGGIQTV True PC9_epitope_Rep5 1129.59790287629 1129.5968099358602 66.028 2 0.17893443382479282 0.0005180580224985198 0.0015516433000690951 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 98222 4098 SETSGIARP True NCI_RA007_Epitope_Rep4 916.4614094034799 916.46030993586 22.039 2 0.1789208967796507 0.0005180580224985198 0.0015521276996589629 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 35855 13481 GTMEWIMIK True NCI_RA007_Epitope_Rep3 1107.54567370475 1107.5445699358602 60.318 2 0.1789204020126336 0.0005180580224985198 0.001552145406904371 ['ENSG00000168273|ENST00000477703|UQCC5'] 142829 8654 YYSPTKNEI True PC9_epitope_Rep4 1113.53423999057 1113.5331499358601 40.779 2 0.17890828369248143 0.0005180580224985198 0.0015525791733477772 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 108400 16964 SYLKQLPHF True PC9_epitope_Rep1 1131.6076797143498 1131.60604490379 70.074 3 0.1789054957858972 0.0005180580224985198 0.0015526789816135698 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 35126 18735 GQWASVIRV True PC9_epitope_Rep3 1014.5610638750999 1014.55996993586 77.286 2 0.17889362747694182 0.0005180580224985198 0.0015531039441509349 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 68326 16128 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.5222499358601 67.381 2 0.17889205793139235 0.0005180580224985198 0.0015531601527970255 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 140411 21467 YRFLIQNVL True PC9_epitope_Rep1 1164.6655289436399 1164.6644299358602 87.415 2 0.1788880058673918 0.0005180580224985198 0.00155330527494332 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000472894.1_1_9:95018893-95021273:-|nuORF'] 90831 8840 RETETVFVP True NCI_RA007_Epitope_Rep3 1076.5502244078798 1076.54912993586 41.864 2 0.1788838499440456 0.0005180580224985198 0.001553454130857127 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 131426 14236 VTIEDVQKL True PC9_epitope_Rep6 1043.58627556343 1043.5851699358602 66.65 2 0.17888131804056287 0.0005180580224985198 0.001553544825002771 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 17371 16229 EHDGSLFQAV True PC9_epitope_Rep5 1101.50908787189 1101.50798993586 67.414 2 0.17887612668238845 0.0005180580224985198 0.0015537307988342415 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 35453 9561 GSHSMRYFFT True H1975_Epitope_Rep2 1231.5444278347898 1231.5433299358601 41.75 2 0.17887412938774833 0.0005180580224985198 0.0015538023553254207 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 111331 5323 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 25.316 2 0.1788583813470324 0.0005180580224985198 0.0015543666714172193 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 40521 5547 HRDYETATL True PC9_epitope_Rep4 1104.51998690876 1104.5188899358602 28.103 2 0.17885153152634006 0.0005180580224985198 0.001554612192306451 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 47859 15428 IYHTGTFAQI True PC9_epitope_Rep5 1149.5818588893299 1149.5807699358602 64.353 2 0.17885018290845947 0.0005180580224985198 0.001554660535938775 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'LONP1|p.M552Hfs*3|1|0.14|ENSG00000196365|chr19:5699059-5699060|-/C|frameshift_variant', 'ENST00000587552.5_1_19:5708410-5719801:-|nuORF'] 72354 10471 M[Oxidation]ISDAIPELK True H1975_Epitope_Rep3 1131.58456169171 1131.5834699358602 45.34 2 0.17884846704064944 0.0005180580224985198 0.00155472204648191 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2'] 48141 20154 IYPHGLVLL True PC9_epitope_Rep2 1023.61170246563 1023.61060993586 82.934 2 0.17884345077316124 0.0005180580224985198 0.0015549018839533235 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 35027 17361 GQVDMDIKL True PC9_epitope_Rep5 1017.51648175145 1017.51538993586 71.779 2 0.17884041848092194 0.0005180580224985198 0.0015550106043236958 ['ENSG00000129250|ENST00000320785|KIF1C', 'KIF1C|p.D675Gfs*5|1|0.04|ENSG00000129250|chr17:5022102-5022103|-/G|frameshift_variant'] 25407 12320 FEDENFILK True NCI_RA007_Epitope_Rep1 1153.5655401188499 1153.56444993586 51.893 2 0.17883991659854376 0.0005180580224985198 0.0015550285996423715 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 115596 5849 TRTNHIETL True PC9_epitope_Rep5 1083.56727145435 1083.5661699358602 27.491 2 0.1788366315269673 0.0005180580224985198 0.0015551463931692037 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 43207 12402 IFIKDSNSL True PC9_epitope_Rep4 1035.56006081559 1035.5589699358602 55.508 2 0.17882648290026087 0.0005180580224985198 0.00155551035114876 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 141216 11126 YTAEPVTL True H1975_Epitope_Rep2 892.45419876472 892.4536549679301 47.831 1 0.1788156259324584 0.0005180580224985198 0.0015558998066764402 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA', 'ENST00000482611.5_1_10:103552686-103559078:-|nuORF'] 13308 4869 DLTQTASSTAR True H1975_Epitope_Rep3 1149.56257999673 1149.5614899358602 23.855 2 0.17881326949218443 0.0005180580224985198 0.0015559843485816666 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 31329 14362 GDLGIEIPAEK True PC9_epitope_Rep6 1140.60265390356 1140.60154993586 67.139 2 0.1788114464266378 0.0005180580224985198 0.0015560497577821015 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 134681 15018 VYTDFAFRI True NCI_RA007_Epitope_Rep4 1130.5760452328998 1130.57494993586 65.278 2 0.1788094436888099 0.0005180580224985198 0.0015561216165631943 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 134712 10662 VYTPVASRQSL True PC9_epitope_Rep2 1219.65608645875 1219.6549899358602 46.324 2 0.17880227469962268 0.0005180580224985198 0.0015563788691038158 ['ENSG00000070950|ENST00000264926|RAD18'] 9611 20608 AYALLLQHL True PC9_epitope_Rep5 1040.60186605792 1040.6007699358602 84.317 2 0.17879853627185086 0.0005180580224985198 0.0015565130360231869 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF'] 141828 6488 YVDEEGNLVK True H1975_Epitope_Rep2 1164.5662683948397 1164.56516993586 29.872 2 0.17879625214876244 0.0005180580224985198 0.001556595015692827 ['ENST00000474787.1_1_9:139974466-139974655:+|nuORF', 'nc|ENSG00000197355|Q3KQV9-2|UAP1L1', 'ENSG00000197355|ENST00000409858|UAP1L1'] 70839 12982 LYDIDVAK True PC9_epitope_Rep5 935.49639792987 935.49530993586 54.944 2 0.178791357430661 0.0005180580224985198 0.0015567707070311269 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF'] 26270 20716 FHFQDQQILTL True PC9_epitope_Rep2 1388.7088503075997 1388.7077499358602 85.12 2 0.17878263111656362 0.0005180580224985198 0.001557083979207971 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 45580 20008 IQTAVRLLL True PC9_epitope_Rep1 1025.6597152872098 1025.65860993586 81.789 2 0.17878158207407033 0.0005180580224985198 0.0015571216437848 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 15304 8876 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep5 1252.5506357944798 1252.5495299358602 39.085 2 0.17877412828840702 0.0005180580224985198 0.0015573892890465202 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 109079 5712 TALIHDGLAR True NCI_RA007_Epitope_Rep5 1065.5930922793698 1065.59198993586 28.659 2 0.17877270413822247 0.0005180580224985198 0.001557440431666972 ['ENSG00000112306|ENST00000230050|RPS12', 'ENST00000484616.2_1_6:133135907-133136327:+|nuORF'] 132760 9945 VVINYSIVK True NCI_RA007_Epitope_Rep5 1033.6171817688898 1033.6160899358601 44.894 2 0.17877198563438954 0.0005180580224985198 0.0015574662344780155 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 36413 21031 GVFPDNFVKL True PC9_epitope_Rep3 1134.60734536118 1134.6062499358602 86.174 2 0.17876698745475353 0.0005180580224985198 0.0015576457402699559 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 115356 14810 TRISNDLEL True PC9_epitope_Rep3 1059.5560380643099 1059.5549499358601 62.101 2 0.1787626728608548 0.0005180580224985198 0.001557800712270355 ['ENSG00000007047|ENST00000262891|MARK4'] 86184 20506 QIFNGTFVKL True PC9_epitope_Rep1 1165.64954452633 1165.64844993586 83.688 2 0.17876239590790186 0.0005180580224985198 0.001557810660420769 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 44157 20749 IITDLLRSV True PC9_epitope_Rep3 1028.62299542532 1028.62188993586 85.079 2 0.17876095518031887 0.0005180580224985198 0.0015578624123839307 ['ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1'] 22240 8951 ESYSVYVYK True NCI_RA007_Epitope_Rep5 1136.5389910178399 1136.5378899358602 41.09 2 0.17875860189919004 0.0005180580224985198 0.0015579469476257532 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 106192 8224 STDPSVLGKY True H1975_Epitope_Rep3 1065.5342399905699 1065.53367496793 36.616 1 0.17874725376661568 0.0005180580224985198 0.0015583546630197097 ['ENSG00000114315|ENST00000232424|HES1'] 47976 14457 IYKDSSTFL True PC9_epitope_Rep5 1072.5440763982801 1072.5429699358601 60.609 2 0.17874666962256322 0.0005180580224985198 0.001558375653023323 ['ENSG00000145388|ENST00000388822|METTL14'] 132920 15064 VVMQEGLAHI True PC9_epitope_Rep2 1095.5746653339097 1095.5735699358602 63.201 2 0.17873850739471642 0.0005180580224985198 0.0015586689753602544 ['ENSG00000152684|ENST00000274311|PELO'] 92468 12356 RLTEEFQNV True PC9_epitope_Rep2 1134.56693710118 1134.5658499358601 52.837 2 0.1787369701462865 0.0005180580224985198 0.001558724224958993 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000486040.1_1_7:2274759-2277695:-|nuORF'] 54840 16676 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 72.309 2 0.17873388507507249 0.0005180580224985198 0.001558835110123998 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 94898 11147 RTDYGQVFTY True H1975_Epitope_Rep2 1248.5775017848798 1248.57640993586 47.914 2 0.17873344383661138 0.0005180580224985198 0.0015588509699822376 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 137510 6417 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 29.606 2 0.1787240478772311 0.0005180580224985198 0.0015591887363550934 ['ENSG00000127184|ENST00000247655|COX7C'] 49115 4884 KEIQDSQVP True H1975_Epitope_Rep2 1042.5294889633 1042.52838993586 23.871 2 0.17872179854944698 0.0005180580224985198 0.0015592696061671651 ['ENSG00000132688|ENST00000368223|NES'] 7798 10866 ASVAWAVLK True NCI_RA007_Epitope_Rep3 943.5491022090699 943.54800993586 49.802 2 0.17871792547336798 0.0005180580224985198 0.0015594088642529925 ['ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3'] 17597 12467 EHINEGETAML True PC9_epitope_Rep1 1242.55505208814 1242.5539499358601 52.82 2 0.1787141638640336 0.0005180580224985198 0.001559544126430577 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 12424 19396 DIVAINDPFI True H1975_Epitope_Rep1 1115.58627556343 1115.5851699358602 80.788 2 0.1787122634397724 0.0005180580224985198 0.001559612467480952 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 107310 19168 SVLDVDGMKV True PC9_epitope_Rep1 1061.54269649929 1061.5415899358602 78.524 2 0.1787120215315613 0.0005180580224985198 0.0015596211669438097 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 116598 4965 TVADKIHSV True PC9_epitope_Rep4 968.52909504048 968.52798993586 25.704 2 0.17870545324533452 0.0005180580224985198 0.0015598573931391458 ['ENSG00000276023|ENST00000617516|DUSP14'] 47934 14118 IYIKQIKTF True PC9_epitope_Rep3 1152.6906810623198 1152.68958993586 59.39 2 0.178697390483894 0.0005180580224985198 0.0015601474166317792 ['ENSG00000103479|ENST00000262133|RBL2'] 54853 21987 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 89.394 2 0.17869669174314998 0.0005180580224985198 0.0015601725533964336 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 115852 7899 TSDYVSQSY True H1975_Epitope_Rep2 1048.43491987212 1048.43382993586 35.33 2 0.17869638210792843 0.0005180580224985198 0.001560183692461099 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 111401 8057 THSLETQEL True PC9_epitope_Rep2 1056.5087535187201 1056.5076499358602 36.351 2 0.17869212576054397 0.0005180580224985198 0.00156033682177459 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 11838 8141 DHHENKYLL True PC9_epitope_Rep1 1167.56727145435 1167.56563490379 36.145 3 0.17869097838559975 0.0005180580224985198 0.0015603781031096012 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 62007 20579 LLDPSVFHV True PC9_epitope_Rep5 1025.5545815123298 1025.5534899358602 84.204 2 0.17868942029258475 0.0005180580224985198 0.0015604341633972533 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 40230 13069 HQIEAVDGEEL True PC9_epitope_Rep3 1238.5778957076998 1238.57678993586 55.296 2 0.1786857598435905 0.0005180580224985198 0.001560565874526942 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 91045 21301 RFLDDLGLKF True PC9_epitope_Rep1 1222.6710082468996 1222.66990993586 86.762 2 0.1786857057926878 0.0005180580224985198 0.0015605678194825646 ['ENSG00000046604|ENST00000261590|DSG2'] 106260 15112 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.55917496793 63.526 1 0.1786846146443682 0.0005180580224985198 0.0015606070836395155 ['ENSG00000131459|ENST00000253778|GFPT2'] 116596 5436 TVADKIHSV True PC9_epitope_Rep2 968.52909504048 968.52798993586 26.301 2 0.17868048678609455 0.0005180580224985198 0.001560755630488145 ['ENSG00000276023|ENST00000617516|DUSP14'] 140645 20913 YRSEGWWTL True PC9_epitope_Rep5 1196.5614577979197 1196.56036993586 85.497 2 0.17867146733755743 0.0005180580224985198 0.0015610802574529416 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 33207 6363 GKAKTIIQL True NCI_RA007_Epitope_Rep3 970.6175161220599 970.61640993586 32.03 2 0.17866495834041596 0.0005180580224985198 0.0015613145705529665 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 105547 4264 SSDAHTSYY True H1975_Epitope_Rep3 1029.40395409701 1029.40284993586 21.519 2 0.1786584076075701 0.0005180580224985198 0.0015615504216380288 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 115362 18481 TRIWQDVQL True PC9_epitope_Rep4 1157.6193070272097 1157.61820993586 79.158 2 0.17865832717602675 0.0005180580224985198 0.0015615533176986654 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 138401 6589 YHGNTNPEL True PC9_epitope_Rep3 1043.46722305991 1043.4661299358602 30.37 2 0.17865727744948562 0.0005180580224985198 0.0015615911152003406 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 9164 20212 AVLERLVDI True PC9_epitope_Rep3 1026.6073453611798 1026.6062499358602 83.004 2 0.17864203096646633 0.0005180580224985198 0.0015621401986170033 ['ENSG00000160714|ENST00000292211|UBE2Q1', 'ENST00000497453.1_1_1:154524878-154531400:-|nuORF'] 21297 9012 EREGLGQSL True PC9_epitope_Rep5 987.4985231881899 987.4974299358599 39.61 2 0.1786416222147683 0.0005180580224985198 0.0015621549219705087 ['ENSG00000138771|ENST00000296043|SHROOM3', 'ENST00000486758.5_1_4:77631429-77663226:+|nuORF'] 57657 4972 LEEEPRGPP True H1975_Epitope_Rep3 1022.5032742154598 1022.50216993586 24.252 2 0.17864020970191208 0.0005180580224985198 0.0015622058021592434 ['ENSG00000213015|ENST00000325333|ZNF580'] 131113 12217 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.5222499358601 52.165 2 0.17863953402103516 0.0005180580224985198 0.0015622301414772663 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 107554 11647 SVPEFPLSPPK True NCI_RA007_Epitope_Rep4 1196.6441247927198 1196.64302993586 51.757 2 0.17863690394923717 0.0005180580224985198 0.001562324885312743 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 24085 19261 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5797699358602 78.89 2 0.17862551164876958 0.0005180580224985198 0.0015627353399049328 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 71205 19168 LYPDHFHLL True PC9_epitope_Rep5 1153.59202965021 1153.5903749037902 78.768 3 0.17862293031154391 0.0005180580224985198 0.0015628283582302279 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 52788 5162 KNLQTVNVDEN True NCI_RA007_Epitope_Rep4 1272.6309939097198 1272.62988993586 26.38 2 0.1786225306203694 0.0005180580224985198 0.0015628427615725247 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 24004 11690 EYMKHTRLF True PC9_epitope_Rep3 1223.6121134717898 1223.61046490379 49.985 3 0.1786217686361273 0.0005180580224985198 0.0015628702209406658 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 78181 16449 NYATRIVTL True PC9_epitope_Rep5 1049.58694426977 1049.58584993586 68.269 2 0.17861138973180818 0.0005180580224985198 0.001563244290127742 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 3260 4843 AGFAGDDAPR True NCI_RA007_Epitope_Rep4 975.4410083120698 975.43990993586 25.067 2 0.17860974718440267 0.0005180580224985198 0.001563303497887998 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 31761 6686 GEHSYTGIIHA True H1975_Epitope_Rep3 1183.56218607391 1183.56055490379 30.672 3 0.17860942581986095 0.0005180580224985198 0.0015633150821541344 ['ENSG00000122912|ENST00000609923|SLC25A16'] 10137 14004 AYVHMVTHF True PC9_epitope_Rep3 1103.52223583823 1103.52112993586 58.946 2 0.17860562267864732 0.0005180580224985198 0.0015634521809713448 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 125952 6290 VLDETRTAY True H1975_Epitope_Rep3 1066.5294889632999 1066.52838993586 29.199 2 0.17860225867486068 0.0005180580224985198 0.001563573459432938 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2', 'nc|ENSG00000100325|Q9H1I8-2|ASCC2', 'ENST00000458594.5_1_22:30197094-30223519:-|nuORF'] 77014 13919 NRHYYSITI True PC9_epitope_Rep5 1165.58800689893 1165.58635490379 58.56 3 0.17860060856240667 0.0005180580224985198 0.0015636329524362728 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 36611 22109 GVIAEILRGV True PC9_epitope_Rep5 1025.6233297784897 1025.62222993586 90.076 2 0.17859973805321996 0.0005180580224985198 0.0015636643386084126 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 265 11983 AAGGVGSIVRV True PC9_epitope_Rep4 984.5716285588 984.57052993586 53.886 2 0.1785853849420657 0.0005180580224985198 0.0015641819304207185 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 64529 13554 LPRPQGITV True PC9_epitope_Rep1 979.5814649665099 979.58036993586 56.99 2 0.17858384047478648 0.0005180580224985198 0.0015642376361409294 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 71831 10679 MELERIVSA True H1975_Epitope_Rep2 1046.5430308524599 1046.54192993586 46.1 2 0.17857503350327572 0.0005180580224985198 0.0015645553232490443 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'CUEDC2|p.L11Pfs*19|1|0.27|ENSG00000107874|chr10:102425157-102425158|-/G|frameshift_variant'] 40796 9659 HRYGDSEFTV True PC9_epitope_Rep2 1209.54145062933 1209.5403499358601 42.492 2 0.1785734117363077 0.0005180580224985198 0.001564613831047242 ['ENSG00000169813|ENST00000682386|HNRNPF'] 54389 16250 KYFEKQFEL True PC9_epitope_Rep1 1230.6284747285797 1230.62683490379 67.323 3 0.1785674830944873 0.0005180580224985198 0.001564827734791499 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 54973 7670 KYQEVTNNL True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 36.883 2 0.17856527605206696 0.0005180580224985198 0.0015649073717487326 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 108442 21394 SYLPLAHMF True PC9_epitope_Rep1 1077.53173789277 1077.53064993586 87.125 2 0.17856354139275607 0.0005180580224985198 0.001564969966502971 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 48247 11863 IYQKAFEHL True PC9_epitope_Rep5 1147.6025943339098 1147.60093490379 50.63 3 0.1785633698321906 0.0005180580224985198 0.0015649761573600296 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 76855 16553 NRDELELEL True PC9_epitope_Rep6 1129.5615173675699 1129.5604299358602 76.111 2 0.17855940208888707 0.0005180580224985198 0.001565119342396915 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 138315 17423 YHDINVYSL True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 72.271 2 0.17855457774159092 0.0005180580224985198 0.0015652934576142646 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 78615 21071 NYSPYVNYF True PC9_epitope_Rep5 1165.50802524273 1165.5069299358602 86.11 2 0.17854857932147833 0.0005180580224985198 0.0015655099732804765 ['ENSG00000156162|ENST00000414645|DPY19L4'] 38817 12559 HHALPITDL True PC9_epitope_Rep2 1015.54507945779 1015.5439899358599 53.615 2 0.17853817276223558 0.0005180580224985198 0.001565885673878812 ['ENSG00000065268|ENST00000585809|WDR18'] 9473 7226 AVVIVDDR True PC9_epitope_Rep4 885.4919812557699 885.49088993586 35.1 2 0.1785374424403914 0.0005180580224985198 0.001565912043559572 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 56361 8094 LDDLVSTGK True PC9_epitope_Rep2 946.49712620586 946.49602993586 36.492 2 0.17853414708138607 0.0005180580224985198 0.0015660310343931444 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 126635 16501 VLNEYFHNV True PC9_epitope_Rep5 1133.5505587610498 1133.54946993586 68.469 2 0.17852847770929017 0.0005180580224985198 0.0015662357687348972 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 23992 6116 EYMKHTRLF True NCI_RA007_Epitope_Rep3 1223.6121134717898 1223.61046490379 31.048 3 0.17851579028678244 0.0005180580224985198 0.0015666940385014212 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 48697 16743 KAYTSQFVSL True PC9_epitope_Rep1 1142.5971746003 1142.5960699358602 69.23 2 0.1785154045948555 0.0005180580224985198 0.0015667079717991892 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT1|p.V504L|1|0.07|ENSG00000198380|chr2:69329771-69329771|C/A|missense_variant'] 55448 12276 LAFNGDLAKA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 58.604 2 0.17851512744279394 0.0005180580224985198 0.0015667179841211774 ['ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF', 'TNKS1BP1|p.P738Hfs*87|1|0.22|ENSG00000149115|chr11:57310498-57310498|G/-|frameshift_variant'] 96156 9847 RYPDRITLI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65458993586 44.521 2 0.17851140931111328 0.0005180580224985198 0.001566852310559416 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 32169 14145 GEVLMVQV True NCI_RA007_Epitope_Rep5 873.4629896266098 873.4624449679301 61.097 1 0.17850757013307694 0.0005180580224985198 0.0015669910221936482 ['ENSG00000120948|ENST00000240185|TARDBP'] 17782 18239 EHSLPTLGL True PC9_epitope_Rep5 965.51819600361 965.51708993586 75.17 2 0.17850706195100247 0.0005180580224985198 0.0015670093840160133 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 108270 20501 SYIEHIFEI True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 87.006 2 0.17849741382108528 0.0005180580224985198 0.0015673580347004916 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 129933 13408 VRTPYTMSY True PC9_epitope_Rep5 1116.52738078832 1116.5262899358602 56.59 2 0.17848418401752777 0.0005180580224985198 0.0015678362412488878 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 24791 8747 FATHAAALSVR True PC9_epitope_Rep1 1142.6196413803798 1142.61799490379 38.484 3 0.17848278158679948 0.0005180580224985198 0.0015678869422958795 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 73636 20838 MWSPTHPALF True PC9_epitope_Rep1 1185.5641006502099 1185.56300993586 84.982 2 0.17847430833711556 0.0005180580224985198 0.0015681933044006313 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 97552 5422 SEESARLVAA True H1975_Epitope_Rep2 1031.5247379360299 1031.52364993586 25.883 2 0.17847016152524098 0.0005180580224985198 0.0015683432599936378 ['ENSG00000008869|ENST00000233099|HEATR5B'] 20816 20886 EQIKDIFYI True PC9_epitope_Rep2 1167.6175756917098 1167.61646993586 85.781 2 0.178462441839444 0.0005180580224985198 0.0015686224548902012 ['ENSG00000164902|ENST00000297540|PHAX'] 133946 8350 VYIKHPVSL True PC9_epitope_Rep6 1054.61751612206 1054.61640993586 41.77 2 0.17845560343127176 0.0005180580224985198 0.0015688698185432168 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 90008 8801 RDQIVTVSV True H1975_Epitope_Rep1 1015.56620882519 1015.56510993586 38.779 2 0.17845159509133635 0.0005180580224985198 0.0015690148291643868 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 40334 12035 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5439899358599 54.097 2 0.17844184072594524 0.0005180580224985198 0.0015693677711412272 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 53787 11501 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep2 1213.59004099497 1213.58894993586 49.296 2 0.1784413034322475 0.0005180580224985198 0.001569387214337338 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 11682 15746 DGTGVVEFVR True PC9_epitope_Rep1 1077.5454733806098 1077.54436993586 65.392 2 0.17843594347792144 0.0005180580224985198 0.0015695811897018343 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 22366 10705 ETEDVNLAY True H1975_Epitope_Rep2 1052.4662200004 1052.4651299358602 46.201 2 0.17843333823322816 0.0005180580224985198 0.0015696754815083334 ['ENSG00000153767|ENST00000283875|GTF2E1'] 118435 17428 TYPENWRAF True PC9_epitope_Rep2 1182.5458077337798 1182.54470993586 72.289 2 0.17843242276299254 0.0005180580224985198 0.0015697086165348893 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 134599 20614 VYSIVPQSW True PC9_epitope_Rep4 1077.54949613189 1077.54897496793 87.445 1 0.17842899220465436 0.0005180580224985198 0.0015698327902573682 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 17420 10408 EHDPVGQMV True PC9_epitope_Rep1 1010.44913046762 1010.44802993586 44.919 2 0.17841202712793988 0.0005180580224985198 0.0015704470089294622 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 118288 16068 TYLPTSPLL True NCI_RA007_Epitope_Rep5 1003.55899818643 1003.55790993586 68.536 2 0.17840956216347204 0.0005180580224985198 0.0015705362727143379 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 127282 17076 VMAPRALLL True PC9_epitope_Rep6 982.5997578829398 982.59866993586 78.251 2 0.17839782924235062 0.0005180580224985198 0.0015709612267859013 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 90524 8840 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64402993586 38.97 2 0.17839500331189365 0.0005180580224985198 0.0015710635962267766 ['ENSG00000127540|ENST00000591899|UQCR11'] 25768 7957 FETLQAQAGK True PC9_epitope_Rep1 1091.5611234447497 1091.56002993586 35.429 2 0.1783934213079273 0.0005180580224985198 0.0015711209072993958 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 142425 20558 YYFDSYAHF True PC9_epitope_Rep1 1211.4923751785898 1211.4912699358601 83.889 2 0.17839085487791911 0.0005180580224985198 0.001571213885513358 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.T357Pfs*4|1|0.34|ENSG00000111218|chr12:3592317-3592317|G/-|frameshift_variant', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF'] 27877 14834 FQDPYTRSL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 62.195 2 0.17839037565292104 0.0005180580224985198 0.0015712312477837041 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 40329 13528 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 57.087 2 0.1783831441488932 0.0005180580224985198 0.0015714932677312634 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 38480 6866 HEQFKATLP True H1975_Epitope_Rep2 1069.55564414149 1069.5545499358602 31.329 2 0.17837944627802646 0.0005180580224985198 0.0015716272700394003 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 28500 10595 FSDYLHPQY True H1975_Epitope_Rep1 1168.5189242796 1168.5178299358602 45.707 2 0.1783788090977227 0.0005180580224985198 0.0015716503611394174 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 107525 17378 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 71.651 2 0.17836872301855958 0.0005180580224985198 0.0015720159209425624 ['ENSG00000073756|ENST00000367468|PTGS2'] 53231 20006 KQFEPNDFYL True PC9_epitope_Rep3 1299.6135529404298 1299.61244993586 82.199 2 0.17836815852955568 0.0005180580224985198 0.0015720363827957634 ['ENSG00000101126|ENST00000621696|ADNP'] 78469 17691 NYM[Oxidation]PGQLTI True PC9_epitope_Rep4 1051.50083206775 1051.4997299358602 76.073 2 0.17836789244824086 0.0005180580224985198 0.0015720460279243455 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 134454 13012 VYPPPHQVF True PC9_epitope_Rep3 1082.5549158654999 1082.55380993586 55.079 2 0.178367092011046 0.0005180580224985198 0.0015720750431701602 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 114732 20993 TQINVGNLEL True PC9_epitope_Rep5 1099.5873381925899 1099.58624993586 85.811 2 0.17836630143199336 0.0005180580224985198 0.001572103701592292 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'DDX17|p.S385C|1|0.27|ENSG00000100201|chr22:38494691-38494691|T/A|missense_variant'] 75998 20140 NLVRELLAV True PC9_epitope_Rep4 1025.6233297784897 1025.62222993586 85.604 2 0.17836162206695091 0.0005180580224985198 0.0015722733388850575 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'PSAT1|p.D68Y|1|0.4|ENSG00000135069|chr9:78304745-78304745|G/T|missense_variant'] 91137 19410 RFVNVVPTFG True PC9_epitope_Rep2 1134.6185787512197 1134.61748993586 80.038 2 0.17835703126211047 0.0005180580224985198 0.0015724397834932329 ['ENSG00000149806|ENST00000529639|FAU'] 27920 7461 FQEENTEKL True PC9_epitope_Rep2 1136.5349682665599 1136.5338699358601 34.073 2 0.1783389674585579 0.0005180580224985198 0.0015730948776514577 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 31824 9081 GEIQEKLLSA True NCI_RA007_Epitope_Rep3 1086.5920892198599 1086.59098993586 42.807 2 0.17833396084505443 0.0005180580224985198 0.0015732764937306854 ['ENSG00000261150|ENST00000615648|EPPK1'] 141313 12611 YTDSSSILNY True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 53.605 2 0.17832809817248654 0.0005180580224985198 0.0015734891902498384 ['ENSG00000111647|ENST00000279907|BLTP3B'] 118960 10377 VADTVARVL True PC9_epitope_Rep6 942.5498304850598 942.54872993586 50.639 2 0.17831903092699455 0.0005180580224985198 0.0015738182047188396 ['ENSG00000145632|ENST00000274289|PLK2'] 60907 11444 LHYPSTTAL True PC9_epitope_Rep6 1001.51819600361 1001.51708993586 55.08 2 0.17831307890713505 0.0005180580224985198 0.0015740342174368738 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 128420 8916 VPRQPTVTSV True PC9_epitope_Rep1 1082.60840799034 1082.60730993586 39.137 2 0.17831238581120046 0.0005180580224985198 0.0015740593734393563 ['ENSG00000163110|ENST00000317968|PDLIM5'] 108215 19722 SYIALPLTL True NCI_RA007_Epitope_Rep1 989.57973363101 989.57918496793 80.902 1 0.17830496555136802 0.0005180580224985198 0.0015743287179213119 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 75400 6547 NIVEAAAVR True H1975_Epitope_Rep3 941.5294293936498 941.52832993586 30.15 2 0.17830074234424528 0.0005180580224985198 0.0015744820347216258 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF', 'ENST00000475510.1_1_3:124452395-124452491:-|nuORF'] 142689 7397 YYPTEDVPR True H1975_Epitope_Rep3 1138.5294889632999 1138.52838993586 33.432 2 0.17829814471729552 0.0005180580224985198 0.0015745763448543166 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 133807 12722 VYFSKSEQL True PC9_epitope_Rep3 1099.5549754351498 1099.5538699358601 53.957 2 0.17829812414027132 0.0005180580224985198 0.0015745770919518018 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant'] 77834 5764 NVDPVQHTY True H1975_Epitope_Rep3 1071.4985231881901 1071.4979749679298 27.197 1 0.17829678314909458 0.0005180580224985198 0.0015746257805706316 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 115598 19683 TRTNMLLEL True PC9_epitope_Rep5 1089.58523001761 1089.5841299358601 80.764 2 0.178293044837383 0.0005180580224985198 0.0015747615189065343 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 32401 9762 GFQNALIVR True H1975_Epitope_Rep1 1016.5767139392399 1016.57560993586 42.479 2 0.1782894501489518 0.0005180580224985198 0.0015748920533256877 ['CON__P02769'] 87721 8404 QRAITGASL True PC9_epitope_Rep5 915.5137793295099 915.51268993586 37.267 2 0.17828141927810623 0.0005180580224985198 0.0015751837186070605 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 54000 17189 KVFDPVPVGV True PC9_epitope_Rep4 1055.60153170475 1055.6004299358601 74.122 2 0.17828005074842634 0.0005180580224985198 0.0015752334262826738 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 28744 14656 FSSPHLVQV True PC9_epitope_Rep2 1012.5341804209198 1012.53308993586 61.64 2 0.1782766104165939 0.0005180580224985198 0.001575358392805874 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 112548 13127 TLEEDEEELFK True NCI_RA007_Epitope_Rep2 1380.6296564970396 1380.62854993586 55.692 2 0.17827463781611663 0.0005180580224985198 0.0015754300499730013 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 25617 5331 FENERAVTP True H1975_Epitope_Rep2 1061.51417325233 1061.5130699358601 25.558 2 0.17826832394589184 0.0005180580224985198 0.0015756594311158692 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 11470 11662 DFEQPLAISR True NCI_RA007_Epitope_Rep1 1174.59823722946 1174.5971499358602 49.336 2 0.1782628897919087 0.0005180580224985198 0.0015758568791991157 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'PDLIM1-SORBS1|11|fusion', 'PDLIM1-SORBS1|9|fusion', 'PDLIM1-SORBS1|7|fusion', 'PDLIM1-SORBS1|10|fusion', 'PDLIM1-SORBS1|8|fusion', 'PDLIM1-SORBS1|6|fusion', 'ENSG00000107438|ENST00000329399|PDLIM1', 'ENST00000477757.5_1_10:97028616-97050708:-|nuORF'] 136326 14359 WTAELGIRHV True PC9_epitope_Rep1 1180.63529144452 1180.6336349037902 60.056 3 0.17826132405844117 0.0005180580224985198 0.0015759137741757046 ['ENSG00000108106|ENST00000264552|UBE2S'] 91686 4338 RKAALEQDL True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 23.811 2 0.1782504682566459 0.0005180580224985198 0.0015763083044126854 ['ENSG00000100292|ENST00000216117|HMOX1'] 128388 17019 VPRPAVLDPAL True PC9_epitope_Rep2 1146.67609362734 1146.6749899358601 70.713 2 0.17824483322109927 0.0005180580224985198 0.0015765131363886665 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 133927 17709 VYIKDLSSF True PC9_epitope_Rep4 1070.56481184286 1070.56370993586 76.142 2 0.17824267911364483 0.0005180580224985198 0.0015765914446395134 ['ENSG00000084731|ENST00000264712|KIF3C'] 101486 22733 SLLDIIEKV True PC9_epitope_Rep1 1028.61176203528 1028.6106699358602 92.247 2 0.17823478009754062 0.0005180580224985198 0.0015768786308476615 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 11065 3888 DAVTYTEHAK True NCI_RA007_Epitope_Rep2 1133.53530261973 1133.5342099358602 19.759 2 0.17823184036601109 0.0005180580224985198 0.0015769855246708022 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 104973 13725 SRDKTIIM[Oxidation]W True PC9_epitope_Rep1 1164.59612943492 1164.59502993586 57.641 2 0.1782287867699094 0.0005180580224985198 0.0015770965664958349 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 8027 3943 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 20.227 2 0.17822802452646694 0.0005180580224985198 0.0015771242861516222 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 89425 14595 QYDPYTDSRF True PC9_epitope_Rep1 1290.55168095986 1290.5505899358602 60.963 2 0.1782218169137878 0.0005180580224985198 0.0015773500496386536 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 41516 20777 HYNSDLNNLLF True PC9_epitope_Rep3 1348.6411646706 1348.64006993586 85.19 2 0.17822164204828053 0.0005180580224985198 0.0015773564097578505 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 130127 9372 VSDRVTVLY True H1975_Epitope_Rep1 1050.57095985246 1050.5698699358602 40.959 2 0.17820923024542196 0.0005180580224985198 0.0015778079111562259 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 92469 13727 RLTEEFQNV True PC9_epitope_Rep3 1134.56693710118 1134.5658499358601 57.884 2 0.1781984685004453 0.0005180580224985198 0.0015781994935437852 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000486040.1_1_7:2274759-2277695:-|nuORF'] 141235 8156 YTDATPLRV True H1975_Epitope_Rep1 1034.53965972418 1034.53856993586 36.313 2 0.17819537796933238 0.0005180580224985198 0.0015783119651886716 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 77830 5603 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.49742993586 26.554 2 0.17819130725880167 0.0005180580224985198 0.0015784601201035966 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 107492 9162 SVNFSEFSK True NCI_RA007_Epitope_Rep4 1043.4923751785898 1043.4912699358601 42.081 2 0.1781808926777222 0.0005180580224985198 0.0015788392257890835 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000559968.1_1_14:68082236-68082464:+|nuORF'] 95403 13565 RWFDKSFTF True NCI_RA007_Epitope_Rep5 1232.59784330664 1232.59674993586 58.865 2 0.17817698293254575 0.0005180580224985198 0.001578981569664338 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 39709 4647 HLTGEFEK True NCI_RA007_Epitope_Rep2 959.47124581119 959.47014993586 22.702 2 0.17817645813693445 0.0005180580224985198 0.0015790006771159166 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 24179 15415 EYQKVWNLF True NCI_RA007_Epitope_Rep4 1225.6131590176099 1225.61206993586 66.964 2 0.17817130156491698 0.0005180580224985198 0.0015791884367174457 ['ENSG00000059378|ENST00000263549|PARP12'] 140382 19208 YRDWFSSQL True PC9_epitope_Rep4 1200.55637241748 1200.55526993586 81.983 2 0.17817044117273131 0.0005180580224985198 0.0015792197672445513 ['ENST00000522359.2_1_11:61630757-61632750:+|nuORF', 'nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2'] 138399 5639 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 27.074 2 0.1781704292515921 0.0005180580224985198 0.0015792202013481423 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 73057 15192 MRDPIRILV True PC9_epitope_Rep6 1111.65358436095 1111.65248993586 70.518 2 0.1781693528998299 0.0005180580224985198 0.0015792593967664122 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 114709 15220 TQIDHYVGI True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 63.552 2 0.17816752338710426 0.0005180580224985198 0.001579326020825051 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 96152 10185 RYPDRITLI True NCI_RA007_Epitope_Rep4 1145.65569253593 1145.65458993586 46.033 2 0.17816175096196715 0.0005180580224985198 0.001579536249564763 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 64056 20865 LPAQPLPLSV True PC9_epitope_Rep2 1033.6171817688898 1033.6160899358601 85.703 2 0.178159094012774 0.0005180580224985198 0.0015796330237008798 ['ENSG00000074181|ENST00000263388|NOTCH3'] 55427 18888 LAFEEEFGRV True PC9_epitope_Rep4 1195.5873381925899 1195.58624993586 80.738 2 0.17815054027088045 0.0005180580224985198 0.0015799446172232463 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF', 'EIF3I|p.K282N|1|0.28|ENSG00000084623|chr1:32230969-32230969|G/C|missense_variant'] 77831 5696 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.49742993586 26.908 2 0.17813120140459449 0.0005180580224985198 0.001580649315457165 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 49215 6752 KENEGFTVTA True H1975_Epitope_Rep3 1094.52440358286 1094.5233099358602 30.924 2 0.1781235971604103 0.0005180580224985198 0.0015809264963899544 ['ENSG00000125730|ENST00000245907|C3'] 133881 14546 VYGSFASKL True PC9_epitope_Rep5 970.5123823471799 970.51128993586 60.952 2 0.178123246325213 0.0005180580224985198 0.0015809392857952837 ['ENSG00000155096|ENST00000337198|AZIN1'] 7203 12897 AQYLINVRL True NCI_RA007_Epitope_Rep3 1088.63422881536 1088.63312993586 57.995 2 0.17812149517944903 0.0005180580224985198 0.0015810031239072786 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 62383 19619 LLGPRLVLA True PC9_epitope_Rep5 950.6276868829399 950.62658993586 80.517 2 0.17812029107417537 0.0005180580224985198 0.001581047021127185 ['ENSG00000170348|ENST00000303575|TMED10'] 91050 20098 RFLDDLGLKF True PC9_epitope_Rep4 1222.6710082468996 1222.66936490379 85.439 3 0.178118741723581 0.0005180580224985198 0.001581103506509222 ['ENSG00000046604|ENST00000261590|DSG2'] 104977 11516 SRDKTIIM[Oxidation]W True PC9_epitope_Rep4 1164.59612943492 1164.59502993586 52.059 2 0.17811351917897125 0.0005180580224985198 0.0015812939220932224 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 114609 7837 TQDPTVTRL True PC9_epitope_Rep4 1029.5454733806098 1029.54436993586 37.556 2 0.1781134055068665 0.0005180580224985198 0.0015812980668685548 ['ENSG00000130827|ENST00000369682|PLXNA3'] 93680 10240 RQSGEAFVEL True NCI_RA007_Epitope_Rep4 1134.5669371011797 1134.5658499358601 46.244 2 0.1781080234151141 0.0005180580224985198 0.0015814943241386965 ['ENSG00000169813|ENST00000682386|HNRNPF'] 76458 15588 NQFPGFKEV True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 64.968 2 0.17810783942046557 0.0005180580224985198 0.0015815010339107075 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 125062 11714 VIDSAELQAY True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 50.133 2 0.17810268857298298 0.0005180580224985198 0.0015816888825348333 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 40840 8293 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48724993586 36.884 2 0.1780986590622733 0.0005180580224985198 0.0015818358521931491 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 106895 11518 SVDGVIKEV True PC9_epitope_Rep4 944.51786165044 944.51676993586 52.066 2 0.1780930820994458 0.0005180580224985198 0.0015820392851443206 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 22436 7144 ETERIVTTY True H1975_Epitope_Rep2 1110.5557037111398 1110.55460993586 32.414 2 0.1780920116291368 0.0005180580224985198 0.0015820783360862946 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 105331 18707 SRPPLLGF True PC9_epitope_Rep5 885.50723739709 885.50614993586 76.975 2 0.17809106761657184 0.0005180580224985198 0.0015821127746290524 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 142875 18160 YYTPITPHL True PC9_epitope_Rep1 1103.56514619603 1103.56404993586 74.643 2 0.17808248108182917 0.0005180580224985198 0.0015824260546665957 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 140869 13214 YSDVMLENY True H1975_Epitope_Rep2 1132.47467650912 1132.47417496793 55.955 1 0.17807920175615968 0.0005180580224985198 0.0015825457173808282 ['ENSG00000130818|ENST00000253115|ZNF426', 'ENSG00000198028|ENST00000301480|ZNF560'] 32450 14119 GFVTFDDHD True PC9_epitope_Rep4 1051.42468954159 1051.42358993586 62.214 2 0.1780746313789209 0.0005180580224985198 0.0015827125057329074 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 9801 9226 AYLDKSPQF True NCI_RA007_Epitope_Rep5 1067.52876068731 1067.52766993586 42.138 2 0.1780720371311336 0.0005180580224985198 0.0015828071863450402 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF', 'ENST00000513447.1_1_5:54569247-54572159:-|nuORF'] 11063 3779 DAVTYTEHAK True NCI_RA007_Epitope_Rep2 1133.53530261973 1133.53366490379 19.339 3 0.17806539571991598 0.0005180580224985198 0.0015830495995611171 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 11768 11693 DHDIPQQL True PC9_epitope_Rep5 964.46140940348 964.46030993586 49.973 2 0.17806477224766798 0.0005180580224985198 0.0015830723583676485 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 138543 15150 YHYDMNTASL True PC9_epitope_Rep5 1213.5073736197298 1213.50626993586 63.282 2 0.17806010790049043 0.0005180580224985198 0.001583242632919389 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1'] 41541 19180 HYQDVSCLQF True PC9_epitope_Rep5 1238.53900810118 1238.5379099358602 78.813 2 0.17805352289849494 0.0005180580224985198 0.0015834830532594104 ['ENSG00000065268|ENST00000585809|WDR18'] 86108 15133 QHVPGSPFSV True PC9_epitope_Rep1 1053.52434401321 1053.5232499358601 63.029 2 0.17805251695763719 0.0005180580224985198 0.0015835197836726509 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 128840 19023 VQDEFLEKL True PC9_epitope_Rep5 1119.5811901829898 1119.58008993586 78.199 2 0.17804169568866055 0.0005180580224985198 0.0015839149599597814 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 74893 10761 NHHMQSISF True PC9_epitope_Rep3 1099.4869129586702 1099.48580993586 46.347 2 0.1780414191272121 0.0005180580224985198 0.0015839250608577224 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 132261 12284 VTVSDLQHV True PC9_epitope_Rep4 996.5240096600402 996.52290993586 55.067 2 0.17804030647280752 0.0005180580224985198 0.001583965699164156 ['ENSG00000068489|ENST00000262293|PRR11'] 115883 4846 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 23.728 3 0.17803929133033813 0.0005180580224985198 0.001584002776880538 ['ENSG00000204560|ENST00000376442|DHX16'] 22211 8435 ESYDDVSSFR True H1975_Epitope_Rep1 1203.5043964142699 1203.50328993586 37.371 2 0.1780388915929852 0.0005180580224985198 0.001584017377383242 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000463906.1_1_1:43630116-43636618:-|nuORF'] 71923 7553 MEQLLSQGHQP True H1975_Epitope_Rep3 1266.6026709869 1266.6015699358602 34.034 2 0.17803218415823435 0.0005180580224985198 0.0015842623881550026 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 48035 19460 IYLPYLHEW True PC9_epitope_Rep6 1232.62299542532 1232.62188993586 87.515 2 0.17803215001139644 0.0005180580224985198 0.0015842636355759294 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 35991 6051 GTVVTGTLER True H1975_Epitope_Rep3 1031.56112344475 1031.56002993586 28.288 2 0.17802673754220363 0.0005180580224985198 0.0015844613713672082 ['ENSG00000178952|ENST00000313511|TUFM'] 53963 6232 KTYGEIFEK True NCI_RA007_Epitope_Rep3 1113.57062549929 1113.5695299358601 31.518 2 0.17802035253983825 0.0005180580224985198 0.0015846946688639534 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 89000 16789 QVISELDKL True PC9_epitope_Rep2 1043.58627556343 1043.5851699358602 69.826 2 0.17801365135118805 0.0005180580224985198 0.001584939556292837 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5'] 18894 6229 ELEAALQR True H1975_Epitope_Rep3 928.4977949121999 928.49668993586 28.972 2 0.1780132944890134 0.0005180580224985198 0.0015849525984840318 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 11009 4944 DAPQDFHPDR True NCI_RA007_Epitope_Rep1 1196.52104953792 1196.51941490379 23.314 3 0.17801151929558284 0.0005180580224985198 0.0015850174778235058 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 58326 9236 LEMLTGQERVA True H1975_Epitope_Rep3 1245.6387221424502 1245.63762993586 40.517 2 0.17801004261577413 0.0005180580224985198 0.0015850714491861832 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 106912 7514 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4494699358602 33.902 2 0.17800793387065647 0.0005180580224985198 0.0015851485251774235 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 125976 13533 VLDNPSPFY True H1975_Epitope_Rep3 1050.5022115863 1050.5016749679298 57.334 1 0.17800744869685992 0.0005180580224985198 0.0015851662591231492 ['ENST00000511766.2_1_6:119215493-119222091:+|nuORF', 'ENSG00000111875|ENST00000229595|ASF1A'] 108411 14924 SYLNSVQRL True PC9_epitope_Rep1 1078.5771078620598 1078.5760099358602 62.227 2 0.1779882255960688 0.0005180580224985198 0.001585869056815163 ['nc|ENSG00000136243|O15504-2|NUP42', 'ENSG00000136243|ENST00000258742|NUP42'] 27161 18840 FLLDPVKGERL True PC9_epitope_Rep3 1285.73942215989 1285.73776490379 77.69 3 0.17798441376007 0.0005180580224985198 0.0015860084548378734 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 134471 20500 VYPQYVIEY True PC9_epitope_Rep2 1172.57537652656 1172.5748749679299 84.283 1 0.17798032993141333 0.0005180580224985198 0.001586157813191406 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 32197 10254 GEWPDQPRI True NCI_RA007_Epitope_Rep4 1096.53015766964 1096.5290699358602 46.297 2 0.17797575549316813 0.0005180580224985198 0.0015863251313967392 ['PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'PTPN12-RSBN1L|8|fusion', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L', 'ENSG00000187257|ENST00000334955|RSBN1L'] 26250 17993 FHEGDVITL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 74.414 2 0.17797309569274952 0.0005180580224985198 0.0015864224264499922 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 86984 2601 QLYWSHPRK True NCI_RA007_Epitope_Rep3 1213.6356257976897 1213.63399490379 14.706 3 0.17797099383657108 0.0005180580224985198 0.0015864993162243914 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 35756 3762 GTIEKSKLITK True NCI_RA007_Epitope_Rep4 1216.7390878067197 1216.73743490379 20.633 3 0.17796914309270967 0.0005180580224985198 0.0015865670229376215 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 7920 6830 ATANQIILK True NCI_RA007_Epitope_Rep4 970.58113061334 970.58058496793 32.893 1 0.17796621639477642 0.0005180580224985198 0.0015866740977384544 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 131182 10497 VTELHVISY True H1975_Epitope_Rep2 1059.5600608155898 1059.5589699358602 45.395 2 0.177965665792685 0.0005180580224985198 0.001586694242617797 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 134834 20165 VYVDDIYVI True PC9_epitope_Rep6 1097.56447748969 1097.5633899358602 90.238 2 0.1779621625307137 0.0005180580224985198 0.0015868224224680372 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 46634 16730 ITDIQIPLDY True H1975_Epitope_Rep3 1189.6230549949698 1189.6219499358601 69.878 2 0.17796168446152913 0.0005180580224985198 0.0015868399152089243 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 128810 11240 VQANSGAIVKL True PC9_epitope_Rep4 1098.6397081186199 1098.6386099358601 51.009 2 0.177960166264978 0.0005180580224985198 0.0015868954679029213 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 13271 13797 DLTDYLMK True H1975_Epitope_Rep3 997.47903361357 997.47792993586 58.374 2 0.17795478915027851 0.0005180580224985198 0.001587092238863906 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 105539 8097 SSATTSPFFK True NCI_RA007_Epitope_Rep3 1071.52367530687 1071.52256993586 38.948 2 0.17795065766009485 0.0005180580224985198 0.0015872434438523062 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 40518 5987 HRDYETATL True PC9_epitope_Rep2 1104.51998690876 1104.5188899358602 28.416 2 0.1779375431625444 0.0005180580224985198 0.0015877235060894395 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 40285 12126 HQLSQLQAL True PC9_epitope_Rep4 1036.5665431783598 1036.5654499358602 54.453 2 0.17793732230554224 0.0005180580224985198 0.0015877315919070273 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 2861 5707 AEVETRIEA True H1975_Epitope_Rep3 1016.5138388991599 1016.51274993586 26.981 2 0.17793607891493035 0.0005180580224985198 0.001587777114573652 ['ENSG00000112685|ENST00000230449|EXOC2'] 53869 19606 KTIQDLVSL True PC9_epitope_Rep1 1015.5913609438699 1015.59026993586 80.242 2 0.1779353893104525 0.0005180580224985198 0.0015878023627420132 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant'] 65393 11599 LREGDPVSL True PC9_epitope_Rep2 984.52400966004 984.52290993586 49.942 2 0.17792456561437153 0.0005180580224985198 0.0015881986983906434 ['ENSG00000141499|ENST00000396463|WRAP53'] 99030 18226 SHEEALSFVSL True PC9_epitope_Rep6 1217.5928174958499 1217.59172993586 82.748 2 0.1779033691848332 0.0005180580224985198 0.0015889751436651532 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 29841 17057 FVSISDLLVPK True NCI_RA007_Epitope_Rep2 1216.7067250492798 1216.70562993586 71.085 2 0.17789849889684262 0.0005180580224985198 0.0015891536006325763 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 85817 14894 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 62.11 2 0.17789713533865936 0.0005180580224985198 0.0015892035676934083 ['ENSG00000085872|ENST00000546361|CHERP'] 78510 15429 NYPETLGRLLI True NCI_RA007_Epitope_Rep4 1287.7186867153098 1287.7175899358601 67.016 2 0.17789637049540694 0.0005180580224985198 0.0015892315957666847 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 24459 12523 FADQEVRSL True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 53.04 2 0.17789243136642813 0.0005180580224985198 0.0015893759550101266 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 77332 11039 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.49727496793 47.424 1 0.17788783690876703 0.0005180580224985198 0.0015895443470073194 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 140499 15088 YRLLPGPSA True PC9_epitope_Rep3 972.5392658013599 972.53816993586 63.172 2 0.1778829648530361 0.0005180580224985198 0.00158972293280513 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 35407 8008 GSDFYSM[Oxidation]HY True H1975_Epitope_Rep2 1121.41241098617 1121.4113099358601 35.75 2 0.1778778613406851 0.0005180580224985198 0.0015899100242248538 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 132878 21478 VVLPLELKL True PC9_epitope_Rep5 1022.6739683690199 1022.6728699358599 87.649 2 0.17787540508457733 0.0005180580224985198 0.0015900000768259933 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 40043 9550 HPTEDLVVSA True PC9_epitope_Rep4 1066.5294889632999 1066.52838993586 44.348 2 0.17787298029999005 0.0005180580224985198 0.0015900889806120993 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 130430 7777 VSMDYAISK True NCI_RA007_Epitope_Rep4 1012.4899326504399 1012.4888299358599 36.596 2 0.17787272230615644 0.0005180580224985198 0.0015900984401489668 ['ENSG00000196453|ENST00000247930|ZNF777'] 142454 13063 YYFPVKNVI True NCI_RA007_Epitope_Rep3 1141.6171817688898 1141.6160899358601 58.663 2 0.17786944714548314 0.0005180580224985198 0.0015902185312643327 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 131062 6385 VTDSIRDEY True H1975_Epitope_Rep2 1096.5036681382799 1096.50256993586 29.485 2 0.17785090273901522 0.0005180580224985198 0.001590898674900176 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 75099 12828 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 54.218 2 0.1778492173126472 0.0005180580224985198 0.0015909605048563102 ['ENSG00000171223|ENST00000302754|JUNB'] 78585 22116 NYSGAAEYLYF True PC9_epitope_Rep1 1296.56626839484 1296.56516993586 89.881 2 0.17784749370859979 0.0005180580224985198 0.001591023737851906 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 24014 5755 EYM[Oxidation]KHTRLF True PC9_epitope_Rep2 1239.60702847179 1239.6053849037899 27.529 3 0.17784161672391802 0.0005180580224985198 0.0015912393627607571 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 140928 11456 YSELGHPFGY True H1975_Epitope_Rep3 1168.5189242795998 1168.5178299358602 49.185 2 0.17784146186339767 0.0005180580224985198 0.001591245044945309 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 54829 15884 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 70.137 2 0.1778335585310865 0.0005180580224985198 0.0015915350631620316 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 6014 16771 APIWLEHAA True PC9_epitope_Rep3 1006.5236157372199 1006.52250993586 69.656 2 0.17782552583458197 0.0005180580224985198 0.0015918298827368941 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 118675 14665 TYTDRVFFL True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 65.062 2 0.17782361787601883 0.0005180580224985198 0.0015918999175137559 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 11807 7316 DHFASVHSV True PC9_epitope_Rep5 997.46174375665 997.46064993586 33.102 2 0.17782087201630012 0.0005180580224985198 0.0015920007142561827 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 17682 14984 EHLQVITTL True PC9_epitope_Rep6 1052.5866099166 1052.58550993586 69.649 2 0.17781746787916125 0.0005180580224985198 0.0015921256843344392 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 78446 12245 NYLVLPNRI True NCI_RA007_Epitope_Rep3 1100.63422881536 1100.63312993586 55.313 2 0.1778141555723878 0.0005180580224985198 0.0015922472926382482 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 23996 7267 EYMKHTRLF True NCI_RA007_Epitope_Rep4 1223.6121134717898 1223.61100993586 34.588 2 0.1778138121064068 0.0005180580224985198 0.0015922599032089353 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 98975 8513 SHDDGNIDL True PC9_epitope_Rep2 984.41485313388 984.41374993586 38.108 2 0.17781047350735044 0.0005180580224985198 0.0015923824871966945 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 40308 18309 HQPTTWVSF True PC9_epitope_Rep5 1101.52434401321 1101.5232499358601 75.44 2 0.17780080416120586 0.0005180580224985198 0.0015927375717860828 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 134826 22302 VYVDDIYVI True PC9_epitope_Rep1 1097.56447748969 1097.5633899358602 90.596 2 0.1777992314803442 0.0005180580224985198 0.001592795332386447 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 8064 11627 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.48637496793 49.793 1 0.17779723323457325 0.0005180580224985198 0.0015928687259387307 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 40600 12869 HRIEEVPEL True PC9_epitope_Rep5 1120.58767254576 1120.58656993586 54.509 2 0.17779558727397027 0.0005180580224985198 0.0015929291829561618 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 86631 15664 QLEWDDSTLSY True H1975_Epitope_Rep3 1355.58812603823 1355.58702993586 65.669 2 0.1777789344442332 0.0005180580224985198 0.0015935409796111533 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 76398 12876 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52838993586 54.827 2 0.17776886501688835 0.0005180580224985198 0.0015939110274260477 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 70104 16420 LVPEFVHNV True PC9_epitope_Rep2 1052.5654805492 1052.5643899358602 68.404 2 0.17775323096738502 0.0005180580224985198 0.0015944857436573712 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant'] 3258 4568 AGFAGDDAPR True NCI_RA007_Epitope_Rep3 975.4410083120698 975.43990993586 24.85 2 0.1777393187614154 0.0005180580224985198 0.0015949973384997331 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 129284 19979 VQVPVPVTV True PC9_epitope_Rep2 936.5644179200399 936.56386496793 82.251 1 0.1777358087276898 0.0005180580224985198 0.0015951264392664649 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 84423 8350 QADTTRLEL True NCI_RA007_Epitope_Rep4 1045.54038800017 1045.53928993586 38.933 2 0.17773194734870562 0.0005180580224985198 0.0015952684747746883 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 140245 20726 YQYPVIIHL True PC9_epitope_Rep5 1144.6280808057597 1144.6269899358601 84.78 2 0.17772599902271308 0.0005180580224985198 0.0015954873005419783 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 12479 10238 DKDDTQQIL True PC9_epitope_Rep5 1074.51931820242 1074.51822993586 44.367 2 0.1777253577817773 0.0005180580224985198 0.001595510892173964 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 49883 18597 KIFSGVFVKV True PC9_epitope_Rep5 1122.68011637862 1122.6790099358602 76.558 2 0.17772072926800692 0.0005180580224985198 0.0015956811882866782 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 129697 10389 VRPPVQVY True PC9_epitope_Rep4 956.5443511817998 956.54324993586 47.662 2 0.17771747797456552 0.0005180580224985198 0.0015958008234538217 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 9918 20667 AYLPKILQI True PC9_epitope_Rep2 1057.65356727761 1057.6524699358602 84.932 2 0.17771385008509746 0.0005180580224985198 0.0015959343265198028 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 88812 20429 QTVAWFPLYY True H1975_Epitope_Rep3 1286.6335601090198 1286.6324699358602 85.413 2 0.1776990207455165 0.0005180580224985198 0.0015964801491913237 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 52543 15033 KLFNGTFLKA True PC9_epitope_Rep2 1137.65462990677 1137.65299490379 63.081 3 0.1776989541401212 0.0005180580224985198 0.001596482601154104 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1'] 84835 5504 QEAIENGIHSA True H1975_Epitope_Rep3 1167.55201531303 1167.55090993586 26.223 2 0.17769566145932042 0.0005180580224985198 0.0015966038202225698 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'ENST00000515125.5_1_5:74018372-74021901:-|nuORF'] 70389 5355 LVTEDVM[Oxidation]R True NCI_RA007_Epitope_Rep2 977.4851820036099 977.48408993586 25.449 2 0.17769313185601762 0.0005180580224985198 0.0015966969530804627 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI|p.K57N|1|0.06|ENSG00000105220|chr19:34366393-34366393|G/C|missense_variant'] 48420 20566 IYVPDIRNVF True PC9_epitope_Rep4 1234.6710082469 1234.66990993586 87.258 2 0.17769103568291428 0.0005180580224985198 0.0015967741323836733 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 142685 15034 YYPSTPGRYSI True PC9_epitope_Rep5 1302.6244519773 1302.62334993586 62.832 2 0.177686765009917 0.0005180580224985198 0.001596931386477014 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 74897 10514 NHHMQSISF True PC9_epitope_Rep5 1099.4869129586702 1099.48580993586 45.429 2 0.17768581832378288 0.0005180580224985198 0.0015969662473149342 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 118180 9869 TYITSVSRL True NCI_RA007_Epitope_Rep4 1038.57095985246 1038.5698699358602 44.808 2 0.17766630509061762 0.0005180580224985198 0.0015976849738055705 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 66091 5317 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6222899358602 25.503 2 0.17766562697285845 0.0005180580224985198 0.001597709956587377 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 68166 5875 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 27.666 2 0.1776551581129951 0.0005180580224985198 0.0015980956932933961 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 62063 18387 LLDTPAQLWY True H1975_Epitope_Rep2 1218.62847472858 1218.62736993586 76.273 2 0.17765265652073556 0.0005180580224985198 0.001598187881030137 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4', 'nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF'] 106013 10281 SSVPGVRLLQ True NCI_RA007_Epitope_Rep5 1054.61349337078 1054.6123899358602 46.175 2 0.1776520861104483 0.0005180580224985198 0.001598208902321138 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 107578 15071 SVPIDLQKV True PC9_epitope_Rep3 997.58079626017 997.57968993586 63.105 2 0.1776505764843411 0.0005180580224985198 0.0015982645378043443 ['ENSG00000198056|ENST00000338193|PRIM1'] 8038 3890 ATDPDDTHAY True H1975_Epitope_Rep3 1104.43598250128 1104.4348899358602 20.085 2 0.17765051211890676 0.0005180580224985198 0.0015982669099593532 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 36851 19419 GVLKEGFLV True PC9_epitope_Rep5 960.5644179200399 960.56332993586 79.743 2 0.17765047454723018 0.0005180580224985198 0.0015982682946458179 ['ENSG00000100558|ENST00000216446|PLEK2', 'ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 85212 9184 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 40.279 2 0.1776415489410268 0.0005180580224985198 0.0015985972777131379 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 93116 12477 RPNSLVGITSA True PC9_epitope_Rep3 1113.61422164677 1113.6131299358601 53.019 2 0.17763331912148286 0.0005180580224985198 0.0015989006753349883 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 112136 20501 TIYKDFVYI True PC9_epitope_Rep3 1160.6117620352798 1160.6106699358602 84.117 2 0.17762827028351486 0.0005180580224985198 0.0015990868325557004 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 118156 17108 TYIPVPAKI True PC9_epitope_Rep3 1000.5957180483199 1000.59462993586 70.958 2 0.17762474905531955 0.0005180580224985198 0.0015992166776671842 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 1661 7875 AEFVEVTK True PC9_epitope_Rep4 921.4807478657299 921.47964993586 37.718 2 0.17762290240479423 0.0005180580224985198 0.0015992847770329493 ['CON__P02769'] 8471 6753 ATQSFSTFR True NCI_RA007_Epitope_Rep3 1043.50360856863 1043.5025099358602 33.654 2 0.17761870447360087 0.0005180580224985198 0.001599439595935128 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 109827 5427 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 25.901 2 0.17761131384563353 0.0005180580224985198 0.0015997121973633246 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 140896 11332 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep2 1177.4849072200898 1177.4843749679299 48.637 1 0.1776022070640321 0.0005180580224985198 0.001600048162678559 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 102897 15537 SPAPPLLHV True PC9_epitope_Rep5 929.53345214493 929.53234993586 64.773 2 0.17760037412562554 0.0005180580224985198 0.0016001157915680817 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 1876 10864 AEIEELTASA True H1975_Epitope_Rep3 1032.4975201286798 1032.49642993586 46.87 2 0.1775924560095166 0.0005180580224985198 0.0016004079747093008 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 34706 6979 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 34.088 2 0.17758697776786855 0.0005180580224985198 0.001600610156322226 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 78651 15191 NYVEKGFQI True PC9_epitope_Rep2 1096.5553097883198 1096.5542099358602 63.693 2 0.1775792174406883 0.0005180580224985198 0.0016008966050489637 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 9911 19594 AYLPEWKENI True PC9_epitope_Rep1 1261.6342883850098 1261.6331899358602 80.196 2 0.17757540655272155 0.0005180580224985198 0.0016010372911118406 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 88033 14564 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 60.845 2 0.17756994951586924 0.0005180580224985198 0.0016012387694039154 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 78454 17248 NYLVLPNRI True PC9_epitope_Rep6 1100.63422881536 1100.63312993586 78.944 2 0.1775665694198131 0.0005180580224985198 0.001601363578068118 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 115184 7723 TRDPQFQKL True PC9_epitope_Rep5 1131.6036569630699 1131.60254993586 34.648 2 0.1775637001029375 0.0005180580224985198 0.0016014695340661547 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 75844 9416 NLPLPPPPPPR True H1975_Epitope_Rep1 1193.6920780446499 1193.6909899358602 41.132 2 0.1775629004357911 0.0005180580224985198 0.0016014990648304981 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 115257 12661 TREEGTPLTL True PC9_epitope_Rep5 1115.5822528121498 1115.5811499358601 53.705 2 0.17755897755659514 0.0005180580224985198 0.0016016439400318493 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 76452 14224 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 62.622 2 0.17755702247186522 0.0005180580224985198 0.0016017161478429772 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 1703 12538 AEGNEFWSA True H1975_Epitope_Rep2 1009.41412485789 1009.41357496793 53.321 1 0.17755462248048098 0.0005180580224985198 0.0016018047920011843 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953408-64953522:+|nuORF'] 73037 13300 M[Oxidation]RDPIRILV True PC9_epitope_Rep4 1127.64849936095 1127.6474099358602 59.056 2 0.17755070298293496 0.0005180580224985198 0.0016019495699859502 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 40070 9833 HPTWALKEA True PC9_epitope_Rep5 1051.5450794577898 1051.54398993586 42.792 2 0.17754538882258283 0.0005180580224985198 0.0016021458848089257 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 78579 20265 NYRDTFFNL True PC9_epitope_Rep2 1188.55637241748 1188.55526993586 83.369 2 0.17753310969433395 0.0005180580224985198 0.0016025995904780325 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 90981 10034 RFEEAHFTF True NCI_RA007_Epitope_Rep3 1182.5458077337796 1182.54470993586 46.559 2 0.17752622108500585 0.0005180580224985198 0.0016028541763811318 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 118718 19077 TYTSYLDKF True PC9_epitope_Rep3 1136.5389910178399 1136.5378899358602 78.602 2 0.17752238328736875 0.0005180580224985198 0.0016029960294256314 ['ENSG00000069956|ENST00000261845|MAPK6'] 5955 18647 APHEILIQI True PC9_epitope_Rep2 1032.59678067748 1032.59568993586 77.091 2 0.17752161776888137 0.0005180580224985198 0.0016030243260975383 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 133684 12360 VYAQVARLF True NCI_RA007_Epitope_Rep3 1065.5971150306498 1065.5960099358601 55.813 2 0.17751192490854045 0.0005180580224985198 0.00160338265684982 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 117343 7727 TVPAYFNDSQR True H1975_Epitope_Rep1 1296.6098645423199 1296.6087699358602 34.683 2 0.1775050937557018 0.0005180580224985198 0.0016036352426876772 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 9829 18345 AYLEAIHNF True PC9_epitope_Rep5 1076.52909504048 1076.5279899358602 75.58 2 0.17749792825361882 0.0005180580224985198 0.0016039002341091783 ['ENSG00000042753|ENST00000263270|AP2S1'] 87009 14477 QMISRIEYV True PC9_epitope_Rep4 1137.58523001761 1137.5841299358601 63.596 2 0.1774960539072997 0.0005180580224985198 0.0016039695575899421 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 142671 15025 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.62334993586 62.614 2 0.1774854736352327 0.0005180580224985198 0.0016043609296516124 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 90707 4616 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 22.857 2 0.1774806856948389 0.0005180580224985198 0.001604538070528817 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 100849 10541 SLEPVAVELK True NCI_RA007_Epitope_Rep1 1083.6175756917098 1083.61646993586 44.986 2 0.17747655900946657 0.0005180580224985198 0.0016046907624718137 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 61939 11933 LLDISQKNLY True H1975_Epitope_Rep2 1205.66558851329 1205.66448993586 50.978 2 0.1774695664618677 0.0005180580224985198 0.0016049495277242602 ['nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 88166 19340 QRVEDAFYTL True PC9_epitope_Rep3 1240.6088019131596 1240.6077099358602 79.612 2 0.17746514942709896 0.0005180580224985198 0.0016051130054410554 ['nc|ENSG00000133703|P01116|KRAS'] 119164 9301 VAITRVANL True H1975_Epitope_Rep2 955.5814649665099 955.58036993586 40.734 2 0.17746415970696222 0.0005180580224985198 0.0016051496380008374 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'nc|ENSG00000116586|Q9Y2Q5-2|LAMTOR2'] 54722 21199 KYMDINFDF True PC9_epitope_Rep5 1191.52704643515 1191.5259499358601 86.589 2 0.1774636096753446 0.0005180580224985198 0.0016051699967099574 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 92822 14268 RPAQPTLWTA True PC9_epitope_Rep5 1139.60874234351 1139.60764993586 59.885 2 0.1774593566415686 0.0005180580224985198 0.0016053274259872877 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 109601 5812 TEADSGYTP True H1975_Epitope_Rep2 939.3821560232699 939.38160496793 27.347 1 0.17744960465227774 0.0005180580224985198 0.0016056884616657348 ['nc|ENSG00000064490|O14593-2|RFXANK', 'nc|ENSG00000064490|O14593-3|RFXANK', 'ENSG00000064490|ENST00000303088|RFXANK'] 97800 9184 SELEGTPEV True H1975_Epitope_Rep3 959.4447562798299 959.4442049679301 40.316 1 0.17744700823146187 0.0005180580224985198 0.0016057845994072474 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40'] 88184 19336 QRVWAEYAL True PC9_epitope_Rep3 1134.5821932425 1134.58108993586 79.596 2 0.17744600827032533 0.0005180580224985198 0.0016058216265320956 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF'] 121628 19711 VFHPSQDLVF True PC9_epitope_Rep1 1187.5975089534697 1187.59640993586 80.644 2 0.177445091714066 0.0005180580224985198 0.001605855566045228 ['ENSG00000110107|ENST00000227524|PRPF19'] 24307 15465 EYVEKFYRI True PC9_epitope_Rep1 1245.6393737654498 1245.63772490379 64.307 3 0.17742420793440822 0.0005180580224985198 0.0016066290742343938 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 118178 17788 TYISWKEEL True PC9_epitope_Rep4 1167.58119018299 1167.58008993586 76.45 2 0.17742273990254573 0.0005180580224985198 0.0016066834622715652 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 87299 11327 QPQPQPYAV True PC9_epitope_Rep2 1026.5134449763398 1026.5123499358601 48.891 2 0.17741380842805593 0.0005180580224985198 0.001607014397667428 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 1591 5447 AEFAERSVA True NCI_RA007_Epitope_Rep5 978.4770594676199 978.47596993586 27.639 2 0.17740159664413954 0.0005180580224985198 0.0016074669879275318 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 52699 19934 KMDASLGNLFA True PC9_epitope_Rep2 1165.58014463717 1165.5790499358602 82.073 2 0.17739816848120699 0.0005180580224985198 0.0016075940646427499 ['ENSG00000196937|ENST00000359943|FAM3C'] 138053 9659 YGEPGEVFINK True NCI_RA007_Epitope_Rep5 1251.6135529404298 1251.61244993586 43.79 2 0.17739202771670737 0.0005180580224985198 0.0016078217184702084 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 28079 10966 FQTEVGKQL True PC9_epitope_Rep5 1048.5553097883198 1048.5542099358602 47.169 2 0.17739025350917506 0.0005180580224985198 0.0016078874988877522 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 103208 6348 SPKAALRYAA True PC9_epitope_Rep1 1046.58727862294 1046.5861899358601 29.228 2 0.1773824113133661 0.0005180580224985198 0.0016081782879827163 ['ENSG00000181789|ENST00000314797|COPG1'] 65886 8509 LSDPAAGAY True H1975_Epitope_Rep2 863.40249754503 863.40194496793 37.685 1 0.17738222130452122 0.0005180580224985198 0.0016081853341756817 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF'] 133707 16107 VYAVIPAEKF True PC9_epitope_Rep6 1135.62774645259 1135.62664993586 74.295 2 0.17737941539909877 0.0005180580224985198 0.0016082893905687303 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 1992 6041 AEIPETSNA True H1975_Epitope_Rep2 930.4294405688601 930.4288949679301 28.214 1 0.17737604902196594 0.0005180580224985198 0.001608414240831683 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 109780 10318 TEDWDQPVA True H1975_Epitope_Rep3 1059.45090428943 1059.45037496793 44.74 1 0.17737018477842406 0.0005180580224985198 0.0016086317537139208 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 108717 22637 SYRELFEFF True PC9_epitope_Rep3 1236.5815245361598 1236.5804299358601 92.341 2 0.1773662796754397 0.0005180580224985198 0.001608776615711415 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 129133 15443 VQQTVQDLFGR True PC9_epitope_Rep4 1289.67279915205 1289.67170993586 67.334 2 0.1773610848433359 0.0005180580224985198 0.0016089693411886793 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 3808 8166 AGVEGSLIVEK True H1975_Epitope_Rep3 1100.607739284 1100.60664993586 36.391 2 0.17735943296246193 0.0005180580224985198 0.0016090306299260985 ['ENSG00000144381|ENST00000388968|HSPD1'] 73691 21980 MYPYIFHVL True PC9_epitope_Rep1 1181.59433814933 1181.59324993586 89.367 2 0.17735569513876911 0.0005180580224985198 0.0016091693207703546 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 1648 7023 AEFVEVTK True NCI_RA007_Epitope_Rep1 921.4807478657299 921.4801949679301 31.316 1 0.17735535154039875 0.0005180580224985198 0.0016091820704872881 ['CON__P02769'] 108707 13187 SYREDPIVY True PC9_epitope_Rep5 1140.5451390274397 1140.5440499358601 55.728 2 0.1773490516861337 0.0005180580224985198 0.0016094158536704144 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 31746 8380 GEHGLIIRV True NCI_RA007_Epitope_Rep1 992.57671393924 992.57560993586 36.598 2 0.17734697453297157 0.0005180580224985198 0.0016094929428272862 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 142133 20221 YVQDFLNHL True PC9_epitope_Rep2 1147.56620882519 1147.5651099358602 83.198 2 0.17734343252140575 0.0005180580224985198 0.0016096244056429446 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 39094 5413 HHTTQQTFL True PC9_epitope_Rep4 1111.54105670651 1111.53994993586 27.552 2 0.17734161744268084 0.0005180580224985198 0.0016096917769986405 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 74771 15554 NHDFQALAL True PC9_epitope_Rep6 1027.50869394907 1027.50758993586 72.029 2 0.17733841084130555 0.0005180580224985198 0.0016098108052294549 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 21396 8010 ERIMKAQAL True PC9_epitope_Rep1 1058.5906497512199 1058.58954993586 35.63 2 0.17733754197287407 0.0005180580224985198 0.001609843058923395 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 133659 8988 VYANGIRNI True PC9_epitope_Rep6 1018.5559784946599 1018.55488993586 44.594 2 0.17732648052857983 0.0005180580224985198 0.0016102537328305509 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 47905 12008 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6584049037901 53.987 3 0.1773124148783242 0.0005180580224985198 0.001610776094258217 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 9064 16418 AVIDVGINRV True PC9_epitope_Rep1 1054.61349337078 1054.6123899358602 67.976 2 0.17729995660029657 0.0005180580224985198 0.0016112389038172106 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 137121 6342 YASSANLHLPK True H1975_Epitope_Rep1 1199.62987171091 1199.62822490379 29.459 3 0.1772998855136645 0.0005180580224985198 0.0016112415449794117 ['CON__P34955'] 103897 5719 SQADVSQKL True PC9_epitope_Rep1 974.50327421546 974.50216993586 26.817 2 0.17728807026245302 0.0005180580224985198 0.0016116805906561695 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 118951 12007 VADTVARVL True PC9_epitope_Rep2 942.5498304850598 942.54872993586 51.503 2 0.17727256494644827 0.0005180580224985198 0.0016122569381102757 ['ENSG00000145632|ENST00000274289|PLK2'] 60508 6340 LHAQGDPAL True PC9_epitope_Rep2 920.4715801643599 920.47048993586 29.786 2 0.17726998726181115 0.0005180580224985198 0.0016123527731271017 ['ENSG00000257365|ENST00000246166|FNTB', 'nc|ENSG00000257365|P49356-2|FNTB'] 97859 18466 SELPSPLITF True H1975_Epitope_Rep2 1102.5910265906998 1102.58992993586 76.631 2 0.1772619641180861 0.0005180580224985198 0.0016126510998623722 ['ENSG00000275004|ENST00000626650|ZNF280B'] 134806 22322 VYTVVDEMFL True PC9_epitope_Rep4 1214.5893123385397 1214.58820993586 94.1 2 0.17724123556500093 0.0005180580224985198 0.0016134221112327183 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 128809 11843 VQANSGAIVKL True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 50.883 2 0.17723600094218972 0.0005180580224985198 0.0016136168746507355 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 53221 8545 KQFEKQVEL True PC9_epitope_Rep1 1147.6237237013097 1147.62262993586 37.705 2 0.17722750732263942 0.0005180580224985198 0.0016139329449187717 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 96629 15232 SAIDRIFTL True H1975_Epitope_Rep3 1034.5760452329 1034.57494993586 63.996 2 0.17722397816178273 0.0005180580224985198 0.0016140642926534715 ['ENSG00000183576|ENST00000331768|SETD3'] 136864 7355 YADPVNAHY True H1975_Epitope_Rep3 1048.46140940348 1048.46030993586 33.266 2 0.17720955800480084 0.0005180580224985198 0.0016146010909610332 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 68345 15389 LTELPPLDDY True H1975_Epitope_Rep3 1174.57577044938 1174.5746699358601 64.604 2 0.17720888603090443 0.0005180580224985198 0.0016146261099200733 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 28998 12562 FTEEQAVLY True H1975_Epitope_Rep2 1098.5233409536997 1098.5222499358601 53.414 2 0.17720813427687035 0.0005180580224985198 0.0016146540997165476 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 42786 5916 IENIQRVAA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 29.442 2 0.17720414843329566 0.0005180580224985198 0.0016148025113628688 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 71083 22272 LYLEPQGTLF True PC9_epitope_Rep3 1179.6175756917098 1179.61646993586 90.954 2 0.17720275029187588 0.0005180580224985198 0.0016148545739605843 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 138852 13804 YKDGTELEL True PC9_epitope_Rep1 1066.51825557326 1066.51714993586 57.941 2 0.17720253892112905 0.0005180580224985198 0.0016148624449202253 ['ENSG00000143815|ENST00000272163|LBR'] 131064 6379 VTDSIRDEY True H1975_Epitope_Rep3 1096.5036681382799 1096.50256993586 29.514 2 0.17719936224596158 0.0005180580224985198 0.001614980741612812 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 28207 14663 FREGESVTVL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 61.404 2 0.17719684972607555 0.0005180580224985198 0.0016150743118721034 ['ENSG00000104881|ENST00000360957|PPP1R13L', 'PPP1R13L|p.S778C|1|0.29|ENSG00000104881|chr19:45382642-45382642|G/C|missense_variant'] 74879 5435 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 26.297 2 0.17719268590414383 0.0005180580224985198 0.0016152293912159745 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 32638 7796 GGNFGFGDSR True NCI_RA007_Epitope_Rep2 1012.4362572847999 1012.43516993586 34.952 2 0.17719201253878025 0.0005180580224985198 0.0016152544717533731 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 115188 9447 TRDPQVNAF True PC9_epitope_Rep3 1046.5145076054998 1046.5134099358602 41.279 2 0.17717278400888598 0.0005180580224985198 0.0016159708327891176 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 91135 18977 RFVNVVPTF True PC9_epitope_Rep4 1077.5971150306498 1077.5960099358601 81.086 2 0.17717240498899708 0.0005180580224985198 0.0016159849564148382 ['ENSG00000149806|ENST00000529639|FAU'] 115884 4942 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 24.092 3 0.17716873018376006 0.0005180580224985198 0.0016161218991054289 ['ENSG00000204560|ENST00000376442|DHX16'] 18963 12256 ELEKSVYWDY True H1975_Epitope_Rep1 1330.60813320682 1330.60702993586 52.166 2 0.17716866020730776 0.0005180580224985198 0.001616124506911128 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'SGSM2|p.P666Rfs*58|1|0.3|ENSG00000141258|chr17:2375519-2375519|C/-|frameshift_variant', 'ENSG00000141258|ENST00000268989|SGSM2'] 25431 9579 FEDVAFDEK True NCI_RA007_Epitope_Rep1 1098.48695544498 1098.4858499358602 41.259 2 0.17716768236521066 0.0005180580224985198 0.0016161609484991644 ['ENSG00000185624|ENST00000331483|P4HB'] 114893 9924 TQSEKQLVL True PC9_epitope_Rep1 1044.58152453616 1044.5804299358601 43.032 2 0.17715452457885905 0.0005180580224985198 0.001616651384434773 ['PODXL|p.G363Efs*14|1|0.12|ENSG00000128567|chr7:131508964-131508964|C/-|frameshift_variant', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENSG00000128567|ENST00000378555|PODXL', 'ENST00000446198.5_1_7:131189072-131193853:-|nuORF'] 32503 6166 GGEIQPVSVK True NCI_RA007_Epitope_Rep2 1012.5553097883198 1012.55420993586 28.592 2 0.1771481242438262 0.0005180580224985198 0.0016168900008093976 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000465573.1_1_2:198365552-198367980:+|nuORF'] 106750 20983 STYKFFEVI True PC9_epitope_Rep3 1132.580461907 1132.57936993586 85.987 2 0.17714720879059062 0.0005180580224985198 0.0016169241334891668 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 108265 21214 SYIEHIFEI True PC9_epitope_Rep2 1149.57062549929 1149.5695299358601 87.058 2 0.17714574247851309 0.0005180580224985198 0.0016169788064480301 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 95878 18692 RYLDEINLL True PC9_epitope_Rep6 1147.62372370131 1147.62262993586 84.542 2 0.17712712632923425 0.0005180580224985198 0.0016176730897715763 ['ENSG00000060558|ENST00000262958|GNA15'] 106497 17846 STLHLVLRL True PC9_epitope_Rep2 1050.65496425994 1050.65386993586 73.945 2 0.17712614453647046 0.0005180580224985198 0.0016177097137049863 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 90325 4781 REFDRRFSP True NCI_RA007_Epitope_Rep3 1208.6050539453997 1208.60341490379 25.769 3 0.17710887836099062 0.0005180580224985198 0.0016183539316577036 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 77673 7403 NTIDPSHPM True PC9_epitope_Rep6 1010.4491304676201 1010.44802993586 37.695 2 0.17710754601400655 0.0005180580224985198 0.0016184036535080801 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 3668 8653 AGQAVDDFIEK True H1975_Epitope_Rep1 1191.57716743171 1191.57606993586 38.213 2 0.17710357924176431 0.0005180580224985198 0.0016185516985199751 ['nc|ENSG00000142657|P52209-2|PGD', 'ENSG00000142657|ENST00000270776|PGD'] 142551 13698 YYLNDLERI True NCI_RA007_Epitope_Rep2 1197.6029882567298 1197.60188993586 57.927 2 0.17710295055379258 0.0005180580224985198 0.001618575163204005 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 75757 19217 NLLPKLHIV True PC9_epitope_Rep3 1045.66480066765 1045.6637099358602 79.137 2 0.17710217959166677 0.0005180580224985198 0.0016186039384882027 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 29884 20666 FVVDEVHLI True PC9_epitope_Rep3 1069.5807962601698 1069.5796899358602 84.765 2 0.1770996146059831 0.0005180580224985198 0.0016186996773484516 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 142678 15114 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 63.273 2 0.177089974217194 0.0005180580224985198 0.0016190595584702674 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 121957 22334 VFTEVANLF True PC9_epitope_Rep2 1038.53859709502 1038.53750993586 91.392 2 0.17708557785483767 0.0005180580224985198 0.0016192237037463532 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 27476 11060 FMDPGPEGKLY True H1975_Epitope_Rep1 1252.579810284 1252.5787099358602 47.503 2 0.1770795548830308 0.0005180580224985198 0.0016194486081660432 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 4187 12458 AHWQFETAL True NCI_RA007_Epitope_Rep3 1101.5243440132099 1101.5232499358601 56.223 2 0.17707647445199495 0.0005180580224985198 0.0016195636469552377 ['ENSG00000185262|ENST00000327490|UBALD2', 'ENSG00000153443|ENST00000283474|UBALD1'] 69666 7827 LVDTAGQDEY True H1975_Epitope_Rep1 1109.48768372097 1109.4865899358601 35.057 2 0.17707069573659157 0.0005180580224985198 0.0016197794753325717 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 58503 9884 LEQEIATYR True PC9_epitope_Rep5 1121.57168812845 1121.5705899358602 42.989 2 0.177067893744792 0.0005180580224985198 0.0016198841368747685 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 140174 15039 YQTEIGQTL True PC9_epitope_Rep4 1051.51858992643 1051.51807496793 65.779 1 0.1770653123998002 0.0005180580224985198 0.0016199805626896093 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 4237 20875 AIDPHLLLSV True PC9_epitope_Rep2 1076.6229954253201 1076.62188993586 85.738 2 0.17706201929973142 0.0005180580224985198 0.0016201035843697296 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 70969 18182 LYGRNFNYL True PC9_epitope_Rep1 1158.5821932425 1158.58108993586 74.727 2 0.17705923036349697 0.0005180580224985198 0.0016202077791135365 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 41517 19708 HYNSDLNNLLF True PC9_epitope_Rep4 1348.6411646706 1348.64006993586 83.93 2 0.17705760307853233 0.0005180580224985198 0.0016202685776303492 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 118610 13843 TYSEKTTLF True PC9_epitope_Rep5 1088.5389910178399 1088.5378899358602 58.267 2 0.1770552568721559 0.0005180580224985198 0.0016203562404650718 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 74766 18138 NHDFQALAL True PC9_epitope_Rep3 1027.50869394907 1027.50758993586 74.968 2 0.17705306417484942 0.0005180580224985198 0.0016204381719345875 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 62630 21714 LLLEILHEI True PC9_epitope_Rep4 1091.6590465808702 1091.6579499358602 91.72 2 0.17705277636363131 0.0005180580224985198 0.0016204489264839714 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 1906 6948 AEIHVPEEQA True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 31.645 2 0.1770521479391096 0.0005180580224985198 0.0016204724088697555 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C'] 104149 14345 SQESKVLYL True PC9_epitope_Rep3 1065.57062549929 1065.5695299358601 60.263 2 0.177043347041477 0.0005180580224985198 0.0016208013084749418 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 17783 18332 EHSLPTLGL True PC9_epitope_Rep5 965.51819600361 965.51708993586 75.529 2 0.17704323492995339 0.0005180580224985198 0.0016208054986419575 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 6630 19270 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 78.924 2 0.1770348005664514 0.0005180580224985198 0.0016211207640006455 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 54837 16446 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 71.292 2 0.17703040642132095 0.0005180580224985198 0.0016212850356690461 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 64921 4882 LQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep2 1061.51754476105 1061.51644993586 23.612 2 0.17702696336466045 0.0005180580224985198 0.0016214137632900249 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 121646 13010 VFIDKQTNL True PC9_epitope_Rep5 1076.5866099166 1076.58550993586 55.05 2 0.17702347542281519 0.0005180580224985198 0.001621544179497424 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 66237 11056 LSEWQKELY True H1975_Epitope_Rep1 1194.5920892198599 1194.59098993586 47.488 2 0.17702155838822356 0.0005180580224985198 0.0016216158630277398 ['ENSG00000196453|ENST00000247930|ZNF777'] 89691 12945 RAAEEFVNV True PC9_epitope_Rep3 1033.5192586327698 1033.5181699358602 54.815 2 0.17701934242433537 0.0005180580224985198 0.0016216987283533297 ['ENSG00000132661|ENST00000254998|NXT1'] 93602 9186 RQPDSGISSI True PC9_epitope_Rep5 1058.5356369729 1058.53452993586 40.278 2 0.1770083352076393 0.0005180580224985198 0.0016221104028770752 ['ENSG00000163902|ENST00000296255|RPN1'] 26155 11985 FHAIIQERL True PC9_epitope_Rep4 1125.62947778809 1125.62782490379 53.893 3 0.17700090970591775 0.0005180580224985198 0.0016223881788737583 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 6741 8170 AQATISFPK True NCI_RA007_Epitope_Rep5 961.5232813840499 961.52218993586 38.109 2 0.1769975076455776 0.0005180580224985198 0.0016225154603551751 ['ENSG00000094804|ENST00000209728|CDC6'] 38897 12634 HHFEGAQIL True PC9_epitope_Rep5 1050.5246783663797 1050.5235899358602 53.599 2 0.17699184233799925 0.0005180580224985198 0.0016227274390305307 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 47727 17022 IYDPNLAFLRF True NCI_RA007_Epitope_Rep3 1367.7237720957498 1367.72266993586 74.817 2 0.17699039360609317 0.0005180580224985198 0.001622781650649943 ['ENSG00000197943|ENST00000564138|PLCG2'] 3072 10230 AFVTFDDHD True NCI_RA007_Epitope_Rep4 1065.4403396057298 1065.43924993586 46.206 2 0.17698806698317776 0.0005180580224985198 0.0016228687167897352 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 14638 12455 DVDPETLSY True H1975_Epitope_Rep3 1037.45532096353 1037.45477496793 53.102 1 0.17698778362149895 0.0005180580224985198 0.0016228793209795748 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 47954 18704 IYISTLKTEF True PC9_epitope_Rep4 1213.6594405036901 1213.65834993586 80.025 2 0.1769847808162613 0.0005180580224985198 0.0016229916986490681 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 86932 20317 QLVDIIEKV True PC9_epitope_Rep1 1055.62266107215 1055.6215699358602 82.978 2 0.1769828355882601 0.0005180580224985198 0.0016230645014658207 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 9744 11281 AYHELAQVY True PC9_epitope_Rep4 1092.5240096600398 1092.52290993586 51.169 2 0.17698217609969832 0.0005180580224985198 0.0016230891844690285 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3'] 86522 15880 QLAQFVHEV True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 66.072 2 0.17698110592835564 0.0005180580224985198 0.0016231292390989239 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000535158.5_1_12:31227017-31242187:+|nuORF', 'ENST00000536265.5_1_12:31227017-31242486:+|nuORF', 'ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF', 'ENST00000542244.5_1_12:31237807-31242486:+|nuORF'] 104422 17454 SQLELGVHL True PC9_epitope_Rep4 994.54474510462 994.54364993586 75.133 2 0.17697133196057788 0.0005180580224985198 0.0016234951073220017 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 33069 21488 GIMDRFLQV True PC9_epitope_Rep1 1077.5641006502099 1077.56300993586 87.497 2 0.17696910903132904 0.0005180580224985198 0.0016235783295981388 ['ENSG00000157456|ENST00000288207|CCNB2'] 74251 5343 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 25.613 2 0.1769565682004679 0.0005180580224985198 0.001624047914687781 ['ENSG00000167658|ENST00000309311|EEF2'] 121075 10155 VEQWPYRAVA True H1975_Epitope_Rep3 1217.61930702721 1217.61820993586 44.103 2 0.17695102023609693 0.0005180580224985198 0.0016242556988118608 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3', 'CCT3|p.Q442H|1|0.1|ENSG00000163468|chr1:156311025-156311025|C/A|missense_variant'] 9614 21564 AYALLSHFL True PC9_epitope_Rep3 1033.5596668927699 1033.55856993586 88.241 2 0.1769455450036843 0.0005180580224985198 0.0016244607850581987 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 93514 19397 RQLDMELVSV True PC9_epitope_Rep5 1188.61725842188 1188.6161699358602 79.656 2 0.17693993326432367 0.0005180580224985198 0.0016246710113685709 ['ENSG00000089902|ENST00000262241|RCOR1'] 53368 12523 KQTALVELLK True PC9_epitope_Rep4 1141.7070594024499 1141.7054249037901 55.989 3 0.17693882107184383 0.0005180580224985198 0.0016247126794255488 ['CON__P02769'] 138314 17335 YHDINVYSL True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 71.934 2 0.17693878495446833 0.0005180580224985198 0.0016247140325733554 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 24006 8533 EYMKHTRLF True PC9_epitope_Rep4 1223.6121134717898 1223.61046490379 40.299 3 0.1769360276266401 0.0005180580224985198 0.001624817339981597 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 1928 13455 AEILELAGNAA True H1975_Epitope_Rep3 1070.5607890915799 1070.5596899358602 57.028 2 0.1769354953481899 0.0005180580224985198 0.001624837283346819 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 31669 10058 GEFSITYKP True H1975_Epitope_Rep3 1040.5178616504397 1040.51676993586 43.726 2 0.17693460473628997 0.0005180580224985198 0.0016248706532685482 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 54954 17274 KYQDVYVEL True PC9_epitope_Rep5 1155.5811901829898 1155.58008993586 71.452 2 0.1769340718286996 0.0005180580224985198 0.0016248906208626123 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 134770 12608 VYTTTVHWL True NCI_RA007_Epitope_Rep5 1118.5760452329 1118.57494993586 55.15 2 0.1769307049025988 0.0005180580224985198 0.0016250167824004695 ['ENSG00000174231|ENST00000304992|PRPF8'] 124940 16149 VHSEQVFAL True PC9_epitope_Rep5 1028.5290950404797 1028.5279899358602 67.104 2 0.17692854158865545 0.0005180580224985198 0.0016250978487603307 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 116720 11037 TVDGVVFHY True H1975_Epitope_Rep1 1035.50254593947 1035.5014499358601 47.416 2 0.17692059598227342 0.0005180580224985198 0.0016253956310493922 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant', 'nc|ENSG00000038427|P13611-4|VCAN'] 115561 7454 TRSPVKVTL True PC9_epitope_Rep2 999.60767971435 999.60658993586 34.046 2 0.17691801436262075 0.0005180580224985198 0.0016254923957298858 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 77122 12196 NRMPDQISV True PC9_epitope_Rep3 1058.51787873378 1058.51678993586 51.944 2 0.17691744181589406 0.0005180580224985198 0.0016255138567994331 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1'] 49583 7529 KFVETHPEF True NCI_RA007_Epitope_Rep4 1132.5553097883198 1132.5542099358602 35.604 2 0.17689764655644774 0.0005180580224985198 0.0016262560274358591 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 27946 12133 FQEHLQLQNL True NCI_RA007_Epitope_Rep2 1268.6513354314798 1268.6502299358601 51.789 2 0.17688819180154425 0.0005180580224985198 0.001626610628082874 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'CLTC-VMP1|2|fusion', 'CLTC-VMP1|23|fusion', 'CLTC-VMP1|25|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 1617 16497 AEFLKVFLP True H1975_Epitope_Rep2 1062.6113681124598 1062.61026993586 68.675 2 0.17688647116376516 0.0005180580224985198 0.0016266751689422688 ['ENSG00000176171|ENST00000368636|BNIP3'] 17893 13401 EHYYNAISV True PC9_epitope_Rep2 1094.50327421546 1094.5021699358601 56.827 2 0.17688369983131305 0.0005180580224985198 0.001626779126589809 ['ENSG00000198730|ENST00000361367|CTR9'] 6013 16615 APIWLEHAA True PC9_epitope_Rep1 1006.5236157372199 1006.52250993586 68.736 2 0.17687817677989007 0.0005180580224985198 0.0016269863259916293 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 125964 17631 VLDINSIDNLY True H1975_Epitope_Rep2 1277.65033237197 1277.6492299358601 73.134 2 0.17687795920516772 0.0005180580224985198 0.0016269944889322227 ['ENST00000486882.5_1_1:79094613-79107491:+|nuORF', 'ENSG00000137959|ENST00000370751|IFI44L'] 56090 14595 LATRALPEL True PC9_epitope_Rep2 982.5811306133398 982.58002993586 61.409 2 0.1768773329162116 0.0005180580224985198 0.001627017986190106 ['ENSG00000173801|ENST00000393931|JUP'] 49905 19800 KIIDIFTTL True PC9_epitope_Rep6 1062.6324974798601 1062.6314099358601 88.82 2 0.176863048553802 0.0005180580224985198 0.001627554002574803 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 35358 7561 GRYAGEESL True PC9_epitope_Rep5 980.4563240230399 980.45522993586 34.032 2 0.17685149351903381 0.0005180580224985198 0.001627987731153457 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 115713 8539 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 39.638 2 0.17685134719036485 0.0005180580224985198 0.0016279932244732563 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 69669 7991 LVDTAGQDEY True H1975_Epitope_Rep3 1109.48768372097 1109.4871749679298 35.708 1 0.17684990129794464 0.0005180580224985198 0.0016280475056715182 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 47700 18000 IYAPKLQEF True PC9_epitope_Rep3 1107.59644632431 1107.5953499358602 74.44 2 0.1768454950513739 0.0005180580224985198 0.0016282129346502344 ['ENSG00000175305|ENST00000308108|CCNE2'] 11941 15232 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.5480899358602 70.689 2 0.17683718159440942 0.0005180580224985198 0.001628525102542249 ['ENSG00000273749|ENST00000617928|CYFIP1'] 118696 13439 TYTDVTPRQF True PC9_epitope_Rep5 1226.59315184902 1226.5920499358601 56.71 2 0.17682985447726182 0.0005180580224985198 0.0016288002833538423 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 40241 21652 HQILTPFLL True PC9_epitope_Rep5 1080.6331661862 1080.63206993586 88.329 2 0.17682483545284794 0.0005180580224985198 0.0016289888071744521 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 5816 18617 APELLFFAK True PC9_epitope_Rep6 1034.5800679841798 1034.5789699358602 84.253 2 0.17682153086934738 0.0005180580224985198 0.0016291129453604959 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 47857 15522 IYHTGTFAQI True PC9_epitope_Rep1 1149.5818588893299 1149.5807699358602 64.528 2 0.1768184709239085 0.0005180580224985198 0.0016292279020540758 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'LONP1|p.M552Hfs*3|1|0.14|ENSG00000196365|chr19:5699059-5699060|-/C|frameshift_variant', 'ENST00000587552.5_1_19:5708410-5719801:-|nuORF'] 141845 5203 YVDGVEVHN True NCI_RA007_Epitope_Rep5 1030.47197408718 1030.47086993586 26.71 2 0.17681830235333085 0.0005180580224985198 0.0016292342351861683 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 88291 12679 QSELVGQLY True H1975_Epitope_Rep2 1035.52367530687 1035.52256993586 53.871 2 0.17681056466839534 0.0005180580224985198 0.0016295249635884786 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 111621 15880 TIDPSNPMV True PC9_epitope_Rep1 972.45863252216 972.4580849679301 65.891 1 0.17680856660437522 0.0005180580224985198 0.001629600045382386 ['ENSG00000198730|ENST00000361367|CTR9'] 44535 8633 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 43.024 3 0.17680025650691247 0.0005180580224985198 0.0016299123533410605 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 65319 6639 LRDEHNYTL True PC9_epitope_Rep2 1159.56218607391 1159.56055490379 30.946 3 0.1767984003054745 0.0005180580224985198 0.0016299821208183441 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 41226 12438 HVLEEVQQV True PC9_epitope_Rep1 1079.56112344475 1079.56002993586 52.707 2 0.1767965025956858 0.0005180580224985198 0.0016300534515268023 ['ENSG00000136026|ENST00000378026|CKAP4'] 92874 11054 RPFQGTMGV True PC9_epitope_Rep2 991.4909357099498 991.48982993586 47.838 2 0.17679388873440482 0.0005180580224985198 0.0016301517059022913 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 105588 9446 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 41.301 2 0.17678594192211128 0.0005180580224985198 0.0016304504609682203 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 23991 6878 EYMKHTRLF True NCI_RA007_Epitope_Rep1 1223.6121134717898 1223.61046490379 30.758 3 0.1767817378825099 0.0005180580224985198 0.0016306085311869577 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 41446 20082 HYINMPVQF True PC9_epitope_Rep3 1147.5484505860697 1147.5473499358602 82.497 2 0.1767812006787383 0.0005180580224985198 0.0016306287309411586 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF', 'ENST00000513183.1_1_18:13124610-13124766:+|nuORF', 'ENST00000510237.5_1_18:13103579-13124766:+|nuORF'] 142501 21332 YYIFIPSKF True PC9_epitope_Rep1 1176.6219327961599 1176.62137496793 86.884 1 0.17678006713774577 0.0005180580224985198 0.0016306713547877695 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 49911 19408 KIIGIMEEV True PC9_epitope_Rep1 1030.5732683515798 1030.57216993586 79.463 2 0.17677917630677054 0.0005180580224985198 0.0016307048529414939 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 101645 19486 SLLSHVEQL True PC9_epitope_Rep5 1024.55530978832 1024.5542099358602 80.006 2 0.17677089194386414 0.0005180580224985198 0.0016310164050456072 ['ENSG00000116670|ENST00000376692|MAD2L2', 'ENST00000376664.10_1_1:11735929-11741152:-|nuORF'] 70787 18110 LYANMFERL True PC9_epitope_Rep6 1155.57466533391 1155.5735699358602 82.296 2 0.17676784180713465 0.0005180580224985198 0.0016311311273124794 ['ENSG00000004478|ENST00000001008|FKBP4'] 116746 13908 TVDNVQPLLY True H1975_Epitope_Rep1 1160.607739284 1160.60664993586 58.649 2 0.17675588165235256 0.0005180580224985198 0.0016315810526855367 ['ENSG00000145332|ENST00000273963|KLHL8'] 90596 10218 REMEEVLTV True H1975_Epitope_Rep2 1104.54851015572 1104.54740993586 44.308 2 0.17674467358012008 0.0005180580224985198 0.0016320027985066194 ['ENSG00000164715|ENST00000297293|LMTK2'] 28268 13674 FRMTDQEAI True PC9_epitope_Rep5 1109.5175443806097 1109.51644993586 57.622 2 0.17674258695051664 0.0005180580224985198 0.0016320813278378752 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 107844 19249 SVVESVFKL True PC9_epitope_Rep4 1006.5698972232999 1006.56880993586 82.144 2 0.17673724390237605 0.0005180580224985198 0.0016322824282124482 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 54344 15233 KYEELFPAF True NCI_RA007_Epitope_Rep5 1142.5648118428596 1142.56370993586 65.277 2 0.1767342497777069 0.0005180580224985198 0.00163239513121335 ['ENSG00000105402|ENST00000263354|NAPA'] 137812 5618 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 26.609 2 0.17672052818338294 0.0005180580224985198 0.0016329117307373763 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 6827 12542 AQFEHTILL True NCI_RA007_Epitope_Rep1 1070.5760452329 1070.57494993586 52.765 2 0.17671780048863395 0.0005180580224985198 0.001633014444273331 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 7042 19183 AQQELKLLL True PC9_epitope_Rep2 1054.6386454894598 1054.63754993586 79.161 2 0.17670822741129721 0.0005180580224985198 0.0016333749773919585 ['ENSG00000119041|ENST00000263956|GTF3C3'] 99852 16972 SILHDVVEV True PC9_epitope_Rep4 1009.54441075145 1009.54330993586 73.273 2 0.17670788195928158 0.0005180580224985198 0.001633387989002815 ['ENST00000572148.1_1_17:4863453-4863890:-|nuORF', 'ENSG00000091640|ENST00000206020|SPAG7'] 112838 16583 TLITDGMRSV True PC9_epitope_Rep1 1091.56449457303 1091.5633899358602 68.611 2 0.17670473267042053 0.0005180580224985198 0.0016335066132194252 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000397477.2_1_22:32665833-32665884:+|nuORF'] 142155 10946 YVSGELEHV True PC9_epitope_Rep5 1031.4923751785898 1031.4912699358601 47.094 2 0.17670133911816993 0.0005180580224985198 0.0016336344477588145 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 71155 20315 LYMDKFEEF True PC9_epitope_Rep3 1220.5423621461198 1220.54126993586 83.389 2 0.1766908640758474 0.0005180580224985198 0.001634029104026381 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG', 'ENST00000445715.5_1_Y:21755293-21766003:+|nuORF'] 37526 13169 GVVEVTHDL True PC9_epitope_Rep5 967.4974605590298 967.49636993586 55.659 2 0.17668309038500218 0.0005180580224985198 0.0016343220462635107 ['ENSG00000149257|ENST00000358171|SERPINH1'] 17016 2686 EGDKHTLSKK True NCI_RA007_Epitope_Rep2 1141.6091362663299 1141.60802993586 14.672 2 0.17667279686255374 0.0005180580224985198 0.0016347100262702546 ['ENSG00000197956|ENST00000368719|S100A6', 'ENST00000462951.2_1_1:153507620-153508442:-|nuORF'] 118184 15031 TYITSVSRL True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 62.944 2 0.17667202207401828 0.0005180580224985198 0.0016347392330730939 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 24161 12749 EYQELMNVK True PC9_epitope_Rep5 1152.54851015572 1152.54740993586 54.047 2 0.17667028521133313 0.0005180580224985198 0.0016348047085865797 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 16372 6156 EEIQETQTP True H1975_Epitope_Rep3 1073.48768372097 1073.4865899358601 28.691 2 0.17666932716195685 0.0005180580224985198 0.0016348408258498365 ['ENSG00000155438|ENST00000285814|NIFK'] 40839 8520 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48777496793 37.727 1 0.17666885432820736 0.0005180580224985198 0.0016348586513853292 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 89589 12956 QYNPKFQTL True PC9_epitope_Rep5 1137.58185888933 1137.5807699358602 54.845 2 0.17666310885824058 0.0005180580224985198 0.0016350752675486592 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 27162 16859 FLLDPVKGERL True PC9_epitope_Rep4 1285.73942215989 1285.73776490379 72.828 3 0.17665611698464176 0.0005180580224985198 0.0016353389144931803 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 31249 17022 GDEELDSLIK True PC9_epitope_Rep3 1117.5502839775297 1117.54918993586 70.63 2 0.17664698723986627 0.0005180580224985198 0.001635683239572077 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 25559 13830 FEITPPVVLR True H1975_Epitope_Rep1 1169.68084465461 1169.6797499358602 58.344 2 0.1766452582035752 0.0005180580224985198 0.001635748457737777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 107646 10462 SVQGIILYR True NCI_RA007_Epitope_Rep1 1047.6076797143498 1047.60658993586 44.677 2 0.1766154039984873 0.0005180580224985198 0.0016368749504078648 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 9906 20339 AYLLNLNHL True PC9_epitope_Rep5 1069.59202965021 1069.59092993586 83.269 2 0.17661506841832494 0.0005180580224985198 0.0016368876173130666 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 106736 7173 STWEGIQAGK True NCI_RA007_Epitope_Rep4 1075.5298233164697 1075.5287299358602 34.214 2 0.1766106731519871 0.0005180580224985198 0.0016370535313616822 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 18916 10377 ELEEDFIK True NCI_RA007_Epitope_Rep2 1021.4967918526899 1021.49568993586 44.955 2 0.17660134276898604 0.0005180580224985198 0.0016374057937418543 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 29023 6719 FTEPNRHFY True H1975_Epitope_Rep1 1209.5567067706497 1209.5550749037902 30.888 3 0.17659218662710752 0.0005180580224985198 0.0016377515515611724 ['ENSG00000165355|ENST00000298097|FBXO33'] 54836 16362 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 70.94 2 0.176590725079645 0.0005180580224985198 0.0016378067498561536 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 32448 15453 GFVTFDDHD True PC9_epitope_Rep1 1051.42468954159 1051.42358993586 64.26 2 0.17658719734211506 0.0005180580224985198 0.001637939989672249 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 39149 6913 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.5406899358602 33.815 2 0.17658258237455796 0.0005180580224985198 0.0016381143096830721 ['ENSG00000156482|ENST00000287038|RPL30'] 62222 7218 LLEVVQSGGK True H1975_Epitope_Rep3 1028.5866099165996 1028.58550993586 32.735 2 0.17657311893262917 0.0005180580224985198 0.0016384718280120986 ['ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8', 'ENST00000484488.5_1_20:60711915-60714832:-|nuORF'] 102471 23398 SLVELLNQI True PC9_epitope_Rep1 1027.5913609438699 1027.59026993586 94.784 2 0.17656977334316687 0.0005180580224985198 0.0016385982393621512 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 61402 11777 LITPAVVSER True PC9_epitope_Rep4 1083.62880908175 1083.6277099358601 53.067 2 0.1765618484648892 0.0005180580224985198 0.0016388977157180322 ['ENSG00000118181|ENST00000527673|RPS25'] 96280 11213 RYQTQPVTL True PC9_epitope_Rep1 1104.5927579261997 1104.5916699358602 48.011 2 0.1765552393732774 0.0005180580224985198 0.0016391475112082145 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 71258 22122 LYPQFMFHL True PC9_epitope_Rep1 1194.5895871220598 1194.58848993586 89.904 2 0.1765432835393301 0.0005180580224985198 0.001639599487643667 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 68279 11310 LTEEETQFY True H1975_Epitope_Rep2 1158.5080848123798 1158.50698993586 48.551 2 0.17654136436058113 0.0005180580224985198 0.0016396720515945231 ['ENSG00000211455|ENST00000389032|STK38L', 'nc|ENSG00000211455|Q9Y2H1-2|STK38L', 'ENSG00000112079|ENST00000229812|STK38'] 108459 21909 SYLSSILRF True PC9_epitope_Rep5 1084.59169529704 1084.5905899358602 89.313 2 0.17654111525203653 0.0005180580224985198 0.0016396814705987497 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 98367 13479 SEYLRYEDTLL True H1975_Epitope_Rep2 1400.6823607762399 1400.6812699358602 56.979 2 0.17654075398993085 0.0005180580224985198 0.0016396951303200126 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 140836 5822 YSDMREANY True H1975_Epitope_Rep2 1147.46042342731 1147.4598749679299 27.386 1 0.17653850774343635 0.0005180580224985198 0.0016397800659507644 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 62461 18360 LLIDDKGTIKL True PC9_epitope_Rep1 1227.74383883399 1227.74218490379 75.413 3 0.17652122333307949 0.0005180580224985198 0.0016404337757778174 ['ENSG00000170312|ENST00000395284|CDK1'] 24001 8948 EYMKHTRLF True PC9_epitope_Rep2 1223.6121134717898 1223.61046490379 39.775 3 0.17651235491519712 0.0005180580224985198 0.0016407692875304834 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 8547 9132 ATVAVPLVGK True NCI_RA007_Epitope_Rep4 953.5909670210499 953.58986993586 41.966 2 0.176505114055251 0.0005180580224985198 0.0016410432761455676 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 47850 10476 IYHNPTANSF True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 45.283 2 0.17650150309909216 0.0005180580224985198 0.0016411799290926977 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 40353 4497 HQRITEEL True NCI_RA007_Epitope_Rep3 1024.53015766964 1024.5290699358602 24.526 2 0.1765010773850315 0.0005180580224985198 0.0016411960405573643 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 125272 19701 VILPKFTAV True PC9_epitope_Rep1 986.6164534929 986.61534993586 80.605 2 0.17649803749698764 0.0005180580224985198 0.0016413110919809328 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 26826 19207 FLASESLIKQI True PC9_epitope_Rep4 1247.71253870571 1247.7114499358602 81.979 2 0.17649674665098566 0.0005180580224985198 0.0016413599494041473 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 24288 17400 EYTPRSWNF True PC9_epitope_Rep2 1198.54072235334 1198.5396299358601 72.188 2 0.17649282304160308 0.0005180580224985198 0.0016415084636235782 ['ENSG00000156671|ENST00000542569|SAMD8'] 91409 15933 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.60730993586 69.212 2 0.17649273483512395 0.0005180580224985198 0.001641511802519465 ['ENSG00000079246|ENST00000392132|XRCC5'] 134339 9904 VYPDGIRHI True PC9_epitope_Rep1 1068.5716285587998 1068.5705299358601 42.953 2 0.1764867110658135 0.0005180580224985198 0.0016417398374465504 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 21906 7629 ESDPAYQQY True H1975_Epitope_Rep2 1099.44581890899 1099.44527496793 34.299 1 0.17648025944805523 0.0005180580224985198 0.0016419841041251271 ['ENSG00000155660|ENST00000652332|PDIA4'] 6750 16426 AQDEHLITF True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 68.426 2 0.17647838489069703 0.0005180580224985198 0.0016420550841396563 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 87783 14521 QRDGIITQL True PC9_epitope_Rep1 1042.5771078620598 1042.5760099358602 60.68 2 0.17647089328991866 0.0005180580224985198 0.001642338783883796 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF', 'AKAP9|p.V1050Wfs*10|1|0.45|ENSG00000127914|chr7:92003064-92003064|G/-|frameshift_variant', 'AKAP9|p.K291Efs*9|1|0.09|ENSG00000127914|chr7:91995734-91995735|-/A|frameshift_variant', 'AKAP9|p.H562Qfs*4|1|0.07|ENSG00000127914|chr7:92001602-92001603|AT/-|frameshift_variant'] 17349 21782 EHDAFIFAL True PC9_epitope_Rep3 1061.51819600361 1061.5170899358602 89.083 2 0.1764672340583855 0.0005180580224985198 0.0016424773733187041 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 13458 7083 DNEFGYSNR True NCI_RA007_Epitope_Rep1 1100.4523012717598 1100.45120993586 31.545 2 0.17645872289451728 0.0005180580224985198 0.001642799769742811 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 48089 12063 IYNGDMEKI True PC9_epitope_Rep3 1081.51139637101 1081.51028993586 51.443 2 0.17645498049290742 0.0005180580224985198 0.001642941549131956 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 98304 5253 SEVQSTVEA True H1975_Epitope_Rep2 948.4400052525599 948.43945496793 25.272 1 0.17645326886333276 0.0005180580224985198 0.001643006397617917 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 31566 6872 GEEEVGPVA True H1975_Epitope_Rep2 885.4079768482898 885.4074249679301 31.352 1 0.17644694875801914 0.0005180580224985198 0.0016432458695675872 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 9464 7352 AVVGVVAGGGR True PC9_epitope_Rep3 940.5454138109598 940.54430993586 33.287 2 0.17644060600861738 0.0005180580224985198 0.0016434862346544744 ['ENSG00000161016|ENST00000528957|RPL8'] 98063 8608 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 38.067 2 0.17644023522503577 0.0005180580224985198 0.0016435002869732648 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 10152 9240 AYVHM[Oxidation]VTHF True PC9_epitope_Rep1 1119.5171508382302 1119.51604993586 40.393 2 0.17643451277583747 0.0005180580224985198 0.0016437171772083015 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 131123 9903 VTEFEDIKSGY True H1975_Epitope_Rep1 1286.6030478263797 1286.6019499358601 43.027 2 0.17641642832999352 0.0005180580224985198 0.0016444027958894812 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 106894 12991 SVDGVIKEV True PC9_epitope_Rep3 944.51786165044 944.51676993586 54.998 2 0.1764143297363497 0.0005180580224985198 0.0016444823764503516 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 72939 18302 MQAERIFSEV True PC9_epitope_Rep1 1208.5859582936 1208.58486993586 75.187 2 0.1764073874283441 0.0005180580224985198 0.0016447456625050317 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 21581 5590 ERQPGAASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 26.579 2 0.17640336452359115 0.0005180580224985198 0.0016448982499195036 ['ENSG00000180921|ENST00000388913|FAM83H'] 68113 5961 LTDPEAAKY True H1975_Epitope_Rep3 1006.4971262058598 1006.49602993586 27.94 2 0.17640283633751766 0.0005180580224985198 0.0016449182848911155 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000459805.5_1_1:155184905-155186549:-|nuORF', 'chr1:155236469-155237344|112|11.08|0.59|4.23|-|0|GBA1,None|1'] 26040 7564 FGHYQQAEL True NCI_RA007_Epitope_Rep3 1091.50360856863 1091.5025099358602 36.877 2 0.17639968608447806 0.0005180580224985198 0.0016450377842761473 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000535641.5_1_12:121766117-121773388:-|nuORF', 'ENST00000535472.5_1_12:121764442-121775147:-|nuORF', 'ENST00000545218.5_1_12:121756099-121775126:-|nuORF'] 23956 22956 EYLPIGGLAEF True PC9_epitope_Rep2 1207.6124903112698 1207.6113899358602 93.793 2 0.17639584417037113 0.0005180580224985198 0.001645183532390488 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 39235 18839 HIIENIVAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 77.686 2 0.1763940167391811 0.0005180580224985198 0.0016452528629580477 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 40195 15480 HQFESSFEL True PC9_epitope_Rep6 1122.4981888350198 1122.49708993586 71.715 2 0.17638762721335954 0.0005180580224985198 0.001645495296974425 ['ENSG00000197442|ENST00000359015|MAP3K5'] 73683 21205 MYPDVFAHF True PC9_epitope_Rep1 1125.4953523840497 1125.4942499358601 86.396 2 0.17638438154635164 0.0005180580224985198 0.0016456184591079118 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 37510 19867 GVVDPRAISVL True PC9_epitope_Rep1 1124.65535818276 1124.6542699358602 81.237 2 0.17638437460433984 0.0005180580224985198 0.0016456187225437784 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 107565 9093 SVPEGPWWRK True NCI_RA007_Epitope_Rep4 1240.63529144452 1240.6336349037902 41.812 3 0.17638054430738587 0.0005180580224985198 0.0016457640813139014 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 3972 13318 AHDTTLVAL True PC9_epitope_Rep2 939.50254593947 939.50144993586 56.502 2 0.1763746553899666 0.0005180580224985198 0.0016459875892746824 ['ENSG00000134575|ENST00000672073|ACP2'] 96306 9225 RYSEYAEEF True NCI_RA007_Epitope_Rep5 1192.5036681382796 1192.50256993586 42.134 2 0.1763696362787779 0.0005180580224985198 0.001646178108605344 ['ENSG00000139505|ENST00000381801|MTMR6'] 133810 10453 VYFSKSEQL True PC9_epitope_Rep6 1099.5549754351498 1099.5538699358601 50.959 2 0.17636797207343377 0.0005180580224985198 0.0016462412846825817 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant'] 10154 7744 AYVHM[Oxidation]VTHF True PC9_epitope_Rep2 1119.5171508382302 1119.51604993586 35.162 2 0.17636702223321288 0.0005180580224985198 0.001646277343327967 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 74794 10994 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.4657899358601 47.177 2 0.176366187751303 0.0005180580224985198 0.0016463090232953406 ['ENSG00000144597|ENST00000396842|EAF1'] 22437 7085 ETERIVTTY True H1975_Epitope_Rep3 1110.5557037111398 1110.55460993586 32.22 2 0.17636019479353948 0.0005180580224985198 0.0016465365556979797 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 130878 5517 VTDALNATR True PC9_epitope_Rep5 959.50360856863 959.50250993586 26.229 2 0.17635658773580035 0.0005180580224985198 0.0016466735187008461 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 77100 13804 NRLTEMETL True PC9_epitope_Rep4 1105.5437591284501 1105.5426699358602 60.993 2 0.17635347953359778 0.0005180580224985198 0.0016467915488925372 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 62002 11718 LLDPSRGTDFV True H1975_Epitope_Rep2 1218.6244519773 1218.62334993586 50.148 2 0.1763441453438571 0.0005180580224985198 0.0016471460543019266 ['ENST00000470731.5_1_7:2598728-2641152:+|nuORF', 'IQCE|p.R613Afs*14|1|0.59|ENSG00000106012|chr7:2605966-2605967|-/T|frameshift_variant', 'nc|ENSG00000106012|Q6IPM2-2|IQCE', 'nc|ENSG00000106012|Q6IPM2-3|IQCE', 'nc|ENSG00000106012|Q6IPM2-4|IQCE', 'ENSG00000106012|ENST00000402050|IQCE'] 49510 21262 KFIDPIYQVW True PC9_epitope_Rep2 1307.69140933831 1307.6903099358601 87.244 2 0.17633922987970016 0.0005180580224985198 0.0016473327706005474 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 395 19015 AALDVLTHV True PC9_epitope_Rep5 937.5232813840499 937.52218993586 78.167 2 0.17633793793933972 0.0005180580224985198 0.0016473818491014244 ['nc|ENSG00000185825|P51572-2|BCAP31'] 118487 15926 TYPYLQHEI True PC9_epitope_Rep1 1162.5658744720201 1162.56476993586 66.069 2 0.1763363184290118 0.0005180580224985198 0.0016474433734670003 ['nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 104787 19887 SQYGEIVNI True PC9_epitope_Rep1 1021.5080252427299 1021.50692993586 81.314 2 0.17632960697960404 0.0005180580224985198 0.0016476983625098778 ['ENSG00000134597|ENST00000305536|RBMX2'] 140523 14348 YRNDYATML True PC9_epitope_Rep4 1145.51754438061 1145.51644993586 63.096 2 0.1763280844023016 0.0005180580224985198 0.0016477562155037414 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2', 'ENST00000460886.1_1_21:47532344-47532792:+|nuORF'] 8143 10513 ATELQSMM[Oxidation]Y True H1975_Epitope_Rep3 1088.45183327 1088.4507299358602 45.502 2 0.17632390042213508 0.0005180580224985198 0.0016479152036405354 ['ENSG00000196284|ENST00000371459|SUPT3H'] 134763 14368 VYTTMAEHF True PC9_epitope_Rep3 1097.48518162317 1097.48408993586 60.359 2 0.17630681391484745 0.0005180580224985198 0.001648564637700763 ['ENSG00000117472|ENST00000372003|TSPAN1'] 9322 4422 AVQRTLLEK True NCI_RA007_Epitope_Rep4 1056.6291434349198 1056.6280499358602 23.372 2 0.17629975429997552 0.0005180580224985198 0.001648833038529764 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 36029 14873 GTYTGFIKV True PC9_epitope_Rep6 984.5280324113198 984.52692993586 69.187 2 0.1762955879032979 0.0005180580224985198 0.0016489914620838268 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 138154 20437 YGLPVVVKL True PC9_epitope_Rep3 986.6164534929 986.61534993586 83.866 2 0.17629245794834486 0.0005180580224985198 0.0016491104858834251 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 1925 13545 AEILELAGNAA True H1975_Epitope_Rep2 1070.5607890915799 1070.5596899358602 57.238 2 0.17628788340484028 0.0005180580224985198 0.001649284458990253 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 45511 5566 IQNPTMINK True NCI_RA007_Epitope_Rep3 1057.55901526977 1057.5579099358602 28.887 2 0.1762819784441256 0.0005180580224985198 0.0016495090559736623 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2', 'SP2|p.P373Qfs*22|1|0.12|ENSG00000167182|chr17:47923015-47923015|C/-|frameshift_variant'] 9817 18438 AYLEAIHNF True PC9_epitope_Rep1 1076.52909504048 1076.5279899358602 75.713 2 0.17628057588835985 0.0005180580224985198 0.001649562407111607 ['ENSG00000042753|ENST00000263270|AP2S1'] 138471 18193 YHQDAFMQL True PC9_epitope_Rep5 1151.5069796969099 1151.50588993586 74.989 2 0.17627512080844043 0.0005180580224985198 0.0016497699266794868 ['ENSG00000170852|ENST00000304056|KBTBD2'] 130213 5883 VSESSDVLPK True H1975_Epitope_Rep3 1059.54480467427 1059.54370993586 27.638 2 0.17627162042624392 0.0005180580224985198 0.001649903100331553 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 105099 5006 SREESAGPAL True PC9_epitope_Rep2 1015.4934378077497 1015.49234993586 24.626 2 0.17626595597845965 0.0005180580224985198 0.0016501186296611228 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 21922 8603 ESDSRQIFY True H1975_Epitope_Rep3 1143.5196525555898 1143.5185499358602 38.083 2 0.17626579524920802 0.0005180580224985198 0.0016501247457379564 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 3989 14095 AHDVDPIEL True PC9_epitope_Rep4 1007.4923751785899 1007.49187496793 62.124 1 0.17625548075631411 0.0005180580224985198 0.0016505172807680072 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 40514 7642 HRDYETATL True PC9_epitope_Rep1 1104.51998690876 1104.5188899358602 34.218 2 0.17625199841224068 0.0005180580224985198 0.0016506498282251782 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 39483 16499 HLDLGILYY True H1975_Epitope_Rep2 1105.58079626017 1105.5796899358602 68.682 2 0.1762512554715302 0.0005180580224985198 0.0016506781079425774 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 53796 10824 KTDHFIFTY True H1975_Epitope_Rep2 1170.57095985246 1170.5698699358602 46.663 2 0.17625001638299306 0.0005180580224985198 0.0016507252743921863 ['ENSG00000116212|ENST00000371370|LRRC42'] 24017 21161 EYMLEKSFYQF True PC9_epitope_Rep3 1483.6693535643901 1483.66824993586 86.682 2 0.17624717605280044 0.0005180580224985198 0.00165083339790168 ['ENSG00000039123|ENST00000230640|MTREX'] 135442 10891 WHSDDEPSL True PC9_epitope_Rep4 1084.44615326216 1084.4450499358602 49.658 2 0.17624570494498856 0.0005180580224985198 0.0016508894016924443 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 40614 13500 HRIQDLEQL True PC9_epitope_Rep5 1150.6094706195 1150.60836993586 56.948 2 0.1762404417164759 0.0005180580224985198 0.0016510897837898086 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 104267 16101 SQIEADFRL True PC9_epitope_Rep6 1077.54547338061 1077.54436993586 74.268 2 0.17623296116024767 0.0005180580224985198 0.0016513746260916832 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 2419 10106 AEQFKLIQA True H1975_Epitope_Rep3 1046.5760452329 1046.57494993586 43.914 2 0.17623025149433183 0.0005180580224985198 0.001651477816051011 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 29386 15264 FVDPLVTNY True H1975_Epitope_Rep3 1066.53351171458 1066.5324099358602 64.121 2 0.1762284362683745 0.0005180580224985198 0.0016515469474070329 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 71206 19198 LYPDHFHLL True PC9_epitope_Rep5 1153.59202965021 1153.59092993586 78.884 2 0.17622799066757133 0.0005180580224985198 0.0016515639181823706 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 133699 18396 VYAVIPAEKF True PC9_epitope_Rep1 1135.62774645259 1135.62664993586 75.55 2 0.17622294452392465 0.0005180580224985198 0.001651756113528217 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 53978 10318 KVADGFKVV True PC9_epitope_Rep3 961.5596668927699 961.55856993586 44.634 2 0.17622012283052654 0.0005180580224985198 0.0016518635947345168 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 54407 10358 KYFLKPEVL True NCI_RA007_Epitope_Rep4 1135.6641319613097 1135.66302993586 46.698 2 0.17621972652033557 0.0005180580224985198 0.0016518786911585719 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 78362 13080 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.6069699358602 55.589 2 0.17621291303284622 0.0005180580224985198 0.0016521382551611915 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 74738 8528 NHANGLTL True PC9_epitope_Rep5 838.4297153523801 838.42860993586 37.745 2 0.17620470423275672 0.0005180580224985198 0.0016524510287025552 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 53420 9994 KQYGNEVFL True NCI_RA007_Epitope_Rep4 1096.5553097883198 1096.5542099358602 45.287 2 0.17619596956773997 0.0005180580224985198 0.001652783903981804 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 132923 15624 VVMQEGLAHI True PC9_epitope_Rep5 1095.5746653339097 1095.5735699358602 65.108 2 0.1761931568627553 0.0005180580224985198 0.0016528911095579726 ['ENSG00000152684|ENST00000274311|PELO'] 133679 21988 VYAPPVGGFSF True PC9_epitope_Rep5 1139.56514619603 1139.56404993586 89.605 2 0.17619038093274966 0.0005180580224985198 0.001652996920292057 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 118153 17059 TYIPVPAKI True PC9_epitope_Rep1 1000.5957180483199 1000.59462993586 70.443 2 0.17618839037356032 0.0005180580224985198 0.0016530727990499616 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 13997 18922 DRDSTFNVF True PC9_epitope_Rep2 1099.4934378077498 1099.4923499358601 78.148 2 0.17617826441314183 0.0005180580224985198 0.0016534588477556827 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 92367 18190 RLPETLPSL True PC9_epitope_Rep2 1024.59169529704 1024.5905899358602 75.275 2 0.17615877367189287 0.0005180580224985198 0.0016542021796097323 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 118372 20297 TYNPEIYVI True PC9_epitope_Rep4 1110.55972646242 1110.5586299358602 86.215 2 0.1761542891460331 0.0005180580224985198 0.0016543732564178349 ['ENSG00000164171|ENST00000296585|ITGA2'] 215 7790 AAFHQIEAV True NCI_RA007_Epitope_Rep3 984.5028802926398 984.50178993586 37.767 2 0.1761531308004918 0.0005180580224985198 0.001654417448150811 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'RABAC1|p.E178Rfs*?|1|0.15|ENSG00000105404|chr19:41956872-41956872|C/-|frameshift_variant'] 12742 9301 DLEGLSQR True PC9_epitope_Rep3 916.46140940348 916.46030993586 40.716 2 0.17615180642730383 0.0005180580224985198 0.0016544679754088014 ['ENSG00000100345|ENST00000216181|MYH9'] 37917 8798 GYSFTTTAER True PC9_epitope_Rep4 1131.51965255559 1131.5185499358602 41.36 2 0.17615034718196412 0.0005180580224985198 0.0016545236500752573 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 142812 16847 YYSPHGHILVL True PC9_epitope_Rep1 1297.68190728377 1297.68080993586 69.627 2 0.17614253071916688 0.0005180580224985198 0.0016548219039446096 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 54592 20079 KYITQGQLLQF True PC9_epitope_Rep3 1337.73433677945 1337.7332299358602 82.485 2 0.1761208823722297 0.0005180580224985198 0.0016556482240360829 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 34661 13654 GQDEPLIHV True PC9_epitope_Rep2 1006.5083595958998 1006.50726993586 57.812 2 0.17610675569566994 0.0005180580224985198 0.001656187663806304 ['ENSG00000157778|ENST00000288607|PSMG3'] 3907 10245 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47734993586 44.289 2 0.17610630639655703 0.0005180580224985198 0.0016562048235820674 ['ENSG00000075618|ENST00000382361|FSCN1'] 69713 9220 LVEIADTVPK True H1975_Epitope_Rep3 1083.6175756917098 1083.61646993586 40.457 2 0.17610132580118693 0.0005180580224985198 0.00165639505600327 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENSG00000137040|ENST00000259569|RANBP6'] 104314 12006 SQIPAQPSV True PC9_epitope_Rep5 925.48689587533 925.48578993586 51.175 2 0.17610081490014814 0.0005180580224985198 0.0016564145709601827 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 52705 8931 KMDDLNLHY True H1975_Epitope_Rep2 1147.53319444475 1147.53154490379 39.312 3 0.17609909377947894 0.0005180580224985198 0.0016564803145362353 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 77638 8528 NTFSVVPSPK True H1975_Epitope_Rep3 1074.5709598524597 1074.5698699358602 37.789 2 0.17609056367826312 0.0005180580224985198 0.0016568061869456083 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 95946 10179 RYLEKPMEI True PC9_epitope_Rep6 1177.6165301458898 1177.6154299358602 49.787 2 0.17608384688508993 0.0005180580224985198 0.0016570628313712686 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 77930 6279 NVKVDPEIQ True H1975_Epitope_Rep2 1040.5502244078798 1040.54912993586 29.095 2 0.17607735407255157 0.0005180580224985198 0.0016573109554787325 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 61400 12470 LITPAVVSER True PC9_epitope_Rep2 1083.62880908175 1083.6277099358601 53.276 2 0.17607527586167812 0.0005180580224985198 0.0016573903825754864 ['ENSG00000118181|ENST00000527673|RPS25'] 24250 13961 EYSRFVNQI True PC9_epitope_Rep2 1154.5720224816198 1154.57092993586 58.976 2 0.17607511737165993 0.0005180580224985198 0.0016573964400585213 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF'] 14610 11743 DVAASEFFR True H1975_Epitope_Rep3 1040.4927095317598 1040.4916099358602 50.312 2 0.17607289465603682 0.0005180580224985198 0.0016574813945086967 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'ENO1|p.S254Y|1|0.15|ENSG00000074800|chr1:8865389-8865389|G/T|missense_variant'] 47950 23703 IYIPSYFDF True PC9_epitope_Rep1 1163.55391280599 1163.55280993586 95.969 2 0.17607150926417664 0.0005180580224985198 0.0016575343477995743 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 34165 12417 GNFNYIEFTR True NCI_RA007_Epitope_Rep5 1259.5934862021898 1259.5923899358602 54.419 2 0.17606185398116764 0.0005180580224985198 0.0016579034449517166 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 71081 22377 LYLEPQGTLF True PC9_epitope_Rep1 1179.6175756917098 1179.61646993586 90.889 2 0.17605413449003515 0.0005180580224985198 0.0016581986008603307 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 96023 18257 RYLPKGFLNQF True PC9_epitope_Rep4 1381.7506555499297 1381.7490149037899 78.297 3 0.17604056500777934 0.0005180580224985198 0.001658717559608865 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 90923 11182 REYQDLLNV True NCI_RA007_Epitope_Rep3 1148.5825871653199 1148.5814899358602 51.093 2 0.17603735474270027 0.0005180580224985198 0.0016588403585415927 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 75759 18933 NLLPKLHIV True PC9_epitope_Rep5 1045.66480066765 1045.6637099358602 77.849 2 0.1760360242726924 0.0005180580224985198 0.0016588912542958951 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 26675 17914 FISPFGHGL True PC9_epitope_Rep6 973.5021520166499 973.50104993586 81.531 2 0.17603145588588917 0.0005180580224985198 0.0016590660251117517 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5', 'ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF'] 14746 13344 DVNAAIATIK True PC9_epitope_Rep2 1014.57095985246 1014.56986993586 56.601 2 0.17602273687051295 0.0005180580224985198 0.0016593996359233088 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 10066 9367 AYSSYVHQY True PC9_epitope_Rep4 1116.48762415132 1116.48652993586 43.639 2 0.1760167152220376 0.0005180580224985198 0.0016596300781092897 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 115581 7070 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 34.459 2 0.17601631506874263 0.0005180580224985198 0.0016596453926926123 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 29464 14281 FVEPSRQFV True PC9_epitope_Rep5 1107.5712942056298 1107.57018993586 59.935 2 0.17601373920184823 0.0005180580224985198 0.0016597439791198126 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 110613 17158 TFTFSHATF True PC9_epitope_Rep4 1057.4868958753298 1057.48578993586 74.004 2 0.17600655650424818 0.0005180580224985198 0.0016600189142436535 ['ENSG00000204713|ENST00000377199|TRIM27'] 27281 20319 FLQPELVKL True PC9_epitope_Rep1 1085.6484818971699 1085.64738993586 82.986 2 0.17600509295817504 0.0005180580224985198 0.0016600749406022477 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 96173 7517 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.55560993586 36.692 2 0.17600380991505715 0.0005180580224985198 0.0016601240586414726 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 8125 8862 ATEESDLAQQY True H1975_Epitope_Rep2 1253.54117584581 1253.5400699358602 39.055 2 0.17599753851759217 0.0005180580224985198 0.0016603641640687463 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 33639 11431 GLGLDDALEPR True H1975_Epitope_Rep3 1154.59315184902 1154.5920499358601 49.087 2 0.1759966463628829 0.0005180580224985198 0.0016603983237447502 ['ENSG00000183207|ENST00000595090|RUVBL2', 'ENST00000594017.5_1_19:49497156-49513425:+|nuORF'] 76397 12786 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52838993586 54.484 2 0.17597328663115183 0.0005180580224985198 0.0016612929940704715 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 60895 13854 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 58.369 2 0.1759713297277446 0.0005180580224985198 0.00166136796476105 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 107186 14010 SVINEINKI True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 65.743 2 0.17597046852453307 0.0005180580224985198 0.0016614009592870256 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 96318 21773 RYSIAFPLL True PC9_epitope_Rep3 1078.61751612206 1078.61640993586 89.047 2 0.1759672332327757 0.0005180580224985198 0.001661524916055293 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 22396 10837 ETEGPHVLLY True H1975_Epitope_Rep1 1156.5764391557198 1156.57534993586 46.646 2 0.1759624643016273 0.0005180580224985198 0.0016617076494749613 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'CON__P01030'] 138461 8970 YHNPTANSF True PC9_epitope_Rep5 1049.45665837621 1049.45556993586 39.446 2 0.17596176023413992 0.0005180580224985198 0.0016617346292709927 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 124780 9455 VHDPAGALQAA True PC9_epitope_Rep5 1048.5301576696397 1048.5290699358602 41.325 2 0.17595636657813657 0.0005180580224985198 0.0016619413281840426 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 21747 7629 ERTQENVTL True PC9_epitope_Rep5 1088.5462016565998 1088.5451099358602 34.291 2 0.17595515086295088 0.0005180580224985198 0.0016619879211042664 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 78263 18426 NYIDKVRFL True PC9_epitope_Rep5 1166.64479349906 1166.64313490379 75.896 3 0.17595384100799613 0.0005180580224985198 0.0016620381234442331 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 113575 21654 TLVDEVFRI True PC9_epitope_Rep3 1090.60225998074 1090.60116993586 88.592 2 0.17594940254031813 0.0005180580224985198 0.0016622082462899132 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 41112 11395 HTVEDLVKV True PC9_epitope_Rep4 1038.5709598524597 1038.5698699358602 51.601 2 0.17594770854819985 0.0005180580224985198 0.0016622731802234364 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 3877 12835 AGYTDNLVRV True PC9_epitope_Rep6 1106.57202248162 1106.57092993586 60.88 2 0.17594366483873247 0.0005180580224985198 0.0016624281935520852 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 54701 22813 KYLVIGDLLF True PC9_epitope_Rep5 1179.69034670915 1179.68924993586 92.743 2 0.17594059657445704 0.0005180580224985198 0.0016625458233963668 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 64786 20389 LQAPPLTSL True PC9_epitope_Rep3 938.5436824754601 938.54258993586 83.677 2 0.1759403638357853 0.0005180580224985198 0.001662554746375187 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 21307 19284 EREPLIIAM True PC9_epitope_Rep5 1070.5794163611797 1070.57830993586 79.219 2 0.1759367322371534 0.0005180580224985198 0.0016626939846172183 ['ENSG00000133704|ENST00000256079|IPO8'] 105861 8593 SSMSAQLLYK True NCI_RA007_Epitope_Rep3 1126.5692456003 1126.5681499358602 40.871 2 0.1759345225507064 0.0005180580224985198 0.001662778711383113 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000570934.5_1_17:4098183-4145738:-|nuORF'] 54891 16123 KYPLNLYLL True NCI_RA007_Epitope_Rep5 1135.66413196131 1135.66302993586 68.749 2 0.17592704305774803 0.0005180580224985198 0.001663065532233815 ['ENSG00000155957|ENST00000358230|TMBIM4'] 115837 18982 TSDTQWGWFY True H1975_Epitope_Rep2 1289.53530261973 1289.5342099358602 78.796 2 0.1759263284082414 0.0005180580224985198 0.0016630929399436144 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11'] 109831 5816 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 27.362 2 0.17592232867970392 0.0005180580224985198 0.001663246342926675 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 127420 20553 VNFEFPEFQL True H1975_Epitope_Rep1 1268.6077392839998 1268.60664993586 85.469 2 0.17592192958090686 0.0005180580224985198 0.0016632616504793907 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 44088 19394 IIMLEALERV True PC9_epitope_Rep6 1185.67913040245 1185.6780299358602 87.251 2 0.17592137581926381 0.0005180580224985198 0.0016632828904051032 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 103874 9835 SPYSGPKFNSA True PC9_epitope_Rep1 1153.54038800017 1153.53928993586 42.692 2 0.175920998045892 0.0005180580224985198 0.0016632973803300626 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 118262 15894 TYLEKFQNL True PC9_epitope_Rep6 1154.5971746002997 1154.5960699358602 73.416 2 0.17590879581267121 0.0005180580224985198 0.0016637654787725466 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 40639 7920 HRNEVTVEL True PC9_epitope_Rep2 1095.56727145435 1095.5661699358602 35.83 2 0.1759048459379654 0.0005180580224985198 0.0016639170309511277 ['ENSG00000102753|ENST00000261667|KPNA3'] 129695 10214 VRPPVQVY True PC9_epitope_Rep4 956.5443511817998 956.54324993586 46.965 2 0.1759020078583666 0.0005180580224985198 0.0016640259333565478 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 95634 14758 RYAVEILTW True NCI_RA007_Epitope_Rep3 1149.61824439805 1149.6171499358602 65.465 2 0.1759006201351701 0.0005180580224985198 0.0016640791854809192 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 29430 6054 FVEAGAM[Oxidation]AVR True NCI_RA007_Epitope_Rep2 1065.5277155219298 1065.52660993586 28.153 2 0.17589813182443673 0.0005180580224985198 0.0016641746755347532 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000414406.2_1_12:20095069-20095366:+|nuORF'] 83320 14893 PTDYADIMM[Oxidation]GY True H1975_Epitope_Rep3 1291.51007642211 1291.50896993586 62.671 2 0.1758951475167012 0.0005180580224985198 0.0016642892069351676 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 35881 6220 GTMTGM[Oxidation]LYK True NCI_RA007_Epitope_Rep4 1016.46708941132 1016.46598993586 30.533 2 0.17589103898292793 0.0005180580224985198 0.0016644468966591722 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 109690 5854 TEDDGRPIYA True H1975_Epitope_Rep2 1135.51456717515 1135.51346993586 27.506 2 0.17587738949402387 0.0005180580224985198 0.001664970885413253 ['ENSG00000169189|ENST00000361439|NSMCE1', 'ENST00000569236.5_1_16:27236480-27252833:-|nuORF', 'ENST00000565070.5_1_16:27237776-27268891:-|nuORF'] 4722 6071 ALDDYEHHY True H1975_Epitope_Rep2 1161.4727023631701 1161.4710449037902 28.329 3 0.17587492729655482 0.0005180580224985198 0.0016650654240298825 ['ENST00000482153.1_1_10:135122453-135123793:+|nuORF', 'ENSG00000198546|ENST00000361518|ZNF511', 'nc|ENSG00000198546|Q8NB15-1|ZNF511'] 17419 5833 EHDPVGQM[Oxidation]V True PC9_epitope_Rep5 1026.4440454676198 1026.44294993586 27.429 2 0.175872487004418 0.0005180580224985198 0.0016651591268723213 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 85885 21209 QHFDTIYSIL True PC9_epitope_Rep3 1235.6186383208699 1235.61754993586 86.87 2 0.1758723609329259 0.0005180580224985198 0.0016651639679350046 ['ENSG00000010292|ENST00000315579|NCAPD2'] 137526 6553 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 30.173 2 0.17586939112320416 0.0005180580224985198 0.0016652780107585087 ['ENSG00000127184|ENST00000247655|COX7C'] 24005 11783 EYMKHTRLF True PC9_epitope_Rep3 1223.6121134717898 1223.61046490379 50.34 3 0.17586606760463847 0.0005180580224985198 0.001665405645529054 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 95932 13099 RYLEKPMEI True PC9_epitope_Rep1 1177.6165301458898 1177.6154299358602 55.254 2 0.17586446758910654 0.0005180580224985198 0.0016654670952307494 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 26694 21533 FIVDPVSNL True PC9_epitope_Rep5 1002.53859709502 1002.53750993586 87.863 2 0.17585477613629172 0.0005180580224985198 0.0016658393506980825 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 100890 6228 SLETENAGLR True NCI_RA007_Epitope_Rep1 1088.5462016566 1088.5451099358602 28.258 2 0.17585445382816894 0.0005180580224985198 0.0016658517322094405 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 52546 20341 KLFPGFEIETV True PC9_epitope_Rep4 1278.6859896047 1278.6848899358602 86.386 2 0.17585129513576236 0.0005180580224985198 0.0016659730786944059 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 8370 19282 ATLNDGVVVQV True PC9_epitope_Rep1 1113.60298825673 1113.60188993586 78.97 2 0.17584581739820082 0.0005180580224985198 0.0016661835361864974 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000413279.1_1_2:136269117-136269381:-|nuORF'] 35644 13192 GTDLSIFKY True H1975_Epitope_Rep2 1042.53351171458 1042.5324099358602 55.868 2 0.17584305420648216 0.0005180580224985198 0.0016662897095338605 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 11728 6323 DHASIQM[Oxidation]NV True PC9_epitope_Rep1 1029.45494450449 1029.45384993586 29.134 2 0.17583372924533078 0.0005180580224985198 0.001666648063434149 ['ENSG00000171858|ENST00000343986|RPS21'] 24859 17834 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.49657496793 73.393 1 0.1758310758579666 0.0005180580224985198 0.001666750045973662 ['ENSG00000204592|ENST00000376630|HLA-E'] 31679 10247 GEFSITYKP True NCI_RA007_Epitope_Rep4 1040.5178616504397 1040.51676993586 46.269 2 0.1758268398353796 0.0005180580224985198 0.0016669128698080689 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 120837 10881 VELQELNDR True PC9_epitope_Rep1 1114.5618517207397 1114.56074993586 46.738 2 0.17582140671722718 0.0005180580224985198 0.0016671217308035276 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 113765 19133 TMLGKFYHF True PC9_epitope_Rep1 1142.55828699378 1142.5566449037901 78.387 3 0.17582077930481838 0.0005180580224985198 0.0016671458516023352 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 11756 14493 DHDGNIVEL True PC9_epitope_Rep2 1010.46688870674 1010.46578993586 61.017 2 0.17581949481188452 0.0005180580224985198 0.0016671952348773973 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 104164 22388 SQFLGYPITL True PC9_epitope_Rep3 1137.60701100801 1137.6059099358602 91.393 2 0.17581892519796527 0.0005180580224985198 0.0016672171345720394 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 68535 12021 LTGHLEEVVL True NCI_RA007_Epitope_Rep1 1108.61282466444 1108.61172993586 50.746 2 0.17581356238905693 0.0005180580224985198 0.0016674233302390383 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 115198 18013 TRDQFLDTL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 74.303 2 0.1758117931556456 0.0005180580224985198 0.001667491361435064 ['ENSG00000010292|ENST00000315579|NCAPD2'] 59020 14766 LEVNLQAMK True PC9_epitope_Rep5 1044.5637662970398 1044.5626699358602 61.796 2 0.17581098292888503 0.0005180580224985198 0.001667522517492156 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 89328 21014 QWPPDPPLHF True PC9_epitope_Rep2 1232.59784330664 1232.59674993586 86.283 2 0.17581040627050937 0.0005180580224985198 0.0016675446923817506 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 117163 17598 TVLEEIGNRV True PC9_epitope_Rep3 1128.6138872935999 1128.61278993586 72.878 2 0.1758095436612331 0.0005180580224985198 0.0016675778638124172 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 14772 8996 DVNQQEFVR True PC9_epitope_Rep2 1133.5465360097699 1133.54542993586 39.955 2 0.17580742058481028 0.0005180580224985198 0.0016676595090161293 ['ENSG00000105372|ENST00000598742|RPS19'] 4062 13720 AHLDATTVL True PC9_epitope_Rep3 939.5025459394701 939.50144993586 57.856 2 0.1758020874313643 0.0005180580224985198 0.0016678646188657508 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 48015 14372 IYLLIHNNF True NCI_RA007_Epitope_Rep1 1145.62332977849 1145.62222993586 59.944 2 0.17579721656900105 0.0005180580224985198 0.00166805197135146 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 53665 8566 KSDLQPPNYY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 37.902 2 0.17579410897047298 0.0005180580224985198 0.0016681715128000197 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 108506 12045 SYM[Oxidation]GHFDLL True NCI_RA007_Epitope_Rep3 1097.48518200361 1097.48408993586 54.501 2 0.1757924938503864 0.0005180580224985198 0.0016682336457689094 ['ENSG00000169976|ENST00000367569|SF3B5'] 121703 11909 VFLENVIR True NCI_RA007_Epitope_Rep5 988.5705659296399 988.56946993586 52.466 2 0.17579046152345862 0.0005180580224985198 0.001668311831796442 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 128425 8843 VPRQPTVTSV True PC9_epitope_Rep5 1082.60840799034 1082.60730993586 38.958 2 0.17579031786802748 0.0005180580224985198 0.0016683173585301204 ['ENSG00000163110|ENST00000317968|PDLIM5'] 54318 20244 KYDEIFYNL True PC9_epitope_Rep2 1203.5811901829898 1203.58008993586 83.288 2 0.17578977649214578 0.0005180580224985198 0.0016683381865904181 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 23702 11575 EYEALLNIK True H1975_Epitope_Rep1 1091.58627556343 1091.5851699358602 49.511 2 0.17578244652401806 0.0005180580224985198 0.0016686202141032302 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000397031.2_1_2:182825941-182826409:-|nuORF'] 43977 17485 IIEPSLRQLA True PC9_epitope_Rep1 1138.6710082468999 1138.66990993586 72.051 2 0.17576571369267627 0.0005180580224985198 0.0016692642046350038 ['ENSG00000221983|ENST00000442744|UBA52'] 78645 19913 NYTLVSHLI True PC9_epitope_Rep3 1058.5760452329 1058.57494993586 81.836 2 0.17576251717349795 0.0005180580224985198 0.0016693872562419934 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 114712 13071 TQIDHYVGI True PC9_epitope_Rep6 1044.52400966004 1044.52290993586 61.884 2 0.1757611825761754 0.0005180580224985198 0.00166943863492222 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 40191 11684 HQFESSFEL True NCI_RA007_Epitope_Rep5 1122.4981888350198 1122.49708993586 51.595 2 0.17575711366489166 0.0005180580224985198 0.0016695952876674984 ['ENSG00000197442|ENST00000359015|MAP3K5'] 115268 14530 TREGGSIPVTL True PC9_epitope_Rep3 1128.6138872935999 1128.61278993586 61.011 2 0.17575459905364674 0.0005180580224985198 0.0016696921073498362 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 8196 6443 ATFGTQVVEK True NCI_RA007_Epitope_Rep5 1078.56587447202 1078.56476993586 31.451 2 0.1757544907028898 0.0005180580224985198 0.0016696962792883752 ['ENSG00000125730|ENST00000245907|C3'] 41600 4592 IADGYEQAAR True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 22.784 2 0.175744610029046 0.0005180580224985198 0.0016700767687242385 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 17127 5705 EGM[Oxidation]NIVEAM[Oxidation]ER True NCI_RA007_Epitope_Rep2 1309.5642376337298 1309.5631299358602 26.806 2 0.17573146775206264 0.0005180580224985198 0.0016705829919852417 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 37847 21359 GYLPNQLFRTF True PC9_epitope_Rep5 1354.70337100434 1354.7022699358602 87.216 2 0.17572711027174395 0.0005180580224985198 0.0016707508703229924 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 108785 13691 SYTHIQYLF True NCI_RA007_Epitope_Rep4 1170.5709598524602 1170.5698699358602 59.888 2 0.17572705137134828 0.0005180580224985198 0.001670753139663068 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 88041 13187 QRQDIAFAY True PC9_epitope_Rep4 1110.5458077337798 1110.54470993586 58.621 2 0.17572340610443363 0.0005180580224985198 0.0016708935920995982 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 74008 12766 NDEELNKLLGK True PC9_epitope_Rep4 1271.6721304457099 1271.67049490379 56.968 3 0.17572248825985382 0.0005180580224985198 0.001670928958590548 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 44160 7884 IITEGFEAAK True H1975_Epitope_Rep1 1077.57062549929 1077.5695299358601 35.278 2 0.17572232290782505 0.0005180580224985198 0.0016709353300332656 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 59014 10036 LEVNLQAM[Oxidation]K True PC9_epitope_Rep1 1060.5586812970398 1060.55758993586 43.471 2 0.17571998239197711 0.0005180580224985198 0.001671025518791232 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 108412 13931 SYLNSVQRL True PC9_epitope_Rep2 1078.5771078620598 1078.5760099358602 58.864 2 0.17571820095806975 0.0005180580224985198 0.001671094167314968 ['nc|ENSG00000136243|O15504-2|NUP42', 'ENSG00000136243|ENST00000258742|NUP42'] 41426 11493 HYILHNSFF True NCI_RA007_Epitope_Rep1 1176.5716285587998 1176.5705299358601 48.67 2 0.17571379807218984 0.0005180580224985198 0.0016712638470300321 ['ENSG00000163659|ENST00000295924|TIPARP'] 163 13107 AADPVSPLL True NCI_RA007_Epitope_Rep3 881.4858332461699 881.48528496793 58.838 1 0.1757122290624774 0.0005180580224985198 0.0016713243181584769 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 43809 10483 IHSENFQTL True PC9_epitope_Rep4 1087.5298233164701 1087.5287299358602 48.039 2 0.1757108906490049 0.0005180580224985198 0.001671375903619816 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 2643 5146 AESIQDNAHMA True H1975_Epitope_Rep2 1185.5084362488901 1185.50732993586 24.872 2 0.17569733250223388 0.0005180580224985198 0.0016718985549324663 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 24281 12558 EYTLMRATF True NCI_RA007_Epitope_Rep5 1130.5430308524599 1130.54192993586 54.959 2 0.17569417484324792 0.0005180580224985198 0.0016720203026293634 ['ENSG00000185950|ENST00000375856|IRS2'] 13426 8353 DM[Oxidation]GFEPQIR True H1975_Epitope_Rep1 1107.5018946969099 1107.5007899358602 37.059 2 0.17568942950157154 0.0005180580224985198 0.0016722032822164342 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y', 'DDX3X|p.V422Kfs*13|1|0.5|ENSG00000215301|chrX:41345494-41345497|TGGG/-|frameshift_variant', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 140035 17813 YQEVEIASV True PC9_epitope_Rep1 1036.5076908895599 1036.5065899358601 73.313 2 0.17568521686630623 0.0005180580224985198 0.0016723657375336493 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 65873 13235 LSDMPLKSFY True H1975_Epitope_Rep2 1199.58964669171 1199.58854993586 56.038 2 0.17568172587374423 0.0005180580224985198 0.0016725003755244036 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 75286 20131 NIIPRFVQV True PC9_epitope_Rep5 1084.6393141958001 1084.63820993586 82.481 2 0.1756789976042191 0.0005180580224985198 0.0016726056049390261 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 52577 21149 KLILLITQV True PC9_epitope_Rep1 1039.7005174700298 1039.69942993586 86.182 2 0.17567229338378007 0.0005180580224985198 0.001672864215028368 ['ENSG00000163811|ENST00000407426|WDR43'] 85824 13211 QHEEFVTSL True PC9_epitope_Rep4 1088.51383889916 1088.51274993586 58.714 2 0.1756699027484803 0.0005180580224985198 0.001672956441609364 ['ENSG00000085872|ENST00000546361|CHERP'] 76146 19888 NMVDIIHSV True PC9_epitope_Rep5 1026.51681610462 1026.51570993586 81.551 2 0.17566210080354389 0.0005180580224985198 0.001673257462592044 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 101330 20108 SLIRNLEQL True PC9_epitope_Rep1 1084.62405805448 1084.62296993586 82.175 2 0.17565867708135738 0.0005180580224985198 0.0016733895765464032 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 35658 8228 GTDTGVVQY True H1975_Epitope_Rep3 938.4345259493 938.43342993586 36.632 2 0.17563712601292428 0.0005180580224985198 0.001674221424995691 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF', 'WDR19|p.H891Tfs*26|1|0.25|ENSG00000157796|chr4:39245391-39245391|C/-|frameshift_variant'] 21442 13349 ERISLQQEL True PC9_epitope_Rep4 1114.59823722946 1114.5971499358602 59.248 2 0.17562904144192817 0.0005180580224985198 0.0016745335876730903 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 132244 15132 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 70.27 2 0.17562355916286787 0.0005180580224985198 0.0016747453034201324 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 8787 11958 AVDPRFLAY True H1975_Epitope_Rep1 1050.5498304850598 1050.5487299358601 51.002 2 0.17562289384584875 0.0005180580224985198 0.0016747709985892425 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 120778 15055 VELDNMPLR True PC9_epitope_Rep1 1085.5539298893298 1085.55282993586 62.726 2 0.1756226437089793 0.0005180580224985198 0.0016747806592125397 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 75723 19382 NLLAHFINA True PC9_epitope_Rep4 1011.55016483823 1011.54906993586 82.662 2 0.175616089435346 0.0005180580224985198 0.0016750338139881757 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 78617 18973 NYSPYVNYF True PC9_epitope_Rep6 1165.50802524273 1165.5069299358602 85.624 2 0.17561541074697268 0.0005180580224985198 0.0016750600300970196 ['ENSG00000156162|ENST00000414645|DPY19L4'] 27917 19207 FQEEDFPAL True PC9_epitope_Rep6 1094.4920408254197 1094.49094993586 86.532 2 0.17561002350530322 0.0005180580224985198 0.001675268140933972 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 34664 14088 GQDEPLIHV True PC9_epitope_Rep5 1006.5083595958998 1006.50726993586 59.2 2 0.17560737743662638 0.0005180580224985198 0.0016753703688785582 ['ENSG00000157778|ENST00000288607|PSMG3'] 21135 6620 ERAPGETAL True PC9_epitope_Rep5 942.4770594676199 942.47596993586 30.437 2 0.17560488254434867 0.0005180580224985198 0.001675466762010889 ['ENSG00000092148|ENST00000399332|HECTD1'] 54915 10931 KYPSDLPYM True NCI_RA007_Epitope_Rep3 1112.5212327787199 1112.52012993586 50.081 2 0.17559903734333812 0.0005180580224985198 0.0016756926200551415 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG'] 2199 5421 AEMAEEAQQQA True H1975_Epitope_Rep3 1204.50301651528 1204.50190993586 25.911 2 0.17559889306460205 0.0005180580224985198 0.0016756981953581177 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 44532 11758 ILMEHIHKL True PC9_epitope_Rep5 1132.64268532408 1132.64104490379 50.225 3 0.17559239316852843 0.0005180580224985198 0.0016759493873972858 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 105607 9387 SSDPASQLSY True H1975_Epitope_Rep1 1053.46146897313 1053.4608749679298 41.019 1 0.17556734434657692 0.0005180580224985198 0.0016769177654939896 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 109701 6804 TEDFSNPSA True H1975_Epitope_Rep3 966.3930550601399 966.3925049679301 31.124 1 0.17556488613082974 0.0005180580224985198 0.0016770128293802661 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 4457 13145 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 55.427 2 0.17556260910593388 0.0005180580224985198 0.0016771008910853047 ['ENSG00000181789|ENST00000314797|COPG1'] 7552 7214 ASEFPGAQHY True H1975_Epitope_Rep3 1105.48287312405 1105.48176993586 32.72 2 0.17556028958902062 0.0005180580224985198 0.001677190600888085 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 37851 21054 GYMEGYYTF True PC9_epitope_Rep2 1129.44264810485 1129.4415499358602 86.438 2 0.1755566814782106 0.0005180580224985198 0.001677330157991455 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 88975 8831 QVIGVVLQK True NCI_RA007_Epitope_Rep4 982.6175161220598 982.61640993586 40.778 2 0.17555043015101904 0.0005180580224985198 0.0016775719788430024 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 17524 16464 EHGDQDYIW True PC9_epitope_Rep1 1161.47270236317 1161.4716099358602 68.154 2 0.17554484961802133 0.0005180580224985198 0.0016777878807716338 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 54319 20581 KYDEIFYNL True PC9_epitope_Rep3 1203.5811901829898 1203.58008993586 84.431 2 0.17554194326349123 0.0005180580224985198 0.001677900334014849 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 45854 8641 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.43850993586 38.196 2 0.17553985806343728 0.0005180580224985198 0.0016779810196366522 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 134628 16219 VYSPHVLNL True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 70.329 2 0.17553349111876876 0.0005180580224985198 0.0016782274089562354 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 122394 7613 VGDPHTVTV True PC9_epitope_Rep5 923.47124581119 923.47014993586 34.231 2 0.17553154837651203 0.0005180580224985198 0.0016783025968040988 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 38151 10673 HDDYLVM[Oxidation]LK True PC9_epitope_Rep4 1148.5535959166 1148.5524899358602 48.8 2 0.17553084267388688 0.0005180580224985198 0.0016783299096830332 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 8175 9396 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51227496793 41.106 1 0.17552703072272494 0.0005180580224985198 0.0016784774517035015 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 55047 14283 KYSPFVVSF True NCI_RA007_Epitope_Rep5 1072.5593325396 1072.55822993586 61.633 2 0.17552109762791399 0.0005180580224985198 0.0016787071186779832 ['ENSG00000086544|ENST00000263370|ITPKC'] 266 13295 AAGGVGSIVRV True PC9_epitope_Rep5 984.5716285588 984.57052993586 56.151 2 0.1755196151628719 0.0005180580224985198 0.0016787645090319712 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 9400 7533 AVTDAIMSR True NCI_RA007_Epitope_Rep4 962.48551597634 962.48440993586 35.621 2 0.17551421564513509 0.0005180580224985198 0.0016789735560232457 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64897669-64899838:-|nuORF'] 27493 21164 FMFDEKLVTV True PC9_epitope_Rep1 1227.62094681999 1227.6198499358602 86.24 2 0.17551210376751886 0.0005180580224985198 0.0016790553262794484 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 65783 10938 LSDGVAVLK True PC9_epitope_Rep3 900.5280324113199 900.52692993586 47.056 2 0.1755091718130672 0.0005180580224985198 0.0016791688558827993 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 21574 5542 ERQPGAASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 26.147 2 0.17550734162027826 0.0005180580224985198 0.0016792397275450033 ['ENSG00000180921|ENST00000388913|FAM83H'] 76407 13380 NQDDSILKV True PC9_epitope_Rep5 1030.5294889632999 1030.52897496793 56.483 1 0.17550565155984219 0.0005180580224985198 0.00167930517543725 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 136874 7856 YADYSGQQSTY True H1975_Epitope_Rep3 1281.51496109797 1281.5138699358602 35.194 2 0.1755038376429342 0.0005180580224985198 0.0016793754225352259 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 40750 18380 HRTEMDWVL True PC9_epitope_Rep1 1185.5600778989299 1185.55843490379 75.489 3 0.17550225489213173 0.0005180580224985198 0.0016794367197260679 ['ENSG00000169813|ENST00000682386|HNRNPF'] 77081 9758 NRLENDGATAL True PC9_epitope_Rep5 1172.5785644140399 1172.57746993586 42.504 2 0.1755021273145118 0.0005180580224985198 0.0016794416606833685 ['ENSG00000100401|ENST00000356244|RANGAP1'] 54843 16649 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 70.806 2 0.1755008796406484 0.0005180580224985198 0.0016794899826474458 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 28395 15429 FRYPTTEEL True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 64.625 2 0.17549838401777815 0.0005180580224985198 0.0016795866414090496 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 10173 16969 AYVPGFAHI True PC9_epitope_Rep4 973.5021520166499 973.50104993586 73.262 2 0.17549784997364273 0.0005180580224985198 0.0016796073263654926 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF'] 33518 7622 GLDSANEKGLY True H1975_Epitope_Rep3 1165.5615173675699 1165.5604299358602 34.299 2 0.1754963029512789 0.0005180580224985198 0.0016796672481153019 ['ENSG00000096060|ENST00000357266|FKBP5'] 139125 21316 YLDPSVLSGV True PC9_epitope_Rep5 1048.54407639828 1048.5429699358601 87.046 2 0.17549566533929883 0.0005180580224985198 0.001679691945747413 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 47980 12698 IYKDYQYYF True NCI_RA007_Epitope_Rep5 1301.59684024713 1301.59574993586 55.503 2 0.175494522698308 0.0005180580224985198 0.0016797362063757342 ['ENSG00000260314|ENST00000569591|MRC1'] 135417 16454 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.5550749037902 68.288 3 0.17548312969871352 0.0005180580224985198 0.001680177582373359 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 56946 7352 LDQPM[Oxidation]TEIVSR True NCI_RA007_Epitope_Rep2 1303.64420182615 1303.6431099358601 33.22 2 0.17547796070704208 0.0005180580224985198 0.001680377872482772 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 37872 21198 GYPLWKVTF True PC9_epitope_Rep5 1109.59096702105 1109.5898699358602 86.585 2 0.17547051469996502 0.0005180580224985198 0.0016806664352991818 ['ENSG00000198805|ENST00000361505|PNP'] 111208 13620 THISDTSVVL True PC9_epitope_Rep5 1070.56078909158 1070.5596899358602 57.412 2 0.17546848896530193 0.0005180580224985198 0.001680744949275728 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 132759 10069 VVINYSIVK True NCI_RA007_Epitope_Rep4 1033.6171817688898 1033.6160899358601 45.575 2 0.17546761873114128 0.0005180580224985198 0.0016807786791763822 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 77495 5751 NTDEM[Oxidation]VELR True NCI_RA007_Epitope_Rep1 1121.5022886197298 1121.50118993586 26.426 2 0.1754673540478225 0.0005180580224985198 0.0016807889383220606 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000483135.1_1_9:86591819-86593167:-|nuORF'] 48255 13512 IYQKYIARF True PC9_epitope_Rep5 1200.6655289436396 1200.6638849037902 56.993 3 0.17546674346622423 0.0005180580224985198 0.0016808126047506498 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 11993 5542 DHQQNSPTL True PC9_epitope_Rep3 1038.47303671634 1038.47192993586 26.397 2 0.17546413840850855 0.0005180580224985198 0.0016809135817559906 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.E121Q|1|0.18|ENSG00000173614|chr1:9981092-9981092|G/C|missense_variant'] 103227 19930 SPLDMKDGFLA True PC9_epitope_Rep2 1192.579810284 1192.5787099358602 82.058 2 0.17545737101747713 0.0005180580224985198 0.001681175927125093 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 49201 4538 KEMPTVAQA True NCI_RA007_Epitope_Rep3 973.4902670036098 973.48916993586 24.719 2 0.17545212002650018 0.0005180580224985198 0.001681379515822186 ['RASL12|p.K239N|1|0.28|ENSG00000103710|chr15:65054983-65054983|C/A|missense_variant', 'nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 104254 10594 SQIDPSSIERA True PC9_epitope_Rep4 1201.5938801250102 1201.59278993586 48.491 2 0.1754506612049639 0.0005180580224985198 0.0016814360808753788 ['ENSG00000100393|ENST00000263253|EP300'] 126005 19854 VLDSEGYLLFY True H1975_Epitope_Rep1 1317.6492697428098 1317.64816993586 82.621 2 0.17544266745227782 0.0005180580224985198 0.0016817460683437482 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 105566 15971 SSDGAISLLTY True H1975_Epitope_Rep2 1125.55536935797 1125.55426993586 66.632 2 0.1754416039618295 0.0005180580224985198 0.0016817873134508383 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 11933 16164 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.54754490379 70.116 3 0.1754305281738352 0.0005180580224985198 0.0016822169234128844 ['ENSG00000273749|ENST00000617928|CYFIP1'] 103176 12935 SPIENIQRVAA True PC9_epitope_Rep2 1196.6513354314802 1196.6502299358601 55.049 2 0.17542942409024928 0.0005180580224985198 0.0016822597548583663 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 74775 18136 NHDFTPLEI True PC9_epitope_Rep4 1084.5189242796 1084.5178299358602 77.825 2 0.17542882313201197 0.0005180580224985198 0.0016822830686880437 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 114929 11315 TQTAVITRI True PC9_epitope_Rep3 1001.5869442697699 1001.58584993586 48.529 2 0.17542881497461227 0.0005180580224985198 0.0016822833851519064 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 108710 11108 SYREDPIVY True PC9_epitope_Rep6 1140.5451390274397 1140.5440499358601 53.663 2 0.1754281287683289 0.0005180580224985198 0.0016823100065311905 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 39060 9698 HHSNIPMSL True PC9_epitope_Rep2 1034.49674936638 1034.49564993586 42.643 2 0.1754275455079724 0.0005180580224985198 0.0016823326344538956 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61417336-61434009:-|nuORF'] 9125 14701 AVIVWSFMK True NCI_RA007_Epitope_Rep3 1079.58377346563 1079.5826699358602 65.224 2 0.17542600112436968 0.0005180580224985198 0.001682392551180334 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 28607 8233 FSHAQTVVL True NCI_RA007_Epitope_Rep5 1000.5341804209199 1000.53308993586 38.348 2 0.17542389923761376 0.0005180580224985198 0.0016824741005280613 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 59016 14836 LEVNLQAMK True PC9_epitope_Rep1 1044.5637662970398 1044.5626699358602 61.885 2 0.17542076360231876 0.0005180580224985198 0.0016825957647780378 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 142380 10751 YYEKQFPEI True NCI_RA007_Epitope_Rep3 1215.5811901829898 1215.58008993586 49.335 2 0.17541849929041461 0.0005180580224985198 0.001682683626713096 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 89025 21821 QVLEDFPTI True PC9_epitope_Rep1 1060.54407639828 1060.54357496793 88.743 1 0.17541435312948106 0.0005180580224985198 0.0016828445218106617 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 134614 22524 VYSLQQFGF True PC9_epitope_Rep5 1087.53384606775 1087.53274993586 91.643 2 0.17541210411335845 0.0005180580224985198 0.0016829318031275373 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 106567 5429 STMSTNGIPR True NCI_RA007_Epitope_Rep5 1062.51279335334 1062.5116899358602 27.57 2 0.17540960329717098 0.0005180580224985198 0.001683028861791475 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 35752 14102 GTIDEIQKL True PC9_epitope_Rep4 1015.5549754351499 1015.55386993586 62.15 2 0.17540837692399489 0.0005180580224985198 0.0016830764603573435 ['ENSG00000167986|ENST00000301764|DDB1'] 114931 9841 TQTAVITRI True PC9_epitope_Rep4 1001.5869442697699 1001.58584993586 45.502 2 0.17540400510589155 0.0005180580224985198 0.001683246152361274 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 4813 6824 ALEEAMEQK True PC9_epitope_Rep5 1047.4906609264297 1047.4895699358601 31.221 2 0.1754017640056078 0.0005180580224985198 0.0016833331472509527 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 115139 9062 TRDEVDATL True PC9_epitope_Rep1 1018.4931034545799 1018.49200993586 39.707 2 0.175400453229127 0.0005180580224985198 0.0016833840309763658 ['DSCC1|p.C98Lfs*7|1|0.32|ENSG00000136982|chr8:119853105-119853105|C/-|frameshift_variant', 'ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 125939 10310 VLDEADLSRY True H1975_Epitope_Rep1 1179.57716743171 1179.57606993586 44.603 2 0.17539808598793333 0.0005180580224985198 0.0016834759300664213 ['ENSG00000204970|ENST00000504120|PCDHA1', 'PCDHA1|p.C759Lfs*3|1|0.36|ENSG00000204970|chr5:140788564-140788565|-/T|frameshift_variant', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1', 'PCDHA1|p.R635H|1|0.3|ENSG00000204970|chr5:140788194-140788194|G/A|missense_variant'] 2214 8594 AEMPADSGYPA True H1975_Epitope_Rep2 1107.45427541771 1107.4531699358602 38.011 2 0.1753948722530906 0.0005180580224985198 0.0016836006990754765 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 27232 21182 FLPDPSALQNL True PC9_epitope_Rep4 1213.6342883850098 1213.6331899358602 89.639 2 0.1753941126324468 0.0005180580224985198 0.001683630191696177 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 71911 16346 MEQISQFLQAA True H1975_Epitope_Rep3 1264.61217304144 1264.61106993586 68.349 2 0.17539019158112398 0.0005180580224985198 0.0016837824365432822 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 25989 8708 FGESDELIGQK True H1975_Epitope_Rep3 1221.5877321154096 1221.5866299358602 38.494 2 0.17538831711782008 0.0005180580224985198 0.0016838552222455537 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 6887 18633 AQIEDLQVKL True PC9_epitope_Rep5 1155.6499384491499 1155.6488499358602 76.697 2 0.1753850514901982 0.0005180580224985198 0.001683982034600332 ['ENSG00000157933|ENST00000378536|SKI'] 86520 15947 QLAQFVHEV True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 66.15 2 0.17538473080373906 0.0005180580224985198 0.0016839944881601222 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000535158.5_1_12:31227017-31242187:+|nuORF', 'ENST00000536265.5_1_12:31227017-31242486:+|nuORF', 'ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF', 'ENST00000542244.5_1_12:31237807-31242486:+|nuORF'] 52506 15346 KLADDVDLEQV True PC9_epitope_Rep4 1243.62959692739 1243.6284899358602 66.961 2 0.1753837807935117 0.0005180580224985198 0.0016840313814632112 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF', 'ENST00000480327.1_1_9:35060776-35061606:-|nuORF'] 95804 18592 RYINNPLLI True PC9_epitope_Rep4 1114.6498788795 1114.6487899358601 79.591 2 0.17538167127257956 0.0005180580224985198 0.0016841133068383129 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 17880 19696 EHVQLLQVI True PC9_epitope_Rep2 1077.61824439805 1077.6171499358602 81.148 2 0.1753809302066458 0.0005180580224985198 0.0016841420878291758 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 115753 15401 TSDDPWLTAY True H1975_Epitope_Rep3 1167.5084191655499 1167.50732993586 64.651 2 0.175373717044315 0.0005180580224985198 0.0016844222532170527 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 23937 19798 EYLIVFPKL True PC9_epitope_Rep6 1120.6532329244399 1120.65212993586 88.811 2 0.1753704315857328 0.0005180580224985198 0.0016845498787035659 ['ENSG00000198060|ENST00000358935|MARCHF5'] 76488 14038 NQIECHPYL True PC9_epitope_Rep5 1115.50697969691 1115.50588993586 59.012 2 0.17536964275763758 0.0005180580224985198 0.0016845805226159798 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2'] 112429 8461 TLDDESLKY True H1975_Epitope_Rep1 1082.5131701928199 1082.5120699358602 37.474 2 0.17536879128139782 0.0005180580224985198 0.0016846136008716874 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 17623 14923 EHIPESPYL True PC9_epitope_Rep2 1083.52367530687 1083.52256993586 62.663 2 0.17535738206376605 0.0005180580224985198 0.0016850568903331654 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'FLNB|p.P2279L|1|0.08|ENSG00000136068|chr3:58156023-58156023|C/T|missense_variant'] 118540 17990 TYQLGFHSI True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 73.991 2 0.17535686198257194 0.0005180580224985198 0.0016850771001558939 ['ENSG00000142507|ENST00000270586|PSMB6'] 100272 14960 SIYNGDMEKI True PC9_epitope_Rep5 1168.5434247752798 1168.5423299358602 62.546 2 0.17535470218110094 0.0005180580224985198 0.0016851610304265115 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 61914 17596 LLDELPM[Oxidation]IY True H1975_Epitope_Rep2 1121.56784899841 1121.5667499358601 72.997 2 0.17535299305634458 0.0005180580224985198 0.0016852274502862656 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 48194 21327 IYPSPTGVLI True PC9_epitope_Rep5 1058.60119735158 1058.60067496793 87.091 1 0.17534559492515275 0.0005180580224985198 0.0016855149860576493 ['ENSG00000174231|ENST00000304992|PRPF8'] 110608 18726 TFTFSHATF True PC9_epitope_Rep1 1057.4868958753298 1057.48578993586 76.819 2 0.17534205889795468 0.0005180580224985198 0.0016856524346425441 ['ENSG00000204713|ENST00000377199|TRIM27'] 134682 15186 VYTDFAFRI True NCI_RA007_Epitope_Rep5 1130.5760452328998 1130.57494993586 65.096 2 0.17533925917871104 0.0005180580224985198 0.0016857612702299702 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 25399 6061 FEDDYTHSA True H1975_Epitope_Rep3 1083.41451878071 1083.4134299358602 28.324 2 0.1753336743474178 0.0005180580224985198 0.0016859783945850795 ['ENSG00000162664|ENST00000340281|ZNF326', 'nc|ENSG00000162664|Q5BKZ1-2|ZNF326'] 40192 17137 HQFESSFEL True PC9_epitope_Rep2 1122.4981888350198 1122.49708993586 71.166 2 0.1753297742069787 0.0005180580224985198 0.0016861300389531425 ['ENSG00000197442|ENST00000359015|MAP3K5'] 114999 12587 TRAEMILKV True PC9_epitope_Rep5 1059.6110508426298 1059.6099499358602 53.416 2 0.17532819934231547 0.0005180580224985198 0.0016861912763512002 ['ENSG00000141252|ENST00000437048|VPS53', 'ENST00000541903.6_1_17:422370-426182:-|nuORF'] 1275 4573 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 22.695 2 0.17532626508014362 0.0005180580224985198 0.001686266491691382 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 8479 5792 ATQVAVSVPK True NCI_RA007_Epitope_Rep3 998.5760452328999 998.57494993586 29.76 2 0.17532525516396608 0.0005180580224985198 0.0016863057644290462 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 71429 17668 LYTEKFEEF True PC9_epitope_Rep2 1204.5652057656796 1204.5641099358602 73.24 2 0.17531402316585165 0.0005180580224985198 0.0016867426062920738 ['ENSG00000084652|ENST00000373610|TXLNA'] 111010 10159 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5289149037899 43.952 3 0.17531076588786115 0.0005180580224985198 0.0016868693115684224 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 133755 4499 VYEGERPLTK True NCI_RA007_Epitope_Rep2 1190.6295373577398 1190.62789490379 22.131 3 0.17529208640338728 0.0005180580224985198 0.0016875961112931726 ['ENSG00000044574|ENST00000324460|HSPA5'] 107037 4950 SVFQTTDTK True NCI_RA007_Epitope_Rep5 1025.5029398622898 1025.50184993586 25.74 2 0.175290249288432 0.0005180580224985198 0.0016876676084983603 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 16346 12989 EEIEGLISA True NCI_RA007_Epitope_Rep3 959.4811417885498 959.48004993586 58.368 2 0.17527608646191803 0.0005180580224985198 0.0016882189020242572 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 30235 17786 FYTVIPHNF True PC9_epitope_Rep6 1136.5654805492 1136.5643899358602 81.048 2 0.17527586406718831 0.0005180580224985198 0.0016882275602633076 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 23949 18070 EYLLKVNEI True PC9_epitope_Rep4 1119.61757569171 1119.61646993586 77.568 2 0.17527103925452667 0.0005180580224985198 0.0016884154101090177 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 65408 14467 LREPLPATL True PC9_epitope_Rep4 1008.59678067748 1008.59568993586 63.558 2 0.17526869886082225 0.0005180580224985198 0.0016885065388214523 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 91554 15140 RIIDVVYNA True PC9_epitope_Rep4 1061.58694426977 1061.58584993586 66.163 2 0.17526849603379296 0.0005180580224985198 0.0016885144365989463 ['ENSG00000142937|ENST00000396651|RPS8'] 134503 15140 VYQHLFTRI True PC9_epitope_Rep1 1175.6451278522297 1175.64349490379 63.058 3 0.17526694514574048 0.0005180580224985198 0.00168857482705476 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 133551 22776 VWSDVTPLTF True PC9_epitope_Rep1 1163.58627556343 1163.5851699358602 92.416 2 0.17526219357113434 0.0005180580224985198 0.001688759863386415 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 108496 20726 SYMGHFDLL True PC9_epitope_Rep1 1081.49026700361 1081.48967496793 84.547 1 0.17526047633219075 0.0005180580224985198 0.0016888267412852281 ['ENSG00000169976|ENST00000367569|SF3B5'] 98075 11238 SEQVPLMSA True H1975_Epitope_Rep2 960.4586325221599 960.4580849679301 48.27 1 0.1752600373046918 0.0005180580224985198 0.0016888438396440108 ['ENSG00000075188|ENST00000552283|NUP37', 'ENST00000551200.5_1_12:102471044-102512308:-|nuORF'] 56201 16213 LAYSGKLEEL True PC9_epitope_Rep5 1121.5968402471299 1121.59574993586 67.355 2 0.1752565639125282 0.0005180580224985198 0.0016889791204365528 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10', 'ENST00000338548.4_1_X:107331957-107334750:-|nuORF', 'ENST00000553388.1_1_X:107330914-107334750:-|nuORF'] 7246 16519 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.5233099358602 68.781 2 0.17524345279374884 0.0005180580224985198 0.0016894898667316068 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 106161 7233 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4548899358601 32.758 2 0.17524291934995462 0.0005180580224985198 0.0016895106504165674 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 90694 7094 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 32.256 2 0.17524095365700337 0.0005180580224985198 0.0016895872386574068 ['ENSG00000129250|ENST00000320785|KIF1C'] 25647 4606 FEQAGEPRQP True H1975_Epitope_Rep3 1157.5465360097699 1157.54542993586 22.839 2 0.17524079257191127 0.0005180580224985198 0.0016895935150836143 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 4115 19088 AHSNEILIF True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 78.788 2 0.1752385352278817 0.0005180580224985198 0.001689681471384378 ['ENSG00000165516|ENST00000298307|KLHDC2', 'KLHDC2|p.R347T|1|0.07|ENSG00000165516|chr14:49782453-49782453|G/C|missense_variant', 'ENST00000554115.5_1_14:50249154-50249313:+|nuORF'] 137399 6116 YEAELGDAR True NCI_RA007_Epitope_Rep1 1022.4668887067398 1022.46578993586 27.827 2 0.17523822758495708 0.0005180580224985198 0.00168969345889472 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 49537 11322 KFIDTTSKF True PC9_epitope_Rep5 1085.57571087973 1085.57460993586 48.544 2 0.1752205971464237 0.0005180580224985198 0.0016903805828989591 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 96216 13736 RYPTSIASL True PC9_epitope_Rep4 1006.5447451046199 1006.54364993586 60.733 2 0.17521739385530077 0.0005180580224985198 0.0016905054571425162 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 27798 6434 FQDDDQTRV True PC9_epitope_Rep5 1122.4941660837399 1122.4930699358601 29.723 2 0.1752081465963764 0.0005180580224985198 0.0016908659958556906 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 48158 11501 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 49.562 3 0.17520663278531348 0.0005180580224985198 0.0016909250247318154 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 92142 20543 RLEEAFEFV True PC9_epitope_Rep3 1138.56587447202 1138.56476993586 84.283 2 0.17520544183476175 0.0005180580224985198 0.0016909714655787252 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 43060 8361 IEVFPTKSA True H1975_Epitope_Rep2 990.5385970950199 990.53750993586 37.113 2 0.17519402170658263 0.0005180580224985198 0.0016914168557314254 ['ENST00000458502.2_1_17:20744565-20744838:+|nuORF', 'nc|ENSG00000129968|Q96GS6-4|ABHD17A', 'ENST00000588598.5_1_19:1879918-1881565:-|nuORF', 'nc|ENSG00000129968|Q96GS6-3|ABHD17A', 'ENSG00000129968|ENST00000292577|ABHD17A', 'nc|ENSG00000129968|Q96GS6-2|ABHD17A'] 40751 18478 HRTEMDWVL True PC9_epitope_Rep1 1185.5600778989299 1185.55843490379 75.867 3 0.17519301647733188 0.0005180580224985198 0.001691456065749944 ['ENSG00000169813|ENST00000682386|HNRNPF'] 66619 7219 LSKDPNIVIAK True PC9_epitope_Rep2 1196.71287305888 1196.71123490379 33.156 3 0.17517932158321117 0.0005180580224985198 0.0016919903400877843 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 90241 7561 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6357099358602 34.037 2 0.17517465991026693 0.0005180580224985198 0.0016921722429245058 ['ENSG00000131558|ENST00000253861|EXOC4'] 48389 7325 IYTSSVNRL True NCI_RA007_Epitope_Rep4 1051.56620882519 1051.5651099358602 34.813 2 0.1751735838651049 0.0005180580224985198 0.0016922142339941826 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 37902 7668 GYSFTTTAER True NCI_RA007_Epitope_Rep1 1131.51965255559 1131.5185499358602 33.819 2 0.1751733542035565 0.0005180580224985198 0.00169222319633126 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 29461 13691 FVEPSRQFV True PC9_epitope_Rep2 1107.5712942056298 1107.57018993586 57.953 2 0.17517198599157707 0.0005180580224985198 0.0016922765905683264 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 4491 21999 AIWKELISL True PC9_epitope_Rep1 1071.63283183303 1071.6317299358602 89.441 2 0.1751660285149264 0.0005180580224985198 0.0016925090997329175 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V509M|1|0.2|ENSG00000080345|chr2:151438725-151438725|G/A|missense_variant'] 140759 16767 YSDEFGNLDF True H1975_Epitope_Rep3 1205.4876837209702 1205.4865899358601 70.037 2 0.17516469062865614 0.0005180580224985198 0.0016925613193281464 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 118182 13887 TYITSVSRL True PC9_epitope_Rep2 1038.57095985246 1038.5698699358602 58.697 2 0.1751631992522781 0.0005180580224985198 0.0016926195317609521 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 46616 8586 ITDHGSLIY True H1975_Epitope_Rep1 1017.51311062317 1017.51200993586 37.954 2 0.1751609957187585 0.0005180580224985198 0.001692705545272149 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 41434 17170 HYILHNSFF True PC9_epitope_Rep2 1176.5716285587998 1176.5705299358601 71.305 2 0.17515879784930152 0.0005180580224985198 0.0016927913420498003 ['ENSG00000163659|ENST00000295924|TIPARP'] 76986 13143 NRFPAVNSL True PC9_epitope_Rep4 1016.5403284305199 1016.53922993586 58.449 2 0.17515496550938386 0.0005180580224985198 0.0016929409529859425 ['nc|ENSG00000108587|O95249-2|GOSR1', 'ENSG00000108587|ENST00000451249|GOSR1', 'nc|ENSG00000108587|O95249|GOSR1'] 61994 18592 LLDPNVKSIFV True PC9_epitope_Rep6 1243.71762408615 1243.71652993586 84.157 2 0.1751443362668969 0.0005180580224985198 0.0016933559778739746 ['ENSG00000117419|ENST00000372257|ERI3', 'nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3'] 87813 7042 QREAEQSNVAL True PC9_epitope_Rep5 1243.61567819875 1243.61458993586 32.054 2 0.17514239255185232 0.0005180580224985198 0.001693431882362794 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 21787 17286 ERYFISHVL True PC9_epitope_Rep1 1162.61349337078 1162.6123899358602 71.308 2 0.1751268271184082 0.0005180580224985198 0.0016940398547741343 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 108445 21312 SYLPLAHMF True PC9_epitope_Rep5 1077.53173789277 1077.53064993586 87.031 2 0.1751265753198071 0.0005180580224985198 0.0016940496916064594 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 78639 17792 NYTDIKDYL True PC9_epitope_Rep6 1143.54480467427 1143.54370993586 81.071 2 0.17511859051253448 0.0005180580224985198 0.001694361657912848 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 114637 7207 TQDTQPHYI True PC9_epitope_Rep2 1101.50908787189 1101.50798993586 33.111 2 0.17511392959029926 0.0005180580224985198 0.0016945437866652268 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 90847 8614 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 38.09 3 0.17509459792107118 0.0005180580224985198 0.0016952993942492894 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 134029 8076 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 40.565 3 0.17509387190504497 0.0005180580224985198 0.0016953277782573472 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 41511 16411 HYMSINDSF True PC9_epitope_Rep5 1112.45969515132 1112.4585899358601 68.123 2 0.1750851097458802 0.0005180580224985198 0.0016956703773624217 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 23668 12790 EYAVSVLLR True NCI_RA007_Epitope_Rep1 1048.59169529704 1048.5905899358602 53.737 2 0.17508301356138195 0.0005180580224985198 0.0016957523481356583 ['CON__P02769'] 9466 6226 AVVIVDDR True NCI_RA007_Epitope_Rep4 885.4919812557699 885.49088993586 30.555 2 0.1750801059346705 0.0005180580224985198 0.0016958660567231857 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 37918 8884 GYSFTTTAER True PC9_epitope_Rep4 1131.51965255559 1131.5185499358602 41.704 2 0.1750738764596558 0.0005180580224985198 0.0016961096985654942 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 140681 14154 YRVFTTQEL True PC9_epitope_Rep6 1155.5924235730297 1155.5913299358601 66.313 2 0.17507284974973172 0.0005180580224985198 0.0016961498577205587 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 91063 14381 RFLNDPGHLLW True NCI_RA007_Epitope_Rep4 1366.7146043943799 1366.7135099358602 62.624 2 0.17506862719726424 0.0005180580224985198 0.0016963150303871764 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 71810 11537 MEHPYFYTV True H1975_Epitope_Rep1 1185.5164817514499 1185.5153899358602 49.361 2 0.1750669396870242 0.0005180580224985198 0.0016963810448622177 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 29365 10030 FVDKNNDLLY True H1975_Epitope_Rep1 1239.61355294043 1239.61244993586 43.519 2 0.17506597139590271 0.0005180580224985198 0.0016964189250412041 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 114499 6857 TQADWQHRV True PC9_epitope_Rep3 1139.5472047161102 1139.54554490379 31.391 3 0.17506528012015712 0.0005180580224985198 0.0016964459687164868 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF'] 14745 13575 DVNAAIATIK True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 57.072 2 0.17506379925505858 0.0005180580224985198 0.0016965039036858504 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 18142 18273 EIITIIHQV True PC9_epitope_Rep2 1064.6229954253201 1064.62188993586 75.608 2 0.1750563167476529 0.0005180580224985198 0.0016967966674888582 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 11285 20991 DEHLQLISL True PC9_epitope_Rep1 1066.56587447202 1066.56476993586 85.567 2 0.17505355785740212 0.0005180580224985198 0.0016969046257787593 ['ENSG00000163918|ENST00000296273|RFC4'] 14636 12505 DVDPETLSY True H1975_Epitope_Rep2 1037.45532096353 1037.45477496793 53.192 1 0.17505138920779725 0.0005180580224985198 0.001696989492156281 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 37885 12071 GYSEHFVEF True NCI_RA007_Epitope_Rep5 1113.47672511445 1113.47562993586 53.088 2 0.17505131522390777 0.0005180580224985198 0.0016969923874636842 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 78063 19381 NVVDVFHAV True PC9_epitope_Rep5 998.51853035678 998.51742993586 79.595 2 0.17503003416780863 0.0005180580224985198 0.0016978254119570703 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 7338 22630 ARPPWMWVL True PC9_epitope_Rep3 1154.60590589254 1154.6048099358602 92.315 2 0.17502776409583792 0.0005180580224985198 0.001697914295692063 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 23063 17113 EVIEKFDYV True PC9_epitope_Rep2 1140.5702911461199 1140.56918993586 71.074 2 0.17502357386132697 0.0005180580224985198 0.001698078374838949 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 77276 12624 NSDELQELY True H1975_Epitope_Rep2 1109.48768372097 1109.4871749679298 53.656 1 0.1750214094828088 0.0005180580224985198 0.0016981631327286125 ['nc|ENSG00000160209|O00764-2|PDXK', 'PDXK|p.E67A|1|0.21|ENSG00000160209|chr21:43741724-43741724|A/C|missense_variant', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 54253 17462 KWNPTAGVAF True PC9_epitope_Rep2 1089.56072952193 1089.5596299358601 72.418 2 0.175020001767122 0.0005180580224985198 0.0016982182616860895 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 118205 21652 TYKNFFYLI True PC9_epitope_Rep2 1207.62774645259 1207.62664993586 88.76 2 0.1750168712349765 0.0005180580224985198 0.0016983408659998556 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 48470 7506 KADPSHFEL True NCI_RA007_Epitope_Rep4 1042.5083595959 1042.5072699358602 35.516 2 0.17500109432585892 0.0005180580224985198 0.0016989588885276902 ['nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENST00000524436.5_1_1:26856411-26877988:+|nuORF', 'ENST00000530607.1_1_1:26872355-26877988:+|nuORF'] 11744 11990 DHASIQMNV True PC9_epitope_Rep5 1013.46002950449 1013.4589299358599 51.115 2 0.17500055608661766 0.0005180580224985198 0.0016989799767289145 ['ENSG00000171858|ENST00000343986|RPS21'] 21470 14552 ERLGQFM[Oxidation]TL True PC9_epitope_Rep4 1109.55393026977 1109.55282993586 63.888 2 0.1749985274050092 0.0005180580224985198 0.0016990594627836276 ['ENSG00000113739|ENST00000265087|STC2'] 53147 17016 KPYNVYITV True PC9_epitope_Rep3 1095.59644632431 1095.5953499358602 70.608 2 0.17499713543755968 0.0005180580224985198 0.0016991140038065714 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 40342 11340 HQQSIPAVL True PC9_epitope_Rep6 991.5450794577898 991.5439899358599 54.656 2 0.17499599932219517 0.0005180580224985198 0.0016991585211569482 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 142288 23468 YYASFLEVL True PC9_epitope_Rep5 1103.55391280599 1103.55280993586 95.254 2 0.1749914650061701 0.0005180580224985198 0.0016993362046528082 ['nc|ENSG00000104131|O75822-3|EIF3J', 'ENSG00000104131|ENST00000261868|EIF3J', 'ENST00000558053.1_1_15:44846774-44849853:+|nuORF', 'ENST00000451571.1_1_9:79607732-79607996:+|nuORF'] 76967 13736 NREDSMNIL True PC9_epitope_Rep5 1090.5077079729 1090.50660993586 57.858 2 0.1749911994195404 0.0005180580224985198 0.0016993466126119237 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 98358 7509 SEYLRYEDT True H1975_Epitope_Rep2 1174.51423282198 1174.5131299358602 33.833 2 0.17498834272675762 0.0005180580224985198 0.0016994585663403655 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.S161Yfs*79|1|0.19|ENSG00000265972|chr1:145995023-145995024|-/ACAGGTGCCTATATAGAAGGGGATAA|frameshift_variant'] 126551 19621 VLLPEGGITAI True PC9_epitope_Rep6 1081.63831113629 1081.63720993586 88.131 2 0.17498489929918237 0.0005180580224985198 0.0016995935240080031 ['ENSG00000122965|ENST00000261741|RBM19'] 37909 10049 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 43.522 2 0.1749769896822444 0.0005180580224985198 0.0016999035649041957 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 118490 15764 TYPYLQHEI True PC9_epitope_Rep5 1162.5658744720201 1162.56476993586 65.63 2 0.174969536123716 0.0005180580224985198 0.0017001957810611036 ['nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 24296 21051 EYTRALFLL True PC9_epitope_Rep2 1124.62299542532 1124.62188993586 86.427 2 0.174968739031514 0.0005180580224985198 0.0017002270339728008 ['ENSG00000129933|ENST00000262815|MAU2'] 35175 5247 GQYGNPLNK True NCI_RA007_Epitope_Rep3 989.4930438849299 989.49194993586 27.642 2 0.17496687480399645 0.0005180580224985198 0.0017003001300687217 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 75857 15097 NLQEAEEWYK True PC9_epitope_Rep2 1308.59863115228 1308.5975299358602 63.329 2 0.17496367227532472 0.0005180580224985198 0.0017004257081078618 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 47902 15425 IYIKHPHLF True PC9_epitope_Rep3 1166.66004964038 1166.6584049037901 64.487 3 0.17496259817315582 0.0005180580224985198 0.0017004678280441872 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 54609 18295 KYLDEDTIYHL True PC9_epitope_Rep1 1408.68744615668 1408.68634993586 75.161 2 0.1749621089776781 0.0005180580224985198 0.0017004870117446188 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 124942 13755 VHSEQVFAL True PC9_epitope_Rep6 1028.5290950404797 1028.5279899358602 64.706 2 0.17495688484827318 0.0005180580224985198 0.0017006918884216711 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 36921 14897 GVLQLGNIVFK True NCI_RA007_Epitope_Rep3 1186.70739375562 1186.70628993586 66.028 2 0.17495664934333655 0.0005180580224985198 0.0017007011248908056 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 14362 5697 DSYVGDEAQTK True H1975_Epitope_Rep3 1211.5306111621096 1211.52950993586 26.944 2 0.17495305935281236 0.0005180580224985198 0.0017008419300118685 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 41115 13001 HTVEDLVKV True PC9_epitope_Rep5 1038.5709598524597 1038.5698699358602 55.017 2 0.17494930748191956 0.0005180580224985198 0.0017009890968106753 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 23881 16626 EYIRSLNQF True PC9_epitope_Rep1 1168.58767254576 1168.58656993586 68.78 2 0.1749452193576864 0.0005180580224985198 0.0017011494676308035 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 141397 7613 YTEKNGQLIY True H1975_Epitope_Rep3 1227.6135529404298 1227.61244993586 34.264 2 0.17493725106883384 0.0005180580224985198 0.0017014620948456861 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 77147 4705 NRPGTVSSL True PC9_epitope_Rep6 929.49304388493 929.49194993586 25.49 2 0.1749259121438717 0.0005180580224985198 0.001701907064500323 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 49895 19824 KIIDEDGLLNL True PC9_epitope_Rep4 1241.68671788069 1241.68562993586 84.381 2 0.1749238300055515 0.0005180580224985198 0.0017019887858212889 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 76719 15747 NQTPVTLQV True PC9_epitope_Rep4 998.5396597241801 998.53856993586 68.495 2 0.1749209313331736 0.0005180580224985198 0.0017021025616232076 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 104002 15503 SQDARFYAL True PC9_epitope_Rep5 1069.51925863277 1069.5181699358602 64.642 2 0.17491985140292732 0.0005180580224985198 0.001702144951916888 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 6933 16014 AQIKEMVEL True PC9_epitope_Rep5 1059.56343194387 1059.5623299358601 66.588 2 0.1749168877770016 0.0005180580224985198 0.0017022612879842843 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 96063 6033 RYLSKATTL True NCI_RA007_Epitope_Rep4 1051.60259433391 1051.6014899358602 29.823 2 0.1749092780988691 0.0005180580224985198 0.0017025600396206818 ['nc|ENSG00000130177|Q13042-4|CDC16', 'nc|ENSG00000130177|Q13042-3|CDC16', 'nc|ENSG00000130177|Q13042-2|CDC16', 'ENSG00000130177|ENST00000356221|CDC16'] 125202 14008 VIIESDLERA True PC9_epitope_Rep5 1143.6135529404298 1143.61244993586 58.9 2 0.1749083244421259 0.0005180580224985198 0.0017025974833435366 ['ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 36636 21872 GVIDLIFEKA True PC9_epitope_Rep3 1103.62266107215 1103.6215699358602 89.434 2 0.17490676821121964 0.0005180580224985198 0.00170265858789463 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 109894 17220 TEFLSFM[Oxidation]NTEL True H1975_Epitope_Rep1 1346.6064193350996 1346.60532993586 71.696 2 0.17489835510038995 0.0005180580224985198 0.0017029889620877776 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 93440 5471 RQGNMTAAL True NCI_RA007_Epitope_Rep5 960.4810993022398 960.48000993586 27.73 2 0.1748927970463954 0.0005180580224985198 0.0017032072563461995 ['ENSG00000162704|ENST00000359856|ARPC5'] 29791 18237 FVPIKVEQI True PC9_epitope_Rep5 1071.63283183303 1071.6317299358602 75.163 2 0.17488661410029632 0.0005180580224985198 0.001703450126348734 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 108220 19038 SYIALPLTL True NCI_RA007_Epitope_Rep4 989.57973363101 989.57862993586 82.352 2 0.17488293654522677 0.0005180580224985198 0.0017035945994643069 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 30236 22182 FYVDSDMVNEF True PC9_epitope_Rep1 1364.5594687622395 1364.5583699358601 90.143 2 0.17488266231210495 0.0005180580224985198 0.001703605373231182 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 54691 18998 KYLTEGLLQF True PC9_epitope_Rep6 1210.65977485686 1210.6586699358602 85.719 2 0.17487603616494649 0.0005180580224985198 0.0017038657146933364 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 4350 17615 AILELDEHL True PC9_epitope_Rep6 1051.55497543515 1051.5538699358601 80.396 2 0.1748682032249882 0.0005180580224985198 0.0017041735224453832 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 4340 14871 AIKEILTQV True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 65.14 2 0.17486756279630572 0.0005180580224985198 0.0017041986915642376 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1'] 39336 6563 HIYYITGETK True NCI_RA007_Epitope_Rep1 1223.6186383208699 1223.61700490379 29.543 3 0.17486478862365 0.0005180580224985198 0.0017043077220240757 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 54298 5129 KYADLSHNRL True NCI_RA007_Epitope_Rep4 1215.6360197205101 1215.6343649037901 26.245 3 0.17485258636005158 0.0005180580224985198 0.001704787377986353 ['ENSG00000113643|ENST00000231572|RARS1', 'nc|ENSG00000113643|P54136-2|RARS1'] 112037 7787 TISNDGATILK True NCI_RA007_Epitope_Rep1 1131.6135529404298 1131.61244993586 34.28 2 0.17484883402672038 0.0005180580224985198 0.0017049349047600654 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7'] 38279 10919 HEENPAWLP True H1975_Epitope_Rep3 1091.50360856863 1091.5025099358602 47.088 2 0.17483648561060255 0.0005180580224985198 0.0017054204854569175 ['nc|ENSG00000114993|Q9BST9-2|RTKN', 'ENSG00000114993|ENST00000272430|RTKN', 'nc|ENSG00000114993|Q9BST9-3|RTKN'] 111600 8982 TIDEHDAII True H1975_Epitope_Rep1 1025.5029398622898 1025.50184993586 39.454 2 0.17483275662094258 0.0005180580224985198 0.0017055671489221021 ['nc|ENSG00000152558|Q8N131-2|TMEM123', 'ENSG00000152558|ENST00000398136|TMEM123'] 37680 8160 GVYGDVQRV True PC9_epitope_Rep6 991.5086939490699 991.50758993586 40.933 2 0.1748286518641221 0.0005180580224985198 0.001705728606142374 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 88963 19701 QVIEELFKA True PC9_epitope_Rep3 1075.5913609438699 1075.59026993586 81.01 2 0.17481083177689472 0.0005180580224985198 0.0017064297219983324 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 8689 7753 AVALPLQTK True NCI_RA007_Epitope_Rep3 939.57531695691 939.57420993586 37.619 2 0.174809844809904 0.0005180580224985198 0.0017064685617888833 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 20815 21214 EQIKDIFYI True PC9_epitope_Rep1 1167.6175756917098 1167.61646993586 86.425 2 0.17480867660684823 0.0005180580224985198 0.0017065145348470609 ['ENSG00000164902|ENST00000297540|PHAX'] 4416 17572 AIQDKLFQV True PC9_epitope_Rep4 1060.59169529704 1060.5905899358602 75.607 2 0.17480318143329346 0.0005180580224985198 0.0017067308066384874 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 40467 8208 HRDGALTQL True PC9_epitope_Rep1 1009.53049202281 1009.52938993586 36.404 2 0.1747959845006472 0.0005180580224985198 0.0017070140955239472 ['ENSG00000127948|ENST00000461988|POR'] 75033 20685 NHSFMPIVL True PC9_epitope_Rep5 1056.54263692964 1056.5415299358601 84.62 2 0.17479177035681925 0.0005180580224985198 0.0017071799963931742 ['ENSG00000198712|ENST00000361739|MT-CO2'] 76170 8114 NNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 975.50591744819 975.50480993586 35.56 2 0.1747817067672702 0.0005180580224985198 0.001707576241403452 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 115035 14631 TRDAGYGGLSL True PC9_epitope_Rep2 1108.5512870370399 1108.55018993586 61.545 2 0.17477137304250254 0.0005180580224985198 0.001707983218570826 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 141896 7389 YVDSEGHLY True H1975_Epitope_Rep3 1081.47163973401 1081.4705499358602 33.4 2 0.1747700541651395 0.0005180580224985198 0.0017080351674269132 ['ENSG00000105974|ENST00000341049|CAV1', 'ENST00000489856.1_1_7:116165116-116166890:+|nuORF'] 70765 13158 LYADVGGKQF True PC9_epitope_Rep2 1096.55530978832 1096.5542099358602 55.883 2 0.17475474065718347 0.0005180580224985198 0.001708638462325467 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 95361 15590 RVVDYLTKL True PC9_epitope_Rep4 1105.64954452633 1105.64844993586 67.887 2 0.17475466466874892 0.0005180580224985198 0.0017086414565172633 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 109603 6231 TEADVNPKAYP True H1975_Epitope_Rep2 1203.5771674317098 1203.57606993586 28.929 2 0.17474818473976972 0.0005180580224985198 0.0017088968061474527 ['ENSG00000100138|ENST00000401959|SNU13'] 40874 7890 HSEYHTLLY True H1975_Epitope_Rep2 1161.54547338061 1161.54436993586 35.295 2 0.17474717461512704 0.0005180580224985198 0.0017089366148024818 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant'] 92521 21016 RLYPWGVVEV True PC9_epitope_Rep3 1216.6604435631998 1216.65934993586 86.116 2 0.17474364070640627 0.0005180580224985198 0.0017090758922016307 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 95360 16407 RVVDYLTKL True PC9_epitope_Rep2 1105.64954452633 1105.64844993586 68.353 2 0.17473790895185143 0.0005180580224985198 0.0017093018146361776 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 28552 11666 FSEQVAMGY True H1975_Epitope_Rep1 1030.4429824580197 1030.4418899358602 49.862 2 0.1747322535961196 0.0005180580224985198 0.0017095247550446004 ['ENSG00000179051|ENST00000375436|RCC2'] 57344 5271 LEAERSTNIAA True H1975_Epitope_Rep3 1173.5989655054502 1173.5978699358602 25.358 2 0.17473016866324786 0.0005180580224985198 0.001709606952760019 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'ENST00000609021.1_1_6:125597294-125597426:-|nuORF'] 106561 3359 STMPHTSGMNR True NCI_RA007_Epitope_Rep4 1217.52812614765 1217.5264649037902 18.733 3 0.17472845515145083 0.0005180580224985198 0.0017096745102978123 ['ENSG00000150907|ENST00000379561|FOXO1'] 115450 9774 TRM[Oxidation]PDGPVAL True PC9_epitope_Rep2 1071.53828020563 1071.5371899358602 42.934 2 0.17472706815917033 0.0005180580224985198 0.0017097291963159979 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 28890 16836 FTDESYLELY True H1975_Epitope_Rep2 1278.5655996885 1278.56450993586 70.007 2 0.1747236761716951 0.0005180580224985198 0.0017098629422100551 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 96215 13648 RYPTSIASL True PC9_epitope_Rep4 1006.5447451046199 1006.54364993586 60.389 2 0.17471498843309374 0.0005180580224985198 0.0017102055470755886 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 68047 11744 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48076993586 50.166 2 0.17470309387475244 0.0005180580224985198 0.001710674725780921 ['ENSG00000174231|ENST00000304992|PRPF8'] 49936 16724 KILPDLNTV True PC9_epitope_Rep4 1011.59644632431 1011.59534993586 72.297 2 0.17470147681814105 0.0005180580224985198 0.0017107385202365074 ['ENSG00000142207|ENST00000382751|URB1'] 29128 19657 FTLSHITQL True PC9_epitope_Rep1 1058.5760452329 1058.57494993586 80.436 2 0.1746986690347474 0.0005180580224985198 0.0017108492956797452 ['ENSG00000148484|ENST00000345264|RSU1'] 29308 16639 FVDDYTVRV True PC9_epitope_Rep3 1112.55022440788 1112.54912993586 69.137 2 0.17469433761815853 0.0005180580224985198 0.0017110201970888088 ['ENSG00000115233|ENST00000409682|PSMD14'] 118080 20187 TYGEIFEKF True PC9_epitope_Rep3 1132.54407639828 1132.5429699358601 82.908 2 0.17469094017288675 0.0005180580224985198 0.0017111542594629818 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 54579 20962 KYITDWQNVF True PC9_epitope_Rep3 1312.6451874218799 1312.6440899358602 85.91 2 0.1746886200974345 0.0005180580224985198 0.001711245815125688 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 108700 13339 SYREDPIVY True PC9_epitope_Rep1 1140.5451390274397 1140.5440499358601 56.168 2 0.17468642120746386 0.0005180580224985198 0.0017113325930496047 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 94984 5804 RTQGLMIMK True NCI_RA007_Epitope_Rep3 1076.5834561957997 1076.58234993586 29.807 2 0.17468401601414843 0.0005180580224985198 0.0017114275176610765 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 4239 20168 AIDPHLLLSV True PC9_epitope_Rep4 1076.6229954253201 1076.62188993586 85.713 2 0.17468069764992467 0.0005180580224985198 0.0017115584906044886 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 21164 11299 ERDAYVQAL True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 48.785 2 0.17467881090047943 0.0005180580224985198 0.0017116329634352604 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 23959 23123 EYLPIGGLAEF True PC9_epitope_Rep5 1207.6124903112698 1207.6113899358602 93.93 2 0.1746766825591929 0.0005180580224985198 0.001711716976152327 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 14025 14233 DRIDENYSL True PC9_epitope_Rep5 1123.51456717515 1123.51346993586 59.752 2 0.17467486603783075 0.0005180580224985198 0.001711788683564199 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP', 'ENST00000475542.1_1_10:121689169-121691647:+|nuORF'] 24447 10373 FADLSEAANR True PC9_epitope_Rep5 1092.5199869087598 1092.5188899358602 44.884 2 0.17467039623676864 0.0005180580224985198 0.0017119651423349058 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 92126 13741 RLDAVTLLY True H1975_Epitope_Rep1 1062.60734536118 1062.6062499358602 57.994 2 0.17466986183182656 0.0005180580224985198 0.0017119862407877354 ['ENSG00000100036|ENST00000343605|SLC35E4'] 107581 12995 SVPIDLQKV True PC9_epitope_Rep6 997.58079626017 997.57968993586 61.561 2 0.17466248590175604 0.0005180580224985198 0.0017122774711115331 ['ENSG00000198056|ENST00000338193|PRIM1'] 115763 6677 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.55557496793 30.638 1 0.17466123774455142 0.0005180580224985198 0.0017123267581049962 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 101044 9910 SLGEISALTSK True H1975_Epitope_Rep3 1104.60265390356 1104.60154993586 43.151 2 0.17465298906077972 0.0005180580224985198 0.0017126525162672469 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 89693 12758 RAAEEFVNV True PC9_epitope_Rep5 1033.5192586327698 1033.5181699358602 54.08 2 0.17465153799435032 0.0005180580224985198 0.0017127098284007217 ['ENSG00000132661|ENST00000254998|NXT1'] 35026 17489 GQVDMDIKL True PC9_epitope_Rep3 1017.51648175145 1017.51538993586 72.448 2 0.17464371581091745 0.0005180580224985198 0.0017130188108196711 ['ENSG00000129250|ENST00000320785|KIF1C', 'KIF1C|p.D675Gfs*5|1|0.04|ENSG00000129250|chr17:5022102-5022103|-/G|frameshift_variant'] 73079 18243 MREDVAEGLTL True PC9_epitope_Rep3 1232.6070876609997 1232.6059899358602 75.383 2 0.17463703271278733 0.0005180580224985198 0.0017132828426781699 ['ENST00000579248.5_2_18:47017953-47018809:-|nuORF'] 72895 19356 MPTLPPPSV True PC9_epitope_Rep1 937.49428975489 937.49318993586 79.26 2 0.1746359283862875 0.0005180580224985198 0.0017133264756737543 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 133671 22068 VYAPPVGGFSF True PC9_epitope_Rep1 1139.56514619603 1139.56404993586 89.694 2 0.17463075677620674 0.0005180580224985198 0.0017135308257359356 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 130938 11114 VTDHLGVVYY True H1975_Epitope_Rep3 1164.58152453616 1164.5804299358601 47.845 2 0.17462500078969456 0.0005180580224985198 0.0017137582954353848 ['nc|ENSG00000148719|Q9NXW2-2|DNAJB12', 'ENSG00000148719|ENST00000444643|DNAJB12', 'ENST00000473051.1_1_10:74095570-74096546:-|nuORF'] 54685 20703 KYLTAEAFGF True PC9_epitope_Rep5 1145.5757108797297 1145.57460993586 84.691 2 0.17462439202652325 0.0005180580224985198 0.0017137823547951456 ['ENSG00000075618|ENST00000382361|FSCN1'] 11852 13537 DHHENKYLLL True PC9_epitope_Rep5 1280.65133543148 1280.6496749037901 57.092 3 0.17461495691178844 0.0005180580224985198 0.00171415528987484 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 46756 4953 ITESEEVVSR True H1975_Epitope_Rep3 1147.57208205127 1147.57098993586 24.179 2 0.17461380391484307 0.0005180580224985198 0.0017142008691369475 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 10162 9364 AYVHM[Oxidation]VTHF True PC9_epitope_Rep5 1119.5171508382302 1119.51604993586 40.973 2 0.1746115501865852 0.0005180580224985198 0.001714289965045903 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 103960 18565 SQANRLFYL True PC9_epitope_Rep2 1110.5821932425 1110.58108993586 76.762 2 0.17460746241412953 0.0005180580224985198 0.0017144515774604355 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 93455 2872 RQHNTEIRM True NCI_RA007_Epitope_Rep4 1183.5880239822698 1183.58638490379 16.081 3 0.17460220404602825 0.0005180580224985198 0.001714659492472217 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15'] 41285 16177 HVQPYIPSI True PC9_epitope_Rep4 1052.5654805492 1052.5643899358602 70.169 2 0.17458702513524277 0.0005180580224985198 0.0017152598057292834 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 21182 6112 ERDM[Oxidation]SNVSL True PC9_epitope_Rep2 1065.47607387189 1065.4749699358601 28.903 2 0.1745864671310963 0.0005180580224985198 0.0017152818783370573 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 85201 8796 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 38.759 2 0.17458163700181797 0.0005180580224985198 0.0017154729525098282 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 106557 7156 STMGYMMAK True NCI_RA007_Epitope_Rep3 1018.4285953471799 1018.42748993586 35.266 2 0.17458084767422788 0.0005180580224985198 0.0017155041793966513 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 86333 21361 QIYDIFQKL True PC9_epitope_Rep1 1166.6335601090198 1166.6324699358602 86.997 2 0.1745775944329177 0.0005180580224985198 0.0017156328881108103 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 30042 18847 FYGPQVNNI True PC9_epitope_Rep3 1050.51344497634 1050.5123499358601 77.717 2 0.17456957458058397 0.0005180580224985198 0.0017159502206176703 ['ENSG00000106299|ENST00000223023|WASL'] 122397 15395 VGDPSVHLL True PC9_epitope_Rep1 935.5076313199099 935.50652993586 64.035 2 0.1745624944323052 0.0005180580224985198 0.0017162304194019552 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 45847 19073 ISDPFYGPWY True H1975_Epitope_Rep2 1243.55497543515 1243.5538699358601 79.175 2 0.17455952641160163 0.0005180580224985198 0.0017163478932499992 ['nc|ENSG00000157600|Q5U3C3-2|TMEM164', 'ENSG00000157600|ENST00000372068|TMEM164'] 93429 4367 RQFSGARNQL True NCI_RA007_Epitope_Rep4 1175.6159529822698 1175.61430490379 23.147 3 0.17455212819454813 0.0005180580224985198 0.0017166407486986185 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3'] 139264 19134 YLINEIDRI True PC9_epitope_Rep4 1147.62372370131 1147.62262993586 81.693 2 0.17454895780862648 0.0005180580224985198 0.0017167662624630198 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 52402 5202 KKPQVVQAL True NCI_RA007_Epitope_Rep4 1009.6284151589299 1009.62730993586 26.541 2 0.17454705751684374 0.0005180580224985198 0.0017168414983310583 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 8660 6694 AVAEPLPSPR True NCI_RA007_Epitope_Rep4 1035.5712942056298 1035.57018993586 32.372 2 0.1745463432900965 0.0005180580224985198 0.0017168697766679123 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 87882 13102 QRIDEFEAM True PC9_epitope_Rep6 1137.5124590001699 1137.51136993586 62.01 2 0.17454161699332948 0.0005180580224985198 0.0017170569164058438 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 4785 19863 ALDVANKIGII True PC9_epitope_Rep3 1125.6757592741699 1125.67466993586 81.64 2 0.17453796976917163 0.0005180580224985198 0.0017172013437632098 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 76374 15424 NQAKYIPEL True PC9_epitope_Rep1 1074.57095985246 1074.5698699358602 64.147 2 0.1745310281188855 0.0005180580224985198 0.0017174762615420306 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 69624 13067 LVDPSVYGY True H1975_Epitope_Rep2 1011.49131254943 1011.4907749679301 55.385 1 0.17452682963632543 0.0005180580224985198 0.0017176425600294947 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 23957 23076 EYLPIGGLAEF True PC9_epitope_Rep3 1207.6124903112698 1207.6113899358602 94.031 2 0.17452619294608637 0.0005180580224985198 0.001717667780220888 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 27924 10173 FQEETGVRV True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 44.007 2 0.17451756687714293 0.0005180580224985198 0.0017180095074222175 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'WNK1|p.L900Afs*27|1|0.06|ENSG00000060237|chr12:879896-879897|TC/-|frameshift_variant'] 40800 11353 HRYGDSEFTV True PC9_epitope_Rep5 1209.54145062933 1209.5398049037901 48.665 3 0.17451040065562812 0.0005180580224985198 0.0017182934535995675 ['ENSG00000169813|ENST00000682386|HNRNPF'] 73128 14502 MRMLAEDEL True PC9_epitope_Rep6 1106.51001647202 1106.5089099358602 67.664 2 0.17450892631599704 0.0005180580224985198 0.0017183518769764582 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 76168 7579 NNDIM[Oxidation]LIK True H1975_Epitope_Rep3 975.50591744819 975.50480993586 34.133 2 0.17450677681661694 0.0005180580224985198 0.0017184370583439577 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 7972 10149 ATDDSLYY True H1975_Epitope_Rep2 946.39199243098 946.39144496793 44.037 1 0.17450607179080938 0.0005180580224985198 0.0017184649983573038 ['ENSG00000149260|ENST00000648180|CAPN5'] 107639 8842 SVQETVLPIK True NCI_RA007_Epitope_Rep3 1112.6441247927198 1112.64302993586 41.872 2 0.1745038463818341 0.0005180580224985198 0.0017185531937952878 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 141270 8220 YTDKIMTY True H1975_Epitope_Rep1 1033.47903361357 1033.4779299358602 36.562 2 0.17450034706934586 0.0005180580224985198 0.0017186918846143788 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 109825 5514 TEEKFIVKA True H1975_Epitope_Rep1 1063.5913609438699 1063.59026993586 26.272 2 0.17449720742001457 0.0005180580224985198 0.0017188163301766705 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 101354 21585 SLITLIEKV True PC9_epitope_Rep5 1014.6324974798599 1014.63140993586 88.067 2 0.1744960502286062 0.0005180580224985198 0.0017188621997829415 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'CPD|p.R370H|1|0.26|ENSG00000108582|chr17:30420955-30420955|G/A|missense_variant'] 85202 8890 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 39.107 2 0.17449225869211357 0.0005180580224985198 0.0017190125000880177 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 138530 20518 YHVDSLLQL True PC9_epitope_Rep5 1086.57095985246 1086.5698699358602 83.964 2 0.17448320938879688 0.0005180580224985198 0.0017193712767160046 ['ENSG00000141002|ENST00000263346|TCF25'] 134434 18518 VYPNSFFRY True PC9_epitope_Rep4 1191.5712942056298 1191.57018993586 79.302 2 0.1744809870370355 0.0005180580224985198 0.0017194593974911197 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 54823 17151 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 70.847 2 0.1744791926301995 0.0005180580224985198 0.0017195305526773242 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 21211 10137 ERDPATYNI True PC9_epitope_Rep5 1077.5090878718902 1077.50798993586 43.976 2 0.1744712029860854 0.0005180580224985198 0.0017198474088200356 ['ENSG00000138246|ENST00000260818|DNAJC13'] 85257 6012 QEQGELQGRLA True H1975_Epitope_Rep2 1227.6207635791898 1227.6196699358602 28.104 2 0.17447021150248052 0.0005180580224985198 0.0017198867335055737 ['nc|ENSG00000130787|O75146-2|HIP1R', 'ENST00000452196.6_1_12:123320097-123341792:+|nuORF', 'ENST00000535831.5_1_12:123319379-123341792:+|nuORF', 'ENSG00000130787|ENST00000253083|HIP1R'] 108668 20341 SYQKVIELF True PC9_epitope_Rep3 1125.6070110080097 1125.6059099358602 83.49 2 0.17446542078201355 0.0005180580224985198 0.0017200767579803812 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 95139 20245 RVFSDIIYTV True PC9_epitope_Rep2 1211.65502382959 1211.65392993586 83.292 2 0.17446524556645038 0.0005180580224985198 0.0017200837083241338 ['ENSG00000125676|ENST00000245838|THOC2'] 6754 15722 AQDEHLITF True PC9_epitope_Rep4 1072.5189242796 1072.5178299358602 68.399 2 0.17446438914121373 0.0005180580224985198 0.0017201176808809867 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 139266 21877 YLIPDIDLKL True PC9_epitope_Rep2 1201.69582601241 1201.69472993586 89.625 2 0.1744637453781757 0.0005180580224985198 0.0017201432180256437 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 99625 4763 SIFKQPVTK True NCI_RA007_Epitope_Rep5 1046.61243074162 1046.61132993586 25.004 2 0.17445875684037135 0.0005180580224985198 0.0017203411189412568 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 108329 18794 SYKNGFLNL True PC9_epitope_Rep5 1054.54474510462 1054.54364993586 77.303 2 0.1744540650906603 0.0005180580224985198 0.0017205272667389633 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 1567 6657 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43308993586 30.514 2 0.1744531782963945 0.0005180580224985198 0.0017205624530639693 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 136768 19152 WYQTKFETL True PC9_epitope_Rep3 1214.5971746002997 1214.5960699358602 78.89 2 0.17444784362679988 0.0005180580224985198 0.0017207741379010222 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 40664 10148 HRQEIQVVL True PC9_epitope_Rep4 1120.63529144452 1120.6341899358601 46.711 2 0.17443573391731698 0.0005180580224985198 0.0017212547596336732 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 109991 16457 TEIIILATR True PC9_epitope_Rep2 1028.62299542532 1028.62188993586 68.542 2 0.17441683430017207 0.0005180580224985198 0.0017220051342764892 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 95921 7556 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.6154299358602 36.844 2 0.17440925504977026 0.0005180580224985198 0.0017223061465078669 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 135586 20454 WLAEKLPTL True PC9_epitope_Rep5 1069.61718176889 1069.6160899358601 83.712 2 0.17440700053885974 0.0005180580224985198 0.0017223956952579801 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 103090 22161 SPGTALILLEA True PC9_epitope_Rep5 1083.61757569171 1083.61646993586 90.28 2 0.17439530192211716 0.0005180580224985198 0.0017228604369698302 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 28272 19885 FRNIPGITL True PC9_epitope_Rep1 1029.5971150306498 1029.5960099358601 81.306 2 0.1743929855435207 0.0005180580224985198 0.0017229524728020803 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 104888 18263 SRDAAWYQL True PC9_epitope_Rep3 1108.53015766964 1108.5290699358602 75.457 2 0.1743907982809807 0.0005180580224985198 0.0017230393830309988 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 2850 4875 AEVEHVVNA True H1975_Epitope_Rep3 966.4770594676199 966.47596993586 23.877 2 0.17438641847496975 0.0005180580224985198 0.0017232134265184249 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 9530 15170 AVYDFFIGR True NCI_RA007_Epitope_Rep5 1086.5498304850598 1086.5487299358601 65.035 2 0.17437646633043083 0.0005180580224985198 0.0017236089674462004 ['ENSG00000143815|ENST00000272163|LBR'] 47748 20236 IYEIIDNSQGF True PC9_epitope_Rep4 1297.6190322436898 1297.61792993586 85.979 2 0.1743656208032364 0.0005180580224985198 0.0017240401187324852 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 134549 15193 VYRTVIEYY True PC9_epitope_Rep4 1204.6128246644398 1204.61172993586 66.363 2 0.17436541241525177 0.0005180580224985198 0.00172404840401093 ['ENSG00000173418|ENST00000334982|NAA20'] 12643 19435 DLDAPDDVDFF True H1975_Epitope_Rep3 1267.52446315251 1267.52336993586 81.448 2 0.17436526226970697 0.0005180580224985198 0.0017240543736583508 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT', 'ENST00000477529.1_1_7:100485861-100486167:+|nuORF'] 18365 9272 EITALAPSTM[Oxidation]K True PC9_epitope_Rep5 1176.6060254122801 1176.6049299358601 40.613 2 0.1743630628388584 0.0005180580224985198 0.001724141823358088 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 9312 6212 AVQQPFINK True NCI_RA007_Epitope_Rep3 1043.5763795860698 1043.5752899358602 31.442 2 0.17435991753397415 0.0005180580224985198 0.0017242668888670365 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 95627 16468 RYALQMEQL True PC9_epitope_Rep2 1150.5804789903398 1150.57938993586 68.584 2 0.1743580544015367 0.0005180580224985198 0.0017243409761454305 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 108413 15046 SYLNSVQRL True PC9_epitope_Rep3 1078.5771078620598 1078.5760099358602 63.005 2 0.17435626777214208 0.0005180580224985198 0.0017244120242811245 ['nc|ENSG00000136243|O15504-2|NUP42', 'ENSG00000136243|ENST00000258742|NUP42'] 88175 16907 QRVPLSVQL True PC9_epitope_Rep3 1038.61857875122 1038.61748993586 70.191 2 0.17434260484842232 0.0005449591280653951 0.0017249554489008685 ['ENSG00000125826|ENST00000356286|RBCK1'] 115160 6789 TRDPAQRVVL True PC9_epitope_Rep2 1153.6567551650899 1153.65511490379 31.521 3 0.1743421738355961 0.0005449591280653951 0.001724972594652008 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 38479 6771 HEQFKATLP True H1975_Epitope_Rep2 1069.55564414149 1069.5545499358602 30.96 2 0.17433220911250757 0.0005449591280653951 0.0017253690403175963 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 7551 7296 ASEFPGAQHY True H1975_Epitope_Rep2 1105.48287312405 1105.48176993586 33.002 2 0.1743275268749833 0.0005449591280653951 0.0017255553542401148 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 17364 16315 EHDGSLFQAV True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 67.574 2 0.17432581841398975 0.0005449591280653951 0.0017256233417248018 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 140538 18565 YRPETGSWVF True PC9_epitope_Rep4 1240.58767254576 1240.58656993586 79.487 2 0.17432455902210453 0.0005449591280653951 0.001725673460410727 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 134168 11727 VYLPNINKI True NCI_RA007_Epitope_Rep3 1072.62808080576 1072.6269899358601 53.239 2 0.174319283705175 0.0005449591280653951 0.0017258834124521272 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 58501 6895 LEQEIATYR True NCI_RA007_Epitope_Rep5 1121.57168812845 1121.5705899358602 33.204 2 0.174314916008643 0.0005449591280653951 0.0017260572615111715 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 131101 11981 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.5222499358601 51.092 2 0.1743055477653024 0.0005449591280653951 0.0017264302083361115 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 53798 10643 KTDHFIFTY True H1975_Epitope_Rep3 1170.57095985246 1170.5693249037902 46.011 3 0.17430353363347006 0.0005449591280653951 0.001726510400827569 ['ENSG00000116212|ENST00000371370|LRRC42'] 83286 11092 PTDAYQLNY True H1975_Epitope_Rep2 1083.48728979815 1083.48618993586 47.7 2 0.17430259995921504 0.0005449591280653951 0.001726547576255385 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 106171 12696 STDPLDAGVDY True H1975_Epitope_Rep2 1151.4982484046698 1151.49714993586 53.938 2 0.17429454076645357 0.0005449591280653951 0.0017268684965771517 ['ENSG00000139645|ENST00000267116|ANKRD52'] 24446 9316 FADLSEAANR True PC9_epitope_Rep4 1092.5199869087598 1092.5188899358602 43.443 2 0.17428987737510881 0.0005449591280653951 0.0017270542219842797 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 485 17565 AAMNPDAVLRV True PC9_epitope_Rep1 1155.60702809135 1155.60592993586 72.357 2 0.17428960842510258 0.0005449591280653951 0.0017270649338653513 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1'] 135064 4973 WEAEAGRSP True H1975_Epitope_Rep3 1001.4566583762098 1001.45556993586 24.256 2 0.174287777934646 0.0005449591280653951 0.001727137841360504 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 28936 10447 FTDPGQVAY True H1975_Epitope_Rep2 996.4552613938799 996.45416993586 45.202 2 0.17428577199455764 0.0005449591280653951 0.0017272177404627235 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 46038 12694 ISGLIYEETR True PC9_epitope_Rep4 1179.6135529404298 1179.61244993586 56.681 2 0.17428461007177912 0.0005449591280653951 0.0017272640229924442 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 37919 9957 GYSFTTTAER True PC9_epitope_Rep5 1131.51965255559 1131.5185499358602 43.275 2 0.17428324257893046 0.0005449591280653951 0.0017273184955250345 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 29730 11603 FVNDIFER True NCI_RA007_Epitope_Rep2 1038.5134449763398 1038.5123499358601 49.724 2 0.17426227415813195 0.0005449591280653951 0.0017281539642685251 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 1746 8133 AEGQLRLPA True H1975_Epitope_Rep2 953.5294293936498 953.52832993586 36.233 2 0.1742510232661772 0.0005449591280653951 0.0017286024131626177 ['ENSG00000153395|ENST00000283415|LPCAT1'] 116561 10256 TTVTELQKV True PC9_epitope_Rep5 1017.5706254992899 1017.56952993586 44.436 2 0.174250224018551 0.0005449591280653951 0.0017286342747762787 ['ENSG00000102189|ENST00000322349|EEA1'] 141625 6028 YTSDSPGSY True H1975_Epitope_Rep3 975.38215602327 975.38160496793 28.201 1 0.17424648709373836 0.0005449591280653951 0.001728783253247416 ['ENSG00000160877|ENST00000292431|NACC1'] 133947 8428 VYIKHPVSL True PC9_epitope_Rep6 1054.61751612206 1054.61640993586 42.106 2 0.1742404265928838 0.0005449591280653951 0.0017290248921123083 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 86116 19776 QHVQEWWEL True PC9_epitope_Rep4 1253.5829215184897 1253.58182993586 84.194 2 0.1742380852004373 0.0005449591280653951 0.0017291182550704057 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1'] 54956 6838 KYQEVTNNL True NCI_RA007_Epitope_Rep1 1107.5560380643099 1107.5549499358601 30.603 2 0.17423639460793658 0.0005449591280653951 0.0017291856705365443 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 137786 6105 YEQETEPVA True H1975_Epitope_Rep2 1064.4662200003997 1064.4651299358602 28.46 2 0.1742354857077291 0.0005449591280653951 0.001729221915681251 ['ENSG00000198042|ENST00000360128|MAK16'] 134198 13299 VYLPTHTSL True PC9_epitope_Rep4 1029.54949613189 1029.54838993586 59.052 2 0.17423473266089287 0.0005449591280653951 0.001729251946277521 ['ENSG00000007944|ENST00000356840|MYLIP'] 43249 16675 IFNPVSKNF True PC9_epitope_Rep1 1064.5654805492002 1064.5643899358602 68.969 2 0.17422935960938593 0.0005449591280653951 0.0017294662322205666 ['ENST00000589391.5_1_2:179401165-179403504:+|nuORF', 'ENST00000415561.1_1_2:179402212-179403504:+|nuORF', 'ENST00000588244.5_1_2:179402120-179403504:+|nuORF', 'ENST00000419746.5_1_2:179402219-179403504:+|nuORF', 'ENST00000589434.5_1_2:179388144-179403504:+|nuORF'] 134073 9881 VYKPAQNSW True PC9_epitope_Rep1 1091.5399940773498 1091.5388899358602 42.865 2 0.1742273062169998 0.0005449591280653951 0.0017295481318348384 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 48028 16374 IYLPYLHEW True NCI_RA007_Epitope_Rep4 1232.62299542532 1232.62188993586 70.985 2 0.17422498417717797 0.0005449591280653951 0.0017296407511376176 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 92464 20709 RLSEFIPAVF True PC9_epitope_Rep4 1177.6495445263297 1177.64844993586 87.819 2 0.17422256983747567 0.0005449591280653951 0.0017297370572749865 ['ENSG00000164961|ENST00000318410|WASHC5', 'ENST00000523397.1_1_8:126095350-126096053:-|nuORF'] 23091 17839 EVIKELAQI True PC9_epitope_Rep5 1041.6070110080097 1041.60647496793 73.635 1 0.17422096011502697 0.0005449591280653951 0.0017298012708371567 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 127399 9368 VNELTEFAK True NCI_RA007_Epitope_Rep1 1049.53932537101 1049.53822993586 40.431 2 0.17421700795792028 0.0005449591280653951 0.0017299589367629558 ['CON__P02769'] 41061 6240 HTLNQIDSVK True PC9_epitope_Rep1 1153.6091362663299 1153.60750490379 28.815 3 0.1742126581756696 0.0005449591280653951 0.001730132482032812 ['CON__P12763'] 23924 13052 EYLENALKL True NCI_RA007_Epitope_Rep4 1091.58627556343 1091.5851699358602 57.305 2 0.1742051783932561 0.0005449591280653951 0.0017304309471172722 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6', 'GBP6|p.L464Tfs*13|1|0.05|ENSG00000183347|chr1:89383674-89383681|TCCTGGAG/-|frameshift_variant'] 41129 14660 HTVGELIEV True PC9_epitope_Rep6 995.5287606873098 995.52766993586 68.314 2 0.17420310713228418 0.0005449591280653951 0.0017305136055699836 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 18353 7191 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep2 1176.6060254122801 1176.60547496793 32.592 1 0.17419412437766535 0.0005449591280653951 0.001730872128884163 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48408 21016 IYVHDLLTF True PC9_epitope_Rep2 1119.59644632431 1119.5953499358602 86.291 2 0.17418255385601109 0.0005449591280653951 0.001731334045775307 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 21540 21584 ERNDLIVFL True PC9_epitope_Rep5 1117.6131590176099 1117.61206993586 88.063 2 0.17417689322110816 0.0005449591280653951 0.0017315600738735623 ['ENSG00000129636|ENST00000320640|ITFG1'] 106110 12018 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.54387496793 51.235 1 0.1741742421280641 0.0005449591280653951 0.001731665941682352 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 70788 17046 LYANM[Oxidation]FERL True PC9_epitope_Rep1 1171.56958033391 1171.56848993586 70.393 2 0.17417362063540368 0.0005449591280653951 0.001731690761087261 ['ENSG00000004478|ENST00000001008|FKBP4'] 54659 9380 KYLSGIAHF True NCI_RA007_Epitope_Rep4 1034.5549158654999 1034.55380993586 42.935 2 0.17417271742456072 0.0005449591280653951 0.0017317268315859208 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 130649 10204 VSTEVDARL True PC9_epitope_Rep1 988.5189242795998 988.51782993586 44.128 2 0.17416468256331932 0.0005449591280653951 0.0017320477437605913 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 43437 8427 IGGIGTVPVGR True NCI_RA007_Epitope_Rep5 1024.6029286870798 1024.60182993586 39.093 2 0.1741622728399055 0.0005449591280653951 0.0017321439996629843 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 141676 6085 YTTDRVM[Oxidation]TV True PC9_epitope_Rep4 1100.5172104078802 1100.5161099358602 30.413 2 0.1741590878491074 0.0005449591280653951 0.001732271231676929 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 4477 21572 AIVDLIHDI True PC9_epitope_Rep5 1007.5651461960299 1007.56404993586 88.016 2 0.1741521817637898 0.0005449591280653951 0.001732547143777537 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 50003 10587 KIYEGQVEV True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 46.039 2 0.17415121876295656 0.0005449591280653951 0.0017325856211068051 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 33196 18870 GIYTGFIKV True PC9_epitope_Rep4 996.5644179200399 996.56332993586 80.669 2 0.17414525042912524 0.0005449591280653951 0.0017328241088764322 ['ENSG00000153179|ENST00000542104|RASSF3'] 39073 20343 HHSSVIFIF True PC9_epitope_Rep3 1085.56581490237 1085.56470993586 83.498 2 0.17414312353179012 0.0005449591280653951 0.001732909105194814 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 21354 16939 ERFNVPVSL True PC9_epitope_Rep6 1059.5712942056298 1059.57018993586 77.7 2 0.17414284160495835 0.0005449591280653951 0.0017329203720334446 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 115714 8633 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 39.99 2 0.17414243147988098 0.0005449591280653951 0.0017329367622789223 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 78155 15293 NYAQVFNKL True PC9_epitope_Rep6 1095.57129420563 1095.57018993586 70.943 2 0.17413623891700655 0.0005449591280653951 0.0017331842608284758 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 77575 12830 NTDPSIVMTY True H1975_Epitope_Rep1 1139.51687567427 1139.51637496793 54.417 1 0.17413617732204711 0.0005449591280653951 0.0017331867227758176 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 8811 13241 AVDSLVPIGR True PC9_epitope_Rep6 1025.58694426977 1025.58584993586 62.58 2 0.17412089589096336 0.0005449591280653951 0.001733797628975322 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 30152 19629 FYPPHPDYTW True PC9_epitope_Rep5 1321.5767735088898 1321.57566993586 80.555 2 0.17411549630313639 0.0005449591280653951 0.0017340135399857208 ['ENSG00000130309|ENST00000252599|COLGALT1'] 92176 8097 RLFVGSIPK True NCI_RA007_Epitope_Rep1 1015.6178504752298 1015.61674993586 35.495 2 0.17411483455316681 0.0005449591280653951 0.0017340400029503445 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 94917 18242 RTFDETVSTYV True PC9_epitope_Rep5 1316.62484590012 1316.6237499358601 75.182 2 0.17411376131895798 0.0005449591280653951 0.0017340829217701538 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 91758 9812 RKFLETVEL True NCI_RA007_Epitope_Rep3 1133.6444591458899 1133.6433699358602 45.661 2 0.17410480389540703 0.0005449591280653951 0.0017344411721504482 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 54522 20391 KYIENLDNITF True PC9_epitope_Rep3 1368.6925315371197 1368.69142993586 83.685 2 0.17410397941343503 0.0005449591280653951 0.0017344741508670716 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF'] 118271 13426 TYLPAPEGLKF True NCI_RA007_Epitope_Rep3 1234.65977485686 1234.6586699358602 60.087 2 0.17409977242005523 0.0005449591280653951 0.0017346424375070137 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 71272 22232 LYPSIIQEF True PC9_epitope_Rep2 1108.580461907 1108.57987496793 90.992 1 0.17409500807478812 0.0005449591280653951 0.0017348330388744177 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 54818 10928 KYPDRVPVI True PC9_epitope_Rep4 1085.62332977849 1085.62222993586 49.803 2 0.174084847335247 0.0005449591280653951 0.0017352395972628162 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 142352 5266 YYEHVKARF True NCI_RA007_Epitope_Rep4 1211.60874234351 1211.60710490379 26.803 3 0.17408359687858088 0.0005449591280653951 0.0017352896379722743 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 40834 9812 HSDPSILGY True H1975_Epitope_Rep3 987.46616043075 987.46561496793 42.768 1 0.17407784597880477 0.0005449591280653951 0.0017355197957790041 ['ENSG00000146830|ENST00000678049|GIGYF1'] 99029 20359 SHEEALSFVSL True PC9_epitope_Rep5 1217.5928174958499 1217.59172993586 83.345 2 0.17407023235446636 0.0005449591280653951 0.0017358245490348271 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 118167 19081 TYIQKIFRM True PC9_epitope_Rep3 1198.65325000778 1198.65160490379 78.619 3 0.17406656657969197 0.0005449591280653951 0.00173597129941408 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 11758 15142 DHDGNIVEL True PC9_epitope_Rep3 1010.46688870674 1010.46578993586 63.383 2 0.174066450651803 0.0005449591280653951 0.0017359759405078093 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 96004 18084 RYLNEFEEL True PC9_epitope_Rep4 1211.5822528121498 1211.5811499358601 77.623 2 0.17404318152506246 0.0005449591280653951 0.0017369077555864812 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 35480 7837 GSLFLRTPK True NCI_RA007_Epitope_Rep2 1017.5971150306499 1017.59600993586 35.114 2 0.17404260877467762 0.0005449591280653951 0.0017369306977597285 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000437325.2_1_1:235901419-235901638:+|nuORF'] 133877 14764 VYGSFASKL True PC9_epitope_Rep3 970.5123823471799 970.51128993586 61.926 2 0.17403779861883173 0.0005449591280653951 0.001737123386038812 ['ENSG00000155096|ENST00000337198|AZIN1'] 90446 10666 REISNLLVAT True NCI_RA007_Epitope_Rep4 1114.6346227381798 1114.63352993586 47.874 2 0.1740279684568382 0.0005449591280653951 0.0017375172354669886 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 118498 11371 TYQDIQNTI True NCI_RA007_Epitope_Rep1 1094.52440358286 1094.5233099358602 48.204 2 0.1740222895310422 0.0005449591280653951 0.0017377448046688327 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 88146 14543 QRTDVLTGL True PC9_epitope_Rep3 1001.55055876105 1001.54946993586 61.06 2 0.17402204031552862 0.0005449591280653951 0.0017377547920605504 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 135206 7731 WESPSPPKP True H1975_Epitope_Rep3 1023.5025459394699 1023.50144993586 34.72 2 0.17401601726654178 0.0005449591280653951 0.0017379961851590948 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 35904 10580 GTQPWFISK True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 48.668 2 0.1740090040794084 0.0005449591280653951 0.0017382773035337419 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK'] 90225 11023 REEDFYYTEV True H1975_Epitope_Rep1 1349.5775613545297 1349.5764699358601 47.361 2 0.17400396234368307 0.0005449591280653951 0.0017384794258726698 ['ENSG00000186918|ENST00000344423|ZNF395'] 11668 13842 DGQFSVLFTK True NCI_RA007_Epitope_Rep2 1140.5815245361598 1140.5804299358601 58.493 2 0.17400111635607726 0.0005449591280653951 0.001738593531426649 ['CON__P12763'] 129696 10303 VRPPVQVY True PC9_epitope_Rep4 956.5443511817998 956.54324993586 47.317 2 0.17399795243681077 0.0005449591280653951 0.0017387203927684593 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 62926 19074 LLPDLIQKV True PC9_epitope_Rep4 1037.6484818971699 1037.64738993586 81.459 2 0.17399467819014489 0.0005449591280653951 0.0017388516875837148 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 111850 17705 TIMPKDIQL True PC9_epitope_Rep2 1057.58416738845 1057.58306993586 73.385 2 0.1739944092262079 0.0005449591280653951 0.0017388624732753097 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 121231 10536 VETDFSTPTP True H1975_Epitope_Rep2 1092.49752012868 1092.49642993586 45.548 2 0.173994212777498 0.0005449591280653951 0.0017388703510845256 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 71199 18196 LYPDHFHLL True PC9_epitope_Rep2 1153.59202965021 1153.5903749037902 75.297 3 0.17398841147593083 0.0005449591280653951 0.001739103005761359 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 140345 13428 YRDPNTIETL True PC9_epitope_Rep3 1220.60371653272 1220.60260993586 56.692 2 0.17398392989649766 0.0005449591280653951 0.0017392827557999688 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 39718 8346 HLVDEPQNLIK True H1975_Epitope_Rep1 1304.7088503076 1304.7077499358602 37.034 2 0.1739798481824122 0.0005449591280653951 0.0017394464839679406 ['CON__P02769'] 49346 9304 KESDIYIVA True NCI_RA007_Epitope_Rep4 1036.54407639828 1036.5429699358601 42.643 2 0.17396569589196778 0.0005449591280653951 0.0017400142886442988 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 73826 16373 NALDKVLSV True PC9_epitope_Rep6 957.54949613189 957.54838993586 75.365 2 0.17396420927953957 0.0005449591280653951 0.0017400739438555564 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 22428 6710 ETEREYFNRY True H1975_Epitope_Rep2 1405.6262428824498 1405.62514993586 30.722 2 0.1739610934309081 0.0005449591280653951 0.0017401989841687004 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 78581 18422 NYRDTFFNL True PC9_epitope_Rep6 1188.55637241748 1188.55526993586 83.505 2 0.17396068790928115 0.0005449591280653951 0.0017402152585832562 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 17124 5719 EGM[Oxidation]NIVEAM[Oxidation]ER True NCI_RA007_Epitope_Rep1 1309.5642376337298 1309.5631299358602 26.302 2 0.1739505320510994 0.0005449591280653951 0.0017406228836916358 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 90138 6175 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 28.724 2 0.17394565399338924 0.0005449591280653951 0.0017408187079987058 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 75395 20419 NIVDKFVIV True PC9_epitope_Rep2 1045.61718176889 1045.6160899358601 83.969 2 0.17394560165495082 0.0005449591280653951 0.0017408208091878145 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 130771 6817 VTADVINAAEK True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 31.175 2 0.17394430518126394 0.0005449591280653951 0.0017408728584825232 ['ENSG00000092621|ENST00000641023|PHGDH', 'PHGDH|p.H275Qfs*2|1|0.28|ENSG00000092621|chr1:119737144-119737145|-/A|frameshift_variant', 'ENST00000496756.1_1_1:120254528-120263945:+|nuORF'] 115197 17925 TRDQFLDTL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 73.965 2 0.17394379762003404 0.0005449591280653951 0.001740893235875785 ['ENSG00000010292|ENST00000315579|NCAPD2'] 120411 5640 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.4288949679301 26.694 1 0.17393764423898445 0.0005449591280653951 0.001741140298691977 ['ENSG00000171316|ENST00000423902|CHD7'] 38306 7449 HEFLHEVPAA True H1975_Epitope_Rep3 1148.56145779792 1148.56036993586 33.631 2 0.1739341077319282 0.0005449591280653951 0.0017412823079578242 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 9609 20316 AYALLLQHL True PC9_epitope_Rep2 1040.60186605792 1040.6007699358602 83.569 2 0.17393180433174962 0.0005449591280653951 0.0017413748077644913 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF'] 86546 9664 QLDHVNVYY True H1975_Epitope_Rep3 1149.54547338061 1149.54436993586 42.191 2 0.17392452734800642 0.0005449591280653951 0.0017416670687610098 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 101501 20553 SLLDPVPEV True PC9_epitope_Rep4 967.52261267771 967.5220649679301 87.208 1 0.17392391159267012 0.0005449591280653951 0.0017416918012147992 ['ENSG00000089154|ENST00000300648|GCN1'] 133524 20633 VWMRSPLSTF True PC9_epitope_Rep5 1222.61686449906 1222.61576993586 84.417 2 0.17392188032975936 0.0005449591280653951 0.0017417733914960882 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 40766 18231 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.55843490379 75.137 3 0.17392169957330517 0.0005449591280653951 0.0017417806521743736 ['ENSG00000169813|ENST00000682386|HNRNPF'] 87860 11507 QRIAEENIM True PC9_epitope_Rep1 1102.54409348162 1102.54298993586 49.142 2 0.1739197263515944 0.0005449591280653951 0.0017418599150937017 ['ENSG00000071859|ENST00000393600|FAM50A', 'ENST00000481619.5_1_X:153672624-153677371:+|nuORF'] 7276 12743 ARDFTVSAM True PC9_epitope_Rep5 996.4698659121999 996.46876993586 54.022 2 0.17391388595838145 0.0005449591280653951 0.0017420945407153159 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'EIF4A1|p.H293D|1|0.08|ENSG00000161960|chr17:7577677-7577677|C/G|missense_variant'] 74806 9774 NHDTGEYVL True PC9_epitope_Rep4 1046.46688870674 1046.4657899358601 45.236 2 0.17391255379188866 0.0005449591280653951 0.0017421480621578746 ['ENSG00000144597|ENST00000396842|EAF1'] 53329 16986 KQMEQISQFL True PC9_epitope_Rep6 1250.6329084860197 1250.63180993586 77.886 2 0.17390979700903306 0.0005449591280653951 0.0017422588245589797 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 66160 10190 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.4909499358599 44.136 2 0.17390717298283137 0.0005449591280653951 0.001742364259593342 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 140165 16328 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51807496793 67.624 1 0.17389709127673042 0.0005449591280653951 0.0017427694083443786 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 139812 13188 YPITLFVEK True H1975_Epitope_Rep1 1108.61684741572 1108.61574993586 55.823 2 0.17388699416450668 0.0005449591280653951 0.0017431752707371343 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P'] 67998 9220 LTDFQKAVY True H1975_Epitope_Rep3 1083.5600608155898 1083.5589699358602 40.457 2 0.1738852951690154 0.0005449591280653951 0.0017432435726690025 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'ERCC6L2|p.L402Afs*12|1|0.74|ENSG00000182150|chr9:96012835-96012836|-/T|frameshift_variant', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 17792 16909 EHSLVIDTL True PC9_epitope_Rep2 1025.53932537101 1025.53822993586 70.284 2 0.17386705537707334 0.0005449591280653951 0.0017439770059239307 ['ENSG00000143256|ENST00000368010|PFDN2'] 121574 8587 VFEDAAEIR True NCI_RA007_Epitope_Rep1 1048.5189242795998 1048.5178299358602 37.404 2 0.17385850723919094 0.0005449591280653951 0.0017443208381044777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 137416 8106 YEAQDPEIA True H1975_Epitope_Rep2 1034.4556553166997 1034.45507496793 36.128 1 0.17385828048615387 0.0005449591280653951 0.0017443299597271497 ['ENSG00000111678|ENST00000229281|C12orf57'] 118508 16374 TYQDIQNTI True PC9_epitope_Rep1 1094.52440358286 1094.5233099358602 67.805 2 0.17385664942087878 0.0005449591280653951 0.0017443955742002253 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 17313 8643 EHALGTPEV True PC9_epitope_Rep2 951.4661604307499 951.46506993586 38.611 2 0.17385429190554988 0.0005449591280653951 0.001744490416663201 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 118089 20251 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 82.945 2 0.17384368756265303 0.0005449591280653951 0.0017449170915082776 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 78447 12757 NYLVLPNRI True NCI_RA007_Epitope_Rep4 1100.63422881536 1100.63312993586 56.128 2 0.1738427229333675 0.0005449591280653951 0.0017449559093793907 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 36027 17122 GTYTGFIKV True PC9_epitope_Rep5 984.5280324113198 984.52692993586 70.88 2 0.17384112004351954 0.0005449591280653951 0.0017450204135536725 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 105612 9482 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4608749679298 41.441 1 0.1738320597622862 0.0005449591280653951 0.0017453850661208854 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 138862 12458 YKDGTELEL True PC9_epitope_Rep4 1066.51825557326 1066.51714993586 55.726 2 0.17382789503718143 0.0005449591280653951 0.0017455527109775007 ['ENSG00000143815|ENST00000272163|LBR'] 41005 6803 HTFYNELR True NCI_RA007_Epitope_Rep2 1078.5195929859399 1078.51848993586 31.078 2 0.17381773371423442 0.0005449591280653951 0.0017459618076660184 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 67420 5950 LSSPATLNSR True PC9_epitope_Rep6 1044.5563724174801 1044.55526993586 31.187 2 0.17381458315421733 0.0005449591280653951 0.0017460886692699758 ['CON__P00761'] 37512 19808 GVVDPRAISVL True PC9_epitope_Rep3 1124.65535818276 1124.6542699358602 81.425 2 0.1738008528837266 0.0005449591280653951 0.0017466416451119259 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 96361 14309 RYTLQASTF True PC9_epitope_Rep5 1085.5505587610498 1085.54946993586 60.043 2 0.17379809997487294 0.0005449591280653951 0.001746752537446273 ['ENSG00000055130|ENST00000325222|CUL1'] 107647 10550 SVQGIILYR True NCI_RA007_Epitope_Rep2 1047.6076797143498 1047.60658993586 45.634 2 0.17379640019980958 0.0005449591280653951 0.0017468210110945718 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 115472 15880 TRNDYVMMY True PC9_epitope_Rep3 1191.50526544475 1191.50416993586 66.231 2 0.17379602199322233 0.0005449591280653951 0.0017468362471140693 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 141348 5151 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 24.89 2 0.17379551840355567 0.0005449591280653951 0.0017468565343865116 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 55009 9964 KYQKGFSLW True NCI_RA007_Epitope_Rep3 1155.6076797143498 1155.60604490379 46.278 3 0.17378997104519428 0.0005449591280653951 0.0017470800271199398 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 26347 15110 FHSDPQHWL True PC9_epitope_Rep5 1165.53049202281 1165.52884490379 63.126 3 0.17378770823642384 0.0005449591280653951 0.0017471711996884466 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 96353 14594 RYSVFFQSL True NCI_RA007_Epitope_Rep4 1145.58694426977 1145.58584993586 63.519 2 0.1737853722201171 0.0005449591280653951 0.001747265326914527 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 12722 8129 DLEDSLAR True H1975_Epitope_Rep3 917.4454249861699 917.44432993586 36.245 2 0.17378499597688027 0.0005449591280653951 0.0017472804876995152 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 7134 16999 AQWHEQILV True PC9_epitope_Rep5 1122.5821932425 1122.58108993586 70.405 2 0.17377503015974988 0.0005449591280653951 0.0017476821099315165 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 138469 18439 YHQDAFMQL True PC9_epitope_Rep3 1151.5069796969099 1151.50588993586 76.129 2 0.17377190710067786 0.0005449591280653951 0.0017478079881661117 ['ENSG00000170852|ENST00000304056|KBTBD2'] 87778 15255 QRDFNSELL True PC9_epitope_Rep1 1120.5512870370399 1120.55018993586 63.498 2 0.17377063731006528 0.0005449591280653951 0.0017478591710293912 ['ENSG00000042429|ENST00000251871|MED17', 'MED17|p.C601*|1|0.39|ENSG00000042429|chr11:93811909-93811910|TG/-|frameshift_variant', 'MED17|p.H347Ifs*25|1|0.19|ENSG00000042429|chr11:93796435-93796435|C/-|frameshift_variant'] 8009 17048 ATDLAYYLV True H1975_Epitope_Rep2 1027.52261267771 1027.5215099358602 70.833 2 0.1737621000664344 0.0005449591280653951 0.00174820333016596 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 140984 16625 YSHDGAFLAV True PC9_epitope_Rep3 1078.5083595959 1078.5072699358602 69.084 2 0.17375922795147092 0.0005449591280653951 0.001748319128054777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 68068 17351 LTDLVDDNYFY True H1975_Epitope_Rep2 1376.6136125100802 1376.61250993586 72.035 2 0.17375232756250947 0.0005449591280653951 0.0017485973692197058 ['ENSG00000174231|ENST00000304992|PRPF8'] 140800 8816 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 38.877 2 0.1737420585219328 0.0005449591280653951 0.0017490115250225126 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 54831 16049 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 70.814 2 0.17374099229455017 0.0005449591280653951 0.0017490545321597118 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 28274 19847 FRNIPGITL True PC9_epitope_Rep3 1029.5971150306498 1029.5960099358601 81.577 2 0.17373306000307134 0.0005449591280653951 0.0017493745207376506 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 74770 18023 NHDFQALAL True PC9_epitope_Rep5 1027.50869394907 1027.50758993586 74.342 2 0.17372092702617148 0.0005449591280653951 0.0017498640783060483 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 11011 5162 DAPQDFHPDR True NCI_RA007_Epitope_Rep1 1196.52104953792 1196.51941490379 24.162 3 0.17372088503980126 0.0005449591280653951 0.0017498657726663202 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 115104 8054 TRDETNYGI True PC9_epitope_Rep2 1067.4883524273098 1067.48724993586 36.339 2 0.17371740501693234 0.0005449591280653951 0.0017500062147235052 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 27822 16721 FQDENHLYL True PC9_epitope_Rep3 1177.54038800017 1177.53928993586 69.456 2 0.17371628420519544 0.0005449591280653951 0.0017500514493301415 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 31245 11447 GDEELDSLIK True NCI_RA007_Epitope_Rep2 1117.5502839775297 1117.54918993586 49.117 2 0.17371264519376062 0.0005449591280653951 0.0017501983235012973 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 125041 17742 VIDIMENLY True H1975_Epitope_Rep2 1108.54744752656 1108.54634993586 73.566 2 0.1737110976742234 0.0005449591280653951 0.0017502607866896741 ['ENSG00000107968|ENST00000263056|MAP3K8', 'MAP3K8|p.D25H|1|0.5|ENSG00000107968|chr10:30439011-30439011|G/C|missense_variant'] 115327 14995 TRIGLETSL True PC9_epitope_Rep1 988.55530978832 988.55420993586 62.498 2 0.1737019185058745 0.0005449591280653951 0.0017506313352375067 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 88603 12958 QTDQMVFNAY True H1975_Epitope_Rep1 1215.52302368387 1215.52192993586 54.918 2 0.17370153044450187 0.0005449591280653951 0.0017506470023930412 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 2153 8289 AELQRLVAA True H1975_Epitope_Rep1 969.5607295219298 969.55962993586 36.816 2 0.17370051039840756 0.0005449591280653951 0.0017506881852617463 ['ENSG00000150779|ENST00000504148|TIMM8B'] 103399 5808 SPPPPPPPP True NCI_RA007_Epitope_Rep3 881.4647038787699 881.46360993586 29.821 2 0.1737005099604362 0.0005449591280653951 0.0017506882029444076 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 107311 19163 SVLDVDGMKV True PC9_epitope_Rep3 1061.54269649929 1061.5415899358602 78.93 2 0.1736980588263717 0.0005449591280653951 0.0017507871678623058 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 8363 15940 ATLKELTSL True PC9_epitope_Rep4 974.56481184286 974.56370993586 69.239 2 0.17368362830112932 0.0005449591280653951 0.0017513699161013142 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 78449 19505 NYLVLPNRI True PC9_epitope_Rep1 1100.63422881536 1100.63312993586 79.844 2 0.17368191021582213 0.0005449591280653951 0.0017514393105139178 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 133687 19663 VYAQVARLF True PC9_epitope_Rep1 1065.5971150306498 1065.5960099358601 80.458 2 0.1736812306569212 0.0005449591280653951 0.0017514667590321422 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 116487 6428 TTM[Oxidation]YPGIADR True H1975_Epitope_Rep3 1139.5281094447498 1139.5270099358602 29.701 2 0.17367747435653835 0.0005449591280653951 0.0017516184900427075 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 71226 20500 LYPEVFEKF True PC9_epitope_Rep3 1170.5961119711399 1170.5950099358602 84.114 2 0.17367472017021685 0.0005449591280653951 0.001751729750281857 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 3222 6661 AGELTEDEVER True PC9_epitope_Rep6 1246.5677249468197 1246.5666299358602 34.362 2 0.17367263615858103 0.0005449591280653951 0.0017518139423280692 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 115759 6580 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.55557496793 30.221 1 0.17366956016819965 0.0005449591280653951 0.0017519382167537902 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 8382 4355 ATLNVSTTR True NCI_RA007_Epitope_Rep3 961.5192586327701 961.51816993586 23.885 2 0.17366246976541042 0.0005449591280653951 0.0017522247128193692 ['ENST00000460846.1_1_13:111557570-111567134:-|nuORF', 'nc|ENSG00000088448|Q9NXR5-2|ANKRD10', 'ENSG00000088448|ENST00000267339|ANKRD10'] 7157 7318 AQYEDIANR True PC9_epitope_Rep5 1078.5043368446197 1078.5032299358602 33.11 2 0.17365941959436834 0.0005449591280653951 0.0017523479729948587 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 42634 3666 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 19.052 2 0.1736587976841392 0.0005449591280653951 0.0017523731060159553 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 73396 19846 MTISEFDRL True PC9_epitope_Rep1 1110.53794547202 1110.5368499358601 81.155 2 0.17365652378373947 0.0005449591280653951 0.0017524650033579206 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-4|ABLIM3'] 37962 6370 HADVSNQLY True H1975_Epitope_Rep3 1045.48287312405 1045.48176993586 29.486 2 0.1736527178607934 0.0005449591280653951 0.0017526188266071875 ['ENSG00000147416|ENST00000276390|ATP6V1B2'] 21386 11668 ERIGETPEL True PC9_epitope_Rep2 1042.5294889632999 1042.52838993586 50.211 2 0.1736516465830697 0.0005449591280653951 0.0017526621266686028 ['ENSG00000168806|ENST00000305641|LCMT2'] 21880 13100 ESDFSNPLY True H1975_Epitope_Rep3 1070.4556553167 1070.45454993586 55.634 2 0.17364703510212237 0.0005449591280653951 0.0017528485307185305 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 77518 10864 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4608749679298 46.818 1 0.17364308752693286 0.0005449591280653951 0.0017530081143124021 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 13222 10323 DLSLEEIQK True H1975_Epitope_Rep1 1073.5604547384098 1073.5593499358602 44.654 2 0.17362850315177045 0.0005449591280653951 0.0017535978244013232 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2', 'ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 117050 23273 TVIDQIPFL True PC9_epitope_Rep3 1044.58554728744 1044.5844499358602 94.797 2 0.17359770382455858 0.0005449591280653951 0.0017548438284943936 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 105176 14133 SRGDFVVEY True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 59.634 2 0.17359137232692684 0.0005449591280653951 0.0017551000825869055 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 128787 18444 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 75.966 2 0.17358194364188653 0.0005449591280653951 0.0017554817582716967 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 40822 7690 HSDPESDFY True H1975_Epitope_Rep3 1095.41451878071 1095.4134299358602 34.561 2 0.17358156128078212 0.0005449591280653951 0.0017554972381040293 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 73257 5074 MSEEHTAVY True H1975_Epitope_Rep2 1065.44371073401 1065.4426099358602 24.599 2 0.1735809502004698 0.0005449591280653951 0.0017555219778830973 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 115562 9290 TRSPVKVTL True PC9_epitope_Rep3 999.60767971435 999.60658993586 40.675 2 0.17357976117803145 0.0005449591280653951 0.0017555701168315127 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 8216 14175 [Acetylation]-ATFVELSTK True H1975_Epitope_Rep1 1036.54407671458 1036.5429699358601 59.699 2 0.17357354195370464 0.0005449591280653951 0.0017558219308521014 ['nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000198074|ENST00000359579|AKR1B10', 'AKR1B10|p.T244Nfs*29|1|0.24|ENSG00000198074|chr7:134537643-134537644|-/A|frameshift_variant'] 82969 11443 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.47547496793 48.995 1 0.17356545133888507 0.0005449591280653951 0.0017561495708720656 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 104985 16039 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.59957490379 66.508 3 0.17356292587850622 0.0005449591280653951 0.0017562518552229343 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 111399 9127 THSLETQEL True PC9_epitope_Rep1 1056.5087535187201 1056.5076499358602 39.959 2 0.17356207943595142 0.0005449591280653951 0.0017562861385550558 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 132316 19846 VTYGFPIML True H1975_Epitope_Rep3 1039.5412399473098 1039.54067496793 83.09 1 0.1735588100453504 0.0005449591280653951 0.0017564185644688317 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF', 'CLCN7|p.N576I|1|0.15|ENSG00000103249|chr16:1449036-1449036|T/A|missense_variant'] 142106 14047 YVPETVYRV True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 59.045 2 0.17355084372772597 0.0005449591280653951 0.001756741280180371 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 108786 13783 SYTHIQYLF True NCI_RA007_Epitope_Rep5 1170.5709598524602 1170.5698699358602 59.693 2 0.17354473109213756 0.0005449591280653951 0.0017569889434328094 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 26396 16493 FHYEADGANVL True PC9_epitope_Rep1 1234.5618517207397 1234.56074993586 68.265 2 0.1735379114343633 0.0005449591280653951 0.0017572652940728956 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 58564 8358 LEQLTGQTP True H1975_Epitope_Rep2 985.50802524273 985.5074749679301 37.101 1 0.17353189576256994 0.0005449591280653951 0.0017575091011837506 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 106010 9914 SSVPGVRLLQ True NCI_RA007_Epitope_Rep3 1054.61349337078 1054.6123899358602 46.081 2 0.17353024993987046 0.0005449591280653951 0.001757575810069623 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 23852 20046 EYIPKWEQF True PC9_epitope_Rep1 1238.5971746003 1238.5960699358602 81.933 2 0.17352810631965293 0.0005449591280653951 0.0017576626996059447 ['ENSG00000114405|ENST00000462069|C3orf14'] 101261 23169 SLIADLEQL True PC9_epitope_Rep1 1000.5440763982799 1000.54357496793 93.914 1 0.1735265850149668 0.0005449591280653951 0.0017577243668031063 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 26932 12076 FLDPRPLTV True H1975_Epitope_Rep1 1056.59678067748 1056.59568993586 51.463 2 0.17352177340666824 0.0005449591280653951 0.0017579194231192052 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 13201 9249 DLSELGSVR True H1975_Epitope_Rep1 974.5032742154599 974.50216993586 40.487 2 0.17352145909756742 0.0005449591280653951 0.0017579321655535188 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 134673 19286 VYSRTFTWL True PC9_epitope_Rep4 1171.6025943339098 1171.6014899358602 82.289 2 0.1735165607095823 0.0005449591280653951 0.0017581307635024788 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 108246 20954 SYIDVLPEF True PC9_epitope_Rep6 1081.53317736141 1081.53267496793 93.389 1 0.1735128550142047 0.0005449591280653951 0.0017582810204022543 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 77846 10862 NVELDPEIQ True NCI_RA007_Epitope_Rep4 1055.51350454599 1055.5124099358602 48.631 2 0.17350467299845637 0.0005449591280653951 0.0017586128266888785 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 138593 5670 YIDQEELNK True H1975_Epitope_Rep1 1150.5506183307 1150.5495299358602 26.88 2 0.17350453147993777 0.0005449591280653951 0.0017586185662580762 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 60906 11358 LHYPSTTAL True PC9_epitope_Rep6 1001.51819600361 1001.51708993586 54.731 2 0.1735001836462442 0.0005449591280653951 0.0017587949105678832 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 80095 15661 PFLQASPHF True PC9_epitope_Rep6 1042.5236157372199 1042.5225099358602 72.446 2 0.17349314742349636 0.0005449591280653951 0.001759080331074353 ['ENSG00000147689|ENST00000690554|FAM83A'] 105142 9099 SRFLNKQPY True PC9_epitope_Rep5 1151.60874234351 1151.60710490379 39.945 3 0.17349250168925262 0.0005449591280653951 0.0017591065272514765 ['ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENST00000484855.2_1_20:44526619-44527086:+|nuORF'] 93703 9143 RQVGVTEML True NCI_RA007_Epitope_Rep3 1031.54336520563 1031.54226993586 43.048 2 0.1734899217070818 0.0005449591280653951 0.0017592111959863423 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 37914 9986 GYSFTTTAER True PC9_epitope_Rep3 1131.51965255559 1131.5185499358602 43.366 2 0.17348753652593712 0.0005449591280653951 0.0017593079672755462 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 140902 13907 YSEEIVEMY True H1975_Epitope_Rep2 1161.4899922200898 1161.48888993586 58.64 2 0.17348652024269506 0.0005449591280653951 0.0017593492014187065 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 121930 12113 VFSEPRAVFY True H1975_Epitope_Rep2 1213.6131590176099 1213.61206993586 51.676 2 0.17347899353970417 0.0005449591280653951 0.0017596546160322084 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 811 9668 AAYYHPSYL True H1975_Epitope_Rep2 1083.5025459394699 1083.5014499358601 42.169 2 0.173473870479935 0.0005449591280653951 0.0017598625272236877 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 104421 18161 SQLELGVHL True PC9_epitope_Rep2 994.54474510462 994.54364993586 75.16 2 0.1734676316033153 0.0005449591280653951 0.0017601157552653726 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 84880 5484 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 26.147 1 0.17346732952543198 0.0005449591280653951 0.0017601280171469279 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 75398 20724 NIVDKFVIV True PC9_epitope_Rep5 1045.61718176889 1045.6160899358601 84.772 2 0.17346659818606963 0.0005449591280653951 0.0017601577038737564 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 70515 14966 LVVYPWTQRF True NCI_RA007_Epitope_Rep4 1307.7026427283497 1307.7015499358602 65.032 2 0.17346584054798891 0.0005449591280653951 0.001760188458653888 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'HBE1|p.G73Efs*17|1|0.07|ENSG00000213931|chr11:5269551-5269551|C/-|frameshift_variant', 'ENSG00000213934|ENST00000330597|HBG1', 'ENSG00000213931|ENST00000396895|HBE1', 'ENSG00000196565|ENST00000336906|HBG2', 'CON__Q3SX09'] 107648 9611 SVQGIILYR True NCI_RA007_Epitope_Rep3 1047.6076797143498 1047.60658993586 44.887 2 0.17346238289270094 0.0005449591280653951 0.0017603288219815352 ['SLC25A31|p.V198L|1|0.57|ENSG00000151475|chr4:127767179-127767179|G/T|missense_variant'] 92113 11735 RLASYLDKV True PC9_epitope_Rep2 1063.60259433391 1063.6014899358602 50.471 2 0.17345440912116647 0.0005449591280653951 0.0017606525595147045 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 43654 13125 IHDGAAPISL True PC9_epitope_Rep2 992.52909504048 992.52798993586 55.759 2 0.17345026161031404 0.0005449591280653951 0.0017608209732687574 ['ENSG00000142798|ENST00000374695|HSPG2'] 29027 12990 FTEQWTDGY True H1975_Epitope_Rep1 1145.4665543535698 1145.46597496793 55.046 1 0.17345003309916301 0.0005449591280653951 0.0017608302526572893 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 139124 20450 YLDPSVLSGV True PC9_epitope_Rep4 1048.54407639828 1048.54357496793 86.807 1 0.1734311691681342 0.0005449591280653951 0.0017615964486391892 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 4626 9268 ALAAGGYDVEK True PC9_epitope_Rep3 1092.54513902744 1092.5440499358601 40.593 2 0.17342527558673576 0.0005449591280653951 0.0017618358965522118 ['ENSG00000184357|ENST00000331442|H1-5'] 112439 8663 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.51257496793 38.319 1 0.17341573954669692 0.0005449591280653951 0.001762223401436578 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 118954 12764 VADTVARVL True PC9_epitope_Rep3 942.5498304850598 942.54872993586 54.116 2 0.17340319749953476 0.0005449591280653951 0.0017627331878030642 ['ENSG00000145632|ENST00000274289|PLK2'] 118169 18760 TYIQKIFRM True PC9_epitope_Rep5 1198.65325000778 1198.65160490379 77.171 3 0.1734031261037054 0.0005449591280653951 0.0017627360901936468 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 53837 13976 KTFSEILNRV True PC9_epitope_Rep4 1205.67682190333 1205.67572993586 61.664 2 0.17340203954144337 0.0005449591280653951 0.0017627802618246054 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 73321 8540 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 37.837 2 0.17340090197926136 0.0005449591280653951 0.0017628265079244368 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 90613 5018 REMPVKVEA True H1975_Epitope_Rep3 1057.5590152697698 1057.5579099358602 24.426 2 0.17339399460447957 0.0005449591280653951 0.0017631073442711729 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 133873 14407 VYGSFASKL True PC9_epitope_Rep1 970.5123823471799 970.51128993586 60.24 2 0.17339373425049637 0.0005449591280653951 0.001763117930479834 ['ENSG00000155096|ENST00000337198|AZIN1'] 85063 9282 QEISHLIEP True NCI_RA007_Epitope_Rep3 1064.55022440788 1064.54912993586 43.618 2 0.1733894808732941 0.0005449591280653951 0.001763290885331295 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 129288 19269 VQVPVPVTV True PC9_epitope_Rep4 936.5644179200399 936.56386496793 82.221 1 0.17338176022175475 0.0005449591280653951 0.0017636048731675808 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 43432 8977 IGGIGTVPVGR True NCI_RA007_Epitope_Rep1 1024.6029286870798 1024.60182993586 38.92 2 0.173379884235622 0.0005449591280653951 0.0017636811752868966 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 45567 17446 IQSDKFLNL True PC9_epitope_Rep2 1076.5866099166 1076.58550993586 72.359 2 0.17337934663942856 0.0005449591280653951 0.0017637030415847974 ['ENSG00000136052|ENST00000258538|SLC41A2'] 17549 19091 EHGNFLITV True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 78.463 2 0.17337799472766102 0.0005449591280653951 0.0017637580307207257 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 11989 16393 DHQLIQEAL True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 68.054 2 0.1733776545160197 0.0005449591280653951 0.001763771869130912 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 69715 8580 LVEIAQVPK True H1975_Epitope_Rep3 995.60153170475 995.60042993586 37.993 2 0.1733723571219624 0.0005449591280653951 0.0017639873593531972 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2', 'UGP2|p.I366Nfs*2|1|0.17|ENSG00000169764|chr2:63887424-63887427|TCAT/-|frameshift_variant'] 75722 20089 NLLAHFINA True PC9_epitope_Rep2 1011.55016483823 1011.54906993586 82.68 2 0.17337084450719337 0.0005449591280653951 0.0017640488951405685 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 126316 19392 VLIGEFLEKV True PC9_epitope_Rep6 1145.66961126457 1145.6685099358601 87.244 2 0.17336962229057293 0.0005449591280653951 0.0017640986185980697 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 27547 6220 FNDPNAKEM True PC9_epitope_Rep4 1064.45969515132 1064.4585899358601 30.971 2 0.17336404479800965 0.0005449591280653951 0.0017643255456229537 ['ENSG00000056097|ENST00000265069|ZFR'] 35846 10075 GTLSSWNLK True NCI_RA007_Epitope_Rep1 1004.52909504048 1004.52798993586 43.199 2 0.17335850882586545 0.0005449591280653951 0.0017645508122332574 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 104566 10423 SQQKQLLEV True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 45.413 2 0.1733567025994071 0.0005449591280653951 0.0017646243163953988 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 104151 14134 SQESKVLYL True PC9_epitope_Rep5 1065.57062549929 1065.5695299358601 59.378 2 0.17335332558195374 0.0005449591280653951 0.0017647617519246088 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 5069 20839 ALLDVFREA True PC9_epitope_Rep5 1032.56039516876 1032.55928993586 85.207 2 0.1733480767785388 0.0005449591280653951 0.0017649753853774856 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 139071 10411 YLDDPDLKY True H1975_Epitope_Rep3 1140.5339056374 1140.5333749679298 45.105 1 0.1733471684293563 0.0005449591280653951 0.001765012359054738 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 115105 8149 TRDETNYGI True PC9_epitope_Rep2 1067.4883524273098 1067.48724993586 36.701 2 0.17334624982338864 0.0005449591280653951 0.001765049751015267 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 141374 7232 YTEEDAASY True H1975_Epitope_Rep3 1047.40328539067 1047.4021899358602 32.789 2 0.17334604172545345 0.0005449591280653951 0.0017650582217755763 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 105658 14747 SSEELPLYY True H1975_Epitope_Rep2 1099.5073565363898 1099.50624993586 61.885 2 0.17334515953903376 0.0005449591280653951 0.0017650941321931484 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 7586 3256 ASFDKAKLK True NCI_RA007_Epitope_Rep4 1006.58113061334 1006.58002993586 18.184 2 0.17334001592160028 0.0005449591280653951 0.0017653035236471024 ['ENSG00000034510|ENST00000233143|TMSB10'] 35616 9638 GTDDGRLLEY True H1975_Epitope_Rep2 1137.5302172392899 1137.52912993586 42.051 2 0.1733380745838158 0.0005449591280653951 0.0017653825600041785 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 72207 16585 MHAETAFESL True PC9_epitope_Rep3 1134.5015599633 1134.50046993586 68.932 2 0.17333637157362058 0.0005449591280653951 0.0017654518964096346 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 53897 17734 KTMEDTLMTV True PC9_epitope_Rep3 1167.55154693083 1167.5504499358601 73.411 2 0.17333469022528308 0.0005449591280653951 0.0017655203535476653 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 41587 10244 IAAPFTSKL True H1975_Epitope_Rep1 946.5487678559 946.54766993586 44.347 2 0.17332699752169223 0.0005449591280653951 0.0017658336006256016 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19758004-19758388:-|nuORF'] 10175 15984 AYVPGFAHI True PC9_epitope_Rep6 973.5021520166499 973.50104993586 73.791 2 0.1733200488294732 0.0005449591280653951 0.0017661165993628914 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF'] 53144 15893 KPYNVYITV True PC9_epitope_Rep2 1095.59644632431 1095.5953499358602 66.385 2 0.17331761479503327 0.0005449591280653951 0.0017662157407915707 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 92373 18673 RLPETLPSL True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 76.846 2 0.1733050478853228 0.0005449591280653951 0.001766727696211492 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 72494 7677 M[Oxidation]LDSHEELY True H1975_Epitope_Rep1 1151.48049054599 1151.4793899358601 34.497 2 0.17330413987219814 0.0005449591280653951 0.0017667646929397757 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 62620 20870 LLLDVPTAAV True PC9_epitope_Rep4 1010.6011973515799 1010.60010993586 88.432 2 0.1733040231706947 0.0005449591280653951 0.0017667694479645225 ['ENSG00000216490|ENST00000407280|IFI30'] 23912 13501 EYLDDRNTF True PC9_epitope_Rep2 1171.51456717515 1171.51346993586 57.22 2 0.17330173552140238 0.0005449591280653951 0.0017668626612527502 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.H214R|1|0.61|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant'] 83284 16951 PTDAFTVFY True H1975_Epitope_Rep3 1059.49131254943 1059.49020993586 70.784 2 0.17329374986021837 0.0005449591280653951 0.0017671880861376528 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 133342 18123 VVVDPIQSV True PC9_epitope_Rep4 954.53859709502 954.53750993586 77.774 2 0.17328572758909236 0.0005449591280653951 0.00176751506332804 ['ENSG00000115233|ENST00000409682|PSMD14'] 8291 14202 ATIIDILTK True NCI_RA007_Epitope_Rep3 986.60119735158 986.60010993586 63.168 2 0.173283947018467 0.0005449591280653951 0.001767587645250016 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 86167 12247 QIEEAGWSY True H1975_Epitope_Rep3 1081.4716397340098 1081.47107496793 52.284 1 0.17328352392437799 0.0005449591280653951 0.0017676048923969733 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 105290 13290 SRMDGEGQLTL True PC9_epitope_Rep2 1205.5710365054497 1205.56992993586 56.398 2 0.17328350892786953 0.0005449591280653951 0.0017676055037226818 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 111118 6906 THEEAVTAL True PC9_epitope_Rep6 969.4767251144499 969.47562993586 35.484 2 0.1732833003223002 0.0005449591280653951 0.0017676140074538407 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 26710 17343 FIVHTIEEI True PC9_epitope_Rep6 1099.5913609438699 1099.59026993586 79.324 2 0.1732798083736556 0.0005449591280653951 0.001767756361567113 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 137079 8110 YAQARFDAY True H1975_Epitope_Rep2 1103.50360856863 1103.5025099358602 36.145 2 0.17327094356126782 0.0005449591280653951 0.001768117799443494 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000525155.5_1_11:67821457-67828962:-|nuORF'] 73588 8166 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep4 1074.57433136118 1074.5732299358601 38.866 2 0.1732571120808472 0.0005449591280653951 0.001768681887038109 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 179 9906 AAEEGLREL True PC9_epitope_Rep2 986.5032742154599 986.50216993586 43.434 2 0.17324629952289491 0.0005449591280653951 0.0017691229797291172 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 54938 20929 KYPSPFFVF True PC9_epitope_Rep4 1130.5800679841798 1130.5789699358602 88.663 2 0.1732383324836471 0.0005449591280653951 0.0017694480614158703 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 28503 10574 FSDYLHPQY True H1975_Epitope_Rep3 1168.5189242796 1168.5178299358602 45.742 2 0.17323369011693823 0.0005449591280653951 0.0017696375129807114 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 35393 15138 GSDEPAFMYY True H1975_Epitope_Rep1 1178.45902644498 1178.4579299358602 63.485 2 0.17323063262228577 0.0005449591280653951 0.001769762298174018 ['ENSG00000155096|ENST00000337198|AZIN1'] 76974 18945 NRFEDILSL True PC9_epitope_Rep6 1105.5767735088898 1105.57566993586 85.517 2 0.17321905645955743 0.0005449591280653951 0.0017702348346380766 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 17238 14176 EHAEALLL True PC9_epitope_Rep4 894.4810822188999 894.47998993586 62.431 2 0.17321311258481398 0.0005449591280653951 0.0017704775113897492 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 7469 5477 ASATVAIPK True NCI_RA007_Epitope_Rep5 856.50181766348 856.50072993586 27.754 2 0.17319704362894997 0.0005449591280653951 0.0017711337420625907 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 118645 13228 TYSPALNKM[Oxidation]F True PC9_epitope_Rep1 1186.5692459807399 1186.5681499358602 55.747 2 0.1731967417056972 0.0005449591280653951 0.0017711460744593318 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 3903 17109 AHDDAIWSV True PC9_epitope_Rep3 1012.46140940348 1012.46030993586 70.962 2 0.17319584909069757 0.0005449591280653951 0.0017711825348312473 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 2134 10995 AELNEFLTR True NCI_RA007_Epitope_Rep5 1091.56112344475 1091.56002993586 48.928 2 0.17319564505234708 0.0005449591280653951 0.0017711908692288442 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 138428 18048 YHISLEHEIL True PC9_epitope_Rep1 1252.64518742188 1252.6435349037902 74.214 3 0.17319314855955784 0.0005449591280653951 0.0017712928471756255 ['ENSG00000168002|ENST00000301788|POLR2G'] 101518 20622 SLLENLEKI True PC9_epitope_Rep2 1057.60192562757 1057.60082993586 84.756 2 0.17318010188480107 0.0005449591280653951 0.0017718258796843413 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 78614 20130 NYSPYVNYF True PC9_epitope_Rep4 1165.50802524273 1165.50747496793 85.565 1 0.17317708289447983 0.0005449591280653951 0.0017719492458624483 ['ENSG00000156162|ENST00000414645|DPY19L4'] 108276 17654 SYIELPAYL True NCI_RA007_Epitope_Rep3 1067.55391280599 1067.55280993586 77.412 2 0.1731690633535667 0.0005449591280653951 0.0017722769932428913 ['ENSG00000162511|ENST00000294507|LAPTM5'] 95621 17811 RYALQLQQI True PC9_epitope_Rep5 1131.64004247179 1131.6389499358602 73.529 2 0.17316476425572414 0.0005449591280653951 0.001772452716319677 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1'] 103070 5906 SPGLQKEAV True PC9_epitope_Rep3 927.5025459394699 927.50144993586 27.779 2 0.17316386868538108 0.0005449591280653951 0.0017724893244215677 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 73308 8643 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46340993586 38.174 2 0.1731630623537502 0.0005449591280653951 0.0017725222853727243 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 135408 16588 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.55560993586 68.631 2 0.17315989552177477 0.0005449591280653951 0.0017726517439936153 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 106411 3278 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 18.298 3 0.1731496597185608 0.0005449591280653951 0.001773070243611039 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 111852 16991 TIMPKDIQL True PC9_epitope_Rep4 1057.58416738845 1057.58306993586 73.347 2 0.1731402314535892 0.0005449591280653951 0.0017734558138318645 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 1905 6904 AEIHVPEEQA True H1975_Epitope_Rep1 1121.53530261973 1121.5342099358602 31.597 2 0.1731330979931462 0.0005449591280653951 0.0017737475934680059 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C'] 89112 4617 QVQAAQFAK True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 25.075 2 0.17313250219268042 0.0005449591280653951 0.0017737719656438185 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 35730 6739 GTGIVSAPVPK True NCI_RA007_Epitope_Rep5 1024.59169529704 1024.5905899358602 32.596 2 0.17313230631362578 0.0005449591280653951 0.001773779978464645 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 91537 7766 RIGEPLVLK True NCI_RA007_Epitope_Rep4 1023.6440652230699 1023.6429699358599 36.553 2 0.17312303379218633 0.0005449591280653951 0.0017741593307809165 ['nc|ENSG00000204305|Q15109-3|AGER', 'nc|ENSG00000204305|Q15109-4|AGER', 'nc|ENSG00000204305|Q15109-10|AGER', 'nc|ENSG00000204305|Q15109-7|AGER', 'ENSG00000204305|ENST00000375076|AGER', 'nc|ENSG00000204305|Q15109-6|AGER', 'nc|ENSG00000204305|Q15109-5|AGER', 'nc|ENSG00000204305|Q15109-8|AGER', 'nc|ENSG00000204305|Q15109-2|AGER', 'nc|ENSG00000204305|Q15109-9|AGER'] 53655 11563 KSDEMELLY True H1975_Epitope_Rep2 1126.5216267015398 1126.5205299358602 49.541 2 0.17312038066308283 0.0005449591280653951 0.0017742678890861822 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000493082.5_1_5:850626-880074:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-2|BRD9', 'ENST00000495794.5_1_5:864585-881375:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-3|BRD9', 'nc|ENSG00000028310|Q9H8M2-1|BRD9', 'ENST00000495265.5_1_5:864585-889814:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-6|BRD9'] 70829 6308 LYDATYETK True NCI_RA007_Epitope_Rep2 1102.5182555732601 1102.51714993586 29.142 2 0.17311801400031626 0.0005449591280653951 0.0017743647316350519 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 96001 19696 RYLNEFEEL True PC9_epitope_Rep1 1211.5822528121498 1211.5811499358601 80.586 2 0.1731055981855709 0.0005449591280653951 0.0017748728666894206 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 40846 13271 HSDTIQWLY True H1975_Epitope_Rep1 1161.54547338061 1161.54436993586 56.147 2 0.17309532565362487 0.0005449591280653951 0.0017752933949228094 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 4474 21359 AIVDLIHDI True PC9_epitope_Rep2 1007.5651461960299 1007.56404993586 87.626 2 0.17309218634209783 0.0005449591280653951 0.001775421929300532 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 78441 17780 NYLSIFRKF True PC9_epitope_Rep6 1186.6498788795 1186.6487899358601 81.026 2 0.1730908088619207 0.0005449591280653951 0.001775478331089972 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 98977 7980 SHDDGNIDL True PC9_epitope_Rep4 984.41485313388 984.41374993586 38.14 2 0.1730890863244275 0.0005449591280653951 0.0017755488639911486 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 140986 16404 YSHDGAFLAV True PC9_epitope_Rep5 1078.5083595959 1078.5072699358602 68.096 2 0.173084152419372 0.0005449591280653951 0.0017757509085773047 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 111018 8765 THDDSHLVSL True PC9_epitope_Rep4 1122.5305515924601 1122.5289149037899 41.222 3 0.17308283530953256 0.0005449591280653951 0.0017758048484301401 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 11936 18229 DHMRFISEL True PC9_epitope_Rep5 1146.54917886206 1146.54754490379 75.13 3 0.1730805021006384 0.0005449591280653951 0.00177590040480901 ['ENSG00000273749|ENST00000617928|CYFIP1'] 74961 14122 NHNIYITEV True PC9_epitope_Rep1 1101.54547338061 1101.54436993586 59.147 2 0.17307432274028248 0.0005449591280653951 0.001776153504871571 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 107386 19983 SVLKSLVEI True PC9_epitope_Rep5 986.6011973515799 986.60010993586 81.918 2 0.17306761027324993 0.0005449591280653951 0.001776428481331533 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 98306 9196 SEVQYIQEA True H1975_Epitope_Rep1 1065.4978544818498 1065.4967499358602 40.279 2 0.1730638638876361 0.0005449591280653951 0.0017765819706836122 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 34666 12225 GQDEPLIHV True PC9_epitope_Rep6 1006.5083595958998 1006.50726993586 58.397 2 0.17306344760588746 0.0005449591280653951 0.0017765990265588764 ['ENSG00000157778|ENST00000288607|PSMG3'] 10158 7364 AYVHM[Oxidation]VTHF True PC9_epitope_Rep4 1119.5171508382302 1119.51604993586 35.662 2 0.17305940931873542 0.0005449591280653951 0.0017767644915677907 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 142681 13537 YYPSTPGRYSI True PC9_epitope_Rep4 1302.6244519773 1302.62334993586 59.966 2 0.17305856715548248 0.0005449591280653951 0.0017767990003568976 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 23848 20290 EYIPDLYNHF True PC9_epitope_Rep2 1309.5979028762897 1309.5968099358602 83.467 2 0.17305189978718316 0.0005449591280653951 0.0017770722285567536 ['ENSG00000011454|ENST00000373647|RABGAP1', 'ENST00000474707.1_1_9:125835857-125839047:+|nuORF'] 116602 23067 TVADVVLWSV True PC9_epitope_Rep1 1087.59136094387 1087.59026993586 93.527 2 0.17304954837609224 0.0005449591280653951 0.0017771685992190552 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 23772 20657 EYGPVYSTW True PC9_epitope_Rep5 1100.48147614172 1100.48097496793 84.51 1 0.1730486272891177 0.0005449591280653951 0.0017772063506419646 ['ENSG00000148158|ENST00000374232|SNX30'] 134233 16573 VYMELSQKL True PC9_epitope_Rep3 1109.57908200801 1109.5779899358602 68.887 2 0.17303638564680396 0.0005449591280653951 0.0017777081595310418 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 42598 6860 IEGEGSVLQAK True NCI_RA007_Epitope_Rep1 1129.59790287629 1129.5968099358602 30.688 2 0.17303447801617555 0.0005449591280653951 0.0017777863698168522 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 141070 10361 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.52184993586 44.908 2 0.17303190199898513 0.0005449591280653951 0.0017778919885167723 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 14960 9192 DYFEQYGK True NCI_RA007_Epitope_Rep2 1048.4501760134401 1048.44906993586 40.362 2 0.1730309432141683 0.0005449591280653951 0.0017779313010406609 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 120633 15958 VEIFPIFKA True H1975_Epitope_Rep2 1062.6113681124598 1062.61026993586 66.58 2 0.17303015099200944 0.0005449591280653951 0.001777963784744421 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 126159 17838 VLFGVETHV True PC9_epitope_Rep5 999.53893144819 999.53782993586 73.632 2 0.17302885678401977 0.0005449591280653951 0.0017780168527896224 ['ENSG00000066583|ENST00000173527|ISOC1', 'ISOC1|p.A234Cfs*2|1|0.33|ENSG00000066583|chr5:129107009-129107010|-/T|frameshift_variant', 'ISOC1|p.V205I|1|0.11|ENSG00000066583|chr5:129105368-129105368|G/A|missense_variant'] 40503 13508 HRDSGILGL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 56.978 2 0.173028682483922 0.0005449591280653951 0.0017780239999578653 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 4434 10345 AIRLELQGPR True PC9_epitope_Rep4 1151.6774906096698 1151.67583490379 47.485 3 0.1730238948013376 0.0005449591280653951 0.0017782203299261691 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 71144 21692 LYLPSFFTY True PC9_epitope_Rep6 1149.57464825057 1149.57354993586 96.325 2 0.17302098395605542 0.0005449591280653951 0.0017783397064581002 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 8420 16494 ATMKDFTSL True PC9_epitope_Rep5 1012.48993265044 1012.4888299358599 68.443 2 0.17302082607551425 0.0005449591280653951 0.0017783461815184967 ['ENSG00000162063|ENST00000397066|CCNF'] 53995 5346 KVFAGYYTK True NCI_RA007_Epitope_Rep5 1075.57023157647 1075.56912993586 27.255 2 0.17302010946206883 0.0005449591280653951 0.001778375571854631 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 115336 15018 TRIGLETSL True PC9_epitope_Rep5 988.55530978832 988.55420993586 62.769 2 0.17301845950825553 0.0005449591280653951 0.0017784432429568803 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 1795 10742 AEHGIFLPP True H1975_Epitope_Rep3 979.51271670035 979.51160993586 46.399 2 0.1730180617522074 0.0005449591280653951 0.0017784595568840556 ['ENSG00000159079|ENST00000290155|CFAP298'] 22418 11607 ETELISTTANY True H1975_Epitope_Rep2 1240.5823123818 1240.5812099358602 49.714 2 0.173016549067194 0.0005449591280653951 0.0017785216008866862 ['ENSG00000113141|ENST00000417647|IK'] 116267 12105 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.49807496793 51.645 1 0.17301056574058093 0.0005449591280653951 0.0017787670331134847 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 107725 4948 SVSEVVVNR True NCI_RA007_Epitope_Rep3 987.53490869691 987.53380993586 26.458 2 0.17300786994478468 0.0005449591280653951 0.0017788776240084845 ['ENST00000578759.1_1_17:60217316-60217976:-|nuORF', 'ENSG00000099821|ENST00000588649|POLRMT'] 139616 14147 YLYPDITRL True H1975_Epitope_Rep3 1152.6179100448799 1152.6168099358601 59.748 2 0.17300428391857786 0.0005449591280653951 0.001779024745909407 ['ENSG00000131389|ENST00000622186|SLC6A6'] 97651 9105 SEGFAVIKEA True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 40.01 2 0.17300413689242297 0.0005449591280653951 0.0017790307781295122 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 57662 4732 LEEERTPTP True H1975_Epitope_Rep3 1070.52440358286 1070.5233099358602 23.327 2 0.1729999464045185 0.0005449591280653951 0.0017792027149588128 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 95138 20733 RVFSDIIYTV True PC9_epitope_Rep1 1211.65502382959 1211.65392993586 84.576 2 0.17299803009942877 0.0005449591280653951 0.0017792813470064752 ['ENSG00000125676|ENST00000245838|THOC2'] 71305 20051 LYQEIIHYF True PC9_epitope_Rep4 1224.61791004488 1224.6168099358601 85.264 2 0.17299112158647356 0.0005449591280653951 0.0017795648539782407 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 74869 13506 NHHLFTTTI True PC9_epitope_Rep5 1082.5508931142201 1082.5497899358602 56.97 2 0.17298155811706623 0.0005449591280653951 0.0017799573879110492 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 23747 16964 EYGIFNQKI True PC9_epitope_Rep4 1110.57095985246 1110.5698699358602 73.243 2 0.17298143979309427 0.0005449591280653951 0.0017799622450776615 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 54802 15157 KYPDIISRI True PC9_epitope_Rep2 1103.63389446219 1103.63278993586 63.56 2 0.17297997655543412 0.0005449591280653951 0.0017800223116789477 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 857 7116 ADEGISFR True NCI_RA007_Epitope_Rep4 893.42429561877 893.42318993586 33.993 2 0.1729738759333669 0.0005449591280653951 0.0017802727669776544 ['ENSG00000117450|ENST00000319248|PRDX1'] 141382 8933 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43348993586 39.32 2 0.17297154118168903 0.0005449591280653951 0.0017803686273431887 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 69678 18623 LVDTFLEDVK True PC9_epitope_Rep4 1177.6230549949698 1177.6219499358601 79.71 2 0.17297070787232943 0.0005449591280653951 0.0017804028426567252 ['CON__P34955'] 42385 6066 IEDEVTRQV True H1975_Epitope_Rep1 1087.55095268387 1087.54984993586 28.4 2 0.17296427498239758 0.0005449591280653951 0.0017806669964227488 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 13984 15400 DRDPEFYKF True PC9_epitope_Rep3 1215.5560380643099 1215.55438490379 64.392 3 0.1729630129103607 0.0005449591280653951 0.0017807188254909284 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 90251 7518 REEEVTGPVIA True H1975_Epitope_Rep1 1198.61936659686 1198.61826993586 33.915 2 0.17296234025149382 0.0005449591280653951 0.0017807464499527321 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 116594 4370 TVADHIQKV True PC9_epitope_Rep4 1009.5556441414899 1009.55454993586 23.251 2 0.17295805188425545 0.0005449591280653951 0.001780922572837707 ['ENSG00000181789|ENST00000314797|COPG1'] 47384 16926 IVIRGLNTI True PC9_epitope_Rep2 997.62841515893 997.62730993586 70.349 2 0.172958049541833 0.0005449591280653951 0.0017809226690455656 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 140194 13301 YQTQLIQRV True PC9_epitope_Rep3 1147.6349570913499 1147.63386993586 56.196 2 0.1729534152828949 0.0005449591280653951 0.0017811130172854265 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 77934 6177 NVKVDPEIQ True NCI_RA007_Epitope_Rep5 1040.5502244078798 1040.54912993586 30.439 2 0.1729453965330743 0.0005449591280653951 0.0017814424287091043 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 21582 4396 ERQPGAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 23.354 2 0.17294470764740427 0.0005449591280653951 0.0017814707310780955 ['ENSG00000180921|ENST00000388913|FAM83H'] 37676 9074 GVYGDVQRV True PC9_epitope_Rep2 991.5086939490699 991.50758993586 40.247 2 0.17294243080983354 0.0005449591280653951 0.0017815642765031594 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 28947 9363 FTDQQKLIY True H1975_Epitope_Rep1 1154.5971746002997 1154.5960699358602 40.922 2 0.17293976911347145 0.0005449591280653951 0.001781673640347648 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 4020 21411 AHFDGLIFV True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 87.421 2 0.17293422835338362 0.0005449591280653951 0.0017819013207855572 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11', 'FBXO11|p.S292F|1|0.25|ENSG00000138081|chr2:47834638-47834638|G/A|missense_variant'] 115541 6333 TRSITNTTV True PC9_epitope_Rep1 991.52982331647 991.52872993586 29.171 2 0.17292870377158015 0.0005449591280653951 0.0017821283654211207 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 125924 20367 VLDDKLVFV True PC9_epitope_Rep3 1046.60119735158 1046.60010993586 83.59 2 0.17292421864134772 0.0005449591280653951 0.001782312712842615 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 117869 8962 TVYSGEEKL True PC9_epitope_Rep5 1024.5076908895599 1024.5065899358601 39.415 2 0.17291937429292983 0.0005449591280653951 0.0017825118462587088 ['ENSG00000166224|ENST00000373202|SGPL1'] 104220 15923 SQHGVIIQL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 66.057 2 0.17291446661088494 0.0005449591280653951 0.0017827136057956476 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 39496 6557 HLDTLTEHY True H1975_Epitope_Rep2 1127.52473793603 1127.52364993586 30.133 2 0.17291127343160878 0.0005449591280653951 0.0017828448927462513 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 32648 8632 GGNFGFGDSR True PC9_epitope_Rep6 1012.4362572847999 1012.43516993586 43.021 2 0.17290682452758743 0.0005449591280653951 0.0017830278247119434 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 6828 11737 AQFEHTILL True NCI_RA007_Epitope_Rep3 1070.5760452329 1070.57494993586 53.279 2 0.17290558889153865 0.0005449591280653951 0.0017830786354645495 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 40500 13947 HRDSGILGL True PC9_epitope_Rep3 966.5246783663799 966.52358993586 58.724 2 0.17289910342951778 0.0005449591280653951 0.0017833453487688436 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 96101 7599 RYMPQNPHI True PC9_epitope_Rep2 1154.5654976325397 1154.5638449037901 34.599 3 0.17288532251401448 0.0005449591280653951 0.0017839122186911317 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 105713 5855 SSESGHYYSY True H1975_Epitope_Rep3 1178.4516325654201 1178.45052993586 27.535 2 0.17288371597237315 0.0005449591280653951 0.0017839783145815647 ['ENSG00000170185|ENST00000307017|USP38', 'nc|ENSG00000170185|Q8NB14-2|USP38'] 118025 18710 TYEGIFKTL True PC9_epitope_Rep4 1070.56481184286 1070.56370993586 80.047 2 0.17287677053605846 0.0005449591280653951 0.001784264090000909 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 121969 15413 VFTPVVQRI True PC9_epitope_Rep2 1057.6284151589298 1057.62730993586 64.566 2 0.17287465990426726 0.0005449591280653951 0.001784350942677094 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 111361 13217 THQTIVVQL True PC9_epitope_Rep4 1037.58694426977 1037.58584993586 58.736 2 0.17287251114239338 0.0005449591280653951 0.0017844393687562912 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 115082 16467 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61278993586 68.479 2 0.17286499840337918 0.0005449591280653951 0.001784748568274971 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 107432 18238 SVLQSIEKI True PC9_epitope_Rep2 1015.5913609438699 1015.59026993586 75.472 2 0.17285626649139094 0.0005449591280653951 0.0017851080123105604 ['ENSG00000121931|ENST00000369763|LRIF1'] 24589 22010 FAIDPHLLL True PC9_epitope_Rep1 1037.59096702105 1037.5898699358602 89.485 2 0.17285361153305648 0.0005449591280653951 0.0017852173164770763 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 131400 9867 VTHLLQQEL True NCI_RA007_Epitope_Rep4 1079.5975089534702 1079.59640993586 44.8 2 0.1728514535312957 0.0005449591280653951 0.0017853061659643943 ['nc|ENSG00000130303|Q10589-2|BST2', 'ENSG00000130303|ENST00000252593|BST2'] 21218 5246 ERDPGGITA True PC9_epitope_Rep5 914.4457593393399 914.44466993586 25.196 2 0.17284832689688104 0.0005449591280653951 0.0017854349039543446 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 26253 17785 FHEGDVITL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 73.427 2 0.17284770576705008 0.0005449591280653951 0.0017854604798465525 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 45343 21043 IQDEEFYTL True PC9_epitope_Rep1 1156.5288202569598 1156.5277299358602 85.772 2 0.17284482474220741 0.0005449591280653951 0.0017855791148815412 ['ENSG00000178502|ENST00000319121|KLHL11'] 89879 8061 RAYDGTTYL True H1975_Epitope_Rep1 1058.50327421546 1058.5021699358601 35.95 2 0.17284470393863346 0.0005449591280653951 0.0017855840895115908 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 6929 15196 AQIKEMVEL True PC9_epitope_Rep2 1059.56343194387 1059.5623299358601 63.711 2 0.1728430870401045 0.0005449591280653951 0.0017856506739102299 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 13221 12469 DLSLDDFK True H1975_Epitope_Rep3 951.45492704071 951.45382993586 53.156 2 0.17284188886784158 0.0005449591280653951 0.0017857000166304085 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 107135 19062 SVIDHIHLI True PC9_epitope_Rep5 1045.59202965021 1045.59092993586 78.351 2 0.1728402439527456 0.0005449591280653951 0.001785767759183903 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 18881 12080 ELDTPINY True H1975_Epitope_Rep2 963.4549270407099 963.4543749679301 51.548 1 0.17283717732293843 0.0005449591280653951 0.0017858940590951636 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 133645 18448 VYAILTHGI True PC9_epitope_Rep5 985.5596668927699 985.55856993586 75.981 2 0.17283134439551284 0.0005449591280653951 0.0017861343143381425 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 56120 14999 LAVDAVIAELK True H1975_Epitope_Rep3 1140.675424921 1140.6743299358602 63.083 2 0.17282753797182313 0.0005449591280653951 0.0017862911163910751 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 118292 21324 TYLPTSPLL True PC9_epitope_Rep2 1003.55899818643 1003.55790993586 87.487 2 0.17282676012469655 0.0005449591280653951 0.0017863231607691044 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 118207 20957 TYKNFFYLI True PC9_epitope_Rep4 1207.62774645259 1207.62664993586 88.772 2 0.17282615140885083 0.0005449591280653951 0.0017863482379753576 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 115141 7814 TRDEVDATL True PC9_epitope_Rep4 1018.4931034545799 1018.49200993586 37.46 2 0.172815191531656 0.0005449591280653951 0.0017867998112381085 ['DSCC1|p.C98Lfs*7|1|0.32|ENSG00000136982|chr8:119853105-119853105|C/-|frameshift_variant', 'ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 90917 11432 REYPNLVTI True NCI_RA007_Epitope_Rep5 1103.59750895347 1103.59640993586 50.622 2 0.17281403204764717 0.0005449591280653951 0.0017868475914466352 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 107370 21001 SVLKELLQV True PC9_epitope_Rep5 1027.6277464525897 1027.62664993586 85.843 2 0.1728121967935353 0.0005449591280653951 0.0017869232215151688 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2'] 131554 19128 VTLDNGIIRV True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 78.61 2 0.17280823294821543 0.0005449591280653951 0.0017870865808868055 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75651254-75651557:-|nuORF', 'ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 11007 4438 DAPQDFHPDR True H1975_Epitope_Rep3 1196.52104953792 1196.51941490379 22.194 3 0.17280647528781976 0.0005449591280653951 0.0017871590229816792 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 53211 22042 KQFDDVLIYL True PC9_epitope_Rep1 1252.6703395405598 1252.66924993586 89.598 2 0.17280347233963494 0.0005449591280653951 0.0017872827964994192 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26'] 91368 17610 RHDDYLVML True PC9_epitope_Rep2 1160.5648289262 1160.56318490379 73.014 3 0.17279393333026927 0.0005449591280653951 0.0017876760259497371 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 118571 12996 TYQSITERI True PC9_epitope_Rep5 1109.57168812845 1109.5705899358602 54.998 2 0.17279204286810326 0.0005449591280653951 0.0017877539673203876 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.Y362Ifs*20|1|0.29|ENSG00000131558|chr7:133374899-133374900|-/G|frameshift_variant'] 8914 8832 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6971299358602 40.637 2 0.17278651160745193 0.0005449591280653951 0.0017879820337551504 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 104272 17432 SQIHDIVLV True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 71.85 2 0.1727861718020831 0.0005449591280653951 0.0017879960456514004 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 28978 8905 FTDVRAAVY True H1975_Epitope_Rep3 1040.52909504048 1040.5279899358602 39.252 2 0.17278583357973643 0.0005449591280653951 0.00178800999238077 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant', 'nc|ENSG00000115414|P02751-16|FN1', 'nc|ENSG00000115414|P02751-2|FN1'] 74805 9684 NHDTGEYVL True PC9_epitope_Rep4 1046.46688870674 1046.4657899358601 44.879 2 0.17278519039389326 0.0005449591280653951 0.0017880365146983595 ['ENSG00000144597|ENST00000396842|EAF1'] 93595 9189 RQPDSGISSI True PC9_epitope_Rep1 1058.5356369729 1058.53452993586 40.195 2 0.1727788461433104 0.0005449591280653951 0.001788298146388283 ['ENSG00000163902|ENST00000296255|RPN1'] 44029 18729 IIIPEIQKV True PC9_epitope_Rep2 1051.66413196131 1051.66302993586 77.42 2 0.17277842988353495 0.0005449591280653951 0.0017883153139394083 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 140501 14808 YRLLPGPSA True PC9_epitope_Rep5 972.5392658013599 972.53816993586 61.958 2 0.17277183332307944 0.0005449591280653951 0.0017885873939286433 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 1352 6386 AEEAARLSVAA True H1975_Epitope_Rep1 1086.56693710118 1086.5658499358601 29.623 2 0.1727710891420727 0.0005449591280653951 0.0017886180908223378 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 40234 12919 HQIEAVDGEEL True PC9_epitope_Rep5 1238.5778957076998 1238.57678993586 54.704 2 0.17276538721096824 0.0005449591280653951 0.0017888533085902633 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 6624 18281 APWKPTWPA True PC9_epitope_Rep3 1052.5443511817998 1052.54324993586 75.524 2 0.1727649588487871 0.0005449591280653951 0.001788870980765403 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23', 'PRSS23|p.A166Qfs*19|1|0.13|ENSG00000150687|chr11:86808138-86808138|G/-|frameshift_variant'] 107755 6317 SVSQPIMVQR True NCI_RA007_Epitope_Rep3 1143.60702809135 1143.60592993586 31.851 2 0.17276457078974472 0.0005449591280653951 0.0017888869903766199 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'PUM1-NKAIN1|3|fusion'] 88045 14740 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 61.696 2 0.17275480427025441 0.0005449591280653951 0.0017892899612883737 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 131646 6908 VTLTSEEEAR True PC9_epitope_Rep1 1133.5564319871298 1133.55532993586 31.377 2 0.17274986351009447 0.0005449591280653951 0.0017894938538424768 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 7156 6312 AQYEDIANR True PC9_epitope_Rep4 1078.5043368446197 1078.5032299358602 31.339 2 0.17274887346000564 0.0005449591280653951 0.0017895347134779468 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 85059 10089 QEISHLIEP True NCI_RA007_Epitope_Rep1 1064.55022440788 1064.54912993586 43.253 2 0.1727385120517528 0.0005449591280653951 0.0017899623876316045 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 89562 18729 QYMERLQLL True PC9_epitope_Rep4 1192.62742918276 1192.6263299358602 80.122 2 0.17273621936151984 0.0005449591280653951 0.0017900570337973962 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 108508 18479 SYM[Oxidation]GHFDLL True PC9_epitope_Rep2 1097.48518200361 1097.48408993586 76.414 2 0.1727337690793483 0.0005449591280653951 0.0017901581911645716 ['ENSG00000169976|ENST00000367569|SF3B5'] 140655 17278 YRTDMIQAL True PC9_epitope_Rep1 1109.55392988933 1109.55282993586 71.278 2 0.17272596616072866 0.0005449591280653951 0.0017904803647182629 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 140899 13827 YSEEIVEMY True H1975_Epitope_Rep1 1161.4899922200898 1161.48947496793 58.332 1 0.1727235032779139 0.0005449591280653951 0.0017905820663716098 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 140082 21501 YQLEIPENFTT True PC9_epitope_Rep1 1353.6452469915296 1353.64414993586 87.547 2 0.17272186724913166 0.0005449591280653951 0.0017906496273219056 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 115249 11807 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.5811499358601 50.747 2 0.17272040463864236 0.0005449591280653951 0.0017907100290028286 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 46638 5922 ITDKNSLAY True H1975_Epitope_Rep2 1023.52367530687 1023.5225699358599 27.765 2 0.17272014831214758 0.0005449591280653951 0.0017907206147728713 ['ENSG00000163510|ENST00000410053|CWC22'] 142587 19037 YYLTDVDRI True PC9_epitope_Rep1 1156.5764391557198 1156.57534993586 78.016 2 0.17271709174697178 0.0005449591280653951 0.0017908468496096888 ['ENSG00000088256|ENST00000078429|GNA11'] 73071 12091 MRDPTFVRL True PC9_epitope_Rep6 1133.60154878809 1133.59990490379 57.835 3 0.1727116718500592 0.0005449591280653951 0.0017910707109373765 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 21478 20047 ERLGQFMTL True PC9_epitope_Rep5 1093.55901526977 1093.5579099358602 82.164 2 0.1727113779900462 0.0005449591280653951 0.0017910828492182082 ['ENSG00000113739|ENST00000265087|STC2'] 8612 5008 ATYSVGMQK True NCI_RA007_Epitope_Rep5 983.4746169394699 983.47350993586 25.967 2 0.1727075490698751 0.0005449591280653951 0.0017912410154122252 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'nc|ENSG00000258628|A8MT19|RHPN2P1', 'ENST00000592247.1_1_19:33470904-33481620:-|nuORF'] 24527 13744 FAFQAEVNR True PC9_epitope_Rep1 1080.53524305008 1080.5341499358601 57.711 2 0.1726867107263652 0.0005449591280653951 0.001792102057120047 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000559111.1_1_15:99797871-99798159:+|nuORF'] 103402 6197 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 30.446 2 0.17268577505833918 0.0005449591280653951 0.0017921407287001866 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 47901 12663 IYIKHPHLF True PC9_epitope_Rep2 1166.66004964038 1166.6589499358602 54.015 2 0.17268293318405675 0.0005449591280653951 0.0017922581897627146 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 45577 12729 IQTAVRLLL True NCI_RA007_Epitope_Rep3 1025.6597152872098 1025.65860993586 57.304 2 0.1726749238754345 0.0005449591280653951 0.0017925892739822126 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 33208 7318 GKAKTIIQL True NCI_RA007_Epitope_Rep4 970.6175161220599 970.61640993586 34.787 2 0.1726719448264948 0.0005449591280653951 0.0017927124358216996 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 125162 10237 VIHDNFGIVEG True H1975_Epitope_Rep1 1198.59823722946 1198.5971499358602 44.32 2 0.1726602906235095 0.0005449591280653951 0.0017931943330782478 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 63253 11895 LLSNDEVTIK True PC9_epitope_Rep1 1130.6183039677 1130.61720993586 50.621 2 0.17264557577488157 0.0005449591280653951 0.0017938029721714245 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 54589 13498 KYITQGQLLQF True NCI_RA007_Epitope_Rep5 1337.73433677945 1337.7332299358602 58.603 2 0.17264492322966254 0.0005449591280653951 0.0017938299676903522 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 140994 11897 YSHPGVVFL True H1975_Epitope_Rep3 1017.5283667644899 1017.52726993586 50.914 2 0.17263929915867202 0.0005449591280653951 0.0017940626499765968 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 28172 9509 FRDQNPEQL True PC9_epitope_Rep5 1145.5465360097699 1145.54542993586 41.535 2 0.17263425962183981 0.0005449591280653951 0.0017942711742423094 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 75073 9759 NHVASDISL True PC9_epitope_Rep4 954.47705946762 954.47596993586 45.18 2 0.1726324565466697 0.0005449591280653951 0.00179434578717429 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 26371 8484 FHTTPNTSL True PC9_epitope_Rep2 1016.49270953176 1016.49160993586 38.0 2 0.1726206796806062 0.0005449591280653951 0.001794833201261061 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 131644 5222 VTLTSEEEAR True NCI_RA007_Epitope_Rep4 1133.5564319871298 1133.55532993586 26.622 2 0.17261951594624103 0.0005449591280653951 0.0017948813724161037 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 114705 13808 TQIDHYVGI True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 61.009 2 0.17261264506173407 0.0005449591280653951 0.001795165809436748 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 89057 10203 QVLSEVSRV True PC9_epitope_Rep4 1015.56620882519 1015.56510993586 46.922 2 0.17261142638739607 0.0005449591280653951 0.0017952162641433262 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 102628 22968 SLWQEIPVV True PC9_epitope_Rep5 1069.58079626017 1069.5796899358602 93.336 2 0.17260533314993723 0.0005449591280653951 0.0017954685534081602 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 104248 11637 SQIDPSSIERA True PC9_epitope_Rep1 1201.5938801250102 1201.59278993586 49.641 2 0.1726044634651436 0.0005449591280653951 0.00179550456542494 ['ENSG00000100393|ENST00000263253|EP300'] 115471 14839 TRNDYVMMY True PC9_epitope_Rep2 1191.50526544475 1191.50416993586 62.343 2 0.17260013326362772 0.0005449591280653951 0.0017956838817121661 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 14427 11523 DTDSRFIPY True H1975_Epitope_Rep2 1112.51383889916 1112.51274993586 49.381 2 0.17259541995842198 0.0005449591280653951 0.0017958790829293832 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP', 'SEC23IP|p.W379Cfs*5|1|0.7|ENSG00000107651|chr10:119909075-119909075|G/-|frameshift_variant', 'SEC23IP|p.G412Afs*13|1|0.2|ENSG00000107651|chr10:119912084-119912084|G/-|frameshift_variant'] 78148 12137 NYAFLHRTL True PC9_epitope_Rep4 1133.59817765981 1133.5970899358601 54.499 2 0.17258708708426165 0.0005449591280653951 0.0017962242403163446 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 117866 8089 TVYSGEEKL True PC9_epitope_Rep2 1024.5076908895599 1024.5065899358601 36.471 2 0.17257973791971837 0.0005449591280653951 0.0017965287064005222 ['ENSG00000166224|ENST00000373202|SGPL1'] 95753 9807 RYIANTVEL True NCI_RA007_Epitope_Rep1 1077.58185888933 1077.5807699358602 42.15 2 0.1725734800873724 0.0005449591280653951 0.0017967880007634161 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 68106 5888 LTDPDGALAK True H1975_Epitope_Rep2 999.5236753068699 999.52256993586 27.634 2 0.17257053726960211 0.0005449591280653951 0.0017969099498738128 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 7153 6659 AQYEDIANR True PC9_epitope_Rep2 1078.5043368446197 1078.5032299358602 31.02 2 0.17256743455419246 0.0005449591280653951 0.0017970385340452368 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 25534 10714 FEIGGTIHP True H1975_Epitope_Rep3 969.49198125577 969.49088993586 46.288 2 0.1725597308146067 0.0005449591280653951 0.0017973578358154044 ['ENSG00000138678|ENST00000264409|GPAT3'] 1664 7392 AEFVEVTK True PC9_epitope_Rep6 921.4807478657299 921.47964993586 37.647 2 0.17254747609506338 0.0005449591280653951 0.0017978658819431496 ['CON__P02769'] 97246 9832 SEADIRGFVA True NCI_RA007_Epitope_Rep5 1063.52982331647 1063.5287299358602 44.463 2 0.17254581375642974 0.0005449591280653951 0.0017979348088866616 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 16809 6242 EEVSSM[Oxidation]VLTK True NCI_RA007_Epitope_Rep2 1137.55874086669 1137.5576499358601 28.885 2 0.17254240000567667 0.0005449591280653951 0.0017980763643949955 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 87656 9017 QQSELQSQV True PC9_epitope_Rep1 1045.5040024914501 1045.50290993586 39.532 2 0.17254162830244849 0.0005449591280653951 0.001798108365594685 ['ENSG00000002834|ENST00000318008|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1', 'nc|ENSG00000078114|O76041-2|NEBL'] 21169 10793 ERDAYVQAL True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 49.275 2 0.17253077077949192 0.0005449591280653951 0.0017985586687477722 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 118329 11095 TYM[Oxidation]GHTGAVW True PC9_epitope_Rep5 1137.49133001321 1137.49022993586 47.666 2 0.1725283551406685 0.0005449591280653951 0.0017986588699099686 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 76481 9429 NQIDHEVTV True PC9_epitope_Rep1 1053.50908787189 1053.50798993586 41.126 2 0.17252735909711825 0.0005449591280653951 0.0017987001876144805 ['ENSG00000112159|ENST00000369393|MDN1'] 74797 11177 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.4657899358601 47.876 2 0.17252232395405795 0.0005449591280653951 0.001798909069078026 ['ENSG00000144597|ENST00000396842|EAF1'] 35840 5101 GTLNQPLTK True NCI_RA007_Epitope_Rep4 970.54474510462 970.54364993586 26.127 2 0.1725212933114246 0.0005449591280653951 0.0017989518279848276 ['ENSG00000103671|ENST00000261884|TRIP4'] 23101 15755 EVIRELAGI True PC9_epitope_Rep6 998.5760452328998 998.57494993586 72.834 2 0.17251832114192175 0.0005449591280653951 0.0017990751419112384 ['ENSG00000066654|ENST00000396083|THUMPD1'] 88991 17998 QVIPQFQTV True PC9_epitope_Rep6 1058.5760452328998 1058.57494993586 81.857 2 0.17251154364832286 0.0005449591280653951 0.0017993563686016457 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 23657 21719 EYAHLFEVF True PC9_epitope_Rep1 1153.5444107514497 1153.5433099358602 88.376 2 0.17251052998842928 0.0005449591280653951 0.0017993984333924539 ['nc|ENSG00000130803|Q96PQ6-3|ZNF317', 'nc|ENSG00000130803|Q96PQ6-4|ZNF317', 'ENST00000591278.5_1_19:9268612-9272106:+|nuORF', 'ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317'] 3922 8050 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 40.453 2 0.17249378735856666 0.0005449591280653951 0.001800093360328955 ['ENSG00000075618|ENST00000382361|FSCN1'] 97509 4743 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 23.335 1 0.17249158670903836 0.0005449591280653951 0.0018001847214240642 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 8098 10493 ATDWGDTQAY True H1975_Epitope_Rep3 1126.4567179458597 1126.4561749679299 45.424 1 0.17249073266153128 0.0005449591280653951 0.001800220178894832 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 77012 11422 NRHYYSITI True PC9_epitope_Rep4 1165.58800689893 1165.5869099358601 51.703 2 0.17248650384185443 0.0005449591280653951 0.001800395757003677 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 42273 16569 IDTIEIITDR True PC9_epitope_Rep6 1187.63976768827 1187.6386699358602 76.173 2 0.17248638984259038 0.0005449591280653951 0.0018004004904233848 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 49343 9363 KESDIYIVA True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 40.976 2 0.17248550347531175 0.0005449591280653951 0.0018004372941415347 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 114921 11009 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 47.234 2 0.17248201152206968 0.0005449591280653951 0.0018005822942561737 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 7511 14580 ASDMLQLEY True H1975_Epitope_Rep2 1068.4797618895598 1068.4786699358601 61.238 2 0.1724804916353729 0.0005449591280653951 0.0018006454097899511 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 97426 16443 SEEEAFGILP True H1975_Epitope_Rep2 1090.51825557326 1090.51714993586 68.467 2 0.1724776011038667 0.0005449591280653951 0.0018007654494782011 ['ENST00000520503.1_1_8:33318275-33319160:-|nuORF', 'ENST00000327671.9_1_8:33311020-33319160:-|nuORF'] 106246 11300 STEQFQEYY True H1975_Epitope_Rep3 1193.48768372097 1193.4865899358601 48.571 2 0.17247572990788518 0.0005449591280653951 0.0018008431618732536 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 70978 15363 LYGRNFNYL True PC9_epitope_Rep6 1158.5821932425 1158.58108993586 71.24 2 0.17245986342205935 0.0005449591280653951 0.0018015022457259868 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 48933 4832 KEEEIARIA True H1975_Epitope_Rep2 1057.5767735088898 1057.57566993586 23.676 2 0.17245354909810126 0.0005449591280653951 0.0018017646059265591 ['ENSG00000171703|ENST00000343484|TCEA2', 'TCEA2|p.M28Ifs*34|1|0.12|ENSG00000171703|chr20:64066486-64066490|TGGAT/-|frameshift_variant'] 96713 21311 SALPDIKVLTL True PC9_epitope_Rep1 1168.7067250492798 1168.70562993586 86.801 2 0.17244656908920056 0.0005449591280653951 0.0018020546698411539 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 134175 18214 VYLPNINKI True PC9_epitope_Rep2 1072.62808080576 1072.6269899358601 75.377 2 0.1724377363602386 0.0005449591280653951 0.0018024217930890166 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 107524 17282 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 71.292 2 0.17243737107689303 0.0005449591280653951 0.0018024369773253714 ['ENSG00000073756|ENST00000367468|PTGS2'] 90146 6362 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 29.46 2 0.1724243526538795 0.0005449591280653951 0.0018029782156545905 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 118030 21414 TYEKFFGLL True PC9_epitope_Rep2 1116.5855472874398 1116.5844499358602 87.84 2 0.17242361107820628 0.0005449591280653951 0.0018030090514109197 ['ENSG00000163510|ENST00000410053|CWC22'] 140676 16995 YRVFTTQEL True PC9_epitope_Rep3 1155.5924235730297 1155.5913299358601 70.531 2 0.17242084834926943 0.0005449591280653951 0.0018031239342000563 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 141533 17171 YTLSKTEFL True PC9_epitope_Rep2 1100.5753765265601 1100.57426993586 71.308 2 0.17241866148518983 0.0005449591280653951 0.001803214875947156 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 29696 22236 FVLPILQKL True PC9_epitope_Rep1 1069.68995278633 1069.6888499358602 90.353 2 0.17240942983520943 0.0005449591280653951 0.0018035988289454143 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 54852 21891 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 89.017 2 0.17238840191347402 0.0005449591280653951 0.0018044737054478705 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 109383 9990 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep1 950.47091177432 950.4703649679301 43.361 1 0.1723857029188846 0.0005449591280653951 0.0018045860291298502 ['ENSG00000005022|ENST00000317881|SLC25A5'] 111352 9878 THQDVHLGETL True PC9_epitope_Rep5 1248.6098645423199 1248.60820490379 42.966 3 0.17238527885681507 0.0005449591280653951 0.001804603677898034 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 29528 15792 FVHDLVLYL True NCI_RA007_Epitope_Rep3 1117.6171817688898 1117.6160899358601 69.755 2 0.17238303515976064 0.0005449591280653951 0.0018046970597664104 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 77145 6400 NRPGTVSSL True PC9_epitope_Rep5 929.49304388493 929.49194993586 29.594 2 0.17237861686489916 0.0005449591280653951 0.0018048809617558792 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 111082 5733 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 27.442 2 0.17237607477181108 0.0005449591280653951 0.0018049867793948687 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 89675 22194 QYVYWLHML True PC9_epitope_Rep1 1251.61105084263 1251.6099499358602 90.189 2 0.1723760353251234 0.0005449591280653951 0.0018049884214589335 ['ENSG00000135926|ENST00000258412|TMBIM1'] 104990 14363 SRDKTIIMW True PC9_epitope_Rep2 1148.60121443492 1148.59957490379 60.509 3 0.1723705908077405 0.0005449591280653951 0.0018052150770472217 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 68337 15404 LTELPPLDDY True H1975_Epitope_Rep1 1174.57577044938 1174.5746699358601 64.522 2 0.1723675211802949 0.0005449591280653951 0.0018053428783806034 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 115571 8407 TRSTFSTNY True PC9_epitope_Rep1 1075.49343780775 1075.4923499358601 37.174 2 0.1723646733130826 0.0005449591280653951 0.0018054614550124357 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 138419 17587 YHIDVGTQTF True PC9_epitope_Rep3 1179.5560380643099 1179.5549499358601 72.837 2 0.17236310079213227 0.0005449591280653951 0.001805526933399046 ['ENSG00000118496|ENST00000237281|FBXO30'] 98326 15290 SEWDGIVTV True NCI_RA007_Epitope_Rep4 1004.4814761417199 1004.48097496793 66.466 1 0.17234579164497615 0.0005449591280653951 0.0018062478281088644 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 68182 7703 LTDRGVMSY True H1975_Epitope_Rep3 1040.49608066004 1040.49498993586 34.612 2 0.17233744302086837 0.0005449591280653951 0.0018065956361925874 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 84196 16997 PYLDKFFTL True NCI_RA007_Epitope_Rep4 1142.6011973515801 1142.60010993586 73.657 2 0.1723265222368801 0.0005449591280653951 0.0018070507030011444 ['ENSG00000130158|ENST00000294618|DOCK6'] 95179 19113 RVIDDSLVVGV True PC9_epitope_Rep5 1170.66083748602 1170.6597499358602 78.55 2 0.1723167614074599 0.0005449591280653951 0.0018074575318324639 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 46971 9159 ITPQTIHGV True PC9_epitope_Rep2 964.5341804209198 964.53308993586 40.569 2 0.1723163701864974 0.0005449591280653951 0.001807473839730923 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 15055 14550 DYQALRTSI True PC9_epitope_Rep2 1065.54547338061 1065.54436993586 61.239 2 0.1723130203409294 0.0005449591280653951 0.0018076134828104772 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 133743 20394 VYDVVELKF True PC9_epitope_Rep2 1110.5961119711399 1110.5950099358602 83.87 2 0.17229795051897356 0.0005449591280653951 0.0018082418233416452 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 86044 11055 QHQSGIVQL True PC9_epitope_Rep3 1008.5352430500798 1008.53414993586 47.52 2 0.17229349937776192 0.0005449591280653951 0.0018084274567604698 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 38211 6734 HEAEYYVAA True H1975_Epitope_Rep2 1051.46107505031 1051.45996993586 30.817 2 0.17228506962107973 0.0005449591280653951 0.0018087790693281235 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD', 'ENST00000482824.1_1_3:15676934-15683645:+|nuORF'] 99104 10991 SHHENLVSF True PC9_epitope_Rep5 1068.49885754136 1068.49776993586 47.266 2 0.1722767453106872 0.0005449591280653951 0.0018091263507790413 ['ENSG00000128791|ENST00000262120|TWSG1'] 104725 19299 SQVEEELFSV True PC9_epitope_Rep6 1165.55028397753 1165.54918993586 86.88 2 0.17227291916264464 0.0005449591280653951 0.0018092859960245485 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 133852 13771 VYGPLPQSF True NCI_RA007_Epitope_Rep3 1006.5123823471798 1006.51128993586 61.496 2 0.1722706381598512 0.0005449591280653951 0.001809381177108251 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 8301 23344 ATIIQLFQV True PC9_epitope_Rep3 1031.6015317047497 1031.6004299358601 95.072 2 0.17226986818775228 0.0005449591280653951 0.001809413307432447 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 111390 10047 THSFGNPSI True PC9_epitope_Rep1 958.45084471978 958.44974993586 43.514 2 0.17226638249005718 0.0005449591280653951 0.0018095587699729395 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.Q39Afs*14|1|0.2|ENSG00000145012|chr3:188406232-188406236|ACACA/-|frameshift_variant'] 44964 12162 IPAGTVTVNAA True PC9_epitope_Rep2 1012.55530978832 1012.55420993586 52.093 2 0.1722624609990307 0.0005449591280653951 0.0018097224327059773 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 32564 6594 GGGQIIPTAR True NCI_RA007_Epitope_Rep2 968.5403284305199 968.53922993586 30.258 2 0.17226231683072568 0.0005449591280653951 0.0018097284498269515 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 136856 13511 YADPTKRLEL True PC9_epitope_Rep1 1204.6451874218799 1204.6435349037902 56.825 3 0.17225821955547546 0.0005449591280653951 0.001809899465277588 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5'] 95239 8598 RVLQALEGLK True NCI_RA007_Epitope_Rep5 1125.6869926642098 1125.6858899358601 39.749 2 0.17225724243996002 0.0005449591280653951 0.001809940251318526 ['ENSG00000105372|ENST00000598742|RPS19'] 53801 11932 KTDKTLVLL True PC9_epitope_Rep2 1029.6433965167298 1029.6422899358602 51.218 2 0.17225520765852817 0.0005449591280653951 0.0018100251886285802 ['ENSG00000108518|ENST00000225655|PFN1'] 35755 3685 GTIEKSKLITK True NCI_RA007_Epitope_Rep4 1216.7390878067197 1216.73743490379 20.284 3 0.17225012567662942 0.0005449591280653951 0.0018102373417959764 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 129083 10239 VQPSKYHFL True PC9_epitope_Rep2 1117.5920296502102 1117.59092993586 44.719 2 0.17224869027097522 0.0005449591280653951 0.0018102972689597076 ['ENSG00000177383|ENST00000317897|MAGEF1'] 5814 19753 APELLFFAK True PC9_epitope_Rep4 1034.5800679841798 1034.5789699358602 84.104 2 0.172241905278955 0.0005449591280653951 0.001810580564418621 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 12737 6699 DLEGLSQR True H1975_Epitope_Rep3 916.46140940348 916.46030993586 30.722 2 0.17224182288113352 0.0005449591280653951 0.0018105840050680162 ['ENSG00000100345|ENST00000216181|MYH9'] 8142 10581 ATELQSMM[Oxidation]Y True H1975_Epitope_Rep2 1088.45183327 1088.4507299358602 45.722 2 0.17224175736686295 0.0005449591280653951 0.0018105867407231125 ['ENSG00000196284|ENST00000371459|SUPT3H'] 98351 6131 SEYIHAQVA True NCI_RA007_Epitope_Rep5 1016.4927095317598 1016.49160993586 30.263 2 0.17223965927486629 0.0005449591280653951 0.0018106743521599654 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 19331 8571 ELLDELSR True H1975_Epitope_Rep1 973.50802524273 973.50692993586 37.895 2 0.17223912900254415 0.0005449591280653951 0.001810696495769181 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2'] 28005 20223 FQLRSFDQL True PC9_epitope_Rep1 1152.5927579261997 1152.5916699358602 82.617 2 0.1722377828771572 0.0005449591280653951 0.001810752709753519 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 73253 4215 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep3 1081.43862573401 1081.43752993586 21.331 2 0.17223278316679555 0.0005449591280653951 0.0018109615121624627 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 38366 4622 HEISEGNVATA True H1975_Epitope_Rep1 1126.52546621202 1126.52436993586 22.804 2 0.17222117766326137 0.0005449591280653951 0.0018114462845479362 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 121555 20948 VFDPKVFTF True PC9_epitope_Rep2 1098.57498260374 1098.57388993586 86.025 2 0.17221482894349693 0.0005449591280653951 0.0018117115312708582 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 27464 13349 FM[Oxidation]DPASALY True H1975_Epitope_Rep2 1029.44773386573 1029.44662993586 56.479 2 0.17221270090829177 0.0005449591280653951 0.0018118004483447985 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 94709 5798 RSDPNSESLY True H1975_Epitope_Rep2 1166.52038083158 1166.5192899358601 27.291 2 0.17220237604546826 0.0005449591280653951 0.0018122319207828635 ['ENSG00000138593|ENST00000559471|SECISBP2L'] 36663 12430 GVIGQDGLLFK True NCI_RA007_Epitope_Rep3 1145.6444591458899 1145.6433699358602 56.107 2 0.17220154373984786 0.0005449591280653951 0.0018122667070248574 ['ENSG00000107371|ENST00000327304|EXOSC3', 'ENST00000465860.5_1_9:37781981-37784738:-|nuORF'] 127287 16566 VMAPRTVLL True PC9_epitope_Rep1 998.5946725024999 998.59356993586 68.544 2 0.17219479922737363 0.0005449591280653951 0.0018125486188048537 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 17532 20645 EHGIVVFSL True PC9_epitope_Rep3 999.5389314481899 999.53782993586 84.682 2 0.17219136812731647 0.0005449591280653951 0.0018126920511316593 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 7154 7336 AQYEDIANR True PC9_epitope_Rep3 1078.5043368446197 1078.5032299358602 33.228 2 0.17218860654945553 0.0005449591280653951 0.001812807503272451 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 28945 9548 FTDPRTMGY True H1975_Epitope_Rep3 1086.4804305958999 1086.47932993586 41.735 2 0.1721867906788423 0.0005449591280653951 0.0018128834226327623 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 13392 11390 DLYLENPEIK True H1975_Epitope_Rep1 1232.6288686514001 1232.6277699358602 48.79 2 0.1721855844924861 0.0005449591280653951 0.0018129338535883815 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 111012 9147 THDDSHLVSL True PC9_epitope_Rep2 1122.5305515924601 1122.5289149037899 40.524 3 0.17217840635389908 0.0005449591280653951 0.0018132340024130712 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 104260 17871 SQIEADFRL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 74.043 2 0.17217748194853633 0.0005449591280653951 0.0018132726593886837 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 53220 6003 KQFEKQVEL True NCI_RA007_Epitope_Rep4 1147.6237237013097 1147.62208490379 29.709 3 0.17216539124727218 0.0005449591280653951 0.0018137783467971791 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 101506 22725 SLLDRFLATV True PC9_epitope_Rep2 1133.6444591458899 1133.6433699358602 92.909 2 0.17216449741779494 0.0005449591280653951 0.00181381573636094 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 25586 11004 FELFADKVPK True NCI_RA007_Epitope_Rep2 1192.6492101731599 1192.64755490379 47.413 3 0.17215163784024562 0.0005449591280653951 0.0018143537476138752 ['ENSG00000196262|ENST00000468812|PPIA'] 46604 11778 ITDDLHFY True H1975_Epitope_Rep3 1022.47091145802 1022.4698099358601 50.448 2 0.1721417210924107 0.0005449591280653951 0.001814768747597717 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 85880 18507 QHFDTIYSI True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 76.211 2 0.17213453090192415 0.0005449591280653951 0.001815069704940448 ['ENSG00000010292|ENST00000315579|NCAPD2'] 4081 19897 AHMDIFQNL True PC9_epitope_Rep2 1087.5120650773501 1087.5109699358602 81.929 2 0.17213058312140714 0.0005449591280653951 0.0018152349670792166 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1'] 40351 5824 HQRITEEL True NCI_RA007_Epitope_Rep2 1024.53015766964 1024.5290699358602 27.272 2 0.17213010723933966 0.0005449591280653951 0.0018152548894895114 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 72479 5627 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 26.712 2 0.17212767506414176 0.0005449591280653951 0.0018153567139155382 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 108117 19368 SYDPDFNQL True PC9_epitope_Rep2 1097.46655435357 1097.46597496793 79.875 1 0.17212113832143025 0.0005449591280653951 0.0018156304067694186 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 135060 4728 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 23.279 2 0.1721161301671671 0.0005449591280653951 0.0018158401256959473 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 68425 11698 LTEVDNYHFY True H1975_Epitope_Rep3 1299.5771674317102 1299.57657496793 50.136 1 0.17210910886343359 0.0005449591280653951 0.0018161341870680271 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 2221 4497 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep3 1120.4971436696399 1120.4960499358601 22.417 2 0.1721063116829663 0.0005449591280653951 0.0018162513499144963 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 72052 19683 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55652993586 81.936 2 0.17210048491393518 0.0005449591280653951 0.0018164954345559385 ['ENSG00000198712|ENST00000361739|MT-CO2'] 40732 2605 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 14.686 3 0.1720986914243712 0.0005449591280653951 0.0018165705708369563 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 8916 13842 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6965849037902 58.087 3 0.17209687376825328 0.0005449591280653951 0.0018166467227227372 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 38607 8150 HFC[Carbamidomethyl]GGSLINSQ True NCI_RA007_Epitope_Rep1 1218.54515639021 1218.5440499358601 35.701 2 0.17209547007953135 0.0005449591280653951 0.00181670553336135 ['CON__P00761'] 27847 16031 FQDKDQVFI True PC9_epitope_Rep1 1138.56587447202 1138.56476993586 66.475 2 0.17209119553895824 0.0005449591280653951 0.0018168846364136273 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 142714 20443 YYQEYPMSI True PC9_epitope_Rep5 1192.5110620178398 1192.50996993586 83.671 2 0.17208847813940426 0.0005449591280653951 0.001816998504516706 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 70822 20373 LYCGKTLLF True PC9_epitope_Rep5 1056.56778904832 1056.56668993586 83.399 2 0.1720817151704318 0.0005449591280653951 0.0018172819264757796 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP'] 26717 9489 FIVNTNVPR True NCI_RA007_Epitope_Rep1 1058.58727862294 1058.5861899358601 40.905 2 0.1720782037987045 0.0005449591280653951 0.001817429098208106 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 83296 10848 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 46.756 2 0.17207816005341733 0.0005449591280653951 0.0018174309317746818 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 31951 16393 GENPLQVLV True H1975_Epitope_Rep3 967.5338460677499 967.53274993586 68.529 2 0.1720765379805469 0.0005449591280653951 0.0018174989216306354 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 23910 19086 EYLADLYHF True PC9_epitope_Rep6 1169.5393253710101 1169.53822993586 86.058 2 0.17207407249714593 0.0005449591280653951 0.0018176022682630652 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 26704 8273 FIVGADNVGSK True NCI_RA007_Epitope_Rep2 1105.57677350889 1105.57566993586 36.818 2 0.17207127850955034 0.0005449591280653951 0.0018177193920430258 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 32198 10349 GEWPDQPRI True NCI_RA007_Epitope_Rep5 1096.53015766964 1096.5290699358602 46.437 2 0.1720670569346225 0.0005449591280653951 0.0018178963745201092 ['PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'PTPN12-RSBN1L|8|fusion', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L', 'ENSG00000187257|ENST00000334955|RSBN1L'] 103240 7414 SPLFSQHTA True PC9_epitope_Rep6 986.48214484806 986.48104993586 37.738 2 0.17206448447409572 0.0005449591280653951 0.0018180042290865575 ['ENSG00000167721|ENST00000301364|TSR1'] 73320 9162 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46397496793 40.193 1 0.17205671519108026 0.0005449591280653951 0.001818330007715852 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 11708 19628 DHAEFSYVL True PC9_epitope_Rep2 1079.49237517859 1079.4912699358601 80.884 2 0.17205529240377 0.0005449591280653951 0.001818389673822686 ['ENSG00000188352|ENST00000338382|FOCAD'] 10069 8879 AYSSYVHQY True PC9_epitope_Rep6 1116.48762415132 1116.48652993586 44.096 2 0.17205129249148615 0.0005449591280653951 0.0018185574249176865 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 40037 9984 HPTEDLVVSA True PC9_epitope_Rep2 1066.5294889632999 1066.52838993586 43.733 2 0.17204965928153912 0.0005449591280653951 0.0018186259240617294 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 2005 5523 AEIRAINEA True NCI_RA007_Epitope_Rep5 985.51925863277 985.51816993586 27.93 2 0.17204812274362188 0.0005449591280653951 0.0018186903710009758 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 135057 4451 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 22.232 2 0.17204648187746424 0.0005449591280653951 0.0018187591962984392 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 118690 12860 TYTDVTPRQF True PC9_epitope_Rep2 1226.59315184902 1226.5920499358601 54.767 2 0.17204568181639504 0.0005449591280653951 0.001818792755398878 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 45140 17909 IPNPAQTSVVV True PC9_epitope_Rep1 1123.62372370131 1123.62262993586 73.678 2 0.17203854870627783 0.0005449591280653951 0.0018190919859010165 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 104408 18245 SQLDVPFKV True PC9_epitope_Rep4 1031.56514619603 1031.56404993586 78.248 2 0.17203483428863212 0.0005449591280653951 0.001819247823422476 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 33401 15163 GLADNTVIAKV True PC9_epitope_Rep2 1099.62372370131 1099.62262993586 63.582 2 0.17203339600267836 0.0005449591280653951 0.0018193081699607134 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 104123 3802 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 20.786 2 0.17203237449971073 0.0005449591280653951 0.0018193510306433287 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 77645 19462 NTFTKLITV True PC9_epitope_Rep5 1035.59644632431 1035.5953499358602 79.913 2 0.17202693275753891 0.0005449591280653951 0.0018195793747487006 ['ENSG00000106615|ENST00000262187|RHEB'] 105015 17431 SRDLFTYTV True PC9_epitope_Rep4 1100.55022440788 1100.54912993586 75.042 2 0.17200798723041155 0.0005449591280653951 0.0018203745827929656 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 108438 15280 SYLPLAHMF True NCI_RA007_Epitope_Rep3 1077.53173789277 1077.53064993586 67.651 2 0.17200499503455294 0.0005449591280653951 0.0018205002072024324 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 60903 13578 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 57.25 2 0.1720033724905042 0.0005449591280653951 0.001820568331751355 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 92354 14992 RLPDIPLRQV True PC9_epitope_Rep2 1205.72444080209 1205.72278490379 62.923 3 0.17200099833448565 0.0005449591280653951 0.0018206680182701255 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 54735 18471 KYMDVQFDF True PC9_epitope_Rep6 1191.52704643515 1191.5259499358601 83.689 2 0.17199585248930507 0.0005449591280653951 0.0018208841017569625 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 65381 9490 LREDSTVSL True PC9_epitope_Rep4 1018.5294889633 1018.52838993586 44.116 2 0.17198956440398958 0.0005449591280653951 0.001821148184847375 ['ENSG00000120875|ENST00000240100|DUSP4'] 99623 5547 SIFKQPVTK True NCI_RA007_Epitope_Rep4 1046.61243074162 1046.61132993586 27.934 2 0.17198832045471205 0.0005449591280653951 0.0018212004319954087 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 10145 6904 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep2 1119.5171508382302 1119.51604993586 31.473 2 0.17197397789018393 0.0005449591280653951 0.0018218029428113884 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 45688 17182 IRKPYIWEY True PC9_epitope_Rep5 1266.67609362734 1266.6749899358601 71.112 2 0.17197356226786503 0.0005449591280653951 0.0018218204054899162 ['ENSG00000136628|ENST00000366923|EPRS1'] 68414 10897 LTETVVTEY True H1975_Epitope_Rep1 1053.52300660053 1053.5224749679298 46.877 1 0.17196444484680812 0.0005449591280653951 0.0018222035228115951 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 82659 23021 PQPDVFPLF True PC9_epitope_Rep2 1058.54368247546 1058.5431749679299 94.043 1 0.17195786513667805 0.0005449591280653951 0.0018224800546924487 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 104819 12710 SRAEDYEVL True PC9_epitope_Rep3 1080.50875351872 1080.5076499358602 53.911 2 0.17195620469980427 0.0005449591280653951 0.0018225498461250395 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 134810 21145 VYTVVDEMFL True PC9_epitope_Rep6 1214.5893123385397 1214.58820993586 94.18 2 0.17195439516540756 0.0005449591280653951 0.0018226259074659208 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 21488 5904 ERLKEAYSV True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 29.616 2 0.1719526923084275 0.0005449591280653951 0.0018226974876665988 ['ENSG00000174231|ENST00000304992|PRPF8'] 90704 2751 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 14.609 2 0.17194705234874905 0.0005449591280653951 0.0018229345854739048 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 141372 7179 YTEEDAASY True H1975_Epitope_Rep2 1047.40328539067 1047.4021899358602 32.548 2 0.17194681024478792 0.0005449591280653951 0.001822944763953557 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 136834 14660 YADGESFLGY True H1975_Epitope_Rep1 1120.4713053808398 1120.4707749679299 61.604 1 0.1719466558567294 0.0005449591280653951 0.0018229512547308872 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 134094 18472 VYKTIMEQF True PC9_epitope_Rep1 1157.57908200801 1157.5779899358602 75.844 2 0.17194390530439715 0.0005449591280653951 0.0018230668972320202 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 139252 9755 YLHSQVVSV True PC9_epitope_Rep6 1030.5447451046198 1030.54364993586 47.952 2 0.1719433685450681 0.0005449591280653951 0.00182308946526149 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 140379 20440 YRDWFSSQL True PC9_epitope_Rep1 1200.55637241748 1200.55526993586 83.436 2 0.17194203842612069 0.0005449591280653951 0.0018231453912765465 ['ENST00000522359.2_1_11:61630757-61632750:+|nuORF', 'nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2'] 49258 8809 KEQEWTPIT True H1975_Epitope_Rep2 1130.5607890915799 1130.5596899358602 38.85 2 0.17194096456114205 0.0005449591280653951 0.0018231905441218645 ['ENST00000471757.5_1_2:96691131-96693504:-|nuORF', 'nc|ENSG00000186281|Q6NUI2-3|GPAT2', 'ENST00000486463.5_1_2:96687909-96693504:-|nuORF', 'ENST00000484440.5_1_2:96688852-96698107:-|nuORF', 'nc|ENSG00000186281|Q6NUI2|GPAT2', 'ENSG00000186281|ENST00000434632|GPAT2', 'nc|ENSG00000186281|Q6NUI2-5|GPAT2'] 88961 19735 QVIEELFKA True PC9_epitope_Rep1 1075.5913609438699 1075.59026993586 80.738 2 0.17194042012458935 0.0005449591280653951 0.0018232134364957026 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 41550 19869 HYSENMFSF True PC9_epitope_Rep3 1160.4596951513201 1160.4585899358601 81.663 2 0.17193072199320542 0.0005449591280653951 0.001823621270047428 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 44479 22876 ILLDRLLYL True PC9_epitope_Rep1 1130.7063311264599 1130.7052299358602 92.787 2 0.17192897777337515 0.0005449591280653951 0.0018236946290559942 ['ENSG00000143303|ENST00000368216|METTL25B'] 106900 11132 SVDPHGFISY True H1975_Epitope_Rep1 1120.5189242796 1120.5178299358602 47.786 2 0.17192546419712323 0.0005449591280653951 0.0018238424132432315 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant'] 140919 14195 YSEIKDFLSY True H1975_Epitope_Rep1 1263.60231955039 1263.6012299358601 59.779 2 0.17191993152060547 0.0005449591280653951 0.0018240751469040793 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C', 'ENST00000492201.5_1_10:14962436-14970058:-|nuORF'] 98934 14290 SHAENILQI True PC9_epitope_Rep4 1023.53490869691 1023.53380993586 62.866 2 0.1719183336834436 0.0005449591280653951 0.0018241423659239582 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 40221 20341 HQIDLIVQL True PC9_epitope_Rep2 1077.61824439805 1077.6171499358602 83.664 2 0.1719170531125481 0.0005449591280653951 0.0018241962397365346 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 27284 18163 FLQPELVKL True PC9_epitope_Rep6 1085.6484818971699 1085.64738993586 82.506 2 0.1719137477837214 0.0005449591280653951 0.0018243353027828039 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 126342 20836 VLIPKLPQL True PC9_epitope_Rep1 1019.6743027221899 1019.67320993586 84.973 2 0.1719137453102855 0.0005449591280653951 0.0018243354068501084 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 23908 20229 EYLADLYHF True PC9_epitope_Rep4 1169.5393253710101 1169.53822993586 85.951 2 0.17190097646103863 0.0005449591280653951 0.0018248727224044687 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 9821 17740 AYLEAIHNF True PC9_epitope_Rep2 1076.52909504048 1076.5279899358602 73.519 2 0.17189977964726375 0.0005449591280653951 0.001824923092667997 ['ENSG00000042753|ENST00000263270|AP2S1'] 118681 21032 TYTDRVFFL True PC9_epitope_Rep3 1160.5866099165999 1160.58550993586 86.178 2 0.17187567161031578 0.0005449591280653951 0.001825938023203037 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 95898 17411 RYLDLFTSF True NCI_RA007_Epitope_Rep5 1160.5866099165999 1160.58550993586 73.754 2 0.1718751614217575 0.0005449591280653951 0.0018259595078666938 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 107532 17321 SVPDPELIKTV True PC9_epitope_Rep3 1196.66525416012 1196.66414993586 71.799 2 0.1718729611844517 0.0005449591280653951 0.0018260521654465082 ['ENSG00000073756|ENST00000367468|PTGS2'] 107748 5576 SVSNVVITK True NCI_RA007_Epitope_Rep4 945.54949613189 945.5489449679301 28.048 1 0.1718704960122678 0.0005449591280653951 0.0018261559856961296 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 130104 12975 VSDPLIGGTY True H1975_Epitope_Rep3 1020.5127762699999 1020.51227496793 55.142 1 0.17186531253290357 0.0005449591280653951 0.0018263743061959859 ['ENSG00000169359|ENST00000643144|SLC33A1'] 41216 16189 HVLDVIHEV True PC9_epitope_Rep1 1059.57129420563 1059.57018993586 67.088 2 0.1718648408441818 0.0005449591280653951 0.001826394174325262 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 56626 10035 LDIDSPPITAR True NCI_RA007_Epitope_Rep4 1196.6401020414398 1196.63900993586 45.442 2 0.1718590924232691 0.0005449591280653951 0.001826636322510842 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 29377 20655 FVDPAQITM True PC9_epitope_Rep3 1020.49501803088 1020.49392993586 84.722 2 0.17181709290367392 0.0005449591280653951 0.0018284064978904397 ['ENSG00000167325|ENST00000300738|RRM1'] 104196 20071 SQFQQEFPSL True PC9_epitope_Rep4 1209.5666027480097 1209.56550993586 85.339 2 0.17181630224171 0.0005449591280653951 0.0018284398387854491 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 76956 9754 NRDTQETLL True PC9_epitope_Rep5 1088.5462016566 1088.5451099358602 42.489 2 0.17181602397083595 0.0005449591280653951 0.0018284515731483778 ['nc|ENSG00000197905|Q15561-2|TEAD4', 'nc|ENSG00000187079|P28347-2|TEAD1', 'nc|ENSG00000197905|Q15561-3|TEAD4', 'ENSG00000187079|ENST00000527636|TEAD1', 'ENSG00000197905|ENST00000359864|TEAD4'] 8116 8874 ATEDPWKTNY True H1975_Epitope_Rep3 1223.54586730343 1223.5447699358601 39.136 2 0.17180973681783912 0.0005449591280653951 0.0018287167152517905 ['ENSG00000139684|ENST00000378720|ESD'] 22306 9867 ETDKNGFLQY True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 42.982 2 0.171804782597317 0.0005449591280653951 0.0018289256719706683 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 141983 22069 YVITDLTQL True PC9_epitope_Rep1 1064.57537652656 1064.57426993586 89.698 2 0.1717975870140847 0.0005449591280653951 0.0018292292063572843 ['ENSG00000134070|ENST00000256458|IRAK2'] 94897 11058 RTDYGQVFTY True H1975_Epitope_Rep2 1248.5775017848798 1248.57640993586 47.565 2 0.1717958551981385 0.0005449591280653951 0.0018293022678215708 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 138380 13169 YHGEVPVSL True PC9_epitope_Rep4 999.5025459394699 999.50144993586 58.552 2 0.17179253662275756 0.0005449591280653951 0.001829442279298146 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 111135 11698 THFHELTAL True PC9_epitope_Rep2 1067.53999407735 1067.5388899358602 50.329 2 0.17178716549202397 0.0005449591280653951 0.0018296689112932165 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 117379 14120 TVPKPDVVVQV True PC9_epitope_Rep4 1179.68632395787 1179.6852299358602 62.218 2 0.17178642255596024 0.0005449591280653951 0.0018297002612957633 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 108946 8769 TADVHGLYY True H1975_Epitope_Rep1 1037.48181049489 1037.4807099358602 38.66 2 0.17178596850925212 0.0005449591280653951 0.001829719421170712 ['ENST00000476493.5_1_1:33099602-33116090:-|nuORF'] 115267 13727 TREGGSIPVTL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 58.09 2 0.1717850868580805 0.0005449591280653951 0.0018297566256835233 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 103938 17313 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51234993586 71.853 2 0.17178425448399626 0.0005449591280653951 0.0018297917514632162 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 7604 17198 ASFNDTFVHV True PC9_epitope_Rep4 1135.5298233164701 1135.5287299358602 74.158 2 0.17178343296891024 0.0005449591280653951 0.0018298264196601396 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 72283 8513 MIDETRNSLY True H1975_Epitope_Rep1 1240.5757875327201 1240.57468993586 37.675 2 0.17178108205478435 0.0005449591280653951 0.0018299256326131646 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 11730 5584 DHASIQM[Oxidation]NV True PC9_epitope_Rep2 1029.45494450449 1029.45384993586 26.868 2 0.17178050409922793 0.0005449591280653951 0.0018299500242380605 ['ENSG00000171858|ENST00000343986|RPS21'] 62181 10885 LLENTAITIGR True NCI_RA007_Epitope_Rep1 1199.68738658703 1199.68628993586 46.332 2 0.17177938358627032 0.0005449591280653951 0.0018299973144961798 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000589149.5_3_19:12812449-12813652:-|nuORF', 'ENST00000587155.1_1_19:12812547-12813748:-|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2'] 25406 11817 FEDENFILK True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 50.601 2 0.1717749923378996 0.0005449591280653951 0.0018301826550371268 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 88681 4706 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 23.194 2 0.17177473928451287 0.0005449591280653951 0.0018301933361831893 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 116276 11946 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.49807496793 51.106 1 0.1717746709838064 0.0005449591280653951 0.001830196219102628 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 18360 8694 EITALAPSTM[Oxidation]K True PC9_epitope_Rep2 1176.6060254122801 1176.6049299358601 38.805 2 0.17177106302024445 0.0005449591280653951 0.0018303485148854347 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77578 12779 NTDPSIVMTY True H1975_Epitope_Rep3 1139.51687567427 1139.51637496793 54.371 1 0.17176652558305786 0.0005449591280653951 0.001830540062691747 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 27862 21095 FQDPVPLTV True PC9_epitope_Rep1 1014.5385970950199 1014.53807496793 85.973 1 0.1717646356432277 0.0005449591280653951 0.0018306198523759037 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 140525 20074 YRNEFTAWY True PC9_epitope_Rep1 1248.55637241748 1248.55526993586 82.043 2 0.17176443866598856 0.0005449591280653951 0.00183062816858256 ['nc|ENSG00000232388|A0A096LP01-2|SMIM26', 'ENSG00000232388|ENST00000411646|SMIM26'] 21204 10235 ERDPATYNI True PC9_epitope_Rep1 1077.5090878718902 1077.50798993586 44.25 2 0.1717627828604931 0.0005449591280653951 0.0018306980767362152 ['ENSG00000138246|ENST00000260818|DNAJC13'] 90789 4170 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 22.34 2 0.17175646037674108 0.0005449591280653951 0.001830965036751822 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 68076 13077 LTDLVPNTEY True H1975_Epitope_Rep2 1163.57101942211 1163.56992993586 55.423 2 0.1717562283053041 0.0005449591280653951 0.0018309748364576056 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 11740 12093 DHASIQMNV True PC9_epitope_Rep3 1013.46002950449 1013.4589299358599 51.557 2 0.17175488204657763 0.0005449591280653951 0.0018310316861065476 ['ENSG00000171858|ENST00000343986|RPS21'] 141681 10518 YTTDRVMTV True PC9_epitope_Rep2 1084.5222954078802 1084.52118993586 45.779 2 0.17175334967255002 0.0005449591280653951 0.0018310963971592499 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 98378 7322 SEYQQYQDATA True H1975_Epitope_Rep2 1302.53642481854 1302.53532993586 33.104 2 0.17174856225149912 0.0005449591280653951 0.001831298581250405 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 14103 20218 DRYQYPFVL True PC9_epitope_Rep4 1199.5975089534697 1199.59640993586 85.908 2 0.17174620900140833 0.0005449591280653951 0.0018313979727459207 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 137990 21897 YFQNTQGLIF True PC9_epitope_Rep5 1229.6080736371698 1229.6069699358602 89.264 2 0.1717449894170725 0.0005449591280653951 0.0018314494850391913 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 90985 16719 RFEEAHFTF True PC9_epitope_Rep1 1182.5458077337796 1182.54415490379 69.138 3 0.17174270294086066 0.0005449591280653951 0.0018315460641728616 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 4005 13724 AHELVTSKIAL True PC9_epitope_Rep3 1180.6815729306 1180.67992490379 57.871 3 0.1717417998938986 0.0005449591280653951 0.001831584209640074 ['ENSG00000011454|ENST00000373647|RABGAP1', 'nc|ENSG00000152061|Q5R372-7|RABGAP1L', 'nc|ENSG00000152061|Q5R372-6|RABGAP1L', 'nc|ENSG00000152061|Q5R372-5|RABGAP1L', 'nc|ENSG00000152061|B7ZAP0|RABGAP1L', 'ENST00000469553.6_1_1:174927262-174959135:+|nuORF', 'nc|ENSG00000152061|Q5R372-8|RABGAP1L', 'ENSG00000152061|ENST00000681986|RABGAP1L'] 89525 14551 QYLGQIQHI True PC9_epitope_Rep5 1098.5821932425 1098.58108993586 60.97 2 0.17173727769402963 0.0005449591280653951 0.0018317752431455834 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 29166 11517 FTQGHIVEV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 49.626 2 0.17173514560207323 0.0005449591280653951 0.0018318653170674235 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 32820 7934 GHLEKAVVL True PC9_epitope_Rep2 964.5705659296399 964.56946993586 35.884 2 0.17172856502428044 0.0005449591280653951 0.0018321433529402105 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 110999 12970 THASQIELL True PC9_epitope_Rep4 1010.5396597241798 1010.53856993586 57.782 2 0.17172714304330813 0.0005449591280653951 0.0018322034385808476 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 17442 5507 EHDTTEYKL True PC9_epitope_Rep4 1134.51931820242 1134.51766490379 27.942 3 0.1717262558485748 0.0005449591280653951 0.0018322409278901108 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 78297 18464 NYINDLRNF True PC9_epitope_Rep4 1167.56727145435 1167.5661699358602 79.091 2 0.17172056321390522 0.0005449591280653951 0.0018324814941813729 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 43853 12035 IHSQPQPALL True PC9_epitope_Rep5 1102.61349337078 1102.6123899358602 51.287 2 0.17172020943656247 0.0005449591280653951 0.0018324964455784987 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 68179 7661 LTDRGVMSY True H1975_Epitope_Rep1 1040.49608066004 1040.49498993586 34.443 2 0.1717172197564005 0.0005449591280653951 0.0018326228008156537 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 66016 8257 LSEDYGVLK True H1975_Epitope_Rep1 1022.5284263341399 1022.5273299358599 36.699 2 0.1717162703495726 0.0005449591280653951 0.001832662928177604 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 140657 16485 YRTDMIQAL True PC9_epitope_Rep2 1109.55392988933 1109.55282993586 68.652 2 0.17171078281120772 0.0005449591280653951 0.0018328948801595696 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 54819 12576 KYPDRVPVI True PC9_epitope_Rep5 1085.62332977849 1085.62222993586 53.373 2 0.17171063586106203 0.0005449591280653951 0.0018329010919783393 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 89326 21275 QWPPDPPLHF True PC9_epitope_Rep1 1232.59784330664 1232.59674993586 86.66 2 0.17170765012657827 0.0005449591280653951 0.0018330273083349733 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 14459 17123 DTEPPPLLVY True H1975_Epitope_Rep2 1142.5859412102598 1142.5848499358601 71.138 2 0.17170678563948058 0.0005449591280653951 0.001833063854538391 ['ENSG00000174231|ENST00000304992|PRPF8'] 107036 4859 SVFQTTDTK True NCI_RA007_Epitope_Rep5 1025.5029398622898 1025.50184993586 25.381 2 0.17170451378042684 0.0005449591280653951 0.0018331599008858275 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 35029 19327 GQVEDVVGNL True PC9_epitope_Rep2 1028.5138388991597 1028.51274993586 79.716 2 0.17170396046375117 0.0005449591280653951 0.0018331832939648051 ['ENSG00000196878|ENST00000356082|LAMB3'] 99197 19098 SHLDYDITL True PC9_epitope_Rep5 1075.5185899264302 1075.51807496793 78.49 1 0.17169297393429198 0.0005449591280653951 0.0018336478434538414 ['ENSG00000163960|ENST00000296328|UBXN7'] 76906 13179 NRDNVGLVL True PC9_epitope_Rep4 998.5508931142199 998.54978993586 58.591 2 0.17168728778837283 0.0005449591280653951 0.0018338883201620103 ['ENSG00000013523|ENST00000251089|ANGEL1'] 134185 22812 VYLPPEAFTF True PC9_epitope_Rep3 1182.5961119711399 1182.5950099358602 93.017 2 0.17168332994139915 0.0005449591280653951 0.0018340557228194675 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 138261 13798 YGYPDPSYL True H1975_Epitope_Rep1 1073.47057710485 1073.47007496793 58.218 1 0.17167916817832765 0.0005449591280653951 0.001834231766886767 ['ENSG00000163840|ENST00000296161|DTX3L', 'nc|ENSG00000163840|Q8TDB6-2|DTX3L'] 7854 4530 ATAAAIGATPR True NCI_RA007_Epitope_Rep4 998.55089311422 998.54978993586 23.82 2 0.17167530523449434 0.0005449591280653951 0.0018343951859255989 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000540626.5_1_11:71714575-71718510:-|nuORF'] 70761 8949 LYADVGGKQF True NCI_RA007_Epitope_Rep3 1096.55530978832 1096.5542099358602 42.291 2 0.17166489372015253 0.0005449591280653951 0.0018348357100516411 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 34568 3678 GPSSVEDIKAK True NCI_RA007_Epitope_Rep5 1129.5979028762897 1129.5962549037902 20.182 3 0.1716616232288159 0.0005449591280653951 0.0018349741104585384 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 33240 12505 GKFEKLIVAL True NCI_RA007_Epitope_Rep4 1116.6906810623198 1116.68958993586 55.116 2 0.1716614118087115 0.0005449591280653951 0.0018349830576781334 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 86686 19926 QLIKELPEL True PC9_epitope_Rep1 1081.63831113629 1081.63720993586 81.464 2 0.17164878703529743 0.0005449591280653951 0.0018355174125049896 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 40546 9682 HRFPTVAV True PC9_epitope_Rep2 925.5133854066898 925.5122899358599 42.582 2 0.17164321961795775 0.0005449591280653951 0.0018357531078971178 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 34178 16069 GNFNYVEFTR True PC9_epitope_Rep4 1245.5778361380499 1245.5767299358602 69.743 2 0.17163450919006082 0.0005449591280653951 0.0018361219227129761 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 106281 6172 STFDTQITK True NCI_RA007_Epitope_Rep3 1039.51858992643 1039.51748993586 31.281 2 0.17163412891410196 0.0005449591280653951 0.001836138025954128 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 137814 5577 YEQNDRLTP True H1975_Epitope_Rep3 1134.53055159246 1134.5294499358602 26.493 2 0.1716309698769499 0.0005449591280653951 0.0018362718046314084 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 27880 14629 FQDPYTRSL True PC9_epitope_Rep5 1125.54547338061 1125.54436993586 61.271 2 0.17162982068385918 0.0005449591280653951 0.0018363204729969292 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 78215 7675 NYGDQVQHF True NCI_RA007_Epitope_Rep5 1106.47812209678 1106.4770299358602 36.224 2 0.1716203755475585 0.0005449591280653951 0.0018367205237378678 ['ENSG00000154016|ENST00000284154|GRAP'] 70109 19457 LVPEFVHSI True PC9_epitope_Rep3 1039.57023157647 1039.56912993586 80.069 2 0.17161900537770414 0.0005449591280653951 0.0018367785648142885 ['nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENSG00000115183|ENST00000263635|TANC1'] 9746 10623 AYHELAQVY True PC9_epitope_Rep6 1092.5240096600398 1092.52290993586 51.679 2 0.17161769319776488 0.0005449591280653951 0.0018368341511295976 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3'] 17895 12663 EHYYNAISV True PC9_epitope_Rep4 1094.50327421546 1094.5021699358601 56.552 2 0.17161665454798775 0.0005449591280653951 0.0018368781514061544 ['ENSG00000198730|ENST00000361367|CTR9'] 60431 4452 LGVIEDHSNR True NCI_RA007_Epitope_Rep4 1138.5730851107799 1138.57144490379 23.499 3 0.17161198151599108 0.0005449591280653951 0.0018370761279111192 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 57485 10644 LEDFRVDPP True H1975_Epitope_Rep2 1086.53457434374 1086.53346993586 45.966 2 0.17160568721938482 0.0005449591280653951 0.0018373428242573595 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129121771-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-8|LARP1B', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B'] 46675 9136 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 40.093 2 0.17160132600368794 0.0005449591280653951 0.001837527636538751 ['ENSG00000170348|ENST00000303575|TMED10'] 139920 6542 YQAEAREAL True PC9_epitope_Rep4 1049.5141732523298 1049.5130699358601 32.291 2 0.17159882488486414 0.0005449591280653951 0.0018376336331490405 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 40167 20308 HQDSTWIVL True PC9_epitope_Rep3 1097.55055876105 1097.54946993586 83.362 2 0.1715963924202576 0.0005449591280653951 0.0018377367260847036 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 130134 8415 VSDSGISTDY True H1975_Epitope_Rep1 1042.44548455582 1042.44497496793 37.296 1 0.17159555915690886 0.0005449591280653951 0.0018377720428584268 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 107145 7389 SVIDTSTIVRK True NCI_RA007_Epitope_Rep1 1217.69795127073 1217.69629490379 32.736 3 0.17159555573935115 0.0005449591280653951 0.0018377721877085242 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 75243 15350 NIDYPVLY True H1975_Epitope_Rep2 995.49639792987 995.49530993586 64.202 2 0.17159342147868406 0.0005449591280653951 0.0018378626486513542 ['ENST00000593518.1_1_19:4007758-4017708:+|nuORF', 'ENST00000599999.5_1_19:4007758-4028181:+|nuORF', 'ENSG00000105229|ENST00000262971|PIAS4'] 74800 10416 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.4657899358601 45.387 2 0.1715922498750025 0.0005449591280653951 0.0018379123091349274 ['ENSG00000144597|ENST00000396842|EAF1'] 88901 7788 QVEPGALRY True H1975_Epitope_Rep2 1031.5399940773498 1031.5388899358602 34.903 2 0.17157967356026846 0.0005449591280653951 0.0018384454629401714 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 74804 11318 NHDTGEYVL True PC9_epitope_Rep3 1046.46688870674 1046.4657899358601 48.542 2 0.17157401793841442 0.0005449591280653951 0.0018386852749052737 ['ENSG00000144597|ENST00000396842|EAF1'] 107843 19961 SVVESVFKL True PC9_epitope_Rep2 1006.5698972232999 1006.56880993586 82.18 2 0.1715707291001345 0.0005449591280653951 0.0018388247439503898 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 114606 8974 TQDPTVTRL True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 39.465 2 0.17156532355673443 0.0005449591280653951 0.0018390539986458123 ['ENSG00000130827|ENST00000369682|PLXNA3'] 29727 11178 FVNDIFER True H1975_Epitope_Rep1 1038.5134449763398 1038.5123499358601 47.966 2 0.1715636806708948 0.0005449591280653951 0.0018391236808034956 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 64163 13781 LPFPIIDDR True H1975_Epitope_Rep1 1084.59169529704 1084.5905899358602 58.151 2 0.1715615231591422 0.0005449591280653951 0.0018392151945676987 ['ENSG00000117592|ENST00000340385|PRDX6', 'PRDX6|p.G138Vfs*6|1|0.08|ENSG00000117592|chr1:173486267-173486267|G/-|frameshift_variant'] 54723 14874 KYMDVQFDF True NCI_RA007_Epitope_Rep1 1191.52704643515 1191.5259499358601 61.915 2 0.17155579867476434 0.0005449591280653951 0.0018394580283612961 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 40763 15906 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.55843490379 69.11 3 0.17155350266787234 0.0005449591280653951 0.0018395554344560197 ['ENSG00000169813|ENST00000682386|HNRNPF'] 84218 21206 PYLFHVVTF True PC9_epitope_Rep2 1121.59096702105 1121.5898699358602 87.027 2 0.1715532445982057 0.0005449591280653951 0.0018395663831597677 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant'] 9968 22629 AYPEYLITF True PC9_epitope_Rep2 1115.55391280599 1115.55280993586 92.538 2 0.171549689666701 0.0005449591280653951 0.0018397172091169382 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP15|p.Q667E|1|0.22|ENSG00000173200|chr3:122636062-122636062|C/G|missense_variant', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 137845 6504 YESERVYVA True H1975_Epitope_Rep2 1114.5294889633 1114.52838993586 29.934 2 0.1715470990141342 0.0005449591280653951 0.0018398271311683384 ['ENSG00000145391|ENST00000274031|SETD7'] 61935 10672 LLDIRSEY True H1975_Epitope_Rep2 1007.5287606873101 1007.52766993586 46.075 2 0.17154587864483403 0.0005449591280653951 0.0018398789140272368 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 142759 19423 YYQRGSSMVLF True PC9_epitope_Rep5 1349.64380752289 1349.64270993586 79.76 2 0.17154215733198216 0.0005449591280653951 0.001840036826232302 ['ENSG00000171867|ENST00000379440|PRNP'] 32768 10099 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.46030993586 43.83 2 0.1715381048254884 0.0005449591280653951 0.0018402088079146248 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 37883 11631 GYSEHFVEF True NCI_RA007_Epitope_Rep3 1113.47672511445 1113.47562993586 52.872 2 0.17152626747994998 0.0005449591280653951 0.0018407112574293754 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 78604 17389 NYSNIRFQF True PC9_epitope_Rep6 1187.57235683479 1187.5712499358601 79.501 2 0.17152202268881195 0.0005449591280653951 0.0018408914658273052 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 11649 10176 DGNASGTTLLE True H1975_Epitope_Rep3 1076.49858275784 1076.4974899358601 44.186 2 0.17151037097377295 0.0005449591280653951 0.001841386218581169 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 138382 12341 YHGEVPVSL True PC9_epitope_Rep6 999.5025459394699 999.50144993586 58.871 2 0.17150490372856803 0.0005449591280653951 0.0018416184134977527 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 21265 11546 ERDSALETL True PC9_epitope_Rep5 1032.50875351872 1032.5076499358602 49.408 2 0.17150172463834826 0.0005449591280653951 0.0018417534435197997 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 136428 20333 WVDPNSPVL True PC9_epitope_Rep1 1025.51819600361 1025.51767496793 83.041 1 0.17150145754308888 0.0005449591280653951 0.0018417647886879147 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 125923 20112 VLDDKLVFV True PC9_epitope_Rep2 1046.60119735158 1046.60010993586 82.769 2 0.17149512842985576 0.0005449591280653951 0.0018420336452731403 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 67989 10362 LTDFIQKY True H1975_Epitope_Rep2 1026.53859709502 1026.53750993586 44.866 2 0.17148415853226887 0.0005449591280653951 0.0018424997323691651 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 93701 14570 RQVEDLQATF True PC9_epitope_Rep5 1205.6040508858898 1205.6029499358601 61.042 2 0.17148296176587732 0.0005449591280653951 0.001842550587510066 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 24056 12220 EYNSDLHQF True PC9_epitope_Rep1 1151.4883524273098 1151.48724993586 51.864 2 0.17147953149750345 0.0005449591280653951 0.001842696360400359 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 47699 17207 IYAPKLQEF True PC9_epitope_Rep2 1107.59644632431 1107.5953499358602 71.444 2 0.17147490667450593 0.0005449591280653951 0.0018428929154243687 ['ENSG00000175305|ENST00000308108|CCNE2'] 107580 14909 SVPIDLQKV True PC9_epitope_Rep5 997.58079626017 997.57968993586 62.352 2 0.17146959591299113 0.0005449591280653951 0.001843118648720875 ['ENSG00000198056|ENST00000338193|PRIM1'] 6740 8155 AQATISFPK True NCI_RA007_Epitope_Rep4 961.5232813840499 961.52218993586 38.158 2 0.1714658461330709 0.0005449591280653951 0.0018432780493420726 ['ENSG00000094804|ENST00000209728|CDC6'] 114019 6347 TPAQYDASELK True NCI_RA007_Epitope_Rep5 1221.58773211541 1221.5866299358602 31.088 2 0.1714634675155615 0.0005449591280653951 0.0018433791699224828 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 139280 19375 YLKDLIEEV True PC9_epitope_Rep4 1120.6015912743999 1120.6004899358602 82.636 2 0.1714619046238326 0.0005449591280653951 0.0018434456151185856 ['ENSG00000128272|ENST00000674920|ATF4', 'ATF4|p.Y333_K335dup|1|0.36|ENSG00000128272|chr22:39522540-39522541|-/AGTACCTGA|inframe_insertion'] 38818 14651 HHALPITDL True PC9_epitope_Rep3 1015.54507945779 1015.5439899358599 61.489 2 0.17145910695111033 0.0005449591280653951 0.0018435645621083716 ['ENSG00000065268|ENST00000585809|WDR18'] 40767 18333 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.55843490379 75.533 3 0.17145622411439093 0.0005449591280653951 0.0018436871379996428 ['ENSG00000169813|ENST00000682386|HNRNPF'] 87722 6447 QRAITGASL True PC9_epitope_Rep6 915.5137793295099 915.51268993586 33.428 2 0.17145501244024525 0.0005449591280653951 0.0018437386598408715 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 127173 9884 VLVDQTTGLSR True PC9_epitope_Rep4 1187.65100107831 1187.64990993586 45.67 2 0.17145259792913264 0.0005449591280653951 0.0018438413320519176 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 140704 7181 YSADREDLY True H1975_Epitope_Rep2 1130.48801807414 1130.4869299358602 32.555 2 0.17144968261713003 0.0005449591280653951 0.0018439653074343461 ['ENSG00000174231|ENST00000304992|PRPF8'] 95896 16704 RYLDLFTSF True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 73.521 2 0.1714432116138533 0.0005449591280653951 0.0018442405205168068 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 114711 12986 TQIDHYVGI True PC9_epitope_Rep6 1044.52400966004 1044.52290993586 61.526 2 0.17144078156832787 0.0005449591280653951 0.0018443438814617445 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 118642 16038 TYSPALNKMF True PC9_epitope_Rep6 1170.5743309807401 1170.5732299358601 74.014 2 0.17143930317465358 0.0005449591280653951 0.0018444067671391385 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 106928 10186 SVDSHFQEV True PC9_epitope_Rep1 1046.4668887067398 1046.4657899358601 44.059 2 0.17143684293174757 0.0005449591280653951 0.0018445114219926334 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 41402 13821 HYGKVYLL True PC9_epitope_Rep5 991.5491022090698 991.54800993586 58.181 2 0.17143664199939673 0.0005449591280653951 0.001844519969600447 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 140343 13366 YRDPNTIETL True PC9_epitope_Rep1 1220.60371653272 1220.60260993586 56.272 2 0.17143343844247044 0.0005449591280653951 0.0018446562533987116 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 141860 21656 YVDPLDPSF True PC9_epitope_Rep5 1051.48622716899 1051.4851299358602 88.346 2 0.17143256711630456 0.0005449591280653951 0.0018446933225770765 ['ENST00000472446.1_1_17:17412858-17494940:-|nuORF', 'nc|ENSG00000133027|Q9UBM1|PEMT', 'nc|ENSG00000133027|Q9UBM1-3|PEMT', 'ENSG00000133027|ENST00000255389|PEMT'] 76446 14916 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.52857496793 62.637 1 0.17142984481857584 0.0005449591280653951 0.001844809143183332 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 93624 5840 RQQEVETEL True NCI_RA007_Epitope_Rep5 1130.5567663402999 1130.5556699358601 29.148 2 0.17142719882011173 0.0005449591280653951 0.001844921724598469 ['ENSG00000104852|ENST00000598441|SNRNP70', 'nc|ENSG00000104852|P08621-3|SNRNP70', 'nc|ENSG00000104852|P08621-2|SNRNP70'] 19433 9884 ELNEFLTR True H1975_Epitope_Rep3 1020.52400966004 1020.52290993586 43.05 2 0.1714235943684049 0.0005449591280653951 0.0018450750971526683 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 128423 7593 VPRQPTVTSV True PC9_epitope_Rep4 1082.60840799034 1082.60730993586 36.588 2 0.1714233214928336 0.0005449591280653951 0.0018450867087649934 ['ENSG00000163110|ENST00000317968|PDLIM5'] 35816 10500 GTITTFEHA True PC9_epitope_Rep5 975.4661604307499 975.46506993586 45.375 2 0.17142037165085658 0.0005449591280653951 0.0018452122373899108 ['ENSG00000167658|ENST00000309311|EEF2'] 106495 19156 STLHLVLRL True PC9_epitope_Rep1 1050.65496425994 1050.65386993586 78.477 2 0.17141765483241705 0.0005449591280653951 0.0018453278574082524 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 97412 11514 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43816993586 49.346 2 0.1714122151195994 0.0005449591280653951 0.001845559377809064 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 108387 20467 SYLESFYHM True PC9_epitope_Rep3 1175.49574630687 1175.49464993586 83.984 2 0.17141085326948474 0.0005449591280653951 0.0018456173442571839 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 44788 17938 IMLEALERV True PC9_epitope_Rep6 1072.59506642532 1072.59396993586 81.625 2 0.17140859793391738 0.0005449591280653951 0.0018457133454599462 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 45691 13903 IRKPYIWEY True PC9_epitope_Rep6 1266.67609362734 1266.6744449037901 65.316 3 0.17140786119907725 0.0005449591280653951 0.0018457447065903018 ['ENSG00000136628|ENST00000366923|EPRS1'] 86095 13079 QHSVPLQL True PC9_epitope_Rep5 920.50796567308 920.50686993586 55.314 2 0.17140607410225053 0.0005449591280653951 0.0018458207814624342 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 96034 20694 RYLPTGSFPF True PC9_epitope_Rep3 1183.6025943339098 1183.6014899358602 84.873 2 0.17140533945745684 0.0005449591280653951 0.001845852055445015 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 18348 6755 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.60547496793 30.935 1 0.17140403513603159 0.0005449591280653951 0.0018459075819873998 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 134024 10163 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5281849037901 44.079 3 0.17139728507657878 0.0005449591280653951 0.0018461949669001038 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 93386 8904 RQAPIPAEL True NCI_RA007_Epitope_Rep1 993.5607295219298 993.55962993586 38.634 2 0.171393899186591 0.0005449591280653951 0.0018463391385950493 ['ENSG00000169583|ENST00000494426|CLIC3'] 7147 5800 AQYEDIANR True NCI_RA007_Epitope_Rep2 1078.5043368446197 1078.5032299358602 27.178 2 0.17138574960102093 0.0005449591280653951 0.0018466861953438845 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 133705 17166 VYAVIPAEKF True PC9_epitope_Rep4 1135.62774645259 1135.62664993586 74.036 2 0.17137989519922547 0.0005449591280653951 0.0018469355501100487 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 21252 6380 ERDQAVQAL True PC9_epitope_Rep4 1028.5250722891997 1028.5239699358601 31.627 2 0.17136891327345413 0.0005449591280653951 0.0018474033908369126 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 41211 20806 HVLDTLIQL True PC9_epitope_Rep2 1050.60734536118 1050.6062499358602 85.472 2 0.17135980922662905 0.0005449591280653951 0.0018477913219938629 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 47698 17999 IYAPKLQEF True PC9_epitope_Rep1 1107.59644632431 1107.5953499358602 74.027 2 0.1713589988530606 0.0005449591280653951 0.0018478258566495072 ['ENSG00000175305|ENST00000308108|CCNE2'] 24122 12717 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep6 1300.57578791316 1300.57468993586 60.396 2 0.17134914119238318 0.0005449591280653951 0.0018482459997045447 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 40665 10236 HRQEIQVVL True PC9_epitope_Rep4 1120.63529144452 1120.6341899358601 47.051 2 0.17134737075474438 0.0005449591280653951 0.0018483214675983207 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 118628 18454 TYSPALNKMF True PC9_epitope_Rep1 1170.5743309807401 1170.5732299358601 75.775 2 0.17134116037388736 0.0005449591280653951 0.0018485862199489615 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 86048 10834 QHQSGIVQL True PC9_epitope_Rep5 1008.5352430500798 1008.53414993586 46.66 2 0.17133819167300499 0.0005449591280653951 0.0018487127908963343 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 89411 20432 QYASAFHFL True PC9_epitope_Rep1 1082.51853035678 1082.51742993586 83.404 2 0.1713337570741531 0.0005449591280653951 0.001848901876746139 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 2432 10785 AEQIARWIA True H1975_Epitope_Rep3 1056.5716285587998 1056.5705299358601 46.564 2 0.17133332434468262 0.0005449591280653951 0.0018489203288357158 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 48361 12200 IYTFPHSAF True NCI_RA007_Epitope_Rep3 1081.5232813840498 1081.52218993586 55.122 2 0.17133117474469736 0.0005449591280653951 0.0018490119930187952 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 105655 14574 SSEELPLYY True H1975_Epitope_Rep1 1099.5073565363898 1099.50624993586 61.264 2 0.17133056146247197 0.0005449591280653951 0.0018490381457015297 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 116259 11999 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 51.161 1 0.17132690132419026 0.0005449591280653951 0.0018491942355922375 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 77900 22040 NVIESFTEL True PC9_epitope_Rep1 1050.5233409537 1050.5222499358601 89.591 2 0.17132180253672155 0.0005449591280653951 0.0018494116999499299 ['nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'ENSG00000197562|ENST00000248139|RAB40C'] 76402 12150 NQDDSILKV True PC9_epitope_Rep4 1030.5294889632999 1030.52838993586 54.552 2 0.17131668725410698 0.0005449591280653951 0.0018496298935437253 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 74171 5392 NEEEIRANVA True H1975_Epitope_Rep1 1143.55201531303 1143.55090993586 25.797 2 0.1713149986571249 0.0005449591280653951 0.0018497019267037281 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 133657 10905 VYANGIRNI True PC9_epitope_Rep5 1018.5559784946599 1018.55488993586 46.933 2 0.1713135425895202 0.0005449591280653951 0.001849764042743133 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 68120 11602 LTDPIQGTEY True H1975_Epitope_Rep1 1135.53971929383 1135.53917496793 49.616 1 0.17130761226278127 0.0005449591280653951 0.001850017052841159 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 95683 14358 RYFENPQVI True PC9_epitope_Rep4 1164.5927579262 1164.5916699358602 63.135 2 0.1713040166985511 0.0005449591280653951 0.0018501704700300803 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 21355 17026 ERFNVPVSL True PC9_epitope_Rep6 1059.5712942056298 1059.57018993586 78.043 2 0.1713034316797995 0.0005449591280653951 0.0018501954330835103 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 45050 19549 IPHLLGDVV True PC9_epitope_Rep2 961.55966689277 961.55856993586 80.578 2 0.17130023827092178 0.0005449591280653951 0.0018503317034370625 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 7129 18098 AQWDIGIAHA True PC9_epitope_Rep3 1080.53524305008 1080.5341499358601 74.81 2 0.17130019157488505 0.0005449591280653951 0.0018503336961425336 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'nc|ENSG00000147548|Q9BZ95-2|NSD3'] 10022 7970 AYRQGHFTY True PC9_epitope_Rep1 1141.53049202281 1141.52938993586 35.478 2 0.17130007479918424 0.0005449591280653951 0.0018503386794351893 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 96094 11039 RYMEVSGNL True PC9_epitope_Rep4 1067.5069796969099 1067.50588993586 50.237 2 0.17129136000733938 0.0005449591280653951 0.0018507106128410353 ['ENSG00000183431|ENST00000373019|SF3A3'] 106747 16141 STYEGKPIFL True PC9_epitope_Rep4 1153.60192562757 1153.60082993586 70.026 2 0.17129092624326497 0.0005449591280653951 0.0018507291271536942 ['ANKEF1|p.K510Rfs*11|1|0.36|ENSG00000132623|chr20:10050094-10050094|A/-|frameshift_variant', 'ANKEF1|p.A631Cfs*6|1|0.37|ENSG00000132623|chr20:10053129-10053130|-/T|frameshift_variant', 'ENSG00000132623|ENST00000378392|ANKEF1'] 131650 6875 VTLTSEEEAR True PC9_epitope_Rep3 1133.5564319871298 1133.55532993586 31.46 2 0.1712851572502935 0.0005449591280653951 0.0018509753821823129 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 53056 11119 KPNPNQIISV True PC9_epitope_Rep4 1108.62405805448 1108.62296993586 50.547 2 0.17128329127954336 0.0005449591280653951 0.0018510550399607221 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 26406 14107 FHYEADGANVL True PC9_epitope_Rep6 1234.5618517207397 1234.56074993586 66.134 2 0.1712813692899896 0.0005449591280653951 0.0018511370927528077 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 103953 17665 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51234993586 72.962 2 0.17126459914592235 0.0005449591280653951 0.0018518531913256251 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 109880 4561 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 22.651 2 0.17126351701029555 0.0005449591280653951 0.001851899408902222 ['ENSG00000077721|ENST00000371558|UBE2A'] 9503 6914 AVVTQVNKV True PC9_epitope_Rep3 956.5654805492 956.56438993586 31.607 2 0.17126238741813282 0.0005449591280653951 0.0018519476545595947 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 140933 11406 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.5015099358602 48.852 2 0.17126070284474168 0.0005449591280653951 0.0018520196061829334 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 87782 15174 QRDFNSELL True PC9_epitope_Rep5 1120.5512870370399 1120.55018993586 63.375 2 0.17124908324419802 0.0005449591280653951 0.0018525159796172522 ['ENSG00000042429|ENST00000251871|MED17', 'MED17|p.C601*|1|0.39|ENSG00000042429|chr11:93811909-93811910|TG/-|frameshift_variant', 'MED17|p.H347Ifs*25|1|0.19|ENSG00000042429|chr11:93796435-93796435|C/-|frameshift_variant'] 137720 6563 YEMLANRTA True H1975_Epitope_Rep2 1067.5069796969099 1067.50588993586 30.155 2 0.1712388944958632 0.0005449591280653951 0.0018529513385438386 ['ENSG00000101310|ENST00000650089|SEC23B'] 111443 7882 THTQPGVQL True PC9_epitope_Rep1 979.5086939490698 979.50758993586 35.146 2 0.17123599078185933 0.0005449591280653951 0.0018530754311958278 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 53331 16729 KQM[Oxidation]EQISQFL True PC9_epitope_Rep5 1266.62782348602 1266.62672993586 69.354 2 0.1712273051981812 0.0005449591280653951 0.0018534466665361235 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 136435 20260 WVDPNSPVL True PC9_epitope_Rep5 1025.51819600361 1025.51767496793 82.979 1 0.17122466864138913 0.0005449591280653951 0.0018535593717926386 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 127288 17087 VMAPRTVLL True PC9_epitope_Rep1 998.5946725024999 998.59356993586 70.55 2 0.17121673189166214 0.0005449591280653951 0.0018538986865221433 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 1226 5957 AEDDRHYNIP True H1975_Epitope_Rep3 1228.54726428576 1228.54561490379 27.926 3 0.17121653572426498 0.0005449591280653951 0.0018539070739270953 ['ENSG00000154124|ENST00000284274|OTULIN'] 56859 19330 LDPHLVLDQLR True PC9_epitope_Rep2 1317.7404847890498 1317.73882490379 79.727 3 0.1712125074707333 0.0005449591280653951 0.0018540793158035515 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 10146 5764 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep3 1119.5171508382302 1119.51604993586 29.655 2 0.17120765540269897 0.0005449591280653951 0.0018542868039708388 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 25249 7348 FDKDGNGYISA True H1975_Epitope_Rep1 1185.53021723929 1185.52912993586 33.273 2 0.17120656228927164 0.0005449591280653951 0.0018543335518027909 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000585658.1_1_17:68237680-68237866:+|nuORF'] 131458 17427 VTITGIVKV True PC9_epitope_Rep5 928.59571804832 928.59462993586 72.033 2 0.17119978462792512 0.0005449591280653951 0.001854623430000626 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 52602 21719 KLLEPVLLL True PC9_epitope_Rep3 1036.68961843316 1036.68852993586 88.836 2 0.17119849023080683 0.0005449591280653951 0.0018546787960677965 ['ENSG00000105193|ENST00000251453|RPS16'] 77497 5727 NTDEM[Oxidation]VELR True NCI_RA007_Epitope_Rep2 1121.5022886197298 1121.50118993586 26.893 2 0.17119448477791852 0.0005449591280653951 0.0018548501343169158 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000483135.1_1_9:86591819-86593167:-|nuORF'] 46669 8786 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.5496749679298 38.723 1 0.17118552965918862 0.0005449591280653951 0.0018552332579949901 ['ENSG00000170348|ENST00000303575|TMED10'] 136911 16540 YAFPKAVSV True PC9_epitope_Rep5 980.5331177917599 980.53202993586 68.623 2 0.17118411447324144 0.0005449591280653951 0.0018552938106401265 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 9317 4427 AVQRTLLEK True NCI_RA007_Epitope_Rep1 1056.6291434349198 1056.6280499358602 21.331 2 0.17117702216594027 0.0005449591280653951 0.0018555973044166415 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 16118 9243 EEALPVTTA True H1975_Epitope_Rep3 929.47057710485 929.47002496793 40.545 1 0.17117480257454798 0.0005449591280653951 0.0018556922953030012 ['ENSG00000184897|ENST00000333762|H1-10'] 38873 5815 HHEAGVTAL True PC9_epitope_Rep1 933.4668291370899 933.4657299358599 27.184 2 0.17116633085250996 0.0005449591280653951 0.0018560549006323116 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 110013 9336 TEITHAVVI True H1975_Epitope_Rep2 981.5494961318899 981.54838993586 40.871 2 0.17116081388373436 0.0005449591280653951 0.0018562910751897326 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 108326 18909 SYKNGFLNL True PC9_epitope_Rep1 1054.54474510462 1054.54364993586 77.519 2 0.17115437503551365 0.0005449591280653951 0.0018565667522854057 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 54767 18053 KYNANFVTF True PC9_epitope_Rep3 1102.54474510462 1102.54364993586 74.64 2 0.17115202115047184 0.0005449591280653951 0.0018566675432977915 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 21185 5809 ERDM[Oxidation]SNVSL True PC9_epitope_Rep4 1065.47607387189 1065.4749699358601 29.201 2 0.17114943712868294 0.0005449591280653951 0.0018567781948407888 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 38501 6977 HERAIDFSP True NCI_RA007_Epitope_Rep4 1070.5145076055 1070.5134099358602 33.463 2 0.171143042046896 0.0005449591280653951 0.001857052069848051 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 45179 9795 IPQLNSKAV True PC9_epitope_Rep2 968.5654805492 968.56438993586 43.015 2 0.17114189830776044 0.0005449591280653951 0.001857101055744322 ['ENSG00000157456|ENST00000288207|CCNB2'] 24476 19038 FAEGFVRAL True PC9_epitope_Rep2 1008.5392658013598 1008.53816993586 78.595 2 0.17114156953513684 0.0005449591280653951 0.0018571151371854285 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 120279 6798 VEDHQEVLP True H1975_Epitope_Rep2 1064.51383889916 1064.51274993586 31.065 2 0.17113791420055185 0.0005449591280653951 0.0018572717035820598 ['ENSG00000082213|ENST00000325366|C5orf22', 'ENST00000511208.2_1_5:31532460-31535865:+|nuORF', 'ENST00000515409.5_1_5:31532460-31534525:+|nuORF'] 42391 10015 IEDFEARIA True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 43.514 2 0.17113789252046552 0.0005449591280653951 0.0018572726322294757 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 142859 15143 YYTDIM[Oxidation]HTL True PC9_epitope_Rep5 1171.5219614351497 1171.5208699358602 63.255 2 0.17113437545647922 0.0005449591280653951 0.0018574232887210915 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 73255 4493 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep3 1081.43862573401 1081.43752993586 22.402 2 0.1711268033314807 0.0005449591280653951 0.001857747688780171 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 117162 16754 TVLEEIGNRV True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 69.692 2 0.17112161064853437 0.0005449591280653951 0.0018579701830970488 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 71170 17184 LYMPKLLYF True NCI_RA007_Epitope_Rep3 1186.6460393690197 1186.64494993586 75.486 2 0.17111850533981723 0.0005449591280653951 0.0018581032510514351 ['nc|ENSG00000170786|Q8N3Y7-2|SDR16C5', 'ENSG00000170786|ENST00000303749|SDR16C5'] 141175 19611 YSVDRLYEL True PC9_epitope_Rep3 1156.5764391557198 1156.57534993586 80.67 2 0.1711083109432385 0.0005449591280653951 0.0018585401659659603 ['ENSG00000084774|ENST00000264705|CAD'] 131154 5783 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.52347496793 27.271 1 0.1711020915849734 0.0005449591280653951 0.0018588067678237546 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 130211 5650 VSESHGQLSY True H1975_Epitope_Rep3 1105.50400249145 1105.50290993586 26.763 2 0.17110043395061897 0.0005449591280653951 0.0018588778311951623 ['OTUD4|p.T948Nfs*31|1|0.15|ENSG00000164164|chr4:145137932-145137933|-/T|frameshift_variant', 'nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000237841.5_1_12:3950645-3951302:+|nuORF'] 105585 9236 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep1 1071.45427579815 1071.4531699358602 40.436 2 0.17110006956646015 0.0005449591280653951 0.0018588934528374719 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 17534 20621 EHGIVVFSL True PC9_epitope_Rep5 999.5389314481899 999.53782993586 84.369 2 0.17109927638464123 0.0005449591280653951 0.0018589274580703028 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 128387 17875 VPRPAVLDPAL True PC9_epitope_Rep1 1146.67609362734 1146.6749899358601 73.549 2 0.17109902178414202 0.0005449591280653951 0.001858938373416218 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 70769 12506 LYADVGGKQF True PC9_epitope_Rep4 1096.55530978832 1096.5542099358602 55.921 2 0.17109880316291767 0.0005449591280653951 0.0018589477462938263 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 131649 6299 VTLTSEEEAR True PC9_epitope_Rep2 1133.5564319871298 1133.55532993586 29.626 2 0.1710911802473398 0.0005449591280653951 0.0018592745906794912 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 31250 16912 GDEELDSLIK True PC9_epitope_Rep5 1117.5502839775297 1117.54918993586 70.066 2 0.17108938122722234 0.0005449591280653951 0.0018593517348569804 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 134901 19987 VYVSDIQEL True PC9_epitope_Rep3 1064.5389910178399 1064.5378899358602 82.125 2 0.17108760856077893 0.0005449591280653951 0.0018594277520895231 ['ENSG00000132182|ENST00000254508|NUP210'] 98973 9283 SHDDGNIDL True PC9_epitope_Rep1 984.41485313388 984.41374993586 40.561 2 0.17107924253485196 0.0005449591280653951 0.0018597865542455785 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 41065 4613 HTLNQIDSVK True PC9_epitope_Rep4 1153.6091362663299 1153.60802993586 24.254 2 0.17107721014401683 0.0005449591280653951 0.0018598737298912427 ['CON__P12763'] 58210 10629 LELEQTYQA True H1975_Epitope_Rep2 1093.52915461013 1093.52804993586 45.908 2 0.1710746598660895 0.0005449591280653951 0.001859983125130166 ['ENSG00000176619|ENST00000325327|LMNB2'] 64729 16456 LPWQGLKAA True PC9_epitope_Rep1 982.5600012459398 982.55890993586 68.123 2 0.1710696718082107 0.0005449591280653951 0.001860197108572016 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 76556 3898 NQKDPGVLDR True NCI_RA007_Epitope_Rep2 1140.58873517492 1140.5876299358601 19.797 2 0.17106596927479129 0.0005449591280653951 0.0018603559600357652 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 91590 21209 RILDIDIPLSV True PC9_epitope_Rep4 1252.7390878067201 1252.73798993586 89.744 2 0.17104558151374957 0.0005449591280653951 0.0018612309085358227 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 135443 12266 WHSDDEPSL True PC9_epitope_Rep5 1084.44615326216 1084.4450499358602 52.169 2 0.1710411540869187 0.0005449591280653951 0.0018614209676478684 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 96003 18904 RYLNEFEEL True PC9_epitope_Rep2 1211.5822528121498 1211.5811499358601 78.077 2 0.17102724650777762 0.0005449591280653951 0.0018620181139165335 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 21171 10146 ERDAYVQAL True PC9_epitope_Rep6 1063.52982331647 1063.5287299358602 49.647 2 0.17102637055578174 0.0005449591280653951 0.0018620557308655786 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 1358 7121 AEEAEILHSA True H1975_Epitope_Rep2 1068.5087535187201 1068.5076499358602 32.323 2 0.17102321461120018 0.0005449591280653951 0.0018621912662946038 ['ENSG00000169905|ENST00000609928|TOR1AIP2', 'TOR1AIP2|p.S241Lfs*68|1|0.42|ENSG00000169905|chr1:179846764-179846764|G/-|frameshift_variant'] 113499 13858 TLTEEGVIKV True PC9_epitope_Rep4 1087.6124903112698 1087.6113899358602 61.207 2 0.17101622801940072 0.0005449591280653951 0.0018624913480982145 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 53237 14294 KQFGNILIL True NCI_RA007_Epitope_Rep5 1044.6331661861998 1044.63206993586 61.674 2 0.17101129185515396 0.0005449591280653951 0.0018627033909512434 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 40984 11249 HTDVGLLEY True H1975_Epitope_Rep1 1045.50802524273 1045.5069299358602 48.245 2 0.1710071697177218 0.0005449591280653951 0.0018628804841553212 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 24060 12354 EYNSDLHQF True PC9_epitope_Rep3 1151.4883524273098 1151.48724993586 52.547 2 0.17099475116932158 0.0005449591280653951 0.0018634141054474594 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 9603 10976 AYAIIKEEL True NCI_RA007_Epitope_Rep4 1048.580461907 1048.57936993586 49.088 2 0.17098618939312837 0.0005449591280653951 0.0018637820914669658 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 111323 14166 THNIIVNQL True PC9_epitope_Rep3 1050.5821932425 1050.58108993586 59.575 2 0.17098331850285883 0.0005449591280653951 0.0018639054989032877 ['ENSG00000198356|ENST00000357332|GET3'] 61492 4403 LKDDEVAQLKK True NCI_RA007_Epitope_Rep1 1285.7241660185698 1285.7225249037901 21.241 3 0.1709832909985599 0.0005449591280653951 0.0018639066812363644 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 88037 13846 QRQDIAFAY True PC9_epitope_Rep2 1110.5458077337798 1110.54470993586 58.542 2 0.17097769875282257 0.0005449591280653951 0.001864147091867741 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 9510 5500 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 29.133 2 0.1709750202070783 0.0005449591280653951 0.0018642622535325175 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 36005 5710 GTYAPAEVPK True NCI_RA007_Epitope_Rep5 1031.5287606873098 1031.52766993586 28.651 2 0.1709733849489336 0.0005449591280653951 0.0018643325634849532 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 99044 20126 SHFEGLITTI True PC9_epitope_Rep1 1116.58152453616 1116.5804299358601 82.245 2 0.1709681427502002 0.0005449591280653951 0.0018645579762091749 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 90540 9066 RELVKNWVP True NCI_RA007_Epitope_Rep4 1139.64512785223 1139.64402993586 41.705 2 0.17095666709150464 0.0005449591280653951 0.0018650515207404524 ['ENSG00000127540|ENST00000591899|UQCR11'] 129929 13551 VRTPYTMSY True PC9_epitope_Rep3 1116.52738078832 1116.5262899358602 57.179 2 0.1709525542457311 0.0005449591280653951 0.0018652284376149129 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 58389 7748 LENMPSAEA True H1975_Epitope_Rep2 960.4222470134399 960.4216949679301 34.756 1 0.17094721098416882 0.0005449591280653951 0.0018654583067452472 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 128412 6799 VPRPPDTVST True PC9_epitope_Rep6 1067.56112344475 1067.56002993586 34.986 2 0.17094685933340867 0.0005449591280653951 0.0018654734358878346 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 44031 18912 IIIPEIQKV True PC9_epitope_Rep2 1051.66413196131 1051.66302993586 78.107 2 0.1709453706499136 0.0005449591280653951 0.001865537485182399 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 42135 18824 IDNNIEQISSY True PC9_epitope_Rep3 1294.60411045554 1294.6030099358602 77.629 2 0.1709416687398182 0.0005449591280653951 0.0018656967661388254 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 85820 13877 QHEEFVTSL True PC9_epitope_Rep2 1088.51383889916 1088.51274993586 58.66 2 0.17093950248949288 0.0005449591280653951 0.0018657899790418167 ['ENSG00000085872|ENST00000546361|CHERP'] 62724 22827 LLLPDYYLVTV True PC9_epitope_Rep4 1307.73769082439 1307.7365899358601 96.028 2 0.17093755952219636 0.0005449591280653951 0.001865873588127608 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 105606 9284 SSDPASQLSY True H1975_Epitope_Rep1 1053.46146897313 1053.4608749679298 40.623 1 0.17093497947327943 0.0005449591280653951 0.0018659846176799868 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 139063 10421 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.5333749679298 45.036 1 0.17093313535891685 0.0005449591280653951 0.0018660639811536996 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 30041 18356 FYGPQVNNI True PC9_epitope_Rep2 1050.51344497634 1050.5123499358601 75.937 2 0.17092808372691864 0.0005449591280653951 0.0018662814009469386 ['ENSG00000106299|ENST00000223023|WASL'] 76516 8729 NQIKKIENL True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 38.518 2 0.17091726799822612 0.0005449591280653951 0.0018667469899022564 ['nc|ENSG00000115685|Q15435-2|PPP1R7', 'ENSG00000115685|ENST00000234038|PPP1R7', 'nc|ENSG00000115685|Q15435-5|PPP1R7', 'nc|ENSG00000115685|Q15435-4|PPP1R7', 'nc|ENSG00000115685|Q15435-3|PPP1R7'] 35583 15724 GTAGLLEQWLK True NCI_RA007_Epitope_Rep4 1214.66592286646 1214.66482993586 68.287 2 0.17091258270781037 0.0005449591280653951 0.0018669487155295774 ['ENSG00000183624|ENST00000383463|HMCES'] 35359 7650 GRYAGEESL True PC9_epitope_Rep5 980.4563240230399 980.45522993586 34.371 2 0.1709077592085046 0.0005449591280653951 0.00186715641454016 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 9313 6537 AVQQPFINK True NCI_RA007_Epitope_Rep4 1043.5763795860698 1043.5752899358602 31.755 2 0.1709062687173515 0.0005449591280653951 0.0018672205994963197 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 90817 9021 RETETVFVP True H1975_Epitope_Rep1 1076.5502244078798 1076.54912993586 39.606 2 0.1708971597889833 0.0005449591280653951 0.0018676129048611572 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 77113 15301 NRMDYYNAL True PC9_epitope_Rep5 1158.51279335334 1158.5116899358602 63.865 2 0.17089674776868993 0.0005449591280653951 0.0018676306517927638 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 128419 8818 VPRQPTVTSV True PC9_epitope_Rep1 1082.60840799034 1082.60730993586 38.761 2 0.1708934839673673 0.0005449591280653951 0.0018677712393232171 ['ENSG00000163110|ENST00000317968|PDLIM5'] 134163 12704 VYLPLTSHI True NCI_RA007_Epitope_Rep5 1041.58588164061 1041.58478993586 55.53 2 0.17088656303908423 0.0005449591280653951 0.0018680693918351672 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 54864 20821 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 88.239 2 0.17088317832269367 0.0005449591280653951 0.0018682152222290742 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 76522 19371 NQINGSFAL True PC9_epitope_Rep3 962.48214484806 962.48104993586 79.734 2 0.1708801652401084 0.0005449591280653951 0.0018683450503761275 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 45437 18575 IQIMKVEEI True PC9_epitope_Rep1 1101.61038213629 1101.60928993586 76.236 2 0.17087960736424634 0.0005449591280653951 0.0018683690892040208 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 90495 6429 RELEQRVSL True NCI_RA007_Epitope_Rep4 1128.62512068364 1128.6234749037899 31.33 3 0.1708779014917569 0.0005449591280653951 0.0018684425970380534 ['ENSG00000160551|ENST00000261716|TAOK1', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 18178 4198 EILANDQGNR True NCI_RA007_Epitope_Rep2 1128.5523496662001 1128.5512499358601 20.969 2 0.17087528410832967 0.0005449591280653951 0.0018685553884601985 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 28689 12592 FSQPENQNLLY True H1975_Epitope_Rep3 1351.64083031743 1351.63972993586 53.637 2 0.17087458172699768 0.0005449591280653951 0.0018685856574773676 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2'] 138418 16854 YHIDVGTQTF True PC9_epitope_Rep2 1179.5560380643099 1179.5549499358601 70.077 2 0.17087274739056246 0.0005449591280653951 0.0018686647102421035 ['ENSG00000118496|ENST00000237281|FBXO30'] 115204 15712 TRDSLPVSL True PC9_epitope_Rep1 986.53965972418 986.53856993586 65.259 2 0.17087103997440836 0.0005449591280653951 0.0018687382962434909 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 116605 22088 TVADVVLWSV True PC9_epitope_Rep4 1087.59136094387 1087.59026993586 93.178 2 0.17086697335035492 0.0005449591280653951 0.001868913570759615 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 21879 13269 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45507496793 56.168 1 0.170863753472003 0.0005449591280653951 0.0018690523615752662 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 76171 8067 NNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 975.50591744819 975.50480993586 36.012 2 0.17086311537375476 0.0005449591280653951 0.0018690798676202008 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 263 12606 AAGGVGSIVRV True PC9_epitope_Rep2 984.5716285588 984.57052993586 53.798 2 0.1708592470008728 0.0005449591280653951 0.0018692466274747603 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 72208 14624 MHAETAFESL True PC9_epitope_Rep4 1134.5015599633 1134.50046993586 64.181 2 0.17085790775535895 0.0005449591280653951 0.0018693043638443906 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 134577 20431 VYSFGFERL True PC9_epitope_Rep1 1116.56039516876 1116.55928993586 83.4 2 0.17085610470037707 0.0005449591280653951 0.0018693820983764267 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 85026 11034 QEHPVVLLP True H1975_Epitope_Rep3 1030.5811306133398 1030.58002993586 47.532 2 0.1708530068096639 0.0005449591280653951 0.0018695156642993165 ['nc|ENSG00000116906|O15228-2|GNPAT', 'ENSG00000116906|ENST00000366647|GNPAT'] 134196 9641 VYLPTHTSL True NCI_RA007_Epitope_Rep5 1029.54949613189 1029.54838993586 43.723 2 0.1708524863795889 0.0005449591280653951 0.0018695381036400668 ['ENSG00000007944|ENST00000356840|MYLIP'] 114602 8859 TQDPTVTRL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 38.916 2 0.17084371244433755 0.0005449591280653951 0.0018699164492567146 ['ENSG00000130827|ENST00000369682|PLXNA3'] 45877 8968 ISDSDYQAEY True H1975_Epitope_Rep1 1189.47751296009 1189.47697496793 39.4 1 0.17083564269174478 0.0005449591280653951 0.0018702644970654662 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 71434 16949 LYTEKFEEF True PC9_epitope_Rep4 1204.5652057656796 1204.5641099358602 73.184 2 0.17082391637360822 0.0005449591280653951 0.0018707703677973728 ['ENSG00000084652|ENST00000373610|TXLNA'] 3259 4649 AGFAGDDAPR True NCI_RA007_Epitope_Rep3 975.4410083120698 975.43990993586 25.209 2 0.1708195755429576 0.0005449591280653951 0.001870957664975166 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 37916 10233 GYSFTTTAER True PC9_epitope_Rep3 1131.51965255559 1131.5185499358602 44.312 2 0.1708041735857632 0.0005449591280653951 0.0018716223765381113 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 14410 17164 DTDIVDEAIYY True H1975_Epitope_Rep3 1315.58197802863 1315.5808899358601 71.655 2 0.1708003996220288 0.0005449591280653951 0.0018717852878084602 ['ENSG00000111229|ENST00000228825|ARPC3'] 89472 16798 QYFPKAPEF True PC9_epitope_Rep4 1125.5494961318898 1125.54838993586 72.585 2 0.17079790423325966 0.0005449591280653951 0.0018718930144297004 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 54779 20184 KYNDNFFGL True PC9_epitope_Rep2 1116.5240096600398 1116.52290993586 83.052 2 0.17079427580440226 0.0005449591280653951 0.001872049665772026 ['ENSG00000012963|ENST00000013070|UBR7'] 57656 2758 LEEEPRGPP True H1975_Epitope_Rep2 1022.5032742154598 1022.50216993586 14.637 2 0.17078750699245795 0.0005449591280653951 0.0018723419329568164 ['ENSG00000213015|ENST00000325333|ZNF580'] 114990 19951 TRADLIFTV True PC9_epitope_Rep3 1034.5760452328998 1034.57494993586 81.985 2 0.1707831529547319 0.0005449591280653951 0.0018725299579278856 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 17716 14280 EHNSILQSL True PC9_epitope_Rep6 1039.52982331647 1039.5287299358602 66.82 2 0.1707813311193961 0.0005449591280653951 0.0018726086377574343 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1', 'KLC1|p.G290Afs*11|1|0.15|ENSG00000126214|chr14:103669580-103669580|G/-|frameshift_variant'] 78596 12480 NYSNIRFQF True NCI_RA007_Epitope_Rep3 1187.57235683479 1187.5712499358601 56.315 2 0.1707793605502731 0.0005449591280653951 0.0018726937446954823 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 139929 10659 YQAEHLLQT True PC9_epitope_Rep4 1101.5454733806098 1101.54436993586 48.749 2 0.1707783147962831 0.0005449591280653951 0.001872738911351382 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ADAM8|p.Q214Rfs*17|1|0.52|ENSG00000151651|chr10:133272862-133272862|T/-|frameshift_variant', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 134640 21333 VYSQFITQL True PC9_epitope_Rep1 1097.5757108797297 1097.57517496793 86.888 1 0.17077686440133008 0.0005449591280653951 0.0018728015564640186 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 106230 7937 STELNHLGY True H1975_Epitope_Rep1 1032.48762415132 1032.48652993586 35.479 2 0.1707742922490086 0.0005449591280653951 0.0018729126574094693 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 62711 18841 LLLNNDNLLR True PC9_epitope_Rep5 1196.6877209401998 1196.68662993586 77.489 2 0.17077089277584107 0.0005449591280653951 0.0018730595035753325 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 97652 6518 SEGFDTYR True NCI_RA007_Epitope_Rep2 973.4141248578899 973.41302993586 29.963 2 0.17076677914535857 0.0005449591280653951 0.001873237214414908 ['ENSG00000132646|ENST00000379143|PCNA', 'ENST00000397222.2_1_X:45918520-45918886:-|nuORF'] 142870 17708 YYTKGFALL True PC9_epitope_Rep6 1074.5749826037397 1074.57388993586 80.747 2 0.1707632862111483 0.0005449591280653951 0.0018733881241171572 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 39113 14908 HHYEGAVVIL True PC9_epitope_Rep1 1136.5978433066398 1136.59674993586 62.166 2 0.17076192029145232 0.0005449591280653951 0.0018734471410004928 ['ENSG00000163655|ENST00000496455|GMPS'] 85221 9036 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.746 2 0.1707566847353997 0.0005449591280653951 0.0018736733693339236 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 141684 9896 YTTDRVMTV True PC9_epitope_Rep4 1084.5222954078802 1084.52118993586 45.716 2 0.17075579506496366 0.0005449591280653951 0.001873711814702956 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 7486 9312 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41890993586 40.779 2 0.17074216584071938 0.0005449591280653951 0.0018743008736620968 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 2197 5309 AEMAEEAQQQA True H1975_Epitope_Rep2 1204.50301651528 1204.50190993586 25.472 2 0.17073648454859922 0.0005449591280653951 0.0018745464754416376 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 23733 21958 EYFSYPVSL True PC9_epitope_Rep5 1103.51752729727 1103.51642993586 89.497 2 0.17073481222574793 0.0005449591280653951 0.0018746187759515842 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 140987 9641 YSHFQHLLY True H1975_Epitope_Rep2 1206.5821932425001 1206.58054490379 42.062 3 0.17072523010951846 0.0005449591280653951 0.0018750330989735177 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 84874 5735 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 27.058 1 0.1707180045843336 0.0005449591280653951 0.0018753455854808427 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 77568 4508 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 22.452 2 0.17070568330797745 0.0005449591280653951 0.0018758785711054736 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 21175 7421 ERDISQDSL True PC9_epitope_Rep4 1061.4989171110099 1061.4978299358602 35.893 2 0.1706987451039863 0.0005449591280653951 0.0018761787660443753 ['ENSG00000166233|ENST00000379887|ARIH1'] 76724 16689 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53911496793 69.199 1 0.17069179052353028 0.0005449591280653951 0.0018764797177792786 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 65802 12550 LSDISVVSNY True H1975_Epitope_Rep1 1095.54480467427 1095.54370993586 53.319 2 0.17068565926681506 0.0005449591280653951 0.0018767450811567915 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 141431 6666 YTETEPYHNY True H1975_Epitope_Rep3 1315.5356965425499 1315.5345899358601 30.595 2 0.17067791620909564 0.0005449591280653951 0.0018770802576122375 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 104041 4644 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 22.958 2 0.170674564336411 0.0005449591280653951 0.0018772253698753892 ['ENSG00000130935|ENST00000253247|NOL11'] 64924 9176 LQEEMLQR True PC9_epitope_Rep5 1045.52262976105 1045.5215299358601 40.241 2 0.17067421132980823 0.0005449591280653951 0.00187724065320551 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 137813 5478 YEQNDRLTP True H1975_Epitope_Rep3 1134.53055159246 1134.5294499358602 26.124 2 0.17067303426910826 0.0005449591280653951 0.0018772916146455672 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 77084 17643 NRLFQENSVL True PC9_epitope_Rep5 1218.63568536734 1218.63458993586 72.875 2 0.17066995745113273 0.0005449591280653951 0.001877424833578772 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 90130 8182 REDDLNVSV True H1975_Epitope_Rep2 1045.50400249145 1045.50290993586 36.423 2 0.1706646465813419 0.0005449591280653951 0.0018776548039202783 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9'] 42438 9447 IEDTRYTLP True H1975_Epitope_Rep2 1106.56078909158 1106.5596899358602 41.305 2 0.17065644211585004 0.0005449591280653951 0.0018780101276333002 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 61729 12405 LLAELEQLK True NCI_RA007_Epitope_Rep1 1055.6226610721499 1055.6215699358602 52.227 2 0.17065277569023835 0.0005449591280653951 0.001878168937052968 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 98007 12186 SEQEHFLIV True H1975_Epitope_Rep2 1100.5502244078798 1100.54912993586 51.955 2 0.17064544520533279 0.0005449591280653951 0.0018784864936854159 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 9074 9371 AVIEAEHTL True PC9_epitope_Rep4 981.5131106231701 981.51200993586 43.654 2 0.17064220256129195 0.0005449591280653951 0.0018786269821738566 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'ENST00000436565.2_1_13:77561342-77561690:+|nuORF'] 140939 11563 YSESSQLLY True H1975_Epitope_Rep3 1088.50260550912 1088.5015099358602 49.605 2 0.17062147937633954 0.0005449591280653951 0.001879525068443427 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 108416 12542 SYLNSVQRL True PC9_epitope_Rep6 1078.5771078620598 1078.5760099358602 59.678 2 0.1706124305095948 0.0005449591280653951 0.0018799173563527906 ['nc|ENSG00000136243|O15504-2|NUP42', 'ENSG00000136243|ENST00000258742|NUP42'] 32446 10250 GFVTFDDHD True NCI_RA007_Epitope_Rep4 1051.42468954159 1051.42358993586 46.281 2 0.17060636465311602 0.0005449591280653951 0.0018801803701891924 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 72054 19694 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55707496793 81.977 1 0.17060360736668184 0.0005449591280653951 0.0018802999375270163 ['ENSG00000198712|ENST00000361739|MT-CO2'] 114910 7005 TQSPSVKSL True PC9_epitope_Rep5 945.51311062317 945.51200993586 31.912 2 0.170599481536428 0.0005449591280653951 0.0018804788647910642 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant'] 76378 15552 NQAKYIPEL True PC9_epitope_Rep3 1074.57095985246 1074.5698699358602 64.968 2 0.17058349986940105 0.0005449591280653951 0.0018811721117902667 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 31176 10736 GAYKYIQEL True H1975_Epitope_Rep1 1083.56006081559 1083.5589699358602 46.258 2 0.17057974626505482 0.0005449591280653951 0.0018813349713659609 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 134102 18455 VYKTIMEQF True PC9_epitope_Rep5 1157.57908200801 1157.5779899358602 76.008 2 0.1705780850237263 0.0005449591280653951 0.0018814070530068906 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 77522 10186 NTDHLTTVLY True H1975_Epitope_Rep3 1175.58225281215 1175.5811499358601 44.225 2 0.1705766508996909 0.0005449591280653951 0.0018814692821989098 ['nc|nan|Q96EF9|ZHX1-C8orf76', 'ENSG00000189376|ENST00000276704|C8orf76'] 29299 12841 FVDDEELAY True H1975_Epitope_Rep2 1099.47097102767 1099.46986993586 54.504 2 0.1705748927317688 0.0005449591280653951 0.0018815455750412925 ['ENSG00000167113|ENST00000300452|COQ4', 'nc|ENSG00000167113|Q9Y3A0-2|COQ4', 'ENST00000461102.1_1_9:131094341-131094578:+|nuORF'] 139966 20472 YQDEVFGGF True PC9_epitope_Rep4 1060.4501760134397 1060.44906993586 86.892 2 0.17057086467630264 0.0005449591280653951 0.0018817203776374989 ['ENSG00000145907|ENST00000356245|G3BP1'] 23098 16745 EVIRELAGI True PC9_epitope_Rep4 998.5760452328998 998.57494993586 72.378 2 0.1705693671119124 0.0005449591280653951 0.0018817853704944652 ['ENSG00000066654|ENST00000396083|THUMPD1'] 95358 15549 RVVDLLNQA True PC9_epitope_Rep5 1026.5821932425 1026.58108993586 64.819 2 0.1705680953098211 0.0005449591280653951 0.0018818405672479748 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 45383 5133 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 24.048 2 0.1705604993524117 0.0005449591280653951 0.0018821702687723122 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 74591 21903 NGFPVFATV True PC9_epitope_Rep1 950.48616759934 950.48506993586 89.063 2 0.17055822980270113 0.0005449591280653951 0.0018822687894898505 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 9708 15081 AYGKDFHLI True PC9_epitope_Rep1 1062.5498304850598 1062.5487299358601 62.827 2 0.17055549986826565 0.0005449591280653951 0.0018823873022557989 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'MIER1|p.K332Nfs*25|1|0.17|ENSG00000198160|chr1:66976643-66976643|A/-|frameshift_variant', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 70558 20580 LWAPRPFNL True PC9_epitope_Rep2 1112.61309944796 1112.6120099358602 84.593 2 0.17055273743663488 0.0005449591280653951 0.0018825072333997256 ['ENSG00000174231|ENST00000304992|PRPF8'] 115072 16149 TRDELEWKL True PC9_epitope_Rep1 1188.6138872935999 1188.61278993586 66.931 2 0.17055257488759595 0.0005449591280653951 0.0018825142907146872 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 32147 9216 GEVFKTYNV True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 40.403 2 0.17055099887468145 0.0005449591280653951 0.0018825827170966488 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 34694 8196 GQDVGRYQV True PC9_epitope_Rep1 1020.49885754136 1020.49776993586 36.359 2 0.17054996933929242 0.0005449591280653951 0.0018826274181894577 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 89605 21047 QYPVIIHLI True PC9_epitope_Rep5 1094.64881625034 1094.6477099358601 86.018 2 0.17054516540225317 0.0005449591280653951 0.0018828360129509475 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 132600 20783 VVFEIQGTTV True PC9_epitope_Rep1 1091.58627556343 1091.5851699358602 84.771 2 0.17053481615996158 0.0005449591280653951 0.0018832854724607048 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 107411 20612 SVLNVLHSL True PC9_epitope_Rep1 980.5654805492 980.56438993586 84.101 2 0.17053401953490016 0.0005449591280653951 0.0018833200737141337 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L'] 92593 5123 RM[Oxidation]QKEITAL True NCI_RA007_Epitope_Rep2 1104.59612943492 1104.59502993586 24.55 2 0.17051815497021336 0.0005449591280653951 0.0018840092804482754 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 85901 18823 QHFNGLLEI True PC9_epitope_Rep4 1069.55564414149 1069.5545499358602 80.488 2 0.17051598335123555 0.0005449591280653951 0.0018841036420602726 ['nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 136274 12331 WSDGHLIYY True H1975_Epitope_Rep3 1152.52400966004 1152.52290993586 52.614 2 0.17051556779601865 0.0005449591280653951 0.0018841216993857163 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2'] 57551 7234 LEDRPANLP True H1975_Epitope_Rep2 1023.53490869691 1023.53380993586 32.762 2 0.1705145885075947 0.0005449591280653951 0.0018841642535725822 ['nc|ENSG00000132405|Q9P2M4-2|TBC1D14', 'ENSG00000132405|ENST00000409757|TBC1D14'] 29660 20101 FVLDHEDGLNL True PC9_epitope_Rep2 1270.61936659686 1270.61826993586 82.727 2 0.17050958835552385 0.0005449591280653951 0.0018843815461290676 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 77376 6561 NSEPEEVIPSR True H1975_Epitope_Rep1 1255.6044448087098 1255.60334993586 30.294 2 0.1705034627193869 0.0005449591280653951 0.0018846477832328795 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000487404.5_1_1:33241584-33248146:-|nuORF', 'ENST00000469100.5_1_1:33241584-33246798:-|nuORF'] 25532 10834 FEIGGTIHP True H1975_Epitope_Rep2 969.49198125577 969.49088993586 46.701 2 0.17050155833201486 0.0005449591280653951 0.0018847305608484704 ['ENSG00000138678|ENST00000264409|GPAT3'] 48365 18899 IYTFPHSAF True PC9_epitope_Rep2 1081.5232813840498 1081.52218993586 78.059 2 0.17049960147024582 0.0005449591280653951 0.001884815623147266 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 93721 12717 RQYFQEIGL True NCI_RA007_Epitope_Rep5 1152.5927579262 1152.5916699358602 55.582 2 0.1704968092729145 0.0005449591280653951 0.001884937003073783 ['ENSG00000110328|ENST00000227756|GALNT18'] 140038 18148 YQFGEIRTI True PC9_epitope_Rep2 1125.5818588893299 1125.5807699358602 75.108 2 0.17049611903474104 0.0005449591280653951 0.0018849670097012031 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 73594 11752 MVVQDGIVKA True PC9_epitope_Rep2 1058.57941636118 1058.57830993586 50.536 2 0.17049437208997573 0.0005449591280653951 0.00188504295652177 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 68430 4851 LTEVNKAGTQY True H1975_Epitope_Rep2 1222.61936659686 1222.61826993586 23.747 2 0.1704928627221233 0.0005449591280653951 0.0018851085773693515 ['ENSG00000170542|ENST00000380698|SERPINB9'] 115095 13513 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61278993586 63.699 2 0.17049123794205734 0.0005449591280653951 0.0018851792183998404 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 64731 16572 LPWQGLKAA True PC9_epitope_Rep3 982.5600012459398 982.55890993586 68.883 2 0.17047616678287783 0.0005449591280653951 0.0018858345977600596 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 67402 5438 LSSPATLNSR True NCI_RA007_Epitope_Rep5 1044.5563724174801 1044.55526993586 27.606 2 0.17045821172241285 0.0005449591280653951 0.0018866156830485241 ['CON__P00761'] 100268 15052 SIYNGDMEKI True PC9_epitope_Rep1 1168.5434247752798 1168.5423299358602 62.715 2 0.17045807057756576 0.0005449591280653951 0.0018866218244470957 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 93369 8603 RPYQPLPEA True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 42.901 2 0.1704569453826358 0.0005449591280653951 0.0018866707838787516 ['ENSG00000165476|ENST00000373758|REEP3'] 9499 5811 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 27.747 2 0.17045653606943828 0.0005449591280653951 0.0018866885942116771 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 40046 10835 HPTEDLVVSA True PC9_epitope_Rep5 1066.5294889632999 1066.52838993586 46.664 2 0.17045301252003964 0.0005449591280653951 0.001886841920407481 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 4920 22804 ALFVRLLALA True PC9_epitope_Rep5 1085.6961007959299 1085.69500993586 92.706 2 0.17045157991462645 0.0005449591280653951 0.0018869042633672768 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF', 'TGFBI|p.Y82Sfs*47|1|0.21|ENSG00000120708|chr5:136044069-136044069|A/-|frameshift_variant'] 14925 16833 DYDSVFHHL True PC9_epitope_Rep5 1131.4985231881901 1131.49687490379 69.757 3 0.17043780945182146 0.0005449591280653951 0.0018875036203147573 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'EPC1|p.S472L|1|0.26|ENSG00000120616|chr10:32285027-32285027|G/A|missense_variant', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 96218 15282 RYPTSIASL True PC9_epitope_Rep5 1006.5447451046199 1006.54364993586 63.791 2 0.17043161043666682 0.0005449591280653951 0.0018877734935172578 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 22226 15188 ESYSIYVYK True PC9_epitope_Rep3 1150.55464108198 1150.55354993586 63.566 2 0.17043038937660404 0.0005449591280653951 0.0018878266567363604 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 38489 7177 HEQLRAVIV True H1975_Epitope_Rep3 1063.61382772395 1063.6127299358602 32.581 2 0.17042638355055037 0.0005449591280653951 0.0018880010752253705 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 26940 9813 FLDQNLQKY True H1975_Epitope_Rep2 1167.59242357303 1167.5913299358601 42.729 2 0.17042391659976378 0.0005449591280653951 0.0018881084972543498 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 70857 18873 LYDPVISKL True PC9_epitope_Rep5 1046.6011973515801 1046.60010993586 77.614 2 0.17041770354688607 0.0005449591280653951 0.0018883790683542551 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 31667 10287 GEFSITYKP True H1975_Epitope_Rep2 1040.5178616504397 1040.51676993586 44.576 2 0.1704120979693439 0.0005449591280653951 0.0018886232179108119 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 40929 5240 HSSNVKVVL True NCI_RA007_Epitope_Rep4 981.5607295219299 981.55962993586 26.694 2 0.17039932343503325 0.0005449591280653951 0.0018891797276232786 ['ENSG00000055483|ENST00000449938|USP36'] 11764 13011 DHDGNIVEL True PC9_epitope_Rep6 1010.46688870674 1010.46578993586 61.628 2 0.17039839330721432 0.0005449591280653951 0.0018892202541114264 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 29406 20593 FVDPVLNQL True PC9_epitope_Rep4 1043.56514619603 1043.56404993586 87.363 2 0.17039558686372505 0.0005449591280653951 0.0018893425385971669 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 37592 13097 GVVPTIQKV True PC9_epitope_Rep3 939.5753169569098 939.57420993586 55.402 2 0.17038787441900452 0.0005449591280653951 0.001889678631877802 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 68046 13790 LTDLPGQELY True H1975_Epitope_Rep2 1147.57610480255 1147.5750099358602 58.188 2 0.17038513480924602 0.0005449591280653951 0.0018897980331186498 ['ENSG00000083817|ENST00000196489|ZNF416'] 61104 19318 LIIDENGVHEL True PC9_epitope_Rep1 1250.65066672514 1250.6495699358602 79.111 2 0.17038091721422563 0.0005449591280653951 0.0018899818645932282 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 2190 8462 AELWKNPTA True H1975_Epitope_Rep3 1028.52909504048 1028.5279899358602 37.533 2 0.1703768576359385 0.0005449591280653951 0.0018901588255220213 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C'] 118031 21730 TYEKFFGLL True PC9_epitope_Rep5 1116.5855472874398 1116.5844499358602 88.617 2 0.17037295051917076 0.0005449591280653951 0.001890329156161187 ['ENSG00000163510|ENST00000410053|CWC22'] 125285 13977 VILPTVHEV True PC9_epitope_Rep6 1005.5858816406101 1005.58478993586 65.621 2 0.17035654937042877 0.0005449591280653951 0.001891044331301882 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 100499 22338 SLAQYLINV True PC9_epitope_Rep5 1019.5651461960299 1019.56404993586 90.934 2 0.1703551248721221 0.0005449591280653951 0.0018911064595908635 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 4850 15307 ALELDSNLYR True PC9_epitope_Rep4 1192.60880191316 1192.6077099358602 66.812 2 0.17035406508469167 0.0005449591280653951 0.0018911526826482057 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 106107 11882 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 50.704 2 0.17035117818780357 0.0005449591280653951 0.0018912786015568028 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 131039 5012 VTDRSDARLQY True H1975_Epitope_Rep3 1322.6578773638998 1322.6567899358602 24.404 2 0.1703385330621574 0.0005449591280653951 0.001891830247783758 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 24703 21743 FAMEIDPSL True PC9_epitope_Rep1 1021.4790336135699 1021.4784749679301 88.467 1 0.1703365210605207 0.0005449591280653951 0.0018919180366157298 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 138791 22331 YIVDLLTHL True PC9_epitope_Rep5 1085.61209638845 1085.61098993586 90.905 2 0.17033538570203555 0.0005449591280653951 0.001891967577039921 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 25640 12568 FEPPETPVV True H1975_Epitope_Rep2 1013.50696261357 1013.50586993586 53.437 2 0.170322700853941 0.0005449591280653951 0.0018925211581079066 ['ENSG00000184371|ENST00000329608|CSF1', 'nc|ENSG00000184371|P09603-2|CSF1'] 76685 20605 NQSELAVLL True PC9_epitope_Rep4 985.5444107514498 985.54330993586 87.411 2 0.17031949012511124 0.0005449591280653951 0.0018926613036310807 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 78288 20221 NYIKDLNIL True PC9_epitope_Rep5 1104.61791004488 1104.6168099358601 82.827 2 0.17030881081071808 0.0005449591280653951 0.0018931275211300834 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 121631 19624 VFHPSQDLVF True PC9_epitope_Rep5 1187.5975089534697 1187.59640993586 80.536 2 0.17029985130455613 0.0005449591280653951 0.0018935187470947214 ['ENSG00000110107|ENST00000227524|PRPF19'] 104302 19149 SQINKFLYL True PC9_epitope_Rep4 1124.62299542532 1124.62188993586 81.753 2 0.17029527787890897 0.0005449591280653951 0.001893718481566843 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 6907 13827 AQIGSYVHV True PC9_epitope_Rep1 972.50288029264 972.50178993586 58.028 2 0.17029093038880908 0.0005449591280653951 0.0018939083683349159 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 24479 17251 FAEGFVRAL True PC9_epitope_Rep6 1008.5392658013598 1008.53816993586 78.955 2 0.17029037881112608 0.0005449591280653951 0.0018939324611381423 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 93353 11632 RPYEPINSI True PC9_epitope_Rep4 1087.56620882519 1087.5651099358602 52.499 2 0.1702824351956147 0.0005449591280653951 0.0018942794706887926 ['ENSG00000115207|ENST00000264720|GTF3C2'] 24614 21714 FAIPLIEKL True PC9_epitope_Rep3 1042.64266824074 1042.6415699358602 88.816 2 0.17026324805056375 0.0005449591280653951 0.0018951179059052013 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 2458 10148 AEQLIQEAC True H1975_Epitope_Rep2 1003.4644461785899 1003.46334993586 44.033 2 0.17026319203179333 0.0005449591280653951 0.0018951203543433502 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 6875 19085 AQIDHYLGL True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 78.201 2 0.17026142632471153 0.0005449591280653951 0.0018951975305364784 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 108777 12713 SYSSTFHSL True PC9_epitope_Rep5 1027.46107505031 1027.45996993586 53.906 2 0.17026000608951627 0.0005449591280653951 0.0018952596089953982 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 8691 8305 AVALPLQTK True NCI_RA007_Epitope_Rep4 939.57531695691 939.57420993586 38.757 2 0.1702596081813746 0.0005449591280653951 0.0018952770019190854 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 75281 5838 NIIPASTGAAK True H1975_Epitope_Rep3 1041.58185888933 1041.5807699358602 27.47 2 0.1702425299462947 0.0005449591280653951 0.0018960236575056128 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000515281.1_1_11:88141588-88141981:-|nuORF', 'ENSG00000105679|ENST00000222286|GAPDHS'] 29337 19961 FVDEYDPTI True PC9_epitope_Rep5 1097.49170647225 1097.4906099358602 81.833 2 0.17024137971562459 0.0005449591280653951 0.0018960739558400845 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 97702 6651 SEIDPNPDQSA True H1975_Epitope_Rep2 1171.49931103383 1171.4982099358601 30.491 2 0.17022825001286393 0.0005449591280653951 0.0018966481980405047 ['ENSG00000113369|ENST00000265138|ARRDC3'] 140403 12875 YRFETVQKL True PC9_epitope_Rep1 1182.6397081186199 1182.63805490379 54.398 3 0.17022741870237015 0.0005449591280653951 0.0018966845621889636 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 141249 12814 YTDFPCQY True H1975_Epitope_Rep2 1035.40078329287 1035.40027496793 54.397 1 0.1702227975282822 0.0005449591280653951 0.001896886719665679 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 74487 8002 NFEDVAFDEKK True H1975_Epitope_Rep1 1340.6248459001197 1340.62321490379 35.723 3 0.17022136187431883 0.0005449591280653951 0.001896949528046822 ['ENSG00000185624|ENST00000331483|P4HB'] 139951 7607 YQAVTATLEEK True NCI_RA007_Epitope_Rep5 1251.63468230783 1251.63358993586 35.956 2 0.1702202083350869 0.0005449591280653951 0.0018969999957067494 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 82223 6372 PPAPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 31.113 2 0.17021766515468692 0.0005449591280653951 0.0018971112652968966 ['nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'DGKK|p.A42P|1|0.95|ENSG00000274588|chrX:50470555-50470555|C/G|missense_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'BOD1L1|p.L1167Ffs*9|1|0.15|ENSG00000038219|chr4:13603380-13603399|AATCTGCTGTGCAAGTTCTC/-|frameshift_variant', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000197483|ENST00000598519|ZNF628', 'nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'ENST00000413725.5_1_11:64533292-64535069:-|nuORF', 'ENSG00000038219|ENST00000040738|BOD1L1', 'nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 40504 13602 HRDSGILGL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 57.344 2 0.1702155917828651 0.0005449591280653951 0.0018972019845869999 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 141678 11267 YTTDRVMTV True PC9_epitope_Rep1 1084.5222954078802 1084.52118993586 48.219 2 0.1702107236016632 0.0005449591280653951 0.0018974150063458767 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 92358 13533 RLPDIPLRQV True PC9_epitope_Rep6 1205.72444080209 1205.72278490379 63.786 3 0.17020816049740067 0.0005449591280653951 0.0018975271722180061 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 87205 14939 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49562993586 62.285 2 0.170201133299083 0.0005449591280653951 0.0018978347285878395 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 104249 11728 SQIDPSSIERA True PC9_epitope_Rep1 1201.5938801250102 1201.59278993586 49.986 2 0.17018434375310504 0.0005449591280653951 0.0018985697513712535 ['ENSG00000100393|ENST00000263253|EP300'] 54098 16230 KVLNELTQL True PC9_epitope_Rep2 1056.6179100448799 1056.6168099358601 67.674 2 0.17018306075962117 0.0005449591280653951 0.0018986259307389461 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 35849 9278 GTLSSWNLK True NCI_RA007_Epitope_Rep3 1004.52909504048 1004.52798993586 43.604 2 0.1701729960192972 0.0005449591280653951 0.0018990667005359795 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 61347 6797 LISNASDALDK True H1975_Epitope_Rep1 1145.5928174958499 1145.59172993586 31.187 2 0.17016804635147179 0.0005449591280653951 0.0018992835011631141 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 140793 8145 YSDKYFDEHY True H1975_Epitope_Rep3 1365.55134660669 1365.5502499358602 36.307 2 0.1701675792510255 0.0005449591280653951 0.001899303961929736 ['ENSG00000123975|ENST00000314355|CKS2'] 28193 12904 FREDQIYRI True PC9_epitope_Rep4 1238.64077074778 1238.6391149037902 57.515 3 0.1701545983689474 0.0005449591280653951 0.0018998726618990307 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 106326 13888 STFVLDEFKR True PC9_epitope_Rep6 1240.6451874218799 1240.6435349037902 65.256 3 0.170149974415257 0.0005449591280653951 0.0019000752811383966 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 4465 13533 AIVDKVPSV True PC9_epitope_Rep3 926.54368247546 926.54258993586 57.108 2 0.17014878197194683 0.0005449591280653951 0.0019001275368887257 ['ENSG00000181789|ENST00000314797|COPG1'] 35178 5445 GQYGNPLNK True NCI_RA007_Epitope_Rep5 989.4930438849299 989.49194993586 27.632 2 0.1701463342828037 0.0005449591280653951 0.0019002348050525073 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 30374 8563 GADPRAISL True H1975_Epitope_Rep3 898.4872302284999 898.48612993586 37.926 2 0.17013874849059138 0.0005449591280653951 0.0019005672852614663 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 131031 2749 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 14.605 3 0.17013752896149717 0.0005449591280653951 0.001900620741837601 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 9612 18472 AYALLLQHL True PC9_epitope_Rep6 1040.60186605792 1040.6007699358602 83.693 2 0.1701368124955201 0.0005449591280653951 0.0019006521479546551 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF'] 54375 10883 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.53333490379 49.626 3 0.17013034147644196 0.0005449591280653951 0.0019009358270709537 ['ENSG00000123975|ENST00000314355|CKS2'] 71924 14254 MEQLRLLVC True H1975_Epitope_Rep2 1103.58312184263 1103.5820299358602 59.978 2 0.17012817656395315 0.0005449591280653951 0.001901030742824332 ['ENSG00000182195|ENST00000370526|LDOC1', 'ENST00000460721.1_1_X:140270590-140271194:-|nuORF'] 141373 7228 YTEEDAASY True H1975_Epitope_Rep3 1047.40328539067 1047.4027749679299 32.774 1 0.17012664436738778 0.0005449591280653951 0.001901097921426288 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 115715 8721 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 40.337 2 0.17012316655422827 0.0005449591280653951 0.001901250413694859 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 21190 10896 ERDMSNVSL True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 46.796 2 0.1701204488834012 0.0005449591280653951 0.0019013695843899548 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 106490 10987 STLDIVLANK True NCI_RA007_Epitope_Rep4 1072.61282466444 1072.61172993586 49.13 2 0.17011923910552076 0.0005449591280653951 0.0019014226359228689 ['ENSG00000167325|ENST00000300738|RRM1'] 140369 10944 YRDPYTGQSV True PC9_epitope_Rep2 1184.5462016566 1184.5451099358602 47.416 2 0.1701165554654172 0.0005449591280653951 0.0019015403249785486 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 68440 5189 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 25.032 2 0.1701112455268034 0.0005449591280653951 0.0019017732098921792 ['ENSG00000124570|ENST00000380539|SERPINB6'] 68334 16104 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.5222499358601 67.402 2 0.17010846397406668 0.0005449591280653951 0.001901895215472272 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 99191 18451 SHLDYDITL True PC9_epitope_Rep2 1075.5185899264302 1075.51748993586 76.303 2 0.1701083068377874 0.0005449591280653951 0.001901902108080352 ['ENSG00000163960|ENST00000296328|UBXN7'] 28940 11870 FTDPRAYLKY True H1975_Epitope_Rep2 1272.6502728023197 1272.64916993586 50.736 2 0.17009988326159728 0.0005449591280653951 0.0019022716354581979 ['ENSG00000026652|ENST00000320285|AGPAT4'] 111429 14502 THSNTIVVSL True PC9_epitope_Rep5 1069.57677350889 1069.57566993586 60.782 2 0.17009493336390474 0.0005449591280653951 0.0019024888122128928 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 104257 9924 SQIDPSSIERA True PC9_epitope_Rep6 1201.5938801250102 1201.59278993586 48.689 2 0.17009167592804786 0.0005449591280653951 0.001902631745739716 ['ENSG00000100393|ENST00000263253|EP300'] 90669 5486 REQEITAVQA True H1975_Epitope_Rep1 1143.58840082175 1143.58730993586 26.163 2 0.170070368032772 0.0005449591280653951 0.0019035669831572453 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 7149 5544 AQYEDIANR True NCI_RA007_Epitope_Rep5 1078.5043368446197 1078.5032299358602 28.012 2 0.1700699580375229 0.0005449591280653951 0.0019035849830100057 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 8083 8099 ATDTASGTGLY True H1975_Epitope_Rep3 1055.4771190372699 1055.47657496793 36.127 1 0.1700686927220347 0.0005449591280653951 0.0019036405347090171 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 74004 13424 NDEELNKLLGK True PC9_epitope_Rep2 1271.6721304457099 1271.67049490379 56.919 3 0.17006742187018117 0.0005449591280653951 0.0019036963311059982 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 108737 19080 SYRQVAFDF True PC9_epitope_Rep5 1131.5349086969097 1131.53380993586 78.421 2 0.1700628963191377 0.0005449591280653951 0.0019038950374524043 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 21350 17967 ERFNVPVSL True PC9_epitope_Rep4 1059.5712942056298 1059.57018993586 77.164 2 0.1700603253465212 0.0005449591280653951 0.0019040079320803472 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 87870 16198 QRIDEFEAL True PC9_epitope_Rep4 1119.5560380643099 1119.5549499358601 70.249 2 0.1700574973233174 0.0005449591280653951 0.0019041321218565511 ['ENSG00000092820|ENST00000367075|EZR'] 89497 18443 QYILFPLRF True NCI_RA007_Epitope_Rep5 1195.67536535135 1195.6742699358601 77.764 2 0.17004350612975427 0.0005449591280653951 0.0019047466501896171 ['ENSG00000101407|ENST00000373447|TTI1'] 40856 12879 HSEFTTLLY True H1975_Epitope_Rep2 1109.53932537101 1109.53822993586 54.651 2 0.17004317716198583 0.0005449591280653951 0.0019047611016667573 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-6|GTF2IRD2'] 95733 19270 RYGNTPFLF True PC9_epitope_Rep4 1113.56072952193 1113.5596299358601 82.225 2 0.17004270243781933 0.0005449591280653951 0.0019047819563817433 ['ENSG00000188419|ENST00000357749|CHM'] 19237 10723 ELISNSSDAL True H1975_Epitope_Rep1 1047.50841916555 1047.50732993586 46.207 2 0.17004105021718124 0.0005449591280653951 0.0019048545405019985 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P'] 27802 19191 FQDDNNLYL True PC9_epitope_Rep4 1140.50875351872 1140.5076499358602 81.917 2 0.1700395535401658 0.0005449591280653951 0.001904920293784846 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 17247 12818 EHAFAVQQL True PC9_epitope_Rep4 1041.5243440132099 1041.5232499358601 57.167 2 0.1700353763850694 0.0005449591280653951 0.0019051038201146056 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 59737 14928 LGDLYEEEMR True PC9_epitope_Rep1 1253.5598031154097 1253.5587099358602 62.243 2 0.17002769504644463 0.0005449591280653951 0.001905441351454792 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 68849 16948 LTMEVIRQV True PC9_epitope_Rep5 1087.60596546219 1087.60486993586 70.208 2 0.17002522023847888 0.0005449591280653951 0.0019055501115507266 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 17348 21535 EHDAFIFAL True PC9_epitope_Rep2 1061.51819600361 1061.5170899358602 88.301 2 0.1700248982951962 0.0005449591280653951 0.0019055642604109766 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 11288 20013 DEHLQLISL True PC9_epitope_Rep4 1066.56587447202 1066.56476993586 85.114 2 0.1700224228741223 0.0005449591280653951 0.0019056730544720314 ['ENSG00000163918|ENST00000296273|RFC4'] 95089 20221 RVADILTQL True PC9_epitope_Rep1 1027.60259433391 1027.6014899358602 82.609 2 0.17001844669080565 0.0005449591280653951 0.0019058478196192774 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 108370 17042 SYLENVDHF True PC9_epitope_Rep2 1122.49818883502 1122.49708993586 70.803 2 0.17001823592824916 0.0005449591280653951 0.0019058570837113683 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 62723 23655 LLLPDYYLVTV True PC9_epitope_Rep3 1307.73769082439 1307.7365899358601 96.275 2 0.17001297397421125 0.0005449591280653951 0.0019060883881015327 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 134608 18326 VYSKDNPNLLF True PC9_epitope_Rep5 1308.67140216972 1308.6703099358601 75.505 2 0.17000588053593707 0.0005449591280653951 0.001906400245120121 ['ENSG00000174231|ENST00000304992|PRPF8'] 41977 9152 IDEPLEGSEDR True PC9_epitope_Rep1 1258.56772494682 1258.5666299358602 40.054 2 0.1700050371132018 0.0005449591280653951 0.0019064373288831425 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 26326 9560 FHNTEVEAM True PC9_epitope_Rep5 1076.45969515132 1076.4585899358601 41.731 2 0.17000357795672388 0.0005449591280653951 0.0019065014870427144 ['ENSG00000198730|ENST00000361367|CTR9'] 133815 19165 VYFVAPAKF True PC9_epitope_Rep5 1040.5695033004797 1040.56840993586 78.755 2 0.17000337340899646 0.0005449591280653951 0.0019065104810456306 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 115463 10411 TRMSTVSEL True PC9_epitope_Rep5 1022.5066453437399 1022.5055499358599 45.031 2 0.1700003421740555 0.0005449591280653951 0.001906643770004507 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 105185 12685 SRGDFVVEY True PC9_epitope_Rep6 1070.50327421546 1070.5021699358601 60.268 2 0.16999158624108426 0.0005449591280653951 0.0019070288367923243 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 13393 11355 DLYLENPEIK True H1975_Epitope_Rep3 1232.6288686514001 1232.6277699358602 48.788 2 0.169988649914123 0.0005449591280653951 0.0019071579874512864 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 48052 23289 IYLTFPVAM True PC9_epitope_Rep1 1053.55689001145 1053.55578993586 94.369 2 0.16998096662865442 0.0005449591280653951 0.0019074959685315349 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 105297 14182 SRMDGEGQLTL True PC9_epitope_Rep5 1205.5710365054497 1205.56992993586 59.559 2 0.16997799476785072 0.0005449591280653951 0.0019076267141873826 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 65022 18303 LQIEDFEARIA True PC9_epitope_Rep6 1303.67721582615 1303.67610993586 83.046 2 0.16997445553961318 0.0005449591280653951 0.0019077824326100316 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 126823 19417 VLPSVLNKF True PC9_epitope_Rep5 1015.60661708519 1015.60552993586 79.736 2 0.1699721842381679 0.0005449591280653951 0.00190788237168251 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 8039 3981 ATDPDDTHAY True H1975_Epitope_Rep3 1104.43598250128 1104.4348899358602 20.439 2 0.16997017745071652 0.0005449591280653951 0.0019079706762866204 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 141622 12623 YTSDHFETI True PC9_epitope_Rep1 1111.4822044177101 1111.48110993586 53.424 2 0.16996781663262833 0.0005449591280653951 0.001908074564523932 ['ENSG00000136628|ENST00000366923|EPRS1'] 120893 5279 VENIQRVAA True NCI_RA007_Epitope_Rep4 998.5508931142198 998.54978993586 26.857 2 0.16996147579257206 0.0005449591280653951 0.001908353622377303 ['ENSG00000173801|ENST00000393931|JUP'] 1263 2747 AEDIDKGEVSA True H1975_Epitope_Rep2 1132.52479750568 1132.52370993586 14.601 2 0.1699589337530234 0.0005449591280653951 0.0019084655079934561 ['ENSG00000167658|ENST00000309311|EEF2'] 96233 12793 RYQDAIRVF True PC9_epitope_Rep4 1166.6196413803798 1166.61799490379 57.071 3 0.1699466576618493 0.0005449591280653951 0.001909005921634164 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 11765 11743 DHDIPQQL True PC9_epitope_Rep1 964.46140940348 964.46030993586 50.043 2 0.16994336435317162 0.0005449591280653951 0.0019091509245179438 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 39109 8247 HHYEGAVVI True PC9_epitope_Rep2 1023.5137793295098 1023.5126899358601 37.079 2 0.16992572742216713 0.0005449591280653951 0.0019099276581015158 ['ENSG00000163655|ENST00000496455|GMPS', 'GMPS|p.G20R|1|0.13|ENSG00000163655|chr3:155893548-155893548|G/C|missense_variant'] 11690 7092 DGVVEITGK True NCI_RA007_Epitope_Rep2 916.48656152216 916.48546993586 32.209 2 0.16991899127446666 0.0005449591280653951 0.0019102244026696323 ['ENSG00000106211|ENST00000248553|HSPB1'] 29693 22830 FVLPELPSV True PC9_epitope_Rep5 999.56408356687 999.56298993586 92.811 2 0.16991488924644507 0.0005449591280653951 0.0019104051301108715 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 17624 14251 EHIPESPYL True PC9_epitope_Rep4 1083.52367530687 1083.52256993586 62.721 2 0.16991400531974407 0.0005449591280653951 0.0019104440764561752 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'FLNB|p.P2279L|1|0.08|ENSG00000136068|chr3:58156023-58156023|C/T|missense_variant'] 6651 19255 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 79.105 2 0.1699124836177849 0.0005449591280653951 0.0019105111254259773 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 96515 6288 SADPDNLKY True H1975_Epitope_Rep3 1021.4716397340101 1021.47054993586 29.192 2 0.1699104030879629 0.0005449591280653951 0.0019106028011824931 ['ENSG00000157106|ENST00000446231|SMG1', 'SMG1|p.S34T|1|0.44|ENSG00000157106|chr16:18896948-18896948|C/G|missense_variant'] 137648 12413 YEIDKTLGI True H1975_Epitope_Rep2 1050.55972646242 1050.5586299358602 52.832 2 0.1699063765797464 0.0005449591280653951 0.0019107802363675863 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 134820 15685 VYTYIQSRF True PC9_epitope_Rep2 1175.5975089534697 1175.59640993586 65.608 2 0.16989803906807377 0.0005449591280653951 0.0019111476959310072 ['DYRK2|p.A390*|1|0.05|ENSG00000127334|chr12:67658074-67658075|-/TA|frameshift_variant', 'DYRK2|p.P391Efs*19|1|0.04|ENSG00000127334|chr12:67658076-67658077|-/CGAGGTTTGTAGAGGT|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 66125 9442 LSELKPMSY True H1975_Epitope_Rep2 1066.53688284286 1066.53578993586 41.286 2 0.16988835149716808 0.0005449591280653951 0.001911574745513555 ['TMTC3|p.K629Qfs*3|1|0.1|ENSG00000139324|chr12:88192781-88192782|-/C|frameshift_variant', 'ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 88919 20179 QVFPGLLERV True PC9_epitope_Rep2 1156.6604435631998 1156.65934993586 83.033 2 0.16987736526704422 0.0005449591280653951 0.0019120591583879742 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 71267 19232 LYPQFM[Oxidation]FHL True PC9_epitope_Rep6 1210.5845021220598 1210.5834099358601 86.628 2 0.16987708936143608 0.0005449591280653951 0.0019120713253999784 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 96967 10460 SAYDGKDYIA True PC9_epitope_Rep5 1101.49785448185 1101.4967499358602 45.221 2 0.1698696203138058 0.0005449591280653951 0.001912400728316923 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 28262 19596 FRMDIEQSL True PC9_epitope_Rep5 1137.54884450889 1137.54774993586 80.428 2 0.16986838095988901 0.0005449591280653951 0.001912455392288832 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 7474 4560 ASAYSIAQK True NCI_RA007_Epitope_Rep4 937.4868958753299 937.48578993586 23.942 2 0.16986681685921984 0.0005449591280653951 0.0019125243820415385 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1'] 55041 8128 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 37.949 2 0.16985944041948614 0.0005449591280653951 0.0019128497774932275 ['ENSG00000143546|ENST00000368733|S100A8'] 90258 6251 REEEYVAPP True H1975_Epitope_Rep3 1088.5138388991597 1088.51274993586 29.056 2 0.16984025076586212 0.0005449591280653951 0.001913696546426664 ['nc|ENSG00000056972|O43734-4|TRAF3IP2', 'nc|ENSG00000056972|O43734-3|TRAF3IP2', 'nc|ENSG00000056972|O43734-5|TRAF3IP2', 'ENSG00000056972|ENST00000368761|TRAF3IP2', 'nc|ENSG00000056972|O43734|TRAF3IP2'] 76614 18709 NQPGVLIQV True PC9_epitope_Rep4 966.5498304850599 966.54872993586 80.043 2 0.16983944772778348 0.0005449591280653951 0.0019137319897209303 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 38378 5840 HEKQVYDIAA True H1975_Epitope_Rep3 1172.5825871653199 1172.5814899358602 27.478 2 0.1698345434887976 0.0005449591280653951 0.0019139484599419465 ['ENSG00000018510|ENST00000264167|AGPS'] 136905 15832 YAFNMKATV True PC9_epitope_Rep1 1043.5110024481899 1043.5099099358602 65.713 2 0.16981328345466631 0.0005449591280653951 0.0019148871486220664 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 106165 7243 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4548899358601 32.832 2 0.1698079400998182 0.0005449591280653951 0.0019151231447726601 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 26929 15119 FLDPASAGIGY True H1975_Epitope_Rep2 1109.53932537101 1109.53822993586 63.309 2 0.16980681697572528 0.0005449591280653951 0.001915172752695566 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 17781 16921 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.5176449679301 73.074 1 0.16980438272586107 0.0005449591280653951 0.0019152802769096062 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 34124 21246 GMPDFLEKL True PC9_epitope_Rep3 1048.52631815916 1048.5252299358601 87.016 2 0.16980385486378236 0.0005449591280653951 0.0019153035941111283 ['ENSG00000084090|ENST00000337288|STARD7'] 45127 20974 IPMELVNEV True PC9_epitope_Rep1 1042.53688284286 1042.53578993586 85.502 2 0.1698022015365762 0.0005449591280653951 0.0019153766282146078 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A'] 78656 13696 NYVEKGFQI True PC9_epitope_Rep6 1096.5553097883198 1096.5542099358602 64.468 2 0.1697950393313581 0.0005449591280653951 0.0019156930437637732 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 17889 8278 EHYNQPTSL True PC9_epitope_Rep5 1087.49343780775 1087.4923499358601 36.78 2 0.16979053654988513 0.0005449591280653951 0.0019158919967070588 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 50005 11799 KIYEGQVEV True PC9_epitope_Rep3 1063.55497543515 1063.5538699358601 50.4 2 0.16978471436633674 0.0005449591280653951 0.0019161492773538847 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 25438 8747 FEDVVNQSSPK True PC9_epitope_Rep5 1248.59863115228 1248.5975299358602 38.587 2 0.1697785284636175 0.0005449591280653951 0.001916422668516951 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 20527 7407 EPPVIQNPEYK True H1975_Epitope_Rep1 1312.66631678928 1312.66520993586 33.494 2 0.1697728064890517 0.0005449591280653951 0.001916675590726966 ['ENSG00000179218|ENST00000316448|CALR'] 49116 9766 KEIQETWTV True H1975_Epitope_Rep2 1132.57643915572 1132.57534993586 42.551 2 0.16977044279188835 0.0005449591280653951 0.0019167800804042302 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 53212 21961 KQFDDVLIYL True PC9_epitope_Rep5 1252.6703395405598 1252.66924993586 89.508 2 0.1697676708754 0.0005449591280653951 0.0019169026230985865 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26'] 115719 8245 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 38.393 2 0.1697667825280757 0.0005449591280653951 0.0019169418973955406 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 57425 14401 LEATINELV True H1975_Epitope_Rep3 1000.5440763982799 1000.54296993586 60.747 2 0.16976633370100497 0.0005449591280653951 0.0019169617405797182 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 53216 13063 KQFEGTVEI True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 55.115 2 0.16975910378692152 0.0005449591280653951 0.0019172814120859386 ['ENSG00000139618|ENST00000380152|BRCA2'] 26355 9862 FHSGDDSQVL True PC9_epitope_Rep5 1103.48835242731 1103.48724993586 42.904 2 0.16975244083571467 0.0005449591280653951 0.0019175760624802803 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 140804 8715 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.4803699358602 38.523 2 0.16975174260692144 0.0005449591280653951 0.0019176069423192325 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 107047 11651 SVFVETFVQK True NCI_RA007_Epitope_Rep4 1182.6284747285797 1182.62736993586 51.772 2 0.16974968719539515 0.0005449591280653951 0.0019176978477556082 ['nc|ENSG00000170786|Q8N3Y7-2|SDR16C5', 'ENSG00000170786|ENST00000303749|SDR16C5'] 84155 19934 PYFNAPVYL True PC9_epitope_Rep6 1082.5436824754597 1082.5425899358602 89.335 2 0.16974513734871735 0.0005449591280653951 0.0019178990908202756 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 95129 18999 RVFIGNLNTL True PC9_epitope_Rep2 1145.65569253593 1145.65458993586 78.446 2 0.1697441999508116 0.0005449591280653951 0.0019179405552436392 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 43430 8618 IGGIGTVPVGR True H1975_Epitope_Rep3 1024.6029286870798 1024.60182993586 38.143 2 0.1697315239467682 0.0005449591280653951 0.0019185013477792396 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 23857 17787 EYIPKWEQF True PC9_epitope_Rep6 1238.5971746003 1238.5960699358602 81.052 2 0.16972961283975743 0.0005449591280653951 0.0019185859103038145 ['ENSG00000114405|ENST00000462069|C3orf14'] 74876 2613 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 14.709 2 0.16971940443545316 0.0005449591280653951 0.0019190376741950157 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 138159 18380 YGLPVVVKL True PC9_epitope_Rep6 986.6164534929 986.61534993586 83.343 2 0.16971060303337074 0.0005449591280653951 0.0019194272578725716 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 76053 13631 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 57.57 2 0.1697091578884034 0.0005449591280653951 0.0019194912330707278 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 29480 12613 FVEWIPNNVK True NCI_RA007_Epitope_Rep2 1244.65535818276 1244.6542699358602 53.675 2 0.1696986894116387 0.0005449591280653951 0.0019199547263121883 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 90067 7929 REAEEPVFAA True H1975_Epitope_Rep3 1117.54038800017 1117.53928993586 35.469 2 0.16969861595529298 0.0005449591280653951 0.0019199579789974726 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 138358 14862 YHFPDQQEL True PC9_epitope_Rep4 1175.52473793603 1175.52364993586 65.104 2 0.169697179639073 0.0005449591280653951 0.0019200215809362178 ['ENSG00000165490|ENST00000533655|DDIAS', 'DDIAS|p.P901T|1|0.37|ENSG00000165490|chr11:82934039-82934039|C/A|missense_variant'] 1844 4339 AEIDNIKNQRA True H1975_Epitope_Rep2 1270.6629627443401 1270.66132490379 21.805 3 0.16969641463364274 0.0005449591280653951 0.0019200554572257264 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 115361 19785 TRIWQDVQL True PC9_epitope_Rep3 1157.6193070272097 1157.61820993586 81.333 2 0.16968567166055348 0.0005449591280653951 0.001920531245199788 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 29029 13035 FTEQWTDGY True H1975_Epitope_Rep2 1145.4665543535698 1145.46544993586 55.259 2 0.16968337758418522 0.0005449591280653951 0.001920632861214293 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 7516 8476 ASDPFFRHY True H1975_Epitope_Rep2 1138.5195929859399 1138.51795490379 37.554 3 0.1696781616601925 0.0005449591280653951 0.0019208639203608755 ['ENST00000477418.2_1_1:27206170-27212721:-|nuORF', 'ENSG00000142751|ENST00000374135|GPN2'] 85422 13824 QEYEAIYLA True H1975_Epitope_Rep2 1098.5233409536997 1098.5222499358601 58.322 2 0.1696757202778273 0.0005449591280653951 0.0019209720802108319 ['ENSG00000198252|ENST00000354586|STYX'] 77388 9389 NSEPETLEY True H1975_Epitope_Rep3 1080.46113461996 1080.4600299358601 41.115 2 0.1696730023246158 0.0005449591280653951 0.0019210925000649945 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 39175 7097 HIDVGGHMY True H1975_Epitope_Rep3 1027.45455020123 1027.4534499358601 32.268 2 0.16966838198646803 0.0005449591280653951 0.0019212972230693056 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15'] 47614 15527 IVWQEDPRL True PC9_epitope_Rep6 1154.6084079903396 1154.60730993586 71.901 2 0.16966343626047914 0.0005449591280653951 0.0019215163878983318 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 106257 15021 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.5586299358602 63.169 2 0.16966026714848226 0.0005449591280653951 0.0019216568370277575 ['ENSG00000131459|ENST00000253778|GFPT2'] 34693 8109 GQDVGRYQV True PC9_epitope_Rep1 1020.49885754136 1020.49776993586 36.018 2 0.16964577895631922 0.0005449591280653951 0.0019222990574688855 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 89181 7541 QVSPEAGVQKV True PC9_epitope_Rep1 1140.6138872935999 1140.61278993586 33.824 2 0.16964375658728817 0.0005449591280653951 0.0019223887204237425 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 14915 16894 DYAYLREHF True PC9_epitope_Rep5 1212.5563724174797 1212.55526993586 69.995 2 0.16963324070011568 0.0005449591280653951 0.0019228550160851066 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 97923 5710 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 26.961 2 0.16963138665985036 0.0005449591280653951 0.0019229372397043273 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 43814 10026 IHSEPLGV True PC9_epitope_Rep3 850.45486747106 850.45376993586 43.52 2 0.16962219198563636 0.0005449591280653951 0.0019233450602735656 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 59784 8492 LGEISALTSK True H1975_Epitope_Rep1 1017.57062549929 1017.56952993586 37.594 2 0.16961972339030373 0.0005449591280653951 0.0019234545670802133 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 140409 11727 YRFGDSQQL True PC9_epitope_Rep4 1112.5250722892 1112.5239699358601 52.868 2 0.16961946286167567 0.0005449591280653951 0.001923466124485314 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 110327 4791 TETLVTREA True H1975_Epitope_Rep2 1018.5294889633 1018.52838993586 23.518 2 0.16961470396792733 0.0005449591280653951 0.0019236772477236143 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 109302 11948 TAVTVNQSL True PC9_epitope_Rep2 931.4974605590301 931.49636993586 51.28 2 0.16961308306166256 0.0005449591280653951 0.0019237491627911469 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 37112 14698 GVPTGFILPIR True H1975_Epitope_Rep3 1168.6968290719199 1168.69572993586 61.908 2 0.16961109958504395 0.0005449591280653951 0.0019238371677480458 ['ENSG00000100714|ENST00000652337|MTHFD1'] 70982 17615 LYHDIFSRL True PC9_epitope_Rep2 1162.61349337078 1162.6118549037901 73.035 3 0.16961040924324705 0.0005449591280653951 0.0019238677984968094 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 140731 13516 YSDAFLNDSY True H1975_Epitope_Rep3 1193.48768372097 1193.4865899358601 57.268 2 0.1696081008260484 0.0005449591280653951 0.0019239702274582392 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 28551 14167 FSEQQLDLY True H1975_Epitope_Rep2 1141.5291546101298 1141.52804993586 59.647 2 0.16960775768537012 0.0005449591280653951 0.001923985453743331 ['ENSG00000213445|ENST00000534313|SIPA1'] 70837 13034 LYDIDVAK True PC9_epitope_Rep1 935.49639792987 935.49530993586 55.004 2 0.16960291121968832 0.0005449591280653951 0.0019242005203054307 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF'] 105862 5330 SSNDWNVEK True NCI_RA007_Epitope_Rep4 1077.47270236317 1077.4716099358602 27.067 2 0.16959996000590064 0.0005449591280653951 0.001924331495027978 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 25538 7308 FEIIDDHRA True H1975_Epitope_Rep3 1114.54072235334 1114.5396299358601 33.083 2 0.16959783120189073 0.0005449591280653951 0.0019244259767816337 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000492525.1_1_8:29974982-29975219:-|nuORF', 'ENST00000406202.2_1_6:157297523-157298164:+|nuORF', 'RPS15A|p.G48R|1|0.21|ENSG00000134419|chr16:18788134-18788134|C/G|missense_variant'] 61397 8686 LITPAVVSER True NCI_RA007_Epitope_Rep5 1083.62880908175 1083.6277099358601 40.075 2 0.16959027925509912 0.0005449591280653951 0.001924761188881568 ['ENSG00000118181|ENST00000527673|RPS25'] 38244 6521 HEDVEALAA True H1975_Epitope_Rep2 953.4454249861699 953.44432993586 29.996 2 0.1695871865940097 0.0005449591280653951 0.001924898481258076 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 90539 8972 RELVKNWVP True NCI_RA007_Epitope_Rep4 1139.64512785223 1139.64402993586 41.347 2 0.16958663062324958 0.0005449591280653951 0.0019249231634839768 ['ENSG00000127540|ENST00000591899|UQCR11'] 76738 16536 NQVEALNNL True PC9_epitope_Rep5 1013.5141732523299 1013.51306993586 68.607 2 0.1695837412091746 0.0005449591280653951 0.0019250514436212774 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 26188 20143 FHDGFLLEV True PC9_epitope_Rep4 1075.53384606775 1075.53274993586 85.615 2 0.1695779748278766 0.0005449591280653951 0.0019253074768616242 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF', 'CEP76|p.V235Cfs*17|1|0.48|ENSG00000101624|chr18:12697227-12697228|-/C|frameshift_variant'] 23827 19346 EYIKFLRSI True PC9_epitope_Rep3 1167.6651945904698 1167.66355490379 79.636 3 0.16957643206486706 0.0005449591280653951 0.001925375982896402 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 87867 16913 QRIDEFEAL True PC9_epitope_Rep2 1119.5560380643099 1119.5549499358601 70.3 2 0.16957623832227575 0.0005449591280653951 0.0019253845861637144 ['ENSG00000092820|ENST00000367075|EZR'] 46643 8806 ITDLNSDQY True H1975_Epitope_Rep3 1067.47711903727 1067.4760299358602 38.879 2 0.16957498412627361 0.0005449591280653951 0.0019254402804930889 ['ENSG00000156671|ENST00000542569|SAMD8', 'nc|ENSG00000156671|Q96LT4-2|SAMD8'] 76810 5960 NRAPNTAEL True PC9_epitope_Rep5 984.4988575413599 984.49776993586 27.92 2 0.16957303125888482 0.0005449591280653951 0.0019255270035118076 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 95624 17451 RYALQMEQL True PC9_epitope_Rep1 1150.5804789903398 1150.57938993586 71.923 2 0.16957105212196233 0.0005449591280653951 0.0019256148970956614 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 39174 7093 HIDVGGHMY True H1975_Epitope_Rep2 1027.45455020123 1027.4534499358601 32.215 2 0.16957098808522322 0.0005449591280653951 0.0019256177410379304 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15'] 24109 14122 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 59.592 2 0.16955956770951455 0.0005449591280653951 0.0019261249997275238 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 38490 9040 HEQLSVAEI True H1975_Epitope_Rep1 1024.5189242795998 1024.5178299358602 39.679 2 0.16955898399263486 0.0005449591280653951 0.0019261509302634576 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000183785|ENST00000330423|TUBA8', 'ENST00000442868.1_1_1:202822165-202825009:-|nuORF'] 61913 17510 LLDELPM[Oxidation]IY True H1975_Epitope_Rep2 1121.56784899841 1121.5667499358601 72.648 2 0.16955402909387732 0.0005449591280653951 0.0019263710564820578 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 115301 10496 TRHPENWTL True PC9_epitope_Rep1 1152.56760580752 1152.56650993586 45.262 2 0.16954796035488331 0.0005449591280653951 0.0019266407004280121 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 42784 5747 IENIQRVAA True NCI_RA007_Epitope_Rep3 1012.5665431783599 1012.56544993586 29.584 2 0.16954792498731003 0.0005449591280653951 0.001926642271977482 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 141988 21110 YVITDLTQL True PC9_epitope_Rep4 1064.57537652656 1064.57426993586 89.362 2 0.16954575711085218 0.0005449591280653951 0.001926738603485983 ['ENSG00000134070|ENST00000256458|IRAK2'] 71307 19824 LYQEVFGRL True PC9_epitope_Rep1 1123.6025943339098 1123.6014899358602 81.067 2 0.1695387818725214 0.0005449591280653951 0.0019270485870652744 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 70892 19935 LYEKDIQLF True PC9_epitope_Rep5 1167.6175756917098 1167.61646993586 81.734 2 0.16953714881298085 0.0005449591280653951 0.0019271211683718269 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 88949 2613 QVHPDTGISSK True NCI_RA007_Epitope_Rep5 1167.5884008217502 1167.58675490379 14.745 3 0.1695352522606473 0.0005449591280653951 0.0019272054640436514 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 90533 8148 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64402993586 39.163 2 0.169530583952686 0.0005449591280653951 0.0019274129710819296 ['ENSG00000127540|ENST00000591899|UQCR11'] 54858 21712 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 88.809 2 0.16951660953554457 0.0005449591280653951 0.0019280342697662921 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 138377 14642 YHGEVPVSL True PC9_epitope_Rep3 999.5025459394699 999.50144993586 61.454 2 0.1695160150354455 0.0005449591280653951 0.0019280607055169637 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 53654 11219 KSDEMELLY True H1975_Epitope_Rep1 1126.5216267015398 1126.5205299358602 48.125 2 0.1695121223478826 0.0005449591280653951 0.0019282338113663178 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000493082.5_1_5:850626-880074:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-2|BRD9', 'ENST00000495794.5_1_5:864585-881375:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-3|BRD9', 'nc|ENSG00000028310|Q9H8M2-1|BRD9', 'ENST00000495265.5_1_5:864585-889814:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-6|BRD9'] 141858 21728 YVDPLDPSF True PC9_epitope_Rep1 1051.48622716899 1051.4851299358602 88.408 2 0.169509578584132 0.0005449591280653951 0.0019283469396542952 ['ENST00000472446.1_1_17:17412858-17494940:-|nuORF', 'nc|ENSG00000133027|Q9UBM1|PEMT', 'nc|ENSG00000133027|Q9UBM1-3|PEMT', 'ENSG00000133027|ENST00000255389|PEMT'] 115107 9166 TRDETNYGI True PC9_epitope_Rep3 1067.4883524273098 1067.48724993586 40.196 2 0.16950638541037608 0.0005449591280653951 0.0019284889584195448 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 115882 4756 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 23.383 3 0.16950139809951004 0.0005449591280653951 0.0019287107936926775 ['ENSG00000204560|ENST00000376442|DHX16'] 124739 18999 VHAPPMQLGF True PC9_epitope_Rep5 1095.5535359665098 1095.5524299358601 78.107 2 0.1694875062490596 0.0005449591280653951 0.001929328836909148 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 107555 11733 SVPEFPLSPPK True NCI_RA007_Epitope_Rep4 1196.6441247927198 1196.64302993586 52.1 2 0.1694707650356477 0.0005449591280653951 0.001930073910450796 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 71904 6938 MEQELAHAV True H1975_Epitope_Rep3 1026.4804305958999 1026.4798749679298 31.648 1 0.16946224834723655 0.0005449591280653951 0.0019304530590886955 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 77217 15989 NRTELPLTL True PC9_epitope_Rep6 1055.59750895347 1055.59640993586 73.811 2 0.16946163516646284 0.0005449591280653951 0.0019304803597399928 ['ENSG00000105447|ENST00000253237|GRWD1'] 108704 13448 SYREDPIVY True PC9_epitope_Rep3 1140.5451390274397 1140.5440499358601 56.773 2 0.1694585999229403 0.0005449591280653951 0.0019306155035932093 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 108688 14700 SYQRAFNEF True PC9_epitope_Rep5 1160.5250722892 1160.5239699358601 61.546 2 0.1694585815588246 0.0005449591280653951 0.0019306163212820554 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 44038 19268 IIIPEIQKV True PC9_epitope_Rep5 1051.66413196131 1051.66302993586 79.157 2 0.16945830610160917 0.0005449591280653951 0.0019306285864550703 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 10096 17214 AYTPFHAVL True PC9_epitope_Rep4 1017.5283667644899 1017.52726993586 74.222 2 0.16945617887555972 0.0005449591280653951 0.0019307233072218934 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 11801 6157 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 29.076 2 0.1694382885958731 0.0005449591280653951 0.0019315201065833408 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 62217 9076 LLEVLSQK True H1975_Epitope_Rep1 928.5593325396 928.55822993586 39.815 2 0.16943795801416642 0.0005449591280653951 0.001931534833164745 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 21536 21648 ERNDLIVFL True PC9_epitope_Rep1 1117.6131590176099 1117.61206993586 88.097 2 0.16942481755344224 0.0005449591280653951 0.0019321202985250411 ['ENSG00000129636|ENST00000320640|ITFG1'] 1874 10896 AEIEELTASA True H1975_Epitope_Rep1 1032.4975201286798 1032.49642993586 46.873 2 0.169406331362133 0.0005449591280653951 0.001932944240249053 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 78277 13252 NYIGLINRI True NCI_RA007_Epitope_Rep4 1074.61857875122 1074.61748993586 58.105 2 0.1693993676335871 0.0005449591280653951 0.0019332547093461768 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 134177 18933 VYLPNINKI True PC9_epitope_Rep3 1072.62808080576 1072.6269899358601 78.05 2 0.16939081823782196 0.0005449591280653951 0.0019336359416401896 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 38600 13793 HEYPWILSA True NCI_RA007_Epitope_Rep3 1114.54474510462 1114.54364993586 61.583 2 0.16938022744595757 0.0005449591280653951 0.0019341083075849247 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 90846 8507 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 37.676 3 0.16937943874339143 0.0005449591280653951 0.0019341434895753676 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 107408 13092 SVLNLVIVK True NCI_RA007_Epitope_Rep5 983.6379172134699 983.63682993586 57.038 2 0.1693768285051089 0.0005449591280653951 0.0019342599301485927 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 14131 8501 DSDFRKDDFY True H1975_Epitope_Rep1 1306.5465955794198 1306.54495490379 37.629 3 0.16937313096344211 0.0005449591280653951 0.0019344248864294016 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 7484 9150 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41947496793 40.148 1 0.16936787995691782 0.0005449591280653951 0.0019346591707186328 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 37527 6563 GVVEVTHDLQK True NCI_RA007_Epitope_Rep1 1223.6510010783097 1223.64934490379 29.543 3 0.1693652513146334 0.0005449591280653951 0.001934776463577559 ['ENSG00000149257|ENST00000358171|SERPINH1'] 118223 11432 TYLDKIKKF True PC9_epitope_Rep2 1154.66994561774 1154.6683049037902 49.293 3 0.16936273470476124 0.0005449591280653951 0.0019348887640941294 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 29382 15289 FVDPLVTNY True H1975_Epitope_Rep1 1066.53351171458 1066.5324099358602 64.079 2 0.16936085936104664 0.0005449591280653951 0.0019349724531632544 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 104889 16993 SRDAFGYATL True PC9_epitope_Rep1 1099.52982331647 1099.5287299358602 70.187 2 0.169359543124107 0.0005449591280653951 0.0019350311937017402 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 46172 18532 ISLPKGVVEV True PC9_epitope_Rep5 1039.62774645259 1039.62664993586 76.306 2 0.16935311502650058 0.0005449591280653951 0.001935318090107623 ['ENSG00000149257|ENST00000358171|SERPINH1'] 112496 15505 TLDPQTGLFY True H1975_Epitope_Rep1 1153.5655401188499 1153.5649749679299 64.913 1 0.16935309169636673 0.0005449591280653951 0.0019353191314467686 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 77663 8278 NTIDPSHPM True PC9_epitope_Rep2 1010.4491304676201 1010.44802993586 37.199 2 0.16935301465694153 0.0005449591280653951 0.001935322570100937 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 76710 16438 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53911496793 68.47 1 0.16935250917543654 0.0005449591280653951 0.0019353451324157448 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 76757 7493 NQWDGTQHGV True PC9_epitope_Rep2 1140.49483479008 1140.49372993586 34.193 2 0.16934520325518276 0.0005449591280653951 0.0019356712636880008 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 23728 22028 EYFSYPVSL True PC9_epitope_Rep1 1103.51752729727 1103.51642993586 89.545 2 0.16934345034707546 0.0005449591280653951 0.001935749520481205 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 132492 8474 VVDKIDYY True H1975_Epitope_Rep2 1013.5069626135701 1013.50586993586 37.547 2 0.169340508696078 0.0005449591280653951 0.0019358808545991621 ['ENSG00000133704|ENST00000256079|IPO8'] 104923 15176 SRDDNMFQI True PC9_epitope_Rep6 1124.49205790876 1124.4909699358602 70.451 2 0.1693350983823076 0.0005449591280653951 0.0019361224288873236 ['ENSG00000113387|ENST00000265073|SUB1'] 40847 13421 HSDTIQWLY True H1975_Epitope_Rep2 1161.54547338061 1161.54436993586 56.759 2 0.16932514897262146 0.0005449591280653951 0.0019365667556950257 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 88715 13082 QTHSVFVNV True PC9_epitope_Rep3 1029.5243440132099 1029.5232499358601 55.344 2 0.16932186664493615 0.0005449591280653951 0.001936713362261528 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 124904 7226 VHPPPTTTY True PC9_epitope_Rep5 1011.5025459394701 1011.50144993586 32.759 2 0.16932129878222224 0.0005449591280653951 0.0019367387272184043 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 53824 14971 KTETEPVFWYY True H1975_Epitope_Rep2 1461.6816325002499 1461.68052993586 62.738 2 0.16931711165295388 0.0006084781285917111 0.0019369257656982931 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 89564 17614 QYMERLQLL True PC9_epitope_Rep6 1192.62742918276 1192.6263299358602 80.393 2 0.16931324796663463 0.0006084781285917111 0.0019370983720552802 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 33123 5177 GISEETTTGVH True NCI_RA007_Epitope_Rep1 1129.52513185885 1129.5240299358602 24.219 2 0.16931209115812998 0.0006084781285917111 0.0019371500543215806 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 107378 12429 SVLKSIQEV True PC9_epitope_Rep4 1001.57571087973 1001.5746099358599 55.611 2 0.16930951299247898 0.0006084781285917111 0.0019372652429495408 ['ENSG00000039123|ENST00000230640|MTREX'] 24342 18095 EYVSQHLVF True PC9_epitope_Rep5 1120.5553097883198 1120.5542099358602 74.614 2 0.16930766824838192 0.0006084781285917111 0.0019373476675922947 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 49830 10214 KHTEMITTL True PC9_epitope_Rep5 1072.5586809166 1072.55758993586 44.276 2 0.16929800000642314 0.0006084781285917111 0.0019377797097541833 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1'] 107146 6568 SVIDTSTIVRK True NCI_RA007_Epitope_Rep3 1217.69795127073 1217.69629490379 32.887 3 0.16928941706612483 0.0006084781285917111 0.0019381633340830688 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 132919 15721 VVMQEGLAHI True PC9_epitope_Rep1 1095.5746653339097 1095.5735699358602 65.293 2 0.16928696996075696 0.0006084781285917111 0.0019382727241717941 ['ENSG00000152684|ENST00000274311|PELO'] 74964 14015 NHNIYITEV True PC9_epitope_Rep5 1101.54547338061 1101.54436993586 58.926 2 0.1692827795905941 0.0006084781285917111 0.0019384600557295268 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 97746 10823 SEIPKLPAV True NCI_RA007_Epitope_Rep3 952.5593325395998 952.55822993586 49.622 2 0.16928270811094015 0.0006084781285917111 0.0019384632514026225 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 17383 13074 EHDPHVLLAV True PC9_epitope_Rep2 1128.5927579262 1128.5916699358602 55.568 2 0.1692814941744625 0.0006084781285917111 0.0019385175242124483 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 43660 20419 IHDGFGFM[Oxidation]L True PC9_epitope_Rep5 1051.4797027003501 1051.47860993586 83.577 2 0.1692777035678419 0.0006084781285917111 0.0019386870048668226 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 129086 9754 VQPSKYHFL True PC9_epitope_Rep4 1117.5920296502102 1117.59092993586 45.156 2 0.16927675436990838 0.0006084781285917111 0.0019387294464859317 ['ENSG00000177383|ENST00000317897|MAGEF1'] 1506 13266 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52256993586 56.126 2 0.16927207672011202 0.0006084781285917111 0.001938938612466889 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 55033 7583 KYSLIKGNF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 36.959 2 0.1692693080627027 0.0006084781285917111 0.0019390624264997984 ['ENSG00000143546|ENST00000368733|S100A8'] 92467 13602 RLTEEFQNV True PC9_epitope_Rep1 1134.56693710118 1134.5658499358601 57.176 2 0.1692683117281199 0.0006084781285917111 0.0019391069843999109 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000486040.1_1_7:2274759-2277695:-|nuORF'] 90287 9523 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 41.601 2 0.16926729237255003 0.0006084781285917111 0.0019391525729005113 ['ENSG00000130255|ENST00000347512|RPL36'] 4053 6338 AHIPKSDAL True PC9_epitope_Rep5 950.5185303567799 950.51742993586 29.353 2 0.1692659385307719 0.0006084781285917111 0.00193921312223983 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 76796 17529 NRALPLEL True PC9_epitope_Rep5 924.53926580136 924.53816993586 72.431 2 0.16926436392942637 0.0006084781285917111 0.001939283547228401 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 96205 9668 RYPTSIASL True NCI_RA007_Epitope_Rep3 1006.5447451046199 1006.54364993586 45.107 2 0.16925982063584658 0.0006084781285917111 0.0019394867630961022 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 106284 4739 STFDTQITKK True NCI_RA007_Epitope_Rep4 1167.6135529404298 1167.61244993586 24.662 2 0.1692586401120334 0.0006084781285917111 0.001939539569943451 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 71926 15073 MEQPLDLTHIV True H1975_Epitope_Rep1 1294.65912323386 1294.6580299358602 63.229 2 0.16925754037113086 0.0006084781285917111 0.0019395887645270932 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 95989 16905 RYLGKVLEL True PC9_epitope_Rep5 1089.65462990677 1089.6535299358602 70.039 2 0.1692574115292437 0.0006084781285917111 0.0019395945280781298 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000573641.1_1_17:2598433-2598937:-|nuORF'] 23856 19967 EYIPKWEQF True PC9_epitope_Rep5 1238.5971746003 1238.5960699358602 81.854 2 0.16924689200930104 0.0006084781285917111 0.0019400651610297674 ['ENSG00000114405|ENST00000462069|C3orf14'] 32822 9811 GHLEKAVVL True PC9_epitope_Rep5 964.5705659296399 964.56946993586 42.705 2 0.1692413600911711 0.0006084781285917111 0.0019403126994204344 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 121971 13916 VFTPVVQRI True PC9_epitope_Rep6 1057.6284151589298 1057.62730993586 65.37 2 0.16923960269238955 0.0006084781285917111 0.0019403913448801748 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 8447 4869 ATPKFGPYQK True NCI_RA007_Epitope_Rep3 1135.6025943339098 1135.60093490379 26.137 3 0.16923501694660004 0.0006084781285917111 0.001940596576884567 ['ENSG00000150457|ENST00000382592|LATS2'] 99302 7790 SHSEAGSRIVL True PC9_epitope_Rep1 1154.6043852390599 1154.6027249037902 34.788 3 0.169228553024607 0.0006084781285917111 0.001940885902290324 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'nc|ENSG00000159322|Q9BRR6-4|ADPGK', 'nc|ENSG00000159322|Q9BRR6-3|ADPGK', 'ENST00000562621.1_1_15:73044684-73048205:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF'] 107629 4607 SVQAPSYGAR True H1975_Epitope_Rep3 1034.5145076054998 1034.5134099358602 22.843 2 0.16922766019197996 0.0006084781285917111 0.001940925868905581 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 83293 10567 PTDGPPNSFY True H1975_Epitope_Rep1 1093.47163973401 1093.4705499358602 45.598 2 0.1692201875450723 0.0006084781285917111 0.0019412604055422896 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 103393 6166 SPPPPPPPP True H1975_Epitope_Rep2 881.4647038787699 881.46360993586 28.69 2 0.1692174452956556 0.0006084781285917111 0.0019413831854629053 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 8227 5119 ATGDM[Oxidation]SGLLK True NCI_RA007_Epitope_Rep5 1007.4957466873099 1007.49464993586 26.387 2 0.16921451948593863 0.0006084781285917111 0.0019415141925732556 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 84891 10462 QEASEAYLV True H1975_Epitope_Rep1 1008.4763907612797 1008.47528993586 45.197 2 0.16921149190571477 0.0006084781285917111 0.0019416497659061139 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 54764 16937 KYNANFVTF True PC9_epitope_Rep2 1102.54474510462 1102.54364993586 70.39 2 0.1692093246810096 0.0006084781285917111 0.0019417468188199518 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 92356 15929 RLPDIPLRQV True PC9_epitope_Rep5 1205.72444080209 1205.72278490379 66.263 3 0.16920434250960475 0.0006084781285917111 0.001941969949410929 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 116756 17261 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54427496793 71.686 1 0.16920196585307398 0.0006084781285917111 0.001942076398938292 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 41549 19892 HYSENMFSF True PC9_epitope_Rep1 1160.4596951513201 1160.4585899358601 81.333 2 0.1692018204560037 0.0006084781285917111 0.0019420829114063247 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 21791 17141 ERYFISHVL True PC9_epitope_Rep5 1162.61349337078 1162.6118549037901 70.954 3 0.1692007718548075 0.0006084781285917111 0.0019421298798618166 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 92897 19833 RPFTIPYLTA True PC9_epitope_Rep4 1177.64954452633 1177.64844993586 84.417 2 0.1691983094957187 0.0006084781285917111 0.001942240177167896 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8', 'nc|ENSG00000137413|Q7Z7C8-4|TAF8', 'TAF8-CRISP1|1|fusion', 'TAF8-CRISP1|2|fusion'] 89501 22531 QYILFPLRF True PC9_epitope_Rep5 1195.67536535135 1195.6742699358601 91.67 2 0.16918916464645772 0.0006084781285917111 0.0019426498604254985 ['ENSG00000101407|ENST00000373447|TTI1'] 84208 20872 PYLDSFYEY True PC9_epitope_Rep4 1195.5073565363898 1195.50624993586 88.44 2 0.16918352654086338 0.0006084781285917111 0.001942902486936654 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 49477 20349 KFAEEFYSF True PC9_epitope_Rep5 1166.5284263341398 1166.52732993586 83.307 2 0.1691804983838117 0.0006084781285917111 0.001943038183087166 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 75681 23324 NLIDLDDLYV True PC9_epitope_Rep2 1191.6023195503901 1191.6012299358601 95.189 2 0.16917791435752458 0.0006084781285917111 0.0019431539845840692 ['ENSG00000125676|ENST00000245838|THOC2'] 93388 8064 RQAPIPAEL True NCI_RA007_Epitope_Rep3 993.5607295219298 993.55962993586 38.806 2 0.1691769959841833 0.0006084781285917111 0.001943195142564791 ['ENSG00000169583|ENST00000494426|CLIC3'] 8473 6986 ATQSFSTFR True NCI_RA007_Epitope_Rep5 1043.50360856863 1043.5025099358602 33.553 2 0.16917075236438214 0.0006084781285917111 0.0019434749808418382 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 99603 5154 SIFEPAKGGEK True NCI_RA007_Epitope_Rep4 1161.6029882567298 1161.60188993586 26.348 2 0.16917005273979036 0.0006084781285917111 0.0019435063404420066 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 116559 14172 TTVSELVKV True PC9_epitope_Rep4 974.5648118428599 974.56370993586 62.417 2 0.16916189097684084 0.0006084781285917111 0.0019438722163544575 ['ENSG00000008838|ENST00000394128|MED24', 'nc|ENSG00000008838|O75448-2|MED24', 'ENST00000491466.5_1_17:38175784-38176226:-|nuORF'] 124751 18546 VHAYIISSL True PC9_epitope_Rep1 1001.55458151233 1001.55348993586 76.127 2 0.16915579241191803 0.0006084781285917111 0.0019441456480962492 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 142657 20418 YYPEHFTLL True PC9_epitope_Rep5 1181.57571087973 1181.57460993586 83.573 2 0.1691515885931014 0.0006084781285917111 0.0019443341504928582 ['ENSG00000100065|ENST00000251973|CARD10'] 10168 18855 AYVLNIVRF True PC9_epitope_Rep6 1093.62841515893 1093.62730993586 85.174 2 0.16915102892378678 0.0006084781285917111 0.0019443592478646738 ['ATP1B1|p.K203Efs*3|1|0.39|ENSG00000143153|chr1:169130047-169130048|-/G|frameshift_variant', 'nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 101265 22112 SLIADLEQL True PC9_epitope_Rep4 1000.5440763982799 1000.54357496793 93.271 1 0.1691469394886822 0.0006084781285917111 0.001944542641119697 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 25376 9920 FEAPATINSA True H1975_Epitope_Rep2 1019.49237517859 1019.49126993586 43.146 2 0.16914276660980038 0.0006084781285917111 0.0019447297942980504 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 92817 14448 RPAQPTLWTA True PC9_epitope_Rep1 1139.60874234351 1139.60764993586 60.397 2 0.16913682180443898 0.0006084781285917111 0.0019449964493102898 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 48380 12253 IYTNLNQKI True PC9_epitope_Rep5 1105.61315901761 1105.61206993586 52.119 2 0.16913633159550231 0.0006084781285917111 0.0019450184393275942 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 11010 5046 DAPQDFHPDR True NCI_RA007_Epitope_Rep1 1196.52104953792 1196.51941490379 23.712 3 0.16913187069765637 0.0006084781285917111 0.0019452185597575089 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 70606 25711 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 107.01 3 0.1691263543569369 0.0006084781285917111 0.0019454660569131052 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 21939 6504 ESEAVEWQQK True NCI_RA007_Epitope_Rep2 1232.5673310239997 1232.56622993586 29.908 2 0.16912519234850595 0.0006084781285917111 0.0019455181958129043 ['ENSG00000147065|ENST00000360270|MSN'] 2066 6399 AELDEKISA True H1975_Epitope_Rep1 974.49204082542 974.49094993586 29.673 2 0.16912157043745016 0.0006084781285917111 0.0019456807186254523 ['nc|ENSG00000151332|Q9NS73-5|MBIP', 'ENSG00000151332|ENST00000416007|MBIP'] 77576 12853 NTDPSIVMTY True H1975_Epitope_Rep2 1139.51687567427 1139.5157699358601 54.549 2 0.1691116767590148 0.0006084781285917111 0.0019461247381271354 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 118118 15377 TYHPGVPVF True PC9_epitope_Rep4 1015.5127167003499 1015.51160993586 67.08 2 0.1690994200775892 0.0006084781285917111 0.0019466749476628523 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 134255 19233 VYNENLVHMI True PC9_epitope_Rep1 1230.60669373818 1230.60558993586 78.779 2 0.16909399465548794 0.0006084781285917111 0.00194691854768445 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 39849 20166 HPAAFPLPVV True PC9_epitope_Rep5 1046.59130137422 1046.59020993586 82.617 2 0.16909370217978784 0.0006084781285917111 0.00194693168063238 ['ENSG00000108523|ENST00000262482|RNF167'] 138859 13998 YKDGTELEL True PC9_epitope_Rep3 1066.51825557326 1066.51714993586 58.915 2 0.1690931262766697 0.0006084781285917111 0.0019469575404949863 ['ENSG00000143815|ENST00000272163|LBR'] 3420 12833 [Acetylation]-AGITTIEAVK True NCI_RA007_Epitope_Rep1 1043.58627587973 1043.5851699358602 53.907 2 0.16909116772541094 0.0006084781285917111 0.001947045488181874 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 108345 12275 SYLDRTEQL True PC9_epitope_Rep4 1123.55095268387 1123.54984993586 55.032 2 0.16908635295468047 0.0006084781285917111 0.0019472617097543248 ['ENSG00000065268|ENST00000585809|WDR18'] 40963 6968 HTDGNNIYV True PC9_epitope_Rep4 1031.4672230599099 1031.4661299358602 34.042 2 0.16908117409629658 0.0006084781285917111 0.0019474943085742195 ['ZNF800|p.I552*|1|0.23|ENSG00000048405|chr7:127373686-127373686|C/-|frameshift_variant', 'ENSG00000048405|ENST00000265827|ZNF800'] 75557 12976 NLAENISRV True PC9_epitope_Rep5 1014.54580773378 1014.5447099358599 54.921 2 0.16907940500816734 0.0006084781285917111 0.001947573770254556 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 22225 15118 ESYSIYVYK True PC9_epitope_Rep1 1150.55464108198 1150.55354993586 62.969 2 0.16907775575549278 0.0006084781285917111 0.0019476478522372485 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 9913 18460 AYLPEWKENI True PC9_epitope_Rep4 1261.6342883850098 1261.6331899358602 79.076 2 0.16906802486018666 0.0006084781285917111 0.0019480850069940093 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 137821 12160 YEQVREWFA True H1975_Epitope_Rep2 1226.5720224816198 1226.57092993586 51.858 2 0.16906801001902255 0.0006084781285917111 0.0019480856737995413 ['ENSG00000165156|ENST00000395571|ZHX1'] 127284 12485 VMAPRTLLL True H1975_Epitope_Rep2 1012.6103225666399 1012.60922993586 53.115 2 0.16906685822128892 0.0006084781285917111 0.0019481374241495219 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENST00000463348.5_1_6:30227401-30227711:+|nuORF'] 95884 6804 RYLDKTEQW True NCI_RA007_Epitope_Rep3 1237.6091362663299 1237.60750490379 33.869 3 0.1690606224768967 0.0006084781285917111 0.0019484176204415085 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 11685 14549 DGTGVVEFVR True PC9_epitope_Rep4 1077.5454733806098 1077.54436993586 63.876 2 0.16906000783688088 0.0006084781285917111 0.0019484452407945853 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 95756 9646 RYIANTVEL True NCI_RA007_Epitope_Rep4 1077.58185888933 1077.5807699358602 43.955 2 0.16905808051315113 0.0006084781285917111 0.0019485318523417968 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 22221 9920 ESYSIYVYK True H1975_Epitope_Rep1 1150.55464108198 1150.55354993586 43.093 2 0.16905275891459162 0.0006084781285917111 0.001948771018402828 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 90408 12116 REIEELLAEA True NCI_RA007_Epitope_Rep3 1171.6084675599898 1171.60736993586 54.772 2 0.1690443790876287 0.0006084781285917111 0.0019491476884856652 ['nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10', 'ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF'] 142824 9953 YYSPTKNEI True PC9_epitope_Rep1 1113.53423999057 1113.5331499358601 43.146 2 0.16904109403209458 0.0006084781285917111 0.001949295370370117 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 75760 15839 NLLPKLHIV True PC9_epitope_Rep6 1045.66480066765 1045.6637099358602 73.194 2 0.1690394588328071 0.0006084781285917111 0.0019493688860276694 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 109788 5984 TEEAAVAIKA True H1975_Epitope_Rep2 1001.5393253710098 1001.53822993586 27.996 2 0.16903718836279397 0.0006084781285917111 0.0019494709669280908 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 73051 16000 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 69.476 2 0.16902782298926788 0.0006084781285917111 0.0019498920929849261 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 68328 16226 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.5222499358601 67.623 2 0.1690277474297131 0.0006084781285917111 0.0019498954909874153 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 53678 11292 KSDVEAIFSK True PC9_epitope_Rep3 1122.5920892198599 1122.59044490379 48.44 3 0.16902414883480651 0.0006084781285917111 0.0019500573309124926 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 76041 14479 NMDNMFESY True H1975_Epitope_Rep3 1149.41069635357 1149.4095899358601 61.053 2 0.16901407747695205 0.0006084781285917111 0.0019505103423985025 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 28553 11712 FSEQVAMGY True H1975_Epitope_Rep2 1030.4429824580197 1030.4418899358602 50.125 2 0.16901310159516109 0.0006084781285917111 0.0019505542433303712 ['ENSG00000179051|ENST00000375436|RCC2'] 54810 7708 KYPDRVPVI True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 37.441 2 0.1690099499941379 0.0006084781285917111 0.0019506960277249853 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 3936 13831 AHDDSVMYL True PC9_epitope_Rep4 1049.44879611445 1049.4476899358601 61.099 2 0.1690058149353723 0.0006084781285917111 0.001950882071604733 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 66164 10417 LSEPSSLQY True H1975_Epitope_Rep2 1022.49204082542 1022.4909499358599 45.082 2 0.16900341061832908 0.0006084781285917111 0.0019509902543989519 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 92895 20897 RPFTIPYLTA True PC9_epitope_Rep1 1177.64954452633 1177.64844993586 85.201 2 0.16899901353511326 0.0006084781285917111 0.0019511881176838455 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8', 'nc|ENSG00000137413|Q7Z7C8-4|TAF8', 'TAF8-CRISP1|1|fusion', 'TAF8-CRISP1|2|fusion'] 95916 8312 RYLEKPMEI True NCI_RA007_Epitope_Rep1 1177.6165301458898 1177.6154299358602 36.332 2 0.16899647397245446 0.0006084781285917111 0.001951302403993787 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 27521 18438 FMTTNVPNV True PC9_epitope_Rep3 1021.4902670036099 1021.48916993586 76.125 2 0.16899383357374456 0.0006084781285917111 0.00195142123526356 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ADD1|p.D96Y|1|0.17|ENSG00000087274|chr4:2881988-2881988|G/T|missense_variant', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF'] 76608 19695 NQPGVLIQV True PC9_epitope_Rep1 966.5498304850599 966.54872993586 80.582 2 0.16899078027635905 0.0006084781285917111 0.0019515586580826226 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 3913 10439 AHDDGRWSL True PC9_epitope_Rep3 1055.47845644995 1055.47734993586 45.091 2 0.16898950338570806 0.0006084781285917111 0.001951616131251838 ['ENSG00000075618|ENST00000382361|FSCN1'] 4398 5579 AINVNDSVTK True NCI_RA007_Epitope_Rep1 1059.5560380643099 1059.5549499358601 25.767 2 0.16898661974720355 0.0006084781285917111 0.0019517459307747162 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 141395 7529 YTEKNGQLIY True H1975_Epitope_Rep2 1227.6135529404298 1227.61244993586 33.911 2 0.16898548172309283 0.0006084781285917111 0.0019517971583604913 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 136442 15714 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.5331499358601 65.612 2 0.16898041121273835 0.0006084781285917111 0.001952025421192152 ['ENSG00000116221|ENST00000360840|MRPL37'] 54461 10535 KYGNANVW True PC9_epitope_Rep5 950.46101548066 950.45990993586 45.51 2 0.1689785783201152 0.0006084781285917111 0.0019521079404153316 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 108708 13276 SYREDPIVY True PC9_epitope_Rep5 1140.5451390274397 1140.5440499358601 56.076 2 0.1689740875722714 0.0006084781285917111 0.0019523101345042132 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 31675 9924 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51676993586 46.119 2 0.16897063218653754 0.0006084781285917111 0.0019524657260964811 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 117736 11177 TVVERLVKV True PC9_epitope_Rep2 1041.65462990677 1041.6535299358602 48.319 2 0.16897036302530966 0.0006084781285917111 0.0019524778466023867 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 23525 6048 EVVQNFAK True NCI_RA007_Epitope_Rep2 933.4919812557698 933.49088993586 28.13 2 0.1689687591677728 0.0006084781285917111 0.0019525500709152185 ['ENSG00000103187|ENST00000262428|COTL1'] 134648 19186 VYSQFITQL True PC9_epitope_Rep6 1097.5757108797297 1097.57460993586 86.451 2 0.16896749954115628 0.0006084781285917111 0.0019526067958234746 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 53051 12537 KPNPNQIISV True PC9_epitope_Rep1 1108.62405805448 1108.62296993586 53.094 2 0.16896538652648133 0.0006084781285917111 0.0019527019551546776 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 35572 8292 GSYTFDPVTK True NCI_RA007_Epitope_Rep3 1113.5342399905699 1113.5331499358601 39.738 2 0.16896268639362486 0.0006084781285917111 0.00195282356202509 ['ENSG00000185009|ENST00000355264|AP3M1'] 74252 5434 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 25.961 2 0.16895577408208795 0.0006084781285917111 0.0019531349088447165 ['ENSG00000167658|ENST00000309311|EEF2'] 105620 6818 SSDPDPAAY True H1975_Epitope_Rep3 921.3715913395699 921.3710449679301 31.179 1 0.1689544719947401 0.0006084781285917111 0.0019531935634878976 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 107312 19077 SVLDVDGMKV True PC9_epitope_Rep5 1061.54269649929 1061.5415899358602 78.409 2 0.16895333699473072 0.0006084781285917111 0.0019532446928472863 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 101517 21024 SLLENLEKI True PC9_epitope_Rep1 1057.60192562757 1057.60082993586 85.696 2 0.1689425920912507 0.0006084781285917111 0.0019537287944448706 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 134660 17651 VYSQIPAAVKL True PC9_epitope_Rep5 1187.6914093383098 1187.6903099358601 72.907 2 0.16893501746033204 0.0006084781285917111 0.001954070134489281 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 82661 22290 PQPDVFPLF True PC9_epitope_Rep4 1058.54368247546 1058.5425899358602 93.978 2 0.1689327134363912 0.0006084781285917111 0.0019541739739051206 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 49456 6637 KEYGQIESV True NCI_RA007_Epitope_Rep4 1051.51858992643 1051.51748993586 32.154 2 0.16892942851584752 0.0006084781285917111 0.0019543220306219573 ['nc|ENSG00000188739|P42696-2|RBM34', 'ENST00000476261.5_1_1:235316002-235324541:-|nuORF', 'ENSG00000188739|ENST00000408888|RBM34'] 46693 5614 ITDTTRDVY True H1975_Epitope_Rep2 1082.52440358286 1082.5233099358602 26.597 2 0.16892416456547849 0.0006084781285917111 0.0019545593088306943 ['ENSG00000161904|ENST00000293760|LEMD2'] 126446 19035 VLKVFLENV True PC9_epitope_Rep4 1059.63283183303 1059.6317299358602 81.307 2 0.16891864503913964 0.0006531678641410843 0.0019548081383477774 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 35493 4449 GSMGSFSEK True NCI_RA007_Epitope_Rep3 928.3960322656001 928.39492993586 24.304 2 0.16891837664468146 0.0006531678641410843 0.001954820238828489 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1', 'EMC1|p.D350N|1|0.27|ENSG00000127463|chr1:19238836-19238836|C/T|missense_variant'] 44683 15875 ILTERGYSF True PC9_epitope_Rep1 1084.55530978832 1084.5542099358602 65.872 2 0.16891740647656814 0.0006531678641410843 0.0019548639791811587 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 33402 15643 GLADNTVIAKV True PC9_epitope_Rep3 1099.62372370131 1099.62262993586 65.318 2 0.1689173031130571 0.0006531678641410843 0.0019548686394171995 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 2128 11902 AELNAQIITA True H1975_Epitope_Rep3 1042.56587447202 1042.56476993586 50.933 2 0.1689144161064764 0.0006531678641410843 0.001954998807172269 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 7271 12950 ARDFTVSAL True PC9_epitope_Rep6 978.5134449763399 978.51234993586 61.362 2 0.16891057931716857 0.0006531678641410843 0.001955171811622024 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 27789 23188 FQAEIAQLMSL True PC9_epitope_Rep3 1249.63765951329 1249.63656993586 94.463 2 0.16890984594236108 0.0006531678641410843 0.001955204881927197 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 48403 16092 IYVHDLLTF True NCI_RA007_Epitope_Rep1 1119.59644632431 1119.5953499358602 66.699 2 0.1689084191209128 0.0006531678641410843 0.0019552692236470617 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 97454 13435 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.40686993586 56.948 2 0.16890422794480767 0.0006531678641410843 0.0019554582346506 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 134193 9267 VYLPTHTSL True NCI_RA007_Epitope_Rep3 1029.54949613189 1029.54838993586 43.56 2 0.1689022452432708 0.0006531678641410843 0.0019555476556353344 ['ENSG00000007944|ENST00000356840|MYLIP'] 21584 4560 ERQPGAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 24.036 2 0.16890198479770763 0.0006531678641410843 0.0019555594021846085 ['ENSG00000180921|ENST00000388913|FAM83H'] 54792 18355 KYNLINEYF True PC9_epitope_Rep6 1202.5971746003 1202.5960699358602 83.245 2 0.1689007325508231 0.0006531678641410843 0.001955615881689209 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 116265 11917 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.49807496793 50.918 1 0.16889247994710566 0.0006531678641410843 0.001955988135817586 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 13223 10275 DLSLEEIQK True H1975_Epitope_Rep3 1073.5604547384098 1073.5593499358602 44.573 2 0.16888496510223427 0.0006531678641410843 0.001956327173159538 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2', 'ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 68378 7917 LTEQYNEQY True H1975_Epitope_Rep1 1186.51423282198 1186.5131299358602 35.404 2 0.1688790877091334 0.0006531678641410843 0.001956592376712594 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 138176 8468 YGNEVFLAK True H1975_Epitope_Rep1 1039.53384606775 1039.53274993586 37.501 2 0.16887787164857795 0.0006531678641410843 0.0019566472530772863 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 16959 5781 EFTEAVEAK True H1975_Epitope_Rep3 1022.4920408254197 1022.4909499358599 27.262 2 0.16887015697261692 0.0006531678641410843 0.001956995424047518 ['ENSG00000167085|ENST00000300408|PHB1'] 7003 15526 AQLQDFVRA True PC9_epitope_Rep3 1046.55089311422 1046.5497899358602 64.87 2 0.16886651243988815 0.0006531678641410843 0.001957159926972227 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 98068 8574 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 37.97 1 0.16886446647945252 0.0006531678641410843 0.0019572522813539237 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 110788 14688 TGISDVFAK True PC9_epitope_Rep1 936.4916469026 936.49054993586 61.319 2 0.16886171293849855 0.0006531678641410843 0.0019573765827069533 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 43808 12199 IHSENFQTL True PC9_epitope_Rep3 1087.5298233164701 1087.5287299358602 51.955 2 0.1688541215527395 0.0006531678641410843 0.001957719316712922 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 88645 10644 QTELSQLLK True H1975_Epitope_Rep3 1058.5971746003 1058.5960699358602 46.015 2 0.16885401969304611 0.0006531678641410843 0.001957723915857237 ['ENST00000380591.7_1_5:72801034-72801127:+|nuORF'] 85211 9088 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 39.909 2 0.16884730382087285 0.0006531678641410843 0.0019580271731448654 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 88711 12918 QTHSVFVNV True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 54.561 2 0.1688446346753241 0.0006531678641410843 0.0019581477122859845 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 134912 10247 VYVVGTAHF True NCI_RA007_Epitope_Rep5 991.5127167003499 991.51160993586 46.046 2 0.1688421312316063 0.0006531678641410843 0.0019582607750449066 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 77098 15777 NRLTEMETL True PC9_epitope_Rep1 1105.5437591284501 1105.5426699358602 65.505 2 0.16883514103912217 0.0006531678641410843 0.0019585765069263105 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 120658 7583 VEILANDQGNR True PC9_epitope_Rep3 1227.6207635791898 1227.6196699358602 34.167 2 0.1688334037793255 0.0006531678641410843 0.0019586549830945045 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 47977 12201 IYKDSSTFL True PC9_epitope_Rep6 1072.5440763982801 1072.5429699358601 58.298 2 0.16883245431971247 0.0006531678641410843 0.0019586978737787023 ['ENSG00000145388|ENST00000388822|METTL14'] 28266 13858 FRMTDQEAI True PC9_epitope_Rep3 1109.5175443806097 1109.51644993586 58.385 2 0.16883209160556262 0.0006531678641410843 0.001958714259197624 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 140408 13416 YRFGDSQQL True PC9_epitope_Rep3 1112.5250722892 1112.5239699358601 56.645 2 0.16883098539582625 0.0006531678641410843 0.0019587642324811446 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 135412 16916 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.5550749037902 70.224 3 0.168827722690093 0.0006531678641410843 0.001958911633403221 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 94956 11119 RTLAEIAKV True PC9_epitope_Rep3 999.6076797143498 999.60658993586 47.767 2 0.16882315186543417 0.0006531678641410843 0.0019591181505402215 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 141237 8403 YTDATPLRV True H1975_Epitope_Rep2 1034.53965972418 1034.53856993586 37.275 2 0.16882278811904552 0.0006531678641410843 0.001959134586116728 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 42935 8555 IESDPVTPP True H1975_Epitope_Rep2 953.47057710485 953.47002496793 37.862 1 0.1688217307923436 0.0006531678641410843 0.0019591823613229788 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant'] 38371 4458 HEISEGNVATA True H1975_Epitope_Rep3 1126.52546621202 1126.52436993586 22.267 2 0.168820516713131 0.0006531678641410843 0.001959237220813708 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 116696 7700 TVDARVYSY True H1975_Epitope_Rep2 1072.5189242796 1072.5178299358602 34.572 2 0.1688199801425384 0.0006531678641410843 0.00195926146682956 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 14609 11776 DVAASEFFR True H1975_Epitope_Rep1 1040.4927095317598 1040.4916099358602 50.288 2 0.16881599211124995 0.0006531678641410843 0.0019594416834077923 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'ENO1|p.S254Y|1|0.15|ENSG00000074800|chr1:8865389-8865389|G/T|missense_variant'] 82657 23255 PQPDVFPLF True PC9_epitope_Rep1 1058.54368247546 1058.5425899358602 94.236 2 0.1688149457663915 0.0006531678641410843 0.001959488969807089 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 9742 11913 AYHELAQVY True PC9_epitope_Rep2 1092.5240096600398 1092.52290993586 51.148 2 0.1688061920376973 0.0006531678641410843 0.00195988461288706 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3'] 140415 14379 YRFNGQYSSL True PC9_epitope_Rep2 1233.5778361380499 1233.5767299358602 60.569 2 0.1688056311007213 0.0006531678641410843 0.0019599099683309975 ['ENST00000592618.5_1_19:1010351-1011343:-|nuORF', 'ENSG00000182087|ENST00000356663|TMEM259'] 141209 9282 YTADGKEVLEY True H1975_Epitope_Rep2 1286.6030478263801 1286.6019499358601 40.661 2 0.1688003435987714 0.0006531678641410843 0.001960148989841519 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 140468 20099 YRIESYWTY True PC9_epitope_Rep5 1279.5873381925899 1279.58624993586 82.357 2 0.1687994494241874 0.0006531678641410843 0.001960189413883134 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 86983 5010 QLYWSHPRK True NCI_RA007_Epitope_Rep2 1213.6356257976897 1213.63399490379 24.111 3 0.16879749340767966 0.0006531678641410843 0.0019602778448154657 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 60596 7892 LHHDDPEVL True PC9_epitope_Rep3 1073.51417325233 1073.5130699358601 35.34 2 0.16879353262794944 0.0006531678641410843 0.001960456922725548 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 111526 20891 TIAEGLTLAQV True PC9_epitope_Rep3 1114.62338934814 1114.6222899358602 85.632 2 0.168779659020214 0.0006531678641410843 0.0019610843163120955 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 76065 7685 NMEADPGQY True H1975_Epitope_Rep3 1023.3967605415899 1023.39617496793 34.544 1 0.1687752377028903 0.0006531678641410843 0.0019612842997317756 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 28507 9833 FSEDGYRTV True PC9_epitope_Rep2 1072.48253877088 1072.4814499358602 43.159 2 0.16877140012197767 0.0006531678641410843 0.0019614578963338073 ['ENSG00000180340|ENST00000315323|FZD2'] 134004 9108 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 40.375 3 0.1687687659986738 0.0006531678641410843 0.0019615770622874833 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 159 11067 AADPSVVNL True H1975_Epitope_Rep3 884.46034677432 884.4597949679301 47.661 1 0.16875961839770298 0.0006531678641410843 0.0019619909497982885 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 101267 23105 SLIADLEQL True PC9_epitope_Rep5 1000.5440763982799 1000.54357496793 93.86 1 0.16875544836049125 0.0006531678641410843 0.0019621796540779143 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 21168 10705 ERDAYVQAL True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 48.928 2 0.16874961463474578 0.0006531678641410843 0.0019624436747534705 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 132262 13373 VTVSDLQHV True PC9_epitope_Rep5 996.5240096600402 996.52290993586 56.455 2 0.1687470434213527 0.0006531678641410843 0.0019625600530919734 ['ENSG00000068489|ENST00000262293|PRR11'] 78416 16530 NYLPQISHL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 76.023 2 0.16874424950148678 0.0006531678641410843 0.0019626865194032673 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 6360 6630 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 30.525 2 0.168741785857397 0.0006531678641410843 0.0019627980425999097 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 142099 14223 YVPETVYRV True PC9_epitope_Rep1 1124.5866099165999 1124.58550993586 59.534 2 0.16874031282871385 0.0006531678641410843 0.001962864726065839 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 108295 23288 SYIPLFPQL True PC9_epitope_Rep5 1076.5906326678798 1076.5895299358601 94.561 2 0.16873476137294172 0.0006531678641410843 0.0019631160587862415 ['ENSG00000165996|ENST00000361271|HACD1'] 54888 15527 KYPLNLYLL True NCI_RA007_Epitope_Rep3 1135.66413196131 1135.66302993586 68.636 2 0.16872562254781512 0.0006531678641410843 0.0019635298736643625 ['ENSG00000155957|ENST00000358230|TMBIM4'] 39142 7272 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.5406899358602 33.359 2 0.16872445179226347 0.0006531678641410843 0.001963582892916938 ['ENSG00000156482|ENST00000287038|RPL30'] 73639 20770 MWSPTHPALF True PC9_epitope_Rep5 1185.5641006502099 1185.56300993586 84.943 2 0.16872405277994837 0.0006531678641410843 0.0019636009630578104 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 53818 8554 KTEIM[Oxidation]SPLY True H1975_Epitope_Rep2 1096.5474479069999 1096.54634993586 37.858 2 0.16872271895636914 0.0006531678641410843 0.0019636613693680724 ['ENSG00000108592|ENST00000427159|FTSJ3', 'ENST00000583202.5_1_17:61898213-61899202:-|nuORF'] 29734 20880 FVNDIFERI True PC9_epitope_Rep3 1151.59750895347 1151.59640993586 85.589 2 0.16871661870710136 0.0006531678641410843 0.001963937661640527 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 114977 19017 TQYPFDFRGA True PC9_epitope_Rep3 1200.5563724174797 1200.55526993586 78.371 2 0.16871614801428225 0.0006531678641410843 0.001963958981858672 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 49071 10700 KEIDYILST True H1975_Epitope_Rep3 1080.5702911461199 1080.56918993586 46.233 2 0.16871079040002981 0.0006531678641410843 0.0019642016734377813 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 99308 7381 SHSELIHNL True PC9_epitope_Rep4 1048.5301576696402 1048.5290699358602 35.731 2 0.16870835506344115 0.0006531678641410843 0.0019643120003073273 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 2778 8698 AETSPAPIP True H1975_Epitope_Rep3 881.44944773745 881.4488949679301 38.456 1 0.1687026699462734 0.0006531678641410843 0.001964569574530168 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 106987 10326 SVELPIVGK True NCI_RA007_Epitope_Rep5 940.5593325395998 940.55822993586 46.35 2 0.16870216435750238 0.0006531678641410843 0.0019645924827534703 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 43427 8458 IGGIGTVPVGR True H1975_Epitope_Rep1 1024.6029286870798 1024.60182993586 37.464 2 0.16870170206905746 0.0006531678641410843 0.0019646134292731687 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 109406 5501 TDEGIAYR True NCI_RA007_Epitope_Rep1 923.4348603024698 923.43376993586 25.469 2 0.16869733541986512 0.0006531678641410843 0.001964811295343255 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 141308 5221 YTDSEPRATY True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 25.15 2 0.1686968785353531 0.0006531678641410843 0.0019648319993129174 ['ENSG00000158480|ENST00000289431|SPATA2'] 14989 20604 DYIKFLRSI True PC9_epitope_Rep5 1153.64954452633 1153.64788490379 84.302 3 0.16869367389071468 0.0006531678641410843 0.0019649772256572907 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 90483 4750 RELEDATETA True NCI_RA007_Epitope_Rep4 1133.52004647841 1133.51894993586 24.703 2 0.16869336928248901 0.0006531678641410843 0.0019649910302860737 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 45235 8593 IPTISTQLK True H1975_Epitope_Rep1 999.59644632431 999.59534993586 37.981 2 0.1686909921762741 0.0006531678641410843 0.0019650987623862715 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 83298 10797 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.47107496793 46.559 1 0.1686842743899745 0.0006531678641410843 0.0019654032490536277 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 97643 10800 SEFTKIITP True NCI_RA007_Epitope_Rep5 1034.5648118428599 1034.56370993586 48.176 2 0.16866169753774518 0.0006531678641410843 0.001966426900798575 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 28496 11212 FSDVNMQEY True H1975_Epitope_Rep2 1131.4542754177098 1131.4531699358602 48.168 2 0.16865554135185434 0.0006531678641410843 0.001966706119490158 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 103930 17744 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51289496793 73.05 1 0.16865181335389137 0.0006531678641410843 0.001966875225070531 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 29028 13026 FTEQWTDGY True H1975_Epitope_Rep1 1145.4665543535698 1145.46544993586 55.187 2 0.1686406630555763 0.0006531678641410843 0.001967381100151754 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 54650 16127 KYLNSVQYI True PC9_epitope_Rep5 1126.60225998074 1126.60116993586 67.023 2 0.16863815841270746 0.0006531678641410843 0.0019674947505619374 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'RALGPS2|p.D401Mfs*5|1|0.09|ENSG00000116191|chr1:178889650-178889650|G/-|frameshift_variant', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 76954 9759 NRDTQETLL True PC9_epitope_Rep1 1088.5462016566 1088.5451099358602 42.397 2 0.16863794342803753 0.0006531678641410843 0.0019675045059896036 ['nc|ENSG00000197905|Q15561-2|TEAD4', 'nc|ENSG00000187079|P28347-2|TEAD1', 'nc|ENSG00000197905|Q15561-3|TEAD4', 'ENSG00000187079|ENST00000527636|TEAD1', 'ENSG00000197905|ENST00000359864|TEAD4'] 28497 11116 FSDVNMQEY True H1975_Epitope_Rep3 1131.4542754177098 1131.4531699358602 47.853 2 0.16863314191610057 0.0006531678641410843 0.001967722398329027 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 27177 21459 FLLGPRLVLA True PC9_epitope_Rep5 1097.6961007959299 1097.69500993586 87.584 2 0.1686245841160724 0.0006531678641410843 0.001968110810652801 ['ENSG00000170348|ENST00000303575|TMED10'] 130947 2757 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57308490379 14.633 3 0.16859964494283486 0.0006531678641410843 0.001969243160725906 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 41057 4729 HTLNQIDSVK True NCI_RA007_Epitope_Rep4 1153.6091362663299 1153.60802993586 24.62 2 0.16859930462540842 0.0006531678641410843 0.0019692586171657844 ['CON__P12763'] 62708 18243 LLLNNDNLLR True PC9_epitope_Rep2 1196.6877209401998 1196.68662993586 75.491 2 0.1685974615380973 0.0006531678641410843 0.001969342328088035 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 132769 16332 VVITEKGISDL True PC9_epitope_Rep4 1172.66525416012 1172.66414993586 70.784 2 0.16859738916764686 0.0006531678641410843 0.001969345615143919 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 106288 7990 STFNQVVLK True NCI_RA007_Epitope_Rep3 1034.5760452328998 1034.57494993586 38.526 2 0.16859381979700208 0.0006531678641410843 0.0019695077422763486 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 104366 20668 SQITPHAIIFL True PC9_epitope_Rep2 1238.7023083751799 1238.70120993586 84.936 2 0.16858760630665834 0.0006531678641410843 0.001969790001852098 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 11819 15286 DHFNAMTSL True PC9_epitope_Rep4 1034.4491304676199 1034.4480299358602 66.727 2 0.1685828546545869 0.0006531678641410843 0.0019700058819539213 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 1094 19769 AEALPLPLLP True H1975_Epitope_Rep2 1032.6219327961599 1032.62082993586 82.016 2 0.16857975566399777 0.0006531678641410843 0.00197014669002938 ['ENST00000256190.12_1_11:10315695-10315752:-|nuORF'] 24445 9232 FADLSEAANR True PC9_epitope_Rep4 1092.5199869087598 1092.5188899358602 43.109 2 0.1685793081033362 0.0006531678641410843 0.0019701670265652492 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 98236 6429 SEVATLTAAGK True NCI_RA007_Epitope_Rep1 1046.5607890915799 1046.5596899358602 29.032 2 0.16857802539767164 0.0006531678641410843 0.0019702253120951986 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 88982 20112 QVIPQFQTV True PC9_epitope_Rep1 1058.5760452328998 1058.57494993586 82.191 2 0.16857687444852007 0.0006531678641410843 0.0019702776121404055 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 1463 11820 AEEGTAKLIEF True H1975_Epitope_Rep2 1206.6132185872596 1206.6121299358601 50.542 2 0.16855551532999008 0.0006531678641410843 0.001971248439508351 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000561014.1_1_15:49531438-49610381:+|nuORF', 'ENST00000560119.5_1_15:49527865-49611209:+|nuORF'] 47994 20311 IYKPVTDFF True PC9_epitope_Rep5 1128.5855472874398 1128.5844499358602 83.17 2 0.1685554446165448 0.0006531678641410843 0.0019712516544124342 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000472420.5_1_2:44123526-44126707:-|nuORF'] 96123 14432 RYNPNLNTW True PC9_epitope_Rep1 1176.5676058075198 1176.56650993586 60.336 2 0.1685547603797 0.0006531678641410843 0.001971282762711166 ['ENSG00000178502|ENST00000319121|KLHL11'] 21208 10406 ERDPATYNI True PC9_epitope_Rep3 1077.5090878718902 1077.50798993586 44.966 2 0.16855069385025356 0.0006531678641410843 0.0019714676544567403 ['ENSG00000138246|ENST00000260818|DNAJC13'] 110005 5293 TEINSQRIAA True H1975_Epitope_Rep3 1101.5778361380499 1101.5767299358602 25.439 2 0.1685488060954989 0.0006531678641410843 0.001971553490363421 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 41557 19698 HYSPIYLSF True PC9_epitope_Rep4 1125.5494961318898 1125.54838993586 83.889 2 0.1685391070889554 0.0006531678641410843 0.001971994561579962 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 21027 14917 EQSRIITVL True PC9_epitope_Rep4 1057.6131590176099 1057.61206993586 65.319 2 0.1685263591603578 0.0006531678641410843 0.001972574435430626 ['ENSG00000158006|ENST00000374282|PAFAH2'] 84934 15327 QEEDFVLQV True H1975_Epitope_Rep3 1105.5291546101298 1105.52804993586 64.366 2 0.16851951572942414 0.0006531678641410843 0.0019728857976561705 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 38823 14366 HHALPITDL True PC9_epitope_Rep5 1015.54507945779 1015.5439899358599 60.259 2 0.1685183690139824 0.0006531678641410843 0.0019729379756908607 ['ENSG00000065268|ENST00000585809|WDR18'] 134831 21319 VYVDDIYVI True PC9_epitope_Rep4 1097.56447748969 1097.5633899358602 90.17 2 0.16851801366289576 0.0006531678641410843 0.0019729541452145885 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 21178 6746 ERDM[Oxidation]SNVSL True PC9_epitope_Rep1 1065.47607387189 1065.4749699358601 30.754 2 0.1685144596431975 0.0006531678641410843 0.0019731158708971865 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 135104 12469 WEEEFIERC True H1975_Epitope_Rep2 1239.5230236838697 1239.52192993586 53.051 2 0.16851282246065052 0.0006531678641410843 0.0019731903753571383 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 76445 15101 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 63.343 2 0.16851013613073 0.0006531678641410843 0.00197331263022781 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 53819 10600 KTEIMSPLY True H1975_Epitope_Rep2 1080.5525329069999 1080.5514299358601 45.795 2 0.16850377469689362 0.0006531678641410843 0.0019736021692851767 ['ENSG00000108592|ENST00000427159|FTSJ3', 'ENST00000583202.5_1_17:61898213-61899202:-|nuORF'] 84412 15557 QADLINELY True H1975_Epitope_Rep2 1077.53423999057 1077.53367496793 64.996 1 0.1684964059167328 0.0006531678641410843 0.00197393761057247 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 47916 8602 IYIKQIKTF True NCI_RA007_Epitope_Rep3 1152.6906810623198 1152.6890249037901 40.912 3 0.16849347855289176 0.0006531678641410843 0.001974070885726382 ['ENSG00000103479|ENST00000262133|RBL2'] 49527 9832 KFIDTTSKF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 43.155 2 0.16849027062100147 0.0006531678641410843 0.001974216944738548 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 17933 8323 EIAQEFKTDLR True NCI_RA007_Epitope_Rep5 1348.6986795467199 1348.6970249037902 38.69 3 0.16848920894441938 0.0006531678641410843 0.0019742652858737073 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 4703 16515 ALATLIHQV True PC9_epitope_Rep5 964.5705659296401 964.56946993586 68.525 2 0.16848883636001816 0.0006531678641410843 0.0019742822509750814 ['ENSG00000111652|ENST00000543155|COPS7A'] 118958 12601 VADTVARVL True PC9_epitope_Rep5 942.5498304850598 942.54872993586 53.47 2 0.16848843432714067 0.0006531678641410843 0.0019743005571345343 ['ENSG00000145632|ENST00000274289|PLK2'] 75598 13517 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.50207496793 57.114 1 0.1684880526310611 0.0006531678641410843 0.001974317937435616 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 23830 17333 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.6640899358601 74.677 2 0.16848665629880893 0.0006531678641410843 0.00197438151988756 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 10097 18663 AYTPFHAVL True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 76.81 2 0.16848324563197117 0.0006531678641410843 0.0019745368343432575 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 30373 8598 GADPRAISL True H1975_Epitope_Rep2 898.4872302284999 898.48612993586 38.026 2 0.1684826775586067 0.0006531678641410843 0.0019745627043735066 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 45839 15663 ISDLSINSLY True H1975_Epitope_Rep2 1123.57610480255 1123.5750099358602 65.405 2 0.16848146689887478 0.0006531678641410843 0.0019746178388832013 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 73258 5172 MSEEHTAVY True H1975_Epitope_Rep2 1065.44371073401 1065.4426099358602 24.97 2 0.16847914215037033 0.0006531678641410843 0.0019747237142931874 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 45336 9203 IQDDAVHTL True PC9_epitope_Rep2 1010.50327421546 1010.50216993586 40.74 2 0.16847189845343727 0.0006531678641410843 0.001975053648487563 ['ENSG00000115816|ENST00000234170|CEBPZ'] 87896 8299 QRIDSDDAL True PC9_epitope_Rep5 1031.4883524273098 1031.48724993586 36.861 2 0.16845721867223115 0.0006531678641410843 0.001975722448779986 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 68086 12685 LTDLYSPEY True H1975_Epitope_Rep3 1099.50735653639 1099.50624993586 54.003 2 0.16845464479562663 0.0006531678641410843 0.0019758397360869428 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 55814 6224 LAPEYEAAATR True H1975_Epitope_Rep3 1190.59315184902 1190.5920499358601 28.953 2 0.16845298518934448 0.0006531678641410843 0.0019759153652975712 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 95892 22169 RYLDLFTNF True PC9_epitope_Rep1 1187.59750895347 1187.59640993586 90.09 2 0.16844551818339762 0.0006531678641410843 0.0019762556768637674 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.Y111*|1|0.1|ENSG00000100196|chr22:38479732-38479733|AC/-|frameshift_variant'] 85816 14798 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 61.741 2 0.16843295426632035 0.0006531678641410843 0.001976828414349142 ['ENSG00000085872|ENST00000546361|CHERP'] 95267 15218 RVPDGMVGL True PC9_epitope_Rep5 942.4956867372199 942.49458993586 63.546 2 0.1684250494964171 0.0006531678641410843 0.0019771888454887345 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 65342 17578 LRDGQILEL True PC9_epitope_Rep2 1055.59750895347 1055.59640993586 72.891 2 0.16842504321084922 0.0006531678641410843 0.001977189132115814 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 49894 20807 KIIDEDGLLNL True PC9_epitope_Rep3 1241.68671788069 1241.68562993586 85.306 2 0.1684204043091941 0.0006531678641410843 0.0019774006811907486 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 42948 14865 IESLIAVFQK True NCI_RA007_Epitope_Rep1 1146.6648602373 1146.66376993586 61.88 2 0.16841741383994357 0.0006531678641410843 0.0019775370683616715 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 104274 16508 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.57494993586 68.74 2 0.16841279934373246 0.0006531678641410843 0.0019777475414464135 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 107185 16277 SVINEINKI True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 67.603 2 0.16840933807048492 0.0006531678641410843 0.0019779054292593337 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 7527 8960 ASDRNIVLY True H1975_Epitope_Rep2 1049.5505587610498 1049.54946993586 39.419 2 0.16840928767056845 0.0006531678641410843 0.001977907728371341 ['ENSG00000164934|ENST00000612750|DCAF13'] 63020 16503 LLPSRQFGF True PC9_epitope_Rep6 1063.5814649665099 1063.58036993586 75.909 2 0.16840727425541108 0.0006531678641410843 0.001977999577276518 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 72289 9556 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep3 983.4269984211501 983.42644496793 41.765 1 0.1684016219599147 0.0006531678641410843 0.0019782574491084737 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 139930 12066 YQAEHLLQT True PC9_epitope_Rep5 1101.5454733806098 1101.54436993586 51.407 2 0.16840150725189418 0.0006531678641410843 0.0019782626827228368 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ADAM8|p.Q214Rfs*17|1|0.52|ENSG00000151651|chr10:133272862-133272862|T/-|frameshift_variant', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 141952 19094 YVIDPIKGLKL True PC9_epitope_Rep4 1257.7696596590097 1257.7680149037901 81.536 3 0.16839022653342836 0.0006531678641410843 0.0019787774391451214 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 140745 11143 YSDDNPYYNY True H1975_Epitope_Rep1 1312.48841199696 1312.4878749679299 47.83 1 0.16838795576828464 0.0006531678641410843 0.001978881073824724 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 45856 8601 ISDPGVQGY True H1975_Epitope_Rep3 934.43961132974 934.4390649679301 38.075 1 0.1683852552925265 0.0006531678641410843 0.001979004326987758 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 137497 6108 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 28.563 2 0.16838208591901016 0.0006531678641410843 0.001979148991036748 ['ENSG00000127184|ENST00000247655|COX7C'] 105834 5829 SSLNLRET True NCI_RA007_Epitope_Rep1 918.47705946762 918.47596993586 26.727 2 0.16836787065867362 0.0006531678641410843 0.001979797967713168 ['ENSG00000026025|ENST00000544301|VIM'] 92862 9726 RPFEDQTSL True PC9_epitope_Rep6 1091.52473793603 1091.52364993586 47.817 2 0.1683651734545157 0.0006531678641410843 0.0019799211285985666 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 132931 6461 VVNFGPGPAK True H1975_Epitope_Rep3 984.5392658013598 984.53816993586 29.824 2 0.16836020686759948 0.0006531678641410843 0.0019801479350528063 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 22407 4782 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56219490379 23.482 3 0.1683540650016892 0.0006531678641410843 0.0019804284482774223 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 126056 5581 VLEEGSVEAR True NCI_RA007_Epitope_Rep2 1087.5509526838698 1087.54984993586 26.325 2 0.16835229174568267 0.0006531678641410843 0.001980509444375023 ['ENSG00000007080|ENST00000445755|CCDC124'] 90991 16975 RFEEAHFTF True PC9_epitope_Rep3 1182.5458077337796 1182.54415490379 70.454 3 0.1683493272211942 0.0006531678641410843 0.0019806448608263257 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 117233 14399 TVLQKMNEI True PC9_epitope_Rep3 1074.57433098074 1074.5732299358601 60.483 2 0.16833715042599862 0.0006531678641410843 0.0019812011815395253 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.A926S|1|0.16|ENSG00000196878|chr1:209618585-209618585|C/A|missense_variant'] 25352 8877 FEADPPGQV True H1975_Epitope_Rep2 958.4396113297399 958.43850993586 39.115 2 0.16833494494890977 0.0006531678641410843 0.0019813019597904108 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 107873 19826 SVVKVLTEL True PC9_epitope_Rep1 986.6011973515799 986.60010993586 81.075 2 0.1683267443463674 0.0006531678641410843 0.0019816767274896327 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 49930 19992 KILDYEVTL True PC9_epitope_Rep5 1092.6066766548402 1092.60556993586 81.954 2 0.16832447554098218 0.0006531678641410843 0.0019817804244610247 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'IL6ST-ANKRD55|1|fusion', 'IL6ST-ANKRD55|2|fusion', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF', 'ENST00000506241.1_1_5:55251841-55256299:-|nuORF'] 44085 21505 IIMLEALERV True PC9_epitope_Rep3 1185.67913040245 1185.6780299358602 88.013 2 0.16831278184219586 0.0006531678641410843 0.0019823149773341917 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 78601 19653 NYSNIRFQF True PC9_epitope_Rep3 1187.57235683479 1187.5712499358601 80.831 2 0.16831246189739743 0.0006531678641410843 0.001982329604965064 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 21344 19324 ERFNVPVSL True PC9_epitope_Rep1 1059.5712942056298 1059.57018993586 79.136 2 0.16831114268037978 0.0006531678641410843 0.0019823899196958626 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 6735 10238 AQASDLEKI True PC9_epitope_Rep1 973.50802524273 973.50692993586 44.261 2 0.16830843852288255 0.0006531678641410843 0.001982513559777662 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 43356 6465 IGAEVYHNLK True NCI_RA007_Epitope_Rep2 1142.60840799034 1142.6067749037902 29.756 3 0.16830107247972034 0.0006531678641410843 0.00198285039073606 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 45032 19387 IPFWRNTAV True PC9_epitope_Rep5 1102.59236400338 1102.59126993586 79.618 2 0.16829595401865438 0.0006531678641410843 0.0019830844790202115 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3'] 115557 8997 TRSPVKVTL True PC9_epitope_Rep1 999.60767971435 999.60658993586 39.454 2 0.1682950728506819 0.0006531678641410843 0.001983124781245709 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 10050 13542 AYSRVQYQF True PC9_epitope_Rep1 1160.5614577979202 1160.56036993586 56.945 2 0.16829482324948322 0.0006531678641410843 0.001983136197474284 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 33140 13937 GISRQGIIAV True PC9_epitope_Rep5 1012.6029286870798 1012.60182993586 58.63 2 0.16829473209364842 0.0006531678641410843 0.0019831403667648984 ['ENSG00000005100|ENST00000225296|DHX33'] 24077 11825 EYPDRIMNTF True NCI_RA007_Epitope_Rep3 1284.5808729131597 1284.5797699358602 53.632 2 0.16829392178838565 0.0006531678641410843 0.0019831774289371766 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 125280 15537 VILPTVHEV True PC9_epitope_Rep2 1005.5858816406101 1005.58478993586 65.035 2 0.16829164001675928 0.0006531678641410843 0.00198328179754106 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 41461 15446 HYKPTPLYF True PC9_epitope_Rep5 1164.59678067748 1164.59568993586 64.422 2 0.1682854629755021 0.0006531678641410843 0.0019835643639743066 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 35250 7581 GRDENSVEL True PC9_epitope_Rep1 1017.4727023631699 1017.47160993586 33.98 2 0.16828157746994457 0.0006531678641410843 0.001983742125595895 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 3823 12712 AGVLAHLEEER True PC9_epitope_Rep3 1222.6305999868998 1222.6289549037901 53.919 3 0.16827661442612385 0.0006531678641410843 0.0019839692076946834 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 88720 12966 QTHSVFVNV True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 54.883 2 0.16827391344971976 0.0006531678641410843 0.0019840928007212343 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 134110 20480 VYKVPPFTF True PC9_epitope_Rep5 1096.59571804832 1096.5946299358602 83.815 2 0.16827162281018757 0.0006531678641410843 0.001984197623321995 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 49338 9445 KESDIVLYA True H1975_Epitope_Rep1 1036.5440763982797 1036.5429699358601 41.245 2 0.168263575047498 0.0006531678641410843 0.001984565943171429 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 124937 14492 VHSEQVFAL True PC9_epitope_Rep4 1028.5290950404797 1028.5279899358602 63.655 2 0.16825932494021206 0.0006531678641410843 0.001984760484309952 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 60601 7825 LHHDDPEVL True PC9_epitope_Rep5 1073.51417325233 1073.5130699358601 35.043 2 0.16825908223674915 0.0006531678641410843 0.0019847715942070483 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 116254 17419 TTDFIYQLY True H1975_Epitope_Rep2 1162.55464108198 1162.5540749679299 72.294 1 0.16821424918217398 0.0006531678641410843 0.0019868249215343236 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 49453 13474 KEYFGIVSV True NCI_RA007_Epitope_Rep4 1040.5542471591598 1040.5531499358601 59.033 2 0.16820652827532934 0.0006531678641410843 0.0019871787488703703 ['ENSG00000055211|ENST00000367419|GINM1'] 95400 13002 RWFDKSFTF True NCI_RA007_Epitope_Rep3 1232.59784330664 1232.59674993586 58.416 2 0.1682007711225101 0.0006531678641410843 0.001987442623924776 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 89332 21205 QWPPDPPLHF True PC9_epitope_Rep5 1232.59784330664 1232.59674993586 86.612 2 0.1681990574895168 0.0006531678641410843 0.0019875211738566204 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 3267 4966 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 24.469 2 0.16819385404220866 0.0006531678641410843 0.0019877597097864865 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 107016 10985 SVFGTMPLK True NCI_RA007_Epitope_Rep4 978.5208388558999 978.51974993586 49.122 2 0.16819130708255442 0.0006531678641410843 0.001987876477702324 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 74976 18388 NHQDVAGVFAL True PC9_epitope_Rep4 1169.58292151849 1169.58182993586 78.795 2 0.16818725393969755 0.0006531678641410843 0.0019880623122404927 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 7952 5807 ATATGTEILK True NCI_RA007_Epitope_Rep4 1003.5549754351499 1003.55386993586 28.961 2 0.16818410841465475 0.0006531678641410843 0.00198820654493766 ['ENST00000562757.5_1_16:66857380-66864856:-|nuORF', 'ENST00000563419.5_1_16:66858748-66864862:-|nuORF', 'ENST00000569963.1_1_16:66860370-66864856:-|nuORF', 'ENST00000564040.6_1_16:66857135-66864856:-|nuORF', 'ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1'] 88753 5042 QTMSDTTFK True NCI_RA007_Epitope_Rep3 1057.47501086229 1057.47390993586 26.827 2 0.16818312372837912 0.0006531678641410843 0.0019882516982016704 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF'] 83313 16919 PTDYADIMMGY True H1975_Epitope_Rep2 1275.51516142211 1275.51406993586 70.326 2 0.16818238327329066 0.0006531678641410843 0.0019882856528023775 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 26221 10499 FHDNSGDVF True PC9_epitope_Rep4 1036.4250238947598 1036.42392993586 48.105 2 0.16818216703127542 0.0006531678641410843 0.001988295568990963 ['ENSG00000132182|ENST00000254508|NUP210'] 13252 10549 DLSTIEPLK True H1975_Epitope_Rep1 1014.5597264624199 1014.55862993586 45.531 2 0.16818004532491512 0.0006531678641410843 0.001988392866491992 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENSG00000139223|ENST00000266594|ANP32D', 'nc|ENSG00000248546|O43423|ANP32CP'] 4346 14592 AILDYLITK True NCI_RA007_Epitope_Rep5 1048.61684741572 1048.61574993586 62.797 2 0.16817379537730034 0.0006531678641410843 0.0019886795051202604 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 114963 19195 TQVTALIKL True PC9_epitope_Rep5 985.61718176889 985.61608993586 78.873 2 0.1681736968953553 0.0006531678641410843 0.001988684022085561 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 47747 21109 IYEIIDNSQGF True PC9_epitope_Rep3 1297.6190322436898 1297.61792993586 86.477 2 0.16816923780654808 0.0006531678641410843 0.0019888885530595798 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 74005 14320 NDEELNKLLGK True PC9_epitope_Rep3 1271.6721304457099 1271.67049490379 60.169 3 0.16816857614829187 0.0006531678641410843 0.001988918904013757 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 134764 12809 VYTTMAEHF True PC9_epitope_Rep4 1097.48518162317 1097.48408993586 57.13 2 0.16816817594408148 0.0006531678641410843 0.001988937262023032 ['ENSG00000117472|ENST00000372003|TSPAN1'] 54719 20906 KYMDINFDF True PC9_epitope_Rep2 1191.52704643515 1191.5259499358601 85.86 2 0.16816595285470695 0.0006531678641410843 0.001989039241784998 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 95279 14230 RVPKTLVLV True PC9_epitope_Rep5 1023.6804507317898 1023.6793499358599 59.741 2 0.16816085953627224 0.0006531678641410843 0.0019892729072588673 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 46310 11377 ISQIVSSITAS True H1975_Epitope_Rep1 1104.60265390356 1104.60154993586 48.74 2 0.16815129418773941 0.0006531678641410843 0.0019897118096411435 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 35255 7577 GRDENSVEL True PC9_epitope_Rep3 1017.4727023631699 1017.47160993586 34.145 2 0.16814966129211 0.0006531678641410843 0.0019897867441135246 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 95783 20472 RYIDRIHIFF True PC9_epitope_Rep3 1378.7509899031 1378.74934490379 84.003 3 0.1681451226265383 0.0006531678641410843 0.001989995040781205 ['ENSG00000174231|ENST00000304992|PRPF8'] 54824 17247 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 71.217 2 0.1681428913181837 0.0006531678641410843 0.00199009745202465 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 70042 11278 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6228749679299 48.358 1 0.1681420178406788 0.0006531678641410843 0.0019901375438032627 ['CON__P02769'] 11777 11270 DHDITSQL True PC9_epitope_Rep5 927.42977492203 927.42866993586 48.342 2 0.1681375445250314 0.0006531678641410843 0.0019903428773569267 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 72953 13235 MQDKSSYLL True PC9_epitope_Rep1 1083.52704643515 1083.5259499358601 55.774 2 0.16812947857633107 0.0006531678641410843 0.0019907131730330947 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9', 'DOCK9|p.D312Efs*18|1|0.3|ENSG00000088387|chr13:98914352-98914352|A/-|frameshift_variant'] 5370 10088 ALSGHLETV True PC9_epitope_Rep1 925.48689587533 925.48578993586 43.675 2 0.16811433126280204 0.0006531678641410843 0.0019914087498041372 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 99369 15262 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep3 1277.7343370957499 1277.7332299358602 63.855 2 0.16810959798413339 0.0006531678641410843 0.0019916261555927273 ['ENSG00000100632|ENST00000557016|ERH'] 130218 9668 VSEVSSLNY True H1975_Epitope_Rep1 996.4763907612801 996.47584496793 42.114 1 0.16810952204043467 0.0006531678641410843 0.0019916296439813526 ['ENSG00000117000|ENST00000372771|RLF'] 134261 19133 VYNENLVHMI True PC9_epitope_Rep5 1230.60669373818 1230.60558993586 78.629 2 0.168108893644739 0.0006531678641410843 0.0019916585088673405 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 141151 5447 YSSSRSDLY True H1975_Epitope_Rep3 1076.47745339044 1076.47634993586 26.012 2 0.1681048132090125 0.0006531678641410843 0.00199184595080776 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 17723 12217 EHQAVLQSL True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 51.98 2 0.16810436995762268 0.0006531678641410843 0.001991866313396672 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 92374 18774 RLPETLPSL True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 77.227 2 0.1681025564854822 0.0006531678641410843 0.001991949624920676 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 76512 16644 NQIKEFIYA True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 69.026 2 0.1681003414788176 0.0006531678641410843 0.0019920513878044547 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 35565 10030 GSYDPQQIFK True NCI_RA007_Epitope_Rep3 1181.57168812845 1181.5705899358602 46.545 2 0.16809927567974645 0.0006531678641410843 0.001992100355102207 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 28074 16550 FQTEGKLYL True PC9_epitope_Rep3 1097.5757108797297 1097.57460993586 68.799 2 0.16808961212324133 0.0006531678641410843 0.001992544394527699 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 9506 6823 AVVTQVNKV True PC9_epitope_Rep5 956.5654805492 956.56438993586 31.217 2 0.16807467468894635 0.0006531678641410843 0.0019932309628622647 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 2641 8153 AESIDNPLHEA True H1975_Epitope_Rep2 1194.55168095986 1194.5505899358602 36.31 2 0.16807280024959637 0.0006531678641410843 0.001993317134303603 ['ENSG00000134996|ENST00000346234|OSTF1'] 78302 16551 NYIPRFWTF True NCI_RA007_Epitope_Rep3 1242.6185787512197 1242.61748993586 72.893 2 0.16807123458315343 0.0006531678641410843 0.001993389113739395 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 47882 18577 IYIDRGVVF True PC9_epitope_Rep4 1080.59678067748 1080.59568993586 79.533 2 0.1680633568903736 0.0006531678641410843 0.001993751319650635 ['ENSG00000100109|ENST00000407690|TFIP11', 'nc|ENSG00000100109|Q9UBB9-2|TFIP11'] 44687 15776 ILTERGYSF True PC9_epitope_Rep5 1084.55530978832 1084.5542099358602 65.676 2 0.16805528947193882 0.0006531678641410843 0.0019941223171144836 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 26178 10951 FHDESTQVQL True PC9_epitope_Rep4 1202.5567663402999 1202.5556699358601 49.893 2 0.16804471166114787 0.0006531678641410843 0.001994608864944444 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 1277 4760 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 23.398 2 0.1680423585906223 0.0006531678641410843 0.00199471711533075 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 43661 21365 IHDGFGFML True PC9_epitope_Rep1 1035.48478770035 1035.4836899358602 87.012 2 0.16803880975257487 0.0006531678641410843 0.0019948803867817556 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 135396 21027 WHDSDWIL True PC9_epitope_Rep5 1070.48214484806 1070.48104993586 85.938 2 0.16802992376690754 0.0006531678641410843 0.0019952892631047675 ['ENSG00000107625|ENST00000373585|DDX50'] 110455 8519 TFDSIVM[Oxidation]DPK True H1975_Epitope_Rep1 1167.54817618299 1167.54706993586 37.699 2 0.16802959711160217 0.0006531678641410843 0.0019953042952932363 ['ENSG00000155660|ENST00000652332|PDIA4'] 141287 8520 YTDMESEDY True H1975_Epitope_Rep2 1151.39648575807 1151.39597496793 37.727 1 0.16802624904688407 0.0006531678641410843 0.0019954583747525505 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 21225 8670 ERDPQSPEF True PC9_epitope_Rep1 1103.4883524273098 1103.48724993586 38.189 2 0.16801756555339245 0.0006531678641410843 0.0019958580485223408 ['MSANTD4|p.E277Vfs*13|1|0.06|ENSG00000170903|chr11:106009731-106009743|CCAAGTTCATTTT/-|frameshift_variant', 'ENSG00000170903|ENST00000301919|MSANTD4'] 136975 21242 YAIEVDPVL True PC9_epitope_Rep2 1017.5382627418498 1017.53767496793 87.166 1 0.16801352491619456 0.0006531678641410843 0.0019960440535791405 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 27900 21302 FQDSVFNDL True PC9_epitope_Rep2 1083.48728979815 1083.48618993586 87.402 2 0.16801173149293921 0.0006531678641410843 0.0019961266168540505 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 35528 4150 GSSDVIIHR True NCI_RA007_Epitope_Rep4 982.5195929859399 982.51848993586 22.256 2 0.16800777412931353 0.0006531678641410843 0.001996308812869719 ['PHRF1|p.S867Pfs*46|1|0.14|ENSG00000070047|chr11:608054-608064|CAGCCCGAAGG/-|frameshift_variant', 'ENST00000532550.1_1_11:601671-606691:+|nuORF', 'nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 21697 10862 ERSLNTDVL True PC9_epitope_Rep4 1045.54038800017 1045.53928993586 49.543 2 0.16800753468136395 0.0006531678641410843 0.0019963198375260545 ['ENSG00000140829|ENST00000268482|DHX38', 'ENST00000569935.1_1_16:72137048-72138114:+|nuORF', 'DHX38|p.G697Wfs*16|1|0.29|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant'] 49985 8594 KITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep5 1246.62273800457 1246.6216499358602 39.734 2 0.16800578822692414 0.0006531678641410843 0.0019964002495781153 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 95699 21114 RYFLPPYTF True PC9_epitope_Rep2 1202.6124307416196 1202.61132993586 86.674 2 0.16800494193183044 0.0006531678641410843 0.0019964392167326436 ['ENSG00000023608|ENST00000216294|SNAPC1'] 142549 19459 YYLNDLDRI True PC9_epitope_Rep2 1183.5873381925899 1183.58624993586 80.23 2 0.16800112280139806 0.0006531678641410843 0.0019966150757851544 ['ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1', 'ENSG00000065135|ENST00000369851|GNAI3', 'ENSG00000214415|ENST00000398291|GNAT3'] 71129 20216 LYLPSFFTY True NCI_RA007_Epitope_Rep3 1149.57464825057 1149.57354993586 88.08 2 0.16799990797020262 0.0006531678641410843 0.001996671018222838 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 106823 4046 SVAPSPAVDK True NCI_RA007_Epitope_Rep4 969.51311062317 969.51200993586 21.823 2 0.1679992333966065 0.0006531678641410843 0.0019967020827146085 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 76682 21308 NQSELAVLL True PC9_epitope_Rep2 985.5444107514498 985.54330993586 87.425 2 0.16799679913949764 0.0006531678641410843 0.0019968141856365283 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 32017 12708 GEQLTLPPPP True H1975_Epitope_Rep3 1047.5600608155898 1047.5589699358602 54.092 2 0.1679961773405387 0.0006531678641410843 0.0019968428218626187 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000272391|A8CG34|POM121C', 'POM121C|p.F573Cfs*82|1|0.2|ENSG00000272391|chr7:75422534-75422535|-/C|frameshift_variant', 'POM121C|p.Q618Lfs*51|1|0.06|ENSG00000272391|chr7:75422384-75422399|GGAGGTTTGCCAAACT/-|frameshift_variant', 'nc|ENSG00000205578|A6NF01|POM121B', 'nc|ENSG00000196313|Q96HA1-2|POM121', 'ENSG00000272391|ENST00000615331|POM121C', 'nc|ENSG00000196313|Q96HA1-3|POM121', 'POM121|p.R515Q|1|0.19|ENSG00000196313|chr7:72939949-72939949|G/A|missense_variant'] 54714 15040 KYMDINFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 66.62 2 0.16798062036784603 0.0006531678641410843 0.001997559413799176 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 53795 13182 KTDDLTMVLY True H1975_Epitope_Rep3 1197.59512599497 1197.5940299358601 55.956 2 0.1679745932311221 0.0006531678641410843 0.0019978371074661017 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 16036 7419 EDVFVHQTAIK True NCI_RA007_Epitope_Rep1 1285.6666511424498 1285.66501490379 32.854 3 0.16796681849919853 0.0006531678641410843 0.001998195376673959 ['ENSG00000065978|ENST00000321358|YBX1', 'ENSG00000006047|ENST00000007699|YBX2', 'nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3'] 78064 17234 NVVDVFHAV True PC9_epitope_Rep6 998.51853035678 998.51742993586 78.889 2 0.1679555728041821 0.0006531678641410843 0.001998713705817008 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 104301 19859 SQINKFLYL True PC9_epitope_Rep2 1124.62299542532 1124.62188993586 81.779 2 0.16795401061751355 0.0006531678641410843 0.001998785719728732 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 119237 18905 VALDKVIEI True PC9_epitope_Rep4 998.6011973515799 998.60010993586 80.804 2 0.16795189224440102 0.0006531678641410843 0.0019988833769504313 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 49934 18329 KILPDLNTV True PC9_epitope_Rep1 1011.59644632431 1011.59534993586 75.291 2 0.16795149545670432 0.0006531678641410843 0.001998901669435277 ['ENSG00000142207|ENST00000382751|URB1'] 134478 18636 VYPQYVIEY True PC9_epitope_Rep6 1172.57537652656 1172.57426993586 84.326 2 0.16795019286782595 0.0006531678641410843 0.001998961721837366 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 135205 7825 WESPSPPKP True H1975_Epitope_Rep2 1023.5025459394699 1023.50144993586 35.048 2 0.16794183409123142 0.0006531678641410843 0.001999347123981432 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 142672 15122 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.62334993586 62.987 2 0.16793213561295123 0.0006531678641410843 0.0019997943895302354 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 55050 19484 KYSPFVVSF True PC9_epitope_Rep4 1072.5593325396 1072.55822993586 83.061 2 0.16793178926409577 0.0006531678641410843 0.0019998103639802976 ['ENSG00000086544|ENST00000263370|ITPKC'] 72068 4069 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 20.736 2 0.16792940404813994 0.0006531678641410843 0.001999920379396583 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 73058 14870 MRDPLNRVL True PC9_epitope_Rep1 1112.61244782496 1112.61134993586 62.016 2 0.16792545879370552 0.0006531678641410843 0.002000102363127269 ['ENSG00000008838|ENST00000394128|MED24', 'nc|ENSG00000008838|O75448-2|MED24'] 1111 4794 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.39082993586 23.53 2 0.167923350654243 0.0006531678641410843 0.0020001996125884863 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 140521 13588 YRMDGHIQL True PC9_epitope_Rep5 1131.5495132152298 1131.54840993586 57.289 2 0.16792025634820176 0.0006531678641410843 0.00200034236294056 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 8773 19040 AVDLTLPKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 78.028 2 0.1679192201998238 0.0006531678641410843 0.0020003901660956636 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 23954 17069 EYLLKVNEI True PC9_epitope_Rep6 1119.61757569171 1119.61646993586 78.22 2 0.16791836902155033 0.0006531678641410843 0.002000429436429465 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 106138 10945 STDLQDYTY True H1975_Epitope_Rep1 1104.46113461996 1104.46057496793 47.064 1 0.16791280983845758 0.0006531678641410843 0.0020006859362986912 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 66238 10895 LSEWQKELY True H1975_Epitope_Rep1 1194.5920892198599 1194.59098993586 46.869 2 0.16790867848029978 0.0006531678641410843 0.002000876577845205 ['ENSG00000196453|ENST00000247930|ZNF777'] 96897 8403 SATTSPFFK True NCI_RA007_Epitope_Rep4 984.4916469025999 984.49054993586 39.138 2 0.1678982430739356 0.0006531678641410843 0.0020013582006367953 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 21207 10314 ERDPATYNI True PC9_epitope_Rep3 1077.5090878718902 1077.50798993586 44.618 2 0.16789444886402247 0.0006531678641410843 0.0020015333426301844 ['ENSG00000138246|ENST00000260818|DNAJC13'] 108432 21935 SYLPISPTF True PC9_epitope_Rep1 1023.52769805815 1023.5266099358599 89.19 2 0.1678915488214774 0.0006531678641410843 0.002001667219895233 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 140898 11265 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep3 1177.4849072200898 1177.48380993586 48.434 2 0.16788975287659672 0.0006531678641410843 0.002001750132199688 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 53390 18369 KQVEEIFNL True PC9_epitope_Rep4 1118.5971746003 1118.5960699358602 78.722 2 0.16788531075086058 0.0006531678641410843 0.0020019552238942817 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 26419 20043 FIAKSFYDL True PC9_epitope_Rep3 1102.5698972233 1102.5688099358601 82.345 2 0.16788459501433547 0.0006531678641410843 0.002001988271213837 ['ENSG00000176153|ENST00000389614|GPX2'] 140866 5141 YSDVHNCSY True H1975_Epitope_Rep2 1086.40765957846 1086.40656993586 24.852 2 0.16788032218979446 0.0006531678641410843 0.002002185569405336 ['ENST00000557983.1_1_15:80423514-80429967:+|nuORF', 'nc|ENSG00000086666|Q6FIF0-2|ZFAND6', 'ENSG00000086666|ENST00000261749|ZFAND6'] 24010 11340 EYMKHTRLF True PC9_epitope_Rep5 1223.6121134717898 1223.61100993586 48.616 2 0.16787811309061837 0.0006531678641410843 0.0020022875824532685 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 76063 7657 NMEADPGQY True H1975_Epitope_Rep2 1023.3967605415899 1023.3956699358599 34.406 2 0.1678724217944996 0.0006531678641410843 0.0020025504223344336 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 3277 6325 AGFAGDDAPR True PC9_epitope_Rep3 975.4410083120698 975.43990993586 29.36 2 0.16787236910939515 0.0006531678641410843 0.0020025528556402434 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 12127 14259 DIDEVSSLLR True NCI_RA007_Epitope_Rep1 1145.59281749585 1145.59172993586 59.5 2 0.16786903638148268 0.0006531678641410843 0.002002706786488673 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 77311 10014 NSDPNLHLL True NCI_RA007_Epitope_Rep3 1021.5192586327701 1021.51816993586 46.482 2 0.16786583359845256 0.0006531678641410843 0.0020028547266392224 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 92282 20462 RLLDLENIQI True PC9_epitope_Rep4 1225.70303665117 1225.70192993586 86.851 2 0.16786243951916952 0.0006531678641410843 0.002003011514906668 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 90787 4004 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 21.656 2 0.1678623163123566 0.0006531678641410843 0.0020030172066317895 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 105489 19857 SRYLNEFEEL True PC9_epitope_Rep5 1298.61428121642 1298.6131899358602 81.429 2 0.1678614164083616 0.0006531678641410843 0.002003058779548825 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 35149 8494 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 39.356 2 0.16785734675757688 0.0006531678641410843 0.002003246796217404 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 90078 4731 REAEFTKSIA True NCI_RA007_Epitope_Rep5 1150.59823722946 1150.5971499358602 24.882 2 0.16784970437707333 0.0006531678641410843 0.0020035999196409125 ['ENSG00000118363|ENST00000263672|SPCS2'] 54466 11013 KYGNLSNYL True NCI_RA007_Epitope_Rep4 1070.53965972418 1070.53856993586 49.229 2 0.16784087490524927 0.0006531678641410843 0.002004007971249546 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 55037 8456 KYSLIKGNF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 39.342 2 0.16783589660542672 0.0006531678641410843 0.00200423807864356 ['ENSG00000143546|ENST00000368733|S100A8'] 104051 4001 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 21.628 2 0.16783586747182225 0.0006531678641410843 0.0020042394253372477 ['ENSG00000130935|ENST00000253247|NOL11'] 2460 16084 AEQLMTLISA True H1975_Epitope_Rep2 1075.55834656343 1075.55724993586 67.074 2 0.16782260880125138 0.0006531678641410843 0.002004852398045569 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 54374 12978 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.5338699358601 54.947 2 0.16782145076854207 0.0006531678641410843 0.002004905944927843 ['ENSG00000123975|ENST00000314355|CKS2'] 103403 6292 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 30.807 2 0.1678068462453845 0.0006531678641410843 0.002005581373912315 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 88049 12477 QRQEEAFAL True PC9_epitope_Rep2 1090.5407223533398 1090.5396299358601 53.303 2 0.16779737368618786 0.0006531678641410843 0.0020060195818382594 ['ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'nc|ENSG00000163214|Q6P158-3|DHX57', 'ENST00000479345.2_1_2:39084268-39090579:-|nuORF'] 23678 19710 EYDLIVHQL True PC9_epitope_Rep3 1128.58152453616 1128.5804299358601 81.044 2 0.1677965698588838 0.0006531678641410843 0.0020060567719191345 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 89813 11538 RALPELTKL True PC9_epitope_Rep4 1039.6389798426299 1039.6378899358601 52.144 2 0.16779271907414905 0.0006531678641410843 0.0020062349428803536 ['ENSG00000173801|ENST00000393931|JUP'] 140243 20735 YQYPVIIHL True PC9_epitope_Rep3 1144.6280808057597 1144.6269899358601 85.025 2 0.1677912138859785 0.0006531678641410843 0.0020063045903436463 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 29110 15678 FTLDHVQEI True PC9_epitope_Rep6 1100.55022440788 1100.54912993586 72.515 2 0.16778754358711487 0.0006531678641410843 0.0020064744310773672 ['ENST00000371317.9_1_X:119737922-119739264:+|nuORF'] 38270 8680 HEEIAMATVTA True H1975_Epitope_Rep2 1171.55432381215 1171.5532299358601 38.348 2 0.16778430315268228 0.0006531678641410843 0.0020066243920603857 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 76812 6144 NRAPNTAEL True PC9_epitope_Rep5 984.4988575413599 984.49776993586 28.617 2 0.16778327147537098 0.0006531678641410843 0.0020066721384257085 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 88607 12924 QTDQMVFNAY True H1975_Epitope_Rep3 1215.52302368387 1215.52192993586 54.94 2 0.16777731540292254 0.0006531678641410843 0.0020069478096322855 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 134600 21520 VYSIVPQSW True PC9_epitope_Rep5 1077.54949613189 1077.54838993586 87.812 2 0.16777226424842587 0.0006531678641410843 0.002007181627242204 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 140346 11804 YRDPNTIETL True PC9_epitope_Rep4 1220.60371653272 1220.60260993586 53.172 2 0.1677695859822681 0.0006531678641410843 0.0020073056150583636 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 27793 10210 FQAPRNPTL True PC9_epitope_Rep6 1042.55597849466 1042.55488993586 49.919 2 0.16776800616928014 0.0006531678641410843 0.002007378754608262 ['ENSG00000131746|ENST00000254051|TNS4'] 29726 10925 FVNDIFER True H1975_Epitope_Rep1 1038.5134449763398 1038.5123499358601 46.986 2 0.16776790249856463 0.0006531678641410843 0.002007383554275524 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 12036 16832 DHSPDLYSL True PC9_epitope_Rep2 1045.47163973401 1045.4705499358602 69.993 2 0.167765590014422 0.0006531678641410843 0.002007490618875751 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 32038 13032 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.4912699358601 55.247 2 0.16776242188240434 0.0006531678641410843 0.002007637307979955 ['ENSG00000051523|ENST00000261623|CYBA'] 118154 16488 TYIPVPAKI True PC9_epitope_Rep2 1000.5957180483199 1000.59462993586 68.663 2 0.1677594152122583 0.0006531678641410843 0.002007776531079259 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 12026 16807 DHSIIETL True PC9_epitope_Rep2 926.47091145802 926.46980993586 69.895 2 0.1677575596108026 0.0006531678641410843 0.002007862459052655 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 35394 15212 GSDEPAFMYY True H1975_Epitope_Rep2 1178.45902644498 1178.4579299358602 63.669 2 0.16775678446716577 0.0006531678641410843 0.0020078983549840783 ['ENSG00000155096|ENST00000337198|AZIN1'] 90236 6621 REEEANVVLT True H1975_Epitope_Rep2 1158.5880664685797 1158.58696993586 30.376 2 0.1677559285665162 0.0006531678641410843 0.0020079379914172074 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 142601 16898 YYLTPDGQRF True PC9_epitope_Rep3 1258.59823722946 1258.5971499358602 70.155 2 0.1677445248686762 0.0006531678641410843 0.002008466166992365 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 87795 11476 QRDPNSPLYSV True PC9_epitope_Rep4 1274.62551460646 1274.62440993586 51.904 2 0.16774361498834733 0.0006531678641410843 0.002008508315146458 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF'] 65412 13634 LREPLPATL True PC9_epitope_Rep6 1008.59678067748 1008.59568993586 64.211 2 0.16773728000235927 0.0006531678641410843 0.002008801793603952 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 90074 4619 REAEFTKSIA True NCI_RA007_Epitope_Rep3 1150.59823722946 1150.5971499358602 25.083 2 0.1677290386890051 0.0006531678641410843 0.0020091836499402205 ['ENSG00000118363|ENST00000263672|SPCS2'] 141699 17049 YTVEDIQRL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 70.831 2 0.16772823785854418 0.0006531678641410843 0.0020092207598111926 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 84380 12431 QAADLAYQL True NCI_RA007_Epitope_Rep5 991.4974605590301 991.49636993586 54.473 2 0.1677265191692794 0.0006531678641410843 0.0020093004048711677 ['ENSG00000147113|ENST00000398000|DIPK2B'] 54860 21908 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 89.573 2 0.16771668864327088 0.0006531678641410843 0.0020097560178428467 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 108319 9941 SYISRTNQL True PC9_epitope_Rep5 1080.5563724174801 1080.55526993586 43.212 2 0.1677076808987225 0.0006531678641410843 0.002010173588271446 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 75604 13486 NLDPLTETY True H1975_Epitope_Rep3 1064.50260550912 1064.50207496793 57.15 1 0.16770704495390776 0.0006531678641410843 0.002010203071932062 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 96282 11275 RYQTQPVTL True PC9_epitope_Rep3 1104.5927579261997 1104.5916699358602 48.378 2 0.16770659888496858 0.0006531678641410843 0.0020102237528292384 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 97491 7084 SEELQSVQA True H1975_Epitope_Rep2 989.4665543535699 989.46544993586 32.18 2 0.16770268953985223 0.0006531678641410843 0.002010405009173903 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF', 'ENST00000486527.6_1_2:25016788-25037388:+|nuORF', 'ENST00000498362.1_1_2:25016366-25039516:+|nuORF'] 2009 8481 AEITDEDNSIA True H1975_Epitope_Rep3 1176.5146267448001 1176.51352993586 37.607 2 0.1676982189494515 0.0006531678641410843 0.0020106123076251738 ['ENSG00000161800|ENST00000312377|RACGAP1'] 89537 20280 QYLQDAYSF True PC9_epitope_Rep2 1133.5029398622898 1133.5023749679299 83.428 1 0.16769620817523145 0.0006531678641410843 0.0020107055529242006 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 6369 5360 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 27.337 2 0.1676949105735322 0.0006531678641410843 0.0020107657286881925 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 74962 13140 NHNIYITEV True PC9_epitope_Rep2 1101.54547338061 1101.54436993586 55.815 2 0.16769222364079692 0.0006531678641410843 0.0020108903398536517 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 111476 20471 THVFVIAEL True PC9_epitope_Rep5 1027.5702315764697 1027.56912993586 83.778 2 0.1676823525941222 0.0006531678641410843 0.002011348193065762 ['ENSG00000272047|ENST00000607778|GTF2H5'] 90415 11439 REIFFPETA True H1975_Epitope_Rep1 1108.5553097883198 1108.5542099358602 48.98 2 0.16768219169334064 0.0006531678641410843 0.0020113556570627725 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 53693 4006 KSFDEQNVPK True NCI_RA007_Epitope_Rep5 1190.59315184902 1190.59150490379 21.803 3 0.16767332478674116 0.0006531678641410843 0.0020117670252023756 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 131129 17111 VTEGLTDVILY True H1975_Epitope_Rep2 1221.64926974281 1221.64816993586 71.091 2 0.16767153438781962 0.0006531678641410843 0.0020118500985481106 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 105026 14075 SRDLSSQLL True PC9_epitope_Rep5 1017.54547338061 1017.54436993586 59.153 2 0.167667365397494 0.0006531678641410843 0.002012043550282928 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 94985 6731 RTQGLMIMK True NCI_RA007_Epitope_Rep4 1076.5834561957997 1076.58234993586 32.513 2 0.1676672161889198 0.0006531678641410843 0.002012050474284358 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 100391 12484 SKVSILESL True NCI_RA007_Epitope_Rep1 974.56481184286 974.56370993586 52.537 2 0.16766355578951722 0.0006531678641410843 0.002012220342030495 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 35675 7654 GTEFGGSIYQK True NCI_RA007_Epitope_Rep4 1185.56660274801 1185.56550993586 36.095 2 0.1676629368903381 0.0006531678641410843 0.0020122490646329746 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 90286 9424 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 41.217 2 0.1676619904987696 0.0006531678641410843 0.0020122929866810573 ['ENSG00000130255|ENST00000347512|RPL36'] 98060 8426 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 37.362 1 0.16765808682212358 0.0006531678641410843 0.002012474166511239 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 17784 18264 EHSLPTLGL True PC9_epitope_Rep5 965.51819600361 965.5176449679301 75.267 1 0.16765324331189124 0.0006531678641410843 0.0020126989891509975 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 3264 4857 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.43990993586 25.374 2 0.16765139679761884 0.0006531678641410843 0.002012784705960202 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 67288 6659 LSRSVLFTK True NCI_RA007_Epitope_Rep5 1049.62332977849 1049.62222993586 32.283 2 0.16762902084889053 0.0006531678641410843 0.002013823707295664 ['ENSG00000142556|ENST00000270649|ZNF614'] 18805 9180 ELDHTVSMQY True H1975_Epitope_Rep2 1221.53358836757 1221.5324899358602 40.265 2 0.16762320136530331 0.0006531678641410843 0.002014094016170109 ['nc|ENSG00000182541|P53671-2|LIMK2', 'ENSG00000182541|ENST00000331728|LIMK2'] 28541 9867 FSENSENISY True H1975_Epitope_Rep2 1188.4934973774 1188.49240993586 42.94 2 0.16760499086228928 0.0006531678641410843 0.0020149401092685215 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 134917 15562 VYVVGTAHF True PC9_epitope_Rep5 991.5127167003499 991.51160993586 64.869 2 0.16760421033993894 0.0006531678641410843 0.0020149763816996536 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 68331 16012 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.52277496793 67.047 1 0.16760404253041755 0.0006531678641410843 0.0020149841802282607 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 97319 5200 SEAPGQRALP True H1975_Epitope_Rep3 1024.5301576696397 1024.5290699358602 25.092 2 0.1676017086643826 0.0006531678641410843 0.002015092643955351 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 40501 11237 HRDSGILGL True PC9_epitope_Rep4 966.5246783663799 966.52358993586 50.998 2 0.1675955449305819 0.0006531678641410843 0.0020153791244339678 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 54560 5388 KYISKPENL True NCI_RA007_Epitope_Rep4 1090.60225998074 1090.60116993586 27.294 2 0.1675935892915495 0.0006531678641410843 0.0020154700279163065 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 140545 4792 YRPGTVALR True NCI_RA007_Epitope_Rep5 1031.5876129761098 1031.58650993586 25.118 2 0.1675854249165652 0.0006531678641410843 0.0020158495748195744 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 96038 16019 RYLPTGSFPFL True NCI_RA007_Epitope_Rep3 1296.6866583110398 1296.68556993586 70.69 2 0.16757858508494305 0.0006531678641410843 0.002016167601140987 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 140374 11779 YRDPYTGQSV True PC9_epitope_Rep5 1184.5462016566 1184.5451099358602 50.306 2 0.1675704970208787 0.0006531678641410843 0.0020165437302990703 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 37894 18569 GYSEHFVEF True PC9_epitope_Rep5 1113.47672511445 1113.47562993586 76.45 2 0.1675699303868235 0.0006531678641410843 0.0020165700838072564 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 180 10708 AAEEGLREL True PC9_epitope_Rep5 986.5032742154599 986.50216993586 46.177 2 0.16755897671562037 0.0006531678641410843 0.0020170795943368182 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 5387 15288 ALSKEGIVAL True PC9_epitope_Rep5 999.5964463243098 999.59534993586 63.814 2 0.16755589086408673 0.0006531678641410843 0.0020172231561067636 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 115898 11849 TSETPDYLLKY True H1975_Epitope_Rep3 1328.6499980188 1328.64890993586 50.725 2 0.16755092046770534 0.0006531678641410843 0.002017454413246296 ['ENSG00000105656|ENST00000262809|ELL'] 77006 10590 NRHEGVFKF True PC9_epitope_Rep5 1132.5777765684 1132.57612490379 45.723 3 0.16754488107635598 0.0006531678641410843 0.0020177354430877077 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 84199 20999 PYLDKFFTL True PC9_epitope_Rep4 1142.6011973515801 1142.60010993586 88.934 2 0.16754318225854328 0.0006531678641410843 0.0020178145009063096 ['ENSG00000130158|ENST00000294618|DOCK6'] 71454 21363 LYTPVLIRF True PC9_epitope_Rep1 1120.66446631448 1120.6633699358601 87.004 2 0.1675422076240101 0.0006531678641410843 0.0020178598588341287 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 14329 4749 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 22.553 2 0.16754023946122984 0.0006531678641410843 0.0020179514570813867 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 48232 14561 IYQGRLWAF True NCI_RA007_Epitope_Rep4 1152.60801406752 1152.6069099358601 63.384 2 0.16752943458041886 0.0006531678641410843 0.0020184543900455573 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 104784 20756 SQYEEQFVTL True PC9_epitope_Rep5 1242.5768330785397 1242.5757299358602 84.89 2 0.167527635994701 0.0006531678641410843 0.002018538120680172 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 85834 6260 QHEGGVQEL True PC9_epitope_Rep1 995.46722305991 995.46612993586 28.893 2 0.16751871990887213 0.0006531678641410843 0.0020189532478378925 ['ENSG00000090273|ENST00000321265|NUDC'] 105740 21265 SSFPRFYFV True PC9_epitope_Rep5 1148.5654805492 1148.5643899358602 86.846 2 0.16751565505433777 0.0006531678641410843 0.002019095965188749 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 94958 10896 RTLAEIAKV True PC9_epitope_Rep5 999.6076797143498 999.60658993586 46.899 2 0.1675090202756258 0.0006531678641410843 0.0020194049534144787 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 125455 15001 VIVEPLEQL True NCI_RA007_Epitope_Rep3 1038.5961119711399 1038.5950099358602 66.469 2 0.16750671070817244 0.0006531678641410843 0.002019512523356466 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 141334 8831 YTDSYTDTY True H1975_Epitope_Rep3 1127.42950013851 1127.42897496793 38.975 1 0.16750381439516557 0.0006531678641410843 0.0020196474295382863 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 9108 19685 AVIPRLVQL True PC9_epitope_Rep2 1007.64915060351 1007.64804993586 81.104 2 0.16749659259996205 0.0006531678641410843 0.0020199838498428063 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 110837 21201 TGPTRFFLF True PC9_epitope_Rep2 1084.5705659296398 1084.56946993586 87.007 2 0.16749424285109712 0.0006531678641410843 0.002020093322690694 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 96247 15415 RYQDIIHSI True PC9_epitope_Rep3 1143.6036569630699 1143.60254993586 64.448 2 0.16749376034316946 0.0006531678641410843 0.0020201158030684987 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 78440 17774 NYLSIFRKF True PC9_epitope_Rep6 1186.6498788795 1186.6482449037899 81.002 3 0.16748982748714125 0.0006531678641410843 0.002020299046879022 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 127095 9673 VLTEIIASR True NCI_RA007_Epitope_Rep1 1000.5916952970399 1000.59058993586 41.625 2 0.16748397515697128 0.0006531678641410843 0.002020571755641648 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 112430 8555 TLDDESLKY True H1975_Epitope_Rep1 1082.5131701928199 1082.5120699358602 37.833 2 0.1674812179847658 0.0006531678641410843 0.002020700247995055 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 16007 5949 EDSNLTLQEK True NCI_RA007_Epitope_Rep2 1175.56699667083 1175.56588993586 27.75 2 0.16747784136193364 0.0006531678641410843 0.002020857619705197 ['ENSG00000140575|ENST00000268182|IQGAP1', 'ENST00000561132.5_1_15:91029339-91034840:+|nuORF'] 40012 12156 HPQVNIYSV True PC9_epitope_Rep4 1055.53999407735 1055.5388899358602 54.576 2 0.1674764403513781 0.0006531678641410843 0.0020209229191436463 ['ENSG00000075618|ENST00000382361|FSCN1'] 68342 15435 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.57517496793 64.528 1 0.16747506307227814 0.0006531678641410843 0.0020209871145438637 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 142460 20082 YYFPVKNVI True PC9_epitope_Rep5 1141.6171817688898 1141.6160899358601 82.295 2 0.16747453602359447 0.0006531678641410843 0.002021011680983745 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 54385 16295 KYFDKVVTL True PC9_epitope_Rep1 1111.62774645259 1111.62664993586 67.498 2 0.16747122088601038 0.0006531678641410843 0.0020211662108009583 ['ENSG00000166813|ENST00000394412|KIF7'] 74851 17845 NHFPGSFQI True PC9_epitope_Rep2 1045.49812926537 1045.4970299358602 73.941 2 0.16746755617034825 0.0006531678641410843 0.002021337049389661 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 17461 12318 EHFDASHVAL True PC9_epitope_Rep1 1124.5250722892 1124.52343490379 52.236 3 0.16746671680021954 0.0006531678641410843 0.002021376180462778 ['ENSG00000164062|ENST00000296456|APEH'] 104732 13876 SQVEILQRV True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 58.656 2 0.16745717559513643 0.0006531678641410843 0.0020218210405767937 ['ENSG00000117318|ENST00000374561|ID3'] 4808 6869 ALEEAMEQK True PC9_epitope_Rep1 1047.4906609264297 1047.4895699358601 31.226 2 0.16745609762637506 0.0006531678641410843 0.0020218713071866834 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 45129 20890 IPMELVNEV True PC9_epitope_Rep3 1042.53688284286 1042.53578993586 85.628 2 0.16745050162864572 0.0006531678641410843 0.002022132273455094 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A'] 98249 10181 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 44.101 2 0.1674473292558274 0.0006531678641410843 0.002022280230272223 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 8812 6980 AVDSQILPK True NCI_RA007_Epitope_Rep5 969.5494961318899 969.54838993586 33.53 2 0.1674472692574792 0.0006531678641410843 0.002022283028649353 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF'] 54666 12866 KYLSVQGQLF True NCI_RA007_Epitope_Rep2 1181.64445914589 1181.6433699358602 54.665 2 0.16744445739345132 0.0006531678641410843 0.0020224141808697187 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 140176 15101 YQTEIGQTL True PC9_epitope_Rep4 1051.51858992643 1051.51748993586 66.015 2 0.16743558575480605 0.0006531678641410843 0.002022828031566066 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 99005 8458 SHDPVSGTQGL True PC9_epitope_Rep5 1096.51490152832 1096.51380993586 37.476 2 0.1674328543552747 0.0006531678641410843 0.0020229554649415712 ['ENSG00000138771|ENST00000296043|SHROOM3'] 85577 14855 QGFQLTHSL True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 62.404 2 0.16743056067667347 0.0006531678641410843 0.002023062482659598 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'TUBB2A|p.G140V|1|0.41|ENSG00000137267|chr6:3154782-3154782|C/A|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 9067 16406 AVIDVGINRV True PC9_epitope_Rep3 1054.61349337078 1054.6123899358602 68.243 2 0.16742907011504482 0.0006531678641410843 0.002023132031839403 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 41490 15029 HYM[Oxidation]PPPYASL True PC9_epitope_Rep1 1190.5430312328997 1190.54192993586 62.629 2 0.1674260431669007 0.0006531678641410843 0.0020232732757331394 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 86336 20319 QIYDIFQKL True PC9_epitope_Rep4 1166.6335601090198 1166.6324699358602 86.299 2 0.16742081168867298 0.0006531678641410843 0.002023517410978985 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 105439 8062 SRTSIQSEL True PC9_epitope_Rep2 1019.52473793603 1019.52364993586 36.369 2 0.16741653472142215 0.0006531678641410843 0.002023717024339546 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 70856 17671 LYDPVISKL True PC9_epitope_Rep4 1046.6011973515801 1046.60010993586 75.997 2 0.16741587171932237 0.0006531678641410843 0.0020237479695418056 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 8274 5687 ATIEEAYSR True NCI_RA007_Epitope_Rep5 1038.4981888350198 1038.49708993586 28.563 2 0.16741257576741653 0.0006531678641410843 0.002023901813028841 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 107406 13387 SVLNLVIVK True NCI_RA007_Epitope_Rep4 983.6379172134699 983.63682993586 58.664 2 0.16740486063740734 0.0006531678641410843 0.002024261973996584 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 63557 12523 LM[Oxidation]DHTIPEV True PC9_epitope_Rep5 1069.51139675145 1069.51028993586 53.169 2 0.16740387012791139 0.0006531678641410843 0.002024308218022773 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 106548 4952 STLTYRMTK True NCI_RA007_Epitope_Rep4 1099.5695799534699 1099.56848993586 25.513 2 0.16740370511146183 0.0006531678641410843 0.0020243159222666338 ['ENST00000446662.5_1_16:22466144-22470768:+|nuORF', 'ENST00000522841.6_1_16:21490806-21495758:-|nuORF'] 49513 21598 KFIDPIYQVW True PC9_epitope_Rep5 1307.69140933831 1307.6903099358601 88.116 2 0.16739701581384583 0.0006531678641410843 0.0020246282550916016 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 95620 16265 RYALQLQQI True PC9_epitope_Rep4 1131.64004247179 1131.6389499358602 70.516 2 0.16739435240087225 0.0006531678641410843 0.002024752627046745 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1'] 97649 8912 SEGFAVIKEA True H1975_Epitope_Rep1 1049.53932537101 1049.53822993586 39.183 2 0.16739247113821498 0.0006531678641410843 0.0020248404799557028 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 4825 13955 ALEEQLQQIR True PC9_epitope_Rep3 1226.6619001151798 1226.66080993586 58.754 2 0.16738521911256257 0.0006531678641410843 0.00202517917729503 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 5014 20114 ALIDRMVNL True PC9_epitope_Rep5 1043.57975071435 1043.57864993586 82.415 2 0.16738328155000934 0.0006531678641410843 0.0020252696784681407 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 31516 19201 GEDFLSWNDL True H1975_Epitope_Rep1 1194.51931820242 1194.51822993586 80.012 2 0.1673809167209686 0.0006531678641410843 0.0020253801422158986 ['ENSG00000183856|ENST00000361170|IQGAP3'] 103351 8873 SPNMANTVNA True PC9_epitope_Rep5 1017.45494412405 1017.45384993586 39.074 2 0.16735476607268496 0.0006531678641410843 0.0020266020693287144 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 37675 10172 GVYGDVQRV True PC9_epitope_Rep1 991.5086939490699 991.50758993586 44.003 2 0.16735145897387663 0.0006531678641410843 0.0020267566508355038 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 70806 16663 LYAPYSTHF True PC9_epitope_Rep5 1097.51819600361 1097.5170899358602 69.099 2 0.16734394368145658 0.0006531678641410843 0.0020271079769642077 ['ENSG00000013588|ENST00000014914|GPRC5A'] 96127 12608 RYNPNLNTW True PC9_epitope_Rep4 1176.5676058075198 1176.56650993586 56.336 2 0.16733609153272247 0.0006531678641410843 0.0020274751155637642 ['ENSG00000178502|ENST00000319121|KLHL11'] 95953 6069 RYLENGKETL True PC9_epitope_Rep4 1221.6353510141698 1221.6337049037902 30.344 3 0.16733282718189674 0.0006531678641410843 0.002027627764586981 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 99306 7778 SHSELIHNL True PC9_epitope_Rep2 1048.5301576696402 1048.5290699358602 35.29 2 0.16732499182882987 0.0006531678641410843 0.002027994211749593 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 26560 13132 FIIYDTHSL True NCI_RA007_Epitope_Rep2 1107.56006081559 1107.5589699358602 55.713 2 0.16732436914265184 0.0006531678641410843 0.0020280233366451682 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 54806 14472 KYPDIISRI True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 63.577 2 0.16731950683387964 0.0006531678641410843 0.002028250775759617 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 17482 7033 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.5352099358602 31.859 2 0.16731747084375978 0.0006531678641410843 0.002028346018708865 ['ENSG00000162378|ENST00000294353|ZYG11B'] 54536 6142 KYIHSANVL True NCI_RA007_Epitope_Rep4 1043.57637958607 1043.5752899358602 30.238 2 0.16731587171768889 0.0006531678641410843 0.0020284208284372493 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 112498 15621 TLDPQTGLFY True H1975_Epitope_Rep2 1153.5655401188499 1153.56444993586 65.242 2 0.1673079415876312 0.0006531678641410843 0.0020287918536381526 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 69667 7978 LVDTAGQDEY True H1975_Epitope_Rep2 1109.48768372097 1109.4865899358601 35.634 2 0.1673066522640348 0.0006531678641410843 0.002028852183343168 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 142560 15369 YYLNEIQSF True NCI_RA007_Epitope_Rep3 1175.5498900547097 1175.5487899358602 68.014 2 0.16730422585639976 0.0006531678641410843 0.0020289657240631373 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 128483 6669 VPSLQGEKA True PC9_epitope_Rep5 927.5025459394699 927.50144993586 30.625 2 0.16729577687485075 0.0006531678641410843 0.0020293611332067906 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 130103 13071 VSDPLIGGTY True H1975_Epitope_Rep2 1020.5127762699999 1020.51166993586 55.4 2 0.16728781218357147 0.0006531678641410843 0.002029733948307663 ['ENSG00000169359|ENST00000643144|SLC33A1'] 2473 6910 AEQLRGFNA True H1975_Epitope_Rep2 1004.5039429217999 1004.50284993586 31.5 2 0.16728261846937076 0.0006531678641410843 0.002029977095072236 ['ENSG00000196878|ENST00000356082|LAMB3'] 96602 7737 SAGPAIKL True H1975_Epitope_Rep2 755.45413919507 755.45304993586 34.712 2 0.16727773309466426 0.0006531678641410843 0.0020302058333276853 ['ENSG00000166897|ENST00000402918|ELFN2'] 18145 18777 EIITIIHQV True PC9_epitope_Rep5 1064.6229954253201 1064.62188993586 77.238 2 0.16726534895086217 0.0006531678641410843 0.002030785787130783 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 128546 4981 VPSYPSKSA True PC9_epitope_Rep5 934.47599683846 934.47488993586 24.193 2 0.16726116087789197 0.0006531678641410843 0.002030981953542935 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 142343 9541 YYEEQHPEL True PC9_epitope_Rep6 1206.5193182024198 1206.51822993586 46.982 2 0.16725885254460338 0.0006531678641410843 0.0020310900823616437 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 45436 10791 IQHSEFEEV True PC9_epitope_Rep5 1116.50875351872 1116.5076499358602 46.497 2 0.1672549817627798 0.0006531678641410843 0.0020312714135813322 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1'] 31764 9856 GEHTLLVTV True NCI_RA007_Epitope_Rep3 967.5338460677499 967.53274993586 45.841 2 0.1672450812691863 0.0006531678641410843 0.0020317352872339933 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 142103 14332 YVPETVYRV True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 60.215 2 0.16724421508430218 0.0006531678641410843 0.002031775876143121 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 8659 6237 AVAEPLPSPR True NCI_RA007_Epitope_Rep3 1035.5712942056298 1035.57018993586 31.538 2 0.16723762558091465 0.0006531678641410843 0.0020320846829066774 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 77559 12812 NTDNLLTEY True H1975_Epitope_Rep3 1081.49276910141 1081.49166993586 54.5 2 0.1672375850773502 0.0006531678641410843 0.0020320865811879643 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 129328 12995 VQYNEPLKV True PC9_epitope_Rep1 1088.5866099165999 1088.58550993586 54.856 2 0.16723512645414373 0.0006531678641410843 0.0020322018128468714 ['ENSG00000148843|ENST00000369797|PDCD11'] 116766 17254 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54427496793 72.012 1 0.1672346004820787 0.0006531678641410843 0.002032226465147981 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 31753 7970 GEHGLIIRV True NCI_RA007_Epitope_Rep5 992.57671393924 992.57560993586 37.344 2 0.1672300015890747 0.0006531678641410843 0.0020324420279183757 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 92378 16465 RLPETLPSL True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 75.748 2 0.16722529425101612 0.0006531678641410843 0.0020326626974869625 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 73355 8842 MTEKQLNLY True H1975_Epitope_Rep3 1138.5692456002998 1138.5681499358602 39.017 2 0.16722095554069105 0.0006531678641410843 0.002032866107822633 ['ENSG00000167985|ENST00000301761|SDHAF2', 'SDHAF2|p.D106Y|1|0.36|ENSG00000256591|chr11:61438059-61438059|G/T|missense_variant', 'ENST00000536250.1_1_11:61204372-61205638:+|nuORF', 'ENSG00000256591|ENST00000541135|unknown'] 128761 20868 VPYLVGQVV True PC9_epitope_Rep5 972.5644179200399 972.56386496793 85.321 1 0.16721822700591907 0.0006531678641410843 0.0020329940392505423 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 134023 10069 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5281849037901 43.711 3 0.1672167345650538 0.0006531678641410843 0.0020330640179755956 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 140056 17058 YQHGIFQSI True PC9_epitope_Rep5 1091.53999407735 1091.5388899358602 70.632 2 0.16719609940864508 0.0006531678641410843 0.0020340318221254336 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1'] 115470 15856 TRNDYVMMY True PC9_epitope_Rep1 1191.50526544475 1191.50416993586 65.802 2 0.167194634316985 0.0006531678641410843 0.002034100553524951 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 76715 16731 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53856993586 69.494 2 0.16718303128185463 0.0006531678641410843 0.0020346449652195214 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 118225 12907 TYLDKIKKF True PC9_epitope_Rep5 1154.66994561774 1154.6683049037902 54.659 3 0.16717364525452602 0.0006531678641410843 0.0020350854620293526 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 29228 18582 FTVDKDITL True PC9_epitope_Rep3 1050.55972646242 1050.5586299358602 76.702 2 0.1671676997319841 0.0006531678641410843 0.002035364541418836 ['KIF5B-MET|1|fusion', 'ENSG00000170759|ENST00000302418|KIF5B'] 41223 13256 HVLDVIHEV True PC9_epitope_Rep6 1059.57129420563 1059.57018993586 62.639 2 0.16716473820789365 0.0006531678641410843 0.0020355035679256654 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 8505 6940 ATSPALFNR True NCI_RA007_Epitope_Rep3 975.51377932951 975.51268993586 34.405 2 0.16716334756802112 0.0006531678641410843 0.002035568853738303 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108403 16800 SYLKQLPHF True PC9_epitope_Rep5 1131.6076797143498 1131.60604490379 69.629 3 0.16716139150155412 0.0006531678641410843 0.0020356606879506673 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 140771 12085 YSDGLGGNSLY True H1975_Epitope_Rep3 1144.5036681382799 1144.50256993586 51.65 2 0.16715847339186707 0.0006531678641410843 0.002035797696264057 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 76718 15735 NQTPVTLQV True PC9_epitope_Rep4 998.5396597241801 998.53911496793 68.449 1 0.16715758221875573 0.0006531678641410843 0.0020358395396152286 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 24774 17342 FASPTQVFF True H1975_Epitope_Rep2 1042.5123823471797 1042.51128993586 72.0 2 0.16715279568841218 0.0006531678641410843 0.002036064296826979 ['ENSG00000099624|ENST00000215375|ATP5F1D'] 137663 17286 YEILTPNSIPK True PC9_epitope_Rep5 1273.69180326113 1273.69070993586 71.498 2 0.16714632311549985 0.0006531678641410843 0.002036368263630989 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 128931 11274 VQIEEVRQV True PC9_epitope_Rep3 1098.6033226098998 1098.6022299358601 48.374 2 0.16714339512194798 0.0006531678641410843 0.00203650578380084 ['ENSG00000143621|ENST00000361891|ILF2'] 36065 17592 GVAANDVIVHI True PC9_epitope_Rep3 1106.6084079903399 1106.60730993586 72.856 2 0.16714300710916152 0.0006531678641410843 0.002036524008439579 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 34567 4509 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 23.995 2 0.16714246335688784 0.0006531678641410843 0.002036549548307268 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 133883 12233 VYGSFASKL True PC9_epitope_Rep6 970.5123823471799 970.51128993586 58.429 2 0.16713451187936598 0.0006531678641410843 0.002036923063213103 ['ENSG00000155096|ENST00000337198|AZIN1'] 4478 19497 AIVDLIHDI True PC9_epitope_Rep6 1007.5651461960299 1007.56404993586 87.657 2 0.16713102078834066 0.0006531678641410843 0.0020370870763289986 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 9894 18132 AYLKGTVLF True PC9_epitope_Rep4 1010.5800679841799 1010.57896993586 77.809 2 0.16712918130351923 0.0006531678641410843 0.0020371735015126463 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 76707 16767 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53911496793 69.318 1 0.16712779922128346 0.0006531678641410843 0.002037238438796767 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 77111 15374 NRMDYYNAL True PC9_epitope_Rep1 1158.51279335334 1158.5116899358602 63.954 2 0.16712505304010097 0.0006531678641410843 0.0020373674745608177 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 44037 19171 IIIPEIQKV True PC9_epitope_Rep5 1051.66413196131 1051.66302993586 78.778 2 0.1671170907596452 0.0006531678641410843 0.002037741647185593 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 141335 8843 YTDSYTDTY True H1975_Epitope_Rep3 1127.42950013851 1127.4284099358601 39.02 2 0.16711699506351158 0.0006531678641410843 0.0020377461446660534 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 17252 7180 EHAGGEVEL True PC9_epitope_Rep2 939.42977492203 939.42866993586 33.008 2 0.16710902176174272 0.0006531678641410843 0.0020381209049036494 ['ENSG00000218891|ENST00000325421|ZNF579'] 43819 8059 IHSEPLGV True PC9_epitope_Rep6 850.45486747106 850.45376993586 40.492 2 0.16710825655003864 0.0006531678641410843 0.0020381568749229186 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 107443 11306 SVLSPLLNK True NCI_RA007_Epitope_Rep1 969.5858816406101 969.58478993586 47.957 2 0.16710084325579735 0.0006531678641410843 0.0020385053817284365 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 40170 20286 HQDSTWIVL True PC9_epitope_Rep5 1097.55055876105 1097.54946993586 83.079 2 0.16709794522158497 0.0006531678641410843 0.0020386416375831576 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 54503 15348 KYIDQKFVL True PC9_epitope_Rep5 1152.6542955536 1152.65263490379 64.045 3 0.16707725089346515 0.0006531678641410843 0.0020396148802724018 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 111107 13506 THEDGVLEL True PC9_epitope_Rep4 1011.48728979815 1011.48618993586 59.847 2 0.16706627238568 0.0006531678641410843 0.0020401313819644043 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 95705 21581 RYFLPPYTF True PC9_epitope_Rep5 1202.6124307416196 1202.61132993586 88.051 2 0.16706483187902407 0.0006531678641410843 0.0020401991626405862 ['ENSG00000023608|ENST00000216294|SNAPC1'] 33746 7784 GLIYEETR True NCI_RA007_Epitope_Rep2 979.49746055903 979.49636993586 34.906 2 0.16706264453783226 0.0006531678641410843 0.0020403020886956918 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000275663|ENST00000611444|H4C7'] 54768 18143 KYNANFVTF True PC9_epitope_Rep3 1102.54474510462 1102.54364993586 74.988 2 0.16705802449135757 0.0006531678641410843 0.0020405195035595675 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 140334 12598 YRDNDSDLAL True PC9_epitope_Rep1 1180.53603089572 1180.5349299358602 53.327 2 0.16705728749252918 0.0006531678641410843 0.002040554188145402 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 128540 5042 VPSYPSKSA True PC9_epitope_Rep1 934.47599683846 934.47488993586 24.251 2 0.16703950663986863 0.0006531678641410843 0.002041391168065689 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 39846 20254 HPAAFPLPVV True PC9_epitope_Rep1 1046.59130137422 1046.59020993586 82.736 2 0.16702279418473115 0.0006531678641410843 0.0020421781693698484 ['ENSG00000108523|ENST00000262482|RNF167'] 39128 11811 HHYEGAVVIL True PC9_epitope_Rep6 1136.5978433066398 1136.59674993586 56.627 2 0.16702024821215308 0.0006531678641410843 0.0020422980876420318 ['ENSG00000163655|ENST00000496455|GMPS'] 18964 12360 ELEKSVYWDY True H1975_Epitope_Rep2 1330.60813320682 1330.60702993586 52.628 2 0.16701929366605103 0.0006531678641410843 0.0020423430496894967 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'SGSM2|p.P666Rfs*58|1|0.3|ENSG00000141258|chr17:2375519-2375519|C/-|frameshift_variant', 'ENSG00000141258|ENST00000268989|SGSM2'] 53664 10074 KSDLFFHDY True H1975_Epitope_Rep3 1170.53457434374 1170.53346993586 43.788 2 0.167018143997185 0.0006531678641410843 0.002042397203931269 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 9982 12029 AYPHNLMTF True NCI_RA007_Epitope_Rep4 1092.50625142092 1092.5051499358601 53.271 2 0.167016930865754 0.0006531678641410843 0.002042454349083885 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 96134 19443 RYPAIIYNI True PC9_epitope_Rep2 1121.62332977849 1121.62222993586 80.167 2 0.1670163615933586 0.0006531678641410843 0.002042481165491176 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1'] 97532 9190 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 40.302 1 0.16701011809808727 0.0006531678641410843 0.002042775297557393 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 23926 15229 EYLERAPEL True PC9_epitope_Rep1 1118.5607890915799 1118.5596899358602 63.399 2 0.16700383832122717 0.0006531678641410843 0.002043071181580407 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 17762 20486 EHSIATLLL True PC9_epitope_Rep5 995.56514619603 995.56404993586 83.838 2 0.1669892217270404 0.0006531678641410843 0.0020437600370992346 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 96150 10554 RYPDRITLI True NCI_RA007_Epitope_Rep2 1145.65569253593 1145.65458993586 45.65 2 0.16698769280460246 0.0006531678641410843 0.0020438321060602354 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 25506 14338 FEGIVTDLIR True H1975_Epitope_Rep3 1161.63937376545 1161.63826993586 60.499 2 0.16698417801412685 0.0006531678641410843 0.002043997792706155 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 78180 16664 NYATRIVTL True PC9_epitope_Rep3 1049.58694426977 1049.58584993586 69.234 2 0.16697025090820874 0.0006531678641410843 0.002044654446252188 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 42390 9919 IEDFEARIA True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 43.142 2 0.16695577950883206 0.0006531678641410843 0.00204533698633807 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 95987 14685 RYLGKVLEL True PC9_epitope_Rep2 1089.65462990677 1089.6535299358602 61.749 2 0.16694788420252762 0.0006531678641410843 0.0020457094626226313 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000573641.1_1_17:2598433-2598937:-|nuORF'] 23867 23719 EYIQFVPLL True PC9_epitope_Rep5 1120.6168474157198 1120.61574993586 96.216 2 0.1669432749840128 0.0006531678641410843 0.002045926942741761 ['ENSG00000179409|ENST00000319004|GEMIN4'] 115442 14896 TRMPDGPVAL True PC9_epitope_Rep3 1055.54336520563 1055.54226993586 62.433 2 0.16693278034619996 0.0006531678641410843 0.0020464222051433147 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 10030 7977 AYRQGHFTY True PC9_epitope_Rep5 1141.53049202281 1141.52938993586 35.623 2 0.16693157780838475 0.0006531678641410843 0.002046478962900258 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 103797 12410 SPVYVGRVV True PC9_epitope_Rep1 974.5549158654999 974.55380993586 52.598 2 0.16693135523819333 0.0006531678641410843 0.0020464894680105854 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 32242 5821 GEYRGSDFTA True NCI_RA007_Epitope_Rep3 1101.47270236317 1101.4716099358602 29.877 2 0.16692925731726105 0.0006531678641410843 0.0020465884906175095 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 141686 11208 YTTDRVMTV True PC9_epitope_Rep5 1084.5222954078802 1084.52118993586 48.099 2 0.16692786129547701 0.0006531678641410843 0.0020466543859922292 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 49078 5731 KEIEELQSQA True NCI_RA007_Epitope_Rep5 1173.58773211541 1173.5866299358602 28.731 2 0.16691867454814402 0.0006531678641410843 0.0020470880740936256 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 54574 14596 KYITDWQNVF True NCI_RA007_Epitope_Rep3 1312.6451874218799 1312.6440899358602 64.755 2 0.16691762746281186 0.0006531678641410843 0.0020471375107466517 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 45685 14628 IRKPYIWEY True PC9_epitope_Rep4 1266.67609362734 1266.6744449037901 64.196 3 0.16691081247204267 0.0006531678641410843 0.002047459300069088 ['ENSG00000136628|ENST00000366923|EPRS1'] 31666 10188 GEFSITYKP True H1975_Epitope_Rep2 1040.5178616504397 1040.51676993586 44.191 2 0.16689485000329313 0.0006531678641410843 0.0020482132117750915 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 108666 19943 SYQKVIELF True PC9_epitope_Rep2 1125.6070110080097 1125.6059099358602 82.108 2 0.16689358731132958 0.0006531678641410843 0.002048272860903532 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 43292 19160 IFTDLSSRF True PC9_epitope_Rep2 1084.55530978832 1084.5542099358602 79.072 2 0.16689108090072752 0.0006531678641410843 0.0020483912680132436 ['ENSG00000079246|ENST00000392132|XRCC5'] 63016 18186 LLPSRQFGF True PC9_epitope_Rep2 1063.5814649665099 1063.58036993586 75.26 2 0.16688673920798086 0.0006531678641410843 0.0020485963931775554 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 35882 7130 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep4 1016.46708941132 1016.46598993586 34.045 2 0.16688271002124894 0.0006531678641410843 0.002048786772234629 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 40731 6602 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.6131299358601 30.197 2 0.16688028409413422 0.0006531678641410843 0.0020489014058135 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 31442 8599 GEALASISHVA True H1975_Epitope_Rep3 1053.54547338061 1053.54436993586 38.068 2 0.1668717912821723 0.0006531678641410843 0.002049302771546678 ['ENSG00000076242|ENST00000231790|MLH1', 'ENST00000539477.5_1_3:37035370-37053334:+|nuORF', 'ENST00000466900.5_1_3:37035370-37047454:+|nuORF'] 104716 12938 SQVDVAVKI True PC9_epitope_Rep2 957.5494961318899 957.54838993586 55.061 2 0.16686727106058624 0.0006531678641410843 0.0020495164268489498 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 46637 7554 ITDIVNKY True H1975_Epitope_Rep3 964.52294703088 964.52184993586 34.038 2 0.16686726483475317 0.0006531678641410843 0.0020495167211379887 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'ENST00000490114.1_1_20:37202892-37204542:+|nuORF'] 54008 13277 KVFNDYTAV True PC9_epitope_Rep1 1055.52876068731 1055.52766993586 55.934 2 0.16686485422380196 0.0006531678641410843 0.002049630671535984 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 62027 20846 LLDRFLATV True PC9_epitope_Rep5 1046.61243074162 1046.61132993586 85.234 2 0.16686483699135088 0.0006531678641410843 0.0020496314861426 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 107426 14926 SVLQQNPSL True PC9_epitope_Rep1 984.52400966004 984.52290993586 62.235 2 0.16685931261113246 0.0006531678641410843 0.002049892649469838 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 62721 23778 LLLPDYYLVTV True PC9_epitope_Rep1 1307.73769082439 1307.7365899358601 96.258 2 0.1668564650313107 0.0006531678641410843 0.0020500272809013836 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 3415 12251 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5851699358602 52.147 2 0.16684640539337653 0.0006531678641410843 0.0020505029638076596 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 54331 14242 KYDPNVYSI True PC9_epitope_Rep5 1097.53932537101 1097.53822993586 59.787 2 0.16684445565863126 0.0006531678641410843 0.002050595172288466 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 91136 20160 RFVNVVPTF True PC9_epitope_Rep5 1077.5971150306498 1077.5960099358601 82.594 2 0.16684172740751455 0.0006531678641410843 0.0020507242059746066 ['ENSG00000149806|ENST00000529639|FAU'] 20800 19791 EQIEALLHTV True PC9_epitope_Rep2 1151.6186383208699 1151.61754993586 81.515 2 0.1668416917891414 0.0006531678641410843 0.0020507258906129556 ['nc|ENSG00000241258|O75575-3|CRCP', 'ENST00000492264.1_1_7:65615923-65617341:+|nuORF', 'nc|ENSG00000241258|O75575-4|CRCP', 'nc|ENSG00000241258|O75575-2|CRCP', 'ENSG00000241258|ENST00000395326|CRCP'] 44155 20830 IITDLLRSV True PC9_epitope_Rep1 1028.62299542532 1028.62188993586 84.95 2 0.16684107498301767 0.0006531678641410843 0.0020507550638450716 ['ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1'] 38014 19715 HAMTEFLEV True PC9_epitope_Rep5 1075.50083168731 1075.4997299358602 80.879 2 0.16684099627925342 0.0006531678641410843 0.0020507587863463693 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 104768 15345 SQWDSPMRV True PC9_epitope_Rep1 1104.5022286696399 1104.50112993586 63.843 2 0.16683983440524458 0.0006531678641410843 0.002050813741016201 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 75072 11372 NHVASDISL True PC9_epitope_Rep3 954.47705946762 954.47596993586 48.745 2 0.16683336525431772 0.0006531678641410843 0.002051119747807648 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 93604 7380 RQPDSGISSI True PC9_epitope_Rep6 1058.5356369729 1058.53452993586 37.595 2 0.16683314709472952 0.0006531678641410843 0.002051130068089909 ['ENSG00000163902|ENST00000296255|RPN1'] 34936 4828 GQNPTNAEVLK True NCI_RA007_Epitope_Rep5 1169.6040508858898 1169.6029499358601 25.261 2 0.1668330183663418 0.0006531678641410843 0.002051136157754001 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 95895 22087 RYLDLFTNF True PC9_epitope_Rep5 1187.59750895347 1187.59640993586 89.987 2 0.16683299349204456 0.0006531678641410843 0.002051137334467124 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.Y111*|1|0.1|ENSG00000100196|chr22:38479732-38479733|AC/-|frameshift_variant'] 95405 20513 RWFDKSFTF True PC9_epitope_Rep1 1232.59784330664 1232.5961849037901 83.713 3 0.1668282395848125 0.0006531678641410843 0.002051362237033424 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 44908 8598 INPDLALEEK True H1975_Epitope_Rep1 1140.60265390356 1140.60154993586 38.002 2 0.16682528376224015 0.0006531678641410843 0.0020515020864563973 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1', 'ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 141377 8930 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43407496793 39.254 1 0.1668186431017903 0.0006531678641410843 0.0020518163121184645 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 11927 16905 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.54754490379 70.269 3 0.16681198015670032 0.0006531678641410843 0.0020521316406236557 ['ENSG00000273749|ENST00000617928|CYFIP1'] 25447 5205 FEEESKEPVA True H1975_Epitope_Rep2 1163.53463391339 1163.53352993586 25.092 2 0.16680680129191985 0.0006531678641410843 0.002052376767466281 ['ENSG00000074201|ENST00000525428|CLNS1A'] 126470 19142 VLLGKVYVV True PC9_epitope_Rep1 988.63210355704 988.63100993586 78.423 2 0.16680674797941164 0.0006531678641410843 0.0020523792910145523 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 107380 11716 SVLKSIQEV True PC9_epitope_Rep6 1001.57571087973 1001.5746099358599 56.212 2 0.16680666008990683 0.0006531678641410843 0.0020523834512721825 ['ENSG00000039123|ENST00000230640|MTREX'] 53803 9921 KTDLDLDGY True H1975_Epitope_Rep2 1038.48695544498 1038.4858499358602 43.15 2 0.1667929098952544 0.0006531678641410843 0.0020530344218428463 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 87206 14930 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49618496793 62.252 1 0.16679188451717775 0.0006531678641410843 0.002053082974223409 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 54649 14265 KYLNSVQYI True PC9_epitope_Rep4 1126.60225998074 1126.60116993586 62.774 2 0.16679170487423456 0.0006531678641410843 0.002053091480562615 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'RALGPS2|p.D401Mfs*5|1|0.09|ENSG00000116191|chr1:178889650-178889650|G/-|frameshift_variant', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 52863 22226 KPFDLVIPFA True PC9_epitope_Rep5 1145.64848189717 1145.64738993586 90.498 2 0.16679138912761168 0.0006531678641410843 0.0020531064316827285 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 73205 17794 MRYVASYLL True PC9_epitope_Rep6 1114.5845017416198 1114.5834099358601 81.079 2 0.1667712312386671 0.0006531678641410843 0.0020540611661392376 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 14454 8644 DTENQTLNY True H1975_Epitope_Rep2 1096.46728262956 1096.46618993586 38.207 2 0.16676855350166492 0.0006531678641410843 0.002054188024711977 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217'] 75755 19035 NLLPKLHIV True PC9_epitope_Rep1 1045.66480066765 1045.6637099358602 78.009 2 0.16676712301898897 0.0006531678641410843 0.002054255797457058 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 60310 12677 LGSFLYEYSR True NCI_RA007_Epitope_Rep2 1233.6029882567298 1233.60188993586 53.925 2 0.16675802884864135 0.0006531678641410843 0.002054686709136354 ['CON__P02769'] 40830 9915 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46561496793 43.126 1 0.16675799524736318 0.0006531678641410843 0.0020546883014429234 ['ENSG00000146830|ENST00000678049|GIGYF1'] 141294 6405 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep3 1167.39140075807 1167.3903099358602 29.613 2 0.16675738486472355 0.0006531678641410843 0.002054717226637397 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 9072 14186 AVIDVGINRV True PC9_epitope_Rep6 1054.61349337078 1054.6123899358602 66.448 2 0.16675398386791251 0.0006531678641410843 0.002054878402657451 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 95356 15719 RVVDLLNQA True PC9_epitope_Rep3 1026.5821932425 1026.58108993586 65.621 2 0.16673971257707368 0.0006531678641410843 0.002055554868637585 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 26417 20093 FIAKSFYDL True PC9_epitope_Rep1 1102.5698972233 1102.5688099358601 82.115 2 0.16673851733222836 0.0006531678641410843 0.00205561153391696 ['ENSG00000176153|ENST00000389614|GPX2'] 87552 20759 QQLEGAFAL True PC9_epitope_Rep1 975.5025459394698 975.50144993586 84.678 2 0.16672851007074624 0.0006531678641410843 0.0020560860287670707 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 17644 13191 EHIVPNAEL True PC9_epitope_Rep1 1020.52400966004 1020.52290993586 55.603 2 0.16672762179716932 0.0006531678641410843 0.0020561281515989282 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 90250 10024 REEEQAFLV True H1975_Epitope_Rep2 1119.5560380643099 1119.5549499358601 43.548 2 0.16672527559216918 0.0006531678641410843 0.0020562394151637875 ['ENSG00000196843|ENST00000357485|ARID5A'] 139938 19989 YQAPDIDVQL True PC9_epitope_Rep4 1160.57135377528 1160.5702499358601 85.021 2 0.16672410647925248 0.0006531678641410843 0.00205629485999646 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 39703 12596 HLSVNDLPVGR True PC9_epitope_Rep5 1205.65166978465 1205.6500349037901 53.451 3 0.16672310393020345 0.0006531678641410843 0.0020563424067778086 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 70505 17041 LVVTNLDKL True PC9_epitope_Rep2 1013.6120963884499 1013.61098993586 70.799 2 0.16672048369183318 0.0006531678641410843 0.0020564666791068713 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 89528 15804 QYLNKNALTTL True PC9_epitope_Rep2 1277.6979512707298 1277.6968499358602 66.05 2 0.1667197247913857 0.0006531678641410843 0.0020565026735423373 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF'] 105002 15746 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.60010993586 65.567 2 0.16671917296097133 0.0006531678641410843 0.0020565288470997616 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 109879 4428 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 22.144 2 0.16671122236193833 0.0006531678641410843 0.0020569059844555127 ['ENSG00000077721|ENST00000371558|UBE2A'] 60760 14125 LHSDLEYTV True PC9_epitope_Rep3 1075.51858992643 1075.51748993586 59.417 2 0.1666999109718781 0.0006531678641410843 0.00205744266041206 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 6649 19033 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 78.238 2 0.1666845060518526 0.0006531678641410843 0.002058173781647111 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 49441 9266 KEYDGVVVV True H1975_Epitope_Rep2 1006.5335117145797 1006.53240993586 40.597 2 0.16667998251707045 0.0006531678641410843 0.0020583885190411763 ['ENSG00000198695|ENST00000361681|MT-ND6'] 116760 17362 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 72.076 2 0.16667823147527094 0.0006531678641410843 0.002058471649021757 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 128845 18447 VQDELHSVLGL True PC9_epitope_Rep6 1208.64010204144 1208.63900993586 83.6 2 0.1666772424208555 0.0006531678641410843 0.002058518605452025 ['ENSG00000204560|ENST00000376442|DHX16'] 116574 17952 TTYEGIFKTL True PC9_epitope_Rep6 1171.6124903112698 1171.6113899358602 81.68 2 0.16667641550823115 0.0006531678641410843 0.0020585578648470992 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 128334 6417 VPQEAQKIQA True PC9_epitope_Rep5 1110.6033226098998 1110.6022299358601 29.66 2 0.16667609152242618 0.0006531678641410843 0.002058573246950527 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN'] 134755 20241 VYTSVVEEL True PC9_epitope_Rep1 1037.5280919809697 1037.52698993586 82.684 2 0.16666549681138182 0.0006531678641410843 0.002059076322882071 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 141903 10406 YVEDPQGNTIY True H1975_Epitope_Rep3 1297.58264673497 1297.58154993586 45.084 2 0.1666614618504905 0.0006531678641410843 0.0020592679500202648 ['ENSG00000166557|ENST00000299705|TMED3', 'nc|ENSG00000166557|Q9Y3Q3-2|TMED3'] 15015 16244 DYKNTFPKW True PC9_epitope_Rep1 1197.5818588893299 1197.5807699358602 67.3 2 0.16664243565710662 0.0006531678641410843 0.0020601717765353347 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1'] 131044 10849 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.48110993586 46.689 2 0.16664110097638307 0.0006531678641410843 0.0020602351945317714 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 133206 11954 VVSEGVPRI True PC9_epitope_Rep5 954.5498304850599 954.54872993586 50.978 2 0.1666382857825416 0.0006531678641410843 0.0020603689662219496 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 137547 8126 YEELQSLAGK True H1975_Epitope_Rep1 1136.5713537752797 1136.5702499358601 36.196 2 0.16663769170309875 0.0006531678641410843 0.0020603971966528896 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 38532 7124 HESDFSGVTP True H1975_Epitope_Rep2 1074.4618033263 1074.4607099358602 32.336 2 0.1666307887971896 0.0006531678641410843 0.0020607252484943967 ['ENSG00000096401|ENST00000371477|CDC5L'] 40314 9087 HQQSIPAVL True NCI_RA007_Epitope_Rep4 991.5450794577898 991.5439899358599 41.785 2 0.16662218530343453 0.0006531678641410843 0.0020611341917270397 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 92778 18180 RPADVIFATV True PC9_epitope_Rep4 1087.60259433391 1087.6014899358602 77.997 2 0.16662074324057294 0.0006531678641410843 0.00206120274412873 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 105048 13656 SRDPNYLNL True PC9_epitope_Rep4 1090.54072235334 1090.5396299358601 60.419 2 0.16661752448631167 0.0006531678641410843 0.0020613557646382247 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 99753 22721 SIINFFERL True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 92.2 2 0.16661399898994694 0.0006531678641410843 0.002061523380790379 ['ENSG00000116793|ENST00000369604|PHTF1', 'ENST00000481652.1_1_1:114242829-114248598:-|nuORF', 'nc|ENSG00000116793|Q9UMS5-2|PHTF1'] 116924 16259 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep2 1178.5641606002998 1178.56306993586 67.782 2 0.16661218040630354 0.0006531678641410843 0.0020616098488348985 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 71537 12675 MADPNIRFL True H1975_Epitope_Rep2 1075.54845058607 1075.5473499358602 53.855 2 0.16661152432035092 0.0006531678641410843 0.0020616410445890017 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 49117 9620 KEIQETWTV True H1975_Epitope_Rep3 1132.57643915572 1132.57534993586 42.017 2 0.16661115717042774 0.0006531678641410843 0.0020616585021398207 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 77151 13536 NRPNLYYEV True PC9_epitope_Rep2 1166.57202248162 1166.57092993586 57.359 2 0.16660731822160693 0.0006531678641410843 0.0020618410485338766 ['ENSG00000004700|ENST00000444129|RECQL'] 15007 13352 DYKESFNTI True PC9_epitope_Rep6 1115.5135045459901 1115.5124099358602 63.021 2 0.16660313386660947 0.0006531678641410843 0.0020620400377938846 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 58563 8339 LEQLTGQTP True H1975_Epitope_Rep2 985.50802524273 985.50692993586 37.028 2 0.16660274354469534 0.0006531678641410843 0.0020620586007422882 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 24121 12631 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep6 1300.57578791316 1300.57468993586 60.047 2 0.1666026007860058 0.0006531678641410843 0.0020620653901086564 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 7911 3936 ATALPTGTSK True NCI_RA007_Epitope_Rep4 945.5131106231701 945.51200993586 21.376 2 0.16659744649008476 0.0006531678641410843 0.0020623105348419415 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 134170 12238 VYLPNINKI True NCI_RA007_Epitope_Rep4 1072.62808080576 1072.6269899358601 54.07 2 0.1665859801721227 0.0006531678641410843 0.002062855991730258 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 112135 20132 TIYKDFVYI True PC9_epitope_Rep2 1160.6117620352798 1160.6106699358602 82.848 2 0.16657820712989543 0.0006531678641410843 0.0020632258401953154 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 73364 15084 MTELPAPLSY True H1975_Epitope_Rep1 1120.5474475265598 1120.5468749679299 63.274 1 0.16657756958201309 0.0006531678641410843 0.0020632561782491714 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 129693 11852 VRPPVQVY True PC9_epitope_Rep3 956.5443511817998 956.54324993586 50.607 2 0.16657734958069612 0.0006531678641410843 0.0020632666472319475 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 21250 12135 ERDQATVIL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 51.54 2 0.166577003579351 0.0006531678641410843 0.00206328311215958 ['ENST00000495360.5_1_9:32987651-32989804:-|nuORF'] 111220 5785 THISSQNSEL True PC9_epitope_Rep3 1114.52546621202 1114.52436993586 27.322 2 0.16656857563424485 0.0006531678641410843 0.002063684207553723 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 68214 9408 LTDYLKNTY True H1975_Epitope_Rep1 1129.56554011885 1129.56444993586 41.1 2 0.16656794893894988 0.0006531678641410843 0.0020637140358022283 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000461836.5_1_2:162903409-162929972:-|nuORF'] 1439 9888 AEEFVIVKA True H1975_Epitope_Rep1 1004.5542471591598 1004.55314993586 42.967 2 0.1665656814878319 0.0006531678641410843 0.0020638219612215455 ['ENSG00000196455|ENST00000356763|PIK3R4'] 44122 12768 IIQLLDDYPK True H1975_Epitope_Rep1 1216.67033954056 1216.66924993586 54.173 2 0.1665618793433601 0.0006531678641410843 0.0020640029471545003 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000448115.1_1_1:220490746-220490923:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 326 18995 AAIEIFEKV True PC9_epitope_Rep2 1018.5698972232999 1018.56880993586 78.431 2 0.16655251381895855 0.0006531678641410843 0.002064448823307483 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 90927 11604 REYQDLLNV True NCI_RA007_Epitope_Rep5 1148.5825871653199 1148.5814899358602 51.283 2 0.16654855807927113 0.0006531678641410843 0.002064637178049135 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 71276 22434 LYPSIIQEF True PC9_epitope_Rep5 1108.580461907 1108.57987496793 91.291 1 0.1665445957249723 0.0006531678641410843 0.0020648258649754443 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 76143 19586 NMVDIIHSV True PC9_epitope_Rep2 1026.51681610462 1026.51570993586 80.72 2 0.16654013687496771 0.0006531678641410843 0.0020650382155973884 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 38533 7223 HESDFSGVTP True H1975_Epitope_Rep3 1074.4618033263 1074.4607099358602 32.756 2 0.16653973999608257 0.0006531678641410843 0.0020650571178248023 ['ENSG00000096401|ENST00000371477|CDC5L'] 36640 13929 GVIDLVFEK True NCI_RA007_Epitope_Rep3 1018.5698972233 1018.56880993586 62.102 2 0.1665364524264376 0.0006531678641410843 0.002065213702192227 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 71031 21155 LYIVEPLKF True PC9_epitope_Rep3 1120.6532329244399 1120.65212993586 86.658 2 0.16653306202131798 0.0006531678641410843 0.002065375196967437 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 142663 21391 YYPNPPLVL True PC9_epitope_Rep2 1074.57498260374 1074.57388993586 87.751 2 0.1665311609027352 0.0006531678641410843 0.0020654657582544734 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 45849 8369 ISDPGVQGY True H1975_Epitope_Rep1 934.43961132974 934.43850993586 37.119 2 0.16653025494411283 0.0006531678641410843 0.0020655089157067034 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 41801 11479 IASPEGQDYLK True PC9_epitope_Rep3 1219.6084675599898 1219.60736993586 49.15 2 0.16652957319376763 0.0006531678641410843 0.0020655413930692175 ['ENSG00000100220|ENST00000216038|RTCB'] 88716 13169 QTHSVFVNV True PC9_epitope_Rep3 1029.5243440132099 1029.5232499358601 55.684 2 0.16652300350673263 0.0006531678641410843 0.0020658543873345895 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 1354 6517 AEEAARLSVAA True H1975_Epitope_Rep2 1086.56693710118 1086.5658499358601 29.981 2 0.16651077628600458 0.0006531678641410843 0.002066437045155476 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 73081 17098 MRENQITISL True PC9_epitope_Rep2 1203.6281574587497 1203.6270699358602 71.017 2 0.16651019514173926 0.0006531678641410843 0.002066464742231459 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 41561 21756 HYTYILEVF True PC9_epitope_Rep1 1183.5913609438696 1183.59026993586 88.518 2 0.16651013163240677 0.0006531678641410843 0.0020664677690803643 ['ENSG00000151012|ENST00000280612|SLC7A11'] 46667 8765 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.54912993586 38.645 2 0.16650804019801732 0.0006531678641410843 0.00206656744912644 ['ENSG00000170348|ENST00000303575|TMED10'] 41217 14719 HVLDVIHEV True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 61.885 2 0.1665046059933397 0.0006531678641410843 0.00206673113749904 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 24013 8279 EYMKHTRLF True PC9_epitope_Rep6 1223.6121134717898 1223.61046490379 41.455 3 0.16650209925481044 0.0006531678641410843 0.002066850627191034 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 3500 18914 [Acetylation]-AGLNSLEAVK True PC9_epitope_Rep3 1042.5658747883201 1042.56476993586 77.973 2 0.16649331285862073 0.0006531678641410843 0.002067269506337375 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 76745 16193 NQVLNLIKA True PC9_epitope_Rep2 1011.6076797143498 1011.60658993586 67.536 2 0.16649116494602373 0.0006531678641410843 0.002067371917976335 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 126550 21698 VLLPEGGITAI True PC9_epitope_Rep1 1081.63831113629 1081.63720993586 88.291 2 0.16648708229732834 0.0006531678641410843 0.0020675665910665835 ['ENSG00000122965|ENST00000261741|RBM19'] 119753 8653 VAYGKGTYF True H1975_Epitope_Rep3 1004.4967322830399 1004.49562993586 38.28 2 0.16648232437643215 0.0006531678641410843 0.0020677934863139 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 42402 6689 IEDGKVVTV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 30.639 2 0.1664810526236504 0.0006531678641410843 0.00206785413774767 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 87712 8327 QRAITGASL True PC9_epitope_Rep1 915.5137793295099 915.51268993586 36.863 2 0.16647192207114647 0.0006531678641410843 0.0020682896371115272 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 132381 16098 VVAELLRTV True PC9_epitope_Rep6 998.61243074162 998.61132993586 74.256 2 0.1664714601803156 0.0006531678641410843 0.0020683116703249867 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 108578 5077 SYNRGDSTF True NCI_RA007_Epitope_Rep4 1045.44648761533 1045.44538993586 26.033 2 0.16647034674154615 0.0006531678641410843 0.002068364784779879 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 22316 13286 ETDLLDIRSEY True H1975_Epitope_Rep3 1352.64597526752 1352.6454749679299 56.362 1 0.16645561111742907 0.0006531678641410843 0.002069067847858866 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 90134 9372 REDEFHISV True H1975_Epitope_Rep2 1130.5356369729 1130.53452993586 41.011 2 0.1664554244691837 0.0006531678641410843 0.0020690767547140378 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA'] 5183 23430 ALMDLLLRL True PC9_epitope_Rep1 1056.63653731448 1056.6354299358602 94.908 2 0.1664536802427587 0.0006531678641410843 0.002069159991060642 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2'] 54347 20714 KYEELFPAF True PC9_epitope_Rep2 1142.5648118428596 1142.56370993586 85.112 2 0.16645146604086697 0.0006531678641410843 0.002069265659960954 ['ENSG00000105402|ENST00000263354|NAPA'] 21735 16825 ERTLATDIL True PC9_epitope_Rep5 1030.56587447202 1030.56476993586 69.727 2 0.16644836741238592 0.0006531678641410843 0.0020694135456274807 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 141381 8819 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43348993586 38.889 2 0.16644206482602988 0.0006531678641410843 0.0020697143765372283 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 134610 22599 VYSLQQFGF True PC9_epitope_Rep1 1087.53384606775 1087.53274993586 91.736 2 0.16644178928906625 0.0006531678641410843 0.0020697275292840467 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 17511 13855 EHFPQAYSV True PC9_epitope_Rep3 1076.49270953176 1076.4916099358602 58.373 2 0.16643421087717097 0.0006531678641410843 0.0020700893172589194 ['ENSG00000076201|ENST00000265562|PTPN23'] 78168 7752 NYARGHYTI True PC9_epitope_Rep1 1093.5304920228102 1093.52938993586 34.639 2 0.16641630653529563 0.0006531678641410843 0.0020709443089460813 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 40423 17816 HQYDGLVEL True PC9_epitope_Rep1 1072.5189242795998 1072.5178299358602 73.324 2 0.16641617501890935 0.0006531678641410843 0.002070950590595715 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 138298 7268 YHDEADQSAL True PC9_epitope_Rep3 1147.47818166643 1147.47708993586 32.966 2 0.1664127303908304 0.0006531678641410843 0.002071115124001566 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 129209 7883 VQTEVNREL True PC9_epitope_Rep1 1086.56693710118 1086.5658499358601 35.15 2 0.1664114566865262 0.0006531678641410843 0.002071175966073305 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 85380 2728 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 14.571 2 0.1664084299448651 0.0006531678641410843 0.0020713205540787137 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 104330 7495 SQIQEFKEA True PC9_epitope_Rep4 1078.5294889632999 1078.52838993586 36.192 2 0.16640726432105693 0.0006531678641410843 0.002071376238833925 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 9944 18680 AYMPHTFFI True PC9_epitope_Rep6 1125.53173789277 1125.53064993586 84.496 2 0.16640089922832677 0.0006531678641410843 0.002071680341586491 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 17126 5905 EGM[Oxidation]NIVEAM[Oxidation]ER True NCI_RA007_Epitope_Rep1 1309.5642376337298 1309.5631299358602 27.021 2 0.16639700290483656 0.0006531678641410843 0.00207186651686273 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 106291 8267 STFNQVVLK True NCI_RA007_Epitope_Rep5 1034.5760452328998 1034.57494993586 38.477 2 0.16639304827142123 0.0006531678641410843 0.002072055495427197 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 140924 9632 YSELASHVVSY True H1975_Epitope_Rep1 1253.59281749585 1253.59172993586 41.977 2 0.1663917986232754 0.0006531678641410843 0.002072115215471814 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 17103 13182 EGLPVALDK True PC9_epitope_Rep5 940.5229470308799 940.52184993586 55.709 2 0.16638279271973777 0.0006531678641410843 0.002072545653884194 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 114951 11298 TQVEASEESAL True PC9_epitope_Rep2 1162.5353621893798 1162.53426993586 48.781 2 0.16638233377812672 0.0006531678641410843 0.002072567591456252 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 18438 20804 EIYKEFFEV True PC9_epitope_Rep3 1202.58594121026 1202.5848499358601 85.294 2 0.16637616113319814 0.0006531678641410843 0.0020728626686388855 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 214 14311 AAFGRDLFL True H1975_Epitope_Rep2 1008.5392658013599 1008.53816993586 60.196 2 0.16637554277192051 0.0006531678641410843 0.0020728922311025358 ['nc|ENSG00000134759|Q6IA86-4|ELP2', 'nc|ENSG00000134759|Q6IA86-2|ELP2', 'nc|ENSG00000134759|Q6IA86-3|ELP2', 'nc|ENSG00000134759|Q6IA86-5|ELP2', 'ENSG00000134759|ENST00000358232|ELP2', 'nc|ENSG00000134759|Q6IA86-6|ELP2', 'ENST00000536373.5_1_18:33718798-33725056:+|nuORF'] 111089 5637 THDQAVQAL True PC9_epitope_Rep4 981.4879585044899 981.48686993586 28.479 2 0.16637320081971077 0.0006531678641410843 0.002073004198398659 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 141379 8810 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43407496793 38.854 1 0.16636559900761383 0.0006531678641410843 0.002073367678036305 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 132586 9076 VVESAYEVIK True NCI_RA007_Epitope_Rep1 1135.6124903112698 1135.6113899358602 39.304 2 0.16636157681915265 0.0006531678641410843 0.002073560024222028 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 100963 13198 SLFNTGFLK True NCI_RA007_Epitope_Rep3 1025.5545815123298 1025.5534899358602 59.185 2 0.1663553434296589 0.0006531678641410843 0.002073858148114084 ['ENSG00000121486|ENST00000367506|TRMT1L'] 85747 18031 QHDFTSQIF True PC9_epitope_Rep1 1121.51417325233 1121.5130699358601 74.148 2 0.16634341252784798 0.0006531678641410843 0.002074428886059832 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 118647 12542 TYSPALNKM[Oxidation]F True PC9_epitope_Rep2 1186.5692459807399 1186.5681499358602 53.549 2 0.16633723394684832 0.0006531678641410843 0.0020747245122473596 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 40180 14126 HQELFPHSL True PC9_epitope_Rep5 1106.55089311422 1106.5497899358602 59.346 2 0.16633254045397117 0.0006531678641410843 0.0020749491096671503 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 11008 4564 DAPQDFHPDR True H1975_Epitope_Rep3 1196.52104953792 1196.51941490379 22.675 3 0.1663293861557801 0.0006531678641410843 0.002075100065759084 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 105352 15619 SRQTQDWVL True PC9_epitope_Rep5 1131.56727145435 1131.5661699358602 65.089 2 0.16632652229354147 0.0006531678641410843 0.0020752371318906904 ['ENSG00000143375|ENST00000271636|CGN', 'CGN|p.K837Nfs*2|1|0.2|ENSG00000143375|chr1:151530686-151530687|GG/-|frameshift_variant', 'CGN|p.K837Mfs*4|1|0.2|ENSG00000143375|chr1:151530684-151530685|-/TGCC|frameshift_variant', 'nc|ENSG00000143375|Q9P2M7-2|CGN'] 5807 10871 APEEHPVLL True PC9_epitope_Rep6 1003.5338460677498 1003.53274993586 52.675 2 0.1663064976273671 0.0006531678641410843 0.002076195777163082 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 20174 11117 ENFVAFVDK True H1975_Epitope_Rep1 1067.5287606873098 1067.52766993586 47.726 2 0.16630604926759304 0.0006531678641410843 0.002076217246656916 ['CON__P02769'] 47765 21434 IYEPNFIFF True NCI_RA007_Epitope_Rep5 1188.5855472874398 1188.5844499358602 89.508 2 0.16630582241971995 0.0006531678641410843 0.0020762281092436435 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 75114 12736 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 53.997 2 0.1663005934149905 0.0006531678641410843 0.0020764785153411015 ['ENSG00000171223|ENST00000302754|JUNB'] 38212 6742 HEAEYYVAA True H1975_Epitope_Rep3 1051.46107505031 1051.45996993586 30.888 2 0.1662928481505151 0.0006531678641410843 0.002076849475343412 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD', 'ENST00000482824.1_1_3:15676934-15683645:+|nuORF'] 53450 9675 KRFDDKYTL True PC9_epitope_Rep3 1184.6189726740397 1184.61733490379 42.163 3 0.166290932222111 0.0006531678641410843 0.002076941249095291 ['ENSG00000118363|ENST00000263672|SPCS2'] 31999 5706 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 26.978 2 0.1662858133758251 0.0006531678641410843 0.0020771864638088875 ['ENSG00000108344|ENST00000264639|PSMD3'] 24763 8559 FASHVSPEV True PC9_epitope_Rep2 971.47124581119 971.47014993586 38.283 2 0.16628487276277515 0.0006531678641410843 0.0020772315263604666 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 99390 16413 SHVDLVVM[Oxidation]V True PC9_epitope_Rep1 1013.52156751233 1013.52046993586 67.955 2 0.1662833213521197 0.0006531678641410843 0.0020773058529195867 ['ENSG00000031698|ENST00000234677|SARS1'] 139917 7784 YQAEAREAL True PC9_epitope_Rep1 1049.5141732523298 1049.5130699358601 34.765 2 0.16628159495119854 0.0006531678641410843 0.0020773885662162318 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 105293 14328 SRMDGEGQLTL True PC9_epitope_Rep3 1205.5710365054497 1205.56992993586 60.198 2 0.1662799400888757 0.0006531678641410843 0.002077467855130546 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 73600 10386 MVVQDGIVKA True PC9_epitope_Rep6 1058.57941636118 1058.57830993586 50.679 2 0.16627619145233688 0.0006531678641410843 0.002077647473601365 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 108313 9962 SYISRTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 43.183 2 0.16627475482662937 0.0006531678641410843 0.0020777163146154147 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 103413 8045 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 36.304 2 0.16627234493552007 0.0006531678641410843 0.0020778317982133566 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 95880 7614 RYLDKTEQW True NCI_RA007_Epitope_Rep1 1237.6091362663299 1237.60750490379 33.609 3 0.16627111453410828 0.0006531678641410843 0.0020778907623488956 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 28886 12791 FTDEEVDEMY True H1975_Epitope_Rep3 1276.4805497352 1276.4794499358602 54.418 2 0.1662619876410031 0.0006531678641410843 0.002078328199780803 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 140674 15669 YRVFTTQEL True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 65.548 2 0.1662560086384545 0.0006531678641410843 0.0020786148137534825 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 43439 12032 IGGIGTVPVGR True PC9_epitope_Rep2 1024.6029286870798 1024.60182993586 51.598 2 0.16624629673745822 0.0006531678641410843 0.0020790804549946596 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 54009 13375 KVFNDYTAV True PC9_epitope_Rep1 1055.52876068731 1055.52766993586 56.306 2 0.16624195364990316 0.0006531678641410843 0.0020792887199294345 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 1051 5705 AEAESM[Oxidation]YQIK True NCI_RA007_Epitope_Rep1 1184.53833977528 1184.53724993586 26.249 2 0.16624052078002904 0.0006531678641410843 0.0020793574351973543 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 72205 15324 MHAETAFESL True PC9_epitope_Rep2 1134.5015599633 1134.50046993586 64.225 2 0.16624009897794484 0.0006531678641410843 0.0020793776637355954 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 101487 22417 SLLDIIEKV True PC9_epitope_Rep2 1028.61176203528 1028.6106699358602 91.72 2 0.16623727822018716 0.0006531678641410843 0.0020795129450479027 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 140375 9705 YRDPYTGQSV True PC9_epitope_Rep6 1184.5462016566 1184.5451099358602 47.725 2 0.16623244214489444 0.0006531678641410843 0.0020797448998729675 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 114569 18014 TQDAVPLTL True PC9_epitope_Rep6 956.51786165044 956.51676993586 81.918 2 0.16622662250915032 0.0006531678641410843 0.0020800240639403888 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 118511 15864 TYQDIQNTI True PC9_epitope_Rep2 1094.52440358286 1094.5233099358602 66.278 2 0.166225770640751 0.0006531678641410843 0.002080064930645997 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 11766 11157 DHDIPQQL True PC9_epitope_Rep2 964.46140940348 964.46030993586 48.241 2 0.1662232691855723 0.0006531678641410843 0.002080184937662329 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 4811 6897 ALEEAMEQK True PC9_epitope_Rep3 1047.4906609264297 1047.4895699358601 31.544 2 0.16621897867604524 0.0006531678641410843 0.002080390790469362 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 24160 12811 EYQELMNVK True PC9_epitope_Rep1 1152.54851015572 1152.54740993586 54.152 2 0.16621634120851403 0.0006531678641410843 0.002080517342679931 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 75683 23445 NLIDLDDLYV True PC9_epitope_Rep3 1191.6023195503901 1191.6012299358601 95.457 2 0.166216297629195 0.0006531678641410843 0.0020805194337880054 ['ENSG00000125676|ENST00000245838|THOC2'] 73324 9114 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 40.046 2 0.16620986320597708 0.0006531678641410843 0.0020808282059223042 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 77338 11197 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 48.108 2 0.16620960666823315 0.0006531678641410843 0.002080840517487005 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 89984 11769 RDIVQFVP True NCI_RA007_Epitope_Rep5 972.53926580136 972.53816993586 51.927 2 0.16620790714239622 0.0006531678641410843 0.0020809220816806035 ['ENSG00000139117|ENST00000331366|CPNE8', 'ENST00000546603.5_1_12:39047686-39073432:-|nuORF', 'nc|ENSG00000139117|Q86YQ8-2|CPNE8', 'ENST00000473373.1_1_20:34214440-34214716:-|nuORF', 'ENST00000514439.1_1_3:131254041-131261643:-|nuORF', 'ENST00000567011.1_1_16:57179810-57181567:+|nuORF', 'ENST00000401607.6_1_20:34214165-34218368:-|nuORF', 'ENST00000460657.1_1_14:24546029-24546936:+|nuORF', 'ENST00000557829.1_1_14:24545691-24546719:+|nuORF', 'ENST00000558995.5_1_14:24543475-24546936:+|nuORF', 'ENSG00000214078|ENST00000397443|CPNE1', 'ENSG00000124772|ENST00000244751|CPNE5', 'nc|ENSG00000124772|Q9HCH3-2|CPNE5', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7', 'ENSG00000085719|ENST00000517490|CPNE3', 'ENSG00000100884|ENST00000689861|CPNE6', 'nc|ENSG00000100884|O95741-2|CPNE6', 'ENSG00000140848|ENST00000290776|CPNE2', 'nc|ENSG00000140848|Q96FN4-2|CPNE2', 'ENSG00000196353|ENST00000429747|CPNE4', 'nc|ENSG00000196353|Q96A23-2|CPNE4', 'ENST00000483495.5_1_20:34214165-34218616:-|nuORF'] 48898 4426 KEDKPPLAP True H1975_Epitope_Rep1 993.5494961318898 993.54838993586 22.035 2 0.1662074083469829 0.0006531678641410843 0.0020809460206381507 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 84239 20784 PYMDSPQSIGF True PC9_epitope_Rep2 1240.5434247752798 1240.5423299358602 85.389 2 0.1662038397529558 0.0006531678641410843 0.0020811172981299963 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 125216 18160 VIIKGLEEI True PC9_epitope_Rep2 1012.6168474157199 1012.61574993586 75.157 2 0.1662029269763339 0.0006531678641410843 0.0020811611098293225 ['ENSG00000138160|ENST00000260731|KIF11'] 77646 17137 NTFTKLITV True PC9_epitope_Rep6 1035.59644632431 1035.5953499358602 78.503 2 0.16619662600935473 0.0006531678641410843 0.0020814635705036486 ['ENSG00000106615|ENST00000262187|RHEB'] 90474 8787 RELDPSLVSA True H1975_Epitope_Rep2 1085.57168812845 1085.5705899358602 38.763 2 0.16619177682160954 0.0006531678641410843 0.0020816963724163326 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 36647 19971 GVIEKLLTS True PC9_epitope_Rep3 958.5698972233 958.56880993586 82.064 2 0.16618944992691315 0.0006531678641410843 0.0020818080922313693 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 140344 12425 YRDPNTIETL True PC9_epitope_Rep2 1220.60371653272 1220.60260993586 53.1 2 0.16617823847214058 0.0006531678641410843 0.002082346465192571 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 103143 11615 SPIENIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 49.555 2 0.16616332333960712 0.0006531678641410843 0.002083062904183556 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 93119 12311 RPNSLVGITSA True PC9_epitope_Rep5 1113.61422164677 1113.6131299358601 52.345 2 0.16616320670570142 0.0006531678641410843 0.0020830685075907463 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 121070 9980 VEQWPYRAVA True H1975_Epitope_Rep1 1217.61930702721 1217.61820993586 43.323 2 0.1661626169422105 0.0006531678641410843 0.0020830968416491844 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3', 'CCT3|p.Q442H|1|0.1|ENSG00000163468|chr1:156311025-156311025|C/A|missense_variant'] 91589 21912 RILDIDIPLSV True PC9_epitope_Rep2 1252.7390878067201 1252.73798993586 89.761 2 0.16616243806308195 0.0006531678641410843 0.0020831054356308014 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 71255 16822 LYPQFMFHL True NCI_RA007_Epitope_Rep3 1194.5895871220598 1194.58848993586 74.042 2 0.16616044173271308 0.0006531678641410843 0.0020832013487589412 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 74882 4939 NHHLQETSF True PC9_epitope_Rep4 1111.50467119779 1111.50356993586 25.601 2 0.16615255070617121 0.0006531678641410843 0.002083580514120748 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 141784 10395 YVDAGTPMY True H1975_Epitope_Rep2 1015.4320834211499 1015.43157496793 44.996 1 0.16614079236973062 0.0006531678641410843 0.002084145632492151 ['ENSG00000155189|ENST00000285518|AGPAT5'] 92875 12366 RPFQGTMGV True PC9_epitope_Rep3 991.4909357099498 991.48982993586 52.596 2 0.16614037553718664 0.0006531678641410843 0.0020841656687275844 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 47767 23794 IYEPNFIFF True PC9_epitope_Rep2 1188.5855472874398 1188.5844499358602 96.996 2 0.16613656834903498 0.0006531678641410843 0.002084348680909429 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 27838 18963 FQDGDTIVNV True PC9_epitope_Rep3 1106.52440358286 1106.5233099358602 78.165 2 0.16613168677198048 0.0006531678641410843 0.002084583362657714 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 105279 13043 SRLPEQVEL True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 58.063 2 0.16612407816217784 0.0006531678641410843 0.00208494919914728 ['ENSG00000177666|ENST00000336615|PNPLA2', 'nc|ENSG00000177666|Q96AD5-2|PNPLA2'] 101614 20397 SLLQTLYKV True PC9_epitope_Rep5 1063.62774645259 1063.62664993586 83.494 2 0.16611329039515527 0.0006531678641410843 0.0020854680056181228 ['ENSG00000100401|ENST00000356244|RANGAP1'] 115168 20048 TRDPLVLEL True PC9_epitope_Rep5 1054.60225998074 1054.60116993586 82.168 2 0.16610084931356664 0.0006531678641410843 0.0020860664837388243 ['FKBP11|p.I85L|1|0.28|ENSG00000134285|chr12:48924591-48924591|T/A|missense_variant'] 35580 4274 GTADVHFER True NCI_RA007_Epitope_Rep5 1030.48320747722 1030.48210993586 23.017 2 0.16609375619507233 0.0006531678641410843 0.0020864077749992954 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 46681 8854 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.5496749679298 39.063 1 0.16608526692403955 0.0006531678641410843 0.0020868163166857584 ['ENSG00000170348|ENST00000303575|TMED10'] 49344 9252 KESDIYIVA True H1975_Epitope_Rep3 1036.54407639828 1036.5429699358601 40.579 2 0.1660839399327882 0.0006531678641410843 0.0020868801846671108 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 106154 4409 STDPAAPNLK True NCI_RA007_Epitope_Rep3 1012.5189242796 1012.51782993586 24.123 2 0.16607785177136394 0.0006531678641410843 0.002087173232435999 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 129132 16853 VQQTVQDLFGR True PC9_epitope_Rep3 1289.67279915205 1289.67170993586 69.978 2 0.16607677036830773 0.0006531678641410843 0.0020872252890303815 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 140678 15059 YRVFTTQEL True PC9_epitope_Rep4 1155.5924235730297 1155.5913299358601 65.853 2 0.16606716106782815 0.0006531678641410843 0.0020876879186831165 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 137731 5708 YENEVALR True NCI_RA007_Epitope_Rep3 992.4927095317598 992.49160993586 29.427 2 0.1660593318813975 0.0006531678641410843 0.0020880649224119144 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 105169 17019 SRFPYYNSL True PC9_epitope_Rep2 1145.55055876105 1145.54946993586 70.713 2 0.16605368157517542 0.0006531678641410843 0.002088337047442804 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 118138 21601 TYIPGTQITF True PC9_epitope_Rep2 1139.58627556343 1139.5851699358602 88.562 2 0.1660491173536191 0.0006531678641410843 0.002088556891317841 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 6381 6161 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 28.682 2 0.1660476831071918 0.0006531678641410843 0.002088625979134012 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 25684 8683 FEQKGFRLV True H1975_Epitope_Rep1 1122.6185787512197 1122.61693490379 38.331 3 0.16603884050090645 0.0006531678641410843 0.002089051978974498 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 141400 13632 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep2 1147.5107280451098 1147.5096299358602 57.574 2 0.16603326153671435 0.0006531678641410843 0.0020893207948626306 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 105014 19063 SRDLFTYTV True PC9_epitope_Rep3 1100.55022440788 1100.54912993586 78.549 2 0.16602837761066078 0.0006531678641410843 0.0020895561495378016 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 54325 9393 KYDPNVYSI True NCI_RA007_Epitope_Rep4 1097.53932537101 1097.53822993586 42.984 2 0.16601772748779434 0.0006531678641410843 0.00209006946713366 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 118160 14864 TYIPVPAKI True PC9_epitope_Rep6 1000.5957180483199 1000.59462993586 69.151 2 0.16600834086287541 0.0006531678641410843 0.002090521990830128 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 65779 7929 LSDGVAVLK True NCI_RA007_Epitope_Rep1 900.5280324113199 900.52692993586 34.835 2 0.16600744659412017 0.0006531678641410843 0.002090565108114185 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 49036 8211 KEGEFTLSA True H1975_Epitope_Rep2 980.4814761417199 980.48036993586 36.536 2 0.16600264100464315 0.0006531678641410843 0.0020907968254616485 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 27851 13688 FQDKDQVFI True PC9_epitope_Rep6 1138.56587447202 1138.56476993586 64.436 2 0.16600176137715983 0.0006531678641410843 0.0020908392423823643 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 9283 8056 AVQEFGLAR True NCI_RA007_Epitope_Rep5 989.5294293936498 989.52832993586 37.678 2 0.16599488406566604 0.0006531678641410843 0.002091170906038331 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 86189 18294 QIFNGTFVKL True PC9_epitope_Rep6 1165.64954452633 1165.64844993586 83.01 2 0.16599145797133436 0.0006531678641410843 0.00209133615171118 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 22300 9676 ETDKNGFLQY True H1975_Epitope_Rep1 1213.5615173675699 1213.5604299358602 42.143 2 0.16598333252549566 0.0006531678641410843 0.0020917281063608365 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 7717 5039 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 24.471 2 0.16597082330000384 0.0006531678641410843 0.0020923316690223685 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 14912 15333 DYAYLREHF True PC9_epitope_Rep4 1212.5563724174797 1212.55471490379 66.911 3 0.1659701881563373 0.0006531678641410843 0.0020923623189695543 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 72234 20674 MHFLENISL True PC9_epitope_Rep2 1102.5481162329 1102.5470099358602 84.959 2 0.16596858909584686 0.0006531678641410843 0.002092439486364381 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 92212 21417 RLIESLFTI True PC9_epitope_Rep2 1090.63864548946 1090.63754993586 87.853 2 0.16596773377255092 0.0006531678641410843 0.002092480763688562 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 88990 20049 QVIPQFQTV True PC9_epitope_Rep5 1058.5760452328998 1058.57494993586 82.172 2 0.16594815321438505 0.0006531678641410843 0.0020934259308691304 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 95148 6426 RVFSWSQAK True NCI_RA007_Epitope_Rep5 1107.58252759567 1107.5814299358601 31.387 2 0.16593526886281995 0.0006531678641410843 0.00209404810032627 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 128479 6660 VPSLQGEKA True PC9_epitope_Rep3 927.5025459394699 927.50144993586 30.642 2 0.1659252725958231 0.0006531678641410843 0.002094530935093685 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 118461 16605 TYPKIWVKV True PC9_epitope_Rep3 1132.66446631448 1132.66282490379 69.008 3 0.16592486073453275 0.0006531678641410843 0.0020945508310022927 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 11647 10007 DGNASGTTLLE True H1975_Epitope_Rep1 1076.49858275784 1076.4974899358601 43.429 2 0.1659245712224781 0.0006531678641410843 0.0020945648166622523 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 40427 16357 HQYDGLVEL True PC9_epitope_Rep4 1072.5189242795998 1072.5178299358602 70.881 2 0.1659146580952315 0.0006531678641410843 0.0020950437533224847 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 89552 19526 QYLTFKPQTF True PC9_epitope_Rep1 1271.6550238295897 1271.65392993586 79.927 2 0.16591451398379456 0.0006531678641410843 0.0020950507166401207 ['ENSG00000109586|ENST00000265000|GALNT7'] 29039 8956 FTEQYNEQY True H1975_Epitope_Rep3 1220.4985827578398 1220.4974899358601 39.444 2 0.16590740268400966 0.0006531678641410843 0.0020953943561368396 ['ENSG00000173914|ENST00000310046|RBM4B'] 141343 9326 YTDTYTEAY True H1975_Epitope_Rep3 1125.4502355830898 1125.44967496793 40.869 1 0.16590725551909333 0.0006531678641410843 0.00209540146818549 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 77903 21023 NVIESFTEL True PC9_epitope_Rep4 1050.5233409537 1050.5222499358601 89.027 2 0.16590421182885623 0.0006531678641410843 0.002095548566216415 ['nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'ENSG00000197562|ENST00000248139|RAB40C'] 6951 7482 AQITGTEHL True PC9_epitope_Rep2 968.49270953176 968.49160993586 34.152 2 0.16590074935401317 0.0006531678641410843 0.002095715916176064 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 89883 7745 RAYTSETYL True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 34.773 2 0.16589933430341106 0.0006531678641410843 0.0020957843129122433 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 28166 8383 FRDQNPEQL True PC9_epitope_Rep2 1145.5465360097699 1145.54542993586 37.617 2 0.16589768051816195 0.0006531678641410843 0.0020958642517606724 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 44432 14367 ILHENFTTV True PC9_epitope_Rep5 1072.55530978832 1072.5542099358602 60.263 2 0.16589722620499403 0.0006531678641410843 0.002095886212383547 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 55018 9021 KYQPRIAVF True NCI_RA007_Epitope_Rep4 1120.6393141958 1120.63820993586 41.532 2 0.16589322005892526 0.0006531678641410843 0.0020960798717218746 ['ENSG00000139372|ENST00000392872|TDG'] 90875 4912 REVEHFLKA True H1975_Epitope_Rep3 1127.60874234351 1127.60710490379 24.021 3 0.1658923441531004 0.0006531678641410843 0.0020961222158819635 ['ENSG00000141526|ENST00000582743|SLC16A3'] 108202 17325 SYGSVFKAI True PC9_epitope_Rep1 970.5123823471799 970.51128993586 71.454 2 0.16588910505002205 0.0006531678641410843 0.0020962788121766693 ['ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 8161 3467 ATEQPLTAK True NCI_RA007_Epitope_Rep4 957.5131106231698 957.51200993586 19.272 2 0.16588760919776538 0.0006531678641410843 0.00209635113395931 ['ENSG00000120725|ENST00000394817|SIL1'] 28275 18631 FRNIPGITL True PC9_epitope_Rep4 1029.5971150306498 1029.5960099358601 79.742 2 0.16588753681199628 0.0006531678641410843 0.002096354633745128 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 24855 17016 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 70.276 2 0.16588275570415908 0.0006531678641410843 0.002096585808877683 ['ENSG00000204592|ENST00000376630|HLA-E'] 134605 17665 VYSKDNPNLLF True PC9_epitope_Rep2 1308.67140216972 1308.6703099358601 73.229 2 0.16588086008720737 0.0006531678641410843 0.002096677472410375 ['ENSG00000174231|ENST00000304992|PRPF8'] 48960 15950 KEENSPPWIVF True H1975_Epitope_Rep2 1344.67140216972 1344.6703099358601 66.55 2 0.1658800797275763 0.0006531678641410843 0.002096715208265922 ['ENST00000496230.5_1_1:155247534-155253965:+|nuORF', 'ENSG00000143630|ENST00000368358|HCN3'] 105601 11375 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45877496793 48.803 1 0.16587492068941395 0.0006531678641410843 0.002096964700990641 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 113896 7740 TNQELQEINR True PC9_epitope_Rep5 1243.61567819875 1243.61458993586 34.713 2 0.16587049161429523 0.0006531678641410843 0.002097178916149587 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 38951 9044 HHINDTDTIL True PC9_epitope_Rep2 1177.57275075761 1177.57111490379 40.134 3 0.16585985272373066 0.0006531678641410843 0.0020976935625551087 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 1643 6208 AEFTVETR True H1975_Epitope_Rep3 951.4661604307499 951.46506993586 28.892 2 0.16585351149531202 0.0006531678641410843 0.0020980003736214775 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 13961 13441 DRDGTIIHL True PC9_epitope_Rep1 1038.54580773378 1038.54470993586 56.56 2 0.165847572235795 0.0006531678641410843 0.0020982877766993146 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7061038-7061341:+|nuORF', 'ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 12012 19126 DHSFSLEL True PC9_epitope_Rep4 946.4396113297399 946.43850993586 81.661 2 0.1658469030737191 0.0006531678641410843 0.002098320160179595 ['ENSG00000128272|ENST00000674920|ATF4'] 116240 19626 TTDFIFNLY True H1975_Epitope_Rep1 1132.54407639828 1132.5429699358601 81.701 2 0.1658418909760877 0.0006531678641410843 0.0020985627319009656 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 4729 15021 ALDENGNLWY True H1975_Epitope_Rep2 1193.53530261973 1193.5342099358602 62.928 2 0.16584063687895095 0.0006531678641410843 0.0020986234311334328 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1'] 36903 19531 GVLPNIQAV True PC9_epitope_Rep4 909.5283667644899 909.52726993586 83.247 2 0.16583497851112403 0.0006531678641410843 0.002098897322164282 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 47118 15165 ITVEKIIKI True PC9_epitope_Rep2 1055.69543208959 1055.6943299358602 63.59 2 0.1658306991247623 0.0006531678641410843 0.0020991044878835687 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 90076 5360 REAEFTKSIA True NCI_RA007_Epitope_Rep4 1150.59823722946 1150.5971499358602 27.185 2 0.1658283194670232 0.0006531678641410843 0.0020992196963071615 ['ENSG00000118363|ENST00000263672|SPCS2'] 1478 13377 AEEIPLKILA True H1975_Epitope_Rep3 1095.6539612004299 1095.65286993586 56.718 2 0.16582111627551366 0.0006531678641410843 0.0020995684691652 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'IGF2BP2|p.A393Lfs*38|1|0.5|ENSG00000073792|chr3:185672565-185672565|G/-|frameshift_variant', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 70388 4764 LVTEDVM[Oxidation]R True H1975_Epitope_Rep3 977.4851820036099 977.48408993586 23.451 2 0.16580400110890356 0.0006531678641410843 0.002100397404430489 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI|p.K57N|1|0.06|ENSG00000105220|chr19:34366393-34366393|G/C|missense_variant'] 138376 13752 YHGEVPVSL True PC9_epitope_Rep2 999.5025459394699 999.50144993586 58.184 2 0.1658026418850342 0.0006531678641410843 0.002100463249457063 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 39465 17976 HLDATKLLL True PC9_epitope_Rep1 1022.61243074162 1022.61132993586 73.937 2 0.16579454894530699 0.0006531678641410843 0.002100855339324178 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 40463 17968 HRDFISVTL True PC9_epitope_Rep3 1086.5821932425 1086.58108993586 74.319 2 0.16579196930400877 0.0006531678641410843 0.0021009803341603384 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000545096.1_1_9:139981559-139982655:+|nuORF'] 8040 7242 ATDPNILGR True NCI_RA007_Epitope_Rep2 955.50869394907 955.50758993586 32.789 2 0.16578252698649015 0.0006531678641410843 0.002101437918914733 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 103021 21256 SPFQFTVGP True PC9_epitope_Rep1 978.4810822188999 978.48053496793 86.584 1 0.16578057366885332 0.0006531678641410843 0.0021015325912031586 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 132815 17733 VVLEEIPKL True PC9_epitope_Rep6 1038.6324974798597 1038.6314099358601 80.843 2 0.16577877700498195 0.0006531678641410843 0.0021016196746508546 ['ENSG00000116266|ENST00000370008|STXBP3', 'STXBP3|p.G375Wfs*3|1|0.32|ENSG00000116266|chr1:108796243-108796244|-/T|frameshift_variant'] 1650 7044 AEFVEVTK True NCI_RA007_Epitope_Rep2 921.4807478657299 921.4801949679301 32.023 1 0.16577397537068939 0.0006531678641410843 0.0021018524252983837 ['CON__P02769'] 84237 21060 PYMDSPQSIGF True PC9_epitope_Rep1 1240.5434247752798 1240.5423299358602 85.838 2 0.16577109050895408 0.0006531678641410843 0.0021019922762119956 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 46878 5442 ITLEEEM[Oxidation]TK True H1975_Epitope_Rep3 1108.53219176568 1108.53108993586 25.991 2 0.1657689298142283 0.0006531678641410843 0.002102097027405451 ['ENSG00000185624|ENST00000331483|P4HB'] 106319 8999 STFSEIFKK True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 41.272 2 0.1657662668015532 0.0006531678641410843 0.0021022261383189544 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 67988 10068 LTDFIQKY True H1975_Epitope_Rep1 1026.53859709502 1026.53750993586 43.667 2 0.16576267926936447 0.0006531678641410843 0.0021024000852710957 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 71323 22965 LYQFNPAFF True PC9_epitope_Rep5 1145.5545815123298 1145.5534899358602 93.325 2 0.16576099902319502 0.0006531678641410843 0.00210248155950902 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 57664 4921 LEEERTPTP True H1975_Epitope_Rep3 1070.52440358286 1070.5233099358602 24.056 2 0.1657532232039888 0.0006531678641410843 0.002102858645930945 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 64806 5139 LQDAEIAR True NCI_RA007_Epitope_Rep1 914.4821448480599 914.48104993586 24.073 2 0.1657484423842975 0.0006531678641410843 0.002103090524160599 ['ENSG00000197956|ENST00000368719|S100A6'] 76066 7666 NMEADPGQY True H1975_Epitope_Rep3 1023.3967605415899 1023.3956699358599 34.469 2 0.16573836959315116 0.0006531678641410843 0.0021035791560577548 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 44570 19154 ILPKELQTW True PC9_epitope_Rep1 1126.6386454894598 1126.63754993586 78.47 2 0.16573651354082003 0.0006531678641410843 0.0021036692056868515 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 76918 17096 NRDPILVSL True PC9_epitope_Rep4 1025.58694426977 1025.58584993586 73.759 2 0.16573352302142141 0.0006531678641410843 0.0021038143040797426 ['ENSG00000106789|ENST00000375077|CORO2A'] 114503 11320 TQAEQTLNV True PC9_epitope_Rep1 1002.49818883502 1002.49708993586 48.421 2 0.1657311827980628 0.0006531678641410843 0.0021039278574371033 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 13896 10348 DQVANSAFVER True PC9_epitope_Rep1 1234.59421447818 1234.5931099358602 44.685 2 0.16572793656872017 0.0006531678641410843 0.0021040853825646166 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 107963 6090 SVYGYGVQK True NCI_RA007_Epitope_Rep4 999.5025459394698 999.50144993586 30.041 2 0.16572590615459062 0.0006531678641410843 0.0021041839155605687 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 11679 10444 DGTGVVEFVR True H1975_Epitope_Rep3 1077.5454733806098 1077.54436993586 45.232 2 0.1657178984767798 0.0006531678641410843 0.002104572561301953 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 6393 4871 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 26.264 2 0.16571760665703517 0.0006531678641410843 0.00210458672587702 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 54381 12671 KYFDEHYEY True PC9_epitope_Rep5 1292.53496826656 1292.5338699358601 53.743 2 0.16571220276597484 0.0006531678641410843 0.0021048490413938005 ['ENSG00000123975|ENST00000314355|CKS2'] 31940 5115 GENPIYKSA True NCI_RA007_Epitope_Rep4 977.4818104948899 977.48070993586 26.188 2 0.16571103561667694 0.0006531678641410843 0.002104905701412034 ['ENSG00000150093|ENST00000302278|ITGB1'] 88655 4408 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 22.063 2 0.16568920901933093 0.0006531678641410843 0.0021059655686495662 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 10159 7449 AYVHM[Oxidation]VTHF True PC9_epitope_Rep4 1119.5171508382302 1119.51604993586 36.006 2 0.16567719629611968 0.0006531678641410843 0.002106549116308112 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 21713 21268 ERSPLLFTL True PC9_epitope_Rep1 1074.60734536118 1074.6062499358602 86.632 2 0.16566851214145945 0.0006531678641410843 0.002106971071211148 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 128960 21632 VQIPFFAKL True PC9_epitope_Rep3 1061.62735252977 1061.6262499358602 88.506 2 0.16566646464623605 0.0006531678641410843 0.0021070705693867976 ['ENSG00000188641|ENST00000370192|DPYD'] 14456 8766 DTENQTLNY True H1975_Epitope_Rep3 1096.46728262956 1096.46618993586 38.725 2 0.16566256168657473 0.0006531678641410843 0.002107260247000399 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217'] 40727 5685 HRTDSEIAL True PC9_epitope_Rep6 1040.5250722892 1040.5239699358601 29.984 2 0.1656617487165574 0.0006531678641410843 0.002107299758194547 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 36863 20748 GVLKVFLENV True PC9_epitope_Rep4 1116.6542955536 1116.6531899358602 87.963 2 0.16565218540785936 0.0006531678641410843 0.002107764600617022 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 127278 18782 VMAPRALLL True PC9_epitope_Rep2 982.5997578829398 982.59866993586 77.616 2 0.16564871110683235 0.0006531678641410843 0.002107933500871381 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 45472 20811 IQLPSEKAIFL True PC9_epitope_Rep3 1257.7332741502898 1257.7321699358602 85.321 2 0.1656386127283199 0.0006531678641410843 0.002108424501968453 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 76441 15872 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 65.86 2 0.165636157290513 0.0006531678641410843 0.002108543906995446 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 105739 20235 SSFPRFYFV True PC9_epitope_Rep4 1148.5654805492 1148.5643899358602 85.975 2 0.16562942652267187 0.0006531678641410843 0.0021088712509153952 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 88245 6022 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep3 1128.43935401 1128.43824993586 28.177 2 0.16561656236236658 0.0006531678641410843 0.0021094970273760963 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 72046 19284 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 80.038 2 0.16561498058216303 0.0006531678641410843 0.0021095739858139084 ['ENSG00000198712|ENST00000361739|MT-CO2'] 23833 19175 EYIKFLRSI True PC9_epitope_Rep5 1167.6651945904698 1167.66355490379 78.794 3 0.1656105388866518 0.0006531678641410843 0.0021097901028734375 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 78164 16850 NYAQVLDKF True PC9_epitope_Rep6 1096.5553097883198 1096.5542099358602 77.329 2 0.16560721233495104 0.0006531678641410843 0.0021099519755094632 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 42267 18852 IDTIEIITDR True PC9_epitope_Rep3 1187.63976768827 1187.6386699358602 77.737 2 0.1656070594335518 0.0006531678641410843 0.0021099594161109072 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105446 10623 SRVAVVNQI True PC9_epitope_Rep3 984.5716285588001 984.57052993586 45.81 2 0.16560208438552312 0.0006531678641410843 0.002110201529906338 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 29374 20750 FVDPAQITM True PC9_epitope_Rep1 1020.49501803088 1020.49392993586 84.642 2 0.16559965095969031 0.0006531678641410843 0.0021103199641976413 ['ENSG00000167325|ENST00000300738|RRM1'] 105423 19122 SRSWLSYSY True PC9_epitope_Rep1 1147.5298233164701 1147.5287299358602 78.343 2 0.1655992230151141 0.0006531678641410843 0.0021103407928515887 ['ENSG00000189091|ENST00000302516|SF3B3'] 101262 22832 SLIADLEQL True PC9_epitope_Rep2 1000.5440763982799 1000.54357496793 93.312 1 0.16559858737004676 0.0006531678641410843 0.0021103717309548403 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 4744 9697 ALDHAGYSGLY True H1975_Epitope_Rep2 1165.54038800017 1165.53928993586 42.282 2 0.16559426022024468 0.0006531678641410843 0.00211058235394891 ['ENSG00000107201|ENST00000379883|RIGI', 'ENST00000379868.5_1_9:32491415-32526182:-|nuORF'] 25526 8747 FEIEPDKEC True H1975_Epitope_Rep1 1108.47467650912 1108.47356993586 38.576 2 0.16558982651640353 0.0006531678641410843 0.0021107981852340075 ['ENSG00000100941|ENST00000216832|PNN'] 142674 14207 YYPSTPGRYSI True PC9_epitope_Rep2 1302.6244519773 1302.62334993586 59.915 2 0.16558403174713815 0.0006531678641410843 0.002111080306015093 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 90328 5639 REFDRRFSP True NCI_RA007_Epitope_Rep4 1208.6050539453997 1208.60341490379 28.29 3 0.1655777442307329 0.0006531678641410843 0.002111386459040537 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 28077 10169 FQTEVGKQL True PC9_epitope_Rep2 1048.5553097883198 1048.5542099358602 44.452 2 0.1655763606367607 0.0006531678641410843 0.0021114538352375 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 98528 16994 SFMPNSPRF True PC9_epitope_Rep1 1081.5015003936498 1081.50040993586 70.191 2 0.16557137132777025 0.0006531678641410843 0.00211169681502161 ['ENSG00000160326|ENST00000371899|SLC2A6', 'nc|ENSG00000160326|Q9UGQ3-2|SLC2A6', 'ENST00000485978.1_1_9:136338979-136343630:-|nuORF'] 108488 14786 SYMGHFDLL True NCI_RA007_Epitope_Rep1 1081.49026700361 1081.4891699358602 61.573 2 0.16556721904364272 0.0006531678641410843 0.002111899052934677 ['ENSG00000169976|ENST00000367569|SF3B5'] 116750 13883 TVDNVQPLLY True H1975_Epitope_Rep3 1160.607739284 1160.60717496793 58.71 1 0.16555653545433935 0.0006531678641410843 0.0021124194885134514 ['ENSG00000145332|ENST00000273963|KLHL8'] 130977 8410 VTDMSDAEQY True H1975_Epitope_Rep2 1157.45466934053 1157.45356993586 37.302 2 0.16554899118815924 0.0006531678641410843 0.0021127870737506827 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 94955 10860 RTLAEIAKV True PC9_epitope_Rep1 999.6076797143498 999.60658993586 46.659 2 0.16554617846180789 0.0006531678641410843 0.0021129241368019512 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 28260 19656 FRMDIEQSL True PC9_epitope_Rep3 1137.54884450889 1137.54774993586 80.842 2 0.1655400726451163 0.0006531678641410843 0.0021132217014471957 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 139062 10269 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.5333749679298 44.444 1 0.16553999665934446 0.0006531678641410843 0.0021132254048486987 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 21549 9741 ERNLQSDVL True PC9_epitope_Rep4 1072.55128703704 1072.55018993586 45.106 2 0.1655384112496534 0.0006531678641410843 0.002113302676171335 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 42262 12147 IDTIEIITDR True NCI_RA007_Epitope_Rep4 1187.63976768827 1187.6386699358602 53.721 2 0.16553722284521416 0.0006531678641410843 0.002113360599697339 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 116548 19552 TTVDHFWGL True PC9_epitope_Rep4 1074.51344497634 1074.5123499358601 83.328 2 0.1655184491731156 0.0006531678641410843 0.002114275850048772 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'SUN1|p.D153Y|1|0.2|ENSG00000164828|chr7:843211-843211|G/T|missense_variant', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.E401Kfs*45|1|0.12|ENSG00000164828|chr7:853555-853555|G/-|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 31655 9401 GEFRQGLISA True NCI_RA007_Epitope_Rep1 1076.56145779792 1076.56036993586 40.56 2 0.16550701322971784 0.0006531678641410843 0.002114833567104474 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 84263 21550 PYNPILGETF True PC9_epitope_Rep3 1149.57062549929 1149.5695299358601 88.187 2 0.16549342869689143 0.0006531678641410843 0.002115496259382859 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 57147 4814 LDTNADKQLS True NCI_RA007_Epitope_Rep4 1103.54586730343 1103.5447699358601 24.951 2 0.16547875384091495 0.0006531678641410843 0.002116212374003406 ['ENSG00000163220|ENST00000368738|S100A9'] 75772 19545 NLLQVLEKV True PC9_epitope_Rep6 1054.63864548946 1054.63754993586 87.843 2 0.16547766312432446 0.0006531678641410843 0.0021162656092837497 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 24762 9586 FASHVSPEV True PC9_epitope_Rep1 971.47124581119 971.47014993586 41.729 2 0.16547334588102014 0.0006531678641410843 0.002116476336790026 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 138598 6268 YIDQEELNK True NCI_RA007_Epitope_Rep2 1150.5506183307 1150.55007496793 28.987 1 0.16547307620471025 0.0006531678641410843 0.0021164895005654867 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 78396 18388 NYLHLDYNF True PC9_epitope_Rep6 1197.5454733806098 1197.54436993586 83.373 2 0.16546399407214002 0.0006531678641410843 0.0021169328767167974 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 40222 19628 HQIDLIVQL True PC9_epitope_Rep4 1077.61824439805 1077.6171499358602 83.615 2 0.1654605915297164 0.0006531678641410843 0.0021170990076668397 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 98255 10175 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 44.183 2 0.16545616817985134 0.0006531678641410843 0.002117314999571341 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 54966 7890 KYQEVTNNL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 35.714 2 0.16545111128009965 0.0006531678641410843 0.0021175619546673972 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 27881 12434 FQDPYTRSL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 59.256 2 0.16544964272033041 0.0006531678641410843 0.002117633677584747 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 131034 5028 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 24.42 3 0.1654477386682892 0.0006531678641410843 0.002117726673103175 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 54003 21682 KVFELDLVTL True PC9_epitope_Rep2 1175.6801759482698 1175.67906993586 88.876 2 0.16544711934136516 0.0006531678641410843 0.002117756922435983 ['ENSG00000117724|ENST00000366955|CENPF'] 17600 11787 EHINEGETAML True PC9_epitope_Rep2 1242.55505208814 1242.5539499358601 50.671 2 0.16544605027513842 0.0006531678641410843 0.002117809139073591 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 24575 8077 FAHTNVESL True NCI_RA007_Epitope_Rep2 1016.4927095317599 1016.49160993586 36.051 2 0.16544523293094518 0.0006531678641410843 0.0021178490616645808 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 73714 19614 MYSDVWKQL True PC9_epitope_Rep2 1168.5586809166 1168.55758993586 80.83 2 0.16544323784588894 0.0006531678641410843 0.002117946513323103 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 36648 18334 GVIEKLLTS True PC9_epitope_Rep4 958.5698972233 958.56880993586 78.589 2 0.16544062315442737 0.0006531678641410843 0.0021180742369810157 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 286 12938 AAGSPVFL True H1975_Epitope_Rep2 760.41194002992 760.41139496793 54.88 1 0.16543851106561297 0.0006531678641410843 0.002118177414894647 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 50058 6138 KKFLKPYTL True NCI_RA007_Epitope_Rep1 1136.69576644276 1136.69413490379 27.912 3 0.16543731607568735 0.0006531678641410843 0.0021182357937219697 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 21212 10234 ERDPATYNI True PC9_epitope_Rep5 1077.5090878718902 1077.50798993586 44.353 2 0.16543666604710136 0.0006531678641410843 0.0021182675502355057 ['ENSG00000138246|ENST00000260818|DNAJC13'] 90708 4322 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 21.741 2 0.16543418980986085 0.0006531678641410843 0.0021183885287545555 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 21950 9955 ESEDPNYYQY True H1975_Epitope_Rep3 1306.49897668066 1306.49786993586 43.325 2 0.16543263353904147 0.0006531678641410843 0.0021184645651248922 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2'] 12130 8636 DIDIHEVR True PC9_epitope_Rep3 995.5036085686299 995.50250993586 38.17 2 0.16542972320145682 0.0006531678641410843 0.0021186067658903376 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 54321 20575 KYDEIFYNL True PC9_epitope_Rep5 1203.5811901829898 1203.58008993586 84.189 2 0.16542585847911873 0.0006531678641410843 0.0021187956131924457 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 78608 21154 NYSPYVNYF True PC9_epitope_Rep1 1165.50802524273 1165.50747496793 86.201 1 0.16542411693602846 0.0006531678641410843 0.0021188807181346464 ['ENSG00000156162|ENST00000414645|DPY19L4'] 47283 7555 IVDKSGVVRV True PC9_epitope_Rep1 1070.64479349906 1070.64368993586 33.878 2 0.16541542841859178 0.0006531678641410843 0.0021193053557429778 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000571079.1_1_17:7497531-7497639:-|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 90282 8642 REELSNVLA True H1975_Epitope_Rep2 1029.5454733806098 1029.54436993586 38.2 2 0.16539272805633562 0.0006531678641410843 0.0021204152017565564 ['ENSG00000130255|ENST00000347512|RPL36'] 115252 12753 TREEGTPLTL True PC9_epitope_Rep3 1115.5822528121498 1115.5811499358601 54.073 2 0.16539168168602073 0.0006531678641410843 0.002120466373974147 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 36901 20243 GVLPNIQAV True PC9_epitope_Rep2 909.5283667644899 909.52726993586 83.285 2 0.16538537419255211 0.0006531678641410843 0.002120774864944191 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 83288 13167 PTDEITVYY True H1975_Epitope_Rep2 1099.50735653639 1099.50624993586 55.771 2 0.16538213027007606 0.0006531678641410843 0.0021209335382736077 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000474340.1_1_9:95003027-95004705:-|nuORF'] 104076 17551 SQDSFYRVL True PC9_epitope_Rep3 1113.54547338061 1113.54436993586 72.695 2 0.16537777535999074 0.0006531678641410843 0.0021211465731486535 ['ENSG00000143179|ENST00000367879|UCK2', 'UCK2|p.S70L|1|0.15|ENSG00000143179|chr1:165890313-165890313|C/T|missense_variant'] 77336 11260 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 48.356 1 0.16537246455370427 0.0006531678641410843 0.0021214063978085194 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 77644 18160 NTFTKLITV True PC9_epitope_Rep4 1035.59644632431 1035.5953499358602 77.916 2 0.1653526020566389 0.0006531678641410843 0.0021223784280837844 ['ENSG00000106615|ENST00000262187|RHEB'] 4209 5644 AIAQAESLRYK True NCI_RA007_Epitope_Rep5 1248.6826355597598 1248.68098490379 28.398 3 0.16535200141239495 0.0006531678641410843 0.0021224078293283384 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 24852 10929 FAYDGKDYL True NCI_RA007_Epitope_Rep4 1090.4971262058598 1090.4960299358602 48.9 2 0.16535149824503828 0.0006531678641410843 0.002122432459439933 ['ENSG00000204592|ENST00000376630|HLA-E'] 107951 7213 SVYDGHGGEEV True PC9_epitope_Rep4 1147.47818166643 1147.47708993586 35.05 2 0.16534961789795935 0.0006531678641410843 0.0021225245052183335 ['ENSG00000115241|ENST00000344034|PPM1G'] 28400 16307 FRYPTTEEL True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 67.721 2 0.16534211366649768 0.0006531678641410843 0.0021228918882234215 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 96091 14870 RYLVISEKL True PC9_epitope_Rep5 1119.66519459047 1119.6640899358601 62.2 2 0.16533980015908242 0.0006531678641410843 0.0021230051629156778 ['ENSG00000116212|ENST00000371370|LRRC42'] 34793 13950 GQGQIYVHL True PC9_epitope_Rep2 1013.5294293936499 1013.52832993586 58.936 2 0.16533399180604968 0.0006531678641410843 0.002123289579989546 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 111141 20792 THFLQPIYL True PC9_epitope_Rep1 1130.6124307416198 1130.61132993586 84.807 2 0.1653283926106623 0.0006531678641410843 0.002123563791319869 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 54332 12076 KYDPNVYSI True PC9_epitope_Rep6 1097.53932537101 1097.53822993586 57.771 2 0.1653252403889633 0.0006531678641410843 0.0021237181817377144 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 133993 6922 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5281849037901 33.31 3 0.16532094297614972 0.0006531678641410843 0.0021239286797313716 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 134357 12379 VYPEKLATKF True PC9_epitope_Rep5 1194.6648602372995 1194.66322490379 52.612 3 0.16532057910738174 0.0006531678641410843 0.0021239465038885787 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 25711 13274 FESEFVHIV True H1975_Epitope_Rep2 1105.54441075145 1105.5433099358602 56.188 2 0.1653205401606446 0.0006531678641410843 0.00212394841170824 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 138604 7350 YIDQEELNK True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 33.652 2 0.16530696620316712 0.0006531678641410843 0.002124613441164272 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 138280 13246 YHAQMPDSL True PC9_epitope_Rep3 1060.46478053176 1060.4636899358602 55.984 2 0.16530532804736414 0.0006531678641410843 0.002124693713474535 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 91065 20742 RFLNDPGHLLW True PC9_epitope_Rep1 1366.7146043943799 1366.7135099358602 84.612 2 0.1653029686048621 0.0006531678641410843 0.002124809335339626 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 118294 21475 TYLPTSPLL True PC9_epitope_Rep3 1003.55899818643 1003.55790993586 87.895 2 0.16529940880542165 0.0006531678641410843 0.0021249837912704914 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 75096 12538 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 53.098 2 0.16529875212543044 0.0006531678641410843 0.0021250159749060735 ['ENSG00000171223|ENST00000302754|JUNB'] 5066 20189 ALLDRIVSV True PC9_epitope_Rep3 984.59678067748 984.59568993586 82.915 2 0.16529547638313696 0.0006531678641410843 0.002125176525063108 ['ENSG00000155561|ENST00000285968|NUP205'] 114574 16857 TQDGNIYQL True PC9_epitope_Rep2 1050.4981888350198 1050.49708993586 70.088 2 0.1652952300476596 0.0006531678641410843 0.002125188598908325 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 39144 7220 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.54013490379 33.16 3 0.165292265085664 0.0006531678641410843 0.0021253339284317482 ['ENSG00000156482|ENST00000287038|RPL30'] 133994 7012 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5281849037901 33.652 3 0.16528751544625053 0.0006531678641410843 0.002125566755775017 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 25713 12106 FESEFVHVV True H1975_Epitope_Rep2 1091.5287606873098 1091.52766993586 51.649 2 0.16528723673016196 0.0006531678641410843 0.0021255804192308195 ['nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B', 'ENST00000587410.1_1_18:77132833-77134205:+|nuORF', 'ENST00000588921.1_3_18:77132616-77137380:+|nuORF'] 84126 18953 PYADQVFRI True PC9_epitope_Rep2 1107.57129420563 1107.57018993586 78.267 2 0.16527755377769301 0.0006531678641410843 0.0021260551596327666 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ-CACNG4|1|fusion'] 28152 15733 FRDHLEEVL True PC9_epitope_Rep1 1156.58767254576 1156.58602490379 65.34 3 0.16527476746625633 0.0006531678641410843 0.002126191787874341 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 77748 12906 NTPEYMEKI True PC9_epitope_Rep3 1123.52196105471 1123.5208699358602 54.664 2 0.1652729600717449 0.0006531678641410843 0.002126280419104971 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 14167 17892 DSDPFSSFY True H1975_Epitope_Rep2 1063.41345615155 1063.4123499358602 74.142 2 0.16526972908519644 0.0006531678641410843 0.002126438869817192 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF'] 9620 21101 AYANIISQF True PC9_epitope_Rep2 1025.5181960036098 1025.51767496793 86.624 1 0.16526754046100545 0.0006531678641410843 0.0021265462087751413 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 14240 15994 DSLIFLVDASK True NCI_RA007_Epitope_Rep1 1206.6496040959798 1206.6485099358601 66.316 2 0.1652673853798692 0.0006531678641410843 0.002126553814785073 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant', 'ENST00000464116.2_1_22:42018008-42024264:+|nuORF'] 76773 10760 NRAAAQYYL True PC9_epitope_Rep2 1068.53524305008 1068.5341499358601 46.707 2 0.1652660193826061 0.0006531678641410843 0.0021266208117853938 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 20054 14967 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.4841499358602 62.723 2 0.16525753482428787 0.0006531678641410843 0.002127036994546307 ['ENSG00000182195|ENST00000370526|LDOC1'] 41109 12102 HTVEDLVKV True PC9_epitope_Rep2 1038.5709598524597 1038.5698699358602 51.86 2 0.16524937614620344 0.0006531678641410843 0.0021274372690905183 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 29705 19962 FVLPVATQI True PC9_epitope_Rep6 986.58006798418 986.57896993586 89.447 2 0.16524008052512795 0.0006531678641410843 0.0021278934151978913 ['ENSG00000111678|ENST00000229281|C12orf57'] 2546 12966 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.49657496793 54.95 1 0.1652390495387615 0.0006531678641410843 0.0021279440128289333 ['ENSG00000123607|ENST00000243344|TTC21B'] 134257 18646 VYNENLVHMI True PC9_epitope_Rep2 1230.60669373818 1230.60558993586 77.087 2 0.1652384064903028 0.0006531678641410843 0.002127975572273005 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 136809 16537 YAAELIERV True PC9_epitope_Rep1 1062.57095985246 1062.5698699358602 68.432 2 0.165228054704748 0.0006531678641410843 0.002128483680184534 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 22305 9694 ETDKNGFLQY True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 42.309 2 0.1652226478264249 0.0006531678641410843 0.0021287491200711935 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 116545 20656 TTVDHFWGL True PC9_epitope_Rep1 1074.51344497634 1074.5123499358601 84.275 2 0.16521757706353693 0.0006531678641410843 0.002128998089112669 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'SUN1|p.D153Y|1|0.2|ENSG00000164828|chr7:843211-843211|G/T|missense_variant', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.E401Kfs*45|1|0.12|ENSG00000164828|chr7:853555-853555|G/-|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 45018 10644 IPEVFLTK True H1975_Epitope_Rep1 945.5535188831699 945.55242993586 45.899 2 0.16519585489440056 0.0006531678641410843 0.0021300649538977976 ['CON__Q3MHN5', 'CON__ENSEMBL:ENSBTAP00000018229'] 127722 13217 VPAPSPLSA True PC9_epitope_Rep1 837.45961849833 837.4590749679301 55.702 1 0.16519378051144307 0.0006531678641410843 0.0021301668633013117 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 7106 15908 AQVALVNEV True PC9_epitope_Rep4 941.51819600361 941.51708993586 69.117 2 0.16518883639255327 0.0006531678641410843 0.002130409775524169 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 35379 6534 GSDCTTIHY True H1975_Epitope_Rep2 995.4018459220301 995.40074993586 30.044 2 0.16518784642468531 0.0006531678641410843 0.002130458417507036 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.Y236C|2|0.45|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 134776 16847 VYTTTVHWL True PC9_epitope_Rep6 1118.5760452329 1118.57494993586 77.316 2 0.16518755453980166 0.0006531678641410843 0.002130472759456683 ['ENSG00000174231|ENST00000304992|PRPF8'] 2158 5797 AELQSRLAA True H1975_Epitope_Rep2 957.5243440132099 957.52324993586 27.287 2 0.16518692806821417 0.0006531678641410843 0.0021305035418629947 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 99045 20056 SHFEGLITTI True PC9_epitope_Rep5 1116.58152453616 1116.5804299358601 82.199 2 0.16518316059248095 0.0006531678641410843 0.002130688670519542 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 9888 21363 AYLKAIVLF True PC9_epitope_Rep5 1036.6321035570397 1036.6310099358602 87.232 2 0.16518296813296107 0.0006531678641410843 0.0021306981281515 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 68381 7957 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 35.554 2 0.16518237862170343 0.0006531678641410843 0.0021307270975200808 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 134254 12435 VYNENLVHMI True NCI_RA007_Epitope_Rep5 1230.60669373818 1230.60558993586 54.488 2 0.1651809116431025 0.0006531678641410843 0.0021307991885119873 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 27392 23019 FLVPTFEQL True PC9_epitope_Rep5 1092.5855472874398 1092.5844499358602 93.535 2 0.16516967102806504 0.0006531678641410843 0.002131351661334951 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 96211 14328 RYPTSIASL True PC9_epitope_Rep2 1006.5447451046199 1006.54364993586 60.376 2 0.16516849335873987 0.0006531678641410843 0.0021314095517121355 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 115187 8445 TRDPQVNAF True PC9_epitope_Rep2 1046.5145076054998 1046.5134099358602 37.852 2 0.16516146186818098 0.0006531678641410843 0.0021317552295317876 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 90129 7960 REDDLNVSV True H1975_Epitope_Rep1 1045.50400249145 1045.50290993586 35.567 2 0.16514631798205096 0.0006531678641410843 0.0021324999143068806 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9'] 11980 18231 DHNYQSYIL True PC9_epitope_Rep3 1151.52473793603 1151.52364993586 75.338 2 0.165139536468639 0.0006531678641410843 0.0021328334724386258 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 106256 15270 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.55917496793 63.894 1 0.1651385295171326 0.0006531678641410843 0.002132883005190462 ['ENSG00000131459|ENST00000253778|GFPT2'] 115793 6783 TSDHFETIM[Oxidation]KY True H1975_Epitope_Rep2 1386.6125673447 1386.6114699358602 31.007 2 0.16512337124807097 0.0006531678641410843 0.002133628791566468 ['ENSG00000136628|ENST00000366923|EPRS1'] 4701 14938 ALATLIHQV True PC9_epitope_Rep4 964.5705659296401 964.56946993586 65.4 2 0.16511780375075058 0.0006531678641410843 0.0021339027777179807 ['ENSG00000111652|ENST00000543155|COPS7A'] 98691 10557 SGFEGMFTK True NCI_RA007_Epitope_Rep3 1002.4480678384599 1002.44696993586 48.581 2 0.16511677397182273 0.0006531678641410843 0.0021339534587704583 ['ENSG00000153201|ENST00000283195|RANBP2'] 138542 15236 YHYDMNTASL True PC9_epitope_Rep1 1213.5073736197298 1213.50626993586 63.425 2 0.1651110535188962 0.0006531678641410843 0.0021342350154506845 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1'] 45400 9584 IQESNFDRV True PC9_epitope_Rep2 1106.5356369729 1106.53452993586 42.209 2 0.1651011135664761 0.0006531678641410843 0.0021347243412672854 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 76958 8057 NRDVPNETL True PC9_epitope_Rep1 1056.51998690876 1056.5188899358602 35.813 2 0.165091578308917 0.0006531678641410843 0.002135193850086597 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.V235A|1|0.18|ENSG00000205339|chr11:9417126-9417126|T/C|missense_variant', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 105557 5175 SSDDIKETGY True H1975_Epitope_Rep2 1113.4825983405299 1113.48150993586 24.981 2 0.16509096083525016 0.0006531678641410843 0.0021352242575782233 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000575116.1_1_17:1555319-1557183:-|nuORF', 'ENST00000576585.1_1_17:1556769-1557303:-|nuORF'] 262 13358 AAGGVGSIVRV True PC9_epitope_Rep1 984.5716285588 984.57052993586 56.241 2 0.1650908696975161 0.0006531678641410843 0.00213522874569273 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 29523 16583 FVHDLVLYL True H1975_Epitope_Rep2 1117.6171817688898 1117.6160899358601 69.012 2 0.16508868778453825 0.0006531678641410843 0.002135336197693806 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 48005 18218 IYLDTHFRL True PC9_epitope_Rep4 1176.6291434349198 1176.6274949037902 78.144 3 0.16508206856404778 0.0006531678641410843 0.0021356622054954436 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 17812 7340 EHSTEGSVSL True PC9_epitope_Rep5 1044.47236801 1044.4712699358602 33.193 2 0.16507970138528216 0.0006531678641410843 0.0021357788051305647 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 105042 19499 SRDPIIFSV True PC9_epitope_Rep5 1032.56039516876 1032.55928993586 80.056 2 0.16507625283706612 0.0006531678641410843 0.002135948680945722 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000565049.1_1_16:33499109-33500962:-|nuORF', 'ENST00000554269.1_1_15:20362738-20365460:+|nuORF'] 11837 8050 DHHENKYLL True PC9_epitope_Rep1 1167.56727145435 1167.56563490379 35.786 3 0.16507292798566203 0.0006531678641410843 0.0021361124762331006 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 77532 11732 NTDIAENLY True H1975_Epitope_Rep2 1051.48220441771 1051.4816749679298 50.2 1 0.16507227925542794 0.0006531678641410843 0.002136144436705813 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 120257 16417 VEDAFVPVIKF True H1975_Epitope_Rep2 1262.6910749851397 1262.68996993586 68.368 2 0.16507123411671668 0.0006531678641410843 0.0021361959277228213 ['ENSG00000115421|ENST00000238714|PAPOLG', 'nc|ENSG00000115421|Q9BWT3-2|PAPOLG'] 11855 15654 DHIAHIIEL True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 65.489 2 0.1650529528634515 0.0006531678641410843 0.0021370967938566243 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 36133 9955 GVAPFTIAR True NCI_RA007_Epitope_Rep1 930.5287011176599 930.52760993586 42.727 2 0.16505107045805403 0.0006531678641410843 0.002137189576854325 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 134602 19436 VYSIVPQSW True PC9_epitope_Rep6 1077.54949613189 1077.54838993586 87.421 2 0.16505006847608025 0.0006531678641410843 0.0021372389657811426 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 116258 11899 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 50.77 1 0.1650492389332683 0.0006531678641410843 0.0021372798558323904 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 49203 5049 KEMPTVAQA True NCI_RA007_Epitope_Rep4 973.4902670036098 973.48916993586 25.918 2 0.16503928214419578 0.0006531678641410843 0.0021377707096345024 ['RASL12|p.K239N|1|0.28|ENSG00000103710|chr15:65054983-65054983|C/A|missense_variant', 'nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 78466 20530 NYMPGQLTI True PC9_epitope_Rep5 1035.5059170677498 1035.50480993586 84.011 2 0.16502941545822303 0.0006531678641410843 0.0021382572326649305 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 11731 5765 DHASIQM[Oxidation]NV True PC9_epitope_Rep2 1029.45494450449 1029.45384993586 27.568 2 0.1650269843039073 0.0006531678641410843 0.0021383771290780073 ['ENSG00000171858|ENST00000343986|RPS21'] 140361 13064 YRDPTTVTTL True PC9_epitope_Rep5 1165.59790287629 1165.5968099358602 55.257 2 0.1650191055850478 0.0006531678641410843 0.0021387657273668876 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 90330 5011 REFDRRFSP True NCI_RA007_Epitope_Rep5 1208.6050539453997 1208.60341490379 25.978 3 0.16501622819978684 0.0006531678641410843 0.0021389076648643877 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 77078 8476 NRLENDGATAL True PC9_epitope_Rep2 1172.5785644140399 1172.57746993586 37.969 2 0.16500971723272928 0.0006531678641410843 0.002139228876766759 ['ENSG00000100401|ENST00000356244|RANGAP1'] 117313 6772 TVNDLPVGR True NCI_RA007_Epitope_Rep2 969.5243440132099 969.52324993586 30.956 2 0.16500542237104074 0.0006531678641410843 0.0021394407857715857 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 114925 10226 TQTAVITRI True PC9_epitope_Rep2 1001.5869442697699 1001.58584993586 44.67 2 0.1650051455169961 0.0006531678641410843 0.002139454446504168 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 4316 23201 AIIPYIPTL True PC9_epitope_Rep1 999.60046907559 999.59936993586 94.039 2 0.16498313667483716 0.0006531678641410843 0.0021405407017542287 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 90952 5448 REYQLNDSAA True NCI_RA007_Epitope_Rep5 1165.53636524889 1165.53526993586 27.642 2 0.16497799967240995 0.0006531678641410843 0.0021407943199225257 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 107088 12174 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 51.686 2 0.16497015291503922 0.0006531678641410843 0.002141181778979007 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 103406 5997 SPPPPPPPP True NCI_RA007_Epitope_Rep5 881.4647038787699 881.46360993586 29.751 2 0.1649635030997835 0.0006531678641410843 0.00214151019001851 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 138856 13008 YKDGTELEL True PC9_epitope_Rep2 1066.51825557326 1066.51714993586 55.32 2 0.16494144911941552 0.0006531678641410843 0.002142599719174996 ['ENSG00000143815|ENST00000272163|LBR'] 4732 9153 ALDFIASK True H1975_Epitope_Rep3 863.47526856247 863.47416993586 40.196 2 0.16494130771542762 0.0006531678641410843 0.002142606706720418 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 17416 4761 EHDPVGQM[Oxidation]V True PC9_epitope_Rep4 1026.4440454676198 1026.44294993586 24.881 2 0.16493536715910279 0.0006531678641410843 0.0021429002827230647 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 32819 7846 GHLEKAVVL True PC9_epitope_Rep2 964.5705659296399 964.56946993586 35.549 2 0.16492783189630686 0.0006531678641410843 0.002143272725282631 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 76370 7870 NQADKAINTAV True PC9_epitope_Rep1 1143.5884008217502 1143.58730993586 35.097 2 0.1649246731375351 0.0006531678641410843 0.0021434288712949977 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 7339 21550 ARPPWMWVL True PC9_epitope_Rep4 1154.60590589254 1154.6048099358602 91.073 2 0.16492102354374052 0.0006531678641410843 0.0021436092947733063 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 68101 14308 LTDPAIVKV True PC9_epitope_Rep3 954.57498260374 954.57388993586 60.122 2 0.16491467493467793 0.0006531678641410843 0.0021439231845425985 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 111321 12910 THNIIVNQL True PC9_epitope_Rep2 1050.5821932425 1050.58108993586 54.955 2 0.16490915208593235 0.0006531678641410843 0.002144196284201443 ['ENSG00000198356|ENST00000357332|GET3'] 1108 4738 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 23.316 1 0.16490161026193847 0.0006531678641410843 0.00214456927645063 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 8797 10363 AVDPTSGQLY True H1975_Epitope_Rep2 1049.50293986229 1049.5023749679299 44.871 1 0.16489934896838268 0.0006531678641410843 0.0021446811247631797 ['ENSG00000132182|ENST00000254508|NUP210', 'NUP210|p.K1258R|1|0.07|ENSG00000132182|chr3:13335524-13335524|T/C|missense_variant'] 44962 18880 IPADLRIISA True PC9_epitope_Rep3 1067.63389446219 1067.63278993586 77.846 2 0.16489859712811406 0.0006531678641410843 0.002144718313648281 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 114570 18019 TQDAVPLTL True PC9_epitope_Rep6 956.51786165044 956.51731496793 81.938 1 0.16489042739516088 0.0006531678641410843 0.002145122461338761 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 141979 19558 YVISEGFLKA True PC9_epitope_Rep1 1125.60701100801 1125.6059099358602 80.054 2 0.16487968104635983 0.0006531678641410843 0.0021456541873098233 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 134637 15097 VYSQFITQL True NCI_RA007_Epitope_Rep3 1097.5757108797297 1097.57460993586 66.87 2 0.16487847959519725 0.0006531678641410843 0.002145713642924778 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 53647 16296 KSADEVLFTGV True PC9_epitope_Rep6 1164.6026539035602 1164.60154993586 75.045 2 0.16487765781156133 0.0006531678641410843 0.0021457543110705206 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 22382 5991 ETEEGAHDLY True H1975_Epitope_Rep2 1162.4778473132599 1162.4767499358602 28.023 2 0.1648758341411809 0.0006531678641410843 0.002145844562994869 ['ENST00000431534.5_1_22:41925289-41928713:-|nuORF', 'nc|ENSG00000100413|Q9Y535-2|POLR3H', 'ENSG00000100413|ENST00000355209|POLR3H'] 58964 15720 LETVILGLLK True H1975_Epitope_Rep1 1097.7059967732898 1097.7048899358601 65.762 2 0.16487050984252782 0.0006531678641410843 0.002146108079801727 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 96971 12494 SAYEFYHAL True NCI_RA007_Epitope_Rep1 1099.49746055903 1099.49636993586 52.578 2 0.16486031731840523 0.0006531678641410843 0.0021466126311155114 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 26334 18489 FHQESAVWL True PC9_epitope_Rep1 1115.5399940773498 1115.5388899358602 75.908 2 0.16485911823217772 0.0006531678641410843 0.0021466719961926767 ['ENST00000314423.11_1_16:69166475-69170710:+|nuORF'] 5806 12910 APEEHPVLL True PC9_epitope_Rep5 1003.5338460677498 1003.53274993586 54.67 2 0.16485705448807966 0.0006531678641410843 0.0021467741731111454 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 72359 22166 MISLEIPQV True PC9_epitope_Rep5 1028.55761828744 1028.55652993586 90.299 2 0.16485593149323655 0.0006531678641410843 0.0021468297751442615 ['ENSG00000111231|ENST00000228827|GPN3', 'nc|ENSG00000111231|Q9UHW5-2|GPN3', 'nc|ENSG00000111231|Q9UHW5-3|GPN3'] 103073 4833 SPGLQKEAV True PC9_epitope_Rep4 927.5025459394699 927.50144993586 25.174 2 0.16485446252596142 0.0006531678641410843 0.0021469025092338404 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 76449 15869 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 66.189 2 0.16484805372189648 0.0006531678641410843 0.0021472198620224848 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 6355 5666 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 26.87 2 0.16484318036175005 0.0006531678641410843 0.002147461213695336 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 129307 21200 VQWENSFVSV True PC9_epitope_Rep2 1193.57168812845 1193.5705899358602 87.004 2 0.16484293953493676 0.0006531678641410843 0.0021474731412728493 ['ENSG00000174231|ENST00000304992|PRPF8'] 15001 14143 DYKESFNTI True PC9_epitope_Rep4 1115.5135045459901 1115.5124099358602 62.305 2 0.16484249459674843 0.0006531678641410843 0.0021474951781740147 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 86180 9797 QIFNGTFVK True NCI_RA007_Epitope_Rep3 1052.5654805492 1052.5643899358602 45.599 2 0.16484122497647816 0.0006531678641410843 0.0021475580611769332 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 95625 17544 RYALQMEQL True PC9_epitope_Rep1 1150.5804789903398 1150.57938993586 72.276 2 0.16484085668678933 0.0006531678641410843 0.0021475763025356996 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 40323 12251 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5439899358599 52.434 2 0.16483822380136548 0.0006531678641410843 0.002147706713651245 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 54880 17640 KYPHYFPVM True PC9_epitope_Rep1 1180.57393705792 1180.57282993586 72.646 2 0.1648345594879432 0.0006531678641410843 0.0021478882262557734 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 93355 10980 RPYEPINSI True PC9_epitope_Rep6 1087.56620882519 1087.5651099358602 53.127 2 0.16483068006446652 0.0006531678641410843 0.002148080411097574 ['ENSG00000115207|ENST00000264720|GTF3C2'] 92187 7802 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 36.712 2 0.16483058710229664 0.0006531678641410843 0.0021480850166112893 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 104331 8667 SQIQEFKEA True PC9_epitope_Rep5 1078.5294889632999 1078.52838993586 38.281 2 0.1648290825034546 0.0006531678641410843 0.0021481595585267784 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 95887 7445 RYLDKTEQW True NCI_RA007_Epitope_Rep4 1237.6091362663299 1237.60750490379 35.28 3 0.16482144742584662 0.0006531678641410843 0.0021485378608750135 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 32562 6003 GGGQIIPTAR True H1975_Epitope_Rep3 968.5403284305199 968.53922993586 28.103 2 0.16481200820866235 0.0006531678641410843 0.002149005646679139 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 68092 4604 LTDNGRHITY True H1975_Epitope_Rep3 1188.58873517492 1188.5870849037901 22.832 3 0.16481143554150637 0.0006531678641410843 0.0021490340300163026 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.A516Qfs*19|1|0.53|ENSG00000103197|chr16:2064373-2064373|G/-|frameshift_variant'] 138853 13895 YKDGTELEL True PC9_epitope_Rep1 1066.51825557326 1066.51714993586 58.284 2 0.16481080652849095 0.0006531678641410843 0.002149065206478265 ['ENSG00000143815|ENST00000272163|LBR'] 104689 10091 SQTTVYEKL True PC9_epitope_Rep1 1067.54989005471 1067.5487899358602 43.687 2 0.16480870057804145 0.0006531678641410843 0.0021491695893009178 ['ENSG00000118193|ENST00000367350|KIF14'] 99384 10276 SHTSVGNIL True PC9_epitope_Rep2 926.48214484806 926.48104993586 44.858 2 0.16480371695555474 0.0006531678641410843 0.0021494166260235116 ['ENSG00000160190|ENST00000352133|SLC37A1', 'ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'nc|ENSG00000134955|Q8TED4-3|SLC37A2', 'ENST00000526405.5_1_11:124933263-124955028:+|nuORF'] 28164 9509 FRDQNPEQL True PC9_epitope_Rep1 1145.5465360097699 1145.54542993586 41.431 2 0.16480072538725155 0.0006531678641410843 0.002149564930830723 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 17541 18378 EHGNFLITV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 76.022 2 0.16479989959774297 0.0006531678641410843 0.002149605870542139 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 132472 10578 VVDGAFKEV True PC9_epitope_Rep2 962.50729696674 962.50618993586 46.005 2 0.16479975306972683 0.0006531678641410843 0.002149613134962271 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 85219 8937 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.374 2 0.16479924993716058 0.0006531678641410843 0.002149638078954629 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 68168 6173 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 28.814 2 0.16479320810666687 0.0006531678641410843 0.002149937639655887 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 56629 15216 LDIDSPPITAR True PC9_epitope_Rep3 1196.6401020414398 1196.63900993586 63.673 2 0.16477701714957224 0.0006531678641410843 0.0021507406111497813 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 118920 5287 VADPETRTV True PC9_epitope_Rep3 986.50327421546 986.50216993586 25.415 2 0.16477579696079958 0.0006531678641410843 0.002150801137124422 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 107921 12176 SVVTGGVQSV True PC9_epitope_Rep1 931.49746055903 931.49636993586 51.693 2 0.16477508586229442 0.0006531678641410843 0.0021508364110830367 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 97359 12097 SEDIRIQLV True H1975_Epitope_Rep2 1071.5924235730301 1071.5913299358601 51.613 2 0.1647693378744304 0.0006531678641410843 0.0021511215605824977 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 52831 12140 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 51.558 2 0.16476799595005487 0.0006531678641410843 0.0021511881369822225 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 27463 13379 FM[Oxidation]DPASALY True H1975_Epitope_Rep2 1029.44773386573 1029.4471749679299 56.597 1 0.16476175066880833 0.0006531678641410843 0.002151498008920296 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 23840 23195 EYINFLENL True PC9_epitope_Rep2 1153.5655401188499 1153.56444993586 94.701 2 0.164751634601041 0.0006531678641410843 0.002152000032233897 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 86334 21031 QIYDIFQKL True PC9_epitope_Rep2 1166.6335601090198 1166.6324699358602 86.348 2 0.1647506762344444 0.0006531678641410843 0.0021520475985221826 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 106290 8499 STFNQVVLK True NCI_RA007_Epitope_Rep4 1034.5760452328998 1034.57494993586 39.493 2 0.16474799564302586 0.0006531678641410843 0.00215218064899913 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 88261 7194 QSDVIHQSVY True H1975_Epitope_Rep2 1174.56185172074 1174.56074993586 32.606 2 0.16474616538048964 0.0006531678641410843 0.002152271498340891 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 45598 10509 IQVTKVTQV True PC9_epitope_Rep3 1014.6073453611799 1014.60624993586 45.361 2 0.1647314882065994 0.0006531678641410843 0.0021530001726794232 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 53061 10558 KPNPNQIISV True PC9_epitope_Rep6 1108.62405805448 1108.62296993586 51.413 2 0.1647244779701609 0.0006531678641410843 0.002153348295321237 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 44764 12937 IMDENNQWY True H1975_Epitope_Rep2 1211.49172355559 1211.4906299358602 54.876 2 0.16471891716834353 0.0006531678641410843 0.002153624480236449 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'nc|ENSG00000085224|P46100-6|ATRX'] 7336 22719 ARPPWMWVL True PC9_epitope_Rep1 1154.60590589254 1154.6048099358602 92.193 2 0.16471788840074642 0.0006531678641410843 0.002153675579283603 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 53804 9826 KTDLDLDGY True H1975_Epitope_Rep3 1038.48695544498 1038.4858499358602 42.822 2 0.1647167793268622 0.0006531678641410843 0.0021537306685141247 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 115264 14680 TREGETIIEL True PC9_epitope_Rep6 1159.6084675599898 1159.60736993586 68.396 2 0.16471523986665365 0.0006531678641410843 0.0021538071379619407 ['nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 93050 8383 RPNDIM[Oxidation]AEV True PC9_epitope_Rep1 1059.50189469691 1059.5007899358602 37.082 2 0.16471261579088867 0.0006531678641410843 0.0021539374896620547 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 71275 21536 LYPSIIQEF True PC9_epitope_Rep4 1108.580461907 1108.57987496793 91.017 1 0.16470636441703573 0.0006531678641410843 0.0021542480601851118 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 26181 10277 FHDESTQVQL True PC9_epitope_Rep6 1202.5567663402999 1202.5556699358601 50.217 2 0.16470478433704527 0.0006531678641410843 0.0021543265662194405 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 56089 15449 LATRALPEL True PC9_epitope_Rep1 982.5811306133398 982.58002993586 64.245 2 0.16470441207582234 0.0006531678641410843 0.002154345062378004 ['ENSG00000173801|ENST00000393931|JUP'] 77841 11045 NVELDPEIQ True H1975_Epitope_Rep2 1055.51350454599 1055.51297496793 47.514 1 0.16470390331966817 0.0006531678641410843 0.00215437034067583 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 62189 18937 LLEPFVHQV True PC9_epitope_Rep5 1080.59678067748 1080.59568993586 77.864 2 0.1647034853107195 0.0006531678641410843 0.0021543911102871543 ['nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2', 'IP6K2|p.Y298Vfs*5|1|0.17|ENSG00000068745|chr3:48688662-48688663|-/C|frameshift_variant', 'ENSG00000068745|ENST00000328631|IP6K2'] 63572 12364 LMDRPIFY True H1975_Epitope_Rep3 1053.5317378927698 1053.53064993586 52.744 2 0.16470277249405577 0.0006531678641410843 0.0021544265284715734 ['ENSG00000141012|ENST00000268695|GALNS', 'ENST00000568613.5_1_16:88880849-88909575:-|nuORF'] 74888 4639 NHHLQETSF True PC9_epitope_Rep6 1111.50467119779 1111.50356993586 25.156 2 0.1646987284829137 0.0006531678641410843 0.0021546274768972644 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 109896 6396 TEFPAKAVA True H1975_Epitope_Rep2 932.4967322830398 932.49562993586 29.526 2 0.1646953115538947 0.0006531678641410843 0.002154797279980632 ['nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A'] 5077 22377 ALLELLHEL True PC9_epitope_Rep5 1049.61209638845 1049.61098993586 91.084 2 0.1646894942149071 0.0006531678641410843 0.0021550864013650207 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF', 'ENSG00000161904|ENST00000293760|LEMD2'] 89049 19840 QVLPHLLEV True PC9_epitope_Rep2 1046.6124307416198 1046.61132993586 81.706 2 0.16468877086458417 0.0006531678641410843 0.002155122354541443 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 92988 8878 RPKPIITSV True PC9_epitope_Rep1 1009.62841515893 1009.62730993586 38.988 2 0.16468660915641567 0.0006531678641410843 0.0021552298029760596 ['ENSG00000168802|ENST00000448552|CHTF8'] 86324 15306 QITVNDLPVGR True PC9_epitope_Rep5 1210.6669854956199 1210.6658899358602 63.884 2 0.16467691115220456 0.0006531678641410843 0.0021557119114547683 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 135204 7734 WESPSPPKP True H1975_Epitope_Rep2 1023.5025459394699 1023.50144993586 34.701 2 0.16465428925477307 0.0006531678641410843 0.0021568369132892364 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 49844 9859 KIAPNTPQL True PC9_epitope_Rep2 980.5654805492 980.56438993586 43.256 2 0.1646514209919989 0.0006531678641410843 0.0021569795957988008 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 111531 18862 TIAEGLTLAQV True PC9_epitope_Rep6 1114.62338934814 1114.6222899358602 85.202 2 0.16465041099484104 0.0006531678641410843 0.002157029840627432 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 35289 14755 GRHGVFLEL True PC9_epitope_Rep2 1026.5610638750998 1026.5599699358602 62.021 2 0.16464627762590464 0.0006531678641410843 0.0021572354775695737 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 47810 9562 IYGEKTYAF True NCI_RA007_Epitope_Rep3 1090.5335117145798 1090.5324099358602 44.697 2 0.16464462670263658 0.0006531678641410843 0.00215731761721256 ['ENSG00000242550|ENST00000238508|SERPINB10'] 106146 13062 STDLQDYTYY True H1975_Epitope_Rep1 1267.52446315251 1267.52387496793 55.33 1 0.1646445122984724 0.0006531678641410843 0.0021573233093659192 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 102879 8407 SPAGPVLSIR True H1975_Epitope_Rep1 995.57637958607 995.57528993586 37.266 2 0.16464390286740424 0.0006531678641410843 0.0021573536317241082 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 78239 18932 NYGQYFTLW True NCI_RA007_Epitope_Rep3 1190.53965972418 1190.53856993586 82.755 2 0.16464374503106935 0.0006531678641410843 0.002157361484970291 ['ENSG00000109929|ENST00000264027|SC5D'] 48394 9338 IYTSSVNRL True PC9_epitope_Rep2 1051.56620882519 1051.5651099358602 41.257 2 0.1646381030180038 0.0006531678641410843 0.0021576422256497146 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 93466 18883 RQIDQFLVV True PC9_epitope_Rep4 1116.62914343492 1116.6280499358602 80.719 2 0.16463703319135486 0.0006531678641410843 0.0021576954632254028 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 125075 12082 VIDWHNYGY True H1975_Epitope_Rep2 1165.51925863277 1165.5181699358602 51.557 2 0.16463573906201695 0.0006531678641410843 0.0021577598644870765 ['nc|ENSG00000033011|Q9BT22-2|ALG1', 'ENSG00000033011|ENST00000262374|ALG1', 'ALG1|p.N171Tfs*21|1|0.14|ENSG00000033011|chr16:5075504-5075504|C/-|frameshift_variant'] 115205 15038 TRDSLPVSL True PC9_epitope_Rep2 986.53965972418 986.53856993586 63.099 2 0.16463516200115477 0.0006531678641410843 0.0021577885820565513 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 77033 18943 NRIQDLLEL True PC9_epitope_Rep6 1112.61897267404 1112.6178699358602 85.51 2 0.1646337933939916 0.0006531678641410843 0.002157856692641329 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 58560 9269 LEQLRPVTV True H1975_Epitope_Rep3 1053.61824439805 1053.6171499358602 40.646 2 0.16463240576261357 0.0006531678641410843 0.002157925752185913 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENST00000470686.1_1_X:17156958-17165601:+|nuORF', 'ENST00000469714.1_1_X:17092694-17165601:+|nuORF'] 46838 10383 ITIFEKQEY True H1975_Epitope_Rep3 1169.5968402471299 1169.59574993586 44.994 2 0.16463087315438488 0.0006531678641410843 0.002158002029496143 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 24116 13444 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep4 1300.57578791316 1300.57468993586 59.609 2 0.16462036591540102 0.0006531678641410843 0.0021585250432389473 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 54044 11203 KVIDPATATSV True PC9_epitope_Rep3 1100.607739284 1100.60664993586 48.098 2 0.16461795198863136 0.0006531678641410843 0.0021586452179991945 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 11598 14667 DGFIDLM[Oxidation]ELK True H1975_Epitope_Rep1 1195.5794763112701 1195.57836993586 61.631 2 0.16461755341721995 0.0006531678641410843 0.0021586650610935483 ['ENSG00000142634|ENST00000375980|EFHD2', 'nc|ENSG00000115468|Q9BUP0-2|EFHD1', 'ENSG00000115468|ENST00000264059|EFHD1'] 74870 13604 NHHLFTTTI True PC9_epitope_Rep5 1082.5508931142201 1082.5497899358602 57.35 2 0.16461721972406893 0.0006531678641410843 0.00215868167432867 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 141428 6486 YTETEPYHNY True H1975_Epitope_Rep2 1315.5356965425499 1315.5351749679298 29.865 1 0.16461603685042808 0.0006531678641410843 0.0021587405658623745 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 93117 10693 RPNSLVGITSA True PC9_epitope_Rep4 1113.61422164677 1113.6131299358601 48.884 2 0.16460610861330588 0.0006531678641410843 0.002159234924669322 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 48233 14603 IYQGRLWAF True NCI_RA007_Epitope_Rep5 1152.60801406752 1152.6069099358601 62.838 2 0.16460511556539387 0.0006531678641410843 0.0021592843779387138 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 24032 20062 EYNNIFHTF True PC9_epitope_Rep1 1183.52982331647 1183.5287299358602 81.995 2 0.16460069480743802 0.0006531678641410843 0.002159504543123903 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 17499 7064 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.5352099358602 32.139 2 0.16459620597706673 0.0006531678641410843 0.0021597281214516717 ['ENSG00000162378|ENST00000294353|ZYG11B'] 90343 7213 REFKQFVEA True NCI_RA007_Epitope_Rep4 1152.5927579262 1152.5916699358602 34.378 2 0.1645942861778482 0.0006531678641410843 0.0021598237493038715 ['ENSG00000102921|ENST00000262384|N4BP1', 'ENST00000564124.5_1_16:48580029-48653834:-|nuORF'] 101507 22011 SLLDRFLATV True PC9_epitope_Rep4 1133.6444591458899 1133.6433699358602 92.886 2 0.1645940939746668 0.0006531678641410843 0.002159833323443036 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 41086 7670 HTQGPVDGSLY True H1975_Epitope_Rep3 1172.5462016565998 1172.5451099358602 34.485 2 0.16459313356363806 0.0006531678641410843 0.0021598811646439038 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 97254 11975 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.4596499358602 51.067 2 0.16458806438495163 0.0006531678641410843 0.002160133694492618 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 35147 9090 GQWKKGFVL True NCI_RA007_Epitope_Rep4 1061.6022004110898 1061.6011099358602 41.797 2 0.16458302177504044 0.0006531678641410843 0.002160384930053569 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 142619 13205 YYMKDLPTSF True NCI_RA007_Epitope_Rep5 1263.58456131127 1263.5834699358602 57.474 2 0.1645828018384453 0.0006531678641410843 0.002160395888514908 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 136446 15605 WVDSDQLLY True H1975_Epitope_Rep3 1137.53423999057 1137.5331499358601 65.441 2 0.16457931359797362 0.0006531678641410843 0.0021605696994365033 ['ENSG00000116221|ENST00000360840|MRPL37'] 11966 15457 DHNINLVSM True PC9_epitope_Rep4 1041.4913296327702 1041.49022993586 67.386 2 0.1645755201371676 0.0006531678641410843 0.002160758734644442 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 49002 11890 KEFPGFLEN True NCI_RA007_Epitope_Rep1 1079.5287606873098 1079.52766993586 50.232 2 0.1645716531672366 0.0006531678641410843 0.002160951449964831 ['ENSG00000197747|ENST00000368811|S100A10'] 131053 14269 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56516993586 60.07 2 0.16457015671790015 0.0006531678641410843 0.0021610260320143295 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 104901 11488 SRDDNM[Oxidation]FQI True PC9_epitope_Rep4 1140.48697290876 1140.4858699358601 51.95 2 0.16456856946475795 0.0006531678641410843 0.002161105142477652 ['ENSG00000113387|ENST00000265073|SUB1'] 18785 9407 ELDEHELDY True H1975_Epitope_Rep3 1161.4825983405299 1161.48150993586 41.184 2 0.16456558200071736 0.0006531678641410843 0.0021612540488625716 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant'] 115542 6426 TRSITNTTV True PC9_epitope_Rep1 991.52982331647 991.52872993586 29.523 2 0.16456370166387277 0.0006531678641410843 0.002161347777144822 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 54828 17258 KYPENFFLL True NCI_RA007_Epitope_Rep2 1169.61209638845 1169.61098993586 71.866 2 0.16454910270617823 0.0006531678641410843 0.002162075622892824 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 56093 15410 LATRALPEL True PC9_epitope_Rep5 982.5811306133398 982.58002993586 64.283 2 0.16454909007165183 0.0006531678641410843 0.00216207625290597 ['ENSG00000173801|ENST00000393931|JUP'] 108693 8357 SYRDSYESY True PC9_epitope_Rep2 1168.4672826295598 1168.46618993586 37.518 2 0.16454879151306265 0.0006531678641410843 0.0021620911404058264 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 128838 19129 VQDEFLEKL True PC9_epitope_Rep3 1119.5811901829898 1119.58008993586 78.801 2 0.1645486074113004 0.0006531678641410843 0.0021621003206146955 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 85159 6518 QENGHIYVC True H1975_Epitope_Rep2 1061.46002950449 1061.4589299358602 29.985 2 0.16454032919853848 0.0006531678641410843 0.0021625131528145523 ['ENSG00000124275|ENST00000440940|MTRR', 'nc|ENSG00000124275|Q9UBK8-1|MTRR'] 9955 22814 AYNDNWFITF True PC9_epitope_Rep4 1289.57168812845 1289.5705899358602 95.975 2 0.16453575018375793 0.0006531678641410843 0.0021627415408703946 ['ENSG00000107929|ENST00000316157|LARP4B'] 28123 16837 FRADDTFEAL True PC9_epitope_Rep6 1183.55095268387 1183.54984993586 77.278 2 0.1645202758283462 0.0006531678641410843 0.0021635135355341653 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 141143 9655 YSSPYPQEY True H1975_Epitope_Rep1 1132.4713053808398 1132.47020993586 42.068 2 0.1645178072972015 0.0006531678641410843 0.0021636367126869342 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant'] 13418 16454 DMDNQIFGAY True H1975_Epitope_Rep2 1172.4808245187198 1172.4797299358602 68.508 2 0.16451448328783475 0.0006531678641410843 0.0021638025883937415 ['nc|ENSG00000111912|Q8NI08-5|NCOA7', 'nc|ENSG00000111912|Q8NI08-7|NCOA7', 'nc|ENSG00000111912|Q8NI08-2|NCOA7', 'ENSG00000111912|ENST00000392477|NCOA7'] 34575 13407 GPSVFLFPPK True H1975_Epitope_Rep2 1087.6066170851898 1087.6055299358602 56.705 2 0.1645086842010272 0.0006531678641410843 0.0021640920065865757 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 107564 9005 SVPEGPWWRK True NCI_RA007_Epitope_Rep4 1240.63529144452 1240.6336349037902 41.47 3 0.16450822842898474 0.0006531678641410843 0.002164114754690853 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 129926 13464 VRTPYTMSY True PC9_epitope_Rep1 1116.52738078832 1116.5262899358602 56.646 2 0.16450699504739072 0.0006531678641410843 0.002164176315376424 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 16948 6678 EFSGNPIK True PC9_epitope_Rep4 890.4497820906199 890.44868993586 32.867 2 0.16450212238814513 0.0006531678641410843 0.0021644195372293885 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 8383 4788 ATLNVSTTR True NCI_RA007_Epitope_Rep4 961.5192586327701 961.51816993586 24.852 2 0.1644959609824443 0.0006531678641410843 0.0021647271267912975 ['ENST00000460846.1_1_13:111557570-111567134:-|nuORF', 'nc|ENSG00000088448|Q9NXR5-2|ANKRD10', 'ENSG00000088448|ENST00000267339|ANKRD10'] 73333 9572 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4684899358601 41.793 2 0.16449292265394555 0.0006531678641410843 0.00216487882224589 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 114613 7339 TQDPTVTRL True PC9_epitope_Rep6 1029.5454733806098 1029.54436993586 37.402 2 0.16449289252825194 0.0006531678641410843 0.0021648803263928 ['ENSG00000130827|ENST00000369682|PLXNA3'] 134813 20809 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep4 1230.58422733854 1230.5831299358601 88.192 2 0.16449041158351682 0.0006531678641410843 0.0021650042011628844 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 88920 20273 QVFPGLLERV True PC9_epitope_Rep2 1156.6604435631998 1156.65934993586 83.403 2 0.1644902345738598 0.0006531678641410843 0.002165013039611416 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 38012 19769 HAMTEFLEV True PC9_epitope_Rep3 1075.50083168731 1075.4997299358602 81.27 2 0.16448395109274264 0.0006531678641410843 0.0021653268098386588 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 134066 9150 VYKGEEATF True PC9_epitope_Rep5 1042.4971262058598 1042.4960299358602 40.142 2 0.1644792933757749 0.0006531678641410843 0.0021655594256778416 ['ENSG00000075420|ENST00000415807|FNDC3B'] 2086 12485 AELENLVNQAA True H1975_Epitope_Rep3 1170.58806646858 1170.58747496793 53.218 1 0.1644756313378779 0.0006531678641410843 0.0021657423328228973 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 49581 7001 KFTPVASKF True NCI_RA007_Epitope_Rep4 1023.5753169569099 1023.57420993586 33.554 2 0.1644601909166204 0.0006531678641410843 0.0021665137025827868 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX', 'ENST00000446634.1_1_7:143080130-143081191:+|nuORF'] 28182 21597 FRDYFPIQL True PC9_epitope_Rep3 1197.6182443980497 1197.6171499358602 88.368 2 0.16446013897834713 0.0006531678641410843 0.0021665162977689834 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 90136 6234 REDEISPPPP True H1975_Epitope_Rep1 1135.5509526838698 1135.54984993586 29.047 2 0.16445567008455092 0.0006531678641410843 0.002166739605459563 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 77631 5932 NTEVLKNM[Oxidation]GY True H1975_Epitope_Rep2 1183.5543241925898 1183.5532299358601 27.802 2 0.16445518662876027 0.0006531678641410843 0.0021667637648072374 ['ENSG00000101421|ENST00000217402|CHMP4B'] 17747 11012 EHSAVNMNL True PC9_epitope_Rep3 1013.4600295044901 1013.4589299358599 47.348 2 0.16445079696451725 0.0006531678641410843 0.0021669831382924434 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 45682 17504 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6749899358601 72.508 2 0.16444537536724196 0.0006531678641410843 0.00216725411327718 ['ENSG00000136628|ENST00000366923|EPRS1'] 122060 17116 VFYPYPQYF True NCI_RA007_Epitope_Rep3 1222.5698972232997 1222.5688099358601 75.196 2 0.16443886561794857 0.0006531678641410843 0.0021675795195619445 ['ENSG00000103160|ENST00000219439|HSDL1'] 139941 18831 YQAPDIDVQL True PC9_epitope_Rep6 1160.57135377528 1160.5702499358601 85.077 2 0.1644388065556982 0.0006531678641410843 0.002167582472161472 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 90865 9157 REVDPLRIPP True H1975_Epitope_Rep3 1190.6771562565 1190.6760499358602 40.212 2 0.16442702291427475 0.0006531678641410843 0.002168171632304216 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 21024 15523 EQSRIITVL True PC9_epitope_Rep2 1057.6131590176099 1057.61206993586 64.983 2 0.16442419825761184 0.0006531678641410843 0.002168312883662693 ['ENSG00000158006|ENST00000374282|PAFAH2'] 92211 21990 RLIESLFTI True PC9_epitope_Rep1 1090.63864548946 1090.63754993586 89.405 2 0.16442135159036822 0.0006531678641410843 0.002168455245000459 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 76703 16518 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53856993586 68.361 2 0.16441623017507012 0.0006531678641410843 0.0021687113896203046 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 85175 5546 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47634993586 26.378 2 0.16441226013247473 0.0006531678641410843 0.002168909969809803 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 95755 8984 RYIANTVEL True NCI_RA007_Epitope_Rep3 1077.58185888933 1077.5807699358602 42.436 2 0.16440607866912635 0.0006531678641410843 0.0021692192006996795 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 38911 20189 HHFLELVTL True PC9_epitope_Rep2 1107.60767971435 1107.60658993586 83.073 2 0.16439894397422747 0.0006531678641410843 0.0021695761722757855 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 36024 16463 GTYTGFIKV True PC9_epitope_Rep2 984.5280324113198 984.52692993586 68.566 2 0.16439466159897653 0.0006531678641410843 0.0021697904613867266 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 26750 6787 FKDLGEENFK True NCI_RA007_Epitope_Rep3 1225.5979028762897 1225.5968099358602 33.802 2 0.16439051810468067 0.0006531678641410843 0.002169997821063154 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 1674 5720 AEGAPQVEA True H1975_Epitope_Rep2 870.4083112014599 870.40776496793 27.0 1 0.16438927563853176 0.0006531678641410843 0.0021700600036933014 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'CALD1|p.T726Lfs*13|1|0.67|ENSG00000122786|chr7:134960083-134960083|C/-|frameshift_variant', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1', 'ENST00000472096.1_1_7:134625950-134632541:+|nuORF'] 33193 19997 GIYTGFIKV True PC9_epitope_Rep1 996.5644179200399 996.56332993586 81.745 2 0.1643841577659129 0.0006531678641410843 0.0021703161604605847 ['ENSG00000153179|ENST00000542104|RASSF3'] 1595 5682 AEFAERTVA True NCI_RA007_Epitope_Rep5 992.4927095317599 992.49160993586 28.545 2 0.1643644170245042 0.0006531678641410843 0.0021713044956593796 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 21499 13789 ERLQIDEQL True PC9_epitope_Rep4 1142.5931518490197 1142.5920499358601 60.935 2 0.16435654043060233 0.0006531678641410843 0.0021716989688587924 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 77847 10865 NVELDPEIQ True NCI_RA007_Epitope_Rep4 1055.51350454599 1055.51297496793 48.642 1 0.16435631768375608 0.0006531678641410843 0.0021717101254406083 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 132752 21883 VVINFDFPKL True PC9_epitope_Rep1 1190.6699456177398 1190.6688499358602 88.985 2 0.1643561551438969 0.0006531678641410843 0.0021717182665089165 ['ENSG00000110367|ENST00000534980|DDX6'] 100877 5586 SLESINSR True PC9_epitope_Rep1 904.46140940348 904.46030993586 26.315 2 0.16435583396160972 0.0006531678641410843 0.0021717343535261635 ['ENSG00000156482|ENST00000287038|RPL30'] 77224 10156 NRVGDTITV True PC9_epitope_Rep1 973.5192586327701 973.51816993586 43.941 2 0.16435461778310395 0.0006531678641410843 0.0021717952691870514 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 14453 8639 DTENQTLNY True H1975_Epitope_Rep1 1096.46728262956 1096.46618993586 38.159 2 0.16434870027730797 0.0006531678641410843 0.0021720916881878146 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217'] 76414 18423 NQDKNFAFL True PC9_epitope_Rep3 1095.53490869691 1095.53380993586 76.069 2 0.1643418063519337 0.0006531678641410843 0.002172437068880823 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 39110 7901 HHYEGAVVI True PC9_epitope_Rep4 1023.5137793295098 1023.5126899358601 37.819 2 0.164340080230239 0.0006531678641410843 0.0021725235549262633 ['ENSG00000163655|ENST00000496455|GMPS', 'GMPS|p.G20R|1|0.13|ENSG00000163655|chr3:155893548-155893548|G/C|missense_variant'] 34684 14241 GQDGQLKGFAV True PC9_epitope_Rep1 1118.5720224816198 1118.57092993586 59.603 2 0.16433687988409335 0.0006531678641410843 0.002172683914998476 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 112138 20495 TIYKDFVYI True PC9_epitope_Rep5 1160.6117620352798 1160.6106699358602 83.873 2 0.16432497519663172 0.0006531678641410843 0.002173280528258711 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 74809 11100 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.4657899358601 47.684 2 0.1642976165389655 0.0006531678641410843 0.0021746522506831843 ['ENSG00000144597|ENST00000396842|EAF1'] 38214 8245 HEAFESDLAA True H1975_Epitope_Rep3 1088.47745339044 1088.47634993586 36.697 2 0.164295882238798 0.0006531678641410843 0.0021747392350777036 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 97598 5867 SEEVPGTSP True H1975_Epitope_Rep2 901.4028914678499 901.40234496793 27.553 1 0.1642949838982251 0.0006531678641410843 0.0021747842930114206 ['ENSG00000164715|ENST00000297293|LMTK2'] 99732 23239 SIIDEFLHI True PC9_epitope_Rep5 1085.57571087973 1085.57460993586 94.372 2 0.1642901847276841 0.0006531678641410843 0.002175025020098555 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 74808 11005 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.4657899358601 47.319 2 0.16428935667674535 0.0006531678641410843 0.002175066557947233 ['ENSG00000144597|ENST00000396842|EAF1'] 129687 11673 VRPPVQVY True PC9_epitope_Rep1 956.5443511817998 956.54324993586 49.778 2 0.16427796892406726 0.0006531678641410843 0.0021756378867552988 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 52701 20274 KMDASLGNLFA True PC9_epitope_Rep5 1165.58014463717 1165.5790499358602 83.035 2 0.16427283947201968 0.0006531678641410843 0.0021758952827299013 ['ENSG00000196937|ENST00000359943|FAM3C'] 105098 6221 SREESAGPAL True PC9_epitope_Rep1 1015.4934378077497 1015.49234993586 28.743 2 0.16427203219176523 0.0006531678641410843 0.0021759357948362523 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 136860 13396 YADPTKRLEL True PC9_epitope_Rep5 1204.6451874218799 1204.6435349037902 56.545 3 0.16426762627716096 0.0006531678641410843 0.002176156912107137 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5'] 104996 16270 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.60010993586 67.72 2 0.16424656421810474 0.0006531678641410843 0.0021772142527012126 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 2568 14053 AEQTGRWWIV True H1975_Epitope_Rep3 1244.6302060640799 1244.62910993586 59.378 2 0.16424303425925707 0.0006531678641410843 0.002177391511098887 ['ENSG00000146909|ENST00000275820|NOM1', 'ENST00000475176.1_1_7:156754853-156755974:+|nuORF', 'ENST00000472491.1_1_7:156754865-156756721:+|nuORF'] 76483 8661 NQIDHEVTV True PC9_epitope_Rep2 1053.50908787189 1053.50798993586 38.68 2 0.16423741432141267 0.0006531678641410843 0.002177673748452483 ['ENSG00000112159|ENST00000369393|MDN1'] 138301 7257 YHDEADQSAL True PC9_epitope_Rep5 1147.47818166643 1147.47708993586 32.878 2 0.16423322411692115 0.0006531678641410843 0.0021778842073561723 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 11859 19175 DHIEELVSL True PC9_epitope_Rep4 1053.53423999057 1053.5331499358601 81.854 2 0.16423241989264295 0.0006531678641410843 0.0021779246029750253 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 11172 8059 DDNM[Oxidation]FQIGK True NCI_RA007_Epitope_Rep2 1082.47026021546 1082.46916993586 35.98 2 0.16423158142079705 0.0006531678641410843 0.002177966719622494 ['ENSG00000113387|ENST00000265073|SUB1'] 166 13589 AADPVSPLL True NCI_RA007_Epitope_Rep5 881.4858332461699 881.48528496793 58.956 1 0.16423096101053788 0.0006531678641410843 0.0021779978835067388 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 84346 14854 PYVNNVPHL True PC9_epitope_Rep5 1051.54507945779 1051.54398993586 62.137 2 0.16422726763589618 0.0006531678641410843 0.0021781834149694366 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 40602 15608 HRIFEPNCL True PC9_epitope_Rep3 1127.5545985956699 1127.5535099358601 65.185 2 0.1642226761725575 0.0006531678641410843 0.002178414082676142 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF'] 19777 6406 ELSEQIQR True PC9_epitope_Rep1 1001.51417325233 1001.51306993586 29.449 2 0.16422191254323898 0.0006531678641410843 0.00217845244854844 ['ENSG00000092820|ENST00000367075|EZR'] 103415 8248 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 37.083 2 0.16422116313514282 0.0006531678641410843 0.0021784901005820036 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 116930 19568 TVFTDHMLTV True PC9_epitope_Rep2 1162.5692456002998 1162.5681499358602 80.65 2 0.16422059121806792 0.0006531678641410843 0.0021785188354848765 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 106835 17263 SVASELEKI True PC9_epitope_Rep1 974.5284263341399 974.5273299358599 71.221 2 0.16421412176686037 0.0006531678641410843 0.002178843907332553 ['ENSG00000172244|ENST00000306862|C5orf34'] 33241 4519 GKFKQAETL True NCI_RA007_Epitope_Rep4 1020.5603951687598 1020.55928993586 23.777 2 0.16421218730713952 0.0006531678641410843 0.0021789411179443255 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 94858 6076 RSYHLQIVTK True NCI_RA007_Epitope_Rep2 1243.7037053575098 1243.70206490379 28.241 3 0.16420987977520793 0.0006531678641410843 0.002179057081877919 ['ENSG00000131203|ENST00000518237|IDO1'] 87295 11731 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.5123499358601 49.998 2 0.16420403812304377 0.0006531678641410843 0.002179350678939902 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 54758 11136 KYNANFVTF True NCI_RA007_Epitope_Rep3 1102.54474510462 1102.54364993586 50.905 2 0.1642020001591262 0.0006531678641410843 0.0021794531147826084 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 39065 7729 HHSNLIAGM True PC9_epitope_Rep2 978.47053461854 978.46942993586 35.104 2 0.16418478076126744 0.0006531678641410843 0.0021803188195587335 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 21157 11300 ERATNIEVL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 51.242 2 0.16418368147007067 0.0006531678641410843 0.002180374098064787 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 48094 9995 IYNGDMEKI True PC9_epitope_Rep6 1081.51139637101 1081.51028993586 49.004 2 0.16418107338330043 0.0006531678641410843 0.002180505252850227 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 14736 9329 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.5703749679301 40.881 1 0.1641790246762398 0.0006531678641410843 0.0021806082832250147 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 24108 14028 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 59.238 2 0.16417127537807574 0.0006531678641410843 0.0021809980428355137 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 111108 14899 THEDGVLEL True PC9_epitope_Rep5 1011.48728979815 1011.48618993586 62.312 2 0.16416552842998033 0.0006531678641410843 0.002181287136978678 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 37920 10051 GYSFTTTAER True PC9_epitope_Rep5 1131.51965255559 1131.5185499358602 43.64 2 0.16416041877880166 0.0006531678641410843 0.0021815442047401616 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 111225 6275 THITAQTAV True PC9_epitope_Rep1 940.4977949122 940.49668993586 28.949 2 0.16415726979385772 0.0006531678641410843 0.0021817026459997777 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 40478 9408 HRDGEFQEL True PC9_epitope_Rep5 1129.51523588149 1129.5141299358602 41.143 2 0.16414639434438133 0.0006531678641410843 0.002182249932983764 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 8913 8917 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6965849037902 40.961 3 0.16414005735329337 0.0006531678641410843 0.0021825688936714014 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 26041 8016 FGHYQQAEL True NCI_RA007_Epitope_Rep4 1091.50360856863 1091.5025099358602 37.6 2 0.16413911963642694 0.0006531678641410843 0.0021826160958674356 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000535641.5_1_12:121766117-121773388:-|nuORF', 'ENST00000535472.5_1_12:121764442-121775147:-|nuORF', 'ENST00000545218.5_1_12:121756099-121775126:-|nuORF'] 7966 13174 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.46986993586 55.799 2 0.16413357182786306 0.0006531678641410843 0.002182895378807367 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 31229 8773 GDAGAEYVVE True H1975_Epitope_Rep3 1008.4400052525599 1008.4394749679301 38.753 1 0.16413171168192883 0.0006531678641410843 0.0021829890286472666 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6645960-6646242:+|nuORF', 'ENST00000425487.2_1_X:46299833-46299950:-|nuORF', 'ENST00000507324.1_1_15:64821358-64821781:-|nuORF'] 43668 11730 IHDGLTVHL True PC9_epitope_Rep2 1003.54507945779 1003.5439899358599 50.452 2 0.1641298285100424 0.0006531678641410843 0.0021830838418291578 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 77530 8089 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.5822099358602 36.089 2 0.16412191289752429 0.0006531678641410843 0.0021834824189223526 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 77542 11156 NTDLGNDLY True H1975_Epitope_Rep2 1023.4509042894299 1023.4503749679301 47.949 1 0.1641173371790491 0.0006531678641410843 0.0021837128545527285 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 6341 6195 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 28.644 2 0.1641082584074994 0.0006531678641410843 0.0021841701383067823 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 99244 19373 SHNPLANIL True PC9_epitope_Rep1 977.52942939365 977.52832993586 79.327 2 0.16410635768621007 0.0006531678641410843 0.0021842658868293885 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 15520 5842 EANM[Oxidation]PLPGYK True H1975_Epitope_Rep3 1134.5379458524596 1134.5368499358601 27.486 2 0.16410153984730172 0.0006531678641410843 0.002184508603467219 ['nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion'] 21648 13766 ERSDLEYQL True PC9_epitope_Rep2 1151.54586730343 1151.5447699358601 58.237 2 0.1640995678238255 0.0006531678641410843 0.0021846079592937693 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 104691 10213 SQTTVYEKL True PC9_epitope_Rep3 1067.54989005471 1067.5487899358602 44.236 2 0.16409705565932578 0.0006531678641410843 0.002184734535414089 ['ENSG00000118193|ENST00000367350|KIF14'] 65160 19584 LQPERYELW True PC9_epitope_Rep5 1232.61897267404 1232.6178699358602 80.383 2 0.16409470693292028 0.0006531678641410843 0.002184852883290013 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'nc|ENSG00000127663|O94953-2|KDM4B', 'KDM4B-AKAP8L|1|fusion'] 115621 20269 TRVDTILEF True PC9_epitope_Rep5 1092.5815245361598 1092.5804299358601 83.016 2 0.16409349029346895 0.0006531678641410843 0.002184914189967334 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 49435 7928 KEYAVNEVVA True NCI_RA007_Epitope_Rep1 1120.57643915572 1120.57534993586 34.831 2 0.16407739141844305 0.0006531678641410843 0.002185725577049913 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 28919 11827 FTDIDGQVY True H1975_Epitope_Rep3 1056.4763907612798 1056.47528993586 50.637 2 0.16407666241855373 0.0006531678641410843 0.002185762325942228 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 9281 7853 AVQEFGLAR True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 38.01 2 0.16407646880331922 0.0006531678641410843 0.0021857720861920846 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 96360 13281 RYTLQASTF True PC9_epitope_Rep2 1085.5505587610498 1085.54946993586 56.362 2 0.16406770950470093 0.0006531678641410843 0.0021862136927929114 ['ENSG00000055130|ENST00000325222|CUL1'] 138078 20252 YGFPSPIFL True H1975_Epitope_Rep1 1039.5378688190299 1039.53727496793 84.247 1 0.16406684403957947 0.0006531678641410843 0.002186257330705767 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 18199 8171 EILSEVER True NCI_RA007_Epitope_Rep1 973.5080252427299 973.50692993586 35.781 2 0.164061129472645 0.0006531678641410843 0.0021865454886925146 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 32445 10008 GFVTFDDHD True NCI_RA007_Epitope_Rep3 1051.42468954159 1051.42358993586 46.459 2 0.1640610245344397 0.0006531678641410843 0.0021865507805738774 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 118663 10897 TYSTEPNNL True PC9_epitope_Rep1 1037.46655435357 1037.46544993586 46.8 2 0.16405429601160157 0.0006531678641410843 0.0021868901169386948 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 75670 7914 NLGGLAVAR True NCI_RA007_Epitope_Rep2 869.5083000262499 869.50720993586 35.416 2 0.16404850754218342 0.0006531678641410843 0.002187182086158568 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 69654 8982 LVDSKGFDEY True H1975_Epitope_Rep2 1171.5397192938299 1171.5386299358602 39.503 2 0.16404761932447634 0.0006531678641410843 0.0021872268911267354 ['ENSG00000164687|ENST00000297258|FABP5'] 43671 11124 IHDGLTVHL True PC9_epitope_Rep4 1003.54507945779 1003.5439899358599 50.565 2 0.16404666405050017 0.0006531678641410843 0.002187275079683632 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 49896 20819 KIIDEDGLLNL True PC9_epitope_Rep5 1241.68671788069 1241.68562993586 85.129 2 0.1640464637973658 0.0006531678641410843 0.002187285181537469 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 131011 5238 VTDQASHIY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 25.215 2 0.1640462556015532 0.0006531678641410843 0.0021872956841124964 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 75407 14060 NIVEKLREV True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 59.096 2 0.16404533874240093 0.0006531678641410843 0.002187341936276669 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 46197 21852 ISMPDFDLHL True PC9_epitope_Rep3 1186.5692456003 1186.5681499358602 89.357 2 0.16403955936572132 0.0006531678641410843 0.0021876335070263927 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 35614 6998 GTDDGKVGLY True H1975_Epitope_Rep3 1023.48728979815 1023.4861899358599 31.881 2 0.16403784927236775 0.0006531678641410843 0.0021877197890375964 ['ENSG00000082516|ENST00000285873|GEMIN5'] 76815 4436 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 24.216 2 0.16403513466792255 0.0006531678641410843 0.0021878567602009956 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 115046 15300 TRDAGYGGLSL True PC9_epitope_Rep5 1108.5512870370399 1108.55018993586 63.861 2 0.16403401806961776 0.0006531678641410843 0.0021879131030404448 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 4697 15641 ALATLIHQV True PC9_epitope_Rep2 964.5705659296401 964.56946993586 65.438 2 0.16403401753813446 0.0006531678641410843 0.0021879131298590984 ['ENSG00000111652|ENST00000543155|COPS7A'] 130651 10388 VSTEVDARL True PC9_epitope_Rep1 988.5189242795998 988.51782993586 44.84 2 0.16402437439564818 0.0006531678641410843 0.0021883997770420823 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 140894 11317 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep1 1177.4849072200898 1177.48380993586 48.508 2 0.16402219894515296 0.0006531678641410843 0.0021885095774596824 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 28254 15168 FRLKYENEL True PC9_epitope_Rep5 1210.6346227381798 1210.63297490379 63.351 3 0.1640197063724728 0.0006531678641410843 0.002188635390594447 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'nc|ENSG00000171401|P13646-2|KRT13', 'KRT13|p.Y356Lfs*25|1|0.09|ENSG00000171401|chr17:41502553-41502554|-/A|frameshift_variant', 'CON__P13646-1', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000167916|ENST00000264651|KRT24', 'CON__Q2M2I5', 'KRT26|p.E314Gfs*15|1|0.7|ENSG00000186393|chr17:40769784-40769785|-/A|frameshift_variant', 'ENSG00000186393|ENST00000335552|KRT26', 'CON__Q7Z3Y9'] 116356 11722 TTEVVNELY True H1975_Epitope_Rep3 1066.51825557326 1066.51714993586 50.229 2 0.16401191969456924 0.0006531678641410843 0.0021890284713810206 ['ENSG00000113719|ENST00000393784|ERGIC1'] 17474 13196 EHFNGVAEL True PC9_epitope_Rep2 1014.4770594676198 1014.47596993586 56.036 2 0.16400845313687706 0.0006531678641410843 0.0021892034900455955 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B'] 107435 19068 SVLQSIEKI True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 78.374 2 0.16400570441095474 0.0006531678641410843 0.0021893422769477455 ['ENSG00000121931|ENST00000369763|LRIF1'] 136429 20064 WVDPNSPVL True PC9_epitope_Rep2 1025.51819600361 1025.5170899358602 82.582 2 0.1639984870589719 0.0006531678641410843 0.002189706732705078 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 33071 20382 GIMDRFLQV True PC9_epitope_Rep4 1077.5641006502099 1077.56300993586 86.544 2 0.16399557144938068 0.0006531678641410843 0.0021898539798963384 ['ENSG00000157456|ENST00000288207|CCNB2'] 92516 19551 RLYPEGLAQL True PC9_epitope_Rep1 1158.6397081186199 1158.6386099358601 80.028 2 0.16399532832758892 0.0006531678641410843 0.0021898662587365434 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 47774 24020 IYEPNFIFF True PC9_epitope_Rep5 1188.5855472874398 1188.5844499358602 97.377 2 0.16399378317063237 0.0006531678641410843 0.0021899442983325888 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 93375 11760 RQADFVQVL True NCI_RA007_Epitope_Rep2 1074.5821932425 1074.58108993586 50.342 2 0.16398528546827731 0.0006531678641410843 0.002190373532412386 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 113737 13684 TMAKESSIIGV True PC9_epitope_Rep5 1134.59546034814 1134.5943699358602 57.662 2 0.16397675580303556 0.0006531678641410843 0.00219080446555635 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 29533 21785 FVHDLVLYL True PC9_epitope_Rep3 1117.6171817688898 1117.6160899358601 89.095 2 0.16397336842655677 0.0006531678641410843 0.00219097562506378 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 34659 14160 GQDEPLIHV True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 59.289 2 0.16397278390924 0.0006531678641410843 0.0021910051612776048 ['ENSG00000157778|ENST00000288607|PSMG3'] 28108 20642 FQYESKVFYL True PC9_epitope_Rep1 1322.6546894764197 1322.65358993586 84.221 2 0.16397217118187235 0.0006531678641410843 0.0021910361233992673 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 64464 9285 LPPTVYEAVTK True H1975_Epitope_Rep1 1216.67033954056 1216.66924993586 40.626 2 0.16397156454692788 0.0006531678641410843 0.0021910667780915775 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 72943 18209 MQAERIFSEV True PC9_epitope_Rep5 1208.5859582936 1208.58486993586 75.053 2 0.1639626189749523 0.0006531678641410843 0.0021915188686797453 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 111418 17653 THSMDLVAL True PC9_epitope_Rep1 985.4902670036099 985.48916993586 72.695 2 0.16395907937642815 0.0006531678641410843 0.002191697778364247 ['nc|ENSG00000254536|Q6QHF9-5|PAOX', 'nc|ENSG00000254536|Q6QHF9-4|PAOX', 'ENST00000368535.2_1_10:135193041-135204956:+|nuORF', 'ENSG00000148832|ENST00000278060|PAOX'] 107556 11823 SVPEFPLSPPK True NCI_RA007_Epitope_Rep4 1196.6441247927198 1196.64302993586 52.456 2 0.16395825412057616 0.0006531678641410843 0.0021917394931776297 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 59015 9527 LEVNLQAM[Oxidation]K True PC9_epitope_Rep2 1060.5586812970398 1060.55758993586 41.993 2 0.163948601684559 0.0006531678641410843 0.0021922274608713174 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 61396 8586 LITPAVVSER True NCI_RA007_Epitope_Rep5 1083.62880908175 1083.6277099358601 39.706 2 0.16394453515692778 0.0006531678641410843 0.0021924330719609816 ['ENSG00000118181|ENST00000527673|RPS25'] 21234 14484 ERDPSPWAV True PC9_epitope_Rep1 1055.50360856863 1055.5025099358602 60.538 2 0.16394064269745165 0.0006531678641410843 0.002192629899900012 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 107501 11511 SVNGVFKEV True PC9_epitope_Rep4 977.5181960036099 977.51708993586 52.038 2 0.16393841453837804 0.0006531678641410843 0.002192742577989376 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 71487 7390 LYWSHPRKF True NCI_RA007_Epitope_Rep4 1232.6454622053996 1232.6438249037901 35.068 3 0.16393810636412057 0.0006531678641410843 0.0021927581628289053 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 75747 21509 NLLKLIAEV True PC9_epitope_Rep2 1011.6328318330299 1011.63172993586 88.202 2 0.16392771331375763 0.0006531678641410843 0.0021932838199757664 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 50008 11569 KIYEGQVEV True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 49.494 2 0.16392302483691099 0.0006531678641410843 0.0021935209938269383 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 84462 9691 QAIDSIHQV True PC9_epitope_Rep5 1009.51925863277 1009.51816993586 42.244 2 0.16392268955934908 0.0006531678641410843 0.0021935379553428996 ['ENSG00000066084|ENST00000301180|DIP2B', 'nc|ENSG00000151240|Q9Y2E4-2|DIP2C', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A'] 21788 15399 ERYFISHVL True PC9_epitope_Rep2 1162.61349337078 1162.6118549037901 64.513 3 0.16390962975655388 0.0006531678641410843 0.002194198745924103 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 34975 15127 GQSELASRLTL True PC9_epitope_Rep4 1173.6353510141698 1173.63424993586 66.113 2 0.16390828774709748 0.0006531678641410843 0.0021942666592322455 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 27800 19898 FQDDNNLYL True PC9_epitope_Rep2 1140.50875351872 1140.5076499358602 81.933 2 0.1639060558838204 0.0006531678641410843 0.0021943796088550577 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 105698 11094 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 47.707 2 0.16389860359865782 0.0006531678641410843 0.002194756794483399 ['ENSG00000115758|ENST00000234111|ODC1'] 6684 10169 AQAAALYKV True PC9_epitope_Rep5 933.5283667644899 933.52726993586 44.102 2 0.16388364219767387 0.0006531678641410843 0.0021955142377775086 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 39240 18442 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 75.958 2 0.16388218850046357 0.0006531678641410843 0.0021955878472966423 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 135406 16584 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.5550749037902 68.615 3 0.16387759337563051 0.0006531678641410843 0.0021958205425982344 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 72286 9418 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep1 983.4269984211501 983.42590993586 41.139 2 0.16387253506085367 0.0006531678641410843 0.002196076722155661 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 103398 6528 SPPPPPPPP True NCI_RA007_Epitope_Rep2 881.4647038787699 881.46360993586 30.004 2 0.163867105204633 0.0006531678641410843 0.0021963517517612765 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 23100 18257 EVIRELAGI True PC9_epitope_Rep5 998.5760452328998 998.57494993586 75.24 2 0.163858408692845 0.0006531678641410843 0.002196792313638367 ['ENSG00000066654|ENST00000396083|THUMPD1'] 78075 21664 NVVEQFLQA True PC9_epitope_Rep5 1046.53965972418 1046.53856993586 88.377 2 0.16385518428199902 0.0006531678641410843 0.0021969556834712453 ['ENSG00000121060|ENST00000316881|TRIM25'] 23998 6389 EYMKHTRLF True NCI_RA007_Epitope_Rep5 1223.6121134717898 1223.61046490379 31.247 3 0.16384964305860814 0.0006531678641410843 0.0021972364666105306 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 35867 4784 GTMRGIIAK True NCI_RA007_Epitope_Rep4 945.5429712828098 945.54186993586 24.837 2 0.16384594445691567 0.0006531678641410843 0.0021974239009580577 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000582379.1_1_17:7125565-7126253:+|nuORF'] 4116 19707 AHSNEILIF True PC9_epitope_Rep3 1042.54474510462 1042.54364993586 81.031 2 0.1638368432809436 0.0006531678641410843 0.0021978851900594015 ['ENSG00000165516|ENST00000298307|KLHDC2', 'KLHDC2|p.R347T|1|0.07|ENSG00000165516|chr14:49782453-49782453|G/C|missense_variant', 'ENST00000554115.5_1_14:50249154-50249313:+|nuORF'] 2859 5548 AEVETRIEA True H1975_Epitope_Rep1 1016.5138388991599 1016.51274993586 26.406 2 0.16383492379469974 0.0006531678641410843 0.0021979824907331375 ['ENSG00000112685|ENST00000230449|EXOC2'] 3962 6841 AHDQNSNLL True PC9_epitope_Rep1 1010.47812209678 1010.47702993586 31.119 2 0.16383207469127714 0.0006531678641410843 0.0021981269225671905 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'TGM2|p.E314K|1|0.17|ENSG00000198959|chr20:38142119-38142119|C/T|missense_variant'] 111832 20928 TILRLLQQV True PC9_epitope_Rep5 1082.68117900778 1082.68008993586 85.557 2 0.163831948472026 0.0006531678641410843 0.0021981333213180816 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 40612 13772 HRIQDLEQL True PC9_epitope_Rep3 1150.6094706195 1150.60836993586 58.054 2 0.16382954008601755 0.0006531678641410843 0.0021982554192719514 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 129315 10711 VQWKVDNAL True NCI_RA007_Epitope_Rep4 1071.5712942056298 1071.57018993586 48.046 2 0.163829411293906 0.0006531678641410843 0.0021982619488370055 ['nc|ENSG00000211592|P01834|IGKC'] 90438 8124 REIQEAIAVA True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 36.191 2 0.16382868896114886 0.0006531678641410843 0.002198298570373379 ['ENSG00000198218|ENST00000395443|QRICH1'] 8176 9410 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51166993586 41.162 2 0.16382121021269797 0.0006531678641410843 0.002198677771156238 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 54457 14847 KYGIVQEFF True NCI_RA007_Epitope_Rep5 1129.58079626017 1129.5796899358602 63.78 2 0.1638179071987889 0.0006531678641410843 0.002198845267243914 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-3|MTCL2'] 68039 11534 LTDLEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.5382899358601 49.425 2 0.16381767098563382 0.0006531678641410843 0.0021988572461196605 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 35019 7553 GQVALRTSL True NCI_RA007_Epitope_Rep3 943.54507945779 943.5439899358599 36.833 2 0.16381495166018228 0.0006531678641410843 0.0021989951536434383 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 40995 5538 HTEVPARNLY True H1975_Epitope_Rep3 1198.6094706195 1198.60836993586 26.35 2 0.16379749115429987 0.0006531678641410843 0.002199880849481669 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 104092 21246 SQDYPTLAF True PC9_epitope_Rep1 1040.48147614172 1040.4803699358602 86.547 2 0.16378980569277293 0.0006531678641410843 0.0022002708126538993 ['ENSG00000134697|ENST00000373062|GNL2'] 90978 11112 RFDEILEASD True H1975_Epitope_Rep1 1193.5564319871298 1193.55532993586 47.708 2 0.1637715365270597 0.0006531678641410843 0.0022011980742413536 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM'] 37515 17722 GVVDPRAISVL True PC9_epitope_Rep6 1124.65535818276 1124.6542699358602 80.802 2 0.1637654637188529 0.0006531678641410843 0.0022015063894541766 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 9649 19227 AYDTVRWEF True PC9_epitope_Rep4 1185.5454733806098 1185.54436993586 82.057 2 0.163763785910398 0.0006531678641410843 0.0022015915790505832 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 134031 8232 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 41.247 3 0.16375572370028033 0.0006531678641410843 0.0022020009783040593 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 98074 11217 SEQVPLMSA True H1975_Epitope_Rep2 960.4586325221599 960.45752993586 48.187 2 0.16375545524332133 0.0006531678641410843 0.0022020146118647706 ['ENSG00000075188|ENST00000552283|NUP37', 'ENST00000551200.5_1_12:102471044-102512308:-|nuORF'] 6931 14502 AQIKEMVEL True PC9_epitope_Rep4 1059.56343194387 1059.5623299358601 63.695 2 0.1637502594633852 0.0006531678641410843 0.0022022784956643145 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 118695 13340 TYTDVTPRQF True PC9_epitope_Rep5 1226.59315184902 1226.5920499358601 56.327 2 0.16373984353981003 0.0006531678641410843 0.0022028075958398746 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 137802 11111 YEQLSSEALEA True H1975_Epitope_Rep1 1238.56666231766 1238.56607496793 47.704 1 0.16373132151722675 0.0006531678641410843 0.002203240585564173 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 127046 3925 VLSPADKTNVK True NCI_RA007_Epitope_Rep2 1170.66083748602 1170.65920490379 19.903 3 0.1637290371428543 0.0006531678641410843 0.0022033566652638957 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000472694.1_1_16:226715-226811:+|nuORF', 'ENST00000397797.1_1_16:226715-226977:+|nuORF'] 116595 6503 TVADKIHSV True PC9_epitope_Rep1 968.52909504048 968.52798993586 29.817 2 0.163725643002219 0.0006531678641410843 0.002203529148643102 ['ENSG00000276023|ENST00000617516|DUSP14'] 48504 8137 KAINQGGLTSV True PC9_epitope_Rep2 1086.6033226099 1086.6022299358601 36.657 2 0.16371714263799286 0.0006531678641410843 0.0022039611792236003 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 92891 10455 RPFQSLIHA True PC9_epitope_Rep4 1067.58761297611 1067.58650993586 47.924 2 0.16371260526428988 0.0006531678641410843 0.0022041918256655232 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 58166 17498 LEKSFYQF True PC9_epitope_Rep1 1060.5229470308798 1060.52184993586 72.101 2 0.16370271004442014 0.0006531678641410843 0.0022046949089605506 ['ENSG00000039123|ENST00000230640|MTREX'] 140049 13460 YQGVNLYVK True PC9_epitope_Rep3 1082.5760452328998 1082.57494993586 56.822 2 0.1636992748637756 0.0006531678641410843 0.0022048695839591405 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENST00000490798.5_1_20:43550276-43564067:+|nuORF', 'ENST00000476056.5_1_20:43550276-43561823:+|nuORF'] 75727 24696 NLLDLLTEV True PC9_epitope_Rep1 1028.57537652656 1028.5748749679299 99.881 1 0.163698350958375 0.0006531678641410843 0.0022049165658500343 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 115834 9268 TSDTLNNVGY True H1975_Epitope_Rep3 1082.48801807414 1082.48747496793 40.641 1 0.16369011300384984 0.0006531678641410843 0.0022053355216757184 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 109694 5327 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44567496793 25.543 1 0.16368845952672084 0.0006531678641410843 0.002205419621781728 ['ENSG00000179409|ENST00000319004|GEMIN4'] 115630 7957 TRVQEEPEL True PC9_epitope_Rep4 1099.5509526838698 1099.54984993586 38.05 2 0.16368612325813303 0.0006531678641410843 0.002205538455884152 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8'] 7903 9039 ATALEYVYK True NCI_RA007_Epitope_Rep3 1056.54916177872 1056.5480699358602 42.648 2 0.16368494431945343 0.0006531678641410843 0.002205598424928934 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 133637 6247 VYAHIYHQHF True NCI_RA007_Epitope_Rep4 1313.6305404172501 1313.62888490379 30.635 3 0.16368183031320516 0.0006531678641410843 0.002205756832845202 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 118685 13204 TYTDVTPRQF True PC9_epitope_Rep1 1226.59315184902 1226.5920499358601 55.652 2 0.16367732478278188 0.0006531678641410843 0.0022059860470167976 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 64966 13701 LQFDKAINA True PC9_epitope_Rep1 1018.5447451046199 1018.54364993586 57.552 2 0.16367456004501577 0.0006531678641410843 0.002206126711959059 ['ENSG00000140307|ENST00000396060|GTF2A2'] 1480 7285 AEEIPSRIQA True H1975_Epitope_Rep2 1112.58258716532 1112.5814899358602 32.96 2 0.16367210204998964 0.0006531678641410843 0.002206251777903641 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 54004 20979 KVFELDLVTL True PC9_epitope_Rep4 1175.6801759482698 1175.67906993586 88.857 2 0.16366623122146848 0.0006531678641410843 0.002206550521875312 ['ENSG00000117724|ENST00000366955|CENPF'] 137579 2754 YEEPPQKPP True H1975_Epitope_Rep2 1083.5236753068698 1083.52256993586 14.621 2 0.16366095754464885 0.0006531678641410843 0.0022068189135540095 ['ENSG00000064999|ENST00000360359|ANKS1A'] 126658 5617 VLNTNIDGR True NCI_RA007_Epitope_Rep5 1000.53015766964 1000.52906993586 28.294 2 0.16365341554208712 0.0006531678641410843 0.0022072028031611276 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 31653 10267 GEFQSFSSA True NCI_RA007_Epitope_Rep5 958.4032258210199 958.40267496793 46.122 1 0.1636512507286003 0.0006531678641410843 0.0022073130049761764 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 141217 11040 YTAEPVTL True H1975_Epitope_Rep3 892.45419876472 892.4536549679301 47.555 1 0.1636485820704679 0.0006531678641410843 0.002207448863032475 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA', 'ENST00000482611.5_1_10:103552686-103559078:-|nuORF'] 74988 8879 NHQGTYVL True PC9_epitope_Rep1 930.4559301002199 930.45482993586 38.992 2 0.1636437623871653 0.0006531678641410843 0.002207694248272895 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 16459 10278 EELFIVSK True H1975_Epitope_Rep3 963.5276980581499 963.52660993586 44.586 2 0.16364259215058602 0.0006531678641410843 0.002207753832811967 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 24308 15565 EYVEKFYRI True PC9_epitope_Rep1 1245.6393737654498 1245.63772490379 64.694 3 0.16363706000255876 0.0006531678641410843 0.002208035533075799 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 36411 21117 GVFPDNFVKL True PC9_epitope_Rep1 1134.60734536118 1134.6062499358602 86.056 2 0.16363569697064773 0.0006531678641410843 0.0022081049449859352 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 96037 18463 RYLPTGSFPF True PC9_epitope_Rep6 1183.6025943339098 1183.6014899358602 83.658 2 0.16363517075507272 0.0006531678641410843 0.002208131742908412 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 78432 20242 NYLSIFRKF True PC9_epitope_Rep1 1186.6498788795 1186.6487899358601 82.688 2 0.16363464298423716 0.0006531678641410843 0.002208158620360171 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 119746 15372 VAYEEFEKV True PC9_epitope_Rep3 1112.5389910178399 1112.5378899358602 64.284 2 0.1636331491044595 0.0006531678641410843 0.002208234700003945 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 101519 20938 SLLENLEKI True PC9_epitope_Rep3 1057.60192562757 1057.60082993586 85.815 2 0.16363289134354386 0.0006531678641410843 0.0022082478274020223 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 83302 7490 PTDPKVVVY True H1975_Epitope_Rep1 1016.5542471591598 1016.55314993586 33.806 2 0.16362309446259637 0.0006531678641410843 0.0022087468264822717 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 88818 4734 QTYSTEPNNLK True NCI_RA007_Epitope_Rep5 1293.62009487285 1293.61898993586 24.894 2 0.16361790485743494 0.0006531678641410843 0.002209011202002705 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 17123 5308 EGM[Oxidation]NIVEAM[Oxidation]ER True H1975_Epitope_Rep3 1309.5642376337298 1309.5631299358602 25.493 2 0.16361454563002512 0.0006531678641410843 0.0022091823489336364 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 118646 13319 TYSPALNKM[Oxidation]F True PC9_epitope_Rep1 1186.5692459807399 1186.5681499358602 56.092 2 0.1636089017052817 0.0006531678641410843 0.002209469927150324 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 9604 10887 AYAIIKEEL True NCI_RA007_Epitope_Rep5 1048.580461907 1048.57936993586 48.517 2 0.1636048137736995 0.0006531678641410843 0.0022096782452951276 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 36022 17222 GTYTGFIKV True PC9_epitope_Rep1 984.5280324113198 984.52692993586 71.063 2 0.16360289831665747 0.0006531678641410843 0.002209775862404776 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 97450 13556 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.40686993586 57.28 2 0.1635990619675245 0.0006531678641410843 0.0022099713865699295 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 72239 20205 MHFQLPIQA True PC9_epitope_Rep1 1083.55353596651 1083.5524299358601 82.547 2 0.16358691383298637 0.0006531678641410843 0.0022105906449808284 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 138090 15955 YGGLIFNSY True H1975_Epitope_Rep2 1032.4916469026 1032.4905499358601 66.568 2 0.16358094954363103 0.0006531678641410843 0.0022108947416607542 ['ENSG00000198712|ENST00000361739|MT-CO2'] 115209 13583 TRDSLPVSL True PC9_epitope_Rep6 986.53965972418 986.53856993586 63.985 2 0.1635792759497201 0.0006531678641410843 0.0022109800794304696 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 85576 15729 QGFQLTHSL True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 65.325 2 0.16357709283939978 0.0006531678641410843 0.0022110914027600238 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'TUBB2A|p.G140V|1|0.41|ENSG00000137267|chr6:3154782-3154782|C/A|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 76955 9854 NRDTQETLL True PC9_epitope_Rep1 1088.5462016566 1088.5451099358602 42.763 2 0.16356347026444776 0.0006531678641410843 0.002211786185179054 ['nc|ENSG00000197905|Q15561-2|TEAD4', 'nc|ENSG00000187079|P28347-2|TEAD1', 'nc|ENSG00000197905|Q15561-3|TEAD4', 'ENSG00000187079|ENST00000527636|TEAD1', 'ENSG00000197905|ENST00000359864|TEAD4'] 94957 10800 RTLAEIAKV True PC9_epitope_Rep5 999.6076797143498 999.60658993586 46.532 2 0.16356292423078278 0.0006531678641410843 0.0022118140386900263 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 105001 13676 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 60.495 2 0.16354481023456865 0.0006531678641410843 0.0022127382434410487 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 32126 7241 GETLLQRAA True NCI_RA007_Epitope_Rep4 957.5243440132099 957.52324993586 34.487 2 0.16353972807205847 0.0006531678641410843 0.002212997612739084 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1'] 6841 5603 AQFKGTQSL True NCI_RA007_Epitope_Rep3 978.51344497634 978.51234993586 29.034 2 0.16352704876646168 0.0006531678641410843 0.00221364483639963 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 128790 15943 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 73.621 2 0.1635174425558485 0.0006531678641410843 0.0022141353178174957 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 11854 13563 DHHENKYLLL True PC9_epitope_Rep5 1280.65133543148 1280.6502299358601 57.192 2 0.16351457844005796 0.0006531678641410843 0.0022142815771001713 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 68341 15595 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.5746699358601 65.142 2 0.16351404529372235 0.0006531678641410843 0.00221430880388124 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 9127 15227 AVIVWSFMK True NCI_RA007_Epitope_Rep4 1079.58377346563 1079.5826699358602 66.198 2 0.16351155304162932 0.0006531678641410843 0.002214436082947958 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 104703 16404 SQVDRLVAL True PC9_epitope_Rep3 999.5712942056298 999.57018993586 68.236 2 0.1635107348571155 0.0006531678641410843 0.0022144778691439077 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 25518 7495 FEHITAETP True H1975_Epitope_Rep2 1043.49237517859 1043.4912699358601 33.779 2 0.16350727223639117 0.0006531678641410843 0.00221465472031127 ['SPECC1|p.D330Y|1|0.08|ENSG00000128487|chr17:20205037-20205037|G/T|missense_variant', 'nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1'] 103576 6896 SPSPPFGHSA True PC9_epitope_Rep2 982.4508447197801 982.44974993586 31.927 2 0.1634883738971931 0.0006531678641410843 0.002215620189827365 ['ENSG00000141232|ENST00000499247|TOB1'] 29529 16475 FVHDLVLYL True NCI_RA007_Epitope_Rep4 1117.6171817688898 1117.6160899358601 71.418 2 0.1634854467093942 0.0006531678641410843 0.0022157697702462364 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 7866 12991 ATADYICKV True PC9_epitope_Rep1 982.4793679667399 982.47826993586 54.841 2 0.16348318065208967 0.0006531678641410843 0.002215885573573818 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 88941 8858 QVGPEAGMQKV True PC9_epitope_Rep5 1142.5753936099 1142.5742899358602 39.017 2 0.1634830818349833 0.0006531678641410843 0.0022158906236056904 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 48198 21182 IYPTTYVQF True PC9_epitope_Rep1 1130.56481184286 1130.56370993586 86.311 2 0.16348248834789572 0.0006531678641410843 0.002215920953907105 ['ENSG00000179820|ENST00000391770|MYADM'] 41430 18991 HYILHNSFF True PC9_epitope_Rep1 1176.5716285587998 1176.5705299358601 77.835 2 0.1634774784631715 0.0006531678641410843 0.002216177001813762 ['ENSG00000163659|ENST00000295924|TIPARP'] 87751 16443 QRAWTVEQL True PC9_epitope_Rep1 1129.5880068989297 1129.5869099358601 68.073 2 0.1634771448254896 0.0006531678641410843 0.002216194054599505 ['ENSG00000100442|ENST00000396062|FKBP3'] 115702 8959 TSALPIIQK True NCI_RA007_Epitope_Rep2 969.58588164061 969.58478993586 39.468 2 0.16347703044829548 0.0006531678641410843 0.002216199900641368 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 43223 17982 IFKPPDPDNTF True PC9_epitope_Rep1 1289.62920300457 1289.62810993586 73.961 2 0.1634714220271367 0.0006531678641410843 0.0022164865769108534 ['ENSG00000165943|ENST00000298894|MOAP1'] 20187 11507 ENGVYLIDVK True NCI_RA007_Epitope_Rep1 1148.6077392839998 1148.60664993586 48.726 2 0.16347022364520492 0.0006531678641410843 0.0022165478373978725 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 138373 12198 YHGDSDLQL True PC9_epitope_Rep3 1046.4668887067398 1046.4657899358601 51.952 2 0.16346428413243075 0.0006531678641410843 0.00221685148631621 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 120663 6143 VEILANDQGNR True PC9_epitope_Rep6 1227.6207635791898 1227.6196699358602 32.053 2 0.16345972982592807 0.0006531678641410843 0.0022170843467453696 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 35850 9554 GTLSSWNLK True NCI_RA007_Epitope_Rep5 1004.52909504048 1004.52798993586 43.387 2 0.16345237666552326 0.0006531678641410843 0.0022174603633943798 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 142733 9960 YYQHIVTTL True NCI_RA007_Epitope_Rep5 1136.5866099166 1136.58550993586 44.953 2 0.16345189592068382 0.0006531678641410843 0.0022174849493375452 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 71019 20799 LYIQTDHLFF True PC9_epitope_Rep4 1295.6550238295897 1295.65392993586 88.151 2 0.16344672199685115 0.0006531678641410843 0.0022177495680639216 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 128476 6679 VPSLQGEKA True PC9_epitope_Rep1 927.5025459394699 927.50144993586 30.495 2 0.16344626413265873 0.0006531678641410843 0.0022177729869056096 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 28394 16380 FRYPTTEEL True PC9_epitope_Rep1 1154.5607890915799 1154.5596899358602 67.828 2 0.16344423723117027 0.0006531678641410843 0.0022178766618492357 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 141406 16234 YTELEAIMY True H1975_Epitope_Rep2 1131.5158130451098 1131.51470993586 67.653 2 0.16344407923359644 0.0006531678641410843 0.0022178847435454143 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 118217 13172 TYKVISNEF True PC9_epitope_Rep4 1099.5549754351498 1099.5538699358601 58.564 2 0.16344041291377567 0.0006531678641410843 0.0022180722868605797 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 118919 5372 VADPETRTV True PC9_epitope_Rep1 986.50327421546 986.50216993586 25.499 2 0.163434147160804 0.0006531678641410843 0.0022183928357083376 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 53175 6469 KQDGTIQNL True PC9_epitope_Rep2 1015.52982331647 1015.52872993586 30.297 2 0.1634310449220151 0.0006531678641410843 0.0022185515598768715 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 2534 4361 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 21.894 2 0.16342902715978538 0.0006531678641410843 0.002218654803550746 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 120290 10249 VEDLRLINT True H1975_Epitope_Rep3 1071.59242357303 1071.5913299358601 44.471 2 0.16342626587971731 0.0006531678641410843 0.0022187960988907115 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000595844.5_1_19:12787852-12790977:-|nuORF'] 45596 10357 IQVTKVTQV True PC9_epitope_Rep1 1014.6073453611799 1014.60624993586 44.72 2 0.1634262061189417 0.0006531678641410843 0.0022187991569628442 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 92890 13137 RPFQSLIHA True PC9_epitope_Rep3 1067.58761297611 1067.58650993586 55.558 2 0.16341693769077242 0.0006531678641410843 0.0022192734909844422 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 90690 7064 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 32.101 2 0.16341435323857956 0.0006531678641410843 0.0022194057745863445 ['ENSG00000129250|ENST00000320785|KIF1C'] 45678 15247 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6749899358601 63.92 2 0.16341270904670185 0.0006531678641410843 0.0022194899356413455 ['ENSG00000136628|ENST00000366923|EPRS1'] 133808 11065 VYFSKSEQL True PC9_epitope_Rep4 1099.5549754351498 1099.5538699358601 50.338 2 0.16340773318807525 0.0006531678641410843 0.002219744653759782 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant'] 67409 7152 LSSPATLNSR True PC9_epitope_Rep3 1044.5563724174801 1044.55526993586 32.522 2 0.163392966929654 0.0006531678641410843 0.0022205007221450667 ['CON__P00761'] 13827 15056 DQLIYNLLK True H1975_Epitope_Rep1 1118.63356010902 1118.6324699358602 63.163 2 0.16339079423974112 0.0006531678641410843 0.0022206119908766077 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 114122 2644 TPGPGAQSALR True NCI_RA007_Epitope_Rep5 1053.55670677065 1053.55560993586 14.857 2 0.16338917432480157 0.0006531678641410843 0.002220694954284099 ['ENSG00000164587|ENST00000407193|RPS14'] 57387 11669 LEAPILVPHTA True H1975_Epitope_Rep2 1159.66010921003 1159.65900993586 49.957 2 0.16338785985016135 0.0006531678641410843 0.002220762276944308 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52'] 10003 15802 AYQHLFYLL True NCI_RA007_Epitope_Rep3 1166.6124307416198 1166.61132993586 69.795 2 0.16338732125273753 0.0006531678641410843 0.002220789862554999 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 88896 11598 QVEEIFNLK True NCI_RA007_Epitope_Rep4 1118.5971746003 1118.5960699358602 51.559 2 0.1633819514346285 0.0006531678641410843 0.0022210649099127532 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 116929 19932 TVFTDHMLTV True PC9_epitope_Rep1 1162.5692456002998 1162.5681499358602 81.489 2 0.1633774454093446 0.0006531678641410843 0.002221295739222775 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 110389 9647 TEVLKTHGLLV True NCI_RA007_Epitope_Rep4 1208.71287305888 1208.71123490379 43.959 3 0.16337631450594847 0.0006531678641410843 0.002221353675561848 ['ENSG00000142541|ENST00000391857|RPL13A'] 16284 13506 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.3753949679301 57.085 1 0.16337484662130028 0.0006531678641410843 0.002221428877749743 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 84325 8031 PYTKVEESF True NCI_RA007_Epitope_Rep4 1098.5233409536997 1098.5222499358601 37.657 2 0.16336487204384845 0.0006531678641410843 0.0022219399594407283 ['ENSG00000182858|ENST00000330817|ALG12'] 55456 9446 LAFSRPSQL True H1975_Epitope_Rep1 1017.5607295219299 1017.55962993586 41.25 2 0.16335916112337792 0.0006531678641410843 0.0022222326309391575 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 7609 18459 ASFNDTFVHV True PC9_epitope_Rep5 1135.5298233164701 1135.52927496793 76.024 1 0.16335619309527755 0.0006531678641410843 0.002222384750745417 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 96239 9250 RYQDIIHSI True NCI_RA007_Epitope_Rep3 1143.6036569630699 1143.6020249037902 43.489 3 0.16335519675498772 0.0006531678641410843 0.0022224358183266886 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 40420 11112 HQYDGLVEL True NCI_RA007_Epitope_Rep3 1072.5189242795998 1072.5178299358602 50.81 2 0.16335314587380745 0.0006531678641410843 0.002222540940261777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 33729 17655 GLIEILKKV True PC9_epitope_Rep6 1011.6692173417499 1011.66812993586 80.549 2 0.16334790067501165 0.0006531678641410843 0.002222809815814148 ['ENSG00000105185|ENST00000590247|PDCD5'] 113652 16488 TLVYHVVGV True PC9_epitope_Rep5 985.5596668927699 985.55856993586 68.42 2 0.16334412481523566 0.0006531678641410843 0.002223003391304886 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 76541 19937 NQITQLESL True PC9_epitope_Rep2 1044.54513902744 1044.5440499358601 82.084 2 0.1633440153224312 0.0006531678641410843 0.002223009004879976 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 140099 15562 YQLSKEYTL True PC9_epitope_Rep1 1143.58119018299 1143.58008993586 64.683 2 0.16333962541281816 0.0006531678641410843 0.0022232340823650676 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF'] 26716 9396 FIVNTNVPR True NCI_RA007_Epitope_Rep1 1058.58727862294 1058.5861899358601 40.54 2 0.1633315705771008 0.0006531678641410843 0.0022236471255365755 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 8014 15309 ATDLDVANFY True H1975_Epitope_Rep1 1127.51350454599 1127.5124099358602 64.154 2 0.16332933195169605 0.0006531678641410843 0.002223761933418219 ['ENSG00000142252|ENST00000270257|GEMIN7'] 31945 16402 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 68.31 2 0.163329177810052 0.0006531678641410843 0.002223769838788882 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 115446 14725 TRMPDGPVAL True PC9_epitope_Rep5 1055.54336520563 1055.54226993586 61.638 2 0.16332800903033998 0.0006531678641410843 0.002223829782211489 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 73060 10149 MRDPQTEEF True PC9_epitope_Rep3 1151.49172355559 1151.4906299358602 43.991 2 0.16331346387995394 0.0006531678641410843 0.0022245758971489995 ['ENSG00000102241|ENST00000218364|HTATSF1'] 49472 20428 KFAEEFYSF True PC9_epitope_Rep1 1166.5284263341398 1166.52732993586 83.389 2 0.16331237552866937 0.0006531678641410843 0.0022246317357917404 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 130662 8639 VSTEVDARL True PC9_epitope_Rep6 988.5189242795998 988.51782993586 43.049 2 0.16328978990479837 0.0006531678641410843 0.0022257908236016297 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 45554 6414 IQRTPKIQVYS True H1975_Epitope_Rep2 1331.75613485319 1331.7550299358602 29.596 2 0.16328940939304668 0.0006531678641410843 0.002225810356525449 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 134879 16264 VYVQHPITF True PC9_epitope_Rep3 1102.5811306133398 1102.58002993586 67.697 2 0.16328719957560228 0.0006531678641410843 0.002225923797133017 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 88057 17339 QRQQLLVSL True PC9_epitope_Rep3 1083.64004247179 1083.6389499358602 71.867 2 0.16328520884642897 0.0006531678641410843 0.002226025995827933 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 14123 9451 DSDEESLGY True H1975_Epitope_Rep2 1013.38254994609 1013.38144993586 41.32 2 0.1632843899156113 0.0006531678641410843 0.0022260680389002917 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 41316 5007 HVVFIAQR True NCI_RA007_Epitope_Rep5 968.55558457184 968.55448993586 25.964 2 0.16328249866760294 0.0006531678641410843 0.0022261651366752744 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 132028 9169 VTSTFIIEK True NCI_RA007_Epitope_Rep1 1036.5804619069997 1036.57936993586 39.666 2 0.1632810719421001 0.0006531678641410843 0.0022262383883948867 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 104017 13124 SQDGHQWTL True PC9_epitope_Rep5 1070.4781220967802 1070.4770299358602 55.486 2 0.16328065378141116 0.0006531678641410843 0.0022262598582857003 ['ENSG00000185010|ENST00000360256|F8', 'nc|ENSG00000185010|P00451-2|F8'] 112177 10847 TKEVNSGFFY True H1975_Epitope_Rep2 1190.5607890915799 1190.5596899358602 46.752 2 0.1632779769202992 0.0006531678641410843 0.002226397302974276 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 140905 13809 YSEEIVEMY True H1975_Epitope_Rep3 1161.4899922200898 1161.48888993586 58.421 2 0.16326166778402817 0.0006531678641410843 0.002227234886462083 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 118257 17662 TYLEKFQNL True PC9_epitope_Rep2 1154.5971746002997 1154.5960699358602 73.217 2 0.16325980307675864 0.0006531678641410843 0.002227330671739678 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 106121 9474 STDKAEYTFY True H1975_Epitope_Rep2 1223.53463391339 1223.53352993586 41.41 2 0.16325723210532284 0.0006531678641410843 0.0022274627427649215 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 86188 20433 QIFNGTFVKL True PC9_epitope_Rep5 1165.64954452633 1165.64844993586 83.632 2 0.16324867398159443 0.0006531678641410843 0.0022279024307085703 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 9755 18813 AYIDYLSHL True PC9_epitope_Rep6 1093.54441075145 1093.5433099358602 85.007 2 0.16324640307807575 0.0006531678641410843 0.0022280191167415356 ['ENSG00000176102|ENST00000323959|CSTF3'] 54633 10390 KYLEETNSL True PC9_epitope_Rep2 1095.5448046742702 1095.54370993586 45.288 2 0.16324585596016183 0.0006531678641410843 0.002228047230261828 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 28953 8130 FTDRATLY True H1975_Epitope_Rep2 985.48689587533 985.48578993586 36.222 2 0.16324026511224446 0.0006531678641410843 0.002228334534936945 ['ENSG00000082516|ENST00000285873|GEMIN5'] 133965 12138 VYINTAQEF True NCI_RA007_Epitope_Rep5 1083.5236753068698 1083.52256993586 53.343 2 0.16323930074485002 0.0006531678641410843 0.0022283840959687468 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 37849 21392 GYMEGYYTF True PC9_epitope_Rep1 1129.44264810485 1129.4415499358602 87.118 2 0.16323695300631313 0.0006531678641410843 0.002228504756192367 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 68352 8628 LTEMQTEQY True H1975_Epitope_Rep2 1141.49614022969 1141.4950499358602 38.144 2 0.16323234908716777 0.0006531678641410843 0.00222874139004589 ['ENSG00000135537|ENST00000368977|AFG1L', 'ENST00000486863.1_1_6:108843484-108843625:+|nuORF'] 137614 15732 YEFLTPVEEAP True H1975_Epitope_Rep2 1293.61288423409 1293.61178993586 65.686 2 0.1632249550151182 0.0006531678641410843 0.002229121485707875 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'ENSG00000111348|ENST00000228945|ARHGDIB'] 4011 14676 AHESAVTGLSL True PC9_epitope_Rep3 1083.55603806431 1083.5549499358601 61.588 2 0.16321125477104434 0.0006531678641410843 0.002229825924252296 ['ENSG00000110107|ENST00000227524|PRPF19'] 107722 9800 SVSDLFNTK True NCI_RA007_Epitope_Rep4 1009.50802524273 1009.50692993586 44.544 2 0.16320992077418892 0.0006531678641410843 0.0022298945275278843 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 4426 6377 AIQNPTMINK True NCI_RA007_Epitope_Rep4 1128.59612905448 1128.59502993586 31.133 2 0.16320371905327632 0.0006531678641410843 0.002230213490286746 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2', 'SP2|p.P373Qfs*22|1|0.12|ENSG00000167182|chr17:47923015-47923015|C/-|frameshift_variant'] 105177 14225 SRGDFVVEY True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 59.984 2 0.16320330392811958 0.0006531678641410843 0.002230234842353967 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 136906 15085 YAFNMKATV True PC9_epitope_Rep2 1043.5110024481899 1043.5099099358602 63.281 2 0.16320212600827005 0.0006531678641410843 0.002230295430071003 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 141685 9984 YTTDRVMTV True PC9_epitope_Rep4 1084.5222954078802 1084.52118993586 46.063 2 0.1631978978029796 0.0006531678641410843 0.0022305129264191927 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 137850 11617 YESEWTNEV True H1975_Epitope_Rep3 1155.47203365683 1155.47147496793 49.816 1 0.16319573394082085 0.0006531678641410843 0.002230624242392077 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 96144 5380 RYPDNLKHL True PC9_epitope_Rep4 1154.61964138038 1154.61799490379 27.421 3 0.163193451628113 0.0006531678641410843 0.00223074165785487 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 105046 15183 SRDPNYLNL True PC9_epitope_Rep1 1090.54072235334 1090.5396299358601 63.223 2 0.16319171962744358 0.0006531678641410843 0.002230830766182218 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 28448 11668 FSDIHDFEY True H1975_Epitope_Rep1 1171.48220441771 1171.48110993586 49.87 2 0.16318892330708357 0.0006531678641410843 0.0022309746393558527 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.P172Tfs*35|1|0.24|ENSG00000196455|chr3:130744687-130744705|CTTCTGGAAGATAAGTGGG/-|frameshift_variant'] 71928 15059 MEQPLDLTHIV True H1975_Epitope_Rep3 1294.65912323386 1294.6580299358602 63.317 2 0.16318316546750108 0.0006531678641410843 0.002231270914535839 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 109741 5166 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 24.948 2 0.1631798382321233 0.0006531678641410843 0.0022314421385609745 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 25757 10865 FETEFNTQP True H1975_Epitope_Rep2 1111.48220441771 1111.48110993586 46.822 2 0.16317886754573305 0.0006531678641410843 0.002231492093867377 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 84363 20137 PYYSKFILI True PC9_epitope_Rep4 1142.6375828603 1142.63648993586 85.592 2 0.16317645670108005 0.0006531678641410843 0.002231616170168106 ['ENSG00000164815|ENST00000297431|ORC5'] 129094 20083 VQPSLFYHL True PC9_epitope_Rep5 1102.58113061334 1102.58002993586 82.299 2 0.16317088506148653 0.0006531678641410843 0.002231902946018072 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 25519 7487 FEHITAETP True H1975_Epitope_Rep3 1043.49237517859 1043.4912699358601 33.78 2 0.1631677161795046 0.0006531678641410843 0.0022320660668274884 ['SPECC1|p.D330Y|1|0.08|ENSG00000128487|chr17:20205037-20205037|G/T|missense_variant', 'nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1'] 136271 12220 WSDGHLIYY True H1975_Epitope_Rep1 1152.52400966004 1152.52290993586 52.025 2 0.16316596937308045 0.0006531678641410843 0.00223215599022025 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2'] 74866 11384 NHHLFTTTI True PC9_epitope_Rep2 1082.5508931142201 1082.5497899358602 49.11 2 0.16316306825597807 0.0006531678641410843 0.0022323053440709583 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 94900 9559 RTEEALQLY True H1975_Epitope_Rep3 1121.5716881284498 1121.5705899358602 41.778 2 0.16316235440187962 0.0006531678641410843 0.0022323420958793644 ['ENSG00000174780|ENST00000642900|SRP72'] 31643 8262 GEFQEVVRA True NCI_RA007_Epitope_Rep4 1033.5192586327696 1033.5181699358602 38.588 2 0.16315997598993787 0.0006531678641410843 0.0022324645495502807 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2', 'ENSG00000178685|ENST00000313028|PARP10', 'ENST00000526007.5_1_8:145051654-145057989:-|nuORF'] 140366 11730 YRDPYTGQSV True PC9_epitope_Rep1 1184.5462016566 1184.5451099358602 49.994 2 0.1631599729096314 0.0006531678641410843 0.0022324647081456775 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 75667 9107 NLGGGVVTIER True NCI_RA007_Epitope_Rep2 1113.61422164677 1113.6131299358601 40.03 2 0.1631579004807624 0.0006531678641410843 0.0022325714136127673 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 27986 18086 FQIVNPHLL True PC9_epitope_Rep6 1079.61276509479 1079.6116699358602 82.205 2 0.16315464059498477 0.0006531678641410843 0.0022327392693181 ['ENSG00000167325|ENST00000300738|RRM1'] 52698 20340 KMDASLGNLFA True PC9_epitope_Rep1 1165.58014463717 1165.5790499358602 83.068 2 0.163153185866515 0.0006531678641410843 0.0022328141792249683 ['ENSG00000196937|ENST00000359943|FAM3C'] 95676 19119 RYFDVGLHNF True PC9_epitope_Rep5 1266.6145559999397 1266.6129149037902 78.574 3 0.16314791173110774 0.0006531678641410843 0.0022330857870451752 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 140828 4266 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 21.527 2 0.1631473761096602 0.0006531678641410843 0.0022331133723653297 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 134915 14966 VYVVGTAHF True PC9_epitope_Rep2 991.5127167003499 991.51160993586 62.824 2 0.16314627409010954 0.0006531678641410843 0.0022331701291213335 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 100998 12099 SLFTDVVAEK True H1975_Epitope_Rep3 1107.58119018299 1107.58008993586 51.703 2 0.1631429622966165 0.0006531678641410843 0.002233340703423663 ['CON__ENSEMBL:ENSBTAP00000024146'] 58983 9787 LEVEIEPGVR True H1975_Epitope_Rep1 1139.6186383208699 1139.61754993586 42.576 2 0.1631371270434701 0.0006531678641410843 0.002233641280485027 ['ENSG00000090520|ENST00000265028|DNAJB11'] 45442 18445 IQIMKVEEI True PC9_epitope_Rep5 1101.61038213629 1101.60928993586 75.97 2 0.16312755930274173 0.0006531678641410843 0.002234134207496349 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 141954 17951 YVIDPIKGLKL True PC9_epitope_Rep6 1257.7696596590097 1257.7680149037901 81.676 3 0.16312643354956347 0.0006531678641410843 0.0022341922130954426 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 110239 9675 TEQYPQGLGP True H1975_Epitope_Rep3 1088.5138388991597 1088.51274993586 42.234 2 0.16312512337747176 0.0006531678641410843 0.0022342597229651593 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'ENST00000591718.1_1_19:55966993-55972941:-|nuORF'] 42045 15290 IDIIPNPQER True PC9_epitope_Rep3 1193.64043639461 1193.6393299358601 63.964 2 0.16312154200969017 0.0006531678641410843 0.002234444272233726 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 77852 16643 NVELDPEIQ True PC9_epitope_Rep3 1055.51350454599 1055.5124099358602 69.154 2 0.16312118440059362 0.0006531678641410843 0.0022344627008054085 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 78448 12728 NYLVLPNRI True NCI_RA007_Epitope_Rep5 1100.63422881536 1100.63312993586 55.623 2 0.16311963223632467 0.0006531678641410843 0.002234542689822119 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 61377 7330 LITEDVQGK True PC9_epitope_Rep3 1001.5393253710098 1001.53822993586 33.204 2 0.1631009683709097 0.0006531678641410843 0.002235504734954548 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 121787 10717 VFPDKGYSF True NCI_RA007_Epitope_Rep3 1058.5072969667401 1058.5061899358602 49.202 2 0.16309620102512315 0.0006531678641410843 0.002235750538286688 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 35865 5225 GTMKAQGVLLK True NCI_RA007_Epitope_Rep5 1144.6638146914797 1144.66216490379 26.795 3 0.16309563524019796 0.0006531678641410843 0.0022357797118295994 ['nc|ENSG00000166482|P55083-2|MFAP4'] 1540 10611 AEEPVFAAA True H1975_Epitope_Rep2 903.4337976733099 903.43324496793 45.838 1 0.16309217729458883 0.0006531678641410843 0.002235958021992694 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 37762 18496 GYADIVQLL True NCI_RA007_Epitope_Rep3 990.5385970950199 990.53750993586 80.938 2 0.16307329583119431 0.0006531678641410843 0.0022369319018700185 ['ENSG00000134996|ENST00000346234|OSTF1'] 121256 9947 VETFSGVYK True PC9_epitope_Rep4 1028.5178616504397 1028.51676993586 45.916 2 0.16307055551428995 0.0006531678641410843 0.002237073278861298 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 5284 11669 ALQEMVHQV True PC9_epitope_Rep2 1053.52771514149 1053.52660993586 50.215 2 0.16306922238023383 0.0006531678641410843 0.0022371420604422446 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 78404 20443 NYLLYVSNF True PC9_epitope_Rep6 1131.5600608155898 1131.5589699358602 91.351 2 0.163061430663291 0.0006531678641410843 0.0022375441077554445 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 27959 9356 FQESSVKEL True PC9_epitope_Rep4 1065.5342399905699 1065.5331499358601 43.598 2 0.1630551086319341 0.0006531678641410843 0.0022378703733471283 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 40745 6544 HRTELETKL True PC9_epitope_Rep5 1125.61422164677 1125.61258490379 30.145 3 0.16305330208023192 0.0006531678641410843 0.0022379636140855 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 73663 17338 MYINEVERL True PC9_epitope_Rep2 1165.58014463717 1165.5790499358602 71.945 2 0.16305265212171688 0.0006531678641410843 0.0022379971610508548 ['PTPN14|p.Y570Ifs*131|1|0.11|ENSG00000152104|chr1:214384147-214384148|-/T|frameshift_variant', 'ENSG00000152104|ENST00000366956|PTPN14'] 53058 12473 KPNPNQIISV True PC9_epitope_Rep5 1108.62405805448 1108.62296993586 52.976 2 0.1630522328200758 0.0006531678641410843 0.002238018803156657 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 53148 15190 KPYNVYITV True PC9_epitope_Rep4 1095.59644632431 1095.5953499358602 66.352 2 0.16304410509985898 0.0006531678641410843 0.002238438353879382 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 115247 12723 TREEGTPLTL True PC9_epitope_Rep1 1115.5822528121498 1115.5811499358601 53.813 2 0.16304239086719974 0.0006531678641410843 0.0022385268521423873 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 82653 19056 PQPDVFPLF True NCI_RA007_Epitope_Rep4 1058.54368247546 1058.5425899358602 82.427 2 0.1630396398353715 0.0006531678641410843 0.0022386688830764714 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 25996 18449 FGFEITHEV True PC9_epitope_Rep4 1077.51311062317 1077.51200993586 79.034 2 0.16303373495452414 0.0006531678641410843 0.0022389737720973292 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 17315 8235 EHALGTPEV True PC9_epitope_Rep4 951.4661604307499 951.46506993586 39.138 2 0.16303118184080329 0.0006531678641410843 0.0022391056108648244 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 128069 12124 VPLAIVNKA True PC9_epitope_Rep3 923.58040233735 923.57930993586 51.677 2 0.16302623007191297 0.0006531678641410843 0.0022393613345180596 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 15302 8129 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep2 1252.5506357944798 1252.5495299358602 36.626 2 0.16302617149259932 0.0006531678641410843 0.002239364359897741 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 115167 19000 TRDPLVLEL True PC9_epitope_Rep4 1054.60225998074 1054.60116993586 81.174 2 0.16302161864521933 0.0006531678641410843 0.0022395995081619393 ['FKBP11|p.I85L|1|0.28|ENSG00000134285|chr12:48924591-48924591|T/A|missense_variant'] 137225 12620 YAYRDAVFL True H1975_Epitope_Rep2 1116.56039516876 1116.55928993586 53.641 2 0.16301699869964706 0.0006531678641410843 0.0022398381471777726 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000525495.6_2_17:45219385-45266538:-|nuORF', 'ENST00000528147.1_1_17:45258889-45266538:-|nuORF'] 111136 11058 THFHELTAL True PC9_epitope_Rep4 1067.53999407735 1067.5388899358602 50.312 2 0.1630106317396672 0.0006531678641410843 0.0022401670682475703 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 48290 12309 IYQRDPLKL True PC9_epitope_Rep5 1144.6604435631998 1144.65880490379 52.337 3 0.16300902203627746 0.0006531678641410843 0.002240250234158973 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 9188 7724 AVLSSPLSH True NCI_RA007_Epitope_Rep3 909.49198125577 909.49088993586 37.505 2 0.16300901472089593 0.0006531678641410843 0.002240250612117865 ['ENSG00000110799|ENST00000261405|VWF', 'VWF|p.N911Ifs*9|1|0.28|ENSG00000110799|chr12:6031534-6031534|C/-|frameshift_variant'] 52578 20701 KLILLITQV True PC9_epitope_Rep2 1039.7005174700298 1039.69942993586 85.063 2 0.16300594939911872 0.0006531678641410843 0.002240408991641561 ['ENSG00000163811|ENST00000407426|WDR43'] 109887 6438 TEFEDIKSG True NCI_RA007_Epitope_Rep4 1024.4713053808398 1024.47020993586 31.364 2 0.16300465037755443 0.0006531678641410843 0.0022404761130658843 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 28445 5975 FSDGTHGGLRY True H1975_Epitope_Rep2 1208.55743504664 1208.55577490379 27.961 3 0.1630036497706626 0.0006531678641410843 0.0022405278165490055 ['ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 95219 18857 RVLDELTLA True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 77.551 2 0.16300312343550338 0.0006531678641410843 0.0022405550138830162 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 76709 16345 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53911496793 68.116 1 0.16300179680417423 0.0006531678641410843 0.0022406235664110897 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 134461 13038 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 55.154 2 0.16300132512570256 0.0006531678641410843 0.002240647940493787 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 129217 7986 VQTEVNREL True PC9_epitope_Rep5 1086.56693710118 1086.5658499358601 35.657 2 0.16299904875582769 0.0006531678641410843 0.0022407655761034983 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 87209 14589 QPITPGPSI True PC9_epitope_Rep2 908.4967322830399 908.49562993586 61.386 2 0.16299223066266083 0.0006531678641410843 0.002241117950563095 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 23081 17102 EVIKELAQI True PC9_epitope_Rep2 1041.6070110080097 1041.6059099358602 71.032 2 0.16299000072496733 0.0006531678641410843 0.00224123321079793 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 14177 14197 DSDSDQLFY True H1975_Epitope_Rep2 1088.42983449168 1088.42872993586 59.76 2 0.16298858533742483 0.0006531678641410843 0.0022413063719242915 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 117934 16078 TWTEVSYTF True NCI_RA007_Epitope_Rep5 1132.5076908895599 1132.5065899358601 68.574 2 0.16298628921569014 0.0006531678641410843 0.0022414250631180594 ['ENSG00000116663|ENST00000376753|FBXO6'] 98196 8865 SETEYVIRC True H1975_Epitope_Rep2 1098.5015599633 1098.50046993586 39.068 2 0.16298484897523755 0.0006531678641410843 0.0022414995152762926 ['ENSG00000181789|ENST00000314797|COPG1'] 5384 14584 ALSKEGIVAL True PC9_epitope_Rep2 999.5964463243098 999.59534993586 61.366 2 0.16298168214947878 0.0006531678641410843 0.00224166323066794 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 114649 18261 TQEDVRLIGL True PC9_epitope_Rep2 1142.62953735774 1142.62844993586 75.561 2 0.16298083658954812 0.0006531678641410843 0.0022417069456008997 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 109330 13510 TAYWKELSL True H1975_Epitope_Rep3 1109.57571087973 1109.57460993586 57.244 2 0.1629728735559217 0.0006531678641410843 0.0022421186713747787 ['ENST00000579880.5_1_17:8339285-8348278:+|nuORF', 'ENST00000580738.5_1_17:8339285-8349209:+|nuORF', 'nc|ENSG00000166579|Q9GZM8-3|NDEL1', 'ENSG00000166579|ENST00000334527|NDEL1', 'nc|ENSG00000166579|Q9GZM8-2|NDEL1'] 107575 14984 SVPIDLQKV True PC9_epitope_Rep1 997.58079626017 997.57968993586 62.457 2 0.16296808488648193 0.0006531678641410843 0.0022423663041805045 ['ENSG00000198056|ENST00000338193|PRIM1'] 53958 15782 KTYEAALETI True PC9_epitope_Rep5 1137.5917548666898 1137.59064993586 65.699 2 0.16296320738202494 0.0006531678641410843 0.002242618558939307 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 104243 12822 SQIALNEKL True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 54.341 2 0.16296159881975752 0.0006531678641410843 0.002242701756775047 ['ENSG00000175390|ENST00000651655|EIF3F'] 140029 7470 YQEGAKMAV True PC9_epitope_Rep5 995.4746169394698 995.47350993586 33.686 2 0.1629603474737067 0.0006531678641410843 0.002242766480855842 ['ENSG00000173801|ENST00000393931|JUP'] 77192 5275 NRSEVQANL True PC9_epitope_Rep2 1029.52032126193 1029.51922993586 25.679 2 0.16295599103856753 0.0006531678641410843 0.0022429918257800526 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 89052 20226 QVLPHLLEV True PC9_epitope_Rep5 1046.6124307416198 1046.61132993586 82.846 2 0.16295126913531752 0.0006531678641410843 0.002243236100792378 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 71033 21153 LYIVEPLKF True PC9_epitope_Rep5 1120.6532329244399 1120.65212993586 86.418 2 0.1629373785647171 0.0006531678641410843 0.002243954846380083 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 8273 5622 ATIEEAYSR True NCI_RA007_Epitope_Rep4 1038.4981888350198 1038.49708993586 28.225 2 0.1629361815063655 0.0006531678641410843 0.0022440167970388617 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 61936 10555 LLDIRSEY True H1975_Epitope_Rep3 1007.5287606873101 1007.52766993586 45.666 2 0.16293535303534526 0.0006531678641410843 0.002244059673414394 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 77369 12254 NSELSCQLY True H1975_Epitope_Rep1 1055.4593607981499 1055.45826993586 52.158 2 0.16293163488780546 0.0006531678641410843 0.0022442521110962754 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 50055 6108 KKFGGVQEL True NCI_RA007_Epitope_Rep4 1004.5654805491998 1004.56438993586 30.108 2 0.16292789032736524 0.0006531678641410843 0.002244445932479572 ['ENSG00000124596|ENST00000424266|OARD1', 'ENST00000465893.1_1_6:41037763-41039373:-|nuORF'] 109384 10159 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep3 950.47091177432 950.46980993586 44.119 2 0.16292238813513027 0.0006531678641410843 0.0022447307606091775 ['ENSG00000005022|ENST00000317881|SLC25A5'] 46574 5736 ITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep2 1047.56343232431 1047.5623299358601 26.927 2 0.16292066123875787 0.0006531678641410843 0.002244820163090445 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 43435 8603 IGGIGTVPVGR True NCI_RA007_Epitope_Rep4 1024.6029286870798 1024.60182993586 39.874 2 0.1629189840053988 0.0006531678641410843 0.002244906997893229 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 138617 9868 YIDSKFEDY True H1975_Epitope_Rep2 1178.5131701928199 1178.5120699358602 42.944 2 0.16291871848073516 0.0006531678641410843 0.002244920745114414 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 9929 16412 AYLSKAMEI True PC9_epitope_Rep3 1024.52631815916 1024.5252299358601 68.266 2 0.16291599415351327 0.0006531678641410843 0.0022450617987502786 ['ENSG00000124784|ENST00000379834|RIOK1'] 40154 19753 HQDNNFLYL True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 80.807 2 0.16291405166136905 0.0006531678641410843 0.002245162377826114 ['XPNPEP3|p.D217*|1|0.36|ENSG00000196236|chr22:40886370-40886371|-/T|frameshift_variant', 'nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 8058 11524 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.48637496793 49.312 1 0.16291401413713005 0.0006531678641410843 0.002245164320814349 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 21202 8986 ERDMSNVSL True PC9_epitope_Rep6 1049.48115887189 1049.48006993586 44.586 2 0.16290938137510522 0.0006531678641410843 0.002245404216060745 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 38498 5243 HEQSRIITV True H1975_Epitope_Rep2 1081.58800689893 1081.5869099358601 25.234 2 0.16290716373084718 0.0006531678641410843 0.0022455190599290345 ['ENSG00000158006|ENST00000374282|PAFAH2'] 104327 8759 SQIQEFKEA True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 38.645 2 0.16290275478180172 0.0006531678641410843 0.0022457474010736437 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 128070 12218 VPLAIVNKA True PC9_epitope_Rep3 923.58040233735 923.57930993586 52.027 2 0.1629026126504297 0.0006531678641410843 0.002245754762497382 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 93118 10783 RPNSLVGITSA True PC9_epitope_Rep4 1113.61422164677 1113.6131299358601 49.235 2 0.16289898943576925 0.0006531678641410843 0.002245942428142997 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 24237 5511 EYSKQMQRF True PC9_epitope_Rep4 1215.57064258263 1215.56899490379 27.958 3 0.16288967093649914 0.0006531678641410843 0.0022464251549904114 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 38907 18335 HHFEWIQKL True PC9_epitope_Rep5 1236.64037682496 1236.63874490379 75.54 3 0.1628830213852453 0.0006531678641410843 0.0022467696855302736 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 140316 15213 YRDGLVEQL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 63.525 2 0.16288244504561522 0.0006531678641410843 0.0022467995496714887 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF'] 103925 11771 SQANIAQVL True NCI_RA007_Epitope_Rep4 942.5134449763399 942.51289496793 52.251 1 0.16288060996337805 0.0006531678641410843 0.0022468946406127162 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 111077 13341 THDLVGPEL True PC9_epitope_Rep2 979.49746055903 979.49636993586 56.589 2 0.16287839568746232 0.0006531678641410843 0.0022470093861001964 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 31410 8966 GDYPLEAVR True NCI_RA007_Epitope_Rep2 1018.5083595959 1018.50726993586 39.494 2 0.16286930065496866 0.0006531678641410843 0.002247480759129935 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 104895 12866 SRDDNM[Oxidation]FQI True PC9_epitope_Rep1 1140.48697290876 1140.4858699358601 54.364 2 0.16286790896889314 0.0006531678641410843 0.0022475528954917765 ['ENSG00000113387|ENST00000265073|SUB1'] 15166 7961 EAALSTALSEK True NCI_RA007_Epitope_Rep2 1118.58191845898 1118.58082993586 35.598 2 0.1628595739883003 0.0006531678641410843 0.0022479849775390347 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 115429 6536 TRLQQAQAL True PC9_epitope_Rep4 1027.5774422152297 1027.5763499358602 32.268 2 0.1628557085784497 0.0006531678641410843 0.002248185387005595 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 75126 10764 NHYGGVVSL True PC9_epitope_Rep6 944.4715801643599 944.47048993586 52.231 2 0.16285569069143813 0.0006531678641410843 0.0022481863144329537 ['nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 14773 9089 DVNQQEFVR True PC9_epitope_Rep2 1133.5465360097699 1133.54542993586 40.302 2 0.1628520430684921 0.0006531678641410843 0.0022483754487773967 ['ENSG00000105372|ENST00000598742|RPS19'] 84488 14027 QALLDLHAL True NCI_RA007_Epitope_Rep4 992.5654805492001 992.56438993586 61.238 2 0.1628263347772628 0.0006531678641410843 0.0022497089105870532 ['ENSG00000087086|ENST00000331825|FTL'] 18468 19281 EKDPSYFVF True PC9_epitope_Rep4 1130.5284263341398 1130.52732993586 82.269 2 0.1628241415586739 0.0006531678641410843 0.00224982270708829 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 4414 18330 AIQDKLFQV True PC9_epitope_Rep2 1060.59169529704 1060.5905899358602 75.835 2 0.1628171336041514 0.0006531678641410843 0.0022501863576910087 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 115637 10080 TRVSQINTL True PC9_epitope_Rep3 1030.5771078620598 1030.5760099358602 43.727 2 0.16281689464002425 0.0006531678641410843 0.002250198758842481 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 115012 10239 TRAQIEDTL True PC9_epitope_Rep1 1045.54038800017 1045.53928993586 44.265 2 0.16281657445251993 0.0006531678641410843 0.0022502153752249096 ['ENSG00000007080|ENST00000445755|CCDC124'] 108803 5180 SYTSGPGSRI True NCI_RA007_Epitope_Rep3 1023.49852318819 1023.4974299358599 27.367 2 0.16281018630230507 0.0006531678641410843 0.0022505469189329527 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 5013 19049 ALIDRMVNL True PC9_epitope_Rep4 1043.57975071435 1043.57864993586 81.361 2 0.16280481285223308 0.0006531678641410843 0.002250825837706125 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 126822 18301 VLPSVLNKF True PC9_epitope_Rep4 1015.60661708519 1015.60552993586 78.463 2 0.16280464697500313 0.0006531678641410843 0.002250834448417309 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 8181 9532 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51166993586 41.672 2 0.16280312726023263 0.0006531678641410843 0.0022509133385647667 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 108577 4850 SYNRGDSTF True NCI_RA007_Epitope_Rep3 1045.44648761533 1045.44538993586 26.064 2 0.16279838888379147 0.0006531678641410843 0.002251159330891797 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 128808 12491 VQANSGAIVKL True PC9_epitope_Rep1 1098.6397081186199 1098.6386099358601 52.914 2 0.162795954690122 0.0006531678641410843 0.002251285712251107 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 64454 7025 LPPNVVEESAR True H1975_Epitope_Rep1 1209.63535101417 1209.63424993586 32.057 2 0.1627955677438797 0.0006531678641410843 0.002251305802838969 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENST00000462568.1_1_12:9232657-9243123:-|nuORF', 'ENSG00000175899|ENST00000318602|A2M'] 92360 14763 RLPEIYIQL True NCI_RA007_Epitope_Rep3 1143.66519459047 1143.6640899358601 65.486 2 0.1627942897329139 0.0006531678641410843 0.002251372159560862 ['EHD4|p.F425Sfs*51|1|0.18|ENSG00000103966|chr15:41900999-41900999|G/-|frameshift_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 104717 13562 SQVDVAVKI True PC9_epitope_Rep3 957.5494961318899 957.54838993586 57.22 2 0.16279111830735546 0.0006531678641410843 0.002251536834355626 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 72058 19857 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55707496793 82.364 1 0.1627880586271113 0.0006531678641410843 0.0022516957182342682 ['ENSG00000198712|ENST00000361739|MT-CO2'] 131176 12185 VTEKDLLLY True H1975_Epitope_Rep3 1092.60667665484 1092.60556993586 52.041 2 0.16278316518722433 0.0006531678641410843 0.002251949849352689 ['ENSG00000168807|ENST00000336278|SNTB2'] 116994 3943 TVGVEPAADGK True NCI_RA007_Epitope_Rep5 1042.5294889632999 1042.52838993586 21.497 2 0.1627777993607896 0.0006531678641410843 0.0022522285458756426 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 78390 21136 NYLDRFLSL True PC9_epitope_Rep4 1139.59750895347 1139.59640993586 89.461 2 0.16276820392577812 0.0006531678641410843 0.002252727010644346 ['ENSG00000110092|ENST00000227507|CCND1'] 47391 17976 IVISKLTQI True PC9_epitope_Rep5 1013.6484818971699 1013.64738993586 74.163 2 0.16276727803439978 0.0006531678641410843 0.0022527751147882044 ['ENSG00000113141|ENST00000417647|IK'] 129077 15916 VQPRNWLLF True NCI_RA007_Epitope_Rep4 1171.6502132326698 1171.64910993586 69.09 2 0.16276395570481944 0.0006531678641410843 0.002252947732923772 ['ENSG00000060762|ENST00000360961|MPC1'] 131014 5353 VTDQASHIY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 25.66 2 0.16276058409373498 0.0006531678641410843 0.002253122925088647 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 90818 9114 RETETVFVP True H1975_Epitope_Rep1 1076.5502244078798 1076.54912993586 39.961 2 0.16275324741160854 0.0006531678641410843 0.002253504193211346 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 140662 14779 YRTDMIQAL True PC9_epitope_Rep6 1109.55392988933 1109.55282993586 68.808 2 0.16275316159052336 0.0006531678641410843 0.0022535086534894483 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 107540 17282 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 71.483 2 0.16275251966512083 0.0006531678641410843 0.002253542015801484 ['ENSG00000073756|ENST00000367468|PTGS2'] 84647 16551 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 69.038 2 0.16274287237980417 0.0006531678641410843 0.0022540434664423577 ['CON__P12763'] 41059 6223 HTLNQIDSVK True PC9_epitope_Rep1 1153.6091362663299 1153.60802993586 28.751 2 0.16273791809651333 0.0006531678641410843 0.002254301025585877 ['CON__P12763'] 115430 8231 TRLQQAQAL True PC9_epitope_Rep5 1027.5774422152297 1027.5763499358602 36.6 2 0.162734117222729 0.0006531678641410843 0.0022544986421737124 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 29376 20493 FVDPAQITM True PC9_epitope_Rep2 1020.49501803088 1020.49392993586 84.257 2 0.16273166019076754 0.0006531678641410843 0.00225462639839836 ['ENSG00000167325|ENST00000300738|RRM1'] 108261 16067 SYIEHIFEI True NCI_RA007_Epitope_Rep5 1149.57062549929 1149.57007496793 68.532 1 0.1627204710818958 0.0006531678641410843 0.0022552082805708607 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 92888 11019 RPFQSLIHA True PC9_epitope_Rep2 1067.58761297611 1067.58650993586 47.704 2 0.16271708533649887 0.0006531678641410843 0.002255384383582165 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 42389 9836 IEDFEARIA True H1975_Epitope_Rep1 1062.53457434374 1062.53346993586 42.765 2 0.16271590228690164 0.0006531678641410843 0.0022554459208627754 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 32177 8731 GEVREDLRLP True H1975_Epitope_Rep2 1182.6356853673399 1182.63403490379 38.545 3 0.1627156156104457 0.0006531678641410843 0.0022554608328227707 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A'] 127093 9134 VLTEIIASR True H1975_Epitope_Rep1 1000.5916952970399 1000.59058993586 40.04 2 0.16271512973275148 0.0006531678641410843 0.0022554861067965713 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 117229 22611 TVLQELINV True PC9_epitope_Rep3 1027.5913609438699 1027.59026993586 92.241 2 0.16271407774026314 0.0006531678641410843 0.002255540829419258 ['ENSG00000138160|ENST00000260731|KIF11'] 36646 19070 GVIEKLLTS True PC9_epitope_Rep2 958.5698972233 958.56880993586 78.717 2 0.16271205033069724 0.0006531678641410843 0.0022556462951013765 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 2737 8293 AETEFFSKA True H1975_Epitope_Rep2 1028.48147614172 1028.4803699358602 36.85 2 0.16271191718992958 0.0006531678641410843 0.002255653221245794 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 8056 11356 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.48637496793 48.658 1 0.1627061086922035 0.0006531678641410843 0.002255955407039121 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 32235 7023 GEYISKDGVP True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 31.939 2 0.1627004682234927 0.0006531678641410843 0.002256248889874221 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 1428 14614 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48546993586 61.373 2 0.16269899795095316 0.0006531678641410843 0.0022563253968332364 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 36415 21038 GVFPDNFVKL True PC9_epitope_Rep5 1134.60734536118 1134.6062499358602 85.982 2 0.16269697939977712 0.0006531678641410843 0.002256430438188653 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 125058 9445 VIDQQNGLY True H1975_Epitope_Rep3 1048.5189242795998 1048.51837496793 41.332 1 0.16269633253801333 0.0006531678641410843 0.002256464100611516 ['ENSG00000132383|ENST00000254719|RPA1'] 86181 10305 QIFNGTFVK True NCI_RA007_Epitope_Rep4 1052.5654805492 1052.5643899358602 46.494 2 0.1626943001285481 0.0006531678641410843 0.0022565698696379523 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 115597 19742 TRTNMLLEL True PC9_epitope_Rep3 1089.58523001761 1089.5841299358601 81.165 2 0.16269020780421653 0.0006531678641410843 0.0022567828541350788 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 52558 19636 KLGDFGLATV True PC9_epitope_Rep3 1019.5651461960299 1019.56404993586 80.767 2 0.16268771573983978 0.0006531678641410843 0.0022569125631476013 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 73375 10257 MTEPIDEY True H1975_Epitope_Rep3 996.4110136233999 996.41046496793 44.502 1 0.16268644960649326 0.0006531678641410843 0.0022569784667492245 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 140728 13599 YSDAFLNDSY True H1975_Epitope_Rep2 1193.48768372097 1193.4865899358601 57.445 2 0.1626839301957834 0.0006531678641410843 0.002257109610504907 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 43073 13929 IEVIEIMTDR True NCI_RA007_Epitope_Rep2 1217.63257413285 1217.6314699358602 58.836 2 0.16267821784531913 0.0006531678641410843 0.002257406985660899 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 133986 6688 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5281849037901 33.388 3 0.16267071077203304 0.0006531678641410843 0.0022577978505368902 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 106189 8294 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.53367496793 36.854 1 0.16267009511920966 0.0006531678641410843 0.0022578299082480586 ['ENSG00000114315|ENST00000232424|HES1'] 111764 22554 TIITTLENL True PC9_epitope_Rep5 1016.57537652656 1016.57426993586 91.757 2 0.16266186034168317 0.0006531678641410843 0.002258258745787802 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 141384 8924 YTEEDAVSY True H1975_Epitope_Rep3 1075.43458551895 1075.43348993586 39.324 2 0.16266171095741733 0.0006531678641410843 0.0022582665259336184 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 15004 15470 DYKESFNTI True PC9_epitope_Rep5 1115.5135045459901 1115.5124099358602 64.516 2 0.1626596033152046 0.0006531678641410843 0.0022583762978034966 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 95192 15760 RVIEGDVVSAL True PC9_epitope_Rep4 1156.6451874218799 1156.6440899358602 68.544 2 0.16265742329075178 0.0006531678641410843 0.0022584898451513367 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 17322 17250 EHALLAYTL True PC9_epitope_Rep6 1029.5494961318898 1029.54838993586 78.951 2 0.16265410381598963 0.0006531678641410843 0.0022586627521294558 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 106930 9357 SVDSHFQEV True PC9_epitope_Rep2 1046.4668887067398 1046.4657899358601 41.328 2 0.1626530946636753 0.0006531678641410843 0.0022587153201387364 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 89575 6366 QYNPHVHQL True PC9_epitope_Rep1 1134.55704112382 1134.55540490379 29.296 3 0.162648881627599 0.0006531678641410843 0.0022589347956759242 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 77372 12312 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45826993586 52.442 2 0.1626488687310594 0.0006531678641410843 0.00225893546754598 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 141238 8318 YTDATPLRV True H1975_Epitope_Rep3 1034.53965972418 1034.53856993586 36.978 2 0.16264161026564095 0.0006531678641410843 0.002259313642957553 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 117952 14883 TYADTLNHL True PC9_epitope_Rep5 1046.5032742154601 1046.5021699358601 62.251 2 0.16264154464674654 0.0006531678641410843 0.002259317062075124 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 111188 19185 THIETVINAL True PC9_epitope_Rep5 1109.60807363717 1109.6069699358602 78.833 2 0.16262586113169034 0.0006531678641410843 0.002260134410712203 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENST00000524952.2_1_11:985541-988707:+|nuORF'] 87862 13996 QRIAEETIL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 58.857 2 0.1626209787666357 0.0006531678641410843 0.002260388916167877 ['ENSG00000145945|ENST00000648326|FAM50B'] 106861 9019 SVATGFSRV True PC9_epitope_Rep2 922.4872302284999 922.48612993586 40.041 2 0.1626202409701317 0.0006531678641410843 0.0022604273781413713 ['ENST00000248923.8_1_22:25006313-25006394:+|nuORF', 'ENST00000411974.5_3_22:25003943-25006394:+|nuORF', 'ENST00000447416.5_3_22:25003608-25006394:+|nuORF', 'ENST00000438643.6_1_22:24999197-25006394:+|nuORF', 'ENST00000432867.5_1_22:25003608-25006394:+|nuORF'] 118237 9784 TYLEKAIKI True NCI_RA007_Epitope_Rep2 1077.6433965167298 1077.6422899358602 42.679 2 0.1626192208577085 0.0006531678641410843 0.0022604805585664488 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 20070 12729 EMEEKYYRF True PC9_epitope_Rep1 1293.5699738762899 1293.5688699358602 53.836 2 0.1626164404375067 0.0006531678641410843 0.0022606255135734347 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 90947 6078 REYQLNDSAA True NCI_RA007_Epitope_Rep1 1165.53636524889 1165.53526993586 27.68 2 0.16260616478985518 0.0006531678641410843 0.0022611613069291963 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 140805 8809 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.4803699358602 38.891 2 0.16259916564729773 0.0006531678641410843 0.002261526329232944 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 91957 6573 RKPDGTVLL True NCI_RA007_Epitope_Rep4 997.59202965021 997.59092993586 31.901 2 0.1625951960877 0.0006531678641410843 0.002261733377584095 ['ENSG00000066056|ENST00000372476|TIE1', 'TIE1|p.T513Dfs*32|1|0.38|ENSG00000066056|chr1:43312033-43312034|-/A|frameshift_variant'] 52717 18393 KMIEDLQNEL True PC9_epitope_Rep3 1231.61183868827 1231.6107499358602 75.956 2 0.16259444782029298 0.0006531678641410843 0.002261772408602773 ['ENSG00000198887|ENST00000361138|SMC5'] 114242 5538 TPMPSRPSTTP True NCI_RA007_Epitope_Rep5 1170.57030822946 1170.56920993586 27.988 2 0.1625877884802034 0.0006531678641410843 0.0022621198018084572 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 48507 9262 KAINQGGLTSV True PC9_epitope_Rep5 1086.6033226099 1086.6022299358601 40.575 2 0.16258539710380626 0.0006531678641410843 0.002262244564102997 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 109846 14137 TEELPQLINA True H1975_Epitope_Rep3 1126.5870038394198 1126.5859099358602 59.709 2 0.1625731769879666 0.0006531678641410843 0.002262882216291877 ['ENSG00000139684|ENST00000378720|ESD'] 105049 12865 SRDPNYLNL True PC9_epitope_Rep6 1090.54072235334 1090.5396299358601 61.003 2 0.16256281560199481 0.0006531678641410843 0.0022634230196514754 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 38999 9121 HHMGGMAGL True PC9_epitope_Rep5 909.3949271501299 909.39382993586 40.03 2 0.16256083103899527 0.0006531678641410843 0.002263526616894225 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 87467 9660 QQDPQQYNV True PC9_epitope_Rep1 1118.49925146418 1118.49814993586 42.013 2 0.162559631914652 0.0006531678641410843 0.0022635892153265837 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 46631 16759 ITDIQIPLDY True H1975_Epitope_Rep1 1189.6230549949698 1189.62247496793 69.863 1 0.1625595989430561 0.0006531678641410843 0.0022635909365822044 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 107092 10204 SVHKGFAFV True PC9_epitope_Rep2 990.5287011176598 990.52760993586 44.586 2 0.1625523598167637 0.0006531678641410843 0.0022639688810095486 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 28824 18583 FSWEGAFQHV True PC9_epitope_Rep6 1206.54580773378 1206.54470993586 84.121 2 0.16254716628157062 0.0006531678641410843 0.0022642400668963524 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 107098 9700 SVHKGFAFV True PC9_epitope_Rep4 990.5287011176598 990.52760993586 44.946 2 0.16254650302427825 0.0006531678641410843 0.0022642747019086056 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 101504 19400 SLLDPVPEV True PC9_epitope_Rep6 967.52261267771 967.52150993586 87.277 2 0.16254611921459072 0.0006531678641410843 0.002264294744528201 ['ENSG00000089154|ENST00000300648|GCN1'] 77146 4637 NRPGTVSSL True PC9_epitope_Rep6 929.49304388493 929.49194993586 25.149 2 0.1625386639394515 0.0006531678641410843 0.0022646840956713652 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 139132 15153 YLDQMEDLY True H1975_Epitope_Rep1 1188.50089125696 1188.49978993586 63.545 2 0.1625354600991077 0.0006531678641410843 0.002264851436525472 ['ENSG00000198356|ENST00000357332|GET3'] 23979 13537 EYMEHVYLI True NCI_RA007_Epitope_Rep4 1195.5583465634297 1195.55724993586 59.277 2 0.16252921824825656 0.0006531678641410843 0.0022651774922040854 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 17398 17371 EHDPQYAVIL True PC9_epitope_Rep2 1183.5873381925899 1183.58624993586 72.075 2 0.16251898814494048 0.0006531678641410843 0.0022657119837325487 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 2533 4265 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 21.523 2 0.16251641281619522 0.0006531678641410843 0.0022658465566160494 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 71084 21399 LYLEPQGTLF True PC9_epitope_Rep4 1179.6175756917098 1179.61646993586 90.482 2 0.1625022597157271 0.0006531678641410843 0.0022665862643880133 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 125029 7575 VIDDTNITR True PC9_epitope_Rep1 1045.5403880001702 1045.53928993586 33.955 2 0.16248990956925494 0.0006531678641410843 0.0022672319384192435 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 126661 6673 VLNTNIDGR True PC9_epitope_Rep4 1000.53015766964 1000.52906993586 32.843 2 0.16248818190326764 0.0006531678641410843 0.0022673222766200767 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 7994 10314 ATDIKITVY True H1975_Epitope_Rep2 1022.5648118428601 1022.56370993586 44.679 2 0.16248214410594292 0.0006531678641410843 0.0022676380162110392 ['ENSG00000124596|ENST00000424266|OARD1'] 108927 11009 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53856993586 47.435 2 0.16247575461289065 0.0006531678641410843 0.0022679721951672847 ['ENSG00000183751|ENST00000568546|TBL3'] 76392 13157 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52838993586 55.473 2 0.16247513620728116 0.0006531678641410843 0.0022680045412120002 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 84238 21078 PYMDSPQSIGF True PC9_epitope_Rep1 1240.5434247752798 1240.54287496793 85.91 1 0.16247106339898293 0.0006531678641410843 0.002268217583199709 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 40851 9970 HSDVTEAMLY True H1975_Epitope_Rep3 1164.512124647 1164.51102993586 43.383 2 0.16246447725431964 0.0006531678641410843 0.002268562136043242 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 104329 7410 SQIQEFKEA True PC9_epitope_Rep4 1078.5294889632999 1078.52838993586 35.85 2 0.1624508909985875 0.0006531678641410843 0.0022692730635185615 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 71749 12207 MEENPGIFA True H1975_Epitope_Rep3 1006.4429824580199 1006.44188993586 52.126 2 0.16244982154940296 0.0006531678641410843 0.002269329033994583 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 75130 12892 NHYNMQYAL True PC9_epitope_Rep4 1152.50222866964 1152.50112993586 57.468 2 0.16243529290475137 0.0006531678641410843 0.0022700895388670594 ['ENSG00000241945|ENST00000291576|PWP2'] 115604 13685 TRTSQVLVI True PC9_epitope_Rep5 1015.6025943339098 1015.60148993586 57.666 2 0.1624320033580283 0.0006531678641410843 0.0022702617662156 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'ENST00000521468.1_1_8:124195447-124212099:+|nuORF'] 53379 11683 KQTDVLQQL True PC9_epitope_Rep6 1071.59242357303 1071.5913299358601 56.07 2 0.16242986155057604 0.0006531678641410843 0.0022703739096001257 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54870 21903 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 89.29 2 0.162417530184469 0.0006531678641410843 0.00227101967808717 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 65323 8182 LRDEHNYTL True PC9_epitope_Rep5 1159.56218607391 1159.56055490379 36.412 3 0.16240025686361 0.0006531678641410843 0.002271924555262833 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 17318 19029 EHALLAYTL True PC9_epitope_Rep2 1029.5494961318898 1029.54838993586 78.56 2 0.16239644029553948 0.0006531678641410843 0.002272124537919186 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 104726 5012 SQVEGEHQL True PC9_epitope_Rep3 1025.47778774361 1025.4766899358601 24.37 2 0.16238037003229197 0.0006531678641410843 0.00227296678947649 ['ENSG00000117724|ENST00000366955|CENPF'] 93621 8555 RQPYAVSEL True NCI_RA007_Epitope_Rep4 1061.5505587610498 1061.54946993586 39.694 2 0.16237251482053575 0.0006531678641410843 0.002273378599055214 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 60874 20084 LHYGLPVVV True PC9_epitope_Rep1 995.5804023373499 995.57930993586 82.081 2 0.16237001398134962 0.0006531678641410843 0.0022735097212262757 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 121638 13039 VFIDKQTNL True PC9_epitope_Rep1 1076.5866099166 1076.58550993586 55.024 2 0.16236504197561993 0.0006531678641410843 0.0022737704322401456 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 141369 7084 YTEEDAASY True H1975_Epitope_Rep1 1047.40328539067 1047.4021899358602 32.275 2 0.16233708370897953 0.0006531678641410843 0.0022752370021903575 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 104699 16298 SQVDRLVAL True PC9_epitope_Rep1 999.5712942056298 999.57018993586 67.509 2 0.1623354801972718 0.0006531678641410843 0.0022753211441429917 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 11767 10575 DHDIPQQL True PC9_epitope_Rep4 964.46140940348 964.46030993586 48.416 2 0.16231052449042546 0.0006531678641410843 0.0022766310594787716 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 5429 7471 ALTSELANAR True NCI_RA007_Epitope_Rep2 1044.55637241748 1044.55526993586 33.689 2 0.16230911803221046 0.0006531678641410843 0.0022767049063479225 ['ENSG00000147065|ENST00000360270|MSN'] 106173 12542 STDPLDAGVDY True H1975_Epitope_Rep3 1151.4982484046698 1151.49714993586 53.442 2 0.16230568611375307 0.0006531678641410843 0.0022768851111764615 ['ENSG00000139645|ENST00000267116|ANKRD52'] 116094 5194 TSREVQTAV True PC9_epitope_Rep5 989.5141732523299 989.51306993586 24.996 2 0.16230498325307713 0.0006531678641410843 0.0022769220190817915 ['ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1'] 115049 13083 TRDAGYGGLSL True PC9_epitope_Rep6 1108.5512870370399 1108.55018993586 61.931 2 0.16229865473788196 0.0006531678641410843 0.0022772543625612833 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 37913 9352 GYSFTTTAER True PC9_epitope_Rep2 1131.51965255559 1131.5185499358602 41.309 2 0.16229835471034126 0.0006531678641410843 0.002277270119782206 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 142108 12057 YVPETVYRV True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 57.69 2 0.1622944572614398 0.0006531678641410843 0.0022774748207682865 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 117280 9799 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep2 1134.59546072858 1134.5943699358602 43.029 2 0.16229294891299798 0.0006531678641410843 0.0022775540468600096 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 73378 6978 MTERQALSY True H1975_Epitope_Rep3 1097.5175443806097 1097.51644993586 31.802 2 0.1622850822358959 0.0006531678641410843 0.0022779672891768687 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000480468.1_1_11:116728475-116732017:-|nuORF', 'nc|ENSG00000160584|Q9Y2K2-6|SIK3'] 115437 14811 TRMPDGPVAL True PC9_epitope_Rep1 1055.54336520563 1055.54226993586 61.791 2 0.16228389817596436 0.0006531678641410843 0.002278029495199563 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 2921 4952 AEYNGRLAA True NCI_RA007_Epitope_Rep3 963.4773938207899 963.47628993586 26.473 2 0.16227016148850737 0.0006531678641410843 0.0022787512927877856 ['ENSG00000101413|ENST00000373433|RPRD1B'] 47385 17013 IVIRGLNTI True PC9_epitope_Rep2 997.62841515893 997.62730993586 70.692 2 0.16225986784143195 0.0006531678641410843 0.0022792923247492453 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 140018 6474 YQDTPKQI True PC9_epitope_Rep5 991.4974605590298 991.49636993586 29.875 2 0.1622445350658409 0.0006531678641410843 0.0022800984502380087 ['ENSG00000048162|ENST00000614830|NOP16'] 77216 18225 NRTELPLTL True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 75.114 2 0.16224308256742992 0.0006531678641410843 0.002280174830566972 ['ENSG00000105447|ENST00000253237|GRWD1'] 46043 11936 ISGLIYEETR True PC9_epitope_Rep6 1179.6135529404298 1179.61244993586 57.158 2 0.16223565110206908 0.0006531678641410843 0.0022805656577556672 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 113724 10873 TLYVGNLSR True PC9_epitope_Rep4 1021.5556441414899 1021.55454993586 49.586 2 0.1622320777811322 0.0006531678641410843 0.0022807536056212146 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 90114 6852 REAQSLISA True NCI_RA007_Epitope_Rep2 973.5192586327698 973.51816993586 31.269 2 0.16222983127833043 0.0006531678641410843 0.0022808717740493054 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 21128 5631 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 27.044 2 0.162220789481046 0.0006531678641410843 0.0022813474440282855 ['ENSG00000092148|ENST00000399332|HECTD1'] 140185 7844 YQTEKGITV True PC9_epitope_Rep4 1037.5393253710097 1037.53822993586 37.585 2 0.16221669096146676 0.0006531678641410843 0.0022815630911861536 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 1074 5684 AEAIHSPQV True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 26.862 2 0.1622156141562555 0.0006531678641410843 0.002281619751603389 ['ENSG00000047410|ENST00000367478|TPR'] 111066 14388 THDITTISI True PC9_epitope_Rep4 999.52367530687 999.52256993586 63.253 2 0.1622151893054101 0.0006531678641410843 0.002281642107218295 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 39127 11732 HHYEGAVVIL True PC9_epitope_Rep6 1136.5978433066398 1136.59674993586 56.279 2 0.16221157821416585 0.0006531678641410843 0.0022818321313644017 ['ENSG00000163655|ENST00000496455|GMPS'] 59782 15487 LGEHNIDVLEG True PC9_epitope_Rep5 1194.5880664685799 1194.58696993586 64.58 2 0.16220902120625652 0.0006531678641410843 0.0022819666967193435 ['CON__P00761'] 132031 8705 VTSTFIIEK True NCI_RA007_Epitope_Rep5 1036.5804619069997 1036.57936993586 40.15 2 0.1622052319190616 0.0006531678641410843 0.002282166126708799 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 68325 16039 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.5222499358601 67.032 2 0.16220482039307774 0.0006531678641410843 0.002282187786348338 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 45617 9479 IRAPSGTSL True PC9_epitope_Rep5 900.50288029264 900.50178993586 41.417 2 0.16220196767998174 0.0006531678641410843 0.0022823379374046003 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 86310 9220 QITQINHGL True PC9_epitope_Rep2 1022.5508931142199 1022.5497899358601 40.804 2 0.1621997188987007 0.0006531678641410843 0.002282456307783814 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 15078 20727 DYSSILQKF True PC9_epitope_Rep2 1099.55497543515 1099.5538699358601 85.164 2 0.1621892769011202 0.0006531678641410843 0.0022830060295201625 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 118367 13810 TYNPAFSRL True PC9_epitope_Rep2 1067.53999407735 1067.5388899358602 58.404 2 0.1621874429935104 0.0006531678641410843 0.0022831025897289145 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 1285 7693 AEDPETQVV True H1975_Epitope_Rep2 986.4556553166999 986.4551049679301 34.544 1 0.16218724301562112 0.0006531678641410843 0.002283113119353809 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 77071 18670 NRLEEPGNFVL True PC9_epitope_Rep2 1286.6619001151798 1286.66080993586 77.181 2 0.16218313551192684 0.0006531678641410843 0.0022833294063631057 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 94964 16817 RTLETLIRL True PC9_epitope_Rep2 1113.6869926642098 1113.6858899358601 69.935 2 0.16218225972655173 0.0006531678641410843 0.002283375524854798 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 108458 20876 SYLSSILRF True PC9_epitope_Rep4 1084.59169529704 1084.5905899358602 88.455 2 0.16218115598890032 0.0006531678641410843 0.0022834336485436225 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 118502 10481 TYQDIQNTI True NCI_RA007_Epitope_Rep3 1094.52440358286 1094.52387496793 48.286 1 0.1621713938956163 0.0006531678641410843 0.002283947792379107 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 128757 20847 VPYLVGQVV True PC9_epitope_Rep3 972.5644179200399 972.56332993586 85.461 2 0.16217051201681745 0.0006531678641410843 0.0022839942443171443 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 62622 21696 LLLDVPTAAV True PC9_epitope_Rep5 1010.6011973515799 1010.60010993586 88.501 2 0.162167789330216 0.0006531678641410843 0.002284137664616909 ['ENSG00000216490|ENST00000407280|IFI30'] 139268 22069 YLIPDIDLKL True PC9_epitope_Rep5 1201.69582601241 1201.69472993586 89.916 2 0.1621552161306985 0.0006531678641410843 0.002284800087480184 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 47968 23614 IYIWDLNNF True PC9_epitope_Rep5 1196.5866099165999 1196.58550993586 95.81 2 0.16215067885421516 0.0006531678641410843 0.002285039182407213 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 130918 9864 VTDESIPSY True H1975_Epitope_Rep2 1009.4604063439699 1009.4598749679301 42.928 1 0.1621463735925994 0.0006531678641410843 0.002285266074263442 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant'] 134108 20464 VYKVPPFTF True PC9_epitope_Rep3 1096.59571804832 1096.5946299358602 83.971 2 0.16213690302376285 0.0006531678641410843 0.002285765262513105 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 124735 19153 VHAPPMQLGF True PC9_epitope_Rep3 1095.5535359665098 1095.5524299358601 78.894 2 0.1621361358059404 0.0006531678641410843 0.0022858057068943505 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 141956 19250 YVIEDDVNM True PC9_epitope_Rep1 1096.47467650912 1096.47356993586 78.845 2 0.1621332741164347 0.0006531678641410843 0.002285956569005459 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 98254 10578 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 45.71 2 0.16211704942267888 0.0006531678641410843 0.002286812088044027 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 11714 14825 DHARLQLQL True PC9_epitope_Rep1 1092.60399131624 1092.60288993586 61.846 2 0.1621083732398708 0.0006531678641410843 0.002287269709578874 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 53149 15279 KPYNVYITV True PC9_epitope_Rep4 1095.59644632431 1095.5953499358602 66.699 2 0.16210825583361063 0.0006531678641410843 0.0022872759027490175 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 95684 14446 RYFENPQVI True PC9_epitope_Rep4 1164.5927579262 1164.5916699358602 63.475 2 0.1620978606009023 0.0006531678641410843 0.002287824316799863 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 7613 3964 ASFQSTSVK True NCI_RA007_Epitope_Rep4 953.4818104948899 953.48070993586 21.486 2 0.16209174841246005 0.0006531678641410843 0.0022881468345977733 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1', 'nc|ENSG00000050405|Q9UHB6-3|LIMA1', 'nc|ENSG00000050405|Q9UHB6-2|LIMA1', 'nc|ENSG00000050405|Q9UHB6-5|LIMA1'] 118686 13321 TYTDVTPRQF True PC9_epitope_Rep1 1226.59315184902 1226.5920499358601 56.099 2 0.16209073456584014 0.0006531678641410843 0.0022882003359627656 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 108709 11028 SYREDPIVY True PC9_epitope_Rep6 1140.5451390274397 1140.5440499358601 53.323 2 0.16209030483212009 0.0006531678641410843 0.002288223013676071 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 86675 19293 QLIDIIHTA True PC9_epitope_Rep5 1022.5760452329 1022.57494993586 79.254 2 0.16208957823626902 0.0006531678641410843 0.002288261357774159 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 8928 12160 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6965849037902 54.59 3 0.16208856153817097 0.0006531678641410843 0.0022883150122982197 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 94913 18349 RTFDETVSTYV True PC9_epitope_Rep1 1316.62484590012 1316.6237499358601 75.368 2 0.1620885230229219 0.0006531678641410843 0.0022883170449001164 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 26420 18903 FIAKSFYDL True PC9_epitope_Rep4 1102.5698972233 1102.5688099358601 80.797 2 0.16208663537004858 0.0006531678641410843 0.0022884166660123877 ['ENSG00000176153|ENST00000389614|GPX2'] 85066 9743 QEISHLIEP True NCI_RA007_Epitope_Rep4 1064.55022440788 1064.54912993586 44.322 2 0.1620851364502428 0.0006531678641410843 0.00228849577477572 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 90716 13670 REQQLISAVFP True H1975_Epitope_Rep2 1286.6982856238997 1286.69718993586 57.722 2 0.16208076906004557 0.0006531678641410843 0.00228872628890161 ['ENST00000577961.5_1_18:756649-756733:-|nuORF', 'ENST00000418510.1_1_22:26043331-26044389:+|nuORF'] 27545 7424 FNDPNAKEM True PC9_epitope_Rep1 1064.45969515132 1064.4585899358601 33.372 2 0.1620779958963888 0.0006531678641410843 0.0022888726705981174 ['ENSG00000056097|ENST00000265069|ZFR'] 2085 12570 AELENLVNQAA True H1975_Epitope_Rep2 1170.58806646858 1170.58747496793 53.444 1 0.1620712455661492 0.0006531678641410843 0.0022892290264922275 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 92290 23429 RLLDVLAPLVL True PC9_epitope_Rep5 1220.7856440763198 1220.78454993586 95.101 2 0.1620692992332044 0.0006531678641410843 0.0022893317854221005 ['ENSG00000182871|ENST00000651438|COL18A1'] 101500 21264 SLLDPVPEV True PC9_epitope_Rep2 967.52261267771 967.52150993586 87.252 2 0.1620640689360171 0.0006531678641410843 0.0022896079479269517 ['ENSG00000089154|ENST00000300648|GCN1'] 106410 3215 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 17.961 3 0.16205948860849753 0.0006531678641410843 0.002289849819019812 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 116883 20292 TVFDEAIRAV True PC9_epitope_Rep1 1119.59242357303 1119.5913299358601 82.88 2 0.16205087593557682 0.0006531678641410843 0.002290304693317507 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 2400 7778 AEQEPTAEQLA True H1975_Epitope_Rep1 1185.55134660669 1185.5502499358602 34.872 2 0.16204996269963598 0.0006531678641410843 0.002290352930740655 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 97540 8974 SEEPLLHVA True H1975_Epitope_Rep2 993.51311062317 993.51200993586 39.474 2 0.1620489814277085 0.0006531678641410843 0.002290404762978305 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant'] 97411 11414 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43816993586 48.953 2 0.16204688566209635 0.0006531678641410843 0.0022905154683486822 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 82934 14262 PSDLTVGQFY True H1975_Epitope_Rep3 1125.5342399905699 1125.53367496793 60.201 1 0.16204610873961423 0.0006531678641410843 0.002290556509358801 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 92365 18006 RLPETLPSL True PC9_epitope_Rep2 1024.59169529704 1024.5905899358602 74.564 2 0.16204401932028353 0.0006531678641410843 0.0022906668867949623 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 27121 21448 FLIQHLPLV True PC9_epitope_Rep1 1078.65390163078 1078.6528099358602 87.338 2 0.162042804687439 0.0006531678641410843 0.002290731054461394 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 87880 13944 QRIDEFEAM True PC9_epitope_Rep4 1137.5124590001699 1137.51136993586 61.54 2 0.16202973121579178 0.0006531678641410843 0.002291421824742578 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 108735 19222 SYRQVAFDF True PC9_epitope_Rep3 1131.5349086969097 1131.53380993586 79.157 2 0.16202920865992168 0.0006531678641410843 0.0022914494396422884 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 2125 11926 AELNAQIITA True H1975_Epitope_Rep1 1042.56587447202 1042.56476993586 50.876 2 0.16201959899419222 0.0006531678641410843 0.002291957329706317 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 88573 6229 QTDKLKELY True H1975_Epitope_Rep1 1136.6077392839998 1136.6060849037901 29.028 3 0.16201232099489013 0.0006531678641410843 0.002292342061378163 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 40034 10729 HPTEDLVVSA True PC9_epitope_Rep1 1066.5294889632999 1066.52838993586 46.157 2 0.1620105136382518 0.0006531678641410843 0.0022924376123800968 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 2381 2816 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 14.901 2 0.16200602289461316 0.0006531678641410843 0.0022926750454248766 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 97516 5034 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39670993586 24.484 2 0.16198869478471906 0.0006531678641410843 0.00229359144158676 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 108594 22680 SYPDLLPTF True PC9_epitope_Rep2 1051.52261267771 1051.5215099358602 92.732 2 0.1619881099621786 0.0006531678641410843 0.002293622376278469 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 17531 20332 EHGIVVFSL True PC9_epitope_Rep2 999.5389314481899 999.53782993586 83.629 2 0.16198669637328336 0.0006531678641410843 0.002293697151001445 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 99208 13850 SHLQQPLMV True PC9_epitope_Rep1 1051.54845058607 1051.5473499358602 58.116 2 0.16197685936744255 0.0006531678641410843 0.0022942175673225287 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 127400 9192 VNELTEFAK True NCI_RA007_Epitope_Rep2 1049.53932537101 1049.53822993586 40.362 2 0.161969729529279 0.0006531678641410843 0.0022945948375560814 ['CON__P02769'] 121698 11982 VFLENVIR True H1975_Epitope_Rep2 988.5705659296399 988.56946993586 51.169 2 0.16196509858174415 0.0006531678641410843 0.002294839914001057 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 74717 7431 NGVLEGIR True H1975_Epitope_Rep3 856.4766655448 856.47556993586 33.562 2 0.1619638321498586 0.0006531678641410843 0.0022949069399626973 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'MYH6|p.C707Y|1|0.11|ENSG00000197616|chr14:23397011-23397011|C/T|missense_variant', 'MYH1|p.R698M|1|0.78|ENSG00000109061|chr17:10505893-10505893|C/A|missense_variant', 'MYH1|p.I708M|2|0.1|ENSG00000109061|chr17:10505862-10505862|G/C|missense_variant', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant', 'MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant', 'ENSG00000109061|ENST00000226207|MYH1', 'MYH1|p.T1278Qfs*18|1|0.3|ENSG00000109061|chr17:10500660-10500660|G/-|frameshift_variant', 'MYH1|p.E1318Nfs*2|1|0.26|ENSG00000109061|chr17:10499006-10499006|C/-|frameshift_variant', 'MYH1|p.E865Kfs*20|1|0.33|ENSG00000109061|chr17:10504909-10504909|T/-|frameshift_variant', 'GAS7-MYH1|1|fusion', 'ENSG00000109063|ENST00000583535|MYH3', 'MYH3|p.L993*|1|0.11|ENSG00000109063|chr17:10639422-10639422|A/-|frameshift_variant', 'MYH3|p.C793Afs*31|1|0.13|ENSG00000109063|chr17:10640382-10640382|A/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'MYH8|p.A1159Qfs*8|1|0.3|ENSG00000133020|chr17:10400650-10400650|C/-|frameshift_variant', 'ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.D1019Tfs*6|1|0.18|ENSG00000264424|chr17:10453208-10453208|C/-|frameshift_variant', 'ENSG00000078814|ENST00000262873|MYH7B', 'nc|ENSG00000078814|A7E2Y1|MYH7B'] 134890 10738 VYVQNVVKL True NCI_RA007_Epitope_Rep5 1060.6280808057597 1060.6269899358601 47.941 2 0.16196144009182853 0.0006531678641410843 0.0022950335450721165 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 44011 13996 IIGTIFIIK True NCI_RA007_Epitope_Rep3 1016.6634036853198 1016.66230993586 62.362 2 0.161961105603289 0.0006531678641410843 0.0022950512491946044 ['ENSG00000204287|ENST00000395388|HLA-DRA'] 93368 8531 RPYQPLPEA True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 42.561 2 0.16195148353545338 0.0006531678641410843 0.0022955605934284655 ['ENSG00000165476|ENST00000373758|REEP3'] 7164 4938 AQYEDIAQK True NCI_RA007_Epitope_Rep5 1064.5138388991597 1064.51274993586 25.694 2 0.1619509309492938 0.0006531678641410843 0.0022955898480098796 ['ENSG00000167768|ENST00000252244|KRT1'] 105443 9243 SRTSIQSEL True PC9_epitope_Rep5 1019.52473793603 1019.52364993586 40.5 2 0.1619487695825745 0.0006531678641410843 0.0022957042769627947 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 8930 12120 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6971299358602 54.427 2 0.1619486045457333 0.0006531678641410843 0.0022957130147206713 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 17529 20703 EHGIVVFSL True PC9_epitope_Rep1 999.5389314481899 999.53782993586 84.46 2 0.1619411754497822 0.0006531678641410843 0.0022961063773218227 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 93596 9368 RQPDSGISSI True PC9_epitope_Rep1 1058.5356369729 1058.53452993586 40.891 2 0.16194056387897263 0.0006531678641410843 0.0022961387623349054 ['ENSG00000163902|ENST00000296255|RPN1'] 87983 13821 QRNEVVVEL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 58.006 2 0.16193993560760658 0.0006531678641410843 0.0022961720321815235 ['ENSG00000186432|ENST00000334256|KPNA4'] 137670 13175 YEIPSNLTP True H1975_Epitope_Rep2 1032.51277627 1032.51166993586 55.802 2 0.16193974700088418 0.0006531678641410843 0.0022961820198653792 ['ENSG00000069248|ENST00000261396|NUP133'] 108576 21261 SYNPLWLRI True PC9_epitope_Rep5 1160.6342288153598 1160.63312993586 86.831 2 0.1619276413187412 0.0006531678641410843 0.0022968231680223984 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 76514 14208 NQIKEFIYA True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 66.537 2 0.16192569937882298 0.0006531678641410843 0.0022969260348160597 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 111081 6915 THDQAVQAL True PC9_epitope_Rep1 981.4879585044899 981.48686993586 31.404 2 0.16192120562524243 0.0006531678641410843 0.0022971640917672596 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 141330 8724 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.42897496793 38.518 1 0.1619098313441739 0.0006531678641410843 0.0022977667553677667 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 141315 12655 YTDSSSILNY True H1975_Epitope_Rep2 1161.51898384925 1161.51847496793 53.775 1 0.1619098092559664 0.0006531678641410843 0.0022977679258598957 ['ENSG00000111647|ENST00000279907|BLTP3B'] 104642 11302 SQSTVKVLI True PC9_epitope_Rep4 973.5807962601699 973.57968993586 51.249 2 0.1619075682510687 0.0006531678641410843 0.0022978866836621432 ['ENSG00000143621|ENST00000361891|ILF2'] 14144 10656 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep1 1086.45394144498 1086.45284993586 45.945 2 0.16190502806097537 0.0006531678641410843 0.002298021303630935 ['ENSG00000149823|ENST00000279281|VPS51'] 14947 9247 DYFEEYGK True H1975_Epitope_Rep1 1049.4341915961297 1049.4330899358602 40.48 2 0.1619034982785135 0.0006531678641410843 0.002298102379816526 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 113496 14532 TLTEEGVIKV True PC9_epitope_Rep2 1087.6124903112698 1087.6113899358602 61.169 2 0.16188987764252388 0.0006531678641410843 0.00229882437918813 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 20951 15597 EQPETYYKW True PC9_epitope_Rep3 1242.5557037111398 1242.55460993586 65.142 2 0.16188949010524928 0.0006531678641410843 0.0022988449249853595 ['ENSG00000164880|ENST00000404767|INTS1'] 58469 9224 LEPVAVELK True H1975_Epitope_Rep1 996.58554728744 996.58444993586 40.39 2 0.16188749269472455 0.0006531678641410843 0.0022989508232353468 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 89632 22521 QYSPLLAAF True PC9_epitope_Rep1 1008.5280324113198 1008.52692993586 91.429 2 0.1618861841145069 0.0006531678641410843 0.002299020203881544 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 74833 9663 NHEEEISTL True PC9_epitope_Rep5 1070.48801807414 1070.4869299358602 42.135 2 0.16188279408822162 0.0006531678641410843 0.002299199952087145 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 32158 8658 GEVLDPTAA True H1975_Epitope_Rep1 871.4287122928699 871.42816496793 38.232 1 0.16188138600490196 0.0006531678641410843 0.002299274616534957 ['ENSG00000140688|ENST00000327237|RUSF1', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 90142 6575 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 30.202 2 0.16188057430918204 0.0006531678641410843 0.0022993176582795038 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 25727 6616 FESPEVAER True NCI_RA007_Epitope_Rep2 1062.4981888350198 1062.49708993586 30.344 2 0.16186926759411344 0.0006531678641410843 0.0022999173025515926 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM', 'ENST00000602219.1_1_19:8553540-8553735:+|nuORF', 'ENST00000596295.1_1_19:8552895-8553735:+|nuORF'] 76712 16459 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53856993586 68.551 2 0.16186589544732546 0.0006531678641410843 0.002300096172405559 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 141839 5200 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 27.453 2 0.1618634811581884 0.0006531678641410843 0.00230022424284869 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 131111 12308 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.52277496793 52.429 1 0.16185589277281287 0.0006531678641410843 0.002300626829208066 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 104419 11911 SQLEEGKPGYL True PC9_epitope_Rep5 1219.6084675599898 1219.60736993586 50.813 2 0.16185323129670595 0.0006531678641410843 0.002300768045086003 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 27282 20002 FLQPELVKL True PC9_epitope_Rep2 1085.6484818971699 1085.64738993586 82.34 2 0.16184980943575752 0.0006531678641410843 0.002300949619124075 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 76803 5917 NRAPNTAEL True PC9_epitope_Rep3 984.4988575413599 984.49776993586 27.821 2 0.1618493312349137 0.0006531678641410843 0.0023009749950118653 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 40498 11959 HRDSGILGL True PC9_epitope_Rep2 966.5246783663799 966.52358993586 51.321 2 0.16184665447169005 0.0006531678641410843 0.0023011170435108 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 93364 9037 RPYQPLPEA True PC9_epitope_Rep4 1069.55564414149 1069.5545499358602 42.333 2 0.1618464905946757 0.0006531678641410843 0.002301125740300072 ['ENSG00000165476|ENST00000373758|REEP3'] 40855 5864 HSEAHTLLY True H1975_Epitope_Rep2 1069.51925863277 1069.5181699358602 27.541 2 0.16184249480614848 0.0006531678641410843 0.002301337802963259 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Nfs*41|1|0.31|ENSG00000068024|chr2:239053574-239053593|GTGCGCTGCAGGCAGCGCCA/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF', 'ENST00000460235.1_1_2:240024358-240029778:-|nuORF', 'ENST00000535493.5_1_2:240016681-240219867:-|nuORF', 'ENST00000493582.5_1_2:240016681-240274403:-|nuORF', 'ENST00000463007.5_1_2:240011659-240219867:-|nuORF'] 91591 22162 RILDIDIPLSV True PC9_epitope_Rep5 1252.7390878067201 1252.73798993586 90.283 2 0.16184040021842971 0.0006531678641410843 0.0023014489737654097 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 107106 9369 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 46.23 2 0.16183996104417403 0.0006531678641410843 0.0023014722837366233 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 39635 20809 HLPDAAALLPV True PC9_epitope_Rep5 1115.63389446219 1115.63278993586 85.092 2 0.16183883594458642 0.0006531678641410843 0.0023015320015166937 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 65832 15090 LSDLFSDDY True H1975_Epitope_Rep3 1073.45532096353 1073.45477496793 63.44 1 0.16183630658092427 0.0006531678641410843 0.002301666260158291 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 90691 6549 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 30.159 2 0.16183295879484455 0.0006531678641410843 0.0023018439726995195 ['ENSG00000129250|ENST00000320785|KIF1C'] 71535 6164 M[Oxidation]ADKNIQYY True H1975_Epitope_Rep3 1160.51721040788 1160.5161099358602 28.722 2 0.16182665548340605 0.0006531678641410843 0.0023021786123743316 ['ENSG00000148158|ENST00000374232|SNX30', 'ENST00000604751.1_1_9:115618996-115637523:+|nuORF'] 89814 13581 RALPELTKL True PC9_epitope_Rep5 1039.6389798426299 1039.6378899358601 57.262 2 0.16182394313188686 0.0006531678641410843 0.00230232262472633 ['ENSG00000173801|ENST00000393931|JUP'] 142435 20022 YYFEGIKQTF True PC9_epitope_Rep1 1294.6233893481397 1294.6228749679299 81.84 1 0.16182160985714072 0.0006531678641410843 0.0023024465171915254 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 9062 8734 AVIDVGINR True NCI_RA007_Epitope_Rep4 955.5450794577899 955.5439899358599 40.389 2 0.16181720743949 0.0006531678641410843 0.0023026802953615075 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 103069 5256 SPGLQKEAV True PC9_epitope_Rep2 927.5025459394699 927.50144993586 25.604 2 0.16181713245092463 0.0006531678641410843 0.0023026842776265287 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 54697 22899 KYLVIGDLLF True PC9_epitope_Rep1 1179.69034670915 1179.68924993586 92.879 2 0.16181374471029644 0.0006531678641410843 0.002302864190645629 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 9723 21618 AYGNVFSAF True PC9_epitope_Rep2 974.4497820906199 974.44923496793 88.628 1 0.1618134770247488 0.0006531678641410843 0.0023028784072425977 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 4619 16232 ALAAALAHI True PC9_epitope_Rep2 849.50723739709 849.50614993586 67.681 2 0.16180678654997477 0.0006531678641410843 0.0023032337622812173 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21', 'ENSG00000107625|ENST00000373585|DDX50'] 31568 8539 GEEIGAEMA True H1975_Epitope_Rep2 905.3800478482899 905.3794949679301 37.8 1 0.16180592784054953 0.0006531678641410843 0.0023032793753759327 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 104640 11904 SQSTVKVLI True PC9_epitope_Rep2 973.5807962601699 973.57968993586 51.113 2 0.16180350377573993 0.0006531678641410843 0.0023034081421928233 ['ENSG00000143621|ENST00000361891|ILF2'] 36866 19645 GVLKVFLENV True PC9_epitope_Rep6 1116.6542955536 1116.6531899358602 88.223 2 0.16179817148685913 0.0006531678641410843 0.0023036914197761766 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 74764 18124 NHDFQALAL True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 74.505 2 0.16179800591917462 0.0006531678641410843 0.0023037002161083358 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 18440 20816 EIYKEFFEV True PC9_epitope_Rep5 1202.58594121026 1202.5848499358601 85.118 2 0.16179389925919374 0.0006531678641410843 0.0023039184067732365 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 61992 19747 LLDPNVKSIFV True PC9_epitope_Rep4 1243.71762408615 1243.71652993586 84.08 2 0.16179295526148796 0.0006531678641410843 0.0023039685651677715 ['ENSG00000117419|ENST00000372257|ERI3', 'nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3'] 55005 17622 KYQIINEEF True PC9_epitope_Rep5 1182.5920892198599 1182.59098993586 72.794 2 0.16179137020109496 0.0006531678641410843 0.0023040527882548035 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 49432 7758 KEYAVNEVV True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 34.825 2 0.16178025350004888 0.0006531678641410843 0.0023046435669389657 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 85131 5524 QELQLKEA True NCI_RA007_Epitope_Rep3 957.5131106231698 957.51200993586 28.727 2 0.1617754665517817 0.0006531678641410843 0.0023048980079957626 ['ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 96627 15237 SAIDRIFTL True H1975_Epitope_Rep1 1034.5760452329 1034.57494993586 63.873 2 0.1617718221421707 0.0006531678641410843 0.00230509173841685 ['ENSG00000183576|ENST00000331768|SETD3'] 104095 20982 SQDYPTLAF True PC9_epitope_Rep2 1040.48147614172 1040.4803699358602 86.158 2 0.1617699142300119 0.0006531678641410843 0.0023051931661672753 ['ENSG00000134697|ENST00000373062|GNL2'] 129211 7149 VQTEVNREL True PC9_epitope_Rep2 1086.56693710118 1086.5658499358601 32.892 2 0.1617697064262994 0.0006531678641410843 0.002305204213623895 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 35252 6642 GRDENSVEL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 30.957 2 0.16176969999933805 0.0006531678641410843 0.00230520455530091 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 122071 22327 VFYPYPQYF True PC9_epitope_Rep5 1222.5698972232997 1222.56937496793 90.89 1 0.1617691559415691 0.0006531678641410843 0.002305233479267074 ['ENSG00000103160|ENST00000219439|HSDL1'] 22496 11927 ETFSYPESY True H1975_Epitope_Rep3 1121.4553209635299 1121.45477496793 51.031 1 0.1617670356566176 0.0006531678641410843 0.002305346204304833 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 133343 19045 VVVDPIQSV True PC9_epitope_Rep5 954.53859709502 954.53750993586 78.285 2 0.1617639670375903 0.0006531678641410843 0.002305509357315579 ['ENSG00000115233|ENST00000409682|PSMD14'] 71103 20950 LYLKALEGF True PC9_epitope_Rep1 1052.5906326678798 1052.5895299358601 85.406 2 0.16175862552930317 0.0006531678641410843 0.002305793383318344 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 131172 12202 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60556993586 51.955 2 0.16175553121692435 0.0006531678641410843 0.002305957934329208 ['ENSG00000168807|ENST00000336278|SNTB2'] 29307 16058 FVDDYTVRV True PC9_epitope_Rep2 1112.55022440788 1112.54912993586 67.023 2 0.16175433958294763 0.0006531678641410843 0.0023060213068117094 ['ENSG00000115233|ENST00000409682|PSMD14'] 25433 7322 FEDVAFDEKK True NCI_RA007_Epitope_Rep1 1226.5819184589798 1226.58028490379 32.473 3 0.16173715428363328 0.0006531678641410843 0.0023069354345476587 ['ENSG00000185624|ENST00000331483|P4HB'] 104724 21376 SQVEEELFSV True PC9_epitope_Rep5 1165.55028397753 1165.54918993586 87.284 2 0.161732236065263 0.0006531678641410843 0.0023071971131280017 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 72246 21819 MHHWLLFEM True PC9_epitope_Rep5 1242.5678061316598 1242.5667099358602 88.959 2 0.16173208348860504 0.0006531678641410843 0.0023072052315913478 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74'] 45040 4229 IPGSPPESM[Oxidation]GR True H1975_Epitope_Rep3 1142.53900848162 1142.5379099358602 21.385 2 0.16172785449109506 0.0006531678641410843 0.0023074302640094793 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 75107 12967 NHVTPPNVSL True PC9_epitope_Rep3 1076.56145779792 1076.56036993586 54.904 2 0.16172191424364804 0.0006531678641410843 0.002307746392087411 ['ENSG00000171223|ENST00000302754|JUNB'] 115397 12643 TRLEFQQQL True PC9_epitope_Rep6 1161.61422164677 1161.6131299358601 60.097 2 0.16171937928184288 0.0006531678641410843 0.0023078813108519725 ['ENSG00000171159|ENST00000372994|BBLN'] 53393 19550 KQVEEIFNL True PC9_epitope_Rep5 1118.5971746003 1118.5966749679299 80.252 1 0.161716096349996 0.0006531678641410843 0.0023080560506822246 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 9128 15305 AVIVWSFMK True NCI_RA007_Epitope_Rep5 1079.58377346563 1079.5826699358602 65.567 2 0.1617148148171465 0.0006531678641410843 0.002308124266112266 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 90500 4150 RELEVQHPAA True H1975_Epitope_Rep2 1148.59382055536 1148.59216490379 21.061 3 0.1617140782457783 0.0006531678641410843 0.0023081634743938053 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 117868 7691 TVYSGEEKL True PC9_epitope_Rep4 1024.5076908895599 1024.5065899358601 36.966 2 0.16170203662232097 0.0006531678641410843 0.0023088045539801697 ['ENSG00000166224|ENST00000373202|SGPL1'] 90609 2735 REMPVKVEA True H1975_Epitope_Rep2 1057.5590152697698 1057.5579099358602 14.579 2 0.16170128246482493 0.0006531678641410843 0.002308844710213873 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 54986 14000 KYQEVTNNLEF True PC9_epitope_Rep6 1383.6670450652698 1383.66594993586 65.708 2 0.1616999411940608 0.0006531678641410843 0.0023089161298877323 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 141069 10269 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.52184993586 44.55 2 0.1616945440241098 0.0006531678641410843 0.0023092035394481907 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 91545 17004 RIIDVVYNA True PC9_epitope_Rep1 1061.58694426977 1061.58584993586 70.228 2 0.16168762257890587 0.0006531678641410843 0.002309572171871722 ['ENSG00000142937|ENST00000396651|RPS8'] 43960 6219 IIEAEESR True NCI_RA007_Epitope_Rep1 945.47672511445 945.47562993586 28.226 2 0.16168515674689293 0.0006531678641410843 0.0023097035149518583 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF'] 26010 19557 FGFVTFDDHD True PC9_epitope_Rep4 1198.4931034545798 1198.49200993586 83.349 2 0.16168399270148986 0.0006531678641410843 0.0023097655206769283 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 96225 19408 RYPTSIASLAF True PC9_epitope_Rep4 1224.65027280232 1224.64916993586 82.763 2 0.16167128942797174 0.0006531678641410843 0.0023104422997141734 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 48444 13470 IYYTGKYQSL True PC9_epitope_Rep2 1234.6233893481399 1234.6222899358602 57.092 2 0.16166915479280033 0.0006531678641410843 0.002310556043883019 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant', 'MYCBP2|p.K641Gfs*11|1|0.09|ENSG00000005810|chr13:77257813-77257814|-/TTTTTCTTTTTGTTCCT|frameshift_variant'] 84188 11019 PYKVTQDEL True PC9_epitope_Rep5 1091.54989005471 1091.5487899358602 47.373 2 0.16166810161348238 0.0006531678641410843 0.0023106121646698143 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 7242 17385 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 71.675 2 0.1616656867320315 0.0006531678641410843 0.0023107408516457205 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 115652 22086 TRWPGFYIL True PC9_epitope_Rep1 1151.6127650947897 1151.6116699358602 89.765 2 0.16166546815027655 0.0006531678641410843 0.0023107525000346527 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF', 'ENST00000588721.1_1_17:75208810-75210102:+|nuORF'] 141623 12726 YTSDHFETI True PC9_epitope_Rep3 1111.4822044177101 1111.48110993586 53.971 2 0.16166349933313168 0.0006531678641410843 0.002310857422450243 ['ENSG00000136628|ENST00000366923|EPRS1'] 71085 22315 LYLEPQGTLF True PC9_epitope_Rep5 1179.6175756917098 1179.61646993586 90.842 2 0.1616576372394069 0.0006531678641410843 0.0023111698539643346 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 141847 5680 YVDGVEVHN True NCI_RA007_Epitope_Rep5 1030.47197408718 1030.47086993586 28.537 2 0.16164696876807458 0.0006531678641410843 0.00231173855886667 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 17703 7574 EHNDLQYAA True PC9_epitope_Rep5 1059.46213767947 1059.46104993586 34.082 2 0.16164226792673583 0.0006531678641410843 0.0023119891912944607 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 133880 14452 VYGSFASKL True PC9_epitope_Rep5 970.5123823471799 970.51128993586 60.59 2 0.16164187867219398 0.0006531678641410843 0.0023120099462028768 ['ENSG00000155096|ENST00000337198|AZIN1'] 104898 12897 SRDDNM[Oxidation]FQI True PC9_epitope_Rep3 1140.48697290876 1140.4858699358601 54.627 2 0.16164142362203887 0.0006531678641410843 0.002312034209545081 ['ENSG00000113387|ENST00000265073|SUB1'] 88897 11666 QVEEIFNLK True NCI_RA007_Epitope_Rep5 1118.5971746003 1118.5960699358602 51.526 2 0.16163754629212546 0.0006531678641410843 0.0023122409596730313 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 128477 6774 VPSLQGEKA True PC9_epitope_Rep1 927.5025459394699 927.50144993586 30.862 2 0.16162891103214216 0.0006531678641410843 0.002312701482379553 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 23825 17994 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.66355490379 74.517 3 0.16162299564291152 0.0006531678641410843 0.0023130170059094926 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 133749 12118 VYEDQVGKF True PC9_epitope_Rep5 1083.5236753068698 1083.52256993586 51.603 2 0.16162246711716138 0.0006531678641410843 0.0023130451992680544 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 8674 3996 AVAIKAMAK True NCI_RA007_Epitope_Rep4 901.5419086536499 901.54080993586 21.624 2 0.161622328786188 0.0006531678641410843 0.0023130525783686753 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 107375 13081 SVLKSIQEV True PC9_epitope_Rep2 1001.57571087973 1001.5746099358599 55.593 2 0.16162119728358323 0.0006531678641410843 0.0023131129379071634 ['ENSG00000039123|ENST00000230640|MTREX'] 115421 17837 TRLPIDVQL True PC9_epitope_Rep6 1053.61824439805 1053.6171499358602 81.239 2 0.16162097918895502 0.0006531678641410843 0.0023131245722557824 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 42263 18857 IDTIEIITDR True PC9_epitope_Rep1 1187.63976768827 1187.6386699358602 77.317 2 0.16161925297819435 0.0006531678641410843 0.002313216659749008 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 18915 10617 ELEEDFIK True NCI_RA007_Epitope_Rep1 1021.4967918526899 1021.49568993586 45.286 2 0.16161788156075674 0.0006531678641410843 0.0023132898228316414 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 140338 13834 YRDNYQAFC True PC9_epitope_Rep5 1178.48149322506 1178.48038993586 58.233 2 0.1616162416333763 0.0006531678641410843 0.002313377313555701 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 6365 4529 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 23.909 2 0.16161512070402329 0.0006531678641410843 0.002313437117447605 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 128547 5074 VPSYPSKSA True PC9_epitope_Rep5 934.47599683846 934.47488993586 24.542 2 0.16161486390462904 0.0006531678641410843 0.002313450818442151 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 49929 20068 KILDYEVTL True PC9_epitope_Rep1 1092.6066766548402 1092.60556993586 82.018 2 0.1616133920678541 0.0006531678641410843 0.0023135293467784414 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'IL6ST-ANKRD55|1|fusion', 'IL6ST-ANKRD55|2|fusion', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF', 'ENST00000506241.1_1_5:55251841-55256299:-|nuORF'] 77066 16966 NRLDSIDPAL True PC9_epitope_Rep1 1112.5825871653199 1112.5814899358602 70.082 2 0.16161150912811248 0.0006531678641410843 0.0023136298129728854 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124359502-124368686:-|nuORF', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 108923 11163 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 47.975 2 0.1616099806859512 0.0006531678641410843 0.0023137113677876645 ['ENSG00000183751|ENST00000568546|TBL3'] 75527 19333 NKTDVVLIL True PC9_epitope_Rep3 1013.6120963884499 1013.61098993586 79.585 2 0.16160119422573097 0.0006531678641410843 0.0023141802525814574 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3', 'DAPK3|p.E84K|1|0.14|ENSG00000167657|chr19:3964804-3964804|C/T|missense_variant'] 111435 20003 THSQFIVVSL True PC9_epitope_Rep3 1129.6131590176099 1129.61206993586 82.187 2 0.16160028184637773 0.0006531678641410843 0.0023142289466621725 ['ENSG00000136824|ENST00000374793|SMC2'] 48944 6796 KEEEPSVKLP True H1975_Epitope_Rep2 1154.6183039676998 1154.61720993586 31.056 2 0.16159551027407879 0.0006531678641410843 0.002314483624214472 ['ENSG00000254505|ENST00000347519|CHMP4A', 'nc|ENSG00000254505|Q9BY43-2|CHMP4A'] 92326 13993 RLMNDMTAV True PC9_epitope_Rep3 1049.49978614149 1049.49868993586 58.895 2 0.1615912173975592 0.0006531678641410843 0.002314712775819285 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 8095 10549 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.4561749679299 45.596 1 0.1615863170104235 0.0006531678641410843 0.002314974383740579 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 96307 14158 RYSEYAEEF True PC9_epitope_Rep1 1192.5036681382796 1192.50256993586 59.281 2 0.16158540206598504 0.0006531678641410843 0.002315023231462356 ['ENSG00000139505|ENST00000381801|MTMR6'] 91530 5508 RIFAPNHVVAK True NCI_RA007_Epitope_Rep4 1250.7247751552602 1250.72311490379 27.778 3 0.16158304510599894 0.0006531678641410843 0.0023151490713060378 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000600238.1_1_19:17972170-17973061:+|nuORF', 'ENST00000602216.1_1_19:17970765-17972392:+|nuORF'] 76692 19366 NQSGQVFGL True PC9_epitope_Rep1 948.4664947839199 948.46538993586 79.298 2 0.16158278221238992 0.0006531678641410843 0.002315163107814624 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 117465 7411 TVQTTEDQILK True NCI_RA007_Epitope_Rep3 1274.67179609254 1274.67068993586 36.275 2 0.1615788782335926 0.0006531678641410843 0.0023153715604373377 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'ENST00000478896.2_1_10:75757878-75863603:+|nuORF'] 96080 12566 RYLTVATVF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 56.668 2 0.16157833566354451 0.0006531678641410843 0.002315400532403807 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 133471 10655 VWAAVPGKTF True NCI_RA007_Epitope_Rep3 1074.58621599378 1074.5851099358601 48.96 2 0.1615697602183804 0.0006531678641410843 0.0023158584891374125 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 1782 7556 AEHFSIIRA True H1975_Epitope_Rep3 1042.55597849466 1042.55488993586 34.045 2 0.16156907771547274 0.0006531678641410843 0.0023158949409052745 ['ENSG00000181588|ENST00000402693|MEX3D', 'nc|ENSG00000181588|Q86XN8-2|MEX3D', 'nc|ENSG00000181588|Q86XN8-3|MEX3D', 'MEX3A|p.M202I|1|0.12|ENSG00000254726|chr1:156077531-156077531|C/T|missense_variant'] 1572 11511 AEEVAPPLP True H1975_Epitope_Rep2 921.4807478657299 921.4801949679301 49.335 1 0.16155066971166288 0.0006531678641410843 0.002316878309410008 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'RAB11FIP1|p.G778V|1|0.1|ENSG00000156675|chr8:37872469-37872469|C/A|missense_variant', 'ENST00000522774.1_1_8:37728794-37730726:-|nuORF', 'RAB11FIP1|p.P1155Hfs*22|1|0.09|ENSG00000156675|chr8:37871329-37871338|GTCTCCGAGG/-|frameshift_variant'] 120656 6955 VEILANDQGNR True PC9_epitope_Rep2 1227.6207635791898 1227.6196699358602 32.151 2 0.16154911598413058 0.0006531678641410843 0.0023169613297144595 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 73044 16555 MRDPIRILV True PC9_epitope_Rep2 1111.65358436095 1111.65248993586 68.917 2 0.16154504288247193 0.0006531678641410843 0.0023171789818133646 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 45381 3111 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 15.989 2 0.1615446185506119 0.0006531678641410843 0.0023172016577769346 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 14715 15269 DVLLQVDDER True PC9_epitope_Rep5 1200.59863115228 1200.5975299358602 63.742 2 0.16154362048836465 0.0006531678641410843 0.0023172549943187223 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 2923 5021 AEYNGRLAA True NCI_RA007_Epitope_Rep5 963.4773938207899 963.47628993586 26.016 2 0.1615424798766583 0.0006531678641410843 0.0023173159502189113 ['ENSG00000101413|ENST00000373433|RPRD1B'] 106255 15174 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.55917496793 63.522 1 0.16154032383435019 0.0006531678641410843 0.0023174311765399563 ['ENSG00000131459|ENST00000253778|GFPT2'] 118648 12632 TYSPALNKM[Oxidation]F True PC9_epitope_Rep2 1186.5692459807399 1186.5681499358602 53.899 2 0.16153887222989974 0.0006531678641410843 0.0023175087585015864 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 77519 10749 NTDFYQTSY True H1975_Epitope_Rep3 1137.46146897313 1137.4608749679298 46.425 1 0.1615254849999411 0.0006531678641410843 0.0023182243701903274 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 114731 20108 TQINVGNLEL True PC9_epitope_Rep4 1099.5873381925899 1099.58624993586 85.48 2 0.16152547296282924 0.0006531678641410843 0.002318225013731044 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'DDX17|p.S385C|1|0.27|ENSG00000100201|chr22:38494691-38494691|T/A|missense_variant'] 65310 11851 LRDAVPATL True PC9_epitope_Rep2 954.5498304850599 954.54872993586 50.913 2 0.16152537490032545 0.0006531678641410843 0.0023182302564582705 ['ENSG00000172922|ENST00000308418|RNASEH2C', 'ENST00000528220.1_1_11:65487749-65488268:-|nuORF'] 7251 17464 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.5233099358602 72.351 2 0.16152516610367498 0.0006531678641410843 0.0023182414194177162 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 87873 15160 QRIDEFEAL True PC9_epitope_Rep6 1119.5560380643099 1119.5549499358601 70.389 2 0.1615203306792518 0.0006531678641410843 0.002318499952220533 ['ENSG00000092820|ENST00000367075|EZR'] 70828 6531 LYDATYETK True NCI_RA007_Epitope_Rep1 1102.5182555732601 1102.51714993586 29.418 2 0.16151420468304384 0.0006531678641410843 0.0023188275286280006 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 89442 18658 QYEEQFVTL True PC9_epitope_Rep6 1155.5448046742697 1155.54370993586 84.411 2 0.1615140059274869 0.0006531678641410843 0.002318838157491081 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 14637 12531 DVDPETLSY True H1975_Epitope_Rep2 1037.45532096353 1037.4542299358602 53.294 2 0.1615114624749179 0.0006531678641410843 0.0023189741781563266 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 48501 8985 KAIEQADLL True NCI_RA007_Epitope_Rep4 999.5600608155898 999.55896993586 41.396 2 0.16151032151310404 0.0006531678641410843 0.002319035197958167 ['nc|ENSG00000182287|P56377|AP1S2', 'ENSG00000106367|ENST00000337619|AP1S1', 'ENSG00000182287|ENST00000672987|AP1S2', 'nc|ENSG00000182287|P56377-2|AP1S2'] 1678 6604 AEGDISNVA True H1975_Epitope_Rep2 874.40322582102 874.40267496793 30.313 1 0.1615074471963841 0.0006531678641410843 0.0023191889264590326 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 95090 19703 RVADILTQL True PC9_epitope_Rep2 1027.60259433391 1027.6014899358602 81.175 2 0.1615049641079723 0.0006531678641410843 0.0023193217388990466 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 104693 10070 SQTTVYEKL True PC9_epitope_Rep5 1067.54989005471 1067.5487899358602 43.715 2 0.16150428680324222 0.0006531678641410843 0.0023193579670769348 ['ENSG00000118193|ENST00000367350|KIF14'] 87729 14617 QRALLANAL True PC9_epitope_Rep5 968.5767139392399 968.57560993586 61.225 2 0.16149922970606118 0.0006531678641410843 0.002319628482711402 ['ENSG00000109133|ENST00000504986|TMEM33'] 105772 3804 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 20.813 2 0.16149771952632708 0.0006531678641410843 0.002319709271772835 ['ENSG00000115207|ENST00000264720|GTF3C2'] 142591 18932 YYLTDVDRI True PC9_epitope_Rep5 1156.5764391557198 1156.57534993586 77.845 2 0.1614968871918488 0.0006531678641410843 0.0023197537998076714 ['ENSG00000088256|ENST00000078429|GNA11'] 127174 10935 VLVDQTTGLSR True PC9_epitope_Rep5 1187.65100107831 1187.64990993586 47.051 2 0.1614920227576664 0.0006531678641410843 0.0023200140532453556 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 92867 16577 RPFGGLIRDV True PC9_epitope_Rep5 1128.64037682496 1128.63874490379 68.769 3 0.16149104379427612 0.0006531678641410843 0.002320066432561838 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 102709 9478 SMDEKVELY True H1975_Epitope_Rep2 1112.5059766374 1112.5048699358601 41.425 2 0.16148689436981026 0.0006531678641410843 0.002320288460126355 ['ENSG00000131143|ENST00000253452|COX4I1'] 47087 19453 ITTDVLYTI True PC9_epitope_Rep6 1037.5644774896898 1037.5633899358602 87.489 2 0.16148298121132681 0.0006531678641410843 0.002320497865008926 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 35717 8418 GTFLEGVAK True NCI_RA007_Epitope_Rep3 920.4967322830398 920.49562993586 40.203 2 0.1614810052906521 0.0006531678641410843 0.0023206036096416146 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 122061 17386 VFYPYPQYF True NCI_RA007_Epitope_Rep4 1222.5698972232997 1222.5688099358601 75.289 2 0.16147492835785593 0.0006531678641410843 0.0023209288568273177 ['ENSG00000103160|ENST00000219439|HSDL1'] 116242 19630 TTDFIFNLY True H1975_Epitope_Rep1 1132.54407639828 1132.54357496793 81.719 1 0.16147247283605257 0.0006531678641410843 0.002321060293208559 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 1509 13243 [Acetylation]-AEELVLER True H1975_Epitope_Rep3 999.5236756231699 999.52317496793 56.195 1 0.16146911741344225 0.0006531678641410843 0.0023212399104803987 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 70532 15488 LVYEGQLSQA True PC9_epitope_Rep1 1106.56078909158 1106.5596899358602 64.397 2 0.16146203580491325 0.0006531678641410843 0.002321619037727842 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 91000 13695 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54415490379 64.464 3 0.16146165605694948 0.0006531678641410843 0.0023216393699975768 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 109386 10698 [Acetylation]-TDAAVSFAK True NCI_RA007_Epitope_Rep1 950.47091177432 950.46980993586 45.603 2 0.1614561851622017 0.0006531678641410843 0.0023219323095660465 ['ENSG00000005022|ENST00000317881|SLC25A5'] 97682 15669 SEHWLVLVP True NCI_RA007_Epitope_Rep5 1078.5811306133398 1078.58002993586 66.987 2 0.1614534756296129 0.0006531678641410843 0.0023220774054124793 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 3940 13015 AHDDSVMYL True PC9_epitope_Rep6 1049.44879611445 1049.4476899358601 61.643 2 0.16145186092332223 0.0006531678641410843 0.002322163877465748 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 61398 12926 LITPAVVSER True PC9_epitope_Rep1 1083.62880908175 1083.6277099358601 54.592 2 0.1614468920665713 0.0006531678641410843 0.002322429993869674 ['ENSG00000118181|ENST00000527673|RPS25'] 26849 12160 FLDDGHTFNY True H1975_Epitope_Rep2 1227.51965255559 1227.5185499358602 51.858 2 0.1614382172203383 0.0006531678641410843 0.0023228946644855953 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 76982 19557 NRFNYPFEL True PC9_epitope_Rep4 1198.5771078620598 1198.5760099358602 83.349 2 0.16143046266007138 0.0006531678641410843 0.0023233101183381187 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 72980 18381 MQLEDLKQQL True PC9_epitope_Rep5 1244.64347316972 1244.6423699358602 75.721 2 0.16142915035399166 0.0006531678641410843 0.0023233804330357365 ['nc|ENSG00000269335|Q9Y6K9-2|IKBKG', 'ENSG00000269335|ENST00000594239|IKBKG'] 4460 13513 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 56.834 2 0.16142702647826535 0.0006531678641410843 0.0023234942369668174 ['ENSG00000181789|ENST00000314797|COPG1'] 32640 10595 GGNFGFGDSR True PC9_epitope_Rep1 1012.4362572847999 1012.43516993586 45.647 2 0.1614131571587955 0.0006531678641410843 0.002324237535582801 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 125218 16459 VIIKGLEEI True PC9_epitope_Rep6 1012.6168474157199 1012.61574993586 75.723 2 0.1614068154617566 0.0006531678641410843 0.0023245774853665646 ['ENSG00000138160|ENST00000260731|KIF11'] 128218 13869 VPNKFLVTA True PC9_epitope_Rep3 987.5753169569099 987.57420993586 58.429 2 0.16140659685514655 0.0006531678641410843 0.002324589204766801 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 32194 7149 GEWERAAAV True NCI_RA007_Epitope_Rep3 987.4773938207898 987.47628993586 35.238 2 0.1613970940992972 0.0006531678641410843 0.0023250987002062062 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS', 'ENST00000493227.1_1_7:7622738-7646720:+|nuORF'] 106223 6850 STEERTFQY True H1975_Epitope_Rep2 1159.51456717515 1159.51346993586 31.267 2 0.16139688379090988 0.0006531678641410843 0.002325109977266761 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT', 'nc|ENSG00000005469|Q9UKG9-2|CROT'] 45549 6341 IQRTPKIQVY True NCI_RA007_Epitope_Rep3 1244.7241064489199 1244.72245490379 31.948 3 0.1613913323881201 0.0006531678641410843 0.0023254076718156476 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 54083 19271 KVLDILQHI True PC9_epitope_Rep2 1077.65462990677 1077.6535299358602 79.499 2 0.16139098324801218 0.0006531678641410843 0.002325426395762619 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 86231 13638 QILEKDAVIKV True PC9_epitope_Rep5 1254.75473787086 1254.7531049037902 57.481 3 0.16138373866430453 0.0006531678641410843 0.0023258149477048415 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 86185 20146 QIFNGTFVKL True PC9_epitope_Rep2 1165.64954452633 1165.64844993586 82.904 2 0.1613830632036644 0.0006531678641410843 0.002325851178287355 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 140215 16635 YQVGVHYEL True PC9_epitope_Rep3 1106.5396597241802 1106.53856993586 69.122 2 0.16135962938712314 0.0006531678641410843 0.0023271084782664794 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 14521 7915 DTLYEAVR True NCI_RA007_Epitope_Rep5 965.4818104948899 965.48070993586 37.137 2 0.1613524690201662 0.0006531678641410843 0.0023274927904975676 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF', 'ENST00000490335.4_1_6:35436211-35436651:+|nuORF'] 77639 8624 NTFSVVPSPK True H1975_Epitope_Rep3 1074.5709598524597 1074.5698699358602 38.165 2 0.16134992277051016 0.0006531678641410843 0.0023276294684510383 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 7182 11680 AQYEHDLEV True PC9_epitope_Rep1 1102.4931034545798 1102.49200993586 49.804 2 0.1613483730022391 0.0006531678641410843 0.0023277126610591085 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 73356 13946 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep1 1136.5423625265598 1136.54126993586 58.799 2 0.16134801641835542 0.0006531678641410843 0.0023277318031432867 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 75097 12637 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 53.479 2 0.1613340477870616 0.0006531678641410843 0.002328481788923336 ['ENSG00000171223|ENST00000302754|JUNB'] 134114 18249 VYKVVGNLL True PC9_epitope_Rep5 1003.6066170851898 1003.60552993586 75.21 2 0.16133204378055024 0.0006531678641410843 0.0023285894052601053 ['ENSG00000183856|ENST00000361170|IQGAP3'] 126007 19885 VLDSEGYLLFY True H1975_Epitope_Rep2 1317.6492697428098 1317.64816993586 82.471 2 0.16133028133287278 0.0006531678641410843 0.002328684053850609 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 101314 22966 SLINVGLISV True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 93.138 2 0.16132854968729174 0.0006531678641410843 0.0023287770520213765 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 76506 15751 NQIKEFIYA True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 65.853 2 0.16132822798643084 0.0006531678641410843 0.002328794329401656 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 1476 13527 AEEIPLKILA True H1975_Epitope_Rep2 1095.6539612004299 1095.65286993586 57.168 2 0.16132605977685022 0.0006531678641410843 0.0023289107793724806 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'IGF2BP2|p.A393Lfs*38|1|0.5|ENSG00000073792|chr3:185672565-185672565|G/-|frameshift_variant', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 98932 14980 SHAENILQI True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 62.877 2 0.16132062084041032 0.0006531678641410843 0.0023292029187930406 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 140167 15704 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51748993586 65.68 2 0.16131607970679038 0.0006531678641410843 0.0023294468629307626 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 35498 5340 GSNGYILNK True NCI_RA007_Epitope_Rep5 964.4977949122 964.49668993586 27.232 2 0.16131583848222322 0.0006531678641410843 0.0023294598219329842 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1', 'EHMT1|p.Y479Qfs*86|1|0.08|ENSG00000181090|chr9:137757939-137757940|-/CAGGG|frameshift_variant', 'nc|ENSG00000181090|Q9H9B1-4|EHMT1', 'ENST00000371394.6_1_9:140611085-140686569:+|nuORF'] 68850 14792 LTMEVIRQV True PC9_epitope_Rep6 1087.60596546219 1087.60486993586 68.866 2 0.16131310297151483 0.0006531678641410843 0.0023296067833527083 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 22413 4859 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56272993586 23.816 2 0.16131135221752563 0.0006531678641410843 0.002329700844979729 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 45424 18781 IQHDLIFSL True PC9_epitope_Rep6 1084.5916952970401 1084.5905899358602 84.881 2 0.16130835558434387 0.0006531678641410843 0.002329861851956359 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 115697 8753 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.58478993586 38.049 2 0.16130538592003185 0.0006531678641410843 0.0023300214208804943 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 97515 4941 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39670993586 24.133 2 0.16130118478293204 0.0006531678641410843 0.002330247179158274 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 76714 16774 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53911496793 69.667 1 0.1612916170805499 0.0006531678641410843 0.0023307614043693472 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 139422 22209 YLPELLQTV True PC9_epitope_Rep5 1074.5961119711399 1074.5950099358602 90.438 2 0.1612900058547204 0.0006531678641410843 0.0023308480123762428 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 132496 11992 VVDLLAPYAK True H1975_Epitope_Rep1 1087.62774645259 1087.62664993586 51.135 2 0.16128482907458624 0.0006531678641410843 0.0023311263009057693 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 93425 9857 RQFLESSEL True NCI_RA007_Epitope_Rep4 1107.5560380643099 1107.5549499358601 44.76 2 0.16128167137922342 0.0006531678641410843 0.002331296065651647 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 156 10899 AADPSVVNL True H1975_Epitope_Rep2 884.46034677432 884.4597949679301 46.953 1 0.16127156531343692 0.0006531678641410843 0.002331839473305814 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 95924 8441 RYLEKPMEI True NCI_RA007_Epitope_Rep4 1177.6165301458898 1177.6154299358602 39.284 2 0.1612712335309446 0.0006531678641410843 0.0023318573155430337 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 117489 13288 TVRETVNVI True PC9_epitope_Rep5 1029.5818588893299 1029.5807699358602 56.123 2 0.16127074941808542 0.0006531678641410843 0.0023318833498813464 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101'] 115414 19379 TRLPEFSEL True PC9_epitope_Rep5 1090.56587447202 1090.56476993586 79.589 2 0.16126833411901254 0.0006531678641410843 0.0023320132427607928 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 126634 15078 VLNEYFHNV True PC9_epitope_Rep4 1133.5505587610498 1133.54946993586 65.929 2 0.1612650106917824 0.0006531678641410843 0.002332191985871213 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 96002 18804 RYLNEFEEL True PC9_epitope_Rep2 1211.5822528121498 1211.5811499358601 77.702 2 0.16126329688351898 0.0006531678641410843 0.0023322841645688932 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 95144 6132 RVFSWSQAK True NCI_RA007_Epitope_Rep3 1107.58252759567 1107.5814299358601 31.109 2 0.16125785471900286 0.0006531678641410843 0.0023325769003430617 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 45624 12859 IRDEYVETL True PC9_epitope_Rep4 1136.5713537752802 1136.5702499358601 57.33 2 0.1612577914846956 0.0006531678641410843 0.002332580301952423 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52', 'VPS52|p.T346Hfs*13|1|0.09|ENSG00000223501|chr6:33267278-33267279|-/A|frameshift_variant', 'ENST00000495755.1_1_6:33235423-33235928:-|nuORF'] 64791 18383 LQAPPLTSL True PC9_epitope_Rep6 938.5436824754601 938.54258993586 83.354 2 0.1612570746206034 0.0006531678641410843 0.002332618865093601 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 54682 20785 KYLTAEAFGF True PC9_epitope_Rep1 1145.5757108797297 1145.57460993586 84.779 2 0.1612501099945213 0.0006531678641410843 0.0023329935548383083 ['ENSG00000075618|ENST00000382361|FSCN1'] 14330 4919 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 23.214 2 0.16124071148316166 0.0006531678641410843 0.002333499280425889 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 14276 5365 DSTANEVEAVK True H1975_Epitope_Rep3 1161.5513466066898 1161.5502499358602 25.701 2 0.16123639523667121 0.0006531678641410843 0.002333731570525978 ['ENSG00000185624|ENST00000331483|P4HB'] 34702 8303 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 36.91 2 0.16123636904187794 0.0006531678641410843 0.0023337329803378415 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 24609 16968 FAIPLIEKL True H1975_Epitope_Rep2 1042.64266824074 1042.6415699358602 70.514 2 0.1612351191315293 0.0006531678641410843 0.002333800251887582 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 130084 10243 VSDKTLSFY True H1975_Epitope_Rep2 1058.52842633414 1058.52732993586 44.405 2 0.16123325427114413 0.0006531678641410843 0.00233390062432569 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 28457 14126 FSDLYNEVY True H1975_Epitope_Rep2 1148.50260550912 1148.5015099358602 59.49 2 0.16123319075035997 0.0006531678641410843 0.002333904043282758 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 28922 5230 FTDKSAEDY True H1975_Epitope_Rep2 1074.4505699362599 1074.4494699358602 25.185 2 0.16122103291462717 0.0006531678641410843 0.0023345585215126257 ['ENST00000533568.5_1_11:77069900-77103583:-|nuORF', 'ENSG00000149269|ENST00000356341|PAK1', 'nc|ENSG00000149269|Q13153-2|PAK1'] 54661 12908 KYLSGIAHF True PC9_epitope_Rep2 1034.5549158654999 1034.55380993586 54.947 2 0.1612206765199581 0.0006531678641410843 0.002334577709646172 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 107775 6201 SVSTVLTSKYR True NCI_RA007_Epitope_Rep3 1239.68230120659 1239.6806549037901 31.399 3 0.16121849046302456 0.0006531678641410843 0.0023346954094448477 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 109787 5978 TEEAAVAIKA True H1975_Epitope_Rep1 1001.5393253710098 1001.53822993586 28.065 2 0.16121760711575955 0.0006531678641410843 0.0023347429715506224 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 108667 19952 SYQKVIELF True PC9_epitope_Rep2 1125.6070110080097 1125.60647496793 82.145 1 0.1612172363794744 0.0006531678641410843 0.0023347629334091336 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 48278 10956 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 47.461 3 0.1612020858023968 0.0006531678641410843 0.00233557884424248 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 9920 19947 AYLPKILQI True PC9_epitope_Rep4 1057.65356727761 1057.6524699358602 84.861 2 0.16118859890133716 0.0006531678641410843 0.002336305400001958 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 72071 5361 MEVEAPSKPA True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 25.665 2 0.16118490936357957 0.0006531678641410843 0.002336504199213668 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 21170 12135 ERDAYVQAL True PC9_epitope_Rep5 1063.52982331647 1063.5287299358602 51.667 2 0.1611808931035804 0.0006531678641410843 0.0023367206220405914 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 48057 23223 IYLTFPVAM True PC9_epitope_Rep5 1053.55689001145 1053.55578993586 94.31 2 0.16117760600135544 0.0006531678641410843 0.002336897767893501 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 53040 9417 KPLQPLPNTA True PC9_epitope_Rep5 1077.61824439805 1077.6171499358602 41.177 2 0.1611717560922966 0.0006531678641410843 0.0023372130596386945 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'ENST00000436442.2_2_6:30314274-30314587:+|nuORF'] 4207 5869 AIAQAESLRYK True NCI_RA007_Epitope_Rep4 1248.6826355597598 1248.68098490379 29.196 3 0.16116254526790094 0.0006531678641410843 0.002337709580302186 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 23945 18780 EYLLKVNEI True PC9_epitope_Rep2 1119.61757569171 1119.61646993586 77.607 2 0.16116218487974537 0.0006531678641410843 0.002337729009604724 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 99098 10983 SHHENLVSF True PC9_epitope_Rep1 1068.49885754136 1068.49776993586 47.136 2 0.16115624996754824 0.0006531678641410843 0.0023380489967199823 ['ENSG00000128791|ENST00000262120|TWSG1'] 141835 5796 YVDGVEVH True NCI_RA007_Epitope_Rep5 916.42904664604 916.4279499358599 28.981 2 0.16115435622495156 0.0006531678641410843 0.0023381511090772014 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 72222 20927 MHDFNLISI True PC9_epitope_Rep5 1088.53246616876 1088.53136993586 85.553 2 0.16115048857717132 0.0006531678641410843 0.002338359670072516 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 9741 12882 AYHELAQVY True PC9_epitope_Rep1 1092.5240096600398 1092.52290993586 54.424 2 0.16114733458838387 0.0006531678641410843 0.0023385297611150696 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3'] 70971 16977 LYGRNFNYL True PC9_epitope_Rep2 1158.5821932425 1158.58108993586 70.549 2 0.16114259379622217 0.0006531678641410843 0.002338785449915743 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 89400 23332 QYAPLLAVF True PC9_epitope_Rep5 1020.5644179200399 1020.56387496793 94.728 1 0.16114118031695204 0.0006531678641410843 0.0023388616895876476 ['ENSG00000136261|ENST00000258761|BZW2'] 106402 3277 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 17.408 3 0.16114075295623162 0.0006531678641410843 0.0023388847408857046 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 29493 21842 FVFPGELLL True H1975_Epitope_Rep2 1033.5848190114498 1033.5837299358602 90.323 2 0.16113298845145782 0.0006531678641410843 0.0023393035879956557 ['ENSG00000105281|ENST00000542575|SLC1A5'] 29459 14441 FVEPSRQFV True PC9_epitope_Rep1 1107.5712942056298 1107.57018993586 60.371 2 0.16113038754456674 0.0006531678641410843 0.0023394439076212035 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 64759 10424 LQAEIDNIK True PC9_epitope_Rep1 1042.56587447202 1042.56476993586 44.982 2 0.16112436717851927 0.0006531678641410843 0.0023397687402416357 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 54684 20700 KYLTAEAFGF True PC9_epitope_Rep3 1145.5757108797297 1145.57460993586 84.896 2 0.1611191520931968 0.0006531678641410843 0.002340050159852583 ['ENSG00000075618|ENST00000382361|FSCN1'] 71079 22132 LYLENIDEF True PC9_epitope_Rep5 1154.54955570154 1154.5484499358602 90.165 2 0.16111175316884338 0.0006531678641410843 0.0023404494831289206 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF', 'ENST00000527458.5_1_11:74303652-74303820:+|nuORF'] 2927 5076 AEYQRNIVS True H1975_Epitope_Rep2 1078.5407223533398 1078.5396299358601 24.607 2 0.16110729910347232 0.0006531678641410843 0.002340689903861619 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2', 'ENST00000491694.1_1_3:111658417-111664240:+|nuORF'] 12032 12197 DHSNLIRSL True PC9_epitope_Rep3 1053.5567067706502 1053.55560993586 51.948 2 0.16110640462467932 0.0006531678641410843 0.002340738188850137 ['ENSG00000125124|ENST00000245157|BBS2'] 40986 11403 HTDVGLLEY True H1975_Epitope_Rep2 1045.50802524273 1045.5069299358602 48.911 2 0.16110465065023025 0.0006531678641410843 0.002340832873285724 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 133734 10437 VYDTNPAKF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 45.465 2 0.1610998675377624 0.0006531678641410843 0.0023410910984872704 ['ENSG00000139433|ENST00000318348|GLTP'] 100218 13043 SIWDETLYK True NCI_RA007_Epitope_Rep4 1153.5655401188499 1153.56444993586 57.272 2 0.1610997532175416 0.0006531678641410843 0.0023410972706246567 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000474757.1_1_X:55757854-55777647:+|nuORF'] 39123 12432 HHYEGAVVIL True PC9_epitope_Rep4 1136.5978433066398 1136.59674993586 55.624 2 0.16109941292919921 0.0006531678641410843 0.002341115642854728 ['ENSG00000163655|ENST00000496455|GMPS'] 114561 19869 TQDAVPLTL True PC9_epitope_Rep2 956.51786165044 956.51676993586 81.82 2 0.16109910606574088 0.0006531678641410843 0.0023411322105926693 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 2412 9919 AEQFKLIQA True H1975_Epitope_Rep1 1046.5760452329 1046.57494993586 43.089 2 0.16109891736205467 0.0006531678641410843 0.0023411423988734205 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 7305 17977 ARIPLNPVL True PC9_epitope_Rep5 991.61785047523 991.61674993586 74.166 2 0.16109063273023527 0.0006531678641410843 0.0023415897372102814 ['ENSG00000185338|ENST00000332029|SOCS1'] 116887 20228 TVFDEAIRAV True PC9_epitope_Rep5 1119.59242357303 1119.5913299358601 82.854 2 0.16108119642578242 0.0006531678641410843 0.0023420993654608905 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 105295 12719 SRMDGEGQLTL True PC9_epitope_Rep4 1205.5710365054497 1205.56992993586 56.777 2 0.16107642348803577 0.0006531678641410843 0.0023423571805885677 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 130935 9353 VTDHLGVVY True H1975_Epitope_Rep2 1001.51819600361 1001.51708993586 40.937 2 0.16107005194924137 0.0006531678641410843 0.002342701389971934 ['nc|ENSG00000148719|Q9NXW2-2|DNAJB12', 'ENSG00000148719|ENST00000444643|DNAJB12', 'ENST00000473051.1_1_10:74095570-74096546:-|nuORF'] 142679 15200 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 63.611 2 0.161062109149119 0.0006531678641410843 0.0023431305542940006 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 74238 7113 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 32.292 2 0.1610603246691741 0.0006531678641410843 0.002343226983880591 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 29663 22151 FVLDKVPFL True PC9_epitope_Rep1 1076.6270181766 1076.62592993586 90.019 2 0.16105661075301772 0.0006531678641410843 0.00234342768889936 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 99034 9787 SHEEVVQTL True PC9_epitope_Rep1 1040.5138388991597 1040.51274993586 42.507 2 0.16105536991233518 0.0006531678641410843 0.002343494749423832 ['ENSG00000198218|ENST00000395443|QRICH1'] 4376 11786 AIMDPLPLR True NCI_RA007_Epitope_Rep3 1024.57393705792 1024.57282993586 53.477 2 0.1610527629352061 0.0006531678641410843 0.002343635648254955 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 103939 17407 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51234993586 72.215 2 0.16104857890859872 0.0006531678641410843 0.002343861799288313 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 32755 10028 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.46030993586 43.441 2 0.16104444919245225 0.0006531678641410843 0.0023440850361595793 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 116266 12009 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.49807496793 51.272 1 0.16103937259669518 0.0006531678641410843 0.0023443594868699327 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 47891 8527 IYIKHPHLF True NCI_RA007_Epitope_Rep1 1166.66004964038 1166.6584049037901 37.17 3 0.16103721043885802 0.0006531678641410843 0.0023444763871037838 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 35648 11493 GTDMEPSLY True H1975_Epitope_Rep3 1011.42191266027 1011.4213749679301 49.331 1 0.161031544480484 0.0006531678641410843 0.002344782753073087 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 65572 13564 LRSDSYVEL True PC9_epitope_Rep2 1080.54513902744 1080.5440499358601 57.465 2 0.1610312764835861 0.0006531678641410843 0.0023447972450152603 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 11052 16551 DAVEDLESVGK True PC9_epitope_Rep3 1160.55609763396 1160.5550099358602 68.803 2 0.16102952196178258 0.0006531678641410843 0.0023448921230568797 ['ENSG00000161634|ENST00000293371|DCD', 'nc|ENSG00000161634|P81605-2|DCD'] 93120 12405 RPNSLVGITSA True PC9_epitope_Rep5 1113.61422164677 1113.6131299358601 52.715 2 0.16102136522121543 0.0006531678641410843 0.0023453332597360398 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 109922 5046 TEFTPTEKDE True NCI_RA007_Epitope_Rep3 1195.52446315251 1195.52336993586 26.842 2 0.1610177548204647 0.0006531678641410843 0.002345528545592628 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M'] 48168 12663 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62676490379 53.712 3 0.16101236958155607 0.0006531678641410843 0.0023458198622729963 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 65794 9570 LSDIGSGIRY True H1975_Epitope_Rep2 1079.56112344475 1079.56002993586 41.785 2 0.16100883904800564 0.0006531678641410843 0.0023460108675288573 ['ENSG00000213341|ENST00000370397|CHUK'] 96717 21233 SALPDIKVLTL True PC9_epitope_Rep5 1168.7067250492798 1168.70562993586 86.723 2 0.16100722776792664 0.0006531678641410843 0.0023460980444912636 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 87762 10702 QRDEKVLEL True PC9_epitope_Rep3 1128.6138872935999 1128.61225490379 46.117 3 0.1610068154286632 0.0006531678641410843 0.002346120354282572 ['ENSG00000135968|ENST00000309863|GCC2'] 109655 16249 TEAPPIIFATP True H1975_Epitope_Rep2 1155.6175756917098 1155.61646993586 67.711 2 0.16100456686588846 0.0006531678641410843 0.0023462420174569392 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 73261 6846 MSEIEAKVRY True H1975_Epitope_Rep2 1224.6172584218798 1224.6156149037902 31.25 3 0.16099928465816493 0.0006531678641410843 0.0023465278471038117 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'TLN1|p.V299L|1|0.34|ENSG00000137076|chr9:35722172-35722172|C/A|missense_variant'] 96200 12509 RYPSNLQLF True NCI_RA007_Epitope_Rep3 1136.59784330664 1136.59674993586 56.434 2 0.16098603046507404 0.0006531678641410843 0.0023472452081862083 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 24202 17373 EYRPEFSNF True PC9_epitope_Rep1 1187.5247379360299 1187.52364993586 71.633 2 0.1609798322428311 0.0006531678641410843 0.002347580751789532 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 38421 6962 HENKFYINP True H1975_Epitope_Rep2 1160.5614577979197 1160.56036993586 31.699 2 0.16097760421928503 0.0006531678641410843 0.0023477013785721144 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 90563 8847 REMEENFAV True NCI_RA007_Epitope_Rep4 1123.49680893603 1123.49570993586 40.842 2 0.1609732636147154 0.0006531678641410843 0.002347936399776816 ['ENSG00000026025|ENST00000544301|VIM'] 109790 9355 TEEAFNTQV True H1975_Epitope_Rep2 1037.4665543535698 1037.46544993586 40.945 2 0.1609714903297463 0.0006531678641410843 0.0023480324207137905 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 45178 10470 IPQLNSKAV True PC9_epitope_Rep1 968.5654805492 968.56438993586 45.162 2 0.16097097560345397 0.0006531678641410843 0.002348060293167576 ['ENSG00000157456|ENST00000288207|CCNB2'] 107557 11627 SVPEFPLSPPK True NCI_RA007_Epitope_Rep5 1196.6441247927198 1196.64302993586 51.374 2 0.16096900008368611 0.0006531678641410843 0.0023481672707274344 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 142151 10997 YVSGELEHV True PC9_epitope_Rep1 1031.4923751785898 1031.4912699358601 47.188 2 0.16096855809027666 0.0006531678641410843 0.002348191206044992 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 125922 20447 VLDDKLVFV True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 83.459 2 0.16096814274816237 0.0006531678641410843 0.002348213698334143 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 53184 19559 KQDLVELYL True PC9_epitope_Rep4 1119.6175756917098 1119.61646993586 83.356 2 0.1609639031530593 0.0006531678641410843 0.002348443300169228 ['ENSG00000160445|ENST00000291900|ZER1'] 121644 11695 VFIDKQTNL True PC9_epitope_Rep4 1076.5866099166 1076.58550993586 52.747 2 0.16096332245025063 0.0006531678641410843 0.002348474750774699 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 86040 9825 QHQSGIVQL True PC9_epitope_Rep2 1008.5352430500798 1008.53414993586 43.127 2 0.1609618468389731 0.0006531678641410843 0.002348554671117054 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 47419 22292 IVLPEDLQL True PC9_epitope_Rep1 1038.5961119711399 1038.5950099358602 90.557 2 0.16096071869031015 0.0006531678641410843 0.0023486157744256673 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 77277 12539 NSDELQELY True H1975_Epitope_Rep3 1109.48768372097 1109.4865899358601 53.43 2 0.16095826309010222 0.0006531678641410843 0.002348748781267502 ['nc|ENSG00000160209|O00764-2|PDXK', 'PDXK|p.E67A|1|0.21|ENSG00000160209|chr21:43741724-43741724|A/C|missense_variant', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 2156 8443 AELQRLVAA True H1975_Epitope_Rep3 969.5607295219298 969.55962993586 37.461 2 0.16095487618086152 0.0006531678641410843 0.0023489322445263026 ['ENSG00000150779|ENST00000504148|TIMM8B'] 78296 19662 NYINDLRNF True PC9_epitope_Rep3 1167.56727145435 1167.5661699358602 80.866 2 0.16094254753719842 0.0006531678641410843 0.0023496001876075544 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 73371 14997 MTELPAPLSY True H1975_Epitope_Rep3 1120.5474475265598 1120.5468749679299 63.076 1 0.16093978222254895 0.0006531678641410843 0.002349750033281224 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 117967 12314 TYAPAIHQI True PC9_epitope_Rep5 1012.5341804209202 1012.53308993586 52.357 2 0.16093664524173804 0.0006531678641410843 0.002349920030196021 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 89639 22461 QYSPLLAAF True PC9_epitope_Rep5 1008.5280324113198 1008.5274749679301 91.399 1 0.1609366320082669 0.0006531678641410843 0.0023499207473603985 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 47697 17910 IYAPKLQEF True PC9_epitope_Rep1 1107.59644632431 1107.5953499358602 73.682 2 0.16093643943342442 0.0006531678641410843 0.0023499311836354254 ['ENSG00000175305|ENST00000308108|CCNE2'] 107430 14838 SVLQQNPSL True PC9_epitope_Rep5 984.52400966004 984.52290993586 62.076 2 0.16093520705479042 0.0006531678641410843 0.002349997971452985 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 106403 3369 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 17.765 3 0.16093368355516569 0.0006531678641410843 0.0023500805389707223 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 138493 13888 YHSEVPVSL True PC9_epitope_Rep2 1029.51311062317 1029.51257496793 58.701 1 0.16092144985141438 0.0006531678641410843 0.00235074366129855 ['ENSG00000115306|ENST00000356805|SPTBN1'] 8993 9118 AVGLVLPAK True NCI_RA007_Epitope_Rep4 866.5589386167799 866.5583949679301 41.913 1 0.16091914189983123 0.0006531678641410843 0.0023508687837144504 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 26714 8799 FIVNTNVPR True H1975_Epitope_Rep1 1058.58727862294 1058.5861899358601 38.771 2 0.16091834366665528 0.0006531678641410843 0.0023509120603747353 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 86067 21479 QHSIPVFIF True PC9_epitope_Rep1 1086.58621599378 1086.5851099358601 87.46 2 0.16091763674077217 0.0006531678641410843 0.0023509503874232385 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 40760 15811 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.5589899358602 68.741 2 0.16091505974066816 0.0006531678641410843 0.0023510901086388693 ['ENSG00000169813|ENST00000682386|HNRNPF'] 27816 20445 FQDEINWRL True PC9_epitope_Rep1 1219.5985715826298 1219.59746993586 83.451 2 0.1609150578901995 0.0006531678641410843 0.00235109020897158 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF'] 74872 10237 NHHLFTTTI True PC9_epitope_Rep6 1082.5508931142201 1082.5497899358602 50.035 2 0.16090375028708445 0.0006531678641410843 0.002351703388922458 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 40160 14671 HQDPQSIFV True PC9_epitope_Rep3 1069.51925863277 1069.5181699358602 61.568 2 0.16089364061052322 0.0006531678641410843 0.0023522517438861906 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 8059 11534 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.4858499358602 49.349 2 0.16089176187382492 0.0006531678641410843 0.002352353661770791 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 7002 15460 AQLQDFVRA True PC9_epitope_Rep1 1046.55089311422 1046.5497899358602 64.288 2 0.16088474765643465 0.0006531678641410843 0.0023527342086689827 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 28819 20805 FSWEGAFQHV True PC9_epitope_Rep1 1206.54580773378 1206.54470993586 84.852 2 0.16087853519176093 0.0006531678641410843 0.002353071308904348 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 138792 20230 YIVDLLTHL True PC9_epitope_Rep6 1085.61209638845 1085.61098993586 90.498 2 0.16087686318990385 0.0006531678641410843 0.002353162043167402 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 31860 7806 GELERALSA True H1975_Epitope_Rep1 944.4927095317598 944.49160993586 34.98 2 0.16086937465382656 0.0006531678641410843 0.0023535684652603475 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'GOLGA2|p.R293Tfs*17|1|0.13|ENSG00000167110|chr9:128263064-128263067|TCTC/-|frameshift_variant', 'ENSG00000186399|ENST00000327271|GOLGA8R', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'ENSG00000261739|ENST00000562295|GOLGA8S', 'ENSG00000178115|ENST00000562783|GOLGA8Q'] 54827 17167 KYPENFFLL True NCI_RA007_Epitope_Rep2 1169.61209638845 1169.61098993586 71.515 2 0.16086893360751825 0.0006531678641410843 0.0023535924041628224 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 111334 5238 THNPTNATL True PC9_epitope_Rep3 967.47230844035 967.47120993586 25.228 2 0.16086152441439466 0.0006531678641410843 0.0023539945931976155 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 75554 12002 NLAENISRV True PC9_epitope_Rep2 1014.54580773378 1014.5447099358599 51.483 2 0.16086001183067536 0.0006531678641410843 0.002354076708360348 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 110512 19596 TFITSGMRF True PC9_epitope_Rep3 1058.5219014850597 1058.5208099358601 80.613 2 0.1608572704544807 0.0006531678641410843 0.0023542255395151202 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 54841 16759 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 72.646 2 0.16085493019904226 0.0006531678641410843 0.0023543526009909017 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 114822 21555 TQLNMFQTL True PC9_epitope_Rep3 1094.54303085246 1094.54192993586 88.205 2 0.1608540326106016 0.0006531678641410843 0.002354401336339671 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 99596 7370 SIFDGRVVAK True NCI_RA007_Epitope_Rep3 1090.61349337078 1090.6123899358602 36.117 2 0.1608429109219967 0.0006531678641410843 0.0023550052817411546 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 140054 17140 YQHGIFQSI True PC9_epitope_Rep1 1091.53999407735 1091.5388899358602 70.752 2 0.16084290743204696 0.0006531678641410843 0.002355005471281547 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1'] 47978 12235 IYKDYQYYF True NCI_RA007_Epitope_Rep3 1301.59684024713 1301.59574993586 55.272 2 0.1608400548398012 0.0006531678641410843 0.00235516040165816 ['ENSG00000260314|ENST00000569591|MRC1'] 17548 17758 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 76.328 2 0.16083875840654172 0.0006531678641410843 0.002355230817081768 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 49925 19189 KILDLETQL True PC9_epitope_Rep2 1071.61757569171 1071.61646993586 79.183 2 0.16083819499038166 0.0006531678641410843 0.002355261419534391 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 89548 16504 QYLRVETQF True PC9_epitope_Rep5 1182.6033226099 1182.6022299358601 68.481 2 0.16082902772497648 0.0006531678641410843 0.002355759403560719 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant'] 130961 8934 VTDLAGNEY True H1975_Epitope_Rep2 980.4450906330001 980.44454496793 39.324 1 0.16082774284352866 0.0006531678641410843 0.00235582920927016 ['ENSG00000197081|ENST00000356956|IGF2R'] 96252 13278 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.6020249037902 58.97 3 0.1608276293647011 0.0006531678641410843 0.002355835374506382 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 19434 10476 ELNEFLTR True NCI_RA007_Epitope_Rep1 1020.52400966004 1020.52290993586 44.732 2 0.16082128776970106 0.0006531678641410843 0.002356179935151345 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 62618 21568 LLLDVPTAAV True PC9_epitope_Rep2 1010.6011973515799 1010.60010993586 88.433 2 0.16080730033759638 0.0006531678641410843 0.0023569400983572335 ['ENSG00000216490|ENST00000407280|IFI30'] 135409 16679 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.55560993586 68.985 2 0.1607997069634271 0.0006531678641410843 0.002357352871656051 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 115011 19349 TRALMVVSL True PC9_epitope_Rep3 988.5739370579199 988.57282993586 79.647 2 0.1607990947543925 0.0006531678641410843 0.0023573861542810944 ['nc|ENSG00000181885|O95471-2|CLDN7', 'ENSG00000181885|ENST00000360325|CLDN7'] 35256 7666 GRDENSVEL True PC9_epitope_Rep3 1017.4727023631699 1017.47160993586 34.486 2 0.1607949299641787 0.0006531678641410843 0.002357612584748033 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 7535 15466 ASDYFDQLY True H1975_Epitope_Rep2 1120.47130538084 1120.4707749679299 64.647 1 0.16078991905499138 0.0006531678641410843 0.002357885045630711 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 106571 11601 STMYPGLPSRL True NCI_RA007_Epitope_Rep3 1220.6223438023198 1220.62124993586 52.757 2 0.16078735634730476 0.0006531678641410843 0.0023580244012803907 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 71260 22020 LYPQFMFHL True PC9_epitope_Rep3 1194.5895871220598 1194.58848993586 89.999 2 0.16078732321216882 0.0006531678641410843 0.002358026203166136 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 77340 11183 NSDVVEQIY True H1975_Epitope_Rep3 1065.49785448185 1065.49727496793 48.113 1 0.16078555080795792 0.0006531678641410843 0.002358122588353774 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 7867 13085 ATADYICKV True PC9_epitope_Rep1 982.4793679667399 982.47826993586 55.2 2 0.16077969467894263 0.0006531678641410843 0.002358441078732142 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 35152 8801 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 40.52 2 0.1607788196686907 0.0006531678641410843 0.002358488670571465 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 40173 5461 HQEGEIFDTEK True NCI_RA007_Epitope_Rep5 1331.5993594282697 1331.5982699358601 27.693 2 0.16077264994473292 0.0006531678641410843 0.0023588242693090627 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 78431 20237 NYLSIFRKF True PC9_epitope_Rep1 1186.6498788795 1186.6482449037899 82.668 3 0.1607710550398009 0.0006531678641410843 0.0023589110310429902 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 40176 14267 HQELFPHSL True PC9_epitope_Rep1 1106.55089311422 1106.5497899358602 59.701 2 0.16077065773284246 0.0006531678641410843 0.002358932644764818 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 73201 19621 MRYVASYLL True PC9_epitope_Rep2 1114.5845017416198 1114.5834099358601 80.857 2 0.16076098599590694 0.0006531678641410843 0.0023594588537093246 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 90402 2764 REIEDPEDRKP True H1975_Epitope_Rep3 1382.6790067312995 1382.67736490379 14.716 3 0.16076048692515513 0.0006531678641410843 0.002359486009768127 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 73350 6341 M[Oxidation]TEGSTVNTEY True H1975_Epitope_Rep2 1246.50234818938 1246.5012499358602 29.32 2 0.16075439039886233 0.0006531678641410843 0.002359817766743515 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 54842 16558 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 70.451 2 0.1607526096406881 0.0006531678641410843 0.0023599146797258375 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 140342 13269 YRDPNTIETL True PC9_epitope_Rep1 1220.60371653272 1220.60260993586 55.904 2 0.16075122757755367 0.0006531678641410843 0.0023599898975409576 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 134762 13469 VYTTMAEHF True PC9_epitope_Rep2 1097.48518162317 1097.48408993586 57.088 2 0.1607509578952671 0.0006531678641410843 0.002360004575089149 ['ENSG00000117472|ENST00000372003|TSPAN1'] 54582 18785 KYITDWQNVF True PC9_epitope_Rep6 1312.6451874218799 1312.6440899358602 84.898 2 0.16074431713117654 0.0006531678641410843 0.002360366029651161 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 21486 7904 ERLKEAYSV True PC9_epitope_Rep3 1093.57677350889 1093.57566993586 35.384 2 0.16074096605831267 0.0006531678641410843 0.002360548448413764 ['ENSG00000174231|ENST00000304992|PRPF8'] 125531 6324 VKGDVDVSLPK True H1975_Epitope_Rep1 1155.6499384491499 1155.6482849037902 29.389 3 0.16073827184484468 0.0006531678641410843 0.002360695120636746 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 80366 8750 PGGYGYGYGR True PC9_epitope_Rep5 1045.4617437566499 1045.4606499358601 38.599 2 0.16073477466882283 0.0006531678641410843 0.0023608855194913025 ['ENSG00000102317|ENST00000376759|RBM3', 'ENST00000489344.5_1_X:48433563-48435471:+|nuORF', 'ENST00000466764.5_1_X:48434327-48435471:+|nuORF'] 12755 9556 DLEIATYR True NCI_RA007_Epitope_Rep2 979.4974605590301 979.49636993586 41.784 2 0.16073106818848773 0.0006531678641410843 0.002361087330368667 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 43358 5451 IGAEVYHNLK True NCI_RA007_Epitope_Rep3 1142.60840799034 1142.6067749037902 28.453 3 0.16073091412416773 0.0006531678641410843 0.002361095719253862 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 92820 14566 RPAQPTLWTA True PC9_epitope_Rep3 1139.60874234351 1139.60764993586 61.155 2 0.1607304682710333 0.0006531678641410843 0.0023611199963648796 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 48159 11595 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 49.927 3 0.1607297518190437 0.0006531678641410843 0.0023611590083533075 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 43681 16442 IHDGMNLEL True PC9_epitope_Rep2 1040.49608066004 1040.49498993586 68.485 2 0.16071813531856954 0.0006531678641410843 0.0023617916357500353 ['ENSG00000198258|ENST00000586895|UBL5'] 76610 19419 NQPGVLIQV True PC9_epitope_Rep2 966.5498304850599 966.54872993586 80.073 2 0.16071797760540715 0.0006531678641410843 0.002361800225875589 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 48399 8443 IYTSSVNRL True PC9_epitope_Rep6 1051.56620882519 1051.5651099358602 42.171 2 0.16071382383843372 0.0006531678641410843 0.002362026479354271 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 108474 15509 SYMEVPTYL True NCI_RA007_Epitope_Rep3 1101.50524836141 1101.5041499358601 68.565 2 0.16070915099273372 0.0006531678641410843 0.0023622810326505723 ['ENSG00000162511|ENST00000294507|LAPTM5'] 7199 10727 AQYLINARL True NCI_RA007_Epitope_Rep3 1060.60292868708 1060.60182993586 49.24 2 0.16070636614748837 0.0006531678641410843 0.0023624327501415854 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3', 'PCBP1|p.S349F|1|0.19|ENSG00000169564|chr2:70088789-70088789|C/T|missense_variant'] 60893 13674 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 57.664 2 0.16070034672759242 0.0006531678641410843 0.002362760719493631 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 86320 10170 QITVNDLPVGR True NCI_RA007_Epitope_Rep5 1210.6669854956199 1210.6658899358602 45.752 2 0.16069307244447636 0.0006531678641410843 0.0023631571210158916 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 28475 11538 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44364993586 49.364 2 0.16068893138909587 0.0006531678641410843 0.0023633828114999755 ['ENSG00000170779|ENST00000336219|CDCA4'] 19565 5666 ELQELNDR True NCI_RA007_Epitope_Rep2 1015.49343780775 1015.49234993586 26.653 2 0.16068010269169294 0.0006531678641410843 0.002363864053710137 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 71431 18432 LYTEKFEEF True PC9_epitope_Rep3 1204.5652057656796 1204.5641099358602 76.102 2 0.1606782972834483 0.0006531678641410843 0.00236396247650421 ['ENSG00000084652|ENST00000373610|TXLNA'] 107321 14710 SVLEPPLFLK True NCI_RA007_Epitope_Rep4 1141.6746966450098 1141.67358993586 64.004 2 0.1606776269907109 0.0006531678641410843 0.0023639990189124344 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 62006 19659 LLDPSVFHV True PC9_epitope_Rep4 1025.5545815123298 1025.5534899358602 83.737 2 0.16067697393229674 0.0006531678641410843 0.0023640346222981567 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 89717 10225 RADDTFEAL True NCI_RA007_Epitope_Rep1 1036.48253877088 1036.4814499358602 43.785 2 0.16067449816270188 0.0006531678641410843 0.00236416960096814 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 116748 14006 TVDNVQPLLY True H1975_Epitope_Rep2 1160.607739284 1160.60717496793 59.022 1 0.16067222613119977 0.0006531678641410843 0.0023642934786344025 ['ENSG00000145332|ENST00000273963|KLHL8'] 78237 15407 NYGLRTFLF True NCI_RA007_Epitope_Rep3 1129.59202965021 1129.59092993586 68.158 2 0.1606720524524848 0.0006531678641410843 0.002364302948362212 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000586702.1_1_19:11310175-11313198:-|nuORF', 'DOCK6|p.R1843S|1|0.38|ENSG00000130158|chr19:11202050-11202050|G/T|missense_variant'] 97935 11846 SENFEELLK True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 50.714 2 0.16066371476952496 0.0006531678641410843 0.002364757600091968 ['ENSG00000143320|ENST00000368222|CRABP2'] 130957 8757 VTDLAGNEY True H1975_Epitope_Rep1 980.4450906330001 980.44398993586 38.614 2 0.16065694039987477 0.0006531678641410843 0.0023651270690420506 ['ENSG00000197081|ENST00000356956|IGF2R'] 6978 17058 AQLELISRL True PC9_epitope_Rep6 1041.61824439805 1041.6171499358602 78.178 2 0.16065336832813898 0.0006531678641410843 0.0023653219103232995 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 88728 19918 QTIQDIVTV True PC9_epitope_Rep2 1015.5549754351499 1015.55386993586 82.01 2 0.160646627721274 0.0006531678641410843 0.0023656896253551702 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 95142 20658 RVFSDIIYTV True PC9_epitope_Rep5 1211.65502382959 1211.65392993586 84.514 2 0.16063788408593738 0.0006531678641410843 0.0023661666950932797 ['ENSG00000125676|ENST00000245838|THOC2'] 141876 19840 YVDPVITSI True PC9_epitope_Rep4 1005.53826274185 1005.53716993586 84.445 2 0.16063438393464483 0.0006531678641410843 0.0023663576970812915 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 9988 17103 AYPHNLMTF True PC9_epitope_Rep4 1092.50625142092 1092.5051499358601 73.792 2 0.16063248979133132 0.0006531678641410843 0.0023664610662172203 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 3908 10334 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47734993586 44.632 2 0.16061865433627098 0.0006531678641410843 0.0023672162456856967 ['ENSG00000075618|ENST00000382361|FSCN1'] 20794 10258 EQIEAGTPGRL True PC9_epitope_Rep1 1169.6040508858898 1169.6029499358601 44.34 2 0.1606147540424793 0.0006531678641410843 0.002367429178578023 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 126314 21238 VLIGEFLEKV True PC9_epitope_Rep2 1145.66961126457 1145.6685099358601 87.15 2 0.16060983778743732 0.0006531678641410843 0.0023676976041784943 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 5625 8774 ANTFVAELK True H1975_Epitope_Rep3 991.5338460677499 991.53274993586 38.756 2 0.16060873547014715 0.0006531678641410843 0.0023677577944427814 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 20042 13000 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 55.121 2 0.1606072943965816 0.0006531678641410843 0.002367836484254008 ['ENSG00000182195|ENST00000370526|LDOC1'] 100502 20229 SLAQYLINV True PC9_epitope_Rep6 1019.5651461960299 1019.5645749679301 90.494 1 0.16060669152049434 0.0006531678641410843 0.002367869405073151 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 97112 5204 [Acetylation]-SDKPDM[Oxidation]AEIEK True NCI_RA007_Epitope_Rep1 1319.5914978632497 1319.59038993586 24.325 2 0.16060538113423625 0.0006531678641410843 0.002367940961965969 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 90709 4425 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 22.143 2 0.16060414027682252 0.0006531678641410843 0.00236800872405466 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 97601 6594 SEEVTASQVAA True H1975_Epitope_Rep2 1090.51423282198 1090.5131299358602 30.274 2 0.16060154672084942 0.0006531678641410843 0.0023681503620292506 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 129269 14028 VQVGETFKV True PC9_epitope_Rep5 1005.5494961318899 1005.54838993586 58.975 2 0.16059784503979488 0.0006531678641410843 0.0023683525310302053 ['SMAD4|p.L540Pfs*10|1|0.09|ENSG00000141646|chr18:51078424-51078430|TACTTCA/-|frameshift_variant', 'ENSG00000141646|ENST00000342988|SMAD4'] 104709 13908 SQVDRLVAL True PC9_epitope_Rep6 999.5712942056298 999.57018993586 65.336 2 0.16058885734212702 0.0006531678641410843 0.0023688434699823506 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 29429 5916 FVEAGAM[Oxidation]AVR True NCI_RA007_Epitope_Rep1 1065.5277155219298 1065.52660993586 27.063 2 0.16058592768002325 0.0006531678641410843 0.002369003520165142 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000414406.2_1_12:20095069-20095366:+|nuORF'] 103273 12454 SPLLLQAKA True PC9_epitope_Rep5 939.5753169569099 939.57420993586 52.904 2 0.16058401236350744 0.0006531678641410843 0.0023691081615376036 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 108314 8668 SYISRTNQL True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 38.706 2 0.16058080871895694 0.0006531678641410843 0.0023692831997223726 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 68200 15828 LTDTGYLQLY True H1975_Epitope_Rep2 1185.59175486669 1185.59064993586 66.075 2 0.1605675778800978 0.0006531678641410843 0.0023700062326169158 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 87994 13638 QRNPQGFVL True PC9_epitope_Rep1 1057.5668775315298 1057.56578993586 57.313 2 0.16055777961291234 0.0006531678641410843 0.002370541825915168 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 91684 5621 RKAALEQDL True NCI_RA007_Epitope_Rep2 1042.5771078620598 1042.5760099358602 26.478 2 0.16055309859824443 0.0006531678641410843 0.0023707977424084216 ['ENSG00000100292|ENST00000216117|HMOX1'] 4621 17048 ALAAALAHI True PC9_epitope_Rep5 849.50723739709 849.50614993586 70.593 2 0.16055212329494192 0.0006531678641410843 0.002370851066842977 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21', 'ENSG00000107625|ENST00000373585|DDX50'] 77139 6462 NRPGTVSSL True PC9_epitope_Rep1 929.49304388493 929.49194993586 29.66 2 0.16054253603231505 0.0006531678641410843 0.002371375311506337 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 2474 7000 AEQLRGFNA True H1975_Epitope_Rep2 1004.5039429217999 1004.50284993586 31.849 2 0.16054215937028546 0.0006531678641410843 0.002371395910265972 ['ENSG00000196878|ENST00000356082|LAMB3'] 55818 8801 LAPEYEAAATR True PC9_epitope_Rep3 1190.59315184902 1190.5920499358601 38.804 2 0.16053789490921574 0.0006531678641410843 0.0023716291360676607 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 97261 12109 SEAEIFYNA True H1975_Epitope_Rep3 1042.46074069714 1042.4596499358602 51.742 2 0.16053542161638368 0.0006531678641410843 0.0023717644123558207 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 40047 8907 HPTEDLVVSA True PC9_epitope_Rep6 1066.5294889632999 1066.52838993586 44.225 2 0.16053209481738526 0.0006531678641410843 0.0023719463831584184 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 38573 11104 HEVIVSFTP True H1975_Epitope_Rep2 1027.53384606775 1027.53274993586 47.746 2 0.1605240452738684 0.0006531678641410843 0.002372386738532005 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF'] 23864 23654 EYIQFVPLL True PC9_epitope_Rep3 1120.6168474157198 1120.61574993586 96.271 2 0.16052308361849812 0.0006531678641410843 0.002372439351957442 ['ENSG00000179409|ENST00000319004|GEMIN4'] 105126 14652 SRFEFNQSL True PC9_epitope_Rep4 1126.54072235334 1126.5396299358601 64.291 2 0.16052090861385274 0.0006531678641410843 0.0023725583536102803 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.E805Ffs*3|1|0.08|ENSG00000048028|chr11:113805034-113805035|-/AGGTGAA|frameshift_variant', 'ENST00000545608.5_2_11:113688400-113704155:-|nuORF', 'ENST00000540438.5_1_11:113691037-113702685:-|nuORF'] 138468 18316 YHQDAFMQL True PC9_epitope_Rep1 1151.5069796969099 1151.50588993586 75.242 2 0.16051760181800862 0.0006531678641410843 0.002372739290701787 ['ENSG00000170852|ENST00000304056|KBTBD2'] 61907 7497 LLDEHHISY True H1975_Epitope_Rep3 1125.54547338061 1125.54382490379 33.819 3 0.16051325022974278 0.0006531678641410843 0.002372977416430522 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 139080 15089 YLDDPTNSWY True H1975_Epitope_Rep3 1272.52988288612 1272.52937496793 63.436 1 0.1605119366170573 0.0006531678641410843 0.0023730493040650027 ['ENSG00000064195|ENST00000434704|DLX3'] 43291 19633 IFTDLSSRF True PC9_epitope_Rep1 1084.55530978832 1084.5542099358602 80.343 2 0.16051039891607666 0.0006531678641410843 0.00237313345772547 ['ENSG00000079246|ENST00000392132|XRCC5'] 140008 5296 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54488490379 25.213 3 0.16050307441649356 0.0006531678641410843 0.002373534346045526 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 76155 12747 NMYGKVVTV True PC9_epitope_Rep5 1009.52665251233 1009.52554993586 54.038 2 0.1605000275138104 0.0006531678641410843 0.0023737011306270463 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 75420 20960 NIVNSIVGV True PC9_epitope_Rep1 913.5232813840499 913.52218993586 85.446 2 0.16049864991493315 0.0006531678641410843 0.002373776542933794 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10'] 90253 7692 REEEVTGPVIA True H1975_Epitope_Rep2 1198.61936659686 1198.61826993586 34.54 2 0.1604968088645762 0.0006531678641410843 0.0023738773291662203 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 134611 22285 VYSLQQFGF True PC9_epitope_Rep2 1087.53384606775 1087.53274993586 91.197 2 0.1604826416446467 0.0006531678641410843 0.0023746530406939903 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 101360 19824 SLITRLLEV True PC9_epitope_Rep6 1042.63864548946 1042.63754993586 88.913 2 0.16048195690735667 0.0006531678641410843 0.002374690539191659 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 54982 15643 KYQEVTNNLEF True PC9_epitope_Rep2 1383.6670450652698 1383.66594993586 65.446 2 0.1604806665101967 0.0006531678641410843 0.0023747612072511494 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 74842 12115 NHFMDNTTL True PC9_epitope_Rep4 1091.47059418819 1091.46948993586 54.408 2 0.16048010414538924 0.0006531678641410843 0.0023747920055812006 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 47831 20454 IYGYVAEQF True PC9_epitope_Rep3 1088.5178616504397 1088.51676993586 83.932 2 0.16047075823684834 0.0006531678641410843 0.0023753038996729248 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 97798 9024 SELEGTPEV True H1975_Epitope_Rep1 959.4447562798299 959.4442049679301 39.617 1 0.16046451546972618 0.0006531678641410843 0.0023756458898954815 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40'] 41185 21366 HVIDLDDATFL True PC9_epitope_Rep5 1257.62411762413 1257.6230299358601 87.243 2 0.16046294342546052 0.0006531678641410843 0.002375732017111816 ['ENSG00000152219|ENST00000282032|ARL14EP'] 109843 14187 TEELPQLINA True H1975_Epitope_Rep1 1126.5870038394198 1126.5859099358602 59.747 2 0.1604597313308746 0.0006531678641410843 0.0023759080070719974 ['ENSG00000139684|ENST00000378720|ESD'] 115101 8936 TRDETNYGI True PC9_epitope_Rep1 1067.4883524273098 1067.48724993586 39.213 2 0.16045935885145876 0.0006531678641410843 0.0023759284159802396 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 107250 16621 SVKNGFLTI True PC9_epitope_Rep2 977.55458151233 977.55348993586 69.178 2 0.1604593279429554 0.0006531678641410843 0.0023759301095281553 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 72236 19963 MHFLENISL True PC9_epitope_Rep4 1102.5481162329 1102.5470099358602 84.921 2 0.16045799234433422 0.0006531678641410843 0.002376003291197086 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 101490 22671 SLLDIIEKV True PC9_epitope_Rep5 1028.61176203528 1028.6106699358602 92.207 2 0.16045498715390577 0.0006531678641410843 0.0023761679633086874 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 115774 13143 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45454993586 55.676 2 0.16044728609970763 0.0006531678641410843 0.002376590001530104 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 90612 4926 REMPVKVEA True H1975_Epitope_Rep3 1057.5590152697698 1057.5579099358602 24.074 2 0.1604327565522939 0.0006531678641410843 0.002377386463192934 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 7132 17093 AQWHEQILV True PC9_epitope_Rep1 1122.5821932425 1122.58108993586 70.575 2 0.16042385174875315 0.0006531678641410843 0.002377874726777146 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 92061 4801 RKVEVDGSL True NCI_RA007_Epitope_Rep4 1001.5505587610498 1001.54946993586 24.903 2 0.16042105850627575 0.0006531678641410843 0.002378027905038498 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 75083 5608 NHVNSGCQL True PC9_epitope_Rep1 970.42906372938 970.42796993586 26.398 2 0.1604166519526483 0.0006531678641410843 0.0023782695754973465 ['ENSG00000177606|ENST00000371222|JUN'] 130223 9829 VSEVSSLNY True H1975_Epitope_Rep3 996.4763907612801 996.47584496793 42.835 1 0.16041339384049952 0.0006531678641410843 0.0023784482772737656 ['ENSG00000117000|ENST00000372771|RLF'] 28115 19246 FRADDTFEAL True PC9_epitope_Rep1 1183.55095268387 1183.54984993586 78.83 2 0.1604121141440741 0.0006531678641410843 0.0023785184700617352 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 88575 6276 QTDKLKELY True H1975_Epitope_Rep2 1136.6077392839998 1136.60664993586 29.084 2 0.16040805428576255 0.0006531678641410843 0.0023787411715491574 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 17642 11709 EHITSEYTL True PC9_epitope_Rep4 1091.5135045459901 1091.5124099358602 52.801 2 0.1604046106978748 0.0006531678641410843 0.0023789300841553732 ['ENSG00000179094|ENST00000317276|PER1', 'nc|ENSG00000179094|O15534-4|PER1', 'ENST00000579065.1_1_17:8052750-8054072:-|nuORF'] 4810 6803 ALEEAMEQK True PC9_epitope_Rep3 1047.4906609264297 1047.4895699358601 31.185 2 0.16040386392949219 0.0006531678641410843 0.0023789710532764806 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 26201 21168 FHDHALMIIF True PC9_epitope_Rep5 1242.6219498795 1242.62029490379 86.472 3 0.16038985169893888 0.0006531678641410843 0.0023797399213298727 ['ENSG00000198712|ENST00000361739|MT-CO2'] 118289 16083 TYLPTSPLL True NCI_RA007_Epitope_Rep5 1003.55899818643 1003.55847496793 68.593 1 0.1603846254101621 0.0006531678641410843 0.0023800267576624813 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 85049 15674 QEIFEVNNLP True H1975_Epitope_Rep2 1201.59790287629 1201.5968099358602 65.449 2 0.16038443278321385 0.0006531678641410843 0.0023800373303380067 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000554892.1_1_14:24028960-24029314:-|nuORF', 'ENST00000557391.1_1_14:24028960-24029655:-|nuORF'] 137853 5959 YESLTDPSK True NCI_RA007_Epitope_Rep1 1038.48695544498 1038.4858499358602 27.226 2 0.16038367772196246 0.0006531678641410843 0.0023800787736812626 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 14756 21920 DVNFEFPEFQL True NCI_RA007_Epitope_Rep5 1383.63468230783 1383.63358993586 91.448 2 0.16037884336888242 0.0006531678641410843 0.002380344135796444 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 106160 7131 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4548899358601 32.362 2 0.16037650834533992 0.0006531678641410843 0.0023804723179824683 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 111427 14763 THSNTIVVSL True PC9_epitope_Rep3 1069.57677350889 1069.57566993586 61.922 2 0.16037624614337342 0.0006531678641410843 0.002380486712109932 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 31934 9173 GEMWSEQSA True H1975_Epitope_Rep3 1023.39676054159 1023.39617496793 40.275 1 0.16037619499310565 0.0006531678641410843 0.002380489520121408 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 40708 7855 HRSGIESAL True PC9_epitope_Rep5 968.5039429218 968.50284993586 35.157 2 0.16036409869578538 0.0006531678641410843 0.0023811536670586882 ['ENSG00000114446|ENST00000264538|IFT57'] 21894 13889 ESDLDYIQY True H1975_Epitope_Rep2 1144.4924347482402 1144.4913299358602 58.569 2 0.16035382517870658 0.0006531678641410843 0.002381717879613775 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 40992 10727 HTEPLDELY True H1975_Epitope_Rep2 1115.51350454599 1115.5124099358602 46.288 2 0.16034816377986758 0.0006531678641410843 0.002382028855736581 ['ENST00000522601.5_1_8:8086126-8093767:+|nuORF', 'ENST00000528684.5_1_11:67565540-67568567:-|nuORF', 'ENST00000478302.1_1_7:6976193-6979213:-|nuORF', 'ENST00000585436.5_1_16:5139172-5145393:-|nuORF', 'ENST00000526393.5_1_11:71502805-71507278:+|nuORF', 'ENST00000585975.5_1_16:5140431-5147740:-|nuORF', 'nc|ENSG00000290994|A6NEL3|FAM86C2P', 'nc|ENSG00000158483|Q9NVL1|FAM86C1P', 'ENST00000510506.5_1_4:3945015-3952874:-|nuORF', 'ENST00000340703.5_1_4:9694764-9704575:+|nuORF', 'ENSG00000118894|ENST00000427587|EEF2KMT'] 138356 15535 YHFPDQQEL True PC9_epitope_Rep2 1175.52473793603 1175.52364993586 65.028 2 0.1603445271761182 0.0006531678641410843 0.0023822286328698443 ['ENSG00000165490|ENST00000533655|DDIAS', 'DDIAS|p.P901T|1|0.37|ENSG00000165490|chr11:82934039-82934039|C/A|missense_variant'] 32565 5898 GGGQIIPTAR True NCI_RA007_Epitope_Rep5 968.5403284305199 968.53922993586 29.374 2 0.1603437096092362 0.0006531678641410843 0.0023822735482791654 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 99494 6334 SIDDQSQQSY True H1975_Epitope_Rep3 1169.4836609696902 1169.48256993586 29.354 2 0.1603432797975979 0.0006531678641410843 0.002382297161568062 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 54839 16600 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 71.971 2 0.1603383871656065 0.0006531678641410843 0.002382565972842215 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 137887 11483 YEVKELYVP True NCI_RA007_Epitope_Rep5 1138.5910265906998 1138.58992993586 50.817 2 0.16033753817467544 0.0006531678641410843 0.002382612621236043 ['ENSG00000138801|ENST00000265174|PAPSS1'] 131109 12394 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.5222499358601 52.759 2 0.16032781063499252 0.0006531678641410843 0.0023831471727351183 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 63551 12483 LM[Oxidation]DHTIPEV True PC9_epitope_Rep1 1069.51139675145 1069.51028993586 52.883 2 0.16032765273855987 0.0006531678641410843 0.0023831558505083587 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 90092 5770 REAFEAIKAA True NCI_RA007_Epitope_Rep3 1104.5927579261997 1104.5916699358602 29.678 2 0.16032664431520285 0.0006531678641410843 0.0023832112728292493 ['ENSG00000173141|ENST00000309594|MRPL57'] 109160 19731 TAM[Oxidation]DVVYAL True PC9_epitope_Rep1 997.4790339940099 997.47792993586 80.723 2 0.16032301874822022 0.0006531678641410843 0.0023834105423706496 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 108044 23005 SYADQMFLL True PC9_epitope_Rep3 1086.50558271458 1086.5044899358602 93.754 2 0.1603227537326464 0.0006531678641410843 0.0023834251088917418 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 115413 19290 TRLPEFSEL True PC9_epitope_Rep5 1090.56587447202 1090.56476993586 79.242 2 0.1603177178806249 0.0006531678641410843 0.002383701920256663 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 38956 18426 HHIPDVITYL True PC9_epitope_Rep4 1206.63970811862 1206.6386099358601 78.944 2 0.16031657949806963 0.0006531678641410843 0.0023837644994653814 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 83341 13899 PTEISQSLLY True H1975_Epitope_Rep2 1149.59175486669 1149.59064993586 58.608 2 0.16031615468779217 0.0006531678641410843 0.002383787852572339 ['ENSG00000103335|ENST00000301015|PIEZO1'] 88953 15252 QVIAGFNRL True PC9_epitope_Rep2 1016.57671393924 1016.57560993586 63.941 2 0.16031568108349004 0.0006531678641410843 0.002383813888303911 ['ENSG00000143256|ENST00000368010|PFDN2'] 121712 16027 VFLENVIR True PC9_epitope_Rep6 988.5705659296399 988.56946993586 73.973 2 0.16031423704054515 0.0006531678641410843 0.0023838932742904525 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 95623 10790 RYALQMEQL True NCI_RA007_Epitope_Rep3 1150.5804789903398 1150.57938993586 49.486 2 0.16031412527977365 0.0006531678641410843 0.00238389941842771 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 2181 11239 AELWGEQAEA True H1975_Epitope_Rep1 1102.49310345458 1102.4925749679298 48.205 1 0.1603085325650994 0.0006540935353755587 0.0023842069025614915 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 87892 7275 QRIDSDDAL True PC9_epitope_Rep2 1031.4883524273098 1031.48724993586 33.371 2 0.16030648239309225 0.0006540935353755587 0.002384319629722772 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 106985 10125 SVELPIVGK True NCI_RA007_Epitope_Rep3 940.5593325395998 940.55822993586 46.915 2 0.16030339120644826 0.0006540935353755587 0.002384489606352023 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 75057 14477 NHTIYINNL True PC9_epitope_Rep5 1100.5614577979202 1100.56036993586 60.686 2 0.16030229774007324 0.0006540935353755587 0.002384549736233152 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 1994 6147 AEIPETSNA True H1975_Epitope_Rep3 930.4294405688601 930.4288949679301 28.655 1 0.1603000092593421 0.0006540935353755587 0.002384675585035398 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 9923 20496 AYLPVNESF True PC9_epitope_Rep1 1038.5022115863 1038.50110993586 83.65 2 0.16029512884888525 0.0006540935353755587 0.0023849439921533344 ['ENSG00000167658|ENST00000309311|EEF2'] 76401 13538 NQDDSILKV True PC9_epitope_Rep3 1030.5294889632999 1030.52838993586 57.128 2 0.16029478613685247 0.0006540935353755587 0.0023849628413634013 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 76862 13968 NRDGNIVFV True PC9_epitope_Rep2 1032.5352430500798 1032.5341499358601 59.002 2 0.16028801559138345 0.0006540935353755587 0.0023853352528225335 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 96301 17072 RYSDSTFTF True PC9_epitope_Rep1 1122.49818883502 1122.49708993586 70.494 2 0.16028444975783585 0.0006540935353755587 0.0023855314135833427 ['ENSG00000151883|ENST00000281631|PARP8'] 114889 9331 TQSEKQFVV True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 40.748 2 0.16028431086791323 0.0006540935353755587 0.002385539054409778 ['ENSG00000163902|ENST00000296255|RPN1'] 104351 18329 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54370993586 75.711 2 0.16028425949453134 0.0006540935353755587 0.0023855418806476166 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 48138 20498 IYPEVVHMF True PC9_epitope_Rep5 1133.5579526406098 1133.55684993586 83.885 2 0.16028402170186848 0.0006540935353755587 0.002385554962536215 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 77637 8427 NTFSVVPSPK True H1975_Epitope_Rep1 1074.5709598524597 1074.5698699358602 37.34 2 0.16027531909118142 0.0006540935353755587 0.0023860337759024986 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 84261 21644 PYNPILGETF True PC9_epitope_Rep1 1149.57062549929 1149.5695299358601 88.082 2 0.16026991595639814 0.0006540935353755587 0.002386331102017341 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 47426 22218 IVLPEDLQL True PC9_epitope_Rep5 1038.5961119711399 1038.5950099358602 90.468 2 0.16026510196544042 0.0006540935353755587 0.0023865960396323347 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 6652 19348 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 79.468 2 0.1602642176362896 0.0006540935353755587 0.0023866447118115496 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 72064 8280 MEVAVEKAVAA True H1975_Epitope_Rep2 1116.58489566444 1116.58378993586 36.799 2 0.16026300813106067 0.0006540935353755587 0.002386711282810223 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 1072 5476 AEAIHSPQV True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 26.083 2 0.16026275004794593 0.0006540935353755587 0.002386725487908838 ['ENSG00000047410|ENST00000367478|TPR'] 21522 16693 ERMGYTITL True PC9_epitope_Rep4 1082.5430308524599 1082.54192993586 72.184 2 0.16026205473685595 0.0006540935353755587 0.0023867637588009475 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 115042 13896 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 61.352 2 0.16025725129296592 0.0006540935353755587 0.0023870281637938936 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 100182 6091 SITTVQIQK True NCI_RA007_Epitope_Rep5 1016.5866099166 1016.58550993586 30.111 2 0.16025721170343976 0.0006540935353755587 0.002387030343116152 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 39088 7800 HHTTQQTFL True PC9_epitope_Rep1 1111.54105670651 1111.53994993586 34.826 2 0.16025573998020332 0.0006540935353755587 0.002387111359873299 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 78220 22748 NYGDYFNVF True PC9_epitope_Rep3 1137.47672511445 1137.47562993586 92.767 2 0.1602513468457078 0.0006540935353755587 0.0023873532134639527 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 11787 17897 DHDRFWVL True PC9_epitope_Rep6 1086.52467836638 1086.5235899358602 81.466 2 0.16024625114178578 0.0006540935353755587 0.0023876337760018037 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 430 10054 AALPKATIL True H1975_Epitope_Rep2 896.5695033004799 896.56840993586 43.664 2 0.1602453198827314 0.0006540935353755587 0.0023876850534193636 ['ENSG00000108829|ENST00000225972|LRRC59'] 38529 11506 HESAEIFVV True H1975_Epitope_Rep2 1029.5131106231697 1029.51200993586 49.315 2 0.1602447278719635 0.0006540935353755587 0.0023877176515623892 ['ENSG00000108592|ENST00000427159|FTSJ3', 'FTSJ3|p.A327Efs*42|1|0.3|ENSG00000108592|chr17:63824349-63824349|G/-|frameshift_variant'] 68124 11565 LTDPIQGTEY True H1975_Epitope_Rep3 1135.53971929383 1135.5386299358602 49.613 2 0.16024282002527598 0.0006540935353755587 0.0023878227071676837 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 141370 7122 YTEEDAASY True H1975_Epitope_Rep2 1047.40328539067 1047.4027749679299 32.327 1 0.16024171144212582 0.0006540935353755587 0.002387883753435249 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 128768 18560 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 76.178 2 0.16022950954749657 0.0006540935353755587 0.002388555777278142 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 104910 16810 SRDDNMFQI True PC9_epitope_Rep2 1124.49205790876 1124.4909699358602 69.909 2 0.16022778763706577 0.0006540935353755587 0.002388650627336333 ['ENSG00000113387|ENST00000265073|SUB1'] 75147 6515 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59746993586 30.475 2 0.16022575142887865 0.0006540935353755587 0.002388762795089073 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 91608 5915 RILSGVVTK True NCI_RA007_Epitope_Rep4 971.61276509479 971.61166993586 29.374 2 0.16021573047567805 0.0006540935353755587 0.0023893148918176094 ['ENSG00000142534|ENST00000270625|RPS11'] 31809 14788 GEIIDIFKP True H1975_Epitope_Rep2 1030.5698972233 1030.5688099358601 62.041 2 0.16021150959077118 0.0006540935353755587 0.002389547476373983 ['nc|ENSG00000145730|P19021-4|PAM', 'nc|ENSG00000145730|P19021-3|PAM', 'ENST00000510006.5_1_5:102343180-102364608:+|nuORF', 'nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM', 'ENST00000504456.1_1_5:102343300-102364769:+|nuORF'] 24213 21088 EYSIVIQQL True PC9_epitope_Rep2 1091.58627556343 1091.5851699358602 86.572 2 0.1602108252957329 0.0006540935353755587 0.0023895851853974735 ['nc|ENSG00000244038|P39656-2|DDOST', 'nc|ENSG00000244038|P39656-3|DDOST', 'ENSG00000244038|ENST00000602624|DDOST', 'nc|ENSG00000244038|P39656|DDOST'] 90693 6982 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 31.819 2 0.1602102422451795 0.0006540935353755587 0.0023896173156726626 ['ENSG00000129250|ENST00000320785|KIF1C'] 19563 8767 ELQEIQLK True NCI_RA007_Epitope_Rep1 999.56006081559 999.55896993586 38.104 2 0.16020893665686442 0.0006540935353755587 0.002389689264535305 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 8756 11597 AVDAVIAELK True NCI_RA007_Epitope_Rep2 1027.5913609438699 1027.59026993586 49.7 2 0.16020707555404537 0.0006540935353755587 0.0023897918306448325 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 6715 7727 AQAPDLQRV True PC9_epitope_Rep4 996.5352430500799 996.53414993586 37.11 2 0.16019860748757597 0.0006540935353755587 0.0023902585646369567 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 17425 9107 EHDPVGQMV True PC9_epitope_Rep4 1010.44913046762 1010.44802993586 42.617 2 0.16019019142896612 0.0006540935353755587 0.0023907225223120327 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 132232 16779 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 69.546 2 0.16018698940156312 0.0006540935353755587 0.0023908990662293464 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 57663 4825 LEEERTPTP True H1975_Epitope_Rep3 1070.52440358286 1070.5233099358602 23.686 2 0.1601869582873146 0.0006540935353755587 0.0023909007817786362 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 90322 4826 REFDNPDTA True NCI_RA007_Epitope_Rep4 1063.45705229903 1063.4559499358602 24.998 2 0.16018485147833195 0.0006540935353755587 0.0023910169479663046 ['RCBTB2|p.K385N|1|0.19|ENSG00000136161|chr13:48501831-48501831|C/A|missense_variant', 'nc|ENSG00000136161|O95199-2|RCBTB2', 'ENSG00000136161|ENST00000344532|RCBTB2'] 54395 19352 KYFEVPSVL True PC9_epitope_Rep4 1080.5855472874398 1080.5844499358602 82.547 2 0.16017901793703346 0.0006540935353755587 0.0023913386298201234 ['ENSG00000131966|ENST00000254286|ACTR10'] 155 10874 AADPSVVNL True H1975_Epitope_Rep1 884.46034677432 884.4597949679301 46.786 1 0.16017437680919033 0.0006540935353755587 0.0023915945887006047 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 9904 20031 AYLLNLNHL True PC9_epitope_Rep2 1069.59202965021 1069.59092993586 82.453 2 0.1601675118427821 0.0006540935353755587 0.0023919732427710584 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 89457 18665 QYESKVFYL True PC9_epitope_Rep5 1175.5862755634298 1175.5851699358602 76.818 2 0.16016712073078407 0.0006540935353755587 0.0023919948173157807 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 135061 4819 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 23.627 2 0.16016621579862347 0.0006540935353755587 0.0023920447359857358 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 98931 15915 SHAENILQI True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 66.028 2 0.16016013520293454 0.0006540935353755587 0.002392380186177861 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 130225 9717 VSEYISSDGSY True H1975_Epitope_Rep1 1205.5088130883698 1205.50770993586 42.304 2 0.16015697924900207 0.0006540935353755587 0.0023925543102298525 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12'] 4010 14554 AHESAVTGLSL True PC9_epitope_Rep1 1083.55603806431 1083.5549499358601 60.806 2 0.16015588224862395 0.0006540935353755587 0.002392614838206464 ['ENSG00000110107|ENST00000227524|PRPF19'] 95767 12056 RYIANTVEL True PC9_epitope_Rep6 1077.58185888933 1077.5807699358602 57.685 2 0.1601441795224118 0.0006540935353755587 0.002393260641769344 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 15053 9926 DYQALRTSI True NCI_RA007_Epitope_Rep4 1065.54547338061 1065.54436993586 45.025 2 0.16013905494156264 0.0006540935353755587 0.002393543491580979 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 17333 9233 EHAQEVVL True PC9_epitope_Rep1 923.4712458111899 923.47014993586 40.367 2 0.16013745018511513 0.0006540935353755587 0.0023936320725296465 ['ENSG00000080608|ENST00000397885|PUM3'] 118293 21325 TYLPTSPLL True PC9_epitope_Rep2 1003.55899818643 1003.55847496793 87.491 1 0.1601336504131038 0.0006540935353755587 0.0023938418291927777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 26434 12760 FIDASRLVY True H1975_Epitope_Rep2 1082.5760452329 1082.57494993586 54.185 2 0.16012356780880707 0.0006540935353755587 0.0023943985024726566 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 49910 19567 KIIGAVDQIQL True PC9_epitope_Rep5 1196.71287305888 1196.71176993586 80.314 2 0.1601144368547314 0.0006540935353755587 0.002394902745495753 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 88286 12406 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52256993586 52.754 2 0.16011241047958708 0.0006540935353755587 0.002395014663352813 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 49069 12175 KEIDVISIP True H1975_Epitope_Rep1 1012.580461907 1012.57936993586 51.85 2 0.1601046118919406 0.0006540935353755587 0.002395445432537867 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 1594 5879 AEFAERTVA True NCI_RA007_Epitope_Rep4 992.4927095317599 992.49160993586 29.238 2 0.16010016383694356 0.0006540935353755587 0.0023956911636036117 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 17459 15758 EHFAALQSL True PC9_epitope_Rep4 1014.51344497634 1014.51234993586 68.536 2 0.16009982669501743 0.0006540935353755587 0.002395709789904315 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 40953 13158 HTDDPLTWDY True H1975_Epitope_Rep1 1261.52513185885 1261.52457496793 55.706 1 0.16009888123894667 0.0006540935353755587 0.0023957620249062724 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 132205 16634 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 69.229 2 0.1600980459956432 0.0006540935353755587 0.002395808171767618 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 111559 9098 TIAQDYGVLK True H1975_Epitope_Rep1 1106.5971746003 1106.5960699358602 39.899 2 0.16008689857268776 0.0006540935353755587 0.002396424147455361 ['ENSG00000117450|ENST00000319248|PRDX1'] 40376 5685 HQSSVGSVL True NCI_RA007_Epitope_Rep3 912.46649478392 912.46538993586 29.343 2 0.16008636166049464 0.0006540935353755587 0.002396453819726583 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant', 'UTRN|p.Q931Rfs*4|1|0.33|ENSG00000152818|chr6:144461278-144461278|C/-|frameshift_variant'] 116741 13258 TVDNARIVL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 56.007 2 0.16007448353001372 0.0006540935353755587 0.0023971103544542117 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 104265 15512 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 67.592 2 0.16007096494080275 0.0006540935353755587 0.0023973048703846683 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 24003 9134 EYMKHTRLF True PC9_epitope_Rep2 1223.6121134717898 1223.61046490379 40.474 3 0.16006871755476026 0.0006540935353755587 0.0023974291194478 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 34566 4424 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 23.65 2 0.16006769337632681 0.0006540935353755587 0.002397485744345537 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 78433 19609 NYLSIFRKF True PC9_epitope_Rep2 1186.6498788795 1186.6482449037899 80.81 3 0.1600633462446277 0.0006540935353755587 0.0023977261039404966 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 2185 11406 AELWGEQAEA True H1975_Epitope_Rep3 1102.49310345458 1102.4925749679298 48.989 1 0.1600610743637162 0.0006540935353755587 0.0023978517293034374 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 73209 20126 MRYVASYLLA True PC9_epitope_Rep3 1185.6216155263298 1185.6205099358601 82.668 2 0.160058154808657 0.0006540935353755587 0.0023980131779463274 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 39241 18530 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 76.299 2 0.16005389862936975 0.0006540935353755587 0.0023982485600977446 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 99769 20625 SIIQRLLEV True PC9_epitope_Rep4 1069.64954452633 1069.64844993586 87.49 2 0.16005077550289734 0.0006540935353755587 0.002398421294996114 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 103411 8595 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 37.896 2 0.1600494631675537 0.0006540935353755587 0.0023984938817748803 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 40260 17976 HQLALISQL True PC9_epitope_Rep4 1021.59202965021 1021.59092993586 77.197 2 0.1600393616697852 0.0006540935353755587 0.0023990526806858905 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 87891 8388 QRIDSDDAL True PC9_epitope_Rep1 1031.4883524273098 1031.48724993586 37.101 2 0.16003898594888283 0.0006540935353755587 0.0023990734674807427 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 139970 19313 YQDEVFGGF True PC9_epitope_Rep6 1060.4501760134397 1060.44967496793 86.936 1 0.16002900913233029 0.0006540935353755587 0.0023996255016153615 ['ENSG00000145907|ENST00000356245|G3BP1'] 108921 11071 TADHNLLLY True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 47.548 2 0.160028268303537 0.0006540935353755587 0.0023996664979846188 ['ENSG00000183751|ENST00000568546|TBL3'] 25304 12467 FDQLLAEEK True PC9_epitope_Rep5 1091.5498900547097 1091.5487899358602 52.953 2 0.16002566093066872 0.0006540935353755587 0.002399810791704224 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 75075 11223 NHVASDISL True PC9_epitope_Rep5 954.47705946762 954.47596993586 48.159 2 0.1600205789876755 0.0006540935353755587 0.0024000920546553423 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 54535 5035 KYIHSANVL True NCI_RA007_Epitope_Rep3 1043.57637958607 1043.5752899358602 26.799 2 0.16002018950918157 0.0006540935353755587 0.002400113611916535 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 89413 20350 QYASAFHFL True PC9_epitope_Rep5 1082.51853035678 1082.51742993586 83.311 2 0.16001623331918988 0.0006540935353755587 0.002400332594196898 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 133975 12474 VYIPSKTDL True PC9_epitope_Rep4 1034.5648118428599 1034.56370993586 55.787 2 0.16000994830647963 0.0006540935353755587 0.0024006805220596916 ['ENSG00000145912|ENST00000274606|NHP2'] 107382 20060 SVLKSLVEI True PC9_epitope_Rep1 986.6011973515799 986.60010993586 81.987 2 0.16000964709868162 0.0006540935353755587 0.0024006971976876235 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 111148 21545 THFNFAIVF True PC9_epitope_Rep2 1094.5549158654999 1094.55380993586 88.341 2 0.16000764411978005 0.0006540935353755587 0.002400808090623877 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 21196 9486 ERDMSNVSL True PC9_epitope_Rep4 1049.48115887189 1049.48006993586 44.101 2 0.16000764050925925 0.0006540935353755587 0.0024008082905213907 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 48351 9307 IYSTKLYRF True NCI_RA007_Epitope_Rep4 1189.6495445263297 1189.64788490379 42.654 3 0.16000557223275733 0.0006540935353755587 0.0024009228039721764 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 35143 9489 GQWKKGFVL True NCI_RA007_Epitope_Rep2 1061.6022004110898 1061.6011099358602 41.523 2 0.16000457416834174 0.0006540935353755587 0.0024009780653628876 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 90501 4124 RELEVQHPAA True H1975_Epitope_Rep3 1148.59382055536 1148.59272993586 20.987 2 0.16000306352365037 0.0006540935353755587 0.002401061710002238 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 91549 15855 RIIDVVYNA True PC9_epitope_Rep2 1061.58694426977 1061.58584993586 66.245 2 0.15999698700424328 0.0006540935353755587 0.002401398197254634 ['ENSG00000142937|ENST00000396651|RPS8'] 2903 13349 AEWLGVLKA True NCI_RA007_Epitope_Rep4 985.5596668927699 985.55856993586 58.497 2 0.15999554786559717 0.0006540935353755587 0.0024014778964517947 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 85123 8812 QELPPPPPP True H1975_Epitope_Rep2 970.5123823471798 970.51128993586 38.862 2 0.15998178470665717 0.0006540935353755587 0.0024022402307541982 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant', 'UTRN|p.Q931Rfs*4|1|0.33|ENSG00000152818|chr6:144461278-144461278|C/-|frameshift_variant', 'UTRN|p.K679R|1|0.34|ENSG00000152818|chr6:144448733-144448733|A/G|missense_variant'] 31342 5857 GDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1156.47065413828 1156.4695499358602 27.401 2 0.15997858592105682 0.0006540935353755587 0.0024024174444532836 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 54859 21808 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 89.183 2 0.1599756215901197 0.0006540935353755587 0.002402581680947388 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 66880 16364 LSNIFVIGK True PC9_epitope_Rep6 989.5909670210499 989.58986993586 75.329 2 0.1599746872154938 0.0006540935353755587 0.002402633451584774 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 3514 9704 AGLQFPVGR True H1975_Epitope_Rep1 943.5239500903898 943.52284993586 42.252 2 0.1599691378241267 0.0006540935353755587 0.002402940948139618 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 105618 9316 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4603699358602 40.829 2 0.15995830628297553 0.0006540935353755587 0.0024035412463832813 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 22335 4456 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 22.253 2 0.15995695192406328 0.0006540935353755587 0.0024036163172667054 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 14734 9293 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 40.74 2 0.15995564421986044 0.0006540935353755587 0.002403688804343908 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 69579 14422 LVDHFMELY True H1975_Epitope_Rep2 1165.5477818797299 1165.54668993586 60.627 2 0.15995201912932902 0.0006540935353755587 0.0024038897573901152 ['ENSG00000101407|ENST00000373447|TTI1'] 21547 11194 ERNLQSDVL True PC9_epitope_Rep1 1072.55128703704 1072.55018993586 47.939 2 0.1599518357106916 0.0006540935353755587 0.002403899925453511 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 1248 12490 AEDFTIFKA True H1975_Epitope_Rep2 1040.5178616504397 1040.51676993586 53.134 2 0.15995165589416718 0.0006540935353755587 0.0024039098938705315 ['ENSG00000163001|ENST00000349456|CFAP36', 'nc|ENSG00000163001|Q96G28-2|CFAP36'] 23850 13253 EYIPKWEQF True NCI_RA007_Epitope_Rep4 1238.5971746003 1238.5960699358602 58.109 2 0.1599478337933098 0.0006540935353755587 0.0024041217879170523 ['ENSG00000114405|ENST00000462069|C3orf14'] 60888 12589 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 53.732 2 0.15994602084461232 0.0006540935353755587 0.0024042223027848763 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 72844 5749 MPNGTPHPTA True PC9_epitope_Rep1 1021.46511488493 1021.46400993586 26.931 2 0.15994324756851697 0.0006540935353755587 0.002404376068967982 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 47427 20180 IVLPEDLQL True PC9_epitope_Rep6 1038.5961119711399 1038.5950099358602 90.295 2 0.1599412046318191 0.0006540935353755587 0.0024044893472673786 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 74986 5157 NHQGGSVQL True PC9_epitope_Rep3 938.4569927293799 938.45588993586 24.92 2 0.15993904753806987 0.0006540935353755587 0.0024046089612179493 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant', 'MACC1|p.D299Ifs*7|1|0.2|ENSG00000183742|chr7:20159466-20159466|C/-|frameshift_variant'] 54258 16828 KWNPTAGVAF True PC9_epitope_Rep4 1089.56072952193 1089.5596299358601 72.706 2 0.15993902247843592 0.0006540935353755587 0.0024046103508456066 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 31890 4853 GELPRQPTT True NCI_RA007_Epitope_Rep4 997.5192586327701 997.51816993586 25.109 2 0.1599309903714495 0.0006540935353755587 0.002405055795245669 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 54797 10261 KYPDAVATW True NCI_RA007_Epitope_Rep5 1049.51819600361 1049.5170899358602 46.099 2 0.1599290202755288 0.0006540935353755587 0.0024051650653628205 ['CON__P31096', 'ENST00000505146.1_1_4:88898047-88901296:+|nuORF', 'ENST00000508002.5_1_4:88896921-88901631:+|nuORF', 'nc|ENSG00000118785|P10451-4|SPP1', 'nc|ENSG00000118785|P10451-5|SPP1', 'ENSG00000118785|ENST00000395080|SPP1', 'ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 35125 17723 GQWASVIRV True PC9_epitope_Rep2 1014.5610638750999 1014.55996993586 73.453 2 0.15992311276504192 0.0006540935353755587 0.0024054927513970452 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 112620 12007 TLETVPLER True PC9_epitope_Rep5 1056.5815245361598 1056.5804299358601 51.179 2 0.15992202917715415 0.0006540935353755587 0.0024055528622005757 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 91612 20835 RIMPEDIIINC True PC9_epitope_Rep1 1315.6628287153098 1315.6617299358602 84.969 2 0.15991791245408662 0.0006540935353755587 0.0024057812463977495 ['ENSG00000198900|ENST00000361337|TOP1'] 114730 14339 TQILSVPKV True PC9_epitope_Rep6 983.6015317047498 983.60042993586 67.052 2 0.159916992478529 0.0006540935353755587 0.002405832287009743 ['nc|ENSG00000120802|P42166|TMPO'] 7872 13030 ATADYICKV True PC9_epitope_Rep5 982.4793679667399 982.47826993586 55.124 2 0.1599107498555983 0.0006540935353755587 0.0024061786587934036 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 65270 12001 LQVEEVHQL True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 53.958 2 0.15990911717416448 0.0006540935353755587 0.0024062692562986467 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 17897 14175 EHYYNAISV True PC9_epitope_Rep5 1094.50327421546 1094.5021699358601 59.534 2 0.15989582894263507 0.0006540935353755587 0.002407006747066623 ['ENSG00000198730|ENST00000361367|CTR9'] 142682 13626 YYPSTPGRYSI True PC9_epitope_Rep4 1302.6244519773 1302.62334993586 60.305 2 0.15989433509610806 0.0006540935353755587 0.002407089668977705 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 77214 17669 NRTELPLTL True PC9_epitope_Rep2 1055.59750895347 1055.59640993586 73.243 2 0.15988911852877039 0.0006540935353755587 0.002407379257733989 ['ENSG00000105447|ENST00000253237|GRWD1'] 58040 12949 LEIEKSLLV True H1975_Epitope_Rep2 1042.62741209942 1042.62630993586 54.923 2 0.15988694555084126 0.0006540935353755587 0.002407499897127672 ['ENSG00000164366|ENST00000296824|CCDC127'] 11460 6945 DFDTYDDR True H1975_Epitope_Rep3 1045.39886871657 1045.3977699358602 31.675 2 0.1598827628159479 0.0006540935353755587 0.0024077321312081673 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF', 'nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H'] 90152 7380 REDENLQVP True H1975_Epitope_Rep2 1098.53055159246 1098.5294499358602 33.327 2 0.15987303889009435 0.0006540935353755587 0.0024082721101157723 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF', 'MTMR3|p.C235Qfs*20|1|0.17|ENSG00000100330|chr22:30007143-30007152|GCTGTGGACA/-|frameshift_variant'] 1286 7713 AEDPETQVV True H1975_Epitope_Rep2 986.4556553166999 986.45454993586 34.621 2 0.15987044003728107 0.0006540935353755587 0.0024084164473777434 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 34054 23592 GLVPFLVSV True PC9_epitope_Rep1 929.5586042636099 929.55750993586 95.535 2 0.15986784805645268 0.0006540935353755587 0.0024085604115821092 ['ENSG00000182481|ENST00000330459|KPNA2'] 54363 12729 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.5338699358601 53.836 2 0.15985885367981012 0.0006540935353755587 0.002409060045308546 ['ENSG00000123975|ENST00000314355|CKS2'] 63559 15997 LMDHTIPEV True PC9_epitope_Rep1 1053.51648175145 1053.5153899358602 66.343 2 0.15984865470569065 0.0006540935353755587 0.0024096267191248775 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 95691 16609 RYFKGPELL True PC9_epitope_Rep1 1121.6233297784897 1121.62222993586 68.713 2 0.1598455175570926 0.0006540935353755587 0.0024098010516558467 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 138818 9350 YIYDGELVSK True NCI_RA007_Epitope_Rep3 1185.5917548666896 1185.59064993586 43.87 2 0.159837632652597 0.0006540935353755587 0.0024102392743858376 ['ENSG00000117620|ENST00000533028|SLC35A3', 'nc|ENSG00000283761|Q9Y2D2-2|SLC35A3'] 93054 7524 RPNDIM[Oxidation]AEV True PC9_epitope_Rep2 1059.50189469691 1059.5007899358602 34.309 2 0.15983552257235822 0.0006540935353755587 0.0024103565607203384 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 93399 6331 RQAQEYEAL True NCI_RA007_Epitope_Rep4 1106.5356369728997 1106.53452993586 30.956 2 0.15983480326825744 0.0006540935353755587 0.0024103965436974486 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 18879 7552 ELDSNLYR True NCI_RA007_Epitope_Rep2 1008.48762415132 1008.48652993586 34.001 2 0.15983180927801507 0.0006540935353755587 0.0024105629736700124 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 48874 9097 KEAIETIVAA True H1975_Epitope_Rep3 1043.5862755634298 1043.5851699358602 39.98 2 0.15982994154330968 0.0006540935353755587 0.0024106668031457904 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 106697 8454 STTQVVGILK True NCI_RA007_Epitope_Rep5 1044.6179100448799 1044.6168099358601 39.2 2 0.15982831777228018 0.0006540935353755587 0.002410757074035105 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 107041 9929 SVFSKYFER True NCI_RA007_Epitope_Rep3 1161.5818588893299 1161.58021490379 46.138 3 0.15982378480433335 0.0006540935353755587 0.002411009094824829 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 71751 4179 MEEQVTKAEA True H1975_Epitope_Rep2 1134.5226893307 1134.5215899358602 21.183 2 0.15981584609197064 0.0006540935353755587 0.0024114505292040173 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 108919 10858 TADHNLLLY True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 46.724 2 0.1598089843749171 0.0006540935353755587 0.0024118321419775747 ['ENSG00000183751|ENST00000568546|TBL3'] 131134 7208 VTEGSFVYK True NCI_RA007_Epitope_Rep5 1028.5178616504397 1028.51676993586 34.403 2 0.1598012171854016 0.0006540935353755587 0.0024122641851563645 ['ENSG00000057608|ENST00000380191|GDI2'] 103902 11869 SQAEKVYIM True PC9_epitope_Rep5 1067.5321318155898 1067.53102993586 50.653 2 0.1597952324450421 0.0006540935353755587 0.0024125971338630754 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000515766.1_1_4:1332171-1332954:+|nuORF'] 24280 12520 EYTLMRATF True NCI_RA007_Epitope_Rep4 1130.5430308524599 1130.54192993586 55.176 2 0.15979327171610727 0.0006540935353755587 0.002412706224959826 ['ENSG00000185950|ENST00000375856|IRS2'] 40669 9743 HRQEIQVVL True PC9_epitope_Rep6 1120.63529144452 1120.6341899358601 47.899 2 0.1597910590371541 0.0006540935353755587 0.002412829339975441 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 111500 16144 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62844993586 70.037 2 0.15977594279381402 0.0006540935353755587 0.002413670586243848 ['ENSG00000076003|ENST00000264156|MCM6'] 107094 12240 SVHKGFAFV True PC9_epitope_Rep3 990.5287011176598 990.52760993586 52.112 2 0.1597755316943628 0.0006540935353755587 0.002413693468762056 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 88568 12829 QTDIQGALSAY True H1975_Epitope_Rep2 1165.5615173675699 1165.5604299358602 54.455 2 0.15977078873124967 0.0006540935353755587 0.002413957486095259 ['ENSG00000198730|ENST00000361367|CTR9'] 45581 19563 IQTAVRLLL True PC9_epitope_Rep2 1025.6597152872098 1025.65860993586 80.631 2 0.1597699605143874 0.0006540935353755587 0.0024140035917952583 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 78062 18312 NVVDVFHAV True PC9_epitope_Rep4 998.51853035678 998.51742993586 78.505 2 0.15976963187676274 0.0006540935353755587 0.0024140218868460525 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 115239 9754 TREDAGSYTL True PC9_epitope_Rep1 1111.51456717515 1111.51346993586 42.378 2 0.1597574204223044 0.0006540935353755587 0.0024147017890351207 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11'] 84771 5644 QDVDNASLAR True PC9_epitope_Rep3 1087.52580056519 1087.52470993586 26.787 2 0.15975585516553215 0.0006540935353755587 0.0024147889523074497 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 105233 15657 SRIPFNQAL True PC9_epitope_Rep1 1044.5716285588 1044.5705299358601 65.044 2 0.1597438625150642 0.0006540935353755587 0.002415456882244241 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 126010 19651 VLDSEGYLLFY True H1975_Epitope_Rep3 1317.6492697428098 1317.64816993586 82.319 2 0.15973881409283824 0.0006540935353755587 0.0024157381089865908 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 74244 7230 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4596499358599 32.782 2 0.15973809709680054 0.0006540935353755587 0.002415778052524742 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 49788 12686 KHGDIILVV True PC9_epitope_Rep4 992.6018660579199 992.60076993586 56.645 2 0.15972975206031462 0.0006540935353755587 0.0024162429993976543 ['ENSG00000116761|ENST00000370938|CTH', 'nc|ENSG00000116761|P32929-3|CTH'] 104235 13618 SQHGVIIQL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 64.145 2 0.15972938692870456 0.0006540935353755587 0.0024162633448841036 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 141158 7106 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.4183249679301 32.263 1 0.1597284748538932 0.0006540935353755587 0.002416314167322087 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 32919 14980 GHYQNALYL True PC9_epitope_Rep5 1077.5243440132099 1077.5232499358601 62.624 2 0.15972750116632034 0.0006540935353755587 0.0024163684241112686 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 95266 15254 RVPDGMVGL True PC9_epitope_Rep1 942.4956867372199 942.49458993586 63.494 2 0.15971592160753992 0.0006540935353755587 0.0024170137650962884 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 95781 20479 RYIDRIHIFF True PC9_epitope_Rep1 1378.7509899031 1378.74934490379 83.585 3 0.15970458466933396 0.0006540935353755587 0.002417645751316306 ['ENSG00000174231|ENST00000304992|PRPF8'] 71270 22504 LYPSIIQEF True PC9_epitope_Rep1 1108.580461907 1108.57987496793 91.363 1 0.1596998787146405 0.0006540935353755587 0.0024179081367926712 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 21537 21311 ERNDLIVFL True PC9_epitope_Rep2 1117.6131590176099 1117.61206993586 87.436 2 0.15967818274007492 0.0006540935353755587 0.002419118186579587 ['ENSG00000129636|ENST00000320640|ITFG1'] 20824 11078 EQILEEFSK True NCI_RA007_Epitope_Rep2 1121.5604547384098 1121.5593499358602 47.679 2 0.15967200119028985 0.0006540935353755587 0.0024194630608887872 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 2438 11469 AEQIVPLSA True H1975_Epitope_Rep1 926.5072969667399 926.50618993586 49.098 2 0.15966588786299807 0.0006540935353755587 0.0024198041772886363 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 17245 13474 EHAFAVQQL True PC9_epitope_Rep2 1041.5243440132099 1041.5232499358601 57.109 2 0.15966407949861225 0.0006540935353755587 0.0024199050910767555 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 18856 12014 ELDPTNMTY True H1975_Epitope_Rep3 1082.45902644498 1082.4579299358602 51.372 2 0.1596622371616418 0.0006540935353755587 0.0024200079049892078 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 112339 20593 TLADVLYHV True PC9_epitope_Rep5 1029.54949613189 1029.54838993586 84.257 2 0.15965383409712966 0.0006540935353755587 0.002420476903807383 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ENST00000520079.1_1_8:37996261-37996586:+|nuORF'] 63561 15327 LMDHTIPEV True PC9_epitope_Rep2 1053.51648175145 1053.5153899358602 64.236 2 0.15964411427508288 0.0006540935353755587 0.002421019507801621 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 49301 3293 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 17.309 2 0.15964275728305352 0.0006540935353755587 0.00242109527083541 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 21414 14985 ERINNINIL True PC9_epitope_Rep6 1097.61930702721 1097.61820993586 69.653 2 0.15964150114392686 0.0006540935353755587 0.002421165405200558 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 77953 19301 NVLNDLAKV True PC9_epitope_Rep1 984.5603951687599 984.55928993586 79.046 2 0.15963852973884182 0.0006540935353755587 0.002421331316562517 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant'] 3423 18952 [Acetylation]-AGITTIEAVK True PC9_epitope_Rep5 1043.58627587973 1043.5851699358602 77.922 2 0.1596333182612496 0.0006540935353755587 0.0024216223320208305 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 7253 15639 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.5233099358602 68.081 2 0.15963008928870417 0.0006540935353755587 0.0024218026594293863 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 57145 5483 LDTNADKQL True NCI_RA007_Epitope_Rep4 1016.51383889916 1016.51274993586 27.675 2 0.15962961596054698 0.0006540935353755587 0.002421829094364117 ['ENSG00000163220|ENST00000368738|S100A9'] 77789 20237 NTTDIFQTV True PC9_epitope_Rep5 1037.50293986229 1037.50184993586 82.89 2 0.15961598418425268 0.0006540935353755587 0.002422590539970059 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 53900 15261 KTMEDTLMTV True PC9_epitope_Rep6 1167.55154693083 1167.5504499358601 70.811 2 0.15961160948423722 0.0006540935353755587 0.00242283495322193 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 42439 9334 IEDTRYTLP True H1975_Epitope_Rep3 1106.56078909158 1106.5596899358602 40.901 2 0.15961088248057767 0.0006540935353755587 0.002422875573096566 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 40663 12974 HRQEIQVVL True PC9_epitope_Rep3 1120.63529144452 1120.6341899358601 54.933 2 0.15960122515477912 0.0006540935353755587 0.0024234152213685554 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 137521 6458 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 29.814 1 0.15960073620768983 0.0006540935353755587 0.0024234425467672153 ['ENSG00000127184|ENST00000247655|COX7C'] 48750 4832 KDGVVEITGK True NCI_RA007_Epitope_Rep2 1044.5815245361598 1044.5804299358601 23.419 2 0.15959561431726776 0.0006540935353755587 0.0024237288082924065 ['ENSG00000106211|ENST00000248553|HSPB1'] 105424 19165 SRSWLSYSY True PC9_epitope_Rep3 1147.5298233164701 1147.5287299358602 78.938 2 0.15959357441100797 0.0006540935353755587 0.002423842827684111 ['ENSG00000189091|ENST00000302516|SF3B3'] 115936 3962 TSGPTTPLK True NCI_RA007_Epitope_Rep5 900.4916469026 900.49054993586 21.592 2 0.15958766479000752 0.0006540935353755587 0.0024241731727989587 ['ENSG00000188112|ENST00000341865|C6orf132'] 28604 7974 FSHAQTVVL True NCI_RA007_Epitope_Rep3 1000.5341804209199 1000.53308993586 38.467 2 0.15958411017799545 0.0006540935353755587 0.002424371895640073 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 26846 11888 FLDDGHTFNY True H1975_Epitope_Rep1 1227.51965255559 1227.5185499358602 50.728 2 0.15956834000799572 0.0006540935353755587 0.0024252537331953877 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 21793 17153 ERYFISHVL True PC9_epitope_Rep5 1162.61349337078 1162.6123899358602 71.001 2 0.15956605007535446 0.0006540935353755587 0.002425381808449608 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 21493 19461 ERLLGNFSL True PC9_epitope_Rep4 1047.57129420563 1047.57018993586 82.973 2 0.15956324749341827 0.0006540935353755587 0.0024255385652178917 ['ENSG00000151012|ENST00000280612|SLC7A11'] 77661 8979 NTIDPSHPM True PC9_epitope_Rep1 1010.4491304676201 1010.44802993586 39.383 2 0.15955984874515058 0.0006540935353755587 0.0024257286809212532 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 75103 12144 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 52.022 2 0.15955841526669337 0.0006540935353755587 0.002425808869833866 ['ENSG00000171223|ENST00000302754|JUNB'] 9314 6307 AVQQPFINK True NCI_RA007_Epitope_Rep5 1043.5763795860698 1043.5752899358602 30.938 2 0.1595509050020165 0.0006540935353755587 0.0024262290379738045 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 109828 5521 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 26.246 2 0.1595486929847748 0.0006540935353755587 0.0024263528050115692 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 35871 8093 GTMTGMLYK True NCI_RA007_Epitope_Rep3 1000.47217441132 1000.47106993586 38.931 2 0.15954532285370185 0.0006540935353755587 0.0024265413830844027 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 77249 17644 NRYEDALVL True PC9_epitope_Rep1 1091.56112344475 1091.56002993586 72.66 2 0.1595395872910885 0.0006540935353755587 0.0024268623542041475 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 39895 19506 HPFDLGLYNEA True PC9_epitope_Rep2 1274.59315184902 1274.5920499358601 80.412 2 0.15953665205033474 0.0006540935353755587 0.0024270266313000393 ['ENSG00000106399|ENST00000223129|RPA3'] 2497 4181 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 21.19 2 0.1595330193082669 0.0006540935353755587 0.0024272299609405393 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 97432 5059 SEEEGVPST True H1975_Epitope_Rep2 933.39272070697 933.39217496793 24.541 1 0.15953178727955802 0.0006540935353755587 0.0024272989231682936 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 99867 13986 SILPAIFQK True NCI_RA007_Epitope_Rep4 1015.6066170851899 1015.60552993586 61.068 2 0.15952242265473884 0.0006540935353755587 0.0024278231675969614 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 117864 8995 TVYSGEEKL True PC9_epitope_Rep1 1024.5076908895599 1024.5065899358601 39.447 2 0.1595217296127583 0.0006540935353755587 0.0024278619695220958 ['ENSG00000166224|ENST00000373202|SGPL1'] 115250 11900 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.5811499358601 51.098 2 0.1595214263620504 0.0006540935353755587 0.0024278789480696697 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 40981 10947 HTDSLHLLI True H1975_Epitope_Rep3 1047.57129420563 1047.57018993586 47.194 2 0.15951898911411755 0.0006540935353755587 0.0024280154101935974 ['ENSG00000139645|ENST00000267116|ANKRD52'] 93060 8481 RPNDIM[Oxidation]AEV True PC9_epitope_Rep5 1059.50189469691 1059.5007899358602 37.563 2 0.15951709598491212 0.0006540935353755587 0.0024281214122581704 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 115241 9727 TREDAGSYTL True PC9_epitope_Rep5 1111.51456717515 1111.51346993586 42.383 2 0.1595154509063519 0.0006540935353755587 0.0024282135289648253 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11'] 117300 20608 TVMKDILQAV True PC9_epitope_Rep3 1116.6212811731598 1116.62018993586 84.538 2 0.15951522205509722 0.0006540935353755587 0.0024282263438414145 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 47421 22043 IVLPEDLQL True PC9_epitope_Rep2 1038.5961119711399 1038.5950099358602 90.26 2 0.15950631125256212 0.0006540935353755587 0.002428725370390036 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 70847 20430 LYDIILKNF True PC9_epitope_Rep4 1137.64339651673 1137.6422899358602 86.731 2 0.15950362528659975 0.0006540935353755587 0.002428875811081772 ['ENSG00000092010|ENST00000206451|PSME1'] 1937 10866 AEIMKTLEV True H1975_Epitope_Rep2 1032.5525329069999 1032.5514299358601 46.826 2 0.1594940089868684 0.0006540935353755587 0.002429414495387542 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 26828 18070 FLASESLIKQI True PC9_epitope_Rep6 1247.71253870571 1247.7114499358602 82.137 2 0.15949029237657855 0.0006540935353755587 0.0024296227238165898 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 106000 7575 SSVENIQRV True PC9_epitope_Rep3 1030.5407223533398 1030.5396299358601 34.137 2 0.15948837624647885 0.0006540935353755587 0.0024297300847195293 ['ENSG00000173801|ENST00000393931|JUP'] 518 6661 AAPGAEFAPNK True PC9_epitope_Rep4 1071.5349086969097 1071.53380993586 32.795 2 0.15948817396468654 0.0006540935353755587 0.002429741418858877 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 115576 8436 TRSTFSTNY True PC9_epitope_Rep3 1075.49343780775 1075.4923499358601 37.413 2 0.15948398194523158 0.0006540935353755587 0.0024299763156135877 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 31424 10595 GEAEKWAIP True H1975_Epitope_Rep2 999.5025459394698 999.50144993586 45.776 2 0.15947945786513773 0.0006540935353755587 0.0024302298445848564 ['ENSG00000188636|ENST00000341255|RTL6'] 139120 21387 YLDPSVLSGV True PC9_epitope_Rep1 1048.54407639828 1048.5429699358601 87.098 2 0.15947639409935 0.0006540935353755587 0.0024304015526963687 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 41314 6053 HVVFIAQR True NCI_RA007_Epitope_Rep4 968.55558457184 968.55448993586 29.899 2 0.15946424627956976 0.0006540935353755587 0.002431082493958707 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 95617 17913 RYALQLQQI True PC9_epitope_Rep1 1131.64004247179 1131.6389499358602 73.694 2 0.15946237851629896 0.0006540935353755587 0.00243118720759005 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1'] 35260 7592 GRDENSVEL True PC9_epitope_Rep5 1017.4727023631699 1017.47160993586 34.153 2 0.15946032584859016 0.0006540935353755587 0.002431302292834069 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 104168 17244 SQFNKEILL True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 71.346 2 0.15944587887000286 0.0006540935353755587 0.0024321124336705254 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 9607 16736 AYAIIKEEL True PC9_epitope_Rep5 1048.580461907 1048.57936993586 69.382 2 0.1594434107537267 0.0006540935353755587 0.002432250864775855 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 139625 18033 YMDDYIFTY True H1975_Epitope_Rep2 1229.49507760053 1229.49398993586 74.706 2 0.15943935219456065 0.0006540935353755587 0.002432478517360985 ['ENSG00000157483|ENST00000288235|MYO1E'] 38954 19134 HHIPDVITYL True PC9_epitope_Rep2 1206.63970811862 1206.6386099358601 78.969 2 0.15943628158092285 0.0006540935353755587 0.002432650768271342 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 104700 15455 SQVDRLVAL True PC9_epitope_Rep2 999.5712942056298 999.57018993586 64.726 2 0.15942411412505506 0.0006540935353755587 0.002433333440638917 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 21864 11214 ESDEVELSY True H1975_Epitope_Rep2 1069.44515020265 1069.4440499358602 48.176 2 0.15942021097961576 0.0006540935353755587 0.0024335524726708923 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 16263 9986 EEEYPGITA True H1975_Epitope_Rep3 1007.4447562798298 1007.44417496793 43.447 1 0.15941523801417992 0.0006540935353755587 0.0024338315680974888 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 47612 16480 IVWQEDPRL True PC9_epitope_Rep4 1154.6084079903396 1154.60730993586 71.362 2 0.15941401130980007 0.0006540935353755587 0.0024339004187711255 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 118345 9986 TYM[Oxidation]KDLYQL True NCI_RA007_Epitope_Rep5 1189.5689116275698 1189.5678099358602 45.053 2 0.1594039145849334 0.0006540935353755587 0.00243446718689772 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 130171 11125 VSEEIEDIIK True H1975_Epitope_Rep1 1173.6128842340897 1173.61178993586 47.757 2 0.15939757515051126 0.0006540935353755587 0.002434823111158492 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 130192 4025 VSELKEELKK True NCI_RA007_Epitope_Rep2 1201.69180326113 1201.69015490379 20.294 3 0.15939600181680583 0.0006540935353755587 0.0024349114532116693 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'HNRNPU|p.Q207Sfs*132|1|0.2|ENSG00000153187|chr1:244863689-244863689|G/-|frameshift_variant'] 53979 8293 KVADGFKVV True PC9_epitope_Rep4 961.5596668927699 961.55856993586 39.359 2 0.15938827158116292 0.0006540935353755587 0.0024353455493212315 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 105497 6986 SRYSSTETL True PC9_epitope_Rep1 1042.49310345458 1042.49200993586 31.677 2 0.15937831085152107 0.0006540935353755587 0.002435905014123896 ['ENSG00000110237|ENST00000263674|ARHGEF17'] 77077 9745 NRLENDGATAL True PC9_epitope_Rep1 1172.5785644140399 1172.57746993586 42.344 2 0.159372857275565 0.0006540935353755587 0.002436211379762663 ['ENSG00000100401|ENST00000356244|RANGAP1'] 25422 10341 FEDIITKPP True H1975_Epitope_Rep2 1058.56481184286 1058.56370993586 44.785 2 0.15936560478711057 0.0006540935353755587 0.0024366188625468623 ['ENST00000481915.5_1_3:32574447-32611850:-|nuORF', 'ENSG00000144635|ENST00000273130|DYNC1LI1'] 70899 22728 LYEQAFQLL True PC9_epitope_Rep1 1123.5913609438699 1123.59026993586 92.228 2 0.15936557761236717 0.0006540935353755587 0.0024366203894942338 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 128390 17898 VPRPAVLDPAL True PC9_epitope_Rep3 1146.67609362734 1146.6749899358601 74.045 2 0.1593652895958537 0.0006540935353755587 0.0024366365731853723 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 89581 6302 QYNPHVHQL True PC9_epitope_Rep5 1134.55704112382 1134.55540490379 29.216 3 0.1593646762413258 0.0006540935353755587 0.002436671038026048 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 141177 19599 YSVDRLYEL True PC9_epitope_Rep5 1156.5764391557198 1156.57534993586 80.441 2 0.15936365460828655 0.0006540935353755587 0.0024367284454162555 ['ENSG00000084774|ENST00000264705|CAD'] 78644 19935 NYTLVSHLI True PC9_epitope_Rep1 1058.5760452329 1058.57494993586 81.5 2 0.15935717077429165 0.0006540935353755587 0.0024370928151450327 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 74768 16427 NHDFQALAL True PC9_epitope_Rep4 1027.50869394907 1027.50758993586 71.147 2 0.15935316764401944 0.0006540935353755587 0.0024373178048054406 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'PUM1-NKAIN1|2|fusion', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 35145 8327 GQWKKGFVL True NCI_RA007_Epitope_Rep3 1061.6022004110898 1061.6011099358602 39.87 2 0.15934778431152827 0.0006540935353755587 0.002437620399265868 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 54539 6941 KYINTDAKF True NCI_RA007_Epitope_Rep2 1098.5709598524597 1098.5698699358602 31.619 2 0.15934696970740495 0.0006540935353755587 0.002437666191028678 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 40722 6036 HRTDSEIAL True PC9_epitope_Rep4 1040.5250722892 1040.5239699358601 30.202 2 0.15933886348132248 0.0006540935353755587 0.0024381219173104742 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 133757 16104 VYEGPELNHAF True PC9_epitope_Rep2 1274.59315184902 1274.5920499358601 67.201 2 0.1593376252187926 0.0006540935353755587 0.002438191539041321 ['ENSG00000123384|ENST00000243077|LRP1'] 135441 12393 WHSDDEPSL True PC9_epitope_Rep3 1084.44615326216 1084.4450499358602 52.699 2 0.15932638604241325 0.0006540935353755587 0.0024388235563314086 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 108571 11279 SYNPITHQL True PC9_epitope_Rep4 1071.5349086969102 1071.53380993586 51.162 2 0.1593209310039574 0.0006540935353755587 0.0024391303707453666 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 85370 5577 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.4499649679301 26.456 1 0.15932025812708636 0.0006540935353755587 0.0024391682188539977 ['ENSG00000196878|ENST00000356082|LAMB3'] 35399 12930 GSDEPAFM[Oxidation]YY True H1975_Epitope_Rep2 1194.45394144498 1194.45284993586 54.849 2 0.15931965009552737 0.0006540935353755587 0.002439202420035308 ['ENSG00000155096|ENST00000337198|AZIN1'] 73715 19935 MYSDVWKQL True PC9_epitope_Rep5 1168.5586809166 1168.55758993586 81.734 2 0.15931616427491294 0.0006540935353755587 0.002439398503281732 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 126290 7815 VLIAAHGNSLR True PC9_epitope_Rep5 1149.66184054553 1149.66019490379 35.005 3 0.15931555033676928 0.0006540935353755587 0.0024394330399604004 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 137411 5378 YEAPGVREA True NCI_RA007_Epitope_Rep4 990.4770594676198 990.47596993586 27.254 2 0.159310303963943 0.0006540935353755587 0.002439728191059304 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 11667 14003 DGQFSVLFTK True NCI_RA007_Epitope_Rep1 1140.5815245361598 1140.5804299358601 58.495 2 0.15931029821493542 0.0006540935353755587 0.002439728514507246 ['CON__P12763'] 55687 21314 LALFPGVAL True PC9_epitope_Rep6 899.5480395799099 899.5474949679301 94.839 1 0.15930937238117454 0.0006540935353755587 0.002439780603886976 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 1889 6416 AEIEPEAQA True H1975_Epitope_Rep3 956.445090633 956.44454496793 29.655 1 0.1593088372449875 0.0006540935353755587 0.0024398107122952937 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 130995 10231 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.5340749679299 44.297 1 0.15929595766413998 0.0006540935353755587 0.0024405354690656324 ['ENSG00000197081|ENST00000356956|IGF2R'] 48157 11413 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 49.223 3 0.1592781710217248 0.0006540935353755587 0.002441536708290484 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 76973 20807 NRFEDILSL True PC9_epitope_Rep2 1105.5767735088898 1105.57566993586 85.475 2 0.15927362419927457 0.0006540935353755587 0.0024417927221867196 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 84927 10407 QEEANIYAV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 45.044 2 0.15926658266411695 0.0006540935353755587 0.002442189256556688 ['ENST00000478678.5_1_6:32154995-32157692:-|nuORF', 'ENSG00000204304|ENST00000375050|PBX2'] 96122 10616 RYNPENNTW True PC9_epitope_Rep5 1192.52613491836 1192.5250299358602 45.822 2 0.15926480440032695 0.0006540935353755587 0.002442289407205422 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ENST00000494880.5_1_1:185268818-185270317:-|nuORF'] 109602 6132 TEADVNPKAYP True H1975_Epitope_Rep2 1203.5771674317098 1203.57606993586 28.564 2 0.1592601710855068 0.0006540935353755587 0.0024425503717153047 ['ENSG00000100138|ENST00000401959|SNU13'] 10155 7834 AYVHM[Oxidation]VTHF True PC9_epitope_Rep2 1119.5171508382302 1119.51604993586 35.505 2 0.15924994324109243 0.0006540935353755587 0.0024431265382853094 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 134267 19009 VYNEQIRDLL True PC9_epitope_Rep2 1261.6666511424498 1261.66554993586 78.483 2 0.15924406565585922 0.0006540935353755587 0.0024434577025015405 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF'] 24120 14846 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep5 1300.57578791316 1300.57468993586 62.106 2 0.15924318190787154 0.0006540935353755587 0.002443507499906414 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 93464 19605 RQIDQFLVV True PC9_epitope_Rep2 1116.62914343492 1116.6280499358602 80.795 2 0.15924205075391334 0.0006540935353755587 0.0024435712396139644 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 96303 16974 RYSDSTFTF True PC9_epitope_Rep5 1122.49818883502 1122.49708993586 70.309 2 0.15924117780063232 0.0006540935353755587 0.002443620431035023 ['ENSG00000151883|ENST00000281631|PARP8'] 6170 9002 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 39.978 2 0.15924084632425098 0.0006540935353755587 0.0024436391101793726 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 110511 19617 TFITSGMRF True PC9_epitope_Rep1 1058.5219014850597 1058.5208099358601 80.284 2 0.15923737784347902 0.0006540935353755587 0.002443834572333039 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 71136 23614 LYLPSFFTY True PC9_epitope_Rep2 1149.57464825057 1149.57354993586 96.3 2 0.15923468835075674 0.0006540935353755587 0.002443986146276828 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 71428 17579 LYTEKFEEF True PC9_epitope_Rep2 1204.5652057656796 1204.5641099358602 72.895 2 0.15923203892555587 0.0006540935353755587 0.0024441354712803967 ['ENSG00000084652|ENST00000373610|TXLNA'] 38602 14253 HEYPWILSA True NCI_RA007_Epitope_Rep5 1114.54474510462 1114.54364993586 61.517 2 0.15923190776471877 0.0006540935353755587 0.002444142863910102 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 28917 11881 FTDIDGQVY True H1975_Epitope_Rep2 1056.4763907612798 1056.47528993586 50.78 2 0.15922748208650403 0.0006540935353755587 0.0024443923218839553 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 87921 9953 QRLAEPSQL True PC9_epitope_Rep3 1040.56145779792 1040.56036993586 43.239 2 0.15922379228264008 0.0006540935353755587 0.0024446003209639615 ['ENSG00000173801|ENST00000393931|JUP'] 23769 20632 EYGPVYSTW True PC9_epitope_Rep3 1100.48147614172 1100.4803699358602 84.632 2 0.15921339911340238 0.0006540935353755587 0.002445186292533283 ['ENSG00000148158|ENST00000374232|SNX30'] 121556 21183 VFDPKVFTF True PC9_epitope_Rep3 1098.57498260374 1098.57388993586 86.768 2 0.15921330638097092 0.0006540935353755587 0.002445191521460773 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 74751 15977 NHASLISAL True PC9_epitope_Rep1 924.50288029264 924.50178993586 66.265 2 0.15921151213855034 0.0006540935353755587 0.002445292696068015 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 99192 18538 SHLDYDITL True PC9_epitope_Rep2 1075.5185899264302 1075.51748993586 76.656 2 0.15920668582240294 0.0006540935353755587 0.0024455648654551528 ['ENSG00000163960|ENST00000296328|UBXN7'] 86552 10724 QLDNQLDAY True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 46.276 2 0.1592025261440991 0.0006540935353755587 0.0024457994655489837 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 88040 14928 QRQDIAFAY True PC9_epitope_Rep3 1110.5458077337798 1110.54470993586 62.555 2 0.1592007044791299 0.0006540935353755587 0.0024459022120044737 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 76576 16348 NQLEAEIHL True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 70.847 2 0.15919920383033073 0.0006540935353755587 0.0024459868555833236 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 77275 12617 NSDELQELY True H1975_Epitope_Rep2 1109.48768372097 1109.4865899358601 53.629 2 0.15919903680483535 0.0006540935353755587 0.0024459962767797603 ['nc|ENSG00000160209|O00764-2|PDXK', 'PDXK|p.E67A|1|0.21|ENSG00000160209|chr21:43741724-43741724|A/C|missense_variant', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 95218 17300 RVLDELTLA True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 74.547 2 0.1591954566070912 0.0006540935353755587 0.002446198229189959 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 141840 5474 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 28.539 2 0.15919334739892085 0.0006540935353755587 0.0024463172135602983 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 114419 15522 TPTPVPVV True PC9_epitope_Rep5 808.4694549060399 808.46890496793 64.715 1 0.15918854996937243 0.0006540935353755587 0.0024465878670363738 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 4728 14948 ALDENGNLWY True H1975_Epitope_Rep1 1193.53530261973 1193.5342099358602 62.736 2 0.15918253359089138 0.0006540935353755587 0.0024469273314233174 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1'] 26149 14503 FGYQFTQQGPR True PC9_epitope_Rep5 1327.6309343400699 1327.62982993586 60.786 2 0.15918202093771786 0.0006540935353755587 0.0024469562592204755 ['ENSG00000138594|ENST00000308580|TMOD3'] 38400 7529 HEMFPAVHA True H1975_Epitope_Rep3 1037.4752856458097 1037.47418993586 33.943 2 0.15917054936832886 0.0006540935353755587 0.002447603661865177 ['ENSG00000113638|ENST00000337702|TTC33'] 48216 16587 IYPVKYTQTF True PC9_epitope_Rep5 1258.65977485686 1258.6586699358602 68.808 2 0.15915788850168525 0.0006540935353755587 0.0024483183815167393 ['ENSG00000112378|ENST00000421351|PERP'] 118694 12144 TYTDVTPRQF True PC9_epitope_Rep4 1226.59315184902 1226.5920499358601 54.528 2 0.15915720461006116 0.0006540935353755587 0.0024483569938719184 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 24864 17135 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.49657496793 71.159 1 0.1591559540434876 0.0006540935353755587 0.0024484276021296955 ['ENSG00000204592|ENST00000376630|HLA-E'] 87879 15546 QRIDEFEAM True PC9_epitope_Rep3 1137.5124590001699 1137.51136993586 64.946 2 0.15915549352795202 0.0006540935353755587 0.002448453603816337 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 7978 15677 ATDFDVLSY True H1975_Epitope_Rep2 1029.46549172441 1029.46497496793 65.462 1 0.15915398676505332 0.0006540935353755587 0.0024485386807812344 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 12728 17347 DLEEFFSTVGK True NCI_RA007_Epitope_Rep1 1270.60813320682 1270.60702993586 71.609 2 0.15913618523712972 0.0006540935353755587 0.0024495440391304035 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 108128 19955 SYDPTIENTF True PC9_epitope_Rep1 1185.51898384925 1185.51788993586 81.579 2 0.1591324173832685 0.0006540935353755587 0.002449756885132246 ['ENSG00000106615|ENST00000262187|RHEB'] 40156 19736 HQDNNFLYL True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 81.142 2 0.1591255663322132 0.0006540935353755587 0.0024501439482069102 ['XPNPEP3|p.D217*|1|0.36|ENSG00000196236|chr22:40886370-40886371|-/T|frameshift_variant', 'nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 88168 9052 QRVGQAVNL True PC9_epitope_Rep1 983.5512274673898 983.55012993586 39.67 2 0.1591244924553472 0.0006540935353755587 0.0024502046244449594 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 141410 16150 YTELEAIMY True H1975_Epitope_Rep3 1131.5158130451098 1131.51470993586 67.579 2 0.15912376265145228 0.0006540935353755587 0.002450245860713059 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 87764 10464 QRDEKVLEL True PC9_epitope_Rep5 1128.6138872935999 1128.61225490379 45.235 3 0.15912232515674044 0.0006540935353755587 0.002450327085815764 ['ENSG00000135968|ENST00000309863|GCC2'] 112180 10692 TKEVNSGFFY True H1975_Epitope_Rep3 1190.5607890915799 1190.56027496793 46.202 1 0.15912130707873579 0.0006540935353755587 0.0024503846135600464 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 40714 6113 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 28.907 2 0.15910867843097237 0.0006540935353755587 0.0024510983228853774 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 64666 20576 LPVEFTIDA True PC9_epitope_Rep4 1003.52261267771 1003.52207496793 87.298 1 0.1591050716499511 0.0006540935353755587 0.0024513021985863026 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 95685 16198 RYFENPQVI True PC9_epitope_Rep5 1164.5927579262 1164.5916699358602 67.296 2 0.15910311671291505 0.0006540935353755587 0.0024514127097805807 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 88670 11808 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep3 1318.5751192068199 1318.5740299358602 50.566 2 0.15910245181427105 0.0006540935353755587 0.002451450297159616 ['ENSG00000167325|ENST00000300738|RRM1'] 329 19398 AAIEIFEKV True PC9_epitope_Rep5 1018.5698972232999 1018.56880993586 79.66 2 0.1590983180972388 0.0006540935353755587 0.0024516839931881624 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 29923 12649 FVYDEPGHAV True PC9_epitope_Rep5 1132.5189242795998 1132.5178299358602 53.657 2 0.1590962548591877 0.0006540935353755587 0.002451800644844252 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 108719 22643 SYRELFEFF True PC9_epitope_Rep5 1236.5815245361598 1236.5804299358601 92.097 2 0.1590930943360184 0.0006540935353755587 0.0024519793457137133 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 137528 6750 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 30.916 2 0.15908734902820665 0.0006540935353755587 0.0024523042276124994 ['ENSG00000127184|ENST00000247655|COX7C'] 88044 14650 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 61.354 2 0.1590838600638893 0.0006540935353755587 0.002452501540253139 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 46575 10437 ITALDEFATK True H1975_Epitope_Rep1 1107.58119018299 1107.58008993586 45.1 2 0.1590747056079462 0.0006540935353755587 0.0024530193308184576 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 35884 5981 GTMTGM[Oxidation]LYK True NCI_RA007_Epitope_Rep5 1016.46708941132 1016.46598993586 29.689 2 0.1590717312850338 0.0006540935353755587 0.0024531875867367147 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 119764 12154 VAYPGIPKL True H1975_Epitope_Rep2 956.5695033004799 956.56840993586 51.835 2 0.15906934425614425 0.0006540935353755587 0.0024533226280684635 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 114932 9931 TQTAVITRI True PC9_epitope_Rep4 1001.5869442697699 1001.58584993586 45.851 2 0.15906895812997293 0.0006540935353755587 0.0024533444730730596 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 40301 12575 HQNQLLSSL True PC9_epitope_Rep6 1038.5458077337798 1038.54470993586 59.813 2 0.15906760426896696 0.0006540935353755587 0.0024534210690007954 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 139103 8900 YLDKGILKY True H1975_Epitope_Rep1 1111.62774645259 1111.62664993586 39.138 2 0.15906343878778886 0.0006540935353755587 0.0024536567498921386 ['OSBPL3|p.E121Sfs*6|1|0.3|ENSG00000070882|chr7:24870752-24870752|C/-|frameshift_variant', 'nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 54777 13858 KYNDNFFGL True NCI_RA007_Epitope_Rep3 1116.5240096600398 1116.52290993586 61.837 2 0.1590621958029566 0.0006540935353755587 0.0024537270817459426 ['ENSG00000012963|ENST00000013070|UBR7'] 49529 10015 KFIDTTSKF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 43.849 2 0.1590618861082986 0.0006540935353755587 0.002453744605522723 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 141867 15639 YVDPQFLTY True H1975_Epitope_Rep2 1144.54407639828 1144.54357496793 65.311 1 0.15905511918730855 0.0006540935353755587 0.0024541275364863666 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 55223 9222 LADDSVRSL True PC9_epitope_Rep4 974.50327421546 974.50216993586 43.07 2 0.1590544190342768 0.0006540935353755587 0.0024541671606113156 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 131042 10655 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.48110993586 45.941 2 0.1590492276424319 0.0006540935353755587 0.0024544609796793146 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 45248 19811 IPTPIVGV True PC9_epitope_Rep5 794.49019035062 794.4896449679301 81.25 1 0.1590477649604329 0.0006540935353755587 0.002454543769959083 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 74249 6199 NEIGAIEKA True H1975_Epitope_Rep2 943.49746055903 943.49636993586 28.816 2 0.1590457213952314 0.0006540935353755587 0.002454659443881409 ['ENSG00000165678|ENST00000372134|GHITM'] 9497 6853 AVVTQVNKV True PC9_epitope_Rep1 956.5654805492 956.56438993586 31.165 2 0.1590429278794818 0.0006540935353755587 0.0024548175767942866 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 73718 19419 MYSFVNDKF True PC9_epitope_Rep3 1149.5164817514499 1149.5153899358602 79.92 2 0.15904257484288017 0.0006540935353755587 0.002454837561907457 ['ENSG00000163874|ENST00000373087|ZC3H12A', 'ZC3H12B|p.V574Gfs*7|1|0.22|ENSG00000102053|chrX:65502412-65502413|-/G|frameshift_variant', 'nc|ENSG00000102053|Q5HYM0-2|ZC3H12B', 'ENSG00000102053|ENST00000338957|ZC3H12B', 'ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 29335 19027 FVDEYDPTI True PC9_epitope_Rep4 1097.49170647225 1097.4906099358602 81.277 2 0.15904121603655957 0.0006540935353755587 0.002454914484337381 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 95364 14753 RVVDYLTKL True PC9_epitope_Rep6 1105.64954452633 1105.64844993586 68.697 2 0.15903089975344004 0.0006540935353755587 0.0024554985706917018 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 6932 15916 AQIKEMVEL True PC9_epitope_Rep5 1059.56343194387 1059.5623299358601 66.213 2 0.15902534904961882 0.0006540935353755587 0.002455812897331157 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 135105 12357 WEEEFIERC True H1975_Epitope_Rep3 1239.5230236838697 1239.52192993586 52.718 2 0.15901797689699304 0.0006540935353755587 0.002456230431538082 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 44073 22718 IILPEDIEL True PC9_epitope_Rep1 1053.59577761797 1053.59468993586 92.189 2 0.15901193423670118 0.0006540935353755587 0.002456572720575986 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 114578 16147 TQDGNIYQL True PC9_epitope_Rep4 1050.4981888350198 1050.49708993586 70.048 2 0.15901007218469942 0.0006540935353755587 0.002456678206894576 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 27979 20962 FQIIQSIRMGM True PC9_epitope_Rep5 1322.6838985130598 1322.6828099358602 85.69 2 0.15900836896559734 0.0006540935353755587 0.0024567746991981266 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 114928 11071 TQTAVITRI True PC9_epitope_Rep3 1001.5869442697699 1001.58584993586 47.585 2 0.15900777864818483 0.0006540935353755587 0.0024568081432751916 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 38819 14739 HHALPITDL True PC9_epitope_Rep3 1015.54507945779 1015.5439899358599 61.832 2 0.15900427160596056 0.0006540935353755587 0.002457006842009838 ['ENSG00000065268|ENST00000585809|WDR18'] 111280 11333 THLLNQDTL True PC9_epitope_Rep4 1053.54547338061 1053.54436993586 51.371 2 0.15900148011607848 0.0006540935353755587 0.0024571650111137916 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 77205 18632 NRSQIYFTL True PC9_epitope_Rep2 1140.5927579262 1140.5916699358602 77.033 2 0.15899749661338608 0.0006540935353755587 0.002457390738671647 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3', 'nc|ENSG00000175556|Q496Y0-2|LONRF3'] 115408 19484 TRLPEFSEL True PC9_epitope_Rep1 1090.56587447202 1090.56476993586 79.764 2 0.15899081086576847 0.0006540935353755587 0.002457769637085652 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 90137 6081 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 28.366 2 0.1589898464463826 0.0006540935353755587 0.0024578242980119775 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 35820 4556 GTLASVYHK True NCI_RA007_Epitope_Rep4 974.5185303567802 974.51742993586 23.928 2 0.15898564009263033 0.0006540935353755587 0.0024580627180214826 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 140779 4000 YSDHPSGGSY True H1975_Epitope_Rep2 1068.41485313388 1068.41374993586 20.457 2 0.15898214960198964 0.0006540935353755587 0.0024582605797802627 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant'] 14945 11094 DYETATLSEIK True NCI_RA007_Epitope_Rep2 1268.61361251008 1268.61250993586 47.734 2 0.15898166857782203 0.0006540935353755587 0.002458287848336195 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 76142 19962 NMVDIIHSV True PC9_epitope_Rep1 1026.51681610462 1026.51570993586 81.608 2 0.15897901719386334 0.0006540935353755587 0.002458438156831638 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 44997 15391 IPAYLAETL True H1975_Epitope_Rep3 989.5433481222899 989.54279496793 64.612 1 0.15897838344736534 0.0006540935353755587 0.002458474085647134 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 96716 20350 SALPDIKVLTL True PC9_epitope_Rep4 1168.7067250492798 1168.70562993586 86.418 2 0.15897441435852935 0.0006540935353755587 0.0024586991160296346 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 39130 16682 HHYELPAIL True PC9_epitope_Rep4 1091.5763795860698 1091.5752899358602 72.142 2 0.15897317872352115 0.0006540935353755587 0.0024587691754538983 ['ENST00000592618.5_1_19:1010351-1011343:-|nuORF', 'ENSG00000182087|ENST00000356663|TMEM259'] 21285 16041 ERDYTGYVL True PC9_epitope_Rep1 1114.5294889632999 1114.52838993586 66.516 2 0.15897107479173778 0.0006540935353755587 0.002458888471132026 ['ENSG00000116138|ENST00000375847|DNAJC16', 'nc|ENSG00000116138|Q9Y2G8-2|DNAJC16', 'ENST00000475133.5_1_1:15892828-15894669:+|nuORF'] 66166 10336 LSEPSSLQY True H1975_Epitope_Rep3 1022.49204082542 1022.49147496793 44.809 1 0.15896980679612263 0.0006540935353755587 0.002458960370929216 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 24792 8836 FATHAAALSVR True PC9_epitope_Rep1 1142.6196413803798 1142.61799490379 38.83 3 0.15896843404082953 0.0006540935353755587 0.002459038213333791 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 88201 19099 QRYNSFISL True PC9_epitope_Rep5 1126.5771078620598 1126.5760099358602 78.494 2 0.15896562999424324 0.0006540935353755587 0.0024591972250857233 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 132922 14359 VVMQEGLAHI True PC9_epitope_Rep4 1095.5746653339097 1095.5735699358602 63.139 2 0.15896062854167156 0.0006540935353755587 0.0024594808727267195 ['ENSG00000152684|ENST00000274311|PELO'] 53000 12529 KPHAPIISI True PC9_epitope_Rep5 974.5913013742199 974.59020993586 53.192 2 0.1589585171388356 0.0006540935353755587 0.0024596006266311534 ['ENSG00000137962|ENST00000260526|ARHGAP29'] 22310 13291 ETDLLDIRSEY True H1975_Epitope_Rep1 1352.64597526752 1352.6454749679299 56.227 1 0.15895241476359537 0.0006540935353755587 0.0024599467720238283 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 53388 19129 KQVEEIFNL True PC9_epitope_Rep2 1118.5971746003 1118.5966749679299 78.95 1 0.15894822186587054 0.0006540935353755587 0.002460184634198725 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 101802 14252 SLPEELNRV True PC9_epitope_Rep1 1055.56112344475 1055.56002993586 59.645 2 0.1589470883682142 0.0006540935353755587 0.0024602489412168106 ['ENSG00000137815|ENST00000389629|RTF1'] 28885 12865 FTDEEVDEMY True H1975_Epitope_Rep2 1276.4805497352 1276.4794499358602 54.598 2 0.15894552228157066 0.0006540935353755587 0.00246033779317988 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 137461 13744 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.47002496793 58.164 1 0.1589435969339376 0.0006540935353755587 0.0024604470322142132 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 8848 7215 AVFDGAQVTSK True NCI_RA007_Epitope_Rep2 1121.57168812845 1121.5705899358602 32.684 2 0.15894089748820198 0.0006540935353755587 0.002460600199642314 ['ENSG00000175274|ENST00000525680|TP53I11'] 5011 20179 ALIDRMVNL True PC9_epitope_Rep1 1043.57975071435 1043.57864993586 82.447 2 0.15893654394735818 0.0006540935353755587 0.0024608472410210963 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 24223 7097 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56899490379 32.108 3 0.15893291427641226 0.0006540935353755587 0.002461053225380758 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 140852 16515 YSDSFPMEL True H1975_Epitope_Rep2 1087.45321278855 1087.45210993586 68.746 2 0.15893222412306515 0.0006540935353755587 0.002461092393632344 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 31859 5160 GELEAVKQA True NCI_RA007_Epitope_Rep4 943.49746055903 943.49636993586 26.373 2 0.15892925075037032 0.0006540935353755587 0.0024612611484777958 ['ENST00000514613.5_1_17:49067015-49156972:-|nuORF', 'nc|ENSG00000008294|O60271-5|SPAG9', 'nc|ENSG00000008294|O60271-3|SPAG9', 'nc|ENSG00000008294|O60271-9|SPAG9', 'nc|ENSG00000008294|O60271-4|SPAG9', 'nc|ENSG00000008294|O60271-2|SPAG9', 'ENSG00000008294|ENST00000262013|SPAG9'] 42614 7483 IEGQGVFREA True NCI_RA007_Epitope_Rep3 1104.55637241748 1104.55526993586 36.556 2 0.15892905368496282 0.0006540935353755587 0.0024612723334046585 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 77643 18876 NTFTKLITV True PC9_epitope_Rep2 1035.59644632431 1035.5953499358602 77.971 2 0.1589225406790107 0.0006540935353755587 0.002461642023465579 ['ENSG00000106615|ENST00000262187|RHEB'] 68112 5856 LTDPEAAKY True H1975_Epitope_Rep2 1006.4971262058598 1006.49602993586 27.513 2 0.15892232193601397 0.0006540935353755587 0.0024616544406780272 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000459805.5_1_1:155184905-155186549:-|nuORF', 'chr1:155236469-155237344|112|11.08|0.59|4.23|-|0|GBA1,None|1'] 33395 13593 GLADASLLKKV True PC9_epitope_Rep4 1113.6757592741699 1113.67466993586 60.178 2 0.15892061746836536 0.0006540935353755587 0.0024617511990007775 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 96354 20311 RYSVFFQSL True PC9_epitope_Rep2 1145.58694426977 1145.58584993586 83.55 2 0.15891846902522377 0.0006540935353755587 0.002461873166100218 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 98796 19855 SGLLKVWQV True PC9_epitope_Rep2 1028.6018660579198 1028.6007699358602 81.764 2 0.15891621409816414 0.0006540935353755587 0.0024620011847798526 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 88203 14764 QRYPGQVIL True PC9_epitope_Rep5 1072.6029286870798 1072.60182993586 61.789 2 0.15891216222853854 0.0006540935353755587 0.0024622312377467303 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 101351 21676 SLITLIEKV True PC9_epitope_Rep1 1014.6324974798599 1014.63140993586 88.207 2 0.15891177243206248 0.0006540935353755587 0.0024622533703495095 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'CPD|p.R370H|1|0.26|ENSG00000108582|chr17:30420955-30420955|G/A|missense_variant'] 6832 18085 AQFEHTILL True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 74.866 2 0.15891018089434217 0.0006540935353755587 0.00246234373975446 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 115580 6986 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 34.116 2 0.15889956539507358 0.0006540935353755587 0.002462946585138554 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 6429 20764 APRTVLLLLSA True PC9_epitope_Rep2 1152.7230438197598 1152.72194993586 85.311 2 0.1588935737933644 0.0006540935353755587 0.0024632869082753216 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 107087 12051 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 51.213 2 0.15888614026804107 0.0006540935353755587 0.0024637091979687214 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 46603 11884 ITDDLHFY True H1975_Epitope_Rep2 1022.47091145802 1022.4698099358601 50.792 2 0.1588840440432865 0.0006540935353755587 0.00246382829505707 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 48556 19050 KAMDDTFYL True PC9_epitope_Rep5 1102.50049733414 1102.49940993586 78.304 2 0.1588777715127472 0.0006540935353755587 0.0024641847034494587 ['ENSG00000167136|ENST00000372642|ENDOG'] 90418 11421 REIFFPETA True H1975_Epitope_Rep3 1108.5553097883198 1108.5542099358602 49.047 2 0.15886122398879826 0.0006540935353755587 0.0024651251892501415 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 39754 15546 HLVPEVPTV True PC9_epitope_Rep4 989.55458151233 989.55348993586 67.721 2 0.1588610912123262 0.0006540935353755587 0.002465132737108424 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 17894 14382 EHYYNAISV True PC9_epitope_Rep3 1094.50327421546 1094.5021699358601 60.413 2 0.1588565603562715 0.0006540935353755587 0.002465390313581541 ['ENSG00000198730|ENST00000361367|CTR9'] 108178 19785 SYGDILHVI True PC9_epitope_Rep4 1015.53384606775 1015.5332749679301 84.23 1 0.15885580910318123 0.0006540935353755587 0.0024654330244700054 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 24617 17025 FAIPLIERL True H1975_Epitope_Rep2 1070.64881625034 1070.6477099358601 70.742 2 0.15885385657095338 0.0006540935353755587 0.002465544034970873 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 1278 4853 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 23.754 2 0.1588412668712468 0.0006540935353755587 0.0024662599375466594 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 128958 21718 VQIPFFAKL True PC9_epitope_Rep1 1061.62735252977 1061.6262499358602 88.371 2 0.15884101594102137 0.0006540935353755587 0.00246627420858993 ['ENSG00000188641|ENST00000370192|DPYD'] 116881 16022 TVFDEAIRA True PC9_epitope_Rep3 1020.5240096600398 1020.52290993586 66.778 2 0.15884043589641528 0.0006540935353755587 0.0024663071975247718 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 103967 17013 SQANRLFYL True PC9_epitope_Rep6 1110.5821932425 1110.58108993586 77.991 2 0.15884025962130535 0.0006540935353755587 0.0024663172229239974 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 30161 19662 FYPPKVELF True PC9_epitope_Rep4 1138.60628273202 1138.6051899358602 83.748 2 0.1588269546778329 0.0006540935353755587 0.0024670740403327403 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 74777 17052 NHDFTPLEI True PC9_epitope_Rep6 1084.5189242796 1084.5178299358602 78.155 2 0.15881797782097273 0.0006540935353755587 0.002467584796679158 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 90614 5697 REMPVKVEA True NCI_RA007_Epitope_Rep2 1057.5590152697698 1057.5579099358602 26.775 2 0.1588142258039289 0.0006540935353755587 0.002467798306525628 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 13273 20368 DLTDYLMK True PC9_epitope_Rep1 997.47903361357 997.47792993586 83.17 2 0.15881366770645808 0.0006540935353755587 0.0024678300668337684 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 24624 22966 FAISILQQL True PC9_epitope_Rep3 1031.60153170475 1031.6004299358601 93.604 2 0.15881317708560036 0.0006540935353755587 0.002467857987508107 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 2774 8454 AETSPAPIP True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 37.471 1 0.15880400057323132 0.0006540935353755587 0.002468380270495111 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 5801 8858 APEEHPVLL True H1975_Epitope_Rep3 1003.5338460677498 1003.53274993586 39.078 2 0.15879871762411876 0.0006540935353755587 0.0024686810006223654 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 109739 4973 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 24.214 2 0.1587970534660136 0.0006540935353755587 0.002468775739846801 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 106996 5557 SVETLKEM[Oxidation]IK True NCI_RA007_Epitope_Rep5 1192.63732554056 1192.63567490379 28.061 3 0.15879241506946887 0.0006540935353755587 0.0024690398193067307 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 115246 12625 TREEGTPLTL True PC9_epitope_Rep1 1115.5822528121498 1115.5811499358601 53.432 2 0.15878380574657502 0.0006540935353755587 0.0024695300516648765 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 77817 15080 NVDAILEEY True H1975_Epitope_Rep2 1064.50260550912 1064.50207496793 63.156 1 0.1587833037321007 0.0006540935353755587 0.0024695586403884412 ['ENSG00000123562|ENST00000441076|MORF4L2'] 98355 6066 SEYLQQHVA True NCI_RA007_Epitope_Rep4 1073.51417325233 1073.5130699358601 29.948 2 0.15878051945145813 0.0006540935353755587 0.002469717205618915 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 140204 12311 YQVDSRTYL True PC9_epitope_Rep4 1143.5560380643099 1143.5549499358601 55.166 2 0.15877430182838836 0.0006540935353755587 0.00247007133694694 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000513152.1_1_5:40764586-40764871:-|nuORF'] 78532 13538 NYPQSVPRL True PC9_epitope_Rep1 1072.56654317836 1072.5654499358602 56.93 2 0.1587707805744343 0.0006540935353755587 0.0024702719161916907 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 93593 6269 RQNVAVNEL True NCI_RA007_Epitope_Rep5 1041.55670677065 1041.55560993586 30.793 2 0.1587705509284125 0.0006540935353755587 0.0024702849979560473 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 69665 12002 LVDSYVAIINK True NCI_RA007_Epitope_Rep1 1233.69688864157 1233.6957899358601 50.673 2 0.15876372184829252 0.0006540935353755587 0.0024706740474830908 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000593203.1_1_19:10934344-10943016:+|nuORF'] 1590 5258 AEFAERSVA True NCI_RA007_Epitope_Rep3 978.4770594676199 978.47596993586 27.687 2 0.15876168066581933 0.0006540935353755587 0.0024707903445757777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 23821 19279 EYIKFLRSI True PC9_epitope_Rep1 1167.6651945904698 1167.66355490379 78.959 3 0.15875926867743834 0.0006540935353755587 0.002470927775510705 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 128424 7697 VPRQPTVTSV True PC9_epitope_Rep4 1082.60840799034 1082.60730993586 36.991 2 0.1587476228784099 0.0006540935353755587 0.002471591440426094 ['ENSG00000163110|ENST00000317968|PDLIM5'] 90124 4520 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 24.637 2 0.15874474970280802 0.0006540935353755587 0.0024717552028732225 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 715 15758 AAVEWFDGK True PC9_epitope_Rep5 1021.4868958753298 1021.48578993586 65.609 2 0.15874179974775537 0.0006540935353755587 0.0024719233527909397 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 49908 19108 KIIGAVDQIQL True PC9_epitope_Rep2 1196.71287305888 1196.71176993586 78.87 2 0.1587393976935001 0.0006540935353755587 0.00247206028033804 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 75129 14740 NHYNMQYAL True PC9_epitope_Rep3 1152.50222866964 1152.50112993586 61.835 2 0.15873589825967876 0.0006540935353755587 0.0024722597768482937 ['ENSG00000241945|ENST00000291576|PWP2'] 113741 7784 TMDNPTTTQY True H1975_Epitope_Rep1 1170.48630382198 1170.4852099358602 34.896 2 0.15873051273437955 0.0006540935353755587 0.0024725668274875635 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 27673 6160 FPGYDSESK True H1975_Epitope_Rep3 1028.4450906329998 1028.4439899358601 28.707 2 0.15872909053361406 0.0006540935353755587 0.0024726479192755174 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF', 'ENST00000444235.1_1_2:174736655-174736751:-|nuORF', 'ENST00000494197.1_1_5:31847735-31848014:+|nuORF', 'ENSG00000122406|ENST00000370321|RPL5'] 90087 7323 REAEIYQTV True H1975_Epitope_Rep3 1107.5560380643099 1107.5549499358601 33.142 2 0.15872083120950664 0.0006540935353755587 0.002473118906228373 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ACVR1C|p.W232L|1|0.29|ENSG00000123612|chr2:157550242-157550242|C/A|missense_variant', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 54796 10199 KYPDAVATW True NCI_RA007_Epitope_Rep4 1049.51819600361 1049.5170899358602 46.085 2 0.15871689040365117 0.0006540935353755587 0.002473343661764022 ['CON__P31096', 'ENST00000505146.1_1_4:88898047-88901296:+|nuORF', 'ENST00000508002.5_1_4:88896921-88901631:+|nuORF', 'nc|ENSG00000118785|P10451-4|SPP1', 'nc|ENSG00000118785|P10451-5|SPP1', 'ENSG00000118785|ENST00000395080|SPP1', 'ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 53791 13202 KTDDLTMVLY True H1975_Epitope_Rep1 1197.59512599497 1197.5940299358601 55.878 2 0.15871384086460988 0.0006540935353755587 0.0024735175997753823 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 68379 8011 LTEQYNEQY True H1975_Epitope_Rep1 1186.51423282198 1186.5131299358602 35.758 2 0.15871237095693952 0.0006540935353755587 0.0024736014439612503 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 106163 7324 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4554749679298 33.113 1 0.15870979148125527 0.0006540935353755587 0.002473748585257453 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 23913 14234 EYLDDRNTF True PC9_epitope_Rep3 1171.51456717515 1171.51346993586 59.837 2 0.15870957609148648 0.0006540935353755587 0.00247376087215342 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.H214R|1|0.61|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant'] 35832 11626 GTLEQWIEK True NCI_RA007_Epitope_Rep4 1102.56587447202 1102.56476993586 51.672 2 0.15870905452355738 0.0006540935353755587 0.002473790625215893 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 7950 7162 ATATANQIILK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 34.222 2 0.15870826086950812 0.0006540935353755587 0.0024738359002312634 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 8316 7904 ATINNPNLLTK True NCI_RA007_Epitope_Rep4 1197.67173652289 1197.67062993586 37.139 2 0.15870469452836264 0.0006540935353755587 0.0024740393569566833 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 17700 7591 EHNDLQYAA True PC9_epitope_Rep3 1059.46213767947 1059.46104993586 34.196 2 0.15870409492669607 0.0006540935353755587 0.002474073565361538 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 105994 8292 SSVATITRL True H1975_Epitope_Rep2 946.54474510462 946.54364993586 36.846 2 0.158703907611819 0.0006540935353755587 0.002474084252125015 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 132876 21479 VVLPLELKL True PC9_epitope_Rep3 1022.6739683690199 1022.6728699358599 87.91 2 0.1587038858540674 0.0006540935353755587 0.0024740854934599695 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 113747 6076 TM[Oxidation]DNPTTTQY True H1975_Epitope_Rep3 1186.48121882198 1186.48012993586 28.384 2 0.15869883027915138 0.0006540935353755587 0.0024743739436994066 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 105161 10630 SRFPQGAQL True PC9_epitope_Rep2 1002.5246783663797 1002.52358993586 46.201 2 0.1586950924931153 0.0006540935353755587 0.0024745872279313564 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 26277 19457 FHFTTPAL True PC9_epitope_Rep5 932.4756029156399 932.4745099358599 79.893 2 0.15869417706662464 0.0006540935353755587 0.002474639466473671 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 781 11868 AAVTSLFAK True PC9_epitope_Rep6 906.5174677276199 906.51636993586 56.867 2 0.158694125309228 0.0006540935353755587 0.0024746424200271073 ['CON__Q3SX09'] 115165 20124 TRDPLVLEL True PC9_epitope_Rep1 1054.60225998074 1054.60116993586 82.237 2 0.15869411980038758 0.0006540935353755587 0.002474642734391163 ['FKBP11|p.I85L|1|0.28|ENSG00000134285|chr12:48924591-48924591|T/A|missense_variant'] 104052 4078 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 21.967 2 0.15867492814222875 0.0006540935353755587 0.002475738155652697 ['ENSG00000130935|ENST00000253247|NOL11'] 78289 18037 NYIKDLNIL True PC9_epitope_Rep6 1104.61791004488 1104.6168099358601 82.01 2 0.15867461154540533 0.0006540935353755587 0.002475756230421017 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 65112 22558 LQMEQLNGILL True PC9_epitope_Rep2 1270.69550874258 1270.6944099358602 92.262 2 0.15867337882501056 0.0006540935353755587 0.0024758266086789475 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000504966.2_1_4:145493783-145493942:+|nuORF', 'ENST00000510488.1_1_3:141189685-141190057:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 69875 19205 LVIDAVREI True PC9_epitope_Rep5 1026.6073453611798 1026.6062499358602 78.911 2 0.15867200722279348 0.0006540935353755587 0.0024759049183011844 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 26902 19632 FLDGNELTL True PC9_epitope_Rep6 1020.51277627 1020.51166993586 88.174 2 0.15867160354103063 0.0006540935353755587 0.0024759279663919137 ['ENSG00000213719|ENST00000375784|CLIC1'] 56277 5931 LDADPSLQR True H1975_Epitope_Rep3 1013.51417325233 1013.51306993586 27.822 2 0.15866958278048002 0.0006540935353755587 0.002476043344337096 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 109836 12209 TEELAYLK True PC9_epitope_Rep3 965.50696261357 965.50586993586 51.993 2 0.15866679793324562 0.0006540935353755587 0.0024762023575985027 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 55447 13026 LAFNGDLAKA True PC9_epitope_Rep4 1018.5447451046199 1018.54364993586 57.999 2 0.15866411870869046 0.0006540935353755587 0.002476355349484597 ['ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF', 'TNKS1BP1|p.P738Hfs*87|1|0.22|ENSG00000149115|chr11:57310498-57310498|G/-|frameshift_variant'] 129090 13139 VQPSLFYHL True NCI_RA007_Epitope_Rep3 1102.58113061334 1102.58002993586 58.958 2 0.1586621153068561 0.0006540935353755587 0.0024764697560003854 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 53059 12568 KPNPNQIISV True PC9_epitope_Rep5 1108.62405805448 1108.62296993586 53.342 2 0.15865910412046308 0.0006540935353755587 0.002476641723113186 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 134757 20174 VYTSVVEEL True PC9_epitope_Rep3 1037.5280919809697 1037.52698993586 82.855 2 0.1586514421592926 0.0006540935353755587 0.0024770793470444714 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 106558 7524 STMGYMMAK True NCI_RA007_Epitope_Rep4 1018.4285953471799 1018.42748993586 35.586 2 0.15864601104105533 0.0006540935353755587 0.0024773895999279107 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 8938 11564 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6965849037902 55.588 3 0.15864092698875917 0.0006540935353755587 0.0024776800618075802 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 47992 20388 IYKPVTDFF True PC9_epitope_Rep1 1128.5855472874398 1128.5844499358602 83.245 2 0.15863717999851532 0.0006540935353755587 0.0024778941564714287 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000472420.5_1_2:44123526-44126707:-|nuORF'] 103410 8494 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 37.507 2 0.15863545076886468 0.0006540935353755587 0.0024779929670244233 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 141375 8770 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43407496793 38.664 1 0.15862964244693536 0.0006540935353755587 0.002478324891299986 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 113502 13047 TLTEEGVIKV True PC9_epitope_Rep6 1087.6124903112698 1087.6113899358602 61.783 2 0.1586279186083446 0.0006540935353755587 0.0024784234108883216 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 89543 18417 QYLQDAYSF True PC9_epitope_Rep6 1133.5029398622898 1133.50184993586 83.486 2 0.15861842860842293 0.0006540935353755587 0.002478965846579069 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 6363 4365 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 23.232 2 0.15860959536640706 0.0006540935353755587 0.002479470849366435 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 101316 22723 SLINVGLISV True PC9_epitope_Rep2 1013.6120963884499 1013.61098993586 92.9 2 0.1586069257193962 0.0006540935353755587 0.002479623495211997 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 85854 18539 QHFDPVIQL True PC9_epitope_Rep4 1095.5712942056298 1095.57018993586 79.385 2 0.1586017128829731 0.0006540935353755587 0.0024799215833190454 ['ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 118921 5325 VADPETRTV True PC9_epitope_Rep5 986.50327421546 986.50216993586 25.495 2 0.1586000192271434 0.0006540935353755587 0.002480018440146217 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 75131 14529 NHYNMQYAL True PC9_epitope_Rep5 1152.50222866964 1152.50112993586 60.884 2 0.15859917936239584 0.0006540935353755587 0.0024800664717507174 ['ENSG00000241945|ENST00000291576|PWP2'] 89500 21558 QYILFPLRF True PC9_epitope_Rep4 1195.67536535135 1195.6742699358601 91.103 2 0.15859884343015063 0.0006540935353755587 0.0024800856838716736 ['ENSG00000101407|ENST00000373447|TTI1'] 29728 11099 FVNDIFER True H1975_Epitope_Rep3 1038.5134449763398 1038.5123499358601 47.785 2 0.15859822847448724 0.0006540935353755587 0.0024801208538563105 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 8852 6654 AVFDGAQVTSK True NCI_RA007_Epitope_Rep5 1121.57168812845 1121.5705899358602 32.264 2 0.15859458802804421 0.0006540935353755587 0.0024803290651545314 ['ENSG00000175274|ENST00000525680|TP53I11'] 98938 19257 SHAINVLVL True PC9_epitope_Rep5 964.57056592964 964.56946993586 79.113 2 0.1585936571248773 0.0006540935353755587 0.0024803823099306625 ['ENST00000274242.9_2_5:40832528-40832603:-|nuORF'] 141843 5446 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 27.528 2 0.1585927226511906 0.0006540935353755587 0.0024804357600770985 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 76050 12314 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 52.45 2 0.15859148992693198 0.0006540935353755587 0.002480506271357123 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 53310 20694 KQLEDILVL True PC9_epitope_Rep5 1069.63831113629 1069.63720993586 84.655 2 0.1585894666021257 0.0006540935353755587 0.002480622008974919 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 77143 5043 NRPGTVSSL True PC9_epitope_Rep4 929.49304388493 929.49194993586 26.028 2 0.15858644910775888 0.0006540935353755587 0.0024807946247965684 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 110195 6945 TEQEVAQVASA True H1975_Epitope_Rep2 1131.54078192299 1131.53968993586 31.633 2 0.15858227163978317 0.0006540935353755587 0.002481033616722211 ['ENSG00000196878|ENST00000356082|LAMB3'] 17583 21505 EHIGIGLLSL True PC9_epitope_Rep2 1050.60734536118 1050.6062499358602 88.187 2 0.15858002039569977 0.0006540935353755587 0.002481162419378754 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 7148 5451 AQYEDIANR True NCI_RA007_Epitope_Rep5 1078.5043368446197 1078.5032299358602 27.654 2 0.15857944053599576 0.0006540935353755587 0.0024811955965472134 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 49522 7318 KFIDTTSKF True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 34.826 2 0.15857637659491186 0.0006540935353755587 0.0024813709099073115 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 7543 13316 ASEDSVLLY True H1975_Epitope_Rep2 995.4811417885501 995.4805949679301 56.35 1 0.158573905483031 0.0006540935353755587 0.002481512311623845 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 75758 18828 NLLPKLHIV True PC9_epitope_Rep5 1045.66480066765 1045.6637099358602 77.437 2 0.15857290839382207 0.0006540935353755587 0.0024815693692403994 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 34663 14340 GQDEPLIHV True PC9_epitope_Rep3 1006.5083595958998 1006.50726993586 60.244 2 0.1585684811027448 0.0006540935353755587 0.002481822733179384 ['ENSG00000157778|ENST00000288607|PSMG3'] 401 5254 AALEDKNSL True NCI_RA007_Epitope_Rep5 959.49237517859 959.49126993586 26.906 2 0.15855844461759144 0.0006540935353755587 0.0024823971943468363 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1'] 74680 11305 NGQDLGVAFK True PC9_epitope_Rep2 1047.5349086969097 1047.53380993586 48.807 2 0.1585543320878802 0.0006540935353755587 0.0024826326227230145 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 75283 19748 NIIPRFVQV True PC9_epitope_Rep2 1084.6393141958001 1084.63820993586 81.351 2 0.15854761174192908 0.0006540935353755587 0.0024830173877068524 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 141663 14588 YTTDDIEFY True H1975_Epitope_Rep2 1165.48153571137 1165.48042993586 61.269 2 0.15854348434671228 0.0006540935353755587 0.0024832537260540124 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3', 'nc|ENSG00000145864|P47870-3|GABRB2', 'nc|ENSG00000145864|P47870-4|GABRB2', 'nc|ENSG00000166206|P28472-4|GABRB3', 'nc|ENSG00000145864|P47870-1|GABRB2', 'ENSG00000163288|ENST00000295454|GABRB1', 'ENSG00000145864|ENST00000393959|GABRB2', 'GABRB2|p.R193L|1|0.2|ENSG00000145864|chr5:161336733-161336733|C/A|missense_variant'] 89635 22428 QYSPLLAAF True PC9_epitope_Rep3 1008.5280324113198 1008.52692993586 91.546 2 0.1585354678830029 0.0006540935353755587 0.002483712820114643 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 24087 18350 EYPDRIMNTF True PC9_epitope_Rep2 1284.5808729131597 1284.5797699358602 75.914 2 0.15852321028382946 0.0006540935353755587 0.002484414963173697 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 108754 20289 SYSHIMALI True PC9_epitope_Rep5 1033.52665251233 1033.52554993586 83.091 2 0.15851641972206817 0.0006540935353755587 0.0024848040272320328 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 138152 20501 YGLPVVVKL True PC9_epitope_Rep1 986.6164534929 986.61534993586 83.669 2 0.15851543237434226 0.0006540935353755587 0.0024848606022133666 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 73300 19450 M[Oxidation]TDPIRILV True PC9_epitope_Rep1 1072.5950668057599 1072.59396993586 79.629 2 0.1585132379315018 0.0006540935353755587 0.0024849863482968863 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 8126 8844 ATEESDLAQQY True H1975_Epitope_Rep3 1253.54117584581 1253.5400699358602 39.024 2 0.1585107407236029 0.0006540935353755587 0.0024851294511679506 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 130429 7501 VSMDYAISK True NCI_RA007_Epitope_Rep3 1012.4899326504399 1012.4888299358599 36.627 2 0.1585053480091963 0.0006540935353755587 0.0024854385095371525 ['ENSG00000196453|ENST00000247930|ZNF777'] 85231 6595 QEQEGGPAVP True H1975_Epitope_Rep2 1010.4668887067396 1010.46578993586 30.278 2 0.1584995018334692 0.0006540935353755587 0.0024857735992799804 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 2763 11407 AETLSSWEA True H1975_Epitope_Rep3 992.445090633 992.44454496793 48.993 1 0.1584947928905875 0.0006540935353755587 0.002486043538167784 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant', 'LTN1|p.L617Ffs*33|1|0.19|ENSG00000198862|chr21:28966643-28966643|A/-|frameshift_variant'] 36610 20770 GVIAEILRGV True PC9_epitope_Rep4 1025.6233297784897 1025.62222993586 88.047 2 0.15849330120764787 0.0006540935353755587 0.0024861290545953067 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 41482 11605 HYLPDLHHL True PC9_epitope_Rep4 1143.5825275956702 1143.5808749037901 52.399 3 0.15849297350467867 0.0006540935353755587 0.0024861478418143207 ['ENSG00000130702|ENST00000252999|LAMA5'] 104928 10640 SRDDTTLNAL True PC9_epitope_Rep2 1104.54111627616 1104.54000993586 46.241 2 0.15848322051484118 0.0006540935353755587 0.0024867070458353922 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 31332 12303 GDLPFVVPR True H1975_Epitope_Rep1 998.5549158654999 998.55380993586 52.35 2 0.15848228679330348 0.0006540935353755587 0.002486760588910503 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 33373 7149 GKWGAKIVM True NCI_RA007_Epitope_Rep3 988.5528076905199 988.55170993586 35.238 2 0.1584709691908006 0.0006540935353755587 0.002487409673970303 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant'] 25685 8942 FEQKGFRLV True H1975_Epitope_Rep2 1122.6185787512197 1122.61693490379 39.356 3 0.15846313996959313 0.0006540935353755587 0.0024878587929927265 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 114492 19455 TPYNYPVPV True PC9_epitope_Rep5 1048.5229470308798 1048.52184993586 79.885 2 0.15845550945465767 0.0006540935353755587 0.002488296591233608 ['ENSG00000170906|ENST00000485876|NDUFA3'] 83303 7522 PTDPKVVVY True H1975_Epitope_Rep2 1016.5542471591598 1016.55314993586 33.884 2 0.15843222483646516 0.0006540935353755587 0.002489633013883388 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 14394 7340 DTDGKCLEY True H1975_Epitope_Rep2 1042.4277263166998 1042.42662993586 33.175 2 0.15843083459113733 0.0006540935353755587 0.0024897128297967992 ['ENST00000498524.5_1_3:15727727-15838055:-|nuORF', 'nc|ENSG00000206560|O15084-2|ANKRD28', 'nc|ENSG00000206560|O15084|ANKRD28', 'ENSG00000206560|ENST00000683139|ANKRD28', 'nc|ENSG00000206560|O15084-1|ANKRD28'] 120365 11582 VEEGFSIQA True H1975_Epitope_Rep2 978.4658260775799 978.4652749679301 49.614 1 0.15843000573963748 0.0006540935353755587 0.0024897604165269676 ['ENSG00000172409|ENST00000533682|CLP1'] 76723 16589 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53911496793 68.815 1 0.15842898021022853 0.0006540935353755587 0.002489819296353928 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 139146 12263 YLDSIPPGQY True H1975_Epitope_Rep3 1151.54989005471 1151.5487899358602 52.348 2 0.15842026779717328 0.0006540935353755587 0.002490319567598776 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 105770 3649 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 20.125 2 0.15841897257341714 0.0006540935353755587 0.0024903939485810445 ['ENSG00000115207|ENST00000264720|GTF3C2'] 45864 12145 ISDRLIGIY True H1975_Epitope_Rep1 1048.59169529704 1048.5905899358602 51.732 2 0.1584156276495237 0.0006540935353755587 0.002490586048217706 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 115031 15247 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 63.467 2 0.15841406453305412 0.0006540935353755587 0.0024906758233751132 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 38492 9176 HEQLTVAEI True H1975_Epitope_Rep1 1038.53457434374 1038.53346993586 40.201 2 0.1584116271700049 0.0006540935353755587 0.002490815815967629 ['ENSG00000167553|ENST00000301072|TUBA1C'] 90832 8931 RETETVFVP True NCI_RA007_Epitope_Rep3 1076.5502244078798 1076.54912993586 42.212 2 0.15840452502180977 0.0006540935353755587 0.0024912237803504603 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 97433 5170 SEEEGVPST True H1975_Epitope_Rep2 933.39272070697 933.39217496793 24.962 1 0.15840452008607636 0.0006540935353755587 0.00249122406389399 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 8272 5489 ATIEEAYSR True NCI_RA007_Epitope_Rep3 1038.4981888350198 1038.49708993586 28.595 2 0.15839799223309714 0.0006540935353755587 0.0024915990982587225 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 7150 7393 AQYEDIANR True PC9_epitope_Rep1 1078.5043368446197 1078.5032299358602 33.25 2 0.15839789384245268 0.0006540935353755587 0.002491604751371204 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 97611 9795 SEEWADNHLP True H1975_Epitope_Rep3 1196.50981614788 1196.50870993586 42.7 2 0.15838386274796962 0.0006540935353755587 0.002492411050147773 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 74979 13829 NHQDVVNIL True PC9_epitope_Rep4 1050.54580773378 1050.54470993586 61.092 2 0.15838136883969678 0.0006540935353755587 0.0024925543901900497 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ'] 71224 20580 LYPEVFEKF True PC9_epitope_Rep1 1170.5961119711399 1170.5950099358602 83.975 2 0.158367132739646 0.0006540935353755587 0.0024933727828257216 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 28546 12916 FSEQGINEFLR True H1975_Epitope_Rep1 1338.6568147347398 1338.6557099358602 54.755 2 0.15836397032314586 0.0006540935353755587 0.0024935546175050556 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 62008 18519 LLDPSVFHV True PC9_epitope_Rep6 1025.5545815123298 1025.5534899358602 83.875 2 0.15835649389977055 0.0006540935353755587 0.0024939845543984736 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 27853 11801 FQDKNHLYL True PC9_epitope_Rep5 1176.5927579262 1176.5916699358602 50.389 2 0.15834968581473668 0.0006540935353755587 0.0024943761224059872 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 101321 22905 SLINVGLISV True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 93.098 2 0.15833659399832628 0.0006540935353755587 0.0024951292726280564 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 135089 8231 WEDFKQNTP True H1975_Epitope_Rep2 1163.5247379360299 1163.52364993586 36.611 2 0.15832877458597638 0.0006540935353755587 0.0024955792185737224 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 105060 13700 SRDPVQLNL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 60.585 2 0.15832435656383556 0.0006540935353755587 0.0024958334769586516 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 73123 17198 MRMLAEDEL True PC9_epitope_Rep1 1106.51001647202 1106.5089099358602 70.971 2 0.1583117793127193 0.0006540935353755587 0.0024965574428089518 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 14476 10230 DTFLEDVK True H1975_Epitope_Rep1 965.4705771048499 965.46948993586 44.294 2 0.15830078620256133 0.0006540935353755587 0.002497190394763454 ['CON__P34955'] 40957 13307 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.52457496793 56.315 1 0.1582978469425981 0.0006540935353755587 0.0024973596561149846 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 133950 15886 VYILQPEVI True NCI_RA007_Epitope_Rep3 1072.6168474157198 1072.61574993586 70.144 2 0.15828573734220253 0.0006540935353755587 0.00249805712500398 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 90090 6896 REAELLTSA True H1975_Epitope_Rep2 988.5189242795999 988.51782993586 31.445 2 0.15828037604379902 0.0006540935353755587 0.002498365978367561 ['nc|ENSG00000156970|O60566-2|BUB1B', 'ENSG00000156970|ENST00000287598|BUB1B', 'nc|ENSG00000156970|O60566-3|BUB1B', 'BUB1B|p.D466Efs*16|1|0.1|ENSG00000156970|chr15:40199723-40199724|-/AAATGAT|frameshift_variant'] 134691 17092 VYTHNLYYL True PC9_epitope_Rep2 1184.5866099165999 1184.58550993586 70.994 2 0.1582705022343435 0.0006540935353755587 0.0024989348879515347 ['ENSG00000198954|ENST00000361983|KIFBP'] 56092 13937 LATRALPEL True PC9_epitope_Rep4 982.5811306133398 982.58002993586 61.512 2 0.15826844613238647 0.0006540935353755587 0.002499053372791103 ['ENSG00000173801|ENST00000393931|JUP'] 67943 11200 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.58167496793 48.05 1 0.15825981206727124 0.0006540935353755587 0.002499550980263044 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 111222 4484 THISSQNSEL True PC9_epitope_Rep4 1114.52546621202 1114.52436993586 23.719 2 0.15825267527003067 0.0006540935353755587 0.002499962370292013 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 76727 14746 NQTPVTLQV True PC9_epitope_Rep6 998.5396597241801 998.53856993586 68.668 2 0.1582517147230906 0.0006540935353755587 0.0025000177447475685 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 134512 15839 VYQLRFQFL True NCI_RA007_Epitope_Rep3 1212.6655289436396 1212.6644299358602 69.933 2 0.15824688979214993 0.0006540935353755587 0.0025002959151357662 ['ENSG00000068654|ENST00000263857|POLR1A'] 98342 6130 SEYIHAQVA True H1975_Epitope_Rep2 1016.4927095317598 1016.49160993586 28.556 2 0.15824236075806952 0.0006540935353755587 0.0025005570543774704 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 37858 19197 GYMEGYYTF True PC9_epitope_Rep6 1129.44264810485 1129.4415499358602 86.494 2 0.15823977495792152 0.0006540935353755587 0.0025007061610466115 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 5134 20898 ALLPHLYTL True PC9_epitope_Rep1 1039.60661708519 1039.6055299358602 85.205 2 0.15823226901522872 0.0006540935353755587 0.0025011390313576134 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 116888 18111 TVFDEAIRAV True PC9_epitope_Rep6 1119.59242357303 1119.5913299358601 82.299 2 0.15823213061557162 0.0006540935353755587 0.0025011470136159474 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 90988 15139 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54415490379 63.491 3 0.15823064964170408 0.0006540935353755587 0.002501232430997553 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 996 7358 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 33.244 2 0.15822524786578837 0.0006540935353755587 0.0025015440111792876 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 122252 7452 VGARIYHTI True PC9_epitope_Rep2 1028.5767139392399 1028.57560993586 34.039 2 0.1582212906624908 0.0006540935353755587 0.0025017722914632465 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant', 'ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 114642 7028 TQDTQPHYI True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 34.284 2 0.15821961681047272 0.0006540935353755587 0.0025018688576868985 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 49442 9179 KEYDGVVVV True H1975_Epitope_Rep3 1006.5335117145797 1006.53240993586 40.297 2 0.1582125994280959 0.0006540935353755587 0.0025022737381044883 ['ENSG00000198695|ENST00000361681|MT-ND6'] 85809 13765 QHDPYITSI True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 58.029 2 0.15820646684323436 0.0006540935353755587 0.002502627622102658 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 86148 9019 QIDPSIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 44.725 2 0.1582059199946298 0.0006540935353755587 0.002502659180711664 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.R165S|1|0.22|ENSG00000186081|chr12:52519802-52519802|C/A|missense_variant'] 7718 5129 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 24.814 2 0.15819770414395964 0.0006540935353755587 0.00250313336491413 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 134713 10145 VYTPVASRQSL True PC9_epitope_Rep4 1219.65608645875 1219.6549899358602 46.7 2 0.15819756014464398 0.0006540935353755587 0.002503141676746141 ['ENSG00000070950|ENST00000264926|RAD18'] 16458 10090 EELFIVSK True H1975_Epitope_Rep1 963.5276980581499 963.52660993586 43.747 2 0.1581945334510768 0.0006540935353755587 0.002503316387899662 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 38988 18491 HHLVIPSVL True PC9_epitope_Rep1 1013.6022004110899 1013.60110993586 75.916 2 0.1581891331301571 0.0006540935353755587 0.002503628143215636 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 26169 5432 FHDESTQV True PC9_epitope_Rep1 961.41412485789 961.41302993586 25.728 2 0.15818463246220818 0.0006540935353755587 0.0025038879920420663 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 35573 8576 GSYTFDPVTK True NCI_RA007_Epitope_Rep4 1113.5342399905699 1113.5331499358601 39.772 2 0.1581798256437014 0.0006540935353755587 0.002504165546389071 ['ENSG00000185009|ENST00000355264|AP3M1'] 11710 17783 DHAEFSYVL True PC9_epitope_Rep6 1079.49237517859 1079.4912699358601 81.037 2 0.15817866982995987 0.0006540935353755587 0.0025042322897335842 ['ENSG00000188352|ENST00000338382|FOCAD'] 2544 12782 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.49657496793 54.229 1 0.15817705134509333 0.0006540935353755587 0.0025043257533586935 ['ENSG00000123607|ENST00000243344|TTC21B'] 94710 5869 RSDPNSESLY True H1975_Epitope_Rep3 1166.52038083158 1166.5192899358601 27.586 2 0.15817663879704366 0.0006540935353755587 0.0025043495775774853 ['ENSG00000138593|ENST00000559471|SECISBP2L'] 29413 15964 FVDRGFYSV True PC9_epitope_Rep2 1088.52909504048 1088.5279899358602 66.659 2 0.1581747583399356 0.0006540935353755587 0.0025044581748764456 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 24252 13287 EYSRFVNQI True PC9_epitope_Rep4 1154.5720224816198 1154.57092993586 59.004 2 0.15817053285198793 0.0006540935353755587 0.0025047022159790625 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF'] 27903 21524 FQDSVFNDL True PC9_epitope_Rep5 1083.48728979815 1083.48618993586 87.828 2 0.158168157612979 0.0006540935353755587 0.0025048394072314534 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 27494 21080 FMFDEKLVTV True PC9_epitope_Rep3 1227.62094681999 1227.6198499358602 86.366 2 0.1581636696509177 0.0006540935353755587 0.00250509864757305 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 132945 14803 VVPAALKVV True PC9_epitope_Rep1 894.59023874506 894.58914993586 61.76 2 0.15816024471998144 0.0006540935353755587 0.0025052965015468736 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 104311 11066 SQIPAQPSV True PC9_epitope_Rep4 925.48689587533 925.4863449679301 50.342 1 0.15815174740283727 0.0006540935353755587 0.0025057874482840373 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 43856 11270 IHSSETLTL True PC9_epitope_Rep2 999.52367530687 999.52256993586 48.676 2 0.15814823721101268 0.0006540935353755587 0.0025059902835272243 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 68173 6757 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 30.906 2 0.1581446349754282 0.0006540935353755587 0.0025061984545273063 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 109697 5425 TEDDPQEVSA True H1975_Epitope_Rep3 1089.44621283181 1089.44567496793 25.926 1 0.158143859105023 0.0006540935353755587 0.002506243293864658 ['ENSG00000179409|ENST00000319004|GEMIN4'] 97869 10535 SELPVSEVA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 45.544 1 0.158132604923477 0.0006540935353755587 0.002506893788990286 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 54023 12133 KVIDDTNITRL True PC9_epitope_Rep2 1286.7194149913 1286.7183099358601 51.979 2 0.1581315860164493 0.0006540935353755587 0.0025069526904462976 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 111144 19580 THFLQPIYL True PC9_epitope_Rep4 1130.6124307416198 1130.61132993586 83.437 2 0.1581283867244204 0.0006540935353755587 0.0025071376456013337 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 18409 21052 EIVTTIPTI True PC9_epitope_Rep3 985.56956287013 985.56846993586 86.257 2 0.15812723547581334 0.0006540935353755587 0.0025072042040849753 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 53150 16738 KPYNVYITV True PC9_epitope_Rep5 1095.59644632431 1095.5953499358602 69.389 2 0.15811736426373163 0.0006540935353755587 0.0025077749724286185 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 141836 5852 YVDGVEVHN True NCI_RA007_Epitope_Rep2 1030.47197408718 1030.47086993586 27.381 2 0.15811225742175247 0.0006540935353755587 0.002508070308625423 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 90132 8500 REDDVPFTA True H1975_Epitope_Rep2 1048.48253877088 1048.4814499358602 37.649 2 0.15810925631021563 0.0006540935353755587 0.0025082438835238416 ['ENSG00000103148|ENST00000611875|NPRL3', 'NPRL3|p.R422P|1|0.19|ENSG00000103148|chr16:89799-89799|C/G|missense_variant'] 40065 9975 HPTWALKEA True PC9_epitope_Rep3 1051.5450794577898 1051.54398993586 43.324 2 0.1581070180294247 0.0006540935353755587 0.0025083733464856886 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 104229 14345 SQHGVIIQL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 63.082 2 0.15810593445282395 0.0006540935353755587 0.0025084360233401225 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 96620 14078 SAHLFEVEL True NCI_RA007_Epitope_Rep5 1043.52876068731 1043.52766993586 60.839 2 0.1580985166126198 0.0006540935353755587 0.002508865132257835 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 132380 18521 VVAELLRTV True PC9_epitope_Rep5 998.61243074162 998.61132993586 76.265 2 0.15809690522862013 0.0006540935353755587 0.002508958357655156 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 7533 15377 ASDYFDQLY True H1975_Epitope_Rep1 1120.47130538084 1120.4707749679299 64.419 1 0.1580910210433074 0.0006540935353755587 0.002509298812095078 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 108457 21901 SYLSSILRF True PC9_epitope_Rep3 1084.59169529704 1084.5905899358602 89.547 2 0.1580846497123752 0.0006540935353755587 0.0025096675044049806 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 86014 14482 QHNDLEFKL True PC9_epitope_Rep5 1142.57202248162 1142.57038490379 60.706 3 0.15808207328994126 0.0006540935353755587 0.0025098166106077104 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 9939 20935 AYMPHTFFI True PC9_epitope_Rep1 1125.53173789277 1125.53064993586 85.348 2 0.1580739145874903 0.0006540935353755587 0.0025102888404073005 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 21382 6594 ERIDTRNEL True PC9_epitope_Rep5 1144.58364979448 1144.5820049037902 30.334 3 0.15807342560919765 0.0006540935353755587 0.0025103171455335537 ['ENSG00000044574|ENST00000324460|HSPA5'] 23084 17990 EVIKELAQI True PC9_epitope_Rep3 1041.6070110080097 1041.6059099358602 74.403 2 0.15807301921507197 0.0006540935353755587 0.002510340670413378 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 125005 18354 VIAEILRGV True PC9_epitope_Rep4 968.6018660579199 968.60076993586 78.665 2 0.1580717131703331 0.0006540935353755587 0.0025104162747322076 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 40150 12952 HQDLSTPVL True PC9_epitope_Rep2 1008.52400966004 1008.52290993586 55.112 2 0.15807126352764733 0.0006540935353755587 0.0025104423041742785 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 14277 6023 DSTANEVEAVK True NCI_RA007_Epitope_Rep1 1161.5513466066898 1161.5502499358602 27.47 2 0.15806848825306258 0.0006540935353755587 0.0025106029684806006 ['ENSG00000185624|ENST00000331483|P4HB'] 115041 13755 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 60.804 2 0.1580649984699491 0.0006540935353755587 0.0025108050111953715 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 134304 16446 VYNPVRAEW True PC9_epitope_Rep5 1132.5665431783598 1132.5654499358602 68.259 2 0.15806186441154477 0.0006540935353755587 0.002510986472885197 ['ENSG00000165572|ENST00000379485|KBTBD6'] 5290 12396 ALQEMVHQV True PC9_epitope_Rep5 1053.52771514149 1053.52660993586 52.678 2 0.1580603382147471 0.0006540935353755587 0.002511074844277198 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 21800 7844 ERYKEVAEL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 35.542 2 0.15805244403140367 0.0006540935353755587 0.0025115319908324764 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 104287 15055 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.57494993586 69.955 2 0.15805119963739409 0.0006540935353755587 0.0025116040603857166 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 91819 6516 RKISNNITL True NCI_RA007_Epitope_Rep2 1057.62439240765 1057.6232899358602 29.956 2 0.1580503138023515 0.0006540935353755587 0.0025116553651175245 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 90982 10567 RFEEAHFTF True NCI_RA007_Epitope_Rep4 1182.5458077337796 1182.54470993586 47.491 2 0.1580389284376418 0.0006540935353755587 0.0025123148621510644 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 105004 15950 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.60010993586 66.34 2 0.15803817783757493 0.0006540935353755587 0.002512358346718455 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 49205 4469 KEMPVKVEA True H1975_Epitope_Rep2 1029.5528672601697 1029.5517699358602 22.303 2 0.15803780675117704 0.0006540935353755587 0.0025123798451708256 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 101503 21432 SLLDPVPEV True PC9_epitope_Rep5 967.52261267771 967.52150993586 87.502 2 0.1580249355060991 0.0006540935353755587 0.0025131256392120723 ['ENSG00000089154|ENST00000300648|GCN1'] 140233 13252 YQYPRPLLI True H1975_Epitope_Rep1 1161.6546299067697 1161.6535299358602 56.07 2 0.15801200654623582 0.0006540935353755587 0.0025138749998696343 ['ENSG00000160991|ENST00000495936|ORAI2'] 77124 13749 NRNAEEFEL True PC9_epitope_Rep1 1120.51490152832 1120.51380993586 57.73 2 0.1580109644037377 0.0006540935353755587 0.0025139354120116515 ['ENSG00000138382|ENST00000260953|METTL5'] 53163 15883 KQALKYFNL True PC9_epitope_Rep3 1123.6389798426299 1123.6378899358601 66.244 2 0.1580101061851494 0.0006540935353755587 0.0025139851633242095 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 14635 12510 DVDPETLSY True H1975_Epitope_Rep1 1037.45532096353 1037.45477496793 53.161 1 0.15800692263316804 0.0006540935353755587 0.002514169723830448 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 130656 10497 VSTEVDARL True PC9_epitope_Rep3 988.5189242795998 988.51782993586 45.316 2 0.15799646364793996 0.0006540935353755587 0.002514776159257239 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 140522 17405 YRNAYTMVL True PC9_epitope_Rep5 1129.55901526977 1129.5579099358602 71.948 2 0.15799553143712947 0.0006540935353755587 0.0025148302180175415 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3'] 17852 21057 EHVFWVVSL True PC9_epitope_Rep4 1114.5811306133398 1114.58002993586 89.156 2 0.15799380077861244 0.0006540935353755587 0.002514930581712145 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 31938 4770 GENPIYKSA True NCI_RA007_Epitope_Rep3 977.4818104948899 977.48070993586 25.726 2 0.15798478563512694 0.0006540935353755587 0.0025154534491641425 ['ENSG00000150093|ENST00000302278|ITGB1'] 48540 5805 KALPLTKV True NCI_RA007_Epitope_Rep4 868.57458868092 868.57348993586 28.953 2 0.15798242776197233 0.0006540935353755587 0.0025155902208640344 ['ENSG00000100227|ENST00000252115|POLDIP3', 'nc|ENSG00000100227|Q9BY77-2|POLDIP3'] 105674 16670 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.5113499358602 69.354 2 0.1579801663758188 0.0006540935353755587 0.0025157214026751734 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 71899 6125 M[Oxidation]EQELAHAV True H1975_Epitope_Rep3 1042.4753455958999 1042.4742499358601 28.572 2 0.15797729097152308 0.0006540935353755587 0.0025158882132139144 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 118084 19202 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 81.96 2 0.15797617710056613 0.0006540935353755587 0.0025159528350638524 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 137486 9126 YEEFDEKIA True H1975_Epitope_Rep2 1142.5131701928199 1142.5120699358602 40.055 2 0.15797282024008857 0.0006540935353755587 0.0025161475952324764 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 3494 12319 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep1 1042.5658747883201 1042.56476993586 52.412 2 0.15797277084906833 0.0006540935353755587 0.0025161504609400574 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 35753 15338 GTIDEIQKL True PC9_epitope_Rep5 1015.5549754351499 1015.55386993586 64.008 2 0.15797215822716235 0.0006540935353755587 0.0025161860060372646 ['ENSG00000167986|ENST00000301764|DDB1'] 17875 19180 EHVPVVIGL True PC9_epitope_Rep3 961.5596668927699 961.55856993586 78.994 2 0.15796767733945996 0.0006540935353755587 0.0025164460080450476 ['ENSG00000170677|ENST00000397942|SOCS6'] 100495 22083 SLAQYLINV True PC9_epitope_Rep2 1019.5651461960299 1019.5645749679301 90.414 1 0.15796150611366158 0.0006540935353755587 0.0025168041352540724 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 129285 20061 VQVPVPVTV True PC9_epitope_Rep3 936.5644179200399 936.56332993586 82.414 2 0.15795995992637443 0.0006540935353755587 0.002516893871221762 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 142809 11830 YYSHLEGARF True PC9_epitope_Rep5 1241.5829215184897 1241.58127490379 50.501 3 0.1579597365690973 0.0006540935353755587 0.0025169068344570314 ['ENSG00000142207|ENST00000382751|URB1'] 106896 12770 SVDGVIKEV True PC9_epitope_Rep5 944.51786165044 944.51676993586 54.129 2 0.15795930414842546 0.0006540935353755587 0.002516931931526986 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 34792 9513 GQGQIYVHL True NCI_RA007_Epitope_Rep3 1013.5294293936499 1013.52832993586 44.512 2 0.1579580347167574 0.0006540935353755587 0.002517005608946758 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 54449 13905 KYGALVNNF True PC9_epitope_Rep2 1024.53418042092 1024.53308993586 58.765 2 0.15795462522214063 0.0006540935353755587 0.0025172035056112148 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 103898 5708 SQADVSQKL True PC9_epitope_Rep5 974.50327421546 974.50216993586 26.951 2 0.1579544013999138 0.0006540935353755587 0.0025172164974264794 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 104313 11982 SQIPAQPSV True PC9_epitope_Rep5 925.48689587533 925.4863449679301 51.085 1 0.15794831193838332 0.0006540935353755587 0.0025175699873752886 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 48165 10935 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 49.83 3 0.15794523031759675 0.0006540935353755587 0.0025177488926766034 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 75054 13596 NHTIYINNL True PC9_epitope_Rep2 1100.5614577979202 1100.56036993586 57.586 2 0.15794301430058044 0.0006540935353755587 0.0025178775526872835 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 74838 13710 NHFMDNTTL True PC9_epitope_Rep1 1091.47059418819 1091.46948993586 57.586 2 0.15793819759446343 0.0006540935353755587 0.00251815722906816 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 77253 16805 NRYGQLTIL True PC9_epitope_Rep2 1076.59784330664 1076.59674993586 69.888 2 0.15793704308793363 0.0006540935353755587 0.002518224268739865 ['ENST00000397656.8_1_12:111066004-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-4|TCTN1', 'ENST00000495659.6_1_12:111052207-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-3|TCTN1', 'nc|ENSG00000204852|Q2MV58|TCTN1', 'ENSG00000204852|ENST00000397659|TCTN1'] 2303 6310 AEPAKIEAFR True NCI_RA007_Epitope_Rep1 1130.6084079903399 1130.6067749037902 28.57 3 0.15792427240728688 0.0006540935353755587 0.0025189659531132443 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 139134 15203 YLDQMEDLY True H1975_Epitope_Rep2 1188.50089125696 1188.49978993586 63.634 2 0.15791541640002701 0.0006540935353755587 0.0025194804125477626 ['ENSG00000198356|ENST00000357332|GET3'] 110429 12295 TEYSFLKEV True NCI_RA007_Epitope_Rep4 1114.55464108198 1114.55354993586 54.29 2 0.15791431900504116 0.0006540935353755587 0.0025195441692564325 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 78348 12841 NYKDLNGNVF True PC9_epitope_Rep6 1182.5669371011797 1182.5658499358601 60.905 2 0.15790978496021132 0.0006540935353755587 0.0025198076063178234 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 84262 21373 PYNPILGETF True PC9_epitope_Rep2 1149.57062549929 1149.5695299358601 87.68 2 0.1579068243274339 0.0006540935353755587 0.0025199796398332175 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 77665 8832 NTIDPSHPM True PC9_epitope_Rep3 1010.4491304676201 1010.44802993586 38.922 2 0.1579055880496023 0.0006540935353755587 0.002520051479709943 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 54847 17015 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 72.21 2 0.15790362524110468 0.0006540935353755587 0.0025201655423488342 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 28499 10444 FSDYLHPQY True H1975_Epitope_Rep1 1168.5189242796 1168.5178299358602 45.127 2 0.15789360475355016 0.0006540935353755587 0.0025207479327797994 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 35856 13567 GTMEWIMIK True NCI_RA007_Epitope_Rep3 1107.54567370475 1107.5445699358602 60.661 2 0.1578831586582464 0.0006540935353755587 0.002521355202534053 ['ENSG00000168273|ENST00000477703|UQCC5'] 99176 5639 SHITPSTQQHL True PC9_epitope_Rep3 1247.62584895963 1247.62420490379 26.767 3 0.15787817764007084 0.0006540935353755587 0.002521644818763959 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 40282 8670 HQLSQLQAL True NCI_RA007_Epitope_Rep3 1036.5665431783598 1036.5654499358602 41.185 2 0.15787544500790063 0.0006540935353755587 0.0025218037189836833 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 141412 15162 YTELLAQVY True H1975_Epitope_Rep2 1098.5597264624198 1098.5586299358602 63.475 2 0.15787278774145028 0.0006540935353755587 0.0025219582463359203 ['ENST00000487921.5_1_17:56769962-56783250:+|nuORF', 'ENST00000475762.5_1_17:56772326-56801433:+|nuORF', 'ENSG00000108384|ENST00000337432|RAD51C', 'ENST00000487525.5_1_17:56772519-56783250:+|nuORF'] 48169 12754 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62676490379 54.065 3 0.1578712941700838 0.0006540935353755587 0.0025220451057675524 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 106149 13041 STDLQDYTYY True H1975_Epitope_Rep3 1267.52446315251 1267.52387496793 55.401 1 0.1578701090451298 0.0006540935353755587 0.002522114029459797 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 136038 16464 WRDPDEPVL True PC9_epitope_Rep3 1125.5454733806098 1125.54436993586 68.466 2 0.15786838317584706 0.0006540935353755587 0.00252221440475597 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 44543 6599 ILNDDTALK True H1975_Epitope_Rep3 1001.53932537101 1001.53822993586 30.337 2 0.15786662797979786 0.0006540935353755587 0.0025223164897648915 ['ENSG00000119318|ENST00000358015|RAD23B'] 132045 12613 VTTDIQVKV True PC9_epitope_Rep1 1001.5757108797299 1001.5746099358599 53.384 2 0.15785166395247424 0.0006540935353755587 0.002523186988998343 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 33124 5322 GISEETTTGVH True NCI_RA007_Epitope_Rep1 1129.52513185885 1129.5240299358602 24.779 2 0.15784555791547708 0.0006540935353755587 0.00252354228034871 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 52853 10044 KPANVFITA True PC9_epitope_Rep6 959.54401682863 959.54290993586 49.216 2 0.15784555032077235 0.0006540935353755587 0.0025235427222921095 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 75136 11060 NHYNNIM[Oxidation]AL True PC9_epitope_Rep5 1104.50222905008 1104.50112993586 47.529 2 0.15784016125592695 0.0006540935353755587 0.002523856336795506 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 104887 18161 SRDAAWYQL True PC9_epitope_Rep1 1108.53015766964 1108.5290699358602 74.647 2 0.1578366462957604 0.0006540935353755587 0.0025240609094768773 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 128771 17680 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 73.286 2 0.15782498010695503 0.0006540935353755587 0.0025247400069337298 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 40744 4295 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 22.932 3 0.15782369785925876 0.0006540935353755587 0.002524814658640764 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 48195 21339 IYPSPTGVLI True PC9_epitope_Rep5 1058.60119735158 1058.60010993586 87.139 2 0.15782040276587192 0.0006540935353755587 0.002525006507145959 ['ENSG00000174231|ENST00000304992|PRPF8'] 99109 19001 SHIFEVQAL True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 78.114 2 0.15781927504352147 0.0006540935353755587 0.002525072169278616 ['ENSG00000124201|ENST00000396105|ZNFX1'] 89531 8722 QYLPHVARL True NCI_RA007_Epitope_Rep4 1095.61891310439 1095.6178099358601 40.341 2 0.1578172651595363 0.0006540935353755587 0.0025251891998881856 ['ENSG00000148248|ENST00000371989|SURF4', 'ENST00000467910.5_1_9:136231851-136242840:-|nuORF', 'nc|ENSG00000148248|O15260-3|SURF4', 'nc|ENSG00000148248|O15260-2|SURF4'] 90611 5070 REMPVKVEA True H1975_Epitope_Rep2 1057.5590152697698 1057.5579099358602 24.584 2 0.15781308983637113 0.0006540935353755587 0.0025254323360098013 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 87906 12522 QRISEAYESL True PC9_epitope_Rep2 1194.5880664685797 1194.58696993586 53.473 2 0.1578123295074652 0.0006540935353755587 0.0025254766137612914 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 23088 16406 EVIKELAQI True PC9_epitope_Rep4 1041.6070110080097 1041.60647496793 71.067 1 0.1578067986387815 0.0006540935353755587 0.0025257987272016675 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 27461 13237 FM[Oxidation]DPASALY True H1975_Epitope_Rep1 1029.44773386573 1029.4471749679299 56.014 1 0.15779990741002037 0.0006540935353755587 0.002526200124318528 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 65834 12623 LSDLGISSY True H1975_Epitope_Rep1 953.47057710485 953.47002496793 53.604 1 0.15778516751189325 0.0006540935353755587 0.002527058900858852 ['ENSG00000165029|ENST00000374736|ABCA1'] 131108 12292 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.5222499358601 52.365 2 0.15778260024967264 0.0006540935353755587 0.002527208504586331 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 91752 8323 RKFLDGNEL True NCI_RA007_Epitope_Rep2 1090.5771078620598 1090.5760099358602 37.015 2 0.1577809240100312 0.0006540935353755587 0.002527306189950394 ['ENSG00000213719|ENST00000375784|CLIC1'] 55220 9746 LADDSVRSL True PC9_epitope_Rep2 974.50327421546 974.50216993586 42.827 2 0.15778088742864707 0.0006540935353755587 0.002527308321827108 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 38955 18329 HHIPDVITYL True PC9_epitope_Rep4 1206.63970811862 1206.6386099358601 78.571 2 0.1577760280761683 0.0006540935353755587 0.0025275915293748014 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 120775 10356 VELDNM[Oxidation]PLR True PC9_epitope_Rep1 1101.54884488933 1101.54774993586 44.717 2 0.15776907991700065 0.0006540935353755587 0.002527996529530851 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 18794 18949 ELDETKIIL True PC9_epitope_Rep5 1072.6015912743999 1072.6004899358602 77.911 2 0.1577623954067477 0.0006540935353755587 0.0025283862230269355 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 48253 8675 IYQKYIARF True NCI_RA007_Epitope_Rep4 1200.6655289436396 1200.6638849037902 40.157 3 0.157759945265819 0.0006540935353755587 0.0025285290763280392 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 7128 17455 AQWDIGIAHA True PC9_epitope_Rep2 1080.53524305008 1080.5341499358601 72.392 2 0.15775905488077357 0.0006540935353755587 0.0025285809914367234 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'nc|ENSG00000147548|Q9BZ95-2|NSD3'] 90064 7784 REAEEPVFAA True H1975_Epitope_Rep2 1117.54038800017 1117.53928993586 34.888 2 0.15775411386498114 0.0006540935353755587 0.002528869103402791 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 11632 8263 DGIVLGADTR True H1975_Epitope_Rep3 1015.52982331647 1015.52872993586 36.77 2 0.15774105263321436 0.0006540935353755587 0.0025296308651507845 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 86052 8926 QHQSGIVQL True PC9_epitope_Rep6 1008.5352430500798 1008.53414993586 44.309 2 0.15773648487691305 0.0006540935353755587 0.00252989732148722 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 73252 4620 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 22.872 2 0.15773297980369155 0.0006540935353755587 0.0025301018060686835 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 1881 9737 AEIEHFVDP True H1975_Epitope_Rep2 1055.49237517859 1055.4912699358601 42.439 2 0.15773232635997647 0.0006540935353755587 0.0025301399295401504 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 127397 8734 VNELTEFAK True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 38.599 2 0.15773201227216474 0.0006540935353755587 0.00253015825437941 ['CON__P02769'] 118948 12649 VADTVARVL True PC9_epitope_Rep1 942.5498304850598 942.54872993586 53.523 2 0.15771977614582444 0.0006540935353755587 0.002530872250357481 ['ENSG00000145632|ENST00000274289|PLK2'] 43885 20946 IHVDFPVIL True PC9_epitope_Rep4 1051.60661708519 1051.6055299358602 88.728 2 0.1577183921036216 0.0006540935353755587 0.0025309530239153804 ['ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 130085 10102 VSDKTLSFY True H1975_Epitope_Rep3 1058.52842633414 1058.52732993586 43.899 2 0.15771764413402295 0.0006540935353755587 0.002530996676954158 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 68054 12007 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48076993586 51.265 2 0.15771596299882792 0.0006540935353755587 0.002531094794192324 ['ENSG00000174231|ENST00000304992|PRPF8'] 34811 20544 GQIDLLERL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 83.834 2 0.15770963892799453 0.0006540935353755587 0.0025314639242475334 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.N627Kfs*7|1|0.66|ENSG00000134982|chr5:112835084-112835085|-/A|frameshift_variant', 'APC|p.R805Dfs*15|1|0.71|ENSG00000134982|chr5:112838007-112838007|C/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 54036 12396 KVIDEIYRV True PC9_epitope_Rep4 1133.64445914589 1133.64280490379 55.486 3 0.15770357583569572 0.0006540935353755587 0.002531817871681136 ['ENSG00000143756|ENST00000366862|FBXO28'] 109169 19745 TAM[Oxidation]DVVYAL True PC9_epitope_Rep5 997.4790339940099 997.47792993586 80.994 2 0.15770249984213877 0.0006540935353755587 0.002531880690524652 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 86224 19573 QILDGVHYL True PC9_epitope_Rep3 1056.5603951687601 1056.55928993586 80.522 2 0.15770109430204687 0.0006540935353755587 0.0025319627513547484 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 49512 20560 KFIDPIYQVW True PC9_epitope_Rep4 1307.69140933831 1307.6903099358601 87.235 2 0.15769592851978062 0.0006540935353755587 0.002532264372375828 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 134742 9821 VYTSKSDVW True PC9_epitope_Rep4 1083.52367530687 1083.52256993586 45.42 2 0.1576859378515121 0.0006540935353755587 0.0025328478118295614 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENSG00000153208|ENST00000295408|MERTK'] 104279 17473 SQIHDIVLV True PC9_epitope_Rep3 1022.5760452328999 1022.57494993586 72.388 2 0.15766950449657186 0.0006540935353755587 0.0025338077860005623 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 65405 15124 LREPLPATL True PC9_epitope_Rep2 1008.59678067748 1008.59568993586 63.434 2 0.15766411670046676 0.0006540935353755587 0.002534122599621438 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 43193 16580 IFIDPGYQTF True NCI_RA007_Epitope_Rep4 1199.58627556343 1199.5851699358602 71.875 2 0.15766290606484148 0.0006540935353755587 0.0025341933434871924 ['ENSG00000121741|ENST00000610343|ZMYM2'] 97438 8316 SEEEISFRA True H1975_Epitope_Rep3 1066.49310345458 1066.49200993586 36.97 2 0.157662838159574 0.0006540935353755587 0.0025341973116107972 ['ENSG00000162928|ENST00000295030|PEX13'] 54096 17564 KVLNELTQL True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 72.353 2 0.15766082350926158 0.0006540935353755587 0.00253431504287591 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 108504 20655 SYMGHFDLL True PC9_epitope_Rep5 1081.49026700361 1081.48967496793 84.502 1 0.1576558778868616 0.0006540935353755587 0.0025346040761712913 ['ENSG00000169976|ENST00000367569|SF3B5'] 88179 14322 QRVPLSVQL True PC9_epitope_Rep6 1038.61857875122 1038.61748993586 66.988 2 0.1576455489947698 0.0006540935353755587 0.002535207825965169 ['ENSG00000125826|ENST00000356286|RBCK1'] 26305 12695 FHLSSQSSL True PC9_epitope_Rep1 1004.49270953176 1004.49160993586 53.703 2 0.15763952301312986 0.0006540935353755587 0.002535560126086131 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 138619 9791 YIDSKFEDY True H1975_Epitope_Rep3 1178.5131701928199 1178.5120699358602 42.685 2 0.15763715116931137 0.0006540935353755587 0.002535698805834243 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 110609 17782 TFTFSHATF True PC9_epitope_Rep2 1057.4868958753298 1057.48578993586 73.688 2 0.15763142408015332 0.0006540935353755587 0.0025360336952137586 ['ENSG00000204713|ENST00000377199|TRIM27'] 106139 10983 STDLQDYTY True H1975_Epitope_Rep1 1104.46113461996 1104.4600299358601 47.212 2 0.1576307494676308 0.0006540935353755587 0.0025360731458327034 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 140784 7805 YSDKEFAGSY True H1975_Epitope_Rep2 1165.49276910141 1165.49166993586 34.97 2 0.15762976643227397 0.0006540935353755587 0.00253613063378576 ['ENSG00000109436|ENST00000442267|TBC1D9', 'TBC1D9|p.G735Efs*4|1|0.16|ENSG00000109436|chr4:140657530-140657530|C/-|frameshift_variant', 'ENST00000514787.1_1_4:141591792-141598206:-|nuORF'] 69697 7059 LVEEELDR True NCI_RA007_Epitope_Rep1 1001.5029398622898 1001.50184993586 31.453 2 0.15761547479630658 0.0006540935353755587 0.0025369665562357314 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'TPM2|p.Q103L|1|0.19|ENSG00000198467|chr9:35685713-35685713|T/A|missense_variant', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 68330 16227 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.52277496793 67.627 1 0.15761138364778515 0.0006540935353755587 0.0025372058994698682 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 1173 6119 AEAPSPAPTP True H1975_Epitope_Rep2 936.4552613938799 936.45416993586 28.515 2 0.15760606283930834 0.0006540935353755587 0.0025375172148462953 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 99194 19176 SHLDYDITL True PC9_epitope_Rep3 1075.5185899264302 1075.51748993586 78.979 2 0.15760440042359328 0.0006540935353755587 0.0025376144890039715 ['ENSG00000163960|ENST00000296328|UBXN7'] 29535 21779 FVHDLVLYL True PC9_epitope_Rep5 1117.6171817688898 1117.6160899358601 88.804 2 0.15758870690314458 0.0006540935353755587 0.0025385329589675603 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 96750 20505 SAMEVVPAL True PC9_epitope_Rep3 915.4735543103099 915.47244993586 84.133 2 0.15758768132876233 0.0006540935353755587 0.0025385929926930303 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 68055 11924 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48127496793 50.946 1 0.157584419359444 0.0006540935353755587 0.0025387839469872557 ['ENSG00000174231|ENST00000304992|PRPF8'] 140701 14603 YSAAWAEYY True H1975_Epitope_Rep2 1122.46582607758 1122.4652749679299 61.329 1 0.15757924057379805 0.0006540935353755587 0.0025390871403397847 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP', 'ENST00000492724.1_1_1:78411324-78420943:-|nuORF', 'ENST00000487684.1_1_1:78414836-78421090:-|nuORF', 'ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1'] 48419 21268 IYVPDIRNVF True PC9_epitope_Rep2 1234.6710082469 1234.66990993586 87.267 2 0.1575769113411861 0.0006540935353755587 0.0025392235176505 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 118915 10252 VADLVENSY True H1975_Epitope_Rep3 1008.4763907612801 1008.47587496793 44.483 1 0.1575717938484547 0.0006540935353755587 0.0025395231741548903 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 11968 17894 DHNLLLYEA True PC9_epitope_Rep4 1086.53457434374 1086.53346993586 76.867 2 0.157570647867604 0.0006540935353755587 0.0025395902822847056 ['ENSG00000183751|ENST00000568546|TBL3'] 54686 21235 KYLTEGLLQF True PC9_epitope_Rep1 1210.65977485686 1210.6586699358602 86.504 2 0.15756358486648894 0.0006540935353755587 0.0025400039275656873 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 77375 12219 NSELSCQLY True H1975_Epitope_Rep3 1055.4593607981499 1055.45826993586 52.173 2 0.1575571797054839 0.0006540935353755587 0.0025403791045219477 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 3124 13723 AGAPAPLYL True H1975_Epitope_Rep2 871.4803539429099 871.47980496793 57.93 1 0.15755705395264868 0.0006540935353755587 0.0025403864709428034 ['ENSG00000130702|ENST00000252999|LAMA5'] 41220 13926 HVLDVIHEV True PC9_epitope_Rep4 1059.57129420563 1059.57018993586 61.47 2 0.1575532736779194 0.0006540935353755587 0.002540607923971802 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 43355 6216 IGAEVYHNLK True NCI_RA007_Epitope_Rep1 1142.60840799034 1142.60730993586 28.215 2 0.15755223655351996 0.0006540935353755587 0.002540668683331377 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 17627 16483 EHIPNSPFHVL True PC9_epitope_Rep2 1288.65642081192 1288.65478490379 68.643 3 0.1575500587994017 0.0006540935353755587 0.0025407962705722154 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 64783 20461 LQAPPLTSL True PC9_epitope_Rep1 938.5436824754601 938.54258993586 83.515 2 0.15753936819404957 0.0006540935353755587 0.0025414226896970627 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 75405 14377 NIVEKLREV True PC9_epitope_Rep3 1098.6397081186199 1098.6386099358601 60.394 2 0.15753673980996727 0.0006540935353755587 0.0025415767242306124 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 39583 12650 HLIGDFSKV True PC9_epitope_Rep2 1014.54983048506 1014.54872993586 53.966 2 0.15753122785944218 0.0006540935353755587 0.002541899778332933 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 132464 14533 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51767496793 61.059 1 0.15752689379649912 0.0006540935353755587 0.0025421538255065343 ['ENSG00000100220|ENST00000216038|RTCB'] 118956 11303 VADTVARVL True PC9_epitope_Rep4 942.5498304850598 942.54872993586 51.253 2 0.15751700797476903 0.0006540935353755587 0.0025427333916268864 ['ENSG00000145632|ENST00000274289|PLK2'] 28155 14630 FRDIAQQL True PC9_epitope_Rep3 989.5294293936499 989.52832993586 61.407 2 0.15751020286507253 0.0006540935353755587 0.002543132424573342 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 17622 15648 EHIPESPYL True PC9_epitope_Rep1 1083.52367530687 1083.52256993586 65.011 2 0.1575082832246522 0.0006540935353755587 0.0025432449983174127 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'FLNB|p.P2279L|1|0.08|ENSG00000136068|chr3:58156023-58156023|C/T|missense_variant'] 65233 15991 LQSDRVLYL True PC9_epitope_Rep4 1105.6131590176099 1105.61206993586 69.442 2 0.15750666039945263 0.0006540935353755587 0.002543340169763917 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4'] 21716 19053 ERSPLLFTL True PC9_epitope_Rep6 1074.60734536118 1074.6062499358602 85.931 2 0.15750520894213377 0.0006540935353755587 0.0025434252942611686 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 108763 19622 SYSMIVNNL True PC9_epitope_Rep4 1039.50083168731 1039.4997299358602 83.593 2 0.15749912685055614 0.0006540935353755587 0.002543782025295464 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 10060 11348 AYSRVQYQF True PC9_epitope_Rep6 1160.5614577979202 1160.56036993586 54.69 2 0.15749850093783335 0.0006540935353755587 0.002543818739594335 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 13391 11188 DLYLENPEIK True H1975_Epitope_Rep1 1232.6288686514001 1232.6277699358602 48.003 2 0.1574982201107763 0.0006540935353755587 0.002543835212300039 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 25786 9768 FEVTGQETVA True H1975_Epitope_Rep1 1079.51350454599 1079.51297496793 42.504 1 0.15749420854541374 0.0006540935353755587 0.0025440705336406827 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 138355 16382 YHFPDQQEL True PC9_epitope_Rep1 1175.52473793603 1175.52364993586 67.835 2 0.15749277207195128 0.0006540935353755587 0.0025441548035009067 ['ENSG00000165490|ENST00000533655|DDIAS', 'DDIAS|p.P901T|1|0.37|ENSG00000165490|chr11:82934039-82934039|C/A|missense_variant'] 28460 14029 FSDLYNEVY True H1975_Epitope_Rep3 1148.50260550912 1148.50207496793 59.284 1 0.15748194931803847 0.0006540935353755587 0.002544789803483992 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 15308 13294 EAFNMIDQNR True PC9_epitope_Rep3 1236.5557207944798 1236.55462993586 56.169 2 0.1574792278334848 0.0006540935353755587 0.0025449495051647762 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 27176 20426 FLLGPRLVLA True PC9_epitope_Rep4 1097.6961007959299 1097.69500993586 86.716 2 0.15747238361263038 0.0006540935353755587 0.0025453511807462096 ['ENSG00000170348|ENST00000303575|TMED10'] 92281 21485 RLLDLENIQI True PC9_epitope_Rep3 1225.70303665117 1225.70192993586 87.935 2 0.15744318149832412 0.0006540935353755587 0.0025470657137597994 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 131552 19219 VTLDNGIIRV True PC9_epitope_Rep1 1098.6397081186199 1098.6386099358601 78.723 2 0.15742699886511288 0.0006540935353755587 0.0025480163350514186 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75651254-75651557:-|nuORF', 'ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 105442 7760 SRTSIQSEL True PC9_epitope_Rep4 1019.52473793603 1019.52364993586 37.24 2 0.15742621625492487 0.0006540935353755587 0.002548062317132156 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 4624 9221 ALAAGGYDVEK True PC9_epitope_Rep1 1092.54513902744 1092.5440499358601 40.32 2 0.15742527540453422 0.0006540935353755587 0.0025481175976756745 ['ENSG00000184357|ENST00000331442|H1-5'] 7146 6102 AQYEDIANR True NCI_RA007_Epitope_Rep1 1078.5043368446197 1078.5032299358602 27.773 2 0.15742276289978277 0.0006540935353755587 0.0025482652281052956 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 93525 13428 RQLEDTVAL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 56.666 2 0.15741724173256477 0.0006540935353755587 0.0025485896723229005 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 47232 4671 IVAVTGAEAQK True H1975_Epitope_Rep3 1085.6080736371698 1085.6069699358602 23.09 2 0.15741345894312592 0.0006540935353755587 0.002548811986827586 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 106259 15024 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.55917496793 63.181 1 0.15741263303035594 0.0006540935353755587 0.0025488605282884295 ['ENSG00000131459|ENST00000253778|GFPT2'] 3975 14164 AHDTTLVAL True PC9_epitope_Rep3 939.50254593947 939.50144993586 59.567 2 0.15740381477018778 0.0006540935353755587 0.002549378862366964 ['ENSG00000134575|ENST00000672073|ACP2'] 109159 19564 TAMDVVYAL True PC9_epitope_Rep6 981.4841189940099 981.48302993586 87.917 2 0.15740077102987562 0.0006540935353755587 0.0025495577967197904 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 108669 20364 SYQKVIELF True PC9_epitope_Rep3 1125.6070110080097 1125.60647496793 83.579 1 0.15738607605552019 0.0006540935353755587 0.0025504218561367073 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 24425 12053 FADGHVLEL True H1975_Epitope_Rep1 999.5025459394699 999.50144993586 51.372 2 0.15738536709785308 0.0006540935353755587 0.002550463549991733 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 61101 20980 LIIDEIHLL True PC9_epitope_Rep4 1077.64339651673 1077.6422899358602 88.861 2 0.15737821198766408 0.0006540935353755587 0.00255088438065126 ['ENSG00000112249|ENST00000369162|ASCC3'] 134657 17910 VYSQIPAAVKL True PC9_epitope_Rep3 1187.6914093383098 1187.6903099358601 74.093 2 0.1573771814003928 0.0006540935353755587 0.002550945000761931 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 9702 18709 AYGHFSYEF True PC9_epitope_Rep1 1119.46616043075 1119.4650699358601 76.753 2 0.15737105462852066 0.0006540935353755587 0.0025513054129149746 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 133957 20873 VYILQPEVI True PC9_epitope_Rep4 1072.6168474157198 1072.61627496793 88.444 1 0.15737083417802966 0.0006540935353755587 0.0025513183820348555 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 41472 19011 HYLDTTTLI True PC9_epitope_Rep5 1075.55497543515 1075.5538699358601 78.151 2 0.15736787635413205 0.0006540935353755587 0.0025514923974131586 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 110949 10271 THAAQQILL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 50.189 2 0.1573654791086936 0.0006540935353755587 0.0025516334414005153 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 74463 10574 NEVTDYAIA True H1975_Epitope_Rep1 994.46074069714 994.4596499358599 45.626 2 0.15735232303719052 0.0006540935353755587 0.002552407628667191 ['ENSG00000076003|ENST00000264156|MCM6'] 106361 20590 STIAILNSV True PC9_epitope_Rep2 916.5229470308801 916.52184993586 84.631 2 0.15735056234345918 0.0006540935353755587 0.0025525112569150595 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 99888 15117 SILSNIHEV True PC9_epitope_Rep4 1010.53965972418 1010.53856993586 66.076 2 0.1573475234346115 0.0006540935353755587 0.0025526901262922226 ['ENSG00000165029|ENST00000374736|ABCA1'] 72081 5714 MEVKPSSVTA True H1975_Epitope_Rep2 1047.52704643515 1047.5259499358601 26.977 2 0.15734435086733237 0.0006540935353755587 0.0025528768761161323 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 78505 15753 NYPETLGRLLI True NCI_RA007_Epitope_Rep1 1287.7186867153098 1287.7175899358601 65.372 2 0.15734220709995134 0.0006540935353755587 0.002553003074439395 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 62037 15060 LLDSDEPLVY True H1975_Epitope_Rep1 1162.57577044938 1162.57517496793 63.179 1 0.15733981671506816 0.0006540935353755587 0.002553143797871039 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 139081 7486 YLDDPTVPR True H1975_Epitope_Rep1 1074.53457434374 1074.53346993586 33.791 2 0.15733534007104522 0.0006540935353755587 0.0025534073614884786 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153761151-153761283:-|nuORF'] 46640 6105 ITDKNSLAY True H1975_Epitope_Rep3 1023.52367530687 1023.5225699358599 28.496 2 0.1573289419393783 0.0006540935353755587 0.002553784100343369 ['ENSG00000163510|ENST00000410053|CWC22'] 92719 5375 RNVSTGDVNVE True NCI_RA007_Epitope_Rep1 1188.5734790335998 1188.5723899358602 24.987 2 0.15732014636608507 0.0006540935353755587 0.0025543020974283293 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 32404 13668 GFQNALIVR True PC9_epitope_Rep4 1016.5767139392399 1016.57560993586 60.466 2 0.15731768181072509 0.0006540935353755587 0.0025544472611212705 ['CON__P02769'] 4308 21313 AIIGGMFTV True PC9_epitope_Rep4 907.48372507119 907.48317496793 90.147 1 0.15731746857863757 0.0006540935353755587 0.002554459820997789 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 111525 20740 TIAEGLTLAQV True PC9_epitope_Rep2 1114.62338934814 1114.6228749679299 85.216 1 0.15731365411085005 0.0006540935353755587 0.0025546845126249293 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 77273 12576 NSDELQELY True H1975_Epitope_Rep1 1109.48768372097 1109.4865899358601 53.42 2 0.1573058757969046 0.0006540935353755587 0.002555142756147819 ['nc|ENSG00000160209|O00764-2|PDXK', 'PDXK|p.E67A|1|0.21|ENSG00000160209|chr21:43741724-43741724|A/C|missense_variant', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 118284 15460 TYLPTSPLL True NCI_RA007_Epitope_Rep3 1003.55899818643 1003.55790993586 68.368 2 0.15730441374794277 0.0006540935353755587 0.0025552288989425056 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 110934 17415 THAAEDIVYTL True PC9_epitope_Rep2 1231.6084675599898 1231.60736993586 72.245 2 0.1573041523219759 0.0006540935353755587 0.002555244302263845 ['ENSG00000075420|ENST00000415807|FNDC3B'] 68042 11490 LTDLEPATEY True H1975_Epitope_Rep3 1150.5393849406598 1150.5382899358601 49.318 2 0.15730414001375298 0.0006540935353755587 0.002555245027471488 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 121639 12229 VFIDKQTNL True PC9_epitope_Rep2 1076.5866099166 1076.58550993586 52.35 2 0.15729752027954788 0.0006540935353755587 0.002555635095821408 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 75721 20643 NLLAHFINA True PC9_epitope_Rep1 1011.55016483823 1011.54906993586 84.224 2 0.15729502219271932 0.0006540935353755587 0.00255578231122428 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 92896 20521 RPFTIPYLTA True PC9_epitope_Rep2 1177.64954452633 1177.64844993586 84.364 2 0.1572937498658993 0.0006540935353755587 0.002555857294298993 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8', 'nc|ENSG00000137413|Q7Z7C8-4|TAF8', 'TAF8-CRISP1|1|fusion', 'TAF8-CRISP1|2|fusion'] 140802 8821 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.48097496793 38.896 1 0.1572805518362552 0.0006540935353755587 0.002556635234064854 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 102475 23330 SLVELLNQI True PC9_epitope_Rep5 1027.5913609438699 1027.59026993586 94.72 2 0.15727997640705793 0.0006540935353755587 0.0025566691573255937 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 94890 6876 RTDPVVADY True H1975_Epitope_Rep3 1034.50327421546 1034.5021699358601 31.407 2 0.15727775555064713 0.0006540935353755587 0.0025568000876215395 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 7575 8227 ASETLQSPGY True H1975_Epitope_Rep2 1051.48220441771 1051.48110993586 36.596 2 0.15727386154522968 0.0006540935353755587 0.002557029674348352 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1'] 116776 12317 TVDRVVLLY True H1975_Epitope_Rep2 1076.62299542532 1076.62188993586 52.461 2 0.15727168536429714 0.0006540935353755587 0.0025571579887957623 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 115081 16373 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61278993586 68.115 2 0.15726904813549417 0.0006540935353755587 0.002557313496682605 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 53858 14743 KTIEDDLVSA True PC9_epitope_Rep1 1089.55536935797 1089.55426993586 61.528 2 0.15726706621156217 0.0006540935353755587 0.00255743036981203 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 45795 9983 ISDAIPELK True NCI_RA007_Epitope_Rep1 984.54916177872 984.54806993586 42.836 2 0.1572633626694927 0.0006540935353755587 0.0025576487802467756 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2'] 142686 12801 YYPSTPGRYSI True PC9_epitope_Rep6 1302.6244519773 1302.62334993586 60.738 2 0.1572533767614404 0.0006540935353755587 0.0025582377758729294 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 17674 16598 EHLQVITTL True PC9_epitope_Rep2 1052.5866099166 1052.58550993586 69.086 2 0.1572515929380621 0.0006540935353755587 0.0025583430048066146 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 22222 9903 ESYSIYVYK True H1975_Epitope_Rep3 1150.55464108198 1150.55354993586 43.123 2 0.15725109019230513 0.0006540935353755587 0.0025583726628951886 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 89471 17508 QYFPKAPEF True PC9_epitope_Rep2 1125.5494961318898 1125.54838993586 72.602 2 0.1572454603316034 0.0006540935353755587 0.002558704804314816 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 18141 18898 EIITIIHQV True PC9_epitope_Rep1 1064.6229954253201 1064.62188993586 77.476 2 0.1572442611133453 0.0006540935353755587 0.0025587755594140083 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 125992 13505 VLDPYLLKY True H1975_Epitope_Rep3 1122.63249747986 1122.6319749679299 57.224 1 0.15723858710890445 0.0006540935353755587 0.0025591103579332163 ['ENSG00000239789|ENST00000285298|MRPS17'] 140796 8574 YSDKYGLGY True H1975_Epitope_Rep1 1064.48147614172 1064.48097496793 37.906 1 0.1572334401190226 0.0006540935353755587 0.0025594140974115644 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 97264 8561 SEAEKVYIV True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 37.883 2 0.15722566760517437 0.0006540935353755587 0.002559872845206886 ['ENSG00000075914|ENST00000265564|EXOSC7'] 111211 11535 THISDTSVVL True PC9_epitope_Rep6 1070.56078909158 1070.5596899358602 55.457 2 0.15721967840760392 0.0006540935353755587 0.002560226394432568 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 33194 19587 GIYTGFIKV True PC9_epitope_Rep2 996.5644179200399 996.56332993586 80.724 2 0.1572191865723235 0.0006540935353755587 0.0025602554302002842 ['ENSG00000153179|ENST00000542104|RASSF3'] 54800 14975 KYPDIISRI True PC9_epitope_Rep2 1103.63389446219 1103.63278993586 62.858 2 0.15721599643749723 0.0006540935353755587 0.0025604437695522023 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 97449 13462 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.40686993586 56.915 2 0.15721550955549984 0.0006540935353755587 0.0025604725153339234 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 43695 15475 IHDNGEFYL True PC9_epitope_Rep4 1106.50327421546 1106.5021699358601 67.452 2 0.15721523555817693 0.0006540935353755587 0.0025604886924286414 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 28453 8363 FSDIVKQGY True H1975_Epitope_Rep2 1055.52876068731 1055.52766993586 37.12 2 0.15720713605564943 0.0006540935353755587 0.002560966941786604 ['ENSG00000125170|ENST00000340099|DOK4', 'ENST00000561918.1_1_16:57512562-57513515:-|nuORF'] 16293 8144 EEFQFIKKA True NCI_RA007_Epitope_Rep4 1138.60225998074 1138.60060490379 38.115 3 0.15720416308743812 0.0006540935353755587 0.0025611425082830595 ['ENSG00000140259|ENST00000267812|MFAP1'] 8520 7777 ATSVITIVK True NCI_RA007_Epitope_Rep3 930.57498260374 930.57388993586 37.715 2 0.15720174094516454 0.0006540935353755587 0.0025612855550296936 ['ENSG00000197063|ENST00000357736|MAFG'] 78401 22503 NYLLYVSNF True PC9_epitope_Rep3 1131.5600608155898 1131.5589699358602 91.833 2 0.15719877946947133 0.0006540935353755587 0.0025614604645339527 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 115091 16148 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61278993586 67.1 2 0.15719803338356458 0.0006540935353755587 0.002561504531443972 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 89389 19061 QYAGKYVLF True PC9_epitope_Rep5 1087.57023157647 1087.56912993586 78.347 2 0.15719486307762068 0.0006540935353755587 0.0025616917912231188 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 21181 6018 ERDM[Oxidation]SNVSL True PC9_epitope_Rep2 1065.47607387189 1065.4749699358601 28.538 2 0.15719249401953575 0.0006540935353755587 0.00256183173278603 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 15408 19253 EAITHLLGV True PC9_epitope_Rep2 951.5389314481898 951.53782993586 79.43 2 0.15718230767675231 0.0006540935353755587 0.002562433532580887 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 92946 19894 RPGTAFELLEA True PC9_epitope_Rep5 1202.62953735774 1202.62844993586 81.574 2 0.15717719243209047 0.0006540935353755587 0.002562735789754915 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 133609 19525 VYADKLLNI True PC9_epitope_Rep1 1047.59644632431 1047.5953499358602 79.923 2 0.15717027835091263 0.0006540935353755587 0.0025631443958014787 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2', 'ENST00000560620.1_1_15:44806831-44810879:+|nuORF'] 62377 18998 LLGPRLVLA True PC9_epitope_Rep2 950.6276868829399 950.62658993586 78.442 2 0.15716968285848817 0.0006540935353755587 0.002563179591053463 ['ENSG00000170348|ENST00000303575|TMED10'] 142763 18644 YYQSSVQYL True PC9_epitope_Rep1 1149.5342399905699 1149.5331499358601 76.503 2 0.15716896767435426 0.0006540935353755587 0.0025632218610544813 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 28259 19164 FRMDIEQSL True PC9_epitope_Rep2 1137.54884450889 1137.54774993586 79.087 2 0.15716881768210023 0.0006540935353755587 0.0025632307262341476 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 40547 11956 HRFPTVAV True PC9_epitope_Rep3 925.5133854066898 925.5122899358599 51.011 2 0.15716710891113203 0.0006540935353755587 0.0025633317240204194 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 105017 16438 SRDLFTYTV True PC9_epitope_Rep6 1100.55022440788 1100.54912993586 75.637 2 0.15716010115680812 0.0006540935353755587 0.0025637459624825855 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 95729 15265 RYGLVTNEI True PC9_epitope_Rep5 1063.56620882519 1063.5651099358602 63.726 2 0.15715990845578 0.0006540935353755587 0.0025637573542618957 ['ENSG00000115267|ENST00000649979|IFIH1'] 75845 9703 NLPLPPPPPPR True H1975_Epitope_Rep3 1193.6920780446499 1193.6909899358602 42.345 2 0.15715631590241796 0.0006540935353755587 0.0025639697421140097 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 111380 9216 THSDIQVKL True PC9_epitope_Rep3 1039.56620882519 1039.5651099358602 40.387 2 0.15715603932496863 0.0006540935353755587 0.0025639860938002526 ['ENSG00000105223|ENST00000409735|PLD3'] 71077 22202 LYLENIDEF True PC9_epitope_Rep1 1154.54955570154 1154.5484499358602 90.22 2 0.15715123408541512 0.0006540935353755587 0.0025642702036000812 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF', 'ENST00000527458.5_1_11:74303652-74303820:+|nuORF'] 1353 6422 AEEAARLSVAA True H1975_Epitope_Rep2 1086.56693710118 1086.5658499358601 29.622 2 0.15715088776202318 0.0006540935353755587 0.0025642906811851143 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 58904 11621 LETEVPVVA True H1975_Epitope_Rep1 955.5226126777098 955.5220649679301 49.69 1 0.1571507344880865 0.0006540935353755587 0.0025642997440962186 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 45568 16730 IQSDKFLNL True PC9_epitope_Rep4 1076.5866099166 1076.58550993586 72.32 2 0.15714337558757216 0.0006540935353755587 0.002564734905006495 ['ENSG00000136052|ENST00000258538|SLC41A2'] 111322 13014 THNIIVNQL True PC9_epitope_Rep2 1050.5821932425 1050.58108993586 55.342 2 0.1571391948036125 0.0006540935353755587 0.0025649821641333137 ['ENSG00000198356|ENST00000357332|GET3'] 8927 12070 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6965849037902 54.233 3 0.15712024747292805 0.0006540935353755587 0.002566103041778235 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 40155 19221 HQDNNFLYL True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 79.306 2 0.15711862089642614 0.0006540935353755587 0.002566199288836583 ['XPNPEP3|p.D217*|1|0.36|ENSG00000196236|chr22:40886370-40886371|-/T|frameshift_variant', 'nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 39430 6217 HKVPGDVSL True NCI_RA007_Epitope_Rep2 950.5185303567799 950.51742993586 28.79 2 0.15710953958014456 0.0006540935353755587 0.0025667367106336314 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 27854 8422 FQDNHGVTV True PC9_epitope_Rep1 1015.4723084403499 1015.47120993586 37.231 2 0.15709704813859074 0.0006540935353755587 0.002567476123201673 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 27835 10403 FQDEVAKAQQL True PC9_epitope_Rep6 1275.64591569787 1275.6448099358602 50.749 2 0.15708629740690383 0.0006540935353755587 0.002568112667193577 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 74154 9579 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.5032299358602 41.82 2 0.1570796345433057 0.0006540935353755587 0.002568507250158127 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 76890 9697 NRDLSTPGL True PC9_epitope_Rep2 971.5036085686299 971.50250993586 42.639 2 0.1570762608044673 0.0006540935353755587 0.0025687070701874604 ['ENSG00000131711|ENST00000296755|MAP1B'] 141066 10448 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 45.203 2 0.15706874526115924 0.0006540935353755587 0.0025691522570596755 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 54496 9995 KYIDQKFVL True NCI_RA007_Epitope_Rep4 1152.6542955536 1152.6531899358602 45.291 2 0.1570608183303054 0.0006540935353755587 0.0025696218961057593 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 2328 9207 AEPLEPTRPLP True H1975_Epitope_Rep2 1218.66083748602 1218.6597499358602 40.368 2 0.15705857361206985 0.0006540935353755587 0.002569754902274897 ['ENSG00000125966|ENST00000246186|MMP24'] 77572 11560 NTDPSIVM[Oxidation]TY True H1975_Epitope_Rep2 1155.51179067427 1155.51068993586 49.528 2 0.15705392576104396 0.0006540935353755587 0.002570030322982185 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 124172 3581 VGSTSENITQK True NCI_RA007_Epitope_Rep2 1162.5829810881398 1162.58188993586 18.578 2 0.15704426027390472 0.0006540935353755587 0.0025706031713174163 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y', 'DDX3X|p.V422Kfs*13|1|0.5|ENSG00000215301|chrX:41345494-41345497|TGGG/-|frameshift_variant'] 90012 8972 RDQIVTVSV True H1975_Epitope_Rep3 1015.56620882519 1015.56510993586 39.506 2 0.1570336481779275 0.0006540935353755587 0.002571232269449088 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 24279 12119 EYTLMRATF True NCI_RA007_Epitope_Rep3 1130.5430308524599 1130.54192993586 54.783 2 0.1570299857308248 0.0006540935353755587 0.0025714494194869777 ['ENSG00000185950|ENST00000375856|IRS2'] 93025 7063 RPLEPQPAP True PC9_epitope_Rep5 1003.5450794577899 1003.5439899358599 32.135 2 0.15702388732101413 0.0006540935353755587 0.0025718110407216984 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 84526 11853 QAQEVFFLK True NCI_RA007_Epitope_Rep5 1108.59169529704 1108.5905899358602 52.25 2 0.15702280817425313 0.0006540935353755587 0.0025718750368489587 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 104704 14758 SQVDRLVAL True PC9_epitope_Rep4 999.5712942056298 999.57018993586 64.699 2 0.15702223616078445 0.0006540935353755587 0.0025719089593361113 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 45741 9154 IRYPDSHQL True PC9_epitope_Rep5 1127.57235683479 1127.57071490379 40.157 3 0.15701585989332165 0.0006540935353755587 0.0025722871255063244 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 92892 12802 RPFQSLIHA True PC9_epitope_Rep5 1067.58761297611 1067.58650993586 54.254 2 0.15701410361831764 0.0006540935353755587 0.0025723912970988983 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 90317 9244 REFDGIGAV True NCI_RA007_Epitope_Rep3 962.4821448480598 962.48104993586 43.462 2 0.15701007277025986 0.0006540935353755587 0.002572630398503113 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC'] 104367 19959 SQITPHAIIFL True PC9_epitope_Rep4 1238.7023083751799 1238.70120993586 84.907 2 0.15700674666058356 0.0006540935353755587 0.002572827713013226 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 102028 5514 SLQSVAEER True NCI_RA007_Epitope_Rep5 1017.5090878718898 1017.50798993586 27.897 2 0.15700478735361495 0.0006540935353755587 0.0025729439518752235 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 77692 22959 NTIPLFVQL True PC9_epitope_Rep3 1043.60153170475 1043.6004299358601 93.576 2 0.1569981183961564 0.0006540935353755587 0.002573339637183054 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 106054 5105 STAAVGVLK True NCI_RA007_Epitope_Rep5 844.50181766348 844.50072993586 26.333 2 0.15698555472197012 0.0006540935353755587 0.0025740852351918623 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF'] 96718 19206 SALPDIKVLTL True PC9_epitope_Rep6 1168.7067250492798 1168.70562993586 86.528 2 0.15697789593055952 0.0006540935353755587 0.002574539856048063 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 1934 7981 AEILNGKEISA True H1975_Epitope_Rep3 1143.61355294043 1143.61244993586 35.669 2 0.1569778355456954 0.0006540935353755587 0.002574543440772491 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 69625 13157 LVDPSVYGY True H1975_Epitope_Rep2 1011.49131254943 1011.4907749679301 55.733 1 0.15696154877935292 0.0006540935353755587 0.0025755104803036628 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 3256 5317 AGFAGDDAPR True NCI_RA007_Epitope_Rep1 975.4410083120698 975.43990993586 24.76 2 0.15696012441196666 0.0006540935353755587 0.002575595070468812 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 49847 8072 KIDEHHFVAV True PC9_epitope_Rep2 1193.6193070272102 1193.61766490379 36.408 3 0.15695868107309224 0.0006540935353755587 0.0025756807901385196 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 118306 20708 TYLSIIHSL True PC9_epitope_Rep3 1045.58079626017 1045.5796899358602 84.929 2 0.1569555928630988 0.0006540935353755587 0.0025758642080084626 ['ENSG00000133030|ENST00000651222|MPRIP'] 142590 17626 YYLTDVDRI True PC9_epitope_Rep4 1156.5764391557198 1156.57534993586 75.819 2 0.15695220475032645 0.0006540935353755587 0.002576065452979848 ['ENSG00000088256|ENST00000078429|GNA11'] 96236 10074 RYQDIIHSI True NCI_RA007_Epitope_Rep1 1143.6036569630699 1143.60254993586 43.195 2 0.15694376955086295 0.0006540935353755587 0.002576566549758839 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 132875 21282 VVLPLELKL True PC9_epitope_Rep2 1022.6739683690199 1022.6728699358599 87.324 2 0.15694167739740347 0.0006540935353755587 0.0025766908501197224 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 27596 10147 FNPFVTSDR True NCI_RA007_Epitope_Rep4 1081.51925863277 1081.5181699358602 45.889 2 0.1569276357509371 0.0006540935353755587 0.0025775252562755912 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 37677 10254 GVYGDVQRV True PC9_epitope_Rep3 991.5086939490699 991.50758993586 44.392 2 0.15692188535456628 0.0006540935353755587 0.002577867043742263 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 73207 20161 MRYVASYLLA True PC9_epitope_Rep1 1185.6216155263298 1185.6205099358601 82.378 2 0.15691969913900058 0.0006540935353755587 0.0025779969981420603 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 72871 9604 MPQSGTGVSV True PC9_epitope_Rep6 961.45388149489 961.45278993586 47.262 2 0.1569178416027311 0.0006540935353755587 0.0025781074201174023 ['ENSG00000115233|ENST00000409682|PSMD14'] 136121 20603 WRPEEGFVEL True PC9_epitope_Rep5 1260.6138872935996 1260.61278993586 84.298 2 0.15691644099114418 0.0006540935353755587 0.002578190683145897 ['ENSG00000182173|ENST00000333213|TSEN54', 'nc|ENSG00000182173|Q7Z6J9-2|TSEN54', 'ENST00000583454.1_1_17:73512940-73513526:+|nuORF'] 92779 19483 RPADVIFATV True PC9_epitope_Rep5 1087.60259433391 1087.6014899358602 79.994 2 0.15691481280188932 0.0006540935353755587 0.002578287478498385 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 138430 15970 YHISLEHEIL True PC9_epitope_Rep4 1252.64518742188 1252.6435349037902 69.358 3 0.15691254517873834 0.0006540935353755587 0.0025784222940423533 ['ENSG00000168002|ENST00000301788|POLR2G'] 115467 16229 TRNDIVNML True PC9_epitope_Rep4 1074.54917886206 1074.5480899358602 70.366 2 0.15690744100771906 0.0006540935353755587 0.0025787257747832675 ['ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18', 'ENST00000465772.5_1_10:27793310-27827017:+|nuORF'] 9912 19173 AYLPEWKENI True PC9_epitope_Rep2 1261.6342883850098 1261.6331899358602 79.121 2 0.15689901513097396 0.0006540935353755587 0.0025792268334993308 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 44981 13583 IPAPPLSKV True PC9_epitope_Rep3 920.56950330048 920.56840993586 57.303 2 0.15689307102359845 0.0006540935353755587 0.0025795803681301333 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.L27M|1|0.25|ENSG00000148346|chr9:128149604-128149604|C/A|missense_variant'] 4349 18732 AILELDEHL True PC9_epitope_Rep4 1051.55497543515 1051.5538699358601 80.134 2 0.1568877969628774 0.0006540935353755587 0.0025798940912251053 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 4815 4809 ALEENNNFSK True NCI_RA007_Epitope_Rep1 1164.54111627616 1164.54000993586 22.787 2 0.15688771142227664 0.0006540935353755587 0.0025798991798500104 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2'] 40615 20299 HRIYVPLML True PC9_epitope_Rep1 1140.6477707045199 1140.64666993586 82.909 2 0.15688741932150888 0.0006540935353755587 0.0025799165563669636 ['ENSG00000140526|ENST00000352732|ABHD2', 'ENST00000568308.1_1_15:89728670-89736600:+|nuORF'] 14568 5947 DTTVGTLSQR True NCI_RA007_Epitope_Rep2 1076.5462016565998 1076.5451099358602 27.742 2 0.15688581387674674 0.0006540935353755587 0.0025800120632954258 ['ENSG00000103035|ENST00000219313|PSMD7'] 68628 20802 LTIDDGIFEV True PC9_epitope_Rep6 1120.56520576568 1120.56467496793 92.784 1 0.15688579257915483 0.0006540935353755587 0.0025800133302998755 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 94939 5887 RTIAPIIGR True NCI_RA007_Epitope_Rep3 995.6239984848298 995.62290993586 30.133 2 0.15688484755439783 0.0006540935353755587 0.0025800695509226685 ['ENSG00000096401|ENST00000371477|CDC5L', 'CDC5L|p.L387Cfs*9|1|0.66|ENSG00000096401|chr6:44419515-44419515|T/-|frameshift_variant'] 4108 9203 AHSESINVI True PC9_epitope_Rep4 968.4927095317599 968.49160993586 42.996 2 0.15687509313111725 0.0006540935353755587 0.0025806499243529414 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1'] 17699 6651 EHNDLQYAA True PC9_epitope_Rep2 1059.46213767947 1059.46104993586 30.99 2 0.1568731516393671 0.0006540935353755587 0.0025807654557192237 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 40939 21249 HSSVIFIF True PC9_epitope_Rep3 948.5069030439199 948.50580993586 87.027 2 0.15687157493733783 0.0006540935353755587 0.00258085928352589 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 43663 21301 IHDGFGFML True PC9_epitope_Rep3 1035.48478770035 1035.4836899358602 87.23 2 0.1568690563329876 0.0006540935353755587 0.0025810091699671072 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 31906 7630 GELVSNGV True H1975_Epitope_Rep2 773.39193286133 773.3913849679301 34.303 1 0.1568683976389476 0.0006540935353755587 0.0025810483714059345 ['ENST00000371478.2_1_5:132097291-132101152:-|nuORF', 'nc|ENSG00000164402|Q92599-3|SEPTIN8', 'nc|ENSG00000164402|Q92599-2|SEPTIN8', 'nc|ENSG00000164402|Q92599-4|SEPTIN8', 'ENSG00000164402|ENST00000378719|SEPTIN8'] 127289 16676 VMAPRTVLL True PC9_epitope_Rep3 998.5946725024999 998.59356993586 69.281 2 0.15686778691536127 0.0006540935353755587 0.0025810847184676877 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 61904 7475 LLDEHHISY True H1975_Epitope_Rep2 1125.54547338061 1125.54382490379 33.7 3 0.15686558072932777 0.0006540935353755587 0.0025812160233337107 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 3592 4851 AGNISDPGLQK True H1975_Epitope_Rep3 1098.5669371011797 1098.5658499358601 23.785 2 0.1568631679299843 0.0006540935353755587 0.0025813596327687394 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 77823 15534 NVDFDAPLGY True H1975_Epitope_Rep2 1109.5029398622898 1109.50184993586 64.906 2 0.15685140603570774 0.0006540935353755587 0.00258205981302538 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 77102 15167 NRLTFASTL True PC9_epitope_Rep2 1021.55564414149 1021.55454993586 63.597 2 0.15685034678071616 0.0006540935353755587 0.002582122879298117 ['ENSG00000047315|ENST00000314595|POLR2B'] 8923 14122 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6965849037902 59.406 3 0.15685029252366187 0.0006540935353755587 0.0025821261097138783 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 83259 9027 PTAEDNLEY True H1975_Epitope_Rep2 1050.4505699362599 1050.4494699358602 39.674 2 0.15684915147310946 0.0006540935353755587 0.0025821940477621656 ['ENSG00000099942|ENST00000354336|CRKL'] 140376 9786 YRDPYTGQSV True PC9_epitope_Rep6 1184.5462016566 1184.5451099358602 48.092 2 0.1568486216162496 0.0006540935353755587 0.002582225595998855 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 97332 4192 SEAPPTNQATA True H1975_Epitope_Rep2 1085.49891711101 1085.4978299358602 21.232 2 0.1568441831923809 0.0006540935353755587 0.0025824898795457933 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 28023 10179 FQPEANPSHL True PC9_epitope_Rep2 1138.54072235334 1138.5396299358601 44.493 2 0.15684247636457585 0.0006540935353755587 0.0025825915188688576 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'ENST00000261509.10_1_4:169846154-169847533:+|nuORF'] 115302 10501 TRHPENWTL True PC9_epitope_Rep1 1152.56760580752 1152.56596490379 45.283 3 0.15684216162150963 0.0006540935353755587 0.0025826102618352427 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 114896 15046 TQSELATAL True PC9_epitope_Rep2 932.4814761417199 932.48036993586 63.133 2 0.15684135735847402 0.0006540935353755587 0.0025826581563584868 ['ENSG00000138629|ENST00000395081|UBL7'] 114933 11034 TQTAVITRI True PC9_epitope_Rep5 1001.5869442697699 1001.58584993586 47.432 2 0.1568371129163984 0.0006540935353755587 0.002582910931045582 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 7885 6454 ATAGIIGVNR True NCI_RA007_Epitope_Rep3 970.5559784946599 970.55488993586 32.412 2 0.15683339706392552 0.0006540935353755587 0.002583132246226454 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 121792 11082 VFPDKGYSF True NCI_RA007_Epitope_Rep5 1058.5072969667401 1058.5061899358602 49.261 2 0.1568317537127273 0.0006540935353755587 0.0025832301298195515 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 90924 11274 REYQDLLNV True NCI_RA007_Epitope_Rep3 1148.5825871653199 1148.5814899358602 51.459 2 0.15682971722893893 0.0006540935353755587 0.0025833514348635287 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 2439 11633 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.50618993586 49.815 2 0.15682277373391326 0.0006540935353755587 0.002583765073308978 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 69582 16455 LVDLAPLGY True H1975_Epitope_Rep1 959.5327834385898 959.5322349679301 68.657 1 0.1568198352483803 0.0006540935353755587 0.002583940144907561 ['nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 25354 8998 FEADPPGQV True H1975_Epitope_Rep3 958.4396113297399 958.43850993586 39.607 2 0.15681847003392618 0.0006540935353755587 0.002584021486846444 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 76548 18092 NQITQLESL True PC9_epitope_Rep6 1044.54513902744 1044.5440499358601 82.227 2 0.15681841175781167 0.0006540935353755587 0.0025840249590992925 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 105011 12972 SRDKTIIMW True PC9_epitope_Rep6 1148.60121443492 1148.60010993586 61.464 2 0.1568107559894196 0.0006540935353755587 0.0025844811515373842 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 115856 7925 TSDYVSQSY True H1975_Epitope_Rep3 1048.43491987212 1048.43437496793 35.453 1 0.15680783041223378 0.0006540935353755587 0.002584655502248096 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 96323 18068 RYSNLILNLF True NCI_RA007_Epitope_Rep4 1251.69755734791 1251.69646993586 78.186 2 0.15680078234644435 0.0006540935353755587 0.0025850755821859367 ['ENSG00000078142|ENST00000262039|PIK3C3', 'ENST00000587328.2_1_18:39644671-39661098:+|nuORF'] 76675 16772 NQSEKIFSL True PC9_epitope_Rep3 1064.55022440788 1064.54912993586 69.66 2 0.15680052114037457 0.0006540935353755587 0.002585091151940771 ['ENSG00000130818|ENST00000253115|ZNF426'] 53934 8699 KTQTIFLKY True NCI_RA007_Epitope_Rep4 1140.6542955536 1140.6531899358602 40.251 2 0.15679097431593397 0.0006540935353755587 0.002585660275349408 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 14737 9843 DVNAAIATIK True NCI_RA007_Epitope_Rep1 1014.57095985246 1014.56986993586 42.288 2 0.15679079182861944 0.0006540935353755587 0.002585671155347045 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 138528 20540 YHVDSLLQL True PC9_epitope_Rep3 1086.57095985246 1086.5698699358602 84.27 2 0.15678932582980484 0.0006540935353755587 0.002585758560688952 ['ENSG00000141002|ENST00000263346|TCF25'] 105162 9992 SRFPQGAQL True PC9_epitope_Rep4 1002.5246783663797 1002.52358993586 46.093 2 0.15678923001642833 0.0006540935353755587 0.002585764273348011 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 71147 21235 LYLPTLTHF True PC9_epitope_Rep5 1103.6015317047502 1103.6004299358601 86.73 2 0.15678659474178996 0.0006540935353755587 0.0025859214006622618 ['ENST00000537473.2_1_12:57058103-57058217:-|nuORF'] 9973 21360 AYPEYLITY True PC9_epitope_Rep3 1131.54882742555 1131.5477299358602 87.459 2 0.1567831594163607 0.0006540935353755587 0.0025861262450258132 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 90715 13536 REQQLISAVFP True H1975_Epitope_Rep1 1286.6982856238997 1286.69718993586 57.187 2 0.1567774568205984 0.0006540935353755587 0.0025864663197665907 ['ENST00000577961.5_1_18:756649-756733:-|nuORF', 'ENST00000418510.1_1_22:26043331-26044389:+|nuORF'] 25764 5821 FETLQAQAGK True H1975_Epitope_Rep3 1091.5611234447497 1091.56002993586 27.411 2 0.15677292129918718 0.0006540935353755587 0.002586736827796105 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 47863 11001 IYIAGHPAF True NCI_RA007_Epitope_Rep2 987.51780208079 987.51670993586 47.401 2 0.156772562667466 0.0006540935353755587 0.002586758218550011 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 1592 5737 AEFAERTVA True H1975_Epitope_Rep3 992.4927095317599 992.49160993586 27.097 2 0.15676799183730275 0.0006540935353755587 0.002587030863277654 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 78498 20032 NYNQHAMVFF True PC9_epitope_Rep1 1269.5600778989299 1269.5589899358602 81.88 2 0.15676085406000353 0.0006540935353755587 0.0025874566807821448 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 29033 8815 FTEQYNEQY True H1975_Epitope_Rep1 1220.4985827578398 1220.4974899358601 38.829 2 0.15675985871840015 0.0006540935353755587 0.002587516065309894 ['ENSG00000173914|ENST00000310046|RBM4B'] 88964 18575 QVIEELFKA True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 79.525 2 0.156751754517476 0.0006540935353755587 0.0025879996324843888 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 8703 3943 AVAPPTPASK True NCI_RA007_Epitope_Rep4 937.5232813840499 937.52218993586 21.404 2 0.15674317339648472 0.0006540935353755587 0.0025885117551521365 ['ENSG00000173894|ENST00000310942|CBX2'] 27842 8505 FQDGTKATF True PC9_epitope_Rep2 1013.4818104948899 1013.48070993586 38.079 2 0.15674181722764982 0.0006540935353755587 0.0025885927007770508 ['ENSG00000110711|ENST00000279146|AIP'] 106294 10739 STFNVFVGK True NCI_RA007_Epitope_Rep5 997.5232813840498 997.52218993586 47.945 2 0.1567294177954876 0.0006540935353755587 0.0025893329025862273 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 109733 4422 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 22.117 2 0.15672768232245354 0.0006540935353755587 0.002589436520974397 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 8992 9165 AVGLVLPAK True NCI_RA007_Epitope_Rep4 866.5589386167799 866.55784993586 42.094 2 0.1567265711795198 0.0006540935353755587 0.0025895028651975113 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 87477 9701 QQDPQQYNV True PC9_epitope_Rep5 1118.49925146418 1118.49814993586 42.283 2 0.1567237505420182 0.0006540935353755587 0.002589671287695057 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 110424 10173 TEYGIGVSA True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 44.133 1 0.1567082904000599 0.0006540935353755587 0.002590594619165499 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 49181 5790 KEMEKSFEV True H1975_Epitope_Rep3 1125.5376111188498 1125.53596490379 27.295 3 0.15670773579757563 0.0006540935353755587 0.00259062774798638 ['ENSG00000091527|ENST00000264993|CDV3'] 75025 11823 NHSDYNMVL True PC9_epitope_Rep6 1091.47059418819 1091.46948993586 56.683 2 0.1567074191806451 0.0006540935353755587 0.0025906466610836035 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 105100 5095 SREESAGPAL True PC9_epitope_Rep2 1015.4934378077497 1015.49234993586 24.974 2 0.15669619243362234 0.0006540935353755587 0.0025913173793422426 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 26410 21562 FHYIFNVQL True PC9_epitope_Rep5 1179.6076797143498 1179.60658993586 87.977 2 0.15669438259301263 0.0006540935353755587 0.0025914255206583225 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3', 'ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 38359 9245 HEIKSELL True PC9_epitope_Rep2 967.5338460677499 967.53274993586 40.899 2 0.15669327576455203 0.0006540935353755587 0.0025914916579202665 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 90088 7000 REAEIYQTV True NCI_RA007_Epitope_Rep3 1107.5560380643099 1107.5549499358601 34.644 2 0.15668035693410864 0.0006540935353755587 0.002592263732342193 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ACVR1C|p.W232L|1|0.29|ENSG00000123612|chr2:157550242-157550242|C/A|missense_variant', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 74890 10498 NHHMQSISF True PC9_epitope_Rep1 1099.4869129586702 1099.48580993586 45.27 2 0.15667541788194725 0.0006540935353755587 0.002592558967990438 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 71741 11109 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43227496793 47.765 1 0.15665939043917326 0.0006540935353755587 0.0025935172518355555 ['ENSG00000026025|ENST00000544301|VIM'] 112619 10880 TLETVPLER True PC9_epitope_Rep4 1056.5815245361598 1056.5804299358601 49.615 2 0.15665930420129806 0.0006540935353755587 0.0025935224089703116 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 8922 14025 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6965849037902 59.034 3 0.15665630150038276 0.0006540935353755587 0.002593701980689547 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 132379 17790 VVAELLRTV True PC9_epitope_Rep2 998.61243074162 998.61132993586 73.72 2 0.15665579787305184 0.0006540935353755587 0.0025937321005303385 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 90139 6276 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 29.084 2 0.1566524165335812 0.0006540935353755587 0.002593934333316244 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 1909 9495 AEIISEIRA True H1975_Epitope_Rep1 1000.55530978832 1000.55420993586 41.443 2 0.15664751365733132 0.0006540935353755587 0.0025942275948552885 ['ENSG00000111331|ENST00000228928|OAS3'] 88569 12740 QTDIQGALSAY True H1975_Epitope_Rep2 1165.5615173675699 1165.56097496793 54.108 1 0.1566467709883797 0.0006540935353755587 0.002594272019877139 ['ENSG00000198730|ENST00000361367|CTR9'] 8688 8727 AVALPLQTK True NCI_RA007_Epitope_Rep2 939.57531695691 939.57420993586 38.591 2 0.15664473673237952 0.0006540935353755587 0.0025943937090281014 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 92115 13622 RLASYLDKV True PC9_epitope_Rep5 1063.60259433391 1063.6014899358602 57.42 2 0.15663988942681012 0.0006540935353755587 0.0025946836977001056 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 45474 20801 IQLPSEKAIFL True PC9_epitope_Rep5 1257.7332741502898 1257.7321699358602 85.06 2 0.15663748142229617 0.0006540935353755587 0.002594827767906469 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 15046 22989 DYNFVFTSF True PC9_epitope_Rep4 1138.49712620586 1138.4960299358602 96.646 2 0.1566298744554631 0.0006540935353755587 0.002595282942945669 ['ENSG00000123505|ENST00000368885|AMD1', 'nc|ENSG00000123505|P17707-2|AMD1'] 142620 13800 YYNGKWEFL True NCI_RA007_Epitope_Rep3 1218.5709598524597 1218.5698699358602 61.608 2 0.1566296930012723 0.0006540935353755587 0.0025952938015204813 ['ENSG00000144843|ENST00000357003|ADPRH'] 89522 14628 QYLGQIQHI True PC9_epitope_Rep1 1098.5821932425 1098.58108993586 61.089 2 0.1566284059421343 0.0006540935353755587 0.002595370822965779 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 65271 13201 LQVEEVHQL True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 55.785 2 0.15662201220468175 0.0006540935353755587 0.002595753477032103 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 1082 11900 AEAIPEPVV True H1975_Epitope_Rep2 923.49639792987 923.4958449679301 50.853 1 0.15660988377348387 0.0006540935353755587 0.002596479497221443 ['JADE2|p.D663Afs*5|1|0.16|ENSG00000043143|chr5:134578932-134578932|A/-|frameshift_variant', 'nc|ENSG00000043143|Q9NQC1-2|JADE2', 'nc|ENSG00000043143|Q9NQC1|JADE2', 'ENSG00000043143|ENST00000681547|JADE2', 'JADE2|p.R260Afs*9|1|0.21|ENSG00000043143|chr5:134562289-134562290|-/A|frameshift_variant', 'nc|ENSG00000043143|Q9NQC1-3|JADE2'] 14846 17112 DVVLTQTPLSL True NCI_RA007_Epitope_Rep4 1184.6652541601197 1184.66414993586 74.137 2 0.1566098677816949 0.0006540935353755587 0.0025964804546398873 ['CON__Q05B55'] 30184 16564 FYQPKIQQF True PC9_epitope_Rep2 1197.61824439805 1197.6171499358602 68.95 2 0.15660918482724373 0.0006540935353755587 0.002596521343026163 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 95702 20396 RYFLPPYTF True PC9_epitope_Rep4 1202.6124307416196 1202.61132993586 86.601 2 0.15660548112726289 0.0006540935353755587 0.0025967430942091282 ['ENSG00000023608|ENST00000216294|SNAPC1'] 133641 17731 VYAILTHGI True PC9_epitope_Rep2 985.5596668927699 985.55856993586 73.483 2 0.15659629222540972 0.0006540935353755587 0.0025972933418239143 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 74467 10731 NEVTDYAIA True H1975_Epitope_Rep3 994.46074069714 994.4596499358599 46.355 2 0.15659400508004168 0.0006540935353755587 0.002597430318194886 ['ENSG00000076003|ENST00000264156|MCM6'] 109661 6747 TEAQEVVEA True H1975_Epitope_Rep2 974.4556553166998 974.4551049679301 30.867 1 0.15659104615152736 0.0006540935353755587 0.0025976075381281324 ['ENST00000468290.1_1_9:136198707-136199617:-|nuORF', 'ENSG00000148296|ENST00000372022|SURF6'] 137854 5737 YESLTDPSK True NCI_RA007_Epitope_Rep2 1038.48695544498 1038.4858499358602 26.931 2 0.15658828955492218 0.0006540935353755587 0.002597772650595052 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 135110 9579 WEEETVPTT True H1975_Epitope_Rep2 1090.4818700645399 1090.48076993586 41.82 2 0.15658488075119986 0.0006540935353755587 0.002597976842934892 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 41085 7744 HTQGPVDGSLY True H1975_Epitope_Rep2 1172.5462016565998 1172.5451099358602 34.741 2 0.15658414018811911 0.0006540935353755587 0.0025980212058664296 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 47880 20225 IYIDRFEDL True PC9_epitope_Rep5 1182.5920892198599 1182.59098993586 82.842 2 0.1565835496815182 0.0006540935353755587 0.002598056580307455 ['ENSG00000152219|ENST00000282032|ARL14EP'] 114590 12993 TQDGTPITV True PC9_epitope_Rep5 930.4658260775799 930.46472993586 54.987 2 0.15658256969051496 0.0006540935353755587 0.0025981152879665736 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 71614 4540 [Acetylation]-M[Oxidation]DKNELVQK True NCI_RA007_Epitope_Rep2 1161.5699745730296 1161.5688699358602 22.288 2 0.15658203322385505 0.0006540935353755587 0.0025981474262730467 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF'] 134292 18534 VYNPVIYVF True NCI_RA007_Epitope_Rep4 1112.5906326678798 1112.5895299358601 80.202 2 0.15657413109660273 0.0006540935353755587 0.00259862086788677 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 110936 16679 THAAEDIVYTL True PC9_epitope_Rep4 1231.6084675599898 1231.60736993586 72.131 2 0.15657043564809242 0.0006540935353755587 0.002598842303517177 ['ENSG00000075420|ENST00000415807|FNDC3B'] 104465 20780 SQLPPLREIIL True PC9_epitope_Rep2 1277.77072228817 1277.7696299358602 85.372 2 0.1565679956841156 0.0006540935353755587 0.002598988519353596 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 140009 5198 YQDTHPERL True PC9_epitope_Rep3 1157.5465360097699 1157.54488490379 25.076 3 0.1565654694875988 0.0006540935353755587 0.0025991399113584022 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 95225 20983 RVLELIPQI True PC9_epitope_Rep5 1079.6702799709099 1079.66918993586 85.772 2 0.15655934809471217 0.0006540935353755587 0.002599506795773909 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1', 'ENST00000404284.6_1_22:35717823-35727385:+|nuORF'] 32836 19678 GHMPVPIPSL True PC9_epitope_Rep2 1046.55828699378 1046.5571899358602 81.078 2 0.15655359859741494 0.0006540935353755587 0.0025998514377626844 ['ENSG00000111145|ENST00000228741|ELK3', 'ENST00000549529.1_1_12:96649292-96660955:+|nuORF'] 8183 9533 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51227496793 41.676 1 0.15655335103584517 0.0006540935353755587 0.0025998662783640928 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 48200 20918 IYPTTYVQF True PC9_epitope_Rep2 1130.56481184286 1130.56370993586 85.907 2 0.15655180871969107 0.0006540935353755587 0.0025999587376685763 ['ENSG00000179820|ENST00000391770|MYADM'] 89588 11611 QYNPKFQTL True PC9_epitope_Rep4 1137.58185888933 1137.5807699358602 52.422 2 0.1565495591011933 0.0006540935353755587 0.002600093604462254 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 86519 15749 QLANEEIAQV True PC9_epitope_Rep5 1113.56660274801 1113.56550993586 65.577 2 0.15654871936499715 0.0006540935353755587 0.002600143949244335 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF'] 108804 5585 SYTSGPGSRI True NCI_RA007_Epitope_Rep4 1023.49852318819 1023.4974299358599 28.084 2 0.15654625713164602 0.0006540935353755587 0.0026002915733559914 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 41123 17314 HTVGELIEV True PC9_epitope_Rep3 995.5287606873098 995.52766993586 71.773 2 0.1565430760209384 0.0006540935353755587 0.0026004823104070246 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 132601 20531 VVFEIQGTTV True PC9_epitope_Rep2 1091.58627556343 1091.5851699358602 84.405 2 0.15654190601088477 0.0006540935353755587 0.002600552466857929 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 45689 17181 IRKPYIWEY True PC9_epitope_Rep5 1266.67609362734 1266.6744449037901 71.108 3 0.15654088719359963 0.0006540935353755587 0.002600613558986415 ['ENSG00000136628|ENST00000366923|EPRS1'] 60876 19674 LHYGLPVVV True PC9_epitope_Rep2 995.5804023373499 995.57930993586 81.063 2 0.1565396327308532 0.0006540935353755587 0.0026006887832729325 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 137687 6429 YEKEGEFVA True H1975_Epitope_Rep2 1070.4920408254197 1070.49147496793 29.649 1 0.15653613853740028 0.0006540935353755587 0.002600898325221046 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 76439 15685 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 65.154 2 0.15653383316282535 0.0006540935353755587 0.002601036584568775 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 106829 11492 SVAQLLLSK True NCI_RA007_Epitope_Rep4 957.58588164061 957.58478993586 51.135 2 0.15653353990950925 0.0006540935353755587 0.002601054172263476 ['ENSG00000073614|ENST00000399788|KDM5A', 'nc|ENSG00000073614|P29375-2|KDM5A', 'ENST00000541335.1_1_12:431581-432275:-|nuORF'] 1820 7457 AEIAESVQA True H1975_Epitope_Rep3 916.45017601344 916.44962496793 33.662 1 0.15652185028746737 0.0006540935353755587 0.002601755347096816 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 3916 8492 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 40.137 2 0.15652135162966938 0.0006540935353755587 0.0026017852621206313 ['ENSG00000075618|ENST00000382361|FSCN1'] 21514 6826 ERMAGNEAL True PC9_epitope_Rep5 989.4600295044899 989.4589299358599 31.228 2 0.15651963724683396 0.0006540935353755587 0.0026018881124302883 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 11058 14661 DAVLLVFANK True NCI_RA007_Epitope_Rep2 1088.62299542532 1088.62188993586 61.695 2 0.15651644425624603 0.0006540935353755587 0.002602079679099341 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 29568 14746 FVIETARQL True PC9_epitope_Rep4 1075.6025943339098 1075.6014899358602 64.655 2 0.15651573218570447 0.0006540935353755587 0.0026021224024039015 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BP2|p.L310Pfs*23|1|0.15|ENSG00000168264|chr1:234608566-234608567|-/GGGTGTTTGTTGTTTCTGG|frameshift_variant', 'IRF2BP2|p.A444Efs*22|1|0.06|ENSG00000168264|chr1:234607570-234607571|-/CT|frameshift_variant', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2'] 126004 19771 VLDSEGYLLFY True H1975_Epitope_Rep1 1317.6492697428098 1317.64816993586 82.282 2 0.15651424635551897 0.0006540935353755587 0.002602211552532674 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 6938 15516 AQIKPFYTV True PC9_epitope_Rep2 1065.5858816406098 1065.58478993586 64.957 2 0.15651027430647638 0.0006540935353755587 0.002602449891287301 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 25806 12382 FEYILSHVA True H1975_Epitope_Rep2 1077.5494961318898 1077.54838993586 52.714 2 0.15650851143729588 0.0006540935353755587 0.0026025556774341087 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8'] 49951 15231 KILQELPSV True PC9_epitope_Rep6 1025.6120963884498 1025.61098993586 70.685 2 0.1565064702452501 0.0006540935353755587 0.002602678170522446 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 337 6080 AAIISAEGDSK True PC9_epitope_Rep3 1060.540053647 1060.53894993586 28.435 2 0.1565061010375285 0.0006540935353755587 0.0026027003275008232 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000355202.8_1_19:38187524-38187836:-|nuORF'] 132700 14374 VVHDGFEGL True PC9_epitope_Rep3 971.47124581119 971.47014993586 60.382 2 0.1565011889282576 0.0006540935353755587 0.0026029951320369273 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 75028 20085 NHSELAILL True PC9_epitope_Rep1 1008.5603951687599 1008.55928993586 82.085 2 0.15649649895970613 0.0006540935353755587 0.0026032766356942276 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF'] 46170 18645 ISLPKGVVEV True PC9_epitope_Rep1 1039.62774645259 1039.62664993586 76.507 2 0.15649584441429853 0.0006540935353755587 0.0026033159255640804 ['ENSG00000149257|ENST00000358171|SERPINH1'] 53697 7121 KSFGTLTLK True NCI_RA007_Epitope_Rep4 993.58588164061 993.58478993586 34.011 2 0.1564955472277527 0.0006540935353755587 0.0026033337647367373 ['MTUS1|p.A991Hfs*50|1|0.46|ENSG00000129422|chr8:17656001-17656001|T/-|frameshift_variant'] 45146 17884 IPNPAQTSVVV True PC9_epitope_Rep5 1123.62372370131 1123.62262993586 73.808 2 0.1564933817737342 0.0006540935353755587 0.0026034637538057716 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 9889 19534 AYLKGTVLF True PC9_epitope_Rep1 1010.5800679841799 1010.57896993586 79.96 2 0.15649240275845533 0.0006540935353755587 0.002603522524801026 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 37890 18770 GYSEHFVEF True PC9_epitope_Rep3 1113.47672511445 1113.47562993586 77.419 2 0.15649234278097107 0.0006540935353755587 0.002603526125335815 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 141060 10076 YSNKEIFL True H1975_Epitope_Rep1 1012.5229470308799 1012.52184993586 43.693 2 0.15648874343810162 0.0006540935353755587 0.0026037422081691916 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 119749 14061 VAYEEFEKV True PC9_epitope_Rep4 1112.5389910178399 1112.5378899358602 61.995 2 0.15647992132194666 0.0006540935353755587 0.0026042719104853902 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 136433 19373 WVDPNSPVL True PC9_epitope_Rep4 1025.51819600361 1025.5170899358602 82.628 2 0.15647376212889652 0.0006540935353755587 0.002604641787852408 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 39143 7365 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.5406899358602 33.71 2 0.15646991312669412 0.0006540935353755587 0.002604872958184663 ['ENSG00000156482|ENST00000287038|RPL30'] 115792 6705 TSDHFETIM[Oxidation]KY True H1975_Epitope_Rep1 1386.6125673447 1386.6109349037902 30.837 3 0.15646891128979268 0.0006540935353755587 0.002604933131673808 ['ENSG00000136628|ENST00000366923|EPRS1'] 90441 7765 REIQEAIAVA True NCI_RA007_Epitope_Rep3 1098.6033226098998 1098.6022299358601 37.666 2 0.1564681227791271 0.0006540935353755587 0.002604980493090666 ['ENSG00000198218|ENST00000395443|QRICH1'] 99853 16052 SILHDVVEV True PC9_epitope_Rep6 1009.54441075145 1009.54330993586 74.067 2 0.15646559250626557 0.0006540935353755587 0.00260513247820376 ['ENST00000572148.1_1_17:4863453-4863890:-|nuORF', 'ENSG00000091640|ENST00000206020|SPAG7'] 99196 17821 SHLDYDITL True PC9_epitope_Rep4 1075.5185899264302 1075.51748993586 76.58 2 0.15646335443158874 0.0006540935353755587 0.0026052669193131475 ['ENSG00000163960|ENST00000296328|UBXN7'] 141329 8722 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.4284099358601 38.51 2 0.15645848626874778 0.0006540935353755587 0.0026055593736804532 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 34872 10136 GQLDTPGVHNV True PC9_epitope_Rep5 1135.56218607391 1135.56108993586 43.973 2 0.15645833276362311 0.0006540935353755587 0.0026055685960172568 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 49306 4598 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 22.791 2 0.15645344754656873 0.0006540935353755587 0.0026058621088785767 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 9071 16258 AVIDVGINRV True PC9_epitope_Rep5 1054.61349337078 1054.6123899358602 67.528 2 0.15644368586651058 0.0006540935353755587 0.002606448707463859 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 17457 17517 EHFAALQSL True PC9_epitope_Rep1 1014.51344497634 1014.51234993586 72.173 2 0.15644149993972534 0.0006540935353755587 0.002606580082163954 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 7037 5829 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep4 935.4348606187698 935.43431496793 29.045 1 0.15644028414295702 0.0006540935353755587 0.0026066531546871828 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 104999 13675 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.59957490379 60.491 3 0.15643991972504626 0.0006540935353755587 0.002606675057542143 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 107183 16488 SVINEINKI True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 68.557 2 0.15643976614430266 0.0006540935353755587 0.0026066842883639423 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 99413 4841 SHVSGTTTL True PC9_epitope_Rep5 901.45051036661 901.44940993586 23.664 2 0.1564360274813966 0.0006540935353755587 0.002606909007136537 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 111661 7937 TIEIITDR True NCI_RA007_Epitope_Rep3 959.52876068731 959.52766993586 38.329 2 0.15643586741822857 0.0006540935353755587 0.002606918628440367 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 71035 13529 LYIVHPTMF True NCI_RA007_Epitope_Rep3 1119.57868808519 1119.57758993586 60.506 2 0.15643109246871037 0.0006540935353755587 0.0026072056641691273 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 94986 5986 RTQGLMIMK True NCI_RA007_Epitope_Rep5 1076.5834561957997 1076.58234993586 29.708 2 0.1564301617306821 0.0006540935353755587 0.002607261617138088 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 95761 14776 RYIANTVEL True PC9_epitope_Rep3 1077.58185888933 1077.5807699358602 61.972 2 0.15641601347532233 0.0006540935353755587 0.0026081123121693838 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 26246 17915 FHEGDVITL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 73.703 2 0.15641147465843608 0.0006540935353755587 0.002608385277202987 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 85770 8792 QHDPETSVL True PC9_epitope_Rep5 1024.48253877088 1024.4814499358602 38.761 2 0.1564086659956738 0.0006540935353755587 0.002608554204820411 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 84931 15440 QEEDFVLQV True H1975_Epitope_Rep2 1105.5291546101298 1105.52804993586 64.547 2 0.15640816641049743 0.0006540935353755587 0.0026085842536202105 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 9065 15755 AVIDVGINRV True PC9_epitope_Rep2 1054.61349337078 1054.6123899358602 65.87 2 0.15640736439586814 0.0006540935353755587 0.0026086324935180056 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 90838 11488 RETNLDSLPL True NCI_RA007_Epitope_Rep4 1156.6088019131598 1156.6077099358602 51.121 2 0.156405552705071 0.0006540935353755587 0.002608741467099315 ['ENSG00000026025|ENST00000544301|VIM'] 96315 14207 RYSGNQVLF True PC9_epitope_Rep5 1082.55089311422 1082.5497899358602 59.654 2 0.15640423911712745 0.0006540935353755587 0.002608820482529991 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 132879 19437 VVLPLELKL True PC9_epitope_Rep6 1022.6739683690199 1022.6728699358599 87.425 2 0.15640335307221456 0.0006540935353755587 0.002608873781581743 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 43131 5176 IFAQDGEGQR True NCI_RA007_Epitope_Rep2 1119.5308859456297 1119.5297899358602 24.753 2 0.15639589793917083 0.0006540935353755587 0.00260932227989393 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 101154 6357 SLGSALRPSTS True NCI_RA007_Epitope_Rep5 1074.56693710118 1074.5658499358601 31.128 2 0.15639142835237885 0.0006540935353755587 0.0026095912056256793 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 108077 16002 SYANVQDGF True PC9_epitope_Rep1 999.4297749220299 999.42927496793 66.363 1 0.15638749207612043 0.0006540935353755587 0.0026098280660734564 ['ENSG00000152766|ENST00000371930|ANKRD22'] 8607 7521 ATYILEAGK True NCI_RA007_Epitope_Rep4 964.5229470308799 964.52184993586 35.574 2 0.15637983693911245 0.0006540935353755587 0.0026102887656869276 ['ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3', 'ENST00000472673.5_1_10:22606461-22607284:+|nuORF', 'ENST00000483684.1_1_10:22606823-22607748:+|nuORF', 'ENST00000496071.5_1_10:22605382-22607284:+|nuORF', 'ENST00000479958.6_1_10:22605346-22607121:+|nuORF', 'ENST00000602574.5_1_10:22605346-22607236:+|nuORF', 'ENST00000470045.1_1_10:22605346-22607030:+|nuORF'] 64968 13787 LQFDKAINA True PC9_epitope_Rep3 1018.5447451046199 1018.54364993586 58.11 2 0.1563796547208684 0.0006540935353755587 0.002610299732890066 ['ENSG00000140307|ENST00000396060|GTF2A2'] 103071 5997 SPGLQKEAV True PC9_epitope_Rep3 927.5025459394699 927.50144993586 28.121 2 0.156377171741359 0.0006540935353755587 0.0026104491810182728 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 12277 10402 DILIQYDR True H1975_Epitope_Rep3 1034.53965972418 1034.53856993586 45.068 2 0.156371581453056 0.0006540935353755587 0.0026107856862960413 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000339471.8_1_19:39923915-39924228:-|nuORF', 'ENST00000602153.5_1_19:39923915-39924074:-|nuORF', 'ENST00000599705.1_1_19:39923915-39924331:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 17185 15098 EGSPIKVTL True PC9_epitope_Rep1 942.53859709502 942.53750993586 62.893 2 0.15637122307472842 0.0006540935353755587 0.002610807260219248 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF'] 104718 12285 SQVDVAVKI True PC9_epitope_Rep4 957.5494961318899 957.54838993586 55.07 2 0.15636929083629264 0.0006540935353755587 0.002610923581600204 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 135134 9400 WEIDNNPKV True H1975_Epitope_Rep2 1113.54547338061 1113.54436993586 41.122 2 0.15636676951648384 0.0006540935353755587 0.0026110753736466046 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000463712.6_1_9:15489396-15510916:-|nuORF'] 65331 9552 LRDENVNVV True PC9_epitope_Rep3 1056.5563724174801 1056.55526993586 41.693 2 0.15635975738576552 0.0006540935353755587 0.0026114975741119203 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 31520 19081 GEDFLSWNDL True H1975_Epitope_Rep3 1194.51931820242 1194.51822993586 80.013 2 0.1563528983710162 0.0006540935353755587 0.002611910621359882 ['ENSG00000183856|ENST00000361170|IQGAP3'] 30155 14144 FYPPKVELF True NCI_RA007_Epitope_Rep3 1138.60628273202 1138.6051899358602 62.921 2 0.15635250314140756 0.0006540935353755587 0.002611934423921926 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 103228 18077 SPLDMKDGFLA True PC9_epitope_Rep6 1192.579810284 1192.5787099358602 82.165 2 0.15635145400135808 0.0006540935353755587 0.002611997609056488 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 85127 4739 QELPSHGV True H1975_Epitope_Rep2 865.4293809992099 865.42828993586 23.32 2 0.15634947815747322 0.0006540935353755587 0.0026121166096663203 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF', 'ANAPC5|p.L751F|1|0.16|ENSG00000089053|chr12:121308495-121308495|C/G|missense_variant'] 25490 13914 FEFGVDPSA True H1975_Epitope_Rep2 967.4287122928698 967.42816496793 58.668 1 0.15634156871553334 0.0006540935353755587 0.0026125930316396595 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 90417 11643 REIFFPETA True H1975_Epitope_Rep2 1108.5553097883198 1108.5542099358602 49.854 2 0.15634036764608636 0.0006540935353755587 0.0026126653851440296 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 92114 11089 RLASYLDKV True PC9_epitope_Rep4 1063.60259433391 1063.6014899358602 50.429 2 0.1563327259490014 0.0006540935353755587 0.0026131257746787404 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 47611 17973 IVWQEDPRL True PC9_epitope_Rep3 1154.6084079903396 1154.60730993586 74.337 2 0.1563269182543239 0.0006540935353755587 0.0026134757251522786 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 75669 7745 NLGGLAVAR True NCI_RA007_Epitope_Rep1 869.5083000262499 869.50720993586 34.119 2 0.1563234256655111 0.0006540935353755587 0.0026136861983142474 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 71320 22923 LYQFNPAFF True PC9_epitope_Rep3 1145.5545815123298 1145.5534899358602 93.441 2 0.1563221809461666 0.0006540935353755587 0.002613761212667709 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 115256 12569 TREEGTPLTL True PC9_epitope_Rep5 1115.5822528121498 1115.5811499358601 53.346 2 0.15632201121950276 0.0006540935353755587 0.002613771441594534 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 135062 4915 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 23.988 2 0.15631928001983628 0.0006540935353755587 0.002613936048457754 ['AluSp_dup3052|chr1:154173383-154173680:+|1.0420510645797556|0.0443564282974505|4.55|541.0|1|1|sense', 'AluSp_dup17171|chr6:42956085-42956345:+|3.3650599704972413|0.2092895351215914|4.01|540.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.082797392780538|0.0949023208327711|3.51|536.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 137522 6560 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 30.192 1 0.15631524577306605 0.0006540935353755587 0.0026141792076791156 ['ENSG00000127184|ENST00000247655|COX7C'] 76774 12179 NRAAAQYYL True PC9_epitope_Rep3 1068.53524305008 1068.5341499358601 51.882 2 0.15631170928601304 0.0006540935353755587 0.002614392383613305 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 49308 4790 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 23.514 2 0.1563063967261111 0.0006540935353755587 0.0026147126520547894 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 106144 10909 STDLQDYTY True H1975_Epitope_Rep3 1104.46113461996 1104.46057496793 47.048 1 0.156304929267718 0.0006540935353755587 0.002614801124895322 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 104224 15110 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 63.377 2 0.1562949182562865 0.0006540935353755587 0.002615404766925851 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 98145 21341 SESPIVVVL True PC9_epitope_Rep2 941.5433481222899 941.54279496793 87.554 1 0.15629375397588532 0.0006540935353755587 0.0026154749795045894 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 28277 17524 FRNIPGITL True PC9_epitope_Rep6 1029.5971150306498 1029.5960099358601 80.039 2 0.15629221450829542 0.0006540935353755587 0.0026155678208431466 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 4204 6239 AIAQAESLRYK True NCI_RA007_Epitope_Rep1 1248.6826355597598 1248.68098490379 28.302 3 0.15629154477812696 0.0006540935353755587 0.002615608211576747 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 29501 24225 FVFPGELLL True PC9_epitope_Rep1 1033.5848190114498 1033.5837299358602 97.998 2 0.15629086933901123 0.0006540935353755587 0.0026156489472413205 ['ENSG00000105281|ENST00000542575|SLC1A5'] 45863 11988 ISDRLIGIY True H1975_Epitope_Rep1 1048.59169529704 1048.5905899358602 51.119 2 0.1562725331649005 0.0006540935353755587 0.002616755041897057 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 77512 10784 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4608749679298 46.443 1 0.1562678568195348 0.0006540935353755587 0.0026170372081679304 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 76990 19682 NRGDFFMTL True PC9_epitope_Rep4 1099.51206507735 1099.5109699358602 83.827 2 0.15626560354417005 0.0006540935353755587 0.002617173179516277 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 139248 10888 YLHSQVVSV True PC9_epitope_Rep2 1030.5447451046198 1030.54364993586 47.198 2 0.15625730337719995 0.0006540935353755587 0.0026176741044879165 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 73322 8558 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46397496793 37.907 1 0.1562572059532183 0.0006540935353755587 0.002617679984709276 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 124753 18425 VHAYIISSL True PC9_epitope_Rep5 1001.55458151233 1001.55348993586 75.892 2 0.1562546030743805 0.0006540935353755587 0.002617837091602968 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 98027 11205 SEQFTAMFR True H1975_Epitope_Rep3 1115.5069796969099 1115.50588993586 48.199 2 0.15624340040556906 0.0006540935353755587 0.0026185133797087387 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 42760 8678 IELVSNSA True H1975_Epitope_Rep2 831.4337976733101 831.43324496793 38.341 1 0.15624038619153657 0.0006540935353755587 0.0026186953729899288 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 105663 9652 SSEEQSLYY True H1975_Epitope_Rep1 1104.46113461996 1104.4600299358601 42.055 2 0.15623935534349756 0.0006540935353755587 0.0026187576167933783 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 125061 11554 VIDSAELQAY True H1975_Epitope_Rep1 1107.54480467427 1107.54370993586 49.428 2 0.15623529007637374 0.0006540935353755587 0.002619003096738589 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 1657 8260 AEFVEVTK True PC9_epitope_Rep2 921.4807478657299 921.47964993586 37.131 2 0.15623519573182076 0.0006540935353755587 0.0026190087939789025 ['CON__P02769'] 16260 10041 EEEYPGITA True H1975_Epitope_Rep2 1007.4447562798298 1007.44417496793 43.614 1 0.1562318582915181 0.0006540935353755587 0.0026192103419155855 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 137561 7334 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep1 1078.5004977145798 1078.49940993586 33.22 2 0.15623083115317996 0.0006540935353755587 0.0026192723738881845 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 138335 7177 YHEGSAPAL True PC9_epitope_Rep2 943.4399456829099 943.43884993586 32.998 2 0.15622759548839393 0.0006540935353755587 0.002619467794994806 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 141292 6297 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep2 1167.39140075807 1167.3903099358602 29.159 2 0.1562233358547806 0.0006540935353755587 0.0026197250818695947 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 36412 20823 GVFPDNFVKL True PC9_epitope_Rep2 1134.60734536118 1134.6062499358602 85.539 2 0.15621610219569276 0.0006540935353755587 0.0026201620611396256 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 75008 7255 NHSADFETV True PC9_epitope_Rep4 1018.43558857846 1018.43448993586 35.216 2 0.156211902851056 0.0006540935353755587 0.002620415773383067 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 9280 7766 AVQEFGLAR True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 37.669 2 0.15621005872504884 0.0006540935353755587 0.002620527197881556 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 54726 13963 KYMDVQFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 62.237 2 0.1562098905808072 0.0006540935353755587 0.0026205373576110706 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 26043 19698 FGIDLDTRV True PC9_epitope_Rep1 1034.53965972418 1034.53856993586 80.594 2 0.15620811056890999 0.0006540935353755587 0.002620644913150667 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 91724 4740 RKDPNKLVL True NCI_RA007_Epitope_Rep4 1081.6607779163699 1081.6596899358601 24.666 2 0.15620639121982902 0.0006540935353755587 0.002620748807378357 ['ENSG00000135821|ENST00000331872|GLUL', 'ENST00000491322.1_1_1:182356257-182357923:-|nuORF', 'ENST00000489818.5_1_1:182354893-182357872:-|nuORF', 'ENST00000475808.5_1_1:182355349-182357923:-|nuORF'] 96176 8109 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.55560993586 37.978 2 0.1562027989904389 0.0006540935353755587 0.0026209658864482952 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 57587 4763 LEDVSKPPA True H1975_Epitope_Rep2 954.5022115863 954.50110993586 23.409 2 0.15619611587809892 0.0006540935353755587 0.0026213697958655784 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 21475 19591 ERLGQFMTL True PC9_epitope_Rep2 1093.55901526977 1093.5579099358602 80.739 2 0.15619528267783148 0.0006540935353755587 0.0026214201566125144 ['ENSG00000113739|ENST00000265087|STC2'] 118892 9354 VADGYPVRL True H1975_Epitope_Rep1 988.5341804209199 988.53308993586 40.888 2 0.15619507286089881 0.0006540935353755587 0.002621432838634623 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 32641 9495 GGNFGFGDSR True PC9_epitope_Rep2 1012.4362572847999 1012.43516993586 41.866 2 0.15619274253970333 0.0006540935353755587 0.0026215736949896317 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 105310 11086 SRPENAIIY True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 47.53 2 0.15618869801562743 0.0006540935353755587 0.002621818184329951 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 40040 10896 HPTEDLVVSA True PC9_epitope_Rep3 1066.5294889632999 1066.52838993586 46.894 2 0.15618843844814564 0.0006540935353755587 0.0026218338758236576 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 96754 15627 SAM[Oxidation]EVVPAL True PC9_epitope_Rep6 931.4684693103098 931.46736993586 72.312 2 0.1561768184836818 0.0006540935353755587 0.0026225364272887837 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 18144 17562 EIITIIHQV True PC9_epitope_Rep4 1064.6229954253201 1064.62188993586 75.57 2 0.1561756541101895 0.0006540935353755587 0.0026226068365052912 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 107039 4742 SVFSDKLHSK True NCI_RA007_Epitope_Rep4 1146.6033226099 1146.60166490379 24.673 3 0.15617501899620193 0.0006540935353755587 0.002622645242398317 ['PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'PTPN12-RSBN1L|8|fusion', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L', 'ENSG00000187257|ENST00000334955|RSBN1L'] 8292 14283 ATIIDILTK True NCI_RA007_Epitope_Rep3 986.60119735158 986.60010993586 63.507 2 0.15617443620271662 0.0006540935353755587 0.002622680484918922 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 77382 9435 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.46057496793 41.259 1 0.15617148243182716 0.0006540935353755587 0.002622859111771287 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 93352 12234 RPYEPINSI True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 52.369 2 0.1561686922265508 0.0006540935353755587 0.0026230278582763046 ['ENSG00000115207|ENST00000264720|GTF3C2'] 134049 19927 VYKAFVMETF True PC9_epitope_Rep2 1233.6103821362897 1233.60928993586 82.047 2 0.1561683911152349 0.0006540935353755587 0.0026230460695847112 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 54263 15880 KWNPTAGVAF True PC9_epitope_Rep6 1089.56072952193 1089.5596299358601 73.361 2 0.15616130810536197 0.0006540935353755587 0.00262347448866475 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 141404 16124 YTELEAIMY True H1975_Epitope_Rep1 1131.5158130451098 1131.51470993586 67.364 2 0.15615174393196674 0.0006540935353755587 0.002624053092825665 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 73056 15111 MRDPIRILV True PC9_epitope_Rep6 1111.65358436095 1111.65248993586 70.183 2 0.156150405850874 0.0006540935353755587 0.0026241340529193375 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 6631 19381 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 79.358 2 0.1561413032511156 0.0006540935353755587 0.0026246848684379365 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 33198 17744 GIYTGFIKV True PC9_epitope_Rep6 996.5644179200399 996.56332993586 80.888 2 0.15614089645923576 0.0006540935353755587 0.0026247094868759534 ['ENSG00000153179|ENST00000542104|RASSF3'] 41113 11490 HTVEDLVKV True PC9_epitope_Rep4 1038.5709598524597 1038.5698699358602 51.958 2 0.156138288420771 0.0006540935353755587 0.002624867326948129 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 110196 7038 TEQEVAQVASA True H1975_Epitope_Rep2 1131.54078192299 1131.53968993586 31.996 2 0.156131620796954 0.0006540935353755587 0.002625270898644454 ['ENSG00000196878|ENST00000356082|LAMB3'] 107495 2624 SVNGKVLSK True NCI_RA007_Epitope_Rep4 930.5498304850599 930.54872993586 14.716 2 0.1561306975356532 0.0006540935353755587 0.002625326785819718 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 27506 10774 FM[Oxidation]NTELAAFTK True H1975_Epitope_Rep3 1287.6169244491496 1287.6158299358601 46.524 2 0.1561212093857153 0.0006540935353755587 0.00262590119460324 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 89640 22462 QYSPLLAAF True PC9_epitope_Rep5 1008.5280324113198 1008.52692993586 91.403 2 0.15612108843606579 0.0006540935353755587 0.00262590851765568 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 2498 4269 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 21.534 2 0.15612070121227636 0.0006540935353755587 0.0026259319627561827 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 86672 18923 QLIDIIHTA True PC9_epitope_Rep2 1022.5760452329 1022.57494993586 78.152 2 0.15611923827433238 0.0006540935353755587 0.0026260205406223518 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 136747 14575 WYKSKFANL True PC9_epitope_Rep5 1155.6076797143498 1155.60658993586 61.063 2 0.15611887286494688 0.0006540935353755587 0.0026260426658699884 ['ENSG00000148798|ENST00000369849|INA'] 115475 15704 TRNDYVMMY True PC9_epitope_Rep5 1191.50526544475 1191.50416993586 65.41 2 0.15611580878201856 0.0006540935353755587 0.002626228200972175 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 108123 19642 SYDPDFNQL True PC9_epitope_Rep5 1097.46655435357 1097.46597496793 80.608 1 0.15611131778125423 0.0006540935353755587 0.00262650016185309 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 71685 4071 M[Oxidation]EDANVRVA True H1975_Epitope_Rep2 1019.4705945686298 1019.46948993586 20.743 2 0.15611045421017056 0.0006540935353755587 0.0026265524602224278 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 104976 13987 SRDKTIIM[Oxidation]W True PC9_epitope_Rep3 1164.59612943492 1164.59502993586 58.873 2 0.1561084627588129 0.0006540935353755587 0.0026266730676403694 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 90791 4357 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 23.104 2 0.15610452174328054 0.0006540935353755587 0.00262691176196663 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 85839 4989 QHEGGVQEL True PC9_epitope_Rep4 995.46722305991 995.46612993586 25.803 2 0.1561032429278663 0.0006540935353755587 0.002626989220252982 ['ENSG00000090273|ENST00000321265|NUDC'] 11816 10766 DHFNAM[Oxidation]TSL True PC9_epitope_Rep2 1050.44404546762 1050.44294993586 46.729 2 0.15610112828526765 0.0006540935353755587 0.0026271173098764817 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 1891 10040 AEIETELQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48637496793 43.559 1 0.15609509825518667 0.0006540935353755587 0.0026274825993300626 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 45547 6708 IQRTPKIQVY True H1975_Epitope_Rep1 1244.7241064489199 1244.72245490379 30.848 3 0.15607964797440488 0.0006540935353755587 0.002628418783571151 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 48482 10160 KAFQQEISL True NCI_RA007_Epitope_Rep4 1062.57095985246 1062.5698699358602 45.938 2 0.15606709644986985 0.0006540935353755587 0.002629179567439739 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF'] 142675 14300 YYPSTPGRYSI True PC9_epitope_Rep2 1302.6244519773 1302.62334993586 60.27 2 0.15606454460315758 0.0006540935353755587 0.002629334269051185 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 49850 7704 KIDEHHFVAV True PC9_epitope_Rep4 1193.6193070272102 1193.61766490379 37.019 3 0.15605815119969527 0.0006540935353755587 0.002629721898753134 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 65924 5315 LSDREHPLY True H1975_Epitope_Rep3 1128.55637241748 1128.55471490379 25.52 3 0.1560532882583032 0.0006540935353755587 0.0026300167752746828 ['ENSG00000153179|ENST00000542104|RASSF3'] 132234 17026 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 70.508 2 0.15605218858689282 0.0006540935353755587 0.0026300834611530438 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 35381 6539 GSDCTTIHY True H1975_Epitope_Rep3 995.4018459220301 995.40074993586 30.12 2 0.1560468118897318 0.0006540935353755587 0.0026304095371766844 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.Y236C|2|0.45|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 115200 15503 TRDQFLDTL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 71.811 2 0.1560455358039838 0.0006540935353755587 0.002630486932795729 ['ENSG00000010292|ENST00000315579|NCAPD2'] 67415 7158 LSSPATLNSR True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 32.503 2 0.15604323643789444 0.0006540935353755587 0.0026306263969190203 ['CON__P00761'] 115266 13634 TREGGSIPVTL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 57.734 2 0.1560346925520816 0.0006540935353755587 0.0026311446763526035 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 8178 9683 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51166993586 42.227 2 0.15602660946859867 0.0006540935353755587 0.0026316350968949133 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 76832 11495 NRAQIQTVI True PC9_epitope_Rep3 1041.59309227937 1041.59198993586 49.217 2 0.15602502722847336 0.0006540935353755587 0.002631731105964042 ['ENSG00000114030|ENST00000344337|KPNA1'] 71453 15273 LYTPVLIRF True NCI_RA007_Epitope_Rep3 1120.66446631448 1120.6633699358601 67.624 2 0.15602300450591272 0.0006540935353755587 0.002631853848244992 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 72864 11389 MPQSGTGVSV True PC9_epitope_Rep3 961.45388149489 961.45278993586 48.81 2 0.15601926074467792 0.0006540935353755587 0.0026320810411772757 ['ENSG00000115233|ENST00000409682|PSMD14'] 140289 10232 YRAQPSVSL True PC9_epitope_Rep2 1019.5399940773499 1019.53888993586 44.693 2 0.15601839715553792 0.0006540935353755587 0.0026321334515029982 ['ENSG00000239306|ENST00000310137|RBM14'] 103272 11267 SPLLLQAKA True PC9_epitope_Rep4 939.5753169569099 939.57420993586 51.115 2 0.15601710019609658 0.0006540935353755587 0.002632212164576955 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 100501 20216 SLAQYLINV True PC9_epitope_Rep6 1019.5651461960299 1019.56404993586 90.438 2 0.15601662508222577 0.0006540935353755587 0.002632241000047243 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 24793 7359 FATHAAALSVR True PC9_epitope_Rep2 1142.6196413803798 1142.61799490379 33.687 3 0.1560161583937932 0.0006540935353755587 0.002632269324470132 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 125007 17276 VIAEILRGV True PC9_epitope_Rep6 968.6018660579199 968.60076993586 79.054 2 0.1560130589642918 0.0006540935353755587 0.002632457443880132 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 31862 7956 GELERALSA True H1975_Epitope_Rep2 944.4927095317598 944.49160993586 35.551 2 0.15601038353863242 0.0006540935353755587 0.0026326198392256916 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'GOLGA2|p.R293Tfs*17|1|0.13|ENSG00000167110|chr9:128263064-128263067|TCTC/-|frameshift_variant', 'ENSG00000186399|ENST00000327271|GOLGA8R', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'ENSG00000261739|ENST00000562295|GOLGA8S', 'ENSG00000178115|ENST00000562783|GOLGA8Q'] 77555 12848 NTDNLLTEY True H1975_Epitope_Rep1 1081.49276910141 1081.49166993586 54.488 2 0.15600427037140294 0.0006540935353755587 0.002632990939148134 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 35967 15747 GTVEIFPIFK True NCI_RA007_Epitope_Rep5 1149.6433965167298 1149.6422899358602 67.287 2 0.15600069276585565 0.0006540935353755587 0.002633208141961182 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 104119 5024 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 24.415 2 0.156000099245097 0.0006540935353755587 0.0026332441773935502 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 118432 18281 TYPENWRAF True PC9_epitope_Rep1 1182.5458077337798 1182.54470993586 75.108 2 0.15599968769497657 0.0006540935353755587 0.002633269164822793 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 61930 13657 LLDIEQDTY True H1975_Epitope_Rep2 1108.52882025696 1108.5277299358602 57.671 2 0.15599719602731016 0.0006540935353755587 0.0026334204524674945 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 139953 10313 YQAVTATLEEK True PC9_epitope_Rep2 1251.63468230783 1251.63358993586 44.998 2 0.15599381560589387 0.0006540935353755587 0.0026336257168132937 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 74994 8896 NHQGTYVL True PC9_epitope_Rep5 930.4559301002199 930.45482993586 39.162 2 0.1559911373063121 0.0006540935353755587 0.002633788358582657 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 105102 6185 SREESAGPAL True PC9_epitope_Rep3 1015.4934378077497 1015.49234993586 28.831 2 0.15598710162130067 0.0006540935353755587 0.0026340334475339244 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 114636 8185 TQDTQPHYI True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 36.318 2 0.15598587993166743 0.0006540935353755587 0.0026341076457765925 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 54978 7122 KYQEVTNNL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 36.447 2 0.15598523075954573 0.0006540935353755587 0.0026341470735213447 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 53965 6702 KTYGEIFEK True NCI_RA007_Epitope_Rep4 1113.57062549929 1113.5695299358601 32.402 2 0.1559806191529785 0.0006540935353755587 0.0026344271783533112 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 71229 18400 LYPEVFEKF True PC9_epitope_Rep6 1170.5961119711399 1170.5950099358602 83.421 2 0.15597529567572904 0.0006540935353755587 0.002634750558517635 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 130875 4531 VTDALNATR True NCI_RA007_Epitope_Rep4 959.50360856863 959.50250993586 23.824 2 0.15597440249255412 0.0006540935353755587 0.002634804819738225 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 137414 7958 YEAQDPEIA True H1975_Epitope_Rep1 1034.4556553166997 1034.45507496793 35.558 1 0.15596918538203247 0.0006540935353755587 0.0026351217834776784 ['ENSG00000111678|ENST00000229281|C12orf57'] 8584 9847 [Acetylation]-ATVQQLEGR True NCI_RA007_Epitope_Rep2 1042.54072266964 1042.5396299358601 42.927 2 0.15595582187078125 0.0006540935353755587 0.002635933852482952 ['ENSG00000164687|ENST00000297258|FABP5'] 34014 9782 GLTSVINQK True PC9_epitope_Rep3 958.5447451046199 958.54364993586 42.581 2 0.15595045652918038 0.0006540935353755587 0.0026362599618493633 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 60887 13726 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 57.645 2 0.15594810837698284 0.0006540935353755587 0.002636402696909957 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 71425 18377 LYTEKFEEF True PC9_epitope_Rep1 1204.5652057656796 1204.5641099358602 75.477 2 0.15593438344588 0.0006540935353755587 0.0026372371364513114 ['ENSG00000084652|ENST00000373610|TXLNA'] 6181 9447 APNLQNQQV True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 41.293 2 0.1559304405185373 0.0006540935353755587 0.0026374769047271653 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 45692 13832 IRKPYIWEY True PC9_epitope_Rep6 1266.67609362734 1266.6749899358601 65.013 2 0.15593037261133577 0.0006540935353755587 0.0026374810343350093 ['ENSG00000136628|ENST00000366923|EPRS1'] 53862 19152 KTIEDTLMTV True PC9_epitope_Rep2 1149.59512599497 1149.5940299358601 79.039 2 0.15592301656119562 0.0006540935353755587 0.002637928412454814 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 116295 10480 TTDPYLTNSY True H1975_Epitope_Rep1 1173.5189838492502 1173.51788993586 45.266 2 0.15591934634400748 0.0006540935353755587 0.0026381516549642764 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 85230 6500 QEQEGGPAVP True H1975_Epitope_Rep2 1010.4668887067396 1010.46578993586 29.918 2 0.15590209181724932 0.0006540935353755587 0.0026392014214347186 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 22367 10636 ETEDVNLAY True H1975_Epitope_Rep3 1052.4662200004 1052.4651299358602 45.985 2 0.15589568969154075 0.0006540935353755587 0.0026395910331395355 ['ENSG00000153767|ENST00000283875|GTF2E1'] 48004 18930 IYLDTHFRL True PC9_epitope_Rep2 1176.6291434349198 1176.6274949037902 78.179 3 0.15588875339389519 0.0006540935353755587 0.0026400132174980674 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 106902 11306 SVDPHGFISY True H1975_Epitope_Rep2 1120.5189242796 1120.5178299358602 48.535 2 0.1558859991216669 0.0006540935353755587 0.0026401808775827307 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant'] 11789 14564 DHDSSEYLL True PC9_epitope_Rep4 1077.46146897313 1077.4603699358602 63.937 2 0.15587888224902427 0.0006540935353755587 0.0026406141502719406 ['ENSG00000075461|ENST00000262138|CACNG4'] 107230 19344 SVITQVFHV True PC9_epitope_Rep4 1028.5654805492 1028.5643899358602 82.516 2 0.1558785217862142 0.0006540935353755587 0.002640636097007463 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 41187 19258 HVIDMDTIDV True PC9_epitope_Rep5 1156.54342477528 1156.5423299358602 79.117 2 0.15587731902206955 0.0006540935353755587 0.002640709328476575 ['nc|ENSG00000144744|Q8TBC4-2|UBA3', 'ENSG00000144744|ENST00000361055|UBA3', 'ENST00000465108.5_1_3:69120684-69129504:-|nuORF'] 106119 9166 STDKAEYTFY True H1975_Epitope_Rep1 1223.53463391339 1223.53352993586 40.162 2 0.15586832918985735 0.0006540935353755587 0.0026412567473517875 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 75125 12951 NHYGGVVSL True PC9_epitope_Rep5 944.4715801643599 944.47048993586 54.826 2 0.15586564000858807 0.0006540935353755587 0.0026414205219679188 ['nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 95805 19938 RYINNPLLI True PC9_epitope_Rep5 1114.6498788795 1114.6487899358601 81.746 2 0.15586445456781267 0.0006540935353755587 0.0026414927200608205 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 118684 18879 TYTDRVFFL True PC9_epitope_Rep6 1160.5866099165999 1160.58550993586 85.266 2 0.15586015691217692 0.0006540935353755587 0.0026417544810139076 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 132534 16770 VVDPNDPQML True PC9_epitope_Rep5 1126.53286009158 1126.5317699358602 69.51 2 0.15585468732218483 0.0006540935353755587 0.0026420876593884904 ['ENSG00000151883|ENST00000281631|PARP8'] 134706 21525 VYTPTDTLVF True PC9_epitope_Rep2 1154.5859412102598 1154.5848499358601 88.263 2 0.1558537222418711 0.0006540935353755587 0.0026421464513063228 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 134632 10067 VYSPKSPSL True PC9_epitope_Rep5 976.52294703088 976.52184993586 43.704 2 0.15584882086499782 0.0006540935353755587 0.0026424450593953786 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'nc|ENSG00000102858|O60291-4|MGRN1', 'nc|ENSG00000102858|O60291|MGRN1'] 137898 12130 YEWVNPAA True H1975_Epitope_Rep2 948.4341320264798 948.4335849679301 51.743 1 0.15584590227625406 0.0006540935353755587 0.002642622885465496 ['ENSG00000092148|ENST00000399332|HECTD1'] 122470 4086 VGEFSGANK True NCI_RA007_Epitope_Rep2 907.4399456829099 907.43884993586 20.532 2 0.15584008904913338 0.0006540935353755587 0.002642977113908288 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF', 'ENST00000510190.1_1_4:77880016-77880280:-|nuORF'] 137805 11154 YEQLSSEALEA True H1975_Epitope_Rep2 1238.56666231766 1238.56607496793 47.941 1 0.15583596525355856 0.0006540935353755587 0.0026432284257178976 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 23961 21053 EYLPIGGLAEF True PC9_epitope_Rep6 1207.6124903112698 1207.6113899358602 93.802 2 0.15583246023140596 0.0006540935353755587 0.0026434420470594876 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 105128 14052 SRFGKFVQL True PC9_epitope_Rep2 1080.60801406752 1080.6069099358601 59.33 2 0.15582515310564693 0.0006540935353755587 0.0026438874514094846 ['ENSG00000145555|ENST00000513610|MYO10'] 84491 14017 QALLDLHAL True NCI_RA007_Epitope_Rep5 992.5654805492001 992.56438993586 60.608 2 0.15582326407016195 0.0006540935353755587 0.002644002609357568 ['ENSG00000087086|ENST00000331825|FTL'] 30169 11089 FYQEHPDL True PC9_epitope_Rep2 1047.4661604307498 1047.4650699358601 47.979 2 0.1558209509651426 0.0006540935353755587 0.0026441436259253886 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 113760 19145 TMIKGLYGI True PC9_epitope_Rep5 994.5521389841799 994.55104993586 78.676 2 0.15581184003949108 0.0006540935353755587 0.002644699139082315 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 73592 12375 MVVQDGIVKA True PC9_epitope_Rep1 1058.57941636118 1058.57830993586 52.459 2 0.1558085793035891 0.0006540935353755587 0.002644897981603365 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 72226 10559 MHEENVYTV True PC9_epitope_Rep1 1120.4859098991599 1120.48480993586 45.506 2 0.15580763439759096 0.0006540935353755587 0.0026449556055827043 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF'] 17507 13683 EHFPQAYSV True PC9_epitope_Rep1 1076.49270953176 1076.4916099358602 57.485 2 0.15580529130528914 0.0006540935353755587 0.002645098501710063 ['ENSG00000076201|ENST00000265562|PTPN23'] 75339 6525 NIPVSQVNPR True NCI_RA007_Epitope_Rep2 1122.61455599994 1122.6134499358602 29.991 2 0.155804624939429 0.0006540935353755587 0.0026451391421902924 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3'] 115469 15764 TRNDYVMMY True PC9_epitope_Rep1 1191.50526544475 1191.50416993586 65.459 2 0.15579072963026647 0.0006540935353755587 0.0026459867345539224 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 104825 14668 SRAFLAQAL True PC9_epitope_Rep4 975.5501648382298 975.54906993586 64.355 2 0.15579065508611084 0.0006540935353755587 0.0026459912823626466 ['ENSG00000109133|ENST00000504986|TMEM33'] 107298 20031 SVLDQKILL True PC9_epitope_Rep1 1027.62774645259 1027.62664993586 81.877 2 0.15578511610694395 0.0006540935353755587 0.0026463292276220412 ['ENSG00000142207|ENST00000382751|URB1'] 140740 14687 YSDDIPHAL True PC9_epitope_Rep3 1029.47672511445 1029.47562993586 61.631 2 0.15577453140180408 0.0006540935353755587 0.002646975143439583 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 116570 20175 TTYEGIFKTL True PC9_epitope_Rep1 1171.6124903112698 1171.6113899358602 82.432 2 0.1557737191867081 0.0006540935353755587 0.0026470247141487614 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 30465 13110 GAFVHFHGV True PC9_epitope_Rep5 969.4820852784097 969.48098993586 55.432 2 0.15577152802241087 0.0006540935353755587 0.0026471584488210946 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 98194 8556 SETEYVIRC True H1975_Epitope_Rep1 1098.5015599633 1098.50046993586 37.837 2 0.15577028419886768 0.0006540935353755587 0.0026472343668639325 ['ENSG00000181789|ENST00000314797|COPG1'] 45925 5739 ISEGDDKIEYR True NCI_RA007_Epitope_Rep2 1323.63065955655 1323.62902490379 26.94 3 0.1557615785916135 0.0006540935353755587 0.0026477657833125436 ['ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF'] 77730 5782 NTMNQFVNK True NCI_RA007_Epitope_Rep3 1094.51787873378 1094.51678993586 29.723 2 0.1557613771575749 0.0006540935353755587 0.002647778080711603 ['ENSG00000168090|ENST00000303904|COPS6'] 121573 8055 VFEDAAEIR True H1975_Epitope_Rep3 1048.5189242795998 1048.5178299358602 35.958 2 0.15575775874571038 0.0006540935353755587 0.0026479989917835038 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 104661 14964 SQTKVVELL True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 62.561 2 0.15575750126931065 0.0006540935353755587 0.0026480147119184306 ['nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 138788 22084 YIVDLLTHL True PC9_epitope_Rep2 1085.61209638845 1085.61098993586 90.418 2 0.15575673618738228 0.0006540935353755587 0.0026480614242873736 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 23767 20725 EYGPVYSTW True PC9_epitope_Rep1 1100.48147614172 1100.48097496793 84.543 1 0.15574982461543552 0.0006540935353755587 0.002648483450204154 ['ENSG00000148158|ENST00000374232|SNX30'] 56185 13548 LAWLDEHTL True NCI_RA007_Epitope_Rep3 1096.55530978832 1096.5542099358602 60.584 2 0.15574348081726744 0.0006540935353755587 0.0026488708664670134 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF'] 103926 11821 SQANIAQVL True NCI_RA007_Epitope_Rep5 942.5134449763399 942.51234993586 52.127 2 0.15573559746262397 0.0006540935353755587 0.0026493523823417674 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 98978 9182 SHDDGNIDL True PC9_epitope_Rep5 984.41485313388 984.41374993586 40.264 2 0.15573209031417232 0.0006540935353755587 0.0026495666272857207 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 105130 18579 SRFGKYFEI True PC9_epitope_Rep1 1145.58694426977 1145.58584993586 76.251 2 0.155714242227231 0.0006540935353755587 0.002650657200338029 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 120603 6094 VEHNYYVSA True H1975_Epitope_Rep3 1080.48762415132 1080.48652993586 28.453 2 0.15571375248604133 0.0006540935353755587 0.0026506871313432185 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2'] 21886 6577 ESDINSVRY True H1975_Epitope_Rep2 1081.50400249145 1081.50290993586 30.209 2 0.15571245496122715 0.0006540935353755587 0.002650766432453644 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000559541.1_1_15:52416976-52428016:-|nuORF'] 96102 9530 RYMPQNPHI True PC9_epitope_Rep3 1154.5654976325397 1154.5638449037901 41.604 3 0.1556931965142976 0.0006540935353755587 0.002651943733480095 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 134187 22850 VYLPPEAFTF True PC9_epitope_Rep5 1182.5961119711399 1182.5950099358602 92.888 2 0.15569143667041113 0.0006540935353755587 0.0026520513416813667 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 128963 19548 VQIPFFAKL True PC9_epitope_Rep6 1061.62735252977 1061.6262499358602 87.855 2 0.1556870355183902 0.0006540935353755587 0.002652320475558299 ['ENSG00000188641|ENST00000370192|DPYD'] 105610 9409 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4603699358602 41.159 2 0.15567629199793118 0.0006540935353755587 0.0026529775646376525 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 87430 14986 QPYMPTVSA True PC9_epitope_Rep4 992.4637179025999 992.4631649679301 65.583 1 0.15566972573321758 0.0006540935353755587 0.0026533792467283855 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 49444 6244 KEYDVAVQA True H1975_Epitope_Rep2 1021.5080252427298 1021.50692993586 28.973 2 0.15566770135582947 0.0006540935353755587 0.0026535030974274847 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 7457 8707 ASAPGYLAITK True NCI_RA007_Epitope_Rep4 1090.60225998074 1090.60116993586 40.283 2 0.15566248641287456 0.0006540935353755587 0.0026538221723713244 ['nc|ENSG00000109472|P16870-2|CPE', 'ENSG00000109472|ENST00000402744|CPE'] 57508 12121 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49624496793 51.707 1 0.15566228829217293 0.0006540935353755587 0.002653834295090091 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 43293 18447 IFTDLSSRF True PC9_epitope_Rep4 1084.55530978832 1084.5542099358602 79.027 2 0.15566185708499686 0.0006540935353755587 0.0026538606802235668 ['ENSG00000079246|ENST00000392132|XRCC5'] 29171 10281 FTQGHIVEV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 50.235 2 0.15566058226570792 0.0006540935353755587 0.0026539386866642227 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 77684 12603 NTIESLKDV True PC9_epitope_Rep5 1017.5342399905699 1017.53314993586 53.477 2 0.1556599793715003 0.0006540935353755587 0.002653975578674837 ['ENSG00000180104|ENST00000512944|EXOC3'] 26391 14018 FHWSGNEQM True PC9_epitope_Rep1 1134.45527847722 1134.45418993586 58.758 2 0.15565232156375508 0.0006540935353755587 0.0026544442160568497 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B'] 140500 13221 YRLLPGPSA True PC9_epitope_Rep4 972.5392658013599 972.53816993586 58.751 2 0.15565200558568207 0.0006540935353755587 0.0026544635548441707 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 141863 15411 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.5429699358601 64.549 2 0.15564936091627857 0.0006540935353755587 0.0026546254219001414 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 30251 19957 FYVPAEPKLAF True PC9_epitope_Rep4 1280.68051030144 1280.6794099358601 84.899 2 0.1556418824035238 0.0006540935353755587 0.002655083197744898 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 71105 20878 LYLKALEGF True PC9_epitope_Rep3 1052.5906326678798 1052.5895299358601 85.58 2 0.15563612892741502 0.0006540935353755587 0.002655435433979665 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 21057 7746 EQVANSAFVER True PC9_epitope_Rep6 1248.6098645423197 1248.6087699358602 39.154 2 0.15562132857027683 0.0006540935353755587 0.002656341747713525 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 97542 9126 SEEPLLHVA True H1975_Epitope_Rep3 993.51311062317 993.51200993586 40.093 2 0.1556196547879323 0.0006540935353755587 0.002656444262761624 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant'] 93318 6810 RPSPPVQSV True PC9_epitope_Rep3 965.52942939365 965.52832993586 31.213 2 0.15561736662354678 0.0006540935353755587 0.0026565844135823346 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 106922 7564 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4494699358602 34.076 2 0.15561713920580988 0.0006540935353755587 0.002656598343396417 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 49431 7811 KEYAVNEVV True H1975_Epitope_Rep2 1049.53932537101 1049.53822993586 34.992 2 0.15561421770929407 0.0006540935353755587 0.002656777297674582 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 132583 8382 VVESAYEVIK True H1975_Epitope_Rep1 1135.6124903112698 1135.6113899358602 37.169 2 0.15561207505258254 0.0006540935353755587 0.002656908552294563 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 24461 12621 FADQEVRSL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 53.57 2 0.15559740863437663 0.0006540935353755587 0.0026578071597458735 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 105040 19589 SRDPIIFSV True PC9_epitope_Rep1 1032.56039516876 1032.55928993586 80.176 2 0.15559162498059945 0.0006540935353755587 0.002658161605978854 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000565049.1_1_16:33499109-33500962:-|nuORF', 'ENST00000554269.1_1_15:20362738-20365460:+|nuORF'] 133882 12151 VYGSFASKL True PC9_epitope_Rep6 970.5123823471799 970.51128993586 58.091 2 0.15559016042912222 0.0006540935353755587 0.0026582513672339676 ['ENSG00000155096|ENST00000337198|AZIN1'] 54506 9783 KYIEGVSDF True NCI_RA007_Epitope_Rep3 1056.51277627 1056.51166993586 45.545 2 0.155587591612369 0.0006540935353755587 0.0026584088153770932 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 65574 14403 LRSDSYVEL True PC9_epitope_Rep5 1080.54513902744 1080.5440499358601 60.401 2 0.1555846548432037 0.0006540935353755587 0.002658588827488084 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 53409 15343 KQVSDLISV True PC9_epitope_Rep1 987.5600608155898 987.55896993586 63.835 2 0.15558185910851802 0.0006540935353755587 0.002658760206050741 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 23844 23396 EYINFLENL True PC9_epitope_Rep5 1153.5655401188499 1153.56444993586 94.973 2 0.15558068395594515 0.0006540935353755587 0.002658832246203966 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 97445 13378 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.40686993586 56.568 2 0.15557196642152568 0.0006540935353755587 0.0026593667163450603 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 96568 17123 SAFDHFASV True PC9_epitope_Rep1 979.43994568291 979.43884993586 70.687 2 0.15555085097222107 0.0006540935353755587 0.0026606617441503016 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 114498 6856 TQADWQHRV True PC9_epitope_Rep1 1139.5472047161102 1139.54554490379 31.176 3 0.15554955556174815 0.0006540935353755587 0.00266074121321194 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF'] 34710 8210 GQDVGRYQV True PC9_epitope_Rep5 1020.49885754136 1020.49776993586 36.519 2 0.15554907097594153 0.0006540935353755587 0.0026607709415246068 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 138460 7537 YHNPTANSF True PC9_epitope_Rep4 1049.45665837621 1049.45556993586 36.36 2 0.15554872980128104 0.0006540935353755587 0.0026607918720660075 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 29706 16950 FVLSQAKDEL True PC9_epitope_Rep1 1148.607739284 1148.60664993586 70.022 2 0.15554749971932183 0.0006540935353755587 0.002660867337068367 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 96100 9304 RYMPQNPHI True PC9_epitope_Rep1 1154.5654976325397 1154.5638449037901 40.642 3 0.15554550589280036 0.0006540935353755587 0.002660989662007854 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 140498 15003 YRLLPGPSA True PC9_epitope_Rep3 972.5392658013599 972.53816993586 62.836 2 0.15553986473464815 0.0006540935353755587 0.0026613357878660106 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 116885 20225 TVFDEAIRAV True PC9_epitope_Rep3 1119.59242357303 1119.5913299358601 83.055 2 0.15553727414923024 0.0006540935353755587 0.002661494754066891 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 115809 15223 TSDQATLLLY True H1975_Epitope_Rep2 1123.57610480255 1123.5750099358602 63.713 2 0.15553292848570335 0.0006540935353755587 0.0026617614384687347 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 40815 7562 HSDPESDFY True H1975_Epitope_Rep1 1095.41451878071 1095.4134299358602 34.081 2 0.15553269962189312 0.0006540935353755587 0.0026617754841072342 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 6927 15999 AQIKEMVEL True PC9_epitope_Rep1 1059.56343194387 1059.5623299358601 66.351 2 0.1555323130905145 0.0006540935353755587 0.002661799206155843 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 85740 8678 QHDDQQPVVL True PC9_epitope_Rep6 1177.5727507576098 1177.57164993586 43.225 2 0.1555306720271782 0.0006540935353755587 0.00266189992318439 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 77605 6459 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 29.817 2 0.1555270358415081 0.0006540935353755587 0.0026621231004574277 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 5419 12997 ALTGHLEEVVL True NCI_RA007_Epitope_Rep1 1179.6499384491499 1179.6488499358602 54.545 2 0.1555224798378644 0.0006540935353755587 0.002662402759514915 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 114926 10360 TQTAVITRI True PC9_epitope_Rep2 1001.5869442697699 1001.58584993586 45.175 2 0.15552059135704513 0.0006540935353755587 0.0026625186878471573 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 61394 8612 LITPAVVSER True H1975_Epitope_Rep1 1083.62880908175 1083.6277099358601 38.053 2 0.1555205092433939 0.0006540935353755587 0.0026625237286790546 ['ENSG00000118181|ENST00000527673|RPS25'] 85248 8884 QEQFNSIAA True H1975_Epitope_Rep2 1006.4719740871798 1006.47086993586 39.143 2 0.1555184683921305 0.0006540935353755587 0.002662649016486009 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 56630 15305 LDIDSPPITAR True PC9_epitope_Rep3 1196.6401020414398 1196.63900993586 64.022 2 0.15551715936603985 0.0006540935353755587 0.0026627293806598443 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 107854 15183 SVVGQIAKL True PC9_epitope_Rep2 913.5596668927699 913.55856993586 63.66 2 0.1555169432314432 0.0006540935353755587 0.002662742649901035 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 66119 11334 LSELEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.53887496793 48.646 1 0.1555149026086647 0.0006540935353755587 0.0026628679339551348 ['ENSG00000145623|ENST00000274276|OSMR'] 118640 18454 TYSPALNKMF True PC9_epitope_Rep5 1170.5743309807401 1170.5732299358601 76.004 2 0.15551323152736027 0.0006540935353755587 0.0026629705343859953 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 86689 19843 QLIKELPEL True PC9_epitope_Rep5 1081.63831113629 1081.63720993586 81.373 2 0.15551294277497557 0.0006540935353755587 0.0026629882634974767 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 27896 11207 FQDRPVSSL True PC9_epitope_Rep5 1047.53490869691 1047.53380993586 48.096 2 0.15550986725616553 0.0006540935353755587 0.002663177104622753 ['ENSG00000130147|ENST00000392011|SH3BP4'] 87866 16821 QRIDEFEAL True PC9_epitope_Rep2 1119.5560380643099 1119.5549499358601 69.95 2 0.15550692679148476 0.0006540935353755587 0.002663357665727189 ['ENSG00000092820|ENST00000367075|EZR'] 88277 14256 QSEIASMLY True H1975_Epitope_Rep1 1040.48484727 1040.48374993586 60.019 2 0.1554979642858363 0.0006540935353755587 0.0026639080894207304 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 104734 13210 SQVEILQRV True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 58.71 2 0.15549641831614497 0.0006540935353755587 0.002664003045140569 ['ENSG00000117318|ENST00000374561|ID3'] 126226 21739 VLGNLEITYV True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 88.452 2 0.15548585983020569 0.0006540935353755587 0.0026646516530642707 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'nc|ENSG00000146648|P00533-2|EGFR', 'nc|ENSG00000146648|P00533-4|EGFR', 'nc|ENSG00000146648|P00533-3|EGFR', 'EGFR|p.S752Pfs*3|1|0.48|ENSG00000146648|chr7:55174791-55174813|TCTCCGAAAGCCAACAAGGAAAT/-|frameshift_variant', 'EGFR|p.T751Nfs*15|1|0.5|ENSG00000146648|chr7:55174789-55174789|C/-|frameshift_variant', 'ENSG00000146648|ENST00000275493|EGFR'] 77557 12907 NTDNLLTEY True H1975_Epitope_Rep2 1081.49276910141 1081.49166993586 54.76 2 0.15548510443202707 0.0006540935353755587 0.002664698063221112 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 132466 14558 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51714993586 61.154 2 0.1554844385188386 0.0006540935353755587 0.002664738976267352 ['ENSG00000100220|ENST00000216038|RTCB'] 52525 11932 KLEATINELV True H1975_Epitope_Rep3 1128.63903941228 1128.6379499358602 51.051 2 0.15548434977113376 0.0006540935353755587 0.0026647444288856867 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 54061 17537 KVIEINPYL True PC9_epitope_Rep4 1087.62774645259 1087.62664993586 75.468 2 0.15548247705019735 0.0006540935353755587 0.0026648594905973357 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 54058 19136 KVIEINPYL True PC9_epitope_Rep1 1087.62774645259 1087.62664993586 78.399 2 0.15548184613132549 0.0006540935353755587 0.002664898255954109 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 104466 18916 SQLPPLREIIL True PC9_epitope_Rep6 1277.77072228817 1277.7696299358602 85.405 2 0.15545874467708642 0.0006540935353755587 0.0026663180590118366 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 71317 23034 LYQFNPAFF True PC9_epitope_Rep1 1145.5545815123298 1145.5540749679299 93.4 1 0.1554530462502194 0.0006540935353755587 0.00266666839728305 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 32220 10888 GEYGKFFVT True H1975_Epitope_Rep1 1046.50729696674 1046.5061899358602 46.841 2 0.15544815159179834 0.0006540935353755587 0.0026669693566693142 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 96619 14147 SAHLFEVEL True NCI_RA007_Epitope_Rep4 1043.52876068731 1043.52766993586 61.696 2 0.1554325015476314 0.0006540935353755587 0.0026679318631628087 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 53949 9755 KTTTIAVEV True PC9_epitope_Rep4 960.5491617787198 960.54806993586 45.161 2 0.1554322089073432 0.0006540935353755587 0.0026679498643781786 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 45684 14536 IRKPYIWEY True PC9_epitope_Rep4 1266.67609362734 1266.6744449037901 63.827 3 0.15543167171747221 0.0006540935353755587 0.002667982908915184 ['ENSG00000136628|ENST00000366923|EPRS1'] 140552 19838 YRPPELLL True PC9_epitope_Rep1 999.5753169569099 999.57420993586 81.123 2 0.1554292386112988 0.0006540935353755587 0.0026681325833922986 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 88712 13017 QTHSVFVNV True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 54.94 2 0.15542764699116943 0.0006540935353755587 0.002668230497711912 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 40608 13605 HRIQDLEQL True PC9_epitope_Rep1 1150.6094706195 1150.60836993586 57.188 2 0.1554257063513978 0.0006540935353755587 0.002668349888097318 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 57505 11922 LEDLPTVEA True H1975_Epitope_Rep1 985.49679185269 985.49624496793 50.859 1 0.15542565098192684 0.0006540935353755587 0.0026683532945688806 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 77540 10940 NTDLGNDLY True H1975_Epitope_Rep2 1023.4509042894299 1023.4498099358599 47.115 2 0.15542461243324082 0.0006540935353755587 0.0026684171895457686 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 106147 13082 STDLQDYTYY True H1975_Epitope_Rep2 1267.52446315251 1267.52336993586 55.443 2 0.15541464549012102 0.0006540935353755587 0.002669030466713029 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 41235 9840 HVLEEVQQV True PC9_epitope_Rep6 1079.56112344475 1079.56002993586 48.321 2 0.15540975275750515 0.0006540935353755587 0.002669331573471039 ['ENSG00000136026|ENST00000378026|CKAP4'] 111292 16486 THMELYSQL True PC9_epitope_Rep3 1120.52229540788 1120.52118993586 68.55 2 0.1554094763780724 0.0006540935353755587 0.002669348583323797 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 8550 8953 ATVAVPLVGK True NCI_RA007_Epitope_Rep5 953.5909670210499 953.58986993586 41.097 2 0.15540700227963544 0.0006540935353755587 0.002669500857249125 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 140935 11591 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.5015099358602 49.573 2 0.15540629545709456 0.0006540935353755587 0.002669544361815438 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 118454 16784 TYPIKTPTF True PC9_epitope_Rep5 1066.5698972233001 1066.5688099358601 69.566 2 0.15540030600528618 0.0006540935353755587 0.0026699130379004995 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 35870 8006 GTMTGMLYK True NCI_RA007_Epitope_Rep3 1000.47217441132 1000.47106993586 38.587 2 0.1553957880842323 0.0006540935353755587 0.002670191168646309 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 95092 20158 RVADILTQL True PC9_epitope_Rep5 1027.60259433391 1027.6014899358602 82.586 2 0.1553930423761311 0.0006540935353755587 0.0026703602131286203 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 17427 10474 EHDPVGQMV True PC9_epitope_Rep5 1010.44913046762 1010.44802993586 45.275 2 0.15539045607825414 0.0006540935353755587 0.002670519452994914 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 110953 16318 THADYVLEM True PC9_epitope_Rep1 1077.48009624273 1077.47898993586 67.585 2 0.15538816390493063 0.0006540935353755587 0.002670660591358009 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 72069 4156 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 21.084 2 0.1553836908682915 0.0006540935353755587 0.002670936035703445 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 34971 10484 GQSELASRLTL True NCI_RA007_Epitope_Rep3 1173.6353510141698 1173.63424993586 48.3 2 0.15538178390108986 0.0006540935353755587 0.002671053473119943 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 6352 4965 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 24.465 2 0.15537798741844408 0.0006540935353755587 0.002671287288548522 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 11996 7775 DHQREITSL True PC9_epitope_Rep1 1097.54653600977 1097.54542993586 34.728 2 0.15536961908035474 0.0006540935353755587 0.00267180274468147 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1'] 107719 10444 SVSDLFNTK True NCI_RA007_Epitope_Rep1 1009.50802524273 1009.50692993586 44.608 2 0.1553693465673851 0.0006540935353755587 0.0026718195320574933 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 86147 10741 QIDPSIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 46.307 2 0.15536914594691478 0.0006540935353755587 0.0026718318907705497 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.R165S|1|0.22|ENSG00000186081|chr12:52519802-52519802|C/A|missense_variant'] 42630 2729 IEHDVVMKA True H1975_Epitope_Rep2 1040.5324661687598 1040.53136993586 14.572 2 0.15536642654046742 0.0006540935353755587 0.0026719994185025876 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 95176 18474 RVIDDSLVVGV True PC9_epitope_Rep2 1170.66083748602 1170.6597499358602 76.394 2 0.155366104153879 0.0006540935353755587 0.0026720192796686327 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 131174 12417 VTEKDLLLY True H1975_Epitope_Rep2 1092.60667665484 1092.60556993586 52.848 2 0.15535649943395313 0.0006540935353755587 0.002672611062081323 ['ENSG00000168807|ENST00000336278|SNTB2'] 108259 16009 SYIEHIFEI True NCI_RA007_Epitope_Rep5 1149.57062549929 1149.5695299358601 68.305 2 0.1553528341568123 0.0006540935353755587 0.002672836927858091 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 103376 5141 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 24.081 2 0.15535229887800886 0.0006540935353755587 0.0026728699149959146 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 14160 13477 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.4579299358602 56.972 2 0.15534942162995935 0.0006540935353755587 0.0026730472354905698 ['ENSG00000149823|ENST00000279281|VPS51'] 23746 18495 EYGIFNQKI True PC9_epitope_Rep3 1110.57095985246 1110.5698699358602 76.357 2 0.15533825724245845 0.0006540935353755587 0.00267373539109453 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 87909 13595 QRISEAYESL True PC9_epitope_Rep5 1194.5880664685797 1194.58696993586 57.318 2 0.15533669696221022 0.0006540935353755587 0.0026738315784313074 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 109730 4158 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 21.093 2 0.155336220554643 0.0006540935353755587 0.0026738609484424254 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 31650 9908 GEFQSFSSA True NCI_RA007_Epitope_Rep3 958.4032258210199 958.40267496793 46.055 1 0.15533032617097692 0.0006540935353755587 0.002674224357438354 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 104263 17162 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 74.018 2 0.15532872130335418 0.0006540935353755587 0.0026743233115709367 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 5559 17999 AMSSKFFLV True PC9_epitope_Rep6 1028.5364889200398 1028.5353899358602 81.861 2 0.15532125397169474 0.0006540935353755587 0.0026747837859431712 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 107383 19470 SVLKSLVEI True PC9_epitope_Rep2 986.6011973515799 986.60010993586 80.271 2 0.15530693121777764 0.0006540935353755587 0.0026756672224967264 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 137457 13848 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.47002496793 58.412 1 0.1553051438651855 0.0006540935353755587 0.0026757774879617416 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 41867 9536 IAYYDVDYEK True H1975_Epitope_Rep1 1277.58158410581 1277.5804899358602 41.603 2 0.15530486553533684 0.0006540935353755587 0.0026757946591115566 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 43077 17958 IEVIEIMTDR True PC9_epitope_Rep6 1217.63257413285 1217.6314699358602 81.704 2 0.15530317981630723 0.0006540935353755587 0.002675898659411255 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 25787 9791 FEVTGQETVA True H1975_Epitope_Rep2 1079.51350454599 1079.51297496793 42.649 1 0.1552914826599534 0.0006540935353755587 0.002676620425585844 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 95922 7647 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.6154299358602 37.204 2 0.15528926059342263 0.0006540935353755587 0.0026767575588432656 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 87874 15239 QRIDEFEAL True PC9_epitope_Rep6 1119.5560380643099 1119.5549499358601 70.725 2 0.15528902639356953 0.0006540935353755587 0.002676772012729028 ['ENSG00000092820|ENST00000367075|EZR'] 74878 5344 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 25.943 2 0.1552848613088313 0.0006540935353755587 0.002677029078237159 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 6008 9287 APITGQVSA True PC9_epitope_Rep1 842.4497820906199 842.44923496793 40.577 1 0.15528108847670483 0.0006540935353755587 0.002677261955499339 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 141037 18900 YSLEKVFGI True PC9_epitope_Rep6 1054.5698972233 1054.5688099358601 85.345 2 0.15528069415814455 0.0006540935353755587 0.0026772862958949688 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 96028 12170 RYLPQCSYF True NCI_RA007_Epitope_Rep3 1175.5433652056302 1175.54226993586 54.994 2 0.1552801105626388 0.0006540935353755587 0.0026773223203347255 ['ENSG00000118971|ENST00000261254|CCND2', 'nc|ENSG00000118971|P30279-2|CCND2'] 62925 20015 LLPDLIQKV True PC9_epitope_Rep3 1037.6484818971699 1037.64738993586 82.235 2 0.15527669270233718 0.0006540935353755587 0.002677533309223951 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 84264 20674 PYNPILGETF True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 87.68 2 0.15527596673364416 0.0006540935353755587 0.002677578126335428 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 134229 10444 VYMELSQKL True NCI_RA007_Epitope_Rep3 1109.57908200801 1109.5779899358602 48.146 2 0.155265809755333 0.0006540935353755587 0.0026782052379428875 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 54809 8759 KYPDRVPVI True NCI_RA007_Epitope_Rep2 1085.62332977849 1085.62222993586 38.716 2 0.15526514040080577 0.0006540935353755587 0.0026782465703386465 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 141376 8771 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43348993586 38.668 2 0.1552646897980916 0.0006540935353755587 0.0026782743952487404 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 29659 22299 FVLDEADEML True PC9_epitope_Rep5 1180.53219138524 1180.53108993586 90.78 2 0.15526249171240666 0.0006540935353755587 0.00267841013211249 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 141326 8689 YTDSYTDTY True H1975_Epitope_Rep1 1127.42950013851 1127.42897496793 38.353 1 0.15525958558480923 0.0006540935353755587 0.0026785896027306764 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 86226 19503 QILDGVHYL True PC9_epitope_Rep5 1056.5603951687601 1056.55928993586 80.071 2 0.15524695098478564 0.0006540935353755587 0.00267937000366526 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 69655 8928 LVDSKGFDEY True H1975_Epitope_Rep3 1171.5397192938299 1171.5386299358602 39.339 2 0.15524687547031643 0.0006540935353755587 0.0026793746686467218 ['ENSG00000164687|ENST00000297258|FABP5'] 83287 11023 PTDAYQLNY True H1975_Epitope_Rep3 1083.48728979815 1083.48618993586 47.489 2 0.15524673007053424 0.0006540935353755587 0.002679383650885735 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 4473 21645 AIVDLIHDI True PC9_epitope_Rep1 1007.5651461960299 1007.56404993586 88.086 2 0.1552436810758849 0.0006540935353755587 0.002679572012960089 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 142100 13459 YVPETVYRV True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 57.048 2 0.15523913410238052 0.0006540935353755587 0.0026798529423367767 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 134619 11777 VYSPHVLNL True NCI_RA007_Epitope_Rep1 1040.5654805492 1040.5643899358602 49.788 2 0.15523577941130878 0.0006540935353755587 0.0026800602267855124 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 114387 15435 TPSPLPTV True PC9_epitope_Rep2 810.4487194614601 810.44762993586 64.649 2 0.15523492345709208 0.0006540935353755587 0.002680113118269105 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 72940 17293 MQAERIFSEV True PC9_epitope_Rep2 1208.5859582936 1208.58486993586 71.776 2 0.1552217765943919 0.0006540935353755587 0.0026809256255541838 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 75210 12252 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.4842749679299 52.209 1 0.15522117043690922 0.0006540935353755587 0.0026809630934478525 ['ENSG00000116285|ENST00000377482|ERRFI1'] 457 13778 AALQELLSK True PC9_epitope_Rep6 971.5651461960299 971.56404993586 64.798 2 0.15521749389379058 0.0006540935353755587 0.0026811903596514913 ['ENSG00000118181|ENST00000527673|RPS25'] 1653 6405 AEFVEVTK True NCI_RA007_Epitope_Rep5 921.4807478657299 921.47964993586 31.309 2 0.15521347925262283 0.0006540935353755587 0.002681438547395897 ['CON__P02769'] 96255 12546 RYQDIIHSI True PC9_epitope_Rep6 1143.6036569630699 1143.60254993586 59.694 2 0.1552102538761141 0.0006540935353755587 0.0026816379588813872 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 89415 17530 QYASLMHSF True PC9_epitope_Rep1 1082.48551597634 1082.4844099358602 72.223 2 0.15520795697410952 0.0006540935353755587 0.0026817799757038957 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 38321 9706 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.45990993586 42.318 2 0.15518547841668925 0.0006540935353755587 0.0026831702147370557 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 90368 8754 REGPYSISV True H1975_Epitope_Rep3 1006.5083595959 1006.50726993586 38.676 2 0.15518522049123049 0.0006540935353755587 0.0026831861709115928 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 99396 18785 SHVDLVVMV True PC9_epitope_Rep2 997.52665251233 997.52554993586 77.627 2 0.15517962292010523 0.0006540935353755587 0.0026835324796303977 ['ENSG00000031698|ENST00000234677|SARS1'] 99340 10680 SHSSLVSSI True PC9_epitope_Rep5 915.46616043075 915.46506993586 46.069 2 0.15517102073573602 0.0006540935353755587 0.002684064763683559 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 139249 11984 YLHSQVVSV True PC9_epitope_Rep3 1030.5447451046198 1030.54364993586 51.124 2 0.15516627752350143 0.0006540935353755587 0.0026843583081533253 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 96653 8726 SAINEVVTR True PC9_epitope_Rep5 987.53490869691 987.53380993586 38.506 2 0.15516375217373604 0.0006540935353755587 0.0026845146082246332 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 90525 8945 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64402993586 39.365 2 0.15515733909358087 0.0006540935353755587 0.002684911570228414 ['ENSG00000127540|ENST00000591899|UQCR11'] 77090 11363 NRLLEATSY True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 51.481 2 0.1551555643652332 0.0006540935353755587 0.0026850214341357535 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 47922 8850 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.6890249037901 40.706 3 0.1551424775201391 0.0006540935353755587 0.002685831708922188 ['ENSG00000103479|ENST00000262133|RBL2'] 76969 12639 NRESYEVSL True PC9_epitope_Rep1 1095.51965255559 1095.5185499358602 53.486 2 0.15513243235955446 0.0006540935353755587 0.0026864538225994236 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000502972.1_1_4:48859213-48862776:+|nuORF'] 39038 4362 HHSDGSVSL True PC9_epitope_Rep5 937.42535824793 937.42426993586 21.849 2 0.15512092302713293 0.0006540935353755587 0.0026871667915639025 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 2669 9131 AESPGSPLV True H1975_Epitope_Rep2 855.43379767331 855.43324496793 40.074 1 0.155118223727616 0.0006540935353755587 0.002687334032470644 ['nc|ENSG00000172059|O14901-2|KLF11', 'ENSG00000172059|ENST00000305883|KLF11'] 120347 7728 VEEENIRVV True H1975_Epitope_Rep3 1085.57168812845 1085.5705899358602 34.709 2 0.15511563681430704 0.0006540935353755587 0.0026874943199896003 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 118185 13217 TYITSVSRL True PC9_epitope_Rep4 1038.57095985246 1038.5698699358602 58.736 2 0.15511544976547428 0.0006540935353755587 0.002687505910076296 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 101849 12145 SLPKGVVEV True PC9_epitope_Rep2 926.54368247546 926.54258993586 52.025 2 0.155107694826544 0.0006540935353755587 0.00268798647240178 ['ENSG00000149257|ENST00000358171|SERPINH1'] 28801 12584 FSVEGQLEFR True NCI_RA007_Epitope_Rep2 1210.5982372294598 1210.5971499358602 53.563 2 0.15510590238075486 0.0006540935353755587 0.002688097559862364 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 44336 12101 ILDQKINEV True PC9_epitope_Rep1 1070.5971746003 1070.5960699358602 51.406 2 0.15510567383434967 0.0006540935353755587 0.00268811172443563 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 54571 7734 KYISKPENL True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 34.69 2 0.15510310388244988 0.0006540935353755587 0.0026882710069375797 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 133784 18124 VYEYVVERF True PC9_epitope_Rep2 1202.5971746002995 1202.5960699358602 75.016 2 0.15510164869710505 0.0006540935353755587 0.0026883612017343074 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 95858 18809 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.62577490379 77.574 3 0.1551005827492554 0.0006540935353755587 0.002688427272861802 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 33081 10734 GINVTDFTR True NCI_RA007_Epitope_Rep1 1021.51925863277 1021.51816993586 45.745 2 0.15509765349237023 0.0006540935353755587 0.0026886088466557775 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 27268 19740 FLQEGDLISA True PC9_epitope_Rep4 1091.54989005471 1091.54937496793 84.053 1 0.1550959927505857 0.0006540935353755587 0.0026887117953256936 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 53663 10258 KSDLFFHDY True H1975_Epitope_Rep2 1170.53457434374 1170.5329349037902 44.463 3 0.15509000760151473 0.0006540935353755587 0.0026890828447620266 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1'] 34919 8102 GQNPTEAEL True NCI_RA007_Epitope_Rep1 957.44033960573 957.43924993586 35.514 2 0.15508766974984078 0.0006540935353755587 0.0026892277937927344 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 96834 9343 SASFEPFSNK True NCI_RA007_Epitope_Rep1 1112.5138388991597 1112.51274993586 40.337 2 0.1550857668940442 0.0006540935353755587 0.0026893457784169642 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 26562 12722 FIIYDTHSL True NCI_RA007_Epitope_Rep4 1107.56006081559 1107.5589699358602 55.99 2 0.15507906109719588 0.0006540935353755587 0.0026897616056350297 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 138601 8035 YIDQEELNK True PC9_epitope_Rep1 1150.5506183307 1150.5495299358602 35.728 2 0.15507429568491707 0.0006540935353755587 0.002690057148362201 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 110615 18620 TFTFSHATF True PC9_epitope_Rep5 1057.4868958753298 1057.48578993586 76.648 2 0.1550700441023255 0.0006540935353755587 0.0026903208515864775 ['ENSG00000204713|ENST00000377199|TRIM27'] 75603 13691 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.50207496793 57.805 1 0.15506767652038336 0.0006540935353755587 0.0026904677113717044 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 101502 20555 SLLDPVPEV True PC9_epitope_Rep4 967.52261267771 967.52150993586 87.216 2 0.1550629294733049 0.0006540935353755587 0.0026907621921367225 ['ENSG00000089154|ENST00000300648|GCN1'] 28258 19682 FRMDIEQSL True PC9_epitope_Rep1 1137.54884450889 1137.54774993586 80.531 2 0.15506209524584183 0.0006540935353755587 0.0026908139463539303 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 38841 6270 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 29.152 2 0.15506166656966439 0.0006540935353755587 0.0026908405411654296 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 104100 21139 SQDYPTLAF True PC9_epitope_Rep5 1040.48147614172 1040.4803699358602 86.37 2 0.15506045469568244 0.0006540935353755587 0.0026909157265144366 ['ENSG00000134697|ENST00000373062|GNL2'] 106008 10684 SSVPGVRLLQ True NCI_RA007_Epitope_Rep1 1054.61349337078 1054.6123899358602 45.549 2 0.15505421842527783 0.0006540935353755587 0.0026913026613989074 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 49519 7760 KFIDTTSKF True NCI_RA007_Epitope_Rep4 1085.57571087973 1085.57460993586 36.528 2 0.15505065790595612 0.0006540935353755587 0.002691523601836701 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 7679 9592 ASLELLEGK True H1975_Epitope_Rep1 958.5335117145798 958.53240993586 41.821 2 0.15505035886168372 0.0006540935353755587 0.0026915421592150824 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.G397D|1|0.36|ENSG00000170950|chr6:49785998-49785998|C/T|missense_variant'] 64095 21419 LPDIFEAQIA True PC9_epitope_Rep4 1115.58627556343 1115.5851699358602 90.565 2 0.15504325415031675 0.0006540935353755587 0.002691983084029736 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 54791 19486 KYNLINEYF True PC9_epitope_Rep4 1202.5971746003 1202.5960699358602 83.069 2 0.15503999416805506 0.0006540935353755587 0.002692185425587725 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 45304 19705 IPYHIVNIV True PC9_epitope_Rep3 1066.6175161220601 1066.61640993586 81.024 2 0.15503852438329985 0.0006540935353755587 0.002692276657590094 ['ENSG00000031698|ENST00000234677|SARS1'] 76678 14233 NQSEKIFSL True PC9_epitope_Rep6 1064.55022440788 1064.54912993586 66.636 2 0.15502965314161213 0.0006540935353755587 0.002692827375896745 ['ENSG00000130818|ENST00000253115|ZNF426'] 104800 22984 SQYPEIIFL True PC9_epitope_Rep2 1108.580461907 1108.57987496793 93.903 1 0.15502686863417525 0.0006540935353755587 0.002693000258654095 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 107553 11342 SVPEFPLSPPK True NCI_RA007_Epitope_Rep3 1196.6441247927198 1196.64302993586 51.728 2 0.15502615527058874 0.0006540935353755587 0.0026930445513077368 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 73597 11062 MVVQDGIVKA True PC9_epitope_Rep4 1058.57941636118 1058.57830993586 50.326 2 0.15502048417277345 0.0006540935353755587 0.0026933966948910182 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 90995 16534 RFEEAHFTF True PC9_epitope_Rep5 1182.5458077337796 1182.54415490379 68.6 3 0.15501876902515868 0.0006540935353755587 0.0026935032050477725 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 87208 14500 QPITPGPSI True PC9_epitope_Rep2 908.4967322830399 908.49562993586 61.043 2 0.15501555571713124 0.0006540935353755587 0.0026937027618274155 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 1965 8961 AEIPEEHIP True H1975_Epitope_Rep2 1033.50802524273 1033.5069299358602 39.422 2 0.15501481276086687 0.0006540935353755587 0.002693748903903417 ['ENSG00000198218|ENST00000395443|QRICH1'] 21502 19392 ERLSYTQLL True PC9_epitope_Rep1 1121.6080736371698 1121.6069699358602 79.403 2 0.1550064272732775 0.0006540935353755587 0.002694269748041226 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 131057 14459 VTDSGPTFNYL True H1975_Epitope_Rep2 1212.56626839484 1212.56516993586 60.772 2 0.1550055791186399 0.0006540935353755587 0.002694322434693415 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 24294 15765 EYTRALFLL True NCI_RA007_Epitope_Rep4 1124.62299542532 1124.62188993586 68.464 2 0.15500365376696976 0.0006540935353755587 0.002694442039732272 ['ENSG00000129933|ENST00000262815|MAU2'] 96328 8314 RYSSMAASF True NCI_RA007_Epitope_Rep4 1018.4542158480599 1018.45310993586 38.794 2 0.15499779572100877 0.0006540935353755587 0.00269480598078548 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 74624 18307 NGISDLVKV True PC9_epitope_Rep5 943.53384606775 943.53274993586 75.432 2 0.15499353768415863 0.0006540935353755587 0.0026950705493233467 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 39125 14798 HHYEGAVVIL True PC9_epitope_Rep5 1136.5978433066398 1136.59674993586 61.92 2 0.15498932996559325 0.0006540935353755587 0.0026953320168355316 ['ENSG00000163655|ENST00000496455|GMPS'] 108415 14835 SYLNSVQRL True PC9_epitope_Rep5 1078.5771078620598 1078.5760099358602 62.065 2 0.15498625385236003 0.0006540935353755587 0.002695523182431894 ['nc|ENSG00000136243|O15504-2|NUP42', 'ENSG00000136243|ENST00000258742|NUP42'] 138870 9588 YKDPTNIQL True NCI_RA007_Epitope_Rep5 1090.56587447202 1090.56476993586 43.524 2 0.15498542011184663 0.0006540935353755587 0.002695574997711362 ['ENSG00000197694|ENST00000372739|SPTAN1'] 41469 19116 HYLDTTTLI True PC9_epitope_Rep1 1075.55497543515 1075.5538699358601 78.32 2 0.15498433432249772 0.0006540935353755587 0.0026956424788031645 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 21183 6806 ERDM[Oxidation]SNVSL True PC9_epitope_Rep3 1065.47607387189 1065.4749699358601 31.196 2 0.15497253554656154 0.0006540935353755587 0.0026963758735754463 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 132527 9954 VVDPNDPQM True PC9_epitope_Rep4 1013.44879611445 1013.44768993586 45.942 2 0.15497220016084298 0.0006540935353755587 0.0026963967235728334 ['ENSG00000151883|ENST00000281631|PARP8'] 88825 20549 QVADILFQTA True PC9_epitope_Rep4 1104.5815245361598 1104.5804299358601 87.193 2 0.15495665962464414 0.0006540935353755587 0.0026973630118425945 ['ENSG00000114491|ENST00000232607|UMPS', 'UMPS|p.I201Lfs*14|1|0.09|ENSG00000114491|chr3:124737857-124737858|-/CTCCTGG|frameshift_variant'] 427 12626 AALNGLYRV True PC9_epitope_Rep6 975.55016483823 975.54906993586 60.028 2 0.15495164310417747 0.0006540935353755587 0.002697675005620561 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 134037 16836 VYISNGQVL True PC9_epitope_Rep2 991.5338460677498 991.53274993586 70.008 2 0.15494897651058917 0.0006540935353755587 0.0026978408644269215 ['ENST00000487571.1_1_3:53922418-53925815:-|nuORF', 'ENSG00000113811|ENST00000495461|SELENOK'] 118569 13056 TYQSITERI True PC9_epitope_Rep1 1109.57168812845 1109.5705899358602 55.088 2 0.15494616195765934 0.0006540935353755587 0.0026980159371520246 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.Y362Ifs*20|1|0.29|ENSG00000131558|chr7:133374899-133374900|-/G|frameshift_variant'] 6704 8615 AQAPDLQRV True PC9_epitope_Rep1 996.5352430500799 996.53414993586 37.973 2 0.15494545152860886 0.0006540935353755587 0.002698060129531194 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 138367 13621 YHGAEIVSL True PC9_epitope_Rep4 987.50254593947 987.50144993586 60.287 2 0.1549428745091152 0.0006540935353755587 0.0026982204395955903 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 84868 5697 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 26.91 2 0.15492003503484625 0.0006540935353755587 0.002699641642519798 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 141366 7656 YTEDSPGLKV True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 34.402 2 0.15491887916479677 0.0006540935353755587 0.002699713587218637 ['ENSG00000106803|ENST00000223641|SEC61B'] 64753 13579 LQADPSVSV True PC9_epitope_Rep1 914.47091145802 914.46980993586 57.088 2 0.15490379261136553 0.0006540935353755587 0.002700652793352946 ['ENSG00000119686|ENST00000238667|FLVCR2'] 121820 16499 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 68.462 2 0.1549003416729154 0.0006540935353755587 0.0027008676756558846 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 107130 19191 SVIDHIHLI True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 78.613 2 0.1548922959537587 0.0006540935353755587 0.0027013687310082613 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 53904 5979 KTNAIISLK True NCI_RA007_Epitope_Rep4 986.61243074162 986.61132993586 29.618 2 0.15488584579383793 0.0006540935353755587 0.0027017704882306196 ['ENST00000539028.1_1_12:10010098-10010200:-|nuORF'] 137732 5882 YENEVALR True NCI_RA007_Epitope_Rep5 992.4927095317598 992.49160993586 29.312 2 0.15486466404126317 0.0006540935353755587 0.0027030902424616194 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 18121 14480 EIIQRIENV True PC9_epitope_Rep2 1112.61897267404 1112.6178699358602 60.966 2 0.1548610293089052 0.0006540935353755587 0.0027033167733907216 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 109692 5318 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44510993586 25.507 2 0.15486071330791545 0.0006540935353755587 0.0027033364687195634 ['ENSG00000179409|ENST00000319004|GEMIN4'] 45922 15620 ISEENFRVM True PC9_epitope_Rep5 1123.53319444475 1123.53208993586 65.093 2 0.15485847166332492 0.0006540935353755587 0.0027034761873500303 ['ENSG00000138160|ENST00000260731|KIF11', 'KIF11|p.Y399C|1|0.26|ENSG00000138160|chr10:92621452-92621452|A/G|missense_variant'] 111632 16073 TIDQLYLEY True H1975_Epitope_Rep2 1156.5652057656798 1156.5641099358602 67.029 2 0.15485624827195782 0.0006540935353755587 0.0027036147753956947 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 28618 9471 FSHYMEENL True NCI_RA007_Epitope_Rep4 1168.4859098991599 1168.48480993586 43.287 2 0.15485341745942902 0.0006540935353755587 0.0027037912353646255 ['ENSG00000145632|ENST00000274289|PLK2'] 41979 8577 IDEPLEGSEDR True PC9_epitope_Rep2 1258.56772494682 1258.5666299358602 38.352 2 0.1548407098176551 0.0006540935353755587 0.0027045835134299956 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 40227 12079 HQIEAVDGEEL True PC9_epitope_Rep2 1238.5778957076998 1238.57678993586 51.773 2 0.1548403663288902 0.0006540935353755587 0.002704604931994626 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 95632 6783 RYASINTHL True NCI_RA007_Epitope_Rep2 1073.56179215109 1073.5606899358602 31.001 2 0.15483720500452883 0.0006540935353755587 0.002704802067287803 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 133955 21576 VYILQPEVI True PC9_epitope_Rep2 1072.6168474157198 1072.61627496793 88.464 1 0.15483119003089316 0.0006540935353755587 0.0027051771913019973 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 4335 5501 AIITPPPAK True NCI_RA007_Epitope_Rep5 906.5538532363399 906.55274993586 27.847 2 0.15482724022190694 0.0006540935353755587 0.0027054235494794856 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 72074 5521 MEVEAPSKPA True H1975_Epitope_Rep3 1057.5113963710098 1057.51028993586 26.284 2 0.15481326727208636 0.0006540935353755587 0.0027062952523401575 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 104805 23188 SQYPEIIFL True PC9_epitope_Rep5 1108.580461907 1108.57987496793 94.174 1 0.15481200772738335 0.0006540935353755587 0.0027063738428317247 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 77096 20498 NRLQYLIDL True PC9_epitope_Rep2 1146.6397081186199 1146.6386099358601 84.276 2 0.15480836186007357 0.0006540935353755587 0.0027066013430243245 ['ENSG00000137547|ENST00000260102|MRPL15', 'MRPL15|p.N170Mfs*106|1|0.14|ENSG00000137547|chr8:54142736-54142736|A/-|frameshift_variant'] 40328 13441 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 56.747 2 0.15480594840827133 0.0006540935353755587 0.0027067519516313244 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 105741 19092 SSFPRFYFV True PC9_epitope_Rep6 1148.5654805492 1148.5643899358602 86.084 2 0.15480563523089344 0.0006540935353755587 0.002706771495708008 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 60758 14022 LHSDLEYTV True PC9_epitope_Rep1 1075.51858992643 1075.51748993586 58.775 2 0.15480295733635704 0.0006540935353755587 0.002706938617535732 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 85766 7904 QHDPETSVL True PC9_epitope_Rep2 1024.48253877088 1024.4814499358602 35.768 2 0.15480203988693536 0.0006540935353755587 0.0027069958760122612 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 138591 17405 YIDPSGFVKA True PC9_epitope_Rep1 1095.5600608155898 1095.5589699358602 71.748 2 0.15479735479496565 0.0006540935353755587 0.0027072882937743885 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48', 'nc|ENSG00000090686|Q86UV5-4|USP48', 'nc|ENSG00000090686|Q86UV5-7|USP48'] 77695 23006 NTIPLFVQL True PC9_epitope_Rep5 1043.60153170475 1043.6004299358601 93.483 2 0.15479529434855088 0.0006540935353755587 0.002707416905519215 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 7140 9037 AQYDGAYKV True PC9_epitope_Rep5 1013.4818104948899 1013.48070993586 39.706 2 0.1547910766277535 0.0006540935353755587 0.0027076801919499126 ['ENST00000480626.5_1_3:58417333-58419536:-|nuORF', 'ENST00000469827.1_1_3:58417358-58419536:-|nuORF', 'ENST00000482894.5_1_3:58417133-58419536:-|nuORF', 'nc|ENSG00000168291|P11177-3|PDHB', 'nc|ENSG00000168291|P11177-2|PDHB', 'ENSG00000168291|ENST00000302746|PDHB'] 135136 12250 WEIENNPTV True H1975_Epitope_Rep1 1100.51383889916 1100.51274993586 52.143 2 0.15479066161954488 0.0006540935353755587 0.00270770609974572 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 88676 13767 QTETGTPYMLY True H1975_Epitope_Rep2 1302.5802042068199 1302.57967496793 58.1 1 0.15478342100671252 0.0006540935353755587 0.002708158150632631 ['ENSG00000167325|ENST00000300738|RRM1'] 95274 12311 RVPKTLVLV True PC9_epitope_Rep2 1023.6804507317898 1023.6793499358599 52.667 2 0.15478055731965776 0.0006540935353755587 0.0027083369590674908 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 76831 10298 NRAQIQTVI True PC9_epitope_Rep2 1041.59309227937 1041.59198993586 44.94 2 0.1547743768275686 0.0006540935353755587 0.0027087229087195143 ['ENSG00000114030|ENST00000344337|KPNA1'] 142566 21341 YYLNEIQSF True PC9_epitope_Rep3 1175.5498900547097 1175.5487899358602 87.385 2 0.1547653601585104 0.0006540935353755587 0.002709286065867498 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 108119 19643 SYDPDFNQL True PC9_epitope_Rep3 1097.46655435357 1097.46597496793 80.794 1 0.15475874366141257 0.0006540935353755587 0.002709699388936211 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 38106 4993 HAYDREVHL True H1975_Epitope_Rep3 1138.55195574338 1138.5503249037902 24.334 3 0.15475631438604887 0.0006540935353755587 0.0027098511580593587 ['ENST00000483602.1_1_2:241534571-241535939:+|nuORF', 'ENST00000416591.5_1_2:241535566-241537362:+|nuORF', 'nc|ENSG00000142330|Q9HC96-4|CAPN10', 'nc|ENSG00000142330|Q9HC96-2|CAPN10', 'ENSG00000142330|ENST00000391984|CAPN10'] 54816 12713 KYPDRVPVI True PC9_epitope_Rep1 1085.62332977849 1085.62222993586 53.773 2 0.1547425929341103 0.0006540935353755587 0.0027107085657632445 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 111400 7962 THSLETQEL True PC9_epitope_Rep2 1056.5087535187201 1056.5076499358602 35.989 2 0.1547421404118625 0.0006540935353755587 0.002710736846974715 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 106939 13797 SVDSQILYY True H1975_Epitope_Rep2 1086.5233409537 1086.52277496793 58.217 1 0.15473589166106852 0.0006540935353755587 0.002711127404251973 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 88035 14833 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 61.874 2 0.15473489976260638 0.0006540935353755587 0.002711189404709505 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 28554 11728 FSEQVAMGY True H1975_Epitope_Rep2 1030.4429824580197 1030.44247496793 50.184 1 0.15473448203271228 0.0006540935353755587 0.0027112155161163054 ['ENSG00000179051|ENST00000375436|RCC2'] 8937 11485 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6965849037902 55.25 3 0.1547315729685901 0.0006540935353755587 0.00271139736247867 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115092 13492 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61225490379 63.6 3 0.15472123647833635 0.0006540935353755587 0.0027120435975912655 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 85836 5036 QHEGGVQEL True PC9_epitope_Rep2 995.46722305991 995.46612993586 24.741 2 0.15471525971976355 0.0006540935353755587 0.0027124173333101156 ['ENSG00000090273|ENST00000321265|NUDC'] 99035 8806 SHEEVVQTL True PC9_epitope_Rep2 1040.5138388991597 1040.51274993586 39.226 2 0.1547101797502245 0.0006540935353755587 0.002712735031836705 ['ENSG00000198218|ENST00000395443|QRICH1'] 134884 13713 VYVQHPITF True PC9_epitope_Rep6 1102.5811306133398 1102.58002993586 64.536 2 0.15470081752894763 0.0006540935353755587 0.002713320637267057 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 128961 20691 VQIPFFAKL True PC9_epitope_Rep4 1061.62735252977 1061.6262499358602 87.748 2 0.15469097722441563 0.0006540935353755587 0.0027139362826098788 ['ENSG00000188641|ENST00000370192|DPYD'] 116755 17280 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54427496793 71.929 1 0.1546822590934235 0.0006540935353755587 0.0027144818370557593 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 108398 19876 SYLKEFIHI True PC9_epitope_Rep5 1148.62299542532 1148.6213549037902 81.505 3 0.15467994584584924 0.0006540935353755587 0.002714626611496544 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENSG00000131966|ENST00000254286|ACTR10'] 76716 16816 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53856993586 69.835 2 0.15467116476449 0.0006540935353755587 0.0027151762449631788 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 134846 19962 VYVEKISFL True PC9_epitope_Rep2 1096.6168474157198 1096.61574993586 82.183 2 0.1546704022754691 0.0006540935353755587 0.002715223976608602 ['ENSG00000171017|ENST00000306708|LRRC8E'] 34701 8208 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 36.551 2 0.15466973655907895 0.0006540935353755587 0.002715265650992755 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 65114 22762 LQMEQLNGILL True PC9_epitope_Rep5 1270.69550874258 1270.6944099358602 92.551 2 0.15466034554762248 0.0006540935353755587 0.0027158536038678085 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000504966.2_1_4:145493783-145493942:+|nuORF', 'ENST00000510488.1_1_3:141189685-141190057:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 108503 20638 SYMGHFDLL True PC9_epitope_Rep5 1081.49026700361 1081.4891699358602 84.437 2 0.15465880636174692 0.0006540935353755587 0.0027159499813958713 ['ENSG00000169976|ENST00000367569|SF3B5'] 70557 20971 LWAPRPFNL True PC9_epitope_Rep1 1112.61309944796 1112.6120099358602 85.49 2 0.1546584655016926 0.0006540935353755587 0.00271597132512046 ['ENSG00000174231|ENST00000304992|PRPF8'] 124932 16225 VHSEQVFAL True PC9_epitope_Rep1 1028.5290950404797 1028.5279899358602 67.228 2 0.1546563888519357 0.0006540935353755587 0.0027161013628636986 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 54983 14851 KYQEVTNNLEF True PC9_epitope_Rep4 1383.6670450652698 1383.66594993586 65.063 2 0.1546559658392733 0.0006540935353755587 0.002716127852257203 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 136342 16142 WTDINVVVY True H1975_Epitope_Rep2 1107.5600608155898 1107.5589699358602 67.302 2 0.15465356692237278 0.0006540935353755587 0.0027162780792380323 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENST00000569225.5_1_16:53269177-53281416:+|nuORF'] 33986 14930 GLSTEGIYRV True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 62.433 2 0.15464124349000694 0.0006540935353755587 0.0027170499381447655 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 11471 17112 DFEQPLAISR True PC9_epitope_Rep1 1174.59823722946 1174.5971499358602 70.647 2 0.154639857599251 0.0006540935353755587 0.002717136754924128 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'PDLIM1-SORBS1|11|fusion', 'PDLIM1-SORBS1|9|fusion', 'PDLIM1-SORBS1|7|fusion', 'PDLIM1-SORBS1|10|fusion', 'PDLIM1-SORBS1|8|fusion', 'PDLIM1-SORBS1|6|fusion', 'ENSG00000107438|ENST00000329399|PDLIM1', 'ENST00000477757.5_1_10:97028616-97050708:-|nuORF'] 107427 14418 SVLQQNPSL True PC9_epitope_Rep2 984.52400966004 984.52290993586 60.727 2 0.1546395656755131 0.0006540935353755587 0.002717155042345006 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 36701 18399 GVISKTFQL True PC9_epitope_Rep3 991.57023157647 991.56912993586 75.98 2 0.1546388697297064 0.0006540935353755587 0.002717198640027368 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 133952 21811 VYILQPEVI True PC9_epitope_Rep1 1072.6168474157198 1072.61574993586 88.707 2 0.1546318053535603 0.0006540935353755587 0.0027176412289476445 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 115032 15371 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 63.942 2 0.15462144467001365 0.0006540935353755587 0.0027182904642419426 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 33640 8997 GLGLDESGLAK True H1975_Epitope_Rep1 1058.5607890915799 1058.5596899358602 39.513 2 0.1546214233671902 0.0006540935353755587 0.002718291799307857 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 134150 16796 VYLKPSYAF True PC9_epitope_Rep2 1086.57498260374 1086.57388993586 69.853 2 0.15462050839422797 0.0006540935353755587 0.002718349142052358 ['ENST00000597277.1_9:43426178-43426727:-|nuORF', 'ENSG00000004478|ENST00000001008|FKBP4'] 85861 10737 QHFDSVM[Oxidation]QL True PC9_epitope_Rep4 1119.5018946969099 1119.5007899358602 49.057 2 0.15462043653586408 0.0006540935353755587 0.002718353645576188 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 76469 9946 NQGESITHAL True PC9_epitope_Rep3 1068.51998690876 1068.5188899358602 43.211 2 0.15459746534010327 0.0006540935353755587 0.002719793683016246 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 56857 15579 LDPHLVLDQL True H1975_Epitope_Rep3 1161.6393737654498 1161.63826993586 65.342 2 0.15459082311508326 0.0006540935353755587 0.0027202102181078575 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 71437 18362 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.5641099358602 75.648 2 0.1545867227057763 0.0006540935353755587 0.002720467387246258 ['ENSG00000084652|ENST00000373610|TXLNA'] 86517 15359 QLANEEIAQV True PC9_epitope_Rep2 1113.56660274801 1113.56550993586 64.36 2 0.15458169709917174 0.0006540935353755587 0.0027207826159000538 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF'] 138156 19530 YGLPVVVKL True PC9_epitope_Rep4 986.6164534929 986.6159049679301 83.243 1 0.1545789069832415 0.0006540935353755587 0.002720957640245859 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 89574 6272 QYNPHVHQL True PC9_epitope_Rep1 1134.55704112382 1134.55540490379 28.939 3 0.15457471265385253 0.0006540935353755587 0.0027212207722145175 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 86986 4619 QLYWSHPRK True NCI_RA007_Epitope_Rep4 1213.6356257976897 1213.63399490379 24.182 3 0.1545746243510449 0.0006540935353755587 0.002721226312178905 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 47577 12953 IVVGRITEV True PC9_epitope_Rep4 984.5967806774798 984.59568993586 57.713 2 0.15457402999022954 0.0006540935353755587 0.0027212636016341087 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 13281 17539 DLTEYLSR True PC9_epitope_Rep2 995.49237517859 995.49126993586 72.732 2 0.15457178247597997 0.0006540935353755587 0.002721404612477279 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 8051 6700 ATDPTIHTV True PC9_epitope_Rep2 953.4818104948899 953.48070993586 31.178 2 0.15456777168005933 0.0006540935353755587 0.0027216562711271175 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 117421 5483 TVPVEAVTSK True H1975_Epitope_Rep3 1029.57062549929 1029.5695299358601 26.143 2 0.15454897877780627 0.0006540935353755587 0.0027228357468156105 ['ENST00000393747.3_1_11:70269077-70281851:+|nuORF', 'nc|ENSG00000085733|Q14247-3|CTTN', 'ENSG00000085733|ENST00000301843|CTTN', 'nc|ENSG00000085733|Q14247-2|CTTN', 'CTTN|p.P403Lfs*29|1|0.26|ENSG00000085733|chr11:70431218-70431218|C/-|frameshift_variant'] 105623 5436 SSDRTITEY True H1975_Epitope_Rep2 1070.48801807414 1070.4869299358602 25.935 2 0.15454310553501785 0.0006540935353755587 0.0027232044664160715 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 105619 6774 SSDPDPAAY True H1975_Epitope_Rep2 921.3715913395699 921.3710449679301 30.971 1 0.15453435661149323 0.0006540935353755587 0.0027237538123134814 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 78367 12212 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.6069699358602 54.793 2 0.15453276205090877 0.0006540935353755587 0.0027238539468573885 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 46707 5664 ITDVKPGNY True H1975_Epitope_Rep2 1005.51311062317 1005.51200993586 26.784 2 0.1545261307990647 0.0006540935353755587 0.00272427041279357 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'ENSG00000115318|ENST00000264094|LOXL3', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3'] 140371 10288 YRDPYTGQSV True PC9_epitope_Rep4 1184.5462016566 1184.5451099358602 47.258 2 0.15452520793325378 0.0006540935353755587 0.0027243283770447893 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 8132 13659 ATEFIMNEY True H1975_Epitope_Rep3 1116.47976188956 1116.4786699358601 57.83 2 0.15452441624391253 0.0006540935353755587 0.002724378103217024 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 2668 9020 AESPGSPLV True H1975_Epitope_Rep2 855.43379767331 855.43324496793 39.648 1 0.15451950439848985 0.0006540935353755587 0.002724686637476712 ['nc|ENSG00000172059|O14901-2|KLF11', 'ENSG00000172059|ENST00000305883|KLF11'] 111342 5329 THNPTNATL True PC9_epitope_Rep5 967.47230844035 967.47120993586 25.51 2 0.154518236681162 0.0006540935353755587 0.00272476627394264 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 41604 11333 IADLNELRY True H1975_Epitope_Rep2 1105.57677350889 1105.57566993586 48.641 2 0.15451575439372503 0.0006540935353755587 0.002724922214952237 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'ENST00000565339.5_1_16:67848301-67859829:+|nuORF', 'ENST00000487120.5_1_16:67848301-67859829:+|nuORF', 'ENST00000466164.5_1_16:67840937-67859829:+|nuORF'] 75999 21358 NLVRELLAV True PC9_epitope_Rep5 1025.6233297784897 1025.62222993586 87.212 2 0.15451191367521042 0.0006540935353755587 0.0027251635121707395 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'PSAT1|p.D68Y|1|0.4|ENSG00000135069|chr9:78304745-78304745|G/T|missense_variant'] 77660 8878 NTIDPSHPM True PC9_epitope_Rep1 1010.4491304676201 1010.44802993586 38.988 2 0.15451114181169778 0.0006540935353755587 0.0027252120078865524 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 22526 17219 ETHFGFETV True PC9_epitope_Rep5 1065.47672511445 1065.47562993586 71.253 2 0.15450541857211378 0.0006540935353755587 0.0027255716224015556 ['ENSG00000110871|ENST00000288532|COQ5', 'ENST00000547736.1_1_12:120964341-120966944:-|nuORF', 'ENST00000547448.1_1_12:120965158-120966944:-|nuORF'] 141950 19807 YVIDPIKGLKL True PC9_epitope_Rep2 1257.7696596590097 1257.7680149037901 81.577 3 0.15449746265043424 0.0006540935353755587 0.002726071604058421 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 54749 10787 KYMPNVKVAVF True NCI_RA007_Epitope_Rep4 1294.7107648838999 1294.7096699358601 48.339 2 0.15449483302107736 0.0006540935353755587 0.002726236880499955 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 65348 15905 LRDGQILEL True PC9_epitope_Rep6 1055.59750895347 1055.59640993586 73.46 2 0.15449036473177838 0.0006540935353755587 0.002726517742594596 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 22298 8605 ETDIVVDHY True H1975_Epitope_Rep3 1089.49785448185 1089.4967499358602 38.09 2 0.15448938437823728 0.0006540935353755587 0.0027265793682807304 ['nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 74816 13517 NHDVQVIL True PC9_epitope_Rep1 936.50288029264 936.50178993586 56.85 2 0.15448900492943446 0.0006540935353755587 0.002726603221061728 ['ENSG00000179151|ENST00000315127|EDC3'] 54397 18221 KYFEVPSVL True PC9_epitope_Rep6 1080.5855472874398 1080.5844499358602 82.73 2 0.1544771758645917 0.0006540935353755587 0.002727346920051516 ['ENSG00000131966|ENST00000254286|ACTR10'] 8067 11500 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.48637496793 49.359 1 0.154473766616625 0.0006540935353755587 0.0027275612986544235 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 35869 8858 GTMTGMLYK True NCI_RA007_Epitope_Rep2 1000.47217441132 1000.47106993586 39.103 2 0.15446878682564044 0.0006540935353755587 0.0027278744655434826 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 45344 20743 IQDEEFYTL True PC9_epitope_Rep2 1156.5288202569598 1156.5277299358602 85.228 2 0.15446765482126598 0.0006540935353755587 0.002727945659534233 ['ENSG00000178502|ENST00000319121|KLHL11'] 54537 5149 KYIHSANVL True NCI_RA007_Epitope_Rep5 1043.57637958607 1043.5752899358602 26.5 2 0.1544659372324964 0.0006540935353755587 0.002728053685622309 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 28487 16119 FSDVMEDLY True H1975_Epitope_Rep2 1117.4637774722498 1117.46268993586 67.215 2 0.15446332549718378 0.0006540935353755587 0.0027282179563685957 ['ENSG00000167325|ENST00000300738|RRM1'] 45303 19349 IPYHIVNIV True PC9_epitope_Rep2 1066.6175161220601 1066.61640993586 79.802 2 0.15445626954387495 0.0006540935353755587 0.002728661805145706 ['ENSG00000031698|ENST00000234677|SARS1'] 106917 7632 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4494699358602 34.31 2 0.15445321291013642 0.0006540935353755587 0.0027288541024570643 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 141976 11682 YVINVTTHL True H1975_Epitope_Rep2 1058.5760452329 1058.57494993586 50.007 2 0.15445040438855806 0.0006540935353755587 0.0027290308025803957 ['DUSP10|p.P359S|1|0.32|ENSG00000143507|chr1:221706203-221706203|G/A|missense_variant', 'nc|ENSG00000143507|Q9Y6W6-2|DUSP10', 'ENST00000468085.5_1_1:221875756-221910233:-|nuORF', 'ENSG00000143507|ENST00000366899|DUSP10'] 21197 9574 ERDMSNVSL True PC9_epitope_Rep4 1049.48115887189 1049.48006993586 44.445 2 0.15444824366504623 0.0006540935353755587 0.0027291667537947214 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 111459 12128 THTTPVLL True PC9_epitope_Rep1 880.5018176634799 880.50072993586 51.513 2 0.15444762621731994 0.0006540935353755587 0.002729205604415019 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 27598 15154 FNPFVTSDR True PC9_epitope_Rep1 1081.51925863277 1081.5181699358602 63.111 2 0.1544438475866324 0.0006540935353755587 0.002729443372824971 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 54309 17790 KYAPSGFYI True PC9_epitope_Rep5 1044.5280324113198 1044.5269299358602 73.447 2 0.15443760734856674 0.0006540935353755587 0.002729836081845707 ['ENSG00000071127|ENST00000499869|WDR1'] 54832 16134 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 71.163 2 0.15443646303426298 0.0006540935353755587 0.0027299081016451507 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 75826 17265 NLPDEIYHV True PC9_epitope_Rep2 1098.5345743437401 1098.53346993586 71.669 2 0.15443596453718234 0.0006540935353755587 0.0027299394761875987 ['ENSG00000148335|ENST00000372483|NTMT1'] 52672 19723 KLVGEFLEV True PC9_epitope_Rep2 1032.5855472874398 1032.5844499358602 81.254 2 0.15443326686472703 0.0006540935353755587 0.0027301092692549453 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 107848 5761 SVVGNFQEK True NCI_RA007_Epitope_Rep3 1006.5083595959 1006.50726993586 29.641 2 0.154432215833724 0.0006540935353755587 0.002730175424605662 ['ENSG00000180061|ENST00000326652|TMEM150B'] 140526 19990 YRNEFTAWY True PC9_epitope_Rep5 1248.55637241748 1248.55526993586 81.945 2 0.1544275518963575 0.0006540935353755587 0.0027304690074589372 ['nc|ENSG00000232388|A0A096LP01-2|SMIM26', 'ENSG00000232388|ENST00000411646|SMIM26'] 93378 11372 RQADFVQVL True NCI_RA007_Epitope_Rep4 1074.5821932425 1074.58108993586 50.655 2 0.15442331594245645 0.0006540935353755587 0.00273073567713239 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 84404 11936 QADFSVLHY True H1975_Epitope_Rep2 1078.5083595959 1078.5072699358602 50.99 2 0.15441978657562208 0.0006540935353755587 0.00273095788425063 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 105087 9665 SRDTTMYAV True PC9_epitope_Rep5 1042.47534521546 1042.4742499358601 42.143 2 0.15440835333282027 0.0006540935353755587 0.0027316778391385564 ['ENSG00000165688|ENST00000371717|PMPCA'] 31955 11752 GENVFLQAT True NCI_RA007_Epitope_Rep3 977.4818104948899 977.48070993586 53.337 2 0.15440650208676246 0.0006540935353755587 0.0027317944304847412 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 28515 9527 FSEEGAVGY True H1975_Epitope_Rep1 957.4079768482898 957.4074249679301 41.569 1 0.15439919137082977 0.0006540935353755587 0.002732254907348134 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 77678 23267 NTIEHLLPLFL True PC9_epitope_Rep1 1308.7441731871597 1308.7430699358601 94.282 2 0.1543960682653801 0.0006540935353755587 0.002732451644615859 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF'] 68091 4757 LTDNGRHITY True H1975_Epitope_Rep2 1188.58873517492 1188.5876299358601 23.387 2 0.1543951334415775 0.0006540935353755587 0.0027325105357618416 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.A516Qfs*19|1|0.53|ENSG00000103197|chr16:2064373-2064373|G/-|frameshift_variant'] 103839 7545 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 34.387 2 0.15439506879363013 0.0006540935353755587 0.002732514608438881 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 73434 12962 M[Oxidation]VADKFTEL True PC9_epitope_Rep4 1068.51614777872 1068.5150499358601 57.752 2 0.1543887180369457 0.0006540935353755587 0.0027329147215023083 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 17189 15008 EGSPIKVTL True PC9_epitope_Rep5 942.53859709502 942.53750993586 62.731 2 0.15438827610865583 0.0006540935353755587 0.0027329425662295224 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF'] 18143 18946 EIITIIHQV True PC9_epitope_Rep3 1064.6229954253201 1064.62188993586 78.101 2 0.15438794719634855 0.0006540935353755587 0.0027329632903036016 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 106114 11937 STDHIPILY True H1975_Epitope_Rep3 1057.54441075145 1057.5433099358602 51.071 2 0.15438214776720513 0.0006540935353755587 0.002733328725900688 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 130138 8572 VSDSGISTDY True H1975_Epitope_Rep3 1042.44548455582 1042.44497496793 37.963 1 0.15437364787031221 0.0006540935353755587 0.0027338644123235034 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 115196 16429 TRDQFLDTL True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 71.155 2 0.15437268163472478 0.0006540935353755587 0.002733925313721491 ['ENSG00000010292|ENST00000315579|NCAPD2'] 128811 12439 VQANSGAIVKL True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 52.848 2 0.15436932145436963 0.0006540935353755587 0.002734137114922151 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant', 'SPTAN1|p.Q787Rfs*30|1|0.15|ENSG00000197694|chr9:128584448-128584448|A/-|frameshift_variant'] 32234 6919 GEYISKDGVP True H1975_Epitope_Rep1 1063.51858992643 1063.51748993586 31.657 2 0.154360406424635 0.0006540935353755587 0.002734699132501318 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 106106 11781 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 50.307 2 0.154358359089836 0.0006540935353755587 0.002734828215989318 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 47565 17643 IVVDNVPQV True PC9_epitope_Rep2 981.5494961318899 981.54838993586 73.144 2 0.1543560630173509 0.0006540935353755587 0.0027349729894976488 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 24801 8776 FATHAAALSVR True PC9_epitope_Rep5 1142.6196413803798 1142.61799490379 38.699 3 0.15435512789516426 0.0006540935353755587 0.0027350319536411888 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 142404 18089 YYEYNHDLF True PC9_epitope_Rep2 1262.5244035828598 1262.5233099358602 74.881 2 0.154355016674282 0.0006540935353755587 0.0027350389667599355 ['ENSG00000151748|ENST00000324679|SAV1'] 9896 19439 AYLKGTVLF True PC9_epitope_Rep5 1010.5800679841799 1010.57896993586 79.823 2 0.1543538473483559 0.0006540935353755587 0.002735112700595756 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 14139 9739 DSDHWAPIHY True H1975_Epitope_Rep1 1239.53088594563 1239.5297899358602 42.391 2 0.15435355647540253 0.0006540935353755587 0.002735131042392561 ['nc|ENSG00000001631|O00522-2|KRIT1', 'ENST00000486261.5_1_7:91830052-91864980:-|nuORF', 'ENST00000475770.5_1_7:91830052-91864980:-|nuORF', 'ENSG00000001631|ENST00000394505|KRIT1'] 101861 11016 SLPKGVVEV True PC9_epitope_Rep6 926.54368247546 926.54258993586 53.27 2 0.15434965334824963 0.0006540935353755587 0.0027353771767114265 ['ENSG00000149257|ENST00000358171|SERPINH1'] 4421 8703 AIQLPISSK True NCI_RA007_Epitope_Rep3 955.5702315764701 955.56912993586 41.316 2 0.15434313760534138 0.0006540935353755587 0.0027357881138762212 ['ENST00000518468.1_3_8:53599460-53658116:-|nuORF'] 93058 7133 RPNDIM[Oxidation]AEV True PC9_epitope_Rep4 1059.50189469691 1059.5007899358602 34.71 2 0.15434184678293125 0.0006540935353755587 0.0027358695312227252 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 68638 22843 LTIEDGIFEV True PC9_epitope_Rep5 1134.58085582982 1134.57974993586 92.861 2 0.15433607173707908 0.0006540935353755587 0.002736233816110179 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 4469 13384 AIVDKVPSV True PC9_epitope_Rep5 926.54368247546 926.54258993586 56.498 2 0.15433244977449856 0.0006540935353755587 0.002736462311048169 ['ENSG00000181789|ENST00000314797|COPG1'] 54465 10677 KYGNLSNYL True NCI_RA007_Epitope_Rep3 1070.53965972418 1070.53856993586 49.044 2 0.15433223497295617 0.0006540935353755587 0.002736475862604388 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 45857 8525 ISDPGVQGY True H1975_Epitope_Rep3 934.43961132974 934.43850993586 37.777 2 0.15432795505759653 0.0006540935353755587 0.0027367458909726768 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 78275 18742 NYIEKVVAI True PC9_epitope_Rep5 1047.59644632431 1047.5953499358602 77.103 2 0.15431203326898155 0.0006540935353755587 0.002737750661543865 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 47808 21013 IYGEGFQTW True PC9_epitope_Rep5 1099.4974605590298 1099.49636993586 85.883 2 0.1543060021795273 0.0006540935353755587 0.0027381313593730096 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 108426 22774 SYLPFTEAF True PC9_epitope_Rep3 1073.5069626135698 1073.5058699358601 92.87 2 0.15429897399737683 0.0006540935353755587 0.0027385750628431036 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 92376 16299 RLPETLPSL True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 75.057 2 0.1542977039292496 0.0006540935353755587 0.002738655252481427 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 109382 9984 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep1 950.47091177432 950.46980993586 43.338 2 0.1542918957542527 0.0006540935353755587 0.0027390219992212486 ['ENSG00000005022|ENST00000317881|SLC25A5'] 71709 7866 MEEKYIVSA True H1975_Epitope_Rep2 1068.5161473982798 1068.5150499358601 35.202 2 0.15429021819448008 0.0006540935353755587 0.002739127934822867 ['ENSG00000168172|ENST00000307602|HOOK3'] 104130 4940 SQEGRPVQV True PC9_epitope_Rep5 998.5145076054997 998.51340993586 24.038 2 0.15428941611631758 0.0006540935353755587 0.002739178586403617 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 17514 13559 EHFPQAYSV True PC9_epitope_Rep5 1076.49270953176 1076.4916099358602 57.177 2 0.15428857510995192 0.0006540935353755587 0.0027392316973201074 ['ENSG00000076201|ENST00000265562|PTPN23'] 108047 23057 SYADQMFLL True PC9_epitope_Rep5 1086.50558271458 1086.5044899358602 93.676 2 0.15428646814745278 0.0006540935353755587 0.0027393647599287725 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 95185 22369 RVIDYILDL True PC9_epitope_Rep5 1118.63356010902 1118.6324699358602 91.054 2 0.15428577764529908 0.0006540935353755587 0.0027394083691397136 ['ENSG00000117318|ENST00000374561|ID3'] 32222 10814 GEYGKFFVT True NCI_RA007_Epitope_Rep3 1046.50729696674 1046.5061899358602 49.584 2 0.15428540843792896 0.0006540935353755587 0.0027394316870078803 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 134808 23251 VYTVVDEMFL True PC9_epitope_Rep5 1214.5893123385397 1214.58820993586 94.421 2 0.15427825757300465 0.0006540935353755587 0.0027398833500884845 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 92327 11818 RLMNDMTAV True PC9_epitope_Rep4 1049.49978614149 1049.49868993586 53.226 2 0.15427539069721136 0.0006540935353755587 0.002740064448607475 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 1149 5791 AEAPPPPPP True H1975_Epitope_Rep3 871.44396843419 871.44286993586 27.299 2 0.1542685983253367 0.0006540935353755587 0.0027404935655784093 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 54845 16840 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 71.524 2 0.1542677301834922 0.0006540935353755587 0.002740548416403178 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 140799 8653 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.48097496793 38.243 1 0.15426047781286614 0.0006540935353755587 0.002741006677506771 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 86186 20438 QIFNGTFVKL True PC9_epitope_Rep3 1165.64954452633 1165.64844993586 83.87 2 0.15425494467235684 0.0006540935353755587 0.0027413563556791744 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 48148 18559 IYPPINVLPSL True NCI_RA007_Epitope_Rep3 1224.71181042972 1224.7107099358602 81.204 2 0.1542532467517237 0.0006540935353755587 0.002741463668177069 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 26195 20604 FHDHALMIIF True PC9_epitope_Rep2 1242.6219498795 1242.62029490379 84.687 3 0.1542491235389389 0.0006540935353755587 0.00274172428216505 ['ENSG00000198712|ENST00000361739|MT-CO2'] 116751 17167 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54370993586 71.484 2 0.15424517067729943 0.0006540935353755587 0.0027419741520395206 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 47704 17899 IYAPKLQEF True PC9_epitope_Rep5 1107.59644632431 1107.5953499358602 73.866 2 0.15423224968814483 0.0006540935353755587 0.002742791077202844 ['ENSG00000175305|ENST00000308108|CCNE2'] 11926 16814 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.54754490379 69.924 3 0.15421237156268336 0.0006540935353755587 0.0027440483388138166 ['ENSG00000273749|ENST00000617928|CYFIP1'] 4017 21120 AHFDGLIFV True PC9_epitope_Rep2 1017.5283667644899 1017.52726993586 86.697 2 0.15421203682291776 0.0006540935353755587 0.002744069515520533 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11', 'FBXO11|p.S292F|1|0.25|ENSG00000138081|chr2:47834638-47834638|G/A|missense_variant'] 55058 10407 KYTKIFNDF True NCI_RA007_Epitope_Rep2 1174.60225998074 1174.60116993586 45.073 2 0.15420868478220243 0.0006540935353755587 0.0027442815853082163 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 65837 12590 LSDLGISSY True H1975_Epitope_Rep3 953.47057710485 953.47002496793 53.63 1 0.15419805767118597 0.0006540935353755587 0.002744954026810851 ['ENSG00000165029|ENST00000374736|ABCA1'] 106157 4822 STDPAAPNLK True NCI_RA007_Epitope_Rep4 1012.5189242796 1012.51782993586 24.983 2 0.15419654050514817 0.0006540935353755587 0.002745050040469749 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 9956 23727 AYNDNWFITF True PC9_epitope_Rep5 1289.57168812845 1289.5705899358602 96.246 2 0.1541867120730934 0.0007024369157616037 0.0027456721126478123 ['ENSG00000107929|ENST00000316157|LARP4B'] 28119 17797 FRADDTFEAL True PC9_epitope_Rep4 1183.55095268387 1183.54984993586 76.487 2 0.15418520378832345 0.0007024369157616037 0.002745767589143078 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 3894 10010 AHAVGNVEL True PC9_epitope_Rep5 908.4715801643599 908.47048993586 43.481 2 0.15417973323755976 0.0007024369157616037 0.0027461139102884454 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU'] 93387 9098 RQAPIPAEL True NCI_RA007_Epitope_Rep2 993.5607295219298 993.55962993586 39.993 2 0.15417388888749775 0.0007024369157616037 0.0027464839434566757 ['ENSG00000169583|ENST00000494426|CLIC3'] 121507 6692 VEYSEEELK True NCI_RA007_Epitope_Rep2 1124.5237348765197 1124.52262993586 30.643 2 0.15416329636344325 0.0007024369157616037 0.002747154732459402 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 72078 4055 M[Oxidation]EVKPSSVTA True H1975_Epitope_Rep2 1063.52196143515 1063.5208699358602 20.682 2 0.15415949980400712 0.0007024369157616037 0.002747395195590244 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 14744 13805 DVNAAIATIK True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 57.944 2 0.15415643550420594 0.0007024369157616037 0.002747589294810827 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 115263 15561 TREGETIIEL True PC9_epitope_Rep4 1159.6084675599898 1159.60736993586 67.777 2 0.1541532655215645 0.0007024369157616037 0.0027477901025929423 ['nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 133811 19269 VYFVAPAKF True PC9_epitope_Rep1 1040.5695033004797 1040.56840993586 78.92 2 0.15415257860963047 0.0007024369157616037 0.0027478336180919143 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 97402 10602 SEDVTPMEV True H1975_Epitope_Rep2 1005.4324773439699 1005.43197496793 45.803 1 0.15414497618968964 0.0007024369157616037 0.002748315273161982 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 21479 17761 ERLGQFMTL True PC9_epitope_Rep6 1093.55901526977 1093.5579099358602 80.951 2 0.15414404117543012 0.0007024369157616037 0.0027483745172647814 ['ENSG00000113739|ENST00000265087|STC2'] 95937 11303 RYLEKPMEI True PC9_epitope_Rep2 1177.6165301458898 1177.61488490379 48.799 3 0.15413992429614712 0.0007024369157616037 0.0027486353849236356 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 91657 15327 RISLPLPNF True NCI_RA007_Epitope_Rep5 1055.61276509479 1055.6116699358602 65.655 2 0.15413775363569596 0.0007024369157616037 0.0027487729396078148 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 116000 4683 TSLDKFYRK True NCI_RA007_Epitope_Rep3 1156.6240580544797 1156.62241490379 25.367 3 0.15413749532595003 0.0007024369157616037 0.002748789309145201 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 58607 6460 LEQSYEDPKVA True H1975_Epitope_Rep2 1277.61394686325 1277.6128499358601 29.766 2 0.15413402108259933 0.0007024369157616037 0.002749009487427422 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 24427 12017 FADGHVLEL True H1975_Epitope_Rep3 999.5025459394699 999.50144993586 51.384 2 0.15413324530633915 0.0007024369157616037 0.0027490586542273008 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 96495 8743 SADETWDSA True NCI_RA007_Epitope_Rep1 980.37231961556 980.37122993586 38.01 2 0.15412585458664405 0.0007024369157616037 0.0027495271039102345 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 1910 9301 AEIISEIRA True H1975_Epitope_Rep1 1000.55530978832 1000.55420993586 40.684 2 0.15412537704161966 0.0007024369157616037 0.002749557375122554 ['ENSG00000111331|ENST00000228928|OAS3'] 27873 14617 FQDPYTRSL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 61.047 2 0.15411521956857907 0.0007024369157616037 0.0027502013282406763 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 76089 21093 NMLPQIFRV True PC9_epitope_Rep5 1116.6113851958 1116.61028993586 86.197 2 0.15410929188922298 0.0007024369157616037 0.002750577194687912 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 26288 11747 FHGISPGL True PC9_epitope_Rep6 826.43373810366 826.43264993586 56.343 2 0.15410649946108293 0.0007024369157616037 0.00275075427667417 ['ENSG00000174282|ENST00000380599|ZBTB4'] 100277 4022 SIYRPSKNLDK True NCI_RA007_Epitope_Rep4 1319.7197493444698 1319.71810490379 21.727 3 0.15410108780089854 0.0007024369157616037 0.002751097489765484 ['ENSG00000100603|ENST00000261531|SNW1'] 74754 14735 NHASLISAL True PC9_epitope_Rep2 924.50288029264 924.50178993586 61.944 2 0.15409627135264076 0.0007024369157616037 0.00275140298980872 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 17867 8476 EHVPNSVRL True PC9_epitope_Rep3 1049.56179215109 1049.5606899358602 37.564 2 0.15409185685166 0.0007024369157616037 0.0027516830246493208 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 8063 11538 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.48637496793 49.44 1 0.15408700993933255 0.0007024369157616037 0.0027519905223261977 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 97799 9240 SELEGTPEV True H1975_Epitope_Rep2 959.4447562798299 959.4442049679301 40.498 1 0.15408560291018786 0.0007024369157616037 0.0027520797934459523 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40'] 1852 11997 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 51.154 1 0.154085008087604 0.0007024369157616037 0.0027521175337443435 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 134380 20785 VYPEYVIQY True PC9_epitope_Rep3 1172.57537652656 1172.57426993586 85.221 2 0.15407861855496066 0.0007024369157616037 0.0027525229693011726 ['ENSG00000059378|ENST00000263549|PARP12'] 45241 19888 IPTPIVGV True PC9_epitope_Rep1 794.49019035062 794.4896449679301 81.317 1 0.15407546745557069 0.0007024369157616037 0.00275272293820238 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 114000 11000 TPAPHSPWTA True PC9_epitope_Rep5 1063.50869394907 1063.50758993586 47.299 2 0.1540742882274953 0.0007024369157616037 0.0027527977757904228 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 138394 6598 YHGNTNPEL True PC9_epitope_Rep1 1043.46722305991 1043.4661299358602 30.182 2 0.1540608874932043 0.0007024369157616037 0.002753648371796948 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 27848 16138 FQDKDQVFI True PC9_epitope_Rep3 1138.56587447202 1138.56476993586 67.223 2 0.15404830520402998 0.0007024369157616037 0.0027544472564688754 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 115474 14127 TRNDYVMMY True PC9_epitope_Rep4 1191.50526544475 1191.50416993586 62.244 2 0.15403977443404893 0.0007024369157616037 0.0027549890303125574 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 1846 4290 AEIDNIKNQRA True H1975_Epitope_Rep3 1270.6629627443401 1270.66132490379 21.617 3 0.1540359503243348 0.0007024369157616037 0.002755231927121146 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 90010 8869 RDQIVTVSV True H1975_Epitope_Rep2 1015.56620882519 1015.56510993586 39.083 2 0.15403398759585024 0.0007024369157616037 0.002755356602464344 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 140384 18075 YRDWFSSQL True PC9_epitope_Rep6 1200.55637241748 1200.55526993586 82.158 2 0.15403204608793872 0.0007024369157616037 0.0027554799353797814 ['ENST00000522359.2_1_11:61630757-61632750:+|nuORF', 'nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2'] 139136 15226 YLDQMEDLY True H1975_Epitope_Rep2 1188.50089125696 1188.50037496793 63.724 1 0.15402680775403602 0.0007024369157616037 0.0027558127242903263 ['ENSG00000198356|ENST00000357332|GET3'] 111017 8681 THDDSHLVSL True PC9_epitope_Rep4 1122.5305515924601 1122.5289149037899 40.883 3 0.1540266546806185 0.0007024369157616037 0.0027558224495757176 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 134468 20782 VYPQYVIEY True PC9_epitope_Rep1 1172.57537652656 1172.57426993586 84.767 2 0.15402635049084457 0.0007024369157616037 0.0027558417759091826 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 48164 10849 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 49.49 3 0.15402627502540064 0.0007024369157616037 0.0027558465705368206 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 76599 20101 NQMDGFDTL True PC9_epitope_Rep5 1039.4280606698699 1039.42747496793 82.365 1 0.15402320282120094 0.0007024369157616037 0.002756041767268687 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 78208 20585 NYFIPSHYF True PC9_epitope_Rep5 1186.54474510462 1186.54364993586 84.228 2 0.154022098293069 0.0007024369157616037 0.0027561119483558096 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'nc|ENSG00000146414|Q149N8-5|SHPRH'] 62025 20852 LLDRFLATV True PC9_epitope_Rep3 1046.61243074162 1046.61132993586 85.48 2 0.1540219312776253 0.0007024369157616037 0.0027561225605768538 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 8879 19858 AVFPHLTVV True PC9_epitope_Rep5 981.5647522732099 981.56364993586 81.433 2 0.15400728336371064 0.0007024369157616037 0.002757053452748201 ['ENSG00000134825|ENST00000537328|TMEM258'] 107227 20460 SVITQVFHV True PC9_epitope_Rep1 1028.5654805492 1028.5643899358602 83.511 2 0.15400677119227726 0.0007024369157616037 0.002757086007516777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 90993 14442 RFEEAHFTF True PC9_epitope_Rep4 1182.5458077337796 1182.54415490379 63.46 3 0.15400155479576716 0.0007024369157616037 0.0027574175952436867 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 139137 15115 YLDQMEDLY True H1975_Epitope_Rep3 1188.50089125696 1188.49978993586 63.539 2 0.15399791955912506 0.0007024369157616037 0.0027576486977828416 ['ENSG00000198356|ENST00000357332|GET3'] 2057 7145 AELATRALP True NCI_RA007_Epitope_Rep3 940.5341804209199 940.53308993586 35.224 2 0.15399566641003995 0.0007024369157616037 0.0027577919466998386 ['ENSG00000173801|ENST00000393931|JUP'] 48188 21397 IYPSPTGVLI True PC9_epitope_Rep1 1058.60119735158 1058.60067496793 87.137 1 0.15399526806962818 0.0007024369157616037 0.0027578172728408043 ['ENSG00000174231|ENST00000304992|PRPF8'] 68344 15295 LTELPPLDDY True H1975_Epitope_Rep3 1174.57577044938 1174.5746699358601 64.24 2 0.15399135657383753 0.0007024369157616037 0.0027580659746985242 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 71498 21977 LYYDAIWHF True PC9_epitope_Rep2 1226.5760452328998 1226.57494993586 90.011 2 0.1539892879664069 0.0007024369157616037 0.002758197510534317 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 138297 6505 YHDEADQSAL True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 30.435 2 0.1539865623984028 0.0007024369157616037 0.002758370829846977 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 41128 17138 HTVGELIEV True PC9_epitope_Rep5 995.5287606873098 995.52766993586 70.942 2 0.15398265961163704 0.0007024369157616037 0.002758619027597503 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 91555 16903 RIIDVVYNA True PC9_epitope_Rep5 1061.58694426977 1061.58584993586 70.032 2 0.15398103599233068 0.0007024369157616037 0.0027587222882359684 ['ENSG00000142937|ENST00000396651|RPS8'] 118678 15257 TYTDRVFFL True NCI_RA007_Epitope_Rep5 1160.5866099165999 1160.58550993586 65.378 2 0.15397419270174342 0.0007024369157616037 0.0027591575573375636 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 8135 11078 ATEFIM[Oxidation]NEY True H1975_Epitope_Rep3 1132.47467688956 1132.47356993586 47.705 2 0.15397378194620984 0.0007024369157616037 0.002759183685717576 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 39896 19884 HPFDLGLYNEA True PC9_epitope_Rep3 1274.59315184902 1274.5920499358601 81.723 2 0.1539681677960156 0.0007024369157616037 0.0027595408295527663 ['ENSG00000106399|ENST00000223129|RPA3'] 36136 9438 GVAPFTIAR True NCI_RA007_Epitope_Rep5 930.5287011176599 930.52760993586 42.942 2 0.15396699892206972 0.0007024369157616037 0.0027596151931966327 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 111532 20026 TIAEIKNLF True PC9_epitope_Rep2 1047.59644632431 1047.5953499358602 82.434 2 0.15396242359461498 0.0007024369157616037 0.002759906294288664 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 91544 21121 RIIDSLFNTV True PC9_epitope_Rep1 1176.6502728023202 1176.64916993586 86.072 2 0.15396159434693218 0.0007024369157616037 0.002759959057703209 ['nc|ENSG00000109814|O60701-2|UGDH', 'ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH'] 42868 4133 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 21.02 2 0.15396112634491907 0.0007024369157616037 0.0027599888362034907 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 71409 21025 LYSSEQLLI True PC9_epitope_Rep2 1064.57537652656 1064.57426993586 86.325 2 0.1539600582739818 0.0007024369157616037 0.002760056797689262 ['ENSG00000168209|ENST00000307365|DDIT4'] 115549 6326 TRSITNTTV True PC9_epitope_Rep5 991.52982331647 991.52872993586 29.308 2 0.15395605647668287 0.0007024369157616037 0.0027603114473822464 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 124 20132 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.5056249679301 83.429 1 0.15395341248195707 0.0007024369157616037 0.0027604797077457454 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 95640 13877 RYDNVTILF True NCI_RA007_Epitope_Rep3 1139.5975089534697 1139.59640993586 61.908 2 0.15394874601159014 0.0007024369157616037 0.0027607767007614458 ['ENSG00000061918|ENST00000264424|GUCY1B1', 'nc|ENSG00000061918|Q02153-3|GUCY1B1'] 114828 8417 TQLQTTQSV True PC9_epitope_Rep1 1004.5138388991599 1004.51274993586 37.212 2 0.1539410441225727 0.0007024369157616037 0.0027612669497531594 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 103575 7801 SPSPPFGHSA True PC9_epitope_Rep1 982.4508447197801 982.44974993586 34.83 2 0.15393641913517486 0.0007024369157616037 0.002761561386172534 ['ENSG00000141232|ENST00000499247|TOB1'] 6943 14909 AQIKPFYTV True PC9_epitope_Rep4 1065.5858816406098 1065.58478993586 65.29 2 0.15393459298193082 0.0007024369157616037 0.0027616776515455785 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 53888 14819 KTLEGEFSV True PC9_epitope_Rep5 1008.5127762699999 1008.51166993586 62.001 2 0.15393301740225374 0.0007024369157616037 0.002761777967617486 ['ENSG00000100811|ENST00000262238|YY1', 'YY2|p.A236Qfs*6|1|0.14|ENSG00000230797|chrX:21857189-21857189|G/-|frameshift_variant', 'ENSG00000230797|ENST00000429584|YY2'] 1440 10197 AEEFVIVKA True H1975_Epitope_Rep2 1004.5542471591598 1004.55314993586 44.227 2 0.15393205984592903 0.0007024369157616037 0.002761838936343368 ['ENSG00000196455|ENST00000356763|PIK3R4'] 76511 16551 NQIKEFIYA True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 68.667 2 0.153925033561058 0.0007024369157616037 0.0027622863491284207 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 74673 11292 NGNPITIFQER True H1975_Epitope_Rep1 1287.6571490879098 1287.6560499358602 48.412 2 0.1539179380421272 0.0007024369157616037 0.0027627382438605427 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH'] 142757 19523 YYQRGSSMVLF True PC9_epitope_Rep1 1349.64380752289 1349.64270993586 79.916 2 0.15391356359613803 0.0007024369157616037 0.0027630168774169152 ['ENSG00000171867|ENST00000379440|PRNP'] 61102 21908 LIIDEIHLL True PC9_epitope_Rep5 1077.64339651673 1077.6422899358602 89.309 2 0.15390635239624312 0.0007024369157616037 0.002763476261258841 ['ENSG00000112249|ENST00000369162|ASCC3'] 112391 20231 TLATDILM[Oxidation]GV True PC9_epitope_Rep6 1048.547447907 1048.54634993586 90.501 2 0.15389703228138749 0.0007024369157616037 0.002764070104680226 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 114960 19301 TQVTALIKL True PC9_epitope_Rep1 985.61718176889 985.61608993586 79.046 2 0.15389390356812635 0.0007024369157616037 0.0027642694832960093 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 54925 16781 KYPSPFFVF True NCI_RA007_Epitope_Rep4 1130.5800679841798 1130.5789699358602 72.732 2 0.1538930659305749 0.0007024369157616037 0.0027643228645469844 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 32751 7571 GHATPVSSL True PC9_epitope_Rep1 867.4450310633501 867.44392993586 33.939 2 0.15388341436176758 0.0007024369157616037 0.002764938017154692 ['ENSG00000163811|ENST00000407426|WDR43'] 43900 19161 IHYYEQITL True PC9_epitope_Rep1 1178.5971746002997 1178.5960699358602 78.498 2 0.15388029283574525 0.0007024369157616037 0.002765137000012578 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4'] 71740 11010 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43227496793 47.377 1 0.153870818827767 0.0007024369157616037 0.0027657410116579064 ['ENSG00000026025|ENST00000544301|VIM'] 69891 17225 LVIIESDLER True PC9_epitope_Rep1 1185.66050313285 1185.6594099358601 71.074 2 0.15386958798129924 0.0007024369157616037 0.002765819493443114 ['ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 2812 5946 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep3 863.3694835450299 863.36893496793 27.882 1 0.1538677554386607 0.0007024369157616037 0.002765936344963209 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 128762 18806 VPYLVGQVV True PC9_epitope_Rep6 972.5644179200399 972.56332993586 84.979 2 0.15386500931262515 0.0007024369157616037 0.0027661114600623857 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 76594 20177 NQMDGFDTL True PC9_epitope_Rep1 1039.4280606698699 1039.4269699358601 82.44 2 0.15386498055958178 0.0007024369157616037 0.0027661132936463275 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 111543 7548 TIAPALVSK True NCI_RA007_Epitope_Rep2 898.5487678559 898.54766993586 33.986 2 0.15386015318454563 0.0007024369157616037 0.0027664211529292515 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 45142 17651 IPNPAQTSVVV True PC9_epitope_Rep2 1123.62372370131 1123.62262993586 73.174 2 0.15385433491635156 0.0007024369157616037 0.0027667922504718725 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 29492 21751 FVFPGELLL True H1975_Epitope_Rep2 1033.5848190114498 1033.5837299358602 89.972 2 0.1538527798162552 0.0007024369157616037 0.0027668914454048303 ['ENSG00000105281|ENST00000542575|SLC1A5'] 141174 19178 YSVDRLYEL True PC9_epitope_Rep2 1156.5764391557198 1156.57534993586 79.142 2 0.15385230087682575 0.0007024369157616037 0.0027669219961553417 ['ENSG00000084774|ENST00000264705|CAD'] 13280 18087 DLTEYLSR True PC9_epitope_Rep1 995.49237517859 995.49126993586 74.366 2 0.15384991127991074 0.0007024369157616037 0.00276707442959724 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 88199 18199 QRYNSFISL True PC9_epitope_Rep2 1126.5771078620598 1126.5760099358602 75.309 2 0.15384865948156465 0.0007024369157616037 0.0027671542857077218 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 7043 19565 AQQELKLLL True PC9_epitope_Rep5 1054.6386454894598 1054.63754993586 80.306 2 0.15384503476094413 0.0007024369157616037 0.0027673855308697837 ['ENSG00000119041|ENST00000263956|GTF3C3'] 108321 7937 SYISRTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 39.972 2 0.15384340669388052 0.0007024369157616037 0.0027674894024221487 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 28914 11843 FTDIDGQVY True H1975_Epitope_Rep1 1056.4763907612798 1056.47587496793 50.551 1 0.1538409863680711 0.0007024369157616037 0.002767643827691621 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 73052 18191 MRDPIRILV True PC9_epitope_Rep5 1111.65358436095 1111.65248993586 74.981 2 0.15383964595062724 0.0007024369157616037 0.002767729354718528 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 116724 11179 TVDGVVFHY True H1975_Epitope_Rep3 1035.50254593947 1035.5014499358601 48.098 2 0.15383704093426168 0.0007024369157616037 0.00276789557861201 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant', 'nc|ENSG00000038427|P13611-4|VCAN'] 108952 8912 TAEDLFEAR True H1975_Epitope_Rep1 1050.4981888350198 1050.49708993586 39.183 2 0.153836399281713 0.0007024369157616037 0.002767936523446617 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 17641 12322 EHITSEYTL True PC9_epitope_Rep2 1091.5135045459901 1091.5124099358602 52.708 2 0.1538344593765983 0.0007024369157616037 0.0027680603154436744 ['ENSG00000179094|ENST00000317276|PER1', 'nc|ENSG00000179094|O15534-4|PER1', 'ENST00000579065.1_1_17:8052750-8054072:-|nuORF'] 106001 5983 SSVENIQRV True PC9_epitope_Rep6 1030.5407223533398 1030.5396299358601 31.329 2 0.15382702960224404 0.0007024369157616037 0.0027685344858727305 ['ENSG00000173801|ENST00000393931|JUP'] 47849 9078 IYHNPTANSF True PC9_epitope_Rep4 1162.54072235334 1162.5396299358601 42.501 2 0.15382195902673323 0.0007024369157616037 0.002768858138011167 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 105835 5919 SSLNLRET True NCI_RA007_Epitope_Rep2 918.47705946762 918.47596993586 27.64 2 0.15381465042189393 0.0007024369157616037 0.0027693247087380063 ['ENSG00000026025|ENST00000544301|VIM'] 107894 21218 SVVPQQLLTV True PC9_epitope_Rep5 1082.63356010902 1082.6324699358602 86.663 2 0.15381369693199595 0.0007024369157616037 0.002769385583928667 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 97316 5069 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 24.58 2 0.1538121292614027 0.0007024369157616037 0.002769485674145988 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 105052 6195 SRDPSTNVI True PC9_epitope_Rep4 987.49852318819 987.4974299358599 30.867 2 0.15379268844499644 0.0007024369157616037 0.0027707272011417883 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000509683.5_1_4:42065060-42077708:+|nuORF'] 48162 13033 IYPPKLHQF True PC9_epitope_Rep3 1141.62841515893 1141.62676490379 55.158 3 0.15379211288840647 0.0007024369157616037 0.0027707639657200576 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 62626 22737 LLLDVTPLSL True PC9_epitope_Rep4 1082.6587122277 1082.6576099358601 95.676 2 0.15378900192482403 0.0007024369157616037 0.002770962691807765 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 90352 11675 REFSDFIRV True NCI_RA007_Epitope_Rep4 1167.6036569630699 1167.60254993586 51.868 2 0.15378582321984155 0.0007024369157616037 0.0027711657598430816 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 58582 8236 LEQPTDPVA True H1975_Epitope_Rep2 968.4814761417199 968.48092496793 36.63 1 0.1537830719694536 0.0007024369157616037 0.002771341532393716 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 109292 21705 TAVPSLFSV True PC9_epitope_Rep2 919.50148331031 919.50038993586 88.965 2 0.15378285459272362 0.0007024369157616037 0.0027713554206846083 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 106377 22916 STIDILYQL True PC9_epitope_Rep1 1064.57537652656 1064.57426993586 92.944 2 0.15377684424086724 0.0007024369157616037 0.002771739452079777 ['ENSG00000115760|ENST00000421745|BIRC6'] 76519 19394 NQINGSFAL True PC9_epitope_Rep1 962.48214484806 962.48104993586 79.41 2 0.15377607883391706 0.0007024369157616037 0.002771788361560135 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 106827 15592 SVAQDIPKL True PC9_epitope_Rep5 969.5494961318899 969.54838993586 64.983 2 0.15377395519618658 0.0007024369157616037 0.0027719240664503073 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 35119 15854 GQVVHLTLV True PC9_epitope_Rep4 964.57056592964 964.56946993586 68.911 2 0.1537739236129666 0.0007024369157616037 0.0027719260847340723 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ'] 97446 13475 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.40686993586 56.948 2 0.15376944855106564 0.0007024369157616037 0.0027722120724362905 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 48901 4365 KEDKPPLAP True H1975_Epitope_Rep2 993.5494961318898 993.54838993586 21.903 2 0.15376652368438928 0.0007024369157616037 0.0027723990077345106 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 128067 11295 VPLAIVNKA True PC9_epitope_Rep2 923.58040233735 923.57930993586 48.769 2 0.1537645015443256 0.0007024369157616037 0.002772528254940173 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54568 7732 KYISKPENL True PC9_epitope_Rep3 1090.60225998074 1090.60116993586 34.735 2 0.15375353242396866 0.0007024369157616037 0.0027732294624590536 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 763 10202 AAVPRAAFL True H1975_Epitope_Rep3 914.5337864980999 914.53268993586 44.287 2 0.1537533667248589 0.0007024369157616037 0.0027732400562281963 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 61372 5452 LITEDVQGK True H1975_Epitope_Rep3 1001.5393253710098 1001.53822993586 26.027 2 0.1537506627497345 0.0007024369157616037 0.0027734129372586837 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 87476 9614 QQDPQQYNV True PC9_epitope_Rep5 1118.49925146418 1118.49814993586 41.944 2 0.15374818655553443 0.0007024369157616037 0.0027735712643393883 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 25717 9175 FESIIKEAA True H1975_Epitope_Rep2 1006.5335117145798 1006.53240993586 40.244 2 0.15374743928591653 0.0007024369157616037 0.002773619046294277 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5'] 125963 18313 VLDILLEQY True H1975_Epitope_Rep2 1104.60667665484 1104.60556993586 75.941 2 0.1537454611683101 0.0007024369157616037 0.002773745535159999 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 9509 5428 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 28.791 2 0.1537408357038171 0.0007024369157616037 0.0027740413285714397 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 98418 8818 SFEPFSNK True NCI_RA007_Epitope_Rep1 954.44469671018 954.44358993586 38.303 2 0.15373973037820216 0.0007024369157616037 0.002774112017594286 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 47280 7834 IVDHNIADY True H1975_Epitope_Rep2 1058.50327421546 1058.5021699358601 35.082 2 0.15373790212007113 0.0007024369157616037 0.0027742289443493363 ['ENSG00000174231|ENST00000304992|PRPF8'] 21233 14347 ERDPSPWAV True PC9_epitope_Rep1 1055.50360856863 1055.5025099358602 60.009 2 0.15373636575355762 0.0007024369157616037 0.002774327206894173 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 77818 14963 NVDAILEEY True H1975_Epitope_Rep3 1064.50260550912 1064.50207496793 62.943 1 0.15373227071714013 0.0007024369157616037 0.0027745891331569525 ['ENSG00000123562|ENST00000441076|MORF4L2'] 95224 20996 RVLELIPQI True PC9_epitope_Rep3 1079.6702799709099 1079.66918993586 86.037 2 0.15372967555185668 0.0007024369157616037 0.002774755137590791 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1', 'ENST00000404284.6_1_22:35717823-35727385:+|nuORF'] 90496 5911 RELEQRVSL True NCI_RA007_Epitope_Rep5 1128.62512068364 1128.6234749037899 29.422 3 0.15372099439122544 0.0007024369157616037 0.0027753105156667576 ['ENSG00000160551|ENST00000261716|TAOK1', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 52611 19654 KLLPQLTYL True PC9_epitope_Rep4 1087.66413196131 1087.66302993586 83.718 2 0.153717708562798 0.0007024369157616037 0.0027755207557605696 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 21677 4862 ERSGVNSEL True PC9_epitope_Rep2 989.47778774361 989.47668993586 24.07 2 0.15371542243142286 0.0007024369157616037 0.00277566704071117 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 65339 18462 LRDGQILEL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 75.805 2 0.15371316015405867 0.0007024369157616037 0.0027758118068575807 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 87922 8416 QRLAEPSQL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 39.836 2 0.15370902606577047 0.0007024369157616037 0.002776076372126783 ['ENSG00000173801|ENST00000393931|JUP'] 127279 19527 VMAPRALLL True PC9_epitope_Rep3 982.5997578829398 982.59866993586 80.342 2 0.15367473594098957 0.0007024369157616037 0.0027782717734026806 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 54030 10862 KVIDDTNITRL True PC9_epitope_Rep6 1286.7194149913 1286.71777490379 52.64 3 0.15367209185088704 0.0007024369157616037 0.0027784411312796534 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 134143 17803 VYLDKFIRL True PC9_epitope_Rep6 1165.68593003505 1165.68427490379 81.112 3 0.15367119150549802 0.0007024369157616037 0.0027784988020805854 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 113576 21680 TLVDEVFRI True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 88.439 2 0.15366753147637205 0.0007024369157616037 0.0027787332541862144 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 27871 19027 FQDPVPLTV True PC9_epitope_Rep6 1014.5385970950199 1014.53750993586 85.829 2 0.15366722365910854 0.0007024369157616037 0.0027787529730719206 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 133858 20292 VYGPLPQSF True PC9_epitope_Rep2 1006.5123823471798 1006.51128993586 83.475 2 0.15366322041896494 0.0007024369157616037 0.002779009434793635 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 96194 9708 RYPDSHQLF True PC9_epitope_Rep6 1161.55670677065 1161.5550749037902 47.739 3 0.15366230875836703 0.0007024369157616037 0.0027790678422942435 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 6694 8432 AQAFIHNSL True NCI_RA007_Epitope_Rep4 999.5137793295099 999.51268993586 39.248 2 0.15365995228395393 0.0007024369157616037 0.0027792188205747067 ['ENSG00000225921|ENST00000451315|NOL7'] 126008 19978 VLDSEGYLLFY True H1975_Epitope_Rep2 1317.6492697428098 1317.64816993586 82.823 2 0.1536595214526526 0.0007024369157616037 0.0027792464246310005 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 83294 10661 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 46.032 2 0.1536594288884559 0.0007024369157616037 0.002779252355404035 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 21163 12189 ERDAYVQAL True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 51.743 2 0.15365389690010792 0.0007024369157616037 0.0027796068238594394 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 47424 21339 IVLPEDLQL True PC9_epitope_Rep4 1038.5961119711399 1038.5950099358602 90.248 2 0.15365043320019237 0.0007024369157616037 0.002779828787319487 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 106745 17659 STYEGKPIFL True PC9_epitope_Rep1 1153.60192562757 1153.60082993586 72.72 2 0.15364380472708497 0.0007024369157616037 0.0027802536074508395 ['ANKEF1|p.K510Rfs*11|1|0.36|ENSG00000132623|chr20:10050094-10050094|A/-|frameshift_variant', 'ANKEF1|p.A631Cfs*6|1|0.37|ENSG00000132623|chr20:10053129-10053130|-/T|frameshift_variant', 'ENSG00000132623|ENST00000378392|ANKEF1'] 116260 12091 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 51.521 1 0.1536428557763851 0.0007024369157616037 0.002780314431181418 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 106644 6557 STSQTFIYK True NCI_RA007_Epitope_Rep3 1073.5393253710097 1073.53822993586 32.844 2 0.153642330056192 0.0007024369157616037 0.002780348128195629 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 137129 7622 YASVLTAQPR True NCI_RA007_Epitope_Rep1 1104.5927579262 1104.5916699358602 33.641 2 0.15363233238494214 0.0007024369157616037 0.002780989025034807 ['ENSG00000167658|ENST00000309311|EEF2'] 36268 9845 GVDVTGPHLY True H1975_Epitope_Rep3 1056.52400966004 1056.52290993586 42.899 2 0.15363149648515315 0.0007024369157616037 0.00278104261673742 ['ENSG00000136930|ENST00000259457|PSMB7'] 11822 17856 DHFRLGSVL True PC9_epitope_Rep1 1042.55597849466 1042.55488993586 73.477 2 0.15362877578777348 0.0007024369157616037 0.0027812170548287074 ['ENSG00000158435|ENST00000289382|CNOT11'] 84253 22763 PYNDYFEYF True PC9_epitope_Rep3 1256.50260550912 1256.5015099358602 92.827 2 0.15362722372758802 0.0007024369157616037 0.0027813165703833615 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 95682 16508 RYFENPQVI True PC9_epitope_Rep3 1164.5927579262 1164.5916699358602 68.634 2 0.1536233450197415 0.0007024369157616037 0.00278156528229147 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 77433 8322 NSLPDTVQIR True H1975_Epitope_Rep1 1141.6091362663299 1141.60802993586 36.942 2 0.15361815556453023 0.0007024369157616037 0.002781898077091004 ['ENSG00000242372|ENST00000374450|EIF6'] 127281 19402 VMAPRALLL True PC9_epitope_Rep5 982.5997578829398 982.59866993586 79.676 2 0.15361492797867846 0.0007024369157616037 0.0027821050791040805 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 93456 2933 RQHNTEIRM True NCI_RA007_Epitope_Rep4 1183.5880239822698 1183.58638490379 16.416 3 0.1536112585851896 0.0007024369157616037 0.0027823404352097557 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15'] 28986 9881 FTEEELARY True H1975_Epitope_Rep3 1156.5400536469997 1156.53894993586 43.038 2 0.15360174391287298 0.0007024369157616037 0.002782950801881186 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 52559 18435 KLGDFGLATV True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 78.979 2 0.1535994199471044 0.0007024369157616037 0.0027830999046741163 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 5557 19106 AMSSKFFLV True PC9_epitope_Rep4 1028.5364889200398 1028.5353899358602 81.583 2 0.1535983110836554 0.0007024369157616037 0.0027831710507990343 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 17539 19186 EHGNFLITV True PC9_epitope_Rep1 1028.52909504048 1028.52857496793 78.594 1 0.1535981808036214 0.0007024369157616037 0.0027831794098549284 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 18351 7115 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.60436490379 31.666 3 0.1535971852847076 0.0007024369157616037 0.0027832432853823865 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 24167 11703 EYQIKTNQL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 49.89 2 0.15359488423896775 0.0007024369157616037 0.002783390933082336 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF', 'ENST00000602395.1_1_10:22607528-22615407:+|nuORF', 'ENST00000496071.5_1_10:22607528-22608924:+|nuORF', 'ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3'] 137507 6498 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 29.911 1 0.1535872557150884 0.0007045974986788797 0.0027838804768153627 ['ENSG00000127184|ENST00000247655|COX7C'] 78602 18475 NYSNIRFQF True PC9_epitope_Rep4 1187.57235683479 1187.5712499358601 79.135 2 0.15358400756979718 0.0007045974986788797 0.0027840889454435044 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 110334 5365 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.43850993586 25.679 2 0.153578294071555 0.0007045974986788797 0.002784455680207113 ['ENSG00000167470|ENST00000682408|MIDN'] 109105 17531 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.5744349679301 72.438 1 0.1535702301050195 0.0007045974986788797 0.002784973367434948 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 87445 10805 QPYQPLREV True PC9_epitope_Rep4 1128.5927579261997 1128.5916699358602 49.32 2 0.15356883687392975 0.0007045974986788797 0.002785062819234692 ['ENST00000547003.1_1_12:49916566-49919899:+|nuORF', 'ENST00000549412.5_2_12:49906680-49920035:+|nuORF', 'ENSG00000123352|ENST00000552918|SPATS2'] 140186 9068 YQTEKGITV True PC9_epitope_Rep5 1037.5393253710097 1037.53822993586 39.825 2 0.15356188684704575 0.0007045974986788797 0.0027855090854859493 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 111278 13099 THLLNQDTL True PC9_epitope_Rep3 1053.54547338061 1053.54436993586 55.409 2 0.15355769431307578 0.0007045974986788797 0.0027857783255919406 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 125283 15994 VILPTVHEV True PC9_epitope_Rep5 1005.5858816406101 1005.58478993586 66.511 2 0.15354883410492648 0.0007045974986788797 0.002786347404150353 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 140797 8622 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 38.122 2 0.15354683089485774 0.0007045974986788797 0.002786476083542673 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 125078 5100 VIDYNGER True NCI_RA007_Epitope_Rep2 964.4614094034799 964.46030993586 24.462 2 0.15354370758466704 0.0007045974986788797 0.002786676726170415 ['ENSG00000185624|ENST00000331483|P4HB', 'P4HB|p.R452S|1|0.24|ENSG00000185624|chr17:81845564-81845564|C/G|missense_variant'] 29420 11795 FVDSSVGYY True H1975_Epitope_Rep2 1035.45492704071 1035.4543749679299 50.443 1 0.15354109284702994 0.0007045974986788797 0.002786844708979863 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'ENST00000492816.6_1_2:216257645-216258011:-|nuORF'] 111115 7271 THEEAVTAL True PC9_epitope_Rep4 969.4767251144499 969.47562993586 35.282 2 0.15354089872218685 0.0007045974986788797 0.002786857180857932 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 8500 5753 ATSEIFASK True NCI_RA007_Epitope_Rep5 952.48656152216 952.48546993586 28.817 2 0.15354058611896362 0.0007045974986788797 0.00278687726469636 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant'] 28154 15633 FRDHLEEVL True PC9_epitope_Rep5 1156.58767254576 1156.58602490379 65.143 3 0.15353104445578758 0.0007045974986788797 0.002787490357930413 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 812 9467 AAYYHPSYL True H1975_Epitope_Rep3 1083.5025459394699 1083.5014499358601 41.419 2 0.1535278874008989 0.0007045974986788797 0.002787693241996896 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 45351 13504 IQDEKYYQI True PC9_epitope_Rep5 1198.58700383942 1198.5859099358602 56.963 2 0.15352101384417627 0.0007045974986788797 0.002788135013179807 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8', 'nc|ENSG00000147099|Q9BY41-6|HDAC8', 'nc|ENSG00000147099|Q9BY41-5|HDAC8'] 114930 11410 TQTAVITRI True PC9_epitope_Rep3 1001.5869442697699 1001.58584993586 48.89 2 0.15351668971290564 0.0007045974986788797 0.0027884129656951602 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 21283 14424 ERDVSLTSL True PC9_epitope_Rep5 1018.5294889633 1018.52838993586 60.481 2 0.1535089176620727 0.0007045974986788797 0.002788912617812583 ['ENSG00000179409|ENST00000319004|GEMIN4'] 128871 14187 VQDRFEVNV True PC9_epitope_Rep5 1104.55637241748 1104.55526993586 59.578 2 0.15350495686509463 0.0007045974986788797 0.0027891672851387884 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 11910 18441 DHLLSVSL True PC9_epitope_Rep4 882.4810822189 882.47998993586 79.004 2 0.15350350048582231 0.0007045974986788797 0.0027892609317718715 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 84171 22395 PYISNIYLI True PC9_epitope_Rep2 1094.60119735158 1094.60010993586 91.637 2 0.15350200789950783 0.0007045974986788797 0.0027893569098057223 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 113647 15711 TLVYHVVGV True PC9_epitope_Rep2 985.5596668927699 985.55856993586 65.706 2 0.15349318281096616 0.0007045974986788797 0.0027899244582677164 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 76747 15507 NQVLNLIKA True PC9_epitope_Rep4 1011.6076797143498 1011.60658993586 67.572 2 0.1534914547904475 0.0007045974986788797 0.0027900356021170964 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 105769 3577 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 19.789 2 0.153475874724174 0.0007045974986788797 0.0027910378893752155 ['ENSG00000115207|ENST00000264720|GTF3C2'] 131684 5845 VTNDGATILK True NCI_RA007_Epitope_Rep4 1030.56587447202 1030.56476993586 29.107 2 0.1534751789526207 0.0007045974986788797 0.0027910826576945796 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 107414 19454 SVLNVLHSL True PC9_epitope_Rep4 980.5654805492 980.56438993586 82.945 2 0.15347329923644817 0.0007045974986788797 0.002791203608635692 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L'] 77431 12987 NSLKQLYTV True PC9_epitope_Rep4 1064.5866099165999 1064.58550993586 57.847 2 0.1534637458340381 0.0007045974986788797 0.002791818406141823 ['ENSG00000135372|ENST00000257829|NAT10', 'NAT10|p.D856Tfs*36|1|0.2|ENSG00000135372|chr11:34140542-34140542|G/-|frameshift_variant', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 24453 21670 FADPDDFTL True PC9_epitope_Rep5 1039.4498416602698 1039.4487499358602 88.4 2 0.1534594716825298 0.0007045974986788797 0.002792093507627943 ['ENSG00000180921|ENST00000388913|FAM83H', 'FAM83H|p.A493P|1|0.23|ENSG00000180921|chr8:143727984-143727984|C/G|missense_variant'] 76501 19730 NQIGAKFWEV True PC9_epitope_Rep5 1190.60840799034 1190.60730993586 80.938 2 0.15345574251658173 0.0007045974986788797 0.0027923335537363464 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 1223 5941 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54561490379 27.834 3 0.15344204453248267 0.0007045974986788797 0.002793215468431668 ['ENSG00000154124|ENST00000284274|OTULIN'] 63018 17475 LLPSRQFGF True PC9_epitope_Rep4 1063.5814649665099 1063.58036993586 75.217 2 0.15344132969927624 0.0007045974986788797 0.0027932614990233365 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 55053 5733 KYSSGFRNI True NCI_RA007_Epitope_Rep4 1070.55089311422 1070.5497899358602 28.669 2 0.15343531520269246 0.0007045974986788797 0.00279364882328358 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant'] 74949 19623 NHMAVAFVL True PC9_epitope_Rep2 1000.5164221818 1000.51532993586 80.864 2 0.15342981939735428 0.0007045974986788797 0.002794002791440287 ['ENSG00000164919|ENST00000520468|COX6C'] 8202 6700 ATFPDPNVK True NCI_RA007_Epitope_Rep3 987.5025459394699 987.50144993586 33.437 2 0.15342941727246026 0.0007045974986788797 0.002794028692840465 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 35022 7925 GQVALRTSL True NCI_RA007_Epitope_Rep5 943.54507945779 943.5439899358599 37.175 2 0.15342792204409547 0.0007045974986788797 0.0027941250045911232 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 48019 14044 IYLLIHNNF True NCI_RA007_Epitope_Rep5 1145.62332977849 1145.62222993586 60.711 2 0.15342424908900718 0.0007045974986788797 0.0027943616037283815 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 34907 17786 GQMGSFIRL True PC9_epitope_Rep4 1007.5222358382299 1007.52112993586 76.442 2 0.15341858949068732 0.0007045974986788797 0.0027947262146858325 ['ENSG00000119392|ENST00000309971|GLE1'] 96632 7062 SAIDTREEL True NCI_RA007_Epitope_Rep5 1032.50875351872 1032.5076499358602 33.844 2 0.15341623127832363 0.0007045974986788797 0.002794878152903187 ['nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170'] 32015 12796 GEQLTLPPPP True H1975_Epitope_Rep2 1047.5600608155898 1047.5589699358602 54.326 2 0.15341528626919732 0.0007045974986788797 0.0027949390415889044 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000272391|A8CG34|POM121C', 'POM121C|p.F573Cfs*82|1|0.2|ENSG00000272391|chr7:75422534-75422535|-/C|frameshift_variant', 'POM121C|p.Q618Lfs*51|1|0.06|ENSG00000272391|chr7:75422384-75422399|GGAGGTTTGCCAAACT/-|frameshift_variant', 'nc|ENSG00000205578|A6NF01|POM121B', 'nc|ENSG00000196313|Q96HA1-2|POM121', 'ENSG00000272391|ENST00000615331|POM121C', 'nc|ENSG00000196313|Q96HA1-3|POM121', 'POM121|p.R515Q|1|0.19|ENSG00000196313|chr7:72939949-72939949|G/A|missense_variant'] 108358 15290 SYLEAFYKF True NCI_RA007_Epitope_Rep3 1166.5648118428599 1166.56370993586 67.695 2 0.15341089096499244 0.0007045974986788797 0.002795222256544611 ['ENSG00000147614|ENST00000285393|ATP6V0D2'] 73158 8361 MRSPQMVSA True PC9_epitope_Rep3 1005.47357139365 1005.47246993586 37.13 2 0.15341030464121333 0.0007045974986788797 0.0027952600389505775 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 39064 7642 HHSNLIAGM True PC9_epitope_Rep2 978.47053461854 978.46942993586 34.763 2 0.1534055322492713 0.0007045974986788797 0.002795567588393952 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 28194 15552 FREDSTLAL True PC9_epitope_Rep1 1050.53457434374 1050.53346993586 64.644 2 0.15340238169993423 0.0007045974986788797 0.0027957706391732733 ['ENSG00000197077|ENST00000358431|KIAA1671'] 141341 9368 YTDTYTEAY True H1975_Epitope_Rep2 1125.4502355830898 1125.44967496793 40.995 1 0.15339922457952335 0.0007045974986788797 0.0027959741282006043 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 93512 18909 RQLDMELVSV True PC9_epitope_Rep2 1188.61725842188 1188.6161699358602 78.096 2 0.15339297026915635 0.0007045974986788797 0.0027963772870904864 ['ENSG00000089902|ENST00000262241|RCOR1'] 84876 5562 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 26.438 2 0.15339262174747237 0.0007045974986788797 0.0027963997548394086 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 90497 3922 RELEVQHPA True NCI_RA007_Epitope_Rep4 1077.55670677065 1077.55560993586 21.318 2 0.1533912206918223 0.0007045974986788797 0.0027964900769077237 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 116925 15560 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep4 1178.5641606002998 1178.56306993586 67.773 2 0.1533891195418051 0.0007045974986788797 0.002796625537517032 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 4361 10034 AILLPQPPK True NCI_RA007_Epitope_Rep4 975.61170246563 975.61060993586 45.438 2 0.15338174386930858 0.0007045974986788797 0.0027971010970326334 ['nc|ENSG00000132256|Q9C035-4|TRIM5', 'ENST00000437681.1_1_1:28835797-28835884:+|nuORF', 'AluSq_dup1109|chr1:161212562-161212852:-|1.1902309979621175|0.0170353827791468|6.13|540.0|13|1|anti-sense', 'ENST00000483835.5_1_11:5685320-5686489:-|nuORF', 'ENST00000608290.1_1_22:46409584-46410459:+|nuORF', 'ENST00000567741.1_1_1:25644693-25663698:-|nuORF', 'ENST00000591166.1_1_17:42259005-42263988:-|nuORF', 'ENST00000585457.5_1_17:42259005-42264009:-|nuORF', 'nc|ENSG00000204370|O14521-4|SDHD', 'nc|ENSG00000137090|Q9Y5R6-3|DMRT1', 'ENST00000496007.5_1_1:1324344-1326370:-|nuORF', 'ENST00000452360.6_1_4:942397-950358:+|nuORF'] 138296 6416 YHDEADQSAL True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 30.087 2 0.15337969243413693 0.0007045974986788797 0.0027972333812668853 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 2417 10339 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 44.777 2 0.15337940875374032 0.0007045974986788797 0.002797251674533653 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 59025 5264 LEVPESHTA True H1975_Epitope_Rep2 981.4767251144501 981.47562993586 25.316 2 0.1533786009822962 0.0007045974986788797 0.0027973037647168113 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1', 'ENST00000552771.5_1_16:15690552-15694435:-|nuORF'] 35261 7689 GRDENSVEL True PC9_epitope_Rep5 1017.4727023631699 1017.47160993586 34.519 2 0.1533733377575408 0.0007045974986788797 0.0027976431942271724 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 133951 16415 VYILQPEVI True NCI_RA007_Epitope_Rep4 1072.6168474157198 1072.61574993586 71.146 2 0.1533675711198698 0.0007045974986788797 0.0027980151363649636 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 104810 7520 SRAAEKLYL True PC9_epitope_Rep2 1049.58694426977 1049.58584993586 34.293 2 0.15336548620091806 0.0007045974986788797 0.0027981496236023466 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 40332 11867 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5439899358599 53.422 2 0.15335317109168337 0.0007045974986788797 0.0027989441384505126 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 104920 17549 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.4909699358602 72.51 2 0.15335212982756544 0.0007045974986788797 0.0027990113263858907 ['ENSG00000113387|ENST00000265073|SUB1'] 142329 10505 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 45.728 2 0.15335085210307067 0.0007045974986788797 0.0027990937742073665 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 72206 16494 MHAETAFESL True PC9_epitope_Rep3 1134.5015599633 1134.50046993586 68.581 2 0.1533474929862595 0.0007045974986788797 0.0027993105397300564 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 21391 10400 ERIGETPEL True PC9_epitope_Rep6 1042.5294889632999 1042.52838993586 50.738 2 0.1533449543301119 0.0007045974986788797 0.0027994743716083224 ['ENSG00000168806|ENST00000305641|LCMT2'] 75285 19034 NIIPRFVQV True PC9_epitope_Rep4 1084.6393141958001 1084.63820993586 81.303 2 0.15334090130688385 0.0007045974986788797 0.0027997359527992156 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 139072 15105 YLDDPTNSWY True H1975_Epitope_Rep1 1272.52988288612 1272.52878993586 63.355 2 0.15334049784837916 0.0007045974986788797 0.0027997619932519737 ['ENSG00000064195|ENST00000434704|DLX3'] 24572 16362 FAHPYQYEL True PC9_epitope_Rep5 1166.53965972418 1166.53856993586 67.934 2 0.15333943590588434 0.0007045974986788797 0.002799830535440674 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 41411 16772 HYGLPVVV True PC9_epitope_Rep4 882.49633836022 882.49524993586 72.48 2 0.1533382012001754 0.0007045974986788797 0.002799910230589164 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 77317 15426 NSDPNLHLL True PC9_epitope_Rep5 1021.5192586327701 1021.51816993586 64.345 2 0.15333343283726092 0.0007045974986788797 0.0028002180299285524 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 74951 18918 NHMAVAFVL True PC9_epitope_Rep4 1000.5164221818 1000.51532993586 80.855 2 0.15333278892251978 0.0007045974986788797 0.0028002595974141284 ['ENSG00000164919|ENST00000520468|COX6C'] 38481 6875 HEQFKATLP True H1975_Epitope_Rep3 1069.55564414149 1069.5545499358602 31.403 2 0.1533248212384892 0.0007045974986788797 0.00280077399682243 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 15089 19803 DYTIGFGKF True PC9_epitope_Rep4 1046.50729696674 1046.5061899358602 84.299 2 0.1533210853441558 0.0007045974986788797 0.0028010152212797367 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 69253 12667 LTTEVHPEL True PC9_epitope_Rep1 1037.5393253710097 1037.53822993586 53.595 2 0.153317576576387 0.0007045974986788797 0.002801241799169393 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3', 'ERGIC3|p.Y48C|1|0.27|ENSG00000125991|chr20:35542377-35542377|A/G|missense_variant'] 53224 6960 KQFEKQVEL True PC9_epitope_Rep2 1147.6237237013097 1147.62208490379 32.169 3 0.1533156520519705 0.0007045974986788797 0.0028013660826588264 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 134302 16592 VYNPVRAEW True PC9_epitope_Rep3 1132.5665431783598 1132.5654499358602 68.958 2 0.15330962000087162 0.0007045974986788797 0.0028017556609297328 ['ENSG00000165572|ENST00000379485|KBTBD6'] 140104 9831 YQNENEVGV True PC9_epitope_Rep1 1050.4618033262998 1050.4607099358602 42.676 2 0.1533045521690966 0.0007045974986788797 0.002802083007118279 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF', 'AKR1B1|p.V48M|1|0.32|ENSG00000085662|chr7:134451678-134451678|C/T|missense_variant'] 71430 17619 LYTEKFEEF True PC9_epitope_Rep2 1204.5652057656796 1204.56467496793 73.05 1 0.15330358771673036 0.0007045974986788797 0.002802145308256353 ['ENSG00000084652|ENST00000373610|TXLNA'] 132491 15197 VVDIQGVGDLY True H1975_Epitope_Rep3 1176.6026539035597 1176.60154993586 63.858 2 0.1532962262529923 0.0007045974986788797 0.0028026208853387446 ['ENSG00000103319|ENST00000263026|EEF2K'] 129289 20066 VQVPVPVTV True PC9_epitope_Rep5 936.5644179200399 936.56332993586 82.237 2 0.1532932161448903 0.0007045974986788797 0.002802815372341635 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 9707 9818 AYGKDFHLI True NCI_RA007_Epitope_Rep4 1062.5498304850598 1062.5487299358601 44.614 2 0.15328251779119406 0.0007045974986788797 0.0028035067157782035 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'MIER1|p.K332Nfs*25|1|0.17|ENSG00000198160|chr1:66976643-66976643|A/-|frameshift_variant', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 94901 9774 RTEFNLNQY True H1975_Epitope_Rep2 1183.56218607391 1183.56108993586 42.582 2 0.15327205879963476 0.0007045974986788797 0.0028041827555891495 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 98165 5001 SESSDVLPK True NCI_RA007_Epitope_Rep4 960.47639076128 960.47528993586 25.717 2 0.15327019609448345 0.0007045974986788797 0.002804303172658688 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 130109 6208 VSDPSSPQY True H1975_Epitope_Rep2 978.42944056886 978.42834993586 28.849 2 0.1532671254710992 0.0007045974986788797 0.0028045016884717046 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 24166 6547 EYQELM[Oxidation]SVK True NCI_RA007_Epitope_Rep2 1141.5325261188498 1141.5314299358602 30.079 2 0.15326539316386256 0.0007045974986788797 0.0028046136883209203 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'KRT4|p.R420H|1|0.19|ENSG00000170477|chr12:52807731-52807731|C/T|missense_variant', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 109986 4998 TEIGSIHSA True NCI_RA007_Epitope_Rep5 913.45051036661 913.44940993586 25.928 2 0.15326389070795707 0.0007045974986788797 0.0028047108310708807 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 71257 17458 LYPQFMFHL True NCI_RA007_Epitope_Rep5 1194.5895871220598 1194.58848993586 73.938 2 0.15325566735142204 0.0007045974986788797 0.0028052425796117365 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 88615 7665 QTDTLQNDY True H1975_Epitope_Rep3 1096.4672826295598 1096.46618993586 34.465 2 0.15325120728280722 0.0007045974986788797 0.0028055310239448964 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 92328 11139 RLMNDMTAV True PC9_epitope_Rep6 1049.49978614149 1049.49868993586 53.793 2 0.1532487916654583 0.0007045974986788797 0.002805687260594644 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 106168 12596 STDPLDAGVDY True H1975_Epitope_Rep1 1151.4982484046698 1151.49767496793 53.5 1 0.15324862600017747 0.0007045974986788797 0.0028056979757669228 ['ENSG00000139645|ENST00000267116|ANKRD52'] 32786 15458 GHFEKPLFL True PC9_epitope_Rep2 1086.58621599378 1086.5851099358601 64.737 2 0.1532447564732723 0.0007045974986788797 0.00280594826701365 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6', 'PNPLA7|p.A228Lfs*27|1|0.31|ENSG00000130653|chr9:137522845-137522849|GTGCA/-|frameshift_variant', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 61298 11526 LIQDRVAEV True PC9_epitope_Rep5 1041.5818588893299 1041.5807699358602 49.332 2 0.15324380764894976 0.0007045974986788797 0.002806009642880808 ['ENSG00000196878|ENST00000356082|LAMB3'] 90011 9065 RDQIVTVSV True H1975_Epitope_Rep2 1015.56620882519 1015.56510993586 39.822 2 0.15324152506669703 0.0007045974986788797 0.00280615730000022 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 76391 6622 NQDDLTHKL True PC9_epitope_Rep5 1082.5356369729002 1082.53452993586 30.445 2 0.15323565425482755 0.0007045974986788797 0.0028065371103551656 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 84867 5600 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 26.542 2 0.15322278843412757 0.0007045974986788797 0.002807369639833739 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 76399 12843 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52897496793 54.701 1 0.15321084094050236 0.0007045974986788797 0.0028081429660598007 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 140868 13153 YSDVMLENY True H1975_Epitope_Rep1 1132.47467650912 1132.47356993586 55.686 2 0.1532062352617164 0.0007045974986788797 0.00280844113483932 ['ENSG00000130818|ENST00000253115|ZNF426', 'ENSG00000198028|ENST00000301480|ZNF560'] 40493 13574 HRDSGILGL True PC9_epitope_Rep1 966.5246783663799 966.52358993586 57.068 2 0.1532026632466134 0.0007045974986788797 0.0028086724066021607 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 10055 13760 AYSRVQYQF True PC9_epitope_Rep3 1160.5614577979202 1160.56036993586 58.011 2 0.15319068411562548 0.0007045974986788797 0.002809448139538334 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 98384 5706 SEYWDRETRSA True H1975_Epitope_Rep2 1398.61640647474 1398.61530993586 26.944 2 0.15318863915980216 0.0007045974986788797 0.0028095805861398206 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 106109 12074 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 51.455 2 0.1531877141527452 0.0007045974986788797 0.002809640498544761 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 83289 13216 PTDEITVYY True H1975_Epitope_Rep2 1099.50735653639 1099.50677496793 55.963 1 0.15318681039940316 0.0007045974986788797 0.0028096990355833806 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000474340.1_1_9:95003027-95004705:-|nuORF'] 15073 19603 DYSPYFKTI True PC9_epitope_Rep1 1132.5440763982801 1132.5429699358601 80.23 2 0.15318341796466195 0.0007045974986788797 0.002809918777935628 ['ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__Q6IFX2'] 121837 10596 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 48.728 2 0.1531753031641027 0.0007045974986788797 0.0028104444773976276 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 3987 14042 AHDVDPIEL True PC9_epitope_Rep4 1007.4923751785899 1007.49126993586 61.923 2 0.15317353150196258 0.0007045974986788797 0.0028105592636597254 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 2760 11252 AETLSSWEA True H1975_Epitope_Rep1 992.445090633 992.44454496793 48.257 1 0.15317051060239786 0.0007045974986788797 0.0028107549989832073 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant', 'LTN1|p.L617Ffs*33|1|0.19|ENSG00000198862|chr21:28966643-28966643|A/-|frameshift_variant'] 63399 19597 LLVKELQSL True PC9_epitope_Rep5 1041.64339651673 1041.6422899358602 80.432 2 0.15316948077502124 0.0007045974986788797 0.0028108217284362 ['nc|ENSG00000141524|Q7Z403-2|TMC6', 'ENSG00000141524|ENST00000590602|TMC6', 'ENST00000586271.1_1_17:76120592-76121921:-|nuORF', 'ENST00000589553.5_1_17:76120816-76124832:-|nuORF', 'ENST00000588087.5_1_17:76116732-76122925:-|nuORF'] 29883 20472 FVVDEVHLI True PC9_epitope_Rep2 1069.5807962601698 1069.5796899358602 84.175 2 0.1531657963960928 0.0007045974986788797 0.0028110604770963466 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 86011 14548 QHNDLEFKL True PC9_epitope_Rep1 1142.57202248162 1142.57038490379 60.784 3 0.1531652971416475 0.0007045974986788797 0.0028110928304620904 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 115086 14281 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61278993586 62.833 2 0.15315658266803314 0.0007045974986788797 0.0028116576174178646 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 73869 9508 NASEHIVYL True H1975_Epitope_Rep3 1044.5240096600398 1044.52290993586 41.577 2 0.15314802333529515 0.0007045974986788797 0.0028122124597565654 ['ENSG00000117000|ENST00000372771|RLF'] 1890 10019 AEIETELQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48584993586 43.474 2 0.15313980767892882 0.0007045974986788797 0.0028127451265779644 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 104811 7610 SRAAEKLYL True PC9_epitope_Rep2 1049.58694426977 1049.58584993586 34.645 2 0.15313396508224916 0.0007045974986788797 0.002813123995889983 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 7862 7011 ATADLALGR True NCI_RA007_Epitope_Rep2 886.4872302284999 886.48612993586 31.894 2 0.15313185717770875 0.0007045974986788797 0.00281326069765708 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 7317 9855 ARNTVTQVL True PC9_epitope_Rep5 1000.5665431783599 1000.56544993586 42.876 2 0.15313100583304876 0.0007045974986788797 0.0028133159109145272 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 121827 16653 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.50677496793 69.061 1 0.15312955805232484 0.0007045974986788797 0.0028134098080222505 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 104117 4843 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 23.724 2 0.15312895665854123 0.0007045974986788797 0.0028134488128696957 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 108805 5345 SYTSGPGSRI True NCI_RA007_Epitope_Rep5 1023.49852318819 1023.4974299358599 27.251 2 0.1531286727684307 0.0007045974986788797 0.0028134672254362613 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 141342 9369 YTDTYTEAY True H1975_Epitope_Rep2 1125.4502355830898 1125.4491299358601 40.999 2 0.15312855505370201 0.0007045974986788797 0.002813474860222386 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 134005 9197 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 40.718 3 0.1531260208048115 0.0007045974986788797 0.0028136392324974923 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 105319 9137 SRPENAIIY True PC9_epitope_Rep6 1061.5505587610498 1061.54946993586 45.251 2 0.15312314662252166 0.0007045974986788797 0.0028138256645559366 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 22339 9095 ETDPQTISAY True H1975_Epitope_Rep1 1123.50333378511 1123.5022299358602 39.889 2 0.15312239312376028 0.0007045974986788797 0.002813874541824514 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 105072 9094 SRDQSTPII True PC9_epitope_Rep5 1015.5298233164699 1015.52872993586 39.926 2 0.1531200839838334 0.0007045974986788797 0.002814024334271877 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 106062 7003 STAGLIIGK True NCI_RA007_Epitope_Rep3 858.51746772762 858.51636993586 34.655 2 0.15311638475034833 0.0007045974986788797 0.0028142643177742257 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA2|p.Q205Rfs*191|1|0.14|ENSG00000104967|chr19:45940729-45940729|G/-|frameshift_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 140163 16069 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51748993586 66.625 2 0.15310585498840487 0.0007045974986788797 0.0028149475356017 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 47834 19501 IYGYVAEQF True PC9_epitope_Rep4 1088.5178616504397 1088.51727496793 83.129 1 0.15309801181722044 0.0007045974986788797 0.0028154565428873696 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 138274 15894 YHAGVSELL True PC9_epitope_Rep1 987.50254593947 987.50144993586 65.946 2 0.1530961355256249 0.0007045974986788797 0.0028155783243344903 ['ENST00000498789.1_1_21:38634223-38639601:-|nuORF'] 76450 15959 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 66.532 2 0.15308212296272686 0.0007045974986788797 0.002816487981296474 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 116757 17350 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54427496793 72.031 1 0.15307902127050824 0.0007045974986788797 0.0028166893741978782 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 48001 22116 IYLDLPQNF True PC9_epitope_Rep2 1121.57571087973 1121.57460993586 90.546 2 0.15307760765750275 0.0007045974986788797 0.002816781164863288 ['RNF14|p.L342Vfs*10|1|0.21|ENSG00000013561|chr5:141980309-141980310|-/G|frameshift_variant', 'ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 85338 5792 QESTVIRAP True NCI_RA007_Epitope_Rep3 999.5349086969098 999.53380993586 29.76 2 0.15307651184461527 0.0007045974986788797 0.00281685232174533 ['ENSG00000128849|ENST00000281282|CGNL1'] 41520 21197 HYPDFLVQI True PC9_epitope_Rep3 1130.5760452328998 1130.57494993586 86.825 2 0.15307497923583857 0.0007045974986788797 0.002816951845082065 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 130924 10751 VTDFPGFDER True H1975_Epitope_Rep3 1181.5353026197297 1181.5342099358602 46.432 2 0.1530720720390823 0.0007045974986788797 0.002817140639955242 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 38770 6729 HGTAQLQAL True NCI_RA007_Epitope_Rep4 937.4981292653698 937.49702993586 32.506 2 0.1530676010601263 0.0007045974986788797 0.0028174310122712053 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'ENST00000481797.5_1_1:153721154-153726193:+|nuORF'] 45679 15334 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6749899358601 64.262 2 0.15306303209277738 0.0007045974986788797 0.0028177277793620774 ['ENSG00000136628|ENST00000366923|EPRS1'] 42042 15238 IDIIPNPQER True PC9_epitope_Rep1 1193.64043639461 1193.6393299358601 63.432 2 0.1530575603913956 0.0007045974986788797 0.002818083222527397 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 63217 21222 LLSEDFVSV True PC9_epitope_Rep3 1007.5175272972699 1007.51642993586 86.919 2 0.15305742456396385 0.0007045974986788797 0.002818092046481608 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF'] 50006 10084 KIYEGQVEV True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 46.46 2 0.1530514270941211 0.0007045974986788797 0.0028184816962570232 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 98798 19140 SGLLKVWQV True PC9_epitope_Rep4 1028.6018660579198 1028.6007699358602 81.717 2 0.1530369304632423 0.0007045974986788797 0.0028194237500199053 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 114988 19981 TRADLIFTV True PC9_epitope_Rep1 1034.5760452328998 1034.57494993586 81.682 2 0.15303475358286073 0.0007045974986788797 0.002819565240219182 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 39103 8345 HHVLQNDVL True PC9_epitope_Rep4 1073.56179215109 1073.5606899358602 39.557 2 0.15302864728227017 0.0007045974986788797 0.0028199621678193015 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 47122 13725 ITVEKIIKI True PC9_epitope_Rep6 1055.69543208959 1055.6943299358602 64.58 2 0.15302784370902647 0.0007045974986788797 0.0028200144066035356 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 115441 14807 TRMPDGPVAL True PC9_epitope_Rep3 1055.54336520563 1055.54226993586 62.089 2 0.15302128551119498 0.0007045974986788797 0.0028204407787597004 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 90821 9185 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 40.283 2 0.15301475369965734 0.0007045974986788797 0.0028208654993107474 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 38995 9169 HHMGGMAGL True PC9_epitope_Rep3 909.3949271501299 909.39382993586 40.209 2 0.15301427173439455 0.0007045974986788797 0.0028208968408527857 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 106280 6884 STFDTQITK True NCI_RA007_Epitope_Rep2 1039.51858992643 1039.51748993586 31.394 2 0.15300246685805038 0.0007045974986788797 0.0028216646041844392 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 129038 19048 VQNDTLLQV True PC9_epitope_Rep1 1028.5502244078798 1028.54912993586 78.059 2 0.15299362356629662 0.0007045974986788797 0.0028222398889754664 ['ENSG00000184897|ENST00000333762|H1-10'] 108672 19247 SYQKVIELF True PC9_epitope_Rep4 1125.6070110080097 1125.60647496793 82.136 1 0.15299266490372482 0.0007045974986788797 0.0028223022601055942 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 73361 14540 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 61.085 2 0.15298718044048767 0.0007045974986788797 0.002822659108803635 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 85902 17719 QHFNGLLEI True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 80.79 2 0.1529848385967035 0.0007045974986788797 0.0028228114954649657 ['nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 6838 17509 AQFHPTEDLVV True PC9_epitope_Rep1 1254.6244519773002 1254.62334993586 72.142 2 0.15298325886258668 0.0007045974986788797 0.002822914295341985 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 141514 8127 YTLDVTTGQR True NCI_RA007_Epitope_Rep2 1152.57750178488 1152.57640993586 36.246 2 0.1529811077703999 0.0007045974986788797 0.0028230542818672827 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'HNRNPR|p.G135V|1|0.26|ENSG00000125944|chr1:23333612-23333612|C/A|missense_variant', 'ENST00000434910.1_1_20:6194638-6195010:+|nuORF', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 49284 9646 KEQPWVSVQP True H1975_Epitope_Rep2 1196.61897267404 1196.6178699358602 42.081 2 0.15297201964708868 0.0007045974986788797 0.0028236457856083965 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 107720 10236 SVSDLFNTK True NCI_RA007_Epitope_Rep2 1009.50802524273 1009.50692993586 44.407 2 0.1529623858992012 0.0007045974986788797 0.002824272936386874 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 107552 11255 SVPEFPLSPPK True NCI_RA007_Epitope_Rep3 1196.6441247927198 1196.64302993586 51.386 2 0.1529622926711078 0.0007045974986788797 0.0028242790061538538 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 52503 7356 KKYKNIVLL True NCI_RA007_Epitope_Rep4 1117.7223155437698 1117.72120993586 34.935 2 0.15296174792079023 0.0007045974986788797 0.0028243144732711467 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16'] 17873 19143 EHVPVVIGL True PC9_epitope_Rep1 961.5596668927699 961.55856993586 78.427 2 0.15295932696857217 0.0007045974986788797 0.00282447209983669 ['ENSG00000170677|ENST00000397942|SOCS6'] 15045 23709 DYNFVFTSF True PC9_epitope_Rep2 1138.49712620586 1138.4960299358602 96.666 2 0.15295509793011733 0.0007045974986788797 0.0028247474707128054 ['ENSG00000123505|ENST00000368885|AMD1', 'nc|ENSG00000123505|P17707-2|AMD1'] 48068 22310 IYMDTLNIF True PC9_epitope_Rep4 1128.5525329069999 1128.5514299358601 94.055 2 0.15294901871267913 0.0007045974986788797 0.0028251433615748773 ['ENSG00000165678|ENST00000372134|GHITM'] 88026 13783 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 58.035 2 0.15294502243146404 0.0007045974986788797 0.0028254036375655917 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 85339 6249 QESTVIRAP True NCI_RA007_Epitope_Rep4 999.5349086969098 999.53380993586 30.642 2 0.15294410576067902 0.0007045974986788797 0.002825463343289381 ['ENSG00000128849|ENST00000281282|CGNL1'] 21390 12391 ERIGETPEL True PC9_epitope_Rep5 1042.5294889632999 1042.52838993586 52.659 2 0.15294271182733285 0.0007045974986788797 0.0028255541370725144 ['ENSG00000168806|ENST00000305641|LCMT2'] 47889 12616 IYIGGQEHF True PC9_epitope_Rep6 1062.5134449763398 1062.5123499358601 59.985 2 0.15294087022044783 0.0007045974986788797 0.002825674094509159 ['ENSG00000158125|ENST00000379416|XDH'] 76742 20444 NQVGIVLNV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 83.675 2 0.15292698758416662 0.0007045974986788797 0.0028265785363432183 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'ENST00000467287.5_1_1:151401965-151414680:-|nuORF', 'nc|ENSG00000143442|Q7Z3K3-4|POGZ'] 87499 20986 QQFQEPFVAV True PC9_epitope_Rep1 1191.59242357303 1191.5913299358601 85.548 2 0.1529215549121241 0.0007045974986788797 0.0028269325488022596 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67958045-67971691:-|nuORF'] 24215 5535 EYSKQMQRF True NCI_RA007_Epitope_Rep1 1215.57064258263 1215.56899490379 25.6 3 0.15291599360501254 0.0007045974986788797 0.002827294989356111 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 141846 5381 YVDGVEVHN True NCI_RA007_Epitope_Rep5 1030.47197408718 1030.47086993586 27.386 2 0.15291495408359201 0.0007045974986788797 0.002827362742005176 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 17538 19277 EHGNFLITV True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 78.951 2 0.15291157421262197 0.0007045974986788797 0.002827583042263593 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 95824 13905 RYIPTAAAF True PC9_epitope_Rep4 1008.5392658013599 1008.53816993586 61.389 2 0.15290806892015707 0.0007045974986788797 0.002827811535576485 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 92157 10544 RLELTELEA True H1975_Epitope_Rep3 1072.57643915572 1072.57534993586 45.624 2 0.15290271193775362 0.0007045974986788797 0.0028281607672847914 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'ENST00000418039.2_1_15:78290504-78290759:-|nuORF', 'ENST00000491479.1_1_15:78290504-78294097:-|nuORF'] 97247 9849 SEADIRGFVAA True NCI_RA007_Epitope_Rep3 1134.56693710118 1134.5658499358601 45.813 2 0.15290034071932707 0.0007045974986788797 0.0028283153651757075 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 118437 18340 TYPENWRAF True PC9_epitope_Rep3 1182.5458077337798 1182.54470993586 75.756 2 0.15289829802783095 0.0007045974986788797 0.0028284485506326674 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 70549 18494 LVYQEPIPTA True PC9_epitope_Rep5 1129.60192562757 1129.60082993586 76.16 2 0.1528981369357296 0.0007045974986788797 0.0028284590542590506 ['ENSG00000106588|ENST00000223321|PSMA2', 'ENST00000433579.1_1_7:42952135-42964395:-|nuORF', 'ENST00000411875.1_1_7:42961455-42966220:-|nuORF'] 32030 12875 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 54.595 2 0.15289799606117654 0.0007045974986788797 0.002828468239680263 ['ENSG00000051523|ENST00000261623|CYBA'] 138130 20422 YGIPAIVKL True PC9_epitope_Rep1 972.60080342876 972.59970993586 83.367 2 0.15289091351424441 0.0007045974986788797 0.0028289300801896894 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 73398 19781 MTISEFDRL True PC9_epitope_Rep5 1110.53794547202 1110.5368499358601 81.133 2 0.15289019196248865 0.0007045974986788797 0.0028289771355370402 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-4|ABLIM3'] 11788 15270 DHDSSEYLL True PC9_epitope_Rep2 1077.46146897313 1077.4603699358602 64.012 2 0.152884320133074 0.0007045974986788797 0.0028293600906038542 ['ENSG00000075461|ENST00000262138|CACNG4'] 141928 13095 YVFPGVTRL True H1975_Epitope_Rep2 1050.58621599378 1050.5851099358601 55.495 2 0.15288296213257657 0.0007045974986788797 0.0028294486654460434 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 8012 15255 ATDLDVANFY True H1975_Epitope_Rep1 1127.51350454599 1127.51297496793 63.943 1 0.1528826682831677 0.0007045974986788797 0.002829467831977244 ['ENSG00000142252|ENST00000270257|GEMIN7'] 105184 15050 SRGDFVVEY True PC9_epitope_Rep5 1070.50327421546 1070.5021699358601 62.896 2 0.15288253856785605 0.0007045974986788797 0.0028294762927894485 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 70852 18964 LYDPVISKL True PC9_epitope_Rep1 1046.6011973515801 1046.60010993586 77.728 2 0.15287572773796387 0.0007045974986788797 0.0028299205714680947 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 133722 22448 VYDPLFSQL True PC9_epitope_Rep5 1080.54916177872 1080.5480699358602 91.347 2 0.15287186164803535 0.0007045974986788797 0.0028301727921266674 ['ENSG00000100104|ENST00000215917|SRRD'] 8100 6207 ATDYHVRVY True H1975_Epitope_Rep3 1122.5458077337798 1122.54415490379 28.888 3 0.1528677004640836 0.0007045974986788797 0.002830444289520649 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 71748 12295 MEENPGIFA True H1975_Epitope_Rep2 1006.4429824580199 1006.44188993586 52.376 2 0.15286504360230901 0.0007045974986788797 0.0028306176506489723 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 106279 6988 STFDTQITK True NCI_RA007_Epitope_Rep1 1039.51858992643 1039.51748993586 31.18 2 0.15286289626738497 0.0007045974986788797 0.0028307577727108625 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 134750 17035 VYTSKSDVWSF True PC9_epitope_Rep6 1317.62411762413 1317.6230299358601 78.081 2 0.15286060427223125 0.0007045974986788797 0.0028309073420497155 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 114560 20110 TQDAVPLTL True PC9_epitope_Rep1 956.51786165044 956.51731496793 82.183 1 0.15285001741464332 0.0007045974986788797 0.002831598313655809 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 77482 16353 NTATIFHEL True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 68.146 2 0.15284612615006266 0.0007045974986788797 0.0028318523267583827 ['ENSG00000183735|ENST00000331710|TBK1'] 21659 16494 ERSDTFINL True PC9_epitope_Rep4 1093.54038800017 1093.53928993586 71.413 2 0.1528459094339047 0.0007045974986788797 0.002831866474175053 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 104891 16890 SRDAFGYATL True PC9_epitope_Rep5 1099.52982331647 1099.5287299358602 69.979 2 0.15284555083637522 0.0007045974986788797 0.0028318898838840577 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 66038 9694 LSEGFSIHTR True PC9_epitope_Rep5 1145.5829215184901 1145.58127490379 42.255 3 0.15284383400473472 0.0007045974986788797 0.002832001963538812 ['ENSG00000008018|ENST00000262193|PSMB1'] 35032 19623 GQVEDVVGNL True PC9_epitope_Rep5 1028.5138388991597 1028.51274993586 80.532 2 0.15283350534287204 0.0007045974986788797 0.002832676341282984 ['ENSG00000196878|ENST00000356082|LAMB3'] 9627 19253 AYANIISQF True PC9_epitope_Rep6 1025.5181960036098 1025.5170899358602 86.706 2 0.1528326881407449 0.0007045974986788797 0.0028327297047774395 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 90358 13859 REGDLLFTVA True NCI_RA007_Epitope_Rep1 1119.5924235730301 1119.5913299358601 57.927 2 0.15283141158543193 0.0007045974986788797 0.0028328130661497693 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 88039 14837 QRQDIAFAY True PC9_epitope_Rep3 1110.5458077337798 1110.54470993586 62.207 2 0.15283096542916486 0.0007045974986788797 0.002832842201538042 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 97700 7489 SEIDMSVKA True H1975_Epitope_Rep2 978.46919720586 978.46808993586 33.756 2 0.15282908179418908 0.0007045974986788797 0.002832965212037271 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 17598 12610 EHINEGETAML True PC9_epitope_Rep1 1242.55505208814 1242.5539499358601 53.372 2 0.15282873234431005 0.0007045974986788797 0.0028329880333945396 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 54451 15022 KYGALVNNF True PC9_epitope_Rep5 1024.53418042092 1024.53308993586 62.786 2 0.1528213700648682 0.0007045974986788797 0.002833468880875755 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 139997 20976 YQDPVTLQL True PC9_epitope_Rep1 1075.55497543515 1075.5538699358601 85.509 2 0.1528187704246227 0.0007045974986788797 0.0028336386888171304 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 106566 5554 STMSTNGIPR True NCI_RA007_Epitope_Rep4 1062.51279335334 1062.5116899358602 27.96 2 0.1528161967806665 0.0007045974986788797 0.002833806808676818 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 3284 4843 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 26.137 2 0.15280761642303214 0.0007045974986788797 0.002834367380918243 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 1207 6267 AEDAVEAIR True NCI_RA007_Epitope_Rep2 972.4876241513199 972.48652993586 28.983 2 0.15279732420734782 0.0007045974986788797 0.0028350399381205462 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'RBM4-DPP3|1|fusion', 'ENSG00000173914|ENST00000310046|RBM4B'] 75032 19647 NHSFMPIVL True PC9_epitope_Rep4 1056.54263692964 1056.5415299358601 83.69 2 0.1527825321614529 0.0007045974986788797 0.0028360068206965384 ['ENSG00000198712|ENST00000361739|MT-CO2'] 76148 13014 NM[Oxidation]VDIIHSV True PC9_epitope_Rep4 1042.5117311046201 1042.5106299358602 57.952 2 0.15277962226018346 0.0007045974986788797 0.002836197065170176 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 141934 19783 YVFPGVTRL True PC9_epitope_Rep3 1050.58621599378 1050.5851099358601 81.326 2 0.15277863806317207 0.0007045974986788797 0.002836261413201451 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 116549 20577 TTVDHFWGL True PC9_epitope_Rep5 1074.51344497634 1074.5123499358601 84.196 2 0.15277725213768845 0.0007045974986788797 0.0028363520292095813 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'SUN1|p.D153Y|1|0.2|ENSG00000164828|chr7:843211-843211|G/T|missense_variant', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.E401Kfs*45|1|0.12|ENSG00000164828|chr7:853555-853555|G/-|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 115008 9092 TRAGPGTLSV True PC9_epitope_Rep5 957.52434401321 957.52324993586 39.918 2 0.15277461611641066 0.0007045974986788797 0.0028365243882318577 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 84905 6099 QEDAQRLYQA True H1975_Epitope_Rep3 1220.57856441404 1220.57746993586 28.472 2 0.15277187255660815 0.0007045974986788797 0.0028367037898592985 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 17465 12236 EHFDASHVAL True PC9_epitope_Rep5 1124.5250722892 1124.52343490379 52.051 3 0.15276798374303013 0.0007045974986788797 0.002836958099110134 ['ENSG00000164062|ENST00000296456|APEH'] 103267 11841 SPLLLQAKA True PC9_epitope_Rep2 939.5753169569099 939.57420993586 50.875 2 0.15276783744377329 0.0007045974986788797 0.002836967666804283 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 100172 10901 SITSVFITK True NCI_RA007_Epitope_Rep4 994.5698972233 994.56880993586 48.79 2 0.15276671932403663 0.0007045974986788797 0.002837040790778196 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 17799 16234 EHSLVIDTL True PC9_epitope_Rep4 1025.53932537101 1025.5387749679298 70.386 1 0.15275881534691352 0.0007045974986788797 0.0028375577569848187 ['ENSG00000143256|ENST00000368010|PFDN2'] 114934 11133 TQTAVITRI True PC9_epitope_Rep5 1001.5869442697699 1001.58584993586 47.808 2 0.1527578205356301 0.0007045974986788797 0.002837622830096621 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 111064 15849 THDITTISI True PC9_epitope_Rep3 999.52367530687 999.52256993586 66.115 2 0.1527572241775714 0.0007045974986788797 0.0028376618400923676 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 77908 7543 NVIGEPIDER True H1975_Epitope_Rep3 1140.5775017848798 1140.57640993586 33.997 2 0.15275509507435234 0.0007045974986788797 0.0028378011170025774 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000548647.1_1_12:57037677-57039699:-|nuORF'] 39068 9895 HHSNLIAGM True PC9_epitope_Rep5 978.47053461854 978.46942993586 43.031 2 0.15275481857469445 0.0007045974986788797 0.002837819204938299 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 128408 8438 VPRPPDTVST True PC9_epitope_Rep3 1067.56112344475 1067.56002993586 37.42 2 0.15274029565940872 0.0007045974986788797 0.0028387694202897315 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 115455 10337 TRMSTVSEL True PC9_epitope_Rep1 1022.5066453437399 1022.5055499358599 44.643 2 0.1527354336549596 0.0007045974986788797 0.0028390876057222112 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 138378 14730 YHGEVPVSL True PC9_epitope_Rep3 999.5025459394699 999.50144993586 61.796 2 0.1527305800621395 0.0007045974986788797 0.002839405276120237 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 125165 10885 VIHDNFGIVEG True NCI_RA007_Epitope_Rep1 1198.59823722946 1198.5971499358602 46.332 2 0.1527276748866915 0.0007045974986788797 0.0028395954384450037 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 118285 15475 TYLPTSPLL True NCI_RA007_Epitope_Rep3 1003.55899818643 1003.55847496793 68.427 1 0.1527196837142382 0.0007045974986788797 0.0028401185772954276 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 134252 11986 VYNENLVHMI True NCI_RA007_Epitope_Rep3 1230.60669373818 1230.60558993586 54.265 2 0.15270938457996125 0.0007045974986788797 0.0028407929475932027 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 11761 15058 DHDGNIVEL True PC9_epitope_Rep5 1010.46688870674 1010.46578993586 62.927 2 0.15270661081539305 0.0007045974986788797 0.0028409745963891525 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 74000 9597 NDEELNKLLGK True NCI_RA007_Epitope_Rep5 1271.6721304457099 1271.67049490379 43.557 3 0.1527013775470307 0.0007045974986788797 0.002841317345136969 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 22361 13993 ETEDVFYTY True H1975_Epitope_Rep2 1165.4815357113698 1165.48042993586 58.973 2 0.1526965404110205 0.0007045974986788797 0.0028416341861596047 ['nc|ENSG00000070159|P26045-3|PTPN3', 'nc|ENSG00000070159|P26045-2|PTPN3', 'ENSG00000070159|ENST00000374541|PTPN3'] 34697 7280 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.39 2 0.1526932675179508 0.0007045974986788797 0.0028418485864556767 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 74234 7274 NEIDAEPPA True H1975_Epitope_Rep3 954.42944056886 954.4288949679301 32.954 1 0.15269313644808116 0.0007045974986788797 0.0028418571729010716 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 34565 4342 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 23.31 2 0.15269300533560334 0.0007045974986788797 0.0028418657621636124 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 77502 14054 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41816993586 59.211 2 0.15267806395593256 0.0007045974986788797 0.002842844751013989 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 97742 11195 SEILYSAPP True H1975_Epitope_Rep2 975.49131254943 975.4907649679301 48.1 1 0.1526775647707179 0.0007045974986788797 0.0028428774644212677 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 111112 8607 THEEAVTAL True PC9_epitope_Rep1 969.4767251144499 969.47562993586 37.943 2 0.15267592125567014 0.0007045974986788797 0.002842985172540065 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 90069 5056 REAEFTKSIA True H1975_Epitope_Rep2 1150.59823722946 1150.5971499358602 24.53 2 0.1526688553867343 0.0007045974986788797 0.0028434482821364866 ['ENSG00000118363|ENST00000263672|SPCS2'] 11939 15228 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.54754490379 70.672 3 0.15266861010163518 0.0007045974986788797 0.0028434643599075304 ['ENSG00000273749|ENST00000617928|CYFIP1'] 56861 19634 LDPHLVLDQLR True PC9_epitope_Rep3 1317.7404847890498 1317.73882490379 80.759 3 0.15266680397158527 0.0007045974986788797 0.0028435827496090704 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 139987 5087 YQDPHSTAV True PC9_epitope_Rep5 1016.45632402304 1016.45522993586 24.593 2 0.15266640738008325 0.0007045974986788797 0.0028436087463735472 ['ENSG00000146648|ENST00000275493|EGFR'] 31450 9135 GEALPHVVP True H1975_Epitope_Rep3 917.49706663621 917.49596993586 40.127 2 0.1526645008625061 0.0007045974986788797 0.002843733722827547 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 65268 12630 LQVEEVHQL True PC9_epitope_Rep2 1093.57677350889 1093.57566993586 53.89 2 0.15266223089217168 0.0007045974986788797 0.0028438825315541412 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 92830 7648 RPASYQSVSV True PC9_epitope_Rep2 1092.55637241748 1092.55526993586 34.788 2 0.1526554655569771 0.0007045974986788797 0.0028443260815813913 ['ENSG00000167720|ENST00000344595|SRR'] 115721 8423 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 39.078 2 0.15265402992614885 0.0007045974986788797 0.0028444202135142925 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 85019 6734 QEHENIIVA True H1975_Epitope_Rep2 1051.52982331647 1051.5287299358602 30.817 2 0.15265285926773547 0.0007045974986788797 0.0028444969739432257 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 7997 6942 ATDINGDDY True H1975_Epitope_Rep2 982.3879696796998 982.38686993586 31.622 2 0.15265196714408003 0.0007045974986788797 0.0028445554721492202 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 39126 14892 HHYEGAVVIL True PC9_epitope_Rep5 1136.5978433066398 1136.59674993586 62.285 2 0.15264905821992925 0.0007045974986788797 0.002844746224039739 ['ENSG00000163655|ENST00000496455|GMPS'] 105589 9469 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.45377496793 41.391 1 0.15264838850839454 0.0007045974986788797 0.002844790141992203 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 6876 19172 AQIDHYLGL True PC9_epitope_Rep3 1028.52909504048 1028.5279899358602 78.964 2 0.15264570588604554 0.0007045974986788797 0.002844966068210235 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 19397 10566 ELLTTMGDR True PC9_epitope_Rep4 1034.5066453437398 1034.50554993586 48.38 2 0.1526351523536552 0.0007045974986788797 0.002845658273484336 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 22353 10821 ETDSFKLAY True H1975_Epitope_Rep2 1072.5076908895599 1072.5065899358601 46.652 2 0.15263501584792033 0.0007045974986788797 0.0028456672279830635 ['nc|ENSG00000275066|Q9UMZ2-6|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-9|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-4|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-8|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-3|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-7|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-5|SYNRG', 'ENSG00000275066|ENST00000612223|SYNRG'] 2902 12812 AEWLGVLKA True NCI_RA007_Epitope_Rep3 985.5596668927699 985.55856993586 57.638 2 0.15263432491336693 0.0007045974986788797 0.0028457125523160473 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 48880 3369 KEAPPMEKP True NCI_RA007_Epitope_Rep4 1025.52156713189 1025.52046993586 18.781 2 0.15263093269426287 0.0007045974986788797 0.0028459350875453837 ['ENSG00000115268|ENST00000592588|RPS15'] 29037 9072 FTEQYNEQY True H1975_Epitope_Rep2 1220.4985827578398 1220.4974899358601 39.849 2 0.15263062441148725 0.0007045974986788797 0.0028459553122691067 ['ENSG00000173914|ENST00000310046|RBM4B'] 57512 12035 LEDLPTVEA True H1975_Epitope_Rep3 985.49679185269 985.49624496793 51.453 1 0.15262889069941285 0.0007045974986788797 0.002846069054174019 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 28944 9426 FTDPRTMGY True H1975_Epitope_Rep1 1086.4804305958999 1086.47932993586 41.17 2 0.1526236363251086 0.0007045974986788797 0.002846413800296612 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 114922 11105 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 47.601 2 0.15262339521591703 0.0007045974986788797 0.0028464296207732337 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 99277 9116 SHQTGVVAL True PC9_epitope_Rep1 910.4872302284999 910.48612993586 39.915 2 0.15261890843621895 0.0007045974986788797 0.0028467240386165723 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 128791 16025 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 73.966 2 0.15261885551840906 0.0007045974986788797 0.0028467275112095893 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 105013 18146 SRDLFTYTV True PC9_epitope_Rep2 1100.55022440788 1100.54912993586 75.101 2 0.1526156985970872 0.0007045974986788797 0.002846934683561693 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 13282 18058 DLTEYLSR True PC9_epitope_Rep3 995.49237517859 995.49126993586 74.659 2 0.15261406422806476 0.0007045974986788797 0.002847041944615929 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 109761 9072 TEDPNQLTV True H1975_Epitope_Rep3 1015.4822044177099 1015.4816749679301 39.881 1 0.1526118095227228 0.0007045974986788797 0.002847189923971915 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 40238 21647 HQILTPFLL True PC9_epitope_Rep3 1080.6331661862 1080.63206993586 88.564 2 0.15260713545184101 0.0007045974986788797 0.0028474967139699102 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 8179 9597 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51227496793 41.891 1 0.152604705775109 0.0007045974986788797 0.0028476562026386112 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 73223 19559 MSDLLSPLLY True H1975_Epitope_Rep3 1150.59439771898 1150.5938749679299 81.952 1 0.1526028715529439 0.0007045974986788797 0.0028477766104174984 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 115254 11288 TREEGTPLTL True PC9_epitope_Rep4 1115.5822528121498 1115.5811499358601 51.197 2 0.15260256819124882 0.0007045974986788797 0.0028477965251287214 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 91588 22259 RILDIDIPLSV True PC9_epitope_Rep1 1252.7390878067201 1252.73798993586 90.436 2 0.15260012783090635 0.0007045974986788797 0.002847956731917852 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 99526 13952 SIDSLQLGY True H1975_Epitope_Rep1 994.49712620586 994.4965749679301 58.822 1 0.15259723670188247 0.0007045974986788797 0.0028481465427645167 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 131022 4701 VTDRDIDRY True H1975_Epitope_Rep3 1151.55710069347 1151.55544490379 23.208 3 0.15259689126606085 0.0007045974986788797 0.0028481692224521953 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 33352 5976 GKSTISTEL True NCI_RA007_Epitope_Rep5 934.49712620586 934.49602993586 29.67 2 0.1525960021227439 0.0007045974986788797 0.002848227600238817 ['ENSG00000095906|ENST00000262302|NUBP2', 'ENST00000566447.5_1_16:1832991-1836957:+|nuORF', 'ENST00000566090.5_1_16:1832991-1836988:+|nuORF', 'ENST00000568706.1_1_16:1834024-1837680:+|nuORF'] 109162 19385 TAM[Oxidation]DVVYAL True PC9_epitope_Rep2 997.4790339940099 997.47792993586 79.942 2 0.15259365424961616 0.0007045974986788797 0.0028483817584381167 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 132762 19571 VVINYTEQL True PC9_epitope_Rep3 1077.57062549929 1077.5695299358601 80.514 2 0.15259334170045968 0.0007045974986788797 0.002848402280623466 ['ENSG00000095015|ENST00000399503|MAP3K1'] 129690 10834 VRPPVQVY True PC9_epitope_Rep2 956.5443511817998 956.54324993586 46.992 2 0.1525874518425848 0.0007045974986788797 0.002848789040158608 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 54948 10778 KYQAVTATL True PC9_epitope_Rep1 993.5494961318899 993.54838993586 46.345 2 0.15258150600107429 0.0007045974986788797 0.0028491795289596563 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 34015 7952 GLTSVINQK True PC9_epitope_Rep6 958.5447451046199 958.54364993586 40.035 2 0.15256964222265448 0.0007045974986788797 0.002849958833347809 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 116225 12464 TTDDPALLY True H1975_Epitope_Rep1 1007.4811417885498 1007.48057496793 52.98 1 0.15256266681233 0.0007045974986788797 0.0028504171312072855 ['ENSG00000182749|ENST00000675840|PAQR7'] 32005 5696 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 26.94 1 0.15256021651454607 0.0007045974986788797 0.002850578137909108 ['ENSG00000108344|ENST00000264639|PSMD3'] 114779 20791 TQLDLEDVQV True PC9_epitope_Rep1 1158.57683307854 1158.5757299358602 84.803 2 0.1525580558660927 0.0007045974986788797 0.0028507201195522996 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 26159 15969 FHDAVQGYASL True PC9_epitope_Rep5 1206.5669371011797 1206.5658499358601 66.414 2 0.15255775100927585 0.0007045974986788797 0.002850740153027654 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF'] 106966 9940 SVEERITQV True PC9_epitope_Rep2 1059.5560380643099 1059.5549499358601 43.564 2 0.1525554761627565 0.0007045974986788797 0.002850889647575671 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'CHD3|p.A1188S|1|0.15|ENSG00000170004|chr17:7903338-7903338|G/T|missense_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 17735 10843 EHQSNGGALVL True PC9_epitope_Rep1 1123.5621860739097 1123.56108993586 46.594 2 0.1525550412874998 0.0007045974986788797 0.002850918226867856 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'RSBN1|p.V415Mfs*25|1|0.09|ENSG00000081019|chr1:113797497-113797498|-/AT|frameshift_variant', 'nc|ENSG00000081019|Q5VWQ0-4|RSBN1'] 35110 8132 GQVTEAVKV True PC9_epitope_Rep1 929.5181960036099 929.51708993586 36.108 2 0.15255449158650936 0.0007045974986788797 0.0028509543527284074 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 141951 20117 YVIDPIKGLKL True PC9_epitope_Rep3 1257.7696596590097 1257.7680149037901 82.631 3 0.15255082818056406 0.0007045974986788797 0.0028511951201620985 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 28284 12292 FRPLYTHEY True PC9_epitope_Rep1 1224.5927579261997 1224.59110490379 52.134 3 0.15254807003380919 0.0007045974986788797 0.002851376405257819 ['ENSG00000008952|ENST00000337002|SEC62'] 31425 10414 GEAEKWAIP True H1975_Epitope_Rep3 999.5025459394698 999.50144993586 45.116 2 0.1525477646090668 0.0007045974986788797 0.0028513964806587693 ['ENSG00000188636|ENST00000341255|RTL6'] 3522 9899 AGLQFPVGR True NCI_RA007_Epitope_Rep5 943.5239500903898 943.52284993586 44.719 2 0.15254730975424452 0.0007045974986788797 0.0028514263782780684 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 27913 20365 FQEEDFPAL True PC9_epitope_Rep4 1094.4920408254197 1094.49094993586 86.479 2 0.15254595969078907 0.0007045974986788797 0.0028515151198237787 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 4413 19059 AIQDKLFQV True PC9_epitope_Rep1 1060.59169529704 1060.5905899358602 78.101 2 0.15254295746992652 0.0007045974986788797 0.0028517124698353544 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 139918 6758 YQAEAREAL True PC9_epitope_Rep2 1049.5141732523298 1049.5130699358601 31.402 2 0.1525427869184867 0.0007045974986788797 0.002851723681387319 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 8448 5300 ATPKFGPYQK True NCI_RA007_Epitope_Rep4 1135.6025943339098 1135.60093490379 26.94 3 0.15254059711887236 0.0007045974986788797 0.00285186763630084 ['ENSG00000150457|ENST00000382592|LATS2'] 107745 4956 SVSNVVITK True NCI_RA007_Epitope_Rep3 945.54949613189 945.5489449679301 26.491 1 0.15253974407171073 0.0007045974986788797 0.002851923716602179 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 28269 11460 FRMTDQEAI True PC9_epitope_Rep6 1109.5175443806097 1109.51644993586 55.143 2 0.1525323534424197 0.0007045974986788797 0.0028524096310775632 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 99195 17735 SHLDYDITL True PC9_epitope_Rep4 1075.5185899264302 1075.51748993586 76.24 2 0.15253006978502964 0.0007045974986788797 0.002852559792240604 ['ENSG00000163960|ENST00000296328|UBXN7'] 38849 4770 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 24.919 2 0.15252691091396453 0.0007045974986788797 0.0028527675157843007 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 75160 8498 NHYQKQLEI True PC9_epitope_Rep5 1171.5985715826298 1171.59691490379 37.629 3 0.1525248532824477 0.0007045974986788797 0.002852902831253364 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 71471 17405 LYVVDLKKF True PC9_epitope_Rep2 1123.6641319613097 1123.66249490379 72.207 3 0.15252176620421198 0.0007045974986788797 0.002853105857947289 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 75184 18994 NIANHFFTV True PC9_epitope_Rep2 1061.52942939365 1061.52832993586 78.427 2 0.15252040572195177 0.0007045974986788797 0.0028531953368346346 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 27978 19968 FQIIQSIRMGM True PC9_epitope_Rep4 1322.6838985130598 1322.6828099358602 84.94 2 0.15251993492477203 0.0007045974986788797 0.0028532263018057453 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 117049 23384 TVIDQIPFL True PC9_epitope_Rep1 1044.58554728744 1044.5844499358602 94.728 2 0.15251472573568536 0.0007045974986788797 0.002853568939612581 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 54210 19432 KVVNIVPVI True PC9_epitope_Rep5 979.6430025939098 979.64190993586 79.795 2 0.15251466367237163 0.0007045974986788797 0.002853573022114647 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 72073 5602 MEVEAPSKPA True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 26.55 2 0.15251446974986577 0.0007045974986788797 0.002853585778303623 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 77141 6450 NRPGTVSSL True PC9_epitope_Rep3 929.49304388493 929.49194993586 29.835 2 0.15251420844898766 0.0007045974986788797 0.0028536029667201716 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 92361 15364 RLPEIYIQL True NCI_RA007_Epitope_Rep4 1143.66519459047 1143.6640899358601 66.767 2 0.15251110756173386 0.0007045974986788797 0.002853806951492361 ['EHD4|p.F425Sfs*51|1|0.18|ENSG00000103966|chr15:41900999-41900999|G/-|frameshift_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 70858 16594 LYDPVISKL True PC9_epitope_Rep6 1046.6011973515801 1046.60010993586 76.282 2 0.1525053123387837 0.0007045974986788797 0.0028541882159276964 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 67416 7248 LSSPATLNSR True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 32.842 2 0.15250408363708598 0.0007045974986788797 0.0028542690580379694 ['CON__P00761'] 76670 11363 NQSEATFRL True PC9_epitope_Rep4 1064.5250722892 1064.5239699358601 51.481 2 0.15250090098526853 0.0007045974986788797 0.0028544784704008655 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 35812 14978 GTITQVIKV True PC9_epitope_Rep5 957.58588164061 957.58478993586 62.617 2 0.1524947485056076 0.0007045974986788797 0.0028548833351261637 ['ENSG00000166747|ENST00000299980|AP1G1', 'nc|ENSG00000166747|O43747-2|AP1G1'] 102672 20520 SLYKSFLQL True PC9_epitope_Rep2 1097.6120963884498 1097.61098993586 84.361 2 0.1524930492059193 0.0007045974986788797 0.0028549951678482214 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 10098 18755 AYTPFHAVL True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 77.153 2 0.15249061413646875 0.0007045974986788797 0.0028551554299718115 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 134446 5557 VYPPIRHHL True NCI_RA007_Epitope_Rep4 1130.6348975217 1130.63326490379 27.975 3 0.15249028671096834 0.0007045974986788797 0.002855176979899661 ['nc|ENSG00000155975|Q8NEZ2-3|VPS37A', 'ENSG00000155975|ENST00000324849|VPS37A', 'nc|ENSG00000155975|Q8NEZ2-2|VPS37A'] 98250 10288 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 44.517 2 0.15247872619653932 0.0007045974986788797 0.002855937953832247 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 98265 10316 SEVFESVSA True H1975_Epitope_Rep2 953.43419159613 953.43364496793 44.688 1 0.15247749502721808 0.0007045974986788797 0.002856019007787049 ['ENSG00000155850|ENST00000286298|SLC26A2'] 6653 19443 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 79.838 2 0.152471425760443 0.0007045974986788797 0.002856418611088575 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 93465 20016 RQIDQFLVV True PC9_epitope_Rep3 1116.62914343492 1116.6280499358602 82.239 2 0.15246761314589485 0.0007045974986788797 0.002856669663867163 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 117380 15166 TVPKPDVVVQV True PC9_epitope_Rep5 1179.68632395787 1179.6852299358602 63.344 2 0.15245930011204467 0.0007045974986788797 0.002857217136185017 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 92810 6833 RPAPPPPTV True PC9_epitope_Rep1 930.5287011176599 930.52760993586 31.09 2 0.15245881181208382 0.0007045974986788797 0.0028572492974561995 ['ENST00000464824.2_1_1:155034702-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-11|ADAM15', 'nc|ENSG00000143537|Q13444-2|ADAM15', 'nc|ENSG00000143537|Q13444-12|ADAM15', 'nc|ENSG00000143537|Q13444-5|ADAM15', 'nc|ENSG00000143537|Q13444-4|ADAM15', 'ENST00000527418.5_1_1:155025082-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-3|ADAM15', 'ENSG00000143537|ENST00000356955|ADAM15'] 104932 10069 SRDDTTLNAL True PC9_epitope_Rep4 1104.54111627616 1104.54000993586 46.397 2 0.1524562832776205 0.0007045974986788797 0.002857415842012564 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 77334 11260 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.4967499358602 48.288 2 0.1524530176179388 0.0007045974986788797 0.002857630952404123 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 111393 10006 THSFGNPSI True PC9_epitope_Rep5 958.45084471978 958.44974993586 43.465 2 0.1524524591087807 0.0007045974986788797 0.002857667743255693 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.Q39Afs*14|1|0.2|ENSG00000145012|chr3:188406232-188406236|ACACA/-|frameshift_variant'] 92279 14830 RLLDEEISRV True PC9_epitope_Rep5 1228.67755017932 1228.67590490379 62.044 3 0.1524521016595959 0.0007045974986788797 0.0028576912898673422 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 31765 10466 GEHTLLVTV True NCI_RA007_Epitope_Rep4 967.5338460677499 967.53274993586 47.106 2 0.15245076112391442 0.0007045974986788797 0.0028577795980521937 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 24821 13412 FAVATPEEL True NCI_RA007_Epitope_Rep4 975.4913125494298 975.4907649679301 58.768 1 0.1524466030004913 0.0007045974986788797 0.002858053532963259 ['AMFR|p.M380Vfs*3|1|0.07|ENSG00000159461|chr16:56389322-56389323|AT/-|frameshift_variant', 'ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 45249 17826 IPTPIVGV True PC9_epitope_Rep6 794.49019035062 794.4896449679301 81.199 1 0.15243536581475126 0.0007045974986788797 0.002858793963565429 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 29322 16737 FVDEPLIHA True PC9_epitope_Rep5 1039.5338460677497 1039.53274993586 69.386 2 0.15243171690262733 0.0007045974986788797 0.0028590344355324347 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 9706 18601 AYGHFSYEF True PC9_epitope_Rep5 1119.46616043075 1119.4650699358601 76.573 2 0.15243084140180974 0.0007045974986788797 0.002859092136111947 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 105179 15140 SRGDFVVEY True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 63.374 2 0.1524255072888122 0.0007045974986788797 0.002859443710155743 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 7970 13020 ATDDITELY True H1975_Epitope_Rep3 1039.47097102767 1039.46986993586 55.318 2 0.1524242815099079 0.0007045974986788797 0.0028595245079409016 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 41219 16384 HVLDVIHEV True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 68.16 2 0.15242366956960077 0.0007045974986788797 0.0028595648451215116 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 142236 17953 YWMHVQNTF True PC9_epitope_Rep4 1224.53861417836 1224.53750993586 77.109 2 0.15242277076979727 0.0007045974986788797 0.0028596240922060118 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 47316 5538 IVEFASKPAAR True NCI_RA007_Epitope_Rep1 1187.6662572196299 1187.6646149037902 25.612 3 0.15242158844035153 0.0007045974986788797 0.002859702030860054 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 130980 8417 VTDMSDAEQY True H1975_Epitope_Rep3 1157.45466934053 1157.45356993586 37.36 2 0.1524100357206866 0.0007045974986788797 0.0028604636926236266 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 110425 10111 TEYGIGVSA True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 43.933 1 0.15240912138811266 0.0007045974986788797 0.002860523982486349 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 106408 3090 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 17.284 3 0.1524080188040039 0.0007045974986788797 0.0028605966870867655 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 121766 20253 VFNDVRLLL True PC9_epitope_Rep4 1087.6389798426299 1087.6378899358601 86.045 2 0.15238241578219267 0.0007045974986788797 0.002862285473013417 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 95184 21204 RVIDYILDL True PC9_epitope_Rep4 1118.63356010902 1118.6324699358602 89.726 2 0.15237531582469743 0.0007045974986788797 0.002862753965076063 ['ENSG00000117318|ENST00000374561|ID3'] 73190 11289 MRYNEKELQAL True PC9_epitope_Rep4 1393.70238502817 1393.7012899358601 51.201 2 0.15237397945807632 0.0007045974986788797 0.0028628421540291588 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 133547 18060 VWSDVTPLTF True NCI_RA007_Epitope_Rep4 1163.58627556343 1163.5851699358602 78.154 2 0.15235857737609532 0.0007045974986788797 0.0028638587572693197 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 106949 6064 SVEAAAELSAK True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 28.392 2 0.1523422558198425 0.0007045974986788797 0.0028649364423185305 ['ENSG00000159335|ENST00000309083|PTMS'] 30053 17360 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6171499358602 72.027 2 0.15234038160990676 0.0007045974986788797 0.0028650602191275516 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 71101 14897 LYLKALEGF True NCI_RA007_Epitope_Rep4 1052.5906326678798 1052.5895299358601 64.764 2 0.1523334010609272 0.0007045974986788797 0.0028655212763094404 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 96125 13252 RYNPNLNTW True PC9_epitope_Rep2 1176.5676058075198 1176.56650993586 56.249 2 0.15233277309399387 0.0007045974986788797 0.002865562756423111 ['ENSG00000178502|ENST00000319121|KLHL11'] 73397 18744 MTISEFDRL True PC9_epitope_Rep4 1110.53794547202 1110.5368499358601 80.182 2 0.15233226921126267 0.0007045974986788797 0.0028655960406353087 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-4|ABLIM3'] 65959 15344 LSDVFPGVQY True H1975_Epitope_Rep1 1123.5549754351498 1123.5538699358601 64.289 2 0.1523298022309108 0.0007045974986788797 0.00286575900374979 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 9505 5747 AVVTQVNKV True PC9_epitope_Rep4 956.5654805492 956.56438993586 28.938 2 0.15232948180098083 0.0007045974986788797 0.002865780171300232 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 21403 8115 ERIMKAQAL True PC9_epitope_Rep5 1058.5906497512199 1058.58954993586 36.154 2 0.15232112995499317 0.0007045974986788797 0.00286633194787854 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 87480 8109 QQDPQQYNV True PC9_epitope_Rep6 1118.49925146418 1118.49814993586 40.722 2 0.1523167521186409 0.0007045974986788797 0.002866621218147937 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 141039 12722 YSLEPVAVELK True NCI_RA007_Epitope_Rep1 1246.68090422426 1246.67980993586 53.47 2 0.15231474393370517 0.0007045974986788797 0.002866753920870669 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 9676 22274 AYFDVPELI True PC9_epitope_Rep4 1065.5382627418498 1065.5371699358602 93.916 2 0.15231327025182553 0.0007045974986788797 0.0028668513070300343 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 128932 9943 VQIEEVRQV True PC9_epitope_Rep4 1098.6033226098998 1098.6022299358601 45.901 2 0.15230969523305588 0.0007045974986788797 0.0028670875707313883 ['ENSG00000143621|ENST00000361891|ILF2'] 47085 20615 ITTDVLYTI True PC9_epitope_Rep4 1037.5644774896898 1037.5633899358602 87.449 2 0.15230431710578868 0.0007045974986788797 0.0028674430337367273 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 52502 5922 KKYKNIVLL True NCI_RA007_Epitope_Rep3 1117.7223155437698 1117.72120993586 30.273 2 0.15229495313644503 0.0007045974986788797 0.0028680620425703966 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16'] 2854 5900 AEVEPTPEA True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 27.681 1 0.15228283096601095 0.0007045974986788797 0.0028688635811241546 ['ENSG00000186834|ENST00000332499|HEXIM1'] 11757 15054 DHDGNIVEL True PC9_epitope_Rep3 1010.46688870674 1010.46578993586 63.035 2 0.152280767723259 0.0007045974986788797 0.0028690000284756476 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 55029 11797 KYSEVFEAI True NCI_RA007_Epitope_Rep5 1084.54407639828 1084.5429699358601 52.037 2 0.15228044440295072 0.0007045974986788797 0.002869021411034187 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'CSNK2A1|p.N58S|1|0.17|ENSG00000101266|chr20:505158-505158|T/C|missense_variant', 'ENST00000608490.1_1_20:485716-489204:-|nuORF', 'ENST00000460062.6_1_20:480238-524362:-|nuORF', 'ENST00000609606.5_1_20:480440-489246:-|nuORF', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 68126 11570 LTDPIQGTEY True H1975_Epitope_Rep3 1135.53971929383 1135.53917496793 49.632 1 0.15227904212117008 0.0007045974986788797 0.0028691141517799097 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 141551 5897 YTNFDAER True NCI_RA007_Epitope_Rep1 1014.4406739588999 1014.43956993586 26.988 2 0.1522728482834963 0.0007045974986788797 0.0028695238206829297 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 70612 25430 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 105.23 3 0.1522691152730112 0.0007045974986788797 0.00286977075525698 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 100269 14262 SIYNGDMEKI True PC9_epitope_Rep2 1168.5434247752798 1168.5423299358602 60.124 2 0.15226825688201276 0.0007045974986788797 0.0028698275398799118 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 34010 6851 GLTSVINQK True H1975_Epitope_Rep3 958.5447451046199 958.54364993586 31.31 2 0.1522642764295876 0.0007045974986788797 0.0028700908709862645 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 133640 11985 VYAILTHGI True NCI_RA007_Epitope_Rep5 985.5596668927699 985.55856993586 52.761 2 0.152264043943825 0.0007045974986788797 0.0028701062520758154 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 141634 14979 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.49117496793 63.004 1 0.152240607207576 0.0007045974986788797 0.0028716572311208877 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 34013 8931 GLTSVINQK True PC9_epitope_Rep2 958.5447451046199 958.54364993586 39.71 2 0.15223926162020118 0.0007045974986788797 0.0028717463037560608 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 75552 19654 NLAEKLIGV True PC9_epitope_Rep5 955.5702315764698 955.56912993586 80.656 2 0.1522346609105313 0.0007045974986788797 0.0028720508735875163 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 64503 8223 LPQSFQVDTSK True H1975_Epitope_Rep3 1248.6350166609998 1248.6339099358602 36.612 2 0.1522313498927446 0.0007045974986788797 0.0028722700849338687 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 20820 19029 EQIKDIFYI True PC9_epitope_Rep6 1167.6175756917098 1167.61646993586 85.837 2 0.15223020163692855 0.0007045974986788797 0.002872346110980978 ['ENSG00000164902|ENST00000297540|PHAX'] 35911 5010 GTQTVFPSK True NCI_RA007_Epitope_Rep3 963.5025459394699 963.50144993586 26.704 2 0.15222737489836088 0.0007045974986788797 0.002872533277958289 ['ENSG00000156463|ENST00000359120|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-3|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-2|SH3RF2', 'ENST00000511705.1_1_5:145435703-145442261:+|nuORF'] 34799 7733 GQHENIVNL True NCI_RA007_Epitope_Rep3 1022.5145076055 1022.5134099358601 37.54 2 0.15222544194711898 0.0007045974986788797 0.0028726612715483956 ['ENSG00000182578|ENST00000675795|CSF1R'] 2059 7727 AELATRALP True NCI_RA007_Epitope_Rep4 940.5341804209199 940.53308993586 36.394 2 0.15222380562117835 0.0007045974986788797 0.0028727696280410053 ['ENSG00000173801|ENST00000393931|JUP'] 45882 5411 ISDSEGFK True PC9_epitope_Rep1 881.4130622287299 881.41196993586 25.648 2 0.15222184953788992 0.0007045974986788797 0.00287289916401167 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 92213 20703 RLIESLFTI True PC9_epitope_Rep4 1090.63864548946 1090.63754993586 87.795 2 0.15222110707221742 0.0007045974986788797 0.002872948333181901 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 28918 11810 FTDIDGQVY True H1975_Epitope_Rep3 1056.4763907612798 1056.47587496793 50.574 1 0.1522205310035663 0.0007045974986788797 0.002872986483425788 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 15257 12281 EAEPHPLWEY True H1975_Epitope_Rep3 1269.56660274801 1269.56550993586 52.417 2 0.15221923457962291 0.0007045974986788797 0.002873072341167075 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 109915 5431 TEFPSKQV True H1975_Epitope_Rep3 934.4759968384598 934.47488993586 25.95 2 0.1522176331862407 0.0007045974986788797 0.002873178399524862 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 98246 8461 SEVESPAVP True H1975_Epitope_Rep2 913.4392769765699 913.43872496793 37.499 1 0.15221482365574718 0.0007045974986788797 0.002873364480776541 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'ENST00000459751.1_1_10:13234503-13237290:+|nuORF'] 11808 7406 DHFASVHSV True PC9_epitope_Rep5 997.46174375665 997.46064993586 33.442 2 0.15220869641685167 0.0007045974986788797 0.002873770342649206 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 86674 18206 QLIDIIHTA True PC9_epitope_Rep4 1022.5760452329 1022.57494993586 78.098 2 0.15220439360395724 0.0007045974986788797 0.0028740553905999182 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 3532 12815 AGLQFPVGR True PC9_epitope_Rep6 943.5239500903898 943.52284993586 60.795 2 0.15220199288088418 0.0007045974986788797 0.0028742144432692424 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 106164 7140 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4548899358601 32.436 2 0.15219794008396462 0.0007045974986788797 0.0028744829690112044 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 37679 10134 GVYGDVQRV True PC9_epitope_Rep5 991.5086939490699 991.50758993586 43.965 2 0.15219479980572406 0.0007045974986788797 0.002874691051286663 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 100970 20377 SLFPGKLEVV True PC9_epitope_Rep3 1087.62774645259 1087.62664993586 83.631 2 0.15219370014450478 0.0007045974986788797 0.0028747639209922124 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 78329 19932 NYISGIQTI True PC9_epitope_Rep3 1007.52876068731 1007.52766993586 81.911 2 0.15219360676626834 0.0007045974986788797 0.002874770108841442 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 35545 13487 GSVDGVIKEV True PC9_epitope_Rep5 1001.5393253710099 1001.53822993586 56.897 2 0.15218438943117288 0.0007045974986788797 0.002875380974724001 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 76144 19902 NMVDIIHSV True PC9_epitope_Rep3 1026.51681610462 1026.51570993586 81.794 2 0.15216878379502224 0.0007045974986788797 0.0028764155111253653 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 105445 10467 SRVAVVNQI True PC9_epitope_Rep1 984.5716285588001 984.57052993586 45.151 2 0.15216684667821986 0.0007045974986788797 0.0028765439532850313 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 74258 5585 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 26.486 2 0.15216010858411452 0.0007045974986788797 0.002876990772798059 ['ENSG00000167658|ENST00000309311|EEF2'] 90135 6133 REDEISPPPP True H1975_Epitope_Rep1 1135.5509526838698 1135.54984993586 28.66 2 0.15215814218695078 0.0007045974986788797 0.0028771211824424785 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 133874 13527 VYGSFASKL True PC9_epitope_Rep2 970.5123823471799 970.51128993586 57.324 2 0.15215184213310515 0.0007045974986788797 0.0028775390358630796 ['ENSG00000155096|ENST00000337198|AZIN1'] 21201 8911 ERDMSNVSL True PC9_epitope_Rep6 1049.48115887189 1049.48006993586 44.243 2 0.1521518173669504 0.0007045974986788797 0.0028775406786068426 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 115142 9057 TRDEVDATL True PC9_epitope_Rep5 1018.4931034545799 1018.49200993586 39.782 2 0.15215062854810657 0.0007045974986788797 0.002877619534286223 ['DSCC1|p.C98Lfs*7|1|0.32|ENSG00000136982|chr8:119853105-119853105|C/-|frameshift_variant', 'ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 35174 5158 GQYGNPLNK True NCI_RA007_Epitope_Rep3 989.4930438849299 989.49194993586 27.283 2 0.15214820267790197 0.0007045974986788797 0.002877780451641323 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 108502 19584 SYMGHFDLL True PC9_epitope_Rep4 1081.49026700361 1081.48967496793 83.452 1 0.1521426217034589 0.0007045974986788797 0.0028781506933084943 ['ENSG00000169976|ENST00000367569|SF3B5'] 85883 16129 QHFDTIYSI True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 74.383 2 0.15213765971473647 0.0007045974986788797 0.002878479911340167 ['ENSG00000010292|ENST00000315579|NCAPD2'] 38594 14106 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.5441749679298 59.428 1 0.15213216364877666 0.0007045974986788797 0.0028788446081261005 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 72061 19503 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55707496793 81.733 1 0.15212811115366967 0.0007045974986788797 0.002879113544856832 ['ENSG00000198712|ENST00000361739|MT-CO2'] 114726 15202 TQILSVPKV True PC9_epitope_Rep4 983.6015317047498 983.60042993586 66.397 2 0.15212385232616982 0.0007045974986788797 0.002879396201452174 ['nc|ENSG00000120802|P42166|TMPO'] 43796 9134 IHQENMGQAL True PC9_epitope_Rep1 1139.53934245435 1139.5382499358602 39.986 2 0.15212233269827177 0.0007045974986788797 0.002879497065211513 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 6361 7102 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 32.326 2 0.15212162376701793 0.0007045974986788797 0.0028795441210081895 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 134601 21521 VYSIVPQSW True PC9_epitope_Rep5 1077.54949613189 1077.54897496793 87.816 1 0.15211998364839635 0.0007045974986788797 0.002879652987939832 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 131173 12321 VTEKDLLLY True H1975_Epitope_Rep2 1092.60667665484 1092.60617496793 52.478 1 0.15211692939790383 0.0007045974986788797 0.002879855732302939 ['ENSG00000168807|ENST00000336278|SNTB2'] 121629 19146 VFHPSQDLVF True PC9_epitope_Rep2 1187.5975089534697 1187.59640993586 79.016 2 0.15211512494862517 0.0007045974986788797 0.0028799755202292563 ['ENSG00000110107|ENST00000227524|PRPF19'] 7335 9030 ARPPGYEF True PC9_epitope_Rep6 935.45011644379 935.44900993586 44.776 2 0.15211171771918136 0.0007045974986788797 0.0028802017218646607 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 1029 8337 AEAEPEPELA True H1975_Epitope_Rep1 1054.4818700645399 1054.48076993586 36.999 2 0.15211058463210045 0.0007045974986788797 0.0028802769499991572 ['ENSG00000141696|ENST00000393928|P3H4'] 86954 18025 QLVRDLLEV True PC9_epitope_Rep6 1083.62880908175 1083.6277099358601 81.96 2 0.15211040245213123 0.0007045974986788797 0.0028802890455092616 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 77596 6419 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 29.611 2 0.1521014053007769 0.0007045974986788797 0.0028808864581007037 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 125994 8079 VLDQGKITEY True H1975_Epitope_Rep1 1164.60265390356 1164.60154993586 36.019 2 0.15209525733375925 0.0007045974986788797 0.002881294755306332 ['ENSG00000135776|ENST00000344517|ABCB10'] 124939 16050 VHSEQVFAL True PC9_epitope_Rep5 1028.5290950404797 1028.5279899358602 66.724 2 0.15209415802124315 0.0007045974986788797 0.0028813677686429246 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 125257 14472 VILEGELERA True PC9_epitope_Rep2 1127.6186383208699 1127.61754993586 60.937 2 0.15209117516495804 0.0007045974986788797 0.0028815658911027454 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 36609 21476 GVIAEILRGV True PC9_epitope_Rep2 1025.6233297784897 1025.62222993586 88.079 2 0.15209047089063363 0.0007045974986788797 0.002881612671254517 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 24057 11475 EYNSDLHQF True PC9_epitope_Rep2 1151.4883524273098 1151.48724993586 49.455 2 0.15208926496610642 0.0007045974986788797 0.0028816927743733653 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 2344 7027 AEPVEVVAPR True H1975_Epitope_Rep3 1065.5818588893299 1065.5807699358602 31.992 2 0.15208002379670407 0.0007045974986788797 0.0028823066894974924 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 5136 20838 ALLPHLYTL True PC9_epitope_Rep3 1039.60661708519 1039.6055299358602 85.425 2 0.15207989271240852 0.0007045974986788797 0.002882315398708387 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 140191 19899 YQTPRLWLF True PC9_epitope_Rep6 1222.6498788795 1222.6487899358601 89.197 2 0.15207631893445017 0.0007045974986788797 0.00288255284980834 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 99189 19260 SHLDYDITL True PC9_epitope_Rep1 1075.5185899264302 1075.51748993586 78.886 2 0.15207374705449306 0.0007045974986788797 0.0028827237442603385 ['ENSG00000163960|ENST00000296328|UBXN7'] 119854 6185 VDEVGGEALGR True NCI_RA007_Epitope_Rep3 1100.5462016565998 1100.5451099358602 31.335 2 0.15207151766170618 0.0007045974986788797 0.002882871889536104 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'CON__P02070', 'CON__Q3SX09'] 73362 13901 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep3 1136.5423625265598 1136.54126993586 58.782 2 0.1520629965324123 0.0007045974986788797 0.0028834381966099092 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 1843 12397 AEIDLFRAA True H1975_Epitope_Rep2 1004.5290950404799 1004.52798993586 52.77 2 0.152061704518257 0.0007045974986788797 0.002883524072458816 ['ENSG00000167487|ENST00000300976|KLHL26'] 93055 7615 RPNDIM[Oxidation]AEV True PC9_epitope_Rep2 1059.50189469691 1059.5007899358602 34.664 2 0.1520610005757831 0.0007045974986788797 0.0028835708622272525 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 9925 19505 AYLPVNESF True PC9_epitope_Rep4 1038.5022115863 1038.50110993586 83.144 2 0.15205255295681283 0.0007045974986788797 0.0028841324190190974 ['ENSG00000167658|ENST00000309311|EEF2'] 89653 14418 QYTQALEKF True PC9_epitope_Rep3 1126.5658744720197 1126.56476993586 60.564 2 0.15205121091726473 0.0007045974986788797 0.002884221641337554 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 160 11075 AADPSVVNL True H1975_Epitope_Rep3 884.46034677432 884.45924993586 47.692 2 0.15205100397727414 0.0007045974986788797 0.0028842353994970615 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 108446 19160 SYLPLAHMF True PC9_epitope_Rep6 1077.53173789277 1077.53064993586 86.349 2 0.15205063951062464 0.0007045974986788797 0.002884259630788406 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 142426 20218 YYFDSYAHF True PC9_epitope_Rep2 1211.4923751785898 1211.4912699358601 83.186 2 0.15204069130444237 0.0007045974986788797 0.0028849211081343395 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.T357Pfs*4|1|0.34|ENSG00000111218|chr12:3592317-3592317|G/-|frameshift_variant', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF'] 11844 5887 DHHENKYLL True PC9_epitope_Rep4 1167.56727145435 1167.56563490379 29.543 3 0.1520395568522763 0.0007045974986788797 0.0028849965498674527 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 142487 20491 YYIDKLEYL True PC9_epitope_Rep5 1218.6172413385398 1218.6161499358602 83.858 2 0.15203678844005328 0.0007045974986788797 0.0028851806591521398 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 25712 13151 FESEFVHIV True H1975_Epitope_Rep3 1105.54441075145 1105.5433099358602 55.834 2 0.1520361857825016 0.0007045974986788797 0.0028852207395798695 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 104278 17386 SQIHDIVLV True PC9_epitope_Rep3 1022.5760452328999 1022.57494993586 72.045 2 0.15203557800825135 0.0007045974986788797 0.002885261160861332 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 111229 6270 THITAQTAV True PC9_epitope_Rep5 940.4977949122 940.49668993586 29.094 2 0.152028269120853 0.0007045974986788797 0.002885747297702787 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 125951 6224 VLDETRTAY True H1975_Epitope_Rep2 1066.5294889632999 1066.52838993586 28.903 2 0.1520158026072844 0.0007045974986788797 0.002886576672630389 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2', 'nc|ENSG00000100325|Q9H1I8-2|ASCC2', 'ENST00000458594.5_1_22:30197094-30223519:-|nuORF'] 49191 7491 KEMENFEAP True NCI_RA007_Epitope_Rep4 1093.4750108622898 1093.47390993586 35.46 2 0.15201050601378804 0.0007045974986788797 0.002886929117438594 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 20736 7029 EQEVNILK True H1975_Epitope_Rep3 971.5287606873098 971.52766993586 31.999 2 0.15200878345065558 0.0007045974986788797 0.002887043749110792 ['ENSG00000100345|ENST00000216181|MYH9'] 103180 13546 SPIENIQRVAA True PC9_epitope_Rep5 1196.6513354314802 1196.6502299358601 57.128 2 0.15200818862351456 0.0007045974986788797 0.002887083334216901 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 17477 14017 EHFNGVAEL True PC9_epitope_Rep5 1014.4770594676198 1014.47596993586 58.934 2 0.1520078506897547 0.0007045974986788797 0.0028871058235858406 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B'] 40045 10744 HPTEDLVVSA True PC9_epitope_Rep5 1066.5294889632999 1066.52838993586 46.318 2 0.15200461631970674 0.0007045974986788797 0.002887321078567436 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 100180 5905 SITTVQIQK True NCI_RA007_Epitope_Rep3 1016.5866099166 1016.58550993586 30.203 2 0.15200316282075405 0.0007045974986788797 0.0028874178175702994 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 6173 9493 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 41.464 2 0.15199830851893487 0.0007045974986788797 0.002887740923640224 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 128727 7349 VPYEIQKGQA True PC9_epitope_Rep2 1131.59242357303 1131.5913299358601 33.648 2 0.15199797703482099 0.0007045974986788797 0.0028877629887922186 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 11929 16914 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.5480899358602 70.304 2 0.15199660225240746 0.0007045974986788797 0.0028878545026114794 ['ENSG00000273749|ENST00000617928|CYFIP1'] 41441 18813 HYILHNSFF True PC9_epitope_Rep5 1176.5716285587998 1176.5705299358601 77.377 2 0.1519949390207299 0.0007045974986788797 0.0028879652212180982 ['ENSG00000163659|ENST00000295924|TIPARP'] 141873 20545 YVDPVITSI True PC9_epitope_Rep2 1005.53826274185 1005.53716993586 84.459 2 0.15199464817972988 0.0007045974986788797 0.0028879845824612053 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 53145 15985 KPYNVYITV True PC9_epitope_Rep2 1095.59644632431 1095.5953499358602 66.74 2 0.15198956215053525 0.0007045974986788797 0.0028883231795914324 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 96242 15228 RYQDIIHSI True PC9_epitope_Rep1 1143.6036569630699 1143.6020249037902 63.395 3 0.15198671485049342 0.0007045974986788797 0.0028885127529144393 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 11755 15043 DHDGNIVEL True PC9_epitope_Rep1 1010.46688870674 1010.46637496793 62.681 1 0.15198037715872406 0.0007045974986788797 0.0028889347611328834 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 14180 14174 DSDSDQLFY True H1975_Epitope_Rep3 1088.42983449168 1088.42872993586 59.855 2 0.15197996066296804 0.0007045974986788797 0.002888962496508951 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 28996 12412 FTEEQAVLY True H1975_Epitope_Rep1 1098.5233409536997 1098.5222499358601 52.777 2 0.15197804396564443 0.0007045974986788797 0.0028890901370542043 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 117867 9042 TVYSGEEKL True PC9_epitope_Rep3 1024.5076908895599 1024.5065899358601 39.723 2 0.15197230893725897 0.0007045974986788797 0.0028894720891049328 ['ENSG00000166224|ENST00000373202|SGPL1'] 88380 20027 QSLEYLEQV True PC9_epitope_Rep3 1107.54480467427 1107.54370993586 82.283 2 0.151971524262292 0.0007045974986788797 0.00288952435225543 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 90493 5753 RELEQRVSL True NCI_RA007_Epitope_Rep3 1128.62512068364 1128.6234749037899 29.609 3 0.15196786499910486 0.0007045974986788797 0.0028897680893316645 ['ENSG00000160551|ENST00000261716|TAOK1', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 70325 10650 LVSESSDVLPK True PC9_epitope_Rep2 1172.6288686514001 1172.6277699358602 46.278 2 0.15196708927812508 0.0007045974986788797 0.0028898197613713788 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 16386 5449 EEISNLKAA True NCI_RA007_Epitope_Rep3 973.5080252427299 973.50692993586 28.446 2 0.15196653328882193 0.0007045974986788797 0.0028898567972920762 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 4625 8468 ALAAGGYDVEK True PC9_epitope_Rep2 1092.54513902744 1092.5440499358601 37.939 2 0.15196636798477423 0.0007045974986788797 0.002889867808723907 ['ENSG00000184357|ENST00000331442|H1-5'] 54808 13646 KYPDIISRI True PC9_epitope_Rep6 1103.63389446219 1103.63278993586 64.264 2 0.15195317570685923 0.0007045974986788797 0.0028907467233969097 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 17418 5742 EHDPVGQM[Oxidation]V True PC9_epitope_Rep5 1026.4440454676198 1026.44294993586 27.079 2 0.15195071315079212 0.0007045974986788797 0.0028909108167992892 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 105010 12962 SRDKTIIMW True PC9_epitope_Rep6 1148.60121443492 1148.59957490379 61.414 3 0.15194191729468426 0.0007045974986788797 0.002891497007946595 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 39118 15162 HHYEGAVVIL True PC9_epitope_Rep3 1136.5978433066398 1136.59674993586 63.463 2 0.15193665267543008 0.0007045974986788797 0.0028918479199518477 ['ENSG00000163655|ENST00000496455|GMPS'] 3911 8952 AHDDGRWSL True PC9_epitope_Rep2 1055.47845644995 1055.47734993586 39.79 2 0.1519364255631355 0.0007045974986788797 0.00289186305902511 ['ENSG00000075618|ENST00000382361|FSCN1'] 108395 19956 SYLKEFIHI True PC9_epitope_Rep1 1148.62299542532 1148.6213549037902 81.583 3 0.15193132254927424 0.0007045974986788797 0.002892203241530365 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENSG00000131966|ENST00000254286|ACTR10'] 2155 8530 AELQRLVAA True H1975_Epitope_Rep2 969.5607295219298 969.55962993586 37.765 2 0.15192807320743315 0.0007045974986788797 0.0028924198733676363 ['ENSG00000150779|ENST00000504148|TIMM8B'] 36850 19521 GVLKEGFLV True PC9_epitope_Rep1 960.5644179200399 960.56332993586 79.908 2 0.15192696978625542 0.0007045974986788797 0.0028924934415289986 ['ENSG00000100558|ENST00000216446|PLEK2', 'ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 77671 8930 NTIDPSHPM True PC9_epitope_Rep5 1010.4491304676201 1010.44802993586 39.294 2 0.15191913037365767 0.0007045974986788797 0.0028930161706653876 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 97453 13345 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.40686993586 56.594 2 0.15191880708609304 0.0007045974986788797 0.002893037729381398 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 118260 16943 TYLEKFQNL True PC9_epitope_Rep4 1154.5971746002997 1154.5960699358602 73.162 2 0.15191859080136128 0.0007045974986788797 0.002893052152608609 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 66148 12437 LSEPEEAAALY True H1975_Epitope_Rep1 1191.5659340416698 1191.5648299358602 52.875 2 0.15191610509049197 0.0007045974986788797 0.002893217920597624 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF'] 104271 17245 SQIHDIVLV True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 71.151 2 0.15191605132906918 0.0007045974986788797 0.002893221505963457 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 5471 16304 ALVVQVAEA True PC9_epitope_Rep2 898.5123823471799 898.5118349679301 67.958 1 0.15191270111314706 0.0007045974986788797 0.0028934449416278727 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 93389 8145 RQAPIPAEL True NCI_RA007_Epitope_Rep3 993.5607295219298 993.55962993586 39.151 2 0.1519111288679924 0.0007045974986788797 0.0028935498051668386 ['ENSG00000169583|ENST00000494426|CLIC3'] 89410 14054 QYASAFHFL True NCI_RA007_Epitope_Rep5 1082.51853035678 1082.51742993586 60.748 2 0.15191111026419002 0.0007045974986788797 0.0028935510460014395 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 131106 12171 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.52277496793 51.834 1 0.15191050719164506 0.0007045974986788797 0.0028935912699625953 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 98058 8341 SEQPTLVTA True H1975_Epitope_Rep1 944.4814761417199 944.48092496793 37.015 1 0.1519104306005171 0.0007045974986788797 0.002893596378506544 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 98106 13920 SESDYIVMP True H1975_Epitope_Rep2 1039.4532127885498 1039.4526749679299 58.691 1 0.15189781791435786 0.0007045974986788797 0.0028944377533833394 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|4|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1', 'NCOR2-SCARB1|11|fusion', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'SCARB1|p.G379*|1|0.3|ENSG00000073060|chr12:124795254-124795263|GGGGATTCCC/-|frameshift_variant'] 60947 12322 LIDFLESGK True H1975_Epitope_Rep3 1020.54916177872 1020.54806993586 52.579 2 0.15189304908092693 0.0007045974986788797 0.0028947559391752625 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF'] 71890 4088 MENRPSVQA True H1975_Epitope_Rep2 1030.4865786054997 1030.4854899358602 20.815 2 0.15189213078679273 0.0007045974986788797 0.0028948172135376616 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 112786 20842 TLIDLPGITKV True PC9_epitope_Rep3 1168.70672504928 1168.70562993586 85.44 2 0.15189190783174356 0.0007045974986788797 0.002894832090696302 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3'] 7351 7454 ARPSSTITY True PC9_epitope_Rep3 994.5083595959 994.50726993586 33.676 2 0.15188784992298301 0.0007045974986788797 0.002895102876759499 ['ENSG00000159596|ENST00000372025|TMEM69'] 41522 10989 HYPLNTVTF True NCI_RA007_Epitope_Rep3 1090.54474510462 1090.54364993586 50.312 2 0.15188720768701613 0.0007045974986788797 0.002895145735765339 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 132766 20080 VVISSDGQFAL True PC9_epitope_Rep4 1134.5920892198599 1134.59098993586 85.37 2 0.15188602665370785 0.0007045974986788797 0.0028952245525489272 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 17513 12250 EHFPQAYSV True PC9_epitope_Rep4 1076.49270953176 1076.4916099358602 54.936 2 0.1518835253942901 0.0007045974986788797 0.002895391482267782 ['ENSG00000076201|ENST00000265562|PTPN23'] 47567 16923 IVVDNVPQV True PC9_epitope_Rep4 981.5494961318899 981.54838993586 73.082 2 0.15187169817397406 0.0007045974986788797 0.0028961809403362576 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 25517 7340 FEHITAETP True H1975_Epitope_Rep1 1043.49237517859 1043.4912699358601 33.242 2 0.15186346393637254 0.0007045974986788797 0.0028967306961345143 ['SPECC1|p.D330Y|1|0.08|ENSG00000128487|chr17:20205037-20205037|G/T|missense_variant', 'nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1'] 76895 8877 NRDMTTAEI True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 39.095 2 0.15186026187800433 0.0007045974986788797 0.0028969445084411193 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'nc|ENSG00000068885|Q9P2H3-2|IFT80', 'ENSG00000068885|ENST00000326448|IFT80'] 91134 19696 RFVNVVPTF True PC9_epitope_Rep2 1077.5971150306498 1077.5960099358601 81.148 2 0.15185861830658923 0.0007045974986788797 0.0028970542613901266 ['ENSG00000149806|ENST00000529639|FAU'] 24451 21737 FADPDDFTL True PC9_epitope_Rep1 1039.4498416602698 1039.4487499358602 88.443 2 0.15185834842598553 0.0007045974986788797 0.002897072283632832 ['ENSG00000180921|ENST00000388913|FAM83H', 'FAM83H|p.A493P|1|0.23|ENSG00000180921|chr8:143727984-143727984|C/G|missense_variant'] 91663 15648 RITNQVIYL True PC9_epitope_Rep4 1118.64479349906 1118.64368993586 68.118 2 0.15184703951626657 0.0007045974986788797 0.002897827576947608 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 60581 16902 LHGNIITSL True PC9_epitope_Rep3 966.54983048506 966.54872993586 70.172 2 0.15184166163750543 0.0007045974986788797 0.0028981868206172496 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 39434 5850 HKVPGDVSL True NCI_RA007_Epitope_Rep4 950.5185303567799 950.51742993586 29.126 2 0.15183886533499466 0.0007045974986788797 0.002898373631869762 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 77669 7910 NTIDPSHPM True PC9_epitope_Rep4 1010.4491304676201 1010.44802993586 37.857 2 0.15183650919406913 0.0007045974986788797 0.002898531046769363 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 142509 21253 YYIFIPSKF True PC9_epitope_Rep5 1176.6219327961599 1176.62137496793 86.8 1 0.15182865100492263 0.0007045974986788797 0.0028990561177168247 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 45556 6453 IQRTPKIQVYS True H1975_Epitope_Rep3 1331.75613485319 1331.7550299358602 29.795 2 0.15182110785001665 0.0007045974986788797 0.0028995602277493387 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 2811 5845 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep3 863.3694835450299 863.36893496793 27.497 1 0.15181663979517407 0.0007045974986788797 0.0028998588696260165 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77274 12579 NSDELQELY True H1975_Epitope_Rep1 1109.48768372097 1109.4871749679298 53.432 1 0.1518150560962746 0.0007045974986788797 0.0028999647303852116 ['nc|ENSG00000160209|O00764-2|PDXK', 'PDXK|p.E67A|1|0.21|ENSG00000160209|chr21:43741724-43741724|A/C|missense_variant', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 42761 8639 IELVSNSA True H1975_Epitope_Rep3 831.4337976733101 831.43324496793 38.225 1 0.15180873490470714 0.0007045974986788797 0.0029003873024285665 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 107415 20537 SVLNVLHSL True PC9_epitope_Rep5 980.5654805492 980.56438993586 84.039 2 0.15180840178999502 0.0007045974986788797 0.0029004095728690136 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L'] 137475 6537 YEEDPREAV True H1975_Epitope_Rep2 1106.4880180741397 1106.4869299358602 30.055 2 0.1518080227101937 0.0007045974986788797 0.0029004349165205256 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 99013 13761 SHDVVVMTV True PC9_epitope_Rep1 985.49026700361 985.48916993586 57.776 2 0.15180756465010303 0.0007045974986788797 0.0029004655407501977 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 21435 8748 ERIQHAVQL True PC9_epitope_Rep5 1092.60399131624 1092.60288993586 38.591 2 0.151806135643287 0.0007045974986788797 0.0029005610810124522 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 38257 8089 HEEEGILVA True H1975_Epitope_Rep2 995.4923751785898 995.49126993586 36.061 2 0.15180188937677272 0.0007045974986788797 0.002900844995581531 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4'] 138597 6228 YIDQEELNK True NCI_RA007_Epitope_Rep2 1150.5506183307 1150.5495299358602 28.832 2 0.15179780847150634 0.0007045974986788797 0.0029011178798304207 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 83290 13094 PTDEITVYY True H1975_Epitope_Rep3 1099.50735653639 1099.50624993586 55.61 2 0.15178457613298318 0.0007045974986788797 0.0029020028831422216 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000474340.1_1_9:95003027-95004705:-|nuORF'] 5626 12183 ANTFVAELK True PC9_epitope_Rep2 991.5338460677499 991.53274993586 52.174 2 0.1517797184765775 0.0007045974986788797 0.0029023278396910074 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 72259 15010 MHSDMIYNV True PC9_epitope_Rep3 1108.4681516600401 1108.4670499358601 62.862 2 0.1517729163665513 0.0007045974986788797 0.0029027829328393887 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 854 7675 ADEGISFR True NCI_RA007_Epitope_Rep1 893.42429561877 893.42318993586 33.846 2 0.1517688548764104 0.0007045974986788797 0.002903054699526826 ['ENSG00000117450|ENST00000319248|PRDX1'] 140171 16223 YQTEIGQTL True PC9_epitope_Rep3 1051.51858992643 1051.51748993586 67.539 2 0.15175007135400592 0.0007045974986788797 0.0029043118920164895 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 57537 9885 LEDPVHAVV True H1975_Epitope_Rep2 977.5181960036099 977.51708993586 43.011 2 0.1517399661688423 0.0007045974986788797 0.0029049884625377558 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 108815 19176 SYVAGLPRF True PC9_epitope_Rep1 1008.5392658013599 1008.53816993586 78.554 2 0.15173804003737953 0.0007045974986788797 0.0029051174402636745 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF'] 45557 6462 IQRTPKIQVYS True H1975_Epitope_Rep3 1331.75613485319 1331.7544949037901 29.828 3 0.15173569898236364 0.0007045974986788797 0.002905274209805433 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 127377 9315 VNDGDMRLAD True PC9_epitope_Rep1 1104.48697252832 1104.4858699358601 40.686 2 0.15173554047050536 0.0007045974986788797 0.0029052848249103416 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 78399 22618 NYLLYVSNF True PC9_epitope_Rep1 1131.5600608155898 1131.5589699358602 91.809 2 0.15173335209956418 0.0007045974986788797 0.0029054313780664393 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 89630 7044 QYSDVNNRW True NCI_RA007_Epitope_Rep3 1180.52613491836 1180.5250299358602 34.826 2 0.15172594426042765 0.0007045974986788797 0.0029059275287934756 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'ENST00000602898.1_1_2:54753540-54753741:+|nuORF'] 41551 18612 HYSENMFSF True PC9_epitope_Rep4 1160.4596951513201 1160.4585899358601 79.667 2 0.15170710483223282 0.0007045974986788797 0.0029071897070455347 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 129286 20066 VQVPVPVTV True PC9_epitope_Rep3 936.5644179200399 936.56386496793 82.433 1 0.1517067157988387 0.0007045974986788797 0.0029072157767277952 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 98014 5820 SEQETLVRP True H1975_Epitope_Rep2 1057.54038800017 1057.53928993586 27.378 2 0.15170399668749973 0.0007045974986788797 0.0029073979947572 ['nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-5|MDM2', 'nc|ENSG00000135679|Q00987-9|MDM2'] 140290 11269 YRAQPSVSL True PC9_epitope_Rep3 1019.5399940773499 1019.53888993586 48.353 2 0.15170304740256807 0.0007045974986788797 0.0029074616126433294 ['ENSG00000239306|ENST00000310137|RBM14'] 28866 13948 FTDEEVDELY True H1975_Epitope_Rep1 1258.52412879934 1258.5230299358602 58.806 2 0.15169297119897496 0.0007045974986788797 0.0029081369714398565 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 98929 11143 SHAELETAL True PC9_epitope_Rep3 969.47672511445 969.47562993586 47.86 2 0.15169083732883726 0.0007045974986788797 0.0029082800144027924 ['ENST00000469694.5_1_2:241381745-241403123:+|nuORF', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENSG00000063660|ENST00000264039|GPC1'] 140417 13705 YRFNGQYSSL True PC9_epitope_Rep4 1233.5778361380499 1233.5767299358602 60.604 2 0.15168783753122006 0.0007045974986788797 0.002908481116253083 ['ENST00000592618.5_1_19:1010351-1011343:-|nuORF', 'ENSG00000182087|ENST00000356663|TMEM259'] 17906 8060 EIAEAYLGK True H1975_Epitope_Rep3 992.5178616504398 992.51676993586 35.976 2 0.15168146965238555 0.0007045974986788797 0.002908908055042149 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 104647 20261 SQTDFSQLL True PC9_epitope_Rep4 1037.50293986229 1037.5023749679299 86.077 1 0.1516749682882611 0.0007045974986788797 0.0029093440078561635 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 141679 11343 YTTDRVMTV True PC9_epitope_Rep1 1084.5222954078802 1084.52118993586 48.509 2 0.15167111180503753 0.0007045974986788797 0.002909602637373967 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 22411 4841 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56219490379 23.746 3 0.1516708408700121 0.0007045974986788797 0.0029096208081040515 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 98310 9404 SEVQYIQEA True H1975_Epitope_Rep2 1065.4978544818498 1065.49727496793 41.138 1 0.15166626116459433 0.0007045974986788797 0.0029099279711432098 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 29109 17373 FTLDHVQEI True PC9_epitope_Rep2 1100.55022440788 1100.54912993586 72.083 2 0.1516641511681238 0.0007045974986788797 0.002910069500488894 ['ENST00000371317.9_1_X:119737922-119739264:+|nuORF'] 78256 11196 NYIDKVRFL True NCI_RA007_Epitope_Rep3 1166.64479349906 1166.64313490379 51.145 3 0.15166323508559912 0.0007045974986788797 0.002910130949437707 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 72120 17812 M[Oxidation]FLSFPTTK True PC9_epitope_Rep5 1086.54196860374 1086.5408699358602 73.533 2 0.15166314332688674 0.0007045974986788797 0.0029101371044963522 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 95859 15229 RYKLYQEMF True PC9_epitope_Rep4 1276.6274291827597 1276.6263299358602 66.508 2 0.15165985004875862 0.0007045974986788797 0.002910358022023914 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 78501 19964 NYNQHAMVFF True PC9_epitope_Rep5 1269.5600778989299 1269.5589899358602 81.846 2 0.15165678864688517 0.0007045974986788797 0.002910563399964657 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 34915 9323 GQMKEPIQL True NCI_RA007_Epitope_Rep4 1042.5481162329 1042.5470099358602 42.716 2 0.15165425383511869 0.0007045974986788797 0.0029107334618818812 ['ENSG00000105483|ENST00000651546|CARD8', 'ENST00000517510.5_1_19:48707456-48744240:-|nuORF', 'ENST00000522773.5_1_19:48714969-48736545:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-7|CARD8', 'ENST00000522051.5_1_19:48714969-48735770:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-1|CARD8', 'nc|ENSG00000105483|Q9Y2G2-4|CARD8'] 78619 10424 NYSSAVQKF True PC9_epitope_Rep1 1042.5083595959 1042.5072699358602 44.982 2 0.15165167110154995 0.0007045974986788797 0.0029109067490808915 ['OPHN1|p.K700Rfs*7|1|0.44|ENSG00000079482|chrX:68063915-68063915|G/-|frameshift_variant', 'ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 116302 6018 TTDSSYGQNY True H1975_Epitope_Rep2 1134.4465471849799 1134.44544993586 28.126 2 0.15164881193432275 0.0007045974986788797 0.002911098595442595 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 117989 6541 TYDNVHQQF True NCI_RA007_Epitope_Rep4 1150.5043368446202 1150.5032299358602 31.773 2 0.15164707950819875 0.0007045974986788797 0.002911214845086094 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 70504 17710 LVVTNLDKL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 72.917 2 0.15163702578340965 0.0007045974986788797 0.002911889563666162 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 76763 7232 NQWDGTQHGV True PC9_epitope_Rep4 1140.49483479008 1140.49372993586 35.123 2 0.15163537827739382 0.0007045974986788797 0.0029120001447983162 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 26799 20751 FLADPSAFVAA True PC9_epitope_Rep4 1107.5600608155898 1107.5589699358602 87.974 2 0.15163210380047246 0.0007045974986788797 0.0029122199411602515 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 40604 15230 HRIFEPNCL True PC9_epitope_Rep5 1127.5545985956699 1127.5535099358601 63.591 2 0.15162597012343357 0.0007045974986788797 0.002912631703273025 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF'] 104705 14848 SQVDRLVAL True PC9_epitope_Rep4 999.5712942056298 999.57018993586 65.052 2 0.15161981263209884 0.0007045974986788797 0.0029130451224100543 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 20048 14142 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 59.552 2 0.15161820426647776 0.0007045974986788797 0.0029131531190568203 ['ENSG00000182195|ENST00000370526|LDOC1'] 87418 16103 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.4631649679301 66.758 1 0.1516181183564967 0.0007045974986788797 0.0029131588877516013 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 65828 5256 LSDLDSETR True NCI_RA007_Epitope_Rep2 1034.48801807414 1034.4869299358602 25.065 2 0.15161416163926392 0.0007045974986788797 0.0029134245862563594 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000484772.1_1_1:27271971-27272669:+|nuORF'] 28935 10389 FTDPGQVAY True H1975_Epitope_Rep2 996.4552613938799 996.45471496793 44.972 1 0.1516107735606041 0.0007045974986788797 0.002913652119157391 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 36452 8180 GVGEFEAGISK True H1975_Epitope_Rep1 1092.5451390274397 1092.5440499358601 36.404 2 0.15160735420310234 0.0007045974986788797 0.0029138817705975134 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000547505.2_1_12:44053856-44053916:+|nuORF', 'ENST00000559385.1_1_15:53230314-53230413:-|nuORF'] 131107 12203 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.5222499358601 52.021 2 0.15160679539960586 0.0007045974986788797 0.0029139193027623127 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 138393 6504 YHGNTNPEL True PC9_epitope_Rep1 1043.46722305991 1043.4661299358602 29.821 2 0.15160493328471025 0.0007045974986788797 0.0029140443756121236 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 115096 13593 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61278993586 64.035 2 0.15160349141042445 0.0007045974986788797 0.002914141225794465 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 133830 19469 VYGFLRNGF True PC9_epitope_Rep2 1071.5501648382299 1071.5490699358602 80.267 2 0.15160207824653024 0.0007045974986788797 0.002914236150621597 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 29318 16830 FVDEPLIHA True PC9_epitope_Rep1 1039.5338460677497 1039.53274993586 69.561 2 0.15159929348797258 0.0007045974986788797 0.0029144232170099254 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 76460 13467 NQFPGFKEV True PC9_epitope_Rep6 1064.52909504048 1064.5279899358602 63.495 2 0.15159604842853558 0.0007045974986788797 0.0029146412192401217 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 120776 9739 VELDNM[Oxidation]PLR True PC9_epitope_Rep2 1101.54884488933 1101.54774993586 42.802 2 0.15159385890896776 0.0007045974986788797 0.0029147883197607814 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 90686 6350 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 29.355 2 0.1515931889927358 0.0007045974986788797 0.0029148333288409756 ['ENSG00000129250|ENST00000320785|KIF1C'] 106162 7328 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4548899358601 33.127 2 0.15159160351727222 0.0007045974986788797 0.0029149398535627115 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 90783 14972 RESFPAPVVIL True H1975_Epitope_Rep2 1226.7023083751799 1226.70120993586 62.742 2 0.15158786650576334 0.0007045974986788797 0.0029151909507557664 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 1035 6324 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.4179949679301 29.258 1 0.15157533484630245 0.0007045974986788797 0.0029160331350315464 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 35646 11659 GTDMEPSLY True H1975_Epitope_Rep2 1011.42191266027 1011.4213749679301 49.918 1 0.1515709346309099 0.0007045974986788797 0.002916328906927346 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 99406 4748 SHVSGTTTL True PC9_epitope_Rep3 901.45051036661 901.44940993586 23.352 2 0.1515672308036126 0.0007045974986788797 0.002916577892455855 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 104328 8855 SQIQEFKEA True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 39.012 2 0.15156466920977008 0.0007045974986788797 0.002916750105042181 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 105841 4931 SSLNLRETN True NCI_RA007_Epitope_Rep5 1032.51998690876 1032.5188899358602 25.668 2 0.1515609048854406 0.0007045974986788797 0.0029170031939989285 ['ENSG00000026025|ENST00000544301|VIM'] 53386 19094 KQVEEIFNL True PC9_epitope_Rep2 1118.5971746003 1118.5960699358602 78.814 2 0.15155707287749803 0.0007045974986788797 0.002917260856037488 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 89001 16067 QVISELDKL True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 69.735 2 0.15155008226689484 0.0007045974986788797 0.0029177309591356983 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5'] 138337 8279 YHEGSAPAL True PC9_epitope_Rep5 943.4399456829099 943.43884993586 36.784 2 0.15154949110933552 0.0007045974986788797 0.002917770716634375 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 98983 18901 SHDEVFVVL True PC9_epitope_Rep4 1043.52876068731 1043.52766993586 80.79 2 0.15154570370149228 0.0007045974986788797 0.0029180254464096413 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 42433 4985 IEDSPTKRLP True H1975_Epitope_Rep2 1154.62953735774 1154.62789490379 24.258 3 0.15154410979742902 0.0007045974986788797 0.0029181326542748343 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF'] 78243 12902 NYGRVFSEW True NCI_RA007_Epitope_Rep1 1156.53015766964 1156.5290699358602 54.177 2 0.15153456498689233 0.0007045974986788797 0.0029187747315847635 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 54851 21787 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 88.632 2 0.15153030413550564 0.0007045974986788797 0.0029190614035568803 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 40506 10737 HRDSGILGL True PC9_epitope_Rep6 966.5246783663799 966.52358993586 52.121 2 0.15152410312862258 0.0007045974986788797 0.0029194786601668293 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 97906 13910 SEMLEIVQA True H1975_Epitope_Rep2 1018.5004973341398 1018.49997496793 58.652 1 0.15152226656727363 0.0007045974986788797 0.002919602251076314 ['ENSG00000115756|ENST00000307845|HPCAL1'] 134021 8670 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 40.838 3 0.1515193203791711 0.0007045974986788797 0.002919800524911327 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 114723 15896 TQILSVPKV True PC9_epitope_Rep2 983.6015317047498 983.60042993586 66.398 2 0.15151901166531645 0.0007045974986788797 0.0029198213016455895 ['nc|ENSG00000120802|P42166|TMPO'] 22340 9252 ETDPQTISAY True H1975_Epitope_Rep2 1123.50333378511 1123.5022299358602 40.544 2 0.151508086309879 0.0007045974986788797 0.0029205566832386527 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 130999 10336 VTDPSTLEQY True H1975_Epitope_Rep2 1151.53463391339 1151.53352993586 44.766 2 0.1515007519015426 0.0007045974986788797 0.0029210504630277708 ['ENSG00000197081|ENST00000356956|IGF2R'] 31670 10153 GEFSITYKP True H1975_Epitope_Rep3 1040.5178616504397 1040.51676993586 44.098 2 0.1514960417110568 0.0007045974986788797 0.0029213676145137804 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 28459 14016 FSDLYNEVY True H1975_Epitope_Rep3 1148.50260550912 1148.5015099358602 59.233 2 0.15148200383607557 0.0007045974986788797 0.0029223130309120383 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 112482 15698 TLDLIDEAY True H1975_Epitope_Rep2 1051.50735653639 1051.50624993586 65.551 2 0.15147661835633794 0.0007045974986788797 0.0029226758106317982 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:418974-419244:-|nuORF'] 78646 19870 NYTLVSHLI True PC9_epitope_Rep5 1058.5760452329 1058.57494993586 81.482 2 0.1514752278744247 0.0007045974986788797 0.002922769484344546 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 115775 13237 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45454993586 56.045 2 0.15146402553896493 0.0007045974986788797 0.0029235242701993974 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 54710 15595 KYMDIEFDF True NCI_RA007_Epitope_Rep3 1206.5267120819797 1206.52560993586 68.927 2 0.15146004736314428 0.0007045974986788797 0.0029237923566356083 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF', 'ENSG00000166866|ENST00000300119|MYO1A'] 17704 7667 EHNDLQYAA True PC9_epitope_Rep5 1059.46213767947 1059.46104993586 34.435 2 0.15145642396096876 0.0007045974986788797 0.0029240365564391527 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 28478 11696 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44364993586 49.98 2 0.15145330290921963 0.0007045974986788797 0.002924246916538298 ['ENSG00000170779|ENST00000336219|CDCA4'] 26382 12456 FHVEPGLQRL True PC9_epitope_Rep4 1194.6509415086598 1194.6493049037902 55.719 3 0.1514521943189192 0.0007045974986788797 0.0029243216395831604 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 1271 6813 AEDLNRLTA True H1975_Epitope_Rep2 1001.51417325233 1001.51306993586 31.125 2 0.15144423441372812 0.0007045974986788797 0.0029248582221972517 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000262816.11_1_19:19456115-19463084:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 128213 13732 VPNKFLVTA True PC9_epitope_Rep1 987.5753169569099 987.57420993586 57.667 2 0.1514415336986124 0.0007045974986788797 0.002925040301520298 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 40755 16639 HRTEMDWVL True PC9_epitope_Rep2 1185.5600778989299 1185.5589899358602 69.247 2 0.15143920936883826 0.0007045974986788797 0.002925197014386961 ['ENSG00000169813|ENST00000682386|HNRNPF'] 122994 12759 VGIDIFTGK True NCI_RA007_Epitope_Rep2 948.52803241132 948.52692993586 54.248 2 0.1514298416586535 0.0007045974986788797 0.0029258286966061795 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 86261 5760 QIQDSIVTK True NCI_RA007_Epitope_Rep5 1030.56587447202 1030.56476993586 28.843 2 0.1514292832624029 0.0007045974986788797 0.0029258663546008657 ['ENSG00000196466|ENST00000430385|ZNF799', 'nc|ENSG00000196466|Q96GE5-2|ZNF799', 'ENSG00000180855|ENST00000301547|ZNF443'] 134716 22511 VYTPVDSLVF True PC9_epitope_Rep3 1138.5910265906998 1138.58992993586 91.865 2 0.15142461970757673 0.0007045974986788797 0.0029261808815190388 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 104984 15945 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.59957490379 66.142 3 0.15142238034541697 0.0007045974986788797 0.0029263319241303537 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 118501 10465 TYQDIQNTI True NCI_RA007_Epitope_Rep3 1094.52440358286 1094.5233099358602 48.228 2 0.15142166583472516 0.0007045974986788797 0.0029263801187558195 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 91815 4147 RKIKVSNTL True NCI_RA007_Epitope_Rep4 1057.66077791637 1057.6596899358601 22.245 2 0.15141973033666106 0.0007045974986788797 0.002926510674454047 ['nc|ENSG00000131100|P36543-3|ATP6V1E1', 'nc|ENSG00000131100|P36543-2|ATP6V1E1', 'ENSG00000131100|ENST00000253413|ATP6V1E1'] 78295 19172 NYINDLRNF True PC9_epitope_Rep2 1167.56727145435 1167.5661699358602 79.117 2 0.15141067171122327 0.0007045974986788797 0.0029271217856064657 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 89058 11626 QVLSEVSRV True PC9_epitope_Rep5 1015.56620882519 1015.56510993586 49.714 2 0.15140943998339274 0.0007045974986788797 0.0029272048899966546 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 117993 9379 TYDNVHQQF True PC9_epitope_Rep3 1150.5043368446202 1150.5032299358602 41.015 2 0.15140854127297965 0.0007045974986788797 0.0029272655272622253 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 7574 8078 ASETLQSPGY True H1975_Epitope_Rep1 1051.48220441771 1051.48110993586 36.015 2 0.15140553036649146 0.0007045974986788797 0.002927468686509649 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1'] 24626 23003 FAISILQQL True PC9_epitope_Rep5 1031.60153170475 1031.6004299358601 93.471 2 0.15140360683941842 0.0007045974986788797 0.002927598482786028 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 120524 16435 VEFLEPLEA True H1975_Epitope_Rep3 1045.5331773614098 1045.53208993586 68.701 2 0.15140221368596493 0.0007045974986788797 0.002927692493948455 ['ENSG00000122965|ENST00000261741|RBM19'] 45250 17839 IPTPIVGV True PC9_epitope_Rep6 794.49019035062 794.48908993586 81.246 2 0.15139616051632576 0.0007045974986788797 0.002928101001828716 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 85249 9077 QEQFNSIAA True H1975_Epitope_Rep2 1006.4719740871798 1006.47086993586 39.866 2 0.1513944277233418 0.0007045974986788797 0.0029282179526009355 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 133706 18263 VYAVIPAEKF True PC9_epitope_Rep5 1135.62774645259 1135.62664993586 75.263 2 0.1513917113654484 0.0007045974986788797 0.002928401296129584 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 77112 15479 NRMDYYNAL True PC9_epitope_Rep3 1158.51279335334 1158.5116899358602 64.691 2 0.1513823897901961 0.0007045974986788797 0.002929030552941676 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 61420 11608 LIVENLSSR True PC9_epitope_Rep2 1029.5818588893299 1029.5807699358602 49.977 2 0.15138063411335592 0.0007045974986788797 0.0029291490857092178 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENSG00000116350|ENST00000373795|SRSF4', 'nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5'] 115260 10702 TREEGTPLTL True PC9_epitope_Rep6 1115.5822528121498 1115.5811499358601 51.977 2 0.15137894328558502 0.0007045974986788797 0.002929263244773473 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 77248 7101 NRYDGQVAV True PC9_epitope_Rep2 1020.4988575413598 1020.49776993586 32.712 2 0.15137821397757856 0.0007045974986788797 0.002929312486591138 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1', 'ENST00000490869.1_1_X:47062096-47065733:+|nuORF'] 101807 12831 SLPEELQKC True PC9_epitope_Rep1 1045.51139637101 1045.51028993586 54.229 2 0.1513723351099488 0.0007045974986788797 0.002929709449311764 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 117766 20016 TVVNFLIRV True PC9_epitope_Rep4 1059.64406522307 1059.64296993586 85.125 2 0.15136361502225706 0.0007045974986788797 0.002930298360333069 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 115328 15096 TRIGLETSL True PC9_epitope_Rep1 988.55530978832 988.55420993586 62.886 2 0.15135322015991245 0.0007045974986788797 0.002931000531311546 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 106120 9281 STDKAEYTFY True H1975_Epitope_Rep2 1223.53463391339 1223.53352993586 40.657 2 0.15135053778996188 0.0007045974986788797 0.002931181752096609 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 109834 12146 TEELAYLK True PC9_epitope_Rep1 965.50696261357 965.50586993586 51.581 2 0.1513316687425938 0.0007045974986788797 0.002932456859479154 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 62629 22419 LLLEILHEI True PC9_epitope_Rep2 1091.6590465808702 1091.6579499358602 91.727 2 0.15132198805220506 0.0007045974986788797 0.002933111262739979 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 77125 13673 NRNAEEFEL True PC9_epitope_Rep5 1120.51490152832 1120.51380993586 57.618 2 0.15131894680707847 0.0007045974986788797 0.002933316877353193 ['ENSG00000138382|ENST00000260953|METTL5'] 21506 19289 ERLSYTQLL True PC9_epitope_Rep5 1121.6080736371698 1121.6069699358602 79.238 2 0.15131854631897856 0.0007045974986788797 0.002933343954900698 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 40137 12669 HQADIGEYV True PC9_epitope_Rep1 1030.47197408718 1030.47086993586 53.602 2 0.15131848669487882 0.0007045974986788797 0.0029333479861888244 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 12753 9805 DLEIATYR True NCI_RA007_Epitope_Rep1 979.4974605590301 979.49636993586 42.142 2 0.15131389280987112 0.0007045974986788797 0.0029336586032636235 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 98197 8718 SETEYVIRC True H1975_Epitope_Rep3 1098.5015599633 1098.50046993586 38.535 2 0.15131243971355224 0.0007045974986788797 0.002933756861679077 ['ENSG00000181789|ENST00000314797|COPG1'] 38218 7339 HEAIETDIAA True H1975_Epitope_Rep2 1068.50875351872 1068.5076499358602 33.17 2 0.1513067150164251 0.0007045974986788797 0.002934143997764945 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 115398 12727 TRLEFQQQL True PC9_epitope_Rep6 1161.61422164677 1161.6131299358601 60.441 2 0.15130645489096892 0.0007045974986788797 0.00293416159011398 ['ENSG00000171159|ENST00000372994|BBLN'] 105500 6963 SRYSSTETL True PC9_epitope_Rep5 1042.49310345458 1042.49200993586 31.751 2 0.15130450085386163 0.0007045974986788797 0.002934293745486739 ['ENSG00000110237|ENST00000263674|ARHGEF17'] 88610 10784 QTDQM[Oxidation]VFNAY True H1975_Epitope_Rep2 1231.51793868387 1231.5168499358601 46.511 2 0.15130357978252548 0.0007045974986788797 0.0029343560414088576 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 68057 11868 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48076993586 50.8 2 0.15129716566140114 0.0007045974986788797 0.002934789891886137 ['ENSG00000174231|ENST00000304992|PRPF8'] 118651 13469 TYSPALNKM[Oxidation]F True PC9_epitope_Rep3 1186.5692459807399 1186.5681499358602 56.857 2 0.15129580912896942 0.0007045974986788797 0.0029348816557823966 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 115464 8228 TRMSTVSEL True PC9_epitope_Rep6 1022.5066453437399 1022.5055499358599 41.232 2 0.15129563376514302 0.0007045974986788797 0.002934893518639928 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 107252 15849 SVKNGFLTI True PC9_epitope_Rep4 977.55458151233 977.55348993586 68.888 2 0.15127848684789263 0.0007045974986788797 0.0029360536888738465 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 1050 11388 AEAESMYQI True H1975_Epitope_Rep2 1040.44846176128 1040.44736993586 48.853 2 0.15127635193338984 0.0007045974986788797 0.0029361981703876173 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 52999 10186 KPHAPIISI True PC9_epitope_Rep4 974.5913013742199 974.59020993586 46.858 2 0.15127115579086578 0.0007045974986788797 0.0029365498517882524 ['ENSG00000137962|ENST00000260526|ARHGAP29'] 49038 8347 KEGEFTLSA True H1975_Epitope_Rep3 980.4814761417199 980.48036993586 37.091 2 0.1512675554126557 0.0007045974986788797 0.002936793554479945 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 133664 19544 VYAPPVGGF True PC9_epitope_Rep2 905.4647038787698 905.46360993586 80.559 2 0.15126715180869524 0.0007045974986788797 0.0029368208749132245 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 77579 12780 NTDPSIVMTY True H1975_Epitope_Rep3 1139.51687567427 1139.5157699358601 54.374 2 0.15126197511486594 0.0007045974986788797 0.0029371713139391114 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 109645 4293 TEAPLNPKA True H1975_Epitope_Rep2 939.5025459394699 939.50144993586 21.626 2 0.15126018824589438 0.0007045974986788797 0.0029372922866489873 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 98327 15318 SEWDGIVTV True NCI_RA007_Epitope_Rep4 1004.4814761417199 1004.48036993586 66.575 2 0.15125950895266374 0.0007045974986788797 0.002937338276741551 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 26800 21607 FLADPSAFVAA True PC9_epitope_Rep5 1107.5600608155898 1107.5589699358602 88.151 2 0.15125553065070907 0.0007045974986788797 0.002937607633552121 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 204 9274 AAFDGGFTVK True NCI_RA007_Epitope_Rep3 1011.5025459394699 1011.50144993586 43.589 2 0.15125313235022222 0.0007045974986788797 0.002937770025916189 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 115443 13272 TRMPDGPVAL True PC9_epitope_Rep4 1055.54336520563 1055.54226993586 58.946 2 0.15125242023981691 0.0007045974986788797 0.002937818245654307 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 88235 7611 QSDKVYEVY True H1975_Epitope_Rep3 1129.52915461013 1129.52804993586 34.256 2 0.1512366775335083 0.0007045974986788797 0.0029388844463155888 ['ENSG00000156162|ENST00000414645|DPY19L4', 'ENST00000456901.1_1_7:145280818-145281352:+|nuORF'] 74855 17059 NHFPGSFQI True PC9_epitope_Rep4 1045.49812926537 1045.4970299358602 73.613 2 0.15123343030754896 0.0007045974986788797 0.0029391044179778976 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 72223 18764 MHDFNLISI True PC9_epitope_Rep6 1088.53246616876 1088.53136993586 84.816 2 0.15122954755115975 0.0007045974986788797 0.002939367462896187 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 87997 12686 QRNPQGFVL True PC9_epitope_Rep2 1057.5668775315298 1057.56578993586 54.103 2 0.151229468764239 0.0007045974986788797 0.0029393728007128203 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 95141 19532 RVFSDIIYTV True PC9_epitope_Rep4 1211.65502382959 1211.65392993586 83.251 2 0.15122481462318896 0.0007045974986788797 0.002939688136063804 ['ENSG00000125676|ENST00000245838|THOC2'] 19448 5575 ELNITAAK True NCI_RA007_Epitope_Rep5 858.4810822188999 858.47998993586 28.131 2 0.15122410173583306 0.0007045974986788797 0.0029397364398071842 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 140000 20892 YQDPVTLQL True PC9_epitope_Rep3 1075.55497543515 1075.5538699358601 85.637 2 0.1512214780648634 0.0007045974986788797 0.002939914221026664 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 21746 6479 ERTQENVTL True PC9_epitope_Rep4 1088.5462016565998 1088.5451099358602 32.038 2 0.15122063902341557 0.0007045974986788797 0.002939971077142763 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 78345 15223 NYKDLNGNVF True PC9_epitope_Rep3 1182.5669371011797 1182.5658499358601 63.701 2 0.15121850921976351 0.0007045974986788797 0.002940115404328301 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 84266 21573 PYNPILGETF True PC9_epitope_Rep5 1149.57062549929 1149.5695299358601 88.02 2 0.1512154689036169 0.0007045974986788797 0.0029403214450663185 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 105793 12422 SSIDGLHQI True PC9_epitope_Rep5 968.49270953176 968.49160993586 52.78 2 0.15120962453056508 0.0007045974986788797 0.0029407175557671804 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 86321 15376 QITVNDLPVGR True PC9_epitope_Rep1 1210.6669854956199 1210.6658899358602 63.961 2 0.15120820753170647 0.0007045974986788797 0.0029408136028871382 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 106836 16225 SVASELEKI True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 67.656 2 0.15120748252224986 0.0007045974986788797 0.002940862746739374 ['ENSG00000172244|ENST00000306862|C5orf34'] 46639 6016 ITDKNSLAY True H1975_Epitope_Rep2 1023.52367530687 1023.5225699358599 28.12 2 0.15120307979008563 0.0007045974986788797 0.0029411611979575304 ['ENSG00000163510|ENST00000410053|CWC22'] 111818 19085 TILPKVMQV True PC9_epitope_Rep1 1027.6099882134697 1027.6088899358601 78.201 2 0.15119861077227387 0.0007045974986788797 0.002941464173383411 ['ENSG00000140259|ENST00000267812|MFAP1', 'ENST00000484386.1_1_15:44097294-44102132:-|nuORF'] 130119 13535 VSDPVGVLY True H1975_Epitope_Rep2 947.49639792987 947.4958449679301 57.199 1 0.15119526319750992 0.0007045974986788797 0.0029416911413533598 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 137480 7590 YEEDSYSHIM[Oxidation]A True H1975_Epitope_Rep2 1359.52889729039 1359.52778993586 34.147 2 0.15119502866184537 0.0007045974986788797 0.002941707043693522 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 97245 9762 SEADIRGFVA True NCI_RA007_Epitope_Rep4 1063.52982331647 1063.5287299358602 44.398 2 0.15119478679202217 0.0007045974986788797 0.002941723443405035 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 48166 11025 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 50.185 3 0.1511845335514354 0.0007045974986788797 0.002942418736622326 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 114727 16234 TQILSVPKV True PC9_epitope_Rep5 983.6015317047498 983.60042993586 67.433 2 0.15118228354578309 0.0007045974986788797 0.0029425713360085115 ['nc|ENSG00000120802|P42166|TMPO'] 22146 6175 ESSAGGSFTVR True PC9_epitope_Rep2 1096.51490152832 1096.51380993586 29.143 2 0.1511816817525956 0.0007045974986788797 0.0029426121520292527 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 40384 18239 HQTIVVQLL True PC9_epitope_Rep4 1049.62332977849 1049.62222993586 78.225 2 0.1511801014383868 0.0007045974986788797 0.0029427193379439596 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 103929 17548 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51289496793 72.291 1 0.15117431347393054 0.0007045974986788797 0.0029431119438812483 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 94707 6002 RSDPGGGGLAY True H1975_Epitope_Rep2 1048.49377216092 1048.49266993586 28.065 2 0.15116319359956612 0.0007045974986788797 0.0029438663673339435 ['ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 85108 10431 QELEQTGLRP True PC9_epitope_Rep3 1169.6040508858898 1169.6029499358601 45.061 2 0.15115623687721463 0.0007045974986788797 0.0029443384413412074 ['nc|ENSG00000226777|Q9NZY2|FAM30A'] 105771 3725 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 20.467 2 0.1511551582454874 0.0007045974986788797 0.0029444116426198272 ['ENSG00000115207|ENST00000264720|GTF3C2'] 74860 16132 NHFPGSFQI True PC9_epitope_Rep6 1045.49812926537 1045.4970299358602 74.394 2 0.1511479221033998 0.0007045974986788797 0.002944902769850973 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 108495 20716 SYMGHFDLL True PC9_epitope_Rep1 1081.49026700361 1081.4891699358602 84.509 2 0.1511451655888851 0.0007045974986788797 0.0029450898798638325 ['ENSG00000169976|ENST00000367569|SF3B5'] 27123 21370 FLIQHLPLV True PC9_epitope_Rep3 1078.65390163078 1078.6528099358602 87.498 2 0.15114178699873895 0.0007045974986788797 0.002945319232027481 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 28146 21913 FRDFIPVVL True PC9_epitope_Rep1 1104.6331661861998 1104.63206993586 89.104 2 0.15114028982968442 0.0007045974986788797 0.0029454208715180064 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 118166 17219 TYIQKIFRM True PC9_epitope_Rep2 1198.65325000778 1198.65160490379 71.492 3 0.15113747680003384 0.0007045974986788797 0.0029456118513183772 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 140758 16905 YSDEFGNLDF True H1975_Epitope_Rep2 1205.4876837209702 1205.4871749679298 70.272 1 0.15113513555709132 0.0007045974986788797 0.002945770810384259 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 57434 6669 LEATSAVSA True H1975_Epitope_Rep3 847.4287122928699 847.42816496793 30.606 1 0.15113149697820594 0.0007045974986788797 0.0029460178692407427 ['ENSG00000205208|ENST00000379205|C4orf46', 'ENST00000508836.1_1_4:159590767-159593157:-|nuORF'] 95187 10092 RVIEGDVVSA True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 43.691 2 0.1511311974193634 0.0007045974986788797 0.002946038210152158 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 111853 16024 TIMPKDIQL True PC9_epitope_Rep6 1057.58416738845 1057.58306993586 73.962 2 0.1511295209673975 0.0007045974986788797 0.0029461520486693026 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 73374 10328 MTEPIDEY True H1975_Epitope_Rep2 996.4110136233999 996.41046496793 44.735 1 0.15112887080082454 0.0007045974986788797 0.0029461961990397347 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 38974 18831 HHIYLEGTLL True PC9_epitope_Rep5 1194.6397081186199 1194.63805490379 77.448 3 0.15112811861370368 0.0007045974986788797 0.002946247278064706 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 115333 13361 TRIGLETSL True PC9_epitope_Rep4 988.55530978832 988.55420993586 59.296 2 0.15111975180600867 0.0007045974986788797 0.0029468155051799666 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 28126 16308 FRAPQVMTY True PC9_epitope_Rep1 1111.54845058607 1111.5473499358602 67.548 2 0.15111236962328434 0.0007045974986788797 0.002947316952679645 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263', 'CCDC113|p.V325I|1|0.42|ENSG00000103021|chr16:58278563-58278563|G/A|missense_variant'] 115457 9086 TRMSTVSEL True PC9_epitope_Rep2 1022.5066453437399 1022.5055499358599 40.291 2 0.15110509525437163 0.0007045974986788797 0.0029478111598793986 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 40542 17313 HRFPFSSAL True PC9_epitope_Rep5 1060.5454138109599 1060.5443099358602 71.596 2 0.15110366012985302 0.0007045974986788797 0.00294790866933877 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 137326 15146 YDGIILPGK True PC9_epitope_Rep1 974.54368247546 974.54258993586 63.081 2 0.15110162112603764 0.0007045974986788797 0.002948047214869937 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 78438 20157 NYLSIFRKF True PC9_epitope_Rep5 1186.6498788795 1186.6482449037899 82.582 3 0.1510997828660389 0.0007045974986788797 0.002948172125888423 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 9103 17402 AVIKGLTYL True PC9_epitope_Rep4 976.5957180483199 976.59462993586 74.931 2 0.15109775729750716 0.0007045974986788797 0.002948309770754008 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1'] 76797 5958 NRAPNTAEL True PC9_epitope_Rep1 984.4988575413599 984.49776993586 27.732 2 0.151073941790268 0.0007045974986788797 0.002949928602597335 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 75021 14283 NHSDYNMVL True PC9_epitope_Rep3 1091.47059418819 1091.46948993586 60.027 2 0.15107209205000915 0.0007045974986788797 0.0029500543736199368 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 88136 4922 QRSGNVAEL True PC9_epitope_Rep4 972.4988575413598 972.49776993586 25.53 2 0.15107156726728938 0.0007045974986788797 0.002950090056607326 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 7279 9140 ARDPQRYLV True PC9_epitope_Rep5 1116.6039913162401 1116.60288993586 40.102 2 0.15106789739081541 0.0007045974986788797 0.002950339604575377 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'ENST00000485503.1_1_7:55266411-55268235:+|nuORF', 'ENSG00000146648|ENST00000275493|EGFR', 'nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4'] 75776 9448 NLLSVAYK True H1975_Epitope_Rep1 906.5174677276199 906.51636993586 41.257 2 0.15106389196436446 0.0007045974986788797 0.0029506119936069173 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 128766 18334 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 75.309 2 0.15106169375433856 0.0007045974986788797 0.0029507614935283077 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 21509 6825 ERMAGNEAL True PC9_epitope_Rep1 989.4600295044899 989.4589299358599 31.058 2 0.15105339835086126 0.0007045974986788797 0.0029513257305870707 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 74845 9694 NHFMQQTSV True PC9_epitope_Rep1 1090.4865786055 1090.4854899358602 42.144 2 0.1510521786345458 0.0007045974986788797 0.0029514087023578936 ['ENSG00000196639|ENST00000431010|HRH1'] 10078 19987 AYTLLGHEF True PC9_epitope_Rep5 1049.51819600361 1049.5170899358602 81.934 2 0.15104785667759812 0.0007045974986788797 0.00295170272419606 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 108118 19637 SYDPDFNQL True PC9_epitope_Rep3 1097.46655435357 1097.46544993586 80.771 2 0.15104702554764307 0.0007045974986788797 0.0029517592691397096 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 39039 4451 HHSDGSVSL True PC9_epitope_Rep5 937.42535824793 937.42426993586 22.189 2 0.1510468759017216 0.0007045974986788797 0.002951769450237632 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 106892 12215 SVDGVIKEV True PC9_epitope_Rep2 944.51786165044 944.51676993586 52.298 2 0.15104579957213543 0.0007045974986788797 0.00295184267890312 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 27133 10437 FLIVAHDDGR True PC9_epitope_Rep5 1141.58800689893 1141.58635490379 45.133 3 0.15104503946994768 0.0007045974986788797 0.002951894393956662 ['ENSG00000075618|ENST00000382361|FSCN1'] 106167 7284 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4554749679298 32.992 1 0.15104437341103302 0.0007045974986788797 0.0029519397113322407 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 45244 19833 IPTPIVGV True PC9_epitope_Rep3 794.49019035062 794.4896449679301 81.522 1 0.15104364540497958 0.0007045974986788797 0.002951989244265357 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 54874 19591 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 88.02 2 0.15104273354349607 0.0007045974986788797 0.0029520512877385867 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 27999 21310 FQLEHIMDL True PC9_epitope_Rep5 1144.5586809166 1144.55758993586 87.023 2 0.15104231068407215 0.0007045974986788797 0.00295208005972838 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 107103 9127 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 45.211 2 0.1510359807296604 0.0007045974986788797 0.002952510792712397 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 71254 16743 LYPQFMFHL True NCI_RA007_Epitope_Rep3 1194.5895871220598 1194.58848993586 73.7 2 0.15103597859470982 0.0007045974986788797 0.0029525109379994557 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 38710 19260 HGFAGYFETV True PC9_epitope_Rep2 1126.5083595959 1126.5072699358602 79.458 2 0.1510339638157597 0.0007045974986788797 0.002952648050348846 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 18841 12084 ELDPNNAVYY True H1975_Epitope_Rep2 1196.53496826656 1196.5338699358601 51.564 2 0.15103288678036128 0.0007045974986788797 0.0029527213487594915 ['ENSG00000197860|ENST00000381007|SGTB'] 127350 16827 VMSATFAKF True PC9_epitope_Rep1 1000.5051887917599 1000.50408993586 69.549 2 0.15102090950348382 0.0007045974986788797 0.002953536593015602 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 111200 12909 THISDTSVVL True PC9_epitope_Rep2 1070.56078909158 1070.5596899358602 54.951 2 0.151020512427032 0.0007045974986788797 0.0029535636242249675 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 4399 5587 AINVNDSVTK True NCI_RA007_Epitope_Rep2 1059.5560380643099 1059.5549499358601 26.347 2 0.1510197120498955 0.0007045974986788797 0.0029536181111108686 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 106911 7421 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4494699358602 33.548 2 0.1510139050723055 0.0007045974986788797 0.0029540134598894825 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 99285 7359 SHQTGVVAL True PC9_epitope_Rep6 910.4872302284999 910.48612993586 37.49 2 0.15100859192307534 0.0007045974986788797 0.002954375234179239 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 14019 20430 DRFSDIYAL True PC9_epitope_Rep3 1098.53457434374 1098.53346993586 83.837 2 0.15100718021108223 0.0007045974986788797 0.0029544713655893957 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 118959 12689 VADTVARVL True PC9_epitope_Rep5 942.5498304850598 942.54872993586 53.813 2 0.15100717721994633 0.0007045974986788797 0.002954471569275971 ['ENSG00000145632|ENST00000274289|PLK2'] 105133 18431 SRFGKYFEI True PC9_epitope_Rep5 1145.58694426977 1145.58584993586 75.915 2 0.15100579609121614 0.0007045974986788797 0.0029545656211211963 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 42467 6676 IEEDKWRVA True H1975_Epitope_Rep2 1144.5876725457601 1144.58602490379 30.588 3 0.1510047286843018 0.0007045974986788797 0.0029546383112399963 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'STARD4|p.K33M|1|0.13|ENSG00000164211|chr5:111507336-111507336|T/A|missense_variant', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'ENSG00000164211|ENST00000296632|STARD4'] 21385 11581 ERIGETPEL True PC9_epitope_Rep2 1042.5294889632999 1042.52838993586 49.872 2 0.1510028568279442 0.0007045974986788797 0.0029547657884465292 ['ENSG00000168806|ENST00000305641|LCMT2'] 6994 18718 AQLPALWKA True PC9_epitope_Rep1 996.5756513100799 996.57454993586 76.789 2 0.15099989485773452 0.0007045974986788797 0.002954967515805219 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2', 'ENST00000588777.1_1_19:12986806-12989487:-|nuORF'] 72121 15585 M[Oxidation]FLSFPTTK True PC9_epitope_Rep6 1086.54196860374 1086.5408699358602 72.156 2 0.15099911093109258 0.0007045974986788797 0.0029550209080540578 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 28558 9313 FSEQVAM[Oxidation]GY True H1975_Epitope_Rep3 1046.4378974580197 1046.4367899358601 40.817 2 0.15099568946579492 0.0007045974986788797 0.0029552539509629227 ['ENSG00000179051|ENST00000375436|RCC2'] 132314 20118 VTYGFPIML True H1975_Epitope_Rep2 1039.5412399473098 1039.54067496793 83.372 1 0.1509955886275228 0.0007045974986788797 0.0029552608195389037 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF', 'CLCN7|p.N576I|1|0.15|ENSG00000103249|chr16:1449036-1449036|T/A|missense_variant'] 7169 6928 AQYEDIAQKS True PC9_epitope_Rep5 1151.5458673034298 1151.5447699358601 31.618 2 0.1509857963384055 0.0007045974986788797 0.00295592789483412 ['ENSG00000167768|ENST00000252244|KRT1'] 85450 15155 QEYVTFLGA True H1975_Epitope_Rep1 1026.5022115862998 1026.5016749679298 63.553 1 0.150982460487823 0.0007045974986788797 0.00295615517558832 ['ENSG00000197956|ENST00000368719|S100A6'] 108751 20370 SYSHIMALI True PC9_epitope_Rep1 1033.52665251233 1033.52554993586 83.178 2 0.15098169158937785 0.0007045974986788797 0.002956207565240689 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 140794 8570 YSDKYGLGY True H1975_Epitope_Rep1 1064.48147614172 1064.4803699358602 37.891 2 0.1509732922911101 0.0007045974986788797 0.0029567799199249284 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 27964 19701 FQFGVPQAL True PC9_epitope_Rep6 1005.5283667644898 1005.52726993586 88.436 2 0.15097291652281958 0.0007045974986788797 0.0029568055285410073 ['ENSG00000010292|ENST00000315579|NCAPD2'] 100273 12805 SIYNGDMEKI True PC9_epitope_Rep6 1168.5434247752798 1168.5423299358602 60.756 2 0.15096961320440577 0.0007045974986788797 0.00295703065926016 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 128221 13558 VPNKFLVTA True PC9_epitope_Rep5 987.5753169569099 987.57420993586 57.173 2 0.1509686272131151 0.0007045974986788797 0.0029570978607313795 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 116591 5922 TVADHIQKV True PC9_epitope_Rep3 1009.5556441414899 1009.55454993586 27.84 2 0.15096675457997571 0.0007045974986788797 0.002957225496576092 ['ENSG00000181789|ENST00000314797|COPG1'] 134964 11680 WAVPQPTRL True H1975_Epitope_Rep2 1066.59236400338 1066.59126993586 49.999 2 0.15096427529310416 0.0007045974986788797 0.0029573944894637455 ['nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2'] 125060 11678 VIDSAELQAY True H1975_Epitope_Rep1 1107.54480467427 1107.54370993586 49.908 2 0.15096392282857532 0.0007045974986788797 0.0029574185148943124 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 75232 14902 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.48937496793 62.474 1 0.1509636351130625 0.0007045974986788797 0.0029574381269099996 ['ENSG00000116285|ENST00000377482|ERRFI1'] 89031 19693 QVLEDFPTI True PC9_epitope_Rep6 1060.54407639828 1060.54357496793 88.406 1 0.15096303873375286 0.0007045974986788797 0.0029574787792855163 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 34707 7062 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 34.43 2 0.1509599533505784 0.0007045974986788797 0.002957689104248363 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 103947 16599 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51289496793 71.823 1 0.15095751324750803 0.0007045974986788797 0.0029578554521892727 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 142572 19293 YYLNEIQSF True PC9_epitope_Rep6 1175.5498900547097 1175.5487899358602 86.857 2 0.1509560370941787 0.0007045974986788797 0.0029579560897844853 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 114892 9339 TQSEKQFVV True PC9_epitope_Rep5 1064.55022440788 1064.54912993586 40.876 2 0.1509505652806347 0.0007045974986788797 0.0029583291635455443 ['ENSG00000163902|ENST00000296255|RPN1'] 57589 4644 LEDVSKPPA True H1975_Epitope_Rep3 954.5022115863 954.50110993586 22.984 2 0.15094600118995724 0.0007045974986788797 0.002958640383695289 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 98065 8625 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 38.133 1 0.15092742223032443 0.0007045974986788797 0.002959907598395928 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 49020 11359 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 50.344 2 0.15092323676586783 0.0007045974986788797 0.0029601931508807006 ['ENSG00000197747|ENST00000368811|S100A10'] 139089 8656 YLDESKQLY True H1975_Epitope_Rep1 1157.56045473841 1157.5593499358602 38.224 2 0.1509219573680234 0.0007045974986788797 0.0029602804430208626 ['ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B'] 140023 10827 YQEELSREL True PC9_epitope_Rep6 1165.5615173675699 1165.5604299358602 52.498 2 0.15091068696250068 0.0007045974986788797 0.002961049523218272 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 53891 9744 KTLTGKTITL True PC9_epitope_Rep1 1074.6648602373 1074.66376993586 42.34 2 0.15090660259202066 0.0007045974986788797 0.002961328285335605 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 104354 17243 SQISDTSVVL True PC9_epitope_Rep4 1047.5448046742702 1047.54370993586 74.333 2 0.15090510200889307 0.0007045974986788797 0.002961430708107378 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 95815 9879 RYIPTAAAF True NCI_RA007_Epitope_Rep5 1008.5392658013599 1008.53816993586 44.644 2 0.15090416725181469 0.0007045974986788797 0.0029614945120282473 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 137897 11909 YEWVNPAA True H1975_Epitope_Rep1 948.4341320264798 948.4335849679301 50.809 1 0.15090296371101816 0.0007045974986788797 0.002961576664395133 ['ENSG00000092148|ENST00000399332|HECTD1'] 95690 16520 RYFKGPELL True PC9_epitope_Rep1 1121.6233297784897 1121.62222993586 68.368 2 0.1508966043478831 0.0007045974986788797 0.002962010785189445 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 48469 7081 KADPSHFEL True NCI_RA007_Epitope_Rep3 1042.5083595959 1042.5072699358602 34.97 2 0.15089443236781422 0.0007045974986788797 0.002962159069542283 ['nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENST00000524436.5_1_1:26856411-26877988:+|nuORF', 'ENST00000530607.1_1_1:26872355-26877988:+|nuORF'] 96414 11691 SAAFPGASL True NCI_RA007_Epitope_Rep3 819.41266830591 819.41211496793 53.101 1 0.15088888610348314 0.0007045974986788797 0.0029625377549133284 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 115853 7944 TSDYVSQSY True H1975_Epitope_Rep2 1048.43491987212 1048.43437496793 35.504 1 0.15088200965638857 0.0007045974986788797 0.0029630073288618116 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 35860 5075 GTMKAQGVLLK True NCI_RA007_Epitope_Rep3 1144.6638146914797 1144.66216490379 26.955 3 0.1508718012809961 0.0007045974986788797 0.0029637045678829813 ['nc|ENSG00000166482|P55083-2|MFAP4'] 77538 10935 NTDLGNDLY True H1975_Epitope_Rep1 1023.4509042894299 1023.4503749679301 47.025 1 0.1508712591019252 0.0007045974986788797 0.0029637416036538936 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 65362 8949 LRDQSAVVV True PC9_epitope_Rep1 985.5556441414899 985.55454993586 39.265 2 0.15086599488048816 0.0007045974986788797 0.002964101221911907 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 135420 16549 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.55560993586 68.66 2 0.15086061443695958 0.0007045974986788797 0.0029644688246365236 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 22889 19505 EVDPSDWIGLY True H1975_Epitope_Rep3 1292.5924831426798 1292.5913899358602 81.74 2 0.1508570795394353 0.0007045974986788797 0.0029647103606602293 ['ENSG00000138411|ENST00000644978|HECW2'] 96164 13683 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65458993586 60.521 2 0.1508499084179652 0.0007045974986788797 0.002965200416455777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 54577 21039 KYITDWQNVF True PC9_epitope_Rep1 1312.6451874218799 1312.6440899358602 85.756 2 0.1508494852590106 0.0007045974986788797 0.0029652293365591315 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 98881 8335 SGVSLAALK True NCI_RA007_Epitope_Rep5 844.50181766348 844.50072993586 38.735 2 0.15084749286768276 0.0007045974986788797 0.00296536550704551 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 133805 11652 VYFSKSEQL True PC9_epitope_Rep2 1099.5549754351498 1099.5538699358601 50.149 2 0.15083145170935425 0.0007045974986788797 0.002966462070996962 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant'] 35933 10348 GTSSLFIYK True NCI_RA007_Epitope_Rep4 1014.53859709502 1014.53750993586 46.659 2 0.15082064287170552 0.0007045974986788797 0.002967201184385089 ['ENSG00000179941|ENST00000650064|BBS10'] 5293 7317 ALQEM[Oxidation]VHQV True PC9_epitope_Rep5 1069.52263014149 1069.5215299358601 33.106 2 0.15081856475878452 0.0007045974986788797 0.002967343307740869 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 40339 13318 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5445349679301 56.24 1 0.15081493866736692 0.0007045974986788797 0.0029675913144861514 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 65894 10183 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 44.171 1 0.15081248519760082 0.0007045974986788797 0.002967759131411008 ['ENSG00000182108|ENST00000331808|DEXI'] 134604 18437 VYSKDNPNLLF True PC9_epitope_Rep1 1308.67140216972 1308.6703099358601 75.708 2 0.15080688007022777 0.0007045974986788797 0.0029681425566555055 ['ENSG00000174231|ENST00000304992|PRPF8'] 76062 7558 NMEADPGQY True H1975_Epitope_Rep2 1023.3967605415899 1023.3956699358599 34.025 2 0.15080623008553815 0.0007045974986788797 0.0029681870228049057 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 70797 10940 LYAPYSTHF True NCI_RA007_Epitope_Rep4 1097.51819600361 1097.5170899358602 48.944 2 0.15080451233291536 0.0007045974986788797 0.0029683045392967958 ['ENSG00000013588|ENST00000014914|GPRC5A'] 22449 7226 ETETFPSKY True H1975_Epitope_Rep3 1100.5026055091198 1100.5015099358602 32.766 2 0.15079630197573554 0.0007045974986788797 0.002968866297905948 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2'] 21930 11666 ESDVGVVVY True H1975_Epitope_Rep2 965.47057710485 965.47002496793 49.945 1 0.1507908969965482 0.0007045974986788797 0.0029692361683067866 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 95802 19304 RYINNPLLI True PC9_epitope_Rep2 1114.6498788795 1114.6487899358601 79.627 2 0.1507797746310899 0.0007045974986788797 0.002969997431960484 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 40421 11536 HQYDGLVEL True NCI_RA007_Epitope_Rep4 1072.5189242795998 1072.5178299358602 51.321 2 0.1507777660701354 0.0007045974986788797 0.00297013492743375 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 109144 15648 TAMDVVYAL True NCI_RA007_Epitope_Rep3 981.4841189940099 981.48302993586 69.167 2 0.15077168082251147 0.0007045974986788797 0.002970551530041098 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 17854 19930 EHVFWVVSL True PC9_epitope_Rep6 1114.5811306133398 1114.58002993586 89.32 2 0.15075749952495826 0.0007045974986788797 0.0029715226228044698 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 92873 10963 RPFQGTMGV True PC9_epitope_Rep2 991.4909357099498 991.48982993586 47.491 2 0.15075391174050093 0.0007045974986788797 0.0029717683536415597 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 107209 12697 SVIPQIQKV True PC9_epitope_Rep6 1010.6124307416198 1010.61132993586 60.315 2 0.15074651034718428 0.0007045974986788797 0.0029722753461885426 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 73435 14271 M[Oxidation]VADKFTEL True PC9_epitope_Rep5 1068.51614777872 1068.5150499358601 59.897 2 0.15074572247672813 0.0007045974986788797 0.002972329320079254 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 28858 15009 FTDAGLKEL True PC9_epitope_Rep5 992.51786165044 992.51676993586 62.735 2 0.1507438934991299 0.0007045974986788797 0.002972454619868232 ['ENSG00000136261|ENST00000258761|BZW2'] 10092 17916 AYTPFHAVL True PC9_epitope_Rep2 1017.5283667644899 1017.52726993586 74.218 2 0.15074045634386785 0.0007045974986788797 0.0029726901070935728 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 30312 7634 GAAKDLPGV True PC9_epitope_Rep2 826.4548674710599 826.45376993586 34.733 2 0.15073787008404793 0.0007045974986788797 0.0029728673098112298 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 91519 18409 RIADSFQVI True PC9_epitope_Rep5 1047.57129420563 1047.57018993586 75.831 2 0.1507304130897009 0.0007045974986788797 0.0029733782994564016 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 26287 12420 FHGISPGL True PC9_epitope_Rep4 826.43373810366 826.43264993586 55.578 2 0.15072063008006523 0.0007045974986788797 0.002974048811678438 ['ENSG00000174282|ENST00000380599|ZBTB4'] 87779 14305 QRDFNSELL True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 60.288 2 0.1507149180204372 0.0007045974986788797 0.002974440376964238 ['ENSG00000042429|ENST00000251871|MED17', 'MED17|p.C601*|1|0.39|ENSG00000042429|chr11:93811909-93811910|TG/-|frameshift_variant', 'MED17|p.H347Ifs*25|1|0.19|ENSG00000042429|chr11:93796435-93796435|C/-|frameshift_variant'] 55817 6195 LAPEYEAAATR True NCI_RA007_Epitope_Rep5 1190.59315184902 1190.5920499358601 30.508 2 0.15071360325410277 0.0007045974986788797 0.0029745305122934463 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 45541 7621 IQRQETISL True NCI_RA007_Epitope_Rep3 1086.6033226099 1086.6022299358601 37.105 2 0.15070822798575986 0.0007045974986788797 0.002974899048337638 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 25751 10383 FETAVAPNV True H1975_Epitope_Rep1 946.4759968384599 946.47488993586 44.887 2 0.15069925755972344 0.0007045974986788797 0.00297551417477693 ['ENSG00000157933|ENST00000378536|SKI'] 99018 17186 SHDYSLYSL True PC9_epitope_Rep2 1083.48728979815 1083.48618993586 71.364 2 0.1506956957626932 0.0007045974986788797 0.0029757584519898446 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136'] 75209 12125 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.4842749679299 51.722 1 0.15069479361528326 0.0007045974986788797 0.0029758203267523614 ['ENSG00000116285|ENST00000377482|ERRFI1'] 25994 19163 FGFEITHEV True PC9_epitope_Rep2 1077.51311062317 1077.51200993586 79.084 2 0.15069389547209192 0.0007045974986788797 0.002975881928153962 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 99771 19496 SIIQRLLEV True PC9_epitope_Rep6 1069.64954452633 1069.64844993586 87.653 2 0.15068588575241715 0.0007045974986788797 0.002976431351018438 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 65346 18350 LRDGQILEL True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 75.6 2 0.1506810050950542 0.0007045974986788797 0.002976766186892013 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 54300 8078 KYAHMINGF True NCI_RA007_Epitope_Rep4 1079.52223583823 1079.52112993586 37.853 2 0.1506738240197269 0.0007045974986788797 0.0029772589103773573 ['ENSG00000035687|ENST00000366535|ADSS2'] 2549 13051 AEQPYFIEA True H1975_Epitope_Rep2 1066.49712620586 1066.49657496793 55.322 1 0.15066831034970696 0.0007045974986788797 0.0029776372813625856 ['ENSG00000123607|ENST00000243344|TTC21B'] 7502 12889 ASDLSQPDLVY True H1975_Epitope_Rep2 1206.57683307854 1206.5757299358602 54.69 2 0.15066365862453762 0.0007045974986788797 0.0029779565393487552 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 104897 12101 SRDDNM[Oxidation]FQI True PC9_epitope_Rep2 1140.48697290876 1140.4858699358601 51.856 2 0.1506555533871557 0.0007045974986788797 0.0029785129008175057 ['ENSG00000113387|ENST00000265073|SUB1'] 54530 19893 KYIESPVLF True PC9_epitope_Rep5 1094.60119735158 1094.60010993586 81.57 2 0.15065144984317555 0.0007045974986788797 0.0029787946166464734 ['ENSG00000100304|ENST00000216129|TTLL12'] 137171 9376 YAYDGKDYL True NCI_RA007_Epitope_Rep4 1106.4920408254197 1106.49147496793 42.92 1 0.15065143677067244 0.0007045974986788797 0.0029787955141402163 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 132765 21031 VVISSDGQFAL True PC9_epitope_Rep1 1134.5920892198599 1134.59098993586 85.724 2 0.15064856892904444 0.0007045974986788797 0.002978992412545622 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 71433 16863 LYTEKFEEF True PC9_epitope_Rep4 1204.5652057656796 1204.5641099358602 72.844 2 0.15064607682490613 0.0007045974986788797 0.002979163524336255 ['ENSG00000084652|ENST00000373610|TXLNA'] 17550 19187 EHGNFLITV True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 78.842 2 0.15064056533172346 0.0007045974986788797 0.0029795419868905936 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 15058 15076 DYQALRTSI True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 62.997 2 0.1506385618944573 0.0007045974986788797 0.0029796795705464493 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 70004 9763 LVLVGDGGTGK True PC9_epitope_Rep2 1014.57095985246 1014.56986993586 42.892 2 0.15063853388635942 0.0007045974986788797 0.0029796814940138837 ['ENSG00000132341|ENST00000543796|RAN'] 4140 8552 AHTAEVNCL True PC9_epitope_Rep1 956.43856578392 956.43746993586 37.732 2 0.15063488406814032 0.0007045974986788797 0.002979932157334396 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 49074 5650 KEIEELQSQA True H1975_Epitope_Rep2 1173.58773211541 1173.5866299358602 26.731 2 0.15063194353178344 0.0007045974986788797 0.0029801341236554762 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 4105 18962 AHSDTLFTI True PC9_epitope_Rep3 1003.4974605590301 1003.49636993586 78.162 2 0.15063155909743514 0.0007045974986788797 0.0029801605289585986 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 6719 7071 AQAPDLQRV True PC9_epitope_Rep6 996.5352430500799 996.53414993586 36.225 2 0.15063146785744558 0.0007045974986788797 0.002980166795913528 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 114720 16360 TQILSVPKV True PC9_epitope_Rep1 983.6015317047498 983.60042993586 67.749 2 0.15062827206747884 0.0007045974986788797 0.00298038631180036 ['nc|ENSG00000120802|P42166|TMPO'] 94915 18382 RTFDETVSTYV True PC9_epitope_Rep3 1316.62484590012 1316.6237499358601 75.914 2 0.15062775155179142 0.0007045974986788797 0.002980422067071318 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 28118 19239 FRADDTFEAL True PC9_epitope_Rep3 1183.55095268387 1183.54984993586 79.223 2 0.15062615329418946 0.0007045974986788797 0.0029805318572747497 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 95107 9459 RVDPAKGLFY True H1975_Epitope_Rep1 1164.6291434349198 1164.6280499358602 41.301 2 0.15062483565365306 0.0007045974986788797 0.0029806223738870394 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 76043 14480 NMDNMFESY True H1975_Epitope_Rep3 1149.41069635357 1149.4101749679298 61.056 1 0.15061798798337278 0.0007045974986788797 0.0029810928254142338 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 58559 9409 LEQLRPVTV True H1975_Epitope_Rep2 1053.61824439805 1053.6171499358602 41.159 2 0.15060930615328172 0.0007045974986788797 0.0029816893944746427 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENST00000470686.1_1_X:17156958-17165601:+|nuORF', 'ENST00000469714.1_1_X:17092694-17165601:+|nuORF'] 98859 6039 SGTSEFLNK True PC9_epitope_Rep6 981.4767251144499 981.47562993586 31.583 2 0.15059637838212134 0.0007045974986788797 0.002982577942294774 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 115481 10031 TRNPVSEEL True PC9_epitope_Rep1 1043.52473793603 1043.52364993586 43.452 2 0.15059246061721449 0.0007045974986788797 0.0029828472690384797 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 32817 6780 GHLEKAVVL True NCI_RA007_Epitope_Rep4 964.5705659296399 964.56946993586 32.7 2 0.15059234019048015 0.0007045974986788797 0.0029828555481578537 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 142152 10142 YVSGELEHV True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 44.35 2 0.1505899524407444 0.0007045974986788797 0.002983019706342911 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 73302 18254 M[Oxidation]TDPIRILV True PC9_epitope_Rep4 1072.5950668057599 1072.59396993586 78.286 2 0.15058429711096855 0.0007045974986788797 0.002983408547080837 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 28923 5169 FTDKSAEDY True H1975_Epitope_Rep3 1074.4505699362599 1074.4494699358602 24.983 2 0.15057864144555555 0.0007045974986788797 0.0029837974613769244 ['ENST00000533568.5_1_11:77069900-77103583:-|nuORF', 'ENSG00000149269|ENST00000356341|PAK1', 'nc|ENSG00000149269|Q13153-2|PAK1'] 73204 20151 MRYVASYLL True PC9_epitope_Rep5 1114.5845017416198 1114.5834099358601 82.559 2 0.15057194232347068 0.0007045974986788797 0.0029842581947469053 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 140739 14024 YSDDIPHAL True PC9_epitope_Rep2 1029.47672511445 1029.47562993586 59.221 2 0.15057102795456126 0.0007045974986788797 0.0029843210861338503 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 17100 13240 EGLPVALDK True PC9_epitope_Rep1 940.5229470308799 940.52184993586 55.794 2 0.15056364884401663 0.0007045974986788797 0.002984828678490317 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 122222 11897 VGAPKIPSV True PC9_epitope_Rep4 866.5225531080599 866.52144993586 53.538 2 0.15056056714917965 0.0007045974986788797 0.00298504068677126 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 99313 19655 SHSFVVNIL True PC9_epitope_Rep2 1014.5498304850599 1014.54872993586 80.988 2 0.15055492834990558 0.0007045974986788797 0.00298542865243641 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 108837 5622 SYVTTSTRTYS True NCI_RA007_Epitope_Rep5 1264.5935457718401 1264.59244993586 28.315 2 0.1505529011360717 0.0007045974986788797 0.00298556814287046 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 115191 7568 TRDPQVNAF True PC9_epitope_Rep6 1046.5145076054998 1046.5134099358602 38.384 2 0.15054774153344536 0.0007045974986788797 0.002985923198938209 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 54490 19720 KYIDFDHVF True PC9_epitope_Rep3 1182.57095985246 1182.5693249037902 81.081 3 0.15054721477015112 0.0007045974986788797 0.002985959450317008 ['ENSG00000007545|ENST00000397412|CRAMP1'] 104821 12541 SRAEDYEVL True PC9_epitope_Rep5 1080.50875351872 1080.5076499358602 53.238 2 0.15054474809330073 0.0007045974986788797 0.0029861292106434707 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 133983 7367 VYISEHEHF True NCI_RA007_Epitope_Rep2 1159.5298233164701 1159.5281849037901 33.28 3 0.1505424411633623 0.0007045974986788797 0.0029862879856504504 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 2743 10099 AETHYTYFP True H1975_Epitope_Rep2 1127.49237517859 1127.4912699358601 43.84 2 0.15053802690913895 0.0007045974986788797 0.0029865918211921835 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF', 'nc|ENSG00000158773|P22415-2|USF1'] 136837 14763 YADGESFLGY True H1975_Epitope_Rep2 1120.4713053808398 1120.4707749679299 61.944 1 0.15053586433199864 0.0007045974986788797 0.0029867406837991283 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 75151 6771 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59691490379 31.451 3 0.15052875154397513 0.0007045974986788797 0.002987230349976188 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 114520 11786 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.47578496793 50.667 1 0.15052768383045664 0.0007045974986788797 0.002987303861555483 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 107747 5619 SVSNVVITK True NCI_RA007_Epitope_Rep4 945.54949613189 945.54838993586 28.214 2 0.15052684256907445 0.0007045974986788797 0.002987361783279383 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 93354 13178 RPYEPINSI True PC9_epitope_Rep5 1087.56620882519 1087.5651099358602 55.695 2 0.1505180616928501 0.0007045974986788797 0.002987966422532512 ['ENSG00000115207|ENST00000264720|GTF3C2'] 7521 7827 ASDPYQVHV True H1975_Epitope_Rep2 1014.4770594676198 1014.47596993586 35.056 2 0.15051511500770312 0.0007045974986788797 0.002988169354593198 ['ENSG00000047315|ENST00000314595|POLR2B'] 134922 12423 VYWDSAGAAHF True NCI_RA007_Epitope_Rep5 1222.5407223533396 1222.5396299358601 54.443 2 0.15051111794359806 0.0007045974986788797 0.0029884446459981103 ['ENSG00000136213|ENST00000618655|CHST12'] 30594 17926 GAIPRLVQL True PC9_epitope_Rep4 965.6022004110898 965.60110993586 77.0 2 0.15050643355730067 0.0007045974986788797 0.0029887673077653573 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 42521 12414 IEENSNVILP True H1975_Epitope_Rep2 1126.58700383942 1126.5859099358602 52.836 2 0.1505042809202346 0.0007045974986788797 0.002988915593609972 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000417282.1_1_7:56372411-56373020:-|nuORF'] 72221 19904 MHDFNLISI True PC9_epitope_Rep4 1088.53246616876 1088.53136993586 84.695 2 0.15049290293073073 0.0007045974986788797 0.002989699495743047 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 97587 7908 SEETPLTAA True H1975_Epitope_Rep2 917.4341915961298 917.43364496793 35.366 1 0.15049279068284022 0.0007045974986788797 0.0029897072302346086 ['ENSG00000182154|ENST00000371443|MRPL41'] 78687 18131 NYYKVNWTF True PC9_epitope_Rep6 1233.5818588893296 1233.5807699358602 82.376 2 0.15048785386656016 0.0007045974986788797 0.0029900474234998945 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 111062 15071 THDITTISI True PC9_epitope_Rep2 999.52367530687 999.52256993586 63.229 2 0.15048007600647784 0.0007045974986788797 0.0029905834697235784 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 22220 9741 ESYSIYVYK True H1975_Epitope_Rep1 1150.55464108198 1150.55354993586 42.398 2 0.15047589338796358 0.0007045974986788797 0.0029908717732661165 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 54262 15796 KWNPTAGVAF True PC9_epitope_Rep6 1089.56072952193 1089.5596299358601 73.015 2 0.1504747821331449 0.0007045974986788797 0.00299094837555809 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 108227 23030 SYIALPLTL True PC9_epitope_Rep3 989.57973363101 989.57862993586 93.853 2 0.15046314941212507 0.0007045974986788797 0.002991750372910634 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 93522 9020 RQLEDTVAL True NCI_RA007_Epitope_Rep4 1043.56112344475 1043.56002993586 41.528 2 0.1504591098854287 0.0007045974986788797 0.002992028921017237 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 8585 14299 [Acetylation]-ATVQQLEGR True PC9_epitope_Rep3 1042.54072266964 1042.5396299358601 60.088 2 0.150455183681654 0.0007045974986788797 0.0029922996796197527 ['ENSG00000164687|ENST00000297258|FABP5'] 130227 9697 VSEYISSDGSY True H1975_Epitope_Rep3 1205.5088130883698 1205.50770993586 42.321 2 0.15045342044012794 0.0007045974986788797 0.0029924212841033475 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12'] 142568 20444 YYLNEIQSF True PC9_epitope_Rep4 1175.5498900547097 1175.5487899358602 86.782 2 0.15045249652562692 0.0007045974986788797 0.0029924850051584193 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 8907 8536 AVFPSIVGRPR True NCI_RA007_Epitope_Rep3 1197.69822605425 1197.6965849037902 40.65 3 0.15045221745978193 0.0007045974986788797 0.0029925042521943136 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 54968 8073 KYQEVTNNL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 36.412 2 0.15044855015000125 0.0007045974986788797 0.0029927571962249204 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 135080 7056 WEDEGVRAC True H1975_Epitope_Rep1 1063.4392940599098 1063.43818993586 32.173 2 0.15044822618574774 0.0007045974986788797 0.00299277954191761 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 28196 15571 FREDSTLAL True PC9_epitope_Rep3 1050.53457434374 1050.53346993586 65.043 2 0.15044480070800884 0.0007045974986788797 0.0029930158271423164 ['ENSG00000197077|ENST00000358431|KIAA1671'] 108554 17980 SYNGKLYVF True PC9_epitope_Rep5 1089.54949613189 1089.54838993586 74.178 2 0.15043617038336643 0.0007045974986788797 0.002993611218645006 ['ENSG00000174010|ENST00000328046|KLHL15'] 19447 6237 ELNITAAK True NCI_RA007_Epitope_Rep2 858.4810822188999 858.47998993586 28.867 2 0.1504325860408944 0.0007045974986788797 0.0029938585310336336 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 116249 19514 TTDFIFNLY True H1975_Epitope_Rep3 1132.54407639828 1132.54357496793 81.776 1 0.15042631471260523 0.0007045974986788797 0.002994291288956402 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 8133 13661 ATEFIMNEY True H1975_Epitope_Rep3 1116.47976188956 1116.47917496793 57.838 1 0.15042274411306708 0.0007045974986788797 0.002994537708804452 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 107313 16876 SVLDVDGMKV True PC9_epitope_Rep6 1061.54269649929 1061.5415899358602 77.431 2 0.1504188826301546 0.0007045974986788797 0.002994804226284095 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 114894 9903 TQSEKQLVL True PC9_epitope_Rep5 1044.58152453616 1044.5804299358601 43.063 2 0.15041743475590702 0.0007045974986788797 0.002994904163876819 ['PODXL|p.G363Efs*14|1|0.12|ENSG00000128567|chr7:131508964-131508964|C/-|frameshift_variant', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENSG00000128567|ENST00000378555|PODXL', 'ENST00000446198.5_1_7:131189072-131193853:-|nuORF'] 106108 11978 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 51.08 2 0.1504120447739809 0.0007045974986788797 0.00299527622939876 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 115331 15119 TRIGLETSL True PC9_epitope_Rep3 988.55530978832 988.55420993586 63.292 2 0.15040870860132302 0.0007045974986788797 0.0029955065454072075 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 43033 4831 IETNHNLPP True H1975_Epitope_Rep3 1033.5192586327698 1033.5181699358602 23.708 2 0.15040457103924948 0.0007045974986788797 0.0029957922106322826 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 6835 17371 AQFEHTILL True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 74.82 2 0.15040078650463184 0.0007045974986788797 0.0029960535259190586 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 16343 7221 EEIDISKAA True H1975_Epitope_Rep3 974.49204082542 974.49094993586 32.747 2 0.15039921639326528 0.0007045974986788797 0.002996161945937663 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 14633 14611 DVDLEFLAK True NCI_RA007_Epitope_Rep1 1048.54407639828 1048.5429699358601 60.885 2 0.15039613826351475 0.0007045974986788797 0.0029963745096408573 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 141163 7231 YSTEPNNL True H1975_Epitope_Rep3 936.41887588516 936.41776993586 32.786 2 0.15039516887836363 0.0007045974986788797 0.002996441454729265 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 54376 10970 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.53333490379 49.968 3 0.1503906594611646 0.0007045974986788797 0.002996752891636468 ['ENSG00000123975|ENST00000314355|CKS2'] 99332 9918 SHSSFQASL True PC9_epitope_Rep1 962.44575933934 962.44466993586 43.009 2 0.15039003500118223 0.0007045974986788797 0.002996796021676236 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 2550 12946 AEQPYFIEA True H1975_Epitope_Rep3 1066.49712620586 1066.49657496793 55.027 1 0.15038425499680075 0.0007045974986788797 0.002997195262857139 ['ENSG00000123607|ENST00000243344|TTC21B'] 142107 14143 YVPETVYRV True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 59.412 2 0.15037815799082954 0.0007045974986788797 0.002997616457631798 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 78153 16224 NYAQVFNKL True PC9_epitope_Rep4 1095.57129420563 1095.57018993586 70.348 2 0.15037250730742158 0.0007045974986788797 0.0029980068720749293 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 48354 13028 IYSTKLYRF True PC9_epitope_Rep2 1189.6495445263297 1189.64788490379 55.393 3 0.15037033400804242 0.0007045974986788797 0.0029981570421670775 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 128792 16110 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 74.306 2 0.15036517655761836 0.0007045974986788797 0.00299851344035473 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 77667 9020 NTIDPSHPM True PC9_epitope_Rep3 1010.4491304676201 1010.44802993586 39.639 2 0.15035923985958632 0.0007045974986788797 0.002998923739557099 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 1580 9376 AEEVWARVA True H1975_Epitope_Rep3 1029.5243440132097 1029.5232499358601 41.065 2 0.15035149617991259 0.0007045974986788797 0.0029994590075441063 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 124779 8186 VHDPAGALQAA True PC9_epitope_Rep4 1048.5301576696397 1048.5290699358602 38.947 2 0.1503509291503728 0.0007045974986788797 0.0029994982061833583 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 90658 8261 REQDLPLAEA True H1975_Epitope_Rep2 1140.5775017848798 1140.57640993586 36.727 2 0.15034986682187912 0.0007045974986788797 0.002999571646113824 ['ENSG00000169895|ENST00000380155|SYAP1'] 77385 9536 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.4600299358601 41.652 2 0.15033650445201577 0.0007045974986788797 0.003000495554273899 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 89176 6674 QVSDDLTER True PC9_epitope_Rep3 1061.4989171110099 1061.4978299358602 30.695 2 0.15032865795650702 0.0007045974986788797 0.0030010382129339844 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF'] 35947 6249 GTTAVFINK True NCI_RA007_Epitope_Rep5 949.5232813840499 949.52218993586 30.714 2 0.1503235202854623 0.0007045974986788797 0.003001393583952893 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.S538Lfs*13|1|0.1|ENSG00000116539|chr1:155481257-155481257|G/-|frameshift_variant'] 17102 13321 EGLPVALDK True PC9_epitope_Rep3 940.5229470308799 940.52184993586 56.273 2 0.1503232898884318 0.0007045974986788797 0.003001409521421504 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 115703 8905 TSALPIIQK True NCI_RA007_Epitope_Rep2 969.58588164061 969.5853349679301 39.265 1 0.15032179267718596 0.0007045974986788797 0.0030015130914641626 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 28729 8254 FSSDDSKLEY True H1975_Epitope_Rep2 1189.5138984688099 1189.51280993586 36.703 2 0.15032121949795246 0.0007045974986788797 0.003001552742253709 ['ENSG00000114331|ENST00000326793|ACAP2'] 40961 8257 HTDGNNIYV True PC9_epitope_Rep1 1031.4672230599099 1031.4661299358602 36.595 2 0.1503185934050405 0.0007045974986788797 0.0030017344140136066 ['ZNF800|p.I552*|1|0.23|ENSG00000048405|chr7:127373686-127373686|C/-|frameshift_variant', 'ENSG00000048405|ENST00000265827|ZNF800'] 133918 18162 VYIHPSSALF True PC9_epitope_Rep2 1132.59169529704 1132.5905899358602 75.164 2 0.15031700342078785 0.0007045974986788797 0.003001844413629714 ['ENSG00000067596|ENST00000262415|DHX8'] 21724 10312 ERSPVIQTL True PC9_epitope_Rep6 1041.58185888933 1041.5807699358602 50.363 2 0.1503109165096648 0.0007045974986788797 0.0030022655604875137 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 63563 16050 LMDHTIPEV True PC9_epitope_Rep3 1053.51648175145 1053.5153899358602 66.888 2 0.15030927616092868 0.0007045974986788797 0.0030023790645224866 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 5065 19853 ALLDRIVSV True PC9_epitope_Rep2 984.59678067748 984.59568993586 81.756 2 0.1503046485403337 0.0007045974986788797 0.003002699296054953 ['ENSG00000155561|ENST00000285968|NUP205'] 85877 17829 QHFDTIYSI True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 73.876 2 0.15030100907445773 0.0007045974986788797 0.0030029511711332927 ['ENSG00000010292|ENST00000315579|NCAPD2'] 47613 17751 IVWQEDPRL True PC9_epitope_Rep5 1154.6084079903396 1154.60730993586 73.298 2 0.15029769013992544 0.0007045974986788797 0.0030031808816661475 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 114577 16057 TQDGNIYQL True PC9_epitope_Rep4 1050.4981888350198 1050.49708993586 69.698 2 0.1502921608745169 0.0007045974986788797 0.0030035636127671013 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 26936 17471 FLDPRPLTV True PC9_epitope_Rep4 1056.59678067748 1056.59568993586 75.2 2 0.15029023530461275 0.0007045974986788797 0.003003696910498275 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 2495 4011 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 20.499 2 0.15028870718708923 0.0007045974986788797 0.0030038026987488004 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 9027 12622 AVHDSFVAV True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 53.421 2 0.15028614483051714 0.0007045974986788797 0.0030039800934440245 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 115166 19707 TRDPLVLEL True PC9_epitope_Rep2 1054.60225998074 1054.60116993586 81.19 2 0.15028213299319626 0.0007045974986788797 0.003004257858199877 ['FKBP11|p.I85L|1|0.28|ENSG00000134285|chr12:48924591-48924591|T/A|missense_variant'] 128783 18033 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 74.379 2 0.15028169528222815 0.0007045974986788797 0.003004288165233322 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 106322 6153 STFSTNYR True PC9_epitope_Rep2 974.4457593393399 974.44466993586 29.059 2 0.1502795401626799 0.0007045974986788797 0.0030044373897862003 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 35176 5462 GQYGNPLNK True NCI_RA007_Epitope_Rep4 989.4930438849299 989.49194993586 27.592 2 0.1502773197620043 0.0007045974986788797 0.003004591142247111 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 135392 21104 WHDSDWIL True PC9_epitope_Rep1 1070.48214484806 1070.48104993586 86.004 2 0.15027575689152864 0.0007045974986788797 0.003004699368485813 ['ENSG00000107625|ENST00000373585|DDX50'] 12228 7991 DIIPNPQER True H1975_Epitope_Rep1 1080.5563724174801 1080.55526993586 35.688 2 0.15027256671733633 0.0007045974986788797 0.00300492029490925 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 102896 14314 SPAPPLLHV True PC9_epitope_Rep4 929.53345214493 929.53234993586 62.962 2 0.15026358355432692 0.0007045974986788797 0.0030055424851712547 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 108511 16778 SYM[Oxidation]GHFDLL True PC9_epitope_Rep6 1097.48518200361 1097.48408993586 77.035 2 0.15026034024845805 0.0007045974986788797 0.003005767153970901 ['ENSG00000169976|ENST00000367569|SF3B5'] 137453 12503 YEDRVTFLP True H1975_Epitope_Rep2 1138.56587447202 1138.56476993586 53.184 2 0.15026005549665078 0.0007045974986788797 0.0030057868799663037 ['ENSG00000158769|ENST00000368026|F11R'] 86323 15411 QITVNDLPVGR True PC9_epitope_Rep3 1210.6669854956199 1210.6658899358602 64.433 2 0.15025695342543136 0.0007045974986788797 0.003006001782274695 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 113948 7535 TPAEPYARV True PC9_epitope_Rep4 1002.5134449763399 1002.51234993586 36.352 2 0.15025571290381048 0.0007045974986788797 0.0030060877262216134 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A'] 39448 12260 HLAEVLERV True PC9_epitope_Rep4 1064.59784330664 1064.59674993586 54.976 2 0.15025405057682817 0.0007045974986788797 0.0030062028968871825 ['ENSG00000155827|ENST00000389120|RNF20', 'RNF20|p.Q440Sfs*14|1|0.08|ENSG00000155827|chr9:101551726-101551727|-/T|frameshift_variant'] 114830 7838 TQLQTTQSV True PC9_epitope_Rep2 1004.5138388991599 1004.51274993586 35.519 2 0.1502478179556943 0.0007045974986788797 0.0030066347494424072 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 103806 12356 SPVYVGRVV True PC9_epitope_Rep5 974.5549158654999 974.55380993586 52.523 2 0.15024172767084046 0.0007045974986788797 0.0030070567993214703 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 118656 13293 TYSPALNKM[Oxidation]F True PC9_epitope_Rep5 1186.5692459807399 1186.5681499358602 56.143 2 0.1502363451737185 0.0007045974986788797 0.003007429849414459 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 18789 11358 ELDENLEY True H1975_Epitope_Rep2 1023.43967089939 1023.4385699358601 48.737 2 0.15023568998258385 0.0007045974986788797 0.0030074752625455204 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 77193 6564 NRSEVQANL True PC9_epitope_Rep3 1029.52032126193 1029.51922993586 30.273 2 0.1502347504578105 0.0007045974986788797 0.00300754038482839 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 137230 16014 YAYTGVLQL True H1975_Epitope_Rep2 1026.53859709502 1026.53750993586 66.797 2 0.15023414431219434 0.0007045974986788797 0.0030075823999912627 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 133999 10250 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5281849037901 44.31 3 0.15023357615603825 0.0007045974986788797 0.003007621782434109 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 128765 18236 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 74.936 2 0.15023265943571343 0.0007045974986788797 0.0030076853271137427 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 132198 17292 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 71.33 2 0.15022992533133572 0.0007045974986788797 0.003007874856090344 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 121388 5682 VEVQDTPNA True H1975_Epitope_Rep2 971.45598966987 971.45488993586 26.854 2 0.15022307632614712 0.0007045974986788797 0.0030083496834967527 ['nc|ENSG00000178057|Q9BU61-2|NDUFAF3', 'ENSG00000178057|ENST00000326925|NDUFAF3'] 36006 21329 GTYDIFYTA True PC9_epitope_Rep1 1049.47057710485 1049.47007496793 86.872 1 0.15021179187899406 0.0007045974986788797 0.0030091321737446275 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 115220 6532 TRDSVKTVL True PC9_epitope_Rep5 1017.58185888933 1017.58076993586 30.098 2 0.15021071609350348 0.0007045974986788797 0.0030092067818345823 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 4109 10593 AHSESINVI True PC9_epitope_Rep5 968.4927095317599 968.49160993586 45.734 2 0.15021062921344755 0.0007045974986788797 0.0030092128072379343 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1'] 97321 9287 SEAPKSWMV True H1975_Epitope_Rep2 1033.49026700361 1033.4891699358602 40.68 2 0.15020428606735708 0.0007045974986788797 0.003009652756698298 ['ENSG00000154760|ENST00000285013|SLFN13'] 62155 7587 LLEKEREDLY True H1975_Epitope_Rep1 1306.6768814729799 1306.67524490379 34.176 3 0.15020032794643084 0.0007045974986788797 0.003009927317457367 ['ENSG00000102189|ENST00000322349|EEA1', 'EEA1|p.S653*|1|0.32|ENSG00000102189|chr12:92813065-92813065|G/-|frameshift_variant'] 121370 5972 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 28.042 2 0.15019847625069388 0.0007045974986788797 0.0030100557715620428 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 76267 8606 NPKEFYHEV True PC9_epitope_Rep5 1161.54547338061 1161.54436993586 38.047 2 0.1501972918459781 0.0007045974986788797 0.003010137937840508 ['ENSG00000174231|ENST00000304992|PRPF8'] 96214 15497 RYPTSIASL True PC9_epitope_Rep3 1006.5447451046199 1006.54364993586 64.759 2 0.15019627919129536 0.0007045974986788797 0.0030102081909922796 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 122440 8461 VGDVYIPR True NCI_RA007_Epitope_Rep1 917.4970666362099 917.49596993586 36.911 2 0.15018914128177208 0.0007045974986788797 0.0030107034314226415 ['nc|ENSG00000161547|Q01130-2|SRSF2', 'ENSG00000161547|ENST00000359995|SRSF2', 'SRSF2|p.D97Gfs*27|1|0.13|ENSG00000161547|chr17:76736873-76736874|-/G|frameshift_variant', 'nc|ENSG00000263465|Q9BRL6-2|SRSF8', 'ENSG00000263465|ENST00000587424|SRSF8'] 26422 17776 FIAKSFYDL True PC9_epitope_Rep6 1102.5698972233 1102.5688099358601 81.01 2 0.15018818065232648 0.0007045974986788797 0.0030107700877381777 ['ENSG00000176153|ENST00000389614|GPX2'] 62039 15131 LLDSDEPLVY True H1975_Epitope_Rep2 1162.57577044938 1162.57517496793 63.358 1 0.15018392269321074 0.0007045974986788797 0.003011065557404492 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 139145 12972 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 55.012 2 0.15018061756081486 0.0007045974986788797 0.003011294928116929 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 44571 19030 ILPKELQTW True PC9_epitope_Rep5 1126.6386454894598 1126.63754993586 78.227 2 0.15017586748066614 0.0007045974986788797 0.003011624606279059 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 27551 16092 FNDTFVHV True PC9_epitope_Rep2 977.4606811274899 977.45958993586 67.155 2 0.15016653122698903 0.0007045974986788797 0.0030122726914448466 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 72055 19747 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55652993586 81.931 2 0.15016403184999 0.0007045974986788797 0.003012446211702424 ['ENSG00000198712|ENST00000361739|MT-CO2'] 117177 22268 TVLEQVLPI True PC9_epitope_Rep5 1010.6011973515798 1010.6006749679301 90.661 1 0.15016078678743777 0.0007045974986788797 0.0030126715163304356 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 87474 8574 QQDPQQYNV True PC9_epitope_Rep4 1118.49925146418 1118.49814993586 40.461 2 0.15015618985523646 0.0007045974986788797 0.0030129907099605965 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 6166 9485 APNLQNQQV True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 41.341 2 0.15015572449742307 0.0007045974986788797 0.0030130230245285074 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 12042 14784 DHSPDSLPL True PC9_epitope_Rep3 979.46107505031 979.45996993586 62.002 2 0.15014791639149774 0.0007045974986788797 0.0030135652729135678 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 89542 20544 QYLQDAYSF True PC9_epitope_Rep5 1133.5029398622898 1133.50184993586 84.067 2 0.1501395753680537 0.0007045974986788797 0.003014144638086192 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 39698 3622 HLSLSHNPEQK True NCI_RA007_Epitope_Rep2 1288.65239806064 1288.65076490379 18.741 3 0.15013644786219918 0.0007045974986788797 0.0030143619023618564 ['ENSG00000100714|ENST00000652337|MTHFD1'] 95719 14560 RYGDLVDYL True NCI_RA007_Epitope_Rep4 1112.5502244078798 1112.54912993586 63.38 2 0.15013555523261277 0.0007045974986788797 0.003014423915184636 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 129927 12483 VRTPYTMSY True PC9_epitope_Rep2 1116.52738078832 1116.5262899358602 53.325 2 0.1501354191211844 0.0007045974986788797 0.0030144333712385746 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 2064 8795 AELDDTPMR True PC9_epitope_Rep5 1046.47025983502 1046.46916993586 38.772 2 0.15012519360427762 0.0007045974986788797 0.003015143851887343 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 40716 6288 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 29.585 2 0.15012038557941634 0.0007045974986788797 0.003015477976600308 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 54778 20639 KYNDNFFGL True PC9_epitope_Rep1 1116.5240096600398 1116.52290993586 84.209 2 0.15011916363254107 0.0007045974986788797 0.0030155628993927615 ['ENSG00000012963|ENST00000013070|UBR7'] 128758 19956 VPYLVGQVV True PC9_epitope_Rep4 972.5644179200399 972.56332993586 84.895 2 0.15011541538211254 0.0007045974986788797 0.0030158234099375157 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 2304 6475 AEPAKIEAFR True NCI_RA007_Epitope_Rep2 1130.6084079903399 1130.6067749037902 29.795 3 0.1501066733273857 0.0007045974986788797 0.0030164310864745857 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 106156 4574 STDPAAPNLK True NCI_RA007_Epitope_Rep3 1012.5189242796 1012.51782993586 24.878 2 0.15010156923157553 0.0007045974986788797 0.003016785938067987 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 104332 8759 SQIQEFKEA True PC9_epitope_Rep5 1078.5294889632999 1078.52838993586 38.634 2 0.15009761458714524 0.0007045974986788797 0.0030170609050343064 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 75030 20766 NHSFMPIVL True PC9_epitope_Rep1 1056.54263692964 1056.5415299358601 84.704 2 0.15009446600770954 0.0007045974986788797 0.0030172798440344195 ['ENSG00000198712|ENST00000361739|MT-CO2'] 21738 9897 ERTNIQVTV True PC9_epitope_Rep2 1058.57202248162 1058.57092993586 43.4 2 0.15009121260953406 0.0007045974986788797 0.0030175060883077124 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.G1211W|1|0.07|ENSG00000156535|chr6:73811076-73811076|G/T|missense_variant'] 1095 19454 AEALPLPLLP True H1975_Epitope_Rep3 1032.6219327961599 1032.62082993586 81.534 2 0.15009005088857166 0.0007045974986788797 0.003017586879534438 ['ENST00000256190.12_1_11:10315695-10315752:-|nuORF'] 90989 15226 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54415490379 63.832 3 0.1500891450519197 0.0007045974986788797 0.003017649876926069 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 134458 12746 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 54.034 2 0.15008185658812484 0.0007045974986788797 0.0030181568086983493 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 8693 8124 AVALPLQTK True NCI_RA007_Epitope_Rep5 939.57531695691 939.57420993586 37.934 2 0.1500721287908068 0.0007045974986788797 0.003018833534624463 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 40668 12666 HRQEIQVVL True PC9_epitope_Rep5 1120.63529144452 1120.6341899358601 53.724 2 0.15006982155639684 0.0007045974986788797 0.0030189940623270364 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 54731 20327 KYMDVQFDF True PC9_epitope_Rep2 1191.52704643515 1191.5259499358601 83.61 2 0.15006540541303173 0.0007045974986788797 0.0030193013427810356 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 115039 15554 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 64.977 2 0.15005948481627368 0.0007045974986788797 0.0030197133537341833 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 1030 8363 AEAEPEPELA True H1975_Epitope_Rep2 1054.4818700645399 1054.48076993586 37.12 2 0.1500562824611254 0.0007045974986788797 0.0030199362271305244 ['ENSG00000141696|ENST00000393928|P3H4'] 71196 19281 LYPDHFHLL True PC9_epitope_Rep1 1153.59202965021 1153.5903749037902 78.967 3 0.15004898920555795 0.0007045974986788797 0.0030204438748825703 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 47913 9277 IYIKQIKTF True NCI_RA007_Epitope_Rep1 1152.6906810623198 1152.6890249037901 40.084 3 0.1500409444283946 0.0007045974986788797 0.003021003930916881 ['ENSG00000103479|ENST00000262133|RBL2'] 27600 15247 FNPFVTSDR True PC9_epitope_Rep3 1081.51925863277 1081.5181699358602 63.794 2 0.15003589193807862 0.0007045974986788797 0.0030213557247423593 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 84869 5818 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 27.37 2 0.1500281846361073 0.0007045974986788797 0.003021892445852989 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 97494 7896 SEELTVTNA True H1975_Epitope_Rep2 962.4556553167 962.45454993586 35.318 2 0.15001917023800412 0.0007045974986788797 0.0030225203109730202 ['ENSG00000237649|ENST00000428849|KIFC1', 'KIFC1|p.R503Q|1|0.17|ENSG00000237649|chr6:33405603-33405603|G/A|missense_variant'] 90112 6235 REAQSLISA True H1975_Epitope_Rep3 973.5192586327698 973.51816993586 28.995 2 0.1500121732406743 0.0007045974986788797 0.0030230077509135265 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 140806 8733 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.48097496793 38.595 1 0.1500070950601652 0.0007045974986788797 0.003023361567106691 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 67398 5172 LSSPATLNSR True NCI_RA007_Epitope_Rep3 1044.5563724174801 1044.55526993586 27.335 2 0.15000170157607176 0.0007045974986788797 0.0030237373968531015 ['CON__P00761'] 14146 10644 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 45.966 2 0.1500004527196559 0.0007045974986788797 0.003023824426526691 ['ENSG00000149823|ENST00000279281|VPS51'] 9765 19871 AYILDTLVF True NCI_RA007_Epitope_Rep3 1053.57464825057 1053.57354993586 86.603 2 0.14999919915068102 0.0007045974986788797 0.003023911787114849 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 75068 11099 NHVASDISL True PC9_epitope_Rep1 954.47705946762 954.47596993586 47.579 2 0.1499966080601857 0.0007045974986788797 0.003024092366866878 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 17400 16657 EHDPQYAVIL True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 72.037 2 0.14999600906738492 0.0007045974986788797 0.0030241341137416306 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 29403 21558 FVDPVLNQL True PC9_epitope_Rep1 1043.56514619603 1043.56404993586 87.744 2 0.14999308165611508 0.0007045974986788797 0.0030243381482743825 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 95140 20661 RVFSDIIYTV True PC9_epitope_Rep3 1211.65502382959 1211.65392993586 84.746 2 0.1499927453570284 0.0007045974986788797 0.0030243615885053783 ['ENSG00000125676|ENST00000245838|THOC2'] 77558 12995 NTDNLLTEY True H1975_Epitope_Rep2 1081.49276910141 1081.49166993586 55.103 2 0.1499878445049832 0.0007045974986788797 0.003024703201109663 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 120410 5532 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.4288949679301 26.286 1 0.14998531245165803 0.0007045974986788797 0.003024879712273319 ['ENSG00000171316|ENST00000423902|CHD7'] 134012 10361 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 44.797 3 0.1499851371680217 0.0007045974986788797 0.0030248919317946623 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 74990 7743 NHQGTYVL True PC9_epitope_Rep2 930.4559301002199 930.45482993586 35.158 2 0.14998441872939397 0.0007045974986788797 0.0030249420167104495 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 107499 13031 SVNGVFKEV True PC9_epitope_Rep1 977.5181960036099 977.51708993586 54.993 2 0.14997889121733493 0.0007045974986788797 0.0030253273868797123 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 114935 11220 TQTAVITRI True PC9_epitope_Rep5 1001.5869442697699 1001.58584993586 48.147 2 0.14997824220959374 0.0007045974986788797 0.0030253726379699574 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 108310 6966 SYISRTNQL True NCI_RA007_Epitope_Rep4 1080.5563724174801 1080.55526993586 33.42 2 0.1499756856931836 0.0007045974986788797 0.0030255508937935714 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 77599 6706 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 30.706 2 0.14997198384689125 0.0007045974986788797 0.0030258090274943223 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 28931 13786 FTDPGMGNLTY True H1975_Epitope_Rep2 1214.52777471114 1214.5266699358601 58.173 2 0.14996310344636107 0.0007045974986788797 0.0030264283567181314 ['ENSG00000134569|ENST00000378623|LRP4'] 35868 8885 GTMTGMLYK True NCI_RA007_Epitope_Rep1 1000.47217441132 1000.47106993586 38.561 2 0.14995373435669765 0.0007045974986788797 0.003027081904499681 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 141288 8651 YTDMESEDY True H1975_Epitope_Rep2 1151.39648575807 1151.39597496793 38.234 1 0.14994894878058285 0.0007045974986788797 0.0030274157801171153 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 114927 10453 TQTAVITRI True PC9_epitope_Rep2 1001.5869442697699 1001.58584993586 45.527 2 0.14994395757348056 0.0007045974986788797 0.0030277640410671484 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 92592 5338 RMQKEITAL True NCI_RA007_Epitope_Rep5 1088.60121443492 1088.60010993586 27.224 2 0.14994354415671987 0.0007045974986788797 0.0030277928889667818 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ACTG1|p.D311N|1|0.16|ENSG00000184009|chr17:81510980-81510980|C/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 12013 20105 DHSFSLEL True PC9_epitope_Rep5 946.4396113297399 946.43850993586 82.381 2 0.14994335181966423 0.0007045974986788797 0.003027806310190018 ['ENSG00000128272|ENST00000674920|ATF4'] 18467 19985 EKDPSYFVF True PC9_epitope_Rep2 1130.5284263341398 1130.52732993586 82.274 2 0.14994154593173958 0.0007045974986788797 0.003027932327407846 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 9247 18551 AVPEIMDRI True PC9_epitope_Rep3 1042.5481162329 1042.5470099358602 76.575 2 0.14993993230125194 0.0007045974986788797 0.003028044933068226 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 48271 12329 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 52.281 3 0.14993881445967094 0.0007045974986788797 0.0030281229430185173 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 21679 5610 ERSGVNSEL True PC9_epitope_Rep3 989.47778774361 989.47668993586 26.658 2 0.14993628447152718 0.0007045974986788797 0.00302829950874367 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 121389 5807 VEVQDTPNA True H1975_Epitope_Rep3 971.45598966987 971.45544496793 27.359 1 0.14993430061307553 0.0007045974986788797 0.003028437967711249 ['nc|ENSG00000178057|Q9BU61-2|NDUFAF3', 'ENSG00000178057|ENST00000326925|NDUFAF3'] 134048 20372 VYKAFVMETF True PC9_epitope_Rep1 1233.6103821362897 1233.60928993586 83.185 2 0.14993286518459836 0.0007045974986788797 0.0030285381541643543 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 53463 16860 KRGDVIYIL True PC9_epitope_Rep1 1075.6389798426299 1075.6378899358601 69.677 2 0.14993249853918883 0.0007045974986788797 0.0030285637448943456 ['ENSG00000005020|ENST00000345317|SKAP2'] 11875 14873 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52815496793 65.147 1 0.14992839269919256 0.0007045974986788797 0.003028850334693547 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 60904 13668 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 57.599 2 0.14992699353138428 0.0007045974986788797 0.003028948003513475 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 76036 14519 NMDNMFESY True H1975_Epitope_Rep1 1149.41069635357 1149.4095899358601 61.05 2 0.14991444871990775 0.0007045974986788797 0.0030298238333840064 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 128042 9751 VPKNSDPWAA True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 42.366 2 0.14991363255745568 0.0007045974986788797 0.0030298808234020596 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 44978 13347 IPAPPLSKV True PC9_epitope_Rep1 920.56950330048 920.56840993586 56.198 2 0.14990411796074388 0.0007045974986788797 0.003030545276058991 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.L27M|1|0.25|ENSG00000148346|chr9:128149604-128149604|C/A|missense_variant'] 34698 7374 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.745 2 0.1498944600279421 0.0007045974986788797 0.003031219886974009 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 100628 21358 SLDDLLTNV True PC9_epitope_Rep4 988.5076908895601 988.50714496793 90.321 1 0.14988567055549448 0.0007045974986788797 0.0030318339654946537 ['ENSG00000143819|ENST00000272167|EPHX1'] 53834 16203 KTFSEILNRV True PC9_epitope_Rep1 1205.67682190333 1205.67572993586 67.142 2 0.14988457042165163 0.0007045974986788797 0.003031910835320351 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 38892 12727 HHFEGAQIL True PC9_epitope_Rep1 1050.5246783663797 1050.5235899358602 53.828 2 0.149881936262843 0.0007045974986788797 0.0030320949002001774 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 40753 16567 HRTEMDWVL True PC9_epitope_Rep2 1185.5600778989299 1185.55843490379 68.962 3 0.14987532010657703 0.0007045974986788797 0.003032557260802673 ['ENSG00000169813|ENST00000682386|HNRNPF'] 139927 11242 YQAEHLLQT True PC9_epitope_Rep2 1101.5454733806098 1101.54436993586 48.568 2 0.14987468519127953 0.0007045974986788797 0.0030326016346398275 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ADAM8|p.Q214Rfs*17|1|0.52|ENSG00000151651|chr10:133272862-133272862|T/-|frameshift_variant', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 126875 6178 VLQIDNAR True NCI_RA007_Epitope_Rep2 927.5137793295099 927.51268993586 28.638 2 0.14987460228918945 0.0007045974986788797 0.0030326074286633063 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 7330 11235 ARPPGYEF True PC9_epitope_Rep3 935.45011644379 935.44900993586 48.224 2 0.14987456705683957 0.0007045974986788797 0.003032609891054047 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 77832 5794 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.49742993586 27.276 2 0.14986440596838807 0.0007045974986788797 0.003033320133125663 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 63562 15963 LMDHTIPEV True PC9_epitope_Rep3 1053.51648175145 1053.5153899358602 66.548 2 0.14986265920953923 0.0007045974986788797 0.003033442245153466 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 36861 21460 GVLKVFLENV True PC9_epitope_Rep2 1116.6542955536 1116.6531899358602 88.018 2 0.14986073631590893 0.0007045974986788797 0.003033576676031636 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 98195 8612 SETEYVIRC True H1975_Epitope_Rep2 1098.5015599633 1098.50046993586 38.082 2 0.149860118480141 0.0007045974986788797 0.003033619870634033 ['ENSG00000181789|ENST00000314797|COPG1'] 126345 19838 VLIPKLPQL True PC9_epitope_Rep4 1019.6743027221899 1019.67320993586 84.437 2 0.14985742978611277 0.0007045974986788797 0.0030338078517791124 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 24218 4785 EYSKQMQRF True NCI_RA007_Epitope_Rep3 1215.57064258263 1215.56954993586 25.785 2 0.14985689906439506 0.0007045974986788797 0.003033844958776036 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 82932 14360 PSDLTVGQFY True H1975_Epitope_Rep2 1125.5342399905699 1125.5331499358601 60.386 2 0.1498505842016536 0.0007045974986788797 0.003034286515976641 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 14631 14083 DVDLEFLAK True H1975_Epitope_Rep1 1048.54407639828 1048.5429699358601 59.336 2 0.14985057523349493 0.0007045974986788797 0.0030342871431070268 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 6272 4330 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 23.082 2 0.14983824150459377 0.0007045974986788797 0.0030351497451028982 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 77931 6352 NVKVDPEIQ True H1975_Epitope_Rep3 1040.5502244078798 1040.54912993586 29.424 2 0.14983748596273727 0.0007045974986788797 0.0030352025944714992 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 72287 9608 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep2 983.4269984211501 983.42644496793 41.933 1 0.14983632029867722 0.0007045974986788797 0.003035284133259664 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 32085 7443 GESPVDYDGGR True PC9_epitope_Rep5 1150.4890807032998 1150.48798993586 33.584 2 0.14982348727065317 0.0007045974986788797 0.0030361819542121782 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 134627 16129 VYSPHVLNL True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 69.979 2 0.14981460679219627 0.0007045974986788797 0.0030368034027078977 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 107962 5814 SVYGYGVQK True NCI_RA007_Epitope_Rep3 999.5025459394698 999.50144993586 29.848 2 0.14981455950675973 0.0007045974986788797 0.003036806712042329 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 134790 22122 VYTVVDEMF True PC9_epitope_Rep5 1101.5052483614097 1101.5041499358601 90.127 2 0.14981297689292392 0.0007045974986788797 0.0030369174754566945 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 16640 5658 EEQHPELTP True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 26.761 2 0.1498026594403433 0.0007045974986788797 0.003037639668246672 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 29168 10899 FTQGHIVEV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 49.688 2 0.14980116492593185 0.0007045974986788797 0.003037744294246994 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 35656 7050 GTDSASGMDY True H1975_Epitope_Rep3 1002.3600406797 1002.35947496793 32.083 1 0.14979579872898668 0.0007045974986788797 0.0030381199934776024 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533897.1_1_11:88027176-88029469:-|nuORF'] 87775 19867 QRDFNMIDL True PC9_epitope_Rep3 1150.54409348162 1150.54298993586 81.655 2 0.14979300023773892 0.0007045974986788797 0.003038315940346957 ['ENSG00000068654|ENST00000263857|POLR1A'] 75687 21406 NLIDLDDLYV True PC9_epitope_Rep6 1191.6023195503901 1191.6012299358601 95.212 2 0.14978992925084675 0.0007045974986788797 0.0030385309815009515 ['ENSG00000125676|ENST00000245838|THOC2'] 48170 12622 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62730993586 53.553 2 0.1497875625182663 0.0007045974986788797 0.00303869671866389 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 101332 20073 SLIRNLEQL True PC9_epitope_Rep3 1084.62405805448 1084.62296993586 82.461 2 0.14978270811623312 0.0007045974986788797 0.003039036690099721 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 141286 8498 YTDMESEDY True H1975_Epitope_Rep1 1151.39648575807 1151.39538993586 37.617 2 0.1497794026862109 0.0007045974986788797 0.0030392682030607413 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 12014 17989 DHSFSLEL True PC9_epitope_Rep6 946.4396113297399 946.43850993586 81.822 2 0.14976908526235624 0.0007045974986788797 0.0030399909503759735 ['ENSG00000128272|ENST00000674920|ATF4'] 114891 9457 TQSEKQFVV True PC9_epitope_Rep3 1064.55022440788 1064.54912993586 41.32 2 0.1497686684949923 0.0007045974986788797 0.003040020149000702 ['ENSG00000163902|ENST00000296255|RPN1'] 46316 11764 ISQIVSSITAS True NCI_RA007_Epitope_Rep2 1104.60265390356 1104.60154993586 50.357 2 0.14976856375689843 0.0007045974986788797 0.0030400274869711312 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 71186 16059 LYNPKITSEL True PC9_epitope_Rep1 1176.63903941228 1176.6379499358602 66.584 2 0.14976790529436704 0.0007045974986788797 0.0030400736193830534 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 106824 15703 SVAQDIPKL True PC9_epitope_Rep1 969.5494961318899 969.54838993586 65.224 2 0.14975977261690002 0.0007045974986788797 0.0030406434587415578 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 105159 11585 SRFPQGAQL True PC9_epitope_Rep1 1002.5246783663797 1002.52358993586 49.439 2 0.14975232613963868 0.0007045974986788797 0.0030411653107732446 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 134624 16924 VYSPHVLNL True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 70.341 2 0.14975071892618955 0.0007045974986788797 0.0030412779566176885 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 77683 12740 NTIESLKDV True PC9_epitope_Rep3 1017.5342399905699 1017.53314993586 54.025 2 0.14974144334339262 0.0007045974986788797 0.0030419281417640416 ['ENSG00000180104|ENST00000512944|EXOC3'] 118022 19870 TYEGIFKTL True PC9_epitope_Rep1 1070.56481184286 1070.56370993586 81.248 2 0.14973791850336943 0.0007045974986788797 0.0030421752567143232 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 106851 6223 SVASPFTSK True NCI_RA007_Epitope_Rep5 922.4759968384601 922.47488993586 30.614 2 0.14973768558784795 0.0007045974986788797 0.0030421915863600175 ['ENSG00000187527|ENST00000342358|ATP13A5', 'ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4'] 27845 9338 FQDGTKATF True PC9_epitope_Rep5 1013.4818104948899 1013.48070993586 40.872 2 0.14973466050541945 0.0007045974986788797 0.003042403682017 ['ENSG00000110711|ENST00000279146|AIP'] 72240 20131 MHFQLPIQA True PC9_epitope_Rep5 1083.55353596651 1083.5524299358601 82.481 2 0.1497325321459224 0.0007045974986788797 0.003042552915138515 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 124764 18634 VHDEGVWAL True PC9_epitope_Rep3 1024.4977949121999 1024.49668993586 76.896 2 0.14973121650956983 0.0007045974986788797 0.0030426451666012103 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 8754 11119 AVDAVIAELK True H1975_Epitope_Rep1 1027.5913609438699 1027.59026993586 47.734 2 0.14973003122191797 0.0007045974986788797 0.0030427282804924498 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 72072 5456 MEVEAPSKPA True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 26.013 2 0.14972647472658476 0.0007045974986788797 0.003042977680075326 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 103933 17847 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51234993586 73.443 2 0.14972014834726036 0.0007045974986788797 0.003043421368343363 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 27175 21474 FLLGPRLVLA True PC9_epitope_Rep3 1097.6961007959299 1097.69500993586 87.891 2 0.14971734148054017 0.0007045974986788797 0.0030436182430891357 ['ENSG00000170348|ENST00000303575|TMED10'] 104993 16258 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.59957490379 67.673 3 0.14971314795885754 0.0007045974986788797 0.0030439124019860176 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 7912 4021 ATALPTGTSK True NCI_RA007_Epitope_Rep4 945.5131106231701 945.51200993586 21.724 2 0.1497120125309464 0.0007045974986788797 0.0030439920526150713 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 4620 15515 ALAAALAHI True PC9_epitope_Rep4 849.50723739709 849.50614993586 67.604 2 0.14970174408218548 0.0007045974986788797 0.0030447124818032455 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21', 'ENSG00000107625|ENST00000373585|DDX50'] 109385 10164 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep3 950.47091177432 950.4703649679301 44.138 1 0.1497011623005539 0.0007045974986788797 0.0030447533043899246 ['ENSG00000005022|ENST00000317881|SLC25A5'] 71473 16683 LYVVDLKKF True PC9_epitope_Rep4 1123.6641319613097 1123.66249490379 72.146 3 0.14969703485093627 0.0007045974986788797 0.0030450429358654966 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 70108 19024 LVPEFVHSI True PC9_epitope_Rep2 1039.57023157647 1039.56912993586 78.541 2 0.14969537978721253 0.0007045974986788797 0.0030451590827337955 ['nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENSG00000115183|ENST00000263635|TANC1'] 30038 13476 FYGDKMNLF True NCI_RA007_Epitope_Rep3 1133.52156713189 1133.52046993586 60.297 2 0.1496949190759771 0.0007045974986788797 0.0030451914147009407 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6'] 35487 10661 GSLNWVPVTK True NCI_RA007_Epitope_Rep4 1099.6025943339098 1099.6014899358602 47.856 2 0.14969359429990234 0.0007045974986788797 0.003045284387241104 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE', 'chr1:206016145-206021049|372|16.44|0.89|4.2|-|ENST00000360218|CTSE,CTSE'] 139203 13966 YLETVAAYY True H1975_Epitope_Rep2 1091.51752729727 1091.51642993586 58.868 2 0.1496815208191458 0.0007045974986788797 0.0030461318321325062 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 52851 12261 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54290993586 52.15 2 0.1496776185525406 0.0007045974986788797 0.0030464057847778793 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 54995 11300 KYQIINEEF True NCI_RA007_Epitope_Rep5 1182.5920892198599 1182.59098993586 50.111 2 0.1496680088289576 0.0007045974986788797 0.003047080525269989 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 131102 12075 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.5222499358601 51.459 2 0.1496665512994359 0.0007045974986788797 0.003047182877750758 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 48377 11536 IYTNLNQKI True PC9_epitope_Rep2 1105.61315901761 1105.61206993586 49.699 2 0.14966419302948908 0.0007045974986788797 0.003047348490413507 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 105396 20469 SRSETFLLL True PC9_epitope_Rep3 1064.5866099165999 1064.58550993586 83.992 2 0.14966329726324668 0.0007045974986788797 0.003047411399144765 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A'] 44082 20248 IIMEEVVKL True PC9_epitope_Rep1 1072.620218544 1072.6191299358602 82.712 2 0.14964815223365413 0.0007045974986788797 0.0030484752145542864 ['ENSG00000167880|ENST00000301607|EVPL'] 68262 5709 LTEAPLNPK True NCI_RA007_Epitope_Rep4 981.5494961318899 981.54838993586 28.574 2 0.1496464952075402 0.0007045974986788797 0.0030485916296252393 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 1489 6062 AEELASGHLA True H1975_Epitope_Rep3 996.4876241513199 996.48652993586 28.328 2 0.1496375016828741 0.0007045974986788797 0.003049223550708016 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 141328 8690 YTDSYTDTY True H1975_Epitope_Rep1 1127.42950013851 1127.4284099358601 38.357 2 0.14963123670787898 0.0007045974986788797 0.0030496638300128525 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 24286 11885 EYTPRSWNF True NCI_RA007_Epitope_Rep5 1198.54072235334 1198.5396299358601 52.37 2 0.14962514057121912 0.0007045974986788797 0.0030500923047345843 ['ENSG00000156671|ENST00000542569|SAMD8'] 84212 19699 PYLDSFYEY True PC9_epitope_Rep6 1195.5073565363898 1195.50624993586 88.428 2 0.14962022786446855 0.0007045974986788797 0.0030504376441871316 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 127589 6678 VNTLIRPDGEK True PC9_epitope_Rep5 1240.6775501793197 1240.67590490379 30.658 3 0.1496182293359823 0.0007045974986788797 0.0030505781421827226 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 103419 8559 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 37.875 2 0.1496157374839686 0.0007045974986788797 0.0030507533302020808 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 95150 5600 RVFTGVVTK True NCI_RA007_Epitope_Rep4 1005.5971150306499 1005.59600993586 28.139 2 0.14960792682476307 0.0007045974986788797 0.0030513025183680903 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1', 'CCAR1|p.T1062Ifs*11|1|0.15|ENSG00000060339|chr10:68788325-68788326|-/TATAC|frameshift_variant'] 21508 16558 ERLYLQQTL True PC9_epitope_Rep5 1162.6346227381798 1162.63352993586 68.694 2 0.1495988594544593 0.0007045974986788797 0.003051940192671675 ['ENSG00000166135|ENST00000299163|HIF1AN', 'ENST00000478787.1_1_10:102296230-102304880:+|nuORF'] 137410 5104 YEAPGVREA True NCI_RA007_Epitope_Rep3 990.4770594676198 990.47596993586 27.069 2 0.14959852157350192 0.0007045974986788797 0.00305196395714175 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 91613 20760 RIMPEDIIINC True PC9_epitope_Rep3 1315.6628287153098 1315.6617299358602 85.123 2 0.1495846515362768 0.0007045974986788797 0.003052939649328141 ['ENSG00000198900|ENST00000361337|TOP1'] 69545 13594 LVDDPLEY True H1975_Epitope_Rep1 962.4596780679799 962.45912496793 57.418 1 0.14958405647054654 0.0007045974986788797 0.003052981516362617 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 19564 8688 ELQEIQLK True NCI_RA007_Epitope_Rep2 999.56006081559 999.55896993586 38.442 2 0.14958283784954882 0.0007045974986788797 0.003053067256653451 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 96804 7409 SAQSFFENK True NCI_RA007_Epitope_Rep3 1056.48762415132 1056.48652993586 36.268 2 0.149568942037815 0.0007045974986788797 0.003054045114025765 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 36974 5934 GVMRVGLVAK True NCI_RA007_Epitope_Rep3 1028.6164705762396 1028.6153699358601 30.321 2 0.14955144507928367 0.0007045974986788797 0.0030552768299196144 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 104643 12667 SQSTVKVLI True PC9_epitope_Rep5 973.5807962601699 973.57968993586 53.728 2 0.1495398915922484 0.0007045974986788797 0.0030560904202569274 ['ENSG00000143621|ENST00000361891|ILF2'] 8638 14745 AVADDFCKV True PC9_epitope_Rep5 966.44806783846 966.44696993586 61.715 2 0.14953899645242266 0.0007045974986788797 0.003056153464523056 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 96368 11888 RYVEIVSQF True NCI_RA007_Epitope_Rep4 1139.5975089534697 1139.59640993586 52.723 2 0.1495302529470423 0.0007045974986788797 0.003056769333477642 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 58479 6389 LEQAVEHIA True H1975_Epitope_Rep2 1008.52400966004 1008.52290993586 29.499 2 0.14952774041096706 0.0007045974986788797 0.0030569463325984913 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 115704 7858 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.029 2 0.1495236975255716 0.0007045974986788797 0.0030572311607360587 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 141631 15193 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.4906099358602 63.596 2 0.14952355647622906 0.0007045974986788797 0.0030572410983785367 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 96065 18083 RYLSKVLEL True PC9_epitope_Rep5 1119.6651945904698 1119.6640899358601 74.569 2 0.14952187541260215 0.0007045974986788797 0.003057359540323551 ['nc|nan|Q8WUR7-2|C15orf40', 'ENSG00000169609|ENST00000304177|C15orf40', 'nc|nan|Q8WUR7-3|C15orf40', 'ENST00000565725.1_1_15:83677164-83680359:-|nuORF'] 19767 4778 ELSDIAHR True NCI_RA007_Epitope_Rep2 939.47739382079 939.47628993586 23.216 2 0.1495197890390625 0.0007045974986788797 0.0030575065453596734 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant'] 35875 8378 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.47106993586 38.901 2 0.14951429926734064 0.0007045974986788797 0.003057893386071833 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 22524 17314 ETHFGFETV True PC9_epitope_Rep1 1065.47672511445 1065.47562993586 71.415 2 0.14950968512192533 0.0007045974986788797 0.0030582185628312926 ['ENSG00000110871|ENST00000288532|COQ5', 'ENST00000547736.1_1_12:120964341-120966944:-|nuORF', 'ENST00000547448.1_1_12:120965158-120966944:-|nuORF'] 93696 4472 RQVASHVGL True NCI_RA007_Epitope_Rep4 965.5406627836898 965.53956993586 23.577 2 0.14950197301966192 0.0007045974986788797 0.0030587621414997364 ['ENSG00000110107|ENST00000227524|PRPF19'] 94875 11650 RSYWKEVLL True H1975_Epitope_Rep2 1192.6604435631998 1192.65934993586 49.881 2 0.14949515446683342 0.0007045974986788797 0.0030592428194717533 ['nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7', 'ENST00000513075.1_1_17:47900608-47903534:+|nuORF', 'ENST00000503635.1_1_17:47903366-47904308:+|nuORF'] 106283 4737 STFDTQITKK True NCI_RA007_Epitope_Rep4 1167.6135529404298 1167.61189490379 24.655 3 0.14949468929077553 0.0007045974986788797 0.00305927561507684 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 97934 11863 SENFEELLK True H1975_Epitope_Rep1 1107.54480467427 1107.54370993586 50.63 2 0.14948640453893366 0.0007045974986788797 0.0030598597610496437 ['ENSG00000143320|ENST00000368222|CRABP2'] 77743 11156 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep3 1193.57505963717 1193.57396993586 48.006 2 0.14948481189472304 0.0007045974986788797 0.003059972068832479 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 1336 7450 AEDVLSGKVSA True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 33.635 2 0.14948264009895001 0.0007045974986788797 0.0030601252230011903 ['ENSG00000175390|ENST00000651655|EIF3F'] 129701 9698 VRPPVQVY True PC9_epitope_Rep6 956.5443511817998 956.54324993586 47.693 2 0.14948172052810768 0.0007045974986788797 0.0030601900730684276 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 76891 10646 NRDLSTPGL True PC9_epitope_Rep3 971.5036085686299 971.50250993586 45.897 2 0.14947354984557915 0.0007045974986788797 0.0030607663468462023 ['ENSG00000131711|ENST00000296755|MAP1B'] 74978 17311 NHQDVAGVFAL True PC9_epitope_Rep6 1169.58292151849 1169.58182993586 79.197 2 0.14947260202511178 0.0007045974986788797 0.0030608332030984515 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 75824 17774 NLPDEIYHV True PC9_epitope_Rep1 1098.5345743437401 1098.53346993586 73.164 2 0.14946831191806528 0.0007045974986788797 0.0030611358318364404 ['ENSG00000148335|ENST00000372483|NTMT1'] 61395 8787 LITPAVVSER True H1975_Epitope_Rep3 1083.62880908175 1083.6277099358601 38.805 2 0.14946813435622064 0.0007045974986788797 0.0030611483578806883 ['ENSG00000118181|ENST00000527673|RPS25'] 110228 4737 TEQQQRFHEI True H1975_Epitope_Rep3 1314.6316626160599 1314.63001490379 23.346 3 0.14946806619592715 0.0007045974986788797 0.0030611531662406164 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 124717 16413 VHAELADVL True PC9_epitope_Rep2 965.5181960036099 965.51708993586 68.376 2 0.14946733663761702 0.0007045974986788797 0.003061204633317145 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'CCT6B|p.I363*|1|0.11|ENSG00000132141|chr17:34939308-34939309|AT/-|frameshift_variant', 'CCT6B|p.E364Rfs*28|1|0.12|ENSG00000132141|chr17:34939306-34939306|C/-|frameshift_variant', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 44996 15393 IPAYLAETL True H1975_Epitope_Rep1 989.5433481222899 989.54279496793 64.478 1 0.14945475087315252 0.0007045974986788797 0.0030620926383394596 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 115255 11379 TREEGTPLTL True PC9_epitope_Rep4 1115.5822528121498 1115.5811499358601 51.542 2 0.1494523499050661 0.0007045974986788797 0.003062262070895831 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 21388 10979 ERIGETPEL True PC9_epitope_Rep4 1042.5294889632999 1042.52838993586 50.005 2 0.1494490180421134 0.0007045974986788797 0.0030624972107059657 ['ENSG00000168806|ENST00000305641|LCMT2'] 41410 16681 HYGLPVVV True PC9_epitope_Rep4 882.49633836022 882.49524993586 72.139 2 0.1494451931477912 0.0007045974986788797 0.0030627671674148607 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 138770 17291 YITERIIAV True PC9_epitope_Rep2 1076.62299542532 1076.62188993586 71.768 2 0.1494450479656117 0.0007045974986788797 0.0030627774146752607 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 120436 3777 VEEPSRPSA True H1975_Epitope_Rep2 970.4719740871799 970.47086993586 19.539 2 0.1494409667960131 0.0007045974986788797 0.0030630654860842937 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 21235 14580 ERDPSPWAV True PC9_epitope_Rep1 1055.50360856863 1055.5025099358602 60.905 2 0.14944086350149574 0.0007045974986788797 0.0030630727775297103 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 10011 20083 AYQSIQNYL True PC9_epitope_Rep2 1098.53457434374 1098.53346993586 82.657 2 0.14943972697354038 0.0007045974986788797 0.003063153004918457 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 136863 7345 YADPVNAHY True H1975_Epitope_Rep2 1048.46140940348 1048.46030993586 33.193 2 0.1494306752127386 0.0007045974986788797 0.003063792042435453 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 23752 20886 EYGKFFVTL True PC9_epitope_Rep3 1102.5698972233 1102.5688099358601 85.612 2 0.149427515007527 0.0007045974986788797 0.0030640151783120225 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 141989 22014 YVITDLTQL True PC9_epitope_Rep5 1064.57537652656 1064.57426993586 89.703 2 0.1494247663929165 0.0007045974986788797 0.0030642092657391265 ['ENSG00000134070|ENST00000256458|IRAK2'] 35854 14360 GTMEWIMIK True NCI_RA007_Epitope_Rep1 1107.54567370475 1107.5445699358602 59.897 2 0.14942254234312746 0.0007045974986788797 0.0030643663211228243 ['ENSG00000168273|ENST00000477703|UQCC5'] 103884 12375 SQADAFFKA True PC9_epitope_Rep4 983.47124581119 983.47014993586 55.407 2 0.14941939769223198 0.0007045974986788797 0.0030645884001289656 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L'] 22841 5500 EVANSTANLVK True H1975_Epitope_Rep3 1144.60880191316 1144.6077099358602 26.207 2 0.1494161868787777 0.0007045974986788797 0.003064815168144162 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant'] 85814 14602 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 60.989 2 0.1494098043982075 0.0007045974986788797 0.0030652659890151057 ['ENSG00000085872|ENST00000546361|CHERP'] 107528 16826 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 69.969 2 0.14940406619945268 0.0007045974986788797 0.003065671357961289 ['ENSG00000073756|ENST00000367468|PTGS2'] 106317 8651 STFSEIFKK True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 41.108 2 0.1494024518650592 0.0007045974986788797 0.0030657854105148857 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 111036 10724 THDEAVQVL True PC9_epitope_Rep3 1010.5032742154598 1010.50216993586 46.204 2 0.14940211337135836 0.0007045974986788797 0.0030658093255945883 ['ENSG00000101400|ENST00000217381|SNTA1', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 28276 19809 FRNIPGITL True PC9_epitope_Rep5 1029.5971150306498 1029.5960099358601 81.243 2 0.14939634910743899 0.0007045974986788797 0.003066216607858687 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 104053 4615 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44466993586 22.809 2 0.14939452788959182 0.0007045974986788797 0.0030663452997916245 ['ENSG00000130935|ENST00000253247|NOL11'] 90824 9440 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 41.279 2 0.1493944732180897 0.0007045974986788797 0.0030663491631035683 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 73331 9738 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4690749679298 42.387 1 0.1493933820176883 0.0007045974986788797 0.0030664262728004083 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 62384 17236 LLGPRLVLA True PC9_epitope_Rep6 950.6276868829399 950.62658993586 78.896 2 0.1493891308963386 0.0007045974986788797 0.0030667266967784436 ['ENSG00000170348|ENST00000303575|TMED10'] 73301 19449 M[Oxidation]TDPIRILV True PC9_epitope_Rep3 1072.5950668057599 1072.59396993586 80.036 2 0.14938583698878863 0.0007045974986788797 0.0030669594952258523 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 61419 12232 LIVENLSSR True PC9_epitope_Rep1 1029.5818588893299 1029.5807699358602 51.911 2 0.1493857816173732 0.0007045974986788797 0.0030669634087767154 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENSG00000116350|ENST00000373795|SRSF4', 'nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5'] 24203 17472 EYRPEFSNF True PC9_epitope_Rep1 1187.5247379360299 1187.52364993586 72.002 2 0.14938398884848028 0.0007045974986788797 0.0030670901211051356 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 71791 5398 MEGKVPVAA True H1975_Epitope_Rep3 900.4738886634798 900.4733349679301 25.829 1 0.1493801532084425 0.0007045974986788797 0.0030673612404106135 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 140993 12077 YSHPGVVFL True H1975_Epitope_Rep2 1017.5283667644899 1017.52726993586 51.536 2 0.1493771926817598 0.0007045974986788797 0.00306757051930529 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 11908 19524 DHLLSVSL True PC9_epitope_Rep3 882.4810822189 882.47998993586 80.33 2 0.14937661777950087 0.0007045974986788797 0.003067611160650928 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 49055 8875 KEHEVTIFV True NCI_RA007_Epitope_Rep4 1100.5866099165999 1100.58550993586 40.963 2 0.14937610492618844 0.0007045974986788797 0.0030676474160464314 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 111114 7625 THEEAVTAL True PC9_epitope_Rep2 969.4767251144499 969.47562993586 34.701 2 0.14936508609791008 0.0007045974986788797 0.003068426478618008 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 40795 11399 HRYGDSEFTV True PC9_epitope_Rep1 1209.54145062933 1209.5398049037901 48.726 3 0.14936146674172315 0.0007045974986788797 0.003068682420385458 ['ENSG00000169813|ENST00000682386|HNRNPF'] 68364 14305 LTEPTGLLY True H1975_Epitope_Rep3 1005.5382627418498 1005.53767496793 60.37 1 0.14935403866255792 0.0007045974986788797 0.0030692077615024293 ['ENSG00000168758|ENST00000305476|SEMA4C'] 76505 15660 NQIKEFIYA True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 65.512 2 0.14935252523898415 0.0007045974986788797 0.0030693148073690905 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 1649 7025 AEFVEVTK True NCI_RA007_Epitope_Rep2 921.4807478657299 921.47964993586 31.948 2 0.1493513175627914 0.0007045974986788797 0.003069400230103141 ['CON__P02769'] 61279 4861 LIPNASQAESK True H1975_Epitope_Rep3 1156.60880191316 1156.6077099358602 23.823 2 0.1493486973762097 0.0007045974986788797 0.0030695855722750226 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF'] 90692 6659 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 30.566 2 0.14934798388976425 0.0007045974986788797 0.0030696360435600303 ['ENSG00000129250|ENST00000320785|KIF1C'] 121554 21263 VFDPKVFTF True PC9_epitope_Rep1 1098.57498260374 1098.57388993586 86.613 2 0.14934194091766226 0.0007045974986788797 0.003070063550214896 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 35353 7557 GRYAGEESL True PC9_epitope_Rep1 980.4563240230399 980.45522993586 33.886 2 0.14934128559551935 0.0007045974986788797 0.0030701099141722693 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 74787 9664 NHDTALTL True PC9_epitope_Rep2 883.43994568291 883.43884993586 42.511 2 0.14933760403347668 0.0007045974986788797 0.0030703703971701984 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 57586 4670 LEDVSKPPA True H1975_Epitope_Rep2 954.5022115863 954.50110993586 23.059 2 0.14932391690187277 0.0007045974986788797 0.0030713390010806856 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 108242 22132 SYIDVLPEF True PC9_epitope_Rep4 1081.53317736141 1081.53267496793 93.347 1 0.1493233863550251 0.0007045974986788797 0.0030713765526707553 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 92368 18953 RLPETLPSL True PC9_epitope_Rep3 1024.59169529704 1024.5905899358602 78.126 2 0.14931863103870138 0.0007045974986788797 0.0030717131497428594 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 72060 19573 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55652993586 82.008 2 0.14931588406042226 0.0007045974986788797 0.0030719076067141165 ['ENSG00000198712|ENST00000361739|MT-CO2'] 75269 19448 NIIELVHQV True PC9_epitope_Rep2 1063.60259433391 1063.6014899358602 80.187 2 0.14931587130211837 0.0007045974986788797 0.003071908509895508 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 34818 19369 GQIEVVPEV True PC9_epitope_Rep3 968.5178616504398 968.51676993586 79.726 2 0.14931526085776917 0.0007045974986788797 0.0030719517245674298 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 43686 15826 IHDGMNLEL True PC9_epitope_Rep4 1040.49608066004 1040.49498993586 68.798 2 0.14931212421492498 0.0007045974986788797 0.0030721737838218274 ['ENSG00000198258|ENST00000586895|UBL5'] 40661 10785 HRQEIQVVL True PC9_epitope_Rep2 1120.63529144452 1120.6341899358601 46.801 2 0.149301230329691 0.0007045974986788797 0.0030729451427141817 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 4051 6335 AHIPKSDAL True PC9_epitope_Rep1 950.5185303567799 950.51742993586 29.179 2 0.1492928987040106 0.0007045974986788797 0.003073535206833995 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 54020 5541 KVHVIFNYK True NCI_RA007_Epitope_Rep5 1146.65496425994 1146.65332490379 27.999 3 0.14928924930863283 0.0007045974986788797 0.0030737937005870077 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 105127 16370 SRFGKFVQL True PC9_epitope_Rep1 1080.60801406752 1080.6069099358601 67.788 2 0.14928432074093648 0.0007045974986788797 0.003074142834943436 ['ENSG00000145555|ENST00000513610|MYO10'] 87793 12086 QRDPNSPLYSV True PC9_epitope_Rep2 1274.62551460646 1274.62440993586 51.798 2 0.14928168737396785 0.0007045974986788797 0.003074329395964844 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF'] 78655 16007 NYVEKGFQI True PC9_epitope_Rep5 1096.5553097883198 1096.5542099358602 66.562 2 0.1492792695493627 0.0007045974986788797 0.003074500696799818 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 134451 12147 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 52.033 2 0.14927840557786562 0.0007045974986788797 0.0030745619107560335 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 54863 20726 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 87.887 2 0.14927823491503198 0.0007045974986788797 0.003074574002672527 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 85580 13388 QGFQLTHSL True PC9_epitope_Rep6 1029.5243440132099 1029.5232499358601 63.167 2 0.14927699179494186 0.0007045974986788797 0.003074662082471372 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'TUBB2A|p.G140V|1|0.41|ENSG00000137267|chr6:3154782-3154782|C/A|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 99266 18950 SHQLDFNVL True PC9_epitope_Rep2 1071.53490869691 1071.53380993586 78.256 2 0.14927549601026446 0.0007045974986788797 0.0030747680678489733 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 134184 22657 VYLPPEAFTF True PC9_epitope_Rep2 1182.5961119711399 1182.5950099358602 92.647 2 0.14927193332129424 0.0007045974986788797 0.0030750205205239494 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 104159 8203 SQFGTEHVL True NCI_RA007_Epitope_Rep3 1016.4927095317599 1016.49160993586 39.399 2 0.14926727677642454 0.0007045974986788797 0.003075350515098286 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 17537 19181 EHGNFLITV True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 78.574 2 0.14926144270298697 0.0007045974986788797 0.003075764007137055 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 104798 23248 SQYPEIIFL True PC9_epitope_Rep1 1108.580461907 1108.57987496793 94.211 1 0.1492568854890892 0.0007045974986788797 0.003076087039795823 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 32575 7473 GGGSIEVSVPR True H1975_Epitope_Rep1 1056.55637241748 1056.55526993586 33.743 2 0.1492541939132955 0.0007045974986788797 0.003076277844790156 ['ENSG00000107164|ENST00000319725|FUBP3', 'ENST00000487406.2_1_9:133495824-133506568:+|nuORF', 'nc|ENSG00000107164|Q96I24-2|FUBP3'] 115590 15985 TRTEQTFIL True PC9_epitope_Rep1 1107.59242357303 1107.5913299358601 66.295 2 0.1492499654516495 0.0007045974986788797 0.0030765776229491923 ['nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 54059 18251 KVIEINPYL True PC9_epitope_Rep2 1087.62774645259 1087.62664993586 75.522 2 0.14923582686658252 0.0007045974986788797 0.003077580193694207 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 99337 9893 SHSSFQASL True PC9_epitope_Rep5 962.44575933934 962.44466993586 43.023 2 0.14922806866233784 0.0007045974986788797 0.003078130468147682 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 88234 7652 QSDKVYEVY True H1975_Epitope_Rep2 1129.52915461013 1129.52804993586 34.387 2 0.1492238425887579 0.0007045974986788797 0.0030784302565917557 ['ENSG00000156162|ENST00000414645|DPY19L4', 'ENST00000456901.1_1_7:145280818-145281352:+|nuORF'] 101521 20948 SLLENLEKI True PC9_epitope_Rep5 1057.60192562757 1057.60082993586 85.634 2 0.1492090329971178 0.0007045974986788797 0.003079481046111432 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 29661 19390 FVLDHEDGLNL True PC9_epitope_Rep4 1270.61936659686 1270.61826993586 82.694 2 0.14920200207048978 0.0007045974986788797 0.0030799800385868915 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 21195 10966 ERDMSNVSL True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 47.164 2 0.14919812909890745 0.0007045974986788797 0.003080254941948726 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 134477 20722 VYPQYVIEY True PC9_epitope_Rep5 1172.57537652656 1172.5748749679299 84.765 1 0.14919289792115795 0.0007045974986788797 0.003080626289499146 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 117738 10584 TVVERLVKV True PC9_epitope_Rep4 1041.65462990677 1041.6535299358602 48.452 2 0.14919072620731946 0.0007045974986788797 0.0030807804668421005 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 76725 14688 NQTPVTLQV True PC9_epitope_Rep6 998.5396597241801 998.53911496793 68.429 1 0.1491713074486517 0.0007045974986788797 0.0030821594118999388 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 134020 8584 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 40.498 3 0.14917052323805507 0.0007045974986788797 0.003082215112365651 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 69571 16708 LVDEWLDSY True H1975_Epitope_Rep3 1138.51825557326 1138.51767496793 69.792 1 0.14915547471106474 0.0007045974986788797 0.0030832841647133714 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 64521 19372 LPRLPVPAV True PC9_epitope_Rep2 960.6120368187999 960.61092993586 79.89 2 0.14915483053026327 0.0007045974986788797 0.0030833299357676054 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 17246 14508 EHAFAVQQL True PC9_epitope_Rep3 1041.5243440132099 1041.5232499358601 60.926 2 0.1491544796270627 0.0007045974986788797 0.0030833548688185175 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 1479 7229 AEEIPSRIQA True H1975_Epitope_Rep1 1112.58258716532 1112.5814899358602 32.817 2 0.14915379125596395 0.0007045974986788797 0.003083403780872292 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 28121 19158 FRADDTFEAL True PC9_epitope_Rep5 1183.55095268387 1183.54984993586 78.728 2 0.14915278671352897 0.0007045974986788797 0.003083475159795142 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 73200 20236 MRYVASYLL True PC9_epitope_Rep1 1114.5845017416198 1114.5834099358601 82.665 2 0.14915119663043053 0.0007045974986788797 0.0030835881483481167 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 86953 19158 QLVRDLLEV True PC9_epitope_Rep4 1083.62880908175 1083.6277099358601 81.788 2 0.1491481640918611 0.0007045974986788797 0.0030838036467145304 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 54876 19781 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 88.744 2 0.14914311819535547 0.0007045974986788797 0.003084162251618055 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 94976 18054 RTMENLVEL True PC9_epitope_Rep1 1103.5644945730298 1103.5633899358602 74.239 2 0.14913897481759342 0.0007045974986788797 0.003084456746793436 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 75045 8746 NHSNQFTQL True PC9_epitope_Rep2 1087.50467119779 1087.50356993586 39.0 2 0.1491367407848099 0.0007045974986788797 0.0030846155447679826 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A'] 73341 9722 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4690749679298 42.416 1 0.1491362626928971 0.0007045974986788797 0.0030846495292239716 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 21741 9395 ERTNIQVTV True PC9_epitope_Rep4 1058.57202248162 1058.57092993586 43.745 2 0.14913204269809466 0.0007045974986788797 0.003084949517471138 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.G1211W|1|0.07|ENSG00000156535|chr6:73811076-73811076|G/T|missense_variant'] 136861 7180 YADPVNAHY True H1975_Epitope_Rep1 1048.46140940348 1048.46030993586 32.638 2 0.14913111318769806 0.0007045974986788797 0.0030850155978042453 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 7599 18564 ASFNDTFVHV True PC9_epitope_Rep1 1135.5298233164701 1135.52927496793 76.194 1 0.14912620270845423 0.0007045974986788797 0.0030853647147571386 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 128785 18222 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 75.103 2 0.14912056825221384 0.0007045974986788797 0.0030857653522497 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 104951 12130 SRDEYYHLL True PC9_epitope_Rep6 1194.56693710118 1194.56530490379 58.003 3 0.149117367817422 0.0007045974986788797 0.003085992941929294 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 40613 13496 HRIQDLEQL True PC9_epitope_Rep5 1150.6094706195 1150.60783490379 56.932 3 0.14911537365845437 0.0007045974986788797 0.0030861347592346846 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 102472 23101 SLVELLNQI True PC9_epitope_Rep2 1027.5913609438699 1027.59026993586 94.348 2 0.14910725328211155 0.0007045974986788797 0.0030867123177446987 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 89733 12499 RADGNFLLY True H1975_Epitope_Rep2 1067.53999407735 1067.5388899358602 53.169 2 0.14910579090732162 0.0007045974986788797 0.0030868163399959065 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 32261 20983 GFAFVTFDDHD True PC9_epitope_Rep1 1269.5302172392899 1269.52912993586 85.537 2 0.14910540051169827 0.0007045974986788797 0.0030868441103696557 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 36645 19984 GVIEKLLTS True PC9_epitope_Rep1 958.5698972233 958.56880993586 81.693 2 0.14909742647810748 0.0007045974986788797 0.003087411389106418 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 77933 6457 NVKVDPEIQ True NCI_RA007_Epitope_Rep4 1040.5502244078798 1040.54912993586 31.435 2 0.14909735324182918 0.0007045974986788797 0.00308741659967108 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 72863 11291 MPQSGTGVSV True PC9_epitope_Rep3 961.45388149489 961.45278993586 48.436 2 0.1490956600070879 0.0007045974986788797 0.0030875370712194136 ['ENSG00000115233|ENST00000409682|PSMD14'] 106897 10887 SVDGVIKEV True PC9_epitope_Rep6 944.51786165044 944.51676993586 52.739 2 0.14909444733657862 0.0007045974986788797 0.003087623354094981 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 5015 17909 ALIDRMVNL True PC9_epitope_Rep6 1043.57975071435 1043.57864993586 81.511 2 0.1490905226955529 0.0007045974986788797 0.0030879026131861178 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 7197 17072 AQYKFVYQV True PC9_epitope_Rep5 1144.59169529704 1144.5905899358602 70.686 2 0.14907298023315088 0.0007045974986788797 0.0030891511600689265 ['ENSG00000152104|ENST00000366956|PTPN14'] 76209 4054 NNPSKPLHVIK True NCI_RA007_Epitope_Rep2 1245.7193554216499 1245.71770490379 20.408 3 0.14907025965531553 0.0007045974986788797 0.0030893448363210575 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 25392 15451 FEDDAIQLV True H1975_Epitope_Rep2 1048.50769088956 1048.50717496793 64.588 1 0.14906868025024897 0.0007045974986788797 0.0030894572787347257 ['ENSG00000085840|ENST00000371568|ORC1'] 107385 18741 SVLKSLVEI True PC9_epitope_Rep4 986.6011973515799 986.60010993586 80.171 2 0.14906012629566054 0.0007045974986788797 0.003090066330269943 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 52665 21663 KLVEFDFLGA True PC9_epitope_Rep1 1137.60701100801 1137.6059099358602 88.155 2 0.14905728570451723 0.0007045974986788797 0.003090268610099786 ['ENSG00000013810|ENST00000313288|TACC3', 'TACC3|p.A598S|1|0.3|ENSG00000013810|chr4:1737284-1737284|G/T|missense_variant', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 40340 11182 HQQSIPAVL True PC9_epitope_Rep6 991.5450794577898 991.5439899358599 53.977 2 0.14905526904974153 0.0007045974986788797 0.0030904122250332193 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 120314 13663 VEDWDSFQA True H1975_Epitope_Rep2 1095.45090428943 1095.44980993586 57.694 2 0.14905297838678763 0.0007045974986788797 0.0030905753613626615 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 77228 18069 NRVPAGNWVL True PC9_epitope_Rep3 1124.60907669668 1124.6079699358602 74.699 2 0.14904056266438875 0.0007045974986788797 0.003091459732851671 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000590367.5_1_17:42931463-42950195:-|nuORF', 'ENST00000586276.5_1_17:42937766-42940268:-|nuORF'] 98698 12238 SGFSGVIRL True H1975_Epitope_Rep3 934.52361573722 934.52250993586 52.248 2 0.149031376871186 0.0007045974986788797 0.003092114198696203 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 26372 9712 FHTTPNTSL True PC9_epitope_Rep3 1016.49270953176 1016.49160993586 42.312 2 0.14902460946390766 0.0007045974986788797 0.003092596448532234 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 42470 6767 IEEDKWRVA True H1975_Epitope_Rep3 1144.5876725457601 1144.58602490379 30.984 3 0.14901125348064492 0.0007045974986788797 0.003093548424232707 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'STARD4|p.K33M|1|0.13|ENSG00000164211|chr5:111507336-111507336|T/A|missense_variant', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'ENSG00000164211|ENST00000296632|STARD4'] 93453 3121 RQHNTEIRM True NCI_RA007_Epitope_Rep2 1183.5880239822698 1183.58638490379 16.765 3 0.14900712767724048 0.0007045974986788797 0.0030938425584770787 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15'] 141067 10543 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 45.575 2 0.14900676752070655 0.0007045974986788797 0.0030938682358565488 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 21431 6761 ERIQHAVQL True PC9_epitope_Rep2 1092.60399131624 1092.60288993586 31.413 2 0.14900506541761913 0.0007045974986788797 0.003093989590257666 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 134358 10092 VYPEKLATKF True PC9_epitope_Rep6 1194.6648602372995 1194.66322490379 49.423 3 0.14899901724332112 0.0007045974986788797 0.0030944208436943814 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 9284 8151 AVQEFGLAR True NCI_RA007_Epitope_Rep5 989.5294293936498 989.52832993586 38.035 2 0.14899365915597665 0.0007045974986788797 0.0030948029417835875 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 90447 7132 REIVAISSA True H1975_Epitope_Rep2 944.5290950404799 944.52798993586 32.366 2 0.1489907471986423 0.0007045974986788797 0.0030950106201558017 ['ENSG00000169019|ENST00000381571|COMMD8'] 91133 20238 RFVNVVPTF True PC9_epitope_Rep1 1077.5971150306498 1077.5960099358601 82.672 2 0.14898098871036425 0.0007045974986788797 0.003095706688544545 ['ENSG00000149806|ENST00000529639|FAU'] 105738 21276 SSFPRFYFV True PC9_epitope_Rep3 1148.5654805492 1148.5643899358602 87.134 2 0.1489785978497907 0.0007045974986788797 0.0030958772512681633 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 47383 17727 IVIRGLNTI True PC9_epitope_Rep1 997.62841515893 997.62730993586 72.984 2 0.14897411655207346 0.0007045974986788797 0.0030961969698621687 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 72053 19610 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55707496793 81.639 1 0.14896808576312995 0.0007045974986788797 0.003096627288919055 ['ENSG00000198712|ENST00000361739|MT-CO2'] 104764 12759 SQVVQVVL True NCI_RA007_Epitope_Rep5 870.5174677276198 870.51636993586 55.749 2 0.14896329267136785 0.0007045974986788797 0.0030969693361649 ['ENSG00000102753|ENST00000261667|KPNA3'] 98653 9479 SGAPHAILL True H1975_Epitope_Rep2 877.5021520166499 877.50104993586 41.429 2 0.148956882292696 0.0007045974986788797 0.0030974268559026135 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 74850 17758 NHFPGSFQI True PC9_epitope_Rep2 1045.49812926537 1045.4970299358602 73.589 2 0.14895643576701542 0.0007045974986788797 0.0030974587277134355 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 76830 10205 NRAQIQTVI True PC9_epitope_Rep2 1041.59309227937 1041.59198993586 44.59 2 0.1489505912207958 0.0007045974986788797 0.0030978759259136413 ['ENSG00000114030|ENST00000344337|KPNA1'] 138864 13826 YKDGTELEL True PC9_epitope_Rep5 1066.51825557326 1066.51714993586 58.202 2 0.1489497144347017 0.0007045974986788797 0.003097938517902995 ['ENSG00000143815|ENST00000272163|LBR'] 95888 7040 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60750490379 33.758 3 0.14894701637765734 0.0007045974986788797 0.0030981311346449203 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 89651 14251 QYTQALEKF True PC9_epitope_Rep1 1126.5658744720197 1126.56476993586 59.641 2 0.1489459224299264 0.0007045974986788797 0.0030982092359626567 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 108247 20955 SYIDVLPEF True PC9_epitope_Rep6 1081.53317736141 1081.53208993586 93.393 2 0.14893998215553259 0.0007045974986788797 0.003098633370196396 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 76740 10815 NQVEIKPEM True PC9_epitope_Rep1 1086.5379454720198 1086.5368499358601 46.487 2 0.14893986606399354 0.0007045974986788797 0.003098641659681417 ['ENSG00000115268|ENST00000592588|RPS15'] 1039 6349 AEAEPPSEV True H1975_Epitope_Rep3 927.41854153199 927.4179949679301 29.413 1 0.14893837547001254 0.0007045974986788797 0.003098748097103432 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 104715 15425 SQVDRLVALA True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 71.488 2 0.1489377463687051 0.0007045974986788797 0.003098793019832092 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 90219 11064 REDPNWWQA True H1975_Epitope_Rep2 1200.5312202988 1200.53012993586 47.588 2 0.1489372768719384 0.0007045974986788797 0.003098826545976941 ['ENSG00000105926|ENST00000222644|PALS2'] 40336 13186 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5439899358599 55.725 2 0.14892537145213763 0.0007045974986788797 0.0030996768169532117 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 70482 19824 LVVGDIAQV True PC9_epitope_Rep5 912.5280324113199 912.52692993586 81.299 2 0.14892302124472567 0.0007045974986788797 0.0030998446934220676 ['nc|ENSG00000067842|Q16720-8|ATP2B3', 'nc|ENSG00000067842|Q16720-7|ATP2B3', 'nc|ENSG00000067842|Q16720-6|ATP2B3', 'nc|ENSG00000067842|Q16720-3|ATP2B3', 'nc|ENSG00000067842|Q16720-5|ATP2B3', 'nc|ENSG00000067842|Q16720-2|ATP2B3', 'nc|ENSG00000067842|Q16720-4|ATP2B3', 'ENSG00000067842|ENST00000263519|ATP2B3'] 39095 5497 HHTTQQTFL True PC9_epitope_Rep4 1111.54105670651 1111.53994993586 27.903 2 0.14892073266642722 0.0007045974986788797 0.003100008176389044 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 134848 20253 VYVEKISFL True PC9_epitope_Rep5 1096.6168474157198 1096.61574993586 82.952 2 0.1489199638868941 0.0007045974986788797 0.0031000630955348983 ['ENSG00000171017|ENST00000306708|LRRC8E'] 35613 7097 GTDDGKVGLY True H1975_Epitope_Rep2 1023.48728979815 1023.4861899358599 32.23 2 0.14891650640674223 0.0007045974986788797 0.0031003100988056696 ['ENSG00000082516|ENST00000285873|GEMIN5'] 48872 9211 KEAIETIVAA True H1975_Epitope_Rep2 1043.5862755634298 1043.5857749679299 40.383 1 0.1489155985268099 0.0007045974986788797 0.0031003749612281647 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 39119 15252 HHYEGAVVIL True PC9_epitope_Rep3 1136.5978433066398 1136.59674993586 63.815 2 0.14890978915529765 0.0007045974986788797 0.003100790036968728 ['ENSG00000163655|ENST00000496455|GMPS'] 49853 7181 KIDEHHFVAV True PC9_epitope_Rep6 1193.6193070272102 1193.61766490379 36.703 3 0.14890973125354687 0.0007045974986788797 0.0031007941742887558 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 105676 16673 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.51187496793 69.367 1 0.14890895613929359 0.0007045974986788797 0.0031008495599431246 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 48476 5339 KAFNQGKIFK True NCI_RA007_Epitope_Rep2 1179.67642798051 1179.67477490379 25.387 3 0.14890871199703454 0.0007045974986788797 0.003100867005289747 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 43444 12526 IGGIGTVPVGR True PC9_epitope_Rep5 1024.6029286870798 1024.60182993586 53.18 2 0.14890553030765732 0.0007045974986788797 0.0031010943639402967 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 111630 15896 TIDQLYLEY True H1975_Epitope_Rep1 1156.5652057656798 1156.5641099358602 66.453 2 0.14889974799837633 0.0007045974986788797 0.0031015076013812073 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 9487 21717 AVVPGLLEV True PC9_epitope_Rep5 895.5378688190299 895.53676993586 88.572 2 0.1488961286943437 0.0007045974986788797 0.0031017662857773525 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 130926 15286 VTDGAFFDY True H1975_Epitope_Rep2 1033.43927697657 1033.43877496793 63.957 1 0.1488854807525282 0.0007045974986788797 0.00310252745617031 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 104055 4800 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44466993586 23.507 2 0.1488833160554247 0.0007045974986788797 0.003102682222741051 ['ENSG00000130935|ENST00000253247|NOL11'] 133362 18836 VVVGDLVEV True PC9_epitope_Rep6 927.5276980581499 927.52660993586 85.098 2 0.14888114360170887 0.0007045974986788797 0.0031028375516011725 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 27985 19216 FQIVNPHLL True PC9_epitope_Rep4 1079.61276509479 1079.6116699358602 82.015 2 0.14887697625598745 0.0007045974986788797 0.0031031355354502062 ['ENSG00000167325|ENST00000300738|RRM1'] 69547 13613 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45912496793 57.5 1 0.14887650620498277 0.0007045974986788797 0.0031031691479857042 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 43901 19016 IHYYEQITL True PC9_epitope_Rep5 1178.5971746002997 1178.5960699358602 78.171 2 0.1488755068892773 0.0007045974986788797 0.0031032406085298656 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4'] 92112 13715 RLASYLDKV True PC9_epitope_Rep1 1063.60259433391 1063.6014899358602 57.604 2 0.14887253821288857 0.0007045974986788797 0.0031034529066872873 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 9623 20397 AYANIISQF True PC9_epitope_Rep4 1025.5181960036098 1025.5170899358602 86.604 2 0.14886984735941644 0.0007045974986788797 0.003103645349457512 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 116257 11797 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 50.369 1 0.14886644017425393 0.0007045974986788797 0.0031038890394274477 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 8250 4664 ATGSVFTGK True NCI_RA007_Epitope_Rep4 866.4497820906199 866.44868993586 24.363 2 0.1488601576743586 0.0007045974986788797 0.0031043384286603766 ['ENSG00000126790|ENST00000247194|L3HYPDH'] 27820 15840 FQDENHLYL True PC9_epitope_Rep2 1177.54038800017 1177.53928993586 66.187 2 0.1488555963971651 0.0007045974986788797 0.0031046647388527316 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 138299 6049 YHDEADQSAL True PC9_epitope_Rep4 1147.47818166643 1147.47708993586 30.262 2 0.1488536652003859 0.0007045974986788797 0.0031048029054410475 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 6706 8814 AQAPDLQRV True PC9_epitope_Rep1 996.5352430500799 996.53414993586 38.745 2 0.1488529771790331 0.0007045974986788797 0.0031048521310917516 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 63560 15239 LMDHTIPEV True PC9_epitope_Rep2 1053.51648175145 1053.5153899358602 63.886 2 0.14885149753250718 0.0007045974986788797 0.0031049579975349784 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 64832 9439 LQDFFNGR True H1975_Epitope_Rep1 995.4824792012299 995.48138993586 41.222 2 0.1488492042015338 0.0007045974986788797 0.003105122088953471 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 38149 15912 HDDYLVMLK True PC9_epitope_Rep1 1132.5586809166 1132.55758993586 66.016 2 0.1488365034648103 0.0007045974986788797 0.00310603100279322 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 28149 21828 FRDFIPVVL True PC9_epitope_Rep5 1104.6331661861998 1104.63206993586 88.993 2 0.1488320388469809 0.0007045974986788797 0.0031063505710045404 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 76704 16661 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53856993586 68.915 2 0.14882562268515945 0.0007045974986788797 0.003106809884045325 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 106915 7444 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4494699358602 33.578 2 0.14881792958237722 0.0007045974986788797 0.0031073606984179853 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 138596 6468 YIDQEELNK True NCI_RA007_Epitope_Rep1 1150.5506183307 1150.5495299358602 29.179 2 0.14881112365564098 0.0007045974986788797 0.0031078480733652525 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 138557 13311 YIDAQFEAY True H1975_Epitope_Rep2 1118.49204082542 1118.49147496793 56.33 1 0.14880567971801856 0.0007045974986788797 0.0031082379705267044 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10'] 140942 10420 YSETATAIAY True H1975_Epitope_Rep2 1088.5026055091198 1088.5015099358602 45.093 2 0.14880299494013824 0.0007045974986788797 0.0031084302733999205 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 45853 8547 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.43850993586 37.831 2 0.14879860982643786 0.0007045974986788797 0.0031087443918726217 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 87769 11225 QRDETALQL True PC9_epitope_Rep2 1072.5512870370399 1072.55018993586 48.505 2 0.14879834295988706 0.0007045974986788797 0.003108763509321023 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 88538 5334 QTATQLLK True NCI_RA007_Epitope_Rep5 901.5232813840499 901.52218993586 27.209 2 0.1487972678532842 0.0007045974986788797 0.003108840527633024 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000485706.5_1_9:136216467-136216912:+|nuORF', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF', 'ENST00000437848.1_1_1:46117146-46117242:-|nuORF', 'ENST00000424559.2_1_22:19780074-19780431:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 8480 6231 ATQVAVSVPK True NCI_RA007_Epitope_Rep4 998.5760452328999 998.57494993586 30.574 2 0.14879535146720355 0.0007045974986788797 0.003108977818096644 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 77007 13414 NRHEIAVML True PC9_epitope_Rep1 1081.57024865981 1081.5691499358602 56.458 2 0.14879455181171033 0.0007045974986788797 0.003109035107435981 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10'] 49045 4260 KEGKPPISV True H1975_Epitope_Rep3 953.5545815123298 953.55348993586 21.504 2 0.14878819657879794 0.0007045974986788797 0.003109490449729277 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 41108 12004 HTVEDLVKV True PC9_epitope_Rep2 1038.5709598524597 1038.5698699358602 51.49 2 0.1487844641430724 0.0007045974986788797 0.0031097579037247993 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 135163 20559 WEMDNMLIQI True H1975_Epitope_Rep1 1291.59408044915 1291.59298993586 85.491 2 0.14878441464320002 0.0007045974986788797 0.003109761450875706 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 44360 7879 ILEGELER True NCI_RA007_Epitope_Rep1 957.5131106231698 957.51200993586 34.641 2 0.14876852678554262 0.0007045974986788797 0.0031109001796410705 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 49014 11478 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 52.266 2 0.1487654970772837 0.0007045974986788797 0.0031111173747111697 ['ENSG00000197747|ENST00000368811|S100A10'] 105494 17517 SRYPDQWIV True PC9_epitope_Rep4 1162.57710786206 1162.5760099358602 75.383 2 0.1487629557915423 0.0007045974986788797 0.003111299567168755 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 17646 11731 EHIVPNAEL True PC9_epitope_Rep4 1020.52400966004 1020.52290993586 52.885 2 0.14875948110947157 0.0007045974986788797 0.003111548694815214 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 117176 22256 TVLEQVLPI True PC9_epitope_Rep5 1010.6011973515798 1010.60010993586 90.615 2 0.14875354509070118 0.0007045974986788797 0.003111974341230048 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 88302 6098 QSEVESTEY True H1975_Epitope_Rep2 1070.44039917538 1070.4393099358601 28.433 2 0.1487521980618548 0.0007045974986788797 0.003112070938950306 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 127290 16452 VMAPRTVLL True PC9_epitope_Rep5 998.5946725024999 998.59356993586 68.28 2 0.14875207912402563 0.0007045974986788797 0.0031120794683268654 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 33394 14272 GLADASLLKKV True PC9_epitope_Rep2 1113.6757592741699 1113.67466993586 60.164 2 0.14874651837383687 0.0007045974986788797 0.0031124782718158868 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 62385 17319 LLGPRLVLA True PC9_epitope_Rep6 950.6276868829399 950.62658993586 79.231 2 0.14874370584971694 0.0007045974986788797 0.0031126799985767496 ['ENSG00000170348|ENST00000303575|TMED10'] 21902 16542 ESDLPDELLY True H1975_Epitope_Rep2 1192.54994962436 1192.54937496793 68.854 1 0.1487397486369064 0.0007045974986788797 0.0031129638495427784 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 21503 18606 ERLSYTQLL True PC9_epitope_Rep2 1121.6080736371698 1121.6069699358602 76.921 2 0.1487324816006108 0.0007045974986788797 0.0031134851813134873 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 38446 8733 HENPDIIIA True H1975_Epitope_Rep1 1020.52400966004 1020.52290993586 38.52 2 0.14873120446818822 0.0007045974986788797 0.003113576810818285 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000546869.1_1_12:113614643-113615134:-|nuORF'] 95788 18193 RYIFAKNLF True PC9_epitope_Rep2 1170.6549642599398 1170.65386993586 75.286 2 0.14871670726592376 0.0007045974986788797 0.003114617119346314 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 141666 22063 YTTDFIYQL True PC9_epitope_Rep2 1162.55464108198 1162.55354993586 90.337 2 0.14871271823848653 0.0007045974986788797 0.003114903429688072 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 32770 8238 GHDASQITL True PC9_epitope_Rep6 940.46140940348 940.46030993586 41.271 2 0.14870947484808175 0.0007045974986788797 0.003115136241630068 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 40474 8148 HRDGALTQL True PC9_epitope_Rep5 1009.53049202281 1009.52938993586 36.28 2 0.1487014613711032 0.0007045974986788797 0.0031157115266613232 ['ENSG00000127948|ENST00000461988|POR'] 135418 16548 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.5550749037902 68.656 3 0.14869718386422665 0.0007045974986788797 0.0031160186508338845 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 54683 20344 KYLTAEAFGF True PC9_epitope_Rep2 1145.5757108797297 1145.57460993586 83.675 2 0.1486958928622081 0.0007045974986788797 0.0031161113504493527 ['ENSG00000075618|ENST00000382361|FSCN1'] 135085 7289 WEDEGVRAC True H1975_Epitope_Rep3 1063.4392940599098 1063.43818993586 33.012 2 0.14869530974355422 0.0007045974986788797 0.0031161532218296917 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 141368 7078 YTEEDAASY True H1975_Epitope_Rep1 1047.40328539067 1047.4027749679299 32.252 1 0.14867669292508762 0.0007045974986788797 0.0031174903142177504 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 31378 10511 GDSVIVVLR True NCI_RA007_Epitope_Rep1 956.5654805492 956.56438993586 44.869 2 0.14867577573561616 0.0007045974986788797 0.0031175562031210426 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 103268 12634 SPLLLQAKA True PC9_epitope_Rep3 939.5753169569099 939.57420993586 53.619 2 0.14867555625793005 0.0007045974986788797 0.003117571970127696 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 8030 4201 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 21.267 2 0.14867277502512286 0.0007045974986788797 0.0031177717773413823 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 47083 21316 ITTDVLYTI True PC9_epitope_Rep2 1037.5644774896898 1037.5633899358602 87.456 2 0.14866113178469634 0.0007045974986788797 0.003118608380523892 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 9476 6774 AVVIVDDR True PC9_epitope_Rep6 885.4919812557699 885.49088993586 34.873 2 0.14866013022042412 0.0007045974986788797 0.0031186803564784583 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 41029 20084 HTILDLPAV True PC9_epitope_Rep2 977.55458151233 977.55348993586 82.661 2 0.14865936841098676 0.0007045974986788797 0.0031187351039086283 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 137229 15919 YAYTGVLQL True H1975_Epitope_Rep1 1026.53859709502 1026.53807496793 66.544 1 0.14865335650046788 0.0007045974986788797 0.003119167183374305 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 106938 13776 SVDSQILYY True H1975_Epitope_Rep2 1086.5233409537 1086.5222499358601 58.135 2 0.14864286856750575 0.0007045974986788797 0.003119921099758887 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 132029 8316 VTSTFIIEK True NCI_RA007_Epitope_Rep3 1036.5804619069997 1036.57936993586 39.83 2 0.14863909551872226 0.0007045974986788797 0.003120192366599473 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 118909 10096 VADLVENSY True H1975_Epitope_Rep1 1008.4763907612801 1008.47587496793 43.77 1 0.14863499626045623 0.0007045974986788797 0.0031204871131756107 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 77971 9822 NVNEFPVLK True H1975_Epitope_Rep1 1058.5760452328998 1058.57494993586 42.708 2 0.14863213302857042 0.0007045974986788797 0.0031206930029028285 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 128048 9951 VPKNSDPWAA True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 43.232 2 0.14863142515308675 0.0007045974986788797 0.0031207439070082233 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 115885 4885 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59746993586 23.875 2 0.14862733708257325 0.0007045974986788797 0.003121037900825305 ['ENSG00000204560|ENST00000376442|DHX16'] 78060 19021 NVVDVFHAV True PC9_epitope_Rep2 998.51853035678 998.51742993586 78.529 2 0.14862628929030913 0.0007045974986788797 0.003121113257301085 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 115725 8344 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.5853349679301 38.768 1 0.1486261576589858 0.0007045974986788797 0.0031211227242604277 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 23936 20945 EYLIVFPKL True PC9_epitope_Rep4 1120.6532329244399 1120.65212993586 88.724 2 0.1486214829453545 0.0007045974986788797 0.0031214589494201325 ['ENSG00000198060|ENST00000358935|MARCHF5'] 52849 12061 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54290993586 51.388 2 0.14861742646304893 0.0007045974986788797 0.0031217507379784244 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 63556 12425 LM[Oxidation]DHTIPEV True PC9_epitope_Rep5 1069.51139675145 1069.51028993586 52.792 2 0.14861661322850145 0.0007045974986788797 0.003121809238365513 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 4024 20550 AHFPINVVI True PC9_epitope_Rep1 1008.5756513100799 1008.57507496793 83.857 1 0.14861625213694588 0.0007045974986788797 0.0031218352139961037 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 63552 11785 LM[Oxidation]DHTIPEV True PC9_epitope_Rep2 1069.51139675145 1069.51028993586 50.663 2 0.1486128158444268 0.0007045974986788797 0.003122082419310107 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 133827 13304 VYGFLRNGF True NCI_RA007_Epitope_Rep4 1071.5501648382299 1071.5490699358602 58.316 2 0.14861220709251186 0.0007045974986788797 0.003122126214675825 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 35392 15107 GSDEPAFMYY True H1975_Epitope_Rep1 1178.45902644498 1178.45847496793 63.363 1 0.14861217327175688 0.0007045974986788797 0.003122128647856253 ['ENSG00000155096|ENST00000337198|AZIN1'] 664 10085 AATKILTEL True H1975_Epitope_Rep1 958.5698972233 958.56880993586 43.728 2 0.1486104373826224 0.0007045974986788797 0.0031222535361732813 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'MAP7D3|p.H864Qfs*2|1|0.07|ENSG00000129680|chrX:136219469-136219470|-/T|frameshift_variant', 'ENSG00000129680|ENST00000316077|MAP7D3'] 10073 8761 AYSVEHNQL True PC9_epitope_Rep5 1059.49852318819 1059.49742993586 38.641 2 0.14860093767925597 0.0007045974986788797 0.0031229370791395327 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 91372 18916 RHDDYLVML True PC9_epitope_Rep5 1160.5648289262 1160.56372993586 77.781 2 0.1486002198091665 0.0007045974986788797 0.0031229887389142594 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 71925 5830 [Acetylation]-M[Oxidation]EQLSSANTR True H1975_Epitope_Rep3 1193.5346516934699 1193.53354993586 27.446 2 0.1485973665915191 0.0007045974986788797 0.0031231940721884485 ['ENSG00000021355|ENST00000380739|SERPINB1'] 38864 6357 HHDSHSSVIL True PC9_epitope_Rep1 1130.5468703629401 1130.54521490379 29.261 3 0.14859135061114478 0.0007045974986788797 0.003123627059334527 ['ENSG00000129315|ENST00000261900|CCNT1'] 47928 12676 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.68958993586 54.066 2 0.14859078893970853 0.0007045974986788797 0.0031236674874672455 ['ENSG00000103479|ENST00000262133|RBL2'] 60605 5724 LHHDDPEVL True PC9_epitope_Rep6 1073.51417325233 1073.5130699358601 30.169 2 0.14859077027329523 0.0007045974986788797 0.0031236688310521377 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 26384 11873 FHVEPGLQRL True PC9_epitope_Rep6 1194.6509415086598 1194.6493049037902 56.888 3 0.14859033485721826 0.0007045974986788797 0.0031237001719154624 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 29332 20035 FVDEYDPTI True PC9_epitope_Rep1 1097.49170647225 1097.4906099358602 81.892 2 0.14858723484745784 0.0007045974986788797 0.0031239233169154043 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 49436 7874 KEYAVNEVVA True NCI_RA007_Epitope_Rep2 1120.57643915572 1120.57534993586 35.26 2 0.1485781796445701 0.0007045974986788797 0.0031245752196581377 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 130449 19061 VSNPVDILTYV True H1975_Epitope_Rep3 1218.64960409598 1218.6485099358601 79.928 2 0.14857648610919588 0.0007045974986788797 0.003124697155790233 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 87307 11809 QPQPQPYAV True PC9_epitope_Rep5 1026.5134449763398 1026.5123499358601 50.419 2 0.1485710129854853 0.0007045974986788797 0.0031250912582008873 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 6642 19392 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 79.815 2 0.14856323778625916 0.0007045974986788797 0.0031256512108692714 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 3923 8126 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 40.794 2 0.1485604302943636 0.0007045974986788797 0.003125853424765111 ['ENSG00000075618|ENST00000382361|FSCN1'] 130152 10393 VSDTVVEPY True NCI_RA007_Epitope_Rep1 1007.4811417885498 1007.48057496793 44.409 1 0.1485571980828 0.0007045974986788797 0.003126086245865438 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 49147 2859 KELEKTYSA True H1975_Epitope_Rep1 1067.54989005471 1067.5487899358602 14.604 2 0.14855569960925108 0.0007045974986788797 0.003126194189041804 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 74825 7789 NHDYSYTV True PC9_epitope_Rep4 997.4141248578901 997.41302993586 37.36 2 0.14854508511487274 0.0007045974986788797 0.003126958914831975 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 2159 5890 AELQSRLAA True H1975_Epitope_Rep2 957.5243440132099 957.52324993586 27.641 2 0.14854101334815245 0.0007045974986788797 0.0031272523164048373 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 130128 9459 VSDRVTVLY True H1975_Epitope_Rep2 1050.57095985246 1050.5698699358602 41.352 2 0.14853989980362037 0.0007045974986788797 0.0031273325604764873 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 130997 10232 VTDPSTLEQY True H1975_Epitope_Rep2 1151.53463391339 1151.5340749679299 44.362 1 0.1485358414819906 0.0007045974986788797 0.0031276250279553444 ['ENSG00000197081|ENST00000356956|IGF2R'] 26691 21372 FIVDPVSNL True PC9_epitope_Rep2 1002.53859709502 1002.53750993586 87.676 2 0.14853508595181247 0.0007045974986788797 0.003127679479086127 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 25404 11835 FEDENFILK True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 50.52 2 0.1485261070093485 0.0007045974986788797 0.0031283266645366343 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 9250 16149 AVPEIMDRI True PC9_epitope_Rep6 1042.5481162329 1042.5470099358602 74.468 2 0.14852520401774655 0.0007045974986788797 0.003128391757863718 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 77935 8965 NVKVDPEIQ True PC9_epitope_Rep3 1040.5502244078798 1040.54912993586 39.431 2 0.14852297841377046 0.0007045974986788797 0.003128552199183093 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 140308 13077 YRDENLVTI True PC9_epitope_Rep6 1121.57168812845 1121.5705899358602 61.907 2 0.1485133580358512 0.0007045974986788797 0.0031292458157403703 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5', 'ENST00000502747.1_1_5:79454657-79462329:-|nuORF'] 9750 7067 AYHNSPAYL True NCI_RA007_Epitope_Rep4 1034.48214484806 1034.48104993586 33.808 2 0.1485123743576617 0.0007045974986788797 0.0031293167462627053 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 2511 8821 AEQNTQITSI True H1975_Epitope_Rep3 1103.54586730343 1103.5447699358601 38.937 2 0.14851176336112037 0.0007045974986788797 0.003129360804468549 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28129 16230 FRAPQVMTY True PC9_epitope_Rep5 1111.54845058607 1111.5473499358602 67.417 2 0.14851116679420384 0.0007045974986788797 0.0031294038227675245 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263', 'CCDC113|p.V325I|1|0.42|ENSG00000103021|chr16:58278563-58278563|G/A|missense_variant'] 21425 17312 ERIQDYDVSL True PC9_epitope_Rep1 1236.5986311522797 1236.5975299358602 71.407 2 0.14850437323630733 0.0007045974986788797 0.003129893746124973 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 106365 19887 STIAILNSV True PC9_epitope_Rep4 916.5229470308801 916.52184993586 84.628 2 0.14850132022015355 0.0007045974986788797 0.003130113941905382 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 97243 9597 SEADIRGFVA True H1975_Epitope_Rep1 1063.52982331647 1063.5287299358602 41.84 2 0.14850034782578808 0.0007045974986788797 0.00313018407812707 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 99047 18011 SHFSEEVLL True PC9_epitope_Rep1 1059.52367530687 1059.52256993586 74.072 2 0.1484996033579223 0.0007045974986788797 0.003130237775672914 ['ENSG00000110628|ENST00000649076|SLC22A18'] 53657 8641 KSDGSFIGY True H1975_Epitope_Rep3 972.4552613938799 972.45416993586 38.233 2 0.14849495728617332 0.0007045974986788797 0.003130572911789422 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2', 'ENST00000537834.5_1_19:40745726-40771198:-|nuORF'] 2098 10249 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 44.428 1 0.14849076208647125 0.0007045974986788797 0.003130875555728014 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 1880 10470 AEIEETLQAA True H1975_Epitope_Rep2 1073.5240692296898 1073.5229699358601 45.29 2 0.14848752704994947 0.0007045974986788797 0.0031311089528647494 ['ENSG00000176903|ENST00000316836|PNMA1'] 111159 15930 THGIFTIST True PC9_epitope_Rep1 975.5025459394701 975.50144993586 66.084 2 0.14848493531826376 0.0007045974986788797 0.003131295950186082 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 84815 7923 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.46472993586 35.421 2 0.14848046519093389 0.0007045974986788797 0.0031316185026784276 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 115417 19679 TRLPIDVQL True PC9_epitope_Rep2 1053.61824439805 1053.6171499358602 81.082 2 0.14848022954747342 0.0007045974986788797 0.003131635507000784 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 121700 11421 VFLENVIR True NCI_RA007_Epitope_Rep3 988.5705659296399 988.56946993586 52.05 2 0.14847893680152086 0.0007045974986788797 0.0031317287947756206 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 72024 8187 METDPQTISA True H1975_Epitope_Rep2 1091.48049016555 1091.47997496793 36.442 1 0.14847787968306048 0.0007045974986788797 0.0031318050811375672 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 29478 12180 FVEWIPNNVK True H1975_Epitope_Rep3 1244.65535818276 1244.6542699358602 52.021 2 0.14846427449705366 0.0007045974986788797 0.0031327870568249577 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 83316 11269 PTDYADIM[Oxidation]M[Oxidation]GY True H1975_Epitope_Rep2 1307.50499142211 1307.5038899358601 48.39 2 0.1484571423403684 0.0007045974986788797 0.003133301953841269 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 26742 5605 FKDLGEEHFK True H1975_Epitope_Rep3 1248.6138872935996 1248.61225490379 26.6 3 0.14845653350693286 0.0007045974986788797 0.003133345911700658 ['CON__P02769'] 104129 4849 SQEGRPVQV True PC9_epitope_Rep5 998.5145076054997 998.51340993586 23.693 2 0.14845452373798432 0.0007045974986788797 0.003133491021656671 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 76804 6011 NRAPNTAEL True PC9_epitope_Rep3 984.4988575413599 984.49776993586 28.174 2 0.1484531463316948 0.0007045974986788797 0.003133590477431352 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 75810 20958 NLNPEFISV True PC9_epitope_Rep5 1031.5287606873098 1031.52817496793 85.675 1 0.14845282484513395 0.0007045974986788797 0.0031336136908564284 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 68636 21936 LTIEDGIFEV True PC9_epitope_Rep4 1134.58085582982 1134.57974993586 92.587 2 0.1484526402099988 0.0007045974986788797 0.003133627022793956 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 105864 8219 SSNIFTVAK True NCI_RA007_Epitope_Rep4 965.51819600361 965.51708993586 38.402 2 0.14845013595719067 0.0007045974986788797 0.003133807852792347 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.Q878H|1|0.06|ENSG00000100280|chr22:29330510-29330510|C/G|missense_variant', 'ENST00000482818.1_1_22:29726183-29727937:-|nuORF'] 43682 16533 IHDGMNLEL True PC9_epitope_Rep2 1040.49608066004 1040.49498993586 68.833 2 0.14844956872701792 0.0007045974986788797 0.0031338488134504488 ['ENSG00000198258|ENST00000586895|UBL5'] 117488 11859 TVRETVNVI True PC9_epitope_Rep4 1029.5818588893299 1029.5807699358602 53.392 2 0.14844931379919318 0.0007045974986788797 0.003133867222396931 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101'] 47868 15979 IYIAGHPAF True PC9_epitope_Rep1 987.51780208079 987.51670993586 66.272 2 0.14844392019121053 0.0007045974986788797 0.003134256732921111 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 92717 4858 RNVSTGDVNVE True H1975_Epitope_Rep2 1188.5734790335998 1188.5723899358602 23.773 2 0.1484429515988159 0.0007045974986788797 0.003134326686920564 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 127032 9434 VLSIGDGIAR True H1975_Epitope_Rep3 999.5712942056299 999.57018993586 41.289 2 0.14843967552194287 0.0007045974986788797 0.00313456330433924 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 130073 8507 VSDFRKEFY True H1975_Epitope_Rep2 1189.5767735088898 1189.57513490379 37.676 3 0.14843462225935858 0.0007045974986788797 0.0031349283153497653 ['nc|ENSG00000093009|O75419-2|CDC45', 'ENSG00000093009|ENST00000263201|CDC45', 'nc|ENSG00000093009|O75419-3|CDC45', 'ENST00000491520.5_1_22:19467485-19467677:+|nuORF'] 5373 8653 ALSGHLETV True PC9_epitope_Rep4 925.48689587533 925.48578993586 40.776 2 0.14843413499309968 0.0007045974986788797 0.003134963514163192 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 17186 14528 EGSPIKVTL True PC9_epitope_Rep2 942.53859709502 942.53750993586 61.155 2 0.14842954432090444 0.0007045974986788797 0.0031352951513700443 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF'] 63566 15822 LMDHTIPEV True PC9_epitope_Rep5 1053.51648175145 1053.5153899358602 65.851 2 0.1484283556326741 0.0007045974986788797 0.0031353810297223314 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 9104 18905 AVIKGLTYL True PC9_epitope_Rep5 976.5957180483199 976.59462993586 77.74 2 0.14842828595248544 0.0007045974986788797 0.0031353860639322796 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1'] 105115 13502 SREPSQVIF True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 56.986 2 0.14842624151566597 0.0007045974986788797 0.0031355337726831365 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 139940 20863 YQAPDIDVQL True PC9_epitope_Rep5 1160.57135377528 1160.5702499358601 85.301 2 0.14842405770785766 0.0007045974986788797 0.003135691558512785 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 134188 22943 VYLPPEAFTF True PC9_epitope_Rep5 1182.5961119711399 1182.5950099358602 93.239 2 0.14842083732192973 0.0007045974986788797 0.003135924254240606 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 111061 14984 THDITTISI True PC9_epitope_Rep2 999.52367530687 999.52256993586 62.893 2 0.14841633878232327 0.0007045974986788797 0.0031362493344038733 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 71200 18138 LYPDHFHLL True PC9_epitope_Rep2 1153.59202965021 1153.59092993586 75.071 2 0.14841545810902118 0.0007045974986788797 0.0031363129788532086 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 9288 9726 AVQEFGLARFK True NCI_RA007_Epitope_Rep4 1264.6928063206399 1264.6917099358602 44.256 2 0.14841537771494126 0.0007045974986788797 0.0031363187888321276 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 128784 18124 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 74.724 2 0.1484011596871662 0.0007045974986788797 0.003137346476242682 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 62375 19709 LLGPRLVLA True PC9_epitope_Rep1 950.6276868829399 950.62658993586 80.636 2 0.14839478996704322 0.0007045974986788797 0.0031378069920355036 ['ENSG00000170348|ENST00000303575|TMED10'] 77380 9250 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.4600299358601 40.536 2 0.14839459510520045 0.0007045974986788797 0.0031378210811489502 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 55004 17528 KYQIINEEF True PC9_epitope_Rep5 1182.5920892198599 1182.59098993586 72.427 2 0.1483917975237708 0.0007045974986788797 0.0031380233618713547 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 21025 15613 EQSRIITVL True PC9_epitope_Rep2 1057.6131590176099 1057.61206993586 65.333 2 0.14837578551687633 0.0007045974986788797 0.003139181368852957 ['ENSG00000158006|ENST00000374282|PAFAH2'] 23980 13571 EYMEHVYLI True NCI_RA007_Epitope_Rep5 1195.5583465634297 1195.55724993586 58.889 2 0.14837513312327075 0.0007045974986788797 0.0031392285597322492 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 90826 9075 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.54912993586 39.892 2 0.1483729034629594 0.0007045974986788797 0.003139389847498056 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 66165 10335 LSEPSSLQY True H1975_Epitope_Rep3 1022.49204082542 1022.4909499358599 44.805 2 0.1483701591999199 0.0007045974986788797 0.0031395883715920345 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 61259 4379 LIPAANTGESK True H1975_Epitope_Rep3 1099.58733819259 1099.58624993586 21.964 2 0.14836104870864006 0.0007045974986788797 0.0031402475277360364 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 95186 20060 RVIDYILDL True PC9_epitope_Rep6 1118.63356010902 1118.6324699358602 89.827 2 0.14836054425565817 0.0007045974986788797 0.003140284029602329 ['ENSG00000117318|ENST00000374561|ID3'] 78499 19551 NYNQHAMVFF True PC9_epitope_Rep2 1269.5600778989299 1269.5589899358602 80.586 2 0.1483535890526061 0.0007045974986788797 0.0031407873462891995 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 114706 13895 TQIDHYVGI True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 61.348 2 0.14834100420550028 0.0007045974986788797 0.0031416982589593926 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 137417 8103 YEAQDPEIA True H1975_Epitope_Rep3 1034.4556553166997 1034.45507496793 36.143 1 0.14834071835013918 0.0007045974986788797 0.003141718952710314 ['ENSG00000111678|ENST00000229281|C12orf57'] 9066 15847 AVIDVGINRV True PC9_epitope_Rep2 1054.61349337078 1054.6123899358602 66.215 2 0.1483398783107686 0.0007045974986788797 0.003141779765947475 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 100648 5605 SLDGVTNDR True PC9_epitope_Rep1 975.4621376794701 975.46104993586 26.387 2 0.14833395500004967 0.0007045974986788797 0.0031422086073112187 ['ENSG00000172893|ENST00000355527|DHCR7', 'DHCR7|p.T23A|1|0.14|ENSG00000172893|chr11:71444886-71444886|T/C|missense_variant', 'ENST00000529990.5_2_11:71155902-71158661:-|nuORF'] 27984 19924 FQIVNPHLL True PC9_epitope_Rep2 1079.61276509479 1079.6116699358602 82.035 2 0.14833345881798587 0.0007045974986788797 0.0031422445330058567 ['ENSG00000167325|ENST00000300738|RRM1'] 135081 7235 WEDEGVRAC True H1975_Epitope_Rep2 1063.4392940599098 1063.43818993586 32.763 2 0.1483224873704486 0.0007045974986788797 0.0031430390169725755 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 95893 21698 RYLDLFTNF True PC9_epitope_Rep2 1187.59750895347 1187.59640993586 88.939 2 0.14832218196550642 0.0007045974986788797 0.003143061135357325 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.Y111*|1|0.1|ENSG00000100196|chr22:38479732-38479733|AC/-|frameshift_variant'] 115261 12799 TREEGVLTL True PC9_epitope_Rep4 1016.5502244078798 1016.54912993586 57.092 2 0.14831820476260568 0.0007045974986788797 0.0031433491910195957 ['ENSG00000108528|ENST00000225665|SLC25A11', 'nc|ENSG00000108528|Q02978-2|SLC25A11', 'ENST00000574710.1_1_17:4841038-4842521:-|nuORF', 'ENST00000570543.1_1_17:4841583-4841851:-|nuORF'] 126315 20528 VLIGEFLEKV True PC9_epitope_Rep4 1145.66961126457 1145.6685099358601 87.112 2 0.14831777246786945 0.0007045974986788797 0.003143380502281376 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 118053 23121 TYFSTPLLL True PC9_epitope_Rep1 1053.57464825057 1053.57354993586 93.729 2 0.14830877534905743 0.0007045974986788797 0.0031440322372486723 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 1865 12122 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.4856749679301 51.795 1 0.14830828391220321 0.0007045974986788797 0.0031440678399152844 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 96372 20438 RYVIIPTTF True PC9_epitope_Rep1 1108.6280808057597 1108.6269899358601 83.427 2 0.14830729249236427 0.0007045974986788797 0.003144139665602968 ['ENSG00000149260|ENST00000648180|CAPN5', 'ENST00000527129.1_1_11:76831698-76834913:+|nuORF'] 21374 9530 ERHPQTIVL True PC9_epitope_Rep5 1091.60874234351 1091.60764993586 41.616 2 0.1483029653053182 0.0007045974986788797 0.0031444531777229797 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 92823 14359 RPAQPTLWTA True PC9_epitope_Rep5 1139.60874234351 1139.60764993586 60.233 2 0.14830066159088012 0.0007045974986788797 0.0031446200984710754 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 29561 14619 FVIDLQTRL True H1975_Epitope_Rep2 1103.63389446219 1103.63278993586 61.392 2 0.14829616959849665 0.0007045974986788797 0.003144945601116073 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 72897 19037 MPTLPPPSV True PC9_epitope_Rep2 937.49428975489 937.49318993586 78.591 2 0.14829514722499074 0.0007045974986788797 0.0031450196899142904 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 111971 3998 TIQSGEQPYK True NCI_RA007_Epitope_Rep3 1149.56660274801 1149.56550993586 22.144 2 0.14828782065079735 0.0007045974986788797 0.003145550678861449 ['ENSG00000168653|ENST00000372969|NDUFS5'] 106568 5519 STMSTNGIPR True NCI_RA007_Epitope_Rep5 1062.51279335334 1062.5116899358602 27.916 2 0.14827599397059904 0.0007045974986788797 0.0031464079984303154 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 103277 10583 SPLLLQAKA True PC9_epitope_Rep6 939.5753169569099 939.57420993586 51.522 2 0.14827413257410843 0.0007045974986788797 0.0031465429527897655 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 94893 6213 RTDTGEITSY True H1975_Epitope_Rep2 1141.5251318588498 1141.5240299358602 28.868 2 0.14827305710604188 0.0007045974986788797 0.0031466209286487978 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 55225 10386 LADDSVRSL True PC9_epitope_Rep5 974.50327421546 974.50216993586 44.933 2 0.14827192745621764 0.0007045974986788797 0.0031467028349785376 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 6895 3859 AQIENSAAVQK True NCI_RA007_Epitope_Rep2 1157.6040508858898 1157.6029499358601 19.645 2 0.14826999243192054 0.0007045974986788797 0.00314684314067574 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 6756 17056 AQDEHLITF True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 70.624 2 0.14826929556270585 0.0007045974986788797 0.0031468936711373297 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 91653 14842 RISLPLPNF True NCI_RA007_Epitope_Rep3 1055.61276509479 1055.6116699358602 65.81 2 0.14826810196517237 0.0007045974986788797 0.00314698022158338 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 93899 19729 RRFMQTFVL True PC9_epitope_Rep1 1196.64883333368 1196.64718490379 80.715 3 0.14825556664477893 0.0007045974986788797 0.0031478893289687026 ['G3BP1|p.A115S|1|0.19|ENSG00000145907|chr5:151791054-151791054|G/T|missense_variant', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 45555 6421 IQRTPKIQVYS True H1975_Epitope_Rep2 1331.75613485319 1331.7544949037901 29.618 3 0.148251358035527 0.0007045974986788797 0.0031481946113277874 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 33973 11710 GLSQSALPYR True PC9_epitope_Rep5 1090.5771078620598 1090.5760099358602 50.041 2 0.14824953993625736 0.0007045974986788797 0.003148326500972658 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 135423 20251 WHIDTILHV True PC9_epitope_Rep5 1132.60292868708 1132.60182993586 82.945 2 0.1482491343730945 0.0007045974986788797 0.0031483559223281785 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000556741.5_1_14:24032738-24033292:-|nuORF'] 35670 7104 GTEDELDKY True H1975_Epitope_Rep3 1068.46113461996 1068.4600299358601 32.295 2 0.14823916630578746 0.0007045974986788797 0.0031490791362587607 ['nc|ENSG00000167460|P67936-2|TPM4', 'TPM3|p.K113Sfs*16|1|0.53|ENSG00000143549|chr1:154176154-154176154|T/-|frameshift_variant', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 97958 11126 SENPSVYVP True NCI_RA007_Epitope_Rep1 990.4658260775799 990.4652749679301 47.278 1 0.14823795619541383 0.0007045974986788797 0.0031491669447374472 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 6936 11491 AQIKEM[Oxidation]VEL True PC9_epitope_Rep5 1075.55834694387 1075.55724993586 49.196 2 0.14823791116203192 0.0007045974986788797 0.0031491702125134584 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 84967 11975 QEEPGQLLP True H1975_Epitope_Rep2 1009.5080252427299 1009.50692993586 51.143 2 0.1482363877477446 0.0007045974986788797 0.0031492807586451462 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF', 'ENST00000566424.1_1_16:29468907-29469081:+|nuORF', 'ENST00000395400.4_1_16:29468907-29472819:+|nuORF', 'nc|ENSG00000181625|Q9BQ83-2|SLX1A', 'ENST00000561824.5_1_16:30205929-30212162:+|nuORF', 'ENSG00000181625|ENST00000330181|SLX1B', 'ENSG00000132207|ENST00000251303|SLX1A'] 132207 16818 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 69.939 2 0.14823613873226663 0.0007045974986788797 0.003149298828750794 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 134383 18727 VYPEYVIQY True PC9_epitope_Rep6 1172.57537652656 1172.57426993586 84.674 2 0.148231864468378 0.0007045974986788797 0.003149609011898977 ['ENSG00000059378|ENST00000263549|PARP12'] 77791 18171 NTTDIFQTV True PC9_epitope_Rep6 1037.50293986229 1037.50184993586 82.536 2 0.14822901172032724 0.0007045974986788797 0.0031498160526172445 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 104268 16185 SQIEADFRL True PC9_epitope_Rep6 1077.54547338061 1077.54436993586 74.61 2 0.14822269312358616 0.0007045974986788797 0.0031502746785896083 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 90326 4864 REFDRRFSP True NCI_RA007_Epitope_Rep3 1208.6050539453997 1208.60341490379 26.117 3 0.14822154189651351 0.0007045974986788797 0.0031503582458542803 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 31049 7180 GATEITTTITK True NCI_RA007_Epitope_Rep1 1134.61321858726 1134.6121299358601 31.917 2 0.1482209563653095 0.0007045974986788797 0.0031504007502536377 ['CON__ENSEMBL:ENSBTAP00000024146'] 1132 6435 AEAPPGVET True H1975_Epitope_Rep3 869.41306222873 869.4125149679301 29.728 1 0.14820320517544203 0.0007045974986788797 0.0031516896009082256 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 42265 18328 IDTIEIITDR True PC9_epitope_Rep2 1187.63976768827 1187.6386699358602 75.828 2 0.148199207131477 0.0007045974986788797 0.003151979957014005 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 72116 11713 M[Oxidation]FLSFPTTK True NCI_RA007_Epitope_Rep4 1086.54196860374 1086.5408699358602 52.022 2 0.1481962155513071 0.0007045974986788797 0.003152197236557006 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 107907 13635 SVVSDILFK True NCI_RA007_Epitope_Rep3 1006.5698972233 1006.56880993586 60.934 2 0.14818779472761204 0.0007045974986788797 0.0031528089240238154 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 29343 20383 FVDFNDPNF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 86.548 2 0.14818455871835728 0.0007045974986788797 0.0031530440186986076 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 104110 4851 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.527 2 0.14818297465154787 0.0007045974986788797 0.00315315910682674 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 98066 8356 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 37.125 1 0.1481778602793914 0.0007045974986788797 0.0031535307128163713 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 24115 14903 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep3 1300.57578791316 1300.57468993586 62.461 2 0.14817467663558298 0.0007045974986788797 0.003153762055707839 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 74952 20064 NHMAVAFVL True PC9_epitope_Rep5 1000.5164221818 1000.51532993586 82.229 2 0.14816658001440888 0.0007045974986788797 0.0031543504814484534 ['ENSG00000164919|ENST00000520468|COX6C'] 118598 16438 TYRNVMEQF True PC9_epitope_Rep1 1186.54409348162 1186.54298993586 68.052 2 0.14816594612028905 0.0007045974986788797 0.003154396554611321 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 3262 4765 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.43990993586 25.013 2 0.14816512867669204 0.0007045974986788797 0.003154455969641943 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 69639 18970 LVDQNIFSFY True H1975_Epitope_Rep1 1244.607739284 1244.60664993586 79.095 2 0.14816054352709 0.0007045974986788797 0.0031547892570716832 ['ENSG00000117984|ENST00000236671|CTSD'] 41509 16560 HYMSINDSF True PC9_epitope_Rep3 1112.45969515132 1112.4585899358601 68.839 2 0.1481541661502843 0.0007045974986788797 0.003155252876978046 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 57660 2726 LEEERTPTP True H1975_Epitope_Rep2 1070.52440358286 1070.5233099358602 14.568 2 0.1481500934445569 0.0007045974986788797 0.0031555489883250093 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 74623 17147 NGISDLVKV True PC9_epitope_Rep4 943.53384606775 943.53274993586 73.963 2 0.14814913556966863 0.0007045974986788797 0.003155618635875841 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 63567 15914 LMDHTIPEV True PC9_epitope_Rep5 1053.51648175145 1053.5153899358602 66.205 2 0.1481478194486363 0.0007045974986788797 0.003155714334173144 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 40769 15127 HRTEMDWVL True PC9_epitope_Rep6 1185.5600778989299 1185.55843490379 70.248 3 0.1481464948488431 0.0007045974986788797 0.003155810651896781 ['ENSG00000169813|ENST00000682386|HNRNPF'] 66163 10408 LSEPSSLQY True H1975_Epitope_Rep2 1022.49204082542 1022.49147496793 45.048 1 0.14814410659948213 0.0007045974986788797 0.0031559843198477214 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 106318 9033 STFSEIFKK True NCI_RA007_Epitope_Rep4 1085.57571087973 1085.57460993586 41.578 2 0.14814078015015944 0.0007045974986788797 0.003156226227368088 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 78478 14017 NYNEKIYEL True PC9_epitope_Rep4 1184.5713537752797 1184.5702499358601 61.829 2 0.14814067415804064 0.0007045974986788797 0.0031562339356771456 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 87949 18094 QRLINLVGESL True PC9_epitope_Rep6 1240.7139356880398 1240.71282993586 82.234 2 0.14813890501612467 0.0007045974986788797 0.003156362599826202 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 90553 6927 REM[Oxidation]EENFAV True H1975_Epitope_Rep2 1139.49172393603 1139.4906299358602 31.566 2 0.14813841167029082 0.0007045974986788797 0.0031563984802536033 ['ENSG00000026025|ENST00000544301|VIM'] 4206 5458 AIAQAESLRYK True NCI_RA007_Epitope_Rep3 1248.6826355597598 1248.68098490379 28.479 3 0.14813296175083795 0.0007045974986788797 0.0031567948731038614 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 50010 9545 KIYEGQVEV True PC9_epitope_Rep6 1063.55497543515 1063.5538699358601 47.0 2 0.1481315425861828 0.0007045974986788797 0.0031568981023390352 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 28962 9624 FTDVIGHY True H1975_Epitope_Rep1 950.4497820906199 950.44868993586 41.945 2 0.14812443446714074 0.0007045974986788797 0.003157415193442122 ['ENSG00000090432|ENST00000264198|MUL1'] 33985 13542 GLSTEGIYRV True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 59.985 2 0.14811599450345356 0.0007045974986788797 0.003158029281073618 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 95673 19225 RYFDVGLHNF True PC9_epitope_Rep1 1266.6145559999397 1266.6129149037902 78.747 3 0.1481138887829165 0.0007045974986788797 0.0031581825107911384 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 62123 4948 LLEGEEER True NCI_RA007_Epitope_Rep2 973.4716397340098 973.47054993586 23.867 2 0.14811020242019235 0.0007045974986788797 0.0031584507789737906 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF', 'ENSG00000176619|ENST00000325327|LMNB2', 'ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF'] 32232 5980 GEYIIRQGA True NCI_RA007_Epitope_Rep3 1005.5243440132098 1005.52324993586 30.503 2 0.1481061371060491 0.0007045974986788797 0.0031587466509279093 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'ENST00000373975.2_1_10:53806680-53893656:+|nuORF'] 78503 15781 NYPDEFTKL True PC9_epitope_Rep4 1125.53423999057 1125.5331499358601 68.627 2 0.1481051091890658 0.0007045974986788797 0.0031588214666866438 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant', 'NF1|p.P1951Hfs*6|1|0.17|ENSG00000196712|chr17:31334876-31334876|C/-|frameshift_variant', 'NF1|p.E1929Sfs*13|1|0.24|ENSG00000196712|chr17:31330469-31330469|A/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'NF1|p.E1832*|1|0.19|ENSG00000196712|chr17:31327723-31327724|-/T|frameshift_variant', 'NF1|p.E318Kfs*11|1|0.07|ENSG00000196712|chr17:31200484-31200485|AG/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.L1411Sfs*17|1|0.08|ENSG00000196712|chr17:31258400-31258400|C/-|frameshift_variant', 'NF1|p.Q1360Sfs*20|1|0.19|ENSG00000196712|chr17:31249085-31249086|-/T|frameshift_variant', 'NF1|p.A1268Qfs*17|1|0.22|ENSG00000196712|chr17:31235703-31235703|G/-|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.G1160Vfs*6|1|0.31|ENSG00000196712|chr17:31232863-31232863|G/-|frameshift_variant', 'NF1|p.S637Vfs*51|1|0.23|ENSG00000196712|chr17:31225157-31225157|T/-|frameshift_variant', 'NF1|p.F1464Sfs*5|1|0.41|ENSG00000196712|chr17:31259088-31259088|T/-|frameshift_variant', 'nc|ENSG00000196712|P21359-5|NF1'] 8932 13758 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6965849037902 57.942 3 0.1480880524358245 0.0007045974986788797 0.0031600631802856643 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 65805 12622 LSDISVVSNY True H1975_Epitope_Rep2 1095.54480467427 1095.54427496793 53.648 1 0.1480862756594441 0.0007045974986788797 0.003160192555652105 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 90065 7972 REAEEPVFAA True H1975_Epitope_Rep2 1117.54038800017 1117.53928993586 35.611 2 0.14808375809037677 0.0007045974986788797 0.0031603758806089967 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 97512 5029 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 24.424 1 0.14807007739444117 0.0007045974986788797 0.0031613722698366343 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 47982 18293 IYKFITERF True PC9_epitope_Rep1 1215.6651945904698 1215.66355490379 75.153 3 0.1480660994189894 0.0007045974986788797 0.0031616620514549405 ['ENSG00000178919|ENST00000375123|FOXE1'] 17230 15495 EHAEALLL True PC9_epitope_Rep1 894.4810822188999 894.47998993586 64.423 2 0.1480591008624765 0.0007045974986788797 0.003162171936000425 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 115623 13235 TRVGMSVNAL True PC9_epitope_Rep5 1046.5542642425 1046.55316993586 55.916 2 0.14805438747982763 0.0007045974986788797 0.0031625153787670185 ['ENSG00000171703|ENST00000343484|TCEA2', 'nc|ENSG00000171703|Q15560-2|TCEA2'] 75044 9949 NHSNQFTQL True PC9_epitope_Rep1 1087.50467119779 1087.50356993586 43.131 2 0.14804858229534193 0.0007045974986788797 0.0031629384271712256 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A'] 9035 12012 AVHEDIVAV True PC9_epitope_Rep1 951.5025459394699 951.50144993586 51.065 2 0.1480446896042275 0.0007045974986788797 0.0031632221356096453 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 88177 15255 QRVPLSVQL True PC9_epitope_Rep4 1038.61857875122 1038.61748993586 66.608 2 0.14804173663476047 0.0007045974986788797 0.0031634373718228315 ['ENSG00000125826|ENST00000356286|RBCK1'] 137450 5296 YEDM[Oxidation]AAFM[Oxidation]K True H1975_Epitope_Rep3 1136.4518336504398 1136.4507299358602 25.45 2 0.1480415831383313 0.0007045974986788797 0.0031634485602780055 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 140173 16260 YQTEIGQTL True PC9_epitope_Rep3 1051.51858992643 1051.51807496793 67.681 1 0.14803747531515185 0.0007045974986788797 0.003163747996822865 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 71269 22493 LYPSIIQEF True PC9_epitope_Rep1 1108.580461907 1108.57936993586 91.319 2 0.14803736637711964 0.0007045974986788797 0.0031637559381589822 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 1401 5183 AEEEPNRIP True H1975_Epitope_Rep2 1053.50908787189 1053.50798993586 25.009 2 0.1480359214184345 0.0007045974986788797 0.0031638612742545522 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1', 'MDC1|p.D1867N|1|0.05|ENSG00000137337|chr6:30703501-30703501|C/T|missense_variant'] 75001 7356 NHQKDIQVL True PC9_epitope_Rep5 1093.58800689893 1093.5869099358601 33.253 2 0.14803308998561276 0.0007045974986788797 0.0031640676930959153 ['ENSG00000153561|ENST00000283632|RMND5A'] 59583 8958 LFVGGIKEDTE True NCI_RA007_Epitope_Rep4 1206.61321858726 1206.6121299358601 41.293 2 0.14802090982983493 0.0007045974986788797 0.003164955811035359 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 43935 20247 IIDGKIFCV True PC9_epitope_Rep1 1006.5521389841799 1006.55104993586 82.708 2 0.14801262267701484 0.0007045974986788797 0.0031655602118324045 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 28407 12994 FRYTAGTPY True PC9_epitope_Rep3 1074.5134449763398 1074.5123499358601 55.009 2 0.14799913862473515 0.0007045974986788797 0.003166543879691189 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 71264 21078 LYPQFM[Oxidation]FHL True PC9_epitope_Rep2 1210.5845021220598 1210.5834099358601 86.534 2 0.1479978950171337 0.0007045974986788797 0.0031666346167567275 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 105846 10659 SSLPTQLFK True NCI_RA007_Epitope_Rep3 1019.5651461960299 1019.56404993586 48.974 2 0.14799762102383474 0.0007045974986788797 0.0031666546084167507 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 30317 7306 GAAKDLPGV True PC9_epitope_Rep4 826.4548674710599 826.45376993586 35.432 2 0.14798829448718528 0.0007045974986788797 0.003167335185163919 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 142493 20217 YYIEGIENSVF True PC9_epitope_Rep6 1332.62378327096 1332.62268993586 90.443 2 0.14798585411743506 0.0007045974986788797 0.0031675132880306556 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 75618 7768 NLDSQRLQY True H1975_Epitope_Rep2 1135.56218607391 1135.56108993586 34.827 2 0.14798410720720165 0.0007045974986788797 0.003167640787010168 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-7|UEVLD'] 2640 8084 AESIDNPLHEA True H1975_Epitope_Rep1 1194.55168095986 1194.5505899358602 36.038 2 0.1479799807468704 0.0007045974986788797 0.003167941978731243 ['ENSG00000134996|ENST00000346234|OSTF1'] 22363 10677 ETEDVNLAY True H1975_Epitope_Rep1 1052.4662200004 1052.46567496793 46.028 1 0.14796665801521716 0.0007045974986788797 0.0031689146038777513 ['ENSG00000153767|ENST00000283875|GTF2E1'] 97804 5165 SELEMAKA True NCI_RA007_Epitope_Rep4 877.4215187374499 877.4204299358599 26.391 2 0.1479578589600882 0.0007045974986788797 0.003169557141209256 ['ENSG00000267796|ENST00000301159|LIN37'] 60841 19831 LHVGDAILAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 81.326 2 0.1479576796398543 0.0007045974986788797 0.003169570237138305 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC'] 54640 15289 KYLGQLHYL True PC9_epitope_Rep5 1133.62332977849 1133.62168490379 63.818 3 0.14795754296602798 0.0007045974986788797 0.0031695802185953644 ['ENSG00000076201|ENST00000265562|PTPN23'] 76971 12585 NRESYEVSL True PC9_epitope_Rep5 1095.51965255559 1095.5185499358602 53.408 2 0.14795383952372385 0.0007045974986788797 0.0031698506974306086 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000502972.1_1_4:48859213-48862776:+|nuORF'] 14457 17076 DTEPPPLLVY True H1975_Epitope_Rep1 1142.5859412102598 1142.5848499358601 71.108 2 0.14794908089198858 0.0007045974986788797 0.003170198275144055 ['ENSG00000174231|ENST00000304992|PRPF8'] 115207 14399 TRDSLPVSL True PC9_epitope_Rep4 986.53965972418 986.53856993586 63.296 2 0.14794788867956812 0.0007045974986788797 0.0031702853620955034 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 36630 16098 GVIDLIFEK True NCI_RA007_Epitope_Rep4 1032.58554728744 1032.5844499358602 69.816 2 0.14794290489934753 0.0007045974986788797 0.00317064943559631 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 40854 9756 HSEAFSINFR True NCI_RA007_Epitope_Rep2 1206.57817049122 1206.5770699358602 42.57 2 0.14794114758729213 0.0007045974986788797 0.0031707778201069754 ['CON__P34955'] 60877 20052 LHYGLPVVV True PC9_epitope_Rep3 995.5804023373499 995.57930993586 82.379 2 0.14793814217271503 0.0007045974986788797 0.0031709973996298913 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 29882 20751 FVVDEVHLI True PC9_epitope_Rep1 1069.5807962601698 1069.5796899358602 84.646 2 0.14793669893568226 0.0007045974986788797 0.0031711028497930704 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 99491 6707 SIDDLEEK True PC9_epitope_Rep4 947.44475627983 947.44364993586 32.983 2 0.14793642759882433 0.0007045974986788797 0.00317112267541947 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 78248 19570 NYGRVFSEW True PC9_epitope_Rep3 1156.53015766964 1156.5290699358602 80.511 2 0.14793361685504267 0.0007045974986788797 0.0031713280538005623 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 28964 9830 FTDVIGHY True H1975_Epitope_Rep3 950.4497820906199 950.44868993586 42.839 2 0.14793124520238338 0.0007045974986788797 0.003171501358503385 ['ENSG00000090432|ENST00000264198|MUL1'] 8854 19725 AVFDKTLAEL True PC9_epitope_Rep2 1105.60192562757 1105.60082993586 81.262 2 0.1479281659045459 0.0007045974986788797 0.0031717263872973614 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 11736 12050 DHASIQMNV True PC9_epitope_Rep1 1013.46002950449 1013.4589299358599 51.209 2 0.1479164807805312 0.0007045974986788797 0.003172580456797747 ['ENSG00000171858|ENST00000343986|RPS21'] 100847 9967 SLEPVAVELK True H1975_Epitope_Rep1 1083.6175756917098 1083.61646993586 43.274 2 0.1478932932073299 0.0007045974986788797 0.003174275921558326 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 104735 12480 SQVEILQRV True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 59.426 2 0.14788835261586158 0.0007045974986788797 0.0031746372918245165 ['ENSG00000117318|ENST00000374561|ID3'] 27010 11783 FLEQVHQLY True H1975_Epitope_Rep3 1175.59750895347 1175.59640993586 50.468 2 0.14788727858464157 0.0007045974986788797 0.0031747158552325053 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 37595 12722 GVVPTIQKV True PC9_epitope_Rep5 939.5753169569098 939.57420993586 53.943 2 0.14788458768054796 0.0007045974986788797 0.0031749126984104226 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 97690 5255 SEIDM[Oxidation]NDIK True NCI_RA007_Epitope_Rep2 1079.48049054599 1079.4793899358601 25.061 2 0.14788053620372607 0.0007045974986788797 0.0031752090921777663 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 41565 19470 HYTYILEVF True PC9_epitope_Rep6 1183.5913609438696 1183.59026993586 87.555 2 0.1478771666791283 0.0007045974986788797 0.003175455617353278 ['ENSG00000151012|ENST00000280612|SLC7A11'] 76829 11321 NRAQIQTVI True PC9_epitope_Rep1 1041.59309227937 1041.59198993586 48.425 2 0.147873972769609 0.0007045974986788797 0.0031756893115475362 ['ENSG00000114030|ENST00000344337|KPNA1'] 76892 9179 NRDLSTPGL True PC9_epitope_Rep4 971.5036085686299 971.50250993586 42.901 2 0.14787140654607916 0.0007045974986788797 0.0031758770911726004 ['ENSG00000131711|ENST00000296755|MAP1B'] 128076 10170 VPLAIVNKA True PC9_epitope_Rep6 923.58040233735 923.57930993586 49.749 2 0.14787120302991347 0.0007045974986788797 0.0031758919836408417 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 9109 20044 AVIPRLVQL True PC9_epitope_Rep3 1007.64915060351 1007.64804993586 82.349 2 0.1478663630773828 0.0007045974986788797 0.003176246171749694 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 96309 14253 RYSEYAEEF True PC9_epitope_Rep3 1192.5036681382796 1192.50256993586 59.91 2 0.14786310235378003 0.0007045974986788797 0.0031764848139153147 ['ENSG00000139505|ENST00000381801|MTMR6'] 116224 17281 TTDCLQLLAY True H1975_Epitope_Rep2 1139.55326118299 1139.55216993586 71.762 2 0.14786264688536563 0.0007045974986788797 0.0031765181496442594 ['ENSG00000173801|ENST00000393931|JUP'] 9610 19600 AYALLLQHL True PC9_epitope_Rep4 1040.60186605792 1040.6007699358602 83.516 2 0.1478591847325413 0.0007045974986788797 0.0031767715559542944 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF'] 32087 5334 GESPVPHTV True H1975_Epitope_Rep2 921.45559574705 921.45448993586 25.571 2 0.1478524306145794 0.0007045974986788797 0.0031772659698660367 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN'] 26674 20089 FISPFGHGL True PC9_epitope_Rep5 973.5021520166499 973.50104993586 82.323 2 0.14785206466463208 0.0007045974986788797 0.003177292760264219 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5', 'ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF'] 141936 19742 YVFPGVTRL True PC9_epitope_Rep5 1050.58621599378 1050.5851099358601 80.982 2 0.1478517571616015 0.0007045974986788797 0.0031773152720647453 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 104652 10136 SQTFVNPHV True PC9_epitope_Rep2 1027.5086939490698 1027.50758993586 44.327 2 0.1478444533331124 0.0007045974986788797 0.0031778500202046815 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 9734 21600 AYGSLFNTI True PC9_epitope_Rep1 984.4916469026 984.49109496793 87.908 1 0.14784180142653844 0.0007045974986788797 0.0031780442010952647 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 46448 10951 ISTEVNPKL True PC9_epitope_Rep3 999.56006081559 999.55896993586 47.104 2 0.1478241583477569 0.0007045974986788797 0.0031793363830122556 ['ENSG00000007545|ENST00000397412|CRAMP1'] 105168 18067 SRFPYYNSL True PC9_epitope_Rep1 1145.55055876105 1145.54946993586 74.287 2 0.14782263332976292 0.0007045974986788797 0.003179448100112848 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 77378 9306 NSEPETLEY True H1975_Epitope_Rep1 1080.46113461996 1080.46057496793 40.704 1 0.14781697473366295 0.0007045974986788797 0.0031798626617767444 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 75895 8286 NLQTVNVDEN True NCI_RA007_Epitope_Rep1 1144.53603089572 1144.5349299358602 36.231 2 0.14781545051595277 0.0007045974986788797 0.0031799743386373186 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 42934 8388 IESDPVTPP True H1975_Epitope_Rep1 953.47057710485 953.47002496793 37.192 1 0.14781370054984908 0.0007045974986788797 0.003180102560513186 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant'] 26796 21668 FLADPSAFVAA True PC9_epitope_Rep1 1107.5600608155898 1107.5589699358602 88.175 2 0.14781220532269443 0.0007045974986788797 0.0031802121214702505 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 34927 7506 GQNPTEAEL True NCI_RA007_Epitope_Rep5 957.44033960573 957.4397949679301 35.553 1 0.1478114251143456 0.0007045974986788797 0.0031802692917819934 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 108315 8759 SYISRTNQL True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 39.047 2 0.14781031365857275 0.0007045974986788797 0.003180350736245764 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 54729 14517 KYMDVQFDF True NCI_RA007_Epitope_Rep5 1191.52704643515 1191.5259499358601 62.516 2 0.14781007643085703 0.0007045974986788797 0.003180368119917887 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 27781 21337 FQAEIAQLM True PC9_epitope_Rep3 1049.52156713189 1049.52046993586 87.368 2 0.1478091200215972 0.0007045974986788797 0.003180438205035798 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 115587 6545 TRSTFSTNY True PC9_epitope_Rep6 1075.49343780775 1075.4923499358601 33.855 2 0.1478088545521902 0.0007045974986788797 0.0031804576587529587 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 92825 12059 RPAQPTLWTA True PC9_epitope_Rep6 1139.60874234351 1139.60764993586 57.697 2 0.14780545995106467 0.0007045974986788797 0.003180706427080036 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 10047 8742 AYSRVQYQF True NCI_RA007_Epitope_Rep3 1160.5614577979202 1160.56036993586 41.476 2 0.1478007686261507 0.0007045974986788797 0.003181050255754393 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 46622 8531 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 37.8 2 0.1477997523530403 0.0007045974986788797 0.003181124743601582 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 111663 11376 TIEIITDR True PC9_epitope_Rep2 959.52876068731 959.52766993586 49.078 2 0.1477987944426712 0.0007045974986788797 0.0031811949553338784 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 6175 9673 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 42.156 2 0.14779854979024037 0.0007045974986788797 0.0031812128878130276 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 70105 15708 LVPEFVHNV True PC9_epitope_Rep4 1052.5654805492 1052.5643899358602 68.347 2 0.14779825593131274 0.0007045974986788797 0.003181234427151898 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant'] 89398 22422 QYAPLLAVF True PC9_epitope_Rep4 1020.5644179200399 1020.56387496793 94.478 1 0.14779445731668786 0.0007045974986788797 0.003181512871934533 ['ENSG00000136261|ENST00000258761|BZW2'] 87533 12906 QQITENPQL True PC9_epitope_Rep5 1069.54038800017 1069.53928993586 54.655 2 0.1477880546464011 0.0007045974986788797 0.003181982253209811 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENST00000533705.5_1_9:86284090-86294929:-|nuORF'] 105003 15852 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.60010993586 65.966 2 0.1477835346118875 0.0007045974986788797 0.003182313659492741 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 111317 14665 THMTAIVGM True PC9_epitope_Rep5 959.4568587003499 959.45576993586 61.412 2 0.14777918287870545 0.0007045974986788797 0.0031826327584628658 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 89267 20213 QVVPVLVHL True PC9_epitope_Rep1 1002.6226015025 1002.62150993586 82.578 2 0.1477731345278488 0.0007045974986788797 0.0031830763179594873 ['ENSG00000039123|ENST00000230640|MTREX'] 24622 23066 FAISILQQL True PC9_epitope_Rep1 1031.60153170475 1031.6004299358601 93.523 2 0.14776742417542635 0.0007045974986788797 0.0031834951465715936 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 45552 6364 IQRTPKIQVYS True H1975_Epitope_Rep1 1331.75613485319 1331.7544949037901 29.54 3 0.14775965811648226 0.0007045974986788797 0.003184064839970101 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 71843 12790 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 54.303 2 0.14775859917217382 0.0007045974986788797 0.0031841425286152007 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 73438 16760 MVADKFTEL True PC9_epitope_Rep1 1052.52123277872 1052.5206749679298 69.292 1 0.14775199703567593 0.0007045974986788797 0.003184626931874077 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 65296 9147 LQYYDISAK True NCI_RA007_Epitope_Rep2 1099.5549754351498 1099.5538699358601 40.187 2 0.14775060024045497 0.0007045974986788797 0.003184729425087272 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 133857 20572 VYGPLPQSF True PC9_epitope_Rep1 1006.5123823471798 1006.51128993586 83.944 2 0.14775058387847453 0.0007045974986788797 0.0031847306257064348 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 96501 7720 SADETWDSA True NCI_RA007_Epitope_Rep4 980.37231961556 980.37177496793 36.368 1 0.14774710674103866 0.0007045974986788797 0.0031849857833870974 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 89495 17698 QYILFPLRF True NCI_RA007_Epitope_Rep3 1195.67536535135 1195.6742699358601 77.6 2 0.14774381549506385 0.0007045974986788797 0.0031852273188014255 ['ENSG00000101407|ENST00000373447|TTI1'] 117693 20274 TVTTVILEV True PC9_epitope_Rep4 973.5695628701299 973.56901496793 86.126 1 0.14773518448208403 0.0007045974986788797 0.003185860811456427 ['ENSG00000119203|ENST00000238112|CPSF3'] 106909 2612 SVDPKNYPK True NCI_RA007_Epitope_Rep3 1046.53965972418 1046.53856993586 14.739 2 0.14773326346004417 0.0007045974986788797 0.003186001826250949 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 92893 9905 RPFQSLIHA True PC9_epitope_Rep6 1067.58761297611 1067.58650993586 48.609 2 0.14773275019150833 0.0007045974986788797 0.003186039504359162 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 90559 8692 REMEENFAV True H1975_Epitope_Rep2 1123.49680893603 1123.49570993586 38.395 2 0.14773131177411217 0.0007045974986788797 0.0031861450983216195 ['ENSG00000026025|ENST00000544301|VIM'] 31384 13897 GDSVIVVLR True PC9_epitope_Rep4 956.5654805492 956.56438993586 61.355 2 0.14772745677485805 0.0007045974986788797 0.0031864281102916485 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 45632 19284 IRDNFVIVY True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 79.55 2 0.14772190292447057 0.0007045974986788797 0.003186835886150008 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 106724 8207 STVNVILGK True NCI_RA007_Epitope_Rep5 929.5545815123298 929.55348993586 38.248 2 0.1477215128125795 0.0007045974986788797 0.0031868645309705247 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 25718 9083 FESIIKEAA True H1975_Epitope_Rep3 1006.5335117145798 1006.53240993586 39.925 2 0.1477214074564326 0.0007045974986788797 0.003186872267020423 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5'] 9320 3865 AVQRTLLEK True NCI_RA007_Epitope_Rep3 1056.6291434349198 1056.6280499358602 21.454 2 0.14770301768392635 0.0007045974986788797 0.0031882228702784653 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 112103 19173 TIVNELVRV True PC9_epitope_Rep5 1041.61824439805 1041.6171499358602 78.786 2 0.1476921266354979 0.0007045974986788797 0.0031890230118832032 ['ENSG00000171298|ENST00000302262|GAA'] 34990 19756 GQTEVFQAL True PC9_epitope_Rep3 991.4974605590297 991.49636993586 81.219 2 0.14769153214738137 0.0007045974986788797 0.0031890666933791488 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'THOC6|p.L11V|1|0.09|ENSG00000131652|chr16:3024357-3024357|C/G|missense_variant', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 105043 14210 SRDPIVMGV True PC9_epitope_Rep1 972.50625142092 972.50514993586 59.481 2 0.1476860482504498 0.0007045974986788797 0.0031894696644421995 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.T1113M|1|0.07|ENSG00000158417|chr2:99396843-99396843|C/T|missense_variant'] 98223 4180 SETSGIARP True NCI_RA007_Epitope_Rep4 916.4614094034799 916.46030993586 22.38 2 0.14768592602453454 0.0007045974986788797 0.003189478646498568 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 1939 6980 AEINATM[Oxidation]SV True H1975_Epitope_Rep2 950.4378974580201 950.43734496793 31.771 1 0.14768329518461207 0.0007045974986788797 0.0031896719860041115 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 63019 17562 LLPSRQFGF True PC9_epitope_Rep4 1063.5814649665099 1063.58036993586 75.57 2 0.14768133452942764 0.0007045974986788797 0.003189816081449421 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 87989 13842 QRNEVVVEL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 58.263 2 0.14768032710357043 0.0007045974986788797 0.003189890123237247 ['ENSG00000186432|ENST00000334256|KPNA4'] 65588 9887 LRVDPVNFK True PC9_epitope_Rep6 1086.61857875122 1086.61748993586 48.531 2 0.14767759304552525 0.0007045974986788797 0.003190091074229431 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'ENSG00000130656|ENST00000252951|HBZ', 'CON__P01966'] 142562 21440 YYLNEIQSF True PC9_epitope_Rep1 1175.5498900547097 1175.5487899358602 87.307 2 0.14767605352617794 0.0007045974986788797 0.0031902042331626037 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 4377 12445 AIMDPLPLR True NCI_RA007_Epitope_Rep4 1024.57393705792 1024.57282993586 54.878 2 0.1476744451182228 0.0007045974986788797 0.003190322459864002 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 12090 6309 DHVTATQL True PC9_epitope_Rep4 883.4399456829101 883.43884993586 31.328 2 0.14767437925516294 0.0007045974986788797 0.0031903273012487314 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 138499 13226 YHSEVPVSL True PC9_epitope_Rep4 1029.51311062317 1029.51257496793 58.769 1 0.14766616602127705 0.0007045974986788797 0.003190931087316809 ['ENSG00000115306|ENST00000356805|SPTBN1'] 13284 17982 DLTEYLSR True PC9_epitope_Rep5 995.49237517859 995.49126993586 74.186 2 0.14766336569419242 0.0007045974986788797 0.003191136975997546 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 142840 13295 YYTDIMHTL True NCI_RA007_Epitope_Rep4 1155.5270464351497 1155.5259499358601 58.28 2 0.14766335268026046 0.0007045974986788797 0.003191137932852799 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 110335 5480 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.43850993586 26.094 2 0.1476605855854097 0.0007045974986788797 0.0031913413912382726 ['ENSG00000167470|ENST00000682408|MIDN'] 49316 5005 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 24.378 2 0.14765882383151235 0.0007045974986788797 0.0031914709358423303 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 77672 7326 NTIDPSHPM True PC9_epitope_Rep6 1010.4491304676201 1010.44802993586 37.352 2 0.14765871333346428 0.0007045974986788797 0.003191479061116258 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 111529 20027 TIAEGLTLAQV True PC9_epitope_Rep4 1114.62338934814 1114.6228749679299 85.17 1 0.14765857769809904 0.0007045974986788797 0.0031914890348454274 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 90285 9330 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 40.848 2 0.14764764018536572 0.0007045974986788797 0.003192293409377908 ['ENSG00000130255|ENST00000347512|RPL36'] 106362 20592 STIAILNSV True PC9_epitope_Rep2 916.5229470308801 916.52239496793 84.638 1 0.1476434512175025 0.0007045974986788797 0.0031926015309106113 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 2501 5636 AEQMASVQNA True H1975_Epitope_Rep2 1047.46550880775 1047.4644099358602 26.678 2 0.14764204640729728 0.0007045974986788797 0.003192704869020418 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 18437 20529 EIYKEFFEV True PC9_epitope_Rep2 1202.58594121026 1202.5848499358601 84.397 2 0.14762842747044688 0.0007045974986788797 0.0031937068531384294 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 45582 18854 IQTAVRLLL True PC9_epitope_Rep4 1025.6597152872098 1025.65860993586 80.608 2 0.14762709137314314 0.0007045974986788797 0.003193805170484141 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 2207 6051 AEMGTHTVSV True H1975_Epitope_Rep3 1030.4753452154598 1030.4742499358601 28.288 2 0.1476252559524813 0.0007045974986788797 0.0031939402356816493 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF'] 26216 14259 FHDMGGVQL True PC9_epitope_Rep4 1002.4593012284997 1002.4582099358599 62.751 2 0.14762456267898763 0.0007045974986788797 0.0031939912538687526 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 35382 6634 GSDCTTIHY True H1975_Epitope_Rep3 995.4018459220301 995.40074993586 30.472 2 0.14761945292135656 0.0007045974986788797 0.003194367307345024 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.Y236C|2|0.45|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 105597 11331 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45877496793 48.563 1 0.1476193591229378 0.0007045974986788797 0.003194374210867134 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 26399 16503 FHYEADGANVL True PC9_epitope_Rep3 1234.5618517207397 1234.56074993586 68.615 2 0.14761047220102397 0.0007045974986788797 0.003195028351704962 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 69906 11246 LVIPFTIKK True NCI_RA007_Epitope_Rep4 1057.68995278633 1057.6888499358602 50.15 2 0.14760240931360336 0.0007045974986788797 0.0031956219530124438 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 129377 9585 VRDQTELRL True PC9_epitope_Rep3 1128.62512068364 1128.6234749037899 41.82 3 0.1475973088543933 0.0007045974986788797 0.003195997512762435 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1'] 21878 13179 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45507496793 55.818 1 0.14759020098322803 0.0007045974986788797 0.003196520956570829 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 92522 19903 RLYPWGVVEV True PC9_epitope_Rep4 1216.6604435631998 1216.65934993586 84.691 2 0.14758892354025846 0.0007045974986788797 0.0031966150401370095 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 21180 5929 ERDM[Oxidation]SNVSL True PC9_epitope_Rep2 1065.47607387189 1065.4749699358601 28.196 2 0.14758646739537196 0.0007045974986788797 0.0031967959427387947 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 108219 18556 SYIALPLTL True NCI_RA007_Epitope_Rep3 989.57973363101 989.57862993586 81.19 2 0.1475829649572436 0.0007045974986788797 0.0031970539256605396 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 99027 20376 SHEEALSFVSL True PC9_epitope_Rep3 1217.5928174958499 1217.59172993586 83.627 2 0.14757802829526917 0.0007045974986788797 0.0031974175859452573 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 72294 11291 MIDPSGVSY True H1975_Epitope_Rep2 967.4320834211501 967.43153496793 48.478 1 0.1475774207588153 0.0007045974986788797 0.003197462343094471 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 103024 20990 SPFQFTVGP True PC9_epitope_Rep2 978.4810822188999 978.48053496793 86.189 1 0.14757085862113575 0.0007045974986788797 0.0031979458148346665 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 49984 9105 KITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep2 1246.62273800457 1246.6216499358602 40.022 2 0.14757040536024815 0.0007045974986788797 0.0031979792119466886 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 73694 21911 MYPYIFHVL True PC9_epitope_Rep5 1181.59433814933 1181.59324993586 89.32 2 0.14756777750100544 0.0007045974986788797 0.003198172844379126 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 68329 16130 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.52277496793 67.256 1 0.14756333001330216 0.0007045974986788797 0.0031985005817528928 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 101333 18691 SLIRNLEQL True PC9_epitope_Rep4 1084.62405805448 1084.62296993586 79.975 2 0.1475618463909953 0.0007045974986788797 0.003198609917980217 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 52526 12306 KLEATINELV True NCI_RA007_Epitope_Rep1 1128.63903941228 1128.6379499358602 51.838 2 0.14755925898596428 0.0007045974986788797 0.003198800606877806 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 6678 21546 APYPGFLSV True PC9_epitope_Rep3 949.49091862661 949.48982993586 88.172 2 0.14755439273693238 0.0007045974986788797 0.0031991592746984823 ['ENSG00000160447|ENST00000291906|PKN3'] 37498 22328 GVVDIFQTV True PC9_epitope_Rep1 976.52294703088 976.52184993586 90.699 2 0.14755356467974903 0.0007045974986788797 0.0031992203107949245 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 120916 8910 VENSPSPLP True H1975_Epitope_Rep2 938.4709114580199 938.4703649679301 39.24 1 0.1475388521093372 0.0007045974986788797 0.003200304967528539 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'ENST00000399098.5_2_21:38444584-38445304:-|nuORF', 'ENST00000329667.7_1_21:38439639-38444836:-|nuORF', 'ENST00000430792.1_1_21:38444584-38444998:-|nuORF', 'ENST00000479152.1_1_21:38441850-38444998:-|nuORF'] 6371 5524 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 28.013 2 0.14753074224690355 0.0007045974986788797 0.0032009030083440713 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 140901 13853 YSEEIVEMY True H1975_Epitope_Rep1 1161.4899922200898 1161.48888993586 58.434 2 0.1475184997928538 0.0007045974986788797 0.0032018060070012904 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 54695 18615 KYLVIGDLLF True NCI_RA007_Epitope_Rep4 1179.69034670915 1179.68924993586 80.517 2 0.14751793393277984 0.0007045974986788797 0.003201847750746685 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 74958 13210 NHMPSSINL True PC9_epitope_Rep1 1011.48076494907 1011.47966993586 55.676 2 0.14749904081797077 0.0007045974986788797 0.0032032418149153937 ['ENSG00000177485|ENST00000557385|ZBTB33'] 63686 12614 LMVDHVTEV True PC9_epitope_Rep4 1041.51648175145 1041.5153899358602 56.358 2 0.14749485995588976 0.0007045974986788797 0.0032035503892955943 ['ENST00000602875.5_1_5:139930287-139937028:-|nuORF', 'ENSG00000213523|ENST00000336283|SRA1'] 21555 14386 ERNPTQFQL True PC9_epitope_Rep5 1131.5672714543498 1131.5661699358602 60.336 2 0.14749409609567507 0.0007045974986788797 0.003203606770262768 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12', 'PHF12|p.Q258Lfs*5|1|0.0|ENSG00000109118|chr17:28921751-28921752|-/TA|frameshift_variant', 'PHF12|p.Q258Kfs*12|1|0.0|ENSG00000109118|chr17:28921752-28921753|-/GCCATGACACATGCTTAAGATCTGTTTT|frameshift_variant'] 31448 9256 GEALPHVVP True H1975_Epitope_Rep2 917.49706663621 917.49596993586 40.559 2 0.14748223208029343 0.0007045974986788797 0.0032044825868675873 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 38486 7098 HEQLRAVIV True H1975_Epitope_Rep2 1063.61382772395 1063.6127299358602 32.232 2 0.14748098155325393 0.0007045974986788797 0.003204574916226967 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 140306 15464 YRDENLVTI True PC9_epitope_Rep1 1121.57168812845 1121.5705899358602 64.303 2 0.14748059353215057 0.0007045974986788797 0.003204603565277654 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5', 'ENST00000502747.1_1_5:79454657-79462329:-|nuORF'] 121956 22616 VFTEVANLF True PC9_epitope_Rep1 1038.53859709502 1038.53750993586 91.802 2 0.1474790324004307 0.0007045974986788797 0.003204718832051322 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 38485 7085 HEQLRAVIV True H1975_Epitope_Rep1 1063.61382772395 1063.6127299358602 32.279 2 0.14747789388907862 0.0007045974986788797 0.003204802897084565 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 14165 13348 DSDMQTLVY True H1975_Epitope_Rep3 1070.45902644498 1070.4579299358602 56.605 2 0.14747760072553445 0.0007045974986788797 0.0032048245439547014 ['ENSG00000149823|ENST00000279281|VPS51'] 65330 8554 LRDENVNVV True PC9_epitope_Rep2 1056.5563724174801 1056.55526993586 38.264 2 0.1474668947187129 0.0007045974986788797 0.0032056151632350476 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 106286 8837 STFNQVVLK True NCI_RA007_Epitope_Rep1 1034.5760452328998 1034.57494993586 38.373 2 0.14746160541359582 0.0007045974986788797 0.0032060058404679123 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 41210 21233 HVLDTLIQL True PC9_epitope_Rep1 1050.60734536118 1050.6062499358602 86.497 2 0.14745822363284272 0.0007045974986788797 0.003206255649467872 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 107402 13434 SVLNLVIVK True NCI_RA007_Epitope_Rep1 983.6379172134699 983.63682993586 56.261 2 0.14745416353765442 0.0007045974986788797 0.003206555590500009 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 54887 14379 KYPLLLQSI True NCI_RA007_Epitope_Rep4 1073.6484818971699 1073.64738993586 62.617 2 0.14745278725948266 0.0007045974986788797 0.003206657269892037 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1', 'nc|ENSG00000076928|Q92888-4|ARHGEF1', 'ENST00000595897.5_1_19:42402462-42407822:+|nuORF'] 9890 18847 AYLKGTVLF True PC9_epitope_Rep2 1010.5800679841799 1010.57896993586 77.863 2 0.1474438530689019 0.0007045974986788797 0.0032073174056226517 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 96575 10217 SAFGVIIEK True NCI_RA007_Epitope_Rep5 962.54368247546 962.54258993586 45.931 2 0.147431628734128 0.0007045974986788797 0.0032082208648420113 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 2431 10976 AEQIARWIA True H1975_Epitope_Rep2 1056.5716285587998 1056.5705299358601 47.246 2 0.14742421229876296 0.0007045974986788797 0.0032087691118520786 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 118512 16222 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 67.535 2 0.14742234888992015 0.0007045974986788797 0.003208906875738499 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 71845 12629 M[Oxidation]ELITPISA True H1975_Epitope_Rep3 989.5103341222899 989.50978496793 53.783 1 0.14739799502878345 0.0007045974986788797 0.0032107079247344853 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 5126 21118 ALLNILSEV True PC9_epitope_Rep6 970.5698972233 970.56880993586 94.069 2 0.14739785808969944 0.0007045974986788797 0.0032107180546771196 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-2|UBA6'] 114752 8655 TQKSLSLSLG True NCI_RA007_Epitope_Rep3 1032.5815245361598 1032.5804299358601 41.125 2 0.1473920921949986 0.0007045974986788797 0.003211144610277158 ['nc|ENSG00000211892|P01861-1|IGHG4'] 49298 3091 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 16.291 2 0.14739092458490013 0.0007045974986788797 0.003211230995863522 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 76897 14574 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.54978993586 60.883 2 0.1473875153923084 0.0007045974986788797 0.0032114832380683946 ['ENSG00000013523|ENST00000251089|ANGEL1'] 45597 9553 IQVTKVTQV True PC9_epitope_Rep2 1014.6073453611799 1014.60624993586 42.091 2 0.14738616763883486 0.0007045974986788797 0.003211582962219681 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 114568 20032 TQDAVPLTL True PC9_epitope_Rep5 956.51786165044 956.51676993586 82.105 2 0.14738422760483774 0.0007045974986788797 0.003211726516316171 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 142670 14932 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.62334993586 62.259 2 0.14738059682046004 0.0007045974986788797 0.003211995195752734 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 26308 12633 FHLSSQSSL True PC9_epitope_Rep5 1004.49270953176 1004.49160993586 53.595 2 0.14738030157069754 0.0007045974986788797 0.003212017045331269 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 76375 15529 NQAKYIPEL True PC9_epitope_Rep1 1074.57095985246 1074.5698699358602 64.556 2 0.14737916965956052 0.0007045974986788797 0.0032121008123273645 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 77323 13452 NSDVSLLNY True H1975_Epitope_Rep1 1023.48728979815 1023.48677496793 56.859 1 0.14737904105280544 0.0007045974986788797 0.003212110329997782 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 133691 17320 VYAQVARLF True PC9_epitope_Rep6 1065.5971150306498 1065.5960099358601 79.235 2 0.14737801651380272 0.0007045974986788797 0.0032121861530242904 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 32189 8425 GEVTQGFAA True H1975_Epitope_Rep2 878.4133965818997 878.41284496793 37.358 1 0.1473692981873609 0.0007045974986788797 0.0032128314419740244 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF', 'ENST00000518740.5_2_3:126326756-126328052:-|nuORF', 'ENSG00000197763|ENST00000524230|TXNRD3', 'ENST00000524230.6_3_3:126326756-126373974:-|nuORF'] 64808 4268 LQDAEIAR True NCI_RA007_Epitope_Rep3 914.4821448480599 914.48104993586 23.486 2 0.1473651062248478 0.0007045974986788797 0.003213141756949217 ['ENSG00000197956|ENST00000368719|S100A6'] 32449 14813 GFVTFDDHD True PC9_epitope_Rep2 1051.42468954159 1051.42358993586 62.242 2 0.1473635681065711 0.0007045974986788797 0.0032132556254466584 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105726 3819 SSFEHEFKK True NCI_RA007_Epitope_Rep4 1137.5454733806098 1137.54382490379 20.878 3 0.14736121030242316 0.0007045974986788797 0.0032134301839344902 ['nc|ENSG00000170653|P17544-2|ATF7', 'nc|ENSG00000170653|P17544-3|ATF7', 'ENSG00000170653|ENST00000420353|ATF7', 'nc|ENSG00000170653|P17544-1|ATF7', 'ENST00000550373.2_1_12:53937026-53937696:-|nuORF', 'nc|ENSG00000170653|P17544-5|ATF7', 'nc|ENSG00000170653|P17544-4|ATF7'] 105592 10450 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 45.211 2 0.1473561103088241 0.0007045974986788797 0.0032138077908899893 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 14903 23012 DYATIFNNL True PC9_epitope_Rep5 1069.5080252427301 1069.5069299358602 93.506 2 0.14735523688615143 0.0007045974986788797 0.0032138724641181888 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 49112 13511 KEINISFIP True H1975_Epitope_Rep3 1059.59644632431 1059.5953499358602 57.248 2 0.14735135995054463 0.0007045974986788797 0.0032141595503097937 ['ENSG00000116266|ENST00000370008|STXBP3', 'STXBP3|p.G375Wfs*3|1|0.32|ENSG00000116266|chr1:108796243-108796244|-/T|frameshift_variant'] 48922 13050 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69015490379 55.319 3 0.14734671865686017 0.0007045974986788797 0.0032145032705870225 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 7529 9620 ASDTNPDFY True H1975_Epitope_Rep2 1028.40870512428 1028.4081749679299 41.98 1 0.14734118175914415 0.0007045974986788797 0.0032149133644323057 ['ENSG00000197081|ENST00000356956|IGF2R'] 119236 19896 VALDKVIEI True PC9_epitope_Rep3 998.6011973515799 998.60010993586 81.771 2 0.147325226546858 0.0007045974986788797 0.003216095388405029 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 99838 18634 SILFVPTSAPR True PC9_epitope_Rep1 1186.6710082468999 1186.66990993586 76.464 2 0.14732334710847608 0.0007045974986788797 0.0032162346529396144 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 20069 12740 EMEEKYYRF True PC9_epitope_Rep1 1293.5699738762899 1293.56833490379 53.88 3 0.14732054998054298 0.0007045974986788797 0.0032164419284728693 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 110787 9947 TGISDVFAK True NCI_RA007_Epitope_Rep5 936.4916469026 936.49054993586 44.902 2 0.14731093586086685 0.0007045974986788797 0.003217154464771429 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 88924 20451 QVFPGLLERV True PC9_epitope_Rep5 1156.6604435631998 1156.65934993586 83.701 2 0.14730781073696586 0.0007045974986788797 0.0032173861125281648 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 27269 10444 FLQEKSPAV True PC9_epitope_Rep5 1017.5494961318899 1017.54838993586 45.16 2 0.14730647800724886 0.0007045974986788797 0.0032174849052889545 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 108510 17770 SYM[Oxidation]GHFDLL True PC9_epitope_Rep4 1097.48518200361 1097.48408993586 76.381 2 0.14730627593310627 0.0007045974986788797 0.0032174998849305385 ['ENSG00000169976|ENST00000367569|SF3B5'] 25690 4813 FEQPSRQV True H1975_Epitope_Rep3 989.4930438849298 989.49194993586 23.639 2 0.1472992596547378 0.0007045974986788797 0.003218020040684568 ['ENSG00000087157|ENST00000262764|PGS1'] 6786 21604 AQEDYLFSV True PC9_epitope_Rep1 1070.49204082542 1070.49094993586 87.923 2 0.147298929562069 0.0007045974986788797 0.003218044514350599 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 17607 12565 EHINEGETAML True PC9_epitope_Rep5 1242.55505208814 1242.5539499358601 53.332 2 0.14729172146526306 0.0007045974986788797 0.003218578981812576 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 95977 11443 RYLEQLHQL True PC9_epitope_Rep4 1198.64585612822 1198.64474993586 51.784 2 0.14728743836453706 0.0007045974986788797 0.003218896607872002 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 66161 10355 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.4909499358599 44.778 2 0.1472867934107352 0.0007045974986788797 0.003218944439037917 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 46632 16841 ITDIQIPLDY True H1975_Epitope_Rep2 1189.6230549949698 1189.6219499358601 70.025 2 0.1472843144748255 0.0007045974986788797 0.00321912828885531 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 132521 10908 VVDPNDPQM True PC9_epitope_Rep1 1013.44879611445 1013.44768993586 46.843 2 0.14728214680461452 0.0007045974986788797 0.0032192890622694667 ['ENSG00000151883|ENST00000281631|PARP8'] 113071 5818 TLNQIDSVK True H1975_Epitope_Rep3 1016.5502244078799 1016.54912993586 27.403 2 0.14728112573197263 0.0007045974986788797 0.003219364796729237 ['CON__P12763'] 109648 4418 TEAPLNPKA True H1975_Epitope_Rep3 939.5025459394699 939.50144993586 22.116 2 0.1472799157310213 0.0007045974986788797 0.0032194545465738 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 78421 14450 NYLSHHLTI True PC9_epitope_Rep3 1096.5665431783602 1096.5654499358602 60.687 2 0.14727638807400623 0.0007045974986788797 0.0032197162189755105 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 73903 14965 NAVYTFETL True NCI_RA007_Epitope_Rep4 1056.51277627 1056.51227496793 65.028 1 0.14727250007877984 0.0007045974986788797 0.0032200046448310695 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 81371 9457 PLDHLKPLEY True H1975_Epitope_Rep3 1223.65502382959 1223.6533649037901 41.38 3 0.14727204739252842 0.0007045974986788797 0.0032200382284404334 ['ENSG00000135763|ENST00000258243|URB2'] 108607 18154 SYPDNFLHI True PC9_epitope_Rep6 1104.52400966004 1104.52290993586 82.469 2 0.1472706585236704 0.0007045974986788797 0.003220141267163575 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 88377 20113 QSLEYLEQV True PC9_epitope_Rep1 1107.54480467427 1107.54370993586 82.194 2 0.14726958708937468 0.0007045974986788797 0.0032202207579903274 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 27548 7401 FNDPNAKEM True PC9_epitope_Rep5 1064.45969515132 1064.4585899358601 33.424 2 0.14726898681914566 0.0007045974986788797 0.0032202652935170487 ['ENSG00000056097|ENST00000265069|ZFR'] 46553 8937 ITADVNHNL True PC9_epitope_Rep1 995.50360856863 995.50250993586 39.217 2 0.14726452151904365 0.0007045974986788797 0.00322059660435742 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 93057 8610 RPNDIM[Oxidation]AEV True PC9_epitope_Rep3 1059.50189469691 1059.5007899358602 38.066 2 0.14725908923434686 0.0007045974986788797 0.003220999708039689 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 4334 6233 AIITPPPAK True NCI_RA007_Epitope_Rep4 906.5538532363399 906.55274993586 30.58 2 0.1472489123923639 0.0007045974986788797 0.003221755017532316 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 104907 17646 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.4909699358602 72.668 2 0.14723944919594015 0.0007045974986788797 0.003222457519412043 ['ENSG00000113387|ENST00000265073|SUB1'] 137577 12461 YEEPLSPISA True H1975_Epitope_Rep2 1104.5339056373998 1104.53280993586 53.021 2 0.14723510795643605 0.0007045974986788797 0.0032227798429854244 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000467894.5_1_1:33790468-33797238:-|nuORF', 'nc|ENSG00000134686|Q8IXK0-2|PHC2', 'nc|ENSG00000134686|Q8IXK0-3|PHC2', 'ENST00000485928.5_1_1:33791428-33799821:-|nuORF'] 115563 9110 TRSPVKVTL True PC9_epitope_Rep5 999.60767971435 999.60658993586 39.987 2 0.14722440316429744 0.0007045974986788797 0.003223574777635216 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 10013 20343 AYQSIQNYL True PC9_epitope_Rep5 1098.53457434374 1098.53346993586 83.284 2 0.14722209721111632 0.0007045974986788797 0.0032237460425531845 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 89732 12339 RADGNFLLY True H1975_Epitope_Rep1 1067.53999407735 1067.5388899358602 52.492 2 0.14722202774513127 0.0007045974986788797 0.003223751201985785 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 24558 17163 FAGMPITL True H1975_Epitope_Rep2 848.44661128648 848.44606496793 71.297 1 0.14721510168809465 0.0007045974986788797 0.0032242656608049863 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 8304 21307 ATIIQLFQV True PC9_epitope_Rep6 1031.6015317047497 1031.6004299358601 94.811 2 0.14721297411591883 0.0007045974986788797 0.003224423710587505 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 115312 12372 TRHPFLTAL True PC9_epitope_Rep4 1054.59236400338 1054.59126993586 55.396 2 0.14721229554049134 0.0007045974986788797 0.0032244741211672405 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 28549 13381 FSEQGINEFLR True NCI_RA007_Epitope_Rep2 1338.6568147347398 1338.6557099358602 56.689 2 0.14721146940102256 0.0007045974986788797 0.0032245354951661136 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 139354 19345 YLLPAIVHI True PC9_epitope_Rep6 1037.62735252977 1037.6262499358602 87.06 2 0.1471988499189413 0.0007045974986788797 0.003225473142414915 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 95613 10580 RYAEAVQLL True NCI_RA007_Epitope_Rep3 1061.58694426977 1061.58584993586 48.668 2 0.14719576429711967 0.0007045974986788797 0.0032257024501956685 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 60875 20094 LHYGLPVVV True PC9_epitope_Rep1 995.5804023373499 995.57930993586 82.119 2 0.1471887619928418 0.0007045974986788797 0.003226222886119611 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 95706 19236 RYFLPPYTF True PC9_epitope_Rep6 1202.6124307416196 1202.61132993586 86.642 2 0.147183085409354 0.0007045974986788797 0.0032266448510934204 ['ENSG00000023608|ENST00000216294|SNAPC1'] 127352 15291 VMSATFAKF True PC9_epitope_Rep4 1000.5051887917599 1000.50408993586 66.746 2 0.147176017424114 0.0007045974986788797 0.003227170321689541 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 35360 5755 GRYAGEESL True PC9_epitope_Rep6 980.4563240230399 980.45522993586 30.302 2 0.14717230552320698 0.0007045974986788797 0.0032274463176939464 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 31843 9094 GEIVRLTTP True NCI_RA007_Epitope_Rep4 984.56039516876 984.55928993586 41.816 2 0.14717169412122377 0.0007045974986788797 0.0032274917803468734 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000597253.5_1_19:4688763-4694742:-|nuORF'] 110207 13913 TEQLLDDVVA True H1975_Epitope_Rep2 1101.55536935797 1101.55426993586 58.663 2 0.14716638111710437 0.0007045974986788797 0.003227886871733712 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 26407 19476 FHYEDVAVL True PC9_epitope_Rep5 1091.5287606873098 1091.52766993586 79.967 2 0.14715688262942345 0.0007045974986788797 0.003228593328467368 ['ENSG00000146700|ENST00000275560|SSC4D', 'SSC4D|p.Q322Sfs*99|1|0.4|ENSG00000146700|chr7:76393887-76393887|G/-|frameshift_variant', 'nc|ENSG00000146700|Q8WTU2-2|SSC4D'] 95807 10614 RYIPTAAAF True NCI_RA007_Epitope_Rep2 1008.5392658013599 1008.53816993586 45.884 2 0.14715187024625404 0.0007045974986788797 0.003228966189988397 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 90918 11522 REYPNLVTI True NCI_RA007_Epitope_Rep5 1103.59750895347 1103.59640993586 50.97 2 0.14714859745508252 0.0007045974986788797 0.003229209669724096 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 132396 16242 VVAGRFIEV True PC9_epitope_Rep5 988.5705659296399 988.56946993586 67.464 2 0.1471465977053132 0.0007045974986788797 0.0032293584503616866 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 7249 17286 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.5233099358602 71.664 2 0.1471457366495049 0.0007045974986788797 0.0032294225146925963 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 97430 7772 SEEEFIHINNK True NCI_RA007_Epitope_Rep2 1358.64664397386 1358.6449949037901 34.859 3 0.1471394316948352 0.0007045974986788797 0.0032298916548587635 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 5063 20291 ALLDKLYAL True PC9_epitope_Rep4 1018.6062827320198 1018.60518993586 86.192 2 0.1471363656884125 0.0007045974986788797 0.003230119815292543 ['ENSG00000177971|ENST00000403490|IMP3'] 28408 11150 FRYTAGTPY True PC9_epitope_Rep4 1074.5134449763398 1074.5123499358601 50.668 2 0.14712877094262614 0.0007045974986788797 0.003230685056164693 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 47858 14491 IYHTGTFAQI True PC9_epitope_Rep2 1149.5818588893299 1149.5807699358602 61.009 2 0.14711922569006014 0.0007045974986788797 0.003231395603507885 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'LONP1|p.M552Hfs*3|1|0.14|ENSG00000196365|chr19:5699059-5699060|-/C|frameshift_variant', 'ENST00000587552.5_1_19:5708410-5719801:-|nuORF'] 97699 7401 SEIDMSVKA True H1975_Epitope_Rep2 978.46919720586 978.46808993586 33.41 2 0.14711832391140722 0.0007045974986788797 0.003231462739826559 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 137483 6679 YEEEISKVA True H1975_Epitope_Rep2 1066.51825557326 1066.51714993586 30.6 2 0.14711588864500036 0.0007045974986788797 0.0032316440493658947 ['RNF168|p.T479Hfs*9|1|0.07|ENSG00000163961|chr3:196472100-196472100|T/-|frameshift_variant', 'ENSG00000163961|ENST00000318037|RNF168'] 5068 18000 ALLDRIVSV True PC9_epitope_Rep6 984.59678067748 984.59568993586 81.865 2 0.14710844871951528 0.0007045974986788797 0.003232198026572366 ['ENSG00000155561|ENST00000285968|NUP205'] 26139 15509 FGYPDPTYL True H1975_Epitope_Rep1 1071.49131254943 1071.4907749679298 64.928 1 0.1471075334360341 0.0007045974986788797 0.003232266185147751 ['ENSG00000178498|ENST00000337737|DTX3', 'nc|ENSG00000178498|Q8N9I9-2|DTX3'] 130822 9834 VTARIALQY True H1975_Epitope_Rep2 1033.59202965021 1033.59092993586 42.812 2 0.14710524330663968 0.0007045974986788797 0.003232436730877352 ['ENSG00000126790|ENST00000247194|L3HYPDH'] 24021 18658 EYMLQNHVF True PC9_epitope_Rep1 1179.5382798251899 1179.5371899358602 76.556 2 0.14710415796958118 0.0007045974986788797 0.0032325175589558545 ['ENSG00000205339|ENST00000379719|IPO7'] 31866 11834 GELGAIAQV True NCI_RA007_Epitope_Rep5 856.4654321547599 856.46432993586 52.177 2 0.14709676657490164 0.0007045974986788797 0.0032330680701962524 ['ENSG00000113657|ENST00000343218|DPYSL3', 'nc|ENSG00000113657|Q14195|DPYSL3'] 109976 13986 TEIDSVPPLP True H1975_Epitope_Rep2 1066.55464108198 1066.55354993586 58.945 2 0.1470866544536558 0.0007045974986788797 0.0032338213722522976 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 27841 9360 FQDGTKATF True PC9_epitope_Rep1 1013.4818104948899 1013.48070993586 40.861 2 0.1470751146422999 0.0007045974986788797 0.0032346812432870317 ['ENSG00000110711|ENST00000279146|AIP'] 117737 12984 TVVERLVKV True PC9_epitope_Rep3 1041.65462990677 1041.6535299358602 54.97 2 0.1470702180746966 0.0007045974986788797 0.0032350461720880267 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 86049 10931 QHQSGIVQL True PC9_epitope_Rep5 1008.5352430500798 1008.53414993586 47.036 2 0.14706517926227897 0.0007045974986788797 0.0032354217447805563 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 108734 18203 SYRQVAFDF True PC9_epitope_Rep2 1131.5349086969097 1131.53380993586 75.325 2 0.1470651321021565 0.0007045974986788797 0.003235425260110104 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 130062 9431 VSDEAGLDY True H1975_Epitope_Rep2 967.41345615155 967.4129049679301 41.244 1 0.14706457431497685 0.0007045974986788797 0.0032354668380204506 ['nc|ENSG00000182253|O15061-2|SYNM', 'SYNM|p.A1442Efs*7|1|0.45|ENSG00000182253|chr15:99132685-99132685|C/-|frameshift_variant', 'ENSG00000182253|ENST00000336292|SYNM'] 27173 21541 FLLGPRLVLA True PC9_epitope_Rep1 1097.6961007959299 1097.69500993586 87.68 2 0.1470600345043238 0.0007045974986788797 0.0032358052589640924 ['ENSG00000170348|ENST00000303575|TMED10'] 21336 14824 ERFFSDKETF True PC9_epitope_Rep1 1304.6037165327195 1304.60206490379 61.842 3 0.14704697586905813 0.0007045974986788797 0.0032367789133904653 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 125002 19076 VIAEILRGV True PC9_epitope_Rep2 968.6018660579199 968.60076993586 78.741 2 0.14704670109092524 0.0007045974986788797 0.0032367994040319176 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 26381 13098 FHVEPGLQRL True PC9_epitope_Rep2 1194.6509415086598 1194.6493049037902 55.658 3 0.14704111086838278 0.0007045974986788797 0.003237216303809002 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 137404 5022 YEAPGVREA True H1975_Epitope_Rep2 990.4770594676198 990.47596993586 24.398 2 0.14703841350812286 0.0007045974986788797 0.003237417482858887 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 106687 16174 STTPYLQSV True PC9_epitope_Rep1 994.4971262058599 994.49602993586 67.028 2 0.14702500088922674 0.0007045974986788797 0.003238418029952122 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2'] 54471 12560 KYGPVFSF True NCI_RA007_Epitope_Rep3 943.4803539429099 943.47924993586 56.643 2 0.14702108271669115 0.0007045974986788797 0.003238710373644552 ['ENSG00000001630|ENST00000003100|CYP51A1'] 108212 13141 SYHPALNAI True PC9_epitope_Rep5 984.5028802926399 984.50178993586 55.55 2 0.14701733512601775 0.0007045974986788797 0.0032389900143954663 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant', 'BIRC6|p.K712Sfs*9|1|0.29|ENSG00000115760|chr2:32415422-32415422|C/-|frameshift_variant'] 141033 21133 YSLEKVFGI True PC9_epitope_Rep1 1054.5698972233 1054.5688099358601 86.118 2 0.14701258219731267 0.0007045974986788797 0.0032393447068105406 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 118657 11233 TYSPALNKM[Oxidation]F True PC9_epitope_Rep6 1186.5692459807399 1186.5681499358602 54.205 2 0.14700978138976062 0.0007045974986788797 0.0032395537381728684 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 99199 16718 SHLDYDITL True PC9_epitope_Rep6 1075.5185899264302 1075.51748993586 76.781 2 0.14700774777436576 0.0007045974986788797 0.0032397055204468075 ['ENSG00000163960|ENST00000296328|UBXN7'] 8134 11097 ATEFIM[Oxidation]NEY True H1975_Epitope_Rep2 1132.47467688956 1132.47356993586 47.719 2 0.1470072524064183 0.0007045974986788797 0.0032397424941302236 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 6950 8339 AQITGTEHL True PC9_epitope_Rep1 968.49270953176 968.49160993586 36.909 2 0.14699598148686513 0.0007045974986788797 0.0032405838557667812 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 45878 9100 ISDSDYQAEY True H1975_Epitope_Rep2 1189.47751296009 1189.47697496793 39.954 1 0.14699086162343825 0.0007045974986788797 0.003240966119658187 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 73240 8091 MSDVNLKY True H1975_Epitope_Rep2 968.4637179025999 968.46262993586 36.069 2 0.1469864988745114 0.0007045974986788797 0.0032412918905653687 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 104904 10697 SRDDNM[Oxidation]FQI True PC9_epitope_Rep6 1140.48697290876 1140.4858699358601 51.958 2 0.14697343098788404 0.0007045974986788797 0.003242267877838681 ['ENSG00000113387|ENST00000265073|SUB1'] 71712 8645 MEEMHQVAIAA True H1975_Epitope_Rep3 1228.5580292936002 1228.5569299358601 38.25 2 0.14697218618383096 0.0007045974986788797 0.0032423608624317386 ['ENST00000449421.6_1_17:73205928-73222855:+|nuORF', 'ENST00000583948.5_1_17:73201841-73222120:+|nuORF', 'nc|ENSG00000125450|Q9BW27-3|NUP85', 'ENSG00000125450|ENST00000245544|NUP85', 'ENST00000583548.1_1_17:73204633-73212422:+|nuORF', 'ENST00000577208.5_1_17:73201841-73212422:+|nuORF'] 53176 7475 KQDGTIQNL True PC9_epitope_Rep3 1015.52982331647 1015.52872993586 33.756 2 0.14695741167390175 0.0007045974986788797 0.003243464693932042 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 106287 8863 STFNQVVLK True NCI_RA007_Epitope_Rep2 1034.5760452328998 1034.57494993586 39.124 2 0.14695616365365716 0.0007045974986788797 0.003243557952993252 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 101491 20562 SLLDIIEKV True PC9_epitope_Rep6 1028.61176203528 1028.6106699358602 91.82 2 0.14695457352919658 0.0007045974986788797 0.003243676779860372 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 93379 11226 RQADFVQVL True NCI_RA007_Epitope_Rep5 1074.5821932425 1074.58108993586 49.818 2 0.1469537541000591 0.0007045974986788797 0.0032437380158751067 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 77689 23069 NTIPLFVQL True PC9_epitope_Rep1 1043.60153170475 1043.6004299358601 93.535 2 0.1469512079801536 0.0007045974986788797 0.0032439282949853435 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 131681 6209 VTNDGATILK True NCI_RA007_Epitope_Rep1 1030.56587447202 1030.56476993586 28.188 2 0.14695075095610696 0.0007045974986788797 0.003243962450926097 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 114938 9352 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 46.159 2 0.1469504347938678 0.0007045974986788797 0.0032439860796923225 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 16017 8250 EDTEEYNLR True PC9_epitope_Rep5 1167.5043964142699 1167.50328993586 36.675 2 0.14694977848136043 0.0007045974986788797 0.0032440351305454665 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 34727 6632 GQEDHYNNL True PC9_epitope_Rep5 1088.45230127176 1088.45120993586 30.484 2 0.14694835053666286 0.0007045974986788797 0.0032441418534513928 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 73076 15854 MRDSLSQVL True PC9_epitope_Rep5 1047.53827982519 1047.5371899358602 65.973 2 0.1469478551715923 0.0007045974986788797 0.003244178877269389 ['nc|ENSG00000188428|Q8TDH9-2|BLOC1S5', 'nc|ENSG00000188428|Q8TDH9-3|BLOC1S5', 'ENSG00000188428|ENST00000397457|BLOC1S5'] 36898 20470 GVLPNIQAV True PC9_epitope_Rep1 909.5283667644899 909.52726993586 83.551 2 0.14694451380145254 0.0007045974986788797 0.0032444286238191167 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 2194 14034 AELYGPFTSA True H1975_Epitope_Rep2 1054.49712620586 1054.4960299358602 59.134 2 0.14692585450469944 0.0007045974986788797 0.003245823641257301 ['ENSG00000169217|ENST00000305596|CD2BP2'] 78460 20605 NYMPGQLTI True PC9_epitope_Rep1 1035.5059170677498 1035.50480993586 84.074 2 0.14692364250053475 0.0007045974986788797 0.003245989055969846 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 84205 21574 PYLDSFYEY True PC9_epitope_Rep2 1195.5073565363898 1195.50677496793 88.456 1 0.1469188939877486 0.0007045974986788797 0.0032463441803051952 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 73211 20081 MRYVASYLLA True PC9_epitope_Rep5 1185.6216155263298 1185.6205099358601 82.291 2 0.1469177864324103 0.0007045974986788797 0.003246427015975298 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 7479 9297 ASDAAPLQY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 40.719 1 0.14691709103759032 0.0007045974986788797 0.0032464790266366096 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 54989 11438 KYQEYTNEL True PC9_epitope_Rep5 1186.5506183307 1186.5495299358602 48.995 2 0.14691269743400098 0.0007045974986788797 0.0032468076565649864 ['ENSG00000183735|ENST00000331710|TBK1', 'ENST00000545392.1_1_12:64890804-64891535:+|nuORF'] 106756 6904 STYRDFQQA True PC9_epitope_Rep2 1114.50433684462 1114.5032299358602 31.957 2 0.14691087049829474 0.0007045974986788797 0.003246944316261465 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.S39G|1|0.41|ENSG00000125676|chrX:123712865-123712865|T/C|missense_variant'] 76978 19241 NRFLGDYVV True PC9_epitope_Rep5 1081.55564414149 1081.5545499358602 79.049 2 0.14688837019543566 0.0007045974986788797 0.0032486278684373854 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 142101 13544 YVPETVYRV True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 57.39 2 0.1468878809044897 0.0007045974986788797 0.003248664488557122 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 78257 11694 NYIDKVRFL True NCI_RA007_Epitope_Rep4 1166.64479349906 1166.64313490379 51.942 3 0.14688481363791214 0.0007045974986788797 0.0032488940620786096 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 28283 18606 FRPEWQSVY True PC9_epitope_Rep5 1210.57710786206 1210.5760099358602 76.592 2 0.14687703609839836 0.0007045974986788797 0.0032494762543700197 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'ENST00000512755.1_1_13:33101488-33110480:-|nuORF'] 66109 10366 LSELEAALQR True NCI_RA007_Epitope_Rep5 1128.6138872935999 1128.61278993586 46.502 2 0.14687270805059052 0.0007045974986788797 0.0032498002778603907 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 4097 13251 AHQQSIPAVL True PC9_epitope_Rep5 1062.5821932425 1062.58108993586 55.98 2 0.1468619546794339 0.0007045974986788797 0.0032506054784967554 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 87886 13237 QRIDEFESM True PC9_epitope_Rep4 1153.5073736197298 1153.50626993586 58.813 2 0.146856465498178 0.0007045974986788797 0.0032510165788467364 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 86001 10699 QHLQATGVSL True PC9_epitope_Rep2 1052.56145779792 1052.56036993586 46.467 2 0.14685129608771885 0.0007045974986788797 0.0032514037779254176 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 142357 8169 YYEHVKARF True PC9_epitope_Rep3 1211.60874234351 1211.60710490379 36.4 3 0.14685108475424533 0.0007045974986788797 0.003251419608196669 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 1596 5015 AEFAEVSK True NCI_RA007_Epitope_Rep4 879.43379767331 879.43270993586 25.774 2 0.14684988500507426 0.0007045974986788797 0.003251509478776476 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 35264 6101 GRDENSVEL True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 31.871 2 0.14684906162773623 0.0007045974986788797 0.0032515711575968487 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 118570 13205 TYQSITERI True PC9_epitope_Rep3 1109.57168812845 1109.5705899358602 55.829 2 0.14684764412069298 0.0007045974986788797 0.0032516773451277464 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.Y362Ifs*20|1|0.29|ENSG00000131558|chr7:133374899-133374900|-/G|frameshift_variant'] 72066 3902 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 20.052 2 0.1468429842169004 0.0007045974986788797 0.00325202644965499 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 104414 18015 SQLEDAIRL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 74.311 2 0.14683538906569352 0.0007045974986788797 0.0032525955330579737 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 117373 11931 TVPIYEGY True H1975_Epitope_Rep3 940.4541987647199 940.4536549679301 51.048 1 0.1468331416078466 0.0007045974986788797 0.0032527639477646923 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000415776.1_1_Y:19869357-19869702:-|nuORF', 'ENST00000415794.1_1_3:139212993-139213512:+|nuORF'] 48254 13618 IYQKYIARF True PC9_epitope_Rep1 1200.6655289436396 1200.6638849037902 57.237 3 0.1468319173963878 0.0007045974986788797 0.0032528556884899055 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 1360 7234 AEEAEILHSA True H1975_Epitope_Rep3 1068.5087535187201 1068.5076499358602 32.797 2 0.14682173077962032 0.0007045974986788797 0.0032536191593434847 ['ENSG00000169905|ENST00000609928|TOR1AIP2', 'TOR1AIP2|p.S241Lfs*68|1|0.42|ENSG00000169905|chr1:179846764-179846764|G/-|frameshift_variant'] 109857 9358 TEEPLEVSA True H1975_Epitope_Rep2 973.4604063439699 973.45985496793 40.958 1 0.14682167260301285 0.0007045974986788797 0.003253623520100109 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1', 'ALMS1|p.Y811*|1|0.24|ENSG00000116127|chr2:73448959-73448966|ACTCACAC/-|frameshift_variant', 'ALMS1|p.T1608Dfs*2|1|0.12|ENSG00000116127|chr2:73451340-73451341|-/A|frameshift_variant', 'ALMS1|p.A2503Cfs*22|1|0.17|ENSG00000116127|chr2:73454032-73454033|-/C|frameshift_variant', 'ALMS1|p.A2503Dfs*23|1|0.16|ENSG00000116127|chr2:73454034-73454035|-/ATTC|frameshift_variant'] 90990 16886 RFEEAHFTF True PC9_epitope_Rep3 1182.5458077337796 1182.54415490379 70.107 3 0.1468133707109987 0.0007045974986788797 0.0032542458664198896 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 70918 20010 LYFHINQTL True PC9_epitope_Rep1 1147.60259433391 1147.6014899358602 81.795 2 0.14681336857133015 0.0007045974986788797 0.0032542460268341084 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 78234 10885 NYGHVYAVF True NCI_RA007_Epitope_Rep3 1068.5028802926397 1068.5017899358602 49.889 2 0.1468129841179899 0.0007045974986788797 0.003254274850015559 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 108814 7217 SYTSVKENF True NCI_RA007_Epitope_Rep5 1073.5029398622898 1073.50184993586 34.439 2 0.1468124732285969 0.0007045974986788797 0.0032543131527356974 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 78437 18886 NYLSIFRKF True PC9_epitope_Rep4 1186.6498788795 1186.6487899358601 80.731 2 0.14680889213658968 0.0007045974986788797 0.003254581649197153 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 74558 19256 NFTNVAATF True PC9_epitope_Rep4 983.4712458111899 983.47014993586 82.172 2 0.14680427527834253 0.0007045974986788797 0.0032549278359211434 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 116884 19964 TVFDEAIRAV True PC9_epitope_Rep2 1119.59242357303 1119.5913299358601 82.191 2 0.14680208252610413 0.0007045974986788797 0.0032550922682872572 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 76960 8104 NRDVPNETL True PC9_epitope_Rep3 1056.51998690876 1056.5188899358602 36.149 2 0.14680070699342976 0.0007045974986788797 0.0032551954223659996 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.V235A|1|0.18|ENSG00000205339|chr11:9417126-9417126|T/C|missense_variant', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 87384 8079 QPTSVLDKATA True PC9_epitope_Rep2 1129.59790287629 1129.5968099358602 36.434 2 0.1467977560387877 0.0007045974986788797 0.0032554167316077728 ['ENSG00000165507|ENST00000298295|DEPP1'] 5371 9114 ALSGHLETV True PC9_epitope_Rep2 925.48689587533 925.48578993586 40.397 2 0.14679485825516433 0.0007045974986788797 0.0032556340678053333 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 106413 3376 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 18.812 3 0.14679122863202426 0.0007045974986788797 0.003255906312933417 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 89473 15854 QYFPKAPEF True PC9_epitope_Rep6 1125.5494961318898 1125.54838993586 73.253 2 0.14678806197347277 0.0007045974986788797 0.003256143851224336 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 52673 19001 KLVGEFLEV True PC9_epitope_Rep4 1032.5855472874398 1032.5844499358602 81.178 2 0.1467848144884416 0.0007045974986788797 0.0032563874703919284 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 141627 15100 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.49117496793 63.336 1 0.1467846456725624 0.0007045974986788797 0.0032564001350825827 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 40835 4954 HSDQITASSQY True H1975_Epitope_Rep2 1235.54184455215 1235.54074993586 24.139 2 0.14678348630386054 0.0007045974986788797 0.0032564871130932537 ['ENSG00000099250|ENST00000374867|NRP1', 'nc|ENSG00000099250|O14786-3|NRP1', 'nc|ENSG00000099250|O14786-2|NRP1'] 77481 17264 NTATIFHEL True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 71.225 2 0.14678288739597545 0.0007045974986788797 0.0032565320451890217 ['ENSG00000183735|ENST00000331710|TBK1'] 21239 14662 ERDPSPWAV True PC9_epitope_Rep3 1055.50360856863 1055.5025099358602 61.532 2 0.1467793766043843 0.0007045974986788797 0.0032567954490509733 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 21538 21568 ERNDLIVFL True PC9_epitope_Rep3 1117.6131590176099 1117.61206993586 88.256 2 0.1467703507098798 0.0007045974986788797 0.003257472731319775 ['ENSG00000129636|ENST00000320640|ITFG1'] 78317 15384 NYIRITSEI True PC9_epitope_Rep4 1107.59242357303 1107.5913299358601 67.106 2 0.14676954465350703 0.0007045974986788797 0.00325753322273939 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 23492 4328 EVVEEAENGR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.51987496793 21.472 1 0.14676748993388455 0.0007045974986788797 0.003257687426569214 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 17391 12743 EHDPQYAVI True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 54.037 2 0.14675969212105466 0.0007045974986788797 0.003258272707547454 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 62176 13948 LLENDVSTLGY True H1975_Epitope_Rep3 1222.60813320682 1222.60702993586 58.967 2 0.14675747939056402 0.0007045974986788797 0.0032584388076572846 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 16345 13455 EEIEGLISA True H1975_Epitope_Rep2 959.4811417885498 959.4805949679301 56.888 1 0.14675716417762427 0.0007045974986788797 0.0032584624700147877 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 96319 20706 RYSIAFPLL True PC9_epitope_Rep4 1078.61751612206 1078.61640993586 87.806 2 0.1467525374171897 0.0007045974986788797 0.003258809810631492 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 134502 9654 VYQHLFTRI True NCI_RA007_Epitope_Rep4 1175.6451278522297 1175.64349490379 43.985 3 0.14674963704330307 0.0007045974986788797 0.0032590275665597543 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 78388 21832 NYLDRFLSL True PC9_epitope_Rep2 1139.59750895347 1139.59640993586 89.452 2 0.14674253207340493 0.0007045974986788797 0.003259561058686039 ['ENSG00000110092|ENST00000227507|CCND1'] 95801 20018 RYINNPLLI True PC9_epitope_Rep1 1114.6498788795 1114.6487899358601 81.825 2 0.14674019307612882 0.0007045974986788797 0.003259736706385258 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 49304 3506 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 18.334 2 0.14673762534446516 0.0007045974986788797 0.0032599295417989516 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 140197 10995 YQVAAAESHPL True PC9_epitope_Rep1 1184.5825871653199 1184.5814899358602 47.181 2 0.14673488793647402 0.0007045974986788797 0.0032601351323155183 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 58750 8490 LESDPQQVV True H1975_Epitope_Rep3 1013.5029398622901 1013.50184993586 37.642 2 0.1467250060162324 0.0007045974986788797 0.0032608774121550732 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-2|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 75204 12049 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.4842749679299 51.357 1 0.14671924224466068 0.0007045974986788797 0.003261310435098599 ['ENSG00000116285|ENST00000377482|ERRFI1'] 21774 14800 ERVPINDVL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 64.867 2 0.14671766736270528 0.0007045974986788797 0.003261428763407753 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 89809 13657 RALNQEQVIAV True PC9_epitope_Rep1 1239.6935345966301 1239.6924299358602 57.387 2 0.14671466387395873 0.0007045974986788797 0.0032616544415172803 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 104820 11080 SRAEDYEVL True PC9_epitope_Rep4 1080.50875351872 1080.5076499358602 50.396 2 0.14670088874562498 0.0007045974986788797 0.003262689685090629 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 111109 12724 THEDGVLEL True PC9_epitope_Rep6 1011.48728979815 1011.48618993586 60.428 2 0.14669578531562355 0.0007045974986788797 0.003263073306606863 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 41390 8972 HYEVEILDAK True NCI_RA007_Epitope_Rep1 1215.6135529404298 1215.61244993586 38.9 2 0.1466935726338633 0.0007045974986788797 0.0032632396463946273 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000596073.5_1_19:14640508-14673988:+|nuORF', 'ENST00000600083.5_1_19:14640508-14673988:+|nuORF', 'nc|ENSG00000099797|Q9NZ01-2|TECR'] 17401 17894 EHDPQYAVIL True PC9_epitope_Rep5 1183.5873381925899 1183.58624993586 73.847 2 0.1466904481427087 0.0007045974986788797 0.0032634745464045533 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 44036 18204 IIIPEIQKV True PC9_epitope_Rep4 1051.66413196131 1051.66302993586 78.09 2 0.1466900778180596 0.0007045974986788797 0.0032635023886167804 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 99870 13922 SILPAIFQK True NCI_RA007_Epitope_Rep5 1015.6066170851899 1015.60552993586 60.235 2 0.14668882150997042 0.0007045974986788797 0.003263596843706959 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 91973 6094 RKQATAIVL True NCI_RA007_Epitope_Rep4 998.6236641316598 998.62256993586 30.056 2 0.14668401497902503 0.0007045974986788797 0.003263958246173063 ['ENSG00000091157|ENST00000254442|WDR7', 'nc|ENSG00000091157|Q9Y4E6-2|WDR7'] 73688 20669 MYPRLGGFVM True PC9_epitope_Rep3 1169.5725571589298 1169.57144993586 84.776 2 0.14668315325466005 0.0007045974986788797 0.0032640230433278496 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF'] 108327 17898 SYKNGFLNL True PC9_epitope_Rep2 1054.54474510462 1054.54364993586 74.148 2 0.14667508852453598 0.0007045974986788797 0.0032646295307597246 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 14241 15920 DSLIFLVDASK True NCI_RA007_Epitope_Rep2 1206.6496040959798 1206.6485099358601 66.643 2 0.1466673606967036 0.0007045974986788797 0.003265210787443442 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant', 'ENST00000464116.2_1_22:42018008-42024264:+|nuORF'] 89028 21698 QVLEDFPTI True PC9_epitope_Rep3 1060.54407639828 1060.5429699358601 88.753 2 0.1466593461555928 0.0007045974986788797 0.0032658137182688543 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 110100 3423 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 17.953 2 0.14665509695361142 0.0007045974986788797 0.0032661334289927338 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 31651 9977 GEFQSFSSA True NCI_RA007_Epitope_Rep4 958.4032258210199 958.40267496793 45.22 1 0.146654448124582 0.0007045974986788797 0.0032661822497446953 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 54565 7733 KYISKPENL True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 34.566 2 0.1466518978073456 0.0007045974986788797 0.0032663741538701174 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 106405 3668 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 18.916 3 0.14665022299130864 0.0007045974986788797 0.0032665001851167183 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 48658 12373 KASDLYITL True NCI_RA007_Epitope_Rep4 1022.56481184286 1022.56427496793 54.589 1 0.146639119975087 0.0007045974986788797 0.0032673358182567125 ['ENSG00000143418|ENST00000368954|CERS2'] 129095 17974 VQPSLFYHL True PC9_epitope_Rep6 1102.58113061334 1102.58002993586 81.764 2 0.14663728495354747 0.0007045974986788797 0.0032674739457725205 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 140212 16512 YQVGVHYEL True PC9_epitope_Rep1 1106.5396597241802 1106.53856993586 68.337 2 0.14663457374058658 0.0007045974986788797 0.0032676780374429203 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 93039 7931 RPLLKAITA True PC9_epitope_Rep6 981.63350053937 981.63240993586 39.948 2 0.14662952253176711 0.0007045974986788797 0.0032680583105228317 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 40792 19475 HRYEFLETL True PC9_epitope_Rep1 1206.6033226098998 1206.6022299358601 79.727 2 0.1466267093153359 0.0007045974986788797 0.0032682701186024735 ['ENSG00000163545|ENST00000367157|NUAK2'] 95143 18405 RVFSDIIYTV True PC9_epitope_Rep6 1211.65502382959 1211.65392993586 83.44 2 0.14662429504815733 0.0007045974986788797 0.003268451900532214 ['ENSG00000125676|ENST00000245838|THOC2'] 134032 8309 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 41.587 3 0.14662304066851237 0.0007045974986788797 0.003268546352851213 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 135140 12266 WEIENNPTV True H1975_Epitope_Rep3 1100.51383889916 1100.5132749679299 52.359 1 0.14662217257452753 0.0007045974986788797 0.0032686117202091053 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 89023 5528 QVLDTSVAK True NCI_RA007_Epitope_Rep4 959.52876068731 959.52766993586 27.859 2 0.1466211377439125 0.0007045974986788797 0.0032686896445106653 ['ENSG00000174718|ENST00000312561|RESF1'] 11737 11355 DHASIQMNV True PC9_epitope_Rep2 1013.46002950449 1013.4589299358599 49.0 2 0.1466181966746879 0.0007045974986788797 0.003268911121531386 ['ENSG00000171858|ENST00000343986|RPS21'] 96079 13771 RYLTVATVF True NCI_RA007_Epitope_Rep2 1068.59678067748 1068.59568993586 58.214 2 0.14660139181405465 0.0007045974986788797 0.0032701768966676512 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 68332 16101 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.52277496793 67.39 1 0.14660036574279384 0.0007045974986788797 0.003270254198156311 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 25417 9163 FEDETIRNI True H1975_Epitope_Rep1 1135.55095268387 1135.54984993586 40.152 2 0.14659922704561074 0.0007045974986788797 0.0032703399867103225 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 2222 6264 AEMPQNYRP True NCI_RA007_Epitope_Rep3 1104.5022286696399 1104.50112993586 31.641 2 0.14659624067527469 0.0007045974986788797 0.0032705649881425466 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 116401 18158 TTILQLHEI True PC9_epitope_Rep2 1066.6022599807402 1066.60116993586 75.149 2 0.14659539477012878 0.0007045974986788797 0.0032706287237820905 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 97599 5940 SEEVPGTSP True H1975_Epitope_Rep3 901.4028914678499 901.40234496793 27.857 1 0.1465952118929126 0.0007045974986788797 0.0032706425030263994 ['ENSG00000164715|ENST00000297293|LMTK2'] 54563 4842 KYISKPENL True NCI_RA007_Epitope_Rep5 1090.60225998074 1090.60116993586 25.316 2 0.14659514573200624 0.0007045974986788797 0.0032706474880645144 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 39062 9862 HHSNLIAGM True PC9_epitope_Rep1 978.47053461854 978.46942993586 42.793 2 0.1465915248925943 0.0007045974986788797 0.0032709203196456802 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 32883 7678 GHSGPITSI True PC9_epitope_Rep2 867.4450310633501 867.44392993586 34.903 2 0.14658871944390853 0.0007045974986788797 0.003271131726794785 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 95641 19794 RYDPFSNTW True PC9_epitope_Rep3 1184.5250722892 1184.5239699358601 81.369 2 0.14658361320272498 0.0007045974986788797 0.0032715165471328307 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 55677 23436 LALFPGVAL True PC9_epitope_Rep1 899.5480395799099 899.5474949679301 94.93 1 0.14657846803695887 0.0007045974986788797 0.0032719043464624537 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 142571 21374 YYLNEIQSF True PC9_epitope_Rep5 1175.5498900547097 1175.54937496793 87.276 1 0.14657549039019035 0.0007045974986788797 0.003272128797316305 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 71464 15515 LYVGKTSLI True PC9_epitope_Rep2 992.59063266788 992.58952993586 64.954 2 0.14657149827772598 0.0007045974986788797 0.003272429741198729 ['ENSG00000100228|ENST00000263116|RAB36'] 21264 11589 ERDSALETL True PC9_epitope_Rep1 1032.50875351872 1032.5076499358602 49.454 2 0.14657063537158066 0.0007045974986788797 0.003272494794667967 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 3282 6266 AGFAGDDAPR True PC9_epitope_Rep5 975.4410083120698 975.43990993586 29.079 2 0.14656524166681814 0.0007045974986788797 0.0032729014488011568 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 35848 9193 GTLSSWNLK True NCI_RA007_Epitope_Rep3 1004.52909504048 1004.52798993586 43.255 2 0.1465645371263494 0.0007045974986788797 0.003272954570786283 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 89628 12462 QYSDINNRW True PC9_epitope_Rep3 1194.5417849825 1194.5406899358602 52.959 2 0.14656255831664927 0.0007045974986788797 0.0032731037765944214 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 117933 15638 TWTEVSYTF True NCI_RA007_Epitope_Rep4 1132.5076908895599 1132.5065899358601 67.928 2 0.14655640186770538 0.0007045974986788797 0.003273568027163673 ['ENSG00000116663|ENST00000376753|FBXO6'] 62380 18272 LLGPRLVLA True PC9_epitope_Rep4 950.6276868829399 950.62658993586 78.354 2 0.14654954922859145 0.0007045974986788797 0.0032740848536105347 ['ENSG00000170348|ENST00000303575|TMED10'] 128715 13058 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 55.234 2 0.14654742952945274 0.0007045974986788797 0.0032742447378731583 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 71154 19996 LYMDKFEEF True PC9_epitope_Rep2 1220.5423621461198 1220.54126993586 82.317 2 0.14654295876010906 0.0007045974986788797 0.003274581983665077 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG', 'ENST00000445715.5_1_Y:21755293-21766003:+|nuORF'] 87005 18136 QMISRIEYI True PC9_epitope_Rep5 1151.60088008175 1151.5997899358601 74.771 2 0.14654157376479704 0.0007045974986788797 0.003274686465719581 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 88152 15378 QRVDNIEVL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 63.969 2 0.1465360469434474 0.0007045974986788797 0.003275103434179383 ['ENSG00000197442|ENST00000359015|MAP3K5'] 105315 9613 SRPENAIIY True PC9_epitope_Rep4 1061.5505587610498 1061.54946993586 44.602 2 0.14653228375164373 0.0007045974986788797 0.0032753873766387456 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 106251 15034 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.5586299358602 63.077 2 0.14652111342423368 0.0007045974986788797 0.0032762303506110643 ['ENSG00000131459|ENST00000253778|GFPT2'] 108834 20960 SYVRSLPFF True PC9_epitope_Rep5 1114.5811306133398 1114.58002993586 85.682 2 0.14651898751825246 0.0007045974986788797 0.003276390807529717 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 2063 8799 AELDDTPMR True PC9_epitope_Rep3 1046.47025983502 1046.46916993586 38.797 2 0.14651460206828198 0.0007045974986788797 0.0032767218326416538 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 141367 7617 YTEDSPGLKV True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 34.279 2 0.1465115346062274 0.0007045974986788797 0.003276953392378905 ['ENSG00000106803|ENST00000223641|SEC61B'] 75228 14755 NIDPITMAY True H1975_Epitope_Rep1 1036.48993265044 1036.4888299358602 61.978 2 0.14651071089449014 0.0007045974986788797 0.003277015576350602 ['ENSG00000116285|ENST00000377482|ERRFI1'] 126812 14487 VLPSIVNEVLK True H1975_Epitope_Rep1 1209.7332741502898 1209.7321699358602 60.924 2 0.14650783327488404 0.0007045974986788797 0.0032772328239549006 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000544888.5_1_12:7077022-7079603:-|nuORF'] 41207 15691 HVLDDFVKV True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 68.282 2 0.1465036200630029 0.0007045974986788797 0.0032775509287241056 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 54918 11365 KYPSDLPYM True NCI_RA007_Epitope_Rep5 1112.5212327787199 1112.52012993586 50.366 2 0.14650095255231904 0.0007045974986788797 0.0032777523462561857 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG'] 54922 16232 KYPSPFFVF True NCI_RA007_Epitope_Rep3 1130.5800679841798 1130.5789699358602 71.536 2 0.14649355469993486 0.0007045974986788797 0.003278311005290932 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 40637 8777 HRNDELTSL True PC9_epitope_Rep5 1083.53088594563 1083.5297899358602 38.703 2 0.14649309804571223 0.0007045974986788797 0.0032783454932670247 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 55028 20729 KYSDITIMF True PC9_epitope_Rep5 1116.5525329069999 1116.5514299358601 84.793 2 0.14648818520219864 0.0007045974986788797 0.0032787165496170933 ['nc|ENSG00000130005|Q14353-2|GAMT', 'ENSG00000130005|ENST00000252288|GAMT'] 31786 14541 GEIENIELP True H1975_Epitope_Rep2 1012.5076908895599 1012.50717496793 61.089 1 0.1464875559909342 0.0007045974986788797 0.0032787640755871958 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 7334 11057 ARPPGYEF True PC9_epitope_Rep5 935.45011644379 935.44900993586 47.518 2 0.1464853859882052 0.0007045974986788797 0.0032789279868151748 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 94711 6566 RSDPTSYAGY True H1975_Epitope_Rep2 1115.4883524273098 1115.48724993586 30.167 2 0.1464828401651101 0.0007045974986788797 0.0032791202960327256 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 115784 9125 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4445749679298 40.051 1 0.14647972835375103 0.0007045974986788797 0.003279355374732435 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 138131 20133 YGIPAIVKL True PC9_epitope_Rep2 972.60080342876 972.59970993586 82.852 2 0.1464770236881167 0.0007045974986788797 0.0032795597096232382 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 64488 17636 LPQLPITNF True H1975_Epitope_Rep3 1041.58588164061 1041.58537496793 73.685 1 0.1464689679431641 0.0007045974986788797 0.003280168388420802 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 115889 5133 TSERTVLRY True H1975_Epitope_Rep3 1123.5985715826298 1123.59746993586 24.848 2 0.14646409849977604 0.0007045974986788797 0.003280536369994117 ['ENSG00000204560|ENST00000376442|DHX16'] 128770 17592 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 72.946 2 0.14646221473624468 0.0007045974986788797 0.0032806787361384796 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 44311 14515 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep2 1067.5208988059899 1067.52037496793 60.99 1 0.14646094218920594 0.0007045974986788797 0.0032807749128406483 ['ENSG00000138160|ENST00000260731|KIF11'] 11899 17176 DHIRVIVQL True PC9_epitope_Rep5 1091.64512785223 1091.64402993586 71.09 2 0.14645916422246916 0.0007045974986788797 0.003280909292903661 ['ENSG00000160445|ENST00000291900|ZER1'] 136423 19918 WVDETLSSV True PC9_epitope_Rep3 1034.49204082542 1034.49094993586 81.855 2 0.14645168872247116 0.0007045974986788797 0.0032814743566934442 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 141024 17645 YSLDHISSL True PC9_epitope_Rep1 1033.5080252427301 1033.5069299358602 72.664 2 0.1464510626925026 0.0007045974986788797 0.0032815216819142533 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 8430 5968 ATNGPPVLVK True NCI_RA007_Epitope_Rep3 994.58113061334 994.58002993586 30.456 2 0.1464486782643062 0.0007045974986788797 0.0032817019408268476 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 1350 5809 AEEAARLSVA True H1975_Epitope_Rep1 1015.5298233164699 1015.52872993586 27.416 2 0.14644429000680198 0.0007045974986788797 0.0032820337117236737 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 65295 8615 LQYYDISAK True H1975_Epitope_Rep1 1099.5549754351498 1099.5538699358601 38.066 2 0.14643911132417045 0.0007045974986788797 0.0032824252850145587 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 26875 16266 FLDFHALPY True H1975_Epitope_Rep2 1121.5545815123298 1121.5534899358602 67.78 2 0.14643824807706535 0.0007045974986788797 0.003282490561827819 ['ENSG00000148334|ENST00000338961|PTGES2', 'ENST00000277462.9_1_9:130887138-130890631:-|nuORF', 'ENST00000474124.5_1_9:130886092-130889945:-|nuORF'] 55073 19697 KYVENFGLI True PC9_epitope_Rep5 1081.5807962601698 1081.5796899358602 80.816 2 0.1464364729440498 0.0007045974986788797 0.0032826247974677377 ['ENSG00000118363|ENST00000263672|SPCS2', 'ENST00000561636.2_1_15:43423309-43423531:+|nuORF'] 104991 14365 SRDKTIIMW True PC9_epitope_Rep2 1148.60121443492 1148.60010993586 60.517 2 0.14643437081167657 0.0007045974986788797 0.003282783767872564 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 118261 18456 TYLEKFQNL True PC9_epitope_Rep5 1154.5971746002997 1154.5960699358602 76.012 2 0.14643324797384003 0.0007045974986788797 0.003282868683827498 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 128779 18707 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 77.18 2 0.14643301226745487 0.0007045974986788797 0.0032828865096822483 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 96084 13087 RYLTVATVF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 57.017 2 0.14642591084676723 0.0007045974986788797 0.003283423616603354 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 124742 12349 VHAQIVSTL True PC9_epitope_Rep1 966.5498304850599 966.54872993586 52.357 2 0.1464255286364695 0.0007045974986788797 0.003283452527070624 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 124752 18651 VHAYIISSL True PC9_epitope_Rep3 1001.55458151233 1001.55348993586 76.959 2 0.146424263698737 0.0007045974986788797 0.0032835482090314517 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 42392 9819 IEDFEARIA True H1975_Epitope_Rep3 1062.53457434374 1062.53346993586 42.795 2 0.146421881404284 0.0007045974986788797 0.003283728417210513 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 74524 22207 NFLPPIIARF True PC9_epitope_Rep1 1186.6862643882198 1186.6851699358601 90.24 2 0.14641329801582817 0.0007045974986788797 0.0032843777874256245 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 85340 5973 QESTVIRAP True NCI_RA007_Epitope_Rep5 999.5349086969098 999.53380993586 29.659 2 0.14641290780693822 0.0007045974986788797 0.003284407311438488 ['ENSG00000128849|ENST00000281282|CGNL1'] 108676 18135 SYQKVIELF True PC9_epitope_Rep6 1125.6070110080097 1125.60647496793 82.393 1 0.1464006956129816 0.0007045974986788797 0.0032853314446932426 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 35878 5396 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep3 1016.46708941132 1016.46598993586 28.235 2 0.1463971900979653 0.0007045974986788797 0.003285596765254232 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 141162 7301 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.4183249679301 33.021 1 0.14638614211869488 0.0007045974986788797 0.003286433088767998 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 85782 4803 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 23.845 2 0.14638166536139596 0.0007045974986788797 0.0032867720360977154 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 110217 5416 TEQPSVSP True H1975_Epitope_Rep2 843.3974121645899 843.39686496793 25.86 1 0.1463793392448123 0.0007045974986788797 0.003286948166358102 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.I804Yfs*16|1|0.14|ENSG00000197056|chr1:35114240-35114240|A/-|frameshift_variant', 'ZMYM1|p.D473Mfs*48|1|0.09|ENSG00000197056|chr1:35113241-35113241|A/-|frameshift_variant'] 141701 16331 YTVEDIQRL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 70.78 2 0.1463781169613293 0.0007045974986788797 0.003287040719696889 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 68058 11961 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48076993586 51.166 2 0.1463698479935138 0.0007045974986788797 0.003287666927756278 ['ENSG00000174231|ENST00000304992|PRPF8'] 19771 6114 ELSEALTR True H1975_Epitope_Rep3 917.4818104948899 917.48070993586 28.529 2 0.14636931275748846 0.0007045974986788797 0.003287707465210752 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1'] 94883 8759 RTDAILLGHY True H1975_Epitope_Rep1 1157.61930702721 1157.61820993586 38.623 2 0.14636589677429993 0.0007045974986788797 0.0032879661950463296 ['nc|ENSG00000112146|Q9UK97-3|FBXO9', 'ENSG00000112146|ENST00000323557|FBXO9', 'nc|ENSG00000112146|Q9UK97|FBXO9', 'ENST00000474457.1_1_6:52958219-52962625:+|nuORF'] 133122 21132 VVQPLLVSV True PC9_epitope_Rep1 952.5957180483199 952.59462993586 86.114 2 0.14636084362313093 0.0007045974986788797 0.0032883489626722644 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 24478 18325 FAEGFVRAL True PC9_epitope_Rep4 1008.5392658013598 1008.53816993586 78.555 2 0.14635886117172311 0.0007045974986788797 0.003288499142101344 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 142879 16788 YYTPITPHL True PC9_epitope_Rep4 1103.56514619603 1103.56404993586 72.544 2 0.14635693228264365 0.0007045974986788797 0.0032886452704930977 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 9639 19809 AYDDKIYYF True PC9_epitope_Rep1 1196.5389910178399 1196.5378899358602 81.011 2 0.1463519432771524 0.0007045974986788797 0.00328902325651285 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 86230 12743 QILEKDAVIKV True PC9_epitope_Rep2 1254.75473787086 1254.7531049037902 54.32 3 0.14634764978984816 0.0007045974986788797 0.0032893485820105614 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 92894 9983 RPFQSLIHA True PC9_epitope_Rep6 1067.58761297611 1067.58650993586 48.953 2 0.1463472655315587 0.0007045974986788797 0.0032893776995336554 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 48016 13509 IYLLIHNNF True NCI_RA007_Epitope_Rep3 1145.62332977849 1145.62222993586 60.427 2 0.1463465192849266 0.0007045974986788797 0.0032894342477863335 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 77694 22126 NTIPLFVQL True PC9_epitope_Rep4 1043.60153170475 1043.6004299358601 93.323 2 0.14634609599977264 0.0007045974986788797 0.00328946632345057 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 50004 10679 KIYEGQVEV True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 46.39 2 0.1463379283706107 0.0007045974986788797 0.0032900853102094635 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 132196 17106 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 70.623 2 0.1463336052502945 0.0007045974986788797 0.003290412986327249 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 107740 5201 SVSLPSVKK True NCI_RA007_Epitope_Rep4 943.57023157647 943.56912993586 26.538 2 0.146333049174614 0.0007045974986788797 0.0032904551371090657 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A', 'RNF19A|p.R281Vfs*13|1|0.05|ENSG00000034677|chr8:100274980-100274995|TAATGGATGAAGAACG/-|frameshift_variant'] 134337 6940 VYPDGIRHI True NCI_RA007_Epitope_Rep4 1068.5716285587998 1068.5705299358601 33.317 2 0.14633226411422215 0.0007045974986788797 0.00329051464594691 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 14999 15468 DYKESFNTI True PC9_epitope_Rep3 1115.5135045459901 1115.5124099358602 64.65 2 0.1463264396905827 0.0007045974986788797 0.0032909561800253655 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 68053 11914 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48076993586 50.907 2 0.1463246250382842 0.0007045974986788797 0.003291093756028066 ['ENSG00000174231|ENST00000304992|PRPF8'] 54260 18355 KWNPTAGVAF True PC9_epitope_Rep5 1089.56072952193 1089.5596299358601 75.619 2 0.14630543168158766 0.0007045974986788797 0.0032925492307885568 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 108217 19848 SYIALPLTL True NCI_RA007_Epitope_Rep2 989.57973363101 989.57918496793 82.197 1 0.146301273930742 0.0007045974986788797 0.003292864606563559 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 93321 6781 RPSPPVQSV True PC9_epitope_Rep5 965.52942939365 965.52832993586 31.054 2 0.14630077116903104 0.0007045974986788797 0.0032929027443289734 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 96133 20024 RYPAIIYNI True PC9_epitope_Rep1 1121.62332977849 1121.62222993586 81.849 2 0.14629115674510454 0.0007045974986788797 0.0032936321457920094 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1'] 14100 21237 DRYQYPFVL True PC9_epitope_Rep1 1199.5975089534697 1199.59640993586 86.512 2 0.146288657752918 0.0007045974986788797 0.0032938217589632206 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 7698 4346 ASLVGQTSPK True NCI_RA007_Epitope_Rep4 986.53965972418 986.53856993586 23.064 2 0.14628491734391483 0.0007045974986788797 0.0032941055859760883 ['ENSG00000055044|ENST00000264279|NOP58'] 86037 10694 QHQSGIVQL True PC9_epitope_Rep1 1008.5352430500798 1008.53414993586 46.025 2 0.1462843456470457 0.0007045974986788797 0.0032941489692068673 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 75781 18829 NLLTHIENV True PC9_epitope_Rep1 1051.5662088251902 1051.5651099358602 77.212 2 0.14628140494359132 0.0007045974986788797 0.0032943721335354785 ['ENSG00000129292|ENST00000395386|PHF20L1', 'EFR3A-PHF20L1|1|fusion', 'ENST00000477051.1_1_8:133854703-133858165:+|nuORF'] 126779 17642 VLPKLYVKL True PC9_epitope_Rep5 1071.7056028504699 1071.7045099358602 72.872 2 0.14627713384253208 0.0007045974986788797 0.0032946962859474543 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000471178.2_1_19:35024355-35024547:-|nuORF', 'ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 42783 5894 IENIQRVAA True H1975_Epitope_Rep2 1012.5665431783599 1012.56544993586 27.657 2 0.14627207501475542 0.0007045974986788797 0.0032950802633824276 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 57431 6500 LEATPDTPA True H1975_Epitope_Rep3 913.4392769765699 913.43872496793 29.972 1 0.14626844070703476 0.0007045974986788797 0.003295356143712456 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP', 'PFKL|p.V335M|1|0.61|ENSG00000141959|chr21:44318536-44318536|G/A|missense_variant', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 75831 17666 NLPDEIYHV True PC9_epitope_Rep5 1098.5345743437401 1098.53346993586 72.966 2 0.14626272543750485 0.0007045974986788797 0.0032957900363218577 ['ENSG00000148335|ENST00000372483|NTMT1'] 73326 9066 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46397496793 39.858 1 0.14626016589950325 0.0007045974986788797 0.003295984370088815 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 48112 15260 IYNQVKQII True PC9_epitope_Rep3 1117.64954452633 1117.64844993586 63.847 2 0.14624659530421927 0.0007045974986788797 0.003297014912342647 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 35124 18642 GQWASVIRV True PC9_epitope_Rep1 1014.5610638750999 1014.55996993586 76.495 2 0.14624559892397235 0.0007045974986788797 0.0032970905894378444 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 38844 4356 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 23.199 2 0.14622727113052736 0.0007045974986788797 0.0032984829304902237 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 6368 5188 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 26.654 2 0.14622614506743808 0.0007045974986788797 0.003298568495244979 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 109813 8410 TEEEQIAYA True H1975_Epitope_Rep3 1052.4662200003997 1052.4651299358602 37.333 2 0.14622216305569766 0.0007045974986788797 0.003298871089114587 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 31328 16346 GDLGIEIPAEK True PC9_epitope_Rep5 1140.60265390356 1140.60154993586 67.872 2 0.14622084587039283 0.0007045974986788797 0.003298971188363401 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 104280 15806 SQIHDIVLV True PC9_epitope_Rep4 1022.5760452328999 1022.57494993586 68.721 2 0.14621891021100403 0.0007045974986788797 0.0032991182939127207 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 52463 7973 KKTEVVITL True NCI_RA007_Epitope_Rep4 1029.6433965167298 1029.6422899358602 37.422 2 0.1462181757925754 0.0007045974986788797 0.00329917410968804 ['ENSG00000183735|ENST00000331710|TBK1'] 12087 7353 DHVTATQL True PC9_epitope_Rep1 883.4399456829101 883.43884993586 33.094 2 0.14621465371621864 0.0007045974986788797 0.0032994418004168445 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 116228 12615 TTDDPALLY True H1975_Epitope_Rep3 1007.4811417885498 1007.48057496793 53.729 1 0.14621226629622697 0.0007045974986788797 0.0032996232653765703 ['ENSG00000182749|ENST00000675840|PAQR7'] 74810 11189 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.4657899358601 48.026 2 0.1462093928155702 0.0007045974986788797 0.0032998416883879647 ['ENSG00000144597|ENST00000396842|EAF1'] 45881 9071 ISDSDYQAEY True H1975_Epitope_Rep3 1189.47751296009 1189.47697496793 39.877 1 0.14620597753867962 0.0007045974986788797 0.0033001013138636874 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 48418 15728 IYVPDIRNVF True NCI_RA007_Epitope_Rep3 1234.6710082469 1234.66990993586 69.505 2 0.14619910267283087 0.0007045974986788797 0.0033006239949510945 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 71906 5564 MEQGRVTIA True H1975_Epitope_Rep2 1003.5120650773498 1003.51096993586 26.411 2 0.14619778060498745 0.0007045974986788797 0.0033007245183262206 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 78071 21730 NVVEQFLQA True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 88.415 2 0.14619770155416925 0.0007045974986788797 0.0033007305290484287 ['ENSG00000121060|ENST00000316881|TRIM25'] 4484 17744 AIVKEIVNI True PC9_epitope_Rep5 997.6171817688898 997.61608993586 73.27 2 0.14619390860372075 0.0007045974986788797 0.0033010189432966016 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 105604 11299 SSDNIMVQY True H1975_Epitope_Rep3 1055.45936079815 1055.45877496793 48.567 1 0.14618832166107032 0.0007045974986788797 0.0033014438175366693 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 9528 14600 AVYDFFIGR True NCI_RA007_Epitope_Rep3 1086.5498304850598 1086.5487299358601 64.77 2 0.14617976195734123 0.0007045974986788797 0.003302094868925707 ['ENSG00000143815|ENST00000272163|LBR'] 136908 15732 YAFNMKATV True PC9_epitope_Rep5 1043.5110024481899 1043.5099099358602 65.512 2 0.146179221779926 0.0007045974986788797 0.0033021359591214948 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8'] 97905 13890 SEMLEIVQA True H1975_Epitope_Rep2 1018.5004973341398 1018.49940993586 58.572 2 0.14617874191006883 0.0007045974986788797 0.003302172462270527 ['ENSG00000115756|ENST00000307845|HPCAL1'] 49530 11341 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 48.628 2 0.14616439723964222 0.0007045974986788797 0.0033032638301225908 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 10072 7508 AYSVEHNQL True PC9_epitope_Rep4 1059.49852318819 1059.49742993586 36.246 2 0.1461624054208236 0.0007045974986788797 0.0033034153995637485 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 99869 13836 SILPAIFQK True NCI_RA007_Epitope_Rep5 1015.6066170851899 1015.60552993586 59.896 2 0.1461539046139504 0.0007045974986788797 0.0033040623546712142 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 97403 10548 SEDVTPMEV True H1975_Epitope_Rep3 1005.4324773439699 1005.43197496793 45.639 1 0.1461523371138981 0.0007045974986788797 0.003304181663237423 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 72025 8157 METDPQTISA True H1975_Epitope_Rep3 1091.48049016555 1091.4793899358601 36.355 2 0.14614912303159158 0.0007045974986788797 0.0033044263130200765 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 77144 5125 NRPGTVSSL True PC9_epitope_Rep4 929.49304388493 929.49194993586 26.37 2 0.14614425540736944 0.0007045974986788797 0.0033047968615307647 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 6944 16244 AQIKPFYTV True PC9_epitope_Rep5 1065.5858816406098 1065.58478993586 67.472 2 0.14614229456668976 0.0007045974986788797 0.0033049461424472185 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 108679 13397 SYQKVMALW True NCI_RA007_Epitope_Rep5 1124.5688516774799 1124.56774993586 58.218 2 0.14614124552711866 0.0007045974986788797 0.0033050260097140034 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 25213 12107 FDEESYSLLR True NCI_RA007_Epitope_Rep2 1257.5877321154098 1257.5866299358602 51.687 2 0.14613967585460946 0.0007045974986788797 0.0033051455182774394 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 26241 12826 FHEGDAYVV True PC9_epitope_Rep3 1035.4661604307498 1035.4650699358601 54.355 2 0.14613599716089293 0.0007045974986788797 0.0033054256160807913 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 48191 21306 IYPSPTGVLI True PC9_epitope_Rep3 1058.60119735158 1058.60067496793 87.249 1 0.14612673210849797 0.0007045974986788797 0.003306131166928443 ['ENSG00000174231|ENST00000304992|PRPF8'] 60582 14828 LHGNIITSL True PC9_epitope_Rep4 966.54983048506 966.54872993586 64.976 2 0.14612096871820413 0.0007045974986788797 0.0033065701352700933 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 54261 18395 KWNPTAGVAF True PC9_epitope_Rep5 1089.56072952193 1089.56017496793 75.775 1 0.14611940169099738 0.0007045974986788797 0.0033066894978391027 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 134774 17817 VYTTTVHWL True PC9_epitope_Rep4 1118.5760452329 1118.57494993586 76.566 2 0.14611745349927033 0.0007045974986788797 0.003306837900194992 ['ENSG00000174231|ENST00000304992|PRPF8'] 120433 5111 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.4238049679301 24.772 1 0.1461145809462229 0.0007045974986788797 0.0033070567273076655 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 98951 7450 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.47048993586 33.61 2 0.1461080333508485 0.0007045974986788797 0.0033075555678572055 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 115709 7888 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.5853349679301 38.141 1 0.14609389929594965 0.0007045974986788797 0.003308632651753893 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 101319 22008 SLINVGLISV True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 92.874 2 0.14608996577654185 0.0007045974986788797 0.003308932467126785 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 85910 14060 QHGGFVVTV True PC9_epitope_Rep1 942.4923156089399 942.49120993586 58.921 2 0.1460891082473774 0.0007045974986788797 0.0033089978321354588 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 74807 9734 NHDTGEYVL True PC9_epitope_Rep4 1046.46688870674 1046.46637496793 45.08 1 0.1460885939977045 0.0007045974986788797 0.0033090370313413726 ['ENSG00000144597|ENST00000396842|EAF1'] 140948 9956 YSEVYPGQQY True H1975_Epitope_Rep1 1232.5349682665599 1232.5338699358601 43.232 2 0.14608745949592392 0.0007045974986788797 0.003309123511529459 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 49439 8990 KEYDGVVVV True H1975_Epitope_Rep1 1006.5335117145797 1006.53240993586 39.486 2 0.14607895254952152 0.0007045974986788797 0.0033097720460284973 ['ENSG00000198695|ENST00000361681|MT-ND6'] 141834 5885 YVDGVEVH True NCI_RA007_Epitope_Rep4 916.42904664604 916.4279499358599 29.26 2 0.14607786636509054 0.0007045974986788797 0.0033098548613442334 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 53385 19648 KQVEEIFNL True PC9_epitope_Rep1 1118.5971746003 1118.5966749679299 80.4 1 0.1460768300380726 0.0007045974986788797 0.0033099338772392 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 74960 10097 NHNFSQQCL True PC9_epitope_Rep1 1089.46617751409 1089.46508993586 43.71 2 0.14606815159044695 0.0007045974986788797 0.0033105956486437914 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 84251 22540 PYNDYFEYF True PC9_epitope_Rep2 1256.50260550912 1256.5015099358602 92.193 2 0.1460610191637597 0.0007045974986788797 0.003311139627332814 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 99017 18027 SHDYSLYSL True PC9_epitope_Rep1 1083.48728979815 1083.48618993586 74.133 2 0.14605775390615347 0.0007045974986788797 0.0033113886929172667 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136'] 117057 14660 TVIENIHTI True PC9_epitope_Rep1 1038.57095985246 1038.5698699358602 61.211 2 0.14605457768649793 0.0007045974986788797 0.0033116309847810626 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant', 'USP24|p.V1215*|1|0.31|ENSG00000162402|chr1:55125751-55125751|C/-|frameshift_variant', 'USP24|p.A1582Qfs*15|1|0.1|ENSG00000162402|chr1:55107257-55107257|C/-|frameshift_variant'] 31985 5184 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 25.013 2 0.1460530735582647 0.0007045974986788797 0.0033117457304858364 ['ENSG00000108344|ENST00000264639|PSMD3'] 68340 15495 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.5746699358601 64.759 2 0.14604940274288164 0.0007045974986788797 0.003312025783241106 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 44077 22640 IILPEDIEL True PC9_epitope_Rep5 1053.59577761797 1053.59468993586 92.085 2 0.14604808667403393 0.0007045974986788797 0.003312126194107141 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 98258 10465 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 45.316 2 0.14604159264682925 0.0007045974986788797 0.0033126217070957725 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 97831 11741 SELPGAFEA True H1975_Epitope_Rep1 919.4287122928699 919.42816496793 50.154 1 0.1460391383248151 0.0007045974986788797 0.0033128089981252253 ['ENSG00000126247|ENST00000246533|CAPNS1'] 107198 14701 SVIPQIQKV True PC9_epitope_Rep1 1010.6124307416198 1010.61132993586 61.367 2 0.14603653456927515 0.0007045974986788797 0.003313007704038669 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 128478 5725 VPSLQGEKA True PC9_epitope_Rep2 927.5025459394699 927.50144993586 27.41 2 0.14603056880373785 0.0007045974986788797 0.003313463026817009 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 27778 21439 FQAEIAQLM True PC9_epitope_Rep1 1049.52156713189 1049.52046993586 87.304 2 0.14602420135041277 0.0007045974986788797 0.0033139490760834382 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 133960 19707 VYILQPEVI True PC9_epitope_Rep6 1072.6168474157198 1072.61574993586 88.46 2 0.14601139010014347 0.0007045974986788797 0.0033149272169449495 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 38246 6607 HEDVEALAA True H1975_Epitope_Rep3 953.4454249861699 953.44432993586 30.366 2 0.14599535061156632 0.0007045974986788797 0.0033161522388637315 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 90256 7674 REEEVTGPVIA True H1975_Epitope_Rep3 1198.61936659686 1198.61826993586 34.501 2 0.14599522380536228 0.0007045974986788797 0.0033161619255275194 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 45799 8117 ISDAPAPAY True H1975_Epitope_Rep2 903.43379767331 903.43270993586 36.171 2 0.14599173872494395 0.0007045974986788797 0.003316428160122288 ['ENSG00000168476|ENST00000306306|REEP4'] 77681 12642 NTIESLKDV True PC9_epitope_Rep1 1017.5342399905699 1017.53314993586 53.498 2 0.14598755931040408 0.0007045974986788797 0.0033167474647720196 ['ENSG00000180104|ENST00000512944|EXOC3'] 70535 15393 LVYEGQLSQA True PC9_epitope_Rep5 1106.56078909158 1106.5596899358602 64.217 2 0.1459865082325606 0.0007045974986788797 0.003316827771269002 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 39092 7905 HHTTQQTFL True PC9_epitope_Rep3 1111.54105670651 1111.53994993586 35.388 2 0.1459848997969543 0.0007045974986788797 0.0033169506658415064 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 99049 17906 SHFSEEVLL True PC9_epitope_Rep5 1059.52367530687 1059.52256993586 73.893 2 0.1459841264441769 0.0007045974986788797 0.0033170097564574593 ['ENSG00000110628|ENST00000649076|SLC22A18'] 34641 17196 GQAFVIFK True PC9_epitope_Rep5 908.5119884243599 908.51088993586 71.164 2 0.14596985295790357 0.0007045974986788797 0.003318100558010454 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 90329 4915 REFDRRFSP True NCI_RA007_Epitope_Rep5 1208.6050539453997 1208.60341490379 25.601 3 0.14596867574034586 0.0007045974986788797 0.0033181905386838687 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 35020 8045 GQVALRTSL True NCI_RA007_Epitope_Rep4 943.54507945779 943.5439899358599 37.714 2 0.14596813346759036 0.0007045974986788797 0.0033182319881406683 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 111851 18454 TIMPKDIQL True PC9_epitope_Rep3 1057.58416738845 1057.58306993586 76.187 2 0.14596671141940973 0.0007045974986788797 0.003318340687037373 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 105024 14254 SRDLSSQLL True PC9_epitope_Rep3 1017.54547338061 1017.54436993586 59.914 2 0.1459527856176508 0.0007045974986788797 0.0033194053382367907 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 17278 15843 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 66.093 2 0.1459511435208154 0.0007045974986788797 0.0033195309017064224 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 75225 12156 NIDPITM[Oxidation]AY True H1975_Epitope_Rep3 1052.48484765044 1052.4842749679299 51.928 1 0.14595112567785 0.0007045974986788797 0.0033195322661005162 ['ENSG00000116285|ENST00000377482|ERRFI1'] 106986 10533 SVELPIVGK True NCI_RA007_Epitope_Rep4 940.5593325395998 940.55822993586 47.361 2 0.14594799975985287 0.0007045974986788797 0.003319771303584751 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 6892 9117 AQIEGGVHGL True PC9_epitope_Rep4 979.50869394907 979.50758993586 42.655 2 0.14594183107290457 0.0007045974986788797 0.0033202430703838733 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 64767 10037 LQAETSQQL True PC9_epitope_Rep1 1016.51383889916 1016.51274993586 43.475 2 0.1459413938400354 0.0007045974986788797 0.003320276511463567 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 90986 15138 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54470993586 63.488 2 0.14593802647003365 0.0007045974986788797 0.00332053407076812 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 133669 19753 VYAPPVGGF True PC9_epitope_Rep5 905.4647038787698 905.46360993586 81.026 2 0.1459364002507532 0.0007045974986788797 0.003320658462163471 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 118175 12427 TYISWKEEL True NCI_RA007_Epitope_Rep5 1167.58119018299 1167.58008993586 54.457 2 0.14593475828350752 0.0007045974986788797 0.0033207840628383598 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 107489 7889 SVNELIYK True NCI_RA007_Epitope_Rep5 964.5229470308799 964.52184993586 37.038 2 0.14593378253597744 0.0007045974986788797 0.003320858703926093 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461513.1_1_17:49579856-49580498:-|nuORF', 'ENST00000444633.1_1_10:100807788-100807923:+|nuORF'] 93348 10073 RPWSGPSSV True PC9_epitope_Rep5 971.4824792012299 971.48138993586 43.727 2 0.14593302188341806 0.0007045974986788797 0.0033209168921985313 ['ENST00000479540.5_1_20:62204085-62204322:-|nuORF'] 103804 10963 SPVYVGRVV True PC9_epitope_Rep4 974.5549158654999 974.55380993586 49.939 2 0.14593067580861402 0.0007045974986788797 0.003321096368220522 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 111145 20721 THFLQPIYL True PC9_epitope_Rep5 1130.6124307416198 1130.61132993586 84.761 2 0.14593053370185208 0.0007045974986788797 0.0033211072397762095 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 105063 12980 SRDPVQLNL True PC9_epitope_Rep6 1040.56145779792 1040.56036993586 61.502 2 0.14591998379603074 0.0007045974986788797 0.0033219144352099298 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 48672 19410 KAVELLVEL True PC9_epitope_Rep4 1012.6168474157198 1012.61574993586 82.771 2 0.14591966882322494 0.0007045974986788797 0.003321938537438062 ['ENSG00000100554|ENST00000216442|ATP6V1D'] 25351 8868 FEADPPGQV True H1975_Epitope_Rep1 958.4396113297399 958.43850993586 39.024 2 0.14591762082429488 0.0007045974986788797 0.0033220952578656713 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 7262 14816 ARDETEFYL True PC9_epitope_Rep6 1142.5244035828598 1142.5233099358602 68.961 2 0.14591194967837182 0.0007045974986788797 0.003322529273210982 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 114504 10859 TQAEQTLNV True PC9_epitope_Rep2 1002.49818883502 1002.49708993586 47.087 2 0.14591194630734064 0.0007045974986788797 0.0033225295312142703 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 117067 21131 TVIKDLLGL True PC9_epitope_Rep2 970.6062827320198 970.60518993586 86.74 2 0.14591189404145893 0.0007045974986788797 0.003322533531408088 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 99282 7891 SHQTGVVAL True PC9_epitope_Rep4 910.4872302284999 910.48612993586 37.782 2 0.14590933263989936 0.0007045974986788797 0.003322729575346209 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 140697 15919 YRYDSLLL True PC9_epitope_Rep4 1041.54949613189 1041.54838993586 69.159 2 0.1459089961447871 0.0007045974986788797 0.003322755330782848 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-3|NPC1L1'] 85712 10014 QHADPPVQI True PC9_epitope_Rep5 1003.50869394907 1003.50758993586 43.496 2 0.14590362738909798 0.0007045974986788797 0.0033231662837922187 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 2003 5630 AEIRAINEA True H1975_Epitope_Rep3 985.51925863277 985.51816993586 26.693 2 0.14590340078780276 0.0007045974986788797 0.0033231836301672434 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 89633 22542 QYSPLLAAF True PC9_epitope_Rep1 1008.5280324113198 1008.5274749679301 91.51 1 0.14588857953483983 0.0007045974986788797 0.0033243183955622146 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 114083 4594 TPFQGQGHGA True PC9_epitope_Rep3 998.4569927293797 998.45588993586 22.767 2 0.14588735577137624 0.0007045974986788797 0.0033244121082555986 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 87996 12593 QRNPQGFVL True PC9_epitope_Rep2 1057.5668775315298 1057.56578993586 53.749 2 0.14588105118619096 0.0007045974986788797 0.0033248949389657564 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 96316 18199 RYSGVNQSMLF True PC9_epitope_Rep1 1300.6234064314801 1300.6223099358601 74.792 2 0.14588008626839785 0.0007045974986788797 0.0033249688424350768 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'ENST00000519124.5_1_8:124382257-124392860:-|nuORF'] 108606 20277 SYPDNFLHI True PC9_epitope_Rep5 1104.52400966004 1104.52290993586 83.046 2 0.14587859087168306 0.0007045974986788797 0.003325083378739503 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 27828 14269 FQDENHLYL True PC9_epitope_Rep6 1177.54038800017 1177.53928993586 66.777 2 0.14587832783686203 0.0007045974986788797 0.003325103525662747 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 93513 18198 RQLDMELVSV True PC9_epitope_Rep4 1188.61725842188 1188.6161699358602 78.067 2 0.14587377735888732 0.0007045974986788797 0.00332545208477125 ['ENSG00000089902|ENST00000262241|RCOR1'] 24377 22939 FAADIISVL True PC9_epitope_Rep5 947.53278343859 947.53168993586 93.225 2 0.14587264855591894 0.0007045974986788797 0.003325538554838975 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 21693 4423 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 24.155 2 0.1458713276856175 0.0007045974986788797 0.0033256397407419144 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 104228 16220 SQHGVIIQL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 67.528 2 0.1458629418749481 0.0007045974986788797 0.003326282211181356 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 105291 13376 SRMDGEGQLTL True PC9_epitope_Rep2 1205.5710365054497 1205.56992993586 56.732 2 0.14586044684972183 0.0007045974986788797 0.0033264733888389688 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 55683 22490 LALFPGVAL True PC9_epitope_Rep4 899.5480395799099 899.5474949679301 94.739 1 0.14585051415803552 0.0007045974986788797 0.0033272345750987847 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 84819 7902 QEAEPPLTA True H1975_Epitope_Rep3 954.4658260775799 954.46472993586 35.368 2 0.14584616474190887 0.0007045974986788797 0.0033275679446677533 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 74217 7352 NEGVATYAAA True H1975_Epitope_Rep2 965.4454249861698 965.4448749679301 33.22 1 0.14584461632146228 0.0007045974986788797 0.0033276866344173445 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 128789 15765 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 72.881 2 0.14583882926902403 0.0007045974986788797 0.003328130261656932 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 68766 15892 LTLGKLEQV True PC9_epitope_Rep2 999.5964463243098 999.59534993586 66.381 2 0.1458388085601859 0.0007045974986788797 0.003328131849272669 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 65311 12631 LRDAVPATL True PC9_epitope_Rep5 954.5498304850599 954.54872993586 53.588 2 0.14583735720012106 0.0007045974986788797 0.0033282431177512877 ['ENSG00000172922|ENST00000308418|RNASEH2C', 'ENST00000528220.1_1_11:65487749-65488268:-|nuORF'] 129702 9773 VRPPVQVY True PC9_epitope_Rep6 956.5443511817998 956.54324993586 48.034 2 0.14583100060008736 0.0007045974986788797 0.0033287304898769595 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 23099 16832 EVIRELAGI True PC9_epitope_Rep4 998.5760452328998 998.57494993586 72.721 2 0.14583093653687676 0.0007045974986788797 0.0033287354020812864 ['ENSG00000066654|ENST00000396083|THUMPD1'] 53410 15251 KQVSDLISV True PC9_epitope_Rep5 987.5600608155898 987.55896993586 63.672 2 0.1458242974329694 0.0007045974986788797 0.003329244510778094 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 24111 16766 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 69.738 2 0.14582269441794565 0.0007045974986788797 0.003329367446931573 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 118366 14651 TYNPAFSRL True PC9_epitope_Rep1 1067.53999407735 1067.5388899358602 61.177 2 0.14582236220356823 0.0007045974986788797 0.003329392925209634 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 49295 2890 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 15.271 2 0.14580134067758002 0.0007045974986788797 0.0033310055081388987 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 25437 7724 FEDVVNQSSPK True PC9_epitope_Rep4 1248.59863115228 1248.5975299358602 37.097 2 0.14580008340671965 0.0007045974986788797 0.003331101979283022 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 73332 9658 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4684899358601 42.078 2 0.14579970315921514 0.0007045974986788797 0.0033311311564481237 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 104906 17462 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.4909699358602 71.965 2 0.14579596196447422 0.0007045974986788797 0.0033314182394813836 ['ENSG00000113387|ENST00000265073|SUB1'] 142666 20677 YYPNPPLVL True PC9_epitope_Rep4 1074.57498260374 1074.57388993586 87.693 2 0.14578997235227117 0.0007045974986788797 0.0033318779075063925 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 87520 20157 QQHSILLLL True PC9_epitope_Rep4 1063.6389798426299 1063.6378899358601 85.67 2 0.1457897827686473 0.0007045974986788797 0.003331892457980056 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 111030 11664 THDEAINVL True PC9_epitope_Rep4 1010.5032742154599 1010.50216993586 52.627 2 0.14578824071532676 0.0007045974986788797 0.003332010812353472 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 89026 21552 QVLEDFPTI True PC9_epitope_Rep2 1060.54407639828 1060.54357496793 88.369 1 0.14577725704903816 0.0007045974986788797 0.003332853942317523 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 128051 9661 VPKNSDPWAA True PC9_epitope_Rep5 1083.53490869691 1083.53380993586 42.128 2 0.1457750546019129 0.0007045974986788797 0.003333023032440952 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 3906 10142 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47734993586 43.887 2 0.14577304263409957 0.0007045974986788797 0.003333177506205841 ['ENSG00000075618|ENST00000382361|FSCN1'] 6863 11756 AQHDPLLTGV True PC9_epitope_Rep6 1049.55055876105 1049.54946993586 56.38 2 0.14577214363051247 0.0007045974986788797 0.0033332465317119377 ['nc|ENSG00000133136|A0A804HLA8|GNG5B', 'ENSG00000174021|ENST00000370645|GNG5'] 76907 13270 NRDNVGLVL True PC9_epitope_Rep4 998.5508931142199 998.54978993586 58.94 2 0.14576160139175862 0.0007045974986788797 0.003334056070952576 ['ENSG00000013523|ENST00000251089|ANGEL1'] 97701 7406 SEIDMSVKA True H1975_Epitope_Rep3 978.46919720586 978.46808993586 33.465 2 0.14576148988635787 0.0007045974986788797 0.003334064634504301 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 35251 7670 GRDENSVEL True PC9_epitope_Rep1 1017.4727023631699 1017.47160993586 34.324 2 0.14576123406989372 0.0007045974986788797 0.0033340842811467202 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 2479 4039 AEQLRM[Oxidation]EET True H1975_Epitope_Rep2 1121.5022886197298 1121.50118993586 20.613 2 0.14576070138547187 0.0007045974986788797 0.003334125191550418 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 34972 10872 GQSELASRLTL True NCI_RA007_Epitope_Rep4 1173.6353510141698 1173.63424993586 48.668 2 0.14575976629023665 0.0007045974986788797 0.0033341970084926576 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 140318 13431 YRDGTGVVEF True PC9_epitope_Rep4 1141.5403880001697 1141.53928993586 59.562 2 0.14575789501609565 0.0007045974986788797 0.003334340730222056 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 6626 18092 APWKPTWPA True PC9_epitope_Rep5 1052.5443511817998 1052.54324993586 74.603 2 0.14574873401650126 0.0007045974986788797 0.0033350444224116167 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23', 'PRSS23|p.A166Qfs*19|1|0.13|ENSG00000150687|chr11:86808138-86808138|G/-|frameshift_variant'] 106293 10732 STFNVFVGK True NCI_RA007_Epitope_Rep4 997.5232813840498 997.52218993586 48.127 2 0.14574480486671607 0.0007045974986788797 0.003335346280995121 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 107105 9289 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 45.893 2 0.14574456826010096 0.0007045974986788797 0.0033353644592646046 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 9033 10473 AVHDSFVAV True PC9_epitope_Rep6 943.4763311916299 943.4752299358599 51.043 2 0.14573380234457792 0.0007045974986788797 0.0033361916988780453 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 85719 14061 QHAEPWVV True PC9_epitope_Rep5 964.4766655447999 964.47556993586 59.099 2 0.14573139496231394 0.0007045974986788797 0.003336376707045832 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 1568 6569 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43364496793 30.178 1 0.14572843929526083 0.0007045974986788797 0.0033366038650365455 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 9975 21395 AYPEYLITY True PC9_epitope_Rep5 1131.54882742555 1131.5477299358602 87.357 2 0.14572602202728754 0.0007045974986788797 0.0033367896557564684 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 91346 13391 RGVDLDQLLD True NCI_RA007_Epitope_Rep4 1142.59315184902 1142.5920499358601 58.681 2 0.14572384532303242 0.0007045974986788797 0.003336956965596763 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000586686.6_1_19:1438424-1438889:+|nuORF', 'ENST00000591032.1_1_19:1438424-1439963:+|nuORF'] 25744 10722 FESVSHLI True H1975_Epitope_Rep1 930.4810822188999 930.47998993586 46.204 2 0.1457115665892656 0.0007045974986788797 0.0033379009123728006 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 99162 14340 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 60.16 2 0.14570788802807366 0.0007045974986788797 0.003338183759152882 ['ENSG00000132646|ENST00000379143|PCNA'] 108832 20635 SYVRSLPFF True PC9_epitope_Rep2 1114.5811306133398 1114.58002993586 84.807 2 0.14569959784937703 0.0007045974986788797 0.0033388212833141266 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 7082 10451 AQSESILKV True PC9_epitope_Rep4 973.54441075145 973.54330993586 47.91 2 0.14568948909327506 0.0007045974986788797 0.003339598821888241 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 68389 7966 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 35.613 2 0.14568863989864497 0.0007045974986788797 0.0033396641478692143 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 87825 7418 QRFADTHSL True PC9_epitope_Rep5 1073.52540664237 1073.5243099358602 33.489 2 0.1456839763158797 0.0007045974986788797 0.003340022925861947 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 57752 4325 LEEPEEPK True H1975_Epitope_Rep3 969.46549172441 969.46438993586 21.754 2 0.14567877938439008 0.0007045974986788797 0.0033404227804825883 ['nc|ENSG00000104131|O75822-3|EIF3J', 'ENSG00000104131|ENST00000261868|EIF3J', 'nc|ENSG00000104131|O75822-2|EIF3J'] 97090 5127 SDGVAVLK True H1975_Epitope_Rep1 787.44396843419 787.44286993586 24.79 2 0.14567846590776054 0.0007045974986788797 0.003340446901059443 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 7020 7696 AQNPSLFVK True NCI_RA007_Epitope_Rep4 1002.5498304850599 1002.54872993586 36.267 2 0.14567644830296397 0.0007045974986788797 0.0033406021505599883 ['nc|ENSG00000117410|Q99437-2|ATP6V0B', 'ENSG00000117410|ENST00000472174|ATP6V0B'] 99400 16428 SHVIQDIAL True PC9_epitope_Rep1 994.5447451046199 994.54364993586 68.013 2 0.14567490789930015 0.0007045974986788797 0.0033407206854881772 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 118455 14633 TYPIKTPTF True PC9_epitope_Rep6 1066.5698972233001 1066.5688099358601 68.203 2 0.14567404270649179 0.0007045974986788797 0.003340787264394668 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 77104 16306 NRLTFASTL True PC9_epitope_Rep5 1021.55564414149 1021.55454993586 67.717 2 0.14567306355849502 0.0007045974986788797 0.003340862614049227 ['ENSG00000047315|ENST00000314595|POLR2B'] 108664 20396 SYQKVIELF True PC9_epitope_Rep1 1125.6070110080097 1125.6059099358602 83.269 2 0.14567131599561978 0.0007045974986788797 0.0033409971007350714 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 21276 20805 ERDTYMLLL True PC9_epitope_Rep2 1152.58489566444 1152.58378993586 85.468 2 0.14566322687164635 0.0007045974986788797 0.0033416196831857685 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 9618 21400 AYANIISQF True PC9_epitope_Rep1 1025.5181960036098 1025.51767496793 87.149 1 0.14566092334373812 0.0007045974986788797 0.0033417969961646306 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 138372 12096 YHGDSDLQL True PC9_epitope_Rep1 1046.4668887067398 1046.4657899358601 51.387 2 0.14565768934607112 0.0007045974986788797 0.0033420459473959985 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 84198 21696 PYLDKFFTL True PC9_epitope_Rep2 1142.6011973515801 1142.60010993586 88.931 2 0.1456542814843656 0.0007045974986788797 0.0033423083025240297 ['ENSG00000130158|ENST00000294618|DOCK6'] 96320 21766 RYSIAFPLL True PC9_epitope_Rep5 1078.61751612206 1078.61640993586 88.752 2 0.14565382022291026 0.0007045974986788797 0.0033423438144310064 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 95725 9991 RYGLVTNEI True NCI_RA007_Epitope_Rep4 1063.56620882519 1063.5651099358602 45.275 2 0.14565296323242985 0.0007045974986788797 0.0033424097939857697 ['ENSG00000115267|ENST00000649979|IFIH1'] 89421 13826 QYASRFVQL True PC9_epitope_Rep6 1110.5821932425 1110.58108993586 64.988 2 0.14565075622402665 0.0007045974986788797 0.0033425797171558295 ['ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-2|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 104194 20778 SQFQQEFPSL True PC9_epitope_Rep2 1209.5666027480097 1209.56550993586 85.364 2 0.1456496840898937 0.0007045974986788797 0.003342662266578246 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 59018 14932 LEVNLQAMK True PC9_epitope_Rep3 1044.5637662970398 1044.5626699358602 62.571 2 0.1456444845181322 0.0007045974986788797 0.003343062638554102 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 6254 10147 APQVLVLAPTR True H1975_Epitope_Rep1 1163.70264272835 1163.7015499358602 43.969 2 0.14564206804260266 0.0007045974986788797 0.0033432487256925218 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 38278 11044 HEENPAWLP True H1975_Epitope_Rep2 1091.50360856863 1091.5025099358602 47.51 2 0.14563974823313713 0.0007045974986788797 0.003343427378488428 ['nc|ENSG00000114993|Q9BST9-2|RTKN', 'ENSG00000114993|ENST00000272430|RTKN', 'nc|ENSG00000114993|Q9BST9-3|RTKN'] 26210 11034 FHDLEGNAV True PC9_epitope_Rep5 1000.4614094034799 1000.46030993586 47.432 2 0.1456372684269591 0.0007045974986788797 0.003343618363417967 ['ENSG00000099219|ENST00000339450|ERMP1'] 54507 15482 KYIEGVSDF True PC9_epitope_Rep1 1056.51277627 1056.51166993586 64.372 2 0.14563605126134943 0.0007045974986788797 0.0033437121086984257 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 107754 4725 SVSPVVHVR True NCI_RA007_Epitope_Rep4 978.5610638750999 978.55996993586 24.605 2 0.14563571147684626 0.0007045974986788797 0.0033437382791398048 ['nc|ENSG00000143889|Q8WVV9-3|HNRNPLL', 'nc|ENSG00000143889|Q8WVV9-2|HNRNPLL', 'nc|ENSG00000143889|Q8WVV9-5|HNRNPLL', 'nc|ENSG00000143889|Q8WVV9-4|HNRNPLL', 'ENSG00000143889|ENST00000449105|HNRNPLL'] 103529 14820 SPRPPLISV True PC9_epitope_Rep5 964.57056592964 964.56946993586 62.005 2 0.14563438918414479 0.0007045974986788797 0.0033438401249911574 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 75110 11549 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56036993586 52.185 2 0.14563134606882028 0.0007045974986788797 0.0033440745240451634 ['ENSG00000171223|ENST00000302754|JUNB'] 118181 14801 TYITSVSRL True PC9_epitope_Rep1 1038.57095985246 1038.5698699358602 61.752 2 0.14563039028204214 0.0007045974986788797 0.0033441481478641536 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 96184 10775 RYPDSHQLF True PC9_epitope_Rep2 1161.55670677065 1161.5550749037902 46.764 3 0.14562953598192255 0.0007045974986788797 0.0033442139555756693 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 6396 5100 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 27.294 2 0.14561264749513472 0.0007045974986788797 0.0033455151592022073 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 116927 16904 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep5 1178.5641606002998 1178.56306993586 70.035 2 0.14560671461022823 0.0007045974986788797 0.003345972388337457 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 76851 17553 NRDELELEL True PC9_epitope_Rep4 1129.5615173675699 1129.5604299358602 75.536 2 0.1456060986932841 0.0007045974986788797 0.0033460198587143197 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 108671 19336 SYQKVIELF True PC9_epitope_Rep4 1125.6070110080097 1125.6059099358602 82.483 2 0.14560564661015682 0.0007045974986788797 0.003346054702403852 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 103997 15596 SQDARFYAL True PC9_epitope_Rep1 1069.51925863277 1069.5181699358602 64.81 2 0.14560160362581054 0.0007045974986788797 0.0033463663259335253 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 120113 4937 VEAAAELSAK True H1975_Epitope_Rep3 987.5236753068699 987.52256993586 24.118 2 0.1455914059292103 0.0007045974986788797 0.00334715246804749 ['ENSG00000159335|ENST00000309083|PTMS'] 24559 17250 FAGMPITL True H1975_Epitope_Rep2 848.44661128648 848.44606496793 71.643 1 0.1455885784325876 0.0007045974986788797 0.0033473704727284954 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 132030 8770 VTSTFIIEK True NCI_RA007_Epitope_Rep4 1036.5804619069997 1036.57936993586 40.536 2 0.1455880387004941 0.0007045974986788797 0.0033474120885723696 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 41105 12833 HTVEDLVKV True PC9_epitope_Rep1 1038.5709598524597 1038.5698699358602 54.237 2 0.14558690798124135 0.0007045974986788797 0.003347499273930067 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 96250 13255 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.60254993586 58.885 2 0.14558108381032772 0.0007045974986788797 0.003347948388817424 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 17487 5759 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 27.546 3 0.14557945113435813 0.0007045974986788797 0.0033480742988711096 ['ENSG00000162378|ENST00000294353|ZYG11B'] 62004 20659 LLDPSVFHV True PC9_epitope_Rep1 1025.5545815123298 1025.5534899358602 84.286 2 0.1455735820371424 0.0007045974986788797 0.0033485269556239473 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 105899 7262 SSQSLSFPK True NCI_RA007_Epitope_Rep4 979.49746055903 979.49636993586 34.57 2 0.14557322054051255 0.0007045974986788797 0.0033485548382019273 ['ENSG00000110756|ENST00000349215|HPS5', 'nc|ENSG00000110756|Q9UPZ3-2|HPS5'] 108752 20328 SYSHIMALI True PC9_epitope_Rep3 1033.52665251233 1033.52554993586 83.441 2 0.1455721210508012 0.0007045974986788797 0.003348639644304541 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 40318 13125 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 55.353 2 0.14556879497405611 0.0007045974986788797 0.0033488962050452725 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 90150 7249 REDENLQVP True H1975_Epitope_Rep1 1098.53055159246 1098.5294499358602 32.893 2 0.1455668966003933 0.0007045974986788797 0.0033490426470298654 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF', 'MTMR3|p.C235Qfs*20|1|0.17|ENSG00000100330|chr22:30007143-30007152|GCTGTGGACA/-|frameshift_variant'] 20739 9783 EQEVNILK True PC9_epitope_Rep1 971.5287606873098 971.52766993586 42.492 2 0.14556422587521045 0.0007045974986788797 0.003349248679571659 ['ENSG00000100345|ENST00000216181|MYH9'] 42837 6475 IEQETPVSA True H1975_Epitope_Rep3 972.4763907612798 972.47528993586 29.875 2 0.14556416409471878 0.0007045974986788797 0.0033492534457639786 ['ENST00000395449.7_1_11:47187835-47198404:-|nuORF', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 15255 12602 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 53.57 2 0.14556023265457738 0.0007045974986788797 0.003349556759249853 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 106826 14356 SVAQDIPKL True PC9_epitope_Rep4 969.5494961318899 969.54838993586 63.128 2 0.1455563060012603 0.0007045974986788797 0.003349859730678226 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 59829 11528 LGEYGFQNA True NCI_RA007_Epitope_Rep1 997.4505103666099 997.4499649679301 48.809 1 0.14555295819523775 0.0007045974986788797 0.003350118061105746 ['CON__P02769'] 66596 10510 LSISETYDLK True NCI_RA007_Epitope_Rep5 1167.6023195503901 1167.6012299358601 47.059 2 0.1455398975164565 0.0007045974986788797 0.003351126065887504 ['CON__P34955'] 111492 16962 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62789490379 70.492 3 0.14553959554411966 0.0007045974986788797 0.003351149375251684 ['ENSG00000076003|ENST00000264156|MCM6'] 142531 10206 YYITTRAQF True NCI_RA007_Epitope_Rep4 1161.58185888933 1161.5807699358602 46.112 2 0.14553422288113546 0.0007045974986788797 0.003351564120171324 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 118484 14781 TYPQLEGFKF True NCI_RA007_Epitope_Rep5 1228.6128246644396 1228.61172993586 63.528 2 0.14553040054787952 0.0007045974986788797 0.003351859217808612 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 104048 3759 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 20.603 2 0.1455247434761683 0.0007045974986788797 0.003352296011129445 ['ENSG00000130935|ENST00000253247|NOL11'] 99530 13917 SIDSLQLGY True H1975_Epitope_Rep3 994.49712620586 994.4965749679301 58.846 1 0.14551401299525343 0.0007045974986788797 0.003353124687495033 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 98272 14421 SEVGDTQVVVF True H1975_Epitope_Rep2 1178.58191845898 1178.58082993586 60.622 2 0.14551333968104666 0.0007045974986788797 0.0033531766919117838 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 106309 3942 STFRESFKK True NCI_RA007_Epitope_Rep2 1128.5927579262 1128.59110490379 19.969 3 0.14551316729269867 0.0007045974986788797 0.003353190006709211 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 122063 22395 VFYPYPQYF True PC9_epitope_Rep1 1222.5698972232997 1222.56937496793 90.96 1 0.14551017839111116 0.0007045974986788797 0.0033534208695236672 ['ENSG00000103160|ENST00000219439|HSDL1'] 2620 5328 AERYDDMAA True NCI_RA007_Epitope_Rep4 1040.4233096425999 1040.42220993586 27.059 2 0.1455014735768536 0.0007045974986788797 0.0033540933195377576 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 103002 14062 SPFHFQPSA True PC9_epitope_Rep3 1016.47158016436 1016.47048993586 59.179 2 0.14549384185170514 0.0007045974986788797 0.003354682983281524 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19968469-19969442:+|nuORF'] 105591 10352 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 44.827 2 0.14549253230471768 0.0007045974986788797 0.0033547841755274224 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 85038 12717 QEIATVVVP True H1975_Epitope_Rep3 954.5385970950199 954.53750993586 54.126 2 0.14548291745081912 0.0007045974986788797 0.00335552723425951 ['ENSG00000139233|ENST00000266604|LLPH'] 1778 8157 AEHAGFAVP True H1975_Epitope_Rep2 897.4344663796498 897.43336993586 36.327 2 0.14548035855689667 0.0007045974986788797 0.0033557250192122073 ['ENST00000528717.1_1_11:102323683-102332276:+|nuORF'] 45145 16966 IPNPAQTSVVV True PC9_epitope_Rep4 1123.62372370131 1123.62262993586 73.25 2 0.14546875923106578 0.0007045974986788797 0.0033566217128560825 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 141306 5001 YTDSEPRATY True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 24.322 2 0.1454651356724396 0.0007045974986788797 0.0033569018832902593 ['ENSG00000158480|ENST00000289431|SPATA2'] 97492 7180 SEELQSVQA True H1975_Epitope_Rep2 989.4665543535699 989.46544993586 32.552 2 0.1454628582229431 0.0007045974986788797 0.003357077985618638 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF', 'ENST00000486527.6_1_2:25016788-25037388:+|nuORF', 'ENST00000498362.1_1_2:25016366-25039516:+|nuORF'] 54193 12894 KVVDVDVKL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 54.47 2 0.14545803356895137 0.0007045974986788797 0.0033574510792350096 ['ENSG00000101350|ENST00000375712|KIF3B'] 89493 18463 QYIEELQKF True PC9_epitope_Rep5 1196.6077392839995 1196.60664993586 76.039 2 0.14545296782843015 0.0007045974986788797 0.0033578428605759076 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'RALGPS2|p.D401Mfs*5|1|0.09|ENSG00000116191|chr1:178889650-178889650|G/-|frameshift_variant', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 103085 22249 SPGTALILLEA True PC9_epitope_Rep1 1083.61757569171 1083.61646993586 90.398 2 0.14544120396331778 0.0007045974986788797 0.0033587528461330733 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 17681 14902 EHLQVITTL True PC9_epitope_Rep6 1052.5866099166 1052.58550993586 69.312 2 0.14543848945442353 0.0007045974986788797 0.00335896285986774 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 42643 3554 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 18.633 2 0.14543548752858768 0.0007045974986788797 0.0033591951254191483 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 24329 10750 EYVKQTWNL True NCI_RA007_Epitope_Rep5 1179.59242357303 1179.5913299358601 47.987 2 0.14543453587589078 0.0007045974986788797 0.0033592687601964647 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 97560 7006 SEESPQVVEA True H1975_Epitope_Rep2 1073.48768372097 1073.4865899358601 31.872 2 0.14543375612428794 0.0007045974986788797 0.0033593290952048456 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 104790 19819 SQYGEIVNI True PC9_epitope_Rep3 1021.5080252427299 1021.50692993586 81.466 2 0.14542362363649528 0.0007045974986788797 0.003360113216830976 ['ENSG00000134597|ENST00000305536|RBMX2'] 73325 9210 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 40.419 2 0.14542089022092688 0.0007045974986788797 0.0033603247784864325 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 82428 16338 PPPLPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 75.215 2 0.14541340128670616 0.0007045974986788797 0.003360904476911465 ['nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP', 'ENST00000606070.1_1_6:108279003-108279531:+|nuORF'] 118136 21867 TYIPGTQITF True PC9_epitope_Rep1 1139.58627556343 1139.5851699358602 88.923 2 0.14540693586358125 0.0007045974986788797 0.003361405028008539 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 1144 5633 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 26.667 2 0.14540256111012925 0.0007045974986788797 0.003361743762116645 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 28506 14414 FSEDGEYFAY True H1975_Epitope_Rep2 1226.4767846840998 1226.4762749679298 60.595 1 0.1453988517112317 0.0007045974986788797 0.0033620310048612066 ['ENSG00000085377|ENST00000652536|PREP'] 92177 8733 RLFVGSIPK True NCI_RA007_Epitope_Rep2 1015.6178504752298 1015.61674993586 38.615 2 0.14539829451491385 0.0007045974986788797 0.0033620741542823565 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 35905 10668 GTQPWFISK True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 49.01 2 0.1453960883141512 0.0007045974986788797 0.0033622450084205492 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK'] 30463 11427 GAFVHFHGV True PC9_epitope_Rep2 969.4820852784097 969.48098993586 49.274 2 0.14539156958498442 0.0007045974986788797 0.0033625949779314615 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 9771 9553 AYINRASLL True NCI_RA007_Epitope_Rep3 1019.57637958607 1019.57528993586 44.662 2 0.1453757039038721 0.0007045974986788797 0.0033638240403572025 ['COPS4|p.P331Lfs*8|1|0.35|ENSG00000138663|chr4:83066541-83066541|C/-|frameshift_variant', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENSG00000138663|ENST00000264389|COPS4'] 40764 18224 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.5589899358602 75.111 2 0.14537290393364724 0.0007045974986788797 0.0033640409912333758 ['ENSG00000169813|ENST00000682386|HNRNPF'] 98383 5688 SEYWDRETRSA True H1975_Epitope_Rep2 1398.61640647474 1398.61477490379 26.877 3 0.14537083969157308 0.0007045974986788797 0.0033642009443838124 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 26262 8539 FHEPSQEL True PC9_epitope_Rep4 985.4505103666098 985.44940993586 40.324 2 0.14536668473741626 0.0007045974986788797 0.0033645229246990404 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 130057 10332 VSDAVATYY True H1975_Epitope_Rep2 987.4549270407101 987.4543749679301 44.751 1 0.14536470365705745 0.0007045974986788797 0.0033646764555565613 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF'] 92377 16384 RLPETLPSL True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 75.408 2 0.1453578801184049 0.0007045974986788797 0.0033652053232061034 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 96191 12182 RYPDSHQLF True PC9_epitope_Rep5 1161.55670677065 1161.55560993586 51.847 2 0.1453541189837856 0.0007045974986788797 0.0033654968703787694 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 21384 12461 ERIGETPEL True PC9_epitope_Rep1 1042.5294889632999 1042.52838993586 52.797 2 0.14535163459333933 0.0007045974986788797 0.0033656894635344173 ['ENSG00000168806|ENST00000305641|LCMT2'] 114411 8876 TPTLVEVSR True PC9_epitope_Rep6 1000.55530978832 1000.55420993586 44.08 2 0.14534438901086086 0.0007045974986788797 0.0033662512129964623 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 7239 20128 ARDEIIWLL True PC9_epitope_Rep6 1127.63389446219 1127.63278993586 90.095 2 0.145343124312227 0.0007045974986788797 0.0033663492745363427 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 90905 4676 REYDTSKIEA True NCI_RA007_Epitope_Rep4 1210.5829810881398 1210.58188993586 24.408 2 0.1453422747334564 0.0007045974986788797 0.003366415150323809 ['ENSG00000115364|ENST00000393909|MRPL19'] 106908 3200 SVDPKNYPK True NCI_RA007_Epitope_Rep2 1046.53965972418 1046.53856993586 17.093 2 0.1453410244713379 0.0007045974986788797 0.0033665120971682785 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 65126 9554 LQNEPLPERL True NCI_RA007_Epitope_Rep4 1207.6560864587498 1207.6549899358602 43.597 2 0.1453388590986293 0.0007045974986788797 0.0033666800093639865 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 54352 8179 KYEELQIT True H1975_Epitope_Rep2 1022.5284263341399 1022.5273299358599 36.411 2 0.1453387718652825 0.0007045974986788797 0.003366686773982551 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 35006 5619 GQTGVIRSV True PC9_epitope_Rep6 915.5137793295099 915.51268993586 29.689 2 0.14533452754318513 0.0007045974986788797 0.0033670159215442247 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 115572 8510 TRSTFSTNY True PC9_epitope_Rep1 1075.49343780775 1075.4923499358601 37.571 2 0.14533188300163263 0.0007045974986788797 0.0033672210221497726 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 58905 11664 LETEVPVVA True H1975_Epitope_Rep2 955.5226126777098 955.5220649679301 49.937 1 0.14533113964137256 0.0007045974986788797 0.003367278676585539 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 74542 5843 NFSDNQLQEGK True H1975_Epitope_Rep3 1278.5840437173 1278.5829499358601 27.49 2 0.1453290567615427 0.0007045974986788797 0.003367440228328506 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 106137 10796 STDLQDYTY True H1975_Epitope_Rep1 1104.46113461996 1104.46057496793 46.49 1 0.14532135813130836 0.0007045974986788797 0.0033680374141830164 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 61405 11146 LITPAVVSER True PC9_epitope_Rep6 1083.62880908175 1083.6277099358601 53.824 2 0.14532064482753898 0.0007045974986788797 0.0033680927507712586 ['ENSG00000118181|ENST00000527673|RPS25'] 104296 19028 SQIISLQTL True PC9_epitope_Rep6 1001.5757108797301 1001.5746099358599 85.833 2 0.14532029337876354 0.0007045974986788797 0.0033681200157514735 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 109150 21695 TAMDVVYAL True PC9_epitope_Rep1 981.4841189940099 981.48302993586 88.28 2 0.1453163951232627 0.0007045974986788797 0.003368422452510363 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 126476 19029 VLLGKVYVV True PC9_epitope_Rep5 988.63210355704 988.63100993586 78.223 2 0.1453161643853696 0.0007045974986788797 0.003368440354599685 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 115172 7705 TRDPQFQKL True PC9_epitope_Rep1 1131.6036569630699 1131.60254993586 34.457 2 0.14531368388749483 0.0007045974986788797 0.00336863281311528 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 96631 7102 SAIDTREEL True NCI_RA007_Epitope_Rep4 1032.50875351872 1032.5076499358602 33.938 2 0.14531235561741396 0.0007045974986788797 0.003368735876308332 ['nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170'] 54402 20688 KYFGGVLEYF True PC9_epitope_Rep4 1221.6070110080097 1221.6059099358602 87.737 2 0.14530727709328278 0.0007045974986788797 0.003369129958279762 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 117178 20228 TVLEQVLPI True PC9_epitope_Rep6 1010.6011973515798 1010.60010993586 90.49 2 0.145306996353468 0.0007045974986788797 0.0033691517443897793 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 8652 19640 AVAELNYGL True PC9_epitope_Rep2 948.4916469026 948.49054993586 80.93 2 0.14530540032209707 0.0007045974986788797 0.0033692756030662113 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 97268 11779 SEAFATVVTA True H1975_Epitope_Rep2 994.4971262058599 994.49602993586 50.382 2 0.14529212440356912 0.0007045974986788797 0.0033703060449633573 ['nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 134456 11504 VYPPPHQVF True PC9_epitope_Rep4 1082.5549158654999 1082.55380993586 52.012 2 0.14529055084224618 0.0007045974986788797 0.0033704282014140837 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 128730 7087 VPYEIQKGQA True PC9_epitope_Rep4 1131.59242357303 1131.5913299358601 34.528 2 0.14528749853013587 0.0007045974986788797 0.0033706651666649237 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 139420 21298 YLPELLQTV True PC9_epitope_Rep4 1074.5961119711399 1074.5950099358602 90.09 2 0.1452850444095862 0.0007045974986788797 0.0033708557035165994 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 74963 12485 NHNIYITEV True PC9_epitope_Rep4 1101.54547338061 1101.54436993586 55.83 2 0.14526927283097912 0.0007045974986788797 0.003372080457455147 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 99368 14664 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep2 1277.7343370957499 1277.7332299358602 61.672 2 0.145268214604546 0.0007045974986788797 0.003372162650662813 ['ENSG00000100632|ENST00000557016|ERH'] 61105 18910 LIIDENGVHEL True PC9_epitope_Rep2 1250.65066672514 1250.6495699358602 78.1 2 0.14526788383014225 0.0007045974986788797 0.0033721883425568916 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 18436 20884 EIYKEFFEV True PC9_epitope_Rep1 1202.58594121026 1202.5848499358601 85.15 2 0.14526488134631735 0.0007045974986788797 0.003372421560236915 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 48943 6748 KEEEPSVKLP True H1975_Epitope_Rep2 1154.6183039676998 1154.61664490379 30.871 3 0.14526322883348472 0.0007045974986788797 0.0033725499258711405 ['ENSG00000254505|ENST00000347519|CHMP4A', 'nc|ENSG00000254505|Q9BY43-2|CHMP4A'] 62593 17579 LLLAAARLAAA True PC9_epitope_Rep4 1052.67061432408 1052.66950993586 75.636 2 0.14526107499468507 0.0007045974986788797 0.003372717241320586 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 53810 12851 KTDVTMLLY True H1975_Epitope_Rep2 1082.56818297114 1082.5670899358602 54.541 2 0.14525976574820318 0.0007045974986788797 0.0033728189508103554 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL', 'ENST00000514335.1_1_5:37051847-37064632:+|nuORF'] 3524 10091 AGLQFPVGR True NCI_RA007_Epitope_Rep5 943.5239500903898 943.52284993586 45.451 2 0.14525763911724263 0.0007045974986788797 0.0033729841657321067 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 111037 9274 THDEAVQVL True PC9_epitope_Rep4 1010.5032742154598 1010.50216993586 43.276 2 0.14524790517668193 0.0007045974986788797 0.003373740484322697 ['ENSG00000101400|ENST00000217381|SNTA1', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 109806 18600 TEEDVLNIFP True H1975_Epitope_Rep2 1175.5710194221099 1175.56992993586 77.192 2 0.1452477924872171 0.0007045974986788797 0.0033737492411813493 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000574210.5_1_17:2597327-2598221:-|nuORF'] 27436 24344 FLYPFPLAL True PC9_epitope_Rep3 1079.60555445603 1079.6044499358602 98.952 2 0.14524717318833144 0.0007045974986788797 0.003373797365983811 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 141407 16322 YTELEAIMY True H1975_Epitope_Rep2 1131.5158130451098 1131.51470993586 68.0 2 0.1452468511862067 0.0007045974986788797 0.0033738223885632743 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 71227 19553 LYPEVFEKF True PC9_epitope_Rep4 1170.5961119711399 1170.5950099358602 83.332 2 0.14524412741942896 0.0007045974986788797 0.0033740340581177985 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 113742 7818 TMDNPTTTQY True H1975_Epitope_Rep2 1170.48630382198 1170.4852099358602 35.019 2 0.14524384001869414 0.0007045974986788797 0.0033740563933934756 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 108500 20664 SYMGHFDLL True PC9_epitope_Rep3 1081.49026700361 1081.48967496793 84.757 1 0.14524194102732402 0.0007045974986788797 0.0033742039767218727 ['ENSG00000169976|ENST00000367569|SF3B5'] 107908 14095 SVVSDILFK True NCI_RA007_Epitope_Rep4 1006.5698972233 1006.56880993586 61.497 2 0.1452418004153394 0.0007045974986788797 0.003374214904875316 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 5197 14857 ALNDKFASL True PC9_epitope_Rep2 977.51819600361 977.51708993586 62.411 2 0.14523398606434063 0.0007045974986788797 0.003374822279855755 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'CON__Q0VBK2'] 106899 10972 SVDPHGFISY True H1975_Epitope_Rep1 1120.5189242796 1120.5178299358602 47.168 2 0.1452336865726414 0.0007045974986788797 0.003374845560183965 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant'] 8615 18735 ATYVFLHTV True PC9_epitope_Rep1 1049.5545815123298 1049.5534899358602 76.854 2 0.1452271194425839 0.0007045974986788797 0.0033753560817042522 ['ENSG00000123353|ENST00000243045|ORMDL2'] 77862 17724 NVFDEAVRV True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 73.457 2 0.14522488917557697 0.0007045974986788797 0.0033755294776820666 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000475867.5_1_10:5963439-5965826:+|nuORF'] 52846 10663 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54290993586 48.763 2 0.1452140809754082 0.0007045974986788797 0.0033763699053484856 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 104911 16904 SRDDNMFQI True PC9_epitope_Rep2 1124.49205790876 1124.4909699358602 70.265 2 0.1452077038615227 0.0007045974986788797 0.0033768658766460623 ['ENSG00000113387|ENST00000265073|SUB1'] 111254 20566 THLEGVLLL True PC9_epitope_Rep3 993.5858816406098 993.58478993586 84.373 2 0.14519378919622802 0.0007045974986788797 0.003377948322012624 ['ENSG00000204839|ENST00000398882|MROH6'] 111499 16223 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62789490379 70.344 3 0.14519363358771029 0.0007045974986788797 0.0033779604290118184 ['ENSG00000076003|ENST00000264156|MCM6'] 128075 10087 VPLAIVNKA True PC9_epitope_Rep6 923.58040233735 923.57930993586 49.402 2 0.14518785778274515 0.0007045974986788797 0.003378409841510414 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 95628 15673 RYALQMEQL True PC9_epitope_Rep4 1150.5804789903398 1150.57938993586 68.213 2 0.1451843755667163 0.0007045974986788797 0.003378680819706954 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 108422 22888 SYLPFTEAF True PC9_epitope_Rep1 1073.5069626135698 1073.5058699358601 92.834 2 0.14518426836015716 0.0007045974986788797 0.0033786891626222436 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 105397 19343 SRSETFLLL True PC9_epitope_Rep4 1064.5866099165999 1064.58550993586 82.512 2 0.14518186627841226 0.0007045974986788797 0.003378876100251347 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A'] 132377 16844 VVAEELENV True PC9_epitope_Rep5 1000.50769088956 1000.50658993586 69.8 2 0.1451699716937154 0.0007045974986788797 0.003379801926062595 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.I97V|1|0.22|ENSG00000167196|chr15:75913212-75913212|A/G|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 17408 14212 EHDPSSIYL True PC9_epitope_Rep3 1059.48728979815 1059.48618993586 59.753 2 0.14516699298744298 0.0007045974986788797 0.0033800338158368813 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'HEATR5B|p.G877Wfs*15|1|0.44|ENSG00000008869|chr2:37049720-37049721|-/A|frameshift_variant', 'HEATR5B|p.R763C|1|0.1|ENSG00000008869|chr2:37056552-37056552|G/A|missense_variant', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 82948 4355 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.6305699358602 21.868 2 0.14516623418703198 0.0007045974986788797 0.0033800928903362777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 28265 13769 FRMTDQEAI True PC9_epitope_Rep1 1109.5175443806097 1109.51644993586 57.808 2 0.14516073359244536 0.0007045974986788797 0.0033805211559821058 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 72040 18560 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 77.016 2 0.1451600044718551 0.0007045974986788797 0.0033805779279467937 ['ENSG00000198712|ENST00000361739|MT-CO2'] 44040 17081 IIIPEIQKV True PC9_epitope_Rep6 1051.66413196131 1051.66302993586 78.27 2 0.14515811680262977 0.0007045974986788797 0.0033807249130973853 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 48215 15192 IYPVKYTQTF True PC9_epitope_Rep4 1258.65977485686 1258.6586699358602 66.359 2 0.14515263600456937 0.0007045974986788797 0.003381151716611867 ['ENSG00000112378|ENST00000421351|PERP'] 88252 7216 QSDPTQSGMY True H1975_Epitope_Rep3 1112.44443901 1112.44387496793 32.728 1 0.14514892946977564 0.0007045974986788797 0.003381440384135284 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 4138 12763 AHSVQPLSL True PC9_epitope_Rep5 950.51853035678 950.51742993586 54.1 2 0.14514879553175947 0.0007045974986788797 0.0033814508157801433 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 21701 19220 ERSNDYFVL True PC9_epitope_Rep3 1141.54038800017 1141.53928993586 79.15 2 0.14514815241256174 0.0007045974986788797 0.003381500904999916 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 31861 7832 GELERALSA True H1975_Epitope_Rep2 944.4927095317598 944.49160993586 35.075 2 0.14513242771035656 0.0007045974986788797 0.0033827258499420964 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'GOLGA2|p.R293Tfs*17|1|0.13|ENSG00000167110|chr9:128263064-128263067|TCTC/-|frameshift_variant', 'ENSG00000186399|ENST00000327271|GOLGA8R', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'ENSG00000261739|ENST00000562295|GOLGA8S', 'ENSG00000178115|ENST00000562783|GOLGA8Q'] 111055 14372 THDGSILIV True PC9_epitope_Rep4 953.51819600361 953.51708993586 63.19 2 0.14513076412723053 0.0007045974986788797 0.0033828554678653165 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 86872 16489 QLREAFEQL True PC9_epitope_Rep5 1132.5876725457597 1132.58656993586 68.424 2 0.14512882850758968 0.0007045974986788797 0.0033830062876996645 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ZWINT|p.A199Qfs*76|1|0.22|ENSG00000122952|chr10:56358833-56358833|C/-|frameshift_variant', 'ENSG00000122952|ENST00000373944|ZWINT', 'ZWINT|p.Q139H|1|0.08|ENSG00000122952|chr10:56359693-56359693|C/A|missense_variant'] 47431 11553 IVLQIDNAR True PC9_epitope_Rep4 1040.5978433066398 1040.59674993586 52.199 2 0.14512631022397932 0.0007045974986788797 0.003383202517613338 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 40465 17592 HRDFISVTL True PC9_epitope_Rep5 1086.5821932425 1086.58108993586 72.676 2 0.14511551415718701 0.0007045974986788797 0.003384043897848589 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000545096.1_1_9:139981559-139982655:+|nuORF'] 21691 4278 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 23.477 2 0.14511101300494134 0.0007045974986788797 0.0033843947518767555 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 130922 10577 VTDFPGFDER True H1975_Epitope_Rep1 1181.5353026197297 1181.5342099358602 45.638 2 0.14510621168633686 0.0007045974986788797 0.003384769042993785 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 9969 22795 AYPEYLITF True PC9_epitope_Rep3 1115.55391280599 1115.55280993586 92.953 2 0.14510372885627199 0.0007045974986788797 0.0033849626103817474 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP15|p.Q667E|1|0.22|ENSG00000173200|chr3:122636062-122636062|C/G|missense_variant', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 85772 17963 QHDPETSVLVL True PC9_epitope_Rep1 1236.635016661 1236.6339099358602 73.888 2 0.14510027363337627 0.0007045974986788797 0.00338523200615212 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 9625 21326 AYANIISQF True PC9_epitope_Rep5 1025.5181960036098 1025.5170899358602 87.087 2 0.1450998015974311 0.0007045974986788797 0.0033852688113614354 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 20186 10965 ENGVYLIDVK True H1975_Epitope_Rep3 1148.6077392839998 1148.60664993586 47.266 2 0.14509819721312053 0.0007045974986788797 0.003385393910104535 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 142865 22066 YYTEFPTVL True PC9_epitope_Rep5 1131.54882742555 1131.5477299358602 89.904 2 0.14508203556923582 0.0007045974986788797 0.0033866543390425287 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 84816 8017 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.46472993586 35.785 2 0.14508137270378108 0.0007045974986788797 0.003386706045147929 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 67418 5799 LSSPATLNSR True PC9_epitope_Rep6 1044.5563724174801 1044.55526993586 30.502 2 0.14507897920972934 0.0007045974986788797 0.003386892753601632 ['CON__P00761'] 78050 14253 NVTEYVVRV True PC9_epitope_Rep4 1077.5818588893299 1077.5807699358602 62.729 2 0.1450777724858483 0.0007045974986788797 0.0033869868899675587 ['ENSG00000125651|ENST00000394456|GTF2F1', 'ENST00000595047.5_1_19:6392384-6393012:-|nuORF'] 60943 9162 LIDENDNKI True PC9_epitope_Rep5 1072.540053647 1072.53894993586 40.188 2 0.1450777308948881 0.0007045974986788797 0.0033869901345190572 ['ENST00000482091.1_1_10:1089912-1094811:-|nuORF', 'nc|ENSG00000067064|Q13907|IDI1', 'ENSG00000067064|ENST00000381344|IDI1'] 6725 15055 AQAPGVITGV True PC9_epitope_Rep5 911.5076313199099 911.50652993586 62.915 2 0.14507629869212482 0.0007045974986788797 0.003387101863942094 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 28065 18872 FQSSAVMAL True PC9_epitope_Rep4 952.4688032830398 952.46770993586 80.677 2 0.1450751242641476 0.0007045974986788797 0.0033871934864955424 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 12416 8243 DITSDTSGDFR True NCI_RA007_Epitope_Rep5 1212.5258601348398 1212.5247699358601 38.386 2 0.1450685723634473 0.0007045974986788797 0.003387704675738132 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 76294 13158 NPNQYNYIA True PC9_epitope_Rep2 1095.49852318819 1095.49742993586 55.883 2 0.14505928607692992 0.0007045974986788797 0.003388429337235725 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 92776 18980 RPADVIFATV True PC9_epitope_Rep2 1087.60259433391 1087.6014899358602 78.372 2 0.14505796011130512 0.0007045974986788797 0.003388532822403995 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 11782 20276 DHDRFWVL True PC9_epitope_Rep1 1086.52467836638 1086.5235899358602 82.819 2 0.14505496256059472 0.0007045974986788797 0.003388766778232708 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 64927 17840 LQEEPVEGF True PC9_epitope_Rep5 1046.49204082542 1046.49094993586 73.639 2 0.14504812170421102 0.0007045974986788797 0.0033893007603288043 ['ENSG00000107341|ENST00000263228|UBE2R2', 'ENST00000586788.1_1_19:531880-536341:+|nuORF', 'ENSG00000099804|ENST00000215574|CDC34'] 125064 11662 VIDSAELQAY True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 49.993 2 0.1450393165540539 0.0007045974986788797 0.0033899881939072818 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 28672 18284 FSPAGPILSIR True PC9_epitope_Rep4 1156.6604435632 1156.65934993586 78.4 2 0.145038952730303 0.0007045974986788797 0.0033900166012484014 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 87298 11236 QPQPQPYAV True PC9_epitope_Rep2 1026.5134449763398 1026.5123499358601 48.546 2 0.14502700836587218 0.0007045974986788797 0.0033909493480123276 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 75586 13570 NLDIIQQEY True H1975_Epitope_Rep3 1134.55570371114 1134.55517496793 57.479 1 0.145024230573872 0.0007045974986788797 0.003391166304972614 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 5007 13522 ALIARVTNV True PC9_epitope_Rep5 955.58146496651 955.58036993586 57.034 2 0.14501972200637703 0.0007045974986788797 0.0033915184719656554 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 132489 15220 VVDIQGVGDLY True H1975_Epitope_Rep1 1176.6026539035597 1176.60154993586 63.808 2 0.14501877800499582 0.0007045974986788797 0.0033915922130974565 ['ENSG00000103319|ENST00000263026|EEF2K'] 54484 18974 KYGVTFYNF True PC9_epitope_Rep4 1137.54949613189 1137.54838993586 81.073 2 0.14501096767237415 0.0007045974986788797 0.0033922023821871708 ['ENST00000510737.1_1_4:120160395-120160458:+|nuORF'] 16285 13606 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.3753949679301 57.474 1 0.14501086683715225 0.0007045974986788797 0.003392210260482276 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 28486 16046 FSDVMEDLY True H1975_Epitope_Rep1 1117.4637774722498 1117.46268993586 67.059 2 0.14500807873437843 0.0007045974986788797 0.0033924281032375755 ['ENSG00000167325|ENST00000300738|RRM1'] 134139 18923 VYLDKFIRL True PC9_epitope_Rep4 1165.68593003505 1165.68427490379 80.874 3 0.14499969506331756 0.0007045974986788797 0.00339308322811273 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 88632 5236 QTEERVQPEY True H1975_Epitope_Rep2 1277.58879474457 1277.58768993586 25.208 2 0.14499623017390678 0.0007045974986788797 0.003393354021538426 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 45243 19673 IPTPIVGV True PC9_epitope_Rep2 794.49019035062 794.48908993586 81.059 2 0.14498834516290343 0.0007045974986788797 0.003393970343216997 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 134096 17484 VYKTIMEQF True PC9_epitope_Rep2 1157.57908200801 1157.5779899358602 72.508 2 0.14498833380586182 0.0007045974986788797 0.0033939712310056607 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 86076 14608 QHSITPLAL True PC9_epitope_Rep4 978.5498304850599 978.54872993586 64.119 2 0.14497744827919848 0.0007045974986788797 0.00339482226709166 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 17830 9135 EHTNAIGTL True PC9_epitope_Rep3 954.4770594676199 954.47596993586 40.076 2 0.14497395240352873 0.0007045974986788797 0.0033950956214308507 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 8297 14747 ATIIDILTK True NCI_RA007_Epitope_Rep5 986.60119735158 986.60010993586 63.397 2 0.1449722509041645 0.0007045974986788797 0.003395228675331717 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 107292 5238 SVLDKSLTK True NCI_RA007_Epitope_Rep4 989.57571087973 989.5746099358599 26.687 2 0.14497067145075435 0.0007045974986788797 0.0033953521901159884 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ-CACNG4|1|fusion', 'ENST00000578938.1_1_17:65172688-65184471:-|nuORF'] 1174 6190 AEAPSPAPTP True H1975_Epitope_Rep3 936.4552613938799 936.45416993586 28.822 2 0.14496718930338007 0.0007045974986788797 0.003395624513179723 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 96202 12944 RYPSNLQLF True NCI_RA007_Epitope_Rep4 1136.59784330664 1136.59674993586 56.879 2 0.14496463478926053 0.0007045974986788797 0.0033958243040237536 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 35259 6493 GRDENSVEL True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 32.097 2 0.14496218587869936 0.0007045974986788797 0.0033960158464839893 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 7257 16952 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.5233099358602 70.224 2 0.1449531439200373 0.0007045974986788797 0.0033967231596716517 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 40723 7944 HRTDSEIAL True PC9_epitope_Rep5 1040.5250722892 1040.5239699358601 35.496 2 0.14494730361306787 0.0007045974986788797 0.003397180099342868 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 77503 14150 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41816993586 59.582 2 0.14494219872675237 0.0007045974986788797 0.0033975795504724666 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 71656 15266 M[Oxidation]EALPLLAA True H1975_Epitope_Rep2 943.5048548190299 943.50430496793 63.879 1 0.14494113271768447 0.0007045974986788797 0.0033976629702719367 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 46196 21698 ISMPDFDLHL True PC9_epitope_Rep2 1186.5692456003 1186.5681499358602 88.939 2 0.14494067068735866 0.0007045974986788797 0.0033976991267664325 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 40960 13214 HTDDPLTWDY True H1975_Epitope_Rep3 1261.52513185885 1261.52457496793 56.082 1 0.1449403223795669 0.0007045974986788797 0.003397726384080115 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 45553 6404 IQRTPKIQVYS True H1975_Epitope_Rep1 1331.75613485319 1331.7550299358602 29.692 2 0.14493808584378934 0.0007045974986788797 0.0033979014124937684 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 23112 14979 EVISKLYAV True PC9_epitope_Rep4 1020.5855472874398 1020.5849749679301 65.555 1 0.14493068194969105 0.0007045974986788797 0.003398480895640586 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 137047 14602 YALYDATYETK True PC9_epitope_Rep3 1336.61869789052 1336.6176099358602 61.298 2 0.1449287961974292 0.0007045974986788797 0.003398628504155129 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 49907 19652 KIIGAVDQIQL True PC9_epitope_Rep1 1196.71287305888 1196.71176993586 80.416 2 0.1449256755915235 0.0007045974986788797 0.00339887278565373 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 107237 9107 SVIVQPFSK True NCI_RA007_Epitope_Rep4 1003.57023157647 1003.56912993586 41.87 2 0.14491590229428303 0.0007045974986788797 0.003399637953705625 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-3|ZNF280D', 'nc|ENSG00000285253|Q6N043-6|ZNF280D'] 6880 20325 AQIDQYVGL True PC9_epitope_Rep1 1005.5131106231698 1005.51200993586 83.009 2 0.14490892613080023 0.0007045974986788797 0.0034001842340812155 ['nc|ENSG00000125744|O75298-2|RTN2', 'ENSG00000125744|ENST00000245923|RTN2', 'ENST00000591789.1_1_19:45989311-45991830:-|nuORF', 'ENST00000593187.5_1_19:45988968-45991824:-|nuORF', 'ENST00000593129.1_1_19:45988968-45992276:-|nuORF', 'nc|ENSG00000125744|O75298-3|RTN2'] 102895 14995 SPAPPLLHV True PC9_epitope_Rep2 929.53345214493 929.53234993586 62.935 2 0.14489188255628394 0.0007045974986788797 0.003401519227087348 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 38353 8845 HEIEVETIP True NCI_RA007_Epitope_Rep3 1065.53423999057 1065.5331499358601 41.884 2 0.1448880786797794 0.0007045974986788797 0.0034018172490728814 ['ENSG00000100811|ENST00000262238|YY1'] 23762 21649 EYGPIHILW True PC9_epitope_Rep1 1126.5811306133398 1126.58002993586 88.101 2 0.14488387083739337 0.0007045974986788797 0.0034021469507596364 ['ENSG00000162627|ENST00000306121|SNX7', 'nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7'] 21721 10965 ERSPVIQTL True PC9_epitope_Rep4 1041.58185888933 1041.5807699358602 49.947 2 0.1448711259091375 0.0007045974986788797 0.003403145761810715 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 115699 8726 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.5853349679301 37.944 1 0.14486757594663585 0.0007045974986788797 0.0034034240217436073 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 114786 20821 TQLESSWEL True PC9_epitope_Rep5 1091.51350454599 1091.5124099358602 85.137 2 0.14486118240061555 0.0007045974986788797 0.0034039252298823353 ['ENSG00000092148|ENST00000399332|HECTD1'] 18781 9427 ELDDTLKY True H1975_Epitope_Rep2 995.4811417885501 995.48004993586 41.228 2 0.14485977036379294 0.0007045974986788797 0.003404035933324777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 25736 7077 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45504496793 32.152 1 0.14485800686884473 0.0007045974986788797 0.0034041741960467117 ['ENSG00000084774|ENST00000264705|CAD'] 38706 9141 HGEIDYEAIVK True NCI_RA007_Epitope_Rep2 1272.6350166609998 1272.6339099358602 40.163 2 0.1448579655527952 0.0007045974986788797 0.003404177435402423 ['ENSG00000100519|ENST00000445930|PSMC6'] 141785 10345 YVDAGTPMY True H1975_Epitope_Rep3 1015.4320834211499 1015.43157496793 44.846 1 0.14485705330334755 0.0007045974986788797 0.003404248960456961 ['ENSG00000155189|ENST00000285518|AGPAT5'] 33079 9938 GINVTDFTR True H1975_Epitope_Rep1 1021.51925863277 1021.51816993586 43.162 2 0.1448565057604706 0.0007045974986788797 0.003404291891355233 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 29380 18629 FVDPAQITM True PC9_epitope_Rep6 1020.49501803088 1020.49392993586 84.299 2 0.14485303037494401 0.0007045974986788797 0.0034045643965713718 ['ENSG00000167325|ENST00000300738|RRM1'] 75112 12515 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 53.138 2 0.14485173588012668 0.0007045974986788797 0.0034046659035376677 ['ENSG00000171223|ENST00000302754|JUNB'] 95927 7875 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 36.986 3 0.14485050385593765 0.0007045974986788797 0.0034047625147030575 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 21692 4350 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 23.815 2 0.14485000208341747 0.0007045974986788797 0.003404801862785662 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 101356 22280 SLITRLLEV True PC9_epitope_Rep1 1042.63864548946 1042.63754993586 90.511 2 0.14484521262673505 0.0007045974986788797 0.003405177465949992 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 97167 9715 SDTFINLR True H1975_Epitope_Rep1 964.4977949122 964.49668993586 42.296 2 0.14484283069446627 0.0007045974986788797 0.0034053642793539936 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 107857 13687 SVVGQIAKL True PC9_epitope_Rep6 913.5596668927699 913.55856993586 64.433 2 0.14484101591555978 0.0007045974986788797 0.003405506618121637 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 41027 20411 HTIGFGIYEV True PC9_epitope_Rep5 1134.57095985246 1134.5698699358602 83.549 2 0.14484006942618097 0.0007045974986788797 0.00340558085657983 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000480581.1_1_1:223939741-223945196:+|nuORF'] 15090 20740 DYTIGFGKF True PC9_epitope_Rep5 1046.50729696674 1046.5061899358602 84.835 2 0.14483811101202929 0.0007045974986788797 0.0034057344710656757 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 8780 18951 AVDLTLPKV True PC9_epitope_Rep5 954.57498260374 954.57388993586 77.918 2 0.14483428923905706 0.0007045974986788797 0.0034060342638932866 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 97434 5127 SEEEGVPST True H1975_Epitope_Rep3 933.39272070697 933.39217496793 24.832 1 0.14483402524844285 0.0007045974986788797 0.0034060549731800213 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 23493 3984 EVVEEAENGR True NCI_RA007_Epitope_Rep4 1130.5203808315798 1130.5192899358601 21.571 2 0.14482743245013163 0.0007045974986788797 0.003406572199379067 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 129187 11481 VQSNRILGV True PC9_epitope_Rep1 984.5716285587998 984.57052993586 49.041 2 0.1448272822513788 0.0007045974986788797 0.0034065839838626514 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 129309 20487 VQWENSFVSV True PC9_epitope_Rep4 1193.57168812845 1193.5705899358602 86.952 2 0.14482366639719021 0.0007045974986788797 0.0034068676933447844 ['ENSG00000174231|ENST00000304992|PRPF8'] 58755 7614 LESELIKSA True H1975_Epitope_Rep3 988.5440763982799 988.54296993586 34.268 2 0.14481686065332106 0.0007045974986788797 0.003407401753681701 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 140851 16509 YSDSFPMEL True H1975_Epitope_Rep2 1087.45321278855 1087.4526749679299 68.72 1 0.14481433610837818 0.0007045974986788797 0.0034075998809222356 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 104112 5036 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 24.229 2 0.14481196049617362 0.0007045974986788797 0.003407786330317723 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 35719 8756 GTFLEGVAK True NCI_RA007_Epitope_Rep5 920.4967322830398 920.49562993586 40.346 2 0.14480755277877863 0.0007045974986788797 0.003408132295885674 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 113501 15109 TLTEEGVIKV True PC9_epitope_Rep5 1087.6124903112698 1087.6113899358602 63.122 2 0.1448063005591106 0.0007045974986788797 0.0034082305900601656 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 54435 15199 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.6997499358602 67.306 2 0.14480515067817687 0.0007045974986788797 0.0034083208535389234 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 38271 8615 HEEIAMATVTA True H1975_Epitope_Rep3 1171.55432381215 1171.5532299358601 38.13 2 0.14479846223096762 0.0007045974986788797 0.0034088459310821755 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 42730 9956 IELAYEQVAKA True H1975_Epitope_Rep1 1233.6605031328497 1233.6594099358601 43.232 2 0.14479360930262944 0.0007045974986788797 0.0034092269612521786 ['ENSG00000213719|ENST00000375784|CLIC1'] 3969 13727 AHDTTLVAL True PC9_epitope_Rep1 939.50254593947 939.50144993586 57.649 2 0.14478957062419912 0.0007045974986788797 0.0034095440924300498 ['ENSG00000134575|ENST00000672073|ACP2'] 9212 4331 AVNAHSNILK True NCI_RA007_Epitope_Rep2 1065.59309227937 1065.59198993586 21.484 2 0.14478256926895902 0.0007045974986788797 0.003410093932813577 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF', 'ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 35025 17450 GQVDMDIKL True PC9_epitope_Rep1 1017.51648175145 1017.51538993586 71.919 2 0.14477819915042978 0.0007045974986788797 0.003410437177827179 ['ENSG00000129250|ENST00000320785|KIF1C', 'KIF1C|p.D675Gfs*5|1|0.04|ENSG00000129250|chr17:5022102-5022103|-/G|frameshift_variant'] 89439 19835 QYEEQFVTL True PC9_epitope_Rep4 1155.5448046742697 1155.54370993586 84.426 2 0.14477668975954325 0.0007045974986788797 0.0034105557388553406 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 77751 6734 NTPILVDGK True NCI_RA007_Epitope_Rep1 955.5338460677499 955.53274993586 30.205 2 0.14477644246990432 0.0007045974986788797 0.0034105751635804824 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI|p.R106W|1|0.08|ENSG00000105220|chr19:34368616-34368616|C/T|missense_variant'] 74753 14459 NHASLISAL True PC9_epitope_Rep2 924.50288029264 924.50178993586 60.886 2 0.144764532858279 0.0007045974986788797 0.0034115107996699253 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 3244 5640 AGEVFIHK True PC9_epitope_Rep1 899.4865019525099 899.48540993586 26.52 2 0.14475704737013417 0.0007045974986788797 0.003412099000804714 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENST00000486613.6_1_X:70504267-70513876:+|nuORF', 'ENST00000566277.2_1_16:69791529-69791679:-|nuORF'] 142458 19773 YYFPVKNVI True PC9_epitope_Rep2 1141.6171817688898 1141.6160899358601 81.443 2 0.1447562634049132 0.0007045974986788797 0.0034121606097273676 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 76000 19030 NLVRELLAV True PC9_epitope_Rep6 1025.6233297784897 1025.62222993586 85.841 2 0.1447538698228066 0.0007045974986788797 0.003412348719316722 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'PSAT1|p.D68Y|1|0.4|ENSG00000135069|chr9:78304745-78304745|G/T|missense_variant'] 100804 9841 SLEIDLDSM[Oxidation]R True H1975_Epitope_Rep1 1193.55980349585 1193.5587099358602 42.784 2 0.14474002516992357 0.0007045974986788797 0.003413436961005898 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'CON__H-INV:HIT000015463', 'ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 6174 9582 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 41.809 2 0.14473591824527357 0.0007045974986788797 0.003413759847004907 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 54790 20200 KYNLINEYF True PC9_epitope_Rep2 1202.5971746003 1202.5960699358602 83.114 2 0.14473552618200156 0.0007045974986788797 0.0034137906725660912 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 141477 13688 YTIDTENSTV True PC9_epitope_Rep5 1141.51389846881 1141.51280993586 57.678 2 0.1447354396861637 0.0007045974986788797 0.003413797473247332 ['nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A'] 97318 5260 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 25.301 2 0.14472678384145243 0.0007045974986788797 0.003414478101703847 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 12651 9158 DLDHSIGTQY True H1975_Epitope_Rep2 1147.51456717515 1147.51346993586 40.177 2 0.14472582958769584 0.0007045974986788797 0.003414553145063894 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 95959 9129 RYLEQLHQL True NCI_RA007_Epitope_Rep2 1198.64585612822 1198.64422490379 40.115 3 0.14471541295420703 0.0007045974986788797 0.0034153724249132494 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 66098 8113 LSEKPTVTTVY True H1975_Epitope_Rep2 1236.6601687796801 1236.65906993586 36.156 2 0.14471104450829564 0.0007045974986788797 0.003415716066179086 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 85811 13490 QHDPYITSI True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 56.909 2 0.14470801116904186 0.0007045974986788797 0.0034159547022597466 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 91373 18936 RHDDYLVML True PC9_epitope_Rep5 1160.5648289262 1160.56318490379 77.86 3 0.14470579134388983 0.0007045974986788797 0.003416129348801346 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 77533 11742 NTDIAENLY True H1975_Epitope_Rep2 1051.48220441771 1051.48110993586 50.241 2 0.14470445295776097 0.0007045974986788797 0.0034162346517003636 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 114783 12125 TQLEQKVEL True PC9_epitope_Rep5 1086.5920892198599 1086.59098993586 51.627 2 0.1446999146667061 0.0007045974986788797 0.0034165917439658074 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 43676 11232 IHDGM[Oxidation]NLEL True PC9_epitope_Rep2 1056.49099566004 1056.4898899358602 48.531 2 0.1446840324226291 0.0007045974986788797 0.0034178417192424607 ['ENSG00000198258|ENST00000586895|UBL5'] 105737 20938 SSFPRFYFV True PC9_epitope_Rep2 1148.5654805492 1148.5643899358602 85.985 2 0.14468244948114967 0.0007045974986788797 0.0034179663258829766 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 25754 10547 FETAVAPNV True H1975_Epitope_Rep3 946.4759968384599 946.47488993586 45.635 2 0.14467918073474736 0.0007045974986788797 0.0034182236506929806 ['ENSG00000157933|ENST00000378536|SKI'] 103805 12264 SPVYVGRVV True PC9_epitope_Rep5 974.5549158654999 974.55380993586 52.162 2 0.14467829715171082 0.0007045974986788797 0.0034182932121118743 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 55006 15102 KYQIINEEF True PC9_epitope_Rep6 1182.5920892198599 1182.59098993586 70.148 2 0.14467010739661906 0.0007045974986788797 0.0034189380299703516 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 88244 5136 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep3 1128.43935401 1128.43824993586 24.859 2 0.14466955828553382 0.0007045974986788797 0.0034189812683857873 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 65807 12532 LSDISVVSNY True H1975_Epitope_Rep3 1095.54480467427 1095.54427496793 53.401 1 0.14466551345383255 0.0007045974986788797 0.0034192997855488354 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 114490 18538 TPYNYPVPV True PC9_epitope_Rep4 1048.5229470308798 1048.52184993586 79.381 2 0.14466257667901797 0.0007045974986788797 0.003419531065355872 ['ENSG00000170906|ENST00000485876|NDUFA3'] 142102 14241 YVPETVYRV True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 59.863 2 0.1446616707911628 0.0007045974986788797 0.0034196024098721634 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 134013 10450 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 45.134 3 0.14465915386879064 0.0007045974986788797 0.0034198006415181274 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 26072 20194 FGLARAFGV True PC9_epitope_Rep5 936.5181364339599 936.51702993586 82.722 2 0.14465622687067925 0.0007045974986788797 0.0034200311848975058 ['nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'ENST00000554619.5_1_12:56361683-56363594:+|nuORF', 'ENST00000556656.5_1_12:56361683-56365109:+|nuORF'] 40224 12774 HQIEAVDGEEL True PC9_epitope_Rep1 1238.5778957076998 1238.57678993586 54.009 2 0.14465364082361762 0.0007045974986788797 0.0034202348863035933 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 24124 19839 EYPELRGVF True PC9_epitope_Rep3 1108.5553097883198 1108.5542099358602 81.545 2 0.14465168044656693 0.0007045974986788797 0.003420389312082365 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 22244 12004 ESYSVYVYK True PC9_epitope_Rep4 1136.5389910178399 1136.5378899358602 53.97 2 0.14465055509987493 0.0007045974986788797 0.003420477962719161 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 77844 10629 NVELDPEIQ True NCI_RA007_Epitope_Rep3 1055.51350454599 1055.5124099358602 48.856 2 0.14465026182328142 0.0007045974986788797 0.003420501066335937 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 141383 8913 YTEEDAVSY True H1975_Epitope_Rep3 1075.43458551895 1075.43407496793 39.283 1 0.14464805754888604 0.0007045974986788797 0.003420674718673311 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 137412 5274 YEAPGVREA True NCI_RA007_Epitope_Rep5 990.4770594676198 990.47596993586 26.981 2 0.14464600496952204 0.0007045974986788797 0.003420836428378228 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 130136 8582 VSDSGISTDY True H1975_Epitope_Rep2 1042.44548455582 1042.44497496793 37.964 1 0.14464538220658257 0.0007045974986788797 0.003420885493420548 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 97493 7213 SEELQSVQA True H1975_Epitope_Rep3 989.4665543535699 989.46544993586 32.716 2 0.14464510000897138 0.0007045974986788797 0.003420907726890461 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF', 'ENST00000486527.6_1_2:25016788-25037388:+|nuORF', 'ENST00000498362.1_1_2:25016366-25039516:+|nuORF'] 21473 13723 ERLGQFM[Oxidation]TL True PC9_epitope_Rep6 1109.55393026977 1109.55282993586 64.573 2 0.14463396498201833 0.0007045974986788797 0.0034217851355384517 ['ENSG00000113739|ENST00000265087|STC2'] 117522 5159 TVRSSTSSI True PC9_epitope_Rep4 936.48762415132 936.48652993586 26.529 2 0.14463351537123112 0.0007045974986788797 0.0034218205682928315 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 21898 16469 ESDLPDELLY True H1975_Epitope_Rep1 1192.54994962436 1192.54884993586 68.717 2 0.1446321562854644 0.0007045974986788797 0.00342192767681854 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 26937 18700 FLDPRPLTV True PC9_epitope_Rep5 1056.59678067748 1056.59568993586 76.947 2 0.14462417078520629 0.0007045974986788797 0.003422557075358609 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 46447 10164 ISTEVNPKL True PC9_epitope_Rep2 999.56006081559 999.55896993586 44.433 2 0.14461976426942033 0.0007045974986788797 0.0034229044359121905 ['ENSG00000007545|ENST00000397412|CRAMP1'] 76846 12498 NRDDSNLYI True PC9_epitope_Rep5 1108.51490152832 1108.51380993586 53.072 2 0.14461346526807603 0.0007045974986788797 0.003423401039731619 ['ENSG00000100714|ENST00000652337|MTHFD1', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 85103 9651 QELDGELEA True H1975_Epitope_Rep3 1002.4505699362599 1002.4499749679301 42.139 1 0.14461246896295243 0.0007045974986788797 0.00342347959348874 ['ENSG00000089154|ENST00000300648|GCN1'] 52842 12430 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 52.838 2 0.1446087250265434 0.0007045974986788797 0.0034237748004616983 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 71472 18408 LYVVDLKKF True PC9_epitope_Rep3 1123.6641319613097 1123.66249490379 76.013 3 0.14460382172650532 0.0007045974986788797 0.0034241614607560525 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 59827 10801 LGEYGFQNA True H1975_Epitope_Rep3 997.4505103666099 997.4499649679301 46.625 1 0.14460280074999451 0.0007045974986788797 0.0034242419775161025 ['CON__P02769'] 112100 18543 TIVNELVRV True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 76.677 2 0.14459917335921796 0.0007045974986788797 0.0034245280578329403 ['ENSG00000171298|ENST00000302262|GAA'] 60616 20273 LHIDPNFASL True PC9_epitope_Rep5 1125.58185888933 1125.5807699358602 83.031 2 0.1445979050127509 0.0007045974986788797 0.0034246280937273456 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 105030 14877 SRDMTMFVT True PC9_epitope_Rep2 1086.48380172418 1086.4827099358602 62.487 2 0.1445957293034415 0.0007045974986788797 0.00342479970109761 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 32646 9245 GGNFGFGDSR True PC9_epitope_Rep4 1012.4362572847999 1012.43516993586 43.158 2 0.1445956957015772 0.0007045974986788797 0.00342480235148536 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 47463 4946 IVNTNVPR True NCI_RA007_Epitope_Rep2 911.51886470995 911.51776993586 23.859 2 0.14459561719702776 0.0007045974986788797 0.0034248085436347337 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 36008 21033 GTYDIFYTA True PC9_epitope_Rep2 1049.47057710485 1049.47007496793 86.356 1 0.14459553682008525 0.0007045974986788797 0.0034248148834830966 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 78059 19500 NVVDVFHAV True PC9_epitope_Rep1 998.51853035678 998.51742993586 79.825 2 0.14458884281177997 0.0007045974986788797 0.0034253429240528903 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 104861 5291 SRAPSVATV True PC9_epitope_Rep4 886.4872302285 886.48612993586 27.056 2 0.14458077798618554 0.0007045974986788797 0.003425979205626588 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 112787 19992 TLIDLPGITKV True PC9_epitope_Rep4 1168.70672504928 1168.70562993586 85.033 2 0.14457848753190117 0.0007045974986788797 0.003426159934457398 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3'] 97561 7030 SEESPQVVEA True H1975_Epitope_Rep3 1073.48768372097 1073.4865899358601 32.004 2 0.14457673987355457 0.0007045974986788797 0.003426297840217937 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 111038 10583 THDEAVQVL True PC9_epitope_Rep5 1010.5032742154598 1010.50216993586 45.695 2 0.14456582477360905 0.0007045974986788797 0.0034271592632875245 ['ENSG00000101400|ENST00000217381|SNTA1', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 118515 16241 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.52387496793 67.608 1 0.14456532240504247 0.0007045974986788797 0.00342719891554884 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 11738 11448 DHASIQMNV True PC9_epitope_Rep2 1013.46002950449 1013.4589299358599 49.354 2 0.14455930210894902 0.0007045974986788797 0.0034276741366956252 ['ENSG00000171858|ENST00000343986|RPS21'] 106374 21529 STIANVWLV True PC9_epitope_Rep4 1001.55458151233 1001.55348993586 90.991 2 0.14455663623753953 0.0007045974986788797 0.0034278845921837725 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 76444 15007 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 62.979 2 0.1445525609854864 0.0007045974986788797 0.0034282063351214476 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 131577 20972 VTLGPVPEI True PC9_epitope_Rep5 923.53278343859 923.53168993586 85.729 2 0.1445440333081438 0.0007045974986788797 0.003428879696058248 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 63440 21949 LLVSLLEHL True PC9_epitope_Rep2 1035.63283183303 1035.6317299358602 89.902 2 0.1445376024581776 0.0007045974986788797 0.0034293875745812327 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000461493.1_1_7:6089476-6098783:-|nuORF'] 35023 14448 GQVAYLEKL True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 63.483 2 0.14452985299667287 0.0007045974986788797 0.0034299996901725064 ['ENSG00000167306|ENST00000285039|MYO5B', 'MYO5B|p.L1524Tfs*10|1|0.05|ENSG00000167306|chr18:49843282-49843283|-/T|frameshift_variant', 'MYO5B|p.I1001Dfs*12|1|0.24|ENSG00000167306|chr18:49894986-49894987|-/T|frameshift_variant', 'ENST00000560809.5_1_15:52532054-52548856:-|nuORF', 'ENST00000558902.5_1_15:52529812-52548856:-|nuORF', 'nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A', 'ENSG00000128833|ENST00000261839|MYO5C'] 16327 13724 EEHEWFIPA True H1975_Epitope_Rep2 1156.5189242796 1156.5178299358602 57.934 2 0.14452915731475174 0.0007045974986788797 0.003430054646105748 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 104692 8814 SQTTVYEKL True PC9_epitope_Rep4 1067.54989005471 1067.5487899358602 41.432 2 0.14452691169959234 0.0007045974986788797 0.0034302320461865104 ['ENSG00000118193|ENST00000367350|KIF14'] 134424 14392 VYPLMKEYF True NCI_RA007_Epitope_Rep5 1188.5889184157197 1188.58782993586 62.041 2 0.14452314937717048 0.0007045974986788797 0.0034305292841924013 ['ENSG00000100109|ENST00000407690|TFIP11'] 118116 16079 TYHPGVPVF True PC9_epitope_Rep2 1015.5127167003499 1015.51160993586 67.105 2 0.14451965710848186 0.0007045974986788797 0.0034308052098065123 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 105865 8069 SSNIFTVAK True NCI_RA007_Epitope_Rep5 965.51819600361 965.51708993586 37.726 2 0.1445163413679801 0.0007045974986788797 0.0034310672082569402 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.Q878H|1|0.06|ENSG00000100280|chr22:29330510-29330510|C/G|missense_variant', 'ENST00000482818.1_1_22:29726183-29727937:-|nuORF'] 55446 13694 LAFNGDLAKA True PC9_epitope_Rep2 1018.5447451046199 1018.54364993586 57.964 2 0.1445072954272108 0.0007045974986788797 0.003431782088572965 ['ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF', 'TNKS1BP1|p.P738Hfs*87|1|0.22|ENSG00000149115|chr11:57310498-57310498|G/-|frameshift_variant'] 53380 8043 KQTEVLVTA True PC9_epitope_Rep5 987.5600608155898 987.55896993586 35.875 2 0.14450050592606067 0.0007045974986788797 0.003432318744749243 ['nc|ENSG00000174606|Q5VTE6-2|ANGEL2', 'ENSG00000174606|ENST00000366962|ANGEL2'] 3875 15045 AGYTDNLVRV True PC9_epitope_Rep3 1106.57202248162 1106.57092993586 63.001 2 0.14449773287094553 0.0007045974986788797 0.0034325379567223084 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 37908 9952 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 43.142 2 0.14449341981458555 0.0007045974986788797 0.0034328789345227317 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 85023 8081 QEHITTVVV True H1975_Epitope_Rep3 1024.5553097883198 1024.5542099358602 36.057 2 0.14448945696594734 0.0007045974986788797 0.0034331922555694127 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114438859-114442862:-|nuORF'] 98428 10399 SFETTEESLR True PC9_epitope_Rep2 1197.55134660669 1197.5502499358602 45.322 2 0.14448833577045342 0.0007045974986788797 0.0034332809075991655 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 1430 14632 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48601496793 61.44 1 0.14448563904911535 0.0007045974986788797 0.00343349414450779 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 107151 16544 SVIEEHANWSV True PC9_epitope_Rep5 1269.59896550545 1269.5978699358602 68.639 2 0.14448244255908585 0.0007045974986788797 0.0034337469164910897 ['ENSG00000121879|ENST00000263967|PIK3CA'] 95100 16045 RVAQLEQVYI True PC9_epitope_Rep4 1217.6768219033297 1217.67572993586 69.651 2 0.14448061810943613 0.0007045974986788797 0.0034338911985751118 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 127172 11018 VLVDQTTGLSR True PC9_epitope_Rep3 1187.65100107831 1187.64990993586 47.371 2 0.14447589715909756 0.0007045974986788797 0.0034342645711989955 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 29922 11444 FVYDEPGHAV True PC9_epitope_Rep4 1132.5189242795998 1132.5178299358602 51.787 2 0.14447170586027028 0.0007045974986788797 0.0034345960883020595 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 140370 11772 YRDPYTGQSV True PC9_epitope_Rep3 1184.5462016566 1184.5451099358602 50.3 2 0.14446233649494555 0.0007045974986788797 0.0034353372873470334 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 90113 6690 REAQSLISA True NCI_RA007_Epitope_Rep1 973.5192586327698 973.51816993586 30.033 2 0.1444586004300718 0.0007045974986788797 0.003435632887183175 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 41233 12263 HVLEEVQQV True PC9_epitope_Rep5 1079.56112344475 1079.56002993586 52.158 2 0.14445676753967407 0.0007045974986788797 0.0034357779158786304 ['ENSG00000136026|ENST00000378026|CKAP4'] 140755 16796 YSDEFGNLDF True H1975_Epitope_Rep1 1205.4876837209702 1205.4865899358601 70.01 2 0.1444558451268201 0.0007045974986788797 0.0034358509047213923 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 121807 16359 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 68.17 2 0.14445288748022367 0.0007045974986788797 0.0034360849482763254 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 76499 19264 NQIGAKFWEV True PC9_epitope_Rep2 1190.60840799034 1190.60730993586 79.473 2 0.14444989858263912 0.0007045974986788797 0.00343632148086256 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 138332 13044 YHEDIHTYL True PC9_epitope_Rep5 1189.54038800017 1189.53874490379 55.178 3 0.14444042336707086 0.0007045974986788797 0.0034370714285369857 ['ENSG00000145386|ENST00000274026|CCNA2'] 96302 15933 RYSDSTFTF True PC9_epitope_Rep2 1122.49818883502 1122.49708993586 66.534 2 0.1444373767443079 0.0007045974986788797 0.0034373125982397955 ['ENSG00000151883|ENST00000281631|PARP8'] 133998 10154 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5281849037901 43.933 3 0.1444330219167921 0.0007045974986788797 0.0034376573542062843 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 8862 20219 AVFPDDM[Oxidation]PTL True PC9_epitope_Rep1 1120.51106239828 1120.50996993586 82.603 2 0.14442778208171772 0.0007045974986788797 0.0034380722185518107 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 9863 12206 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51257496793 52.261 1 0.14442351521336688 0.0007045974986788797 0.0034384100849191735 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 17101 12802 EGLPVALDK True PC9_epitope_Rep2 940.5229470308799 940.52184993586 54.544 2 0.14441958121718734 0.0007045974986788797 0.0034387216224622576 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 140380 19920 YRDWFSSQL True PC9_epitope_Rep2 1200.55637241748 1200.55526993586 82.019 2 0.14441955156583924 0.0007045974986788797 0.003438723970692023 ['ENST00000522359.2_1_11:61630757-61632750:+|nuORF', 'nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2'] 77155 12159 NRPNLYYEV True PC9_epitope_Rep6 1166.57202248162 1166.57092993586 58.126 2 0.1444189380871329 0.0007045974986788797 0.003438772555314657 ['ENSG00000004700|ENST00000444129|RECQL'] 96569 14761 SAFDHFASV True PC9_epitope_Rep6 979.43994568291 979.43884993586 68.731 2 0.14441500632918092 0.0007045974986788797 0.003439083948205266 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 107909 14107 SVVSDILFK True NCI_RA007_Epitope_Rep5 1006.5698972233 1006.56880993586 60.953 2 0.1444091503001623 0.0007045974986788797 0.0034395477941456553 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 124721 14821 VHAELADVL True PC9_epitope_Rep6 965.5181960036099 965.51708993586 68.98 2 0.14440294858881136 0.0007045974986788797 0.0034400390887391157 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'CCT6B|p.I363*|1|0.11|ENSG00000132141|chr17:34939308-34939309|AT/-|frameshift_variant', 'CCT6B|p.E364Rfs*28|1|0.12|ENSG00000132141|chr17:34939306-34939306|C/-|frameshift_variant', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 94916 16781 RTFDETVSTYV True PC9_epitope_Rep4 1316.62484590012 1316.6237499358601 72.517 2 0.14439971132705498 0.0007045974986788797 0.003440295569704684 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 99767 21339 SIIQRLLEV True PC9_epitope_Rep2 1069.64954452633 1069.64844993586 87.547 2 0.14438286510056988 0.0007045974986788797 0.0034416305649650238 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 17376 18336 EHDLLQAAL True PC9_epitope_Rep5 1008.5240096600398 1008.52290993586 75.544 2 0.1443806818594057 0.0007045974986788797 0.0034418036156504492 ['ENSG00000135686|ENST00000564996|KLHL36', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 11729 6453 DHASIQM[Oxidation]NV True PC9_epitope_Rep1 1029.45494450449 1029.45384993586 29.627 2 0.14437288419994343 0.0007045974986788797 0.0034424217536703624 ['ENSG00000171858|ENST00000343986|RPS21'] 31970 6343 GEPTNFVHTA True NCI_RA007_Epitope_Rep5 1071.49852318819 1071.49742993586 31.073 2 0.1443688013685489 0.0007045974986788797 0.0034427454528891946 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 285 12632 AAGSPVFL True H1975_Epitope_Rep2 760.41194002992 760.41139496793 53.689 1 0.14436419860644034 0.0007045974986788797 0.0034431104100413968 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 141932 19841 YVFPGVTRL True PC9_epitope_Rep1 1050.58621599378 1050.5851099358601 81.134 2 0.14436358106223038 0.0007045974986788797 0.0034431593786015888 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 31994 5557 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 26.383 1 0.14436338322362086 0.0007045974986788797 0.003443175066486036 ['ENSG00000108344|ENST00000264639|PSMD3'] 128760 20862 VPYLVGQVV True PC9_epitope_Rep5 972.5644179200399 972.56332993586 85.297 2 0.14436059333705703 0.0007045974986788797 0.003443396301935584 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 25596 15496 FELPQTPLA True H1975_Epitope_Rep2 1014.5385970950199 1014.53750993586 64.763 2 0.14435706355031086 0.0007045974986788797 0.0034436762310251293 ['ENSG00000113369|ENST00000265138|ARRDC3'] 84259 20682 PYNDYFEYF True PC9_epitope_Rep6 1256.50260550912 1256.5015099358602 92.315 2 0.14434907984769574 0.0007045974986788797 0.003444309460477499 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 35934 10311 GTSSLFIYK True NCI_RA007_Epitope_Rep5 1014.53859709502 1014.53750993586 46.292 2 0.14434665211080616 0.0007045974986788797 0.0034445020399922386 ['ENSG00000179941|ENST00000650064|BBS10'] 99309 7467 SHSELIHNL True PC9_epitope_Rep4 1048.5301576696402 1048.5290699358602 36.076 2 0.14433807786251324 0.0007045974986788797 0.0034451822753094525 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 73219 19698 MSDLLSPLLY True H1975_Epitope_Rep1 1150.59439771898 1150.5938749679299 81.993 1 0.14433200406021132 0.0007045974986788797 0.003445664219258951 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 54670 12573 KYLSVQGQLF True NCI_RA007_Epitope_Rep4 1181.64445914589 1181.6433699358602 55.381 2 0.1443311190790194 0.0007045974986788797 0.0034457344463188627 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 92885 16816 RPFQSELFA True PC9_epitope_Rep5 1093.55564414149 1093.5545499358602 69.691 2 0.14433055653377233 0.0007045974986788797 0.0034457790874402724 ['ENST00000488504.5_1_22:50695267-50699938:-|nuORF', 'nc|ENSG00000188130|P53778-2|MAPK12', 'ENSG00000188130|ENST00000215659|MAPK12'] 41236 9918 HVLEEVQQV True PC9_epitope_Rep6 1079.56112344475 1079.56002993586 48.66 2 0.14432476134954564 0.0007045974986788797 0.0034462390012635303 ['ENSG00000136026|ENST00000378026|CKAP4'] 21028 14052 EQSRIITVL True PC9_epitope_Rep6 1057.6131590176099 1057.61206993586 65.921 2 0.1443222781622034 0.0007045974986788797 0.003446436089100053 ['ENSG00000158006|ENST00000374282|PAFAH2'] 75901 11031 NLQTVNVDEN True PC9_epitope_Rep1 1144.53603089572 1144.5349299358602 47.319 2 0.144315930806321 0.0007045974986788797 0.0034469399226092707 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 115935 4225 TSGPTTPLK True NCI_RA007_Epitope_Rep4 900.4916469026 900.49054993586 22.565 2 0.1443148758325037 0.0007045974986788797 0.003447023670263042 ['ENSG00000188112|ENST00000341865|C6orf132'] 11746 10180 DHASIQMNV True PC9_epitope_Rep6 1013.46002950449 1013.4589299358599 49.791 2 0.14431340463914608 0.0007045974986788797 0.003447140462310195 ['ENSG00000171858|ENST00000343986|RPS21'] 44312 15620 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep2 1067.5208988059899 1067.5198099358602 65.238 2 0.14431220629260227 0.0007045974986788797 0.00344723559706498 ['ENSG00000138160|ENST00000260731|KIF11'] 53669 4391 KSDSGKPYYY True H1975_Epitope_Rep1 1206.55570371114 1206.55460993586 21.894 2 0.1443034603446688 0.0007045974986788797 0.0034479300024152643 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 141236 8243 YTDATPLRV True H1975_Epitope_Rep2 1034.53965972418 1034.53856993586 36.66 2 0.1442906616347578 0.0007045974986788797 0.003448946436878703 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 140198 10268 YQVAAAESHPL True PC9_epitope_Rep2 1184.5825871653199 1184.5814899358602 44.829 2 0.14428814965164044 0.0007045974986788797 0.0034491459658440053 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 74780 15071 NHDSRLWSL True PC9_epitope_Rep1 1126.55195574338 1126.55084993586 62.79 2 0.14428742068938794 0.0007045974986788797 0.0034492038700848554 ['ENSG00000118898|ENST00000345988|PPL'] 65328 9423 LRDENVNVV True PC9_epitope_Rep1 1056.5563724174801 1056.55526993586 41.104 2 0.14428678029925532 0.0007045974986788797 0.0034492547395024347 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 114725 15109 TQILSVPKV True PC9_epitope_Rep4 983.6015317047498 983.60042993586 66.046 2 0.14428440763033706 0.0007045974986788797 0.0034494432190544824 ['nc|ENSG00000120802|P42166|TMPO'] 73032 15653 M[Oxidation]RDPIRILV True PC9_epitope_Rep1 1127.64849936095 1127.64685490379 65.029 3 0.1442811288696028 0.0007045974986788797 0.00344970369336449 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 87598 6000 QQMGQKVQL True NCI_RA007_Epitope_Rep3 1058.5542642424998 1058.55316993586 30.578 2 0.14428089244817224 0.0007045974986788797 0.0034497224761271877 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000481145.1_1_1:89729385-89732242:-|nuORF', 'GBP5|p.K427Rfs*11|1|0.04|ENSG00000154451|chr1:89263818-89263819|-/AGTAGTAATCCTTTTC|frameshift_variant', 'ENSG00000162645|ENST00000370466|GBP2', 'ENSG00000154451|ENST00000370459|GBP5', 'nc|ENSG00000154451|Q96PP8-2|GBP5'] 74799 10323 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.4657899358601 45.035 2 0.1442735645547016 0.0007045974986788797 0.003450304699117706 ['ENSG00000144597|ENST00000396842|EAF1'] 6833 18945 AQFEHTILL True PC9_epitope_Rep3 1070.5760452329 1070.57494993586 78.097 2 0.14427201552783567 0.0007045974986788797 0.0034504277864176322 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 90816 8151 RETESQLLP True H1975_Epitope_Rep2 1071.5560380643099 1071.5549499358601 36.303 2 0.1442675292407818 0.0007045974986788797 0.0034507842961012977 ['ENSG00000171311|ENST00000370902|EXOSC1', 'ENST00000471049.5_1_10:99197505-99205308:-|nuORF', 'ENST00000476234.5_1_10:99200926-99205742:-|nuORF', 'ENST00000472345.5_1_10:99197505-99205641:-|nuORF'] 75827 17817 NLPDEIYHV True PC9_epitope_Rep3 1098.5345743437401 1098.53346993586 73.732 2 0.1442671937633136 0.0007045974986788797 0.0034508109568031843 ['ENSG00000148335|ENST00000372483|NTMT1'] 6746 4935 AQDEERQASL True PC9_epitope_Rep3 1145.53127986845 1145.53018993586 24.075 2 0.1442615904017706 0.0007045974986788797 0.00345125629132824 ['ENSG00000184575|ENST00000332707|XPOT'] 75613 13358 NLDQPDLYY True H1975_Epitope_Rep2 1139.51350454599 1139.51297496793 56.515 1 0.1442611221462183 0.0007045974986788797 0.0034512935091381516 ['ENSG00000171853|ENST00000324266|TRAPPC12'] 115308 10503 TRHPENWTL True PC9_epitope_Rep5 1152.56760580752 1152.56650993586 45.386 2 0.14425888648225038 0.0007045974986788797 0.003451471209304965 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 101266 23103 SLIADLEQL True PC9_epitope_Rep5 1000.5440763982799 1000.54296993586 93.852 2 0.1442575166768812 0.0007045974986788797 0.0034515800918041043 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 99198 19156 SHLDYDITL True PC9_epitope_Rep5 1075.5185899264302 1075.51748993586 78.72 2 0.14425126196050386 0.0007045974986788797 0.003452077307361231 ['ENSG00000163960|ENST00000296328|UBXN7'] 38291 6318 HEFDEQVAA True NCI_RA007_Epitope_Rep4 1044.4512386426 1044.45014993586 30.907 2 0.14424950132532835 0.0007045974986788797 0.003452217281006607 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF'] 110097 4933 TEMEHEVAC True H1975_Epitope_Rep2 1047.40013166987 1047.3990299358602 24.057 2 0.14424857370744923 0.0007045974986788797 0.0034522910305544476 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 32039 13125 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.4912699358601 55.607 2 0.1442382730355625 0.0007045974986788797 0.0034531100827444685 ['ENSG00000051523|ENST00000261623|CYBA'] 109600 5715 TEADSGYTP True H1975_Epitope_Rep2 939.3821560232699 939.38160496793 26.981 1 0.14423107706367883 0.0007045974986788797 0.003453682380949525 ['nc|ENSG00000064490|O14593-2|RFXANK', 'nc|ENSG00000064490|O14593-3|RFXANK', 'ENSG00000064490|ENST00000303088|RFXANK'] 48498 18830 KAIDVVVMV True PC9_epitope_Rep1 972.5677890483199 972.56668993586 77.216 2 0.14422505519441706 0.0007045974986788797 0.0034541613747581016 ['nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1', 'ENSG00000204104|ENST00000373327|TRAF3IP1'] 28893 16753 FTDESYLELY True H1975_Epitope_Rep3 1278.5655996885 1278.5650749679298 69.975 1 0.14422019118534626 0.0007045974986788797 0.0034545483177826596 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 10064 10868 AYSSYVHQY True PC9_epitope_Rep3 1116.48762415132 1116.48652993586 46.781 2 0.1442118339125125 0.0007045974986788797 0.003455213258449774 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 17388 12664 EHDPQYAVI True PC9_epitope_Rep1 1070.50327421546 1070.5021699358601 53.583 2 0.14420574595272043 0.0007045974986788797 0.003455697722813108 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 31875 10847 GELLFVHSA True H1975_Epitope_Rep1 971.50763131991 971.50652993586 46.682 2 0.1442035765228704 0.0007045974986788797 0.003455870376829193 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 96918 12337 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 52.311 2 0.14420311202115985 0.0007045974986788797 0.003455907345298872 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 115433 20864 TRLSNIFVI True PC9_epitope_Rep5 1061.62332977849 1061.62222993586 85.305 2 0.14419912132960896 0.0007045974986788797 0.0034562249701285733 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF'] 137455 13772 YEDSGIPLP True H1975_Epitope_Rep1 989.4705771048499 989.47002496793 58.117 1 0.14419765379845392 0.0007045974986788797 0.003456341780316664 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 109725 3585 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 18.693 2 0.14419503181548754 0.0007045974986788797 0.0034565504904670733 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 91822 4668 RKKAQEVLL True NCI_RA007_Epitope_Rep4 1083.6764279805097 1083.6753299358602 24.378 2 0.14419140120755514 0.0007045974986788797 0.0034568395079487067 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 132758 9578 VVINYSIVK True NCI_RA007_Epitope_Rep3 1033.6171817688898 1033.6160899358601 44.76 2 0.1441867055653214 0.0007045974986788797 0.0034572133439433237 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 64971 11620 LQFDKAINA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 55.819 2 0.1441844862231086 0.0007045974986788797 0.003457390047273042 ['ENSG00000140307|ENST00000396060|GTF2A2'] 77387 9481 NSEPETLEY True H1975_Epitope_Rep3 1080.46113461996 1080.46057496793 41.473 1 0.14417074546128314 0.0007045974986788797 0.0034584842821233073 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 47218 20158 IVAPGTFEV True PC9_epitope_Rep1 931.5014833103099 931.50038993586 82.367 2 0.14416896589820252 0.0007045974986788797 0.0034586260213962917 ['ENSG00000143621|ENST00000361891|ILF2'] 88167 17872 QRVEDAFYTL True PC9_epitope_Rep4 1240.6088019131596 1240.6077099358602 76.784 2 0.144167417194471 0.0007045974986788797 0.003458749377796949 ['nc|ENSG00000133703|P01116|KRAS'] 47820 19781 IYGSVWEKL True PC9_epitope_Rep1 1093.58079626017 1093.5796899358602 80.911 2 0.14416637213759045 0.0007045974986788797 0.003458832620496405 ['ENSG00000156671|ENST00000542569|SAMD8', 'nc|ENSG00000156671|Q96LT4-2|SAMD8'] 103923 11492 SQANIAQVL True NCI_RA007_Epitope_Rep3 942.5134449763399 942.51234993586 52.316 2 0.14416387519216853 0.0007045974986788797 0.003459031519619375 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 105594 9413 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep3 1071.45427579815 1071.45377496793 41.209 1 0.1441588462823522 0.0007045974986788797 0.0034594321418497894 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 138616 9678 YIDSKFEDY True H1975_Epitope_Rep1 1178.5131701928199 1178.5120699358602 42.151 2 0.14415786855561494 0.0007045974986788797 0.00345951003665962 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 71690 10376 MEDEVVRFA True H1975_Epitope_Rep2 1094.5066453437398 1094.50554993586 44.922 2 0.1441575609457491 0.0007045974986788797 0.0034595345440841404 ['ENST00000521086.6_1_8:54915649-54934685:-|nuORF', 'nc|ENSG00000187735|P23193-2|TCEA1', 'ENSG00000187735|ENST00000521604|TCEA1'] 42443 7988 IEDVPAPST True H1975_Epitope_Rep2 927.45492704071 927.4543749679301 35.675 1 0.14415546217205216 0.0007045974986788797 0.0034597017589858533 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF'] 9628 19256 AYANIISQF True PC9_epitope_Rep6 1025.5181960036098 1025.51767496793 86.718 1 0.1441546786121055 0.0007045974986788797 0.0034597641893558254 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 9032 12553 AVHDSFVAV True PC9_epitope_Rep5 943.4763311916299 943.4752299358599 53.285 2 0.1441508223963284 0.0007045974986788797 0.003460071450789044 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 140557 18656 YRPPELLL True PC9_epitope_Rep4 999.5753169569099 999.57420993586 79.838 2 0.14414839282834374 0.0007045974986788797 0.00346026505152325 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 125875 7568 VLAPPQEELSK True NCI_RA007_Epitope_Rep5 1209.6605031328497 1209.6594099358601 35.795 2 0.14414830769561787 0.0007045974986788797 0.0034602718355409533 ['CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 41125 15658 HTVGELIEV True PC9_epitope_Rep4 995.5287606873098 995.52766993586 68.155 2 0.1441427942617642 0.0007045974986788797 0.0034607112156660323 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 109762 9085 TEDPNQLTV True H1975_Epitope_Rep3 1015.4822044177099 1015.48110993586 39.933 2 0.14414229197451447 0.0007045974986788797 0.0034607512470192264 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 100732 11004 SLDVGGPLRY True H1975_Epitope_Rep2 1075.56620882519 1075.5651099358602 47.354 2 0.14414081426291717 0.0007045974986788797 0.003460869020533042 ['ENSG00000176894|ENST00000317479|PXMP2'] 1593 5504 AEFAERTVA True NCI_RA007_Epitope_Rep3 992.4927095317599 992.49160993586 28.651 2 0.14413984733882468 0.0007045974986788797 0.0034609460864719523 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 35461 7480 GSHSMRYFYT True NCI_RA007_Epitope_Rep4 1247.5393424543497 1247.5382499358602 35.417 2 0.14413612472739346 0.0007045974986788797 0.0034612428025569447 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 39098 9604 HHVEPLERL True PC9_epitope_Rep5 1128.60399131624 1128.60235490379 41.904 3 0.14413043722657928 0.0007045974986788797 0.003461696181756586 ['ENSG00000149257|ENST00000358171|SERPINH1'] 29414 17057 FVDRGFYSV True PC9_epitope_Rep3 1088.52909504048 1088.5279899358602 70.762 2 0.1441241676252707 0.0007045974986788797 0.0034621960314496305 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 23837 16378 EYIKFLRSI True PC9_epitope_Rep6 1167.6651945904698 1167.6640899358601 75.386 2 0.14412183915804075 0.0007045974986788797 0.0034623816888811375 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 135410 14192 WHHTFYNEL True PC9_epitope_Rep2 1245.55670677065 1245.55560993586 59.857 2 0.14412036525579122 0.0007045974986788797 0.003462499213749642 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 96654 6976 SAINEVVTR True PC9_epitope_Rep6 987.53490869691 987.53380993586 35.8 2 0.14411846162273928 0.0007045974986788797 0.0034626510100208624 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 2227 11637 AEMSTPLSV True H1975_Epitope_Rep3 933.44773348529 933.4471849679301 49.897 1 0.14411813719237918 0.0007045974986788797 0.00346267688085438 ['ENSG00000137275|ENST00000259808|RIPK1'] 2920 4868 AEYNGRLAA True NCI_RA007_Epitope_Rep3 963.4773938207899 963.47628993586 26.133 2 0.14411659335071417 0.0007045974986788797 0.0034627999930194127 ['ENSG00000101413|ENST00000373433|RPRD1B'] 114605 8181 TQDPTVTRL True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 36.824 2 0.1441147041696049 0.0007045974986788797 0.0034629506498600506 ['ENSG00000130827|ENST00000369682|PLXNA3'] 49351 7100 KESEMNVIAA True H1975_Epitope_Rep2 1090.5328600915798 1090.5317699358602 32.24 2 0.1441088566097017 0.0007045974986788797 0.003463417017454517 ['ENSG00000148411|ENST00000277554|NACC2'] 128052 9749 VPKNSDPWAA True PC9_epitope_Rep5 1083.53490869691 1083.53380993586 42.47 2 0.14410664846702723 0.0007045974986788797 0.0034635931423813446 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 75069 11229 NHVASDISL True PC9_epitope_Rep1 954.47705946762 954.47596993586 48.072 2 0.14410631699232954 0.0007045974986788797 0.0034636195820915575 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 107248 17558 SVKNGFLTI True PC9_epitope_Rep1 977.55458151233 977.55348993586 72.329 2 0.14410559588782038 0.0007045974986788797 0.0034636771008822367 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 129080 7294 VQPSKYHFL True NCI_RA007_Epitope_Rep3 1117.5920296502102 1117.59092993586 35.8 2 0.14409255548078237 0.0007045974986788797 0.0034647174306618317 ['ENSG00000177383|ENST00000317897|MAGEF1'] 84170 22701 PYISNIYLI True PC9_epitope_Rep1 1094.60119735158 1094.60067496793 92.123 1 0.1440757426622358 0.0007045974986788797 0.0034660591716093258 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 46970 9879 ITPQTIHGV True PC9_epitope_Rep1 964.5341804209198 964.53308993586 42.857 2 0.14407397095499513 0.0007045974986788797 0.003466200592120791 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 64064 7827 LPASNLAGKEA True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 34.933 2 0.1440699714431844 0.0007045974986788797 0.0034665198606336238 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 90916 11588 REYPNLVTI True NCI_RA007_Epitope_Rep4 1103.59750895347 1103.59640993586 51.521 2 0.14405789213328757 0.0007045974986788797 0.0034674842914599185 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 93529 17108 RQLEEEGITFV True PC9_epitope_Rep4 1319.6721304457096 1319.6710299358601 73.81 2 0.14405441039641603 0.0007045974986788797 0.0034677623281993467 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 76721 16584 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53856993586 68.796 2 0.14405403282923937 0.0007045974986788797 0.0034677924804433504 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 1110 4934 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 24.061 1 0.14405259470890722 0.0007045974986788797 0.003467907330086529 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 62924 19771 LLPDLIQKV True PC9_epitope_Rep2 1037.6484818971699 1037.64738993586 81.436 2 0.14405255117718743 0.0007045974986788797 0.0034679108066295434 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 108226 22923 SYIALPLTL True PC9_epitope_Rep2 989.57973363101 989.57862993586 93.678 2 0.14405116556221906 0.0007045974986788797 0.003468021466828329 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 116571 19802 TTYEGIFKTL True PC9_epitope_Rep2 1171.6124903112698 1171.6113899358602 81.558 2 0.1440435917222534 0.0007045974986788797 0.0034686264029252533 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 48335 15316 IYSIDFTRF True NCI_RA007_Epitope_Rep4 1160.5866099165999 1160.58550993586 66.568 2 0.1440428664223869 0.0007045974986788797 0.003468684339416316 ['ENSG00000175970|ENST00000344651|UNC119B'] 15301 8932 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep1 1252.5506357944798 1252.5495299358602 39.198 2 0.14403260459691672 0.0007045974986788797 0.003469504150491364 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 7691 4462 ASLPSESNEPK True NCI_RA007_Epitope_Rep4 1157.5564319871298 1157.55532993586 23.539 2 0.14402928971745843 0.0007045974986788797 0.0034697690153380695 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP'] 104623 16759 SQSSLIHLV True PC9_epitope_Rep1 982.5447451046201 982.54364993586 69.288 2 0.1440218895994575 0.0007045974986788797 0.003470360370565116 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 103878 9985 SPYSGPKFNSA True PC9_epitope_Rep3 1153.54038800017 1153.53928993586 43.363 2 0.1440155487763947 0.0007045974986788797 0.003470867155469249 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 104823 8300 SRAETVAQL True PC9_epitope_Rep5 973.5192586327698 973.51816993586 36.864 2 0.14401029963611317 0.0007045974986788797 0.0034712867441583843 ['ENSG00000112812|ENST00000230582|PRSS16', 'ENST00000468138.5_1_6:27219498-27223091:+|nuORF'] 97511 4930 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 24.046 1 0.14400459581896471 0.0007045974986788797 0.0034717427344349646 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 31431 10029 GEAIDVYQA True H1975_Epitope_Rep2 964.45017601344 964.44962496793 43.569 1 0.14400181064455786 0.0007045974986788797 0.0034719654161413536 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3'] 33972 10452 GLSQSALPYR True PC9_epitope_Rep4 1090.5771078620598 1090.5760099358602 47.914 2 0.14399699895684578 0.0007045974986788797 0.0034723501561098797 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 124734 19055 VHAPPMQLGF True PC9_epitope_Rep3 1095.5535359665098 1095.5524299358601 78.517 2 0.14399686672286668 0.0007045974986788797 0.003472360730065677 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 61295 11577 LIQDRVAEV True PC9_epitope_Rep1 1041.5818588893299 1041.5807699358602 49.409 2 0.1439958260538614 0.0007045974986788797 0.003472443947221561 ['ENSG00000196878|ENST00000356082|LAMB3'] 95930 7844 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.6154299358602 36.87 2 0.14398673454449565 0.0007045974986788797 0.0034731710345195076 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 99604 4425 SIFEPAKGGEK True NCI_RA007_Epitope_Rep5 1161.6029882567298 1161.60133490379 23.654 3 0.1439841441932736 0.0007045974986788797 0.0034733782237766518 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 75178 10966 NHYTESISV True PC9_epitope_Rep5 1048.48253877088 1048.4814499358602 47.169 2 0.14398038208784641 0.0007045974986788797 0.0034736791576593967 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31827498-31827900:-|nuORF'] 8777 19053 AVDLTLPKV True PC9_epitope_Rep3 954.57498260374 954.57388993586 78.51 2 0.14397940361769415 0.0007045974986788797 0.0034737574305280876 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 52841 12340 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 52.495 2 0.14397940300418838 0.0007045974986788797 0.0034737574796061296 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 114965 18658 TQWDFPVEL True NCI_RA007_Epitope_Rep3 1133.53932537101 1133.53822993586 81.626 2 0.1439793702660916 0.0007045974986788797 0.0034737600985254827 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant', 'ENST00000504526.1_1_4:184580477-184587420:+|nuORF', 'TRAPPC11|p.K361Efs*9|1|0.24|ENSG00000168538|chr4:183680232-183680233|-/G|frameshift_variant'] 48401 8593 IYTSSVNRL True PC9_epitope_Rep6 1051.56620882519 1051.5651099358602 42.859 2 0.1439780877309783 0.0007045974986788797 0.003473862697847833 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 77508 13983 NTDFGDEFY True H1975_Epitope_Rep3 1106.4192698079798 1106.41816993586 59.104 2 0.14397646785529547 0.0007045974986788797 0.003473992287799477 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 109837 12303 TEELAYLK True PC9_epitope_Rep3 965.50696261357 965.50586993586 52.348 2 0.14397343977030375 0.0007045974986788797 0.0034742345472817066 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 8016 15444 ATDLDVANFY True H1975_Epitope_Rep2 1127.51350454599 1127.51297496793 64.561 1 0.14396453552768163 0.0007045974986788797 0.003474947021192839 ['ENSG00000142252|ENST00000270257|GEMIN7'] 140952 10055 YSEVYPGQQY True H1975_Epitope_Rep3 1232.5349682665599 1232.53437496793 43.713 1 0.14396405057146933 0.0007045974986788797 0.0034749858291814855 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 27651 19423 FPFAPPAAA True PC9_epitope_Rep4 887.4541391950698 887.45359496793 82.823 1 0.14395903883690714 0.0007045974986788797 0.0034753869119145864 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 95889 7130 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60750490379 34.103 3 0.143953689061623 0.0007045974986788797 0.0034758150983447544 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 71324 22966 LYQFNPAFF True PC9_epitope_Rep5 1145.5545815123298 1145.5540749679299 93.328 1 0.14395188034231346 0.0007045974986788797 0.003475959876848393 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 68361 14396 LTEPTGLLY True H1975_Epitope_Rep2 1005.5382627418498 1005.53767496793 60.523 1 0.14395092695058168 0.0007045974986788797 0.0034760361932713755 ['ENSG00000168758|ENST00000305476|SEMA4C'] 138501 14544 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 60.943 2 0.1439405055137286 0.0007045974986788797 0.0034768705095447774 ['ENSG00000115306|ENST00000356805|SPTBN1'] 126045 16599 VLEDTENWLY True H1975_Epitope_Rep2 1280.59248314268 1280.5913899358602 69.074 2 0.14394041296941196 0.0007045974986788797 0.003476877919320743 ['ENSG00000164070|ENST00000296464|HSPA4L'] 117968 10447 TYAPAIHQI True PC9_epitope_Rep6 1012.5341804209202 1012.53308993586 50.937 2 0.14393760508401038 0.0007045974986788797 0.0034771027466526617 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 54423 13206 KYFLWEEKF True NCI_RA007_Epitope_Rep4 1288.6492101731599 1288.64810993586 57.92 2 0.14393688725027953 0.0007045974986788797 0.003477160225903361 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 76917 18863 NRDPILVSL True PC9_epitope_Rep3 1025.58694426977 1025.58584993586 77.78 2 0.14392264782970987 0.0007045974986788797 0.003478300617036743 ['ENSG00000106789|ENST00000375077|CORO2A'] 48928 6932 KEEEAGGFIA True H1975_Epitope_Rep2 1049.5029398622898 1049.50184993586 31.585 2 0.14391886364158396 0.0007045974986788797 0.0034786037434181775 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 2494 3927 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 20.158 2 0.14391808499438086 0.0007045974986788797 0.003478666118970321 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 35893 4645 GTNPGIITK True NCI_RA007_Epitope_Rep4 899.50763131991 899.50652993586 24.284 2 0.1439090097751074 0.0007045974986788797 0.0034793931948476167 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 131707 12880 VTNSVFHEI True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 57.419 2 0.14390491776756467 0.0007045974986788797 0.0034797210820152777 ['nc|ENSG00000074416|Q99685-2|MGLL', 'nc|ENSG00000074416|Q99685|MGLL', 'ENSG00000074416|ENST00000265052|MGLL'] 120593 6839 VEHGSVALP True H1975_Epitope_Rep2 907.4763311916299 907.4752299358599 31.222 2 0.1438976080034067 0.0007045974986788797 0.0034803068801431396 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 140294 9187 YRAQPSVSL True PC9_epitope_Rep6 1019.5399940773499 1019.53888993586 45.467 2 0.1438944134915967 0.0007045974986788797 0.003480562916284917 ['ENSG00000239306|ENST00000310137|RBM14'] 41429 11155 HYILHNSFF True NCI_RA007_Epitope_Rep5 1176.5716285587998 1176.5705299358601 49.543 2 0.14389415385383647 0.0007045974986788797 0.003480583726749833 ['ENSG00000163659|ENST00000295924|TIPARP'] 108928 11097 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53856993586 47.778 2 0.1438935605944591 0.0007045974986788797 0.0034806312780915546 ['ENSG00000183751|ENST00000568546|TBL3'] 74786 9569 NHDTALTL True PC9_epitope_Rep2 883.43994568291 883.43884993586 42.153 2 0.14389217566194837 0.0007045974986788797 0.003480742286684401 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 20823 10484 EQILEEFSK True H1975_Epitope_Rep1 1121.5604547384098 1121.5593499358602 45.282 2 0.143892142313978 0.0007045974986788797 0.003480744959718117 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 68170 5185 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 25.017 2 0.1438913805992246 0.0007045974986788797 0.0034808060161394447 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 115215 19688 TRDSTFVFM True PC9_epitope_Rep1 1102.5117307241799 1102.5106299358602 80.555 2 0.14388969993743747 0.0007045974986788797 0.003480940735940346 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 64094 22121 LPDIFEAQIA True PC9_epitope_Rep2 1115.58627556343 1115.5851699358602 90.564 2 0.14388807963362385 0.0007045974986788797 0.003481070622421932 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 137642 11591 YEIAEGISA True H1975_Epitope_Rep2 951.4549270407099 951.4543749679301 49.65 1 0.14388045723902787 0.0007045974986788797 0.003481681711924876 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 37106 11814 GVPSTAIREI True PC9_epitope_Rep4 1041.5818588893299 1041.5807699358602 53.21 2 0.14386992125762502 0.0007045974986788797 0.0034825265598889417 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 91687 4496 RKAALEQDL True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 24.522 2 0.14386848805029454 0.0007045974986788797 0.0034826415001083795 ['ENSG00000100292|ENST00000216117|HMOX1'] 93377 10896 RQADFVQVL True NCI_RA007_Epitope_Rep3 1074.5821932425 1074.58108993586 49.933 2 0.1438602541730932 0.0007045974986788797 0.0034833019127703336 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 21162 10902 ERDALNIET True PC9_epitope_Rep5 1059.51965255559 1059.5185499358602 46.922 2 0.14385263967468143 0.0007045974986788797 0.003483912757742982 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 97930 6065 SENEYIM[Oxidation]KA True H1975_Epitope_Rep3 1099.4855759264299 1099.48446993586 28.34 2 0.14384441959385147 0.0007045974986788797 0.0034845723027253817 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 85999 11623 QHLQATGVSL True PC9_epitope_Rep1 1052.56145779792 1052.56036993586 49.586 2 0.14384311827776045 0.0007045974986788797 0.003484676726265351 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 44028 19341 IIIPEIQKV True PC9_epitope_Rep1 1051.66413196131 1051.66302993586 79.201 2 0.14384211873562217 0.0007045974986788797 0.003484756936196703 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 104512 20432 SQNDGFFAV True PC9_epitope_Rep2 983.4348603024699 983.43431496793 84.019 1 0.143838038223605 0.0007045974986788797 0.003485084402731309 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 41524 11329 HYPLNTVTF True NCI_RA007_Epitope_Rep5 1090.54474510462 1090.54364993586 50.226 2 0.14383668000108893 0.0007045974986788797 0.003485193408678995 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 38065 11151 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.44900993586 48.219 2 0.14383172094177213 0.0007045974986788797 0.0034855914333037402 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 3285 4918 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 26.476 2 0.14382994535845106 0.0007045974986788797 0.0034857339563632334 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115259 10610 TREEGTPLTL True PC9_epitope_Rep6 1115.5822528121498 1115.5811499358601 51.631 2 0.14382854937091652 0.0007045974986788797 0.0034858460139766587 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 85917 13969 QHGGFVVTV True PC9_epitope_Rep5 942.4923156089399 942.49120993586 58.755 2 0.14382359640595652 0.0007045974986788797 0.0034862436233466902 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 118894 9534 VADGYPVRL True H1975_Epitope_Rep3 988.5341804209199 988.53308993586 41.68 2 0.14381761049002664 0.0007045974986788797 0.00348672421506828 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 115212 9365 TRDSNIIRL True PC9_epitope_Rep2 1086.61455599994 1086.6134499358602 41.357 2 0.14381238803663146 0.0007045974986788797 0.003487143564347746 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS'] 72870 11250 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45278993586 48.263 2 0.14381159643097605 0.0007045974986788797 0.003487207132571891 ['ENSG00000115233|ENST00000409682|PSMD14'] 65769 9980 LSDFFKTHY True H1975_Epitope_Rep2 1156.55530978832 1156.5536549037902 43.378 3 0.14380849626711723 0.0007045974986788797 0.003487456095775942 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57100225-57103093:-|nuORF'] 133127 21060 VVQPLLVSV True PC9_epitope_Rep3 952.5957180483199 952.59516496793 86.288 1 0.14380680349007074 0.0007045974986788797 0.003487592044168329 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 21161 10939 ERDALNIET True PC9_epitope_Rep1 1059.51965255559 1059.5185499358602 46.965 2 0.14380269337336746 0.0007045974986788797 0.0034879221531057946 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 40736 6607 HRTELETKL True PC9_epitope_Rep3 1125.61422164677 1125.61258490379 30.439 3 0.14380211813256683 0.0007045974986788797 0.003487968356733547 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 84896 10642 QEASEAYLV True H1975_Epitope_Rep3 1008.4763907612797 1008.47528993586 46.008 2 0.14380157870973453 0.0007045974986788797 0.0034880116839964112 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 49008 10933 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 50.089 2 0.14379029434282842 0.0007045974986788797 0.0034889181840612785 ['ENSG00000197747|ENST00000368811|S100A10'] 110222 6756 TEQPVTPEP True H1975_Epitope_Rep2 996.47639076128 996.47528993586 30.902 2 0.14378565889751915 0.0007045974986788797 0.0034892906282055114 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 105318 11190 SRPENAIIY True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 48.03 2 0.1437823923856668 0.0007045974986788797 0.0034895531063600126 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 31766 10164 GEHTLLVTV True NCI_RA007_Epitope_Rep5 967.5338460677499 967.53274993586 45.73 2 0.14377628558605368 0.0007045974986788797 0.0034900438663371287 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 1481 7394 AEEIPSRIQA True H1975_Epitope_Rep2 1112.58258716532 1112.5814899358602 33.383 2 0.14377196134592457 0.0007045974986788797 0.0034903914161547697 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 54756 11987 KYNANFVTF True NCI_RA007_Epitope_Rep1 1102.54474510462 1102.54364993586 50.613 2 0.14375174024356283 0.0007045974986788797 0.0034920170920646094 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 85822 14891 QHEEFVTSL True PC9_epitope_Rep3 1088.51383889916 1088.51274993586 62.414 2 0.14375028217206387 0.0007045974986788797 0.003492134342807737 ['ENSG00000085872|ENST00000546361|CHERP'] 13283 16835 DLTEYLSR True PC9_epitope_Rep4 995.49237517859 995.49126993586 72.733 2 0.14374871134373324 0.0007045974986788797 0.0034922606652599796 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 132245 15214 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 70.616 2 0.14373965907824143 0.0007045974986788797 0.0034929887163439896 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 88574 6290 QTDKLKELY True H1975_Epitope_Rep2 1136.6077392839998 1136.6060849037901 29.136 3 0.14373949021294477 0.0007045974986788797 0.003493002299189535 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 118170 15631 TYIQKIFRM True PC9_epitope_Rep6 1198.65325000778 1198.65160490379 72.326 3 0.14373313104837515 0.0007045974986788797 0.003493513842998458 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 35290 17319 GRHGVFLEL True PC9_epitope_Rep3 1026.5610638750998 1026.5599699358602 71.793 2 0.1437299527902498 0.0007045974986788797 0.003493769536264174 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 135083 7428 WEDEGVRAC True H1975_Epitope_Rep2 1063.4392940599098 1063.43818993586 33.517 2 0.14372911912751274 0.0007045974986788797 0.003493836608137128 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 106383 9290 STIEYVIQR True NCI_RA007_Epitope_Rep2 1107.59242357303 1107.5913299358601 40.745 2 0.14372849256529716 0.0007045974986788797 0.003493887018694118 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 111328 11662 THNIIVNQL True PC9_epitope_Rep6 1050.5821932425 1050.58108993586 55.985 2 0.14372837529162452 0.0007045974986788797 0.0034938964541201406 ['ENSG00000198356|ENST00000357332|GET3'] 8127 13681 ATEFIMNEY True H1975_Epitope_Rep1 1116.47976188956 1116.47917496793 57.759 1 0.14372766763713585 0.0007045974986788797 0.003493953390041047 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 105836 5139 SSLNLRET True NCI_RA007_Epitope_Rep3 918.47705946762 918.47596993586 27.208 2 0.1437272688757428 0.0007045974986788797 0.0034939854736845367 ['ENSG00000026025|ENST00000544301|VIM'] 8349 9236 ATLAAVLQR True NCI_RA007_Epitope_Rep5 941.56581490237 941.56470993586 42.176 2 0.14370519247183025 0.0007045974986788797 0.003495762158976973 ['ENSG00000159399|ENST00000290573|HK2'] 39120 15166 HHYEGAVVIL True PC9_epitope_Rep3 1136.5978433066398 1136.5961849037901 63.479 3 0.1437037658728755 0.0007045974986788797 0.0034958770009828367 ['ENSG00000163655|ENST00000496455|GMPS'] 104135 2536 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 14.686 2 0.1437005582787213 0.0007045974986788797 0.003496135227769384 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 76924 10269 NRDQYSHLL True PC9_epitope_Rep1 1144.56252042708 1144.56088490379 44.385 3 0.14368955606895173 0.0007045974986788797 0.003497021102580349 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 136279 11888 WSEEASGITY True H1975_Epitope_Rep2 1141.49276910141 1141.49166993586 50.807 2 0.14368786830326666 0.0007045974986788797 0.0034971570176433953 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'IL6ST-ANKRD55|1|fusion', 'IL6ST-ANKRD55|2|fusion', 'ENST00000506241.1_1_5:55251841-55256299:-|nuORF', 'nc|ENSG00000134352|P40189-2|IL6ST'] 97609 9849 SEEWADNHLP True H1975_Epitope_Rep2 1196.50981614788 1196.50870993586 42.87 2 0.14368649326589017 0.0007045974986788797 0.00349726775270425 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 31762 10345 GEHTLLVTV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 44.8 2 0.14368645795598098 0.0007045974986788797 0.003497270596341854 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 98018 11297 SEQFETVAV True H1975_Epitope_Rep2 1008.4763907612798 1008.47528993586 48.501 2 0.14368396979760228 0.0007045974986788797 0.0034974709827210893 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 100875 4369 SLESINSR True NCI_RA007_Epitope_Rep5 904.46140940348 904.46030993586 23.422 2 0.14367705656316732 0.0007045974986788797 0.0034980278069709284 ['ENSG00000156482|ENST00000287038|RPL30'] 60544 15524 LHDSSDYLL True PC9_epitope_Rep1 1061.50293986229 1061.50184993586 64.536 2 0.14367326919889972 0.0007045974986788797 0.003498332896331329 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000482825.7_1_1:150939531-150940017:-|nuORF', 'ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF', 'SPEN-CERS4|1|fusion', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF'] 140970 7139 YSFTTTAER True NCI_RA007_Epitope_Rep2 1074.49818883502 1074.49708993586 32.39 2 0.14367120139341363 0.0007045974986788797 0.003498499478587317 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 68634 22786 LTIEDGIFEV True PC9_epitope_Rep3 1134.58085582982 1134.57974993586 92.917 2 0.14367058787867532 0.0007045974986788797 0.0034985489048040387 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 90314 4991 REEYQPATP True H1975_Epitope_Rep3 1089.5090878718897 1089.50798993586 24.327 2 0.14365794626458903 0.0007045974986788797 0.0034995674978594853 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000505521.1_1_5:177019550-177020791:+|nuORF', 'ENST00000507723.1_1_5:177019275-177020791:+|nuORF'] 97589 7885 SEETPLTAA True H1975_Epitope_Rep3 917.4341915961298 917.43364496793 35.305 1 0.1436560504548748 0.0007045974986788797 0.0034997202773663174 ['ENSG00000182154|ENST00000371443|MRPL41'] 9807 13775 AYLEAHETF True PC9_epitope_Rep1 1079.4923751785898 1079.4912699358601 57.832 2 0.1436440671727604 0.0007045974986788797 0.0035006861393086747 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 115044 15040 TRDAGYGGLSL True PC9_epitope_Rep5 1108.5512870370399 1108.55018993586 62.855 2 0.14364093124203908 0.0007045974986788797 0.0035009389414772194 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 41863 11132 IAYSRPVYF True H1975_Epitope_Rep2 1114.5811306133398 1114.58002993586 47.855 2 0.14363394977697544 0.0007045974986788797 0.003501501815410548 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 40171 18116 HQDSTWIVL True PC9_epitope_Rep6 1097.55055876105 1097.54946993586 82.318 2 0.14363377580798908 0.0007045974986788797 0.0035015158426408254 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 89694 10599 RAAEEFVNV True PC9_epitope_Rep6 1033.5192586327698 1033.5181699358602 51.588 2 0.14363046396186557 0.0007045974986788797 0.0035017828895468595 ['ENSG00000132661|ENST00000254998|NXT1'] 127299 15252 VMDEEAYVLY True H1975_Epitope_Rep2 1230.54784144938 1230.5467499358601 63.824 2 0.14362983905251556 0.0007045974986788797 0.0035018332806619366 ['ENSG00000105447|ENST00000253237|GRWD1', 'ENST00000599949.1_1_19:48949262-48949505:+|nuORF'] 137227 11252 YAYTGRLEL True H1975_Epitope_Rep2 1084.5553097883198 1084.5542099358602 48.324 2 0.1436289784164461 0.0007045974986788797 0.003501902681364206 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 48067 23174 IYMDTLNIF True PC9_epitope_Rep3 1128.5525329069999 1128.5514299358601 94.409 2 0.1436286552471446 0.0007045974986788797 0.003501928741717469 ['ENSG00000165678|ENST00000372134|GHITM'] 132321 5445 VTYHMFRTK True NCI_RA007_Epitope_Rep4 1181.6015487880898 1181.59990490379 27.524 3 0.1436221188594679 0.0007045974986788797 0.003502455876967604 ['ENST00000453465.1_1_10:21915067-21915193:-|nuORF', 'ENST00000478691.5_1_1:23664326-23665089:-|nuORF'] 130919 9811 VTDESIPSY True H1975_Epitope_Rep3 1009.4604063439699 1009.4598749679301 42.764 1 0.143620643350917 0.0007045974986788797 0.0035025748821200017 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant'] 108792 13386 SYTRLFSNF True NCI_RA007_Epitope_Rep5 1133.5505587610498 1133.54946993586 58.176 2 0.14361702894750764 0.0007045974986788797 0.003502866413916075 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 107228 20062 SVITQVFHV True PC9_epitope_Rep2 1028.5654805492 1028.5643899358602 82.574 2 0.14361456895353814 0.0007045974986788797 0.0035030648467368093 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 8546 8634 ATVAVPLVGK True NCI_RA007_Epitope_Rep3 953.5909670210499 953.58986993586 41.036 2 0.14360793598959168 0.0007045974986788797 0.0035035999434035723 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 119693 15156 VAVPLYDTL True NCI_RA007_Epitope_Rep3 989.54334812229 989.54224993586 67.135 2 0.1436054441015999 0.0007045974986788797 0.0035038009907888473 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 65803 12562 LSDISVVSNY True H1975_Epitope_Rep1 1095.54480467427 1095.54427496793 53.364 1 0.14359931620807337 0.0007045974986788797 0.0035042954425392146 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 62077 7347 LLDVRDRDSY True H1975_Epitope_Rep2 1250.62551460646 1250.62387490379 33.2 3 0.14359587726476591 0.0007045974986788797 0.0035045729567463797 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 8415 10353 ATLTNILEH True NCI_RA007_Epitope_Rep3 1010.53965972418 1010.53856993586 47.787 2 0.14359183581622081 0.0007045974986788797 0.0035048991195244443 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'NLRC5|p.L1674Rfs*17|1|0.22|ENSG00000140853|chr16:57077960-57077960|T/-|frameshift_variant', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'nc|ENSG00000140853|Q86WI3-3|NLRC5', 'NLRC5|p.Q955Rfs*20|1|0.43|ENSG00000140853|chr16:57039835-57039835|G/-|frameshift_variant'] 77835 5785 NVDPVQHTY True H1975_Epitope_Rep3 1071.4985231881901 1071.49742993586 27.277 2 0.14359170162140097 0.0007045974986788797 0.003504909950157109 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 7480 9198 ASDAAPLQY True H1975_Epitope_Rep3 934.43961132974 934.4390649679301 40.372 1 0.14358924211295293 0.0007045974986788797 0.0035051084587315383 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 4052 4604 AHIPKSDAL True PC9_epitope_Rep4 950.5185303567799 950.51742993586 24.215 2 0.14358421534122429 0.0007045974986788797 0.003505514207568426 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 76579 9648 NQLIRTSGV True PC9_epitope_Rep3 986.55089311422 986.54978993586 42.059 2 0.1435821505575166 0.0007045974986788797 0.003505680885419278 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 9735 21603 AYGSLFNTI True PC9_epitope_Rep1 984.4916469026 984.49054993586 87.919 2 0.1435818876476362 0.0007045974986788797 0.0035057021091531465 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 118911 10120 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47528993586 43.923 2 0.14358022413332255 0.0007045974986788797 0.0035058364014154196 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 118255 18574 TYLEKFQNL True PC9_epitope_Rep1 1154.5971746002997 1154.5960699358602 76.232 2 0.14358005226204462 0.0007045974986788797 0.003505850276539205 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 88539 5424 QTATQLLK True NCI_RA007_Epitope_Rep5 901.5232813840499 901.52218993586 27.552 2 0.14357699930366477 0.0007045974986788797 0.0035060967501652092 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000485706.5_1_9:136216467-136216912:+|nuORF', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF', 'ENST00000437848.1_1_1:46117146-46117242:-|nuORF', 'ENST00000424559.2_1_22:19780074-19780431:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 39070 20319 HHSSVIFIF True PC9_epitope_Rep1 1085.56581490237 1085.56470993586 82.986 2 0.14356573268510842 0.0007045974986788797 0.0035070064838073852 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 119747 15462 VAYEEFEKV True PC9_epitope_Rep3 1112.5389910178399 1112.5378899358602 64.626 2 0.1435649936701206 0.0007045974986788797 0.0035070661644531547 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 75149 6535 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59691490379 30.551 3 0.14356236231002054 0.0007045974986788797 0.003507278673432489 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 40844 6478 HSDTDALGY True H1975_Epitope_Rep2 977.4090394774498 977.40794993586 29.835 2 0.14356165407456725 0.0007045974986788797 0.0035073358728022145 ['ENSG00000163898|ENST00000296252|LIPH'] 54326 9514 KYDPNVYSI True NCI_RA007_Epitope_Rep5 1097.53932537101 1097.53822993586 43.23 2 0.14355844868122472 0.0007045974986788797 0.003507594762245026 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 90288 9616 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 41.966 2 0.14355826497502128 0.0007045974986788797 0.003507609600186642 ['ENSG00000130255|ENST00000347512|RPL36'] 26200 19880 FHDHALMIIF True PC9_epitope_Rep4 1242.6219498795 1242.6208499358602 84.6 2 0.14355669545132896 0.0007045974986788797 0.003507736373083946 ['ENSG00000198712|ENST00000361739|MT-CO2'] 73093 21829 MRFLAATFL True PC9_epitope_Rep3 1068.57902243836 1068.57792993586 89.265 2 0.14355521219576925 0.0007045974986788797 0.0035078561821495135 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 130432 12385 VSMLNVYLK True NCI_RA007_Epitope_Rep4 1065.58925276889 1065.5881499358602 54.635 2 0.14354612954988466 0.0007045974986788797 0.0035085899159652038 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 89534 20600 QYLQDAYSF True PC9_epitope_Rep1 1133.5029398622898 1133.5023749679299 84.053 1 0.14354566455181367 0.0007045974986788797 0.0035086274845386014 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 4771 17053 ALDSTNVEL True PC9_epitope_Rep3 960.47639076128 960.47528993586 70.747 2 0.14354311175801404 0.0007045974986788797 0.00350883373943678 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 92716 5244 RNVSTGDVNV True NCI_RA007_Epitope_Rep4 1059.53088594563 1059.5297899358602 26.711 2 0.14353917100033764 0.0007045974986788797 0.0035091521595576945 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 99395 18685 SHVDLVVMV True PC9_epitope_Rep2 997.52665251233 997.52554993586 77.24 2 0.1435386660996511 0.0007045974986788797 0.0035091929584906427 ['ENSG00000031698|ENST00000234677|SARS1'] 131652 6904 VTLTSEEEAR True PC9_epitope_Rep5 1133.5564319871298 1133.55532993586 31.526 2 0.14353774536859482 0.0007045974986788797 0.003509267360165715 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 91044 22118 RFLAATFLL True PC9_epitope_Rep5 1050.6226015025 1050.62150993586 90.111 2 0.14353519913613336 0.0007045974986788797 0.0035094731221710523 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 93056 8517 RPNDIM[Oxidation]AEV True PC9_epitope_Rep3 1059.50189469691 1059.5007899358602 37.718 2 0.14353235772632023 0.0007045974986788797 0.003509702751711516 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 3901 17007 AHDDAIWSV True PC9_epitope_Rep1 1012.46140940348 1012.46030993586 70.24 2 0.14353234529584785 0.0007045974986788797 0.0035097037563173155 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 91655 15513 RISLPLPNF True NCI_RA007_Epitope_Rep4 1055.61276509479 1055.6116699358602 67.377 2 0.14352182944981864 0.0007045974986788797 0.0035105537281555476 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 92181 7427 RLFVGSIPK True NCI_RA007_Epitope_Rep3 1015.6178504752298 1015.61674993586 36.339 2 0.1435172700104887 0.0007045974986788797 0.0035109223207456354 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 90980 10929 RFEEAHFTF True NCI_RA007_Epitope_Rep2 1182.5458077337796 1182.54470993586 47.118 2 0.14350752481113122 0.0007045974986788797 0.003511710267558641 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 32081 6149 GESPVDYDGGR True NCI_RA007_Epitope_Rep1 1150.4890807032998 1150.48798993586 27.956 2 0.14350406070189903 0.0007045974986788797 0.003511990399950941 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 107200 13984 SVIPQIQKV True PC9_epitope_Rep2 1010.6124307416198 1010.61132993586 59.062 2 0.14349490631057446 0.0007045974986788797 0.0035127307956211193 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 78073 21645 NVVEQFLQA True PC9_epitope_Rep3 1046.53965972418 1046.53856993586 88.556 2 0.14349425008949845 0.0007045974986788797 0.003512783875909677 ['ENSG00000121060|ENST00000316881|TRIM25'] 67414 6308 LSSPATLNSR True PC9_epitope_Rep4 1044.5563724174801 1044.55526993586 31.323 2 0.14349074110971857 0.0007045974986788797 0.00351306772312908 ['CON__P00761'] 73327 9471 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4684899358601 41.348 2 0.14348512038391348 0.0007045974986788797 0.003513522440454906 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 132470 14434 VVDEIFNEY True H1975_Epitope_Rep3 1126.51825557326 1126.51714993586 60.875 2 0.1434778938958877 0.0007045974986788797 0.003514107149980319 ['ENSG00000100220|ENST00000216038|RTCB'] 23943 19342 EYLLKVNEI True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 79.204 2 0.14347743346650074 0.0007045974986788797 0.0035141444075117638 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 111413 10653 THSLTTPVV True PC9_epitope_Rep1 953.51819600361 953.51708993586 45.868 2 0.14346888216382753 0.0007045974986788797 0.0035148364425103937 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 7810 10769 ASVFGTMPLK True NCI_RA007_Epitope_Rep3 1049.5579526406098 1049.55684993586 49.404 2 0.14345683300296286 0.0007045974986788797 0.003515811779851084 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 76694 19259 NQSGQVFGL True PC9_epitope_Rep5 948.4664947839199 948.46538993586 79.121 2 0.14345184886696438 0.0007045974986788797 0.003516215306750711 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 45866 12124 ISDRLIGIY True H1975_Epitope_Rep3 1048.59169529704 1048.5905899358602 51.802 2 0.1434426932967044 0.0007045974986788797 0.0035169566822005425 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 90062 5114 READPQLGP True H1975_Epitope_Rep2 981.4879585044898 981.48686993586 24.752 2 0.14344105071099825 0.0007045974986788797 0.00351708970756097 ['nc|ENSG00000010803|Q96GD3-3|SCMH1', 'nc|ENSG00000010803|Q96GD3|SCMH1', 'ENSG00000010803|ENST00000695335|SCMH1', 'nc|ENSG00000010803|Q96GD3-6|SCMH1', 'nc|ENSG00000010803|Q96GD3-5|SCMH1', 'nc|ENSG00000010803|Q96GD3-4|SCMH1', 'nc|ENSG00000010803|Q96GD3-2|SCMH1'] 39297 18707 HIPDVITYL True PC9_epitope_Rep6 1069.58079626017 1069.5796899358602 84.6 2 0.14343983495935042 0.0007045974986788797 0.00351718816883738 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 24217 4771 EYSKQMQRF True NCI_RA007_Epitope_Rep3 1215.57064258263 1215.56899490379 25.73 3 0.14343550331808586 0.0007045974986788797 0.0035175390019816064 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 40675 10081 HRQTEVFTL True PC9_epitope_Rep6 1129.58800689893 1129.5869099358601 49.376 2 0.14343465470039393 0.0007045974986788797 0.003517607738246815 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 53225 7049 KQFEKQVEL True PC9_epitope_Rep2 1147.6237237013097 1147.62208490379 32.512 3 0.14342349551629802 0.0007045974986788797 0.0035185117329843045 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 104409 19286 SQLDVPFKV True PC9_epitope_Rep5 1031.56514619603 1031.56404993586 79.227 2 0.1434197373637168 0.0007045974986788797 0.003518816229214505 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 110306 7378 TESSWHEIA True H1975_Epitope_Rep3 1058.4668887067398 1058.4657899358601 33.357 2 0.14341889992218987 0.0007045974986788797 0.0035188840846774538 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 121790 11035 VFPDKGYSF True NCI_RA007_Epitope_Rep4 1058.5072969667401 1058.5061899358602 49.318 2 0.1434168028125247 0.0007045974986788797 0.0035190540131034053 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 15036 11993 DYMKTTSNF True PC9_epitope_Rep2 1105.47501086229 1105.47390993586 51.449 2 0.1434087463627848 0.0007045974986788797 0.0035197069015739744 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 15083 20967 DYSSILQKF True PC9_epitope_Rep5 1099.55497543515 1099.55447496793 85.711 1 0.14340605094249756 0.0007045974986788797 0.003519925363200877 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 134392 19370 VYPGDPLRF True PC9_epitope_Rep3 1062.5498304850598 1062.5487299358601 79.73 2 0.14340429477449287 0.0007045974986788797 0.003520067706435186 ['ENSG00000170892|ENST00000396388|TSEN34'] 73534 14992 MVPEDVPRL True PC9_epitope_Rep4 1054.5481162329 1054.5470099358602 65.605 2 0.14340381307068276 0.0007045974986788797 0.0035201067511234346 ['ENSG00000272333|ENST00000420124|KMT2B'] 111316 13042 THMTAIVGM True PC9_epitope_Rep4 959.4568587003499 959.45576993586 58.06 2 0.14339072443483628 0.0007045974986788797 0.0035211678201307584 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 91357 12400 RHADLEIRL True PC9_epitope_Rep5 1121.63054041725 1121.62944993586 52.694 2 0.14338654812159304 0.0007045974986788797 0.0035215064521446444 ['ENSG00000013364|ENST00000357402|MVP', 'ENST00000565830.5_1_16:29841852-29843003:+|nuORF'] 141160 7280 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.41776993586 32.94 2 0.14338161453445275 0.0007045974986788797 0.003521906528581606 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 85900 20034 QHFNGLLEI True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 82.31 2 0.14337914419149883 0.0007045974986788797 0.0035221068715820193 ['nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 4696 16595 ALATLIHQV True PC9_epitope_Rep1 964.5705659296401 964.56946993586 68.657 2 0.14337848843811468 0.0007045974986788797 0.0035221600546004603 ['ENSG00000111652|ENST00000543155|COPS7A'] 115724 8254 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.5853349679301 38.428 1 0.14337373813016424 0.0007045974986788797 0.0035225453386613457 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 15315 16384 EAFQLFDR True PC9_epitope_Rep6 1024.4977949121999 1024.49668993586 75.408 2 0.14337299390543704 0.0007045974986788797 0.003522605704417964 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 29379 20672 FVDPAQITM True PC9_epitope_Rep5 1020.49501803088 1020.49392993586 84.57 2 0.14336881310990748 0.0007045974986788797 0.0035229448373220867 ['ENSG00000167325|ENST00000300738|RRM1'] 38933 12997 HHGYSYIL True PC9_epitope_Rep5 988.4766655448 988.47556993586 55.002 2 0.1433644116031836 0.0007045974986788797 0.0035233019086455754 ['ENSG00000134531|ENST00000256951|EMP1'] 105463 21312 SRVPLLLPL True PC9_epitope_Rep1 1006.65390163078 1006.65280993586 86.804 2 0.143362380820022 0.0007045974986788797 0.003523466667622742 ['ENSG00000168140|ENST00000304735|VASN'] 7172 5235 AQYEEIAQR True H1975_Epitope_Rep2 1106.5356369728997 1106.53452993586 25.204 2 0.14335429271579783 0.0007045974986788797 0.00352412293754893 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 116572 19090 TTYEGIFKTL True PC9_epitope_Rep4 1171.6124903112698 1171.6113899358602 81.521 2 0.1433534711019425 0.0007045974986788797 0.003524189610203276 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 134204 18300 VYLQNWSHVL True PC9_epitope_Rep6 1257.65060715549 1257.6495099358601 83.035 2 0.14334989854854074 0.0007045974986788797 0.003524479531776647 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 8510 4897 ATSPVVYTR True NCI_RA007_Epitope_Rep3 992.52909504048 992.52798993586 26.252 2 0.14334483769177314 0.0007045974986788797 0.003524890273390952 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 7578 9485 ASEVCPPPGY True H1975_Epitope_Rep2 1018.4429824580197 1018.44188993586 41.453 2 0.14334440597837939 0.0007045974986788797 0.0035249253136611825 ['ENSG00000131788|ENST00000393045|PIAS3'] 128959 21396 VQIPFFAKL True PC9_epitope_Rep2 1061.62735252977 1061.6262499358602 87.77 2 0.14334209397508424 0.0007045974986788797 0.003525112974646604 ['ENSG00000188641|ENST00000370192|DPYD'] 53645 18771 KSADEVLFTGV True PC9_epitope_Rep3 1164.6026539035602 1164.60154993586 77.423 2 0.1433408494826091 0.0007045974986788797 0.0035252139918806507 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 140750 11119 YSDDNPYYNY True H1975_Epitope_Rep3 1312.48841199696 1312.4878749679299 47.865 1 0.1433286224650908 0.0007045974986788797 0.0035262066292140832 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 136273 12489 WSDGHLIYY True H1975_Epitope_Rep2 1152.52400966004 1152.52290993586 53.13 2 0.14332613909143652 0.0007045974986788797 0.003526408273147053 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2'] 115445 14630 TRMPDGPVAL True PC9_epitope_Rep5 1055.54336520563 1055.54226993586 61.275 2 0.14332483715024263 0.0007045974986788797 0.0035265139921961943 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 6914 12463 AQIGSYVHV True PC9_epitope_Rep4 972.50288029264 972.50178993586 55.746 2 0.14331894944882642 0.0007045974986788797 0.0035269921192808565 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 38894 12961 HHFEGAQIL True PC9_epitope_Rep3 1050.5246783663797 1050.5235899358602 54.879 2 0.14331885227290744 0.0007045974986788797 0.003527000011260069 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 116239 6363 TTDFHNPGY True H1975_Epitope_Rep2 1050.4406739588999 1050.4395699358602 29.403 2 0.1433147557873381 0.0007045974986788797 0.0035273327164093227 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 88576 6297 QTDKLKELY True H1975_Epitope_Rep3 1136.6077392839998 1136.6060849037901 29.226 3 0.14331210913040662 0.0007045974986788797 0.00352754768708186 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 126821 19007 VLPSVLNKF True PC9_epitope_Rep2 1015.60661708519 1015.60552993586 78.475 2 0.14331061295424968 0.0007045974986788797 0.003527669217462661 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 45912 18760 ISEDDPFLLY True H1975_Epitope_Rep2 1210.5757704493801 1210.5746699358601 77.884 2 0.14330785383634934 0.0007045974986788797 0.003527893344118174 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'nc|ENSG00000100890|O15091-4|PRORP', 'GTF2A1-KIAA0391|1|fusion', 'nc|ENSG00000100890|O15091-3|PRORP', 'GTF2A1-KIAA0391|2|fusion', 'FAM177A1-KIAA0391|2|fusion', 'FAM177A1-KIAA0391|1|fusion'] 115240 8925 TREDAGSYTL True PC9_epitope_Rep2 1111.51456717515 1111.51346993586 39.687 2 0.143306949134947 0.0007045974986788797 0.0035279668372410157 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11'] 40089 9509 HPVLLTEA True PC9_epitope_Rep4 878.4861675993401 878.48561496793 44.186 1 0.1433033976268538 0.0007045974986788797 0.003528255357535441 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 103875 9935 SPYSGPKFNSA True PC9_epitope_Rep1 1153.54038800017 1153.53928993586 43.077 2 0.1433017325135198 0.0007045974986788797 0.0035283906374283395 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 71490 12070 LYWSHPRKF True PC9_epitope_Rep5 1232.6454622053996 1232.6438249037901 51.422 3 0.14328667378074844 0.0007045974986788797 0.003529614297795881 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 75589 5808 NLDKNTVGY True H1975_Epitope_Rep2 1022.5032742154599 1022.50216993586 27.331 2 0.14328562420786103 0.0007045974986788797 0.003529699600937618 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11'] 75154 8611 NHYQKQLEI True PC9_epitope_Rep3 1171.5985715826298 1171.59691490379 38.07 3 0.14328388107500972 0.0007045974986788797 0.00352984127709631 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 74214 6755 NEGVATYAA True H1975_Epitope_Rep2 894.4083112014598 894.40776496793 30.898 1 0.14328249867967544 0.0007045974986788797 0.0035299536376987442 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 134133 20154 VYLDKFIRL True PC9_epitope_Rep1 1165.68593003505 1165.68427490379 82.351 3 0.14328230144456927 0.0007045974986788797 0.0035299696691876484 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 35150 8617 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 39.821 2 0.14327987751641094 0.0007045974986788797 0.003530166694668068 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 3404 18096 AGIKEYFNV True PC9_epitope_Rep5 1039.53384606775 1039.53274993586 74.618 2 0.14327821090894768 0.0007045974986788797 0.003530302168769105 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF'] 1888 6304 AEIEPEAQA True H1975_Epitope_Rep2 956.445090633 956.44454496793 29.184 1 0.14327367847824002 0.0007045974986788797 0.0035306706241464963 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 85247 8871 QEQFNSIAA True H1975_Epitope_Rep1 1006.4719740871798 1006.47086993586 39.035 2 0.1432639883841199 0.0007045974986788797 0.0035314584900721854 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 104410 18119 SQLEDAIRL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 74.486 2 0.1432592473355236 0.0007045974986788797 0.003531844030886536 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 61981 16183 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.50137496793 67.457 1 0.1432589711403555 0.0007045974986788797 0.0035318664922923066 ['ENSG00000105397|ENST00000525621|TYK2'] 142625 13875 YYNKVSTVF True PC9_epitope_Rep2 1119.5600608155898 1119.5589699358602 58.652 2 0.14325706178889094 0.0007045974986788797 0.0035320217730294445 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 138472 8002 YHQHLQEQL True PC9_epitope_Rep1 1194.57817049122 1194.57652490379 35.6 3 0.14325607801001403 0.0007045974986788797 0.0035321017828984233 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 89074 10598 QVNDAFTHV True PC9_epitope_Rep2 1029.4879585044898 1029.48686993586 46.081 2 0.1432498736307245 0.0007045974986788797 0.003532606421054743 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 100271 13604 SIYNGDMEKI True PC9_epitope_Rep4 1168.5434247752798 1168.5423299358602 60.222 2 0.14324628266477143 0.0007045974986788797 0.0035328985278452888 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 110211 9516 TEQPPSPLP True H1975_Epitope_Rep1 964.48656152216 964.48546993586 41.526 2 0.14323583724482994 0.0007045974986788797 0.0035337483458775863 ['ENSG00000075568|ENST00000186436|TMEM131'] 73595 12373 MVVQDGIVKA True PC9_epitope_Rep3 1058.57941636118 1058.57830993586 52.622 2 0.14323477060400047 0.0007045974986788797 0.0035338351370152454 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 89248 18721 QVVGGIYGV True PC9_epitope_Rep5 890.4861675993399 890.48561496793 77.028 1 0.14323464389145243 0.0007045974986788797 0.0035338454475864222 ['ENSG00000167658|ENST00000309311|EEF2'] 95928 7965 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 37.326 3 0.14321664067777212 0.0007045974986788797 0.0035353106685659676 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 39368 8605 HKFEQVVAL True NCI_RA007_Epitope_Rep4 1069.59202965021 1069.59092993586 39.882 2 0.14321483118592088 0.0007045974986788797 0.00353545797036859 ['ENSG00000004399|ENST00000324093|PLXND1', 'ENST00000504524.5_1_3:129275157-129277480:-|nuORF', 'ENST00000512744.5_2_3:129275157-129278574:-|nuORF'] 92781 17208 RPADVIFATV True PC9_epitope_Rep6 1087.60259433391 1087.6014899358602 78.779 2 0.14320760587872408 0.0007045974986788797 0.003536046207711311 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 88765 13100 QTPQRLLEV True PC9_epitope_Rep2 1082.6084079903399 1082.60730993586 55.666 2 0.1432045205120215 0.0007045974986788797 0.003536297427727407 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 26306 11677 FHLSSQSSL True PC9_epitope_Rep2 1004.49270953176 1004.49160993586 50.247 2 0.14320239614735386 0.0007045974986788797 0.003536470410310778 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 85707 10046 QHADPPVQI True PC9_epitope_Rep1 1003.50869394907 1003.50758993586 43.51 2 0.14320133529764736 0.0007045974986788797 0.00353655679623405 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 6185 8053 APNLQNQQV True PC9_epitope_Rep6 1010.5145076055 1010.51340993586 40.466 2 0.14319396123861686 0.0007045974986788797 0.0035371573302266507 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 61933 10397 LLDIRSEY True H1975_Epitope_Rep1 1007.5287606873101 1007.52766993586 44.941 2 0.14319392975629408 0.0007045974986788797 0.0035371598943239983 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 21779 13152 ERVPYGVSV True PC9_epitope_Rep5 1004.5290950404799 1004.52798993586 55.593 2 0.1431925305845851 0.0007045974986788797 0.0035372738525966943 ['ENSG00000125898|ENST00000381941|FAM110A'] 35788 14057 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.5172549679301 61.98 1 0.14318791800348693 0.0007045974986788797 0.0035376495590862134 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 7273 11905 ARDFTVSAM True PC9_epitope_Rep2 996.4698659121999 996.46876993586 51.117 2 0.1431863496004069 0.0007045974986788797 0.0035377773185400877 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'EIF4A1|p.H293D|1|0.08|ENSG00000161960|chr17:7577677-7577677|C/G|missense_variant'] 77853 16578 NVELDPEIQ True PC9_epitope_Rep3 1055.51350454599 1055.51297496793 68.905 1 0.1431855749631961 0.0007045974986788797 0.003537840420862712 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 87770 11936 QRDETALQL True PC9_epitope_Rep5 1072.5512870370399 1072.55018993586 50.909 2 0.14318507187757476 0.0007045974986788797 0.00353788140305969 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 21734 16923 ERTLATDIL True PC9_epitope_Rep1 1030.56587447202 1030.56476993586 69.919 2 0.14318091605757438 0.0007045974986788797 0.0035382199611407126 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 16530 11915 EELNADLFR True NCI_RA007_Epitope_Rep1 1105.5403880001697 1105.53928993586 50.331 2 0.14317945177798744 0.0007045974986788797 0.003538339257820891 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 89667 15365 QYVSAFSKL True PC9_epitope_Rep2 1041.54949613189 1041.54838993586 64.383 2 0.14317262258038277 0.0007045974986788797 0.0035388956937868503 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 36608 22228 GVIAEILRGV True PC9_epitope_Rep1 1025.6233297784897 1025.62222993586 90.322 2 0.14316982504013087 0.0007045974986788797 0.003539123659555718 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 77310 9930 NSDPNLHLL True NCI_RA007_Epitope_Rep3 1021.5192586327701 1021.51816993586 46.142 2 0.14316500376538663 0.0007045974986788797 0.0035395165694725576 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 117863 8906 TVYSGEEKL True PC9_epitope_Rep1 1024.5076908895599 1024.5065899358601 39.096 2 0.14316248612534452 0.0007045974986788797 0.003539721761825708 ['ENSG00000166224|ENST00000373202|SGPL1'] 33969 11760 GLSQSALPYR True PC9_epitope_Rep1 1090.5771078620598 1090.5760099358602 50.109 2 0.1431557743718202 0.0007045974986788797 0.0035402688399421203 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 115357 14587 TRISNDLEL True PC9_epitope_Rep5 1059.5560380643099 1059.5549499358601 61.11 2 0.1431511837330807 0.0007045974986788797 0.0035406430733527306 ['ENSG00000007047|ENST00000262891|MARK4'] 23505 18081 EVVERLLSV True PC9_epitope_Rep4 1042.60225998074 1042.60116993586 77.611 2 0.1431452132476898 0.0007045974986788797 0.0035411298519761585 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 25485 7967 FEFDTKTSA True NCI_RA007_Epitope_Rep3 1044.47639076128 1044.47528993586 38.441 2 0.14314390120801285 0.0007045974986788797 0.0035412368325619297 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 44678 14812 ILTDITKGV True PC9_epitope_Rep2 958.5698972233 958.56880993586 62.239 2 0.1431433642904251 0.0007045974986788797 0.0035412806124664516 ['ENSG00000167658|ENST00000309311|EEF2'] 7864 6667 ATADLALGR True NCI_RA007_Epitope_Rep4 886.4872302284999 886.48612993586 32.266 2 0.14313579392810866 0.0007045974986788797 0.0035418979519921765 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 17473 14125 EHFNGVAEL True PC9_epitope_Rep1 1014.4770594676198 1014.47596993586 59.157 2 0.14313533116483523 0.0007045974986788797 0.0035419356923638537 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B'] 128962 21626 VQIPFFAKL True PC9_epitope_Rep5 1061.62735252977 1061.6262499358602 88.226 2 0.14313389824410314 0.0007045974986788797 0.003542052555856944 ['ENSG00000188641|ENST00000370192|DPYD'] 106584 5289 STNSFALNK True NCI_RA007_Epitope_Rep3 980.4927095317599 980.49160993586 27.813 2 0.14312726976838155 0.0007045974986788797 0.003542593198599894 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'ENST00000579209.1_1_17:62758032-62758825:-|nuORF'] 55002 15977 KYQIINEEF True PC9_epitope_Rep4 1182.5920892198599 1182.59098993586 69.386 2 0.1431270684138355 0.0007045974986788797 0.0035426096230956254 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 70859 16684 LYDPVISKL True PC9_epitope_Rep6 1046.6011973515801 1046.60010993586 76.645 2 0.1431270561247525 0.0007045974986788797 0.003542610625518902 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 64770 9996 LQAETSQQL True PC9_epitope_Rep5 1016.51383889916 1016.51274993586 43.425 2 0.1431089734721284 0.0007045974986788797 0.003544085936640892 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 38821 11910 HHALPITDL True PC9_epitope_Rep4 1015.54507945779 1015.5439899358599 53.59 2 0.14310686803391534 0.0007045974986788797 0.003544257752865361 ['ENSG00000065268|ENST00000585809|WDR18'] 104222 15958 SQHGVIIQL True PC9_epitope_Rep1 993.5607295219299 993.56018496793 66.193 1 0.14310463112024346 0.0007045974986788797 0.0035444403073246777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 63271 19434 LLSPRFVDV True PC9_epitope_Rep1 1044.59678067748 1044.59568993586 79.566 2 0.14310017387624616 0.0007045974986788797 0.0035448040907056586 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247027247-247061635:-|nuORF'] 77545 15912 NTDLGNDLYF True H1975_Epitope_Rep2 1170.5193182024198 1170.51822993586 66.406 2 0.14309808834367155 0.0007045974986788797 0.0035449743167064326 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 24627 23005 FAISILQQL True PC9_epitope_Rep5 1031.60153170475 1031.60097496793 93.479 1 0.14309794875490534 0.0007045974986788797 0.003544985710554672 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 104962 15883 SRDGMNIVL True PC9_epitope_Rep5 1003.5120650773499 1003.51096993586 66.084 2 0.14309657096602696 0.0007045974986788797 0.0035450981736850034 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 87797 10004 QRDQQLEAL True PC9_epitope_Rep3 1099.5621860739097 1099.56108993586 43.435 2 0.14308278279806794 0.0007045974986788797 0.0035462238391167663 ['nc|ENSG00000090615|Q08378-2|GOLGA3', 'GOLGA3|p.E756Sfs*55|1|0.47|ENSG00000090615|chr12:132796055-132796055|C/-|frameshift_variant', 'nc|ENSG00000090615|Q08378-4|GOLGA3', 'ENSG00000090615|ENST00000450791|GOLGA3'] 1926 13642 AEILELAGNAA True H1975_Epitope_Rep2 1070.5607890915799 1070.5596899358602 57.614 2 0.14307422597673025 0.0007045974986788797 0.003546922596044637 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 87901 9997 QRIIQQETL True PC9_epitope_Rep2 1127.62987171091 1127.6287699358602 43.781 2 0.14306888177349172 0.0007045974986788797 0.003547359077321381 ['ENSG00000180182|ENST00000324817|MED14'] 3274 5589 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 26.886 2 0.1430649971756037 0.0007045974986788797 0.0035476763805748724 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 62625 23458 LLLDVTPLSL True PC9_epitope_Rep2 1082.6587122277 1082.6576099358601 95.702 2 0.14306186592773304 0.0007045974986788797 0.003547932168902714 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 104285 14893 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.57494993586 69.278 2 0.1430601867276839 0.0007045974986788797 0.0035480693485201247 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 48653 12754 KASDLYITL True NCI_RA007_Epitope_Rep1 1022.56481184286 1022.56370993586 53.596 2 0.14305846225442925 0.0007045974986788797 0.00354821023214083 ['ENSG00000143418|ENST00000368954|CERS2'] 63046 12738 LLQDFFNGR True NCI_RA007_Epitope_Rep3 1108.56654317836 1108.5654499358602 57.338 2 0.1430570846649901 0.0007045974986788797 0.0035483227805190687 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 24067 19482 EYNSDLHQFF True PC9_epitope_Rep2 1298.5567663402996 1298.5556699358601 80.318 2 0.14305670846134577 0.0007045974986788797 0.003548353516787402 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 65838 9732 LSDLGKLSY True H1975_Epitope_Rep1 994.5335117145801 994.53240993586 42.361 2 0.14305567874690006 0.0007045974986788797 0.003548437646987839 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 108729 5753 SYRQSSATSSF True NCI_RA007_Epitope_Rep1 1219.5469299325898 1219.5458299358602 26.434 2 0.14305419678524833 0.0007045974986788797 0.0035485587303716263 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 76809 4915 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 25.5 2 0.14305264854119318 0.0007045974986788797 0.0035486852337265617 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 107465 19334 SVLVSVSEV True PC9_epitope_Rep5 917.50696261357 917.50641496793 79.412 1 0.1430510951017646 0.0007045974986788797 0.0035488121660821543 ['ENSG00000221926|ENST00000649191|TRIM16'] 11754 15129 DHDGNIVEL True PC9_epitope_Rep1 1010.46688870674 1010.46578993586 63.014 2 0.14304523924048895 0.0007045974986788797 0.0035492906921131924 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 95681 16416 RYFENPQVI True PC9_epitope_Rep3 1164.5927579262 1164.5916699358602 68.281 2 0.14304061133422102 0.0007045974986788797 0.0035496689181064786 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 95919 7563 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.61488490379 36.873 3 0.14303942135134776 0.0007045974986788797 0.0035497661785850246 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 39882 8065 HPDYNNEL True PC9_epitope_Rep5 1000.4250238947601 1000.42392993586 35.959 2 0.14303840959742412 0.0007045974986788797 0.0035498488740161047 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 35678 6313 GTEITHAVVIK True NCI_RA007_Epitope_Rep1 1166.6659228664598 1166.66428490379 28.581 3 0.14303608869023385 0.0007045974986788797 0.0035500385799570925 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 55328 6682 LAEFATGNDR True NCI_RA007_Epitope_Rep2 1092.5199869087598 1092.5188899358602 30.602 2 0.1430331162549128 0.0007045974986788797 0.0035502815550973142 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000453697.1_1_7:63894611-63894797:+|nuORF'] 137504 6197 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 28.809 1 0.1430271444760814 0.0007045974986788797 0.003550769754824388 ['ENSG00000127184|ENST00000247655|COX7C'] 11759 13807 DHDGNIVEL True PC9_epitope_Rep4 1010.46688870674 1010.46578993586 61.005 2 0.1430269360970248 0.0007045974986788797 0.003550786791252916 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 89187 7538 QVSPEAGVQKV True PC9_epitope_Rep3 1140.6138872935999 1140.61278993586 33.995 2 0.14302354776919107 0.0007045974986788797 0.0035510638218650046 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 24103 9469 EYPDRIM[Oxidation]NTF True NCI_RA007_Epitope_Rep3 1300.57578791316 1300.57468993586 44.348 2 0.14302338572925485 0.0007045974986788797 0.003551077070832102 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 118658 11318 TYSPALNKM[Oxidation]F True PC9_epitope_Rep6 1186.5692459807399 1186.5681499358602 54.555 2 0.14302077650387096 0.0007045974986788797 0.0035512904172258935 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 124755 20084 VHCGIIEPLM True PC9_epitope_Rep5 1110.55657274162 1110.5554699358602 82.303 2 0.14301933905044512 0.0007045974986788797 0.003551407957737478 ['ENSG00000182481|ENST00000330459|KPNA2'] 97244 9489 SEADIRGFVA True NCI_RA007_Epitope_Rep3 1063.52982331647 1063.5287299358602 44.424 2 0.14300796468736995 0.0007045974986788797 0.003552338175151149 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 98687 6937 SGEVLVNVK True NCI_RA007_Epitope_Rep1 943.53384606775 943.53274993586 30.987 2 0.14300708491765687 0.0007045974986788797 0.0035524101344956674 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 97885 9182 SELSRTYLP True H1975_Epitope_Rep1 1064.55022440788 1064.54912993586 40.225 2 0.14300132803038038 0.0007045974986788797 0.0035528810455161316 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1', 'DAPK1-AGTPBP1|1|fusion'] 4700 16798 ALATLIHQV True PC9_epitope_Rep3 964.5705659296401 964.56946993586 69.761 2 0.14299512422019076 0.0007045974986788797 0.0035533885840119722 ['ENSG00000111652|ENST00000543155|COPS7A'] 118653 12003 TYSPALNKM[Oxidation]F True PC9_epitope_Rep4 1186.5692459807399 1186.5681499358602 53.965 2 0.14299488665423749 0.0007045974986788797 0.0035534080208964257 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 721 11185 AAVGFPTHL True H1975_Epitope_Rep2 911.48650195251 911.48540993586 48.061 2 0.14298988463244955 0.0007045974986788797 0.0035538172947824297 ['ENSG00000177352|ENST00000321895|CCDC71'] 70799 16746 LYAPYSTHF True PC9_epitope_Rep1 1097.51819600361 1097.5170899358602 69.242 2 0.1429814573585277 0.0007045974986788797 0.0035545069344165587 ['ENSG00000013588|ENST00000014914|GPRC5A'] 134693 16362 VYTHNLYYL True PC9_epitope_Rep4 1184.5866099165999 1184.58550993586 70.899 2 0.14297917396797102 0.0007045974986788797 0.0035546938168394783 ['ENSG00000198954|ENST00000361983|KIFBP'] 87872 17690 QRIDEFEAL True PC9_epitope_Rep5 1119.5560380643099 1119.5549499358601 73.06 2 0.14297166959662957 0.0007045974986788797 0.003555308075298215 ['ENSG00000092820|ENST00000367075|EZR'] 135721 21029 WLVDHVYAI True PC9_epitope_Rep1 1114.5811306133398 1114.58002993586 85.716 2 0.14296378596821244 0.0007045974986788797 0.003555953490724219 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000529672.1_1_11:111613245-111618714:-|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 17639 14861 EHISSLIKL True PC9_epitope_Rep2 1038.6073453611798 1038.6062499358602 62.426 2 0.14295921195720152 0.0007045974986788797 0.0035563280083167875 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 35396 15215 GSDEPAFMYY True H1975_Epitope_Rep2 1178.45902644498 1178.45847496793 63.681 1 0.14295490480082576 0.0007045974986788797 0.0035566807117853863 ['ENSG00000155096|ENST00000337198|AZIN1'] 73317 9201 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 40.345 2 0.1429490037139488 0.0007045974986788797 0.0035571639950530707 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 114721 16456 TQILSVPKV True PC9_epitope_Rep1 983.6015317047498 983.60042993586 68.123 2 0.14293924756089926 0.0007045974986788797 0.003557963140917389 ['nc|ENSG00000120802|P42166|TMPO'] 31757 7499 GEHSIYCTV True NCI_RA007_Epitope_Rep3 1007.43823143075 1007.43712993586 36.62 2 0.14293787161934748 0.0007045974986788797 0.0035580758613587018 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55', 'ENST00000465534.5_1_1:207500166-207510288:+|nuORF'] 104227 16126 SQHGVIIQL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 67.177 2 0.14293745109143965 0.0007045974986788797 0.0035581103127235556 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 21244 12329 ERDPSPWAV True PC9_epitope_Rep6 1055.50360856863 1055.5025099358602 58.822 2 0.1429334703150607 0.0007045974986788797 0.0035584364505953535 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 14101 20923 DRYQYPFVL True PC9_epitope_Rep2 1199.5975089534697 1199.59640993586 85.926 2 0.14292378956428076 0.0007045974986788797 0.003559229700972871 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 35177 5351 GQYGNPLNK True NCI_RA007_Epitope_Rep5 989.4930438849299 989.49194993586 27.274 2 0.1429229133695052 0.0007045974986788797 0.0035593015059081305 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 42401 6589 IEDGKVVTV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 30.255 2 0.14291755818945318 0.0007045974986788797 0.0035597403988900174 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 111315 14946 THMTAIVGM True PC9_epitope_Rep3 959.4568587003499 959.45576993586 62.621 2 0.14290791366769398 0.0007045974986788797 0.003560530967729482 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 24892 16737 FAYEGPMYL True H1975_Epitope_Rep2 1089.4841189940098 1089.48302993586 69.613 2 0.14290435433950405 0.0007045974986788797 0.0035608227726105506 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 8650 19951 AVAELNYGL True PC9_epitope_Rep1 948.4916469026 948.49054993586 81.564 2 0.1429038594178697 0.0007045974986788797 0.0035608633497170796 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 89238 18309 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48561496793 75.753 1 0.1429028072411118 0.0007045974986788797 0.0035609496159866834 ['ENSG00000167658|ENST00000309311|EEF2'] 136440 15622 WVDSDQLLY True H1975_Epitope_Rep1 1137.53423999057 1137.5331499358601 65.376 2 0.14288780617969013 0.0007045974986788797 0.003562179754365698 ['ENSG00000116221|ENST00000360840|MRPL37'] 73340 9633 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4690749679298 42.069 1 0.14288722895221667 0.0007045974986788797 0.003562227097420336 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 78482 8643 NYNNQSSNF True PC9_epitope_Rep1 1086.4366512076201 1086.43554993586 38.084 2 0.14286454976147334 0.0007045974986788797 0.003564087694124456 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 132465 14626 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51767496793 61.418 1 0.14285894715529035 0.0007045974986788797 0.0035645474794734735 ['ENSG00000100220|ENST00000216038|RTCB'] 77142 4960 NRPGTVSSL True PC9_epitope_Rep4 929.49304388493 929.49194993586 25.683 2 0.14285463789680283 0.0007045974986788797 0.003564901164572572 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 117085 22418 TVISILNTI True PC9_epitope_Rep2 972.58554728744 972.58499496793 91.723 1 0.14284953831676578 0.0007045974986788797 0.003565319760808727 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 142655 20096 YYPEHFTLL True PC9_epitope_Rep2 1181.57571087973 1181.57460993586 82.707 2 0.1428412248501594 0.0007045974986788797 0.0035660022717571545 ['ENSG00000100065|ENST00000251973|CARD10'] 30462 13167 GAFVHFHGV True PC9_epitope_Rep1 969.4820852784097 969.48098993586 55.512 2 0.1428406138129927 0.0007045974986788797 0.00356605244121153 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 78616 21080 NYSPYVNYF True PC9_epitope_Rep5 1165.50802524273 1165.50747496793 86.146 1 0.14283504141096665 0.0007045974986788797 0.0035665099978658818 ['ENSG00000156162|ENST00000414645|DPY19L4'] 11928 16824 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.5480899358602 69.962 2 0.14283055614406717 0.0007045974986788797 0.0035668783308686336 ['ENSG00000273749|ENST00000617928|CYFIP1'] 73049 15905 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 69.106 2 0.1428283782487214 0.0007045974986788797 0.0035670571946519974 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 22365 10690 ETEDVNLAY True H1975_Epitope_Rep2 1052.4662200004 1052.46567496793 46.143 1 0.1428273636743219 0.0007045974986788797 0.0035671405215370474 ['ENSG00000153767|ENST00000283875|GTF2E1'] 24155 13581 EYQDLLNVK True PC9_epitope_Rep6 1120.5764391557198 1120.57534993586 63.978 2 0.14282681359200658 0.0007045974986788797 0.0035671857005454373 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 77132 20082 NRNFSNFIL True PC9_epitope_Rep1 1123.57744221523 1123.5763499358602 82.073 2 0.14282208235342167 0.0007045974986788797 0.0035675743070517647 ['ENSG00000138061|ENST00000610745|CYP1B1'] 1615 10005 AEFHQIEGVVA True H1975_Epitope_Rep2 1198.59823722946 1198.5971499358602 43.474 2 0.14281778085916735 0.0007045974986788797 0.0035679276524074877 ['nc|ENSG00000179115|Q9Y285-2|FARSA', 'ENSG00000179115|ENST00000314606|FARSA'] 125258 15311 VILEGELERA True PC9_epitope_Rep3 1127.6186383208699 1127.61754993586 64.045 2 0.14280910960337548 0.0007045974986788797 0.0035686400565085375 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 32771 8316 GHDASQITL True PC9_epitope_Rep6 940.46140940348 940.46030993586 41.615 2 0.14280864030928955 0.0007045974986788797 0.003568678616315431 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 31877 11023 GELLFVHSA True H1975_Epitope_Rep2 971.50763131991 971.50652993586 47.429 2 0.14280826865226132 0.0007045974986788797 0.0035687091540131445 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 32013 7536 GEQKFSSLP True H1975_Epitope_Rep3 991.4974605590298 991.49636993586 33.969 2 0.1428049678896495 0.0007045974986788797 0.00356898037697633 ['ENSG00000166741|ENST00000299964|NNMT', 'NNMT|p.G217V|1|0.08|ENSG00000166741|chr11:114312332-114312332|G/T|missense_variant'] 127855 20935 VPFPTPLEA True PC9_epitope_Rep5 969.5171333744498 969.51658496793 85.585 1 0.14280468422824613 0.0007045974986788797 0.0035690036863282367 ['ENSG00000196976|ENST00000357360|LAGE3'] 1893 9793 AEIETELQA True H1975_Epitope_Rep2 1002.4869554449798 1002.48637496793 42.657 1 0.1427998620363307 0.0007045974986788797 0.003569399964159842 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 71538 12514 MADPNIRFL True H1975_Epitope_Rep3 1075.54845058607 1075.5473499358602 53.331 2 0.14279745875337452 0.0007045974986788797 0.003569597477324243 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 77384 9445 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.4600299358601 41.298 2 0.14279296240733685 0.0007045974986788797 0.0035699670374481456 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 106910 3313 SVDPKNYPK True NCI_RA007_Epitope_Rep4 1046.53965972418 1046.53856993586 18.478 2 0.14278178745991188 0.0007045974986788797 0.0035708856843784274 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 140930 4148 YSENVERTKY True H1975_Epitope_Rep2 1287.60953018915 1287.60787490379 21.054 3 0.14277646010454026 0.0007045974986788797 0.003571323707152754 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant', 'TANC2-CRB3|1|fusion', 'TANC2-CRB3|2|fusion'] 93461 19061 RQIDDILSV True PC9_epitope_Rep1 1057.57677350889 1057.57566993586 78.108 2 0.14277048878018345 0.0007045974986788797 0.0035718147413621956 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000497973.5_1_1:46032543-46034819:+|nuORF'] 25550 20144 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54732993586 84.274 2 0.1427670680858863 0.0007045974986788797 0.00357209606223341 ['ENSG00000125356|ENST00000371437|NDUFA1'] 11696 11300 DGYDYDGYR True PC9_epitope_Rep5 1122.42541781758 1122.4243299358602 48.458 2 0.14276699823268965 0.0007045974986788797 0.003572101807250101 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 96204 12955 RYPSNLQLF True NCI_RA007_Epitope_Rep5 1136.59784330664 1136.59674993586 56.511 2 0.1427664289738327 0.0007045974986788797 0.0035721486258020892 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 21908 7596 ESDPAYQQY True H1975_Epitope_Rep3 1099.44581890899 1099.44472993586 34.199 2 0.14276536177285667 0.0007045974986788797 0.0035722363991199206 ['ENSG00000155660|ENST00000652332|PDIA4'] 11940 15312 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.54754490379 71.017 3 0.1427615323068766 0.0007045974986788797 0.0035725513760995198 ['ENSG00000273749|ENST00000617928|CYFIP1'] 128777 18264 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 75.461 2 0.1427569553622967 0.0007045974986788797 0.003572927870017057 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 87995 13731 QRNPQGFVL True PC9_epitope_Rep1 1057.5668775315298 1057.56578993586 57.663 2 0.1427440464022203 0.0007045974986788797 0.0035739899576041284 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 53027 8474 KPKVIIVQA True PC9_epitope_Rep5 994.6539016307798 994.65280993586 37.538 2 0.14274183250550182 0.0007045974986788797 0.0035741721379274416 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 103945 16596 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51234993586 71.812 2 0.14274157519140834 0.0007045974986788797 0.003574193312758184 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 31628 13161 GEFGGFGSV True NCI_RA007_Epitope_Rep3 855.3762827971899 855.37573496793 59.043 1 0.14273996838609002 0.0007045974986788797 0.003574325542418958 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 68089 9209 LTDNDPVTY True H1975_Epitope_Rep2 1036.47130538084 1036.47020993586 40.376 2 0.14273686411055525 0.0007045974986788797 0.0035745810179209888 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 129267 14242 VQVGETFKV True PC9_epitope_Rep3 1005.5494961318899 1005.54838993586 59.867 2 0.1427275717129806 0.0007045974986788797 0.003575345871481956 ['SMAD4|p.L540Pfs*10|1|0.09|ENSG00000141646|chr18:51078424-51078430|TACTTCA/-|frameshift_variant', 'ENSG00000141646|ENST00000342988|SMAD4'] 99261 9048 SHQGDYAVL True PC9_epitope_Rep4 988.4614094034798 988.46030993586 42.377 2 0.1427147909467586 0.0007045974986788797 0.003576398116613455 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT', 'AASDHPPT|p.Y174Ifs*11|1|0.09|ENSG00000149313|chr11:106090664-106090664|T/-|frameshift_variant'] 3098 10859 AGAEGFVRV True PC9_epitope_Rep4 904.4766655447999 904.47556993586 49.53 2 0.14271225020094847 0.0007045974986788797 0.0035766073337590884 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 28555 11643 FSEQVAMGY True H1975_Epitope_Rep3 1030.4429824580197 1030.4418899358602 49.919 2 0.14270046822953325 0.0007045974986788797 0.003577577676332924 ['ENSG00000179051|ENST00000375436|RCC2'] 29207 7722 FTTDLDSPR True NCI_RA007_Epitope_Rep1 1050.49818883502 1050.49708993586 34.029 2 0.14269933619179018 0.0007045974986788797 0.003577670922739245 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 104118 4934 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 24.072 2 0.1426993270882744 0.0007045974986788797 0.003577671672609297 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 97300 9691 SEALPSDIA True H1975_Epitope_Rep2 901.43927697657 901.43872496793 42.258 1 0.14269637464535595 0.0007045974986788797 0.003577914877924859 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 107434 17540 SVLQSIEKI True PC9_epitope_Rep4 1015.5913609438699 1015.59026993586 75.482 2 0.14269546596236724 0.0007045974986788797 0.003577989733320209 ['ENSG00000121931|ENST00000369763|LRIF1'] 43837 12424 IHSPVVNEL True PC9_epitope_Rep2 1006.54474510462 1006.54364993586 53.097 2 0.1426881728710576 0.0007045974986788797 0.0035785905791577855 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 45672 17230 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6749899358601 71.093 2 0.14268608637886873 0.0007045974986788797 0.0035787624945281776 ['ENSG00000136628|ENST00000366923|EPRS1'] 100985 19503 SLFRVITEV True PC9_epitope_Rep4 1062.60734536118 1062.6062499358602 83.137 2 0.14268603699467844 0.0007045974986788797 0.0035787665636105286 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 72290 9557 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep3 983.4269984211501 983.42590993586 41.77 2 0.14268477923771297 0.0007045974986788797 0.0035788701998768395 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 70943 15650 LYGKIAEAF True PC9_epitope_Rep4 1010.5436824754598 1010.54258993586 68.125 2 0.14268414529120763 0.0007045974986788797 0.0035789224367322797 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 45210 17179 IPRVPSLSV True PC9_epitope_Rep2 966.5862159937799 966.58510993586 71.338 2 0.14268201039132972 0.0007045974986788797 0.0035790983569135063 ['ENSG00000152464|ENST00000378197|RPP38'] 111212 11618 THISDTSVVL True PC9_epitope_Rep6 1070.56078909158 1070.5596899358602 55.811 2 0.1426799285994912 0.0007045974986788797 0.003579269909146259 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 131133 7214 VTEGSFVYK True NCI_RA007_Epitope_Rep4 1028.5178616504397 1028.51676993586 34.382 2 0.1426699139702765 0.0007045974986788797 0.0035800952891948496 ['ENSG00000057608|ENST00000380191|GDI2'] 46450 10745 ISTEVNPKL True PC9_epitope_Rep5 999.56006081559 999.55896993586 46.322 2 0.1426646310083117 0.0007045974986788797 0.003580530773468804 ['ENSG00000007545|ENST00000397412|CRAMP1'] 104916 16197 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.4909699358602 70.245 2 0.14266069682376284 0.0007045974986788797 0.003580855109690183 ['ENSG00000113387|ENST00000265073|SUB1'] 997 6014 AEAAPPLRP True H1975_Epitope_Rep3 920.50796567308 920.50686993586 28.145 2 0.1426599475539173 0.0007045974986788797 0.0035809168831912844 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 73743 9685 NADHTTLLL True NCI_RA007_Epitope_Rep3 996.52400966004 996.52290993586 45.172 2 0.14265282751991143 0.0007045974986788797 0.003581503946684104 ['VPS11|p.S379Dfs*2|1|0.05|ENSG00000160695|chr11:119081555-119081556|-/GACTGACC|frameshift_variant', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENSG00000160695|ENST00000621676|VPS11'] 853 7051 ADEGISFR True H1975_Epitope_Rep3 893.42429561877 893.42318993586 32.087 2 0.14264175218338604 0.0007045974986788797 0.003582417323987498 ['ENSG00000117450|ENST00000319248|PRDX1'] 95918 7476 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.61488490379 36.528 3 0.14263992282526458 0.0007045974986788797 0.003582568212453443 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 97644 10889 SEFTKIITP True NCI_RA007_Epitope_Rep5 1034.5648118428599 1034.56370993586 48.524 2 0.14263980288235859 0.0007045974986788797 0.003582578105761876 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 138789 22313 YIVDLLTHL True PC9_epitope_Rep3 1085.61209638845 1085.61098993586 91.112 2 0.1426357321797759 0.0007045974986788797 0.0035829138875571108 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 1112 4892 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.39082993586 23.901 2 0.1426352934374594 0.0007045974986788797 0.003582950080147804 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 70599 25419 LWHIWRERN True H1975_Epitope_Rep2 1308.68397297244 1308.68233490379 104.38 3 0.1426311804557205 0.0007045974986788797 0.0035832893845640867 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 134899 20066 VYVSDIQEL True PC9_epitope_Rep1 1064.5389910178399 1064.5378899358602 82.01 2 0.14262368101705522 0.0007045974986788797 0.003583908140108979 ['ENSG00000132182|ENST00000254508|NUP210'] 64809 4669 LQDAEIAR True NCI_RA007_Epitope_Rep4 914.4821448480599 914.48104993586 24.381 2 0.14262203543429475 0.0007045974986788797 0.003584043926250439 ['ENSG00000197956|ENST00000368719|S100A6'] 34709 8110 GQDVGRYQV True PC9_epitope_Rep5 1020.49885754136 1020.49776993586 36.134 2 0.14261914682016652 0.0007045974986788797 0.0035842822941369694 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 20791 10429 EQIAEFKEA True PC9_epitope_Rep5 1063.51858992643 1063.51748993586 45.102 2 0.14261594901959082 0.0007045974986788797 0.0035845461943790537 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF'] 128072 10799 VPLAIVNKA True PC9_epitope_Rep4 923.58040233735 923.57930993586 49.297 2 0.14261346794795196 0.0007045974986788797 0.0035847509594574283 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 37886 18688 GYSEHFVEF True PC9_epitope_Rep1 1113.47672511445 1113.47562993586 76.673 2 0.14261089872783506 0.0007045974986788797 0.0035849630117431633 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 128216 12886 VPNKFLVTA True PC9_epitope_Rep2 987.5753169569099 987.57420993586 54.864 2 0.1426093984470756 0.0007045974986788797 0.003585086844167196 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 10058 13474 AYSRVQYQF True PC9_epitope_Rep5 1160.5614577979202 1160.56036993586 56.845 2 0.1426073459034008 0.0007045974986788797 0.0035852562669725987 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 104276 16685 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.57494993586 69.424 2 0.14260446300015567 0.0007045974986788797 0.003585494243441186 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 21471 16031 ERLGQFM[Oxidation]TL True PC9_epitope_Rep5 1109.55393026977 1109.55282993586 66.651 2 0.14259992743556157 0.0007045974986788797 0.0035858686747112954 ['ENSG00000113739|ENST00000265087|STC2'] 139077 15187 YLDDPTNSWY True H1975_Epitope_Rep2 1272.52988288612 1272.52937496793 63.574 1 0.14259103345757332 0.0007045974986788797 0.0035866030252783014 ['ENSG00000064195|ENST00000434704|DLX3'] 17187 15209 EGSPIKVTL True PC9_epitope_Rep3 942.53859709502 942.53750993586 63.647 2 0.1425872068131825 0.0007045974986788797 0.0035869190263826812 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF'] 28671 19030 FSPAGPILSIR True PC9_epitope_Rep2 1156.6604435632 1156.65934993586 78.563 2 0.14258565296238376 0.0007045974986788797 0.003587047349973847 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 137689 6545 YEKEGEFVA True H1975_Epitope_Rep2 1070.4920408254197 1070.49094993586 30.086 2 0.14258373598743024 0.0007045974986788797 0.003587205668175513 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 40641 7622 HRNEVTVEL True PC9_epitope_Rep4 1095.56727145435 1095.5661699358602 36.699 2 0.14257551949280264 0.0007045974986788797 0.0035878843266258765 ['ENSG00000102753|ENST00000261667|KPNA3'] 116765 17157 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54427496793 71.628 1 0.1425705425768057 0.0007045974986788797 0.00358829546730805 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 74757 16226 NHASLISAL True PC9_epitope_Rep3 924.50288029264 924.50178993586 67.551 2 0.1425701293913194 0.0007045974986788797 0.003588329602467912 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 43306 7283 IFVGGIKEN True NCI_RA007_Epitope_Rep3 975.5389314481899 975.53782993586 35.757 2 0.14256911802119082 0.0007045974986788797 0.0035884131577814385 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 17552 16664 EHGNFLITV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 76.567 2 0.14255985889751013 0.0007045974986788797 0.0035891781989243945 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 141063 10162 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 44.089 2 0.14255902238664697 0.0007045974986788797 0.0035892473241525462 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 54580 19938 KYITDWQNVF True PC9_epitope_Rep4 1312.6451874218799 1312.6440899358602 84.827 2 0.14255739611988202 0.0007045974986788797 0.003589381714784948 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 97738 10770 SEILYSAPP True H1975_Epitope_Rep1 975.49131254943 975.4907649679301 46.389 1 0.14254903490111726 0.0007045974986788797 0.0035900727439039637 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 99335 10021 SHSSFQASL True PC9_epitope_Rep3 962.44575933934 962.44466993586 43.502 2 0.14253954717914372 0.0007045974986788797 0.0035908570349628107 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 134099 16761 VYKTIMEQF True PC9_epitope_Rep4 1157.57908200801 1157.5779899358602 72.438 2 0.14252991809753734 0.0007045974986788797 0.003591653185190079 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 18783 9362 ELDDTLKY True H1975_Epitope_Rep3 995.4811417885501 995.48004993586 41.011 2 0.14252712678137144 0.0007045974986788797 0.0035918840091065073 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 29364 13129 FVDKNNDLL True PC9_epitope_Rep5 1076.55022440788 1076.54912993586 55.505 2 0.1425198020408047 0.0007045974986788797 0.0035924897880999914 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 8225 8852 ATGDMSGLLK True NCI_RA007_Epitope_Rep5 991.5008316873099 991.49972993586 40.714 2 0.142518040599691 0.0007045974986788797 0.0035926354799198637 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 68626 22867 LTIDDGIFEV True PC9_epitope_Rep5 1120.56520576568 1120.5641099358602 92.955 2 0.14250835128712216 0.0007045974986788797 0.0035934370044430723 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 108237 23102 SYIDVLPEF True PC9_epitope_Rep1 1081.53317736141 1081.53208993586 93.663 2 0.14250758657525223 0.0007045974986788797 0.0035935002709041523 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 29269 11789 FVAESHIIL True H1975_Epitope_Rep2 1027.57023157647 1027.56912993586 50.42 2 0.14250273846519146 0.0007045974986788797 0.003593901392483863 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 101589 23308 SLLPAIVEL True PC9_epitope_Rep1 953.57973363101 953.57918496793 94.442 1 0.14249522029698214 0.0007045974986788797 0.0035945235164681105 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 60971 16998 LIDTLLDGY True H1975_Epitope_Rep2 1021.5331773614098 1021.53267496793 70.636 1 0.14248989279259064 0.0007045974986788797 0.0035949644290075283 ['nc|nan|Q9BWL3-5|C1orf43', 'nc|nan|Q9BWL3-3|C1orf43', 'nc|nan|Q9BWL3-4|C1orf43', 'nc|nan|Q9BWL3-2|C1orf43', 'ENSG00000143612|ENST00000368521|C1orf43'] 92775 18890 RPADVIFATV True PC9_epitope_Rep2 1087.60259433391 1087.6014899358602 78.025 2 0.14248540724219172 0.0007045974986788797 0.003595335701742317 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 111601 9154 TIDEHDAII True H1975_Epitope_Rep3 1025.5029398622898 1025.50184993586 40.2 2 0.14248142826716775 0.0007045974986788797 0.0035956650766583247 ['nc|ENSG00000152558|Q8N131-2|TMEM123', 'ENSG00000152558|ENST00000398136|TMEM123'] 73094 20651 MRFLAATFL True PC9_epitope_Rep4 1068.57902243836 1068.57792993586 87.592 2 0.14248004390717764 0.0007045974986788797 0.0035957796793861605 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 95235 14714 RVLPPSALQSV True PC9_epitope_Rep2 1165.68190728377 1165.68080993586 61.865 2 0.14247613102165158 0.0007045974986788797 0.0035961036229368295 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'nc|ENSG00000178999|Q96GD4-2|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB'] 117290 14231 TVMDSKIVQV True PC9_epitope_Rep2 1118.60054572858 1118.59944993586 60.006 2 0.1424714685741252 0.0007045974986788797 0.0035964896597257797 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 35467 5190 GSIEINIKK True NCI_RA007_Epitope_Rep3 1000.5916952970399 1000.59058993586 27.412 2 0.14246808444718576 0.0007045974986788797 0.0035967698811274528 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 49947 17971 KILQELPSV True PC9_epitope_Rep1 1025.6120963884498 1025.61098993586 73.918 2 0.14246789677216098 0.0007045974986788797 0.003596785422123756 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 40659 12724 HRQEIQVVL True PC9_epitope_Rep1 1120.63529144452 1120.6341899358601 53.817 2 0.14245383953787097 0.0007045974986788797 0.00359794966322757 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 126547 23254 VLLNEILEQV True PC9_epitope_Rep5 1168.67033954056 1168.66924993586 94.432 2 0.1424524561671372 0.0007045974986788797 0.0035980642562636164 ['ENSG00000109805|ENST00000251496|NCAPG'] 35659 8230 GTDTGVVQY True H1975_Epitope_Rep3 938.4345259493 938.43397496793 36.64 1 0.14244906635309101 0.0007045974986788797 0.0035983450705485043 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF', 'WDR19|p.H891Tfs*26|1|0.25|ENSG00000157796|chr4:39245391-39245391|C/-|frameshift_variant'] 1444 8506 AEEGFTQVT True H1975_Epitope_Rep3 980.4450906329998 980.44398993586 37.704 2 0.14244343490003578 0.0007045974986788797 0.0035988116316665072 ['ENSG00000115946|ENST00000263657|PNO1'] 54428 13183 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64810993586 57.386 2 0.1424359926371192 0.0007045974986788797 0.003599428308935196 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 141344 9328 YTDTYTEAY True H1975_Epitope_Rep3 1125.4502355830898 1125.4491299358601 40.877 2 0.14243280645139278 0.0007045974986788797 0.0035996923532036784 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 70003 10357 LVLVGDGGTGK True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 44.72 2 0.14242734189189868 0.0007045974986788797 0.0036001452546739515 ['ENSG00000132341|ENST00000543796|RAN'] 97696 7251 SEIDMSVKA True H1975_Epitope_Rep1 978.46919720586 978.46808993586 32.901 2 0.1424261086006551 0.0007045974986788797 0.0036002474773971518 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 142104 12804 YVPETVYRV True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 57.111 2 0.1424139640088238 0.0007045974986788797 0.0036012542493017545 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 117664 20545 TVTSDLLQV True PC9_epitope_Rep1 974.5284263341399 974.5273299358599 83.838 2 0.14241124276250114 0.0007045974986788797 0.003601479875623736 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 118599 15133 TYRNVMEQF True PC9_epitope_Rep2 1186.54409348162 1186.54298993586 63.467 2 0.14240829152527795 0.0007045974986788797 0.0036017245870049296 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 38997 6346 HHMGGMAGL True PC9_epitope_Rep4 909.3949271501299 909.39382993586 31.487 2 0.14240741194342507 0.0007045974986788797 0.003601797523571022 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 92883 16990 RPFQSELFA True PC9_epitope_Rep1 1093.55564414149 1093.5545499358602 70.176 2 0.1424044713515574 0.0007045974986788797 0.0036020413735680496 ['ENST00000488504.5_1_22:50695267-50699938:-|nuORF', 'nc|ENSG00000188130|P53778-2|MAPK12', 'ENSG00000188130|ENST00000215659|MAPK12'] 73042 18441 MRDPIRILV True PC9_epitope_Rep1 1111.65358436095 1111.65248993586 75.724 2 0.14240074545634737 0.0007045974986788797 0.0036023503687513843 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 24132 21909 EYPFILDAF True PC9_epitope_Rep6 1113.5382627418498 1113.5371699358602 97.175 2 0.14239781839071436 0.0007045974986788797 0.0036025931340105117 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 140285 7685 YRAQPSASL True PC9_epitope_Rep1 991.5086939490699 991.50758993586 34.383 2 0.14239644373166302 0.0007045974986788797 0.0036027071512211486 ['ENSG00000239306|ENST00000310137|RBM14'] 16558 12273 EELSNVLAA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 52.292 1 0.14239591400836318 0.0007045974986788797 0.0036027510885791457 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 108443 21006 SYLPLAHMF True PC9_epitope_Rep2 1077.53173789277 1077.53064993586 86.253 2 0.14239256155258512 0.0007045974986788797 0.0036030291669300134 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 36937 19445 GVLSDLTKV True PC9_epitope_Rep3 930.53859709502 930.53750993586 80.021 2 0.1423905494844497 0.0007045974986788797 0.003603196073493841 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 39117 13025 HHYEGAVVIL True PC9_epitope_Rep2 1136.5978433066398 1136.59674993586 55.381 2 0.1423891577203568 0.0007045974986788797 0.0036033115286268173 ['ENSG00000163655|ENST00000496455|GMPS'] 140677 14967 YRVFTTQEL True PC9_epitope_Rep4 1155.5924235730297 1155.5913299358601 65.509 2 0.14238356635027366 0.0007045974986788797 0.0036037754031252064 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 29558 21997 FVIDGFDEL True PC9_epitope_Rep4 1053.50187723313 1053.5007899358602 92.833 2 0.142379316947618 0.0007045974986788797 0.0036041279841702452 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 114588 13109 TQDGTPITV True PC9_epitope_Rep3 930.4658260775799 930.46472993586 55.446 2 0.14237817981748038 0.0007045974986788797 0.003604222339832244 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 26681 16329 FITDPVVL True H1975_Epitope_Rep2 902.51131971802 902.51077496793 68.027 1 0.1423747697175221 0.0007045974986788797 0.003604505314437429 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000418838.1_1_X:40219448-40219874:-|nuORF', 'ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 95629 15767 RYALQMEQL True PC9_epitope_Rep4 1150.5804789903398 1150.57938993586 68.57 2 0.14236589976446262 0.0007045974986788797 0.003605241458124051 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 77848 10974 NVELDPEIQ True NCI_RA007_Epitope_Rep5 1055.51350454599 1055.5124099358602 48.848 2 0.14236204752426546 0.0007045974986788797 0.003605561213413819 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 4628 9202 ALAAGGYDVEK True PC9_epitope_Rep5 1092.54513902744 1092.5440499358601 40.342 2 0.14236190945826963 0.0007045974986788797 0.0036055726741074444 ['ENSG00000184357|ENST00000331442|H1-5'] 20894 19069 EQLNGILLHL True PC9_epitope_Rep6 1148.65535818276 1148.6542699358602 85.992 2 0.14235255936835428 0.0007045974986788797 0.003606348898038152 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 107374 12986 SVLKSIQEV True PC9_epitope_Rep2 1001.57571087973 1001.5746099358599 55.239 2 0.14235020200813048 0.0007045974986788797 0.003606544627078254 ['ENSG00000039123|ENST00000230640|MTREX'] 32797 10197 GHFNSMVAL True NCI_RA007_Epitope_Rep3 974.4643866089399 974.46328993586 47.194 2 0.1423420781558719 0.0007045974986788797 0.003607219222398848 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 74681 12009 NGQDLGVAFK True PC9_epitope_Rep3 1047.5349086969097 1047.53380993586 51.218 2 0.14233838698797008 0.0007045974986788797 0.003607525774089851 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 84879 5852 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 27.523 2 0.14233719675467071 0.0007045974986788797 0.003607624628540268 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 109812 8458 TEEEQIAYA True H1975_Epitope_Rep2 1052.4662200003997 1052.4651299358602 37.486 2 0.14233247481207412 0.0007045974986788797 0.0036080168344741603 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 21775 16122 ERVPINDVL True PC9_epitope_Rep5 1053.58185888933 1053.5807699358602 67.003 2 0.14232674396181108 0.0007045974986788797 0.003608492897408175 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 36624 16696 GVIDGHIYAV True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 69.47 2 0.14232435369820592 0.0007045974986788797 0.003608691475526223 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.G429V|1|0.39|ENSG00000079999|chr19:10491616-10491616|C/A|missense_variant'] 88548 11602 QTDDPDVGLAY True H1975_Epitope_Rep2 1192.5247975056798 1192.52370993586 49.694 2 0.14232009610257537 0.0007045974986788797 0.0036090452145553435 ['nc|ENSG00000182871|P39060|COL18A1', 'nc|ENSG00000182871|P39060-1|COL18A1', 'ENSG00000182871|ENST00000651438|COL18A1'] 73237 13551 M[Oxidation]SDSYLPSYY True H1975_Epitope_Rep2 1240.4958062569601 1240.4952749679298 57.261 1 0.14231618819375758 0.0007045974986788797 0.0036093699304100375 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 22716 15538 ETSDIQIFY True H1975_Epitope_Rep2 1114.51825557326 1114.51714993586 64.922 2 0.14231136796361182 0.0007045974986788797 0.00360977049277442 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 26715 9024 FIVNTNVPR True H1975_Epitope_Rep3 1058.58727862294 1058.5861899358601 39.705 2 0.14230649853425262 0.0007045974986788797 0.0036101751883922746 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 18356 6623 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep5 1176.6060254122801 1176.6049299358601 32.138 2 0.14230642809911906 0.0007045974986788797 0.0036101810425480897 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 8099 6243 ATDYHVRVY True H1975_Epitope_Rep2 1122.5458077337798 1122.54415490379 28.969 3 0.14230369331253961 0.0007045974986788797 0.0036104083492759288 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 11959 11186 DHNGMLSV True PC9_epitope_Rep2 871.38580193507 871.38470993586 48.352 2 0.1422997095749617 0.0007045974986788797 0.0036107394902323633 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 53217 12249 KQFEGTVEI True PC9_epitope_Rep2 1049.53932537101 1049.53822993586 52.426 2 0.1422997022941254 0.0007045974986788797 0.0036107400954662563 ['ENSG00000139618|ENST00000380152|BRCA2'] 69254 12135 LTTEVHPEL True PC9_epitope_Rep2 1037.5393253710097 1037.53822993586 51.987 2 0.14229825331823573 0.0007045974986788797 0.00361086054645126 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3', 'ERGIC3|p.Y48C|1|0.27|ENSG00000125991|chr20:35542377-35542377|A/G|missense_variant'] 26171 5409 FHDESTQV True PC9_epitope_Rep3 961.41412485789 961.41302993586 25.879 2 0.1422948872955881 0.0007045974986788797 0.003611140373772236 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 33588 12117 GLFIIDDK True H1975_Epitope_Rep1 919.5014833103099 919.50038993586 51.622 2 0.14229122234206673 0.0007045974986788797 0.003611445076560373 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 25533 10612 FEIGGTIHP True H1975_Epitope_Rep3 969.49198125577 969.49088993586 45.887 2 0.14229055918275987 0.0007045974986788797 0.0036115002140887755 ['ENSG00000138678|ENST00000264409|GPAT3'] 3517 10446 AGLQFPVGR True NCI_RA007_Epitope_Rep1 943.5239500903898 943.52284993586 44.615 2 0.14228013247886703 0.0007045974986788797 0.0036123672388006086 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 7016 22974 AQMEVASFLL True PC9_epitope_Rep1 1107.56343194387 1107.5623299358601 93.17 2 0.14226955786915163 0.0007045974986788797 0.003613246773454646 ['ENST00000488829.1_1_9:89626569-89628063:+|nuORF', 'ENSG00000117399|ENST00000310955|CDC20'] 7996 7016 ATDINGDDY True H1975_Epitope_Rep2 982.3879696796998 982.3874249679301 31.912 1 0.14226764799838498 0.0007045974986788797 0.0036134056480708245 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 73314 8580 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46397496793 37.956 1 0.14224636663061485 0.0007045974986788797 0.0036151764301075684 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 18135 13639 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59674993586 57.485 2 0.14224163131691553 0.0007045974986788797 0.003615570563624821 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 45153 23106 IPNSIMTILEA True PC9_epitope_Rep5 1200.6424105405601 1200.6413099358601 93.864 2 0.14223927821658097 0.0007045974986788797 0.003615766434660227 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 4471 11496 AIVDKVPSV True PC9_epitope_Rep6 926.54368247546 926.54258993586 55.292 2 0.14223037737370503 0.0007045974986788797 0.0036165074321381357 ['ENSG00000181789|ENST00000314797|COPG1'] 138458 7829 YHNPTANSF True PC9_epitope_Rep2 1049.45665837621 1049.45556993586 35.484 2 0.14222745858530994 0.0007045974986788797 0.003616750454832783 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 138608 8041 YIDQEELNK True PC9_epitope_Rep5 1150.5506183307 1150.5495299358602 35.867 2 0.1422256805147446 0.0007045974986788797 0.003616898507593691 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 134800 18916 VYTVVDEMFL True NCI_RA007_Epitope_Rep3 1214.5893123385397 1214.58820993586 82.693 2 0.1422185344819624 0.0007045974986788797 0.0036174935895566356 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 8131 13769 ATEFIMNEY True H1975_Epitope_Rep2 1116.47976188956 1116.47917496793 58.108 1 0.14221439955424195 0.0007045974986788797 0.0036178379677624787 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 14966 12782 DYFEQYGK True PC9_epitope_Rep2 1048.4501760134401 1048.44906993586 54.469 2 0.14220624916467106 0.0007045974986788797 0.003618516869688021 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 141833 5598 YVDGVEVH True NCI_RA007_Epitope_Rep3 916.42904664604 916.4279499358599 29.013 2 0.1422021609951556 0.0007045974986788797 0.003618857449005985 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 40719 8215 HRTDSEIAL True PC9_epitope_Rep3 1040.5250722892 1040.5239699358601 36.578 2 0.14219891746232208 0.0007045974986788797 0.003619127685526081 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 133956 21715 VYILQPEVI True PC9_epitope_Rep3 1072.6168474157198 1072.61574993586 88.82 2 0.1421987241190177 0.0007045974986788797 0.0036191437946500923 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 7261 14733 ARDETEFYL True PC9_epitope_Rep6 1142.5244035828598 1142.5233099358602 68.62 2 0.1421805107543024 0.0007045974986788797 0.0036206616286333444 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 35980 5151 GTVIHFNNPK True NCI_RA007_Epitope_Rep3 1125.59309227937 1125.59143490379 27.253 3 0.14216649038429793 0.0007045974986788797 0.0036218304642553147 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 9459 5751 AVVGVVAGGGR True NCI_RA007_Epitope_Rep4 940.5454138109598 940.54430993586 28.74 2 0.14216616311374403 0.0007045974986788797 0.0036218577522773047 ['ENSG00000161016|ENST00000528957|RPL8'] 89689 12815 RAAEEFVNV True PC9_epitope_Rep1 1033.5192586327698 1033.5181699358602 54.167 2 0.1421644698544199 0.0007045974986788797 0.003621998940549067 ['ENSG00000132661|ENST00000254998|NXT1'] 75780 12344 NLLSVAYK True PC9_epitope_Rep6 906.5174677276199 906.51636993586 58.885 2 0.14216277942751246 0.0007045974986788797 0.00362213989809371 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 42506 11078 IEELEAVEA True H1975_Epitope_Rep2 1001.4917064722499 1001.4911749679301 47.644 1 0.1421579824802444 0.0007045974986788797 0.003622539924858783 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 22885 6798 EVDPNIQAVR True H1975_Epitope_Rep1 1139.5934862021898 1139.5923899358602 31.191 2 0.14215343498932395 0.0007045974986788797 0.0036229191894458852 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 77300 11437 NSDNNTIFV True H1975_Epitope_Rep3 1022.46688870674 1022.46578993586 49.111 2 0.14215206283125997 0.0007045974986788797 0.0036230336363252966 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 6946 14002 AQIKPFYTV True PC9_epitope_Rep6 1065.5858816406098 1065.58478993586 65.715 2 0.14215163527358063 0.0007045974986788797 0.003623069298140942 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 99733 21111 SIIDEFLHI True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 94.041 2 0.14214897285225178 0.0007045974986788797 0.003623291373743433 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 29921 12793 FVYDEPGHAV True PC9_epitope_Rep3 1132.5189242795998 1132.5178299358602 54.229 2 0.14214693071346785 0.0007045974986788797 0.0036234617200228414 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 33455 14488 GLAPPQHLIRV True PC9_epitope_Rep5 1199.71387611839 1199.71222490379 60.729 3 0.14214511595587262 0.0007045974986788797 0.0036236131058266594 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant'] 25381 11950 FEAPSPLGA True H1975_Epitope_Rep2 887.4388830537498 887.43833496793 51.044 1 0.14214433566353118 0.0007045974986788797 0.003623678199194768 ['ENST00000477110.6_1_X:295104-295341:-|nuORF', 'nc|ENSG00000292327|Q9Y5P8-2|PPP2R3B', 'ENSG00000167393|ENST00000390665|PPP2R3B'] 73334 9670 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4684899358601 42.177 2 0.1421437260657202 0.0007045974986788797 0.003623729053730259 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 118916 10268 VADLVENSY True H1975_Epitope_Rep3 1008.4763907612801 1008.47528993586 44.547 2 0.1421320018231899 0.0007045974986788797 0.003624707264097613 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 105059 15356 SRDPVQLNL True PC9_epitope_Rep3 1040.56145779792 1040.56036993586 64.223 2 0.14212818891773937 0.0007045974986788797 0.0036250254497284615 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 95754 10058 RYIANTVEL True NCI_RA007_Epitope_Rep2 1077.58185888933 1077.5807699358602 43.721 2 0.14212304096886846 0.0007045974986788797 0.003625455088232359 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 33566 10004 GLESDVAELR True H1975_Epitope_Rep3 1087.5509526838698 1087.54984993586 43.516 2 0.1421227614418283 0.0007045974986788797 0.003625478418499686 ['ENSG00000176619|ENST00000325327|LMNB2'] 12741 8616 DLEGLSQR True PC9_epitope_Rep2 916.46140940348 916.46030993586 38.503 2 0.14211391140169938 0.0007045974986788797 0.003626217149646007 ['ENSG00000100345|ENST00000216181|MYH9'] 104986 15963 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 66.209 2 0.1421117937730081 0.0007045974986788797 0.0036263939346319694 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 90870 5042 REVDPPM[Oxidation]GP True H1975_Epitope_Rep2 1012.4647809121999 1012.46368993586 24.476 2 0.14211013535822078 0.0007045974986788797 0.0036265323892530443 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 99048 16206 SHFSEEVLL True PC9_epitope_Rep4 1059.52367530687 1059.52256993586 70.281 2 0.14210738693899386 0.0007045974986788797 0.0036267618556669037 ['ENSG00000110628|ENST00000649076|SLC22A18'] 96217 15170 RYPTSIASL True PC9_epitope_Rep5 1006.5447451046199 1006.54364993586 63.36 2 0.14210674037658286 0.0007045974986788797 0.0036268158394655403 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 96237 10206 RYQDIIHSI True NCI_RA007_Epitope_Rep2 1143.6036569630699 1143.60254993586 44.287 2 0.14210475144771004 0.0007045974986788797 0.003626981907219499 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 38961 12555 HHIVSIEV True PC9_epitope_Rep3 932.50796567308 932.50686993586 53.313 2 0.142104546851804 0.0007045974986788797 0.0036269989906025125 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 54867 21615 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 88.182 2 0.14210412604920297 0.0007045974986788797 0.00362703412709907 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 1851 11898 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 50.766 1 0.14209544836160945 0.0007045974986788797 0.003627758778569073 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 442 17862 AALPNVYEV True PC9_epitope_Rep6 974.5072969667399 974.50618993586 81.334 2 0.14209123295016146 0.0007045974986788797 0.003628110848618921 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 47931 12773 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.6890249037901 54.435 3 0.14208719529696348 0.0007045974986788797 0.003628448104131391 ['ENSG00000103479|ENST00000262133|RBL2'] 34705 6935 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 33.906 2 0.14208389524874618 0.0007045974986788797 0.003628723772363251 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 68977 11384 LTPKLFHEV True PC9_epitope_Rep4 1082.6124307416198 1082.61132993586 51.561 2 0.14208339383445362 0.0007045974986788797 0.0036287656596276437 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 54774 15330 KYNANFVTF True PC9_epitope_Rep6 1102.54474510462 1102.54364993586 71.096 2 0.14208151841471975 0.0007045974986788797 0.003628922333132368 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 25536 7167 FEIIDDHRA True H1975_Epitope_Rep1 1114.54072235334 1114.5396299358601 32.589 2 0.14207975016315674 0.0007045974986788797 0.0036290700599011924 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000492525.1_1_8:29974982-29975219:-|nuORF', 'ENST00000406202.2_1_6:157297523-157298164:+|nuORF', 'RPS15A|p.G48R|1|0.21|ENSG00000134419|chr16:18788134-18788134|C/G|missense_variant'] 86842 14515 QLQGYLRSV True PC9_epitope_Rep5 1062.5821932425 1062.58108993586 60.831 2 0.1420745822041128 0.0007045974986788797 0.003629501845956204 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 60878 18966 LHYGLPVVV True PC9_epitope_Rep4 995.5804023373499 995.57930993586 81.042 2 0.14207272735885307 0.0007045974986788797 0.003629656831811148 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 45518 19125 IQPDNIVYV True PC9_epitope_Rep4 1059.56006081559 1059.5589699358602 81.657 2 0.1420718341563924 0.0007045974986788797 0.003629731467736002 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 105444 7275 SRTSIQSEL True PC9_epitope_Rep6 1019.52473793603 1019.52364993586 37.119 2 0.14206140875644702 0.0007045974986788797 0.003630602725916093 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 24260 18739 EYTAKIALL True PC9_epitope_Rep1 1020.5855472874399 1020.58444993586 76.869 2 0.14205987707878368 0.0007045974986788797 0.0036307307468006053 ['ENSG00000092820|ENST00000367075|EZR'] 104902 12752 SRDDNM[Oxidation]FQI True PC9_epitope_Rep5 1140.48697290876 1140.4858699358601 54.057 2 0.1420589746628338 0.0007045974986788797 0.003630806174746184 ['ENSG00000113387|ENST00000265073|SUB1'] 99601 4339 SIFEPAKGGEK True NCI_RA007_Epitope_Rep3 1161.6029882567298 1161.60133490379 23.816 3 0.142050970116792 0.0007045974986788797 0.003631475298423676 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 14119 15164 DSDAPLFY True H1975_Epitope_Rep3 926.4021631918599 926.4016149679301 63.73 1 0.14204705099104628 0.0007045974986788797 0.0036318029543473264 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 52540 12707 KLFDDKLQNC True PC9_epitope_Rep5 1222.60160835774 1222.59997490379 53.883 3 0.1420445105300062 0.0007045974986788797 0.0036320153635853083 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'ENST00000524620.1_1_1:52211285-52225200:+|nuORF', 'ENST00000484890.5_1_1:52211210-52222042:+|nuORF', 'ENST00000473207.6_1_1:52195646-52226369:+|nuORF'] 137407 5243 YEAPGVREA True H1975_Epitope_Rep3 990.4770594676198 990.47596993586 25.252 2 0.14204001969343277 0.0007045974986788797 0.003632390874862657 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 48294 9910 IYQRDPLKL True PC9_epitope_Rep6 1144.6604435631998 1144.65880490379 48.628 3 0.1420341364246469 0.0007045974986788797 0.003632882875735788 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 105166 11566 SRFPQGAQL True PC9_epitope_Rep5 1002.5246783663797 1002.52358993586 49.484 2 0.14203020151416818 0.0007045974986788797 0.0036332119778952196 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 107842 20349 SVVESVFKL True PC9_epitope_Rep1 1006.5698972232999 1006.56880993586 83.102 2 0.1420112641733648 0.0007045974986788797 0.003634796244640504 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 128841 16702 VQDEFLEKL True PC9_epitope_Rep6 1119.5811901829898 1119.58008993586 76.72 2 0.14200817410492836 0.0007045974986788797 0.003635054819708601 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 127533 12266 VNQIGSVTESL True NCI_RA007_Epitope_Rep2 1145.59281749585 1145.59172993586 52.313 2 0.14200717547405925 0.0007045974986788797 0.003635138388440777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 138979 5288 YKPLDLRPK True NCI_RA007_Epitope_Rep5 1128.6655289436399 1128.6638849037902 27.036 3 0.14200613015830593 0.0007045974986788797 0.0036352258659601115 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000373570.8_1_9:127620199-127620799:-|nuORF'] 93001 9206 RPKPSSSPVIF True PC9_epitope_Rep2 1213.68190728377 1213.68025490379 40.751 3 0.1420051401936757 0.0007045974986788797 0.0036353087133318613 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 108255 15416 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.57007496793 68.192 1 0.14200234978112755 0.0007045974986788797 0.0036355422452365852 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 98143 21551 SESPIVVVL True PC9_epitope_Rep1 941.5433481222899 941.54279496793 87.717 1 0.14199506688602953 0.0007045974986788797 0.0036361518267906618 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 82970 11640 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.47547496793 49.765 1 0.14199117613483214 0.0007045974986788797 0.0036364775259480958 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3'] 30593 18631 GAIPRLVQL True PC9_epitope_Rep2 965.6022004110898 965.60110993586 77.03 2 0.14198548209405992 0.0007045974986788797 0.0036369542326763504 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 140013 5272 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54488490379 25.295 3 0.14198090472851127 0.0007045974986788797 0.0036373374959845833 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 37108 11056 GVPSTAIREI True PC9_epitope_Rep6 1041.5818588893299 1041.5807699358602 53.44 2 0.1419802745538631 0.0007045974986788797 0.0036373902637131823 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 118932 15670 VADPYVVIM True NCI_RA007_Epitope_Rep5 1005.5205045027299 1005.51940993586 66.991 2 0.14197413234068818 0.0007045974986788797 0.003637904622240307 ['ENSG00000071894|ENST00000616140|CPSF1'] 134802 23317 VYTVVDEMFL True PC9_epitope_Rep1 1214.5893123385397 1214.58820993586 94.479 2 0.1419719225785145 0.0007045974986788797 0.003638089688826072 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 47529 17106 IVSNPVDILTY True H1975_Epitope_Rep1 1232.66525416012 1232.66414993586 71.228 2 0.14196575028396133 0.0007045974986788797 0.0036386066651922645 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 40273 17713 HQLESILAM True PC9_epitope_Rep4 1040.5324661687598 1040.53136993586 76.158 2 0.14196102912563022 0.0007045974986788797 0.003639002147112554 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 48321 20151 IYSAERFLI True PC9_epitope_Rep1 1110.60734536118 1110.6062499358602 82.341 2 0.14195877900432197 0.0007045974986788797 0.0036391906502455783 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 112101 19289 TIVNELVRV True PC9_epitope_Rep3 1041.61824439805 1041.6171499358602 79.416 2 0.14195673423073915 0.0007045974986788797 0.00363936195884531 ['ENSG00000171298|ENST00000302262|GAA'] 133696 9472 VYASDRATF True PC9_epitope_Rep5 1028.4927095317598 1028.4916099358602 41.391 2 0.14194365591441543 0.0007045974986788797 0.003640457833230583 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 38077 12072 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.44900993586 51.429 2 0.14193940093525007 0.0007045974986788797 0.003640814442257873 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 75076 9135 NHVASDISL True PC9_epitope_Rep6 954.47705946762 954.47596993586 45.244 2 0.1419347769632463 0.0007045974986788797 0.0036412020158003073 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 135165 20453 WEMDNMLIQI True H1975_Epitope_Rep3 1291.59408044915 1291.59298993586 85.507 2 0.1419317720663038 0.0007045974986788797 0.003641453903140392 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 78506 15873 NYPETLGRLLI True NCI_RA007_Epitope_Rep2 1287.7186867153098 1287.7175899358601 66.459 2 0.14192243681515726 0.0007045974986788797 0.0036422365466013194 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 89668 16433 QYVSAFSKL True PC9_epitope_Rep3 1041.54949613189 1041.54838993586 68.348 2 0.14192161100882558 0.0007045974986788797 0.00364230578811469 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 23953 16974 EYLLKVNEI True PC9_epitope_Rep6 1119.61757569171 1119.61646993586 77.835 2 0.14190510338708215 0.0007045974986788797 0.0036436901792544496 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 129934 11203 VRTPYTMSY True PC9_epitope_Rep6 1116.52738078832 1116.5262899358602 54.069 2 0.14190248617457887 0.0007045974986788797 0.003643909716457003 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 111016 10377 THDDSHLVSL True PC9_epitope_Rep3 1122.5305515924601 1122.5294499358602 44.857 2 0.1418984105070221 0.0007045974986788797 0.003644251618016467 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 24107 14891 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep1 1300.57578791316 1300.57468993586 62.098 2 0.14189709956282376 0.0007045974986788797 0.003644361597897872 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 48353 14459 IYSTKLYRF True PC9_epitope_Rep1 1189.6495445263297 1189.64788490379 60.44 3 0.14189656244462784 0.0007045974986788797 0.0036444066596496316 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 121841 10924 VFPEKGYSF True NCI_RA007_Epitope_Rep5 1072.5229470308798 1072.52184993586 48.659 2 0.1418883023943033 0.0007045974986788797 0.0036450997095797085 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 71703 7610 MEEEPTHLP True H1975_Epitope_Rep2 1081.4750108622898 1081.47390993586 34.224 2 0.1418854367851365 0.0007045974986788797 0.0036453401757347305 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 134938 10264 WADLGPDKY True H1975_Epitope_Rep2 1063.4974605590298 1063.49636993586 44.486 2 0.14188403521190251 0.0007045974986788797 0.0036454577937798877 ['nc|ENSG00000168297|Q7Z7A4-5|PXK', 'nc|ENSG00000168297|Q7Z7A4-7|PXK', 'nc|ENSG00000168297|Q7Z7A4-2|PXK', 'nc|ENSG00000168297|Q7Z7A4-6|PXK', 'nc|ENSG00000168297|Q7Z7A4-4|PXK', 'ENSG00000168297|ENST00000356151|PXK', 'PXK|p.L330Wfs*16|1|0.16|ENSG00000168297|chr3:58397608-58397608|T/-|frameshift_variant'] 48283 12580 IYQRDPLKL True PC9_epitope_Rep3 1144.6604435631998 1144.65880490379 53.412 3 0.14188312235791167 0.0007045974986788797 0.0036455344012212617 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 110610 17872 TFTFSHATF True PC9_epitope_Rep2 1057.4868958753298 1057.48578993586 74.047 2 0.14188045898694215 0.0007045974986788797 0.0036457579225830862 ['ENSG00000204713|ENST00000377199|TRIM27'] 42139 5023 IDNPTVDDR True NCI_RA007_Epitope_Rep2 1043.4883524273098 1043.48724993586 24.163 2 0.14187738758000965 0.0007045974986788797 0.0036460157049288786 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 62963 14420 LLPHVVPGTT True PC9_epitope_Rep1 1032.59678067748 1032.59568993586 60.291 2 0.14187695889167093 0.0007045974986788797 0.0036460516860621203 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 40165 20354 HQDSTWIVL True PC9_epitope_Rep1 1097.55055876105 1097.54946993586 83.122 2 0.14187268738862902 0.0007045974986788797 0.0036464102257164556 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 97258 12261 SEAEIFYNA True H1975_Epitope_Rep2 1042.46074069714 1042.4596499358602 52.246 2 0.1418708575110992 0.0007045974986788797 0.003646563831919979 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 132313 19947 VTYGFPIML True H1975_Epitope_Rep1 1039.5412399473098 1039.54067496793 83.02 1 0.14185918018266502 0.0007045974986788797 0.003647544218161386 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF', 'CLCN7|p.N576I|1|0.15|ENSG00000103249|chr16:1449036-1449036|T/A|missense_variant'] 120439 3659 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 19.118 2 0.14185761778577072 0.0007045974986788797 0.0036476754111820814 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 9039 11962 AVHEDIVAV True PC9_epitope_Rep5 951.5025459394699 951.50144993586 51.008 2 0.14185761023071494 0.0007045974986788797 0.0036476760455844905 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 121377 6144 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 28.607 2 0.14185444768936306 0.0007045974986788797 0.0036479416156267007 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 134158 13970 VYLPGSRQTL True PC9_epitope_Rep3 1132.62405805448 1132.62296993586 58.81 2 0.14185342701880432 0.0007045974986788797 0.0036480273291211317 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 27779 21173 FQAEIAQLM True PC9_epitope_Rep2 1049.52156713189 1049.52046993586 86.897 2 0.1418532333869748 0.0007045974986788797 0.0036480435900887002 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 11600 21005 DGFLSELTQQL True H1975_Epitope_Rep1 1249.6190322436898 1249.61792993586 87.241 2 0.14184864902138075 0.0007045974986788797 0.0036484286005876426 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 28924 21130 FTDLFDYL True H1975_Epitope_Rep1 1032.4804135125598 1032.4798749679298 87.778 1 0.1418475350041891 0.0007045974986788797 0.0036485221655996997 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 41317 8345 HVVFIAQR True PC9_epitope_Rep5 968.55558457184 968.55448993586 37.039 2 0.14184215207051729 0.0007045974986788797 0.0036489743054961593 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 97273 11502 SEAFSINFR True H1975_Epitope_Rep3 1069.51925863277 1069.5181699358602 49.367 2 0.14183996691474432 0.0007045974986788797 0.003649157863671531 ['CON__P34955'] 108355 21508 SYLDSVHFF True PC9_epitope_Rep5 1113.51311062317 1113.51200993586 87.766 2 0.14183057651557385 0.0007045974986788797 0.0036499467833422585 ['ENSG00000100393|ENST00000263253|EP300'] 9954 23532 AYNDNWFITF True PC9_epitope_Rep2 1289.57168812845 1289.5705899358602 95.991 2 0.1418292652372816 0.0007045974986788797 0.003650056961794813 ['ENSG00000107929|ENST00000316157|LARP4B'] 37107 13109 GVPSTAIREI True PC9_epitope_Rep5 1041.5818588893299 1041.5807699358602 55.428 2 0.14182903665517582 0.0007045974986788797 0.003650076168446558 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 86151 11146 QIDPTIQRV True PC9_epitope_Rep3 1068.5927579262 1068.5916699358602 47.872 2 0.14182818149164314 0.0007045974986788797 0.003650148024602322 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 41748 4631 IANPVEGSSGR True H1975_Epitope_Rep3 1085.5465360097699 1085.54542993586 22.936 2 0.14182196571286826 0.0007045974986788797 0.003650670355141588 ['ENSG00000169564|ENST00000303577|PCBP1'] 142729 16109 YYQGGKFQF True PC9_epitope_Rep5 1136.52909504048 1136.5279899358602 66.953 2 0.14181753335989347 0.0007045974986788797 0.0036510428643462276 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 99599 7632 SIFDGRVVAK True NCI_RA007_Epitope_Rep5 1090.61349337078 1090.6123899358602 36.059 2 0.1418171323252713 0.0007045974986788797 0.0036510765704462194 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 41437 19156 HYILHNSFF True PC9_epitope_Rep3 1176.5716285587998 1176.5705299358601 78.904 2 0.1418169730635453 0.0007045974986788797 0.003651089956138392 ['ENSG00000163659|ENST00000295924|TIPARP'] 119353 9647 VAPEEHPVLL True H1975_Epitope_Rep3 1102.60225998074 1102.60116993586 42.123 2 0.14181533033288166 0.0007045974986788797 0.0036512280278519185 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 17936 12520 EIAQEFKTDLR True PC9_epitope_Rep5 1348.6986795467199 1348.6970249037902 53.158 3 0.14181188623533844 0.0007045974986788797 0.003651517521485724 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 68100 13597 LTDPAIVKV True PC9_epitope_Rep2 954.57498260374 954.57388993586 57.59 2 0.14180633115576863 0.0007045974986788797 0.0036519845017027397 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 48104 19527 IYNGKLFDLL True PC9_epitope_Rep6 1194.6648602373 1194.66376993586 87.774 2 0.1418032708081751 0.0007045974986788797 0.0036522417909731412 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 76629 19729 NQQLPIESQMV True PC9_epitope_Rep5 1285.63363676201 1285.63252993586 80.934 2 0.14180227850649516 0.0007045974986788797 0.0036523252195318975 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 84460 6352 QAIATREEL True NCI_RA007_Epitope_Rep4 1029.5454733806098 1029.54436993586 31.039 2 0.14180072689590567 0.0007045974986788797 0.0036524556762244603 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000485975.1_1_9:139261944-139262364:-|nuORF', 'ENST00000481053.5_1_9:139259475-139262364:-|nuORF', 'ENST00000489932.2_1_9:139258756-139262364:-|nuORF'] 31674 9841 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51676993586 45.782 2 0.1417932060974158 0.0007045974986788797 0.0036530880772539416 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 96199 12424 RYPSNLQLF True NCI_RA007_Epitope_Rep3 1136.59784330664 1136.59674993586 56.083 2 0.1417874638223774 0.0007045974986788797 0.0036535710007897064 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 3929 11513 AHDDSVM[Oxidation]YL True PC9_epitope_Rep5 1065.44371111445 1065.4426099358602 49.281 2 0.14178430790973803 0.0007045974986788797 0.003653836439021917 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 89876 7079 RAYADEVAV True NCI_RA007_Epitope_Rep4 992.4927095317598 992.49160993586 33.853 2 0.14178084390470627 0.0007045974986788797 0.0036541278123825055 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 99268 18254 SHQLDFNVL True PC9_epitope_Rep4 1071.53490869691 1071.53380993586 78.286 2 0.14178069241705793 0.0007045974986788797 0.003654140555229836 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 27785 21372 FQAEIAQLM True PC9_epitope_Rep5 1049.52156713189 1049.52046993586 87.269 2 0.14177729851598614 0.0007045974986788797 0.0036544260551658637 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 1914 5037 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5965849037902 24.457 3 0.14177597293746752 0.0007045974986788797 0.003654537570783845 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 2493 3846 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 19.82 2 0.14177159738663517 0.0007045974986788797 0.003654905692332764 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 139499 15998 YLSEEVQAV True PC9_epitope_Rep5 1036.5076908895599 1036.5065899358601 66.526 2 0.14176515444337853 0.0007045974986788797 0.0036554478136156462 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000496047.5_1_2:85872080-85873002:+|nuORF'] 40473 5773 HRDGALTQL True PC9_epitope_Rep4 1009.53049202281 1009.52938993586 29.058 2 0.14175880148910852 0.0007045974986788797 0.003655982441157726 ['ENSG00000127948|ENST00000461988|POR'] 71851 15250 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51432993586 63.817 2 0.14175626712386608 0.0007045974986788797 0.0036561957401826067 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 16079 9099 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.6086049037901 39.394 3 0.14175539724574474 0.0007045974986788797 0.0036562689543206584 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 137776 7133 YEQAARVAI True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 32.37 2 0.14175536582242637 0.0007045974986788797 0.0036562715991220254 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 86045 9294 QHQSGIVQL True PC9_epitope_Rep4 1008.5352430500798 1008.53414993586 43.356 2 0.1417538276013521 0.0007045974986788797 0.00365640106864715 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 140004 18861 YQDPVTLQL True PC9_epitope_Rep6 1075.55497543515 1075.5538699358601 85.198 2 0.1417502722271114 0.0007045974986788797 0.0036567003360232983 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 91407 16711 RHIEIFTDL True PC9_epitope_Rep2 1142.6084079903399 1142.6067749037902 69.526 3 0.14174831695236007 0.0007045974986788797 0.003656864928193155 ['ENSG00000079246|ENST00000392132|XRCC5'] 31748 7578 GEHGLIIRV True NCI_RA007_Epitope_Rep3 992.57671393924 992.57560993586 36.938 2 0.14174628226669947 0.0007045974986788797 0.0036570362128598077 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 121793 16582 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 68.608 2 0.1417460106581909 0.0007045974986788797 0.0036570590781105743 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 99300 18497 SHSDYLLTI True PC9_epitope_Rep2 1047.52367530687 1047.52256993586 76.484 2 0.14174361224031848 0.0007045974986788797 0.0036572609940894894 ['ENSG00000120833|ENST00000551556|SOCS2'] 112182 7215 TKFETEQAL True NCI_RA007_Epitope_Rep4 1065.5342399905699 1065.5331499358601 34.386 2 0.14174299865887643 0.0007045974986788797 0.0036573126515422804 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 140729 13702 YSDAFLNDSY True H1975_Epitope_Rep2 1193.48768372097 1193.4865899358601 57.847 2 0.14174166891708342 0.0007045974986788797 0.0036574246050553407 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 16272 8255 EEFDAITKA True NCI_RA007_Epitope_Rep3 1022.4920408254198 1022.4909499358599 39.6 2 0.14173419822152353 0.0007045974986788797 0.0036580536404495615 ['ENSG00000112210|ENST00000468148|RAB23'] 62477 20775 LLIENVASL True PC9_epitope_Rep4 970.5698972232999 970.5693449679301 88.06 1 0.14173267153149502 0.0007045974986788797 0.003658182201533377 ['nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1', 'ENST00000388829.3_1_X:13397321-13397372:-|nuORF', 'ENST00000419783.1_2_3:49395567-49395990:-|nuORF'] 73338 9627 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4684899358601 42.046 2 0.1417251308355511 0.0007045974986788797 0.003658817261952086 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 10193 18920 AYYPAQGVQQF True PC9_epitope_Rep5 1270.59823722946 1270.5971499358602 77.797 2 0.14172479763015813 0.0007045974986788797 0.00365884532628211 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 122992 12255 VGIDIFTGK True H1975_Epitope_Rep3 948.52803241132 948.52692993586 52.316 2 0.14172317622903363 0.0007045974986788797 0.003658981892354194 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 18369 9081 EITALAPSTMK True NCI_RA007_Epitope_Rep1 1160.61111041228 1160.61000993586 39.323 2 0.14172049992469354 0.0007045974986788797 0.0036592073210281566 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 41120 17190 HTVGELIEV True PC9_epitope_Rep1 995.5287606873098 995.52821496793 70.942 1 0.14171018777152858 0.0007045974986788797 0.0036600760562198304 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 7237 22293 ARDEIIWLL True PC9_epitope_Rep5 1127.63389446219 1127.63278993586 90.757 2 0.14170615887951446 0.0007045974986788797 0.0036604155210554117 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 95785 20381 RYIDRIHIFF True PC9_epitope_Rep5 1378.7509899031 1378.74934490379 83.431 3 0.14170378053142263 0.0007045974986788797 0.003660615929654679 ['ENSG00000174231|ENST00000304992|PRPF8'] 76894 8805 NRDMTTAEI True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 38.71 2 0.1416941226960421 0.0007045974986788797 0.003661429847204168 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'nc|ENSG00000068885|Q9P2H3-2|IFT80', 'ENSG00000068885|ENST00000326448|IFT80'] 48161 12942 IYPPKLHQF True PC9_epitope_Rep3 1141.62841515893 1141.62676490379 54.804 3 0.14169391418793031 0.0007045974986788797 0.003661447421279693 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 112618 12129 TLETVPLER True PC9_epitope_Rep3 1056.5815245361598 1056.5804299358601 51.696 2 0.14168378232325907 0.0007045974986788797 0.003662301484823768 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 76833 9692 NRAQIQTVI True PC9_epitope_Rep4 1041.59309227937 1041.59198993586 44.914 2 0.14168085019658427 0.0007045974986788797 0.0036625486847323887 ['ENSG00000114030|ENST00000344337|KPNA1'] 88962 19289 QVIEELFKA True PC9_epitope_Rep2 1075.5913609438699 1075.59026993586 79.569 2 0.141669547233835 0.0007045974986788797 0.0036635017627540158 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 111901 13907 TIPEAFRGV True PC9_epitope_Rep4 988.5341804209198 988.53308993586 61.397 2 0.14166690184564432 0.0007045974986788797 0.0036637248602654614 ['ENSG00000213719|ENST00000375784|CLIC1'] 118215 13836 TYKVISNEF True PC9_epitope_Rep2 1099.5549754351498 1099.5538699358601 58.504 2 0.14166565395845473 0.0007045974986788797 0.003663830104895359 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 133344 19139 VVVDPIQSV True PC9_epitope_Rep5 954.53859709502 954.53750993586 78.653 2 0.1416547188558974 0.0007045974986788797 0.0036647524806638133 ['ENSG00000115233|ENST00000409682|PSMD14'] 92289 23083 RLLDVLAPLVL True PC9_epitope_Rep2 1220.7856440763198 1220.78454993586 94.28 2 0.14165103407484525 0.0007045974986788797 0.003665063343781218 ['ENSG00000182871|ENST00000651438|COL18A1'] 6627 15714 APWKPTWPA True PC9_epitope_Rep6 1052.5443511817998 1052.54324993586 72.662 2 0.1416498770142487 0.0007045974986788797 0.003665160963515384 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23', 'PRSS23|p.A166Qfs*19|1|0.13|ENSG00000150687|chr11:86808138-86808138|G/-|frameshift_variant'] 85735 10368 QHDDQQPVVL True PC9_epitope_Rep1 1177.5727507576098 1177.57164993586 44.764 2 0.14164972413210877 0.0007045974986788797 0.003665173862180402 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 90560 8930 REMEENFAV True H1975_Epitope_Rep2 1123.49680893603 1123.49570993586 39.309 2 0.14164597665301787 0.0007045974986788797 0.0036654900510428904 ['ENSG00000026025|ENST00000544301|VIM'] 39093 7995 HHTTQQTFL True PC9_epitope_Rep3 1111.54105670651 1111.53994993586 35.731 2 0.14164487286498345 0.0007045974986788797 0.0036655831869361805 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 44030 18821 IIIPEIQKV True PC9_epitope_Rep2 1051.66413196131 1051.66302993586 77.765 2 0.14164306119498069 0.0007045974986788797 0.0036657360578814455 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 77541 11152 NTDLGNDLY True H1975_Epitope_Rep2 1023.4509042894299 1023.4498099358599 47.933 2 0.14163955889071028 0.0007045974986788797 0.003666031604556788 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 41618 17196 IADSNYNWFY True H1975_Epitope_Rep2 1291.55095268387 1291.54984993586 71.433 2 0.14163697115415658 0.0007045974986788797 0.0036662499893831504 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant', 'DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE'] 125987 13509 VLDPYLLKY True H1975_Epitope_Rep1 1122.63249747986 1122.6319749679299 57.082 1 0.1416271672321494 0.0007045974986788797 0.0036670774811581723 ['ENSG00000239789|ENST00000285298|MRPS17'] 35253 6731 GRDENSVEL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 31.3 2 0.14162338998107185 0.0007045974986788797 0.003667396346286414 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 6949 4970 AQITATIAK True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 26.545 2 0.1416224088907064 0.0007045974986788797 0.0036674791717308994 ['nc|ENSG00000011566|Q8IVH8-3|MAP4K3', 'nc|ENSG00000011566|Q8IVH8-2|MAP4K3', 'ENSG00000011566|ENST00000263881|MAP4K3', 'MAP4K3|p.G190Vfs*16|1|0.08|ENSG00000011566|chr2:39326239-39326239|C/-|frameshift_variant'] 17336 17688 EHASSLLEL True PC9_epitope_Rep1 997.5080252427299 997.50692993586 72.831 2 0.14161510449392295 0.0007045974986788797 0.0036680958806090107 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 65364 7912 LRDQSAVVV True PC9_epitope_Rep2 985.5556441414899 985.55454993586 35.798 2 0.14161034724316457 0.0007045974986788797 0.003668497589726356 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 137589 8336 YEEQPGLQP True H1975_Epitope_Rep2 1059.4872897981497 1059.48618993586 37.017 2 0.14160825168922606 0.0007045974986788797 0.003668674555167942 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 26194 21281 FHDHALMIIF True PC9_epitope_Rep1 1242.6219498795 1242.6208499358602 86.683 2 0.1416022409551273 0.0007045974986788797 0.0036691821969115014 ['ENSG00000198712|ENST00000361739|MT-CO2'] 28404 12853 FRYTAGTPY True PC9_epitope_Rep1 1074.5134449763398 1074.5123499358601 54.313 2 0.1416004516491363 0.0007045974986788797 0.003669333327752291 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 140180 14172 YQTEIGQTL True PC9_epitope_Rep6 1051.51858992643 1051.51748993586 66.386 2 0.141599692311781 0.0007045974986788797 0.003669397465821757 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 105485 9453 SRYDGQIAV True PC9_epitope_Rep2 1007.5036085686297 1007.50250993586 41.699 2 0.14159965078913414 0.0007045974986788797 0.003669400973099169 ['ENSG00000182179|ENST00000333486|UBA7'] 3925 11428 AHDDSVM[Oxidation]YL True PC9_epitope_Rep1 1065.44371111445 1065.4426099358602 48.836 2 0.14159324517643634 0.0007045974986788797 0.0036699420733431916 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 88132 6101 QRSGNVAEL True PC9_epitope_Rep1 972.4988575413598 972.49776993586 28.282 2 0.14159271478120328 0.0007045974986788797 0.003669986880878227 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 128870 12846 VQDRFEVNV True PC9_epitope_Rep4 1104.55637241748 1104.55526993586 57.277 2 0.14158064736216 0.0007045974986788797 0.003671006477280199 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 130110 6268 VSDPSSPQY True H1975_Epitope_Rep3 978.42944056886 978.4288949679301 29.118 1 0.14157679229238626 0.0007045974986788797 0.0036713322577782183 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 104040 4554 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 22.61 2 0.14156901833394067 0.0007045974986788797 0.0036719892991396445 ['ENSG00000130935|ENST00000253247|NOL11'] 99358 15177 SHTDVVPVF True PC9_epitope_Rep4 999.50254593947 999.50144993586 66.304 2 0.1415661138967108 0.0007045974986788797 0.0036722348070164948 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 19776 4760 ELSEQIQR True NCI_RA007_Epitope_Rep5 1001.51417325233 1001.51306993586 24.993 2 0.14155995310042002 0.0007045974986788797 0.0036727556241080705 ['ENSG00000092820|ENST00000367075|EZR'] 105005 15788 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 65.72 3 0.14155583588630063 0.0007045974986788797 0.003673103723118018 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 137462 13835 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.47002496793 58.524 1 0.14155555362258693 0.0007045974986788797 0.0036731275889290245 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 29927 16150 FVYENPISL True H1975_Epitope_Rep2 1080.54916177872 1080.5485749679299 67.333 1 0.14155492103443545 0.0007045974986788797 0.0036731810757436698 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 25491 13925 FEFGVDPSA True H1975_Epitope_Rep2 967.4287122928698 967.42760993586 58.71 2 0.1415525562616652 0.0007045974986788797 0.0036733810296797347 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 138369 15206 YHGAEIVSL True PC9_epitope_Rep5 987.50254593947 987.50144993586 63.499 2 0.14155254205657353 0.0007045974986788797 0.0036733822308273305 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 41190 7646 HVIETLIGK True NCI_RA007_Epitope_Rep1 1008.5967806774798 1008.59568993586 33.735 2 0.14154507212459536 0.0007045974986788797 0.003674013923861221 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 47376 19864 IVIGVLHQL True PC9_epitope_Rep3 990.6226015025 990.62150993586 81.643 2 0.14153221474427327 0.0007045974986788797 0.003675101457523462 ['nc|ENSG00000108788|Q9UH92|MLX', 'nc|ENSG00000108788|Q9UH92-2|MLX', 'ENSG00000108788|ENST00000435881|MLX', 'ENST00000585403.5_1_17:40721871-40723618:+|nuORF'] 38367 2742 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 14.592 2 0.1415316847763941 0.0007045974986788797 0.003675146291383785 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 73316 9105 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 39.975 2 0.14153018175899137 0.0007045974986788797 0.0036752734455733423 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 141036 21055 YSLEKVFGI True PC9_epitope_Rep5 1054.5698972233 1054.5688099358601 86.048 2 0.1415286422010699 0.0007045974986788797 0.003675403695588252 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 140093 19937 YQLPEILRT True PC9_epitope_Rep1 1131.6288090817498 1131.6277099358601 81.508 2 0.14152615911236852 0.0007045974986788797 0.003675613780046753 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 15248 12092 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 51.525 2 0.14152605150619582 0.0007045974986788797 0.0036756228844549302 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 10031 8036 AYRQGHFTY True PC9_epitope_Rep5 1141.53049202281 1141.52884490379 35.848 3 0.14151755532126592 0.0007045974986788797 0.003676341805417586 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 104941 18649 SRDELLQVL True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 79.81 2 0.141517498609613 0.0007045974986788797 0.003676346604651273 ['ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'ENSG00000187446|ENST00000334660|CHP1'] 54458 10560 KYGNANVW True PC9_epitope_Rep1 950.46101548066 950.45990993586 45.51 2 0.14151629514498418 0.0007045974986788797 0.003676448449523897 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 104550 13828 SQPPVQVSV True PC9_epitope_Rep1 939.5025459394699 939.50144993586 58.032 2 0.14150713591058148 0.0007045974986788797 0.003677223654206107 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 8082 8118 ATDTASGTGLY True H1975_Epitope_Rep2 1055.4771190372699 1055.47657496793 36.175 1 0.14149941345161704 0.0007045974986788797 0.003677877381344598 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 8994 8812 AVGLVLPAK True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 40.561 2 0.14149856342399633 0.0007045974986788797 0.003677949345534482 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 108114 19712 SYDPDFNQL True PC9_epitope_Rep1 1097.46655435357 1097.46544993586 80.648 2 0.14149509054275775 0.0007045974986788797 0.0036782433776482684 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 24285 11685 EYTPRSWNF True NCI_RA007_Epitope_Rep4 1198.54072235334 1198.5396299358601 51.905 2 0.1414895655136969 0.0007045974986788797 0.003678711203274902 ['ENSG00000156671|ENST00000542569|SAMD8'] 43683 17440 IHDGMNLEL True PC9_epitope_Rep3 1040.49608066004 1040.49498993586 72.256 2 0.1414852290955558 0.0007045974986788797 0.0036790784259430574 ['ENSG00000198258|ENST00000586895|UBL5'] 6738 10198 AQASDLEKI True PC9_epitope_Rep5 973.50802524273 973.50692993586 44.216 2 0.14148198781572527 0.0007045974986788797 0.003679352932310031 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 7585 3066 ASFDKAKLK True NCI_RA007_Epitope_Rep3 1006.58113061334 1006.58002993586 17.148 2 0.14147751654716753 0.0007045974986788797 0.003679731640664247 ['ENSG00000034510|ENST00000233143|TMSB10'] 10094 18974 AYTPFHAVL True PC9_epitope_Rep3 1017.5283667644899 1017.52726993586 78.206 2 0.14147496845305543 0.0007045974986788797 0.003679947476916952 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 134452 12238 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 52.384 2 0.1414683869290382 0.0007045974986788797 0.0036805050228575728 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 103578 7829 SPSPPFGHSA True PC9_epitope_Rep3 982.4508447197801 982.44974993586 35.103 2 0.14146824235743058 0.0007045974986788797 0.00368051727100885 ['ENSG00000141232|ENST00000499247|TOB1'] 130167 10487 VSEDSSVTQIY True H1975_Epitope_Rep3 1226.56666231766 1226.56607496793 45.402 1 0.14146758234092202 0.0007045974986788797 0.0036805731883249853 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 129932 11936 VRTPYTMSY True PC9_epitope_Rep4 1116.52738078832 1116.5262899358602 53.702 2 0.14146682734396043 0.0007045974986788797 0.00368063715352153 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 71723 10187 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 44.187 1 0.14146000437633874 0.0007045974986788797 0.0036812152620982214 ['ENSG00000026025|ENST00000544301|VIM'] 1274 4479 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 22.341 2 0.14145383661477526 0.0007045974986788797 0.003681737932705806 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 2860 5666 AEVETRIEA True H1975_Epitope_Rep1 1016.5138388991599 1016.51274993586 26.864 2 0.1414499481052093 0.0007045974986788797 0.003682067491971102 ['ENSG00000112685|ENST00000230449|EXOC2'] 36369 12316 GVFEYFNAK True NCI_RA007_Epitope_Rep5 1073.5181960036098 1073.5170899358602 54.024 2 0.14144787423377125 0.0007045974986788797 0.0036822432688473038 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 75828 17905 NLPDEIYHV True PC9_epitope_Rep3 1098.5345743437401 1098.53346993586 74.073 2 0.14144364682226418 0.0007045974986788797 0.0036826016009142127 ['ENSG00000148335|ENST00000372483|NTMT1'] 59316 16932 LFIATSQKF True PC9_epitope_Rep1 1053.58588164061 1053.58478993586 69.952 2 0.14143854451152849 0.0007045974986788797 0.0036830341389501695 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 87747 10197 QRATIDPEL True PC9_epitope_Rep4 1041.5454733806098 1041.54436993586 46.899 2 0.14143771947898018 0.0007045974986788797 0.003683104084141976 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1'] 115000 16890 TRAEWMIAA True PC9_epitope_Rep1 1047.5171504577897 1047.51604993586 69.792 2 0.14143724441910335 0.0007045974986788797 0.0036831443597012685 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 17475 14213 EHFNGVAEL True PC9_epitope_Rep3 1014.4770594676198 1014.47596993586 59.757 2 0.1414296323134383 0.0007045974986788797 0.0036837897733231913 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B'] 33139 12425 GISRQGIIAV True PC9_epitope_Rep4 1012.6029286870798 1012.60182993586 55.597 2 0.14142712376659847 0.0007045974986788797 0.0036840024920397592 ['ENSG00000005100|ENST00000225296|DHX33'] 25982 7095 FGEEAEEEA True H1975_Epitope_Rep3 1009.3876353265298 1009.3870749679301 32.26 1 0.141422412398283 0.0007045974986788797 0.003684402037626019 ['ENSG00000196230|ENST00000327892|TUBB', 'ENST00000427668.1_1_1:53461605-53461695:+|nuORF'] 118287 15978 TYLPTSPLL True NCI_RA007_Epitope_Rep4 1003.55899818643 1003.55790993586 69.331 2 0.1414164480769966 0.0007045974986788797 0.0036849079009955727 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 53157 16201 KQADPFASL True PC9_epitope_Rep3 975.5025459394699 975.50144993586 67.456 2 0.1414145191510997 0.0007045974986788797 0.003685071517411304 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 98061 8341 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 37.036 2 0.14141407713383425 0.0007045974986788797 0.003685109011458134 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 34638 17305 GQAFVIFK True PC9_epitope_Rep1 908.5119884243599 908.51088993586 71.379 2 0.14141114684836448 0.0007045974986788797 0.0036853575820422492 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 34650 14751 GQASLGVIKV True PC9_epitope_Rep5 970.58113061334 970.58002993586 61.739 2 0.14140939300094837 0.0007045974986788797 0.003685506365562034 ['ENSG00000173145|ENST00000371361|NOC3L'] 113645 16567 TLVYHVVGV True PC9_epitope_Rep1 985.5596668927699 985.55856993586 68.548 2 0.14140244001550348 0.0007045974986788797 0.003686096264349429 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 95876 19837 RYLDEINLL True PC9_epitope_Rep4 1147.62372370131 1147.62262993586 84.434 2 0.1413992132906707 0.0007045974986788797 0.0036863700549766955 ['ENSG00000060558|ENST00000262958|GNA15'] 8498 4349 ATSDMDIGK True NCI_RA007_Epitope_Rep4 936.4222470134399 936.42114993586 23.074 2 0.14139883386699323 0.0007045974986788797 0.0036864022507566456 ['ENSG00000102158|ENST00000618282|MAGT1'] 68062 16418 LTDLVDDNYF True H1975_Epitope_Rep2 1213.5502839775302 1213.54977496793 68.372 1 0.1413944977901285 0.0007045974986788797 0.00368677020589269 ['ENSG00000174231|ENST00000304992|PRPF8'] 21131 5900 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 28.09 2 0.14138846266239333 0.0007045974986788797 0.0036872824014122694 ['ENSG00000092148|ENST00000399332|HECTD1'] 54970 9231 KYQEVTNNL True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 40.448 2 0.14138174334333226 0.0007045974986788797 0.003687852746621129 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 134566 20717 VYSEVAAYEF True PC9_epitope_Rep1 1176.5339056373998 1176.53280993586 84.513 2 0.14137954056725252 0.0007045974986788797 0.003688039740380556 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 78667 14217 NYVQAVEEF True NCI_RA007_Epitope_Rep5 1097.5029398622898 1097.50184993586 61.377 2 0.14137551188211492 0.0007045974986788797 0.003688381759967014 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 133711 19951 VYDGKFAIF True PC9_epitope_Rep2 1058.54368247546 1058.5425899358602 82.141 2 0.1413652394095831 0.0007045974986788797 0.0036892539950127362 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'nc|ENSG00000065361|P21860-2|ERBB3'] 1966 8747 AEIPEEHIP True H1975_Epitope_Rep3 1033.50802524273 1033.5069299358602 38.649 2 0.14136420240170183 0.0007045974986788797 0.0036893420586585615 ['ENSG00000198218|ENST00000395443|QRICH1'] 71201 19364 LYPDHFHLL True PC9_epitope_Rep3 1153.59202965021 1153.5903749037902 79.707 3 0.14135721448967992 0.0007045974986788797 0.0036899355328163966 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 104774 15137 SQWSLQHEI True PC9_epitope_Rep2 1126.54072235334 1126.5396299358601 63.484 2 0.1413569529669874 0.0007045974986788797 0.0036899577454318554 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 863 11072 [Acetylation]-ADFDTYDDR True H1975_Epitope_Rep3 1158.4465475012798 1158.44544993586 47.68 2 0.14135671790377352 0.0007045974986788797 0.003689977710805881 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF', 'nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H'] 133959 21753 VYILQPEVI True PC9_epitope_Rep5 1072.6168474157198 1072.61627496793 88.701 1 0.1413562044534195 0.0007045974986788797 0.0036900213216957962 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 2169 5206 AELSEGQVR True PC9_epitope_Rep3 987.49852318819 987.4974299358599 25.106 2 0.14135556110033856 0.0007045974986788797 0.0036900759668443083 ['ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1'] 111303 11853 THMPSVVGV True PC9_epitope_Rep4 925.4691376362099 925.46804993586 53.369 2 0.14135553195405967 0.0007045974986788797 0.0036900784424910575 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 90439 8218 REIQEAIAVA True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 36.554 2 0.14135200182087493 0.0007045974986788797 0.0036903782995612003 ['ENSG00000198218|ENST00000395443|QRICH1'] 88608 12949 QTDQMVFNAY True H1975_Epitope_Rep3 1215.52302368387 1215.5224749679298 55.04 1 0.14135028054722068 0.0007045974986788797 0.0036905245169941603 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 114564 20049 TQDAVPLTL True PC9_epitope_Rep3 956.51786165044 956.51731496793 82.368 1 0.141348241280505 0.0007045974986788797 0.003690697754493174 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 114603 8948 TQDPTVTRL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 39.261 2 0.1413473077726601 0.0007045974986788797 0.0036907770594955167 ['ENSG00000130827|ENST00000369682|PLXNA3'] 86110 15224 QHVPGSPFSV True PC9_epitope_Rep3 1053.52434401321 1053.5232499358601 63.705 2 0.14133787075176452 0.0007045974986788797 0.0036915788648165192 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 70046 11285 LVNELTEFAK True H1975_Epitope_Rep3 1162.6233893481399 1162.6228749679299 48.514 1 0.1413371501560693 0.0007045974986788797 0.0036916400964761157 ['CON__P02769'] 77327 13567 NSDVSLLNY True H1975_Epitope_Rep2 1023.48728979815 1023.4861899358599 57.322 2 0.14132511777886686 0.0007045974986788797 0.003692662680543909 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 67979 13100 LTDEQLLY True H1975_Epitope_Rep2 993.50187723313 993.50078993586 55.514 2 0.14131342044457956 0.0007045974986788797 0.003693657059925031 ['ENSG00000197081|ENST00000356956|IGF2R'] 104042 4737 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 23.311 2 0.14131261202861584 0.0007045974986788797 0.0036937257924150664 ['ENSG00000130935|ENST00000253247|NOL11'] 38815 14456 HHALPITDL True PC9_epitope_Rep1 1015.54507945779 1015.5439899358599 60.429 2 0.14130645963208976 0.0007045974986788797 0.0036942489180699666 ['ENSG00000065268|ENST00000585809|WDR18'] 131033 4921 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 24.011 3 0.1413049886775565 0.0007045974986788797 0.0036943740011990407 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 134378 20874 VYPEYVIQY True PC9_epitope_Rep1 1172.57537652656 1172.57426993586 85.117 2 0.14130332492231723 0.0007045974986788797 0.003694515484264918 ['ENSG00000059378|ENST00000263549|PARP12'] 77379 9216 NSEPETLEY True H1975_Epitope_Rep1 1080.46113461996 1080.4600299358601 40.358 2 0.1413008051302646 0.0007045974986788797 0.003694729773554459 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 75685 22612 NLIDLDDLYV True PC9_epitope_Rep4 1191.6023195503901 1191.6012299358601 95.208 2 0.14130012090756716 0.0007045974986788797 0.0036947879636568654 ['ENSG00000125676|ENST00000245838|THOC2'] 89233 18908 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48561496793 77.515 1 0.1412988365290697 0.0007045974986788797 0.0036948971967995918 ['ENSG00000167658|ENST00000309311|EEF2'] 87366 20624 QPSSLLPLA True PC9_epitope_Rep3 924.5280324113199 924.52748496793 84.6 1 0.14129354965379504 0.0007045974986788797 0.0036953468658943163 ['ENSG00000117984|ENST00000236671|CTSD'] 101349 22170 SLITGQDLLSV True PC9_epitope_Rep1 1144.63395403184 1144.6328499358601 90.094 2 0.1412930666407741 0.0007045974986788797 0.00369538795071666 ['ENSG00000100625|ENST00000216513|SIX4'] 14970 12161 DYFEQYGK True PC9_epitope_Rep4 1048.4501760134401 1048.44906993586 54.594 2 0.141284772618346 0.0007045974986788797 0.003696093506386995 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 105158 11494 SRFPQGAQL True PC9_epitope_Rep1 1002.5246783663797 1002.52358993586 49.091 2 0.14127875601631454 0.0007045974986788797 0.003696605410124831 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 138559 13222 YIDAQFEAY True H1975_Epitope_Rep3 1118.49204082542 1118.49147496793 56.114 1 0.14127633835521491 0.0007045974986788797 0.003696811129048465 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10'] 54849 17195 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 72.915 2 0.14127080996561575 0.0007045974986788797 0.0036972815827048494 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 21133 5450 ERAPGETAL True PC9_epitope_Rep4 942.4770594676199 942.47596993586 27.703 2 0.14126802121037838 0.0007045974986788797 0.0036975189220999284 ['ENSG00000092148|ENST00000399332|HECTD1'] 45865 12311 ISDRLIGIY True H1975_Epitope_Rep2 1048.59169529704 1048.5905899358602 52.438 2 0.14126090518212725 0.0007045974986788797 0.0036981246062248356 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 28483 11660 FSDVDSPYY True H1975_Epitope_Rep3 1091.44475627983 1091.44364993586 49.985 2 0.14125964294956023 0.0007045974986788797 0.0036982320520229477 ['ENSG00000170779|ENST00000336219|CDCA4'] 104696 21634 SQVAVAGLLTV True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 88.041 2 0.14125381890017588 0.0007045974986788797 0.0036987278562535006 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 61925 16155 LLDFSYEQY True H1975_Epitope_Rep2 1176.5339056373998 1176.53280993586 67.351 2 0.1412488518403042 0.0007045974986788797 0.003699150756619965 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 66972 13713 LSPEELLLR True H1975_Epitope_Rep3 1068.6179100448799 1068.6168099358601 58.043 2 0.14124819260136887 0.0007045974986788797 0.0036992068884760423 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion', 'ENSG00000120756|ENST00000457734|PLS1'] 32959 10157 GIDSSSPEV True PC9_epitope_Rep1 889.4028914678499 889.40234496793 43.945 1 0.14124244179809106 0.0007045974986788797 0.0036996965847928324 ['ENSG00000169564|ENST00000303577|PCBP1'] 7221 10922 ARDDTHYLL True PC9_epitope_Rep1 1102.54072235334 1102.5396299358601 46.897 2 0.14123720842009205 0.0007045974986788797 0.003700142276829097 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 124760 18236 VHDEGVWAL True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 74.936 2 0.1412371917939513 0.0007045974986788797 0.003700143692851886 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 23915 14110 EYLDDRNTF True PC9_epitope_Rep5 1171.51456717515 1171.51346993586 59.284 2 0.14123399773210468 0.0007045974986788797 0.003700415736147025 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.H214R|1|0.61|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant'] 108251 16509 SYIEHIFEI True NCI_RA007_Epitope_Rep2 1149.57062549929 1149.57007496793 68.945 1 0.1412332088744169 0.0007045974986788797 0.003700482927457144 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 21764 10969 ERTSFNYAM True PC9_epitope_Rep6 1117.4862442523297 1117.4851499358601 53.079 2 0.1412320415069053 0.0007045974986788797 0.003700582360732533 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 98114 8788 SESFVSPEA True H1975_Epitope_Rep2 951.41854153199 951.4179949679301 38.767 1 0.14123082175074805 0.0007045974986788797 0.003700686259164672 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 128217 13781 VPNKFLVTA True PC9_epitope_Rep3 987.5753169569099 987.57420993586 58.088 2 0.14122637513302333 0.0007045974986788797 0.0037010650451091724 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 54084 18552 KVLDILQHI True PC9_epitope_Rep4 1077.65462990677 1077.6535299358602 79.435 2 0.14122164444486884 0.0007045974986788797 0.0037014680718555084 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 142862 22146 YYTEFPTVL True PC9_epitope_Rep1 1131.54882742555 1131.5477299358602 90.0 2 0.14122038397194286 0.0007045974986788797 0.0037015754640618292 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 47156 15603 ITVTSEVPFSK True PC9_epitope_Rep1 1206.6496040959798 1206.6485099358601 64.837 2 0.1412147088351783 0.0007045974986788797 0.0037020590235971674 ['ENSG00000116251|ENST00000234875|RPL22'] 69584 16545 LVDLAPLGY True H1975_Epitope_Rep2 959.5327834385898 959.53168993586 68.865 2 0.14121404468485518 0.0007045974986788797 0.0037021156177323793 ['nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 40843 8452 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48777496793 37.494 1 0.14121157289132752 0.0007045974986788797 0.0037023262538172065 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 2527 4360 AEQPSQPSSTP True H1975_Epitope_Rep2 1127.5094817947102 1127.5083899358601 21.885 2 0.14120940492110887 0.0007045974986788797 0.0037025110091113223 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 104413 16803 SQLEDAIRL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 72.603 2 0.14120723042981811 0.0007045974986788797 0.003702696329317885 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 93009 10894 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68025490379 46.892 3 0.14120715646562648 0.0007045974986788797 0.0037027026330502 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 75401 6342 NIVEAAAVR True NCI_RA007_Epitope_Rep5 941.5294293936498 941.52832993586 31.069 2 0.14120421317955184 0.0007045974986788797 0.0037029534885794 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF', 'ENST00000475510.1_1_3:124452395-124452491:-|nuORF'] 133549 18402 VWSDVTPLTF True NCI_RA007_Epitope_Rep5 1163.58627556343 1163.5851699358602 77.593 2 0.1411990956903548 0.0007045974986788797 0.0037033896910184166 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 115664 14535 TRYIAPTVL True PC9_epitope_Rep2 1032.5967806774797 1032.59568993586 61.18 2 0.14119699475287967 0.0007045974986788797 0.0037035687846158453 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 74996 6969 NHQGTYVL True PC9_epitope_Rep6 930.4559301002199 930.45482993586 35.764 2 0.14119483326285845 0.0007045974986788797 0.003703753048954848 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 132186 11067 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 49.203 2 0.1411942308399049 0.0007045974986788797 0.0037038044063831743 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 87760 9065 QRDEKVLEL True PC9_epitope_Rep2 1128.6138872935999 1128.61225490379 40.214 3 0.1411907524642677 0.0007045974986788797 0.003704100956749213 ['ENSG00000135968|ENST00000309863|GCC2'] 66382 12244 LSGHLETVILG True NCI_RA007_Epitope_Rep1 1137.63937376545 1137.63826993586 51.595 2 0.14118301455442755 0.0007045974986788797 0.0037047607399319214 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 138978 5193 YKPLDLRPK True NCI_RA007_Epitope_Rep5 1128.6655289436399 1128.6638849037902 26.67 3 0.1411817809657668 0.0007045974986788797 0.0037048659342809637 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000373570.8_1_9:127620199-127620799:-|nuORF'] 137168 9345 YAYDGKDYL True NCI_RA007_Epitope_Rep3 1106.4920408254197 1106.49147496793 43.852 1 0.14118171494067308 0.0007045974986788797 0.0037048715646584057 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 13988 12585 DRDPTAYAL True PC9_epitope_Rep2 1020.4876241513199 1020.48652993586 53.716 2 0.14117652197547487 0.0007045974986788797 0.00370531442823272 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 77016 9175 NRIANPDQL True PC9_epitope_Rep5 1039.5410567065098 1039.53994993586 40.238 2 0.14117533967450388 0.0007045974986788797 0.0037054152639037475 ['ENSG00000117528|ENST00000370214|ABCD3', 'nc|ENSG00000117528|P28288-3|ABCD3', 'nc|ENSG00000117528|P28288-2|ABCD3'] 114722 15806 TQILSVPKV True PC9_epitope_Rep2 983.6015317047498 983.60042993586 66.058 2 0.14116429185403254 0.0007045974986788797 0.0037063576380702685 ['nc|ENSG00000120802|P42166|TMPO'] 39269 20219 HILDFSPSL True PC9_epitope_Rep2 1027.5338460677501 1027.53274993586 83.19 2 0.14116295744215773 0.0007045974986788797 0.0037064714788943368 ['ENSG00000124702|ENST00000326974|KLHDC3'] 111891 15291 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 63.638 2 0.14115916734833642 0.0007045974986788797 0.0037067948368065752 ['ENSG00000213719|ENST00000375784|CLIC1'] 9551 6435 AWAPKPYHKF True NCI_RA007_Epitope_Rep4 1243.6502132326698 1243.64857490379 31.353 3 0.1411588963506909 0.0007045974986788797 0.003706817958475416 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 127303 12669 VMDSKIVQV True PC9_epitope_Rep5 1017.5528672601698 1017.55176993586 53.735 2 0.14115523909633262 0.0007045974986788797 0.0037071300114270263 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 89406 14522 QYAPSTAQF True PC9_epitope_Rep5 1011.4661604307499 1011.46506993586 60.857 2 0.14115016132885952 0.0007045974986788797 0.0037075633119677508 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 132375 16914 VVAEELENV True PC9_epitope_Rep3 1000.50769088956 1000.50658993586 70.216 2 0.14114903839987916 0.0007045974986788797 0.0037076591415166485 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.I97V|1|0.22|ENSG00000167196|chr15:75913212-75913212|A/G|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 133405 18352 VVVPTLDTV True PC9_epitope_Rep6 941.5433481222899 941.54224993586 83.233 2 0.14114828404597457 0.0007045974986788797 0.0037077235186450106 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 138447 17903 YHLDSSGSYVF True PC9_epitope_Rep2 1273.5615173675699 1273.5604299358602 74.167 2 0.141148206754077 0.0007045974986788797 0.003707730114856167 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 124994 14856 VHYGEVVQL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 62.408 2 0.14114534012554913 0.0007045974986788797 0.003707974765627293 ['ENSG00000127080|ENST00000287996|IPPK'] 66118 11313 LSELEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.5382899358601 48.562 2 0.14114184257330803 0.0007045974986788797 0.003708273283901876 ['ENSG00000145623|ENST00000274276|OSMR'] 45681 17583 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6744449037901 72.822 3 0.14114046512037492 0.0007045974986788797 0.003708390856913373 ['ENSG00000136628|ENST00000366923|EPRS1'] 64234 15585 LPGVDALSNI True H1975_Epitope_Rep3 997.5444107514501 997.5438649679301 65.364 1 0.14113972250955384 0.0007045974986788797 0.003708454244271994 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 44021 19879 IIIDSVPEV True PC9_epitope_Rep4 983.55391280599 983.55280993586 84.597 2 0.141139474308819 0.0007045974986788797 0.0037084754302908795 ['nc|ENSG00000174306|Q9H4I2-2|ZHX3', 'ENSG00000174306|ENST00000683867|ZHX3'] 28519 12983 FSEEHYIFY True H1975_Epitope_Rep3 1233.5342399905699 1233.5331499358601 55.173 2 0.14113944528226632 0.0007045974986788797 0.003708477907958968 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'nc|ENSG00000145715|P20936-2|RASA1', 'nc|ENSG00000145715|P20936-4|RASA1'] 115833 9346 TSDTLNNVGY True H1975_Epitope_Rep2 1082.48801807414 1082.4869299358602 40.91 2 0.1411379446851733 0.0007045974986788797 0.00370860599917485 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 85794 4957 QHDPSAVAV True PC9_epitope_Rep4 922.4508447197799 922.44974993586 25.669 2 0.14113522473221032 0.0007045974986788797 0.003708838185992381 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 107104 9206 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 45.55 2 0.14111089723688042 0.0007045974986788797 0.0037109155261649037 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 85173 5485 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47687496793 26.151 1 0.14110978576148586 0.0007045974986788797 0.003711010463305624 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 105117 11886 SREPSQVIF True PC9_epitope_Rep4 1061.5505587610498 1061.54946993586 53.495 2 0.14110603829985913 0.0007045974986788797 0.0037113305720741447 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 99339 10704 SHSSLVSSI True PC9_epitope_Rep1 915.46616043075 915.46506993586 46.062 2 0.1411057228798723 0.0007045974986788797 0.0037113575165488477 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 347 20138 AAIPIQINV True PC9_epitope_Rep4 937.55966689277 937.55856993586 85.596 2 0.1411031669109534 0.0007045974986788797 0.003711575865098354 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 106224 15901 STEFNPLIY True H1975_Epitope_Rep2 1082.5284263341398 1082.5278749679298 66.364 1 0.14108492509127313 0.0007045974986788797 0.003713134577457444 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 77589 17358 NTDSLDWALY True H1975_Epitope_Rep1 1196.5349682665599 1196.53437496793 72.233 1 0.1410838030420511 0.0007045974986788797 0.00371323047460601 ['ENSG00000108561|ENST00000225698|C1QBP'] 104992 16165 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.59957490379 67.32 3 0.14108134725598948 0.0007045974986788797 0.003713440369583579 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 134072 6849 VYKPAQNSW True NCI_RA007_Epitope_Rep5 1091.5399940773498 1091.5388899358602 33.029 2 0.14107872092513876 0.0007045974986788797 0.0037136648539694305 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 101804 14325 SLPEELNRV True PC9_epitope_Rep3 1055.56112344475 1055.56002993586 60.187 2 0.14107069105754094 0.0007045974986788797 0.0037143512865683973 ['ENSG00000137815|ENST00000389629|RTF1'] 45301 19743 IPYHIVNIV True PC9_epitope_Rep1 1066.6175161220601 1066.61640993586 80.768 2 0.14106858194305905 0.0007045974986788797 0.0037145316049152512 ['ENSG00000031698|ENST00000234677|SARS1'] 104927 10549 SRDDTTLNAL True PC9_epitope_Rep2 1104.54111627616 1104.54000993586 45.896 2 0.14106762153665578 0.0007045974986788797 0.0037146137175566407 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 91951 5621 RKNQGDFSL True NCI_RA007_Epitope_Rep4 1063.5410567065098 1063.53994993586 28.222 2 0.14105947345030087 0.0007045974986788797 0.0037153104334863647 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF', 'ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 29439 22418 FVEETVYLL True PC9_epitope_Rep1 1111.58012755383 1111.57902993586 91.05 2 0.14105382025493907 0.0007045974986788797 0.0037157938956693193 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 96976 12061 SAYEFYHAL True NCI_RA007_Epitope_Rep5 1099.49746055903 1099.49636993586 53.05 2 0.14105331927837167 0.0007045974986788797 0.0037158367422753763 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 7895 6681 ATAIGMPVEK True NCI_RA007_Epitope_Rep3 1015.5372171960299 1015.5361099358599 33.362 2 0.14105322076758234 0.0007045974986788797 0.0037158451675833233 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 29668 19975 FVLDKVPFL True PC9_epitope_Rep6 1076.6270181766 1076.62592993586 89.498 2 0.1410513905647797 0.0007045974986788797 0.003716001702331628 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 35028 19704 GQVEDVVGNL True PC9_epitope_Rep1 1028.5138388991597 1028.51274993586 80.618 2 0.14104884849928437 0.0007045974986788797 0.003716219132572716 ['ENSG00000196878|ENST00000356082|LAMB3'] 31659 8874 GEFRQGLISA True NCI_RA007_Epitope_Rep5 1076.56145779792 1076.56036993586 40.798 2 0.14104805957019614 0.0007045974986788797 0.0037162866145327776 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 121958 22525 VFTEVANLF True PC9_epitope_Rep3 1038.53859709502 1038.53750993586 91.918 2 0.14103639826221112 0.0007045974986788797 0.0037172842196948634 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 28458 14128 FSDLYNEVY True H1975_Epitope_Rep2 1148.50260550912 1148.50207496793 59.498 1 0.1410290454049954 0.0007045974986788797 0.003717913380681169 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 77005 10562 NRHEGVFKF True PC9_epitope_Rep1 1132.5777765684 1132.57612490379 45.518 3 0.14102800270595517 0.0007045974986788797 0.00371800260972352 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 47204 4558 IVAGTLTNK True NCI_RA007_Epitope_Rep5 915.53893144819 915.53782993586 24.191 2 0.1410237336520123 0.0007045974986788797 0.003718367956453581 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 133831 19994 VYGFLRNGF True PC9_epitope_Rep3 1071.5501648382299 1071.5490699358602 82.152 2 0.14102275661786579 0.0007045974986788797 0.0037184515762917303 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 60884 13439 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 56.553 2 0.14102029223611462 0.0007045974986788797 0.003718662499621821 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 94889 6865 RTDPVVADY True H1975_Epitope_Rep2 1034.50327421546 1034.5021699358601 31.325 2 0.1410162674725891 0.0007045974986788797 0.003719006999571231 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 4080 20386 AHMDIFQNL True PC9_epitope_Rep1 1087.5120650773501 1087.5109699358602 83.238 2 0.14101451453023328 0.0007045974986788797 0.0037191570527021125 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1'] 142295 13743 YYDKHFTEF True PC9_epitope_Rep1 1248.54513902744 1248.5440499358601 57.707 2 0.1410132998283704 0.0007045974986788797 0.0037192610355795065 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 19432 9690 ELNEFLTR True H1975_Epitope_Rep1 1020.52400966004 1020.52290993586 42.197 2 0.1410106995895551 0.0007045974986788797 0.003719483635126525 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 140365 11754 YRDPYTEQTI True PC9_epitope_Rep4 1284.59863115228 1284.5975299358602 52.973 2 0.1410060172348859 0.0007045974986788797 0.0037198845124004967 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 39102 10961 HHVLQNDVL True PC9_epitope_Rep1 1073.56179215109 1073.5606899358602 47.049 2 0.14099111685641513 0.0007045974986788797 0.0037211604853786204 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 141829 6608 YVDEEGNLVK True H1975_Epitope_Rep3 1164.5662683948397 1164.56516993586 30.37 2 0.1409729560989612 0.0007045974986788797 0.0037227162431383645 ['ENST00000474787.1_1_9:139974466-139974655:+|nuORF', 'nc|ENSG00000197355|Q3KQV9-2|UAP1L1', 'ENSG00000197355|ENST00000409858|UAP1L1'] 26321 19517 FHNELLTQL True PC9_epitope_Rep5 1113.5818588893299 1113.5812749679299 80.125 1 0.1409710992912542 0.0007045974986788797 0.0037228753445904933 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 93482 7466 RQINVGNAL True NCI_RA007_Epitope_Rep4 983.5512274673898 983.55012993586 35.363 2 0.14096139027345345 0.0007045974986788797 0.003723707376201831 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 76600 20104 NQMDGFDTL True PC9_epitope_Rep5 1039.4280606698699 1039.4269699358601 82.378 2 0.1409578877613656 0.0007045974986788797 0.0037240075754786353 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 1492 5229 AEELGNNVKP True H1975_Epitope_Rep3 1069.54038800017 1069.53928993586 25.198 2 0.14095579332173522 0.0007045974986788797 0.003724187100745713 ['nc|ENSG00000131373|Q9UJ83-3|HACL1', 'nc|ENSG00000131373|Q9UJ83-4|HACL1', 'nc|ENSG00000131373|Q9UJ83-2|HACL1', 'ENSG00000131373|ENST00000321169|HACL1'] 117051 23335 TVIDQIPFL True PC9_epitope_Rep5 1044.58554728744 1044.5844499358602 94.739 2 0.14095311790747367 0.0007045974986788797 0.0037244164368386767 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 114231 6146 TPMGPGRTV True PC9_epitope_Rep5 914.46438660894 914.46328993586 28.624 2 0.1409448630922919 0.0007045974986788797 0.00372512412656543 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 95558 20143 RWSPVRPLVF True PC9_epitope_Rep1 1255.71896149883 1255.7173049037901 82.309 3 0.1409439071659032 0.0007045974986788797 0.0037252060872600802 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 107429 13737 SVLQQNPSL True PC9_epitope_Rep4 984.52400966004 984.52290993586 60.737 2 0.14094274330274997 0.0007045974986788797 0.003725305878772227 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 34992 19734 GQTEVFQAL True PC9_epitope_Rep5 991.4974605590297 991.49636993586 80.953 2 0.14093784909196755 0.0007045974986788797 0.0037257255453416118 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'THOC6|p.L11V|1|0.09|ENSG00000131652|chr16:3024357-3024357|C/G|missense_variant', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 94708 6041 RSDPGGGGLAY True H1975_Epitope_Rep3 1048.49377216092 1048.49266993586 28.251 2 0.14093617690383897 0.0007045974986788797 0.0037258689421153742 ['ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 134435 17432 VYPNSFFRY True PC9_epitope_Rep6 1191.5712942056298 1191.57018993586 79.666 2 0.1409304925694506 0.0007045974986788797 0.0037263564372857065 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 77677 15429 NTIDRLIQA True PC9_epitope_Rep5 1042.57710786206 1042.5760099358602 64.357 2 0.1409301564921676 0.0007045974986788797 0.003726385261646845 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 96207 10056 RYPTSIASL True NCI_RA007_Epitope_Rep5 1006.5447451046199 1006.54364993586 45.319 2 0.14092598430602374 0.0007045974986788797 0.003726743116202012 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 111031 13002 THDEAINVL True PC9_epitope_Rep5 1010.5032742154599 1010.50216993586 55.02 2 0.14092419874095188 0.0007045974986788797 0.0037268962771614443 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 41422 9138 HYGQSGISM True PC9_epitope_Rep5 978.4229157197799 978.42180993586 40.095 2 0.14092054203646268 0.0007045974986788797 0.0037272099588953264 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 120112 4845 VEAAAELSAK True H1975_Epitope_Rep3 987.5236753068699 987.52256993586 23.762 2 0.14091738261959041 0.0007045974986788797 0.0037274810030679226 ['ENSG00000159335|ENST00000309083|PTMS'] 108263 21549 SYIEHIFEI True PC9_epitope_Rep1 1149.57062549929 1149.57007496793 87.71 1 0.1409130041197503 0.0007045974986788797 0.003727856663827909 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 141312 12599 YTDSSSILNY True H1975_Epitope_Rep1 1161.51898384925 1161.51847496793 53.512 1 0.1409115574979434 0.0007045974986788797 0.0037279807874291753 ['ENSG00000111647|ENST00000279907|BLTP3B'] 48211 17890 IYPVDLGDKF True PC9_epitope_Rep6 1165.6019256275697 1165.60082993586 81.439 2 0.14091143326906633 0.0007045974986788797 0.003727991446754167 ['nc|ENSG00000163882|P52434-3|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H', 'nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H'] 118950 11914 VADTVARVL True PC9_epitope_Rep2 942.5498304850598 942.54872993586 51.152 2 0.1409113014653211 0.0007045974986788797 0.003728002756065604 ['ENSG00000145632|ENST00000274289|PLK2'] 137150 22705 YAVELFEGL True PC9_epitope_Rep2 1039.5226126777097 1039.5215099358602 92.829 2 0.14090988561742968 0.0007045974986788797 0.003728124243869173 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 104315 23076 SQIPFPLSL True PC9_epitope_Rep1 1000.5593325396 1000.55877496793 93.563 1 0.1409015960102903 0.0007045974986788797 0.0037288356180939035 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 78242 19759 NYGQYFTLW True NCI_RA007_Epitope_Rep5 1190.53965972418 1190.53856993586 82.914 2 0.14089134270861642 0.0007045974986788797 0.0037297156933240984 ['ENSG00000109929|ENST00000264027|SC5D'] 21477 18873 ERLGQFMTL True PC9_epitope_Rep4 1093.55901526977 1093.5579099358602 80.681 2 0.1408761500549076 0.0007045974986788797 0.0037310201083533587 ['ENSG00000113739|ENST00000265087|STC2'] 54739 11362 KYMEDYHQF True PC9_epitope_Rep1 1259.52810906431 1259.5264649037902 48.584 3 0.1408748318900161 0.0007045974986788797 0.0037311333050382505 ['ENSG00000118898|ENST00000345988|PPL'] 8507 7224 ATSPALFNR True NCI_RA007_Epitope_Rep5 975.51377932951 975.51268993586 34.465 2 0.14087406155862017 0.0007045974986788797 0.0037311994583994587 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 88381 19096 QSLEYLEQV True PC9_epitope_Rep4 1107.54480467427 1107.54370993586 81.544 2 0.14086719014657384 0.0007045974986788797 0.003731789602643392 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 48858 8156 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54806993586 36.322 2 0.1408569206034269 0.0007045974986788797 0.0037326717644368813 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 70843 16044 LYDIILKNF True NCI_RA007_Epitope_Rep5 1137.64339651673 1137.6422899358602 68.443 2 0.14085575148859658 0.0007045974986788797 0.003732772205423377 ['ENSG00000092010|ENST00000206451|PSME1'] 56717 17172 LDLDSIIAEVK True H1975_Epitope_Rep1 1214.67581884382 1214.6747299358601 71.502 2 0.14084765068727223 0.0007045974986788797 0.0037334682350329976 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 54700 21807 KYLVIGDLLF True PC9_epitope_Rep4 1179.69034670915 1179.68924993586 92.077 2 0.14084350978610827 0.0007045974986788797 0.0037338240754360833 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 11017 9768 DAQSAPLRV True PC9_epitope_Rep1 955.50869394907 955.50758993586 42.433 2 0.14083921291661772 0.0007045974986788797 0.0037341933542274224 ['CON__P02754'] 7267 13729 ARDFTVSAL True PC9_epitope_Rep4 978.5134449763399 978.51234993586 60.706 2 0.1408383770135085 0.0007045974986788797 0.0037342651970814 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 47940 13786 IYIKQIKTF True PC9_epitope_Rep5 1152.6906810623198 1152.68958993586 58.047 2 0.14083049402681033 0.0007045974986788797 0.00373494277872626 ['ENSG00000103479|ENST00000262133|RBL2'] 25527 8968 FEIEPDKEC True H1975_Epitope_Rep2 1108.47467650912 1108.47356993586 39.449 2 0.1408263647768656 0.0007045974986788797 0.0037352977568025293 ['ENSG00000100941|ENST00000216832|PNN'] 134472 20695 VYPQYVIEY True PC9_epitope_Rep3 1172.57537652656 1172.57426993586 84.877 2 0.14082492034808822 0.0007045974986788797 0.0037354219375042904 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 40759 18729 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.55843490379 77.264 3 0.14082441856214478 0.0007045974986788797 0.003735465078097464 ['ENSG00000169813|ENST00000682386|HNRNPF'] 77483 15653 NTATIFHEL True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 68.136 2 0.14082199723612265 0.0007045974986788797 0.0037356732563576037 ['ENSG00000183735|ENST00000331710|TBK1'] 125278 16092 VILPTVHEV True PC9_epitope_Rep1 1005.5858816406101 1005.58478993586 66.714 2 0.14082166729649917 0.0007045974986788797 0.003735701624455181 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 40645 9672 HRNGGLITL True PC9_epitope_Rep2 979.55631284783 979.55520993586 42.541 2 0.1408144697034009 0.0007045974986788797 0.003736320524234876 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 3974 14076 AHDTTLVAL True PC9_epitope_Rep3 939.50254593947 939.50144993586 59.231 2 0.14081364942935806 0.0007045974986788797 0.0037363910636304147 ['ENSG00000134575|ENST00000672073|ACP2'] 37887 18699 GYSEHFVEF True PC9_epitope_Rep1 1113.47672511445 1113.47562993586 76.715 2 0.14081361458917752 0.0007045974986788797 0.003736394059737965 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 84169 22685 PYISNIYLI True PC9_epitope_Rep1 1094.60119735158 1094.60010993586 92.062 2 0.1408033812311282 0.0007045974986788797 0.0037372741881711307 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 33971 11839 GLSQSALPYR True PC9_epitope_Rep3 1090.5771078620598 1090.5760099358602 50.558 2 0.14080043493580163 0.0007045974986788797 0.003737527624846194 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 12131 12755 DIDIRPGLY True H1975_Epitope_Rep2 1060.5553097883198 1060.5542099358602 54.165 2 0.1408000218709432 0.0007045974986788797 0.003737563157535586 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B', 'ENST00000484312.1_1_3:179298984-179304429:+|nuORF'] 130135 8455 VSDSGISTDY True H1975_Epitope_Rep2 1042.44548455582 1042.44497496793 37.475 1 0.14079852110984464 0.0007045974986788797 0.003737692258913441 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 38488 7083 HEQLRAVIV True H1975_Epitope_Rep3 1063.61382772395 1063.6127299358602 32.212 2 0.14079848249090957 0.0007045974986788797 0.0037376955811246203 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 45560 6667 IQRTPKIQVYS True NCI_RA007_Epitope_Rep4 1331.75613485319 1331.7544949037901 32.266 3 0.14079701503441086 0.0007045974986788797 0.003737821821895969 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 90367 8619 REGPYSISV True H1975_Epitope_Rep2 1006.5083595959 1006.50726993586 38.109 2 0.14079375163169625 0.0007045974986788797 0.003738102577552616 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 129291 18108 VQVPVPVTV True PC9_epitope_Rep6 936.5644179200399 936.56332993586 82.289 2 0.14078361176033988 0.0007045974986788797 0.0037389750600081107 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 139934 20699 YQAPDIDVQL True PC9_epitope_Rep2 1160.57135377528 1160.5702499358601 85.055 2 0.14077853702984172 0.0007045974986788797 0.003739411789606679 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 95897 17287 RYLDLFTSF True NCI_RA007_Epitope_Rep4 1160.5866099165999 1160.58550993586 74.853 2 0.1407708210533503 0.0007045974986788797 0.0037400759208556017 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 116923 17005 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep1 1178.5641606002998 1178.56306993586 70.232 2 0.14076684703133874 0.0007045974986788797 0.0037404180193865875 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 77785 20028 NTTDIFQTV True PC9_epitope_Rep2 1037.50293986229 1037.5023749679299 82.441 1 0.14076124448312635 0.0007045974986788797 0.0037409003601803076 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 8003 17216 ATDIQVLALTY True H1975_Epitope_Rep2 1206.6496040959798 1206.6485099358601 71.512 2 0.14075944913825808 0.0007045974986788797 0.003741054940047776 ['ENSG00000141101|ENST00000268802|NOB1', 'ENST00000502915.1_1_4:139481866-139482694:+|nuORF'] 65947 12686 LSDTEVLEY True H1975_Epitope_Rep2 1067.50227115595 1067.5016749679298 53.898 1 0.14075766377084598 0.0007045974986788797 0.003741208667132391 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 121705 17712 VFLENVIR True PC9_epitope_Rep2 988.5705659296399 988.56946993586 73.411 2 0.14075673297914834 0.0007045974986788797 0.0037412888144047 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 107675 9458 SVQVPEFTPK True NCI_RA007_Epitope_Rep4 1130.5971746003 1130.5960699358602 43.238 2 0.14074933086389838 0.0007045974986788797 0.0037419262456919785 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 8469 7047 ATQQILDEAER True H1975_Epitope_Rep1 1272.6309939097198 1272.62988993586 32.14 2 0.14074773386566977 0.0007045974986788797 0.0037420637849115883 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2'] 90544 8519 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64402993586 39.452 2 0.14073920979584983 0.0007045974986788797 0.0037427979931740534 ['ENSG00000127540|ENST00000591899|UQCR11'] 32240 6166 GEYLGQKVA True NCI_RA007_Epitope_Rep4 963.5025459394698 963.50144993586 30.328 2 0.14073120310004322 0.0007045974986788797 0.003743487768258676 ['nc|ENSG00000007264|P42679-3|MATK', 'ENSG00000007264|ENST00000310132|MATK', 'nc|ENSG00000007264|P42679-2|MATK'] 134159 13760 VYLPGSRQTL True PC9_epitope_Rep5 1132.62405805448 1132.62296993586 57.95 2 0.14072470151418964 0.0007045974986788797 0.003744047971167622 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 110212 9572 TEQPPSPLP True H1975_Epitope_Rep1 964.48656152216 964.48601496793 41.742 1 0.1407241095565492 0.0007045974986788797 0.003744098980757754 ['ENSG00000075568|ENST00000186436|TMEM131'] 65284 17672 LQWNGKEFTA True PC9_epitope_Rep1 1192.58767254576 1192.58656993586 72.769 2 0.1407226416257525 0.0007045974986788797 0.003744225476815669 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 1036 6426 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.4179949679301 29.637 1 0.1407174197416026 0.0007045974986788797 0.003744675496787321 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 12740 9274 DLEGLSQR True PC9_epitope_Rep1 916.46140940348 916.46030993586 40.525 2 0.14071568773343812 0.0007045974986788797 0.003744824772428074 ['ENSG00000100345|ENST00000216181|MYH9'] 32007 4382 GEQGARIQSV True H1975_Epitope_Rep2 1043.53597132607 1043.5348699358601 21.967 2 0.14071475478868337 0.0007045974986788797 0.00374490518207224 ['ENSG00000196878|ENST00000356082|LAMB3'] 115560 7364 TRSPVKVTL True PC9_epitope_Rep2 999.60767971435 999.60658993586 33.706 2 0.14070390855334564 0.0007045974986788797 0.003745840134682698 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 65406 16092 LREPLPATL True PC9_epitope_Rep3 1008.59678067748 1008.59568993586 67.047 2 0.14070221542045896 0.0007045974986788797 0.0037459861047293317 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 110328 5071 TETLVTREA True H1975_Epitope_Rep2 1018.5294889633 1018.52838993586 24.588 2 0.14069530596256521 0.0007045974986788797 0.003746581848210016 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 17213 4597 EGVKFDESEK True NCI_RA007_Epitope_Rep2 1166.54553295026 1166.54389490379 22.507 3 0.1406921762023697 0.0007045974986788797 0.003746851731581056 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 22285 5923 ETDENFHNY True H1975_Epitope_Rep3 1167.44688153815 1167.4457899358601 27.791 2 0.14068844236246084 0.0007045974986788797 0.003747173730758713 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'TBC1D32|p.E577Kfs*8|1|0.07|ENSG00000146350|chr6:121279125-121279125|C/-|frameshift_variant', 'nc|ENSG00000146350|Q96NH3-5|TBC1D32'] 111502 18094 THYDHVLIEL True PC9_epitope_Rep5 1238.6295373577398 1238.62789490379 74.61 3 0.14068761028695984 0.0007045974986788797 0.0037472454910885437 ['ENSG00000076003|ENST00000264156|MCM6'] 71217 20970 LYPEGLAQL True PC9_epitope_Rep3 1002.5385970950199 1002.53807496793 85.941 1 0.14068605913917778 0.0007045974986788797 0.0037473792696972384 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 126847 15488 VLQALEGLK True PC9_epitope_Rep3 969.5858816406098 969.58478993586 64.726 2 0.14068434332176896 0.0007045974986788797 0.0037475272557392562 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 21343 19298 ERFNVPVSL True PC9_epitope_Rep1 1059.5712942056298 1059.57077496793 79.034 1 0.14068328841145666 0.0007045974986788797 0.0037476182426564005 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 74485 10438 NFEDVAFDEK True H1975_Epitope_Rep1 1212.5298828861198 1212.52878993586 45.105 2 0.14067591640330732 0.0007045974986788797 0.003748254145798213 ['ENSG00000185624|ENST00000331483|P4HB'] 75158 6422 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59691490379 31.798 3 0.14067557912488796 0.0007045974986788797 0.003748283241706087 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 28666 10853 FSNPRALYL True H1975_Epitope_Rep1 1079.5763795860698 1079.5752899358602 46.705 2 0.14067265909719817 0.0007045974986788797 0.0037485351523204604 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 130153 10119 VSDTVVEPY True NCI_RA007_Epitope_Rep2 1007.4811417885498 1007.48057496793 43.948 1 0.14067205373937913 0.0007045974986788797 0.003748587378603724 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 108677 12863 SYQKVMALW True NCI_RA007_Epitope_Rep3 1124.5688516774799 1124.56774993586 57.854 2 0.14067118174025284 0.0007045974986788797 0.0037486626102097133 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 99110 16357 SHIFEVQAL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 75.295 2 0.14066882139012069 0.0007045974986788797 0.003748866256605545 ['ENSG00000124201|ENST00000396105|ZNFX1'] 59009 6572 LEVLSGER True NCI_RA007_Epitope_Rep2 901.4868958753299 901.48578993586 30.176 2 0.14065754404736833 0.0007045974986788797 0.0037498393950858586 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 111330 5231 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 24.97 2 0.14065504496790995 0.0007045974986788797 0.0037500550782188953 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 113744 7940 TMDNPTTTQY True H1975_Epitope_Rep3 1170.48630382198 1170.48577496793 35.51 1 0.1406537840705346 0.0007045974986788797 0.003750163904675261 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 109619 4821 TEAGAGAVAAA True H1975_Epitope_Rep2 887.4348603024698 887.43431496793 23.635 1 0.14065160526248655 0.0007045974986788797 0.0037503519622190634 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 2413 9963 AEQFKLIQA True H1975_Epitope_Rep1 1046.5760452329 1046.57547496793 43.26 1 0.1406469240293765 0.0007045974986788797 0.003750756040999014 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 760 10288 AAVPRAAFL True H1975_Epitope_Rep2 914.5337864980999 914.53268993586 44.579 2 0.14062241025102765 0.0007045974986788797 0.003752872747669286 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 109789 6060 TEEAAVAIKA True H1975_Epitope_Rep3 1001.5393253710098 1001.53822993586 28.32 2 0.14061678847924372 0.0007045974986788797 0.0037533583412420034 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 90717 13508 REQQLISAVFP True H1975_Epitope_Rep3 1286.6982856238997 1286.69718993586 57.235 2 0.14061000228616316 0.0007045974986788797 0.0037539445973798877 ['ENST00000577961.5_1_18:756649-756733:-|nuORF', 'ENST00000418510.1_1_22:26043331-26044389:+|nuORF'] 8856 19017 AVFDKTLAEL True PC9_epitope_Rep4 1105.60192562757 1105.60082993586 81.239 2 0.14060672270111518 0.0007045974986788797 0.0037542279517768355 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 31905 12263 GELVGGLDIVK True NCI_RA007_Epitope_Rep1 1098.62847472858 1098.62736993586 51.67 2 0.1406064303025802 0.0007045974986788797 0.0037542532158835393 ['ENSG00000108010|ENST00000331244|GLRX3', 'ENST00000405027.1_1_6:3978829-3979330:+|nuORF'] 6654 18200 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 75.016 2 0.14060556357249104 0.0007045974986788797 0.003754328104942085 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 99942 10515 SINPDEAVAY True H1975_Epitope_Rep3 1077.4978544818498 1077.49727496793 45.509 1 0.14060453480023255 0.0007045974986788797 0.0037544169970352348 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 64532 12202 LPRPQGITV True PC9_epitope_Rep4 979.5814649665099 979.58036993586 54.754 2 0.1406041368448432 0.0007045974986788797 0.0037544513833272686 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 31842 8585 GEIVRLTTP True NCI_RA007_Epitope_Rep3 984.56039516876 984.55928993586 40.84 2 0.14060182222226753 0.0007045974986788797 0.0037546513900437307 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000597253.5_1_19:4688763-4694742:-|nuORF'] 76132 11492 NMTSVTNHF True PC9_epitope_Rep5 1049.46002950449 1049.4589299358602 49.2 2 0.14060141652996544 0.0007045974986788797 0.0037546864470349157 ['ENSG00000070950|ENST00000264926|RAD18'] 37525 13205 GVVEVTHDL True PC9_epitope_Rep1 967.4974605590298 967.49636993586 55.656 2 0.14059617108315475 0.0007045974986788797 0.0037551397497881797 ['ENSG00000149257|ENST00000358171|SERPINH1'] 60942 8050 LIDENDNKI True PC9_epitope_Rep4 1072.540053647 1072.53894993586 38.414 2 0.14058212195285796 0.0007045974986788797 0.0037563541194240596 ['ENST00000482091.1_1_10:1089912-1094811:-|nuORF', 'nc|ENSG00000067064|Q13907|IDI1', 'ENSG00000067064|ENST00000381344|IDI1'] 64967 13022 LQFDKAINA True PC9_epitope_Rep2 1018.5447451046199 1018.54364993586 55.37 2 0.14058041855021464 0.0007045974986788797 0.0037565013834992395 ['ENSG00000140307|ENST00000396060|GTF2A2'] 32010 7338 GEQKFSSLP True H1975_Epitope_Rep2 991.4974605590298 991.49636993586 33.166 2 0.1405790680751648 0.0007045974986788797 0.0037566181400325808 ['ENSG00000166741|ENST00000299964|NNMT', 'NNMT|p.G217V|1|0.08|ENSG00000166741|chr11:114312332-114312332|G/T|missense_variant'] 118323 14513 TYMGHTGAVW True PC9_epitope_Rep1 1121.4964150132098 1121.4953099358602 60.648 2 0.1405735654574729 0.0007045974986788797 0.0037570939109793484 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 114442 9950 TPVEVPVGGFK True H1975_Epitope_Rep3 1128.6179100448796 1128.6168099358601 43.306 2 0.1405722903783937 0.0007045974986788797 0.0037572041662285198 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 99008 11378 SHDSTSQLYTV True PC9_epitope_Rep1 1236.5622456435601 1236.5611499358602 48.647 2 0.1405716741768246 0.0007045974986788797 0.0037572574499223684 ['ENSG00000143815|ENST00000272163|LBR'] 43843 11885 IHSPVVNEL True PC9_epitope_Rep4 1006.54474510462 1006.54364993586 53.491 2 0.1405620554015017 0.0007045974986788797 0.0037580892941562606 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 87426 16040 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.4631649679301 66.847 1 0.14056041623967136 0.0007045974986788797 0.003758231069214385 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 134867 18778 VYVPHIHVW True PC9_epitope_Rep5 1148.6130994479597 1148.61145490379 77.242 3 0.14055995341181018 0.0007045974986788797 0.0037582711012716648 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF'] 115217 19600 TRDSTFVFM True PC9_epitope_Rep5 1102.5117307241799 1102.5106299358602 80.444 2 0.14055936647496844 0.0007045974986788797 0.003758321868679168 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 95983 10510 RYLEVMRKL True PC9_epitope_Rep4 1206.6906981456598 1206.68905490379 48.149 3 0.1405560434207968 0.0007045974986788797 0.0037586093107988177 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 12708 6060 DLEAHIDSANK True PC9_epitope_Rep2 1211.57823006087 1211.57659490379 28.704 3 0.1405523685051262 0.0007045974986788797 0.0037589272140953166 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 28253 15283 FRLKYENEL True PC9_epitope_Rep1 1210.6346227381798 1210.63297490379 63.608 3 0.1405504442706117 0.0007045974986788797 0.003759093683103495 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'nc|ENSG00000171401|P13646-2|KRT13', 'KRT13|p.Y356Lfs*25|1|0.09|ENSG00000171401|chr17:41502553-41502554|-/A|frameshift_variant', 'CON__P13646-1', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000167916|ENST00000264651|KRT24', 'CON__Q2M2I5', 'KRT26|p.E314Gfs*15|1|0.7|ENSG00000186393|chr17:40769784-40769785|-/A|frameshift_variant', 'ENSG00000186393|ENST00000335552|KRT26', 'CON__Q7Z3Y9'] 104851 7544 SRAPSQVSI True PC9_epitope_Rep5 943.50869394907 943.50758993586 33.967 2 0.1405479677808951 0.0007045974986788797 0.003759307939463258 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2', 'nc|ENSG00000166833|Q8IVL1-7|NAV2'] 73191 13239 MRYNEKELQAL True PC9_epitope_Rep5 1393.70238502817 1393.7012899358601 55.933 2 0.14054717004172376 0.0007045974986788797 0.003759376959364111 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 120414 5634 VEEPENPAA True H1975_Epitope_Rep3 954.4294405688598 954.4288949679301 26.708 1 0.1405447390712004 0.0007045974986788797 0.0037595872931801663 ['ENSG00000171316|ENST00000423902|CHD7'] 6187 14593 APNPIHLTV True PC9_epitope_Rep2 960.53926580136 960.53816993586 61.401 2 0.1405390421087199 0.0007045974986788797 0.003760080254715267 ['ENSG00000175390|ENST00000651655|EIF3F', 'ENST00000530219.1_1_11:8014470-8016722:+|nuORF'] 38300 7308 HEFLHEVPAA True H1975_Epitope_Rep1 1148.56145779792 1148.56036993586 33.119 2 0.14053761688830838 0.0007045974986788797 0.003760203589900479 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 108423 22898 SYLPFTEAF True PC9_epitope_Rep1 1073.5069626135698 1073.50637496793 92.875 1 0.14053756401102338 0.0007045974986788797 0.0037602081658521308 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 61732 9767 LLAEPVPGIK True H1975_Epitope_Rep1 1035.6328318330297 1035.6317299358602 42.5 2 0.14053485866818793 0.0007045974986788797 0.0037604422911011633 ['EEA1-UBE2N|1|fusion', 'ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL', 'EEA1-UBE2N|2|fusion'] 141965 19380 YVIELQHVV True PC9_epitope_Rep1 1098.60734536118 1098.6062499358602 79.354 2 0.14052476497880165 0.0007045974986788797 0.0037613159447308984 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000494984.5_1_3:49135981-49136101:-|nuORF'] 49341 9089 KESDIYIVA True H1975_Epitope_Rep1 1036.54407639828 1036.5429699358601 39.864 2 0.14052354058829927 0.0007045974986788797 0.003761421934847364 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 67937 11986 LTDDGDMIY True H1975_Epitope_Rep2 1041.43247734397 1041.43197496793 51.186 1 0.14050335310408232 0.0007045974986788797 0.0037631699037123426 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 92517 19541 RLYPEGLAQL True PC9_epitope_Rep3 1158.6397081186199 1158.6386099358601 80.397 2 0.14050160838746034 0.0007045974986788797 0.0037633210108697314 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 35843 12642 GTLSGWILSK True NCI_RA007_Epitope_Rep3 1060.59169529704 1060.5905899358602 56.97 2 0.14050085988667463 0.0007045974986788797 0.003763385839186952 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 106499 17114 STLHLVLRL True PC9_epitope_Rep4 1050.65496425994 1050.65386993586 73.833 2 0.14049874497838102 0.0007045974986788797 0.0037635690192537575 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 60602 7914 LHHDDPEVL True PC9_epitope_Rep5 1073.51417325233 1073.5130699358601 35.382 2 0.140498133497016 0.0007045974986788797 0.0037636219835742776 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 14054 16921 DRNAVIVAL True PC9_epitope_Rep2 969.5607295219299 969.55962993586 70.33 2 0.14049799238286226 0.0007045974986788797 0.0037636342064805814 ['nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 29736 19921 FVNDIFERI True PC9_epitope_Rep4 1151.59750895347 1151.59640993586 84.76 2 0.14049586812863815 0.0007045974986788797 0.0037638182080891084 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 86197 7038 QIGPAPPLK True NCI_RA007_Epitope_Rep4 919.5491022090699 919.54800993586 33.699 2 0.14049389824424396 0.0007045974986788797 0.0037639888462454637 ['ENSG00000084774|ENST00000264705|CAD'] 97320 5306 SEAPGQRALP True H1975_Epitope_Rep3 1024.5301576696397 1024.5290699358602 25.487 2 0.14049165580155584 0.0007045974986788797 0.0037641831036713935 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 11785 18987 DHDRFWVL True PC9_epitope_Rep4 1086.52467836638 1086.5235899358602 81.125 2 0.1404908685765206 0.0007045974986788797 0.0037642513014427754 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 96922 11666 SAVPPGTSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 50.204 2 0.1404870760905261 0.0007045974986788797 0.0037645798639153807 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 2004 5802 AEIRAINEA True NCI_RA007_Epitope_Rep4 985.51925863277 985.51816993586 28.942 2 0.14047851211436732 0.0007045974986788797 0.0037653219095821573 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 3531 12731 AGLQFPVGR True PC9_epitope_Rep6 943.5239500903898 943.52284993586 60.456 2 0.14047536103639763 0.0007045974986788797 0.0037655949785605856 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 31763 9768 GEHTLLVTV True NCI_RA007_Epitope_Rep3 967.5338460677499 967.53274993586 45.49 2 0.14046785665110326 0.0007045974986788797 0.0037662453794466456 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 48497 14060 KAIDIYEQV True PC9_epitope_Rep2 1077.57062549929 1077.5695299358601 59.36 2 0.14046572344656189 0.0007045974986788797 0.003766430283418884 ['ENSG00000105402|ENST00000263354|NAPA', 'ENST00000597778.5_1_19:47995938-47996286:-|nuORF'] 76466 13540 NQGEFKELV True PC9_epitope_Rep5 1062.53457434374 1062.53346993586 57.104 2 0.14046506403727338 0.0007045974986788797 0.003766487442157407 ['ENSG00000163220|ENST00000368738|S100A9'] 27353 17473 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55750993586 72.502 2 0.1404590242674955 0.0007045974986788797 0.0037670110198628226 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 8015 15407 ATDLDVANFY True H1975_Epitope_Rep2 1127.51350454599 1127.5124099358602 64.421 2 0.14045293964305933 0.0007045974986788797 0.003767538558894572 ['ENSG00000142252|ENST00000270257|GEMIN7'] 140341 11879 YRDPGAVDL True PC9_epitope_Rep5 1004.4927095317598 1004.49160993586 50.69 2 0.1404486276042523 0.0007045974986788797 0.00376791245847879 ['ENST00000577240.1_1_17:73264046-73266276:-|nuORF', 'nc|ENSG00000125457|A9UHW6-2|MIF4GD', 'nc|ENSG00000125457|A9UHW6-3|MIF4GD'] 52739 18496 KMMDVTVTI True PC9_epitope_Rep1 1036.5296892874399 1036.52858993586 75.936 2 0.140446538848446 0.0007045974986788797 0.003768093589025712 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 134550 14367 VYRTVIEYY True PC9_epitope_Rep6 1204.6128246644398 1204.61172993586 67.158 2 0.1404446551089688 0.0007045974986788797 0.003768256948582215 ['ENSG00000173418|ENST00000334982|NAA20'] 47886 13307 IYIGGQEHF True PC9_epitope_Rep4 1062.5134449763398 1062.5123499358601 59.081 2 0.14043510260644798 0.0007045974986788797 0.0037690854581314426 ['ENSG00000158125|ENST00000379416|XDH'] 7709 4220 ASNPATFQR True NCI_RA007_Epitope_Rep4 990.4882928576599 990.48718993586 22.544 2 0.14043222666008925 0.0007045974986788797 0.003769334930645121 ['nc|ENSG00000286140|P0CG12|DERPC'] 75829 16484 NLPDEIYHV True PC9_epitope_Rep4 1098.5345743437401 1098.53346993586 71.376 2 0.14043108043254388 0.0007045974986788797 0.0037694343641359027 ['ENSG00000148335|ENST00000372483|NTMT1'] 89722 9403 RADDTFEAL True NCI_RA007_Epitope_Rep3 1036.48253877088 1036.4814499358602 44.074 2 0.1404253797217823 0.0007045974986788797 0.0037699289307192626 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 24053 13405 EYNNNFHVL True PC9_epitope_Rep6 1148.5250722892001 1148.5239699358601 63.237 2 0.14042437120598317 0.0007045974986788797 0.003770016431454485 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 138527 20591 YHVDSLLQL True PC9_epitope_Rep1 1086.57095985246 1086.5698699358602 84.018 2 0.14042382373179976 0.0007045974986788797 0.003770063932191501 ['ENSG00000141002|ENST00000263346|TCF25'] 1359 7228 AEEAEILHSA True H1975_Epitope_Rep2 1068.5087535187201 1068.5076499358602 32.736 2 0.14041932088397008 0.0007045974986788797 0.003770454637211311 ['ENSG00000169905|ENST00000609928|TOR1AIP2', 'TOR1AIP2|p.S241Lfs*68|1|0.42|ENSG00000169905|chr1:179846764-179846764|G/-|frameshift_variant'] 77972 10038 NVNEFPVLK True H1975_Epitope_Rep3 1058.5760452328998 1058.57494993586 43.646 2 0.14041318599296307 0.0007045974986788797 0.003770987016640083 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 40985 11304 HTDVGLLEY True H1975_Epitope_Rep2 1045.50802524273 1045.5069299358602 48.529 2 0.1404097164726381 0.0007045974986788797 0.00377128813097095 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 69808 14938 LVGIDIFTGK True NCI_RA007_Epitope_Rep1 1061.61209638845 1061.61098993586 62.167 2 0.14040779785016227 0.0007045974986788797 0.0037714546554972 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 7340 22626 ARPPWMWVL True PC9_epitope_Rep5 1154.60590589254 1154.6048099358602 92.03 2 0.14040362227045197 0.0007045974986788797 0.0037718170950993557 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 90116 6455 REAQSLISA True NCI_RA007_Epitope_Rep4 973.5192586327698 973.51816993586 31.428 2 0.1404027892998442 0.0007045974986788797 0.0037718894009355283 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 21309 13682 EREQVIAAL True PC9_epitope_Rep1 1027.5662088251897 1027.5651099358602 57.481 2 0.1404015876117376 0.0007045974986788797 0.0037719937156364155 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 119743 16621 VAYEAPSL True PC9_epitope_Rep5 848.4279840168799 848.42743496793 68.938 1 0.14040007201753985 0.0007045974986788797 0.003772125283598566 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 26243 12680 FHEGDAYVV True PC9_epitope_Rep5 1035.4661604307498 1035.4650699358601 53.779 2 0.14039139013184868 0.0007045974986788797 0.0037728790413481786 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 21675 5748 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 26.927 2 0.14039082745930367 0.0007045974986788797 0.0037729278974984377 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 141391 8958 YTEGAELVD True H1975_Epitope_Rep3 995.4447562798299 995.4442049679301 39.452 1 0.14038337214396232 0.0007045974986788797 0.003773575292366122 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 46875 22794 ITLEDLEQL True PC9_epitope_Rep1 1072.5652057656798 1072.5641099358602 92.488 2 0.14037522995599935 0.0007045974986788797 0.003774282458766809 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 96025 17244 RYLPKGFLNQF True PC9_epitope_Rep6 1381.7506555499297 1381.7490149037899 78.926 3 0.14036618532014586 0.0007045974986788797 0.0037750681586928383 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 67996 9059 LTDFQKAVY True H1975_Epitope_Rep1 1083.5600608155898 1083.5589699358602 39.754 2 0.14035481288449 0.0007045974986788797 0.003776056302710703 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'ERCC6L2|p.L402Afs*12|1|0.74|ENSG00000182150|chr9:96012835-96012836|-/T|frameshift_variant', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 9868 11565 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 52.245 2 0.14035149320486592 0.0007045974986788797 0.003776344795991556 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 21187 6833 ERDM[Oxidation]SNVSL True PC9_epitope_Rep5 1065.47607387189 1065.4749699358601 31.255 2 0.1403498922469609 0.0007045974986788797 0.003776483933369788 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 21771 15507 ERVPINDVL True PC9_epitope_Rep2 1053.58185888933 1053.5807699358602 64.921 2 0.1403430369223528 0.0007045974986788797 0.0037770797790742925 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 2496 4097 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 20.849 2 0.14034281385845457 0.0007045974986788797 0.0037770991687317407 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 69623 13036 LVDPSVYGY True H1975_Epitope_Rep1 1011.49131254943 1011.4907749679301 55.228 1 0.14034266565031434 0.0007045974986788797 0.0037771120516646643 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 71335 23753 LYQILQGIVF True PC9_epitope_Rep5 1192.6855956818797 1192.68448993586 96.348 2 0.14034196087460035 0.0007045974986788797 0.0037771733146058583 ['ENSG00000170312|ENST00000395284|CDK1'] 96258 20255 RYQFLEEAF True PC9_epitope_Rep1 1201.57677350889 1201.57566993586 82.74 2 0.14033828033651558 0.0007045974986788797 0.003777493263011446 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 87885 14883 QRIDEFESM True PC9_epitope_Rep3 1153.5073736197298 1153.50626993586 62.383 2 0.1403379465198258 0.0007045974986788797 0.003777522282955051 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 54324 9137 KYDPNVYSI True NCI_RA007_Epitope_Rep3 1097.53932537101 1097.53822993586 43.026 2 0.14033771410564322 0.0007045974986788797 0.003777542487726813 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 85996 19668 QHLPYIQIL True PC9_epitope_Rep4 1123.6389798426299 1123.6378899358601 83.772 2 0.14033015107000127 0.0007045974986788797 0.0037782000336389504 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 47307 14298 IVDSLTEMY True H1975_Epitope_Rep2 1069.5001629809701 1069.49957496793 60.148 1 0.140328836933924 0.0007045974986788797 0.0037783142989069726 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 128754 20931 VPYLVGQVV True PC9_epitope_Rep1 972.5644179200399 972.56332993586 85.332 2 0.1403248255389042 0.0007045974986788797 0.0037786631143575536 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 84834 5375 QEAIENGIHSA True H1975_Epitope_Rep2 1167.55201531303 1167.55090993586 25.714 2 0.1403236494860043 0.0007045974986788797 0.0037787653854355115 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'ENST00000515125.5_1_5:74018372-74021901:-|nuORF'] 109296 19856 TAVPSLFSV True PC9_epitope_Rep6 919.50148331031 919.50038993586 89.035 2 0.14031935240293467 0.0007045974986788797 0.003779139088651193 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 129087 11848 VQPSKYHFL True PC9_epitope_Rep5 1117.5920296502102 1117.59092993586 50.572 2 0.14031667190684577 0.0007045974986788797 0.00377937222115281 ['ENSG00000177383|ENST00000317897|MAGEF1'] 134034 8104 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5287299358602 40.701 2 0.1403136438985044 0.0007045974986788797 0.0037796355952062948 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 91617 19378 RIPAYFVTV True PC9_epitope_Rep2 1064.60186605792 1064.6007699358602 79.915 2 0.1403127198446202 0.0007045974986788797 0.003779715972391335 ['ENSG00000204394|ENST00000375663|VARS1', 'ENST00000461874.1_1_6:31749609-31749932:-|nuORF', 'ENST00000483275.1_1_6:31749724-31750195:-|nuORF'] 10161 9264 AYVHM[Oxidation]VTHF True PC9_epitope_Rep5 1119.5171508382302 1119.51604993586 40.582 2 0.1403097944890723 0.0007045974986788797 0.003779970440416624 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 1499 14996 AEELRLLLP True H1975_Epitope_Rep2 1052.62299542532 1052.62188993586 62.834 2 0.14030738738474866 0.0007045974986788797 0.003780179840035403 ['ENST00000566833.1_1_15:43477651-43481519:+|nuORF', 'ENST00000564630.5_1_15:43477651-43478217:+|nuORF', 'nc|ENSG00000166946|O95273-2|CCNDBP1', 'ENSG00000166946|ENST00000300213|CCNDBP1'] 11922 12421 DHMDGSYSL True PC9_epitope_Rep5 1023.3967605415901 1023.3956699358599 52.776 2 0.14030010915781743 0.0007045974986788797 0.0037808130599115294 ['ENSG00000112290|ENST00000392589|WASF1'] 29416 16869 FVDRGFYSV True PC9_epitope_Rep5 1088.52909504048 1088.5279899358602 69.897 2 0.14029660733632052 0.0007045974986788797 0.0037811177626404097 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 101520 19920 SLLENLEKI True PC9_epitope_Rep4 1057.60192562757 1057.60082993586 84.756 2 0.1402939830334293 0.0007045974986788797 0.00378134612611425 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 78417 8861 NYLSHHLTI True NCI_RA007_Epitope_Rep4 1096.5665431783602 1096.5654499358602 40.905 2 0.14029288966561929 0.0007045974986788797 0.003781441273613682 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 100969 20048 SLFPGKLEVV True PC9_epitope_Rep2 1087.62774645259 1087.62664993586 82.52 2 0.14028794780008727 0.0007045974986788797 0.0037818713562529083 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 62322 17835 LLGELLQDNAK True PC9_epitope_Rep1 1212.67140216972 1212.6703099358601 73.397 2 0.1402866329732864 0.0007045974986788797 0.0037819857916879533 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 69510 14245 LVAVELEKV True PC9_epitope_Rep6 998.6011973515799 998.60010993586 66.685 2 0.14026541836431777 0.0007045974986788797 0.003783832671351361 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 87341 9609 QPSEVLRTV True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 42.303 2 0.14026515838722614 0.0007045974986788797 0.0037838553097136736 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 130165 10537 VSEDSSVTQIY True H1975_Epitope_Rep2 1226.56666231766 1226.56607496793 45.552 1 0.1402638688745445 0.0007045974986788797 0.0037839676002657924 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 112174 10504 TKEVNSGFFY True H1975_Epitope_Rep1 1190.5607890915799 1190.56027496793 45.359 1 0.1402578778096065 0.0007045974986788797 0.0037844893445340266 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 104230 14434 SQHGVIIQL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 63.428 2 0.14025771041491356 0.0007045974986788797 0.003784503923470595 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 34703 8398 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 37.268 2 0.140252915491951 0.0007045974986788797 0.0037849215522059334 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 24818 16396 FAVAPNQNL True PC9_epitope_Rep5 972.50288029264 972.50178993586 68.066 2 0.14024994098127663 0.0007045974986788797 0.0037851806494248338 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 129290 20068 VQVPVPVTV True PC9_epitope_Rep5 936.5644179200399 936.56386496793 82.244 1 0.14024113378277253 0.0007045974986788797 0.003785947910838623 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 108660 12154 SYQGKGFVM True PC9_epitope_Rep5 1015.4797023199098 1015.47860993586 51.74 2 0.14023722282881382 0.0007045974986788797 0.003786288672922746 ['ENSG00000130202|ENST00000252483|NECTIN2'] 139093 16057 YLDIGQVYY True H1975_Epitope_Rep2 1132.54407639828 1132.5429699358601 66.965 2 0.1402345962656762 0.0007045974986788797 0.003786517542878705 ['ENSG00000006555|ENST00000371276|TTC22'] 104124 3885 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 21.125 2 0.1402340486041961 0.0007045974986788797 0.003786565266001915 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 132821 19047 VVLGEFGVRNV True PC9_epitope_Rep5 1187.6662572196299 1187.6651699358601 78.292 2 0.14022980512071756 0.0007045974986788797 0.003786935062596436 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 32563 6438 GGGQIIPTAR True NCI_RA007_Epitope_Rep1 968.5403284305199 968.53922993586 29.063 2 0.14021897292880894 0.0007045974986788797 0.003787879191740495 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 121506 6303 VEYSEEELK True H1975_Epitope_Rep3 1124.5237348765197 1124.52262993586 29.249 2 0.14021654566816538 0.0007045974986788797 0.00378809078271638 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 124993 15732 VHYGEVVQL True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 65.336 2 0.14021373946452864 0.0007045974986788797 0.003788335421793797 ['ENSG00000127080|ENST00000287996|IPPK'] 114890 8439 TQSEKQFVV True PC9_epitope_Rep2 1064.55022440788 1064.54912993586 37.83 2 0.140202554495773 0.0007045974986788797 0.0037893106600225533 ['ENSG00000163902|ENST00000296255|RPN1'] 96086 20096 RYLTVATVF True PC9_epitope_Rep1 1068.59678067748 1068.59568993586 82.127 2 0.14019927749643624 0.0007045974986788797 0.0037895964348156974 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 38011 19254 HAMTEFLEV True PC9_epitope_Rep2 1075.50083168731 1075.4997299358602 79.433 2 0.14019823049579408 0.0007045974986788797 0.0037896877443081294 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 136275 12187 WSDIPTDQY True H1975_Epitope_Rep2 1123.4822044177101 1123.48110993586 51.959 2 0.14019615361481974 0.0007045974986788797 0.0037898688766740754 ['ENSG00000117408|ENST00000372343|IPO13'] 89524 13144 QYLGQIQHI True PC9_epitope_Rep4 1098.5821932425 1098.58108993586 58.453 2 0.14019324401873473 0.0007045974986788797 0.003790122647592677 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 24920 9998 FC[Carbamidomethyl]GGSLINSQ True H1975_Epitope_Rep1 1081.48624453176 1081.4851499358601 43.393 2 0.1401926778014611 0.0007045974986788797 0.003790172034232269 ['CON__P00761'] 132373 16938 VVAEELENV True PC9_epitope_Rep1 1000.50769088956 1000.50658993586 69.975 2 0.1401914659483702 0.0007045974986788797 0.0037902777367040787 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.I97V|1|0.22|ENSG00000167196|chr15:75913212-75913212|A/G|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 90635 4613 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 22.867 3 0.14018423973753907 0.0007045974986788797 0.00379090809516619 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 7337 22248 ARPPWMWVL True PC9_epitope_Rep2 1154.60590589254 1154.6048099358602 91.054 2 0.14018231940010972 0.0007045974986788797 0.003791075627949687 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 13813 9841 DQLADLYK True NCI_RA007_Epitope_Rep2 964.4865615221601 964.48546993586 42.904 2 0.14018172530636042 0.0007045974986788797 0.0037911274589622432 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 48531 19803 KALDGFVMV True PC9_epitope_Rep3 978.5208388558999 978.51974993586 81.405 2 0.14017356791417343 0.0007045974986788797 0.0037918392121082294 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 40713 8018 HRTDSEIAL True PC9_epitope_Rep1 1040.5250722892 1040.5239699358601 35.662 2 0.14017192194018477 0.0007045974986788797 0.0037919828435670124 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 61057 20574 LIGEFLEKV True PC9_epitope_Rep5 1046.60119735158 1046.60010993586 84.185 2 0.14016844313329577 0.0007045974986788797 0.0037922864299623996 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 114089 4760 TPFQGQGHGA True PC9_epitope_Rep5 998.4569927293797 998.45588993586 23.357 2 0.1401679941181394 0.0007045974986788797 0.0037923256160980285 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 97803 4777 SELEMAKA True NCI_RA007_Epitope_Rep3 877.4215187374499 877.4204299358599 25.752 2 0.14016311650035665 0.0007045974986788797 0.0037927513179918868 ['ENSG00000267796|ENST00000301159|LIN37'] 77514 10722 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4603699358602 46.269 2 0.14015720477578 0.0007045974986788797 0.0037932673366954067 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 96231 15191 RYQDAIRVF True PC9_epitope_Rep3 1166.6196413803798 1166.61799490379 63.577 3 0.14015709638760704 0.0007045974986788797 0.0037932767982600474 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 77105 13683 NRLTFASTL True PC9_epitope_Rep6 1021.55564414149 1021.55454993586 64.416 2 0.14015050071130403 0.0007045974986788797 0.003793852600831933 ['ENSG00000047315|ENST00000314595|POLR2B'] 101848 12973 SLPKGVVEV True PC9_epitope_Rep1 926.54368247546 926.54258993586 54.773 2 0.1401494206795389 0.0007045974986788797 0.0037939468958631565 ['ENSG00000149257|ENST00000358171|SERPINH1'] 138157 20429 YGLPVVVKL True PC9_epitope_Rep5 986.6164534929 986.61534993586 83.617 2 0.1401491034316471 0.0007045974986788797 0.003793974594471185 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 39710 4264 HLTGEFEK True NCI_RA007_Epitope_Rep4 959.47124581119 959.47014993586 22.731 2 0.1401490460685044 0.0007045974986788797 0.0037939796028133494 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 78327 19685 NYISGIQTI True PC9_epitope_Rep2 1007.52876068731 1007.52766993586 81.104 2 0.14013835387412155 0.0007045974986788797 0.0037949132464417633 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 43940 12034 IIDLVLDR True H1975_Epitope_Rep1 955.57023157647 955.56912993586 51.298 2 0.1401359385665022 0.0007045974986788797 0.003795124182903055 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 14136 8451 DSDGAQDYY True H1975_Epitope_Rep2 1032.3672342351201 1032.3666749679298 37.459 1 0.14013207065349484 0.0007045974986788797 0.003795462004195626 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000562988.5_1_16:2052496-2059683:-|nuORF', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 141398 13573 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep1 1147.5107280451098 1147.51017496793 57.335 1 0.1401316284090265 0.0007045974986788797 0.0037955006314710407 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 39436 5236 HKVPGDVSL True NCI_RA007_Epitope_Rep5 950.5185303567799 950.51742993586 26.837 2 0.14012660670791974 0.0007045974986788797 0.003795939272837777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 87881 15454 QRIDEFEAM True PC9_epitope_Rep5 1137.5124590001699 1137.51136993586 64.454 2 0.1401225047515981 0.0007045974986788797 0.0037962976125504796 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 43694 16155 IHDNGEFYL True PC9_epitope_Rep2 1106.50327421546 1106.5021699358601 67.395 2 0.1401212440075706 0.0007045974986788797 0.003796407755673566 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 103072 4773 SPGLQKEAV True PC9_epitope_Rep4 927.5025459394699 927.50144993586 24.931 2 0.14011762390048013 0.0007045974986788797 0.0037967240388245625 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 105560 15484 SSDFDPLVY True H1975_Epitope_Rep1 1041.46549172441 1041.46497496793 64.831 1 0.1401079625859895 0.0007045974986788797 0.003797568260759884 ['nc|ENSG00000108375|Q68DV7-3|RNF43', 'nc|ENSG00000108375|Q68DV7-2|RNF43', 'ENSG00000108375|ENST00000407977|RNF43', 'nc|ENSG00000108375|Q68DV7-4|RNF43'] 14961 8876 DYFEQYGK True NCI_RA007_Epitope_Rep3 1048.4501760134401 1048.44906993586 42.005 2 0.14010519590039142 0.0007045974986788797 0.003797810052671165 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 107875 19809 SVVKVLTEL True PC9_epitope_Rep3 986.6011973515799 986.60010993586 81.429 2 0.1400927644261184 0.0007045974986788797 0.0037988966780912996 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 111530 20914 TIAEGLTLAQV True PC9_epitope_Rep5 1114.62338934814 1114.6228749679299 85.5 1 0.14009129444704493 0.0007045974986788797 0.003799025188178623 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 29860 8958 FVTFDDHD True NCI_RA007_Epitope_Rep5 994.40322582102 994.40212993586 41.116 2 0.14008988020359575 0.0007045974986788797 0.003799148829752711 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 89275 5344 QVVSPGVYK True NCI_RA007_Epitope_Rep3 975.5389314481898 975.53782993586 28.029 2 0.14008895580254416 0.0007045974986788797 0.0037992296485460553 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B'] 141937 17565 YVFPGVTRL True PC9_epitope_Rep6 1050.58621599378 1050.5851099358601 80.204 2 0.14008600846845745 0.0007045974986788797 0.003799487340270366 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 67997 9346 LTDFQKAVY True H1975_Epitope_Rep2 1083.5600608155898 1083.5589699358602 40.91 2 0.1400814488645507 0.0007045974986788797 0.0037998860303206203 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'ERCC6L2|p.L402Afs*12|1|0.74|ENSG00000182150|chr9:96012835-96012836|-/T|frameshift_variant', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 84206 21772 PYLDSFYEY True PC9_epitope_Rep3 1195.5073565363898 1195.50624993586 89.043 2 0.14008104897855223 0.0007045974986788797 0.003799920998179318 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 53108 7487 KPSGTTISVTA True PC9_epitope_Rep5 1060.57643915572 1060.57534993586 33.749 2 0.14007927331092088 0.0007045974986788797 0.0038000762745215564 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 85767 8831 QHDPETSVL True PC9_epitope_Rep3 1024.48253877088 1024.4814499358602 38.918 2 0.1400771274201527 0.0007045974986788797 0.0038002639340607657 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 118655 13196 TYSPALNKM[Oxidation]F True PC9_epitope_Rep5 1186.5692459807399 1186.5681499358602 55.765 2 0.1400748809891499 0.0007045974986788797 0.0038004603957481017 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 115078 15066 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61278993586 63.208 2 0.1400709728604788 0.0007045974986788797 0.0038008022052392547 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 140748 11159 YSDDNPYYNY True H1975_Epitope_Rep2 1312.48841199696 1312.4878749679299 47.961 1 0.1400692864006897 0.0007045974986788797 0.003800949714388861 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 103936 17306 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51289496793 71.827 1 0.1400398770331026 0.0007045974986788797 0.0038035229683562937 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 111383 7024 THSDIQVKL True PC9_epitope_Rep6 1039.56620882519 1039.5651099358602 36.017 2 0.1400360056135226 0.0007045974986788797 0.0038038618374855826 ['ENSG00000105223|ENST00000409735|PLD3'] 114230 5090 TPMGPGRTV True PC9_epitope_Rep4 914.46438660894 914.46328993586 26.23 2 0.1400319369785273 0.0007045974986788797 0.0038042180013162998 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 37903 7413 GYSFTTTAER True NCI_RA007_Epitope_Rep2 1131.51965255559 1131.5185499358602 33.46 2 0.14002689641811725 0.0007045974986788797 0.0038046592922611204 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 46710 5769 ITDVKPGNY True H1975_Epitope_Rep3 1005.51311062317 1005.51200993586 27.217 2 0.14002471328527374 0.0007045974986788797 0.003804850436902029 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'ENSG00000115318|ENST00000264094|LOXL3', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3'] 115040 13666 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 60.458 2 0.1400158344464965 0.0007045974986788797 0.0038056279235003615 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 134847 19261 VYVEKISFL True PC9_epitope_Rep4 1096.6168474157198 1096.61574993586 82.19 2 0.14001361690192463 0.0007045974986788797 0.003805822130128011 ['ENSG00000171017|ENST00000306708|LRRC8E'] 140086 19403 YQLEIPENFTT True PC9_epitope_Rep6 1353.6452469915296 1353.64414993586 87.288 2 0.14001113719148323 0.0007045974986788797 0.0038060393081734032 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 84282 19001 PYPPPPPEF True PC9_epitope_Rep2 1039.5014833103098 1039.50038993586 78.453 2 0.14000682152474692 0.0007045974986788797 0.003806417312264043 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 8690 7839 AVALPLQTK True NCI_RA007_Epitope_Rep3 939.57531695691 939.57420993586 37.957 2 0.1400009350684429 0.0007045974986788797 0.0038069329599147916 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 14973 11378 DYFEQYGK True PC9_epitope_Rep6 1048.4501760134401 1048.44906993586 54.813 2 0.13999199997332618 0.0007045974986788797 0.003807715797544349 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 6960 9160 AQLAHIQAL True NCI_RA007_Epitope_Rep4 963.55016483823 963.54906993586 42.073 2 0.13998740083883449 0.0007045974986788797 0.0038081188073760723 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 35845 13114 GTLSGWILSK True NCI_RA007_Epitope_Rep5 1060.59169529704 1060.5905899358602 57.121 2 0.13997974470806374 0.0007045974986788797 0.003808789787352373 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 743 6491 AAVNHISQL True H1975_Epitope_Rep2 951.51377932951 951.51268993586 29.884 2 0.13996593535016225 0.0007045974986788797 0.0038100003297243724 ['ENSG00000120029|ENST00000370033|ARMH3', 'ENST00000495001.1_1_10:103607287-103649300:-|nuORF', 'nc|ENSG00000120029|Q5T2E6-2|ARMH3'] 7240 17009 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 70.248 2 0.13996521221552866 0.0007045974986788797 0.003810063730946702 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 1309 5258 AEDRQVSITA True H1975_Epitope_Rep2 1088.5462016566 1088.5451099358602 25.293 2 0.1399643573996677 0.0007045974986788797 0.003810138678740665 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 28868 13928 FTDEEVDELY True H1975_Epitope_Rep3 1258.52412879934 1258.5230299358602 58.887 2 0.13996208123282852 0.0007045974986788797 0.0038103382536212186 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 43752 17704 IHIITGVAV True PC9_epitope_Rep3 921.5647522732099 921.56364993586 73.295 2 0.13996142354093036 0.0007045974986788797 0.0038103959221411797 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 115359 19820 TRIWQDVQL True PC9_epitope_Rep1 1157.6193070272097 1157.61820993586 81.052 2 0.13995908546052582 0.0007045974986788797 0.0038106009394789763 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 103949 17447 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51234993586 72.109 2 0.13995088913133422 0.0007045974986788797 0.0038113197306001616 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 35292 16821 GRHGVFLEL True PC9_epitope_Rep5 1026.5610638750998 1026.5599699358602 69.712 2 0.13994983755746238 0.0007045974986788797 0.0038114119598953054 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 44429 13449 ILHENFTTV True PC9_epitope_Rep2 1072.55530978832 1072.5542099358602 57.011 2 0.1399449665843371 0.0007045974986788797 0.0038118392021149698 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 28564 13482 FSETISAYY True H1975_Epitope_Rep2 1079.4811417885498 1079.48004993586 56.991 2 0.1399434126775182 0.0007045974986788797 0.0038119755081908596 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'nc|ENSG00000258366|Q9NZ71-8|RTEL1', 'nc|ENSG00000258366|Q9NZ71-4|RTEL1'] 90435 6184 REINTILKA True NCI_RA007_Epitope_Rep5 1056.62914343492 1056.6280499358602 30.466 2 0.13994255055894744 0.0007045974986788797 0.0038120511338557692 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'nc|ENSG00000008128|Q9UQ88-9|CDK11A', 'ENST00000598846.1_1_1:1635046-1639660:-|nuORF', 'ENST00000474916.1_1_1:1636243-1639664:-|nuORF', 'ENST00000468800.5_1_1:1635923-1638967:-|nuORF', 'ENST00000492390.5_1_1:1636243-1639660:-|nuORF'] 58747 9922 LESDKTFIP True H1975_Epitope_Rep2 1048.54407639828 1048.5429699358601 43.154 2 0.13994180707868017 0.0007045974986788797 0.0038121163536767636 ['ENSG00000162851|ENST00000366514|TFB2M'] 26874 7875 FLDESRSTQY True H1975_Epitope_Rep3 1244.567331024 1244.5667749679299 35.267 1 0.13993831926742784 0.0007045974986788797 0.0038124223273655177 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 75186 18270 NIANHFFTV True PC9_epitope_Rep4 1061.52942939365 1061.52832993586 78.347 2 0.13993220809109577 0.0007045974986788797 0.0038129584985294833 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 121825 17028 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 70.516 2 0.13993149454776785 0.0007045974986788797 0.0038130211069547565 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 45876 8943 ISDSDYQAEY True H1975_Epitope_Rep1 1189.47751296009 1189.4764099358601 39.303 2 0.13992215461628665 0.0007045974986788797 0.0038138407144140216 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 106134 8041 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58028490379 35.903 3 0.13991732308252314 0.0007045974986788797 0.003814264764739295 ['ENSG00000168090|ENST00000303904|COPS6'] 95721 19299 RYGDVFQI True PC9_epitope_Rep1 996.5028802926399 996.50178993586 79.038 2 0.13991565174201437 0.0007045974986788797 0.003814411464538743 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 25734 7020 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 31.927 2 0.1399132533144012 0.0007045974986788797 0.0038146219932576574 ['ENSG00000084774|ENST00000264705|CAD'] 106646 6713 STSQTFIYK True NCI_RA007_Epitope_Rep5 1073.5393253710097 1073.53822993586 32.495 2 0.1399107227971841 0.0007045974986788797 0.003814844128995278 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 134656 17818 VYSQIPAAVKL True PC9_epitope_Rep3 1187.6914093383098 1187.6903099358601 73.735 2 0.1399082483303647 0.0007045974986788797 0.0038150613568706223 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 63553 12617 LM[Oxidation]DHTIPEV True PC9_epitope_Rep3 1069.51139675145 1069.51028993586 53.555 2 0.13990395386254115 0.0007045974986788797 0.0038154383876355946 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 110940 12407 THAAQQILL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 52.585 2 0.13989266487067373 0.0007045974986788797 0.0038164296754279164 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 134258 19256 VYNENLVHMI True PC9_epitope_Rep3 1230.60669373818 1230.60558993586 79.289 2 0.13989114393249072 0.0007045974986788797 0.003816563248706768 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 115337 17144 TRIGLINDM True PC9_epitope_Rep1 1031.54336520563 1031.54226993586 70.767 2 0.13988704153957754 0.0007045974986788797 0.003816923556056031 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 77608 6756 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 30.939 2 0.13988094641528265 0.0007045974986788797 0.0038174589444170954 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 33141 11738 GISRQGIIAV True PC9_epitope_Rep6 1012.6029286870798 1012.60182993586 56.305 2 0.13987920894942954 0.0007045974986788797 0.003817611574949475 ['ENSG00000005100|ENST00000225296|DHX33'] 100494 22078 SLAQYLINV True PC9_epitope_Rep2 1019.5651461960299 1019.56404993586 90.395 2 0.13987692555415537 0.0007045974986788797 0.003817812172741114 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 31588 12561 GEEMPGLSV True H1975_Epitope_Rep2 917.4164333570099 917.4158849679301 53.411 1 0.13987637965216612 0.0007045974986788797 0.0038178601321404763 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 47827 20541 IYGYVAEQF True PC9_epitope_Rep1 1088.5178616504397 1088.51676993586 83.823 2 0.1398647448693825 0.0007045974986788797 0.0038188824304671875 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 104664 14739 SQTLVSQGL True PC9_epitope_Rep1 931.4974605590301 931.49691496793 61.512 1 0.139862499212717 0.0007045974986788797 0.0038190797778875794 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 28127 16399 FRAPQVMTY True PC9_epitope_Rep1 1111.54845058607 1111.5473499358602 67.902 2 0.1398585275916701 0.0007045974986788797 0.0038194288271161726 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263', 'CCDC113|p.V325I|1|0.42|ENSG00000103021|chr16:58278563-58278563|G/A|missense_variant'] 78507 14787 NYPETLGRLLI True NCI_RA007_Epitope_Rep3 1287.7186867153098 1287.7175899358601 65.587 2 0.1398577926813782 0.0007045974986788797 0.003819493418785931 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 106115 12025 STDHIPILY True H1975_Epitope_Rep3 1057.54441075145 1057.5433099358602 51.415 2 0.13984990432816888 0.0007045974986788797 0.00382018679865273 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 11790 15874 DHDSSEYLL True PC9_epitope_Rep5 1077.46146897313 1077.4603699358602 66.051 2 0.13984289534215624 0.0007045974986788797 0.003820802987498211 ['ENSG00000075461|ENST00000262138|CACNG4'] 113654 14157 TLVYHVVGV True PC9_epitope_Rep6 985.5596668927699 985.55856993586 66.324 2 0.13983980487983985 0.0007045974986788797 0.003821074714061195 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 62372 19826 LLGPPPVGV True PC9_epitope_Rep5 847.51673945163 847.51564993586 81.307 2 0.13983865732052825 0.0007045974986788797 0.0038211756172212706 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 76484 8188 NQIDHEVTV True PC9_epitope_Rep4 1053.50908787189 1053.50798993586 38.954 2 0.13982450500368265 0.0007045974986788797 0.0038224202261827513 ['ENSG00000112159|ENST00000369393|MDN1'] 801 8652 AAYEHFETM True NCI_RA007_Epitope_Rep3 1097.4487961144498 1097.4476899358601 41.112 2 0.13982146024041173 0.0007045974986788797 0.003822688046830565 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 8658 19889 AVAELNYGL True PC9_epitope_Rep5 948.4916469026 948.49054993586 81.555 2 0.1398195016634083 0.0007045974986788797 0.0038228603351946 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 5556 19819 AMSSKFFLV True PC9_epitope_Rep2 1028.5364889200398 1028.5353899358602 81.623 2 0.1398169610975385 0.0007045974986788797 0.003823083830307751 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 142606 16820 YYLTPDGQRF True PC9_epitope_Rep5 1258.59823722946 1258.5971499358602 69.708 2 0.13981636038708295 0.0007045974986788797 0.0038231366770616307 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 18883 12006 ELDTPINY True H1975_Epitope_Rep3 963.4549270407099 963.4543749679301 51.342 1 0.13981385809527702 0.0007045974986788797 0.0038233568208530765 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 69544 13439 LVDDPLEY True H1975_Epitope_Rep1 962.4596780679799 962.45912496793 56.807 1 0.1398072200601812 0.0007045974986788797 0.003823940875235881 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 41121 16272 HTVGELIEV True PC9_epitope_Rep2 995.5287606873098 995.52766993586 67.832 2 0.1398064228153442 0.0007045974986788797 0.00382401102759345 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 45850 8402 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 37.271 1 0.13980035774135302 0.0007045974986788797 0.0038245447563895318 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 76477 9281 NQGPHSPIL True PC9_epitope_Rep5 961.4981292653699 961.49702993586 40.648 2 0.13979926044073684 0.0007045974986788797 0.003824641327141989 ['ENSG00000100147|ENST00000255784|CCDC134'] 2062 5228 AELDDTPM[Oxidation]R True PC9_epitope_Rep1 1062.46517483502 1062.4640699358602 24.959 2 0.13978895256970647 0.0007045974986788797 0.00382554861570567 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 95901 22241 RYLDLFTSF True PC9_epitope_Rep5 1160.5866099165999 1160.58550993586 90.557 2 0.1397833392874654 0.0007045974986788797 0.003826042780913229 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 3271 5316 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 25.837 2 0.13977614407040595 0.0007045974986788797 0.0038266763042247667 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34700 8120 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 36.21 2 0.13977471011613196 0.0007045974986788797 0.0038268025732201335 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 73092 21356 MRFLAATFL True PC9_epitope_Rep2 1068.57902243836 1068.57792993586 87.614 2 0.13977336876927823 0.0007045974986788797 0.00382692069126713 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 85246 8869 QEQFNSIAA True H1975_Epitope_Rep1 1006.4719740871798 1006.47147496793 39.027 1 0.13977138776372516 0.0007045974986788797 0.0038270951438100606 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 40317 8956 HQQSIPAVL True NCI_RA007_Epitope_Rep5 991.5450794577898 991.5439899358599 41.108 2 0.13977058595166772 0.0007045974986788797 0.0038271657557221272 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 63564 14537 LMDHTIPEV True PC9_epitope_Rep4 1053.51648175145 1053.5153899358602 63.831 2 0.13976093100101802 0.0007045974986788797 0.003828016124328339 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 115175 6231 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 29.365 3 0.1397580528276511 0.0007045974986788797 0.0038282696583000174 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 48543 19978 KALQFLEEV True PC9_epitope_Rep3 1075.5913609438699 1075.59026993586 82.09 2 0.13975208755177163 0.0007045974986788797 0.0038287951834758945 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 25410 18356 FEDENFILK True PC9_epitope_Rep3 1153.5655401188499 1153.56444993586 75.818 2 0.13974790736558465 0.0007045974986788797 0.003829163489520945 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 30215 20741 FYSNIQTVI True PC9_epitope_Rep5 1083.5600608155898 1083.5589699358602 84.839 2 0.13974625888405273 0.0007045974986788797 0.0038293087428731346 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 30057 16551 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6171499358602 71.638 2 0.1397404751365941 0.0007045974986788797 0.003829818411845552 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 17801 17698 EHSLVIDTL True PC9_epitope_Rep5 1025.53932537101 1025.53822993586 73.09 2 0.13973827817459372 0.0007045974986788797 0.0038300120277056124 ['ENSG00000143256|ENST00000368010|PFDN2'] 95101 17727 RVAQLEQVYI True PC9_epitope_Rep5 1217.6768219033297 1217.67572993586 73.203 2 0.1397336594847115 0.0007045974986788797 0.0038304190994239225 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 52629 17078 KLPSNLPQL True PC9_epitope_Rep1 1008.59678067748 1008.59568993586 70.517 2 0.13972769094771184 0.0007045974986788797 0.0038309452044285163 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000504975.1_1_4:76911880-76912009:-|nuORF'] 131158 13525 VTEIMSMGY True H1975_Epitope_Rep2 1029.45110461357 1029.4500099358602 57.16 2 0.1397248700109286 0.0007045974986788797 0.0038311938847445854 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 54219 19946 KVYLEDGFAYV True PC9_epitope_Rep2 1302.6496040959798 1302.6485099358601 82.121 2 0.13972173962788467 0.0007045974986788797 0.003831469863087636 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 37521 17876 GVVEKLSVL True PC9_epitope_Rep1 942.5749826037398 942.57388993586 73.553 2 0.1397217377894843 0.0007045974986788797 0.003831470025169017 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 27472 15402 FMDPASALY True H1975_Epitope_Rep3 1013.45281886573 1013.4522749679301 64.655 1 0.1397135871122894 0.0007045974986788797 0.0038321886911407933 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 3257 5249 AGFAGDDAPR True NCI_RA007_Epitope_Rep2 975.4410083120698 975.43990993586 25.038 2 0.1397042546246895 0.0007045974986788797 0.0038330117243591142 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 96310 12308 RYSEYAEEF True PC9_epitope_Rep4 1192.5036681382796 1192.50256993586 55.155 2 0.13970000052257073 0.0007045974986788797 0.0038333869522527023 ['ENSG00000139505|ENST00000381801|MTMR6'] 125996 8211 VLDQGKITEY True H1975_Epitope_Rep3 1164.60265390356 1164.60154993586 36.566 2 0.13969660597109868 0.0007045974986788797 0.003833686390635493 ['ENSG00000135776|ENST00000344517|ABCB10'] 31882 10926 GELLFVHSA True NCI_RA007_Epitope_Rep5 971.50763131991 971.50652993586 48.666 2 0.139696447075566 0.0007045974986788797 0.003833700407612122 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 87724 14678 QRALLANAL True PC9_epitope_Rep1 968.5767139392399 968.57560993586 61.281 2 0.13969084020799027 0.0007045974986788797 0.003834195050199621 ['ENSG00000109133|ENST00000504986|TMEM33'] 55003 16071 KYQIINEEF True PC9_epitope_Rep4 1182.5920892198599 1182.59098993586 69.752 2 0.13968850915806752 0.0007045974986788797 0.003834400715999187 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 97447 13422 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.4074249679301 56.763 1 0.13968745587323633 0.0007045974986788797 0.003834493649669158 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 71024 15593 LYITEPKTI True PC9_epitope_Rep5 1076.61176203528 1076.6106699358602 64.987 2 0.13968607853364504 0.0007045974986788797 0.0038346151787805737 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 44183 21567 IIYDFEDPEM True PC9_epitope_Rep3 1270.54275606894 1270.54164993586 88.253 2 0.13968580700191174 0.0007045974986788797 0.00383463913774518 ['ENSG00000047315|ENST00000314595|POLR2B'] 99887 15786 SILSNIHEV True PC9_epitope_Rep2 1010.53965972418 1010.53856993586 65.985 2 0.13967811501062224 0.0007045974986788797 0.0038353179124700153 ['ENSG00000165029|ENST00000374736|ABCA1'] 49060 10356 KEIADYLAA True H1975_Epitope_Rep2 992.51786165044 992.51676993586 44.843 2 0.13967751140353424 0.0007045974986788797 0.0038353711824185084 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 2054 7447 AELATRALP True H1975_Epitope_Rep3 940.5341804209199 940.53308993586 33.624 2 0.13967674883633097 0.0007045974986788797 0.0038354384820726527 ['ENSG00000173801|ENST00000393931|JUP'] 14662 8820 DVFISAAER True H1975_Epitope_Rep1 1006.5083595958998 1006.50726993586 38.848 2 0.13966684943719915 0.0007045974986788797 0.0038363122504589354 ['ENSG00000008018|ENST00000262193|PSMB1'] 21904 16451 ESDLPDELLY True H1975_Epitope_Rep3 1192.54994962436 1192.54937496793 68.765 1 0.13966432577426025 0.0007045974986788797 0.0038365350325840707 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 35495 4571 GSMGSFSEK True NCI_RA007_Epitope_Rep5 928.3960322656001 928.39492993586 24.242 2 0.1396631478931008 0.0007045974986788797 0.003836639017128168 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1', 'EMC1|p.D350N|1|0.27|ENSG00000127463|chr1:19238836-19238836|C/T|missense_variant'] 90409 12551 REIEELLAEA True NCI_RA007_Epitope_Rep4 1171.6084675599898 1171.60736993586 55.294 2 0.13965703466938603 0.0007045974986788797 0.0038371787435771817 ['nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10', 'ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF'] 8146 12966 ATELQSMMY True H1975_Epitope_Rep3 1072.45691827 1072.45582993586 55.106 2 0.1396569588525132 0.0007045974986788797 0.0038371854377962054 ['ENSG00000196284|ENST00000371459|SUPT3H'] 107133 17407 SVIDHIHLI True PC9_epitope_Rep4 1045.59202965021 1045.59092993586 74.949 2 0.1396517598986447 0.0007045974986788797 0.0038376445048513602 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 71814 10757 M[Oxidation]EHPYFYTV True H1975_Epitope_Rep3 1201.5113967514499 1201.51028993586 46.456 2 0.13965100858871898 0.0007045974986788797 0.0038377108499349647 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 103954 17757 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51234993586 73.321 2 0.13964842656351464 0.0007045974986788797 0.0038379388666045728 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 41381 11557 HYDPTINKW True PC9_epitope_Rep1 1172.56145779792 1172.56036993586 49.333 2 0.1396475394414662 0.0007045974986788797 0.0038380172107716827 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 30238 22096 FYVDSDMVNEF True PC9_epitope_Rep5 1364.5594687622395 1364.5583699358601 90.024 2 0.1396455678933457 0.0007045974986788797 0.0038381913292358702 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 106825 15037 SVAQDIPKL True PC9_epitope_Rep2 969.5494961318899 969.54838993586 63.096 2 0.1396444047323093 0.0007045974986788797 0.003838294058176638 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 95766 14645 RYIANTVEL True PC9_epitope_Rep5 1077.58185888933 1077.5807699358602 61.335 2 0.1396433249687103 0.0007045974986788797 0.0038383894239972668 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 138374 12047 YHGDSDLQL True PC9_epitope_Rep5 1046.4668887067398 1046.4657899358601 51.332 2 0.13963829759927732 0.0007045974986788797 0.0038388334772964756 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 126824 17239 VLPSVLNKF True PC9_epitope_Rep6 1015.60661708519 1015.60552993586 78.908 2 0.1396344642180134 0.0007045974986788797 0.00383917210320316 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 49852 9801 KIDEHHFVAV True PC9_epitope_Rep5 1193.6193070272102 1193.61766490379 42.668 3 0.1396313653357697 0.0007045974986788797 0.003839445867971008 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 72045 19201 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 79.696 2 0.13962841895355088 0.0007045974986788797 0.003839706178355448 ['ENSG00000198712|ENST00000361739|MT-CO2'] 121558 21191 VFDPKVFTF True PC9_epitope_Rep5 1098.57498260374 1098.57388993586 86.558 2 0.13962772242634994 0.0007045974986788797 0.0038397677185016345 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 117173 22238 TVLEQVLPI True PC9_epitope_Rep3 1010.6011973515798 1010.60010993586 90.824 2 0.13962509555381356 0.0007045974986788797 0.0038399998189045555 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 88585 14013 QTDNIIYVY True H1975_Epitope_Rep2 1127.5498900547097 1127.54937496793 59.05 1 0.13962478628257727 0.0007045974986788797 0.0038400271458418093 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 95871 14227 RYLDEINLL True NCI_RA007_Epitope_Rep3 1147.62372370131 1147.62262993586 63.272 2 0.13962058901965127 0.0007045974986788797 0.0038403980313920795 ['ENSG00000060558|ENST00000262958|GNA15'] 46757 5457 ITESEEVVSR True NCI_RA007_Epitope_Rep2 1147.57208205127 1147.57098993586 25.845 2 0.1396094271327299 0.0007045974986788797 0.0038413845093606476 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 77028 21252 NRIQDLLEL True PC9_epitope_Rep1 1112.61897267404 1112.6178699358602 86.569 2 0.1396075633596065 0.0007045974986788797 0.0038415492524843347 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 58003 8221 LEHGIVPVT True H1975_Epitope_Rep3 963.5389314481899 963.53782993586 36.605 2 0.13959671543044885 0.0007045974986788797 0.003842508264435637 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'THOC5|p.S505I|1|0.59|ENSG00000100296|chr22:29517342-29517342|C/A|missense_variant'] 11911 19463 DHLLSVSL True PC9_epitope_Rep5 882.4810822189 882.47998993586 79.917 2 0.1395960763303676 0.0007045974986788797 0.003842564771521956 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 4461 12752 AIVDKVPSV True PC9_epitope_Rep2 926.54368247546 926.54258993586 54.355 2 0.1395863448655422 0.0007045974986788797 0.0038434252967285434 ['ENSG00000181789|ENST00000314797|COPG1'] 141985 21815 YVITDLTQL True PC9_epitope_Rep2 1064.57537652656 1064.57426993586 89.385 2 0.1395859475015223 0.0007045974986788797 0.003843460438533049 ['ENSG00000134070|ENST00000256458|IRAK2'] 17321 19555 EHALLAYTL True PC9_epitope_Rep5 1029.5494961318898 1029.54838993586 80.271 2 0.13958141460710546 0.0007045974986788797 0.0038438613380445833 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 39851 8557 HPADSVVSV True PC9_epitope_Rep1 909.4555957470501 909.45448993586 37.752 2 0.13958001746492385 0.0007045974986788797 0.0038439849128351564 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 138595 5849 YIDQEELNK True H1975_Epitope_Rep3 1150.5506183307 1150.5495299358602 27.512 2 0.13957666815771347 0.0007045974986788797 0.003844281169247032 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 35288 16963 GRHGVFLEL True PC9_epitope_Rep1 1026.5610638750998 1026.5599699358602 70.071 2 0.139576505107193 0.0007045974986788797 0.0038442955921389873 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 88582 13746 QTDNIIYVY True H1975_Epitope_Rep1 1127.5498900547097 1127.54937496793 58.014 1 0.13957448700236094 0.0007045974986788797 0.0038444741112354606 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 5231 23154 ALPEIFTEL True PC9_epitope_Rep5 1031.55391280599 1031.55337496793 94.05 1 0.13957152095754263 0.0007045974986788797 0.003844736498854867 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 109840 10227 TEELAYLK True PC9_epitope_Rep6 965.50696261357 965.50586993586 49.99 2 0.1395712176230977 0.0007045974986788797 0.003844763333974952 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 48503 9311 KAINQGGLTSV True PC9_epitope_Rep1 1086.6033226099 1086.6022299358601 40.671 2 0.13957090836539235 0.0007045974986788797 0.003844790693299766 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 9558 9911 AWAPKPYHKF True PC9_epitope_Rep5 1243.6502132326698 1243.64857490379 43.094 3 0.13956764450300768 0.0007045974986788797 0.0038450794515310673 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 96012 14229 RYLPDTLLL True NCI_RA007_Epitope_Rep3 1102.63864548946 1102.63754993586 63.28 2 0.139562064603763 0.0007045974986788797 0.003845573162377811 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 115202 6197 TRDSKPIAL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 28.652 2 0.13955724282205237 0.0007045974986788797 0.003845999845383999 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'CDK12|p.L551Ffs*24|1|0.28|ENSG00000167258|chr17:39471481-39471482|-/T|frameshift_variant'] 38345 7276 HEIEGTGLP True H1975_Epitope_Rep3 951.4661604307499 951.46506993586 32.962 2 0.139555761977775 0.0007045974986788797 0.0038461308957959957 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 22464 16207 ETEYSFLDY True H1975_Epitope_Rep1 1165.4815357113698 1165.48042993586 67.687 2 0.1395544998855399 0.0007045974986788797 0.0038462425907803796 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 139895 5762 YPTEDVPR True H1975_Epitope_Rep3 975.4661604307498 975.46506993586 27.189 2 0.1395533431423624 0.0007045974986788797 0.0038463449652104647 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 104290 21136 SQIISLQTL True PC9_epitope_Rep1 1001.5757108797301 1001.57517496793 86.13 1 0.1395494670078267 0.0007045974986788797 0.0038466880317058268 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 50088 5468 KKHMTAIQL True NCI_RA007_Epitope_Rep4 1068.6113851957998 1068.61028993586 27.615 2 0.13954914427798767 0.0007045974986788797 0.0038467165970439594 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1'] 73335 9763 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4684899358601 42.542 2 0.13954810761435493 0.0007045974986788797 0.0038468083552344163 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 104849 7519 SRAPSQVSI True PC9_epitope_Rep1 943.50869394907 943.50758993586 33.74 2 0.13954561649810726 0.0007045974986788797 0.0038470288602306443 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2', 'nc|ENSG00000166833|Q8IVL1-7|NAV2'] 1405 5950 AEEEPSTSATV True H1975_Epitope_Rep2 1119.49316302423 1119.4920699358602 27.87 2 0.1395454408847092 0.0007045974986788797 0.0038470444053938834 ['ENSG00000100023|ENST00000398831|PPIL2', 'ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 41072 7890 HTMEFALVK True NCI_RA007_Epitope_Rep3 1074.55320161334 1074.55210993586 38.149 2 0.1395428450286829 0.0007045974986788797 0.003847274195836087 ['ENSG00000182636|ENST00000649030|NDN'] 28489 16146 FSDVMEDLY True H1975_Epitope_Rep2 1117.4637774722498 1117.46327496793 67.317 1 0.13953811609366884 0.0007045974986788797 0.0038476928457085165 ['ENSG00000167325|ENST00000300738|RRM1'] 40042 9460 HPTEDLVVSA True PC9_epitope_Rep4 1066.5294889632999 1066.52838993586 43.997 2 0.13953769310642972 0.0007045974986788797 0.0038477302947222676 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 104924 15256 SRDDNMFQI True PC9_epitope_Rep6 1124.49205790876 1124.4909699358602 70.79 2 0.139536996151236 0.0007045974986788797 0.0038477920001719567 ['ENSG00000113387|ENST00000265073|SUB1'] 7090 10773 AQSKGIYYV True PC9_epitope_Rep1 1027.53384606775 1027.53274993586 46.326 2 0.1395344062390993 0.0007045974986788797 0.0038480213085717568 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 141161 7202 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.4183249679301 32.638 1 0.13953398899369332 0.0007045974986788797 0.0038480582523562224 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 105299 11958 SRMDGEGQLTL True PC9_epitope_Rep6 1205.5710365054497 1205.56992993586 57.253 2 0.13952681869860573 0.0007045974986788797 0.003848693180248347 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 96603 7615 SAGPAIKL True H1975_Epitope_Rep3 755.45413919507 755.45304993586 34.271 2 0.13952312605116124 0.0007045974986788797 0.003849020203771391 ['ENSG00000166897|ENST00000402918|ELFN2'] 5527 11553 AMDPVSVSY True H1975_Epitope_Rep2 967.4320834211501 967.43153496793 49.5 1 0.1395207608519756 0.0007045974986788797 0.003849229681981417 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 128641 13773 VPVEQAVSV True PC9_epitope_Rep2 926.5072969667398 926.50618993586 58.263 2 0.1395194685555046 0.0007045974986788797 0.0038493441413632577 ['ENSG00000131899|ENST00000316843|LLGL1'] 141960 19176 YVIEDDVNM True PC9_epitope_Rep5 1096.47467650912 1096.47356993586 78.797 2 0.13951547738362907 0.0007045974986788797 0.0038496976628550664 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 108924 11258 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 48.348 2 0.13951236474806464 0.0007045974986788797 0.0038499733895588743 ['ENSG00000183751|ENST00000568546|TBL3'] 106498 17024 STLHLVLRL True PC9_epitope_Rep4 1050.65496425994 1050.65386993586 73.476 2 0.13951102600368473 0.0007045974986788797 0.00385009198561534 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 105278 13718 SRLPEQVEL True PC9_epitope_Rep2 1069.57677350889 1069.57566993586 58.057 2 0.1395092191581861 0.0007045974986788797 0.0038502520553319063 ['ENSG00000177666|ENST00000336615|PNPLA2', 'nc|ENSG00000177666|Q96AD5-2|PNPLA2'] 99267 19563 SHQLDFNVL True PC9_epitope_Rep3 1071.53490869691 1071.53380993586 80.483 2 0.13950403936526237 0.0007045974986788797 0.0038507109733813796 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 97278 9251 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 40.54 1 0.13950101952153018 0.0007045974986788797 0.003850978549776234 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 21714 21189 ERSPLLFTL True PC9_epitope_Rep3 1074.60734536118 1074.6062499358602 86.791 2 0.13949985255527808 0.0007045974986788797 0.0038510819549690237 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 106250 15053 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.55917496793 63.152 1 0.13949959111497623 0.0007045974986788797 0.0038511051216414912 ['ENSG00000131459|ENST00000253778|GFPT2'] 26942 9707 FLDQNLQKY True H1975_Epitope_Rep3 1167.59242357303 1167.5913299358601 42.358 2 0.13949892433240063 0.0007045974986788797 0.0038511642070114408 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 29440 22138 FVEETVYLL True PC9_epitope_Rep2 1111.58012755383 1111.57902993586 90.633 2 0.13949615864049875 0.0007045974986788797 0.0038514092918835357 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 10179 20404 AYVVKVFSL True PC9_epitope_Rep3 1024.59571804832 1024.5946299358602 83.737 2 0.13948626344678366 0.0007045974986788797 0.0038522862920537903 ['ENSG00000125730|ENST00000245907|C3', 'ENST00000598805.2_1_19:6686670-6693093:-|nuORF'] 1918 5069 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5965849037902 24.616 3 0.13948249515968786 0.0007045974986788797 0.003852620323220716 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 21727 7145 ERSSYYKSL True PC9_epitope_Rep5 1131.55603806431 1131.55438490379 32.452 3 0.13947815956948645 0.0007045974986788797 0.0038530046771684083 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 132194 16919 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 69.903 2 0.1394697444186658 0.0007045974986788797 0.0038537507962335318 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 44529 12207 ILMEHIHKL True PC9_epitope_Rep3 1132.64268532408 1132.64104490379 51.985 3 0.13946959013484708 0.0007045974986788797 0.0038537644769558715 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 104804 22268 SQYPEIIFL True PC9_epitope_Rep4 1108.580461907 1108.57987496793 93.894 1 0.13946496356206506 0.0007045974986788797 0.0038541747487982727 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 134352 12504 VYPEKLATKF True PC9_epitope_Rep1 1194.6648602372995 1194.66322490379 52.965 3 0.1394636106279719 0.0007045974986788797 0.003854294731476124 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 18793 17848 ELDETKIIL True PC9_epitope_Rep4 1072.6015912743999 1072.6004899358602 76.689 2 0.1394570250945189 0.0007045974986788797 0.003854878811244458 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 40166 19939 HQDSTWIVL True PC9_epitope_Rep2 1097.55055876105 1097.54946993586 82.092 2 0.13945264685516653 0.0007045974986788797 0.003855267171671458 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 99594 8357 SIFDGRVVAK True NCI_RA007_Epitope_Rep2 1090.61349337078 1090.6123899358602 37.147 2 0.13945044697935563 0.0007045974986788797 0.0038554623206099813 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 61403 12879 LITPAVVSER True PC9_epitope_Rep5 1083.62880908175 1083.6277099358601 54.549 2 0.13944751428033658 0.0007045974986788797 0.0038557224928327106 ['ENSG00000118181|ENST00000527673|RPS25'] 49317 5097 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 24.72 2 0.13944679294390094 0.0007045974986788797 0.0038557864883256893 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 115821 8677 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41782993586 38.337 2 0.13944588748445255 0.0007045974986788797 0.0038558668203250886 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 119238 19872 VALDKVIEI True PC9_epitope_Rep5 998.6011973515799 998.60010993586 81.489 2 0.13944486450178495 0.0007045974986788797 0.0038559575809321367 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 134486 13091 VYPSSLSKI True PC9_epitope_Rep5 992.5542471591599 992.55314993586 55.358 2 0.13943278880905804 0.0007045974986788797 0.0038570291150524403 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 111058 17718 THDGSILIVP True PC9_epitope_Rep5 1050.57095985246 1050.5698699358602 73.169 2 0.13942931562214528 0.0007045974986788797 0.00385733736219967 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 31800 7258 GEIFSEHSC True H1975_Epitope_Rep2 1007.4018459220299 1007.40074993586 32.852 2 0.13942813551985583 0.0007045974986788797 0.003857442102446867 ['ENSG00000197961|ENST00000320451|ZNF121'] 54354 7801 KYEELQIT True NCI_RA007_Epitope_Rep3 1022.5284263341399 1022.5273299358599 37.808 2 0.13942463987362547 0.0007045974986788797 0.0038577523758569605 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 105678 16545 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.51187496793 69.136 1 0.13942453485893602 0.0007045974986788797 0.0038577616973388146 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 88056 16195 QRQQLLVSL True PC9_epitope_Rep2 1083.64004247179 1083.6389499358602 67.544 2 0.13942084371859173 0.0007045974986788797 0.0038580893504178934 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 132394 16316 VVAGRFIEV True PC9_epitope_Rep1 988.5705659296399 988.56946993586 67.578 2 0.13940366641293364 0.0007045974986788797 0.003859614498559509 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 136887 11704 YAEMGTRTF True PC9_epitope_Rep1 1074.4804305958999 1074.47932993586 49.894 2 0.13939326706944583 0.0007045974986788797 0.003860538131465036 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2', 'ENST00000467305.1_1_13:96637506-96665674:-|nuORF'] 86031 12811 QHQLIQEAL True PC9_epitope_Rep2 1078.5771078620598 1078.5760099358602 54.579 2 0.13939145252179697 0.0007045974986788797 0.0038606993156031244 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 9392 8054 AVSTFAMVK True NCI_RA007_Epitope_Rep3 952.5051887917599 952.50408993586 38.766 2 0.1393895936747025 0.0007045974986788797 0.0038608644417215824 ['ENSG00000172893|ENST00000355527|DHCR7', 'ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 26421 20015 FIAKSFYDL True PC9_epitope_Rep5 1102.5698972233 1102.5688099358601 82.039 2 0.13938752951844366 0.0007045974986788797 0.0038610478141736823 ['ENSG00000176153|ENST00000389614|GPX2'] 71028 15681 LYIVEPLKF True NCI_RA007_Epitope_Rep5 1120.6532329244399 1120.65212993586 67.032 2 0.1393874414119968 0.0007045974986788797 0.0038610556414355166 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 40063 8112 HPTWALKEA True PC9_epitope_Rep2 1051.5450794577898 1051.54398993586 36.561 2 0.13938454992711233 0.0007045974986788797 0.003861312525904268 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 70901 22623 LYEQAFQLL True PC9_epitope_Rep3 1123.5913609438699 1123.59026993586 92.287 2 0.13938425094990559 0.0007045974986788797 0.003861339088517088 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 68041 11286 LTDLEPATEY True H1975_Epitope_Rep3 1150.5393849406598 1150.5382899358601 48.518 2 0.1393797815636477 0.0007045974986788797 0.0038617361924623075 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 73034 13955 M[Oxidation]RDPIRILV True PC9_epitope_Rep2 1127.64849936095 1127.64685490379 58.952 3 0.13937618112637618 0.0007045974986788797 0.003862056119910172 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 118652 11918 TYSPALNKM[Oxidation]F True PC9_epitope_Rep4 1186.5692459807399 1186.5681499358602 53.624 2 0.13937263968864003 0.0007045974986788797 0.0038623708303941397 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 8226 8941 ATGDMSGLLK True NCI_RA007_Epitope_Rep5 991.5008316873099 991.49972993586 41.051 2 0.13937075815618508 0.0007045974986788797 0.0038625380434385483 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 97259 12176 SEAEIFYNA True H1975_Epitope_Rep2 1042.46074069714 1042.46017496793 51.918 1 0.13936071420270352 0.0007045974986788797 0.0038634307776051176 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 75733 24621 NLLDLLTEV True PC9_epitope_Rep5 1028.57537652656 1028.57426993586 99.83 2 0.13935280639076322 0.0007045974986788797 0.003864133789452568 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 17543 19245 EHGNFLITV True PC9_epitope_Rep3 1028.52909504048 1028.52857496793 79.246 1 0.1393525997033903 0.0007045974986788797 0.0038641521658517647 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 108471 17540 SYLTSASSL True PC9_epitope_Rep5 927.45492704071 927.4543749679301 72.474 1 0.1393484996615277 0.0007045974986788797 0.0038645167149913683 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 14055 17416 DRNAVIVAL True PC9_epitope_Rep3 969.5607295219299 969.55962993586 72.161 2 0.13934628288692869 0.0007045974986788797 0.0038647138304052017 ['nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 761 10384 AAVPRAAFL True H1975_Epitope_Rep2 914.5337864980999 914.53268993586 44.953 2 0.13933509177619918 0.0007045974986788797 0.0038657090951076203 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 86222 19588 QILDGVHYL True PC9_epitope_Rep1 1056.5603951687601 1056.55928993586 80.172 2 0.13933206108316357 0.0007045974986788797 0.0038659786689475674 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 17384 12377 EHDPHVLLAV True PC9_epitope_Rep4 1128.5927579262 1128.59110490379 55.415 3 0.13933145539982386 0.0007045974986788797 0.0038660325454530297 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 116738 13438 TVDNARIVL True PC9_epitope_Rep3 999.5712942056299 999.57018993586 56.736 2 0.13933118200582764 0.0007045974986788797 0.0038660568645315346 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 77870 7661 NVGAPDVTLR True H1975_Epitope_Rep1 1040.56145779792 1040.56036993586 34.443 2 0.13933065718284574 0.0007045974986788797 0.003866103549270685 ['ENSG00000124942|ENST00000378024|AHNAK'] 115771 13163 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45454993586 55.727 2 0.13932177429537423 0.0007045974986788797 0.0038668937961931853 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 21191 10033 ERDMSNVSL True PC9_epitope_Rep2 1049.48115887189 1049.48006993586 43.917 2 0.1393210762724614 0.0007045974986788797 0.0038669559010761486 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 14731 9121 DVNAAIATIK True H1975_Epitope_Rep1 1014.57095985246 1014.56986993586 39.988 2 0.13931490281685335 0.0007045974986788797 0.003867505212216025 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 116861 11737 TVEVDLFTSK True NCI_RA007_Epitope_Rep2 1137.59175486669 1137.59064993586 50.251 2 0.13931220218508983 0.0007045974986788797 0.003867745537445934 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF'] 34828 14344 GQIGMIQAL True NCI_RA007_Epitope_Rep4 929.5004377644899 929.49934993586 62.481 2 0.13931208955877303 0.0007045974986788797 0.0038677555602167476 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A2|p.G861C|1|0.16|ENSG00000018625|chr1:160136587-160136587|G/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENSG00000132681|ENST00000368081|ATP1A4'] 89723 9531 RADDTFEAL True NCI_RA007_Epitope_Rep4 1036.48253877088 1036.4814499358602 43.512 2 0.13930849489259242 0.0007045974986788797 0.003868075468018476 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 118631 17708 TYSPALNKMF True PC9_epitope_Rep2 1170.5743309807401 1170.5732299358601 73.396 2 0.139300356073899 0.0007045974986788797 0.003868799880141598 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 90903 3933 REYDGNIRQA True NCI_RA007_Epitope_Rep2 1220.5897978040798 1220.5881449037902 19.934 3 0.1392994084330826 0.0007045974986788797 0.0038688842355752606 ['ENSG00000115760|ENST00000421745|BIRC6'] 108602 20798 SYPDLLPTF True PC9_epitope_Rep6 1051.52261267771 1051.52207496793 92.767 1 0.1392916919437616 0.0007045974986788797 0.003869571196355311 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 6979 17545 AQLELISRL True PC9_epitope_Rep6 1041.61824439805 1041.6171499358602 80.127 2 0.13927518379584905 0.0007045974986788797 0.003871041240660003 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 21583 4479 ERQPGAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 23.696 2 0.13927022419703164 0.0007045974986788797 0.003871482999104445 ['ENSG00000180921|ENST00000388913|FAM83H'] 65340 18557 LRDGQILEL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 76.169 2 0.13926929498691515 0.0007045974986788797 0.003871565770710961 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 87776 18722 QRDFNMIDL True PC9_epitope_Rep4 1150.54409348162 1150.54298993586 80.096 2 0.13926922782195458 0.0007045974986788797 0.0038715717536578834 ['ENSG00000068654|ENST00000263857|POLR1A'] 37586 12755 GVVPTIQKV True PC9_epitope_Rep1 939.5753169569098 939.57420993586 53.936 2 0.13926794478664084 0.0007045974986788797 0.003871686046143538 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 62959 13376 LLPGKTYSF True PC9_epitope_Rep6 1024.5593325395998 1024.55822993586 63.119 2 0.13926733385136833 0.0007045974986788797 0.0038717404692892687 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 63017 18273 LLPSRQFGF True PC9_epitope_Rep2 1063.5814649665099 1063.58036993586 75.608 2 0.1392626016825384 0.0007045974986788797 0.0038721620445469674 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 8130 13855 ATEFIMNEY True H1975_Epitope_Rep2 1116.47976188956 1116.4786699358601 58.439 2 0.13925685637583482 0.0007045974986788797 0.003872673938445302 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 140307 15379 YRDENLVTI True PC9_epitope_Rep5 1121.57168812845 1121.5705899358602 64.164 2 0.13925247004249064 0.0007045974986788797 0.003873064795997693 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5', 'ENST00000502747.1_1_5:79454657-79462329:-|nuORF'] 91528 10552 RIEKQFLLY True H1975_Epitope_Rep2 1208.69174369148 1208.6906499358602 45.608 2 0.13923768298272024 0.0007045974986788797 0.003874382729779825 ['ENSG00000062716|ENST00000262291|VMP1'] 40123 17679 HPYLFPVAA True PC9_epitope_Rep4 1013.5334521449298 1013.53234993586 76.026 2 0.1392359478011129 0.0007045974986788797 0.0038745374113101955 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 82706 12693 PQVSALLGEED True H1975_Epitope_Rep1 1156.5611830144 1156.56008993586 53.88 2 0.13922277761912494 0.0007045974986788797 0.0038757116572439862 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF'] 52832 12234 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 51.917 2 0.13922212674514675 0.0007045974986788797 0.003875769697937407 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 44430 14581 ILHENFTTV True PC9_epitope_Rep3 1072.55530978832 1072.5542099358602 61.213 2 0.13921962708451716 0.0007045974986788797 0.003875992609360551 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 15275 8925 EAESSPFVER True PC9_epitope_Rep5 1149.5302172392899 1149.52912993586 39.275 2 0.13921682838306554 0.0007045974986788797 0.0038762422033182414 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 7375 12661 ARSELLTTV True PC9_epitope_Rep3 988.55530978832 988.55420993586 53.725 2 0.13921069887026014 0.0007045974986788797 0.0038767889015057927 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 100392 11701 SKVSILESL True NCI_RA007_Epitope_Rep3 974.56481184286 974.56370993586 53.14 2 0.13920962127805214 0.0007045974986788797 0.003876885021068171 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 134650 11597 VYSQIPAAVKL True NCI_RA007_Epitope_Rep4 1187.6914093383098 1187.6903099358601 51.555 2 0.1391998599175275 0.0007045974986788797 0.0038777558269112128 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 73363 14992 MTELPAPLSY True H1975_Epitope_Rep1 1120.5474475265598 1120.5468749679299 62.912 1 0.13919539225431246 0.0007045974986788797 0.003878154449423203 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 35861 5162 GTMKAQGVLLK True NCI_RA007_Epitope_Rep3 1144.6638146914797 1144.66216490379 27.298 3 0.1391944872237341 0.0007045974986788797 0.003878235204760284 ['nc|ENSG00000166482|P55083-2|MFAP4'] 68056 12023 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48127496793 51.327 1 0.139186887250098 0.0007045974986788797 0.003878913411584004 ['ENSG00000174231|ENST00000304992|PRPF8'] 47942 11521 IYIKQIKTF True PC9_epitope_Rep6 1152.6906810623198 1152.6890249037901 55.4 3 0.1391843390034083 0.0007045974986788797 0.003879140838444659 ['ENSG00000103479|ENST00000262133|RBL2'] 115341 16997 TRIGLINDM True PC9_epitope_Rep5 1031.54336520563 1031.54226993586 70.397 2 0.13917990446569328 0.0007045974986788797 0.0038795366451937073 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 57180 10320 LDVEIATYR True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 44.643 2 0.139173083873875 0.0007045974986788797 0.0038801454984014484 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000170423|ENST00000304620|KRT78', 'CON__Q8N1N4-2', 'CON__Q7RTT2', 'nc|ENSG00000170423|Q8N1N4-2|KRT78', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__REFSEQ:XP_932229', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'CON__Q3TTY5', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 119352 9821 VAPEEHPVLL True H1975_Epitope_Rep2 1102.60225998074 1102.60116993586 42.76 2 0.13917302631902567 0.0007045974986788797 0.0038801506365481026 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 138129 20889 YGIKDDVFLSV True PC9_epitope_Rep5 1254.64960409598 1254.6485099358601 85.403 2 0.13917226932870236 0.0007045974986788797 0.0038802182166641813 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 101611 20476 SLLQTLYKV True PC9_epitope_Rep1 1063.62774645259 1063.62664993586 83.573 2 0.13917018784464044 0.0007045974986788797 0.0038804040466276246 ['ENSG00000100401|ENST00000356244|RANGAP1'] 106862 10039 SVATGFSRV True PC9_epitope_Rep5 922.4872302284999 922.48612993586 43.594 2 0.13916227356202218 0.0007045974986788797 0.0038811106955006403 ['ENST00000248923.8_1_22:25006313-25006394:+|nuORF', 'ENST00000411974.5_3_22:25003943-25006394:+|nuORF', 'ENST00000447416.5_3_22:25003608-25006394:+|nuORF', 'ENST00000438643.6_1_22:24999197-25006394:+|nuORF', 'ENST00000432867.5_1_22:25003608-25006394:+|nuORF'] 104309 11713 SQIPAQPSV True PC9_epitope_Rep2 925.48689587533 925.48578993586 50.385 2 0.13915975642934356 0.0007045974986788797 0.0038813354714509686 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 108289 20032 SYILRPVAF True PC9_epitope_Rep3 1064.60186605792 1064.6007699358602 82.303 2 0.13915302774426622 0.0007045974986788797 0.003881936395644962 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant'] 139976 5039 YQDPHSTAV True PC9_epitope_Rep1 1016.45632402304 1016.45522993586 24.241 2 0.13915144458754514 0.0007045974986788797 0.0038820777973108725 ['ENSG00000146648|ENST00000275493|EGFR'] 45415 9535 IQGALSAY True H1975_Epitope_Rep3 821.42831837005 821.4277649679301 41.684 1 0.13914728353324526 0.0007045974986788797 0.003882449471519142 ['ENSG00000198730|ENST00000361367|CTR9'] 97314 4875 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 23.838 2 0.13913801783774116 0.0007045974986788797 0.0038832772297481845 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 8611 5133 ATYSVGMQK True NCI_RA007_Epitope_Rep4 983.4746169394699 983.47350993586 26.262 2 0.13913509971375718 0.0007045974986788797 0.003883537958852056 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'nc|ENSG00000258628|A8MT19|RHPN2P1', 'ENST00000592247.1_1_19:33470904-33481620:-|nuORF'] 109729 3905 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 20.063 2 0.13913466931883692 0.0007045974986788797 0.0038835764153274874 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 137618 9095 YEFSQRLEA True NCI_RA007_Epitope_Rep3 1141.5403880001697 1141.53928993586 42.862 2 0.1391323111664907 0.0007045974986788797 0.003883787126711131 ['ENST00000517801.5_1_8:130863079-130874553:-|nuORF', 'ENST00000523288.5_1_8:130864395-130891707:-|nuORF', 'ENSG00000153310|ENST00000694912|CYRIB'] 103835 7162 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 32.941 2 0.13913060172309089 0.0007045974986788797 0.0038839398801490924 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 30159 20377 FYPPKVELF True PC9_epitope_Rep2 1138.60628273202 1138.6051899358602 83.803 2 0.13912940803594803 0.0007045974986788797 0.003884046549867703 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 4476 20654 AIVDLIHDI True PC9_epitope_Rep4 1007.5651461960299 1007.56404993586 87.603 2 0.13911838622847644 0.0007045974986788797 0.0038850316126270395 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 62617 21777 LLLDVPTAAV True PC9_epitope_Rep1 1010.6011973515799 1010.60010993586 88.594 2 0.13911818727113168 0.0007045974986788797 0.0038850493965094835 ['ENSG00000216490|ENST00000407280|IFI30'] 87924 7934 QRLAEPSQL True PC9_epitope_Rep6 1040.56145779792 1040.56036993586 39.961 2 0.13911436116499923 0.0007045974986788797 0.003885391410232653 ['ENSG00000173801|ENST00000393931|JUP'] 25353 9058 FEADPPGQV True H1975_Epitope_Rep2 958.4396113297399 958.43850993586 39.795 2 0.1391122425348886 0.0007045974986788797 0.003885580806351785 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 99815 9764 SIKTGFQAV True PC9_epitope_Rep4 949.52328138405 949.52218993586 45.198 2 0.13911116271227897 0.0007045974986788797 0.003885677341213471 ['ENSG00000125977|ENST00000374980|EIF2S2'] 1845 2766 AEIDNIKNQRA True H1975_Epitope_Rep3 1270.6629627443401 1270.66132490379 14.724 3 0.13910892722293924 0.0007045974986788797 0.003885877198860567 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 1031 8505 AEAEPEPELA True H1975_Epitope_Rep3 1054.4818700645399 1054.48076993586 37.7 2 0.1391082475054744 0.0007045974986788797 0.0038859379691102837 ['ENSG00000141696|ENST00000393928|P3H4'] 85065 9652 QEISHLIEP True NCI_RA007_Epitope_Rep4 1064.55022440788 1064.54912993586 43.978 2 0.1391051966225208 0.0007045974986788797 0.0038862107453876906 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 5213 8870 ALPDQGIAKA True PC9_epitope_Rep1 982.5447451046199 982.54364993586 38.958 2 0.1391017362420585 0.0007045974986788797 0.0038865201573657204 ['ENSG00000089289|ENST00000356413|IGBP1'] 103108 14793 SPHGLVMVGV True PC9_epitope_Rep4 994.5269868654999 994.52588993586 64.84 2 0.1390989312997228 0.0007045974986788797 0.0038867709808579477 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 140433 20827 YRGIFPVL True PC9_epitope_Rep5 963.5541875895099 963.55308993586 85.16 2 0.13909267522827187 0.0007045974986788797 0.0038873304688999354 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 29547 6877 FVIATSTK True NCI_RA007_Epitope_Rep1 865.49091862661 865.48982993586 30.755 2 0.13908915682736306 0.0007045974986788797 0.003887645158795312 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 37104 12421 GVPSTAIREI True PC9_epitope_Rep2 1041.5818588893299 1041.5807699358602 53.085 2 0.13908860494174285 0.0007045974986788797 0.0038876945223802937 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 87887 14744 QRIDEFESM True PC9_epitope_Rep5 1153.5073736197298 1153.50626993586 61.712 2 0.13908505318903266 0.0007045974986788797 0.00388801222488593 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 131104 12078 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.52277496793 51.471 1 0.13908357334580645 0.0007045974986788797 0.003888144603711916 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 39897 18800 HPFDLGLYNEA True PC9_epitope_Rep4 1274.59315184902 1274.5920499358601 80.399 2 0.13908172852231615 0.0007045974986788797 0.003888309637963116 ['ENSG00000106399|ENST00000223129|RPA3'] 141399 13575 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep1 1147.5107280451098 1147.5096299358602 57.343 2 0.1390581679373572 0.0007045974986788797 0.003890417931361459 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 7332 9607 ARPPGYEF True PC9_epitope_Rep4 935.45011644379 935.44900993586 44.577 2 0.13905110121142922 0.0007045974986788797 0.0038910505103582132 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 74727 19984 NHALPVYVF True PC9_epitope_Rep3 1058.5549158654999 1058.55380993586 82.113 2 0.13904832558346672 0.0007045974986788797 0.0038912989989605485 ['ENST00000481597.5_1_3:50356335-50357944:-|nuORF', 'ENSG00000068001|ENST00000357750|HYAL2'] 42640 3335 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 17.606 2 0.1390387755344834 0.0007045974986788797 0.0038921540889182054 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 28410 12803 FRYTAGTPY True PC9_epitope_Rep5 1074.5134449763398 1074.5123499358601 54.258 2 0.13903670955877398 0.0007045974986788797 0.0038923390962298287 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 6629 18732 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 76.841 2 0.13903429898072978 0.0007045974986788797 0.00389255497355465 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 43980 17234 IIEPSLRQLAQ True PC9_epitope_Rep5 1266.72958575218 1266.7284899358601 71.308 2 0.13903170910612717 0.0007045974986788797 0.003892786920848259 ['ENSG00000221983|ENST00000442744|UBA52'] 53389 19606 KQVEEIFNL True PC9_epitope_Rep3 1118.5971746003 1118.5960699358602 80.651 2 0.13902974139697682 0.0007045974986788797 0.0038929631566052554 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 68154 21894 LTDQTLIYL True PC9_epitope_Rep5 1078.5910265906998 1078.58992993586 89.253 2 0.13902518553248416 0.0007045974986788797 0.0038933712280440616 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 134812 21506 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep2 1230.58422733854 1230.5831299358601 88.191 2 0.13902401191883218 0.0007045974986788797 0.003893476356165119 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 128781 16971 VPYPPLLRA True PC9_epitope_Rep4 1024.6069514383598 1024.60584993586 73.269 2 0.13902329324679943 0.0007045974986788797 0.0038935407336279718 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 136895 11399 YAEVGRVL True PC9_epitope_Rep2 905.4970666362099 905.49596993586 49.168 2 0.13902145869638993 0.0007045974986788797 0.003893705074427346 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 137458 13937 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.47002496793 58.757 1 0.13901848600803074 0.0007045974986788797 0.0038939713853096067 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 113722 12181 TLYVGNLSR True PC9_epitope_Rep1 1021.5556441414899 1021.55454993586 51.712 2 0.1390184379087482 0.0007045974986788797 0.003893975694474124 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 28088 11086 FQVDTSKAGV True PC9_epitope_Rep5 1050.53457434374 1050.53346993586 47.63 2 0.13901717757617504 0.0007045974986788797 0.003894088608037121 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 17422 9640 EHDPVGQMV True PC9_epitope_Rep2 1010.44913046762 1010.44802993586 42.421 2 0.13901503981698254 0.0007045974986788797 0.003894280137921685 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 117982 9765 TYDKGYQF True PC9_epitope_Rep4 1020.45526139388 1020.45416993586 45.202 2 0.13900798966376346 0.0007045974986788797 0.003894911853781372 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 134501 9994 VYQHLFTRI True NCI_RA007_Epitope_Rep2 1175.6451278522297 1175.64349490379 43.496 3 0.13900543750769348 0.0007045974986788797 0.0038951405599948283 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 35912 5419 GTQTVFPSK True NCI_RA007_Epitope_Rep4 963.5025459394699 963.50144993586 27.419 2 0.13900191106110762 0.0007045974986788797 0.0038954565971329666 ['ENSG00000156463|ENST00000359120|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-3|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-2|SH3RF2', 'ENST00000511705.1_1_5:145435703-145442261:+|nuORF'] 45638 17482 IRDNFVIVY True PC9_epitope_Rep6 1137.61824439805 1137.6171499358602 79.871 2 0.13899053034699219 0.0007045974986788797 0.0038964767002682165 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 107742 5971 SVSNVVITK True NCI_RA007_Epitope_Rep2 945.54949613189 945.54838993586 27.835 2 0.13898796730200852 0.0007045974986788797 0.0038967064736867662 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 103353 9069 SPNSILKAA True PC9_epitope_Rep1 899.5076313199099 899.50652993586 39.735 2 0.13897495258921955 0.0007045974986788797 0.003897873431674704 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK'] 58002 8081 LEHGIVPVT True H1975_Epitope_Rep1 963.5389314481899 963.53782993586 36.027 2 0.13897194830720466 0.0007045974986788797 0.0038981428583461024 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'THOC5|p.S505I|1|0.59|ENSG00000100296|chr22:29517342-29517342|C/A|missense_variant'] 105075 14265 SRDQTVLGL True PC9_epitope_Rep5 987.5349086969098 987.53380993586 59.874 2 0.138970916242412 0.0007045974986788797 0.003898235419086769 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1'] 88280 14334 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.4842749679299 60.285 1 0.13896617366036337 0.0007045974986788797 0.003898660785585272 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 28887 10151 FTDEEVDEM[Oxidation]Y True H1975_Epitope_Rep2 1292.4754647352 1292.47436993586 44.045 2 0.13896527688461685 0.0007045974986788797 0.0038987412233853764 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 21874 13136 ESDFSNPLY True H1975_Epitope_Rep1 1070.4556553167 1070.45454993586 55.62 2 0.13896455487338488 0.0007045974986788797 0.003898805986584447 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 43942 12558 IIDLVLDR True NCI_RA007_Epitope_Rep2 955.57023157647 955.56912993586 53.463 2 0.13896067423870664 0.0007045974986788797 0.0038991540912724125 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 91652 14756 RISLPLPNF True NCI_RA007_Epitope_Rep3 1055.61276509479 1055.6116699358602 65.457 2 0.13895773470887474 0.0007045974986788797 0.003899417796492639 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 91622 17315 RIPEQIIVV True PC9_epitope_Rep4 1065.65462990677 1065.6535299358602 74.606 2 0.13895187998141845 0.0007045974986788797 0.003899943076714195 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 28261 18450 FRMDIEQSL True PC9_epitope_Rep4 1137.54884450889 1137.54774993586 79.038 2 0.13895097199887607 0.0007045974986788797 0.0039000245462651644 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 72292 11192 MIDPSGVSY True H1975_Epitope_Rep1 967.4320834211501 967.43098993586 48.019 2 0.13894842292331147 0.0007045974986788797 0.0039002532733727452 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 4114 19686 AHSNEILIF True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 80.546 2 0.13894343576117008 0.0007045974986788797 0.0039007008070298292 ['ENSG00000165516|ENST00000298307|KLHDC2', 'KLHDC2|p.R347T|1|0.07|ENSG00000165516|chr14:49782453-49782453|G/C|missense_variant', 'ENST00000554115.5_1_14:50249154-50249313:+|nuORF'] 76856 19685 NRDEMLVVL True PC9_epitope_Rep1 1087.5695799534699 1087.56848993586 80.542 2 0.1389431347551665 0.0007045974986788797 0.0039007278200743874 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 75547 19745 NLAEKLIGV True PC9_epitope_Rep1 955.5702315764698 955.56912993586 80.776 2 0.13894294023821216 0.0007045974986788797 0.0039007452766192893 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 76546 20207 NQITQLESL True PC9_epitope_Rep5 1044.54513902744 1044.5440499358601 82.772 2 0.13893964600884876 0.0007045974986788797 0.0039010409225621948 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 52939 8722 KPGM[Oxidation]FFNPEE True H1975_Epitope_Rep1 1210.53286047202 1210.5317699358602 38.477 2 0.13893596867854047 0.0007045974986788797 0.0039013709767310905 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153760401-153761015:-|nuORF'] 92182 8317 RLFVGSIPK True NCI_RA007_Epitope_Rep4 1015.6178504752298 1015.61674993586 38.806 2 0.13893541935430598 0.0007045974986788797 0.0039014202830127023 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 88198 19205 QRYNSFISL True PC9_epitope_Rep1 1126.5771078620598 1126.5760099358602 78.667 2 0.1389353969422692 0.0007045974986788797 0.0039014222946869128 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 141068 10564 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.5223749679301 45.656 1 0.13892400612602718 0.0007045974986788797 0.003902444851943454 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 75559 16450 NLAKCIVSV True PC9_epitope_Rep5 945.5317378927699 945.53064993586 68.273 2 0.13891776934199523 0.0007045974986788797 0.00390300484250278 ['ENSG00000140688|ENST00000327237|RUSF1'] 6632 19578 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 80.133 2 0.13891560736460193 0.0007045974986788797 0.003903198981463441 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 40294 9548 HQNQLLSSL True NCI_RA007_Epitope_Rep3 1038.5458077337798 1038.54470993586 44.643 2 0.1389060681934389 0.0007045974986788797 0.003904055684062165 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 140438 15993 YRGQFPEL True PC9_epitope_Rep1 1008.5028802926398 1008.50178993586 66.327 2 0.13890551894233086 0.0007045974986788797 0.0039041050173766667 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 99754 22628 SIINFFERL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 92.037 2 0.13889588289381466 0.0007045974986788797 0.0039049706203154633 ['ENSG00000116793|ENST00000369604|PHTF1', 'ENST00000481652.1_1_1:114242829-114248598:-|nuORF', 'nc|ENSG00000116793|Q9UMS5-2|PHTF1'] 97681 15705 SEHWLVLVP True NCI_RA007_Epitope_Rep4 1078.5811306133398 1078.58002993586 68.21 2 0.13889165220423272 0.0007045974986788797 0.0039053507217493588 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 28488 16210 FSDVMEDLY True H1975_Epitope_Rep2 1117.4637774722498 1117.46268993586 67.561 2 0.1388894076395328 0.0007045974986788797 0.0039055523969558858 ['ENSG00000167325|ENST00000300738|RRM1'] 31689 5468 GEFTSARAV True NCI_RA007_Epitope_Rep3 936.4664947839199 936.46538993586 28.516 2 0.13888546497428364 0.0007045974986788797 0.003905906672274242 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 125122 6997 VIFTGGVGK True NCI_RA007_Epitope_Rep3 876.5069030439198 876.50580993586 34.633 2 0.13888451616607667 0.0007045974986788797 0.0039059919339028385 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 26173 5497 FHDESTQV True PC9_epitope_Rep5 961.41412485789 961.41302993586 26.153 2 0.1388781570401331 0.0007045974986788797 0.00390656342408296 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 38346 7369 HEIEGTGLP True H1975_Epitope_Rep3 951.4661604307499 951.46506993586 33.322 2 0.13887345390744324 0.0007045974986788797 0.0039069861445787295 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 90915 11090 REYPNLVTI True NCI_RA007_Epitope_Rep3 1103.59750895347 1103.59640993586 50.722 2 0.13886860425450562 0.0007045974986788797 0.003907422081841634 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 71702 7482 MEEEPTHLP True H1975_Epitope_Rep2 1081.4750108622898 1081.47390993586 33.727 2 0.13886092399497613 0.0007045974986788797 0.003908112562022873 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 70567 15755 LWDTAGQERF True PC9_epitope_Rep1 1221.5778361380496 1221.5767299358602 65.425 2 0.13885316662222288 0.0007045974986788797 0.003908810097586459 ['nc|ENSG00000109113|Q9BZG1-2|RAB34', 'ENSG00000109113|ENST00000395245|RAB34', 'nc|ENSG00000175582|P20340-4|RAB6A', 'nc|ENSG00000154917|Q9NRW1-2|RAB6B', 'nc|ENSG00000175582|P20340-2|RAB6A', 'ENSG00000175582|ENST00000336083|RAB6A', 'ENSG00000154917|ENST00000285208|RAB6B', 'ENSG00000179331|ENST00000320578|RAB39A', 'ENSG00000041353|ENST00000262094|RAB27B', 'FAM168A-RAB6A|2|fusion', 'FAM168A-RAB6A|1|fusion', 'nc|ENSG00000109113|Q9BZG1-4|RAB34', 'nc|ENSG00000069974|P51159-2|RAB27A', 'ENSG00000069974|ENST00000336787|RAB27A', 'ENSG00000165105|ENST00000376447|RASEF', 'nc|ENSG00000147127|Q5JT25-2|RAB41', 'ENSG00000147127|ENST00000374473|RAB41', 'ENSG00000172007|ENST00000305626|RAB33B'] 76845 12693 NRDDSNLYI True PC9_epitope_Rep3 1108.51490152832 1108.51380993586 53.848 2 0.13884822808439232 0.0007045974986788797 0.003909254230427119 ['ENSG00000100714|ENST00000652337|MTHFD1', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 62138 5966 LLEGEETR True NCI_RA007_Epitope_Rep1 945.4767251144499 945.47562993586 27.254 2 0.13884224947975618 0.0007045974986788797 0.003909791965477897 ['ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 39066 7334 HHSNLIAGM True PC9_epitope_Rep4 978.47053461854 978.46942993586 35.54 2 0.13884160979421012 0.0007045974986788797 0.003909849505203956 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 128663 7651 VPVLAENYK True H1975_Epitope_Rep3 1031.56514619603 1031.56404993586 34.411 2 0.13883533267188114 0.0007045974986788797 0.003910414176956458 ['CON__Q29443', 'CON__Q0IIK2', 'nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 32765 8828 GHDASQITL True PC9_epitope_Rep4 940.46140940348 940.46030993586 41.489 2 0.13883494221762852 0.0007045974986788797 0.00391044930375844 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 140848 6935 YSDRETQLY True H1975_Epitope_Rep2 1173.53021723929 1173.52912993586 31.597 2 0.1388336724476784 0.0007045974986788797 0.0039105635394232445 ['MAP3K3|p.L439*|1|0.16|ENSG00000198909|chr17:63691202-63691202|C/-|frameshift_variant', 'MAP3K3|p.Y479Tfs*6|1|0.38|ENSG00000198909|chr17:63691821-63691821|C/-|frameshift_variant', 'MAP3K3|p.A510Pfs*25|1|0.22|ENSG00000198909|chr17:63692292-63692292|G/-|frameshift_variant', 'ENSG00000198909|ENST00000361733|MAP3K3', 'nc|ENSG00000198909|Q99759-2|MAP3K3', 'ENST00000577784.1_1_17:61765908-61766726:+|nuORF', 'ENST00000577839.1_1_17:61766126-61767181:+|nuORF'] 40950 13186 HTDAVWGLAY True H1975_Epitope_Rep3 1131.53490869691 1131.53380993586 55.971 2 0.13883353156216285 0.0007045974986788797 0.003910576214482335 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'nc|ENSG00000196792|Q13033-2|STRN3', 'ENSG00000196792|ENST00000357479|STRN3'] 82935 14278 PSDLTVGQFY True H1975_Epitope_Rep3 1125.5342399905699 1125.5331499358601 60.263 2 0.13883000189192551 0.0007045974986788797 0.003910893781900718 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 6634 18409 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 76.14 2 0.1388293063320491 0.0007045974986788797 0.003910956365023457 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 107231 20385 SVITQVFHV True PC9_epitope_Rep5 1028.5654805492 1028.5643899358602 83.446 2 0.13882328288367657 0.0007045974986788797 0.003911498367336238 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 54413 13920 KYFLKPEVL True PC9_epitope_Rep4 1135.6641319613097 1135.66249490379 61.445 3 0.13882100559724234 0.0007045974986788797 0.0039117033016444714 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 27874 14716 FQDPYTRSL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 61.427 2 0.13882081660305554 0.0007045974986788797 0.003911720309817196 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 141467 15586 YTGTPDWLY True H1975_Epitope_Rep3 1114.4971262058598 1114.49657496793 65.368 1 0.13881722781465605 0.0007045974986788797 0.0039120432899084675 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 141291 8655 YTDMESEDY True H1975_Epitope_Rep3 1151.39648575807 1151.39538993586 38.287 2 0.13881164621847275 0.0007045974986788797 0.003912545669142549 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 60543 13518 LHDPVSISV True PC9_epitope_Rep6 965.5181960036101 965.51708993586 63.721 2 0.13880810486896797 0.0007045974986788797 0.003912864446295632 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 38603 14356 HEYPWILSA True NCI_RA007_Epitope_Rep5 1114.54474510462 1114.54364993586 61.905 2 0.1388054285275199 0.0007045974986788797 0.0039131053761820075 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 6353 5483 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 26.166 2 0.13879660208013386 0.0007045974986788797 0.003913900055658054 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 75105 12789 NHVTPPNVSL True PC9_epitope_Rep3 1076.56145779792 1076.56036993586 54.214 2 0.138789824452681 0.0007045974986788797 0.003914510380355971 ['ENSG00000171223|ENST00000302754|JUNB'] 43932 5852 IIDEVVNK True H1975_Epitope_Rep3 928.52294703088 928.52184993586 27.523 2 0.1387800185586099 0.0007045974986788797 0.003915393566986312 ['ENSG00000112208|ENST00000370693|BAG2', 'BAG2|p.F124C|1|0.1|ENSG00000112208|chr6:57183925-57183925|T/G|missense_variant', 'nc|ENSG00000112208|O95816-2|BAG2'] 92780 17119 RPADVIFATV True PC9_epitope_Rep6 1087.60259433391 1087.6014899358602 78.427 2 0.1387791066737814 0.0007045974986788797 0.003915475707666945 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 90494 6412 RELEQRVSL True NCI_RA007_Epitope_Rep4 1128.62512068364 1128.62402993586 31.264 2 0.1387690461006355 0.0007045974986788797 0.003916382056353348 ['ENSG00000160551|ENST00000261716|TAOK1', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 73035 15851 M[Oxidation]RDPIRILV True PC9_epitope_Rep3 1127.64849936095 1127.64685490379 66.121 3 0.13876877598402632 0.0007045974986788797 0.003916406393798115 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 27132 22833 FLITILDHL True PC9_epitope_Rep5 1083.63283183303 1083.6317299358602 92.823 2 0.13876462732423137 0.0007045974986788797 0.003916780205911922 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1', 'ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 47771 23081 IYEPNFIFF True PC9_epitope_Rep4 1188.5855472874398 1188.5844499358602 97.003 2 0.13876330936067746 0.0007045974986788797 0.003916898967498602 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 107527 17562 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 72.345 2 0.13876060470542348 0.0007045974986788797 0.00391714269492665 ['ENSG00000073756|ENST00000367468|PTGS2'] 90788 4087 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 21.997 2 0.1387605796396904 0.0007045974986788797 0.003917144953771505 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 53777 9571 KTAAEDAIRNL True PC9_epitope_Rep4 1200.6462500510397 1200.64459490379 44.434 3 0.1387603809503473 0.0007045974986788797 0.003917162859074458 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'RBM4-DPP3|1|fusion', 'ENSG00000173914|ENST00000310046|RBM4B'] 108431 20740 SYLPFTEAF True PC9_epitope_Rep6 1073.5069626135698 1073.5058699358601 92.535 2 0.13875289201458532 0.0007045974986788797 0.003917837799178541 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 2930 7373 AEYVVQQEGA True H1975_Epitope_Rep3 1092.50875351872 1092.5076499358602 33.338 2 0.13872776313748306 0.0007045974986788797 0.003920103380038067 ['ENSG00000197601|ENST00000354817|FAR1', 'ENST00000524933.1_1_11:13716477-13732426:+|nuORF'] 142831 9960 YYSPTKNEI True PC9_epitope_Rep5 1113.53423999057 1113.5331499358601 43.286 2 0.1387251190924421 0.0007045974986788797 0.003920341838484737 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 107096 12581 SVHKGFAFV True PC9_epitope_Rep3 990.5287011176598 990.52760993586 53.416 2 0.1387245217871812 0.0007045974986788797 0.003920395709633305 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 117668 20468 TVTSDLLQV True PC9_epitope_Rep5 974.5284263341399 974.5273299358599 83.767 2 0.1387237843072459 0.0007045974986788797 0.003920462224190893 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 110305 7416 TESSWHEIA True H1975_Epitope_Rep2 1058.4668887067398 1058.4657899358601 33.468 2 0.13872359552117025 0.0007045974986788797 0.003920479251304685 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 107202 14825 SVIPQIQKV True PC9_epitope_Rep3 1010.6124307416198 1010.61132993586 62.16 2 0.1387199929387582 0.0007045974986788797 0.0039208041917405175 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 3977 12662 AHDTTLVAL True PC9_epitope_Rep4 939.50254593947 939.50144993586 56.547 2 0.13871939604956887 0.0007045974986788797 0.003920858031649906 ['ENSG00000134575|ENST00000672073|ACP2'] 105661 14565 SSEELPLYY True H1975_Epitope_Rep3 1099.5073565363898 1099.50677496793 61.392 1 0.13871504733875525 0.0007045974986788797 0.00392125031113757 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 23451 13617 EVTINQSLL True H1975_Epitope_Rep3 1015.55497543515 1015.55386993586 57.665 2 0.13871418517330988 0.0007045974986788797 0.003921328088186292 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT3|p.V305*|1|0.36|ENSG00000186442|chr12:52793177-52793177|C/-|frameshift_variant', 'KRT6A|p.V140I|1|0.25|ENSG00000205420|chr12:52492771-52492771|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'CON__P50446', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 64926 17902 LQEEPVEGF True PC9_epitope_Rep1 1046.49204082542 1046.49094993586 73.652 2 0.13871336799525932 0.0007045974986788797 0.003921401808274602 ['ENSG00000107341|ENST00000263228|UBE2R2', 'ENST00000586788.1_1_19:531880-536341:+|nuORF', 'ENSG00000099804|ENST00000215574|CDC34'] 133832 18752 VYGFLRNGF True PC9_epitope_Rep4 1071.5501648382299 1071.5490699358602 80.212 2 0.13871218678471608 0.0007045974986788797 0.003921508371253819 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 57756 7860 LEEPKVISA True H1975_Epitope_Rep1 984.54916177872 984.54806993586 35.185 2 0.13870531747145148 0.0007045974986788797 0.003922128143584904 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant'] 87717 8462 QRAITGASL True PC9_epitope_Rep3 915.5137793295099 915.51268993586 37.511 2 0.13870512651364905 0.0007045974986788797 0.003922145373819598 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 142626 14960 YYNKVSTVF True PC9_epitope_Rep3 1119.5600608155898 1119.5589699358602 62.674 2 0.13870180095405507 0.0007045974986788797 0.003922445453034201 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 24351 15505 EYYDKHFTEF True PC9_epitope_Rep1 1377.5877321154096 1377.5866299358602 64.462 2 0.13869982503081058 0.0007045974986788797 0.003922623759656721 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 9475 6700 AVVIVDDR True PC9_epitope_Rep6 885.4919812557699 885.49088993586 34.531 2 0.13869504640216096 0.0007045974986788797 0.003923055014611175 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 71699 10269 MEEDSIRLPA True H1975_Epitope_Rep2 1159.55432381215 1159.5532299358601 44.507 2 0.13868818496098897 0.0007045974986788797 0.003923674318399578 ['ENSG00000139083|ENST00000396373|ETV6', 'ENST00000541426.1_1_12:11803061-11978588:+|nuORF', 'ENST00000544715.1_1_12:11869674-11905524:+|nuORF'] 90063 7774 REAEEPVFAA True H1975_Epitope_Rep1 1117.54038800017 1117.53928993586 34.857 2 0.1386873170870417 0.0007045974986788797 0.003923752658347094 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 28455 14030 FSDLYNEVY True H1975_Epitope_Rep1 1148.50260550912 1148.50207496793 59.13 1 0.13868433156553292 0.0007045974986788797 0.0039240221627656075 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 46694 5599 ITDTTRDVY True H1975_Epitope_Rep3 1082.52440358286 1082.5233099358602 26.576 2 0.13868049326477092 0.0007045974986788797 0.003924368674894971 ['ENSG00000161904|ENST00000293760|LEMD2'] 38950 10682 HHINDTDTIL True PC9_epitope_Rep1 1177.57275075761 1177.57164993586 45.979 2 0.13867383676418732 0.0007045974986788797 0.003924969678843686 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 3980 11860 AHDTTLVAL True PC9_epitope_Rep6 939.50254593947 939.50144993586 56.83 2 0.13867312085112232 0.0007045974986788797 0.003925034322826414 ['ENSG00000134575|ENST00000672073|ACP2'] 39148 9492 HHYSGNNIEL True PC9_epitope_Rep3 1182.5417849825 1182.54013490379 41.461 3 0.13867059151359173 0.0007045974986788797 0.003925262719964629 ['ENSG00000156482|ENST00000287038|RPL30'] 133360 20861 VVVGDLVEV True PC9_epitope_Rep5 927.5276980581499 927.52660993586 85.294 2 0.13867052886526862 0.0007045974986788797 0.003925268377224662 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 84345 15049 PYVNNVPHL True PC9_epitope_Rep3 1051.54507945779 1051.54398993586 63.016 2 0.1386700268175218 0.0007045974986788797 0.003925313713361051 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 99038 14991 SHFEGLITT True PC9_epitope_Rep1 1003.49746055903 1003.49636993586 62.482 2 0.13866277833456236 0.0007045974986788797 0.003925968326840074 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 88158 8726 QRVDSPVTV True PC9_epitope_Rep2 999.5349086969098 999.53380993586 38.926 2 0.1386581555060143 0.0007045974986788797 0.003926385872839681 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 88840 7237 QVASTLKQV True PC9_epitope_Rep3 972.5603951687598 972.55928993586 32.848 2 0.13865809255083247 0.0007045974986788797 0.003926391559420298 ['ENSG00000166295|ENST00000299381|ANAPC16'] 106933 10117 SVDSHFQEV True PC9_epitope_Rep5 1046.4668887067398 1046.4657899358601 43.899 2 0.13865787038295244 0.0007045974986788797 0.003926411627342054 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 63558 15906 LMDHTIPEV True PC9_epitope_Rep1 1053.51648175145 1053.5153899358602 65.993 2 0.13865715217452884 0.0007045974986788797 0.003926476502178211 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 142687 12882 YYPSTPGRYSI True PC9_epitope_Rep6 1302.6244519773 1302.62334993586 61.074 2 0.1386536633304344 0.0007045974986788797 0.003926791660044617 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 111162 14313 THGIFTIST True PC9_epitope_Rep4 975.5025459394701 975.50144993586 62.958 2 0.13865235352135352 0.0007045974986788797 0.003926909985537344 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 21256 20929 ERDRLILFL True PC9_epitope_Rep1 1173.6869926642098 1173.6858899358601 85.324 2 0.13865174346802153 0.0007045974986788797 0.003926965097721673 ['ENSG00000138246|ENST00000260818|DNAJC13'] 104995 16175 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.60010993586 67.356 2 0.1386509756510852 0.0007045974986788797 0.003927034463349844 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 45305 19796 IPYHIVNIV True PC9_epitope_Rep3 1066.6175161220601 1066.61640993586 81.378 2 0.13864500561186036 0.0007045974986788797 0.003927573846218111 ['ENSG00000031698|ENST00000234677|SARS1'] 17896 12751 EHYYNAISV True PC9_epitope_Rep4 1094.50327421546 1094.5021699358601 56.907 2 0.13863765465116398 0.0007045974986788797 0.003928238093756866 ['ENSG00000198730|ENST00000361367|CTR9'] 76500 18555 NQIGAKFWEV True PC9_epitope_Rep4 1190.60840799034 1190.60730993586 79.447 2 0.13863646746128575 0.0007045974986788797 0.003928345381045443 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 809 9292 AAYYHPSYL True H1975_Epitope_Rep1 1083.5025459394699 1083.5014499358601 40.652 2 0.13863361542325825 0.0007045974986788797 0.003928603133835691 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 133126 21043 VVQPLLVSV True PC9_epitope_Rep3 952.5957180483199 952.59462993586 86.221 2 0.1386316807829858 0.0007045974986788797 0.003928777986382922 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 23907 20937 EYLADLYHF True PC9_epitope_Rep2 1169.5393253710101 1169.53822993586 85.982 2 0.13863109898168338 0.0007045974986788797 0.003928830571019328 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 17553 16747 EHGNFLITV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 76.909 2 0.13863006775967684 0.0007045974986788797 0.003928923777119476 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 35355 6393 GRYAGEESL True PC9_epitope_Rep2 980.4563240230399 980.45522993586 29.997 2 0.13862232602805757 0.0007045974986788797 0.003929623576686667 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 37598 10957 GVVPTIQKV True PC9_epitope_Rep6 939.5753169569098 939.57420993586 53.029 2 0.1386221204942354 0.0007045974986788797 0.003929642157219521 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 39853 7592 HPADSVVSV True PC9_epitope_Rep2 909.4555957470501 909.45448993586 34.573 2 0.13862146705054013 0.0007045974986788797 0.003929701229982813 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 95352 12150 RVVDELDNQM True PC9_epitope_Rep2 1217.57103650545 1217.56992993586 52.045 2 0.1386081613582504 0.0007045974986788797 0.003930904285407927 ['nc|ENSG00000085231|Q9Y3D8-2|AK6', 'ENSG00000085231|ENST00000380822|AK6'] 137442 10720 YEDGNVQLV True H1975_Epitope_Rep1 1035.4872897981497 1035.48677496793 46.196 1 0.13860787195540705 0.0007045974986788797 0.003930930456280052 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 49179 5668 KEMEKSFEV True H1975_Epitope_Rep2 1125.5376111188498 1125.53596490379 26.799 3 0.13860174495453384 0.0007045974986788797 0.003931484565122226 ['ENSG00000091527|ENST00000264993|CDV3'] 76459 15687 NQFPGFKEV True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 65.351 2 0.13859788765665487 0.0007045974986788797 0.003931833448035121 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 45245 19831 IPTPIVGV True PC9_epitope_Rep3 794.49019035062 794.48908993586 81.515 2 0.13859547473646325 0.0007045974986788797 0.003932051706196199 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 4146 8867 AHTAEVNCL True PC9_epitope_Rep3 956.43856578392 956.43746993586 39.058 2 0.1385862535219525 0.0007045974986788797 0.003932885911991997 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 77926 17017 NVKEMWTEV True PC9_epitope_Rep1 1134.53794547202 1134.5368499358601 70.279 2 0.13858216812908 0.0007045974986788797 0.003933255556892257 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 10943 14209 DAFVAIVQSVK True NCI_RA007_Epitope_Rep2 1175.6550238295902 1175.65392993586 59.932 2 0.13857739817659936 0.0007045974986788797 0.003933687184030843 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 105045 14119 SRDPIVMGV True PC9_epitope_Rep5 972.50625142092 972.50514993586 59.319 2 0.13857675822284354 0.0007045974986788797 0.003933745096227714 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.T1113M|1|0.07|ENSG00000158417|chr2:99396843-99396843|C/T|missense_variant'] 111043 17692 THDGGFLSL True PC9_epitope_Rep2 945.45559574705 945.45448993586 73.333 2 0.13857665208556655 0.0007045974986788797 0.003933754701132841 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 4329 5351 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 28.055 2 0.13857035504274687 0.0007045974986788797 0.003934324594306262 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 8177 9589 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51166993586 41.859 2 0.13856783102440282 0.0007045974986788797 0.003934553045243152 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 128782 17057 VPYPPLLRA True PC9_epitope_Rep4 1024.6069514383598 1024.60584993586 73.605 2 0.13856431258027005 0.0007045974986788797 0.0039348715243757515 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 125065 11671 VIDSAELQAY True H1975_Epitope_Rep3 1107.54480467427 1107.54427496793 50.028 1 0.13855819098062092 0.0007045974986788797 0.003935425694265109 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 28867 13984 FTDEEVDELY True H1975_Epitope_Rep2 1258.52412879934 1258.5230299358602 58.937 2 0.1385532612918235 0.0007045974986788797 0.0039358720202415255 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 95942 10714 RYLEKPMEI True PC9_epitope_Rep4 1177.6165301458898 1177.61488490379 48.965 3 0.13855193435860716 0.0007045974986788797 0.003935992167169219 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 37522 17774 GVVEKLSVL True PC9_epitope_Rep5 942.5749826037398 942.57388993586 73.386 2 0.13855018499821223 0.0007045974986788797 0.0039361505682385676 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 53342 8683 KQNVVPTVL True NCI_RA007_Epitope_Rep3 996.5967806774798 996.59568993586 41.235 2 0.13854923989279053 0.0007045974986788797 0.0039362361482618265 ['ENSG00000142173|ENST00000300527|COL6A2'] 77062 16577 NRLDAELQL True PC9_epitope_Rep2 1070.57202248162 1070.57092993586 69.001 2 0.1385491202790014 0.0007045974986788797 0.003936246979513815 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'ENST00000467553.2_1_6:31112829-31113051:-|nuORF'] 26889 16027 FLDGNELTL True NCI_RA007_Epitope_Rep4 1020.51277627 1020.51227496793 69.517 1 0.13854691192124446 0.0007045974986788797 0.003936446955734499 ['ENSG00000213719|ENST00000375784|CLIC1'] 65370 14154 LRDSFQQVV True PC9_epitope_Rep3 1090.57710786206 1090.5760099358602 59.526 2 0.13854335226284079 0.0007045974986788797 0.003936769319171058 ['ARNT|p.Q581Afs*21|1|0.22|ENSG00000143437|chr1:150816846-150816850|GTTGG/-|frameshift_variant', 'ARNT|p.P578Lfs*28|1|0.36|ENSG00000143437|chr1:150816857-150816857|G/-|frameshift_variant', 'nc|ENSG00000143437|P27540-2|ARNT', 'nc|ENSG00000143437|P27540-3|ARNT', 'nc|ENSG00000143437|P27540-4|ARNT', 'ENSG00000143437|ENST00000358595|ARNT'] 131553 18021 VTLDNGIIRV True PC9_epitope_Rep4 1098.6397081186199 1098.6386099358601 77.38 2 0.13853470407675317 0.0007045974986788797 0.003937552609668282 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75651254-75651557:-|nuORF', 'ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 138278 13105 YHAQMPDSL True PC9_epitope_Rep1 1060.46478053176 1060.4636899358602 55.275 2 0.1385331646740827 0.0007045974986788797 0.003937692053867497 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 95374 4419 RVYGGLTTK True NCI_RA007_Epitope_Rep2 993.5607295219299 993.55962993586 21.822 2 0.13853304084376156 0.0007045974986788797 0.003937703271041122 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 13295 8282 DLTGVQNLR True H1975_Epitope_Rep1 1014.54580773378 1014.5447099358599 36.79 2 0.13853243114166763 0.0007045974986788797 0.003937758501386296 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 90687 6453 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 29.739 2 0.13852873142029842 0.0007045974986788797 0.00393809366001322 ['ENSG00000129250|ENST00000320785|KIF1C'] 134173 18843 VYLPNINKI True PC9_epitope_Rep1 1072.62808080576 1072.6269899358601 77.265 2 0.13852685780398943 0.0007045974986788797 0.003938263402127357 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 17250 8084 EHAGGEVEL True PC9_epitope_Rep1 939.42977492203 939.42866993586 35.919 2 0.13851758699658515 0.0007045974986788797 0.003939103406653751 ['ENSG00000218891|ENST00000325421|ZNF579'] 90299 4318 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6032899358602 21.726 2 0.1385146110519104 0.0007045974986788797 0.00393937308711909 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 105097 6127 SREESAGPAL True PC9_epitope_Rep1 1015.4934378077497 1015.49234993586 28.383 2 0.13850967844643133 0.0007045974986788797 0.003939820120681578 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 76863 15085 NRDGNIVFV True PC9_epitope_Rep3 1032.5352430500798 1032.5341499358601 63.162 2 0.1385067333017592 0.0007045974986788797 0.003940087058030779 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 1482 7273 AEEIPSRIQA True H1975_Epitope_Rep3 1112.58258716532 1112.5814899358602 32.95 2 0.1385061964140537 0.0007045974986788797 0.003940135721536255 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 26237 6899 FHDSAVTSV True PC9_epitope_Rep6 961.45051036661 961.44940993586 35.456 2 0.13850469461497786 0.0007045974986788797 0.0039402718477755715 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 92831 8830 RPASYQSVSV True PC9_epitope_Rep5 1092.55637241748 1092.55526993586 38.91 2 0.1384992051567038 0.0007045974986788797 0.003940769463481364 ['ENSG00000167720|ENST00000344595|SRR'] 35419 17969 GSDVVDWLY True H1975_Epitope_Rep2 1052.48147614172 1052.4803699358602 74.442 2 0.13847845521929225 0.0007045974986788797 0.00394265099351978 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 114936 9054 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 44.883 2 0.1384722256527999 0.0007045974986788797 0.003943216041876809 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 90545 8614 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64402993586 39.809 2 0.13847096624018745 0.0007045974986788797 0.003943330285736113 ['ENSG00000127540|ENST00000591899|UQCR11'] 61053 20655 LIGEFLEKV True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 84.271 2 0.13847094725389764 0.0007045974986788797 0.0039433320080458495 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 76880 10850 NRDLATPVM True PC9_epitope_Rep2 1015.51206507735 1015.51096993586 47.051 2 0.1384706415194874 0.0007045974986788797 0.003943359742337408 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 49525 11346 KFIDTTSKF True PC9_epitope_Rep1 1085.57571087973 1085.57460993586 48.521 2 0.13847011645289656 0.0007045974986788797 0.00394340737350748 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 45855 8514 ISDPGVQGY True H1975_Epitope_Rep3 934.43961132974 934.4390649679301 37.735 1 0.13846895406302248 0.0007045974986788797 0.0039435128211871865 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 6916 13733 AQIGSYVHV True PC9_epitope_Rep5 972.50288029264 972.50178993586 57.847 2 0.13846830436328358 0.0007045974986788797 0.00394357176074371 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 117870 7210 TVYSGEEKL True PC9_epitope_Rep6 1024.5076908895599 1024.5065899358601 36.826 2 0.13846286859817403 0.0007045974986788797 0.003944064917456743 ['ENSG00000166224|ENST00000373202|SGPL1'] 133340 18919 VVVDPIQSV True PC9_epitope_Rep2 954.53859709502 954.53750993586 78.136 2 0.1384600272138869 0.0007045974986788797 0.003944322724736493 ['ENSG00000115233|ENST00000409682|PSMD14'] 139827 6532 YPM[Oxidation]AVGLNK True NCI_RA007_Epitope_Rep5 1007.5110028286299 1007.50990993586 31.789 2 0.13845989166453954 0.0007045974986788797 0.003944335023950407 ['ENSG00000130255|ENST00000347512|RPL36'] 25382 11874 FEAPSPLGA True H1975_Epitope_Rep3 887.4388830537498 887.43833496793 50.823 1 0.13845560737209306 0.0007045974986788797 0.003944723783339357 ['ENST00000477110.6_1_X:295104-295341:-|nuORF', 'nc|ENSG00000292327|Q9Y5P8-2|PPP2R3B', 'ENSG00000167393|ENST00000390665|PPP2R3B'] 49294 2823 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 14.931 2 0.13844931808018085 0.0007045974986788797 0.003945294546358633 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 31441 8446 GEALASISHVA True H1975_Epitope_Rep1 1053.54547338061 1053.54436993586 37.416 2 0.13844599841536942 0.0007045974986788797 0.0039455958440675004 ['ENSG00000076242|ENST00000231790|MLH1', 'ENST00000539477.5_1_3:37035370-37053334:+|nuORF', 'ENST00000466900.5_1_3:37035370-37047454:+|nuORF'] 2052 7633 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 34.312 2 0.13844579101594046 0.0007045974986788797 0.003945614668703761 ['ENSG00000173801|ENST00000393931|JUP'] 128740 5857 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 27.927 2 0.13844455950206097 0.0007045974986788797 0.0039457264490534395 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 141682 11353 YTTDRVMTV True PC9_epitope_Rep3 1084.5222954078802 1084.52118993586 48.673 2 0.13844060900079214 0.0007045974986788797 0.003946085043852131 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 40850 10064 HSDVTEAMLY True H1975_Epitope_Rep2 1164.512124647 1164.51102993586 43.703 2 0.13843672795380874 0.0007045974986788797 0.003946437365566639 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 115934 4144 TSGPTTPLK True NCI_RA007_Epitope_Rep4 900.4916469026 900.49054993586 22.231 2 0.1384320403661284 0.0007045974986788797 0.003946862946624564 ['ENSG00000188112|ENST00000341865|C6orf132'] 49018 11761 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 52.211 2 0.13843200305932063 0.0007045974986788797 0.0039468663338518666 ['ENSG00000197747|ENST00000368811|S100A10'] 65329 9525 LRDENVNVV True PC9_epitope_Rep1 1056.5563724174801 1056.55526993586 41.495 2 0.13843143526110854 0.0007045974986788797 0.003946917886771362 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 109161 19834 TAM[Oxidation]DVVYAL True PC9_epitope_Rep1 997.4790339940099 997.47792993586 81.107 2 0.13843130443867613 0.0007045974986788797 0.003946929764815067 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 35354 7646 GRYAGEESL True PC9_epitope_Rep1 980.4563240230399 980.45522993586 34.233 2 0.13842007441328513 0.0007045974986788797 0.003947949528686885 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 77590 17360 NTDSLDWALY True H1975_Epitope_Rep1 1196.5349682665599 1196.5338699358601 72.241 2 0.13840726690310381 0.0007045974986788797 0.003949112857451198 ['ENSG00000108561|ENST00000225698|C1QBP'] 21882 13147 ESDFSNPLY True H1975_Epitope_Rep3 1070.4556553167 1070.45507496793 55.818 1 0.13840404100045287 0.0007045974986788797 0.003949405925384788 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 5294 7488 ALQEM[Oxidation]VHQV True PC9_epitope_Rep5 1069.52263014149 1069.5215299358601 33.753 2 0.13840367949435078 0.0007045974986788797 0.0039494387689593315 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 30160 20635 FYPPKVELF True PC9_epitope_Rep3 1138.60628273202 1138.6051899358602 84.643 2 0.13839956374574505 0.0007045974986788797 0.003949812712267803 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 1351 5860 AEEAARLSVA True H1975_Epitope_Rep2 1015.5298233164699 1015.52872993586 27.526 2 0.13839864081742592 0.0007045974986788797 0.003949896571294153 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 118654 13100 TYSPALNKM[Oxidation]F True PC9_epitope_Rep5 1186.5692459807399 1186.5681499358602 55.393 2 0.13839803334898443 0.0007045974986788797 0.003949951767996557 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 18780 9175 ELDDTLKY True H1975_Epitope_Rep1 995.4811417885501 995.48004993586 40.197 2 0.13839705512490352 0.0007045974986788797 0.00395004065445506 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 35913 5246 GTQTVFPSK True NCI_RA007_Epitope_Rep5 963.5025459394699 963.50144993586 26.876 2 0.13839107943689902 0.0007045974986788797 0.003950583679120422 ['ENSG00000156463|ENST00000359120|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-3|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-2|SH3RF2', 'ENST00000511705.1_1_5:145435703-145442261:+|nuORF'] 14929 17192 DYEAGHLSF True PC9_epitope_Rep5 1037.4454249861699 1037.4443299358602 71.149 2 0.13839052800244317 0.0007045974986788797 0.003950633792976189 ['nc|ENSG00000154370|Q96F44-3|TRIM11', 'ENSG00000154370|ENST00000284551|TRIM11'] 49252 6418 KEQEPMPTV True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 29.609 2 0.13838825736578303 0.0007045974986788797 0.003950840152976882 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2'] 76953 15017 NRDTQELLL True PC9_epitope_Rep5 1100.58258716532 1100.5814899358602 62.765 2 0.13838500473734963 0.0007045974986788797 0.003951135776945501 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 54833 16225 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 71.51 2 0.1383830974444662 0.0007045974986788797 0.003951309136624283 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 141371 7217 YTEEDAASY True H1975_Epitope_Rep2 1047.40328539067 1047.4027749679299 32.694 1 0.13838031645285565 0.0007045974986788797 0.003951561922944677 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 115486 8032 TRNPVSEEL True PC9_epitope_Rep6 1043.52473793603 1043.52364993586 40.378 2 0.13837547174535586 0.0007045974986788797 0.003952002334962448 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 89690 11844 RAAEEFVNV True PC9_epitope_Rep2 1033.5192586327698 1033.5181699358602 50.886 2 0.1383695504119724 0.0007045974986788797 0.003952540684510157 ['ENSG00000132661|ENST00000254998|NXT1'] 115334 13455 TRIGLETSL True PC9_epitope_Rep4 988.55530978832 988.55420993586 59.652 2 0.13836876187923106 0.0007045974986788797 0.003952612380976329 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 2575 8432 [Acetylation]-AEQVALSR True H1975_Epitope_Rep3 914.4821451643598 914.48104993586 37.417 2 0.13834431264683103 0.0007045974986788797 0.003954836039296295 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 115006 9242 TRAGPGTLSV True PC9_epitope_Rep3 957.52434401321 957.52324993586 40.492 2 0.13833923918616248 0.0007045974986788797 0.0039552976258077095 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 73323 9017 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 39.681 2 0.1383333879940786 0.0007045974986788797 0.003955830037014863 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 21684 4636 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 24.351 2 0.1383218151885433 0.0007045974986788797 0.0039568832777556445 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 108605 20295 SYPDNFLHI True PC9_epitope_Rep3 1104.52400966004 1104.52290993586 83.315 2 0.13831821843792888 0.0007045974986788797 0.003957210674481095 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 44359 7222 ILEGELER True H1975_Epitope_Rep1 957.5131106231698 957.51200993586 32.79 2 0.138315155883147 0.0007045974986788797 0.003957489466797391 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 104934 9390 SRDDTTLNAL True PC9_epitope_Rep6 1104.54111627616 1104.54000993586 46.318 2 0.13831408067798368 0.0007045974986788797 0.00395758735012746 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 9036 11247 AVHEDIVAV True PC9_epitope_Rep2 951.5025459394699 951.50144993586 48.588 2 0.1383120226031545 0.0007045974986788797 0.003957774717535689 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 60973 13356 LIDVGTGYY True H1975_Epitope_Rep1 999.49131254943 999.4907749679301 56.483 1 0.13830398435925986 0.0007045974986788797 0.003958506604467412 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 109742 5259 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 25.297 2 0.13830291065621114 0.0007045974986788797 0.0039586043759173494 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 58 12670 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44850496793 53.789 1 0.13829789730239012 0.0007045974986788797 0.003959060923791855 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 71850 15152 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51432993586 63.437 2 0.138296464984475 0.0007045974986788797 0.0039591913693409015 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 88734 14288 QTISALIKA True PC9_epitope_Rep5 943.57023157647 943.56912993586 59.963 2 0.13829451379813332 0.0007045974986788797 0.0039593690766615555 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 53174 7532 KQDGTIQNL True PC9_epitope_Rep1 1015.52982331647 1015.52872993586 33.789 2 0.1382909321614919 0.0007045974986788797 0.003959695300320555 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 2055 7546 AELATRALP True H1975_Epitope_Rep3 940.5341804209199 940.53308993586 34.007 2 0.13829090956823933 0.0007045974986788797 0.003959697358250131 ['ENSG00000173801|ENST00000393931|JUP'] 22495 11985 ETFSYPESY True H1975_Epitope_Rep2 1121.4553209635299 1121.45477496793 51.181 1 0.1382874155370794 0.0007045974986788797 0.003960015628404393 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 4149 8547 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 37.82 2 0.13828649779256574 0.0007045974986788797 0.003960099229650875 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 78254 12081 NYIDKVRFL True NCI_RA007_Epitope_Rep2 1166.64479349906 1166.64368993586 51.586 2 0.1382846681090077 0.0007045974986788797 0.003960265908512821 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 30175 11858 FYQEHPDL True PC9_epitope_Rep5 1047.4661604307498 1047.4650699358601 50.61 2 0.13828104727351748 0.0007045974986788797 0.003960595776587624 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 134575 18534 VYSEVAAYEF True PC9_epitope_Rep6 1176.5339056373998 1176.53280993586 83.934 2 0.13828081986766846 0.0007045974986788797 0.00396061649479384 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 139096 15951 YLDIGQVYY True H1975_Epitope_Rep3 1132.54407639828 1132.54357496793 66.81 1 0.13827573944606908 0.0007045974986788797 0.003961079383431178 ['ENSG00000006555|ENST00000371276|TTC22'] 34372 18095 GPFSQFIKA True PC9_epitope_Rep4 993.5283667644898 993.52726993586 77.67 2 0.13827281701444896 0.0007045974986788797 0.003961345677010966 ['ENSG00000075420|ENST00000415807|FNDC3B'] 107099 12106 SVHKGFAFV True PC9_epitope_Rep5 990.5287011176598 990.52760993586 51.557 2 0.1382708706853603 0.0007045974986788797 0.003961523037421522 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 142658 18257 YYPEHFTLL True PC9_epitope_Rep6 1181.57571087973 1181.57460993586 82.867 2 0.13826735616274619 0.0007045974986788797 0.0039618433203244844 ['ENSG00000100065|ENST00000251973|CARD10'] 68372 5959 LTEQQKALY True H1975_Epitope_Rep2 1092.5815245361598 1092.5804299358601 27.903 2 0.13826735017862518 0.0007045974986788797 0.0039618438656868794 ['ENSG00000143157|ENST00000367876|POGK'] 27892 10376 FQDRPVSSL True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 45.235 2 0.13825296026879622 0.0007045974986788797 0.003963155503952148 ['ENSG00000130147|ENST00000392011|SH3BP4'] 48968 5628 KEERPPELP True H1975_Epitope_Rep3 1093.5767735088898 1093.57566993586 26.685 2 0.1382528238001525 0.0007045974986788797 0.003963167945107295 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 66127 7146 LSELKPM[Oxidation]SY True H1975_Epitope_Rep3 1082.53179784286 1082.5307099358602 32.459 2 0.1382458304195616 0.0007045974986788797 0.0039638055479562185 ['TMTC3|p.K629Qfs*3|1|0.1|ENSG00000139324|chr12:88192781-88192782|-/C|frameshift_variant', 'ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 96311 14071 RYSEYAEEF True PC9_epitope_Rep5 1192.5036681382796 1192.50256993586 59.138 2 0.1382456625241458 0.0007045974986788797 0.003963820856621665 ['ENSG00000139505|ENST00000381801|MTMR6'] 758 9917 AAVPRAAFL True H1975_Epitope_Rep1 914.5337864980999 914.53268993586 43.081 2 0.13824290514349086 0.0007045974986788797 0.0039640722823300265 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 47201 4909 IVAGTLTNK True NCI_RA007_Epitope_Rep4 915.53893144819 915.53782993586 25.34 2 0.13823402222651449 0.0007045974986788797 0.003964882358986085 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 7282 19569 ARDSLPVLL True PC9_epitope_Rep1 982.58113061334 982.58002993586 80.097 2 0.1382315056481959 0.0007045974986788797 0.0039651118878615685 ['ENST00000494870.5_1_X:2838537-2847316:-|nuORF', 'nc|ENSG00000006756|P51689-2|ARSD', 'nc|ENSG00000006756|P51689-3|ARSD', 'ENSG00000006756|ENST00000381154|ARSD'] 73479 18157 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep5 989.5467196310099 989.54562993586 76.647 2 0.13822877987306262 0.0007045974986788797 0.003965360511732701 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 97287 9712 SEAFSVASAA True H1975_Epitope_Rep3 938.4345259492999 938.43397496793 42.377 1 0.13822267982921943 0.0007045974986788797 0.00396591696589412 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 91919 11695 RKLMMILAM True NCI_RA007_Epitope_Rep3 1105.6173991763699 1105.61630993586 53.118 2 0.13821506022009064 0.0007045974986788797 0.003966612145411512 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 78171 7735 NYARGHYTI True PC9_epitope_Rep5 1093.5304920228102 1093.52938993586 34.694 2 0.13821289644778545 0.0007045974986788797 0.003966809580439027 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 75223 12034 NIDPITM[Oxidation]AY True H1975_Epitope_Rep3 1052.48484765044 1052.4842749679299 51.449 1 0.13821150003351418 0.0007045974986788797 0.00396693700247156 ['ENSG00000116285|ENST00000377482|ERRFI1'] 9893 19540 AYLKGTVLF True PC9_epitope_Rep3 1010.5800679841799 1010.57896993586 80.393 2 0.1382022335657539 0.0007045974986788797 0.003967782665201602 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 8050 6608 ATDPTIHTV True PC9_epitope_Rep2 953.4818104948899 953.48070993586 30.829 2 0.13820162818670242 0.0007045974986788797 0.003967837918622228 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 39634 19790 HLPDAAALLPV True PC9_epitope_Rep4 1115.63389446219 1115.63278993586 84.248 2 0.13820127805224894 0.0007045974986788797 0.003967869876015926 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 128735 6551 VPYGVGKAA True PC9_epitope_Rep1 860.4756029156398 860.4745099358599 30.003 2 0.13819632953427513 0.0007045974986788797 0.0039683215632910105 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 45828 5356 ISDHGTVTY True H1975_Epitope_Rep3 991.46107505031 991.45996993586 25.668 2 0.1381962639837109 0.0007045974986788797 0.003968327546909962 ['ENSG00000005893|ENST00000200639|LAMP2', 'nc|ENSG00000005893|P13473-2|LAMP2', 'nc|ENSG00000005893|P13473-3|LAMP2'] 41403 18325 HYGLPVVV True PC9_epitope_Rep1 882.49633836022 882.49524993586 75.276 2 0.13819486692775235 0.0007045974986788797 0.003968455075784887 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 97504 4792 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 23.522 2 0.13819116759125127 0.0007045974986788797 0.003968792785661559 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 95743 11829 RYGSPINTF True PC9_epitope_Rep6 1053.52434401321 1053.5232499358601 56.706 2 0.13819031663002312 0.0007045974986788797 0.0039688704733493035 ['ENSG00000188112|ENST00000341865|C6orf132'] 103414 8147 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 36.694 2 0.13818436373266085 0.0007045974986788797 0.003969413979493047 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 71489 8849 LYWSHPRKF True PC9_epitope_Rep4 1232.6454622053996 1232.6438249037901 41.569 3 0.13818186309306255 0.0007045974986788797 0.003969642312640575 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 40845 6530 HSDTDALGY True H1975_Epitope_Rep3 977.4090394774498 977.40794993586 30.084 2 0.13817914406262696 0.0007045974986788797 0.003969890601787078 ['ENSG00000163898|ENST00000296252|LIPH'] 83304 7667 PTDPKVVVY True H1975_Epitope_Rep2 1016.5542471591598 1016.55314993586 34.443 2 0.1381765109692576 0.0007045974986788797 0.003970131058213398 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 97501 10049 SEEPDALSV True H1975_Epitope_Rep3 945.4291062156899 945.42855496793 43.689 1 0.1381751580818504 0.0007045974986788797 0.003970254610700109 ['ENSG00000104442|ENST00000276569|ARMC1', 'ENST00000523384.1_1_8:66525632-66539633:-|nuORF'] 115631 8902 TRVQSVEQI True PC9_epitope_Rep5 1058.5720224816198 1058.57092993586 39.185 2 0.1381702687999659 0.0007045974986788797 0.003970701156260474 ['ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'ENST00000486955.2_1_10:126686512-126691658:-|nuORF', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 128769 18654 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 76.541 2 0.13816803080149015 0.0007045974986788797 0.00397090557265513 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 74945 19450 NHLREIWEL True PC9_epitope_Rep5 1208.6302060640799 1208.62855490379 79.865 3 0.13816787956605767 0.0007045974986788797 0.003970919386714026 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'ENST00000555791.5_1_15:91527220-91537794:-|nuORF'] 85170 5380 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47687496793 25.731 1 0.13815833057451676 0.0007045974986788797 0.003971791701471494 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 31775 6624 GEIASFDKA True NCI_RA007_Epitope_Rep3 936.4552613938799 936.45416993586 33.117 2 0.13815722906646485 0.0007045974986788797 0.003971892338092 ['ENSG00000034510|ENST00000233143|TMSB10'] 90634 4487 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 22.378 3 0.13815545017750783 0.0007045974986788797 0.003972054867310949 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 115109 7752 TRDETNYGI True PC9_epitope_Rep4 1067.4883524273098 1067.48724993586 37.21 2 0.13815481536044916 0.0007045974986788797 0.003972112869332639 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 68083 12766 LTDLYSPEY True H1975_Epitope_Rep2 1099.50735653639 1099.50677496793 54.208 1 0.1381533671679181 0.0007045974986788797 0.003972245191054889 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 45426 8461 IQHPSNVL True PC9_epitope_Rep1 906.49231560894 906.49120993586 37.381 2 0.13815121612466805 0.0007045974986788797 0.003972441740480644 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 8617 18563 ATYVFLHTV True PC9_epitope_Rep5 1049.5545815123298 1049.5534899358602 76.428 2 0.1381448964153442 0.0007045974986788797 0.003973019253288952 ['ENSG00000123353|ENST00000243045|ORMDL2'] 48864 8155 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54806993586 36.347 2 0.13813585904397543 0.0007045974986788797 0.00397384525809336 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 39151 6946 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.54013490379 33.954 3 0.1381313148371155 0.0007045974986788797 0.003974260657321223 ['ENSG00000156482|ENST00000287038|RPL30'] 120242 4501 VECPPPRTTA True H1975_Epitope_Rep2 1069.52262976105 1069.5215299358601 22.424 2 0.13813100951865573 0.0007045974986788797 0.003974288568914683 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 77333 11216 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.49727496793 48.113 1 0.13813074752169616 0.0007045974986788797 0.003974312520299272 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 45350 12784 IQDEKYYQI True PC9_epitope_Rep2 1198.58700383942 1198.5859099358602 54.476 2 0.1381305250006669 0.0007045974986788797 0.003974332862963387 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8', 'nc|ENSG00000147099|Q9BY41-6|HDAC8', 'nc|ENSG00000147099|Q9BY41-5|HDAC8'] 56081 8690 LATNAAVTVLR True H1975_Epitope_Rep1 1127.6662572196299 1127.6651699358601 38.357 2 0.1381197660418651 0.0007045974986788797 0.003975316559871742 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 121557 20234 VFDPKVFTF True PC9_epitope_Rep4 1098.57498260374 1098.57388993586 85.972 2 0.13811947184847892 0.0007045974986788797 0.00397534346150282 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 7086 5066 AQSGHEVTL True NCI_RA007_Epitope_Rep4 940.46140940348 940.46030993586 25.988 2 0.13811849012174265 0.0007045974986788797 0.0039754332338611705 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1', 'ENST00000597559.5_1_19:16547732-16582756:-|nuORF'] 28932 10182 FTDPGQVAY True H1975_Epitope_Rep1 996.4552613938799 996.45471496793 44.104 1 0.1381184537611057 0.0007045974986788797 0.003975436558837294 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 131001 10297 VTDPSTLEQY True H1975_Epitope_Rep3 1151.53463391339 1151.53352993586 44.661 2 0.13811677222690102 0.0007045974986788797 0.003975590328707648 ['ENSG00000197081|ENST00000356956|IGF2R'] 64067 6750 LPASNLAGKEA True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 33.159 2 0.1381123882153913 0.0007045974986788797 0.00397599125747243 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 88587 13887 QTDNIIYVY True H1975_Epitope_Rep3 1127.5498900547097 1127.54937496793 58.726 1 0.13810878230419615 0.0007045974986788797 0.003976321057022561 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 54256 18612 KWNPTAGVAF True PC9_epitope_Rep3 1089.56072952193 1089.5596299358601 76.814 2 0.13810810473052076 0.0007045974986788797 0.003976383031480075 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 112102 17831 TIVNELVRV True PC9_epitope_Rep4 1041.61824439805 1041.6171499358602 76.621 2 0.1381028467852158 0.0007045974986788797 0.003976863983350724 ['ENSG00000171298|ENST00000302262|GAA'] 47915 8514 IYIKQIKTF True NCI_RA007_Epitope_Rep3 1152.6906810623198 1152.6890249037901 40.562 3 0.13809887218797115 0.0007045974986788797 0.003977227583728682 ['ENSG00000103479|ENST00000262133|RBL2'] 34802 9468 GQHPNIITL True NCI_RA007_Epitope_Rep3 991.5450794577899 991.5439899358599 44.343 2 0.13809875623063375 0.0007045974986788797 0.00397723819212305 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 41559 18565 HYSPIYLSF True PC9_epitope_Rep6 1125.5494961318898 1125.54838993586 84.05 2 0.13809293656073116 0.0007045974986788797 0.003977770642475727 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 141098 15886 YSQELSLLY True H1975_Epitope_Rep2 1114.55464108198 1114.55354993586 66.306 2 0.1380901847314314 0.0007045974986788797 0.003978022436044798 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 71246 16959 LYPLTNYTF True NCI_RA007_Epitope_Rep4 1130.56481184286 1130.56370993586 73.497 2 0.1380843411328967 0.0007045974986788797 0.0039785571801546704 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 89420 14623 QYASRFVQL True PC9_epitope_Rep4 1110.5821932425 1110.58108993586 64.177 2 0.138080373450509 0.0007045974986788797 0.0039789203008846735 ['ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-2|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 120664 6220 VEILANDQGNR True PC9_epitope_Rep6 1227.6207635791898 1227.6196699358602 32.394 2 0.1380766600233991 0.0007045974986788797 0.003979260181989017 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 135393 20656 WHDSDWIL True PC9_epitope_Rep2 1070.48214484806 1070.48104993586 84.889 2 0.13807383429639783 0.0007045974986788797 0.0039795188332778075 ['ENSG00000107625|ENST00000373585|DDX50'] 89486 16525 QYGTFCEKF True PC9_epitope_Rep5 1121.4851816231699 1121.48408993586 68.565 2 0.13807116097239452 0.0007045974986788797 0.003979763549764553 ['ENSG00000181523|ENST00000326317|SGSH', 'ENST00000575282.5_1_17:78187814-78194112:-|nuORF', 'ENST00000570923.1_1_17:78185753-78194107:-|nuORF'] 114715 18714 TQIEDAVSL True PC9_epitope_Rep5 974.4920408254198 974.49094993586 77.002 2 0.13806649782670097 0.0007045974986788797 0.003980190450483039 ['ENSG00000183431|ENST00000373019|SF3A3', 'INPP5B-SF3A3|1|fusion'] 67399 5494 LSSPATLNSR True NCI_RA007_Epitope_Rep4 1044.5563724174801 1044.55526993586 27.721 2 0.13806332067037183 0.0007045974986788797 0.003980481338108109 ['CON__P00761'] 77843 11287 NVELDPEIQ True NCI_RA007_Epitope_Rep2 1055.51350454599 1055.51297496793 48.492 1 0.13805088210476907 0.0007045974986788797 0.00398162036548746 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 53658 7260 KSDHTDVLYY True H1975_Epitope_Rep2 1239.57716743171 1239.5755349037902 32.86 3 0.1380473898553996 0.0007045974986788797 0.003981940216600058 ['SWT1|p.N686Kfs*3|1|0.25|ENSG00000116668|chr1:185214588-185214589|-/A|frameshift_variant', 'ENSG00000116668|ENST00000367500|SWT1'] 140938 11661 YSESSQLLY True H1975_Epitope_Rep2 1088.50260550912 1088.5015099358602 49.926 2 0.13804324630182147 0.0007045974986788797 0.003982319752905625 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 140310 12515 YRDETLSGSEL True PC9_epitope_Rep3 1268.5884603913998 1268.5873699358601 53.163 2 0.13803883230086342 0.0007045974986788797 0.003982724100715898 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 70919 18842 LYFHINQTL True PC9_epitope_Rep4 1147.60259433391 1147.6014899358602 80.563 2 0.138036850274315 0.0007045974986788797 0.003982905678937917 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 91280 11949 RGLDIEGVKTV True PC9_epitope_Rep2 1185.67173652289 1185.6700949037902 51.284 3 0.13803683494754984 0.0007045974986788797 0.003982907083091684 ['ENST00000471144.1_1_20:47852594-47852858:+|nuORF', 'ENST00000484427.5_1_20:47852594-47860368:+|nuORF', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27'] 54770 16305 KYNANFVTF True PC9_epitope_Rep4 1102.54474510462 1102.54364993586 70.677 2 0.1380341611715376 0.0007045974986788797 0.003983152047214444 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 107199 14800 SVIPQIQKV True PC9_epitope_Rep1 1010.6124307416198 1010.61132993586 61.748 2 0.13803157194025686 0.0007045974986788797 0.003983389279789652 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 40717 6376 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 29.928 2 0.1380302192568797 0.0007045974986788797 0.003983513221966157 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 56862 18622 LDPHLVLDQLR True PC9_epitope_Rep4 1317.7404847890498 1317.73882490379 79.707 3 0.13802886722816804 0.0007045974986788797 0.003983637107971819 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 90784 4825 RESGLKYVA True NCI_RA007_Epitope_Rep4 1021.5556441414899 1021.55454993586 24.994 2 0.13802691213991364 0.0007045974986788797 0.003983816258895568 ['ENSG00000090013|ENST00000263368|BLVRB'] 43976 17104 IIEPSLRQL True PC9_epitope_Rep5 1067.6338944621898 1067.63278993586 70.812 2 0.1380215407404894 0.0007045974986788797 0.003984308498272892 ['ENSG00000221983|ENST00000442744|UBA52'] 157 11127 AADPSVVNL True H1975_Epitope_Rep2 884.46034677432 884.4597949679301 47.835 1 0.1380119445145497 0.0007045974986788797 0.003985188054003952 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 99301 17805 SHSDYLLTI True PC9_epitope_Rep4 1047.52367530687 1047.52256993586 76.52 2 0.13801026253290283 0.0007045974986788797 0.00398534223821533 ['ENSG00000120833|ENST00000551556|SOCS2'] 116740 13171 TVDNARIVL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 55.667 2 0.1380082921870646 0.0007045974986788797 0.003985522863759016 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 105012 19036 SRDLFTYTV True PC9_epitope_Rep1 1100.55022440788 1100.54912993586 78.013 2 0.13800651459130348 0.0007045974986788797 0.003985685826469801 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 96359 14402 RYTLQASTF True PC9_epitope_Rep1 1085.5505587610498 1085.54946993586 60.221 2 0.13797840807208284 0.0007045974986788797 0.003988263393908278 ['ENSG00000055130|ENST00000325222|CUL1'] 131157 13445 VTEIMSMGY True H1975_Epitope_Rep1 1029.45110461357 1029.45057496793 56.83 1 0.13797481040195247 0.0007045974986788797 0.003988593444891812 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 28501 10685 FSDYLHPQY True H1975_Epitope_Rep2 1168.5189242796 1168.5178299358602 46.124 2 0.1379735342292574 0.0007045974986788797 0.003988710527727421 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 110103 3649 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 18.988 2 0.13797323721458213 0.0007045974986788797 0.0039887377779132685 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 68404 15581 LTETEDWLY True H1975_Epitope_Rep2 1168.5288202569598 1168.52827496793 65.088 1 0.13797191807675488 0.0007045974986788797 0.00398885880699102 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 78315 16071 NYIRITSEI True PC9_epitope_Rep2 1107.59242357303 1107.5913299358601 67.074 2 0.13797003984177508 0.0007045974986788797 0.003989031138733737 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 38351 9264 HEIESLYTKL True NCI_RA007_Epitope_Rep5 1231.6448530687098 1231.6437499358601 42.282 2 0.13796505640842283 0.0007045974986788797 0.003989488414229619 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 26177 12427 FHDESTQVQL True PC9_epitope_Rep3 1202.5567663402999 1202.5556699358601 52.827 2 0.137960664121471 0.0007045974986788797 0.003989891489660598 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 109993 11984 TEILGTQEIA True H1975_Epitope_Rep2 1073.5604547384098 1073.5593499358602 51.177 2 0.13794393906072602 0.0007045974986788797 0.00399142669939855 ['ENSG00000173442|ENST00000309295|EHBP1L1', 'EHBP1L1|p.L1411Rfs*31|1|0.26|ENSG00000173442|chr11:65590541-65590541|T/-|frameshift_variant', 'ENST00000526990.1_1_11:65349145-65351290:+|nuORF'] 28937 10334 FTDPGQVAY True H1975_Epitope_Rep3 996.4552613938799 996.45471496793 44.801 1 0.13793836086762337 0.0007045974986788797 0.003991938857214182 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 37856 21324 GYMEGYYTF True PC9_epitope_Rep5 1129.44264810485 1129.4415499358602 87.079 2 0.13793301002690914 0.0007045974986788797 0.003992430201949717 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 95351 13215 RVVDELDNQM True PC9_epitope_Rep1 1217.57103650545 1217.56992993586 55.695 2 0.13793292181547875 0.0007045974986788797 0.003992438302528211 ['nc|ENSG00000085231|Q9Y3D8-2|AK6', 'ENSG00000085231|ENST00000380822|AK6'] 31986 5379 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 25.727 2 0.13792924934180287 0.0007045974986788797 0.003992775565336024 ['ENSG00000108344|ENST00000264639|PSMD3'] 73303 19354 M[Oxidation]TDPIRILV True PC9_epitope_Rep5 1072.5950668057599 1072.59396993586 79.491 2 0.13792560741125418 0.0007045974986788797 0.003993110051051464 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 96714 21048 SALPDIKVLTL True PC9_epitope_Rep2 1168.7067250492798 1168.70562993586 86.415 2 0.1379197184946404 0.0007045974986788797 0.0039936509653142205 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 110105 3815 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 19.693 2 0.13791845687415083 0.0007045974986788797 0.003993766858288122 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 29926 16094 FVYENPISL True H1975_Epitope_Rep2 1080.54916177872 1080.5480699358602 67.114 2 0.13791465714454665 0.0007045974986788797 0.0039941159231111235 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 138435 15139 YHISLEHEIL True PC9_epitope_Rep6 1252.64518742188 1252.6435349037902 70.298 3 0.13790838518829399 0.0007045974986788797 0.003994692166821532 ['ENSG00000168002|ENST00000301788|POLR2G'] 35007 10465 GQTITISRV True PC9_epitope_Rep1 973.5556441414899 973.55454993586 45.143 2 0.1379016599223047 0.0007045974986788797 0.003995310150335165 ['nc|ENSG00000145216|Q6UN15-4|FIP1L1', 'nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1', 'ENST00000513008.5_1_4:54292015-54325613:+|nuORF', 'ENST00000513975.5_1_4:54244032-54306933:+|nuORF', 'ENSG00000145216|ENST00000337488|FIP1L1', 'ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 89458 18758 QYESKVFYL True PC9_epitope_Rep5 1175.5862755634298 1175.5851699358602 77.163 2 0.13789847884355474 0.0007045974986788797 0.003995602492064045 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 53378 13776 KQTDVLQQL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 58.009 2 0.137890196495396 0.0007045974986788797 0.003996363740717261 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 47823 13928 IYGYVAEQF True NCI_RA007_Epitope_Rep4 1088.5178616504397 1088.51676993586 60.85 2 0.13788949941050235 0.0007045974986788797 0.003996427817855952 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 99039 14016 SHFEGLITT True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 59.191 2 0.13788748520908362 0.0007045974986788797 0.003996612972128628 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 115540 19322 TRSELLPFL True PC9_epitope_Rep6 1074.6073453611798 1074.6062499358602 86.971 2 0.13787630117950184 0.0007045974986788797 0.003997641211874359 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 99403 16343 SHVIQDIAL True PC9_epitope_Rep5 994.5447451046199 994.54364993586 67.86 2 0.13785961464718777 0.0007045974986788797 0.003999175828632516 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 60622 20263 LHIGSVITL True PC9_epitope_Rep5 951.5753169569101 951.57420993586 82.992 2 0.1378581556266034 0.0007045974986788797 0.003999310038655223 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 120520 16449 VEFLEPLEA True H1975_Epitope_Rep1 1045.5331773614098 1045.53208993586 68.634 2 0.1378578257051503 0.0007045974986788797 0.003999340387553471 ['ENSG00000122965|ENST00000261741|RBM19'] 76901 13579 NRDNVGLVL True PC9_epitope_Rep2 998.5508931142199 998.54978993586 57.523 2 0.13785739128238192 0.0007045974986788797 0.003999380349692825 ['ENSG00000013523|ENST00000251089|ANGEL1'] 65888 13821 LSDPAGAIIY True H1975_Epitope_Rep2 1018.5335117145798 1018.53297496793 58.31 1 0.1378497895784755 0.0007045974986788797 0.004000079687201531 ['ENSG00000178921|ENST00000314666|PFAS'] 115098 18244 TRDELPYTF True PC9_epitope_Rep5 1140.54513902744 1140.5440499358601 75.189 2 0.13784877926141123 0.0007045974986788797 0.004000172642923406 ['nc|ENSG00000087269|P78316-2|NOP14', 'ENSG00000087269|ENST00000416614|NOP14'] 142565 21143 YYLNEIQSF True PC9_epitope_Rep2 1175.5498900547097 1175.5487899358602 86.781 2 0.1378451320557574 0.0007045974986788797 0.004000508227284148 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 107514 6134 SVNSTVLVK True NCI_RA007_Epitope_Rep2 945.5494961318899 945.54838993586 28.467 2 0.13784110140977893 0.0007045974986788797 0.004000879124920128 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML'] 35757 7998 GTIFGIYRK True NCI_RA007_Epitope_Rep3 1053.5971150306498 1053.5960099358601 38.556 2 0.1378359246413571 0.0007045974986788797 0.004001355537979888 ['ENSG00000165140|ENST00000375326|FBP1'] 10023 8020 AYRQGHFTY True PC9_epitope_Rep1 1141.53049202281 1141.52884490379 35.67 3 0.13783043815979248 0.0007045974986788797 0.004001860514924457 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 207 10215 AAFEKALEV True NCI_RA007_Epitope_Rep4 976.5229470308798 976.52184993586 46.148 2 0.13782603813443864 0.0007045974986788797 0.004002265539775431 ['IFIT5|p.R294Gfs*4|1|0.28|ENSG00000152778|chr10:89418079-89418079|A/-|frameshift_variant', 'ENSG00000152778|ENST00000371795|IFIT5'] 35357 6145 GRYAGEESL True PC9_epitope_Rep4 980.4563240230399 980.45522993586 30.655 2 0.13782518730865134 0.0007045974986788797 0.00400234386345631 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 29399 11990 FVDPSQDHAL True PC9_epitope_Rep2 1127.52473793603 1127.52364993586 51.438 2 0.13782315842321538 0.0007045974986788797 0.004002530640803649 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 7219 10180 ARDDQIHIL True PC9_epitope_Rep4 1079.57235683479 1079.5712499358601 46.834 2 0.13781222065960566 0.0007045974986788797 0.004003537709976819 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 25293 11597 FDQAFGLPR True NCI_RA007_Epitope_Rep1 1049.5294293936497 1049.52832993586 49.08 2 0.1378006273819668 0.0007045974986788797 0.004004605407826682 ['ENSG00000106211|ENST00000248553|HSPB1'] 126343 20533 VLIPKLPQL True PC9_epitope_Rep2 1019.6743027221899 1019.67320993586 84.412 2 0.13779889737060216 0.0007045974986788797 0.004004764759613561 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 90155 7498 REDENLQVP True H1975_Epitope_Rep3 1098.53055159246 1098.5294499358602 33.822 2 0.13779310025268807 0.0007045974986788797 0.004005298779363728 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF', 'MTMR3|p.C235Qfs*20|1|0.17|ENSG00000100330|chr22:30007143-30007152|GCTGTGGACA/-|frameshift_variant'] 77842 11529 NVELDPEIQ True NCI_RA007_Epitope_Rep1 1055.51350454599 1055.5124099358602 48.814 2 0.1377929854997381 0.0007045974986788797 0.004005309350903875 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 17678 15807 EHLQVITTL True PC9_epitope_Rep4 1052.5866099166 1052.58550993586 68.725 2 0.13779222329573446 0.0007045974986788797 0.0040053795691478815 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 34882 17890 GQLPNLQTV True PC9_epitope_Rep2 968.5290950404801 968.52798993586 74.116 2 0.13778906635055826 0.0007045974986788797 0.004005670416523515 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 75825 17238 NLPDEIYHV True PC9_epitope_Rep2 1098.5345743437401 1098.53346993586 71.567 2 0.13778517695222395 0.0007045974986788797 0.004006028773084373 ['ENSG00000148335|ENST00000372483|NTMT1'] 133981 7418 VYISEHEHF True NCI_RA007_Epitope_Rep1 1159.5298233164701 1159.5281849037901 32.851 3 0.13778224011377946 0.0007045974986788797 0.004006299384885196 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 20788 10456 EQIAEFKEA True PC9_epitope_Rep1 1063.51858992643 1063.51748993586 45.106 2 0.13778019920920517 0.0007045974986788797 0.004006487452482496 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF'] 107809 8095 SVTSEGIKAV True PC9_epitope_Rep2 989.5393253710098 989.53822993586 36.496 2 0.13777870424038985 0.0007045974986788797 0.004006625218113753 ['nc|ENSG00000151743|Q8IY45-2|AMN1', 'ENSG00000151743|ENST00000281471|AMN1'] 127353 16739 VMSATFAKF True PC9_epitope_Rep5 1000.5051887917599 1000.50408993586 69.393 2 0.13777850450653722 0.0007045974986788797 0.0040066436245117356 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 11663 13333 DGQFSVLFTK True H1975_Epitope_Rep1 1140.5815245361598 1140.5804299358601 56.39 2 0.13777233679568868 0.0007045974986788797 0.004007212048772085 ['CON__P12763'] 26242 11230 FHEGDAYVV True PC9_epitope_Rep4 1035.4661604307498 1035.4650699358601 50.972 2 0.13776939900056126 0.0007045974986788797 0.00400748282785282 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 115420 19937 TRLPIDVQL True PC9_epitope_Rep5 1053.61824439805 1053.6171499358602 81.742 2 0.1377578936834353 0.0007045974986788797 0.004008543457059369 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 115014 10199 TRAQIEDTL True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 44.22 2 0.13775695751613795 0.0007045974986788797 0.004008629770801092 ['ENSG00000007080|ENST00000445755|CCDC124'] 46623 8657 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 38.295 2 0.1377547100274959 0.0007045974986788797 0.004008836994641557 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 105996 8405 SSVATITRL True H1975_Epitope_Rep3 946.54474510462 946.54364993586 37.314 2 0.13775289124791407 0.0007045974986788797 0.004009004698239265 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 140560 17578 YRPPELLL True PC9_epitope_Rep6 999.5753169569099 999.57420993586 80.253 2 0.13775024410364384 0.0007045974986788797 0.004009248794986857 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 100626 22200 SLDDLLTNV True PC9_epitope_Rep3 988.5076908895601 988.50658993586 90.678 2 0.1377496599111205 0.0007045974986788797 0.004009302666149241 ['ENSG00000143819|ENST00000272167|EPHX1'] 8590 4438 ATVTPSPVK True NCI_RA007_Epitope_Rep2 898.5123823471799 898.51128993586 21.896 2 0.13774961345585027 0.0007045974986788797 0.004009306950040712 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 101285 21129 SLIFKLEEL True PC9_epitope_Rep2 1090.6274120994199 1090.62630993586 86.731 2 0.13774751700136506 0.0007045974986788797 0.004009500280150695 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2'] 75020 14197 NHSDYNMVL True PC9_epitope_Rep3 1091.47059418819 1091.46948993586 59.693 2 0.13774451312560704 0.0007045974986788797 0.0040097773065986015 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 104259 17783 SQIEADFRL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 73.692 2 0.1377426362704364 0.0007045974986788797 0.00400995040543585 ['ENSG00000198900|ENST00000361337|TOP1', 'TOP1-CDH4|1|fusion'] 132224 16212 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 70.303 2 0.13773886921743034 0.0007045974986788797 0.004010297855994766 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 8789 12200 AVDPRFLAY True H1975_Epitope_Rep2 1050.5498304850598 1050.5487299358601 52.009 2 0.13773263204606076 0.0007045974986788797 0.004010873201075379 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 118236 9548 TYLEKAIKI True NCI_RA007_Epitope_Rep1 1077.6433965167298 1077.6422899358602 41.137 2 0.1377325872881192 0.0007045974986788797 0.004010877330046815 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 41067 6230 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60750490379 28.942 3 0.1377307681305802 0.0007045974986788797 0.00401104515297584 ['CON__P12763'] 120174 4582 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 22.729 2 0.13773053870351307 0.0007045974986788797 0.0040110663188282734 ['ENSG00000155506|ENST00000518297|LARP1'] 138485 5668 YHSEGETL True PC9_epitope_Rep1 934.40322582102 934.40212993586 26.623 2 0.13772945955096555 0.0007045974986788797 0.0040111658778036186 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF'] 88956 16075 QVIAGFNRL True PC9_epitope_Rep5 1016.57671393924 1016.57560993586 66.822 2 0.13772938306097202 0.0007045974986788797 0.004011172934605317 ['ENSG00000143256|ENST00000368010|PFDN2'] 87383 8780 QPTSVLDKATA True PC9_epitope_Rep1 1129.59790287629 1129.5968099358602 38.613 2 0.13772659653773642 0.0007045974986788797 0.004011430021600306 ['ENSG00000165507|ENST00000298295|DEPP1'] 47762 20737 IYEPNFIFF True NCI_RA007_Epitope_Rep4 1188.5855472874398 1188.5844499358602 89.847 2 0.1377259529325991 0.0007045974986788797 0.0040114894034735515 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 133869 16573 VYGPMKNYL True PC9_epitope_Rep5 1083.5423025764699 1083.54120993586 68.752 2 0.13771938912662934 0.0007045974986788797 0.0040120950590875415 ['ENSG00000166825|ENST00000300060|ANPEP'] 130513 4944 VSQEPFPNK True NCI_RA007_Epitope_Rep5 1044.5240096600398 1044.52290993586 25.718 2 0.13771850310630843 0.0007045974986788797 0.004012176820900611 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 80051 15366 PFHTSTEMF True PC9_epitope_Rep5 1095.46953155903 1095.46842993586 64.115 2 0.13771088557399996 0.0007045974986788797 0.004012879833587222 ['ENSG00000162496|ENST00000616661|DHRS3', 'DHRS3|p.Q228H|1|0.07|ENSG00000162496|chr1:12578732-12578732|C/G|missense_variant'] 90278 8429 REELFIVSK True NCI_RA007_Epitope_Rep1 1119.62880908175 1119.6277099358601 36.789 2 0.13770901849552156 0.0007045974986788797 0.004013052162562072 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 111097 9770 THDTFQNEL True PC9_epitope_Rep4 1103.48835242731 1103.48724993586 45.221 2 0.13770128924161626 0.0007045974986788797 0.004013765640802574 ['ENSG00000198642|ENST00000359039|KLHL9'] 1566 6565 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43308993586 30.163 2 0.1377009750404706 0.0007045974986788797 0.004013794646991682 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 138396 5235 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 25.526 2 0.13767958280121997 0.0007045974986788797 0.0040157700078151445 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 118327 14429 TYMGHTGAVW True PC9_epitope_Rep5 1121.4964150132098 1121.4953099358602 60.5 2 0.13766503475732655 0.0007045974986788797 0.004017113924691709 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 20790 9272 EQIAEFKEA True PC9_epitope_Rep4 1063.51858992643 1063.51748993586 43.269 2 0.13765431632969755 0.0007045974986788797 0.004018104354608345 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF'] 90632 4274 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 21.557 3 0.13765061185659677 0.0007045974986788797 0.00401844672042133 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 104050 3924 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 21.287 2 0.13764666486175153 0.0007045974986788797 0.004018811531751462 ['ENSG00000130935|ENST00000253247|NOL11'] 53863 19589 KTIEDTLMTV True PC9_epitope_Rep3 1149.59512599497 1149.5940299358601 80.586 2 0.13764607322273917 0.0007045974986788797 0.0040188662183600725 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 2058 7265 AELATRALP True NCI_RA007_Epitope_Rep3 940.5341804209199 940.53308993586 35.687 2 0.1376404545207499 0.0007045974986788797 0.004019385605123106 ['ENSG00000173801|ENST00000393931|JUP'] 77254 17822 NRYGQLTIL True PC9_epitope_Rep5 1076.59784330664 1076.59674993586 73.572 2 0.13763863818844607 0.0007045974986788797 0.004019553519131304 ['ENST00000397656.8_1_12:111066004-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-4|TCTN1', 'ENST00000495659.6_1_12:111052207-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-3|TCTN1', 'nc|ENSG00000204852|Q2MV58|TCTN1', 'ENSG00000204852|ENST00000397659|TCTN1'] 78223 22799 NYGDYFNVF True PC9_epitope_Rep5 1137.47672511445 1137.47562993586 92.687 2 0.13763815994176057 0.0007045974986788797 0.004019597732634792 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 23977 13053 EYMEHVYLI True NCI_RA007_Epitope_Rep3 1195.5583465634297 1195.55724993586 58.621 2 0.13763377402278715 0.0007045974986788797 0.004020003229595298 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 34640 15856 GQAFVIFK True PC9_epitope_Rep4 908.5119884243599 908.51088993586 68.919 2 0.137630835699777 0.0007045974986788797 0.0040202749127616925 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 118274 20264 TYLPAPEGLKF True PC9_epitope_Rep3 1234.65977485686 1234.6586699358602 83.207 2 0.13763079278274587 0.0007045974986788797 0.00402027888109003 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 128224 11560 VPNKFLVTA True PC9_epitope_Rep6 987.5753169569099 987.57420993586 55.57 2 0.13762525332579256 0.0007045974986788797 0.0040207911201664845 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 137151 21985 YAVELFEGL True PC9_epitope_Rep4 1039.5226126777097 1039.52207496793 92.784 1 0.13762462796697936 0.0007045974986788797 0.004020848951772572 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 106140 10922 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.4600299358601 47.043 2 0.13762445561580902 0.0007045974986788797 0.0040208648905188694 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 56091 15579 LATRALPEL True PC9_epitope_Rep3 982.5811306133398 982.58002993586 65.073 2 0.13762061015976304 0.0007045974986788797 0.004021220528083755 ['ENSG00000173801|ENST00000393931|JUP'] 128539 4892 VPSYPSKSA True PC9_epitope_Rep1 934.47599683846 934.47488993586 23.681 2 0.13761985044163955 0.0007045974986788797 0.004021290792431748 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 18130 13815 EIIRQLNGV True PC9_epitope_Rep3 1040.59784330664 1040.59674993586 58.218 2 0.13761612124665465 0.0007045974986788797 0.004021635713568309 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 32125 6705 GETLLQRAA True NCI_RA007_Epitope_Rep3 957.5243440132099 957.52324993586 33.459 2 0.1376107911929952 0.0007045974986788797 0.004022128752333217 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1'] 44041 17165 IIIPEIQKV True PC9_epitope_Rep6 1051.66413196131 1051.66302993586 78.611 2 0.137610657294032 0.0007045974986788797 0.004022141138978506 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 107203 14917 SVIPQIQKV True PC9_epitope_Rep3 1010.6124307416198 1010.61132993586 62.513 2 0.13760693637132018 0.0007045974986788797 0.004022485366972079 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 57913 9413 LEGENIVSA True H1975_Epitope_Rep2 930.4658260775799 930.46472993586 41.174 2 0.13760410438017442 0.0007045974986788797 0.004022747378144133 ['ENST00000467586.5_1_17:74084367-74085867:-|nuORF', 'nc|ENSG00000182473|Q9UPT5-2|EXOC7', 'nc|ENSG00000182473|Q9UPT5-5|EXOC7', 'ENSG00000182473|ENST00000589210|EXOC7', 'nc|ENSG00000182473|Q9UPT5-6|EXOC7', 'nc|ENSG00000182473|Q9UPT5|EXOC7'] 49579 11184 KFSPNTSQF True PC9_epitope_Rep3 1054.5083595959002 1054.5072699358602 48.023 2 0.13760322715188922 0.0007045974986788797 0.004022828541290584 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 125457 15578 VIVEPLEQL True NCI_RA007_Epitope_Rep5 1038.5961119711399 1038.5950099358602 66.629 2 0.13759904594660832 0.0007045974986788797 0.0040232154181342045 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 54010 13419 KVFNDYTAV True PC9_epitope_Rep3 1055.52876068731 1055.52766993586 56.656 2 0.1375985711284627 0.0007045974986788797 0.0040232593542400405 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 74871 10156 NHHLFTTTI True PC9_epitope_Rep6 1082.5508931142201 1082.5497899358602 49.691 2 0.1375918378827811 0.0007045974986788797 0.004023882449339298 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 24894 16615 FAYEGPMYL True H1975_Epitope_Rep3 1089.4841189940098 1089.48357496793 69.411 1 0.13759013682543647 0.0007045974986788797 0.004024039880431186 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 22520 5723 ETGVPIAGR True NCI_RA007_Epitope_Rep2 898.4872302284999 898.48612993586 26.878 2 0.13758674024496334 0.0007045974986788797 0.004024354248662984 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 26397 15592 FHYEADGANVL True PC9_epitope_Rep2 1234.5618517207397 1234.56074993586 65.25 2 0.1375840650549504 0.0007045974986788797 0.00402460186619035 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 35906 10881 GTQPWFISK True NCI_RA007_Epitope_Rep4 1062.5498304850598 1062.5487299358601 48.706 2 0.13757468998186456 0.0007045974986788797 0.004025469748744346 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK'] 26186 21268 FHDGFLLEV True PC9_epitope_Rep1 1075.53384606775 1075.53274993586 86.632 2 0.13757120972032919 0.0007045974986788797 0.004025791975577185 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF', 'CEP76|p.V235Cfs*17|1|0.48|ENSG00000101624|chr18:12697227-12697228|-/C|frameshift_variant'] 94713 8838 RSDTPLIY True H1975_Epitope_Rep2 963.5025459394699 963.50144993586 38.962 2 0.13756799351825208 0.0007045974986788797 0.00402608977663765 ['ENSG00000196305|ENST00000443024|IARS1'] 95840 6823 RYISQTQGL True NCI_RA007_Epitope_Rep4 1064.5614577979197 1064.56036993586 32.866 2 0.13756524886044458 0.0007045974986788797 0.0040263439327587495 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1', 'nc|ENSG00000064393|Q9H2X6-2|HIPK2', 'nc|ENSG00000064393|Q9H2X6-3|HIPK2', 'ENSG00000064393|ENST00000406875|HIPK2', 'nc|ENSG00000110422|Q9H422-2|HIPK3', 'ENSG00000110422|ENST00000303296|HIPK3'] 24106 14795 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep1 1300.57578791316 1300.57468993586 61.729 2 0.13756303595097166 0.0007045974986788797 0.004026548860386815 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 78335 17832 NYISGIQTI True PC9_epitope_Rep6 1007.52876068731 1007.52817496793 81.221 1 0.13756177021600605 0.0007045974986788797 0.004026666079068487 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 78465 19644 NYMPGQLTI True PC9_epitope_Rep4 1035.5059170677498 1035.50480993586 83.679 2 0.1375605612182918 0.0007045974986788797 0.004026778046512384 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 104795 17728 SQYGEIVNI True PC9_epitope_Rep6 1021.5080252427299 1021.50692993586 80.824 2 0.13755169953426508 0.0007045974986788797 0.0040275988369904035 ['ENSG00000134597|ENST00000305536|RBMX2'] 74743 9792 NHANVVRLL True PC9_epitope_Rep2 1034.5985120129799 1034.59740993586 43.003 2 0.13754674408608186 0.0007045974986788797 0.004028057894677695 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 47770 23955 IYEPNFIFF True PC9_epitope_Rep3 1188.5855472874398 1188.5844499358602 97.428 2 0.13752813747944823 0.0007045974986788797 0.004029782016441796 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 91037 6720 RFKTQPVTF True NCI_RA007_Epitope_Rep3 1122.6185787512197 1122.61748993586 33.522 2 0.13752619818341616 0.0007045974986788797 0.004029961757125158 ['nc|nan|Q7Z7L8|C11orf96', 'ENSG00000187479|ENST00000617612|C11orf96'] 114617 20641 TQDSSILPL True PC9_epitope_Rep1 972.5127762699999 972.51166993586 84.217 2 0.13752057340386165 0.0007045974986788797 0.004030483126074603 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 76859 19593 NRDEMLVVL True PC9_epitope_Rep5 1087.5695799534699 1087.56848993586 80.416 2 0.1375140752007153 0.0007045974986788797 0.004031085537006228 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 45982 7093 ISETYDLK True NCI_RA007_Epitope_Rep1 967.48622716899 967.48512993586 31.584 2 0.13751396552143125 0.0007045974986788797 0.0040310957055044744 ['CON__P34955'] 106999 7436 SVFAGVGER True NCI_RA007_Epitope_Rep4 920.4715801643599 920.47048993586 35.246 2 0.13750671136187795 0.0007045974986788797 0.004031768303706345 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 118698 11336 TYTDVTPRQF True PC9_epitope_Rep6 1226.59315184902 1226.5920499358601 54.638 2 0.1375062314174712 0.0007045974986788797 0.004031812807573333 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 38102 5549 HAYDGKDYI True NCI_RA007_Epitope_Rep3 1080.48762415132 1080.48652993586 28.822 2 0.13750500358716103 0.0007045974986788797 0.004031926662965318 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'nc|ENSG00000206341|P01893|HLA-H'] 56362 8769 LDDLVSTGK True PC9_epitope_Rep3 946.49712620586 946.49602993586 38.682 2 0.13750426515544142 0.0007045974986788797 0.004031995138481095 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 41999 23707 IDFPGGILSF True PC9_epitope_Rep2 1064.55424715916 1064.5531499358601 96.659 2 0.13749844934417096 0.0007045974986788797 0.004032534484726205 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 40726 5609 HRTDSEIAL True PC9_epitope_Rep6 1040.5250722892 1040.5239699358601 29.646 2 0.13747865230058529 0.0007045974986788797 0.004034370956490556 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 26255 15468 FHEGDVITL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 71.667 2 0.13747752062815913 0.0007045974986788797 0.004034475961026219 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 88265 11432 QSDYYASYY True H1975_Epitope_Rep2 1158.4505699362599 1158.4499749679298 49.026 1 0.13747094210982228 0.0007045974986788797 0.004035086415824163 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 76028 23187 NMAELFAVV True PC9_epitope_Rep1 992.5001034113199 992.49900993586 93.983 2 0.1374708329570932 0.0007045974986788797 0.0040350965454420875 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 127810 10686 VPEGFVIPR True H1975_Epitope_Rep3 1012.5705659296399 1012.56946993586 46.179 2 0.13746706631810487 0.0007045974986788797 0.004035446113397315 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 8449 4990 ATPKFGPYQK True NCI_RA007_Epitope_Rep5 1135.6025943339098 1135.60093490379 25.899 3 0.1374663187568263 0.0007045974986788797 0.004035515495382158 ['ENSG00000150457|ENST00000382592|LATS2'] 100731 10902 SLDVGGPLRY True H1975_Epitope_Rep1 1075.56620882519 1075.5651099358602 46.897 2 0.13746007377546726 0.0007045974986788797 0.0040360951450868114 ['ENSG00000176894|ENST00000317479|PXMP2'] 13962 16193 DRDNVGLVL True PC9_epitope_Rep4 999.53490869691 999.53380993586 70.229 2 0.1374558614420689 0.0007045974986788797 0.004036486174008119 ['nc|ENSG00000174606|Q5VTE6-2|ANGEL2', 'ENSG00000174606|ENST00000366962|ANGEL2'] 104812 9830 SRAAEKLYL True PC9_epitope_Rep3 1049.58694426977 1049.58584993586 42.77 2 0.1374483134409117 0.0007045974986788797 0.004037186945149749 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 60534 17940 LHDISSLL True PC9_epitope_Rep4 896.49673228304 896.49562993586 77.057 2 0.13744542242848198 0.0007045974986788797 0.00403745538425861 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 87211 14973 QPITPGPSI True PC9_epitope_Rep3 908.4967322830399 908.49562993586 62.724 2 0.13743790880458828 0.0007045974986788797 0.00403815312919096 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 124761 17483 VHDEGVWAL True PC9_epitope_Rep2 1024.4977949121999 1024.49668993586 72.504 2 0.13743294347485674 0.0007045974986788797 0.00403861429488245 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 47754 16626 IYENRIYSL True PC9_epitope_Rep1 1169.6080736371698 1169.6069699358602 68.78 2 0.13742852399964073 0.0007045974986788797 0.004039024806988292 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF', 'ENST00000430836.1_1_20:3342707-3342845:-|nuORF', 'ENST00000397758.2_1_3:175436135-175436456:-|nuORF'] 71140 22903 LYLPSFFTY True PC9_epitope_Rep4 1149.57464825057 1149.57354993586 96.315 2 0.1374245541853836 0.0007045974986788797 0.00403939358660093 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 31390 7679 GDVDVSLPK True H1975_Epitope_Rep1 928.48656152216 928.48546993586 34.503 2 0.1374205819772417 0.0007045974986788797 0.004039762621938363 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 105016 18931 SRDLFTYTV True PC9_epitope_Rep5 1100.55022440788 1100.54912993586 77.841 2 0.1374095013664426 0.0007391625722857516 0.004040792234975091 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 140214 15843 YQVGVHYEL True PC9_epitope_Rep2 1106.5396597241802 1106.53856993586 66.198 2 0.1374066382479059 0.0007391625722857516 0.0040410583188480965 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 97794 8374 SELEAALQR True NCI_RA007_Epitope_Rep1 1015.5298233164699 1015.52872993586 36.575 2 0.13740491038477495 0.0007391625722857516 0.004041218906166297 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 97663 6939 SEGVTISYK True NCI_RA007_Epitope_Rep2 982.4971262058599 982.49602993586 31.612 2 0.13740470670757854 0.0007391625722857516 0.004041237836307766 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 115845 10523 TSDVGGYYY True H1975_Epitope_Rep2 1023.4185415319901 1023.41797496793 45.498 1 0.13740129620777616 0.0007391625722857516 0.004041554827603231 ['ENSG00000131711|ENST00000296755|MAP1B'] 139964 21368 YQDEVFGGF True PC9_epitope_Rep3 1060.4501760134397 1060.44967496793 87.491 1 0.137399569963548 0.0007391625722857516 0.004041715283960011 ['ENSG00000145907|ENST00000356245|G3BP1'] 95375 3598 RVYGGLTTK True NCI_RA007_Epitope_Rep3 993.5607295219299 993.55962993586 20.024 2 0.13739287314752952 0.0007391625722857516 0.004042337820248806 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 134050 20330 VYKAFVMETF True PC9_epitope_Rep3 1233.6103821362897 1233.60928993586 83.449 2 0.1373921026113037 0.0007391625722857516 0.004042409455412872 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 3221 7194 AGELTEDEVER True PC9_epitope_Rep4 1246.5677249468197 1246.5666299358602 34.975 2 0.13739017358854005 0.0007391625722857516 0.004042588798189348 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 8147 12978 ATELQSMMY True H1975_Epitope_Rep3 1072.45691827 1072.4563749679298 55.153 1 0.13738920740325622 0.0007391625722857516 0.004042678628160281 ['ENSG00000196284|ENST00000371459|SUPT3H'] 73351 6934 M[Oxidation]TEGSTVNTEY True H1975_Epitope_Rep2 1246.50234818938 1246.5012499358602 31.592 2 0.13738808686714918 0.0007391625722857516 0.004042782811195557 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 76850 19043 NRDELELEL True PC9_epitope_Rep3 1129.5615173675699 1129.5604299358602 78.469 2 0.1373849173758674 0.0007391625722857516 0.004043077512398159 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 115559 7274 TRSPVKVTL True PC9_epitope_Rep2 999.60767971435 999.60658993586 33.367 2 0.1373808111046558 0.0007391625722857516 0.004043459347565128 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 140897 12800 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep2 1177.4849072200898 1177.48380993586 54.341 2 0.13738071237380797 0.0007391625722857516 0.004043468528817724 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 118442 18174 TYPENWRAF True PC9_epitope_Rep5 1182.5458077337798 1182.54470993586 74.917 2 0.13737552260018873 0.0007391625722857516 0.004043951169151512 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 138474 13280 YHQPAPIAQL True PC9_epitope_Rep2 1136.5978433066398 1136.59674993586 56.358 2 0.13737429069557994 0.0007391625722857516 0.004044065742605497 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF'] 95934 13115 RYLEKPMEI True PC9_epitope_Rep1 1177.6165301458898 1177.61488490379 55.315 3 0.13736972812675324 0.0007391625722857516 0.004044490112906984 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 141144 9841 YSSPYPQEY True H1975_Epitope_Rep2 1132.4713053808398 1132.47020993586 42.84 2 0.13736304526585344 0.0007391625722857516 0.004045111773782562 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant'] 8205 6948 ATFPDPNVK True NCI_RA007_Epitope_Rep5 987.5025459394699 987.50144993586 33.411 2 0.1373617717888662 0.0007391625722857516 0.004045230247365903 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 120441 3822 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 19.8 2 0.13735135148182837 0.0007391625722857516 0.004046199794024396 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 6753 17305 AQDEHLITF True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 71.739 2 0.13734970822688372 0.0007391625722857516 0.004046352709959821 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 11842 8230 DHHENKYLL True PC9_epitope_Rep3 1167.56727145435 1167.56563490379 36.635 3 0.1373463790319192 0.0007391625722857516 0.004046662531489438 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 99834 20848 SILETVTAV True PC9_epitope_Rep1 931.52261267771 931.52150993586 85.017 2 0.13734328164141205 0.0007391625722857516 0.004046950801907814 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 43655 12491 IHDGAAPISL True PC9_epitope_Rep4 992.52909504048 992.52798993586 55.855 2 0.13733203631742802 0.0007391625722857516 0.004047997561499218 ['ENSG00000142798|ENST00000374695|HSPG2'] 12010 20174 DHSFSLEL True PC9_epitope_Rep1 946.4396113297399 946.43850993586 82.428 2 0.1373297375687567 0.0007391625722857516 0.004048211571161225 ['ENSG00000128272|ENST00000674920|ATF4'] 24347 18595 EYVVRTFTL True PC9_epitope_Rep4 1126.60225998074 1126.60116993586 79.602 2 0.1373294317530226 0.0007391625722857516 0.0040482400429388814 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 89030 21751 QVLEDFPTI True PC9_epitope_Rep5 1060.54407639828 1060.5429699358601 88.694 2 0.1373280423024112 0.0007391625722857516 0.0040483694047976455 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 92720 4591 RNVSTGDVNVE True NCI_RA007_Epitope_Rep3 1188.5734790335998 1188.5723899358602 24.955 2 0.1373140898078986 0.0007391625722857516 0.004049668649010319 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 137855 8551 YESLVHAVA True H1975_Epitope_Rep2 987.50254593947 987.50144993586 37.847 2 0.13731202570005138 0.0007391625722857516 0.0040498608919692074 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000434185.1_1_22:41195672-41215336:-|nuORF', 'ENST00000491545.5_1_22:41213372-41215336:-|nuORF'] 114232 6237 TPMGPGRTV True PC9_epitope_Rep5 914.46438660894 914.46328993586 28.97 2 0.13731178214054848 0.0007391625722857516 0.004049883576747391 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 48429 20766 IYVPVSLGF True PC9_epitope_Rep6 993.55351888317 993.55242993586 92.635 2 0.1373097041899715 0.0007391625722857516 0.004050077119155816 ['ENSG00000172818|ENST00000335987|OVOL1'] 100497 21373 SLAQYLINV True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 90.379 2 0.13730826965929052 0.0007391625722857516 0.004050210738126305 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 17396 10713 EHDPQYAVI True PC9_epitope_Rep6 1070.50327421546 1070.5021699358601 52.019 2 0.13730377743314348 0.0007391625722857516 0.004050629193521764 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 86628 6625 QLETLGQEK True PC9_epitope_Rep5 1044.5451390274397 1044.5440499358601 30.456 2 0.13729970488452184 0.0007391625722857516 0.0040510085924951944 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 125050 8867 VIDPVAPRY True H1975_Epitope_Rep2 1028.5654805492 1028.5643899358602 39.076 2 0.13729806645801784 0.0007391625722857516 0.004051161238362958 ['ENSG00000136628|ENST00000366923|EPRS1'] 136842 14684 YADGESFLGY True H1975_Epitope_Rep3 1120.4713053808398 1120.47020993586 61.853 2 0.1372971649199873 0.0007391625722857516 0.004051245233605281 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 139418 22006 YLPELLQTV True PC9_epitope_Rep2 1074.5961119711399 1074.5950099358602 90.119 2 0.13728762456284282 0.0007391625722857516 0.004052134203094128 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 92722 4930 RNVSTGDVNVE True NCI_RA007_Epitope_Rep4 1188.5734790335998 1188.5723899358602 25.426 2 0.1372793013402724 0.0007391625722857516 0.004052909917722505 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 79250 6037 PAPPPPPPP True NCI_RA007_Epitope_Rep5 865.46978925921 865.46868993586 29.903 2 0.13727344478066997 0.0007391625722857516 0.004053455830289299 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 9073 9874 AVIEAEHTL True PC9_epitope_Rep2 981.5131106231701 981.51200993586 43.315 2 0.13727185759890173 0.0007391625722857516 0.004053603790167052 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'ENST00000436565.2_1_13:77561342-77561690:+|nuORF'] 6000 11258 APILVPHTA True PC9_epitope_Rep5 917.5334521449299 917.53234993586 48.294 2 0.13725818394936934 0.0007391625722857516 0.0040548786931432655 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52'] 134224 21009 VYMDWYEKF True PC9_epitope_Rep5 1279.5583465634297 1279.5577749679298 85.868 1 0.13725534484627028 0.0007391625722857516 0.004055143455006166 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 139963 21366 YQDEVFGGF True PC9_epitope_Rep3 1060.4501760134397 1060.44906993586 87.483 2 0.13725038980429105 0.0007391625722857516 0.004055605580690567 ['ENSG00000145907|ENST00000356245|G3BP1'] 90866 8565 REVDPLRIPP True H1975_Epitope_Rep3 1190.6771562565 1190.6760499358602 37.935 2 0.13724687874095468 0.0007391625722857516 0.004055933067080437 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 32760 9319 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.46030993586 41.183 2 0.13724550095043303 0.0007391625722857516 0.00405606158448192 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 141986 21953 YVITDLTQL True PC9_epitope_Rep3 1064.57537652656 1064.57426993586 89.742 2 0.1372420940619585 0.0007391625722857516 0.00405637938916821 ['ENSG00000134070|ENST00000256458|IRAK2'] 54106 22235 KVLPGILFL True PC9_epitope_Rep1 998.6528390016199 998.65174993586 90.349 2 0.1372404691448332 0.0007391625722857516 0.0040565309749448185 ['ENSG00000104998|ENST00000263379|IL27RA'] 65781 7151 LSDGVAVLK True NCI_RA007_Epitope_Rep3 900.5280324113199 900.52692993586 35.246 2 0.13724043532738076 0.0007391625722857516 0.004056534129777417 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 107020 21023 SVFKDFYEL True PC9_epitope_Rep1 1146.55972646242 1146.5586299358602 85.693 2 0.13723272408525714 0.0007391625722857516 0.004057253575496274 ['ENSG00000100994|ENST00000216962|PYGB'] 60886 13632 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 57.291 2 0.13721886966673347 0.0007391625722857516 0.004058546486202527 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 104334 6990 SQIQEFKEA True PC9_epitope_Rep6 1078.5294889632999 1078.52838993586 35.863 2 0.13721367787390673 0.0007391625722857516 0.004059031095418504 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 43368 6398 IGAEVYHNLK True PC9_epitope_Rep6 1142.60840799034 1142.6067749037902 33.218 3 0.1372071925220724 0.0007391625722857516 0.0040596365276546675 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 49312 5194 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 25.051 2 0.13720296339961877 0.0007391625722857516 0.004060031380423649 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 26176 11613 FHDESTQVQL True PC9_epitope_Rep2 1202.5567663402999 1202.5556699358601 49.995 2 0.13719643293760478 0.0007391625722857516 0.004060641172794519 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 141818 20231 YVDDQLFVFY True H1975_Epitope_Rep1 1307.60740493083 1307.60630993586 84.166 2 0.1371956613662236 0.0007391625722857516 0.004060713225494628 ['nc|ENSG00000010704|Q30201-9|HFE', 'ENST00000486147.1_1_6:26087668-26093021:+|nuORF', 'ENST00000483782.1_1_6:26087668-26091517:+|nuORF', 'nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE'] 92143 20536 RLEEAFEFV True PC9_epitope_Rep5 1138.56587447202 1138.56476993586 84.035 2 0.13719247452000952 0.0007391625722857516 0.004061010840490524 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 9953 23794 AYNDNWFITF True PC9_epitope_Rep1 1289.57168812845 1289.5705899358602 96.321 2 0.1371918474697117 0.0007391625722857516 0.004061069402358624 ['ENSG00000107929|ENST00000316157|LARP4B'] 60894 13759 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 58.007 2 0.13718748629436783 0.0007391625722857516 0.004061476727046068 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 66381 11953 LSGHLETVILG True H1975_Epitope_Rep1 1137.63937376545 1137.63826993586 50.981 2 0.13718744142288616 0.0007391625722857516 0.004061480918158966 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 48250 13708 IYQKPFQTL True PC9_epitope_Rep2 1136.62299542532 1136.62188993586 58.018 2 0.1371856891776704 0.0007391625722857516 0.004061644585757471 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 86111 13671 QHVPGSPFSV True PC9_epitope_Rep4 1053.52434401321 1053.5232499358601 60.477 2 0.13718481167711186 0.0007391625722857516 0.004061726550715186 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 111104 14981 THEDGVLEL True PC9_epitope_Rep1 1011.48728979815 1011.48618993586 62.445 2 0.13717612097267526 0.0007391625722857516 0.004062538414302505 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 481 11867 AAMLDTVVFK True NCI_RA007_Epitope_Rep3 1093.58416738845 1093.58306993586 53.804 2 0.13717395833285628 0.0007391625722857516 0.004062740467575892 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 139023 6312 YLAEVASGEK True NCI_RA007_Epitope_Rep1 1065.5342399905699 1065.5331499358601 28.577 2 0.13716591732709804 0.0007391625722857516 0.0040634918178907 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 3902 16178 AHDDAIWSV True PC9_epitope_Rep2 1012.46140940348 1012.46030993586 67.481 2 0.1371628926300131 0.0007391625722857516 0.004063774480685301 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 6737 9049 AQASDLEKI True PC9_epitope_Rep4 973.50802524273 973.50692993586 42.382 2 0.13714989575462763 0.0007391625722857516 0.004064989280896097 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 88157 9567 QRVDSPVTV True PC9_epitope_Rep1 999.5349086969098 999.53380993586 41.658 2 0.137147917503011 0.0007391625722857516 0.0040651742168720416 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 109696 5420 TEDDPQEVSA True H1975_Epitope_Rep3 1089.44621283181 1089.44510993586 25.907 2 0.13714353164548243 0.0007391625722857516 0.00406558425649974 ['ENSG00000179409|ENST00000319004|GEMIN4'] 141378 8936 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43348993586 39.279 2 0.13714105948550442 0.0007391625722857516 0.004065815400038469 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 8991 9076 AVGLVLPAK True NCI_RA007_Epitope_Rep4 866.5589386167799 866.55784993586 41.745 2 0.1371405454384702 0.0007391625722857516 0.004065863464357652 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 54897 11406 KYPNVFKKI True PC9_epitope_Rep1 1135.67536535135 1135.67371490379 48.752 3 0.13713917580585794 0.0007391625722857516 0.004065991530205859 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 126011 19740 VLDSEGYLLFY True H1975_Epitope_Rep3 1317.6492697428098 1317.64816993586 82.662 2 0.13713875589994431 0.0007391625722857516 0.00406603079380186 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 113990 9679 TPALIALR True H1975_Epitope_Rep1 853.53853752537 853.53744993586 42.155 2 0.13713462830494055 0.0007391625722857516 0.004066416767421284 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 106923 7657 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4494699358602 34.434 2 0.1371340369002121 0.0007391625722857516 0.004066472072962494 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 131682 6274 VTNDGATILK True NCI_RA007_Epitope_Rep2 1030.56587447202 1030.56476993586 29.011 2 0.13713393920465025 0.0007391625722857516 0.004066481209088751 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 85467 19493 QFIDKPVCF True PC9_epitope_Rep1 1095.5423025764699 1095.54120993586 79.798 2 0.13713295834371603 0.0007391625722857516 0.004066572936687225 ['ENSG00000106399|ENST00000223129|RPA3', 'ENST00000462723.1_1_7:7678661-7680049:-|nuORF'] 104307 12066 SQIPAQPSV True PC9_epitope_Rep1 925.48689587533 925.48578993586 51.272 2 0.13713095109029882 0.0007391625722857516 0.004066760656257579 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 31474 7893 GEAPVPASV True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 35.306 1 0.13712042675396097 0.0007391625722857516 0.004067745038942238 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 33221 7923 GKDGYNYTL True NCI_RA007_Epitope_Rep4 1029.47672511445 1029.47562993586 37.22 2 0.13711850877675577 0.0007391625722857516 0.004067924460303133 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 21357 13089 ERFSTSQVL True PC9_epitope_Rep1 1065.54547338061 1065.54436993586 55.215 2 0.13711639239753473 0.0007391625722857516 0.004068122450697965 ['ENSG00000181481|ENST00000328381|RNF135'] 19446 6141 ELNITAAK True NCI_RA007_Epitope_Rep1 858.4810822188999 858.47998993586 27.924 2 0.13711500239819696 0.0007391625722857516 0.0040682524923702935 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 65334 13724 LRDENYYQL True PC9_epitope_Rep2 1212.57750178488 1212.57640993586 58.08 2 0.13711279003438998 0.0007391625722857516 0.004068459478999183 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'MACF1|p.S820Afs*39|1|0.14|ENSG00000127603|chr1:39297705-39297705|C/-|frameshift_variant', 'ENST00000484393.1_1_1:39751227-39753267:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 2096 9963 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 43.315 1 0.13711265152297797 0.0007391625722857516 0.0040684724383401065 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 26465 3508 FIDSDHTDNQR True NCI_RA007_Epitope_Rep2 1346.5851063464602 1346.5834649037902 18.297 3 0.1371117107006703 0.0007391625722857516 0.004068560464204023 ['ENSG00000185624|ENST00000331483|P4HB'] 105456 15881 SRVDLSNVL True PC9_epitope_Rep4 1001.5505587610501 1001.54946993586 69.017 2 0.1371103445906838 0.0007391625722857516 0.004068688284480011 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000196873|Q5JTY5-2|ZNG1C', 'ENST00000382436.3_9:42674366-42714533:+|nuORF', 'ENST00000456188.5_1_2:114214762-114253317:+|nuORF'] 138759 7013 YISSDGSY True H1975_Epitope_Rep3 890.3657776831401 890.3652249679301 31.94 1 0.1370988906157385 0.0007391625722857516 0.004069760133558713 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12', 'nc|ENSG00000164631|P17014-4|ZNF12', 'nc|ENSG00000164631|P17014-5|ZNF12'] 28147 21491 FRDFIPVVL True PC9_epitope_Rep2 1104.6331661861998 1104.63206993586 88.135 2 0.13709515408857226 0.0007391625722857516 0.004070109853652025 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 99529 14025 SIDSLQLGY True H1975_Epitope_Rep2 994.49712620586 994.4965749679301 59.097 1 0.1370904112212267 0.0007391625722857516 0.004070553804921875 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 76827 10181 NRAQIQAVI True PC9_epitope_Rep4 1011.58252759567 1011.58142993586 46.838 2 0.13708546560073281 0.0007391625722857516 0.004071016785707035 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 45674 17240 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6744449037901 71.132 3 0.13708282965727767 0.0007391625722857516 0.004071263568978647 ['ENSG00000136628|ENST00000366923|EPRS1'] 118506 16282 TYQDIQNTI True PC9_epitope_Rep1 1094.52440358286 1094.52387496793 67.447 1 0.13708141915687921 0.0007391625722857516 0.00407139562944528 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 139537 21556 YLTDLQVSL True PC9_epitope_Rep2 1050.55972646242 1050.55917496793 88.384 1 0.13707532758385466 0.0007391625722857516 0.004071966011856369 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 40667 12573 HRQEIQVVL True PC9_epitope_Rep5 1120.63529144452 1120.6341899358601 53.361 2 0.13707344080286454 0.0007391625722857516 0.00407214269599725 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 28174 7575 FRDQNPEQL True PC9_epitope_Rep6 1145.5465360097699 1145.54542993586 38.411 2 0.1370729780379427 0.0007391625722857516 0.004072186031926519 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 110617 16189 TFTFSHATF True PC9_epitope_Rep6 1057.4868958753298 1057.48578993586 74.625 2 0.13706383248643902 0.0007391625722857516 0.004073042566782782 ['ENSG00000204713|ENST00000377199|TRIM27'] 28469 12928 FSDPVYAEAY True H1975_Epitope_Rep2 1160.5026055091198 1160.50207496793 54.841 1 0.13706119402905653 0.0007391625722857516 0.004073289707002534 ['ENSG00000129083|ENST00000439561|COPB1'] 128065 11828 VPLAIVNKA True PC9_epitope_Rep1 923.58040233735 923.57930993586 50.362 2 0.13705809948188327 0.0007391625722857516 0.004073579587347215 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 21539 20602 ERNDLIVFL True PC9_epitope_Rep4 1117.6131590176099 1117.61206993586 87.4 2 0.1370538047320903 0.0007391625722857516 0.00407398192995503 ['ENSG00000129636|ENST00000320640|ITFG1'] 109750 4895 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 23.956 2 0.13704684857765176 0.0007391625722857516 0.00407463368281475 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 105578 7085 SSDKSGMIEY True H1975_Epitope_Rep2 1115.48049016555 1115.4793899358601 32.183 2 0.13704635219525318 0.0007391625722857516 0.0040746801950180015 ['ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 45306 18532 IPYHIVNIV True PC9_epitope_Rep4 1066.6175161220601 1066.61640993586 79.358 2 0.13704513358745055 0.0007391625722857516 0.004074794383674736 ['ENSG00000031698|ENST00000234677|SARS1'] 119582 11857 VATKIFQEL True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 52.588 2 0.1370409071622091 0.0007391625722857516 0.0040751904419528955 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 9110 18934 AVIPRLVQL True PC9_epitope_Rep4 1007.64915060351 1007.64804993586 80.917 2 0.13703893468120204 0.0007391625722857516 0.004075375296165036 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 110513 19528 TFITSGMRF True PC9_epitope_Rep5 1058.5219014850597 1058.5208099358601 80.166 2 0.13703847387941706 0.0007391625722857516 0.0040754184821363455 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 8865 22130 AVFPDDMPTL True PC9_epitope_Rep1 1104.51614739828 1104.5150499358601 89.936 2 0.13703482539418407 0.0007391625722857516 0.004075760431207549 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 75404 12539 NIVEKLREV True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 53.537 2 0.13703374352704722 0.0007391625722857516 0.004075861833115831 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 120363 11528 VEEGFSIQA True H1975_Epitope_Rep1 978.4658260775799 978.4652749679301 49.329 1 0.13703112224495234 0.0007391625722857516 0.004076107532603375 ['ENSG00000172409|ENST00000533682|CLP1'] 114733 18954 TQINVGNLEL True PC9_epitope_Rep6 1099.5873381925899 1099.58624993586 85.553 2 0.13702956512865308 0.0007391625722857516 0.004076253492039841 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'DDX17|p.S385C|1|0.27|ENSG00000100201|chr22:38494691-38494691|T/A|missense_variant'] 17374 18453 EHDLLQAAL True PC9_epitope_Rep1 1008.5240096600398 1008.52290993586 75.771 2 0.13701459771094346 0.0007391625722857516 0.004077656756817258 ['ENSG00000135686|ENST00000564996|KLHL36', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 2648 8387 AESLGQYAA True H1975_Epitope_Rep2 908.4239612655999 908.42286993586 37.213 2 0.13701438695064977 0.0007391625722857516 0.004077676519982598 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 108190 19823 SYGKINILL True PC9_epitope_Rep1 1019.60153170475 1019.60042993586 81.063 2 0.13701087681268054 0.0007391625722857516 0.004078005682423296 ['ENSG00000112249|ENST00000369162|ASCC3'] 105028 15582 SRDMTMFVT True PC9_epitope_Rep1 1086.48380172418 1086.4827099358602 64.758 2 0.13700983767852376 0.0007391625722857516 0.004078103132049163 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 99417 13041 SHYEEAMGL True PC9_epitope_Rep1 1035.43314605031 1035.43204993586 55.031 2 0.13700862840650935 0.0007391625722857516 0.0040782165400416685 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 109895 6283 TEFPAKAVA True H1975_Epitope_Rep2 932.4967322830398 932.49562993586 29.111 2 0.13700135058599539 0.0007391625722857516 0.004078899134753616 ['nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A'] 96203 12888 RYPSNLQLF True NCI_RA007_Epitope_Rep5 1136.59784330664 1136.59674993586 56.256 2 0.13699908985651985 0.0007391625722857516 0.004079111194035145 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 140258 18983 YRAPELLL True PC9_epitope_Rep5 973.5596668927699 973.55856993586 78.044 2 0.13699588022211934 0.0007391625722857516 0.004079412280528062 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 96964 9813 SAYDGKDYIA True PC9_epitope_Rep2 1101.49785448185 1101.4967499358602 43.082 2 0.13699123094367235 0.0007391625722857516 0.004079848454834113 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 97435 8161 SEEEISFRA True H1975_Epitope_Rep1 1066.49310345458 1066.49200993586 36.332 2 0.13697542672601515 0.0007391625722857516 0.004081331480079563 ['ENSG00000162928|ENST00000295030|PEX13'] 87861 11490 QRIAEENIM True PC9_epitope_Rep5 1102.54409348162 1102.54298993586 49.193 2 0.13697247500127402 0.0007391625722857516 0.004081608521068218 ['ENSG00000071859|ENST00000393600|FAM50A', 'ENST00000481619.5_1_X:153672624-153677371:+|nuORF'] 30318 7390 GAAKDLPGV True PC9_epitope_Rep4 826.4548674710599 826.45376993586 35.77 2 0.1369657974364398 0.0007391625722857516 0.004082235328077101 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 77824 15542 NVDFDAPLGY True H1975_Epitope_Rep2 1109.5029398622898 1109.5023749679299 64.937 1 0.13695903169795526 0.0007391625722857516 0.004082870508832804 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 30191 15025 FYQPKIQQF True PC9_epitope_Rep6 1197.61824439805 1197.6171499358602 69.818 2 0.13695264381522332 0.0007391625722857516 0.004083470305464058 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 133545 17684 VWSDVTPLTF True NCI_RA007_Epitope_Rep3 1163.58627556343 1163.5857749679299 77.545 1 0.13694861618559917 0.0007391625722857516 0.004083848528567109 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 76914 17798 NRDPILVSL True PC9_epitope_Rep2 1025.58694426977 1025.58584993586 73.752 2 0.1369411134856669 0.0007391625722857516 0.004084553177907504 ['ENSG00000106789|ENST00000375077|CORO2A'] 114825 19516 TQLNMFQTL True PC9_epitope_Rep6 1094.54303085246 1094.54192993586 87.732 2 0.13694068573387894 0.0007391625722857516 0.004084593355737018 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 24230 7124 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56899490379 32.411 3 0.13693994507358626 0.0007391625722857516 0.004084662925331349 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 4082 20308 AHMDIFQNL True PC9_epitope_Rep5 1087.5120650773501 1087.5109699358602 83.159 2 0.13692471961247907 0.0007391625722857516 0.0040860932996903375 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1'] 88273 12942 QSEIASM[Oxidation]LY True H1975_Epitope_Rep2 1056.47976227 1056.4786699358601 54.895 2 0.13691948728015133 0.0007391625722857516 0.004086584971845868 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 127298 7200 VMDDGTNEY True H1975_Epitope_Rep3 1042.39134080798 1042.39077496793 32.67 1 0.13691124374092908 0.0007391625722857516 0.004087359720008126 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 70418 11425 LVTTVTEIAG True H1975_Epitope_Rep1 1002.5597264624199 1002.55862993586 48.926 2 0.13690501634404692 0.0007391625722857516 0.004087945082453655 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 38269 5928 HEEIAM[Oxidation]ATVTA True H1975_Epitope_Rep1 1187.54923881215 1187.54814993586 27.874 2 0.13690229517528762 0.0007391625722857516 0.004088200892726213 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 53185 20578 KQDLVELYL True PC9_epitope_Rep5 1119.6175756917098 1119.61646993586 84.2 2 0.136893029360314 0.0007391625722857516 0.004089072067570391 ['ENSG00000160445|ENST00000291900|ZER1'] 11638 8793 DGLILTSR True H1975_Epitope_Rep3 873.49198125577 873.49088993586 38.828 2 0.1368924949451624 0.0007391625722857516 0.004089122319051063 ['ENSG00000116288|ENST00000338639|PARK7'] 118893 9671 VADGYPVRL True H1975_Epitope_Rep2 988.5341804209199 988.53308993586 42.18 2 0.1368916969808112 0.0007391625722857516 0.004089197353408893 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 100627 21345 SLDDLLTNV True PC9_epitope_Rep4 988.5076908895601 988.50658993586 90.272 2 0.13688299678328905 0.0007391625722857516 0.004090015540644407 ['ENSG00000143819|ENST00000272167|EPHX1'] 9703 17734 AYGHFSYEF True PC9_epitope_Rep2 1119.46616043075 1119.4650699358601 73.495 2 0.13687479923583298 0.0007391625722857516 0.004090786605617589 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 68040 11558 LTDLEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.53887496793 49.519 1 0.13687310054170718 0.0007391625722857516 0.004090946403526398 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 7487 9263 ASDDFDQASY True H1975_Epitope_Rep3 1117.4199980839699 1117.41947496793 40.622 1 0.13687082923908053 0.0007391625722857516 0.00409116007695325 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 29402 12504 FVDPSQDHAL True PC9_epitope_Rep5 1127.52473793603 1127.52364993586 53.095 2 0.1368700685271045 0.0007391625722857516 0.004091231643611513 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 76963 8026 NRDVPNETL True PC9_epitope_Rep5 1056.51998690876 1056.5188899358602 35.81 2 0.13686881165400966 0.0007391625722857516 0.004091349891087255 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.V235A|1|0.18|ENSG00000205339|chr11:9417126-9417126|T/C|missense_variant', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 48505 8225 KAINQGGLTSV True PC9_epitope_Rep2 1086.6033226099 1086.6022299358601 36.995 2 0.13686620071549307 0.0007391625722857516 0.004091595540762654 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 35132 16054 GQWASVIRV True PC9_epitope_Rep6 1014.5610638750999 1014.55996993586 74.075 2 0.13685866138531186 0.0007391625722857516 0.004092304959147348 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 66116 13336 LSELEAALQR True PC9_epitope_Rep6 1128.6138872935999 1128.61278993586 62.956 2 0.13685314619349617 0.0007391625722857516 0.004092823991900466 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 21856 10032 ESDDGVVVY True H1975_Epitope_Rep1 981.4291062156899 981.42855496793 43.527 1 0.13683647619758552 0.0007391625722857516 0.004094393195137137 ['ENSG00000137628|ENST00000393743|DDX60'] 42548 6939 IEESGEHIIA True H1975_Epitope_Rep2 1096.540053647 1096.53894993586 31.612 2 0.13683453834745093 0.0007391625722857516 0.0040945756501403665 ['ENSG00000167658|ENST00000309311|EEF2'] 115449 9589 TRM[Oxidation]PDGPVAL True PC9_epitope_Rep2 1071.53828020563 1071.5371899358602 42.229 2 0.13683312310404055 0.0007391625722857516 0.004094708905071504 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 77783 20318 NTTDIFQTV True PC9_epitope_Rep1 1037.50293986229 1037.50184993586 82.982 2 0.13682572428616424 0.0007391625722857516 0.0040954056246440065 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 60535 19256 LHDISSLL True PC9_epitope_Rep5 896.49673228304 896.49562993586 79.109 2 0.1368215928066478 0.0007391625722857516 0.004095794721943038 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 68324 16118 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.52277496793 67.341 1 0.13682087469701945 0.0007391625722857516 0.0040958623562913675 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 2307 6880 AEPAKIEAFR True PC9_epitope_Rep4 1130.6084079903399 1130.6067749037902 33.683 3 0.1368184679671035 0.0007391625722857516 0.004096089039497952 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 114789 19149 TQLGPPYHIL True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 78.45 2 0.13681771440042398 0.0007391625722857516 0.004096160018401138 ['ENSG00000119616|ENST00000341162|FCF1'] 10138 11682 AYVHMVTHF True PC9_epitope_Rep4 1103.52223583823 1103.52112993586 52.697 2 0.13681575396206147 0.0007391625722857516 0.004096344678979536 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 89746 12059 RAFPALTSL True NCI_RA007_Epitope_Rep3 974.5549158655 974.55380993586 54.556 2 0.1368150162888759 0.0007391625722857516 0.004096414165140799 ['ENSG00000170458|ENST00000302014|CD14'] 74867 13889 NHHLFTTTI True PC9_epitope_Rep3 1082.5508931142201 1082.5497899358602 58.503 2 0.13681419315425616 0.0007391625722857516 0.004096491702837883 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 101323 20844 SLINVGLISV True PC9_epitope_Rep6 1013.6120963884499 1013.61098993586 92.949 2 0.13681031150864145 0.0007391625722857516 0.00409685736594558 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 1832 12508 AEIDAHLVALA True H1975_Epitope_Rep1 1121.60807363717 1121.6069699358602 53.153 2 0.13681020929368173 0.0007391625722857516 0.004096866995349355 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 141402 13535 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep3 1147.5107280451098 1147.5096299358602 57.342 2 0.13679504949976407 0.0007391625722857516 0.004098295407712653 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 25367 9084 FEADPPGQVAA True H1975_Epitope_Rep2 1100.51383889916 1100.5132749679299 39.893 1 0.13679460546335287 0.0007391625722857516 0.00409833725390407 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 75143 15949 NHYNNIMAL True PC9_epitope_Rep5 1088.50731405008 1088.5062099358602 66.337 2 0.1367864699916096 0.0007391625722857516 0.004099104019222034 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 54329 14435 KYDPNVYSI True PC9_epitope_Rep3 1097.53932537101 1097.53822993586 60.629 2 0.13678525764782884 0.0007391625722857516 0.004099218294337209 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 23751 20574 EYGKFFVTL True PC9_epitope_Rep2 1102.5698972233 1102.5688099358601 84.57 2 0.13678395217325137 0.0007391625722857516 0.004099341351452643 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 33070 21084 GIMDRFLQV True PC9_epitope_Rep2 1077.5641006502099 1077.56300993586 86.557 2 0.13678082968896094 0.0007391625722857516 0.004099635699011972 ['ENSG00000157456|ENST00000288207|CCNB2'] 126881 14987 VLQLGNIVFK True NCI_RA007_Epitope_Rep1 1129.68593003505 1129.68482993586 62.36 2 0.13677615887724473 0.0007391625722857516 0.004100076041935116 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 44966 11534 IPAGTVTVNAA True PC9_epitope_Rep4 1012.55530978832 1012.55420993586 52.128 2 0.1367753440444544 0.0007391625722857516 0.00410015286546271 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 140085 21431 YQLEIPENFTT True PC9_epitope_Rep5 1353.6452469915296 1353.64414993586 87.497 2 0.13676638701146537 0.0007391625722857516 0.004100997440371841 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 23731 21050 EYFSYPVSL True PC9_epitope_Rep4 1103.51752729727 1103.51642993586 89.128 2 0.13676228345055907 0.0007391625722857516 0.004101384430045539 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 14684 13313 DVIEEYFK True NCI_RA007_Epitope_Rep5 1041.50187723313 1041.5007899358602 57.889 2 0.1367580662096689 0.0007391625722857516 0.004101782178031128 ['ENSG00000112306|ENST00000230050|RPS12'] 99262 10517 SHQGDYAVL True PC9_epitope_Rep5 988.4614094034798 988.46030993586 45.441 2 0.13675165895814237 0.0007391625722857516 0.004102386549307653 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT', 'AASDHPPT|p.Y174Ifs*11|1|0.09|ENSG00000149313|chr11:106090664-106090664|T/-|frameshift_variant'] 28067 19837 FQSSAVMAL True PC9_epitope_Rep5 952.4688032830398 952.46770993586 81.35 2 0.13675009454192505 0.0007391625722857516 0.0041025341280192165 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 33072 21408 GIMDRFLQV True PC9_epitope_Rep5 1077.5641006502099 1077.56300993586 87.41 2 0.1367491774066365 0.0007391625722857516 0.004102620648129154 ['ENSG00000157456|ENST00000288207|CCNB2'] 115544 6311 TRSITNTTV True PC9_epitope_Rep3 991.52982331647 991.52872993586 29.305 2 0.13674652365960524 0.0007391625722857516 0.004102871005747993 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 124759 18541 VHDEGVWAL True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 76.108 2 0.13674280489548907 0.0007391625722857516 0.004103221863752435 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 82665 21127 PQPDVFPLF True PC9_epitope_Rep6 1058.54368247546 1058.5431749679299 94.11 1 0.13674023243873012 0.0007391625722857516 0.004103464587296852 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 352 16812 AAIYLVTSL True H1975_Epitope_Rep2 949.54843350273 949.54732993586 69.915 2 0.1367362730697456 0.0007391625722857516 0.004103838200359076 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 41564 21666 HYTYILEVF True PC9_epitope_Rep5 1183.5913609438696 1183.59026993586 88.385 2 0.13672326302513635 0.0007391625722857516 0.004105066088069788 ['ENSG00000151012|ENST00000280612|SLC7A11'] 140291 9713 YRAQPSVSL True PC9_epitope_Rep4 1019.5399940773499 1019.53888993586 44.997 2 0.1367199589509703 0.0007391625722857516 0.004105377984358803 ['ENSG00000239306|ENST00000310137|RBM14'] 25388 15350 FEDDAIQLV True H1975_Epitope_Rep1 1048.50769088956 1048.5065899358601 64.312 2 0.1367172297701481 0.0007391625722857516 0.004105635629834981 ['ENSG00000085840|ENST00000371568|ORC1'] 32216 8688 GEYGFQNA True H1975_Epitope_Rep3 884.36644638948 884.3658949679301 38.417 1 0.1367164883200662 0.0007391625722857516 0.004105705628420605 ['CON__P02769'] 48900 4275 KEDKPPLAP True H1975_Epitope_Rep2 993.5494961318898 993.54838993586 21.558 2 0.13671278520858532 0.0007391625722857516 0.004106055248268707 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 137234 15892 YAYTGVLQL True H1975_Epitope_Rep3 1026.53859709502 1026.53807496793 66.576 1 0.13671142454585364 0.0007391625722857516 0.004106183719174469 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 100270 15094 SIYNGDMEKI True PC9_epitope_Rep3 1168.5434247752798 1168.5423299358602 63.195 2 0.13670992313564717 0.0007391625722857516 0.004106325483772939 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 115271 12304 TREGGSIPVTL True PC9_epitope_Rep6 1128.6138872935999 1128.61278993586 58.719 2 0.13670912899059864 0.0007391625722857516 0.0041064004696706935 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 15254 12513 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 53.225 2 0.1367071896430937 0.0007391625722857516 0.004106583595201159 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 87973 16134 QRMTTQLLL True PC9_epitope_Rep2 1102.6168644990598 1102.61576993586 67.317 2 0.13670125605727768 0.0007391625722857516 0.004107143932279995 ['ENSG00000110195|ENST00000393676|FOLR1'] 106746 16862 STYEGKPIFL True PC9_epitope_Rep2 1153.60192562757 1153.60082993586 70.107 2 0.13669983570184496 0.0007391625722857516 0.0041072780744974575 ['ANKEF1|p.K510Rfs*11|1|0.36|ENSG00000132623|chr20:10050094-10050094|A/-|frameshift_variant', 'ANKEF1|p.A631Cfs*6|1|0.37|ENSG00000132623|chr20:10053129-10053130|-/T|frameshift_variant', 'ENSG00000132623|ENST00000378392|ANKEF1'] 90833 9326 RETETVFVP True NCI_RA007_Epitope_Rep4 1076.5502244078798 1076.54912993586 42.729 2 0.13669761211179532 0.0007391625722857516 0.004107488085069943 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 115448 12581 TRMPDGPVAL True PC9_epitope_Rep6 1055.54336520563 1055.54226993586 59.835 2 0.13669758491939904 0.0007391625722857516 0.004107490653365685 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 28961 9626 FTDVDVDSIK True NCI_RA007_Epitope_Rep2 1137.5553693579698 1137.55426993586 42.057 2 0.13669133243192566 0.0007391625722857516 0.004108081236971901 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'ENST00000492816.6_1_2:216245477-216245942:-|nuORF'] 7481 9127 ASDDFDQASY True H1975_Epitope_Rep1 1117.4199980839699 1117.41947496793 40.012 1 0.13668953359982453 0.0007391625722857516 0.004108251162621908 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 1793 10926 AEHGIFLPP True H1975_Epitope_Rep2 979.51271670035 979.51160993586 47.06 2 0.1366884828812976 0.0007391625722857516 0.004108350421364798 ['ENSG00000159079|ENST00000290155|CFAP298'] 21862 11205 ESDEVELSY True H1975_Epitope_Rep1 1069.44515020265 1069.4445749679298 48.069 1 0.1366845088892207 0.0007391625722857516 0.004108725855871967 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 105023 14161 SRDLSSQLL True PC9_epitope_Rep1 1017.54547338061 1017.54436993586 59.292 2 0.1366817821305475 0.0007391625722857516 0.004108983480263275 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 28560 9845 FSERSNPFY True H1975_Epitope_Rep2 1145.51417325233 1145.5130699358601 42.855 2 0.13667657191584204 0.0007391625722857516 0.004109475786213519 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6', 'ENST00000556044.5_1_14:71060086-71067354:-|nuORF', 'ENST00000556423.1_1_14:71063310-71067354:-|nuORF', 'ENST00000553611.5_1_14:71060082-71067354:-|nuORF', 'ENST00000554870.5_1_14:71059985-71067354:-|nuORF', 'ENST00000556495.5_1_14:71059591-71067354:-|nuORF', 'nc|ENSG00000133997|O75586-3|MED6'] 8037 11567 ATDNLISDTSY True H1975_Epitope_Rep2 1198.53536218938 1198.53426993586 49.556 2 0.1366731922925409 0.0007391625722857516 0.004109795153311864 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 90883 5194 REVQGFESA True NCI_RA007_Epitope_Rep5 1021.4828731240499 1021.48176993586 26.674 2 0.136668259366654 0.0007391625722857516 0.004110261348203602 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 2161 5676 AELQSRLAA True NCI_RA007_Epitope_Rep3 957.5243440132099 957.52324993586 29.309 2 0.13666640597891233 0.0007391625722857516 0.004110436519406842 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 48869 8899 KEAIETIVAA True H1975_Epitope_Rep1 1043.5862755634298 1043.5851699358602 39.134 2 0.13665465170732333 0.0007391625722857516 0.004111547635239779 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 62928 17930 LLPDLIQKV True PC9_epitope_Rep6 1037.6484818971699 1037.64738993586 81.593 2 0.13665072867120215 0.0007391625722857516 0.004111918540784782 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 88679 7315 QTETHNVFY True H1975_Epitope_Rep2 1137.50908787189 1137.50798993586 33.077 2 0.13664985769106291 0.0007391625722857516 0.004112000892555343 ['nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1'] 78621 10430 NYSSAVQKF True PC9_epitope_Rep5 1042.5083595959 1042.5072699358602 45.106 2 0.13664898924823574 0.0007391625722857516 0.004112083006045083 ['OPHN1|p.K700Rfs*7|1|0.44|ENSG00000079482|chrX:68063915-68063915|G/-|frameshift_variant', 'ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 38952 10652 HHINDTDTIL True PC9_epitope_Rep5 1177.57275075761 1177.57164993586 45.96 2 0.136647040321517 0.0007391625722857516 0.004112267287951782 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 77119 6879 NRMLAQQAV True PC9_epitope_Rep4 1029.53894853153 1029.53784993586 33.68 2 0.13663097363018403 0.0007391625722857516 0.004113786794546839 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 49307 4692 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 23.142 2 0.13662940972491064 0.0007391625722857516 0.004113934730463975 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 44496 21656 ILLKDILSV True PC9_epitope_Rep3 1012.65323292444 1012.65212993586 88.599 2 0.1366291349395154 0.0007391625722857516 0.004113960724032693 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant', 'ATM|p.L210Wfs*20|1|0.12|ENSG00000149311|chr11:108244081-108244081|T/-|frameshift_variant', 'ATM|p.R250Sfs*3|1|0.24|ENSG00000149311|chr11:108244873-108244874|CG/-|frameshift_variant'] 35488 10567 GSLNWVPVTK True NCI_RA007_Epitope_Rep5 1099.6025943339098 1099.6014899358602 47.281 2 0.1366275399800392 0.0007391625722857516 0.004114111603849207 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE', 'chr1:206016145-206021049|372|16.44|0.89|4.2|-|ENST00000360218|CTSE,CTSE'] 54906 8439 KYPNVFKKI True PC9_epitope_Rep4 1135.67536535135 1135.67371490379 39.926 3 0.13662560624536327 0.0007391625722857516 0.00411429453842652 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 111300 12411 THMPSVVGV True PC9_epitope_Rep2 925.4691376362099 925.46804993586 53.046 2 0.13662393054742625 0.0007391625722857516 0.004114453068796013 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 35015 11165 GQTQYVTNV True PC9_epitope_Rep5 1008.4876241513199 1008.48652993586 47.932 2 0.1366088440399724 0.0007391625722857516 0.0041158806085444056 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 77230 13320 NRVSGGLEVL True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 56.509 2 0.13659926202882472 0.0007391625722857516 0.004116787547302076 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF'] 91920 12979 RKLMMILAM True NCI_RA007_Epitope_Rep4 1105.6173991763699 1105.61630993586 57.024 2 0.1365929320708434 0.0007391625722857516 0.004117386787137853 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 34091 19853 GLYEGLTWL True H1975_Epitope_Rep2 1050.53859709502 1050.53807496793 82.348 1 0.13659072382111626 0.0007391625722857516 0.004117595856400932 ['ENSG00000165527|ENST00000298316|ARF6'] 115043 13985 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 61.698 2 0.1365902618963123 0.0007391625722857516 0.004117639591132879 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 119899 19183 VDIVAINDPFI True H1975_Epitope_Rep3 1214.65468947642 1214.65358993586 80.438 2 0.13657993205567417 0.0007391625722857516 0.004118617733540664 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 31381 15184 GDSVIVVLR True PC9_epitope_Rep1 956.5654805492 956.56438993586 63.227 2 0.13657210477974452 0.0007391625722857516 0.004119359058722996 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 97689 16217 SEIDLVQIK True PC9_epitope_Rep1 1043.58627556343 1043.5851699358602 67.197 2 0.13657154569210456 0.0007391625722857516 0.004119412015238782 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 126287 5162 VLIAAHGNSLR True NCI_RA007_Epitope_Rep5 1149.66184054553 1149.66019490379 26.55 3 0.13657037228880872 0.0007391625722857516 0.004119523161630775 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 45380 3026 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 15.646 2 0.13656908418997396 0.0007391625722857516 0.004119645175557879 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 105262 21302 SRLEILNVL True PC9_epitope_Rep1 1055.63389446219 1055.63278993586 86.766 2 0.13656732092336513 0.0007391625722857516 0.004119812205090537 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 73599 12232 MVVQDGIVKA True PC9_epitope_Rep5 1058.57941636118 1058.57830993586 52.036 2 0.13656423133634304 0.0007391625722857516 0.004120104889556683 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 115711 8075 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.5853349679301 38.854 1 0.1365624297434486 0.0007391625722857516 0.004120275568540764 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 94863 4900 RSYHLQIVTK True NCI_RA007_Epitope_Rep5 1243.7037053575098 1243.70206490379 25.542 3 0.13656073614487244 0.0007391625722857516 0.004120436022753651 ['ENSG00000131203|ENST00000518237|IDO1'] 1477 13634 AEEIPLKILA True H1975_Epitope_Rep2 1095.6539612004299 1095.65286993586 57.581 2 0.13655960759747324 0.0007391625722857516 0.004120542946552847 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'IGF2BP2|p.A393Lfs*38|1|0.5|ENSG00000073792|chr3:185672565-185672565|G/-|frameshift_variant', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 7328 10128 ARPPGYEF True PC9_epitope_Rep2 935.45011644379 935.44900993586 44.295 2 0.13655065488772447 0.0007391625722857516 0.004121391264887426 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 65333 9470 LRDENVNVV True PC9_epitope_Rep5 1056.5563724174801 1056.55526993586 41.383 2 0.13654245727984973 0.0007391625722857516 0.00412216818463218 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 6168 9672 APNLQNQQV True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 42.06 2 0.13653869541675534 0.0007391625722857516 0.004122524759760136 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 108045 22121 SYADQMFLL True PC9_epitope_Rep4 1086.50558271458 1086.5044899358602 93.305 2 0.13653741672918304 0.0007391625722857516 0.004122645969463727 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 115189 8005 TRDPQVNAF True PC9_epitope_Rep4 1046.5145076054998 1046.5134099358602 38.241 2 0.13653431315164458 0.0007391625722857516 0.004122940179294169 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 73339 9721 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4684899358601 42.412 2 0.13653222267750104 0.0007391625722857516 0.0041231383616661755 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 9855 8839 AYLHTTTTF True NCI_RA007_Epitope_Rep4 1053.51311062317 1053.51200993586 40.808 2 0.13652885356300448 0.0007391625722857516 0.004123457782283991 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 90633 4381 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 21.972 3 0.13652804952476577 0.0007391625722857516 0.004123534015541963 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 114724 16557 TQILSVPKV True PC9_epitope_Rep3 983.6015317047498 983.60042993586 68.827 2 0.13652613794995352 0.0007391625722857516 0.004123715263233108 ['nc|ENSG00000120802|P42166|TMPO'] 101799 11479 SLPDLTTPLK True NCI_RA007_Epitope_Rep4 1083.61757569171 1083.61646993586 51.087 2 0.13650982532726705 0.0007391625722857516 0.004125262279733743 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 140007 5199 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54488490379 24.848 3 0.13650179883264016 0.0007391625722857516 0.004126023687370578 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 103983 20420 SQATDFGEALV True PC9_epitope_Rep1 1136.5349682665599 1136.5338699358601 83.358 2 0.13649686404937317 0.0007391625722857516 0.004126491878712459 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 2218 4649 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep2 1120.4971436696399 1120.4960499358601 22.981 2 0.13649475193957822 0.0007391625722857516 0.004126692282799091 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 87518 20876 QQHSILLLL True PC9_epitope_Rep2 1063.6389798426299 1063.6378899358601 85.742 2 0.13648541500376618 0.0007391625722857516 0.0041275783180012415 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 115781 8935 TSDETTLEY True H1975_Epitope_Rep1 1057.44515020265 1057.4440499358602 39.275 2 0.13648358751524953 0.0007391625722857516 0.004127751760840409 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 87214 13912 QPITPGPSI True PC9_epitope_Rep4 908.4967322830399 908.49562993586 61.415 2 0.13648335335458137 0.0007391625722857516 0.004127773985025413 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 73470 13863 MVAPVTGNDV True PC9_epitope_Rep5 1001.48518162317 1001.48408993586 58.344 2 0.1364819869675874 0.0007391625722857516 0.004127903671151003 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 32221 11198 GEYGKFFVT True H1975_Epitope_Rep2 1046.50729696674 1046.5061899358602 48.112 2 0.13648182985145066 0.0007391625722857516 0.004127918583570393 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 53321 9931 KQMDSNWTL True NCI_RA007_Epitope_Rep3 1121.51754438061 1121.51644993586 46.145 2 0.13648090941827967 0.0007391625722857516 0.004128005946039156 ['nc|ENSG00000108039|Q9NQW7-2|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7-4|XPNPEP1', 'ENSG00000108039|ENST00000502935|XPNPEP1', 'ENST00000475123.1_1_10:111651462-111667565:-|nuORF'] 115653 21991 TRWPGFYIL True PC9_epitope_Rep3 1151.6127650947897 1151.6116699358602 89.888 2 0.1364806803645461 0.0007391625722857516 0.0041280276868474386 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF', 'ENST00000588721.1_1_17:75208810-75210102:+|nuORF'] 34722 6528 GQEDHYNNL True PC9_epitope_Rep3 1088.45230127176 1088.45120993586 30.137 2 0.13648037995552195 0.0007391625722857516 0.004128056200568678 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 78415 18821 NYLPQISHL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 77.407 2 0.13646970836327413 0.0007391625722857516 0.00412906923524849 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 90706 4524 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 22.513 2 0.13646956129410295 0.0007391625722857516 0.004129083197972092 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 21192 10127 ERDMSNVSL True PC9_epitope_Rep2 1049.48115887189 1049.48006993586 44.291 2 0.13646889406204396 0.0007391625722857516 0.004129146545463459 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 64768 9482 LQAETSQQL True PC9_epitope_Rep2 1016.51383889916 1016.51274993586 41.814 2 0.13646168303887085 0.0007391625722857516 0.004129831226499236 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 54715 15115 KYMDINFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 66.955 2 0.13645842163904778 0.0007391625722857516 0.0041301409307370526 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 40752 18468 HRTEMDWVL True PC9_epitope_Rep1 1185.5600778989299 1185.5589899358602 75.829 2 0.13645471131021772 0.0007391625722857516 0.004130493293430951 ['ENSG00000169813|ENST00000682386|HNRNPF'] 134410 17475 VYPGYYLTF True NCI_RA007_Epitope_Rep3 1121.54334812229 1121.5422499358601 76.668 2 0.13645299330273822 0.0007391625722857516 0.004130656459318522 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 77368 12239 NSELSCQLY True H1975_Epitope_Rep1 1055.4593607981499 1055.45877496793 52.099 1 0.1364484741860898 0.0007391625722857516 0.004131085687925246 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 40331 13198 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 55.803 2 0.1364477472963726 0.0007391625722857516 0.004131154732495172 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 85515 4433 QGAGALVHSE True NCI_RA007_Epitope_Rep4 967.47230844035 967.47120993586 23.415 2 0.13644769378883917 0.0007391625722857516 0.004131159815023261 ['ENST00000530120.5_1_1:201453843-201476204:-|nuORF', 'ENSG00000159176|ENST00000340006|CSRP1', 'ENST00000527662.5_1_1:201453843-201459740:-|nuORF'] 44298 17324 ILDEFLQTY True H1975_Epitope_Rep2 1140.5702911461199 1140.56918993586 71.93 2 0.13643672690975073 0.0007391625722857516 0.004132201658108841 ['ENSG00000161956|ENST00000321337|SENP3', 'ENST00000580997.1_1_17:7468099-7469096:+|nuORF', 'ENST00000583277.1_1_17:7467715-7468388:+|nuORF'] 3928 11380 AHDDSVM[Oxidation]YL True PC9_epitope_Rep5 1065.44371111445 1065.4426099358602 48.77 2 0.13643577400781262 0.0007391625722857516 0.004132292195152368 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 40190 11619 HQFESSFEL True NCI_RA007_Epitope_Rep4 1122.4981888350198 1122.49708993586 51.646 2 0.13643484846494228 0.0007391625722857516 0.0041323801346359185 ['ENSG00000197442|ENST00000359015|MAP3K5'] 125921 18774 VLDDIQDLIY True H1975_Epitope_Rep2 1205.61796961453 1205.6168699358602 77.946 2 0.13643482077644067 0.0007391625722857516 0.004132382765458319 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF', 'MIA3|p.T1568Lfs*50|1|0.04|ENSG00000154305|chr1:222658815-222658816|-/CTGTCCTTTAGGAT|frameshift_variant'] 108040 23120 SYADQMFLL True PC9_epitope_Rep1 1086.50558271458 1086.5044899358602 93.725 2 0.13643250448737082 0.0007391625722857516 0.004132602853479277 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 140979 16224 YSGLLLPDAQY True H1975_Epitope_Rep2 1238.6183039676998 1238.61720993586 67.616 2 0.13642840983713952 0.0007391625722857516 0.004132991945302506 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 11774 11342 DHDITSQL True PC9_epitope_Rep3 927.42977492203 927.42866993586 48.632 2 0.13642676520680394 0.0007391625722857516 0.004133148235565527 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 49948 16848 KILQELPSV True PC9_epitope_Rep2 1025.6120963884498 1025.61098993586 70.053 2 0.13642585656546782 0.0007391625722857516 0.0041332345868335205 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 8959 19660 AVGELLQEV True PC9_epitope_Rep4 956.51786165044 956.51676993586 83.74 2 0.13642118090764685 0.0007391625722857516 0.004133678958659552 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 118401 14860 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 61.979 2 0.1364166979422411 0.0007391625722857516 0.004134105061464337 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 57430 6411 LEATPDTPA True H1975_Epitope_Rep2 913.4392769765699 913.43872496793 29.583 1 0.1364079949650249 0.0007391625722857516 0.004134932397502488 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP', 'PFKL|p.V335M|1|0.61|ENSG00000141959|chr21:44318536-44318536|G/A|missense_variant', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 97535 9001 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 39.618 1 0.13640149965584814 0.0007391625722857516 0.004135549971421107 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 142582 19030 YYLSKIEEL True PC9_epitope_Rep2 1156.6015912743999 1156.6004899358602 78.563 2 0.13639915122665228 0.0007391625722857516 0.004135773282486587 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 10004 16459 AYQHLFYLL True NCI_RA007_Epitope_Rep5 1166.6124307416198 1166.61132993586 70.069 2 0.13639427387182892 0.0007391625722857516 0.004136237106033137 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 104253 10509 SQIDPSSIERA True PC9_epitope_Rep4 1201.5938801250102 1201.59278993586 48.146 2 0.1363940682873824 0.0007391625722857516 0.004136256657699887 ['ENSG00000100393|ENST00000263253|EP300'] 99355 16564 SHTDVVPVF True PC9_epitope_Rep1 999.50254593947 999.50144993586 68.536 2 0.13638876546116166 0.0007391625722857516 0.004136761003161564 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 62732 11170 LLLPGELAK True H1975_Epitope_Rep1 952.5957180483199 952.59462993586 47.933 2 0.13638102350216338 0.0007391625722857516 0.004137497440806931 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 126283 4937 VLIAAHGNSLR True NCI_RA007_Epitope_Rep3 1149.66184054553 1149.66019490379 26.413 3 0.13638096453794332 0.0007391625722857516 0.004137503050152271 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 101358 22215 SLITRLLEV True PC9_epitope_Rep3 1042.63864548946 1042.63754993586 90.736 2 0.13637804289639405 0.0007391625722857516 0.0041377809992475005 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 77607 6649 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 30.53 2 0.13637668699832492 0.0007391625722857516 0.004137909998290765 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 1577 9184 AEEVWARVA True H1975_Epitope_Rep1 1029.5243440132097 1029.5232499358601 40.233 2 0.13637384052969068 0.0007391625722857516 0.004138180821944592 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 25745 10877 FESVSHLI True H1975_Epitope_Rep3 930.4810822188999 930.47998993586 46.921 2 0.1363606012224805 0.0007391625722857516 0.004139440689386406 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 27174 21126 FLLGPRLVLA True PC9_epitope_Rep2 1097.6961007959299 1097.69500993586 86.72 2 0.13635776422916798 0.0007391625722857516 0.004139710710209745 ['ENSG00000170348|ENST00000303575|TMED10'] 3984 14815 AHDVDPIEL True PC9_epitope_Rep2 1007.4923751785899 1007.49126993586 62.249 2 0.13635678338012341 0.0007391625722857516 0.00413980407002066 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 91931 8181 RKLVAEVSL True NCI_RA007_Epitope_Rep4 1013.6233297784898 1013.62222993586 38.255 2 0.13634735378528048 0.0007391625722857516 0.00414070171004751 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 138307 12928 YHDIAQQAF True PC9_epitope_Rep1 1091.50360856863 1091.5025099358602 54.599 2 0.13633447061911275 0.0007391625722857516 0.0041419284200927 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 54558 4627 KYISKPENL True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 25.119 2 0.13633406499531975 0.0007391625722857516 0.004141967048635584 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 28430 12583 FSDDSDLQL True NCI_RA007_Epitope_Rep3 1038.4505699362599 1038.4494699358602 56.735 2 0.13633011581569462 0.0007391625722857516 0.004142343157255769 ['ENSG00000025800|ENST00000373625|KPNA6'] 1629 13767 AEFPHSFLV True NCI_RA007_Epitope_Rep4 1045.52328138405 1045.52218993586 60.18 2 0.13632951159044646 0.0007391625722857516 0.004142400704925626 ['ENST00000464083.5_1_6:36982408-36995936:+|nuORF', 'ENST00000494343.5_1_6:36981367-36995936:+|nuORF', 'ENSG00000146192|ENST00000274963|FGD2', 'nc|ENSG00000146192|Q7Z6J4-4|FGD2', 'ENST00000493635.1_1_6:36982749-36990230:+|nuORF'] 72050 18880 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.5514299358601 79.19 2 0.1363173311851335 0.0007391625722857516 0.00414356096064964 ['ENSG00000198712|ENST00000361739|MT-CO2'] 72023 8162 METDPQTISA True H1975_Epitope_Rep2 1091.48049016555 1091.4793899358601 36.345 2 0.13631491348229322 0.0007391625722857516 0.004143791299371856 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 95616 8041 RYALIMHKL True NCI_RA007_Epitope_Rep4 1143.65866974139 1143.65701490379 37.696 3 0.13631215095970126 0.0007391625722857516 0.004144054505162525 ['ENSG00000066422|ENST00000312938|ZBTB11'] 96650 8702 SAINEVVTR True PC9_epitope_Rep3 987.53490869691 987.53380993586 38.42 2 0.13631210780832367 0.0007391625722857516 0.004144058616641889 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 53186 10964 KQDSAFSNL True PC9_epitope_Rep1 1008.48762415132 1008.48652993586 47.061 2 0.13630027956169474 0.0007391625722857516 0.004145185768463613 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 121835 10293 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 47.559 2 0.13629774585185653 0.0007391625722857516 0.004145427253269328 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 18882 12089 ELDTPINY True H1975_Epitope_Rep2 963.4549270407099 963.45382993586 51.583 2 0.13629655968051974 0.0007391625722857516 0.004145540310597554 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 46630 16746 ITDIQIPLDY True H1975_Epitope_Rep1 1189.6230549949698 1189.6219499358601 69.811 2 0.13629457328751546 0.0007391625722857516 0.004145729646131502 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 29674 18816 FVLGHFILL True H1975_Epitope_Rep2 1057.63243791021 1057.63134993586 78.129 2 0.13628403510199538 0.0007391625722857516 0.0041467342494549515 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 31531 13415 GEDPITFAP True H1975_Epitope_Rep2 945.4443623570099 945.44326993586 56.736 2 0.1362706550521117 0.0007732955277741977 0.00414801011396546 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12', 'ENST00000481154.1_1_7:77214868-77221624:+|nuORF', 'ENST00000494248.1_1_7:77214868-77230160:+|nuORF', 'PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion'] 65775 13294 LSDGLNSLTY True H1975_Epitope_Rep2 1081.52915461013 1081.52857496793 56.265 1 0.13627024456180675 0.0007732955277741977 0.004148049262705816 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 110611 18750 TFTFSHATF True PC9_epitope_Rep3 1057.4868958753298 1057.48578993586 77.343 2 0.13626275786340988 0.0007732955277741977 0.004148763338323916 ['ENSG00000204713|ENST00000377199|TRIM27'] 89034 21523 QVLEELTEL True PC9_epitope_Rep2 1072.5652057656798 1072.5641099358602 88.256 2 0.13625063935416024 0.0007732955277741977 0.004149919450112237 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT2|p.R386W|1|0.28|ENSG00000131459|chr5:180316458-180316458|G/A|missense_variant', 'ENSG00000131459|ENST00000253778|GFPT2'] 141061 10170 YSNKEIFL True H1975_Epitope_Rep1 1012.5229470308799 1012.52184993586 44.058 2 0.13624092545656283 0.0007732955277741977 0.004150846390715389 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 99489 6959 SIDDLEEK True PC9_epitope_Rep2 947.44475627983 947.44364993586 32.165 2 0.13623973919932966 0.0007732955277741977 0.004150959602348643 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 40274 17801 HQLESILAM True PC9_epitope_Rep4 1040.5324661687598 1040.53136993586 76.503 2 0.13623691650628902 0.0007732955277741977 0.004151229001126359 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 8578 14798 ATVPGLLKV True PC9_epitope_Rep6 896.5695033004799 896.56840993586 68.89 2 0.1362308281026326 0.0007732955277741977 0.004151810139277474 ['ENSG00000179820|ENST00000391770|MYADM'] 29675 18904 FVLGHFILL True H1975_Epitope_Rep2 1057.63243791021 1057.63134993586 78.476 2 0.13622794005876507 0.0007732955277741977 0.004152085831197165 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 5544 11747 AMLDTVVFK True NCI_RA007_Epitope_Rep3 1022.54705360374 1022.54594993586 53.318 2 0.13622211191533865 0.0007732955277741977 0.004152642239370864 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 45151 23054 IPNSIMTILEA True PC9_epitope_Rep3 1200.6424105405601 1200.6413099358601 93.944 2 0.13622192902936292 0.0007732955277741977 0.004152659700540867 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 136840 14660 YADGESFLGY True H1975_Epitope_Rep3 1120.4713053808398 1120.4707749679299 61.757 1 0.13621721770118841 0.0007732955277741977 0.004153109543004304 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 36704 18160 GVISKTFQL True PC9_epitope_Rep5 991.57023157647 991.56912993586 74.861 2 0.13621079708583003 0.0007732955277741977 0.004153722667526139 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 124763 18545 VHDEGVWAL True PC9_epitope_Rep3 1024.4977949121999 1024.49668993586 76.553 2 0.1362043359538776 0.0007732955277741977 0.004154339751431397 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 115419 18968 TRLPIDVQL True PC9_epitope_Rep4 1053.61824439805 1053.6171499358602 81.05 2 0.13620419427663893 0.0007732955277741977 0.004154353283627391 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 55027 20806 KYSDITIMF True PC9_epitope_Rep1 1116.5525329069999 1116.5514299358601 84.856 2 0.1362026255577787 0.0007732955277741977 0.0041545031215540216 ['nc|ENSG00000130005|Q14353-2|GAMT', 'ENSG00000130005|ENST00000252288|GAMT'] 101331 19421 SLIRNLEQL True PC9_epitope_Rep2 1084.62405805448 1084.62296993586 80.08 2 0.1362001401255696 0.0007732955277741977 0.004154740531313286 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 44022 18713 IIIDSVPEV True PC9_epitope_Rep6 983.55391280599 983.55280993586 84.622 2 0.13619686022063673 0.0007732955277741977 0.004155053850041665 ['nc|ENSG00000174306|Q9H4I2-2|ZHX3', 'ENSG00000174306|ENST00000683867|ZHX3'] 141908 5449 YVEGVHQQY True H1975_Epitope_Rep2 1121.51417325233 1121.5130699358601 25.986 2 0.13619353707192158 0.0007732955277741977 0.004155371323530223 ['ENSG00000062716|ENST00000262291|VMP1'] 77251 15918 NRYEDALVL True PC9_epitope_Rep4 1091.56112344475 1091.56002993586 69.155 2 0.13618559526555551 0.0007732955277741977 0.004156130132712333 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 70107 14897 LVPEFVHNV True PC9_epitope_Rep6 1052.5654805492 1052.5643899358602 69.292 2 0.13618381959471262 0.0007732955277741977 0.00415629980999662 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant'] 77600 6806 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 31.097 2 0.13618111355680745 0.0007732955277741977 0.004156558403276846 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 75049 7859 NHSNQFTQL True PC9_epitope_Rep6 1087.50467119779 1087.50356993586 39.632 2 0.13617304041547723 0.0007732955277741977 0.004157329979992079 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A'] 104769 15431 SQWDSPMRV True PC9_epitope_Rep3 1104.5022286696399 1104.50112993586 64.509 2 0.13616966086679752 0.0007732955277741977 0.004157653016632362 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 17905 7918 EIAEAYLGK True H1975_Epitope_Rep1 992.5178616504398 992.51676993586 35.407 2 0.13616599848648825 0.0007732955277741977 0.004158003115956041 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 62379 19619 LLGPRLVLA True PC9_epitope_Rep3 950.6276868829399 950.62658993586 80.702 2 0.13616272008389418 0.0007732955277741977 0.00415831653426997 ['ENSG00000170348|ENST00000303575|TMED10'] 52833 12328 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 52.277 2 0.13615922417904916 0.0007732955277741977 0.004158650771728584 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 105138 17974 SRFLANEVL True PC9_epitope_Rep3 1047.57129420563 1047.57018993586 74.341 2 0.13615743202208105 0.0007732955277741977 0.004158822127075172 ['ENSG00000166483|ENST00000450114|WEE1', 'nc|ENSG00000166483|P30291-2|WEE1'] 120627 16558 VEIDPSMLEVA True H1975_Epitope_Rep2 1201.5900406145302 1201.58894993586 68.916 2 0.13615401218400602 0.0007732955277741977 0.004159149130935566 ['nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13', 'nc|ENSG00000010165|Q8N6R0-1|METTL13', 'nc|ENSG00000010165|Q8N6R0-3|METTL13', 'nc|ENSG00000010165|Q8N6R0-2|METTL13'] 140184 9189 YQTEKGITV True PC9_epitope_Rep3 1037.5393253710097 1037.53822993586 40.284 2 0.1361531509991942 0.0007732955277741977 0.004159231481167271 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 92821 12730 RPAQPTLWTA True PC9_epitope_Rep4 1139.60874234351 1139.60764993586 56.82 2 0.1361526218644922 0.0007732955277741977 0.004159282080124827 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 10056 11945 AYSRVQYQF True PC9_epitope_Rep4 1160.5614577979202 1160.56036993586 53.735 2 0.13615066415597465 0.0007732955277741977 0.004159469292963369 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 74180 8331 NEEIVPQIK True H1975_Epitope_Rep3 1068.5815245361598 1068.5804299358601 37.03 2 0.1361498007753784 0.0007732955277741977 0.004159551859449855 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'PGAM4|p.E177Q|1|0.11|ENSG00000226784|chrX:77969110-77969110|C/G|missense_variant', 'ENST00000397343.2_1_3:9390585-9390873:+|nuORF', 'ENSG00000226784|ENST00000458128|PGAM4'] 77371 12396 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45877496793 52.766 1 0.13613579012980273 0.0007732955277741977 0.004160891946693256 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 68059 11869 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48127496793 50.804 1 0.13612556122782066 0.0007732955277741977 0.004161870588050276 ['ENSG00000174231|ENST00000304992|PRPF8'] 90487 7063 RELEDDARVIA True H1975_Epitope_Rep3 1285.6626283911698 1285.66152993586 32.134 2 0.1361246966503623 0.0007732955277741977 0.004161953316179069 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 54713 16001 KYMDINFDF True NCI_RA007_Epitope_Rep1 1191.52704643515 1191.5259499358601 66.344 2 0.13612115606532613 0.0007732955277741977 0.0041622921182544485 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 44982 12221 IPAPPLSKV True PC9_epitope_Rep4 920.56950330048 920.56840993586 54.828 2 0.13611860711959198 0.0007732955277741977 0.004162536046264896 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.L27M|1|0.25|ENSG00000148346|chr9:128149604-128149604|C/A|missense_variant'] 74948 20134 NHMAVAFVL True PC9_epitope_Rep1 1000.5164221818 1000.51532993586 82.276 2 0.13611808430433373 0.0007732955277741977 0.004162586080181081 ['ENSG00000164919|ENST00000520468|COX6C'] 8120 13862 ATEEAPYWTY True H1975_Epitope_Rep2 1229.5240692296898 1229.52347496793 58.465 1 0.13611654756400784 0.0007732955277741977 0.004162733151129957 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 65007 8613 LQIDNARLA True H1975_Epitope_Rep2 1012.5665431783599 1012.56544993586 38.086 2 0.13611634513760654 0.0007732955277741977 0.004162752524364823 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 104919 17381 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.4909699358602 71.856 2 0.13611558999003098 0.0007732955277741977 0.004162824796610116 ['ENSG00000113387|ENST00000265073|SUB1'] 78245 12509 NYGRVFSEW True NCI_RA007_Epitope_Rep4 1156.53015766964 1156.5290699358602 55.131 2 0.13611299920667663 0.0007732955277741977 0.004163072759862909 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 100393 11717 SKVSILESL True NCI_RA007_Epitope_Rep3 974.56481184286 974.56370993586 53.202 2 0.1361108712486556 0.0007732955277741977 0.0041632764371349095 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 116550 18418 TTVDHFWGL True PC9_epitope_Rep6 1074.51344497634 1074.5123499358601 83.49 2 0.13610989161595108 0.0007732955277741977 0.004163370205884408 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'SUN1|p.D153Y|1|0.2|ENSG00000164828|chr7:843211-843211|G/T|missense_variant', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.E401Kfs*45|1|0.12|ENSG00000164828|chr7:853555-853555|G/-|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 75289 21802 NIIPYITNV True PC9_epitope_Rep5 1045.58079626017 1045.5796899358602 88.893 2 0.1361028507990048 0.0007732955277741977 0.004164044202138175 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 132699 14286 VVHDGFEGL True PC9_epitope_Rep3 971.47124581119 971.47014993586 60.039 2 0.13610216427669714 0.0007732955277741977 0.004164109926626832 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 87969 19355 QRMDILDVL True PC9_epitope_Rep6 1101.5852300176098 1101.5841299358601 87.097 2 0.13610198195717021 0.0007732955277741977 0.004164127381232243 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 16283 13463 EEFPSFGA True H1975_Epitope_Rep1 882.3759484440199 882.3753949679301 56.903 1 0.1360972019221344 0.0007732955277741977 0.004164585030127635 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 131631 7445 VTLSWKPVQK True NCI_RA007_Epitope_Rep3 1184.6917436914798 1184.69008490379 36.406 3 0.136096871410404 0.0007732955277741977 0.004164616675735046 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 99032 5911 SHEEIAM[Oxidation]ATVT True NCI_RA007_Epitope_Rep2 1203.54415343171 1203.5430499358602 27.609 2 0.13609037958462544 0.0007732955277741977 0.00416523829874473 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 137459 14036 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.47002496793 59.141 1 0.13608900877547486 0.0007732955277741977 0.00416536957192921 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 98347 5954 SEYIHAQVA True NCI_RA007_Epitope_Rep3 1016.4927095317598 1016.49160993586 30.401 2 0.13608827191762188 0.0007732955277741977 0.004165440137546183 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 75381 18643 NITDKGIIAL True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 76.735 2 0.1360849975125719 0.0007732955277741977 0.004165753727125862 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 67985 15542 LTDFDIRFY True H1975_Epitope_Rep1 1188.5815245361598 1188.5804299358601 65.061 2 0.13607814746341423 0.0007732955277741977 0.004166409831407501 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 44313 14429 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep3 1067.5208988059899 1067.5198099358602 60.856 2 0.13607806374737788 0.0007732955277741977 0.0041664178504415535 ['ENSG00000138160|ENST00000260731|KIF11'] 346 20844 AAIPIQINV True PC9_epitope_Rep2 937.55966689277 937.55856993586 85.622 2 0.13607601597411123 0.0007732955277741977 0.004166614008334241 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 38848 4684 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 24.552 2 0.13606859195532725 0.0007732955277741977 0.0041673252377682195 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 27783 20471 FQAEIAQLM True PC9_epitope_Rep4 1049.52156713189 1049.52046993586 86.888 2 0.1360674414296829 0.0007732955277741977 0.004167435470171257 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 118433 18375 TYPENWRAF True PC9_epitope_Rep1 1182.5458077337798 1182.54470993586 75.471 2 0.1360663757720739 0.0007732955277741977 0.004167537573899017 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 106847 6873 SVASPFTSK True NCI_RA007_Epitope_Rep2 922.4759968384601 922.47488993586 31.35 2 0.13606630224470495 0.0007732955277741977 0.004167544618859399 ['ENSG00000187527|ENST00000342358|ATP13A5', 'ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4'] 141875 20719 YVDPVITSI True PC9_epitope_Rep3 1005.53826274185 1005.53767496793 84.969 1 0.13606113292467903 0.0007732955277741977 0.00416803994223185 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 106916 7536 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4494699358602 33.938 2 0.1360587964314029 0.0007732955277741977 0.004168263843717716 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 99041 13344 SHFEGLITT True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 59.228 2 0.1360559623403427 0.0007732955277741977 0.004168535444962065 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 6520 6012 APTGDLPRA True PC9_epitope_Rep4 896.4715801643599 896.47048993586 30.101 2 0.1360549168319889 0.0007732955277741977 0.00416863564424345 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 38805 10200 HGYGFDQAL True NCI_RA007_Epitope_Rep5 1006.4508447197799 1006.44974993586 45.867 2 0.13605376441828906 0.0007732955277741977 0.004168746091862487 ['nc|ENSG00000020129|Q9UBB6-2|NCDN', 'ENSG00000020129|ENST00000373243|NCDN'] 99433 19791 SIAGIFKEV True PC9_epitope_Rep1 962.54368247546 962.54258993586 80.947 2 0.13604919369301213 0.0007732955277741977 0.004169184179810923 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 48242 10160 IYQKAFEHL True PC9_epitope_Rep2 1147.6025943339098 1147.60093490379 44.418 3 0.13604865640565458 0.0007732955277741977 0.004169235679904109 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 94787 5403 RSNPYYIVK True NCI_RA007_Epitope_Rep5 1138.61349337078 1138.6118549037901 27.471 3 0.13604442913638326 0.0007732955277741977 0.004169640894254539 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 117708 18049 TVVAAIQAV True PC9_epitope_Rep5 870.51746772762 870.51636993586 74.44 2 0.1360417015360993 0.0007732955277741977 0.004169902375142384 ['nc|ENSG00000170265|Q9UDV7-2|ZNF282', 'ENSG00000170265|ENST00000610704|ZNF282', 'ZNF282|p.E109K|1|0.09|ENSG00000170265|chr7:149198492-149198492|G/A|missense_variant'] 8089 10459 ATDVNDALGY True H1975_Epitope_Rep3 1037.4665543535698 1037.46597496793 45.293 1 0.13603836716983486 0.0007732955277741977 0.0041702220455541944 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 47947 23533 IYILDPELL True PC9_epitope_Rep1 1087.61651306255 1087.61540993586 95.309 2 0.1360285191037127 0.0007732955277741977 0.004171166335016596 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 714 15932 AAVEWFDGK True PC9_epitope_Rep3 1021.4868958753298 1021.48578993586 66.429 2 0.13602817995823988 0.0007732955277741977 0.004171198858007659 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 112500 15634 TLDPQTGLFY True H1975_Epitope_Rep2 1153.5655401188499 1153.5649749679299 65.29 1 0.1360280414484596 0.0007732955277741977 0.004171212140734848 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 132524 10893 VVDPNDPQM True PC9_epitope_Rep3 1013.44879611445 1013.44768993586 46.883 2 0.13602463327150266 0.0007732955277741977 0.004171538989199848 ['ENSG00000151883|ENST00000281631|PARP8'] 29886 18615 FVVDEVHLI True PC9_epitope_Rep6 1069.5807962601698 1069.5796899358602 84.245 2 0.1360239718253365 0.0007732955277741977 0.004171602425653896 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 85031 12752 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.53750993586 54.111 2 0.13602276076730468 0.0007732955277741977 0.004171718575486846 ['ENSG00000139233|ENST00000266604|LLPH'] 78577 20632 NYQVQFVTL True PC9_epitope_Rep4 1110.57095985246 1110.5698699358602 87.518 2 0.1360203530388751 0.0007732955277741977 0.004171949504762279 ['ENSG00000125484|ENST00000372146|GTF3C4'] 105605 12737 SSDNYEHWLY True H1975_Epitope_Rep2 1312.53603089572 1312.5349299358602 54.095 2 0.13601953625610763 0.0007732955277741977 0.004172027846638764 ['SFMBT1|p.A585Gfs*4|1|0.17|ENSG00000163935|chr3:52911155-52911156|-/C|frameshift_variant', 'nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 85032 12812 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.53750993586 54.389 2 0.13601810137116793 0.0007732955277741977 0.004172165477425215 ['ENSG00000139233|ENST00000266604|LLPH'] 4191 10838 AHYSAVTSL True PC9_epitope_Rep1 947.47124581119 947.47014993586 46.575 2 0.13601613503125537 0.0007732955277741977 0.004172354091410709 ['ENSG00000183751|ENST00000568546|TBL3'] 10108 15692 AYVEDTVLF True NCI_RA007_Epitope_Rep3 1055.51752729727 1055.51642993586 69.358 2 0.1360138029785158 0.0007732955277741977 0.004172577795990618 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 139147 14365 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 60.405 2 0.13601051403773898 0.0007732955277741977 0.0041728933111988015 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 54206 19537 KVVNIVPVI True PC9_epitope_Rep1 979.6430025939098 979.64190993586 79.972 2 0.13600669940124518 0.0007732955277741977 0.004173259287072005 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 1973 11873 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47456993586 50.668 2 0.136003834287296 0.0007732955277741977 0.004173534186702509 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 85710 10143 QHADPPVQI True PC9_epitope_Rep3 1003.50869394907 1003.50758993586 43.968 2 0.13599679500303488 0.0007732955277741977 0.004174209662251442 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 64851 12728 LQDPNHLTL True PC9_epitope_Rep4 1049.55055876105 1049.54946993586 56.813 2 0.13599512985123177 0.0007732955277741977 0.0041743694626698745 ['ENSG00000188997|ENST00000340067|KCTD21'] 8540 8788 ATTSVITIVK True NCI_RA007_Epitope_Rep4 1031.6226610721499 1031.6215699358602 40.613 2 0.13599224884064626 0.0007732955277741977 0.0041746459602702785 ['ENSG00000198517|ENST00000343242|MAFK'] 87704 14653 QRAAVIGDVI True PC9_epitope_Rep2 1040.5978433066398 1040.59674993586 61.629 2 0.1359905872812188 0.0007732955277741977 0.004174805432404381 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 27857 8422 FQDNHGVTV True PC9_epitope_Rep5 1015.4723084403499 1015.47120993586 37.336 2 0.13598854146569267 0.0007732955277741977 0.00417500179270618 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 17594 8330 EHINEGETAM[Oxidation]L True PC9_epitope_Rep4 1258.5499670881397 1258.54886993586 39.499 2 0.13598385360477533 0.0007732955277741977 0.004175451774730647 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 11988 16568 DHQLIQEAL True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 68.868 2 0.13597725557152132 0.0007732955277741977 0.004176085193072912 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 23842 22479 EYINFLENL True PC9_epitope_Rep4 1153.5655401188499 1153.56444993586 94.696 2 0.13597711464035955 0.0007732955277741977 0.004176098723653085 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 12956 17257 DLLEVADVLEK True NCI_RA007_Epitope_Rep1 1242.67073346338 1242.66962993586 71.256 2 0.13596524023276396 0.0007732955277741977 0.0041772389225781924 ['ENST00000509696.5_1_4:7062591-7066009:-|nuORF', 'ENSG00000109519|ENST00000264954|GRPEL1'] 88664 4726 QTETAADCRY True H1975_Epitope_Rep2 1156.48188714788 1156.48078993586 23.272 2 0.13596467080956126 0.0007732955277741977 0.004177293607202682 ['ENSG00000171940|ENST00000371471|ZNF217'] 29939 20540 FVYPLDFART True PC9_epitope_Rep2 1227.6288090817498 1227.6277099358601 84.44 2 0.13595600800515753 0.0007732955277741977 0.0041781256279147475 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 75307 23050 NILEDLETLRL True PC9_epitope_Rep2 1327.7347307022699 1327.73362993586 94.154 2 0.13595525823357998 0.0007732955277741977 0.004178197647571116 ['ENSG00000095139|ENST00000264028|ARCN1'] 104818 11768 SRAEDYEVL True PC9_epitope_Rep2 1080.50875351872 1080.5076499358602 50.598 2 0.13594810578928254 0.0007732955277741977 0.004178884740607965 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 77029 20794 NRIQDLLEL True PC9_epitope_Rep2 1112.61897267404 1112.6178699358602 85.425 2 0.13594808237057526 0.0007732955277741977 0.004178886990488132 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 44292 17112 ILDEAIYKV True PC9_epitope_Rep2 1062.5961119711399 1062.5950099358602 71.07 2 0.13594439698992397 0.0007732955277741977 0.004179241067002015 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 87010 16076 QMISRIEYV True PC9_epitope_Rep5 1137.58523001761 1137.5841299358601 66.825 2 0.13593551548250093 0.0007732955277741977 0.004180094488265831 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 141152 7847 YSSSYTESY True H1975_Epitope_Rep1 1085.41893545481 1085.41837496793 35.135 1 0.1359330466524311 0.0007732955277741977 0.004180331747966277 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 4857 9223 ALELTGLK True NCI_RA007_Epitope_Rep5 843.5065686907499 843.50546993586 42.127 2 0.13592834892109276 0.0007732955277741977 0.0041807832464704694 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 118193 20678 TYKDYVDLF True PC9_epitope_Rep5 1162.55464108198 1162.55354993586 84.593 2 0.1359225923295663 0.0007732955277741977 0.0041813365776415 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 71045 16795 LYKDVRDLL True PC9_epitope_Rep2 1133.6444591458899 1133.64280490379 69.849 3 0.13591715041490499 0.0007732955277741977 0.004181859728211442 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 87219 12959 QPITPGPSI True PC9_epitope_Rep6 908.4967322830399 908.49562993586 61.401 2 0.13591690181784172 0.0007732955277741977 0.004181883628274488 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 8501 8019 ATSKVALVY True H1975_Epitope_Rep2 950.54368247546 950.54258993586 35.793 2 0.1359089854706639 0.0007732955277741977 0.004182644774628074 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 73054 18374 MRDPIRILV True PC9_epitope_Rep5 1111.65358436095 1111.65248993586 75.694 2 0.13590168999327118 0.0007732955277741977 0.004183346346404358 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 4147 7196 AHTAEVNCL True PC9_epitope_Rep4 956.43856578392 956.43746993586 34.982 2 0.1359013325170245 0.0007732955277741977 0.004183380726204008 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 9460 5204 AVVGVVAGGGR True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 26.714 2 0.13589863235236557 0.0007732955277741977 0.004183640419947626 ['ENSG00000161016|ENST00000528957|RPL8'] 88571 12729 QTDIQGALSAY True H1975_Epitope_Rep3 1165.5615173675699 1165.5604299358602 54.173 2 0.13588625603121493 0.0007732955277741977 0.004184830941318543 ['ENSG00000198730|ENST00000361367|CTR9'] 128410 7368 VPRPPDTVST True PC9_epitope_Rep4 1067.56112344475 1067.56002993586 35.678 2 0.13588623532183583 0.0007732955277741977 0.004184832933706314 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 115416 20015 TRLPIDVQL True PC9_epitope_Rep1 1053.61824439805 1053.6171499358602 81.813 2 0.13588541189736494 0.0007732955277741977 0.004184912153685462 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 42990 5806 IESSSPEV True H1975_Epitope_Rep3 846.39707781142 846.3965249679301 27.355 1 0.13588285325139657 0.0007732955277741977 0.004185158325223543 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 54581 20973 KYITDWQNVF True PC9_epitope_Rep5 1312.6451874218799 1312.6440899358602 85.732 2 0.13588238233421254 0.0007732955277741977 0.004185203634499972 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 60595 6253 LHHDDPEVL True PC9_epitope_Rep2 1073.51417325233 1073.5130699358601 29.449 2 0.13588213509941532 0.0007732955277741977 0.004185227422379336 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 48929 7059 KEEEAGGFIA True H1975_Epitope_Rep3 1049.5029398622898 1049.50184993586 32.117 2 0.13588106315955453 0.0007732955277741977 0.004185330561413682 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 91404 18784 RHIEIFTDL True PC9_epitope_Rep1 1142.6084079903399 1142.6067749037902 77.036 3 0.13587946149710517 0.0007732955277741977 0.00418548467354445 ['ENSG00000079246|ENST00000392132|XRCC5'] 21026 14823 EQSRIITVL True PC9_epitope_Rep4 1057.6131590176099 1057.61206993586 64.955 2 0.13587298279903273 0.0007732955277741977 0.00418610811178797 ['ENSG00000158006|ENST00000374282|PAFAH2'] 75782 18733 NLLTHIENV True PC9_epitope_Rep5 1051.5662088251902 1051.5651099358602 77.071 2 0.13587125616878382 0.0007732955277741977 0.0041862742790740705 ['ENSG00000129292|ENST00000395386|PHF20L1', 'EFR3A-PHF20L1|1|fusion', 'ENST00000477051.1_1_8:133854703-133858165:+|nuORF'] 35452 9555 GSHSMRYFFT True H1975_Epitope_Rep2 1231.5444278347898 1231.54279490379 41.727 3 0.13586970322612013 0.0007732955277741977 0.00418642373659832 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 108222 19328 SYIALPLTL True NCI_RA007_Epitope_Rep5 989.57973363101 989.57918496793 81.223 1 0.1358556243801482 0.0007732955277741977 0.004187778946435523 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 108835 18796 SYVRSLPFF True PC9_epitope_Rep6 1114.5811306133398 1114.58002993586 84.939 2 0.1358546110596935 0.0007732955277741977 0.004187876503956526 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 63803 12181 LNGTDPEDVIR True PC9_epitope_Rep2 1227.60953018915 1227.6084299358602 52.166 2 0.13585326764974234 0.0007732955277741977 0.004188005844337288 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 21367 14532 ERGPVLQL True PC9_epitope_Rep1 910.5236157372199 910.52250993586 60.722 2 0.13585049143223557 0.0007732955277741977 0.004188273144601352 ['nc|ENSG00000076706|P43121-2|MCAM', 'ENST00000528533.5_1_11:119181936-119187838:-|nuORF', 'ENSG00000076706|ENST00000264036|MCAM'] 65343 18571 LRDGQILEL True PC9_epitope_Rep3 1055.59750895347 1055.59640993586 76.658 2 0.13584682184184335 0.0007732955277741977 0.004188626486624157 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 109091 16884 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.5744349679301 70.191 1 0.13584321798660767 0.0007732955277741977 0.004188973527733607 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 14163 13347 DSDMQTLVY True H1975_Epitope_Rep3 1070.45902644498 1070.45847496793 56.601 1 0.13583274533703224 0.0007732955277741977 0.004189982175676149 ['ENSG00000149823|ENST00000279281|VPS51'] 121704 18524 VFLENVIR True PC9_epitope_Rep1 988.5705659296399 988.56946993586 76.041 2 0.13582440122994122 0.0007732955277741977 0.004190785989995603 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 4370 17869 AILSQFEKV True PC9_epitope_Rep5 1033.5807962601698 1033.5796899358602 73.752 2 0.13581757625014731 0.0007732955277741977 0.00419144357526619 ['ENSG00000162441|ENST00000377223|LZIC', 'nc|ENSG00000162441|Q8WZA0-2|LZIC'] 101281 24772 SLIEDLILL True PC9_epitope_Rep5 1027.6165130625498 1027.61540993586 100.43 2 0.1358173153443617 0.0007732955277741977 0.0041914687155036046 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'SMYD3|p.H408N|1|0.17|ENSG00000185420|chr1:245749628-245749628|G/T|missense_variant', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 136831 6680 YADEEIPR True NCI_RA007_Epitope_Rep1 991.4610750503099 991.45996993586 29.994 2 0.1358159439580732 0.0007732955277741977 0.004191600861351202 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 116880 15343 TVFDEAIRA True PC9_epitope_Rep2 1020.5240096600398 1020.52290993586 64.296 2 0.13581565498451786 0.0007732955277741977 0.0041916287071711465 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 134433 19727 VYPNSFFRY True PC9_epitope_Rep3 1191.5712942056298 1191.57018993586 81.108 2 0.13581434450798244 0.0007732955277741977 0.004191754988472708 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 40505 10649 HRDSGILGL True PC9_epitope_Rep6 966.5246783663799 966.52358993586 51.778 2 0.1358128931460247 0.0007732955277741977 0.0041918948502881895 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 117949 14273 TYADTLNHL True PC9_epitope_Rep2 1046.5032742154601 1046.5021699358601 60.167 2 0.1358083964143069 0.0007732955277741977 0.004192328211212306 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 77000 18137 NRGQFFTVY True PC9_epitope_Rep1 1130.55089311422 1130.5497899358602 74.556 2 0.13580802076999024 0.0007732955277741977 0.004192364414968475 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 132469 14521 VVDEIFNEY True H1975_Epitope_Rep3 1126.51825557326 1126.51767496793 61.218 1 0.13580780487697283 0.0007732955277741977 0.004192385222392774 ['ENSG00000100220|ENST00000216038|RTCB'] 69809 14990 LVGIDIFTGK True NCI_RA007_Epitope_Rep2 1061.61209638845 1061.61098993586 62.99 2 0.1358009667002007 0.0007732955277741977 0.004193044327765893 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 87975 17534 QRMTTQLLL True PC9_epitope_Rep3 1102.6168644990598 1102.61576993586 72.628 2 0.1358007307816514 0.0007732955277741977 0.004193067068868465 ['ENSG00000110195|ENST00000393676|FOLR1'] 9977 19331 AYPEYLITY True PC9_epitope_Rep6 1131.54882742555 1131.5477299358602 87.005 2 0.13579794357167163 0.0007732955277741977 0.004193335748058818 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 138437 11432 YHISPSSSSL True PC9_epitope_Rep5 1076.5138388991602 1076.51274993586 48.971 2 0.13579527019738513 0.0007732955277741977 0.004193593469795138 ['ENSG00000130702|ENST00000252999|LAMA5'] 43689 14927 IHDGMNLEL True PC9_epitope_Rep6 1040.49608066004 1040.49498993586 69.414 2 0.1357938952370639 0.0007732955277741977 0.004193726026414513 ['ENSG00000198258|ENST00000586895|UBL5'] 76625 19810 NQQLPIESQMV True PC9_epitope_Rep1 1285.63363676201 1285.63252993586 81.015 2 0.135787899899436 0.0007732955277741977 0.004194304070897814 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 137876 11273 YETLTITQA True H1975_Epitope_Rep3 1038.5233409536997 1038.5222499358601 48.467 2 0.1357858677988482 0.0007732955277741977 0.004194500015100658 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 75808 20077 NLNPEFISV True PC9_epitope_Rep4 1031.5287606873098 1031.52766993586 85.359 2 0.13578463969387436 0.0007732955277741977 0.004194618438845858 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 86153 10982 QIDPTIQRV True PC9_epitope_Rep5 1068.5927579262 1068.5916699358602 47.232 2 0.1357841003058825 0.0007732955277741977 0.00419467045201248 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 98147 20628 SESPIVVVL True PC9_epitope_Rep4 941.5433481222899 941.54279496793 87.502 1 0.13577777287228457 0.0007732955277741977 0.004195280653826452 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 75087 15333 NHVPVITTL True PC9_epitope_Rep1 992.5654805492001 992.56438993586 63.798 2 0.13575032263694675 0.0007732955277741977 0.0041979289015822265 ['ENST00000609454.5_1_22:38228707-38236239:-|nuORF', 'ENST00000498417.5_1_22:38228707-38229954:-|nuORF', 'ENSG00000100124|ENST00000215941|ANKRD54'] 105091 12773 SREDSTMIL True PC9_epitope_Rep1 1050.5015599633 1050.50046993586 54.005 2 0.13574905339706086 0.0007732955277741977 0.004198051390818245 ['ENSG00000071894|ENST00000616140|CPSF1'] 16348 13459 EEIEGLISA True NCI_RA007_Epitope_Rep5 959.4811417885498 959.48004993586 58.456 2 0.13574370886723217 0.0007732955277741977 0.004198567208644817 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 23834 19174 EYIKFLRSI True PC9_epitope_Rep5 1167.6651945904698 1167.6640899358601 78.79 2 0.1357378056191029 0.0007732955277741977 0.004199137022975704 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 54306 20765 KYAMMFAEL True PC9_epitope_Rep3 1102.51912460374 1102.51802993586 85.143 2 0.13573700519291848 0.0007732955277741977 0.004199214290444744 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 32162 8825 GEVLDPTAA True H1975_Epitope_Rep3 871.4287122928699 871.42816496793 38.953 1 0.13573548423293455 0.0007732955277741977 0.004199361117009981 ['ENSG00000140688|ENST00000327237|RUSF1', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 75224 12155 NIDPITM[Oxidation]AY True H1975_Epitope_Rep3 1052.48484765044 1052.48374993586 51.924 2 0.13573138865169124 0.0007732955277741977 0.004199756511036669 ['ENSG00000116285|ENST00000377482|ERRFI1'] 87837 17841 QRGEFVVSL True PC9_epitope_Rep5 1033.55564414149 1033.5545499358602 73.643 2 0.1357300952764507 0.0007732955277741977 0.004199881383214434 ['ENSG00000163214|ENST00000457308|DHX57'] 99420 16485 SHYFQSLEV True PC9_epitope_Rep2 1108.5189242796 1108.5178299358602 68.652 2 0.13572801259407255 0.0007732955277741977 0.004200082468753615 ['ENSG00000168612|ENST00000372523|ZSWIM1'] 15215 11347 EADVAQLEY True H1975_Epitope_Rep3 1036.47130538084 1036.4707749679299 48.757 1 0.1357270463954332 0.0007732955277741977 0.004200175759648619 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 140064 15143 YQITQINHGL True PC9_epitope_Rep3 1185.61422164677 1185.6131299358601 63.387 2 0.13572585161729905 0.0007732955277741977 0.004200291123770388 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 66090 5322 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 25.524 3 0.13572518399479946 0.0007732955277741977 0.004200355588720399 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 31770 6824 GEIASFDKA True H1975_Epitope_Rep2 936.4552613938799 936.45416993586 31.167 2 0.1357184728213025 0.0007732955277741977 0.00420100366712918 ['ENSG00000034510|ENST00000233143|TMSB10'] 75077 9215 NHVASDISL True PC9_epitope_Rep6 954.47705946762 954.47596993586 45.586 2 0.13571086072118438 0.0007732955277741977 0.004201738864992354 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 68935 7439 LTPDETYVPK True H1975_Epitope_Rep1 1161.5917548666898 1161.59064993586 33.617 2 0.13570913723263472 0.0007732955277741977 0.004201905341976324 ['CON__P02769'] 25590 17355 FELLDRILP True H1975_Epitope_Rep2 1114.63864548946 1114.63754993586 72.05 2 0.13570884699898475 0.0007732955277741977 0.0042019333771657 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF', 'ENST00000585799.5_1_19:11132109-11172489:+|nuORF', 'ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 53187 10934 KQDSAFSNL True PC9_epitope_Rep5 1008.48762415132 1008.48652993586 47.047 2 0.1356936703516717 0.0007732955277741977 0.004203399626651092 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 92370 17296 RLPETLPSL True PC9_epitope_Rep4 1024.59169529704 1024.5905899358602 74.532 2 0.13569029547353623 0.0007732955277741977 0.004203725749808641 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 95618 16910 RYALQLQQI True PC9_epitope_Rep2 1131.64004247179 1131.6389499358602 70.287 2 0.13568778688892066 0.0007732955277741977 0.004203968176994665 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1'] 4730 14912 ALDENGNLWY True H1975_Epitope_Rep3 1193.53530261973 1193.5342099358602 62.746 2 0.13568751984370758 0.0007732955277741977 0.004203993984798873 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1'] 118621 21866 TYSIGFLRF True PC9_epitope_Rep5 1102.5811306133398 1102.58002993586 89.144 2 0.13568500715126142 0.0007732955277741977 0.004204236824284508 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 12745 7656 DLEGLSQR True PC9_epitope_Rep6 916.46140940348 916.46030993586 38.771 2 0.1356779717341196 0.0007732955277741977 0.004204916836827026 ['ENSG00000100345|ENST00000216181|MYH9'] 8062 11611 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 49.729 2 0.13567741289727714 0.0007732955277741977 0.004204970856202867 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 106843 7165 SVASISLTK True NCI_RA007_Epitope_Rep4 904.52294703088 904.52184993586 34.182 2 0.13567451147139623 0.0007732955277741977 0.004205251330508527 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 130099 10412 VSDNGPCLGY True H1975_Epitope_Rep3 1023.4331460503099 1023.43257496793 45.109 1 0.1356705998770485 0.0007732955277741977 0.0042056294847871625 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 45149 23168 IPNSIMTILEA True PC9_epitope_Rep1 1200.6424105405601 1200.6413099358601 93.91 2 0.13565883682207505 0.0007732955277741977 0.004206766883302516 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 115248 11593 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.5811499358601 49.92 2 0.13564484358056714 0.0007732955277741977 0.004208120319885181 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 2776 8744 AETSPAPIP True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 38.595 1 0.13564129703965971 0.0007732955277741977 0.00420846341226518 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 4874 2629 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep2 1219.5754535599897 1219.57434993586 14.762 2 0.13563501649057072 0.0007732955277741977 0.0042090710604262 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 72067 3984 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 20.393 2 0.13563485979168452 0.0007732955277741977 0.004209086222277592 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 104305 13585 SQIPAAVKL True PC9_epitope_Rep5 925.55966689277 925.55856993586 57.277 2 0.13562715478336188 0.0007732955277741977 0.004209831809090389 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 1827 8453 AEIDAHLVA True H1975_Epitope_Rep1 937.48689587533 937.48578993586 37.442 2 0.13562590818602163 0.0007732955277741977 0.004209952450237079 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 129282 20142 VQVPVPVTV True PC9_epitope_Rep1 936.5644179200399 936.56386496793 82.305 1 0.13562269925723452 0.0007732955277741977 0.004210263014384202 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 76436 21217 NQFNSFISV True PC9_epitope_Rep5 1054.5083595959 1054.5072699358602 86.659 2 0.13561390504988668 0.0007732955277741977 0.004211114244826527 ['ENSG00000136021|ENST00000360820|SCYL2'] 7601 18001 ASFNDTFVHV True PC9_epitope_Rep2 1135.5298233164701 1135.5287299358602 74.543 2 0.13560920332008378 0.0007732955277741977 0.0042115694159296805 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 76240 8846 NPEPELLVR True H1975_Epitope_Rep1 1065.58185888933 1065.5807699358602 38.948 2 0.13560859106666864 0.0007732955277741977 0.004211628691322787 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 140348 11129 YRDPNTIETL True PC9_epitope_Rep6 1220.60371653272 1220.60260993586 53.748 2 0.13560822717491497 0.0007732955277741977 0.004211663921940297 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 79253 8610 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 37.954 2 0.1356081898728823 0.0007732955277741977 0.004211667533397876 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 40601 15323 HRIFEPNCL True PC9_epitope_Rep1 1127.5545985956699 1127.5535099358601 63.759 2 0.1356049162686657 0.0007732955277741977 0.004211984484687447 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF'] 35254 6821 GRDENSVEL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 31.643 2 0.13560347281196974 0.0007732955277741977 0.00421212424806205 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 44023 17004 IIIFVPVPQLK True NCI_RA007_Epitope_Rep1 1265.81113054817 1265.81002993586 70.268 2 0.13559496009446398 0.0007732955277741977 0.004212948589155664 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 24180 15544 EYQKVWNLF True NCI_RA007_Epitope_Rep5 1225.6131590176099 1225.61206993586 66.49 2 0.1355919113802056 0.0007732955277741977 0.004213243854500253 ['ENSG00000059378|ENST00000263549|PARP12'] 139936 20836 YQAPDIDVQL True PC9_epitope_Rep3 1160.57135377528 1160.5702499358601 85.417 2 0.13558497159582655 0.0007732955277741977 0.004213916042879567 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 6382 6348 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 29.393 2 0.13558480723732177 0.0007732955277741977 0.0042139319639493255 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 105058 14475 SRDPVQLNL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 60.948 2 0.1355794552709419 0.0007732955277741977 0.004214450430388657 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 21577 4804 ERQPGAASL True PC9_epitope_Rep2 927.4773938207899 927.47628993586 23.849 2 0.1355791289261812 0.0007732955277741977 0.004214482046752816 ['ENSG00000180921|ENST00000388913|FAM83H'] 21715 21180 ERSPLLFTL True PC9_epitope_Rep5 1074.60734536118 1074.6062499358602 86.52 2 0.13557161780904944 0.0007732955277741977 0.004215209790484244 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 90351 11729 REFSDFIQA True NCI_RA007_Epitope_Rep5 1111.52982331647 1111.5287299358602 51.77 2 0.13555047019226643 0.0007732955277741977 0.004217259426433196 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 43835 13435 IHSPVVNEL True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 56.538 2 0.13554716306316905 0.0007732955277741977 0.004217580043813037 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 106893 12904 SVDGVIKEV True PC9_epitope_Rep3 944.51786165044 944.51676993586 54.655 2 0.1355427918133807 0.0007732955277741977 0.0042180038618235315 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 17666 14959 EHLNYVTEI True PC9_epitope_Rep2 1116.54513902744 1116.5440499358601 62.799 2 0.13554182367252737 0.0007732955277741977 0.004218097734384467 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 138500 14425 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 60.485 2 0.13553925875009637 0.0007732955277741977 0.004218346443544573 ['ENSG00000115306|ENST00000356805|SPTBN1'] 8188 14805 ATEYEIELY True H1975_Epitope_Rep2 1129.5179212200899 1129.5168299358602 62.105 2 0.13553265974437337 0.0007732955277741977 0.004218986386480231 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant'] 14186 13932 DSDSVPAFY True H1975_Epitope_Rep2 999.4185415319898 999.41797496793 58.738 1 0.1355197784705683 0.0007732955277741977 0.004220235832902163 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 53392 18414 KQVEEIFNL True PC9_epitope_Rep4 1118.5971746003 1118.5966749679299 78.897 1 0.13551700350952478 0.0007732955277741977 0.004220505043984588 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 131054 14212 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56567496793 59.845 1 0.13551614844867346 0.0007732955277741977 0.004220588000589578 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 104134 4035 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 22.353 2 0.13551230374464573 0.0007732955277741977 0.004220961027394061 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 65347 18439 LRDGQILEL True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 75.948 2 0.13551004937442152 0.0007732955277741977 0.0042211797695298064 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 105950 5616 SSSKGSLGGGF True NCI_RA007_Epitope_Rep3 982.4719740871798 982.47086993586 29.083 2 0.13550712946350382 0.0007732955277741977 0.004221463105903049 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 43441 12643 IGGIGTVPVGR True PC9_epitope_Rep3 1024.6029286870798 1024.60182993586 53.653 2 0.13550585148567781 0.0007732955277741977 0.004221587121626599 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 136434 20256 WVDPNSPVL True PC9_epitope_Rep5 1025.51819600361 1025.5170899358602 82.964 2 0.13550122016726843 0.0007732955277741977 0.004222036577664015 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 72042 18954 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 78.676 2 0.1355001173812413 0.0007732955277741977 0.004222143606823224 ['ENSG00000198712|ENST00000361739|MT-CO2'] 2250 14476 AENPDIFAV True H1975_Epitope_Rep2 974.4709114580199 974.46980993586 60.839 2 0.13550000158299436 0.0007732955277741977 0.004222154845595043 ['ENSG00000139514|ENST00000380752|SLC7A1', 'SLC7A1|p.I171V|1|0.13|ENSG00000139514|chr13:29532842-29532842|T/C|missense_variant'] 74265 5497 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 26.197 2 0.13549329839946223 0.0007732955277741977 0.004222805471890432 ['ENSG00000167658|ENST00000309311|EEF2'] 54135 16723 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5589699358602 69.573 2 0.13549034652147804 0.0007732955277741977 0.004223092019323102 ['ENSG00000105372|ENST00000598742|RPS19'] 2516 6206 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.49668993586 28.884 2 0.13548260107360074 0.0007732955277741977 0.004223843983956462 ['ENSG00000146733|ENST00000275605|PSPH'] 118542 18097 TYQLGFHSI True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 74.807 2 0.13548247971071678 0.0007732955277741977 0.004223855767490643 ['ENSG00000142507|ENST00000270586|PSMB6'] 70627 24404 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 105.62 3 0.13547755310351126 0.0007732955277741977 0.004224334135922477 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 118691 13404 TYTDVTPRQF True PC9_epitope_Rep3 1226.59315184902 1226.5920499358601 56.591 2 0.135476101798737 0.0007732955277741977 0.004224475066312502 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 141411 14114 YTELEAIM[Oxidation]YA True H1975_Epitope_Rep2 1218.5478418298198 1218.5467499358601 59.444 2 0.13547172817649356 0.0007732955277741977 0.004224899799334713 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 95818 15725 RYIPTAAAF True PC9_epitope_Rep1 1008.5392658013599 1008.53816993586 65.309 2 0.13546786799518562 0.0007732955277741977 0.004225274705921036 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 2512 6131 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.49668993586 28.56 2 0.13546499136158072 0.0007732955277741977 0.00422555411025706 ['ENSG00000146733|ENST00000275605|PSPH'] 135203 7572 WESPSPPKP True H1975_Epitope_Rep1 1023.5025459394699 1023.50144993586 34.116 2 0.13545914191457412 0.0007732955277741977 0.004226122317073094 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 107017 10801 SVFGTMPLK True NCI_RA007_Epitope_Rep5 978.5208388558999 978.51974993586 48.18 2 0.1354548925817328 0.0007732955277741977 0.0042265351384554225 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 23669 12824 EYAVSVLLR True NCI_RA007_Epitope_Rep2 1048.59169529704 1048.5905899358602 54.5 2 0.1354519509586296 0.0007732955277741977 0.004226820939575382 ['CON__P02769'] 111029 13161 THDEAINVL True PC9_epitope_Rep3 1010.5032742154599 1010.50216993586 55.655 2 0.13543995952808882 0.0007732955277741977 0.004227986196099198 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 47929 12767 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.68958993586 54.414 2 0.1354368671905052 0.0007732955277741977 0.004228286742709632 ['ENSG00000103479|ENST00000262133|RBL2'] 70321 7744 LVSESSDVLPK True NCI_RA007_Epitope_Rep5 1172.6288686514001 1172.6277699358602 36.485 2 0.13543594109223045 0.0007732955277741977 0.004228376755003343 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 34869 9510 GQLDTPGVHNV True PC9_epitope_Rep2 1135.56218607391 1135.56108993586 41.929 2 0.13543529357452752 0.0007732955277741977 0.004228439691731308 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 40551 11694 HRFPTVAV True PC9_epitope_Rep5 925.5133854066898 925.5122899358599 49.977 2 0.13543259012885459 0.0007732955277741977 0.004228702468329998 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 17788 17493 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 72.081 2 0.1354323852631518 0.0007732955277741977 0.004228722382061228 ['ENSG00000143256|ENST00000368010|PFDN2'] 107318 4631 SVLEPGTAK True NCI_RA007_Epitope_Rep4 900.4916469025999 900.49054993586 24.23 2 0.1354311942659675 0.0007732955277741977 0.004228838153385759 ['nc|ENSG00000157617|Q9Y426-2|C2CD2', 'nc|ENSG00000157617|Q9Y426-3|C2CD2', 'ENSG00000157617|ENST00000380486|C2CD2'] 39584 14163 HLIGDFSKV True PC9_epitope_Rep5 1014.54983048506 1014.54872993586 59.489 2 0.1354286038906281 0.0007732955277741977 0.004229089962597196 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 17547 17668 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 75.986 2 0.13542376478501392 0.0007732955277741977 0.004229560409547011 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 94879 11933 RTALNLFFK True NCI_RA007_Epitope_Rep4 1108.6393141958 1108.63820993586 52.9 2 0.13542223777361775 0.0007732955277741977 0.004229708872888194 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 140497 13904 YRLLPGPSA True PC9_epitope_Rep2 972.5392658013599 972.53816993586 58.761 2 0.1354220175642573 0.0007732955277741977 0.004229730283118761 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 99220 15307 SHLSDQLTL True PC9_epitope_Rep3 1012.5189242796001 1012.51782993586 64.03 2 0.13541293033945118 0.0007732955277741977 0.004230613897433173 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 1172 6069 AEAPSPAPTP True H1975_Epitope_Rep2 936.4552613938799 936.45471496793 28.321 1 0.13541175506198233 0.0007732955277741977 0.004230728191185614 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 95718 14242 RYGDLVDYL True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.54912993586 63.333 2 0.13539961619994526 0.0007732955277741977 0.00423190885354656 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 125926 20366 VLDDKLVFV True PC9_epitope_Rep5 1046.60119735158 1046.60010993586 83.373 2 0.13539823027972606 0.0007732955277741977 0.004232043673033784 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 1073 5586 AEAIHSPQV True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 26.488 2 0.13539335709868566 0.0007732955277741977 0.004232517759823023 ['ENSG00000047410|ENST00000367478|TPR'] 133085 10560 VVQDGITLITK True NCI_RA007_Epitope_Rep1 1185.69688864157 1185.6957899358601 45.061 2 0.13538570617078757 0.0007732955277741977 0.004233262185218838 ['ENSG00000079246|ENST00000392132|XRCC5'] 62725 23721 LLLPDYYLVTV True PC9_epitope_Rep5 1307.73769082439 1307.7365899358601 96.223 2 0.13538333928269317 0.0007732955277741977 0.0042334925065697065 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 74785 10452 NHDTALTL True PC9_epitope_Rep1 883.43994568291 883.43884993586 45.091 2 0.1353829963809455 0.0007732955277741977 0.0042335258752887895 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 139121 21398 YLDPSVLSGV True PC9_epitope_Rep1 1048.54407639828 1048.54357496793 87.141 1 0.13538222933260988 0.0007732955277741977 0.004233600519828252 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 2133 11311 AELNEFLTR True NCI_RA007_Epitope_Rep2 1091.56112344475 1091.56002993586 48.587 2 0.13537757357344 0.0007732955277741977 0.004234053618262127 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 8384 4448 ATLNVSTTR True NCI_RA007_Epitope_Rep5 961.5192586327701 961.51816993586 23.753 2 0.13537446801173186 0.0007732955277741977 0.0042343558781324135 ['ENST00000460846.1_1_13:111557570-111567134:-|nuORF', 'nc|ENSG00000088448|Q9NXR5-2|ANKRD10', 'ENSG00000088448|ENST00000267339|ANKRD10'] 86166 12346 QIEEAGWSY True H1975_Epitope_Rep2 1081.4716397340098 1081.47107496793 52.573 1 0.1353722814241667 0.0007732955277741977 0.004234568708355604 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 20856 15896 EQLAIAEFAR True PC9_epitope_Rep6 1146.6033226098998 1146.6022299358601 73.424 2 0.13537202626868597 0.0007732955277741977 0.00423459354445386 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF', 'TCP1|p.R433L|1|0.23|ENSG00000120438|chr6:159779783-159779783|C/A|missense_variant'] 99281 7809 SHQTGVVAL True PC9_epitope_Rep4 910.4872302284999 910.48612993586 37.439 2 0.1353536819925396 0.0007732955277741977 0.004236379500523725 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 140295 17168 YRAQQIIQL True PC9_epitope_Rep5 1131.64004247179 1131.6389499358602 71.057 2 0.1353533819947612 0.0007732955277741977 0.004236408713793579 ['nc|ENSG00000139192|Q9BX59-3|TAPBPL', 'ENST00000539384.5_1_12:6560901-6571312:+|nuORF', 'ENSG00000139192|ENST00000266556|TAPBPL', 'nc|ENSG00000139192|Q9BX59-2|TAPBPL', 'nc|ENSG00000139192|Q9BX59-7|TAPBPL'] 26212 11459 FHDM[Oxidation]GGVQL True PC9_epitope_Rep1 1018.4542162284997 1018.45310993586 48.956 2 0.13534988761573735 0.0007732955277741977 0.004236749005099216 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 117520 6778 TVRSSTSSI True PC9_epitope_Rep3 936.48762415132 936.48652993586 31.092 2 0.1353483346438525 0.0007732955277741977 0.004236900246024916 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 18122 13801 EIIQRIENV True PC9_epitope_Rep4 1112.61897267404 1112.6178699358602 60.982 2 0.13534736284686905 0.0007732955277741977 0.004236994890165231 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 95647 8211 RYFDPANGKF True NCI_RA007_Epitope_Rep3 1213.5880068989297 1213.5869099358601 39.433 2 0.1353463599949522 0.0007732955277741977 0.004237092560962025 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 1042 8188 AEAEPPSEVV True H1975_Epitope_Rep1 1026.48695544498 1026.4858499358602 36.435 2 0.13534482081937022 0.0007732955277741977 0.004237242470277933 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 98062 8504 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 37.665 2 0.13534385496298854 0.0007732955277741977 0.004237336543358118 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 84461 9717 QAIDSIHQV True PC9_epitope_Rep1 1009.51925863277 1009.51816993586 42.235 2 0.13533975779246335 0.0007732955277741977 0.004237735625062009 ['ENSG00000066084|ENST00000301180|DIP2B', 'nc|ENSG00000151240|Q9Y2E4-2|DIP2C', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A'] 21126 6646 ERAPGETAL True PC9_epitope_Rep1 942.4770594676199 942.47596993586 30.368 2 0.13533888574126565 0.0007732955277741977 0.00423782057132259 ['ENSG00000092148|ENST00000399332|HECTD1'] 129689 10744 VRPPVQVY True PC9_epitope_Rep2 956.5443511817998 956.54324993586 46.645 2 0.13533059182651497 0.0007732955277741977 0.0042386285633032855 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 658 7830 AATGGGIVRV True PC9_epitope_Rep2 899.51886470995 899.51776993586 35.488 2 0.13532851307954732 0.0007732955277741977 0.004238831098386062 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 116241 19711 TTDFIFNLY True H1975_Epitope_Rep1 1132.54407639828 1132.5429699358601 82.043 2 0.13532432745122758 0.0007732955277741977 0.004239238938730717 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 17868 8362 EHVPNSVRL True PC9_epitope_Rep5 1049.56179215109 1049.5606899358602 37.107 2 0.13532074039807343 0.0007732955277741977 0.00423958848580023 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 47418 16432 IVLPAGALHQV True PC9_epitope_Rep4 1116.66552894364 1116.6644299358602 71.167 2 0.1353176078001147 0.0007732955277741977 0.004239893770929474 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C'] 90856 8646 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 38.215 2 0.13530991736407824 0.0007732955277741977 0.004240643329068993 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 77298 11518 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46578993586 49.362 2 0.13530730523722492 0.0007732955277741977 0.004240897953122286 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 134514 16497 VYQLRFQFL True NCI_RA007_Epitope_Rep5 1212.6655289436396 1212.6644299358602 70.215 2 0.1353072338777074 0.0007732955277741977 0.004240904909294114 ['ENSG00000068654|ENST00000263857|POLR1A'] 30591 19367 GAIPRLVQL True PC9_epitope_Rep1 965.6022004110898 965.60110993586 79.302 2 0.13530388310517485 0.0007732955277741977 0.004241231557455429 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 73601 10468 MVVQDGIVKA True PC9_epitope_Rep6 1058.57941636118 1058.57830993586 51.022 2 0.13529881578129618 0.0007732955277741977 0.004241725589870394 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 139094 16076 YLDIGQVYY True H1975_Epitope_Rep2 1132.54407639828 1132.54357496793 67.042 1 0.13529555825396866 0.0007732955277741977 0.004242043208450876 ['ENSG00000006555|ENST00000371276|TTC22'] 92214 21906 RLIESLFTI True PC9_epitope_Rep5 1090.63864548946 1090.63754993586 89.301 2 0.1352937894087567 0.0007732955277741977 0.004242215685950852 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant'] 29462 14529 FVEPSRQFV True PC9_epitope_Rep3 1107.5712942056298 1107.57018993586 61.007 2 0.13529307663575024 0.0007732955277741977 0.004242285189358728 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 1908 5288 AEIINPKTA True H1975_Epitope_Rep2 955.53384606775 955.53274993586 25.401 2 0.13529056422640443 0.0007732955277741977 0.004242530186580295 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'nc|ENSG00000075292|Q14966-5|ZNF638', 'ZNF638|p.G1305Vfs*22|1|0.14|ENSG00000075292|chr2:71423419-71423419|A/-|frameshift_variant'] 11018 9797 DAQSAPLRV True PC9_epitope_Rep3 955.50869394907 955.50758993586 42.639 2 0.13528744334181733 0.0007732955277741977 0.004242834538640257 ['CON__P02754'] 38932 10300 HHGYSYIL True PC9_epitope_Rep4 988.4766655448 988.47556993586 47.306 2 0.13528274941946705 0.0007732955277741977 0.004243292335673059 ['ENSG00000134531|ENST00000256951|EMP1'] 12141 7820 DIDSPPITAR True H1975_Epitope_Rep3 1083.5560380643099 1083.5549499358601 35.058 2 0.13528248944536816 0.0007732955277741977 0.004243317692305873 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 129935 8499 VRTPYTM[Oxidation]SY True PC9_epitope_Rep2 1132.52229578832 1132.52118993586 38.055 2 0.13528097835972416 0.0007732955277741977 0.004243465079351318 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 1920 5274 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5965849037902 25.369 3 0.13527568867603385 0.0007732955277741977 0.004243981060068059 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 43535 9473 IGPLGLSPK True NCI_RA007_Epitope_Rep1 880.5382031722 880.53710993586 40.843 2 0.13526870476922864 0.0007732955277741977 0.004244662398246422 ['ENSG00000197958|ENST00000361436|RPL12'] 121157 7552 VESAYEVIK True H1975_Epitope_Rep3 1036.5440763982797 1036.5429699358601 34.03 2 0.13526732315109333 0.0007732955277741977 0.004244797199386302 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 45154 21010 IPNSIMTILEA True PC9_epitope_Rep6 1200.6424105405601 1200.6413099358601 93.639 2 0.13526347309082296 0.0008064516129032258 0.004245172862769071 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 9828 18368 AYLEAIHNF True PC9_epitope_Rep5 1076.52909504048 1076.52857496793 75.672 1 0.1352492391294899 0.0008064516129032258 0.004246562003646543 ['ENSG00000042753|ENST00000263270|AP2S1'] 7530 9590 ASDTNPDFY True H1975_Epitope_Rep3 1028.40870512428 1028.4081749679299 41.9 1 0.13524901745283452 0.0008064516129032258 0.004246583641379036 ['ENSG00000197081|ENST00000356956|IGF2R'] 8557 5004 ATVETTIAR True NCI_RA007_Epitope_Rep4 960.52400966004 960.52290993586 25.73 2 0.1352406133447067 0.0008064516129032258 0.004247404041945607 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 66240 11036 LSEWQKELY True H1975_Epitope_Rep3 1194.5920892198599 1194.59098993586 47.539 2 0.13523722628996157 0.0008064516129032258 0.0042477347270831805 ['ENSG00000196453|ENST00000247930|ZNF777'] 106820 11011 SVAPEFRRL True PC9_epitope_Rep5 1073.5981776598098 1073.5970899358601 47.343 2 0.13523668237777203 0.0008064516129032258 0.004247787832721665 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 71106 19831 LYLKALEGF True PC9_epitope_Rep4 1052.5906326678798 1052.5895299358601 84.409 2 0.13523532420059314 0.0008064516129032258 0.0042479204431417296 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 3270 5228 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 25.5 2 0.1352352336402132 0.0008064516129032258 0.004247929285469339 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 23866 22841 EYIQFVPLL True PC9_epitope_Rep4 1120.6168474157198 1120.61627496793 96.081 1 0.1352311107309979 0.0008064516129032258 0.004248331866134825 ['ENSG00000179409|ENST00000319004|GEMIN4'] 61985 16061 LLDPASFEY True H1975_Epitope_Rep3 1053.50187723313 1053.50137496793 67.235 1 0.13522835084709983 0.0008064516129032258 0.004248601375519041 ['ENSG00000105397|ENST00000525621|TYK2'] 135213 14403 WEVVPEPVA True H1975_Epitope_Rep2 1024.5229470308798 1024.5223749679299 60.55 1 0.13522393625724544 0.0008064516129032258 0.004249032506086542 ['ENSG00000156136|ENST00000286648|DCK'] 75832 15496 NLPDEIYHV True PC9_epitope_Rep6 1098.5345743437401 1098.53346993586 71.784 2 0.13521842740961448 0.0008064516129032258 0.004249570562912647 ['ENSG00000148335|ENST00000372483|NTMT1'] 40449 17355 HRDDELYIL True PC9_epitope_Rep1 1172.5825871653199 1172.5814899358602 71.567 2 0.13521696430108573 0.0008064516129032258 0.004249713478073885 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 142098 14132 YVPETVYRV True PC9_epitope_Rep1 1124.5866099165999 1124.58550993586 59.184 2 0.13520917138222144 0.0008064516129032258 0.004250474763569947 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 42394 6515 IEDFRQATA True H1975_Epitope_Rep2 1049.51417325233 1049.5130699358601 29.973 2 0.1352087026288211 0.0008064516129032258 0.004250520560099392 ['ENSG00000167264|ENST00000565263|DUS2'] 70497 10672 LVVSTQTALA True H1975_Epitope_Rep3 1001.5757108797299 1001.5746099358599 46.123 2 0.13520361970106629 0.0008064516129032258 0.004251017186093248 ['CON__P02769'] 93532 5479 RQLENGTTL True NCI_RA007_Epitope_Rep4 1030.5407223533398 1030.5396299358601 27.661 2 0.1351908066535868 0.0008064516129032258 0.004252269335597049 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-5|ESYT2', 'ENST00000435514.3_1_7:158526900-158536411:-|nuORF'] 85884 20902 QHFDTIYSIL True PC9_epitope_Rep2 1235.6186383208699 1235.61754993586 85.845 2 0.13518882418664588 0.0008064516129032258 0.0042524631038634315 ['ENSG00000010292|ENST00000315579|NCAPD2'] 34904 18492 GQMGSFIRL True PC9_epitope_Rep2 1007.5222358382299 1007.52112993586 76.465 2 0.13518347785614362 0.0008064516129032258 0.004252985702940077 ['ENSG00000119392|ENST00000309971|GLE1'] 85776 17865 QHDPETSVLVL True PC9_epitope_Rep5 1236.635016661 1236.6339099358602 73.737 2 0.13518161346448526 0.0008064516129032258 0.004253167960494818 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 62932 13384 LLPDNVHYV True PC9_epitope_Rep6 1068.5603951687601 1068.55928993586 63.152 2 0.13517974975034883 0.0008064516129032258 0.004253350159528439 ['ENSG00000039123|ENST00000230640|MTREX'] 108701 12338 SYREDPIVY True PC9_epitope_Rep2 1140.5451390274397 1140.5440499358601 52.769 2 0.13517573278031436 0.0008064516129032258 0.004253742889781026 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 8031 4397 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 22.023 2 0.13517119284759296 0.0008064516129032258 0.004254186792057208 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 95559 20144 RWSPVRPLVF True PC9_epitope_Rep1 1255.71896149883 1255.71786993586 82.313 2 0.13517097082052862 0.0008064516129032258 0.004254208502433481 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 47197 10431 IVAEEFLK True H1975_Epitope_Rep3 947.5327834385898 947.53168993586 45.182 2 0.13517034372751977 0.0008064516129032258 0.004254269821788674 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'ENST00000440787.5_1_3:9845376-9847896:+|nuORF', 'nc|ENSG00000241553|P59998-4|ARPC4'] 29856 13676 FVTEGSHFVEA True PC9_epitope_Rep5 1221.56660274801 1221.56550993586 57.63 2 0.13516946183697343 0.0008064516129032258 0.004254356057618625 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 43051 8757 IEVDSSPSV True H1975_Epitope_Rep2 931.44984166027 931.4492949679301 38.647 1 0.13516150417696557 0.0008064516129032258 0.004255134276966986 ['RAP2C|p.E43D|1|0.05|ENSG00000123728|chrX:132217140-132217140|C/A|missense_variant', 'ENSG00000181467|ENST00000323534|RAP2B', 'ENSG00000125249|ENST00000245304|RAP2A', 'ENSG00000123728|ENST00000370874|RAP2C'] 57762 11180 LEEPLTQVA True H1975_Epitope_Rep3 998.52842633414 998.5278749679301 48.101 1 0.13515113843464138 0.0008064516129032258 0.00425614820562029 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 41189 17822 HVIDSIVGDGI True PC9_epitope_Rep4 1123.5873381925899 1123.58624993586 76.585 2 0.13514882877485657 0.0008064516129032258 0.004256374158298963 ['ENSG00000166801|ENST00000675163|FAM111A'] 88690 9001 QTFLLQTTK True NCI_RA007_Epitope_Rep4 1078.60225998074 1078.60116993586 41.455 2 0.1351437238627343 0.0008064516129032258 0.0042568736109343695 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2', 'MTA2|p.L461P|1|0.1|ENSG00000149480|chr11:62595365-62595365|A/G|missense_variant'] 76775 10233 NRAAAQYYL True PC9_epitope_Rep4 1068.53524305008 1068.5341499358601 47.04 2 0.13514023377979423 0.0008064516129032258 0.004257215105787863 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 118513 16410 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 68.258 2 0.13513102382541217 0.0008064516129032258 0.00425811640400213 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 45740 7545 IRYPDSHQL True PC9_epitope_Rep4 1127.57235683479 1127.57071490379 36.391 3 0.13513067117313313 0.0008064516129032258 0.004258150918763284 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 12751 9260 DLEIATYR True H1975_Epitope_Rep3 979.4974605590301 979.49636993586 40.61 2 0.13512096791274178 0.0008064516129032258 0.004259100704062217 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 32899 10744 GHVAPSVSL True PC9_epitope_Rep1 865.4657665079301 865.46466993586 46.213 2 0.13511459766118464 0.0008064516129032258 0.004259724357881287 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 11973 9690 DHNVSSVAI True PC9_epitope_Rep2 940.46140940348 940.46030993586 42.612 2 0.1351111962321004 0.0008064516129032258 0.004260057398036958 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 75217 13830 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 58.344 2 0.13510907061381525 0.0008064516129032258 0.0042602655342779926 ['ENSG00000116285|ENST00000377482|ERRFI1'] 77030 21176 NRIQDLLEL True PC9_epitope_Rep3 1112.61897267404 1112.6178699358602 86.741 2 0.13510845492589968 0.0008064516129032258 0.0042603258230689235 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 105129 16262 SRFGKFVQL True PC9_epitope_Rep5 1080.60801406752 1080.6069099358601 67.543 2 0.1351050610013644 0.0008064516129032258 0.004260658174761237 ['ENSG00000145555|ENST00000513610|MYO10'] 76825 10714 NRAQIQAVI True PC9_epitope_Rep2 1011.58252759567 1011.58142993586 46.527 2 0.13510449016960321 0.0008064516129032258 0.00426071407625196 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 83566 19130 PVAEYFSGV True PC9_epitope_Rep4 967.4650978015899 967.46400993586 81.676 2 0.13509395021532944 0.0008064516129032258 0.004261746382999227 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 139074 15111 YLDDPTNSWY True H1975_Epitope_Rep1 1272.52988288612 1272.52937496793 63.378 1 0.1350934099132787 0.0008064516129032258 0.004261799308049779 ['ENSG00000064195|ENST00000434704|DLX3'] 120525 16439 VEFLEPLEA True H1975_Epitope_Rep3 1045.5331773614098 1045.53267496793 68.715 1 0.13509276207028348 0.0008064516129032258 0.004261862768082351 ['ENSG00000122965|ENST00000261741|RBM19'] 90562 8598 REMEENFAV True NCI_RA007_Epitope_Rep3 1123.49680893603 1123.49570993586 40.895 2 0.1350881419167964 0.0008064516129032258 0.004262315366362163 ['ENSG00000026025|ENST00000544301|VIM'] 99407 4841 SHVSGTTTL True PC9_epitope_Rep3 901.45051036661 901.44940993586 23.717 2 0.13508747103982316 0.0008064516129032258 0.004262381090586047 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 24027 10032 EYNKSWQTF True NCI_RA007_Epitope_Rep5 1201.5403880001697 1201.53928993586 45.227 2 0.13508700971025517 0.0008064516129032258 0.004262426286529159 ['ENSG00000198440|ENST00000333201|ZNF583'] 74846 18646 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 76.511 2 0.13508519693516355 0.0008064516129032258 0.004262603886667331 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 30047 19199 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6166049037902 78.644 3 0.13508465411928203 0.0008064516129032258 0.004262657068528631 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 62733 11327 LLLPGELAK True H1975_Epitope_Rep2 952.5957180483199 952.59462993586 48.618 2 0.13507660884134803 0.0008064516129032258 0.0042634453737080726 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 67830 11219 LTAHEPPLLY True H1975_Epitope_Rep2 1152.6179100448799 1152.6168099358601 48.195 2 0.135064950623955 0.0008064516129032258 0.004264587943183869 ['nc|ENSG00000100299|P15289-2|ARSA', 'nc|ENSG00000100299|P15289|ARSA', 'ENSG00000100299|ENST00000216124|ARSA'] 95902 20012 RYLDLFTSF True PC9_epitope_Rep6 1160.5866099165999 1160.58550993586 89.642 2 0.13506391547063293 0.0008064516129032258 0.004264689408526368 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 85453 15136 QEYVTFLGA True H1975_Epitope_Rep3 1026.5022115862998 1026.5016749679298 63.62 1 0.13506124336795944 0.0008064516129032258 0.004264951338056469 ['ENSG00000197956|ENST00000368719|S100A6'] 94940 6740 RTIAPIIGR True NCI_RA007_Epitope_Rep4 995.6239984848298 995.62290993586 32.546 2 0.13505621544483318 0.0008064516129032258 0.004265444237028514 ['ENSG00000096401|ENST00000371477|CDC5L', 'CDC5L|p.L387Cfs*9|1|0.66|ENSG00000096401|chr6:44419515-44419515|T/-|frameshift_variant'] 96322 17462 RYSNLILNLF True NCI_RA007_Epitope_Rep3 1251.69755734791 1251.69646993586 76.615 2 0.13504754831136292 0.0008064516129032258 0.0042662940283363145 ['ENSG00000078142|ENST00000262039|PIK3C3', 'ENST00000587328.2_1_18:39644671-39661098:+|nuORF'] 2851 4969 AEVEHVVNA True H1975_Epitope_Rep3 966.4770594676199 966.47596993586 24.241 2 0.13504596510807923 0.0008064516129032258 0.004266449275621627 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 8094 10393 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.4561749679299 44.988 1 0.13504353965053914 0.0008064516129032258 0.004266687124315825 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 104988 15808 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 65.618 2 0.13504123004895985 0.0008064516129032258 0.004266913623950776 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 103057 7931 SPGAPGPLTLK True H1975_Epitope_Rep1 1036.59169529704 1036.5905899358602 35.457 2 0.13503745039779466 0.0008064516129032258 0.004267284315066402 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 136858 13613 YADPTKRLEL True PC9_epitope_Rep3 1204.6451874218799 1204.6435349037902 57.426 3 0.1350372282532535 0.0008064516129032258 0.004267306102989404 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5'] 43440 12128 IGGIGTVPVGR True PC9_epitope_Rep2 1024.6029286870798 1024.60182993586 51.96 2 0.13502624616276687 0.0008064516129032258 0.004268383362756555 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 100848 10143 SLEPVAVELK True H1975_Epitope_Rep3 1083.6175756917098 1083.61646993586 44.059 2 0.1350233730442912 0.0008064516129032258 0.004268665238211627 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 7448 5146 ASAIPAYSK True NCI_RA007_Epitope_Rep4 906.4810822189 906.47998993586 26.318 2 0.1350197419356088 0.0008064516129032258 0.0042690215047533064 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 49296 2955 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 15.61 2 0.13501396365880444 0.0008064516129032258 0.004269588501437525 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 46617 8517 ITDHGSLIY True H1975_Epitope_Rep1 1017.51311062317 1017.51257496793 37.69 1 0.13501176894969405 0.0008064516129032258 0.004269803878003281 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 29858 8597 FVTFDDHD True NCI_RA007_Epitope_Rep3 994.40322582102 994.40212993586 40.891 2 0.13501077301737308 0.0008064516129032258 0.004269901616811034 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 63555 11251 LM[Oxidation]DHTIPEV True PC9_epitope_Rep4 1069.51139675145 1069.51028993586 51.05 2 0.1350099370988276 0.0008064516129032258 0.00426998365389246 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 101043 9746 SLGEISALTSK True H1975_Epitope_Rep1 1104.60265390356 1104.60154993586 42.417 2 0.13500795897355972 0.0008064516129032258 0.004270177793391193 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 55679 23203 LALFPGVAL True PC9_epitope_Rep2 899.5480395799099 899.5474949679301 94.733 1 0.13500667061336646 0.0008064516129032258 0.004270304241842373 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 26222 12019 FHDNSGDVF True PC9_epitope_Rep5 1036.4250238947598 1036.42392993586 51.226 2 0.13499641435761345 0.0008064516129032258 0.004271310992613578 ['ENSG00000132182|ENST00000254508|NUP210'] 111003 17943 THATQLLVL True PC9_epitope_Rep5 994.58113061334 994.58002993586 74.035 2 0.13499426626587796 0.0008064516129032258 0.0042715218782991655 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'IGSF9|p.R978Gfs*9|1|0.16|ENSG00000085552|chr1:159928456-159928456|T/-|frameshift_variant', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 72296 11139 MIDPSGVSY True H1975_Epitope_Rep3 967.4320834211501 967.43153496793 47.942 1 0.13498939695825835 0.0008064516129032258 0.004271999953353786 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 48364 19459 IYTFPHSAF True PC9_epitope_Rep1 1081.5232813840498 1081.52218993586 79.665 2 0.13498898335164852 0.0008064516129032258 0.004272040564232308 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 121067 4806 VEQVVKETP True H1975_Epitope_Rep3 1027.5549754351498 1027.5538699358601 23.615 2 0.13498667127538289 0.0008064516129032258 0.004272267587570953 ['ENSG00000155827|ENST00000389120|RNF20', 'RNF20|p.Q440Sfs*14|1|0.08|ENSG00000155827|chr9:101551726-101551727|-/T|frameshift_variant'] 31708 8045 GEGGSFVDA True H1975_Epitope_Rep2 837.3504619721699 837.3499149679301 35.896 1 0.1349862519797778 0.0008064516129032258 0.004272308759586267 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 26150 21090 FGYVDFESA True PC9_epitope_Rep1 1033.4392769765698 1033.43877496793 85.952 1 0.1349796661253483 0.0008064516129032258 0.0042729554977295366 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 26673 20163 FISPFGHGL True PC9_epitope_Rep1 973.5021520166499 973.50104993586 82.386 2 0.13497828048049265 0.0008064516129032258 0.0042730915818899404 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5', 'ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF'] 117957 4972 TYAEKLHRL True PC9_epitope_Rep4 1129.62439240765 1129.6227449037901 25.731 3 0.13497786097578363 0.0008064516129032258 0.004273132782285276 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 46692 5497 ITDTTRDVY True H1975_Epitope_Rep2 1082.52440358286 1082.5233099358602 26.157 2 0.1349766988527393 0.0008064516129032258 0.004273246918759579 ['ENSG00000161904|ENST00000293760|LEMD2'] 141255 4978 YTDHQNSSSYY True H1975_Epitope_Rep1 1363.5316737912701 1363.53056993586 24.223 2 0.13497488511702735 0.0008064516129032258 0.004273425058581506 ['ENSG00000125398|ENST00000245479|SOX9'] 74950 20113 NHMAVAFVL True PC9_epitope_Rep3 1000.5164221818 1000.51532993586 82.616 2 0.1349702183987999 0.0008064516129032258 0.0042738834437266214 ['ENSG00000164919|ENST00000520468|COX6C'] 106142 10965 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.46057496793 47.206 1 0.13495652084863496 0.0008064516129032258 0.004275229156529659 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 78606 14985 NYSPYVNYF True NCI_RA007_Epitope_Rep4 1165.50802524273 1165.5069299358602 65.11 2 0.134956243580632 0.0008064516129032258 0.0042752564009847695 ['ENSG00000156162|ENST00000414645|DPY19L4'] 2857 6032 AEVEPTPEA True H1975_Epitope_Rep3 941.4341915961298 941.43308993586 28.217 2 0.13495606348381822 0.0008064516129032258 0.004275274097455247 ['ENSG00000186834|ENST00000332499|HEXIM1'] 114320 21869 TPQSIFIFA True PC9_epitope_Rep4 1022.5436824754598 1022.5425899358601 92.328 2 0.13495572874700446 0.0008064516129032258 0.00427530698917962 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 9995 20165 AYPPAPFMHI True PC9_epitope_Rep1 1142.55828699378 1142.5571899358602 82.394 2 0.13494973089037812 0.0008064516129032258 0.004275896389627037 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 115722 8513 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 39.429 2 0.13494268826000697 0.0008064516129032258 0.004276588560881029 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 24026 9816 EYNKSWQTF True NCI_RA007_Epitope_Rep4 1201.5403880001697 1201.53928993586 44.606 2 0.13493867363621517 0.0008064516129032258 0.004276983179909825 ['ENSG00000198440|ENST00000333201|ZNF583'] 118488 16023 TYPYLQHEI True PC9_epitope_Rep3 1162.5658744720201 1162.56476993586 66.782 2 0.1349386434080076 0.0008064516129032258 0.004276986151339826 ['nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 99040 15100 SHFEGLITT True PC9_epitope_Rep3 1003.49746055903 1003.49636993586 63.219 2 0.134928389735428 0.0008064516129032258 0.004277994204064287 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 121073 10273 VEQWPYRAVA True H1975_Epitope_Rep2 1217.61930702721 1217.61820993586 44.521 2 0.1349255332265142 0.0008064516129032258 0.004278275073194874 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3', 'CCT3|p.Q442H|1|0.1|ENSG00000163468|chr1:156311025-156311025|C/A|missense_variant'] 97541 9242 SEEPLLHVA True H1975_Epitope_Rep2 993.51311062317 993.51200993586 40.505 2 0.1349223760844098 0.0008064516129032258 0.004278585523577761 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant'] 91620 13641 RIPDGVVSV True PC9_epitope_Rep5 940.5341804209199 940.53308993586 57.493 2 0.13491792697639732 0.0008064516129032258 0.0042790230542591135 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1'] 111409 18562 THSLPVVVI True PC9_epitope_Rep3 963.5753169569099 963.57420993586 76.619 2 0.13491716214715074 0.0008064516129032258 0.004279098272946621 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 6385 6634 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 30.491 2 0.13491243395987124 0.0008064516129032258 0.004279563305131623 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 4468 13292 AIVDKVPSV True PC9_epitope_Rep5 926.54368247546 926.54258993586 56.139 2 0.1349074029171106 0.0008064516129032258 0.004280058178925062 ['ENSG00000181789|ENST00000314797|COPG1'] 37764 18776 GYADIVQLL True NCI_RA007_Epitope_Rep4 990.5385970950199 990.53750993586 81.234 2 0.1349045924456534 0.0008064516129032258 0.004280334652914328 ['ENSG00000134996|ENST00000346234|OSTF1'] 128219 12165 VPNKFLVTA True PC9_epitope_Rep4 987.5753169569099 987.57420993586 54.609 2 0.13490164592473777 0.0008064516129032258 0.004280624529412287 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 105007 15977 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 66.447 3 0.13489971412813262 0.0008064516129032258 0.004280814588623491 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 6707 7861 AQAPDLQRV True PC9_epitope_Rep2 996.5352430500799 996.53414993586 35.605 2 0.13489512523459832 0.0008064516129032258 0.004281266098908779 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 90427 7100 REIKFTVQA True H1975_Epitope_Rep2 1090.61349337078 1090.6123899358602 32.24 2 0.1348940110102664 0.0008064516129032258 0.004281375736734897 ['ENSG00000109929|ENST00000264027|SC5D', 'ENST00000534455.5_1_11:121174081-121175207:+|nuORF', 'ENST00000531140.1_1_11:121174081-121177378:+|nuORF', 'ENST00000524683.5_1_11:121175009-121175207:+|nuORF'] 88153 15304 QRVDNIEVL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 63.876 2 0.13489351282412093 0.0008064516129032258 0.004281424758322393 ['ENSG00000197442|ENST00000359015|MAP3K5'] 126477 16592 VLLGKVYVV True PC9_epitope_Rep6 988.63210355704 988.63100993586 76.275 2 0.1348854366635825 0.0008064516129032258 0.004282219531009603 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 87993 13458 QRNPQGFVL True PC9_epitope_Rep1 1057.5668775315298 1057.56578993586 56.624 2 0.1348845845513401 0.0008064516129032258 0.004282303395633539 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 124935 16273 VHSEQVFAL True PC9_epitope_Rep3 1028.5290950404797 1028.5279899358602 67.732 2 0.13487469024479531 0.0008064516129032258 0.004283277309012509 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 40161 14502 HQDPQSIFV True PC9_epitope_Rep5 1069.51925863277 1069.5181699358602 60.782 2 0.1348670075878782 0.0008064516129032258 0.004284033676840939 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 45096 10293 IPLDPVAGYK True H1975_Epitope_Rep1 1071.5964463243097 1071.5953499358602 44.536 2 0.1348664384345179 0.0008064516129032258 0.004284089715996996 ['CON__P12763'] 9608 20689 AYALLLQHL True PC9_epitope_Rep1 1040.60186605792 1040.6007699358602 84.404 2 0.1348656801650665 0.0008064516129032258 0.004284164376753263 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF'] 43817 9926 IHSEPLGV True PC9_epitope_Rep5 850.45486747106 850.45376993586 43.152 2 0.13485999319044037 0.0008064516129032258 0.0042847243688331526 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 138607 6995 YIDQEELNK True PC9_epitope_Rep4 1150.5506183307 1150.5495299358602 34.153 2 0.1348589368122513 0.0008064516129032258 0.0042848283975538875 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 132602 20696 VVFEIQGTTV True PC9_epitope_Rep3 1091.58627556343 1091.5851699358602 84.881 2 0.13485876007195186 0.0008064516129032258 0.004284845802612768 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 108239 22853 SYIDVLPEF True PC9_epitope_Rep2 1081.53317736141 1081.53267496793 93.393 1 0.1348520570652895 0.0008064516129032258 0.004285505953896332 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 53134 11280 KPYESYIGA True PC9_epitope_Rep1 1026.5022115862998 1026.50110993586 48.268 2 0.13485042334328368 0.0008064516129032258 0.004285666867614956 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 87787 16371 QRDIQTLIL True PC9_epitope_Rep6 1098.63970811862 1098.6386099358601 75.357 2 0.1348494936358599 0.0008064516129032258 0.004285758441965288 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF'] 49305 3580 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 18.671 2 0.13484743088409806 0.0008064516129032258 0.004285961625852121 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 21802 9525 ERYKEVAEL True PC9_epitope_Rep3 1135.5873381925899 1135.58624993586 41.585 2 0.13484621255629087 0.0008064516129032258 0.0042860816372864395 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 76858 18403 NRDEMLVVL True PC9_epitope_Rep4 1087.5695799534699 1087.56848993586 78.854 2 0.13482664917234796 0.0008064516129032258 0.004288009183872588 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 26701 7693 FIVGADNVGSK True H1975_Epitope_Rep1 1105.57677350889 1105.57566993586 34.553 2 0.1348261667001738 0.0008064516129032258 0.004288056731842201 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 6648 18876 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 77.626 2 0.134821434299349 0.0008064516129032258 0.004288523140851016 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 67401 5348 LSSPATLNSR True NCI_RA007_Epitope_Rep5 1044.5563724174801 1044.55526993586 27.263 2 0.13481071258709473 0.0008064516129032258 0.004289580020969515 ['CON__P00761'] 54140 15925 KVPEWVDTV True PC9_epitope_Rep4 1071.5600608155898 1071.5589699358602 69.183 2 0.13481023926278352 0.0008064516129032258 0.004289626684282501 ['ENSG00000105372|ENST00000598742|RPS19'] 18103 14451 EIIDLVLDR True NCI_RA007_Epitope_Rep3 1084.61282466444 1084.61172993586 64.15 2 0.1348080037283199 0.0008064516129032258 0.00428984708422594 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 117275 15407 TVMDEIHTV True PC9_epitope_Rep5 1043.49574630687 1043.49464993586 64.272 2 0.13480634048266674 0.0008064516129032258 0.004290011069829481 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 93063 6784 RPNDIM[Oxidation]AEV True PC9_epitope_Rep6 1059.50189469691 1059.5007899358602 34.917 2 0.13479742873490208 0.0008064516129032258 0.0042908898177973775 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 88719 12874 QTHSVFVNV True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 54.53 2 0.13479613040356012 0.0008064516129032258 0.004291017855334367 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 8303 23398 ATIIQLFQV True PC9_epitope_Rep5 1031.6015317047497 1031.6004299358601 94.981 2 0.13479165739612495 0.0008064516129032258 0.004291458998784636 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 73028 17315 MRDITPNLL True PC9_epitope_Rep2 1071.57466533391 1071.5735699358602 71.86 2 0.13477868884108055 0.0008064516129032258 0.004292738255692196 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 78546 10857 NYQGHFHLF True NCI_RA007_Epitope_Rep4 1161.5355774032498 1161.5344899358602 48.612 2 0.1347782865579804 0.0008064516129032258 0.0042927779441175075 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 118726 13274 TYVENLRLL True NCI_RA007_Epitope_Rep4 1119.62880908175 1119.6277099358601 58.193 2 0.13477758053869365 0.0008064516129032258 0.004292847599407922 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 134572 19696 VYSEVAAYEF True PC9_epitope_Rep4 1176.5339056373998 1176.5333749679298 83.882 1 0.1347750087478676 0.0008064516129032258 0.004293101339644357 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 128863 9967 VQDNPRALV True PC9_epitope_Rep1 1010.5508931142199 1010.54978993586 43.202 2 0.13477492786424505 0.0008064516129032258 0.004293109320094065 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89'] 27049 17254 FLFELPSRL True H1975_Epitope_Rep2 1120.62808080576 1120.6269899358601 71.658 2 0.1347609528209931 0.0008064516129032258 0.004294488399299509 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 33918 7384 GLQVVAVK True NCI_RA007_Epitope_Rep2 812.5119884243599 812.51088993586 33.346 2 0.13475811606536156 0.0008064516129032258 0.004294768388210573 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30260216-30260456:-|nuORF', 'ENSG00000083457|ENST00000263087|ITGAE'] 134295 22722 VYNPVIYVF True PC9_epitope_Rep2 1112.5906326678798 1112.59007496793 92.896 1 0.1347558421076355 0.0008064516129032258 0.004294992841761702 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 77741 11158 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep1 1193.57505963717 1193.57396993586 47.888 2 0.13475526504974064 0.0008064516129032258 0.004295049802752178 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 24794 7455 FATHAAALSVR True PC9_epitope_Rep2 1142.6196413803798 1142.61799490379 34.05 3 0.1347524618638793 0.0008064516129032258 0.004295326513927591 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 77225 10251 NRVGDTITV True PC9_epitope_Rep3 973.5192586327701 973.51816993586 44.381 2 0.134744495722996 0.0008064516129032258 0.00429611297252635 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 17437 5829 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51766490379 27.816 3 0.13473896984828473 0.0008064516129032258 0.0042966585989713145 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 113749 17262 TMDVDLFSQY True H1975_Epitope_Rep2 1217.52744035797 1217.52634993586 71.69 2 0.13473228525622077 0.0008064516129032258 0.004297318728963974 ['ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33', 'ENST00000575153.5_1_17:5347527-5364435:-|nuORF'] 73040 12615 M[Oxidation]RDPIRILV True PC9_epitope_Rep6 1127.64849936095 1127.64685490379 59.982 3 0.13473144501329035 0.0008064516129032258 0.004297401713373566 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 72834 8291 MPNGDHIVSA True PC9_epitope_Rep2 1039.47567956863 1039.4745899358602 37.252 2 0.13472969402436008 0.0008064516129032258 0.004297574650330441 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 49349 9870 KESDVGFIP True H1975_Epitope_Rep3 990.5022115862998 990.50110993586 42.993 2 0.13472692123385002 0.0008064516129032258 0.004297848519891732 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-4|HBS1L'] 134107 20209 VYKVPPFTF True PC9_epitope_Rep2 1096.59571804832 1096.5946299358602 83.151 2 0.13472195282906002 0.0008064516129032258 0.004298339294212591 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 108698 13131 SYREDPIVY True PC9_epitope_Rep1 1140.5451390274397 1140.5440499358601 55.376 2 0.13472125859574505 0.0008064516129032258 0.004298407874328881 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 115485 9992 TRNPVSEEL True PC9_epitope_Rep5 1043.52473793603 1043.52364993586 43.409 2 0.13471596244014092 0.0008064516129032258 0.004298931092749902 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 95861 18290 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.62577490379 75.367 3 0.13471077487959848 0.0008064516129032258 0.0042994436438087424 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 62750 14996 LLLPGELAK True PC9_epitope_Rep6 952.5957180483199 952.59462993586 69.701 2 0.134702519730937 0.0008064516129032258 0.004300259408879098 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 43851 6176 IHSQPQPAL True PC9_epitope_Rep2 989.5294293936498 989.52832993586 29.147 2 0.13469909185451334 0.0008064516129032258 0.004300598192917689 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 95633 6388 RYASINTHL True NCI_RA007_Epitope_Rep4 1073.56179215109 1073.5606899358602 31.174 2 0.13468272585882154 0.0008064516129032258 0.004302216041109114 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 29773 19009 FVPEIFHRI True PC9_epitope_Rep1 1156.6393141958 1156.63765490379 77.906 3 0.1346801789572227 0.0008064516129032258 0.004302467867189326 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 34924 7257 GQNPTEAEL True NCI_RA007_Epitope_Rep3 957.44033960573 957.43924993586 35.656 2 0.1346794066383392 0.0008064516129032258 0.004302544233454431 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 54569 5606 KYISKPENL True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 28.358 2 0.13467661006697082 0.0008064516129032258 0.004302820767363136 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 78502 16475 NYPDEFTKL True PC9_epitope_Rep2 1125.53423999057 1125.5331499358601 68.612 2 0.13467395219208622 0.0008064516129032258 0.004303083602788062 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant', 'NF1|p.P1951Hfs*6|1|0.17|ENSG00000196712|chr17:31334876-31334876|C/-|frameshift_variant', 'NF1|p.E1929Sfs*13|1|0.24|ENSG00000196712|chr17:31330469-31330469|A/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'NF1|p.E1832*|1|0.19|ENSG00000196712|chr17:31327723-31327724|-/T|frameshift_variant', 'NF1|p.E318Kfs*11|1|0.07|ENSG00000196712|chr17:31200484-31200485|AG/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.L1411Sfs*17|1|0.08|ENSG00000196712|chr17:31258400-31258400|C/-|frameshift_variant', 'NF1|p.Q1360Sfs*20|1|0.19|ENSG00000196712|chr17:31249085-31249086|-/T|frameshift_variant', 'NF1|p.A1268Qfs*17|1|0.22|ENSG00000196712|chr17:31235703-31235703|G/-|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.G1160Vfs*6|1|0.31|ENSG00000196712|chr17:31232863-31232863|G/-|frameshift_variant', 'NF1|p.S637Vfs*51|1|0.23|ENSG00000196712|chr17:31225157-31225157|T/-|frameshift_variant', 'NF1|p.F1464Sfs*5|1|0.41|ENSG00000196712|chr17:31259088-31259088|T/-|frameshift_variant', 'nc|ENSG00000196712|P21359-5|NF1'] 58579 11834 LEQNIQLPAA True H1975_Epitope_Rep3 1095.59242357303 1095.59187496793 50.667 1 0.1346726447878539 0.0008064516129032258 0.004303212896913719 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 44196 22100 IIYPGAFVDL True PC9_epitope_Rep4 1106.60119735158 1106.60010993586 93.224 2 0.13466786293402613 0.0008064516129032258 0.004303685825115081 ['ENSG00000012174|ENST00000379484|MBTPS2'] 127096 9814 VLTEIIASR True NCI_RA007_Epitope_Rep2 1000.5916952970399 1000.59058993586 42.797 2 0.13466659293510425 0.0008064516129032258 0.00430381143739325 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 130090 13832 VSDMVEDLY True H1975_Epitope_Rep1 1069.4637774722498 1069.46327496793 58.352 1 0.13466551890871098 0.0008064516129032258 0.0043039176693657625 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 136850 13278 YADPGVSFY True H1975_Epitope_Rep1 1017.44436235701 1017.44377496793 56.175 1 0.1346612816064631 0.0008064516129032258 0.004304336806278318 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 76563 19911 NQLDSLM[Oxidation]GL True PC9_epitope_Rep5 1005.48009662317 1005.47898993586 81.643 2 0.13465496059864251 0.0008064516129032258 0.0043049621298885555 ['ENSG00000135148|ENST00000412615|TRAFD1'] 134482 8904 VYPSSLSKI True NCI_RA007_Epitope_Rep4 992.5542471591599 992.55314993586 41.079 2 0.1346378680425205 0.0008064516129032258 0.004306653508750582 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 107309 8479 SVLDSTAKV True PC9_epitope_Rep6 918.5022115863 918.50110993586 42.326 2 0.1346360671093221 0.0008064516129032258 0.004306831756720543 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 32878 9713 GHSGDVMSL True PC9_epitope_Rep2 901.3963666187701 901.39526993586 42.698 2 0.13462169468622728 0.0008064516129032258 0.0043082545332267805 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 111023 8280 THDDSHLVSL True PC9_epitope_Rep6 1122.5305515924601 1122.5289149037899 41.459 3 0.13461535708155647 0.0008064516129032258 0.004308882062359387 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 21155 11908 ERATNIEVL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 51.128 2 0.13461461253730225 0.0008064516129032258 0.004308955790649725 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 9214 4061 AVNAHSNILK True NCI_RA007_Epitope_Rep4 1065.59309227937 1065.59198993586 21.891 2 0.13460418144916517 0.0008064516129032258 0.004309988857283027 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF', 'ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 9500 6086 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 28.802 2 0.13460373970904063 0.0008064516129032258 0.004310032611422552 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 46709 5676 ITDVKPGNY True H1975_Epitope_Rep3 1005.51311062317 1005.51200993586 26.861 2 0.13460205523489108 0.0008064516129032258 0.004310199461774165 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'ENSG00000115318|ENST00000264094|LOXL3', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3'] 31584 12267 GEEMPGLSV True H1975_Epitope_Rep1 917.4164333570099 917.4158849679301 52.209 1 0.13460056403973664 0.0008064516129032258 0.004310347172798035 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 65507 10203 LRNDSYTL True PC9_epitope_Rep5 980.4927095317599 980.49160993586 44.235 2 0.13459536690865714 0.0008064516129032258 0.004310862016084709 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF', 'ENST00000496846.1_1_7:30411448-30411829:+|nuORF', 'ENST00000581764.1_1_17:61907522-61908306:+|nuORF'] 81369 9577 PLDHLKPLEY True H1975_Epitope_Rep2 1223.65502382959 1223.6533649037901 41.812 3 0.13459310189168933 0.0008064516129032258 0.004311086414411818 ['ENSG00000135763|ENST00000258243|URB2'] 65380 10840 LREDSTVSL True PC9_epitope_Rep3 1018.5294889633 1018.52838993586 46.668 2 0.1345895257604767 0.0008064516129032258 0.004311440730101623 ['ENSG00000120875|ENST00000240100|DUSP4'] 73091 21909 MRFLAATFL True PC9_epitope_Rep1 1068.57902243836 1068.57792993586 89.088 2 0.1345873846130048 0.0008064516129032258 0.004311652884330309 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 14117 15319 DSDAPLFY True H1975_Epitope_Rep2 926.4021631918599 926.4016149679301 64.082 1 0.13458474381984792 0.0008064516129032258 0.004311914559830042 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 125188 22083 VIIDQLPDL True PC9_epitope_Rep1 1024.580461907 1024.57936993586 89.754 2 0.13457827394155011 0.0008064516129032258 0.004312555724646679 ['ENSG00000070018|ENST00000261349|LRP6'] 28479 11715 FSDVDSPYY True H1975_Epitope_Rep2 1091.44475627983 1091.44417496793 50.137 1 0.13457267828425443 0.0008064516129032258 0.0043131103300990915 ['ENSG00000170779|ENST00000336219|CDCA4'] 89387 19155 QYAGKYVLF True PC9_epitope_Rep1 1087.57023157647 1087.56912993586 78.473 2 0.13456317282813018 0.0008064516129032258 0.004314052611028509 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 23416 4991 EVSSATNALR True NCI_RA007_Epitope_Rep1 1046.5356369729 1046.53452993586 23.498 2 0.13456091615409838 0.0008064516129032258 0.004314276346183956 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF'] 17770 18383 EHSLPTLGL True PC9_epitope_Rep1 965.51819600361 965.5176449679301 75.5 1 0.13455467523939899 0.0008064516129032258 0.004314895153612178 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 52703 8642 KMDDLNLHY True H1975_Epitope_Rep1 1147.53319444475 1147.53154490379 38.17 3 0.1345535129047738 0.0008064516129032258 0.004315010412633283 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 129283 19977 VQVPVPVTV True PC9_epitope_Rep2 936.5644179200399 936.56332993586 82.243 2 0.13454954752708984 0.0008064516129032258 0.004315403648911315 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 34982 21393 GQSELTLLL True PC9_epitope_Rep4 972.54916177872 972.54806993586 90.457 2 0.13454867250273617 0.0008064516129032258 0.004315490427585444 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 28471 12848 FSDPVYAEAY True H1975_Epitope_Rep3 1160.5026055091198 1160.50207496793 54.642 1 0.13454710308546708 0.0008064516129032258 0.00431564607551286 ['ENSG00000129083|ENST00000439561|COPB1'] 77213 18336 NRTELPLTL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 75.317 2 0.13454573806981454 0.0008064516129032258 0.004315781456290988 ['ENSG00000105447|ENST00000253237|GRWD1'] 45526 11394 IQQGETPGL True PC9_epitope_Rep1 941.4818104948898 941.48070993586 48.707 2 0.13454281463825474 0.0008064516129032258 0.004316071413183741 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143', 'ENST00000532305.1_1_11:9546777-9549157:+|nuORF'] 105579 7079 SSDKSGMIEY True H1975_Epitope_Rep3 1115.48049016555 1115.4793899358601 32.198 2 0.1345423947436664 0.0008064516129032258 0.004316113061481689 ['ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 40438 13570 HRAPIFMRV True PC9_epitope_Rep5 1125.62295293901 1125.6213149037899 57.22 3 0.13454134881719132 0.0008064516129032258 0.004316216806047963 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 96392 14424 RYYLKFNFL True NCI_RA007_Epitope_Rep4 1262.6811790077797 1262.68008993586 62.813 2 0.13452258340057732 0.0008064516129032258 0.004318078550366215 ['ENSG00000178695|ENST00000377474|KCTD12'] 33359 6497 GKTVISQSL True NCI_RA007_Epitope_Rep5 931.5338460677499 931.53274993586 31.657 2 0.13451461725826466 0.0008064516129032258 0.004318869122682557 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 26035 6001 FGHGAEDSL True NCI_RA007_Epitope_Rep3 931.40356017419 931.40246993586 30.582 2 0.1345092055865882 0.0008064516129032258 0.004319406266893412 ['ENSG00000173432|ENST00000356524|SAA1'] 32840 13084 GHNAIINTL True PC9_epitope_Rep3 951.5137793295102 951.51268993586 55.352 2 0.1345055542471964 0.0008064516129032258 0.004319768723748714 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 62188 19070 LLEPFVHQV True PC9_epitope_Rep3 1080.59678067748 1080.59568993586 78.576 2 0.13449113740353452 0.0008064516129032258 0.0043212001313995465 ['nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2', 'IP6K2|p.Y298Vfs*5|1|0.17|ENSG00000068745|chr3:48688662-48688663|-/C|frameshift_variant', 'ENSG00000068745|ENST00000328631|IP6K2'] 138279 12290 YHAQMPDSL True PC9_epitope_Rep2 1060.46478053176 1060.4636899358602 52.583 2 0.13448833435279423 0.0008064516129032258 0.00432147849275982 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 35409 6757 GSDKINYTY True H1975_Epitope_Rep3 1059.48728979815 1059.48618993586 30.943 2 0.13448291450031666 0.0008064516129032258 0.0043220167699453225 ['ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 120440 3740 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 19.46 2 0.1344828521997668 0.0008064516129032258 0.004322022957761428 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 8300 23465 ATIIQLFQV True PC9_epitope_Rep1 1031.6015317047497 1031.6004299358601 95.043 2 0.13447461139472136 0.0008064516129032258 0.004322841528226475 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 87907 13795 QRISEAYESL True PC9_epitope_Rep3 1194.5880664685797 1194.58696993586 58.14 2 0.1344707986917906 0.0008064516129032258 0.004323220301030023 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 42779 10296 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 44.609 2 0.13446803571026533 0.0008064516129032258 0.004323494809785388 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 35749 15430 GTIDEIQKL True PC9_epitope_Rep1 1015.5549754351499 1015.55386993586 64.17 2 0.13446553377777154 0.0008064516129032258 0.004323743397549565 ['ENSG00000167986|ENST00000301764|DDB1'] 23735 19902 EYFSYPVSL True PC9_epitope_Rep6 1103.51752729727 1103.51642993586 89.208 2 0.13446266562786713 0.0008064516129032258 0.004324028389416278 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 88173 15953 QRVPLSVQL True PC9_epitope_Rep2 1038.61857875122 1038.61748993586 66.61 2 0.134458549904944 0.0008064516129032258 0.004324437377976113 ['ENSG00000125826|ENST00000356286|RBCK1'] 54254 17548 KWNPTAGVAF True PC9_epitope_Rep2 1089.56072952193 1089.5596299358601 72.77 2 0.13445190663062803 0.0008064516129032258 0.004325097615536388 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 111634 15866 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.5641099358602 66.477 2 0.13444751841211017 0.0008064516129032258 0.004325533790406193 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 40964 8253 HTDGNNIYV True PC9_epitope_Rep5 1031.4672230599099 1031.4661299358602 36.686 2 0.13444041204771284 0.0008064516129032258 0.004326240232391539 ['ZNF800|p.I552*|1|0.23|ENSG00000048405|chr7:127373686-127373686|C/-|frameshift_variant', 'ENSG00000048405|ENST00000265827|ZNF800'] 65315 17077 LRDDTSFVF True PC9_epitope_Rep6 1098.53457434374 1098.53346993586 78.255 2 0.1344397857522564 0.0008064516129032258 0.004326302497735104 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 111079 11952 THDLVGPEL True PC9_epitope_Rep6 979.49746055903 979.49636993586 57.226 2 0.13443798977620572 0.0008064516129032258 0.00432648105585456 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 107718 5827 SVSDLAPPR True NCI_RA007_Epitope_Rep3 940.4977949122 940.49668993586 29.899 2 0.13443678950285068 0.0008064516129032258 0.0043266003925452 ['ENSG00000166295|ENST00000299381|ANAPC16'] 84270 17384 PYNPLWAQL True NCI_RA007_Epitope_Rep4 1100.5654805492 1100.5643899358602 75.282 2 0.13442865799606407 0.0008064516129032258 0.004327408949900042 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 138310 11372 YHDIAQQAF True PC9_epitope_Rep4 1091.50360856863 1091.5025099358602 51.516 2 0.1344272007482404 0.0008064516129032258 0.004327553867275982 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 141990 19942 YVITDLTQL True PC9_epitope_Rep6 1064.57537652656 1064.57426993586 89.367 2 0.1344206577006898 0.0008064516129032258 0.004328204605833189 ['ENSG00000134070|ENST00000256458|IRAK2'] 12739 7043 DLEGLSQR True NCI_RA007_Epitope_Rep2 916.46140940348 916.46030993586 32.019 2 0.13441742515474817 0.0008064516129032258 0.0043285261342283984 ['ENSG00000100345|ENST00000216181|MYH9'] 69275 20773 LTTLELLEV True PC9_epitope_Rep6 1029.5957776179698 1029.59468993586 92.667 2 0.13441693719384634 0.0008064516129032258 0.0043285746717931445 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 2775 8636 AETSPAPIP True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 38.176 1 0.1344143566619543 0.0008064516129032258 0.004328831366732363 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 134387 12192 VYPGDPLRF True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 55.088 2 0.13440871976506077 0.0008064516129032258 0.004329392141744614 ['ENSG00000170892|ENST00000396388|TSEN34'] 39247 15720 HIIENIVAV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 72.689 2 0.1344081057838422 0.0008064516129032258 0.004329453226726013 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 121257 6114 VETFSGVYKK True NCI_RA007_Epitope_Rep1 1156.6128246644398 1156.61116490379 27.819 3 0.13439967623188256 0.0008064516129032258 0.004330291968759832 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 137875 11308 YETLTITQA True H1975_Epitope_Rep2 1038.5233409536997 1038.52277496793 48.543 1 0.13438472915739313 0.0008064516129032258 0.004331779599997061 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 90654 12640 REQDIYLPIA True H1975_Epitope_Rep2 1216.6451874218799 1216.6440899358602 53.719 2 0.13438290727204444 0.0008064516129032258 0.004331960960515451 ['ENSG00000120837|ENST00000240055|NFYB'] 37897 16165 GYSEHFVEF True PC9_epitope_Rep6 1113.47672511445 1113.47562993586 74.531 2 0.13438110027262276 0.0008064516129032258 0.004332140846611763 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 71218 20084 LYPEGLAQL True PC9_epitope_Rep4 1002.5385970950199 1002.53807496793 85.387 1 0.13438063179071347 0.0008064516129032258 0.004332187485009246 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 48957 5316 KEELRLEEA True H1975_Epitope_Rep2 1115.58225281215 1115.5811499358601 25.499 2 0.13437984540673928 0.0008064516129032258 0.004332265772366209 ['GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 106852 6313 SVASPFTSK True NCI_RA007_Epitope_Rep5 922.4759968384601 922.47488993586 30.961 2 0.13437075114412422 0.0008064516129032258 0.004333171240452502 ['ENSG00000187527|ENST00000342358|ATP13A5', 'ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4'] 110614 18522 TFTFSHATF True PC9_epitope_Rep5 1057.4868958753298 1057.48578993586 76.269 2 0.13436924041609297 0.0008064516129032258 0.00433332167382478 ['ENSG00000204713|ENST00000377199|TRIM27'] 7137 5824 AQYDASELK True NCI_RA007_Epitope_Rep2 1023.48728979815 1023.4861899358599 27.272 2 0.1343686718959585 0.0008064516129032258 0.004333378286541675 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 74887 4564 NHHLQETSF True PC9_epitope_Rep6 1111.50467119779 1111.50356993586 24.816 2 0.13436351830929286 0.0008064516129032258 0.004333891509318921 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 27368 6444 FLTQTDTGDDR True NCI_RA007_Epitope_Rep2 1267.56805929999 1267.56696993586 29.674 2 0.13435866312425504 0.0008064516129032258 0.004334375070505474 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 105008 15693 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 65.371 3 0.13434459721270325 0.0008064516129032258 0.004335776291866367 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 74257 5488 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 26.122 2 0.13434244602234044 0.0008064516129032258 0.00433599062909146 ['ENSG00000167658|ENST00000309311|EEF2'] 72950 12890 MQDDNQVMV True PC9_epitope_Rep5 1078.44233083502 1078.44122993586 54.591 2 0.13433861177431872 0.0008064516129032258 0.004336372686345613 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 35833 11685 GTLEQWIEK True NCI_RA007_Epitope_Rep5 1102.56587447202 1102.56476993586 51.599 2 0.13433507462868674 0.0008064516129032258 0.004336725168800399 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 39224 18559 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 76.174 2 0.1343325607875442 0.0008064516129032258 0.004336975694453739 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 118724 17546 TYTVRTFAL True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 72.761 2 0.13432946784601338 0.0008064516129032258 0.0043372839519918655 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 9722 21943 AYGNVFSAF True PC9_epitope_Rep1 974.4497820906199 974.44868993586 89.222 2 0.13432408180888655 0.0008064516129032258 0.004337820802180459 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 21554 14472 ERNPTQFQL True PC9_epitope_Rep1 1131.5672714543498 1131.5661699358602 60.491 2 0.13432312590919016 0.0008064516129032258 0.004337916087793857 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12', 'PHF12|p.Q258Lfs*5|1|0.0|ENSG00000109118|chr17:28921751-28921752|-/TA|frameshift_variant', 'PHF12|p.Q258Kfs*12|1|0.0|ENSG00000109118|chr17:28921752-28921753|-/GCCATGACACATGCTTAAGATCTGTTTT|frameshift_variant'] 88176 15168 QRVPLSVQL True PC9_epitope_Rep4 1038.61857875122 1038.61748993586 66.27 2 0.13429246850836124 0.0008064516129032258 0.004340973162779376 ['ENSG00000125826|ENST00000356286|RBCK1'] 114952 11791 TQVEASEESAL True PC9_epitope_Rep5 1162.5353621893798 1162.53426993586 50.351 2 0.13429226798953436 0.0008064516129032258 0.004340993164986638 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 116879 16025 TVFDEAIRA True PC9_epitope_Rep1 1020.5240096600398 1020.52290993586 66.453 2 0.13429028304820392 0.0008064516129032258 0.004341191172289898 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 13 4220 AAAAAAALQAK True NCI_RA007_Epitope_Rep5 955.54507945779 955.5439899358599 22.771 2 0.13428473547247216 0.0008064516129032258 0.004341744616542297 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF'] 131647 5947 VTLTSEEEAR True PC9_epitope_Rep2 1133.5564319871298 1133.55532993586 28.266 2 0.13428311888346978 0.0008064516129032258 0.004341905905841307 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 106237 8185 STELNHLGY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 36.463 2 0.1342830109864608 0.0008064516129032258 0.0043419166710842545 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 87735 10706 QRALPSEEL True PC9_epitope_Rep5 1041.54547338061 1041.54436993586 46.17 2 0.13428189124104103 0.0008064516129032258 0.004342028393359614 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 29074 18192 FTHSQFIVV True PC9_epitope_Rep5 1076.5654805492 1076.5643899358602 74.985 2 0.13427773014696842 0.0008064516129032258 0.004342443590187288 ['ENSG00000136824|ENST00000374793|SMC2'] 93633 3946 RQQLQAHQL True NCI_RA007_Epitope_Rep4 1120.6101393258398 1120.6090499358602 21.415 2 0.13427618945465883 0.0008064516129032258 0.004342597331468292 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF'] 2251 5731 AENPKLISA True H1975_Epitope_Rep2 941.5181960036099 941.51708993586 27.042 2 0.1342722063771881 0.0008064516129032258 0.004342994816286524 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 98166 4780 SESSDVLPK True NCI_RA007_Epitope_Rep5 960.47639076128 960.47528993586 25.069 2 0.1342710690373504 0.0008064516129032258 0.004343108321881038 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 25521 7244 FEIATKEDP True H1975_Epitope_Rep1 1048.5076908895599 1048.5065899358601 32.874 2 0.13426973125294614 0.0008064516129032258 0.004343241835429326 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 71240 16047 LYPKTLFLL True NCI_RA007_Epitope_Rep3 1106.67396836902 1106.67286993586 70.806 2 0.13425680244834443 0.0008064516129032258 0.004344532364709677 ['PPP3CA|p.F239Lfs*64|1|0.32|ENSG00000138814|chr4:101093841-101093841|A/-|frameshift_variant', 'nc|ENSG00000138814|Q08209-5|PPP3CA', 'nc|ENSG00000138814|Q08209-3|PPP3CA', 'nc|ENSG00000138814|Q08209-2|PPP3CA', 'ENSG00000138814|ENST00000394854|PPP3CA'] 115036 15207 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 63.639 2 0.13424872459919673 0.0008064516129032258 0.004345338872766535 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 141933 19388 YVFPGVTRL True PC9_epitope_Rep2 1050.58621599378 1050.5851099358601 79.953 2 0.13424635364663706 0.0008064516129032258 0.004345575621305439 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 96179 7865 RYPDSHQLF True NCI_RA007_Epitope_Rep5 1161.55670677065 1161.5550749037902 36.948 3 0.13424595893352556 0.0008064516129032258 0.004345615036132013 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 43363 7139 IGAEVYHNLK True PC9_epitope_Rep2 1142.60840799034 1142.6067749037902 32.853 3 0.13424509242831295 0.0008064516129032258 0.004345701563891722 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 75730 24570 NLLDLLTEV True PC9_epitope_Rep3 1028.57537652656 1028.57426993586 99.87 2 0.1342374188026262 0.0008064516129032258 0.00434646791353689 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 97871 10458 SELPVSEVA True H1975_Epitope_Rep3 929.47057710485 929.47002496793 45.289 1 0.13422273114539643 0.0008064516129032258 0.0043479351125714156 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 7646 20081 ASIDILHSI True PC9_epitope_Rep3 967.5338460677501 967.53274993586 82.493 2 0.13422261532832142 0.0008064516129032258 0.004347946683867763 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 57983 4653 LEHAISPSA True H1975_Epitope_Rep3 923.47124581119 923.47014993586 23.021 2 0.1342208039573839 0.0008064516129032258 0.004348127662087811 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'ENST00000585274.1_1_17:79974599-79974746:+|nuORF', 'ENST00000578236.5_1_17:79966858-79974746:+|nuORF', 'ENST00000577733.5_1_17:79966858-79975195:+|nuORF', 'ENST00000578361.5_1_17:79969964-79975195:+|nuORF'] 7945 7738 ATATANQIILK True NCI_RA007_Epitope_Rep1 1142.66592286646 1142.66482993586 34.092 2 0.13421872400853993 0.0008064516129032258 0.00434833548371424 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 40858 11254 HSELLEDYY True H1975_Epitope_Rep1 1167.50841916555 1167.50732993586 48.265 2 0.13421276159401208 0.0008064516129032258 0.004348931282849636 ['ENSG00000117528|ENST00000370214|ABCD3'] 74852 18745 NHFPGSFQI True PC9_epitope_Rep3 1045.49812926537 1045.4970299358602 77.325 2 0.13420491185642583 0.0008064516129032258 0.004349715797176018 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 74150 9073 NEDLRSWTA True H1975_Epitope_Rep1 1090.50433684462 1090.5032299358602 39.804 2 0.13420067191727134 0.0008064516129032258 0.004350139601044428 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 97531 9090 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 39.915 1 0.13417384841528124 0.0008064516129032258 0.004352821693778326 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 27233 22023 FLPDPSALQNL True PC9_epitope_Rep5 1213.6342883850098 1213.6331899358602 89.738 2 0.13417251557250215 0.0008064516129032258 0.004352955007828007 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 31863 7945 GELERALSA True H1975_Epitope_Rep3 944.4927095317598 944.49160993586 35.53 2 0.13417151564517923 0.0008064516129032258 0.004353055025541959 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'GOLGA2|p.R293Tfs*17|1|0.13|ENSG00000167110|chr9:128263064-128263067|TCTC/-|frameshift_variant', 'ENSG00000186399|ENST00000327271|GOLGA8R', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'ENSG00000261739|ENST00000562295|GOLGA8S', 'ENSG00000178115|ENST00000562783|GOLGA8Q'] 104850 6464 SRAPSQVSI True PC9_epitope_Rep2 943.50869394907 943.50758993586 30.277 2 0.134168189474461 0.0008064516129032258 0.004353387742037921 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2', 'nc|ENSG00000166833|Q8IVL1-7|NAV2'] 21646 14056 ERSDIVVQI True PC9_epitope_Rep4 1057.5767735088898 1057.57566993586 61.976 2 0.134157506402374 0.0008064516129032258 0.004354456538390154 ['ENSG00000041802|ENST00000265245|LSG1', 'LSG1|p.V181E|1|0.3|ENSG00000041802|chr3:194660113-194660113|A/T|missense_variant'] 96317 21852 RYSIAFPLL True PC9_epitope_Rep1 1078.61751612206 1078.61640993586 88.863 2 0.1341468412706384 0.0008064516129032258 0.004355523798266224 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 25735 7112 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 32.288 2 0.1341456553873961 0.0008064516129032258 0.004355642485569665 ['ENSG00000084774|ENST00000264705|CAD'] 137154 9035 YAVGGYTRL True H1975_Epitope_Rep2 998.5185303567799 998.51742993586 39.705 2 0.1341408659552396 0.0008064516129032258 0.004356121861019401 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 75686 23504 NLIDLDDLYV True PC9_epitope_Rep5 1191.6023195503901 1191.6012299358601 95.39 2 0.13413095976997358 0.0008064516129032258 0.004357113538826056 ['ENSG00000125676|ENST00000245838|THOC2'] 8544 9580 ATVAVPLVGK True NCI_RA007_Epitope_Rep2 953.5909670210499 953.58986993586 41.878 2 0.1341299621230757 0.0008064516129032258 0.0043572134225466335 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 17602 12692 EHINEGETAML True PC9_epitope_Rep3 1242.55505208814 1242.5539499358601 53.844 2 0.1341206941996656 0.0008064516129032258 0.004358141428697546 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 75211 12262 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 52.249 2 0.13412030324666904 0.0008064516129032258 0.004358180579488366 ['ENSG00000116285|ENST00000377482|ERRFI1'] 134036 8262 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5287299358602 41.378 2 0.13411873216335543 0.0008064516129032258 0.004358337914317453 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 38318 5795 HEGPGSELP True H1975_Epitope_Rep3 921.4192102383299 921.41810993586 27.314 2 0.13411648543974694 0.0008064516129032258 0.004358562920323125 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1'] 125189 21981 VIIDQLPDL True PC9_epitope_Rep3 1024.580461907 1024.57936993586 89.851 2 0.13411186785690432 0.0008064516129032258 0.004359025400334426 ['ENSG00000070018|ENST00000261349|LRP6'] 40674 11100 HRQTEVFTL True PC9_epitope_Rep2 1129.58800689893 1129.5869099358601 48.02 2 0.13409812772385926 0.0008064516129032258 0.004360401847768338 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 25436 8017 FEDVVNQSSPK True PC9_epitope_Rep2 1248.59863115228 1248.5975299358602 36.198 2 0.13409784371564165 0.0008064516129032258 0.0043604303034288985 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 139152 14030 YLDTVPEVY True H1975_Epitope_Rep2 1097.52809198097 1097.52757496793 59.117 1 0.13409431006247483 0.0008064516129032258 0.004360784366383694 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 96752 20502 SAMEVVPAL True PC9_epitope_Rep5 915.4735543103099 915.47244993586 83.9 2 0.13409341093920651 0.0008064516129032258 0.004360874460750754 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 35945 6066 GTTAVFINK True NCI_RA007_Epitope_Rep3 949.5232813840499 949.52218993586 30.842 2 0.13409104676300437 0.0008064516129032258 0.004361111365799428 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.S538Lfs*13|1|0.1|ENSG00000116539|chr1:155481257-155481257|G/-|frameshift_variant'] 87984 13925 QRNEVVVEL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 58.398 2 0.1340842473806794 0.0008064516129032258 0.004361792776690436 ['ENSG00000186432|ENST00000334256|KPNA4'] 109090 17631 TALLKIEGV True PC9_epitope_Rep1 942.57498260374 942.5744349679301 72.61 1 0.1340827356825777 0.0008064516129032258 0.004361944288194927 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 97697 7355 SEIDMSVKA True H1975_Epitope_Rep1 978.46919720586 978.46808993586 33.3 2 0.13407531124657374 0.0008064516129032258 0.004362688485383 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 134888 10330 VYVQNVVKL True NCI_RA007_Epitope_Rep3 1060.6280808057597 1060.6269899358601 47.697 2 0.13407356459121142 0.0008064516129032258 0.004362863581674455 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 98968 20980 SHAVFQIIL True PC9_epitope_Rep1 1026.58621599378 1026.5851099358601 85.525 2 0.1340720529895959 0.0008064516129032258 0.0043630151202223785 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A', 'KIF2B|p.S423Y|1|0.28|ENSG00000141200|chr17:53824301-53824301|C/A|missense_variant', 'KIF2B|p.K434N|1|0.26|ENSG00000141200|chr17:53824335-53824335|G/T|missense_variant', 'ENSG00000141200|ENST00000268919|KIF2B', 'KIF2B|p.E599*|1|0.34|ENSG00000141200|chr17:53824825-53824826|-/T|frameshift_variant'] 133741 15682 VYDTVFKHF True PC9_epitope_Rep5 1154.5760452328998 1154.5744049037899 65.332 3 0.13407128485572567 0.0008064516129032258 0.004363092127880755 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 78647 17653 NYTLVSHLI True PC9_epitope_Rep6 1058.5760452329 1058.57494993586 80.541 2 0.1340599106685426 0.0008387854386847844 0.004364232580319794 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 224 21082 AAFPGASLYL True PC9_epitope_Rep4 1008.5280324113198 1008.52692993586 89.253 2 0.13405858519239852 0.0008387854386847844 0.004364365500606782 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 132208 16908 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 70.28 2 0.1340584380366967 0.0008387854386847844 0.004364380257797905 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 26897 20794 FLDGNELTL True PC9_epitope_Rep4 1020.51277627 1020.51227496793 88.132 1 0.13404592264121643 0.0008387854386847844 0.004365635517399108 ['ENSG00000213719|ENST00000375784|CLIC1'] 109734 4511 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 22.463 2 0.13404569567269822 0.0008387854386847844 0.004365658285004366 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 25484 8586 FEFDTKTSA True NCI_RA007_Epitope_Rep2 1044.47639076128 1044.47528993586 38.041 2 0.13404210980992065 0.0008387854386847844 0.004366018004665562 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 113646 16657 TLVYHVVGV True PC9_epitope_Rep1 985.5596668927699 985.55856993586 68.9 2 0.13404089049307 0.0008387854386847844 0.004366140328405622 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 77383 9537 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.46057496793 41.656 1 0.1340381535053659 0.0008387854386847844 0.004366414919537404 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 137327 15087 YDGIILPGK True PC9_epitope_Rep5 974.54368247546 974.54258993586 63.039 2 0.13403207744866744 0.0008387854386847844 0.004367024567159272 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 133643 17022 VYAILTHGI True PC9_epitope_Rep4 985.5596668927699 985.55856993586 73.468 2 0.1340231107964417 0.0008387854386847844 0.004367924399253076 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 26239 11827 FHEGDAYVV True PC9_epitope_Rep2 1035.4661604307498 1035.4650699358601 50.823 2 0.13402135090428466 0.0008387854386847844 0.004368101031517521 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 1864 12026 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.4856749679301 51.419 1 0.1340194785437008 0.0008387854386847844 0.004368288959460317 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 1975 12058 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47456993586 51.392 2 0.1340190598271277 0.0008387854386847844 0.004368330986935865 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 105795 14459 SSIEHLTTL True PC9_epitope_Rep3 999.52367530687 999.52256993586 60.722 2 0.13401018870776546 0.0008387854386847844 0.00436922149391814 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF', 'HUWE1|p.V474Cfs*21|1|0.25|ENSG00000086758|chrX:53627479-53627480|-/A|frameshift_variant'] 3019 20032 AFMKGVFTF True PC9_epitope_Rep4 1046.5259242363397 1046.52482993586 85.189 2 0.1340091983595658 0.0008387854386847844 0.004369320918869996 ['ENST00000489739.1_1_9:139685858-139686514:+|nuORF', 'TMEM141|p.S28L|1|0.13|ENSG00000244187|chr9:136791739-136791739|C/T|missense_variant', 'ENST00000465017.5_1_9:139685862-139687281:+|nuORF', 'ENSG00000244187|ENST00000290079|TMEM141'] 1957 7114 AEINHSFTP True H1975_Epitope_Rep3 1014.47705946762 1014.47596993586 32.334 2 0.1340083498210768 0.0008387854386847844 0.004369406108763567 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 34922 7794 GQNPTEAEL True NCI_RA007_Epitope_Rep2 957.44033960573 957.43924993586 34.945 2 0.13400783706432282 0.0008387854386847844 0.004369457588299492 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 120170 4153 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 21.073 2 0.13400655293615318 0.0008387854386847844 0.004369586514283957 ['ENSG00000155506|ENST00000518297|LARP1'] 11905 19552 DHLLSVSL True PC9_epitope_Rep1 882.4810822189 882.47998993586 80.031 2 0.13399795551643903 0.0008387854386847844 0.004370449788716498 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 120576 7483 VEGQLEFR True H1975_Epitope_Rep3 976.4977949121999 976.49668993586 33.764 2 0.13399678744982654 0.0008387854386847844 0.004370567088295556 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 91413 18616 RHIEIFTDL True PC9_epitope_Rep5 1142.6084079903399 1142.6067749037902 76.633 3 0.13399253265257502 0.0008387854386847844 0.004370994389798496 ['ENSG00000079246|ENST00000392132|XRCC5'] 99108 17310 SHIFEVQAL True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 74.584 2 0.1339893943287962 0.0008387854386847844 0.004371309592338012 ['ENSG00000124201|ENST00000396105|ZNFX1'] 97659 4726 SEGQRPQLTAA True H1975_Epitope_Rep2 1156.58364979448 1156.58254993586 23.272 2 0.13398715824494128 0.0008387854386847844 0.004371534190663719 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 132818 18458 VVLGEFGVRNV True PC9_epitope_Rep2 1187.6662572196299 1187.6651699358601 76.332 2 0.13398537270139535 0.0008387854386847844 0.004371713543678269 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 24599 20616 FAIDPHLLLSV True PC9_epitope_Rep6 1223.69140933831 1223.6903099358601 92.03 2 0.13398029862492025 0.0008387854386847844 0.004372223260569368 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 141405 16132 YTELEAIMY True H1975_Epitope_Rep1 1131.5158130451098 1131.51527496793 67.395 1 0.1339729228918191 0.0008387854386847844 0.004372964295232201 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 49257 10038 KEQEWSMAV True H1975_Epitope_Rep2 1106.5066453437398 1106.50554993586 43.602 2 0.13396896790592155 0.0008387854386847844 0.004373361700912499 ['nc|ENSG00000122126|Q01968-2|OCRL', 'ENSG00000122126|ENST00000371113|OCRL'] 107153 15943 SVIEQGGIQTV True PC9_epitope_Rep3 1129.59790287629 1129.5968099358602 66.471 2 0.13396637963354635 0.0008387854386847844 0.004373621795510397 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 21303 12861 EREKWIHAL True PC9_epitope_Rep3 1180.63529144452 1180.6336349037902 54.488 3 0.13396537172601786 0.0008387854386847844 0.004373723083920539 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 68335 16114 LTELPDWSYA True H1975_Epitope_Rep2 1193.56045473841 1193.5593499358602 67.194 2 0.13396502963284762 0.0008387854386847844 0.004373757462673349 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 26236 8808 FHDSAVTSV True PC9_epitope_Rep5 961.45051036661 961.44940993586 38.825 2 0.13395558192151272 0.0008387854386847844 0.004374707018584876 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 1977 12059 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 51.467 2 0.13394838875909545 0.0008387854386847844 0.004375430114226381 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 8918 13901 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6971299358602 58.307 2 0.13394350464412016 0.0008387854386847844 0.004375921159157626 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 86152 9837 QIDPTIQRV True PC9_epitope_Rep4 1068.5927579262 1068.5916699358602 45.487 2 0.13394292180660983 0.0008387854386847844 0.004375979760797656 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 17540 18369 EHGNFLITV True PC9_epitope_Rep2 1028.52909504048 1028.52857496793 75.986 1 0.1339399510591862 0.0008387854386847844 0.004376278467869999 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 87519 21241 QQHSILLLL True PC9_epitope_Rep3 1063.6389798426299 1063.6378899358601 86.996 2 0.1339363795641601 0.0008387854386847844 0.0043766376064356665 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 111106 14259 THEDGVLEL True PC9_epitope_Rep2 1011.48728979815 1011.48618993586 60.113 2 0.13392131857525796 0.0008387854386847844 0.004378152413220891 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 74847 18738 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 76.865 2 0.1339193429721216 0.0008387854386847844 0.004378351154168194 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 40495 13754 HRDSGILGL True PC9_epitope_Rep1 966.5246783663799 966.52358993586 57.75 2 0.1339130402410027 0.0008387854386847844 0.004378985253354231 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 11609 5520 DGGAWGTEQR True NCI_RA007_Epitope_Rep2 1075.46828568907 1075.46718993586 26.087 2 0.13391266321280396 0.0008387854386847844 0.004379023187922251 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 37105 11726 GVPSTAIREI True PC9_epitope_Rep4 1041.5818588893299 1041.5807699358602 52.864 2 0.1339103756558378 0.0008387854386847844 0.004379253356667058 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 37995 14676 HALGLLYHV True PC9_epitope_Rep2 1021.5709002828102 1021.56980993586 61.716 2 0.13390934224703913 0.0008387854386847844 0.004379357339810053 ['ENSG00000181789|ENST00000314797|COPG1'] 115717 8596 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.5853349679301 39.849 1 0.13390902047511344 0.0008387854386847844 0.004379389717481257 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 73096 19524 MRFLAATFL True PC9_epitope_Rep6 1068.57902243836 1068.57792993586 87.762 2 0.13390742358150795 0.0008387854386847844 0.004379550405275469 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 134206 19208 VYLTDPQGL True PC9_epitope_Rep2 1004.5178616504397 1004.51676993586 79.257 2 0.1339070188463957 0.0008387854386847844 0.004379591132765577 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK', 'ENST00000464499.5_1_16:70501260-70504246:+|nuORF'] 7561 9127 ASELKALGY True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 40.059 2 0.13390653584589737 0.0008387854386847844 0.004379639736396531 ['ENSG00000176102|ENST00000323959|CSTF3'] 53894 7736 KTLTGKTITL True PC9_epitope_Rep4 1074.6648602373 1074.66376993586 37.147 2 0.13390610507938155 0.0008387854386847844 0.0043796830842476615 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 21740 9304 ERTNIQVTV True PC9_epitope_Rep4 1058.57202248162 1058.57092993586 43.396 2 0.1338981383871938 0.0008387854386847844 0.004380484845431103 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.G1211W|1|0.07|ENSG00000156535|chr6:73811076-73811076|G/T|missense_variant'] 65314 18161 LRDDTSFVF True PC9_epitope_Rep4 1098.53457434374 1098.53346993586 77.92 2 0.1338957366150214 0.0008387854386847844 0.004380726586175846 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 71854 15038 MELITPISA True H1975_Epitope_Rep3 973.5154191222899 973.51432993586 63.237 2 0.13389473978107386 0.0008387854386847844 0.004380826922365136 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 58562 7469 LEQLSPVRA True H1975_Epitope_Rep2 1011.5712942056299 1011.57018993586 33.678 2 0.13389243461196 0.0008387854386847844 0.004381058957545177 ['ENSG00000116213|ENST00000270708|WRAP73'] 87427 16129 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.4631649679301 67.188 1 0.133889950805447 0.0008387854386847844 0.004381308987698845 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 136898 10108 YAEVGRVL True PC9_epitope_Rep6 905.4970666362099 905.49596993586 49.488 2 0.13388554366479835 0.0008387854386847844 0.004381752663222572 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 142570 21373 YYLNEIQSF True PC9_epitope_Rep5 1175.5498900547097 1175.5487899358602 87.272 2 0.13387840619123706 0.0008387854386847844 0.004382471300799561 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 2577 10205 AEQVPELEA True H1975_Epitope_Rep2 984.4763907612798 984.47528993586 44.259 2 0.13387801946944192 0.0008387854386847844 0.004382510241262472 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 52628 19703 KLPSETIFVGC True PC9_epitope_Rep5 1192.61619579272 1192.6150899358602 80.835 2 0.13387452623557144 0.0008387854386847844 0.004382862003511698 ['ENSG00000179409|ENST00000319004|GEMIN4'] 42395 6596 IEDFRQATA True H1975_Epitope_Rep3 1049.51417325233 1049.5130699358601 30.325 2 0.13386065082105802 0.0008387854386847844 0.004384259507522276 ['ENSG00000167264|ENST00000565263|DUS2'] 12690 12659 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.56027496793 53.746 1 0.1338419282529581 0.0008387854386847844 0.004386145904260347 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 88826 21442 QVADILFQTA True PC9_epitope_Rep5 1104.5815245361598 1104.5804299358601 87.532 2 0.13383862023737167 0.0008387854386847844 0.0043864792874089694 ['ENSG00000114491|ENST00000232607|UMPS', 'UMPS|p.I201Lfs*14|1|0.09|ENSG00000114491|chr3:124737857-124737858|-/CTCCTGG|frameshift_variant'] 97129 19099 SDLRMLDSL True PC9_epitope_Rep3 1048.52229540788 1048.52118993586 78.687 2 0.13383785432701076 0.0008387854386847844 0.004386556479730376 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 135086 7916 WEDFKQNTP True H1975_Epitope_Rep1 1163.5247379360299 1163.52364993586 35.401 2 0.1338328164761363 0.0008387854386847844 0.0043870642532440164 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 14137 8463 DSDGAQDYY True H1975_Epitope_Rep3 1032.3672342351201 1032.3666749679298 37.537 1 0.13383052830409461 0.0008387854386847844 0.00438729490113319 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000562988.5_1_16:2052496-2059683:-|nuORF', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 126070 6385 VLEGM[Oxidation]EVVR True NCI_RA007_Epitope_Rep2 1046.5430312328997 1046.54192993586 29.444 2 0.13382507481817293 0.0008387854386847844 0.004387844661119057 ['ENSG00000166794|ENST00000300026|PPIB'] 40051 8662 HPTENLIASA True PC9_epitope_Rep2 1051.52982331647 1051.5287299358602 38.684 2 0.13382276177890598 0.0008387854386847844 0.004388077856626011 ['ENSG00000196981|ENST00000330689|WDR5B'] 40460 9704 HRDERVLSL True PC9_epitope_Rep5 1123.60980497267 1123.60816490379 42.294 3 0.1338173730637814 0.0008387854386847844 0.004388621182418309 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 76962 6898 NRDVPNETL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 33.757 2 0.13381662598628669 0.0008387854386847844 0.004388696512937914 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.V235A|1|0.18|ENSG00000205339|chr11:9417126-9417126|T/C|missense_variant', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 37587 12910 GVVPTIQKV True PC9_epitope_Rep1 939.5753169569098 939.57420993586 54.531 2 0.13381190667051301 0.0008387854386847844 0.0043891724080711 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 287 13038 AAGSPVFL True H1975_Epitope_Rep2 760.41194002992 760.41139496793 55.27 1 0.13380887715298576 0.0008387854386847844 0.0043894779310294325 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 9686 11069 AYGFVARI True NCI_RA007_Epitope_Rep5 895.4915873329498 895.49048993586 49.211 2 0.13380304965474768 0.0008387854386847844 0.004390065685774449 ['ENSG00000110799|ENST00000261405|VWF', 'VWF|p.N911Ifs*9|1|0.28|ENSG00000110799|chr12:6031534-6031534|C/-|frameshift_variant', 'ENST00000321023.5_1_12:6204574-6232125:-|nuORF', 'nc|ENSG00000110799|P04275-2|VWF'] 95826 15699 RYIPTAAAF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 65.395 2 0.13380109915856997 0.0008387854386847844 0.004390262427916184 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 140172 16318 YQTEIGQTL True PC9_epitope_Rep3 1051.51858992643 1051.51748993586 67.904 2 0.1337942243119662 0.0008387854386847844 0.0043909559475478685 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 53054 12693 KPNPNQIISV True PC9_epitope_Rep3 1108.62405805448 1108.62296993586 53.848 2 0.13379323863991616 0.0008387854386847844 0.0043910553888706644 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 96224 20486 RYPTSIASLAF True PC9_epitope_Rep3 1224.65027280232 1224.64916993586 84.058 2 0.1337885689170891 0.0008387854386847844 0.004391526532584946 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 54850 21689 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 88.255 2 0.13378305895404635 0.0008387854386847844 0.004392082515065968 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 99864 14419 SILPAIFQK True NCI_RA007_Epitope_Rep2 1015.6066170851899 1015.60552993586 60.749 2 0.1337747105723358 0.0008387854386847844 0.0043929250403753955 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 39242 18622 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 76.655 2 0.1337726899304887 0.0008387854386847844 0.004393128989128945 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 76989 20791 NRGDFFMTL True PC9_epitope_Rep3 1099.51206507735 1099.5109699358602 85.244 2 0.1337691009004419 0.0008387854386847844 0.004393491262512774 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 13971 7497 DRDPASGTAL True PC9_epitope_Rep3 1001.47778774361 1001.47668993586 33.84 2 0.13376890287588775 0.0008387854386847844 0.00439351125178692 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 32818 9801 GHLEKAVVL True PC9_epitope_Rep1 964.5705659296399 964.56946993586 42.561 2 0.13376566986259775 0.0008387854386847844 0.004393837615874308 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 98224 4057 SETSGIARP True NCI_RA007_Epitope_Rep5 916.4614094034799 916.46030993586 22.048 2 0.13376554904115787 0.0008387854386847844 0.004393849812940879 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 54975 9210 KYQEVTNNL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 40.372 2 0.13376386549204447 0.0008387854386847844 0.004394019772682358 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 64807 5042 LQDAEIAR True NCI_RA007_Epitope_Rep2 914.4821448480599 914.48104993586 24.236 2 0.1337576090659075 0.0008387854386847844 0.004394651436044896 ['ENSG00000197956|ENST00000368719|S100A6'] 7611 16277 ASFNDTFVHV True PC9_epitope_Rep6 1135.5298233164701 1135.5287299358602 74.971 2 0.13375392647859066 0.0008387854386847844 0.004395023280539632 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 762 10108 AAVPRAAFL True H1975_Epitope_Rep3 914.5337864980999 914.53268993586 43.921 2 0.13374802056713192 0.0008387854386847844 0.004395619687146421 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 88143 7368 QRSQTQTIL True PC9_epitope_Rep1 1073.58292151849 1073.58182993586 33.154 2 0.13374308552276357 0.0008387854386847844 0.004396118112301685 ['ENSG00000164151|ENST00000296564|ICE1'] 132206 16724 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 69.577 2 0.13374159931941926 0.0008387854386847844 0.004396268225452714 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 140753 13373 YSDEEELLY True H1975_Epitope_Rep2 1159.4921003950699 1159.4910099358601 56.572 2 0.13373787231538553 0.0008387854386847844 0.0043966446916940015 ['nc|ENSG00000042317|Q9P0W8-3|SPATA7', 'ENST00000556666.5_1_14:88883017-88904763:+|nuORF', 'nc|ENSG00000042317|Q9P0W8-2|SPATA7', 'SPATA7|p.H578Ifs*18|1|0.05|ENSG00000042317|chr14:88438352-88438353|-/CATATCCAAAGCCT|frameshift_variant', 'ENSG00000042317|ENST00000393545|SPATA7'] 104686 6460 SQTSVAERL True PC9_epitope_Rep2 989.5141732523299 989.51306993586 30.262 2 0.13373021268604998 0.0008387854386847844 0.004397418493952232 ['ENSG00000171456|ENST00000375687|ASXL1'] 18441 18671 EIYKEFFEV True PC9_epitope_Rep6 1202.58594121026 1202.5848499358601 84.462 2 0.13372572306716873 0.0008387854386847844 0.004397872113260955 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 47625 13753 IVYPKPTWL True H1975_Epitope_Rep2 1115.63791721347 1115.63682993586 58.046 2 0.1337252407423307 0.0008387854386847844 0.004397920848843688 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44', 'ENSG00000155275|ENST00000389737|TRMT44'] 5000 20700 ALHSWFQTL True PC9_epitope_Rep5 1101.5607295219302 1101.5596299358601 84.68 2 0.1337188635408501 0.0008387854386847844 0.0043985652709766605 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 9461 5298 AVVGVVAGGGR True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 27.072 2 0.13371449183613357 0.0008387854386847844 0.004399007089634886 ['ENSG00000161016|ENST00000528957|RPL8'] 115706 8050 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.751 2 0.1336953635841005 0.0008387854386847844 0.004400940767930538 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 3926 10778 AHDDSVM[Oxidation]YL True PC9_epitope_Rep2 1065.44371111445 1065.4426099358602 46.775 2 0.13369294110129973 0.0008387854386847844 0.004401185716969568 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 95354 20408 RVVDLITNL True PC9_epitope_Rep3 1041.6182443980501 1041.6171499358602 83.752 2 0.1336922700405841 0.0008387854386847844 0.004401253573567822 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF', 'HUWE1|p.V474Cfs*21|1|0.25|ENSG00000086758|chrX:53627479-53627480|-/A|frameshift_variant'] 68323 16026 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.52277496793 66.979 1 0.13369214645995187 0.0008387854386847844 0.004401266069958477 ['ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 92777 19557 RPADVIFATV True PC9_epitope_Rep3 1087.60259433391 1087.6014899358602 80.46 2 0.13369152028820072 0.0008387854386847844 0.004401329388564214 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 110955 16427 THADYVLEM True PC9_epitope_Rep3 1077.48009624273 1077.47898993586 68.323 2 0.1336909932260527 0.0008387854386847844 0.0044013826858849536 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 77326 13607 NSDVSLLNY True H1975_Epitope_Rep2 1023.48728979815 1023.48677496793 57.478 1 0.13368594478036863 0.0008387854386847844 0.00440189322460896 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 130994 10088 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.5340749679299 43.741 1 0.1336843308036064 0.0008387854386847844 0.004402056455021959 ['ENSG00000197081|ENST00000356956|IGF2R'] 23849 12925 EYIPKWEQF True NCI_RA007_Epitope_Rep3 1238.5971746003 1238.5960699358602 58.106 2 0.13367962096248717 0.0008387854386847844 0.004402532821501082 ['ENSG00000114405|ENST00000462069|C3orf14'] 34871 9058 GQLDTPGVHNV True PC9_epitope_Rep4 1135.56218607391 1135.56108993586 42.423 2 0.1336754417746378 0.0008387854386847844 0.004402955558824008 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 28933 10368 FTDPGQVAY True H1975_Epitope_Rep1 996.4552613938799 996.45471496793 44.829 1 0.13367377831919144 0.0008387854386847844 0.004403123833451803 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 102864 12507 SPAAPVITA True PC9_epitope_Rep3 825.45961849833 825.4590749679301 53.133 1 0.1336708490771688 0.0008387854386847844 0.004403420170078259 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 7326 11060 ARPPGYEF True PC9_epitope_Rep1 935.45011644379 935.44900993586 47.431 2 0.13366743921377813 0.0008387854386847844 0.004403765153532349 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 87753 14618 QRAWTVEQL True PC9_epitope_Rep4 1129.5880068989297 1129.5869099358601 64.159 2 0.13365318760117254 0.0008387854386847844 0.004405207309556635 ['ENSG00000100442|ENST00000396062|FKBP3'] 29865 12851 FVTFDDHD True PC9_epitope_Rep5 994.40322582102 994.40212993586 54.441 2 0.13365306991687517 0.0008387854386847844 0.004405219220262508 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 142109 12138 YVPETVYRV True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 58.038 2 0.13364878815810774 0.0008387854386847844 0.004405652594246556 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 24481 7441 FAEGQGRAL True PC9_epitope_Rep1 947.4824792012298 947.48138993586 33.437 2 0.13364777565601985 0.0008387854386847844 0.0044057550797957845 ['ENSG00000103335|ENST00000301015|PIEZO1'] 53255 11297 KQGDPIMTV True PC9_epitope_Rep1 987.5059170677499 987.50480993586 48.334 2 0.13364692823783808 0.0008387854386847844 0.004405840857346227 ['nc|ENSG00000168778|Q96GX1-2|TCTN2', 'ENSG00000168778|ENST00000303372|TCTN2'] 76403 12238 NQDDSILKV True PC9_epitope_Rep4 1030.5294889632999 1030.52838993586 54.891 2 0.1336460472760969 0.0008387854386847844 0.004405930031997434 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 77543 11090 NTDLGNDLY True H1975_Epitope_Rep3 1023.4509042894299 1023.4498099358599 47.75 2 0.1336363995567576 0.0008387854386847844 0.004406906731277262 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 73041 18346 MRDPIRILV True PC9_epitope_Rep1 1111.65358436095 1111.65248993586 75.357 2 0.1336336431932193 0.0008387854386847844 0.004407185814525522 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 106637 5335 STSNSFNLK True NCI_RA007_Epitope_Rep3 996.48762415132 996.48652993586 27.993 2 0.13362682386283226 0.0008387854386847844 0.0044078763502432335 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 21412 17227 ERINNINIL True PC9_epitope_Rep5 1097.61930702721 1097.61820993586 71.281 2 0.13362047310155084 0.0008387854386847844 0.0044085195339600685 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 75729 24444 NLLDLLTEV True PC9_epitope_Rep2 1028.57537652656 1028.5748749679299 99.598 1 0.13361649738363712 0.0008387854386847844 0.004408922228418223 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 96870 12773 [Acetylation]-SASVVSVISR True H1975_Epitope_Rep1 1045.57677382519 1045.57566993586 54.192 2 0.13361520051647044 0.0008387854386847844 0.004409053593984552 ['ENSG00000129562|ENST00000250498|DAD1'] 67419 5874 LSSPATLNSR True PC9_epitope_Rep6 1044.5563724174801 1044.55526993586 30.838 2 0.13361012103614803 0.0008387854386847844 0.004409568154811433 ['CON__P00761'] 32330 21397 GFGFILFK True PC9_epitope_Rep2 927.5218248320699 927.52072993586 87.774 2 0.1336096530706172 0.0008387854386847844 0.004409615563573309 ['nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB', 'HNRNPAB|p.D120G|1|0.63|ENSG00000197451|chr5:178205991-178205991|A/G|missense_variant', 'ENST00000406003.2_1_12:10264431-10264902:+|nuORF'] 31171 11718 GAYGKVFLV True H1975_Epitope_Rep3 952.5382031721999 952.53710993586 50.214 2 0.13360317224963272 0.0008387854386847844 0.004410272175826338 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'RPS6KA5|p.S448Vfs*9|1|0.24|ENSG00000100784|chr14:90900145-90900145|T/-|frameshift_variant', 'ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 137124 7979 YASSANLHLPK True PC9_epitope_Rep4 1199.62987171091 1199.62822490379 38.136 3 0.13359819980676807 0.0008387854386847844 0.00441077603032784 ['CON__P34955'] 9275 7709 AVPTNIIAAK True NCI_RA007_Epitope_Rep4 996.5967806774798 996.59568993586 36.323 2 0.13359788074799345 0.0008387854386847844 0.004410808362291634 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 89419 17424 QYASLMHSF True PC9_epitope_Rep5 1082.48551597634 1082.4844099358602 72.022 2 0.13359720704271316 0.0008387854386847844 0.004410876633286164 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 15407 19716 EAITHLLGV True PC9_epitope_Rep1 951.5389314481898 951.53782993586 80.663 2 0.13359541466758032 0.0008387854386847844 0.0044110582715443354 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 26893 21497 FLDGNELTL True PC9_epitope_Rep2 1020.51277627 1020.51166993586 88.158 2 0.13359475640653973 0.0008387854386847844 0.004411124981190157 ['ENSG00000213719|ENST00000375784|CLIC1'] 14967 13403 DYFEQYGK True PC9_epitope_Rep3 1048.4501760134401 1048.44906993586 56.587 2 0.13359416907619456 0.0008387854386847844 0.004411184503401101 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 124711 16946 VHAEEVIVL True PC9_epitope_Rep1 1007.5651461960299 1007.56404993586 70.007 2 0.133588873998463 0.0008387854386847844 0.004411721161778991 ['ENSG00000120733|ENST00000314358|KDM3B'] 90156 5906 REDFKTAVV True H1975_Epitope_Rep2 1063.56620882519 1063.5651099358602 27.704 2 0.1335868613688584 0.0008387854386847844 0.004411925159542058 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-4|EFCAB11', 'ENST00000555070.1_1_14:89878823-90420935:-|nuORF'] 11987 16522 DHQLIQEAL True PC9_epitope_Rep1 1065.54547338061 1065.54436993586 68.376 2 0.1335844749570346 0.0008387854386847844 0.004412167055491822 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 9870 11652 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 52.579 2 0.1335767973748062 0.0008387854386847844 0.004412945373762229 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 70827 5899 LYDATYETK True H1975_Epitope_Rep3 1102.5182555732601 1102.51714993586 27.701 2 0.13357295491373486 0.0008387854386847844 0.004413334955809955 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 20536 5658 EPQYPVRSA True PC9_epitope_Rep4 1045.5192586327698 1045.5181699358602 28.565 2 0.1335666411601337 0.0008387854386847844 0.0044139751726394606 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 96018 21015 RYLPDTLLL True PC9_epitope_Rep1 1102.63864548946 1102.63754993586 85.663 2 0.13356511710577013 0.0008387854386847844 0.004414129726016655 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 25391 15525 FEDDAIQLV True H1975_Epitope_Rep2 1048.50769088956 1048.5065899358601 64.872 2 0.1335650047569994 0.0008387854386847844 0.0044141411194448905 ['ENSG00000085840|ENST00000371568|ORC1'] 96212 14415 RYPTSIASL True PC9_epitope_Rep2 1006.5447451046199 1006.54364993586 60.716 2 0.13356355947311097 0.0008387854386847844 0.004414287690065098 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 9517 5688 AVVVVDDR True PC9_epitope_Rep4 871.4763311916298 871.4752299358599 28.693 2 0.13356317899161416 0.0008387854386847844 0.0044143262766455854 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 91005 6935 RFEEKHAYF True PC9_epitope_Rep2 1225.5880068989297 1225.58635490379 32.077 3 0.13355297716796677 0.0008387854386847844 0.004415361020031234 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 65376 14429 LRDYTQINV True PC9_epitope_Rep5 1120.58767254576 1120.58656993586 60.5 2 0.1335512786818454 0.0008387854386847844 0.0044155333161247316 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF'] 98300 6646 SEVPVTASA True H1975_Epitope_Rep2 859.42871229287 859.42816496793 30.471 1 0.13354581382894773 0.0008387854386847844 0.004416087721162034 ['ENST00000420416.1_3_10:14920949-14938948:+|nuORF', 'ENST00000313519.9_2_10:14920918-14938948:+|nuORF'] 114563 20048 TQDAVPLTL True PC9_epitope_Rep3 956.51786165044 956.51676993586 82.364 2 0.13354480501131835 0.0008387854386847844 0.0044161900724287925 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 21873 12976 ESDFSNPLY True H1975_Epitope_Rep1 1070.4556553167 1070.45507496793 54.99 1 0.1335412842016991 0.0008387854386847844 0.004416547300352326 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 61755 5716 LLAGPPGTGK True H1975_Epitope_Rep3 909.52836676449 909.52726993586 27.015 2 0.1335394556597365 0.0008387854386847844 0.004416732838886563 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 135111 9669 WEEETVPTT True H1975_Epitope_Rep2 1090.4818700645399 1090.48076993586 42.173 2 0.1335374094857476 0.0008387854386847844 0.004416940469230573 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 134483 12391 VYPSSLSKI True PC9_epitope_Rep2 992.5542471591599 992.55314993586 52.97 2 0.13353677998230268 0.0008387854386847844 0.004417004348442023 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 115348 20588 TRIGVMSLI True PC9_epitope_Rep5 988.5739370579199 988.57282993586 84.239 2 0.13353577292397686 0.0008387854386847844 0.004417106542140251 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 105326 17842 SRPPLLGF True PC9_epitope_Rep2 885.50723739709 885.50614993586 73.929 2 0.13353316940782903 0.0008387854386847844 0.00441737075109976 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 84913 11838 QEDKPSPLLF True H1975_Epitope_Rep1 1172.607739284 1172.60664993586 50.532 2 0.13353265145482177 0.0008387854386847844 0.004417423315654491 ['ENSG00000112144|ENST00000676107|CILK1'] 90828 9321 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.54912993586 40.85 2 0.13353038277760124 0.0008387854386847844 0.004417653560045321 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 27390 22833 FLVPTFEQL True PC9_epitope_Rep2 1092.5855472874398 1092.5844499358602 93.316 2 0.13351155527114875 0.0008387854386847844 0.004419564790268473 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 28490 16023 FSDVMEDLY True H1975_Epitope_Rep3 1117.4637774722498 1117.46268993586 67.089 2 0.13351029412903548 0.0008387854386847844 0.0044196928413089516 ['ENSG00000167325|ENST00000300738|RRM1'] 99100 9296 SHHENLVSF True PC9_epitope_Rep2 1068.49885754136 1068.49776993586 41.097 2 0.1335078849959548 0.0008387854386847844 0.004419937464677068 ['ENSG00000128791|ENST00000262120|TWSG1'] 24119 14756 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep5 1300.57578791316 1300.57468993586 61.758 2 0.1335067097502584 0.0008387854386847844 0.004420056803970988 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 5138 20828 ALLPHLYTL True PC9_epitope_Rep5 1039.60661708519 1039.6055299358602 85.164 2 0.13350263317441805 0.0008387854386847844 0.00442047078093282 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 104295 21058 SQIISLQTL True PC9_epitope_Rep5 1001.5757108797301 1001.57517496793 86.059 1 0.13350152362317813 0.0008387854386847844 0.004420583462671148 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 140368 10856 YRDPYTGQSV True PC9_epitope_Rep2 1184.5462016566 1184.5451099358602 47.076 2 0.1335009767709453 0.0008387854386847844 0.004420638999914381 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 76808 4829 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 25.158 2 0.1334985254988453 0.0008387854386847844 0.004420887954774502 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 24337 18201 EYVSQHLVF True PC9_epitope_Rep1 1120.5553097883198 1120.5542099358602 74.8 2 0.13349400569070385 0.0008387854386847844 0.004421347029519744 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 40648 11910 HRNGGLITL True PC9_epitope_Rep5 979.55631284783 979.55520993586 50.809 2 0.13348446287733717 0.0008387854386847844 0.004422316443000588 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 111523 20992 TIAEGLTLAQV True PC9_epitope_Rep1 1114.62338934814 1114.6228749679299 85.571 1 0.1334803151678182 0.0008387854386847844 0.0044227378564067315 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 44074 22476 IILPEDIEL True PC9_epitope_Rep2 1053.59577761797 1053.59468993586 91.943 2 0.13347906109477153 0.0008387854386847844 0.004422865279879559 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 106316 6356 STFSAPLNK True NCI_RA007_Epitope_Rep5 963.50254593947 963.50144993586 31.124 2 0.13347856348350734 0.0008387854386847844 0.004422915842017436 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 111051 15055 THDGSILIV True PC9_epitope_Rep2 953.51819600361 953.51708993586 63.167 2 0.13347853054535821 0.0008387854386847844 0.004422919188873452 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 76440 15775 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 65.497 2 0.13347423718565243 0.0008387854386847844 0.004423355459937561 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 134830 22198 VYVDDIYVI True PC9_epitope_Rep3 1097.56447748969 1097.5633899358602 90.67 2 0.13347369296559047 0.0008387854386847844 0.00442341076405837 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 6908 13592 AQIGSYVHV True PC9_epitope_Rep1 972.50288029264 972.50178993586 57.137 2 0.13346988973585358 0.0008387854386847844 0.0044237972706500026 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 134925 20200 VYWKIYNSI True PC9_epitope_Rep3 1184.6229954253197 1184.62188993586 82.959 2 0.1334587496146245 0.0008387854386847844 0.004424929587104716 ['ENSG00000115524|ENST00000335508|SF3B1'] 129694 11941 VRPPVQVY True PC9_epitope_Rep3 956.5443511817998 956.54324993586 50.952 2 0.13345548437566152 0.0008387854386847844 0.004425261530305746 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 121158 8123 VESAYEVIK True NCI_RA007_Epitope_Rep1 1036.5440763982797 1036.5429699358601 35.595 2 0.1334546276119594 0.0008387854386847844 0.0044253486327125915 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 65302 11288 LRAPASSCESL True PC9_epitope_Rep5 1132.55465816532 1132.5535699358602 48.412 2 0.13344539000851333 0.0008387854386847844 0.0044262878759986765 ['ENST00000336273.7_1_8:98656420-98656720:+|nuORF'] 4339 16559 AIKEILTQV True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 68.516 2 0.1334450992121262 0.0008387854386847844 0.00442631744622789 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1'] 23880 10790 EYIRSLNQF True NCI_RA007_Epitope_Rep5 1168.58767254576 1168.58656993586 48.138 2 0.133438112253578 0.0008387854386847844 0.00442702798809691 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 132210 17094 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 71.001 2 0.1334360841106686 0.0008387854386847844 0.004427234262070241 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 105703 11190 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep3 1170.4539414449798 1170.45337496793 48.141 1 0.13343138277257094 0.0008387854386847844 0.004427712452069359 ['ENSG00000115758|ENST00000234111|ODC1'] 87890 8284 QRIDSDDAL True PC9_epitope_Rep1 1031.4883524273098 1031.48724993586 36.698 2 0.1334311852461027 0.0008387854386847844 0.004427732544312061 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 41470 19111 HYLDTTTLI True PC9_epitope_Rep3 1075.55497543515 1075.5538699358601 78.734 2 0.13342917452103722 0.0008387854386847844 0.004427937078861362 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 62135 4087 LLEGEESR True PC9_epitope_Rep4 931.4610750503099 931.45996993586 22.015 2 0.13342895046952058 0.0008387854386847844 0.004427959870359549 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 74310 17096 NELESYAYSLK True PC9_epitope_Rep2 1315.62959692739 1315.6284899358602 71.009 2 0.13341807880264459 0.0008387854386847844 0.0044290659228496876 ['ENSG00000044574|ENST00000324460|HSPA5'] 54814 8114 KYPDRVPVI True NCI_RA007_Epitope_Rep5 1085.62332977849 1085.62222993586 37.896 2 0.13341730283706826 0.0008387854386847844 0.0044291448778039175 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 73337 9700 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4690749679298 42.295 1 0.13341048194894572 0.0008387854386847844 0.004429838966944146 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 44222 4475 IKIIAPPERK True NCI_RA007_Epitope_Rep5 1163.73902823707 1163.7373949037901 23.864 3 0.1334100776879569 0.0008387854386847844 0.004429880107648154 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 4031 20478 AHFPINVVI True PC9_epitope_Rep5 1008.5756513100799 1008.57507496793 83.808 1 0.13340851568616738 0.0008387854386847844 0.004430039072492928 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 73118 22279 MRLLSFVVL True PC9_epitope_Rep2 1076.64162269492 1076.64052993586 91.173 2 0.1334083220857457 0.0008387854386847844 0.004430058775590281 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|159|15.39|0.31|5.63|-|0|SSR2,None|1'] 120521 16454 VEFLEPLEA True H1975_Epitope_Rep1 1045.5331773614098 1045.53267496793 68.653 1 0.13340164094701074 0.0008387854386847844 0.0044307387812575665 ['ENSG00000122965|ENST00000261741|RBM19'] 127033 9882 VLSIGDGIAR True NCI_RA007_Epitope_Rep1 999.5712942056299 999.57018993586 42.441 2 0.1334005930987635 0.0008387854386847844 0.0044308454404951595 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 74783 14983 NHDSRLWSL True PC9_epitope_Rep5 1126.55195574338 1126.55084993586 62.636 2 0.13339894215894513 0.0008387854386847844 0.004431013492852677 ['ENSG00000118898|ENST00000345988|PPL'] 5264 17995 ALPSKLPTF True PC9_epitope_Rep2 972.56441792004 972.56332993586 74.521 2 0.13339521803028823 0.0008387854386847844 0.0044313926022057715 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 1980 12340 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 52.55 2 0.1333950460722386 0.0008387854386847844 0.004431410107987531 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 14158 13406 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.4579299358602 56.679 2 0.13338745222508125 0.0008387854386847844 0.0044321832496456 ['ENSG00000149823|ENST00000279281|VPS51'] 17317 19630 EHALLAYTL True PC9_epitope_Rep1 1029.5494961318898 1029.54838993586 80.332 2 0.13338679700682693 0.0008387854386847844 0.004432249964694947 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 103371 3000 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 15.536 2 0.13336917389048997 0.0008387854386847844 0.004434044741705726 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 21121 12925 ERALQQYTL True PC9_epitope_Rep2 1120.5876725457601 1120.58656993586 55.011 2 0.13336400865421127 0.0008387854386847844 0.004434570916621808 ['ENSG00000181789|ENST00000314797|COPG1'] 12710 7093 DLEAHIDSANK True PC9_epitope_Rep3 1211.57823006087 1211.57659490379 32.291 3 0.13335722531984043 0.0008387854386847844 0.004435262018354128 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 28006 19791 FQLRSFDQL True PC9_epitope_Rep2 1152.5927579261997 1152.5916699358602 81.515 2 0.1333513992336621 0.0008387854386847844 0.004435855678262999 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 39063 9965 HHSNLIAGM True PC9_epitope_Rep1 978.47053461854 978.46942993586 43.194 2 0.13334923327066572 0.0008387854386847844 0.004436076403089449 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 93515 17132 RQLDMELVSV True PC9_epitope_Rep6 1188.61725842188 1188.6161699358602 78.483 2 0.13334472862116312 0.0008387854386847844 0.004436535489024228 ['ENSG00000089902|ENST00000262241|RCOR1'] 133339 18828 VVVDPIQSV True PC9_epitope_Rep2 954.53859709502 954.53750993586 77.791 2 0.13334165434952933 0.0008387854386847844 0.00443684882663037 ['ENSG00000115233|ENST00000409682|PSMD14'] 15076 15274 DYSSILQKF True NCI_RA007_Epitope_Rep5 1099.55497543515 1099.5538699358601 65.444 2 0.13333836748617306 0.0008387854386847844 0.0044371838562779105 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 39481 16294 HLDLGILYY True H1975_Epitope_Rep1 1105.58079626017 1105.5802749679299 68.028 1 0.13333194461631998 0.0008387854386847844 0.004437838610791638 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 39838 3885 HNTIVEINNHK True NCI_RA007_Epitope_Rep2 1317.67894716165 1317.67729490379 19.748 3 0.13333122699345942 0.0008387854386847844 0.004437911771986002 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 21698 12211 ERSLNTDVL True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 51.956 2 0.13332138838701058 0.0008387854386847844 0.004438914931658689 ['ENSG00000140829|ENST00000268482|DHX38', 'ENST00000569935.1_1_16:72137048-72138114:+|nuORF', 'DHX38|p.G697Wfs*16|1|0.29|ENSG00000140829|chr16:72104557-72104558|-/T|frameshift_variant'] 89881 8244 RAYDGTTYL True H1975_Epitope_Rep2 1058.50327421546 1058.5021699358601 36.664 2 0.13331644779714782 0.0008387854386847844 0.004439418766290026 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 49109 4758 KEIKIVSA True NCI_RA007_Epitope_Rep4 886.5487678558999 886.54766993586 24.735 2 0.13331400847586405 0.0008387854386847844 0.004439667545760085 ['nc|ENSG00000155792|Q8TB45-2|DEPTOR', 'ENSG00000155792|ENST00000286234|DEPTOR'] 138290 8827 YHDDDNSVL True PC9_epitope_Rep5 1076.44106788172 1076.43996993586 38.898 2 0.1333071542070497 0.0008387854386847844 0.004440366666852881 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 8921 12805 AVFPSIVGRPR True PC9_epitope_Rep2 1197.69822605425 1197.6965849037902 54.556 3 0.13330650395412935 0.0008387854386847844 0.0044404329969322445 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 74856 18541 NHFPGSFQI True PC9_epitope_Rep5 1045.49812926537 1045.4970299358602 76.34 2 0.13330539269207528 0.0008387854386847844 0.004440546355241511 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 95949 6245 RYLENGKETL True PC9_epitope_Rep2 1221.6353510141698 1221.6337049037902 29.419 3 0.13329981740792293 0.0008387854386847844 0.004441115125383522 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 41554 20871 HYSPIYLSF True PC9_epitope_Rep1 1125.5494961318898 1125.54838993586 85.106 2 0.13329698736801895 0.0008387854386847844 0.004441403863227064 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 99283 9213 SHQTGVVAL True PC9_epitope_Rep5 910.4872302284999 910.48612993586 40.384 2 0.1332963183031682 0.0008387854386847844 0.004441472127989783 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 88003 13551 QRNPQGFVL True PC9_epitope_Rep5 1057.5668775315298 1057.56578993586 57.147 2 0.13328696270020388 0.0008387854386847844 0.004442426789667922 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 119032 15069 VAFSPVTEL True H1975_Epitope_Rep2 961.51204799401 961.51149496793 63.113 1 0.13326889575414066 0.0008387854386847844 0.004444270944641731 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 53860 14664 KTIEDDLVSA True PC9_epitope_Rep5 1089.55536935797 1089.55426993586 61.408 2 0.1332620202223838 0.0008387854386847844 0.004444972952068061 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 24130 23118 EYPFILDAF True PC9_epitope_Rep4 1113.5382627418498 1113.5371699358602 97.143 2 0.13326179527944682 0.0008387854386847844 0.00444499592110141 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 141409 16112 YTELEAIMY True H1975_Epitope_Rep3 1131.5158130451098 1131.51527496793 67.433 1 0.13325645816511003 0.0008387854386847844 0.004445540930807485 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 96966 9293 SAYDGKDYIA True PC9_epitope_Rep4 1101.49785448185 1101.4967499358602 43.352 2 0.1332454231520424 0.0008387854386847844 0.004446668001492414 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 53282 5708 KQKVDSLL True NCI_RA007_Epitope_Rep4 929.5545815123298 929.55348993586 28.57 2 0.133245384946703 0.0008387854386847844 0.004446671904117731 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF', 'ENST00000556181.1_1_14:58988389-58988443:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 141831 6413 YVDGVEVH True NCI_RA007_Epitope_Rep1 916.42904664604 916.4279499358599 28.971 2 0.13324217783975117 0.0008387854386847844 0.004446999517934169 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 37848 19251 GYLPNQLFRTF True PC9_epitope_Rep6 1354.70337100434 1354.7022699358602 86.699 2 0.13323715074458725 0.0008387854386847844 0.0044475130959138855 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 47766 24079 IYEPNFIFF True PC9_epitope_Rep1 1188.5855472874398 1188.5844499358602 97.432 2 0.13323476439272305 0.0008387854386847844 0.004447756910818444 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 134084 18937 VYKPVSIYL True PC9_epitope_Rep5 1080.6219327961599 1080.62082993586 77.864 2 0.1332323939218538 0.0008387854386847844 0.004447999116207714 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 88497 20167 QSVDLVFPV True PC9_epitope_Rep6 1002.5385970950199 1002.53807496793 90.246 1 0.1332301991772945 0.0008387854386847844 0.00444822337817462 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 142856 13742 YYTDIM[Oxidation]HTL True PC9_epitope_Rep4 1171.5219614351497 1171.5208699358602 60.756 2 0.13322795163071843 0.0008387854386847844 0.004448453047083582 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 88180 14415 QRVPLSVQL True PC9_epitope_Rep6 1038.61857875122 1038.61748993586 67.345 2 0.1332263656091889 0.0008387854386847844 0.004448615124106436 ['ENSG00000125826|ENST00000356286|RBCK1'] 72048 18325 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.5514299358601 76.799 2 0.13322461686778714 0.0008387854386847844 0.004448793836378062 ['ENSG00000198712|ENST00000361739|MT-CO2'] 21467 15158 ERLGQFM[Oxidation]TL True PC9_epitope_Rep2 1109.55393026977 1109.55282993586 63.563 2 0.1332174943775856 0.0008387854386847844 0.0044495217909871305 ['ENSG00000113739|ENST00000265087|STC2'] 117170 22327 TVLEQVLPI True PC9_epitope_Rep1 1010.6011973515798 1010.60010993586 90.695 2 0.1332135166499917 0.0008387854386847844 0.004449928386051478 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 98307 9201 SEVQYIQEA True H1975_Epitope_Rep1 1065.4978544818498 1065.49727496793 40.298 1 0.13321150646996038 0.0008387854386847844 0.004450133876426884 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 114923 11202 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 47.97 2 0.133202858252592 0.0008387854386847844 0.004451018046027236 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 90353 6963 REFSGYVES True NCI_RA007_Epitope_Rep4 1072.4825387708797 1072.4814499358602 33.409 2 0.13320091814049256 0.0008387854386847844 0.004451216421470757 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 32166 13617 GEVLMVQV True NCI_RA007_Epitope_Rep3 873.4629896266098 873.4624449679301 60.862 1 0.13320025025953325 0.0008387854386847844 0.004451284713966268 ['ENSG00000120948|ENST00000240185|TARDBP'] 97843 11704 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42816496793 53.151 1 0.13319700914561333 0.0008387854386847844 0.004451616140635832 ['ENSG00000126247|ENST00000246533|CAPNS1'] 115752 15394 TSDDPWLTAY True H1975_Epitope_Rep3 1167.5084191655499 1167.5078749679299 64.623 1 0.13319078889607408 0.0008387854386847844 0.00445225227304714 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 133345 17017 VVVDPIQSV True PC9_epitope_Rep6 954.53859709502 954.53750993586 78.01 2 0.1331825792776471 0.0008387854386847844 0.004453091991499682 ['ENSG00000115233|ENST00000409682|PSMD14'] 21673 5562 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 26.224 2 0.13317359272234028 0.0008387854386847844 0.004454011357834619 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 24545 4523 FAGDDAPRA True NCI_RA007_Epitope_Rep5 918.4195445915 918.4184499358599 24.052 2 0.13317238370458817 0.0008387854386847844 0.004454135060253912 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 104503 20745 SQMPTVIYV True PC9_epitope_Rep3 1036.5263181591597 1036.52577496793 85.063 1 0.13317184140040222 0.0008387854386847844 0.004454190548000789 ['ENSG00000121931|ENST00000369763|LRIF1'] 48698 15849 KAYTSQFVSL True PC9_epitope_Rep2 1142.5971746003 1142.5960699358602 66.222 2 0.1331708406760087 0.0008387854386847844 0.004454292942402532 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT1|p.V504L|1|0.07|ENSG00000198380|chr2:69329771-69329771|C/A|missense_variant'] 73451 12303 M[Oxidation]VAPAVASV True PC9_epitope_Rep5 859.4473399429099 859.44679496793 52.314 1 0.13315995049215565 0.0008387854386847844 0.004455407379223162 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 22497 11930 ETFSYPESY True H1975_Epitope_Rep3 1121.4553209635299 1121.4542299358602 51.044 2 0.13314620622538872 0.0008387854386847844 0.004456814278602845 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 115410 19396 TRLPEFSEL True PC9_epitope_Rep3 1090.56587447202 1090.56476993586 79.83 2 0.13314376695935404 0.0008387854386847844 0.004457064014092545 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 84152 21955 PYFNAPVYL True PC9_epitope_Rep3 1082.5436824754597 1082.5425899358602 89.75 2 0.133141565769113 0.0008387854386847844 0.004457289386896749 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 9743 13018 AYHELAQVY True PC9_epitope_Rep3 1092.5240096600398 1092.52290993586 55.103 2 0.13312994281151622 0.0008387854386847844 0.004458479610637217 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3'] 48700 16647 KAYTSQFVSL True PC9_epitope_Rep5 1142.5971746003 1142.5960699358602 69.038 2 0.13312891875664526 0.0008387854386847844 0.0044585844917805675 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT1|p.V504L|1|0.07|ENSG00000198380|chr2:69329771-69329771|C/A|missense_variant'] 78260 11534 NYIDKVRFL True NCI_RA007_Epitope_Rep5 1166.64479349906 1166.64313490379 51.016 3 0.13312782609577106 0.0008387854386847844 0.004458696402063386 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 61373 6004 LITEDVQGK True NCI_RA007_Epitope_Rep2 1001.5393253710098 1001.53822993586 27.964 2 0.13312769488974957 0.0008387854386847844 0.004458709840365174 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 129319 15015 VQYEGNINV True PC9_epitope_Rep1 1034.50327421546 1034.5021699358601 62.575 2 0.13312616530196095 0.0008387854386847844 0.004458866505805334 ['SLFN5|p.E282Kfs*34|1|0.15|ENSG00000166750|chr17:35259530-35259530|C/-|frameshift_variant', 'nc|ENSG00000166750|Q08AF3-2|SLFN5', 'ENSG00000166750|ENST00000299977|SLFN5'] 84335 9893 PYTKVEESF True PC9_epitope_Rep6 1098.5233409536997 1098.5222499358601 48.554 2 0.13312538472287255 0.0008387854386847844 0.00445894645738986 ['ENSG00000182858|ENST00000330817|ALG12'] 8616 18781 ATYVFLHTV True PC9_epitope_Rep3 1049.5545815123298 1049.5534899358602 77.461 2 0.13312217815479777 0.0008387854386847844 0.004459274908131228 ['ENSG00000123353|ENST00000243045|ORMDL2'] 78324 13427 NYISGIQTI True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 58.333 2 0.13312120604155372 0.0008387854386847844 0.004459374487003521 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 52837 11283 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 48.725 2 0.13312111531754517 0.0008387854386847844 0.004459383780471441 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 21948 10378 ESEDPDYYQY True H1975_Epitope_Rep3 1307.48299226335 1307.4824749679299 44.975 1 0.13311449908122994 0.0008387854386847844 0.004460061577381685 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 11963 16735 DHNINLVSM True PC9_epitope_Rep1 1041.4913296327702 1041.49022993586 69.198 2 0.13310378023160319 0.0008387854386847844 0.00446115988008675 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 76781 16350 NRADGNFLL True PC9_epitope_Rep1 1018.51959298594 1018.51848993586 67.711 2 0.13310351727498573 0.0008387854386847844 0.004461186827185557 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 12230 8162 DIIPNPQER True H1975_Epitope_Rep3 1080.5563724174801 1080.55526993586 36.374 2 0.1331031033187967 0.0008387854386847844 0.004461229248646497 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 35266 19856 GRDLTDYLM True PC9_epitope_Rep1 1082.50664534374 1082.50554993586 81.192 2 0.13310280508740582 0.0008387854386847844 0.004461259811091797 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 35130 18519 GQWASVIRV True PC9_epitope_Rep5 1014.5610638750999 1014.55996993586 76.258 2 0.13310243705161254 0.0008387854386847844 0.004461297527304958 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 54460 10723 KYGNANVW True PC9_epitope_Rep3 950.46101548066 950.45990993586 46.2 2 0.13309913693384728 0.0008387854386847844 0.00446163573657793 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 71138 23746 LYLPSFFTY True PC9_epitope_Rep3 1149.57464825057 1149.57354993586 96.624 2 0.13309792141163168 0.0008387854386847844 0.004461760314531518 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 28286 12218 FRPLYTHEY True PC9_epitope_Rep5 1224.5927579261997 1224.59110490379 51.984 3 0.13309341503363742 0.0008387854386847844 0.004462222199750074 ['ENSG00000008952|ENST00000337002|SEC62'] 4362 9822 AILLPQPPK True NCI_RA007_Epitope_Rep5 975.61170246563 975.61060993586 44.426 2 0.13308938003914877 0.0008387854386847844 0.004462635810121024 ['nc|ENSG00000132256|Q9C035-4|TRIM5', 'ENST00000437681.1_1_1:28835797-28835884:+|nuORF', 'AluSq_dup1109|chr1:161212562-161212852:-|1.1902309979621175|0.0170353827791468|6.13|540.0|13|1|anti-sense', 'ENST00000483835.5_1_11:5685320-5686489:-|nuORF', 'ENST00000608290.1_1_22:46409584-46410459:+|nuORF', 'ENST00000567741.1_1_1:25644693-25663698:-|nuORF', 'ENST00000591166.1_1_17:42259005-42263988:-|nuORF', 'ENST00000585457.5_1_17:42259005-42264009:-|nuORF', 'nc|ENSG00000204370|O14521-4|SDHD', 'nc|ENSG00000137090|Q9Y5R6-3|DMRT1', 'ENST00000496007.5_1_1:1324344-1326370:-|nuORF', 'ENST00000452360.6_1_4:942397-950358:+|nuORF'] 75011 10814 NHSDLDAEL True PC9_epitope_Rep1 1012.44615326216 1012.44504993586 46.483 2 0.1330865510438955 0.0008387854386847844 0.004462925821118123 ['ENSG00000184292|ENST00000371225|TACSTD2'] 77574 12801 NTDPSIVMTY True H1975_Epitope_Rep1 1139.51687567427 1139.5157699358601 54.302 2 0.13308542132862808 0.0008387854386847844 0.004463041637694899 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 11874 14990 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52760993586 65.598 2 0.1330850527169655 0.0008387854386847844 0.004463079427806154 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 138491 13837 YHSEVPVSL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 58.508 2 0.13308418912533335 0.0008387854386847844 0.004463167964558435 ['ENSG00000115306|ENST00000356805|SPTBN1'] 84919 7099 QEDSFSAEA True H1975_Epitope_Rep3 982.3879696797 982.3874249679301 32.276 1 0.13307876533176774 0.0008387854386847844 0.00446372405989083 ['ENSG00000155096|ENST00000337198|AZIN1'] 7588 2606 ASFDKAKLK True NCI_RA007_Epitope_Rep5 1006.58113061334 1006.58002993586 14.732 2 0.1330785614531406 0.0008387854386847844 0.004463744964665411 ['ENSG00000034510|ENST00000233143|TMSB10'] 6791 19461 AQEDYLFSV True PC9_epitope_Rep6 1070.49204082542 1070.49094993586 87.519 2 0.1330726959571566 0.0008387854386847844 0.004464346426942366 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 27122 21049 FLIQHLPLV True PC9_epitope_Rep2 1078.65390163078 1078.6528099358602 86.419 2 0.13307050725472686 0.0008387854386847844 0.004464570882313116 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 40725 5536 HRTDSEIAL True PC9_epitope_Rep6 1040.5250722892 1040.5239699358601 29.31 2 0.133069529825476 0.0008387854386847844 0.004464671123036416 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 13224 10847 DLSLEEIQK True NCI_RA007_Epitope_Rep1 1073.5604547384098 1073.5593499358602 46.187 2 0.13306617785517955 0.0008387854386847844 0.004465014902811934 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2', 'ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 23093 15508 EVIKELAQI True PC9_epitope_Rep6 1041.6070110080097 1041.6059099358602 71.829 2 0.13306449156030375 0.0008387854386847844 0.004465187859942818 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 43696 14593 IHDNGEFYL True PC9_epitope_Rep6 1106.50327421546 1106.5021699358601 68.03 2 0.13306014171325606 0.0008387854386847844 0.0044656340384418135 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 8160 3399 ATEQPLTAK True NCI_RA007_Epitope_Rep4 957.5131106231698 957.51200993586 18.932 2 0.13305610426866477 0.0008387854386847844 0.004466048212120123 ['ENSG00000120725|ENST00000394817|SIL1'] 107215 14066 SVIQNLRTV True PC9_epitope_Rep3 1028.5978433066398 1028.59674993586 59.192 2 0.133054393857005 0.0008387854386847844 0.004466223682917307 ['ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1', 'PSMD1|p.V724Gfs*18|1|0.09|ENSG00000173692|chr2:231153616-231153620|ATGTC/-|frameshift_variant'] 125055 9247 VIDQQNGLY True H1975_Epitope_Rep1 1048.5189242795998 1048.5178299358602 40.48 2 0.1330543140087464 0.0008387854386847844 0.004466231874700663 ['ENSG00000132383|ENST00000254719|RPA1'] 9359 11066 AVSDGVIKV True PC9_epitope_Rep2 886.5123823471799 886.51128993586 47.883 2 0.13305066090420475 0.0008387854386847844 0.004466606669431948 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 85725 12153 QHAVEAISL True PC9_epitope_Rep2 966.5134449763399 966.51234993586 52.056 2 0.1330472449468848 0.0008387854386847844 0.004466957161822685 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 117001 12863 TVHDKFLAL True PC9_epitope_Rep2 1042.5811306133398 1042.58002993586 54.779 2 0.13304468081207832 0.0008387854386847844 0.004467220271265756 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 121939 19461 VFSPDGHLF True PC9_epitope_Rep3 1017.4919812557699 1017.49088993586 80.085 2 0.13304390533568544 0.0008387854386847844 0.004467299846988986 ['nc|ENSG00000101182|O14818-4|PSMA7', 'ENST00000484488.5_1_20:60714188-60718428:-|nuORF', 'ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8'] 22446 6813 ETERRMDFY True H1975_Epitope_Rep3 1245.54482175761 1245.54372993586 31.16 2 0.1330383481865506 0.0008387854386847844 0.004467870136288528 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 75408 11280 NIVEKLREV True PC9_epitope_Rep6 1098.6397081186199 1098.6386099358601 54.401 2 0.1330381994202169 0.0008387854386847844 0.0044678854040689385 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 24261 18626 EYTAKIALL True PC9_epitope_Rep5 1020.5855472874399 1020.58444993586 76.67 2 0.13303808124844266 0.0008387854386847844 0.004467897531988684 ['ENSG00000092820|ENST00000367075|EZR'] 42550 7019 IEESGEHIIA True H1975_Epitope_Rep3 1096.540053647 1096.53894993586 31.961 2 0.13303733052175087 0.0008387854386847844 0.004467974579513386 ['ENSG00000167658|ENST00000309311|EEF2'] 46670 9004 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.54912993586 39.538 2 0.13303663247546962 0.0008387854386847844 0.004468046221592254 ['ENSG00000170348|ENST00000303575|TMED10'] 98697 12437 SGFSGVIRL True H1975_Epitope_Rep2 934.52361573722 934.52250993586 52.927 2 0.13303425410160064 0.0008387854386847844 0.004468290328024272 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 26867 7720 FLDESRSTQY True H1975_Epitope_Rep1 1244.567331024 1244.5667749679299 34.658 1 0.13302943863166874 0.0008686300463269358 0.004468784608173024 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 112313 12197 TKWSDPITL True NCI_RA007_Epitope_Rep3 1059.5600608155898 1059.5589699358602 55.109 2 0.13302457539900242 0.0008686300463269358 0.004469283845628947 ['ENSG00000243566|ENST00000334348|UPK3B'] 125194 8341 VIIEGDLER True H1975_Epitope_Rep3 1042.56587447202 1042.56476993586 37.069 2 0.13302205918061225 0.0008686300463269358 0.0044695421708166455 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF'] 42 17237 AAAAVIPTV True PC9_epitope_Rep5 811.48035394291 811.47924993586 71.32 2 0.1330195514078047 0.0008686300463269358 0.004469799643600618 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 125004 19621 VIAEILRGV True PC9_epitope_Rep3 968.6018660579199 968.60076993586 80.709 2 0.1330176402913945 0.0008686300463269358 0.004469995867554768 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 105449 17077 SRVDDVYSVL True PC9_epitope_Rep4 1151.58225281215 1151.5811499358601 73.683 2 0.13301728453572187 0.0008686300463269358 0.004470032395720816 ['ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 27656 18283 FPFAPPAAA True PC9_epitope_Rep6 887.4541391950698 887.45359496793 82.969 1 0.13301355244966317 0.0008686300463269358 0.004470415615394546 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 107704 6712 SVSAVNLPK True NCI_RA007_Epitope_Rep4 913.5232813840499 913.52218993586 32.442 2 0.1330119174430106 0.0008686300463269358 0.0044705835120626095 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1'] 26131 16215 FGVVVVGVGR True PC9_epitope_Rep2 987.5865503469497 987.58544993586 67.618 2 0.13301133492717204 0.0008686300463269358 0.004470643331345457 ['ENST00000453612.1_1_7:43810757-43831091:+|nuORF', 'ENSG00000106605|ENST00000265523|BLVRA'] 11912 17268 DHLLSVSL True PC9_epitope_Rep6 882.4810822189 882.47998993586 79.021 2 0.13301090023776646 0.0008686300463269358 0.004470687970660715 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 52827 12739 KPANLLISA True PC9_epitope_Rep5 925.55966689277 925.55856993586 54.007 2 0.13301051004707978 0.0008686300463269358 0.004470728040668472 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 125006 18444 VIAEILRGV True PC9_epitope_Rep4 968.6018660579199 968.60076993586 79.015 2 0.13300735077342113 0.0008686300463269358 0.004471052490264215 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 6732 22208 AQAQEVFFL True PC9_epitope_Rep5 1051.53384606775 1051.53274993586 90.435 2 0.13300224074087497 0.0008686300463269358 0.004471577327141095 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 134353 11170 VYPEKLATKF True PC9_epitope_Rep2 1194.6648602372995 1194.66322490379 48.291 3 0.13300195835688003 0.0008686300463269358 0.004471606331768094 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 20686 19342 EQDQSVLVL True PC9_epitope_Rep4 1029.5342399905699 1029.5331499358601 82.509 2 0.13299647144575386 0.0008686300463269358 0.004472169948033347 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 45126 16245 IPLYLKGGVA True PC9_epitope_Rep5 1029.6222671493297 1029.62116993586 67.475 2 0.13297922630523862 0.0008686300463269358 0.004473941827488768 ['ENSG00000112695|ENST00000684430|COX7A2'] 26238 12725 FHEGDAYVV True PC9_epitope_Rep1 1035.4661604307498 1035.4650699358601 53.821 2 0.13297889912288346 0.0008686300463269358 0.004473975451053974 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 44318 16676 ILDIPNQLY True H1975_Epitope_Rep2 1087.59136094387 1087.59026993586 69.38 2 0.13297804840861208 0.0008686300463269358 0.004474062877616005 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF', 'ENST00000482545.5_1_1:113239451-113241292:+|nuORF', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 41523 11446 HYPLNTVTF True NCI_RA007_Epitope_Rep4 1090.54474510462 1090.54364993586 50.955 2 0.13297666816365744 0.0008686300463269358 0.004474204726794951 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 72260 13311 MHSDMIYNV True PC9_epitope_Rep4 1108.4681516600401 1108.4670499358601 59.096 2 0.1329730083420317 0.0008686300463269358 0.004474580871864659 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 109735 4605 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 22.817 2 0.1329729569423367 0.0008686300463269358 0.0044745861547873435 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 78536 13359 NYPQSVPRL True PC9_epitope_Rep5 1072.56654317836 1072.5654499358602 56.399 2 0.13296297462098636 0.0008686300463269358 0.004475612266453024 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 140339 11944 YRDPGAVDL True PC9_epitope_Rep1 1004.4927095317598 1004.49160993586 50.809 2 0.1329557263367926 0.0008686300463269358 0.004476357483983128 ['ENST00000577240.1_1_17:73264046-73266276:-|nuORF', 'nc|ENSG00000125457|A9UHW6-2|MIF4GD', 'nc|ENSG00000125457|A9UHW6-3|MIF4GD'] 114488 19248 TPYNYPVPV True PC9_epitope_Rep2 1048.5229470308798 1048.52184993586 79.41 2 0.13295255690005758 0.0008686300463269358 0.0044766833816034 ['ENSG00000170906|ENST00000485876|NDUFA3'] 39939 16619 HPIEPVLITA True PC9_epitope_Rep5 1088.62299542532 1088.62188993586 68.93 2 0.13295217815475732 0.0008686300463269358 0.004476722327688693 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 129259 22992 VQVEDIVFL True PC9_epitope_Rep5 1060.580461907 1060.57987496793 93.43 1 0.13294323683494963 0.0008686300463269358 0.004477641853744296 ['ENSG00000197780|ENST00000338366|TAF13'] 98185 6871 SETEATPVP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 31.348 1 0.13293979311063855 0.0008686300463269358 0.004477996056322453 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 108191 19303 SYGKINILL True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 79.624 2 0.1329311985432127 0.0008686300463269358 0.00447888016690645 ['ENSG00000112249|ENST00000369162|ASCC3'] 3912 9047 AHDDGRWSL True PC9_epitope_Rep2 1055.47845644995 1055.47734993586 40.147 2 0.13292858119965112 0.0008686300463269358 0.004479149443409179 ['ENSG00000075618|ENST00000382361|FSCN1'] 21530 10686 ERMPEQIRL True PC9_epitope_Rep4 1170.61792712822 1170.61682993586 48.853 2 0.1329206611968438 0.0008686300463269358 0.004479964363266942 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 73914 16738 NAYTGIVLL True H1975_Epitope_Rep3 962.54368247546 962.5431349679301 69.91 1 0.13291050527197815 0.0008686300463269358 0.004481009559825435 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 1662 7962 AEFVEVTK True PC9_epitope_Rep4 921.4807478657299 921.47964993586 38.069 2 0.1329077414890799 0.0008686300463269358 0.004481294036049862 ['CON__P02769'] 8512 5054 ATSPVVYTR True NCI_RA007_Epitope_Rep5 992.52909504048 992.52798993586 26.14 2 0.13290079582992123 0.0008686300463269358 0.0044820090315095314 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 74256 5393 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 25.78 2 0.13290063599582477 0.0008686300463269358 0.004482025486369923 ['ENSG00000167658|ENST00000309311|EEF2'] 107744 5012 SVSNVVITK True NCI_RA007_Epitope_Rep3 945.54949613189 945.54838993586 26.711 2 0.13289055793384763 0.0008686300463269358 0.0044830631394091195 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 88058 15487 QRQQLLVSL True PC9_epitope_Rep4 1083.64004247179 1083.6389499358602 67.499 2 0.1328893499129961 0.0008686300463269358 0.004483187535029066 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 16328 13585 EEHEWFIPA True H1975_Epitope_Rep3 1156.5189242796 1156.5178299358602 57.538 2 0.13288115166490655 0.0008686300463269358 0.004484031837360896 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 11020 9735 DAQSAPLRV True PC9_epitope_Rep5 955.50869394907 955.50758993586 42.416 2 0.13288033786178335 0.0008686300463269358 0.004484115656002436 ['CON__P02754'] 26423 11914 FIAPTGHSL True PC9_epitope_Rep2 941.4970666362101 941.49596993586 51.152 2 0.1328796813871995 0.0008686300463269358 0.0044841832715259685 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'SEPT6|p.K163N|1|0.23|ENSG00000125354|chrX:119652893-119652893|C/A|missense_variant', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 77073 17966 NRLEEPGNFVL True PC9_epitope_Rep4 1286.6619001151798 1286.66080993586 77.16 2 0.13286639929527166 0.0008686300463269358 0.004485551515521331 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 96046 11439 RYLQTLTTI True NCI_RA007_Epitope_Rep1 1107.62880908175 1107.6277099358601 48.459 2 0.13285996810869563 0.0008686300463269358 0.004486214166972392 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 49254 6444 KEQEPMPTV True H1975_Epitope_Rep3 1057.5113963710098 1057.51028993586 29.762 2 0.13285797703140997 0.0008686300463269358 0.00448641934157145 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2'] 38908 18562 HHFEWIQKL True PC9_epitope_Rep5 1236.64037682496 1236.63874490379 76.424 3 0.13284909847305976 0.0008686300463269358 0.004487334363285198 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 101855 11625 SLPKGVVEV True PC9_epitope_Rep4 926.54368247546 926.54258993586 52.473 2 0.13284388576353462 0.0008686300463269358 0.00448787166940815 ['ENSG00000149257|ENST00000358171|SERPINH1'] 1882 9641 AEIEHFVDP True H1975_Epitope_Rep3 1055.49237517859 1055.4912699358601 42.1 2 0.1328400439803453 0.0008686300463269358 0.004488267706312888 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 101294 17260 SLIGHLQTL True PC9_epitope_Rep4 980.5654805492001 980.56438993586 74.397 2 0.1328366651665649 0.0008686300463269358 0.004488616045698892 ['DUSP5|p.S336C|1|0.22|ENSG00000138166|chr10:110510278-110510278|C/G|missense_variant', 'ENSG00000138166|ENST00000369583|DUSP5'] 74868 10689 NHHLFTTTI True PC9_epitope_Rep4 1082.5508931142201 1082.5497899358602 48.867 2 0.13282376692433856 0.0008686300463269358 0.004489946037380816 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 6825 8390 AQFDADELR True NCI_RA007_Epitope_Rep2 1063.4934378077498 1063.4923499358601 37.275 2 0.13282109416758794 0.0008686300463269358 0.004490221685114136 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 40404 6728 HQVPAVSSV True PC9_epitope_Rep2 922.4872302285 922.48612993586 31.289 2 0.1328191444880825 0.0008686300463269358 0.00449042277070666 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 90793 3470 RESKVVVPP True NCI_RA007_Epitope_Rep5 1009.5920296502098 1009.59092993586 19.129 2 0.132809114539424 0.0008686300463269358 0.004491457377601289 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 54763 17968 KYNANFVTF True PC9_epitope_Rep1 1102.54474510462 1102.5441749679298 73.907 1 0.13280696314830426 0.0008686300463269358 0.0044916793280103205 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 97255 12136 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.46017496793 51.698 1 0.1328068083225506 0.0008686300463269358 0.004491695301180735 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 139718 6192 YNNVSNFGR True NCI_RA007_Epitope_Rep2 1069.49410651409 1069.49300993586 28.693 2 0.13280504935133444 0.0008686300463269358 0.004491876775873206 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 142680 15303 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 64.015 2 0.13280026376192525 0.0008686300463269358 0.004492370546173353 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 142656 19379 YYPEHFTLL True PC9_epitope_Rep4 1181.57571087973 1181.57460993586 82.651 2 0.1328001597167138 0.0008686300463269358 0.004492381282004653 ['ENSG00000100065|ENST00000251973|CARD10'] 46314 11808 ISQIVSSITAS True NCI_RA007_Epitope_Rep1 1104.60265390356 1104.60154993586 49.91 2 0.1327960760955652 0.0008686300463269358 0.004492802667541059 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 27829 14356 FQDENHLYL True PC9_epitope_Rep6 1177.54038800017 1177.53928993586 67.117 2 0.1327940008408541 0.0008686300463269358 0.004493016826321118 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 140201 10974 YQVAAAESHPL True PC9_epitope_Rep5 1184.5825871653199 1184.5814899358602 47.2 2 0.13279308120960706 0.0008686300463269358 0.004493111732158782 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 107206 14616 SVIPQIQKV True PC9_epitope_Rep5 1010.6124307416198 1010.61132993586 61.221 2 0.13277571573045963 0.0008686300463269358 0.004494904218786259 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 93902 19648 RRFMQTFVL True PC9_epitope_Rep5 1196.64883333368 1196.64718490379 80.632 3 0.13277414300653353 0.0008686300463269358 0.004495066592154503 ['G3BP1|p.A115S|1|0.19|ENSG00000145907|chr5:151791054-151791054|G/T|missense_variant', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 53802 9669 KTDLDLDGY True H1975_Epitope_Rep1 1038.48695544498 1038.4858499358602 42.117 2 0.13276826410215029 0.0008686300463269358 0.004495673601470478 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 6625 18371 APWKPTWPA True PC9_epitope_Rep3 1052.5443511817998 1052.54324993586 75.874 2 0.13276357617909387 0.0008686300463269358 0.004496157697377778 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23', 'PRSS23|p.A166Qfs*19|1|0.13|ENSG00000150687|chr11:86808138-86808138|G/-|frameshift_variant'] 104242 12702 SQIALNEKL True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 53.73 2 0.13276280171247398 0.0008686300463269358 0.004496237677213624 ['ENSG00000175390|ENST00000651655|EIF3F'] 9949 23337 AYMQEPLFVEF True PC9_epitope_Rep5 1372.6373251601196 1372.63622993586 94.747 2 0.1327622303429542 0.0008686300463269358 0.004496296683936186 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 34826 13911 GQIGMIQAL True NCI_RA007_Epitope_Rep3 929.5004377644899 929.49934993586 62.034 2 0.13276203017603574 0.0008686300463269358 0.004496317355842245 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A2|p.G861C|1|0.16|ENSG00000018625|chr1:160136587-160136587|G/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENSG00000132681|ENST00000368081|ATP1A4'] 77744 11312 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep3 1193.57505963717 1193.57396993586 48.618 2 0.13275413610984013 0.0008686300463269358 0.004497132677159735 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 75803 21037 NLNPEFISV True PC9_epitope_Rep1 1031.5287606873098 1031.52817496793 85.749 1 0.13275089934892492 0.0008686300463269358 0.004497467021060084 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 34814 18349 GQIDLLERL True PC9_epitope_Rep6 1055.59750895347 1055.59640993586 83.222 2 0.13274266299737517 0.0008686300463269358 0.004498317912377837 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.N627Kfs*7|1|0.66|ENSG00000134982|chr5:112835084-112835085|-/A|frameshift_variant', 'APC|p.R805Dfs*15|1|0.71|ENSG00000134982|chr5:112838007-112838007|C/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 8925 14117 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6971299358602 59.386 2 0.13274212287803666 0.0008686300463269358 0.0044983737172493545 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 104639 12712 SQSTVKVLI True PC9_epitope_Rep1 973.5807962601699 973.57968993586 53.769 2 0.13274146031144124 0.0008686300463269358 0.004498442174245308 ['ENSG00000143621|ENST00000361891|ILF2'] 73897 19821 NAVVELVTV True PC9_epitope_Rep4 942.5385970950199 942.53750993586 84.37 2 0.13274113124215906 0.0008686300463269358 0.004498476174370995 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 76807 4746 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 24.817 2 0.13273194337588273 0.0008686300463269358 0.004499425586238277 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 59776 9564 LGEHNIDVLE True NCI_RA007_Epitope_Rep3 1137.56660274801 1137.56550993586 44.705 2 0.1327271214509386 0.0008686300463269358 0.004499923930366091 ['CON__P00761'] 102508 6929 SLVNLGGSK True H1975_Epitope_Rep2 873.4919812557699 873.49088993586 31.573 2 0.13271603484363004 0.0008686300463269358 0.004501069933520308 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 1431 14727 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48601496793 61.809 1 0.132713644059992 0.0008686300463269358 0.004501317102355909 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 85252 9069 QEQFNSIAA True H1975_Epitope_Rep3 1006.4719740871798 1006.47147496793 39.869 1 0.13271291080281347 0.0008686300463269358 0.004501392912116622 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 17412 5741 EHDPVGQM[Oxidation]V True PC9_epitope_Rep1 1026.4440454676198 1026.44294993586 26.9 2 0.13270801066735197 0.0008686300463269358 0.004501899558091632 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 141380 8935 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43407496793 39.328 1 0.13270784705240576 0.0008686300463269358 0.004501916475911269 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 104405 17996 SQLDSPKALYL True PC9_epitope_Rep1 1233.66050313285 1233.6594099358601 74.014 2 0.13269219827069395 0.0008686300463269358 0.004503534853012974 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 27354 17558 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55750993586 72.845 2 0.13268712424967133 0.0008686300463269358 0.00450405972497896 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 44330 14681 ILDPHVVLL True H1975_Epitope_Rep2 1017.6222671493299 1017.6211699358599 61.632 2 0.13268562638749534 0.0008686300463269358 0.004504214679871159 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 97536 9098 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 39.984 1 0.13268422551401857 0.0008686300463269358 0.004504359605972052 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 115708 8212 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 39.436 2 0.13268197703742407 0.0008686300463269358 0.004504592229702255 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 49846 9808 KIDEHHFVAV True PC9_epitope_Rep1 1193.6193070272102 1193.61766490379 42.589 3 0.13268151427874547 0.0008686300463269358 0.004504640107432289 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 56757 8606 LDLPVRQA True H1975_Epitope_Rep2 910.52361573722 910.52250993586 38.058 2 0.13268088206978446 0.0008686300463269358 0.004504705517562259 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 26892 21758 FLDGNELTL True PC9_epitope_Rep1 1020.51277627 1020.51166993586 88.526 2 0.1326721247976281 0.0008686300463269358 0.004505611666098768 ['ENSG00000213719|ENST00000375784|CLIC1'] 17506 13580 EHFPQAYSV True PC9_epitope_Rep1 1076.49270953176 1076.4916099358602 57.091 2 0.13267211615204455 0.0008686300463269358 0.004505612560779272 ['ENSG00000076201|ENST00000265562|PTPN23'] 2528 2763 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 14.711 2 0.13266260948113434 0.0008686300463269358 0.004506596456157589 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 99338 7945 SHSSFQASL True PC9_epitope_Rep6 962.44575933934 962.44466993586 40.004 2 0.13265495067058422 0.0008686300463269358 0.0045073892608499646 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 4332 6049 AIITPPPAK True NCI_RA007_Epitope_Rep4 906.5538532363399 906.55274993586 29.885 2 0.1326511854046289 0.0008686300463269358 0.0045077790742184 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 140168 15799 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51748993586 66.03 2 0.13264928200161877 0.0008686300463269358 0.004507976143849238 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 137604 7935 YEETSGVSV True H1975_Epitope_Rep3 969.4291062156899 969.42855496793 35.491 1 0.13263583981362317 0.0008686300463269358 0.0045093681283218485 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 31612 10479 GEEWKGYVV True H1975_Epitope_Rep3 1065.5131106231697 1065.51200993586 45.37 2 0.1326356660007482 0.0008686300463269358 0.004509386130014123 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000497406.2_1_12:59414000-59414099:+|nuORF', 'ENST00000397390.3_1_9:19200870-19200993:-|nuORF'] 44167 18706 IITKDLFQV True PC9_epitope_Rep4 1075.62774645259 1075.62664993586 80.032 2 0.13263538961602234 0.0008686300463269358 0.004509414755155681 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 72169 6624 M[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep2 1137.49720323929 1137.4961099358602 30.377 2 0.13262628702995508 0.0008686300463269358 0.004510357609326296 ['ENSG00000171858|ENST00000343986|RPS21'] 4143 7540 AHTAEVNCL True PC9_epitope_Rep2 956.43856578392 956.43746993586 34.369 2 0.13262414326331853 0.0008686300463269358 0.004510579690912417 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 71841 14050 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 59.195 2 0.1326054779639571 0.0008686300463269358 0.004512513761615992 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 90668 5392 REQEITAVQA True H1975_Epitope_Rep1 1143.58840082175 1143.58730993586 25.797 2 0.13260447668791467 0.0008686300463269358 0.004512617535466077 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 68346 15320 LTELPPLDDY True H1975_Epitope_Rep3 1174.57577044938 1174.57517496793 64.337 1 0.132601068437635 0.0008686300463269358 0.004512970789613907 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 88577 6315 QTDKLKELY True H1975_Epitope_Rep3 1136.6077392839998 1136.60664993586 29.289 2 0.13259740299460337 0.0008686300463269358 0.004513350731394243 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 131020 4774 VTDRDIDRY True H1975_Epitope_Rep2 1151.55710069347 1151.55544490379 23.452 3 0.13259612356641168 0.0008686300463269358 0.004513483358048532 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 67957 6899 LTDDKLSQY True H1975_Epitope_Rep3 1081.52915461013 1081.52804993586 31.496 2 0.13259479461597132 0.0008686300463269358 0.00451362112229191 ['ENSG00000121879|ENST00000263967|PIK3CA'] 91930 8572 RKLVAEVSL True NCI_RA007_Epitope_Rep2 1013.6233297784898 1013.62222993586 37.988 2 0.13258029944932986 0.0008686300463269358 0.004515124017717285 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 26234 8876 FHDSAVTSV True PC9_epitope_Rep3 961.45051036661 961.44940993586 39.092 2 0.13257379724162152 0.0008686300463269358 0.004515798343321436 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 102894 15627 SPAPPLLHV True PC9_epitope_Rep1 929.53345214493 929.53234993586 64.928 2 0.13257242689900015 0.0008686300463269358 0.00451594047035544 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 128786 18318 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 75.475 2 0.13257145209694476 0.0008686300463269358 0.004516041576021983 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 32848 11524 GHNLQTVQL True PC9_epitope_Rep5 1008.53524305008 1008.53414993586 49.324 2 0.1325687028063639 0.0008686300463269358 0.004516326742202742 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 40662 10876 HRQEIQVVL True PC9_epitope_Rep2 1120.63529144452 1120.6341899358601 47.152 2 0.13256857403854763 0.0008686300463269358 0.004516340098893152 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 71321 22034 LYQFNPAFF True PC9_epitope_Rep4 1145.5545815123298 1145.5534899358602 92.975 2 0.13255973765877577 0.0008686300463269358 0.004517256762503788 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 121836 10507 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 48.391 2 0.13255544339942432 0.0008686300463269358 0.004517702304310647 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 27865 21014 FQDPVPLTV True PC9_epitope_Rep3 1014.5385970950199 1014.53750993586 86.108 2 0.13255231674955306 0.0008686300463269358 0.00451802673052335 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 31587 12471 GEEMPGLSV True H1975_Epitope_Rep2 917.4164333570099 917.4158849679301 53.058 1 0.13255215737332873 0.0008686300463269358 0.004518043268271727 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 107850 5960 SVVGNFQEK True NCI_RA007_Epitope_Rep5 1006.5083595959 1006.50726993586 29.608 2 0.13254700692592922 0.0008686300463269358 0.004518577738987189 ['ENSG00000180061|ENST00000326652|TMEM150B'] 30064 19188 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6171499358602 78.846 2 0.13253932271514554 0.0008686300463269358 0.0045193752585506244 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 49388 7635 KETFPGVTA True H1975_Epitope_Rep3 948.4916469025998 948.49054993586 34.35 2 0.13253903000896103 0.0008686300463269358 0.0045194056403297395 ['nc|ENSG00000153029|Q95460-2|MR1', 'ENSG00000153029|ENST00000367580|MR1'] 54667 11878 KYLSVQGQLF True NCI_RA007_Epitope_Rep3 1181.64445914589 1181.6433699358602 53.85 2 0.1325303486859757 0.0008686300463269358 0.0045203068199249075 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 58078 9226 LEIPPPKPP True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 40.482 2 0.13252942794219277 0.0008686300463269358 0.0045204024097021305 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 108266 21121 SYIEHIFEI True PC9_epitope_Rep2 1149.57062549929 1149.57007496793 86.701 1 0.13252547901174588 0.0008686300463269358 0.004520812402366444 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 9974 20475 AYPEYLITY True PC9_epitope_Rep4 1131.54882742555 1131.5477299358602 86.904 2 0.1325249969557892 0.0008686300463269358 0.004520862453722135 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 28188 18556 FREDMPSIL True PC9_epitope_Rep4 1106.5430308524599 1106.54192993586 79.45 2 0.1325239620084957 0.0008686300463269358 0.004520969913041325 ['ENSG00000125676|ENST00000245838|THOC2'] 19408 8908 ELLYYANK True NCI_RA007_Epitope_Rep1 1012.5229470308799 1012.52184993586 38.65 2 0.13252070520918288 0.0008686300463269358 0.004521308085281583 ['CON__P02769'] 111391 8931 THSFGNPSI True PC9_epitope_Rep2 958.45084471978 958.44974993586 39.71 2 0.13251524872738152 0.0008686300463269358 0.00452187471913317 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.Q39Afs*14|1|0.2|ENSG00000145012|chr3:188406232-188406236|ACACA/-|frameshift_variant'] 49878 8237 KIFSGVFVK True NCI_RA007_Epitope_Rep3 1023.6117024656298 1023.61060993586 39.535 2 0.13250843871533086 0.0008686300463269358 0.004522582009930021 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 27462 13275 FM[Oxidation]DPASALY True H1975_Epitope_Rep2 1029.44773386573 1029.4471749679299 56.191 1 0.13250617128667233 0.0008686300463269358 0.004522817530257481 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 90834 9252 RETETVFVP True NCI_RA007_Epitope_Rep5 1076.5502244078798 1076.54912993586 42.237 2 0.1324998548351098 0.0008686300463269358 0.004523473690854051 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 104708 16226 SQVDRLVAL True PC9_epitope_Rep5 999.5712942056298 999.57018993586 67.402 2 0.13249645047448166 0.0008686300463269358 0.004523827378864159 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 2252 5824 AENPKLISA True H1975_Epitope_Rep2 941.5181960036099 941.51708993586 27.393 2 0.1324706812534674 0.0008686300463269358 0.0045265054957881 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 34837 18489 GQISEVVVV True PC9_epitope_Rep2 928.5229470308799 928.52184993586 76.453 2 0.13245155856529056 0.0008686300463269358 0.004528493869137115 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 118335 12372 TYMKDLYQL True NCI_RA007_Epitope_Rep4 1173.5739966275698 1173.57288993586 54.585 2 0.13244870409697154 0.0008686300463269358 0.004528790750053433 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 21203 10131 ERDPATYNI True PC9_epitope_Rep1 1077.5090878718902 1077.50798993586 43.842 2 0.13244586487316534 0.0008686300463269358 0.004529086064490935 ['ENSG00000138246|ENST00000260818|DNAJC13'] 114008 6491 TPAPSAPAA True PC9_epitope_Rep1 781.39701824177 781.39646496793 29.772 1 0.13244517924783644 0.0008686300463269358 0.0045291573808622304 ['ENSG00000130706|ENST00000253003|ADRM1'] 95723 10363 RYGLVTNEI True NCI_RA007_Epitope_Rep2 1063.56620882519 1063.5651099358602 44.901 2 0.13244371941757507 0.0008686300463269358 0.004529309231036903 ['ENSG00000115267|ENST00000649979|IFIH1'] 17138 10594 EGPFYPTLR True H1975_Epitope_Rep3 1078.54474510462 1078.54364993586 45.819 2 0.13243987358303586 0.0008686300463269358 0.004529709295170962 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1', 'MCTS1|p.R74K|1|0.43|ENSG00000232119|chrX:120606135-120606135|G/A|missense_variant'] 37700 11608 GVYNGKTFNQV True PC9_epitope_Rep1 1225.60913626633 1225.60802993586 49.529 2 0.13243955153963974 0.0008686300463269358 0.0045297427974163185 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 2189 8562 AELWKNPTA True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 37.887 2 0.13243671591398698 0.0008686300463269358 0.004530037798723596 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C'] 27648 20135 FPFAPPAAA True PC9_epitope_Rep2 887.4541391950698 887.45359496793 82.86 1 0.13243037954768547 0.0008686300463269358 0.00453069706433099 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 2226 11729 AEMSTPLSV True H1975_Epitope_Rep2 933.44773348529 933.4471849679301 50.188 1 0.13242367966098906 0.0008686300463269358 0.004531394255221213 ['ENSG00000137275|ENST00000259808|RIPK1'] 109838 10817 TEELAYLK True PC9_epitope_Rep4 965.50696261357 965.50586993586 49.367 2 0.1324194516799404 0.0008686300463269358 0.0045318342737967416 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 31740 6682 GEGTPGLTA True H1975_Epitope_Rep2 801.38684748089 801.3862949679301 30.611 1 0.13241792905516434 0.0008686300463269358 0.0045319927482080635 ['nc|ENSG00000095066|Q96ED9-2|HOOK2', 'ENSG00000095066|ENST00000397668|HOOK2'] 106578 10859 STNNWVLIK True NCI_RA007_Epitope_Rep4 1073.58694426977 1073.58584993586 48.619 2 0.13241715142042143 0.0008686300463269358 0.004532073686348279 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 108437 15201 SYLPLAHMF True NCI_RA007_Epitope_Rep3 1077.53173789277 1077.53064993586 67.314 2 0.1324162059422304 0.0008686300463269358 0.004532172095968017 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 21277 20092 ERDTYMLLL True PC9_epitope_Rep4 1152.58489566444 1152.58378993586 85.416 2 0.13241488210063973 0.0008686300463269358 0.004532309890891357 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 118151 11275 TYIPVPAKI True NCI_RA007_Epitope_Rep4 1000.5957180483199 1000.59462993586 50.264 2 0.13240858441038642 0.0008686300463269358 0.0045329654562079914 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 7573 13212 ASETGFLTY True H1975_Epitope_Rep3 987.4549270407099 987.4543749679301 56.074 1 0.13240832601888183 0.0008686300463269358 0.004532992355765699 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 704 11751 AAVDATVNQVL True NCI_RA007_Epitope_Rep3 1099.58733819259 1099.58624993586 53.333 2 0.13240604405540538 0.0008686300463269358 0.004533229923846138 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 140574 8745 YRQKQVVIL True PC9_epitope_Rep2 1145.6920780446499 1145.69044490379 38.996 3 0.13240416002010083 0.0008686300463269358 0.004533426074120719 ['ENSG00000143179|ENST00000367879|UCK2'] 129041 17899 VQNDTLLQV True PC9_epitope_Rep4 1028.5502244078798 1028.5496749679298 76.887 1 0.13240374990343545 0.0008686300463269358 0.004533468773206993 ['ENSG00000184897|ENST00000333762|H1-10'] 31964 6054 GEPPKDYRIP True H1975_Epitope_Rep3 1170.6033226098998 1170.60166490379 28.301 3 0.13240259842812135 0.0008686300463269358 0.004533588660588347 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 111124 17929 THEPNFTII True PC9_epitope_Rep5 1070.53965972418 1070.53856993586 73.981 2 0.1324015065260602 0.0008686300463269358 0.004533702348308893 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 108673 20318 SYQKVIELF True PC9_epitope_Rep5 1125.6070110080097 1125.6059099358602 83.193 2 0.1323961499192323 0.0008686300463269358 0.004534260113427726 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 22465 16212 ETEYSFLDY True H1975_Epitope_Rep1 1165.4815357113698 1165.48097496793 67.708 1 0.13238835606686436 0.0008686300463269358 0.004535071781412797 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 4133 9770 AHSPSLQSL True PC9_epitope_Rep2 938.48214484806 938.48104993586 42.919 2 0.1323850429412635 0.0008686300463269358 0.004535416860589591 ['ENSG00000079313|ENST00000170168|REXO1'] 27435 24223 FLYPFPLAL True PC9_epitope_Rep2 1079.60555445603 1079.60497496793 98.712 1 0.13238335948136612 0.0008686300463269358 0.004535592211569011 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 124971 17999 VHTTTILYL True PC9_epitope_Rep2 1059.59644632431 1059.5953499358602 74.536 2 0.1323798552524787 0.0008686300463269358 0.004535957237227901 ['ENST00000476917.5_1_10:126100559-126100658:-|nuORF'] 53138 11237 KPYESYIGA True PC9_epitope_Rep5 1026.5022115862998 1026.50110993586 48.213 2 0.1323773132517205 0.0008686300463269358 0.0045362220484176 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 103418 8465 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 37.523 2 0.13237356598964545 0.0008686300463269358 0.004536612444677141 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 10052 12575 AYSRVQYQF True PC9_epitope_Rep2 1160.5614577979202 1160.56036993586 53.678 2 0.13236951551706638 0.0008686300463269358 0.004537034467187947 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 125328 17753 VIPGMFKEV True PC9_epitope_Rep5 1018.5521389841799 1018.55104993586 73.306 2 0.13236944587557822 0.0008686300463269358 0.0045370417235379296 ['ENSG00000122729|ENST00000309951|ACO1'] 28476 11679 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44417496793 49.912 1 0.13236243429161593 0.0008686300463269358 0.004537772359652097 ['ENSG00000170779|ENST00000336219|CDCA4'] 21576 2612 ERQPGAASL True PC9_epitope_Rep2 927.4773938207899 927.47628993586 14.706 2 0.1323616036591828 0.0008686300463269358 0.0045378589226799 ['ENSG00000180921|ENST00000388913|FAM83H'] 74348 7264 NEQGSYVVA True H1975_Epitope_Rep2 965.4454249861698 965.44432993586 32.877 2 0.13235312598539253 0.0008686300463269358 0.0045387425029772156 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 7528 17247 ASDSIVLFY True H1975_Epitope_Rep2 1013.5069626135701 1013.50637496793 71.632 1 0.13234467819466023 0.0008686300463269358 0.004539623137459791 ['ENSG00000087301|ENST00000281741|TXNDC16'] 104244 12632 SQIALNEKL True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 53.591 2 0.1323437093152341 0.0008686300463269358 0.0045397241484369175 ['ENSG00000175390|ENST00000651655|EIF3F'] 36804 17609 GVLDTLTKV True PC9_epitope_Rep6 944.55424715916 944.55314993586 80.373 2 0.13233896473840012 0.0008686300463269358 0.004540218828507276 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 135414 16923 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.55560993586 70.251 2 0.1323386962125286 0.0008686300463269358 0.004540246827197289 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 46679 9120 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.5496749679298 40.032 1 0.13233737880991883 0.0008686300463269358 0.004540384192767873 ['ENSG00000170348|ENST00000303575|TMED10'] 24216 5575 EYSKQMQRF True NCI_RA007_Epitope_Rep2 1215.57064258263 1215.56899490379 26.301 3 0.1323336940268007 0.0008686300463269358 0.00454076842686354 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 133694 9499 VYASDRATF True PC9_epitope_Rep1 1028.4927095317598 1028.4916099358602 41.394 2 0.1323257532524006 0.0008686300463269358 0.004541596567290897 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 139999 20739 YQDPVTLQL True PC9_epitope_Rep2 1075.55497543515 1075.55447496793 85.212 1 0.1323221906023238 0.0008686300463269358 0.004541968163139869 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 108665 20413 SYQKVIELF True PC9_epitope_Rep1 1125.6070110080097 1125.60647496793 83.331 1 0.13232065420302405 0.0008686300463269358 0.004542128423773786 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 78669 20138 NYVQAVEEF True PC9_epitope_Rep2 1097.5029398622898 1097.50184993586 82.872 2 0.13232000850319772 0.0008686300463269358 0.004542195777891832 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 116906 22130 TVFLYFESV True PC9_epitope_Rep4 1103.55391280599 1103.55280993586 93.34 2 0.13231799145566703 0.0008686300463269358 0.004542406186114607 ['ENSG00000155957|ENST00000358230|TMBIM4'] 40762 15818 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.55843490379 68.769 3 0.13231419149087795 0.0008686300463269358 0.004542802605376041 ['ENSG00000169813|ENST00000682386|HNRNPF'] 30102 14132 FYLEGGFSKF True NCI_RA007_Epitope_Rep3 1193.57571087973 1193.57460993586 62.878 2 0.1323072919214728 0.0008686300463269358 0.0045435224682375775 ['ENSG00000139318|ENST00000279488|DUSP6'] 88641 11036 QTELGNQLEY True H1975_Epitope_Rep3 1193.5564319871298 1193.55532993586 47.539 2 0.13230474168600445 0.0008686300463269358 0.004543788574148872 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 96051 11616 RYLQTLTTI True NCI_RA007_Epitope_Rep4 1107.62880908175 1107.6277099358601 51.634 2 0.1322943283281643 0.0008686300463269358 0.0045448753219482375 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 126846 15443 VLQALEGLK True PC9_epitope_Rep3 969.5858816406098 969.58478993586 64.555 2 0.13229273707515524 0.0008686300463269358 0.004545041409175207 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 142910 21284 YYVGGEIVTI True PC9_epitope_Rep5 1112.57537652656 1112.57426993586 86.922 2 0.13228179873114534 0.0008686300463269358 0.004546183262119009 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 99366 9977 [Acetylation]-SHTILLVQPTK True NCI_RA007_Epitope_Rep5 1277.7343370957499 1277.7332299358602 45.018 2 0.13227895771186454 0.0008686300463269358 0.0045464798821821875 ['ENSG00000100632|ENST00000557016|ERH'] 110604 11686 TFTFSHATF True NCI_RA007_Epitope_Rep3 1057.4868958753298 1057.48578993586 53.083 2 0.13227686474857706 0.0008686300463269358 0.004546698412757815 ['ENSG00000204713|ENST00000377199|TRIM27'] 131055 14301 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56567496793 60.196 1 0.13227646924020361 0.0008686300463269358 0.004546739709758982 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 78250 16851 NYGRVFSEW True PC9_epitope_Rep6 1156.53015766964 1156.5290699358602 77.333 2 0.132276428266546 0.0008686300463269358 0.004546743988043995 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 16388 5653 EEISNLKAA True NCI_RA007_Epitope_Rep5 973.5080252427299 973.50692993586 28.432 2 0.13226634582910002 0.0008686300463269358 0.004547796871463678 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 104411 17514 SQLEDAIRL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 72.627 2 0.13226629677740034 0.0008686300463269358 0.004547801994396016 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 103355 20754 SPNSYFMDV True PC9_epitope_Rep1 1058.43789707758 1058.43737496793 84.657 1 0.13226582101561618 0.0008686300463269358 0.004547851682988359 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 26352 8926 FHSGDDSQVL True PC9_epitope_Rep2 1103.48835242731 1103.48724993586 39.691 2 0.13226373328475113 0.0008686300463269358 0.004548069732066143 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 99347 17818 SHSVFSVTI True PC9_epitope_Rep2 975.50254593947 975.50144993586 73.831 2 0.13226198195309719 0.0008686300463269358 0.004548252654517845 ['ENSG00000138160|ENST00000260731|KIF11'] 1921 5105 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5971499358602 24.748 2 0.13226028452253988 0.0008686300463269358 0.004548429954049148 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 46695 9618 ITDVDNGYY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 41.921 1 0.13226012746924695 0.0008686300463269358 0.004548446358879184 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 132185 11202 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.49037496793 49.974 1 0.1322590427017022 0.0008686300463269358 0.004548559668680151 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 141065 10354 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 44.835 2 0.13225449549631707 0.0008686300463269358 0.004549034679008449 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 89075 10059 QVNDAFTHV True PC9_epitope_Rep4 1029.4879585044898 1029.48686993586 46.36 2 0.1322542351677857 0.0008686300463269358 0.004549061874936616 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 44156 20516 IITDLLRSV True PC9_epitope_Rep2 1028.62299542532 1028.62188993586 84.345 2 0.13225243290759678 0.0008686300463269358 0.004549250157345796 ['ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1'] 134783 22196 VYTVVDEMF True PC9_epitope_Rep1 1101.5052483614097 1101.5041499358601 90.197 2 0.13224717230546518 0.0008686300463269358 0.004549799777230619 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 105837 5482 SSLNLRET True NCI_RA007_Epitope_Rep4 918.47705946762 918.47596993586 27.671 2 0.1322382213119008 0.0008686300463269358 0.004550735114183699 ['ENSG00000026025|ENST00000544301|VIM'] 133404 19492 VVVPTLDTV True PC9_epitope_Rep4 941.5433481222899 941.54224993586 83.092 2 0.13223586892478076 0.0008686300463269358 0.004550980959087127 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 103956 15671 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51234993586 72.487 2 0.13223529445220156 0.0008686300463269358 0.004551040998454733 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 103891 16019 SQADVIPAV True PC9_epitope_Rep4 898.4759968384599 898.47488993586 69.55 2 0.1322331549049819 0.0008686300463269358 0.004551264614016632 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 5067 20174 ALLDRIVSV True PC9_epitope_Rep5 984.59678067748 984.59568993586 82.647 2 0.13223283495199276 0.0008686300463269358 0.0045512980549515854 ['ENSG00000155561|ENST00000285968|NUP205'] 117904 9038 TWNPGRPEPGS True PC9_epitope_Rep5 1196.55743504664 1196.55632993586 39.71 2 0.13222944329582761 0.0008686300463269358 0.0045516525599023265 ['CON__P02672'] 48903 4200 KEDKPPLAP True H1975_Epitope_Rep3 993.5494961318898 993.54838993586 21.273 2 0.13222816869729842 0.0008686300463269358 0.0045517857913782295 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 75017 9690 NHSDYNM[Oxidation]VL True PC9_epitope_Rep5 1107.46550918819 1107.4644099358602 42.24 2 0.13222649187763116 0.0008686300463269358 0.00455196107215718 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 21928 11664 ESDVGVVVY True H1975_Epitope_Rep1 965.47057710485 965.47002496793 49.855 1 0.13222553485690822 0.0008686300463269358 0.0045520611141249764 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 35160 17007 GQWVGTVLL True NCI_RA007_Epitope_Rep4 971.5440168286299 971.54346496793 73.698 1 0.13222488571532454 0.0008686300463269358 0.004552128973242951 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF'] 8321 4192 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 23.124 2 0.1322217114896959 0.0008686300463269358 0.004552460810671776 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 12754 9562 DLEIATYR True NCI_RA007_Epitope_Rep2 979.4974605590301 979.49691496793 41.808 1 0.13222090624427751 0.0008686300463269358 0.004552544995804644 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 83292 9521 PTDENLLKY True H1975_Epitope_Rep2 1091.54989005471 1091.5487899358602 41.594 2 0.13221420259990782 0.0008686300463269358 0.004553245894127268 ['ENSG00000137547|ENST00000260102|MRPL15'] 72233 21116 MHFLENISL True PC9_epitope_Rep1 1102.5481162329 1102.5470099358602 86.052 2 0.132209874977599 0.0008686300463269358 0.004553698424397345 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 90676 5567 REQEITAVQA True H1975_Epitope_Rep3 1143.58840082175 1143.58787496793 26.455 1 0.13220246272004127 0.0008686300463269358 0.004554473611430099 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 53008 11669 KPIEELQNV True PC9_epitope_Rep1 1068.58152453616 1068.5804299358601 49.762 2 0.1321945299270801 0.0008686300463269358 0.004555303381094854 ['ENSG00000166920|ENST00000396650|C15orf48'] 121248 13135 VETFAFQA True H1975_Epitope_Rep3 911.4388830537499 911.43833496793 55.772 1 0.1321907889977731 0.0008686300463269358 0.00455569473378384 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 96331 11169 RYSSMAASF True PC9_epitope_Rep2 1018.4542158480599 1018.45310993586 48.286 2 0.13218650677098764 0.0008686300463269358 0.004556142754324527 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 3910 8864 AHDDGRWSL True PC9_epitope_Rep2 1055.47845644995 1055.47734993586 39.447 2 0.13218648245935216 0.0008686300463269358 0.0045561452980111584 ['ENSG00000075618|ENST00000382361|FSCN1'] 95114 14868 RVDPNGFFLY True H1975_Epitope_Rep2 1226.60840799034 1226.60730993586 62.342 2 0.13218456951894683 0.0008686300463269358 0.004556345450224218 ['ENSG00000149782|ENST00000279230|PLCB3'] 75226 14661 NIDPITMAY True H1975_Epitope_Rep1 1036.48993265044 1036.48937496793 61.608 1 0.13217986626464845 0.0008686300463269358 0.004556837591671056 ['ENSG00000116285|ENST00000377482|ERRFI1'] 85937 17994 QHIDFVTAI True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 77.271 2 0.1321750773629627 0.0008686300463269358 0.004557338748974867 ['IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 45347 18874 IQDEEFYTL True PC9_epitope_Rep6 1156.5288202569598 1156.5277299358602 85.247 2 0.13216678209557614 0.0008686300463269358 0.004558206975105499 ['ENSG00000178502|ENST00000319121|KLHL11'] 12060 17766 DHTAPLLL True PC9_epitope_Rep5 878.48616759934 878.48506993586 73.355 2 0.132160132152278 0.0008686300463269358 0.004558903110751838 ['ENSG00000188352|ENST00000338382|FOCAD'] 43666 19101 IHDGFGFML True PC9_epitope_Rep6 1035.48478770035 1035.4836899358602 86.122 2 0.13216001615367362 0.0008686300463269358 0.0045589152547573075 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 53183 20257 KQDLVELYL True PC9_epitope_Rep2 1119.6175756917098 1119.61646993586 83.339 2 0.1321528705492439 0.0008686300463269358 0.004559663396449247 ['ENSG00000160445|ENST00000291900|ZER1'] 64092 8869 LPDGYEFK True H1975_Epitope_Rep3 967.4650978015899 967.46400993586 39.116 2 0.1321513903744551 0.0008686300463269358 0.004559818385240529 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 90231 4895 REEDPFRSTA True H1975_Epitope_Rep2 1206.5629143499 1206.56125490379 23.913 3 0.13214470655454322 0.0008686300463269358 0.004560518311295659 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 47830 20212 IYGYVAEQF True PC9_epitope_Rep2 1088.5178616504397 1088.51727496793 83.163 1 0.13214419982234943 0.0008686300463269358 0.004560571380339627 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 134131 13513 VYLDKFIRL True NCI_RA007_Epitope_Rep4 1165.68593003505 1165.68427490379 59.187 3 0.13214168907667295 0.0008686300463269358 0.004560834334667816 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 84893 10714 QEASEAYLV True H1975_Epitope_Rep2 1008.4763907612797 1008.47587496793 46.236 1 0.13214158980997556 0.0008686300463269358 0.004560844731331689 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 141882 15420 YVDPVNKVL True PC9_epitope_Rep1 1045.58079626017 1045.5796899358602 64.132 2 0.13213906857821361 0.0008686300463269358 0.004561108799517197 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 85046 13025 QEIEHVFLV True H1975_Epitope_Rep3 1112.5866099165999 1112.58550993586 55.337 2 0.1321280844360788 0.0008686300463269358 0.004562259429918364 ['nc|ENSG00000165752|Q86UX6-2|STK32C', 'ENSG00000165752|ENST00000298630|STK32C'] 116913 9034 TVFSHAQTV True PC9_epitope_Rep1 988.4977949121999 988.49668993586 39.599 2 0.13212253399752963 0.0008686300463269358 0.004562840968156168 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 87781 13715 QRDFNSELL True PC9_epitope_Rep4 1120.5512870370399 1120.55018993586 60.643 2 0.1321134778243161 0.0008686300463269358 0.004563789970965808 ['ENSG00000042429|ENST00000251871|MED17', 'MED17|p.C601*|1|0.39|ENSG00000042429|chr11:93811909-93811910|TG/-|frameshift_variant', 'MED17|p.H347Ifs*25|1|0.19|ENSG00000042429|chr11:93796435-93796435|C/-|frameshift_variant'] 75233 14690 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.4888299358602 61.877 2 0.1321111474568052 0.0008686300463269358 0.004564034203302726 ['ENSG00000116285|ENST00000377482|ERRFI1'] 72047 18244 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.5514299358601 76.461 2 0.13210666542603505 0.0008686300463269358 0.004564503975238557 ['ENSG00000198712|ENST00000361739|MT-CO2'] 140941 15802 YSESSQLLYL True H1975_Epitope_Rep2 1201.58666948625 1201.5855699358601 65.969 2 0.13210645941260724 0.0008686300463269358 0.004564525569124694 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 22789 10358 ETYNGHLVSC True PC9_epitope_Rep5 1121.48115887189 1121.48006993586 44.826 2 0.1321018522818085 0.0008686300463269358 0.004565008505012884 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 3965 6850 AHDQNSNLL True PC9_epitope_Rep5 1010.47812209678 1010.47702993586 31.319 2 0.13209963163026994 0.0008686300463269358 0.004565241299619613 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'TGM2|p.E314K|1|0.17|ENSG00000198959|chr20:38142119-38142119|C/T|missense_variant'] 75550 18225 NLAEKLIGV True PC9_epitope_Rep4 955.5702315764698 955.56912993586 78.173 2 0.13209585678184038 0.0008686300463269358 0.00456563705013445 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 43684 17525 IHDGMNLEL True PC9_epitope_Rep3 1040.49608066004 1040.49498993586 72.593 2 0.13207640312125873 0.0008686300463269358 0.004567677084511281 ['ENSG00000198258|ENST00000586895|UBL5'] 95954 6157 RYLENGKETL True PC9_epitope_Rep4 1221.6353510141698 1221.6337049037902 30.709 3 0.1320743853542874 0.0008686300463269358 0.004567888731794042 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 85853 19278 QHFDPVIQL True PC9_epitope_Rep2 1095.5712942056298 1095.57018993586 79.526 2 0.13207309721483448 0.0008686300463269358 0.004568023852162206 ['ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 104179 20835 SQFPGAITL True PC9_epitope_Rep2 932.4967322830399 932.49562993586 85.588 2 0.13207299327473387 0.0008686300463269358 0.004568034755209933 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 8961 18520 AVGELLQEV True PC9_epitope_Rep6 956.51786165044 956.51676993586 83.879 2 0.13206543854227845 0.0008686300463269358 0.004568827295801254 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 111356 19100 THQPVFIQL True PC9_epitope_Rep5 1081.59202965021 1081.59092993586 78.498 2 0.13206022034943612 0.0008686300463269358 0.004569374797326053 ['ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant'] 1815 7288 AEIAESVQA True H1975_Epitope_Rep1 916.45017601344 916.44906993586 33.046 2 0.1320590160686235 0.0008686300463269358 0.004569501161668912 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 37502 21368 GVVDIFQTV True PC9_epitope_Rep4 976.52294703088 976.52239496793 90.359 1 0.1320561901095763 0.0008686300463269358 0.004569797701099915 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 71736 11050 MEENFAVEA True H1975_Epitope_Rep1 1038.4328116971399 1038.43227496793 47.466 1 0.1320554504565624 0.0008686300463269358 0.004569875319045415 ['ENSG00000026025|ENST00000544301|VIM'] 114410 10528 TPTLVEVSR True PC9_epitope_Rep5 1000.55530978832 1000.55420993586 45.484 2 0.1320462732372507 0.0008686300463269358 0.004570838469128882 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 43653 12880 IHDFQPHVI True PC9_epitope_Rep5 1104.5716285588 1104.5705299358601 54.553 2 0.1320459992957103 0.0008686300463269358 0.004570867222396301 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 30311 8622 GAAKDLPGV True PC9_epitope_Rep1 826.4548674710599 826.45376993586 38.002 2 0.1320456060253238 0.0008686300463269358 0.0045709085008893745 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 117670 8304 TVTSEVPFSK True NCI_RA007_Epitope_Rep2 1093.5655401188499 1093.56444993586 36.94 2 0.13204370291129922 0.0008686300463269358 0.0045711082609615865 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 132209 16995 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 70.619 2 0.13203895536644597 0.0008686300463269358 0.004571606623790595 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 17878 16843 EHVPVVIGL True PC9_epitope_Rep6 961.5596668927699 961.55856993586 77.3 2 0.13203717822392208 0.0008686300463269358 0.004571793189100818 ['ENSG00000170677|ENST00000397942|SOCS6'] 52707 8799 KMDDLNLHY True H1975_Epitope_Rep3 1147.53319444475 1147.53154490379 38.851 3 0.13203068330914797 0.0008686300463269358 0.004572475092336282 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 128409 7284 VPRPPDTVST True PC9_epitope_Rep4 1067.56112344475 1067.56002993586 35.333 2 0.132026434909047 0.0008686300463269358 0.004572921187494306 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 1078 7964 AEAIKAWTA True H1975_Epitope_Rep3 959.5076313199099 959.50652993586 35.605 2 0.13202246532311881 0.0008686300463269358 0.004573338045069973 ['ENST00000565493.1_1_20:34638316-34638640:-|nuORF'] 97317 5165 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 24.944 2 0.13202004684311158 0.0008686300463269358 0.004573592034936809 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 62592 18296 LLLAAARLAAA True PC9_epitope_Rep2 1052.67061432408 1052.66950993586 75.699 2 0.13201936858517427 0.0008686300463269358 0.004573663268389358 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 25378 9865 FEAPATINSA True H1975_Epitope_Rep3 1019.49237517859 1019.49126993586 42.975 2 0.13201458935896535 0.0008686300463269358 0.004574165233486193 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 1272 4886 AEDLNTRVA True H1975_Epitope_Rep1 987.49852318819 987.4974299358599 23.871 2 0.1320136481215595 0.0008686300463269358 0.004574264098635779 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 6340 6100 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 28.278 2 0.13200871326426208 0.0008686300463269358 0.004574782477790914 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 21699 18351 ERSNDYFVL True PC9_epitope_Rep2 1141.54038800017 1141.53928993586 75.918 2 0.13200743097295112 0.0008686300463269358 0.004574917184798135 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 124762 17567 VHDEGVWAL True PC9_epitope_Rep2 1024.4977949121999 1024.49668993586 72.847 2 0.13200610929356393 0.0008686300463269358 0.004575056033685332 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 48120 20384 IYPATIASI True PC9_epitope_Rep5 947.53278343859 947.53168993586 83.442 2 0.13200123876033984 0.0008686300463269358 0.0045755677428929616 ['nc|ENSG00000205571|Q16637-4|SMN1', 'nc|ENSG00000205571|Q16637-2|SMN1', 'nc|ENSG00000205571|Q16637-3|SMN1', 'ENSG00000205571|ENST00000380743|SMN2', 'ENSG00000172062|ENST00000380707|SMN1'] 98910 14274 SHADLAGVPL True PC9_epitope_Rep4 978.5134449763399 978.51234993586 62.807 2 0.1319809239176918 0.0008686300463269358 0.004577702674527751 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 77324 13484 NSDVSLLNY True H1975_Epitope_Rep1 1023.48728979815 1023.4861899358599 56.985 2 0.13197380833272768 0.0008686300463269358 0.00457845069921735 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 69634 15214 LVDPYMHEV True PC9_epitope_Rep5 1101.51648175145 1101.5153899358602 63.529 2 0.1319729935695836 0.0008686300463269358 0.0045785363587449845 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.S811Tfs*2|1|0.35|ENSG00000064313|chr8:119762511-119762541|TTATCCAAAGTTCTAACTTCATTATTCACAC/-|frameshift_variant'] 129335 12927 VQYNEPLKV True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 54.735 2 0.1319636111327975 0.0008686300463269358 0.004579522888218945 ['ENSG00000148843|ENST00000369797|PDCD11'] 33974 9847 GLSQSALPYR True PC9_epitope_Rep6 1090.5771078620598 1090.5760099358602 48.353 2 0.1319620928893869 0.0008686300463269358 0.0045796825457454044 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 38108 10203 HAYIISSL True NCI_RA007_Epitope_Rep3 902.4861675993401 902.48506993586 47.216 2 0.13195843535403926 0.0008686300463269358 0.004580067192401689 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 89582 6398 QYNPHVHQL True PC9_epitope_Rep5 1134.55704112382 1134.55540490379 29.586 3 0.13194606695466857 0.0008686300463269358 0.004581368157644897 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 21259 20888 ERDRLILFL True PC9_epitope_Rep3 1173.6869926642098 1173.6853349037901 85.62 3 0.13194435747004252 0.0008686300463269358 0.004581547997763672 ['ENSG00000138246|ENST00000260818|DNAJC13'] 328 18273 AAIEIFEKV True PC9_epitope_Rep4 1018.5698972232999 1018.56880993586 78.358 2 0.13194155710268876 0.0008686300463269358 0.004581842615271778 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 2298 11892 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.51128993586 50.892 2 0.13193465395773268 0.0008686300463269358 0.004582568952373407 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 121702 11815 VFLENVIR True NCI_RA007_Epitope_Rep5 988.5705659296399 988.56946993586 52.103 2 0.1319341715244137 0.0008686300463269358 0.004582619717424446 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 130149 9666 VSDTVVEPY True H1975_Epitope_Rep1 1007.4811417885498 1007.48004993586 42.106 2 0.131907224789303 0.0008686300463269358 0.0045854561240785885 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 141257 5260 YTDHQNSSSYY True H1975_Epitope_Rep1 1363.5316737912701 1363.53056993586 25.295 2 0.13190317355643696 0.0008686300463269358 0.004585882705447392 ['ENSG00000125398|ENST00000245479|SOX9'] 137139 10394 YAVEGRDL True PC9_epitope_Rep1 921.4555957470499 921.45448993586 44.865 2 0.13190145480185486 0.0008686300463269358 0.004586063696414855 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 9069 15068 AVIDVGINRV True PC9_epitope_Rep4 1054.61349337078 1054.6123899358602 65.891 2 0.1318979354661371 0.0008686300463269358 0.004586434316944335 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 59779 10233 LGEHNIDVLEG True H1975_Epitope_Rep2 1194.5880664685799 1194.58696993586 44.366 2 0.1318970820302061 0.0008686300463269358 0.004586524196556135 ['CON__P00761'] 26990 20121 FLEKLLPPV True PC9_epitope_Rep4 1054.6426682407398 1054.6415699358602 85.53 2 0.13189591976162787 0.0008686300463269358 0.0045866466036726455 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 97551 5262 SEESARLVAA True H1975_Epitope_Rep2 1031.5247379360299 1031.52364993586 25.308 2 0.13188391449913062 0.0008686300463269358 0.004587911155236932 ['ENSG00000008869|ENST00000233099|HEATR5B'] 7648 20073 ASIDILHSI True PC9_epitope_Rep5 967.5338460677501 967.53274993586 82.265 2 0.13188390010264983 0.0008686300463269358 0.004587912671869203 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 1963 8770 AEIPEEHIP True H1975_Epitope_Rep2 1033.50802524273 1033.5069299358602 38.698 2 0.13188310765499095 0.0008686300463269358 0.004587996154956732 ['ENSG00000198218|ENST00000395443|QRICH1'] 140314 14283 YRDGLVEQL True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 60.204 2 0.1318818554360795 0.0008686300463269358 0.004588128077259179 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF'] 75728 24439 NLLDLLTEV True PC9_epitope_Rep2 1028.57537652656 1028.57426993586 99.579 2 0.13187938017683015 0.0008686300463269358 0.004588388858876457 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 112099 19280 TIVNELVRV True PC9_epitope_Rep1 1041.61824439805 1041.6171499358602 78.963 2 0.13187908392984132 0.0008686300463269358 0.004588420071038084 ['ENSG00000171298|ENST00000302262|GAA'] 23094 15645 EVINTVAQV True PC9_epitope_Rep5 971.52876068731 971.52766993586 65.19 2 0.13187763740390634 0.0008686300463269358 0.004588572477959874 ['ENSG00000143753|ENST00000323699|DEGS1'] 63565 14626 LMDHTIPEV True PC9_epitope_Rep4 1053.51648175145 1053.5153899358602 64.188 2 0.13187693826929034 0.0008686300463269358 0.004588646141030315 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 31309 18809 GDLENAFLNL True H1975_Epitope_Rep1 1104.54513902744 1104.5440499358601 78.429 2 0.13187265376950813 0.0008686300463269358 0.004589097595157832 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 31794 6159 GEIESKFNQA True H1975_Epitope_Rep3 1121.53530261973 1121.53477496793 28.703 1 0.13186496029520378 0.0008686300463269358 0.004589908359937659 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 117963 12373 TYAPAIHQI True PC9_epitope_Rep1 1012.5341804209202 1012.53308993586 52.452 2 0.1318642218435781 0.0008686300463269358 0.00458998618793476 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 97993 4191 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 21.239 2 0.1318629933383685 0.0008686300463269358 0.004590115667273214 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 6428 21234 APRTVLLLLSA True PC9_epitope_Rep1 1152.7230438197598 1152.72194993586 86.5 2 0.13185183891291716 0.0008686300463269358 0.004591291462055294 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 95920 7651 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.61488490379 37.219 3 0.13185146354268779 0.0008686300463269358 0.004591331035222305 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 129 19726 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.5056249679301 82.605 1 0.13185033076811994 0.0008686300463269358 0.004591450459296579 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 139267 21181 YLIPDIDLKL True PC9_epitope_Rep4 1201.69582601241 1201.69472993586 89.636 2 0.13184285843480104 0.0008686300463269358 0.00459223831542468 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 116905 22845 TVFLYFESV True PC9_epitope_Rep2 1103.55391280599 1103.55280993586 93.364 2 0.13183316567939177 0.0008686300463269358 0.004593260483439736 ['ENSG00000155957|ENST00000358230|TMBIM4'] 36799 19853 GVLDTLTKV True PC9_epitope_Rep1 944.55424715916 944.55314993586 81.181 2 0.1318316429696832 0.0008686300463269358 0.004593421084076837 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 140237 14762 YQYPVIIHL True H1975_Epitope_Rep1 1144.6280808057597 1144.6269899358601 62.005 2 0.13182104783393747 0.0008686300463269358 0.004594538709369881 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 21427 17350 ERIQDYDVSL True PC9_epitope_Rep3 1236.5986311522797 1236.5975299358602 71.908 2 0.1318199821565912 0.0008686300463269358 0.004594651136915887 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 96168 12981 RYPDRITLI True PC9_epitope_Rep6 1145.65569253593 1145.65458993586 61.505 2 0.13181855021635894 0.0008686300463269358 0.004594802208979706 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 6398 5251 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 27.982 2 0.13181631282413878 0.0008686300463269358 0.0045950382673615574 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 140675 15761 YRVFTTQEL True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 65.891 2 0.1318142198745154 0.0008686300463269358 0.004595259096997616 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 111358 14765 THQTIVVQL True PC9_epitope_Rep1 1037.58694426977 1037.58584993586 61.612 2 0.13180962306373778 0.0008686300463269358 0.004595744148754738 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 142919 19325 YYWQTSAKW True PC9_epitope_Rep1 1231.5662088251897 1231.5651099358602 79.139 2 0.1318090401732612 0.0008686300463269358 0.004595805658491428 ['nc|ENSG00000142687|Q8IZA0-2|KIAA0319L', 'ENSG00000142687|ENST00000325722|KIAA0319L', 'KIAA0319L|p.G18V|1|0.16|ENSG00000142687|chr1:35554439-35554439|C/A|missense_variant', 'KIAA0319L|p.C37Lfs*15|1|0.25|ENSG00000142687|chr1:35554382-35554383|-/A|frameshift_variant', 'ENST00000476329.1_1_1:35998986-36020116:-|nuORF'] 108050 21284 SYADQM[Oxidation]FLL True PC9_epitope_Rep2 1102.50049771458 1102.49940993586 87.331 2 0.13179963151535024 0.0008686300463269358 0.004596798622907817 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 9891 18939 AYLKGTVLF True PC9_epitope_Rep2 1010.5800679841799 1010.57896993586 78.213 2 0.1317952418052872 0.0008686300463269358 0.004597261973420002 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 103237 7776 SPLFSQHTA True PC9_epitope_Rep4 986.48214484806 986.48104993586 37.307 2 0.13178638134180554 0.0008686300463269358 0.0045981973691041214 ['ENSG00000167721|ENST00000301364|TSR1'] 71104 20535 LYLKALEGF True PC9_epitope_Rep2 1052.5906326678798 1052.5895299358601 84.42 2 0.13178405363668833 0.0008686300463269358 0.00459844313513734 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 140969 7367 YSFTTTAER True NCI_RA007_Epitope_Rep1 1074.49818883502 1074.49708993586 32.65 2 0.1317812640469948 0.0008686300463269358 0.004598737685372637 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 106813 13874 SVALVIHNV True PC9_epitope_Rep2 950.5549158655001 950.55380993586 58.648 2 0.13178072538632485 0.0008686300463269358 0.0045987945642041025 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2'] 83307 7721 PTDPKVVVY True H1975_Epitope_Rep3 1016.5542471591598 1016.55314993586 34.682 2 0.1317759838568507 0.0008686300463269358 0.00459929526674972 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 141820 20108 YVDDQLFVFY True H1975_Epitope_Rep3 1307.60740493083 1307.60630993586 84.136 2 0.13175766370254338 0.0008686300463269358 0.004601230368454415 ['nc|ENSG00000010704|Q30201-9|HFE', 'ENST00000486147.1_1_6:26087668-26093021:+|nuORF', 'ENST00000483782.1_1_6:26087668-26091517:+|nuORF', 'nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE'] 90897 8516 REWTPMVSS True NCI_RA007_Epitope_Rep3 1091.5069796969099 1091.50588993586 40.57 2 0.13175297959164156 0.0008686300463269358 0.0046017252655116804 ['ENST00000465222.1_1_3:186501403-186502270:+|nuORF', 'ENST00000485101.5_1_3:186501406-186502392:+|nuORF', 'ENST00000443963.5_1_3:186501406-186502392:+|nuORF'] 24797 8910 FATHAAALSVR True PC9_epitope_Rep3 1142.6196413803798 1142.61799490379 39.224 3 0.13175273439618523 0.0008686300463269358 0.004601751172942167 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 105006 15879 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 66.068 3 0.13175215324749942 0.0008686300463269358 0.004601812577872633 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 8319 4929 ATIQGAYAR True NCI_RA007_Epitope_Rep2 949.4981292653698 949.49702993586 23.794 2 0.13174576567647495 0.0008686300463269358 0.004602487550200959 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 104256 9846 SQIDPSSIERA True PC9_epitope_Rep6 1201.5938801250102 1201.59278993586 48.348 2 0.1317436872309505 0.0008686300463269358 0.004602707199828669 ['ENSG00000100393|ENST00000263253|EP300'] 85781 4713 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 23.498 2 0.13174214617039104 0.0008686300463269358 0.004602870065410782 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 26052 16016 FGIDRPAEL True PC9_epitope_Rep2 1016.5290950404799 1016.52798993586 66.86 2 0.1317411186801965 0.0008686300463269358 0.004602978657932223 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 76451 15892 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.52857496793 66.277 1 0.13173675376268945 0.0008686300463269358 0.004603440001816709 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 28012 8733 FQNALLVR True NCI_RA007_Epitope_Rep3 959.5552502186699 959.55414993586 41.442 2 0.13172555817082585 0.0008686300463269358 0.004604623512669435 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 9972 22838 AYPEYLITF True PC9_epitope_Rep5 1115.55391280599 1115.55280993586 92.843 2 0.1317178833702888 0.0008686300463269358 0.004605435006092801 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP15|p.Q667E|1|0.22|ENSG00000173200|chr3:122636062-122636062|C/G|missense_variant', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 8776 18678 AVDLTLPKV True PC9_epitope_Rep2 954.57498260374 954.57388993586 77.211 2 0.13171659046445966 0.0008686300463269358 0.004605571725089704 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 77065 15887 NRLDFSTAI True PC9_epitope_Rep4 1035.53490869691 1035.53380993586 69.04 2 0.1317124971006563 0.0008686300463269358 0.004606004606345014 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32', 'ENST00000520511.1_1_8:124539464-124553254:-|nuORF', 'nc|ENSG00000156804|Q969P5-2|FBXO32', 'ENST00000521719.5_1_8:124526414-124553254:-|nuORF'] 29559 22889 FVIDGFDEL True PC9_epitope_Rep5 1053.50187723313 1053.50137496793 93.042 1 0.13170742657163942 0.0008686300463269358 0.004606540880336266 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 4021 19282 AHFDGLIFV True PC9_epitope_Rep6 1017.5283667644899 1017.52726993586 86.815 2 0.13169512277093853 0.0008686300463269358 0.004607842422132637 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11', 'FBXO11|p.S292F|1|0.25|ENSG00000138081|chr2:47834638-47834638|G/A|missense_variant'] 6698 17975 AQAGALLQV True PC9_epitope_Rep5 869.49706663621 869.49596993586 74.159 2 0.13169226717523463 0.0008686300463269358 0.004608144549477807 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 6374 5900 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 29.596 2 0.1316920447869593 0.0008686300463269358 0.0046081680793909775 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 99393 16309 SHVDLVVM[Oxidation]V True PC9_epitope_Rep5 1013.52156751233 1013.52046993586 67.728 2 0.13168407459154466 0.0008686300463269358 0.004609011448445086 ['ENSG00000031698|ENST00000234677|SARS1'] 89739 13080 RADPEAGLLLY True H1975_Epitope_Rep2 1216.6451874218799 1216.6440899358602 55.435 2 0.1316821968490158 0.0008686300463269358 0.004609210164574899 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2', 'DNA2|p.G653Vfs*4|1|0.1|ENSG00000138346|chr10:68431869-68431887|CATATCGTAGTTGTTTTTC/-|frameshift_variant', 'nc|ENSG00000138346|P51530-2|DNA2'] 37503 22257 GVVDIFQTV True PC9_epitope_Rep5 976.52294703088 976.52184993586 90.619 2 0.13167938708734586 0.0008686300463269358 0.004609507529398282 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 49410 7100 KEVEQFTQVA True NCI_RA007_Epitope_Rep3 1177.5979028762902 1177.5968099358602 35.042 2 0.13167695481114852 0.0008686300463269358 0.0046097649591598615 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 9070 15164 AVIDVGINRV True PC9_epitope_Rep4 1054.61349337078 1054.6123899358602 66.255 2 0.13167021434437132 0.0008686300463269358 0.004610478437685214 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 74016 13008 NDEELNKLLGR True PC9_epitope_Rep6 1299.67827845531 1299.67663490379 61.617 3 0.13165043231247306 0.0008860249697946033 0.004612572994506198 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6'] 25878 17023 FFKPHWDEKF True PC9_epitope_Rep5 1379.6662572196294 1379.6646149037902 70.497 3 0.13164069551134283 0.0008860249697946033 0.004613604288711035 ['ENSG00000149257|ENST00000358171|SERPINH1'] 75206 12188 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.4842749679299 51.9 1 0.13163924045556272 0.0008860249697946033 0.004613758423583095 ['ENSG00000116285|ENST00000377482|ERRFI1'] 110340 5514 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.43850993586 26.26 2 0.13163759267731925 0.0008860249697946033 0.004613932979780569 ['ENSG00000167470|ENST00000682408|MIDN'] 18838 12079 ELDPNNAVYY True H1975_Epitope_Rep1 1196.53496826656 1196.5338699358601 51.474 2 0.13163596251025786 0.0008860249697946033 0.004614105676754185 ['ENSG00000197860|ENST00000381007|SGTB'] 136810 16636 YAAELIERV True PC9_epitope_Rep3 1062.57095985246 1062.5698699358602 69.125 2 0.13163510163482178 0.0008860249697946033 0.004614196878923393 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 97754 7633 SEIQGLRTV True NCI_RA007_Epitope_Rep5 1001.55055876105 1001.54946993586 36.063 2 0.1316344592611187 0.0008860249697946033 0.004614264933916059 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF', 'ENST00000381017.6_1_9:13106966-13119674:-|nuORF'] 53446 9352 KRFDDKYTL True PC9_epitope_Rep1 1184.6189726740397 1184.61733490379 40.829 3 0.1316267403318994 0.0008860249697946033 0.004615082777736384 ['ENSG00000118363|ENST00000263672|SPCS2'] 4170 17545 AHTTVIIDL True PC9_epitope_Rep1 981.5494961318899 981.54838993586 72.28 2 0.13162668919009599 0.0008860249697946033 0.004615088196840941 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 49508 16316 KFIDPIYQVW True NCI_RA007_Epitope_Rep5 1307.69140933831 1307.6903099358601 69.515 2 0.1316237936959093 0.0008860249697946033 0.004615395020374062 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 103951 17659 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51289496793 72.938 1 0.13162326639056324 0.0008860249697946033 0.004615450898902441 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 90491 14173 RELENLIGISC True H1975_Epitope_Rep2 1245.63872214245 1245.63762993586 59.67 2 0.13161946627147825 0.0008860249697946033 0.004615853617098501 ['ENST00000462285.5_1_1:63919583-63920635:-|nuORF', 'ENST00000461681.5_1_1:63906715-63922830:-|nuORF', 'nc|ENSG00000142856|Q13352-2|ITGB3BP', 'ENSG00000142856|ENST00000271002|ITGB3BP', 'ENST00000460394.5_1_1:63917661-63988804:-|nuORF', 'nc|ENSG00000142856|Q13352-5|ITGB3BP'] 111025 12842 THDEAINVL True PC9_epitope_Rep1 1010.5032742154599 1010.50216993586 54.271 2 0.13161781708571862 0.0008860249697946033 0.004616028400583697 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 74830 10110 NHEDKIRVVL True PC9_epitope_Rep5 1221.6829699129298 1221.68131490379 43.872 3 0.13161175755888255 0.0008860249697946033 0.004616670655452533 ['ENSG00000110047|ENST00000320631|EHD1'] 34660 14250 GQDEPLIHV True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 59.637 2 0.13160737482097484 0.0008860249697946033 0.004617135240785248 ['ENSG00000157778|ENST00000288607|PSMG3'] 8371 19194 ATLNDGVVVQV True PC9_epitope_Rep5 1113.60298825673 1113.60188993586 78.869 2 0.13160669080164022 0.0008860249697946033 0.0046172077533497636 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000413279.1_1_2:136269117-136269381:-|nuORF'] 43359 6064 IGAEVYHNLK True NCI_RA007_Epitope_Rep4 1142.60840799034 1142.6067749037902 29.941 3 0.13160575143122666 0.0008860249697946033 0.004617307337389588 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 65830 15120 LSDLFSDDY True H1975_Epitope_Rep1 1073.45532096353 1073.45477496793 63.415 1 0.13160409006081256 0.0008860249697946033 0.004617483466893678 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 105866 3308 SSNLPVNNK True NCI_RA007_Epitope_Rep4 971.50360856863 971.50250993586 18.45 2 0.13160375027423366 0.0008860249697946033 0.004617519490044166 ['ENSG00000135974|ENST00000258457|C2orf49'] 127401 9226 VNELTEFAK True NCI_RA007_Epitope_Rep2 1049.53932537101 1049.5387749679298 40.496 1 0.1316016944371567 0.0008860249697946033 0.004617737449610673 ['CON__P02769'] 106722 7874 STVNVILGK True NCI_RA007_Epitope_Rep3 929.5545815123298 929.55348993586 38.091 2 0.1315829146671533 0.0008860249697946033 0.004619728947620318 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 73671 15160 MYKLSSEQF True PC9_epitope_Rep5 1131.52704643515 1131.5259499358601 63.32 2 0.1315807325804748 0.0008860249697946033 0.004619960401563927 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 40538 12065 HRFLAEDAL True PC9_epitope_Rep4 1070.55089311422 1070.5497899358602 54.215 2 0.13157546352861324 0.0008860249697946033 0.004620519337028237 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 118297 21501 TYLPTSPLL True PC9_epitope_Rep5 1003.55899818643 1003.55847496793 87.739 1 0.1315576102474441 0.0008860249697946033 0.004622413689701457 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 20789 9797 EQIAEFKEA True PC9_epitope_Rep2 1063.51858992643 1063.51748993586 43.022 2 0.1315575437335867 0.0008860249697946033 0.004622420748697809 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF'] 133673 21800 VYAPPVGGFSF True PC9_epitope_Rep2 1139.56514619603 1139.56404993586 89.326 2 0.13155594495237052 0.0008860249697946033 0.0046225904276762575 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 5436 7010 ALVAYYQK True NCI_RA007_Epitope_Rep5 954.5174677276201 954.51636993586 33.643 2 0.13155442950201413 0.0008860249697946033 0.004622751268399431 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000339471.8_1_19:39923915-39924228:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 69255 12819 LTTEVHPEL True PC9_epitope_Rep3 1037.5393253710097 1037.53822993586 54.329 2 0.13155402799562393 0.0008860249697946033 0.004622793882780191 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3', 'ERGIC3|p.Y48C|1|0.27|ENSG00000125991|chr20:35542377-35542377|A/G|missense_variant'] 9621 21304 AYANIISQF True PC9_epitope_Rep3 1025.5181960036098 1025.5170899358602 87.242 2 0.13154813859195372 0.0008860249697946033 0.004623419006457219 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 77160 8808 NRPSVQAAL True PC9_epitope_Rep1 954.5246783663799 954.52358993586 38.722 2 0.1315477230551173 0.0008860249697946033 0.004623463116261269 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 124719 15699 VHAELADVL True PC9_epitope_Rep4 965.5181960036099 965.51708993586 68.312 2 0.13154513160105683 0.0008860249697946033 0.004623738212014575 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'CCT6B|p.I363*|1|0.11|ENSG00000132141|chr17:34939308-34939309|AT/-|frameshift_variant', 'CCT6B|p.E364Rfs*28|1|0.12|ENSG00000132141|chr17:34939306-34939306|C/-|frameshift_variant', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 111335 5332 THNPTNATL True PC9_epitope_Rep3 967.47230844035 967.47120993586 25.586 2 0.13154490727954044 0.0008860249697946033 0.004623762025619083 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 137040 6541 YALTGDEVK True NCI_RA007_Epitope_Rep5 994.49712620586 994.49602993586 31.823 2 0.13154231872062408 0.0008860249697946033 0.004624036831534747 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENSG00000280969|ENST00000629237|RPS4Y2', 'ENST00000419038.2_1_2:63870904-63871126:-|nuORF', 'ENST00000486733.2_1_X:71494866-71496063:-|nuORF', 'ENST00000373626.4_1_X:71494279-71497060:-|nuORF'] 76916 18775 NRDPILVSL True PC9_epitope_Rep3 1025.58694426977 1025.58584993586 77.438 2 0.13153922122940487 0.0008860249697946033 0.004624365687739678 ['ENSG00000106789|ENST00000375077|CORO2A'] 95730 12617 RYGLVTNEI True PC9_epitope_Rep6 1063.56620882519 1063.5651099358602 59.989 2 0.13153479938618645 0.0008860249697946033 0.004624835188431336 ['ENSG00000115267|ENST00000649979|IFIH1'] 38073 10672 HAVGDIPGV True PC9_epitope_Rep4 863.45011644379 863.44900993586 48.797 2 0.13152411353537116 0.0008860249697946033 0.004625969980316352 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 49414 9204 KEVFLAQPV True NCI_RA007_Epitope_Rep3 1029.5858816406096 1029.58478993586 43.298 2 0.13151982112036564 0.0008860249697946033 0.004626425893761006 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 54844 16738 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 71.145 2 0.1315126360556595 0.0008860249697946033 0.004627189145429016 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 140910 13963 YSEGESLFY True H1975_Epitope_Rep3 1093.46040634397 1093.4598749679299 59.025 1 0.13150841937526325 0.0008860249697946033 0.004627637130739622 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 112839 14229 TLITDGMRSV True PC9_epitope_Rep6 1091.56449457303 1091.5633899358602 66.622 2 0.13150774570568857 0.0008860249697946033 0.004627708706182814 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000397477.2_1_22:32665833-32665884:+|nuORF'] 104813 7326 SRAAEKLYL True PC9_epitope_Rep4 1049.58694426977 1049.58584993586 35.507 2 0.13150648023976397 0.0008860249697946033 0.004627843161225077 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 35874 8288 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.47106993586 38.557 2 0.1315061582313319 0.0008860249697946033 0.004627877375054101 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 37998 13290 HALGLLYHV True PC9_epitope_Rep6 1021.5709002828102 1021.56980993586 62.775 2 0.13150353077673596 0.0008860249697946033 0.004628156554952932 ['ENSG00000181789|ENST00000314797|COPG1'] 3982 15532 AHDVDPIEL True PC9_epitope_Rep1 1007.4923751785899 1007.49126993586 64.569 2 0.13148795891025855 0.0008860249697946033 0.00462981148256168 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 95227 12574 RVLGENAIAV True PC9_epitope_Rep4 1040.5978433066398 1040.59674993586 56.191 2 0.1314846047376556 0.0008860249697946033 0.004630168029496055 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 7712 5032 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep1 990.4618036426001 990.46070993586 24.214 2 0.1314818597699647 0.0008860249697946033 0.004630459838371789 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 114393 15710 TPSPLPTV True PC9_epitope_Rep5 810.4487194614601 810.44762993586 65.432 2 0.13148170271813317 0.0008860249697946033 0.004630476534605729 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 122 19953 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.5056249679301 82.732 1 0.1314790742993513 0.0008860249697946033 0.0046307559715096916 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 109914 5218 TEFPSKQV True H1975_Epitope_Rep2 934.4759968384598 934.47488993586 25.139 2 0.1314619989106492 0.0008860249697946033 0.004632571723758373 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 140903 13921 YSEEIVEMY True H1975_Epitope_Rep2 1161.4899922200898 1161.48947496793 58.694 1 0.13146155093287032 0.0008860249697946033 0.004632619369988089 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 117292 14889 TVMDSKIVQV True PC9_epitope_Rep3 1118.60054572858 1118.59944993586 62.407 2 0.13145617812915017 0.0008860249697946033 0.004633190850777989 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 8194 6236 ATFGTQVVEK True NCI_RA007_Epitope_Rep3 1078.56587447202 1078.56476993586 31.534 2 0.13145403723054008 0.0008860249697946033 0.004633418587817039 ['ENSG00000125730|ENST00000245907|C3'] 54547 4797 KYIQRQETI True NCI_RA007_Epitope_Rep4 1177.64552177505 1177.64386490379 24.888 3 0.13145294238562566 0.0008860249697946033 0.004633535055669991 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 134373 15237 VYPERTPLL True PC9_epitope_Rep1 1086.60734536118 1086.6062499358602 63.429 2 0.131447139981639 0.0008860249697946033 0.004634152354292032 ['ENST00000475235.1_1_6:32782088-32784728:-|nuORF', 'ENSG00000241106|ENST00000438763|HLA-DOB'] 49042 4358 KEGKPPISV True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 21.878 2 0.13144418816103706 0.0008860249697946033 0.004634466419845521 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 85859 11319 QHFDSVM[Oxidation]QL True PC9_epitope_Rep2 1119.5018946969099 1119.5007899358602 48.861 2 0.13144346706253893 0.0008860249697946033 0.004634543145920009 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 54953 15817 KYQDVYVEL True PC9_epitope_Rep4 1155.5811901829898 1155.58008993586 68.765 2 0.13144259853438908 0.0008860249697946033 0.00463463556041517 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 71663 17289 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50939496793 71.795 1 0.1314421266685313 0.0008860249697946033 0.004634685769387848 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 90987 15225 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54470993586 63.828 2 0.1314413957687542 0.0008860249697946033 0.004634763541969976 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 111117 6831 THEEAVTAL True PC9_epitope_Rep6 969.4767251144499 969.47562993586 35.139 2 0.13143978246444699 0.0008860249697946033 0.0046349352127960635 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 8055 5990 ATDPTIHTV True PC9_epitope_Rep6 953.4818104948899 953.48070993586 31.36 2 0.13143461522582262 0.0008860249697946033 0.0046354850979927935 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 73080 18051 MREDVAEGLTL True PC9_epitope_Rep5 1232.6070876609997 1232.6059899358602 74.447 2 0.131434184554424 0.0008860249697946033 0.0046355309319165905 ['ENST00000579248.5_2_18:47017953-47018809:-|nuORF'] 85912 13198 QHGGFVVTV True PC9_epitope_Rep2 942.4923156089399 942.49120993586 56.043 2 0.13142585045395178 0.0008860249697946033 0.004636417971076606 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 7598 18652 ASFNDTFVHV True PC9_epitope_Rep1 1135.5298233164701 1135.5287299358602 76.533 2 0.1314215878616355 0.0008860249697946033 0.004636871724310962 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 137506 6401 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 29.545 1 0.13141913464463748 0.0008860249697946033 0.004637132889259552 ['ENSG00000127184|ENST00000247655|COX7C'] 64763 12048 LQAEIEGLK True PC9_epitope_Rep5 999.5600608155898 999.55896993586 51.336 2 0.1314124361818947 0.0008860249697946033 0.004637846069042165 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'KRT8|p.G326V|1|0.47|ENSG00000170421|chr12:52899779-52899779|C/A|missense_variant', 'CON__H-INV:HIT000292931'] 106696 8704 STTQVVGILK True NCI_RA007_Epitope_Rep4 1044.6179100448799 1044.6168099358601 40.27 2 0.13140254034363014 0.0008860249697946033 0.0046388998685136865 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 73907 16597 NAYTGIVLL True H1975_Epitope_Rep1 962.54368247546 962.5431349679301 69.218 1 0.13139900909879068 0.0008860249697946033 0.0046392759649082115 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 55222 10589 LADDSVRSL True PC9_epitope_Rep3 974.50327421546 974.50216993586 45.676 2 0.13139890318375022 0.0008860249697946033 0.004639287245888514 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 57588 4854 LEDVSKPPA True H1975_Epitope_Rep2 954.5022115863 954.50110993586 23.758 2 0.13139523580882337 0.0008860249697946033 0.004639677873600875 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 85270 18113 QEQLLAILP True H1975_Epitope_Rep2 1023.5964463243098 1023.5953499358601 75.061 2 0.13139321161728945 0.0008860249697946033 0.00463989349273564 ['ENSG00000171222|ENST00000305978|SCAND1'] 17677 17562 EHLQVITTL True PC9_epitope_Rep3 1052.5866099166 1052.58550993586 72.739 2 0.13139075737131542 0.0008860249697946033 0.004640154934989907 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 43928 11587 IIDENGVHEL True PC9_epitope_Rep4 1137.56660274801 1137.56550993586 52.329 2 0.13138544302790559 0.0008860249697946033 0.004640721103180333 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 97866 10279 SELPVSEVA True H1975_Epitope_Rep1 929.47057710485 929.47002496793 44.483 1 0.1313834754551219 0.0008860249697946033 0.004640930737519724 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 11907 19102 DHLLSVSL True PC9_epitope_Rep2 882.4810822189 882.48053496793 78.847 1 0.13138223682907504 0.0008860249697946033 0.00464106271127492 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 31187 17420 GAYTQVIFL True H1975_Epitope_Rep2 1010.54368247546 1010.5431749679301 72.298 1 0.13138152725988653 0.0008860249697946033 0.004641138316477935 ['ENSG00000171298|ENST00000302262|GAA'] 73127 17040 MRMLAEDEL True PC9_epitope_Rep5 1106.51001647202 1106.5089099358602 70.563 2 0.1313779179001092 0.0008860249697946033 0.004641522915630506 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 29000 12370 FTEEQAVLY True H1975_Epitope_Rep3 1098.5233409536997 1098.52277496793 52.767 1 0.13137536437930544 0.0008860249697946033 0.004641795027709067 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 135160 12023 WELVTREVP True H1975_Epitope_Rep3 1127.59750895347 1127.59640993586 51.408 2 0.13137414875178322 0.0008860249697946033 0.0046419245747377855 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 57509 12214 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49624496793 52.064 1 0.13136945526722915 0.0008860249697946033 0.0046424247835628344 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 17319 19620 EHALLAYTL True PC9_epitope_Rep3 1029.5494961318898 1029.54838993586 80.705 2 0.13136621021262937 0.0008860249697946033 0.0046427706567986 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 73038 15486 M[Oxidation]RDPIRILV True PC9_epitope_Rep5 1127.64849936095 1127.64685490379 64.576 3 0.13136468642723462 0.0008860249697946033 0.004642933077797892 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 75086 5613 NHVNSGCQL True PC9_epitope_Rep5 970.42906372938 970.42796993586 26.593 2 0.13136355976193312 0.0008860249697946033 0.004643053173180223 ['ENSG00000177606|ENST00000371222|JUN'] 88959 12450 QVIDGFFVK True NCI_RA007_Epitope_Rep4 1051.57023157647 1051.56912993586 54.896 2 0.13133121561197145 0.0008860249697946033 0.004646502160025496 ['ENSG00000172732|ENST00000308110|MUS81', 'ENST00000530928.5_1_11:65631499-65632379:+|nuORF'] 45302 19246 IPYHIVNIV True PC9_epitope_Rep2 1066.6175161220601 1066.61640993586 79.403 2 0.13132928418484233 0.0008860249697946033 0.004646708195717599 ['ENSG00000031698|ENST00000234677|SARS1'] 2777 8606 AETSPAPIP True H1975_Epitope_Rep3 881.44944773745 881.4488949679301 38.094 1 0.1313292278311471 0.0008860249697946033 0.004646714207403693 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 70462 16342 LVTYVPVTTF True NCI_RA007_Epitope_Rep4 1138.62741209942 1138.62630993586 70.857 2 0.1313286501237179 0.0008860249697946033 0.00464677583638133 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 49354 12122 KESEVFYEL True NCI_RA007_Epitope_Rep5 1142.54955570154 1142.5484499358602 53.281 2 0.13132833770892244 0.0008860249697946033 0.004646809164667048 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion', 'HIF1A|p.P45Hfs*6|1|0.31|ENSG00000100644|chr14:61720479-61720479|C/-|frameshift_variant'] 11818 16799 DHFNAMTSL True PC9_epitope_Rep3 1034.4491304676199 1034.4480299358602 69.765 2 0.13132340212696353 0.0008860249697946033 0.004647335721831767 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 78556 17533 NYQGHFHLF True PC9_epitope_Rep3 1161.5355774032498 1161.53392490379 72.624 3 0.13132011834395635 0.0008860249697946033 0.004647686087850922 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 8790 12092 AVDPRFLAY True H1975_Epitope_Rep3 1050.5498304850598 1050.5487299358601 51.676 2 0.1313198905946862 0.0008860249697946033 0.004647710388717901 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 66114 14155 LSELEAALQR True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 62.349 2 0.13131826788405906 0.0008860249697946033 0.0046478835357067075 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 13985 17161 DRDPNSLLI True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 70.831 2 0.13131641276824482 0.0008860249697946033 0.0046480814886537105 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'nc|ENSG00000168477|P22105-2|TNXB', 'ENST00000507684.1_1_6:31976393-31978991:-|nuORF'] 77675 15596 NTIDRLIQA True PC9_epitope_Rep3 1042.57710786206 1042.5760099358602 65.138 2 0.13131628364565 0.0008860249697946033 0.004648095267185236 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 105285 6806 SRLSSTSSL True PC9_epitope_Rep5 936.4876241513201 936.48652993586 31.151 2 0.13130411270132333 0.0008860249697946033 0.0046493941960792365 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 140021 12874 YQEELSREL True PC9_epitope_Rep1 1165.5615173675699 1165.5604299358602 54.394 2 0.1312995018317632 0.0008860249697946033 0.0046498863787959085 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 138509 17405 YHSFVSSVF True PC9_epitope_Rep6 1071.5025459394699 1071.5014499358601 79.563 2 0.1312982557831268 0.0008860249697946033 0.004650019395836809 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 76940 7598 NRDRTQIAL True PC9_epitope_Rep3 1085.59415490853 1085.59304993586 34.224 2 0.13128940802457226 0.0008860249697946033 0.004650964011463068 ['ENSG00000241685|ENST00000262942|ARPC1A'] 105425 19003 SRSWLSYSY True PC9_epitope_Rep5 1147.5298233164701 1147.5287299358602 78.122 2 0.1312842584292781 0.0008860249697946033 0.0046515138861238795 ['ENSG00000189091|ENST00000302516|SF3B3'] 118164 23459 TYIQILESF True PC9_epitope_Rep5 1112.57537652656 1112.57426993586 95.219 2 0.13128289153190398 0.0008860249697946033 0.004651659854414167 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM', 'FANCM|p.D696Tfs*8|1|0.16|ENSG00000187790|chr14:45170670-45170670|G/-|frameshift_variant'] 35163 17434 GQWYGPNTV True PC9_epitope_Rep1 1020.4664947839199 1020.46538993586 71.858 2 0.13128135923872952 0.0008860249697946033 0.004651823490362515 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 77664 8366 NTIDPSHPM True PC9_epitope_Rep2 1010.4491304676201 1010.44802993586 37.551 2 0.1312792801081315 0.0008860249697946033 0.004652045532989724 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 39482 16398 HLDLGILYY True H1975_Epitope_Rep2 1105.58079626017 1105.5796899358602 68.295 2 0.13127464010473164 0.0008860249697946033 0.004652541103991392 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 120594 7025 VEHGSVALP True H1975_Epitope_Rep2 907.4763311916299 907.4752299358599 31.947 2 0.1312686764893497 0.0008860249697946033 0.004653178118450455 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 57666 11500 LEEETENIIAA True H1975_Epitope_Rep2 1230.59796244594 1230.59686993586 49.292 2 0.13126818199340637 0.0008860249697946033 0.004653230942794623 ['nc|ENSG00000071539|Q15645-2|TRIP13', 'ENST00000512024.5_1_5:893053-908577:+|nuORF', 'ENSG00000071539|ENST00000166345|TRIP13'] 47825 14198 IYGYVAEQF True NCI_RA007_Epitope_Rep5 1088.5178616504397 1088.51676993586 61.304 2 0.13126742093697974 0.0008860249697946033 0.004653312243517044 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 22405 2731 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56219490379 14.574 3 0.13126624870887957 0.0008860249697946033 0.004653437470861068 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 14324 3982 DSYVGDEAQSK True H1975_Epitope_Rep3 1197.51496109797 1197.5138699358602 20.443 2 0.1312606883085421 0.0008860249697946033 0.004654031525194402 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 53269 15441 KQIETGPFL True PC9_epitope_Rep5 1031.5651461960297 1031.56404993586 64.403 2 0.13125806351878697 0.0008860249697946033 0.004654311974796427 ['ENSG00000139433|ENST00000318348|GLTP'] 48657 12351 KASDLYITL True NCI_RA007_Epitope_Rep4 1022.56481184286 1022.56370993586 54.504 2 0.13125785679902216 0.0008860249697946033 0.00465433406278729 ['ENSG00000143418|ENST00000368954|CERS2'] 29336 19969 FVDEYDPTI True PC9_epitope_Rep5 1097.49170647225 1097.49117496793 81.862 1 0.13125163590558528 0.0008860249697946033 0.004654998813085641 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 141289 8661 YTDMESEDY True H1975_Epitope_Rep2 1151.39648575807 1151.39538993586 38.273 2 0.13124692556981088 0.0008860249697946033 0.004655502210905157 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 33406 13588 GLADNTVIAKV True PC9_epitope_Rep6 1099.62372370131 1099.62262993586 64.012 2 0.13124225983767046 0.0008860249697946033 0.00465600089476509 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 5267 16305 ALPSKLPTF True PC9_epitope_Rep6 972.56441792004 972.56332993586 75.079 2 0.13124224121765624 0.0008860249697946033 0.004656002885019177 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 97581 7804 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 35.001 1 0.13124103764465425 0.0008860249697946033 0.004656131534179085 ['nc|ENSG00000128951|P33316-2|DUT'] 92280 21176 RLLDLENIQI True PC9_epitope_Rep2 1225.70303665117 1225.70192993586 86.908 2 0.13123788948141213 0.0008860249697946033 0.004656468055924518 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 71156 20306 LYMDKFEEF True PC9_epitope_Rep5 1220.5423621461198 1220.54126993586 83.151 2 0.13123697988676467 0.0008860249697946033 0.0046565652911695265 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG', 'ENST00000445715.5_1_Y:21755293-21766003:+|nuORF'] 88249 7249 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.4433499358602 32.817 2 0.13123114816876696 0.0008860249697946033 0.004657188746638078 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 35810 15204 GTITQVIKV True PC9_epitope_Rep3 957.58588164061 957.58478993586 63.627 2 0.1312284275732781 0.0008860249697946033 0.004657479627332093 ['ENSG00000166747|ENST00000299980|AP1G1', 'nc|ENSG00000166747|O43747-2|AP1G1'] 100171 10350 SITSVFITK True NCI_RA007_Epitope_Rep3 994.5698972233 994.56880993586 47.775 2 0.13122803791126 0.0008860249697946033 0.004657521290690428 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 125874 19068 VLAPLPLHGV True PC9_epitope_Rep5 1014.6226015025001 1014.62150993586 78.374 2 0.1312255055737672 0.0008860249697946033 0.0046577920616808575 ['nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 116916 9205 TVFSHAQTV True PC9_epitope_Rep3 988.4977949121999 988.49668993586 40.342 2 0.13122256602059798 0.0008860249697946033 0.004658106393785747 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 54476 13510 KYGQGFYLI True NCI_RA007_Epitope_Rep4 1087.5702315764697 1087.56912993586 59.174 2 0.13121333221940001 0.0008860249697946033 0.004659093917933971 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF'] 118331 12756 TYMKDLYQL True NCI_RA007_Epitope_Rep2 1173.5739966275698 1173.57288993586 54.236 2 0.13121302965416454 0.0008860249697946033 0.004659126279763245 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 88710 12718 QTHSVFVNV True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 53.792 2 0.1312113596618066 0.0008860249697946033 0.004659304903103668 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 25582 13353 FELDTSVTP True H1975_Epitope_Rep2 1007.48114178855 1007.48057496793 56.494 1 0.13121020911251224 0.0008860249697946033 0.004659427970441139 ['ENSG00000241945|ENST00000291576|PWP2'] 41136 13425 HVADDFVAV True PC9_epitope_Rep4 971.4712458111899 971.47014993586 59.539 2 0.13120846941267048 0.0008860249697946033 0.004659614061750725 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF'] 35892 4227 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 23.295 2 0.13120809266103162 0.0008860249697946033 0.004659654362888938 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 116451 9377 TTLDEKIEKV True PC9_epitope_Rep1 1174.64451871554 1174.64287490379 40.926 3 0.13120395781791128 0.0008860249697946033 0.004660096689791884 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 3269 5143 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 25.161 2 0.1312024716636443 0.0008860249697946033 0.004660255681990315 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 133963 11712 VYINTAQEF True NCI_RA007_Epitope_Rep3 1083.5236753068698 1083.52256993586 53.181 2 0.131202414504314 0.0008860249697946033 0.004660261797133539 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 117950 15027 TYADTLNHL True PC9_epitope_Rep3 1046.5032742154601 1046.5021699358601 62.93 2 0.13119683875146051 0.0008860249697946033 0.004660858352392662 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 136015 12079 WQYRQLSAL True NCI_RA007_Epitope_Rep4 1163.60874234351 1163.60764993586 53.462 2 0.13119609901937784 0.0008860249697946033 0.004660937502704854 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 450 16849 AALPVNVKI True PC9_epitope_Rep5 923.5804023373499 923.57930993586 69.819 2 0.13118471245117605 0.0008860249697946033 0.004662156016864814 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 29915 18844 FVWSGTAEA True PC9_epitope_Rep5 966.4446967101799 966.44414496793 77.5 1 0.13118269351326126 0.0008860249697946033 0.004662372102811397 ['ENSG00000124422|ENST00000261497|USP22'] 104099 20226 SQDYPTLAF True PC9_epitope_Rep4 1040.48147614172 1040.4803699358602 85.939 2 0.13117560059555475 0.0008860249697946033 0.004663131332577414 ['ENSG00000134697|ENST00000373062|GNL2'] 130991 14720 VTDPRVVDLLV True H1975_Epitope_Rep2 1224.70778767844 1224.7066899358601 61.781 2 0.1311739257101792 0.0008860249697946033 0.004663310630992974 ['ENSG00000184983|ENST00000498737|NDUFA6'] 44027 19244 IIIPEIQKV True PC9_epitope_Rep1 1051.66413196131 1051.66302993586 78.822 2 0.13117297246705154 0.0008860249697946033 0.004663412679804249 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 43751 17566 IHIITGVAV True PC9_epitope_Rep1 921.5647522732099 921.56364993586 72.361 2 0.13117031618932556 0.0008860249697946033 0.004663697057462163 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 47684 19907 IYADLNQNDF True PC9_epitope_Rep5 1211.5458673034302 1211.5447699358601 81.626 2 0.13116540421726328 0.0008860249697946033 0.004664222971842455 ['ENSG00000064763|ENST00000536681|FAR2', 'FAR2|p.A81D|1|0.21|ENSG00000064763|chr12:29293352-29293352|C/A|missense_variant'] 15276 7313 EAESSPFVER True PC9_epitope_Rep6 1149.5302172392899 1149.52912993586 37.294 2 0.13115779421528345 0.0008860249697946033 0.004665037873909293 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 28295 20840 FRQIIAVVL True PC9_epitope_Rep5 1057.6648006676498 1057.6637099358602 85.211 2 0.13115741280170637 0.0008860249697946033 0.0046650787205213306 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 23715 22889 EYFESPFTI True PC9_epitope_Rep1 1131.5124419168299 1131.5113499358602 92.838 2 0.13115603724207264 0.0008860249697946033 0.004665226035851227 ['ENSG00000198938|ENST00000362079|MT-CO3'] 138133 19413 YGIPAIVKL True PC9_epitope_Rep4 972.60080342876 972.59970993586 82.782 2 0.13114672704048377 0.0008860249697946033 0.004666223230820313 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 23952 16890 EYLLKVNEI True PC9_epitope_Rep6 1119.61757569171 1119.61646993586 77.484 2 0.13113047199898742 0.0008860249697946033 0.004667964775488273 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 105044 12641 SRDPIVMGV True PC9_epitope_Rep4 972.50625142092 972.50514993586 56.464 2 0.13113032632011024 0.0008860249697946033 0.004667980386234163 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.T1113M|1|0.07|ENSG00000158417|chr2:99396843-99396843|C/T|missense_variant'] 106556 7067 STMGYMMAK True NCI_RA007_Epitope_Rep3 1018.4285953471799 1018.42748993586 34.914 2 0.13112825276027296 0.0008860249697946033 0.004668202591598375 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 139988 5177 YQDPHSTAV True PC9_epitope_Rep5 1016.45632402304 1016.45522993586 24.931 2 0.13112814840706866 0.0008860249697946033 0.004668213774498599 ['ENSG00000146648|ENST00000275493|EGFR'] 17777 18479 EHSLPTLGL True PC9_epitope_Rep3 965.51819600361 965.5176449679301 76.287 1 0.13112222679637714 0.0008860249697946033 0.004668848400853367 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 22184 20317 ESVAILPQL True PC9_epitope_Rep2 968.55424715916 968.55314993586 83.574 2 0.13111858151387643 0.0008860249697946033 0.00466923911255642 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 29540 8315 FVHPGAATV True PC9_epitope_Rep2 897.4708518883699 897.46974993586 37.348 2 0.13111727242691756 0.0008860249697946033 0.004669379432064513 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 24625 22111 FAISILQQL True PC9_epitope_Rep4 1031.60153170475 1031.60097496793 93.267 1 0.1311169223518758 0.0008860249697946033 0.004669416956904897 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 47923 8942 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.6890249037901 41.055 3 0.13111546999983986 0.0008860249697946033 0.004669572638923049 ['ENSG00000103479|ENST00000262133|RBL2'] 30170 11180 FYQEHPDL True PC9_epitope_Rep2 1047.4661604307498 1047.4650699358601 48.33 2 0.13110578977955864 0.0008860249697946033 0.004670610421705765 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 2056 7641 AELATRALP True H1975_Epitope_Rep3 940.5341804209199 940.53308993586 34.374 2 0.13110231054221458 0.0008860249697946033 0.004670983474153841 ['ENSG00000173801|ENST00000393931|JUP'] 36698 18283 GVISKTFQL True PC9_epitope_Rep1 991.57023157647 991.56912993586 75.115 2 0.1310966553431632 0.0008860249697946033 0.004671589901234986 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 41521 10905 HYPLNTVTF True NCI_RA007_Epitope_Rep3 1090.54474510462 1090.54364993586 49.969 2 0.13109655508943685 0.0008860249697946033 0.00467160065249775 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 101591 23242 SLLPAIVEL True PC9_epitope_Rep5 953.57973363101 953.57862993586 94.384 2 0.13108568977371893 0.0008860249697946033 0.004672765999190145 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 104111 4943 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.875 2 0.1310856089045917 0.0008860249697946033 0.00467277467378702 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 120263 6725 VEDARGFTP True H1975_Epitope_Rep3 990.4770594676199 990.47596993586 30.825 2 0.13108539124528681 0.0008860249697946033 0.00467279802154855 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 40983 11059 HTDVGLLEY True H1975_Epitope_Rep1 1045.50802524273 1045.5069299358602 47.499 2 0.1310802896977623 0.0008860249697946033 0.004673345284523087 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 74155 8891 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.5032299358602 39.197 2 0.13108019977053142 0.0008860249697946033 0.004673354931935436 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 54133 16636 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5589699358602 69.236 2 0.13107756316105657 0.0008860249697946033 0.004673637796677218 ['ENSG00000105372|ENST00000598742|RPS19'] 128947 20992 VQIGDIVTV True PC9_epitope_Rep5 942.5385970950199 942.5380449679301 85.808 1 0.13107617706880667 0.0008860249697946033 0.004673786508294408 ['ENSG00000142534|ENST00000270625|RPS11'] 216 8293 AAFHQIEAV True NCI_RA007_Epitope_Rep4 984.5028802926398 984.50178993586 38.709 2 0.13107498538493328 0.0008860249697946033 0.004673914365874615 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'RABAC1|p.E178Rfs*?|1|0.15|ENSG00000105404|chr19:41956872-41956872|C/-|frameshift_variant'] 110096 13697 TEMDPVIIA True H1975_Epitope_Rep2 987.4946836777099 987.4941349679301 57.829 1 0.13107375591275863 0.0008860249697946033 0.004674046281430297 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 2849 4975 AEVEHVVNA True H1975_Epitope_Rep2 966.4770594676199 966.47596993586 24.219 2 0.13106950242601112 0.0008860249697946033 0.004674502685295255 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 134426 20193 VYPLMKEYF True PC9_epitope_Rep2 1188.5889184157197 1188.58782993586 83.087 2 0.1310694069813738 0.0008860249697946033 0.0046745129271147014 ['ENSG00000100109|ENST00000407690|TFIP11'] 68621 22811 LTIDDGIFEV True PC9_epitope_Rep3 1120.56520576568 1120.5641099358602 93.013 2 0.1310666733333527 0.0008860249697946033 0.004674806274397403 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 109786 5885 TEEAAVAIKA True H1975_Epitope_Rep1 1001.5393253710098 1001.53822993586 27.706 2 0.13106085731792533 0.0008860249697946033 0.004675430450310002 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 115933 3927 TSGPTTPLK True NCI_RA007_Epitope_Rep3 900.4916469026 900.49054993586 21.778 2 0.13105714264413135 0.0008860249697946033 0.004675829152786964 ['ENSG00000188112|ENST00000341865|C6orf132'] 21732 8777 ERTIHTDVL True PC9_epitope_Rep5 1082.57202248162 1082.57092993586 38.703 2 0.1310523884039475 0.0008860249697946033 0.00467633948261572 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF', 'ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33'] 2206 6022 AEMGTHTVSV True H1975_Epitope_Rep2 1030.4753452154598 1030.4742499358601 28.142 2 0.1310484136458308 0.0008860249697946033 0.004676766183359617 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF'] 68107 5775 LTDPDGALAK True H1975_Epitope_Rep3 999.5236753068699 999.52256993586 27.239 2 0.13103734700998093 0.0008860249697946033 0.004677954417892062 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 68639 22844 LTIEDGIFEV True PC9_epitope_Rep5 1134.58085582982 1134.5802749679299 92.865 1 0.13103692215073992 0.0008860249697946033 0.004678000041333475 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 132188 11246 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 49.898 2 0.13103346207346236 0.0008860249697946033 0.004678371617496655 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 141987 21971 YVITDLTQL True PC9_epitope_Rep3 1064.57537652656 1064.5748749679299 89.813 1 0.13103332505109985 0.0008860249697946033 0.004678386332865778 ['ENSG00000134070|ENST00000256458|IRAK2'] 32828 5587 GHLKVVQSL True NCI_RA007_Epitope_Rep3 979.5814649665099 979.58036993586 28.969 2 0.13102574782673118 0.0008860249697946033 0.004679200151694646 ['ENSG00000145780|ENST00000274457|FEM1C'] 121648 10990 VFIDKQTNL True PC9_epitope_Rep6 1076.5866099166 1076.58550993586 53.164 2 0.13102229039009444 0.0008860249697946033 0.004679571538093974 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 114487 19556 TPYNYPVPV True PC9_epitope_Rep1 1048.5229470308798 1048.52184993586 80.047 2 0.13102063892972432 0.0008860249697946033 0.004679748942746903 ['ENSG00000170906|ENST00000485876|NDUFA3'] 140084 20571 YQLEIPENFTT True PC9_epitope_Rep4 1353.6452469915296 1353.64414993586 87.278 2 0.13101010760491447 0.0008860249697946033 0.004680880403970022 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 41633 7071 IAEKETLEY True H1975_Epitope_Rep1 1094.54955570154 1094.5484499358602 32.225 2 0.13100734792055585 0.0008860249697946033 0.004681176942639984 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14', 'nc|ENSG00000185842|Q0VDD8-2|DNAH14', 'ENST00000498360.5_1_1:225142255-225148920:+|nuORF', 'nc|ENSG00000185842|Q0VDD8-3|DNAH14'] 71263 19933 LYPQFMFHL True PC9_epitope_Rep6 1194.5895871220598 1194.58848993586 89.332 2 0.13100377359765858 0.0008860249697946033 0.0046815610448496 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 95183 21909 RVIDYILDL True PC9_epitope_Rep2 1118.63356010902 1118.6324699358602 89.749 2 0.13100325658960016 0.0008860249697946033 0.0046816166058967525 ['ENSG00000117318|ENST00000374561|ID3'] 103961 18652 SQANRLFYL True PC9_epitope_Rep2 1110.5821932425 1110.58108993586 77.11 2 0.13099814761206313 0.0008860249697946033 0.0046821656847600025 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 13952 20466 DRDDFPVVL True PC9_epitope_Rep2 1074.53457434374 1074.53346993586 84.151 2 0.13099767154177708 0.0008860249697946033 0.004682216852852813 ['ENSG00000126458|ENST00000246792|RRAS'] 111496 18434 THYDHVLIEL True PC9_epitope_Rep3 1238.6295373577398 1238.62789490379 76.11 3 0.1309906205209238 0.0008860249697946033 0.0046829747619324975 ['ENSG00000076003|ENST00000264156|MCM6'] 2991 18098 AFIEKHWTF True PC9_epitope_Rep1 1177.59202965021 1177.5903749037902 74.406 3 0.13098990157141113 0.0008860249697946033 0.0046830520480788075 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 131576 20127 VTLGPVPEI True PC9_epitope_Rep4 923.53278343859 923.5322349679301 85.553 1 0.13098526584138354 0.0008860249697946033 0.004683550413252037 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 107306 10191 SVLDSTAKV True PC9_epitope_Rep1 918.5022115863 918.50110993586 44.078 2 0.13098393807083256 0.0008860249697946033 0.004683693165139945 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 1936 9335 AEILSEMRA True H1975_Epitope_Rep2 1018.51173072418 1018.51062993586 40.868 2 0.13098331084894613 0.0008860249697946033 0.004683760600802878 ['ENSG00000111331|ENST00000228928|OAS3', 'OAS3|p.S104L|1|0.12|ENSG00000111331|chr12:112941703-112941703|C/T|missense_variant'] 96410 7836 [Acetylation]-SAAEAGGVFHR True H1975_Epitope_Rep1 1142.5468706792399 1142.54576993586 35.091 2 0.1309832481331042 0.0008860249697946033 0.0046837673437394025 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 106145 10925 STDLQDYTY True H1975_Epitope_Rep3 1104.46113461996 1104.4600299358601 47.109 2 0.13098200680331576 0.0008860249697946033 0.0046839008081258175 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 89877 6941 RAYADEVAV True NCI_RA007_Epitope_Rep5 992.4927095317598 992.49160993586 33.383 2 0.1309743280914931 0.0008860249697946033 0.00468472648549489 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 108581 21046 SYNVTSVLF True PC9_epitope_Rep4 1028.51786165044 1028.51676993586 89.112 2 0.1309651709360359 0.0008860249697946033 0.004685711324539151 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2'] 17601 11884 EHINEGETAML True PC9_epitope_Rep2 1242.55505208814 1242.5539499358601 51.036 2 0.13096075533057458 0.0008860249697946033 0.004686186289497195 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 40119 18303 HPYLFPVAA True PC9_epitope_Rep2 1013.5334521449298 1013.53234993586 75.73 2 0.13095738695996628 0.0008860249697946033 0.004686548640437726 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 49413 10057 KEVFLAQPV True NCI_RA007_Epitope_Rep1 1029.5858816406096 1029.58478993586 43.127 2 0.1309560527681359 0.0008860249697946033 0.00468669217314893 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 87977 17184 QRMTTQLLL True PC9_epitope_Rep5 1102.6168644990598 1102.61576993586 71.119 2 0.13095283843958455 0.0008860249697946033 0.004687037989248942 ['ENSG00000110195|ENST00000393676|FOLR1'] 140839 16608 YSDPNQIWIY True H1975_Epitope_Rep3 1297.59790287629 1297.5968099358602 69.382 2 0.13095229746991527 0.0008860249697946033 0.004687096192372934 ['ENSG00000178234|ENST00000430044|GALNT11'] 95158 8938 RVFVVGVGMTK True NCI_RA007_Epitope_Rep4 1191.67979910879 1191.67870993586 41.214 2 0.1309522298917278 0.0008860249697946033 0.004687103463184794 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 118534 7751 TYQEVAQKF True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.5496749679298 37.612 1 0.13095089044753677 0.0008860249697946033 0.004687247577757428 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 138260 10703 YGYHDFGSS True PC9_epitope_Rep5 1031.3984747937498 1031.39736993586 46.158 2 0.13095051982220884 0.0008860249697946033 0.004687287455151103 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 138334 8199 YHEGSAPAL True PC9_epitope_Rep1 943.4399456829099 943.43884993586 36.371 2 0.13094807787392568 0.0008860249697946033 0.004687550204677126 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 129692 11761 VRPPVQVY True PC9_epitope_Rep3 956.5443511817998 956.54324993586 50.258 2 0.13094793600055746 0.0008860249697946033 0.0046875654704586905 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 17449 16542 EHEDVIQIV True PC9_epitope_Rep1 1080.54513902744 1080.5440499358601 68.453 2 0.1309443030637699 0.0008860249697946033 0.00468795639644318 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF', 'ENST00000497744.1_1_17:18007908-18010551:+|nuORF'] 33726 11070 GLIDHQTYL True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 47.613 2 0.1309416643333085 0.0008860249697946033 0.004688240359942008 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 128041 9657 VPKNSDPWAA True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 42.002 2 0.13094054474084932 0.0008860249697946033 0.0046883608485270385 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 134459 12837 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 54.387 2 0.13092289091170983 0.0008860249697946033 0.004690261126039121 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 140946 9923 YSEVYPGQQY True H1975_Epitope_Rep1 1232.5349682665599 1232.53437496793 43.104 1 0.13091227562816043 0.0008860249697946033 0.004691404131992051 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 40510 3764 HRDTTVQTL True PC9_epitope_Rep4 1069.5516213902101 1069.5505299358601 20.629 2 0.13091144271875504 0.0008860249697946033 0.004691493827534689 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 132242 14970 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 69.593 2 0.13090867842971418 0.0008860249697946033 0.004691791524362716 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 76507 16768 NQIKEFIYA True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 69.644 2 0.13090508868078032 0.0008860249697946033 0.004692178145883309 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 28852 7117 FTATRPGVY True H1975_Epitope_Rep3 1010.5185303567798 1010.51742993586 32.346 2 0.13090396964882758 0.0008860249697946033 0.004692298673773299 ['ENSG00000198712|ENST00000361739|MT-CO2'] 95070 18763 RTVELFYDV True PC9_epitope_Rep4 1140.5815245361598 1140.5804299358601 80.255 2 0.13089849383961416 0.0008860249697946033 0.004692888502269508 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF', 'ENST00000489654.1_1_7:142960606-142961286:+|nuORF', 'ENST00000473649.1_1_7:142960606-142961786:+|nuORF', 'nc|ENSG00000197448|Q9Y2Q3-4|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-3|GSTK1', 'ENSG00000197448|ENST00000358406|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-2|GSTK1'] 47888 12533 IYIGGQEHF True PC9_epitope_Rep6 1062.5134449763398 1062.5123499358601 59.643 2 0.13089830004615885 0.0008860249697946033 0.004692909378129819 ['ENSG00000158125|ENST00000379416|XDH'] 27603 12944 FNPFVTSDR True PC9_epitope_Rep6 1081.51925863277 1081.5181699358602 61.335 2 0.13089703184186713 0.0008860249697946033 0.004693045994163295 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 118191 20665 TYKDYVDLF True PC9_epitope_Rep3 1162.55464108198 1162.55354993586 84.761 2 0.13088845264762733 0.0008860249697946033 0.004693970282128088 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 139186 6719 YLENPEIK True H1975_Epitope_Rep3 1004.5178616504398 1004.51676993586 30.801 2 0.13088469538642003 0.0008860249697946033 0.004694375130827051 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 115431 20942 TRLSNIFVI True PC9_epitope_Rep1 1061.62332977849 1061.62222993586 85.374 2 0.13088408594482898 0.0008860249697946033 0.004694440802016961 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF'] 97569 7755 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43364496793 34.789 1 0.13088351271872306 0.0008860249697946033 0.004694502571584843 ['nc|ENSG00000128951|P33316-2|DUT'] 65839 9994 LSDLGKLSY True H1975_Epitope_Rep2 994.5335117145801 994.53240993586 43.432 2 0.13087845655686767 0.0008860249697946033 0.004695047446991545 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 84336 22367 PYTPFLTEL True PC9_epitope_Rep2 1079.55391280599 1079.55280993586 91.525 2 0.13087243644480887 0.0008860249697946033 0.004695696283366209 ['ENSG00000196305|ENST00000443024|IARS1'] 48155 12830 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 54.225 3 0.13086245823455525 0.0008860249697946033 0.004696771910633399 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 29378 19795 FVDPAQITM True PC9_epitope_Rep4 1020.49501803088 1020.49392993586 84.267 2 0.13086242799705589 0.0008860249697946033 0.004696775170532488 ['ENSG00000167325|ENST00000300738|RRM1'] 111329 5138 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 24.615 2 0.13085375874118257 0.0008860249697946033 0.004697709893281131 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 132701 12645 VVHDGFEGL True PC9_epitope_Rep4 971.47124581119 971.47014993586 56.479 2 0.13084967496829092 0.0008860249697946033 0.0046981502708379735 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 48190 21165 IYPSPTGVLI True PC9_epitope_Rep2 1058.60119735158 1058.60010993586 86.866 2 0.13084697150570276 0.0008860249697946033 0.004698441823679437 ['ENSG00000174231|ENST00000304992|PRPF8'] 122403 15318 VGDPSVHLL True PC9_epitope_Rep5 935.5076313199099 935.50652993586 63.932 2 0.1308313803801813 0.0008860249697946033 0.0047001235843522424 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 53866 17330 KTIEDTLMTV True PC9_epitope_Rep6 1149.59512599497 1149.5940299358601 79.273 2 0.13081974608782707 0.0008860249697946033 0.004701378921394688 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 106832 7584 SVAQVVLSR True NCI_RA007_Epitope_Rep3 957.5607295219299 957.55962993586 36.963 2 0.1308176143588247 0.0008860249697946033 0.004701608970177508 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3', 'ENST00000493581.1_1_9:33443725-33447528:-|nuORF', 'ENST00000463983.5_1_9:33443205-33447528:-|nuORF'] 105041 19592 SRDPIIFSV True PC9_epitope_Rep3 1032.56039516876 1032.55928993586 80.597 2 0.1308119475072418 0.0008860249697946033 0.00470222057100831 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000565049.1_1_16:33499109-33500962:-|nuORF', 'ENST00000554269.1_1_15:20362738-20365460:+|nuORF'] 18128 12710 EIIRQLNGV True PC9_epitope_Rep2 1040.59784330664 1040.59674993586 54.195 2 0.13080403623040016 0.0008860249697946033 0.004703074534812702 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 20738 7501 EQEVNILK True NCI_RA007_Epitope_Rep2 971.5287606873098 971.52766993586 33.803 2 0.13079753314878254 0.0008860249697946033 0.004703776608736163 ['ENSG00000100345|ENST00000216181|MYH9'] 75108 11352 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56036993586 51.443 2 0.1307968570159541 0.0008860249697946033 0.004703849610087845 ['ENSG00000171223|ENST00000302754|JUNB'] 25632 5292 FENVGSPKP True H1975_Epitope_Rep2 973.4868958753299 973.48578993586 25.411 2 0.1307924586226939 0.0008860249697946033 0.004704324527229626 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 127280 18089 VMAPRALLL True PC9_epitope_Rep4 982.5997578829398 982.59866993586 77.646 2 0.1307898684415487 0.0008860249697946033 0.004704604224501892 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 96087 20068 RYLTVATVF True PC9_epitope_Rep3 1068.59678067748 1068.59568993586 82.441 2 0.13076709856017124 0.0008860249697946033 0.004707063704814247 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 108042 22835 SYADQMFLL True PC9_epitope_Rep2 1086.50558271458 1086.5044899358602 93.324 2 0.13076580248683178 0.0008860249697946033 0.004707203737779616 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 32845 11571 GHNLQTVQL True PC9_epitope_Rep1 1008.53524305008 1008.53414993586 49.387 2 0.1307644865020704 0.0008860249697946033 0.004707345926252638 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 76708 16093 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53856993586 67.158 2 0.13076228641156248 0.0008860249697946033 0.004707583649325952 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 66159 10189 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.49147496793 44.132 1 0.13075713573979109 0.0008860249697946033 0.004708140233362314 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 74974 19095 NHQDVAGVFAL True PC9_epitope_Rep2 1169.58292151849 1169.58182993586 78.818 2 0.13074718737036145 0.0008860249697946033 0.004709215442359656 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 70875 20624 LYEEAFTVF True PC9_epitope_Rep6 1117.53317736141 1117.53208993586 92.063 2 0.1307415513251474 0.0008860249697946033 0.0047098246873257844 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 102181 16060 SLRTLTNETF True PC9_epitope_Rep5 1180.60880191316 1180.6077099358602 66.764 2 0.13074080576507646 0.0008860249697946033 0.004709905286658377 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 93051 8473 RPNDIM[Oxidation]AEV True PC9_epitope_Rep1 1059.50189469691 1059.5007899358602 37.426 2 0.13073733299011067 0.0008860249697946033 0.004710280731509178 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 76952 14920 NRDTQELLL True PC9_epitope_Rep5 1100.58258716532 1100.5814899358602 62.394 2 0.13073468682025768 0.0008860249697946033 0.004710566831116681 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 11404 10649 DETEFYLGK True NCI_RA007_Epitope_Rep5 1100.50260550912 1100.5015099358602 47.598 2 0.13073241074707392 0.0008860249697946033 0.004710812930160973 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 119235 19949 VALDKVIEI True PC9_epitope_Rep1 998.6011973515799 998.60010993586 81.556 2 0.13072331772857254 0.0008860249697946033 0.004711796233660494 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 104757 17883 SQVPHLPVLV True PC9_epitope_Rep6 1087.6389798426299 1087.6378899358601 81.413 2 0.13072068947450374 0.0008860249697946033 0.004712080486222251 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 77032 21187 NRIQDLLEL True PC9_epitope_Rep5 1112.61897267404 1112.6178699358602 86.543 2 0.13071173597012903 0.0008860249697946033 0.0047130489579341895 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 58550 11042 LEQLFQDEVAK True NCI_RA007_Epitope_Rep1 1318.67688147298 1318.6757899358602 46.947 2 0.13070733637476786 0.0008860249697946033 0.004713524919808225 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 137233 15887 YAYTGVLQL True H1975_Epitope_Rep3 1026.53859709502 1026.53750993586 66.558 2 0.13070319874543498 0.0008860249697946033 0.004713972584575681 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 17604 11173 EHINEGETAML True PC9_epitope_Rep4 1242.55505208814 1242.5539499358601 50.755 2 0.13070161158312701 0.0008860249697946033 0.004714144316395973 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 115570 14160 TRSSLEVEL True PC9_epitope_Rep5 1032.5451390274397 1032.5440499358601 59.477 2 0.13069828226600008 0.0008860249697946033 0.004714504570326866 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'nc|ENSG00000257923|P39880-4|CUX1', 'ENSG00000257923|ENST00000292535|CUX1', 'nc|ENSG00000257923|P39880-2|CUX1', 'nc|ENSG00000257923|P39880-5|CUX1', 'nc|ENSG00000257923|P39880-3|CUX1', 'nc|ENSG00000257923|P39880-6|CUX1'] 76984 13809 NRFPAVNSL True PC9_epitope_Rep2 1016.5403284305199 1016.53922993586 58.4 2 0.13068100331469448 0.0008860249697946033 0.004716374701615407 ['nc|ENSG00000108587|O95249-2|GOSR1', 'ENSG00000108587|ENST00000451249|GOSR1', 'nc|ENSG00000108587|O95249|GOSR1'] 114607 9098 TQDPTVTRL True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 39.935 2 0.13067545126027527 0.0008860249697946033 0.004716975765294686 ['ENSG00000130827|ENST00000369682|PLXNA3'] 12384 9027 DISLSDYK True H1975_Epitope_Rep3 939.45492704071 939.4543749679301 39.717 1 0.13067353326002334 0.0008860249697946033 0.0047171834249336774 ['ENSG00000117450|ENST00000319248|PRDX1'] 54063 16561 KVIEINPYL True PC9_epitope_Rep6 1087.62774645259 1087.62664993586 76.14 2 0.1306732238348912 0.0008860249697946033 0.004717216926873355 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 54962 6309 KYQEVTNNL True NCI_RA007_Epitope_Rep5 1107.5560380643099 1107.5549499358601 30.946 2 0.13066987397100646 0.0008860249697946033 0.004717579636838872 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 71463 16296 LYVGKTSLI True PC9_epitope_Rep1 992.59063266788 992.58952993586 67.502 2 0.13066951948865185 0.0008860249697946033 0.004717618020388103 ['ENSG00000100228|ENST00000263116|RAB36'] 111289 15172 THMAPEVVL True PC9_epitope_Rep3 995.51100244819 995.50990993586 63.502 2 0.13066914033326887 0.0008860249697946033 0.004717659075887138 ['ENSG00000006062|ENST00000344686|MAP3K14', 'ENST00000592267.1_1_17:43342005-43351146:-|nuORF', 'ENST00000586644.1_1_17:43348295-43350966:-|nuORF'] 74725 11999 NHADIVSCV True PC9_epitope_Rep5 956.43856578392 956.43746993586 51.149 2 0.13066761326961815 0.0008860249697946033 0.004717824432133347 ['ENSG00000067167|ENST00000262213|TRAM1', 'ENST00000521049.5_1_8:71510241-71520545:-|nuORF', 'TRAM1L1|p.W135Lfs*9|1|0.14|ENSG00000174599|chr4:117084990-117084991|-/A|frameshift_variant', 'ENSG00000174599|ENST00000310754|TRAM1L1'] 97419 11210 SEEDFLRQV True H1975_Epitope_Rep3 1121.53530261973 1121.5342099358602 48.219 2 0.1306654108692119 0.0008860249697946033 0.004718062926457615 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 140543 4549 YRPGTVALR True NCI_RA007_Epitope_Rep5 1031.5876129761098 1031.58650993586 24.153 2 0.13066176915961336 0.0008860249697946033 0.00471845730725762 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 138405 6605 YHGNTNPEL True PC9_epitope_Rep5 1043.46722305991 1043.4661299358602 30.378 2 0.13066150952183447 0.0008860249697946033 0.0047184854261031394 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 99042 14921 SHFEGLITT True PC9_epitope_Rep5 1003.49746055903 1003.49636993586 62.398 2 0.13065896355498458 0.0008860249697946033 0.004718761163781888 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 1682 6770 AEGDVAALNR True PC9_epitope_Rep3 1014.5094222250599 1014.50832993586 31.062 2 0.13065546295131344 0.0008860249697946033 0.0047191403180867515 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 121961 20470 VFTEVANLF True PC9_epitope_Rep6 1038.53859709502 1038.53750993586 91.455 2 0.1306508586188757 0.0008860249697946033 0.004719639064171048 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 54357 11941 KYEELQIT True PC9_epitope_Rep5 1022.5284263341399 1022.5273299358599 50.928 2 0.13064358977617138 0.0008860249697946033 0.004720426538437883 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 133906 21364 VYIDQTMVL True PC9_epitope_Rep1 1080.5525329069999 1080.5514299358601 87.008 2 0.13063500907472206 0.0008860249697946033 0.004721356300197728 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 114562 19870 TQDAVPLTL True PC9_epitope_Rep2 956.51786165044 956.51731496793 81.824 1 0.1306348281818142 0.0008860249697946033 0.004721375902786484 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 90431 5370 REILVNQTA True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 28.13 2 0.1306324933040391 0.0008860249697946033 0.004721628930672561 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D', 'ENST00000502526.1_1_4:119659352-119659508:-|nuORF'] 134381 19885 VYPEYVIQY True PC9_epitope_Rep4 1172.57537652656 1172.57426993586 84.62 2 0.13063022419493864 0.0008860249697946033 0.004721874844080963 ['ENSG00000059378|ENST00000263549|PARP12'] 92884 17062 RPFQSELFA True PC9_epitope_Rep3 1093.55564414149 1093.5545499358602 70.781 2 0.13062481818291324 0.0008860249697946033 0.004722460768378014 ['ENST00000488504.5_1_22:50695267-50699938:-|nuORF', 'nc|ENSG00000188130|P53778-2|MAPK12', 'ENSG00000188130|ENST00000215659|MAPK12'] 93483 9100 RQIPLQSL True NCI_RA007_Epitope_Rep4 953.56581490237 953.56470993586 41.841 2 0.13062117716447916 0.0008860249697946033 0.004722855436254633 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1', 'ENST00000467423.1_1_1:19566287-19566919:-|nuORF'] 105328 18968 SRPPLLGF True PC9_epitope_Rep3 885.50723739709 885.50614993586 78.184 2 0.13061517740860112 0.0008860249697946033 0.004723505850128432 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 1658 8347 AEFVEVTK True PC9_epitope_Rep2 921.4807478657299 921.47964993586 37.477 2 0.13061130653645053 0.0008860249697946033 0.004723925525502983 ['CON__P02769'] 103579 6716 SPSPPFGHSA True PC9_epitope_Rep4 982.4508447197801 982.44974993586 33.021 2 0.13060189754476648 0.0008860249697946033 0.004724945790339237 ['ENSG00000141232|ENST00000499247|TOB1'] 43030 4963 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 24.173 2 0.13059683114469578 0.0008860249697946033 0.004725495255746429 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 107919 19535 SVVSQFITV True PC9_epitope_Rep6 978.5385970950199 978.53750993586 87.805 2 0.1305964101148893 0.0008860249697946033 0.004725540920450483 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'DAAM1|p.S926C|1|0.5|ENSG00000100592|chr14:59363703-59363703|C/G|missense_variant'] 111547 6801 TIAPALVSK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 32.846 2 0.13059348155642642 0.0008860249697946033 0.004725858562611451 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 120007 6945 [Acetylation]-VDREQLVQK True NCI_RA007_Epitope_Rep2 1155.62478664677 1155.62368993586 31.634 2 0.1305823544371587 0.0008860249697946033 0.004727065642372081 ['ENSG00000170027|ENST00000307630|YWHAG'] 107636 9073 SVQDVIYVR True NCI_RA007_Epitope_Rep3 1077.58185888933 1077.5807699358602 42.778 2 0.13058010917438126 0.0008860249697946033 0.004727309247276122 ['ENSG00000099282|ENST00000373290|TSPAN15'] 61814 18468 LLASEVPQL True PC9_epitope_Rep6 968.5542471591598 968.55314993586 83.678 2 0.13057867395871464 0.0008860249697946033 0.004727464970748412 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2578584-2579570:-|nuORF', 'ENST00000469750.5_1_7:2577705-2579570:-|nuORF'] 84483 14389 QALLDLHAL True NCI_RA007_Epitope_Rep1 992.5654805492001 992.56438993586 60.012 2 0.13057820481965457 0.0008860249697946033 0.004727515874272716 ['ENSG00000087086|ENST00000331825|FTL'] 38314 10706 HEGLPGLAV True H1975_Epitope_Rep2 891.4814165720699 891.48030993586 46.205 2 0.13057442359848906 0.0008860249697946033 0.004727926172081468 ['ENSG00000169710|ENST00000306749|FASN'] 76736 16610 NQVEALNNL True PC9_epitope_Rep1 1013.5141732523299 1013.51306993586 68.717 2 0.13057177551956486 0.0008860249697946033 0.004728213534251269 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 9470 7516 AVVIVDDR True PC9_epitope_Rep2 885.4919812557699 885.49088993586 34.278 2 0.1305685032062105 0.0008860249697946033 0.0047285686603649865 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 3287 5071 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 27.159 2 0.13055447489169766 0.0008860249697946033 0.004730091373600721 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 72358 21306 MISLEIPQV True PC9_epitope_Rep4 1028.55761828744 1028.55652993586 90.121 2 0.13055425911805382 0.0008860249697946033 0.004730114798672205 ['ENSG00000111231|ENST00000228827|GPN3', 'nc|ENSG00000111231|Q9UHW5-2|GPN3', 'nc|ENSG00000111231|Q9UHW5-3|GPN3'] 140940 11566 YSESSQLLY True H1975_Epitope_Rep3 1088.50260550912 1088.50207496793 49.617 1 0.13055253982328174 0.0008860249697946033 0.00473030145484984 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 140340 10463 YRDPGAVDL True PC9_epitope_Rep4 1004.4927095317598 1004.49160993586 47.958 2 0.1305518308182711 0.0008860249697946033 0.004730378430478876 ['ENST00000577240.1_1_17:73264046-73266276:-|nuORF', 'nc|ENSG00000125457|A9UHW6-2|MIF4GD', 'nc|ENSG00000125457|A9UHW6-3|MIF4GD'] 25492 13828 FEFGVDPSA True H1975_Epitope_Rep3 967.4287122928698 967.42816496793 58.495 1 0.1305488299945788 0.0008860249697946033 0.004730704239142089 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 115338 15968 TRIGLINDM True PC9_epitope_Rep2 1031.54336520563 1031.54226993586 66.674 2 0.13054400801959928 0.0008860249697946033 0.004731227822085592 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 109410 7715 TDEKIVLSA True H1975_Epitope_Rep2 974.5284263341399 974.5273299358599 34.628 2 0.13053578357582754 0.0008860249697946033 0.004732120985854624 ['nc|ENSG00000101353|Q9H579-2|MROH8', 'ENSG00000101353|ENST00000343811|MROH8'] 105071 7850 SRDQSTPII True PC9_epitope_Rep4 1015.5298233164699 1015.52872993586 37.609 2 0.13052782686852993 0.0008860249697946033 0.004732985231799258 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 118665 10342 TYSTEPNNL True PC9_epitope_Rep2 1037.46655435357 1037.46544993586 45.106 2 0.1305275303985807 0.0008860249697946033 0.00473301743693601 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 8331 8503 ATIRVLEAIQK True NCI_RA007_Epitope_Rep3 1240.7503211967598 1240.74868490379 40.521 3 0.13052502717936604 0.0008860249697946033 0.004733289366916423 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A'] 76751 13344 NQVVRFETV True PC9_epitope_Rep5 1090.5771078620598 1090.5760099358602 56.342 2 0.13052331723096536 0.0008860249697946033 0.004733475131059334 ['nc|ENSG00000011566|Q8IVH8-3|MAP4K3', 'nc|ENSG00000011566|Q8IVH8-2|MAP4K3', 'ENSG00000011566|ENST00000263881|MAP4K3'] 3937 13918 AHDDSVMYL True PC9_epitope_Rep4 1049.44879611445 1049.4476899358601 61.438 2 0.1305213808051477 0.0008860249697946033 0.004733685507760517 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 52845 10577 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54290993586 48.423 2 0.13051495858885515 0.0008860249697946033 0.004734383294517519 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 77674 15523 NTIDRLIQA True PC9_epitope_Rep1 1042.57710786206 1042.5760099358602 64.532 2 0.13051483430050492 0.0008860249697946033 0.004734396799696471 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 89005 9546 QVISQAAVVHA True PC9_epitope_Rep4 1121.61930702721 1121.61820993586 44.332 2 0.1305117473354493 0.0008860249697946033 0.004734732241659957 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 90436 8235 REIQEAIAV True H1975_Epitope_Rep2 1027.5662088251897 1027.5651099358602 36.627 2 0.1305088798456971 0.0008860249697946033 0.004735043855524579 ['ENSG00000198218|ENST00000395443|QRICH1'] 111662 8379 TIEIITDR True NCI_RA007_Epitope_Rep4 959.52876068731 959.52766993586 39.043 2 0.1305075919765736 0.0008860249697946033 0.00473518381651925 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77493 15646 NTDDWENFAY True H1975_Epitope_Rep2 1273.48874635013 1273.4876499358602 65.338 2 0.1304967346138083 0.0008860249697946033 0.0047363639176800885 ['ENSG00000143669|ENST00000389793|LYST'] 118300 19472 TYLPTSPLL True PC9_epitope_Rep6 1003.55899818643 1003.55847496793 87.563 1 0.13049641148009958 0.0008860249697946033 0.004736399043948647 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 77038 10187 NRITDASAL True PC9_epitope_Rep1 959.5036085686299 959.50250993586 44.063 2 0.13049367732859196 0.0008860249697946033 0.0047366962703143025 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 138556 13268 YIDAQFEAY True H1975_Epitope_Rep1 1118.49204082542 1118.49147496793 56.134 1 0.13049168602446484 0.0008860249697946033 0.004736912754181228 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10'] 58197 9434 LELDKPIAA True H1975_Epitope_Rep2 968.5542471591599 968.55314993586 41.255 2 0.13049094588948174 0.0008860249697946033 0.004736993220156312 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000491251.1_1_22:30418516-30421787:+|nuORF'] 88590 13153 QTDPTLLSV True H1975_Epitope_Rep2 972.5127762699999 972.51222496793 55.715 1 0.13046962131591616 0.0008860249697946033 0.004739312162648792 ['ENSG00000144867|ENST00000678299|SRPRB'] 54765 17024 KYNANFVTF True PC9_epitope_Rep2 1102.54474510462 1102.54364993586 70.734 2 0.1304694007724732 0.0008860249697946033 0.004739336151502268 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 2499 4361 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 21.888 2 0.13046581755891395 0.0008860249697946033 0.004739725919967967 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 104044 2549 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 14.72 2 0.13046291913451646 0.0008860249697946033 0.004740041222739673 ['ENSG00000130935|ENST00000253247|NOL11'] 3933 14515 AHDDSVMYL True PC9_epitope_Rep2 1049.44879611445 1049.4476899358601 61.102 2 0.130461855958662 0.0008860249697946033 0.004740156884648648 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 89729 7792 RADESTYVL True NCI_RA007_Epitope_Rep3 1052.51383889916 1052.51274993586 37.775 2 0.1304560287449136 0.0008860249697946033 0.004740790871149536 ['ENSG00000115267|ENST00000649979|IFIH1'] 134092 11855 VYKTIMEQF True NCI_RA007_Epitope_Rep4 1157.57908200801 1157.5779899358602 52.58 2 0.13045432131812876 0.0008860249697946033 0.004740976650792377 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 68158 8259 LTDRELEEY True H1975_Epitope_Rep1 1166.54553295026 1166.5449749679299 36.707 1 0.1304542262813256 0.0008860249697946033 0.004740986991653294 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 73330 9645 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4690749679298 42.028 1 0.13045372404936023 0.0008860249697946033 0.0047410416393874255 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 95862 18390 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.62577490379 75.756 3 0.1304372780781679 0.0008860249697946033 0.004742831464095224 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 28167 9549 FRDQNPEQL True PC9_epitope_Rep3 1145.5465360097699 1145.54542993586 41.679 2 0.1304328726977375 0.0008860249697946033 0.0047433110171963 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 67417 7340 LSSPATLNSR True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 33.193 2 0.13042525456696502 0.0008860249697946033 0.004744140410846292 ['CON__P00761'] 104304 18026 SQINKFLYL True PC9_epitope_Rep6 1124.62299542532 1124.62188993586 81.964 2 0.13042140346601855 0.0008860249697946033 0.004744559738458771 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 68618 22929 LTIDDGIFEV True PC9_epitope_Rep1 1120.56520576568 1120.5641099358602 92.997 2 0.13041815599199802 0.0008860249697946033 0.0047449133684374515 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 42455 8027 IEEAMDGSETP True H1975_Epitope_Rep2 1177.48088408837 1177.47978993586 35.823 2 0.1304124415147567 0.0008860249697946033 0.004745535702927725 ['ENSG00000087365|ENST00000322535|SF3B2'] 111829 21006 TILRLLQQV True PC9_epitope_Rep1 1082.68117900778 1082.68008993586 85.627 2 0.13040306593623396 0.0008860249697946033 0.004746556923325981 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 3993 13284 AHDVDPIEL True PC9_epitope_Rep6 1007.4923751785899 1007.49126993586 62.749 2 0.13039984727093662 0.0008860249697946033 0.004746907561356 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 114664 18137 TQESVFATV True PC9_epitope_Rep5 980.4814761417199 980.48036993586 74.774 2 0.13039836875694252 0.0008860249697946033 0.004747068637671414 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-4|KIF15'] 103718 5994 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 28.444 2 0.13038865291312635 0.0008860249697946033 0.0047481272615817515 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 40039 10163 HPTEDLVVSA True PC9_epitope_Rep2 1066.5294889632999 1066.52838993586 44.429 2 0.13038321179592516 0.0008860249697946033 0.004748720219157988 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 115602 13759 TRTSQVLVI True PC9_epitope_Rep1 1015.6025943339098 1015.60148993586 57.769 2 0.1303823767404659 0.0008860249697946033 0.004748811227594883 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'ENST00000521468.1_1_8:124195447-124212099:+|nuORF'] 130151 9843 VSDTVVEPY True H1975_Epitope_Rep3 1007.4811417885498 1007.48004993586 42.89 2 0.13038003340568796 0.0008860249697946033 0.00474906662487536 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 139921 7798 YQAEAREAL True PC9_epitope_Rep5 1049.5141732523298 1049.5130699358601 34.939 2 0.13037922046446931 0.0008860249697946033 0.00474915522953484 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 23826 18087 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.66355490379 74.874 3 0.1303772800668946 0.0008860249697946033 0.004749366725286979 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 35378 6435 GSDCTTIHY True H1975_Epitope_Rep2 995.4018459220301 995.40074993586 29.672 2 0.13037443275171465 0.0008860249697946033 0.00474967708830062 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.Y236C|2|0.45|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 134137 20109 VYLDKFIRL True PC9_epitope_Rep3 1165.68593003505 1165.68427490379 82.601 3 0.13037402885506505 0.0008860249697946033 0.004749721115455279 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 78311 9424 NYIPVKNGKQF True PC9_epitope_Rep1 1306.70337100434 1306.70173490379 41.108 3 0.13037213045982463 0.0008860249697946033 0.004749928057292843 ['ENSG00000095951|ENST00000379388|HIVEP1'] 139557 19827 YLTVAAVFR True PC9_epitope_Rep1 1038.5862159937797 1038.5851099358601 81.078 2 0.1303715121021045 0.0008860249697946033 0.004749995465658923 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 759 10196 AAVPRAAFL True H1975_Epitope_Rep2 914.5337864980999 914.53268993586 44.223 2 0.1303701398923211 0.0008860249697946033 0.004750145056254416 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 135415 17019 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.55560993586 70.618 2 0.1303683206301151 0.0008860249697946033 0.004750343389142427 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 26218 13406 FHDMGGVQL True PC9_epitope_Rep6 1002.4593012284997 1002.4582099358599 63.241 2 0.1303675619535573 0.0008860249697946033 0.004750426101186171 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 112994 7560 TLLVADPR True NCI_RA007_Epitope_Rep5 883.51271670035 883.51160993586 35.765 2 0.13036649143985715 0.0008860249697946033 0.004750542812589587 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000339471.8_1_19:39923915-39924228:-|nuORF', 'ENST00000602153.5_1_19:39923915-39924074:-|nuORF', 'ENST00000599705.1_1_19:39923915-39924331:-|nuORF', 'RPS16|p.D116Y|1|0.36|ENSG00000105193|chr19:39433368-39433368|C/A|missense_variant', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 108194 17525 SYGKINILL True PC9_epitope_Rep6 1019.60153170475 1019.60042993586 80.043 2 0.13036386459603108 0.0008860249697946033 0.0047508292128812584 ['ENSG00000112249|ENST00000369162|ASCC3'] 100496 22303 SLAQYLINV True PC9_epitope_Rep3 1019.5651461960299 1019.56404993586 91.073 2 0.13036365768891237 0.0008860249697946033 0.004750851772332908 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 2180 11235 AELWGEQAEA True H1975_Epitope_Rep1 1102.49310345458 1102.49200993586 48.189 2 0.13036144143757056 0.0008860249697946033 0.004751093420778881 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 6113 14540 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 60.752 2 0.13035723236381855 0.0008860249697946033 0.004751552389464726 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 138036 6513 YGAATFTRTG True NCI_RA007_Epitope_Rep5 1043.50360856863 1043.5025099358602 31.718 2 0.13035310455985266 0.0008860249697946033 0.004752002538670278 ['ENSG00000175899|ENST00000318602|A2M'] 1877 9758 AEIEETLQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48584993586 42.464 2 0.13034793725229504 0.0008860249697946033 0.004752566107987649 ['ENSG00000176903|ENST00000316836|PNMA1'] 93629 8887 RQQITTVVL True NCI_RA007_Epitope_Rep3 1056.62914343492 1056.6280499358602 42.045 2 0.13034209635809185 0.0008860249697946033 0.004753203220858614 ['ENSG00000166002|ENST00000298966|SMCO4'] 35142 9050 GQWKKGFVL True NCI_RA007_Epitope_Rep1 1061.6022004110898 1061.6011099358602 39.205 2 0.13033871851984888 0.0008860249697946033 0.004753571706964326 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 24145 10342 EYQDLLNVK True H1975_Epitope_Rep3 1120.5764391557198 1120.57534993586 44.833 2 0.13033853138420112 0.0008860249697946033 0.00475359212228866 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 124738 17639 VHAPPMQLGF True PC9_epitope_Rep4 1095.5535359665098 1095.5524299358601 75.87 2 0.1303377854899064 0.0008860249697946033 0.00475367349553122 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 23942 19231 EYLLKVNEI True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 78.772 2 0.13033682818451287 0.0008860249697946033 0.004753777934650034 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 38217 7134 HEAIETDIAA True H1975_Epitope_Rep1 1068.50875351872 1068.5076499358602 32.465 2 0.1303330374738585 0.0008860249697946033 0.0047541915118838474 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 2183 11488 AELWGEQAEA True H1975_Epitope_Rep2 1102.49310345458 1102.4925749679298 49.244 1 0.13032454134976756 0.0008860249697946033 0.00475511859168225 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 42419 6781 IEDLSQQA True H1975_Epitope_Rep3 902.4345259493001 902.43397496793 31.037 1 0.13032067338242428 0.0008860249697946033 0.004755540715375885 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA'] 2896 7571 AEVVNGYEA True H1975_Epitope_Rep3 950.4345259492998 950.43397496793 34.103 1 0.130310495390619 0.0008860249697946033 0.00475665164856175 ['ENSG00000076513|ENST00000261739|ANKRD13A'] 21798 9440 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 41.168 2 0.13030786350017992 0.0008860249697946033 0.0047569389623681275 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 50060 7083 KKFLKPYTL True NCI_RA007_Epitope_Rep4 1136.69576644276 1136.69466993586 33.868 2 0.1303075995691158 0.0008860249697946033 0.004756967775694946 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 18469 20292 EKDPSYFVF True PC9_epitope_Rep5 1130.5284263341398 1130.52732993586 83.102 2 0.1303062502788479 0.0008860249697946033 0.004757115080257606 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 3897 17921 AHAYPAQWTL True PC9_epitope_Rep5 1156.5665431783598 1156.5654499358602 73.951 2 0.13030610109060428 0.0008860249697946033 0.004757131367695167 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-13|MUC4', 'nc|ENSG00000145113|Q99102-12|MUC4'] 71526 20983 MAAAWPLLL True H1975_Epitope_Rep2 984.5466596809199 984.5461149679301 86.86 1 0.13030598721602343 0.0008860249697946033 0.004757143799845261 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 8936 11352 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6965849037902 54.708 3 0.13030230883500382 0.0008860249697946033 0.004757545400832371 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 76777 18395 NRAATLMML True PC9_epitope_Rep1 1019.5256069665099 1019.52450993586 75.546 2 0.13029676505888363 0.0008860249697946033 0.004758150726356424 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 129281 20127 VQVPVPVTV True PC9_epitope_Rep1 936.5644179200399 936.56332993586 82.248 2 0.1302958558211096 0.0008860249697946033 0.004758250013366325 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 110102 3571 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 18.637 2 0.13029573431770217 0.0008860249697946033 0.004758263281458384 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 134211 16984 VYMDWYEK True PC9_epitope_Rep5 1132.4899326504399 1132.4888299358602 70.347 2 0.1302924999042822 0.0008860249697946033 0.004758616490663365 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 48205 21120 IYPTTYVQF True PC9_epitope_Rep5 1130.56481184286 1130.56370993586 86.298 2 0.1302796222182013 0.0008860249697946033 0.004760023034798999 ['ENSG00000179820|ENST00000391770|MYADM'] 40355 4582 HQRITEEL True NCI_RA007_Epitope_Rep5 1024.53015766964 1024.5290699358602 24.286 2 0.1302742515498666 0.0008860249697946033 0.004760609758170185 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 26946 6743 FLDSRHLDHY True H1975_Epitope_Rep1 1301.6152842759302 1301.61364490379 30.979 3 0.13027226034144349 0.0008860249697946033 0.0047608273075712085 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6', 'nc|ENSG00000116675|O75061-3|DNAJC6'] 9529 14946 AVYDFFIGR True NCI_RA007_Epitope_Rep4 1086.5498304850598 1086.5487299358601 64.955 2 0.13026959354889528 0.0008860249697946033 0.004761118683221501 ['ENSG00000143815|ENST00000272163|LBR'] 49949 16107 KILQELPSV True PC9_epitope_Rep4 1025.6120963884498 1025.61098993586 69.893 2 0.13026659774916907 0.0008860249697946033 0.00476144602736824 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 128207 13627 VPMTPLRTV True PC9_epitope_Rep5 1012.5739370579199 1012.57282993586 57.439 2 0.13024706914125503 0.0008860249697946033 0.004763580416463935 ['ENSG00000107949|ENST00000278100|BCCIP'] 26395 16402 FHYEADGANVL True PC9_epitope_Rep1 1234.5618517207397 1234.56074993586 67.914 2 0.13024654962335705 0.0008860249697946033 0.004763637210295639 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 35729 7377 GTGIVSAPVPK True NCI_RA007_Epitope_Rep1 1024.59169529704 1024.5905899358602 32.689 2 0.13024249048043202 0.0008860249697946033 0.004764080979807167 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 139350 21421 YLLPAIVHI True PC9_epitope_Rep3 1037.62735252977 1037.6262499358602 87.688 2 0.13024127305625288 0.0008860249697946033 0.004764214083751821 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 108244 23028 SYIDVLPEF True PC9_epitope_Rep5 1081.53317736141 1081.53208993586 93.569 2 0.1302389912433402 0.0008860249697946033 0.00476446356976512 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 79808 5631 PEEVSVTVK True NCI_RA007_Epitope_Rep4 986.5284263341399 986.5273299358599 28.261 2 0.13022834293409025 0.0008860249697946033 0.004765627991377468 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 85709 9382 QHADPPVQI True PC9_epitope_Rep2 1003.50869394907 1003.50758993586 41.425 2 0.13022822867940326 0.0008860249697946033 0.004765640486957587 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 12015 12959 DHSGQVTIL True PC9_epitope_Rep1 968.49270953176 968.49160993586 54.719 2 0.13022780707281273 0.0008860249697946033 0.0047656865966705445 ['ENSG00000139668|ENST00000298125|WDFY2'] 21723 12388 ERSPVIQTL True PC9_epitope_Rep5 1041.58185888933 1041.5807699358602 52.647 2 0.1302268460684769 0.0008860249697946033 0.0047657917001654075 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 75680 23574 NLIDLDDLYV True PC9_epitope_Rep1 1191.6023195503901 1191.6012299358601 95.465 2 0.13022460654880552 0.0008860249697946033 0.004766036641676268 ['ENSG00000125676|ENST00000245838|THOC2'] 5131 19322 ALLPELREV True PC9_epitope_Rep2 1038.6073453611798 1038.6062499358602 79.696 2 0.13022256174052843 0.0008860249697946033 0.004766260297969394 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 110372 7737 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 34.744 2 0.13021494026222682 0.0008860249697946033 0.004767094008266271 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 31989 5665 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 26.788 2 0.13021065470594378 0.0008860249697946033 0.00476756286651569 ['ENSG00000108344|ENST00000264639|PSMD3'] 3946 10941 AHDGGIYAL True PC9_epitope_Rep4 915.44503106335 915.44392993586 49.854 2 0.1302098842150714 0.0008860249697946033 0.004767647166338033 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 37854 20354 GYMEGYYTF True PC9_epitope_Rep4 1129.44264810485 1129.4415499358602 86.434 2 0.1302091447689445 0.0008860249697946033 0.004767728070917875 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 9425 4548 AVTTVVNPK True NCI_RA007_Epitope_Rep4 927.5389314481899 927.53782993586 23.897 2 0.13020829848368523 0.0008860249697946033 0.0047678206666827445 ['ENSG00000150093|ENST00000302278|ITGB1'] 10057 12030 AYSRVQYQF True PC9_epitope_Rep4 1160.5614577979202 1160.56036993586 54.076 2 0.1302067912050706 0.0008860249697946033 0.004767985589000698 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 104921 17638 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.4909699358602 72.856 2 0.13020617015920843 0.0008860249697946033 0.004768053543779921 ['ENSG00000113387|ENST00000265073|SUB1'] 118674 15640 TYTDRVFFL True NCI_RA007_Epitope_Rep2 1160.5866099165999 1160.58550993586 65.549 2 0.13020576981049578 0.0008860249697946033 0.0047680973504034135 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 104043 4826 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 23.658 2 0.1302034867027862 0.0008860249697946033 0.004768347178286602 ['ENSG00000130935|ENST00000253247|NOL11'] 114665 22195 TQFADMISL True PC9_epitope_Rep1 1024.4899326504399 1024.4888299358602 90.193 2 0.13019873008212046 0.0008860249697946033 0.004768867710438244 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 73587 8599 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep2 1074.57433136118 1074.5732299358601 38.437 2 0.13019791420690893 0.0008860249697946033 0.004768956999881555 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 97399 7199 SEDVAKIVA True H1975_Epitope_Rep3 930.5022115862998 930.50110993586 32.666 2 0.13019712319940752 0.0008860249697946033 0.004769043569372089 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF', 'ENST00000477693.1_1_2:122488402-122494426:-|nuORF', 'ENSG00000155438|ENST00000285814|NIFK'] 6379 5713 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 26.97 2 0.1301939435552823 0.0008860249697946033 0.00476939157178314 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 105472 9955 SRVTNNVVL True PC9_epitope_Rep5 1000.56654317836 1000.56544993586 43.267 2 0.1301863865530089 0.0008860249697946033 0.0047702187630852535 ['ENSG00000104147|ENST00000220514|OIP5'] 68617 22928 LTIDDGIFEV True PC9_epitope_Rep1 1120.56520576568 1120.56467496793 92.993 1 0.1301672713255939 0.0008860249697946033 0.004772311750980502 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 44056 12962 IILDEAHNV True PC9_epitope_Rep5 1022.53965972418 1022.53856993586 54.867 2 0.13016690527670388 0.0008860249697946033 0.004772351839673843 ['ENSG00000116830|ENST00000369466|TTF2'] 124933 15174 VHSEQVFAL True PC9_epitope_Rep2 1028.5290950404797 1028.5279899358602 63.623 2 0.13016091524871456 0.0008860249697946033 0.00477300789858271 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 17609 10499 EHINEGETAML True PC9_epitope_Rep6 1242.55505208814 1242.5539499358601 51.163 2 0.13015419261898817 0.0008860249697946033 0.004773744301561409 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 38893 10533 HHFEGAQIL True PC9_epitope_Rep2 1050.5246783663797 1050.5235899358602 45.836 2 0.13014182491773468 0.0008860249697946033 0.004775099362963428 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 60885 13535 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 56.919 2 0.1301414137163076 0.0008860249697946033 0.004775144422558399 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 130092 13873 VSDMVEDLY True H1975_Epitope_Rep2 1069.4637774722498 1069.46268993586 58.507 2 0.13013682573771895 0.0008860249697946033 0.004775647203231472 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 133850 19332 VYGNERFIQYL True PC9_epitope_Rep4 1400.7088503075997 1400.7077499358602 82.468 2 0.1301291807856216 0.0008860249697946033 0.0047764851027981585 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 84197 17233 PYLDKFFTL True NCI_RA007_Epitope_Rep5 1142.6011973515801 1142.60010993586 73.06 2 0.1301285281923298 0.0008860249697946033 0.00477655663482034 ['ENSG00000130158|ENST00000294618|DOCK6'] 99103 8750 SHHENLVSF True PC9_epitope_Rep4 1068.49885754136 1068.49776993586 41.163 2 0.13012733829547538 0.0008860249697946033 0.004776687064447073 ['ENSG00000128791|ENST00000262120|TWSG1'] 4627 8109 ALAAGGYDVEK True PC9_epitope_Rep4 1092.54513902744 1092.5440499358601 38.645 2 0.13012632192128654 0.0008860249697946033 0.004776798476296728 ['ENSG00000184357|ENST00000331442|H1-5'] 107208 12612 SVIPQIQKV True PC9_epitope_Rep6 1010.6124307416198 1010.61132993586 59.971 2 0.13012313061777853 0.0008860249697946033 0.004777148313913471 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 97962 10467 SENPSVYVP True NCI_RA007_Epitope_Rep4 990.4658260775799 990.46472993586 47.111 2 0.1301207943063813 0.0008860249697946033 0.0047774044414291795 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 5064 20252 ALLDRIVSV True PC9_epitope_Rep1 984.59678067748 984.59568993586 82.728 2 0.13012026050425002 0.0008860249697946033 0.00477746296352771 ['ENSG00000155561|ENST00000285968|NUP205'] 92110 8011 RLASTLVHL True NCI_RA007_Epitope_Rep3 1008.6080140675199 1008.60690993586 38.605 2 0.13011851608205166 0.0008860249697946033 0.004777654213934264 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 44685 15941 ILTERGYSF True PC9_epitope_Rep3 1084.55530978832 1084.5542099358602 66.463 2 0.13011846264205826 0.0008860249697946033 0.004777660072967705 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 61934 10561 LLDIRSEY True H1975_Epitope_Rep1 1007.5287606873101 1007.52766993586 45.575 2 0.13011844406898496 0.0008860249697946033 0.004777662109276822 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 21759 13281 ERTSFNYAM True PC9_epitope_Rep3 1117.4862442523297 1117.4851499358601 56.119 2 0.1301037600349834 0.0008860249697946033 0.004779272300423729 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 28492 10984 FSDVNMQEY True H1975_Epitope_Rep1 1131.4542754177098 1131.4531699358602 47.216 2 0.13009810869171615 0.0008860249697946033 0.004779892145968155 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 97382 12123 SEDPTVPLP True H1975_Epitope_Rep2 953.4705771048499 953.46948993586 51.715 2 0.13009309819719417 0.0008860249697946033 0.004780441768696454 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 95198 14357 RVIGTLEEV True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 60.226 2 0.13009221711116986 0.0008860249697946033 0.004780538425249225 ['ENSG00000100401|ENST00000356244|RANGAP1'] 30242 20096 FYVGHIDAF True PC9_epitope_Rep1 1067.50763131991 1067.50652993586 82.127 2 0.1300920660356442 0.0008860249697946033 0.004780554998670366 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 96357 14417 RYTFGAALF True NCI_RA007_Epitope_Rep4 1044.5392658013598 1044.5381699358602 62.776 2 0.13009032071980142 0.0008860249697946033 0.004780746468955823 ['nc|ENSG00000066405|P56856-2|CLDN18', 'ENSG00000066405|ENST00000183605|CLDN18'] 45614 9420 IRAPSGTSL True PC9_epitope_Rep1 900.50288029264 900.50178993586 41.093 2 0.13007960153419057 0.0008860249697946033 0.0047819225852937285 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 61219 14997 LILSPTREL True PC9_epitope_Rep4 1040.62299542532 1040.62188993586 65.625 2 0.13007740452881073 0.0008860249697946033 0.004782163677384569 ['ENSG00000088205|ENST00000263239|DDX18', 'DDX18|p.M265I|1|0.18|ENSG00000088205|chr2:117821905-117821905|G/T|missense_variant', 'ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54'] 93064 13800 RPNDIMAEV True PC9_epitope_Rep1 1043.50697969691 1043.50588993586 57.927 2 0.1300691666355245 0.0008860249697946033 0.00478306778304163 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 36811 23252 GVLENIFGV True PC9_epitope_Rep2 946.5123823471798 946.51128993586 94.922 2 0.13006808949511336 0.0008860249697946033 0.004783186011229299 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 10172 18524 AYVPGFAHI True PC9_epitope_Rep3 973.5021520166499 973.50104993586 76.47 2 0.13006787029907102 0.0008860249697946033 0.004783210070794772 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF'] 103412 7954 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 35.958 2 0.13006286928492353 0.0008860249697946033 0.004783759028339375 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 1421 8477 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49109496793 37.559 1 0.13006227752021676 0.0008860249697946033 0.004783823990007148 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 118145 19737 TYIPGTQITF True PC9_epitope_Rep6 1139.58627556343 1139.5851699358602 88.575 2 0.1300620935098175 0.0008860249697946033 0.004783844190142464 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 103880 9822 SPYSGPKFNSA True PC9_epitope_Rep5 1153.54038800017 1153.53928993586 42.747 2 0.13005504985874233 0.0008860249697946033 0.004784617485130274 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 17355 21388 EHDDFFISL True PC9_epitope_Rep2 1121.50293986229 1121.50184993586 87.74 2 0.13004741791883478 0.0008860249697946033 0.00478545550493639 ['ENSG00000125676|ENST00000245838|THOC2'] 49003 11981 KEFPGFLEN True NCI_RA007_Epitope_Rep1 1079.5287606873098 1079.52766993586 50.59 2 0.13004500949380568 0.0008860249697946033 0.004785719990344761 ['ENSG00000197747|ENST00000368811|S100A10'] 26354 8479 FHSGDDSQVL True PC9_epitope_Rep4 1103.48835242731 1103.48724993586 40.085 2 0.1300430803819304 0.0008860249697946033 0.004785931849518292 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 115407 19393 TRLPEFSEL True PC9_epitope_Rep1 1090.56587447202 1090.56476993586 79.406 2 0.13004067627396337 0.0008860249697946033 0.004786195886694748 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 8774 19130 AVDLTLPKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 78.376 2 0.13003603757059817 0.0008860249697946033 0.004786705384427745 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 115477 13314 TRNDYVMMY True PC9_epitope_Rep6 1191.50526544475 1191.50416993586 62.869 2 0.13003095441873966 0.0008860249697946033 0.004787263760013423 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 72288 9603 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep2 983.4269984211501 983.42590993586 41.913 2 0.13002994056350217 0.0008860249697946033 0.004787375137955376 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 7544 13234 ASEDSVLLY True H1975_Epitope_Rep2 995.4811417885501 995.48004993586 56.034 2 0.13002202616588227 0.0008860249697946033 0.004788244668605104 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 115163 8611 TRDPAQRVVL True PC9_epitope_Rep5 1153.6567551650899 1153.65511490379 38.066 3 0.13001808234390042 0.0008860249697946033 0.004788678022287563 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 97991 4002 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 20.52 2 0.1300168098413516 0.0008860249697946033 0.0047888178552093754 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 7898 6908 ATAIGMPVEK True NCI_RA007_Epitope_Rep5 1015.5372171960299 1015.5361099358599 33.258 2 0.1300145101344986 0.0008860249697946033 0.004789070575883158 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 31690 5646 GEFTSARAV True NCI_RA007_Epitope_Rep5 936.4664947839199 936.46538993586 28.405 2 0.13001093023594726 0.0008860249697946033 0.00478946400622254 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 7897 7178 ATAIGMPVEK True NCI_RA007_Epitope_Rep4 1015.5372171960299 1015.5361099358599 34.233 2 0.13000797835415784 0.0008860249697946033 0.0047897884415399545 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 2463 15956 AEQLMTLISA True H1975_Epitope_Rep3 1075.55834656343 1075.55724993586 66.829 2 0.1300016207400646 0.0008860249697946033 0.004790487267425813 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 77017 10482 NRIANQVAI True PC9_epitope_Rep1 997.5668775315298 997.56578993586 45.207 2 0.13000023812871672 0.0008860249697946033 0.004790639256685299 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 63537 13845 LMAEMGVHSV True PC9_epitope_Rep5 1072.50453716876 1072.5034299358601 58.275 2 0.12999835032466456 0.0008860249697946033 0.004790846789002602 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000358711.7_1_20:62571331-62572425:-|nuORF'] 36264 9683 GVDVTGPHLY True H1975_Epitope_Rep1 1056.52400966004 1056.52290993586 42.17 2 0.1299922135302308 0.0008860249697946033 0.0047915214875161845 ['ENSG00000136930|ENST00000259457|PSMB7'] 31773 7474 GEIASFDKA True NCI_RA007_Epitope_Rep1 936.4552613938799 936.45416993586 33.064 2 0.12999130114257795 0.0008860249697946033 0.004791621806274596 ['ENSG00000034510|ENST00000233143|TMSB10'] 27919 8343 FQEENTEKL True PC9_epitope_Rep1 1136.5349682665599 1136.5338699358601 36.925 2 0.12997998947942874 0.0008860249697946033 0.004792865716863749 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 127034 14181 VLSIGDGIAR True PC9_epitope_Rep3 999.5712942056299 999.57018993586 59.633 2 0.129976688971975 0.0008860249697946033 0.004793228723931304 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 75811 20959 NLNPEFISV True PC9_epitope_Rep5 1031.5287606873098 1031.52766993586 85.679 2 0.12997453012735108 0.0008860249697946033 0.0047934661795899025 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 43675 12253 IHDGM[Oxidation]NLEL True PC9_epitope_Rep1 1056.49099566004 1056.4898899358602 51.991 2 0.12997320854203123 0.0008860249697946033 0.004793611549128387 ['ENSG00000198258|ENST00000586895|UBL5'] 85352 9207 QETLTNISA True H1975_Epitope_Rep3 975.48728979815 975.48674496793 40.408 1 0.12997309050591588 0.0008860249697946033 0.004793624532879273 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 21381 6603 ERIDTRNEL True PC9_epitope_Rep1 1144.58364979448 1144.5820049037902 30.201 3 0.1299728513144592 0.0008860249697946033 0.004793650843596175 ['ENSG00000044574|ENST00000324460|HSPA5'] 77786 20259 NTTDIFQTV True PC9_epitope_Rep3 1037.50293986229 1037.50184993586 83.186 2 0.12996524551429528 0.0008860249697946033 0.004794487544817262 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 97559 6912 SEESPQVVEA True H1975_Epitope_Rep2 1073.48768372097 1073.4865899358601 31.507 2 0.12996345605715431 0.0008860249697946033 0.0047946844208591214 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 476 16956 AAMEDLTRL True PC9_epitope_Rep5 1018.5117307241799 1018.51062993586 70.239 2 0.12995855967133654 0.0008860249697946033 0.004795223161810073 ['ENSG00000104408|ENST00000220849|EIF3E', 'EIF3E|p.E194D|1|0.39|ENSG00000104408|chr8:108229085-108229085|C/A|missense_variant', 'EIF3E|p.D183G|1|0.17|ENSG00000104408|chr8:108229119-108229119|T/C|missense_variant', 'ENST00000523646.1_1_8:109240494-109241379:-|nuORF'] 48228 18563 IYQDVTLKW True PC9_epitope_Rep4 1164.6179100448799 1164.6168099358601 79.48 2 0.12995415562605486 0.0008860249697946033 0.004795707782268201 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9', 'nc|ENSG00000122507|Q3SYG4-5|BBS9'] 89529 15102 QYLNKNALTTL True PC9_epitope_Rep4 1277.6979512707298 1277.6968499358602 66.019 2 0.12994950904987163 0.0008860249697946033 0.004796219143048349 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF'] 76059 16008 NM[Oxidation]DTFSNLLY True H1975_Epitope_Rep2 1232.53833977528 1232.53724993586 66.773 2 0.12994571298293547 0.0008860249697946033 0.004796636944187094 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 39150 6997 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.5406899358602 34.16 2 0.12994305909401102 0.0008860249697946033 0.004796929056679862 ['ENSG00000156482|ENST00000287038|RPL30'] 137900 12048 YEWVNPAA True H1975_Epitope_Rep3 948.4341320264798 948.4335849679301 51.504 1 0.1299372774735651 0.0008860249697946033 0.004797565497951932 ['ENSG00000092148|ENST00000399332|HECTD1'] 106967 10984 SVEERITQV True PC9_epitope_Rep5 1059.5560380643099 1059.5549499358601 47.239 2 0.12993065976280385 0.0008860249697946033 0.004798294078121327 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'CHD3|p.A1188S|1|0.15|ENSG00000170004|chr17:7903338-7903338|G/T|missense_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 115253 12841 TREEGTPLTL True PC9_epitope_Rep3 1115.5822528121498 1115.5811499358601 54.413 2 0.1299241810134964 0.0008860249697946033 0.004799007464751068 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 139965 20460 YQDEVFGGF True PC9_epitope_Rep4 1060.4501760134397 1060.44967496793 86.844 1 0.12991945357211881 0.0008860249697946033 0.004799528077617593 ['ENSG00000145907|ENST00000356245|G3BP1'] 74525 21867 NFLPPIIARF True PC9_epitope_Rep2 1186.6862643882198 1186.6851699358601 89.587 2 0.12991820423759354 0.0008860249697946033 0.004799665670762301 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 26563 12706 FIIYDTHSL True NCI_RA007_Epitope_Rep5 1107.56006081559 1107.5589699358602 55.537 2 0.12991138169422448 0.0008860249697946033 0.004800417127433456 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 133829 20044 VYGFLRNGF True PC9_epitope_Rep1 1071.5501648382299 1071.5490699358602 81.925 2 0.12990832350974812 0.0008860249697946033 0.004800754003201559 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 75229 14798 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.4888299358602 62.078 2 0.12989705953720942 0.0008860249697946033 0.004801994992143469 ['ENSG00000116285|ENST00000377482|ERRFI1'] 48673 20449 KAVELLVEL True PC9_epitope_Rep5 1012.6168474157198 1012.61574993586 83.693 2 0.12989412964525252 0.0008860249697946033 0.004802317839725273 ['ENSG00000100554|ENST00000216442|ATP6V1D'] 72949 12971 MQDDNQVMV True PC9_epitope_Rep1 1078.44233083502 1078.44122993586 54.764 2 0.12989166502073796 0.0008860249697946033 0.004802589435587947 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 85167 5371 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47634993586 25.699 2 0.12989153701043707 0.0008860249697946033 0.004802603542436962 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 135114 9611 WEEETVPTT True H1975_Epitope_Rep3 1090.4818700645399 1090.48076993586 41.982 2 0.1298876202734577 0.0008860249697946033 0.004803035190049224 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 105029 15770 SRDMTMFVT True PC9_epitope_Rep1 1086.48380172418 1086.4827099358602 65.482 2 0.1298748733242296 0.0008860249697946033 0.004804440243697079 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 103802 12539 SPVYVGRVV True PC9_epitope_Rep3 974.5549158654999 974.55380993586 53.254 2 0.1298718447953241 0.0008860249697946033 0.0048047741277920325 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 34123 21331 GMPDFLEKL True PC9_epitope_Rep1 1048.52631815916 1048.5252299358601 86.88 2 0.12987046508349925 0.0008860249697946033 0.004804926243481876 ['ENSG00000084090|ENST00000337288|STARD7'] 106155 4490 STDPAAPNLK True NCI_RA007_Epitope_Rep3 1012.5189242796 1012.51782993586 24.49 2 0.1298701088346443 0.0008860249697946033 0.004804965521323496 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 35728 6899 GTGIVSAPVPK True H1975_Epitope_Rep1 1024.59169529704 1024.5905899358602 31.577 2 0.1298653109780647 0.0008860249697946033 0.004805494534724102 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 37593 11512 GVVPTIQKV True PC9_epitope_Rep4 939.5753169569098 939.57420993586 52.042 2 0.12986071655031522 0.0008860249697946033 0.004806001171714016 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 91817 6925 RKINQDGTFL True NCI_RA007_Epitope_Rep4 1190.64077074778 1190.6396699358602 33.258 2 0.12984834628629807 0.0008860249697946033 0.00480736552746853 ['ENSG00000043462|ENST00000046794|LCP2'] 12077 20209 DHTVGFIL True PC9_epitope_Rep5 900.4705175351999 900.46942993586 82.78 2 0.12984596829440892 0.0008860249697946033 0.004807627847433229 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 88606 13040 QTDQMVFNAY True H1975_Epitope_Rep2 1215.52302368387 1215.5224749679298 55.278 1 0.1298437398335385 0.0008860249697946033 0.0048078736851857725 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 77245 8485 NRYDGIYKV True PC9_epitope_Rep4 1126.5771078620598 1126.5754649037901 40.111 3 0.12983869206624282 0.0008860249697946033 0.004808430586918628 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 105719 9338 SSEVTSQLY True H1975_Epitope_Rep2 1012.47130538084 1012.47020993586 40.879 2 0.12983654964672892 0.0008860249697946033 0.004808666971429632 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB'] 97836 12155 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 51.839 1 0.12982287051364716 0.0008860249697946033 0.0048101765323977355 ['ENSG00000126247|ENST00000246533|CAPNS1'] 1660 9150 AEFVEVTK True PC9_epitope_Rep3 921.4807478657299 921.47964993586 40.138 2 0.12981730423667073 0.0008860249697946033 0.004810790932477744 ['CON__P02769'] 92774 19582 RPADVIFATV True PC9_epitope_Rep1 1087.60259433391 1087.6014899358602 80.149 2 0.12981526154372877 0.0008860249697946033 0.0048110164222503315 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 76884 10220 NRDLATPVM True PC9_epitope_Rep4 1015.51206507735 1015.51096993586 46.989 2 0.1298069487787704 0.0008860249697946033 0.004811934163048591 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 140183 8230 YQTEKGITV True PC9_epitope_Rep2 1037.5393253710097 1037.53822993586 37.014 2 0.129805067020449 0.0008860249697946033 0.00481214193569413 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 114593 9370 TQDGTWRTV True PC9_epitope_Rep3 1062.50942222506 1062.50832993586 40.981 2 0.12980022028487 0.0008860249697946033 0.004812677124281084 ['ENSG00000170779|ENST00000336219|CDCA4'] 117230 21667 TVLQELINV True PC9_epitope_Rep4 1027.5913609438699 1027.59026993586 91.537 2 0.12979810773291411 0.0008860249697946033 0.004812910415847291 ['ENSG00000138160|ENST00000260731|KIF11'] 77328 13423 NSDVSLLNY True H1975_Epitope_Rep3 1023.48728979815 1023.48677496793 56.902 1 0.12979674516908363 0.0008860249697946033 0.004813060891257474 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 4803 12998 ALEAVFGK True PC9_epitope_Rep1 833.4647038787699 833.46360993586 54.867 2 0.1297886051444555 0.0008860249697946033 0.004813959935352282 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX', 'ENST00000565907.1_1_X:135961433-135961586:-|nuORF'] 75833 15576 NLPDEIYHV True PC9_epitope_Rep6 1098.5345743437401 1098.53346993586 72.121 2 0.12978805604813115 0.0008860249697946033 0.0048140205875322395 ['ENSG00000148335|ENST00000372483|NTMT1'] 22671 9572 ETQALILAPTR True H1975_Epitope_Rep3 1211.6873865870298 1211.68628993586 41.827 2 0.12978774734346238 0.0008860249697946033 0.004814054686817973 ['ENSG00000141543|ENST00000649764|EIF4A3'] 53391 18456 KQVEEIFNL True PC9_epitope_Rep4 1118.5971746003 1118.5960699358602 79.061 2 0.12978544063333147 0.0008860249697946033 0.004814309491809484 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 71214 20808 LYPEGLAQL True PC9_epitope_Rep2 1002.5385970950199 1002.53807496793 85.479 1 0.1297675074372437 0.0008860249697946033 0.004816290890395721 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 132921 15846 VVMQEGLAHI True PC9_epitope_Rep3 1095.5746653339097 1095.5735699358602 66.104 2 0.1297672588374232 0.0008860249697946033 0.0048163183632705525 ['ENSG00000152684|ENST00000274311|PELO'] 35405 10655 GSDFYSMHY True H1975_Epitope_Rep2 1105.41749598617 1105.41638993586 46.009 2 0.12976088268862473 0.0008860249697946033 0.00481702304696512 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 3966 8181 AHDSSEYAI True PC9_epitope_Rep1 991.42468954159 991.42358993586 36.301 2 0.12975938067298678 0.0008860249697946033 0.004817189062550249 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 95197 12383 RVIGTLEEV True PC9_epitope_Rep4 1014.57095985246 1014.56986993586 55.436 2 0.12975741628989543 0.0008860249697946033 0.004817406191428895 ['ENSG00000100401|ENST00000356244|RANGAP1'] 99060 12278 SHGEPTITSL True PC9_epitope_Rep1 1040.51383889916 1040.51274993586 52.083 2 0.12974928359418925 0.0008860249697946033 0.004818305224013007 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 101357 21644 SLITRLLEV True PC9_epitope_Rep2 1042.63864548946 1042.63754993586 88.728 2 0.12974847743412293 0.0008860249697946033 0.0048183943503417506 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 95943 12973 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.6154299358602 54.91 2 0.12974552249402904 0.0008860249697946033 0.004818721052390492 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 87869 16106 QRIDEFEAL True PC9_epitope_Rep4 1119.5560380643099 1119.5549499358601 69.889 2 0.12973629013176455 0.0008860249697946033 0.0048197419349144495 ['ENSG00000092820|ENST00000367075|EZR'] 29394 15442 FVDPNGKISL True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 67.33 2 0.12973302906159656 0.0008860249697946033 0.004820102583580263 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 8005 3142 ATDKSFVEK True NCI_RA007_Epitope_Rep4 1023.5236753068699 1023.5225699358599 17.569 2 0.12972474791721655 0.0008860249697946033 0.004821018532245367 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 83282 16977 PTDAFTVFY True H1975_Epitope_Rep1 1059.49131254943 1059.49020993586 70.725 2 0.12972293138474125 0.0008860249697946033 0.004821219475508841 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 114627 19385 TQDTNTFFL True PC9_epitope_Rep6 1085.50293986229 1085.50184993586 87.215 2 0.1297181501193837 0.0008860249697946033 0.0048217484143759 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 17295 15820 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 65.843 2 0.1297166542666286 0.0008860249697946033 0.0048219139083764805 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 113070 5723 TLNQIDSVK True H1975_Epitope_Rep3 1016.5502244078799 1016.54912993586 27.042 2 0.12970537566671866 0.0008860249697946033 0.004823161898740228 ['CON__P12763'] 40502 11324 HRDSGILGL True PC9_epitope_Rep4 966.5246783663799 966.52358993586 51.338 2 0.12970162037168798 0.0008860249697946033 0.004823577497086358 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 99356 15839 SHTDVVPVF True PC9_epitope_Rep2 999.50254593947 999.50144993586 66.183 2 0.12968952908171705 0.0008860249697946033 0.004824915879056825 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 128625 9771 VPVDTGVAA True PC9_epitope_Rep2 827.4388830537498 827.43833496793 42.923 1 0.12968578530567437 0.0008860249697946033 0.004825330350807443 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 7577 8231 ASETLQSPGY True H1975_Epitope_Rep3 1051.48220441771 1051.4816749679298 36.644 1 0.12968341255119564 0.0008860249697946033 0.004825593055520172 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1'] 6346 6755 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 30.788 2 0.12968172823059287 0.0008860249697946033 0.004825779547308439 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 60621 20339 LHIGSVITL True PC9_epitope_Rep1 951.5753169569101 951.57420993586 83.064 2 0.12968033377082272 0.0008860249697946033 0.004825933950415729 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 107550 8936 SVPEEFHTT True PC9_epitope_Rep5 1045.47163973401 1045.4705499358602 39.317 2 0.1296795099592178 0.0008860249697946033 0.004826025170155192 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 86144 10750 QIDPSIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 46.238 2 0.1296794231941453 0.0008860249697946033 0.004826034777653573 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.R165S|1|0.22|ENSG00000186081|chr12:52519802-52519802|C/A|missense_variant'] 104197 20984 SQFQQEFPSL True PC9_epitope_Rep5 1209.5666027480097 1209.56550993586 85.776 2 0.12967564310812987 0.0008860249697946033 0.00482645336493306 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 44463 14560 ILLAELEQLK True H1975_Epitope_Rep1 1168.7067250492798 1168.70562993586 61.211 2 0.1296697909272102 0.0008860249697946033 0.004827101475811994 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 44512 22706 ILLPQFLGV True PC9_epitope_Rep4 998.6164534928998 998.61534993586 95.566 2 0.12966941324539893 0.0008860249697946033 0.004827143305842373 ['ENSG00000099282|ENST00000373290|TSPAN15'] 87883 14819 QRIDEFESM True PC9_epitope_Rep1 1153.5073736197298 1153.50626993586 61.822 2 0.12966893922977396 0.0008860249697946033 0.004827195805798786 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 35839 4587 GTLNQPLTK True NCI_RA007_Epitope_Rep3 970.54474510462 970.54364993586 24.937 2 0.1296676929655348 0.0008860249697946033 0.004827333839410765 ['ENSG00000103671|ENST00000261884|TRIP4'] 120244 2755 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 14.681 2 0.12966736188603958 0.0008860249697946033 0.0048273705097338655 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 70632 25307 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 109.36 3 0.1296601710095 0.0008860249697946033 0.004828167037944624 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 57507 12061 LEDLPTVEA True H1975_Epitope_Rep1 985.49679185269 985.49624496793 51.403 1 0.12965781701559223 0.0008860249697946033 0.0048284278162493465 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 118752 20566 TYYRGFLTL True PC9_epitope_Rep1 1132.59169529704 1132.5905899358602 83.921 2 0.12965629550666638 0.0008860249697946033 0.0048285963782306405 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 6633 18904 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 77.499 2 0.12964930171428243 0.0008860249697946033 0.004829371267426104 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 140177 16170 YQTEIGQTL True PC9_epitope_Rep5 1051.51858992643 1051.51807496793 67.187 1 0.12964017117475243 0.0008860249697946033 0.0048303830853304005 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 41066 4792 HTLNQIDSVK True PC9_epitope_Rep4 1153.6091362663299 1153.60802993586 25.006 2 0.1296381330451351 0.0008860249697946033 0.0048306089729724415 ['CON__P12763'] 77129 9940 NRNELAETL True PC9_epitope_Rep2 1058.5356369729 1058.53452993586 43.564 2 0.12963802740054312 0.0008860249697946033 0.004830620681935928 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1'] 14153 10814 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep3 1086.45394144498 1086.45284993586 46.675 2 0.1296338662564247 0.0008860249697946033 0.004831081898458298 ['ENSG00000149823|ENST00000279281|VPS51'] 8044 6688 ATDPNILGR True NCI_RA007_Epitope_Rep5 955.50869394907 955.50758993586 32.395 2 0.12963290899896293 0.0008860249697946033 0.004831188005926449 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 93053 7433 RPNDIM[Oxidation]AEV True PC9_epitope_Rep2 1059.50189469691 1059.5007899358602 33.966 2 0.1296285615156714 0.0008860249697946033 0.004831669932772362 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 120437 3859 VEEPSRPSA True H1975_Epitope_Rep2 970.4719740871799 970.47086993586 19.878 2 0.12962783967215596 0.0008860249697946033 0.004831749955086956 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 75748 22010 NLLKLIAEV True PC9_epitope_Rep3 1011.6328318330299 1011.63172993586 89.959 2 0.12962555888931082 0.0008860249697946033 0.004832002807269808 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 88014 18003 QRPGIEDVAVL True PC9_epitope_Rep5 1195.6560864587498 1195.6549899358602 74.266 2 0.12962259185533287 0.0008860249697946033 0.004832331758122028 ['ENSG00000102189|ENST00000322349|EEA1', 'EEA1|p.S653*|1|0.32|ENSG00000102189|chr12:92813065-92813065|G/-|frameshift_variant'] 8122 8703 ATEESDLAQQY True H1975_Epitope_Rep1 1253.54117584581 1253.5400699358602 38.402 2 0.12962245158269625 0.0008860249697946033 0.004832347310495944 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 105660 14552 SSEELPLYY True H1975_Epitope_Rep3 1099.5073565363898 1099.50624993586 61.341 2 0.12962151233627542 0.0008860249697946033 0.004832451448337038 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 74828 10118 NHEDKIRVVL True PC9_epitope_Rep1 1221.6829699129298 1221.68131490379 43.792 3 0.129618781889213 0.0008860249697946033 0.0048327541959810524 ['ENSG00000110047|ENST00000320631|EHD1'] 132820 17739 VVLGEFGVRNV True PC9_epitope_Rep4 1187.6662572196299 1187.6651699358601 76.256 2 0.12961649928958427 0.0008860249697946033 0.004833007301333314 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 4470 11411 AIVDKVPSV True PC9_epitope_Rep6 926.54368247546 926.54258993586 54.951 2 0.1296153176675827 0.0008860249697946033 0.0048331383302463084 ['ENSG00000181789|ENST00000314797|COPG1'] 117903 9063 TWNPGRPEPGS True PC9_epitope_Rep1 1196.55743504664 1196.55632993586 39.711 2 0.12961441833340603 0.0008860249697946033 0.004833238058879883 ['CON__P02672'] 61983 16185 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.5007899358602 67.465 2 0.12961300263098538 0.0008860249697946033 0.004833395052532668 ['ENSG00000105397|ENST00000525621|TYK2'] 22269 8235 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4494699358602 36.627 2 0.12960627099056052 0.0008860249697946033 0.004834141623282107 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 111475 20548 THVFVIAEL True PC9_epitope_Rep1 1027.5702315764697 1027.56912993586 83.85 2 0.12960569971392166 0.0008860249697946033 0.004834204985785231 ['ENSG00000272047|ENST00000607778|GTF2H5'] 68906 7259 LTNQEPIA True H1975_Epitope_Rep3 884.4603467743199 884.45924993586 32.894 2 0.12960501883081163 0.0008860249697946033 0.004834280506233718 ['ENST00000370382.7_2_1:92546128-92605069:+|nuORF', 'nc|ENSG00000189195|Q5XKL5-4|BTBD8', 'nc|ENSG00000189195|Q5XKL5|BTBD8'] 65407 14375 LREPLPATL True PC9_epitope_Rep4 1008.59678067748 1008.59568993586 63.202 2 0.12960125063125888 0.0008860249697946033 0.004834698478728476 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 88967 15623 QVIEKFEAL True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 68.018 2 0.12959320564353877 0.0008860249697946033 0.004835590955879609 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 77140 6348 NRPGTVSSL True PC9_epitope_Rep3 929.49304388493 929.49194993586 29.445 2 0.12959033349870266 0.0008860249697946033 0.004835909618831277 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 77215 16939 NRTELPLTL True PC9_epitope_Rep4 1055.59750895347 1055.59640993586 73.146 2 0.1295847631484901 0.0008860249697946033 0.004836527705141809 ['ENSG00000105447|ENST00000253237|GRWD1'] 97507 5073 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 24.595 2 0.1295723235822373 0.0008860249697946033 0.004837908280601817 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 104359 16238 SQISDTSVVL True PC9_epitope_Rep6 1047.5448046742702 1047.54370993586 74.823 2 0.12956442473914984 0.0008860249697946033 0.004838785116047435 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 106536 21147 STLSDLRVYL True PC9_epitope_Rep1 1165.63428838501 1165.6331899358602 86.174 2 0.1295643721594791 0.0008860249697946033 0.0048387909533398644 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 104131 5034 SQEGRPVQV True PC9_epitope_Rep5 998.5145076054997 998.51340993586 24.394 2 0.129559448335268 0.0008860249697946033 0.0048393376173998855 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 106998 6935 SVFAGVGER True NCI_RA007_Epitope_Rep3 920.4715801643599 920.47048993586 34.387 2 0.12955561007543623 0.0008860249697946033 0.004839763799598461 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 106838 17135 SVASELEKI True PC9_epitope_Rep5 974.5284263341399 974.5273299358599 70.931 2 0.12955358350665497 0.0008860249697946033 0.004839988835096864 ['ENSG00000172244|ENST00000306862|C5orf34'] 141439 9170 YTFPNGAKY True H1975_Epitope_Rep2 1059.5025459394699 1059.5014499358601 40.225 2 0.1295517059200341 0.0008860249697946033 0.004840197336414249 ['nc|ENSG00000188010|Q502X0|MORN2', 'ENSG00000188010|ENST00000644631|MORN2'] 11771 11185 DHDITSQL True PC9_epitope_Rep1 927.42977492203 927.42866993586 47.907 2 0.1295489532634303 0.0008860249697946033 0.004840503028049206 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 88554 13731 QTDFGMYDY True H1975_Epitope_Rep2 1138.4277263166998 1138.42717496793 57.962 1 0.12954205824763776 0.0008860249697946033 0.00484126882578181 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'ENST00000463608.5_1_22:21830433-21838406:-|nuORF', 'ENST00000450651.5_1_22:21830386-21841179:-|nuORF', 'ENST00000492581.5_1_22:21065434-21067334:-|nuORF', 'ENST00000466772.5_1_22:21065465-21081626:-|nuORF', 'ENST00000486209.5_1_22:21830876-21832684:-|nuORF'] 15339 5029 EAGEQGDIEPR True PC9_epitope_Rep3 1199.5418445521498 1199.54074993586 24.432 2 0.12954067778254869 0.0008860249697946033 0.004841422162019862 ['ENSG00000145907|ENST00000356245|G3BP1'] 124968 10707 VHTIVNETL True PC9_epitope_Rep6 1024.55530978832 1024.5542099358602 51.995 2 0.12954034033867964 0.0008860249697946033 0.0048414596445879666 ['ENSG00000023516|ENST00000025301|AKAP11'] 15306 13231 EAFNMIDQNR True PC9_epitope_Rep1 1236.5557207944798 1236.55462993586 55.759 2 0.12952889356922478 0.0008860249697946033 0.0048427312972315235 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 137408 5337 YEAPGVREA True H1975_Epitope_Rep3 990.4770594676198 990.47596993586 25.601 2 0.1295285218208804 0.0008860249697946033 0.004842772601271902 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 102627 23037 SLWQEIPVV True PC9_epitope_Rep1 1069.58079626017 1069.5796899358602 93.411 2 0.12951535098721398 0.0008860249697946033 0.00484423620377299 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 12478 9173 DKDDTQQIL True PC9_epitope_Rep4 1074.51931820242 1074.51822993586 42.879 2 0.1295130561248116 0.0008860249697946033 0.004844491263761627 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 141874 20707 YVDPVITSI True PC9_epitope_Rep3 1005.53826274185 1005.53716993586 84.925 2 0.12950941550586928 0.0008860249697946033 0.00484489592350681 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 31818 10230 GEIPKVLVA True H1975_Epitope_Rep2 924.5644179200399 924.56332993586 44.355 2 0.12950910304926147 0.0008860249697946033 0.004844930655033141 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 45309 19670 IPYHIVNIV True PC9_epitope_Rep5 1066.6175161220601 1066.61640993586 80.715 2 0.12950837095272147 0.0008860249697946033 0.004845012033148985 ['ENSG00000031698|ENST00000234677|SARS1'] 6839 17437 AQFHPTEDLVV True PC9_epitope_Rep5 1254.6244519773002 1254.62334993586 72.072 2 0.1295078368700779 0.0008860249697946033 0.004845071401357926 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 31432 11164 GEAIPALAA True H1975_Epitope_Rep1 811.44396843419 811.44341496793 47.91 1 0.12949499196993475 0.0008860249697946033 0.004846499446037736 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 82183 7377 PNSGSVSAY True PC9_epitope_Rep5 880.3926611373199 880.3921149679301 33.334 1 0.12949486074341626 0.0008860249697946033 0.004846514037414548 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 77477 7016 NTAQGFRTV True PC9_epitope_Rep1 992.5039429218 992.50284993586 31.793 2 0.12949010791489948 0.0008860249697946033 0.004847042544423199 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 998 7091 AEAAPPLRP True H1975_Epitope_Rep3 920.50796567308 920.50686993586 32.243 2 0.12948952822384685 0.0008860249697946033 0.004847107009030388 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 79244 6094 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 30.957 2 0.1294851578401734 0.0008860249697946033 0.004847593045180204 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 141806 18563 YVDDFGVSV True PC9_epitope_Rep6 999.4549270407099 999.4543749679301 84.042 1 0.12948443665246104 0.0008860249697946033 0.0048476732540287636 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 115218 6579 TRDSVKTVL True PC9_epitope_Rep1 1017.58185888933 1017.58076993586 30.111 2 0.12948372619534643 0.0008860249697946033 0.0048477522707215115 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 1647 6996 AEFVEVTK True NCI_RA007_Epitope_Rep1 921.4807478657299 921.47964993586 31.211 2 0.12948259786267782 0.0008860249697946033 0.004847877765933333 ['CON__P02769'] 110099 5154 TEMEHEVAC True H1975_Epitope_Rep2 1047.40013166987 1047.3990299358602 24.902 2 0.1294760649799778 0.0008860249697946033 0.004848604427859883 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 87699 19444 QQYNSFVSL True PC9_epitope_Rep4 1084.5189242796 1084.5178299358602 82.904 2 0.1294746635068941 0.0008860249697946033 0.004848760329684048 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 84649 16523 QDGQFSVLFTK True H1975_Epitope_Rep3 1268.6401020414398 1268.63900993586 69.052 2 0.1294737083419545 0.0008860249697946033 0.004848866586392722 ['CON__P12763'] 100889 5595 SLETENAGLR True H1975_Epitope_Rep3 1088.5462016566 1088.5451099358602 26.561 2 0.12946967931889655 0.0008860249697946033 0.004849314817681863 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 128864 9252 VQDNPRALV True PC9_epitope_Rep2 1010.5508931142199 1010.54978993586 40.926 2 0.12944574547015186 0.0008860249697946033 0.0048519783135170195 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89'] 21310 13605 EREQVIAAL True PC9_epitope_Rep5 1027.5662088251897 1027.5651099358602 57.354 2 0.1294437152023462 0.0008860249697946033 0.004852204319565763 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 16117 9361 EEALPVTTA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 40.969 1 0.12944362252019456 0.0008860249697946033 0.004852214637036539 ['ENSG00000184897|ENST00000333762|H1-10'] 31969 6519 GEPTNFVHTA True NCI_RA007_Epitope_Rep4 1071.49852318819 1071.49742993586 31.68 2 0.12944205859167496 0.0008860249697946033 0.004852388738394645 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 17285 14150 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 62.33 2 0.1294387261556159 0.0008860249697946033 0.004852759735980254 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 27782 21344 FQAEIAQLM True PC9_epitope_Rep3 1049.52156713189 1049.52097496793 87.397 1 0.12943484855085668 0.0008860249697946033 0.004853191461913006 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 48439 8573 IYYITGETK True NCI_RA007_Epitope_Rep1 1086.55972646242 1086.5586299358602 37.349 2 0.12943393382391435 0.0008860249697946033 0.00485329331156657 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 89541 19566 QYLQDAYSF True PC9_epitope_Rep4 1133.5029398622898 1133.5023749679299 83.383 1 0.12942673101153057 0.0008860249697946033 0.004854095377322048 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 47759 21691 IYEPNFIFF True NCI_RA007_Epitope_Rep2 1188.5855472874398 1188.5844499358602 89.878 2 0.12942636255908768 0.0008860249697946033 0.0048541364096748515 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 88490 22019 QSVDLVFPV True PC9_epitope_Rep2 1002.5385970950199 1002.53807496793 90.167 1 0.12941328876610542 0.0008860249697946033 0.004855592580979143 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 11898 15534 DHIRVIVQL True PC9_epitope_Rep4 1091.64512785223 1091.64402993586 67.676 2 0.12941320281652927 0.0008860249697946033 0.004855602155545217 ['ENSG00000160445|ENST00000291900|ZER1'] 118107 21555 TYGPSFPAF True PC9_epitope_Rep5 985.4545331178899 985.4539849679301 87.949 1 0.12941267735943918 0.0008860249697946033 0.004855660690544091 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 14147 10835 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 46.705 2 0.129408728165318 0.0008860249697946033 0.004856100646063856 ['ENSG00000149823|ENST00000279281|VPS51'] 105051 6368 SRDPSTNVI True PC9_epitope_Rep2 987.49852318819 987.4974299358599 29.899 2 0.12940685240888491 0.0008860249697946033 0.004856309626332101 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000509683.5_1_4:42065060-42077708:+|nuORF'] 40435 13685 HRAPIFMRV True PC9_epitope_Rep1 1125.62295293901 1125.6213149037899 57.492 3 0.12940539969573445 0.0008860249697946033 0.004856471480921684 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 106729 4317 STVSADPVVK True NCI_RA007_Epitope_Rep3 1001.5393253710099 1001.53822993586 23.721 2 0.12940496141619762 0.0008860249697946033 0.004856520313045476 ['ENSG00000136051|ENST00000332180|WASHC4'] 23312 7548 EVQLVESGG True NCI_RA007_Epitope_Rep3 916.4501760134399 916.44906993586 36.812 2 0.12940030584238457 0.0008860249697946033 0.004857039056465799 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 88161 9478 QRVDSPVTV True PC9_epitope_Rep5 999.5349086969098 999.53380993586 41.413 2 0.1293961292800911 0.0008860249697946033 0.004857504472814638 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 139784 7599 YPGEITSD True H1975_Epitope_Rep3 880.38142774728 880.38087496793 34.21 1 0.1293865824691377 0.0008860249697946033 0.00485856848904782 ['ENSG00000151952|ENST00000422113|TMEM132D'] 26945 13402 FLDSQNLSAY True H1975_Epitope_Rep2 1156.540053647 1156.53894993586 56.685 2 0.12938626080754606 0.0008860249697946033 0.004858604343038598 ['DPP3-FKBP2|1|fusion', 'nc|ENSG00000254986|Q9NY33-4|DPP3', 'DPP3-FKBP2|2|fusion', 'ENSG00000254986|ENST00000531863|DPP3'] 22467 16372 ETEYSFLDY True H1975_Epitope_Rep2 1165.4815357113698 1165.48042993586 68.195 2 0.12938617757285178 0.0008860249697946033 0.0048586136208313944 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 71743 10934 MEENFAVEA True H1975_Epitope_Rep3 1038.4328116971399 1038.43227496793 47.145 1 0.12938104417012697 0.0008860249697946033 0.0048591858515710995 ['ENSG00000026025|ENST00000544301|VIM'] 84129 14468 PYAKPIPAQF True PC9_epitope_Rep5 1130.6124307416196 1130.61132993586 60.652 2 0.12937387567330105 0.0008860249697946033 0.004859985049290555 ['ENSG00000136709|ENST00000322313|WDR33'] 99385 11270 SHTSVGNIL True PC9_epitope_Rep5 926.48214484806 926.48104993586 48.342 2 0.12937099851680264 0.0008860249697946033 0.004860305852612445 ['ENSG00000160190|ENST00000352133|SLC37A1', 'ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'nc|ENSG00000134955|Q8TED4-3|SLC37A2', 'ENST00000526405.5_1_11:124933263-124955028:+|nuORF'] 97960 10243 SENPSVYVP True NCI_RA007_Epitope_Rep3 990.4658260775799 990.46472993586 47.368 2 0.12936739935976543 0.0008860249697946033 0.004860707188417931 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 129039 18943 VQNDTLLQV True PC9_epitope_Rep3 1028.5502244078798 1028.5496749679298 78.089 1 0.12936614120191037 0.0008860249697946033 0.004860847491124748 ['ENSG00000184897|ENST00000333762|H1-10'] 7278 13665 ARDNTINLI True PC9_epitope_Rep2 1028.56145779792 1028.56036993586 57.854 2 0.12936490024496788 0.0008860249697946033 0.004860985879585018 ['ENSG00000163466|ENST00000315717|ARPC2'] 114566 19157 TQDAVPLTL True PC9_epitope_Rep4 956.51786165044 956.51731496793 81.785 1 0.12936414377196817 0.0008860249697946033 0.004861070241491386 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 9361 11795 AVSDGVIKV True PC9_epitope_Rep3 886.5123823471799 886.51128993586 50.385 2 0.12936056100949808 0.0008860249697946033 0.00486146981090465 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 4142 8758 AHTAEVNCL True PC9_epitope_Rep1 956.43856578392 956.43746993586 38.526 2 0.12935426257510785 0.0008860249697946033 0.0048621723253453614 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 41875 4161 IC[Carbamidomethyl]DNQDTISSK True NCI_RA007_Epitope_Rep2 1279.5714307076998 1279.5703299358602 20.825 2 0.12935320322607705 0.0008860249697946033 0.004862290492772209 ['CON__P02769'] 32903 10729 GHVAPSVSL True PC9_epitope_Rep5 865.4657665079301 865.46466993586 46.261 2 0.12933766818258893 0.0008860249697946033 0.004864023708040808 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 12696 12639 DLDSRVLYY True H1975_Epitope_Rep3 1142.5607890915799 1142.56027496793 53.821 1 0.1293350684125625 0.0008860249697946033 0.004864313818801186 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 105061 13787 SRDPVQLNL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 60.927 2 0.12932671423191697 0.0008860249697946033 0.004865246184847559 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 69627 13003 LVDPSVYGY True H1975_Epitope_Rep3 1011.49131254943 1011.4907749679301 55.25 1 0.1293182420894328 0.0008860249697946033 0.004866191895539339 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 49913 19286 KIIGIMEEV True PC9_epitope_Rep5 1030.5732683515798 1030.57216993586 79.227 2 0.12930814401828472 0.0008860249697946033 0.004867319338241913 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 109642 10761 TEAPIAVVT True H1975_Epitope_Rep2 899.4963979298699 899.4958449679301 46.422 1 0.1293049367479234 0.0008860249697946033 0.00486767748153914 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 70607 25844 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 107.59 3 0.12930357794570224 0.0008860249697946033 0.004867829221469698 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 75287 17905 NIIPRFVQV True PC9_epitope_Rep6 1084.6393141958001 1084.63820993586 81.496 2 0.12930228041523822 0.0008860249697946033 0.004867974123414208 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 33521 20214 GLDSQFVEV True PC9_epitope_Rep3 992.4814761417199 992.48036993586 83.011 2 0.12929771063162593 0.0008860249697946033 0.004868484488597291 ['ENSG00000131389|ENST00000622186|SLC6A6'] 106458 6335 STITGVMDK True NCI_RA007_Epitope_Rep4 950.4742825863 950.47318993586 30.973 2 0.1292922417353677 0.0008860249697946033 0.004869095338182372 ['ENSG00000147872|ENST00000276914|PLIN2'] 26353 9967 FHSGDDSQVL True PC9_epitope_Rep3 1103.48835242731 1103.48724993586 43.295 2 0.12928925675853492 0.0008860249697946033 0.0048694287776398755 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 8270 4233 ATIDGSVNPK True NCI_RA007_Epitope_Rep4 1000.5189242796 1000.51782993586 22.598 2 0.12928824841920564 0.0008860249697946033 0.004869541420145323 ['ENSG00000116830|ENST00000369466|TTF2', 'ENST00000463696.1_1_1:117637951-117640053:+|nuORF', 'ENST00000492682.5_1_1:117635418-117640830:+|nuORF'] 90302 4524 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6032899358602 22.523 2 0.12927343733423213 0.0008860249697946033 0.004871196275320367 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 24578 18930 FAHVIFQNV True PC9_epitope_Rep3 1073.56581490237 1073.56470993586 78.037 2 0.1292724187775185 0.0008860249697946033 0.00487131009986041 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'ENST00000490455.1_1_7:27788143-27797760:+|nuORF'] 138410 14138 YHHGYSYIL True PC9_epitope_Rep1 1151.53999407735 1151.5388899358602 59.206 2 0.12926963370596145 0.0008860249697946033 0.00487162134722694 ['ENSG00000134531|ENST00000256951|EMP1'] 37895 18600 GYSEHFVEF True PC9_epitope_Rep5 1113.47672511445 1113.47562993586 76.569 2 0.129267422735438 0.0008860249697946033 0.0048718684495125415 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 114821 21375 TQLNMFQTL True PC9_epitope_Rep2 1094.54303085246 1094.54192993586 87.688 2 0.1292602727981314 0.0008860249697946033 0.004872667624560036 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 26358 10108 FHSGGYGQDAL True PC9_epitope_Rep2 1150.50433684462 1150.5032299358602 44.218 2 0.1292591534703652 0.0008860249697946033 0.004872792747655582 ['ENSG00000168036|ENST00000349496|CTNNB1'] 27899 21598 FQDSVFNDL True PC9_epitope_Rep1 1083.48728979815 1083.48618993586 87.9 2 0.1292585549363968 0.0008860249697946033 0.004872859655559423 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 103932 17751 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51234993586 73.076 2 0.12925742190201658 0.0008860249697946033 0.004872986315766731 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 118504 10529 TYQDIQNTI True NCI_RA007_Epitope_Rep4 1094.52440358286 1094.52387496793 47.346 1 0.1292550927290768 0.0008860249697946033 0.004873246700674332 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 43361 5639 IGAEVYHNLK True NCI_RA007_Epitope_Rep5 1142.60840799034 1142.60730993586 28.379 2 0.12925007342673758 0.0008860249697946033 0.004873807869372485 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 90992 16887 RFEEAHFTF True PC9_epitope_Rep3 1182.5458077337796 1182.54470993586 70.111 2 0.12924467845845736 0.0008860249697946033 0.0048744111092038625 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 9862 12268 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 52.498 2 0.12923876092588757 0.0008860249697946033 0.004875072864163481 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 9878 10965 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 53.064 2 0.12923688853518006 0.0008860249697946033 0.004875282271164302 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 84174 22625 PYISNIYLI True PC9_epitope_Rep5 1094.60119735158 1094.60010993586 92.026 2 0.12923402420664162 0.0008860249697946033 0.004875602632990352 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 76471 9812 NQGESITHAL True PC9_epitope_Rep5 1068.51998690876 1068.5188899358602 42.709 2 0.12923349481949337 0.0008860249697946033 0.004875661844748141 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 9967 22903 AYPEYLITF True PC9_epitope_Rep1 1115.55391280599 1115.55280993586 92.894 2 0.12923278164375093 0.0008860249697946033 0.004875741614310918 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP15|p.Q667E|1|0.22|ENSG00000173200|chr3:122636062-122636062|C/G|missense_variant', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 88145 7399 QRSQTQTIL True PC9_epitope_Rep5 1073.58292151849 1073.58182993586 33.417 2 0.12923172042355646 0.0008860249697946033 0.004875860315439841 ['ENSG00000164151|ENST00000296564|ICE1'] 1279 8967 AEDLPVTEA True H1975_Epitope_Rep1 943.44984166027 943.4492949679301 39.396 1 0.12923114910330838 0.0008860249697946033 0.0048759242207518155 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 9861 12177 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 52.151 2 0.1292311316495722 0.0008860249697946033 0.0048759261730611705 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 2567 7904 AEQRVPLSV True H1975_Epitope_Rep3 997.5556441414899 997.55454993586 35.376 2 0.1292269106908744 0.0008860249697946033 0.004876398336222337 ['ENSG00000125826|ENST00000356286|RBCK1'] 86613 12894 QLEQDVLSY True H1975_Epitope_Rep2 1093.5291546101298 1093.52804993586 54.709 2 0.1292241995038758 0.0008860249697946033 0.004876701637638832 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 139604 18370 YLYDLNHTL True PC9_epitope_Rep4 1150.5658744720201 1150.56476993586 78.726 2 0.12921786528126375 0.0008860249697946033 0.004877410321611876 ['ENSG00000110057|ENST00000227471|UNC93B1'] 97744 11021 SEILYSAPP True H1975_Epitope_Rep3 975.49131254943 975.4907649679301 47.481 1 0.1292173849220688 0.0008860249697946033 0.004877464069176274 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 140293 9107 YRAQPSVSL True PC9_epitope_Rep6 1019.5399940773499 1019.53888993586 45.12 2 0.1292157312908282 0.0008860249697946033 0.0048776490990300675 ['ENSG00000239306|ENST00000310137|RBM14'] 35750 14779 GTIDEIQKL True PC9_epitope_Rep2 1015.5549754351499 1015.55386993586 62.111 2 0.12921415730215208 0.0008860249697946033 0.004877825223847608 ['ENSG00000167986|ENST00000301764|DDB1'] 118440 16626 TYPENWRAF True PC9_epitope_Rep4 1182.5458077337798 1182.54470993586 71.921 2 0.1292084804961056 0.0008860249697946033 0.004878460494128067 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 995 7218 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 32.698 2 0.12919665294414015 0.0008860249697946033 0.004879784332969272 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 124910 10442 VHQLSEEL True PC9_epitope_Rep1 953.4818104948899 953.48070993586 45.053 2 0.1291909102382671 0.0008860249697946033 0.0048804272322205315 ['ENSG00000261150|ENST00000615648|EPPK1'] 88299 5610 QSEREYIRY True H1975_Epitope_Rep2 1242.5992998586198 1242.59764490379 26.581 3 0.12915686414889135 0.0009219175885842553 0.004884240423147768 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 121559 19091 VFDPKVFTF True PC9_epitope_Rep6 1098.57498260374 1098.57388993586 86.079 2 0.12915458027776616 0.0009219175885842553 0.004884496323514235 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 22381 15821 ETEEDKFLLLY True H1975_Epitope_Rep3 1398.6918628307799 1398.69127496793 66.304 1 0.1291538253943411 0.0009219175885842553 0.004884580908658173 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 104517 20670 SQNDGFFAV True PC9_epitope_Rep5 983.4348603024699 983.43431496793 84.562 1 0.1291484413568057 0.0009219175885842553 0.004885184235102139 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 46449 9663 ISTEVNPKL True PC9_epitope_Rep4 999.56006081559 999.55896993586 44.796 2 0.12913793659009062 0.0009219175885842553 0.004886361593117215 ['ENSG00000007545|ENST00000397412|CRAMP1'] 1818 7459 AEIAESVQA True H1975_Epitope_Rep2 916.45017601344 916.44962496793 33.638 1 0.1291368447790876 0.0009219175885842553 0.004886483977616974 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 26101 13802 FGQLFRPDNF True NCI_RA007_Epitope_Rep1 1239.6036569630699 1239.60254993586 57.704 2 0.12913589459710556 0.0009219175885842553 0.0048865904889318435 ['ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 141340 9187 YTDTYTEAY True H1975_Epitope_Rep1 1125.4502355830898 1125.4491299358601 40.244 2 0.12913293697145434 0.0009219175885842553 0.004886922040667801 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 1915 5134 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5965849037902 24.825 3 0.1291325985450369 0.0009219175885842553 0.0048869599798973965 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 115270 14332 TREGGSIPVTL True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 60.13 2 0.1291316764684386 0.0009219175885842553 0.004887063350590245 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 121871 16616 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 68.919 2 0.12912809398750932 0.0009219175885842553 0.00488746499005975 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 85741 16751 QHDFQAPYL True PC9_epitope_Rep1 1117.5192586327698 1117.5181699358602 69.26 2 0.12912784466185837 0.0009219175885842553 0.004887492943691091 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 97608 11232 SEEVTPIAV True H1975_Epitope_Rep3 943.4862271689899 943.48512993586 48.306 2 0.12912035440949224 0.0009219175885842553 0.00488833280126475 ['ENSG00000205339|ENST00000379719|IPO7'] 46624 8745 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 38.642 2 0.12911361994839274 0.0009219175885842553 0.004889088035615705 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 89603 21111 QYPVIIHLI True PC9_epitope_Rep1 1094.64881625034 1094.6477099358601 86.032 2 0.12910706751617934 0.0009219175885842553 0.004889822966540018 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 31996 5419 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 25.904 2 0.1291070382721614 0.0009219175885842553 0.004889826246837816 ['ENSG00000108344|ENST00000264639|PSMD3'] 43680 10101 IHDGM[Oxidation]NLEL True PC9_epitope_Rep6 1056.49099566004 1056.4898899358602 49.458 2 0.12910256930627206 0.0009219175885842553 0.004890327555616644 ['ENSG00000198258|ENST00000586895|UBL5'] 18127 13815 EIIRQLNGV True PC9_epitope_Rep1 1040.59784330664 1040.59674993586 57.983 2 0.1291003495493338 0.0009219175885842553 0.004890576576897695 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 54885 11209 KYPLLISRI True NCI_RA007_Epitope_Rep4 1101.69101541549 1101.6899099358602 50.005 2 0.12909920716991624 0.0009219175885842553 0.004890704738486594 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ENST00000474428.6_1_1:155922555-155932010:-|nuORF', 'ENST00000608543.1_1_1:155931890-155932010:-|nuORF'] 121376 6040 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 28.21 2 0.12908484777026516 0.0009219175885842553 0.004892315976675951 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 140349 7077 YRDPTTVTT True PC9_epitope_Rep1 1052.51383889916 1052.51274993586 32.029 2 0.12908368671290124 0.0009219175885842553 0.004892446279305268 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 28993 12333 FTEEGLDLHY True H1975_Epitope_Rep2 1222.5506183306998 1222.5495299358602 52.523 2 0.12908005013865048 0.0009219175885842553 0.004892854425231771 ['ENSG00000116198|ENST00000378230|CEP104'] 134644 20335 VYSQFITQL True PC9_epitope_Rep4 1097.5757108797297 1097.57460993586 86.363 2 0.12907573525254737 0.0009219175885842553 0.0048933387440010115 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 134450 12044 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 51.644 2 0.12907414908038947 0.0009219175885842553 0.004893516793680658 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 17876 17779 EHVPVVIGL True PC9_epitope_Rep4 961.5596668927699 961.55856993586 76.416 2 0.1290713592684809 0.0009219175885842553 0.004893829968789498 ['ENSG00000170677|ENST00000397942|SOCS6'] 67412 6143 LSSPATLNSR True PC9_epitope_Rep4 1044.5563724174801 1044.55526993586 30.648 2 0.12905850113850414 0.0009219175885842553 0.004895273634990127 ['CON__P00761'] 117098 22500 TVISLLTGL True PC9_epitope_Rep4 915.56408356687 915.5635349679301 94.776 1 0.1290582315401263 0.0009219175885842553 0.004895303909043034 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 111075 12068 THDLEGPPL True PC9_epitope_Rep5 977.4818104948899 977.48070993586 51.415 2 0.12905607961267765 0.0009219175885842553 0.004895545562370484 ['ENSG00000169564|ENST00000303577|PCBP1'] 121852 15865 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 66.282 2 0.12905493786368274 0.0009219175885842553 0.004895673781235582 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 64422 20229 LPNLQTVTV True PC9_epitope_Rep1 983.56514619603 983.56404993586 82.64 2 0.12904355619406713 0.0009219175885842553 0.004896952127834378 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 95127 12918 RVFIGNLNTA True PC9_epitope_Rep4 1103.60874234351 1103.60764993586 57.574 2 0.1290424706788665 0.0009219175885842553 0.004897074065992712 ['ENSG00000184672|ENST00000521268|RALYL', 'nc|ENSG00000184672|Q86SE5-3|RALYL'] 99595 7288 SIFDGRVVAK True NCI_RA007_Epitope_Rep3 1090.61349337078 1090.6123899358602 35.778 2 0.12904187076611953 0.0009219175885842553 0.004897141456708477 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 73048 15815 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 68.757 2 0.1290373253811809 0.0009219175885842553 0.004897652088505735 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 53012 11654 KPIEELQNV True PC9_epitope_Rep5 1068.58152453616 1068.5804299358601 49.822 2 0.12903684518711114 0.0009219175885842553 0.0048977060369094945 ['ENSG00000166920|ENST00000396650|C15orf48'] 27953 12203 FQEPNANSV True PC9_epitope_Rep5 1004.4563240230399 1004.45522993586 51.924 2 0.12903358217859687 0.0009219175885842553 0.004898072641882578 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122', 'ENST00000480931.1_1_3:128580492-128584319:-|nuORF', 'ENST00000448668.2_1_3:129200375-129202705:+|nuORF'] 57734 8648 LEEMEAPAA True H1975_Epitope_Rep2 959.4269980407098 959.42644496793 38.223 1 0.12902956161088475 0.0009219175885842553 0.004898524397132248 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 23729 21755 EYFSYPVSL True PC9_epitope_Rep2 1103.51752729727 1103.51642993586 89.151 2 0.12902935419984943 0.0009219175885842553 0.004898547703167524 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 42867 4042 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 20.677 2 0.12902831882132293 0.0009219175885842553 0.0048986640465757516 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 37996 13956 HALGLLYHV True PC9_epitope_Rep4 1021.5709002828102 1021.56980993586 61.584 2 0.12902781820571566 0.0009219175885842553 0.004898720300722067 ['ENSG00000181789|ENST00000314797|COPG1'] 138830 15433 YIYKDTIQV True PC9_epitope_Rep1 1141.60192562757 1141.60082993586 64.181 2 0.12902212741631866 0.0009219175885842553 0.004899359819055033 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 105675 16757 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.5113499358602 69.692 2 0.12901641890432794 0.0009219175885842553 0.004900001411509075 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 76609 19404 NQPGVLIQV True PC9_epitope_Rep2 966.5498304850599 966.54928496793 80.015 1 0.1290141106911489 0.0009219175885842553 0.004900260860221209 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 76045 9241 NM[Oxidation]DNM[Oxidation]FESY True H1975_Epitope_Rep2 1181.40052635357 1181.39942993586 40.501 2 0.12901193864153995 0.0009219175885842553 0.004900505016159475 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 6910 13103 AQIGSYVHV True PC9_epitope_Rep2 972.50288029264 972.50178993586 55.677 2 0.1290028403410581 0.0009219175885842553 0.004901527868727689 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 39856 7286 HPADSVVSV True PC9_epitope_Rep4 909.4555957470501 909.45448993586 35.34 2 0.12900011817576446 0.0009219175885842553 0.004901833941828121 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 2836 7154 AEVDRQVIP True NCI_RA007_Epitope_Rep3 1025.5505587610498 1025.54946993586 35.257 2 0.12899948460221183 0.0009219175885842553 0.004901905181867269 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 83297 10942 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 47.122 2 0.12899836392099673 0.0009219175885842553 0.004902031195576563 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 35395 15302 GSDEPAFMYY True H1975_Epitope_Rep2 1178.45902644498 1178.4579299358602 64.018 2 0.1289939033756746 0.0009219175885842553 0.004902532788038441 ['ENSG00000155096|ENST00000337198|AZIN1'] 134745 18773 VYTSKSDVWSF True PC9_epitope_Rep2 1317.62411762413 1317.6230299358601 77.58 2 0.12898601007210828 0.0009219175885842553 0.004903420521048918 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 76602 10954 NQMPTQPQV True PC9_epitope_Rep2 1041.49132963277 1041.49022993586 47.454 2 0.12898386976112497 0.0009219175885842553 0.004903661261791517 ['ENSG00000100393|ENST00000263253|EP300'] 8906 8446 AVFPSIVGRPR True NCI_RA007_Epitope_Rep3 1197.69822605425 1197.6965849037902 40.304 3 0.12898292722042531 0.0009219175885842553 0.004903767281823327 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 5265 17205 ALPSKLPTF True PC9_epitope_Rep4 972.56441792004 972.56332993586 74.184 2 0.12898272476782113 0.0009219175885842553 0.004903790054642325 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 108110 19185 SYDHVELTF True PC9_epitope_Rep5 1109.5029398622898 1109.50184993586 78.833 2 0.12897739260227856 0.0009219175885842553 0.004904389879091161 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2', 'ENST00000589834.1_1_17:73845679-73851408:-|nuORF', 'ENST00000590450.5_1_17:73845072-73851378:-|nuORF', 'ENST00000589241.5_1_17:73844624-73851319:-|nuORF', 'ENST00000587642.5_1_17:73844624-73847864:-|nuORF', 'nc|ENSG00000132471|Q969T9-2|WBP2', 'ENST00000592802.1_1_17:73847561-73851408:-|nuORF'] 60837 10887 LHVDPENFR True PC9_epitope_Rep5 1125.55670677065 1125.5550749037902 46.864 3 0.12897736712909402 0.0009219175885842553 0.0049043927447865576 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__Q3SX09'] 59689 8541 LGAPQTHLGLK True PC9_epitope_Rep2 1133.6556925359298 1133.65405490379 38.214 3 0.1289709592834382 0.0009219175885842553 0.004905113670212122 ['ENSG00000142634|ENST00000375980|EFHD2', 'nc|ENSG00000115468|Q9BUP0-2|EFHD1', 'ENSG00000115468|ENST00000264059|EFHD1'] 48396 8936 IYTSSVNRL True PC9_epitope_Rep4 1051.56620882519 1051.5651099358602 41.914 2 0.12896084637312533 0.0009219175885842553 0.00490625165219404 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 108435 21863 SYLPISPTF True PC9_epitope_Rep5 1023.52769805815 1023.5271749679301 89.132 1 0.12895843957394335 0.0009219175885842553 0.004906522521885918 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 17426 10385 EHDPVGQMV True PC9_epitope_Rep5 1010.44913046762 1010.44802993586 44.929 2 0.12895792289846048 0.0009219175885842553 0.004906580672289525 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 121864 15963 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 66.391 2 0.1289558271192116 0.0009219175885842553 0.00490681655342662 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 27164 16343 FLLEKGYEV True PC9_epitope_Rep6 1096.580461907 1096.57936993586 75.237 2 0.1289500705838155 0.0009219175885842553 0.004907464512120883 ['nc|ENSG00000112699|O60547-2|GMDS', 'ENSG00000112699|ENST00000380815|GMDS'] 115629 8318 TRVQEEPEL True PC9_epitope_Rep2 1099.5509526838698 1099.54984993586 37.36 2 0.12893747362722305 0.0009219175885842553 0.004908882725837095 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8'] 31310 18736 GDLENAFLNL True H1975_Epitope_Rep1 1104.54513902744 1104.54457496793 78.127 1 0.1289318983853362 0.0009219175885842553 0.004909510536630667 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 66093 5245 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6217549037901 25.259 3 0.12893023400633263 0.0009219175885842553 0.004909697972521539 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 76584 9614 NQLKTLQEV True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 44.606 2 0.12892578000068386 0.0009219175885842553 0.004910199599932846 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 108540 22564 SYMWTINNF True PC9_epitope_Rep5 1174.51173072418 1174.5106299358602 91.796 2 0.12892376735563574 0.0009219175885842553 0.00491042628836677 ['ENST00000513080.5_1_17:47699309-47700178:-|nuORF', 'ENSG00000121067|ENST00000504102|SPOP', 'ENSG00000144228|ENST00000280098|SPOPL'] 106803 7028 [Acetylation]-SVAGGEIR True H1975_Epitope_Rep3 829.42938131551 829.42828993586 31.996 2 0.1289184679514479 0.0009219175885842553 0.004911023220606267 ['ENST00000565758.1_1_16:30441199-30441310:-|nuORF', 'ENSG00000179958|ENST00000319285|DCTPP1'] 125453 20423 VIVELIYKV True PC9_epitope_Rep2 1074.6688829885798 1074.6677899358601 83.984 2 0.12891818847285721 0.0009219175885842553 0.004911054703443376 ['ENSG00000129083|ENST00000439561|COPB1'] 84877 5657 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 26.789 2 0.12891487136533827 0.0009219175885842553 0.004911428385706072 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 6718 8790 AQAPDLQRV True PC9_epitope_Rep5 996.5352430500799 996.53414993586 38.753 2 0.128911339087215 0.0009219175885842553 0.0049118263383345065 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 21709 16310 ERSPLDQVL True PC9_epitope_Rep4 1055.56112344475 1055.56002993586 70.697 2 0.12890924666544568 0.0009219175885842553 0.004912062089184488 ['ENSG00000168994|ENST00000380283|PXDC1'] 99730 23009 SIIDEFLHI True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 93.998 2 0.12889852812011346 0.0009219175885842553 0.004913269910360376 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 8511 5296 ATSPVVYTR True NCI_RA007_Epitope_Rep4 992.52909504048 992.52798993586 26.923 2 0.12889552290069067 0.0009219175885842553 0.004913608606462967 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 71271 22212 LYPSIIQEF True PC9_epitope_Rep2 1108.580461907 1108.57936993586 90.918 2 0.12889308394170776 0.0009219175885842553 0.004913883500409103 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 40497 11867 HRDSGILGL True PC9_epitope_Rep2 966.5246783663799 966.52358993586 50.973 2 0.12889191817279108 0.0009219175885842553 0.004914014899030014 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 132238 17501 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 72.32 2 0.1288783633110166 0.0009219175885842553 0.004915542977072272 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 76795 16704 NRALPLEL True PC9_epitope_Rep2 924.53926580136 924.53816993586 69.5 2 0.12887699406502662 0.0009219175885842553 0.0049156973620426096 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 14619 15646 DVANKIGII True PC9_epitope_Rep4 941.5545815123298 941.55348993586 68.11 2 0.1288759349784464 0.0009219175885842553 0.004915816779247117 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 425 14047 AALNGLYRV True PC9_epitope_Rep2 975.55016483823 975.54906993586 59.312 2 0.1288735068408256 0.0009219175885842553 0.004916090574436973 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 128716 13216 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 55.843 2 0.12887263431087906 0.0009219175885842553 0.004916188963998399 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 111084 5912 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 28.134 2 0.12886751084037118 0.0009219175885842553 0.004916766743717012 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 44301 4725 ILDERHDNY True H1975_Epitope_Rep3 1173.54145062933 1173.5398049037901 23.301 3 0.1288669652542631 0.0009219175885842553 0.004916828274029876 ['nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENSG00000023287|ENST00000025008|RB1CC1', 'ENST00000522957.1_1_8:53536344-53555381:-|nuORF'] 68948 6950 LTPEELER True NCI_RA007_Epitope_Rep1 985.5080252427299 985.50692993586 31.038 2 0.12886423967972563 0.0009219175885842553 0.004917135671228612 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 132756 10428 VVINYSIVK True NCI_RA007_Epitope_Rep1 1033.6171817688898 1033.6160899358601 44.546 2 0.12885943416840312 0.0009219175885842553 0.004917677695001433 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 4801 8887 ALEAVFGK True H1975_Epitope_Rep3 833.4647038787699 833.46360993586 39.185 2 0.1288575457184232 0.0009219175885842553 0.0049178907133449095 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX', 'ENST00000565907.1_1_X:135961433-135961586:-|nuORF'] 40212 10892 HQGPATTVAF True PC9_epitope_Rep5 1027.50869394907 1027.50758993586 46.884 2 0.12885360249969133 0.0009219175885842553 0.004918335540149255 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 100090 20629 SISDVIAQV True PC9_epitope_Rep2 930.5022115863 930.50110993586 84.783 2 0.12885010716072823 0.0009219175885842553 0.004918729875591938 ['ENSG00000154122|ENST00000284268|ANKH'] 99319 13027 SHSNIIAGI True PC9_epitope_Rep5 910.4872302284999 910.48612993586 55.113 2 0.12884719485721235 0.0009219175885842553 0.004919058458170822 ['ENSG00000123983|ENST00000357430|ACSL3'] 94706 5895 RSDPGGGGLAY True H1975_Epitope_Rep2 1048.49377216092 1048.49266993586 27.661 2 0.1288433413822241 0.0009219175885842553 0.0049194932622225115 ['ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 117865 7991 TVYSGEEKL True PC9_epitope_Rep2 1024.5076908895599 1024.5065899358601 36.1 2 0.12884021544810426 0.0009219175885842553 0.0049198460024929185 ['ENSG00000166224|ENST00000373202|SGPL1'] 93518 7476 RQLDTETNL True PC9_epitope_Rep4 1088.5462016566 1088.5451099358602 36.114 2 0.12883725471628546 0.0009219175885842553 0.004920180123749234 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant'] 125828 18326 VLADALKSI True PC9_epitope_Rep3 928.5593325396001 928.55822993586 75.7 2 0.12883424164618493 0.0009219175885842553 0.004920520174336847 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 3905 16909 AHDDAIWSV True PC9_epitope_Rep5 1012.46140940348 1012.46030993586 70.055 2 0.12882753419821422 0.0009219175885842553 0.004921277249879715 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 96178 8114 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.5550749037902 37.997 3 0.12882034052324412 0.0009219175885842553 0.004922089333593928 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 60579 16742 LHGNIITSL True PC9_epitope_Rep1 966.54983048506 966.54872993586 69.226 2 0.12881044534128266 0.0009219175885842553 0.004923206601883992 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 93480 9642 RQINQFDL True NCI_RA007_Epitope_Rep4 1032.5352430500798 1032.5341499358601 43.941 2 0.12880827909232004 0.0009219175885842553 0.004923451227047605 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000572932.1_1_16:16374097-16382502:+|nuORF'] 40259 19532 HQLALISQL True PC9_epitope_Rep3 1021.59202965021 1021.59092993586 80.361 2 0.12879714796450567 0.0009219175885842553 0.00492470840587709 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 24126 17659 EYPELRGVF True PC9_epitope_Rep6 1108.5553097883198 1108.5542099358602 80.564 2 0.12879565203830645 0.0009219175885842553 0.004924877383773821 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 141357 5314 YTDVSTRY True H1975_Epitope_Rep3 1003.46107505031 1003.46057496793 25.516 1 0.1287908971867912 0.0009219175885842553 0.004925414523539669 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 109609 9175 TEAEDMISA True H1975_Epitope_Rep3 965.4011772156899 965.40006993586 40.282 2 0.12879056274670836 0.0009219175885842553 0.004925452306292219 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 96349 18460 RYSTGLAGNLL True PC9_epitope_Rep3 1163.6298717109098 1163.6287699358602 76.209 2 0.12878768753068617 0.0009219175885842553 0.0049257771402856565 ['ENSG00000168802|ENST00000448552|CHTF8'] 138751 8995 YISKPENL True PC9_epitope_Rep5 962.50729696674 962.50618993586 39.545 2 0.12878698574565164 0.0009219175885842553 0.004925856429225832 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 26369 9477 FHTTPNTSL True PC9_epitope_Rep1 1016.49270953176 1016.49160993586 41.311 2 0.1287800297778719 0.0009219175885842553 0.004926642394895733 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 62965 14514 LLPHVVPGTT True PC9_epitope_Rep3 1032.59678067748 1032.59568993586 60.949 2 0.12877762855425084 0.0009219175885842553 0.004926913741536538 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 134414 21605 VYPGYYLTF True PC9_epitope_Rep4 1121.54334812229 1121.5422499358601 91.29 2 0.12877518155790627 0.0009219175885842553 0.004927190275773425 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 114506 11281 TQAEQTLNV True PC9_epitope_Rep5 1002.49818883502 1002.49708993586 48.385 2 0.12877455220716252 0.0009219175885842553 0.004927261400957502 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 88542 8764 QTATTTMVY True H1975_Epitope_Rep3 1014.4691972058599 1014.46808993586 38.717 2 0.12876817660179252 0.0009219175885842553 0.004927981987901116 ['ENSG00000198218|ENST00000395443|QRICH1'] 76526 19301 NQINGSFAL True PC9_epitope_Rep5 962.48214484806 962.48104993586 79.287 2 0.12876606349538144 0.0009219175885842553 0.004928220839362093 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 85447 8237 QEYSEFVKA True NCI_RA007_Epitope_Rep4 1099.5185899264297 1099.51748993586 38.479 2 0.12876346077298637 0.0009219175885842553 0.00492851504939541 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 93068 13021 RPNDIMAEV True PC9_epitope_Rep2 1043.50697969691 1043.50588993586 55.366 2 0.12874897305558355 0.0009219175885842553 0.004930153047134651 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 61401 13038 LITPAVVSER True PC9_epitope_Rep3 1083.62880908175 1083.6277099358601 55.177 2 0.12874620237471454 0.0009219175885842553 0.004930466364422048 ['ENSG00000118181|ENST00000527673|RPS25'] 77386 9388 NSEPETLEY True H1975_Epitope_Rep3 1080.46113461996 1080.46057496793 41.111 1 0.12874422335602778 0.0009219175885842553 0.004930690170052411 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 99101 11305 SHHENLVSF True PC9_epitope_Rep3 1068.49885754136 1068.49776993586 48.49 2 0.1287332113553206 0.0009219175885842553 0.004931935690800399 ['ENSG00000128791|ENST00000262120|TWSG1'] 118521 15118 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.52387496793 66.079 1 0.12873230255460602 0.0009219175885842553 0.004932038495217449 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 86068 21089 QHSIPVFIF True PC9_epitope_Rep2 1086.58621599378 1086.5851099358601 86.576 2 0.12872065023709306 0.0009219175885842553 0.004933356803382111 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 40773 15411 HRTVLNQIL True PC9_epitope_Rep5 1092.64037682496 1092.63926993586 64.287 2 0.12871395173336517 0.0009219175885842553 0.004934114808787927 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 7905 9313 ATALEYVYK True NCI_RA007_Epitope_Rep4 1056.54916177872 1056.5480699358602 42.679 2 0.12871180717507488 0.0009219175885842553 0.004934357512076291 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 9225 13566 AVNPKFLAV True PC9_epitope_Rep6 957.5647522732099 957.56364993586 63.917 2 0.12870962201382288 0.0009219175885842553 0.004934604822544604 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 46620 8848 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51200993586 39.001 2 0.12870734362820954 0.0009219175885842553 0.004934862696865608 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 133871 14539 VYGSFASKL True PC9_epitope_Rep1 970.5123823471799 970.51128993586 60.748 2 0.12870261831641722 0.000961153384060873 0.00493539756365927 ['ENSG00000155096|ENST00000337198|AZIN1'] 128862 5504 VQDNPRAL True PC9_epitope_Rep1 911.4824792012299 911.48138993586 26.001 2 0.12869820297917486 0.000961153384060873 0.004935897395374898 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89'] 95355 14406 RVVDLLNQA True PC9_epitope_Rep2 1026.5821932425 1026.58108993586 60.678 2 0.12868625401153513 0.000961153384060873 0.004937250310191791 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 29276 6590 FVALSTNTTK True H1975_Epitope_Rep3 1080.58152453616 1080.5804299358601 30.302 2 0.12867967529080904 0.000961153384060873 0.0049379953375983535 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI'] 26797 21445 FLADPSAFVAA True PC9_epitope_Rep2 1107.5600608155898 1107.5589699358602 87.961 2 0.1286752822243193 0.000961153384060873 0.004938492905440086 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 17320 18311 EHALLAYTL True PC9_epitope_Rep4 1029.5494961318898 1029.54838993586 78.501 2 0.1286734078610848 0.000961153384060873 0.0049387052147192145 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 135073 6253 WEDDKVTEA True H1975_Epitope_Rep2 1091.4771190372699 1091.47657496793 29.006 1 0.12866501888868626 0.000961153384060873 0.00493965554429197 ['ENSG00000144224|ENST00000272638|UBXN4'] 94946 13326 RTITVGVYEA True PC9_epitope_Rep5 1107.5924235730297 1107.5913299358601 56.271 2 0.12865961363558306 0.000961153384060873 0.004940267963865054 ['ENSG00000116717|ENST00000370986|GADD45A', 'ENST00000460575.1_1_1:68151090-68151810:+|nuORF'] 36031 6018 GTYVSSVPR True NCI_RA007_Epitope_Rep2 964.4977949121999 964.49668993586 28.018 2 0.12865390230681423 0.000961153384060873 0.004940915143175884 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 130653 9762 VSTEVDARL True PC9_epitope_Rep2 988.5189242795998 988.51782993586 42.888 2 0.1286525737365249 0.000961153384060873 0.004941065702090007 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 76676 16859 NQSEKIFSL True PC9_epitope_Rep3 1064.55022440788 1064.54912993586 70.001 2 0.128647017402233 0.000961153384060873 0.004941695417061951 ['ENSG00000130818|ENST00000253115|ZNF426'] 46573 5494 ITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1047.56343232431 1047.5623299358601 25.441 2 0.1286454438112454 0.000961153384060873 0.0049418737708861364 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 2762 11502 AETLSSWEA True H1975_Epitope_Rep2 992.445090633 992.44454496793 49.3 1 0.12863077734630274 0.000961153384060873 0.004943536400611574 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant', 'LTN1|p.L617Ffs*33|1|0.19|ENSG00000198862|chr21:28966643-28966643|A/-|frameshift_variant'] 35567 10419 GSYDPQQIFK True NCI_RA007_Epitope_Rep5 1181.57168812845 1181.5705899358602 46.704 2 0.12862450684935048 0.000961153384060873 0.0049442474087550625 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 74230 7157 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.4288949679301 32.463 1 0.1286174647161184 0.000961153384060873 0.00494504603217009 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 97570 7679 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43308993586 34.503 2 0.12861616260264633 0.000961153384060873 0.004945193714145449 ['nc|ENSG00000128951|P33316-2|DUT'] 109607 9188 TEAEDMISA True H1975_Epitope_Rep2 965.4011772156899 965.4006249679301 40.294 1 0.12861141337538096 0.000961153384060873 0.004945732394632825 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 54566 2611 KYISKPENL True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 14.702 2 0.12861046293244358 0.000961153384060873 0.004945840205427886 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 39857 8512 HPADSVVSV True PC9_epitope_Rep5 909.4555957470501 909.45448993586 37.683 2 0.1286070811841833 0.000961153384060873 0.004946223823174025 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 35169 17323 GQWYGPNTV True PC9_epitope_Rep5 1020.4664947839199 1020.46538993586 71.632 2 0.12860532872240035 0.000961153384060873 0.004946422629916856 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 98345 6756 SEYIHAQVA True NCI_RA007_Epitope_Rep1 1016.4927095317598 1016.49160993586 30.288 2 0.12859074538513304 0.000961153384060873 0.0049480773306728645 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 34841 17782 GQISEVVVV True PC9_epitope_Rep4 928.5229470308799 928.52184993586 76.427 2 0.12858372756707123 0.000961153384060873 0.004948873802501747 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 4026 20159 AHFPINVVI True PC9_epitope_Rep2 1008.5756513100799 1008.57507496793 82.955 1 0.12858325051698755 0.0009763336717956729 0.00494892794882716 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 32802 15328 GHFPSPIRL True PC9_epitope_Rep5 1022.5661492555399 1022.56504993586 63.97 2 0.12858294819955235 0.0009763336717956729 0.004948962262880598 ['ENSG00000062822|ENST00000440232|POLD1'] 138080 20140 YGFPSPIFL True H1975_Epitope_Rep3 1039.5378688190299 1039.53727496793 84.26 1 0.12857940857908678 0.0009763336717956729 0.0049493640392021185 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 105027 11954 SRDLSSQLL True PC9_epitope_Rep6 1017.54547338061 1017.54436993586 57.233 2 0.12857111341344196 0.0009763336717956729 0.004950305735043165 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 90154 7405 REDENLQVP True H1975_Epitope_Rep3 1098.53055159246 1098.5294499358602 33.461 2 0.1285674723374103 0.0009763336717956729 0.0049507191381932426 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF', 'MTMR3|p.C235Qfs*20|1|0.17|ENSG00000100330|chr22:30007143-30007152|GCTGTGGACA/-|frameshift_variant'] 6351 4877 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 24.126 2 0.12856699315726164 0.0009763336717956729 0.004950773546226322 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 48189 21160 IYPSPTGVLI True PC9_epitope_Rep2 1058.60119735158 1058.60067496793 86.845 1 0.12855334459534695 0.0009763336717956729 0.00495232350546916 ['ENSG00000174231|ENST00000304992|PRPF8'] 20119 8584 EM[Oxidation]TADVIELK True H1975_Epitope_Rep1 1163.5743909308298 1163.5732899358602 37.946 2 0.12854517771644672 0.0009763336717956729 0.004953251181453889 ['ENSG00000067704|ENST00000366922|IARS2'] 28529 12215 FSEGGERLL True PC9_epitope_Rep4 1006.5083595959 1006.50726993586 54.804 2 0.1285394432177267 0.0009763336717956729 0.0049539026654064535 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 106565 5330 STMSTNGIPR True NCI_RA007_Epitope_Rep3 1062.51279335334 1062.5116899358602 27.974 2 0.12851892845623375 0.0009763336717956729 0.004956233992761322 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 72952 8944 MQDESSQTSL True PC9_epitope_Rep1 1124.4655683774001 1124.46446993586 39.245 2 0.12851627986612296 0.0009763336717956729 0.004956535061004005 ['ENSG00000101966|ENST00000371199|XIAP'] 3914 10527 AHDDGRWSL True PC9_epitope_Rep3 1055.47845644995 1055.47734993586 45.432 2 0.1285161800021077 0.0009763336717956729 0.004956546413011655 ['ENSG00000075618|ENST00000382361|FSCN1'] 88170 16676 QRVPLSVQL True PC9_epitope_Rep1 1038.61857875122 1038.61748993586 68.973 2 0.12850682000420366 0.0009763336717956729 0.00495761052103923 ['ENSG00000125826|ENST00000356286|RBCK1'] 87976 15439 QRMTTQLLL True PC9_epitope_Rep4 1102.6168644990598 1102.61576993586 67.319 2 0.12850673204093185 0.0009763336717956729 0.0049576205223656016 ['ENSG00000110195|ENST00000393676|FOLR1'] 69566 16701 LVDEWLDSY True H1975_Epitope_Rep1 1138.51825557326 1138.51714993586 69.636 2 0.1285004525006197 0.0009763336717956729 0.00495833455038346 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 118003 11533 TYDYNFHSF True NCI_RA007_Epitope_Rep3 1192.48253877088 1192.4814499358602 52.493 2 0.12849958042729076 0.0009763336717956729 0.004958433719265912 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 41556 20793 HYSPIYLSF True PC9_epitope_Rep3 1125.5494961318898 1125.54838993586 85.251 2 0.12849254572891267 0.0009763336717956729 0.004959233749883038 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 77322 13282 NSDVSLLNY True H1975_Epitope_Rep1 1023.48728979815 1023.4861899358599 56.19 2 0.12849079043379047 0.0009763336717956729 0.004959433392984266 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 6179 8611 APNLQNQQV True PC9_epitope_Rep4 1010.5145076055 1010.51340993586 40.603 2 0.12848710415443063 0.0009763336717956729 0.004959852687370469 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 47939 13873 IYIKQIKTF True PC9_epitope_Rep5 1152.6906810623198 1152.6890249037901 58.382 3 0.1284851998463297 0.0009763336717956729 0.00496006930579314 ['ENSG00000103479|ENST00000262133|RBL2'] 98994 5656 SHDHGYTTL True PC9_epitope_Rep1 1029.45157299577 1029.4504699358602 26.579 2 0.12847945608243036 0.0009763336717956729 0.004960722725454768 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 137602 7929 YEETSGVSV True H1975_Epitope_Rep2 969.4291062156899 969.42855496793 35.444 1 0.12847473381752467 0.0009763336717956729 0.0049612600011627915 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 106763 9337 STYTPENLLNK True NCI_RA007_Epitope_Rep3 1278.6455813446998 1278.64448993586 43.822 2 0.1284706219780988 0.0009763336717956729 0.004961727872301575 ['ENSG00000168672|ENST00000304916|LRATD2'] 32006 5815 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 27.391 1 0.12845884531731494 0.0009763336717956729 0.00496306813541089 ['ENSG00000108344|ENST00000264639|PSMD3'] 74790 9085 NHDTALTL True PC9_epitope_Rep4 883.43994568291 883.43884993586 42.532 2 0.12845633508589605 0.0009763336717956729 0.004963353862622738 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 38416 10631 HENIIVAIA True H1975_Epitope_Rep3 978.5498304850599 978.54872993586 45.964 2 0.12845456899142405 0.0009763336717956729 0.004963554898101824 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 21706 17663 ERSPLDQVL True PC9_epitope_Rep1 1055.56112344475 1055.56002993586 72.735 2 0.12845027693983269 0.0009763336717956729 0.004964043497998604 ['ENSG00000168994|ENST00000380283|PXDC1'] 135139 12265 WEIENNPTV True H1975_Epitope_Rep3 1100.51383889916 1100.51274993586 52.355 2 0.12844905188925548 0.0009763336717956729 0.00496418296435872 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 69256 11517 LTTEVHPEL True PC9_epitope_Rep4 1037.5393253710097 1037.53822993586 52.063 2 0.12844899869980717 0.0009763336717956729 0.004964189019819437 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3', 'ERGIC3|p.Y48C|1|0.27|ENSG00000125991|chr20:35542377-35542377|A/G|missense_variant'] 103893 17039 SQADVIPAV True PC9_epitope_Rep5 898.4759968384599 898.47488993586 70.559 2 0.12844538075619094 0.0009763336717956729 0.004964600929000766 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 40149 13603 HQDLSTPVL True PC9_epitope_Rep1 1008.52400966004 1008.52290993586 57.18 2 0.12843815709060596 0.0009763336717956729 0.004965423456426794 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 115288 17471 TRFAEVECL True PC9_epitope_Rep5 1066.5117307241799 1066.5106299358602 72.205 2 0.128432979303998 0.0009763336717956729 0.004966013110925417 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 117312 6729 TVNDLPVGR True NCI_RA007_Epitope_Rep1 969.5243440132099 969.52324993586 30.185 2 0.128425661579361 0.0009763336717956729 0.004966846582331143 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 70280 6850 LVRPPTEQA True PC9_epitope_Rep5 1009.55564414149 1009.55454993586 31.319 2 0.12842536691361808 0.0009763336717956729 0.004966880146937421 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 85974 21499 QHIPTPLFVL True PC9_epitope_Rep1 1163.6702799709099 1163.66918993586 87.54 2 0.1284110404280511 0.0009763336717956729 0.004968512308535283 ['ENSG00000008838|ENST00000394128|MED24', 'nc|ENSG00000008838|O75448-2|MED24'] 108897 8813 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.53816993586 38.906 2 0.12840911893791118 0.0009763336717956729 0.004968731256639614 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 115663 15500 TRYIAPTVL True PC9_epitope_Rep1 1032.5967806774797 1032.59568993586 64.443 2 0.12840501429692586 0.0009763336717956729 0.004969199000081826 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 84411 15533 QADLINELY True H1975_Epitope_Rep2 1077.53423999057 1077.5331499358601 64.902 2 0.1284007773439253 0.0009763336717956729 0.00496968186651096 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 134297 21991 VYNPVIYVF True PC9_epitope_Rep4 1112.5906326678798 1112.5895299358601 92.809 2 0.12840025225152185 0.0009763336717956729 0.004969741712136875 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 139967 21391 YQDEVFGGF True PC9_epitope_Rep5 1060.4501760134397 1060.44967496793 87.342 1 0.12839612328229058 0.0009763336717956729 0.004970212322090513 ['ENSG00000145907|ENST00000356245|G3BP1'] 129258 22990 VQVEDIVFL True PC9_epitope_Rep5 1060.580461907 1060.57936993586 93.422 2 0.12839151729401854 0.0009763336717956729 0.004970737353216537 ['ENSG00000197780|ENST00000338366|TAF13'] 111913 13228 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 62.535 2 0.1283871720173174 0.0009763336717956729 0.00497123271611968 ['ENSG00000213719|ENST00000375784|CLIC1'] 8481 5973 ATQVAVSVPK True NCI_RA007_Epitope_Rep5 998.5760452328999 998.57494993586 29.659 2 0.1283752498744435 0.0009763336717956729 0.004972592093380166 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 48074 21197 IYM[Oxidation]DTLNIF True PC9_epitope_Rep4 1144.547447907 1144.54634993586 89.699 2 0.1283752305493444 0.0009763336717956729 0.004972594297148117 ['ENSG00000165678|ENST00000372134|GHITM'] 76627 19755 NQQLPIESQMV True PC9_epitope_Rep3 1285.63363676201 1285.63252993586 81.215 2 0.12836988960594198 0.0009763336717956729 0.004973203396799272 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 7868 12398 ATADYICKV True PC9_epitope_Rep2 982.4793679667399 982.47826993586 52.998 2 0.12836795201263118 0.0009763336717956729 0.00497342438476881 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 30216 18694 FYSNIQTVI True PC9_epitope_Rep6 1083.5600608155898 1083.5589699358602 84.549 2 0.12836089236012546 0.0009763336717956729 0.004974229639664207 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 74593 21639 NGFPVFATV True PC9_epitope_Rep2 950.48616759934 950.48506993586 88.709 2 0.12835781380404848 0.0009763336717956729 0.004974580833388353 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 17450 16497 EHEDVIQIV True PC9_epitope_Rep5 1080.54513902744 1080.5440499358601 68.454 2 0.12835757432236652 0.0009763336717956729 0.004974608153861704 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF', 'ENST00000497744.1_1_17:18007908-18010551:+|nuORF'] 42400 7402 IEDGKAVIP True H1975_Epitope_Rep3 940.5229470308799 940.52184993586 33.451 2 0.12835471859629313 0.0009763336717956729 0.0049749339512649236 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK'] 30164 18553 FYPPKVELF True PC9_epitope_Rep6 1138.60628273202 1138.6051899358602 84.003 2 0.12835371842716278 0.0009763336717956729 0.004975048061182869 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 54813 8440 KYPDRVPVI True NCI_RA007_Epitope_Rep4 1085.62332977849 1085.62222993586 39.281 2 0.12835095074651148 0.0009763336717956729 0.004975363840999962 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 96223 20130 RYPTSIASLAF True PC9_epitope_Rep2 1224.65027280232 1224.64916993586 82.841 2 0.12834334200816 0.0009763336717956729 0.0049762320650978 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 2654 7623 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.4597949679301 34.275 1 0.12834243070712448 0.0009763336717956729 0.004976336062563383 ['ENSG00000038219|ENST00000040738|BOD1L1'] 52484 6663 KKVPVSVNL True NCI_RA007_Epitope_Rep4 982.61751612206 982.61640993586 32.252 2 0.12834102156515564 0.0009763336717956729 0.004976496877728332 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 99408 2551 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 14.724 2 0.12833600286882624 0.0009763336717956729 0.0049770696666821485 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 21719 12498 ERSPVIQTL True PC9_epitope_Rep3 1041.58185888933 1041.5807699358602 53.099 2 0.12833467132809942 0.0009763336717956729 0.004977221647667165 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 9205 19372 AVMKQFAFV True PC9_epitope_Rep5 1039.5524733373497 1039.55136993586 79.561 2 0.12833372180998492 0.0009763336717956729 0.004977330027685674 ['nc|ENSG00000239306|Q96PK6-5|RBM14', 'nc|ENSG00000239306|Q96PK6-3|RBM14', 'nc|ENSG00000239306|Q96PK6-4|RBM14', 'ENST00000511114.1_1_11:66384104-66406046:+|nuORF', 'nc|ENSG00000239306|Q96PK6-2|RBM14', 'ENST00000512283.1_1_11:66384104-66384788:+|nuORF', 'ENSG00000239306|ENST00000310137|RBM14'] 77662 8187 NTIDPSHPM True PC9_epitope_Rep2 1010.4491304676201 1010.44802993586 36.848 2 0.12832555388320976 0.0009763336717956729 0.004978262428046702 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 17266 14647 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 61.606 2 0.128318313553797 0.0009763336717956729 0.004979089083141188 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 131435 12309 VTIKELDLY True H1975_Epitope_Rep2 1092.60667665484 1092.60556993586 52.43 2 0.12831250156822105 0.0009763336717956729 0.004979752756583562 ['nc|ENSG00000008441|Q14938-6|NFIX', 'nc|ENSG00000008441|Q14938-5|NFIX', 'nc|ENSG00000008441|Q14938-3|NFIX', 'nc|ENSG00000008441|Q14938-2|NFIX', 'nc|ENSG00000008441|Q14938-4|NFIX', 'ENSG00000008441|ENST00000592199|NFIX'] 111887 15370 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 63.938 2 0.12831195322033986 0.0009763336717956729 0.0049798153771821 ['ENSG00000213719|ENST00000375784|CLIC1'] 27467 15501 FMDPASALY True H1975_Epitope_Rep1 1013.45281886573 1013.4522749679301 64.898 1 0.12831190301610024 0.0009763336717956729 0.004979821110478147 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 95149 4219 RVFTGVVTK True NCI_RA007_Epitope_Rep3 1005.5971150306499 1005.59600993586 23.255 2 0.12830904174203436 0.0009763336717956729 0.004980147877097138 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1', 'CCAR1|p.T1062Ifs*11|1|0.15|ENSG00000060339|chr10:68788325-68788326|-/TATAC|frameshift_variant'] 858 9230 ADEGISFR True PC9_epitope_Rep2 893.42429561877 893.42318993586 40.843 2 0.12830818655986023 0.0009763336717956729 0.004980245545718476 ['ENSG00000117450|ENST00000319248|PRDX1'] 97590 7919 SEETPLTAA True H1975_Epitope_Rep3 917.4341915961298 917.43308993586 35.43 2 0.1283075066079006 0.0009763336717956729 0.004980323202996121 ['ENSG00000182154|ENST00000371443|MRPL41'] 125456 15433 VIVEPLEQL True NCI_RA007_Epitope_Rep4 1038.5961119711399 1038.5950099358602 67.032 2 0.12830157454750388 0.0009763336717956729 0.004981000753794992 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 75284 20159 NIIPRFVQV True PC9_epitope_Rep3 1084.6393141958001 1084.63820993586 82.796 2 0.12829344054173755 0.0009763336717956729 0.004981929954702782 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 136853 13249 YADPGVSFY True H1975_Epitope_Rep3 1017.44436235701 1017.44377496793 56.218 1 0.12829139402623388 0.0009763336717956729 0.004982163768438074 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 96618 13527 SAHLFEVEL True NCI_RA007_Epitope_Rep3 1043.52876068731 1043.52766993586 60.498 2 0.12828812852063068 0.0009763336717956729 0.004982536873735843 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 107229 20405 SVITQVFHV True PC9_epitope_Rep3 1028.5654805492 1028.5643899358602 83.741 2 0.12828743081398153 0.0009763336717956729 0.004982616594828649 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant'] 43366 6961 IGAEVYHNLK True PC9_epitope_Rep4 1142.60840799034 1142.6067749037902 34.014 3 0.1282864264968014 0.0009763336717956729 0.004982731351939141 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 105037 11645 SRDPHTEFTL True PC9_epitope_Rep1 1201.57275075761 1201.57111490379 49.671 3 0.12828362986769232 0.0009763336717956729 0.0049830509191345195 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 29388 16611 FVDPNGKISL True PC9_epitope_Rep1 1088.5866099165999 1088.58550993586 68.72 2 0.12828059527957636 0.0009763336717956729 0.004983397700388461 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 29442 22353 FVEETVYLL True PC9_epitope_Rep5 1111.58012755383 1111.57902993586 90.99 2 0.1282760600692856 0.0009763336717956729 0.0049839160112881385 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 47086 21509 ITTDVLYTI True PC9_epitope_Rep5 1037.5644774896898 1037.5639749679299 87.769 1 0.12827482201750057 0.0009763336717956729 0.004984057512442063 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 36687 13771 GVISFAVWK True NCI_RA007_Epitope_Rep3 1005.5647522732099 1005.56364993586 61.496 2 0.12826399677357114 0.0009763336717956729 0.004985294934659893 ['ENSG00000215712|ENST00000400788|TMEM242'] 67410 7246 LSSPATLNSR True PC9_epitope_Rep3 1044.5563724174801 1044.55526993586 32.883 2 0.12826260443884846 0.0009763336717956729 0.004985454112890282 ['CON__P00761'] 97959 10856 SENPSVYVP True NCI_RA007_Epitope_Rep2 990.4658260775799 990.4652749679301 46.832 1 0.1282608063617368 0.0009763336717956729 0.00498565968488365 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 77325 13515 NSDVSLLNY True H1975_Epitope_Rep2 1023.48728979815 1023.48677496793 57.12 1 0.12826062286359652 0.0009763336717956729 0.004985680664473838 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 24326 11193 EYVKQTWNL True NCI_RA007_Epitope_Rep1 1179.59242357303 1179.5913299358601 47.538 2 0.1282587505990405 0.0009763336717956729 0.0049858947279686275 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 24243 5156 EYSKQMQRF True PC9_epitope_Rep6 1215.57064258263 1215.56899490379 27.567 3 0.12825817671236028 0.0009763336717956729 0.004985960344536976 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 98226 4554 SETVMVHQA True NCI_RA007_Epitope_Rep4 1000.4647805317599 1000.46368993586 23.92 2 0.12825761722206752 0.0009763336717956729 0.004986024315880524 ['ENSG00000100647|ENST00000342745|SUSD6'] 71026 15065 LYIVEPLKF True NCI_RA007_Epitope_Rep3 1120.6532329244399 1120.65212993586 66.733 2 0.1282537869176005 0.0009763336717956729 0.004986462289245144 ['ENSG00000094975|ENST00000263688|SUCO', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 35863 5951 GTMKAQGVLLK True NCI_RA007_Epitope_Rep4 1144.6638146914797 1144.66216490379 29.51 3 0.12825110944670637 0.0009763336717956729 0.00498676846515289 ['nc|ENSG00000166482|P55083-2|MFAP4'] 105073 14352 SRDQTVLGL True PC9_epitope_Rep1 987.5349086969098 987.53380993586 60.029 2 0.12824614836620005 0.0009763336717956729 0.004987335826725938 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1'] 89692 11274 RAAEEFVNV True PC9_epitope_Rep4 1033.5192586327698 1033.5181699358602 51.141 2 0.12824176163225526 0.0009763336717956729 0.004987837557445087 ['ENSG00000132661|ENST00000254998|NXT1'] 48448 18977 IYYVDVQKF True PC9_epitope_Rep2 1173.6070110080097 1173.6059099358602 78.361 2 0.12824171448871938 0.0009763336717956729 0.004987842949735213 ['ENSG00000160410|ENST00000291842|SHKBP1'] 53011 10164 KPIEELQNV True PC9_epitope_Rep4 1068.58152453616 1068.5804299358601 46.772 2 0.1282285551629542 0.0009763336717956729 0.004989348340951288 ['ENSG00000166920|ENST00000396650|C15orf48'] 3520 9993 AGLQFPVGR True NCI_RA007_Epitope_Rep4 943.5239500903898 943.52284993586 45.283 2 0.12822589852121738 0.0009763336717956729 0.0049896523077433905 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 53057 11210 KPNPNQIISV True PC9_epitope_Rep4 1108.62405805448 1108.62296993586 50.895 2 0.12821737488110352 0.0009763336717956729 0.0049906276857875275 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 53673 7707 KSDTQNLLY True H1975_Epitope_Rep2 1080.54513902744 1080.5440499358601 34.599 2 0.12821590325915416 0.0009763336717956729 0.004990796105548956 ['ENSG00000012232|ENST00000220562|EXTL3'] 134751 13305 VYTSVVEEL True NCI_RA007_Epitope_Rep3 1037.5280919809697 1037.52698993586 59.602 2 0.12820925766519778 0.0009763336717956729 0.00499155673007118 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 44417 6011 ILGPGLNK True NCI_RA007_Epitope_Rep5 810.4963383602201 810.49524993586 29.805 2 0.12820763234960955 0.0009763336717956729 0.004991742773656949 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 132525 10982 VVDPNDPQM True PC9_epitope_Rep3 1013.44879611445 1013.44768993586 47.228 2 0.1281999534740361 0.0009763336717956729 0.004992621836998488 ['ENSG00000151883|ENST00000281631|PARP8'] 71846 14939 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51487496793 62.701 1 0.1281925620584032 0.0009763336717956729 0.00499346813618202 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 3951 14533 AHDGSVFTL True PC9_epitope_Rep4 945.4555957470501 945.45448993586 63.816 2 0.1281863289494557 0.0009763336717956729 0.004994181921642965 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'EML4-ALK|7|fusion', 'EML4-ALK|6|fusion'] 74595 21797 NGFPVFATV True PC9_epitope_Rep3 950.48616759934 950.48506993586 89.14 2 0.1281853280857645 0.0009763336717956729 0.004994296545051417 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 8779 17973 AVDLTLPKV True PC9_epitope_Rep4 954.57498260374 954.57388993586 77.186 2 0.12818353057593876 0.0009763336717956729 0.004994502410447909 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 142524 15529 YYITGNLETF True NCI_RA007_Epitope_Rep3 1219.57610480255 1219.5750099358602 68.644 2 0.12818251816030016 0.0009763336717956729 0.004994618364165572 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 48136 20519 IYPEVVHMF True PC9_epitope_Rep3 1133.5579526406098 1133.55684993586 84.187 2 0.12817404390921466 0.0009763336717956729 0.004995589038597585 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 46986 6923 ITQGTPLKY True H1975_Epitope_Rep3 1019.5651461960299 1019.56404993586 31.59 2 0.12817359277824503 0.0009763336717956729 0.004995640718131276 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 46687 10908 ITDSFNATY True H1975_Epitope_Rep2 1030.46074069714 1030.46017496793 46.989 1 0.12816567171463822 0.0009763336717956729 0.004996548205147994 ['ENSG00000165934|ENST00000298875|CPSF2'] 46621 8792 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51257496793 38.782 1 0.12816513003538932 0.0009763336717956729 0.004996610269258479 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 103985 20334 SQATDFGEALV True PC9_epitope_Rep3 1136.5349682665599 1136.5338699358601 83.464 2 0.12816266858075342 0.0009763336717956729 0.00499689230546897 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 88275 14082 QSEIASMLY True H1975_Epitope_Rep1 1040.48484727 1040.4842749679299 59.333 1 0.1281573673447396 0.0009763336717956729 0.004997499780127702 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 136346 14719 WTEMNTIVY True H1975_Epitope_Rep1 1155.52704643515 1155.5259499358601 61.836 2 0.12815688069768116 0.0009763336717956729 0.004997555549204428 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 76683 21477 NQSELAVLL True PC9_epitope_Rep3 985.5444107514498 985.54330993586 87.903 2 0.1281502078497045 0.0009763336717956729 0.004998320310010329 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 73053 18285 MRDPIRILV True PC9_epitope_Rep5 1111.65358436095 1111.65248993586 75.348 2 0.12815009039839068 0.0009763336717956729 0.004998333771883738 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 93727 9081 RQYSVTDAL True NCI_RA007_Epitope_Rep5 1051.52982331647 1051.5287299358602 41.584 2 0.12814760550569337 0.0009763336717956729 0.004998618590255145 ['ENSG00000062725|ENST00000083182|APPBP2'] 35380 6630 GSDCTTIHY True H1975_Epitope_Rep2 995.4018459220301 995.40074993586 30.41 2 0.12814521267590273 0.0009763336717956729 0.004998892871453128 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.Y236C|2|0.45|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 65265 10596 LQTSIREEI True PC9_epitope_Rep6 1087.5873381925899 1087.58624993586 51.574 2 0.12814388333058646 0.0009763336717956729 0.004999045255764472 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 24486 7522 FAEHNDLQY True H1975_Epitope_Rep1 1135.4934378077498 1135.49287496793 33.931 1 0.1281428897992995 0.0009763336717956729 0.00499915914832661 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 127277 19506 VMAPRALLL True PC9_epitope_Rep1 982.5997578829398 982.59866993586 79.848 2 0.12814177477528563 0.0009763336717956729 0.0049992869711349645 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 78205 22705 NYFDEQFEF True PC9_epitope_Rep1 1237.4927691014097 1237.49166993586 92.138 2 0.12814123007371223 0.0009763336717956729 0.00499934941515965 ['ENSG00000162639|ENST00000651461|HENMT1'] 58072 9139 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 40.104 2 0.12814017640444855 0.0009763336717956729 0.004999470208889323 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 96651 8790 SAINEVVTR True PC9_epitope_Rep3 987.53490869691 987.53380993586 38.762 2 0.12813898756198722 0.0009763336717956729 0.004999606502457758 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 100967 19779 SLFPGKLEV True PC9_epitope_Rep5 988.5593325396 988.55822993586 81.125 2 0.1281380162552481 0.0009763336717956729 0.004999717859587362 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 140578 8326 YRQKQVVIL True PC9_epitope_Rep4 1145.6920780446499 1145.69044490379 39.484 3 0.1281375594759262 0.0009763336717956729 0.004999770228680128 ['ENSG00000143179|ENST00000367879|UCK2'] 64814 5279 LQDAEIAR True PC9_epitope_Rep2 914.4821448480599 914.48104993586 25.694 2 0.12813163572973205 0.0009763336717956729 0.005000449426500913 ['ENSG00000197956|ENST00000368719|S100A6'] 21127 5540 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 26.701 2 0.12811204598466353 0.0009763336717956729 0.0050026961699756786 ['ENSG00000092148|ENST00000399332|HECTD1'] 43029 4847 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 23.732 2 0.1281001350585234 0.0009763336717956729 0.005004062716408624 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 1432 14501 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48601496793 61.14 1 0.12809431425535486 0.0009763336717956729 0.005004730673475307 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 105113 12428 SREPSQVIF True PC9_epitope_Rep2 1061.5505587610498 1061.54946993586 53.112 2 0.12809062469045823 0.0009763336717956729 0.005005154109037675 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 47292 22999 IVDPFQILV True PC9_epitope_Rep4 1042.60628273202 1042.6051899358602 96.685 2 0.12808996826073138 0.0009763336717956729 0.005005229448355571 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 68048 11745 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48127496793 50.169 1 0.1280861832218579 0.0009763336717956729 0.005005663884072361 ['ENSG00000174231|ENST00000304992|PRPF8'] 28891 16875 FTDESYLELY True H1975_Epitope_Rep2 1278.5655996885 1278.5650749679298 70.155 1 0.1280810569862165 0.0009763336717956729 0.005006252317523926 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 10035 11982 AYSAKIALF True NCI_RA007_Epitope_Rep3 982.5487678558999 982.54766993586 54.252 2 0.12808001962683171 0.0009763336717956729 0.0050063714028336205 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 142527 21563 YYITGNLETF True PC9_epitope_Rep1 1219.57610480255 1219.5750099358602 87.764 2 0.12807938600813362 0.0009763336717956729 0.005006444141462785 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 4480 17870 AIVKEIVNI True PC9_epitope_Rep1 997.6171817688898 997.61608993586 73.531 2 0.12807921325074983 0.0009763336717956729 0.005006463973973239 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 100424 11704 SLAEGLRTV True PC9_epitope_Rep2 944.52909504048 944.52798993586 50.351 2 0.12807310797500512 0.0009763336717956729 0.005007164907897291 ['ENSG00000111331|ENST00000228928|OAS3', 'OAS3|p.G257C|1|0.08|ENSG00000111331|chr12:112946875-112946875|G/T|missense_variant'] 108206 17220 SYGSVFKAI True PC9_epitope_Rep5 970.5123823471799 970.51128993586 71.257 2 0.12807261448721705 0.0009763336717956729 0.005007221568409662 ['ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 139130 11939 YLDQM[Oxidation]EDLY True H1975_Epitope_Rep1 1204.4958062569601 1204.49470993586 50.927 2 0.12806252603999546 0.0009763336717956729 0.005008380026156388 ['ENSG00000198356|ENST00000357332|GET3'] 37590 12256 GVVPTIQKV True PC9_epitope_Rep2 939.5753169569098 939.57420993586 52.453 2 0.12806026353919092 0.0009763336717956729 0.005008639865585357 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 68082 12709 LTDLYSPEY True H1975_Epitope_Rep1 1099.50735653639 1099.50677496793 53.942 1 0.12805830688614664 0.0009763336717956729 0.00500886459027033 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 45852 8546 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 37.827 1 0.12805730297946225 0.0009763336717956729 0.005008979894381088 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 107544 15240 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 70.729 2 0.12805592974469587 0.0009763336717956729 0.005009137622043664 ['ENSG00000073756|ENST00000367468|PTGS2'] 46600 12253 ITDAYLDQY True H1975_Epitope_Rep2 1100.50260550912 1100.50207496793 52.213 1 0.1280526323800314 0.0009763336717956729 0.0050095163722801055 ['ENSG00000174231|ENST00000304992|PRPF8'] 717 11208 AAVFGVTRL True H1975_Epitope_Rep2 932.5443511817999 932.54324993586 48.152 2 0.12804001805211615 0.0009763336717956729 0.005010965570907765 ['ENSG00000065308|ENST00000182527|TRAM2'] 133797 13322 VYFPDQHINF True NCI_RA007_Epitope_Rep4 1278.6033226099 1278.6022299358601 58.393 2 0.12803537081090113 0.0009763336717956729 0.00501149957364058 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 54772 17803 KYNANFVTF True PC9_epitope_Rep5 1102.54474510462 1102.54364993586 73.499 2 0.12803475213004836 0.0009763336717956729 0.005011570668910587 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 3988 14133 AHDVDPIEL True PC9_epitope_Rep4 1007.4923751785899 1007.49126993586 62.266 2 0.12802627650562748 0.0009763336717956729 0.005012544739068929 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 25680 5212 FEQGGARVV True H1975_Epitope_Rep2 961.4981292653698 961.49702993586 25.116 2 0.12802466737199109 0.0009763336717956729 0.005012729691479286 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 9178 13172 AVLPQTRYV True PC9_epitope_Rep5 1045.59202965021 1045.59092993586 55.67 2 0.12801447865356697 0.0009763336717956729 0.005013900929532324 ['nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 97463 11974 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 51.139 2 0.12801086940163345 0.0009763336717956729 0.005014315893443129 ['ENSG00000135900|ENST00000258383|MRPL44'] 140335 11723 YRDNDSDLAL True PC9_epitope_Rep2 1180.53603089572 1180.5349299358602 50.426 2 0.12800790414701527 0.0009763336717956729 0.005014656840771539 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 77597 6514 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 29.97 2 0.1280075841335186 0.0009763336717956729 0.005014693637539277 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 62056 16961 LLDTELDLY True H1975_Epitope_Rep2 1093.55430672881 1093.5532099358602 70.485 2 0.12800609853507203 0.0009763336717956729 0.005014864462625331 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 115770 13162 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 55.723 1 0.12800504850903735 0.0009763336717956729 0.0050149852058266045 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 42003 21796 IDFPGGILSF True PC9_epitope_Rep6 1064.55424715916 1064.5531499358601 96.731 2 0.12799268741773953 0.0009763336717956729 0.005016406830844135 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 31333 12293 GDLPFVVPR True H1975_Epitope_Rep3 998.5549158654999 998.55380993586 52.464 2 0.12798758760319673 0.0009763336717956729 0.0050169934659707646 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 47701 18093 IYAPKLQEF True PC9_epitope_Rep3 1107.59644632431 1107.5953499358602 74.791 2 0.12798614903827418 0.0009763336717956729 0.005017158957260422 ['ENSG00000175305|ENST00000308108|CCNE2'] 34371 19629 GPFSQFIKA True PC9_epitope_Rep3 993.5283667644898 993.52726993586 80.74 2 0.12798443103744359 0.0009763336717956729 0.005017356601649107 ['ENSG00000075420|ENST00000415807|FNDC3B'] 77189 8469 NRSDPVTL True PC9_epitope_Rep5 900.46649478392 900.46538993586 37.519 2 0.12797903969404287 0.0009763336717956729 0.005017976888966115 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 78217 22868 NYGDYFNVF True PC9_epitope_Rep1 1137.47672511445 1137.47562993586 92.755 2 0.12797820982316724 0.0009763336717956729 0.005018072374343754 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 57809 5418 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.6020249037902 25.868 3 0.1279774707678056 0.0009763336717956729 0.005018157411943955 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 21770 15415 ERVPINDVL True PC9_epitope_Rep2 1053.58185888933 1053.5807699358602 64.573 2 0.12797736850668898 0.0009763336717956729 0.005018169178481113 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 65409 15809 LREPLPATL True PC9_epitope_Rep5 1008.59678067748 1008.59568993586 65.799 2 0.12796678825870708 0.0009763336717956729 0.005019386726947649 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 8061 11520 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 49.369 2 0.12796397349144323 0.0009763336717956729 0.005019710692209048 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 86223 19137 QILDGVHYL True PC9_epitope_Rep2 1056.5603951687601 1056.55928993586 78.98 2 0.1279584831272218 0.0009763336717956729 0.005020342664074984 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 128767 18428 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 75.674 2 0.12794919987340445 0.0009763336717956729 0.005021411396782705 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 109781 10325 TEDWDQPVA True H1975_Epitope_Rep3 1059.45090428943 1059.44980993586 44.767 2 0.1279444610344676 0.0009763336717956729 0.0050219570408434255 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 83306 7630 PTDPKVVVY True H1975_Epitope_Rep3 1016.5542471591598 1016.55314993586 34.331 2 0.127941607734689 0.0009763336717956729 0.005022285606399634 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 103275 12299 SPLLLQAKA True PC9_epitope_Rep5 939.5753169569099 939.57420993586 52.298 2 0.12794106232689476 0.0009763336717956729 0.005022348414057793 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 106837 15509 SVASELEKI True PC9_epitope_Rep4 974.5284263341399 974.5273299358599 67.58 2 0.1279344474638176 0.0009763336717956729 0.005023110224908422 ['ENSG00000172244|ENST00000306862|C5orf34'] 84898 5651 QEAVTRLEA True H1975_Epitope_Rep2 1015.5298233164699 1015.52872993586 26.734 2 0.12792801850508959 0.0009763336717956729 0.005023850734611787 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 11783 19712 DHDRFWVL True PC9_epitope_Rep2 1086.52467836638 1086.5235899358602 81.21 2 0.1279263635711297 0.0009763336717956729 0.005024041372990693 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 96504 8153 SADETWDSA True NCI_RA007_Epitope_Rep5 980.37231961556 980.37122993586 38.043 2 0.12792487965938812 0.0009763336717956729 0.005024212316689672 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 138494 14732 YHSEVPVSL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 61.804 2 0.12792399829911782 0.0009763336717956729 0.005024313850355925 ['ENSG00000115306|ENST00000356805|SPTBN1'] 2113 6832 AELIKTVAS True H1975_Epitope_Rep3 930.53859709502 930.53750993586 31.235 2 0.12792028622708104 0.0009763336717956729 0.005024741507241518 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 53895 9708 KTLTGKTITL True PC9_epitope_Rep5 1074.6648602373 1074.66376993586 42.31 2 0.12790744679058635 0.0009763336717956729 0.0050262209767539005 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 130111 6331 VSDPSSPQY True H1975_Epitope_Rep3 978.42944056886 978.42834993586 29.342 2 0.12790395515756425 0.0009763336717956729 0.005026623386554993 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 116934 17698 TVFTDHMLTV True PC9_epitope_Rep6 1162.5692456002998 1162.5681499358602 80.711 2 0.12790022627872416 0.0009763336717956729 0.005027053173834444 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 44328 9054 ILDNSPGAY True H1975_Epitope_Rep2 948.4552613938799 948.45471496793 39.78 1 0.12789757102280652 0.0009763336717956729 0.005027359238296538 ['ENSG00000175826|ENST00000574322|CTDNEP1'] 49262 8483 KEQIDIYEA True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 37.582 2 0.1278872406285479 0.0009763336717956729 0.005028550170259 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 17934 12587 EIAQEFKTDLR True PC9_epitope_Rep1 1348.6986795467199 1348.6970249037902 53.283 3 0.12788722340395103 0.0009763336717956729 0.005028552156215571 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 53136 11395 KPYESYIGA True PC9_epitope_Rep3 1026.5022115862998 1026.50110993586 48.834 2 0.12787933544165722 0.0009763336717956729 0.005029461701198606 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 29371 10298 FVDKNNDLLY True H1975_Epitope_Rep3 1239.61355294043 1239.61244993586 44.665 2 0.12787484890129153 0.0009763336717956729 0.00502997910721951 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 114483 6578 TPYKQEINA True PC9_epitope_Rep5 1062.53457434374 1062.53346993586 30.272 2 0.12787313272761985 0.0009763336717956729 0.005030177037153674 ['ENSG00000138356|ENST00000374700|AOX1'] 73046 18579 MRDPIRILV True PC9_epitope_Rep3 1111.65358436095 1111.65248993586 76.69 2 0.1278706957841762 0.0009763336717956729 0.005030458108137873 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 140743 10360 YSDDNFGNY True H1975_Epitope_Rep2 1093.39886871657 1093.3977699358602 44.858 2 0.12787013032979044 0.0009763336717956729 0.005030523328443573 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.A690Hfs*28|1|0.39|ENSG00000188177|chr2:112325177-112325177|G/-|frameshift_variant'] 71679 6652 MEDAKVYVA True H1975_Epitope_Rep2 1024.4899326504399 1024.4888299358602 30.494 2 0.1278684640275134 0.0009763336717956729 0.0050307155269284564 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 78403 22541 NYLLYVSNF True PC9_epitope_Rep5 1131.5600608155898 1131.5589699358602 91.709 2 0.12786622949151957 0.0009763336717956729 0.005030973279265218 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 108498 20297 SYMGHFDLL True PC9_epitope_Rep2 1081.49026700361 1081.48967496793 83.494 1 0.12786558477687548 0.0009763336717956729 0.005031047649110497 ['ENSG00000169976|ENST00000367569|SF3B5'] 110223 6789 TEQPVTPEP True H1975_Epitope_Rep3 996.47639076128 996.47528993586 31.069 2 0.1278636827056005 0.0009763336717956729 0.005031267065260271 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 45630 19836 IRDNFVIVY True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 81.115 2 0.12786329960570494 0.0009763336717956729 0.0050313112594337975 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 21865 11220 ESDEVELSY True H1975_Epitope_Rep2 1069.44515020265 1069.4445749679298 48.199 1 0.1278625417327722 0.0009763336717956729 0.005031398688323226 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 73078 18173 MREDVAEGLTL True PC9_epitope_Rep1 1232.6070876609997 1232.6059899358602 74.692 2 0.12785549989768 0.0009763336717956729 0.005032211112006514 ['ENST00000579248.5_2_18:47017953-47018809:-|nuORF'] 134141 20077 VYLDKFIRL True PC9_epitope_Rep5 1165.68593003505 1165.68427490379 82.276 3 0.12785022741585236 0.0009763336717956729 0.005032819487991387 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 107132 19241 SVIDHIHLI True PC9_epitope_Rep3 1045.59202965021 1045.59092993586 79.231 2 0.12783965827907787 0.0009763336717956729 0.005034039246881072 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 2390 10237 AEQDSWYQA True H1975_Epitope_Rep2 1096.4461532621601 1096.4450499358602 44.383 2 0.12783848869039605 0.0009763336717956729 0.005034174244173777 ['ENSG00000169047|ENST00000305123|IRS1'] 39848 19174 HPAAFPLPVV True PC9_epitope_Rep4 1046.59130137422 1046.59020993586 81.85 2 0.12783643487742136 0.0009763336717956729 0.0050344113097878845 ['ENSG00000108523|ENST00000262482|RNF167'] 109032 12452 TAIHNFPTV True PC9_epitope_Rep4 998.5185303567799 998.51742993586 55.704 2 0.12783266420739958 0.0009763336717956729 0.005034846575738366 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 93725 8737 RQYSVTDAL True NCI_RA007_Epitope_Rep3 1051.52982331647 1051.5287299358602 41.457 2 0.12781617678796736 0.0009763336717956729 0.0050367502295043595 ['ENSG00000062725|ENST00000083182|APPBP2'] 41409 18490 HYGLPVVV True PC9_epitope_Rep3 882.49633836022 882.49578496793 76.336 1 0.12781173195249865 0.0009763336717956729 0.005037263555629031 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 115047 12869 TRDAGYGGLSL True PC9_epitope_Rep6 1108.5512870370399 1108.55018993586 61.021 2 0.12781109534871982 0.0009763336717956729 0.0050373370800729945 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 62986 16692 LLPNHSYVF True PC9_epitope_Rep2 1088.5654805492 1088.5643899358602 69.453 2 0.12781081593630939 0.0009763336717956729 0.005037369351094271 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 12040 14662 DHSPDSLPL True PC9_epitope_Rep1 979.46107505031 979.45996993586 61.218 2 0.1278083479487488 0.0009763336717956729 0.00503765440265606 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 90841 6217 RETQNLQVP True NCI_RA007_Epitope_Rep3 1083.5672714543498 1083.5661699358602 31.461 2 0.12780335385969666 0.0009763336717956729 0.005038231266402261 ['ENSG00000170464|ENST00000302060|DNAJC18'] 29006 20398 FTEGELMSV True PC9_epitope_Rep3 1011.4582981689899 1011.45720993586 83.712 2 0.12780188248094787 0.0009763336717956729 0.0050384012367145434 ['STK11-HMHA1|1|fusion', 'STK11|p.L282Afs*3|2|0.54|ENSG00000118046|chr19:1221314-1221315|-/C|frameshift_variant', 'ENSG00000118046|ENST00000326873|STK11', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'STK11|p.D284Efs*5|1|0.57|ENSG00000118046|chr19:1221326-1221333|CTGACCTG/-|frameshift_variant', 'STK11|p.P281Rfs*6|1|0.7|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'STK11|p.N259Kfs*28|1|0.77|ENSG00000118046|chr19:1221255-1221255|C/-|frameshift_variant', 'STK11|p.T250Rfs*37|1|0.54|ENSG00000118046|chr19:1221227-1221227|C/-|frameshift_variant', 'STK11|p.D176Tfs*111|1|0.54|ENSG00000118046|chr19:1220433-1220433|G/-|frameshift_variant', 'STK11|p.H168Lfs*119|1|0.44|ENSG00000118046|chr19:1220411-1220411|A/-|frameshift_variant', 'STK11|p.E265Gfs*19|1|0.52|ENSG00000118046|chr19:1221271-1221280|GAGAACATCG/-|frameshift_variant', 'STK11|p.K44Sfs*7|1|0.24|ENSG00000118046|chr19:1207041-1207041|C/-|frameshift_variant', 'STK11|p.D30Gfs*133|1|0.53|ENSG00000118046|chr19:1207000-1207001|-/G|frameshift_variant', 'STK11|p.D53Gfs*110|2|0.64|ENSG00000118046|chr19:1207065-1207066|-/G|frameshift_variant', 'STK11|p.Q37Pfs*123|1|0.29|ENSG00000118046|chr19:1207022-1207029|CAGCCGCG/-|frameshift_variant', 'STK11|p.R75Sfs*23|1|0.39|ENSG00000118046|chr19:1207137-1207138|-/CTCCT|frameshift_variant', 'STK11|p.V77Sfs*19|1|0.77|ENSG00000118046|chr19:1207140-1207140|C/-|frameshift_variant', 'STK11|p.D53Tfs*11|4|0.32|ENSG00000118046|chr19:1207066-1207066|G/-|frameshift_variant', 'STK11|p.E57Kfs*7|2|0.43|ENSG00000118046|chr19:1207078-1207078|G/-|frameshift_variant', 'STK11|p.Y60*|1|0.59|ENSG00000118046|chr19:1207093-1207093|C/-|frameshift_variant', 'STK11|p.A43Pfs*8|1|0.17|ENSG00000118046|chr19:1207038-1207038|G/-|frameshift_variant', 'STK11|p.K41Tfs*8|1|0.14|ENSG00000118046|chr19:1207035-1207041|AGCGGGC/-|frameshift_variant', 'STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 95823 13819 RYIPTAAAF True PC9_epitope_Rep4 1008.5392658013599 1008.53816993586 61.051 2 0.12780023752197414 0.0009763336717956729 0.0050385912652885145 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 76814 4363 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 23.875 2 0.12778946071291694 0.0009763336717956729 0.005039836395570119 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 111408 18463 THSLPVVVI True PC9_epitope_Rep1 963.5753169569099 963.57420993586 75.809 2 0.12778880528646255 0.0009763336717956729 0.005039912131942449 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 3920 10245 AHDDGRWSL True PC9_epitope_Rep5 1055.47845644995 1055.47787496793 44.394 1 0.12778736458621218 0.0009763336717956729 0.005040078612843821 ['ENSG00000075618|ENST00000382361|FSCN1'] 104908 17739 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.4909699358602 73.031 2 0.12778641245256317 0.0009763336717956729 0.005040188640131281 ['ENSG00000113387|ENST00000265073|SUB1'] 1911 9602 AEIISEIRA True H1975_Epitope_Rep2 1000.55530978832 1000.55420993586 41.909 2 0.12777940616283628 0.0009763336717956729 0.005040998350159167 ['ENSG00000111331|ENST00000228928|OAS3'] 13989 12674 DRDPTAYAL True PC9_epitope_Rep2 1020.4876241513199 1020.48652993586 54.059 2 0.12777519976397061 0.0009763336717956729 0.005041484540950117 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 114625 20529 TQDTNTFFL True PC9_epitope_Rep4 1085.50293986229 1085.50184993586 87.116 2 0.12776122340383028 0.0009763336717956729 0.0050431003100913545 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 103685 5324 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 25.867 2 0.12775194524858907 0.0009763336717956729 0.005044173213481861 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 111596 6424 TIDDLEEK True PC9_epitope_Rep2 961.46040634397 961.45930993586 30.119 2 0.12775012767002078 0.0009763336717956729 0.005044383420132948 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 40206 10895 HQGPATTVAF True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 46.792 2 0.12774759996409385 0.0009763336717956729 0.005044675768762999 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 17493 5342 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.53465490379 27.266 3 0.1277430051068751 0.0009763336717956729 0.00504520724197412 ['ENSG00000162378|ENST00000294353|ZYG11B'] 42403 6672 IEDGKVVTV True H1975_Epitope_Rep3 958.53351171458 958.53240993586 30.618 2 0.12773830786688525 0.0009763336717956729 0.0050457506143579516 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 103408 8314 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 36.814 2 0.12773486365856046 0.0009763336717956729 0.005046149073733658 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 105111 13356 SREPSQVIF True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 56.233 2 0.12772916281269733 0.0009763336717956729 0.005046808670733828 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 8158 15558 ATEPVIAFY True H1975_Epitope_Rep2 1009.5120479940099 1009.5114749679301 65.0 1 0.127727545907926 0.0009763336717956729 0.005046995764626562 ['ENSG00000106992|ENST00000644144|AK1'] 6135 14878 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 62.233 2 0.1277265134536272 0.0009763336717956729 0.005047115234654465 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 99234 7531 SHMEGVASV True PC9_epitope_Rep3 915.4120166829099 915.41090993586 33.97 2 0.12772614209326028 0.0009763336717956729 0.00504715820714726 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 89882 8187 RAYDGTTYL True H1975_Epitope_Rep3 1058.50327421546 1058.5021699358601 36.471 2 0.1277245787494479 0.0009763336717956729 0.005047339115641194 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 29526 17074 FVHDLVLYL True NCI_RA007_Epitope_Rep2 1117.6171817688898 1117.6160899358601 71.151 2 0.1277134773130654 0.0009763336717956729 0.005048623945396297 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 108509 19321 SYM[Oxidation]GHFDLL True PC9_epitope_Rep3 1097.48518200361 1097.48408993586 79.54 2 0.1277091136766888 0.0009763336717956729 0.00504912906079957 ['ENSG00000169976|ENST00000367569|SF3B5'] 8182 9626 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51166993586 42.042 2 0.12770151303388216 0.0009763336717956729 0.0050500089964351244 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 74592 21632 NGFPVFATV True PC9_epitope_Rep2 950.48616759934 950.48561496793 88.683 1 0.12770035036716523 0.0009763336717956729 0.0050501436130571085 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 1425 8415 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49109496793 37.352 1 0.1276953195618431 0.0009763336717956729 0.005050726133612858 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 66152 12420 LSEPEEAAALY True H1975_Epitope_Rep3 1191.5659340416698 1191.5648299358602 52.963 2 0.12769490527480057 0.0009763336717956729 0.0050507741071486026 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF'] 40456 9781 HRDERVLSL True PC9_epitope_Rep1 1123.60980497267 1123.60816490379 42.484 3 0.12769098292192338 0.0009763336717956729 0.00505122832924043 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 142569 20447 YYLNEIQSF True PC9_epitope_Rep4 1175.5498900547097 1175.54937496793 86.794 1 0.12768596146413214 0.0009763336717956729 0.005051809890080126 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 68049 11901 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48127496793 50.778 1 0.12767868803385124 0.0009763336717956729 0.005052652380086893 ['ENSG00000174231|ENST00000304992|PRPF8'] 65893 10333 LSDPGSGLY True H1975_Epitope_Rep1 907.4287122928699 907.42816496793 44.693 1 0.12766031262201316 0.0009763336717956729 0.005054781440668067 ['ENSG00000182108|ENST00000331808|DEXI'] 134668 13590 VYSRTFTWL True NCI_RA007_Epitope_Rep3 1171.6025943339098 1171.6014899358602 60.753 2 0.1276597881008649 0.0009763336717956729 0.005054842227062384 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 8656 18940 AVAELNYGL True PC9_epitope_Rep4 948.4916469026 948.49054993586 80.94 2 0.12765896322720013 0.0009763336717956729 0.005054937822555623 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 49428 13398 KEWIQIIQA True NCI_RA007_Epitope_Rep4 1127.63389446219 1127.63278993586 58.71 2 0.12765597838891482 0.0009763336717956729 0.005055283753506682 ['nc|ENSG00000127084|Q5JSP0-2|FGD3', 'nc|ENSG00000127084|Q5JSP0-3|FGD3', 'ENSG00000127084|ENST00000375482|FGD3'] 134003 9016 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 40.03 3 0.12764509157686707 0.0009763336717956729 0.005056545689099529 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 9895 18223 AYLKGTVLF True PC9_epitope_Rep4 1010.5800679841799 1010.57896993586 78.165 2 0.12764504485685627 0.0009763336717956729 0.005056551105276865 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 39883 8172 HPDYNNEL True PC9_epitope_Rep5 1000.4250238947601 1000.42392993586 36.375 2 0.1276436516245749 0.0009763336717956729 0.005056712623122449 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 95276 14613 RVPKTLVLV True PC9_epitope_Rep3 1023.6804507317898 1023.6793499358599 61.34 2 0.12764026778606422 0.0009763336717956729 0.0050571049336647095 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 39138 9202 HHYSGNNIEL True PC9_epitope_Rep1 1182.5417849825 1182.54013490379 40.245 3 0.12762844075792149 0.0009763336717956729 0.005058476353352283 ['ENSG00000156482|ENST00000287038|RPL30'] 7576 8209 ASETLQSPGY True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 36.558 2 0.12762751433706626 0.0009763336717956729 0.005058583793216247 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1'] 97304 10046 SEALPSDIAA True H1975_Epitope_Rep1 972.47639076128 972.47584496793 43.581 1 0.12762645167941067 0.0009763336717956729 0.00505870703563995 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 90790 4270 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 22.757 2 0.12762642914845584 0.0009763336717956729 0.0050587096487142574 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 116886 19262 TVFDEAIRAV True PC9_epitope_Rep4 1119.59242357303 1119.5913299358601 82.194 2 0.12761749813489914 0.0009763336717956729 0.00505974554602258 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 60881 17847 LHYGLPVVV True PC9_epitope_Rep6 995.5804023373499 995.57930993586 81.278 2 0.12761491502050698 0.0009763336717956729 0.005060045197146097 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 1570 6671 AEETPPTSV True H1975_Epitope_Rep3 929.43419159613 929.43364496793 30.614 1 0.12761186909224564 0.0009763336717956729 0.005060398558844276 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 127035 12047 VLSIGDGIAR True PC9_epitope_Rep6 999.5712942056299 999.57018993586 57.642 2 0.1276113271774684 0.0009763336717956729 0.005060461429551358 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 90359 13925 REGDLLFTVA True NCI_RA007_Epitope_Rep2 1119.5924235730301 1119.5913299358601 58.82 2 0.12760273410888415 0.0009763336717956729 0.005061458464331983 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 2270 7958 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 35.558 2 0.1275981846923709 0.0009763336717956729 0.005061986401220786 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 97957 11112 SENPSVYVP True NCI_RA007_Epitope_Rep1 990.4658260775799 990.46472993586 47.223 2 0.12759649259289513 0.0009763336717956729 0.005062182774651068 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 88713 11985 QTHSVFVNV True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 51.419 2 0.12759293836522256 0.0009763336717956729 0.00506259527824701 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 141636 14993 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.4906099358602 63.06 2 0.12759030492778126 0.0009763336717956729 0.005062900936244765 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 3283 4770 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 25.798 2 0.12758331159573055 0.0009763336717956729 0.005063712726793895 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 26055 14458 FGIDRPAEL True PC9_epitope_Rep6 1016.5290950404799 1016.52798993586 67.5 2 0.12758251935024542 0.0009763336717956729 0.005063804699230407 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 110946 12471 THAAQQILL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 52.968 2 0.1275765805719731 0.0009763336717956729 0.005064494189196426 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 103686 5412 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 26.21 2 0.12757119062794153 0.0009763336717956729 0.005065120039549039 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 92178 8831 RLFVGSIPK True NCI_RA007_Epitope_Rep2 1015.6178504752298 1015.61674993586 39.0 2 0.12756888019735507 0.0009763336717956729 0.005065388337175999 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 139348 21183 YLLPAIVHI True PC9_epitope_Rep2 1037.62735252977 1037.6262499358602 86.936 2 0.12756454073549628 0.0009763336717956729 0.00506589229280987 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 128774 17321 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 71.883 2 0.12756082657285453 0.0009763336717956729 0.005066323669560201 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 32106 7255 GETGYVPPA True H1975_Epitope_Rep3 889.4181476091699 889.4175949679301 32.879 1 0.12755967957848463 0.0009763336717956729 0.0050664568930719935 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 72833 8201 MPNGDHIVSA True PC9_epitope_Rep2 1039.47567956863 1039.4745899358602 36.904 2 0.12755781676690736 0.0009763336717956729 0.005066673266158297 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 138281 11692 YHAQMPDSL True PC9_epitope_Rep4 1060.46478053176 1060.4636899358602 52.736 2 0.12755444498233398 0.0009763336717956729 0.005067064935638431 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 87549 17620 QQLDSKFLEQV True PC9_epitope_Rep4 1333.68778050985 1333.6866899358602 75.797 2 0.12755282708635182 0.0009763336717956729 0.005067252882427901 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 96451 3373 SAAIPAAGK True NCI_RA007_Epitope_Rep4 784.44430278736 784.44320993586 18.798 2 0.12755260671341126 0.0009763336717956729 0.0050672784831120804 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 111314 14854 THMTAIVGM True PC9_epitope_Rep3 959.4568587003499 959.45576993586 62.272 2 0.12754589284789564 0.0009763336717956729 0.00506805849254755 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 37765 18778 GYADIVQLL True NCI_RA007_Epitope_Rep4 990.5385970950199 990.5380449679301 81.242 1 0.12753997933329825 0.0009763336717956729 0.005068745615802769 ['ENSG00000134996|ENST00000346234|OSTF1'] 1547 9986 AEEPWGEEA True H1975_Epitope_Rep2 1016.4087051242799 1016.40760993586 43.401 2 0.12753804502218496 0.0009763336717956729 0.005068970393739856 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 21897 13818 ESDLDYIQY True H1975_Epitope_Rep3 1144.4924347482402 1144.4913299358602 58.456 2 0.12753347679405996 0.0009763336717956729 0.005069501286665969 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 137456 13868 YEDSGIPLP True H1975_Epitope_Rep1 989.4705771048499 989.47002496793 58.492 1 0.12753181371608474 0.0009763336717956729 0.005069694573486275 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 21426 16661 ERIQDYDVSL True PC9_epitope_Rep2 1236.5986311522797 1236.5975299358602 69.33 2 0.12753036311744428 0.0009763336717956729 0.005069863171371672 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 21487 5827 ERLKEAYSV True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 29.277 2 0.1275299100694519 0.0009763336717956729 0.0050699158286462405 ['ENSG00000174231|ENST00000304992|PRPF8'] 120506 9145 VEFDSVQSA True NCI_RA007_Epitope_Rep4 980.445090633 980.44454496793 42.017 1 0.12751890743627878 0.0009763336717956729 0.005071194817695112 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 115844 10324 TSDVGGYYY True H1975_Epitope_Rep2 1023.4185415319901 1023.41797496793 44.72 1 0.12751673575143735 0.0009763336717956729 0.0050714473002752055 ['ENSG00000131711|ENST00000296755|MAP1B'] 9462 7355 AVVGVVAGGGR True PC9_epitope_Rep1 940.5454138109598 940.54430993586 33.102 2 0.12751377757585688 0.0009763336717956729 0.0050717912410415565 ['ENSG00000161016|ENST00000528957|RPL8'] 54793 20155 KYNMVSYLL True PC9_epitope_Rep2 1129.58416738845 1129.58306993586 82.938 2 0.1275129625856437 0.0009763336717956729 0.005071886002241791 ['ENSG00000138678|ENST00000264409|GPAT3'] 6677 21369 APYPGFLSV True PC9_epitope_Rep2 949.49091862661 949.48982993586 87.665 2 0.12750929824721582 0.0009763336717956729 0.005072312086649944 ['ENSG00000160447|ENST00000291906|PKN3'] 95091 20165 RVADILTQL True PC9_epitope_Rep3 1027.60259433391 1027.6014899358602 82.819 2 0.1275070845942243 0.0009763336717956729 0.00507256950431902 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 111898 15656 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 65.365 2 0.12750552618457536 0.0009763336717956729 0.0050727507338164625 ['ENSG00000213719|ENST00000375784|CLIC1'] 133697 7714 VYASDRATF True PC9_epitope_Rep6 1028.4927095317598 1028.4916099358602 39.018 2 0.1275016020501407 0.0009763336717956729 0.005073207104718944 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 111160 15004 THGIFTIST True PC9_epitope_Rep2 975.5025459394701 975.50144993586 62.968 2 0.1274987833676596 0.0009763336717956729 0.005073534938120879 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 62101 7459 LLEDKHFQSY True H1975_Epitope_Rep1 1278.6244519773 1278.62334993586 33.688 2 0.12749772603837692 0.0009763336717956729 0.0050736579186222595 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 107431 19203 SVLQSIEKI True PC9_epitope_Rep1 1015.5913609438699 1015.59026993586 78.659 2 0.1274934940657207 0.0009763336717956729 0.005074150178816453 ['ENSG00000121931|ENST00000369763|LRIF1'] 107771 5207 SVSTVLTSK True NCI_RA007_Epitope_Rep3 920.51786165044 920.51676993586 27.481 2 0.12748737084839887 0.0009763336717956729 0.005074862510365182 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 141984 22085 YVITDLTQL True PC9_epitope_Rep1 1064.57537652656 1064.5748749679299 89.761 1 0.12747883041267216 0.0009763336717956729 0.0050758562079726245 ['ENSG00000134070|ENST00000256458|IRAK2'] 29441 21432 FVEETVYLL True PC9_epitope_Rep4 1111.58012755383 1111.57902993586 90.615 2 0.12747642786770672 0.0009763336717956729 0.005076135783564665 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 107303 16217 SVLDSFLKY True NCI_RA007_Epitope_Rep5 1070.5648118428599 1070.56370993586 69.125 2 0.12747544187982557 0.0009763336717956729 0.005076250523836996 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 45339 8724 IQDDAVHTL True PC9_epitope_Rep4 1010.50327421546 1010.50216993586 41.056 2 0.1274743025084289 0.0009763336717956729 0.00507638311665637 ['ENSG00000115816|ENST00000234170|CEBPZ'] 23951 19237 EYLLKVNEI True PC9_epitope_Rep5 1119.61757569171 1119.61646993586 79.034 2 0.12747328773071329 0.0009763336717956729 0.005076501212917578 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 105995 8515 SSVATITRL True H1975_Epitope_Rep2 946.54474510462 946.54364993586 37.708 2 0.12746891510371436 0.0009763336717956729 0.005077010114738187 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 118143 21797 TYIPGTQITF True PC9_epitope_Rep5 1139.58627556343 1139.5851699358602 88.874 2 0.12745480476497056 0.0009763336717956729 0.005078652667764071 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 92819 14478 RPAQPTLWTA True PC9_epitope_Rep3 1139.60874234351 1139.60764993586 60.798 2 0.12745302875850625 0.0009763336717956729 0.005078859445694898 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 25545 20270 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54732993586 84.002 2 0.12745066914530737 0.0009763336717956729 0.005079134184929038 ['ENSG00000125356|ENST00000371437|NDUFA1'] 21513 5561 ERMAGNEAL True PC9_epitope_Rep4 989.4600295044899 989.4589299358599 28.155 2 0.12744903006370933 0.0009763336717956729 0.005079325038370192 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 99816 11323 SIKTGFQAV True PC9_epitope_Rep5 949.52328138405 949.52218993586 48.548 2 0.12744599646897775 0.0009763336717956729 0.005079678286467642 ['ENSG00000125977|ENST00000374980|EIF2S2'] 132538 12406 VVDPNQVNV True PC9_epitope_Rep5 982.5083595959001 982.50726993586 52.718 2 0.1274451948145118 0.0009763336717956729 0.005079771639459428 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 24489 7704 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.49287496793 34.588 1 0.12744080547278067 0.0009763336717956729 0.005080282809983446 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 103885 11654 SQADAFFKA True PC9_epitope_Rep6 983.47124581119 983.47014993586 55.954 2 0.12743803021421532 0.0009763336717956729 0.0050806060349471655 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L'] 24561 17010 FAGMPITL True H1975_Epitope_Rep3 848.44661128648 848.44606496793 71.024 1 0.12742997463193398 0.0009763336717956729 0.00508154435574992 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 109718 2771 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 14.689 2 0.1274290537904275 0.0009763336717956729 0.005081651626961867 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 34916 15268 GQMKMFQEV True PC9_epitope_Rep5 1096.5045371687597 1096.5034299358601 63.738 2 0.1274219169980947 0.0009763336717956729 0.005082483085815469 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF'] 107095 12488 SVHKGFAFV True PC9_epitope_Rep3 990.5287011176598 990.52760993586 53.06 2 0.12742142150782898 0.0009763336717956729 0.005082540816957664 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 12666 17926 DLDLSPLEY True H1975_Epitope_Rep2 1063.50735653639 1063.50624993586 74.273 2 0.12741833496305888 0.0009763336717956729 0.005082900454581639 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 72801 19542 MPFGNVVSA True PC9_epitope_Rep2 920.4425885351999 920.44203496793 80.551 1 0.12740756985360396 0.0009763336717956729 0.005084154977855126 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 108507 19340 SYM[Oxidation]GHFDLL True PC9_epitope_Rep1 1097.48518200361 1097.48408993586 79.197 2 0.12740517075995728 0.0009763336717956729 0.005084434600180571 ['ENSG00000169976|ENST00000367569|SF3B5'] 61739 18047 LLAESVTEV True PC9_epitope_Rep5 959.5175272972699 959.51642993586 74.432 2 0.12740035446726153 0.0009763336717956729 0.005084996000682364 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 122220 12639 VGAPKIPSV True PC9_epitope_Rep2 866.5225531080599 866.52144993586 53.925 2 0.12739402506071631 0.0009763336717956729 0.00508573386654205 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 141231 9786 YTDAALNY True H1975_Epitope_Rep2 929.41306222873 929.4125149679301 42.629 1 0.12739312535522224 0.0009763336717956729 0.005085838760420895 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 1979 12244 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 52.178 2 0.12738956882977734 0.0009763336717956729 0.005086253425519077 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 21432 6973 ERIQHAVQL True PC9_epitope_Rep2 1092.60399131624 1092.60288993586 32.217 2 0.12738657403334416 0.0009763336717956729 0.005086602622840765 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 104293 20182 SQIISLQTL True PC9_epitope_Rep4 1001.5757108797301 1001.5746099358599 85.767 2 0.12737993204643658 0.0009763336717956729 0.005087377171547744 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 95799 16337 RYILLPVVL True NCI_RA007_Epitope_Rep3 1084.7008518231999 1084.6997499358602 71.966 2 0.12737542631222215 0.0009763336717956729 0.005087902669219695 ['DOCK4|p.L1501*|1|0.32|ENSG00000128512|chr7:111747332-111747332|G/-|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 21331 14831 ERFEKTFQL True PC9_epitope_Rep1 1196.6189726740397 1196.61733490379 61.866 3 0.1273744982380798 0.0009763336717956729 0.00508801091587065 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 25597 15458 FELPQTPLA True H1975_Epitope_Rep2 1014.5385970950199 1014.53807496793 64.616 1 0.12737171042655712 0.0009763336717956729 0.005088336088044424 ['ENSG00000113369|ENST00000265138|ARRDC3'] 125187 16490 VIIDDHPEVTV True PC9_epitope_Rep5 1235.63976768827 1235.6386699358602 68.428 2 0.12736428146856504 0.0009763336717956729 0.005089202706282315 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 141552 5652 YTNFDAER True NCI_RA007_Epitope_Rep2 1014.4406739588999 1014.43956993586 26.599 2 0.12736332091115132 0.0009763336717956729 0.00508931476980517 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 36010 21235 GTYDIFYTA True PC9_epitope_Rep3 1049.47057710485 1049.47007496793 86.972 1 0.12735710940721498 0.0009763336717956729 0.0050900394940259185 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 93439 5847 RQGNMTAAL True NCI_RA007_Epitope_Rep4 960.4810993022398 960.48000993586 29.115 2 0.12735446959696664 0.0009763336717956729 0.005090347523305602 ['ENSG00000162704|ENST00000359856|ARPC5'] 29491 21708 FVFPGELLL True H1975_Epitope_Rep1 1033.5848190114498 1033.5837299358602 90.196 2 0.12734906216400033 0.0009763336717956729 0.005090978552978229 ['ENSG00000105281|ENST00000542575|SLC1A5'] 78486 8665 NYNNQSSNF True PC9_epitope_Rep3 1086.4366512076201 1086.43554993586 38.279 2 0.12734795071075064 0.0009763336717956729 0.005091108265442684 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 53155 15188 KQADPFASL True PC9_epitope_Rep2 975.5025459394699 975.50144993586 63.681 2 0.1273465951351292 0.0009763336717956729 0.005091266472671401 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 96099 17734 RYMPQNPCII True PC9_epitope_Rep5 1233.5998345359299 1233.59872993586 73.232 2 0.12734363038739194 0.0009763336717956729 0.005091612500831592 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF'] 6584 9783 APVLPHTAV True PC9_epitope_Rep4 903.51780208079 903.51670993586 45.272 2 0.1273394294345686 0.0009763336717956729 0.005092102851236434 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'ENST00000471231.6_1_16:30937150-30941463:+|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B', 'nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 1388 7130 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4596499358599 32.358 2 0.1273326832729911 0.0009763336717956729 0.005092890384665742 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 105495 19088 SRYPDQWIV True PC9_epitope_Rep5 1162.57710786206 1162.5760099358602 78.452 2 0.12733202825998402 0.0009763336717956729 0.005092966855947592 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 52836 11193 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 48.378 2 0.12732865802709983 0.0009763336717956729 0.0050933603408184255 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 33027 20439 GIIDAFHQI True PC9_epitope_Rep3 1012.5341804209202 1012.53308993586 83.874 2 0.12730714866504167 0.0009763336717956729 0.005095872327343741 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 25692 11165 FEQVSGVTV True H1975_Epitope_Rep2 964.4865615221598 964.48546993586 47.983 2 0.12730347793133356 0.0009763336717956729 0.0050963011381917715 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 4298 23395 AIIEYMPLL True PC9_epitope_Rep3 1061.5831047592899 1061.58200993586 95.27 2 0.1273011105762956 0.0009763336717956729 0.00509657770865691 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 49013 11390 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 51.924 2 0.1272989570107212 0.0009763336717956729 0.005096829315592873 ['ENSG00000197747|ENST00000368811|S100A10'] 76044 9129 NM[Oxidation]DNM[Oxidation]FESY True H1975_Epitope_Rep2 1181.40052635357 1181.39942993586 40.067 2 0.1272942336362272 0.0009763336717956729 0.005097381203034428 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 47979 12468 IYKDYQYYF True NCI_RA007_Epitope_Rep4 1301.59684024713 1301.59574993586 54.966 2 0.1272941488601611 0.0009763336717956729 0.005097391108956311 ['ENSG00000260314|ENST00000569591|MRC1'] 115458 9178 TRMSTVSEL True PC9_epitope_Rep2 1022.5066453437399 1022.5055499358599 40.642 2 0.12727930542711696 0.0009763336717956729 0.005099125827355703 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 3890 10034 AHAVGNVEL True PC9_epitope_Rep1 908.4715801643599 908.47048993586 43.464 2 0.1272774181080348 0.0009763336717956729 0.0050993464356081045 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU'] 90350 11607 REFSDFIQA True NCI_RA007_Epitope_Rep4 1111.52982331647 1111.5287299358602 51.599 2 0.12727370363062304 0.0009763336717956729 0.00509978064731917 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 73256 4977 MSEEHTAVY True H1975_Epitope_Rep2 1065.44371073401 1065.4426099358602 24.227 2 0.1272695569619368 0.0009763336717956729 0.005100265423844459 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 109808 4719 TEEEFSKTP True H1975_Epitope_Rep2 1066.4818700645399 1066.48076993586 23.244 2 0.1272671489058406 0.0009763336717956729 0.005100546964352561 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 21213 8389 ERDPATYNI True PC9_epitope_Rep6 1077.5090878718902 1077.50798993586 41.936 2 0.1272630618940359 0.0009763336717956729 0.005101024836740211 ['ENSG00000138246|ENST00000260818|DNAJC13'] 13955 20669 DRDDFPVVL True PC9_epitope_Rep5 1074.53457434374 1074.53346993586 84.558 2 0.12726295628648088 0.0009763336717956729 0.005101037185448474 ['ENSG00000126458|ENST00000246792|RRAS'] 59008 6519 LEVLSGER True NCI_RA007_Epitope_Rep1 901.4868958753299 901.48578993586 29.372 2 0.12726246805009614 0.0009763336717956729 0.0051010942753884885 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 47933 14193 IYIKQIKTF True PC9_epitope_Rep3 1152.6906810623198 1152.6890249037901 59.678 3 0.12725872444163513 0.0009763336717956729 0.005101532039903739 ['ENSG00000103479|ENST00000262133|RBL2'] 104666 14245 SQTLVSQGL True PC9_epitope_Rep2 931.4974605590301 931.49636993586 60.061 2 0.12725683319716213 0.0009763336717956729 0.005101753209464429 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 84850 10506 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 45.429 2 0.12724648691150414 0.0009763336717956729 0.005102963311461461 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 87894 8362 QRIDSDDAL True PC9_epitope_Rep3 1031.4883524273098 1031.48724993586 37.133 2 0.127245470992284 0.0009763336717956729 0.005103082148613998 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 41449 16683 HYIPRAVLL True PC9_epitope_Rep5 1080.64439957624 1080.64330993586 69.174 2 0.12723899027280788 0.0009763336717956729 0.00510384029476363 ['ENSG00000037042|ENST00000251412|TUBG2', 'ENST00000589613.1_1_17:40761741-40762767:+|nuORF', 'ENST00000588056.1_1_17:40761755-40764233:+|nuORF', 'TUBG1|p.V182Wfs*14|1|0.1|ENSG00000131462|chr17:42613010-42613010|G/-|frameshift_variant', 'ENST00000588870.1_1_17:40811874-40817754:+|nuORF', 'ENSG00000131462|ENST00000251413|TUBG1', 'ENST00000418303.1_1_7:43958366-43959461:+|nuORF'] 106169 12598 STDPLDAGVDY True H1975_Epitope_Rep1 1151.4982484046698 1151.49714993586 53.508 2 0.1272339568710953 0.0009763336717956729 0.0051044292029529805 ['ENSG00000139645|ENST00000267116|ANKRD52'] 105450 16078 SRVDDVYSVL True PC9_epitope_Rep6 1151.58225281215 1151.5811499358601 74.172 2 0.1272298108807191 0.0009763336717956729 0.0051049143341092154 ['ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 13202 6527 DLSELVEK True NCI_RA007_Epitope_Rep1 931.4862271689899 931.48512993586 29.404 2 0.12722487756130324 0.0009763336717956729 0.005105491651313019 ['nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'ENST00000446144.2_1_15:20773467-20778061:+|nuORF', 'nc|ENSG00000290359|Q0D2H9|GOLGA8DP'] 53172 19719 KQDEPIDLF True PC9_epitope_Rep1 1103.5498900547097 1103.5487899358602 80.675 2 0.1272226298629383 0.0009763336717956729 0.0051057547074267046 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 41619 17003 IADSNYNWFY True H1975_Epitope_Rep3 1291.55095268387 1291.54984993586 70.996 2 0.12722046348801253 0.0009763336717956729 0.005106008258567933 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant', 'DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE'] 115229 8856 TREAGSALL True PC9_epitope_Rep1 916.4977949121999 916.49668993586 38.905 2 0.12721940308874502 0.0009763336717956729 0.005106132371530713 ['ENSG00000145386|ENST00000274026|CCNA2'] 21772 16320 ERVPINDVL True PC9_epitope_Rep3 1053.58185888933 1053.5807699358602 67.911 2 0.12721720833666897 0.0009763336717956729 0.005106389262658909 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 140661 17279 YRTDMIQAL True PC9_epitope_Rep5 1109.55392988933 1109.55282993586 71.471 2 0.12721693302083045 0.0009763336717956729 0.0051064214886964955 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 30189 17186 FYQPKIQQF True PC9_epitope_Rep5 1197.61824439805 1197.6171499358602 71.127 2 0.12721599427539776 0.0009763336717956729 0.005106531371437718 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 73892 20528 NAVVELVTV True PC9_epitope_Rep2 942.5385970950199 942.53750993586 84.393 2 0.12721501104359031 0.0009763336717956729 0.0051066464639217615 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 105833 4211 SSLNHIVEK True NCI_RA007_Epitope_Rep4 1025.5505587610498 1025.54946993586 22.508 2 0.12720887700098202 0.0009763336717956729 0.005107364543584289 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'ENST00000491790.1_1_1:153733326-153733395:+|nuORF'] 140741 13354 YSDDIPHAL True PC9_epitope_Rep4 1029.47672511445 1029.47562993586 59.268 2 0.1271802236429608 0.0009763336717956729 0.005110720153227624 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 104057 2538 SQDPGTHVV True PC9_epitope_Rep6 938.4457593393399 938.44466993586 14.691 2 0.12717762664710708 0.0009763336717956729 0.005111024395758137 ['ENSG00000130935|ENST00000253247|NOL11'] 21216 5188 ERDPGGITA True PC9_epitope_Rep3 914.4457593393399 914.44466993586 25.039 2 0.1271631669821945 0.0009763336717956729 0.005112718695635767 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 92185 7619 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 36.005 2 0.1271610207718211 0.0009763336717956729 0.005112970223159176 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 64276 20794 LPIFLPRVA True PC9_epitope_Rep3 1024.64333694708 1024.64222993586 85.255 2 0.12714329500411933 0.0009763336717956729 0.005115048079042406 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 27817 20401 FQDEINWRL True PC9_epitope_Rep5 1219.5985715826298 1219.59746993586 83.51 2 0.12714051692714365 0.0009763336717956729 0.005115373806875246 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF'] 1974 11962 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47456993586 51.016 2 0.12713960414194989 0.0009763336717956729 0.005115480834829235 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 25654 7564 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.4216949679301 34.049 1 0.12712696602492948 0.0009763336717956729 0.005116962933951174 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 72786 21703 MPALGWAVA True PC9_epitope_Rep1 914.4684093602199 914.46730993586 88.312 2 0.1271251816198728 0.0009763336717956729 0.005117172228935831 ['AOC1|p.P703Qfs*12|1|0.24|ENSG00000002726|chr7:150861059-150861059|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 61260 5128 LIPAANTGESK True NCI_RA007_Epitope_Rep2 1099.58733819259 1099.58624993586 24.569 2 0.12712360556723415 0.0009763336717956729 0.005117357093010392 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 73031 15564 M[Oxidation]RDPIRILV True PC9_epitope_Rep1 1127.64849936095 1127.64685490379 64.69 3 0.12712015776212138 0.0009763336717956729 0.005117761528323996 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 94977 17063 RTMENLVEL True PC9_epitope_Rep2 1103.5644945730298 1103.5633899358602 70.884 2 0.12711765938816655 0.0009763336717956729 0.005118054612836387 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 17857 21495 EHVLLVSIL True PC9_epitope_Rep1 1021.61718176889 1021.61608993586 87.524 2 0.12711125420949315 0.0009763336717956729 0.005118806080325481 ['ENSG00000146909|ENST00000275820|NOM1'] 48659 12368 KASDLYITL True NCI_RA007_Epitope_Rep5 1022.56481184286 1022.56370993586 54.22 2 0.12710876306622837 0.0009763336717956729 0.005119098375157889 ['ENSG00000143418|ENST00000368954|CERS2'] 93196 8429 RPPPIGAEV True PC9_epitope_Rep2 934.5236157372199 934.52250993586 37.792 2 0.12710656424806563 0.0009763336717956729 0.005119356384049736 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 4466 12136 AIVDKVPSV True PC9_epitope_Rep4 926.54368247546 926.54258993586 54.496 2 0.127105275996373 0.0009763336717956729 0.005119507553183482 ['ENSG00000181789|ENST00000314797|COPG1'] 4038 15471 AHFSVSDAL True PC9_epitope_Rep1 945.45559574705 945.45448993586 64.331 2 0.12710281171397755 0.0009763336717956729 0.005119796735158667 ['ENSG00000101191|ENST00000395343|DIDO1'] 115439 13946 TRMPDGPVAL True PC9_epitope_Rep2 1055.54336520563 1055.54226993586 58.921 2 0.12709832732615914 0.0009763336717956729 0.005120323016381034 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 8144 13056 ATELQSMMY True H1975_Epitope_Rep2 1072.45691827 1072.45582993586 55.342 2 0.12709508014465146 0.0009763336717956729 0.0051207041340358556 ['ENSG00000196284|ENST00000371459|SUPT3H'] 90153 7473 REDENLQVP True H1975_Epitope_Rep2 1098.53055159246 1098.5294499358602 33.692 2 0.12709450638239245 0.0009763336717956729 0.005120771478694631 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF', 'MTMR3|p.C235Qfs*20|1|0.17|ENSG00000100330|chr22:30007143-30007152|GCTGTGGACA/-|frameshift_variant'] 7522 7808 ASDPYQVHV True H1975_Epitope_Rep3 1014.4770594676198 1014.47596993586 35.016 2 0.12708148969815258 0.0009763336717956729 0.005122299530152917 ['ENSG00000047315|ENST00000314595|POLR2B'] 28794 19193 FSVDDVQTV True PC9_epitope_Rep1 1008.4763907612801 1008.47528993586 78.62 2 0.12707191988883904 0.0009763336717956729 0.005123423232515182 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 11964 16160 DHNINLVSM True PC9_epitope_Rep2 1041.4913296327702 1041.49022993586 67.414 2 0.12706407279483142 0.0009763336717956729 0.005124344831517361 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 141104 9999 YSQLVVETIR True NCI_RA007_Epitope_Rep5 1206.66083748602 1206.6597499358602 45.102 2 0.12706404596717177 0.0009763336717956729 0.0051243479825609705 ['ENSG00000184897|ENST00000333762|H1-10'] 24524 22252 FAFQAEIAQL True PC9_epitope_Rep2 1136.5866099165999 1136.58550993586 91.069 2 0.12706378139115446 0.0009763336717956729 0.005124379058447365 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'HSP90AA1|p.T19S|1|0.38|ENSG00000080824|chr14:102086324-102086324|T/A|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 8573 15605 ATVPGLLKV True PC9_epitope_Rep4 896.5695033004799 896.56840993586 67.948 2 0.12705353809421102 0.0009763336717956729 0.005125582331453666 ['ENSG00000179820|ENST00000391770|MYADM'] 54720 21188 KYMDINFDF True PC9_epitope_Rep3 1191.52704643515 1191.5259499358601 86.788 2 0.1270528445773957 0.0009763336717956729 0.005125663808422254 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 112638 19857 TLFEDSFQQI True PC9_epitope_Rep6 1226.58191845898 1226.58082993586 89.039 2 0.1270511641338833 0.0009763336717956729 0.005125861238532678 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'nc|ENSG00000289720|Q96J02-3|ITCH', 'POFUT1-ITCH|1|fusion', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'ENSG00000123124|ENST00000517970|WWP1', 'nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF'] 129092 13633 VQPSLFYHL True NCI_RA007_Epitope_Rep4 1102.58113061334 1102.58002993586 59.659 2 0.12704820056052346 0.0009763336717956729 0.005126209437798325 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 30244 20068 FYVGHIDAF True PC9_epitope_Rep3 1067.50763131991 1067.50652993586 82.441 2 0.1270468620183068 0.0009763336717956729 0.0051263667148173705 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 165 13530 AADPVSPLL True NCI_RA007_Epitope_Rep4 881.4858332461699 881.48528496793 59.251 1 0.12704206092667714 0.0009763336717956729 0.005126930875997985 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 44513 23598 ILLPQFLGV True PC9_epitope_Rep5 998.6164534928998 998.61534993586 95.748 2 0.12703977889969634 0.0009763336717956729 0.005127199051189471 ['ENSG00000099282|ENST00000373290|TSPAN15'] 142427 20484 YYFDSYAHF True PC9_epitope_Rep3 1211.4923751785898 1211.4912699358601 84.05 2 0.12703755431483377 0.0009763336717956729 0.005127460489259577 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.T357Pfs*4|1|0.34|ENSG00000111218|chr12:3592317-3592317|G/-|frameshift_variant', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF'] 39293 20570 HIPDVITYL True PC9_epitope_Rep2 1069.58079626017 1069.5796899358602 84.557 2 0.1270371106002238 0.0009763336717956729 0.005127512637135276 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 73481 22466 M[Oxidation]VDGTLLLL True PC9_epitope_Rep2 989.5467196310099 989.54562993586 91.904 2 0.12703679132874834 0.0009763336717956729 0.0051275501600651216 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 133642 18686 VYAILTHGI True PC9_epitope_Rep3 985.5596668927699 985.55856993586 77.096 2 0.12703526729954323 0.0009763336717956729 0.005127729277937115 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 20801 19080 EQIEALLHTV True PC9_epitope_Rep4 1151.6186383208699 1151.61754993586 81.482 2 0.1270334090330542 0.0009763336717956729 0.005127947686749821 ['nc|ENSG00000241258|O75575-3|CRCP', 'ENST00000492264.1_1_7:65615923-65617341:+|nuORF', 'nc|ENSG00000241258|O75575-4|CRCP', 'nc|ENSG00000241258|O75575-2|CRCP', 'ENSG00000241258|ENST00000395326|CRCP'] 42155 14854 IDPFSLDALSK True H1975_Epitope_Rep3 1204.6339540318397 1204.6328499358601 62.519 2 0.12703065479780312 0.0009763336717956729 0.005128271418831165 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 16259 9827 EEEYPGITA True H1975_Epitope_Rep1 1007.4447562798298 1007.44364993586 42.727 2 0.127030217059609 0.0009763336717956729 0.0051283228723107786 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 21436 8040 ERISKNYAL True PC9_epitope_Rep5 1092.5927579262 1092.5916699358602 35.863 2 0.12702735861999667 0.0009763336717956729 0.005128658877078706 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 138079 20392 YGFPSPIFL True H1975_Epitope_Rep2 1039.5378688190299 1039.53727496793 84.501 1 0.1270138020697494 0.0009763336717956729 0.00513025272117158 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 121385 6258 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51731496793 29.083 1 0.12700806315490626 0.0009763336717956729 0.00513092759212262 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 36793 9161 GVLAWVKEK True NCI_RA007_Epitope_Rep4 1028.6018660579198 1028.6007699358602 42.077 2 0.12699712081566744 0.0009763336717956729 0.005132214604307708 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-7|IL32'] 78221 21846 NYGDYFNVF True PC9_epitope_Rep4 1137.47672511445 1137.47562993586 92.233 2 0.12699711294083912 0.0009763336717956729 0.005132215530640618 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 85726 13200 QHAVEAISL True PC9_epitope_Rep3 966.5134449763399 966.51234993586 55.811 2 0.12698899780507106 0.0009763336717956729 0.005133170218702484 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 39464 9545 HLDAELDAY True H1975_Epitope_Rep2 1045.4716397340098 1045.4705499358602 41.686 2 0.12697794061695428 0.0009763336717956729 0.005134471299005724 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 141974 20512 YVINDLTAV True PC9_epitope_Rep2 1006.53351171458 1006.53240993586 84.33 2 0.12697570641054476 0.0009763336717956729 0.005134734233554716 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS'] 137869 10427 YETDNNIVV True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 45.121 1 0.1269723603112505 0.0009763336717956729 0.005135128046926688 ['ENSG00000150787|ENST00000280362|PTS'] 31962 6051 GEPPKDYRIP True H1975_Epitope_Rep2 1170.6033226098998 1170.60166490379 28.252 3 0.12696613485943486 0.0009763336717956729 0.005135860819640188 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 117652 13041 TVTNAVVTV True PC9_epitope_Rep4 902.50729696674 902.50618993586 58.056 2 0.1269637643911285 0.0009763336717956729 0.005136139864852656 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 97693 9386 SEIDMNDIKA True NCI_RA007_Epitope_Rep5 1134.5226893307001 1134.5215899358602 42.743 2 0.12696182439125966 0.0009763336717956729 0.005136368247545476 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 21720 10879 ERSPVIQTL True PC9_epitope_Rep4 1041.58185888933 1041.5807699358602 49.611 2 0.12696005264589988 0.0009763336717956729 0.005136576831517191 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 114909 6983 TQSPSVKSL True PC9_epitope_Rep3 945.51311062317 945.51200993586 31.871 2 0.1269538081489402 0.0009763336717956729 0.005137312049742492 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant'] 28792 16560 FSTTVIQNV True PC9_epitope_Rep6 1007.5287606873098 1007.52766993586 76.136 2 0.1269529763102242 0.0009763336717956729 0.00513740999705362 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.D78E|1|0.25|ENSG00000100554|chr14:67350616-67350616|G/C|missense_variant'] 71436 18271 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.5641099358602 75.292 2 0.1269521367989477 0.0009763336717956729 0.005137508849652269 ['ENSG00000084652|ENST00000373610|TXLNA'] 88238 4935 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 24.065 2 0.12694980286483679 0.0009763336717956729 0.0051377836806135785 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 54171 11983 KVTEGLVDV True PC9_epitope_Rep2 958.5335117145798 958.53240993586 51.412 2 0.12694897770238564 0.0009763336717956729 0.005137880850559638 ['HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR'] 16258 9814 EEEYPGITA True H1975_Epitope_Rep1 1007.4447562798298 1007.44417496793 42.678 1 0.12693449050924416 0.0009763336717956729 0.005139587135623223 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 115786 9186 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4440499358602 40.287 2 0.12693053571058335 0.0009763336717956729 0.0051400530239643066 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 90625 8701 RENPNLVMPP True H1975_Epitope_Rep2 1165.5913780272099 1165.59028993586 38.431 2 0.1269226642229269 0.0009763336717956729 0.005140980434612416 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 110108 3844 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep3 1063.39504666987 1063.39394993586 19.897 2 0.12691811579395854 0.0009763336717956729 0.005141516400773987 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 101805 14156 SLPEELNRV True PC9_epitope_Rep5 1055.56112344475 1055.56002993586 59.462 2 0.12691788922079644 0.0009763336717956729 0.005141543100558423 ['ENSG00000137815|ENST00000389629|RTF1'] 74849 18930 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 77.599 2 0.1269158642518719 0.0009763336717956729 0.005141781732544214 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 75006 7640 NHSADFETV True PC9_epitope_Rep2 1018.43558857846 1018.43448993586 34.756 2 0.12691392528749137 0.0009763336717956729 0.0051420102395369266 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 52627 19743 KLPSETIFVGC True PC9_epitope_Rep3 1192.61619579272 1192.6150899358602 81.169 2 0.1269074633786139 0.0009763336717956729 0.005142771847625444 ['ENSG00000179409|ENST00000319004|GEMIN4'] 137647 12347 YEIDKTLGI True H1975_Epitope_Rep1 1050.55972646242 1050.5586299358602 52.523 2 0.12690149535580153 0.0009763336717956729 0.005143475344117167 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 41225 12330 HVLEEVQQV True PC9_epitope_Rep1 1079.56112344475 1079.56002993586 52.284 2 0.12689696000640177 0.0009763336717956729 0.005144010023625258 ['ENSG00000136026|ENST00000378026|CKAP4'] 105409 14247 SRSPEYLSL True PC9_epitope_Rep2 1050.53457434374 1050.53346993586 60.068 2 0.12689599004076313 0.0009763336717956729 0.005144124381491159 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 28267 12169 FRMTDQEAI True PC9_epitope_Rep4 1109.5175443806097 1109.51644993586 54.624 2 0.12689571003399672 0.0009763336717956729 0.005144157394440641 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 96950 7537 SAVTSVAKV True PC9_epitope_Rep5 860.4967322830399 860.49562993586 33.938 2 0.12688722480448789 0.0009763336717956729 0.005145157906272633 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 38110 16569 HAYIISSL True PC9_epitope_Rep1 902.4861675993401 902.48506993586 68.555 2 0.1268809392866485 0.0009763336717956729 0.0051458991685151435 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 45627 19394 IRDLNIVVV True PC9_epitope_Rep3 1039.6389798426299 1039.6378899358601 79.822 2 0.12688024102299902 0.0009763336717956729 0.005145981522454282 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'ENST00000474535.2_1_2:38545640-38570535:-|nuORF'] 36026 15751 GTYTGFIKV True PC9_epitope_Rep4 984.5280324113198 984.52692993586 68.51 2 0.12688005719122836 0.0009763336717956729 0.005146003203979198 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 1954 7004 AEINHSFTP True H1975_Epitope_Rep2 1014.47705946762 1014.47596993586 31.864 2 0.1268715263894271 0.0009763336717956729 0.0051470094442445415 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 132819 19161 VVLGEFGVRNV True PC9_epitope_Rep3 1187.6662572196299 1187.6651699358601 78.922 2 0.12686965625767427 0.0009763336717956729 0.0051472300591590215 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 105804 6723 SSIQGQWPK True NCI_RA007_Epitope_Rep4 1029.5243440132099 1029.5232499358601 32.483 2 0.12686278512059776 0.0009763336717956729 0.005148040710290767 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 16961 13303 EFTNVYIK True PC9_epitope_Rep5 1012.5229470308799 1012.52184993586 56.181 2 0.1268563037266697 0.0009763336717956729 0.005148805494737046 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4', 'ENSG00000254535|ENST00000421491|PABPC4L'] 21690 4205 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 23.137 2 0.12685527476052974 0.0009763336717956729 0.005148926919820946 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 113746 6089 TM[Oxidation]DNPTTTQY True H1975_Epitope_Rep2 1186.48121882198 1186.48012993586 28.396 2 0.12685421008071954 0.0009763336717956729 0.005149052562323369 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 5102 20827 ALLGILQHV True PC9_epitope_Rep5 962.59130137422 962.59020993586 85.16 2 0.12685217931258877 0.0009763336717956729 0.005149292220926972 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000464812.1_1_7:44525191-44530199:-|nuORF'] 40138 11811 HQADIGEYV True PC9_epitope_Rep2 1030.47197408718 1030.47086993586 50.762 2 0.1268516796190584 0.0009763336717956729 0.005149351193323477 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 99602 5119 SIFEPAKGGEK True NCI_RA007_Epitope_Rep4 1161.6029882567298 1161.60133490379 26.205 3 0.12685086227194375 0.0009763336717956729 0.005149447655713911 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 39154 9320 HHYSGNNIEL True PC9_epitope_Rep5 1182.5417849825 1182.54013490379 40.802 3 0.12685046067182004 0.0009763336717956729 0.005149495052760468 ['ENSG00000156482|ENST00000287038|RPL30'] 77242 8858 NRYDGIYKV True PC9_epitope_Rep2 1126.5771078620598 1126.5760099358602 39.424 2 0.12685030275496859 0.0009763336717956729 0.005149513690303231 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 86228 16311 QILEGVHYL True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 75.104 2 0.12684573483751846 0.0009763336717956729 0.00515005283025628 ['ENSG00000169967|ENST00000682094|MAP3K2'] 10029 5892 AYRQGHFTY True PC9_epitope_Rep4 1141.53049202281 1141.52884490379 29.562 3 0.12684442101321397 0.0009763336717956729 0.005150207907938746 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 129177 18976 VQSGLRILL True PC9_epitope_Rep2 997.6284151589299 997.62730993586 78.357 2 0.12684311554708938 0.0009763336717956729 0.0051503620036020045 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 105499 5550 SRYSSTETL True PC9_epitope_Rep4 1042.49310345458 1042.49200993586 28.114 2 0.12683699255469322 0.0009763336717956729 0.005151084814728064 ['ENSG00000110237|ENST00000263674|ARHGEF17'] 139092 15965 YLDIGQVYY True H1975_Epitope_Rep1 1132.54407639828 1132.54357496793 66.726 1 0.1268325691540231 0.0009763336717956729 0.005151607053272572 ['ENSG00000006555|ENST00000371276|TTC22'] 43667 13021 IHDGLTVHL True PC9_epitope_Rep1 1003.54507945779 1003.5439899358599 54.955 2 0.12682754499149954 0.0009763336717956729 0.005152200282428249 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 7108 16911 AQVALVNEV True PC9_epitope_Rep5 941.51819600361 941.51708993586 70.062 2 0.1268203839568866 0.0009763336717956729 0.005153045939183064 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 26102 12794 FGQLGREL True PC9_epitope_Rep2 918.49231560894 918.49120993586 54.514 2 0.12681443487455224 0.0009763336717956729 0.005153748578405546 ['ENSG00000277150|ENST00000622749|F8A3'] 104730 18945 SQVEIKLSL True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 77.895 2 0.12681169663108435 0.0009763336717956729 0.005154072020781531 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 12223 4578 DIIHDPGR True NCI_RA007_Epitope_Rep5 921.4668291370899 921.4657299358599 24.269 2 0.12680261418283742 0.0009763336717956729 0.005155144985767731 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000528296.5_1_8:146015816-146017457:-|nuORF', 'ENST00000525232.5_1_8:146017155-146017514:-|nuORF'] 54467 11074 KYGNLSNYL True NCI_RA007_Epitope_Rep5 1070.53965972418 1070.53856993586 49.229 2 0.12679461281339788 0.0009763336717956729 0.0051560904180263266 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 122251 9674 VGARIYHTI True PC9_epitope_Rep1 1028.5767139392399 1028.57560993586 42.068 2 0.1267916260875982 0.0009763336717956729 0.005156443369611145 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant', 'ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 1515 12426 AEEMETVIP True H1975_Epitope_Rep2 1017.4688628526899 1017.46827496793 52.882 1 0.12678747430093998 0.0009763336717956729 0.005156934039821477 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000497113.1_1_1:8022845-8031696:+|nuORF', 'ENST00000465354.5_1_1:8022845-8031070:+|nuORF', 'ENST00000460192.5_1_1:8022845-8029412:+|nuORF'] 128780 16884 VPYPPLLRA True PC9_epitope_Rep4 1024.6069514383598 1024.60584993586 72.929 2 0.12678656231518376 0.0009763336717956729 0.005157041827088503 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 104356 18348 SQISDTSVVL True PC9_epitope_Rep5 1047.5448046742702 1047.54370993586 75.592 2 0.12678449817736095 0.0009763336717956729 0.005157285794960803 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 49204 4637 KEMPTVAQA True NCI_RA007_Epitope_Rep5 973.4902670036098 973.48916993586 24.514 2 0.12677436791481694 0.0009763336717956729 0.005158483291403149 ['RASL12|p.K239N|1|0.28|ENSG00000103710|chr15:65054983-65054983|C/A|missense_variant', 'nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 121874 13898 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 65.297 2 0.12676411704398344 0.0009763336717956729 0.005159695322815084 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 6889 10350 AQIEGGVHGL True PC9_epitope_Rep1 979.50869394907 979.50758993586 44.692 2 0.12676082792169124 0.0009763336717956729 0.005160084277754619 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 91918 6872 RKLLQQIRL True NCI_RA007_Epitope_Rep3 1166.7611606639798 1166.75950490379 34.14 3 0.12675992024418908 0.0009763336717956729 0.0051601916201658195 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 103373 3169 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 16.216 2 0.12675775039186593 0.0009763336717956729 0.0051604482369094155 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 27352 17382 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55750993586 72.154 2 0.1267513612673207 0.0009763336717956729 0.00516120391700871 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 1988 12073 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47456993586 51.603 2 0.1267497736796 0.0009763336717956729 0.00516139170738654 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 95734 20428 RYGNTPFLF True PC9_epitope_Rep5 1113.56072952193 1113.5596299358601 83.613 2 0.12674655455786876 0.0009763336717956729 0.005161772506991924 ['ENSG00000188419|ENST00000357749|CHM'] 121786 10540 VFPDKGYSF True NCI_RA007_Epitope_Rep3 1058.5072969667401 1058.5061899358602 48.516 2 0.1267462942005582 0.0009763336717956729 0.005161803306647985 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 77430 13674 NSLKQLYTV True PC9_epitope_Rep2 1064.5866099165999 1064.58550993586 57.887 2 0.12673999089376228 0.0009763336717956729 0.005162549028046615 ['ENSG00000135372|ENST00000257829|NAT10', 'NAT10|p.D856Tfs*36|1|0.2|ENSG00000135372|chr11:34140542-34140542|G/-|frameshift_variant', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 99334 8918 SHSSFQASL True PC9_epitope_Rep2 962.44575933934 962.44466993586 39.661 2 0.12673871894311278 0.0009763336717956729 0.005162699520746095 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 32759 9229 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.46030993586 40.84 2 0.12673587776537457 0.0009763336717956729 0.005163035694396748 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 98941 17714 SHALVTLTL True PC9_epitope_Rep4 953.5545815123301 953.55348993586 76.162 2 0.1267353437493899 0.0009763336717956729 0.005163098882601206 ['nc|ENSG00000167702|Q96AC6|KIFC2', 'KIFC2|p.S598C|1|0.19|ENSG00000167702|chr8:144472638-144472638|C/G|missense_variant', 'ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2'] 76977 19345 NRFLGDYVV True PC9_epitope_Rep1 1081.55564414149 1081.5545499358602 79.215 2 0.1267312065850997 0.0009763336717956729 0.005163588444203942 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 40470 6066 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 28.728 2 0.12672361262733964 0.0009763336717956729 0.005164487175931853 ['ENSG00000127948|ENST00000461988|POR'] 2642 8236 AESIDNPLHEA True H1975_Epitope_Rep3 1194.55168095986 1194.5505899358602 36.663 2 0.12671993474945664 0.0009763336717956729 0.0051649225015977995 ['ENSG00000134996|ENST00000346234|OSTF1'] 139407 21286 YLPDSLTQL True PC9_epitope_Rep1 1048.54407639828 1048.5429699358601 86.702 2 0.1266956051296324 0.0009763336717956729 0.005167803142559276 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 19063 20343 ELFTGFIKV True PC9_epitope_Rep4 1052.5906326678798 1052.5895299358601 86.395 2 0.1266723618555866 0.0009763336717956729 0.005170556632746851 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64897669-64899838:-|nuORF'] 105223 14198 SRIDIANTL True PC9_epitope_Rep2 1001.5505587610501 1001.54946993586 59.88 2 0.1266721061768498 0.0009763336717956729 0.005170586929468829 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 121832 14635 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 68.21 2 0.12667144592561347 0.0009763336717956729 0.005170665166926093 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 139126 21332 YLDPSVLSGV True PC9_epitope_Rep5 1048.54407639828 1048.54357496793 87.11 1 0.12665897481221194 0.0009763336717956729 0.0051721431684650454 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 135413 17005 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.5550749037902 70.568 3 0.12664458560700556 0.0009763336717956729 0.005173849006081388 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 41614 10488 IADRPLYL True H1975_Epitope_Rep2 959.54401682863 959.54290993586 45.36 2 0.12664017712075218 0.0009763336717956729 0.00517437174183126 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5'] 62646 13546 LLLEVISGER True NCI_RA007_Epitope_Rep1 1127.65502382959 1127.65392993586 56.7 2 0.12664016932242927 0.0009763336717956729 0.005174372666562438 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'ACTN2|p.P167Lfs*5|1|0.05|ENSG00000077522|chr1:236725983-236725983|C/-|frameshift_variant', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 105329 17137 SRPPLLGF True PC9_epitope_Rep4 885.50723739709 885.50614993586 73.923 2 0.12663391423184653 0.0009763336717956729 0.005175114452311439 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 85775 16610 QHDPETSVLVL True PC9_epitope_Rep4 1236.635016661 1236.6339099358602 71.866 2 0.12663262189666144 0.0009763336717956729 0.005175267722228143 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 114804 19155 TQLGPPYHIL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 78.717 2 0.12662832972958787 0.0009763336717956729 0.005175776801779875 ['ENSG00000119616|ENST00000341162|FCF1'] 65792 13230 LSDIGLEY True H1975_Epitope_Rep2 908.44911338428 908.4485649679301 56.017 1 0.12662779718062367 0.0009763336717956729 0.005175839969055766 ['ENSG00000101126|ENST00000621696|ADNP'] 21854 8026 ESDAPGPVY True H1975_Epitope_Rep2 933.40797684829 933.4074249679301 35.82 1 0.12662578747973624 0.0009763336717956729 0.005176078352696106 ['ENSG00000142207|ENST00000382751|URB1'] 88895 9780 QVEEELTHLQK True PC9_epitope_Rep5 1352.6935941662798 1352.69194490379 42.589 3 0.1266203608469357 0.0009763336717956729 0.005176722094609819 ['nc|ENSG00000167460|P67936-2|TPM4'] 104054 4707 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44466993586 23.157 2 0.1266183604862598 0.0009763336717956729 0.005176959410020595 ['ENSG00000130935|ENST00000253247|NOL11'] 73329 9484 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4690749679298 41.4 1 0.1266012905017464 0.0009763336717956729 0.00517898496447507 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 73043 18544 MRDPIRILV True PC9_epitope_Rep1 1111.65358436095 1111.65248993586 76.119 2 0.1265970029440358 0.0009763336717956729 0.005179493855867219 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 84841 4791 QEALAKGDVTA True H1975_Epitope_Rep3 1101.56660274801 1101.56550993586 23.555 2 0.12659686142392287 0.0009763336717956729 0.005179510653764778 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2'] 138508 18474 YHSFVSSVF True PC9_epitope_Rep4 1071.5025459394699 1071.5014499358601 79.131 2 0.12658924249053047 0.0009763336717956729 0.00518041507103987 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 128482 5664 VPSLQGEKA True PC9_epitope_Rep4 927.5025459394699 927.50144993586 28.59 2 0.1265876666013623 0.0009763336717956729 0.005180602158749626 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 9531 3813 AVYDRPGASPK True NCI_RA007_Epitope_Rep2 1159.5985715826298 1159.59691490379 19.465 3 0.1265813451996806 0.0009763336717956729 0.005181352694793795 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 76293 13762 NPNQYNYIA True PC9_epitope_Rep1 1095.49852318819 1095.49742993586 57.78 2 0.12657755766368403 0.0009763336717956729 0.005181802437694145 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 80559 6160 PGPPPPPPP True NCI_RA007_Epitope_Rep5 851.45413919507 851.45304993586 30.373 2 0.12657273562027943 0.0009763336717956729 0.005182375076426118 ['ENST00000375142.5_2_1:19811931-19811970:-|nuORF', 'ENST00000584336.1_1_17:37686825-37687566:+|nuORF', 'ENSG00000125966|ENST00000246186|MMP24', 'ENSG00000099822|ENST00000251287|HCN2', 'ENSG00000182742|ENST00000332503|HOXB4', 'nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3', 'ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'FOXK1|p.R191Pfs*113|1|0.14|ENSG00000164916|chr7:4740844-4740845|-/T|frameshift_variant', 'ENSG00000136928|ENST00000259455|GABBR2', 'ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12'] 11817 15988 DHFNAMTSL True PC9_epitope_Rep2 1034.4491304676199 1034.4480299358602 66.751 2 0.12656228086164695 0.0009763336717956729 0.005183616838068246 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 31594 9170 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep3 933.4113483570098 933.41024993586 40.262 2 0.1265516415068615 0.0009763336717956729 0.005184880824934458 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 37596 12862 GVVPTIQKV True PC9_epitope_Rep5 939.5753169569098 939.57420993586 54.482 2 0.12655012202488655 0.0009763336717956729 0.005185061368582839 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 8174 9357 ATETQPIVY True H1975_Epitope_Rep1 1020.5127762699997 1020.51166993586 40.899 2 0.1265389938948146 0.0009763336717956729 0.005186383792319506 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 28197 13945 FREDSTLAL True PC9_epitope_Rep4 1050.53457434374 1050.53346993586 61.544 2 0.12653221265998552 0.0009763336717956729 0.005187189810257184 ['ENSG00000197077|ENST00000358431|KIAA1671'] 140937 11653 YSESSQLLY True H1975_Epitope_Rep2 1088.50260550912 1088.50207496793 49.893 1 0.1265278241061459 0.0009763336717956729 0.005187711499538399 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 38317 5672 HEGPGSELP True H1975_Epitope_Rep2 921.4192102383299 921.41810993586 26.814 2 0.12652652946779483 0.0009763336717956729 0.00518786540949326 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1'] 90673 5719 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 26.996 2 0.12652310138158582 0.0009763336717956729 0.005188272970894174 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 127663 8702 VPAGGAVAV True PC9_epitope_Rep6 739.42283906679 739.42229496793 43.324 1 0.12652308638991686 0.0009763336717956729 0.005188274753306236 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 74255 5292 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 25.411 2 0.12651640512264253 0.0009763336717956729 0.005189069172417163 ['ENSG00000167658|ENST00000309311|EEF2'] 25759 10805 FETEFNTQP True H1975_Epitope_Rep3 1111.48220441771 1111.48110993586 46.64 2 0.12650931881152985 0.0009763336717956729 0.005189911882715331 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 39437 5327 HKVPGDVSL True NCI_RA007_Epitope_Rep5 950.5185303567799 950.51742993586 27.183 2 0.1265024832608612 0.0009763336717956729 0.005190724899653309 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 9805 9124 AYLEAHETF True NCI_RA007_Epitope_Rep4 1079.4923751785898 1079.4912699358601 41.936 2 0.12649505454156978 0.0009763336717956729 0.005191608609527405 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 58581 8053 LEQPTDPVA True H1975_Epitope_Rep1 968.4814761417199 968.48092496793 35.92 1 0.12648574450352743 0.0009763336717956729 0.005192716326917985 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 109010 18323 TAIAGLTFL True H1975_Epitope_Rep1 905.52221875489 905.52167496793 76.36 1 0.12647399016557806 0.0009763336717956729 0.005194115200849704 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 85812 11369 QHDPYITSI True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 54.777 2 0.12647256719494365 0.0009763336717956729 0.005194284572493411 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 48907 15259 KEDPFVFIP True H1975_Epitope_Rep1 1090.5698972233 1090.5688099358601 63.958 2 0.12646973351629412 0.0009763336717956729 0.005194621872347334 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 65123 9974 LQNEPLPERL True NCI_RA007_Epitope_Rep2 1207.6560864587498 1207.6549899358602 43.424 2 0.1264656545911389 0.0009763336717956729 0.005195107434753011 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 31657 8629 GEFRQGLISA True NCI_RA007_Epitope_Rep3 1076.56145779792 1076.56036993586 41.017 2 0.12646542378367306 0.0009763336717956729 0.005195134911810361 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 105672 16569 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.5113499358602 69.108 2 0.12646271844206294 0.0009763336717956729 0.005195456986665875 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 49309 4881 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 23.86 2 0.12646197746291482 0.0009763336717956729 0.0051955452047308375 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 107856 14574 SVVGQIAKL True PC9_epitope_Rep4 913.5596668927699 913.55856993586 63.976 2 0.12645911694894782 0.0009763336717956729 0.005195885780074722 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 125273 19286 VILPKFTAV True PC9_epitope_Rep2 986.6164534929 986.61534993586 79.558 2 0.12645753517547176 0.0009763336717956729 0.005196074116844237 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 45677 15326 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6744449037901 64.232 3 0.12645615389318035 0.0009763336717956729 0.005196238587242506 ['ENSG00000136628|ENST00000366923|EPRS1'] 109974 15401 TEIDSIPPLP True H1975_Epitope_Rep2 1080.5702911461199 1080.56918993586 64.399 2 0.12645566241113917 0.0009763336717956729 0.005196297109638728 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2'] 6851 17684 AQGGVLPNI True PC9_epitope_Rep4 867.48141657207 867.48030993586 76.045 2 0.12645183404459942 0.0009763336717956729 0.00519675298808307 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 14914 16837 DYAYLREHF True PC9_epitope_Rep5 1212.5563724174797 1212.55471490379 69.772 3 0.1264464483264539 0.0009763336717956729 0.005197394381015522 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 91403 18792 RHIEIFTDL True PC9_epitope_Rep1 1142.6084079903399 1142.60730993586 77.068 2 0.1264433016461863 0.0009763336717956729 0.005197769159661916 ['ENSG00000079246|ENST00000392132|XRCC5'] 105398 18225 SRSETFLLL True PC9_epitope_Rep6 1064.5866099165999 1064.58550993586 82.745 2 0.12643012579058208 0.0009763336717956729 0.005199338729953611 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A'] 84377 12007 QAADLAYQL True NCI_RA007_Epitope_Rep3 991.4974605590301 991.49636993586 54.354 2 0.1264248348466092 0.0009763336717956729 0.005199969143151514 ['ENSG00000147113|ENST00000398000|DIPK2B'] 133132 19052 VVQPLLVSV True PC9_epitope_Rep6 952.5957180483199 952.59462993586 85.927 2 0.12642164546258872 0.0009763336717956729 0.00520034919282648 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 39712 5391 HLTGEFEK True PC9_epitope_Rep5 959.47124581119 959.47014993586 25.749 2 0.12642058873360185 0.0009763336717956729 0.005200475119551794 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 90054 4557 RDYVAPTA True NCI_RA007_Epitope_Rep5 891.4450310633499 891.44392993586 24.187 2 0.1264159810573004 0.0009763336717956729 0.005201024235320537 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 75830 16573 NLPDEIYHV True PC9_epitope_Rep4 1098.5345743437401 1098.53346993586 71.724 2 0.1264145532637358 0.0009763336717956729 0.005201194402911496 ['ENSG00000148335|ENST00000372483|NTMT1'] 84906 6050 QEDDRQLIA True H1975_Epitope_Rep2 1086.53055159246 1086.5294499358602 28.249 2 0.12640472790171586 0.0009763336717956729 0.005202365559461363 ['ENSG00000137628|ENST00000393743|DDX60'] 44149 5368 IISSIEQK True NCI_RA007_Epitope_Rep1 916.5229470308799 916.52184993586 24.959 2 0.12640099540197927 0.0009763336717956729 0.005202810531160526 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 40471 6155 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 29.068 2 0.1263941389317267 0.0009763336717956729 0.005203628025803391 ['ENSG00000127948|ENST00000461988|POR'] 9360 11153 AVSDGVIKV True PC9_epitope_Rep2 886.5123823471799 886.51128993586 48.226 2 0.1263862104559465 0.0009763336717956729 0.005204573492486687 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 63086 19082 LLQNNLPAV True PC9_epitope_Rep5 980.5654805492 980.56438993586 78.428 2 0.1263813564544995 0.0009763336717956729 0.0052051524128862115 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 137187 12830 YAYDGKDYLA True PC9_epitope_Rep2 1177.5291546101298 1177.52804993586 54.653 2 0.1263803644258642 0.0009763336717956729 0.005205270736577644 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 93114 12363 RPNSLVGITSA True PC9_epitope_Rep1 1113.61422164677 1113.6131299358601 52.413 2 0.1263781639279341 0.0009763336717956729 0.0052055332092285495 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 126346 20743 VLIPKLPQL True PC9_epitope_Rep5 1019.6743027221899 1019.67320993586 84.848 2 0.12637474409007482 0.0009763336717956729 0.005205941149008229 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 142895 18067 YYTTPIYRF True PC9_epitope_Rep4 1222.60225998074 1222.60116993586 77.556 2 0.12637448917051414 0.0009763336717956729 0.0052059715586741315 ['ENSG00000104957|ENST00000221554|YJU2B'] 71823 10659 MEIQVNGGTVA True H1975_Epitope_Rep2 1117.5437591284501 1117.5426699358602 46.024 2 0.12637040550613382 0.0009763336717956729 0.005206458727755525 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000413027.1_1_6:31248141-31248948:+|nuORF'] 74250 5240 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 25.219 2 0.12635940159623443 0.0009763336717956729 0.005207771684396856 ['ENSG00000167658|ENST00000309311|EEF2'] 89329 21145 QWPPDPPLHF True PC9_epitope_Rep3 1232.59784330664 1232.59674993586 86.62 2 0.12635781736708265 0.0009763336717956729 0.005207960737074742 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 31555 11459 GEEDFSLSA True H1975_Epitope_Rep3 953.39780608741 953.39725496793 49.196 1 0.12635538065971882 0.0009763336717956729 0.005208251532684214 ['ENSG00000167565|ENST00000322354|SERTAD3'] 28482 11652 FSDVDSPYY True H1975_Epitope_Rep3 1091.44475627983 1091.44417496793 49.954 1 0.12635247150780293 0.0009763336717956729 0.005208598730493954 ['ENSG00000170779|ENST00000336219|CDCA4'] 74622 18466 NGISDLVKV True PC9_epitope_Rep3 943.53384606775 943.53274993586 76.236 2 0.12634216353473143 0.0009763336717956729 0.005209829136375225 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 67406 6466 LSSPATLNSR True PC9_epitope_Rep2 1044.5563724174801 1044.55526993586 30.284 2 0.12633925063538626 0.0009763336717956729 0.005210176884794007 ['CON__P00761'] 4464 13447 AIVDKVPSV True PC9_epitope_Rep3 926.54368247546 926.54258993586 56.769 2 0.1263385976724123 0.0009763336717956729 0.005210254840095429 ['ENSG00000181789|ENST00000314797|COPG1'] 105294 12632 SRMDGEGQLTL True PC9_epitope_Rep4 1205.5710365054497 1205.56992993586 56.428 2 0.12633530643123947 0.0009763336717956729 0.005210647788987308 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 99188 19169 SHLDYDITL True PC9_epitope_Rep1 1075.5185899264302 1075.51748993586 78.528 2 0.12632980088521617 0.0009763336717956729 0.0052113051738765645 ['ENSG00000163960|ENST00000296328|UBXN7'] 118342 17850 TYMKDLYQL True PC9_epitope_Rep4 1173.5739966275698 1173.57288993586 76.697 2 0.12632332412867034 0.0009763336717956729 0.005212078629509569 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 63 12822 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 54.428 1 0.12631175853927776 0.0009763336717956729 0.0052134600748679535 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 107201 14072 SVIPQIQKV True PC9_epitope_Rep2 1010.6124307416198 1010.61132993586 59.403 2 0.126311221559028 0.0009763336717956729 0.005213524222902401 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 118734 10513 TYVSGTLRF True NCI_RA007_Epitope_Rep3 1042.54474510462 1042.54364993586 48.413 2 0.12630950418221498 0.0009763336717956729 0.005213729387132518 ['ENSG00000134255|ENST00000357172|CEPT1'] 84267 19509 PYNPILGETF True PC9_epitope_Rep6 1149.57062549929 1149.5695299358601 87.703 2 0.1262961408671222 0.0009763336717956729 0.0052153260892562016 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 115638 8218 TRVSQINTL True PC9_epitope_Rep4 1030.5771078620598 1030.5760099358602 39.069 2 0.12629313974537554 0.0009763336717956729 0.005215684741223551 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 27425 22292 FLYPFPLAL True H1975_Epitope_Rep2 1079.60555445603 1079.6044499358602 92.125 2 0.12628856959707305 0.0009763336717956729 0.005216230947729517 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 74233 7175 NEIDAEPPA True H1975_Epitope_Rep3 954.42944056886 954.4288949679301 32.574 1 0.1262833563391929 0.0009763336717956729 0.005216854084756198 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 84283 18367 PYPPPPPEF True PC9_epitope_Rep4 1039.5014833103098 1039.50038993586 78.714 2 0.12627814882245697 0.0009763336717956729 0.005217476608484144 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 104355 18256 SQISDTSVVL True PC9_epitope_Rep5 1047.5448046742702 1047.54370993586 75.236 2 0.126271545923615 0.0009763336717956729 0.005218266045616683 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 113648 16738 TLVYHVVGV True PC9_epitope_Rep3 985.5596668927699 985.55856993586 69.521 2 0.12627095345453687 0.0009763336717956729 0.005218336886461257 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 104701 15548 SQVDRLVAL True PC9_epitope_Rep2 999.5712942056298 999.57018993586 65.079 2 0.12625844116313728 0.0009763336717956729 0.0052198331871773735 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 6394 4949 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 26.606 2 0.12624667195611808 0.0009763336717956729 0.005221241009351259 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 22267 8388 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4494699358602 37.217 2 0.12624492693262943 0.0009763336717956729 0.005221449779241942 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 13987 13285 DRDPTAYAL True PC9_epitope_Rep1 1020.4876241513199 1020.48652993586 55.964 2 0.1262430139591198 0.0009763336717956729 0.005221678651631728 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 49288 7938 KEQVPGFTP True H1975_Epitope_Rep2 1001.5181960036098 1001.51708993586 35.481 2 0.126238530516426 0.0009763336717956729 0.005222215099228889 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 126286 5056 VLIAAHGNSLR True NCI_RA007_Epitope_Rep5 1149.66184054553 1149.66019490379 26.147 3 0.12623633905621953 0.0009763336717956729 0.005222477328919531 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 97610 10075 SEEWADNHLP True H1975_Epitope_Rep2 1196.50981614788 1196.50870993586 43.745 2 0.1262272466729568 0.0009763336717956729 0.00522356545972399 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 87343 9089 QPSEVLRTV True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 42.547 2 0.12622471168316066 0.0009763336717956729 0.005223868874243907 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 77815 14994 NVDAILEEY True H1975_Epitope_Rep1 1064.50260550912 1064.50207496793 62.919 1 0.12622454660923965 0.0009763336717956729 0.005223888632644918 ['ENSG00000123562|ENST00000441076|MORF4L2'] 95563 20132 RWSPVRPLVF True PC9_epitope_Rep3 1255.71896149883 1255.71786993586 82.691 2 0.1262185904987033 0.0009763336717956729 0.00522460159395988 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 28840 15433 FTADPLSL True H1975_Epitope_Rep2 862.4436340810199 862.4430849679301 64.52 1 0.12621836528507951 0.0009763336717956729 0.0052246285544669995 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1', 'ENST00000544721.5_1_11:72396711-72399699:-|nuORF', 'ENST00000465814.5_1_11:72396711-72407721:-|nuORF'] 134508 12510 VYQHLFTRI True PC9_epitope_Rep4 1175.6451278522297 1175.64349490379 55.938 3 0.12621750171556756 0.0009763336717956729 0.005224731934345113 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 78331 18981 NYISGIQTI True PC9_epitope_Rep4 1007.52876068731 1007.52817496793 81.102 1 0.1262175014353646 0.0009763336717956729 0.005224731967889181 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 88811 20738 QTVAWFPLYY True H1975_Epitope_Rep2 1286.6335601090198 1286.6324699358602 85.873 2 0.12621291181534275 0.0009763336717956729 0.0052252814354719224 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 112617 11493 TLETVPLER True PC9_epitope_Rep2 1056.5815245361598 1056.5804299358601 49.531 2 0.12621113656842375 0.0009763336717956729 0.005225493982574388 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 103139 5335 SPHSQVLTA True PC9_epitope_Rep1 938.4821448480599 938.48104993586 25.36 2 0.12620076424218518 0.0009763336717956729 0.0052267360120506435 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 25655 7675 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.4216949679301 34.473 1 0.1261991783046297 0.0009763336717956729 0.005226925944953121 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 29704 21113 FVLPVATQI True PC9_epitope_Rep4 986.58006798418 986.57896993586 89.373 2 0.12619841011485522 0.0009763336717956729 0.0052270179462898985 ['ENSG00000111678|ENST00000229281|C12orf57'] 9481 21785 AVVPGLLEV True PC9_epitope_Rep1 895.5378688190299 895.53676993586 88.626 2 0.1261981736177899 0.0009763336717956729 0.005227046270400219 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 6342 6380 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 29.348 2 0.12618940641962023 0.0009763336717956729 0.005228096381638984 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 103946 16685 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51234993586 72.153 2 0.12618421162972948 0.0009763336717956729 0.005228718697169923 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 73589 8253 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep4 1074.57433136118 1074.5732299358601 39.207 2 0.12618176797826142 0.0009763336717956729 0.005229011462207394 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 104782 20733 SQYEEQFVTL True PC9_epitope_Rep3 1242.5768330785397 1242.5757299358602 85.017 2 0.12618079653237238 0.0009763336717956729 0.0052291278520917184 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 77080 8118 NRLENDGATAL True PC9_epitope_Rep4 1172.5785644140399 1172.57746993586 38.681 2 0.12617901615724667 0.0009763336717956729 0.0052293411671801475 ['ENSG00000100401|ENST00000356244|RANGAP1'] 130101 12998 VSDPLIGGTY True H1975_Epitope_Rep1 1020.5127762699999 1020.51227496793 55.078 1 0.12617606531477543 0.0009763336717956729 0.00522969474025329 ['ENSG00000169359|ENST00000643144|SLC33A1'] 83567 20121 PVAEYFSGV True PC9_epitope_Rep5 967.4650978015899 967.46400993586 82.443 2 0.1261745079681133 0.0009763336717956729 0.005229881352639012 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 65889 13711 LSDPAGAIIY True H1975_Epitope_Rep3 1018.5335117145798 1018.53297496793 58.036 1 0.12616406008547118 0.0009763336717956729 0.005231133461445673 ['ENSG00000178921|ENST00000314666|PFAS'] 44035 18116 IIIPEIQKV True PC9_epitope_Rep4 1051.66413196131 1051.66302993586 77.748 2 0.1261631901349663 0.0009763336717956729 0.005231237732457128 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 142105 12888 YVPETVYRV True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 57.453 2 0.12616011433888644 0.0009763336717956729 0.005231606409287978 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 86319 10077 QITVNDLPVGR True NCI_RA007_Epitope_Rep5 1210.6669854956199 1210.6658899358602 45.397 2 0.12615866518709037 0.0009763336717956729 0.005231780119071234 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 40316 8858 HQQSIPAVL True NCI_RA007_Epitope_Rep5 991.5450794577898 991.5439899358599 40.736 2 0.12615797972312415 0.0009763336717956729 0.005231862287588555 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 104500 20817 SQMPTVIYV True PC9_epitope_Rep1 1036.5263181591597 1036.52577496793 84.9 1 0.12615753471352492 0.0009763336717956729 0.005231915632834221 ['ENSG00000121931|ENST00000369763|LRIF1'] 126044 7020 VLEDSDLK True PC9_epitope_Rep3 917.4705771048499 917.46948993586 32.014 2 0.12615274435117527 0.0009763336717956729 0.005232489908305235 ['ENSG00000044574|ENST00000324460|HSPA5'] 6367 5110 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 26.309 2 0.1261510142941268 0.0009763336717956729 0.005232697325215318 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 89479 19132 QYGGDLTNTF True PC9_epitope_Rep1 1114.49310345458 1114.49200993586 78.383 2 0.12614660828187238 0.0009763336717956729 0.005233225599408145 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 60799 19054 LHSLPIVSM True PC9_epitope_Rep5 995.54738795691 995.54628993586 78.319 2 0.12614659703847786 0.0009763336717956729 0.0052332269475410574 ['ENSG00000125484|ENST00000372146|GTF3C4'] 136851 13338 YADPGVSFY True H1975_Epitope_Rep2 1017.44436235701 1017.44377496793 56.436 1 0.12614177821603106 0.0009763336717956729 0.00523380477711693 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 109740 5071 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 24.588 2 0.12614071221847176 0.0009763336717956729 0.005233932610353231 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 104688 7506 SQTSVAERL True PC9_epitope_Rep5 989.5141732523299 989.51306993586 33.823 2 0.1261400242391255 0.0009763336717956729 0.005234015113694543 ['ENSG00000171456|ENST00000375687|ASXL1'] 2046 14712 AELADVLTEA True H1975_Epitope_Rep2 1030.51825557326 1030.51767496793 61.751 1 0.12613451054917293 0.0009763336717956729 0.0052346763683708 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 120315 13587 VEDWDSFQA True H1975_Epitope_Rep3 1095.45090428943 1095.44980993586 57.545 2 0.1261340686360285 0.0009763336717956729 0.005234729370389545 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 106369 18729 STIAILNSV True PC9_epitope_Rep6 916.5229470308801 916.52184993586 84.682 2 0.12612957068430883 0.0009763336717956729 0.005235268874054149 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 116926 16796 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep5 1178.5641606002998 1178.56306993586 69.614 2 0.12612073817378158 0.0009763336717956729 0.005236328442107226 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 90284 9248 REELSNVLAA True H1975_Epitope_Rep1 1100.5825871653199 1100.5814899358602 40.484 2 0.12611486075002837 0.0009763336717956729 0.005237033627830171 ['ENSG00000130255|ENST00000347512|RPL36'] 141230 9568 YTDAALNY True H1975_Epitope_Rep1 929.41306222873 929.4125149679301 41.726 1 0.12611187644051858 0.0009763336717956729 0.005237391727263501 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 47584 11688 IVVNLTGR True PC9_epitope_Rep1 870.5287011176599 870.52760993586 49.834 2 0.1261072623436533 0.0009763336717956729 0.005237945438803242 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 111157 10788 THGGLVTGL True PC9_epitope_Rep2 853.46576650793 853.46466993586 46.813 2 0.12610562824468632 0.0009763336717956729 0.0052381415515066155 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 99148 12677 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 56.606 2 0.1261029891190506 0.0009763336717956729 0.005238458295434728 ['ENSG00000132646|ENST00000379143|PCNA'] 35718 8811 GTFLEGVAK True NCI_RA007_Epitope_Rep4 920.4967322830398 920.49562993586 40.701 2 0.12610251154892282 0.0009763336717956729 0.005238515614698351 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 17497 7103 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.53465490379 32.29 3 0.12609881861305428 0.0009763336717956729 0.005238958871670138 ['ENSG00000162378|ENST00000294353|ZYG11B'] 108809 4776 SYTSHTNEI True NCI_RA007_Epitope_Rep4 1050.4618033263002 1050.4607099358602 24.806 2 0.12609869406313925 0.0009763336717956729 0.005238973821831553 ['ENSG00000112936|ENST00000313164|C7'] 77788 19322 NTTDIFQTV True PC9_epitope_Rep4 1037.50293986229 1037.5023749679299 82.43 1 0.12609615324189022 0.0009763336717956729 0.005239278814620603 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 98799 18029 SGLLKVWQV True PC9_epitope_Rep6 1028.6018660579198 1028.6007699358602 81.978 2 0.126095809227638 0.0009763336717956729 0.005239320110429527 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 38297 6882 HEFLHEVPA True H1975_Epitope_Rep1 1077.5243440132099 1077.5232499358601 31.514 2 0.12608703721168488 0.0009763336717956729 0.005240373219758569 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 112495 15504 TLDPQTGLFY True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 64.909 2 0.12608623081150366 0.0009763336717956729 0.005240470041173376 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 88892 19006 QVEEELFSV True PC9_epitope_Rep6 1078.51825557326 1078.51714993586 85.75 2 0.12608588234222337 0.0009763336717956729 0.005240511881102892 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 3018 20750 AFMKGVFTF True PC9_epitope_Rep2 1046.5259242363397 1046.52482993586 85.255 2 0.1260856831189176 0.0009763336717956729 0.005240535801548276 ['ENST00000489739.1_1_9:139685858-139686514:+|nuORF', 'TMEM141|p.S28L|1|0.13|ENSG00000244187|chr9:136791739-136791739|C/T|missense_variant', 'ENST00000465017.5_1_9:139685862-139687281:+|nuORF', 'ENSG00000244187|ENST00000290079|TMEM141'] 9538 4095 AVYGGFKSK True NCI_RA007_Epitope_Rep4 955.51271670035 955.51160993586 22.028 2 0.12608025838640077 0.0009763336717956729 0.005241187182274964 ['nc|ENSG00000196616|P00325-2|ADH1B', 'ENSG00000196616|ENST00000305046|ADH1B'] 53774 7642 KSYLMNRL True NCI_RA007_Epitope_Rep4 1023.5535359665099 1023.55242993586 36.049 2 0.12607972160207384 0.0009763336717956729 0.005241251641563187 ['ENSG00000162654|ENST00000355754|GBP4'] 14188 13876 DSDSVPAFY True H1975_Epitope_Rep3 999.4185415319898 999.41797496793 58.683 1 0.12607734255158304 0.0009763336717956729 0.005241537337176964 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 75805 20789 NLNPEFISV True PC9_epitope_Rep2 1031.5287606873098 1031.52766993586 85.406 2 0.12606041348661537 0.0009763336717956729 0.005243570757440336 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 117739 10049 TVVERLVKV True PC9_epitope_Rep6 1041.65462990677 1041.6535299358602 49.234 2 0.12605916422329858 0.0009763336717956729 0.0052437208423068895 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 43755 19476 IHIPIIASV True PC9_epitope_Rep4 961.59605240149 961.59494993586 83.03 2 0.12605795690720928 0.0009763336717956729 0.0052438658916935 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 39294 20871 HIPDVITYL True PC9_epitope_Rep3 1069.58079626017 1069.5796899358602 85.552 2 0.1260570449972888 0.0009763336717956729 0.005243975452997888 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 115394 9724 TRLEETQAL True PC9_epitope_Rep3 1059.5560380643099 1059.5549499358601 42.356 2 0.12605616864445313 0.0009763336717956729 0.005244080744417204 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENST00000466110.5_1_2:74592577-74593714:-|nuORF'] 28117 18593 FRADDTFEAL True PC9_epitope_Rep2 1183.55095268387 1183.54984993586 76.869 2 0.1260524087622986 0.0009763336717956729 0.005244532507615953 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 37882 12505 GYSEHFVEF True NCI_RA007_Epitope_Rep1 1113.47672511445 1113.47562993586 52.622 2 0.12604951683315835 0.0009763336717956729 0.005244880009158214 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 77137 16824 NRPEFITEF True PC9_epitope_Rep6 1151.56112344475 1151.56002993586 77.222 2 0.12604875563150944 0.0009763336717956729 0.005244971480835523 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 109755 8919 TEDPNQLTV True H1975_Epitope_Rep1 1015.4822044177099 1015.4816749679301 39.211 1 0.12604610071747738 0.0009763336717956729 0.005245290527392189 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 128778 18353 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 75.806 2 0.12603966737233285 0.0009763336717956729 0.005246063714879034 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 47386 17848 IVIRGLNTI True PC9_epitope_Rep3 997.62841515893 997.62730993586 73.848 2 0.12603780917845386 0.0009763336717956729 0.0052462870615412 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 28186 19751 FREDMPSIL True PC9_epitope_Rep1 1106.5430308524599 1106.54192993586 80.799 2 0.12603720726516154 0.0009763336717956729 0.005246359410849744 ['ENSG00000125676|ENST00000245838|THOC2'] 45067 10820 IPHSLPGAVAA True PC9_epitope_Rep6 1031.5763795860698 1031.5752899358602 52.467 2 0.12603245454500317 0.0009763336717956729 0.005246930716913794 ['ENSG00000160113|ENST00000291442|NR2F6'] 97442 13274 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 56.16 1 0.12603120550695612 0.0009763336717956729 0.005247080869064047 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 9808 12968 AYLEAHETF True PC9_epitope_Rep2 1079.4923751785898 1079.4912699358601 55.173 2 0.12602551156685107 0.0009763336717956729 0.005247765415125009 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 9428 16807 AVTVMFDKV True PC9_epitope_Rep5 1008.5314035395999 1008.53030993586 69.656 2 0.12601994010548687 0.0009763336717956729 0.00524843532117088 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 6710 8636 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 38.17 2 0.12601441465393853 0.0009763336717956729 0.005249099777922993 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 40198 12584 HQFPFSSAL True NCI_RA007_Epitope_Rep4 1032.50288029264 1032.5017899358602 55.424 2 0.1260143161286299 0.0009763336717956729 0.005249111626718418 ['ENSG00000127249|ENST00000342695|ATP13A4', 'nc|ENSG00000127249|Q4VNC1-2|ATP13A4'] 136058 22237 WRFPGLLL True PC9_epitope_Rep2 1000.5858220709598 1000.58472993586 91.013 2 0.12600971374587214 0.0009763336717956729 0.005249665145139586 ['nc|ENSG00000117335|P15529-2|CD46', 'nc|ENSG00000117335|P15529-4|CD46', 'nc|ENSG00000117335|P15529|CD46', 'nc|ENSG00000117335|P15529-10|CD46', 'nc|ENSG00000117335|P15529-5|CD46', 'nc|ENSG00000117335|P15529-3|CD46', 'nc|ENSG00000117335|P15529-13|CD46', 'ENSG00000117335|ENST00000367042|CD46', 'nc|ENSG00000117335|P15529-6|CD46', 'nc|ENSG00000117335|P15529-8|CD46', 'nc|ENSG00000117335|P15529-14|CD46', 'nc|ENSG00000117335|P15529-12|CD46', 'nc|ENSG00000117335|P15529-7|CD46', 'nc|ENSG00000117335|P15529-9|CD46', 'nc|ENSG00000117335|P15529-15|CD46', 'nc|ENSG00000117335|P15529-16|CD46', 'CD46|p.G243Efs*55|1|0.21|ENSG00000117335|chr1:207767066-207767066|G/-|frameshift_variant', 'ENST00000469535.5_1_1:207925470-207933074:+|nuORF'] 107138 16512 SVIDHIHLI True PC9_epitope_Rep6 1045.59202965021 1045.59092993586 75.947 2 0.12599505402556116 0.0009763336717956729 0.005251428619128327 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 103263 12315 SPLLLQAKA True PC9_epitope_Rep1 939.5753169569099 939.57420993586 52.225 2 0.1259904606151818 0.0009763336717956729 0.005251981297668165 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 34059 23520 GLVPFLVSV True PC9_epitope_Rep5 929.5586042636099 929.55750993586 95.454 2 0.12598876412071527 0.0009763336717956729 0.0052521854340931194 ['ENSG00000182481|ENST00000330459|KPNA2'] 65313 18871 LRDDTSFVF True PC9_epitope_Rep2 1098.53457434374 1098.53346993586 77.952 2 0.1259862949026936 0.0010120669521214481 0.005252482565000749 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 139112 12362 YLDPAQQNLY True H1975_Epitope_Rep1 1223.5822528121503 1223.5811499358601 52.581 2 0.1259821287660882 0.0010120669521214481 0.0052529839303173936 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 48027 15936 IYLPYLHEW True NCI_RA007_Epitope_Rep3 1232.62299542532 1232.62188993586 70.346 2 0.1259759061424415 0.0010120669521214481 0.005253732866869286 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 140573 10700 YRQKQVVIL True PC9_epitope_Rep1 1145.6920780446499 1145.6909899358602 46.048 2 0.12596821861615598 0.0010120669521214481 0.005254658259432257 ['ENSG00000143179|ENST00000367879|UCK2'] 27595 9842 FNPFVTSDR True NCI_RA007_Epitope_Rep3 1081.51925863277 1081.5181699358602 45.785 2 0.12596691778084446 0.0010120669521214481 0.005254814864417304 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 98020 11217 SEQFETVAV True H1975_Epitope_Rep3 1008.4763907612798 1008.47587496793 48.246 1 0.12596439468553228 0.0010120669521214481 0.005255118627916569 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 133131 21062 VVQPLLVSV True PC9_epitope_Rep5 952.5957180483199 952.59516496793 86.075 1 0.1259639408359789 0.0010120669521214481 0.00525517327014139 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 98115 8966 SESFVSPEA True H1975_Epitope_Rep2 951.41854153199 951.4179949679301 39.442 1 0.12596323573287707 0.0010120669521214481 0.005255258163700931 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 54812 7885 KYPDRVPVI True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 38.131 2 0.12596009335288563 0.0010120669521214481 0.005255636518807316 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 132172 10688 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 49.087 2 0.12595849128581083 0.0010120669521214481 0.005255829424370462 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 141926 12954 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.5851099358601 54.903 2 0.1259573609149863 0.0010120669521214481 0.005255965536971877 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 8233 8555 ATGENLPRV True PC9_epitope_Rep2 955.5086939490699 955.50758993586 38.268 2 0.12595697636451753 0.0010120669521214481 0.0052560118430643185 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 106559 7359 STMGYMMAK True NCI_RA007_Epitope_Rep5 1018.4285953471799 1018.42748993586 34.986 2 0.12595650626313862 0.0010120669521214481 0.005256068451412968 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 96432 17092 SAAFPGASL True PC9_epitope_Rep4 819.41266830591 819.41211496793 73.741 1 0.12595544594790506 0.0010120669521214481 0.0052561961339290504 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 12044 14677 DHSPDSLPL True PC9_epitope_Rep5 979.46107505031 979.45996993586 61.46 2 0.12595377307256633 0.0010120669521214481 0.005256397586749079 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 6789 20616 AQEDYLFSV True PC9_epitope_Rep4 1070.49204082542 1070.49094993586 87.453 2 0.12595169660064331 0.0010120669521214481 0.005256647652455036 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 96572 7569 SAFGQAFSK True NCI_RA007_Epitope_Rep4 941.4606811274899 941.45958993586 35.762 2 0.12595042905204773 0.0010120669521214481 0.005256800306745287 ['ENSG00000129696|ENST00000431156|TTI2'] 137030 19534 YALPHAILRL True PC9_epitope_Rep5 1165.69716342509 1165.69552490379 80.189 3 0.1259480427164757 0.0010120669521214481 0.005257087711365996 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 54861 22007 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 89.948 2 0.12594204871255324 0.0010120669521214481 0.005257809683041085 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 60592 7814 LHHDDPEVL True PC9_epitope_Rep1 1073.51417325233 1073.5130699358601 34.881 2 0.1259406800329553 0.0010120669521214481 0.005257974552748641 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 48499 18646 KAIDVVVMV True PC9_epitope_Rep5 972.5677890483199 972.56668993586 76.747 2 0.12593415008592962 0.0010120669521214481 0.005258761213144016 ['nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1', 'ENSG00000204104|ENST00000373327|TRAF3IP1'] 134299 20831 VYNPVIYVF True PC9_epitope_Rep6 1112.5906326678798 1112.5895299358601 92.899 2 0.1259330217739921 0.0010120669521214481 0.005258897152181566 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 104102 19100 SQDYPTLAF True PC9_epitope_Rep6 1040.48147614172 1040.4803699358602 86.118 2 0.12592897911685674 0.0010120669521214481 0.005259384239875123 ['ENSG00000134697|ENST00000373062|GNL2'] 1828 8622 AEIDAHLVA True H1975_Epitope_Rep1 937.48689587533 937.48578993586 38.091 2 0.12592550353621385 0.0010120669521214481 0.0052598030375999305 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 115582 7125 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 34.679 2 0.12592329851235776 0.0010120669521214481 0.005260068753757167 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 74138 6614 NEDGAEATLA True H1975_Epitope_Rep3 989.43016884485 989.4296249679301 30.394 1 0.12592122615366705 0.0010120669521214481 0.0052603184951187055 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 78320 12940 NYISGIQTI True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 58.173 2 0.12591280724771362 0.0010120669521214481 0.00526133318286137 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 111078 12681 THDLVGPEL True PC9_epitope_Rep4 979.49746055903 979.49636993586 56.624 2 0.12591077204494194 0.0010120669521214481 0.005261578504279409 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 36025 17454 GTYTGFIKV True PC9_epitope_Rep3 984.5280324113198 984.52692993586 72.312 2 0.12591059866494175 0.0010120669521214481 0.00526159940385947 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 4173 17392 AHTTVIIDL True PC9_epitope_Rep5 981.5494961318899 981.54838993586 71.9 2 0.12590953545217393 0.0010120669521214481 0.0052617275674836225 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 73822 18126 NALDKVLSV True PC9_epitope_Rep2 957.54949613189 957.54838993586 75.024 2 0.12589903051073012 0.0010120669521214481 0.00526299403686853 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 97862 11711 SELPTTVTV True H1975_Epitope_Rep2 945.50187723313 945.50132496793 50.121 1 0.12589546637834376 0.0010120669521214481 0.005263423794457746 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 52674 20163 KLVGEFLEV True PC9_epitope_Rep5 1032.5855472874398 1032.5844499358602 82.605 2 0.12589485143511453 0.0010120669521214481 0.005263497946846986 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 17293 15631 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 65.135 2 0.125892799257165 0.0010120669521214481 0.005263745414340302 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 140442 15909 YRGQFPEL True PC9_epitope_Rep5 1008.5028802926398 1008.50178993586 66.186 2 0.1258872066018651 0.0010120669521214481 0.005264419877927342 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 62040 15020 LLDSDEPLVY True H1975_Epitope_Rep3 1162.57577044938 1162.57517496793 63.165 1 0.12587512413735102 0.0010120669521214481 0.005265877289628448 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 78509 15342 NYPETLGRLLI True NCI_RA007_Epitope_Rep4 1287.7186867153098 1287.7175899358601 66.674 2 0.12587208180834886 0.0010120669521214481 0.0052662443239855795 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 11763 12929 DHDGNIVEL True PC9_epitope_Rep6 1010.46688870674 1010.46578993586 61.272 2 0.1258710238727551 0.0010120669521214481 0.005266371961924514 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 95939 13356 RYLEKPMEI True PC9_epitope_Rep3 1177.6165301458898 1177.61488490379 56.407 3 0.12586832641927662 0.0010120669521214481 0.005266697418346683 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 40544 11656 HRFPTVAV True PC9_epitope_Rep1 925.5133854066898 925.5122899358599 49.712 2 0.12586671259767823 0.0010120669521214481 0.005266892140537706 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 67405 7410 LSSPATLNSR True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 33.316 2 0.12586504301965906 0.0010120669521214481 0.005267093597679263 ['CON__P00761'] 76376 14605 NQAKYIPEL True PC9_epitope_Rep2 1074.57095985246 1074.5698699358602 61.447 2 0.12586159241651185 0.0010120669521214481 0.005267509983520027 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 23765 21568 EYGPIHILW True PC9_epitope_Rep5 1126.5811306133398 1126.58002993586 88.001 2 0.12585613311165894 0.0010120669521214481 0.005268168826269444 ['ENSG00000162627|ENST00000306121|SNX7', 'nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7'] 99410 3927 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 21.301 2 0.12585439024773826 0.0010120669521214481 0.005268379176530061 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 21521 19662 ERMGLAISL True PC9_epitope_Rep5 988.5375515491999 988.53644993586 80.686 2 0.12585364897233087 0.0010120669521214481 0.005268468645263834 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 10048 8957 AYSRVQYQF True NCI_RA007_Epitope_Rep4 1160.5614577979202 1160.56036993586 41.289 2 0.12585256237976183 0.0010120669521214481 0.005268599794978601 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 23978 13142 EYMEHVYLI True NCI_RA007_Epitope_Rep3 1195.5583465634297 1195.55724993586 58.968 2 0.1258347247536493 0.0010120669521214481 0.005270753221407587 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 108604 14019 SYPDNFLHI True NCI_RA007_Epitope_Rep5 1104.52400966004 1104.52290993586 60.616 2 0.12583454024846838 0.0010120669521214481 0.005270775500089936 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 85769 7587 QHDPETSVL True PC9_epitope_Rep4 1024.48253877088 1024.4814499358602 36.563 2 0.1258339573168293 0.0010120669521214481 0.005270845888686904 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 108816 19097 SYVAGLPRF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 78.486 2 0.12582765049584518 0.0010120669521214481 0.005271607491974548 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF'] 140231 18100 YQYLLVTAL True NCI_RA007_Epitope_Rep4 1082.60119735158 1082.60010993586 78.319 2 0.1258241853108516 0.0010120669521214481 0.0052720259890448595 ['ENSG00000165389|ENST00000298130|SPTSSA'] 14104 21176 DRYQYPFVL True PC9_epitope_Rep5 1199.5975089534697 1199.59640993586 86.503 2 0.12582235293695185 0.0010120669521214481 0.0052722473015468976 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 128074 11937 VPLAIVNKA True PC9_epitope_Rep5 923.58040233735 923.57930993586 50.913 2 0.1258211141558944 0.0010120669521214481 0.005272396925593168 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 17860 15200 EHVLTTVTL True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 63.728 2 0.1258187777795108 0.0010120669521214481 0.005272679132146765 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 117291 14187 TVMDSKIVQV True PC9_epitope_Rep2 1118.60054572858 1118.59997496793 59.839 1 0.12581504791536485 0.0010120669521214481 0.005273129686205495 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 103409 8405 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 37.166 2 0.12581241197273865 0.0010120669521214481 0.0052734481212911195 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 18129 12897 EIIRQLNGV True PC9_epitope_Rep2 1040.59784330664 1040.59674993586 54.906 2 0.12581097877728178 0.0010120669521214481 0.005273621266405275 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 88680 7453 QTETHNVFY True H1975_Epitope_Rep3 1137.50908787189 1137.50798993586 33.646 2 0.12581070428796104 0.0010120669521214481 0.005273654428244137 ['nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1'] 40388 4170 HQVEQTEL True NCI_RA007_Epitope_Rep3 982.4719740871799 982.47086993586 23.019 2 0.12580209716149054 0.0010120669521214481 0.005274694383566428 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 97963 10610 SENPSVYVP True NCI_RA007_Epitope_Rep5 990.4658260775799 990.4652749679301 47.449 1 0.12579972045935106 0.0010120669521214481 0.005274981583845597 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 90820 9095 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 39.934 2 0.1257988686885267 0.0010120669521214481 0.00527508451542017 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 120498 5760 VEFATHEEA True NCI_RA007_Epitope_Rep4 1031.4559896698697 1031.4548899358601 28.776 2 0.12579325294890856 0.0010120669521214481 0.005275763194374632 ['ENSG00000169813|ENST00000682386|HNRNPF'] 115788 9088 TSDETTLEY True H1975_Epitope_Rep3 1057.44515020265 1057.4440499358602 39.944 2 0.12579200284479747 0.0010120669521214481 0.005275914284857418 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 36416 18965 GVFPDNFVKL True PC9_epitope_Rep6 1134.60734536118 1134.6062499358602 85.594 2 0.12579088232295188 0.0010120669521214481 0.005276049717334701 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 42444 8058 IEDVPAPST True H1975_Epitope_Rep3 927.45492704071 927.4543749679301 35.969 1 0.12578563398752313 0.0010120669521214481 0.005276684105627043 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF'] 132539 10700 VVDPNQVNV True PC9_epitope_Rep6 982.5083595959001 982.50726993586 51.97 2 0.1257851529080477 0.0010120669521214481 0.0052767422594626814 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 21356 22562 ERFSLIFTL True PC9_epitope_Rep1 1124.62299542532 1124.62188993586 91.59 2 0.1257847266856392 0.0010120669521214481 0.00527679378259318 ['ENST00000528098.5_1_11:57182763-57193651:-|nuORF', 'ENSG00000134802|ENST00000395124|SLC43A3', 'nc|ENSG00000134802|Q8NBI5-2|SLC43A3'] 57824 7278 LEESSPKLP True H1975_Epitope_Rep1 998.5284263341399 998.5273299358599 33.006 2 0.12578027203475386 0.0010120669521214481 0.005277332304601511 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000544007.5_1_14:31028384-31077115:+|nuORF', 'G2E3|p.T361Ifs*2|1|0.42|ENSG00000092140|chr14:30605575-30605576|-/T|frameshift_variant', 'G2E3|p.G461Vfs*26|1|0.4|ENSG00000092140|chr14:30607950-30607950|G/-|frameshift_variant'] 36832 9200 GVLGPIINK True NCI_RA007_Epitope_Rep5 909.56475227321 909.56364993586 42.038 2 0.1257787360633995 0.0010120669521214481 0.005277518000424116 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000523568.1_7:102228019-102246337:-|nuORF'] 61099 21693 LIIDEIHLL True PC9_epitope_Rep2 1077.64339651673 1077.6422899358602 88.92 2 0.12576280310211752 0.0010120669521214481 0.00527944464130075 ['ENSG00000112249|ENST00000369162|ASCC3'] 90077 5369 REAEFTKSIA True NCI_RA007_Epitope_Rep4 1150.59823722946 1150.5965849037902 27.218 3 0.1257625549538791 0.0010120669521214481 0.005279474653265515 ['ENSG00000118363|ENST00000263672|SPCS2'] 7155 6224 AQYEDIANR True PC9_epitope_Rep4 1078.5043368446197 1078.5032299358602 30.988 2 0.12575423954874942 0.0010120669521214481 0.005280480445863127 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 7605 17288 ASFNDTFVHV True PC9_epitope_Rep4 1135.5298233164701 1135.5287299358602 74.501 2 0.1257540440421133 0.0010120669521214481 0.005280504095694994 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 41212 21160 HVLDTLIQL True PC9_epitope_Rep3 1050.60734536118 1050.6062499358602 86.677 2 0.12574982416840524 0.0010120669521214481 0.005281014586066015 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 124747 10817 VHAQIVSTL True PC9_epitope_Rep4 966.5498304850599 966.54872993586 49.367 2 0.12574693654599647 0.0010120669521214481 0.005281363938029444 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 12770 20272 DLENAFLNL True H1975_Epitope_Rep1 1047.52367530687 1047.52256993586 84.324 2 0.1257418285967861 0.0010120669521214481 0.0052819819663448234 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 114771 5786 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.54912993586 28.942 2 0.1257353732197098 0.0010120669521214481 0.005282763126073675 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 139992 21402 YQDPSVLYI True PC9_epitope_Rep1 1096.54407639828 1096.5429699358601 87.157 2 0.1257337906285179 0.0010120669521214481 0.005282954651394383 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 61179 19684 LILDPIFKV True PC9_epitope_Rep6 1056.65831830488 1056.6572299358602 88.373 2 0.125721157164604 0.0010120669521214481 0.005284483798514076 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 115832 9134 TSDTLNNVGY True H1975_Epitope_Rep2 1082.48801807414 1082.4869299358602 40.087 2 0.1257092117130372 0.0010120669521214481 0.005285930068379436 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 90347 12403 REFPTVPLV True NCI_RA007_Epitope_Rep3 1056.59678067748 1056.59568993586 55.992 2 0.125697833408592 0.0010120669521214481 0.005287308033191621 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 87548 19023 QQLDSKFLEQV True PC9_epitope_Rep1 1333.68778050985 1333.6866899358602 77.962 2 0.12569626125004005 0.0010120669521214481 0.00528749845650268 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 18198 7492 EILSEVER True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 33.814 2 0.12569125785098215 0.0010120669521214481 0.005288104524006445 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 42047 13286 IDIIPNPQER True PC9_epitope_Rep6 1193.64043639461 1193.6393299358601 62.757 2 0.12567634524103238 0.0010120669521214481 0.0052899113099270974 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 139353 21456 YLLPAIVHI True PC9_epitope_Rep5 1037.62735252977 1037.6262499358602 87.576 2 0.12567059964362784 0.0010320311902759728 0.00529060759811931 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 78560 17118 NYQGHFHLF True PC9_epitope_Rep5 1161.5355774032498 1161.53392490379 70.866 3 0.12566388819381913 0.0010320311902759728 0.005291421048316874 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 97774 4549 SEKELEPEA True NCI_RA007_Epitope_Rep4 1030.4818700645399 1030.48076993586 23.901 2 0.12566256113988433 0.0010320311902759728 0.005291581906225911 ['ENSG00000182827|ENST00000366812|ACBD3'] 7723 5131 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46070993586 24.759 2 0.12565476504204862 0.0010320311902759728 0.005292527001608764 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 107002 7277 SVFDSSSDMEK True NCI_RA007_Epitope_Rep3 1230.50743318938 1230.50632993586 35.733 2 0.12565409800361121 0.0010320311902759728 0.005292607872180862 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 18131 13904 EIIRQLNGV True PC9_epitope_Rep3 1040.59784330664 1040.59674993586 58.563 2 0.1256489315340808 0.0010320311902759728 0.005293234286953895 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 9948 22426 AYMQEPLFVEF True PC9_epitope_Rep4 1372.6373251601196 1372.63622993586 94.493 2 0.12564731302911744 0.0010320311902759728 0.005293430539482126 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 14170 9977 DSDPLQDHNMY True H1975_Epitope_Rep3 1333.5244802358502 1333.5233899358602 43.412 2 0.12564554866695077 0.0010320311902759728 0.005293644486120638 ['ENSG00000010404|ENST00000340855|IDS'] 32091 7882 GESSLILKA True NCI_RA007_Epitope_Rep3 916.52294703088 916.52184993586 38.12 2 0.12564268356665953 0.0010320311902759728 0.005293991926386011 ['ENSG00000139567|ENST00000388922|ACVRL1'] 31359 6571 [Acetylation]-GDREQLLQR True H1975_Epitope_Rep3 1155.5996345280898 1155.5985299358601 30.231 2 0.125641555220418 0.0010320311902759728 0.00529412876295963 ['ENSG00000128245|ENST00000248975|YWHAH'] 26223 10553 FHDPDSAVV True PC9_epitope_Rep1 985.4505103666099 985.44940993586 45.482 2 0.12564148428032706 0.0010320311902759728 0.005294137366107684 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 121789 10948 VFPDKGYSF True NCI_RA007_Epitope_Rep4 1058.5072969667401 1058.5061899358602 48.976 2 0.12564060670184396 0.0010320311902759728 0.005294243794193343 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 62621 20875 LLLDVPTAAV True PC9_epitope_Rep4 1010.6011973515799 1010.6006749679301 88.451 1 0.12563847595860003 0.0010320311902759728 0.00529450220821948 ['ENSG00000216490|ENST00000407280|IFI30'] 132173 10779 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 49.443 2 0.12563435005392912 0.0010320311902759728 0.005295002628243745 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 77863 17010 NVFDEAVRV True PC9_epitope_Rep4 1047.53490869691 1047.53380993586 73.422 2 0.12563238258895879 0.0010320311902759728 0.00529524127318338 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000475867.5_1_10:5963439-5965826:+|nuORF'] 8477 6477 ATQTQFFHVK True NCI_RA007_Epitope_Rep3 1205.61930702721 1205.61766490379 32.509 3 0.12562954206989393 0.0010320311902759728 0.005295585834397255 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16', 'nc|ENSG00000163564|Q6K0P9-4|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-2|PYHIN1', 'ENST00000485134.1_1_1:158911778-158914889:+|nuORF', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1'] 24129 23945 EYPFILDAF True PC9_epitope_Rep3 1113.5382627418498 1113.5371699358602 97.391 2 0.12561574894633154 0.0010320311902759728 0.005297259283342203 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 140127 15101 YQQQQSLAL True PC9_epitope_Rep1 1077.54547338061 1077.54436993586 62.905 2 0.12561409199839982 0.0010320311902759728 0.005297460347233226 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 118004 11669 TYDYNFHSF True NCI_RA007_Epitope_Rep4 1192.48253877088 1192.4814499358602 51.844 2 0.12561353075375273 0.0010320311902759728 0.005297528453685212 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 7162 4755 AQYEDIAQK True NCI_RA007_Epitope_Rep3 1064.5138388991597 1064.51274993586 25.66 2 0.12560415271112882 0.0010320311902759728 0.005298666596450286 ['ENSG00000167768|ENST00000252244|KRT1'] 135722 20952 WLVDHVYAI True PC9_epitope_Rep3 1114.5811306133398 1114.58002993586 85.87 2 0.12560323595623568 0.0010320311902759728 0.005298777868990995 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000529672.1_1_11:111613245-111618714:-|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 8933 13856 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6965849037902 58.318 3 0.12560293483874693 0.0010320311902759728 0.005298814418091208 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 56863 19612 LDPHLVLDQLR True PC9_epitope_Rep5 1317.7404847890498 1317.73882490379 80.49 3 0.1255999605304925 0.0010320311902759728 0.005299175447572357 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 104368 21248 SQITSLVTL True PC9_epitope_Rep1 960.54916177872 960.54806993586 86.553 2 0.1255970076251169 0.0010320311902759728 0.005299533902983063 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 48020 14137 IYLLIHNNF True NCI_RA007_Epitope_Rep5 1145.62332977849 1145.62222993586 61.067 2 0.1255951749435738 0.0010320311902759728 0.005299756385538778 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 128222 13654 VPNKFLVTA True PC9_epitope_Rep5 987.5753169569099 987.57420993586 57.543 2 0.1255858066482533 0.0010320311902759728 0.005300893814236264 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 28619 9469 FSHYMEENL True NCI_RA007_Epitope_Rep5 1168.4859098991599 1168.48480993586 43.057 2 0.12558192719591965 0.0010320311902759728 0.005301364898571514 ['ENSG00000145632|ENST00000274289|PLK2'] 7584 2609 ASFDKAKLK True NCI_RA007_Epitope_Rep3 1006.58113061334 1006.58002993586 14.732 2 0.12557919909704038 0.0010320311902759728 0.0053016961979244865 ['ENSG00000034510|ENST00000233143|TMSB10'] 21705 16737 ERSNDYFVL True PC9_epitope_Rep6 1141.54038800017 1141.53928993586 76.868 2 0.12557741375497494 0.0010320311902759728 0.005301913020220424 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 40758 18642 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.55843490379 76.926 3 0.12557488767968703 0.0010320311902759728 0.0053022198163145675 ['ENSG00000169813|ENST00000682386|HNRNPF'] 134613 21581 VYSLQQFGF True PC9_epitope_Rep4 1087.53384606775 1087.53274993586 91.194 2 0.12557388890534077 0.0010320311902759728 0.005302341123942936 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 109321 21346 TAYDNFVEL True PC9_epitope_Rep1 1070.49204082542 1070.49094993586 86.938 2 0.12556961770906286 0.0010320311902759728 0.005302859919172724 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 41028 20448 HTILDLPAV True PC9_epitope_Rep1 977.55458151233 977.55348993586 83.463 2 0.12555861711322802 0.0010320311902759728 0.005304196321314283 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 33080 10112 GINVTDFTR True H1975_Epitope_Rep3 1021.51925863277 1021.51816993586 43.937 2 0.12555783621606764 0.0010320311902759728 0.005304291200789944 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 34715 6549 GQEDHYNNL True PC9_epitope_Rep1 1088.45230127176 1088.45120993586 29.996 2 0.1255570684175796 0.0010320311902759728 0.0053043844903920305 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 40859 11324 HSELLEDYY True H1975_Epitope_Rep2 1167.50841916555 1167.50732993586 48.606 2 0.1255561260004772 0.0010320311902759728 0.00530449899883005 ['ENSG00000117528|ENST00000370214|ABCD3'] 103995 22286 SQDAGIWYL True PC9_epitope_Rep5 1051.49746055903 1051.49636993586 90.729 2 0.12555049313936611 0.0010320311902759728 0.0053051834704631795 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 8314 15886 ATINEVVQV True PC9_epitope_Rep6 971.52876068731 971.52766993586 73.384 2 0.12554842529861218 0.0010320311902759728 0.005305434763856525 ['ENSG00000171940|ENST00000371471|ZNF217'] 32004 5587 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 26.53 1 0.1255472513734799 0.0010320311902759728 0.005305577429761806 ['ENSG00000108344|ENST00000264639|PSMD3'] 78074 20697 NVVEQFLQA True PC9_epitope_Rep4 1046.53965972418 1046.53856993586 87.772 2 0.1255458769165956 0.0010320311902759728 0.005305744470865101 ['ENSG00000121060|ENST00000316881|TRIM25'] 8045 6773 ATDPNILGR True NCI_RA007_Epitope_Rep5 955.50869394907 955.50758993586 32.735 2 0.12554253667547688 0.0010320311902759728 0.005306150440030156 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 53447 9447 KRFDDKYTL True PC9_epitope_Rep1 1184.6189726740397 1184.61733490379 41.194 3 0.12554194284162626 0.0010320311902759728 0.005306222617121052 ['ENSG00000118363|ENST00000263672|SPCS2'] 21286 15948 ERDYTGYVL True PC9_epitope_Rep5 1114.5294889632999 1114.52838993586 66.333 2 0.12553996400753148 0.0010320311902759728 0.005306463139981037 ['ENSG00000116138|ENST00000375847|DNAJC16', 'nc|ENSG00000116138|Q9Y2G8-2|DNAJC16', 'ENST00000475133.5_1_1:15892828-15894669:+|nuORF'] 97506 4979 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 24.235 2 0.12553431262018927 0.0010320311902759728 0.0053071501123583085 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 127052 6022 VLSQQAASVVK True H1975_Epitope_Rep3 1128.65027280232 1128.64916993586 28.177 2 0.1255322670141183 0.0010320311902759728 0.005307398794016523 ['ENSG00000239900|ENST00000623063|ADSL'] 13992 11200 DRDPTAYAL True PC9_epitope_Rep6 1020.4876241513199 1020.48652993586 54.057 2 0.12553016272160697 0.0010320311902759728 0.005307654622034419 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 38111 15371 HAYIISSL True PC9_epitope_Rep2 902.4861675993401 902.48506993586 64.407 2 0.12552959341376105 0.0010320311902759728 0.005307723837350874 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 78518 18927 NYPETLGRLLI True PC9_epitope_Rep6 1287.7186867153098 1287.7175899358601 85.448 2 0.12552524781704621 0.0010320311902759728 0.005308252195533482 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENSG00000103184|ENST00000251170|SEC14L5'] 11786 20196 DHDRFWVL True PC9_epitope_Rep5 1086.52467836638 1086.5235899358602 82.73 2 0.1255246100042798 0.0010320311902759728 0.0053083297481647225 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 104826 13871 SRAFLAQAL True PC9_epitope_Rep6 975.5501648382298 975.54906993586 65.18 2 0.12551894004192318 0.0010320311902759728 0.00530901921642495 ['ENSG00000109133|ENST00000504986|TMEM33'] 27977 20678 FQIIQSIRMGM True PC9_epitope_Rep2 1322.6838985130598 1322.6828099358602 84.974 2 0.12551193468092828 0.0010320311902759728 0.005309871190656649 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 130676 16619 VSTLPAITLK True PC9_epitope_Rep1 1041.64339651673 1041.6422899358602 68.751 2 0.12550621305992415 0.0010320311902759728 0.005310567139175669 ['ENSG00000117984|ENST00000236671|CTSD'] 99025 11051 SHEEAITAL True PC9_epitope_Rep3 969.4767251144499 969.47562993586 47.503 2 0.12550569252172808 0.0010320311902759728 0.005310630459201368 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'BTF3L4-INADL|1|fusion', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 40776 9075 HRVFVNRSL True PC9_epitope_Rep5 1126.63596015086 1126.63432490379 39.851 3 0.12550509366106627 0.0010320311902759728 0.005310703307552553 ['ENSG00000076685|ENST00000404739|NT5C2'] 38509 5083 HERPEFIA True NCI_RA007_Epitope_Rep3 997.4981292653698 997.49702993586 26.987 2 0.1255025276718082 0.0010320311902759728 0.005311015458181443 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 105561 15588 SSDFDPLVY True H1975_Epitope_Rep2 1041.46549172441 1041.46497496793 65.115 1 0.12550055509493188 0.0010320311902759728 0.0053112554328823705 ['nc|ENSG00000108375|Q68DV7-3|RNF43', 'nc|ENSG00000108375|Q68DV7-2|RNF43', 'ENSG00000108375|ENST00000407977|RNF43', 'nc|ENSG00000108375|Q68DV7-4|RNF43'] 132537 11463 VVDPNQVNV True PC9_epitope_Rep4 982.5083595959001 982.50726993586 51.855 2 0.12549986239429659 0.0010320311902759728 0.005311339706203539 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 76663 10977 NQSDTSVSL True PC9_epitope_Rep3 949.43525422529 949.43414993586 47.209 2 0.12549286364068446 0.0010320311902759728 0.00531219124168898 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 21703 19065 ERSNDYFVL True PC9_epitope_Rep5 1141.54038800017 1141.53928993586 78.363 2 0.12549110690997797 0.0010320311902759728 0.005312405003416614 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 14730 10223 DVNAAIAAIK True H1975_Epitope_Rep3 984.5603951687599 984.55928993586 44.37 2 0.12548785206987634 0.0010320311902759728 0.005312801079724245 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A'] 130097 10481 VSDNGPCLGY True H1975_Epitope_Rep2 1023.4331460503099 1023.43257496793 45.333 1 0.12548238829636352 0.0010320311902759728 0.005313466022738094 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 57811 5422 LEERYVPRA True H1975_Epitope_Rep3 1131.6036569630699 1131.6020249037902 25.915 3 0.12548025811248414 0.0010320311902759728 0.005313725288923711 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 115880 9424 TSERGSFSLY True H1975_Epitope_Rep3 1145.53530261973 1145.5342099358602 41.25 2 0.12547398499532467 0.0010320311902759728 0.005314488866519582 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12'] 63786 11455 LNFAVASR True PC9_epitope_Rep1 876.48175092524 876.48064993586 48.939 2 0.12547008531185105 0.0010320311902759728 0.005314963598798313 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 142567 21345 YYLNEIQSF True PC9_epitope_Rep3 1175.5498900547097 1175.54937496793 87.401 1 0.125467253154526 0.0010320311902759728 0.005315308400672629 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 96163 16082 RYPDRITLI True PC9_epitope_Rep3 1145.65569253593 1145.65458993586 67.009 2 0.12546441087971702 0.0010320311902759728 0.005315654456359404 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 105393 7908 SRSDSNFQV True PC9_epitope_Rep1 1038.47303671634 1038.47192993586 35.244 2 0.1254640946282014 0.0010320311902759728 0.005315692962318748 ['ENST00000505131.1_1_4:48384636-48389420:+|nuORF', 'ENSG00000109171|ENST00000264313|SLAIN2'] 8987 9353 AVGLVLPAK True NCI_RA007_Epitope_Rep1 866.5589386167799 866.55784993586 40.374 2 0.12545830304958153 0.0010320311902759728 0.005316398178200167 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 32769 10043 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.4608649679301 43.61 1 0.125455839001607 0.0010320311902759728 0.00531669824265949 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 14360 4380 DSYVGDEAQSK True PC9_epitope_Rep6 1197.51496109797 1197.5138699358602 23.947 2 0.12545238736569603 0.0010320311902759728 0.005317118600581322 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 14150 12043 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 51.403 2 0.1254515999584167 0.0010320311902759728 0.005317214499643793 ['ENSG00000149823|ENST00000279281|VPS51'] 54141 16012 KVPEWVDTV True PC9_epitope_Rep4 1071.5600608155898 1071.5589699358602 69.523 2 0.12544702940240993 0.0010320311902759728 0.005317771185398491 ['ENSG00000105372|ENST00000598742|RPS19'] 114998 18643 TRAEEIFSL True PC9_epitope_Rep2 1064.55022440788 1064.54912993586 77.076 2 0.12544601056784427 0.0010320311902759728 0.005317895285463544 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 45064 13075 IPHSLPGAVAA True PC9_epitope_Rep3 1031.5763795860698 1031.5752899358602 55.318 2 0.125444935648279 0.0010320311902759728 0.005318026220091879 ['ENSG00000160113|ENST00000291442|NR2F6'] 105408 14154 SRSPEYLSL True PC9_epitope_Rep2 1050.53457434374 1050.53346993586 59.713 2 0.12542876083044344 0.0010320311902759728 0.0053199968365142195 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 64872 18299 LQDVPLSSV True PC9_epitope_Rep2 956.51786165044 956.51676993586 75.711 2 0.1254280836121294 0.0010320311902759728 0.005320079359245941 ['ENST00000524576.5_1_11:66203480-66233392:-|nuORF', 'nc|ENSG00000174547|Q9Y3B7-2|MRPL11', 'nc|ENSG00000174547|Q9Y3B7-3|MRPL11', 'ENSG00000174547|ENST00000310999|MRPL11'] 96502 7722 SADETWDSA True NCI_RA007_Epitope_Rep4 980.37231961556 980.37122993586 36.376 2 0.12542690785468016 0.0010320311902759728 0.005320222634662351 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 96254 12478 RYQDIIHSI True PC9_epitope_Rep6 1143.6036569630699 1143.6020249037902 59.419 3 0.12542655524965413 0.0010320311902759728 0.005320265603132775 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 9282 8131 AVQEFGLAR True NCI_RA007_Epitope_Rep4 989.5294293936498 989.52832993586 38.067 2 0.1254166560027125 0.0010320311902759728 0.0053214720648972974 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 74266 5658 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 26.793 2 0.12541470300698804 0.0010320311902759728 0.005321710116171626 ['ENSG00000167658|ENST00000309311|EEF2'] 104859 5126 SRAPSVATV True PC9_epitope_Rep4 886.4872302285 886.48612993586 26.375 2 0.12541253916867331 0.0010320311902759728 0.005321973879312774 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 87999 13894 QRNPQGFVL True PC9_epitope_Rep3 1057.5668775315298 1057.56578993586 58.522 2 0.12540976317893465 0.0010320311902759728 0.0053223122800122365 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 46615 8492 ITDHGSLIY True H1975_Epitope_Rep1 1017.51311062317 1017.51200993586 37.594 2 0.12540732677203228 0.0010320311902759728 0.005322609302028713 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 22470 16194 ETEYSFLDY True H1975_Epitope_Rep3 1165.4815357113698 1165.48097496793 67.747 1 0.12540293001723177 0.0010320311902759728 0.00532314535091581 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 45411 9637 IQFNPPLSEK True NCI_RA007_Epitope_Rep3 1171.62372370131 1171.62262993586 44.985 2 0.125402190955061 0.0010320311902759728 0.005323235461992124 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 62616 18387 LLLDQLTKA True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 78.791 2 0.1253961971388769 0.0010320311902759728 0.005323966320767503 ['ENST00000510524.5_1_3:129170769-129177513:+|nuORF'] 134690 18099 VYTHNLYYL True PC9_epitope_Rep1 1184.5866099165999 1184.58550993586 74.41 2 0.1253958952209476 0.0010320311902759728 0.005324003137874448 ['ENSG00000198954|ENST00000361983|KIFBP'] 40405 7692 HQVPAVSSV True PC9_epitope_Rep3 922.4872302285 922.48612993586 34.584 2 0.12539510320528935 0.0010320311902759728 0.005324099720689303 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 49440 9060 KEYDGVVVV True H1975_Epitope_Rep2 1006.5335117145797 1006.53240993586 39.802 2 0.12538539969768064 0.0010320311902759728 0.0053252831601248215 ['ENSG00000198695|ENST00000361681|MT-ND6'] 7800 11273 ASVAWAVLK True NCI_RA007_Epitope_Rep5 943.5491022090699 943.54800993586 50.006 2 0.12538476909449334 0.0010320311902759728 0.005325360077393506 ['ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3'] 134253 12426 VYNENLVHMI True NCI_RA007_Epitope_Rep4 1230.60669373818 1230.60558993586 54.803 2 0.12538332081267786 0.0010320311902759728 0.005325536734417773 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 6183 9643 APNLQNQQV True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 42.058 2 0.12538309758638114 0.0010320311902759728 0.00532556396339573 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 104890 17137 SRDAFGYATL True PC9_epitope_Rep3 1099.52982331647 1099.5287299358602 71.075 2 0.12538220625513685 0.0010320311902759728 0.0053256726886802535 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 107080 14208 SVHGDFLNV True PC9_epitope_Rep4 986.48214484806 986.48104993586 62.56 2 0.12537828908875745 0.0010320311902759728 0.005326150533514427 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 73117 21812 MRLGSIFGL True PC9_epitope_Rep5 992.5477223100798 992.54662993586 88.932 2 0.12537776684413965 0.0010320311902759728 0.0053262142439396655 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000451892.1_1_1:240307039-240307453:-|nuORF'] 138089 15948 YGGLIFNSY True H1975_Epitope_Rep2 1032.4916469026 1032.49107496793 66.542 1 0.12537773141740144 0.0010320311902759728 0.005326218565796924 ['ENSG00000198712|ENST00000361739|MT-CO2'] 75145 8464 NHYQKQLEI True PC9_epitope_Rep1 1171.5985715826298 1171.59691490379 37.392 3 0.1253737541107888 0.0010320311902759728 0.005326703796078925 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 90068 2732 REAEFTKSIA True H1975_Epitope_Rep2 1150.59823722946 1150.5971499358602 14.576 2 0.12536627259685523 0.0010320311902759728 0.005327616656138007 ['ENSG00000118363|ENST00000263672|SPCS2'] 43665 21295 IHDGFGFML True PC9_epitope_Rep5 1035.48478770035 1035.4836899358602 86.963 2 0.1253649239165191 0.0010320311902759728 0.005327781232255169 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 23083 17120 EVIKELAQI True PC9_epitope_Rep2 1041.6070110080097 1041.60647496793 71.1 1 0.12535844265239904 0.0010320311902759728 0.005328572194398155 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 72291 11165 MIDPSGVSY True H1975_Epitope_Rep1 967.4320834211501 967.43153496793 47.914 1 0.12535781039074312 0.0010320311902759728 0.005328649360670026 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 40475 8242 HRDGALTQL True PC9_epitope_Rep5 1009.53049202281 1009.52938993586 36.644 2 0.1253552646767814 0.0010320311902759728 0.00532896007106246 ['ENSG00000127948|ENST00000461988|POR'] 132258 13442 VTVSDLQHV True PC9_epitope_Rep1 996.5240096600402 996.52290993586 56.564 2 0.12535177278400664 0.0010320311902759728 0.005329386293710756 ['ENSG00000068489|ENST00000262293|PRR11'] 35128 16996 GQWASVIRV True PC9_epitope_Rep4 1014.5610638750999 1014.55996993586 73.365 2 0.12534629590949037 0.0010320311902759728 0.005330054871831161 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 141935 18676 YVFPGVTRL True PC9_epitope_Rep4 1050.58621599378 1050.5851099358601 79.917 2 0.12534362439192687 0.0010320311902759728 0.005330381021653684 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 39173 6972 HIDVGGHMY True H1975_Epitope_Rep2 1027.45455020123 1027.4534499358601 31.739 2 0.1253402373866499 0.0010320311902759728 0.005330794549287477 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15'] 35922 8132 GTSELLLAK True NCI_RA007_Epitope_Rep4 930.5385970950199 930.53750993586 38.071 2 0.12533961142377953 0.0010320311902759728 0.005330870978046763 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 1122 7745 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43270993586 34.745 2 0.12533934357266782 0.0010320311902759728 0.005330903682436431 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 54468 6413 KYGPIRQI True PC9_epitope_Rep4 973.5709002828098 973.56980993586 31.762 2 0.1253347560679131 0.0010320311902759728 0.005331463843354092 ['ENST00000478050.1_1_2:24296944-24299099:-|nuORF', 'ENSG00000115128|ENST00000233468|SF3B6'] 2916 13409 AEYIPLTPAAA True H1975_Epitope_Rep2 1115.58627556343 1115.5851699358602 56.713 2 0.12533448770718808 0.0010320311902759728 0.00533149661354096 ['ENSG00000101216|ENST00000370077|GMEB2'] 46671 8870 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.5496749679298 39.087 1 0.12533088189414793 0.0010320311902759728 0.005331936947380837 ['ENSG00000170348|ENST00000303575|TMED10'] 69892 8207 LVIITAGAR True H1975_Epitope_Rep1 912.5756513100799 912.57454993586 36.51 2 0.1253303339983138 0.0010320311902759728 0.005332003858318347 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 73045 16645 MRDPIRILV True PC9_epitope_Rep2 1111.65358436095 1111.65248993586 69.269 2 0.1253214510957441 0.0010320311902759728 0.005333088784059819 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 87242 20086 QPLPVILHV True PC9_epitope_Rep1 1014.6226015025001 1014.62150993586 82.09 2 0.1253183798329356 0.0010320311902759728 0.005333463947405005 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 55685 23376 LALFPGVAL True PC9_epitope_Rep5 899.5480395799099 899.5474949679301 94.901 1 0.12531681395538835 0.0010320311902759728 0.005333655233689952 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 21371 9556 ERHPQTIVL True PC9_epitope_Rep1 1091.60874234351 1091.60764993586 41.615 2 0.12531098440718158 0.0010320311902759728 0.005334367425546875 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 106320 5354 STFSTNYR True NCI_RA007_Epitope_Rep5 974.4457593393399 974.44466993586 27.285 2 0.12530509133140852 0.0010320311902759728 0.005335087473309856 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 105622 12901 SSDPFLNSGTY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 54.736 2 0.12530071338861815 0.0010320311902759728 0.005335622455662571 ['nc|ENSG00000137693|P46937-4|YAP1', 'nc|ENSG00000137693|P46937-5|YAP1', 'nc|ENSG00000137693|P46937-3|YAP1', 'nc|ENSG00000137693|P46937-6|YAP1', 'nc|ENSG00000137693|P46937-7|YAP1', 'nc|ENSG00000137693|P46937-2|YAP1', 'nc|ENSG00000137693|P46937-8|YAP1', 'ENSG00000137693|ENST00000282441|YAP1', 'nc|ENSG00000137693|P46937-9|YAP1'] 105186 12772 SRGDFVVEY True PC9_epitope_Rep6 1070.50327421546 1070.5021699358601 60.621 2 0.12529848336441032 0.0010320311902759728 0.005335894983694637 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 3095 12252 AGAEGFVRV True PC9_epitope_Rep1 904.4766655447999 904.47556993586 51.987 2 0.12529637722182915 0.0010320311902759728 0.005336152384866407 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 38912 20955 HHFLELVTL True PC9_epitope_Rep3 1107.60767971435 1107.60658993586 85.881 2 0.12529364965013284 0.0010320311902759728 0.005336485751785277 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 34978 22096 GQSELTLLL True PC9_epitope_Rep2 972.54916177872 972.54806993586 90.464 2 0.1252757754073024 0.0010320311902759728 0.00533867086760119 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 21408 16602 ERINNINIL True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 69.101 2 0.1252755580419552 0.0010320311902759728 0.005338697445787876 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 14413 14701 DTDLFSQPTY True H1975_Epitope_Rep3 1185.51898384925 1185.51788993586 61.92 2 0.1252753465575237 0.0010320311902759728 0.005338723305014485 ['ENSG00000153933|ENST00000284061|DGKE', 'nc|ENSG00000153933|P52429-2|DGKE', 'ENST00000576869.5_1_17:54912147-54924989:+|nuORF'] 107860 16748 SVVGSNQLIEA True PC9_epitope_Rep5 1115.58225281215 1115.5811499358601 69.427 2 0.12526397311225118 0.0010320311902759728 0.00534011417223963 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 11743 11901 DHASIQMNV True PC9_epitope_Rep5 1013.46002950449 1013.4589299358599 50.774 2 0.12526263898215045 0.0010320311902759728 0.005340277347302192 ['ENSG00000171858|ENST00000343986|RPS21'] 1895 9982 AEIETELQA True H1975_Epitope_Rep3 1002.4869554449798 1002.48584993586 43.431 2 0.12526257689345982 0.0010320311902759728 0.005340284941377782 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 70986 16898 LYHDIFSRL True PC9_epitope_Rep4 1162.61349337078 1162.6123899358602 72.983 2 0.1252618407362671 0.0010320311902759728 0.005340374981664061 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 27602 15069 FNPFVTSDR True PC9_epitope_Rep5 1081.51925863277 1081.5181699358602 62.969 2 0.12525343537716482 0.0010320311902759728 0.005341403156956611 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 29941 18675 FVYPLDFART True PC9_epitope_Rep6 1227.6288090817498 1227.6277099358601 84.478 2 0.12525049521388817 0.0010320311902759728 0.005341762854664655 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 106292 8358 STFNQVVLK True NCI_RA007_Epitope_Rep5 1034.5760452328998 1034.57494993586 38.82 2 0.12524941361174263 0.0010320311902759728 0.00534189518316036 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 78076 19546 NVVEQFLQA True PC9_epitope_Rep6 1046.53965972418 1046.53856993586 87.847 2 0.12524935689532005 0.0010320311902759728 0.005341902122213549 ['ENSG00000121060|ENST00000316881|TRIM25'] 59580 9179 LFVGGIKED True NCI_RA007_Epitope_Rep4 976.5229470308799 976.52184993586 42.147 2 0.12524634187752084 0.0010320311902759728 0.0053422710116745875 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 25531 10740 FEIGGTIHP True H1975_Epitope_Rep2 969.49198125577 969.49088993586 46.338 2 0.12524120554755366 0.0010320311902759728 0.005342899502636494 ['ENSG00000138678|ENST00000264409|GPAT3'] 46633 16881 ITDIQIPLDY True H1975_Epitope_Rep2 1189.6230549949698 1189.62247496793 70.178 1 0.12523485987125293 0.0010320311902759728 0.005343676071603651 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 40507 10819 HRDSGILGL True PC9_epitope_Rep6 966.5246783663799 966.52358993586 52.462 2 0.12523358456663566 0.0010320311902759728 0.005343832153745071 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 89029 20849 QVLEDFPTI True PC9_epitope_Rep4 1060.54407639828 1060.54357496793 88.35 1 0.12523115590703804 0.0010320311902759728 0.005344129405203738 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 116547 20583 TTVDHFWGL True PC9_epitope_Rep3 1074.51344497634 1074.5123499358601 84.438 2 0.12522967631470502 0.0010320311902759728 0.005344310505215405 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'SUN1|p.D153Y|1|0.2|ENSG00000164828|chr7:843211-843211|G/T|missense_variant', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.E401Kfs*45|1|0.12|ENSG00000164828|chr7:853555-853555|G/-|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 116589 5915 TVADHIQKV True PC9_epitope_Rep1 1009.5556441414899 1009.55454993586 27.566 2 0.12522487800122933 0.0010320311902759728 0.005344897853411694 ['ENSG00000181789|ENST00000314797|COPG1'] 89536 20277 QYLQDAYSF True PC9_epitope_Rep2 1133.5029398622898 1133.50184993586 83.417 2 0.12522333601669827 0.0010320311902759728 0.005345086616884661 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 43571 4494 IGSGC[Carbamidomethyl]NLDSAR True H1975_Epitope_Rep3 1148.5244209456298 1148.5233299358601 22.406 2 0.1252206520498173 0.0010320311902759728 0.005345415192782721 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 85350 9285 QETLTNISA True H1975_Epitope_Rep2 975.48728979815 975.48618993586 40.672 2 0.1252169587966968 0.0010320311902759728 0.005345867359637995 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 87733 9786 QRALPSEEL True PC9_epitope_Rep2 1041.54547338061 1041.54436993586 42.979 2 0.12521458278254582 0.0010320311902759728 0.005346158276083058 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 21682 4474 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 23.677 2 0.1252024013230389 0.0010320311902759728 0.005347650003831304 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 90946 5190 REYQLNDSA True NCI_RA007_Epitope_Rep4 1094.49925146418 1094.49814993586 26.493 2 0.12519861779945377 0.0010320311902759728 0.005348113412914587 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'nc|ENSG00000087258|P09471-2|GNAO1', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1', 'ENSG00000065135|ENST00000369851|GNAI3', 'ENSG00000087258|ENST00000262493|GNAO1'] 111226 6365 THITAQTAV True PC9_epitope_Rep1 940.4977949122 940.49668993586 29.292 2 0.12519614475244975 0.0010320311902759728 0.0053484163350280235 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 21153 12785 ERATNIEVL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 54.052 2 0.1251947927960986 0.0010320311902759728 0.00534858194250111 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 76060 17752 NMDTFSNLLY True H1975_Epitope_Rep2 1216.54342477528 1216.5423299358602 73.603 2 0.12518611068670876 0.0010320311902759728 0.005349645574626346 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 38042 9768 HASDRIIAL True PC9_epitope_Rep2 994.5559784946599 994.55488993586 42.911 2 0.12518276905458642 0.0010320311902759728 0.00535005500821052 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 124482 5931 VGVNGFGR True NCI_RA007_Epitope_Rep3 804.4242360491198 804.42312993586 30.309 2 0.12517845825323226 0.0010320311902759728 0.005350583234672655 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 64805 5009 LQDAEIAR True NCI_RA007_Epitope_Rep1 914.4821448480599 914.48104993586 23.568 2 0.1251697433181529 0.0010320311902759728 0.005351651280332693 ['ENSG00000197956|ENST00000368719|S100A6'] 137125 9360 YASSANLHLPK True PC9_epitope_Rep5 1199.62987171091 1199.62822490379 40.958 3 0.12516903548457078 0.0010320311902759728 0.005351738036983006 ['CON__P34955'] 8017 15243 ATDLDVANFY True H1975_Epitope_Rep3 1127.51350454599 1127.51297496793 64.04 1 0.1251670418710699 0.0010320311902759728 0.005351982394527143 ['ENSG00000142252|ENST00000270257|GEMIN7'] 9222 15145 AVNPKFLAV True PC9_epitope_Rep2 957.5647522732099 957.56364993586 63.514 2 0.12516662489530908 0.0010320311902759728 0.005352033504700066 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 133638 11546 VYAILTHGI True NCI_RA007_Epitope_Rep3 985.5596668927699 985.55856993586 52.547 2 0.1251653125889623 0.0010320311902759728 0.005352194361788129 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 77128 14226 NRNEDPLVL True PC9_epitope_Rep5 1068.55637241748 1068.55526993586 59.726 2 0.1251613944760187 0.0010320311902759728 0.005352674656085064 ['ENSG00000165355|ENST00000298097|FBXO33'] 8390 19737 ATLPTTLGV True PC9_epitope_Rep3 871.5014833103099 871.50038993586 81.146 2 0.12516134108737537 0.0010320311902759728 0.005352681200920491 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 106562 6062 STMSTNGIPR True NCI_RA007_Epitope_Rep1 1062.51279335334 1062.5116899358602 27.619 2 0.12515663574773198 0.0010320311902759728 0.005353258052423119 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 52675 17893 KLVGEFLEV True PC9_epitope_Rep6 1032.5855472874398 1032.5844499358602 81.45 2 0.12515607029173223 0.0010320311902759728 0.005353327378650877 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 42418 6785 IEDLSQQA True H1975_Epitope_Rep2 902.4345259493001 902.43397496793 31.014 1 0.1251526296273554 0.0010320311902759728 0.0053537492311240345 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA'] 88857 13714 QVDFSPDMSY True H1975_Epitope_Rep2 1187.4804901655498 1187.4793899358601 57.895 2 0.12514138209277142 0.0010320311902759728 0.005355128494647702 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 12667 17955 DLDLSPLEY True H1975_Epitope_Rep2 1063.50735653639 1063.50677496793 74.386 1 0.12513578133826714 0.0010320311902759728 0.005355815434332145 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 32012 7439 GEQKFSSLP True H1975_Epitope_Rep3 991.4974605590298 991.49636993586 33.592 2 0.12513267532768937 0.0010320311902759728 0.0053561964277350545 ['ENSG00000166741|ENST00000299964|NNMT', 'NNMT|p.G217V|1|0.08|ENSG00000166741|chr11:114312332-114312332|G/T|missense_variant'] 90531 9005 RELVKNWVP True NCI_RA007_Epitope_Rep1 1139.64512785223 1139.64402993586 39.031 2 0.12512095891912334 0.0010320311902759728 0.005357633839882857 ['ENSG00000127540|ENST00000591899|UQCR11'] 30148 19721 FYPPHPDYTW True PC9_epitope_Rep1 1321.5767735088898 1321.57566993586 80.684 2 0.12512047183374417 0.0010320311902759728 0.005357693605499035 ['ENSG00000130309|ENST00000252599|COLGALT1'] 66162 10365 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.49147496793 44.817 1 0.12511346488744204 0.0010320311902759728 0.005358553433609091 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 140083 21281 YQLEIPENFTT True PC9_epitope_Rep2 1353.6452469915296 1353.64414993586 87.32 2 0.12511181463112736 0.0010320311902759728 0.005358755957594906 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 34866 21195 GQLDFSEFL True PC9_epitope_Rep6 1054.49712620586 1054.4960299358602 94.374 2 0.12510701237368668 0.0010320311902759728 0.005359345346510361 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 73050 15998 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 69.469 2 0.12509735480565817 0.0010320311902759728 0.005360530828086325 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 110183 11658 [Acetylation]-TEQAISFAK True NCI_RA007_Epitope_Rep1 1035.5236756231698 1035.52317496793 49.321 1 0.12509633778886572 0.0010320311902759728 0.005360655683450265 ['ENSG00000169100|ENST00000381401|SLC25A6', 'ENST00000475167.6_1_X:1509126-1510935:-|nuORF', 'ENST00000484026.6_1_X:1509126-1510935:-|nuORF'] 70871 22775 LYEEAFTVF True PC9_epitope_Rep1 1117.53317736141 1117.53208993586 92.413 2 0.12509263649987876 0.0010320311902759728 0.005361110100986258 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 116275 11844 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.49807496793 50.705 1 0.12508694082796581 0.0010320311902759728 0.005361809448236084 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 28888 16760 FTDESYLELY True H1975_Epitope_Rep1 1278.5655996885 1278.5650749679298 69.867 1 0.12506394439527416 0.0010320311902759728 0.005364633991827376 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 13968 6835 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 31.695 2 0.12505808466402332 0.0010320311902759728 0.005365353948233497 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 49462 6468 KEYLKALAA True H1975_Epitope_Rep3 1005.5858816406097 1005.58478993586 29.851 2 0.1250574861806952 0.0010320311902759728 0.005365427486272957 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4', 'nc|ENSG00000124191|Q96NM4-3|TOX2', 'ENSG00000124191|ENST00000341197|TOX2', 'nc|ENSG00000124191|Q96NM4-2|TOX2', 'nc|ENSG00000103460|O15405-2|TOX3', 'ENSG00000103460|ENST00000219746|TOX3'] 139960 21473 YQDEVFGGF True PC9_epitope_Rep1 1060.4501760134397 1060.44906993586 87.437 2 0.12504888124376323 0.0010320311902759728 0.005366484918533531 ['ENSG00000145907|ENST00000356245|G3BP1'] 107078 14898 SVHGDFLNV True PC9_epitope_Rep2 986.48214484806 986.48104993586 62.571 2 0.1250487265570889 0.0010320311902759728 0.005366503929337134 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 124733 18362 VHAPPMQLGF True PC9_epitope_Rep2 1095.5535359665098 1095.5524299358601 75.959 2 0.12504468347894507 0.0010320311902759728 0.005367000842127103 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 49043 4450 KEGKPPISV True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 22.228 2 0.1250422972495254 0.0010320311902759728 0.005367294141802584 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 115286 17697 TRFAEVECL True PC9_epitope_Rep3 1066.5117307241799 1066.5106299358602 73.269 2 0.12503959224859174 0.0010320311902759728 0.00536762664178673 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 107779 18710 SVTDLAFKV True PC9_epitope_Rep2 978.5385970950199 978.53750993586 77.34 2 0.12503508669014568 0.0010320311902759728 0.005368180511978974 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 107181 16361 SVINEINKI True PC9_epitope_Rep1 1028.5866099165999 1028.58550993586 67.752 2 0.1250227062213706 0.0010320311902759728 0.005369702736749465 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 109800 3296 TEEDPGRPGA True H1975_Epitope_Rep1 1027.4570522990298 1027.4559499358602 16.738 2 0.1250220634419317 0.0010320311902759728 0.005369781780432064 ['ENST00000524852.1_1_11:6340395-6340857:-|nuORF', 'ENST00000532354.1_1_11:6340395-6341123:-|nuORF', 'ENSG00000170955|ENST00000303927|CAVIN3'] 27465 13206 FM[Oxidation]DPASALY True H1975_Epitope_Rep3 1029.44773386573 1029.4471749679299 56.052 1 0.1250202224948953 0.0010320311902759728 0.005370008171137581 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 96325 8751 RYSPVLSRF True NCI_RA007_Epitope_Rep4 1123.61382772395 1123.6127299358602 40.457 2 0.12501833425133524 0.0010320311902759728 0.005370240387860846 ['COG1|p.A940Gfs*7|1|0.42|ENSG00000166685|chr17:73208324-73208325|-/G|frameshift_variant', 'ENSG00000166685|ENST00000299886|COG1'] 19860 5769 ELTAVVQK True NCI_RA007_Epitope_Rep2 886.51238234718 886.51128993586 27.056 2 0.12501675333439707 0.0010320311902759728 0.005370434817041821 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF', 'ENST00000407940.1_1_6:7339375-7339741:-|nuORF'] 111053 15988 THDGSILIV True PC9_epitope_Rep3 953.51819600361 953.51708993586 66.642 2 0.12501334555666985 0.0010320311902759728 0.005370853946297893 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 45628 19285 IRDLNIVVV True PC9_epitope_Rep5 1039.6389798426299 1039.6378899358601 79.223 2 0.12501325600582386 0.0010320311902759728 0.005370864960764237 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'ENST00000474535.2_1_2:38545640-38570535:-|nuORF'] 65895 10272 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 44.519 1 0.1250105078569057 0.0010320311902759728 0.005371202985019982 ['ENSG00000182108|ENST00000331808|DEXI'] 104122 3720 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 20.447 2 0.12500702903380448 0.0010320311902759728 0.005371630912628768 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 109748 4654 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 23.025 2 0.12500548777548764 0.0010320311902759728 0.005371820512426437 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 36068 15296 GVAANDVIVHI True PC9_epitope_Rep6 1106.6084079903399 1106.60730993586 70.954 2 0.12500459918178153 0.0010320311902759728 0.005371929826861763 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 24795 7548 FATHAAALSVR True PC9_epitope_Rep2 1142.6196413803798 1142.61799490379 34.398 3 0.12499887219892075 0.0010320311902759728 0.0053726344102828895 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 130904 5863 VTDDSPKYNY True H1975_Epitope_Rep3 1200.5298828861198 1200.52937496793 27.567 1 0.12499723994548513 0.0010320311902759728 0.0053728352409387874 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 24064 10216 EYNSDLHQF True PC9_epitope_Rep6 1151.4883524273098 1151.48724993586 49.944 2 0.12498753303453976 0.0010320311902759728 0.005374029720556396 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 28905 10117 FTDGQQLY True H1975_Epitope_Rep2 970.43961132974 970.43850993586 43.911 2 0.12498460642774242 0.0010320311902759728 0.00537438990393406 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 107253 17442 SVKNGFLTI True PC9_epitope_Rep5 977.55458151233 977.55348993586 72.09 2 0.12497949907055077 0.0010320311902759728 0.005375018533335283 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 54144 17574 KVPEWVDTV True PC9_epitope_Rep5 1071.5600608155898 1071.5589699358602 72.607 2 0.12497946782100472 0.0010320311902759728 0.005375022379848438 ['ENSG00000105372|ENST00000598742|RPS19'] 77954 18575 NVLNDLAKV True PC9_epitope_Rep2 984.5603951687599 984.55928993586 76.801 2 0.12497770002301295 0.0010320311902759728 0.005375239982867185 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant'] 72051 19600 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55652993586 81.6 2 0.12497645432858373 0.0010320311902759728 0.005375393323938594 ['ENSG00000198712|ENST00000361739|MT-CO2'] 133667 18845 VYAPPVGGF True PC9_epitope_Rep4 905.4647038787698 905.46360993586 80.575 2 0.12497517884048276 0.0010320311902759728 0.005375550336961098 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 34813 19487 GQIDLLERL True PC9_epitope_Rep4 1055.59750895347 1055.59640993586 83.073 2 0.124966826209099 0.0010320311902759728 0.0053765786598852896 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.N627Kfs*7|1|0.66|ENSG00000134982|chr5:112835084-112835085|-/A|frameshift_variant', 'APC|p.R805Dfs*15|1|0.71|ENSG00000134982|chr5:112838007-112838007|C/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 103803 10875 SPVYVGRVV True PC9_epitope_Rep4 974.5549158654999 974.55380993586 49.594 2 0.1249644364474644 0.0010320311902759728 0.005376872907639496 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 107191 22492 SVINFLDQL True PC9_epitope_Rep4 1047.5600608155898 1047.5589699358602 94.746 2 0.12495564716163743 0.0010320311902759728 0.00537795525499395 ['ENSG00000196976|ENST00000357360|LAGE3'] 40453 17230 HRDDELYIL True PC9_epitope_Rep5 1172.5825871653199 1172.58094490379 71.292 3 0.1249555394702807 0.0010320311902759728 0.005377968517857253 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 8875 19957 AVFPHLTVV True PC9_epitope_Rep1 981.5647522732099 981.56364993586 81.587 2 0.12495025813007914 0.0010320311902759728 0.005378618987242243 ['ENSG00000134825|ENST00000537328|TMEM258'] 111333 5144 THNPTNATL True PC9_epitope_Rep3 967.47230844035 967.47120993586 24.872 2 0.12494979482920081 0.0010320311902759728 0.005378676052771009 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 134765 11731 VYTTNIQEL True NCI_RA007_Epitope_Rep4 1079.54989005471 1079.5487899358602 52.093 2 0.12494936981306888 0.0010320311902759728 0.005378728403226804 ['ENSG00000110031|ENST00000395074|LPXN', 'nc|ENSG00000110031|O60711-2|LPXN', 'ENST00000529915.1_1_11:58322280-58343350:-|nuORF'] 1147 5574 AEAPPPPPP True H1975_Epitope_Rep3 871.44396843419 871.44286993586 26.481 2 0.12493810544256256 0.0010320311902759728 0.00538011605011687 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 36028 17212 GTYTGFIKV True PC9_epitope_Rep5 984.5280324113198 984.52692993586 71.226 2 0.12493710597407197 0.0010320311902759728 0.005380239190622308 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 140656 17368 YRTDMIQAL True PC9_epitope_Rep1 1109.55392988933 1109.55282993586 71.615 2 0.12493668013208459 0.0010320311902759728 0.005380291657745613 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 6712 8817 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 38.864 2 0.12493112718716315 0.0010320311902759728 0.0053809758706888965 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 16342 7196 EEIDISKAA True H1975_Epitope_Rep2 974.49204082542 974.49094993586 32.613 2 0.1249187621973948 0.0010320311902759728 0.005382499744587543 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 41234 12357 HVLEEVQQV True PC9_epitope_Rep5 1079.56112344475 1079.56002993586 52.527 2 0.12490995664176172 0.0010320311902759728 0.00538358520811889 ['ENSG00000136026|ENST00000378026|CKAP4'] 126660 6927 VLNTNIDGR True PC9_epitope_Rep2 1000.53015766964 1000.52906993586 32.045 2 0.1249077700036975 0.0010320311902759728 0.005383854788920033 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 33970 11024 GLSQSALPYR True PC9_epitope_Rep2 1090.5771078620598 1090.5760099358602 47.723 2 0.12490638321399665 0.0010320311902759728 0.0053840257668611325 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 2135 12586 AELNSYVPVTA True H1975_Epitope_Rep2 1162.5870038394198 1162.5859099358602 53.508 2 0.12489880436157677 0.0010320311902759728 0.005384960261106804 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 86260 5571 QIQDSIVTK True NCI_RA007_Epitope_Rep3 1030.56587447202 1030.56476993586 28.906 2 0.12489849907840027 0.0010320311902759728 0.005384997906729535 ['ENSG00000196466|ENST00000430385|ZNF799', 'nc|ENSG00000196466|Q96GE5-2|ZNF799', 'ENSG00000180855|ENST00000301547|ZNF443'] 108192 19806 SYGKINILL True PC9_epitope_Rep3 1019.60153170475 1019.60042993586 81.416 2 0.12489174269159267 0.0010320311902759728 0.005385831128373798 ['ENSG00000112249|ENST00000369162|ASCC3'] 8206 7039 ATFPDPNVK True NCI_RA007_Epitope_Rep5 987.5025459394699 987.50144993586 33.754 2 0.12488960971374641 0.0010320311902759728 0.005386094201033068 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 7194 10287 AQYENPPHI True PC9_epitope_Rep1 1067.50360856863 1067.5025099358602 44.454 2 0.12488564487921687 0.0010320311902759728 0.005386583240784361 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000594774.5_1_19:8618146-8642307:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 74229 7060 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.4288949679301 32.084 1 0.12488321342582287 0.0010320311902759728 0.005386883168240416 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 8909 9291 AVFPSIVGRPR True NCI_RA007_Epitope_Rep4 1197.69822605425 1197.6965849037902 42.594 3 0.12487694350006676 0.0010320311902759728 0.005387656658927062 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 141668 22240 YTTDFIYQL True PC9_epitope_Rep3 1162.55464108198 1162.55354993586 90.832 2 0.12487580473143355 0.0010320311902759728 0.005387797155037378 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 104702 16314 SQVDRLVAL True PC9_epitope_Rep3 999.5712942056298 999.57018993586 67.887 2 0.12487435009734572 0.0010320311902759728 0.005387976626419329 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 27351 17563 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55805496793 72.865 1 0.12487321121034536 0.0010320311902759728 0.005388117145313824 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 73036 13271 M[Oxidation]RDPIRILV True PC9_epitope_Rep4 1127.64849936095 1127.64685490379 58.942 3 0.1248662515608513 0.0010320311902759728 0.005388975923360196 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 112104 16838 TIVNELVRV True PC9_epitope_Rep6 1041.61824439805 1041.6171499358602 77.282 2 0.12486260649232316 0.0010320311902759728 0.005389425755990966 ['ENSG00000171298|ENST00000302262|GAA'] 105103 5025 SREESAGPAL True PC9_epitope_Rep4 1015.4934378077497 1015.49234993586 25.956 2 0.12485829866627478 0.0010320311902759728 0.00538995742602418 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 105455 16588 SRVDLSNVL True PC9_epitope_Rep2 1001.5505587610501 1001.54946993586 69.044 2 0.12485049471118898 0.0010320311902759728 0.005390920717738127 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000196873|Q5JTY5-2|ZNG1C', 'ENST00000382436.3_9:42674366-42714533:+|nuORF', 'ENST00000456188.5_1_2:114214762-114253317:+|nuORF'] 21369 14464 ERGPVLQL True PC9_epitope_Rep5 910.5236157372199 910.52250993586 60.637 2 0.12484607507802663 0.0010320311902759728 0.005391466335964491 ['nc|ENSG00000076706|P43121-2|MCAM', 'ENST00000528533.5_1_11:119181936-119187838:-|nuORF', 'ENSG00000076706|ENST00000264036|MCAM'] 87259 7075 QPLYQPSHA True PC9_epitope_Rep5 1039.5086939490698 1039.50758993586 32.181 2 0.12484391572183531 0.0010320311902759728 0.005391732935261881 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 65778 7547 LSDGVAVLK True H1975_Epitope_Rep3 900.5280324113199 900.52692993586 34.011 2 0.1248281535116155 0.0010320311902759728 0.0053936793670459355 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 106399 11020 STIFYYVQK True NCI_RA007_Epitope_Rep4 1147.5913609438696 1147.59026993586 49.257 2 0.12482353815952314 0.0010320311902759728 0.005394249434483005 ['ENSG00000092148|ENST00000399332|HECTD1'] 54653 10618 KYLPESNTL True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 48.592 2 0.12482255413848962 0.0010320311902759728 0.0053943709839533414 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 41107 13059 HTVEDLVKV True PC9_epitope_Rep1 1038.5709598524597 1038.5698699358602 55.098 2 0.12481981991921885 0.0010320311902759728 0.005394708737682379 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 118692 13520 TYTDVTPRQF True PC9_epitope_Rep3 1226.59315184902 1226.5920499358601 57.055 2 0.12481716243754784 0.0010320311902759728 0.005395037032003928 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 99143 12031 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 54.08 2 0.12481593130039989 0.0010320311902759728 0.005395189128245612 ['ENSG00000132646|ENST00000379143|PCNA'] 76545 19234 NQITQLESL True PC9_epitope_Rep4 1044.54513902744 1044.5440499358601 82.084 2 0.1248137017722575 0.0010320311902759728 0.0053954645776728 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 99317 17812 SHSFVVNIL True PC9_epitope_Rep6 1014.5498304850599 1014.54872993586 81.146 2 0.12481084350573049 0.0010320311902759728 0.005395817725417528 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 5991 7020 APIIAVTR True H1975_Epitope_Rep3 839.5228874612301 839.5217899358599 31.965 2 0.12481067235921935 0.0010320311902759728 0.005395838871821764 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 130664 6495 VSTGDVNVE True H1975_Epitope_Rep2 918.42944056886 918.4288949679301 29.9 1 0.12480499424643043 0.0010320311902759728 0.005396540490278508 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'KRT10|p.R295Q|1|0.08|ENSG00000186395|chr17:40820407-40820407|C/T|missense_variant'] 103963 17865 SQANRLFYL True PC9_epitope_Rep4 1110.5821932425 1110.58108993586 76.758 2 0.12480227309392344 0.0010320311902759728 0.005396876762359438 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 57433 6567 LEATSAVSA True H1975_Epitope_Rep2 847.4287122928699 847.42816496793 30.17 1 0.12480184951334894 0.0010320311902759728 0.005396929109057428 ['ENSG00000205208|ENST00000379205|C4orf46', 'ENST00000508836.1_1_4:159590767-159593157:-|nuORF'] 93072 14138 RPNDIMAEV True PC9_epitope_Rep3 1043.50697969691 1043.50588993586 59.467 2 0.12480031613131835 0.0010320311902759728 0.005397118610781122 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 8758 9237 AVDDGVNTFK True PC9_epitope_Rep1 1064.5138388991602 1064.51274993586 40.382 2 0.12479980650639635 0.0010320311902759728 0.005397181593790958 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000413611.2_1_1:146675128-146675437:-|nuORF'] 58500 7312 LEQEIATYR True NCI_RA007_Epitope_Rep2 1121.57168812845 1121.5705899358602 33.064 2 0.1247933459680513 0.0010320311902759728 0.005397980094736755 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P13646-1', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 32011 7441 GEQKFSSLP True H1975_Epitope_Rep2 991.4974605590298 991.49636993586 33.567 2 0.12479252050235985 0.0010320311902759728 0.005398082127880057 ['ENSG00000166741|ENST00000299964|NNMT', 'NNMT|p.G217V|1|0.08|ENSG00000166741|chr11:114312332-114312332|G/T|missense_variant'] 28406 11850 FRYTAGTPY True PC9_epitope_Rep2 1074.5134449763398 1074.5123499358601 50.909 2 0.12479075689894695 0.0010320311902759728 0.0053983001275260305 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 39145 7323 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.54013490379 33.551 3 0.12478140755757113 0.0010320311902759728 0.005399455947088807 ['ENSG00000156482|ENST00000287038|RPL30'] 28771 8255 FSSVGSVITK True NCI_RA007_Epitope_Rep1 1023.56006081559 1023.5589699358601 36.11 2 0.12478017967107143 0.0010320311902759728 0.005399607763527728 ['ENST00000522364.5_1_8:80963727-80992703:-|nuORF', 'nc|ENSG00000076554|P55327|TPD52', 'nc|ENSG00000076554|P55327-7|TPD52', 'nc|ENSG00000076554|P55327-5|TPD52', 'nc|ENSG00000076554|P55327-6|TPD52', 'ENST00000517445.5_1_8:80962678-80964851:-|nuORF', 'ENST00000521354.5_1_8:80950353-81083761:-|nuORF', 'TPD52|p.K192Nfs*11|1|0.24|ENSG00000076554|chr8:80038215-80038215|C/-|frameshift_variant', 'nc|ENSG00000076554|P55327-2|TPD52', 'ENSG00000076554|ENST00000518937|TPD52', 'nc|ENSG00000076554|P55327-3|TPD52'] 8092 10343 ATDWGDTQAY True H1975_Epitope_Rep1 1126.4567179458597 1126.4561749679299 44.733 1 0.1247764978443445 0.0010320311902759728 0.005400063011323438 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 77002 18017 NRGQFFTVY True PC9_epitope_Rep5 1130.55089311422 1130.5497899358602 74.318 2 0.12477249303546964 0.0010320311902759728 0.005400558237696248 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 121788 10808 VFPDKGYSF True NCI_RA007_Epitope_Rep3 1058.5072969667401 1058.5061899358602 49.561 2 0.1247611518915784 0.0010320311902759728 0.0054019609016169624 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 6155 11269 APM[Oxidation]PPIIHA True PC9_epitope_Rep5 961.50552352537 961.50442993586 48.338 2 0.12476107919908742 0.0010320311902759728 0.005401969893319796 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 78607 21147 NYSPYVNYF True PC9_epitope_Rep1 1165.50802524273 1165.5069299358602 86.174 2 0.12475930707475108 0.0010320311902759728 0.0054021891009036 ['ENSG00000156162|ENST00000414645|DPY19L4'] 21221 6588 ERDPHEEIL True PC9_epitope_Rep2 1136.5462016566 1136.5445549037902 30.754 3 0.12475448647323023 0.0010320311902759728 0.005402785442015635 ['ENSG00000153140|ENST00000283122|CETN3'] 41471 17489 HYLDTTTLI True PC9_epitope_Rep4 1075.55497543515 1075.5538699358601 75.272 2 0.12475376190664692 0.0010320311902759728 0.005402875081395634 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 2246 11751 AENNWIEEA True H1975_Epitope_Rep2 1074.4618033263 1074.4607099358602 50.276 2 0.12475255741487006 0.0010320311902759728 0.005403024097698606 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1', 'nc|ENSG00000119661|Q4LDG9-2|DNAL1'] 104306 12032 SQIPAQPSV True PC9_epitope_Rep1 925.48689587533 925.4863449679301 51.142 1 0.12475110660890387 0.0010320311902759728 0.005403203592642404 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 4344 14043 AILDYLITK True NCI_RA007_Epitope_Rep3 1048.61684741572 1048.61574993586 62.545 2 0.12474317093811903 0.0010320311902759728 0.00540418550398592 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 27427 22011 FLYPFPLAL True H1975_Epitope_Rep3 1079.60555445603 1079.6044499358602 92.039 2 0.12473961093256829 0.0010320311902759728 0.005404626054118496 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 141304 5437 YTDRALRASY True H1975_Epitope_Rep2 1214.6043852390599 1214.6027249037902 25.94 3 0.12473549676519916 0.0010320311902759728 0.005405135225538116 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF', 'ENSG00000100056|ENST00000252137|ESS2', 'ENST00000434568.5_1_22:19121711-19126708:-|nuORF'] 96850 5088 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 26.223 2 0.12473233875994014 0.0010320311902759728 0.005405526093751802 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 87768 11131 QRDETALQL True PC9_epitope_Rep2 1072.5512870370399 1072.55018993586 48.14 2 0.12472402551443566 0.0010320311902759728 0.005406555161621914 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 96308 12947 RYSEYAEEF True PC9_epitope_Rep2 1192.5036681382796 1192.50256993586 55.094 2 0.12472342788925794 0.0010320311902759728 0.005406629146970802 ['ENSG00000139505|ENST00000381801|MTMR6'] 114517 12285 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.47578496793 52.107 1 0.1247233376882252 0.0010320311902759728 0.005406640313847022 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 9107 20092 AVIPRLVQL True PC9_epitope_Rep1 1007.64915060351 1007.64804993586 82.112 2 0.12471750703363617 0.0010320311902759728 0.005407362196096446 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 106841 6602 SVASISLTK True NCI_RA007_Epitope_Rep3 904.52294703088 904.52184993586 33.029 2 0.12471495627172456 0.0010320311902759728 0.005407678030779033 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 111465 10580 THTTPVLL True PC9_epitope_Rep4 880.5018176634799 880.50072993586 48.437 2 0.12471463139601746 0.0010320311902759728 0.005407718258103467 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 7716 4947 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 24.123 2 0.12471351610419344 0.0010320311902759728 0.00540785635993796 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 75231 14810 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.48937496793 62.123 1 0.12471178160053938 0.0010320311902759728 0.005408071143003588 ['ENSG00000116285|ENST00000377482|ERRFI1'] 87301 11753 QPQPQPYAV True PC9_epitope_Rep3 1026.5134449763398 1026.5123499358601 50.225 2 0.1247095457331984 0.0010320311902759728 0.005408348022119655 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 11706 12184 DHADSNIVI True PC9_epitope_Rep5 982.47197408718 982.47086993586 51.855 2 0.12470744045625667 0.0010320311902759728 0.005408608742246033 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B'] 118949 12742 VADTVARVL True PC9_epitope_Rep1 942.5498304850598 942.54872993586 53.887 2 0.12470198524898508 0.0010320311902759728 0.005409284379248933 ['ENSG00000145632|ENST00000274289|PLK2'] 52834 12256 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54346496793 52.003 1 0.12469581022172095 0.0010320311902759728 0.005410049267041159 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 106828 13469 SVAQDIPKL True PC9_epitope_Rep6 969.5494961318899 969.54838993586 63.503 2 0.12469572106973252 0.0010320311902759728 0.005410060310888938 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 23768 20730 EYGPVYSTW True PC9_epitope_Rep1 1100.48147614172 1100.4803699358602 84.565 2 0.12468285925518939 0.0010320311902759728 0.005411653820685821 ['ENSG00000148158|ENST00000374232|SNX30'] 116248 19597 TTDFIFNLY True H1975_Epitope_Rep3 1132.54407639828 1132.5429699358601 82.106 2 0.12467817619616012 0.0010320311902759728 0.005412234140805923 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 73197 17071 MRYVASYL True PC9_epitope_Rep5 1001.5004377644898 1001.49934993586 70.683 2 0.12467608330082193 0.0010320311902759728 0.005412493510080877 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 84854 10743 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 46.35 1 0.1246758453606645 0.0010320311902759728 0.005412522998406983 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 24483 7449 FAEGQGRAL True PC9_epitope_Rep5 947.4824792012298 947.48138993586 33.606 2 0.12467294005745985 0.0010320311902759728 0.005412883070246508 ['ENSG00000103335|ENST00000301015|PIEZO1'] 90597 11144 REMENIIATV True H1975_Epitope_Rep2 1174.60160835774 1174.6005099358601 47.901 2 0.12466535796465127 0.0010320311902759728 0.005413822875565881 ['ENSG00000112249|ENST00000369162|ASCC3'] 22504 3762 ETGEHLVHVK True NCI_RA007_Epitope_Rep2 1147.5985715826298 1147.59691490379 19.274 3 0.12466484894106646 0.0010320311902759728 0.005413885975097772 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000466325.1_1_X:153581267-153581814:-|nuORF'] 38487 7193 HEQLRAVIV True H1975_Epitope_Rep2 1063.61382772395 1063.6127299358602 32.602 2 0.12465720177103849 0.0010320311902759728 0.005414834019604706 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 93699 14655 RQVEDLQATF True PC9_epitope_Rep1 1205.6040508858898 1205.6029499358601 61.192 2 0.12464898588993609 0.0010320311902759728 0.0054158527503870655 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 65383 8866 LREDSTVSL True PC9_epitope_Rep6 1018.5294889633 1018.52838993586 44.038 2 0.12464793040372611 0.0010320311902759728 0.005415983639350175 ['ENSG00000120875|ENST00000240100|DUSP4'] 118286 15973 TYLPTSPLL True NCI_RA007_Epitope_Rep4 1003.55899818643 1003.55847496793 69.312 1 0.1246477254431888 0.0010320311902759728 0.0054160090565004695 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 95806 10356 RYIPTAAAF True NCI_RA007_Epitope_Rep1 1008.5392658013599 1008.53816993586 44.268 2 0.12463920735608827 0.0010320311902759728 0.0054170654876340854 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 115620 19204 TRVDTILEF True PC9_epitope_Rep4 1092.5815245361598 1092.5804299358601 81.968 2 0.12463582379848433 0.0010320311902759728 0.005417485179630112 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 38340 7128 HEIEGTGLP True H1975_Epitope_Rep1 951.4661604307499 951.46506993586 32.444 2 0.12463227518375866 0.0010320311902759728 0.0054179253793313915 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 92127 13724 RLDAVTLLY True H1975_Epitope_Rep3 1062.60734536118 1062.6062499358602 58.086 2 0.1246228274090825 0.0010320311902759728 0.005419097530844498 ['ENSG00000100036|ENST00000343605|SLC35E4'] 28520 14870 FSEELANLY True H1975_Epitope_Rep2 1084.5076908895599 1084.5065899358601 62.349 2 0.12461611343777879 0.0010320311902759728 0.0054199306602467365 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 62954 14854 LLPGKTYSF True PC9_epitope_Rep2 1024.5593325395998 1024.55822993586 62.4 2 0.1246018766279334 0.0010320311902759728 0.005421697705851181 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 139969 19298 YQDEVFGGF True PC9_epitope_Rep6 1060.4501760134397 1060.44906993586 86.877 2 0.1245961834313431 0.0010320311902759728 0.005422404492551518 ['ENSG00000145907|ENST00000356245|G3BP1'] 73126 15380 MRMLAEDEL True PC9_epitope_Rep4 1106.51001647202 1106.5089099358602 67.091 2 0.12459372486959638 0.0010320311902759728 0.005422709740694094 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 6864 8848 AQHSVELTL True NCI_RA007_Epitope_Rep3 996.52400966004 996.52290993586 41.895 2 0.1245922055846643 0.0010320311902759728 0.005422898379276329 ['ENSG00000090989|ENST00000381295|EXOC1', 'nc|ENSG00000090989|Q9NV70-2|EXOC1'] 119898 19294 VDIVAINDPFI True H1975_Epitope_Rep1 1214.65468947642 1214.65358993586 80.385 2 0.12458886409643881 0.0010320311902759728 0.005423313290242758 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 114790 19245 TQLGPPYHIL True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 78.826 2 0.12458170435179651 0.0010320311902759728 0.005424202417003984 ['ENSG00000119616|ENST00000341162|FCF1'] 21205 9378 ERDPATYNI True PC9_epitope_Rep2 1077.5090878718902 1077.50798993586 41.407 2 0.12458029688858575 0.0010320311902759728 0.005424377218419759 ['ENSG00000138246|ENST00000260818|DNAJC13'] 304 9884 AAHIFNEAL True NCI_RA007_Epitope_Rep3 984.50288029264 984.50178993586 45.954 2 0.12457824969458425 0.0010320311902759728 0.005424631481748241 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 47775 21869 IYEPNFIFF True PC9_epitope_Rep6 1188.5855472874398 1188.5844499358602 97.019 2 0.12457823066748616 0.0010320311902759728 0.005424633844985643 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 142455 13599 YYFPVKNVI True NCI_RA007_Epitope_Rep4 1141.6171817688898 1141.6160899358601 59.518 2 0.12457658724682392 0.0010320311902759728 0.00542483796784303 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 134479 18643 VYPQYVIEY True PC9_epitope_Rep6 1172.57537652656 1172.5748749679299 84.354 1 0.12457394385814076 0.0010320311902759728 0.005425166308611899 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 70420 11424 LVTTVTEIAG True H1975_Epitope_Rep3 1002.5597264624199 1002.55862993586 49.059 2 0.12456361680921228 0.0010320311902759728 0.0054264492393787545 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 129255 23057 VQVEDIVFL True PC9_epitope_Rep1 1060.580461907 1060.57987496793 93.489 1 0.12456061527549797 0.0010320311902759728 0.0054268221761063495 ['ENSG00000197780|ENST00000338366|TAF13'] 84268 19895 PYNPILGETF True PC9_epitope_Rep6 1149.57062549929 1149.5695299358601 89.181 2 0.12455511856421941 0.0010320311902759728 0.005427505200578055 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 109654 16158 TEAPPIIFATP True H1975_Epitope_Rep2 1155.6175756917098 1155.61646993586 67.363 2 0.12455231022537434 0.0010320311902759728 0.0054278541988785345 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 34769 12477 GQFSVLFTK True NCI_RA007_Epitope_Rep1 1025.5545815123298 1025.5534899358602 52.51 2 0.1245509269733412 0.0010320311902759728 0.0054280261066639865 ['CON__P12763'] 552 4376 AAQDSTDLVAK True NCI_RA007_Epitope_Rep5 1117.5615173675699 1117.5604299358602 23.451 2 0.12453979037915995 0.0010320311902759728 0.005429410334653898 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 133917 11729 VYIHPSSALF True NCI_RA007_Epitope_Rep3 1132.59169529704 1132.5905899358602 53.247 2 0.12453649826257168 0.0010320311902759728 0.005429819596012732 ['ENSG00000067596|ENST00000262415|DHX8'] 35076 12465 GQVIKGIGV True PC9_epitope_Rep1 869.5334521449298 869.53234993586 52.812 2 0.1245341040545506 0.0010320311902759728 0.005430117252342477 ['ENSG00000171497|ENST00000307720|PPID'] 105697 11031 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep1 1170.4539414449798 1170.45337496793 47.393 1 0.12453381160984617 0.0010320311902759728 0.005430153611188678 ['ENSG00000115758|ENST00000234111|ODC1'] 62931 15444 LLPDNVHYV True PC9_epitope_Rep5 1068.5603951687601 1068.55928993586 64.414 2 0.12453181149731007 0.0010320311902759728 0.005430402286078125 ['ENSG00000039123|ENST00000230640|MTREX'] 78338 18833 NYIVPDKQIF True PC9_epitope_Rep2 1235.6550238295897 1235.65392993586 77.81 2 0.12452718447900028 0.0010320311902759728 0.005430977608115653 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 110616 18627 TFTFSHATF True PC9_epitope_Rep5 1057.4868958753298 1057.48578993586 76.674 2 0.12452252543512371 0.0010320311902759728 0.0054315569725577545 ['ENSG00000204713|ENST00000377199|TRIM27'] 108362 16581 SYLEKQVVTF True PC9_epitope_Rep4 1212.6390394122798 1212.6379499358602 71.755 2 0.1244987018583273 0.0010320311902759728 0.005434520444250657 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 9038 10658 AVHEDIVAV True PC9_epitope_Rep4 951.5025459394699 951.50144993586 48.745 2 0.12449670131679007 0.0010320311902759728 0.005434769368500238 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 39074 18724 HHSSVIFIF True PC9_epitope_Rep4 1085.56581490237 1085.56470993586 80.103 2 0.12449240183634681 0.0010320311902759728 0.005435304383928819 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 88000 11961 QRNPQGFVL True PC9_epitope_Rep4 1057.5668775315298 1057.56578993586 53.8 2 0.1244877687593405 0.0010320311902759728 0.005435880968965793 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 103798 11280 SPVYVGRVV True PC9_epitope_Rep2 974.5549158654999 974.55380993586 48.714 2 0.12448771917820924 0.0010320311902759728 0.005435887139646778 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 26252 16415 FHEGDVITL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 71.102 2 0.12448383459954684 0.0010320311902759728 0.005436370621025042 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 103696 6829 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 31.283 2 0.12447306936586346 0.0010320311902759728 0.005437710700849359 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 43703 6892 IHDSQAPSL True PC9_epitope_Rep2 966.47705946762 966.47596993586 31.912 2 0.12446991312984844 0.0010320311902759728 0.005438103657373105 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 130148 9648 VSDTVVEPY True H1975_Epitope_Rep1 1007.4811417885498 1007.48057496793 42.039 1 0.12444794112808132 0.0010320311902759728 0.0054408399786375315 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 21107 19609 ERADLIAYL True PC9_epitope_Rep4 1062.57095985246 1062.5703749679299 83.55 1 0.12444656561986875 0.0010320311902759728 0.005441011324803201 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 93438 5286 RQGNMTAAL True NCI_RA007_Epitope_Rep3 960.4810993022398 960.48000993586 27.802 2 0.12444556320067668 0.0010320311902759728 0.005441136198842625 ['ENSG00000162704|ENST00000359856|ARPC5'] 58583 8213 LEQPTDPVA True H1975_Epitope_Rep3 968.4814761417199 968.48092496793 36.575 1 0.12443838274684228 0.0010320311902759728 0.005442030769292053 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 133124 20904 VVQPLLVSV True PC9_epitope_Rep2 952.5957180483199 952.59462993586 85.853 2 0.12443759834220107 0.0010320311902759728 0.0054421285023778096 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 136272 12352 WSDGHLIYY True H1975_Epitope_Rep1 1152.52400966004 1152.52290993586 52.542 2 0.12443250219607958 0.0010320311902759728 0.005442763499822251 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2'] 14338 3993 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 21.737 2 0.12443141528977744 0.0010320311902759728 0.005442898941503032 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 5492 4519 ALYEAGER True NCI_RA007_Epitope_Rep5 907.4399456829099 907.43884993586 24.036 2 0.1244245096071053 0.0010320311902759728 0.005443759550305541 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 8521 8427 ATSVITIVK True NCI_RA007_Epitope_Rep4 930.57498260374 930.57388993586 39.229 2 0.12441932916626196 0.0010320311902759728 0.005444405241352601 ['ENSG00000197063|ENST00000357736|MAFG'] 57591 4842 LEDVSKPPA True H1975_Epitope_Rep3 954.5022115863 954.50110993586 23.75 2 0.12441381145551275 0.0010320311902759728 0.005445093052315916 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 93317 6870 RPSPPVQSV True PC9_epitope_Rep1 965.52942939365 965.52832993586 31.23 2 0.12441373946375736 0.0010320311902759728 0.005445102027020416 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 45128 20731 IPMELVNEV True PC9_epitope_Rep2 1042.53688284286 1042.53578993586 85.179 2 0.12440836498304615 0.0010320311902759728 0.005445772066568077 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A'] 74997 7341 NHQKDIQVL True PC9_epitope_Rep1 1093.58800689893 1093.5869099358601 33.049 2 0.12440790458151295 0.0010320311902759728 0.00544582946884434 ['ENSG00000153561|ENST00000283632|RMND5A'] 64424 20151 LPNLQTVTV True PC9_epitope_Rep3 983.56514619603 983.56404993586 82.766 2 0.12440371946196889 0.0010320311902759728 0.005446351291405798 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 8911 8733 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6965849037902 40.258 3 0.12440231037051946 0.0010320311902759728 0.0054465269953119805 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 7341 20418 ARPPWMWVL True PC9_epitope_Rep6 1154.60590589254 1154.6048099358602 91.242 2 0.12439910991983708 0.0010320311902759728 0.005446926089894154 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 140517 13679 YRMDGHIQL True PC9_epitope_Rep1 1131.5495132152298 1131.54840993586 57.47 2 0.12439374381351954 0.0010320311902759728 0.005447595304942847 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 66153 12450 LSEPEEAAALY True H1975_Epitope_Rep3 1191.5659340416698 1191.56537496793 53.081 1 0.12439348095856675 0.0010320311902759728 0.005447628088042308 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF'] 99116 13806 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 57.948 2 0.1243786318287592 0.0010320311902759728 0.0054494803758597275 ['ENSG00000132646|ENST00000379143|PCNA'] 117288 14802 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59997496793 61.756 1 0.12437165554978442 0.0010320311902759728 0.005450350813424874 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 23714 22873 EYFESPFTI True PC9_epitope_Rep1 1131.5124419168299 1131.51187496793 92.774 1 0.12436894011527058 0.0010320311902759728 0.00545068965783968 ['ENSG00000198938|ENST00000362079|MT-CO3'] 38415 10787 HENIIVAIA True H1975_Epitope_Rep2 978.5498304850599 978.54872993586 46.52 2 0.12436810436022062 0.0010320311902759728 0.005450793951355081 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 22331 10763 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.4967499358602 46.481 2 0.1243636755649949 0.0010320311902759728 0.005451346651454628 ['ENSG00000150787|ENST00000280362|PTS'] 23987 16640 EYM[Oxidation]EHVYLI True PC9_epitope_Rep4 1211.5532615634297 1211.55216993586 71.972 2 0.12436021607699631 0.0010320311902759728 0.005451778423178101 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 134544 10502 VYRQDCETF True PC9_epitope_Rep3 1159.4968089360298 1159.49570993586 45.335 2 0.12436012880254586 0.0010320311902759728 0.005451789316159681 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1'] 54969 9142 KYQEVTNNL True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 40.104 2 0.1243589186780343 0.0010320311902759728 0.0054519403575671865 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 17839 6135 EHTQTVSQL True PC9_epitope_Rep3 1041.50908787189 1041.50798993586 28.646 2 0.12435605969769307 0.0010320311902759728 0.005452297216816142 ['ENSG00000135968|ENST00000309863|GCC2'] 26978 17960 FLEETSLFY True H1975_Epitope_Rep2 1147.5437420451099 1147.54264993586 74.406 2 0.12434836921168287 0.0010320311902759728 0.005453257260432592 ['ENST00000568469.5_1_16:18995385-19051723:+|nuORF', 'ENSG00000170537|ENST00000304381|TMC7', 'nc|ENSG00000170537|Q7Z402-2|TMC7'] 93719 12255 RQYFQEIGL True NCI_RA007_Epitope_Rep3 1152.5927579262 1152.5916699358602 55.353 2 0.12434729478359866 0.0010320311902759728 0.005453391400099937 ['ENSG00000110328|ENST00000227756|GALNT18'] 1589 5424 AEFAERSVA True H1975_Epitope_Rep3 978.4770594676199 978.47596993586 25.922 2 0.12434402696144174 0.0010320311902759728 0.005453799399419218 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 85791 5981 QHDPSAVAV True PC9_epitope_Rep3 922.4508447197799 922.44974993586 28.061 2 0.12433336978728167 0.0010320311902759728 0.0054551301936842985 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 49448 6263 KEYDVAVQA True NCI_RA007_Epitope_Rep5 1021.5080252427298 1021.50692993586 30.769 2 0.12432965026324194 0.0010320311902759728 0.005455594737045148 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 105792 12566 SSIDGLHQI True PC9_epitope_Rep3 968.49270953176 968.49160993586 53.357 2 0.12432279611282429 0.0010320311902759728 0.005456450875539201 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 75813 18925 NLNPEFISV True PC9_epitope_Rep6 1031.5287606873098 1031.52766993586 85.44 2 0.12431413217444941 0.0010320311902759728 0.005457533259474365 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 31434 11482 GEAIPALAA True H1975_Epitope_Rep2 811.44396843419 811.44341496793 49.221 1 0.12431105793864558 0.0010320311902759728 0.0054579173736507 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 74784 10327 NHDTALTL True PC9_epitope_Rep1 883.43994568291 883.43884993586 44.606 2 0.12430694044157076 0.0010320311902759728 0.005458431880889937 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 73033 13900 M[Oxidation]RDPIRILV True PC9_epitope_Rep2 1127.64849936095 1127.6474099358602 58.747 2 0.12430627147238356 0.0010320311902759728 0.00545851547729846 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 6182 9541 APNLQNQQV True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 41.658 2 0.12430398217304683 0.0010320311902759728 0.00545880156454452 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 107314 13232 SVLDYFSER True NCI_RA007_Epitope_Rep3 1114.5294889632999 1114.52838993586 59.322 2 0.12428826957680049 0.0010320311902759728 0.005460765519639358 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6', 'ENST00000556044.5_1_14:71060086-71067354:-|nuORF', 'ENST00000556423.1_1_14:71063310-71067354:-|nuORF', 'ENST00000553611.5_1_14:71060082-71067354:-|nuORF', 'ENST00000554870.5_1_14:71059985-71067354:-|nuORF', 'ENST00000556495.5_1_14:71059591-71067354:-|nuORF', 'nc|ENSG00000133997|O75586-3|MED6'] 132523 10525 VVDPNDPQM True PC9_epitope_Rep2 1013.44879611445 1013.44768993586 45.807 2 0.12428771964245165 0.0010320311902759728 0.005460834269790888 ['ENSG00000151883|ENST00000281631|PARP8'] 133958 21750 VYILQPEVI True PC9_epitope_Rep5 1072.6168474157198 1072.61574993586 88.69 2 0.1242764971160062 0.0010320311902759728 0.005462237441414385 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 137605 5671 YEEVHDLER True NCI_RA007_Epitope_Rep1 1188.54111627616 1188.53947490379 26.117 3 0.12427105787563686 0.0010320311902759728 0.005462917646010739 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF', 'nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4'] 108456 21581 SYLSSILRF True PC9_epitope_Rep2 1084.59169529704 1084.5905899358602 88.483 2 0.12426994943239744 0.0010320311902759728 0.0054630562726394145 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 54255 17524 KWNPTAGVAF True PC9_epitope_Rep2 1089.56072952193 1089.56017496793 72.669 1 0.12426525087846324 0.0010320311902759728 0.005463643932061305 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 96014 15022 RYLPDTLLL True NCI_RA007_Epitope_Rep4 1102.63864548946 1102.63754993586 65.294 2 0.12425550357438596 0.0010320311902759728 0.005464863248316457 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 49100 8444 KEIEYVETV True H1975_Epitope_Rep3 1108.5652057656798 1108.5641099358602 37.464 2 0.12425425419834012 0.0010320311902759728 0.005465019555372773 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 70106 14810 LVPEFVHNV True PC9_epitope_Rep6 1052.5654805492 1052.5643899358602 68.937 2 0.12424692776993845 0.0010320311902759728 0.0054659362390303366 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant'] 36266 9914 GVDVTGPHLY True H1975_Epitope_Rep2 1056.52400966004 1056.52290993586 43.122 2 0.12424596869221241 0.0010320311902759728 0.00546605625010891 ['ENSG00000136930|ENST00000259457|PSMB7'] 87820 8728 QRELGGTAL True PC9_epitope_Rep5 943.5086939490698 943.50758993586 38.514 2 0.12424592765403684 0.0010320311902759728 0.005466061385345421 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 134111 18338 VYKVPPFTF True PC9_epitope_Rep6 1096.59571804832 1096.5946299358602 83.179 2 0.12424408802223634 0.0010320311902759728 0.00546629158913754 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 7714 4771 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep2 990.4618036426001 990.46070993586 23.721 2 0.12424398680781622 0.0010320311902759728 0.005466304254960386 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 110961 14202 THAGVRLYF True PC9_epitope_Rep5 1062.5610638750998 1062.5599699358602 59.636 2 0.12424283349730694 0.0010320311902759728 0.005466448580562432 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 7882 7413 ATAGFTIGR True NCI_RA007_Epitope_Rep4 892.4766655447999 892.47556993586 35.156 2 0.12424210238654973 0.0010320311902759728 0.0054665400739021194 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 116305 6129 TTDSSYGQNY True H1975_Epitope_Rep3 1134.4465471849799 1134.44597496793 28.587 1 0.1242364426845295 0.0010320311902759728 0.0054672483963409775 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 107705 6413 SVSAVNLPK True NCI_RA007_Epitope_Rep5 913.5232813840499 913.52218993586 31.339 2 0.12423346444519023 0.0010320311902759728 0.005467621164750296 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1'] 134291 18110 VYNPVIYVF True NCI_RA007_Epitope_Rep3 1112.5906326678798 1112.5895299358601 79.357 2 0.12422004897993233 0.0010320311902759728 0.005469300607060451 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 89517 9020 QYLEQSSKL True PC9_epitope_Rep2 1094.56078909158 1094.5596899358602 40.045 2 0.12421980448415616 0.0010320311902759728 0.005469331219450646 ['ENSG00000176102|ENST00000323959|CSTF3'] 78605 14811 NYSPYVNYF True NCI_RA007_Epitope_Rep3 1165.50802524273 1165.5069299358602 65.684 2 0.12421928505292718 0.0010320311902759728 0.005469396256024847 ['ENSG00000156162|ENST00000414645|DPY19L4'] 8960 20599 AVGELLQEV True PC9_epitope_Rep5 956.51786165044 956.51676993586 84.281 2 0.12421667505479493 0.0010320311902759728 0.00546972305827522 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 133833 19965 VYGFLRNGF True PC9_epitope_Rep5 1071.5501648382299 1071.5490699358602 81.848 2 0.12421165943229512 0.0010320311902759728 0.005470351126502233 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 48544 18708 KALQFLEEV True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 80.04 2 0.12421152581656116 0.0010320311902759728 0.005470367859149723 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 87190 21992 QPILLELEA True PC9_epitope_Rep1 1024.580461907 1024.57987496793 89.413 1 0.12420986656421013 0.0010320311902759728 0.005470575650867728 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 95762 14865 RYIANTVEL True PC9_epitope_Rep3 1077.58185888933 1077.5807699358602 62.315 2 0.12420487648733212 0.0010320311902759728 0.005471200615460667 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 86006 9680 QHLQATGVSL True PC9_epitope_Rep6 1052.56145779792 1052.56036993586 47.613 2 0.1241971026745137 0.0010320311902759728 0.005472174358621691 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 111060 15686 THDITTISI True PC9_epitope_Rep1 999.52367530687 999.52256993586 65.158 2 0.12419349687013802 0.0010320311902759728 0.005472626077170254 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 48167 12571 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62676490379 53.354 3 0.12419008708645649 0.0010320311902759728 0.005473053272757738 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 96347 7813 RYSSM[Oxidation]AASF True PC9_epitope_Rep5 1034.44913084806 1034.4480299358602 34.997 2 0.124188931798161 0.0010320311902759728 0.005473198020745974 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 136986 15191 YAITTLHNL True PC9_epitope_Rep4 1044.5603951687601 1044.55928993586 66.355 2 0.124187936474901 0.0010320311902759728 0.005473322729456961 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant', 'ENSG00000173801|ENST00000393931|JUP'] 95825 15612 RYIPTAAAF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 65.063 2 0.1241702251040171 0.0010320311902759728 0.005475542335620184 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 116914 9125 TVFSHAQTV True PC9_epitope_Rep1 988.4977949121999 988.49668993586 39.951 2 0.12416058715096984 0.0010320311902759728 0.005476750543720318 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 96839 6516 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42828993586 29.867 2 0.12415870170724827 0.0010320311902759728 0.005476986932375079 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 104959 14395 SRDGMNIVL True PC9_epitope_Rep4 1003.5120650773499 1003.51096993586 63.28 2 0.12415628055275395 0.0010320311902759728 0.005477290500753965 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 91651 17086 RISGETIFVTA True PC9_epitope_Rep5 1192.64518742188 1192.6440899358602 70.743 2 0.1241560620749752 0.0010320311902759728 0.005477317894672218 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 37888 17765 GYSEHFVEF True PC9_epitope_Rep2 1113.47672511445 1113.47562993586 73.621 2 0.12415155864695704 0.0010320311902759728 0.0054778825885833824 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 17441 5425 EHDTTEYKL True PC9_epitope_Rep4 1134.51931820242 1134.51766490379 27.6 3 0.1241504156069227 0.0010320311902759728 0.005478025925751213 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 117095 23515 TVISLLTGL True PC9_epitope_Rep1 915.56408356687 915.5635349679301 95.237 1 0.12414872583195316 0.0010320311902759728 0.005478237830186042 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 72898 19106 MPTLPPPSV True PC9_epitope_Rep3 937.49428975489 937.49318993586 78.715 2 0.12414709227278431 0.0010320311902759728 0.005478442692572395 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 49098 8284 KEIEYVETV True H1975_Epitope_Rep1 1108.5652057656798 1108.5641099358602 36.796 2 0.12414572211422858 0.0010320311902759728 0.0054786145280414 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 75553 12894 NLAENISRV True PC9_epitope_Rep1 1014.54580773378 1014.5447099358599 54.47 2 0.12413069483498254 0.0010320311902759728 0.005480499488301169 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 98352 6221 SEYIHAQVA True NCI_RA007_Epitope_Rep5 1016.4927095317598 1016.49160993586 30.606 2 0.12411478429741658 0.0010320311902759728 0.005482495933333703 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 124712 16087 VHAEEVIVL True PC9_epitope_Rep2 1007.5651461960299 1007.56404993586 67.135 2 0.12411417921263855 0.0010320311902759728 0.005482571873082595 ['ENSG00000120733|ENST00000314358|KDM3B'] 134189 20786 VYLPPEAFTF True PC9_epitope_Rep6 1182.5961119711399 1182.5950099358602 92.72 2 0.12411310559632381 0.0010320311902759728 0.005482706617321719 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 105838 5287 SSLNLRET True NCI_RA007_Epitope_Rep5 918.47705946762 918.47596993586 27.032 2 0.12411002965320841 0.0010320311902759728 0.005483092681592633 ['ENSG00000026025|ENST00000544301|VIM'] 66149 12472 LSEPEEAAALY True H1975_Epitope_Rep1 1191.5659340416698 1191.56537496793 53.012 1 0.12410703745274626 0.0010320311902759728 0.005483468260805112 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF'] 115001 16780 TRAEWMIAA True PC9_epitope_Rep5 1047.5171504577897 1047.51604993586 69.55 2 0.12410079455061836 0.0010320311902759728 0.005484251947295055 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 142491 21383 YYIEGIENSVF True PC9_epitope_Rep4 1332.62378327096 1332.62268993586 90.418 2 0.12409964551789437 0.0010320311902759728 0.005484396200086784 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 134710 19675 VYTPTDTLVF True PC9_epitope_Rep6 1154.5859412102598 1154.5848499358601 88.337 2 0.12407957888887575 0.0010320311902759728 0.005486916020365311 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 29778 17053 FVPEIFHRI True PC9_epitope_Rep4 1156.6393141958 1156.63765490379 73.588 3 0.12406955742719497 0.0010320311902759728 0.005488174866722096 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 99219 14275 SHLSDQLTL True PC9_epitope_Rep2 1012.5189242796001 1012.51782993586 60.175 2 0.12406878884051248 0.0010320311902759728 0.005488271424453399 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 5992 7240 APIIAVTR True NCI_RA007_Epitope_Rep4 839.5228874612301 839.5217899358599 34.483 2 0.12406249411740614 0.0010320311902759728 0.005489062294675461 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 3268 5055 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 24.816 2 0.12405389155922246 0.0010320311902759728 0.00549014330228852 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 95099 16777 RVAQLEQVYI True PC9_epitope_Rep2 1217.6768219033297 1217.67572993586 69.78 2 0.12403027864462018 0.0010320311902759728 0.005493111600989751 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 140337 12509 YRDNDSDLAL True PC9_epitope_Rep5 1180.53603089572 1180.5349299358602 53.115 2 0.12402863974218568 0.0010320311902759728 0.0054933176801415465 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 60891 12869 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 54.801 2 0.12402848132644873 0.0010320311902759728 0.0054933376000817925 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 134642 21036 VYSQFITQL True PC9_epitope_Rep2 1097.5757108797297 1097.57460993586 86.368 2 0.12402374813546214 0.0010320311902759728 0.005493932806432539 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 1038 6390 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.41744993586 29.503 2 0.12402146130927649 0.0010320311902759728 0.005494220401124096 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 76510 15056 NQIKEFIYA True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 65.843 2 0.12402042964330559 0.0010320311902759728 0.005494350149811474 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 45635 18574 IRDNFVIVY True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 79.521 2 0.12402006517783153 0.0010320311902759728 0.005494395987959095 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 92085 10260 RKVYSILSL True NCI_RA007_Epitope_Rep3 1077.65462990677 1077.6535299358602 47.432 2 0.12401914506220309 0.0010320311902759728 0.005494511710864121 ['ENSG00000155957|ENST00000358230|TMBIM4'] 134747 17975 VYTSKSDVWSF True PC9_epitope_Rep4 1317.62411762413 1317.6230299358601 77.194 2 0.12401710450135933 0.0010320311902759728 0.0054947683606372 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 107413 20553 SVLNVLHSL True PC9_epitope_Rep3 980.5654805492 980.56438993586 84.32 2 0.12401130467451922 0.0010320311902759728 0.0054954978929611445 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L'] 26247 17039 FHEGDVITL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 70.792 2 0.12400276589293521 0.0010320311902759728 0.005496572117905044 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 30 4129 AAAAPLGAR True NCI_RA007_Epitope_Rep4 796.4555361774 796.45442993586 22.169 2 0.1240006630201216 0.0010320311902759728 0.005496836702252539 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 76056 12162 NM[Oxidation]DNMFESY True H1975_Epitope_Rep3 1165.40561135357 1165.40450993586 51.951 2 0.12398670838869032 0.0010320311902759728 0.005498592796004538 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 69201 9851 LTSKPILL True H1975_Epitope_Rep2 883.5742543277499 883.57314993586 42.878 2 0.12398396213974437 0.0010320311902759728 0.005498938457133831 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 57476 10689 LEDDKISLP True H1975_Epitope_Rep2 1028.5389910178399 1028.5378899358602 46.139 2 0.12397970030230715 0.0010320311902759728 0.005499474922442659 ['ENSG00000132017|ENST00000254337|DCAF15'] 85881 18597 QHFDTIYSI True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 76.558 2 0.12397860334662314 0.0010320311902759728 0.00549961301171369 ['ENSG00000010292|ENST00000315579|NCAPD2'] 8575 16832 ATVPGLLKV True PC9_epitope_Rep5 896.5695033004799 896.56840993586 69.753 2 0.12397604718317261 0.0010320311902759728 0.005499934805209323 ['ENSG00000179820|ENST00000391770|MYADM'] 86149 11077 QIDPTIQRV True PC9_epitope_Rep1 1068.5927579262 1068.5916699358602 47.496 2 0.12397270627690916 0.0010320311902759728 0.0055003554171943764 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 1892 9775 AEIETELQA True H1975_Epitope_Rep2 1002.4869554449798 1002.48584993586 42.586 2 0.12397197681487923 0.0010320311902759728 0.005500447258883269 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 128772 17768 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 73.631 2 0.12397095732832031 0.0010320311902759728 0.005500575618139004 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 71078 21914 LYLENIDEF True PC9_epitope_Rep2 1154.54955570154 1154.5484499358602 89.769 2 0.12396687276925371 0.0010320311902759728 0.005501089917183498 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF', 'ENST00000527458.5_1_11:74303652-74303820:+|nuORF'] 40893 12034 HSIPVTVEV True PC9_epitope_Rep6 979.53384606775 979.53274993586 57.583 2 0.12396551522316471 0.0010320311902759728 0.005501260860299437 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 115710 7986 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.5853349679301 38.512 1 0.1239639940415464 0.0010320311902759728 0.005501452414693104 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 74219 7366 NEGVATYAAA True H1975_Epitope_Rep3 965.4454249861698 965.4448749679301 33.31 1 0.12395917843073152 0.0010320311902759728 0.005502058862294457 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 25374 9690 FEAPATINSA True H1975_Epitope_Rep1 1019.49237517859 1019.49126993586 42.197 2 0.12395752950074178 0.0010320311902759728 0.005502266533169263 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 40891 13411 HSIPVTVEV True PC9_epitope_Rep2 979.53384606775 979.53274993586 56.865 2 0.12395627991837548 0.0010320311902759728 0.005502423914196485 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 54475 17394 KYGPVFSF True PC9_epitope_Rep6 943.4803539429099 943.47924993586 79.522 2 0.12395544392004743 0.0010320311902759728 0.005502529208057386 ['ENSG00000001630|ENST00000003100|CYP51A1'] 44514 21509 ILLPQFLGV True PC9_epitope_Rep6 998.6164534928998 998.61534993586 95.608 2 0.12395407596012757 0.0010320311902759728 0.005502701506656063 ['ENSG00000099282|ENST00000373290|TSPAN15'] 111255 19452 THLEGVLLL True PC9_epitope_Rep4 993.5858816406098 993.58478993586 82.937 2 0.123950766107576 0.0010320311902759728 0.005503118414238938 ['ENSG00000204839|ENST00000398882|MROH6'] 65900 10286 LSDPGSGLY True H1975_Epitope_Rep3 907.4287122928699 907.42816496793 44.616 1 0.12394635778215601 0.0010320311902759728 0.00550367373303221 ['ENSG00000182108|ENST00000331808|DEXI'] 137140 10510 YAVEGRDL True PC9_epitope_Rep3 921.4555957470499 921.45448993586 45.364 2 0.12394367282526442 0.0010320311902759728 0.005504011985191002 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 141626 14998 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.49117496793 62.935 1 0.12392984110354043 0.0010320311902759728 0.005505754834817831 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 31379 10072 GDSVIVVLR True NCI_RA007_Epitope_Rep5 956.5654805492 956.56438993586 45.379 2 0.12392696781647308 0.0010320311902759728 0.0055061169477381745 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 72813 8704 M[Oxidation]PGFAPLTSR True H1975_Epitope_Rep3 1091.54336558607 1091.54226993586 38.479 2 0.12392276468761873 0.0010320311902759728 0.005506646699194055 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000450755.1_1_X:122696050-122696458:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 24426 12231 FADGHVLEL True H1975_Epitope_Rep2 999.5025459394699 999.50144993586 52.131 2 0.1239180615605887 0.0010320311902759728 0.005507239528308192 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 99768 21874 SIIQRLLEV True PC9_epitope_Rep3 1069.64954452633 1069.64844993586 89.441 2 0.12391793319741524 0.0010320311902759728 0.005507255709361254 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 17421 10505 EHDPVGQMV True PC9_epitope_Rep1 1010.44913046762 1010.44802993586 45.297 2 0.12391414248594271 0.0010320311902759728 0.005507733575377373 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 105847 11056 SSLPTQLFK True NCI_RA007_Epitope_Rep4 1019.5651461960299 1019.56404993586 49.397 2 0.12391390530022157 0.0010320311902759728 0.0055077634769181 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 131575 20123 VTLGPVPEI True PC9_epitope_Rep4 923.53278343859 923.53168993586 85.538 2 0.12391161550033748 0.0010320311902759728 0.005508052155695835 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 90066 8072 REAEEPVFAA True H1975_Epitope_Rep2 1117.54038800017 1117.53928993586 35.996 2 0.12390681591159326 0.0010320311902759728 0.005508657295707506 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 88169 9058 QRVGQAVNL True PC9_epitope_Rep5 983.5512274673898 983.55012993586 39.786 2 0.12390539196827524 0.0010320311902759728 0.005508836841339329 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 24113 16947 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 70.429 2 0.12390282459803863 0.0010320311902759728 0.005509160576652583 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 11967 14535 DHNINLVSM True PC9_epitope_Rep6 1041.4913296327702 1041.49022993586 67.803 2 0.12390083522680183 0.0010320311902759728 0.005509411441373792 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 92816 14357 RPAQPTLWTA True PC9_epitope_Rep1 1139.60874234351 1139.60764993586 60.048 2 0.12389761018642363 0.0010320311902759728 0.005509818150857122 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 54598 16616 KYKGIFNGF True PC9_epitope_Rep5 1072.5705659296398 1072.56946993586 68.919 2 0.12388873936952698 0.0010320311902759728 0.0055109370002869255 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'SLC25A3|p.A284Lfs*8|1|0.17|ENSG00000075415|chr12:98601203-98601203|G/-|frameshift_variant', 'ENST00000547908.1_1_12:98989476-98991822:+|nuORF'] 2571 10374 AEQTLSQLP True H1975_Epitope_Rep3 985.5080252427299 985.50692993586 44.959 2 0.12388684179731571 0.0010320311902759728 0.005511176364248885 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 29864 11693 FVTFDDHD True PC9_epitope_Rep4 994.40322582102 994.40212993586 52.74 2 0.12386361802554816 0.0010320311902759728 0.005514106687351194 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 65371 12358 LRDSFQQVV True PC9_epitope_Rep4 1090.57710786206 1090.5760099358602 55.341 2 0.12385966111655806 0.0010320311902759728 0.005514606113331778 ['ARNT|p.Q581Afs*21|1|0.22|ENSG00000143437|chr1:150816846-150816850|GTTGG/-|frameshift_variant', 'ARNT|p.P578Lfs*28|1|0.36|ENSG00000143437|chr1:150816857-150816857|G/-|frameshift_variant', 'nc|ENSG00000143437|P27540-2|ARNT', 'nc|ENSG00000143437|P27540-3|ARNT', 'nc|ENSG00000143437|P27540-4|ARNT', 'ENSG00000143437|ENST00000358595|ARNT'] 14325 4376 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.131 2 0.12385718298268976 0.0010320311902759728 0.005514918916511416 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 105054 6919 SRDPSVIET True PC9_epitope_Rep3 1002.49818883502 1002.49708993586 31.626 2 0.12384441553076805 0.0010320311902759728 0.005516530767332438 ['ENSG00000172469|ENST00000358812|MANEA', 'MANEA|p.K380Sfs*7|1|0.24|ENSG00000172469|chr6:95606151-95606151|G/-|frameshift_variant', 'MANEA|p.S162C|1|0.17|ENSG00000172469|chr6:95586923-95586923|A/T|missense_variant'] 118337 12438 TYMKDLYQL True NCI_RA007_Epitope_Rep5 1173.5739966275698 1173.57288993586 54.501 2 0.12383832138222406 0.0010320311902759728 0.005517300297175661 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 39036 4309 HHSDGSVSL True PC9_epitope_Rep3 937.42535824793 937.42426993586 21.684 2 0.12383087184344889 0.0010320311902759728 0.005518241119786507 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 138330 12034 YHEDIHTYL True PC9_epitope_Rep2 1189.54038800017 1189.53874490379 51.605 3 0.12382597273578114 0.0010320311902759728 0.005518859927127572 ['ENSG00000145386|ENST00000274026|CCNA2'] 8256 12808 ATGSWDSFLK True NCI_RA007_Epitope_Rep5 1110.53457434374 1110.53346993586 55.945 2 0.12381866377244581 0.0010320311902759728 0.005519783250191487 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 26172 4269 FHDESTQV True PC9_epitope_Rep4 961.41412485789 961.41302993586 22.823 2 0.12381865894611194 0.0010320311902759728 0.005519783859940157 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 45634 19814 IRDNFVIVY True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 81.447 2 0.12381735136887985 0.0010320311902759728 0.005519949058874386 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 99156 13683 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 57.659 2 0.12381702148529261 0.0010320311902759728 0.005519990737037555 ['ENSG00000132646|ENST00000379143|PCNA'] 54014 15442 KVGEAGLLSV True PC9_epitope_Rep1 971.5651461960299 971.56404993586 64.218 2 0.1238081698366096 0.0010567632850241545 0.005521109187427778 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 8556 4575 ATVETTIAR True NCI_RA007_Epitope_Rep3 960.52400966004 960.52290993586 24.882 2 0.12380807218731064 0.0010567632850241545 0.00552112152714618 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 84933 15482 QEEDFVLQV True H1975_Epitope_Rep2 1105.5291546101298 1105.52857496793 64.707 1 0.12380482501887007 0.0010567632850241545 0.005521531879773549 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 77666 8927 NTIDPSHPM True PC9_epitope_Rep3 1010.4491304676201 1010.44802993586 39.288 2 0.12380133607847583 0.0010567632850241545 0.005521972819004815 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 107576 15078 SVPIDLQKV True PC9_epitope_Rep1 997.58079626017 997.57968993586 62.816 2 0.12379822477511078 0.0010567632850241545 0.005522366060806754 ['ENSG00000198056|ENST00000338193|PRIM1'] 24475 19599 FAEGFVRAL True PC9_epitope_Rep1 1008.5392658013598 1008.53816993586 80.215 2 0.12378894227915467 0.0010567632850241545 0.005523539450900174 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 104929 11385 SRDDTTLNAL True PC9_epitope_Rep3 1104.54111627616 1104.54000993586 48.795 2 0.12378586753491658 0.0010567632850241545 0.005523928179769338 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 74802 11077 NHDTGEYVL True PC9_epitope_Rep3 1046.46688870674 1046.4657899358601 47.606 2 0.12378443792157613 0.0010567632850241545 0.005524108929773588 ['ENSG00000144597|ENST00000396842|EAF1'] 76381 15329 NQAKYIPEL True PC9_epitope_Rep5 1074.57095985246 1074.5698699358602 63.974 2 0.12377588939415042 0.0010567632850241545 0.005525189864834091 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 47883 14718 IYIGGQEHF True PC9_epitope_Rep1 1062.5134449763398 1062.5123499358601 61.434 2 0.12376824266054356 0.0010567632850241545 0.005526156946357838 ['ENSG00000158125|ENST00000379416|XDH'] 107236 8603 SVIVQPFSK True NCI_RA007_Epitope_Rep3 1003.57023157647 1003.56912993586 40.916 2 0.1237654141866711 0.0010567632850241545 0.005526514705124353 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-3|ZNF280D', 'nc|ENSG00000285253|Q6N043-6|ZNF280D'] 85795 5041 QHDPSAVAV True PC9_epitope_Rep4 922.4508447197799 922.44974993586 26.021 2 0.12376010981160714 0.0010567632850241545 0.005527185688753939 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 26958 11929 FLDTNETPY True H1975_Epitope_Rep2 1098.48695544498 1098.4858499358602 50.963 2 0.12375733581919575 0.0010567632850241545 0.005527536620202741 ['ENSG00000079246|ENST00000392132|XRCC5'] 125275 19620 VILPKFTAV True PC9_epitope_Rep5 986.6164534929 986.61534993586 80.521 2 0.1237522036051988 0.0010567632850241545 0.005528185942416289 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 68360 14320 LTEPTGLLY True H1975_Epitope_Rep1 1005.5382627418498 1005.53767496793 60.271 1 0.12374576352482254 0.0010567632850241545 0.005529000840165866 ['ENSG00000168758|ENST00000305476|SEMA4C'] 118054 22863 TYFSTPLLL True PC9_epitope_Rep2 1053.57464825057 1053.57354993586 93.432 2 0.12374509967473243 0.0010567632850241545 0.005529084847349755 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 129483 25732 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 108.93 2 0.12374284062059301 0.0010567632850241545 0.0055293707296539575 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 138685 23616 YILPFSEVL True PC9_epitope_Rep5 1079.59029831471 1079.58920993586 95.818 2 0.12373853381147573 0.0010567632850241545 0.005529915794554855 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF'] 96256 12932 RYQFLEEAF True NCI_RA007_Epitope_Rep3 1201.57677350889 1201.57566993586 58.137 2 0.12373457275368004 0.0010567632850241545 0.0055304171480125884 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 105590 10253 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 44.445 2 0.1237306130337054 0.0010567632850241545 0.005530918376634003 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 98936 13474 SHAENILQI True PC9_epitope_Rep6 1023.53490869691 1023.53380993586 63.522 2 0.12372899726612169 0.0010567632850241545 0.005531122916240486 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 43850 11286 IHSPVVNEL True PC9_epitope_Rep6 1006.54474510462 1006.54364993586 54.426 2 0.12372558283670104 0.0010567632850241545 0.005531555172358018 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 108755 18015 SYSHIMALI True PC9_epitope_Rep6 1033.52665251233 1033.52554993586 81.921 2 0.12372512668632503 0.0010567632850241545 0.005531612922078244 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 2872 16765 AEVISLFSA True H1975_Epitope_Rep2 935.49639792987 935.49530993586 69.724 2 0.1237208565890115 0.0010567632850241545 0.005532153555168359 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 36267 10016 GVDVTGPHLY True H1975_Epitope_Rep2 1056.52400966004 1056.52290993586 43.518 2 0.12372068833329572 0.0010567632850241545 0.0055321748589292905 ['ENSG00000136930|ENST00000259457|PSMB7'] 24345 18169 EYVVMTTHF True PC9_epitope_Rep1 1125.5164817514499 1125.5153899358602 74.677 2 0.12371981938646955 0.0010567632850241545 0.005532284882238429 ['ENSG00000022355|ENST00000393943|GABRA1', 'ENSG00000011677|ENST00000370314|GABRA3'] 141909 5377 YVEGVHQQY True H1975_Epitope_Rep3 1121.51417325233 1121.5130699358601 25.749 2 0.1237116261948277 0.0010567632850241545 0.005533322383712763 ['ENSG00000062716|ENST00000262291|VMP1'] 105025 12635 SRDLSSQLL True PC9_epitope_Rep4 1017.54547338061 1017.54436993586 56.439 2 0.12371153298834708 0.0010567632850241545 0.005533334187518398 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 8322 4263 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 23.464 2 0.12370548833612686 0.0010567632850241545 0.0055340997438144395 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 140260 16469 YRAPELLL True PC9_epitope_Rep6 973.5596668927699 973.55856993586 75.767 2 0.12370052294880544 0.0010567632850241545 0.00553472868861558 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 118676 14742 TYTDRVFFL True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 65.399 2 0.12369687890719908 0.0010567632850241545 0.00553519030862988 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 72242 18430 MHGIDPVVL True PC9_epitope_Rep3 979.5160878286299 979.51498993586 76.095 2 0.12369672242275426 0.0010567632850241545 0.005535210132615483 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 112616 12057 TLETVPLER True PC9_epitope_Rep1 1056.5815245361598 1056.5804299358601 51.236 2 0.12369662951192201 0.0010567632850241545 0.005535221902910941 ['nc|ENSG00000122566|P22626|HNRNPA2B1'] 38850 6013 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 28.123 2 0.12369434486491633 0.0010567632850241545 0.005535511338341957 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 111585 20912 TIDDGIFEV True PC9_epitope_Rep4 1007.48114178855 1007.48057496793 88.597 1 0.1236930105624431 0.0010567632850241545 0.005535680384182958 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 8980 13909 AVGKIFSNV True PC9_epitope_Rep5 933.52836676449 933.52726993586 58.521 2 0.12369174061620955 0.0010567632850241545 0.005535841281280053 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 35420 17731 GSDVVDWLY True H1975_Epitope_Rep3 1052.48147614172 1052.48097496793 74.129 1 0.12368850585857322 0.0010567632850241545 0.005536251132795748 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 138585 19187 YIDIDPLLY True H1975_Epitope_Rep3 1123.58012755383 1123.5795749679298 80.456 1 0.12368745915692003 0.0010567632850241545 0.005536383758757595 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 128635 10090 VPVDTGVAA True PC9_epitope_Rep5 827.4388830537498 827.43833496793 43.794 1 0.12368286576690078 0.0010567632850241545 0.0055369658169539355 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 8203 6781 ATFPDPNVK True NCI_RA007_Epitope_Rep3 987.5025459394699 987.50144993586 33.775 2 0.1236818769002291 0.0010567632850241545 0.0055370911304929125 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 90442 8298 REIQEAIAVA True NCI_RA007_Epitope_Rep4 1098.6033226098998 1098.6022299358601 38.728 2 0.12367874100836741 0.0010567632850241545 0.00553748854288784 ['ENSG00000198218|ENST00000395443|QRICH1'] 108674 20334 SYQKVIELF True PC9_epitope_Rep5 1125.6070110080097 1125.60647496793 83.25 1 0.12367864776032801 0.0010567632850241545 0.005537500360663874 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 119359 14318 VAPEEHPVLL True PC9_epitope_Rep5 1102.60225998074 1102.60116993586 60.076 2 0.12367548881220469 0.0010567632850241545 0.005537900724063432 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 141215 10866 YTAEPVTL True H1975_Epitope_Rep1 892.45419876472 892.4536549679301 46.755 1 0.12366859012686106 0.0010567632850241545 0.0055387751583155075 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA', 'ENST00000482611.5_1_10:103552686-103559078:-|nuORF'] 34908 17879 GQMGSFIRL True PC9_epitope_Rep4 1007.5222358382299 1007.52112993586 76.812 2 0.12365882113007569 0.0010567632850241545 0.005540013646621465 ['ENSG00000119392|ENST00000309971|GLE1'] 69273 21939 LTTLELLEV True PC9_epitope_Rep4 1029.5957776179698 1029.59468993586 92.599 2 0.12365618612703683 0.0010567632850241545 0.005540347751972223 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 12738 7315 DLEGLSQR True NCI_RA007_Epitope_Rep1 916.46140940348 916.46030993586 32.446 2 0.12365553059174599 0.0010567632850241545 0.005540430873669359 ['ENSG00000100345|ENST00000216181|MYH9'] 137505 6300 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 29.169 1 0.12365432841347106 0.0010567632850241545 0.005540583312722066 ['ENSG00000127184|ENST00000247655|COX7C'] 46672 8976 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.5496749679298 39.48 1 0.12364913371551903 0.0010567632850241545 0.005541242059946756 ['ENSG00000170348|ENST00000303575|TMED10'] 72860 11287 MPQSGTGVSV True PC9_epitope_Rep1 961.45388149489 961.45278993586 48.296 2 0.12364897410301735 0.0010567632850241545 0.005541262301855403 ['ENSG00000115233|ENST00000409682|PSMD14'] 54483 19692 KYGVTFYNF True PC9_epitope_Rep2 1137.54949613189 1137.54838993586 81.131 2 0.12364719405349882 0.0010567632850241545 0.005541488050982495 ['ENST00000510737.1_1_4:120160395-120160458:+|nuORF'] 9467 8156 AVVIVDDR True PC9_epitope_Rep1 885.4919812557699 885.49088993586 36.202 2 0.123644246869259 0.0010567632850241545 0.0055418618380643405 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 95680 15062 RYFENPQVI True PC9_epitope_Rep2 1164.5927579262 1164.5916699358602 63.193 2 0.12364170238360771 0.0010567632850241545 0.0055421845713313255 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 76037 14504 NMDNMFESY True H1975_Epitope_Rep1 1149.41069635357 1149.4101749679298 60.992 1 0.12364154638881164 0.0010567632850241545 0.005542204357740287 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 117231 20505 TVLQELINV True PC9_epitope_Rep6 1027.5913609438699 1027.59026993586 91.603 2 0.12363889997249015 0.0010567632850241545 0.005542540040220459 ['ENSG00000138160|ENST00000260731|KIF11'] 72043 19034 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 79.014 2 0.12363497936859909 0.0010567632850241545 0.00554303738256236 ['ENSG00000198712|ENST00000361739|MT-CO2'] 6915 13640 AQIGSYVHV True PC9_epitope_Rep5 972.50288029264 972.50178993586 57.489 2 0.123633481491742 0.0010567632850241545 0.005543227405027957 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 76574 20030 NQLDSLMGL True PC9_epitope_Rep6 989.48518162317 989.48408993586 89.712 2 0.1236317994726245 0.0010567632850241545 0.005543440795606598 ['ENSG00000135148|ENST00000412615|TRAFD1'] 120324 16661 VEEAFVPVI True H1975_Epitope_Rep2 1001.5433481222899 1001.54224993586 69.321 2 0.12363124509453514 0.0010567632850241545 0.0055435111289486565 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENSG00000218823|ENST00000404991|PAPOLB'] 115879 9533 TSERGSFSLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 41.641 2 0.12362955806109457 0.0010567632850241545 0.005543725166412605 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12'] 140553 19272 YRPPELLL True PC9_epitope_Rep2 999.5753169569099 999.57420993586 79.503 2 0.12362714178827128 0.0010567632850241545 0.005544031738099564 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 2145 4942 AELPSRAP True H1975_Epitope_Rep3 839.45011644379 839.44900993586 24.137 2 0.12362069641404302 0.0010567632850241545 0.005544849595031123 ['ENST00000403892.7_1_22:37414793-37415237:-|nuORF'] 133205 10762 VVSEGVPRI True PC9_epitope_Rep4 954.5498304850599 954.54872993586 49.153 2 0.12362025383204836 0.0010567632850241545 0.005544905758828336 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 43834 13340 IHSPVVNEL True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 56.172 2 0.12359505790497075 0.0010567632850241545 0.005548104048817412 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 12693 12754 DLDSRVLYY True H1975_Epitope_Rep2 1142.5607890915799 1142.56027496793 54.161 1 0.12359349350171435 0.0010567632850241545 0.005548302688690291 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 77243 8898 NRYDGIYKV True PC9_epitope_Rep2 1126.5771078620598 1126.5754649037901 39.582 3 0.12359283671972802 0.0010567632850241545 0.005548386085561819 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 22271 8396 ETDAQSITY True H1975_Epitope_Rep3 1026.4505699362599 1026.4494699358602 37.279 2 0.12359223715663219 0.0010567632850241545 0.005548462217964087 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 71856 15055 MELITPISA True H1975_Epitope_Rep3 973.5154191222899 973.51487496793 63.302 1 0.12358978189763753 0.0010567632850241545 0.0055487739969332745 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 104930 11478 SRDDTTLNAL True PC9_epitope_Rep3 1104.54111627616 1104.54000993586 49.146 2 0.12358812178911233 0.0010567632850241545 0.005548984814119584 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 39935 16712 HPIEPVLITA True PC9_epitope_Rep1 1088.62299542532 1088.62188993586 69.11 2 0.12358463856501624 0.0010567632850241545 0.0055494271742507146 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 90324 4699 REFDRRFSP True NCI_RA007_Epitope_Rep3 1208.6050539453997 1208.60341490379 25.427 3 0.12358212435154214 0.0010567632850241545 0.005549746494086248 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 128066 11989 VPLAIVNKA True PC9_epitope_Rep1 923.58040233735 923.57930993586 50.979 2 0.12358013473925095 0.0010567632850241545 0.005549999199251836 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 118699 11419 TYTDVTPRQF True PC9_epitope_Rep6 1226.59315184902 1226.5920499358601 54.983 2 0.1235701424304282 0.0010567632850241545 0.0055512685154439235 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 90123 4446 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 24.29 2 0.1235688628860329 0.0010567632850241545 0.00555143107562773 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 35777 14828 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.5172549679301 62.3 1 0.12356310158331969 0.0010567632850241545 0.005552163080176711 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 97586 7733 SEETPLTAA True H1975_Epitope_Rep2 917.4341915961298 917.43364496793 34.697 1 0.12356306231606613 0.0010567632850241545 0.005552168069617103 ['ENSG00000182154|ENST00000371443|MRPL41'] 107703 6224 SVSAVNLPK True NCI_RA007_Epitope_Rep3 913.5232813840499 913.52218993586 31.487 2 0.12356087499177214 0.0010567632850241545 0.00555244600594997 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1'] 103998 14777 SQDARFYAL True PC9_epitope_Rep2 1069.51925863277 1069.5181699358602 62.104 2 0.1235605978557556 0.0010567632850241545 0.005552481221713519 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 88171 16768 QRVPLSVQL True PC9_epitope_Rep1 1038.61857875122 1038.61748993586 69.322 2 0.1235498436976483 0.0010567632850241545 0.005553847924993778 ['ENSG00000125826|ENST00000356286|RBCK1'] 76502 17459 NQIGAKFWEV True PC9_epitope_Rep6 1190.60840799034 1190.60730993586 79.778 2 0.12354408159827156 0.0010567632850241545 0.005554580342864788 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 8195 6669 ATFGTQVVEK True NCI_RA007_Epitope_Rep4 1078.56587447202 1078.56476993586 32.274 2 0.12354111154900259 0.0010567632850241545 0.0055549579014351575 ['ENSG00000125730|ENST00000245907|C3'] 119856 7384 VDEVGGEALGR True PC9_epitope_Rep6 1100.5462016565998 1100.5451099358602 37.612 2 0.12354067337736034 0.0010567632850241545 0.0055550136048129325 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'CON__P02070', 'CON__Q3SX09'] 26050 10918 FGIDRPAEL True H1975_Epitope_Rep2 1016.5290950404799 1016.52798993586 47.027 2 0.12353689873060214 0.0010567632850241545 0.00555549348639152 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 95720 14829 RYGDLVDYL True NCI_RA007_Epitope_Rep5 1112.5502244078798 1112.54912993586 63.711 2 0.12351945764656992 0.0010567632850241545 0.005557711348164834 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 52825 11863 KPANLLISA True PC9_epitope_Rep2 925.55966689277 925.55856993586 50.957 2 0.12351498612240787 0.0010567632850241545 0.005558280100515957 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 107849 6153 SVVGNFQEK True NCI_RA007_Epitope_Rep4 1006.5083595959 1006.50726993586 30.279 2 0.12349410650737971 0.0010567632850241545 0.005560936622827887 ['ENSG00000180061|ENST00000326652|TMEM150B'] 32426 19876 GFTIPEAFR True PC9_epitope_Rep1 1036.53418042092 1036.53308993586 81.271 2 0.12348531770419782 0.0010567632850241545 0.0055620551977419086 ['ENSG00000213719|ENST00000375784|CLIC1'] 104748 13717 SQVPEVTTV True PC9_epitope_Rep2 958.49712620586 958.49602993586 58.053 2 0.1234812423687107 0.0010567632850241545 0.005562573951546273 ['ENSG00000196455|ENST00000356763|PIK3R4'] 48235 13302 IYQKAFDLI True NCI_RA007_Epitope_Rep4 1109.6120963884498 1109.61098993586 58.308 2 0.12347960571946599 0.0010567632850241545 0.005562782295708047 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 13973 6506 DRDPASGTAL True PC9_epitope_Rep4 1001.47778774361 1001.47668993586 32.147 2 0.1234777389967965 0.0010567632850241545 0.0055630199373631305 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 34996 6042 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 28.632 2 0.12346837281664637 0.0010567632850241545 0.005564212441595457 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 116882 15898 TVFDEAIRA True PC9_epitope_Rep5 1020.5240096600398 1020.52290993586 66.142 2 0.12346665430382305 0.0010567632850241545 0.005564431270220668 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 99129 13311 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 56.476 2 0.12346615539101262 0.0010567632850241545 0.005564494801382706 ['ENSG00000132646|ENST00000379143|PCNA'] 12072 19935 DHTVGFIL True PC9_epitope_Rep2 900.4705175351999 900.46942993586 82.077 2 0.12345669022470494 0.0010567632850241545 0.005565700222718052 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 130058 10260 VSDAVATYY True H1975_Epitope_Rep3 987.4549270407101 987.4543749679301 44.513 1 0.12345637556128258 0.0010567632850241545 0.005565740300573039 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF'] 29560 20822 FVIDGFDEL True PC9_epitope_Rep6 1053.50187723313 1053.50137496793 92.864 1 0.12345367235098505 0.0010567632850241545 0.00556608461302115 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 38968 17030 HHIYLEGTLL True PC9_epitope_Rep2 1194.6397081186199 1194.63805490379 70.756 3 0.12345195394828722 0.0010567632850241545 0.005566303499709204 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 139409 20992 YLPDSLTQL True PC9_epitope_Rep2 1048.54407639828 1048.5429699358601 86.196 2 0.12345175039312521 0.0010567632850241545 0.005566329428715647 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 85051 14400 QEIGAQMVLP True H1975_Epitope_Rep2 1084.5586809166 1084.55758993586 60.539 2 0.12344961310566646 0.0010567632850241545 0.005566601685105853 ['ENST00000520503.1_1_8:33318275-33319160:-|nuORF', 'ENST00000327671.9_1_8:33311020-33319160:-|nuORF', 'ENST00000518672.5_1_8:33310907-33319160:-|nuORF'] 6911 13832 AQIGSYVHV True PC9_epitope_Rep3 972.50288029264 972.50178993586 58.285 2 0.12344611177384271 0.0010567632850241545 0.0055670477272040005 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 137673 13107 YEIPSNLTP True H1975_Epitope_Rep3 1032.51277627 1032.51166993586 55.661 2 0.12344014557569956 0.0010567632850241545 0.005567807854476839 ['ENSG00000069248|ENST00000261396|NUP133'] 16288 13427 EEFPSFGA True H1975_Epitope_Rep3 882.3759484440199 882.3753949679301 56.917 1 0.12343643747695458 0.0010567632850241545 0.005568280338363189 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 2889 7828 AEVRVIAPP True H1975_Epitope_Rep1 950.5549158654998 950.55380993586 35.061 2 0.1234335516299693 0.0010567632850241545 0.005568648078550474 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 43436 8339 IGGIGTVPVGR True NCI_RA007_Epitope_Rep5 1024.6029286870798 1024.60182993586 38.75 2 0.12342085242332022 0.0010567632850241545 0.00557026660652656 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 118341 19379 TYMKDLYQL True PC9_epitope_Rep3 1173.5739966275698 1173.57288993586 79.765 2 0.12341643137477729 0.0010567632850241545 0.005570830182145582 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 43925 22074 IIDDTIFNL True PC9_epitope_Rep4 1062.55972646242 1062.5586299358602 93.125 2 0.1234159583699454 0.0010567632850241545 0.005570890482005177 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 140288 11179 YRAQPSVSL True PC9_epitope_Rep1 1019.5399940773499 1019.53888993586 47.884 2 0.1234141624328637 0.0010567632850241545 0.005571119438453896 ['ENSG00000239306|ENST00000310137|RBM14'] 106487 20666 STLDGVLEV True PC9_epitope_Rep2 931.48622716899 931.4856749679301 84.928 1 0.12340907422236025 0.0010567632850241545 0.005571768162992079 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6'] 77501 14043 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41816993586 59.18 2 0.12340807799653822 0.0010567632850241545 0.00557189518607566 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 129193 10130 VQSNRILGV True PC9_epitope_Rep4 984.5716285587998 984.57052993586 46.64 2 0.12340386942168542 0.0010567632850241545 0.005572431828786904 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 97977 7248 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.4183249679301 32.851 1 0.12340205136744432 0.0010567632850241545 0.005572663667701857 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 52876 11417 KPFGQVIST True PC9_epitope_Rep5 975.5389314481899 975.53782993586 48.915 2 0.12339555888578486 0.0010567632850241545 0.005573491668323501 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 114093 22072 TPFTGPFISV True PC9_epitope_Rep2 1064.55424715916 1064.5531499358601 90.373 2 0.12339315761293793 0.0010567632850241545 0.005573797938500722 ['ENSG00000164142|ENST00000435205|FHIP1A'] 18100 14828 EIIDLVLDR True H1975_Epitope_Rep3 1084.61282466444 1084.61172993586 62.417 2 0.1233878295752502 0.0010567632850241545 0.005574477561537782 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 110998 14792 THASQIELL True PC9_epitope_Rep3 1010.5396597241798 1010.53856993586 62.031 2 0.12338705789308821 0.0010567632850241545 0.0055745760009336875 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 69658 6941 LVDSNNPKI True PC9_epitope_Rep2 998.53965972418 998.53856993586 32.099 2 0.1233848349667928 0.0010567632850241545 0.005574859577350514 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 29294 19841 FVCDIRPEI True PC9_epitope_Rep5 1090.5481162329 1090.5470099358602 81.366 2 0.12338245148884205 0.0010567632850241545 0.005575163650866756 ['ENSG00000136888|ENST00000374050|ATP6V1G1'] 131183 10599 VTELHVISY True H1975_Epitope_Rep2 1059.5600608155898 1059.5589699358602 45.791 2 0.12337402328331602 0.0010567632850241545 0.005576239014076165 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 39750 16264 HLVPEVPTV True PC9_epitope_Rep2 989.55458151233 989.55348993586 67.8 2 0.12337161862316423 0.0010567632850241545 0.00557654586431379 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 117932 15454 TWTEVSYTF True NCI_RA007_Epitope_Rep3 1132.5076908895599 1132.5065899358601 68.343 2 0.12336969802968469 0.0010567632850241545 0.0055767909563778995 ['ENSG00000116663|ENST00000376753|FBXO6'] 141023 11457 YSLDHISSL True H1975_Epitope_Rep2 1033.5080252427301 1033.5069299358602 49.124 2 0.1233650104786237 0.0010567632850241545 0.005577389191571851 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 73029 16591 MRDITPNLL True PC9_epitope_Rep4 1071.57466533391 1071.5735699358602 71.793 2 0.12336497993391853 0.0010567632850241545 0.00557739308995784 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 26051 10806 FGIDRPAEL True H1975_Epitope_Rep3 1016.5290950404799 1016.52798993586 46.645 2 0.1233610482170596 0.0010567632850241545 0.005577894912782695 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 27355 17216 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55805496793 71.864 1 0.12335937502843328 0.0010567632850241545 0.005578108482831428 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 49932 17788 KILEDVVGV True PC9_epitope_Rep5 970.5698972232999 970.56880993586 73.439 2 0.12334123403151243 0.0010567632850241545 0.005580424559797948 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 6716 8609 AQAPDLQRV True PC9_epitope_Rep5 996.5352430500799 996.53414993586 38.058 2 0.1233394623831129 0.0010567632850241545 0.005580650798156517 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 45440 17084 IQIMKVEEI True PC9_epitope_Rep4 1101.61038213629 1101.60928993586 73.71 2 0.12332864018437892 0.0010567632850241545 0.005582032980929857 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 105057 15008 SRDPVQLNL True PC9_epitope_Rep1 1040.56145779792 1040.56036993586 62.549 2 0.123324444830428 0.0010567632850241545 0.005582568890647499 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 27890 11240 FQDRPVSSL True PC9_epitope_Rep1 1047.53490869691 1047.53380993586 48.114 2 0.12332077348480004 0.0010567632850241545 0.0055830379054669374 ['ENSG00000130147|ENST00000392011|SH3BP4'] 21590 4326 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 23.699 2 0.12331653592404059 0.0010567632850241545 0.00558357930229294 ['ENSG00000180921|ENST00000388913|FAM83H'] 73462 15578 MVAPAVASV True PC9_epitope_Rep5 843.4524249429099 843.45132993586 64.931 2 0.12331573808003991 0.0010567632850241545 0.005583681241733448 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 15081 20035 DYSSILQKF True PC9_epitope_Rep4 1099.55497543515 1099.55447496793 85.202 1 0.12329360498677265 0.0010567632850241545 0.005586509883358463 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 74239 7236 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 32.767 2 0.12329299729449852 0.0010567632850241545 0.005586587567101978 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 19762 20381 ELSDFISYL True H1975_Epitope_Rep3 1085.52809198097 1085.52698993586 85.216 2 0.12328964279293364 0.0010567632850241545 0.005587016405537868 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 61098 21983 LIIDEIHLL True PC9_epitope_Rep1 1077.64339651673 1077.6422899358602 89.379 2 0.12328748480324701 0.0010567632850241545 0.005587292299301743 ['ENSG00000112249|ENST00000369162|ASCC3'] 34821 18446 GQIEVVPEV True PC9_epitope_Rep4 968.5178616504398 968.51676993586 79.023 2 0.12328706740542777 0.0010567632850241545 0.005587345664143086 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 103894 17066 SQADVIPAV True PC9_epitope_Rep5 898.4759968384599 898.47544496793 70.664 1 0.12328482415237803 0.0010567632850241545 0.005587632475441845 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 115826 8729 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41837496793 38.58 1 0.12328212260324038 0.0010567632850241545 0.005587977901354474 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 1124 7668 AEAPPAYTP True H1975_Epitope_Rep3 915.4337976733101 915.43270993586 34.476 2 0.12327297862311422 0.0010567632850241545 0.005589147225552275 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 77138 6343 NRPGTVSSL True PC9_epitope_Rep1 929.49304388493 929.49194993586 29.209 2 0.12327207864512833 0.0010567632850241545 0.005589262326899196 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 95069 19479 RTVELFYDV True PC9_epitope_Rep2 1140.5815245361598 1140.5804299358601 80.305 2 0.12326938369894275 0.0010567632850241545 0.005589607006914409 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF', 'ENST00000489654.1_1_7:142960606-142961286:+|nuORF', 'ENST00000473649.1_1_7:142960606-142961786:+|nuORF', 'nc|ENSG00000197448|Q9Y2Q3-4|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-3|GSTK1', 'ENSG00000197448|ENST00000358406|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-2|GSTK1'] 142338 11140 YYEEQHPEL True PC9_epitope_Rep5 1206.5193182024198 1206.51822993586 47.835 2 0.12326606829762726 0.0010567632850241545 0.005590031070857607 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 24125 18779 EYPELRGVF True PC9_epitope_Rep4 1108.5553097883198 1108.5542099358602 80.317 2 0.12326599595393999 0.0010567632850241545 0.005590040324492515 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 78436 18884 NYLSIFRKF True PC9_epitope_Rep4 1186.6498788795 1186.6482449037899 80.723 3 0.12326535229976163 0.0010567632850241545 0.005590122656327742 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 10039 21926 AYSEAIFEL True PC9_epitope_Rep2 1041.50187723313 1041.50137496793 89.814 1 0.12326107710000359 0.0010567632850241545 0.005590669540735929 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP'] 68630 22904 LTIEDGIFEV True PC9_epitope_Rep1 1134.58085582982 1134.57974993586 92.898 2 0.12325998868492735 0.0010567632850241545 0.00559080877937446 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 64733 16337 LPWQGLKAA True PC9_epitope_Rep5 982.5600012459398 982.55890993586 67.837 2 0.12325908798071815 0.0010567632850241545 0.005590924007125885 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 23973 19504 EYMAQHLVF True PC9_epitope_Rep5 1136.5324661687598 1136.53136993586 80.076 2 0.12325229874887632 0.0010567632850241545 0.005591792633355896 ['ENST00000473429.5_1_1:110591964-110592183:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-3|STRIP1', 'ENST00000485775.5_1_1:110582506-110596531:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-2|STRIP1', 'ENSG00000143093|ENST00000369795|STRIP1'] 118194 18508 TYKDYVDLF True PC9_epitope_Rep6 1162.55464108198 1162.55354993586 83.832 2 0.12324801870129337 0.0010567632850241545 0.005592340298043992 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 134420 13784 VYPLMKEYF True NCI_RA007_Epitope_Rep3 1188.5889184157197 1188.58782993586 61.549 2 0.12323929096395986 0.0010567632850241545 0.00559345724122599 ['ENSG00000100109|ENST00000407690|TFIP11'] 8522 8108 ATSVITIVK True NCI_RA007_Epitope_Rep5 930.57498260374 930.57388993586 37.874 2 0.12323525450388824 0.0010567632850241545 0.005593973886141941 ['ENSG00000197063|ENST00000357736|MAFG'] 73591 12284 MVVQDGIVKA True PC9_epitope_Rep1 1058.57941636118 1058.57830993586 52.104 2 0.12323481174744105 0.0010567632850241545 0.005594030559399959 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 17188 13854 EGSPIKVTL True PC9_epitope_Rep4 942.53859709502 942.53750993586 61.19 2 0.12323340922381512 0.0010567632850241545 0.005594210087505239 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF'] 105311 11178 SRPENAIIY True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 47.88 2 0.12322902651208553 0.0010567632850241545 0.005594771126835228 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 104942 19821 SRDELLQVL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 81.287 2 0.1232277654292106 0.0010567632850241545 0.005594932570675819 ['ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'ENSG00000187446|ENST00000334660|CHP1'] 114340 10912 TPRPVIVEP True PC9_epitope_Rep2 1006.5811306133398 1006.58002993586 47.294 2 0.12322699918312473 0.0010567632850241545 0.005595030667733695 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 85168 5472 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47634993586 26.074 2 0.12321880826259914 0.0010567632850241545 0.005596079398461538 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 21700 18443 ERSNDYFVL True PC9_epitope_Rep2 1141.54038800017 1141.53928993586 76.273 2 0.12321184278826247 0.0010567632850241545 0.005596971379652516 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 105840 5169 SSLNLRETN True NCI_RA007_Epitope_Rep4 1032.51998690876 1032.5188899358602 26.409 2 0.12319676696799123 0.0010567632850241545 0.005598902428049789 ['ENSG00000026025|ENST00000544301|VIM'] 97058 8724 SDDLPLNVSR True H1975_Epitope_Rep1 1114.5618517207402 1114.56074993586 38.485 2 0.12319501763437327 0.0010567632850241545 0.005599126540860099 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 103532 12845 SPRPPLISV True PC9_epitope_Rep6 964.57056592964 964.56946993586 60.92 2 0.12319102264708272 0.0010567632850241545 0.005599638384581464 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 16641 5761 EEQHPELTP True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 27.155 2 0.12318742074358195 0.0010567632850241545 0.005600099905086133 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 7477 9043 ASDAAPLQY True H1975_Epitope_Rep1 934.43961132974 934.4390649679301 39.691 1 0.1231825925136725 0.0010567632850241545 0.005600718616134404 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 103964 17951 SQANRLFYL True PC9_epitope_Rep4 1110.5821932425 1110.58108993586 77.101 2 0.12317341093186604 0.0010567632850241545 0.005601895369846063 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 117294 14718 TVMDSKIVQV True PC9_epitope_Rep5 1118.60054572858 1118.59997496793 61.611 1 0.12317044635170112 0.0010567632850241545 0.005602275375747311 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 108603 13853 SYPDNFLHI True NCI_RA007_Epitope_Rep4 1104.52400966004 1104.52290993586 60.548 2 0.12316775831619382 0.0010567632850241545 0.0056026199554053005 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 73157 8356 MRSPQMVSA True PC9_epitope_Rep1 1005.47357139365 1005.47246993586 36.977 2 0.12316517543576298 0.0010567632850241545 0.005602951074763635 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 114728 16337 TQILSVPKV True PC9_epitope_Rep5 983.6015317047498 983.60042993586 67.837 2 0.12316510771308622 0.0010567632850241545 0.005602959756913473 ['nc|ENSG00000120802|P42166|TMPO'] 114391 14837 TPSPLPTV True PC9_epitope_Rep4 810.4487194614601 810.44762993586 65.01 2 0.12316244856419277 0.0010567632850241545 0.005603300674243876 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 37763 18517 GYADIVQLL True NCI_RA007_Epitope_Rep3 990.5385970950199 990.5380449679301 81.029 1 0.12315777261264838 0.0010567632850241545 0.005603900205873565 ['ENSG00000134996|ENST00000346234|OSTF1'] 77737 4703 NTNPNFVR True PC9_epitope_Rep4 960.4777281739599 960.47662993586 24.631 2 0.1231504426387161 0.0010567632850241545 0.0056048401519070154 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 40385 19531 HQTIVVQLL True PC9_epitope_Rep5 1049.62332977849 1049.62222993586 80.178 2 0.12314890580110822 0.0010567632850241545 0.005605037245084879 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 140284 9167 YRAPGTPTY True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 40.208 2 0.12314362922216343 0.0010567632850241545 0.005605713996526255 ['ENSG00000152102|ENST00000389915|FAM168B'] 133735 9906 VYDTNPAKF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 45.754 2 0.12313034054162506 0.0010567632850241545 0.005607418700218912 ['ENSG00000139433|ENST00000318348|GLTP'] 138147 17676 YGLDYVHNL True PC9_epitope_Rep4 1092.52400966004 1092.52290993586 76.015 2 0.12312460729067348 0.0010567632850241545 0.005608154332030489 ['ENSG00000212907|ENST00000361335|MT-ND4L'] 9557 9790 AWAPKPYHKF True PC9_epitope_Rep5 1243.6502132326698 1243.64857490379 42.626 3 0.12312430188354417 0.0010567632850241545 0.005608193521383009 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 4459 13421 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 56.486 2 0.1231182012450852 0.0010567632850241545 0.005608976401674666 ['ENSG00000181789|ENST00000314797|COPG1'] 74344 7931 NEQEGVPSV True H1975_Epitope_Rep2 957.4403396057298 957.4397949679301 35.452 1 0.12311712844997125 0.0010567632850241545 0.005609114081955997 ['ENSG00000113194|ENST00000261942|FAF2'] 116489 5378 TTNDIVISK True NCI_RA007_Epitope_Rep4 989.53932537101 989.53822993586 27.254 2 0.12311619341637896 0.0010567632850241545 0.005609234084909846 ['ENSG00000113141|ENST00000417647|IK'] 24148 10456 EYQDLLNVK True NCI_RA007_Epitope_Rep5 1120.5764391557198 1120.57534993586 46.85 2 0.12311301498123803 0.0010567632850241545 0.005609642026590645 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 34862 22391 GQLDFSEFL True PC9_epitope_Rep4 1054.49712620586 1054.4960299358602 94.36 2 0.12310989598592494 0.0010567632850241545 0.005610042367595739 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 140230 17706 YQYLLVTAL True NCI_RA007_Epitope_Rep3 1082.60119735158 1082.60010993586 77.632 2 0.12310799311350266 0.0010567632850241545 0.005610286625961669 ['ENSG00000165389|ENST00000298130|SPTSSA'] 134854 12096 VYVERAEVL True PC9_epitope_Rep4 1076.5866099165999 1076.58550993586 54.332 2 0.12310559831197039 0.0010567632850241545 0.005610594044605986 ['ENSG00000089234|ENST00000419234|BRAP'] 32190 8390 GEVTQGFAA True H1975_Epitope_Rep3 878.4133965818997 878.41284496793 37.256 1 0.12310398439207434 0.0010567632850241545 0.00561080123143626 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF', 'ENST00000518740.5_2_3:126326756-126328052:-|nuORF', 'ENSG00000197763|ENST00000524230|TXNRD3', 'ENST00000524230.6_3_3:126326756-126373974:-|nuORF'] 107441 13975 SVLSDLHEA True PC9_epitope_Rep1 969.4767251144501 969.47562993586 58.593 2 0.12310260143958927 0.0010567632850241545 0.005610978773802618 ['ENSG00000173402|ENST00000308775|DAG1'] 26227 10527 FHDPDSAVV True PC9_epitope_Rep5 985.4505103666099 985.44940993586 45.48 2 0.12309638384480198 0.0010567632850241545 0.005611777051732857 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 130958 8760 VTDLAGNEY True H1975_Epitope_Rep1 980.4450906330001 980.44454496793 38.627 1 0.12309468525809605 0.0010567632850241545 0.005611995152867791 ['ENSG00000197081|ENST00000356956|IGF2R'] 65012 20874 LQIDQINTDL True PC9_epitope_Rep1 1171.60846755999 1171.60736993586 85.117 2 0.12309395492762999 0.0010567632850241545 0.005612088930968905 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 104288 14959 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.5754749679301 69.55 1 0.12309164726891789 0.0010567632850241545 0.005612385256021893 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 73603 22232 MVWEGLNVV True PC9_epitope_Rep5 1045.52665251233 1045.52554993586 90.52 2 0.12309145452245084 0.0010567632850241545 0.005612410007171591 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF'] 118723 18398 TYTVRTFAL True PC9_epitope_Rep1 1070.5760452329 1070.57494993586 75.558 2 0.12308990904821712 0.0010567632850241545 0.00561260846999817 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 112431 8487 TLDDESLKY True H1975_Epitope_Rep1 1082.5131701928199 1082.51257496793 37.576 1 0.12308744521001128 0.0010567632850241545 0.005612924879186402 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 100986 20690 SLFRVITEV True PC9_epitope_Rep5 1062.60734536118 1062.6062499358602 84.639 2 0.123084628702057 0.0010567632850241545 0.00561328660005231 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 39234 18748 HIIENIVAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 77.335 2 0.12308360230327137 0.0010567632850241545 0.005613418424936163 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 140080 9205 YQLDQDHNV True PC9_epitope_Rep5 1130.49925146418 1130.49814993586 40.354 2 0.12307023433313692 0.0010567632850241545 0.005615135608550767 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'ENST00000534794.1_1_11:77413524-77475723:-|nuORF'] 122437 7627 VGDVTGAQAY True H1975_Epitope_Rep2 979.4610750503098 979.46052496793 34.29 1 0.12306768263129515 0.0010567632850241545 0.00561546344603725 ['ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000185201|ENST00000616316|IFITM2', 'ENSG00000142089|ENST00000399808|IFITM3'] 83299 10663 PTDGPPNSFY True H1975_Epitope_Rep3 1093.47163973401 1093.4705499358602 46.09 2 0.12305418330712632 0.0010567632850241545 0.005617198123622428 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 30040 18821 FYGPQVNNI True PC9_epitope_Rep1 1050.51344497634 1050.5123499358601 77.182 2 0.12304929742399508 0.0010567632850241545 0.005617826094086762 ['ENSG00000106299|ENST00000223023|WASL'] 107500 12106 SVNGVFKEV True PC9_epitope_Rep2 977.5181960036099 977.51708993586 51.875 2 0.12304867238613565 0.0010567632850241545 0.005617906433612837 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 96904 5160 SAVEDEGLK True PC9_epitope_Rep1 946.4607406971398 946.4596499358599 24.7 2 0.12304031088073646 0.0010567632850241545 0.005618981291669887 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 96348 7911 RYSSM[Oxidation]AASF True PC9_epitope_Rep5 1034.44913084806 1034.4480299358602 35.371 2 0.12303905179907489 0.0010567632850241545 0.005619143162025977 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 108292 19517 SYIPLFPQL True NCI_RA007_Epitope_Rep4 1076.5906326678798 1076.5895299358601 84.336 2 0.12303141635905206 0.0010567632850241545 0.005620124889049339 ['ENSG00000165996|ENST00000361271|HACD1'] 21156 12913 ERATNIEVL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 54.692 2 0.1230281585387797 0.0010567632850241545 0.005620543814520851 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 106766 15173 SVAAQLTGV True PC9_epitope_Rep2 844.4654321547599 844.46432993586 63.619 2 0.12302691242343562 0.0010567632850241545 0.005620704061477565 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 126475 17624 VLLGKVYVV True PC9_epitope_Rep4 988.63210355704 988.63100993586 75.811 2 0.12302589712840474 0.0010567632850241545 0.005620834628891917 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 35907 10964 GTQPWFISK True NCI_RA007_Epitope_Rep5 1062.5498304850598 1062.5487299358601 48.809 2 0.12302138353736779 0.0010567632850241545 0.00562141511473776 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK'] 120152 13585 VEALTTLEVA True H1975_Epitope_Rep1 1044.5702911461199 1044.56918993586 57.383 2 0.12301047626720903 0.0010567632850241545 0.00562281812382767 ['ENSG00000149806|ENST00000529639|FAU'] 54927 16906 KYPSPFFVF True NCI_RA007_Epitope_Rep5 1130.5800679841798 1130.5789699358602 71.787 2 0.12300500855258194 0.0010567632850241545 0.005623521568391231 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 133666 19790 VYAPPVGGF True PC9_epitope_Rep3 905.4647038787698 905.46360993586 81.352 2 0.12300014658832294 0.0010567632850241545 0.0056241471529607295 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 139958 22210 YQDELTALL True PC9_epitope_Rep3 1064.5389910178399 1064.5378899358602 90.717 2 0.1229946079364737 0.0010567632850241545 0.005624859889305921 ['ENSG00000129474|ENST00000262713|AJUBA'] 132395 16457 VVAGRFIEV True PC9_epitope_Rep3 988.5705659296399 988.56946993586 68.44 2 0.12299274836688029 0.0010567632850241545 0.005625099206139599 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 4753 12537 ALDLEIATYR True NCI_RA007_Epitope_Rep1 1163.6186383208699 1163.61807496793 52.745 1 0.12298904761289915 0.0010567632850241545 0.005625575503378246 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 40068 7758 HPTWALKEA True PC9_epitope_Rep4 1051.5450794577898 1051.54398993586 37.232 2 0.1229886503905052 0.0010567632850241545 0.0056256266293409525 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 114372 20211 TPSIPVLTA True PC9_epitope_Rep5 897.51713337445 897.51658496793 82.788 1 0.12298797677735629 0.0010567632850241545 0.005625713330227323 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 140544 4630 YRPGTVALR True NCI_RA007_Epitope_Rep5 1031.5876129761098 1031.58650993586 24.488 2 0.12298345532849135 0.0010567632850241545 0.005626295320687025 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 32019 6373 GEQPASYVS True H1975_Epitope_Rep3 936.41887588516 936.4183249679301 29.497 1 0.12297949701901303 0.0010567632850241545 0.005626804873519233 ['ENSG00000135334|ENST00000257787|AKIRIN2'] 39480 16274 HLDLGILYY True H1975_Epitope_Rep1 1105.58079626017 1105.5796899358602 67.951 2 0.12297830499967367 0.0010567632850241545 0.005626958330912799 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 93059 7217 RPNDIM[Oxidation]AEV True PC9_epitope_Rep4 1059.50189469691 1059.5007899358602 35.065 2 0.12297710865019952 0.0010567632850241545 0.005627112349874787 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 93469 19840 RQIDQFLVVA True PC9_epitope_Rep3 1187.66625721963 1187.6651699358601 81.55 2 0.12297702929450847 0.0010567632850241545 0.005627122566334107 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'MTA3|p.D190Y|1|0.39|ENSG00000057935|chr2:42656268-42656268|G/T|missense_variant', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'MTA2|p.M235Tfs*48|1|0.12|ENSG00000149480|chr11:62596815-62596816|-/TGGCG|frameshift_variant', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 47159 13580 ITVTSEVPFSK True PC9_epitope_Rep6 1206.6496040959798 1206.6485099358601 63.975 2 0.12297275310156643 0.0010567632850241545 0.005627673121449976 ['ENSG00000116251|ENST00000234875|RPL22'] 120434 5213 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.4238049679301 25.138 1 0.12297149462884334 0.0010567632850241545 0.005627835158462701 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 70626 24315 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 105.23 3 0.12296271902276798 0.0010567632850241545 0.005628965205003957 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 77494 15554 NTDDWENFAY True H1975_Epitope_Rep3 1273.48874635013 1273.4876499358602 65.247 2 0.1229571922164183 0.0010567632850241545 0.00562967701322459 ['ENSG00000143669|ENST00000389793|LYST'] 99770 21861 SIIQRLLEV True PC9_epitope_Rep5 1069.64954452633 1069.64844993586 89.125 2 0.12295621320200775 0.0010567632850241545 0.005629803111593283 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 90819 9057 RETETVFVP True H1975_Epitope_Rep1 1076.5502244078798 1076.5496749679298 39.747 1 0.1229558321014662 0.0010567632850241545 0.00562985219860144 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 71977 6980 MESRSFYTA True H1975_Epitope_Rep3 1090.4753452154598 1090.4742499358601 31.81 2 0.12295348511756538 0.0010567632850241545 0.0056301545071108655 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 1143 5540 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 26.317 2 0.12295287007334621 0.0010567632850241545 0.0056302337318839685 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 139981 5096 YQDPHSTAV True PC9_epitope_Rep3 1016.45632402304 1016.45522993586 24.686 2 0.1229509777829912 0.0010567632850241545 0.005630477487499782 ['ENSG00000146648|ENST00000275493|EGFR'] 78658 11646 NYVEVTRKW True PC9_epitope_Rep3 1193.61930702721 1193.61766490379 49.811 3 0.12294291159798511 0.0010567632850241545 0.005631516649968603 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 43841 13641 IHSPVVNEL True PC9_epitope_Rep3 1006.54474510462 1006.54364993586 57.535 2 0.12294281425947026 0.0010567632850241545 0.005631529191185563 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 134836 13078 VYVDLGGSHVF True NCI_RA007_Epitope_Rep4 1191.5924235730301 1191.5913299358601 57.405 2 0.12294166939018929 0.0010567632850241545 0.005631676699638428 ['ENSG00000165733|ENST00000374518|BMS1'] 29657 22364 FVLDEADEML True PC9_epitope_Rep1 1180.53219138524 1180.53108993586 90.84 2 0.12293918690292253 0.0010567632850241545 0.005631996563864964 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 8571 17079 ATVPGLLKV True PC9_epitope_Rep3 896.5695033004799 896.56840993586 70.846 2 0.12293751400419796 0.0010567632850241545 0.005632212124024187 ['ENSG00000179820|ENST00000391770|MYADM'] 49996 20926 KIWEELSVLEV True PC9_epitope_Rep4 1343.73366807311 1343.73256993586 88.651 2 0.12293241405512448 0.0010567632850241545 0.005632869324115654 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 26071 20251 FGLARAFGV True PC9_epitope_Rep3 936.5181364339599 936.51702993586 83.157 2 0.1229314724826576 0.0010567632850241545 0.005632990667163788 ['nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'ENST00000554619.5_1_12:56361683-56363594:+|nuORF', 'ENST00000556656.5_1_12:56361683-56365109:+|nuORF'] 5262 12098 ALPSKLPTF True NCI_RA007_Epitope_Rep5 972.56441792004 972.56332993586 53.191 2 0.1229284335603005 0.0010567632850241545 0.005633382318946033 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 26209 9615 FHDLEGNAV True PC9_epitope_Rep4 1000.4614094034799 1000.46030993586 44.61 2 0.122922704731763 0.0010567632850241545 0.0056341207143010275 ['ENSG00000099219|ENST00000339450|ERMP1'] 137502 6242 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52897496793 29.077 1 0.122919022285556 0.0010567632850241545 0.005634595399073854 ['ENSG00000127184|ENST00000247655|COX7C'] 54486 13175 KYHGYPYSF True PC9_epitope_Rep1 1160.52909504048 1160.52745490379 55.541 3 0.12291878825340627 0.0010567632850241545 0.005634625568250122 ['ENSG00000102158|ENST00000618282|MAGT1', 'nc|ENSG00000104723|Q13454-2|TUSC3'] 31948 16428 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53329496793 68.412 1 0.12291754177204742 0.0010567632850241545 0.005634786255314562 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 40848 13262 HSDTIQWLY True H1975_Epitope_Rep3 1161.54547338061 1161.54436993586 56.27 2 0.12290501417761097 0.0010567632850241545 0.005636401468248613 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 98117 8932 SESFVSPEA True H1975_Epitope_Rep3 951.41854153199 951.4179949679301 39.354 1 0.12288514563196024 0.0010567632850241545 0.005638964096935673 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 21505 17901 ERLSYTQLL True PC9_epitope_Rep4 1121.6080736371698 1121.6069699358602 76.895 2 0.12288457501626371 0.0010567632850241545 0.00563903771132025 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 115468 15323 TRNDIVNML True PC9_epitope_Rep6 1074.54917886206 1074.5480899358602 71.069 2 0.12288025337117599 0.0010567632850241545 0.005639595271634639 ['ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18', 'ENST00000465772.5_1_10:27793310-27827017:+|nuORF'] 32203 7712 GEYDHLPEQA True H1975_Epitope_Rep1 1157.4989171110099 1157.4978299358602 34.626 2 0.12287049166534333 0.0010567632850241545 0.005640854884076798 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 42547 6860 IEESGEHIIA True H1975_Epitope_Rep1 1096.540053647 1096.53894993586 31.431 2 0.1228553036654016 0.0010567632850241545 0.005642815231785158 ['ENSG00000167658|ENST00000309311|EEF2'] 80558 5959 PGPPPPPPP True NCI_RA007_Epitope_Rep3 851.45413919507 851.45304993586 30.42 2 0.12285509630880276 0.0010567632850241545 0.005642842000358547 ['ENST00000375142.5_2_1:19811931-19811970:-|nuORF', 'ENST00000584336.1_1_17:37686825-37687566:+|nuORF', 'ENSG00000125966|ENST00000246186|MMP24', 'ENSG00000099822|ENST00000251287|HCN2', 'ENSG00000182742|ENST00000332503|HOXB4', 'nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3', 'ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'FOXK1|p.R191Pfs*113|1|0.14|ENSG00000164916|chr7:4740844-4740845|-/T|frameshift_variant', 'ENSG00000136928|ENST00000259455|GABBR2', 'ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12'] 142851 15176 YYTDIM[Oxidation]HTL True PC9_epitope_Rep1 1171.5219614351497 1171.5208699358602 63.195 2 0.12283816801220333 0.0010567632850241545 0.005645027767699347 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 45345 20939 IQDEEFYTL True PC9_epitope_Rep3 1156.5288202569598 1156.5277299358602 85.819 2 0.12283801628004269 0.0010567632850241545 0.005645047362973581 ['ENSG00000178502|ENST00000319121|KLHL11'] 130925 11144 VTDFPGFDER True NCI_RA007_Epitope_Rep2 1181.5353026197297 1181.5342099358602 47.928 2 0.12283095768384367 0.0010567632850241545 0.005645959010786422 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 131683 5385 VTNDGATILK True NCI_RA007_Epitope_Rep3 1030.56587447202 1030.56476993586 28.189 2 0.12283069370214919 0.0010567632850241545 0.005645993107943164 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 104832 14783 SRAGLQFPV True PC9_epitope_Rep4 973.53451477409 973.53340993586 64.795 2 0.1228297475349754 0.0010567632850241545 0.005646115321142491 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 127396 8599 VNELTEFAK True H1975_Epitope_Rep1 1049.53932537101 1049.5387749679298 38.006 1 0.1228294205085411 0.0010567632850241545 0.005646157562637982 ['CON__P02769'] 103837 7356 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 33.676 2 0.12282197845166742 0.0010567632850241545 0.005647118925142061 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 124766 16854 VHDEGVWAL True PC9_epitope_Rep4 1024.4977949121999 1024.49668993586 72.81 2 0.12281860131651184 0.0010567632850241545 0.0056475552352069445 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 11858 19890 DHIEELVSL True PC9_epitope_Rep2 1053.53423999057 1053.5331499358601 81.901 2 0.12281802965661412 0.0010567632850241545 0.005647629094256224 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 6583 10311 APVLPHTAV True PC9_epitope_Rep2 903.51780208079 903.51670993586 44.99 2 0.12281699148368971 0.0010567632850241545 0.005647763229687482 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'ENST00000471231.6_1_16:30937150-30941463:+|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B', 'nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 9947 23138 AYMQEPLFVEF True PC9_epitope_Rep2 1372.6373251601196 1372.63622993586 94.488 2 0.1228164864935805 0.0010567632850241545 0.0056478284772339855 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 24275 14460 EYTEKMVSI True PC9_epitope_Rep1 1098.52671208198 1098.52560993586 60.444 2 0.12281578532756708 0.0010567632850241545 0.005647919073027691 ['ENSG00000126749|ENST00000599672|EMG1'] 72806 19778 MPFGNVVSA True PC9_epitope_Rep5 920.4425885351999 920.44203496793 81.121 1 0.12281291328371874 0.0010567632850241545 0.005648290177009018 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 38913 19458 HHFLELVTL True PC9_epitope_Rep4 1107.60767971435 1107.60658993586 82.96 2 0.12280051505765219 0.0010567632850241545 0.005649892456713927 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 54437 15876 KYFLWVVKF True NCI_RA007_Epitope_Rep4 1228.7008518231999 1228.69921490379 68.936 3 0.12279515229338743 0.0010567632850241545 0.005650585649166722 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 31832 10718 GEISALTAEA True H1975_Epitope_Rep1 960.47639076128 960.47584496793 46.188 1 0.12279513019780025 0.0010567632850241545 0.005650588505420831 ['ENSG00000125968|ENST00000376112|ID1'] 106104 10294 STDGKHWWEY True H1975_Epitope_Rep2 1307.5571006934701 1307.55544490379 44.601 3 0.12279292723969597 0.0010567632850241545 0.00565087328467563 ['ENSG00000129315|ENST00000261900|CCNT1'] 95564 18611 RWSPVRPLVF True PC9_epitope_Rep4 1255.71896149883 1255.7173049037901 79.663 3 0.12278323980352668 0.0010567632850241545 0.005652125758811749 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 134829 22032 VYVDDIYVI True PC9_epitope_Rep2 1097.56447748969 1097.5639749679299 90.218 1 0.12277950244794533 0.0010567632850241545 0.005652609028537673 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 4345 14575 AILDYLITK True NCI_RA007_Epitope_Rep4 1048.61684741572 1048.61574993586 63.44 2 0.12277655874188927 0.0010567632850241545 0.005652989701549559 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 49073 13123 KEIEEIPAYLP True H1975_Epitope_Rep2 1300.6914689079597 1300.6903699358602 55.6 2 0.12277568557266609 0.0010567632850241545 0.005653102622524806 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 141145 9882 YSSPYPQEY True H1975_Epitope_Rep2 1132.4713053808398 1132.4707749679299 42.999 1 0.12277501022146134 0.0010567632850241545 0.005653189962568921 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant'] 32086 5208 GESPVPHTV True H1975_Epitope_Rep2 921.45559574705 921.45448993586 25.105 2 0.12277469504696924 0.0010567632850241545 0.00565323072307847 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN'] 8193 11408 ATFFGEVVK True NCI_RA007_Epitope_Rep4 996.5280324113198 996.52692993586 50.796 2 0.12277468241977932 0.0010567632850241545 0.005653232356118572 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1'] 73156 8259 MRSPQMVSA True PC9_epitope_Rep1 1005.47357139365 1005.47246993586 36.602 2 0.12277417405070694 0.0010567632850241545 0.005653298102490239 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 111521 10573 TIAEGFVKA True PC9_epitope_Rep6 934.5123823471798 934.51128993586 51.477 2 0.12276677425331334 0.0010567632850241545 0.005654255188437506 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 138558 13336 YIDAQFEAY True H1975_Epitope_Rep2 1118.49204082542 1118.49094993586 56.429 2 0.12276476767601953 0.0010567632850241545 0.005654514745426558 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10'] 10095 17124 AYTPFHAVL True PC9_epitope_Rep4 1017.5283667644899 1017.52726993586 73.87 2 0.12276449138526095 0.0010567632850241545 0.00565455048540528 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 36625 16393 GVIDLIFEK True NCI_RA007_Epitope_Rep1 1032.58554728744 1032.5844499358602 67.878 2 0.12276215947412808 0.0010567632850241545 0.005654852141847713 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 115077 14974 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61278993586 62.854 2 0.12276214880556639 0.0010567632850241545 0.005654853521970954 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 137761 4838 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 23.699 2 0.12275934774053679 0.0010567632850241545 0.005655215889150094 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 67921 10612 LTDAIDEY True H1975_Epitope_Rep2 938.4232925592601 938.42274496793 45.842 1 0.12275429664626086 0.0010567632850241545 0.005655869394739808 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 140811 15806 YSDLNPEFSL True H1975_Epitope_Rep2 1183.5397192938299 1183.5386299358602 65.985 2 0.12275042826917522 0.0010567632850241545 0.0056563699315139195 ['ENST00000437629.6_2_10:88856696-88911209:+|nuORF'] 97739 10875 SEILYSAPP True H1975_Epitope_Rep1 975.49131254943 975.4907649679301 46.79 1 0.1227479157281323 0.0010567632850241545 0.005656695057265719 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 16590 9305 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39177496793 40.75 1 0.12274697347039168 0.0010567632850241545 0.0056568169912350275 ['ENSG00000026025|ENST00000544301|VIM'] 73242 2765 MSEDKPQDY True H1975_Epitope_Rep2 1111.44919003727 1111.44808993586 14.665 2 0.12273765416354192 0.0010567632850241545 0.005658023105598016 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 124856 13693 VHLDSAVAL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 60.559 2 0.12273693734049901 0.0010567632850241545 0.005658115888001308 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 104829 15479 SRAGLQFPV True PC9_epitope_Rep2 973.53451477409 973.53340993586 64.817 2 0.12272944679480266 0.0010567632850241545 0.005659085520162409 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 115324 10396 TRIEGSVQL True PC9_epitope_Rep4 1001.5505587610498 1001.54946993586 47.691 2 0.12272743857881867 0.0010567632850241545 0.005659345506270957 ['ENSG00000083838|ENST00000594369|ZNF446', 'ENST00000594468.1_1_19:58989018-58989420:+|nuORF', 'ENST00000391694.4_1_19:58988585-58991546:+|nuORF', 'nc|ENSG00000083838|Q9NWS9-2|ZNF446'] 78670 20412 NYVQAVEEF True PC9_epitope_Rep3 1097.5029398622898 1097.50184993586 83.767 2 0.12272680234103492 0.0010567632850241545 0.005659427876833991 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 121710 18434 VFLENVIR True PC9_epitope_Rep5 988.5705659296399 988.56946993586 75.927 2 0.12271615032281116 0.0010567632850241545 0.005660807115258632 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 88673 13666 QTETGTPYMLY True H1975_Epitope_Rep1 1302.5802042068199 1302.57967496793 57.701 1 0.12271418411849463 0.0010567632850241545 0.005661061738137092 ['ENSG00000167325|ENST00000300738|RRM1'] 6357 6328 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 29.37 2 0.12271310549229421 0.0010567632850241545 0.005661201424671634 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 96090 12568 RYLVISEKL True PC9_epitope_Rep4 1119.66519459047 1119.6640899358601 56.167 2 0.12271302693398893 0.0010567632850241545 0.005661211598427416 ['ENSG00000116212|ENST00000371370|LRRC42'] 12652 9005 DLDHSIGTQY True H1975_Epitope_Rep2 1147.51456717515 1147.51346993586 39.589 2 0.12270802250066588 0.0010567632850241545 0.005661859738414372 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 49044 4170 KEGKPPISV True H1975_Epitope_Rep3 953.5545815123298 953.55348993586 21.158 2 0.1227060290342811 0.0010567632850241545 0.005662117938771631 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 26197 21251 FHDHALMIIF True PC9_epitope_Rep3 1242.6219498795 1242.6208499358602 87.035 2 0.1227034266913992 0.0010567632850241545 0.005662455020163351 ['ENSG00000198712|ENST00000361739|MT-CO2'] 86145 10045 QIDPSIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 43.962 2 0.12270243939458714 0.0010567632850241545 0.0056625829098261495 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.R165S|1|0.22|ENSG00000186081|chr12:52519802-52519802|C/A|missense_variant'] 137200 12481 YAYDGKDYLAL True NCI_RA007_Epitope_Rep4 1290.6132185872598 1290.6121299358601 55.019 2 0.12270101177979786 0.0010567632850241545 0.005662767841152125 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 76455 14238 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.52857496793 62.672 1 0.12269842983445252 0.0010567632850241545 0.005663102317935932 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 6343 6471 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 29.696 2 0.1226949378770804 0.0010567632850241545 0.0056635547125118 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 48692 18846 KAYTSQFISL True PC9_epitope_Rep1 1156.6128246644398 1156.61172993586 77.276 2 0.1226936389813581 0.0010567632850241545 0.005663722997752353 ['ENSG00000131459|ENST00000253778|GFPT2'] 111554 9831 TIAPALVSK True PC9_epitope_Rep3 898.5487678559 898.54766993586 42.774 2 0.12269236581237784 0.0010567632850241545 0.005663887954578324 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 137406 5276 YEAPGVREA True H1975_Epitope_Rep2 990.4770594676198 990.47596993586 25.357 2 0.12269082716753248 0.0010567632850241545 0.005664087313784439 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 13983 15300 DRDPEFYKF True PC9_epitope_Rep1 1215.5560380643099 1215.5549499358601 63.672 2 0.12269045082991162 0.0010567632850241545 0.005664136076159656 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 62194 15394 LLEPVLLLGK True H1975_Epitope_Rep1 1093.7110821537299 1093.7099899358602 64.482 2 0.1226871626743298 0.0010567632850241545 0.005664562142657368 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 106730 4891 STVSADPVVK True NCI_RA007_Epitope_Rep4 1001.5393253710099 1001.53822993586 25.263 2 0.12268415366977418 0.0010567632850241545 0.0056649520653221175 ['ENSG00000136051|ENST00000332180|WASHC4'] 109092 16975 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.5744349679301 70.541 1 0.12266784003934145 0.0010567632850241545 0.005667066528716923 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 72988 18102 MQMSPALTC True PC9_epitope_Rep5 980.4129452830399 980.41184993586 74.64 2 0.12265698376890123 0.0010567632850241545 0.00566847407361454 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 68767 15177 LTLGKLEQV True PC9_epitope_Rep4 999.5964463243098 999.59534993586 66.304 2 0.1226479922190528 0.0010567632850241545 0.005669640111398818 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 23742 21605 EYGFYHDFF True PC9_epitope_Rep1 1223.4923751785898 1223.4912699358601 87.927 2 0.12264678826169034 0.0010567632850241545 0.0056697962602254215 ['nc|ENSG00000143374|Q9BW92-2|TARS2', 'ENSG00000143374|ENST00000369064|TARS2'] 99280 9332 SHQTGVVAL True PC9_epitope_Rep3 910.4872302284999 910.48612993586 40.835 2 0.12264553260190444 0.0010567632850241545 0.005669959119148184 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 97741 11105 SEILYSAPP True H1975_Epitope_Rep2 975.49131254943 975.4907649679301 47.75 1 0.1226434867304859 0.0010567632850241545 0.005670224478228392 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 67980 12944 LTDEQLLY True H1975_Epitope_Rep3 993.50187723313 993.50078993586 55.019 2 0.12264326556078342 0.0010567632850241545 0.005670253165699782 ['ENSG00000197081|ENST00000356956|IGF2R'] 74254 5290 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 25.407 2 0.12264077841364407 0.0010567632850241545 0.005670575778264371 ['ENSG00000167658|ENST00000309311|EEF2'] 6158 9600 APM[Oxidation]PPIIHA True PC9_epitope_Rep6 961.50552352537 961.50442993586 47.243 2 0.12263424049562106 0.0010567632850241545 0.005671423909645058 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 26260 8969 FHEPSQEL True PC9_epitope_Rep2 985.4505103666098 985.44940993586 39.855 2 0.12262972975814648 0.0010567632850241545 0.005672009137393714 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 90827 9228 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.54912993586 40.487 2 0.12262571813792722 0.0010567632850241545 0.005672529658792844 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 125039 14260 VIDGHIYAV True PC9_epitope_Rep1 985.52328138405 985.52218993586 59.675 2 0.12262026856340598 0.0010567632850241545 0.005673236834533525 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.G429V|1|0.39|ENSG00000079999|chr19:10491616-10491616|C/A|missense_variant', 'KEAP1|p.G430V|1|0.54|ENSG00000079999|chr19:10491613-10491613|C/A|missense_variant'] 104013 16402 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42866993586 68.089 2 0.12262006641444574 0.0010567632850241545 0.005673263068486572 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 104698 21551 SQVAVAGLLTV True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 87.933 2 0.12261057018288488 0.0010567632850241545 0.005674495579064716 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 111527 20901 TIAEGLTLAQV True PC9_epitope_Rep3 1114.62338934814 1114.6228749679299 85.671 1 0.12260615729845353 0.0010567632850241545 0.005675068414017064 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 72955 13348 MQDKSSYLL True PC9_epitope_Rep3 1083.52704643515 1083.5259499358601 56.376 2 0.12260594007699445 0.0010567632850241545 0.005675096612918097 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9', 'DOCK9|p.D312Efs*18|1|0.3|ENSG00000088387|chr13:98914352-98914352|A/-|frameshift_variant'] 114853 16051 TQNPNYYNL True PC9_epitope_Rep1 1125.5090878718902 1125.50798993586 66.554 2 0.1225980100048021 0.0010567632850241545 0.005676126159954472 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 98006 6573 SEQDPAEHIP True H1975_Epitope_Rep2 1121.4989171110099 1121.4978299358602 30.195 2 0.12259536964095118 0.0010567632850241545 0.005676468994202293 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 38530 11380 HESAEIFVV True H1975_Epitope_Rep3 1029.5131106231697 1029.51200993586 48.884 2 0.12259231810609088 0.0010567632850241545 0.005676865241595868 ['ENSG00000108592|ENST00000427159|FTSJ3', 'FTSJ3|p.A327Efs*42|1|0.3|ENSG00000108592|chr17:63824349-63824349|G/-|frameshift_variant'] 14461 17165 DTEPPPLLVY True H1975_Epitope_Rep2 1142.5859412102598 1142.58537496793 71.305 1 0.12259174559435106 0.0010567632850241545 0.005676939586309249 ['ENSG00000174231|ENST00000304992|PRPF8'] 44194 22805 IIYPGAFVDL True PC9_epitope_Rep2 1106.60119735158 1106.60010993586 93.208 2 0.12258822104166457 0.0010567632850241545 0.005677397295478372 ['ENSG00000012174|ENST00000379484|MBTPS2'] 105702 12423 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 52.871 2 0.12258677454586225 0.0010567632850241545 0.005677585152287444 ['ENSG00000115758|ENST00000234111|ODC1'] 88274 10897 QSEIASM[Oxidation]LY True H1975_Epitope_Rep3 1056.47976227 1056.47917496793 47.0 1 0.12258474773445534 0.0010567632850241545 0.0056778483850748645 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 31671 10117 GEFSITYKP True H1975_Epitope_Rep3 1040.5178616504397 1040.51727496793 43.957 1 0.12258402828454944 0.0010567632850241545 0.005677941826735677 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 137792 7507 YEQGPDTPVSA True H1975_Epitope_Rep3 1162.51423282198 1162.5131299358602 33.857 2 0.12258302543735698 0.0010567632850241545 0.005678072078352102 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 47936 12123 IYIKQIKTF True PC9_epitope_Rep4 1152.6906810623198 1152.6890249037901 54.44 3 0.12258007231634512 0.0010567632850241545 0.005678455652056799 ['ENSG00000103479|ENST00000262133|RBL2'] 348 18985 AAIPIQINV True PC9_epitope_Rep6 937.55966689277 937.55856993586 85.669 2 0.12257927042235485 0.0010567632850241545 0.005678559812493068 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 97533 8791 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 38.821 1 0.12257903285099274 0.0010567632850241545 0.005678590671714926 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 32824 4895 GHLENNPALEK True PC9_epitope_Rep5 1220.6149499227597 1220.61331490379 23.868 3 0.12257503556553767 0.0010567632850241545 0.005679109921859802 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 6383 6440 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 29.745 2 0.12257452617278404 0.0010567632850241545 0.005679176095667711 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 99401 15338 SHVIQDIAL True PC9_epitope_Rep2 994.5447451046199 994.54364993586 64.277 2 0.12257169764415078 0.0010885885885885886 0.005679543555746987 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 85829 14743 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.5132749679299 61.708 1 0.12256734007291714 0.0010885885885885886 0.005680109702475358 ['ENSG00000085872|ENST00000546361|CHERP'] 96645 5921 SAINEVVTR True NCI_RA007_Epitope_Rep3 987.53490869691 987.53380993586 30.269 2 0.1225469609334354 0.0010885885885885886 0.005682758145053838 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 26912 20889 FLDGNEMTL True PC9_epitope_Rep2 1038.46919720586 1038.46867496793 85.793 1 0.12254686855743334 0.0010885885885885886 0.005682770152851445 ['ENSG00000169504|ENST00000374379|CLIC4'] 43803 18292 IHSDVVFVV True PC9_epitope_Rep2 1013.55458151233 1013.55348993586 75.685 2 0.1225448322412076 0.0010885885885885886 0.0056830348563998295 ['ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF', 'ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1'] 27599 14431 FNPFVTSDR True PC9_epitope_Rep2 1081.51925863277 1081.5181699358602 60.777 2 0.12254397587133015 0.0010885885885885886 0.005683146180701834 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 76922 16195 NRDPILVSL True PC9_epitope_Rep6 1025.58694426977 1025.58584993586 74.648 2 0.12254200914119333 0.0010885885885885886 0.005683401855009983 ['ENSG00000106789|ENST00000375077|CORO2A'] 139977 5132 YQDPHSTAV True PC9_epitope_Rep1 1016.45632402304 1016.45522993586 24.592 2 0.12253885036144761 0.0010885885885885886 0.0056838125189489054 ['ENSG00000146648|ENST00000275493|EGFR'] 55345 9614 LAELEEALQK True H1975_Epitope_Rep1 1142.6183039677 1142.61720993586 41.906 2 0.1225342169035179 0.0010885885885885886 0.005684414954112823 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF'] 95945 13075 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.61488490379 55.299 3 0.12253313380517757 0.0010885885885885886 0.00568455578592201 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 28889 16763 FTDESYLELY True H1975_Epitope_Rep1 1278.5655996885 1278.56450993586 69.878 2 0.12252777228912044 0.0010885885885885886 0.005685252976960159 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 139998 20979 YQDPVTLQL True PC9_epitope_Rep1 1075.55497543515 1075.55447496793 85.521 1 0.12251307515654988 0.0010885885885885886 0.0056871645648442016 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 92329 9555 RLMNETTAV True PC9_epitope_Rep1 1033.52262976105 1033.5215299358601 41.611 2 0.12251015504659798 0.0010885885885885886 0.005687544444876861 ['ENSG00000164070|ENST00000296464|HSPA4L', 'HSPA4L|p.K523Qfs*3|1|0.25|ENSG00000164070|chr4:127811623-127811624|-/T|frameshift_variant', 'HSPA4L|p.N522Lfs*5|1|0.25|ENSG00000164070|chr4:127811621-127811622|-/CTCC|frameshift_variant', 'ENSG00000170606|ENST00000304858|HSPA4', 'HSPA4|p.K697Nfs*6|1|0.33|ENSG00000170606|chr5:133101809-133101809|A/-|frameshift_variant'] 108824 12217 SYVNHLYVI True NCI_RA007_Epitope_Rep5 1106.5760452329 1106.57494993586 53.646 2 0.12250753106982284 0.0010885885885885886 0.005687885821822899 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5', 'nc|ENSG00000136237|Q92565-2|RAPGEF5'] 76834 11274 NRAQIQTVI True PC9_epitope_Rep5 1041.59309227937 1041.59198993586 48.358 2 0.12250695265134874 0.0010885885885885886 0.005687961076226548 ['ENSG00000114030|ENST00000344337|KPNA1'] 92175 8001 RLFVGSIPK True NCI_RA007_Epitope_Rep1 1015.6178504752298 1015.61674993586 35.116 2 0.12250095955792997 0.0010885885885885886 0.0056887408573950615 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 93121 10167 RPNSLVGITSA True PC9_epitope_Rep6 1113.61422164677 1113.6131299358601 49.738 2 0.12250012151004784 0.0010885885885885886 0.0056888499069058535 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 35122 5559 GQVVTKTAL True NCI_RA007_Epitope_Rep4 915.5389314481899 915.53782993586 27.983 2 0.12249809432851676 0.0010885885885885886 0.0056891136988035185 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 120364 11536 VEEGFSIQA True H1975_Epitope_Rep1 978.4658260775799 978.46472993586 49.357 2 0.12249289615026844 0.0010885885885885886 0.005689790179000743 ['ENSG00000172409|ENST00000533682|CLP1'] 133945 8271 VYIKHPVSL True PC9_epitope_Rep6 1054.61751612206 1054.61640993586 41.42 2 0.12249085988649991 0.0010885885885885886 0.005690055195618351 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 47874 15897 IYIAGHPAF True PC9_epitope_Rep5 987.51780208079 987.51670993586 66.138 2 0.12248006670588626 0.0010885885885885886 0.0056914601132324605 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 85773 17229 QHDPETSVLVL True PC9_epitope_Rep2 1236.635016661 1236.6339099358602 71.532 2 0.12247948674756957 0.0010885885885885886 0.005691535614363008 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 2440 11726 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.50618993586 50.177 2 0.12247854739342798 0.0010885885885885886 0.005691657905057391 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 99357 16666 SHTDVVPVF True PC9_epitope_Rep3 999.50254593947 999.50144993586 69.242 2 0.1224785451792399 0.0010885885885885886 0.0056916581933165655 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 14127 17560 DSDFFTSYY True H1975_Epitope_Rep2 1143.43967089939 1143.4385699358602 72.854 2 0.1224729327167898 0.0010885885885885886 0.00569238891056986 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant'] 111256 18331 THLEGVLLL True PC9_epitope_Rep6 993.5858816406098 993.58478993586 83.152 2 0.12246895511158959 0.0010885885885885886 0.005692906832363023 ['ENSG00000204839|ENST00000398882|MROH6'] 37103 12328 GVPSTAIREI True PC9_epitope_Rep2 1041.5818588893299 1041.5807699358602 52.732 2 0.12246443262305118 0.0010885885885885886 0.005693495759121213 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 108601 20791 SYPDLLPTF True PC9_epitope_Rep6 1051.52261267771 1051.5215099358602 92.741 2 0.1224606354186561 0.0010885885885885886 0.005693990284075662 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 140265 18158 YRAPELML True PC9_epitope_Rep5 991.5160878286299 991.51498993586 74.854 2 0.1224515020124619 0.0010885885885885886 0.00569517993579881 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 104665 14768 SQTLVSQGL True PC9_epitope_Rep1 931.4974605590301 931.49636993586 61.624 2 0.12244666426411344 0.0010885885885885886 0.005695810164563761 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 38896 10070 HHFEGAQIL True PC9_epitope_Rep4 1050.5246783663797 1050.5235899358602 46.401 2 0.12244546719152223 0.0010885885885885886 0.00569596612152222 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 41119 17228 HTVGELIEV True PC9_epitope_Rep1 995.5287606873098 995.52766993586 71.085 2 0.12244310801189438 0.0010885885885885886 0.005696273492287252 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 97698 7298 SEIDMSVKA True H1975_Epitope_Rep2 978.46919720586 978.46808993586 33.009 2 0.1224403032170484 0.0010885885885885886 0.00569663894209683 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 66094 5338 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6217549037901 25.602 3 0.12243969860582618 0.0010885885885885886 0.005696717722719382 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 141870 15480 YVDPQFLTY True H1975_Epitope_Rep3 1144.54407639828 1144.5429699358601 64.961 2 0.12243743834381145 0.0010885885885885886 0.005697012243478168 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 8057 11360 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.4858499358602 48.673 2 0.12243616566270193 0.0010885885885885886 0.0056971780852341815 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 97840 11993 SELPGAFEA True H1975_Epitope_Rep3 919.4287122928699 919.42816496793 51.291 1 0.1224357181296626 0.0010885885885885886 0.005697236403922919 ['ENSG00000126247|ENST00000246533|CAPNS1'] 74811 11123 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.46637496793 47.774 1 0.12242416158677066 0.0010885885885885886 0.005698742556288924 ['ENSG00000144597|ENST00000396842|EAF1'] 99741 21772 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.61132993586 88.579 2 0.12242148064762759 0.0010885885885885886 0.005699092015990901 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 7600 17911 ASFNDTFVHV True PC9_epitope_Rep2 1135.5298233164701 1135.5287299358602 74.199 2 0.12241480789904553 0.0010885885885885886 0.005699961898010932 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 32224 11221 GEYGKFFVT True NCI_RA007_Epitope_Rep5 1046.50729696674 1046.5061899358602 49.797 2 0.12240932661191621 0.0010885885885885886 0.0057006765542609765 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 111553 9740 TIAPALVSK True PC9_epitope_Rep3 898.5487678559 898.54766993586 42.42 2 0.12239608046014024 0.0010885885885885886 0.0057024039639818405 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 124967 12860 VHTIVNETL True PC9_epitope_Rep5 1024.55530978832 1024.5542099358602 54.475 2 0.1223945828235776 0.0010885885885885886 0.005702599300614585 ['ENSG00000023516|ENST00000025301|AKAP11'] 17280 16026 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 66.793 2 0.12239045754369636 0.0010885885885885886 0.0057031373944295876 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 28913 11681 FTDIDGQVY True H1975_Epitope_Rep1 1056.4763907612798 1056.47587496793 49.92 1 0.12238740173583816 0.0010885885885885886 0.005703536020330051 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 142323 7699 YYEEQHPEL True NCI_RA007_Epitope_Rep4 1206.5193182024198 1206.51822993586 36.28 2 0.12237883985987652 0.0010885885885885886 0.0057046530503508846 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 93031 10899 RPLLKAITA True PC9_epitope_Rep1 981.63350053937 981.63240993586 46.807 2 0.12237616851274419 0.0010885885885885886 0.005705001612973207 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 125284 13891 VILPTVHEV True PC9_epitope_Rep6 1005.5858816406101 1005.58478993586 65.269 2 0.12237319197130928 0.0010885885885885886 0.005705390022487066 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 1987 11982 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47456993586 51.246 2 0.12237044982403107 0.0010885885885885886 0.005705747868750073 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 6731 21280 AQAQEVFFL True PC9_epitope_Rep4 1051.53384606775 1051.53274993586 90.021 2 0.12236876028359249 0.0010885885885885886 0.005705968362270129 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 72341 22915 M[Oxidation]IPLLLAAL True PC9_epitope_Rep4 969.5932759006099 969.5921699358599 96.363 2 0.12236798290288738 0.0010885885885885886 0.005706069817159541 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 105224 13509 SRIDIANTL True PC9_epitope_Rep4 1001.5505587610501 1001.54946993586 59.858 2 0.12236778493723449 0.0010885885885885886 0.005706095653667223 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 31987 5475 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 26.081 2 0.12236064617348336 0.0010885885885885886 0.005707027410565838 ['ENSG00000108344|ENST00000264639|PSMD3'] 118670 10837 TYSTEPNNL True PC9_epitope_Rep5 1037.46655435357 1037.46544993586 46.672 2 0.12235534083061975 0.0010885885885885886 0.005707719964369381 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 106323 6377 STFSTNYR True PC9_epitope_Rep2 974.4457593393399 974.44466993586 29.933 2 0.12233343554044628 0.0010885885885885886 0.005710580328149203 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 28189 19674 FREDMPSIL True PC9_epitope_Rep5 1106.5430308524599 1106.54192993586 80.729 2 0.12232963899809653 0.0010885885885885886 0.005711076218165509 ['ENSG00000125676|ENST00000245838|THOC2'] 93074 12382 RPNDIMAEV True PC9_epitope_Rep4 1043.50697969691 1043.50588993586 55.432 2 0.12232740195855973 0.0010885885885885886 0.005711368431538161 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 29412 16969 FVDRGFYSV True PC9_epitope_Rep1 1088.52909504048 1088.5279899358602 70.095 2 0.12232244582740934 0.0010885885885885886 0.00571201587844688 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 91690 4435 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 23.698 2 0.12232117295835189 0.0010885885885885886 0.005712182171979987 ['ENSG00000100292|ENST00000216117|HMOX1'] 43887 19809 IHVDFPVIL True PC9_epitope_Rep6 1051.60661708519 1051.6055299358602 88.853 2 0.12232045660925044 0.0010885885885885886 0.005712275761240394 ['ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 41032 20354 HTILDLPAV True PC9_epitope_Rep5 977.55458151233 977.55348993586 83.326 2 0.12231897827024776 0.0010885885885885886 0.0057124689073617535 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 40765 18317 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.5589899358602 75.471 2 0.12231416675875295 0.0010885885885885886 0.005713097579248442 ['ENSG00000169813|ENST00000682386|HNRNPF'] 115618 19909 TRVDTILEF True PC9_epitope_Rep2 1092.5815245361598 1092.5804299358601 81.975 2 0.12230514336946528 0.0010885885885885886 0.005714276757375949 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 29662 18248 FVLDHEDGLNL True PC9_epitope_Rep6 1270.61936659686 1270.61826993586 82.831 2 0.1223018261975561 0.0010885885885885886 0.005714710305835503 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 17233 14759 EHAEALLL True PC9_epitope_Rep2 894.4810822188999 894.47998993586 62.035 2 0.12230168367215383 0.0010885885885885886 0.005714728934372576 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 115460 10572 TRMSTVSEL True PC9_epitope_Rep3 1022.5066453437399 1022.5055499358599 45.61 2 0.12229946916367851 0.0010885885885885886 0.005715018385517439 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 39633 20499 HLPDAAALLPV True PC9_epitope_Rep2 1115.63389446219 1115.63278993586 84.28 2 0.12229492823894679 0.0010885885885885886 0.005715611959756928 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 29333 20036 FVDEYDPTI True PC9_epitope_Rep1 1097.49170647225 1097.49117496793 81.896 1 0.12229268568756013 0.0010885885885885886 0.005715905120691277 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 103425 7143 SPPPPPPPP True PC9_epitope_Rep6 881.4647038787699 881.46360993586 36.545 2 0.12228943294284361 0.0010885885885885886 0.005716330366819941 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 17527 14914 EHGDQDYIW True PC9_epitope_Rep4 1161.47270236317 1161.4716099358602 65.308 2 0.12228854391908715 0.0010885885885885886 0.005716446598328438 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 116735 13234 TVDNARIVL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 55.77 2 0.12228733902355701 0.0010885885885885886 0.005716604130794943 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 49564 14848 KFNPVSFTW True NCI_RA007_Epitope_Rep4 1124.5654805492 1124.5643899358602 64.575 2 0.12228220047938616 0.0010885885885885886 0.005717276010601259 ['ENSG00000124702|ENST00000326974|KLHDC3'] 6843 5789 AQFKGTQSL True NCI_RA007_Epitope_Rep5 978.51344497634 978.51234993586 28.954 2 0.122281289168656 0.0010885885885885886 0.0057173951752305064 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 54947 7266 KYQAVTATL True NCI_RA007_Epitope_Rep5 993.5494961318899 993.54838993586 34.624 2 0.12228124945052574 0.0010885885885885886 0.005717400368899868 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 46309 11255 ISQIVSSITAS True H1975_Epitope_Rep1 1104.60265390356 1104.60154993586 48.269 2 0.12227868992965556 0.0010885885885885886 0.005717735069740702 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 111253 20165 THLEGVLLL True PC9_epitope_Rep2 993.5858816406098 993.58478993586 82.977 2 0.12227472233043138 0.0010885885885885886 0.0057182539386296015 ['ENSG00000204839|ENST00000398882|MROH6'] 35620 12769 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56537496793 54.176 1 0.12227141887300887 0.0010885885885885886 0.005718685988489218 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 42836 6381 IEQETPVSA True H1975_Epitope_Rep2 972.4763907612798 972.47528993586 29.469 2 0.12227134626685705 0.0010885885885885886 0.005718695484801188 ['ENST00000395449.7_1_11:47187835-47198404:-|nuORF', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 111410 18655 THSLPVVVI True PC9_epitope_Rep3 963.5753169569099 963.57420993586 76.976 2 0.12226640497841437 0.0010885885885885886 0.0057193418025997785 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 27914 20368 FQEEDFPAL True PC9_epitope_Rep4 1094.4920408254197 1094.49147496793 86.49 1 0.12225966081981106 0.0010885885885885886 0.005720224050122813 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 29072 18284 FTHSQFIVV True PC9_epitope_Rep1 1076.5654805492 1076.5643899358602 75.119 2 0.12225960598622607 0.0010885885885885886 0.005720231223808419 ['ENSG00000136824|ENST00000374793|SMC2'] 76813 4276 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 23.47 2 0.12225663127033864 0.0010885885885885886 0.005720620408641974 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 36905 20408 GVLPNIQAV True PC9_epitope_Rep5 909.5283667644899 909.52726993586 83.538 2 0.12225518142153174 0.0010885885885885886 0.005720810103090966 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 107194 21306 SVINFLDQL True PC9_epitope_Rep6 1047.5600608155898 1047.5589699358602 94.807 2 0.1222543415557251 0.0010885885885885886 0.005720919991764074 ['ENSG00000196976|ENST00000357360|LAGE3'] 104415 15773 SQLEDAIRL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 72.914 2 0.1222538885042511 0.0010885885885885886 0.0057209792702164995 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 115855 7910 TSDYVSQSY True H1975_Epitope_Rep3 1048.43491987212 1048.43382993586 35.4 2 0.12225293892537632 0.0010885885885885886 0.005721103517575742 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 107249 16536 SVKNGFLTI True PC9_epitope_Rep2 977.55458151233 977.55348993586 68.844 2 0.12225159031874018 0.0010885885885885886 0.005721279980136968 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 6709 8043 AQAPDLQRV True PC9_epitope_Rep2 996.5352430500799 996.53414993586 36.297 2 0.1222514053494592 0.0010885885885885886 0.005721304183423575 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 28075 14889 FQTEGKLYL True PC9_epitope_Rep4 1097.5757108797297 1097.57460993586 65.209 2 0.12224403991806236 0.0010885885885885886 0.005722268033753 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 58075 9425 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 41.221 2 0.12223963166525384 0.0010885885885885886 0.005722844979655839 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 13965 7593 DRDPASGTAL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 34.028 2 0.1222299556445901 0.0010885885885885886 0.005724111563082521 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 43879 8348 IHTDSNTVL True PC9_epitope_Rep1 998.50327421546 998.50216993586 36.944 2 0.12221311585826722 0.0010885885885885886 0.005726316531570112 ['ENSG00000133243|ENST00000255608|BTBD2', 'nc|ENSG00000133243|Q9BX70-2|BTBD2', 'ENST00000589685.2_1_19:1986489-1990887:-|nuORF'] 49457 5912 KEYGQTMTV True NCI_RA007_Epitope_Rep3 1055.49574630687 1055.49464993586 30.231 2 0.12220667305849968 0.0010885885885885886 0.005727160358791528 ['nc|ENSG00000117595|O14896-2|IRF6', 'ENSG00000117595|ENST00000367021|IRF6'] 111221 5882 THISSQNSEL True PC9_epitope_Rep3 1114.52546621202 1114.52436993586 27.689 2 0.12220000846027583 0.0010885885885885886 0.005728033363396871 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 124720 17156 VHAELADVL True PC9_epitope_Rep5 965.5181960036099 965.51708993586 71.012 2 0.12219644450165647 0.0010885885885885886 0.0057285002644951845 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'CCT6B|p.I363*|1|0.11|ENSG00000132141|chr17:34939308-34939309|AT/-|frameshift_variant', 'CCT6B|p.E364Rfs*28|1|0.12|ENSG00000132141|chr17:34939306-34939306|C/-|frameshift_variant', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 91039 7716 RFKTQPVTF True NCI_RA007_Epitope_Rep4 1122.6185787512197 1122.61748993586 36.351 2 0.12219377093927895 0.0010885885885885886 0.005728850542494102 ['nc|nan|Q7Z7L8|C11orf96', 'ENSG00000187479|ENST00000617612|C11orf96'] 96351 18232 RYSTGLAGNLL True PC9_epitope_Rep5 1163.6298717109098 1163.6287699358602 75.141 2 0.12219331548233667 0.0010885885885885886 0.005728910216482125 ['ENSG00000168802|ENST00000448552|CHTF8'] 65395 12358 LREGDPVSL True PC9_epitope_Rep5 984.52400966004 984.52290993586 52.53 2 0.12219294595797502 0.0010885885885885886 0.005728958632026467 ['ENSG00000141499|ENST00000396463|WRAP53'] 54538 9001 KYIHSANVL True PC9_epitope_Rep1 1043.57637958607 1043.5752899358602 39.47 2 0.12218606780630203 0.0010885885885885886 0.005729859889117425 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 104294 20185 SQIISLQTL True PC9_epitope_Rep4 1001.5757108797301 1001.57517496793 85.779 1 0.12216328263588552 0.0010885885885885886 0.00573284646329507 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 55055 18433 KYTEITATYF True PC9_epitope_Rep5 1235.6074049308297 1235.60630993586 75.923 2 0.12216071169349277 0.0010885885885885886 0.005733183546036839 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 87568 8974 QQLGKVVQV True PC9_epitope_Rep4 997.5920296502098 997.59092993586 42.071 2 0.12215707572449953 0.0010885885885885886 0.0057336603001946805 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 137727 15974 YENELMLMA True H1975_Epitope_Rep1 1112.48821839828 1112.48767496793 66.767 1 0.12215353824506743 0.0010885885885885886 0.005734124177453179 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 75583 13607 NLDIIQQEY True H1975_Epitope_Rep1 1134.55570371114 1134.55517496793 57.469 1 0.12215219622239008 0.0010885885885885886 0.005734300169366019 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 49009 11021 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 50.444 2 0.12215175953841967 0.0010885885885885886 0.005734357436934804 ['ENSG00000197747|ENST00000368811|S100A10'] 45242 19667 IPTPIVGV True PC9_epitope_Rep2 794.49019035062 794.4896449679301 81.035 1 0.12214738610302635 0.0010885885885885886 0.005734931008447042 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 57770 6020 LEEQKIVQA True H1975_Epitope_Rep2 1056.5815245361598 1056.5804299358601 28.134 2 0.12213588375658836 0.0010885885885885886 0.005736439797092551 ['ENSG00000167842|ENST00000611091|MIS12'] 105316 9701 SRPENAIIY True PC9_epitope_Rep4 1061.5505587610498 1061.54946993586 44.95 2 0.1221302468541075 0.0010885885885885886 0.005737179343997329 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 96668 20165 SAIVNLPGC True PC9_epitope_Rep5 872.4425885351999 872.44148993586 82.613 2 0.12212427456911502 0.0010885885885885886 0.005737962993942519 ['ENSG00000181789|ENST00000314797|COPG1'] 110668 15588 TGAAPIIDVVR True PC9_epitope_Rep1 1110.6397081186199 1110.6386099358601 64.781 2 0.12212190366979886 0.0010885885885885886 0.005738274119160933 ['ENSG00000166441|ENST00000314138|RPL27A'] 74889 4858 NHHLQETSF True PC9_epitope_Rep6 1111.50467119779 1111.50356993586 26.209 2 0.1221218355098815 0.0010885885885885886 0.00573828306380377 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 21652 17769 ERSDTFINL True PC9_epitope_Rep1 1093.54038800017 1093.53928993586 73.145 2 0.12212073081477325 0.0010885885885885886 0.005738428035117836 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 25461 7080 FEELDRPAA True H1975_Epitope_Rep2 1046.50327421546 1046.5021699358601 32.164 2 0.12211951259038482 0.0010885885885885886 0.005738587909255767 ['ENSG00000150990|ENST00000308736|DHX37'] 23771 20647 EYGPVYSTW True PC9_epitope_Rep5 1100.48147614172 1100.4803699358602 84.473 2 0.1221141299651618 0.0010885885885885886 0.005739294352255255 ['ENSG00000148158|ENST00000374232|SNX30'] 57753 12848 LEEPFHITC True H1975_Epitope_Rep2 1087.5008316873102 1087.4997299358602 54.53 2 0.12211106314896425 0.0010885885885885886 0.005739696894780597 ['nc|ENSG00000113597|A5PLN9-2|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-4|TRAPPC13', 'ENSG00000113597|ENST00000399438|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-5|TRAPPC13'] 117101 21310 TVISLLTGL True PC9_epitope_Rep6 915.56408356687 915.5635349679301 94.822 1 0.12211029107758513 0.0010885885885885886 0.00573979823926449 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 65301 11327 LRAPASSCESL True PC9_epitope_Rep1 1132.55465816532 1132.5535699358602 48.448 2 0.12210984055230925 0.0010885885885885886 0.005739857377418075 ['ENST00000336273.7_1_8:98656420-98656720:+|nuORF'] 73746 10058 NADHTTLLL True NCI_RA007_Epitope_Rep5 996.52400966004 996.52290993586 45.327 2 0.12210019144105562 0.0010885885885885886 0.00574112411006284 ['VPS11|p.S379Dfs*2|1|0.05|ENSG00000160695|chr11:119081555-119081556|-/GACTGACC|frameshift_variant', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENSG00000160695|ENST00000621676|VPS11'] 72809 15551 MPFPNIRSA True PC9_epitope_Rep2 1031.5222358382298 1031.52112993586 65.09 2 0.12208076248674253 0.0010885885885885886 0.00574367556729847 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000537136.1_1_12:31255149-31256026:+|nuORF', 'ENST00000435753.6_1_12:31250908-31256767:+|nuORF', 'ENST00000536265.5_1_12:31242773-31256767:+|nuORF'] 100625 22053 SLDDLLTNV True PC9_epitope_Rep2 988.5076908895601 988.50714496793 90.3 1 0.12207474390921962 0.0010885885885885886 0.00574446616637731 ['ENSG00000143819|ENST00000272167|EPHX1'] 71435 16907 LYTEKFEEF True PC9_epitope_Rep4 1204.5652057656796 1204.56467496793 73.017 1 0.122073992954035 0.0010885885885885886 0.005744564819159918 ['ENSG00000084652|ENST00000373610|TXLNA'] 21308 4858 EREPSSSSL True PC9_epitope_Rep5 990.4618033263 990.46070993586 23.727 2 0.12207382067149081 0.0010885885885885886 0.0057445874521055125 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1', 'ENST00000554652.5_1_14:36147090-36221314:-|nuORF', 'ENST00000554704.5_1_14:36176787-36221314:-|nuORF', 'ENST00000443361.1_1_9:108283251-108284913:+|nuORF', 'ENST00000557104.1_1_14:36217742-36219705:-|nuORF'] 142903 21348 YYVGGEIVTI True PC9_epitope_Rep1 1112.57537652656 1112.5748749679299 86.946 1 0.12207269334399756 0.0010885885885885886 0.005744735552499176 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 77561 9191 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46578993586 40.306 2 0.12207254973731725 0.0010885885885885886 0.005744754418807565 ['ENSG00000204019|ENST00000371894|CT83'] 17802 17599 EHSLVIDTL True PC9_epitope_Rep5 1025.53932537101 1025.5387749679298 72.703 1 0.12206156583666682 0.0010885885885885886 0.005746197606846879 ['ENSG00000143256|ENST00000368010|PFDN2'] 26232 8889 FHDSAVTSV True PC9_epitope_Rep1 961.45051036661 961.44940993586 39.031 2 0.12205048231917301 0.0010885885885885886 0.005747654243048113 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 109606 9019 TEAEDMISA True H1975_Epitope_Rep2 965.4011772156899 965.4006249679301 39.643 1 0.12203996633736054 0.0010885885885885886 0.005749036625472258 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 6521 6093 APTGDLPRA True PC9_epitope_Rep4 896.4715801643599 896.47048993586 30.445 2 0.12203807358829095 0.0010885885885885886 0.005749285472051368 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 142154 9637 YVSGELEHV True PC9_epitope_Rep4 1031.4923751785898 1031.4912699358601 44.693 2 0.12202910869499764 0.0010885885885885886 0.005750464262161443 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 104275 16597 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.57494993586 69.083 2 0.12202339000956858 0.0010885885885885886 0.005751216333207269 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 73309 8792 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46340993586 38.748 2 0.12202303367699267 0.0010885885885885886 0.005751263198106568 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 75275 6898 NIILEEGK True H1975_Epitope_Rep3 914.5072969667399 914.50618993586 31.492 2 0.12201807102430247 0.0010885885885885886 0.005751915925548625 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 23843 22489 EYINFLENL True PC9_epitope_Rep4 1153.5655401188499 1153.56444993586 94.735 2 0.12201592599276667 0.0010885885885885886 0.005752198079531308 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 85739 10337 QHDDQQPVVL True PC9_epitope_Rep5 1177.5727507576098 1177.57164993586 44.745 2 0.12201590336720654 0.0010885885885885886 0.005752201055733068 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 48656 11993 KASDLYITL True NCI_RA007_Epitope_Rep3 1022.56481184286 1022.56370993586 54.301 2 0.12201215145501308 0.0010885885885885886 0.005752694608991945 ['ENSG00000143418|ENST00000368954|CERS2'] 32000 5804 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 27.348 2 0.12200499988718533 0.0010885885885885886 0.005753635491870427 ['ENSG00000108344|ENST00000264639|PSMD3'] 120366 11597 VEEGFSIQA True H1975_Epitope_Rep2 978.4658260775799 978.46472993586 49.674 2 0.1219929402203978 0.0010885885885885886 0.005755222440608076 ['ENSG00000172409|ENST00000533682|CLP1'] 76875 11423 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 48.817 2 0.12199076570447237 0.0010885885885885886 0.00575550863380015 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 115818 8499 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 37.646 1 0.12198959133891185 0.0010885885885885886 0.005755663200620746 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 88149 19908 QRTFVLEVM True PC9_epitope_Rep5 1121.5903153980498 1121.58920993586 81.63 2 0.12198423581671287 0.0010885885885885886 0.005756368131439987 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP', 'ENST00000466134.5_1_21:45719988-45734072:+|nuORF', 'nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF'] 49212 6648 KENEGFTVTA True H1975_Epitope_Rep2 1094.52440358286 1094.5233099358602 30.479 2 0.12198354623701446 0.0010885885885885886 0.005756458904817312 ['ENSG00000125730|ENST00000245907|C3'] 31709 8019 GEGGSFVDA True H1975_Epitope_Rep3 837.3504619721699 837.3499149679301 35.818 1 0.12198262016328466 0.0010885885885885886 0.005756580811478434 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 28148 20792 FRDFIPVVL True PC9_epitope_Rep4 1104.6331661861998 1104.63206993586 88.125 2 0.12198064190342307 0.0010885885885885886 0.005756841234464186 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 109760 9138 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.48110993586 40.101 2 0.12197958796725007 0.0010885885885885886 0.005756979981913563 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 90319 5904 REFDNMAKV True NCI_RA007_Epitope_Rep3 1108.5335287979199 1108.5324299358601 30.199 2 0.1219772935862785 0.0011151587242584195 0.005757282041405751 ['ENSG00000133142|ENST00000472484|TCEAL4', 'nc|ENSG00000133142|Q96EI5-2|TCEAL4'] 17367 16392 EHDGSLFQAV True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 68.19 2 0.12197643185131965 0.0011151587242584195 0.005757395494407853 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 8223 8563 ATGDMSGLLK True NCI_RA007_Epitope_Rep3 991.5008316873099 991.49972993586 40.757 2 0.12197491448757518 0.0011151587242584195 0.005757595270510065 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 88848 21425 QVAVAGLLTV True PC9_epitope_Rep2 969.58588164061 969.5853349679301 87.884 1 0.12197417648146901 0.0011151587242584195 0.0057576924388400685 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 61954 11454 LLDLPGGKY True H1975_Epitope_Rep2 974.54368247546 974.54258993586 49.112 2 0.12197275156877743 0.0011151587242584195 0.005757880052104686 ['ENST00000557644.5_1_12:97330441-97330501:+|nuORF'] 71494 17064 LYYDAIWHF True NCI_RA007_Epitope_Rep3 1226.5760452328998 1226.57494993586 74.986 2 0.12197181036658006 0.0011151587242584195 0.005758003980180639 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 40283 9022 HQLSQLQAL True NCI_RA007_Epitope_Rep5 1036.5665431783598 1036.5654499358602 41.361 2 0.12196270727159338 0.0011151587242584195 0.005759202719140283 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 140138 10409 YQRADFVL True NCI_RA007_Epitope_Rep3 1010.5185303567798 1010.51742993586 48.013 2 0.12196244375938749 0.0011151587242584195 0.005759237423318223 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 9630 11106 AYAPPPHVI True PC9_epitope_Rep2 963.5178020807899 963.51670993586 48.043 2 0.12196000131731266 0.0011151587242584195 0.005759559099152859 ['ENSG00000128335|ENST00000358502|APOL2'] 37957 9052 HADPTELAL True NCI_RA007_Epitope_Rep3 965.4818104948899 965.48070993586 42.698 2 0.12195342662784316 0.0011151587242584195 0.005760425089780654 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 8013 15342 ATDLDVANFY True H1975_Epitope_Rep1 1127.51350454599 1127.51297496793 64.281 1 0.12194566807412786 0.0011151587242584195 0.005761447177833835 ['ENSG00000142252|ENST00000270257|GEMIN7'] 31475 8044 GEAPVPASV True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 35.892 1 0.12194389592009904 0.0011151587242584195 0.005761680660843035 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 27439 24396 FLYPFPLAL True PC9_epitope_Rep5 1079.60555445603 1079.60497496793 98.874 1 0.1219373295606301 0.0011151587242584195 0.0057625458657154915 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 23890 12166 EYISTVKTL True PC9_epitope_Rep4 1052.57537652656 1052.57426993586 54.613 2 0.12193259662547151 0.0011151587242584195 0.00576316957142365 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 40484 11632 HRDLPIKL True PC9_epitope_Rep1 990.5974493838199 990.59634993586 49.622 2 0.12193159197810116 0.0011151587242584195 0.005763301972243218 ['ENSG00000136628|ENST00000366923|EPRS1'] 38601 14179 HEYPWILSA True NCI_RA007_Epitope_Rep4 1114.54474510462 1114.54364993586 61.82 2 0.12193103545505982 0.0011151587242584195 0.005763375316776842 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 14732 9210 DVNAAIATIK True H1975_Epitope_Rep1 1014.57095985246 1014.56986993586 40.335 2 0.12192451002731643 0.0011151587242584195 0.005764235375236001 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 111597 6531 TIDDLEEK True PC9_epitope_Rep2 961.46040634397 961.45930993586 30.537 2 0.12191778086847367 0.0011151587242584195 0.005765122417108248 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 2160 5901 AELQSRLAA True H1975_Epitope_Rep3 957.5243440132099 957.52324993586 27.708 2 0.12191068903382563 0.0011151587242584195 0.005766057411585578 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 47403 21570 IVLDRLIEL True PC9_epitope_Rep1 1082.66994561774 1082.6688499358602 87.79 2 0.12191017833613935 0.0011151587242584195 0.005766124748195182 ['ENSG00000129083|ENST00000439561|COPB1'] 134708 20825 VYTPTDTLVF True PC9_epitope_Rep4 1154.5859412102598 1154.5848499358601 88.254 2 0.12190934357367594 0.0011151587242584195 0.005766234815111686 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 26979 15853 FLEEVTEYY True H1975_Epitope_Rep2 1191.53357128423 1191.53246993586 66.174 2 0.12190855295849086 0.0011151587242584195 0.005766339062919442 ['ENSG00000158615|ENST00000367188|PPP1R15B'] 9115 21837 AVITGFFTV True PC9_epitope_Rep4 953.5222187548899 953.52167496793 92.199 1 0.12190002498402455 0.0011151587242584195 0.005767463649545057 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 24229 5892 EYSKQMQRF True PC9_epitope_Rep2 1215.57064258263 1215.56954993586 28.056 2 0.12189973004631822 0.0011151587242584195 0.005767502546907788 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 100933 19089 SLFGGSVKL True PC9_epitope_Rep5 906.51746772762 906.51636993586 78.456 2 0.12189547985926479 0.0011151587242584195 0.005768063104151936 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000477798.5_1_3:33840175-33866683:+|nuORF'] 99259 9533 SHQGDYAVL True PC9_epitope_Rep2 988.4614094034798 988.46030993586 42.015 2 0.1218949658612456 0.0011151587242584195 0.005768130898970197 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT', 'AASDHPPT|p.Y174Ifs*11|1|0.09|ENSG00000149313|chr11:106090664-106090664|T/-|frameshift_variant'] 27804 18041 FQDDNNLYL True PC9_epitope_Rep6 1140.50875351872 1140.5076499358602 82.027 2 0.12189342307897869 0.0011151587242584195 0.005768334392066354 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 21875 13164 ESDFSNPLY True H1975_Epitope_Rep1 1070.4556553167 1070.45507496793 55.731 1 0.12189090016569848 0.0011151587242584195 0.005768667179641484 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 65392 12426 LREGDPVSL True PC9_epitope_Rep1 984.52400966004 984.52290993586 52.66 2 0.12188791810276733 0.0011151587242584195 0.00576906055605036 ['ENSG00000141499|ENST00000396463|WRAP53'] 71686 5136 MEDANVRVA True H1975_Epitope_Rep2 1003.4756795686299 1003.47458993586 24.833 2 0.12188447995859315 0.0011151587242584195 0.005769514128598417 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 139968 21392 YQDEVFGGF True PC9_epitope_Rep5 1060.4501760134397 1060.44906993586 87.346 2 0.12188229526506208 0.0011151587242584195 0.005769802359472362 ['ENSG00000145907|ENST00000356245|G3BP1'] 25629 10553 FENPIIKSC True H1975_Epitope_Rep2 1049.52156713189 1049.52046993586 45.612 2 0.12187679461454283 0.0011151587242584195 0.005770528133363932 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 114072 12057 TPFEKGLHVV True PC9_epitope_Rep2 1125.61824439805 1125.6166049037902 51.691 3 0.12187663824130197 0.0011151587242584195 0.005770548767067603 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 624 13561 AASGHFICV True PC9_epitope_Rep5 903.4272728242299 903.42616993586 57.185 2 0.1218632939803402 0.0011151587242584195 0.005772309829790478 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74649977-74650720:+|nuORF'] 58903 11456 LETEVPVVA True H1975_Epitope_Rep1 955.5226126777098 955.5220649679301 49.046 1 0.12186137215738954 0.0011151587242584195 0.00577256349901791 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 11735 11955 DHASIQMNV True PC9_epitope_Rep1 1013.46002950449 1013.4589299358599 50.852 2 0.12185678127965721 0.0011151587242584195 0.00577316951175929 ['ENSG00000171858|ENST00000343986|RPS21'] 6909 13009 AQIGSYVHV True PC9_epitope_Rep2 972.50288029264 972.50178993586 55.323 2 0.1218538152214516 0.0011151587242584195 0.005773561075424743 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 117331 5590 TVNSPAIYK True NCI_RA007_Epitope_Rep4 991.53384606775 991.53274993586 28.102 2 0.1218475934203076 0.0011151587242584195 0.005774382529800683 ['ENST00000488453.1_1_1:38483328-38489297:+|nuORF', 'ENSG00000183520|ENST00000373014|UTP11'] 17817 18685 EHSTVITFL True PC9_epitope_Rep4 1045.54441075145 1045.5433099358602 79.953 2 0.12184655627298449 0.0011151587242584195 0.00577451947380152 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 77606 6554 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 30.175 2 0.12184348520422045 0.0011151587242584195 0.005774924993584674 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 99164 11515 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 55.376 2 0.12183385112994766 0.0011151587242584195 0.005776197307202042 ['ENSG00000132646|ENST00000379143|PCNA'] 73493 23206 MVDGTLLLL True PC9_epitope_Rep5 973.5518046310099 973.55070993586 94.243 2 0.12183036539387004 0.0011151587242584195 0.0057766577146895716 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 95782 19639 RYIDRIHIFF True PC9_epitope_Rep2 1378.7509899031 1378.74934490379 80.926 3 0.12182721257883723 0.0011151587242584195 0.005777074179773648 ['ENSG00000174231|ENST00000304992|PRPF8'] 130968 15096 VTDLLKELV True H1975_Epitope_Rep2 1028.61176203528 1028.6106699358602 63.22 2 0.1218096217418655 0.0011151587242584195 0.005779398346671023 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2', 'ENST00000498819.1_1_9:91963122-91972225:+|nuORF'] 92729 4995 RNVSTGDVNVE True PC9_epitope_Rep6 1188.5734790335998 1188.5723899358602 26.819 2 0.12179358504283042 0.0011151587242584195 0.005781517971653294 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 125040 14167 VIDGHIYAV True PC9_epitope_Rep5 985.52328138405 985.52218993586 59.504 2 0.12178080029214619 0.0011151587242584195 0.0057832083200374425 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.G429V|1|0.39|ENSG00000079999|chr19:10491616-10491616|C/A|missense_variant', 'KEAP1|p.G430V|1|0.54|ENSG00000079999|chr19:10491613-10491613|C/A|missense_variant'] 95672 10926 RYFDPANGKF True PC9_epitope_Rep6 1213.5880068989297 1213.5869099358601 52.896 2 0.121766719457226 0.0011151587242584195 0.0057850705906044705 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 114318 22747 TPQSIFIFA True PC9_epitope_Rep3 1022.5436824754598 1022.5425899358601 92.763 2 0.12176541182030776 0.0011151587242584195 0.0057852435627779916 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 32105 12137 GETEVGFVP True H1975_Epitope_Rep2 933.4443623570098 933.44381496793 51.769 1 0.12176261505105111 0.0011151587242584195 0.005785613532028476 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 31750 8447 GEHGLIIRV True NCI_RA007_Epitope_Rep4 992.57671393924 992.57560993586 39.307 2 0.12176238236419384 0.0011151587242584195 0.005785644313937619 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 88821 5980 QTYVGITEK True NCI_RA007_Epitope_Rep5 1037.5393253710097 1037.53822993586 29.685 2 0.12175269972073066 0.0011151587242584195 0.005786925363019438 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 12020 13146 DHSGQVTIL True PC9_epitope_Rep3 968.49270953176 968.49160993586 55.597 2 0.12174257686950897 0.0011151587242584195 0.005788264949698898 ['ENSG00000139668|ENST00000298125|WDFY2'] 26862 14675 FLDDSTALY True H1975_Epitope_Rep3 1043.48114178855 1043.48004993586 61.817 2 0.12173923581603414 0.0011151587242584195 0.005788707147670758 ['ENSG00000100558|ENST00000216446|PLEK2'] 27649 20327 FPFAPPAAA True PC9_epitope_Rep3 887.4541391950698 887.45359496793 83.437 1 0.12173675483308906 0.0011151587242584195 0.005789035534218797 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 107384 20010 SVLKSLVEI True PC9_epitope_Rep3 986.6011973515799 986.60010993586 82.216 2 0.12173214503240612 0.0011151587242584195 0.005789645742568621 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 92715 4891 RNVSTGDVNV True NCI_RA007_Epitope_Rep3 1059.53088594563 1059.5297899358602 26.227 2 0.12172315021484617 0.0011151587242584195 0.005790836585254199 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 987 4855 AEAAAEAAATA True H1975_Epitope_Rep3 945.44033960573 945.43924993586 23.801 2 0.1217229041321985 0.0011151587242584195 0.005790869168014904 ['ENST00000242719.3_1_1:51701983-51702103:+|nuORF'] 134469 20789 VYPQYVIEY True PC9_epitope_Rep1 1172.57537652656 1172.5748749679299 84.794 1 0.12171888627215761 0.0011151587242584195 0.005791401181191846 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 49180 5782 KEMEKSFEV True H1975_Epitope_Rep2 1125.5376111188498 1125.53596490379 27.234 3 0.12171868025774517 0.0011151587242584195 0.005791428461275049 ['ENSG00000091527|ENST00000264993|CDV3'] 118424 14802 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47054993586 61.935 2 0.12170255891794145 0.0011151587242584195 0.005793563611668518 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 88620 14923 QTEDNMLFY True H1975_Epitope_Rep2 1159.4855755459898 1159.48446993586 62.555 2 0.12169956857991417 0.0011151587242584195 0.005793959744085336 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 69552 13625 LVDDPLEY True H1975_Epitope_Rep3 962.4596780679799 962.45912496793 57.697 1 0.1216956019860725 0.0011151587242584195 0.005794485242729929 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 114390 14749 TPSPLPTV True PC9_epitope_Rep4 810.4487194614601 810.44762993586 64.665 2 0.12169421374238483 0.0011151587242584195 0.005794669169762839 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 89629 12319 QYSDINNRW True PC9_epitope_Rep5 1194.5417849825 1194.5406899358602 52.376 2 0.12168869198932487 0.0011151587242584195 0.005795400797862791 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 61813 20504 LLASEVPQL True PC9_epitope_Rep3 968.5542471591598 968.55314993586 84.129 2 0.12167690508038614 0.0011151587242584195 0.005796962856512036 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2578584-2579570:-|nuORF', 'ENST00000469750.5_1_7:2577705-2579570:-|nuORF'] 5217 7319 ALPDQGIAKA True PC9_epitope_Rep6 982.5447451046199 982.54364993586 37.322 2 0.12167497021816366 0.0011151587242584195 0.005797219313213009 ['ENSG00000089289|ENST00000356413|IGBP1'] 115005 8097 TRAGPGTLSV True PC9_epitope_Rep2 957.52434401321 957.52324993586 36.503 2 0.12166749624862164 0.0011151587242584195 0.005798210056175648 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 97953 10394 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.4652749679301 45.037 1 0.12166460261123574 0.0011151587242584195 0.005798593678699406 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 112026 5740 TISETIER True NCI_RA007_Epitope_Rep2 947.4923751785899 947.49126993586 26.944 2 0.12166446201474279 0.0011151587242584195 0.0057986123188409336 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 26296 13860 FHGPPEPVL True PC9_epitope_Rep4 991.5127167003499 991.51160993586 61.214 2 0.12166349536399991 0.0011151587242584195 0.005798740478009357 ['ENSG00000101310|ENST00000650089|SEC23B'] 33370 12413 GKVQIPIM[Oxidation]L True NCI_RA007_Epitope_Rep5 1013.5943385297699 1013.59324993586 54.403 2 0.12165605824852913 0.0011151587242584195 0.005799726588102486 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 107925 12121 SVVTGGVQSV True PC9_epitope_Rep5 931.49746055903 931.49636993586 51.612 2 0.12165519991099598 0.0011151587242584195 0.005799840408276156 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 13276 18200 DLTDYLMK True PC9_epitope_Rep6 997.47903361357 997.47792993586 82.647 2 0.1216533768587448 0.0011151587242584195 0.005800082162054575 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 8043 6847 ATDPNILGR True NCI_RA007_Epitope_Rep4 955.50869394907 955.50758993586 32.958 2 0.12164745327932416 0.0011151587242584195 0.0058008677520924095 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 8236 8141 ATGENLPRV True PC9_epitope_Rep4 955.5086939490699 955.50758993586 38.769 2 0.12164449987569387 0.0011151587242584195 0.005801259473800084 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 119870 7999 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep2 964.4688036634799 964.46770993586 35.744 2 0.12163788964702038 0.0011151587242584195 0.005802136308511757 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 138155 19515 YGLPVVVKL True PC9_epitope_Rep4 986.6164534929 986.61534993586 83.183 2 0.12163733354171978 0.0011151587242584195 0.00580221008076782 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 77598 6609 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 30.332 2 0.12163628151245563 0.0011151587242584195 0.005802349644204699 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 77377 9205 NSEPETLEY True H1975_Epitope_Rep1 1080.46113461996 1080.46057496793 40.314 1 0.12163315189438927 0.0011151587242584195 0.005802764842412301 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 96930 11253 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 51.058 2 0.12161775115334417 0.0011151587242584195 0.00580480844141626 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 5418 11572 ALTGHLEEV True PC9_epitope_Rep5 967.49746055903 967.49636993586 49.506 2 0.12161588045102063 0.0011151587242584195 0.0058050567218919085 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 103522 14986 SPRPPLISV True PC9_epitope_Rep1 964.57056592964 964.56946993586 62.464 2 0.12161467143945126 0.0011151587242584195 0.0058052171879876616 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 142339 11257 YYEEQHPEL True PC9_epitope_Rep5 1206.5193182024198 1206.51822993586 48.29 2 0.12161233454996265 0.0011151587242584195 0.005805527364003418 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 2559 5964 AEQQTVAAV True H1975_Epitope_Rep2 915.4661604307498 915.46506993586 27.922 2 0.12161061081794415 0.0011151587242584195 0.005805756165833254 ['ENSG00000084774|ENST00000264705|CAD'] 120006 7047 [Acetylation]-VDREQLVQK True NCI_RA007_Epitope_Rep1 1155.62478664677 1155.62368993586 31.406 2 0.12160950477503266 0.0011151587242584195 0.005805902982532016 ['ENSG00000170027|ENST00000307630|YWHAG'] 95261 8795 RVNKAFVNV True PC9_epitope_Rep5 1045.6032630402499 1045.60216993586 38.772 2 0.12160455459101897 0.0011151587242584195 0.005806560116947412 ['ENSG00000176731|ENST00000619594|RBIS'] 43308 8360 IFVGGIKEN True NCI_RA007_Epitope_Rep4 975.5389314481899 975.53782993586 38.97 2 0.12160176871476423 0.0011151587242584195 0.005806929972577759 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 90369 12526 REGWFSVTP True H1975_Epitope_Rep2 1077.5243440132099 1077.5232499358601 53.276 2 0.12159791033995068 0.0011151587242584195 0.005807442252189265 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 73449 11410 M[Oxidation]VAPAVASV True PC9_epitope_Rep4 859.4473399429099 859.44679496793 51.659 1 0.1215921364544901 0.0011151587242584195 0.005808208938250085 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 28934 10204 FTDPGQVAY True H1975_Epitope_Rep1 996.4552613938799 996.45416993586 44.19 2 0.12159151730841525 0.0011151587242584195 0.005808291157507877 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 121839 10836 VFPEKGYSF True NCI_RA007_Epitope_Rep4 1072.5229470308798 1072.52184993586 48.532 2 0.12158283338782733 0.0011151587242584195 0.005809444455190131 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 26324 9578 FHNTEVEAM True PC9_epitope_Rep1 1076.45969515132 1076.4585899358601 41.699 2 0.1215788937699172 0.0011151587242584195 0.00580996774338754 ['ENSG00000198730|ENST00000361367|CTR9'] 94714 8929 RSDTPLIY True H1975_Epitope_Rep2 963.5025459394699 963.50144993586 39.307 2 0.12157658162640961 0.0011151587242584195 0.005810274880262539 ['ENSG00000196305|ENST00000443024|IARS1'] 26903 14661 FLDGNEMTL True NCI_RA007_Epitope_Rep3 1038.46919720586 1038.46808993586 65.045 2 0.12157408426339197 0.0011151587242584195 0.005810606638863772 ['ENSG00000169504|ENST00000374379|CLIC4'] 58070 9018 LEIPPPKPP True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 39.594 2 0.121570762624548 0.0011151587242584195 0.005811047925895097 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 17847 6918 EHVASSPAL True PC9_epitope_Rep5 909.4555957470499 909.45448993586 31.579 2 0.12156268048166194 0.0011151587242584195 0.00581212179319719 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 41563 20609 HYTYILEVF True PC9_epitope_Rep4 1183.5913609438696 1183.59026993586 87.426 2 0.12156137696056993 0.0011151587242584195 0.005812295009076757 ['ENSG00000151012|ENST00000280612|SLC7A11'] 32611 6948 GGIGTVPVGR True NCI_RA007_Epitope_Rep2 911.5188647099499 911.51776993586 31.646 2 0.12155633952116345 0.0011151587242584195 0.005812964446901211 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 121711 15945 VFLENVIR True PC9_epitope_Rep6 988.5705659296399 988.56946993586 73.629 2 0.12155248078764606 0.0011151587242584195 0.005813477294551302 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 74854 18934 NHFPGSFQI True PC9_epitope_Rep3 1045.49812926537 1045.4970299358602 78.054 2 0.12155229216632736 0.0011151587242584195 0.00581350236453201 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 141800 20614 YVDDFGVSV True PC9_epitope_Rep3 999.4549270407099 999.4543749679301 84.56 1 0.12155092398084777 0.0011151587242584195 0.0058136842155575765 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 96851 5166 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 26.561 2 0.12153430835439036 0.0011151587242584195 0.005815893109017173 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 108043 22844 SYADQMFLL True PC9_epitope_Rep2 1086.50558271458 1086.5050749679299 93.36 1 0.12153362374118624 0.0011151587242584195 0.005815984139588609 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 115304 8545 TRHPENWTL True PC9_epitope_Rep2 1152.56760580752 1152.56596490379 38.23 3 0.12153205106791748 0.0011151587242584195 0.005816193257607793 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 97400 7722 SEDVPYTA True H1975_Epitope_Rep2 880.38142774728 880.38087496793 34.655 1 0.12153107950235563 0.0011151587242584195 0.005816322450139799 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 77905 19875 NVIESFTEL True PC9_epitope_Rep6 1050.5233409537 1050.5222499358601 89.105 2 0.12152996313436266 0.0011151587242584195 0.00581647090102986 ['nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'ENSG00000197562|ENST00000248139|RAB40C'] 108920 10862 TADHNLLLY True H1975_Epitope_Rep1 1058.53965972418 1058.53907496793 46.74 1 0.1215278881351181 0.0011151587242584195 0.005816746837343787 ['ENSG00000183751|ENST00000568546|TBL3'] 108806 5186 SYTSHTNEI True NCI_RA007_Epitope_Rep2 1050.4618033263002 1050.4607099358602 24.792 2 0.12152704680490528 0.0011151587242584195 0.005816858722262875 ['ENSG00000112936|ENST00000313164|C7'] 4919 21545 ALFVRLLALA True PC9_epitope_Rep4 1085.6961007959299 1085.69500993586 91.053 2 0.12152343518112456 0.0011151587242584195 0.005817339040613434 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF', 'TGFBI|p.Y82Sfs*47|1|0.21|ENSG00000120708|chr5:136044069-136044069|A/-|frameshift_variant'] 10171 17673 AYVPGFAHI True PC9_epitope_Rep2 973.5021520166499 973.50104993586 73.258 2 0.12151688159302892 0.0011151587242584195 0.005818210716724004 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF'] 48655 11905 KASDLYITL True NCI_RA007_Epitope_Rep3 1022.56481184286 1022.56370993586 53.963 2 0.12151573305107051 0.0011151587242584195 0.005818363494520274 ['ENSG00000143418|ENST00000368954|CERS2'] 84847 10476 QEALSALTA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 45.251 1 0.1215153298497305 0.0011151587242584195 0.005818417128851824 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 33589 18952 GLFIIDDK True PC9_epitope_Rep1 919.5014833103099 919.50038993586 77.682 2 0.12151322883124209 0.0011151587242584195 0.00581869661670084 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 136977 21409 YAIEVDPVL True PC9_epitope_Rep5 1017.5382627418498 1017.53767496793 87.414 1 0.12151216591308973 0.0011151587242584195 0.005818838016318076 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 16588 9296 EENFAVEA True H1975_Epitope_Rep1 907.3923267841499 907.39177496793 40.665 1 0.12150155530186647 0.0011151587242584195 0.005820249726209004 ['ENSG00000026025|ENST00000544301|VIM'] 27836 19024 FQDGDTIVNV True PC9_epitope_Rep1 1106.52440358286 1106.5233099358602 77.966 2 0.12149102715787156 0.0011151587242584195 0.005821650794950974 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 8966 19820 AVGGLGSIIRV True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 81.47 2 0.12148786668139948 0.0011151587242584195 0.005822071450487708 ['ENSG00000136950|ENST00000353214|ARPC5L'] 87980 13767 QRM[Oxidation]TTQLLL True PC9_epitope_Rep5 1118.6117794990598 1118.6106899358601 57.977 2 0.12147311171532028 0.0011151587242584195 0.005824035711491884 ['ENSG00000110195|ENST00000393676|FOLR1'] 105167 15856 SRFPTNVDL True PC9_epitope_Rep3 1047.53490869691 1047.53380993586 66.141 2 0.12147111724475997 0.0011151587242584195 0.005824301275906052 ['nc|ENSG00000155393|Q7Z4Q2-3|HEATR3', 'nc|ENSG00000155393|Q7Z4Q2-2|HEATR3', 'ENSG00000155393|ENST00000299192|HEATR3'] 76495 20408 NQIEELPSL True PC9_epitope_Rep3 1041.5342399905699 1041.5331499358601 83.752 2 0.12146976569584536 0.0011151587242584195 0.0058244812418182116 ['LGR6|p.E637Rfs*4|1|0.12|ENSG00000133067|chr1:202318210-202318210|G/-|frameshift_variant', 'nc|ENSG00000133067|Q9HBX8-1|LGR6', 'LGR6|p.P889Lfs*11|1|0.17|ENSG00000133067|chr1:202318963-202318963|G/-|frameshift_variant', 'nc|ENSG00000133067|Q9HBX8-2|LGR6', 'ENSG00000133067|ENST00000367278|LGR6'] 84395 14336 QAALEFHGV True PC9_epitope_Rep5 970.4872302284999 970.48612993586 60.145 2 0.1214681401419699 0.0011151587242584195 0.005824697700144959 ['ENSG00000187231|ENST00000428443|SESTD1'] 110840 21524 TGPTRFFLF True PC9_epitope_Rep5 1084.5705659296398 1084.56946993586 87.828 2 0.12146611670032167 0.0011151587242584195 0.00582496715208773 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 40290 15918 HQLTEVGTMNI True PC9_epitope_Rep5 1241.60742201417 1241.60632993586 66.22 2 0.12146307967801559 0.0011151587242584195 0.0058253716005327565 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 53773 6679 KSYLMNRL True NCI_RA007_Epitope_Rep3 1023.5535359665099 1023.55242993586 33.354 2 0.12146177966513619 0.0011151587242584195 0.005825544735140293 ['ENSG00000162654|ENST00000355754|GBP4'] 120249 4346 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 21.834 2 0.12145384740775733 0.0011151587242584195 0.005826601255389686 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 21206 9469 ERDPATYNI True PC9_epitope_Rep2 1077.5090878718902 1077.50798993586 41.76 2 0.1214460144433153 0.0011151587242584195 0.005827644734299658 ['ENSG00000138246|ENST00000260818|DNAJC13'] 110101 3495 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 18.293 2 0.1214448364343488 0.0011151587242584195 0.005827801680149974 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 106053 5620 STAAVGVLK True NCI_RA007_Epitope_Rep4 844.50181766348 844.50072993586 28.218 2 0.12144235821131896 0.0011151587242584195 0.005828131866693186 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF'] 101334 20030 SLIRNLEQL True PC9_epitope_Rep5 1084.62405805448 1084.62296993586 82.097 2 0.12144105353666357 0.0011151587242584195 0.005828305702629556 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 97602 11058 SEEVTPIAV True H1975_Epitope_Rep1 943.4862271689899 943.48512993586 47.496 2 0.12144045115773443 0.0011151587242584195 0.005828385965809188 ['ENSG00000205339|ENST00000379719|IPO7'] 92288 23500 RLLDVLAPLVL True PC9_epitope_Rep1 1220.7856440763198 1220.78454993586 95.179 2 0.12143939939785137 0.0011151587242584195 0.00582852610874644 ['ENSG00000182871|ENST00000651438|COL18A1'] 31447 8949 GEALPHVVP True H1975_Epitope_Rep1 917.49706663621 917.49596993586 39.326 2 0.12143598374195842 0.0011151587242584195 0.005828981254401469 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 41876 4255 IC[Carbamidomethyl]DNQDTISSK True NCI_RA007_Epitope_Rep2 1279.5714307076998 1279.5703299358602 21.189 2 0.12143529350807036 0.0011151587242584195 0.005829073234207329 ['CON__P02769'] 90363 13475 REGDLLFTVA True NCI_RA007_Epitope_Rep5 1119.5924235730301 1119.5913299358601 58.516 2 0.12142845509796402 0.0011151587242584195 0.005829984589838652 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 29316 15517 FVDEHTINI True PC9_epitope_Rep2 1086.53457434374 1086.53346993586 64.961 2 0.12142818279817874 0.0011151587242584195 0.005830020882142448 ['ENSG00000123384|ENST00000243077|LRP1', 'nc|ENSG00000123384|Q07954-2|LRP1'] 45148 15949 IPNPAQTSVVV True PC9_epitope_Rep6 1123.62372370131 1123.62262993586 73.644 2 0.12142785154278292 0.0011151587242584195 0.005830065032388509 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 87759 10475 QRDEKVLEL True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 45.181 2 0.12142648260702352 0.0011151587242584195 0.005830247489789577 ['ENSG00000135968|ENST00000309863|GCC2'] 24895 14568 FAYEGPM[Oxidation]YL True H1975_Epitope_Rep2 1105.4790339940098 1105.4779299358602 61.191 2 0.12141646728676724 0.0011151587242584195 0.005831582542744296 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 2491 3674 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 19.094 2 0.12141520623357939 0.0011151587242584195 0.005831750663667008 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 9632 11810 AYAPPPHVI True PC9_epitope_Rep5 963.5178020807899 963.51670993586 50.423 2 0.12141454441713495 0.0011151587242584195 0.00583183889751991 ['ENSG00000128335|ENST00000358502|APOL2'] 45066 11581 IPHSLPGAVAA True PC9_epitope_Rep4 1031.5763795860698 1031.5752899358602 52.306 2 0.12141443457036678 0.0011151587242584195 0.005831853542497713 ['ENSG00000160113|ENST00000291442|NR2F6'] 142561 15549 YYLNEIQSF True NCI_RA007_Epitope_Rep4 1175.5498900547097 1175.5487899358602 67.535 2 0.12140814147445551 0.0011151587242584195 0.005832692609902001 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 106225 15903 STEFNPLIY True H1975_Epitope_Rep2 1082.5284263341398 1082.52732993586 66.372 2 0.12140325958840577 0.0011151587242584195 0.0058333435999584115 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 6271 4249 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 22.736 2 0.12139770399194405 0.0011151587242584195 0.0058340845143806126 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 62956 15840 LLPGKTYSF True PC9_epitope_Rep3 1024.5593325395998 1024.55822993586 66.082 2 0.12139297968078258 0.0011151587242584195 0.005834714637949717 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 115340 15271 TRIGLINDM True PC9_epitope_Rep4 1031.54336520563 1031.54226993586 66.67 2 0.12138869755746634 0.0011151587242584195 0.005835285840444264 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 93679 9109 RQSDLLVKL True NCI_RA007_Epitope_Rep4 1070.64479349906 1070.64368993586 41.877 2 0.12138747344895066 0.0011151587242584195 0.0058354491372006635 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000508212.5_1_4:122723919-122731001:+|nuORF'] 104009 16378 SQDFPGSNL True PC9_epitope_Rep3 963.42977492203 963.42866993586 68.136 2 0.12138309665905923 0.0011151587242584195 0.0058360330399377346 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 121697 11825 VFLENVIR True H1975_Epitope_Rep1 988.5705659296399 988.56946993586 50.48 2 0.12138084021700385 0.0011151587242584195 0.005836334091703555 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 103372 3083 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 15.875 2 0.12137317013041479 0.0011151587242584195 0.005837357538849285 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 96210 15367 RYPTSIASL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 63.927 2 0.12137033628651082 0.0011151587242584195 0.005837735713170163 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 71745 11124 MEENFAVEAA True H1975_Epitope_Rep2 1109.46992548185 1109.4688299358602 47.823 2 0.12136939669320035 0.0011151587242584195 0.005837861106470719 ['ENSG00000026025|ENST00000544301|VIM'] 4455 10062 AIVAYGLYK True NCI_RA007_Epitope_Rep4 996.56441792004 996.56332993586 45.549 2 0.12136708371007106 0.0011151587242584195 0.005838169796543015 ['ENST00000470543.1_1_3:42826765-42845976:-|nuORF', 'ENSG00000181061|ENST00000321331|HIGD1A', 'nc|ENSG00000181061|Q9Y241-2|HIGD1A'] 100966 19859 SLFPGKLEV True PC9_epitope_Rep1 988.5593325396 988.55822993586 81.204 2 0.12136050955462227 0.0011151587242584195 0.005839047268572548 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 79247 6467 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 31.474 2 0.12135960691910552 0.0011151587242584195 0.005839167756075274 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 129256 23045 VQVEDIVFL True PC9_epitope_Rep1 1060.580461907 1060.57936993586 93.442 2 0.12135934276461692 0.0011151587242584195 0.005839203016962875 ['ENSG00000197780|ENST00000338366|TAF13'] 129251 13242 VQVDGKIGL True PC9_epitope_Rep1 927.5389314481899 927.53782993586 55.801 2 0.12135848956000984 0.0011151587242584195 0.005839316909130366 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 206 9719 AAFEKALEV True NCI_RA007_Epitope_Rep3 976.5229470308798 976.52184993586 45.301 2 0.12135711380317538 0.0011151587242584195 0.0058395005600716905 ['IFIT5|p.R294Gfs*4|1|0.28|ENSG00000152778|chr10:89418079-89418079|A/-|frameshift_variant', 'ENSG00000152778|ENST00000371795|IFIT5'] 8167 11300 ATESPDTGLYY True H1975_Epitope_Rep2 1215.52954853295 1215.5284499358602 48.512 2 0.12135551248540098 0.0011151587242584195 0.005839714328442218 ['ENSG00000104805|ENST00000405315|NUCB1'] 131058 14398 VTDSGPTFNYL True H1975_Epitope_Rep2 1212.56626839484 1212.56567496793 60.531 1 0.12135448291440368 0.0011151587242584195 0.005839851775353864 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 9177 5159 AVLKPGAWSRK True NCI_RA007_Epitope_Rep4 1211.7138761183899 1211.71222490379 26.369 3 0.1213469220499819 0.0011151587242584195 0.005840861241622707 ['ENST00000308521.9_1_22:39436844-39436913:+|nuORF'] 94705 14894 RSDFFTSFY True H1975_Epitope_Rep3 1168.5189242796 1168.5178299358602 62.675 2 0.12134603904366763 0.0011151587242584195 0.00584097914469808 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENSG00000218823|ENST00000404991|PAPOLB'] 35981 5747 GTVIHFNNPK True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59143490379 28.725 3 0.1213382303236687 0.0011151587242584195 0.005842021902242722 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 82931 14294 PSDLTVGQFY True H1975_Epitope_Rep1 1125.5342399905699 1125.53367496793 60.168 1 0.12132847102333705 0.0011151587242584195 0.005843325391330409 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 99941 10356 SINPDEAVAY True H1975_Epitope_Rep1 1077.4978544818498 1077.49727496793 44.782 1 0.12132409790002092 0.0011151587242584195 0.0058439095744431315 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 125198 15456 VIIEKTYSL True PC9_epitope_Rep3 1064.61176203528 1064.6106699358602 64.604 2 0.1213199015409624 0.0011151587242584195 0.00584447019818671 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 105088 7808 SRDTTMYAV True PC9_epitope_Rep6 1042.47534521546 1042.4742499358601 39.424 2 0.1213196589628312 0.0011151587242584195 0.005844502607663908 ['ENSG00000165688|ENST00000371717|PMPCA'] 8042 6552 ATDPNILGR True NCI_RA007_Epitope_Rep3 955.50869394907 955.50758993586 32.818 2 0.12131694109457594 0.0011151587242584195 0.005844865738510267 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 61029 8603 LIEVDDER True PC9_epitope_Rep3 987.4872897981498 987.48618993586 38.041 2 0.12131118845769427 0.0011151587242584195 0.005845634413575088 ['ENSG00000137154|ENST00000380394|RPS6'] 115723 8165 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.5853349679301 38.09 1 0.12130931093621278 0.0011151587242584195 0.005845885311899122 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 58494 11721 LEQEADLIEA True H1975_Epitope_Rep2 1129.55028397753 1129.54918993586 50.161 2 0.12130817416809243 0.0011151587242584195 0.005846037226442863 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-3|ANKLE2'] 49310 5007 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 24.342 2 0.12130527112529006 0.0011151587242584195 0.0058464251985505785 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 98015 5920 SEQETLVRP True H1975_Epitope_Rep2 1057.54038800017 1057.53928993586 27.758 2 0.1212999745748286 0.0011151587242584195 0.005847133111661074 ['nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-5|MDM2', 'nc|ENSG00000135679|Q00987-9|MDM2'] 96312 11611 RYSEYAEEF True PC9_epitope_Rep6 1192.5036681382796 1192.50256993586 55.786 2 0.12128464442137271 0.0011151587242584195 0.005849182543144952 ['ENSG00000139505|ENST00000381801|MTMR6'] 29817 6918 FVQYVNER True NCI_RA007_Epitope_Rep2 1053.5243440132097 1053.5232499358601 31.529 2 0.1212784263137583 0.0011151587242584195 0.005850014019035694 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 109796 8313 TEEDHPFAV True H1975_Epitope_Rep3 1043.45598966987 1043.4548899358601 36.96 2 0.12127424747151244 0.0011151587242584195 0.005850572872357741 ['nc|ENSG00000141556|Q9BTW9-4|TBCD', 'ENSG00000141556|ENST00000355528|TBCD', 'ENST00000573364.1_1_17:80890567-80895237:+|nuORF', 'nc|ENSG00000141556|Q9BTW9-2|TBCD', 'ENST00000576677.5_1_17:80888388-80900336:+|nuORF', 'ENST00000576603.5_1_17:80889830-80900336:+|nuORF'] 40666 10323 HRQEIQVVL True PC9_epitope_Rep4 1120.63529144452 1120.6341899358601 47.398 2 0.1212728511359245 0.0011151587242584195 0.00585075962154094 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 102239 12420 SLSGELREV True PC9_epitope_Rep2 988.5189242795999 988.51782993586 53.081 2 0.12127277042779373 0.0011151587242584195 0.00585077041581294 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 34023 13352 GLVDEKALAQA True PC9_epitope_Rep2 1113.60298825673 1113.60188993586 56.631 2 0.12127187885556003 0.0011151587242584195 0.005850889660028218 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF', 'ENST00000511907.1_1_4:1208072-1210006:-|nuORF', 'ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 72804 18837 MPFGNVVSA True PC9_epitope_Rep4 920.4425885351999 920.44203496793 80.543 1 0.12127071885136709 0.0011151587242584195 0.00585104480949803 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 95651 8759 RYFDPANGKF True NCI_RA007_Epitope_Rep4 1213.5880068989297 1213.58635490379 40.489 3 0.12126951997973297 0.0011151587242584195 0.005851205161676263 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 140131 14980 YQQQQSLAL True PC9_epitope_Rep5 1077.54547338061 1077.54436993586 62.624 2 0.12126506348134018 0.0011151587242584195 0.0058518012675018325 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 115145 18286 TRDEYLSLVA True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 75.127 2 0.1212637530021323 0.0011151587242584195 0.005851976569844705 ['ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 11921 12481 DHMDGSYSL True PC9_epitope_Rep1 1023.3967605415901 1023.3956699358599 52.876 2 0.12126374916522153 0.0011151587242584195 0.005851977083114447 ['ENSG00000112290|ENST00000392589|WASF1'] 68635 22790 LTIEDGIFEV True PC9_epitope_Rep3 1134.58085582982 1134.5802749679299 92.932 1 0.12126268324982695 0.0011151587242584195 0.005852119674038856 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 126285 5821 VLIAAHGNSLR True NCI_RA007_Epitope_Rep4 1149.66184054553 1149.66019490379 29.016 3 0.12125644764447122 0.0011151587242584195 0.005852953899016348 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 11881 14179 DHIHIIAL True PC9_epitope_Rep6 930.52870111766 930.52760993586 66.418 2 0.12125352735587114 0.0011151587242584195 0.005853344627212418 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 89767 20296 RAIDFSPYL True PC9_epitope_Rep3 1080.56039516876 1080.55928993586 83.319 2 0.12124977829528824 0.0011151587242584195 0.00585384628064483 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 67966 16438 LTDEAFEFY True H1975_Epitope_Rep2 1133.49170647225 1133.4906099358602 68.449 2 0.12124881882232047 0.0011151587242584195 0.005853974672333858 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 22444 6730 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54372993586 30.801 2 0.12124582998608834 0.0011151587242584195 0.005854374640511884 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 105395 7905 SRSDSNFQV True PC9_epitope_Rep5 1038.47303671634 1038.47192993586 35.348 2 0.12124473818390687 0.0011151587242584195 0.005854520752910874 ['ENST00000505131.1_1_4:48384636-48389420:+|nuORF', 'ENSG00000109171|ENST00000264313|SLAIN2'] 120522 16540 VEFLEPLEA True H1975_Epitope_Rep2 1045.5331773614098 1045.53208993586 68.846 2 0.12124020743164493 0.0011151587242584195 0.005855127127093575 ['ENSG00000122965|ENST00000261741|RBM19'] 42522 12349 IEENSNVILP True H1975_Epitope_Rep3 1126.58700383942 1126.5859099358602 52.686 2 0.12123511765358695 0.0011151587242584195 0.0058558083918088125 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000417282.1_1_7:56372411-56373020:-|nuORF'] 479 8877 AAMKALQAL True NCI_RA007_Epitope_Rep3 915.5211732090698 915.52006993586 42.009 2 0.12122795790204338 0.0011151587242584195 0.005856766852749255 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'STAU2|p.K410Ifs*9|1|0.08|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant', 'ENST00000521451.5_1_8:74528012-74659064:-|nuORF'] 73039 12610 M[Oxidation]RDPIRILV True PC9_epitope_Rep6 1127.64849936095 1127.6474099358602 59.962 2 0.12122680382839789 0.0011151587242584195 0.005856921360516326 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 1654 8911 AEFVEVTK True PC9_epitope_Rep1 921.4807478657299 921.47964993586 39.115 2 0.12122672157520538 0.0011151587242584195 0.005856932372753398 ['CON__P02769'] 29404 21301 FVDPVLNQL True PC9_epitope_Rep2 1043.56514619603 1043.56404993586 87.398 2 0.12122241109192393 0.0011151587242584195 0.0058575094979839955 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 46607 10256 ITDEEELNDY True H1975_Epitope_Rep2 1239.51429239163 1239.51318993586 44.456 2 0.121211520253957 0.0011151587242584195 0.005858967906279338 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 104461 21120 SQLPNFWKL True PC9_epitope_Rep5 1131.60767971435 1131.60658993586 86.298 2 0.12120948964291756 0.0011151587242584195 0.005859239867664535 ['ENSG00000112685|ENST00000230449|EXOC2'] 39168 10825 HIDPNFASL True NCI_RA007_Epitope_Rep3 1012.4977949122 1012.49668993586 49.629 2 0.12120855557264042 0.0011151587242584195 0.005859364972597317 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 35879 5802 GTMTGM[Oxidation]LYK True NCI_RA007_Epitope_Rep3 1016.46708941132 1016.46598993586 29.799 2 0.12119688416462512 0.0011151587242584195 0.005860928405595679 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 25463 7168 FEELDRPAA True H1975_Epitope_Rep3 1046.50327421546 1046.5021699358601 32.546 2 0.12119589470526773 0.0011151587242584195 0.005861060966479071 ['ENSG00000150990|ENST00000308736|DHX37'] 10053 12668 AYSRVQYQF True PC9_epitope_Rep2 1160.5614577979202 1160.56036993586 54.033 2 0.12119316815000404 0.0011151587242584195 0.005861426266551007 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 117042 21455 TVIATNILL True PC9_epitope_Rep2 956.59063266788 956.58952993586 87.999 2 0.12118749606378237 0.0011151587242584195 0.0058621862760357265 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 111150 21835 THFNFAIVF True PC9_epitope_Rep5 1094.5549158654999 1094.55380993586 89.021 2 0.12118056123697825 0.0011151587242584195 0.005863115612446682 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 53039 8063 KPLQPLPNTA True PC9_epitope_Rep4 1077.61824439805 1077.6171499358602 38.465 2 0.12117120084827634 0.0011151587242584195 0.0058643702267987706 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'ENST00000436442.2_2_6:30314274-30314587:+|nuORF'] 4319 23139 AIIPYIPTL True PC9_epitope_Rep5 999.60046907559 999.59936993586 93.992 2 0.12116542635054779 0.0011151587242584195 0.0058651443391322475 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 140754 16781 YSDEFGNLDF True H1975_Epitope_Rep1 1205.4876837209702 1205.4871749679298 69.949 1 0.12116266667323157 0.0011151587242584195 0.005865514328689396 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 140022 12796 YQEELSREL True PC9_epitope_Rep5 1165.5615173675699 1165.5604299358602 54.23 2 0.12116264188542043 0.0011151587242584195 0.005865517652091156 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 52821 9978 KPAEFTVDA True PC9_epitope_Rep5 976.4865615221598 976.48546993586 43.355 2 0.1211624537938544 0.0011151587242584195 0.005865542870345582 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 87294 11618 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.5123499358601 49.566 2 0.12116178877661161 0.0011151587242584195 0.0058656320329494825 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 62957 14250 LLPGKTYSF True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 62.717 2 0.12116178620634152 0.0011151587242584195 0.005865632377562629 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 34906 19365 GQMGSFIRL True PC9_epitope_Rep3 1007.5222358382299 1007.52112993586 79.711 2 0.12115784814125287 0.0011151587242584195 0.0058661604032820445 ['ENSG00000119392|ENST00000309971|GLE1'] 35651 9286 GTDNGDLPSY True H1975_Epitope_Rep3 1037.43016884485 1037.42957496793 40.714 1 0.12115772886552244 0.0011151587242584195 0.005866176396798064 ['ENSG00000135249|ENST00000257700|RINT1'] 117088 21713 TVISILNTI True PC9_epitope_Rep4 972.58554728744 972.58499496793 91.716 1 0.12115708888097075 0.0011151587242584195 0.0058662622121599005 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 115459 10484 TRMSTVSEL True PC9_epitope_Rep3 1022.5066453437399 1022.5055499358599 45.264 2 0.12115561465848912 0.0011151587242584195 0.005866459894935765 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 96984 8608 SAYQHPASF True PC9_epitope_Rep5 1006.4508447197799 1006.44974993586 38.054 2 0.1211538348997953 0.0011151587242584195 0.005866698556622487 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 76893 10510 NRDLSTPGL True PC9_epitope_Rep5 971.5036085686299 971.50250993586 45.414 2 0.12114803850221813 0.0011151587242584195 0.005867475906425345 ['ENSG00000131711|ENST00000296755|MAP1B'] 121380 6154 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51731496793 28.644 1 0.12113796176892588 0.0011151587242584195 0.00586882752787014 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 137444 10986 YEDGNVQLV True H1975_Epitope_Rep2 1035.4872897981497 1035.48677496793 47.284 1 0.12113787271604867 0.0011151587242584195 0.0058688394741467685 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 58068 8817 LEIPPPKPP True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 38.837 2 0.12113268115161446 0.0011151587242584195 0.00586953595385817 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 8406 16638 ATLSKIIQV True PC9_epitope_Rep3 971.6015317047498 971.60042993586 69.133 2 0.12113082896434826 0.0011151587242584195 0.0058697844555076735 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 103235 8210 SPLFSQHTA True PC9_epitope_Rep2 986.48214484806 986.48104993586 36.938 2 0.1211276951636423 0.0011151587242584195 0.005870204930272815 ['ENSG00000167721|ENST00000301364|TSR1'] 17395 12613 EHDPQYAVI True PC9_epitope_Rep5 1070.50327421546 1070.5021699358601 53.518 2 0.12112737854876598 0.0011151587242584195 0.005870247413413211 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 89468 11334 QYFPKAPEF True NCI_RA007_Epitope_Rep3 1125.5494961318898 1125.54838993586 51.699 2 0.12112475389744562 0.0011151587242584195 0.00587059959867441 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 135084 7195 WEDEGVRAC True H1975_Epitope_Rep3 1063.4392940599098 1063.43818993586 32.651 2 0.12112274658541258 0.0011151587242584195 0.00587086896103679 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 111325 12368 THNIIVNQL True PC9_epitope_Rep4 1050.5821932425 1050.58108993586 55.38 2 0.12111667724386943 0.0011151587242584195 0.005871683482947341 ['ENSG00000198356|ENST00000357332|GET3'] 22282 13955 ETDEKDFYLYY True H1975_Epitope_Rep2 1484.6347418774799 1484.6336499358601 58.827 2 0.12111475175555748 0.0011151587242584195 0.005871941911712563 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 104120 2550 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 14.721 2 0.12111342660757149 0.0011151587242584195 0.005872119772459191 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 29004 20486 FTEGELMSV True PC9_epitope_Rep1 1011.4582981689899 1011.45720993586 83.613 2 0.12111285766717174 0.0011151587242584195 0.005872196136990294 ['STK11-HMHA1|1|fusion', 'STK11|p.L282Afs*3|2|0.54|ENSG00000118046|chr19:1221314-1221315|-/C|frameshift_variant', 'ENSG00000118046|ENST00000326873|STK11', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'STK11|p.D284Efs*5|1|0.57|ENSG00000118046|chr19:1221326-1221333|CTGACCTG/-|frameshift_variant', 'STK11|p.P281Rfs*6|1|0.7|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'STK11|p.N259Kfs*28|1|0.77|ENSG00000118046|chr19:1221255-1221255|C/-|frameshift_variant', 'STK11|p.T250Rfs*37|1|0.54|ENSG00000118046|chr19:1221227-1221227|C/-|frameshift_variant', 'STK11|p.D176Tfs*111|1|0.54|ENSG00000118046|chr19:1220433-1220433|G/-|frameshift_variant', 'STK11|p.H168Lfs*119|1|0.44|ENSG00000118046|chr19:1220411-1220411|A/-|frameshift_variant', 'STK11|p.E265Gfs*19|1|0.52|ENSG00000118046|chr19:1221271-1221280|GAGAACATCG/-|frameshift_variant', 'STK11|p.K44Sfs*7|1|0.24|ENSG00000118046|chr19:1207041-1207041|C/-|frameshift_variant', 'STK11|p.D30Gfs*133|1|0.53|ENSG00000118046|chr19:1207000-1207001|-/G|frameshift_variant', 'STK11|p.D53Gfs*110|2|0.64|ENSG00000118046|chr19:1207065-1207066|-/G|frameshift_variant', 'STK11|p.Q37Pfs*123|1|0.29|ENSG00000118046|chr19:1207022-1207029|CAGCCGCG/-|frameshift_variant', 'STK11|p.R75Sfs*23|1|0.39|ENSG00000118046|chr19:1207137-1207138|-/CTCCT|frameshift_variant', 'STK11|p.V77Sfs*19|1|0.77|ENSG00000118046|chr19:1207140-1207140|C/-|frameshift_variant', 'STK11|p.D53Tfs*11|4|0.32|ENSG00000118046|chr19:1207066-1207066|G/-|frameshift_variant', 'STK11|p.E57Kfs*7|2|0.43|ENSG00000118046|chr19:1207078-1207078|G/-|frameshift_variant', 'STK11|p.Y60*|1|0.59|ENSG00000118046|chr19:1207093-1207093|C/-|frameshift_variant', 'STK11|p.A43Pfs*8|1|0.17|ENSG00000118046|chr19:1207038-1207038|G/-|frameshift_variant', 'STK11|p.K41Tfs*8|1|0.14|ENSG00000118046|chr19:1207035-1207041|AGCGGGC/-|frameshift_variant', 'STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 88278 14319 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.48374993586 60.227 2 0.12111148953576222 0.0011151587242584195 0.00587237977480816 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 21960 5044 ESEEYQERY True H1975_Epitope_Rep3 1231.49931103383 1231.4982099358601 24.522 2 0.12110917919268416 0.0011151587242584195 0.005872689893986847 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 67978 13022 LTDEQLLY True H1975_Epitope_Rep2 993.50187723313 993.50132496793 55.208 1 0.1210962676777907 0.0011151587242584195 0.005874423311463286 ['ENSG00000197081|ENST00000356956|IGF2R'] 103927 11830 SQANIAQVL True NCI_RA007_Epitope_Rep5 942.5134449763399 942.51289496793 52.16 1 0.12108598985954076 0.0011151587242584195 0.0058758035030013625 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 88966 17365 QVIEKFEAL True PC9_epitope_Rep3 1075.5913609438699 1075.59026993586 71.966 2 0.12108375037082947 0.0011151587242584195 0.005876104282344045 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 46625 8692 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51257496793 38.432 1 0.12107902105047977 0.0011151587242584195 0.0058767395133029875 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 2810 5718 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep3 863.3694835450299 863.36893496793 27.024 1 0.12107236665478556 0.0011151587242584195 0.005877633429382772 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 70939 16263 LYGKIAEAF True PC9_epitope_Rep2 1010.5436824754598 1010.54258993586 67.796 2 0.12106995871778783 0.0011151587242584195 0.005877956931549108 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 42398 7270 IEDGKAVIP True H1975_Epitope_Rep2 940.5229470308799 940.52184993586 32.9 2 0.12106327025623038 0.0011151587242584195 0.005878855606053019 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK'] 108258 15960 SYIEHIFEI True NCI_RA007_Epitope_Rep4 1149.57062549929 1149.57007496793 69.261 1 0.12105867046987483 0.0011151587242584195 0.005879473720060844 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 97260 12107 SEAEIFYNA True H1975_Epitope_Rep3 1042.46074069714 1042.46017496793 51.735 1 0.12105600197875695 0.0011151587242584195 0.005879832337935469 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 37997 14046 HALGLLYHV True PC9_epitope_Rep4 1021.5709002828102 1021.56980993586 61.937 2 0.12104616988842236 0.0011151587242584195 0.005881153854617268 ['ENSG00000181789|ENST00000314797|COPG1'] 105467 21230 SRVPLLLPL True PC9_epitope_Rep5 1006.65390163078 1006.65280993586 86.711 2 0.12104293882748969 0.0011151587242584195 0.00588158820007351 ['ENSG00000168140|ENST00000304735|VASN'] 103574 7692 SPSPPFGHSA True PC9_epitope_Rep1 982.4508447197801 982.44974993586 34.409 2 0.12104009484137498 0.0011151587242584195 0.00588197053772212 ['ENSG00000141232|ENST00000499247|TOB1'] 54511 15663 KYIEGVSDF True PC9_epitope_Rep3 1056.51277627 1056.51166993586 65.393 2 0.1210398310558199 0.0011151587242584195 0.005882006001555102 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 142871 14558 YYTNSLEKL True PC9_epitope_Rep1 1129.5655401188499 1129.56444993586 60.821 2 0.12103974706616749 0.0011151587242584195 0.005882017293327965 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant', 'ZFHX3|p.S2241Kfs*30|1|0.48|ENSG00000140836|chr16:72795962-72795963|-/C|frameshift_variant'] 67411 7340 LSSPATLNSR True PC9_epitope_Rep3 1044.5563724174801 1044.55526993586 33.243 2 0.12103964201134022 0.0011151587242584195 0.005882031417183904 ['CON__P00761'] 97386 7103 SEDPWEQHA True H1975_Epitope_Rep2 1097.4414022348901 1097.4403099358601 32.251 2 0.1210313908690443 0.0011151587242584195 0.005883140826641199 ['ENSG00000101966|ENST00000371199|XIAP', 'ENST00000468691.5_1_X:122993752-123026581:+|nuORF', 'ENST00000497906.5_1_X:122993701-123026581:+|nuORF'] 115300 8445 TRHGVPISV True PC9_epitope_Rep5 964.5454138109599 964.54430993586 37.426 2 0.12102920561926561 0.0011151587242584195 0.005883434679200895 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000484693.1_1_6:30709216-30709507:-|nuORF', 'ENST00000484168.1_1_6:30709216-30709966:-|nuORF'] 111598 7168 TIDDLEEK True PC9_epitope_Rep3 961.46040634397 961.45930993586 32.583 2 0.12102875416158553 0.0011151587242584195 0.005883495388920112 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 47871 16089 IYIAGHPAF True PC9_epitope_Rep3 987.51780208079 987.51670993586 67.035 2 0.12102612974850432 0.0011151587242584195 0.005883848318685627 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 96345 6298 RYSSM[Oxidation]AASF True PC9_epitope_Rep4 1034.44913084806 1034.4480299358602 31.286 2 0.1210181118783828 0.0011151587242584195 0.005884926686000208 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 38989 16558 HHLVIPSVL True PC9_epitope_Rep2 1013.6022004110899 1013.60110993586 68.929 2 0.12101704973133634 0.0011151587242584195 0.005885069554463358 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 7510 14488 ASDMLQLEY True H1975_Epitope_Rep1 1068.4797618895598 1068.4786699358601 60.928 2 0.1210151828492545 0.0011151587242584195 0.005885320675339187 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 7744 9710 ASQDIIPQLK True NCI_RA007_Epitope_Rep3 1111.62372370131 1111.62262993586 45.267 2 0.12101497108162765 0.0011151587242584195 0.0058853491616087045 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 38840 6178 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 28.805 2 0.12100784371489108 0.0011151587242584195 0.005886307989596702 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 26053 15319 FGIDRPAEL True PC9_epitope_Rep4 1016.5290950404799 1016.52798993586 66.857 2 0.12099466754953139 0.0011151587242584195 0.005888080950193832 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 29321 15571 FVDEPLIHA True PC9_epitope_Rep4 1039.5338460677497 1039.53274993586 67.814 2 0.12099391685757181 0.0011151587242584195 0.00588818197763169 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 111546 6712 TIAPALVSK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 32.491 2 0.12099007800908397 0.0011151587242584195 0.0058886986328262865 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 115418 19964 TRLPIDVQL True PC9_epitope_Rep3 1053.61824439805 1053.6171499358602 82.037 2 0.12098563440605933 0.0011151587242584195 0.005889296734808981 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 125125 7253 VIFTGGVGK True NCI_RA007_Epitope_Rep5 876.5069030439198 876.50580993586 34.576 2 0.12097972624569245 0.0011151587242584195 0.005890092055821075 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 37318 18063 GVSDVDYSL True PC9_epitope_Rep1 953.43419159613 953.43364496793 74.272 1 0.12097537723169316 0.0011151587242584195 0.0058906775609732995 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 134475 19792 VYPQYVIEY True PC9_epitope_Rep4 1172.57537652656 1172.5748749679299 84.256 1 0.12097308374170211 0.001147595602117499 0.0058909863550576326 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 17326 20047 EHAPSIIFM True PC9_epitope_Rep3 1043.5110024481899 1043.5099099358602 82.36 2 0.12096280727224558 0.001147595602117499 0.005892370166784073 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 109737 4791 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 23.518 2 0.12096183506888135 0.001147595602117499 0.005892501098460862 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 138448 17180 YHLDSSGSYVF True PC9_epitope_Rep4 1273.5615173675699 1273.5604299358602 74.089 2 0.12095417448888363 0.001147595602117499 0.005893532887997627 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 109476 14708 TDLLLEPYNK True PC9_epitope_Rep6 1204.6339540318397 1204.6328499358601 68.52 2 0.12095166442841372 0.001147595602117499 0.005893871001849795 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 46628 7576 ITDHLDTQY True H1975_Epitope_Rep2 1104.5087535187201 1104.5076499358602 34.093 2 0.12095130261105722 0.001147595602117499 0.005893919741465445 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 66043 11755 LSEGVTISY True H1975_Epitope_Rep1 967.4862271689901 967.4856749679301 50.21 1 0.12094660351919581 0.001147595602117499 0.00589455278150053 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 137443 10977 YEDGNVQLV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 47.25 2 0.12093698709860527 0.001147595602117499 0.0058958484684971755 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 21541 19463 ERNDLIVFL True PC9_epitope_Rep6 1117.6131590176099 1117.61206993586 87.527 2 0.12093378940450154 0.001147595602117499 0.005896279377625436 ['ENSG00000129636|ENST00000320640|ITFG1'] 141464 15723 YTGTPDWLY True H1975_Epitope_Rep2 1114.4971262058598 1114.49657496793 65.649 1 0.12092802536326666 0.001147595602117499 0.005897056195673482 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 116754 17191 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54427496793 71.579 1 0.12092156967657117 0.001147595602117499 0.005897926345261291 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 111889 15548 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 64.63 2 0.1209193977641204 0.001147595602117499 0.005898219121358643 ['ENSG00000213719|ENST00000375784|CLIC1'] 4000 15746 AHEGSIFAL True PC9_epitope_Rep6 943.4763311916299 943.4752299358599 72.795 2 0.1209154577164062 0.001147595602117499 0.005898750280201629 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 134286 9336 VYNPTPNSL True NCI_RA007_Epitope_Rep3 1003.49746055903 1003.49636993586 43.819 2 0.12091362553239195 0.001147595602117499 0.005898997293315124 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 25758 10904 FETEFNTQP True H1975_Epitope_Rep2 1111.48220441771 1111.4816749679298 46.972 1 0.12091129260498101 0.001147595602117499 0.0058993118307491986 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 8988 9511 AVGLVLPAK True NCI_RA007_Epitope_Rep2 866.5589386167799 866.55784993586 41.61 2 0.12091121922066783 0.001147595602117499 0.005899321725070604 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 118291 21581 TYLPTSPLL True PC9_epitope_Rep1 1003.55899818643 1003.55847496793 87.834 1 0.12090663977420901 0.001147595602117499 0.005899939198570669 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 106643 6476 STSQTFIYK True NCI_RA007_Epitope_Rep3 1073.5393253710097 1073.53822993586 32.505 2 0.12090618753795038 0.001147595602117499 0.005900000179650722 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 71259 21783 LYPQFMFHL True PC9_epitope_Rep2 1194.5895871220598 1194.58848993586 89.259 2 0.12090509324032572 0.001147595602117499 0.005900147741023509 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 26054 16590 FGIDRPAEL True PC9_epitope_Rep5 1016.5290950404799 1016.52798993586 68.819 2 0.12089934631016401 0.001147595602117499 0.005900922749259203 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 134146 12974 VYLEDSGHTL True PC9_epitope_Rep5 1132.5400536470001 1132.53894993586 54.914 2 0.1208991281833485 0.001147595602117499 0.005900952166936274 ['ENSG00000123131|ENST00000379341|PRDX4'] 105256 20628 SRLALLTEL True PC9_epitope_Rep5 1014.60734536118 1014.60624993586 84.396 2 0.12089253169468464 0.001147595602117499 0.00590184187018469 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 141164 7242 YSTEPNNL True H1975_Epitope_Rep3 936.41887588516 936.4183249679301 32.828 1 0.12089092358951814 0.001147595602117499 0.005902058783683406 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 54512 13975 KYIEGVSDF True PC9_epitope_Rep4 1056.51277627 1056.51166993586 61.66 2 0.1208836178620649 0.001147595602117499 0.005903044334027497 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 114997 8410 TRADTTTIL True PC9_epitope_Rep4 990.53457434374 990.53346993586 39.813 2 0.12088234762962409 0.001147595602117499 0.00590321570612952 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 96330 12545 RYSSMAASF True PC9_epitope_Rep1 1018.4542158480599 1018.45310993586 53.124 2 0.12087683788307425 0.001147595602117499 0.005903959104175004 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 32925 7505 GHYTEGAELVD True NCI_RA007_Epitope_Rep2 1189.5251318588498 1189.5240299358602 33.818 2 0.12087520928815888 0.001147595602117499 0.005904178858521774 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 74982 12902 NHQGATPLVL True PC9_epitope_Rep3 1048.56654317836 1048.5654499358602 54.648 2 0.12087325327694701 0.001147595602117499 0.005904442803326179 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 140336 11116 YRDNDSDLAL True PC9_epitope_Rep4 1180.53603089572 1180.5349299358602 50.535 2 0.12086657937425034 0.001147595602117499 0.005905343468740241 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 15050 9301 DYPLEAVR True H1975_Epitope_Rep3 961.48689587533 961.48578993586 40.772 2 0.12085960674756162 0.001147595602117499 0.005906284591305396 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 1055 8563 AEAFGKIVA True H1975_Epitope_Rep2 904.5018176634799 904.50072993586 37.891 2 0.12084940612420583 0.001147595602117499 0.005907661673105897 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 109164 19765 TAM[Oxidation]DVVYAL True PC9_epitope_Rep3 997.4790339940099 997.47792993586 81.254 2 0.12084662547904221 0.001147595602117499 0.005908037113959612 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 47202 4333 IVAGTLTNK True NCI_RA007_Epitope_Rep5 915.53893144819 915.53782993586 23.271 2 0.12084463734636683 0.001147595602117499 0.005908305564595724 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 24164 6153 EYQELM[Oxidation]SVK True H1975_Epitope_Rep3 1141.5325261188498 1141.5314299358602 28.68 2 0.12083597910950832 0.001147595602117499 0.005909474795129508 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'KRT4|p.R420H|1|0.19|ENSG00000170477|chr12:52807731-52807731|C/T|missense_variant', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 53677 7716 KSDVEAIFSK True NCI_RA007_Epitope_Rep4 1122.5920892198599 1122.59098993586 36.351 2 0.12083348671296593 0.001147595602117499 0.005909811416652312 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 104495 21715 SQMATILNL True PC9_epitope_Rep1 989.5215671318899 989.52101496793 88.359 1 0.12083103758900159 0.001147595602117499 0.005910142212053282 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 132530 10860 VVDPNDPQM True PC9_epitope_Rep5 1013.44879611445 1013.44827496793 46.76 1 0.12083023756802147 0.001147595602117499 0.005910250272266996 ['ENSG00000151883|ENST00000281631|PARP8'] 138365 14396 YHGAEIVSL True PC9_epitope_Rep2 987.50254593947 987.50144993586 60.636 2 0.12082355468504523 0.001147595602117499 0.005911153016197018 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 35465 6006 GSIDAITGK True NCI_RA007_Epitope_Rep4 860.46034677432 860.45924993586 29.721 2 0.12080376433162628 0.001147595602117499 0.005913827146742879 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 17284 13980 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 61.679 2 0.12079744283246667 0.001147595602117499 0.00591468157521812 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 103959 19464 SQANRLFYL True PC9_epitope_Rep1 1110.5821932425 1110.58108993586 79.685 2 0.1207972121538171 0.001147595602117499 0.005914712756559226 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 99766 21958 SIIQRLLEV True PC9_epitope_Rep1 1069.64954452633 1069.64844993586 89.28 2 0.12078716826636875 0.001147595602117499 0.00591607056665389 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 26933 18818 FLDPRPLTV True PC9_epitope_Rep1 1056.59678067748 1056.59568993586 77.17 2 0.12078595055621623 0.001147595602117499 0.005916235206787925 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 134390 19485 VYPGDPLRF True PC9_epitope_Rep1 1062.5498304850598 1062.5487299358601 79.767 2 0.12078553325515086 0.001147595602117499 0.005916291628882294 ['ENSG00000170892|ENST00000396388|TSEN34'] 73120 22740 MRLLSFVVL True PC9_epitope_Rep5 1076.64162269492 1076.64052993586 92.474 2 0.12078424132781133 0.001147595602117499 0.005916466310048818 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|159|15.39|0.31|5.63|-|0|SSR2,None|1'] 142713 19495 YYQEYPMSI True PC9_epitope_Rep4 1192.5110620178398 1192.51047496793 83.105 1 0.12077893957409103 0.001147595602117499 0.005917183211577522 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 9626 21329 AYANIISQF True PC9_epitope_Rep5 1025.5181960036098 1025.51767496793 87.098 1 0.12077779457441212 0.001147595602117499 0.0059173380492273005 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 6387 7019 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 31.968 2 0.12077264970874256 0.001147595602117499 0.005918033835305395 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 38895 9980 HHFEGAQIL True PC9_epitope_Rep4 1050.5246783663797 1050.5235899358602 46.048 2 0.12076930096656789 0.001147595602117499 0.005918486758515862 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 9218 15401 AVNPHFIAV True PC9_epitope_Rep1 966.5287011176599 966.52760993586 64.059 2 0.12076596154975955 0.001147595602117499 0.005918938454171035 ['ENSG00000106789|ENST00000375077|CORO2A'] 325 19489 AAIEIFEKV True PC9_epitope_Rep1 1018.5698972232999 1018.56880993586 79.782 2 0.12076459706910853 0.001147595602117499 0.0059191230260216025 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 71903 6986 MEQELAHAV True H1975_Epitope_Rep3 1026.4804305958999 1026.47932993586 31.835 2 0.12076279485336734 0.001147595602117499 0.005919366818449968 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 115482 8989 TRNPVSEEL True PC9_epitope_Rep2 1043.52473793603 1043.52364993586 39.93 2 0.12075940824508198 0.001147595602117499 0.0059198249640841916 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 39636 18645 HLPDAAALLPV True PC9_epitope_Rep6 1115.63389446219 1115.63278993586 84.361 2 0.12075824059478683 0.001147595602117499 0.00591998293366092 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 97431 4953 SEEEGVPST True H1975_Epitope_Rep2 933.39272070697 933.39217496793 24.134 1 0.12075262848844054 0.001147595602117499 0.005920742244178966 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 73593 11664 MVVQDGIVKA True PC9_epitope_Rep2 1058.57941636118 1058.57830993586 50.196 2 0.12075168698534985 0.001147595602117499 0.005920869637611527 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 97122 11513 SDLISVLR True H1975_Epitope_Rep3 901.5232813840499 901.52218993586 49.41 2 0.1207497303729158 0.001147595602117499 0.005921134392596599 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 75124 13156 NHYGGVVSL True PC9_epitope_Rep3 944.4715801643599 944.47048993586 55.634 2 0.12073682882628091 0.001147595602117499 0.005922880428354538 ['nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 43936 20193 IIDGKIFCV True PC9_epitope_Rep3 1006.5521389841799 1006.55104993586 82.931 2 0.12073234413109912 0.001147595602117499 0.005923487484076749 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 125979 11539 VLDPKVGFY True H1975_Epitope_Rep2 1036.5593325395998 1036.55822993586 49.444 2 0.12072935437884683 0.001147595602117499 0.005923892215623978 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 1646 6528 AEFVEVTK True H1975_Epitope_Rep3 921.4807478657299 921.4801949679301 30.077 1 0.12072422483378131 0.001147595602117499 0.005924586680138307 ['CON__P02769'] 92948 19650 RPGTALVLLEA True PC9_epitope_Rep1 1138.6710082469 1138.66990993586 80.408 2 0.12071684461058495 0.001147595602117499 0.005925585992683631 ['ENSG00000261150|ENST00000615648|EPPK1'] 1675 5712 AEGAPQVEA True H1975_Epitope_Rep3 870.4083112014599 870.40776496793 27.0 1 0.1207027215871462 0.001147595602117499 0.005927498767069461 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'CALD1|p.T726Lfs*13|1|0.67|ENSG00000122786|chr7:134960083-134960083|C/-|frameshift_variant', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1', 'ENST00000472096.1_1_7:134625950-134632541:+|nuORF'] 38831 6099 HHDDPEVL True PC9_epitope_Rep1 960.4301092752 960.42900993586 28.274 2 0.1206979147954115 0.001147595602117499 0.005928149920181382 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 33870 20856 GLPRFGIEMV True PC9_epitope_Rep3 1117.5954007784899 1117.59430993586 85.496 2 0.12068277234335077 0.001147595602117499 0.005930201652559427 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant'] 140112 14320 YQNQGIYQV True PC9_epitope_Rep2 1111.52982331647 1111.5287299358602 60.346 2 0.12068043552241196 0.001147595602117499 0.00593051834278105 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 24477 19587 FAEGFVRAL True PC9_epitope_Rep3 1008.5392658013598 1008.53816993586 80.578 2 0.1206790237808218 0.001147595602117499 0.005930709672571401 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 15340 5118 EAGEQGDIEPR True PC9_epitope_Rep3 1199.5418445521498 1199.54074993586 24.773 2 0.1206770050031952 0.001147595602117499 0.005930983282905003 ['ENSG00000145907|ENST00000356245|G3BP1'] 3275 6140 AGFAGDDAPR True PC9_epitope_Rep3 975.4410083120698 975.43990993586 28.664 2 0.12067538502896001 0.001147595602117499 0.005931202851263741 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 38341 7226 HEIEGTGLP True H1975_Epitope_Rep1 951.4661604307499 951.46506993586 32.805 2 0.12067450576612616 0.001147595602117499 0.005931322028271436 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 72231 10381 MHFESGSTL True PC9_epitope_Rep4 1007.43823143075 1007.43712993586 47.63 2 0.12067345077092205 0.001147595602117499 0.005931465027475692 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 106065 7275 STAGLIIGK True NCI_RA007_Epitope_Rep5 858.51746772762 858.51636993586 34.66 2 0.12066857945005559 0.001147595602117499 0.005932125353774983 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA2|p.Q205Rfs*191|1|0.14|ENSG00000104967|chr19:45940729-45940729|G/-|frameshift_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 12425 19279 DIVAINDPFI True H1975_Epitope_Rep3 1115.58627556343 1115.5851699358602 80.83 2 0.12066706019280139 0.001147595602117499 0.005932331309632645 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 71215 20821 LYPEGLAQL True PC9_epitope_Rep2 1002.5385970950199 1002.53750993586 85.532 2 0.12066243542418816 0.001147595602117499 0.005932958302522402 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 66150 12504 LSEPEEAAALY True H1975_Epitope_Rep2 1191.5659340416698 1191.5648299358602 53.188 2 0.1206604013325221 0.001147595602117499 0.005933234090543911 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF'] 3976 12578 AHDTTLVAL True PC9_epitope_Rep4 939.50254593947 939.50144993586 56.209 2 0.12065866559424518 0.001147595602117499 0.00593346943685201 ['ENSG00000134575|ENST00000672073|ACP2'] 21263 20832 ERDRLILFL True PC9_epitope_Rep5 1173.6869926642098 1173.6858899358601 85.179 2 0.12065828409083448 0.001147595602117499 0.005933521165584286 ['ENSG00000138246|ENST00000260818|DNAJC13'] 141907 5234 YVEGVHQQY True H1975_Epitope_Rep2 1121.51417325233 1121.5130699358601 25.2 2 0.12065235801763788 0.001147595602117499 0.005934324749048081 ['ENSG00000062716|ENST00000262291|VMP1'] 14159 13385 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.4579299358602 56.619 2 0.12065201648451875 0.001147595602117499 0.005934371064635807 ['ENSG00000149823|ENST00000279281|VPS51'] 105284 6810 SRLSSTSSL True PC9_epitope_Rep1 936.4876241513201 936.48652993586 31.0 2 0.12063889546578115 0.001147595602117499 0.005936150684139582 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 21226 8753 ERDPQSPEF True PC9_epitope_Rep3 1103.4883524273098 1103.48724993586 38.621 2 0.120633177840687 0.001147595602117499 0.0059369263355263146 ['MSANTD4|p.E277Vfs*13|1|0.06|ENSG00000170903|chr11:106009731-106009743|CCAAGTTCATTTT/-|frameshift_variant', 'ENSG00000170903|ENST00000301919|MSANTD4'] 1475 13375 AEEIPLKILA True H1975_Epitope_Rep1 1095.6539612004299 1095.65286993586 56.557 2 0.12063190310223632 0.001147595602117499 0.005937099279674124 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'IGF2BP2|p.A393Lfs*38|1|0.5|ENSG00000073792|chr3:185672565-185672565|G/-|frameshift_variant', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 125124 7165 VIFTGGVGK True NCI_RA007_Epitope_Rep5 876.5069030439198 876.50580993586 34.235 2 0.12062545032090534 0.001147595602117499 0.005937974805946716 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 35876 8465 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.47106993586 39.243 2 0.12062053630454332 0.001147595602117499 0.0059386416340867915 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 8400 9337 ATLQYIVGR True NCI_RA007_Epitope_Rep4 1019.5763795860698 1019.57528993586 42.771 2 0.12060740438635274 0.001147595602117499 0.0059404239838957125 ['ENSG00000085377|ENST00000652536|PREP'] 54998 16690 KYQIINEEF True PC9_epitope_Rep2 1182.5920892198599 1182.59098993586 69.446 2 0.12060015277371869 0.001147595602117499 0.00594140844407065 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 43674 12087 IHDGM[Oxidation]NLEL True PC9_epitope_Rep1 1056.49099566004 1056.4898899358602 51.353 2 0.12059866622140744 0.001147595602117499 0.005941610274245702 ['ENSG00000198258|ENST00000586895|UBL5'] 26190 8130 FHDGSVHIV True PC9_epitope_Rep2 1009.49812926537 1009.49702993586 36.629 2 0.12059555989352279 0.001147595602117499 0.005942032044019884 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 17810 7340 EHSTEGSVSL True PC9_epitope_Rep3 1044.47236801 1044.4712699358602 33.243 2 0.12059536541906875 0.001147595602117499 0.005942058450268899 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 32922 6972 GHYTEGAELVD True H1975_Epitope_Rep1 1189.5251318588498 1189.5240299358602 31.859 2 0.12059425604110886 0.001147595602117499 0.005942209086695742 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 29497 20845 FVFPGELLL True NCI_RA007_Epitope_Rep3 1033.5848190114498 1033.5837299358602 90.769 2 0.12059197156514027 0.001147595602117499 0.005942519295066336 ['ENSG00000105281|ENST00000542575|SLC1A5'] 74798 10233 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.4657899358601 44.697 2 0.12059032046820033 0.001147595602117499 0.005942743506916727 ['ENSG00000144597|ENST00000396842|EAF1'] 52482 6791 KKVNVQVSF True NCI_RA007_Epitope_Rep4 1047.6076797143498 1047.60658993586 32.744 2 0.12058895980736455 0.001147595602117499 0.005942928285005112 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant'] 4074 10704 AHLGSSSVAL True PC9_epitope_Rep5 940.4977949122 940.49668993586 46.162 2 0.12058761637473313 0.001147595602117499 0.005943110729003736 ['ENSG00000169905|ENST00000609928|TOR1AIP2', 'TOR1AIP2|p.S241Lfs*68|1|0.42|ENSG00000169905|chr1:179846764-179846764|G/-|frameshift_variant'] 77004 11341 NRHAVVMEL True PC9_epitope_Rep5 1067.55459859567 1067.5535099358601 48.62 2 0.12058574471295613 0.001147595602117499 0.005943364917938251 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2'] 44509 23658 ILLPQFLGV True PC9_epitope_Rep1 998.6164534928998 998.61534993586 95.789 2 0.12058544166777455 0.001147595602117499 0.005943406075268053 ['ENSG00000099282|ENST00000373290|TSPAN15'] 67408 6647 LSSPATLNSR True PC9_epitope_Rep2 1044.5563724174801 1044.55526993586 30.976 2 0.12058429900888493 0.001147595602117499 0.00594356126515486 ['CON__P00761'] 32092 8410 GESSLILKA True NCI_RA007_Epitope_Rep4 916.52294703088 916.52184993586 39.163 2 0.12057587852106892 0.001147595602117499 0.005944705013314468 ['ENSG00000139567|ENST00000388922|ACVRL1'] 104010 16468 SQDFPGSNL True PC9_epitope_Rep3 963.42977492203 963.42866993586 68.483 2 0.12057557852456914 0.001147595602117499 0.005944745765565411 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 98012 9932 SEQESLLQQA True H1975_Epitope_Rep2 1131.54078192299 1131.53968993586 43.193 2 0.1205736796199685 0.001147595602117499 0.005945003723693434 ['ENSG00000198952|ENST00000361813|SMG5'] 140199 11139 YQVAAAESHPL True PC9_epitope_Rep3 1184.5825871653199 1184.5814899358602 47.845 2 0.12057036888407718 0.001147595602117499 0.00594545349925258 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 40749 4228 HRTELETKL True PC9_epitope_Rep6 1125.61422164677 1125.61258490379 23.237 3 0.12055559980821784 0.001147595602117499 0.005947460336945498 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 4717 14245 ALDAAVLAY True H1975_Epitope_Rep2 905.4858332461699 905.48528496793 59.942 1 0.12055116937544169 0.001147595602117499 0.0059480624778267795 ['ENSG00000146281|ENST00000275072|PM20D2'] 21702 17731 ERSNDYFVL True PC9_epitope_Rep4 1141.54038800017 1141.53928993586 76.225 2 0.12054664235990585 0.001147595602117499 0.0059486778067828735 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 125845 18796 VLAETLTQV True PC9_epitope_Rep5 972.5491617787198 972.54806993586 77.311 2 0.12054208402201887 0.001147595602117499 0.005949297456001476 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 128553 13912 VPTANVSVVDL True H1975_Epitope_Rep1 1112.607739284 1112.60717496793 58.665 1 0.1205187431898557 0.001147595602117499 0.005952471339056285 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF'] 13969 6927 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 32.045 2 0.1205061266874043 0.001147595602117499 0.005954187617662619 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 47610 17202 IVWQEDPRL True PC9_epitope_Rep2 1154.6084079903396 1154.60730993586 71.426 2 0.12050538306413427 0.001147595602117499 0.00595428879110293 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 61978 15994 LLDPASFEY True H1975_Epitope_Rep1 1053.50187723313 1053.50137496793 66.855 1 0.12050226766082497 0.001147595602117499 0.005954712674612863 ['ENSG00000105397|ENST00000525621|TYK2'] 115483 10159 TRNPVSEEL True PC9_epitope_Rep3 1043.52473793603 1043.52364993586 44.03 2 0.12049757716179686 0.001147595602117499 0.005955350922106014 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 109152 21422 TAMDVVYAL True PC9_epitope_Rep2 981.4841189940099 981.48302993586 87.872 2 0.12049537575234409 0.001147595602117499 0.005955650496222935 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 37594 11601 GVVPTIQKV True PC9_epitope_Rep4 939.5753169569098 939.57420993586 52.384 2 0.12048749578167972 0.0011731065327370042 0.00595672294586661 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 38112 14692 HAYIISSL True PC9_epitope_Rep4 902.4861675993401 902.48506993586 64.446 2 0.12047703068852851 0.0011731065327370042 0.0059581475175048935 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 120153 13644 VEALTTLEVA True H1975_Epitope_Rep2 1044.5702911461199 1044.56918993586 57.622 2 0.12046168085187464 0.0011731065327370042 0.0059602376317848225 ['ENSG00000149806|ENST00000529639|FAU'] 98979 7515 SHDDGNIDL True PC9_epitope_Rep6 984.41485313388 984.41374993586 38.161 2 0.12045759439322186 0.0011731065327370042 0.005960794186096959 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 111034 10615 THDEAVQVL True PC9_epitope_Rep1 1010.5032742154598 1010.50216993586 45.723 2 0.12044574546884702 0.0011731065327370042 0.005962408234591205 ['ENSG00000101400|ENST00000217381|SNTA1', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 39112 7434 HHYEGAVVI True PC9_epitope_Rep6 1023.5137793295098 1023.5126899358601 37.825 2 0.12043469153508318 0.0011731065327370042 0.005963914375041947 ['ENSG00000163655|ENST00000496455|GMPS', 'GMPS|p.G20R|1|0.13|ENSG00000163655|chr3:155893548-155893548|G/C|missense_variant'] 39072 19601 HHSSVIFIF True PC9_epitope_Rep2 1085.56581490237 1085.56470993586 80.779 2 0.12043110631381335 0.0011731065327370042 0.005964402954837256 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 78592 22050 NYSGAAEYLYF True PC9_epitope_Rep5 1296.56626839484 1296.56567496793 89.842 1 0.12043094170147943 0.0011731065327370042 0.005964425388494431 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 125051 8763 VIDPVAPRY True H1975_Epitope_Rep3 1028.5654805492 1028.5643899358602 38.713 2 0.12043086411533212 0.0011731065327370042 0.005964435962099043 ['ENSG00000136628|ENST00000366923|EPRS1'] 84887 6658 QEARPPLVSA True H1975_Epitope_Rep2 1066.5771078620598 1066.5760099358602 30.518 2 0.12043080211391599 0.0011731065327370042 0.005964444411796611 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 71223 18941 LYPEGLAQL True PC9_epitope_Rep6 1002.5385970950199 1002.53750993586 85.502 2 0.12043004804804959 0.0011731065327370042 0.005964547178586826 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 4296 23514 AIIEYMPLL True PC9_epitope_Rep1 1061.5831047592899 1061.58200993586 95.233 2 0.12042911671436785 0.0011731065327370042 0.0059646741064546755 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 109732 4331 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 21.773 2 0.12042620406583655 0.0011731065327370042 0.005965071077088135 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 49095 4285 KEIEQGDVTA True NCI_RA007_Epitope_Rep4 1088.5349682665599 1088.5338699358601 22.817 2 0.12041946520003803 0.0011731065327370042 0.005965989629340808 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19', 'SNX19|p.F516Lfs*6|1|0.1|ENSG00000120451|chr11:130914392-130914392|G/-|frameshift_variant'] 18134 13536 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59674993586 57.088 2 0.12040906289509985 0.0011731065327370042 0.005967407803883504 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 99265 19568 SHQLDFNVL True PC9_epitope_Rep1 1071.53490869691 1071.53380993586 80.093 2 0.12040599815968382 0.0011731065327370042 0.005967825690377135 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 140803 8619 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.4803699358602 38.146 2 0.12040060417360891 0.0011731065327370042 0.00596856124706491 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 45175 12550 IPQEAYNAV True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 56.095 2 0.12039735618496343 0.0011731065327370042 0.005969004205215288 ['ENSG00000198218|ENST00000395443|QRICH1'] 4301 23447 AIIEYMPLL True PC9_epitope_Rep5 1061.5831047592899 1061.58200993586 95.172 2 0.12039352624744123 0.0011731065327370042 0.005969526570340103 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 97842 11614 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42816496793 52.806 1 0.12038669735016239 0.0011731065327370042 0.0059704580742939205 ['ENSG00000126247|ENST00000246533|CAPNS1'] 74466 10801 NEVTDYAIA True H1975_Epitope_Rep2 994.46074069714 994.4596499358599 46.575 2 0.12038513015305433 0.0011731065327370042 0.005970671869724636 ['ENSG00000076003|ENST00000264156|MCM6'] 17377 9416 EHDPHVLLA True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 41.076 2 0.12038420605936109 0.0011731065327370042 0.00597079793714695 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 48173 10461 IYPPKLHQF True PC9_epitope_Rep6 1141.62841515893 1141.62676490379 50.992 3 0.12037512351886322 0.0011731065327370042 0.005972037140807553 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 26374 9504 FHTTPNTSL True PC9_epitope_Rep5 1016.49270953176 1016.49160993586 41.513 2 0.12037251186281257 0.0011731065327370042 0.00597239351642029 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 72314 22299 MIIENFEAL True PC9_epitope_Rep1 1078.53688284286 1078.53578993586 90.584 2 0.12037028870058855 0.0011731065327370042 0.0059726968961587405 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-6|RBM26', 'ENST00000472143.2_1_13:79951480-79979915:-|nuORF'] 125947 11166 VLDELTLAR True NCI_RA007_Epitope_Rep1 1028.5866099165999 1028.58550993586 47.432 2 0.12036823828543004 0.0011731065327370042 0.005972976715625879 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 41416 15827 HYGLPVVV True PC9_epitope_Rep6 882.49633836022 882.49524993586 73.142 2 0.12036731892059957 0.0011731065327370042 0.00597310218519147 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 89607 16108 QYPVYWDHLEF True NCI_RA007_Epitope_Rep3 1495.67721582615 1495.67610993586 71.061 2 0.12036176068805209 0.0011731065327370042 0.005973860795258257 ['ENSG00000090487|ENST00000204566|SPG21'] 1873 10894 AEIEELTASA True H1975_Epitope_Rep1 1032.4975201286798 1032.4969749679299 46.865 1 0.12036143834127767 0.0011731065327370042 0.005973904793336209 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 26435 12541 FIDASRLVY True H1975_Epitope_Rep3 1082.5760452329 1082.57494993586 53.438 2 0.12036013734100272 0.0011731065327370042 0.005974082373980961 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 120166 3817 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 19.7 2 0.12035620467316328 0.0011731065327370042 0.00597461919666682 ['ENSG00000155506|ENST00000518297|LARP1'] 88948 11885 QVHGTITGVDV True PC9_epitope_Rep5 1124.5825871653199 1124.5814899358602 50.714 2 0.12035557636907918 0.0011731065327370042 0.005974704966698698 ['ENSG00000167088|ENST00000300413|SNRPD1'] 38368 4415 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 22.09 2 0.12034751524103345 0.0011731065327370042 0.005975805501051223 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 94872 4192 RSYSDPPLK True NCI_RA007_Epitope_Rep4 1061.5505587610498 1061.54946993586 22.431 2 0.12034485951847058 0.0011731065327370042 0.005976168113243041 ['ENSG00000169813|ENST00000682386|HNRNPF'] 40207 9957 HQGPATTVAF True PC9_epitope_Rep2 1027.50869394907 1027.50758993586 43.63 2 0.12034478552088625 0.0011731065327370042 0.005976178217176185 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 97528 8801 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 38.819 1 0.12034338698593736 0.0011731065327370042 0.005976369182001122 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 116917 7519 TVFSHAQTV True PC9_epitope_Rep4 988.4977949121999 988.49668993586 36.289 2 0.12034330208856041 0.0011731065327370042 0.005976380774618814 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 20059 14795 EMDSPILGDY True H1975_Epitope_Rep3 1138.4852411928198 1138.4841499358602 62.287 2 0.12034289687336275 0.0011731065327370042 0.005976436106487921 ['ENSG00000182195|ENST00000370526|LDOC1'] 114729 14253 TQILSVPKV True PC9_epitope_Rep6 983.6015317047498 983.60042993586 66.715 2 0.12034278072808201 0.0011731065327370042 0.00597645196614196 ['nc|ENSG00000120802|P42166|TMPO'] 84925 12093 QEDVRLIGL True H1975_Epitope_Rep3 1041.5818588893299 1041.5807699358602 51.68 2 0.1203344599584823 0.0011731065327370042 0.005977588275305071 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 109625 8119 TEAGFPEQA True H1975_Epitope_Rep3 948.4188758851598 948.4183249679301 36.207 1 0.12033187233241101 0.0011731065327370042 0.00597794169225308 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 88572 12653 QTDIQGALSAY True H1975_Epitope_Rep3 1165.5615173675699 1165.56097496793 53.877 1 0.1203259135868075 0.0011731065327370042 0.005978755612962235 ['ENSG00000198730|ENST00000361367|CTR9'] 71090 16120 LYLGLFNRL True NCI_RA007_Epitope_Rep3 1107.6440652230701 1107.64296993586 71.108 2 0.12031924636869702 0.0011731065327370042 0.005979666434053516 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 72836 9395 MPNGDHIVSA True PC9_epitope_Rep3 1039.47567956863 1039.4745899358602 41.075 2 0.1203162917758329 0.0011731065327370042 0.005980070109811141 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 4163 15175 AHTPVIISV True PC9_epitope_Rep3 935.54401682863 935.54290993586 63.516 2 0.1203093883925164 0.0011731065327370042 0.005981013398802221 ['ENSG00000182993|ENST00000330828|C12orf60'] 66017 8994 LSEDYGVLK True NCI_RA007_Epitope_Rep1 1022.5284263341399 1022.5273299358599 38.987 2 0.12030519469538299 0.0011731065327370042 0.005981586503006062 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 40466 8113 HRDGALTQL True PC9_epitope_Rep1 1009.53049202281 1009.52938993586 36.033 2 0.12030222911144399 0.0011731065327370042 0.005981991807511692 ['ENSG00000127948|ENST00000461988|POR'] 137868 10404 YETDNNIVV True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 45.032 2 0.1203008045445647 0.0011731065327370042 0.005982186511711427 ['ENSG00000150787|ENST00000280362|PTS'] 93091 8582 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 37.847 2 0.12030014139862606 0.0011731065327370042 0.005982277150001386 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 27780 21182 FQAEIAQLM True PC9_epitope_Rep2 1049.52156713189 1049.52097496793 86.932 1 0.12029958445341342 0.0011731065327370042 0.0059823532738916205 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 27178 19295 FLLGPRLVLA True PC9_epitope_Rep6 1097.6961007959299 1097.69500993586 86.865 2 0.12029916708404051 0.0011731065327370042 0.00598241032102099 ['ENSG00000170348|ENST00000303575|TMED10'] 128738 5504 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 26.564 2 0.12029605763577007 0.0011731065327370042 0.0059828353452014 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 35858 13977 GTMEWIMIK True NCI_RA007_Epitope_Rep4 1107.54567370475 1107.5445699358602 61.035 2 0.12029129973925495 0.0011731065327370042 0.005983485749500197 ['ENSG00000168273|ENST00000477703|UQCC5'] 31591 9149 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep2 933.4113483570098 933.4107949679301 40.144 1 0.12028914396417523 0.0011731065327370042 0.005983780466608492 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 110950 19580 THADFVLEM True PC9_epitope_Rep1 1061.4851816231699 1061.48408993586 80.142 2 0.12028839104132968 0.0011731065327370042 0.005983883402413255 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 15207 5888 EADPGQYRC True PC9_epitope_Rep1 1037.42364399577 1037.4225499358602 27.465 2 0.12028602265520329 0.0011731065327370042 0.005984207207462746 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 73095 21825 MRFLAATFL True PC9_epitope_Rep5 1068.57902243836 1068.57792993586 88.982 2 0.12028306292056294 0.0011731065327370042 0.005984611885553739 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 13812 10197 DQLADLYK True NCI_RA007_Epitope_Rep1 964.4865615221601 964.48546993586 43.676 2 0.12028064575984727 0.0011731065327370042 0.0059849423985103845 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 23732 21063 EYFSYPVSL True PC9_epitope_Rep4 1103.51752729727 1103.5169749679299 89.178 1 0.12027024977478265 0.0011731065327370042 0.005986364107383016 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 27752 9555 FPSIVGRP True H1975_Epitope_Rep3 871.49158733295 871.49048993586 41.761 2 0.12026916730980451 0.0011731065327370042 0.005986512159451293 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTA1|p.H42L|1|0.34|ENSG00000143632|chr1:229432991-229432991|T/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 84875 5458 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 26.05 2 0.1202658328449232 0.0011731065327370042 0.00598696824694837 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 53464 15056 KRGDVIYIL True PC9_epitope_Rep2 1075.6389798426299 1075.6378899358601 63.171 2 0.1202628532165473 0.0011731065327370042 0.005987375828674479 ['ENSG00000005020|ENST00000345317|SKAP2'] 38210 7998 HEAESVLAV True H1975_Epitope_Rep3 953.4818104948898 953.48070993586 35.735 2 0.12026164990116925 0.0011731065327370042 0.005987540437202124 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 141317 12567 YTDSSSILNY True H1975_Epitope_Rep3 1161.51898384925 1161.51847496793 53.54 1 0.1202484599109087 0.0011731065327370042 0.005989345062561177 ['ENSG00000111647|ENST00000279907|BLTP3B'] 7325 10962 ARPPGYEF True PC9_epitope_Rep1 935.45011644379 935.44900993586 47.053 2 0.12024712107173403 0.0011731065327370042 0.005989528269265692 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 29525 16761 FVHDLVLYL True NCI_RA007_Epitope_Rep1 1117.6171817688898 1117.6160899358601 69.321 2 0.12024632330552042 0.0011731065327370042 0.005989637438167022 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 132195 17015 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 70.272 2 0.12024010387110007 0.0011731065327370042 0.0059904885922396345 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 34801 9385 GQHPNIITL True NCI_RA007_Epitope_Rep3 991.5450794577899 991.5439899358599 44.005 2 0.12023917061161869 0.0011731065327370042 0.005990616322660584 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 29320 16904 FVDEPLIHA True PC9_epitope_Rep3 1039.5338460677497 1039.53274993586 70.18 2 0.12022897138400675 0.0011731065327370042 0.005992012411764282 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 65365 9023 LRDQSAVVV True PC9_epitope_Rep3 985.5556441414899 985.55454993586 39.65 2 0.12022781288375292 0.0011731065327370042 0.005992171009505134 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 106698 8549 STTQVVGILK True NCI_RA007_Epitope_Rep5 1044.6179100448799 1044.6168099358601 39.567 2 0.12022410475430904 0.0011731065327370042 0.005992678676957593 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 55350 6021 LAELEQER True H1975_Epitope_Rep3 986.50327421546 986.50216993586 28.172 2 0.12022188962763264 0.0011731065327370042 0.00599298196248785 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 73656 23862 MYIDPDLLAEL True PC9_epitope_Rep3 1291.6369908069498 1291.6358899358602 97.072 2 0.12021812065235454 0.0011731065327370042 0.005993498028663935 ['ENSG00000104611|ENST00000265807|SH2D4A'] 130652 9674 VSTEVDARL True PC9_epitope_Rep2 988.5189242795998 988.51782993586 42.549 2 0.12021776172322264 0.0011731065327370042 0.005993547177225085 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 100968 20414 SLFPGKLEVV True PC9_epitope_Rep1 1087.62774645259 1087.62664993586 83.335 2 0.12021665019651265 0.0011731065327370042 0.005993699382297075 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 9815 11889 AYLEAIHNF True NCI_RA007_Epitope_Rep4 1076.52909504048 1076.5279899358602 52.727 2 0.12021185607622581 0.0011731065327370042 0.00599435590046873 ['ENSG00000042753|ENST00000263270|AP2S1'] 21707 16985 ERSPLDQVL True PC9_epitope_Rep2 1055.56112344475 1055.56002993586 70.58 2 0.12021037894267617 0.0011731065327370042 0.00599455819677853 ['ENSG00000168994|ENST00000380283|PXDC1'] 104412 18177 SQLEDAIRL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 75.123 2 0.12021034018618212 0.0011731065327370042 0.005994563504645427 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 115002 8988 TRAGPGTLSV True PC9_epitope_Rep1 957.52434401321 957.52324993586 39.418 2 0.12020827680570166 0.0011731065327370042 0.00599484610001367 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 105092 12867 SREDSTMIL True PC9_epitope_Rep3 1050.5015599633 1050.50046993586 54.512 2 0.1201955231855178 0.0011731065327370042 0.005996593092209462 ['ENSG00000071894|ENST00000616140|CPSF1'] 76577 14076 NQLEGKWAV True PC9_epitope_Rep5 1043.53999407735 1043.5388899358602 59.157 2 0.12018656326312749 0.0011731065327370042 0.005997820720522968 ['ENSG00000204946|ENST00000434415|ZNF783', 'ZNF746|p.E82Rfs*43|1|0.24|ENSG00000181220|chr7:149494284-149494284|C/-|frameshift_variant', 'nc|ENSG00000291118|Q75MW2-2|ZNF767P', 'ENST00000472212.5_1_7:149318233-149321683:-|nuORF', 'ENST00000483892.5_1_7:148845372-148863263:+|nuORF', 'nc|ENSG00000291118|Q75MW2|ZNF767P', 'ENST00000463567.5_1_7:149255903-149321683:-|nuORF', 'nc|ENSG00000204946|Q6ZMS7-1|ZNF783', 'ENSG00000197024|ENST00000475153|ZNF398', 'nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'ZNF746|p.C265Afs*6|1|0.13|ENSG00000181220|chr7:149476968-149476968|T/-|frameshift_variant'] 14965 12692 DYFEQYGK True PC9_epitope_Rep2 1048.4501760134401 1048.44906993586 54.127 2 0.12018491063844433 0.0011731065327370042 0.005998047178842843 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 28195 14624 FREDSTLAL True PC9_epitope_Rep2 1050.53457434374 1050.53346993586 61.519 2 0.12018392484869948 0.0011731065327370042 0.00599818226508482 ['ENSG00000197077|ENST00000358431|KIAA1671'] 28796 19127 FSVDDVQTV True PC9_epitope_Rep3 1008.4763907612801 1008.47528993586 78.794 2 0.12017982790121715 0.0011731065327370042 0.005998743716056036 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 117519 5200 TVRSSTSSI True PC9_epitope_Rep2 936.48762415132 936.48652993586 25.388 2 0.12017172044311936 0.0011731065327370042 0.00599985492380359 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 77904 21972 NVIESFTEL True PC9_epitope_Rep5 1050.5233409537 1050.5222499358601 89.548 2 0.1201703172642582 0.0011731065327370042 0.00600004726381672 ['nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'ENSG00000197562|ENST00000248139|RAB40C'] 89716 10125 RADDTFEAL True NCI_RA007_Epitope_Rep1 1036.48253877088 1036.4814499358602 43.395 2 0.12016909023193885 0.0011731065327370042 0.006000215463567528 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 138517 9812 YHSSGGLEL True PC9_epitope_Rep4 961.4505103666099 961.44940993586 45.384 2 0.12016861429879627 0.0011731065327370042 0.006000280705008159 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 73198 14252 MRYVASYL True PC9_epitope_Rep6 1001.5004377644898 1001.49934993586 66.711 2 0.12016318235104406 0.0011731065327370042 0.006001025371461626 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 108121 18653 SYDPDFNQL True PC9_epitope_Rep4 1097.46655435357 1097.46597496793 79.825 1 0.1201535114768645 0.0011731065327370042 0.0060023513762178515 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 22191 8610 ESVFTVEGGHR True PC9_epitope_Rep5 1216.58364979448 1216.5820049037902 38.062 3 0.1201460040959602 0.0011731065327370042 0.006003380934632909 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000542294.1_1_12:7079357-7079730:-|nuORF', 'ENST00000544134.5_1_12:7077746-7079730:-|nuORF'] 84855 10836 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 46.709 1 0.12013477740740434 0.0011731065327370042 0.006004920878686124 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 71327 19150 LYQHEINLF True PC9_epitope_Rep2 1175.5975089534697 1175.59640993586 79.031 2 0.12013205678261885 0.0011731065327370042 0.006005294119786705 ['ENSG00000115816|ENST00000234170|CEBPZ'] 9162 8305 AVLEADFAK True NCI_RA007_Epitope_Rep3 962.5072969667399 962.50618993586 39.787 2 0.12013109458569292 0.0011731065327370042 0.0060054261285040125 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 120114 5420 VEAAAELSAK True NCI_RA007_Epitope_Rep1 987.5236753068699 987.52256993586 25.155 2 0.1201308318278851 0.0011731065327370042 0.006005462178083915 ['ENSG00000159335|ENST00000309083|PTMS'] 39697 3498 HLSLSHNPEQK True NCI_RA007_Epitope_Rep2 1288.65239806064 1288.65076490379 18.258 3 0.12013079954220784 0.0011731065327370042 0.0060054666075961705 ['ENSG00000100714|ENST00000652337|MTHFD1'] 101809 12963 SLPEELQKC True PC9_epitope_Rep3 1045.51139637101 1045.51028993586 54.887 2 0.1201301659697364 0.0011731065327370042 0.006005553532762555 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 119351 9498 VAPEEHPVLL True H1975_Epitope_Rep1 1102.60225998074 1102.60116993586 41.454 2 0.12012916455001922 0.0011731065327370042 0.0060056909285089105 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 88718 11461 QTHSVFVNV True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 51.848 2 0.12012664312734579 0.0011731065327370042 0.0060060368837095155 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 53317 15404 KQLSDTSIIAV True PC9_epitope_Rep2 1173.6605031328502 1173.6594099358601 64.532 2 0.12011987666860353 0.0011731065327370042 0.006006965380970018 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 99175 4652 SHITPSTQQHL True PC9_epitope_Rep2 1247.62584895963 1247.62420490379 23.266 3 0.12011953465879577 0.0011731065327370042 0.006007012315467544 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 77024 17143 NRIGSSLYAL True PC9_epitope_Rep5 1092.5927579262 1092.5916699358602 70.961 2 0.12011354524258516 0.0011731065327370042 0.006007834309694189 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 9274 7106 AVPTNIIAAK True NCI_RA007_Epitope_Rep3 996.5967806774798 996.59568993586 35.067 2 0.12011042633676035 0.0011731065327370042 0.0060082623953176695 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 93381 11881 RQAELTVQV True PC9_epitope_Rep3 1042.57710786206 1042.5760099358602 50.717 2 0.12010341085751404 0.0011731065327370042 0.00600922541420064 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 19453 7400 ELNITAAK True PC9_epitope_Rep5 858.4810822188999 858.47998993586 33.421 2 0.12010203117723255 0.0011731065327370042 0.006009414821438065 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 108593 22934 SYPDLLPTF True PC9_epitope_Rep1 1051.52261267771 1051.5215099358602 93.016 2 0.12010186814852643 0.0011731065327370042 0.006009437202962565 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 134095 18572 VYKTIMEQF True PC9_epitope_Rep1 1157.57908200801 1157.5779899358602 76.224 2 0.12009357313484784 0.0011731065327370042 0.006010576097863377 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 8053 7330 ATDPTIHTV True PC9_epitope_Rep5 953.4818104948899 953.48070993586 33.154 2 0.12009355818705453 0.0011731065327370042 0.006010578150366688 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 93631 4581 RQQKEITAL True NCI_RA007_Epitope_Rep4 1085.61930702721 1085.61820993586 24.025 2 0.12007805437035343 0.0011731065327370042 0.006012707370472965 ['ENST00000604202.1_1_6:26373162-26373348:+|nuORF', 'ENST00000531055.1_1_6:26370743-26373574:+|nuORF', 'nc|ENSG00000186470|P78410-3|BTN3A2', 'nc|ENSG00000186470|P78410-2|BTN3A2', 'ENSG00000186470|ENST00000377708|BTN3A2'] 140801 8913 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 39.249 2 0.12007699099453471 0.0011731065327370042 0.006012853436405802 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 77318 13389 NSDPNLHLL True PC9_epitope_Rep6 1021.5192586327701 1021.51816993586 63.171 2 0.12007669126900412 0.0011731065327370042 0.006012894607508102 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 38846 4520 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 23.875 2 0.12006422182684906 0.0011731065327370042 0.006014607687394751 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 41588 10625 IAAPFTSKL True H1975_Epitope_Rep2 946.5487678559 946.54766993586 45.892 2 0.12006123379782527 0.0011731065327370042 0.00601501826026732 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19758004-19758388:-|nuORF'] 44655 17607 ILSKDGVLYV True PC9_epitope_Rep5 1105.63831113629 1105.63720993586 72.734 2 0.12006119075322251 0.0011731065327370042 0.006015024175050385 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 72237 21037 MHFLENISL True PC9_epitope_Rep5 1102.5481162329 1102.5470099358602 85.978 2 0.12005772441548378 0.0011731065327370042 0.006015500505106026 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 93392 8376 RQAPIPAEL True NCI_RA007_Epitope_Rep5 993.5607295219298 993.55962993586 38.892 2 0.12005377286781636 0.0011731065327370042 0.006016043555651872 ['ENSG00000169583|ENST00000494426|CLIC3'] 108116 19358 SYDPDFNQL True PC9_epitope_Rep2 1097.46655435357 1097.46544993586 79.836 2 0.12005334164636987 0.0011731065327370042 0.006016102820148989 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 23086 16368 EVIKELAQI True PC9_epitope_Rep4 1041.6070110080097 1041.6059099358602 70.922 2 0.12004239512214614 0.0011731065327370042 0.0060176074358455145 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 35446 3547 GSGTAEVELKK True NCI_RA007_Epitope_Rep2 1117.59790287629 1117.5968099358602 18.448 2 0.1200400399010229 0.0011731065327370042 0.006017931212433025 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 105118 13294 SREPSQVIF True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 56.147 2 0.12003923520637895 0.0011731065327370042 0.0060180418391858675 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 3278 5117 AGFAGDDAPR True PC9_epitope_Rep4 975.4410083120698 975.43990993586 26.339 2 0.12003505702408557 0.0011731065327370042 0.006018616273753292 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 104068 12955 SQDPTM[Oxidation]IGV True PC9_epitope_Rep5 962.43789745802 962.43678993586 54.841 2 0.12003197223110039 0.0011731065327370042 0.006019040418775564 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 71655 15158 M[Oxidation]EALPLLAA True H1975_Epitope_Rep1 943.5048548190299 943.50430496793 63.565 1 0.12002337761362862 0.0011731065327370042 0.006020222293526262 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 38354 9269 HEIEVETIP True NCI_RA007_Epitope_Rep5 1065.53423999057 1065.5331499358601 42.3 2 0.12002263455358766 0.0011731065327370042 0.006020324484849406 ['ENSG00000100811|ENST00000262238|YY1'] 74954 16719 NHM[Oxidation]AVAFVL True PC9_epitope_Rep2 1016.5113371818 1016.51022993586 69.559 2 0.12002122788965201 0.0011731065327370042 0.006020517944712974 ['ENSG00000164919|ENST00000520468|COX6C'] 39748 17170 HLVPEVPTV True PC9_epitope_Rep1 989.55458151233 989.55348993586 70.864 2 0.1200197502127258 0.0011731065327370042 0.006020721177597815 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 125056 9486 VIDQQNGLY True H1975_Epitope_Rep2 1048.5189242795998 1048.51837496793 41.457 1 0.12001686408000224 0.0011731065327370042 0.006021118142324787 ['ENSG00000132383|ENST00000254719|RPA1'] 141959 19167 YVIEDDVNM True PC9_epitope_Rep5 1096.47467650912 1096.47417496793 78.764 1 0.12001439702054029 0.0011731065327370042 0.0060214574870918625 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 30448 8634 GAFGKPSSL True PC9_epitope_Rep2 862.45486747106 862.45376993586 38.576 2 0.1200114964487928 0.0011731065327370042 0.006021856485480271 ['ENSG00000099812|ENST00000215582|MISP'] 110839 20504 TGPTRFFLF True PC9_epitope_Rep4 1084.5705659296398 1084.56946993586 87.018 2 0.12001026422880708 0.0011731065327370042 0.006022025995661453 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 88281 14425 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.4842749679299 60.64 1 0.12000985670465007 0.0011731065327370042 0.0060220820576936855 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 8207 9421 ATFPLSVQK True NCI_RA007_Epitope_Rep2 989.55458151233 989.55348993586 41.257 2 0.12000931579318602 0.0011731065327370042 0.006022156470255662 ['ENSG00000110367|ENST00000534980|DDX6'] 25618 5437 FENERAVTP True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 25.972 2 0.12000020002702635 0.0011731065327370042 0.006023410650641282 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 96159 14371 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65458993586 60.539 2 0.11999585453219681 0.0011731065327370042 0.006024008609415176 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 64764 10261 LQAEIEGLK True PC9_epitope_Rep6 999.5600608155898 999.55896993586 50.146 2 0.11999344187576784 0.0011731065327370042 0.006024340626328635 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'KRT8|p.G326V|1|0.47|ENSG00000170421|chr12:52899779-52899779|C/A|missense_variant', 'CON__H-INV:HIT000292931'] 2970 14217 AFFSEVER True PC9_epitope_Rep1 983.4712458111899 983.47014993586 59.508 2 0.11998924724687483 0.0011731065327370042 0.00602491791131369 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000552266.1_1_12:56504402-56504480:+|nuORF'] 84908 6172 QEDDRQLIA True H1975_Epitope_Rep3 1086.53055159246 1086.5294499358602 28.751 2 0.11996937040875295 0.0011731065327370042 0.006027654191522471 ['ENSG00000137628|ENST00000393743|DDX60'] 115749 15420 TSDDPWLTAY True H1975_Epitope_Rep1 1167.5084191655499 1167.5078749679299 64.582 1 0.11996584081827304 0.0011731065327370042 0.006028140207906712 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 1130 6377 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.4125149679301 29.456 1 0.11995738147555418 0.0011731065327370042 0.006029305195383313 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 124858 15101 VHLDSAVAL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 63.092 2 0.11995433127041104 0.0011731065327370042 0.006029725311564416 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 99868 14074 SILPAIFQK True NCI_RA007_Epitope_Rep4 1015.6066170851899 1015.60552993586 61.419 2 0.11994728102043997 0.0011731065327370042 0.006030696478252223 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 96648 8723 SAINEVVTR True PC9_epitope_Rep1 987.53490869691 987.53380993586 38.39 2 0.11994228548131784 0.0011731065327370042 0.006031384702461012 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 1427 14554 AEEFPNLAV True H1975_Epitope_Rep1 988.4865615221598 988.48601496793 61.187 1 0.1199398059312383 0.0011731065327370042 0.006031726332975366 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 116402 17446 TTILQLHEI True PC9_epitope_Rep4 1066.6022599807402 1066.60116993586 75.101 2 0.11993907342314311 0.0011731065327370042 0.006031827260994601 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 77181 8482 NRSDPVTL True PC9_epitope_Rep1 900.46649478392 900.46538993586 37.462 2 0.11993873453089755 0.0011731065327370042 0.0060318739555387585 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 29021 11330 FTEPNEISQY True H1975_Epitope_Rep2 1226.54553295026 1226.5449749679299 48.629 1 0.11993688714909576 0.0011731065327370042 0.0060321285047492445 ['ENSG00000143155|ENST00000367833|TIPRL'] 7333 10959 ARPPGYEF True PC9_epitope_Rep5 935.45011644379 935.44900993586 47.143 2 0.1199319876850627 0.0011731065327370042 0.006032803648623069 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 91008 6640 RFEEKHAYF True PC9_epitope_Rep4 1225.5880068989297 1225.58635490379 32.708 3 0.11992198155347097 0.0011731065327370042 0.0060341827180519 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 111119 13914 THEEGSYLF True PC9_epitope_Rep2 1081.47163973401 1081.4705499358602 58.799 2 0.11991315819876665 0.0011731065327370042 0.0060353990295667495 ['ENSG00000182827|ENST00000366812|ACBD3'] 141637 15087 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.4906099358602 63.428 2 0.11991049840107781 0.0011731065327370042 0.006035765733253285 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 5226 22968 ALPEIFTEL True PC9_epitope_Rep2 1031.55391280599 1031.55337496793 93.839 1 0.11990481426065339 0.0011731065327370042 0.006036549472986965 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 115569 13452 TRSSLEVEL True PC9_epitope_Rep2 1032.5451390274397 1032.5440499358601 57.022 2 0.11990102077500565 0.0011731065327370042 0.006037072581026164 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'nc|ENSG00000257923|P39880-4|CUX1', 'ENSG00000257923|ENST00000292535|CUX1', 'nc|ENSG00000257923|P39880-2|CUX1', 'nc|ENSG00000257923|P39880-5|CUX1', 'nc|ENSG00000257923|P39880-3|CUX1', 'nc|ENSG00000257923|P39880-6|CUX1'] 137082 19490 YAQGLLTGV True PC9_epitope_Rep2 920.4967322830399 920.49562993586 80.35 2 0.11988315186346142 0.0011731065327370042 0.006039537234805055 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 9745 12822 AYHELAQVY True PC9_epitope_Rep5 1092.5240096600398 1092.52290993586 54.329 2 0.1198765989160612 0.0011731065327370042 0.006040441327016768 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3'] 84904 6093 QEDAQRLYQA True H1975_Epitope_Rep2 1220.57856441404 1220.57746993586 28.413 2 0.11986932960801777 0.0011731065327370042 0.006041444408080887 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 141887 13267 YVDPVNKVL True PC9_epitope_Rep6 1045.58079626017 1045.5796899358602 62.683 2 0.11986110844839849 0.0011731065327370042 0.006042579029629927 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 25738 7035 FESSGIHVA True H1975_Epitope_Rep3 945.45559574705 945.45448993586 32.025 2 0.11986034984973344 0.0011731065327370042 0.006042683736093203 ['ENSG00000084774|ENST00000264705|CAD'] 79251 6129 PAPPPPPPP True NCI_RA007_Epitope_Rep5 865.46978925921 865.46868993586 30.255 2 0.11985806451174014 0.0011731065327370042 0.006042999183231114 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 1415 8234 AEEFKVPAA True H1975_Epitope_Rep1 960.4916469025998 960.49109496793 36.616 1 0.1198542807873279 0.0011731065327370042 0.006043521489246919 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 33274 10420 GKKIYEFTL True NCI_RA007_Epitope_Rep4 1097.61209638845 1097.61098993586 46.934 2 0.1198542397469246 0.0011731065327370042 0.006043527154713283 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 128945 20135 VQIGDIVTV True PC9_epitope_Rep4 942.5385970950199 942.5380449679301 85.585 1 0.11985073687122785 0.0011731065327370042 0.006044010732037045 ['ENSG00000142534|ENST00000270625|RPS11'] 99031 5820 SHEEIAM[Oxidation]ATVT True NCI_RA007_Epitope_Rep1 1203.54415343171 1203.5430499358602 26.692 2 0.11984878925311522 0.0011731065327370042 0.006044279620018312 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 59582 9077 LFVGGIKEDTE True NCI_RA007_Epitope_Rep3 1206.61321858726 1206.6121299358601 42.793 2 0.11984722649488576 0.0011731065327370042 0.006044495382720863 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 52524 11951 KLEATINELV True H1975_Epitope_Rep1 1128.63903941228 1128.6379499358602 50.973 2 0.11984350885788723 0.0011731065327370042 0.006045008689643692 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 99348 17104 SHSVFSVTI True PC9_epitope_Rep4 975.50254593947 975.50144993586 73.795 2 0.11982980739199876 0.0011731065327370042 0.006046900865496531 ['ENSG00000138160|ENST00000260731|KIF11'] 131162 10793 VTEIM[Oxidation]SMGY True H1975_Epitope_Rep2 1045.44601961357 1045.44492993586 46.543 2 0.11982799672956276 0.0011731065327370042 0.006047150961666621 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 52854 10123 KPANVFITA True PC9_epitope_Rep6 959.54401682863 959.54290993586 49.552 2 0.11982499542944411 0.0011731065327370042 0.006047565535863026 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 95727 14057 RYGLVTNEI True PC9_epitope_Rep2 1063.56620882519 1063.5651099358602 59.348 2 0.11982493396668335 0.0011731065327370042 0.006047574026098428 ['ENSG00000115267|ENST00000649979|IFIH1'] 65285 17739 LQWNGKEFTA True PC9_epitope_Rep3 1192.58767254576 1192.58656993586 73.43 2 0.11982253217018618 0.0011731065327370042 0.0060479058103732955 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 134448 12887 VYPPPHQVF True PC9_epitope_Rep1 1082.5549158654999 1082.55380993586 54.444 2 0.11981391853805733 0.0011731065327370042 0.006049095843998474 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 118898 9593 VADGYPVRL True NCI_RA007_Epitope_Rep5 988.5341804209199 988.53308993586 43.542 2 0.11980841119020684 0.0011731065327370042 0.006049856842450396 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 26403 16329 FHYEADGANVL True PC9_epitope_Rep5 1234.5618517207397 1234.56074993586 67.806 2 0.1198073893306174 0.0011731065327370042 0.006049998052008681 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 47296 17340 IVDPSLIHV True PC9_epitope_Rep4 991.5702315764701 991.56912993586 74.703 2 0.11979821524385156 0.0011731065327370042 0.006051265952197882 ['ENST00000488971.1_1_2:86683605-86693535:+|nuORF', 'ENSG00000115548|ENST00000312912|KDM3A', 'KDM3A|p.I669Wfs*37|1|0.17|ENSG00000115548|chr2:86477942-86477973|ATCTTCAACCTGCACTGGGTGTGTCCTCGGTG/-|frameshift_variant'] 11762 14981 DHDGNIVEL True PC9_epitope_Rep5 1010.46688870674 1010.46637496793 62.628 1 0.11979638565856073 0.0011731065327370042 0.00605151884015327 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 92886 12758 RPFQSLIHA True PC9_epitope_Rep1 1067.58761297611 1067.58650993586 53.947 2 0.1197960612281294 0.0011731065327370042 0.006051563684478673 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 29405 21462 FVDPVLNQL True PC9_epitope_Rep3 1043.56514619603 1043.56404993586 87.845 2 0.11979482191548643 0.0011731065327370042 0.006051734991183268 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 136984 15887 YAITTLHNL True PC9_epitope_Rep2 1044.5603951687601 1044.55928993586 66.363 2 0.11979181776443842 0.0011731065327370042 0.006052150266182039 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant', 'ENSG00000173801|ENST00000393931|JUP'] 114762 5610 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 29.06 2 0.119790575762598 0.0011731065327370042 0.0060523219608517986 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 6378 5618 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 26.612 2 0.11978984768367486 0.0011731065327370042 0.006052422612888727 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 43857 11359 IHSSETLTL True PC9_epitope_Rep2 999.52367530687 999.52256993586 49.014 2 0.11978921546285523 0.0011731065327370042 0.0060525100145096536 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 90857 8776 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 38.721 2 0.11978666564004825 0.0011731065327370042 0.006052862528288539 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 15101 18635 DYVEGLRVF True PC9_epitope_Rep6 1096.5553097883198 1096.5542099358602 84.322 2 0.11978635090190085 0.0011731065327370042 0.006052906042322393 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 116666 8950 TVAVPLVGK True NCI_RA007_Epitope_Rep1 882.5538532363399 882.55274993586 38.813 2 0.11978541140277933 0.0011731065327370042 0.006053035934324348 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 22468 16302 ETEYSFLDY True H1975_Epitope_Rep2 1165.4815357113698 1165.48097496793 67.924 1 0.11978449712600264 0.0011731065327370042 0.0060531623417810305 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 77825 15439 NVDFDAPLGY True H1975_Epitope_Rep3 1109.5029398622898 1109.5023749679299 64.8 1 0.11977975046077434 0.0011731065327370042 0.006053818654784124 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 22364 10687 ETEDVNLAY True H1975_Epitope_Rep1 1052.4662200004 1052.4651299358602 46.066 2 0.1197774174571178 0.0011731065327370042 0.006054141260525823 ['ENSG00000153767|ENST00000283875|GTF2E1'] 120367 11507 VEEGFSIQA True H1975_Epitope_Rep3 978.4658260775799 978.4652749679301 49.386 1 0.11977185001469645 0.0011731065327370042 0.006054911189472263 ['ENSG00000172409|ENST00000533682|CLP1'] 9736 21539 AYGSLFNTI True PC9_epitope_Rep5 984.4916469026 984.49054993586 87.886 2 0.11976496016954798 0.0011731065327370042 0.006055864127527615 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 98064 8531 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 37.769 1 0.11976454194621805 0.0011731065327370042 0.006055921976924723 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 104690 9296 SQTTVYEKL True PC9_epitope_Rep2 1067.54989005471 1067.5487899358602 41.097 2 0.11976309897065715 0.0011731065327370042 0.006056121576018803 ['ENSG00000118193|ENST00000367350|KIF14'] 36023 17318 GTYTGFIKV True PC9_epitope_Rep1 984.5280324113198 984.52692993586 71.429 2 0.11975914694729822 0.0011731065327370042 0.0060566682711494955 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 24557 17019 FAGMPITL True H1975_Epitope_Rep1 848.44661128648 848.44606496793 70.887 1 0.119758967999948 0.0011731065327370042 0.006056693026607695 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 38 17028 AAAAVIPTV True PC9_epitope_Rep2 811.48035394291 811.47924993586 70.749 2 0.11975666799102044 0.0011731065327370042 0.0060570112171138245 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 97505 4883 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 23.867 2 0.11975522561925203 0.0011731065327370042 0.006057210767706743 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 88965 16339 QVIEKFEAL True PC9_epitope_Rep2 1075.5913609438699 1075.59026993586 68.094 2 0.11974850437473829 0.0011731065327370042 0.006058140729309255 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 133338 19150 VVVDPIQSV True PC9_epitope_Rep1 954.53859709502 954.53750993586 78.454 2 0.11974810570290008 0.0011731065327370042 0.006058195894527581 ['ENSG00000115233|ENST00000409682|PSMD14'] 36696 23349 GVISGLFEL True PC9_epitope_Rep5 933.5171333744499 933.51658496793 94.794 1 0.11974764252598327 0.0011731065327370042 0.006058259986090389 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 105093 12706 SREDSTMIL True PC9_epitope_Rep5 1050.5015599633 1050.50046993586 53.879 2 0.1197430219296739 0.0011731065327370042 0.006058899391913057 ['ENSG00000071894|ENST00000616140|CPSF1'] 89395 23399 QYAPLLAVF True PC9_epitope_Rep1 1020.5644179200399 1020.56387496793 94.788 1 0.11973374109325036 0.0011731065327370042 0.006060183888520868 ['ENSG00000136261|ENST00000258761|BZW2'] 108466 17632 SYLTSASSL True PC9_epitope_Rep1 927.45492704071 927.4543749679301 72.614 1 0.11972450825204939 0.0011731065327370042 0.006061462006119442 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 134389 19391 VYPGDPLRF True PC9_epitope_Rep1 1062.5498304850598 1062.5487299358601 79.399 2 0.11972350141526678 0.0011731065327370042 0.006061601400119288 ['ENSG00000170892|ENST00000396388|TSEN34'] 87169 9579 QPFSKPVSV True PC9_epitope_Rep4 987.5389314481899 987.53782993586 44.466 2 0.11972019310276608 0.0011731065327370042 0.006062059449623923 ['nc|ENSG00000285253|Q6N043-6|ZNF280D'] 21712 15373 ERSPLDQVL True PC9_epitope_Rep6 1055.56112344475 1055.56002993586 71.279 2 0.11971931613320598 0.0011731065327370042 0.006062180875338252 ['ENSG00000168994|ENST00000380283|PXDC1'] 55036 8355 KYSLIKGNF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 38.95 2 0.11970245861758774 0.0011731065327370042 0.0060645154380937205 ['ENSG00000143546|ENST00000368733|S100A8'] 3999 18230 AHEGSIFAL True PC9_epitope_Rep5 943.4763311916299 943.4752299358599 75.133 2 0.1196981597351411 0.0011731065327370042 0.006065110921879699 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 88491 22028 QSVDLVFPV True PC9_epitope_Rep2 1002.5385970950199 1002.53750993586 90.203 2 0.11969611755854671 0.0011731065327370042 0.006065393825401888 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 110908 6748 TGVPDRFTG True NCI_RA007_Epitope_Rep4 948.46649478392 948.46538993586 32.576 2 0.11969598681570982 0.0011731065327370042 0.006065411937696786 ['CON__Q05B55'] 1034 6216 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.4179949679301 28.879 1 0.11969370046642175 0.0011731065327370042 0.006065728682758836 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 99130 13413 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 56.873 2 0.1196919463922096 0.0011731065327370042 0.006065971698716405 ['ENSG00000132646|ENST00000379143|PCNA'] 63536 13927 LMAEMGVHSV True PC9_epitope_Rep1 1072.50453716876 1072.5034299358601 58.405 2 0.1196909735059974 0.0011731065327370042 0.006066106490082462 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000358711.7_1_20:62571331-62572425:-|nuORF'] 104200 11978 SQFSGKITV True PC9_epitope_Rep1 965.51819600361 965.51708993586 50.935 2 0.11968768961329004 0.0011731065327370042 0.006066561488186262 ['ENSG00000075568|ENST00000186436|TMEM131'] 97584 7819 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 35.054 2 0.1196797017488542 0.0011731065327370042 0.006067668381756331 ['nc|ENSG00000128951|P33316-2|DUT'] 47423 22176 IVLPEDLQL True PC9_epitope_Rep3 1038.5961119711399 1038.5950099358602 90.585 2 0.11967126399223692 0.0011731065327370042 0.0060688378317774435 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 85025 11194 QEHPVVLLP True H1975_Epitope_Rep2 1030.5811306133398 1030.58002993586 48.097 2 0.11967035419450422 0.0011731065327370042 0.006068963940393336 ['nc|ENSG00000116906|O15228-2|GNPAT', 'ENSG00000116906|ENST00000366647|GNPAT'] 14890 16577 DWYDVKAPAMF True NCI_RA007_Epitope_Rep3 1341.6063593850097 1341.6052699358602 72.992 2 0.11966689263162947 0.0011731065327370042 0.006069443776902139 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000493479.1_1_4:153472952-153473506:-|nuORF', 'ENST00000507485.1_1_4:152020792-152024033:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 44033 19287 IIIPEIQKV True PC9_epitope_Rep3 1051.66413196131 1051.66302993586 79.409 2 0.11966436689202518 0.0011731065327370042 0.00606979391439179 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 46903 10911 ITLTGVHQV True PC9_epitope_Rep4 966.5498304850602 966.54872993586 49.738 2 0.11964938954898825 0.0011731065327370042 0.006071870594118947 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF'] 128788 18546 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 76.36 2 0.11964121406077016 0.0011731065327370042 0.006073004456866588 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 69551 13531 LVDDPLEY True H1975_Epitope_Rep3 962.4596780679799 962.45912496793 57.326 1 0.11963985281090436 0.0011731065327370042 0.0060731932693874665 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 111467 12060 THTTPVLL True PC9_epitope_Rep5 880.5018176634799 880.50072993586 51.384 2 0.11963810774748077 0.0011731065327370042 0.006073435327247149 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 87194 21024 QPILLELEA True PC9_epitope_Rep4 1024.580461907 1024.57987496793 89.031 1 0.1196379802911826 0.0011731065327370042 0.006073453007087348 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 48970 12190 KEETPLFLAA True H1975_Epitope_Rep2 1117.60192562757 1117.60082993586 51.97 2 0.11963667488486938 0.0011731065327370042 0.006073634086750263 ['ENSG00000134250|ENST00000256646|NOTCH2', 'ENSG00000074181|ENST00000263388|NOTCH3'] 7374 11444 ARSELLTTV True PC9_epitope_Rep2 988.55530978832 988.55420993586 49.34 2 0.11963136929800815 0.0011731065327370042 0.00607437010636818 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 138865 13735 YKDGTELEL True PC9_epitope_Rep5 1066.51825557326 1066.51767496793 57.854 1 0.1196251004343313 0.0011731065327370042 0.006075239869107096 ['ENSG00000143815|ENST00000272163|LBR'] 74803 11225 NHDTGEYVL True PC9_epitope_Rep3 1046.46688870674 1046.4657899358601 48.185 2 0.11962241316604354 0.0011731065327370042 0.006075612746745868 ['ENSG00000144597|ENST00000396842|EAF1'] 106183 4901 STDPSVLGK True NCI_RA007_Epitope_Rep4 902.4709114580199 902.46980993586 25.308 2 0.11962173592990621 0.0011731065327370042 0.0060757067216125026 ['ENSG00000114315|ENST00000232424|HES1'] 32159 8645 GEVLDPTAA True H1975_Epitope_Rep2 871.4287122928699 871.42816496793 38.211 1 0.11961687834574672 0.0011731065327370042 0.006076380812896415 ['ENSG00000140688|ENST00000327237|RUSF1', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 34764 9698 GQFQGRPVSV True PC9_epitope_Rep3 1073.5617921510898 1073.5606899358602 42.255 2 0.11961412756273389 0.0011731065327370042 0.006076762573869936 ['ENSG00000261150|ENST00000615648|EPPK1'] 2813 4579 AEVDAAM[Oxidation]AA True NCI_RA007_Epitope_Rep4 863.3694835450299 863.36893496793 24.018 1 0.11961244468980327 0.0011731065327370042 0.006076996138983749 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 33365 13947 GKVQIPIML True NCI_RA007_Epitope_Rep4 997.5994235297699 997.59832993586 60.923 2 0.11960286764928603 0.0011731065327370042 0.006078325498545575 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 121853 16149 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 67.263 2 0.11960083396067288 0.0011731065327370042 0.006078607825133773 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 40452 17226 HRDDELYIL True PC9_epitope_Rep5 1172.5825871653199 1172.5814899358602 71.277 2 0.11959897956878482 0.0011731065327370042 0.006078865272027537 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 140040 16447 YQFGEIRTI True PC9_epitope_Rep6 1125.5818588893299 1125.5807699358602 75.673 2 0.11959826001271913 0.0011731065327370042 0.006078965171508355 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 100098 7862 SISETYDLK True NCI_RA007_Epitope_Rep1 1054.5182555732597 1054.51714993586 34.573 2 0.11959441589600192 0.0011731065327370042 0.006079498896134645 ['CON__P34955'] 88583 13921 QTDNIIYVY True H1975_Epitope_Rep1 1127.5498900547097 1127.54937496793 58.699 1 0.11958486465004661 0.0011731065327370042 0.006080825207604067 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 76776 9718 NRAAAQYYL True PC9_epitope_Rep6 1068.53524305008 1068.5341499358601 47.783 2 0.11958082016016264 0.0011731065327370042 0.0060813869213318765 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 140518 12491 YRMDGHIQL True PC9_epitope_Rep2 1131.5495132152298 1131.54787490379 53.355 3 0.11957566510660676 0.0011731065327370042 0.006082102947643073 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 90599 15635 REMFIWAVA True H1975_Epitope_Rep2 1121.56918603065 1121.5680899358601 65.294 2 0.11957183405923542 0.0011731065327370042 0.006082635125504491 ['ENST00000346128.10_1_15:30114303-30114552:-|nuORF'] 142677 15026 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 62.926 2 0.11956938009075377 0.0011731065327370042 0.006082976034667283 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 10049 13388 AYSRVQYQF True PC9_epitope_Rep1 1160.5614577979202 1160.56036993586 56.357 2 0.11956827342158903 0.0011731065327370042 0.006083129780988221 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 100097 7245 SISETYDLK True H1975_Epitope_Rep3 1054.5182555732597 1054.51714993586 32.84 2 0.11956513151590775 0.0011731065327370042 0.006083566297448018 ['CON__P34955'] 2523 8830 AEQPSELVSA True H1975_Epitope_Rep2 1029.4978544818498 1029.49727496793 38.932 1 0.11956209366565826 0.0011731065327370042 0.0060839883861666215 ['ENSG00000183155|ENST00000367262|RABIF'] 114392 15616 TPSPLPTV True PC9_epitope_Rep5 810.4487194614601 810.44762993586 65.077 2 0.11954676456969666 0.0011731065327370042 0.006086118696138573 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 38910 20981 HHFLELVTL True PC9_epitope_Rep1 1107.60767971435 1107.60658993586 85.529 2 0.11954585754791947 0.0011731065327370042 0.006086244769267277 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 130533 5870 VSQVGKEL True PC9_epitope_Rep5 858.4810822188998 858.47998993586 27.571 2 0.11953649781905011 0.0011731065327370042 0.0060875458904939795 ['ENSG00000168209|ENST00000307365|DDIT4'] 97585 7915 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 35.414 2 0.11953491852959279 0.0011731065327370042 0.0060877654585507895 ['nc|ENSG00000128951|P33316-2|DUT'] 141629 15101 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.4906099358602 63.34 2 0.11953138102951069 0.0011731065327370042 0.006088257303978661 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 7607 18440 ASFNDTFVHV True PC9_epitope_Rep5 1135.5298233164701 1135.5287299358602 75.95 2 0.11952611203000542 0.0011731065327370042 0.006088989964765886 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 96944 12035 SAVTNIPHV True PC9_epitope_Rep1 936.50288029264 936.50178993586 51.153 2 0.11952275580782762 0.0011731065327370042 0.006089456696387854 ['TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 35623 12928 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56537496793 54.802 1 0.11952062592822547 0.0011731065327370042 0.00608975290530045 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 6372 5605 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 28.354 2 0.1195198776398117 0.0011731065327370042 0.0060898569754105816 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 66110 15625 LSELEAALQR True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 64.921 2 0.11951896640271445 0.0011731065327370042 0.0060899837103655175 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 140931 4152 YSENVERTKY True H1975_Epitope_Rep3 1287.60953018915 1287.60787490379 21.091 3 0.11951601871169076 0.0011731065327370042 0.006090393693180412 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant', 'TANC2-CRB3|1|fusion', 'TANC2-CRB3|2|fusion'] 12017 12463 DHSGQVTIL True PC9_epitope_Rep2 968.49270953176 968.49160993586 53.25 2 0.11951555836185206 0.0011731065327370042 0.006090457723869947 ['ENSG00000139668|ENST00000298125|WDFY2'] 34921 7781 GQNPTEAEL True NCI_RA007_Epitope_Rep2 957.44033960573 957.4397949679301 34.895 1 0.11951488925283087 0.0011731065327370042 0.006090550792331182 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 27438 23503 FLYPFPLAL True PC9_epitope_Rep4 1079.60555445603 1079.6044499358602 98.708 2 0.11950729954686035 0.0011731065327370042 0.0060916065653509295 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 41227 11047 HVLEEVQQV True PC9_epitope_Rep2 1079.56112344475 1079.56002993586 47.812 2 0.1194888471479647 0.0011731065327370042 0.006094174148075426 ['ENSG00000136026|ENST00000378026|CKAP4'] 84864 5313 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 25.488 2 0.11948439270543051 0.0011731065327370042 0.006094794125387869 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 8569 17014 ATVPGLLKV True PC9_epitope_Rep1 896.5695033004799 896.56840993586 70.268 2 0.11947991357152185 0.0011731065327370042 0.006095417601337219 ['ENSG00000179820|ENST00000391770|MYADM'] 115147 18166 TRDEYLSLVA True PC9_epitope_Rep5 1165.59790287629 1165.5968099358602 74.884 2 0.11947458512935027 0.0011731065327370042 0.006096159378342414 ['ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 74597 20935 NGFPVFATV True PC9_epitope_Rep4 950.48616759934 950.48506993586 88.686 2 0.11947436154562845 0.0011731065327370042 0.006096190505549281 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 105053 7000 SRDPSVIET True PC9_epitope_Rep1 1002.49818883502 1002.49708993586 31.73 2 0.11947146289216236 0.0011731065327370042 0.0060965940685803474 ['ENSG00000172469|ENST00000358812|MANEA', 'MANEA|p.K380Sfs*7|1|0.24|ENSG00000172469|chr6:95606151-95606151|G/-|frameshift_variant', 'MANEA|p.S162C|1|0.17|ENSG00000172469|chr6:95586923-95586923|A/T|missense_variant'] 37767 19308 GYADIVQLL True NCI_RA007_Epitope_Rep5 990.5385970950199 990.5380449679301 81.145 1 0.11946738962468624 0.0011731065327370042 0.006097161210484539 ['ENSG00000134996|ENST00000346234|OSTF1'] 62290 20002 LLFSASARF True PC9_epitope_Rep3 1010.5549158654999 1010.55380993586 82.183 2 0.11945810618688958 0.0011731065327370042 0.006098453983446325 ['ENST00000393067.7_1_11:111224109-111224400:-|nuORF'] 115666 9310 TRYPANSIV True PC9_epitope_Rep2 1019.5399940773499 1019.53888993586 41.15 2 0.11945656073356402 0.0011731065327370042 0.006098669222815977 ['ENST00000474291.1_1_7:97911152-97911766:+|nuORF', 'ENST00000473967.1_1_7:97911152-97912144:+|nuORF', 'nc|ENSG00000164713|O95415-2|BRI3', 'ENST00000456357.6_1_7:97881701-97920552:+|nuORF', 'ENSG00000164713|ENST00000297290|BRI3'] 35645 11565 GTDMEPSLY True H1975_Epitope_Rep2 1011.42191266027 1011.4213749679301 49.549 1 0.1194480894220275 0.0012053913869306352 0.00609984917642488 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 1310 5397 AEDRQVSITA True H1975_Epitope_Rep2 1088.5462016566 1088.5451099358602 25.792 2 0.11944766717143764 0.0012053913869306352 0.006099907996770275 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 11978 18185 DHNYQSYIL True PC9_epitope_Rep1 1151.52473793603 1151.52364993586 74.739 2 0.1194463899441092 0.0012053913869306352 0.006100085920440949 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 34695 8298 GQDVGRYQV True PC9_epitope_Rep1 1020.49885754136 1020.49776993586 36.752 2 0.11942969212067912 0.0012053913869306352 0.006102412470252381 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 17304 13491 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 63.596 2 0.119429362609437 0.0012053913869306352 0.006102458390592914 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 7377 7163 ARSNVNVDL True PC9_epitope_Rep6 986.5145076055 986.51340993586 36.632 2 0.11942026272966966 0.0012053913869306352 0.006103726673489948 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 21434 6547 ERIQHAVQL True PC9_epitope_Rep4 1092.60399131624 1092.60288993586 32.316 2 0.11941941690873328 0.0012053913869306352 0.006103844571649811 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 8518 8588 ATSVITIVK True NCI_RA007_Epitope_Rep1 930.57498260374 930.57388993586 37.408 2 0.11941682443580476 0.0012053913869306352 0.006104205947777048 ['ENSG00000197063|ENST00000357736|MAFG'] 39181 5236 HIEIGPDGR True NCI_RA007_Epitope_Rep2 992.5039429217999 992.50284993586 24.988 2 0.11940630049310716 0.0012053913869306352 0.006105673140478932 ['ENSG00000169813|ENST00000682386|HNRNPF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF'] 56493 18310 LDFEHFLPM[Oxidation]LQ True H1975_Epitope_Rep1 1404.6747736784398 1404.67366993586 76.306 2 0.11940400393210544 0.0012053913869306352 0.006105993360652963 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 76612 19630 NQPGVLIQV True PC9_epitope_Rep3 966.5498304850599 966.54928496793 80.745 1 0.11939994287601215 0.0012053913869306352 0.006106559652680448 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 137463 13927 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.47002496793 58.884 1 0.11939723838700585 0.0012053913869306352 0.0061069368072799845 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 22358 16635 ETDYDQYALLY True H1975_Epitope_Rep2 1392.60852712964 1392.6074299358602 69.219 2 0.11938741891152051 0.0012053913869306352 0.006108306373590492 ['ENST00000462514.1_1_9:139874378-139874549:+|nuORF', 'ENSG00000107317|ENST00000371625|PTGDS'] 139274 21546 YLITLLEHL True PC9_epitope_Rep4 1113.64339651673 1113.6422899358602 91.056 2 0.11938733623423821 0.0012053913869306352 0.0061083179062339935 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant', 'BUB1|p.E43Q|1|0.2|ENSG00000169679|chr2:110674184-110674184|C/G|missense_variant'] 35836 6765 GTLMWHQMK True NCI_RA007_Epitope_Rep3 1130.5365060033798 1130.53486490379 33.704 3 0.11938635658916315 0.0012053913869306352 0.006108454558416917 ['ENST00000352767.7_2_3:184032446-184033585:+|nuORF', 'ENST00000346169.6_1_3:184032401-184033585:+|nuORF'] 130071 9144 VSDFGGRSL True PC9_epitope_Rep4 936.46649478392 936.46538993586 42.764 2 0.1193822915004157 0.0012053913869306352 0.0061090216356993465 ['ENSG00000132383|ENST00000254719|RPA1'] 6721 7225 AQAPDLQRV True PC9_epitope_Rep6 996.5352430500799 996.53414993586 36.902 2 0.11937978965099914 0.0012053913869306352 0.006109370667623732 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 128622 10128 VPVDTGVAA True PC9_epitope_Rep1 827.4388830537498 827.43833496793 43.831 1 0.1193724791518669 0.0012053913869306352 0.006110390663655465 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 72083 5803 MEVKPSSVTA True H1975_Epitope_Rep3 1047.52704643515 1047.5259499358601 27.344 2 0.11937133765088473 0.0012053913869306352 0.006110549946362152 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 101806 12113 SLPEELNRV True PC9_epitope_Rep6 1055.56112344475 1055.56002993586 57.934 2 0.11936623730474033 0.0012053913869306352 0.006111261687688284 ['ENSG00000137815|ENST00000389629|RTF1'] 44339 12049 ILDQKINEV True PC9_epitope_Rep5 1070.5971746003 1070.5960699358602 51.34 2 0.11936394123242308 0.0012053913869306352 0.0061115821255856165 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 62057 16974 LLDTELDLY True H1975_Epitope_Rep2 1093.55430672881 1093.55377496793 70.539 1 0.11935964569982863 0.0012053913869306352 0.006112181650471984 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 130122 13431 VSDPVGVLY True H1975_Epitope_Rep3 947.49639792987 947.4958449679301 56.934 1 0.11935483904514367 0.0012053913869306352 0.0061128525803767686 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 35397 15088 GSDEPAFMYY True H1975_Epitope_Rep3 1178.45902644498 1178.45847496793 63.432 1 0.11935049944917396 0.0012053913869306352 0.006113458378281144 ['ENSG00000155096|ENST00000337198|AZIN1'] 48902 4104 KEDKPPLAP True H1975_Epitope_Rep3 993.5494961318898 993.54838993586 20.91 2 0.11934701650673539 0.0012053913869306352 0.006113944631630667 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 84941 13872 QEEGYIIAV True H1975_Epitope_Rep3 1020.5127762699998 1020.51227496793 58.667 1 0.1193352998103784 0.0012053913869306352 0.006115580675740716 ['nc|ENSG00000155903|Q15283|RASA2', 'ENSG00000155903|ENST00000286364|RASA2'] 134135 19654 VYLDKFIRL True PC9_epitope_Rep2 1165.68593003505 1165.68427490379 80.984 3 0.11933192853698438 0.0012053913869306352 0.006116051497784542 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 44078 20603 IILPEDIEL True PC9_epitope_Rep6 1053.59577761797 1053.59468993586 91.979 2 0.11932974474317506 0.0012053913869306352 0.006116356498821586 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 76931 10242 NRDQYSHLL True PC9_epitope_Rep5 1144.56252042708 1144.56088490379 44.383 3 0.11932143296386774 0.0012053913869306352 0.006117517504803377 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 72056 19832 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55652993586 82.269 2 0.11931845890498269 0.0012053913869306352 0.006117932979526009 ['ENSG00000198712|ENST00000361739|MT-CO2'] 100987 18389 SLFRVITEV True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 83.377 2 0.11931713566053202 0.0012053913869306352 0.006118117845043501 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 121829 14372 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 67.179 2 0.11930933020528862 0.0012053913869306352 0.0061192084267868655 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 130654 10230 VSTEVDARL True PC9_epitope_Rep3 988.5189242795998 988.51782993586 44.3 2 0.11930797661967373 0.0012053913869306352 0.006119397569675347 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 53865 19545 KTIEDTLMTV True PC9_epitope_Rep5 1149.59512599497 1149.5940299358601 80.232 2 0.11930717516054964 0.0012053913869306352 0.006119509564018759 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 17255 8056 EHAGGEVEL True PC9_epitope_Rep5 939.42977492203 939.42866993586 35.925 2 0.1193059880737671 0.0012053913869306352 0.006119675448897033 ['ENSG00000218891|ENST00000325421|ZNF579'] 8204 7064 ATFPDPNVK True NCI_RA007_Epitope_Rep4 987.5025459394699 987.50144993586 33.796 2 0.11930231780126269 0.0012053913869306352 0.006120188364763857 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 88004 13651 QRNPQGFVL True PC9_epitope_Rep5 1057.5668775315298 1057.56578993586 57.532 2 0.11930138268116144 0.0012053913869306352 0.006120319053299607 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 61103 19837 LIIDEIHLL True PC9_epitope_Rep6 1077.64339651673 1077.6422899358602 88.964 2 0.11929767050424837 0.0012053913869306352 0.006120837878716132 ['ENSG00000112249|ENST00000369162|ASCC3'] 78534 13642 NYPQSVPRL True PC9_epitope_Rep3 1072.56654317836 1072.5654499358602 57.538 2 0.1192954403362479 0.0012053913869306352 0.006121149594576616 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 28605 8518 FSHAQTVVL True NCI_RA007_Epitope_Rep4 1000.5341804209199 1000.53308993586 39.556 2 0.11929525361482109 0.0012053913869306352 0.006121175693774943 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 8657 19880 AVAELNYGL True PC9_epitope_Rep5 948.4916469026 948.49109496793 81.521 1 0.11929330948789575 0.0012053913869306352 0.006121447442760806 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 8697 15828 AVANIVNSV True PC9_epitope_Rep2 885.49198125577 885.49088993586 66.141 2 0.11928874133310387 0.0012053913869306352 0.006122086023223717 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 95566 20063 RWSPVRPLVF True PC9_epitope_Rep5 1255.71896149883 1255.7173049037901 82.225 3 0.11928091722924958 0.0012053913869306352 0.006123179902416295 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 11876 16712 DHIHIIAL True PC9_epitope_Rep5 930.52870111766 930.52760993586 69.289 2 0.11927972478847092 0.0012053913869306352 0.006123346632967018 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 84334 9815 PYTKVEESF True PC9_epitope_Rep6 1098.5233409536997 1098.5222499358601 48.215 2 0.11927468036712759 0.0012053913869306352 0.006124052007679028 ['ENSG00000182858|ENST00000330817|ALG12'] 141864 15500 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.5429699358601 64.894 2 0.11926612262656738 0.0012053913869306352 0.006125248840353808 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 1989 12170 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47456993586 51.983 2 0.119264698439338 0.0012053913869306352 0.0061254480405156355 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 8087 10504 ATDVNDALGY True H1975_Epitope_Rep2 1037.4665543535698 1037.46597496793 45.422 1 0.11926416537184205 0.0012053913869306352 0.006125522601952432 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 109621 5095 TEAGAGAVAAA True H1975_Epitope_Rep2 887.4348603024698 887.43431496793 24.68 1 0.119257746435963 0.0012053913869306352 0.006126420503516636 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 98700 6740 [Acetylation]-SGFSTEER True H1975_Epitope_Rep3 953.4090397937499 953.40794993586 30.88 2 0.11925377673885251 0.0012053913869306352 0.0061269758618681305 ['ENSG00000180817|ENST00000373232|PPA1'] 134873 10564 VYVQHPITF True NCI_RA007_Epitope_Rep5 1102.5811306133398 1102.58002993586 47.27 2 0.11924991341453073 0.0012053913869306352 0.006127516385876868 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 88200 19247 QRYNSFISL True PC9_epitope_Rep3 1126.5771078620598 1126.5760099358602 79.254 2 0.1192478675449199 0.0012053913869306352 0.006127802645669331 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 9044 10159 AVHETLVAV True PC9_epitope_Rep6 937.5232813840498 937.52218993586 49.704 2 0.11924735645159333 0.0012053913869306352 0.006127874160312783 ['ENSG00000141873|ENST00000269740|SLC39A3'] 74527 22121 NFLPPIIARF True PC9_epitope_Rep5 1186.6862643882198 1186.6851699358601 90.124 2 0.11924372000467819 0.0012053913869306352 0.006128383013008048 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 43975 15790 IIEPSLRQL True PC9_epitope_Rep4 1067.6338944621898 1067.63278993586 68.662 2 0.11924364339744416 0.0012053913869306352 0.006128393733200135 ['ENSG00000221983|ENST00000442744|UBA52'] 95803 19981 RYINNPLLI True PC9_epitope_Rep3 1114.6498788795 1114.6487899358601 82.102 2 0.11924290065216979 0.0012053913869306352 0.006128497671748066 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 71319 22745 LYQFNPAFF True PC9_epitope_Rep2 1145.5545815123298 1145.5540749679299 92.983 1 0.11923870686640654 0.0012053913869306352 0.006129084575471054 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 45633 19381 IRDNFVIVY True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 79.925 2 0.11922911677685877 0.0012053913869306352 0.00613042687658697 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 64732 14876 LPWQGLKAA True PC9_epitope_Rep4 982.5600012459398 982.55890993586 65.158 2 0.11922757404193048 0.0012053913869306352 0.006130642836151468 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 97171 8946 SDTVVEPY True H1975_Epitope_Rep3 908.41272787556 908.41217496793 39.407 1 0.11922278077209736 0.0012053913869306352 0.006131313868801687 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 36030 5971 GTYVSSVPR True NCI_RA007_Epitope_Rep1 964.4977949121999 964.49668993586 27.272 2 0.11922239135554374 0.0012053913869306352 0.006131368388224318 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 78578 19474 NYQVQFVTL True PC9_epitope_Rep6 1110.57095985246 1110.5698699358602 87.57 2 0.11922024762908336 0.0012053913869306352 0.006131668524479001 ['ENSG00000125484|ENST00000372146|GTF3C4'] 17415 4681 EHDPVGQM[Oxidation]V True PC9_epitope_Rep4 1026.4440454676198 1026.44294993586 24.539 2 0.11921972614278736 0.0012053913869306352 0.006131741538266957 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 49068 7197 KEIDVDAVA True H1975_Epitope_Rep3 958.4971262058599 958.49602993586 32.658 2 0.11921900512460827 0.0012053913869306352 0.0061318424900987925 ['ENSG00000084774|ENST00000264705|CAD'] 68052 11995 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48076993586 51.146 2 0.11921873025760414 0.0012053913869306352 0.0061318809754464885 ['ENSG00000174231|ENST00000304992|PRPF8'] 57760 11217 LEEPLTQVA True H1975_Epitope_Rep1 998.52842633414 998.5278749679301 48.117 1 0.11921466086221406 0.0012053913869306352 0.0061324507770992185 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 107502 12970 SVNGVFKEV True PC9_epitope_Rep5 977.5181960036099 977.51708993586 54.899 2 0.11921464674692298 0.0012053913869306352 0.006132452753629191 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 90429 5394 REILKTYAA True H1975_Epitope_Rep3 1063.6025943339098 1063.6014899358602 25.813 2 0.1192137073662043 0.0012053913869306352 0.006132584294228995 ['ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 5224 23236 ALPEIFTEL True PC9_epitope_Rep1 1031.55391280599 1031.55337496793 94.168 1 0.11921137423120229 0.0012053913869306352 0.0061329110128383645 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 134603 19452 VYSIVPQSW True PC9_epitope_Rep6 1077.54949613189 1077.54897496793 87.485 1 0.11920802713022845 0.0012053913869306352 0.006133379750973726 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 97253 11972 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.46017496793 51.055 1 0.1192011794725322 0.0012053913869306352 0.006134338826526516 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 93421 15379 RQFDVDILI True NCI_RA007_Epitope_Rep5 1117.6131590176099 1117.61206993586 65.86 2 0.11919748578595643 0.0012053913869306352 0.006134856221015946 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 142580 19165 YYLQHPPISF True PC9_epitope_Rep4 1263.62880908175 1263.6277099358601 81.817 2 0.11919418894682256 0.0012053913869306352 0.006135318062905952 ['ENST00000572585.5_1_17:909322-915797:-|nuORF', 'nc|ENSG00000159842|Q12979-3|ABR', 'nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR'] 4352 6893 AILGIHNEVSK True NCI_RA007_Epitope_Rep1 1179.6611718391898 1179.65953490379 30.815 3 0.11918532452029465 0.0012053913869306352 0.006136560015513696 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 111830 20458 TILRLLQQV True PC9_epitope_Rep2 1082.68117900778 1082.68008993586 84.12 2 0.11918076117975682 0.0012053913869306352 0.006137199459040355 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 29862 12313 FVTFDDHD True PC9_epitope_Rep2 994.40322582102 994.40212993586 52.675 2 0.1191789476392881 0.0012053913869306352 0.006137453601603695 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 115802 6988 TSDKPLMY True H1975_Epitope_Rep2 953.45281886573 953.45172993586 31.802 2 0.11916924089032298 0.0012053913869306352 0.006138814042459333 ['ENSG00000157741|ENST00000473989|UBN2'] 453 10730 AALQELLSK True NCI_RA007_Epitope_Rep5 971.5651461960299 971.56404993586 47.913 2 0.11916352584135598 0.0012053913869306352 0.00613961516767627 ['ENSG00000118181|ENST00000527673|RPS25'] 27283 19297 FLQPELVKL True PC9_epitope_Rep4 1085.6484818971699 1085.64738993586 82.331 2 0.1191626837077672 0.0012053913869306352 0.0061397332250576015 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 89268 19197 QVVPVLVHL True PC9_epitope_Rep4 1002.6226015025 1002.62150993586 81.94 2 0.11916037791569496 0.0012053913869306352 0.006140056481747026 ['ENSG00000039123|ENST00000230640|MTREX'] 65410 15909 LREPLPATL True PC9_epitope_Rep5 1008.59678067748 1008.59568993586 66.186 2 0.11915958844466909 0.0012053913869306352 0.006140167164140801 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 11784 20240 DHDRFWVL True PC9_epitope_Rep3 1086.52467836638 1086.5235899358602 83.113 2 0.11915907904296856 0.0012053913869306352 0.006140238582360366 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 71211 15237 LYPEGLAQL True NCI_RA007_Epitope_Rep5 1002.5385970950199 1002.53750993586 65.294 2 0.1191566029507554 0.0012053913869306352 0.006140585742520971 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 54005 21976 KVFELDLVTL True PC9_epitope_Rep5 1175.6801759482698 1175.67906993586 89.561 2 0.11915467115297378 0.0012053913869306352 0.006140856603251322 ['ENSG00000117724|ENST00000366955|CENPF'] 31178 10793 GAYKYIQEL True H1975_Epitope_Rep3 1083.56006081559 1083.5589699358602 46.596 2 0.1191536755281449 0.0012053913869306352 0.006140996206092534 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 26070 20277 FGLARAFGV True PC9_epitope_Rep1 936.5181364339599 936.51702993586 82.823 2 0.1191530634868792 0.0012053913869306352 0.006141082025797609 ['nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'ENST00000554619.5_1_12:56361683-56363594:+|nuORF', 'ENST00000556656.5_1_12:56361683-56365109:+|nuORF'] 87966 21586 QRMDILDVL True PC9_epitope_Rep1 1101.5852300176098 1101.5841299358601 87.853 2 0.11915201781882945 0.0012053913869306352 0.006141228650845824 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 138470 16587 YHQDAFMQL True PC9_epitope_Rep4 1151.5069796969099 1151.50588993586 71.778 2 0.11914704691319677 0.0012053913869306352 0.006141925724940528 ['ENSG00000170852|ENST00000304056|KBTBD2'] 136857 12504 YADPTKRLEL True PC9_epitope_Rep2 1204.6451874218799 1204.6435349037902 53.406 3 0.11914244061399405 0.0012053913869306352 0.006142571738869867 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5'] 89634 22236 QYSPLLAAF True PC9_epitope_Rep2 1008.5280324113198 1008.52692993586 91.009 2 0.11914151017361199 0.0012053913869306352 0.006142702237232709 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 29495 21505 FVFPGELLL True H1975_Epitope_Rep3 1033.5848190114498 1033.5837299358602 89.871 2 0.11914033157323071 0.0012053913869306352 0.006142867545010743 ['ENSG00000105281|ENST00000542575|SLC1A5'] 88279 14410 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.48374993586 60.58 2 0.11913206460517317 0.0012053913869306352 0.006144027172888967 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 115716 8502 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.5853349679301 39.503 1 0.11912085094412835 0.0012053913869306352 0.006145600481845769 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 28010 8471 FQNALLVR True H1975_Epitope_Rep1 959.5552502186699 959.55414993586 37.514 2 0.11911603289725683 0.0012053913869306352 0.006146276588380537 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 1356 9782 AEEADLIQA True H1975_Epitope_Rep1 958.4607406971398 958.4601949679301 42.555 1 0.11911531334745927 0.0012053913869306352 0.006146377567538648 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 62174 13986 LLENDVSTLGY True H1975_Epitope_Rep1 1222.60813320682 1222.60702993586 58.955 2 0.11911507485616307 0.0012053913869306352 0.006146411036948663 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 85176 5642 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47634993586 26.737 2 0.11910626088832803 0.0012053913869306352 0.00614764809693189 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 4458 13332 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 56.14 2 0.11908881921727721 0.0012053913869306352 0.006150096789985927 ['ENSG00000181789|ENST00000314797|COPG1'] 21689 4130 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 22.794 2 0.11908632695090435 0.0012053913869306352 0.006150446765050067 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 101860 10934 SLPKGVVEV True PC9_epitope_Rep6 926.54368247546 926.54258993586 52.93 2 0.1190791027489494 0.001234657564093253 0.0061514613291837284 ['ENSG00000149257|ENST00000358171|SERPINH1'] 86309 10080 QITQINHGL True PC9_epitope_Rep1 1022.5508931142199 1022.5497899358601 43.643 2 0.119076311835984 0.001234657564093253 0.006151853327630399 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 31738 5614 GEGSPPAVAA True H1975_Epitope_Rep3 854.4133965818999 854.41284496793 26.631 1 0.11907053908817848 0.001234657564093253 0.006152664217818992 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant'] 76861 14967 NRDGNIVFV True PC9_epitope_Rep1 1032.5352430500798 1032.5341499358601 62.391 2 0.11906803823715795 0.001234657564093253 0.006153015541388402 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 68093 4699 LTDNGRHITY True H1975_Epitope_Rep3 1188.58873517492 1188.5870849037901 23.2 3 0.11906718078488622 0.001234657564093253 0.0061531360021650815 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.A516Qfs*19|1|0.53|ENSG00000103197|chr16:2064373-2064373|G/-|frameshift_variant'] 103957 15621 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51289496793 72.291 1 0.11906552070243161 0.001234657564093253 0.00615336922847238 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 41506 17152 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 70.997 2 0.1190506443747011 0.001234657564093253 0.006155459600438844 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 116304 6134 TTDSSYGQNY True H1975_Epitope_Rep2 1134.4465471849799 1134.44597496793 28.572 1 0.11904844738201996 0.001234657564093253 0.00615576837320975 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 69570 16680 LVDEWLDSY True H1975_Epitope_Rep3 1138.51825557326 1138.51714993586 69.68 2 0.11904248274747056 0.001234657564093253 0.0061566067392677774 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 5372 10201 ALSGHLETV True PC9_epitope_Rep3 925.48689587533 925.48578993586 44.189 2 0.11903854943561322 0.001234657564093253 0.006157159651356941 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 27098 17726 FLGYPITL True H1975_Epitope_Rep3 922.5164050984599 922.5158549679301 74.108 1 0.11903591724175476 0.001234657564093253 0.006157529690204848 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 107772 5740 SVSTVLTSK True NCI_RA007_Epitope_Rep4 920.51786165044 920.51676993586 28.698 2 0.11902892483460749 0.001234657564093253 0.006158512801513922 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 114386 15792 TPSPLPTV True PC9_epitope_Rep1 810.4487194614601 810.44762993586 65.559 2 0.1190271822826934 0.001234657564093253 0.006158757822871707 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 95975 14122 RYLEQLHQL True PC9_epitope_Rep3 1198.64585612822 1198.64422490379 59.406 3 0.11902514433118186 0.001234657564093253 0.00615904439261985 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 40774 9363 HRVEEEHVIL True PC9_epitope_Rep1 1259.6622344683499 1259.66059490379 40.872 3 0.11902437097161579 0.001234657564093253 0.006159153143191773 ['ENSG00000136381|ENST00000258886|IREB2'] 20050 12967 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep3 1154.4801561928198 1154.47957496793 55.11 1 0.11902010740530523 0.001234657564093253 0.0061597527236405426 ['ENSG00000182195|ENST00000370526|LDOC1'] 95813 10331 RYIPTAAAF True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.53816993586 46.596 2 0.11901476914487598 0.001234657564093253 0.006160503517344498 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 71134 23860 LYLPSFFTY True PC9_epitope_Rep1 1149.57464825057 1149.57354993586 96.579 2 0.11901332080577372 0.001234657564093253 0.006160707232778154 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 140863 8971 YSDVGRYIDHY True H1975_Epitope_Rep3 1386.62042922602 1386.61879490379 39.502 3 0.1190102867215993 0.001234657564093253 0.006161134011711796 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 134425 20571 VYPLMKEYF True PC9_epitope_Rep1 1188.5889184157197 1188.58782993586 83.941 2 0.11900461686543634 0.001234657564093253 0.006161931619658729 ['ENSG00000100109|ENST00000407690|TFIP11'] 111027 12275 THDEAINVL True PC9_epitope_Rep2 1010.5032742154599 1010.50216993586 52.525 2 0.1190016787881755 0.001234657564093253 0.006162344973768695 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 84922 13271 QEDSLNWVA True H1975_Epitope_Rep2 1060.48253877088 1060.4814499358602 56.176 2 0.1189992020087018 0.001234657564093253 0.006162693449523542 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 9362 10496 AVSDGVIKV True PC9_epitope_Rep4 886.5123823471799 886.51128993586 48.093 2 0.11899745671944466 0.001234657564093253 0.006162939018248754 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 2867 6413 AEVGGSPEV True H1975_Epitope_Rep2 843.3974121645899 843.39686496793 29.592 1 0.11898994387247395 0.001234657564093253 0.00616399621286789 ['ENST00000489142.5_1_10:114207101-114244859:+|nuORF', 'ENST00000357585.3_2_17:71167612-71167879:+|nuORF'] 21867 11165 ESDEVELSY True H1975_Epitope_Rep3 1069.44515020265 1069.4445749679298 48.043 1 0.118988786565103 0.001234657564093253 0.006164159082845788 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 114989 19493 TRADLIFTV True PC9_epitope_Rep2 1034.5760452328998 1034.57494993586 80.362 2 0.1189885582745612 0.001234657564093253 0.00616419121108584 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 134900 19765 VYVSDIQEL True PC9_epitope_Rep2 1064.5389910178399 1064.5378899358602 81.414 2 0.11897722971245604 0.001234657564093253 0.006165785730022783 ['ENSG00000132182|ENST00000254508|NUP210'] 21251 12094 ERDQATVIL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 51.514 2 0.11897502747326481 0.001234657564093253 0.006166095746511898 ['ENST00000495360.5_1_9:32987651-32989804:-|nuORF'] 24228 5358 EYSKQMQRF True PC9_epitope_Rep2 1215.57064258263 1215.56899490379 25.995 3 0.11896679046124704 0.001234657564093253 0.006167255432676341 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 103907 12919 SQAIAFQQA True PC9_epitope_Rep1 962.4821448480601 962.48104993586 54.565 2 0.11896292046127256 0.001234657564093253 0.006167800362113955 ['ENSG00000139168|ENST00000266529|ZCRB1'] 111906 15283 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.53308993586 63.795 2 0.118952758806158 0.001234657564093253 0.0061692314344771 ['ENSG00000213719|ENST00000375784|CLIC1'] 49251 6316 KEQEPMPTV True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 29.23 2 0.11895260248149843 0.001234657564093253 0.006169253452307188 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2'] 7514 14463 ASDMLQLEY True H1975_Epitope_Rep3 1068.4797618895598 1068.4786699358601 60.99 2 0.11894794700736849 0.001234657564093253 0.006169909196124437 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 54959 6065 KYQEVTNNL True NCI_RA007_Epitope_Rep3 1107.5560380643099 1107.55547496793 30.839 1 0.11894500822875144 0.001234657564093253 0.00617032317089243 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 138529 19485 YHVDSLLQL True PC9_epitope_Rep4 1086.57095985246 1086.5698699358602 83.065 2 0.11894276084400228 0.001234657564093253 0.006170639769865153 ['ENSG00000141002|ENST00000263346|TCF25'] 132486 13756 VVDGNFEEV True PC9_epitope_Rep6 1006.46074069714 1006.4596499358599 64.71 2 0.11893615278883228 0.001234657564093253 0.006171570767424909 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 75093 14928 NHVSSPFEL True PC9_epitope_Rep4 1028.4927095317598 1028.4916099358602 65.361 2 0.11892846397832385 0.001234657564093253 0.0061726542031592885 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 17551 19108 EHGNFLITV True PC9_epitope_Rep5 1028.52909504048 1028.52857496793 78.531 1 0.11892338810710704 0.001234657564093253 0.006173369549401149 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 37575 17357 GVVPQLVKL True PC9_epitope_Rep6 951.6117024656298 951.61060993586 79.379 2 0.1189227799557374 0.001234657564093253 0.006173455262041144 ['ENSG00000182481|ENST00000330459|KPNA2'] 87818 13927 QRELDTVTL True PC9_epitope_Rep1 1073.57168812845 1073.5705899358602 58.405 2 0.11891749974302296 0.001234657564093253 0.006174199502142114 ['ENSG00000108344|ENST00000264639|PSMD3'] 62935 21881 LLPDYYLVTV True PC9_epitope_Rep4 1194.65362684726 1194.65252993586 92.377 2 0.1189125125587047 0.001234657564093253 0.006174902520558332 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 1436 14207 AEEFPNLAVA True H1975_Epitope_Rep2 1059.5236753068698 1059.52256993586 59.799 2 0.11890519869437428 0.001234657564093253 0.006175933660589909 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 104402 7427 SQLDEVRQA True PC9_epitope_Rep1 1044.51998690876 1044.5188899358602 33.383 2 0.11890182683575905 0.001234657564093253 0.00617640909625654 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'ENST00000514708.5_1_4:1309356-1332271:+|nuORF', 'ENST00000515766.1_1_4:1326530-1330951:+|nuORF', 'ENST00000506530.5_1_4:1326530-1332660:+|nuORF'] 39877 8053 HPDYNNEL True PC9_epitope_Rep1 1000.4250238947601 1000.42392993586 35.798 2 0.11890071953920178 0.001234657564093253 0.006176565234038235 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 99866 13405 SILPAIFQK True NCI_RA007_Epitope_Rep3 1015.6066170851899 1015.60552993586 60.008 2 0.11889390826901189 0.001234657564093253 0.006177525762951973 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 77252 17527 NRYEDALVL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 72.423 2 0.11889152461325535 0.001234657564093253 0.006177861941748161 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 3261 4676 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.43990993586 24.669 2 0.11888949265839699 0.001234657564093253 0.006178148532507143 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 96198 6500 RYPNKLDTI True NCI_RA007_Epitope_Rep4 1118.6084079903399 1118.60730993586 31.607 2 0.11888102454468549 0.001234657564093253 0.006179343030888741 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000513757.5_1_5:1479693-1494872:-|nuORF'] 99237 7569 SHMEGVASV True PC9_epitope_Rep5 915.4120166829099 915.41090993586 34.063 2 0.11887780265214849 0.001234657564093253 0.0061797975649604 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 35003 6005 GQTGVIRSV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 30.07 2 0.11887529816781112 0.001234657564093253 0.0061801509119479 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 39096 7807 HHTTQQTFL True PC9_epitope_Rep5 1111.54105670651 1111.53994993586 34.973 2 0.1188744768542795 0.001234657564093253 0.006180266791852108 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 4489 11961 AIWGSESNY True H1975_Epitope_Rep2 1025.4454249861699 1025.4443299358602 51.087 2 0.11887127431046911 0.001234657564093253 0.006180718662029644 ['ENSG00000069248|ENST00000261396|NUP133', 'NUP133|p.E332D|1|0.23|ENSG00000069248|chr1:229495545-229495545|T/A|missense_variant'] 76611 19618 NQPGVLIQV True PC9_epitope_Rep3 966.5498304850599 966.54872993586 80.699 2 0.11886814878140495 0.001234657564093253 0.006181159696699475 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 20743 8106 EQEVNILK True PC9_epitope_Rep6 971.5287606873098 971.52766993586 40.708 2 0.11886742356455066 0.001234657564093253 0.006181262034408733 ['ENSG00000100345|ENST00000216181|MYH9'] 140413 20294 YRFLIQNVL True PC9_epitope_Rep4 1164.6655289436399 1164.6644299358602 86.204 2 0.11886152037239824 0.001234657564093253 0.006182095114514346 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000472894.1_1_9:95018893-95021273:-|nuORF'] 121865 16057 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 66.752 2 0.11885824085093787 0.001234657564093253 0.006182557979903431 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 107387 17652 SVLKSLVEI True PC9_epitope_Rep6 986.6011973515799 986.60010993586 80.537 2 0.11885572264454591 0.001234657564093253 0.006182913417674616 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 128634 9242 VPVDTGVAA True PC9_epitope_Rep4 827.4388830537498 827.43833496793 43.147 1 0.11885064848235775 0.001234657564093253 0.006183629681964034 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 7263 14900 ARDETEFYL True PC9_epitope_Rep6 1142.5244035828598 1142.5233099358602 69.303 2 0.1188461986630046 0.001234657564093253 0.00618425788115235 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 76876 11512 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 49.16 2 0.11884605948258053 0.001234657564093253 0.006184277530825345 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 99200 16802 SHLDYDITL True PC9_epitope_Rep6 1075.5185899264302 1075.51748993586 77.134 2 0.11884122868399498 0.001234657564093253 0.006184959586969714 ['ENSG00000163960|ENST00000296328|UBXN7'] 76961 6811 NRDVPNETL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 33.413 2 0.11883992019777999 0.001234657564093253 0.006185144343595318 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.V235A|1|0.18|ENSG00000205339|chr11:9417126-9417126|T/C|missense_variant', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 65901 10377 LSDPGSGLY True H1975_Epitope_Rep3 907.4287122928699 907.42816496793 44.971 1 0.11883840205036622 0.001234657564093253 0.006185358710865198 ['ENSG00000182108|ENST00000331808|DEXI'] 18828 8627 ELDPDNETY True H1975_Epitope_Rep1 1094.44039917538 1094.4393099358601 38.11 2 0.11883630401267815 0.001234657564093253 0.006185654972419797 ['ENSG00000104969|ENST00000221566|SGTA'] 137596 7008 YEERVQAVVA True H1975_Epitope_Rep1 1162.59823722946 1162.5971499358602 31.991 2 0.11883231958453554 0.001234657564093253 0.006186217647149717 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 4065 11516 AHLDATTVL True PC9_epitope_Rep6 939.5025459394701 939.50144993586 55.38 2 0.11883193545831716 0.001234657564093253 0.006186271895492871 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 9189 8192 AVLSSPLSH True NCI_RA007_Epitope_Rep4 909.49198125577 909.49088993586 38.298 2 0.1188250145407148 0.001234657564093253 0.006187249383676487 ['ENSG00000110799|ENST00000261405|VWF', 'VWF|p.N911Ifs*9|1|0.28|ENSG00000110799|chr12:6031534-6031534|C/-|frameshift_variant'] 87444 11377 QPYQPLREV True PC9_epitope_Rep2 1128.5927579261997 1128.5916699358602 49.082 2 0.11881645187278211 0.001234657564093253 0.006188458955828614 ['ENST00000547003.1_1_12:49916566-49919899:+|nuORF', 'ENST00000549412.5_2_12:49906680-49920035:+|nuORF', 'ENSG00000123352|ENST00000552918|SPATS2'] 1416 8188 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 36.447 2 0.1188162141840312 0.001234657564093253 0.006188492535298936 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 47925 13896 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.6890249037901 58.288 3 0.11881599115134181 0.001234657564093253 0.006188524044396226 ['ENSG00000103479|ENST00000262133|RBL2'] 95784 18900 RYIDRIHIFF True PC9_epitope_Rep4 1378.7509899031 1378.74934490379 80.786 3 0.11881362315699623 0.001234657564093253 0.006188858594080626 ['ENSG00000174231|ENST00000304992|PRPF8'] 76934 7526 NRDRTQIAL True PC9_epitope_Rep1 1085.59415490853 1085.59304993586 33.766 2 0.11881232808584063 0.001234657564093253 0.006189041568888275 ['ENSG00000241685|ENST00000262942|ARPC1A'] 59988 3810 LGIHEDSTNR True NCI_RA007_Epitope_Rep2 1140.5523496662001 1140.5506949037901 19.454 3 0.11879638746067217 0.001234657564093253 0.00619129418054567 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 7258 17101 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.5233099358602 70.801 2 0.11879574912469049 0.001234657564093253 0.006191384402126482 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 8090 10464 ATDVNDALGY True H1975_Epitope_Rep3 1037.4665543535698 1037.46544993586 45.312 2 0.11879480699371414 0.001234657564093253 0.006191517564040512 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 17815 19878 EHSTVITFL True PC9_epitope_Rep1 1045.54441075145 1045.5433099358602 81.28 2 0.11879431649537744 0.001234657564093253 0.006191586892764828 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 62130 2622 LLEGEESR True NCI_RA007_Epitope_Rep5 931.4610750503099 931.45996993586 14.773 2 0.11878442477322283 0.001234657564093253 0.006192985184401161 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 117665 20250 TVTSDLLQV True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 83.311 2 0.11878036490848982 0.001234657564093253 0.006193559175087184 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 6277 2537 APRGDGVQVSA True PC9_epitope_Rep6 1055.5359713260698 1055.5348699358601 14.688 2 0.11877350518253657 0.001234657564093253 0.006194529132851598 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 4486 15223 AIVKEIVNI True PC9_epitope_Rep6 997.6171817688898 997.61608993586 70.653 2 0.11877152825271499 0.001234657564093253 0.006194808696061986 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 31383 15212 GDSVIVVLR True PC9_epitope_Rep3 956.5654805492 956.56438993586 63.658 2 0.11876547517418144 0.001234657564093253 0.006195664755431904 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 67654 16159 LSVTELDRV True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 67.41 2 0.11875856736742771 0.001234657564093253 0.006196641836047358 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 14020 20446 DRFSDIYAL True PC9_epitope_Rep5 1098.53457434374 1098.53346993586 83.682 2 0.11875692442622299 0.001234657564093253 0.0061968742453808135 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 118361 23288 TYNMVLNLL True PC9_epitope_Rep1 1079.56851732431 1079.56740993586 94.365 2 0.11875409900572517 0.001234657564093253 0.0061972739472972846 ['ENSG00000039123|ENST00000230640|MTREX'] 105599 11314 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45826993586 48.566 2 0.11875043772668613 0.001234657564093253 0.0061977919324583885 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 46444 17065 ISTEVGITNV True PC9_epitope_Rep2 1031.54989005471 1031.54937496793 70.891 1 0.11874857239010485 0.001234657564093253 0.006198055850090771 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 57513 12137 LEDLPTVEA True H1975_Epitope_Rep3 985.49679185269 985.49624496793 51.853 1 0.1187483079002603 0.001234657564093253 0.0061980932723923144 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 92291 18912 RLLETVIDV True PC9_epitope_Rep4 1056.61791004488 1056.6168099358601 80.832 2 0.11874801095296589 0.001234657564093253 0.0061981352873159475 ['ENSG00000179409|ENST00000319004|GEMIN4'] 41197 14973 HVIGSLAEI True PC9_epitope_Rep4 937.5232813840499 937.52218993586 65.532 2 0.11874665366968894 0.001234657564093253 0.006198327332180811 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 29779 18847 FVPEIFHRI True PC9_epitope_Rep5 1156.6393141958 1156.63765490379 77.512 3 0.11873969478584509 0.001234657564093253 0.0061993120504152946 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 24764 9688 FASHVSPEV True PC9_epitope_Rep3 971.47124581119 971.47014993586 42.212 2 0.11873573026664168 0.001234657564093253 0.0061998731186866775 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 96920 12593 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 53.308 2 0.11872854610413136 0.001234657564093253 0.0062008899647512375 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 127649 9718 VPAGGAVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 42.721 1 0.11872672632445097 0.001234657564093253 0.006201147562100552 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 7894 7562 ATAIGMPVEK True NCI_RA007_Epitope_Rep2 1015.5372171960299 1015.5361099358599 34.039 2 0.11872543321137476 0.001234657564093253 0.006201330613951986 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 1148 5693 AEAPPPPPP True H1975_Epitope_Rep3 871.44396843419 871.44286993586 26.928 2 0.11872404082196301 0.001234657564093253 0.006201527725157006 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 95273 12221 RVPKTLVLV True PC9_epitope_Rep2 1023.6804507317898 1023.6793499358599 52.321 2 0.11871789881678858 0.001234657564093253 0.006202397280426339 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 108896 9200 TAAPSPLRL True H1975_Epitope_Rep2 924.53926580136 924.53816993586 40.341 2 0.1187170353484097 0.001234657564093253 0.006202519535616757 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 25390 15430 FEDDAIQLV True H1975_Epitope_Rep2 1048.50769088956 1048.5065899358601 64.509 2 0.11871437021899524 0.001234657564093253 0.006202896895930143 ['ENSG00000085840|ENST00000371568|ORC1'] 38448 8898 HENPDIIIA True H1975_Epitope_Rep3 1020.52400966004 1020.52290993586 39.223 2 0.11871231435960318 0.001234657564093253 0.006203188003933024 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000546869.1_1_12:113614643-113615134:-|nuORF'] 9092 18424 AVIGDVIRV True PC9_epitope_Rep5 940.57056592964 940.56946993586 75.888 2 0.11870960749626089 0.001234657564093253 0.006203571313875243 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 37589 12161 GVVPTIQKV True PC9_epitope_Rep2 939.5753169569098 939.57420993586 52.089 2 0.11870403763772255 0.001234657564093253 0.006204360115719754 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 95827 13027 RYIPTAAAF True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 61.692 2 0.1187025622688552 0.001234657564093253 0.006204569073436432 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 48654 12737 KASDLYITL True NCI_RA007_Epitope_Rep2 1022.56481184286 1022.56370993586 54.162 2 0.11870172706279662 0.001234657564093253 0.006204687367404838 ['ENSG00000143418|ENST00000368954|CERS2'] 74859 16047 NHFPGSFQI True PC9_epitope_Rep6 1045.49812926537 1045.4970299358602 74.049 2 0.11869988847324757 0.001234657564093253 0.00620494778281122 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 21279 18959 ERDTYMLLL True PC9_epitope_Rep6 1152.58489566444 1152.58378993586 85.572 2 0.11869731170237743 0.001234657564093253 0.006205312771181516 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 76424 14219 NQDTHLLYV True PC9_epitope_Rep4 1101.54547338061 1101.54436993586 62.601 2 0.11869632087864514 0.001234657564093253 0.006205453122619123 ['ENSG00000182179|ENST00000333486|UBA7'] 71142 23806 LYLPSFFTY True PC9_epitope_Rep5 1149.57464825057 1149.57354993586 96.551 2 0.11869148720781734 0.001234657564093253 0.0062061378625967575 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 86100 11544 QHTPTSITL True PC9_epitope_Rep1 996.52400966004 996.52290993586 49.282 2 0.11869124131777338 0.001234657564093253 0.0062061726974595565 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 17268 14830 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 62.307 2 0.11868746192632529 0.001234657564093253 0.006206708141991933 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 61218 15703 LILSPTREL True PC9_epitope_Rep2 1040.62299542532 1040.62188993586 65.677 2 0.11868689219151914 0.001234657564093253 0.006206788862963677 ['ENSG00000088205|ENST00000263239|DDX18', 'DDX18|p.M265I|1|0.18|ENSG00000088205|chr2:117821905-117821905|G/T|missense_variant', 'ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54'] 31873 10605 GELLFVHSA True H1975_Epitope_Rep1 971.50763131991 971.50652993586 45.746 2 0.11868031424851262 0.001234657564093253 0.0062077209109599706 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 12723 8793 DLEDSLAR True NCI_RA007_Epitope_Rep1 917.4454249861699 917.44432993586 38.205 2 0.11867667792103229 0.001234657564093253 0.006208236211406517 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 76486 7687 NQIDHEVTV True PC9_epitope_Rep6 1053.50908787189 1053.50798993586 38.896 2 0.1186754591011466 0.001234657564093253 0.006208408938523537 ['ENSG00000112159|ENST00000369393|MDN1'] 43140 16892 IFDLGGGTFD True H1975_Epitope_Rep1 1040.48147614172 1040.48097496793 70.385 1 0.11866692389526333 0.001234657564093253 0.006209618650918657 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 72543 20583 MLLDVMHTV True PC9_epitope_Rep5 1057.5300236406101 1057.52892993586 84.22 2 0.11865575427846989 0.001234657564093253 0.006211202090964223 ['nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN'] 121371 6074 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 28.43 2 0.11865517359263399 0.001234657564093253 0.006211284421579963 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 6720 7147 AQAPDLQRV True PC9_epitope_Rep6 996.5352430500799 996.53414993586 36.564 2 0.11865515751873877 0.001234657564093253 0.006211286700579029 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 60761 12537 LHSDLEYTV True PC9_epitope_Rep4 1075.51858992643 1075.51748993586 56.043 2 0.11863856102065135 0.001234657564093253 0.006213640230658072 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 32209 6741 GEYEWVHKP True NCI_RA007_Epitope_Rep3 1143.53490869691 1143.53326490379 33.606 3 0.11863665731892142 0.001234657564093253 0.006213910247959021 ['ENSG00000117133|ENST00000370654|RPF1'] 26454 16357 FIDDANYSV True PC9_epitope_Rep6 1042.4607406971402 1042.4596499358602 75.295 2 0.11863511313273498 0.001234657564093253 0.006214129280686465 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 93391 8741 RQAPIPAEL True NCI_RA007_Epitope_Rep4 993.5607295219298 993.55962993586 40.415 2 0.11863289338750085 0.001234657564093253 0.006214444150239795 ['ENSG00000169583|ENST00000494426|CLIC3'] 115395 14163 TRLEFQQQL True PC9_epitope_Rep2 1161.61422164677 1161.6131299358601 59.747 2 0.11863102111254602 0.001234657564093253 0.006214709743430813 ['ENSG00000171159|ENST00000372994|BBLN'] 90115 5998 REAQSLISA True NCI_RA007_Epitope_Rep3 973.5192586327698 973.51816993586 30.57 2 0.11862930640321881 0.001234657564093253 0.006214952994720752 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 62374 19614 LLGPRLVLA True PC9_epitope_Rep1 950.6276868829399 950.62658993586 80.272 2 0.11861685551095168 0.001234657564093253 0.0062167195757719725 ['ENSG00000170348|ENST00000303575|TMED10'] 24673 20662 FALPGLLHA True PC9_epitope_Rep2 937.5385375253701 937.53744993586 84.913 2 0.11861397637700694 0.001234657564093253 0.006217128148181887 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 68637 21938 LTIEDGIFEV True PC9_epitope_Rep4 1134.58085582982 1134.5802749679299 92.595 1 0.11860976275625655 0.001234657564093253 0.006217726142259248 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 84865 5410 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 25.841 2 0.11860739365084472 0.001234657564093253 0.006218062388649611 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 26707 18432 FIVHTIEEI True PC9_epitope_Rep4 1099.5913609438699 1099.59026993586 78.967 2 0.11860153491032432 0.001234657564093253 0.006218893993984176 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 35885 4038 GTM[Oxidation]TGM[Oxidation]LYK True NCI_RA007_Epitope_Rep4 1032.4620044113199 1032.4609099358602 21.79 2 0.11859154166037146 0.001234657564093253 0.006220312712865586 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 138124 21955 YGIENEVFL True PC9_epitope_Rep3 1082.52842633414 1082.52732993586 89.75 2 0.11859075844646394 0.001234657564093253 0.006220423917287958 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 142208 14293 YVYPDERTAL True PC9_epitope_Rep5 1225.59790287629 1225.5968099358602 59.981 2 0.1185614497730787 0.001234657564093253 0.006224586695124438 ['ENSG00000145391|ENST00000274031|SETD7'] 115548 5135 TRSITNTTV True PC9_epitope_Rep4 991.52982331647 991.52872993586 26.416 2 0.11856043596720713 0.001234657564093253 0.006224730736869982 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 108300 19733 SYIQQINNL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 80.949 2 0.11855993684567497 0.001234657564093253 0.006224801653352965 ['ENSG00000108395|ENST00000262294|TRIM37', 'nc|ENSG00000108395|O94972-3|TRIM37', 'nc|ENSG00000108395|O94972-2|TRIM37'] 88968 14738 QVIEKFEAL True PC9_epitope_Rep6 1075.5913609438699 1075.59026993586 68.639 2 0.11855977940225647 0.001234657564093253 0.0062248240234859765 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 24704 21747 FAMEIDPSL True PC9_epitope_Rep1 1021.4790336135699 1021.47792993586 88.483 2 0.11855810440369041 0.001234657564093253 0.006225062018220597 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 76048 11108 NMDNM[Oxidation]FESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 47.761 2 0.11855688992170307 0.001234657564093253 0.0062252345852996105 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 90803 5484 RESPFSTSA True H1975_Epitope_Rep2 980.45632402304 980.45522993586 26.108 2 0.11855339801748595 0.001234657564093253 0.006225730779783479 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 74853 18846 NHFPGSFQI True PC9_epitope_Rep3 1045.49812926537 1045.4970299358602 77.713 2 0.11855076501838074 0.001234657564093253 0.006226104950601837 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 2170 6116 AELSELHSA True H1975_Epitope_Rep3 955.4610750503101 955.45996993586 28.537 2 0.1185481480668709 0.001234657564093253 0.006226476862646193 ['nc|ENSG00000171444|P23508|MCC'] 44649 8241 ILSGVVTK True PC9_epitope_Rep3 815.51165407119 815.51054993586 36.676 2 0.11854526782584127 0.001234657564093253 0.006226886217514984 ['ENSG00000142534|ENST00000270625|RPS11'] 89076 11307 QVNDAFTHV True PC9_epitope_Rep5 1029.4879585044898 1029.48686993586 48.485 2 0.11853666195844828 0.001234657564093253 0.006228109484551347 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 39054 16089 HHSNILLTF True PC9_epitope_Rep2 1080.5716285588 1080.5705299358601 67.143 2 0.11853561102159574 0.001234657564093253 0.006228258884311518 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 90529 8842 RELVKNWVP True H1975_Epitope_Rep3 1139.64512785223 1139.64402993586 39.017 2 0.11853532450547188 0.001234657564093253 0.006228299615661822 ['ENSG00000127540|ENST00000591899|UQCR11'] 76659 10958 NQSDTSVSL True PC9_epitope_Rep1 949.43525422529 949.4347049679301 47.038 1 0.118531307175649 0.001234657564093253 0.006228870749673042 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 104627 16664 SQSSLIHLV True PC9_epitope_Rep5 982.5447451046201 982.54364993586 69.103 2 0.11853115820749555 0.001234657564093253 0.006228891929094762 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 6149 11493 APM[Oxidation]PPIIHA True PC9_epitope_Rep3 961.50552352537 961.50442993586 49.21 2 0.11852941755411152 0.001234657564093253 0.006229139410225588 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 24579 18724 FAHVIFQNV True PC9_epitope_Rep5 1073.56581490237 1073.56470993586 77.038 2 0.11852763431355087 0.001234657564093253 0.006229392956219026 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'ENST00000490455.1_1_7:27788143-27797760:+|nuORF'] 64781 18820 LQAPELANV True PC9_epitope_Rep5 953.5181960036099 953.51708993586 77.404 2 0.11851975242024282 0.001234657564093253 0.0062305137457520695 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 21657 18034 ERSDTFINL True PC9_epitope_Rep3 1093.54038800017 1093.53928993586 74.569 2 0.11851950576172436 0.001234657564093253 0.006230548823273977 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 32566 8190 GGGQIIPTAR True PC9_epitope_Rep1 968.5403284305199 968.53922993586 36.337 2 0.11851489625216714 0.001234657564093253 0.006231204381041325 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 135088 8128 WEDFKQNTP True H1975_Epitope_Rep2 1163.5247379360299 1163.52364993586 36.214 2 0.11851131983785128 0.001234657564093253 0.0062317130598211045 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 139326 21752 YLLDLHSYL True PC9_epitope_Rep3 1135.59136094387 1135.59026993586 88.965 2 0.11851079620711819 0.001234657564093253 0.006231787540003738 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 47420 22297 IVLPEDLQL True PC9_epitope_Rep1 1038.5961119711399 1038.59557496793 90.577 1 0.1185104394452765 0.001234657564093253 0.006231838285587756 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 6906 13735 AQIGSYVHV True PC9_epitope_Rep1 972.50288029264 972.50178993586 57.678 2 0.11850732333443184 0.001234657564093253 0.006232281536393846 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 13974 6585 DRDPASGTAL True PC9_epitope_Rep4 1001.47778774361 1001.47668993586 32.486 2 0.11849491737344618 0.001234657564093253 0.006234046525540036 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 26337 14626 FHQPDSVIL True PC9_epitope_Rep4 1054.54474510462 1054.54364993586 64.188 2 0.11847764101436269 0.001234657564093253 0.006236505235217432 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 28798 19097 FSVDDVQTV True PC9_epitope_Rep5 1008.4763907612801 1008.47528993586 78.486 2 0.11847672625212824 0.001234657564093253 0.006236635447254995 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 44552 16570 ILNLPTFS True H1975_Epitope_Rep3 903.5065686907501 903.5060249679301 69.234 1 0.11847448587432995 0.001234657564093253 0.006236954365533363 ['ENSG00000126067|ENST00000373237|PSMB2'] 95915 8302 RYLEKPMEI True NCI_RA007_Epitope_Rep1 1177.6165301458898 1177.61488490379 36.294 3 0.11846845351058397 0.001234657564093253 0.006237813152881572 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 65856 19633 LSDLLTDFV True H1975_Epitope_Rep2 1021.53317736141 1021.53208993586 81.458 2 0.11846464289339086 0.001234657564093253 0.006238355704408359 ['ENSG00000170185|ENST00000307017|USP38', 'nc|ENSG00000170185|Q8NB14-2|USP38'] 5803 12201 APEEHPVLL True PC9_epitope_Rep2 1003.5338460677498 1003.53274993586 52.242 2 0.11846196999918149 0.001234657564093253 0.006238736295622768 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 16594 9455 EENFAVEA True H1975_Epitope_Rep3 907.3923267841499 907.39122993586 41.372 2 0.11845146652072845 0.0012676107348520518 0.00624023209652908 ['ENSG00000026025|ENST00000544301|VIM'] 105709 13304 SSEQTFMYY True H1975_Epitope_Rep2 1154.4590264449798 1154.45847496793 56.303 1 0.11844781513603642 0.0012676107348520518 0.006240752172289569 ['ENSG00000115758|ENST00000234111|ODC1'] 64038 18183 LPALAGVSA True PC9_epitope_Rep1 797.46470387877 797.4641549679301 74.731 1 0.1184425716331027 0.0012676107348520518 0.006241499091289727 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 103838 7449 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 34.028 2 0.11843568758171183 0.0012676107348520518 0.006242479833079529 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 142506 20309 YYIFIPSKF True PC9_epitope_Rep4 1176.6219327961599 1176.62137496793 86.261 1 0.11842288107454658 0.0012676107348520518 0.006244304721832283 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 104687 6300 SQTSVAERL True PC9_epitope_Rep4 989.5141732523299 989.51306993586 31.294 2 0.11842034439769382 0.0012676107348520518 0.006244666252347305 ['ENSG00000171456|ENST00000375687|ASXL1'] 2500 4646 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep3 1063.46042380775 1063.45932993586 22.993 2 0.11841953534635878 0.0012676107348520518 0.006244781563696752 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 9864 13007 AYLHTTTTF True PC9_epitope_Rep3 1053.51311062317 1053.51200993586 55.06 2 0.1184157402816202 0.0012676107348520518 0.006245322489134538 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 45636 19750 IRDNFVIVY True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 81.013 2 0.11841521391998211 0.0012676107348520518 0.0062453975171261516 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 57825 7396 LEESSPKLP True H1975_Epitope_Rep2 998.5284263341399 998.5273299358599 33.391 2 0.11841484750563518 0.0012676107348520518 0.00624544974662685 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000544007.5_1_14:31028384-31077115:+|nuORF', 'G2E3|p.T361Ifs*2|1|0.42|ENSG00000092140|chr14:30605575-30605576|-/T|frameshift_variant', 'G2E3|p.G461Vfs*26|1|0.4|ENSG00000092140|chr14:30607950-30607950|G/-|frameshift_variant'] 42636 3826 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 19.733 2 0.11841279962570891 0.0012676107348520518 0.0062457416637399146 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 8377 7222 ATLNSIVAK True NCI_RA007_Epitope_Rep2 915.5389314481899 915.53782993586 32.711 2 0.11840508447848569 0.0012676107348520518 0.006246841546628215 ['ENSG00000007944|ENST00000356840|MYLIP'] 9598 12271 AYAGSGNVL True PC9_epitope_Rep1 850.41848196234 850.41793496793 52.056 1 0.11840321585481386 0.0012676107348520518 0.006247107968802241 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 89601 18070 QYPSICPRL True PC9_epitope_Rep5 1075.54845058607 1075.5473499358602 74.521 2 0.11840218099687247 0.0012676107348520518 0.006247255520184935 ['ENSG00000102699|ENST00000381989|PARP4'] 141866 15804 YVDPQFLTY True H1975_Epitope_Rep2 1144.54407639828 1144.5429699358601 65.976 2 0.11839894723424706 0.0012676107348520518 0.006247716616130766 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 114480 6675 TPYKQEINA True PC9_epitope_Rep1 1062.53457434374 1062.53346993586 30.482 2 0.11837726523403756 0.0012676107348520518 0.0062508090674243 ['ENSG00000138356|ENST00000374700|AOX1'] 98113 8774 SESFVSPEA True H1975_Epitope_Rep1 951.41854153199 951.4179949679301 38.68 1 0.1183745834003265 0.0012676107348520518 0.006251191674547354 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 93707 8315 RQVSMVQTL True NCI_RA007_Epitope_Rep4 1060.56991430664 1060.5688099358601 38.798 2 0.11836812926587231 0.0012676107348520518 0.006252112555188903 ['nc|ENSG00000111913|Q9Y4F9|RIPOR2', 'ENSG00000111913|ENST00000643898|RIPOR2'] 124745 12492 VHAQIVSTL True PC9_epitope_Rep3 966.5498304850599 966.54872993586 53.075 2 0.11836770061086763 0.0012676107348520518 0.006252173720681713 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 55057 9358 KYTHFIQSF True NCI_RA007_Epitope_Rep4 1169.5869442697697 1169.58584993586 42.85 2 0.11836665647067701 0.0012676107348520518 0.006252322713215984 ['nc|ENSG00000148288|Q8N5D6-3|GBGT1', 'ENSG00000148288|ENST00000372040|GBGT1'] 89228 8631 QVVEEIRQA True PC9_epitope_Rep5 1070.57202248162 1070.57092993586 38.143 2 0.11836352692166688 0.0012676107348520518 0.006252769301794291 ['ENSG00000121211|ENST00000240488|MND1'] 115783 8949 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4440499358602 39.376 2 0.11835650488193136 0.0012676107348520518 0.006253771464349133 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 90670 5452 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58787496793 25.999 1 0.11834638371930663 0.0012676107348520518 0.006255216199024741 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 134148 9666 VYLHDFQRF True NCI_RA007_Epitope_Rep3 1223.60874234351 1223.60710490379 45.099 3 0.11833160570589701 0.0012676107348520518 0.006257326255190459 ['ENSG00000197943|ENST00000564138|PLCG2', 'ENST00000567980.5_1_16:81819579-81955027:+|nuORF', 'ENST00000569929.5_1_16:81888133-81917132:+|nuORF', 'PLCG2|p.A308Cfs*21|1|0.35|ENSG00000197943|chr16:81891525-81891526|-/T|frameshift_variant'] 43678 10724 IHDGM[Oxidation]NLEL True PC9_epitope_Rep4 1056.49099566004 1056.4898899358602 49.004 2 0.11833102982630714 0.0012676107348520518 0.006257408495323343 ['ENSG00000198258|ENST00000586895|UBL5'] 54534 6538 KYIHSANVL True NCI_RA007_Epitope_Rep2 1043.57637958607 1043.5752899358602 30.042 2 0.11832768445359362 0.0012676107348520518 0.006257886261682445 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 64969 12370 LQFDKAINA True PC9_epitope_Rep4 1018.5447451046199 1018.54364993586 55.388 2 0.11832473440375861 0.0012676107348520518 0.0062583075998628585 ['ENSG00000140307|ENST00000396060|GTF2A2'] 86516 15827 QLANEEIAQV True PC9_epitope_Rep1 1113.56660274801 1113.56550993586 65.692 2 0.11831701380252735 0.0012676107348520518 0.0062594104185672034 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF'] 13977 7576 DRDPASGTAL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 34.089 2 0.11830801677850254 0.0012676107348520518 0.006260695801786401 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 97443 13372 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 56.545 1 0.11830512522923461 0.0012676107348520518 0.006261108965108865 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 108738 16509 SYRQVAFDF True PC9_epitope_Rep6 1131.5349086969097 1131.53380993586 75.933 2 0.11829779167424917 0.0012676107348520518 0.00626215695019587 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 41562 21313 HYTYILEVF True PC9_epitope_Rep2 1183.5913609438696 1183.59026993586 87.444 2 0.11828980421798357 0.0012676107348520518 0.006263298574063034 ['ENSG00000151012|ENST00000280612|SLC7A11'] 28120 17895 FRADDTFEAL True PC9_epitope_Rep4 1183.55095268387 1183.54984993586 76.871 2 0.11828481917948731 0.0012676107348520518 0.006264011173894941 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 5216 7843 ALPDQGIAKA True PC9_epitope_Rep4 982.5447451046199 982.54364993586 37.581 2 0.11828126163929022 0.0012676107348520518 0.006264519764428739 ['ENSG00000089289|ENST00000356413|IGBP1'] 25553 9260 FEIPTKETP True H1975_Epitope_Rep2 1060.54407639828 1060.5429699358601 40.576 2 0.11827909258353986 0.0012676107348520518 0.006264829875183829 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 75345 15582 NIRDSWEEV True PC9_epitope_Rep5 1146.5305515924601 1146.5294499358602 64.946 2 0.11827508024324432 0.0012676107348520518 0.006265403560490684 ['ENSG00000221944|ENST00000408957|TIGD1'] 35182 12537 GQYSHLVLL True NCI_RA007_Epitope_Rep4 1028.5654805491997 1028.5643899358602 55.239 2 0.11827434613998855 0.0012676107348520518 0.006265508528277612 ['ENSG00000080608|ENST00000397885|PUM3'] 48234 12738 IYQKAFDLI True NCI_RA007_Epitope_Rep3 1109.6120963884498 1109.61098993586 57.338 2 0.11826248209829207 0.0012676107348520518 0.0062672051788171465 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 107173 22034 SVIIPGMTL True PC9_epitope_Rep5 929.52558988317 929.52448993586 89.78 2 0.11826051628792349 0.0012676107348520518 0.006267486348277047 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 88371 20547 QSLAGGIIGV True PC9_epitope_Rep5 913.5232813840499 913.52218993586 84.078 2 0.11825383013821834 0.0012676107348520518 0.0062684427589330665 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 11965 16775 DHNINLVSM True PC9_epitope_Rep3 1041.4913296327702 1041.49022993586 69.671 2 0.11824765568163355 0.0012676107348520518 0.0062693261015028335 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 40299 13314 HQNQLLSSL True PC9_epitope_Rep4 1038.5458077337798 1038.54470993586 59.108 2 0.11824694275094323 0.0012676107348520518 0.006269428104043972 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 95217 17209 RVLDELTLA True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 74.203 2 0.11824283258177928 0.0012676107348520518 0.006270016197937446 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 1017 8642 AEAEALYSA True H1975_Epitope_Rep3 923.42362691243 923.42307496793 38.237 1 0.11823757815230287 0.0012676107348520518 0.006270768093922008 ['ENSG00000183891|ENST00000333610|TTC32'] 21238 14576 ERDPSPWAV True PC9_epitope_Rep3 1055.50360856863 1055.5025099358602 61.193 2 0.11823719445827151 0.0012676107348520518 0.0062708230030402426 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 104501 20575 SQMPTVIYV True PC9_epitope_Rep2 1036.5263181591597 1036.52577496793 84.573 1 0.11823405096723208 0.0012676107348520518 0.006271272874753488 ['ENSG00000121931|ENST00000369763|LRIF1'] 23889 13543 EYISTVKTL True PC9_epitope_Rep3 1052.57537652656 1052.57426993586 57.149 2 0.11823394201247148 0.0012676107348520518 0.006271288468065813 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 110948 10193 THAAQQILL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 49.849 2 0.11823152705662052 0.0012676107348520518 0.0062716340997528795 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 124768 18423 VHDEGVWAL True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 75.885 2 0.11822846414198648 0.0012676107348520518 0.006272072494864138 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 122538 11590 VGETIIDLENR True NCI_RA007_Epitope_Rep1 1257.65648038157 1257.65538993586 49.053 2 0.1182283846632394 0.0012676107348520518 0.006272083871058337 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF'] 41804 11449 IASPEGQDYLK True PC9_epitope_Rep5 1219.6084675599898 1219.60736993586 49.036 2 0.11821422242283194 0.0012676107348520518 0.006274111305057977 ['ENSG00000100220|ENST00000216038|RTCB'] 85866 17874 QHFDSVMQL True PC9_epitope_Rep1 1103.5069796969099 1103.50588993586 73.546 2 0.11821082706453366 0.0012676107348520518 0.006274597471703658 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 88827 19383 QVADILFQTA True PC9_epitope_Rep6 1104.5815245361598 1104.5804299358601 87.208 2 0.11820137607346363 0.0012676107348520518 0.006275950911491018 ['ENSG00000114491|ENST00000232607|UMPS', 'UMPS|p.I201Lfs*14|1|0.09|ENSG00000114491|chr3:124737857-124737858|-/CTCCTGG|frameshift_variant'] 111001 14522 THASQIELL True PC9_epitope_Rep5 1010.5396597241798 1010.53856993586 60.857 2 0.11819960696713142 0.0012676107348520518 0.006276204289958644 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 135108 9454 WEEETVPTT True H1975_Epitope_Rep1 1090.4818700645399 1090.48076993586 41.282 2 0.1181980751481411 0.0012676107348520518 0.006276423691239102 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 141350 5188 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.46057496793 25.028 1 0.11819800651764005 0.0012676107348520518 0.00627643352130902 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 108318 8354 SYISRTNQL True PC9_epitope_Rep4 1080.5563724174801 1080.55526993586 39.591 2 0.1181683270493728 0.0012676107348520518 0.006280685971280163 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 20040 13010 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep1 1154.4801561928198 1154.47957496793 55.125 1 0.11816710043567714 0.0012676107348520518 0.006280861779890129 ['ENSG00000182195|ENST00000370526|LDOC1'] 70559 19863 LWAPRPFNL True PC9_epitope_Rep4 1112.61309944796 1112.6120099358602 84.533 2 0.11816491520032363 0.0012676107348520518 0.00628117499811501 ['ENSG00000174231|ENST00000304992|PRPF8'] 40425 17899 HQYDGLVEL True PC9_epitope_Rep3 1072.5189242795998 1072.5178299358602 74.05 2 0.11816466941203567 0.0012676107348520518 0.006281210228852079 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 56219 6254 LC[Carbamidomethyl]FSTAQHAS True NCI_RA007_Epitope_Rep5 1120.4971435686298 1120.4960499358601 30.732 2 0.11816262599135295 0.0012676107348520518 0.006281503135604498 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000595804.5_1_19:39327364-39328165:-|nuORF', 'ENST00000421896.1_1_6:7481329-7481452:-|nuORF', 'ENST00000595443.5_1_19:39327364-39327562:-|nuORF'] 75276 7414 NIILEEGK True NCI_RA007_Epitope_Rep1 914.5072969667399 914.50618993586 32.835 2 0.11815849274039619 0.0012676107348520518 0.0062820956422143 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 74993 8804 NHQGTYVL True PC9_epitope_Rep5 930.4559301002199 930.45482993586 38.808 2 0.11814864113094975 0.0012676107348520518 0.006283508102159307 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 111483 11523 THVSDTSVVL True PC9_epitope_Rep1 1056.54513902744 1056.5440499358601 49.202 2 0.11814827925292788 0.0012676107348520518 0.0062835599917779456 ['ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 4171 16812 AHTTVIIDL True PC9_epitope_Rep2 981.5494961318899 981.54838993586 69.916 2 0.11814798431343852 0.0012676107348520518 0.006283602283402364 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 128406 7560 VPRPPDTVST True PC9_epitope_Rep2 1067.56112344475 1067.56002993586 34.449 2 0.11814431412748887 0.0012676107348520518 0.006284128577691352 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 48867 8393 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54861496793 37.267 1 0.1181421115062979 0.0012676107348520518 0.006284444447967282 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 105032 14163 SRDMTMFVT True PC9_epitope_Rep4 1086.48380172418 1086.4827099358602 62.383 2 0.11814133811819132 0.0012676107348520518 0.006284555360546743 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 104219 10576 SQHGVIIQL True NCI_RA007_Epitope_Rep5 993.5607295219299 993.55962993586 47.315 2 0.11813421889507526 0.0012676107348520518 0.006285576427054911 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 9589 20914 AYAENIALL True PC9_epitope_Rep3 976.5229470308799 976.52184993586 85.723 2 0.1181244929739224 0.0012676107348520518 0.006286971617552984 ['ENSG00000196455|ENST00000356763|PIK3R4'] 3497 12289 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep3 1042.5658747883201 1042.56476993586 52.448 2 0.11810824366081489 0.0012676107348520518 0.006289303266667506 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 126472 18331 VLLGKVYVV True PC9_epitope_Rep2 988.63210355704 988.63100993586 75.839 2 0.11810034693896805 0.0012676107348520518 0.006290436688602411 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 128773 17463 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 72.422 2 0.11809870635619574 0.0012676107348520518 0.006290672187548525 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 58071 9037 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 39.714 2 0.11808724732139957 0.0012924535075752137 0.006292317324697119 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 99883 19079 SILSEVQQA True PC9_epitope_Rep5 973.50802524273 973.50692993586 78.417 2 0.11808417098478778 0.0012924535075752137 0.0062927590559268935 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 104231 14405 SQHGVIIQL True PC9_epitope_Rep4 993.5607295219299 993.56018496793 63.318 1 0.11807286979764867 0.0012924535075752137 0.006294382052994627 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 46173 16348 ISLPKGVVEV True PC9_epitope_Rep6 1039.62774645259 1039.62664993586 75.259 2 0.118070240035231 0.0012924535075752137 0.006294759779484314 ['ENSG00000149257|ENST00000358171|SERPINH1'] 33473 13664 GLATDVQTV True PC9_epitope_Rep2 902.47091145802 902.46980993586 57.85 2 0.1180654473520237 0.0012924535075752137 0.006295448234372664 ['ENSG00000277791|ENST00000619426|PSMB3'] 137931 5997 YFDPANGK True NCI_RA007_Epitope_Rep2 910.4184819623399 910.41738993586 27.938 2 0.11806087156043271 0.0012924535075752137 0.006296105601877391 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 136985 16766 YAITTLHNL True PC9_epitope_Rep3 1044.5603951687601 1044.55928993586 69.635 2 0.11805634980940401 0.0012924535075752137 0.006296755271507615 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant', 'ENSG00000173801|ENST00000393931|JUP'] 29766 18874 FVNVVPTFGK True PC9_epitope_Rep3 1106.6124307416198 1106.61132993586 77.821 2 0.11805290158840072 0.0012924535075752137 0.0062972507439348685 ['ENSG00000149806|ENST00000529639|FAU'] 41031 19369 HTILDLPAV True PC9_epitope_Rep4 977.55458151233 977.55348993586 82.614 2 0.11804613499669836 0.0012924535075752137 0.006298223141107457 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 38069 11893 HAVGDIPGV True PC9_epitope_Rep3 863.45011644379 863.44900993586 50.766 2 0.11803725566379165 0.0012924535075752137 0.0062994993729967586 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 96208 15181 RYPTSIASL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 63.215 2 0.11802746263078505 0.0012924535075752137 0.006300907223755459 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 33368 11949 GKVQIPIM[Oxidation]L True NCI_RA007_Epitope_Rep3 1013.5943385297699 1013.59324993586 54.127 2 0.11801407850122356 0.0012924535075752137 0.006302831827950768 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 12037 17450 DHSPDLYSL True PC9_epitope_Rep3 1045.47163973401 1045.4705499358602 72.295 2 0.11800763279361388 0.0012924535075752137 0.00630375890884038 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 65358 9911 LRDQGGVVL True PC9_epitope_Rep2 955.5450794577898 955.5439899358599 43.455 2 0.11800716481726346 0.0012924535075752137 0.006303826222671756 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 10099 16176 AYTPFHAVL True PC9_epitope_Rep6 1017.5283667644899 1017.52726993586 74.577 2 0.1179999494081009 0.0012924535075752137 0.006304864177517785 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 58612 4755 LEQTPEQQAA True H1975_Epitope_Rep2 1113.53021723929 1113.52912993586 23.379 2 0.11799907217004318 0.0012924535075752137 0.006304990381782146 ['ENST00000560311.1_1_14:24634973-24635402:+|nuORF', 'ENST00000557894.5_1_14:24634074-24635402:+|nuORF', 'ENST00000561415.1_1_14:24633725-24635402:+|nuORF', 'ENSG00000213928|ENST00000396864|IRF9'] 138061 13294 YGEPGEVFINK True PC9_epitope_Rep4 1251.6135529404298 1251.61244993586 59.032 2 0.11799663119392328 0.0012924535075752137 0.006305341566909061 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 29293 19875 FVCDIRPEI True PC9_epitope_Rep3 1090.5481162329 1090.5470099358602 81.687 2 0.11798877054339939 0.0012924535075752137 0.006306472614306372 ['ENSG00000136888|ENST00000374050|ATP6V1G1'] 896 5673 ADLDVSGPK True NCI_RA007_Epitope_Rep2 900.4552613938799 900.45416993586 26.68 2 0.11798774555395436 0.0012924535075752137 0.006306620111787816 ['ENSG00000124942|ENST00000378024|AHNAK'] 48424 22644 IYVPVSLGF True PC9_epitope_Rep2 993.55351888317 993.55242993586 92.594 2 0.11798173249029556 0.0012924535075752137 0.0063074854681472075 ['ENSG00000172818|ENST00000335987|OVOL1'] 76151 12806 NMYGKVVTV True PC9_epitope_Rep1 1009.52665251233 1009.52554993586 54.132 2 0.11798050184344994 0.0012924535075752137 0.006307662588145508 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 136839 14782 YADGESFLGY True H1975_Epitope_Rep2 1120.4713053808398 1120.47020993586 62.018 2 0.11797662270229277 0.0012924535075752137 0.006308220922572336 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 141796 20705 YVDDFGVSV True PC9_epitope_Rep1 999.4549270407099 999.4543749679301 84.468 1 0.11797640741158003 0.0012924535075752137 0.006308251911309956 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 116673 8421 TVAVPLVGK True NCI_RA007_Epitope_Rep5 882.5538532363399 882.55274993586 39.069 2 0.11797558157338008 0.0012924535075752137 0.006308370783039904 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 121838 10744 VFPEKGYSF True NCI_RA007_Epitope_Rep4 1072.5229470308798 1072.52184993586 48.174 2 0.11797345632223318 0.0012924535075752137 0.0063086767032161225 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 76798 6051 NRAPNTAEL True PC9_epitope_Rep1 984.4988575413599 984.49776993586 28.089 2 0.11797344207417612 0.0012924535075752137 0.006308678754207502 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 17272 15206 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 63.753 2 0.11797098221342972 0.0012924535075752137 0.006309032858063111 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 76058 11056 NMDNM[Oxidation]FESY True H1975_Epitope_Rep3 1165.40561135357 1165.40450993586 47.617 2 0.1179674619261984 0.0012924535075752137 0.006309539646972579 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 25737 6928 FESSGIHVA True H1975_Epitope_Rep3 945.45559574705 945.45448993586 31.609 2 0.11796529017600407 0.0012924535075752137 0.006309852317069586 ['ENSG00000084774|ENST00000264705|CAD'] 140520 13572 YRMDGHIQL True PC9_epitope_Rep5 1131.5495132152298 1131.54787490379 57.228 3 0.1179581181806311 0.0012924535075752137 0.006310884987129804 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 1802 5490 AEHLGEAEVA True H1975_Epitope_Rep2 1024.48253877088 1024.4814499358602 26.13 2 0.11795042720345625 0.0012924535075752137 0.006311992566494163 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 38510 5173 HERPEFIA True NCI_RA007_Epitope_Rep3 997.4981292653698 997.49702993586 27.339 2 0.11794567436589548 0.0012924535075752137 0.0063126771183841 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 109097 17759 TALLKIEGV True PC9_epitope_Rep3 942.57498260374 942.5744349679301 73.508 1 0.1179443842665822 0.0012924535075752137 0.006312862944058112 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 26891 21757 FLDGNELTL True PC9_epitope_Rep1 1020.51277627 1020.51227496793 88.522 1 0.11794232416287956 0.0012924535075752137 0.006313159692076453 ['ENSG00000213719|ENST00000375784|CLIC1'] 35813 9666 GTITTFEHA True PC9_epitope_Rep2 975.4661604307499 975.46506993586 42.518 2 0.1179417700315736 0.0012924535075752137 0.006313239514342146 ['ENSG00000167658|ENST00000309311|EEF2'] 113740 4887 [Acetylation]-TM[Oxidation]DKSELVQK True NCI_RA007_Epitope_Rep2 1235.60675400457 1235.6056499358601 23.632 2 0.11793342950628281 0.0012924535075752137 0.006314441080545329 ['ENSG00000166913|ENST00000353703|YWHAB'] 74599 21829 NGFPVFATV True PC9_epitope_Rep5 950.48616759934 950.48506993586 88.997 2 0.1179318953753602 0.0012924535075752137 0.006314662117246433 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 106367 20782 STIAILNSV True PC9_epitope_Rep5 916.5229470308801 916.52239496793 84.99 1 0.11792850159031662 0.0012924535075752137 0.006315151118627252 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 36613 19646 GVIAEILRGV True PC9_epitope_Rep6 1025.6233297784897 1025.62222993586 88.227 2 0.11792777251977651 0.0012924535075752137 0.00631525617325911 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 105466 20205 SRVPLLLPL True PC9_epitope_Rep4 1006.65390163078 1006.65280993586 85.856 2 0.11792761250404936 0.0012924535075752137 0.006315279230780305 ['ENSG00000168140|ENST00000304735|VASN'] 21359 13026 ERFSTSQVL True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 55.109 2 0.11792584268950415 0.0012924535075752137 0.006315534258285561 ['ENSG00000181481|ENST00000328381|RNF135'] 115634 8615 TRVSQINTL True PC9_epitope_Rep2 1030.5771078620598 1030.5760099358602 38.499 2 0.11790627084769559 0.0012924535075752137 0.0063183551991326916 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 97760 8052 SEITDTVAA True H1975_Epitope_Rep2 905.43419159613 905.43364496793 35.92 1 0.1178988573933995 0.0012924535075752137 0.006319424040246426 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 86521 16054 QLAQFVHEV True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 66.904 2 0.11789824772331707 0.0012924535075752137 0.006319511947790405 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000535158.5_1_12:31227017-31242187:+|nuORF', 'ENST00000536265.5_1_12:31227017-31242486:+|nuORF', 'ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF', 'ENST00000542244.5_1_12:31237807-31242486:+|nuORF'] 126633 16708 VLNEYFHNV True PC9_epitope_Rep3 1133.5505587610498 1133.54946993586 69.401 2 0.11789722174093173 0.0012924535075752137 0.006319659885558519 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 137775 13644 YEPPVQESV True PC9_epitope_Rep5 1046.49204082542 1046.49094993586 57.504 2 0.1178923786423862 0.0012924535075752137 0.0063203582639495305 ['ENSG00000145425|ENST00000274065|RPS3A'] 137688 6450 YEKEGEFVA True H1975_Epitope_Rep2 1070.4920408254197 1070.49094993586 29.727 2 0.1178918255529819 0.0012924535075752137 0.006320438024633967 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 32569 6660 GGGQIIPTAR True PC9_epitope_Rep6 968.5403284305199 968.53922993586 34.358 2 0.11788947723570574 0.0012924535075752137 0.006320776684951445 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 7995 6914 ATDINGDDY True H1975_Epitope_Rep2 982.3879696796998 982.3874249679301 31.515 1 0.11787382285643451 0.0012924535075752137 0.006323034717962186 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 120262 6596 VEDARGFTP True H1975_Epitope_Rep2 990.4770594676199 990.47596993586 30.282 2 0.11786355659482055 0.0012924535075752137 0.006324515979930038 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 93397 5478 RQAQAAGVSL True NCI_RA007_Epitope_Rep3 999.5461420869498 999.54504993586 28.555 2 0.11785877127822353 0.0012924535075752137 0.006325206542235867 ['ENSG00000130052|ENST00000374599|STARD8', 'nc|ENSG00000130052|Q92502|STARD8'] 11147 11820 DDGLFSGD True H1975_Epitope_Rep1 824.31882749072 824.31827496793 50.46 1 0.11785086017473592 0.0012924535075752137 0.006326348343551444 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 95087 17851 RVADDVFTL True PC9_epitope_Rep4 1034.53965972418 1034.53856993586 76.701 2 0.1178498315598856 0.0012924535075752137 0.006326496817210214 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 47941 11437 IYIKQIKTF True PC9_epitope_Rep6 1152.6906810623198 1152.68958993586 55.055 2 0.11784671973924687 0.0012924535075752137 0.006326946008329601 ['ENSG00000103479|ENST00000262133|RBL2'] 108590 18359 SYPDLLPTF True NCI_RA007_Epitope_Rep4 1051.52261267771 1051.5215099358602 79.424 2 0.11784459051781218 0.0012924535075752137 0.006327253379216367 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 3519 9653 AGLQFPVGR True NCI_RA007_Epitope_Rep3 943.5239500903898 943.52284993586 45.048 2 0.11784404066389281 0.0012924535075752137 0.00632733275758261 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 86087 9062 QHSTAQLNL True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 39.802 2 0.11784280875503006 0.0012924535075752137 0.006327510602726176 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 97947 10475 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.4652749679301 45.311 1 0.11783957807345692 0.0012924535075752137 0.006327977024830368 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 69807 14437 LVGIDIFTGK True H1975_Epitope_Rep3 1061.61209638845 1061.61098993586 60.886 2 0.11783749404459136 0.0012924535075752137 0.006328277919400339 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 21104 20308 ERADLIAYL True PC9_epitope_Rep2 1062.57095985246 1062.5698699358602 83.538 2 0.11783095676514228 0.0012924535075752137 0.0063292218700309495 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 45690 13822 IRKPYIWEY True PC9_epitope_Rep6 1266.67609362734 1266.6744449037901 64.97 3 0.11782475316089441 0.0012924535075752137 0.006330117766464723 ['ENSG00000136628|ENST00000366923|EPRS1'] 999 7193 AEAAPPLRP True H1975_Epitope_Rep3 920.50796567308 920.50686993586 32.643 2 0.11781852360706378 0.0012924535075752137 0.006331017534732464 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 1077 8024 AEAIKAWTA True H1975_Epitope_Rep2 959.5076313199099 959.50652993586 35.812 2 0.11780897157783639 0.0012924535075752137 0.0063323974281384735 ['ENST00000565493.1_1_20:34638316-34638640:-|nuORF'] 8221 9427 ATGDMSGLLK True NCI_RA007_Epitope_Rep1 991.5008316873099 991.49972993586 40.663 2 0.11780742253326115 0.0012924535075752137 0.0063326212319030906 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 21523 12450 ERMPEQIRL True PC9_epitope_Rep1 1170.61792712822 1170.61682993586 52.754 2 0.1178059755923455 0.0012924535075752137 0.006332830290835918 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 97838 12086 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42760993586 51.571 2 0.11780546433587565 0.0012924535075752137 0.006332904160512785 ['ENSG00000126247|ENST00000246533|CAPNS1'] 64068 7857 LPASNLAGKEA True PC9_epitope_Rep5 1069.57677350889 1069.57566993586 35.165 2 0.11780380214604731 0.0012924535075752137 0.006333144330365717 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 28567 11477 FSEVNMQEY True H1975_Epitope_Rep3 1145.46992548185 1145.4688299358602 49.269 2 0.11780360429789287 0.0012924535075752137 0.006333172918041768 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 87884 13901 QRIDEFESM True PC9_epitope_Rep2 1153.5073736197298 1153.50626993586 58.751 2 0.11779483586545993 0.0012924535075752137 0.006334440021516546 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 99190 19206 SHLDYDITL True PC9_epitope_Rep1 1075.5185899264302 1075.51807496793 78.671 1 0.1177911407690921 0.0012924535075752137 0.006334974064288523 ['ENSG00000163960|ENST00000296328|UBXN7'] 40508 11168 HRDSIVETL True PC9_epitope_Rep1 1068.5563724174801 1068.55526993586 47.843 2 0.11779106257193714 0.0012924535075752137 0.006334985366396045 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54579003-54603452:-|nuORF'] 8661 6430 AVAEPLPSPR True NCI_RA007_Epitope_Rep5 1035.5712942056298 1035.57018993586 31.401 2 0.11778817640646039 0.0012924535075752137 0.006335402527699976 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 73909 16805 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.5431349679301 69.889 1 0.1177763264860497 0.0012924535075752137 0.0063371155749440584 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 9806 9182 AYLEAHETF True NCI_RA007_Epitope_Rep5 1079.4923751785898 1079.4912699358601 41.969 2 0.11777620487045165 0.0012924535075752137 0.006337133158267314 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 130053 11521 VSDAANVMVY True H1975_Epitope_Rep2 1067.49574630687 1067.49464993586 49.373 2 0.11776827367615782 0.0012924535075752137 0.00633827996209274 ['ENSG00000115548|ENST00000312912|KDM3A', 'ENST00000441719.5_1_2:86711112-86716803:+|nuORF'] 8898 16832 AVFPSIVGR True PC9_epitope_Rep3 944.5443511817999 944.54324993586 69.897 2 0.11776642078328049 0.0012924535075752137 0.006338547908582952 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 18843 12032 ELDPNNAVYY True H1975_Epitope_Rep3 1196.53496826656 1196.5338699358601 51.442 2 0.11776631287868365 0.0012924535075752137 0.006338563512986379 ['ENSG00000197860|ENST00000381007|SGTB'] 65367 8946 LRDQSAVVV True PC9_epitope_Rep5 985.5556441414899 985.55454993586 39.354 2 0.1177645661104309 0.0012924535075752137 0.006338816123524528 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 133953 21835 VYILQPEVI True PC9_epitope_Rep1 1072.6168474157198 1072.61627496793 88.798 1 0.11775737695804872 0.0012924535075752137 0.006339855892816974 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 21407 16511 ERINNINIL True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 68.752 2 0.1177556853864205 0.0012924535075752137 0.006340100569479123 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 87819 8727 QRELGGTAL True PC9_epitope_Rep1 943.5086939490698 943.50758993586 38.405 2 0.11775548171911379 0.0012924535075752137 0.006340130029470913 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 77604 6626 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.4608649679301 30.395 1 0.11775158303213916 0.0012924535075752137 0.006340693990982035 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 43855 12221 IHSSETLTL True PC9_epitope_Rep1 999.52367530687 999.52256993586 51.867 2 0.11774820883460103 0.0012924535075752137 0.006341182122331233 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 138583 19300 YIDIDPLLY True H1975_Epitope_Rep1 1123.58012755383 1123.5795749679298 80.407 1 0.11774353142552926 0.0012924535075752137 0.006341858844501928 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 71986 5934 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 27.811 1 0.11773519804032907 0.0012924535075752137 0.006343064683417566 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 68069 17442 LTDLVDDNYFY True H1975_Epitope_Rep2 1376.6136125100802 1376.61250993586 72.382 2 0.11773074306198769 0.0012924535075752137 0.00634370940936342 ['ENSG00000174231|ENST00000304992|PRPF8'] 54514 15502 KYIEGVSDF True PC9_epitope_Rep5 1056.51277627 1056.51166993586 64.638 2 0.11772900874242051 0.0012924535075752137 0.006343960417929253 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 104464 13781 SQLPPLREI True PC9_epitope_Rep6 1051.60259433391 1051.6014899358602 64.81 2 0.11772821910221963 0.0012924535075752137 0.00634407470598599 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 9161 11135 AVLDYVMTR True NCI_RA007_Epitope_Rep3 1066.5481162329 1066.5470099358602 50.902 2 0.1177271308422683 0.0012924535075752137 0.006344232217863156 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant', 'ENSG00000139826|ENST00000375898|ABHD13'] 21405 17323 ERINNINIL True PC9_epitope_Rep1 1097.61930702721 1097.61820993586 71.447 2 0.11772699863682774 0.0012924535075752137 0.006344251353189688 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 66 13020 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 55.2 1 0.11772680000352641 0.0012924535075752137 0.006344280103345777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 9924 20217 AYLPVNESF True PC9_epitope_Rep2 1038.5022115863 1038.50110993586 83.182 2 0.11772645569254085 0.0012924535075752137 0.00634432993917004 ['ENSG00000167658|ENST00000309311|EEF2'] 84495 21804 QALSPLLSV True PC9_epitope_Rep1 926.5436824754601 926.54258993586 88.687 2 0.11772538831655831 0.0012924535075752137 0.006344484434375002 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 26547 18194 FIINGIEKV True PC9_epitope_Rep2 1031.60153170475 1031.6004299358601 75.29 2 0.1177214165861382 0.0012924535075752137 0.00634505934675226 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 77819 19958 NVDEGIYQL True PC9_epitope_Rep5 1049.5029398622898 1049.5023749679299 81.821 1 0.11771598982156838 0.0012924535075752137 0.006345844958971528 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ENST00000474428.6_1_1:155922555-155932010:-|nuORF'] 71717 10226 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42717496793 44.277 1 0.11771183771603419 0.0012924535075752137 0.00634644610759306 ['ENSG00000026025|ENST00000544301|VIM'] 98225 4277 SETVMVHQA True NCI_RA007_Epitope_Rep3 1000.4647805317599 1000.46368993586 23.537 2 0.11770993454769892 0.0012924535075752137 0.006346721669952884 ['ENSG00000100647|ENST00000342745|SUSD6'] 29395 16516 FVDPNGKISL True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 68.529 2 0.1176981385592215 0.0012924535075752137 0.006348429887339475 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 126845 15347 VLQALEGLK True PC9_epitope_Rep1 969.5858816406098 969.58478993586 63.85 2 0.1176971100578043 0.0012924535075752137 0.006348578849367184 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 132374 16477 VVAEELENV True PC9_epitope_Rep2 1000.50769088956 1000.50658993586 68.62 2 0.11769567369520158 0.0012924535075752137 0.006348786889280554 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.I97V|1|0.22|ENSG00000167196|chr15:75913212-75913212|A/G|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 11982 18072 DHNYQSYIL True PC9_epitope_Rep5 1151.52473793603 1151.52364993586 74.528 2 0.11767946248249347 0.0012924535075752137 0.006351135349660046 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 96011 15493 RYLPDTLLL True NCI_RA007_Epitope_Rep2 1102.63864548946 1102.63754993586 64.968 2 0.11767889115212117 0.0012924535075752137 0.006351218131680967 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 103531 12680 SPRPPLISV True PC9_epitope_Rep6 964.57056592964 964.56946993586 60.245 2 0.11767843891708098 0.0012924535075752137 0.006351283658315163 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 48065 23025 IYMDTLNIF True PC9_epitope_Rep2 1128.5525329069999 1128.5514299358601 94.058 2 0.11767288914191494 0.0012924535075752137 0.006352087847081598 ['ENSG00000165678|ENST00000372134|GHITM'] 54762 18005 KYNANFVTF True PC9_epitope_Rep1 1102.54474510462 1102.54364993586 74.049 2 0.11766719168871727 0.0012924535075752137 0.006352913538270046 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 90602 8065 REMGQFYEA True H1975_Epitope_Rep3 1129.4862442523297 1129.4851499358601 35.996 2 0.1176541284136806 0.0012924535075752137 0.006354807100051793 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.L649Wfs*7|1|0.08|ENSG00000106608|chr7:43877517-43877517|A/-|frameshift_variant'] 124931 16133 VHSEQVFAL True PC9_epitope_Rep1 1028.5290950404797 1028.5279899358602 66.871 2 0.11762492081565472 0.0012924535075752137 0.006359042819800664 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 21680 5700 ERSGVNSEL True PC9_epitope_Rep3 989.47778774361 989.47668993586 26.997 2 0.1176214489920491 0.0012924535075752137 0.006359546490510595 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 28539 12858 FSENERLI True PC9_epitope_Rep2 1006.5083595959 1006.50726993586 54.759 2 0.11761284705393081 0.0012924535075752137 0.0063607945739280365 ['ENST00000502732.5_1_1:179076600-179076849:-|nuORF'] 97248 3962 SEADKIKVA True NCI_RA007_Epitope_Rep4 959.52876068731 959.52766993586 21.479 2 0.11761194629813526 0.0012924535075752137 0.006360925281339039 ['ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000466147.5_1_3:49062090-49062580:-|nuORF', 'ENST00000484872.1_1_3:49061926-49062670:-|nuORF'] 43241 23222 IFLSQPILL True PC9_epitope_Rep1 1042.64266824074 1042.6415699358602 94.122 2 0.11760849861357452 0.0012924535075752137 0.006361425594182532 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 49299 3157 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 16.628 2 0.11760476379849669 0.0012924535075752137 0.006361967617394119 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 11811 5528 DHFASVHSV True PC9_epitope_Rep6 997.46174375665 997.46064993586 29.27 2 0.11760083968997417 0.0012924535075752137 0.006362537160689284 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 73336 9601 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4690749679298 41.906 1 0.11759896489298767 0.0012924535075752137 0.006362809285386592 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 128846 5293 VQDENVRGV True PC9_epitope_Rep5 1014.5094222250598 1014.50832993586 25.373 2 0.11759673895662492 0.0012924535075752137 0.006363132392293036 ['ENSG00000110536|ENST00000326674|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-2|PTPMT1', 'ENST00000534775.1_1_11:47587445-47593178:+|nuORF', 'ENST00000426530.2_1_11:47587445-47593178:+|nuORF'] 109768 9547 TEDQVIYAA True H1975_Epitope_Rep2 1008.4763907612798 1008.47528993586 41.694 2 0.1175941798305668 0.0012924535075752137 0.006363503883263813 ['ENSG00000081177|ENST00000685843|EXD2', 'nc|ENSG00000081177|Q9NVH0-2|EXD2'] 21389 11069 ERIGETPEL True PC9_epitope_Rep4 1042.5294889632999 1042.52838993586 50.354 2 0.1175935581220363 0.0012924535075752137 0.006363594135663149 ['ENSG00000168806|ENST00000305641|LCMT2'] 103922 11402 SQANIAQVL True NCI_RA007_Epitope_Rep3 942.5134449763399 942.51234993586 51.972 2 0.11759009267738102 0.0012924535075752137 0.006364097231376135 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 109106 17623 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.5744349679301 72.798 1 0.11758908058679238 0.0012924535075752137 0.0063642441688733006 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 140541 4510 YRPGTVALR True NCI_RA007_Epitope_Rep3 1031.5876129761098 1031.58650993586 24.592 2 0.1175879971494703 0.0012924535075752137 0.00636440146830511 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 124481 6666 VGVNGFGR True NCI_RA007_Epitope_Rep2 804.4242360491198 804.42312993586 30.54 2 0.11758544934036196 0.0012924535075752137 0.006364771388266601 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 75029 20007 NHSELAILL True PC9_epitope_Rep5 1008.5603951687599 1008.55928993586 82.012 2 0.11758370539616822 0.0012924535075752137 0.006365024606031322 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF'] 39290 14717 HIPDVITYL True H1975_Epitope_Rep3 1069.58079626017 1069.5796899358602 61.983 2 0.1175764671270779 0.0012924535075752137 0.006366075695410375 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 47072 4999 ITSPVVTQK True NCI_RA007_Epitope_Rep4 971.56514619603 971.56404993586 25.709 2 0.1175754548155268 0.0012924535075752137 0.00636622270948707 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR', 'ENST00000504466.1_1_5:74645886-74647190:+|nuORF'] 115346 20119 TRIGVMSLI True PC9_epitope_Rep2 988.5739370579199 988.57282993586 82.796 2 0.1175708693426257 0.0012924535075752137 0.006366888681327887 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 29421 11744 FVDSSVGYY True H1975_Epitope_Rep3 1035.45492704071 1035.4543749679299 50.316 1 0.11756987823625119 0.0012924535075752137 0.006367032633727467 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'ENST00000492816.6_1_2:216257645-216258011:-|nuORF'] 49025 11867 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 52.303 2 0.11756348188314518 0.0012924535075752137 0.006367961742821561 ['ENSG00000197747|ENST00000368811|S100A10'] 2572 6257 AEQTMSHLP True H1975_Epitope_Rep2 1012.46478053176 1012.46368993586 29.022 2 0.11756243875085376 0.0012924535075752137 0.0063681132766379945 ['ENSG00000173914|ENST00000310046|RBM4B'] 47493 16238 IVQDTLTAV True PC9_epitope_Rep3 958.53351171458 958.53240993586 67.597 2 0.11756111598320837 0.0012924535075752137 0.0063683054375933855 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 117990 6578 TYDNVHQQF True NCI_RA007_Epitope_Rep5 1150.5043368446202 1150.5032299358602 31.964 2 0.11755976232843328 0.0012924535075752137 0.006368502091427203 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 105033 15652 SRDMTMFVT True PC9_epitope_Rep5 1086.48380172418 1086.4827099358602 65.217 2 0.11755778288366692 0.0012924535075752137 0.006368789668306196 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 63084 19148 LLQNNLPAV True PC9_epitope_Rep3 980.5654805492 980.56438993586 78.872 2 0.11755669757624886 0.0012924535075752137 0.006368947348859512 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 14600 9423 DTYLSHFNPR True NCI_RA007_Epitope_Rep1 1248.58873517492 1248.5870849037901 40.647 3 0.11755552013203906 0.0012924535075752137 0.00636911841994796 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 109724 3511 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 18.356 2 0.1175550125965764 0.0012924535075752137 0.006369192161250076 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 99598 7549 SIFDGRVVAK True NCI_RA007_Epitope_Rep5 1090.61349337078 1090.6123899358602 35.724 2 0.11755392426578883 0.0012924535075752137 0.006369350290795832 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 103222 9134 SPKQILDPA True PC9_epitope_Rep5 967.5338460677499 967.53274993586 40.079 2 0.11755208337548156 0.0012924535075752137 0.006369617772542889 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 21330 14816 ERFEKTFQL True PC9_epitope_Rep1 1196.6189726740397 1196.6178699358602 61.81 2 0.11754742145493181 0.0012924535075752137 0.00637029519950828 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 88860 8238 QVDLNQQQY True H1975_Epitope_Rep2 1134.5305515924601 1134.5294499358602 36.639 2 0.11754567783465895 0.0012924535075752137 0.0063705485842297785 ['ENSG00000114030|ENST00000344337|KPNA1'] 91709 7358 RKAYWQVHL True NCI_RA007_Epitope_Rep3 1199.65636124227 1199.65471490379 36.066 3 0.11754133117515046 0.0012924535075752137 0.006371180288070834 ['ENSG00000117984|ENST00000236671|CTSD', 'ENST00000497544.2_2_11:1775127-1776230:-|nuORF'] 103710 5041 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 27.019 2 0.11753983609194389 0.0012924535075752137 0.006371397583925633 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 108037 18542 SYADQMFLL True NCI_RA007_Epitope_Rep4 1086.50558271458 1086.5044899358602 80.233 2 0.11753458695071699 0.0012924535075752137 0.006372160552889529 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 1391 7136 AEEEAAVVAA True H1975_Epitope_Rep3 958.4607406971397 958.4596499358599 32.42 2 0.11752793488850566 0.0012924535075752137 0.006373127565930969 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 32764 8747 GHDASQITL True PC9_epitope_Rep4 940.46140940348 940.46030993586 41.152 2 0.11752666956759789 0.0012924535075752137 0.006373311522333544 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 84907 6145 QEDDRQLIA True H1975_Epitope_Rep2 1086.53055159246 1086.5294499358602 28.609 2 0.11752463380274612 0.0012924535075752137 0.006373607499195025 ['ENSG00000137628|ENST00000393743|DDX60'] 89530 16597 QYLNKNALTTL True PC9_epitope_Rep5 1277.6979512707298 1277.6968499358602 68.845 2 0.11752422405979075 0.0012924535075752137 0.006373667072739721 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF'] 1546 9948 AEEPWGEEA True H1975_Epitope_Rep2 1016.4087051242799 1016.4081749679301 43.255 1 0.11752013192525503 0.0012924535075752137 0.006374262068084301 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 140179 14083 YQTEIGQTL True PC9_epitope_Rep6 1051.51858992643 1051.51748993586 66.043 2 0.11751913552926722 0.0012924535075752137 0.006374406952002382 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 1875 10913 AEIEELTASA True H1975_Epitope_Rep2 1032.4975201286798 1032.49642993586 47.007 2 0.11751832696268309 0.0012924535075752137 0.006374524526385415 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 85128 7478 QELPTQPEA True NCI_RA007_Epitope_Rep4 1011.48728979815 1011.48618993586 35.41 2 0.11751263170084274 0.0012924535075752137 0.006375352739285036 ['nc|ENSG00000059122|Q4VC44-3|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-4|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-2|FLYWCH1', 'ENSG00000059122|ENST00000253928|FLYWCH1'] 76730 18595 NQTVVRVFL True PC9_epitope_Rep5 1074.61857875122 1074.61748993586 76.551 2 0.11751182133149968 0.0012924535075752137 0.0063754705928383976 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 9595 18869 AYAENIALL True PC9_epitope_Rep6 976.5229470308799 976.52184993586 85.228 2 0.11751034558164651 0.0012924535075752137 0.006375685219393786 ['ENSG00000196455|ENST00000356763|PIK3R4'] 53451 6956 KRFDDKYTL True PC9_epitope_Rep4 1184.6189726740397 1184.61733490379 33.991 3 0.11750237486400482 0.0012924535075752137 0.006376844567087429 ['ENSG00000118363|ENST00000263672|SPCS2'] 30172 12102 FYQEHPDL True PC9_epitope_Rep3 1047.4661604307498 1047.4650699358601 51.591 2 0.11750072619810716 0.0012924535075752137 0.006377084392574961 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 61979 16082 LLDPASFEY True H1975_Epitope_Rep1 1053.50187723313 1053.50137496793 67.201 1 0.11749838606746238 0.0012924535075752137 0.006377424818030367 ['ENSG00000105397|ENST00000525621|TYK2'] 3917 8578 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 40.475 2 0.1174920290829529 0.0012924535075752137 0.006378349675974618 ['ENSG00000075618|ENST00000382361|FSCN1'] 96431 17111 SAAFPGASL True PC9_epitope_Rep4 819.41266830591 819.41156993586 73.821 2 0.11748631009152873 0.0012924535075752137 0.006379181825897434 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 60583 16655 LHGNIITSL True PC9_epitope_Rep5 966.54983048506 966.54872993586 69.069 2 0.11748502292397152 0.0012924535075752137 0.006379369131605989 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 6171 9095 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 40.326 2 0.1174832152143787 0.0012924535075752137 0.006379632194455869 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 87705 13954 QRAAVIGDVI True PC9_epitope_Rep4 1040.5978433066398 1040.59674993586 61.577 2 0.11747857459293508 0.0012924535075752137 0.006380307558766264 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 45512 5656 IQNPTMINK True NCI_RA007_Epitope_Rep3 1057.55901526977 1057.5579099358602 29.234 2 0.11746782414022308 0.0012924535075752137 0.006381872373627563 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2', 'SP2|p.P373Qfs*22|1|0.12|ENSG00000167182|chr17:47923015-47923015|C/-|frameshift_variant'] 9729 21875 AYGNVFSAF True PC9_epitope_Rep5 974.4497820906199 974.44868993586 89.18 2 0.1174675164012567 0.0012924535075752137 0.006381917173011416 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 84871 5430 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 25.912 1 0.11746691947711443 0.0012924535075752137 0.006382004071667114 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 45346 20965 IQDEEFYTL True PC9_epitope_Rep5 1156.5288202569598 1156.5277299358602 85.702 2 0.11746355671388477 0.0012924535075752137 0.006382493635475596 ['ENSG00000178502|ENST00000319121|KLHL11'] 69567 16707 LVDEWLDSY True H1975_Epitope_Rep1 1138.51825557326 1138.51767496793 69.659 1 0.11746239374875002 0.0012924535075752137 0.006382662952855922 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 36800 19454 GVLDTLTKV True PC9_epitope_Rep2 944.55424715916 944.55314993586 80.211 2 0.11745943975408697 0.0012924535075752137 0.0063830930478729914 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 111046 18490 THDGGFLSL True PC9_epitope_Rep5 945.45559574705 945.45448993586 76.145 2 0.11745647842630402 0.0012924535075752137 0.006383524238904836 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 109107 15260 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.5744349679301 70.808 1 0.11745496726131963 0.0012924535075752137 0.006383744286534193 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 5130 19793 ALLPELREV True PC9_epitope_Rep1 1038.6073453611798 1038.6062499358602 80.955 2 0.11744946981531003 0.0012924535075752137 0.006384544857051954 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 111093 5319 THDQAVQAL True PC9_epitope_Rep6 981.4879585044899 981.48686993586 28.293 2 0.11744570369020783 0.0012924535075752137 0.006385093358837656 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 103349 8880 SPNMANTVNA True PC9_epitope_Rep1 1017.45494412405 1017.45384993586 38.996 2 0.11743849906817214 0.0012924535075752137 0.006386142774216696 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 70332 11166 LVSESSDVLPK True PC9_epitope_Rep5 1172.6288686514001 1172.6277699358602 47.936 2 0.1174383834740804 0.0012924535075752137 0.00638615961286276 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 71530 20803 MAAAWPLLL True H1975_Epitope_Rep3 984.5466596809199 984.5461149679301 86.908 1 0.11743809600528957 0.0012924535075752137 0.0063862014887650555 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 41218 16295 HVLDVIHEV True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 67.815 2 0.11742361100647448 0.0012924535075752137 0.006388311881080196 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 115776 13038 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45507496793 55.39 1 0.11741824623374603 0.0012924535075752137 0.0063890936741281545 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 44983 13385 IPAPPLSKV True PC9_epitope_Rep5 920.56950330048 920.56840993586 56.502 2 0.11741594903444352 0.0012924535075752137 0.00638942846692709 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.L27M|1|0.25|ENSG00000148346|chr9:128149604-128149604|C/A|missense_variant'] 426 13381 AALNGLYRV True PC9_epitope_Rep4 975.55016483823 975.54906993586 59.373 2 0.11741297637651285 0.0012924535075752137 0.006389861726121671 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 17334 9216 EHAQEVVL True PC9_epitope_Rep5 923.4712458111899 923.47014993586 40.395 2 0.11740916749359324 0.0012924535075752137 0.006390416905318292 ['ENSG00000080608|ENST00000397885|PUM3'] 49848 8164 KIDEHHFVAV True PC9_epitope_Rep2 1193.6193070272102 1193.61766490379 36.759 3 0.11740848201462759 0.0012924535075752137 0.006390516825075792 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 111048 16063 THDGGFLSL True PC9_epitope_Rep6 945.45559574705 945.45448993586 74.111 2 0.11740327487194534 0.0012924535075752137 0.006391275900863568 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 38856 4149 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 22.881 2 0.1173930621336732 0.0012924535075752137 0.006392764926716553 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 44497 20659 ILLKDILSV True PC9_epitope_Rep4 1012.65323292444 1012.65212993586 87.622 2 0.1173869832529417 0.0012924535075752137 0.0063936513930292205 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant', 'ATM|p.L210Wfs*20|1|0.12|ENSG00000149311|chr11:108244081-108244081|T/-|frameshift_variant', 'ATM|p.R250Sfs*3|1|0.24|ENSG00000149311|chr11:108244873-108244874|CG/-|frameshift_variant'] 6140 10668 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 46.347 2 0.11738031291962962 0.0012924535075752137 0.006394624246967552 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 118620 20894 TYSIGFLRF True PC9_epitope_Rep4 1102.5811306133398 1102.58002993586 88.527 2 0.11737558717351287 0.0012924535075752137 0.006395313574232149 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 7870 11741 ATADYICKV True PC9_epitope_Rep4 982.4793679667399 982.47826993586 52.922 2 0.11736987365341689 0.0012924535075752137 0.006396147081093047 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 68021 9526 LTDINEAY True H1975_Epitope_Rep3 937.43927697657 937.43872496793 41.648 1 0.11735204093805396 0.0012924535075752137 0.00639874925587667 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 38283 4860 HEEPSATVP True H1975_Epitope_Rep3 965.4454249861699 965.44432993586 23.82 2 0.11733891244757734 0.0012924535075752137 0.006400665642375221 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP'] 128717 13321 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 56.252 2 0.11733561947313609 0.0012924535075752137 0.006401146410721224 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 21142 19089 ERAPSLLSL True PC9_epitope_Rep1 984.5603951687599 984.55928993586 78.216 2 0.11733004396608755 0.0012924535075752137 0.006401960504894121 ['ENST00000548091.5_1_12:93965167-93966593:+|nuORF', 'ENST00000549122.5_1_12:93965649-93966593:+|nuORF', 'ENST00000547229.1_1_12:93966071-93966593:+|nuORF', 'ENST00000536696.6_1_12:93964876-93966593:+|nuORF'] 111461 11130 THTTPVLL True PC9_epitope_Rep2 880.5018176634799 880.50072993586 48.135 2 0.11732537577813447 0.0012924535075752137 0.006402642196605336 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 135082 7330 WEDEGVRAC True H1975_Epitope_Rep2 1063.4392940599098 1063.43818993586 33.135 2 0.11732351711927362 0.0012924535075752137 0.006402913634728304 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 5201 9107 ALNIETAIK True H1975_Epitope_Rep1 971.56514619603 971.56404993586 39.934 2 0.11732274201586032 0.0012924535075752137 0.006403026833967558 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 141886 15337 YVDPVNKVL True PC9_epitope_Rep5 1045.58079626017 1045.5796899358602 64.004 2 0.11732088167777506 0.0012924535075752137 0.006403298533221559 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 76819 14418 NRAPQLLIA True PC9_epitope_Rep1 994.5923640033799 994.5912699358599 60.283 2 0.11731752097457644 0.0012924535075752137 0.006403789386739285 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 104713 17950 SQVDRLVALA True PC9_epitope_Rep3 1070.6084079903399 1070.60730993586 74.25 2 0.11731434039368967 0.0012924535075752137 0.006404253965915621 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 106597 8348 STPLAGLAPK True NCI_RA007_Epitope_Rep5 953.55458151233 953.55348993586 38.783 2 0.11730081151367613 0.0012924535075752137 0.00640623046093821 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 87339 8854 QPRYPVNSV True PC9_epitope_Rep5 1058.55089311422 1058.5497899358602 39.002 2 0.11728596247929321 0.0012924535075752137 0.006408400506973376 ['ENSG00000120438|ENST00000321394|TCP1'] 87370 18628 QPSSLLPLA True PC9_epitope_Rep6 924.5280324113199 924.52748496793 84.295 1 0.11728535073104109 0.0012924535075752137 0.006408489923547963 ['ENSG00000117984|ENST00000236671|CTSD'] 29774 17689 FVPEIFHRI True PC9_epitope_Rep2 1156.6393141958 1156.63765490379 73.322 3 0.11728477143723544 0.0012924535075752137 0.006408574597517466 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 57590 4745 LEDVSKPPA True H1975_Epitope_Rep3 954.5022115863 954.50110993586 23.378 2 0.11728414357986941 0.0012924535075752137 0.006408666371134867 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 89638 21544 QYSPLLAAF True PC9_epitope_Rep4 1008.5280324113198 1008.52692993586 91.048 2 0.11728275037970282 0.0012924535075752137 0.0064088700191215105 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 85169 5568 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47634993586 26.425 2 0.11727523877295952 0.0012924535075752137 0.006409968120380156 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 91041 22217 RFLAATFLL True PC9_epitope_Rep1 1050.6226015025 1050.62150993586 90.28 2 0.11726795324664241 0.0012924535075752137 0.006411033346567937 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 43909 7148 IIALDGDTK True H1975_Epitope_Rep3 944.51786165044 944.51676993586 32.467 2 0.11725945456152227 0.0012924535075752137 0.006412276168070917 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 92155 10391 RLELTELEA True H1975_Epitope_Rep1 1072.57643915572 1072.57534993586 44.919 2 0.1172483156152048 0.0012924535075752137 0.006413905448455227 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'ENST00000418039.2_1_15:78290504-78290759:-|nuORF', 'ENST00000491479.1_1_15:78290504-78294097:-|nuORF'] 104637 17515 SQSSVVYEI True PC9_epitope_Rep5 1010.4920408254198 1010.49094993586 72.376 2 0.11724722822295947 0.0012924535075752137 0.0064140645216144085 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 124748 12281 VHAQIVSTL True PC9_epitope_Rep5 966.5498304850599 966.54872993586 52.227 2 0.11724603681194345 0.0012924535075752137 0.006414238815950645 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 106839 14671 SVASELEKI True PC9_epitope_Rep6 974.5284263341399 974.5273299358599 68.358 2 0.11723672558963084 0.0012924535075752137 0.006415601135551385 ['ENSG00000172244|ENST00000306862|C5orf34'] 34574 12862 GPSVFLFPPK True H1975_Epitope_Rep2 1087.6066170851898 1087.6055299358602 54.585 2 0.11723058180778755 0.0012924535075752137 0.006416500183015788 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 47755 15021 IYENRIYSL True PC9_epitope_Rep4 1169.6080736371698 1169.6069699358602 65.715 2 0.11722971588101451 0.0012924535075752137 0.006416626907870738 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF', 'ENST00000430836.1_1_20:3342707-3342845:-|nuORF', 'ENST00000397758.2_1_3:175436135-175436456:-|nuORF'] 1514 12380 AEEMETVIP True H1975_Epitope_Rep2 1017.4688628526899 1017.46776993586 52.706 2 0.1172278160472263 0.0012924535075752137 0.006416904949342785 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000497113.1_1_1:8022845-8031696:+|nuORF', 'ENST00000465354.5_1_1:8022845-8031070:+|nuORF', 'ENST00000460192.5_1_1:8022845-8029412:+|nuORF'] 2162 6151 AELQSRLAA True NCI_RA007_Epitope_Rep4 957.5243440132099 957.52324993586 30.271 2 0.11722483985716937 0.0012924535075752137 0.006417340539588239 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 104653 10994 SQTFVNPHV True PC9_epitope_Rep3 1027.5086939490698 1027.50758993586 47.273 2 0.1172218444231141 0.0012924535075752137 0.006417778975422209 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 3964 6912 AHDQNSNLL True PC9_epitope_Rep3 1010.47812209678 1010.47702993586 31.6 2 0.1172179579326455 0.0012924535075752137 0.006418347876911824 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'TGM2|p.E314K|1|0.17|ENSG00000198959|chr20:38142119-38142119|C/T|missense_variant'] 11753 15028 DHDGNIVEL True PC9_epitope_Rep1 1010.46688870674 1010.46578993586 62.625 2 0.11721555729336043 0.0012924535075752137 0.006418699305177256 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 4162 15090 AHTPVIISV True PC9_epitope_Rep3 935.54401682863 935.54290993586 63.18 2 0.11720567318259073 0.0012924535075752137 0.006420146432091683 ['ENSG00000182993|ENST00000330828|C12orf60'] 106723 8385 STVNVILGK True NCI_RA007_Epitope_Rep4 929.5545815123298 929.55348993586 39.066 2 0.1172021915853735 0.0012924535075752137 0.0064206562463654 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 109905 11789 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.4168749679301 50.493 1 0.11719927223934135 0.0012924535075752137 0.006421083759934521 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 38855 4077 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 22.544 2 0.1171970075532729 0.0012924535075752137 0.006421415423170116 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 48012 20298 IYLEVIHNL True PC9_epitope_Rep2 1112.6229954253201 1112.62188993586 83.498 2 0.11719690261421802 0.0012924535075752137 0.00642143079189722 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000491074.5_1_2:183605037-183619453:+|nuORF', 'ENST00000418559.5_1_2:183605037-183617329:+|nuORF'] 40426 16270 HQYDGLVEL True PC9_epitope_Rep4 1072.5189242795998 1072.5178299358602 70.537 2 0.11719364326159777 0.0012924535075752137 0.006421908154420795 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 99246 19386 SHNPLANIL True PC9_epitope_Rep3 977.52942939365 977.52832993586 79.792 2 0.11718984323225677 0.0012924535075752137 0.006422464747704294 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 40415 8757 HQVTLEESL True NCI_RA007_Epitope_Rep4 1054.5294889633 1054.52838993586 40.482 2 0.11718981058284426 0.0012924535075752137 0.006422469530092897 ['ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 78652 15279 NYVEKGFQI True PC9_epitope_Rep2 1096.5553097883198 1096.5542099358602 64.047 2 0.11718755981141443 0.0012924535075752137 0.0064227992247395446 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 104348 18024 SQISDTSVVL True PC9_epitope_Rep2 1047.5448046742702 1047.54370993586 74.634 2 0.11718540247812047 0.0012924535075752137 0.006423115247965689 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 45675 17339 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6744449037901 71.508 3 0.11718437423335189 0.0012924535075752137 0.006423265878710973 ['ENSG00000136628|ENST00000366923|EPRS1'] 3276 6233 AGFAGDDAPR True PC9_epitope_Rep3 975.4410083120698 975.43990993586 29.012 2 0.11717659007082268 0.0012924535075752137 0.006424406316245904 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 75101 11956 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 51.31 2 0.11716634269345005 0.0012924535075752137 0.006425907933602731 ['ENSG00000171223|ENST00000302754|JUNB'] 121798 17146 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 70.774 2 0.11716611242621823 0.0012924535075752137 0.0064259416801393235 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 64663 19621 LPVDVVVNA True PC9_epitope_Rep1 924.5280324113199 924.52692993586 80.299 2 0.11716228217845158 0.0012924535075752137 0.00642650304278959 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant'] 28995 12400 FTEEQAVLY True H1975_Epitope_Rep1 1098.5233409536997 1098.52277496793 52.73 1 0.11715990876003417 0.0012924535075752137 0.0064268509159040674 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 24761 9509 FASGVVKL True H1975_Epitope_Rep2 819.48543932335 819.48434993586 41.545 2 0.117159111431182 0.0012924535075752137 0.0064269677849032895 ['nc|ENSG00000100258|Q9BU23-3|LMF2', 'nc|ENSG00000100258|Q9BU23-2|LMF2', 'ENSG00000100258|ENST00000474879|LMF2'] 4055 4568 AHISGATSV True PC9_epitope_Rep3 841.4293809992101 841.42828993586 22.662 2 0.11715814524762266 0.0012924535075752137 0.006427109406664624 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 134272 12289 VYNKVHITL True PC9_epitope_Rep1 1085.62332977849 1085.62222993586 52.123 2 0.11715505625929117 0.0012924535075752137 0.006427562206403846 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 115355 13662 TRISNDLEL True PC9_epitope_Rep2 1059.5560380643099 1059.5549499358601 57.842 2 0.11713938807235902 0.0012924535075752137 0.006429859407864538 ['ENSG00000007047|ENST00000262891|MARK4'] 12752 9284 DLEIATYR True H1975_Epitope_Rep3 979.4974605590301 979.49691496793 40.705 1 0.11713685090316515 0.0012924535075752137 0.006430231471771661 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 108449 14360 SYLPTAERL True PC9_epitope_Rep2 1048.55530978832 1048.5542099358602 60.498 2 0.11713658456984695 0.0012924535075752137 0.006430270529513406 ['ENSG00000173227|ENST00000527043|SYT12'] 36144 17373 GVAPGFQVV True PC9_epitope_Rep6 872.4756029156399 872.4745099358599 79.441 2 0.11712698331867687 0.0012924535075752137 0.0064316787058312525 ['ENSG00000165724|ENST00000298585|ZMYND19'] 48062 19164 IYMDTLNIF True NCI_RA007_Epitope_Rep4 1128.5525329069999 1128.5514299358601 82.862 2 0.11712105158712534 0.0012924535075752137 0.006432548838715731 ['ENSG00000165678|ENST00000372134|GHITM'] 92878 12199 RPFQGTMGV True PC9_epitope_Rep5 991.4909357099498 991.48982993586 51.909 2 0.11711800288084791 0.0012924535075752137 0.0064329961017188485 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 7992 21009 ATDIFSYLVEY True H1975_Epitope_Rep2 1319.62853429823 1319.6274299358602 86.964 2 0.1171085827353392 0.0012924535075752137 0.006434378283350959 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'ENST00000554574.1_1_14:91942052-91948315:-|nuORF', 'nc|ENSG00000100796|Q6IN85-5|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A'] 94704 15052 RSDFFTSFY True H1975_Epitope_Rep2 1168.5189242796 1168.5178299358602 63.05 2 0.11710656423944536 0.0012924535075752137 0.006434674487081035 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENSG00000218823|ENST00000404991|PAPOLB'] 57969 5380 LEGSPSPEA True H1975_Epitope_Rep3 885.40797684829 885.4074249679301 25.761 1 0.1171060319618517 0.0012924535075752137 0.006434752598249675 ['KIAA0232|p.G888Dfs*33|1|0.26|ENSG00000170871|chr4:6863043-6863043|G/-|frameshift_variant', 'ENSG00000170871|ENST00000307659|KIAA0232'] 36306 7714 GVEGSLIVEK True H1975_Epitope_Rep3 1029.57062549929 1029.5695299358601 34.655 2 0.11710590053030315 0.0012924535075752137 0.006434771885831219 ['ENSG00000144381|ENST00000388968|HSPD1'] 37 17301 AAAAVIPTV True PC9_epitope_Rep1 811.48035394291 811.47924993586 71.364 2 0.1170875479077132 0.0013192141762042287 0.006437465686152292 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 6657 18779 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 77.246 2 0.11708024293874289 0.0013192141762042287 0.006438538215872353 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 87579 9367 QQLKKLEEL True PC9_epitope_Rep5 1127.65502382959 1127.65392993586 40.984 2 0.1170649583078036 0.0013192141762042287 0.0064407828978568825 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 45616 9390 IRAPSGTSL True PC9_epitope_Rep5 900.50288029264 900.50178993586 41.073 2 0.11706169949823472 0.0013192141762042287 0.006441261581117246 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 8421 19908 ATMPDLYHL True PC9_epitope_Rep1 1059.50591706775 1059.50480993586 81.394 2 0.11706054959524383 0.0013192141762042287 0.006441430497477395 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000373473.5_1_20:36374873-36393614:+|nuORF'] 108712 17660 SYRELFEFF True NCI_RA007_Epitope_Rep3 1236.5815245361598 1236.5804299358601 77.437 2 0.11705901737219641 0.0013192141762042287 0.006441655581895725 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 63506 22173 LLYEDALYTV True PC9_epitope_Rep1 1198.6121559581 1198.6110499358601 90.106 2 0.1170583956148656 0.0013192141762042287 0.006441746920577481 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000587504.5_1_17:73835995-73839803:-|nuORF', 'nc|ENSG00000092929|Q70J99-2|UNC13D', 'ENST00000591563.5_1_17:73836050-73840487:-|nuORF', 'ENST00000585574.5_1_17:73837076-73839803:-|nuORF', 'UNC13D|p.I195Tfs*54|1|0.21|ENSG00000092929|chr17:75840987-75840987|A/-|frameshift_variant'] 118742 15440 TYVYFTNEL True NCI_RA007_Epitope_Rep4 1148.5389910178399 1148.5378899358602 67.058 2 0.11705400495869261 0.0013192141762042287 0.006442391961723035 ['ENSG00000121858|ENST00000241261|TNFSF10', 'nc|ENSG00000121858|P50591-2|TNFSF10', 'TNFSF10|p.S111Ffs*3|1|0.21|ENSG00000121858|chr3:172509303-172509303|G/-|frameshift_variant', 'ENST00000472804.1_1_3:172229350-172241222:-|nuORF', 'ENST00000494851.5_1_3:172226989-172241222:-|nuORF', 'ENST00000466777.1_1_3:172236192-172241222:-|nuORF'] 97706 10949 SEIDQVVPAA True H1975_Epitope_Rep3 1027.5185899264297 1027.51807496793 47.203 1 0.1170500411027633 0.0013192141762042287 0.006442974354694185 ['ENSG00000162607|ENST00000339950|USP1'] 37102 13158 GVPSTAIREI True PC9_epitope_Rep1 1041.5818588893299 1041.5807699358602 55.476 2 0.11704067782564642 0.0013192141762042287 0.0064443502658360526 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3'] 62 12732 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 54.076 1 0.11703900967769566 0.0013192141762042287 0.006444595426198563 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 87968 21495 QRMDILDVL True PC9_epitope_Rep5 1101.5852300176098 1101.5841299358601 87.715 2 0.11703710976664211 0.0013192141762042287 0.0064448746588231 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 106645 6848 STSQTFIYK True NCI_RA007_Epitope_Rep4 1073.5393253710097 1073.53822993586 32.962 2 0.11702988883949807 0.0013192141762042287 0.006445936036185363 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 26935 18867 FLDPRPLTV True PC9_epitope_Rep3 1056.59678067748 1056.59568993586 77.795 2 0.11702791970006667 0.0013192141762042287 0.006446225502230261 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 27099 17799 FLGYPITL True H1975_Epitope_Rep3 922.5164050984599 922.5158549679301 74.46 1 0.117026041428161 0.0013192141762042287 0.0064465016224228 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 121819 15651 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 68.129 2 0.11701780915247885 0.0013192141762042287 0.006447711965106591 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 41127 17090 HTVGELIEV True PC9_epitope_Rep5 995.5287606873098 995.52821496793 70.758 1 0.117017467316622 0.0013192141762042287 0.0064477622279890305 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 25449 9205 FEEGLETTA True H1975_Epitope_Rep2 995.4447562798299 995.44364993586 40.36 2 0.11701392573835781 0.0013192141762042287 0.006448282997245895 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 91049 21240 RFLDDLGLKF True PC9_epitope_Rep3 1222.6710082468996 1222.66936490379 86.992 3 0.11700303800429425 0.0013192141762042287 0.006449884234019948 ['ENSG00000046604|ENST00000261590|DSG2'] 7183 11775 AQYEHDLEV True PC9_epitope_Rep1 1102.4931034545798 1102.49200993586 50.165 2 0.1170006346192273 0.0013192141762042287 0.006450237747091383 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 120129 7249 VEAFKTWKA True H1975_Epitope_Rep3 1078.5811306133398 1078.58002993586 32.855 2 0.1170002934936084 0.0013192141762042287 0.006450287924668204 ['ENSG00000156414|ENST00000409874|TDRD9', 'nc|ENSG00000156414|Q8NDG6-2|TDRD9'] 124741 16584 VHAPPMQLGF True PC9_epitope_Rep6 1095.5535359665098 1095.5524299358601 76.237 2 0.11699370014889722 0.0013192141762042287 0.006451257841635383 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 134308 10497 VYNSEYYHF True NCI_RA007_Epitope_Rep4 1220.5138388991602 1220.5132749679299 47.226 1 0.11698902131770345 0.0013192141762042287 0.006451946209339545 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 89764 5382 RAGVLAHL True NCI_RA007_Epitope_Rep3 835.50282072299 835.50172993586 28.178 2 0.11698204960630906 0.0013192141762042287 0.006452972047071786 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 75802 21036 NLNPEFISV True PC9_epitope_Rep1 1031.5287606873098 1031.52766993586 85.745 2 0.11697532018929781 0.0013192141762042287 0.0064539623834964695 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 63082 19192 LLQNNLPAV True PC9_epitope_Rep1 980.5654805492 980.56438993586 78.617 2 0.11697488614082023 0.0013192141762042287 0.006454026265433617 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 11130 5336 DDEVQVVR True NCI_RA007_Epitope_Rep5 958.4719740871799 958.47086993586 27.217 2 0.11696350572107991 0.0013192141762042287 0.006455701420706178 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'RPL26|p.R50Q|1|0.1|ENSG00000161970|chr17:8382162-8382162|C/T|missense_variant', 'ENST00000415894.1_1_1:165788676-165788994:+|nuORF', 'ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 75556 11397 NLAENISRV True PC9_epitope_Rep4 1014.54580773378 1014.5447099358599 51.609 2 0.11695787316125095 0.0013192141762042287 0.006456530669035148 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 104669 13581 SQTLVSQGL True PC9_epitope_Rep4 931.4974605590301 931.49636993586 60.134 2 0.11695695661370187 0.0013192141762042287 0.006456665616695282 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 90151 7286 REDENLQVP True H1975_Epitope_Rep2 1098.53055159246 1098.5294499358602 32.963 2 0.11694765244584912 0.0013192141762042287 0.006458035669038078 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF', 'MTMR3|p.C235Qfs*20|1|0.17|ENSG00000100330|chr22:30007143-30007152|GCTGTGGACA/-|frameshift_variant'] 142823 13568 YYSPSCREF True PC9_epitope_Rep5 1150.4753452154598 1150.4742499358601 57.213 2 0.11694562277210746 0.0013192141762042287 0.006458334579065417 ['ENSG00000100564|ENST00000216452|PIGH'] 104940 19879 SRDELLQVL True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 81.703 2 0.11693438653400359 0.0013192141762042287 0.0064599895833652304 ['ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'ENSG00000187446|ENST00000334660|CHP1'] 117293 13565 TVMDSKIVQV True PC9_epitope_Rep4 1118.60054572858 1118.59944993586 60.072 2 0.11693354032567278 0.0013192141762042287 0.006460114239519451 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 32068 12112 GESDDSILRLA True H1975_Epitope_Rep3 1174.58298108814 1174.58188993586 51.754 2 0.11693303615604624 0.0013192141762042287 0.006460188510578145 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 46876 22523 ITLEDLEQL True PC9_epitope_Rep2 1072.5652057656798 1072.5641099358602 92.126 2 0.11692689449776109 0.0013192141762042287 0.00646109332729881 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 130150 9822 VSDTVVEPY True H1975_Epitope_Rep3 1007.4811417885498 1007.48057496793 42.807 1 0.11692549949875593 0.0013192141762042287 0.006461298862016741 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 47196 10244 IVAEEFLK True H1975_Epitope_Rep1 947.5327834385898 947.53168993586 44.347 2 0.11692035622760782 0.0013192141762042287 0.006462056710223326 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'ENST00000440787.5_1_3:9845376-9847896:+|nuORF', 'nc|ENSG00000241553|P59998-4|ARPC4'] 69574 11243 LVDGDTLSY True H1975_Epitope_Rep3 981.46549172441 981.46494496793 48.349 1 0.1169200672196634 0.0013192141762042287 0.0064620992973922035 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 107817 18636 SVVAAVQGL True PC9_epitope_Rep1 842.48616759934 842.48506993586 76.471 2 0.11691972501465446 0.0013192141762042287 0.006462149723841991 ['ENSG00000110092|ENST00000227507|CCND1'] 106874 13519 SVDDGITLY True H1975_Epitope_Rep3 981.46549172441 981.46494496793 57.28 1 0.11691791108830327 0.0013192141762042287 0.006462417025758786 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 102180 16148 SLRTLTNETF True PC9_epitope_Rep1 1180.60880191316 1180.6077099358602 66.927 2 0.11691601329503035 0.0013192141762042287 0.0064626966979051915 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 96078 13429 RYLTVATVF True NCI_RA007_Epitope_Rep1 1068.59678067748 1068.59568993586 56.24 2 0.11691339191729229 0.0013192141762042287 0.006463083021915511 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 41270 6515 HVLVTLGEK True PC9_epitope_Rep6 994.58113061334 994.58002993586 33.732 2 0.11690164213079238 0.0013192141762042287 0.00646481491602359 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 126305 20790 VLIENVASL True PC9_epitope_Rep3 956.5542471591599 956.55369496793 85.24 1 0.1168952351787525 0.0013192141762042287 0.0064657594777421095 ['ENSG00000176153|ENST00000389614|GPX2'] 94886 8312 RTDDTPVVL True NCI_RA007_Epitope_Rep5 1014.5345743437399 1014.53346993586 38.649 2 0.11689116890742046 0.0013192141762042287 0.006466359028143752 ['nc|ENSG00000143622|Q92963-2|RIT1', 'ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1'] 93376 10816 RQADFVQVL True NCI_RA007_Epitope_Rep3 1074.5821932425 1074.58108993586 49.591 2 0.11687897015012971 0.0013192141762042287 0.006468157995674796 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 77202 10355 NRSNTVVIM True PC9_epitope_Rep5 1032.53861417836 1032.53750993586 44.815 2 0.11687437383504999 0.0013192141762042287 0.006468835946929331 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 98067 8466 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 37.549 1 0.1168717052896114 0.0013192141762042287 0.006469229586084465 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 140908 14074 YSEGESLFY True H1975_Epitope_Rep2 1093.46040634397 1093.4598749679299 59.289 1 0.11686702857999089 0.0013192141762042287 0.006469919507290166 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 8232 9299 ATGENLPRV True PC9_epitope_Rep1 955.5086939490699 955.50758993586 40.623 2 0.11685913475273109 0.0013192141762042287 0.006471084189091203 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 3527 14317 AGLQFPVGR True PC9_epitope_Rep2 943.5239500903898 943.52284993586 60.335 2 0.11685848295076796 0.0013192141762042287 0.006471180367263232 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 90111 6129 REAQSLISA True H1975_Epitope_Rep2 973.5192586327698 973.51816993586 28.552 2 0.11685805515308863 0.0013192141762042287 0.006471243492712445 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 129192 10044 VQSNRILGV True PC9_epitope_Rep4 984.5716285587998 984.57052993586 46.3 2 0.11683557981907715 0.0013192141762042287 0.0064745607762394936 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 74896 8201 NHHMQSISF True PC9_epitope_Rep4 1099.4869129586702 1099.48580993586 39.003 2 0.11683396643410271 0.0013192141762042287 0.0064747989700811226 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 64230 15591 LPGVDALSNI True H1975_Epitope_Rep1 997.5444107514501 997.5438649679301 65.254 1 0.11683091981876553 0.0013192141762042287 0.006475248783701785 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 17794 16954 EHSLVIDTL True PC9_epitope_Rep2 1025.53932537101 1025.5387749679298 70.458 1 0.11682880265120155 0.0013192141762042287 0.006475561388107468 ['ENSG00000143256|ENST00000368010|PFDN2'] 62619 21575 LLLDVPTAAV True PC9_epitope_Rep2 1010.6011973515799 1010.6006749679301 88.46 1 0.11682661286022919 0.0013192141762042287 0.006475884730970358 ['ENSG00000216490|ENST00000407280|IFI30'] 72022 8031 METDPQTISA True H1975_Epitope_Rep1 1091.48049016555 1091.4793899358601 35.835 2 0.11681566918224415 0.0013192141762042287 0.00647750090161994 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 8618 7377 ATYYGAFIKK True NCI_RA007_Epitope_Rep3 1160.6229954253197 1160.6213549037902 36.143 3 0.11681119980416443 0.0013192141762042287 0.006478161055650395 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'MAP4K4|p.N123Tfs*16|1|0.22|ENSG00000071054|chr2:101825376-101825376|G/-|frameshift_variant', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'TNIK|p.P670Qfs*14|1|0.22|ENSG00000154310|chr3:171125916-171125916|G/-|frameshift_variant', 'TNIK|p.K413Gfs*15|1|0.19|ENSG00000154310|chr3:171140499-171140500|CG/-|frameshift_variant', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 9296 13819 AVQIPFFAK True NCI_RA007_Epitope_Rep4 1019.5804023373499 1019.57930993586 60.397 2 0.11680678944839491 0.0013192141762042287 0.0064788125559196 ['ENSG00000188641|ENST00000370192|DPYD'] 97503 4693 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 23.146 2 0.11680540850932564 0.0013192141762042287 0.006479016562135325 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 132509 18471 VVDPLNGWMY True H1975_Epitope_Rep1 1192.5586809166 1192.55758993586 77.0 2 0.11679745490595161 0.0013192141762042287 0.006480191670170071 ['ENSG00000123384|ENST00000243077|LRP1'] 4193 10794 AHYSAVTSL True PC9_epitope_Rep5 947.47124581119 947.47014993586 46.509 2 0.11679561199387441 0.0013192141762042287 0.006480463981486282 ['ENSG00000183751|ENST00000568546|TBL3'] 23417 5926 EVSSATNALR True PC9_epitope_Rep5 1046.5356369729 1046.53452993586 27.789 2 0.11679232795918042 0.0013192141762042287 0.006480949262740816 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF'] 21794 13941 ERYFISHVL True PC9_epitope_Rep6 1162.61349337078 1162.6118549037901 65.473 3 0.116788836798928 0.0013192141762042287 0.0064814651896879525 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 85269 18037 QEQLLAILP True H1975_Epitope_Rep2 1023.5964463243098 1023.5953499358601 74.722 2 0.11678659375067703 0.0013192141762042287 0.006481796690560056 ['ENSG00000171222|ENST00000305978|SCAND1'] 73498 10415 M[Oxidation]VDPLLTKY True H1975_Epitope_Rep2 1094.56818335158 1094.5670899358602 45.075 2 0.11678138526964664 0.0013192141762042287 0.006482566517408384 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 41228 11135 HVLEEVQQV True PC9_epitope_Rep2 1079.56112344475 1079.56002993586 48.156 2 0.11677577205010375 0.0013192141762042287 0.006483396265270313 ['ENSG00000136026|ENST00000378026|CKAP4'] 107349 11122 SVLGQLGITK True NCI_RA007_Epitope_Rep3 1014.6073453611799 1014.60624993586 50.85 2 0.11677184159039225 0.0013192141762042287 0.0064839773285757085 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 39734 11269 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7077499358602 51.122 2 0.11676638329886524 0.0013192141762042287 0.006484784344436194 ['CON__P02769'] 70619 26176 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 108.33 3 0.11676269275927831 0.0013192141762042287 0.006485330051147918 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 54448 15112 KYGALVNNF True PC9_epitope_Rep1 1024.53418042092 1024.53308993586 62.946 2 0.11676056359114877 0.0013192141762042287 0.006485644903851302 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 80296 8036 PGFAPLTSR True NCI_RA007_Epitope_Rep3 944.50796567308 944.50686993586 38.7 2 0.11675841267093826 0.0013192141762042287 0.006485962988268669 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000450755.1_1_X:122696050-122696458:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 21266 16652 ERDSGSFVAF True PC9_epitope_Rep5 1113.50908787189 1113.50798993586 69.057 2 0.11675561738973828 0.0013192141762042287 0.00648637638537357 ['nc|ENSG00000120802|P42166|TMPO'] 88156 9474 QRVDSPVTV True PC9_epitope_Rep1 999.5349086969098 999.53380993586 41.299 2 0.11675490879364878 0.0013192141762042287 0.006486481184475737 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 105471 10110 SRVTNNVVL True PC9_epitope_Rep3 1000.56654317836 1000.56544993586 43.84 2 0.11675181179735035 0.0013192141762042287 0.0064869392396933 ['ENSG00000104147|ENST00000220514|OIP5'] 126473 19181 VLLGKVYVV True PC9_epitope_Rep3 988.63210355704 988.63100993586 78.998 2 0.11675100604024298 0.0013192141762042287 0.0064870584187924915 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 96847 6406 SASGPLHSV True PC9_epitope_Rep3 853.4293809992101 853.42828993586 29.666 2 0.11674157435586895 0.0013192141762042287 0.006488453612606664 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 111497 18447 THYDHVLIEL True PC9_epitope_Rep3 1238.6295373577398 1238.62844993586 76.161 2 0.116736137916198 0.0013192141762042287 0.006489257937475323 ['ENSG00000076003|ENST00000264156|MCM6'] 86539 10346 QLDENTIGY True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 44.85 2 0.11673310234671007 0.0013192141762042287 0.006489707094218291 ['nc|ENSG00000107679|Q9HB21-2|PLEKHA1', 'ENSG00000107679|ENST00000368990|PLEKHA1', 'ENST00000481451.1_1_10:124172402-124177583:+|nuORF'] 101508 20848 SLLDRFLATV True PC9_epitope_Rep6 1133.6444591458899 1133.6433699358602 92.965 2 0.11672085533217104 0.0013192141762042287 0.006491519525780228 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 54208 19542 KVVNIVPVI True PC9_epitope_Rep3 979.6430025939098 979.64190993586 80.401 2 0.11671000769669373 0.0013192141762042287 0.006493125275082354 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 21739 10692 ERTNIQVTV True PC9_epitope_Rep3 1058.57202248162 1058.57092993586 46.074 2 0.11670863985111775 0.0013192141762042287 0.006493327781403965 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.G1211W|1|0.07|ENSG00000156535|chr6:73811076-73811076|G/T|missense_variant'] 142457 20165 YYFPVKNVI True PC9_epitope_Rep1 1141.6171817688898 1141.6160899358601 82.394 2 0.11670597513213161 0.0013192141762042287 0.0064937223044348675 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 20741 8643 EQEVNILK True PC9_epitope_Rep4 971.5287606873098 971.52766993586 40.736 2 0.11669992291133414 0.0013192141762042287 0.006494618448242255 ['ENSG00000100345|ENST00000216181|MYH9'] 37804 12858 GYFGNPQKF True PC9_epitope_Rep4 1056.50288029264 1056.5017899358602 57.326 2 0.11669859911838314 0.0013192141762042287 0.0064948144764399255 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 34719 5614 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 26.981 2 0.11669435233044186 0.0013192141762042287 0.0064954433826715004 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 32567 7377 GGGQIIPTAR True PC9_epitope_Rep2 968.5403284305199 968.53922993586 33.757 2 0.11669068580359752 0.0013192141762042287 0.006495986405788647 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 103682 6765 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 30.827 2 0.11668979314447439 0.0013192141762042287 0.006496118617846081 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 47835 20463 IYGYVAEQF True PC9_epitope_Rep5 1088.5178616504397 1088.51676993586 83.747 2 0.11668615996611671 0.0013192141762042287 0.006496656756192557 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 26202 21171 FHDHALMIIF True PC9_epitope_Rep5 1242.6219498795 1242.6208499358602 86.484 2 0.11668384390605775 0.0013192141762042287 0.006496999828530442 ['ENSG00000198712|ENST00000361739|MT-CO2'] 28151 16890 FRDGLKLML True PC9_epitope_Rep4 1091.61613622307 1091.61502993586 72.951 2 0.11667321516362901 0.0013192141762042287 0.006498574464385883 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 134399 17146 VYPGDPLRF True PC9_epitope_Rep6 1062.5498304850598 1062.5487299358601 78.538 2 0.11666982853311489 0.0013192141762042287 0.006499076267780664 ['ENSG00000170892|ENST00000396388|TSEN34'] 111305 11125 THMPSVVGV True PC9_epitope_Rep6 925.4691376362099 925.46804993586 53.731 2 0.11666531124712268 0.0013192141762042287 0.006499745661210046 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 15214 11425 EADVAQLEY True H1975_Epitope_Rep2 1036.47130538084 1036.4707749679299 48.998 1 0.11666295944874253 0.0013192141762042287 0.006500094188700599 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 3927 10206 AHDDSVM[Oxidation]YL True PC9_epitope_Rep4 1065.44371111445 1065.4426099358602 46.934 2 0.11665979917922957 0.0013192141762042287 0.006500562557148009 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 127291 16977 VMAPRTVLL True PC9_epitope_Rep5 998.5946725024999 998.59356993586 70.32 2 0.11665295730240381 0.0013192141762042287 0.006501576671546234 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 68075 12985 LTDLVPNTEY True H1975_Epitope_Rep2 1163.57101942211 1163.56992993586 55.064 2 0.11665146615383953 0.0013192141762042287 0.006501797712506441 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 735 13765 AAVLEQTQL True PC9_epitope_Rep6 971.5287606873098 971.52766993586 64.746 2 0.1166487674093558 0.0013192141762042287 0.006502197780490055 ['ENST00000517198.2_22:34100813-34100885:-|nuORF'] 9141 19273 AVLDDKLYVV True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 79.507 2 0.11664762734502968 0.0013192141762042287 0.006502366793400458 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 90823 9348 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 40.918 2 0.11664704659508532 0.0013192141762042287 0.006502452890394967 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 99057 6490 SHGDVIRPL True PC9_epitope_Rep4 992.5403284305199 992.53922993586 32.082 2 0.11664635834248273 0.0013192141762042287 0.00650255492624586 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 4058 4669 AHISGATSV True PC9_epitope_Rep5 841.4293809992101 841.42828993586 23.013 2 0.11664555147167743 0.0013192141762042287 0.006502674549643402 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 97076 12711 [Acetylation]-SDFDEFER True H1975_Epitope_Rep1 1085.43016916115 1085.42957496793 53.951 1 0.11663901677134786 0.0013192141762042287 0.006503643436751853 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.Q10H|1|0.07|ENSG00000063244|chr19:55655134-55655134|G/T|missense_variant', 'U2AF2|p.L11F|1|0.08|ENSG00000063244|chr19:55655135-55655135|C/T|missense_variant'] 45141 18000 IPNPAQTSVVV True PC9_epitope_Rep1 1123.62372370131 1123.62262993586 74.031 2 0.11663598977594822 0.0013192141762042287 0.006504092290986502 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 77855 14574 NVELDPEIQ True PC9_epitope_Rep6 1055.51350454599 1055.51297496793 67.956 1 0.11663584973996871 0.0013192141762042287 0.0065041130567764635 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 1171 5101 AEAPQLRPA True H1975_Epitope_Rep3 951.5137793295099 951.51268993586 24.732 2 0.11663210374274434 0.0013192141762042287 0.0065046685707609315 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 9224 14462 AVNPKFLAV True PC9_epitope_Rep4 957.5647522732099 957.56364993586 63.539 2 0.11661953383410877 0.0013192141762042287 0.00650653296722556 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 2187 8303 AELWKNPTA True H1975_Epitope_Rep1 1028.52909504048 1028.5279899358602 36.869 2 0.11661528881465184 0.0013192141762042287 0.006507162715288328 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|446|11.79|0.62|4.24|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C'] 84955 16212 QEELDTLFTTA True H1975_Epitope_Rep3 1266.5979624459399 1266.59686993586 67.815 2 0.11661154720073413 0.0013192141762042287 0.006507717832384733 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 17605 11262 EHINEGETAML True PC9_epitope_Rep4 1242.55505208814 1242.5539499358601 51.094 2 0.11660364335818173 0.0013192141762042287 0.00650889062173249 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 76411 18268 NQDKNFAFL True PC9_epitope_Rep1 1095.53490869691 1095.53380993586 75.058 2 0.11659026800066627 0.0013192141762042287 0.006510875754887228 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 84393 14511 QAALEFHGV True PC9_epitope_Rep3 970.4872302284999 970.48612993586 60.938 2 0.11658521243271208 0.0013192141762042287 0.0065116262415561245 ['ENSG00000187231|ENST00000428443|SESTD1'] 43141 16874 IFDLGGGTFD True H1975_Epitope_Rep3 1040.48147614172 1040.48097496793 70.458 1 0.11658275530231313 0.0013192141762042287 0.006511991026937046 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 21241 14397 ERDPSPWAV True PC9_epitope_Rep5 1055.50360856863 1055.5025099358602 60.378 2 0.11656729740774167 0.0013192141762042287 0.006514286360799903 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 71828 5949 [Acetylation]-M[Oxidation]EKTELIQK True NCI_RA007_Epitope_Rep2 1176.6060257285797 1176.6049299358601 27.75 2 0.11656354366361191 0.0013192141762042287 0.006514843870890765 ['ENSG00000134308|ENST00000238081|YWHAQ'] 103209 6412 SPKAALRYAA True PC9_epitope_Rep3 1046.58727862294 1046.5861899358601 29.689 2 0.11655942185581107 0.0013192141762042287 0.006515456099669792 ['ENSG00000181789|ENST00000314797|COPG1'] 106158 4520 STDPAAPNLK True NCI_RA007_Epitope_Rep5 1012.5189242796 1012.51782993586 24.04 2 0.11655904064322521 0.0013192141762042287 0.006515512725544748 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 115585 8612 TRSTFSTNY True PC9_epitope_Rep5 1075.49343780775 1075.4923499358601 38.07 2 0.11655842177040848 0.0013192141762042287 0.0065156046548376775 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 91688 4273 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 23.013 2 0.11655361007135517 0.0013192141762042287 0.006516319442633347 ['ENSG00000100292|ENST00000216117|HMOX1'] 62129 4183 LLEGEESR True NCI_RA007_Epitope_Rep4 931.4610750503099 931.45996993586 22.395 2 0.11655056656328562 0.0013192141762042287 0.006516771601413284 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 103394 6272 SPPPPPPPP True H1975_Epitope_Rep2 881.4647038787699 881.46360993586 29.07 2 0.11655030764256706 0.0013192141762042287 0.006516810069379156 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 5910 16710 APGNPVLAV True PC9_epitope_Rep1 836.4756029156399 836.4745099358599 69.103 2 0.11655014877108687 0.0013192141762042287 0.006516833673094742 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 3970 14025 AHDTTLVAL True PC9_epitope_Rep1 939.50254593947 939.50144993586 58.786 2 0.1165492642064554 0.0013192141762042287 0.0065169650953839295 ['ENSG00000134575|ENST00000672073|ACP2'] 1853 12090 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 51.517 1 0.11654557717017446 0.0013192141762042287 0.006517512916653226 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 103841 7723 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 35.082 2 0.1165273763750961 0.0013192141762042287 0.0065202178543954815 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 105074 14442 SRDQTVLGL True PC9_epitope_Rep3 987.5349086969098 987.53380993586 60.657 2 0.11652534981699941 0.0013192141762042287 0.006520519101861037 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1'] 96172 7577 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.5550749037902 36.934 3 0.11652455842389615 0.0013192141762042287 0.006520636745968202 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 96339 12495 RYSSMAASF True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 53.06 2 0.11652433903898518 0.0013192141762042287 0.0065206693588772775 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 92801 18522 RPALPVSYLQA True PC9_epitope_Rep1 1213.68190728377 1213.68080993586 76.034 2 0.1165222058333914 0.0013192141762042287 0.006520986481212925 ['ENSG00000167615|ENST00000326764|LENG8'] 134760 20167 VYTSVVEEL True PC9_epitope_Rep5 1037.5280919809697 1037.52698993586 82.622 2 0.11649874371873907 0.0013192141762042287 0.0065244753493961674 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 48967 5533 KEERPPELP True H1975_Epitope_Rep3 1093.5767735088898 1093.57566993586 26.331 2 0.11648675340957516 0.0013192141762042287 0.006526259035989052 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 77183 7471 NRSDPVTL True PC9_epitope_Rep2 900.46649478392 900.46538993586 34.109 2 0.11648221022785296 0.0013192141762042287 0.006526935006745887 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 15088 20510 DYTIGFGKF True PC9_epitope_Rep2 1046.50729696674 1046.5061899358602 84.322 2 0.11648176909122546 0.0013192141762042287 0.006527000646194675 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 9768 23508 AYILDTLVF True PC9_epitope_Rep2 1053.57464825057 1053.57354993586 95.898 2 0.11647966805588976 0.0013192141762042287 0.006527313281058776 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 103952 17749 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51289496793 73.291 1 0.11646674861948483 0.0013192141762042287 0.006529236018424688 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 99399 19288 SHVDLVVMV True PC9_epitope_Rep5 997.52665251233 997.52554993586 79.235 2 0.11646216982936856 0.0013192141762042287 0.0065299175899084004 ['ENSG00000031698|ENST00000234677|SARS1'] 30066 15853 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6166049037902 73.249 3 0.11645606886768406 0.0013192141762042287 0.006530825850372313 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 95277 11578 RVPKTLVLV True PC9_epitope_Rep4 1023.6804507317898 1023.6793499358599 52.295 2 0.11645438800063881 0.0013192141762042287 0.006531076105482471 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 24204 17461 EYRPEFSNF True PC9_epitope_Rep3 1187.5247379360299 1187.52364993586 72.341 2 0.11645016713368346 0.0013192141762042287 0.0065317045684322545 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 17862 15143 EHVPGADIL True PC9_epitope_Rep1 949.4868958753299 949.48578993586 63.07 2 0.11644920151450618 0.0013192141762042287 0.006531848351874975 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 25666 7375 FEQEMATAA True NCI_RA007_Epitope_Rep3 996.4222470134398 996.4216949679301 36.136 1 0.1164440043355798 0.0013192141762042287 0.006532622279495295 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 75588 5716 NLDKNTVGY True H1975_Epitope_Rep2 1022.5032742154599 1022.50216993586 26.985 2 0.11644387918825883 0.0013192141762042287 0.006532640916661059 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11'] 72230 12148 MHFESGSTL True PC9_epitope_Rep3 1007.43823143075 1007.43712993586 51.768 2 0.11643992860304182 0.0013192141762042287 0.006533229271560982 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 60604 5650 LHHDDPEVL True PC9_epitope_Rep6 1073.51417325233 1073.5130699358601 29.832 2 0.1164388228936337 0.0013192141762042287 0.006533393952485775 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 88017 13782 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 57.859 2 0.11643484189297428 0.0013192141762042287 0.006533986903806064 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 85798 5972 QHDPSAVAV True PC9_epitope_Rep5 922.4508447197799 922.4502949679301 27.966 1 0.11643223403302728 0.0013192141762042287 0.006534375360659463 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 53268 19788 KQIDQFLVV True PC9_epitope_Rep1 1088.62299542532 1088.62188993586 80.937 2 0.11642658722842458 0.0013192141762042287 0.006535216564098215 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'nc|ENSG00000182979|Q13330-2|MTA1'] 23755 18724 EYGKFFVTL True PC9_epitope_Rep6 1102.5698972233 1102.5688099358601 84.664 2 0.11642431968018048 0.0013192141762042287 0.006535554389989422 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 73097 20928 M[Oxidation]RFLAATFL True PC9_epitope_Rep1 1084.57393743836 1084.57282993586 85.32 2 0.11641746337707834 0.0013192141762042287 0.0065365759651983876 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 5997 11292 APILVPHTA True PC9_epitope_Rep1 917.5334521449299 917.53234993586 48.314 2 0.11641601760920588 0.0013192141762042287 0.006536791401501957 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52'] 3097 11540 AGAEGFVRV True PC9_epitope_Rep2 904.4766655447999 904.47556993586 49.714 2 0.1164145435488239 0.0013192141762042287 0.0065370110608321515 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 31631 13324 GEFGGFGSV True NCI_RA007_Epitope_Rep4 855.3762827971899 855.37573496793 58.4 1 0.11640510254140651 0.0013192141762042287 0.006538418097084916 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 35887 4630 GTNPGIITK True NCI_RA007_Epitope_Rep1 899.50763131991 899.50652993586 22.098 2 0.11640463209179853 0.0013192141762042287 0.006538488218034972 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 34716 6643 GQEDHYNNL True PC9_epitope_Rep1 1088.45230127176 1088.45120993586 30.356 2 0.11640197285460284 0.0013192141762042287 0.006538884593559558 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 87697 14154 QQYNSFVSL True NCI_RA007_Epitope_Rep5 1084.5189242796 1084.5178299358602 61.132 2 0.11638346839104237 0.0013192141762042287 0.006541643444122031 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 105062 12903 SRDPVQLNL True PC9_epitope_Rep6 1040.56145779792 1040.56036993586 61.164 2 0.11638318793104713 0.0013192141762042287 0.006541685266917793 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 97513 4919 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39725496793 24.049 1 0.11637983246947363 0.0013192141762042287 0.0065421856607156895 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 96304 8875 RYSEYAEEF True NCI_RA007_Epitope_Rep3 1192.5036681382796 1192.50256993586 42.001 2 0.1163775779599345 0.0013192141762042287 0.006542521892481793 ['ENSG00000139505|ENST00000381801|MTMR6'] 76581 9532 NQLIRTSGV True PC9_epitope_Rep5 986.55089311422 986.54978993586 41.623 2 0.11637522002894629 0.0013192141762042287 0.006542873566243422 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 41558 20787 HYSPIYLSF True PC9_epitope_Rep5 1125.5494961318898 1125.54838993586 85.009 2 0.11637340545267 0.0013192141762042287 0.006543144213855044 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 101854 11535 SLPKGVVEV True PC9_epitope_Rep4 926.54368247546 926.54258993586 52.132 2 0.11634927701404821 0.0013192141762042287 0.0065467440532588515 ['ENSG00000149257|ENST00000358171|SERPINH1'] 75528 19189 NKTDVVLIL True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 78.85 2 0.11634764352057188 0.0013192141762042287 0.006546987831738712 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3', 'DAPK3|p.E84K|1|0.14|ENSG00000167657|chr19:3964804-3964804|C/T|missense_variant'] 69628 13028 LVDPSVYGY True H1975_Epitope_Rep3 1011.49131254943 1011.49020993586 55.349 2 0.1163443493749073 0.0013192141762042287 0.006547479468658045 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 124997 9577 VHYPGEAVAT True PC9_epitope_Rep5 1042.5083595959 1042.5072699358602 41.798 2 0.11634361616907582 0.0013192141762042287 0.006547588901327453 ['ENSG00000131459|ENST00000253778|GFPT2'] 28481 11825 FSDVDSPYY True H1975_Epitope_Rep2 1091.44475627983 1091.44364993586 50.561 2 0.11634090193021253 0.0013192141762042287 0.006547994023253148 ['ENSG00000170779|ENST00000336219|CDCA4'] 107666 4883 SVQRYVINH True NCI_RA007_Epitope_Rep4 1114.5883412521 1114.5872499358602 25.233 2 0.11633986625708134 0.0013192141762042287 0.006548148612204283 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR'] 106459 6150 STITGVMDK True NCI_RA007_Epitope_Rep5 950.4742825863 950.47318993586 30.335 2 0.11633775308611885 0.0013192141762042287 0.006548464044051043 ['ENSG00000147872|ENST00000276914|PLIN2'] 140001 20026 YQDPVTLQL True PC9_epitope_Rep4 1075.55497543515 1075.55447496793 85.166 1 0.11633638366672307 0.0013192141762042287 0.006548668464411195 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 107924 11053 SVVTGGVQSV True PC9_epitope_Rep4 931.49746055903 931.49636993586 50.291 2 0.11633202652500149 0.0013192141762042287 0.006549318918931819 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 2679 7410 AESPGVPVA True NCI_RA007_Epitope_Rep5 825.4232329896099 825.4226849679301 35.18 1 0.11633148861272236 0.0013192141762042287 0.0065493992253543975 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 134907 10727 VYVVGTAHF True NCI_RA007_Epitope_Rep2 991.5127167003499 991.51160993586 46.326 2 0.11633089127259648 0.0013192141762042287 0.006549488405048303 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 115705 7952 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.384 2 0.1163304664490662 0.0013192141762042287 0.006549551829653711 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 111149 20826 THFNFAIVF True PC9_epitope_Rep4 1094.5549158654999 1094.55380993586 88.258 2 0.11632762295292633 0.0013192141762042287 0.00654997636865269 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 131051 10820 VTDSGPTFNY True H1975_Epitope_Rep3 1099.4822044177101 1099.4816749679298 46.698 1 0.11632667976591182 0.0013192141762042287 0.006550117194053364 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 45623 11094 IRDEGISAL True PC9_epitope_Rep4 972.52400966004 972.52290993586 50.45 2 0.11632429224445774 0.0013192141762042287 0.0065504736833573735 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 41431 19084 HYILHNSFF True PC9_epitope_Rep1 1176.5716285587998 1176.5705299358601 78.197 2 0.11632092989542535 0.0013192141762042287 0.006550975759635466 ['ENSG00000163659|ENST00000295924|TIPARP'] 6935 10901 AQIKEM[Oxidation]VEL True PC9_epitope_Rep2 1075.55834694387 1075.55724993586 47.25 2 0.1163208803706643 0.0013192141762042287 0.00655098315510456 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 9037 12117 AVHEDIVAV True PC9_epitope_Rep3 951.5025459394699 951.50144993586 51.651 2 0.11632039751033164 0.0013192141762042287 0.006551055260444802 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 90318 9616 REFDGIGAV True NCI_RA007_Epitope_Rep5 962.4821448480598 962.48104993586 43.631 2 0.11631085551194983 0.0013192141762042287 0.006552480321635734 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC'] 76949 15026 NRDTQELLL True PC9_epitope_Rep1 1100.58258716532 1100.5814899358602 62.617 2 0.11630781490124042 0.0013192141762042287 0.006552934488643748 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 47885 14823 IYIGGQEHF True PC9_epitope_Rep3 1062.5134449763398 1062.5123499358601 62.153 2 0.11630736805908631 0.0013192141762042287 0.006553001234712486 ['ENSG00000158125|ENST00000379416|XDH'] 117964 11632 TYAPAIHQI True PC9_epitope_Rep2 1012.5341804209202 1012.53308993586 50.07 2 0.11630672641261462 0.0013192141762042287 0.006553097080406464 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 5005 12395 ALIARVTNV True PC9_epitope_Rep2 955.58146496651 955.58036993586 52.987 2 0.11630008108807893 0.0013192141762042287 0.00655408980339616 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 106783 8638 SVADTVARV True PC9_epitope_Rep6 916.4977949121999 916.49668993586 43.045 2 0.11629943378520673 0.0013192141762042287 0.006554186509643945 ['ENSG00000145632|ENST00000274289|PLK2'] 87700 18286 QQYNSFVSL True PC9_epitope_Rep6 1084.5189242796 1084.5178299358602 82.98 2 0.11629844889159291 0.0013192141762042287 0.006554333654193393 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 38998 9024 HHMGGMAGL True PC9_epitope_Rep5 909.3949271501299 909.39382993586 39.657 2 0.1162946022521098 0.0013192141762042287 0.006554908378556444 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 8989 8479 AVGLVLPAK True NCI_RA007_Epitope_Rep3 866.5589386167799 866.55784993586 40.429 2 0.11629425045857993 0.0013192141762042287 0.0065549609422876865 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 61058 18398 LIGEFLEKV True PC9_epitope_Rep6 1046.60119735158 1046.60010993586 83.414 2 0.11628835247647897 0.0013192141762042287 0.006555842258749084 ['RNMT|p.S181C|1|0.16|ENSG00000101654|chr18:13734587-13734587|A/T|missense_variant', 'RNMT|p.L412Efs*31|1|0.14|ENSG00000101654|chr18:13746313-13746319|CTTAAAA/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 34856 23366 GQLDFSEFL True PC9_epitope_Rep1 1054.49712620586 1054.4960299358602 94.658 2 0.11628750126274427 0.0013192141762042287 0.0065559694623928124 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 54733 19617 KYMDVQFDF True PC9_epitope_Rep4 1191.52704643515 1191.5259499358601 83.573 2 0.11628655809921114 0.0013192141762042287 0.006556110409630836 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 76474 8415 NQGPHSPIL True PC9_epitope_Rep2 961.4981292653699 961.49702993586 37.74 2 0.1162804084898612 0.0013192141762042287 0.006557029485259112 ['ENSG00000100147|ENST00000255784|CCDC134'] 53102 12148 KPSELLTSV True PC9_epitope_Rep2 972.54916177872 972.54806993586 52.037 2 0.1162801215735799 0.0013192141762042287 0.006557072368727768 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 138536 18314 YHVPVVVVP True PC9_epitope_Rep2 1007.5804023373499 1007.57930993586 75.771 2 0.11627276723571299 0.00132054489852655 0.006558171665831612 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 118431 18190 TYPENWRAF True PC9_epitope_Rep1 1182.5458077337798 1182.54470993586 74.757 2 0.11626662224700947 0.00132054489852655 0.006559090331724757 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 43706 7755 IHDSQAPSL True PC9_epitope_Rep5 966.47705946762 966.47596993586 34.771 2 0.11626570789779316 0.00132054489852655 0.006559227036155457 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 4462 12846 AIVDKVPSV True PC9_epitope_Rep2 926.54368247546 926.54258993586 54.712 2 0.11626466277522908 0.00132054489852655 0.006559383295915286 ['ENSG00000181789|ENST00000314797|COPG1'] 115132 11553 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 49.434 2 0.11626426583361399 0.00132054489852655 0.006559442644928724 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 110194 6901 TEQEVAQVASA True H1975_Epitope_Rep1 1131.54078192299 1131.53968993586 31.584 2 0.11626278634475916 0.00132054489852655 0.006559663856379635 ['ENSG00000196878|ENST00000356082|LAMB3'] 45517 19822 IQPDNIVYV True PC9_epitope_Rep2 1059.56006081559 1059.5589699358602 81.635 2 0.11624509563368828 0.00132054489852655 0.006562309513141022 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 108297 24272 SYIPLFPQLYF True PC9_epitope_Rep2 1386.72237511342 1386.7212699358602 98.903 2 0.11624453730095129 0.00132054489852655 0.006562393029040881 ['ENSG00000165996|ENST00000361271|HACD1'] 24767 9676 FASHVSPEV True PC9_epitope_Rep5 971.47124581119 971.47014993586 42.187 2 0.11624173313503772 0.00132054489852655 0.006562812494270944 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 73005 15799 MRAFADAL True PC9_epitope_Rep3 893.4429228883698 893.44182993586 65.925 2 0.1162413339256671 0.00132054489852655 0.006562872212705092 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 7603 18577 ASFNDTFVHV True PC9_epitope_Rep3 1135.5298233164701 1135.5287299358602 76.683 2 0.11623128540532869 0.00132054489852655 0.006564375562712178 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 40124 19109 HPYLFPVAA True PC9_epitope_Rep5 1013.5334521449298 1013.53234993586 78.535 2 0.11622433460811502 0.00132054489852655 0.0065654156611673455 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 105308 9189 SRNSNTVVF True PC9_epitope_Rep5 1022.5145076055 1022.5134099358601 40.29 2 0.11622265692770624 0.00132054489852655 0.006565666728730929 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4'] 105493 19237 SRYPDQWIV True PC9_epitope_Rep3 1162.57710786206 1162.5760099358602 79.215 2 0.1162123929976266 0.00132054489852655 0.006567202945686045 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 39433 5177 HKVPGDVSL True NCI_RA007_Epitope_Rep3 950.5185303567799 950.51742993586 27.355 2 0.116211165757685 0.00132054489852655 0.006567386651826853 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 31668 10252 GEFSITYKP True H1975_Epitope_Rep2 1040.5178616504397 1040.51727496793 44.441 1 0.116210429074986 0.00132054489852655 0.006567496928617457 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 134815 19648 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep6 1230.58422733854 1230.5831299358601 88.234 2 0.11620537833185114 0.00132054489852655 0.006568253041771381 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 137646 12244 YEIDKTLGI True H1975_Epitope_Rep1 1050.55972646242 1050.5586299358602 52.118 2 0.11619933587551377 0.00132054489852655 0.006569157728958536 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 96437 18269 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41211496793 75.284 1 0.11618914670443883 0.00132054489852655 0.006570683544093069 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 48240 11832 IYQKAFEHL True PC9_epitope_Rep1 1147.6025943339098 1147.60093490379 50.377 3 0.11618742348244432 0.00132054489852655 0.006570941628426739 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 111230 6364 THITAQTAV True PC9_epitope_Rep5 940.4977949122 940.49668993586 29.457 2 0.11618490488163223 0.00132054489852655 0.006571318853171995 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 27346 17202 FLSQPILL True H1975_Epitope_Rep1 929.5586042636099 929.55805496793 71.623 1 0.11617787355727159 0.00132054489852655 0.006572372084925004 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 54327 14342 KYDPNVYSI True PC9_epitope_Rep1 1097.53932537101 1097.53822993586 59.99 2 0.11617239701184888 0.00132054489852655 0.006573192537950045 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 54138 17787 KVPEWVDTV True PC9_epitope_Rep3 1071.5600608155898 1071.5589699358602 73.619 2 0.1161676899727366 0.00132054489852655 0.006573897789191087 ['ENSG00000105372|ENST00000598742|RPS19'] 9485 20843 AVVPGLLEV True PC9_epitope_Rep4 895.5378688190299 895.53676993586 88.325 2 0.11616627554337905 0.00132054489852655 0.0065741097261915096 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 104370 21002 SQITSLVTL True PC9_epitope_Rep2 960.54916177872 960.54806993586 86.237 2 0.11616201594924241 0.00132054489852655 0.006574748020625988 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 29785 18262 FVPIKVEQI True PC9_epitope_Rep1 1071.63283183303 1071.6317299358602 75.035 2 0.1161613196000583 0.00132054489852655 0.006574852373344274 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 78319 14513 NYIRITSEI True PC9_epitope_Rep6 1107.59242357303 1107.5913299358601 67.708 2 0.11616022476457306 0.00132054489852655 0.006575016445235221 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 1222 5831 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54561490379 27.42 3 0.11615766888323868 0.00132054489852655 0.006575399484750875 ['ENSG00000154124|ENST00000284274|OTULIN'] 117521 6870 TVRSSTSSI True PC9_epitope_Rep3 936.48762415132 936.48652993586 31.44 2 0.11615727857105791 0.00132054489852655 0.006575457981156502 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 73075 14181 MRDSLSQVL True PC9_epitope_Rep4 1047.53827982519 1047.5371899358602 62.45 2 0.1161429544643929 0.00132054489852655 0.006577605096918673 ['nc|ENSG00000188428|Q8TDH9-2|BLOC1S5', 'nc|ENSG00000188428|Q8TDH9-3|BLOC1S5', 'ENSG00000188428|ENST00000397457|BLOC1S5'] 3421 12747 [Acetylation]-AGITTIEAVK True NCI_RA007_Epitope_Rep2 1043.58627587973 1043.5851699358602 54.201 2 0.11614178955606014 0.00132054489852655 0.006577779741143058 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 103836 7256 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 33.297 2 0.11613548318327152 0.00132054489852655 0.006578725277172354 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 77008 13357 NRHEIAVML True PC9_epitope_Rep5 1081.57024865981 1081.5691499358602 56.392 2 0.11613218241369772 0.00132054489852655 0.006579220225541385 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10'] 140140 10816 YQRADFVL True NCI_RA007_Epitope_Rep5 1010.5185303567798 1010.51742993586 48.238 2 0.11613112677818221 0.00132054489852655 0.006579378525081918 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 108278 18391 SYIELPAYL True NCI_RA007_Epitope_Rep5 1067.55391280599 1067.55280993586 77.55 2 0.11611612891140209 0.00132054489852655 0.006581627954827163 ['ENSG00000162511|ENST00000294507|LAPTM5'] 109644 2772 TEAPLNPKA True H1975_Epitope_Rep2 939.5025459394699 939.50144993586 14.692 2 0.11611205984715911 0.00132054489852655 0.006582238375552893 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 127832 10037 VPEWVDTVK True NCI_RA007_Epitope_Rep5 1071.5600608155898 1071.5589699358602 45.246 2 0.11610921692159548 0.00132054489852655 0.0065826648897436 ['ENSG00000105372|ENST00000598742|RPS19'] 104070 8710 SQDPYHETL True PC9_epitope_Rep2 1088.4774533904401 1088.47634993586 38.865 2 0.11610633285255671 0.00132054489852655 0.006583097604013034 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 76857 19695 NRDEMLVVL True PC9_epitope_Rep3 1087.5695799534699 1087.56848993586 80.987 2 0.11610539661908786 0.00132054489852655 0.006583238078714145 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 110187 8165 TEQDVLTVKP True H1975_Epitope_Rep2 1128.60265390356 1128.60154993586 36.357 2 0.11609654983726972 0.00132054489852655 0.006584565614887468 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 73311 8430 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46397496793 37.378 1 0.11608238218671307 0.00132054489852655 0.006586692135842948 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 25599 15338 FELPQTPLA True H1975_Epitope_Rep3 1014.5385970950199 1014.53807496793 64.408 1 0.11608013900257172 0.00132054489852655 0.006587028892157939 ['ENSG00000113369|ENST00000265138|ARRDC3'] 130960 8923 VTDLAGNEY True H1975_Epitope_Rep2 980.4450906330001 980.44398993586 39.284 2 0.1160801289262673 0.00132054489852655 0.006587030404893264 ['ENSG00000197081|ENST00000356956|IGF2R'] 21654 18042 ERSDTFINL True PC9_epitope_Rep1 1093.54038800017 1093.53928993586 74.191 2 0.11607438516148758 0.00132054489852655 0.0065878927597448666 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 100971 19345 SLFPGKLEVV True PC9_epitope_Rep4 1087.62774645259 1087.62664993586 82.52 2 0.11607418726020158 0.00132054489852655 0.006587922474118561 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 134724 12914 VYTSGIYNI True NCI_RA007_Epitope_Rep4 1028.51786165044 1028.51676993586 56.763 2 0.11606520466081251 0.00132054489852655 0.006589271325763637 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 142519 12499 YYINGKTGL True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 53.075 2 0.1160587101955619 0.00132054489852655 0.006590246719693966 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 31455 5023 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 24.401 2 0.11605810334547724 0.00132054489852655 0.006590337868765431 ['ENSG00000131116|ENST00000300811|ZNF428'] 1085 9815 AEAIRILAA True H1975_Epitope_Rep1 926.5549158654999 926.55380993586 42.682 2 0.11605767845328106 0.00132054489852655 0.00659040168843522 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 25581 14840 FELDKVFSP True H1975_Epitope_Rep2 1080.54916177872 1080.5480699358602 62.24 2 0.11605570529145881 0.00132054489852655 0.006590698069220668 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3', 'nc|ENSG00000140859|Q9BVG8-5|KIFC3'] 130069 10493 VSDFGGRSL True PC9_epitope_Rep1 936.46649478392 936.46538993586 45.251 2 0.11605275212153554 0.00132054489852655 0.006591141677342969 ['ENSG00000132383|ENST00000254719|RPA1'] 8687 8567 AVALPLQTK True NCI_RA007_Epitope_Rep1 939.57531695691 939.57420993586 37.325 2 0.11604681374625231 0.00132054489852655 0.00659203379367526 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 129227 19182 VQTPVMTVV True PC9_epitope_Rep5 972.5314035396 972.53030993586 78.82 2 0.11602874288528346 0.00132054489852655 0.006594749283994119 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 21134 5533 ERAPGETAL True PC9_epitope_Rep4 942.4770594676199 942.47596993586 28.047 2 0.11602305801179982 0.00132054489852655 0.006595603769213692 ['ENSG00000092148|ENST00000399332|HECTD1'] 108427 22787 SYLPFTEAF True PC9_epitope_Rep3 1073.5069626135698 1073.50637496793 92.921 1 0.11601040514411297 0.00132054489852655 0.006597505990244633 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 76040 14598 NMDNMFESY True H1975_Epitope_Rep2 1149.41069635357 1149.4101749679298 61.309 1 0.11600649220612066 0.00132054489852655 0.006598094365917173 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 36795 14243 GVLDAILATK True NCI_RA007_Epitope_Rep3 999.59644632431 999.59534993586 63.337 2 0.11599502749327578 0.00132054489852655 0.006599818571058471 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 104024 17705 SQDLVYETV True PC9_epitope_Rep3 1052.50260550912 1052.5015099358602 73.298 2 0.11598836172805133 0.00132054489852655 0.0066008212526140675 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 35341 6758 GRSEAVVEY True PC9_epitope_Rep4 1008.48762415132 1008.48652993586 33.192 2 0.11598747843986526 0.00132054489852655 0.006600954130211331 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 21173 16318 ERDGFQDVL True PC9_epitope_Rep1 1077.50908787189 1077.50798993586 67.585 2 0.11598358184660014 0.00132054489852655 0.006601540345883401 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6'] 35650 9321 GTDNGDLPSY True H1975_Epitope_Rep2 1037.43016884485 1037.42957496793 40.814 1 0.11597589309747726 0.00132054489852655 0.006602697213854676 ['ENSG00000135249|ENST00000257700|RINT1'] 134646 21268 VYSQFITQL True PC9_epitope_Rep5 1097.5757108797297 1097.57517496793 86.858 1 0.11596821719753347 0.00132054489852655 0.006603852345169552 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 17490 7219 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.53465490379 32.779 3 0.11596294658881956 0.00132054489852655 0.006604645622666703 ['ENSG00000162378|ENST00000294353|ZYG11B'] 5555 20284 AMSSKFFLV True PC9_epitope_Rep1 1028.5364889200398 1028.5353899358602 82.849 2 0.11595818637334482 0.00132054489852655 0.006605362160696621 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 111296 11678 THM[Oxidation]ELYSQL True PC9_epitope_Rep2 1136.51721040788 1136.5161099358602 50.251 2 0.11595753146600735 0.00132054489852655 0.006605460747446674 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 2279 7511 AENVAVPEA True NCI_RA007_Epitope_Rep3 898.4396113297399 898.43850993586 36.67 2 0.11594647753149483 0.00132054489852655 0.006607124972024851 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 76571 21196 NQLDSLMGL True PC9_epitope_Rep4 989.48518162317 989.4846349679301 89.696 1 0.11593809902839841 0.00132054489852655 0.006608386668810511 ['ENSG00000135148|ENST00000412615|TRAFD1'] 95068 19986 RTVELFYDV True PC9_epitope_Rep1 1140.5815245361598 1140.5804299358601 81.701 2 0.1159379257429659 0.00132054489852655 0.006608412765881751 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF', 'ENST00000489654.1_1_7:142960606-142961286:+|nuORF', 'ENST00000473649.1_1_7:142960606-142961786:+|nuORF', 'nc|ENSG00000197448|Q9Y2Q3-4|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-3|GSTK1', 'ENSG00000197448|ENST00000358406|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-2|GSTK1'] 11856 14941 DHIAHIIEL True PC9_epitope_Rep4 1059.57129420563 1059.57018993586 65.411 2 0.1159373661117881 0.00132054489852655 0.006608497047942368 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 34894 19453 GQLSEGAIAAI True PC9_epitope_Rep5 1028.5502244078798 1028.54912993586 79.876 2 0.1159365355500426 0.00132054489852655 0.006608622134850535 ['ENSG00000132383|ENST00000254719|RPA1'] 89505 13601 QYKDVPITY True PC9_epitope_Rep1 1125.57062549929 1125.5695299358601 57.172 2 0.1159277211710755 0.00132054489852655 0.0066099497679406455 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 78586 22121 NYSGAAEYLYF True PC9_epitope_Rep1 1296.56626839484 1296.56567496793 89.901 1 0.11592545909467285 0.00132054489852655 0.006610290526616581 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 40272 19351 HQLESILAM True PC9_epitope_Rep3 1040.5324661687598 1040.53136993586 79.655 2 0.11592267716049003 0.00132054489852655 0.006610709619973702 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 111318 14682 THMTAIVGM True PC9_epitope_Rep5 959.4568587003499 959.45630496793 61.479 1 0.11591784220979409 0.00132054489852655 0.0066114380580365026 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 7234 22277 ARDEIIWLL True PC9_epitope_Rep3 1127.63389446219 1127.63278993586 90.973 2 0.11591491104791937 0.00132054489852655 0.006611879707550305 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 35156 19569 GQWSQGLISA True PC9_epitope_Rep5 1045.5192586327698 1045.5186749679299 80.323 1 0.11590794034744598 0.00132054489852655 0.006612930125236892 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 139959 21461 YQDEVFGGF True PC9_epitope_Rep1 1060.4501760134397 1060.44967496793 87.39 1 0.11590788697396988 0.00132054489852655 0.006612938168733688 ['ENSG00000145907|ENST00000356245|G3BP1'] 15314 18680 EAFQLFDR True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 76.873 2 0.11590268496294645 0.00132054489852655 0.006613722168554359 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 121319 5927 VEVANPPA True H1975_Epitope_Rep3 795.4126683059098 795.41156993586 27.808 2 0.11589988231025046 0.00132054489852655 0.006614144596360885 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 31774 7408 GEIASFDKA True NCI_RA007_Epitope_Rep2 936.4552613938799 936.45416993586 33.441 2 0.11589748289071072 0.00132054489852655 0.006614506267987107 ['ENSG00000034510|ENST00000233143|TMSB10'] 46708 5764 ITDVKPGNY True H1975_Epitope_Rep2 1005.51311062317 1005.51200993586 27.165 2 0.11589318932468212 0.00132054489852655 0.006615153497930518 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'ENSG00000115318|ENST00000264094|LOXL3', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3'] 6126 15123 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 63.308 2 0.1158893581953111 0.00132054489852655 0.006615731070247621 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 87765 10471 QRDEKVLEL True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 45.262 2 0.11588258476387563 0.00132054489852655 0.006616752337298738 ['ENSG00000135968|ENST00000309863|GCC2'] 21262 20829 ERDRLILFL True PC9_epitope_Rep5 1173.6869926642098 1173.6853349037901 85.167 3 0.11588199686164612 0.00132054489852655 0.006616840985741541 ['ENSG00000138246|ENST00000260818|DNAJC13'] 22469 16183 ETEYSFLDY True H1975_Epitope_Rep3 1165.4815357113698 1165.48042993586 67.704 2 0.11587958989344328 0.00132054489852655 0.006617203939057435 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 132235 17115 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 70.855 2 0.1158787339645702 0.00132054489852655 0.0066173330115785346 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 1860 12019 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 51.312 1 0.1158779573928786 0.00132054489852655 0.006617450119298885 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 96401 7308 SAAAALVLK True NCI_RA007_Epitope_Rep5 842.52255310806 842.52144993586 34.787 2 0.11587717560837171 0.00132054489852655 0.006617568015152167 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 136447 15614 WVDSDQLLY True H1975_Epitope_Rep3 1137.53423999057 1137.53367496793 65.477 1 0.11586666428356414 0.00132054489852655 0.006619153358262064 ['ENSG00000116221|ENST00000360840|MRPL37'] 133341 19118 VVVDPIQSV True PC9_epitope_Rep3 954.53859709502 954.53750993586 78.76 2 0.11586623141683601 0.00132054489852655 0.0066192186521726246 ['ENSG00000115233|ENST00000409682|PSMD14'] 77480 7041 NTAQGFRTV True PC9_epitope_Rep5 992.5039429218 992.50284993586 32.05 2 0.11586436605580985 0.00132054489852655 0.006619500031658583 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 85673 10978 QGRTEVVSL True PC9_epitope_Rep3 987.5349086969098 987.53380993586 47.213 2 0.11586184016293975 0.00132054489852655 0.006619881067290929 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF'] 690 5614 AAVADPHSL True NCI_RA007_Epitope_Rep5 879.4450310633501 879.44392993586 28.283 2 0.11583193473972526 0.00132054489852655 0.006624393977326265 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000594962.5_1_19:17611587-17615418:+|nuORF', 'nc|ENSG00000130304|Q6PCB7-2|SLC27A1'] 8049 7396 ATDPTIHTV True PC9_epitope_Rep1 953.4818104948899 953.48070993586 33.262 2 0.11583000042600342 0.00132054489852655 0.006624685980001567 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 76950 14164 NRDTQELLL True PC9_epitope_Rep2 1100.58258716532 1100.5814899358602 59.751 2 0.11582492324954623 0.00132054489852655 0.0066254524866248285 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 104711 17893 SQVDRLVALA True PC9_epitope_Rep1 1070.6084079903399 1070.60730993586 73.618 2 0.11582202956297921 0.00132054489852655 0.006625889388083469 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 6525 7301 APTGDLPRA True PC9_epitope_Rep5 896.4715801643599 896.47048993586 33.045 2 0.11581784589630312 0.00132054489852655 0.006626521105913975 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 4467 12226 AIVDKVPSV True PC9_epitope_Rep4 926.54368247546 926.54258993586 54.847 2 0.11581204760001107 0.00132054489852655 0.0066273967235326815 ['ENSG00000181789|ENST00000314797|COPG1'] 62076 7255 LLDVRDRDSY True H1975_Epitope_Rep2 1250.62551460646 1250.62387490379 32.84 3 0.11581062335781024 0.00132054489852655 0.0066276118197080795 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 120356 8226 VEEFKSIPA True H1975_Epitope_Rep2 1018.5335117145798 1018.53240993586 36.592 2 0.11580069326327111 0.00132054489852655 0.006629111700878166 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 90810 7993 RESSVLLSP True H1975_Epitope_Rep3 986.53965972418 986.53856993586 35.715 2 0.11580063054510897 0.00132054489852655 0.006629121175128851 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 57558 6778 LEDRPSNLP True H1975_Epitope_Rep3 1039.52982331647 1039.5287299358602 31.026 2 0.11580023698125441 0.00132054489852655 0.006629180627468316 ['ENSG00000108239|ENST00000225235|TBC1D12'] 85787 5250 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 25.582 2 0.11579768055267932 0.00132054489852655 0.006629566817980855 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 76055 10943 NMDNM[Oxidation]FESY True H1975_Epitope_Rep3 1165.40561135357 1165.40450993586 47.179 2 0.11579504824317426 0.00132054489852655 0.006629964494413025 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 19450 6643 ELNITAAK True PC9_epitope_Rep2 858.4810822188999 858.47998993586 30.961 2 0.11579284995217458 0.00132054489852655 0.00663029661922778 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 96346 6382 RYSSM[Oxidation]AASF True PC9_epitope_Rep4 1034.44913084806 1034.4480299358602 31.634 2 0.11579137106470767 0.00132054489852655 0.006630520063364913 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 57736 8614 LEEMEAPAA True H1975_Epitope_Rep3 959.4269980407098 959.42644496793 38.126 1 0.11579008092177837 0.00132054489852655 0.006630714996193432 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 115780 8929 TSDETTLEY True H1975_Epitope_Rep1 1057.44515020265 1057.4445749679298 39.251 1 0.11577530639495945 0.00132054489852655 0.006632947735570589 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 86225 18431 QILDGVHYL True PC9_epitope_Rep4 1056.5603951687601 1056.55928993586 78.964 2 0.11577285767581905 0.00132054489852655 0.006633317858754649 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 92470 11737 RLTEEFQNV True PC9_epitope_Rep4 1134.56693710118 1134.5658499358601 52.907 2 0.1157706500458245 0.00132054489852655 0.006633651558597539 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000486040.1_1_7:2274759-2277695:-|nuORF'] 8368 12626 ATLLIFANK True NCI_RA007_Epitope_Rep4 989.59096702105 989.58986993586 55.595 2 0.1157664535828386 0.00132054489852655 0.0066342859304780585 ['ENSG00000213465|ENST00000246747|ARL2'] 73596 12476 MVVQDGIVKA True PC9_epitope_Rep3 1058.57941636118 1058.57830993586 53.015 2 0.11575870861906205 0.00132054489852655 0.0066354568778325 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 28409 11244 FRYTAGTPY True PC9_epitope_Rep4 1074.5134449763398 1074.5123499358601 51.024 2 0.1157569186111947 0.00132054489852655 0.006635727534538136 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 35984 5313 GTVIHFNNPK True NCI_RA007_Epitope_Rep5 1125.59309227937 1125.59143490379 27.13 3 0.11575638093154786 0.00132054489852655 0.006635808836054796 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 108218 18541 SYIALPLTL True NCI_RA007_Epitope_Rep3 989.57973363101 989.57918496793 81.133 1 0.11575601622104141 0.00132054489852655 0.006635863983788029 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 106371 22520 STIANVWLV True PC9_epitope_Rep1 1001.55458151233 1001.5540749679301 91.425 1 0.11575547250791028 0.00132054489852655 0.006635946199265579 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 45595 8662 IQVSQSQNV True PC9_epitope_Rep5 1001.51417325233 1001.51306993586 38.263 2 0.11575386655186046 0.00132054489852655 0.006636189043479295 ['ENST00000587366.1_1_18:55280911-55288994:-|nuORF'] 139962 21169 YQDEVFGGF True PC9_epitope_Rep2 1060.4501760134397 1060.44967496793 86.882 1 0.11575200285683723 0.00132054489852655 0.006636470872454957 ['ENSG00000145907|ENST00000356245|G3BP1'] 85045 13183 QEIEHVFLV True H1975_Epitope_Rep2 1112.5866099165999 1112.58550993586 55.833 2 0.11575066234139934 0.00132054489852655 0.00663667359312452 ['nc|ENSG00000165752|Q86UX6-2|STK32C', 'ENSG00000165752|ENST00000298630|STK32C'] 45313 14811 IPYLPITN True H1975_Epitope_Rep1 929.5222187548901 929.52167496793 62.197 1 0.11573808753710678 0.00132054489852655 0.006638575522534522 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 36134 9102 GVAPFTIAR True NCI_RA007_Epitope_Rep3 930.5287011176599 930.52760993586 42.888 2 0.11573464184653015 0.00132054489852655 0.006639096773060757 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 45726 10559 IRSDTSQIL True PC9_epitope_Rep5 1031.56112344475 1031.56002993586 45.603 2 0.11573198359848681 0.00132054489852655 0.00663949892956701 ['ENST00000485049.1_1_20:49411653-49449308:+|nuORF', 'nc|ENSG00000124243|Q8TDM0-2|BCAS4', 'ENSG00000124243|ENST00000371608|BCAS4', 'nc|ENSG00000124243|Q8TDM0-3|BCAS4', 'nc|ENSG00000124243|Q8TDM0|BCAS4'] 142495 16237 YYIFIPSKF True NCI_RA007_Epitope_Rep1 1176.6219327961599 1176.62082993586 67.266 2 0.11572436443477226 0.00132054489852655 0.006640651735877472 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 1708 9899 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 43.066 1 0.11572372278704242 0.00132054489852655 0.00664074882832351 ['ENSG00000010292|ENST00000315579|NCAPD2'] 42852 6902 IEQPNVASA True H1975_Epitope_Rep3 927.4661604307499 927.46561496793 31.509 1 0.11572307146949325 0.00132054489852655 0.006640847385392715 ['ENSG00000197070|ENST00000371421|ARRDC1'] 57865 5353 LEFEHQRAP True NCI_RA007_Epitope_Rep3 1125.55670677065 1125.5550749037902 28.062 3 0.11572024844337062 0.00132054489852655 0.006641274580836017 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 107400 19222 SVLNELPSA True PC9_epitope_Rep5 928.48656152216 928.48546993586 78.977 2 0.1157126331819645 0.00132054489852655 0.006642427096261583 ['nc|ENSG00000167608|Q7Z404|TMC4', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 103890 17179 SQADVIPAV True PC9_epitope_Rep3 898.4759968384599 898.47488993586 71.236 2 0.11571021089745903 0.00132054489852655 0.006642793732483829 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 64705 18534 LPVWLENHTA True PC9_epitope_Rep1 1178.60840799034 1178.60730993586 76.079 2 0.11570945197006563 0.00132054489852655 0.006642908607543724 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 9423 4934 AVTTVVNPK True NCI_RA007_Epitope_Rep2 927.5389314481899 927.53782993586 23.813 2 0.11570832591068408 0.00132054489852655 0.006643079057103211 ['ENSG00000150093|ENST00000302278|ITGB1'] 4317 22985 AIIPYIPTL True PC9_epitope_Rep2 999.60046907559 999.59936993586 93.906 2 0.1157023711298736 0.00132054489852655 0.00664398049213942 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 127656 9263 VPAGGAVAV True PC9_epitope_Rep4 739.42283906679 739.42229496793 43.228 1 0.11569897332473188 0.00132054489852655 0.006644494905351485 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 9111 20014 AVIPRLVQL True PC9_epitope_Rep5 1007.64915060351 1007.64804993586 82.035 2 0.1156968996932706 0.00132054489852655 0.006644808863340986 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 60600 6106 LHHDDPEVL True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 30.496 2 0.11569429385013964 0.00132054489852655 0.006645203421242386 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 93452 5383 RQHLQEVGL True NCI_RA007_Epitope_Rep3 1078.5883412520998 1078.5872499358602 28.182 2 0.11568757006921489 0.00132054489852655 0.006646221592686345 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000451943.6_1_11:61067610-61070297:-|nuORF', 'ENST00000538470.2_1_11:61067610-61070684:-|nuORF'] 6730 22177 AQAQEVFFL True PC9_epitope_Rep3 1051.53384606775 1051.53274993586 90.589 2 0.11568581276608667 0.00132054489852655 0.006646487723301492 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 139412 21200 YLPDSLTQL True PC9_epitope_Rep5 1048.54407639828 1048.5429699358601 86.593 2 0.11568190514194743 0.00132054489852655 0.006647079541329553 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 110996 13636 THASQIELL True PC9_epitope_Rep2 1010.5396597241798 1010.53856993586 57.743 2 0.11567944994324128 0.00132054489852655 0.0066474514126289835 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 52517 7978 KLDPTKTTL True PC9_epitope_Rep1 1015.5913609438701 1015.59026993586 35.51 2 0.11567624073780294 0.00132054489852655 0.006647937518406197 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000522665.5_1_8:134254200-134261004:-|nuORF', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 65690 11421 LSASFEPFSNK True NCI_RA007_Epitope_Rep2 1225.5979028762897 1225.5968099358602 49.016 2 0.11567046211453513 0.00132054489852655 0.006648812906993499 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 70938 17486 LYGKIAEAF True PC9_epitope_Rep1 1010.5436824754598 1010.54258993586 72.055 2 0.11566131580591185 0.00132054489852655 0.006650198686532461 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 21130 5812 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 27.75 2 0.11566011090457734 0.00132054489852655 0.006650381265005348 ['ENSG00000092148|ENST00000399332|HECTD1'] 11705 11072 DHADSNIVI True PC9_epitope_Rep4 982.47197408718 982.47086993586 50.366 2 0.11565920337489237 0.00132054489852655 0.0066505187860256484 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B'] 87908 11890 QRISEAYESL True PC9_epitope_Rep4 1194.5880664685797 1194.58696993586 53.51 2 0.1156563431646868 0.00132054489852655 0.006650952221369272 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 6902 14462 AQIEVVPSA True PC9_epitope_Rep2 912.4916469025999 912.49054993586 60.899 2 0.11565410986650894 0.00132054489852655 0.0066512906737573995 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 137580 4962 YEEPPQKPP True H1975_Epitope_Rep2 1083.5236753068698 1083.52256993586 24.169 2 0.1156480512588812 0.00132054489852655 0.006652208929355719 ['ENSG00000064999|ENST00000360359|ANKS1A'] 88492 21314 QSVDLVFPV True PC9_epitope_Rep4 1002.5385970950199 1002.53807496793 90.15 1 0.1156454235450489 0.00132054489852655 0.006652607229631732 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 71326 16758 LYQHAVEYF True PC9_epitope_Rep5 1168.5553097883196 1168.5542099358602 69.465 2 0.11563124687983538 0.00132054489852655 0.006654756482212178 ['ENSG00000132612|ENST00000254950|VPS4A'] 14685 19924 DVIEEYFK True PC9_epitope_Rep1 1041.50187723313 1041.5007899358602 81.456 2 0.11561462947551172 0.00132054489852655 0.006657276622297002 ['ENSG00000112306|ENST00000230050|RPS12'] 91757 11071 RKFLETVEL True NCI_RA007_Epitope_Rep2 1133.6444591458899 1133.6433699358602 47.653 2 0.11561115069249751 0.00132054489852655 0.006657804320354884 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 71392 16717 LYSEVSHLL True PC9_epitope_Rep6 1059.56006081559 1059.5589699358602 76.777 2 0.1156067364311931 0.00132054489852655 0.006658473980045169 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 140051 10226 YQHENVVEM True PC9_epitope_Rep5 1147.4968089360298 1147.49570993586 44.323 2 0.11560405430372674 0.00132054489852655 0.006658880900635645 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 52843 12522 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 53.191 2 0.11560007331763847 0.00132054489852655 0.006659484922919408 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 142322 7477 YYEEQHPEL True NCI_RA007_Epitope_Rep3 1206.5193182024198 1206.51822993586 36.532 2 0.11559529907100466 0.00132054489852655 0.006660209374330747 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 131160 13425 VTEIMSMGY True H1975_Epitope_Rep3 1029.45110461357 1029.45057496793 56.909 1 0.11558998991471427 0.00132054489852655 0.00666101508371421 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 140139 10841 YQRADFVL True NCI_RA007_Epitope_Rep4 1010.5185303567798 1010.51742993586 48.55 2 0.1155881997263251 0.00132054489852655 0.006661286781308632 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 6645 17866 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 76.762 2 0.11558162092746617 0.00132054489852655 0.006662285340741215 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 87978 17280 QRMTTQLLL True PC9_epitope_Rep5 1102.6168644990598 1102.61576993586 71.475 2 0.11557618698021274 0.00132054489852655 0.006663110239226023 ['ENSG00000110195|ENST00000393676|FOLR1'] 98290 5562 SEVPEQPSA True NCI_RA007_Epitope_Rep3 942.4294405688601 942.42834993586 28.872 2 0.11557299989040817 0.00132054489852655 0.006663594100486429 ['ENSG00000184557|ENST00000330871|SOCS3'] 111028 12370 THDEAINVL True PC9_epitope_Rep2 1010.5032742154599 1010.50216993586 52.892 2 0.115572308194627 0.00132054489852655 0.006663699117661958 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 48013 19589 IYLEVIHNL True PC9_epitope_Rep4 1112.6229954253201 1112.62188993586 83.472 2 0.11556589392164646 0.00132054489852655 0.006664673045596906 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000491074.5_1_2:183605037-183619453:+|nuORF', 'ENST00000418559.5_1_2:183605037-183617329:+|nuORF'] 114532 12183 TQAPGNPVL True PC9_epitope_Rep5 895.4763311916299 895.47578496793 51.851 1 0.11556507455677992 0.00132054489852655 0.006664797465973709 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 9438 21687 AVVEFLTSV True PC9_epitope_Rep2 963.5276980581499 963.5271449679301 88.895 1 0.11556431006942029 0.00132054489852655 0.006664913555249241 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 90255 7574 REEEVTGPVIA True H1975_Epitope_Rep3 1198.61936659686 1198.61826993586 34.115 2 0.11556423702712966 0.00132054489852655 0.006664924647002613 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 106984 9969 SVELPIVGK True NCI_RA007_Epitope_Rep3 940.5593325395998 940.55822993586 46.297 2 0.11556234220115505 0.00132054489852655 0.006665212389901177 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 31712 11202 GEGLESYVA True H1975_Epitope_Rep2 923.4236269124299 923.42307496793 48.127 1 0.11556112670555634 0.00132054489852655 0.006665396977973505 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 21717 12456 ERSPVIQTL True PC9_epitope_Rep1 1041.58185888933 1041.5807699358602 52.777 2 0.11555840286400816 0.00132054489852655 0.0066658106451197826 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 99123 12747 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 54.337 2 0.11555499489114957 0.00132054489852655 0.006666328245764418 ['ENSG00000132646|ENST00000379143|PCNA'] 8234 8642 ATGENLPRV True PC9_epitope_Rep2 955.5086939490699 955.50758993586 38.606 2 0.11555386869761952 0.00132054489852655 0.00666649929987539 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 118526 16289 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.52387496793 67.649 1 0.11555063357126448 0.00132054489852655 0.006666990697113771 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 134779 16608 VYTVVDEMF True NCI_RA007_Epitope_Rep3 1101.5052483614097 1101.5041499358601 73.109 2 0.11554667901142289 0.00132054489852655 0.006667591420022206 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 96842 5243 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 25.556 2 0.11554090423907068 0.00132054489852655 0.006668468739362148 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 118161 14945 TYIPVPAKI True PC9_epitope_Rep6 1000.5957180483199 1000.59462993586 69.49 2 0.11553919822541153 0.00132054489852655 0.006668727943133624 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 6966 20611 AQLDPEALGNI True PC9_epitope_Rep5 1139.58225281215 1139.5811499358601 84.329 2 0.11553901355980603 0.00132054489852655 0.006668756000953288 ['ENSG00000134690|ENST00000373055|CDCA8'] 43642 10686 IHADFENTC True PC9_epitope_Rep5 1048.4283950230401 1048.42728993586 46.095 2 0.11553549470937359 0.00132054489852655 0.006669290671824597 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 29776 19112 FVPEIFHRI True PC9_epitope_Rep3 1156.6393141958 1156.63765490379 78.738 3 0.11553476490895773 0.00132054489852655 0.006669401566388244 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 109615 6958 TEAEIAHIA True H1975_Epitope_Rep3 953.4818104948898 953.48070993586 31.725 2 0.11552525124712651 0.00132054489852655 0.006670847349424195 ['ENSG00000137312|ENST00000376389|FLOT1'] 86090 12248 QHSVPLQL True PC9_epitope_Rep2 920.50796567308 920.50686993586 52.423 2 0.11550548628052916 0.00132054489852655 0.006673851988488231 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 41118 17138 HTVGELIEV True PC9_epitope_Rep1 995.5287606873098 995.52766993586 70.745 2 0.11550459825954232 0.00132054489852655 0.006673987014914694 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 6658 16752 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 76.927 2 0.1155029371060852 0.00132054489852655 0.0066742396057318356 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 21504 19395 ERLSYTQLL True PC9_epitope_Rep3 1121.6080736371698 1121.6069699358602 79.826 2 0.11549652686744179 0.00132054489852655 0.006675214417621558 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 68108 5881 LTDPDGALAK True H1975_Epitope_Rep3 999.5236753068699 999.52256993586 27.632 2 0.11549535473838622 0.00132054489852655 0.006675392679514897 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 70874 22708 LYEEAFTVF True PC9_epitope_Rep5 1117.53317736141 1117.53208993586 92.351 2 0.1154917166751194 0.00132054489852655 0.006675945999635415 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 115825 8640 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41837496793 38.229 1 0.11548543707255023 0.00132054489852655 0.006676901181499894 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 48075 22103 IYM[Oxidation]DTLNIF True PC9_epitope_Rep5 1144.547447907 1144.54634993586 90.051 2 0.11548523252175406 0.00132054489852655 0.0066769322976792085 ['ENSG00000165678|ENST00000372134|GHITM'] 96722 20528 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.56298993586 85.049 2 0.11548479512093048 0.00132054489852655 0.00667699883537772 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 22406 2734 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56272993586 14.578 2 0.11548214879929562 0.00132054489852655 0.0066774014092965675 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 71219 20122 LYPEGLAQL True PC9_epitope_Rep4 1002.5385970950199 1002.53750993586 85.534 2 0.11548003248844935 0.00132054489852655 0.006677723371854195 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 8900 15383 AVFPSIVGR True PC9_epitope_Rep4 944.5443511817999 944.54324993586 67.102 2 0.11547215809934479 0.00132054489852655 0.006678921465670817 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77845 10650 NVELDPEIQ True NCI_RA007_Epitope_Rep3 1055.51350454599 1055.51297496793 48.939 1 0.11546998665031472 0.00132054489852655 0.006679251889913855 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 124972 16379 VHTTTILYL True PC9_epitope_Rep6 1059.59644632431 1059.5953499358602 75.39 2 0.1154677398048779 0.00132054489852655 0.00667959380377596 ['ENST00000476917.5_1_10:126100559-126100658:-|nuORF'] 97525 8948 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 39.372 2 0.1154660312403986 0.00132054489852655 0.006679853816083054 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 115103 9132 TRDETNYGI True PC9_epitope_Rep1 1067.4883524273098 1067.48724993586 39.978 2 0.11546301533632049 0.00132054489852655 0.006680312805608995 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 97621 5013 SEFESKVSA True H1975_Epitope_Rep2 982.4607406971398 982.4596499358599 24.365 2 0.1154603683119004 0.00132054489852655 0.006680715680712581 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 35135 19041 GQWIAETGV True PC9_epitope_Rep1 959.4712458111899 959.4706949679301 78.032 1 0.11545885358144192 0.00132054489852655 0.0066809462321601905 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 40533 13804 HRFGGLVL True PC9_epitope_Rep2 897.5184707871299 897.51736993586 58.38 2 0.1154585367053764 0.00132054489852655 0.006680994463656982 ['ENSG00000007520|ENST00000007390|TSR3'] 25507 14790 FEGIVTDLIR True NCI_RA007_Epitope_Rep1 1161.63937376545 1161.63826993586 61.588 2 0.11544862045633747 0.00132054489852655 0.006682503980408783 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 140105 9853 YQNENEVGV True PC9_epitope_Rep3 1050.4618033262998 1050.4607099358602 42.859 2 0.11544634465521995 0.00132054489852655 0.006682850464616519 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF', 'AKR1B1|p.V48M|1|0.32|ENSG00000085662|chr7:134451678-134451678|C/T|missense_variant'] 138620 3828 YIDSNNNPER True NCI_RA007_Epitope_Rep2 1220.54217890532 1220.54108993586 19.525 2 0.11544209919708413 0.00132054489852655 0.006683496870141304 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 14121 12045 DSDDQWGEY True H1975_Epitope_Rep2 1113.3886979556898 1113.3876099358602 51.41 2 0.11544093670767554 0.00132054489852655 0.006683673879205587 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None'] 21516 5145 ERMAGNEAL True PC9_epitope_Rep6 989.4600295044899 989.4589299358599 27.513 2 0.11543860005839167 0.00132054489852655 0.0066840296881489425 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 73208 19557 MRYVASYLLA True PC9_epitope_Rep2 1185.6216155263298 1185.6205099358601 80.608 2 0.11543444554107059 0.00132054489852655 0.006684662355050853 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 9677 21095 AYFDVPELI True PC9_epitope_Rep6 1065.5382627418498 1065.5371699358602 93.97 2 0.11542881148705288 0.00132054489852655 0.006685520424849277 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 70192 22382 LVQDILLNV True PC9_epitope_Rep1 1025.6120963884498 1025.61098993586 90.908 2 0.1154279561249939 0.00132054489852655 0.006685650706363158 ['ENST00000464178.1_1_1:38148797-38151999:-|nuORF', 'ENSG00000116922|ENST00000486637|C1orf109'] 21109 20664 ERADLIAYL True PC9_epitope_Rep5 1062.57095985246 1062.5703749679299 84.538 1 0.11542340316822909 0.00132054489852655 0.006686344215753899 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 106947 5789 SVEAAAELSAK True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 27.339 2 0.11541782288124885 0.00132054489852655 0.006687194304133393 ['ENSG00000159335|ENST00000309083|PTMS'] 140386 20842 YREDLDFVL True PC9_epitope_Rep3 1168.5764391557198 1168.57534993586 85.44 2 0.1154108866799503 0.00132054489852655 0.006688251095893604 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 83568 17986 PVAEYFSGV True PC9_epitope_Rep6 967.4650978015899 967.46400993586 81.81 2 0.11540853551904949 0.00132054489852655 0.006688609352937118 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 8570 16301 ATVPGLLKV True PC9_epitope_Rep2 896.5695033004799 896.56840993586 67.947 2 0.11540752959715102 0.00132054489852655 0.006688762635513453 ['ENSG00000179820|ENST00000391770|MYADM'] 5805 12821 APEEHPVLL True PC9_epitope_Rep5 1003.5338460677498 1003.53274993586 54.325 2 0.11540586186348252 0.00132054489852655 0.006689016772619991 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 76667 10932 NQSDTSVSL True PC9_epitope_Rep5 949.43525422529 949.43414993586 47.04 2 0.11539956461777723 0.00132054489852655 0.006689976461188919 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 7962 12938 ATDDITELY True H1975_Epitope_Rep1 1039.47097102767 1039.46986993586 54.843 2 0.1153962890220887 0.00132054489852655 0.006690475708808067 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 47837 18347 IYGYVAEQF True PC9_epitope_Rep6 1088.5178616504397 1088.51676993586 83.214 2 0.11539230690086236 0.00132054489852655 0.006691082689792383 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 88547 5497 QTDCAPNNGY True H1975_Epitope_Rep2 1081.4134732348898 1081.4123699358602 26.157 2 0.11538151814534045 0.00132054489852655 0.006692727451486111 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron'] 5012 19762 ALIDRMVNL True PC9_epitope_Rep2 1043.57975071435 1043.57864993586 81.402 2 0.11537882865619484 0.00132054489852655 0.006693137529260024 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 129189 10674 VQSNRILGV True PC9_epitope_Rep2 984.5716285587998 984.57052993586 46.369 2 0.11537854979869139 0.00132054489852655 0.006693180049239127 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 140733 10454 YSDASGFGY True H1975_Epitope_Rep1 965.37667672001 965.3761249679301 45.166 1 0.11537759728575167 0.00132054489852655 0.006693325289664547 ['ENSG00000090006|ENST00000396819|LTBP4', 'nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 9926 20420 AYLPVNESF True PC9_epitope_Rep5 1038.5022115863 1038.50110993586 83.58 2 0.115375573356477 0.00132054489852655 0.006693633911231101 ['ENSG00000167658|ENST00000309311|EEF2'] 142740 13757 YYQHIVTTL True PC9_epitope_Rep4 1136.5866099166 1136.58550993586 60.812 2 0.11537296372396774 0.00132054489852655 0.006694031864953805 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 7244 16338 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.5233099358602 68.09 2 0.11537033014282859 0.00132054489852655 0.0066944334940156665 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 49416 9638 KEVFLAQPV True NCI_RA007_Epitope_Rep5 1029.5858816406096 1029.58478993586 43.713 2 0.11536777937234204 0.00132054489852655 0.006694822516530983 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 107676 6793 SVQVPRNLVGK True NCI_RA007_Epitope_Rep4 1195.7037053575098 1195.70206490379 32.751 3 0.11536634919307197 0.00132054489852655 0.006695040645312553 ['ENSG00000129245|ENST00000250113|FXR2'] 95722 10187 RYGLVTNEI True NCI_RA007_Epitope_Rep1 1063.56620882519 1063.5651099358602 43.636 2 0.11536317593084365 0.00132054489852655 0.006695524651139846 ['ENSG00000115267|ENST00000649979|IFIH1'] 111894 14774 TIPEAFRGV True PC9_epitope_Rep2 988.5341804209198 988.53308993586 62.093 2 0.11536100557735997 0.00132054489852655 0.0066958557066288385 ['ENSG00000213719|ENST00000375784|CLIC1'] 53988 14432 KVDVEVPDV True PC9_epitope_Rep2 998.5284263341398 998.5273299358599 60.781 2 0.11535607006193373 0.00132054489852655 0.006696608606111726 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 306 10272 AAHIFNEAL True NCI_RA007_Epitope_Rep5 984.50288029264 984.50178993586 46.142 2 0.11535597267743893 0.00132054489852655 0.00669662346267984 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 46985 6940 ITQGTPLKY True H1975_Epitope_Rep2 1019.5651461960299 1019.56404993586 31.615 2 0.1153351330998052 0.00132054489852655 0.00669980339782013 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 89720 9956 RADDTFEAL True NCI_RA007_Epitope_Rep2 1036.48253877088 1036.48197496793 43.353 1 0.11532517852451424 0.00132054489852655 0.006701322895825726 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 97523 8758 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 38.651 2 0.11532394030621282 0.00132054489852655 0.006701511924822084 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 71262 22032 LYPQFMFHL True PC9_epitope_Rep5 1194.5895871220598 1194.58848993586 89.773 2 0.11532327831731948 0.00132054489852655 0.0067016129875573675 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 133356 20697 VVVGDLVEV True PC9_epitope_Rep2 927.5276980581499 927.5271449679301 85.047 1 0.11532318358101992 0.00132054489852655 0.006701627450624444 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 98930 10957 SHAELETAL True PC9_epitope_Rep5 969.47672511445 969.47562993586 47.136 2 0.11531828503149397 0.00132054489852655 0.0067023753367783795 ['ENST00000469694.5_1_2:241381745-241403123:+|nuORF', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENSG00000063660|ENST00000264039|GPC1'] 111635 15955 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.5641099358602 66.825 2 0.11531659923977453 0.00132054489852655 0.006702632733825903 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 31561 10250 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43872496793 44.432 1 0.1153165845931483 0.00132054489852655 0.0067026349702049735 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 74350 7198 NEQGSYVVA True H1975_Epitope_Rep3 965.4454249861698 965.44432993586 32.662 2 0.1153060600901684 0.00132054489852655 0.006704242133792491 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 28859 21674 FTDDQWLNV True PC9_epitope_Rep5 1136.51383889916 1136.51274993586 88.417 2 0.11530493671853018 0.00132054489852655 0.0067044137024452706 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 75195 16552 NIDINNNEL True PC9_epitope_Rep2 1057.5040024914501 1057.50290993586 68.906 2 0.1153041745041679 0.00132054489852655 0.006704530115230176 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 85411 4542 QEVSRIPAS True NCI_RA007_Epitope_Rep4 985.5192586327698 985.51816993586 23.873 2 0.11530279598163641 0.00132054489852655 0.0067047406615775955 ['ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000494610.1_1_22:38690075-38690477:-|nuORF'] 22342 5094 ETDRGMSAEY True H1975_Epitope_Rep1 1157.46590273057 1157.46480993586 24.665 2 0.11528596429698174 0.00132054489852655 0.006707311939237404 ['ENSG00000100347|ENST00000350028|SAMM50'] 43847 13445 IHSPVVNEL True PC9_epitope_Rep5 1006.54474510462 1006.54364993586 56.732 2 0.11528549499977549 0.00132054489852655 0.006707383644747626 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 48055 23177 IYLTFPVAM True PC9_epitope_Rep3 1053.55689001145 1053.55578993586 94.42 2 0.11527771212428928 0.00132054489852655 0.006708572925296317 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 8107 12351 ATDYTFAM[Oxidation]Y True H1975_Epitope_Rep2 1097.43756310485 1097.43697496793 52.593 1 0.11527287070034595 0.00132054489852655 0.006709312833829585 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 99321 13204 SHSPPLLQV True PC9_epitope_Rep2 976.53418042092 976.53308993586 56.068 2 0.11527088846338665 0.00132054489852655 0.00670961579941238 ['ENSG00000165030|ENST00000297689|NFIL3'] 21143 19157 ERAPSLLSL True PC9_epitope_Rep3 984.5603951687599 984.55928993586 78.908 2 0.1152660398117998 0.00132054489852655 0.006710356924545804 ['ENST00000548091.5_1_12:93965167-93966593:+|nuORF', 'ENST00000549122.5_1_12:93965649-93966593:+|nuORF', 'ENST00000547229.1_1_12:93966071-93966593:+|nuORF', 'ENST00000536696.6_1_12:93964876-93966593:+|nuORF'] 115155 9212 TRDGVLKL True PC9_epitope_Rep5 900.5392658013599 900.53816993586 40.38 2 0.11526468510468282 0.00132054489852655 0.00671056400818908 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 41419 8002 HYGQSGISM True PC9_epitope_Rep2 978.4229157197799 978.42180993586 36.141 2 0.11526159200032862 0.00132054489852655 0.006711036850508188 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 132223 16119 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 69.941 2 0.11525786882847897 0.00132054489852655 0.006711606054079111 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 87737 6813 QRAPGQQVL True PC9_epitope_Rep5 995.5512274673898 995.55012993586 31.177 2 0.11525580964383088 0.00132054489852655 0.006711920885175802 ['ENSG00000140987|ENST00000396852|ZSCAN32'] 29415 15285 FVDRGFYSV True PC9_epitope_Rep4 1088.52909504048 1088.5279899358602 66.723 2 0.11525562659561592 0.00132054489852655 0.006711948872321408 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 2083 12516 AELENLVNQAA True H1975_Epitope_Rep1 1170.58806646858 1170.58747496793 53.184 1 0.11524672184248412 0.00132054489852655 0.006713310500969417 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 15905 4736 EDKYEEEIK True NCI_RA007_Epitope_Rep2 1181.5451985970901 1181.54356490379 23.052 3 0.1152418826859094 0.00132054489852655 0.006714050570524223 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 74991 7310 NHQGTYVL True PC9_epitope_Rep4 930.4559301002199 930.45482993586 35.447 2 0.11523790276753411 0.00132054489852655 0.006714659293120033 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 98654 9314 SGAPHAILL True H1975_Epitope_Rep3 877.5021520166499 877.50104993586 40.821 2 0.11523773304465111 0.00132054489852655 0.006714685253174875 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 106315 6585 STFSAPLNK True NCI_RA007_Epitope_Rep4 963.50254593947 963.50144993586 31.955 2 0.11522805722337627 0.00132054489852655 0.0067161653849136865 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 40640 8015 HRNEVTVEL True PC9_epitope_Rep2 1095.56727145435 1095.5661699358602 36.191 2 0.11522701323387158 0.00132054489852655 0.006716325105242411 ['ENSG00000102753|ENST00000261667|KPNA3'] 105085 9778 SRDTTMYAV True PC9_epitope_Rep3 1042.47534521546 1042.4742499358601 42.565 2 0.11522513949907166 0.00132054489852655 0.006716611777859219 ['ENSG00000165688|ENST00000371717|PMPCA'] 68620 22679 LTIDDGIFEV True PC9_epitope_Rep2 1120.56520576568 1120.56467496793 92.729 1 0.11522259231634023 0.00132054489852655 0.006717001503913736 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 40458 10056 HRDERVLSL True PC9_epitope_Rep3 1123.60980497267 1123.60816490379 43.636 3 0.1152193927303551 0.00132054489852655 0.006717491080623261 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 7315 8738 ARNTVTQVL True PC9_epitope_Rep2 1000.5665431783599 1000.56544993586 38.971 2 0.11521858890123506 0.00132054489852655 0.0067176140819914555 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 40988 11213 HTDVGLLEY True H1975_Epitope_Rep3 1045.50802524273 1045.5069299358602 48.23 2 0.11521311552091788 0.00132054489852655 0.006718451673001182 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 126360 17570 VLITTDLLAR True PC9_epitope_Rep6 1113.6757592741699 1113.67466993586 80.223 2 0.11520750767906122 0.00132054489852655 0.00671930994591047 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000461021.1_1_3:186505247-186505672:+|nuORF', 'ENST00000494445.1_1_3:186505247-186506105:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1'] 65960 15345 LSDVFPGVQY True H1975_Epitope_Rep1 1123.5549754351498 1123.55447496793 64.293 1 0.11520502178050436 0.00132054489852655 0.006719690443538426 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 40049 9064 HPTEDLVVSA True PC9_epitope_Rep6 1066.5294889632999 1066.52838993586 44.928 2 0.11520422718171754 0.00132054489852655 0.006719812071160979 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 31409 9160 GDYPLEAVR True NCI_RA007_Epitope_Rep1 1018.5083595959 1018.50726993586 39.631 2 0.11520348207854783 0.00132054489852655 0.006719926124533558 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 129700 11707 VRPPVQVY True PC9_epitope_Rep5 956.5443511817998 956.54324993586 50.029 2 0.11519600984177539 0.00132054489852655 0.006721070008164036 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 1983 12359 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47511496793 52.624 1 0.11518636201701503 0.00132054489852655 0.00672254722047353 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 47203 4416 IVAGTLTNK True NCI_RA007_Epitope_Rep5 915.53893144819 915.53782993586 23.617 2 0.11518594883455015 0.00132054489852655 0.006722610491335713 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 38081 10097 HAVGDIPGV True PC9_epitope_Rep6 863.45011644379 863.44900993586 49.444 2 0.11518348114783328 0.00132054489852655 0.006722988381632918 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 115452 12323 TRMQDTSVSF True PC9_epitope_Rep5 1170.5339227207398 1170.53282993586 52.392 2 0.11517664587152474 0.00132054489852655 0.006724035212473165 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 135391 7170 WHDAENQTV True PC9_epitope_Rep5 1098.47303671634 1098.47192993586 32.546 2 0.11517003824536376 0.00132054489852655 0.006725047328988462 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 8637 14857 AVADDFCKV True PC9_epitope_Rep1 966.44806783846 966.44696993586 61.968 2 0.1151654729065017 0.00132054489852655 0.00672574670666971 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 105313 11268 SRPENAIIY True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 48.349 2 0.11516228721158142 0.00132054489852655 0.006726234774505764 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 89402 9661 QYAPSTAQF True NCI_RA007_Epitope_Rep4 1011.4661604307499 1011.46506993586 44.011 2 0.11515795943508288 0.00132054489852655 0.006726897871321855 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 74959 13158 NHMPSSINL True PC9_epitope_Rep5 1011.48076494907 1011.47966993586 55.616 2 0.11515026944474933 0.00132054489852655 0.006728076279301946 ['ENSG00000177485|ENST00000557385|ZBTB33'] 1529 6312 AEEPASVTP True H1975_Epitope_Rep2 899.42362691243 899.42252993586 29.215 2 0.1151502280060937 0.00132054489852655 0.006728082629871807 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF', 'MIA3|p.T1568Lfs*50|1|0.04|ENSG00000154305|chr1:222658815-222658816|-/CTGTCCTTTAGGAT|frameshift_variant'] 42834 6357 IEQETPVSA True H1975_Epitope_Rep2 972.4763907612798 972.47584496793 29.38 1 0.11515003096858181 0.00132054489852655 0.006728112826406129 ['ENST00000395449.7_1_11:47187835-47198404:-|nuORF', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 40451 17523 HRDDELYIL True PC9_epitope_Rep3 1172.5825871653199 1172.5814899358602 72.586 2 0.11514941285035767 0.00132054489852655 0.006728207555558844 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 133133 19065 VVQPLLVSV True PC9_epitope_Rep6 952.5957180483199 952.59516496793 85.978 1 0.11514575625190836 0.00132054489852655 0.006728767970778453 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 42839 13857 IEQFPGIEP True H1975_Epitope_Rep2 1028.5178616504397 1028.51727496793 58.447 1 0.11514190603424497 0.00132054489852655 0.006729358109365689 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1'] 41601 4612 IADGYEQAAR True NCI_RA007_Epitope_Rep5 1092.5199869087598 1092.5188899358602 24.414 2 0.11513248371942424 0.00132054489852655 0.00673080251819172 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 77370 12299 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45877496793 52.392 1 0.11513191567489711 0.00132054489852655 0.006730889607114312 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 35127 18826 GQWASVIRV True PC9_epitope_Rep3 1014.5610638750999 1014.55996993586 77.638 2 0.11512916387286937 0.00132054489852655 0.00673131151115045 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 98077 6831 SEQVTRWAA True H1975_Epitope_Rep2 1046.5145076054998 1046.5134099358602 31.195 2 0.11512661428363442 0.00132054489852655 0.006731702435020889 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF', 'ENST00000487266.1_1_21:27107719-27124637:+|nuORF'] 73047 18669 MRDPIRILV True PC9_epitope_Rep3 1111.65358436095 1111.65248993586 77.027 2 0.11512550540943217 0.00132054489852655 0.006731872463564995 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 49854 7258 KIDEHHFVAV True PC9_epitope_Rep6 1193.6193070272102 1193.61766490379 37.044 3 0.11512315932651751 0.00132054489852655 0.006732232212501052 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 131002 10208 VTDPSTLEQY True H1975_Epitope_Rep3 1151.53463391339 1151.5340749679299 44.31 1 0.11511643701984328 0.00132054489852655 0.006733263116126331 ['ENSG00000197081|ENST00000356956|IGF2R'] 124718 17367 VHAELADVL True PC9_epitope_Rep3 965.5181960036099 965.51708993586 71.973 2 0.11511466509582288 0.00132054489852655 0.0067335348762082945 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'CCT6B|p.I363*|1|0.11|ENSG00000132141|chr17:34939308-34939309|AT/-|frameshift_variant', 'CCT6B|p.E364Rfs*28|1|0.12|ENSG00000132141|chr17:34939306-34939306|C/-|frameshift_variant', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 2265 7666 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 34.439 2 0.11511137621109012 0.00132054489852655 0.006734039320886656 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 137870 10353 YETDNNIVV True H1975_Epitope_Rep3 1065.49785448185 1065.4967499358602 44.877 2 0.11510827345367862 0.00132054489852655 0.006734515251271312 ['ENSG00000150787|ENST00000280362|PTS'] 138363 15291 YHGAEIVSL True PC9_epitope_Rep1 987.50254593947 987.50144993586 63.638 2 0.11509221310238862 0.00132054489852655 0.006736979262887023 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 64871 18662 LQDVPLSSV True PC9_epitope_Rep1 956.51786165044 956.51676993586 76.571 2 0.11508912363388929 0.00132054489852655 0.006737453355853586 ['ENST00000524576.5_1_11:66203480-66233392:-|nuORF', 'nc|ENSG00000174547|Q9Y3B7-2|MRPL11', 'nc|ENSG00000174547|Q9Y3B7-3|MRPL11', 'ENSG00000174547|ENST00000310999|MRPL11'] 75208 12098 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 51.618 2 0.11508646867422252 0.00132054489852655 0.006737860797366422 ['ENSG00000116285|ENST00000377482|ERRFI1'] 104218 10765 SQHGVIIQL True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 48.257 2 0.1150804781910636 0.00132054489852655 0.006738780210595555 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 57550 7060 LEDRPANLP True H1975_Epitope_Rep1 1023.53490869691 1023.53380993586 32.188 2 0.11507523939133833 0.00132054489852655 0.006739584356137426 ['nc|ENSG00000132405|Q9P2M4-2|TBC1D14', 'ENSG00000132405|ENST00000409757|TBC1D14'] 47604 8669 IVVVTAGVR True PC9_epitope_Rep6 912.5756513100798 912.57454993586 43.189 2 0.1150707031795809 0.00132054489852655 0.0067402807311171 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 140416 15574 YRFNGQYSSL True PC9_epitope_Rep3 1233.5778361380499 1233.5767299358602 65.054 2 0.11506579579157032 0.00132054489852655 0.006741034165820162 ['ENST00000592618.5_1_19:1010351-1011343:-|nuORF', 'ENSG00000182087|ENST00000356663|TMEM259'] 47833 19499 IYGYVAEQF True PC9_epitope_Rep4 1088.5178616504397 1088.51676993586 83.121 2 0.11506061196012668 0.00132054489852655 0.006741830131952531 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 89880 8087 RAYDGTTYL True H1975_Epitope_Rep2 1058.50327421546 1058.5021699358601 36.053 2 0.1150507606867687 0.00132054489852655 0.006743343025399718 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 9809 12318 AYLEAHETF True PC9_epitope_Rep4 1079.4923751785898 1079.4912699358601 55.191 2 0.1150455412649782 0.00132054489852655 0.006744144723378842 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 74968 6217 NHNSQVWRV True PC9_epitope_Rep2 1138.5631891334199 1138.56154490379 29.311 3 0.11504445770162135 0.00132054489852655 0.006744311169237335 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 104286 14977 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.57494993586 69.619 2 0.11504061537224579 0.00132054489852655 0.0067449014205291586 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 38495 4707 HEQPGQGIAP True H1975_Epitope_Rep3 1032.4988575413597 1032.49776993586 23.231 2 0.11503814797265643 0.00132054489852655 0.006745280484200531 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 117172 22107 TVLEQVLPI True PC9_epitope_Rep2 1010.6011973515798 1010.6006749679301 90.509 1 0.11503787375966014 0.00132054489852655 0.006745322612495788 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 52749 13910 KMWEEAISL True NCI_RA007_Epitope_Rep1 1105.5477818797299 1105.54668993586 58.129 2 0.11503643526066512 0.00132054489852655 0.006745543618282106 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 26233 7672 FHDSAVTSV True PC9_epitope_Rep2 961.45051036661 961.44940993586 34.879 2 0.1150363154759102 0.00132054489852655 0.006745562021896218 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 137807 11088 YEQLSSEALEA True H1975_Epitope_Rep3 1238.56666231766 1238.56607496793 47.743 1 0.11503231176326885 0.00132054489852655 0.00674617717650849 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 134707 21701 VYTPTDTLVF True PC9_epitope_Rep3 1154.5859412102598 1154.5848499358601 88.765 2 0.11503044168165569 0.00132054489852655 0.0067464645258270405 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 71189 13728 LYNPKITSEL True PC9_epitope_Rep6 1176.63903941228 1176.6379499358602 64.593 2 0.11502745543711566 0.00132054489852655 0.006746923404968133 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 121382 6180 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51676993586 28.782 2 0.11502639189998375 0.00132054489852655 0.006747086839967659 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 89727 9745 RADDTFEAL True NCI_RA007_Epitope_Rep5 1036.48253877088 1036.4814499358602 44.123 2 0.1150136063665387 0.00132054489852655 0.006749051909004307 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 141819 20346 YVDDQLFVFY True H1975_Epitope_Rep2 1307.60740493083 1307.60630993586 84.314 2 0.11501301066649396 0.00132054489852655 0.006749143478514753 ['nc|ENSG00000010704|Q30201-9|HFE', 'ENST00000486147.1_1_6:26087668-26093021:+|nuORF', 'ENST00000483782.1_1_6:26087668-26091517:+|nuORF', 'nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE'] 4699 16712 ALATLIHQV True PC9_epitope_Rep3 964.5705659296401 964.56946993586 69.418 2 0.11501216017657218 0.00132054489852655 0.00674927421577531 ['ENSG00000111652|ENST00000543155|COPS7A'] 98614 10851 SFVLNLGK True H1975_Epitope_Rep1 876.5069030439199 876.50580993586 46.697 2 0.11501076283001893 0.00132054489852655 0.0067494890211473955 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 9860 11934 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 51.226 2 0.11499962750843616 0.00132054489852655 0.0067512010220834254 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 77510 10606 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4608749679298 45.75 1 0.11499353193912877 0.00132054489852655 0.006752138364574371 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 706 12153 AAVDATVNQVL True NCI_RA007_Epitope_Rep5 1099.58733819259 1099.58624993586 53.401 2 0.11498988249265009 0.00132054489852655 0.006752699616515145 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 96165 13770 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65458993586 60.86 2 0.11498689395990777 0.00132054489852655 0.006753159259643044 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 121318 5930 VEVANPPA True H1975_Epitope_Rep2 795.4126683059098 795.41156993586 27.794 2 0.11497760922285082 0.00132054489852655 0.0067545874672328135 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 107131 18151 SVIDHIHLI True PC9_epitope_Rep2 1045.59202965021 1045.59092993586 75.12 2 0.11497140536053296 0.00132054489852655 0.00675554192848253 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 2445 11645 AEQIVPLSA True H1975_Epitope_Rep3 926.5072969667399 926.50618993586 49.927 2 0.11496566981850627 0.00132054489852655 0.0067564244554495795 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 14670 6187 DVGKDQEFTVK True NCI_RA007_Epitope_Rep1 1264.6299312805597 1264.62829490379 28.101 3 0.11496514855559664 0.00132054489852655 0.006756504667645432 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 103694 6640 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 30.564 2 0.1149597065959701 0.00132054489852655 0.006757342134350805 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 6380 6066 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 28.323 2 0.11493886258464363 0.00132054489852655 0.006760550765817725 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 128361 7440 VPQTPLHTA True PC9_epitope_Rep5 962.5185303567798 962.51742993586 33.572 2 0.1149370048639348 0.00132054489852655 0.006760836806649775 ['ENSG00000114738|ENST00000621469|MAPKAPK3'] 85174 5578 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47687496793 26.497 1 0.11493314181321979 0.00132054489852655 0.006761431653966103 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 2099 10192 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.44834993586 44.208 2 0.11492529635833691 0.00132054489852655 0.006762639883595827 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 49350 6494 KESEMNVIA True H1975_Epitope_Rep3 1019.4957463068698 1019.49464993586 29.949 2 0.11492135900308018 0.00132054489852655 0.006763246330196134 ['ENSG00000148411|ENST00000277554|NACC2'] 74936 12770 NHLGGGAVVL True PC9_epitope_Rep3 935.51886470995 935.51776993586 54.141 2 0.11491988214812632 0.00132054489852655 0.006763473814701534 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 96017 14882 RYLPDTLLL True NCI_RA007_Epitope_Rep5 1102.63864548946 1102.63754993586 63.913 2 0.11491426183157832 0.00132054489852655 0.0067643395972997915 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 121809 16817 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 69.838 2 0.11491285099789912 0.00132054489852655 0.006764556946314347 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 105119 13387 SREPSQVIF True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 56.509 2 0.11491198254907753 0.00132054489852655 0.006764690740437594 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 100730 10733 SLDVGGPLRY True H1975_Epitope_Rep1 1075.56620882519 1075.5651099358602 46.246 2 0.11491192184056924 0.00132054489852655 0.006764700093349289 ['ENSG00000176894|ENST00000317479|PXMP2'] 102710 9408 SMDEKVELY True H1975_Epitope_Rep3 1112.5059766374 1112.5048699358601 41.188 2 0.11490162153667292 0.00132054489852655 0.0067662871670321825 ['ENSG00000131143|ENST00000253452|COX4I1'] 1817 7426 AEIAESVQA True H1975_Epitope_Rep2 916.45017601344 916.44906993586 33.509 2 0.11489212616707095 0.00132054489852655 0.0067677505366452945 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 76596 20097 NQMDGFDTL True PC9_epitope_Rep3 1039.4280606698699 1039.4269699358601 82.555 2 0.11489043599411296 0.00132054489852655 0.006768011048233243 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 118441 18081 TYPENWRAF True PC9_epitope_Rep5 1182.5458077337798 1182.54470993586 74.562 2 0.11488747540527727 0.00132054489852655 0.006768467396429358 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 16592 9507 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39177496793 41.538 1 0.1148843602402775 0.00132054489852655 0.006768947603428327 ['ENSG00000026025|ENST00000544301|VIM'] 134902 19063 VYVSDIQEL True PC9_epitope_Rep4 1064.5389910178399 1064.5378899358602 81.416 2 0.11487933848700976 0.00132054489852655 0.006769721783332425 ['ENSG00000132182|ENST00000254508|NUP210'] 128944 20979 VQIGDIVTV True PC9_epitope_Rep3 942.5385970950199 942.5380449679301 85.976 1 0.11486352884860945 0.00132054489852655 0.006772159642090385 ['ENSG00000142534|ENST00000270625|RPS11'] 54474 19749 KYGPVFSF True PC9_epitope_Rep3 943.4803539429099 943.47924993586 81.192 2 0.11486280272569294 0.00132054489852655 0.006772271631301429 ['ENSG00000001630|ENST00000003100|CYP51A1'] 33358 6879 GKTVISQSL True NCI_RA007_Epitope_Rep4 931.5338460677499 931.53274993586 33.077 2 0.11485951303127231 0.00132054489852655 0.0067727790201201786 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 78002 21099 NVPEGLLATV True PC9_epitope_Rep5 1011.56006081559 1011.55896993586 86.222 2 0.11485890575827559 0.00132054489852655 0.0067728726874253355 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 68073 17257 LTDLVDDNYFY True H1975_Epitope_Rep3 1376.6136125100802 1376.6130749679298 72.024 1 0.11485796853158692 0.00132054489852655 0.006773017250082631 ['ENSG00000174231|ENST00000304992|PRPF8'] 40603 15211 HRIFEPNCL True PC9_epitope_Rep5 1127.5545985956699 1127.5529549037901 63.518 3 0.1148564547988718 0.00132054489852655 0.006773250742320264 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF'] 116470 7047 TTLTSQYIK True NCI_RA007_Epitope_Rep3 1053.57062549929 1053.5695299358601 34.837 2 0.11485644528378491 0.00132054489852655 0.006773252210040655 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 38325 9658 HEGPVWQV True H1975_Epitope_Rep3 950.46101548066 950.45990993586 42.168 2 0.1148542661302784 0.00132054489852655 0.006773588356783007 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 66089 5215 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 25.127 3 0.11485158524915634 0.00132054489852655 0.00677400192007798 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 73100 20848 M[Oxidation]RFLAATFL True PC9_epitope_Rep5 1084.57393743836 1084.57282993586 85.241 2 0.11485003343778859 0.00132054489852655 0.006774241319828311 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 63569 13738 LMDHTIPEV True PC9_epitope_Rep6 1053.51648175145 1053.5153899358602 64.635 2 0.1148494977005621 0.00132054489852655 0.006774323970543862 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 7350 7425 ARPSSTITY True PC9_epitope_Rep1 994.5083595959 994.50726993586 33.376 2 0.11484899818327822 0.00132054489852655 0.006774401034320064 ['ENSG00000159596|ENST00000372025|TMEM69'] 74601 19788 NGFPVFATV True PC9_epitope_Rep6 950.48616759934 950.48561496793 88.77 1 0.11484547732551048 0.00132054489852655 0.006774944244076249 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 60509 6543 LHAQGDPAL True PC9_epitope_Rep2 920.4715801643599 920.47048993586 30.581 2 0.11484427305545825 0.00132054489852655 0.006775130052614155 ['ENSG00000257365|ENST00000246166|FNTB', 'nc|ENSG00000257365|P49356-2|FNTB'] 87744 8546 QRAQMTAAL True PC9_epitope_Rep5 988.5123994305198 988.51130993586 37.816 2 0.1148437741922596 0.00132054489852655 0.006775207024376165 ['ENSG00000114315|ENST00000232424|HES1'] 95220 16288 RVLDELTLA True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 75.013 2 0.1148349712173335 0.00132054489852655 0.006776565413239447 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 6167 9581 APNLQNQQV True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 41.71 2 0.11483201911240705 0.00132054489852655 0.006777021012391198 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 54330 12809 KYDPNVYSI True PC9_epitope_Rep4 1097.53932537101 1097.53822993586 57.13 2 0.11483104101790001 0.00132054489852655 0.006777171968543412 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 57757 8048 LEEPKVISA True H1975_Epitope_Rep3 984.54916177872 984.54806993586 35.93 2 0.11482047765308394 0.00132054489852655 0.006778802494514342 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant'] 62075 7219 LLDVRDRDSY True H1975_Epitope_Rep1 1250.62551460646 1250.62440993586 32.778 2 0.11481837478075961 0.00132054489852655 0.006779127132393408 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 117045 21631 TVIATNILL True PC9_epitope_Rep5 956.59063266788 956.59008496793 88.246 1 0.11481434643591451 0.00132054489852655 0.006779749063646139 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 59019 13627 LEVNLQAMK True PC9_epitope_Rep4 1044.5637662970398 1044.5626699358602 60.309 2 0.11480477537497998 0.00132054489852655 0.006781226950376395 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 115700 8817 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.5853349679301 38.299 1 0.11480395340306186 0.00132054489852655 0.006781353887301284 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 140257 18079 YRAPELLL True PC9_epitope_Rep4 973.5596668927699 973.55856993586 77.603 2 0.11479965530377126 0.00132054489852655 0.006782017679328263 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 90535 8321 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64402993586 39.848 2 0.11479783576173408 0.00132054489852655 0.006782298705694794 ['ENSG00000127540|ENST00000591899|UQCR11'] 68632 22637 LTIEDGIFEV True PC9_epitope_Rep2 1134.58085582982 1134.57974993586 92.567 2 0.11479636057740486 0.00132054489852655 0.006782526554676357 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 36657 21815 GVIGGGVFQAI True PC9_epitope_Rep5 1016.5654805491998 1016.56438993586 88.944 2 0.11479084274899728 0.00132054489852655 0.006783378874489016 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 26991 21085 FLEKLLPPV True PC9_epitope_Rep5 1054.6426682407398 1054.6415699358602 86.166 2 0.11478536469817066 0.00132054489852655 0.006784225152915617 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 1796 9267 AEHGLLLTA True H1975_Epitope_Rep3 923.50763131991 923.50652993586 40.637 2 0.11477058779429423 0.00132054489852655 0.006786508479098698 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1'] 40258 19517 HQLALISQL True PC9_epitope_Rep3 1021.59202965021 1021.59092993586 80.304 2 0.11476586730133576 0.00132054489852655 0.0067872380466587785 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 71221 20971 LYPEGLAQL True PC9_epitope_Rep5 1002.5385970950199 1002.53807496793 85.725 1 0.11476351846926723 0.00132054489852655 0.006787601094689138 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 71 13001 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44850496793 55.243 1 0.11475951313175858 0.00132054489852655 0.0067882202245577745 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 111116 8531 THEEAVTAL True PC9_epitope_Rep5 969.4767251144499 969.47562993586 37.757 2 0.11475382061298675 0.00132054489852655 0.006789100246886735 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 20961 13400 EQPYKWEKF True PC9_epitope_Rep5 1253.6080736371698 1253.60641490379 56.56 3 0.1147436996563644 0.00132054489852655 0.006790665147426524 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 17512 12141 EHFPQAYSV True PC9_epitope_Rep4 1076.49270953176 1076.4916099358602 54.515 2 0.11474225119471591 0.00132054489852655 0.0067908891369711415 ['ENSG00000076201|ENST00000265562|PTPN23'] 96350 16477 RYSTGLAGNLL True PC9_epitope_Rep4 1163.6298717109098 1163.6287699358602 71.35 2 0.11474187134370703 0.00132054489852655 0.0067909478781708315 ['ENSG00000168802|ENST00000448552|CHTF8'] 9879 11049 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 53.41 2 0.11473963262967418 0.00132054489852655 0.006791294089062678 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 93090 8490 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 37.492 2 0.11473378379172401 0.00132054489852655 0.006792198676474475 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 33222 8077 GKDGYNYTL True NCI_RA007_Epitope_Rep5 1029.47672511445 1029.47562993586 37.757 2 0.11471113644658612 0.00132054489852655 0.006795702442703217 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 87522 19042 QQHSILLLL True PC9_epitope_Rep6 1063.6389798426299 1063.6378899358601 85.889 2 0.11471064669539613 0.00132054489852655 0.006795778231401138 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 128541 4854 VPSYPSKSA True PC9_epitope_Rep3 934.47599683846 934.47488993586 23.768 2 0.11470798544595322 0.00132054489852655 0.006796190072480467 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 105325 18816 SRPPLLGF True PC9_epitope_Rep1 885.50723739709 885.50614993586 77.162 2 0.11470334026616405 0.00132054489852655 0.006796908994357681 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 134858 19466 VYVGSGGWRF True PC9_epitope_Rep5 1126.5559784946597 1126.55488993586 79.929 2 0.11470126065004914 0.00132054489852655 0.006797230874840445 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000598424.5_1_19:17581379-17594898:+|nuORF'] 89674 19923 QYVVDLTSF True PC9_epitope_Rep6 1070.5284263341398 1070.52732993586 89.292 2 0.11469630038658651 0.00132054489852655 0.006797998678231461 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 67821 20266 LTAFFLPGVHS True PC9_epitope_Rep4 1187.6338944621898 1187.63278993586 86.096 2 0.11469480572023806 0.00132054489852655 0.006798230055419977 ['nc|ENSG00000110400|Q15223-3|NECTIN1', 'nc|ENSG00000110400|Q15223-2|NECTIN1', 'ENSG00000110400|ENST00000264025|NECTIN1'] 44108 5011 IINSSITTK True NCI_RA007_Epitope_Rep4 975.5600608155901 975.55896993586 25.759 2 0.11469473835962495 0.00132054489852655 0.006798240483150915 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 91773 13564 RKFWAGIVF True NCI_RA007_Epitope_Rep5 1122.6338348925399 1122.6327299358602 58.861 2 0.11469323001629182 0.00132054489852655 0.006798473985664905 ['ENSG00000165029|ENST00000374736|ABCA1'] 137649 12301 YEIDKTLGI True H1975_Epitope_Rep3 1050.55972646242 1050.5586299358602 52.496 2 0.11467727818445884 0.00132054489852655 0.006800943922084322 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 45626 19390 IRDLNIVVV True PC9_epitope_Rep1 1039.6389798426299 1039.6378899358601 79.395 2 0.1146772432550427 0.00132054489852655 0.006800949331412305 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'ENST00000474535.2_1_2:38545640-38570535:-|nuORF'] 20075 12671 EMEEKYYRF True PC9_epitope_Rep5 1293.5699738762899 1293.5688699358602 53.743 2 0.11466884782766196 0.00132054489852655 0.0068022496066321774 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 137520 6363 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 29.462 1 0.11466533315929528 0.00132054489852655 0.006802794026577836 ['ENSG00000127184|ENST00000247655|COX7C'] 47583 8017 IVVNLTGR True NCI_RA007_Epitope_Rep5 870.5287011176599 870.52760993586 37.528 2 0.11466309230494995 0.00132054489852655 0.006803141155615885 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 84814 7798 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.46472993586 34.942 2 0.11465776581349586 0.00132054489852655 0.006803966347396223 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 88563 12585 QTDINLPY True H1975_Epitope_Rep2 962.4709114580198 962.46980993586 53.503 2 0.11465599793728393 0.00132054489852655 0.006804240252157256 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 9245 18483 AVPEIMDRI True PC9_epitope_Rep1 1042.5481162329 1042.5470099358602 75.885 2 0.11465190024975773 0.00132054489852655 0.006804875165912538 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 74840 12755 NHFMDNTTL True PC9_epitope_Rep2 1091.47059418819 1091.46948993586 54.367 2 0.11464989729313904 0.00132054489852655 0.0068051855337708305 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 109854 10717 TEEPEIYEP True H1975_Epitope_Rep2 1105.48153571137 1105.48042993586 46.248 2 0.1146468673996751 0.00132054489852655 0.006805655056611775 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 85983 13224 QHLAQLQQL True PC9_epitope_Rep5 1077.59309227937 1077.59198993586 55.874 2 0.11464260823823129 0.00132054489852655 0.006806315124299553 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.Q1101Lfs*31|1|0.16|ENSG00000119596|chr14:74798598-74798599|-/T|frameshift_variant', 'YLPM1|p.V675Cfs*24|1|0.33|ENSG00000119596|chr14:74782066-74782066|G/-|frameshift_variant'] 2467 6296 AEQLPGKVSC True H1975_Epitope_Rep2 1030.5117307241799 1030.5106299358602 29.155 2 0.11461573011510273 0.00132054489852655 0.006810482022078217 ['nc|ENSG00000174306|Q9H4I2-2|ZHX3', 'ENSG00000174306|ENST00000683867|ZHX3'] 109608 9151 TEAEDMISA True H1975_Epitope_Rep3 965.4011772156899 965.4006249679301 40.189 1 0.11461309908096774 0.00132054489852655 0.0068108900426805605 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 47602 10299 IVVVTAGVR True PC9_epitope_Rep1 912.5756513100798 912.57454993586 44.5 2 0.11461102736637686 0.00132054489852655 0.006811211340751337 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 31627 13068 GEFGGFGSV True NCI_RA007_Epitope_Rep3 855.3762827971899 855.37573496793 58.683 1 0.11460685733399592 0.00132054489852655 0.00681185810736594 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 98927 10981 SHAELETAL True PC9_epitope_Rep1 969.47672511445 969.47562993586 47.128 2 0.11460589207108622 0.00132054489852655 0.006812007826892551 ['ENST00000469694.5_1_2:241381745-241403123:+|nuORF', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENSG00000063660|ENST00000264039|GPC1'] 28198 13120 FREDSTLAL True PC9_epitope_Rep6 1050.53457434374 1050.53346993586 62.095 2 0.11460444571473019 0.00132054489852655 0.006812232173608059 ['ENSG00000197077|ENST00000358431|KIAA1671'] 96222 20547 RYPTSIASLAF True PC9_epitope_Rep1 1224.65027280232 1224.64916993586 83.846 2 0.11460142199708989 0.00132054489852655 0.006812701210611305 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 85432 12711 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45471496793 53.993 1 0.11460006735638063 0.00132054489852655 0.0068129113517205915 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 97815 6837 SELITKAVA True H1975_Epitope_Rep2 930.5385970950199 930.53750993586 31.215 2 0.11459854148068693 0.00132054489852655 0.0068131480635081265 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000184357|ENST00000331442|H1-5'] 98876 10654 SGVHTFPAVLQ True NCI_RA007_Epitope_Rep5 1154.6084079903399 1154.60730993586 47.617 2 0.11459643710076568 0.00132054489852655 0.006813474532780908 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3', 'CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 142573 19296 YYLNEIQSF True PC9_epitope_Rep6 1175.5498900547097 1175.54937496793 86.869 1 0.11459542350182829 0.00132054489852655 0.006813631785904747 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 76903 13943 NRDNVGLVL True PC9_epitope_Rep2 998.5508931142199 998.54978993586 58.91 2 0.11459485362998816 0.00132054489852655 0.00681372019927294 ['ENSG00000013523|ENST00000251089|ANGEL1'] 6386 6723 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 30.83 2 0.11459441696995613 0.00132054489852655 0.006813787946108513 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 75035 13184 NHSGAVVLL True PC9_epitope_Rep1 908.50796567308 908.50686993586 55.576 2 0.11459058845559655 0.00132054489852655 0.006814381959633736 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'ITGA6|p.G477Efs*22|1|0.1|ENSG00000091409|chr2:172476437-172476437|G/-|frameshift_variant', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 22445 6834 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54372993586 31.206 2 0.11459009700018773 0.00132054489852655 0.006814458215088696 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 21230 10050 ERDPRSLTL True PC9_epitope_Rep1 1085.5829215184901 1085.58182993586 43.525 2 0.11458634746173847 0.00132054489852655 0.006815040030169137 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 82655 19564 PQPDVFPLF True NCI_RA007_Epitope_Rep5 1058.54368247546 1058.5425899358602 82.147 2 0.11458242902584315 0.00132054489852655 0.006815648104582439 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 6516 7254 APTGDLPRA True PC9_epitope_Rep1 896.4715801643599 896.47048993586 32.716 2 0.11458106976278423 0.00132054489852655 0.006815859051333085 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 108328 17189 SYKNGFLNL True PC9_epitope_Rep4 1054.54474510462 1054.54364993586 74.122 2 0.11457896261055531 0.00132054489852655 0.006816186077032418 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 38258 8030 HEEEGILVA True H1975_Epitope_Rep3 995.4923751785898 995.49126993586 35.86 2 0.11457654205259375 0.00132054489852655 0.006816561761464708 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4'] 21942 10422 ESEDPDYYQY True H1975_Epitope_Rep1 1307.48299226335 1307.4824749679299 45.041 1 0.1145712072541678 0.00132054489852655 0.006817389823677483 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 45851 8404 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.43850993586 37.279 2 0.11456917617633058 0.00132054489852655 0.006817705111276142 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 92475 11596 RLTPKLMEV True PC9_epitope_Rep4 1085.6267009067699 1085.6256099358602 52.363 2 0.11456849521063245 0.00132054489852655 0.006817810821886432 ['ENSG00000147677|ENST00000521861|EIF3H'] 62768 6138 LLLQVQHASK True NCI_RA007_Epitope_Rep1 1135.67134260007 1135.66969490379 27.912 3 0.11456090952232814 0.00132054489852655 0.006818988503873437 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENST00000450250.1_1_22:42397712-42397922:-|nuORF', 'ENSG00000169100|ENST00000381401|SLC25A6'] 37591 13005 GVVPTIQKV True PC9_epitope_Rep3 939.5753169569098 939.57420993586 55.052 2 0.11454837606574139 0.00132054489852655 0.006820934762302197 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 26240 11918 FHEGDAYVV True PC9_epitope_Rep2 1035.4661604307498 1035.4650699358601 51.166 2 0.11454357636582638 0.00132054489852655 0.006821680226785047 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 78550 17176 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.53392490379 70.888 3 0.11454113990429585 0.00132054489852655 0.006822058675621655 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 73507 20456 MVGEGFIEV True PC9_epitope_Rep4 979.4684689298699 979.46792496793 86.828 1 0.1145360122566882 0.00132054489852655 0.006822855205564632 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 99398 18051 SHVDLVVMV True PC9_epitope_Rep4 997.52665251233 997.52554993586 77.498 2 0.11453066821287758 0.00132054489852655 0.006823685446657071 ['ENSG00000031698|ENST00000234677|SARS1'] 125927 18258 VLDDKLVFV True PC9_epitope_Rep6 1046.60119735158 1046.60010993586 82.871 2 0.11452531709831645 0.00132054489852655 0.006824516884554394 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 140256 18790 YRAPELLL True PC9_epitope_Rep2 973.5596668927699 973.55856993586 77.645 2 0.11452094925665292 0.00132054489852655 0.0068251956177937745 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 110363 8219 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 36.567 2 0.11451182063894251 0.00132054489852655 0.006826614355311323 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 106688 16107 STTPYLQSV True PC9_epitope_Rep5 994.4971262058599 994.49602993586 66.945 2 0.11451072157256997 0.00132054489852655 0.006826785187639357 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2'] 53950 10999 KTTTIAVEV True PC9_epitope_Rep5 960.5491617787198 960.54806993586 47.296 2 0.11450638122094355 0.00132054489852655 0.006827459866604224 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 88160 8278 QRVDSPVTV True PC9_epitope_Rep4 999.5349086969098 999.53380993586 39.302 2 0.11450440846330387 0.00132054489852655 0.006827766540139694 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 140540 17468 YRPETGSWVF True PC9_epitope_Rep6 1240.58767254576 1240.58656993586 79.814 2 0.11449629921261611 0.00132054489852655 0.006829027298041521 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 109776 10180 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.44980993586 44.159 2 0.11449307424474785 0.00132054489852655 0.006829528751673841 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 21681 4391 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 23.334 2 0.11448389651208109 0.00132054489852655 0.006830956002622394 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 106298 18179 STFPQFIKA True PC9_epitope_Rep5 1037.5545815123298 1037.5534899358602 74.936 2 0.1144760144071989 0.00132054489852655 0.006832181998618271 ['ENSG00000040487|ENST00000375153|SLC66A1'] 77198 10420 NRSNTVVIM True PC9_epitope_Rep1 1032.53861417836 1032.53750993586 44.967 2 0.11447437800202317 0.00132054489852655 0.006832436554645665 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 133128 20199 VVQPLLVSV True PC9_epitope_Rep4 952.5957180483199 952.59462993586 85.833 2 0.11447251934638952 0.00132054489852655 0.006832725694696115 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 96500 7841 SADETWDSA True NCI_RA007_Epitope_Rep3 980.37231961556 980.37122993586 37.965 2 0.11446788708322814 0.00132054489852655 0.006833446360154585 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 1732 5474 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 26.109 1 0.11446692738333951 0.00132054489852655 0.006833595674926014 ['ENSG00000161847|ENST00000617231|RAVER1'] 34798 13872 GQHEISFSV True PC9_epitope_Rep2 1002.4770594676199 1002.47596993586 58.641 2 0.11446300345953055 0.00132054489852655 0.006834206211016591 ['ZNF148|p.N574Rfs*22|1|0.11|ENSG00000163848|chr3:125233000-125233007|AAGAATTT/-|frameshift_variant', 'ENST00000497929.1_1_3:124951187-125011317:-|nuORF', 'ENSG00000163848|ENST00000360647|ZNF148'] 134696 19566 VYTKTISLW True PC9_epitope_Rep3 1109.6120963884498 1109.61098993586 80.496 2 0.11446174656437437 0.00132054489852655 0.006834401786629719 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1'] 2080 9408 AELEGLVRA True NCI_RA007_Epitope_Rep4 956.5290950404799 956.52798993586 43.047 2 0.11446141047819419 0.00132054489852655 0.006834454083289399 ['nc|ENSG00000073969|P46459-2|NSF', 'ENSG00000073969|ENST00000398238|NSF'] 23988 15734 EYM[Oxidation]EHVYLI True PC9_epitope_Rep6 1211.5532615634297 1211.55216993586 72.746 2 0.11445801633682766 0.00132054489852655 0.006834982250128763 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 121859 16873 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 70.059 2 0.1144563942603383 0.00132054489852655 0.006835234677599447 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 11760 14949 DHDGNIVEL True PC9_epitope_Rep5 1010.46688870674 1010.46578993586 62.503 2 0.11445250063509207 0.00132054489852655 0.0068358406403320315 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 68207 20177 LTDTTILQV True PC9_epitope_Rep2 1002.5597264624199 1002.55862993586 83.026 2 0.11444879109751657 0.00132054489852655 0.006836418002126459 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 118547 20245 TYQQLFYLL True NCI_RA007_Epitope_Rep4 1187.6226610721499 1187.6215699358602 87.612 2 0.11444253499828107 0.00132054489852655 0.00683739182448023 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'IQGAP2|p.L938Ffs*10|1|0.08|ENSG00000145703|chr5:76668813-76668813|C/-|frameshift_variant', 'IQGAP2|p.P1231Lfs*7|1|0.14|ENSG00000145703|chr5:76683143-76683143|C/-|frameshift_variant', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 90869 4989 REVDPPM[Oxidation]GP True H1975_Epitope_Rep1 1012.4647809121999 1012.46368993586 24.264 2 0.11443713442741578 0.00132054489852655 0.006838232583896616 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 92325 12443 RLMNDMTAV True PC9_epitope_Rep2 1049.49978614149 1049.49868993586 53.167 2 0.11443692986629636 0.00132054489852655 0.006838264431889748 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 116325 6545 TTEFSVDAR True H1975_Epitope_Rep3 1024.4825387708797 1024.4814499358602 30.143 2 0.11443674921484813 0.00132054489852655 0.00683829255752083 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 127733 13243 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.4590749679301 55.949 1 0.11443439581465535 0.00132054489852655 0.006838658968753021 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 104914 17804 SRDDNMFQI True PC9_epitope_Rep3 1124.49205790876 1124.4909699358602 73.681 2 0.11443275150202252 0.00132054489852655 0.006838914990336097 ['ENSG00000113387|ENST00000265073|SUB1'] 48212 16666 IYPVKYTQTF True PC9_epitope_Rep1 1258.65977485686 1258.6586699358602 68.934 2 0.11443262765154834 0.00132054489852655 0.006838934274390474 ['ENSG00000112378|ENST00000421351|PERP'] 120169 4066 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 20.726 2 0.11443247332291498 0.00132054489852655 0.006838958304099905 ['ENSG00000155506|ENST00000518297|LARP1'] 73492 22302 MVDGTLLLL True PC9_epitope_Rep4 973.5518046310099 973.55070993586 94.023 2 0.11442398352037184 0.00132054489852655 0.0068402803334482645 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 14189 13902 DSDSVPAFY True H1975_Epitope_Rep3 999.4185415319898 999.41744993586 58.786 2 0.11442130069208406 0.00132054489852655 0.006840698154211865 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 27262 20730 FLPSYIIDV True PC9_epitope_Rep6 1065.57464825057 1065.57354993586 92.498 2 0.11442110183785792 0.00132054489852655 0.006840729124539549 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 87338 8761 QPRYPVNSV True PC9_epitope_Rep5 1058.55089311422 1058.5497899358602 38.641 2 0.11442101605458416 0.00132054489852655 0.006840742484801015 ['ENSG00000120438|ENST00000321394|TCP1'] 87340 7029 QPRYPVNSV True PC9_epitope_Rep6 1058.55089311422 1058.5497899358602 36.038 2 0.11441755246562574 0.00132054489852655 0.006841281940427481 ['ENSG00000120438|ENST00000321394|TCP1'] 43670 13250 IHDGLTVHL True PC9_epitope_Rep3 1003.54507945779 1003.5439899358599 55.998 2 0.11441624730895379 0.00132054489852655 0.006841485229914908 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 115009 7250 TRAGPGTLSV True PC9_epitope_Rep6 957.52434401321 957.52324993586 37.014 2 0.11441599145237495 0.00132054489852655 0.006841525082486912 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 4336 5591 AIITPPPAK True NCI_RA007_Epitope_Rep5 906.5538532363399 906.55274993586 28.195 2 0.11441555402820264 0.00132054489852655 0.006841593216798685 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 71356 19028 LYRLKFNEF True PC9_epitope_Rep1 1228.6604435632 1228.65880490379 77.981 3 0.11439207446943635 0.00132054489852655 0.006845251420148497 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 100874 4259 SLESINSR True NCI_RA007_Epitope_Rep5 904.46140940348 904.46030993586 22.951 2 0.11438979035680914 0.00132054489852655 0.006845607394819195 ['ENSG00000156482|ENST00000287038|RPL30'] 7711 4942 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep1 990.4618036426001 990.46070993586 23.871 2 0.11438868962316565 0.00132054489852655 0.006845778948512094 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 78463 20346 NYMPGQLTI True PC9_epitope_Rep2 1035.5059170677498 1035.50480993586 83.683 2 0.11438752784320112 0.00132054489852655 0.006845960021043781 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 28100 19369 FQVRDIENL True PC9_epitope_Rep5 1132.58767254576 1132.58656993586 79.549 2 0.11438515132683494 0.00132054489852655 0.0068463304342700005 ['ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-5|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2'] 137548 8166 YEELQSLAGK True H1975_Epitope_Rep1 1136.5713537752797 1136.57077496793 36.352 1 0.11437600084773998 0.00132054489852655 0.006847756845805172 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 41230 12504 HVLEEVQQV True PC9_epitope_Rep3 1079.56112344475 1079.56002993586 53.122 2 0.11437113312238341 0.00132054489852655 0.006848515762952317 ['ENSG00000136026|ENST00000378026|CKAP4'] 36803 19773 GVLDTLTKV True PC9_epitope_Rep5 944.55424715916 944.55314993586 81.102 2 0.11436841967597688 0.00132054489852655 0.0068489388463053085 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 62500 21820 LLIPGLATA True PC9_epitope_Rep1 867.54295419947 867.5424049679301 88.739 1 0.11436782463759879 0.00132054489852655 0.006849031628693662 ['ENSG00000125356|ENST00000371437|NDUFA1'] 97850 12148 SELPGAFEA True NCI_RA007_Epitope_Rep5 919.4287122928699 919.42816496793 53.382 1 0.11436671944508817 0.00132054489852655 0.006849203960985994 ['ENSG00000126247|ENST00000246533|CAPNS1'] 77742 11335 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep1 1193.57505963717 1193.57396993586 48.579 2 0.11436036061653353 0.00132054489852655 0.006850195572762543 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 77357 14086 NSEITYSFY True H1975_Epitope_Rep2 1122.48695544498 1122.4858499358602 59.336 2 0.11435886596360512 0.00132054489852655 0.006850428672945491 ['PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 39037 4408 HHSDGSVSL True PC9_epitope_Rep3 937.42535824793 937.42426993586 22.057 2 0.11435799860216884 0.00132054489852655 0.006850563946749805 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 45209 17864 IPRVPSLSV True PC9_epitope_Rep1 966.5862159937799 966.58510993586 73.507 2 0.11434789086878934 0.00132054489852655 0.0068521405414195226 ['ENSG00000152464|ENST00000378197|RPP38'] 140129 15089 YQQQQSLAL True PC9_epitope_Rep3 1077.54547338061 1077.54436993586 63.176 2 0.11434486502099162 0.00132054489852655 0.006852612578803946 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 73307 8386 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46397496793 37.185 1 0.1143426596395208 0.00132054489852655 0.006852956641942968 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 31701 9212 GEGDLSISA True H1975_Epitope_Rep2 847.39232678415 847.39177496793 40.387 1 0.11434145516819812 0.00132054489852655 0.006853144559456415 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1', 'ENST00000526890.5_1_11:3039642-3048038:-|nuORF'] 129474 4975 VRKDLQNF True NCI_RA007_Epitope_Rep4 1018.5559784946599 1018.55488993586 25.609 2 0.11433501507917612 0.00132054489852655 0.006854149405106781 ['ENSG00000163220|ENST00000368738|S100A9'] 74935 11418 NHLGGGAVVL True PC9_epitope_Rep2 935.51886470995 935.51776993586 49.242 2 0.11433258765389144 0.00132054489852655 0.006854528192852123 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 107534 17581 SVPDPELIKTV True PC9_epitope_Rep3 1196.66525416012 1196.66414993586 72.813 2 0.1143319213547078 0.00132054489852655 0.006854632169109087 ['ENSG00000073756|ENST00000367468|PTGS2'] 100498 21378 SLAQYLINV True PC9_epitope_Rep4 1019.5651461960299 1019.5645749679301 90.399 1 0.11432369340802966 0.00132054489852655 0.006855916269735699 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 7449 4980 ASAIPAYSK True NCI_RA007_Epitope_Rep5 906.4810822189 906.47998993586 25.858 2 0.11432194416204919 0.00132054489852655 0.006856189297216371 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 62128 4531 LLEGEESR True NCI_RA007_Epitope_Rep2 931.4610750503099 931.45996993586 22.252 2 0.11432106454443351 0.00132054489852655 0.00685632659452154 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 26344 15214 FHSDPQHWL True PC9_epitope_Rep1 1165.53049202281 1165.52884490379 63.341 3 0.11429932355319815 0.00132054489852655 0.006859720939756147 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 90053 4879 RDYVAPTA True NCI_RA007_Epitope_Rep4 891.4450310633499 891.44392993586 25.216 2 0.11429758717541227 0.00132054489852655 0.006859992104716723 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 17236 15845 EHAEALLL True PC9_epitope_Rep3 894.4810822188999 894.47998993586 66.1 2 0.11429277604827902 0.00132054489852655 0.006860743498517007 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 26180 12373 FHDESTQVQL True PC9_epitope_Rep5 1202.5567663402999 1202.5556699358601 52.59 2 0.1142868551061823 0.00132054489852655 0.006861668331046306 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 93008 10793 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68025490379 46.505 3 0.11427540867561084 0.00132054489852655 0.006863456570678894 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 71707 6060 MEEIQNESA True H1975_Epitope_Rep2 1049.43353997313 1049.4324499358602 28.288 2 0.11427440993779399 0.00132054489852655 0.0068636126217881815 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 105410 13580 SRSPEYLSL True PC9_epitope_Rep4 1050.53457434374 1050.53346993586 60.13 2 0.11427345226070884 0.00132054489852655 0.006863762260462168 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 92802 17700 RPALPVSYLQA True PC9_epitope_Rep2 1213.68190728377 1213.68080993586 73.364 2 0.11425817930425383 0.00132054489852655 0.006866149113977716 ['ENSG00000167615|ENST00000326764|LENG8'] 88251 7273 QSDPTQSGMY True H1975_Epitope_Rep3 1112.44443901 1112.4433499358602 32.95 2 0.11425098268592396 0.00132054489852655 0.006867274078843736 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 7378 8045 ARSPTNSLL True PC9_epitope_Rep4 957.52434401321 957.52324993586 38.396 2 0.11424644573185203 0.00132054489852655 0.006867983380840672 ['ENSG00000183864|ENST00000327492|TOB2', 'nc|ENSG00000183864|Q14106-2|TOB2'] 21447 14260 ERISQSGDFL True PC9_epitope_Rep5 1150.56185172074 1150.56074993586 59.855 2 0.11424351836489512 0.00132054489852655 0.006868441079655847 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000489038.5_1_7:33016023-33032371:+|nuORF', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 104856 5580 SRAPSVATV True PC9_epitope_Rep2 886.4872302285 886.48612993586 26.853 2 0.1142425779135017 0.00132054489852655 0.006868588127119548 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 17859 21412 EHVLLVSIL True PC9_epitope_Rep5 1021.61718176889 1021.61608993586 87.425 2 0.11423917801029693 0.00132054489852655 0.006869119756001028 ['ENSG00000146909|ENST00000275820|NOM1'] 29664 21833 FVLDKVPFL True PC9_epitope_Rep2 1076.6270181766 1076.62592993586 89.456 2 0.11423691655923277 0.00132054489852655 0.006869473391925906 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 9592 20015 AYAENIALL True PC9_epitope_Rep4 976.5229470308799 976.52239496793 85.121 1 0.11423668976490549 0.00132054489852655 0.006869508858015889 ['ENSG00000196455|ENST00000356763|PIK3R4'] 118119 15478 TYHPGVPVF True PC9_epitope_Rep4 1015.5127167003499 1015.51160993586 67.463 2 0.11423450185540167 0.00132054489852655 0.006869851012366977 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 132461 14443 VVDEIFNEY True H1975_Epitope_Rep1 1126.51825557326 1126.51767496793 60.751 1 0.11422814733205246 0.00132054489852655 0.006870844852860452 ['ENSG00000100220|ENST00000216038|RTCB'] 104344 18445 SQISDTSVVL True PC9_epitope_Rep1 1047.5448046742702 1047.54427496793 75.739 1 0.11422745254418723 0.00132054489852655 0.006870953525386459 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 43424 10225 IGGGIDVPVPR True H1975_Epitope_Rep1 1078.61349337078 1078.6123899358602 44.273 2 0.11421994095331921 0.00132054489852655 0.006872128528033906 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 17863 14378 EHVPGADIL True PC9_epitope_Rep2 949.4868958753299 949.48578993586 60.566 2 0.11421890722347441 0.00132054489852655 0.006872290244775693 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 64524 17555 LPRLPVPAV True PC9_epitope_Rep6 960.6120368187999 960.61092993586 80.165 2 0.11421771101282542 0.00132054489852655 0.006872477384632715 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 99016 13671 SHDVVVMTV True PC9_epitope_Rep5 985.49026700361 985.48916993586 57.61 2 0.11421624683221655 0.00132054489852655 0.006872706453488698 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 99245 18368 SHNPLANIL True PC9_epitope_Rep2 977.52942939365 977.52832993586 75.983 2 0.11421563485851334 0.00132054489852655 0.0068728021980513955 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 43846 13352 IHSPVVNEL True PC9_epitope_Rep5 1006.54474510462 1006.54364993586 56.372 2 0.11420831516431375 0.00132054489852655 0.006873947479853857 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 129330 12437 VQYNEPLKV True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 53.145 2 0.11419957477938625 0.00132054489852655 0.006875315293876027 ['ENSG00000148843|ENST00000369797|PDCD11'] 130979 8309 VTDMSDAEQY True H1975_Epitope_Rep2 1157.45466934053 1157.45356993586 36.912 2 0.11419271547414718 0.00132054489852655 0.006876388916069189 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 32758 9096 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.46030993586 40.33 2 0.11418068430528115 0.00132054489852655 0.006878272434280151 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 87423 15690 QPYMPTVSA True PC9_epitope_Rep2 992.4637179025999 992.4631649679301 65.627 1 0.11417883512679809 0.00132054489852655 0.006878561973525248 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 115613 15558 TRVDPLTL True PC9_epitope_Rep3 913.5232813840499 913.52218993586 64.992 2 0.114176801824787 0.00132054489852655 0.006878880355980074 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 10051 13635 AYSRVQYQF True PC9_epitope_Rep1 1160.5614577979202 1160.56036993586 57.303 2 0.1141734222428793 0.00132054489852655 0.006879409575905629 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 34718 5525 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 26.641 2 0.11416623183902976 0.00132054489852655 0.006880535676570248 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 31838 10981 GEISALTAEA True NCI_RA007_Epitope_Rep5 960.47639076128 960.47584496793 48.875 1 0.11415673406895802 0.00132054489852655 0.006882023411847855 ['ENSG00000125968|ENST00000376112|ID1'] 114559 20109 TQDAVPLTL True PC9_epitope_Rep1 956.51786165044 956.51676993586 82.179 2 0.1141548172543111 0.00132054489852655 0.006882323700485786 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 6178 8522 APNLQNQQV True PC9_epitope_Rep4 1010.5145076055 1010.51340993586 40.257 2 0.1141508006553976 0.00132054489852655 0.006882952983077986 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 36936 19460 GVLSDLTKV True PC9_epitope_Rep1 930.53859709502 930.53750993586 79.669 2 0.1141503281050355 0.00132054489852655 0.00688302702145538 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 36265 9893 GVDVTGPHLY True H1975_Epitope_Rep1 1056.52400966004 1056.52290993586 42.987 2 0.11414740007303444 0.00132054489852655 0.0068834857977063835 ['ENSG00000136930|ENST00000259457|PSMB7'] 43534 9090 IGPLGLSPK True H1975_Epitope_Rep3 880.5382031722 880.53710993586 39.952 2 0.11413286514109951 0.00132054489852655 0.006885763630838917 ['ENSG00000197958|ENST00000361436|RPL12'] 39854 8607 HPADSVVSV True PC9_epitope_Rep3 909.4555957470501 909.45448993586 38.055 2 0.11413080231036797 0.00132054489852655 0.006886086965404241 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 107294 16426 SVLDLSHNQL True PC9_epitope_Rep4 1124.58258716532 1124.5814899358602 71.144 2 0.11412828363935336 0.00132054489852655 0.006886481769790211 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 134692 18245 VYTHNLYYL True PC9_epitope_Rep3 1184.5866099165999 1184.58550993586 75.39 2 0.11412246932140356 0.00132054489852655 0.00688739325428372 ['ENSG00000198954|ENST00000361983|KIFBP'] 121176 4741 VESEPAM[Oxidation]TP True H1975_Epitope_Rep3 975.4219130407099 975.42080993586 23.361 2 0.11411554522900211 0.00132054489852655 0.006888478865903228 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000498066.1_1_2:102484451-102486985:+|nuORF'] 120354 8006 VEEFKSIPA True H1975_Epitope_Rep1 1018.5335117145798 1018.53240993586 35.739 2 0.11411386741304909 0.00132054489852655 0.006888741951589357 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 28372 11048 FRVKYETEL True PC9_epitope_Rep6 1183.62372370131 1183.62262993586 53.406 2 0.11411232521306916 0.00132054489852655 0.006888983780958687 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 130976 8291 VTDMSDAEQY True H1975_Epitope_Rep1 1157.45466934053 1157.45356993586 36.823 2 0.1140877744192194 0.00132054489852655 0.006892834653005092 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 48072 22170 IYM[Oxidation]DTLNIF True PC9_epitope_Rep1 1144.547447907 1144.54634993586 90.094 2 0.11408323706269613 0.00132054489852655 0.006893546580901473 ['ENSG00000165678|ENST00000372134|GHITM'] 38853 6404 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 29.609 2 0.1140708576713764 0.00132054489852655 0.006895489315885383 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 89579 6377 QYNPHVHQL True PC9_epitope_Rep3 1134.55704112382 1134.55540490379 29.554 3 0.11406246907193884 0.00132054489852655 0.00689680606599851 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 86296 17940 QISDTSVVL True PC9_epitope_Rep5 960.51277627 960.51166993586 74.023 2 0.11406231547908217 0.00132054489852655 0.0068968301775916676 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 21861 11204 ESDEVELSY True H1975_Epitope_Rep1 1069.44515020265 1069.4440499358602 48.065 2 0.11406183326445353 0.00132054489852655 0.006896905878017182 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 40363 18232 HQSGFFSAL True PC9_epitope_Rep2 992.4715801643599 992.47048993586 75.447 2 0.11406052359368794 0.00132054489852655 0.006897111480649058 ['ENSG00000120029|ENST00000370033|ARMH3'] 130107 6153 VSDPSSPQY True H1975_Epitope_Rep2 978.42944056886 978.4288949679301 28.64 1 0.11405667067401157 0.00132054489852655 0.006897716377410999 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 47821 13686 IYGYVAEQF True NCI_RA007_Epitope_Rep3 1088.5178616504397 1088.51676993586 61.145 2 0.1140562372707662 0.00132054489852655 0.006897784423634516 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 27967 19097 FQGVEFHYV True PC9_epitope_Rep1 1124.5290950404801 1124.5279899358602 78.246 2 0.11405337612473114 0.00132054489852655 0.006898233652546611 ['ENSG00000143815|ENST00000272163|LBR'] 140317 7519 YRDGPGNPL True PC9_epitope_Rep4 987.4773938207899 987.47628993586 36.289 2 0.11404814713952227 0.00132054489852655 0.006899054729572637 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 84894 10753 QEASEAYLV True H1975_Epitope_Rep2 1008.4763907612797 1008.47528993586 46.391 2 0.11404496053371621 0.00132054489852655 0.0068995551502012715 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 96917 12098 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 51.395 2 0.11404067037406128 0.00132054489852655 0.006900228927206403 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 26470 11554 FIDTTSKF True PC9_epitope_Rep4 957.48074786573 957.47964993586 52.203 2 0.11403966527802548 0.00132054489852655 0.0069003867885135016 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 64426 18137 LPNLQTVTV True PC9_epitope_Rep6 983.56514619603 983.56404993586 82.401 2 0.11403781197459442 0.00132054489852655 0.006900677879244777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 27929 21060 FQEEVVAVL True PC9_epitope_Rep5 1032.5491617787197 1032.5480699358602 86.067 2 0.11403779352584117 0.00132054489852655 0.00690068077697432 ['ENSG00000163918|ENST00000296273|RFC4', 'nc|ENSG00000163918|P35249-2|RFC4', 'ENST00000494047.5_1_3:186509405-186522502:-|nuORF'] 89494 18999 QYILFPLRF True NCI_RA007_Epitope_Rep2 1195.67536535135 1195.6742699358601 78.755 2 0.11403774196489419 0.00132054489852655 0.006900688875613462 ['ENSG00000101407|ENST00000373447|TTI1'] 78085 13388 NVVNRLTSV True PC9_epitope_Rep5 1000.56654317836 1000.56544993586 56.513 2 0.11403609508693721 0.00132054489852655 0.006900947554347959 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 32130 6877 GETSVPPPP True H1975_Epitope_Rep2 879.4337976733099 879.43270993586 31.372 2 0.11403070124680355 0.00132054489852655 0.006901794842549145 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 15253 12420 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 52.859 2 0.11402836860754198 0.00132054489852655 0.0069021612950889875 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 32165 13605 GEVLMVQV True NCI_RA007_Epitope_Rep3 873.4629896266098 873.46188993586 60.814 2 0.11400647401037071 0.00132054489852655 0.006905601809201068 ['ENSG00000120948|ENST00000240185|TARDBP'] 91411 15941 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.6067749037902 69.243 3 0.1140017758356187 0.00132054489852655 0.006906340296649314 ['ENSG00000079246|ENST00000392132|XRCC5'] 134622 17772 VYSPHVLNL True PC9_epitope_Rep1 1040.5654805492 1040.5643899358602 73.156 2 0.11399621019722461 0.00132054489852655 0.0069072152364538005 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 77295 11253 NSDNNTIFV True H1975_Epitope_Rep1 1022.46688870674 1022.46578993586 48.26 2 0.11398956729069193 0.00132054489852655 0.006908259667795497 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 16161 8651 EEDIRDLAA True H1975_Epitope_Rep3 1030.4931034545798 1030.49200993586 38.272 2 0.11398058503051414 0.00132054489852655 0.006909672147899605 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 108323 10808 SYITKPEKW True PC9_epitope_Rep5 1150.60225998074 1150.60060490379 46.563 3 0.11397366579926192 0.00132054489852655 0.006910760403304647 ['ENSG00000172469|ENST00000358812|MANEA', 'MANEA|p.K380Sfs*7|1|0.24|ENSG00000172469|chr6:95606151-95606151|G/-|frameshift_variant'] 114524 12214 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.47578496793 52.013 1 0.11397194479296527 0.00132054489852655 0.006911031108688064 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 86078 13787 QHSITPLAL True PC9_epitope_Rep6 978.5498304850599 978.54872993586 64.832 2 0.11396814035291239 0.00132054489852655 0.006911629563941207 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 2489 7469 AEQLTAPPSA True H1975_Epitope_Rep3 983.4923751785899 983.49182496793 33.708 1 0.11395135837740261 0.00132054489852655 0.0069142700432759325 ['ENST00000466510.5_1_22:46711975-46722552:+|nuORF', 'ENST00000479645.1_1_22:46711975-46724816:+|nuORF', 'ENSG00000075218|ENST00000454366|GTSE1'] 20044 13054 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47957496793 55.334 1 0.11395061589346211 0.00132054489852655 0.0069143868884588185 ['ENSG00000182195|ENST00000370526|LDOC1'] 109012 18251 TAIAGLTFL True H1975_Epitope_Rep3 905.52221875489 905.52167496793 76.49 1 0.11394769875422098 0.00132054489852655 0.006914845979123433 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 84849 10478 QEALSALTA True H1975_Epitope_Rep1 902.4709114580199 902.46980993586 45.259 2 0.11394206789474588 0.00132054489852655 0.006915732230644656 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 26433 12667 FIDASRLVY True H1975_Epitope_Rep2 1082.5760452329 1082.57494993586 53.823 2 0.11394164121157094 0.00132054489852655 0.006915799391602005 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 43536 8976 IGPLGLSPK True NCI_RA007_Epitope_Rep5 880.5382031722 880.53710993586 41.184 2 0.11393978825338999 0.00132054489852655 0.006916091059017115 ['ENSG00000197958|ENST00000361436|RPL12'] 105104 5107 SREESAGPAL True PC9_epitope_Rep4 1015.4934378077497 1015.49234993586 26.299 2 0.11393376336311312 0.00132054489852655 0.006917039497624541 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 140299 10678 YRDEADVL True PC9_epitope_Rep1 979.4610750503098 979.45996993586 45.963 2 0.11393171647439744 0.00132054489852655 0.006917361747702093 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 75997 21369 NLVRELLAV True PC9_epitope_Rep3 1025.6233297784897 1025.62222993586 87.494 2 0.11393124602426749 0.00132054489852655 0.006917435814652924 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'PSAT1|p.D68Y|1|0.4|ENSG00000135069|chr9:78304745-78304745|G/T|missense_variant'] 105448 17803 SRVDDVYSVL True PC9_epitope_Rep2 1151.58225281215 1151.5811499358601 73.773 2 0.11392936847381335 0.00132054489852655 0.006917731420998123 ['ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 73598 11154 MVVQDGIVKA True PC9_epitope_Rep4 1058.57941636118 1058.57830993586 50.682 2 0.11392861864783388 0.00132054489852655 0.006917849478943699 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 85862 12152 QHFDSVM[Oxidation]QL True PC9_epitope_Rep5 1119.5018946969099 1119.5007899358602 51.732 2 0.11391661020358708 0.00132054489852655 0.006919740440415806 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 97580 7699 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 34.595 1 0.11391390156864796 0.00132054489852655 0.0069201670366320365 ['nc|ENSG00000128951|P33316-2|DUT'] 41183 21346 HVIDLDDATFL True PC9_epitope_Rep3 1257.62411762413 1257.6230299358601 87.404 2 0.11390770572559857 0.00132054489852655 0.0069211429463450465 ['ENSG00000152219|ENST00000282032|ARL14EP'] 107743 4922 SVSNVVITK True NCI_RA007_Epitope_Rep3 945.54949613189 945.54838993586 26.353 2 0.11389528737912305 0.00132054489852655 0.006923099367211882 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 134194 9358 VYLPTHTSL True NCI_RA007_Epitope_Rep3 1029.54949613189 1029.54838993586 43.901 2 0.11389244365313758 0.00132054489852655 0.00692354745123616 ['ENSG00000007944|ENST00000356840|MYLIP'] 2565 7779 AEQRVPLSV True H1975_Epitope_Rep2 997.5556441414899 997.55454993586 34.868 2 0.11389224887395093 0.00132054489852655 0.006923578143493786 ['ENSG00000125826|ENST00000356286|RBCK1'] 78330 19946 NYISGIQTI True PC9_epitope_Rep3 1007.52876068731 1007.52817496793 81.965 1 0.11388957049178366 0.00132054489852655 0.006924000201955882 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 64757 7155 LQAEIDNIK True H1975_Epitope_Rep1 1042.56587447202 1042.56476993586 32.545 2 0.11388080668720953 0.00132054489852655 0.0069253813735297475 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 114371 19378 TPSIPVLTA True PC9_epitope_Rep4 897.51713337445 897.51658496793 82.647 1 0.11387418971407949 0.00132054489852655 0.006926424382602304 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 104650 14339 SQTDVKTFL True PC9_epitope_Rep5 1037.53932537101 1037.53822993586 60.156 2 0.1138632133842955 0.00132054489852655 0.006928154877174476 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF'] 62726 21619 LLLPDYYLVTV True PC9_epitope_Rep6 1307.73769082439 1307.7365899358601 96.037 2 0.1138605258838452 0.00132054489852655 0.006928578644210855 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 118065 13265 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.5429699358601 59.452 2 0.11384977171700462 0.00132054489852655 0.006930274620834311 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 106019 11574 SSVVTVPSSNF True NCI_RA007_Epitope_Rep3 1122.55570371114 1122.55460993586 52.657 2 0.11384534384299602 0.00132054489852655 0.006930973031973778 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211893|P01859|IGHG2'] 719 10772 AAVGFPTHL True H1975_Epitope_Rep1 911.48650195251 911.48540993586 46.396 2 0.11383432749240127 0.00132054489852655 0.006932710943727321 ['ENSG00000177352|ENST00000321895|CCDC71'] 97582 7898 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 35.353 1 0.11383151951432764 0.00132054489852655 0.006933153990911986 ['nc|ENSG00000128951|P33316-2|DUT'] 128776 18110 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 74.857 2 0.1138250973971898 0.00132054489852655 0.006934167385911476 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 104938 14338 SRDEGSLLL True PC9_epitope_Rep5 988.5189242795999 988.51782993586 60.152 2 0.11380844344510184 0.00132054489852655 0.0069367960101733945 ['nc|ENSG00000132128|Q15345-3|LRRC41', 'ENSG00000132128|ENST00000617190|LRRC41'] 110945 10894 THAAQQILL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 49.669 2 0.11380749132661287 0.00132054489852655 0.006936946319742184 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 87381 7408 QPTSVLDKA True PC9_epitope_Rep5 957.5131106231698 957.51200993586 33.45 2 0.11380655051000065 0.00132054489852655 0.006937094848204565 ['ENSG00000165507|ENST00000298295|DEPP1'] 2519 6326 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.4972449679301 29.326 1 0.11380542194744384 0.00132054489852655 0.006937273020538445 ['ENSG00000146733|ENST00000275605|PSPH'] 103962 19506 SQANRLFYL True PC9_epitope_Rep3 1110.5821932425 1110.58108993586 80.261 2 0.11380515384846986 0.00132054489852655 0.006937315347440314 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 117718 13179 TVVAQLKQL True PC9_epitope_Rep4 998.6124307416198 998.61132993586 58.591 2 0.11380358882603105 0.00132054489852655 0.006937562434891125 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 134789 21202 VYTVVDEMF True PC9_epitope_Rep4 1101.5052483614097 1101.5041499358601 89.718 2 0.11379720730243813 0.00132054489852655 0.006938570045211884 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 4117 19597 AHSNEILIF True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 80.432 2 0.11379602424047257 0.00132054489852655 0.006938756860320097 ['ENSG00000165516|ENST00000298307|KLHDC2', 'KLHDC2|p.R347T|1|0.07|ENSG00000165516|chr14:49782453-49782453|G/C|missense_variant', 'ENST00000554115.5_1_14:50249154-50249313:+|nuORF'] 45683 17596 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6749899358601 72.87 2 0.11379546793925611 0.00132054489852655 0.00693884470649467 ['ENSG00000136628|ENST00000366923|EPRS1'] 105802 6400 SSIQGQWPK True NCI_RA007_Epitope_Rep3 1029.5243440132099 1029.5232499358601 32.179 2 0.11379495886715153 0.00132054489852655 0.006938925095610712 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 104198 18931 SQFQQEFPSL True PC9_epitope_Rep6 1209.5666027480097 1209.56550993586 85.463 2 0.11378972381819628 0.00132054489852655 0.006939751830463076 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 125425 18788 VITETVVEV True PC9_epitope_Rep5 987.5488274255499 987.54772993586 77.282 2 0.113787072561551 0.00132054489852655 0.006940170561436723 ['ENST00000514606.1_1_4:139988805-140005344:-|nuORF', 'nc|ENSG00000109381|Q15723-4|ELF2', 'nc|ENSG00000109381|Q15723-2|ELF2', 'nc|ENSG00000109381|Q15723-3|ELF2', 'nc|ENSG00000109381|Q15723-1|ELF2', 'ENSG00000109381|ENST00000686138|ELF2'] 29397 14544 FVDPNGKISL True PC9_epitope_Rep6 1088.5866099165999 1088.58550993586 67.836 2 0.11378404224402558 0.00132054489852655 0.0069406491900959825 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 62479 21644 LLIENVASL True PC9_epitope_Rep5 970.5698972232999 970.56880993586 88.298 2 0.11377831388260391 0.00132054489852655 0.006941554053396561 ['nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1', 'ENST00000388829.3_1_X:13397321-13397372:-|nuORF', 'ENST00000419783.1_2_3:49395567-49395990:-|nuORF'] 32071 6059 GESDRVFAT True H1975_Epitope_Rep3 980.45632402304 980.45522993586 28.318 2 0.11377607162998354 0.00132054489852655 0.006941908275228449 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 4787 17722 ALDVANKIGII True PC9_epitope_Rep6 1125.6757592741699 1125.67466993586 80.802 2 0.11377475332822092 0.00132054489852655 0.006942116543297779 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 22235 9532 ESYSVYVYK True NCI_RA007_Epitope_Rep1 1136.5389910178399 1136.53847496793 41.073 1 0.11377162856063308 0.00132054489852655 0.0069426102248344905 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 105596 11140 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45877496793 47.817 1 0.11376816177919104 0.00132054489852655 0.0069431579809503315 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 118617 15590 TYSHGNYLF True PC9_epitope_Rep5 1100.49270953176 1100.4916099358602 64.976 2 0.1137680390527949 0.00132054489852655 0.006943177372654005 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 6366 4612 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 24.25 2 0.11375812024095144 0.00132054489852655 0.006944744794113628 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 106038 9676 SSYSGVTQL True H1975_Epitope_Rep2 940.4501760134401 940.44962496793 42.2 1 0.11375719059322725 0.00132054489852655 0.0069448917194068665 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 12039 15141 DHSPDLYSL True PC9_epitope_Rep6 1045.47163973401 1045.4705499358602 70.306 2 0.11375286584961229 0.00132054489852655 0.006945575259065879 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 6338 5790 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 27.088 2 0.11375284405651855 0.00132054489852655 0.006945578703699849 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 96189 10312 RYPDSHQLF True PC9_epitope_Rep4 1161.55670677065 1161.5550749037902 47.352 3 0.11374927418393677 0.00132054489852655 0.006946142983015395 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 118209 19821 TYKNFFYLI True PC9_epitope_Rep6 1207.62774645259 1207.62664993586 88.9 2 0.11373743935739743 0.00132054489852655 0.006948013997629918 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 40153 13525 HQDLSTPVL True PC9_epitope_Rep5 1008.52400966004 1008.52290993586 57.046 2 0.113736897365536 0.00132054489852655 0.006948099694980123 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 17818 19791 EHSTVITFL True PC9_epitope_Rep5 1045.54441075145 1045.5433099358602 81.171 2 0.11373517609210432 0.00132054489852655 0.006948371861904763 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 90340 9079 REFESAIVEA True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56550993586 41.756 2 0.11372571624447714 0.00132054489852655 0.0069498678331132565 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 40528 5420 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 28.757 2 0.11372470286513091 0.00132054489852655 0.00695002810647997 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 72293 11199 MIDPSGVSY True H1975_Epitope_Rep2 967.4320834211501 967.43153496793 48.116 1 0.1137242135223301 0.00132054489852655 0.006950105500912433 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 107226 16287 SVISYLKKL True PC9_epitope_Rep4 1049.6484818971699 1049.64738993586 70.604 2 0.11372273154835714 0.00132054489852655 0.006950339894941973 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000493637.6_1_X:134704384-134704540:+|nuORF', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF', 'ENSG00000165359|ENST00000639893|INTS6L'] 44765 16135 IMDSGELDFY True H1975_Epitope_Rep2 1188.50089125696 1188.49978993586 67.274 2 0.11372223299720101 0.00132054489852655 0.0069504187492078285 ['ENSG00000101216|ENST00000370077|GMEB2'] 994 7118 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 32.311 2 0.11372130047333873 0.00132054489852655 0.006950566245899936 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 1819 7443 AEIAESVQA True H1975_Epitope_Rep3 916.45017601344 916.44906993586 33.607 2 0.11371581380856648 0.00132054489852655 0.006951434129600489 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 111074 10801 THDLEGPPL True PC9_epitope_Rep4 977.4818104948899 977.48070993586 49.305 2 0.11369695995554989 0.00132054489852655 0.006954417244164782 ['ENSG00000169564|ENST00000303577|PCBP1'] 37499 22077 GVVDIFQTV True PC9_epitope_Rep2 976.52294703088 976.52239496793 90.391 1 0.11369519309538592 0.00132054489852655 0.006954696865857929 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 62079 7339 LLDVRDRDSY True H1975_Epitope_Rep3 1250.62551460646 1250.62387490379 33.206 3 0.11367770600617663 0.00132054489852655 0.0069574649451387945 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 18107 10684 EIIDPVLDR True H1975_Epitope_Rep3 1068.5815245361598 1068.5804299358601 46.171 2 0.11367104199626707 0.00132054489852655 0.006958520090814567 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF'] 99258 10526 SHQGDYAVL True PC9_epitope_Rep1 988.4614094034798 988.46030993586 45.378 2 0.113668319065304 0.00132054489852655 0.006958951270632034 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT', 'AASDHPPT|p.Y174Ifs*11|1|0.09|ENSG00000149313|chr11:106090664-106090664|T/-|frameshift_variant'] 1941 10323 AEINATMSV True H1975_Epitope_Rep2 934.4429824580201 934.44188993586 44.716 2 0.1136644090691395 0.00132054489852655 0.00695957046917566 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 21289 12321 ERDYTYEEL True PC9_epitope_Rep4 1216.5247975056798 1216.52370993586 55.203 2 0.11366423267403251 0.00132054489852655 0.006959598404886098 ['ENSG00000125977|ENST00000374980|EIF2S2'] 1177 5913 AEAPSSPDV True H1975_Epitope_Rep2 871.39232678415 871.39177496793 27.731 1 0.11365774375563756 0.00132054489852655 0.006960626131149533 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 138584 19430 YIDIDPLLY True H1975_Epitope_Rep2 1123.58012755383 1123.5795749679298 80.646 1 0.11365431124291171 0.00132054489852655 0.006961169838074899 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 643 17452 AASTLVTWL True H1975_Epitope_Rep3 960.52803241132 960.52748496793 72.828 1 0.11364848304202547 0.00132054489852655 0.006962093114231036 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 21387 12459 ERIGETPEL True PC9_epitope_Rep3 1042.5294889632999 1042.52838993586 52.947 2 0.11364843575700602 0.00132054489852655 0.006962100605387142 ['ENSG00000168806|ENST00000305641|LCMT2'] 132467 14648 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51714993586 61.502 2 0.11364667489167021 0.00132054489852655 0.006962379577048211 ['ENSG00000100220|ENST00000216038|RTCB'] 130531 5864 VSQVGKEL True PC9_epitope_Rep1 858.4810822188998 858.47998993586 27.372 2 0.11364255555270647 0.00132054489852655 0.006963032241058392 ['ENSG00000168209|ENST00000307365|DDIT4'] 109738 4882 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 23.864 2 0.11361779634983937 0.00132054489852655 0.006966956315578117 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 137769 12249 YENSYALAV True H1975_Epitope_Rep2 1028.4814761417197 1028.4803699358602 52.197 2 0.11361556300857724 0.00132054489852655 0.006967310382271981 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'nc|ENSG00000146648|P00533-2|EGFR', 'nc|ENSG00000146648|P00533-4|EGFR', 'nc|ENSG00000146648|P00533-3|EGFR', 'EGFR|p.S752Pfs*3|1|0.48|ENSG00000146648|chr7:55174791-55174813|TCTCCGAAAGCCAACAAGGAAAT/-|frameshift_variant', 'EGFR|p.T751Nfs*15|1|0.5|ENSG00000146648|chr7:55174789-55174789|C/-|frameshift_variant', 'ENSG00000146648|ENST00000275493|EGFR'] 76296 13677 NPNQYNYIA True PC9_epitope_Rep5 1095.49852318819 1095.49742993586 57.633 2 0.11361125357263824 0.00132054489852655 0.006967993635639699 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 9684 10651 AYGFVARI True NCI_RA007_Epitope_Rep3 895.4915873329498 895.49048993586 48.943 2 0.11360751480169304 0.00132054489852655 0.006968586463756524 ['ENSG00000110799|ENST00000261405|VWF', 'VWF|p.N911Ifs*9|1|0.28|ENSG00000110799|chr12:6031534-6031534|C/-|frameshift_variant', 'ENST00000321023.5_1_12:6204574-6232125:-|nuORF', 'nc|ENSG00000110799|P04275-2|VWF'] 38040 11450 HASDRIIAL True PC9_epitope_Rep1 994.5559784946599 994.55488993586 48.92 2 0.11360273507723154 0.00132054489852655 0.006969344419123511 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 9721 21941 AYGNVFSAF True PC9_epitope_Rep1 974.4497820906199 974.44923496793 89.214 1 0.11359670848203747 0.00132054489852655 0.006970300213775178 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 35021 7833 GQVALRTSL True NCI_RA007_Epitope_Rep5 943.54507945779 943.5439899358599 36.828 2 0.11359595952790864 0.00132054489852655 0.006970419003882534 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 141364 14116 YTEALNIADY True H1975_Epitope_Rep2 1171.5397192938299 1171.5386299358602 59.452 2 0.11359251823341511 0.00132054489852655 0.006970964845923778 ['ENSG00000122299|ENST00000355758|ZC3H7A', 'ENST00000575170.1_1_16:11869425-11876228:-|nuORF'] 28467 12868 FSDPVYAEAY True H1975_Epitope_Rep1 1160.5026055091198 1160.50207496793 54.565 1 0.11358634181095688 0.00132054489852655 0.006971944625182623 ['ENSG00000129083|ENST00000439561|COPB1'] 3997 18348 AHEGSIFAL True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 75.364 2 0.11357150117563351 0.00132054489852655 0.006974299373484859 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 88890 20162 QVEEELFSV True PC9_epitope_Rep4 1078.51825557326 1078.51714993586 85.691 2 0.11356997743682887 0.00132054489852655 0.006974541187222423 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 20737 7514 EQEVNILK True NCI_RA007_Epitope_Rep1 971.5287606873098 971.52766993586 33.22 2 0.11356980061944946 0.00132054489852655 0.006974569248248237 ['ENSG00000100345|ENST00000216181|MYH9'] 87367 19774 QPSSLLPLA True PC9_epitope_Rep4 924.5280324113199 924.52748496793 84.186 1 0.11356935908488222 0.00132054489852655 0.006974639320531277 ['ENSG00000117984|ENST00000236671|CTSD'] 125424 17812 VITETVVEV True PC9_epitope_Rep4 987.5488274255499 987.54772993586 76.546 2 0.11356820324083272 0.00132054489852655 0.006974822758172176 ['ENST00000514606.1_1_4:139988805-140005344:-|nuORF', 'nc|ENSG00000109381|Q15723-4|ELF2', 'nc|ENSG00000109381|Q15723-2|ELF2', 'nc|ENSG00000109381|Q15723-3|ELF2', 'nc|ENSG00000109381|Q15723-1|ELF2', 'ENSG00000109381|ENST00000686138|ELF2'] 398 5091 AALEDKNSL True NCI_RA007_Epitope_Rep3 959.49237517859 959.49126993586 27.017 2 0.11356739986635271 0.00132054489852655 0.006974950260066864 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1'] 21219 7834 ERDPHEEIL True PC9_epitope_Rep1 1136.5462016566 1136.5445549037902 34.96 3 0.11356670017871771 0.00132054489852655 0.006975061307880096 ['ENSG00000153140|ENST00000283122|CETN3'] 45530 4417 IQQNTFTR True NCI_RA007_Epitope_Rep5 1006.51959298594 1006.51848993586 23.621 2 0.11355773397621625 0.00132054489852655 0.00697648449068971 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 31776 7016 GEIASFDKA True NCI_RA007_Epitope_Rep4 936.4552613938799 936.45416993586 33.615 2 0.11354667994046275 0.00132054489852655 0.006978239457784863 ['ENSG00000034510|ENST00000233143|TMSB10'] 96399 7092 SAAAALVLK True NCI_RA007_Epitope_Rep3 842.52255310806 842.52144993586 35.011 2 0.11354496645496805 0.00132054489852655 0.006978511533478267 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 42494 15119 IEEIEGLISA True H1975_Epitope_Rep3 1072.56520576568 1072.5641099358602 63.554 2 0.11354232923460685 0.00132054489852655 0.006978930304466944 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 64093 22390 LPDIFEAQIA True PC9_epitope_Rep1 1115.58627556343 1115.5851699358602 90.941 2 0.11352463590001732 0.00132054489852655 0.006981740504994254 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 116288 13116 TTDLFGRDLSY True H1975_Epitope_Rep3 1286.6142812164198 1286.6131899358602 55.696 2 0.11352130754504741 0.00132054489852655 0.006982269264292948 ['ENSG00000169813|ENST00000682386|HNRNPF'] 85838 6224 QHEGGVQEL True PC9_epitope_Rep3 995.46722305991 995.46612993586 28.979 2 0.11351683133898524 0.00132054489852655 0.006982980438275328 ['ENSG00000090273|ENST00000321265|NUDC'] 7217 19064 ARDDFAYCL True PC9_epitope_Rep5 1072.46478053176 1072.4636899358602 78.359 2 0.11351513927658306 0.00132054489852655 0.00698324928932087 ['ENSG00000115641|ENST00000530340|FHL2'] 97130 16382 SDLRMLDSL True PC9_epitope_Rep6 1048.52229540788 1048.52118993586 75.401 2 0.11350783094886772 0.00132054489852655 0.006984410621628642 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 73099 19693 M[Oxidation]RFLAATFL True PC9_epitope_Rep4 1084.57393743836 1084.57282993586 83.87 2 0.11350570639507683 0.00132054489852655 0.006984748259721223 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 62958 15641 LLPGKTYSF True PC9_epitope_Rep5 1024.5593325395998 1024.55822993586 65.175 2 0.11349512723499457 0.00132054489852655 0.006986429755517519 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 132704 11899 VVHDGFEGL True PC9_epitope_Rep6 971.47124581119 971.47014993586 57.003 2 0.11348810096277429 0.00132054489852655 0.006987546757517462 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 21236 13671 ERDPSPWAV True PC9_epitope_Rep2 1055.50360856863 1055.5025099358602 57.876 2 0.11348101596103684 0.00132054489852655 0.0069886732714674734 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 14527 12809 DTNADKQLSF True PC9_epitope_Rep3 1137.53021723929 1137.52912993586 54.291 2 0.1134808226775512 0.00132054489852655 0.006988704005974075 ['ENSG00000163220|ENST00000368738|S100A9'] 77897 21562 NVIDYIDTI True PC9_epitope_Rep4 1064.53899101784 1064.5378899358602 91.118 2 0.11347522110864249 0.00132054489852655 0.006989594782888851 ['ENSG00000156017|ENST00000376834|CARNMT1'] 44123 12763 IIQLLDDYPK True H1975_Epitope_Rep3 1216.67033954056 1216.66924993586 54.307 2 0.11347461887773196 0.00132054489852655 0.006989690557863699 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000448115.1_1_1:220490746-220490923:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 14132 8714 DSDFRKDDFY True H1975_Epitope_Rep2 1306.5465955794198 1306.54495490379 38.479 3 0.11347282760203858 0.00132054489852655 0.006989975438485329 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 88019 13986 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 58.635 2 0.1134719055139596 0.00132054489852655 0.006990122089775305 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 6799 10801 AQEPGNYEV True PC9_epitope_Rep1 1005.4403396057298 1005.43924993586 46.433 2 0.11347051785516947 0.00132054489852655 0.006990342792269514 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 6913 12371 AQIGSYVHV True PC9_epitope_Rep4 972.50288029264 972.50178993586 55.392 2 0.11347048933527172 0.00132054489852655 0.006990347328334855 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 121834 10201 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 47.209 2 0.11346889426101082 0.00132054489852655 0.006990601028077198 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 68619 22672 LTIDDGIFEV True PC9_epitope_Rep2 1120.56520576568 1120.5641099358602 92.703 2 0.11346014814142935 0.00132054489852655 0.006991992274604462 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 85326 10747 QESIPDIQA True H1975_Epitope_Rep2 999.4872897981498 999.48618993586 46.366 2 0.1134584182379147 0.00132054489852655 0.006992267482425075 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 86050 8769 QHQSGIVQL True PC9_epitope_Rep6 1008.5352430500798 1008.53414993586 43.628 2 0.113453399090439 0.00132054489852655 0.006993066030731147 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 12668 17756 DLDLSPLEY True H1975_Epitope_Rep3 1063.50735653639 1063.50677496793 74.256 1 0.11345305764557442 0.00132054489852655 0.0069931203579549454 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 66044 11756 LSEGVTISY True H1975_Epitope_Rep2 967.4862271689901 967.4856749679301 50.295 1 0.11344235838496079 0.00132054489852655 0.00699482292259006 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 93481 6927 RQINVGNAL True NCI_RA007_Epitope_Rep3 983.5512274673898 983.55012993586 34.352 2 0.11343580276914071 0.00132054489852655 0.006995866311053949 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 29366 10123 FVDKNNDLLY True H1975_Epitope_Rep1 1239.61355294043 1239.61244993586 43.874 2 0.11342850968868722 0.00132054489852655 0.006997027251415417 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 121842 16042 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 66.52 2 0.11342456102617701 0.00132054489852655 0.006997655892552569 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 40980 11153 HTDSLHLLI True H1975_Epitope_Rep2 1047.57129420563 1047.57018993586 47.937 2 0.11341697742449389 0.00132054489852655 0.006998863382606689 ['ENSG00000139645|ENST00000267116|ANKRD52'] 34795 14600 GQGQIYVHL True PC9_epitope_Rep5 1013.5294293936499 1013.52832993586 61.16 2 0.11341069538687402 0.00132054489852655 0.006999863785707757 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 104226 15087 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.56018496793 63.289 1 0.11340823158401718 0.00132054489852655 0.007000256179712361 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 109156 20728 TAMDVVYAL True PC9_epitope_Rep4 981.4841189940099 981.48302993586 87.895 2 0.11339830026944071 0.00132054489852655 0.007001838092541897 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 43910 7601 IIALDGDTK True NCI_RA007_Epitope_Rep1 944.51786165044 944.51676993586 33.559 2 0.11339829052180461 0.00132054489852655 0.00700183964536776 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 65303 15780 LRAPPTLL True PC9_epitope_Rep5 879.55418758951 879.55308993586 65.691 2 0.11339344948534898 0.00132054489852655 0.0070026108773792 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.S502R|1|0.16|ENSG00000183963|chr22:31091721-31091721|T/A|missense_variant', 'nc|ENSG00000183963|P53814-2|SMTN'] 28206 13845 FREGESVTVL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 58.537 2 0.11339313968310108 0.00132054489852655 0.0070026602351960735 ['ENSG00000104881|ENST00000360957|PPP1R13L', 'PPP1R13L|p.S778C|1|0.29|ENSG00000104881|chr19:45382642-45382642|G/C|missense_variant'] 107204 13328 SVIPQIQKV True PC9_epitope_Rep4 1010.6124307416198 1010.61132993586 59.168 2 0.11339002051788827 0.00132054489852655 0.007003157200636516 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 92783 19641 RPAGALVALVV True PC9_epitope_Rep2 1064.67061432408 1064.66950993586 80.934 2 0.11338390254277318 0.00132054489852655 0.007004132055093125 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 86339 9829 QIYGVFDEK True NCI_RA007_Epitope_Rep4 1097.53932537101 1097.53822993586 44.656 2 0.11337547460883542 0.00132054489852655 0.007005475200103126 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'nc|ENSG00000150712|Q9C0I1-3|MTMR12', 'MTMR12-ZFR|2|fusion'] 110361 8001 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 35.725 2 0.11337293356548303 0.00132054489852655 0.00700588021072897 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 53674 7880 KSDTQNLLY True H1975_Epitope_Rep2 1080.54513902744 1080.5440499358601 35.256 2 0.11336965497773767 0.00132054489852655 0.0070064028102912795 ['ENSG00000012232|ENST00000220562|EXTL3'] 11800 6044 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 28.64 2 0.11336696786138638 0.00132054489852655 0.007006831158829621 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 112190 19820 TKFGGIVVL True PC9_epitope_Rep5 932.5695033004798 932.56840993586 81.285 2 0.1133539792801971 0.00132054489852655 0.007008902004091008 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 24684 18731 FALPGLLHA True PC9_epitope_Rep6 937.5385375253701 937.53798496793 84.69 1 0.11335326928925754 0.00132054489852655 0.007009015219198059 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 92847 19231 RPDSFVLIL True PC9_epitope_Rep6 1058.61243074162 1058.61132993586 86.624 2 0.1133429410989372 0.00132054489852655 0.007010662352320488 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 18439 19822 EIYKEFFEV True PC9_epitope_Rep4 1202.58594121026 1202.5848499358601 84.374 2 0.11334111416493085 0.00132054489852655 0.007010953749652675 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 110184 10972 TEQDPYNNIV True H1975_Epitope_Rep2 1191.5407819229902 1191.53968993586 47.234 2 0.11333883802447099 0.00132054489852655 0.007011316812183772 ['ENSG00000146085|ENST00000274813|MMUT', 'MUT|p.R369P|1|0.67|ENSG00000146085|chr6:49451692-49451692|C/G|missense_variant'] 75019 13215 NHSDYNMVL True PC9_epitope_Rep2 1091.47059418819 1091.46948993586 56.109 2 0.11333470120714481 0.00132054489852655 0.007011976714184258 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 95560 19339 RWSPVRPLVF True PC9_epitope_Rep2 1255.71896149883 1255.71786993586 79.761 2 0.11333412818118802 0.00132054489852655 0.007012068127605672 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 97522 8874 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42816496793 39.047 1 0.11333336752629337 0.00132054489852655 0.007012189474795598 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 128552 13910 VPTANVSVVDL True H1975_Epitope_Rep1 1112.607739284 1112.60664993586 58.658 2 0.11333245590820741 0.00132054489852655 0.007012334907809767 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF'] 115820 8534 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41782993586 37.781 2 0.11332852333590913 0.00132054489852655 0.007012962315734186 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 35774 15708 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.5172549679301 65.244 1 0.11332176033861888 0.00132054489852655 0.007014041420837676 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 105777 9922 SSHFLEQTL True NCI_RA007_Epitope_Rep5 1060.5189242796 1060.5178299358602 44.807 2 0.11332052474344542 0.00132054489852655 0.007014238590031868 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 76332 19494 NPTLILAA True PC9_epitope_Rep3 811.4803539429099 811.47980496793 80.215 1 0.11331803283859095 0.00132054489852655 0.0070146362502761204 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 99840 18718 SILFVPTSAPR True PC9_epitope_Rep3 1186.6710082468999 1186.66990993586 77.224 2 0.11331009980292861 0.00132054489852655 0.007015902356305409 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 118572 19315 TYQTIIELF True NCI_RA007_Epitope_Rep3 1126.5910265906998 1126.58992993586 84.325 2 0.11330771205558839 0.00132054489852655 0.0070162834822303476 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47492766-47503942:+|nuORF'] 134795 13353 VYTVVDEM[Oxidation]F True NCI_RA007_Epitope_Rep4 1117.50016336141 1117.49957496793 58.515 1 0.11329751833040623 0.00132054489852655 0.007017910803594768 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 105849 11068 SSLPTQLFK True NCI_RA007_Epitope_Rep5 1019.5651461960299 1019.56404993586 49.207 2 0.11329489342523318 0.00132054489852655 0.007018329901453241 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 138403 5253 YHGNTNPEL True PC9_epitope_Rep4 1043.46722305991 1043.4661299358602 26.905 2 0.113284727576962 0.00132054489852655 0.0070199532311419 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 8379 6398 ATLNSIVAK True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 32.171 2 0.11328358529443433 0.00132054489852655 0.007020135658858042 ['ENSG00000007944|ENST00000356840|MYLIP'] 6370 5444 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 27.678 2 0.11328205736616427 0.00132054489852655 0.0070203796831420735 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 97956 10617 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.4652749679301 45.909 1 0.11328147908384896 0.00132054489852655 0.00702047204232522 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 28081 12162 FQTHTTPVL True PC9_epitope_Rep3 1042.54474510462 1042.54364993586 51.818 2 0.11327434696436935 0.00132054489852655 0.007021611231172476 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 55226 8670 LADDSVRSL True PC9_epitope_Rep6 974.50327421546 974.50216993586 43.193 2 0.11327167914684809 0.00132054489852655 0.007022037398535904 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 62970 12280 LLPHVVPGTT True PC9_epitope_Rep6 1032.59678067748 1032.59568993586 58.621 2 0.11327061300391641 0.00132054489852655 0.0070222077152967775 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 98032 5002 SEQHIPVSA True NCI_RA007_Epitope_Rep3 966.4770594676199 966.47596993586 26.672 2 0.1132696681294974 0.00132054489852655 0.00702235866271292 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 6362 7465 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 33.718 2 0.1132684849231521 0.00132054489852655 0.007022547689032238 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 106952 6625 SVEAAAELSAK True NCI_RA007_Epitope_Rep1 1074.55570371114 1074.55460993586 29.783 2 0.11326751660422295 0.00132054489852655 0.007022702389104926 ['ENSG00000159335|ENST00000309083|PTMS'] 32754 9919 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.46030993586 43.013 2 0.1132654367962801 0.00132054489852655 0.007023034673489448 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 103236 9322 SPLFSQHTA True PC9_epitope_Rep3 986.48214484806 986.48104993586 40.798 2 0.11324569364083634 0.00132054489852655 0.007026189734941101 ['ENSG00000167721|ENST00000301364|TSR1'] 96719 20317 SALPFITYL True H1975_Epitope_Rep1 1023.5640835668698 1023.5635749679301 84.504 1 0.11323021984004787 0.00132054489852655 0.007028663491617429 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 48989 7809 KEFIKIVEA True NCI_RA007_Epitope_Rep3 1075.62774645259 1075.62664993586 37.837 2 0.11322699227525183 0.00132054489852655 0.007029179580543707 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 74824 8172 NHDYSYTV True PC9_epitope_Rep2 997.4141248578901 997.41302993586 36.789 2 0.1132267963389665 0.00132054489852655 0.00702921091201879 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 137415 8102 YEAQDPEIA True H1975_Epitope_Rep2 1034.4556553166997 1034.45454993586 36.113 2 0.11321985291380512 0.00132054489852655 0.007030321297907249 ['ENSG00000111678|ENST00000229281|C12orf57'] 9246 17847 AVPEIMDRI True PC9_epitope_Rep2 1042.5481162329 1042.5470099358602 73.949 2 0.11321717845085856 0.00132054489852655 0.007030749040833705 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 125053 14480 VIDQKVYEI True PC9_epitope_Rep5 1105.60192562757 1105.60082993586 60.699 2 0.11321399847722644 0.00132054489852655 0.0070312576659669794 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF'] 114084 4684 TPFQGQGHGA True PC9_epitope_Rep3 998.4569927293797 998.45588993586 23.111 2 0.11321063320221306 0.00132054489852655 0.007031795968241279 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 87986 13969 QRNEVVVEL True PC9_epitope_Rep3 1084.58767254576 1084.58656993586 58.806 2 0.11320362187104084 0.00132054489852655 0.007032917614327592 ['ENSG00000186432|ENST00000334256|KPNA4'] 1632 10009 AEFQVKITA True H1975_Epitope_Rep2 1005.5494961318899 1005.54838993586 43.489 2 0.11319935010242572 0.00132054489852655 0.007033601080677439 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 31581 12882 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47456993586 54.662 2 0.11318833565465752 0.00132054489852655 0.007035363646619062 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 85371 5479 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.44940993586 26.09 2 0.11318218456014034 0.00132054489852655 0.007036348150146214 ['ENSG00000196878|ENST00000356082|LAMB3'] 75778 14716 NLLSVAYK True PC9_epitope_Rep3 906.5174677276199 906.51636993586 61.745 2 0.11317314208978008 0.0013533678037269668 0.0070377956707467545 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 25683 5418 FEQGGARVV True H1975_Epitope_Rep3 961.4981292653698 961.49702993586 25.902 2 0.1131727755926639 0.0013533678037269668 0.007037854345772969 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 8169 12195 ATESVSLYY True H1975_Epitope_Rep2 1031.48114178855 1031.48057496793 51.991 1 0.113170845447905 0.0013533678037269668 0.007038163363656797 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 4101 12728 AHSDAQALVL True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 53.832 2 0.11316905340374105 0.0013533678037269668 0.007038450283292673 ['ENSG00000196305|ENST00000443024|IARS1'] 138520 7530 YHTDTTVKF True PC9_epitope_Rep4 1110.53457434374 1110.53346993586 36.332 2 0.11316685556419599 0.0013533678037269668 0.0070388021892820365 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant'] 76046 9111 NM[Oxidation]DNM[Oxidation]FESY True H1975_Epitope_Rep3 1181.40052635357 1181.39942993586 40.035 2 0.11316397019302374 0.0013533678037269668 0.007039264204960538 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 101359 20940 SLITRLLEV True PC9_epitope_Rep4 1042.63864548946 1042.63754993586 88.705 2 0.11315473446344483 0.0013533678037269668 0.007040743259868257 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 69641 18859 LVDQNIFSFY True H1975_Epitope_Rep3 1244.607739284 1244.60664993586 79.101 2 0.11315311405673929 0.0013533678037269668 0.007041002790797841 ['ENSG00000117984|ENST00000236671|CTSD'] 109810 8510 TEEENYNVV True H1975_Epitope_Rep2 1095.47203365683 1095.47092993586 37.689 2 0.11315251585687533 0.0013533678037269668 0.00704109860326601 ['ENSG00000184178|ENST00000401642|SCFD2', 'nc|ENSG00000184178|Q8WU76-2|SCFD2'] 131023 4799 VTDRDIDRY True H1975_Epitope_Rep3 1151.55710069347 1151.55544490379 23.587 3 0.11314145594905294 0.0013533678037269668 0.007042870274240254 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 71662 17202 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50939496793 71.459 1 0.11313292937142343 0.0013533678037269668 0.007044236429734089 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 10100 16265 AYTPFHAVL True PC9_epitope_Rep6 1017.5283667644899 1017.52726993586 74.928 2 0.11312935755782254 0.0013533678037269668 0.007044808793483274 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 71878 16140 MENEFLLPP True H1975_Epitope_Rep2 1088.5212327787199 1088.52012993586 67.295 2 0.11312832578656887 0.0013533678037269668 0.007044974137623334 ['ENSG00000121741|ENST00000610343|ZMYM2'] 35627 13064 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56537496793 55.373 1 0.11312038499557506 0.0013533678037269668 0.007046246796841816 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 43804 17575 IHSDVVFVV True PC9_epitope_Rep4 1013.55458151233 1013.55348993586 75.619 2 0.11311993314179938 0.0013533678037269668 0.007046319221503846 ['ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF', 'ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1'] 9555 10382 AWAPKPYHKF True PC9_epitope_Rep3 1243.6502132326698 1243.64857490379 44.877 3 0.11311947067700494 0.0013533678037269668 0.007046393347683588 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 103889 16819 SQADVIPAV True PC9_epitope_Rep2 898.4759968384599 898.47488993586 69.943 2 0.11311820774614532 0.0013533678037269668 0.007046595780436355 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 85452 15273 QEYVTFLGA True H1975_Epitope_Rep2 1026.5022115862998 1026.5016749679298 63.905 1 0.11310650328290453 0.0013533678037269668 0.007048472134621656 ['ENSG00000197956|ENST00000368719|S100A6'] 34726 6543 GQEDHYNNL True PC9_epitope_Rep5 1088.45230127176 1088.45120993586 30.141 2 0.11308740436561728 0.0013533678037269668 0.007051534941460935 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 113991 9888 TPALIALR True H1975_Epitope_Rep3 853.53853752537 853.53744993586 43.065 2 0.11308379088810526 0.0013533678037269668 0.007052114563643245 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 49582 6725 KFVETHPEF True NCI_RA007_Epitope_Rep3 1132.5553097883198 1132.5542099358602 33.541 2 0.1130810168792251 0.0013533678037269668 0.007052559561666375 ['ENSG00000093072|ENST00000399837|ADA2', 'nc|ENSG00000093072|Q9NZK5-2|ADA2'] 38360 8770 HEIKSELL True PC9_epitope_Rep4 967.5338460677499 967.53274993586 41.243 2 0.11307930657024846 0.0013533678037269668 0.007052833937772005 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 108891 10300 TAAPPAQPL True PC9_epitope_Rep1 864.4705175352 864.46942993586 44.503 2 0.11307167405162415 0.0013533678037269668 0.007054058509795281 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 1907 8150 AEIIITKTP True H1975_Epitope_Rep2 984.58554728744 984.58444993586 36.299 2 0.11306257183920806 0.0013533678037269668 0.007055519151099297 ['nc|ENSG00000174306|Q9H4I2-2|ZHX3', 'ENSG00000174306|ENST00000683867|ZHX3', 'ZHX3|p.L395Tfs*66|1|0.38|ENSG00000174306|chr20:41203735-41203736|-/G|frameshift_variant'] 111206 12367 THISDTSVVL True PC9_epitope_Rep4 1070.56078909158 1070.5596899358602 55.376 2 0.11306182017764098 0.0013533678037269668 0.007055639784105253 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 95401 13018 RWFDKSFTF True NCI_RA007_Epitope_Rep3 1232.59784330664 1232.5961849037901 58.478 3 0.11304998488135001 0.0013533678037269668 0.007057539476237649 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 34576 12616 GPSVFLFPPK True NCI_RA007_Epitope_Rep5 1087.6066170851898 1087.6055299358602 55.18 2 0.1130470787419923 0.0013533678037269668 0.007058006018644617 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 8495 4565 ATSAPLVSR True NCI_RA007_Epitope_Rep4 900.50288029264 900.50178993586 23.961 2 0.11304238998713405 0.0013533678037269668 0.007058758799543408 ['ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'ENST00000497509.1_1_22:46926386-46930076:-|nuORF', 'ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 105558 5372 SSDDSKLEY True H1975_Epitope_Rep1 1042.44548455582 1042.44438993586 25.721 2 0.11304159534866239 0.0013533678037269668 0.007058886386686168 ['ENSG00000114331|ENST00000326793|ACAP2'] 109774 10159 TEDWDQPVA True H1975_Epitope_Rep1 1059.45090428943 1059.44980993586 44.015 2 0.11304057144764053 0.0013533678037269668 0.007059050787517912 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 2441 11817 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.50618993586 50.53 2 0.11303976064374326 0.0013533678037269668 0.007059180975425898 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 12050 6721 DHSQAVTL True PC9_epitope_Rep6 869.42429561877 869.42318993586 34.632 2 0.11303801909691366 0.0013533678037269668 0.007059460617298367 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 7104 17047 AQVALVNEV True PC9_epitope_Rep1 941.51819600361 941.51708993586 70.397 2 0.11303766187787163 0.0013533678037269668 0.007059517977635786 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 72274 21153 MHYPTALLF True PC9_epitope_Rep1 1091.54738795691 1091.5462899358602 86.197 2 0.1130288507166364 0.0013533678037269668 0.007060932970187654 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 24525 21539 FAFQAEIAQL True PC9_epitope_Rep4 1136.5866099165999 1136.58550993586 91.028 2 0.11300294267316517 0.0013533678037269668 0.007065095160175727 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'HSP90AA1|p.T19S|1|0.38|ENSG00000080824|chr14:102086324-102086324|T/A|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 88684 5086 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 24.645 2 0.11298574350975477 0.0013533678037269668 0.007067859561164145 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 137872 11075 YETLTITQA True H1975_Epitope_Rep1 1038.5233409536997 1038.52277496793 47.563 1 0.11297308985134687 0.0013533678037269668 0.007069894038143556 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 116297 10647 TTDPYLTNSY True H1975_Epitope_Rep2 1173.5189838492502 1173.51788993586 45.977 2 0.11296539865570528 0.0013533678037269668 0.0070711309192516125 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 58382 9093 LENLVNQAA True H1975_Epitope_Rep2 970.5083595959 970.50726993586 39.927 2 0.11295735305667423 0.0013533678037269668 0.007072425019258058 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 97274 9052 SEAFSVASA True H1975_Epitope_Rep1 867.3974121645899 867.39686496793 39.727 1 0.11295142515569206 0.0013533678037269668 0.007073378643554371 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 9811 11594 AYLEAHETF True PC9_epitope_Rep6 1079.4923751785898 1079.4912699358601 55.712 2 0.11295093429529376 0.0013533678037269668 0.007073457614092603 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 97972 7221 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 32.709 1 0.11294798115688476 0.0013854733123203214 0.007073932738560482 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 128948 21005 VQIGDIVTV True PC9_epitope_Rep5 942.5385970950199 942.53750993586 85.855 2 0.11294766539235503 0.0013854733123203214 0.007073983543108314 ['ENSG00000142534|ENST00000270625|RPS11'] 25370 9060 FEADPPGQVAA True H1975_Epitope_Rep3 1100.51383889916 1100.5132749679299 39.834 1 0.11294761311759656 0.0013854733123203214 0.007073991953825776 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 124770 15813 VHDEGVWAL True PC9_epitope_Rep6 1024.4977949121999 1024.49668993586 73.087 2 0.11294627296635595 0.0013854733123203214 0.0070742075800060335 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 87158 17236 QPFGDHIISV True PC9_epitope_Rep4 1111.56620882519 1111.5651099358602 74.307 2 0.11294165199914108 0.0013854733123203214 0.007074951128175212 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 25681 5366 FEQGGARVV True H1975_Epitope_Rep2 961.4981292653698 961.49702993586 25.682 2 0.11294089231134406 0.0013854733123203214 0.007075073374872922 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 54855 21849 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61157496793 88.852 1 0.11293968496980779 0.0013854733123203214 0.007075267660890679 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 31334 12729 GDLPFVVPR True NCI_RA007_Epitope_Rep1 998.5549158654999 998.55380993586 53.498 2 0.11293643121071514 0.0013854733123203214 0.007075791283223235 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 95698 21020 RYFLPPYTF True PC9_epitope_Rep2 1202.6124307416196 1202.61132993586 86.306 2 0.11293260149398447 0.0013854733123203214 0.007076407641647833 ['ENSG00000023608|ENST00000216294|SNAPC1'] 38320 9428 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.45990993586 41.232 2 0.1129265464379419 0.0013854733123203214 0.007077382254609715 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 34901 12725 GQMDPSAQI True PC9_epitope_Rep5 945.4225813666098 945.42148993586 53.954 2 0.11292629321450073 0.0013854733123203214 0.007077423015919203 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000493446.1_1_7:1510215-1510538:-|nuORF'] 45124 15567 IPLYLKGGVA True PC9_epitope_Rep2 1029.6222671493297 1029.62116993586 65.152 2 0.1129167139896418 0.0013854733123203214 0.007078965148348778 ['ENSG00000112695|ENST00000684430|COX7A2'] 103688 5597 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 26.916 2 0.11290943175122843 0.0013854733123203214 0.007080137713360043 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 111067 15589 THDITTISI True PC9_epitope_Rep5 999.52367530687 999.52256993586 64.972 2 0.11290631369947572 0.0013854733123203214 0.007080639830624967 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 3096 11452 AGAEGFVRV True PC9_epitope_Rep2 904.4766655447999 904.47556993586 49.369 2 0.11290307775674538 0.0013854733123203214 0.007081160969037465 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 64730 15579 LPWQGLKAA True PC9_epitope_Rep2 982.5600012459398 982.55890993586 65.199 2 0.11289629120152013 0.0013854733123203214 0.007082254043215332 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 69 12683 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44850496793 53.995 1 0.11288395140347944 0.0013854733123203214 0.007084241967673851 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 30595 19257 GAIPRLVQL True PC9_epitope_Rep5 965.6022004110898 965.60110993586 79.113 2 0.11288392843115296 0.0013854733123203214 0.007084245668988412 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 42987 5698 IESSSPEV True H1975_Epitope_Rep2 846.39707781142 846.3965249679301 26.914 1 0.11287376491731313 0.0013854733123203214 0.007085883404143639 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 33900 9958 GLQFPVGR True NCI_RA007_Epitope_Rep1 872.4868363056798 872.48572993586 42.738 2 0.1128711064515192 0.0013854733123203214 0.00708631184635693 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 12712 7081 DLEAHIDSANK True PC9_epitope_Rep5 1211.57823006087 1211.57659490379 32.204 3 0.11286679918246818 0.0013854733123203214 0.0070870060654096975 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 18413 19070 EIVTTIPTI True PC9_epitope_Rep6 985.56956287013 985.56846993586 85.996 2 0.1128646437534978 0.0013854733123203214 0.007087353488905322 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 129089 9307 VQPSKYHFL True PC9_epitope_Rep6 1117.5920296502102 1117.59092993586 45.965 2 0.112857767121341 0.0013854733123203214 0.007088462011391616 ['ENSG00000177383|ENST00000317897|MAGEF1'] 68074 12951 LTDLVPNTEY True H1975_Epitope_Rep1 1163.57101942211 1163.5704749679298 54.892 1 0.1128567048491357 0.0013854733123203214 0.00708863326610777 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 7105 16625 AQVALVNEV True PC9_epitope_Rep2 941.51819600361 941.51708993586 69.193 2 0.11285518951681443 0.0013854733123203214 0.007088877568066769 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 21932 11598 ESDVGVVVY True H1975_Epitope_Rep3 965.47057710485 965.47002496793 49.743 1 0.1128453719286282 0.0013854733123203214 0.007090460557925866 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 1417 8288 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 36.831 2 0.11284421994570872 0.0013854733123203214 0.007090646326342183 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 78558 14680 NYQGHFHLF True PC9_epitope_Rep4 1161.5355774032498 1161.53392490379 64.402 3 0.11284285831980383 0.0013854733123203214 0.007090865907807182 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 93524 12051 RQLEDTVAL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 54.159 2 0.11283850656662263 0.0013854733123203214 0.007091567733853415 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 126042 5828 VLEDSDLK True NCI_RA007_Epitope_Rep2 917.4705771048499 917.46948993586 27.288 2 0.11283808931745362 0.0013854733123203214 0.007091635028968218 ['ENSG00000044574|ENST00000324460|HSPA5'] 77539 10930 NTDLGNDLY True H1975_Epitope_Rep1 1023.4509042894299 1023.4498099358599 47.005 2 0.11283627634627275 0.0013854733123203214 0.00709192743722772 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 107841 17904 SVVELVNKL True PC9_epitope_Rep4 999.5964463243099 999.59534993586 76.909 2 0.11283625412752582 0.0013854733123203214 0.0070919310208900676 ['ENSG00000128335|ENST00000358502|APOL2'] 18466 12951 EKDFYLYY True H1975_Epitope_Rep2 1139.51752729727 1139.51642993586 54.932 2 0.11283044910957446 0.0013854733123203214 0.007092867372553593 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 90682 5974 REQLEQQVP True H1975_Epitope_Rep2 1125.5778361380499 1125.5767299358602 27.958 2 0.11282764486489545 0.0013854733123203214 0.007093319741245562 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENST00000538033.2_1_2:114353729-114354265:+|nuORF', 'ENST00000482170.6_1_X:155252010-155252984:+|nuORF', 'ENSG00000181404|ENST00000696149|WASHC1'] 110358 7712 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 34.619 2 0.11280879938128899 0.0013854733123203214 0.007096360539247158 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 137790 7344 YEQGPDTPVSA True H1975_Epitope_Rep1 1162.51423282198 1162.5131299358602 33.258 2 0.11278687265810775 0.0013854733123203214 0.007099900098665111 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 136832 12301 YADEYAIGY True H1975_Epitope_Rep2 1063.4498416602698 1063.44927496793 52.399 1 0.11277229401088015 0.0013854733123203214 0.007102254429299553 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A', 'ENST00000468111.1_1_3:20168975-20187957:+|nuORF', 'ENSG00000114166|ENST00000263754|KAT2B'] 11815 21242 DHFLSNLL True PC9_epitope_Rep1 957.49198125577 957.49088993586 86.532 2 0.11277073831182999 0.0013854733123203214 0.007102505706477926 ['ENST00000561691.5_1_15:43691337-43697409:+|nuORF', 'ENST00000563963.1_1_15:43687726-43694213:+|nuORF', 'ENSG00000137822|ENST00000564079|TUBGCP4', 'nc|ENSG00000137822|Q9UGJ1|TUBGCP4'] 41077 8173 HTMEFALVK True NCI_RA007_Epitope_Rep5 1074.55320161334 1074.55210993586 38.12 2 0.11276402194645944 0.0013854733123203214 0.007103590635613348 ['ENSG00000182636|ENST00000649030|NDN'] 73894 20678 NAVVELVTV True PC9_epitope_Rep3 942.5385970950199 942.53750993586 84.811 2 0.11276297800646957 0.0013854733123203214 0.00710375928304837 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 134787 22081 VYTVVDEMF True PC9_epitope_Rep3 1101.5052483614097 1101.5041499358601 90.23 2 0.11274953304374462 0.0013854733123203214 0.007105931649896863 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 14162 13492 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.45847496793 57.03 1 0.11273344473640423 0.0013854733123203214 0.007108531960867292 ['ENSG00000149823|ENST00000279281|VPS51'] 21743 8789 ERTNIQVTV True PC9_epitope_Rep6 1058.57202248162 1058.57092993586 43.706 2 0.11273310484196902 0.0013854733123203214 0.007108586907062286 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.G1211W|1|0.07|ENSG00000156535|chr6:73811076-73811076|G/T|missense_variant'] 57822 8366 LEESSPIAA True H1975_Epitope_Rep2 915.4549270407099 915.4543749679301 37.133 1 0.1127292811782106 0.0013854733123203214 0.007109205056093547 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 21807 7499 ERYKEVAEL True PC9_epitope_Rep4 1135.5873381925899 1135.58569490379 36.207 3 0.11272920364450224 0.0013854733123203214 0.007109217591047068 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 77070 18585 NRLEEPGNFVL True PC9_epitope_Rep2 1286.6619001151798 1286.66080993586 76.839 2 0.11272822107807627 0.0013854733123203214 0.007109376445416994 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 106676 16580 STTNGGILTV True PC9_epitope_Rep1 961.50802524273 961.5074749679301 68.6 1 0.11272701884001177 0.0013854733123203214 0.007109570819419674 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 72059 19484 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55652993586 81.661 2 0.11272375271989821 0.0013854733123203214 0.007110098901273431 ['ENSG00000198712|ENST00000361739|MT-CO2'] 90667 14924 REQEIPFVFA True H1975_Epitope_Rep2 1234.6346227381798 1234.63352993586 62.558 2 0.1127169673018173 0.0013854733123203214 0.007111196121529132 ['ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 17702 6488 EHNDLQYAA True PC9_epitope_Rep4 1059.46213767947 1059.46104993586 32.074 2 0.11270980033999 0.0013854733123203214 0.007112355216654673 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 108115 19718 SYDPDFNQL True PC9_epitope_Rep1 1097.46655435357 1097.46597496793 80.671 1 0.11270871698735287 0.0013854733123203214 0.007112530440546664 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 111362 14686 THQTIVVQL True PC9_epitope_Rep5 1037.58694426977 1037.58584993586 61.494 2 0.11270829182628617 0.0013854733123203214 0.007112599208197072 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 36677 13098 GVIPYFPYSK True NCI_RA007_Epitope_Rep3 1169.6120963884498 1169.61098993586 58.802 2 0.11269870115084538 0.0013854733123203214 0.007114150622650169 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'nc|ENSG00000141127|O60256-4|PRPSAP2', 'nc|ENSG00000141127|O60256-3|PRPSAP2', 'nc|ENSG00000141127|O60256-2|PRPSAP2', 'ENSG00000141127|ENST00000268835|PRPSAP2'] 88754 5285 QTMSDTTFK True NCI_RA007_Epitope_Rep4 1057.47501086229 1057.47390993586 26.88 2 0.11269686056890067 0.0013854733123203214 0.007114448397839837 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF'] 121647 10907 VFIDKQTNL True PC9_epitope_Rep6 1076.5866099166 1076.58550993586 52.819 2 0.11268944051401884 0.0014150129421915444 0.007115648960398023 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 29323 14668 FVDEPLIHA True PC9_epitope_Rep6 1039.5338460677497 1039.53274993586 68.345 2 0.11268892692025992 0.0014150129421915444 0.007115732066973596 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 106211 10187 STDWHVVNY True H1975_Epitope_Rep1 1119.49852318819 1119.49742993586 44.124 2 0.11268508189390924 0.0014150129421915444 0.007116354275319184 ['ENSG00000147251|ENST00000276202|DOCK11'] 109759 9124 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.4816749679301 40.047 1 0.11267619720810927 0.0014150129421915444 0.007117792211175561 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 9550 5515 AWAPKPYHKF True NCI_RA007_Epitope_Rep3 1243.6502132326698 1243.64857490379 28.694 3 0.11267537762036389 0.0014150129421915444 0.00711792487097658 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 65754 6782 LSDDHGASWRY True H1975_Epitope_Rep2 1305.5738133867699 1305.57270993586 31.003 2 0.11267399761770457 0.0014150129421915444 0.007118148245858694 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 96923 11942 SAVPPGTSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 51.257 2 0.11266370865320399 0.0014150129421915444 0.007119813888889325 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 115466 18057 TRNDIVNML True PC9_epitope_Rep3 1074.54917886206 1074.5480899358602 74.655 2 0.11266008439505502 0.0014150129421915444 0.007120400696822327 ['ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18', 'ENST00000465772.5_1_10:27793310-27827017:+|nuORF'] 1054 8483 AEAFGKIVA True H1975_Epitope_Rep1 904.5018176634799 904.50072993586 37.559 2 0.1126398508437339 0.0014150129421915444 0.007123677596566738 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 111636 15876 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.56467496793 66.516 1 0.11263657177104637 0.0014150129421915444 0.007124208792338078 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 43083 13101 IEVPTSFSA True H1975_Epitope_Rep2 949.47566248529 949.47511496793 55.518 1 0.11263466082125248 0.0014150129421915444 0.007124518375749038 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462'] 74158 9130 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.5032299358602 40.108 2 0.11263387442496649 0.0014150129421915444 0.007124645779661982 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 132226 16385 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 70.985 2 0.11263199322775892 0.0014150129421915444 0.007124950561023619 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 54469 8562 KYGPIRQI True PC9_epitope_Rep5 973.5709002828098 973.56980993586 37.875 2 0.11261816929759873 0.0014150129421915444 0.007127190626812933 ['ENST00000478050.1_1_2:24296944-24299099:-|nuORF', 'ENSG00000115128|ENST00000233468|SF3B6'] 71520 19737 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep1 1000.5415746809199 1000.5410749679301 82.149 1 0.11261030470980239 0.0014150129421915444 0.007128465329793498 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 31228 8632 GDAGAEYVVE True H1975_Epitope_Rep1 1008.4400052525599 1008.4394749679301 38.131 1 0.11259972776109958 0.0014150129421915444 0.007130180004292386 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6645960-6646242:+|nuORF', 'ENST00000425487.2_1_X:46299833-46299950:-|nuORF', 'ENST00000507324.1_1_15:64821358-64821781:-|nuORF'] 118227 10453 TYLDKVENI True NCI_RA007_Epitope_Rep3 1093.56554011885 1093.56444993586 48.18 2 0.11259812541416223 0.0014150129421915444 0.007130439802487343 ['IFIT1|p.S394Yfs*3|1|0.1|ENSG00000185745|chr10:89403455-89403456|-/ATGG|frameshift_variant', 'ENSG00000185745|ENST00000371804|IFIT1', 'nc|ENSG00000185745|P09914-2|IFIT1'] 17410 14105 EHDPSSIYL True PC9_epitope_Rep5 1059.48728979815 1059.48618993586 59.265 2 0.11259587204136753 0.0014150129421915444 0.0071308051709628424 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'HEATR5B|p.G877Wfs*15|1|0.44|ENSG00000008869|chr2:37049720-37049721|-/A|frameshift_variant', 'HEATR5B|p.R763C|1|0.1|ENSG00000008869|chr2:37056552-37056552|G/A|missense_variant', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 31380 15148 GDSVIVVLR True PC9_epitope_Rep1 956.5654805492 956.56438993586 63.088 2 0.11258417636581597 0.0014150129421915444 0.00713270183361533 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 22466 16284 ETEYSFLDY True H1975_Epitope_Rep2 1165.4815357113698 1165.48042993586 67.851 2 0.11258141117433633 0.0014150129421915444 0.007133150330252313 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 40324 12552 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5445349679301 53.589 1 0.11257912559559376 0.0014150129421915444 0.007133521057356532 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 75132 12177 NHYNMQYAL True PC9_epitope_Rep6 1152.50222866964 1152.50112993586 58.197 2 0.1125787092024229 0.0014150129421915444 0.007133588599475079 ['ENSG00000241945|ENST00000291576|PWP2'] 5528 11485 AMDPVSVSY True H1975_Epitope_Rep3 967.4320834211501 967.43153496793 49.299 1 0.11257507077076738 0.0014150129421915444 0.007134178806950738 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 92989 6590 RPKPIITSV True PC9_epitope_Rep2 1009.62841515893 1009.62730993586 30.761 2 0.11256926703390462 0.0014150129421915444 0.007135120356938725 ['ENSG00000168802|ENST00000448552|CHTF8'] 8568 16924 ATVPGLLKV True PC9_epitope_Rep1 896.5695033004799 896.56840993586 69.923 2 0.11256465220130274 0.0014150129421915444 0.0071358691149401125 ['ENSG00000179820|ENST00000391770|MYADM'] 55016 6221 KYQPPPPP True NCI_RA007_Epitope_Rep4 922.4912529797798 922.49014993586 30.537 2 0.11256178120384257 0.0014150129421915444 0.00713633497357966 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 48322 19694 IYSAERFLI True PC9_epitope_Rep2 1110.60734536118 1110.6062499358602 81.139 2 0.1125598210940808 0.0014150129421915444 0.007136653045151598 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 45645 16618 IRDPFIHEI True PC9_epitope_Rep5 1138.6134933707801 1138.6118549037901 68.926 3 0.1125596784317837 0.0014150129421915444 0.007136676195830883 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 15070 19850 DYSDIVTTL True PC9_epitope_Rep6 1025.49170647225 1025.4906099358602 89.013 2 0.11254339263665612 0.0014150129421915444 0.007139319469368157 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF'] 130160 15434 VSDYYSQLIY True H1975_Epitope_Rep2 1249.58666948625 1249.5855699358601 64.524 2 0.1125352779736423 0.0014150129421915444 0.007140636877642378 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C'] 87160 16175 QPFGDHIISV True PC9_epitope_Rep6 1111.56620882519 1111.5651099358602 74.573 2 0.11253502160982806 0.0014150129421915444 0.007140678501916896 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 103725 6934 SPVFTSRSAA True PC9_epitope_Rep5 1021.51925863277 1021.51816993586 31.641 2 0.11253114240916638 0.0014150129421915444 0.0071413083734581375 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 73098 20406 M[Oxidation]RFLAATFL True PC9_epitope_Rep2 1084.57393743836 1084.57282993586 83.917 2 0.11252962381864766 0.0014150129421915444 0.007141554963908402 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 76848 18260 NRDELELEL True PC9_epitope_Rep2 1129.5615173675699 1129.5604299358602 75.558 2 0.11252362056450485 0.0014150129421915444 0.00714252985991334 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 40428 17720 HQYDGLVEL True PC9_epitope_Rep5 1072.5189242795998 1072.5178299358602 73.176 2 0.11251769346260841 0.0014150129421915444 0.007143492515732775 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 86183 20488 QIFNGTFVKL True PC9_epitope_Rep1 1165.64954452633 1165.64844993586 83.62 2 0.11251740369307561 0.0014150129421915444 0.0071435395821471594 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 45095 10104 IPLDPVAGYK True H1975_Epitope_Rep1 1071.5964463243097 1071.5953499358602 43.802 2 0.11251355902385038 0.0014150129421915444 0.00714416408892731 ['CON__P12763'] 9468 8253 AVVIVDDR True PC9_epitope_Rep1 885.4919812557699 885.49088993586 36.579 2 0.11251097225454386 0.0014150129421915444 0.0071445842991841365 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 106504 16917 STLNEIYFGK True PC9_epitope_Rep1 1170.5920892198599 1170.59098993586 69.896 2 0.11250299121908448 0.0014150129421915444 0.007145880937214054 ['ENSG00000077549|ENST00000264202|CAPZB', 'nc|ENSG00000077549|P47756-1|CAPZB'] 107405 12658 SVLNLVIVK True NCI_RA007_Epitope_Rep3 983.6379172134699 983.63682993586 57.033 2 0.11250098843185498 0.0014150129421915444 0.007146206355608391 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 72315 22224 MIIENFEAL True PC9_epitope_Rep5 1078.53688284286 1078.53578993586 90.49 2 0.11249045228731576 0.0014150129421915444 0.007147918533953643 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-6|RBM26', 'ENST00000472143.2_1_13:79951480-79979915:-|nuORF'] 17190 13043 EGSPIKVTL True PC9_epitope_Rep6 942.53859709502 942.53750993586 61.765 2 0.11248937234323762 0.0014150129421915444 0.007148094052949448 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF'] 40378 7095 HQSSVGSVL True PC9_epitope_Rep2 912.46649478392 912.46538993586 32.69 2 0.11248808802927791 0.0014150129421915444 0.007148302792802479 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant', 'UTRN|p.Q931Rfs*4|1|0.33|ENSG00000152818|chr6:144461278-144461278|C/-|frameshift_variant'] 96541 20934 SADTTILFV True PC9_epitope_Rep4 965.50696261357 965.50586993586 88.682 2 0.11248079821005062 0.0014150129421915444 0.007149487720778495 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 89608 16410 QYPVYWDHLEF True NCI_RA007_Epitope_Rep4 1495.67721582615 1495.67610993586 71.124 2 0.11247959192517816 0.0014150129421915444 0.007149683815419719 ['ENSG00000090487|ENST00000204566|SPG21'] 102474 22396 SLVELLNQI True PC9_epitope_Rep4 1027.5913609438699 1027.59026993586 94.38 2 0.11247839301456874 0.0014150129421915444 0.00714987871645912 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 42479 4532 IEEELGSK True NCI_RA007_Epitope_Rep2 903.4549270407099 903.45382993586 22.256 2 0.11247630115402299 0.0014150129421915444 0.007150218792335163 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 13991 13150 DRDPTAYAL True PC9_epitope_Rep5 1020.4876241513199 1020.48652993586 55.586 2 0.11246928482867412 0.0014150129421915444 0.0071513595578768414 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 105105 6121 SREESAGPAL True PC9_epitope_Rep5 1015.4934378077497 1015.49234993586 28.529 2 0.11246312010240185 0.0014150129421915444 0.007152362009761803 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 140950 10133 YSEVYPGQQY True H1975_Epitope_Rep2 1232.5349682665599 1232.53437496793 43.975 1 0.11245881760287961 0.0014150129421915444 0.007153061723899861 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 137791 7497 YEQGPDTPVSA True H1975_Epitope_Rep2 1162.51423282198 1162.5131299358602 33.787 2 0.11245796295038528 0.0014150129421915444 0.0071532007236617835 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 129043 9346 VQNDVRITL True NCI_RA007_Epitope_Rep3 1056.5927579262 1056.5916699358602 43.856 2 0.11244796813054533 0.0014150129421915444 0.007154826464706719 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 99531 13920 SIDSLQLGY True H1975_Epitope_Rep3 994.49712620586 994.49602993586 58.857 2 0.11244585453426327 0.0014150129421915444 0.007155170304681218 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 109163 19485 TAM[Oxidation]DVVYAL True PC9_epitope_Rep2 997.4790339940099 997.47792993586 80.331 2 0.11244487392842302 0.0014150129421915444 0.007155329835137933 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 21718 11530 ERSPVIQTL True PC9_epitope_Rep2 1041.58185888933 1041.5807699358602 49.676 2 0.11244418882167528 0.0014150129421915444 0.007155441294190528 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 142744 12976 YYQHIVTTL True PC9_epitope_Rep6 1136.5866099166 1136.58550993586 61.482 2 0.11243910093252105 0.0014150129421915444 0.0071562690883595 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 90200 2956 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 15.69 2 0.11243542968654334 0.0014150129421915444 0.007156866453823593 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 97276 9137 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 40.097 1 0.11243160042627437 0.0014150129421915444 0.007157489582010022 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 73910 16899 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.5431349679301 70.249 1 0.11242830356871163 0.0014150129421915444 0.007158026115440611 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 96170 13072 RYPDRITLI True PC9_epitope_Rep6 1145.65569253593 1145.65405490379 61.888 3 0.112424702908517 0.0014150129421915444 0.007158612134497455 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 99279 8227 SHQTGVVAL True PC9_epitope_Rep2 910.4872302284999 910.48612993586 37.003 2 0.11242319727629385 0.0014150129421915444 0.007158857194780745 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 40052 8279 HPTENLIASA True PC9_epitope_Rep4 1051.52982331647 1051.5287299358602 39.306 2 0.11242250176209652 0.0014150129421915444 0.007158970401071373 ['ENSG00000196981|ENST00000330689|WDR5B'] 90873 6315 REVDPPMGP True H1975_Epitope_Rep2 996.4698659121999 996.46876993586 29.226 2 0.11241708625630957 0.0014150129421915444 0.007159851922391997 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 115004 8007 TRAGPGTLSV True PC9_epitope_Rep2 957.52434401321 957.52324993586 36.161 2 0.11241268043847319 0.0014150129421915444 0.007160569167043652 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 36631 16039 GVIDLIFEK True NCI_RA007_Epitope_Rep4 1032.58554728744 1032.5849749679298 69.565 1 0.1124113742723809 0.0014150129421915444 0.007160781817594962 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 141671 22267 YTTDFIYQL True PC9_epitope_Rep5 1162.55464108198 1162.55354993586 90.657 2 0.11239563476135132 0.0014150129421915444 0.007163344772065395 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 38080 10017 HAVGDIPGV True PC9_epitope_Rep6 863.45011644379 863.44900993586 49.098 2 0.11239436635074507 0.0014150129421915444 0.007163551353306098 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 86089 13126 QHSVPLQL True PC9_epitope_Rep1 920.50796567308 920.50686993586 55.357 2 0.11239316848882437 0.0014150129421915444 0.007163746449849072 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 21907 7473 ESDPAYQQY True H1975_Epitope_Rep2 1099.44581890899 1099.44472993586 33.692 2 0.11239286632765474 0.0014150129421915444 0.007163795663846647 ['ENSG00000155660|ENST00000652332|PDIA4'] 47829 20197 IYGYVAEQF True PC9_epitope_Rep2 1088.5178616504397 1088.51676993586 83.103 2 0.11238669420771781 0.0014150129421915444 0.007164801009302474 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 52871 11494 KPFGQVIST True PC9_epitope_Rep3 975.5389314481899 975.53782993586 49.213 2 0.11238311601846897 0.0014150129421915444 0.007165383905083603 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 133922 16482 VYIHPSSALF True PC9_epitope_Rep6 1132.59169529704 1132.5905899358602 75.823 2 0.11237835786378941 0.0014150129421915444 0.00716615909129745 ['ENSG00000067596|ENST00000262415|DHX8'] 64066 6667 LPASNLAGKEA True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 32.819 2 0.11236619499805531 0.0014150129421915444 0.007168141003185107 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 8378 6313 ATLNSIVAK True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 31.834 2 0.11236476867414448 0.0014150129421915444 0.007168373454280439 ['ENSG00000007944|ENST00000356840|MYLIP'] 87007 16177 QMISRIEYV True PC9_epitope_Rep1 1137.58523001761 1137.5841299358601 67.039 2 0.11235983072223862 0.0014150129421915444 0.007169178259406798 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 114765 5893 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.54912993586 29.29 2 0.11235903803035895 0.0014150129421915444 0.0071693074633297745 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 65332 8088 LRDENVNVV True PC9_epitope_Rep4 1056.5563724174801 1056.55526993586 38.561 2 0.11235731338738579 0.0014150129421915444 0.007169588577369326 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 29552 8100 FVIATSTK True PC9_epitope_Rep2 865.49091862661 865.48982993586 36.515 2 0.112357241412664 0.0014150129421915444 0.007169600309365749 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 15019 10893 DYLADKSYI True NCI_RA007_Epitope_Rep3 1086.5233409537 1086.5222499358601 49.922 2 0.11235629385619227 0.0014150129421915444 0.007169754764342303 ['ENST00000414101.1_1_3:174777654-174777819:-|nuORF', 'ENST00000479587.1_1_2:207024402-207025435:+|nuORF', 'ENST00000460760.1_1_2:207024637-207025435:+|nuORF', 'ENSG00000114942|ENST00000392222|EEF1B2'] 104221 16012 SQHGVIIQL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 66.402 2 0.11234647063124596 0.0014150129421915444 0.0071713561738979475 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 35835 8089 GTLIDNQFK True NCI_RA007_Epitope_Rep3 1034.53965972418 1034.53856993586 38.916 2 0.11233955617305323 0.0014150129421915444 0.007172483596000069 ['ENST00000469448.1_1_X:118673692-118676584:-|nuORF', 'nc|ENSG00000018610|Q9H5V9-2|STEEP1', 'nc|ENSG00000018610|Q9H5V9-3|STEEP1', 'ENSG00000018610|ENST00000644802|STEEP1'] 113655 14244 TLVYHVVGV True PC9_epitope_Rep6 985.5596668927699 985.55856993586 66.681 2 0.11233195131300977 0.0014150129421915444 0.007173723788402798 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 71213 21055 LYPEGLAQL True PC9_epitope_Rep1 1002.5385970950199 1002.53807496793 85.818 1 0.1123170390977384 0.0014150129421915444 0.0071761562596312075 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 96219 12891 RYPTSIASL True PC9_epitope_Rep6 1006.5447451046199 1006.54364993586 61.113 2 0.11231333836755784 0.0014150129421915444 0.007176760044183144 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 130 19813 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.5056249679301 82.951 1 0.11230655755317985 0.0014150129421915444 0.007177866480866431 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 69874 18100 LVIDAVREI True PC9_epitope_Rep4 1026.6073453611798 1026.6062499358602 77.688 2 0.1122946605501941 0.0014150129421915444 0.007179808133870283 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 20822 18969 EQIKFFEEV True PC9_epitope_Rep4 1167.5811901829898 1167.58008993586 81.054 2 0.11229029432337669 0.0014150129421915444 0.007180520852526753 ['ENSG00000143155|ENST00000367833|TIPRL', 'nc|ENSG00000143155|O75663-2|TIPRL'] 17910 7082 EIAENALGK True PC9_epitope_Rep1 943.4974605590298 943.49636993586 32.048 2 0.1122891852946366 0.0014150129421915444 0.007180701895145566 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 137772 13333 YEPPVQESV True PC9_epitope_Rep2 1046.49204082542 1046.49094993586 56.559 2 0.11228899791523128 0.0014150129421915444 0.007180732484201889 ['ENSG00000145425|ENST00000274065|RPS3A'] 9526 5918 AVYADSGNFK True NCI_RA007_Epitope_Rep4 1070.50327421546 1070.5021699358601 29.385 2 0.11228538970934511 0.0014150129421915444 0.007181321536273502 ['ENSG00000145780|ENST00000274457|FEM1C'] 138769 17200 YITERIIAV True PC9_epitope_Rep2 1076.62299542532 1076.62188993586 71.418 2 0.11227906729672284 0.0014150129421915444 0.007182353804857883 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 107547 8955 SVPEEFHTT True PC9_epitope_Rep1 1045.47163973401 1045.4705499358602 39.288 2 0.1122779562211034 0.0014150129421915444 0.007182535226479864 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 86084 8001 QHSTAQLNL True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 36.137 2 0.11227151348978513 0.0014150129421915444 0.007183587313291954 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 53449 7333 KRFDDKYTL True PC9_epitope_Rep2 1184.6189726740397 1184.61733490379 33.588 3 0.11227006354534314 0.0014150129421915444 0.0071838241072772115 ['ENSG00000118363|ENST00000263672|SPCS2'] 114314 22851 TPQSIFIFA True PC9_epitope_Rep1 1022.5436824754598 1022.5425899358601 92.69 2 0.1122645554465459 0.0014150129421915444 0.007184723717342047 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 95820 14507 RYIPTAAAF True PC9_epitope_Rep2 1008.5392658013599 1008.53816993586 61.073 2 0.11226005248185916 0.0014150129421915444 0.007185459244995687 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 78321 12958 NYISGIQTI True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52817496793 58.244 1 0.11225319823679182 0.0014150129421915444 0.007186578977823462 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 6347 7045 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 31.906 2 0.11224523294737994 0.0014150129421915444 0.007187880427019218 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 14955 14029 DYFEEYGK True PC9_epitope_Rep5 1049.4341915961297 1049.4330899358602 58.979 2 0.11224308919300466 0.0014150129421915444 0.007188230734191986 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 31992 5333 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 25.567 1 0.11224051337348372 0.0014150129421915444 0.007188651666255062 ['ENSG00000108344|ENST00000264639|PSMD3'] 47803 21077 IYGEGFQTW True PC9_epitope_Rep1 1099.4974605590298 1099.49636993586 85.905 2 0.11223990869352543 0.0014150129421915444 0.007188750484551578 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 21352 19191 ERFNVPVSL True PC9_epitope_Rep5 1059.5712942056298 1059.57077496793 78.857 1 0.11223705829439505 0.0014150129421915444 0.00718921632156145 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 65356 13177 LRDPGSVIV True PC9_epitope_Rep3 954.5498304850599 954.54872993586 55.718 2 0.11223539499616385 0.0014150129421915444 0.007189488165732388 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C'] 40298 13990 HQNQLLSSL True PC9_epitope_Rep2 1038.5458077337798 1038.54470993586 59.085 2 0.11223046316159212 0.0014150129421915444 0.0071902942676258545 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 9148 16065 AVLDLVHSA True PC9_epitope_Rep1 923.50763131991 923.50652993586 66.61 2 0.11222832920099624 0.0014449375580555268 0.007190643087826939 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 89048 20305 QVLPHLLEV True PC9_epitope_Rep1 1046.6124307416198 1046.61132993586 82.932 2 0.11222512446877969 0.0014449375580555268 0.007191166968661303 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 7507 12347 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep2 1084.4746768895598 1084.47417496793 52.577 1 0.1122237210104029 0.0014449375580555268 0.007191396405071756 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 13990 11954 DRDPTAYAL True PC9_epitope_Rep4 1020.4876241513199 1020.48652993586 53.771 2 0.11221994980831741 0.0014449375580555268 0.007192012953727666 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 105112 13448 SREPSQVIF True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 56.586 2 0.11221922736825955 0.0014449375580555268 0.007192131070306407 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 105670 16552 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.51187496793 69.042 1 0.1122132050396843 0.0014449375580555268 0.007193115774399458 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 14202 19725 DSEGYLLFY True H1975_Epitope_Rep2 1105.49679185269 1105.4956899358601 81.841 2 0.11220595892772169 0.0014449375580555268 0.007194300751043499 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 86694 9232 QLIVGVNK True PC9_epitope_Rep3 869.53345214493 869.53234993586 40.452 2 0.11219717004800397 0.0014449375580555268 0.007195738274548459 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 32834 15423 GHMGEGFAL True PC9_epitope_Rep1 917.4065373796499 917.40544993586 64.144 2 0.11218564030270045 0.0014449375580555268 0.007197624520475241 ['ENSG00000105447|ENST00000253237|GRWD1'] 70 12907 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44850496793 54.874 1 0.11218083689157567 0.0014449375580555268 0.007198410491374865 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 32035 13066 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 55.347 2 0.11217695170243705 0.0014449375580555268 0.00719904627658694 ['ENSG00000051523|ENST00000261623|CYBA'] 29392 16744 FVDPNGKISL True PC9_epitope_Rep3 1088.5866099165999 1088.58550993586 69.545 2 0.11216121924047537 0.0014449375580555268 0.007201621344930933 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 35257 7757 GRDENSVEL True PC9_epitope_Rep3 1017.4727023631699 1017.47160993586 34.829 2 0.11216017655441265 0.0014449375580555268 0.007201792041917157 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 109154 21595 TAMDVVYAL True PC9_epitope_Rep3 981.4841189940099 981.48302993586 88.36 2 0.112159010701287 0.0014449375580555268 0.007201982907088843 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 67413 6223 LSSPATLNSR True PC9_epitope_Rep4 1044.5563724174801 1044.55526993586 30.984 2 0.1121586628231679 0.0014449375580555268 0.0072020398601665035 ['CON__P00761'] 54951 13234 KYQDILNEI True NCI_RA007_Epitope_Rep5 1134.5920892198599 1134.59098993586 57.584 2 0.11215856657749071 0.0014449375580555268 0.007202055617163084 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 6912 13923 AQIGSYVHV True PC9_epitope_Rep3 972.50288029264 972.50178993586 58.634 2 0.11214778846679688 0.0014449375580555268 0.0072038203820254795 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 34012 9706 GLTSVINQK True PC9_epitope_Rep1 958.5447451046199 958.54364993586 42.191 2 0.11214326207519386 0.0014449375580555268 0.007204561640232987 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 139961 21167 YQDEVFGGF True PC9_epitope_Rep2 1060.4501760134397 1060.44906993586 86.874 2 0.11212917812131952 0.0014449375580555268 0.007206868551953997 ['ENSG00000145907|ENST00000356245|G3BP1'] 35880 5790 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep4 1016.46708941132 1016.46598993586 28.895 2 0.11212536584759714 0.0014449375580555268 0.007207493114632761 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 134057 7949 VYKDHQTITI True PC9_epitope_Rep2 1216.6451874218799 1216.6435349037902 35.94 3 0.1121231490986828 0.0014449375580555268 0.007207856307479442 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 45443 16115 IQIMKVEEI True PC9_epitope_Rep6 1101.61038213629 1101.60928993586 74.326 2 0.11212176003115391 0.0014449375580555268 0.007208083901780169 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 9615 20491 AYALLSHFL True PC9_epitope_Rep4 1033.5596668927699 1033.55856993586 86.967 2 0.11211482448479626 0.0014449375580555268 0.0072092203731703485 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 77040 10123 NRITDASAL True PC9_epitope_Rep5 959.5036085686299 959.50250993586 43.922 2 0.11211040797980264 0.0014449375580555268 0.007209944160262638 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 84252 22559 PYNDYFEYF True PC9_epitope_Rep2 1256.50260550912 1256.50207496793 92.266 1 0.11210504293383364 0.0014449375580555268 0.007210823491144524 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 31837 10604 GEISALTAEA True NCI_RA007_Epitope_Rep3 960.47639076128 960.47584496793 48.761 1 0.11208339869472783 0.0014449375580555268 0.007214372036389262 ['ENSG00000125968|ENST00000376112|ID1'] 142528 21278 YYITGNLETF True PC9_epitope_Rep2 1219.57610480255 1219.5750099358602 87.308 2 0.11208053362443623 0.0014449375580555268 0.007214841887748803 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 127657 9349 VPAGGAVAV True PC9_epitope_Rep4 739.42283906679 739.42229496793 43.567 1 0.11207720888345389 0.0014449375580555268 0.0072153871590220145 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 309 9008 AAHLLNDAL True NCI_RA007_Epitope_Rep3 936.50288029264 936.50178993586 42.529 2 0.11207520065544666 0.0014449375580555268 0.007215716536059396 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 4564 9980 AKLRLEVNL True NCI_RA007_Epitope_Rep4 1054.6498788795 1054.6487899358601 45.231 2 0.11206873011136884 0.0014449375580555268 0.0072167778934250585 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 18826 17505 ELDPAVMDQFY True H1975_Epitope_Rep2 1326.5802042068199 1326.57910993586 72.625 2 0.11205841287559468 0.0014449375580555268 0.007218470532874797 ['ENSG00000123505|ENST00000368885|AMD1', 'nc|ENSG00000123505|P17707-2|AMD1'] 32088 9261 GESQTLLAA True H1975_Epitope_Rep2 888.4552613938798 888.45471496793 40.58 1 0.1120567979756647 0.0014449375580555268 0.007218735507182714 ['ENSG00000144747|ENST00000398559|TMF1', 'nc|ENSG00000144747|P82094-2|TMF1'] 78576 21500 NYQVQFVTL True PC9_epitope_Rep3 1110.57095985246 1110.5698699358602 87.993 2 0.11205522898780952 0.0014449375580555268 0.007218992957217601 ['ENSG00000125484|ENST00000372146|GTF3C4'] 124669 17620 VGYFGRFEEA True PC9_epitope_Rep5 1173.5454733806098 1173.54436993586 72.785 2 0.11205339235095495 0.0014449375580555268 0.007219294336191722 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35', 'ENST00000445063.5_1_2:20113365-20153734:-|nuORF'] 26539 12216 FIHQHFVEV True PC9_epitope_Rep4 1154.5872786229402 1154.5856249037902 54.808 3 0.11205142325418943 0.0014449375580555268 0.0072196174644275635 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 21368 13657 ERGPVLQL True PC9_epitope_Rep2 910.5236157372199 910.52250993586 57.824 2 0.11205043983270763 0.0014449375580555268 0.0072197788488667786 ['nc|ENSG00000076706|P43121-2|MCAM', 'ENST00000528533.5_1_11:119181936-119187838:-|nuORF', 'ENSG00000076706|ENST00000264036|MCAM'] 87936 18018 QRLETILSL True PC9_epitope_Rep6 1071.62880908175 1071.6277099358601 81.934 2 0.11204961770147079 0.0014449375580555268 0.0072199137674427 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 1894 10035 AEIETELQA True H1975_Epitope_Rep2 1002.4869554449798 1002.48584993586 43.591 2 0.11204404804164093 0.0014449375580555268 0.007220827859277182 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 99132 13630 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 57.719 2 0.11204285337680346 0.0014449375580555268 0.007221023942112982 ['ENSG00000132646|ENST00000379143|PCNA'] 46315 11829 ISQIVSSITAS True NCI_RA007_Epitope_Rep1 1104.60265390356 1104.6020749679299 49.992 1 0.11203683520566506 0.0014449375580555268 0.0072220117955510916 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 1630 6362 AEFPSKPVA True H1975_Epitope_Rep2 944.4967322830398 944.49562993586 29.399 2 0.11203664706270873 0.0014449375580555268 0.007222042680409691 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C'] 48018 14161 IYLLIHNNF True NCI_RA007_Epitope_Rep4 1145.62332977849 1145.62222993586 61.748 2 0.11203580942734134 0.0014449375580555268 0.007222180185116341 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 83025 6254 PSIQNQIVEK True H1975_Epitope_Rep3 1154.6295373577398 1154.62844993586 29.067 2 0.11203267404860665 0.0014449375580555268 0.0072226949057291635 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF', 'ENST00000487650.2_1_17:19643643-19644639:-|nuORF'] 104746 14012 SQVPEVTTV True PC9_epitope_Rep1 958.49712620586 958.49602993586 58.735 2 0.11203180121576911 0.0014449375580555268 0.007222838200978197 ['ENSG00000196455|ENST00000356763|PIK3R4'] 35024 11075 GQVDMDIKL True NCI_RA007_Epitope_Rep3 1017.51648175145 1017.51538993586 50.664 2 0.11202989401735143 0.0014449375580555268 0.0072231513203113345 ['ENSG00000129250|ENST00000320785|KIF1C', 'KIF1C|p.D675Gfs*5|1|0.04|ENSG00000129250|chr17:5022102-5022103|-/G|frameshift_variant'] 31889 14646 GELPITVSV True H1975_Epitope_Rep1 913.51204799401 913.51149496793 61.548 1 0.1120250414403691 0.0014449375580555268 0.007223948064229239 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF', 'WDR19|p.H891Tfs*26|1|0.25|ENSG00000157796|chr4:39245391-39245391|C/-|frameshift_variant', 'nc|ENSG00000157796|Q8NEZ3-2|WDR19'] 88272 11090 QSEIASM[Oxidation]LY True H1975_Epitope_Rep2 1056.47976227 1056.4786699358601 47.692 2 0.11202329996129985 0.0014449375580555268 0.007224234018183652 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 125321 8934 VIPELNGK True PC9_epitope_Rep1 868.50181766348 868.50072993586 39.205 2 0.11202016293059307 0.0014449375580555268 0.007224749151857809 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 13954 19749 DRDDFPVVL True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 84.088 2 0.11201440743704323 0.0014449375580555268 0.007225694357390912 ['ENSG00000126458|ENST00000246792|RRAS'] 87698 20140 QQYNSFVSL True PC9_epitope_Rep2 1084.5189242796 1084.5178299358602 82.88 2 0.11200954348124026 0.0014449375580555268 0.007226493242032555 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 16264 9985 EEEYPGITA True H1975_Epitope_Rep3 1007.4447562798298 1007.44364993586 43.443 2 0.11200860270132827 0.0014449375580555268 0.007226647771119273 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 110199 8828 TEQEVYAQVA True H1975_Epitope_Rep2 1136.5349682665599 1136.5338699358601 38.923 2 0.11199836179300401 0.0014449375580555268 0.007228330112537346 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 134919 13448 VYVVGTAHF True PC9_epitope_Rep6 991.5127167003499 991.51160993586 63.418 2 0.1119969527465267 0.0014449375580555268 0.0072285616155622 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 40383 18954 HQTIVVQLL True PC9_epitope_Rep2 1049.62332977849 1049.62222993586 78.271 2 0.11199035815270131 0.0014449375580555268 0.007229645187290274 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 45879 9106 ISDSDYQAEY True H1975_Epitope_Rep2 1189.47751296009 1189.4764099358601 39.978 2 0.11198862485755001 0.0014449375580555268 0.0072299300148092474 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 4698 15737 ALATLIHQV True PC9_epitope_Rep2 964.5705659296401 964.56946993586 65.804 2 0.11198371238119607 0.0014449375580555268 0.0072307373272923695 ['ENSG00000111652|ENST00000543155|COPS7A'] 64850 14134 LQDPNHLTL True PC9_epitope_Rep3 1049.55055876105 1049.54946993586 59.451 2 0.11197389234094414 0.0014449375580555268 0.007232351406679493 ['ENSG00000188997|ENST00000340067|KCTD21'] 45125 14870 IPLYLKGGVA True PC9_epitope_Rep4 1029.6222671493297 1029.62116993586 65.136 2 0.111962009842092 0.0014449375580555268 0.0072343049504698925 ['ENSG00000112695|ENST00000684430|COX7A2'] 117174 21392 TVLEQVLPI True PC9_epitope_Rep4 1010.6011973515798 1010.60010993586 90.453 2 0.11196081852345223 0.0014449375580555268 0.007234500837554311 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 99345 7264 SHSSVILKM True PC9_epitope_Rep4 1000.5375515492 1000.53644993586 35.252 2 0.11196062848842414 0.0014449375580555268 0.007234532085259446 ['ENSG00000129315|ENST00000261900|CCNT1'] 48175 24194 IYPPLLGALSF True PC9_epitope_Rep1 1189.6746966450098 1189.67358993586 97.877 2 0.11195980051209563 0.0014449375580555268 0.007234668232002216 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 114993 9771 TRADTTTIL True PC9_epitope_Rep1 990.53457434374 990.53346993586 42.445 2 0.11195762500120934 0.0014449375580555268 0.007235025969902145 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 130657 9169 VSTEVDARL True PC9_epitope_Rep4 988.5189242795998 988.51782993586 42.862 2 0.11195750789022825 0.0014449375580555268 0.007235045227950416 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 92804 18411 RPALPVSYLQA True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 75.838 2 0.11195557599627115 0.0014449375580555268 0.0072353629210123015 ['ENSG00000167615|ENST00000326764|LENG8'] 2079 9044 AELEGLVRA True NCI_RA007_Epitope_Rep3 956.5290950404799 956.52798993586 42.669 2 0.11195181653393521 0.0014449375580555268 0.007235981189896978 ['nc|ENSG00000073969|P46459-2|NSF', 'ENSG00000073969|ENST00000398238|NSF'] 127149 8268 VLTVINQTQK True PC9_epitope_Rep2 1142.66592286646 1142.66482993586 37.162 2 0.11195033371157698 0.0014449375580555268 0.007236225064085386 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 7329 11149 ARPPGYEF True PC9_epitope_Rep3 935.45011644379 935.44900993586 47.884 2 0.11194603934421522 0.0014449375580555268 0.007236931387365813 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 105411 15037 SRSPEYLSL True PC9_epitope_Rep5 1050.53457434374 1050.53346993586 62.844 2 0.11194224240076682 0.0014449375580555268 0.007237555951633347 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 85841 6159 QHEGGVQEL True PC9_epitope_Rep5 995.46722305991 995.46612993586 28.675 2 0.11194100159566536 0.0014449375580555268 0.007237760064628833 ['ENSG00000090273|ENST00000321265|NUDC'] 24293 15171 EYTRALFLL True NCI_RA007_Epitope_Rep3 1124.62299542532 1124.62188993586 67.195 2 0.11193209444385085 0.0014449375580555268 0.007239225458764416 ['ENSG00000129933|ENST00000262815|MAU2'] 39229 18989 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 77.827 2 0.11192901901256648 0.0014449375580555268 0.007239731491833953 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 62919 8321 LLPDDPYEK True H1975_Epitope_Rep1 1088.5389910178399 1088.5378899358602 36.938 2 0.1119242112804881 0.0014449375580555268 0.007240522627220772 ['nc|ENSG00000148834|P78417-2|GSTO1', 'nc|ENSG00000148834|P78417-3|GSTO1', 'ENSG00000148834|ENST00000369713|GSTO1'] 6373 5821 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 29.252 2 0.11191257812760352 0.0014449375580555268 0.007242437264788694 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 8208 8638 ATFPLSVQK True NCI_RA007_Epitope_Rep3 989.55458151233 989.55348993586 41.052 2 0.11189694098238331 0.0014449375580555268 0.007245011670314823 ['ENSG00000110367|ENST00000534980|DDX6'] 96019 18724 RYLPDTLLL True PC9_epitope_Rep6 1102.63864548946 1102.63754993586 84.664 2 0.11189434891143227 0.0014449375580555268 0.00724543849890707 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 34817 19159 GQIEVVPEV True PC9_epitope_Rep2 968.5178616504398 968.51676993586 79.068 2 0.11189056922385743 0.0014449375580555268 0.007246060932433694 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 94938 5797 RTIAPIIGR True NCI_RA007_Epitope_Rep3 995.6239984848298 995.62290993586 29.78 2 0.11188957875286548 0.0014449375580555268 0.007246224050338694 ['ENSG00000096401|ENST00000371477|CDC5L', 'CDC5L|p.L387Cfs*9|1|0.66|ENSG00000096401|chr6:44419515-44419515|T/-|frameshift_variant'] 35133 18274 GQWGRAWEV True PC9_epitope_Rep3 1087.51992733911 1087.5188299358601 75.498 2 0.11187534957802692 0.0014449375580555268 0.007248567806011262 ['ENSG00000172893|ENST00000355527|DHCR7'] 110612 17072 TFTFSHATF True PC9_epitope_Rep4 1057.4868958753298 1057.48578993586 73.665 2 0.11187474375742155 0.0014449375580555268 0.007248667609923292 ['ENSG00000204713|ENST00000377199|TRIM27'] 54734 20623 KYMDVQFDF True PC9_epitope_Rep5 1191.52704643515 1191.5259499358601 84.377 2 0.11187405314267429 0.0014449375580555268 0.00724878138458908 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 64831 9654 LQDFFNGK True NCI_RA007_Epitope_Rep2 967.4763311916299 967.4752299358599 42.169 2 0.11187123746866973 0.0014449375580555268 0.007249245268009034 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 107750 5170 SVSNVVITK True NCI_RA007_Epitope_Rep5 945.54949613189 945.54838993586 26.58 2 0.11187075706624887 0.0014449375580555268 0.007249324417371301 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 128089 21740 VPLEFPVVA True PC9_epitope_Rep2 969.5535188831699 969.55297496793 89.1 1 0.1118669772930562 0.0014449375580555268 0.007249947188305327 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 141159 7184 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.41776993586 32.567 2 0.11185778998379148 0.0014449375580555268 0.007251461143097231 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 62137 5325 LLEGEETR True H1975_Epitope_Rep3 945.4767251144499 945.47562993586 25.555 2 0.11184863907744583 0.0014449375580555268 0.007252969403494153 ['ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 64671 7986 LPVGAANFR True H1975_Epitope_Rep1 943.52395009039 943.52284993586 35.668 2 0.1118463917092935 0.0014449375580555268 0.007253339863146759 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 75732 23715 NLLDLLTEV True PC9_epitope_Rep4 1028.57537652656 1028.5748749679299 99.579 1 0.11183704140831101 0.0014449375580555268 0.007254881377999062 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 118896 9292 VADGYPVRL True NCI_RA007_Epitope_Rep3 988.5341804209199 988.53308993586 43.656 2 0.11183525400833323 0.0014449375580555268 0.007255176089510813 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 87335 7794 QPRYPVNSV True PC9_epitope_Rep2 1058.55089311422 1058.5497899358602 35.351 2 0.11183402254763586 0.0014449375580555268 0.007255379142943395 ['ENSG00000120438|ENST00000321394|TCP1'] 11979 17485 DHNYQSYIL True PC9_epitope_Rep2 1151.52473793603 1151.52364993586 72.511 2 0.11180268310097874 0.0014449375580555268 0.007260548502893634 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 101318 22845 SLINVGLISV True PC9_epitope_Rep3 1013.6120963884499 1013.61098993586 93.144 2 0.11179672199894858 0.0014449375580555268 0.007261532174776292 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 71758 6482 MEESTNGSLAA True H1975_Epitope_Rep3 1108.47065375784 1108.4695499358602 29.901 2 0.1117951579421838 0.0014449375580555268 0.007261790289141357 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 125063 11747 VIDSAELQAY True H1975_Epitope_Rep2 1107.54480467427 1107.54427496793 50.26 1 0.11177967422109399 0.0014789846598335283 0.007264346027995212 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 8294 14667 ATIIDILTK True NCI_RA007_Epitope_Rep4 986.60119735158 986.60010993586 63.825 2 0.11177140598267547 0.0014789846598335283 0.007265711137943129 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 97415 11358 SEDYPAALP True H1975_Epitope_Rep3 961.4392769765699 961.43872496793 48.799 1 0.11176565073233173 0.0014789846598335283 0.0072666614929648024 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 69548 13701 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45912496793 57.844 1 0.11176540613617907 0.0014789846598335283 0.007266701885391651 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 6123 14822 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 62.149 2 0.11176475288673109 0.0014789846598335283 0.00726680976358569 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 19562 8237 ELQEIQLK True H1975_Epitope_Rep3 999.56006081559 999.55896993586 36.667 2 0.11176266198396996 0.0014789846598335283 0.007267155067550972 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 35267 19408 GRDLTDYLM True PC9_epitope_Rep2 1082.50664534374 1082.50554993586 80.031 2 0.11175447935784075 0.0014789846598335283 0.007268506547266746 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 141895 7362 YVDSEGHLY True H1975_Epitope_Rep2 1081.47163973401 1081.4705499358602 33.258 2 0.11175159093406412 0.0015070041442613968 0.007268983670580787 ['ENSG00000105974|ENST00000341049|CAV1', 'ENST00000489856.1_1_7:116165116-116166890:+|nuORF'] 21512 6911 ERMAGNEAL True PC9_epitope_Rep3 989.4600295044899 989.4589299358599 31.596 2 0.11174512153763892 0.0015070041442613968 0.0072700524257009675 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 4128 11517 AHSPLAAQL True PC9_epitope_Rep3 906.4923156089401 906.49120993586 49.303 2 0.11174327498240917 0.0015070041442613968 0.007270357507629817 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 115003 9076 TRAGPGTLSV True PC9_epitope_Rep1 957.52434401321 957.52324993586 39.762 2 0.11173694919905455 0.0015070041442613968 0.007271402727235858 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 91029 10194 RFIGATANF True NCI_RA007_Epitope_Rep4 995.51886470995 995.51776993586 46.067 2 0.11173570677093131 0.0015070041442613968 0.0072716080327769215 ['ENSG00000172922|ENST00000308418|RNASEH2C'] 12714 12792 DLEALLNSK True H1975_Epitope_Rep1 1001.53932537101 1001.53822993586 54.268 2 0.11172621088129628 0.0015070041442613968 0.007273177370335488 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 27552 16917 FNDTFVHV True PC9_epitope_Rep3 977.4606811274899 977.45958993586 70.228 2 0.11172355905952377 0.0015070041442613968 0.007273615682060026 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 87356 2609 QPSQPVTSA True PC9_epitope_Rep2 913.4505103666099 913.4499649679301 14.696 1 0.11172344751420069 0.0015070041442613968 0.007273634119614897 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 38914 20882 HHFLELVTL True PC9_epitope_Rep5 1107.60767971435 1107.60658993586 85.375 2 0.1117233456968531 0.0015070041442613968 0.007273650949252279 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 39232 17236 HIIENIVAV True PC9_epitope_Rep2 1006.58113061334 1006.58002993586 71.56 2 0.11172230721489902 0.0015070041442613968 0.0072738226046176226 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 99015 12347 SHDVVVMTV True PC9_epitope_Rep4 985.49026700361 985.48916993586 55.301 2 0.11172225380672135 0.0015070041442613968 0.007273831432802214 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 1141 6426 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 29.694 2 0.11172033634303558 0.0015070041442613968 0.007274148389702486 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 130064 10225 VSDELVQQY True H1975_Epitope_Rep1 1079.51350454599 1079.5124099358602 44.273 2 0.11171955967776266 0.0015070041442613968 0.0072742767763396615 ['ENSG00000108510|ENST00000397786|MED13'] 391 15824 AALDIYETL True NCI_RA007_Epitope_Rep4 1007.51752729727 1007.51642993586 68.725 2 0.11171301455728953 0.0015070041442613968 0.00727535880450923 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 92785 18922 RPAGALVALVV True PC9_epitope_Rep4 1064.67061432408 1064.66950993586 80.87 2 0.11171234258108617 0.0015070041442613968 0.007275469903292082 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 34755 20533 GQFGVGFYSA True PC9_epitope_Rep3 1031.4712458111896 1031.47014993586 84.243 2 0.11170684633614521 0.0015070041442613968 0.007276378666968145 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 21686 5667 ERSGVNSEL True PC9_epitope_Rep5 989.47778774361 989.47668993586 26.795 2 0.11170407622547873 0.0015070041442613968 0.007276836726050239 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 93052 8569 RPNDIM[Oxidation]AEV True PC9_epitope_Rep1 1059.50189469691 1059.5007899358602 37.798 2 0.11170251904136641 0.0015070041442613968 0.007277094230666778 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 62381 18361 LLGPRLVLA True PC9_epitope_Rep4 950.6276868829399 950.62658993586 78.692 2 0.11170162165797605 0.0015070041442613968 0.007277242630977635 ['ENSG00000170348|ENST00000303575|TMED10'] 37802 18202 GYFEYIEENK True PC9_epitope_Rep5 1290.5768330785397 1290.5757299358602 75.024 2 0.11169791536540859 0.0015070041442613968 0.007277855571705299 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'ENST00000366525.8_2_1:245025904-245026177:-|nuORF'] 12129 5949 DIDIHEVR True NCI_RA007_Epitope_Rep3 995.5036085686299 995.50250993586 30.382 2 0.11169761250087276 0.0015070041442613968 0.007277905661166406 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 8519 8827 ATSVITIVK True NCI_RA007_Epitope_Rep2 930.57498260374 930.57388993586 38.984 2 0.11169125318752725 0.0015070041442613968 0.007278957477703557 ['ENSG00000197063|ENST00000357736|MAFG'] 17733 12089 EHQPSVLL True PC9_epitope_Rep5 921.4919812557699 921.49088993586 51.495 2 0.11168484858764266 0.0015070041442613968 0.007280016933301552 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT'] 7512 14676 ASDMLQLEY True H1975_Epitope_Rep2 1068.4797618895598 1068.4786699358601 61.612 2 0.1116838136625679 0.0015070041442613968 0.007280188145700404 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 98984 19952 SHDEVFVVL True PC9_epitope_Rep5 1043.52876068731 1043.52766993586 81.798 2 0.11167833730257806 0.0015070041442613968 0.007281094189938398 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 31592 9249 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep2 933.4113483570098 933.4107949679301 40.533 1 0.11167510191609155 0.0015070041442613968 0.00728162952440482 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 54516 13098 KYIEGVSDF True PC9_epitope_Rep6 1056.51277627 1056.51166993586 61.995 2 0.11167378888005675 0.0015070041442613968 0.007281846793229604 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 141504 20244 YTLDGGDIINA True PC9_epitope_Rep1 1150.5506183307 1150.55007496793 82.695 1 0.11166904965687681 0.0015070041442613968 0.007282631047421412 ['ENSG00000204628|ENST00000512805|RACK1'] 3904 15488 AHDDAIWSV True PC9_epitope_Rep4 1012.46140940348 1012.46030993586 67.503 2 0.11166662296134564 0.0015070041442613968 0.007283032652518259 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 104460 21142 SQLPNFWKL True PC9_epitope_Rep3 1131.60767971435 1131.60658993586 86.608 2 0.1116645863450882 0.0015070041442613968 0.007283369718137644 ['ENSG00000112685|ENST00000230449|EXOC2'] 110951 19475 THADFVLEM True PC9_epitope_Rep5 1061.4851816231699 1061.48408993586 79.963 2 0.11165776173309644 0.0015070041442613968 0.007284499320399796 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 26256 9685 FHEGEAVSV True PC9_epitope_Rep1 973.4505103666098 973.44940993586 42.109 2 0.11165672011253275 0.0015070041442613968 0.007284671743209029 ['ENSG00000156521|ENST00000287078|TYSND1'] 134366 6985 VYPERSTSY True PC9_epitope_Rep3 1100.51383889916 1100.51274993586 31.88 2 0.11165543788570939 0.0015070041442613968 0.007284883999774269 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 87706 15507 QRAAVIGDVI True PC9_epitope_Rep5 1040.5978433066398 1040.59674993586 64.657 2 0.11165181455344815 0.0015070041442613968 0.007285483829346248 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 31382 14564 GDSVIVVLR True PC9_epitope_Rep2 956.5654805492 956.56438993586 61.29 2 0.11164889400454503 0.0015070041442613968 0.0072859673504786235 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 39090 5632 HHTTQQTFL True PC9_epitope_Rep2 1111.54105670651 1111.53994993586 27.048 2 0.11164619500627475 0.0015070041442613968 0.007286414219688445 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 5070 18752 ALLDVFREA True PC9_epitope_Rep6 1032.56039516876 1032.55928993586 84.77 2 0.11163772535114469 0.0015070041442613968 0.007287816700453206 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 18126 13720 EIIRQLNGV True PC9_epitope_Rep1 1040.59784330664 1040.59674993586 57.623 2 0.11163610032973544 0.0015070041442613968 0.007288085815822931 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 100493 22403 SLAQYLINV True PC9_epitope_Rep1 1019.5651461960299 1019.56404993586 90.992 2 0.1116350362574423 0.0015070041442613968 0.0072882620391503455 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 18706 5516 ELALGQDR True NCI_RA007_Epitope_Rep5 900.46649478392 900.46538993586 27.905 2 0.11163195829932127 0.0015070041442613968 0.007288771809718718 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 107093 10367 SVHKGFAFV True PC9_epitope_Rep2 990.5287011176598 990.52760993586 45.202 2 0.11162819981172685 0.0015070041442613968 0.0072893943362055255 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 8591 3793 ATVTPSPVK True NCI_RA007_Epitope_Rep3 898.5123823471799 898.51128993586 21.08 2 0.11162071343345584 0.0015070041442613968 0.00729063447474348 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 43693 9796 IHDNFGIVEG True H1975_Epitope_Rep3 1099.52982331647 1099.5287299358602 42.704 2 0.11161367620444436 0.0015070041442613968 0.007291800396770333 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF', 'ENST00000520713.5_1_8:101563216-101563492:-|nuORF'] 77188 7182 NRSDPVTL True PC9_epitope_Rep4 900.46649478392 900.46538993586 34.927 2 0.11161188201383898 0.0015070041442613968 0.007292097685600683 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 31835 10839 GEISALTAEA True H1975_Epitope_Rep3 960.47639076128 960.47584496793 46.772 1 0.11160868108599437 0.0015070041442613968 0.007292628093229916 ['ENSG00000125968|ENST00000376112|ID1'] 75215 13653 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 57.656 2 0.11160272323349003 0.0015070041442613968 0.007293615434704474 ['ENSG00000116285|ENST00000377482|ERRFI1'] 103577 7047 SPSPPFGHSA True PC9_epitope_Rep2 982.4508447197801 982.44974993586 32.505 2 0.11160116476230855 0.0015070041442613968 0.007293873727514395 ['ENSG00000141232|ENST00000499247|TOB1'] 134200 12541 VYLPTHTSL True PC9_epitope_Rep6 1029.54949613189 1029.54838993586 59.674 2 0.11159689763409886 0.0015070041442613968 0.007294580984203708 ['ENSG00000007944|ENST00000356840|MYLIP'] 130108 6252 VSDPSSPQY True H1975_Epitope_Rep2 978.42944056886 978.4288949679301 29.003 1 0.11159014646852813 0.0015070041442613968 0.007295700094184155 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 104509 18716 SQMPTVIYV True PC9_epitope_Rep6 1036.5263181591597 1036.52577496793 84.633 1 0.11158981372640189 0.0015070041442613968 0.007295755255629694 ['ENSG00000121931|ENST00000369763|LRIF1'] 127167 17349 VLVDAFSHV True PC9_epitope_Rep4 985.5232813840499 985.52218993586 74.736 2 0.11158402344850286 0.0015070041442613968 0.0072967152230857275 ['ENSG00000101413|ENST00000373433|RPRD1B', 'RPRD1B|p.K138Qfs*22|1|0.16|ENSG00000101413|chr20:38048471-38048472|-/C|frameshift_variant'] 45600 10336 IQVTKVTQV True PC9_epitope_Rep5 1014.6073453611799 1014.60624993586 44.741 2 0.11158017211810609 0.0015070041442613968 0.007297353801066857 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 68362 14492 LTEPTGLLY True H1975_Epitope_Rep2 1005.5382627418498 1005.53767496793 60.901 1 0.11157997579199025 0.0015070041442613968 0.007297386354783046 ['ENSG00000168758|ENST00000305476|SEMA4C'] 26219 12081 FHDNSGDVF True PC9_epitope_Rep1 1036.4250238947598 1036.42392993586 51.33 2 0.11157840379498515 0.0015070041442613968 0.0072976470197462905 ['ENSG00000132182|ENST00000254508|NUP210'] 114246 17054 TPMSVLQQA True PC9_epitope_Rep3 973.49026700361 973.48916993586 70.751 2 0.11157439922579727 0.0015070041442613968 0.007298311089022437 ['ENSG00000167978|ENST00000301740|SRRM2'] 98762 10177 SGHLETVILG True H1975_Epitope_Rep3 1024.5553097883198 1024.5542099358602 44.19 2 0.11156466551284558 0.0015070041442613968 0.007299925454086978 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 139539 20860 YLTDLQVSL True PC9_epitope_Rep4 1050.55972646242 1050.5586299358602 88.391 2 0.11156059058069773 0.0015070041442613968 0.007300601396288053 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 110216 9695 TEQPPSPLP True H1975_Epitope_Rep3 964.48656152216 964.48601496793 42.313 1 0.11155750919766023 0.0015070041442613968 0.007301112570637751 ['ENSG00000075568|ENST00000186436|TMEM131'] 9358 11687 AVSDGVIKV True PC9_epitope_Rep1 886.5123823471799 886.51128993586 49.83 2 0.11155412229763036 0.0015070041442613968 0.0073016744675459145 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 121247 13232 VETFAFQA True H1975_Epitope_Rep2 911.4388830537499 911.43833496793 56.025 1 0.11154704869214133 0.0015070041442613968 0.007302848135018653 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 99231 6357 SHMEGVASV True PC9_epitope_Rep2 915.4120166829099 915.41090993586 29.856 2 0.11154564712586776 0.0015070041442613968 0.0073030807075164265 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 42937 8538 IESDPVTPP True H1975_Epitope_Rep3 953.47057710485 953.47002496793 37.829 1 0.11154516110213523 0.0015070041442613968 0.007303161358786675 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant'] 59989 3502 LGIHEDSTNR True NCI_RA007_Epitope_Rep4 1140.5523496662001 1140.5506949037901 19.44 3 0.11154045628575569 0.0015070041442613968 0.007303942125356927 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 128252 17823 VPPAVTGITFL True H1975_Epitope_Rep3 1113.64339651673 1113.6422899358602 74.571 2 0.1115360428846519 0.0015070041442613968 0.007304674604878324 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 142585 17253 YYLSKIEEL True PC9_epitope_Rep6 1156.6015912743999 1156.6004899358602 78.963 2 0.11153263253717566 0.0015070041442613968 0.007305240659175131 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 32735 16219 GHAEVVNLL True PC9_epitope_Rep5 950.5185303567799 950.51742993586 67.378 2 0.11153016114606647 0.0015070041442613968 0.007305650890704472 ['ENSG00000107854|ENST00000371627|TNKS2'] 88986 20059 QVIPQFQTV True PC9_epitope_Rep3 1058.5760452328998 1058.57494993586 82.406 2 0.11152800690016856 0.0015070041442613968 0.007306008496811017 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 38342 7283 HEIEGTGLP True H1975_Epitope_Rep2 951.4661604307499 951.46506993586 32.952 2 0.11152362683393233 0.0015070041442613968 0.007306735642682152 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 115424 19139 TRLPTPVLL True PC9_epitope_Rep2 1008.6331661861999 1008.63206993586 78.988 2 0.1115204300091071 0.0015070041442613968 0.007307266399884254 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 132692 4633 VVGVGMTK True NCI_RA007_Epitope_Rep5 789.44186025921 789.44076993586 24.499 2 0.11150276120881322 0.0015070041442613968 0.0073102005598629635 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 62078 7291 LLDVRDRDSY True H1975_Epitope_Rep2 1250.62551460646 1250.62440993586 32.983 2 0.11150243978973245 0.0015070041442613968 0.007310253946714684 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 62060 10053 LLDTHRGLLY True H1975_Epitope_Rep2 1199.6662572196299 1199.6646149037902 43.66 3 0.11150129437738646 0.0015070041442613968 0.0073104441997184685 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 116322 17125 TTEFLYNLY True H1975_Epitope_Rep1 1162.5546410819798 1162.5540749679299 71.307 1 0.111493477165423 0.0015070041442613968 0.007311742766714924 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF', 'ENST00000474114.5_1_21:45744937-45745285:+|nuORF', 'ENST00000495274.1_1_21:45742848-45745285:+|nuORF'] 90454 10407 REIWNQISA True NCI_RA007_Epitope_Rep4 1115.57235683479 1115.5712499358601 46.883 2 0.11148012812162432 0.0015070041442613968 0.007313960777897056 ['ENSG00000197872|ENST00000381323|CYRIA'] 114796 19189 TQLGPPYHIL True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 79.028 2 0.1114796598232822 0.0015070041442613968 0.007314038599861414 ['ENSG00000119616|ENST00000341162|FCF1'] 28360 13763 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62208490379 57.784 3 0.11147661060994603 0.0015070041442613968 0.007314545338686469 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 40295 10075 HQNQLLSSL True NCI_RA007_Epitope_Rep4 1038.5458077337798 1038.54470993586 45.598 2 0.11147477263147611 0.0015070041442613968 0.007314850802755109 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 54642 14478 KYLINLETL True NCI_RA007_Epitope_Rep4 1105.63831113629 1105.63720993586 63.041 2 0.11147364032212487 0.0015070041442613968 0.007315038993817201 ['ENSG00000096968|ENST00000381652|JAK2'] 125282 14844 VILPTVHEV True PC9_epitope_Rep4 1005.5858816406101 1005.58478993586 65.037 2 0.111472021417641 0.0015070041442613968 0.007315308065667882 ['ENSG00000174839|ENST00000311128|DENND6A', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 73899 20696 NAVVELVTV True PC9_epitope_Rep5 942.5385970950199 942.5380449679301 84.663 1 0.1114663096838278 0.0015070041442613968 0.0073162574673850175 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 104788 19889 SQYGEIVNI True PC9_epitope_Rep1 1021.5080252427299 1021.5074749679301 81.321 1 0.11145923856161555 0.0015070041442613968 0.007317432991250617 ['ENSG00000134597|ENST00000305536|RBMX2'] 76031 23122 NMAELFAVV True PC9_epitope_Rep5 992.5001034113199 992.49900993586 93.926 2 0.11145881993311597 0.0015070041442613968 0.007317502590999149 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 76702 16475 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53911496793 68.197 1 0.11145802938367398 0.0015070041442613968 0.007317634026804658 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 134192 10193 VYLPTHTSL True NCI_RA007_Epitope_Rep2 1029.54949613189 1029.54838993586 44.236 2 0.11145602826598336 0.0015070041442613968 0.007317966740455179 ['ENSG00000007944|ENST00000356840|MYLIP'] 24592 21926 FAIDPHLLL True PC9_epitope_Rep5 1037.59096702105 1037.5898699358602 89.38 2 0.11145272570300886 0.0015070041442613968 0.00731851586951482 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 85067 9525 QEISHLIEP True NCI_RA007_Epitope_Rep5 1064.55022440788 1064.54912993586 43.274 2 0.11144938852956995 0.0015070041442613968 0.007319070793900342 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 128866 9935 VQDNPRALV True PC9_epitope_Rep5 1010.5508931142199 1010.54978993586 43.188 2 0.11144832775383219 0.0015070041442613968 0.00731924719432016 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89'] 109168 19643 TAM[Oxidation]DVVYAL True PC9_epitope_Rep5 997.4790339940099 997.47792993586 80.611 2 0.11144599065054316 0.0015070041442613968 0.007319635854611313 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 38842 6367 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 29.516 2 0.11144396200970491 0.0015070041442613968 0.007319973233792685 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 96226 18270 RYPTSIASLAF True PC9_epitope_Rep6 1224.65027280232 1224.64916993586 82.915 2 0.11144359270164454 0.0015070041442613968 0.007320034654293786 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 108589 18066 SYPDLLPTF True NCI_RA007_Epitope_Rep3 1051.52261267771 1051.5215099358602 79.159 2 0.11144285972796249 0.0015070041442613968 0.007320156558366329 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 141351 5324 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.46057496793 25.532 1 0.11143608068155204 0.0015070041442613968 0.0073212841044959925 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 77367 12087 NSELSCQLY True H1975_Epitope_Rep1 1055.4593607981499 1055.45877496793 51.506 1 0.1114328165327915 0.0015070041442613968 0.007321827084230039 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 105180 15226 SRGDFVVEY True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 63.714 2 0.1114294385612232 0.0015070041442613968 0.007322389039036006 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 84970 6271 QEEPQSLQA True H1975_Epitope_Rep3 1028.4774533904397 1028.47634993586 29.129 2 0.11142773103810169 0.0015070041442613968 0.007322673116172064 ['nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-13|PML', 'nc|ENSG00000140464|P29590-11|PML', 'ENST00000569161.1_1_15:74315283-74324931:+|nuORF', 'ENST00000564725.1_1_15:74290377-74317280:+|nuORF'] 17673 16510 EHLQVITTL True PC9_epitope_Rep2 1052.5866099166 1052.58550993586 68.748 2 0.11141991683567416 0.0015070041442613968 0.007323973285213034 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 109940 7395 TEGGTVLTA True H1975_Epitope_Rep2 847.4287122928699 847.42816496793 33.387 1 0.11140542254617614 0.0015070041442613968 0.007326385514786312 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 93042 15195 RPLLPSENITA True PC9_epitope_Rep5 1209.6717365228901 1209.67062993586 63.454 2 0.11140518892585569 0.0015070041442613968 0.007326424401626641 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 98615 11043 SFVLNLGK True H1975_Epitope_Rep3 876.5069030439199 876.50580993586 47.566 2 0.11140376563565944 0.0015070041442613968 0.007326661317092478 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 75015 8835 NHSDYNM[Oxidation]VL True PC9_epitope_Rep2 1107.46550918819 1107.4644099358602 39.335 2 0.11140153242977054 0.0015070041442613968 0.007327033062987293 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 75526 19295 NKTDVVLIL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 79.023 2 0.11140097271234434 0.0015070041442613968 0.007327126238026345 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3', 'DAPK3|p.E84K|1|0.14|ENSG00000167657|chr19:3964804-3964804|C/T|missense_variant'] 8727 20971 AVATDFFTV True PC9_epitope_Rep4 969.48074786573 969.47964993586 88.827 2 0.11139930190893606 0.0015070041442613968 0.007327404380145931 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 12103 9311 DIAFAYQR True H1975_Epitope_Rep1 982.4872302285 982.48612993586 40.721 2 0.11139862108396274 0.0015070041442613968 0.0073275177214266515 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 44332 20736 ILDPHVVLL True PC9_epitope_Rep1 1017.6222671493299 1017.6211699358599 84.588 2 0.11139779937950206 0.0015070041442613968 0.007327654518075403 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 140934 11412 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.50207496793 48.876 1 0.11139134062443723 0.0015070041442613968 0.007328729852126124 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 74737 7119 NHANGLTL True PC9_epitope_Rep4 838.4297153523801 838.42860993586 34.656 2 0.11138637821841721 0.0015070041442613968 0.007329556159105415 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 54981 15553 KYQEVTNNLEF True PC9_epitope_Rep2 1383.6670450652698 1383.66594993586 65.097 2 0.11137451420869174 0.0015070041442613968 0.007331532040976774 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 8393 7318 ATLQEALAH True NCI_RA007_Epitope_Rep3 952.4977949121999 952.49668993586 35.906 2 0.11137021981560151 0.0015070041442613968 0.007332247374274654 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 104994 16348 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.59957490379 68.015 3 0.11136578804908907 0.0015070041442613968 0.007332985661219571 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 112396 15617 TLAVAAGLYY True H1975_Epitope_Rep2 1040.55424715916 1040.5531499358601 65.227 2 0.11136411428129325 0.0015070041442613968 0.00733326451252454 ['ENST00000489894.5_1_2:71216836-71221917:-|nuORF', 'ENSG00000144043|ENST00000272438|TEX261'] 99865 13323 SILPAIFQK True NCI_RA007_Epitope_Rep3 1015.6066170851899 1015.60552993586 59.674 2 0.11136007877884936 0.0015070041442613968 0.00733393687327379 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 126289 6120 VLIAAHGNSLR True PC9_epitope_Rep4 1149.66184054553 1149.66019490379 30.551 3 0.111356863882085 0.0015070041442613968 0.007334472554458745 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 1407 6055 AEEEPSTSATV True H1975_Epitope_Rep3 1119.49316302423 1119.4920699358602 28.305 2 0.11134510234569772 0.0015070041442613968 0.007336432639597635 ['ENSG00000100023|ENST00000398831|PPIL2', 'ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 85757 15510 QHDFTSQIF True PC9_epitope_Rep6 1121.51417325233 1121.5130699358601 71.837 2 0.11134394686468288 0.0015070041442613968 0.007336625230325576 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 43182 20752 IFGVTTLDIVR True PC9_epitope_Rep2 1232.71287305888 1232.71176993586 85.263 2 0.1113423381266464 0.0015070041442613968 0.0073368933761821156 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 76344 14635 NPVDILTY True H1975_Epitope_Rep1 933.4807478657301 933.4801949679301 61.503 1 0.11132155590878293 0.0015070041442613968 0.0073403582272989 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 60976 13541 LIDVGTGYY True H1975_Epitope_Rep2 999.49131254943 999.4907749679301 57.222 1 0.1113183846044249 0.0015070041442613968 0.007340887092492635 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 48116 12781 IYNQVKQII True PC9_epitope_Rep6 1117.64954452633 1117.64844993586 60.656 2 0.1113137821857269 0.0015070041442613968 0.007341654684257104 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 47938 13775 IYIKQIKTF True PC9_epitope_Rep5 1152.6906810623198 1152.6890249037901 58.005 3 0.11130914079212917 0.0015070041442613968 0.007342428854936564 ['ENSG00000103479|ENST00000262133|RBL2'] 60794 14945 LHSLGSVSL True PC9_epitope_Rep5 911.50763131991 911.50652993586 62.488 2 0.1113087150452043 0.0015070041442613968 0.007342499872216661 ['ENSG00000131746|ENST00000254051|TNS4'] 133737 9345 VYDTNPAKF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 46.13 2 0.11130754039230692 0.0015070041442613968 0.007342695815197894 ['ENSG00000139433|ENST00000318348|GLTP'] 4167 14959 AHTPVIISV True PC9_epitope_Rep5 935.54401682863 935.54290993586 62.542 2 0.11130222404988234 0.0015070041442613968 0.007343582693638167 ['ENSG00000182993|ENST00000330828|C12orf60'] 87727 14855 QRALLANAL True PC9_epitope_Rep3 968.5767139392399 968.57560993586 62.276 2 0.11129623452901982 0.0015070041442613968 0.007344581996699272 ['ENSG00000109133|ENST00000504986|TMEM33'] 73159 8451 MRSPQMVSA True PC9_epitope_Rep3 1005.47357139365 1005.47246993586 37.471 2 0.11129165994596996 0.0015395668685209895 0.007345345317494535 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 115399 19916 TRLEMYNIL True PC9_epitope_Rep2 1151.6008800817501 1151.5997899358601 82.002 2 0.11128767958627113 0.0015395668685209895 0.00734600954789141 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 76482 8571 NQIDHEVTV True PC9_epitope_Rep2 1053.50908787189 1053.50798993586 38.329 2 0.11128687171479446 0.0015395668685209895 0.00734614437013913 ['ENSG00000112159|ENST00000369393|MDN1'] 1100 5061 AEALPVSHGA True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 24.549 2 0.11128650632220996 0.0015395668685209895 0.007346205349745938 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000542958.5_1_12:64816967-64819028:+|nuORF'] 16362 5625 EEILAQAK True NCI_RA007_Epitope_Rep2 900.4916469026 900.49054993586 26.494 2 0.1112863686262986 0.0015395668685209895 0.007346228329656666 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 4508 10009 AKEFTNVYIK True PC9_epitope_Rep5 1211.6550238295897 1211.6533649037901 43.477 3 0.11128612143377346 0.0015395668685209895 0.007346269583504692 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 87732 10802 QRALPSEEL True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 46.437 2 0.11128300603581683 0.0015395668685209895 0.007346789530073614 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 84886 6563 QEARPPLVSA True H1975_Epitope_Rep2 1066.5771078620598 1066.5760099358602 30.155 2 0.11128077762555923 0.0015395668685209895 0.0073471614640473245 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 142668 21580 YYPNPPLVL True PC9_epitope_Rep5 1074.57498260374 1074.57447496793 88.048 1 0.11128066261509982 0.0015395668685209895 0.007347180660422467 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 83283 17067 PTDAFTVFY True H1975_Epitope_Rep2 1059.49131254943 1059.49020993586 70.911 2 0.11127194563604344 0.0015395668685209895 0.0073486357511177176 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 104036 4618 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 22.635 2 0.11126035638656386 0.0015395668685209895 0.007350570730439726 ['ENSG00000130935|ENST00000253247|NOL11'] 140002 20901 YQDPVTLQL True PC9_epitope_Rep5 1075.55497543515 1075.55447496793 85.45 1 0.11125785696234827 0.0015395668685209895 0.007350988107192456 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 74814 9274 NHDTGEYVL True PC9_epitope_Rep6 1046.46688870674 1046.4657899358601 45.826 2 0.1112520374481093 0.0015395668685209895 0.007351959991873977 ['ENSG00000144597|ENST00000396842|EAF1'] 8029 4115 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 20.92 2 0.1112476767216314 0.0015395668685209895 0.007352688334041041 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 21653 17950 ERSDTFINL True PC9_epitope_Rep1 1093.54038800017 1093.53928993586 73.835 2 0.11123614350731588 0.0015395668685209895 0.00735461498416572 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 9875 13180 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 55.702 2 0.11123218743093724 0.0015395668685209895 0.0073552759684153155 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 84929 15360 QEEDFVLQV True H1975_Epitope_Rep1 1105.5291546101298 1105.52857496793 64.352 1 0.11122597653355336 0.0015395668685209895 0.007356313805864264 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 10144 6515 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep1 1119.5171508382302 1119.51604993586 29.357 2 0.11121890345160813 0.0015395668685209895 0.007357495886477192 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 104163 22492 SQFLGYPITL True PC9_epitope_Rep1 1137.60701100801 1137.6059099358602 91.315 2 0.11121557480541519 0.0015395668685209895 0.00735805224622366 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 38764 8364 HGSLGFLPR True NCI_RA007_Epitope_Rep4 982.53484912726 982.53374993586 38.987 2 0.11121290343609788 0.0015395668685209895 0.007358498776224904 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000484615.5_1_22:39713464-39715605:-|nuORF', 'ENST00000460589.5_1_22:39713464-39715412:-|nuORF', 'ENST00000465618.5_1_22:39712851-39715803:-|nuORF'] 65836 12687 LSDLGISSY True H1975_Epitope_Rep2 953.47057710485 953.46948993586 53.901 2 0.1112101398331951 0.0015395668685209895 0.007358960751037022 ['ENSG00000165029|ENST00000374736|ABCA1'] 97677 6113 SEHVSPISC True H1975_Epitope_Rep2 957.42258136661 957.42148993586 28.492 2 0.11120389227016578 0.0015395668685209895 0.007360005221888248 ['ENST00000301732.9_1_16:2376069-2378689:-|nuORF'] 134719 20487 VYTPVDSLVF True PC9_epitope_Rep6 1138.5910265906998 1138.58992993586 91.525 2 0.11120265359618714 0.0015395668685209895 0.0073602123210934 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 71853 15262 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51487496793 63.864 1 0.11120217078695914 0.0015395668685209895 0.007360293045562693 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 6324 9483 APRPTIINA True PC9_epitope_Rep1 951.5501648382299 951.54906993586 41.333 2 0.1111985765020499 0.0015395668685209895 0.007360894027750223 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 36902 20394 GVLPNIQAV True PC9_epitope_Rep3 909.5283667644899 909.52726993586 83.696 2 0.11119261519262472 0.0015395668685209895 0.0073618908928333015 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 31331 12144 GDLPFVVPR True H1975_Epitope_Rep1 998.5549158654999 998.55380993586 51.728 2 0.11119046432761806 0.0015395668685209895 0.007362250597937776 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 1659 9062 AEFVEVTK True PC9_epitope_Rep3 921.4807478657299 921.47964993586 39.799 2 0.11118832361925088 0.0015395668685209895 0.007362608621361487 ['CON__P02769'] 7928 7222 ATAPPAPAY True NCI_RA007_Epitope_Rep4 857.42831837005 857.4272299358599 34.413 2 0.11118112969149563 0.0015395668685209895 0.007363811895465817 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 28013 9265 FQNALLVR True NCI_RA007_Epitope_Rep4 959.5552502186699 959.55414993586 42.49 2 0.11117942997799715 0.0015395668685209895 0.007364096221533536 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 65308 21527 LRDAVLLVF True PC9_epitope_Rep5 1044.6331661861998 1044.63206993586 87.84 2 0.11117123016647192 0.0015395668685209895 0.007365468025597084 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 40237 21727 HQILTPFLL True PC9_epitope_Rep1 1080.6331661862 1080.63206993586 88.404 2 0.11116047218112649 0.0015395668685209895 0.007367268179616803 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 96946 7528 SAVTSVAKV True PC9_epitope_Rep1 860.4967322830399 860.49562993586 33.774 2 0.11115303254136201 0.0015718972115910334 0.007368513317634049 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 141813 21684 YVDDGLISL True PC9_epitope_Rep5 993.5018772331299 993.50132496793 88.455 1 0.1111382556433183 0.0015718972115910334 0.007370987062572504 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 4702 15038 ALATLIHQV True PC9_epitope_Rep4 964.5705659296401 964.56946993586 65.775 2 0.11113190352712689 0.0015718972115910334 0.007372050693445181 ['ENSG00000111652|ENST00000543155|COPS7A'] 103700 5410 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 27.54 2 0.11112750080936458 0.0015718972115910334 0.007372787994210735 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 31417 8829 GEAEAAVIEA True H1975_Epitope_Rep2 958.4607406971398 958.4601949679301 38.928 1 0.11112635740592042 0.0015718972115910334 0.007372979485846592 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 27799 20225 FQDDNNLYL True PC9_epitope_Rep1 1140.50875351872 1140.5076499358602 82.625 2 0.11112000318530925 0.0015718972115910334 0.007374043747445057 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 35115 8154 GQVTEAVKV True PC9_epitope_Rep5 929.5181960036099 929.51708993586 36.303 2 0.11111639546289118 0.0015718972115910334 0.007374648067170477 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 17515 13655 EHFPQAYSV True PC9_epitope_Rep5 1076.49270953176 1076.4916099358602 57.547 2 0.11111159915215887 0.0015718972115910334 0.007375451558291726 ['ENSG00000076201|ENST00000265562|PTPN23'] 95195 14065 RVIGDLDTV True PC9_epitope_Rep5 986.53965972418 986.53856993586 59.115 2 0.11110561589696119 0.0015718972115910334 0.007376454008364989 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF'] 68104 5687 LTDPDGALAK True H1975_Epitope_Rep2 999.5236753068699 999.52256993586 26.873 2 0.11110405502608746 0.0015718972115910334 0.007376715542398532 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 109909 14180 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.4481749679301 59.696 1 0.11110102188371736 0.0015718972115910334 0.007377223790727522 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 90755 3476 RERRDNYVP True NCI_RA007_Epitope_Rep4 1203.6108676018298 1203.60922490379 19.315 3 0.11110053675942573 0.0015718972115910334 0.007377305083695304 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 111070 13528 THDITTISI True PC9_epitope_Rep6 999.52367530687 999.52256993586 63.764 2 0.11109878994901144 0.0015718972115910334 0.007377597806382411 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 29401 11401 FVDPSQDHAL True PC9_epitope_Rep4 1127.52473793603 1127.52364993586 51.624 2 0.11107857059726069 0.0015718972115910334 0.00738098689316863 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 103843 7907 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 35.779 2 0.1110770506317242 0.0015718972115910334 0.007381241724582633 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 63258 10955 LLSNDEVTIK True PC9_epitope_Rep4 1130.6183039677 1130.61720993586 49.908 2 0.11107643346477711 0.0015718972115910334 0.00738134519878392 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 115835 9290 TSDTLNNVGY True H1975_Epitope_Rep3 1082.48801807414 1082.4869299358602 40.728 2 0.11107587574383172 0.0015718972115910334 0.007381438707476832 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 17409 12774 EHDPSSIYL True PC9_epitope_Rep4 1059.48728979815 1059.48618993586 56.998 2 0.11107090047656619 0.0015718972115910334 0.007382272922211196 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'HEATR5B|p.G877Wfs*15|1|0.44|ENSG00000008869|chr2:37049720-37049721|-/A|frameshift_variant', 'HEATR5B|p.R763C|1|0.1|ENSG00000008869|chr2:37056552-37056552|G/A|missense_variant', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 84892 10476 QEASEAYLV True H1975_Epitope_Rep2 1008.4763907612797 1008.47587496793 45.314 1 0.11107013412591764 0.0015718972115910334 0.007382401426130803 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 142563 21441 YYLNEIQSF True PC9_epitope_Rep1 1175.5498900547097 1175.54937496793 87.311 1 0.11106900259851882 0.0015718972115910334 0.007382591167914263 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 64755 13509 LQADPSVSV True PC9_epitope_Rep5 914.47091145802 914.46980993586 56.982 2 0.11106894300149939 0.0015718972115910334 0.007382601161656171 ['ENSG00000119686|ENST00000238667|FLVCR2'] 87808 6013 QREAEQSNVAL True PC9_epitope_Rep2 1243.61567819875 1243.61458993586 28.52 2 0.11106832284952191 0.0015718972115910334 0.007382705154861981 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 106321 5444 STFSTNYR True NCI_RA007_Epitope_Rep5 974.4457593393399 974.44466993586 27.628 2 0.1110676853898246 0.0015718972115910334 0.007382812051874569 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 85713 8364 QHADPPVQI True PC9_epitope_Rep6 1003.50869394907 1003.50758993586 41.828 2 0.111066357841469 0.0015718972115910334 0.007383034676173154 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 68067 17283 LTDLVDDNYFY True H1975_Epitope_Rep1 1376.6136125100802 1376.6130749679298 71.94 1 0.11106270315293895 0.0015718972115910334 0.007383647585690726 ['ENSG00000174231|ENST00000304992|PRPF8'] 40087 9973 HPVLLTEA True PC9_epitope_Rep2 878.4861675993401 878.48561496793 43.69 1 0.11106243625146058 0.0015718972115910334 0.007383692348330681 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 34976 22359 GQSELTLLL True PC9_epitope_Rep1 972.54916177872 972.54806993586 90.821 2 0.1110522246195198 0.0015718972115910334 0.007385405161050402 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 28097 19455 FQVRDIENL True PC9_epitope_Rep1 1132.58767254576 1132.58656993586 79.65 2 0.11105105566184319 0.0015718972115910334 0.0073856012566421774 ['ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-5|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2'] 88246 7109 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.44387496793 32.276 1 0.11105059525461507 0.0015718972115910334 0.007385678492496255 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 116246 19850 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.54357496793 82.336 1 0.11104949863360072 0.0015718972115910334 0.007385862459872966 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 75074 11127 NHVASDISL True PC9_epitope_Rep5 954.47705946762 954.47596993586 47.791 2 0.11104511398924888 0.0015718972115910334 0.0073865980650640786 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 112183 7103 TKFETEQAL True NCI_RA007_Epitope_Rep5 1065.5342399905699 1065.5331499358601 34.002 2 0.11103827867401862 0.0015718972115910334 0.007387744957033248 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 76456 14331 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.52857496793 63.025 1 0.11103739618923943 0.0015718972115910334 0.00738789304099406 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 28122 16751 FRADDTFEAL True PC9_epitope_Rep6 1183.55095268387 1183.54984993586 76.923 2 0.1110285130648655 0.0015718972115910334 0.007389383819595359 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 108553 18112 SYNGKLYVF True PC9_epitope_Rep1 1089.54949613189 1089.54838993586 74.46 2 0.11102586323781417 0.0015718972115910334 0.007389828573714599 ['ENSG00000174010|ENST00000328046|KLHL15'] 49037 8433 KEGEFTLSA True H1975_Epitope_Rep2 980.4814761417199 980.48036993586 37.389 2 0.11100908118622982 0.0015997277059223963 0.007392645920091118 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 21106 19588 ERADLIAYL True PC9_epitope_Rep4 1062.57095985246 1062.5698699358602 83.467 2 0.11100900236120402 0.0015997277059223963 0.007392659155573705 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 434 19720 AALPNVYEV True PC9_epitope_Rep2 974.5072969667399 974.50618993586 81.243 2 0.1110066529876075 0.0015997277059223963 0.0073930536486011295 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 39971 11398 HPLLGVSA True PC9_epitope_Rep3 792.4493881678001 792.4488349679301 48.846 1 0.11100305688252789 0.0015997277059223963 0.007393657524916036 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 74826 9135 NHDYSYTV True PC9_epitope_Rep5 997.4141248578901 997.41302993586 40.083 2 0.11100300507778287 0.0015997277059223963 0.0073936662245819035 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 96108 10328 RYMPQNPHII True PC9_epitope_Rep4 1267.6495616096697 1267.64791490379 47.417 3 0.11100048728361353 0.0015997277059223963 0.007394089054314826 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 104505 19858 SQMPTVIYV True PC9_epitope_Rep4 1036.5263181591597 1036.52577496793 84.514 1 0.11099267177729995 0.0015997277059223963 0.0073954017127354 ['ENSG00000121931|ENST00000369763|LRIF1'] 23831 17255 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.66355490379 74.378 3 0.1109891989097491 0.0015997277059223963 0.007395985072810578 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 127652 10180 VPAGGAVAV True PC9_epitope_Rep3 739.42283906679 739.42229496793 44.109 1 0.1109866650556274 0.0015997277059223963 0.0073964107288079246 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 115787 9087 TSDETTLEY True H1975_Epitope_Rep3 1057.44515020265 1057.4445749679298 39.941 1 0.11098370432667362 0.0015997277059223963 0.007396908124502066 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 16160 8707 EEDIRDLAA True H1975_Epitope_Rep2 1030.4931034545798 1030.49200993586 38.452 2 0.11097738649636373 0.0015997277059223963 0.0073979696137703955 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 1387 7022 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4596499358599 31.935 2 0.11097525174036213 0.0015997277059223963 0.007398328317780237 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 111412 16035 THSLPVVVI True PC9_epitope_Rep6 963.5753169569099 963.57420993586 74.002 2 0.11097130008965438 0.0015997277059223963 0.007398992359833587 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 91800 7158 RKHWIANNL True NCI_RA007_Epitope_Rep4 1150.63596015086 1150.63432490379 34.156 3 0.11097060248433165 0.0015997277059223963 0.007399109592598211 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000464173.5_1_20:30136866-30137929:+|nuORF', 'ENST00000483310.5_1_20:30136863-30150236:+|nuORF', 'ENST00000472128.5_1_20:30136905-30155443:+|nuORF', 'ENST00000492709.5_1_20:30132820-30157019:+|nuORF', 'ENST00000460389.5_1_20:30136650-30157019:+|nuORF'] 115339 17206 TRIGLINDM True PC9_epitope_Rep3 1031.54336520563 1031.54226993586 71.339 2 0.11096924970543798 0.0015997277059223963 0.00739933693258202 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 76686 20607 NQSELAVLL True PC9_epitope_Rep4 985.5444107514498 985.5438649679301 87.418 1 0.11096520179639552 0.0015997277059223963 0.0074000172404980625 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 52840 12097 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 51.572 2 0.11096435034732184 0.0015997277059223963 0.007400160346166601 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 134047 14267 VYKAFVDNY True PC9_epitope_Rep5 1117.54441075145 1117.5433099358602 59.881 2 0.1109630983300617 0.0015997277059223963 0.007400370781427952 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 68951 6439 LTPEELER True NCI_RA007_Epitope_Rep4 985.5080252427299 985.50692993586 31.368 2 0.11095865571329391 0.0015997277059223963 0.007401117529697177 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 24799 7067 FATHAAALSVR True PC9_epitope_Rep4 1142.6196413803798 1142.61799490379 34.449 3 0.11095676364752598 0.0015997277059223963 0.007401435584407087 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 7991 18921 ATDIFSYL True H1975_Epitope_Rep2 928.4541987647201 928.4536549679301 78.548 1 0.11095432725579295 0.0015997277059223963 0.007401845159346662 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'ENST00000554574.1_1_14:91942052-91948315:-|nuORF', 'nc|ENSG00000100796|Q6IN85-5|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A', 'nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B'] 74500 9487 NFGIGQDIQPK True NCI_RA007_Epitope_Rep5 1215.62478633047 1215.62368993586 43.125 2 0.1109541656481479 0.0015997277059223963 0.007401872327527428 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 104945 14914 SRDEYYHLL True PC9_epitope_Rep1 1194.56693710118 1194.5658499358601 62.189 2 0.11095110478127286 0.0015997277059223963 0.007402386914130843 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 93385 13699 RQAPFLVTL True NCI_RA007_Epitope_Rep4 1043.61276509479 1043.6116699358602 59.917 2 0.11094293935376945 0.0015997277059223963 0.007403759838248684 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 1086 9653 AEAIRILAA True H1975_Epitope_Rep2 926.5549158654999 926.55380993586 42.111 2 0.11094018600187502 0.0015997277059223963 0.007404222838717754 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 1655 9011 AEFVEVTK True PC9_epitope_Rep1 921.4807478657299 921.47964993586 39.509 2 0.11093749391815154 0.0015997277059223963 0.007404675563489364 ['CON__P02769'] 35111 7312 GQVTEAVKV True PC9_epitope_Rep2 929.5181960036099 929.51708993586 33.51 2 0.11093263643177524 0.0015997277059223963 0.0074054925094191575 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 21105 20651 ERADLIAYL True PC9_epitope_Rep3 1062.57095985246 1062.5698699358602 84.705 2 0.1109277353904287 0.0015997277059223963 0.007406316868934302 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 138402 5155 YHGNTNPEL True PC9_epitope_Rep4 1043.46722305991 1043.4661299358602 26.512 2 0.11092282326747567 0.0015997277059223963 0.0074071431814762495 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 99346 18702 SHSVFSVTI True PC9_epitope_Rep1 975.50254593947 975.50144993586 76.727 2 0.11090773236277597 0.0015997277059223963 0.0074096823167816815 ['ENSG00000138160|ENST00000260731|KIF11'] 105314 11361 SRPENAIIY True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 48.705 2 0.1109074730129873 0.0015997277059223963 0.007409725961300677 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 103426 7226 SPPPPPPPP True PC9_epitope_Rep6 881.4647038787699 881.46360993586 36.906 2 0.11090687594821759 0.0015997277059223963 0.007409826438922088 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 7570 13302 ASETGFLTY True H1975_Epitope_Rep2 987.4549270407099 987.4543749679301 56.296 1 0.11090394030518477 0.0015997277059223963 0.007410320485621024 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 117228 22372 TVLQELINV True PC9_epitope_Rep2 1027.5913609438699 1027.59026993586 91.546 2 0.1109008898304013 0.0015997277059223963 0.007410833891407929 ['ENSG00000138160|ENST00000260731|KIF11'] 13951 20734 DRDDFPVVL True PC9_epitope_Rep1 1074.53457434374 1074.53346993586 84.58 2 0.11089498963515815 0.0015997277059223963 0.007411827012974004 ['ENSG00000126458|ENST00000246792|RRAS'] 1170 4900 AEAPQLRPA True H1975_Epitope_Rep2 951.5137793295099 951.51268993586 23.931 2 0.11088341473569721 0.0015997277059223963 0.0074137756755375634 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 134845 20334 VYVEKISFL True PC9_epitope_Rep1 1096.6168474157198 1096.61574993586 83.045 2 0.1108783906496494 0.0015997277059223963 0.007414621646944966 ['ENSG00000171017|ENST00000306708|LRRC8E'] 119357 14392 VAPEEHPVLL True PC9_epitope_Rep1 1102.60225998074 1102.60116993586 60.183 2 0.11087231346197134 0.0015997277059223963 0.007415645067731833 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 12075 19231 DHTVGFIL True PC9_epitope_Rep4 900.4705175351999 900.46942993586 82.072 2 0.11087111016153332 0.0015997277059223963 0.007415847724166532 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 31420 11828 GEAEAFAIGA True H1975_Epitope_Rep3 934.4396113297398 934.4390649679301 50.641 1 0.11087044334250089 0.0015997277059223963 0.007415960030237378 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 40178 12616 HQELFPHSL True PC9_epitope_Rep2 1106.55089311422 1106.5497899358602 53.838 2 0.11085644219850718 0.0015997277059223963 0.007418318491547548 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 6152 10205 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 46.931 2 0.11085436994339304 0.0015997277059223963 0.007418667619919953 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 140217 15133 YQVGVHYEL True PC9_epitope_Rep4 1106.5396597241802 1106.53856993586 66.137 2 0.11085323661738057 0.0015997277059223963 0.00741885856658396 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 7245 16428 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.5233099358602 68.433 2 0.11085083171841358 0.0015997277059223963 0.007419263767982817 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 85911 13109 QHGGFVVTV True PC9_epitope_Rep2 942.4923156089399 942.49120993586 55.699 2 0.11084411118413012 0.0015997277059223963 0.007420396224253604 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 48367 18182 IYTFPHSAF True PC9_epitope_Rep4 1081.5232813840498 1081.52218993586 78.004 2 0.11084378740771489 0.0015997277059223963 0.007420450787029856 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 14041 12114 DRLKLQNEL True PC9_epitope_Rep5 1127.62987171091 1127.6287699358602 51.587 2 0.11084312602320068 0.0015997277059223963 0.007420562244702925 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 77067 15371 NRLDSIDPAL True PC9_epitope_Rep4 1112.5825871653199 1112.5814899358602 67.057 2 0.11083760672092374 0.0015997277059223963 0.007421492430318036 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124359502-124368686:-|nuORF', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 126713 16856 VLPGHFNTF True PC9_epitope_Rep3 1030.5236157372199 1030.5225099358602 69.99 2 0.11083309288420606 0.0015997277059223963 0.007422253245470781 ['ENSG00000176055|ENST00000316610|MBLAC2'] 40373 7426 HQSPATPAF True PC9_epitope_Rep4 954.4559301002199 954.45482993586 35.914 2 0.1108322574845234 0.0015997277059223963 0.007422394061838014 ['ENSG00000082516|ENST00000285873|GEMIN5'] 17828 8942 EHTNAIGTL True PC9_epitope_Rep1 954.4770594676199 954.47596993586 39.236 2 0.11082736281420594 0.0015997277059223963 0.007423219167588994 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 3529 14947 AGLQFPVGR True PC9_epitope_Rep3 943.5239500903898 943.52284993586 62.625 2 0.1108212707822608 0.0015997277059223963 0.007424246239280826 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 49463 8860 KEYLQGLEA True H1975_Epitope_Rep2 1049.5393253710097 1049.53822993586 39.048 2 0.11082096079810606 0.0015997277059223963 0.00742429850400058 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000475705.1_1_6:32086681-32087735:-|nuORF'] 98950 6176 SHANSAVVL True PC9_epitope_Rep4 896.47158016436 896.47048993586 30.786 2 0.11081798507450917 0.0015997277059223963 0.007424800242464886 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 93693 16128 RQVAFDFTKV True PC9_epitope_Rep1 1209.65060715549 1209.64897490379 66.853 3 0.1108096159259591 0.0015997277059223963 0.007426211545288471 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 114996 9894 TRADTTTIL True PC9_epitope_Rep3 990.53457434374 990.53346993586 43.013 2 0.11080650244231142 0.0015997277059223963 0.007426736643217285 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 107308 10152 SVLDSTAKV True PC9_epitope_Rep5 918.5022115863 918.50110993586 44.036 2 0.11079754932366642 0.0015997277059223963 0.0074282468124735246 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 16737 8413 EESPVQYAA True H1975_Epitope_Rep2 992.4450906329998 992.44454496793 37.315 1 0.11079128285104459 0.0015997277059223963 0.007429303987855269 ['ENSG00000143653|ENST00000366510|SCCPDH'] 140200 9778 YQVAAAESHPL True PC9_epitope_Rep4 1184.5825871653199 1184.5814899358602 45.251 2 0.11078145041072308 0.0015997277059223963 0.007430963047571468 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 68768 16560 LTLGKLEQV True PC9_epitope_Rep5 999.5964463243098 999.59534993586 68.703 2 0.11077748928129755 0.0015997277059223963 0.007431631523135366 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 6849 18480 AQGGVLPNI True PC9_epitope_Rep2 867.48141657207 867.48030993586 76.417 2 0.11077704990567787 0.0015997277059223963 0.007431705675234819 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 86154 9295 QIDPTIQRV True PC9_epitope_Rep6 1068.5927579262 1068.5916699358602 45.915 2 0.11077597072480369 0.0015997277059223963 0.007431887808377428 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q5XQN5', 'CON__Q922U2'] 65002 19232 LQIAGLEHL True PC9_epitope_Rep2 992.5654805492 992.56438993586 79.35 2 0.11077265187228684 0.0015997277059223963 0.007432447957521182 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 97829 9208 SELPAPPAA True H1975_Epitope_Rep2 851.4388830537499 851.43833496793 40.372 1 0.11077012844293611 0.0015997277059223963 0.007432873884102258 ['ENST00000584717.1_1_17:80059560-80064242:-|nuORF'] 100735 10881 SLDVGGPLRY True H1975_Epitope_Rep3 1075.56620882519 1075.5651099358602 46.936 2 0.11076756311304886 0.0015997277059223963 0.007433306907228787 ['ENSG00000176894|ENST00000317479|PXMP2'] 17325 20077 EHAPSIIFM True PC9_epitope_Rep1 1043.5110024481899 1043.5099099358602 82.054 2 0.11076257092142677 0.0015997277059223963 0.00743414965026295 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 131171 12187 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60617496793 51.896 1 0.11075971543398011 0.0015997277059223963 0.007434631733041195 ['ENSG00000168807|ENST00000336278|SNTB2'] 28938 10333 FTDPGQVAY True H1975_Epitope_Rep3 996.4552613938799 996.45416993586 44.798 2 0.11074788994791002 0.0015997277059223963 0.007436628513874901 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 132181 11282 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 50.289 2 0.11074649591466174 0.0015997277059223963 0.007436863936171707 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 60880 20016 LHYGLPVVV True PC9_epitope_Rep5 995.5804023373499 995.57930993586 82.043 2 0.11074583660081826 0.0015997277059223963 0.007436975282640973 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 38322 9796 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.45990993586 42.669 2 0.11074248413203835 0.0015997277059223963 0.00743754148038649 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 132222 16030 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 69.591 2 0.11073569912658114 0.0015997277059223963 0.007438687526135912 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 11648 10016 DGNASGTTLLE True H1975_Epitope_Rep1 1076.49858275784 1076.49807496793 43.463 1 0.11072863061951135 0.0015997277059223963 0.007439881639437047 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 21380 19200 ERIDGVSLL True PC9_epitope_Rep1 1000.5553097883198 1000.55420993586 78.648 2 0.11072337060264861 0.0015997277059223963 0.007440770357047231 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1'] 124930 15952 VHSEQVFAL True PC9_epitope_Rep1 1028.5290950404797 1028.5279899358602 66.169 2 0.11072036769762875 0.0015997277059223963 0.007441277765457465 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 71735 10949 MEENFAVEA True H1975_Epitope_Rep1 1038.4328116971399 1038.43227496793 47.079 1 0.11071616724184152 0.0015997277059223963 0.007441987583190239 ['ENSG00000026025|ENST00000544301|VIM'] 76463 17042 NQFQGKWYV True PC9_epitope_Rep5 1168.5665431783598 1168.5654499358602 70.57 2 0.11071001861213853 0.0015997277059223963 0.00744302673292889 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2'] 116274 12134 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 51.842 2 0.11070994190039836 0.0015997277059223963 0.007443039698490227 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 118387 15851 TYNYPVHYF True PC9_epitope_Rep6 1202.53965972418 1202.53856993586 73.242 2 0.11070496273983584 0.0015997277059223963 0.007443881306262999 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 57665 14456 LEEESVFAV True H1975_Epitope_Rep2 1021.4967918526899 1021.49568993586 60.761 2 0.11069654682887968 0.0015997277059223963 0.00744530402363457 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 31573 10246 GEELAGAIAA True H1975_Epitope_Rep2 900.4552613938798 900.45416993586 44.417 2 0.11069028151998711 0.0015997277059223963 0.007446363350580315 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 126233 5228 VLGPTPVQK True NCI_RA007_Epitope_Rep4 937.55966689277 937.55856993586 26.647 2 0.11068816010363171 0.0015997277059223963 0.007446722068811076 ['ENSG00000166225|ENST00000549921|FRS2'] 97520 8810 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42760993586 38.813 2 0.11068613335194162 0.0015997277059223963 0.00744706479545364 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 40214 8994 HQGPATTVAF True PC9_epitope_Rep6 1027.50869394907 1027.50758993586 44.618 2 0.11068352154790645 0.0015997277059223963 0.0074475064777954755 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 87888 12457 QRIDEFESM True PC9_epitope_Rep6 1153.5073736197298 1153.50626993586 59.341 2 0.11068304320281482 0.0015997277059223963 0.007447587373508993 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 103944 17894 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51234993586 74.03 2 0.11068247830615868 0.0015997277059223963 0.007447682907554338 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 6964 20677 AQLDPEALGNI True PC9_epitope_Rep1 1139.58225281215 1139.5811499358601 84.357 2 0.1106786359774665 0.0015997277059223963 0.0074483327449506205 ['ENSG00000134690|ENST00000373055|CDCA8'] 104714 17786 SQVDRLVALA True PC9_epitope_Rep5 1070.6084079903399 1070.60730993586 73.431 2 0.11067813792287506 0.0015997277059223963 0.007448416982909925 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 7881 7062 ATAGFTIGR True NCI_RA007_Epitope_Rep3 892.4766655447999 892.47556993586 34.896 2 0.11067524240216782 0.0015997277059223963 0.007448906732128074 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 73832 13569 NALLSLAK True PC9_epitope_Rep1 828.50690304392 828.50580993586 57.049 2 0.11067509908378097 0.0015997277059223963 0.007448930973850947 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 64382 8688 LPLPPPPPRP True H1975_Epitope_Rep1 1079.64915060351 1079.6480499358602 38.349 2 0.1106705977202958 0.0015997277059223963 0.007449692400038164 ['ENST00000372441.1_1_6:43477335-43478064:-|nuORF'] 38604 9693 HEYSGLNIV True NCI_RA007_Epitope_Rep3 1030.5083595958997 1030.5072699358602 45.202 2 0.11066307099520306 0.0015997277059223963 0.0074509657481582605 ['ENSG00000215114|ENST00000399598|UBXN2B'] 78252 11954 NYIDKVRFL True NCI_RA007_Epitope_Rep1 1166.64479349906 1166.64313490379 50.483 3 0.11066288174631769 0.0015997277059223963 0.007450997767413837 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 105641 15455 SSDYSIFDNY True H1975_Epitope_Rep2 1209.4825983405299 1209.48150993586 64.605 2 0.11066035208974867 0.0015997277059223963 0.0074514257759526826 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 73074 14867 MRDSLSQVL True PC9_epitope_Rep2 1047.53827982519 1047.5371899358602 62.448 2 0.11065202733340472 0.0015997277059223963 0.0074528344618696426 ['nc|ENSG00000188428|Q8TDH9-2|BLOC1S5', 'nc|ENSG00000188428|Q8TDH9-3|BLOC1S5', 'ENSG00000188428|ENST00000397457|BLOC1S5'] 31785 14611 GEIENIELP True H1975_Epitope_Rep2 1012.5076908895599 1012.50658993586 61.36 2 0.11065067955249672 0.0015997277059223963 0.007453062552831262 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 1101 4976 AEALPVSHGA True H1975_Epitope_Rep3 950.4821448480601 950.48104993586 24.268 2 0.11064900516736183 0.0015997277059223963 0.007453345925885094 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000542958.5_1_12:64816967-64819028:+|nuORF'] 105680 16552 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.5113499358602 69.164 2 0.11064626953589492 0.0015997277059223963 0.007453808926764177 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 134397 19380 VYPGDPLRF True PC9_epitope_Rep5 1062.5498304850598 1062.5487299358601 79.591 2 0.11064447494347492 0.0015997277059223963 0.007454112673529291 ['ENSG00000170892|ENST00000396388|TSEN34'] 44577 23226 ILPPQLALF True PC9_epitope_Rep5 1010.6164534928998 1010.61534993586 94.322 2 0.11063969351890912 0.0015997277059223963 0.007454922020053553 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 115177 7785 TRDPQFQKL True PC9_epitope_Rep3 1131.6036569630699 1131.60254993586 34.939 2 0.11063954164085087 0.0015997277059223963 0.007454947729679806 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 104954 16064 SRDGMNIVL True PC9_epitope_Rep1 1003.5120650773499 1003.51096993586 66.606 2 0.11063881229362868 0.0015997277059223963 0.0074550711933728106 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 73055 15030 MRDPIRILV True PC9_epitope_Rep6 1111.65358436095 1111.65248993586 69.84 2 0.11063705798291139 0.0015997277059223963 0.00745536817069886 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 90093 5935 REAFEAIKAA True NCI_RA007_Epitope_Rep5 1104.5927579261997 1104.5916699358602 29.514 2 0.11063120352411306 0.0015997277059223963 0.007456359321692078 ['ENSG00000173141|ENST00000309594|MRPL57'] 65892 10140 LSDPGSGLY True H1975_Epitope_Rep1 907.4287122928699 907.42816496793 43.942 1 0.11062533085352853 0.0015997277059223963 0.007457353683968033 ['ENSG00000182108|ENST00000331808|DEXI'] 96161 14385 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65405490379 60.593 3 0.11061081787328 0.0015997277059223963 0.007459811576175169 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 40622 17193 HRLISELL True PC9_epitope_Rep5 979.58146496651 979.58036993586 71.153 2 0.1105993141839021 0.0015997277059223963 0.0074617603770077015 ['nc|ENSG00000154556|O94875-7|SORBS2', 'nc|ENSG00000154556|O94875|SORBS2', 'nc|ENSG00000154556|O94875-11|SORBS2', 'ENSG00000154556|ENST00000695409|SORBS2'] 135138 12356 WEIENNPTV True H1975_Epitope_Rep2 1100.51383889916 1100.51274993586 52.612 2 0.11059137100422019 0.0015997277059223963 0.007463106291418777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 107789 18226 SVTFVAEQV True PC9_epitope_Rep5 978.5022115862997 978.50110993586 75.118 2 0.11059129965020986 0.0015997277059223963 0.007463118382904442 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 73125 17311 MRMLAEDEL True PC9_epitope_Rep3 1106.51001647202 1106.5089099358602 71.763 2 0.11058234261633951 0.0015997277059223963 0.007464636371657201 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 141401 13664 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep2 1147.5107280451098 1147.51017496793 57.698 1 0.11057952148310521 0.0015997277059223963 0.007465114543617007 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 90125 4595 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 24.975 2 0.11057421441171432 0.0015997277059223963 0.007466014153467445 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 102899 10097 SPAPPPPAV True PC9_epitope_Rep5 831.4490538146299 831.44794993586 43.822 2 0.11056988657247588 0.0015997277059223963 0.0074667478497890275 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 3986 15631 AHDVDPIEL True PC9_epitope_Rep3 1007.4923751785899 1007.49126993586 65.271 2 0.11056928835405926 0.0015997277059223963 0.007466849270930201 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 77244 10488 NRYDGIYKV True PC9_epitope_Rep3 1126.5771078620598 1126.5754649037901 45.281 3 0.11055349996202954 0.0015997277059223963 0.007469526495269664 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 25594 15326 FELPQTPLA True H1975_Epitope_Rep1 1014.5385970950199 1014.53807496793 64.22 1 0.1105518911395277 0.0015997277059223963 0.007469799354065835 ['ENSG00000113369|ENST00000265138|ARRDC3'] 120289 10359 VEDLRLINT True H1975_Epitope_Rep2 1071.59242357303 1071.5913299358601 44.854 2 0.11054710919045006 0.0016214572847346553 0.007470610436975916 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000595844.5_1_19:12787852-12790977:-|nuORF'] 77226 10164 NRVGDTITV True PC9_epitope_Rep5 973.5192586327701 973.51816993586 44.083 2 0.11054623929470564 0.0016214572847346553 0.007470757992156659 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 14128 17572 DSDFFTSYY True H1975_Epitope_Rep2 1143.43967089939 1143.4390749679299 72.902 1 0.11053074034717468 0.0016214572847346553 0.007473387457951405 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant'] 134354 12662 VYPEKLATKF True PC9_epitope_Rep3 1194.6648602372995 1194.66322490379 53.729 3 0.11053016849544872 0.0016214572847346553 0.007473484492276413 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 38313 10414 HEGLPGLAV True H1975_Epitope_Rep1 891.4814165720699 891.48030993586 45.009 2 0.1105267660926471 0.0016214572847346553 0.0074740618521966515 ['ENSG00000169710|ENST00000306749|FASN'] 11213 4666 DEDKEKTFEEK True H1975_Epitope_Rep3 1396.6358045066397 1396.63414490379 23.071 3 0.11052226001937003 0.0016214572847346553 0.007474826562369778 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 84203 21895 PYLDSFYEY True PC9_epitope_Rep1 1195.5073565363898 1195.50624993586 89.032 2 0.11052060169393577 0.0016214572847346553 0.007475108010115949 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 113069 5613 TLNQIDSVK True H1975_Epitope_Rep1 1016.5502244078799 1016.54912993586 26.657 2 0.11049508692598896 0.0016214572847346553 0.007479439618825112 ['CON__P12763'] 108421 18791 SYLPFTEAF True NCI_RA007_Epitope_Rep5 1073.5069626135698 1073.5058699358601 79.116 2 0.11049224754015687 0.0016214572847346553 0.007479921807722895 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 26915 20177 FLDGNEMTL True PC9_epitope_Rep4 1038.46919720586 1038.46867496793 85.747 1 0.11048769781918555 0.0016214572847346553 0.007480694511068546 ['ENSG00000169504|ENST00000374379|CLIC4'] 45833 6388 ISDLAQHY True H1975_Epitope_Rep2 945.4555957470502 945.45448993586 29.495 2 0.11048647979892362 0.0016214572847346553 0.007480901387037532 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 98942 19139 SHALVTLTL True PC9_epitope_Rep5 953.5545815123301 953.55348993586 78.653 2 0.11047686658946348 0.0016214572847346553 0.00748253434718222 ['nc|ENSG00000167702|Q96AC6|KIFC2', 'KIFC2|p.S598C|1|0.19|ENSG00000167702|chr8:144472638-144472638|C/G|missense_variant', 'ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2'] 47965 20648 IYIWDLNNF True NCI_RA007_Epitope_Rep5 1196.5866099165999 1196.58550993586 86.378 2 0.11047607722233208 0.0016214572847346553 0.007482668449356811 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 133403 20220 VVVPTLDTV True PC9_epitope_Rep2 941.5433481222899 941.54224993586 83.193 2 0.11047502238131934 0.0016214572847346553 0.007482847655371726 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 60840 19870 LHVGDAILAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 81.666 2 0.11047364329243561 0.0016214572847346553 0.007483081953834239 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC'] 54889 16063 KYPLNLYLL True NCI_RA007_Epitope_Rep4 1135.66413196131 1135.66302993586 69.674 2 0.11047246609576021 0.0016214572847346553 0.007483281957703127 ['ENSG00000155957|ENST00000358230|TMBIM4'] 54997 17740 KYQIINEEF True PC9_epitope_Rep1 1182.5920892198599 1182.59098993586 73.035 2 0.11046875158048607 0.0016214572847346553 0.007483913081917769 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 7327 10036 ARPPGYEF True PC9_epitope_Rep2 935.45011644379 935.44900993586 43.928 2 0.11046301133335074 0.0016214572847346553 0.007484888494531793 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 26249 17900 FHEGDVITL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 74.054 2 0.11046172515281473 0.0016214572847346553 0.007485107065870889 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 32175 6442 GEVPESPEA True H1975_Epitope_Rep3 913.4028914678499 913.40234496793 29.757 1 0.11046137359233589 0.0016214572847346553 0.00748516681053671 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 130123 13529 VSDPVGVLY True H1975_Epitope_Rep3 947.49639792987 947.4958449679301 57.319 1 0.1104564001532456 0.0016214572847346553 0.007486012052953154 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 107015 10448 SVFGTMPLK True NCI_RA007_Epitope_Rep3 978.5208388558999 978.51974993586 48.161 2 0.11045549453217388 0.0016214572847346553 0.007486165974362154 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 31606 8297 GEESPLETAA True H1975_Epitope_Rep2 1002.45056993626 1002.4499749679301 36.865 1 0.11044783230540832 0.0016214572847346553 0.0074874683862895305 ['ENSG00000111817|ENST00000644252|DSE'] 137733 7372 YENEVALR True PC9_epitope_Rep2 992.4927095317598 992.49160993586 33.738 2 0.11044751116898416 0.0016214572847346553 0.0074875229772827295 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 87974 16228 QRMTTQLLL True PC9_epitope_Rep2 1102.6168644990598 1102.61576993586 67.666 2 0.11044383046097614 0.0016214572847346553 0.007488148699932192 ['ENSG00000110195|ENST00000393676|FOLR1'] 99236 6167 SHMEGVASV True PC9_epitope_Rep4 915.4120166829099 915.41090993586 30.751 2 0.11044174476142607 0.0016214572847346553 0.007488503292600007 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 4303 22294 AIIGGMFTV True PC9_epitope_Rep1 907.48372507119 907.48317496793 90.565 1 0.110433212740697 0.0016214572847346553 0.00748995400235413 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 23065 17844 EVIEKFDYV True PC9_epitope_Rep3 1140.5702911461199 1140.56918993586 73.833 2 0.11042487497048792 0.0016214572847346553 0.007491371946045194 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 75189 17224 NIANHFFTV True PC9_epitope_Rep6 1061.52942939365 1061.52832993586 78.846 2 0.1104230322849046 0.0016214572847346553 0.007491685353151394 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 21243 12246 ERDPSPWAV True PC9_epitope_Rep6 1055.50360856863 1055.5025099358602 58.483 2 0.11041977509450986 0.0016214572847346553 0.007492239372665733 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 110907 6503 TGVPDRFTG True NCI_RA007_Epitope_Rep3 948.46649478392 948.46538993586 32.617 2 0.11041395033956494 0.0016214572847346553 0.007493230211173709 ['CON__Q05B55'] 96838 6425 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42828993586 29.519 2 0.11041277019541001 0.0016214572847346553 0.007493430978795784 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 52554 7065 KLFVGGLK True NCI_RA007_Epitope_Rep4 860.5483739330798 860.54726993586 33.8 2 0.11041230600019243 0.0016214572847346553 0.007493509949701146 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 61491 7165 LKDDEVAQLK True PC9_epitope_Rep5 1157.62920300457 1157.6275649037902 32.527 3 0.11041194694310692 0.0016214572847346553 0.007493571034603164 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 134626 17870 VYSPHVLNL True PC9_epitope_Rep3 1040.5654805492 1040.5643899358602 73.934 2 0.11040977978628783 0.0016214572847346553 0.007493939734285478 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 3272 5405 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 26.185 2 0.11040172177495458 0.0016214572847346553 0.00749531080245902 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 93380 5510 RQAELAQWQK True NCI_RA007_Epitope_Rep4 1256.6625688215197 1256.66092490379 27.786 3 0.11039311855330021 0.0016214572847346553 0.00749677490577195 ['ENSG00000183978|ENST00000328434|COA3'] 20892 20926 EQLNGILLHL True PC9_epitope_Rep2 1148.65535818276 1148.6542699358602 85.938 2 0.11039252921139908 0.0016214572847346553 0.0074968752105813 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 9554 10289 AWAPKPYHKF True PC9_epitope_Rep3 1243.6502132326698 1243.64857490379 44.523 3 0.11038970904915768 0.0016214572847346553 0.007497355214503227 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 34725 5475 GQEDHYNNL True PC9_epitope_Rep4 1088.45230127176 1088.45120993586 27.808 2 0.11038546126353228 0.0016214572847346553 0.007498078262255128 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 99224 12383 SHLVATVTV True PC9_epitope_Rep1 925.52328138405 925.52218993586 52.49 2 0.1103834230533148 0.0016214572847346553 0.00749842522538929 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 85778 6036 QHDPSAVAV True PC9_epitope_Rep1 922.4508447197799 922.44974993586 28.031 2 0.11037940850444651 0.0016214572847346553 0.007499108664712708 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 132215 17188 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 71.27 2 0.11037379078607544 0.0016214572847346553 0.007500065129750395 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 9405 8468 AVTEAEIQQLK True NCI_RA007_Epitope_Rep5 1228.66631678928 1228.66520993586 39.254 2 0.11037080922232476 0.0016214572847346553 0.0075005728146341 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 129194 11585 VQSNRILGV True PC9_epitope_Rep5 984.5716285587998 984.57052993586 49.558 2 0.11036993945110288 0.0016214572847346553 0.007500720920932469 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 62067 15633 LLDTVELATY True H1975_Epitope_Rep2 1136.5965058939598 1136.59540993586 65.286 2 0.1103662551803363 0.0016214572847346553 0.007501348316931518 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 47930 12682 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.6890249037901 54.089 3 0.11036579691669239 0.0016214572847346553 0.007501426358386525 ['ENSG00000103479|ENST00000262133|RBL2'] 140253 19072 YRAPELLL True PC9_epitope_Rep1 973.5596668927699 973.55856993586 78.15 2 0.11036277846058157 0.0016214572847346553 0.00750194041552462 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 138368 13714 YHGAEIVSL True PC9_epitope_Rep4 987.50254593947 987.50144993586 60.639 2 0.11036157075611437 0.0016214572847346553 0.007502146102763763 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 6339 6006 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 27.916 2 0.11036141483632665 0.0016214572847346553 0.0075021726582594145 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 31186 17409 GAYTQVIFL True H1975_Epitope_Rep2 1010.54368247546 1010.54258993586 72.256 2 0.11035985372012906 0.0016214572847346553 0.007502438544946335 ['ENSG00000171298|ENST00000302262|GAA'] 63021 16589 LLPSRQFGF True PC9_epitope_Rep6 1063.5814649665099 1063.58036993586 76.261 2 0.11035429357484626 0.0016214572847346553 0.0075033856135768295 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 139421 21312 YLPELLQTV True PC9_epitope_Rep4 1074.5961119711399 1074.59557496793 90.143 1 0.1103516499986358 0.0016214572847346553 0.007503835938783098 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 8403 16495 ATLSKIIQV True PC9_epitope_Rep1 971.6015317047498 971.60042993586 68.273 2 0.11034868541898044 0.0016214572847346553 0.007504340977044309 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 106760 7979 STYRDFQQA True PC9_epitope_Rep5 1114.50433684462 1114.5032299358602 35.63 2 0.11034432890737719 0.0016214572847346553 0.007505083200942591 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.S39G|1|0.41|ENSG00000125676|chrX:123712865-123712865|T/C|missense_variant'] 121873 13819 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 64.959 2 0.11033602293109665 0.0016214572847346553 0.007506498496391735 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 70184 16699 LVQAFQFTDK True PC9_epitope_Rep1 1195.62372370131 1195.62262993586 69.061 2 0.11033400350883577 0.0016214572847346553 0.0075068426345144094 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 128865 8771 VQDNPRALV True PC9_epitope_Rep4 1010.5508931142199 1010.54978993586 41.247 2 0.11033356474948705 0.0016214572847346553 0.007506917407332247 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89'] 112851 18043 TLKDLDVAL True PC9_epitope_Rep1 986.5648118428599 986.56370993586 74.194 2 0.11031912221118152 0.0016214572847346553 0.007509379088677628 ['nc|ENSG00000203705|Q17R31-5|TATDN3', 'nc|ENSG00000203705|Q17R31-2|TATDN3', 'ENSG00000203705|ENST00000366974|TATDN3', 'nc|ENSG00000203705|Q17R31-3|TATDN3'] 88172 15857 QRVPLSVQL True PC9_epitope_Rep2 1038.61857875122 1038.61748993586 66.252 2 0.11031841640821498 0.0016214572847346553 0.00750949941038802 ['ENSG00000125826|ENST00000356286|RBCK1'] 139351 20474 YLLPAIVHI True PC9_epitope_Rep4 1037.62735252977 1037.6262499358602 86.9 2 0.11031265344647609 0.0016214572847346553 0.00751048192063952 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 75809 20089 NLNPEFISV True PC9_epitope_Rep4 1031.5287606873098 1031.52817496793 85.404 1 0.1103120164799777 0.0016214572847346553 0.007510590522797046 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 109835 11411 TEELAYLK True PC9_epitope_Rep2 965.50696261357 965.50586993586 49.214 2 0.11030604976739493 0.0016214572847346553 0.007511607915129228 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 97896 7581 SELVSNGV True H1975_Epitope_Rep3 803.40249754503 803.40194496793 34.141 1 0.11030535580925022 0.0016214572847346553 0.007511726251533717 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 2047 14718 AELADVLTEA True H1975_Epitope_Rep2 1030.51825557326 1030.51714993586 61.773 2 0.11030200635322596 0.0016214572847346553 0.0075122974389712285 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 139273 22244 YLITLLEHL True PC9_epitope_Rep2 1113.64339651673 1113.6422899358602 91.038 2 0.11029194515737577 0.0016214572847346553 0.007514013441396466 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant', 'BUB1|p.E43Q|1|0.2|ENSG00000169679|chr2:110674184-110674184|C/G|missense_variant'] 140430 20895 YRGIFPVL True PC9_epitope_Rep1 963.5541875895099 963.55308993586 85.193 2 0.1102850953074544 0.0016214572847346553 0.007515181944745955 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 12743 8158 DLEGLSQR True PC9_epitope_Rep4 916.46140940348 916.46030993586 38.834 2 0.11027936552577705 0.0016214572847346553 0.007516159512670463 ['ENSG00000100345|ENST00000216181|MYH9'] 14953 14134 DYFEEYGK True PC9_epitope_Rep3 1049.4341915961297 1049.4330899358602 59.451 2 0.11027777998507429 0.0016214572847346553 0.007516430046222059 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 1899 13525 AEIGAVTLVSA True H1975_Epitope_Rep2 1029.57062549929 1029.5695299358601 57.16 2 0.11027490884558055 0.0016214572847346553 0.007516919959573543 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 38311 4011 HEGETAYIR True NCI_RA007_Epitope_Rep2 1074.5094222250598 1074.50832993586 20.24 2 0.11026750911880766 0.0016214572847346553 0.007518182745183605 ['ENSG00000136450|ENST00000258962|SRSF1'] 91007 9813 RFEEKHAYF True PC9_epitope_Rep3 1225.5880068989297 1225.58635490379 42.702 3 0.11026328635308383 0.0016214572847346553 0.007518903464774378 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 85048 15541 QEIFEVNNLP True H1975_Epitope_Rep2 1201.59790287629 1201.5968099358602 64.934 2 0.1102625299268364 0.0016214572847346553 0.0075190325747095926 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000554892.1_1_14:24028960-24029314:-|nuORF', 'ENST00000557391.1_1_14:24028960-24029655:-|nuORF'] 97845 11709 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42760993586 53.17 2 0.11026249313717801 0.0016214572847346553 0.007519038854174094 ['ENSG00000126247|ENST00000246533|CAPNS1'] 23506 16997 EVVERLLSV True PC9_epitope_Rep6 1042.60225998074 1042.60116993586 77.929 2 0.11025517115661601 0.0016214572847346553 0.007520288711677725 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 89688 13859 RAADVLVYL True NCI_RA007_Epitope_Rep4 1018.5811306133398 1018.58002993586 60.571 2 0.11025381711792454 0.0016214572847346553 0.007520519867245474 ['ENSG00000126391|ENST00000317568|FRMD8', 'nc|ENSG00000227942|Q9BZ68|FRMD8P1', 'nc|ENSG00000126391|Q9BZ67-3|FRMD8'] 134181 18724 VYLPNINKI True PC9_epitope_Rep5 1072.62808080576 1072.6269899358601 77.038 2 0.11024752149111362 0.0016214572847346553 0.007521594719378351 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 96440 16071 SAAFPGASL True PC9_epitope_Rep6 819.41266830591 819.41211496793 74.143 1 0.11023921499363563 0.0016214572847346553 0.007523013114680339 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 8275 7411 ATIEELTEK True NCI_RA007_Epitope_Rep4 1032.5339056373998 1032.53280993586 35.148 2 0.1102377664860111 0.0016214572847346553 0.007523260484451691 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON'] 89438 19825 QYEEQFVTL True PC9_epitope_Rep4 1155.5448046742697 1155.54427496793 84.385 1 0.11023514710878106 0.0016214572847346553 0.007523707830163903 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 40996 5571 HTEVPARNLY True H1975_Epitope_Rep3 1198.6094706195 1198.60783490379 26.47 3 0.11023008061356741 0.0016214572847346553 0.007524573175587707 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 74956 16017 NHM[Oxidation]AVAFVL True PC9_epitope_Rep4 1016.5113371818 1016.51022993586 69.542 2 0.11022407629400308 0.0016214572847346553 0.007525598823805757 ['ENSG00000164919|ENST00000520468|COX6C'] 108798 18209 SYTSGLETL True PC9_epitope_Rep2 969.4654917244101 969.46438993586 75.355 2 0.1102195401576224 0.0016214572847346553 0.007526373768970861 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 75807 20947 NLNPEFISV True PC9_epitope_Rep3 1031.5287606873098 1031.52817496793 85.85 1 0.11021749522189472 0.0016214572847346553 0.00752672314724814 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 76613 18693 NQPGVLIQV True PC9_epitope_Rep4 966.5498304850599 966.54928496793 79.983 1 0.11020728698059398 0.0016214572847346553 0.007528467464858024 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 13976 7486 DRDPASGTAL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 33.745 2 0.11020632729426631 0.0016214572847346553 0.007528631469889739 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 90158 5999 REDFKTAVV True H1975_Epitope_Rep3 1063.56620882519 1063.5651099358602 28.088 2 0.11020455131700649 0.0016214572847346553 0.0075289349835932304 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-4|EFCAB11', 'ENST00000555070.1_1_14:89878823-90420935:-|nuORF'] 6921 17227 AQIHDLVLV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 74.271 2 0.1101806525270386 0.0016214572847346553 0.007533020426893589 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 98078 15877 SEQYYIIEV True H1975_Epitope_Rep2 1142.54955570154 1142.5484499358602 66.27 2 0.11017932821745194 0.0016214572847346553 0.007533246877248235 ['ENSG00000084774|ENST00000264705|CAD'] 47867 10480 IYIAGHPAF True NCI_RA007_Epitope_Rep5 987.51780208079 987.51670993586 46.943 2 0.11017640118934104 0.0016214572847346553 0.007533747407852621 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 35925 4541 GTSITVPQK True NCI_RA007_Epitope_Rep3 929.5181960036099 929.51708993586 24.73 2 0.11017302909680542 0.0016214572847346553 0.007534324085672983 ['nc|ENSG00000134851|Q9HC07-2|TMEM165', 'ENST00000508404.5_1_4:56269487-56291616:+|nuORF', 'ENSG00000134851|ENST00000381334|TMEM165'] 9804 8841 AYLEAHETF True NCI_RA007_Epitope_Rep3 1079.4923751785898 1079.4912699358601 41.868 2 0.11017172875883346 0.0016214572847346553 0.00753454647414825 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 29338 17878 FVDEYDPTI True PC9_epitope_Rep6 1097.49170647225 1097.49117496793 81.394 1 0.11016005904395482 0.0016214572847346553 0.0075365425548298065 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 136838 14852 YADGESFLGY True H1975_Epitope_Rep2 1120.4713053808398 1120.4707749679299 62.282 1 0.11015110291561342 0.0016214572847346553 0.007538074828897211 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 13119 16753 DLQSNLLQV True PC9_epitope_Rep6 1028.5502244078798 1028.54912993586 76.931 2 0.11012718188553378 0.0016214572847346553 0.007542168874771092 ['ENSG00000131067|ENST00000336431|GGT7', 'GGT7|p.P598R|1|0.26|ENSG00000131067|chr20:34849993-34849993|G/C|missense_variant'] 43031 5090 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 24.66 2 0.11012545254785672 0.0016214572847346553 0.007542464931450374 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 54146 15085 KVPEWVDTV True PC9_epitope_Rep6 1071.5600608155898 1071.5589699358602 70.082 2 0.11011945767828821 0.0016214572847346553 0.0075434913195502355 ['ENSG00000105372|ENST00000598742|RPS19'] 74791 10335 NHDTALTL True PC9_epitope_Rep5 883.43994568291 883.43884993586 44.737 2 0.11011941526729531 0.0016214572847346553 0.007543498581263213 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 29435 17242 FVEEEEHFL True PC9_epitope_Rep2 1177.52915461013 1177.52804993586 71.583 2 0.11011586596073254 0.0016214572847346553 0.007544106326085642 ['ENSG00000168159|ENST00000305943|RNF187'] 17757 13721 EHSGPPIVI True PC9_epitope_Rep5 947.5076313199099 947.50652993586 57.804 2 0.1101035479780819 0.0016214572847346553 0.0075462158913122065 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 77851 16545 NVELDPEIQ True PC9_epitope_Rep3 1055.51350454599 1055.5124099358602 68.779 2 0.11009474986327752 0.0016214572847346553 0.007547722996685763 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 105570 15861 SSDGAISLLTY True H1975_Epitope_Rep3 1125.55536935797 1125.55477496793 66.458 1 0.11006787392741112 0.0016214572847346553 0.0075523286112294565 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 74261 5298 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.5074749679301 25.434 1 0.11006139744559595 0.0016214572847346553 0.0075534388645025095 ['ENSG00000167658|ENST00000309311|EEF2'] 142726 16177 YYQGGKFQF True PC9_epitope_Rep1 1136.52909504048 1136.5279899358602 67.039 2 0.11005417326625233 0.0016214572847346553 0.007554677480581922 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 7232 22374 ARDEIIWLL True PC9_epitope_Rep1 1127.63389446219 1127.63278993586 90.877 2 0.11005197384462533 0.0016214572847346553 0.007555054619705813 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 124740 16500 VHAPPMQLGF True PC9_epitope_Rep6 1095.5535359665098 1095.5524299358601 75.898 2 0.11005096962512266 0.0016214572847346553 0.007555226821238665 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 97989 2760 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 14.7 2 0.11005084642915024 0.0016214572847346553 0.0075552479468966 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 128942 20842 VQIGDIVTV True PC9_epitope_Rep2 942.5385970950199 942.5380449679301 85.614 1 0.1100465722605473 0.0016214572847346553 0.007555980917127176 ['ENSG00000142534|ENST00000270625|RPS11'] 33595 18788 GLFIIDGK True PC9_epitope_Rep3 861.4960040070499 861.49490993586 77.491 2 0.11004343029945461 0.0016214572847346553 0.007556519770773203 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF'] 7597 18558 ASFNDTFVHV True PC9_epitope_Rep1 1135.5298233164701 1135.5287299358602 76.171 2 0.11003942291555652 0.0016214572847346553 0.007557207100356879 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 139235 19436 YLGPTLFL True H1975_Epitope_Rep2 922.5164050984599 922.5158549679301 80.668 1 0.11003870529016618 0.0016214572847346553 0.0075573301908177445 ['ENST00000462381.1_1_7:73151257-73151715:-|nuORF', 'nc|ENSG00000106077|Q8NFV4-6|ABHD11', 'nc|ENSG00000106077|Q8NFV4-4|ABHD11', 'ENSG00000106077|ENST00000222800|ABHD11'] 6390 4439 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 24.229 2 0.11003785761252272 0.0016214572847346553 0.007557475590945852 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 71849 15069 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51432993586 63.214 2 0.11003341194639892 0.0016214572847346553 0.007558238189758787 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 16262 10018 EEEYPGITA True H1975_Epitope_Rep2 1007.4447562798298 1007.44364993586 43.525 2 0.11003018242522279 0.0016214572847346553 0.007558792220659771 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 1287 7686 AEDPETQVV True H1975_Epitope_Rep3 986.4556553166999 986.4551049679301 34.548 1 0.11002011858610163 0.0016214572847346553 0.007560518944465101 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 96694 9959 SALESQIR True PC9_epitope_Rep1 902.48214484806 902.48104993586 43.17 2 0.11000032720052755 0.0016214572847346553 0.007563915804409004 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF', 'ENST00000478916.5_1_6:152456172-152464916:-|nuORF'] 109753 5242 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 25.25 2 0.10999301273811452 0.0016214572847346553 0.007565171582772294 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 43827 18392 IHSEPLGVVL True PC9_epitope_Rep5 1062.60734536118 1062.6062499358602 75.763 2 0.10999231331282601 0.0016214572847346553 0.007565291673671061 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 50051 8410 KKFENEIIL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64755490379 40.171 3 0.10998834895035679 0.0016214572847346553 0.00756597238713496 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 40086 11144 HPVLLTEA True PC9_epitope_Rep1 878.4861675993401 878.48561496793 47.749 1 0.10998135163965492 0.0016214572847346553 0.007567174027112391 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 103799 11468 SPVYVGRVV True PC9_epitope_Rep2 974.5549158654999 974.55380993586 49.43 2 0.10997917374621582 0.0016214572847346553 0.007567548071850671 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 88046 14678 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54527496793 61.464 1 0.10997345987503998 0.0016214572847346553 0.0075685294919920765 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 104935 9468 SRDDTTLNAL True PC9_epitope_Rep6 1104.54111627616 1104.54000993586 46.657 2 0.10996913573859354 0.0016214572847346553 0.007569272291718057 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 1726 5701 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 26.925 1 0.10996795684530386 0.0016214572847346553 0.007569474814114846 ['ENSG00000161847|ENST00000617231|RAVER1'] 1644 6402 AEFVEVTK True H1975_Epitope_Rep1 921.4807478657299 921.47964993586 29.684 2 0.10996745246750983 0.0016214572847346553 0.0075695614629123584 ['CON__P02769'] 115603 12781 TRTSQVLVI True PC9_epitope_Rep2 1015.6025943339098 1015.60148993586 54.465 2 0.10996536324822448 0.0016214572847346553 0.0075699203872971995 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'ENST00000521468.1_1_8:124195447-124212099:+|nuORF'] 31995 5325 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 25.555 2 0.10995895723842758 0.0016214572847346553 0.0075710210316510505 ['ENSG00000108344|ENST00000264639|PSMD3'] 90071 5004 REAEFTKSIA True H1975_Epitope_Rep3 1150.59823722946 1150.5965849037902 24.374 3 0.10995394214077982 0.0016214572847346553 0.00757188280531233 ['ENSG00000118363|ENST00000263672|SPCS2'] 140577 8323 YRQKQVVIL True PC9_epitope_Rep4 1145.6920780446499 1145.6909899358602 39.473 2 0.1099445345917811 0.0016214572847346553 0.007573499615447542 ['ENSG00000143179|ENST00000367879|UCK2'] 87563 9424 QQLGKVVQV True PC9_epitope_Rep2 997.5920296502098 997.59092993586 41.589 2 0.10993764860748148 0.0016214572847346553 0.007574683273301946 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 29344 21284 FVDFNDPNF True PC9_epitope_Rep5 1113.47672511445 1113.47562993586 86.922 2 0.10993746411397354 0.0016214572847346553 0.007574714989047706 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 74528 20032 NFLPPIIARF True PC9_epitope_Rep6 1186.6862643882198 1186.6851699358601 89.721 2 0.10992967850926613 0.0016214572847346553 0.007576053506871193 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 27882 12521 FQDPYTRSL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 59.596 2 0.10992332542266962 0.0016214572847346553 0.007577145912523885 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 10293 9914 C[Carbamidomethyl]C[Carbamidomethyl]SGAIIVLTK True NCI_RA007_Epitope_Rep2 1220.62571548946 1220.62460993586 43.189 2 0.10991725186043672 0.0016214572847346553 0.007578190396659452 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF'] 85171 5474 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47687496793 26.078 1 0.10990580041698735 0.0016214572847346553 0.007580160105711454 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 76805 6105 NRAPNTAEL True PC9_epitope_Rep3 984.4988575413599 984.49776993586 28.531 2 0.10990471567497585 0.0016214572847346553 0.007580346712752384 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 6136 14975 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 62.605 2 0.10990366033514434 0.0016214572847346553 0.007580528266028593 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 103217 9129 SPKQILDPA True PC9_epitope_Rep1 967.5338460677499 967.53274993586 39.966 2 0.1099035892750995 0.0016214572847346553 0.007580540490852257 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 77417 16044 NSLDAKEIYL True PC9_epitope_Rep4 1164.60265390356 1164.60154993586 69.647 2 0.10990309540892777 0.0016214572847346553 0.007580625453707097 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10'] 5627 13055 ANTFVAELK True PC9_epitope_Rep3 991.5338460677499 991.53274993586 55.244 2 0.10990288005996442 0.0016214572847346553 0.0075806625018105915 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 22415 3712 ETEKM[Oxidation]IEKY True H1975_Epitope_Rep3 1185.5587408666897 1185.5576499358601 19.339 2 0.10989917704222284 0.0016214572847346553 0.007581299587213465 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 38010 19792 HAMTEFLEV True PC9_epitope_Rep1 1075.50083168731 1075.4997299358602 80.951 2 0.10989790544017547 0.0016214572847346553 0.007581518371827638 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 95196 14556 RVIGTLEEV True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 61.117 2 0.10989667312732349 0.0016214572847346553 0.007581730402389614 ['ENSG00000100401|ENST00000356244|RANGAP1'] 33745 7741 GLIYEETR True NCI_RA007_Epitope_Rep1 979.49746055903 979.49636993586 34.105 2 0.10989511942224954 0.0016214572847346553 0.007581997739557034 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000275663|ENST00000611444|H4C7'] 6635 18504 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 76.512 2 0.109894743445534 0.0016214572847346553 0.007582062433094626 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 104781 20547 SQYEEQFVTL True PC9_epitope_Rep2 1242.5768330785397 1242.5757299358602 84.467 2 0.10989250943603768 0.0016214572847346553 0.007582446845503426 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 105464 20919 SRVPLLLPL True PC9_epitope_Rep2 1006.65390163078 1006.65280993586 85.911 2 0.10989201898693247 0.0016214572847346553 0.007582531241006829 ['ENSG00000168140|ENST00000304735|VASN'] 142350 19081 YYEHEFVEL True PC9_epitope_Rep5 1227.5448046742697 1227.54370993586 78.425 2 0.10988296556748754 0.0016214572847346553 0.007584089298454547 ['nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 1496 6499 AEELPHIHA True H1975_Epitope_Rep2 1015.5086939490701 1015.50758993586 29.915 2 0.10988134202068728 0.0016214572847346553 0.0075843687371186215 ['ENST00000567436.1_1_16:30204298-30204508:-|nuORF', 'ENSG00000183336|ENST00000330978|BOLA2', 'ENSG00000169627|ENST00000651894|BOLA2B'] 14922 16133 DYDSVFHHL True PC9_epitope_Rep2 1131.4985231881901 1131.49742993586 67.314 2 0.10987939735305091 0.0016214572847346553 0.007584703458972408 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'EPC1|p.S472L|1|0.26|ENSG00000120616|chr10:32285027-32285027|G/A|missense_variant', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 118507 16377 TYQDIQNTI True PC9_epitope_Rep1 1094.52440358286 1094.52387496793 67.816 1 0.1098585720814157 0.0016214572847346553 0.007588288860696967 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 35445 3430 GSGTAEVELKK True NCI_RA007_Epitope_Rep2 1117.59790287629 1117.5968099358602 18.0 2 0.10985595445390009 0.0016214572847346553 0.007588739642793015 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 78286 20226 NYIKDLNIL True PC9_epitope_Rep3 1104.61791004488 1104.6168099358601 83.059 2 0.10985522730508487 0.0016214572847346553 0.007588864869812574 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 9075 14513 AVIEAEKIAQV True PC9_epitope_Rep2 1169.66558851329 1169.66448993586 61.094 2 0.10984907713263399 0.0016214572847346553 0.007589924110845092 ['ENSG00000107566|ENST00000421367|ERLIN1'] 116600 6531 TVADKIHSV True PC9_epitope_Rep5 968.52909504048 968.52798993586 30.094 2 0.10984687249912199 0.0016214572847346553 0.007590303848533905 ['ENSG00000276023|ENST00000617516|DUSP14'] 110121 9297 TEMPGTLQA True H1975_Epitope_Rep3 946.4429824580199 946.44188993586 40.755 2 0.10983343420076107 0.0016214572847346553 0.00759261892899199 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 105427 11604 SRTATITVL True PC9_epitope_Rep2 960.5603951687599 960.55928993586 49.96 2 0.10982878462782689 0.0016214572847346553 0.007593420092257296 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 30336 18468 GAAPLPLLL True H1975_Epitope_Rep3 863.54803957991 863.5474949679301 77.433 1 0.10982551616677344 0.0016214572847346553 0.007593983326423852 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 38324 9558 HEGPVWQV True H1975_Epitope_Rep3 950.46101548066 950.45990993586 41.774 2 0.10982481190980989 0.0016214572847346553 0.007594104692063635 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 109891 10695 TEFLFHTA True NCI_RA007_Epitope_Rep3 964.46543215476 964.46432993586 49.116 2 0.10982341895663596 0.0016214572847346553 0.0075943447472570326 ['ENSG00000065308|ENST00000182527|TRAM2'] 92186 7710 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 36.358 2 0.10981712121869835 0.0016214572847346553 0.007595430162221244 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 96209 15278 RYPTSIASL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 63.589 2 0.10981279809625319 0.0016214572847346553 0.007596175339051859 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 71423 11734 LYTEKFEEF True NCI_RA007_Epitope_Rep4 1204.5652057656796 1204.5641099358602 52.105 2 0.10981139907227817 0.0016214572847346553 0.0075964165040177615 ['ENSG00000084652|ENST00000373610|TXLNA'] 120005 6523 [Acetylation]-VDREQLVQK True H1975_Epitope_Rep3 1155.62478664677 1155.62368993586 30.058 2 0.10981076572818951 0.0016214572847346553 0.007596525682854403 ['ENSG00000170027|ENST00000307630|YWHAG'] 93319 6903 RPSPPVQSV True PC9_epitope_Rep3 965.52942939365 965.52832993586 31.566 2 0.10980954713639177 0.0016214572847346553 0.0075967357537139344 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 12048 7106 DHSQAVTL True PC9_epitope_Rep4 869.42429561877 869.42318993586 34.602 2 0.10980598078500174 0.0016214572847346553 0.0075973505829122785 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 87573 8525 QQLGKVVQV True PC9_epitope_Rep6 997.5920296502098 997.59092993586 42.537 2 0.10979907147189397 0.0016214572847346553 0.007598541866396829 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 13651 18999 DPNTVFALVNY True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 79.676 2 0.1097940913423878 0.0016214572847346553 0.007599400637674834 ['CON__P34955'] 72723 7473 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep1 1057.4750115590298 1057.47390993586 33.743 2 0.10979085900048273 0.0016214572847346553 0.007599958071452304 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'TXNRD1|p.Y161C|1|0.29|ENSG00000198431|chr12:104311357-104311357|A/G|missense_variant'] 133355 20940 VVVGDLVEV True PC9_epitope_Rep1 927.5276980581499 927.52660993586 85.366 2 0.10978744427600352 0.0016214572847346553 0.0076005470009601174 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 28063 19862 FQSSAVMAL True PC9_epitope_Rep3 952.4688032830398 952.46770993586 81.636 2 0.10977039702406773 0.0016214572847346553 0.007603487760287237 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 54509 14628 KYIEGVSDF True PC9_epitope_Rep2 1056.51277627 1056.51166993586 61.534 2 0.10976590849881498 0.0016214572847346553 0.007604262242309689 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 85369 5453 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.4499649679301 26.003 1 0.10976020534535173 0.0016214572847346553 0.007605246414898458 ['ENSG00000196878|ENST00000356082|LAMB3'] 97834 11953 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 51.055 1 0.10975295907675114 0.0016214572847346553 0.007606497054876007 ['ENSG00000126247|ENST00000246533|CAPNS1'] 92514 12893 RLYGYFHDA True PC9_epitope_Rep5 1140.53524305008 1140.5335949037901 54.603 3 0.10975159752693428 0.0016214572847346553 0.0076067320681588385 ['ENSG00000087586|ENST00000395915|AURKA'] 77110 7246 NRMDGTYAC True PC9_epitope_Rep5 1029.4008003762099 1029.39970993586 32.835 2 0.10973776867335062 0.0016214572847346553 0.007609119425317227 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 21600 11631 ERQSQALIL True PC9_epitope_Rep4 1056.5927579262 1056.5916699358602 52.496 2 0.10973722580461662 0.0016214572847346553 0.007609213158742819 ['ENSG00000095319|ENST00000372577|NUP188'] 89820 16322 RALTVPEL True PC9_epitope_Rep1 897.5283667644899 897.52726993586 67.601 2 0.10973663756373411 0.0016214572847346553 0.007609314727526283 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 140119 20203 YQNYIMEGV True PC9_epitope_Rep1 1115.49574630687 1115.49464993586 82.54 2 0.10973233970967824 0.0016214572847346553 0.007610056857511641 ['ENSG00000124226|ENST00000244061|RNF114', 'nc|ENSG00000124226|Q9Y508-2|RNF114'] 140943 10429 YSETATAIAY True H1975_Epitope_Rep2 1088.5026055091198 1088.50207496793 45.129 1 0.10972567461704541 0.0016214572847346553 0.007611207887700007 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 45639 18168 IRDNLAISL True PC9_epitope_Rep5 1013.58694426977 1013.58584993586 74.892 2 0.1097208219987214 0.0016214572847346553 0.007612046017935773 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 60533 19346 LHDISSLL True PC9_epitope_Rep1 896.49673228304 896.49562993586 79.219 2 0.10971327257993026 0.0016214572847346553 0.007613350109102931 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 29692 22829 FVLPELPSV True PC9_epitope_Rep5 999.56408356687 999.5635749679301 92.807 1 0.10969903348044893 0.0016214572847346553 0.007615810367487966 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 104071 9548 SQDPYHETL True PC9_epitope_Rep3 1088.4774533904401 1088.47634993586 41.675 2 0.10969760497078619 0.0016214572847346553 0.007616057230479255 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 35773 15618 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.5172549679301 64.894 1 0.10969714303484233 0.0016214572847346553 0.007616137060007666 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 38563 6750 HETSIDISA True NCI_RA007_Epitope_Rep4 971.45598966987 971.45488993586 32.583 2 0.10969170646007274 0.0016214572847346553 0.007617076643247495 ['nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 114571 10838 TQDEVSQTL True PC9_epitope_Rep5 1019.47711903727 1019.47602993586 46.676 2 0.10969126018774389 0.0016214572847346553 0.007617153775829376 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7'] 53387 19185 KQVEEIFNL True PC9_epitope_Rep2 1118.5971746003 1118.5960699358602 79.168 2 0.1096884312627601 0.0016214572847346553 0.007617642737636132 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 2918 11508 AEYLGANSVV True H1975_Epitope_Rep2 1021.5080252427299 1021.50692993586 49.323 2 0.10968373449721901 0.0016214572847346553 0.0076184546108709625 ['ENSG00000128059|ENST00000264220|PPAT', 'ENST00000425339.2_1_4:57261520-57265668:-|nuORF', 'ENST00000496669.1_1_3:87100344-87100812:-|nuORF'] 35136 18437 GQWIAETGV True PC9_epitope_Rep2 959.4712458111899 959.47014993586 76.251 2 0.10968227568019974 0.0016214572847346553 0.007618706796001899 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 31423 11744 GEAEAFAIGA True NCI_RA007_Epitope_Rep4 934.4396113297398 934.4390649679301 52.143 1 0.10967548165546212 0.0016214572847346553 0.007619881382700544 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 46619 8752 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51200993586 38.628 2 0.10967023230914805 0.0016214572847346553 0.007620789037123696 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 138625 11940 YIEGGTASGFY True H1975_Epitope_Rep2 1163.51350454599 1163.5124099358602 51.006 2 0.10966984613653334 0.0016214572847346553 0.007620855813617299 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 95936 11329 RYLEKPMEI True PC9_epitope_Rep2 1177.6165301458898 1177.6154299358602 48.898 2 0.10964746895602927 0.0016214572847346553 0.007624726214057425 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 7606 17231 ASFNDTFVHV True PC9_epitope_Rep4 1135.5298233164701 1135.52927496793 74.287 1 0.10964415514729256 0.0016214572847346553 0.007625299538293931 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 26705 19161 FIVHTIEEI True PC9_epitope_Rep2 1099.5913609438699 1099.59026993586 79.076 2 0.10964082719104862 0.0016214572847346553 0.007625875352129202 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 44308 16533 ILDEVIMGY True H1975_Epitope_Rep3 1051.5259838059899 1051.52488993586 69.091 2 0.1096405712434719 0.0016214572847346553 0.007625919638753205 ['ENSG00000138160|ENST00000260731|KIF11'] 45848 8366 ISDPGVQGY True H1975_Epitope_Rep1 934.43961132974 934.4390649679301 37.108 1 0.10963983723473518 0.0016214572847346553 0.0076260466457058725 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 79258 8173 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 36.793 2 0.10963897071611481 0.0016214572847346553 0.007626196583731301 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 85349 9050 QETLTNISA True H1975_Epitope_Rep2 975.48728979815 975.48618993586 39.764 2 0.10963868400982894 0.0016214572847346553 0.007626246194572791 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 76570 21194 NQLDSLMGL True PC9_epitope_Rep4 989.48518162317 989.48408993586 89.688 2 0.10963830513379544 0.0016214572847346553 0.007626311754684069 ['ENSG00000135148|ENST00000412615|TRAFD1'] 118330 12836 TYMKDLYQL True NCI_RA007_Epitope_Rep1 1173.5739966275698 1173.57288993586 53.919 2 0.10963751233658262 0.0016214572847346553 0.007626448940825658 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 111423 14638 THSNTIVVSL True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 61.128 2 0.10963240661330129 0.0016214572847346553 0.0076273324956171356 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 9474 8164 AVVIVDDR True PC9_epitope_Rep5 885.4919812557699 885.49088993586 36.344 2 0.10963181033251472 0.0016214572847346553 0.007627435689553386 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 52835 11000 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 47.632 2 0.10963122887532471 0.0016214572847346553 0.007627536319378014 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 11184 5698 DDSPDLPK True NCI_RA007_Epitope_Rep2 885.40797684829 885.40686993586 26.779 2 0.10963007456000597 0.0016214572847346553 0.007627736094633478 ['CON__P02769'] 31419 11915 GEAEAFAIGA True H1975_Epitope_Rep2 934.4396113297398 934.4390649679301 50.91 1 0.10962940453316627 0.0016214572847346553 0.007627852057280956 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 6810 5808 AQEVPGPAA True H1975_Epitope_Rep3 838.4184819623398 838.41793496793 27.363 1 0.10962551462777194 0.0016214572847346553 0.007628525323265526 ['ENSG00000146278|ENST00000336032|PNRC1'] 90290 6161 REENPSSVLA True H1975_Epitope_Rep3 1100.5462016565998 1100.5451099358602 28.711 2 0.10962316754401531 0.0016214572847346553 0.007628931585000491 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-10|NR3C1'] 18855 12011 ELDPTNMTY True H1975_Epitope_Rep3 1082.45902644498 1082.45847496793 51.361 1 0.10961994726270101 0.0016214572847346553 0.007629489024387734 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 98010 8075 SEQEPVQGVEP True H1975_Epitope_Rep2 1197.5513466066898 1197.5502499358602 36.008 2 0.1096173474288116 0.0016214572847346553 0.0076299390913683995 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B'] 76959 7051 NRDVPNETL True PC9_epitope_Rep2 1056.51998690876 1056.5188899358602 32.52 2 0.10960837735307528 0.0016214572847346553 0.0076314921317571114 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.V235A|1|0.18|ENSG00000205339|chr11:9417126-9417126|T/C|missense_variant', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 103618 12478 SPTGGFVDA True PC9_epitope_Rep3 849.3868474808899 849.3862949679301 53.022 1 0.10960537986367798 0.0016214572847346553 0.0076320111722929535 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 137590 8321 YEEQPGLQP True H1975_Epitope_Rep3 1059.4872897981497 1059.48618993586 36.989 2 0.10960431164700016 0.0016214572847346553 0.007632196151252799 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 43848 11128 IHSPVVNEL True PC9_epitope_Rep6 1006.54474510462 1006.54364993586 53.744 2 0.10959189818546905 0.0016214572847346553 0.007634346060225254 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 93097 8544 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 37.82 2 0.109586019314993 0.0016214572847346553 0.007635364436219468 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 40367 17858 HQSGIVQLL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 73.709 2 0.10958487404665755 0.0016214572847346553 0.007635562842290664 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 100193 22810 SIVDFLITA True PC9_epitope_Rep4 977.5433481222899 977.54224993586 95.96 2 0.10958383423826572 0.0016214572847346553 0.007635742982816204 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 134718 22562 VYTPVDSLVF True PC9_epitope_Rep5 1138.5910265906998 1138.58992993586 91.788 2 0.10958043091543115 0.0016214572847346553 0.00763633261666809 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 101858 12918 SLPKGVVEV True PC9_epitope_Rep5 926.54368247546 926.54258993586 54.7 2 0.10957931911838646 0.0016214572847346553 0.007636525247709938 ['ENSG00000149257|ENST00000358171|SERPINH1'] 54999 16782 KYQIINEEF True PC9_epitope_Rep2 1182.5920892198599 1182.59098993586 69.8 2 0.10957384398712072 0.0016214572847346553 0.007637473942804444 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 34787 20071 GQGEVLVYV True PC9_epitope_Rep5 962.5072969667398 962.50618993586 82.256 2 0.10957205149882852 0.0016214572847346553 0.007637784558250299 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 25715 8895 FESIIKEAA True H1975_Epitope_Rep1 1006.5335117145798 1006.53240993586 39.119 2 0.10957109590471065 0.0016214572847346553 0.007637950155557963 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5'] 70796 10588 LYAPYSTHF True NCI_RA007_Epitope_Rep3 1097.51819600361 1097.5170899358602 48.699 2 0.10956481359067302 0.0016538967833395215 0.007639038919941725 ['ENSG00000013588|ENST00000014914|GPRC5A'] 71848 14971 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51432993586 62.829 2 0.10955861962627876 0.0016538967833395215 0.00764011251960574 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 77612 5883 NTEEEGLKY True H1975_Epitope_Rep1 1081.4927691014097 1081.49166993586 27.699 2 0.10955514645689855 0.0016538967833395215 0.007640714587751275 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 111761 22617 TIITTLENL True PC9_epitope_Rep1 1016.57537652656 1016.57426993586 91.805 2 0.10955307058368904 0.0016538967833395215 0.007641074458815861 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 107014 11194 SVFGTMPLK True NCI_RA007_Epitope_Rep1 978.5208388558999 978.51974993586 47.542 2 0.10955033479857038 0.0016538967833395215 0.007641548756490034 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 47865 10146 IYIAGHPAF True NCI_RA007_Epitope_Rep3 987.51780208079 987.51670993586 46.998 2 0.10955028918209202 0.0016538967833395215 0.00764155666517012 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 41030 20368 HTILDLPAV True PC9_epitope_Rep3 977.55458151233 977.55348993586 83.595 2 0.10954019101117714 0.0016538967833395215 0.007643307613233359 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 17596 7797 EHINEGETAM[Oxidation]L True PC9_epitope_Rep6 1258.5499670881397 1258.54886993586 39.378 2 0.10953886797420408 0.0016538967833395215 0.007643537046770677 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 8308 17995 ATINEVVQV True PC9_epitope_Rep1 971.52876068731 971.52766993586 74.01 2 0.10953697887052108 0.0016538967833395215 0.007643864655908546 ['ENSG00000171940|ENST00000371471|ZNF217'] 45712 15464 IRPENVIIY True PC9_epitope_Rep4 1115.6338944621898 1115.63278993586 67.411 2 0.1095354374211656 0.0016538967833395215 0.007644131984742748 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 46618 8576 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51200993586 37.941 2 0.1095329452937676 0.0016538967833395215 0.007644564205864787 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 84899 5747 QEAVTRLEA True H1975_Epitope_Rep2 1015.5298233164699 1015.52872993586 27.103 2 0.10952761705883497 0.0016538967833395215 0.007645488385389695 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 111895 14864 TIPEAFRGV True PC9_epitope_Rep2 988.5341804209198 988.53308993586 62.437 2 0.10952393516257689 0.0016538967833395215 0.007646127071421974 ['ENSG00000213719|ENST00000375784|CLIC1'] 75779 14539 NLLSVAYK True PC9_epitope_Rep5 906.5174677276199 906.51636993586 60.922 2 0.10952104149957648 0.0016538967833395215 0.007646629061491332 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 11981 16770 DHNYQSYIL True PC9_epitope_Rep4 1151.52473793603 1151.52364993586 72.473 2 0.109517444177538 0.0016538967833395215 0.007647253166105988 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 12043 14583 DHSPDSLPL True PC9_epitope_Rep5 979.46107505031 979.45996993586 61.095 2 0.10951311488437686 0.0016538967833395215 0.0076480043267159285 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 140990 15045 YSHGPIAVL True PC9_epitope_Rep5 955.5127167003499 955.51160993586 62.874 2 0.10951282458581905 0.0016538967833395215 0.007648054697960358 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 111411 18351 THSLPVVVI True PC9_epitope_Rep5 963.5753169569099 963.57420993586 75.604 2 0.1095106788607531 0.0016538967833395215 0.007648427024053651 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 7513 14582 ASDMLQLEY True H1975_Epitope_Rep2 1068.4797618895598 1068.47917496793 61.246 1 0.10950942181134349 0.0016538967833395215 0.007648645155332811 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 109892 11149 TEFLFHTA True NCI_RA007_Epitope_Rep4 964.46543215476 964.46432993586 49.758 2 0.10950865932283438 0.0016538967833395215 0.007648777470160294 ['ENSG00000065308|ENST00000182527|TRAM2'] 129188 10580 VQSNRILGV True PC9_epitope_Rep2 984.5716285587998 984.57052993586 46.013 2 0.10950513657470695 0.0016538967833395215 0.007649388802265721 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 31646 10394 GEFQSFSSA True NCI_RA007_Epitope_Rep2 958.4032258210199 958.40267496793 45.021 1 0.10950499790584685 0.0016538967833395215 0.007649412867604912 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 47200 4439 IVAGTLTNK True NCI_RA007_Epitope_Rep3 915.53893144819 915.53782993586 24.259 2 0.10950430474760661 0.0016538967833395215 0.0076495331631077496 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 78490 8625 NYNNQSSNF True PC9_epitope_Rep5 1086.4366512076201 1086.43554993586 38.119 2 0.10949876516867918 0.0016538967833395215 0.007650494605853022 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 49464 9076 KEYLQGLEA True H1975_Epitope_Rep2 1049.5393253710097 1049.53822993586 39.863 2 0.10948933433497882 0.0016798252981689904 0.007652131678772669 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000475705.1_1_6:32086681-32087735:-|nuORF'] 96536 21885 SADTTILFV True PC9_epitope_Rep1 965.50696261357 965.50586993586 88.993 2 0.10948249960845856 0.0016798252981689904 0.007653318312009777 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 98875 10236 SGVHTFPAVLQ True NCI_RA007_Epitope_Rep3 1154.6084079903399 1154.60730993586 47.34 2 0.1094818384854036 0.0016798252981689904 0.007653433104466667 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3', 'CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 7241 17291 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 71.326 2 0.10948054334045405 0.0016798252981689904 0.007653657988559949 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 62945 7361 LLPEYGGTK True NCI_RA007_Epitope_Rep1 976.5229470308799 976.52184993586 32.628 2 0.10948038733816857 0.0016798252981689904 0.0076536850766403715 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000465573.1_1_2:198365552-198367980:+|nuORF', 'ENST00000550617.1_1_12:102267096-102267252:-|nuORF'] 134156 13859 VYLPGSRQTL True PC9_epitope_Rep1 1132.62405805448 1132.62296993586 58.149 2 0.1094734925092234 0.0016798252981689904 0.007654882380353206 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 14214 10185 DSESSGVLY True H1975_Epitope_Rep2 955.41345615155 955.4129049679301 44.178 1 0.10947067489348512 0.0016798252981689904 0.007655371718226841 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3'] 113998 11214 TPAPHSPWTA True PC9_epitope_Rep3 1063.50869394907 1063.50758993586 48.143 2 0.10946856767246435 0.0016798252981689904 0.007655737700962462 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 49318 5194 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 25.072 2 0.10946010856323653 0.0016798252981689904 0.007657207051579489 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 124758 18443 VHDEGVWAL True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 75.731 2 0.10945673737252505 0.0016798252981689904 0.007657792704672776 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 102878 9706 SPAGPILSIR True H1975_Epitope_Rep3 1009.59202965021 1009.59092993586 42.356 2 0.10945209721128099 0.0016798252981689904 0.007658598877817464 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 142715 20452 YYQEYPMSI True PC9_epitope_Rep5 1192.5110620178398 1192.51047496793 83.705 1 0.10944792601167612 0.0016798252981689904 0.007659323644414392 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 114029 5885 TPASPPRVSA True PC9_epitope_Rep3 981.52434401321 981.52324993586 27.701 2 0.10944588645519292 0.0016798252981689904 0.007659678051582211 ['ENST00000513117.1_1_5:6633573-6668378:+|nuORF'] 87526 13168 QQIGNAKISL True PC9_epitope_Rep5 1070.6084079903399 1070.60730993586 55.655 2 0.10943791687792245 0.0016798252981689904 0.007661063051313262 ['ENSG00000100625|ENST00000216513|SIX4'] 114316 22578 TPQSIFIFA True PC9_epitope_Rep2 1022.5436824754598 1022.5425899358601 92.345 2 0.10943768305632585 0.0016798252981689904 0.007661103689850945 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 84946 8597 QEEISAEVAA True H1975_Epitope_Rep2 1045.4927691014097 1045.49166993586 38.022 2 0.10942508357961753 0.0016798252981689904 0.0076632938054812215 ['ENST00000463912.5_1_7:139083347-139097327:+|nuORF', 'nc|ENSG00000269955|Q9Y383-3|LUC7L2', 'nc|ENSG00000269955|Q9Y383-2|LUC7L2', 'ENSG00000146963|ENST00000354926|LUC7L2', 'nc|ENSG00000164898|Q96HJ9-2|FMC1'] 104508 18715 SQMPTVIYV True PC9_epitope_Rep6 1036.5263181591597 1036.5252299358601 84.63 2 0.10942283953578022 0.0016798252981689904 0.007663683941928272 ['ENSG00000121931|ENST00000369763|LRIF1'] 7506 12421 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep2 1084.4746768895598 1084.47356993586 52.863 2 0.10942260790836063 0.0016798252981689904 0.0076637242124207305 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 40152 12312 HQDLSTPVL True PC9_epitope_Rep4 1008.52400966004 1008.52290993586 55.17 2 0.10941490939279606 0.0016798252981689904 0.007665062784339417 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 84204 21572 PYLDSFYEY True PC9_epitope_Rep2 1195.5073565363898 1195.50624993586 88.448 2 0.10941424829086954 0.0016798252981689904 0.007665177743326778 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 105283 8183 SRLSSDTTL True PC9_epitope_Rep5 978.4981888350201 978.49708993586 36.416 2 0.10941276172655354 0.0016798252981689904 0.0076654362480203285 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 95726 15329 RYGLVTNEI True PC9_epitope_Rep1 1063.56620882519 1063.5651099358602 63.782 2 0.10941274355674388 0.0016798252981689904 0.007665439407694278 ['ENSG00000115267|ENST00000649979|IFIH1'] 1151 7683 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 34.505 2 0.10941002925432657 0.0016798252981689904 0.007665911430661364 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 105707 13221 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.45847496793 55.951 1 0.10940396788288019 0.0016798252981689904 0.007666965617440792 ['ENSG00000115758|ENST00000234111|ODC1'] 71294 14978 LYQDHMQYI True PC9_epitope_Rep2 1209.54884450889 1209.54774993586 62.869 2 0.10939547086870366 0.0016798252981689904 0.00766844364421829 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 47804 21000 IYGEGFQTW True PC9_epitope_Rep3 1099.4974605590298 1099.49636993586 86.052 2 0.10938532173035628 0.0016798252981689904 0.007670209413184784 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 129636 13502 VRPGTALEL True PC9_epitope_Rep1 954.5498304850599 954.54872993586 56.791 2 0.10938310977498913 0.0016798252981689904 0.0076705943060836074 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 115773 13222 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45507496793 55.986 1 0.10937329660677256 0.0016798252981689904 0.007672302078585043 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 76943 7469 NRDRTQIAL True PC9_epitope_Rep5 1085.59415490853 1085.59304993586 33.682 2 0.10935368251080835 0.0016798252981689904 0.0076757165943791795 ['ENSG00000241685|ENST00000262942|ARPC1A'] 34830 14457 GQIGMIQAL True NCI_RA007_Epitope_Rep5 929.5004377644899 929.49934993586 62.291 2 0.10934980851568468 0.0016798252981689904 0.0076763911716170065 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A2|p.G861C|1|0.16|ENSG00000018625|chr1:160136587-160136587|G/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENSG00000132681|ENST00000368081|ATP1A4'] 135094 17531 WEDNIIWDA True H1975_Epitope_Rep2 1160.51383889916 1160.51274993586 72.736 2 0.10934537826330386 0.0016798252981689904 0.007677162679916308 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.E1748Rfs*44|1|0.18|ENSG00000122728|chr9:32630339-32630339|T/-|frameshift_variant', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 93523 13627 RQLEDTVAL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 57.48 2 0.10934473976872457 0.0016798252981689904 0.007677273877019093 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 116226 12662 TTDDPALLY True H1975_Epitope_Rep1 1007.4811417885498 1007.48057496793 53.759 1 0.10933991635397337 0.0016798252981689904 0.007678113949694494 ['ENSG00000182749|ENST00000675840|PAQR7'] 11894 16171 DHIQITAL True PC9_epitope_Rep5 909.49198125577 909.49088993586 67.191 2 0.10933661924970886 0.0016798252981689904 0.0076786882427690595 ['ENSG00000089723|ENST00000203664|OTUB2'] 35151 8710 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 40.169 2 0.1093343511078465 0.0016798252981689904 0.00767908333418848 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 139075 15163 YLDDPTNSWY True H1975_Epitope_Rep2 1272.52988288612 1272.52878993586 63.479 2 0.10932960638683217 0.0016798252981689904 0.007679909888583824 ['ENSG00000064195|ENST00000434704|DLX3'] 39089 5539 HHTTQQTFL True PC9_epitope_Rep2 1111.54105670651 1111.53994993586 26.697 2 0.1093196859635376 0.0016798252981689904 0.007681638354237437 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 132197 17199 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 70.975 2 0.10931739562608733 0.0016798252981689904 0.007682037460125412 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 116607 23010 TVADVVLWSV True PC9_epitope_Rep5 1087.59136094387 1087.59077496793 93.498 1 0.10931135282752086 0.0016798252981689904 0.007683090552419777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 7384 4815 ARSTDQTVL True PC9_epitope_Rep4 989.51417325233 989.51306993586 25.098 2 0.10931058581243908 0.0016798252981689904 0.007683224231862953 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 140166 16263 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51748993586 67.374 2 0.10930921347842601 0.0016798252981689904 0.00768346341509637 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 25462 7177 FEELDRPAA True H1975_Epitope_Rep2 1046.50327421546 1046.5021699358601 32.541 2 0.10930591690140488 0.0016798252981689904 0.007684038002830908 ['ENSG00000150990|ENST00000308736|DHX37'] 28474 11533 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44417496793 49.345 1 0.10930362442046822 0.0016798252981689904 0.007684437602807726 ['ENSG00000170779|ENST00000336219|CDCA4'] 42399 7412 IEDGKAVIP True H1975_Epitope_Rep2 940.5229470308799 940.52184993586 33.453 2 0.1092979296712785 0.0016798252981689904 0.007685430335519912 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK'] 100623 22311 SLDDLLTNV True PC9_epitope_Rep1 988.5076908895601 988.50658993586 90.631 2 0.10928828169819972 0.0016798252981689904 0.007687112493682097 ['ENSG00000143819|ENST00000272167|EPHX1'] 6643 19500 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 80.238 2 0.10928727595092375 0.0016798252981689904 0.007687287869741084 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 118141 20896 TYIPGTQITF True PC9_epitope_Rep4 1139.58627556343 1139.5851699358602 88.535 2 0.10928693842991795 0.0016798252981689904 0.00768734672545612 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 53010 11824 KPIEELQNV True PC9_epitope_Rep3 1068.58152453616 1068.5804299358601 50.498 2 0.10928275462147716 0.0016798252981689904 0.007688076319266841 ['ENSG00000166920|ENST00000396650|C15orf48'] 24802 6571 FATHAAALSVR True PC9_epitope_Rep6 1142.6196413803798 1142.61799490379 33.977 3 0.10927685278901048 0.0016798252981689904 0.007689105624594486 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 43672 12948 IHDGLTVHL True PC9_epitope_Rep5 1003.54507945779 1003.5439899358599 54.815 2 0.10927587751507686 0.0016798252981689904 0.007689275729440278 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 29695 20796 FVLPELPSV True PC9_epitope_Rep6 999.56408356687 999.5635749679301 92.759 1 0.10927117077143905 0.0016798252981689904 0.00769009671903237 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 97870 10453 SELPVSEVA True H1975_Epitope_Rep3 929.47057710485 929.46948993586 45.268 2 0.10926954209552986 0.0016798252981689904 0.007690380826027656 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 21278 21101 ERDTYMLLL True PC9_epitope_Rep5 1152.58489566444 1152.58378993586 86.23 2 0.10926639205974688 0.0016798252981689904 0.0076909303485306535 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 0 6118 AAAAAAAAAAA True PC9_epitope_Rep1 799.41881631551 799.41770993586 28.347 2 0.10926411699371606 0.0016798252981689904 0.007691327256497011 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 91895 9818 RKLENIVEL True NCI_RA007_Epitope_Rep2 1112.65535818276 1112.6542699358602 42.813 2 0.10925278949516126 0.0016798252981689904 0.007693303746188902 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 74929 20222 NHIQDLISL True PC9_epitope_Rep1 1051.56620882519 1051.5651099358602 82.613 2 0.10924958758854769 0.0016798252981689904 0.0076938625229494 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3190651-3210559:+|nuORF'] 52398 6235 KKMQDTVVL True NCI_RA007_Epitope_Rep4 1060.5950664253198 1060.59396993586 30.588 2 0.10924780078538696 0.0016798252981689904 0.007694174361730703 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 54499 14092 KYIDQKFVL True PC9_epitope_Rep2 1152.6542955536 1152.6531899358602 59.478 2 0.10924750624736305 0.0016798252981689904 0.0076942257666503975 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 25682 5323 FEQGGARVV True H1975_Epitope_Rep3 961.4981292653698 961.49702993586 25.548 2 0.10924620054311904 0.0016798252981689904 0.00769445365165398 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 90914 11006 REYPNLVTI True NCI_RA007_Epitope_Rep3 1103.59750895347 1103.59640993586 50.383 2 0.10924145767293246 0.0016798252981689904 0.007695281481252425 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 72229 10981 MHFESGSTL True PC9_epitope_Rep2 1007.43823143075 1007.43712993586 47.561 2 0.10923847989145155 0.0016798252981689904 0.007695801272872954 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 137600 14639 YEESEVISLP True H1975_Epitope_Rep2 1164.5550350048 1164.5539299358602 61.469 2 0.10923711434429006 0.0016798252981689904 0.007696039649582105 ['ENSG00000112996|ENST00000507110|MRPS30'] 18782 9205 ELDDTLKY True H1975_Epitope_Rep2 995.4811417885501 995.48004993586 40.36 2 0.1092370103433807 0.0016798252981689904 0.007696057804790804 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 104282 15916 SQIHDIVLV True PC9_epitope_Rep4 1022.5760452328999 1022.5754749679301 69.147 1 0.10923531386291374 0.0016798252981689904 0.007696353961475287 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 2193 13967 AELYGPFTSA True H1975_Epitope_Rep2 1054.49712620586 1054.49657496793 58.872 1 0.10923393887547456 0.0016798252981689904 0.007696594002803674 ['ENSG00000169217|ENST00000305596|CD2BP2'] 118619 21598 TYSIGFLRF True PC9_epitope_Rep2 1102.5811306133398 1102.58002993586 88.551 2 0.10923003626469381 0.0016798252981689904 0.007697275348697331 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 86252 19287 QIPQVLNQV True PC9_epitope_Rep2 1037.58694426977 1037.58584993586 79.562 2 0.10921706728225812 0.0016798252981689904 0.007699539985624673 ['ENSG00000205339|ENST00000379719|IPO7'] 61059 9090 LIGEYGLR True NCI_RA007_Epitope_Rep5 919.5127167003499 919.51160993586 41.62 2 0.10920934279838089 0.0016798252981689904 0.007700889136796421 ['ENSG00000170889|ENST00000302907|RPS9', 'ENST00000460761.1_1_19:54705052-54705521:+|nuORF'] 5133 19712 ALLPELREV True PC9_epitope_Rep5 1038.6073453611798 1038.6062499358602 80.867 2 0.10920717423998952 0.0016798252981689904 0.007701267936242916 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 65404 15993 LREPLPATL True PC9_epitope_Rep1 1008.59678067748 1008.59568993586 66.327 2 0.10920662665573025 0.0016798252981689904 0.007701363590013492 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 3985 15538 AHDVDPIEL True PC9_epitope_Rep3 1007.4923751785899 1007.49126993586 64.916 2 0.10918723396069854 0.0016798252981689904 0.007704751908186785 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 3949 15207 AHDGSVFTL True PC9_epitope_Rep2 945.4555957470501 945.45448993586 63.756 2 0.10918508094836907 0.0016798252981689904 0.007705128174244964 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'EML4-ALK|7|fusion', 'EML4-ALK|6|fusion'] 74253 5631 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 26.728 2 0.10918057690173139 0.0016798252981689904 0.007705915370608242 ['ENSG00000167658|ENST00000309311|EEF2'] 9859 13155 AYLHTTTTF True PC9_epitope_Rep1 1053.51311062317 1053.51200993586 55.465 2 0.10917988290174552 0.0016798252981689904 0.007706036671611574 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 77296 11247 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46578993586 48.305 2 0.10915376169698913 0.0016798252981689904 0.007710603615974027 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 49946 15858 KILPTLEAV True PC9_epitope_Rep6 982.60628273202 982.60518993586 73.27 2 0.10915173353636416 0.0016798252981689904 0.007710958322177271 ['ENSG00000143621|ENST00000361891|ILF2'] 133123 21138 VVQPLLVSV True PC9_epitope_Rep1 952.5957180483199 952.59516496793 86.137 1 0.10913523209453399 0.0016798252981689904 0.0077138448549133164 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 42854 15046 IEQPTPFLP True H1975_Epitope_Rep2 1040.5542471591598 1040.5531499358601 63.026 2 0.10912614605064055 0.0016798252981689904 0.007715434686623171 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 105182 13560 SRGDFVVEY True PC9_epitope_Rep4 1070.50327421546 1070.5021699358601 60.054 2 0.10912221600932374 0.0016798252981689904 0.007716122444166745 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 140660 15695 YRTDMIQAL True PC9_epitope_Rep4 1109.55392988933 1109.55282993586 68.296 2 0.10912115447817315 0.0016798252981689904 0.007716308222360457 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 61026 6798 LIEVDDER True NCI_RA007_Epitope_Rep1 987.4872897981498 987.48618993586 30.45 2 0.10911894230817304 0.0016798252981689904 0.007716695387338735 ['ENSG00000137154|ENST00000380394|RPS6'] 96496 8755 SADETWDSA True NCI_RA007_Epitope_Rep1 980.37231961556 980.37177496793 38.057 1 0.10911530794376206 0.0016798252981689904 0.007717331499724745 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 114968 15011 TQWERPVSI True PC9_epitope_Rep5 1114.5771078620598 1114.5760099358602 62.743 2 0.10911001571383047 0.0016798252981689904 0.007718257874139958 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 92871 6697 RPFQGTM[Oxidation]GV True PC9_epitope_Rep2 1007.4858507099498 1007.48474993586 31.167 2 0.10910545749329208 0.0016798252981689904 0.00771905585053006 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 55110 6665 LAAARLAAA True PC9_epitope_Rep6 826.5024863698198 826.50138993586 34.377 2 0.10910305894328597 0.0016798252981689904 0.007719475780219078 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 76766 8654 NQWDGTQHGV True PC9_epitope_Rep5 1140.49483479008 1140.49372993586 38.231 2 0.1090993595524891 0.0016798252981689904 0.007720123499796624 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 9624 20404 AYANIISQF True PC9_epitope_Rep4 1025.5181960036098 1025.51767496793 86.631 1 0.10909425634434415 0.0016798252981689904 0.00772101709734759 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 129324 15272 VQYGNVPAV True PC9_epitope_Rep5 945.4919812557698 945.49088993586 63.753 2 0.10908999539690949 0.0016798252981689904 0.007721763287323269 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462', 'ENST00000497489.5_1_9:109691986-109693263:+|nuORF'] 31788 8894 GEIENQITAA True H1975_Epitope_Rep2 1044.50875351872 1044.5076499358602 39.182 2 0.10908808242274588 0.0016798252981689904 0.007722098315788765 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 39067 7420 HHSNLIAGM True PC9_epitope_Rep4 978.47053461854 978.46942993586 35.889 2 0.10907521945362736 0.0016798252981689904 0.00772435143474637 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 88164 7834 QRVDSPVTV True PC9_epitope_Rep6 999.5349086969098 999.53380993586 39.529 2 0.10907436933152408 0.0016798252981689904 0.007724500367230851 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 751 15397 AAVPGKTFVNI True PC9_epitope_Rep2 1115.63389446219 1115.63278993586 64.506 2 0.10907067673551883 0.0016798252981689904 0.007725147303547411 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 104023 17240 SQDLVYETV True PC9_epitope_Rep2 1052.50260550912 1052.5015099358602 71.575 2 0.10906442949607041 0.0016798252981689904 0.007726241928065048 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 141463 15596 YTGTPDWLY True H1975_Epitope_Rep1 1114.4971262058598 1114.49657496793 65.275 1 0.10906082388969593 0.0016798252981689904 0.0077268737609132564 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 2442 11647 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.5067449679301 49.87 1 0.10905593984615232 0.0016798252981689904 0.0077277297018524555 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 125276 17476 VILPKFTAV True PC9_epitope_Rep6 986.6164534929 986.61534993586 79.845 2 0.10905540187170312 0.0016798252981689904 0.007727823988829641 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 17866 15053 EHVPGADIL True PC9_epitope_Rep5 949.4868958753299 949.48578993586 62.907 2 0.10905285710145676 0.0016798252981689904 0.007728270007773934 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 138571 7249 YIDEQFER True H1975_Epitope_Rep1 1098.4981888350198 1098.49708993586 32.893 2 0.10904442355954316 0.0016798252981689904 0.007729748322681814 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 132061 6421 VTTGGMVLK True NCI_RA007_Epitope_Rep4 904.5051887917599 904.50408993586 31.299 2 0.1090360847914392 0.0016798252981689904 0.00773121029323897 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 102857 12479 SPAAPVITA True PC9_epitope_Rep1 825.45961849833 825.4590749679301 52.868 1 0.1090347507801609 0.0016798252981689904 0.00773144419971213 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 101264 22110 SLIADLEQL True PC9_epitope_Rep4 1000.5440763982799 1000.54296993586 93.263 2 0.1090316121439626 0.0016798252981689904 0.007731994557344147 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 5214 8120 ALPDQGIAKA True PC9_epitope_Rep2 982.5447451046199 982.54364993586 36.592 2 0.10902913697783417 0.0016798252981689904 0.007732428602656298 ['ENSG00000089289|ENST00000356413|IGBP1'] 6962 13361 AQLAHIQAL True PC9_epitope_Rep5 963.55016483823 963.54906993586 56.407 2 0.10902545941617972 0.0016798252981689904 0.007733073543594763 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 40257 18679 HQLALISQL True PC9_epitope_Rep2 1021.59202965021 1021.59092993586 77.215 2 0.10902067912989942 0.0016798252981689904 0.007733911949096121 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 101852 13032 SLPKGVVEV True PC9_epitope_Rep3 926.54368247546 926.54258993586 55.154 2 0.10901683998583189 0.0016798252981689904 0.007734585352986731 ['ENSG00000149257|ENST00000358171|SERPINH1'] 13274 20082 DLTDYLMK True PC9_epitope_Rep2 997.47903361357 997.47792993586 82.653 2 0.1090152690361718 0.0016798252981689904 0.007734860921258817 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 95728 13385 RYGLVTNEI True PC9_epitope_Rep4 1063.56620882519 1063.5651099358602 59.388 2 0.10900953919925022 0.0016798252981689904 0.007735866101474734 ['ENSG00000115267|ENST00000649979|IFIH1'] 8327 4216 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 22.753 2 0.10899971024760471 0.0016798252981689904 0.00773759067960212 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 90998 13678 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54470993586 64.398 2 0.10899870631596133 0.0016798252981689904 0.007737766849354017 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 103699 5324 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 27.194 2 0.10899726939946508 0.0016798252981689904 0.007738019005953858 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 88495 22182 QSVDLVFPV True PC9_epitope_Rep5 1002.5385970950199 1002.53750993586 90.351 2 0.1089960768342132 0.0016798252981689904 0.007738228288719938 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 6118 15050 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 62.707 2 0.10899599264662753 0.0016798252981689904 0.007738243062969928 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 110107 3761 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep3 1063.39504666987 1063.39394993586 19.549 2 0.10898121234813209 0.0016798252981689904 0.007740837309800005 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 43533 8886 IGPLGLSPK True H1975_Epitope_Rep1 880.5382031722 880.53710993586 39.092 2 0.10898113409400104 0.0016798252981689904 0.0077408510472470665 ['ENSG00000197958|ENST00000361436|RPL12'] 96945 11985 SAVTNIPHV True PC9_epitope_Rep5 936.50288029264 936.50178993586 51.096 2 0.1089803308222604 0.0016798252981689904 0.0077409920622887075 ['TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 62382 19525 LLGPRLVLA True PC9_epitope_Rep5 950.6276868829399 950.62658993586 80.155 2 0.10897795297657763 0.0016798252981689904 0.007741409509676501 ['ENSG00000170348|ENST00000303575|TMED10'] 32229 6222 GEYGRTVVP True NCI_RA007_Epitope_Rep3 976.4977949121999 976.49668993586 31.479 2 0.10897758921758269 0.0016798252981689904 0.007741473372021575 ['ENSG00000167972|ENST00000301732|ABCA3'] 6114 14631 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 61.101 2 0.108963635974465 0.0016798252981689904 0.007743923418805679 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 52830 12041 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 51.175 2 0.10895691252102904 0.0016798252981689904 0.0077451042558146065 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 109167 18771 TAM[Oxidation]DVVYAL True PC9_epitope_Rep4 997.4790339940099 997.47792993586 80.285 2 0.10895417727282371 0.0016798252981689904 0.007745584695951041 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 10009 22218 AYQLMTDVF True PC9_epitope_Rep1 1086.50558271458 1086.5044899358602 90.284 2 0.10893613264232123 0.0016798252981689904 0.007748754915676057 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 5196 15620 ALNDKFASL True PC9_epitope_Rep1 977.51819600361 977.51708993586 64.901 2 0.10893350585124363 0.0016798252981689904 0.007749216515049394 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'CON__Q0VBK2'] 128091 21876 VPLEFPVVA True PC9_epitope_Rep5 969.5535188831699 969.55242993586 89.183 2 0.1089067578303337 0.0016798252981689904 0.007753918389595112 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 21275 21180 ERDTYMLLL True PC9_epitope_Rep1 1152.58489566444 1152.58378993586 86.303 2 0.10890156593548848 0.0016798252981689904 0.007754831360967785 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 129314 10314 VQWKVDNAL True NCI_RA007_Epitope_Rep3 1071.5712942056298 1071.57018993586 47.637 2 0.10889831638912015 0.0016798252981689904 0.007755402831911871 ['nc|ENSG00000211592|P01834|IGKC'] 17380 7728 EHDPHVLLA True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 37.114 2 0.10888276500218538 0.0016798252981689904 0.007758138289290299 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 97421 11122 SEEDPVTSIP True H1975_Epitope_Rep2 1072.49243474824 1072.4913299358602 47.816 2 0.10888181432330062 0.0016798252981689904 0.007758305541993421 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 40862 13645 HSEQVFAL True PC9_epitope_Rep4 929.4606811274899 929.45958993586 60.378 2 0.10886599716109704 0.0016798252981689904 0.007761088762430405 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 96188 10223 RYPDSHQLF True PC9_epitope_Rep4 1161.55670677065 1161.5550749037902 47.0 3 0.10885822534211695 0.0016798252981689904 0.007762456660962226 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 11994 4700 DHQQNSPTL True PC9_epitope_Rep4 1038.47303671634 1038.47192993586 24.62 2 0.10884555777154813 0.0016798252981689904 0.007764686747587108 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.E121Q|1|0.18|ENSG00000173614|chr1:9981092-9981092|G/C|missense_variant'] 131573 20951 VTLGPVPEI True PC9_epitope_Rep3 923.53278343859 923.53168993586 85.866 2 0.10884498773576332 0.0016798252981689904 0.007764787115170069 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 87355 4937 QPSQPVTSA True PC9_epitope_Rep1 913.4505103666099 913.44940993586 23.852 2 0.10884153244936316 0.0016798252981689904 0.00776539552263949 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 21411 15885 ERINNINIL True PC9_epitope_Rep4 1097.61930702721 1097.61820993586 69.032 2 0.10884126046890003 0.0016798252981689904 0.0077654434149642335 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 124744 11411 VHAQIVSTL True PC9_epitope_Rep2 966.5498304850599 966.54872993586 49.214 2 0.10884054483815271 0.0016798252981689904 0.0077655694298638354 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 54411 16770 KYFLKPEVL True PC9_epitope_Rep3 1135.6641319613097 1135.66302993586 69.652 2 0.10883969294284405 0.0016798252981689904 0.007765719442065884 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 39847 19874 HPAAFPLPVV True PC9_epitope_Rep2 1046.59130137422 1046.59020993586 81.839 2 0.10883384744968398 0.0016798252981689904 0.007766748863869906 ['ENSG00000108523|ENST00000262482|RNF167'] 52496 7538 KKWTSVIRL True NCI_RA007_Epitope_Rep3 1129.69716342509 1129.69552490379 36.772 3 0.10883054921751249 0.0016798252981689904 0.007767329757892755 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 40794 6074 HRYGDGGSTF True PC9_epitope_Rep1 1095.4733710695098 1095.4722699358601 28.177 2 0.10882839070519741 0.0016798252981689904 0.007767709943928911 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF'] 76899 14859 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.54978993586 61.975 2 0.10881734808866705 0.0017085592245769674 0.007769655198269871 ['ENSG00000013523|ENST00000251089|ANGEL1'] 98759 10151 SGHLETVIL True H1975_Epitope_Rep1 967.5338460677499 967.53274993586 43.985 2 0.10881605952824283 0.0017085592245769674 0.007769882220205937 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 142691 7466 YYPTEDVPR True NCI_RA007_Epitope_Rep5 1138.5294889632999 1138.52838993586 35.4 2 0.10881297285172255 0.0017085592245769674 0.0077704260649759365 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 33899 9470 GLQFPVGR True H1975_Epitope_Rep3 872.4868363056798 872.48572993586 41.43 2 0.10881043651024733 0.0017085592245769674 0.0077708729731498635 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 114810 19895 TQLGPPYHILV True PC9_epitope_Rep5 1236.68665831104 1236.68556993586 81.579 2 0.10880555814311829 0.0017085592245769674 0.007771732620464178 ['ENSG00000119616|ENST00000341162|FCF1'] 77602 6428 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.4608649679301 29.645 1 0.10880509540235016 0.0017085592245769674 0.007771814167651977 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 31443 8480 GEALASISHVA True H1975_Epitope_Rep3 1053.54547338061 1053.54436993586 37.603 2 0.10878832049362257 0.0017085592245769674 0.00777477090913069 ['ENSG00000076242|ENST00000231790|MLH1', 'ENST00000539477.5_1_3:37035370-37053334:+|nuORF', 'ENST00000466900.5_1_3:37035370-37047454:+|nuORF'] 26899 21678 FLDGNELTL True PC9_epitope_Rep5 1020.51277627 1020.51227496793 88.432 1 0.10878619992905116 0.0017085592245769674 0.007775144756671713 ['ENSG00000213719|ENST00000375784|CLIC1'] 111068 15622 THDITTISI True PC9_epitope_Rep5 999.52367530687 999.52317496793 65.1 1 0.1087833569648463 0.0017085592245769674 0.007775645987781425 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 14893 12053 DYAEVSNTF True NCI_RA007_Epitope_Rep3 1044.44000525256 1044.43890993586 54.532 2 0.10877684834233231 0.0017085592245769674 0.0077767936132399065 ['ENSG00000186141|ENST00000334163|POLR3C'] 137083 19786 YAQGLLTGV True PC9_epitope_Rep3 920.4967322830399 920.49562993586 81.337 2 0.10877034562778808 0.0017085592245769674 0.007777940360318131 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 117999 19242 TYDRVESLF True PC9_epitope_Rep5 1128.54513902744 1128.5440499358601 79.053 2 0.10876659310720954 0.0017085592245769674 0.007778602187794133 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 43836 13526 IHSPVVNEL True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 56.883 2 0.10876384424592583 0.0017085592245769674 0.007779087035612108 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 126632 15774 VLNEYFHNV True PC9_epitope_Rep2 1133.5505587610498 1133.54946993586 65.938 2 0.10875840981505772 0.0017085592245769674 0.0077800456536491185 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 42838 6477 IEQETPVSA True H1975_Epitope_Rep3 972.4763907612798 972.47584496793 29.882 1 0.10875759585300868 0.0017085592245769674 0.007780189244044463 ['ENST00000395449.7_1_11:47187835-47198404:-|nuORF', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 8171 12097 ATESVSLYY True H1975_Epitope_Rep3 1031.48114178855 1031.48057496793 51.696 1 0.10874770629714856 0.0017085592245769674 0.007781934057138424 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 85382 4601 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 22.802 2 0.10874497481078309 0.0017085592245769674 0.007782416039521227 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 40525 5195 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 27.737 2 0.10874272678251144 0.0017085592245769674 0.007782812735291595 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 86325 13360 QITVNDLPVGR True PC9_epitope_Rep6 1210.6669854956199 1210.6658899358602 63.051 2 0.1087343638613255 0.0017085592245769674 0.007784288660167593 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 35630 12911 GTDELRLLY True H1975_Epitope_Rep3 1078.56587447202 1078.56537496793 54.89 1 0.108730849874027 0.0017085592245769674 0.007784908904637315 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 73483 21761 M[Oxidation]VDGTLLLL True PC9_epitope_Rep4 989.5467196310099 989.54562993586 91.898 2 0.10872969214876033 0.0017085592245769674 0.00778511326206849 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 140048 12648 YQGVNLYVK True PC9_epitope_Rep2 1082.5760452328998 1082.57494993586 53.959 2 0.10872634398047484 0.0017085592245769674 0.007785704297644868 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENST00000490798.5_1_20:43550276-43564067:+|nuORF', 'ENST00000476056.5_1_20:43550276-43561823:+|nuORF'] 121206 12959 VESPVWVSA True H1975_Epitope_Rep2 972.4916469025999 972.49054993586 54.963 2 0.10872372594663209 0.0017085592245769674 0.007786166476385835 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC', 'ENST00000557520.1_1_14:88425979-88431954:-|nuORF', 'nc|ENSG00000054983|P54803-5|GALC'] 11860 18030 DHIEELVSL True PC9_epitope_Rep6 1053.53423999057 1053.5331499358601 81.981 2 0.1087194111465782 0.0017085592245769674 0.00778692825424127 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 76564 22180 NQLDSLMGL True PC9_epitope_Rep1 989.48518162317 989.48408993586 90.135 2 0.10871806250662572 0.0017085592245769674 0.007787166371357152 ['ENSG00000135148|ENST00000412615|TRAFD1'] 8957 20371 AVGELLQEV True PC9_epitope_Rep2 956.51786165044 956.51676993586 83.78 2 0.10871578595230293 0.0017085592245769674 0.007787568337842595 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 117223 19411 TVLNVEGDAL True PC9_epitope_Rep2 1029.5342399905699 1029.5331499358601 80.043 2 0.10871491294817742 0.0017085592245769674 0.007787722487688855 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 26988 20837 FLEKLLPPV True PC9_epitope_Rep2 1054.6426682407398 1054.6415699358602 85.595 2 0.1087132388293222 0.0017085592245769674 0.007788018101824126 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 114525 12307 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.47578496793 52.363 1 0.1087122455717658 0.0017085592245769674 0.007788193495313137 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 124769 18380 VHDEGVWAL True PC9_epitope_Rep5 1024.4977949121999 1024.49727496793 75.717 1 0.1087098583517773 0.0017085592245769674 0.007788615055999229 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 77133 20021 NRNFSNFIL True PC9_epitope_Rep5 1123.57744221523 1123.5763499358602 82.062 2 0.10870971530832525 0.0017085592245769674 0.007788640316832452 ['ENSG00000138061|ENST00000610745|CYP1B1'] 132519 10753 VVDPNDPQM True PC9_epitope_Rep1 1013.44879611445 1013.44768993586 46.249 2 0.10870914225648622 0.0017085592245769674 0.007788741516014927 ['ENSG00000151883|ENST00000281631|PARP8'] 47430 8609 IVLQIDNAR True NCI_RA007_Epitope_Rep5 1040.5978433066398 1040.59674993586 39.791 2 0.10870435608491111 0.0017085592245769674 0.007789586788698869 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 110352 7786 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 34.904 2 0.1087015402963413 0.0017085592245769674 0.007790084118806983 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 40169 19232 HQDSTWIVL True PC9_epitope_Rep4 1097.55055876105 1097.54946993586 82.076 2 0.1087001311609511 0.0017085592245769674 0.00779033301457794 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 69640 19093 LVDQNIFSFY True H1975_Epitope_Rep2 1244.607739284 1244.60664993586 79.251 2 0.10869105588693272 0.0017085592245769674 0.0077919361654088 ['ENSG00000117984|ENST00000236671|CTSD'] 58074 9328 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 40.841 2 0.10869038850987657 0.0017085592245769674 0.0077920540704090975 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 77988 21074 NVPEGLLATV True PC9_epitope_Rep1 1011.56006081559 1011.55896993586 85.894 2 0.10868589723371824 0.0017085592245769674 0.007792847585581099 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 49105 9670 KEIFQTTVP True H1975_Epitope_Rep3 1061.57571087973 1061.57460993586 42.215 2 0.1086833253006491 0.0017085592245769674 0.007793302027844868 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 39139 9294 HHYSGNNIEL True PC9_epitope_Rep1 1182.5417849825 1182.54013490379 40.604 3 0.10868100571351719 0.0017085592245769674 0.007793711904323089 ['ENSG00000156482|ENST00000287038|RPL30'] 77849 11017 NVELDPEIQ True NCI_RA007_Epitope_Rep5 1055.51350454599 1055.51297496793 49.011 1 0.10867592385425139 0.0017085592245769674 0.007794609953509192 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 104853 7055 SRAPSTYTY True PC9_epitope_Rep5 1044.48762415132 1044.48652993586 32.105 2 0.10867040686529546 0.0017085592245769674 0.007795585010472535 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3', 'nc|ENSG00000130363|Q86UC2-2|RSPH3'] 11693 11364 DGYDYDGYR True PC9_epitope_Rep1 1122.42541781758 1122.4243299358602 48.592 2 0.10866949779189827 0.0017085592245769674 0.007795745688824847 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 8108 12257 ATDYTFAM[Oxidation]Y True H1975_Epitope_Rep3 1097.43756310485 1097.43697496793 52.324 1 0.10863591788003832 0.0017085592245769674 0.007801683165651388 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 76657 10954 NQSDTSVSL True PC9_epitope_Rep1 949.43525422529 949.43414993586 47.022 2 0.10862969393104056 0.0017085592245769674 0.00780278414100481 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 9619 21098 AYANIISQF True PC9_epitope_Rep2 1025.5181960036098 1025.5170899358602 86.612 2 0.10862810903966252 0.0017085592245769674 0.007803064521754243 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 95278 11667 RVPKTLVLV True PC9_epitope_Rep4 1023.6804507317898 1023.6793499358599 52.637 2 0.1086271410019556 0.0017085592245769674 0.007803235780633874 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 8173 9356 ATETQPIVY True H1975_Epitope_Rep1 1020.5127762699997 1020.51227496793 40.895 1 0.1086268286501056 0.0017085592245769674 0.007803291040648157 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 62133 4943 LLEGEESR True PC9_epitope_Rep3 931.4610750503099 931.45996993586 24.106 2 0.1086260631519243 0.0017085592245769674 0.007803426471059296 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 7944 4498 ATASPIVAR True NCI_RA007_Epitope_Rep4 884.50796567308 884.50686993586 23.689 2 0.10861352857576576 0.0017085592245769674 0.0078056443861053105 ['IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44'] 104378 20872 SQIYPVVCV True PC9_epitope_Rep5 1006.5157534754599 1006.51464993586 85.337 2 0.10861148194369337 0.0017085592245769674 0.007806006582677281 ['ENSG00000144224|ENST00000272638|UBXN4'] 6679 20660 APYPGFLSV True PC9_epitope_Rep4 949.49091862661 949.48982993586 87.626 2 0.10860588878478258 0.0017085592245769674 0.007806996497966337 ['ENSG00000160447|ENST00000291906|PKN3'] 31642 7831 GEFQEVVRA True NCI_RA007_Epitope_Rep3 1033.5192586327696 1033.5181699358602 37.925 2 0.10860365389530713 0.0017085592245769674 0.007807392077788834 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2', 'ENSG00000178685|ENST00000313028|PARP10', 'ENST00000526007.5_1_8:145051654-145057989:-|nuORF'] 73235 14307 MSDSYLPSYY True H1975_Epitope_Rep3 1224.5008912569601 1224.50037496793 60.378 1 0.10859211465840578 0.0017085592245769674 0.007809434853291507 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 31825 9571 GEIQEKLLSA True NCI_RA007_Epitope_Rep4 1086.5920892198599 1086.59098993586 43.66 2 0.10859098418191825 0.0017085592245769674 0.007809635007766351 ['ENSG00000261150|ENST00000615648|EPPK1'] 128206 13875 VPMTPLRTV True PC9_epitope_Rep3 1012.5739370579199 1012.57282993586 58.452 2 0.10859089372445227 0.0017085592245769674 0.007809651023763783 ['ENSG00000107949|ENST00000278100|BCCIP'] 93700 13843 RQVEDLQATF True PC9_epitope_Rep2 1205.6040508858898 1205.6029499358601 58.53 2 0.10859011404915049 0.0017085592245769674 0.007809789070926794 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 6644 17776 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 76.404 2 0.1085889365257312 0.0017085592245769674 0.007809997564448342 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 137189 12192 YAYDGKDYLA True PC9_epitope_Rep4 1177.5291546101298 1177.52804993586 54.715 2 0.10858580651550334 0.0017085592245769674 0.007810551793442387 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 24378 22950 FAADIISVL True PC9_epitope_Rep5 947.53278343859 947.5322349679301 93.265 1 0.1085811673742104 0.0017085592245769674 0.007811373313197791 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 105164 10196 SRFPQGAQL True PC9_epitope_Rep4 1002.5246783663797 1002.52358993586 46.895 2 0.10857176562860335 0.0017085592245769674 0.007813038471945088 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 33987 12752 GLSTEGIYRV True PC9_epitope_Rep6 1093.57677350889 1093.57566993586 60.537 2 0.10856957404091253 0.0017085592245769674 0.00781342667692354 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 115777 13129 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45507496793 55.748 1 0.1085665579771035 0.0017085592245769674 0.007813960955210388 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 127729 12274 VPAPSPLSA True PC9_epitope_Rep4 837.45961849833 837.4590749679301 55.028 1 0.10856380080228269 0.0017085592245769674 0.00781444940366777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 41539 19286 HYQDVSCLQF True PC9_epitope_Rep1 1238.53900810118 1238.5379099358602 78.986 2 0.10856223957348829 0.0017085592245769674 0.00781472599687841 ['ENSG00000065268|ENST00000585809|WDR18'] 125123 7514 VIFTGGVGK True NCI_RA007_Epitope_Rep4 876.5069030439198 876.50580993586 35.548 2 0.10855704806852239 0.0017085592245769674 0.007815645811546824 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 28433 10875 FSDETNTENLY True H1975_Epitope_Rep2 1331.55174052951 1331.55064993586 46.861 2 0.10855703128769341 0.0017085592245769674 0.007815648784891271 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4', 'MAP3K4|p.G1039Pfs*16|1|0.05|ENSG00000085511|chr6:161091519-161091520|-/CCACTTGGTAAAGGAATTACCAAATATA|frameshift_variant'] 125873 19225 VLAPLPLHGV True PC9_epitope_Rep3 1014.6226015025001 1014.62150993586 79.169 2 0.1085488628078749 0.0017085592245769674 0.007817096262831424 ['nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 38847 4603 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 24.211 2 0.10854282506161302 0.0017085592245769674 0.007818166335047984 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 88488 22252 QSVDLVFPV True PC9_epitope_Rep1 1002.5385970950199 1002.53807496793 90.409 1 0.10854175086193377 0.0017085592245769674 0.007818356730709868 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 118228 10702 TYLDKVENI True NCI_RA007_Epitope_Rep4 1093.56554011885 1093.56444993586 48.011 2 0.10854090462156826 0.0017085592245769674 0.007818506725057963 ['IFIT1|p.S394Yfs*3|1|0.1|ENSG00000185745|chr10:89403455-89403456|-/ATGG|frameshift_variant', 'ENSG00000185745|ENST00000371804|IFIT1', 'nc|ENSG00000185745|P09914-2|IFIT1'] 35783 15862 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.5172549679301 66.164 1 0.1085408953151918 0.0017085592245769674 0.007818508374609321 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 114757 6321 TQKSLSLSPG True NCI_RA007_Epitope_Rep2 1016.5502244078799 1016.54912993586 29.194 2 0.10853476530472148 0.0017085592245769674 0.007819594989413986 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 1794 11030 AEHGIFLPP True H1975_Epitope_Rep2 979.51271670035 979.51160993586 47.456 2 0.10853203532173974 0.0017085592245769674 0.007820078957192797 ['ENSG00000159079|ENST00000290155|CFAP298'] 104007 16458 SQDFPGSNL True PC9_epitope_Rep1 963.42977492203 963.42866993586 68.131 2 0.10853116144718439 0.0017085592245769674 0.007820233882629958 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 137641 11559 YEIAEGISA True H1975_Epitope_Rep1 951.4549270407099 951.45382993586 49.449 2 0.10851225036887387 0.0017085592245769674 0.007823587271815776 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 7869 13101 ATADYICKV True PC9_epitope_Rep3 982.4793679667399 982.47826993586 55.417 2 0.10851087157274153 0.0017085592245769674 0.007823831819832728 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY'] 139149 14607 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 61.345 2 0.10850948532660827 0.0017085592245769674 0.007824077696646805 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 9866 13331 AYLHTTTTF True PC9_epitope_Rep3 1053.51311062317 1053.51200993586 56.312 2 0.10850596593382698 0.0017085592245769674 0.007824701960633557 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 29888 20956 FVVDLSDQV True PC9_epitope_Rep5 1020.51277627 1020.51166993586 85.667 2 0.10850518553151121 0.0017085592245769674 0.0078248403936002 ['ENSG00000161057|ENST00000292644|PSMC2', 'ENST00000460021.1_1_7:102994369-103002536:+|nuORF'] 17292 15531 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 64.752 2 0.10849168933202498 0.0017085592245769674 0.007827234813499444 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 25756 10838 FETEFNTQP True H1975_Epitope_Rep1 1111.48220441771 1111.48110993586 46.65 2 0.10848849625096724 0.0017085592245769674 0.00782780141546552 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 73525 23109 MVLHIPDIFL True PC9_epitope_Rep1 1196.66275206232 1196.6616499358602 93.691 2 0.10848349382973911 0.0017085592245769674 0.007828689158633693 ['ENST00000462685.1_1_2:74159806-74173970:+|nuORF', 'nc|ENSG00000114956|Q16854-6|DGUOK', 'DGUOK|p.A86Sfs*43|1|0.3|ENSG00000114956|chr2:73939017-73939018|-/A|frameshift_variant'] 48905 6665 KEDLYLKPIQR True NCI_RA007_Epitope_Rep1 1401.79799966517 1401.7963649037902 29.937 3 0.10848202656781454 0.0017085592245769674 0.007828949561327415 ['ENSG00000167658|ENST00000309311|EEF2'] 114618 20422 TQDSSILPL True PC9_epitope_Rep2 972.5127762699999 972.51222496793 83.98 1 0.10848008814763348 0.0017085592245769674 0.007829293595776249 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 104514 20662 SQNDGFFAV True PC9_epitope_Rep3 983.4348603024699 983.43431496793 84.75 1 0.1084797091445802 0.0017085592245769674 0.007829360863654595 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 99593 8135 SIFDGRVVAK True NCI_RA007_Epitope_Rep1 1090.61349337078 1090.6123899358602 35.641 2 0.10847526776841325 0.0017085592245769674 0.007830149188993447 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 107350 11613 SVLGQLGITK True NCI_RA007_Epitope_Rep4 1014.6073453611799 1014.60624993586 51.624 2 0.10847341941485396 0.0017085592245769674 0.007830477286451391 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 93062 6709 RPNDIM[Oxidation]AEV True PC9_epitope_Rep6 1059.50189469691 1059.5007899358602 34.577 2 0.1084630664704895 0.0017085592245769674 0.007832315261787048 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 142911 19226 YYVGGEIVTI True PC9_epitope_Rep6 1112.57537652656 1112.57426993586 86.605 2 0.10846258002081821 0.0017085592245769674 0.007832401632244705 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 288 12814 AAGSPVFL True H1975_Epitope_Rep3 760.41194002992 760.41139496793 54.508 1 0.10844693688105034 0.0017085592245769674 0.007835179604350503 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 75024 14030 NHSDYNMVL True PC9_epitope_Rep5 1091.47059418819 1091.46948993586 58.983 2 0.10844395911203257 0.0017085592245769674 0.007835708516378742 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 41408 17436 HYGLPVVV True PC9_epitope_Rep2 882.49633836022 882.49578496793 72.32 1 0.10843931434304012 0.0017085592245769674 0.007836533590141184 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 100416 18054 SLADLQNDEV True PC9_epitope_Rep1 1102.5142328219802 1102.5131299358602 74.239 2 0.10843763851437326 0.0017085592245769674 0.007836831296633978 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 76821 14319 NRAPQLLIA True PC9_epitope_Rep5 994.5923640033799 994.5912699358599 60.08 2 0.10843729705401976 0.0017085592245769674 0.007836891957493894 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 96873 7385 SATDNVCHL True H1975_Epitope_Rep2 958.4178303393401 958.41672993586 33.346 2 0.10843067370481883 0.0017085592245769674 0.007838068693452674 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 40599 10788 HRIEEVPEL True PC9_epitope_Rep4 1120.58767254576 1120.58656993586 49.254 2 0.10842965010221547 0.0017085592245769674 0.007838250566812342 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 65896 10368 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 44.891 1 0.10842674583129787 0.0017085592245769674 0.007838766618850492 ['ENSG00000182108|ENST00000331808|DEXI'] 43704 7850 IHDSQAPSL True PC9_epitope_Rep3 966.47705946762 966.47596993586 35.182 2 0.10842036764292168 0.0017085592245769674 0.00783990005698547 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 58347 9259 LENEIQTY True NCI_RA007_Epitope_Rep5 1008.4763907612798 1008.47528993586 42.263 2 0.1084199531131879 0.0017085592245769674 0.00783997372660761 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 8200 7565 ATFPDPNVK True NCI_RA007_Epitope_Rep1 987.5025459394699 987.50144993586 33.418 2 0.10841885460822326 0.0017085592245769674 0.007840168954546017 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 85172 5571 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47687496793 26.433 1 0.10841695917326571 0.0017085592245769674 0.007840505825104229 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 127726 12921 VPAPSPLSA True PC9_epitope_Rep2 837.45961849833 837.4590749679301 54.996 1 0.10841437399701193 0.0017085592245769674 0.007840965304052283 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 137019 23722 YALDLSTFL True PC9_epitope_Rep5 1041.53826274185 1041.5371699358602 96.227 2 0.10841311733880772 0.0017085592245769674 0.007841188666873092 ['ENSG00000137331|ENST00000259874|IER3'] 35161 17017 GQWVGTVLL True NCI_RA007_Epitope_Rep4 971.5440168286299 971.54290993586 73.738 2 0.10841065098635656 0.0017085592245769674 0.007841627062833577 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF'] 76944 7566 NRDRTQIAL True PC9_epitope_Rep5 1085.59415490853 1085.59304993586 34.05 2 0.10840866699375457 0.0017085592245769674 0.007841979736147735 ['ENSG00000241685|ENST00000262942|ARPC1A'] 5132 19768 ALLPELREV True PC9_epitope_Rep3 1038.6073453611798 1038.6062499358602 81.266 2 0.10840651311072935 0.0017085592245769674 0.007842362626413418 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 8104 14840 ATDYTFAMY True H1975_Epitope_Rep2 1081.44264810485 1081.4415499358602 62.24 2 0.10840443342293579 0.0017085592245769674 0.007842732344307175 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 6785 21601 AQEDYLFSV True PC9_epitope_Rep1 1070.49204082542 1070.49147496793 87.912 1 0.10840383920073389 0.0017085592245769674 0.007842837985648481 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 11752 7511 DHDENVAL True PC9_epitope_Rep4 911.39847479375 911.39736993586 36.258 2 0.10840251282595756 0.0017085592245769674 0.007843073794667926 ['nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 98146 21465 SESPIVVVL True PC9_epitope_Rep3 941.5433481222899 941.54224993586 87.856 2 0.10839376439180108 0.0017085592245769674 0.007844629303050908 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 132697 13298 VVHDGFEGL True PC9_epitope_Rep2 971.47124581119 971.47014993586 56.428 2 0.10839015870628646 0.0017085592245769674 0.007845270495755398 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 34803 9978 GQHPNIITL True NCI_RA007_Epitope_Rep4 991.5450794577899 991.5439899358599 45.223 2 0.10838848777320706 0.0017085592245769674 0.007845567651995712 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 6139 11319 APM[Oxidation]PPIIHA True PC9_epitope_Rep1 961.50552352537 961.50442993586 48.417 2 0.10838680672174153 0.0017085592245769674 0.007845866618638146 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 139151 13941 YLDTVPEVY True H1975_Epitope_Rep1 1097.52809198097 1097.52757496793 58.779 1 0.10838160956061856 0.0017085592245769674 0.007846790977451305 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 1181 16880 AEAQLWWAA True H1975_Epitope_Rep2 1044.50288029264 1044.5023749679299 70.175 1 0.10838136465560978 0.0017085592245769674 0.00784683453846016 ['ENSG00000159079|ENST00000290155|CFAP298', 'ENST00000483315.1_1_21:33975401-33976611:-|nuORF'] 121709 17013 VFLENVIR True PC9_epitope_Rep4 988.5705659296399 988.56946993586 73.433 2 0.10837549618457594 0.0017085592245769674 0.007847878427345741 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 47601 7488 IVVVTAGVR True NCI_RA007_Epitope_Rep4 912.5756513100798 912.57454993586 35.447 2 0.10837424004188781 0.0017085592245769674 0.00784810188854927 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 42985 7388 IESRTLAIA True NCI_RA007_Epitope_Rep5 972.5603951687599 972.55928993586 35.095 2 0.10837383300225326 0.0017085592245769674 0.007848174300085393 ['ENSG00000147872|ENST00000276914|PLIN2'] 3957 14314 AHDPISPVL True PC9_epitope_Rep5 947.50763131991 947.50652993586 60.062 2 0.10837373755032029 0.0017085592245769674 0.007848191280886534 ['ENSG00000116199|ENST00000263733|FAM20B'] 69873 19307 LVIDAVREI True PC9_epitope_Rep3 1026.6073453611798 1026.6062499358602 79.487 2 0.10836886718625702 0.0017085592245769674 0.007849057760738016 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 4802 8944 ALEAVFGK True NCI_RA007_Epitope_Rep5 833.4647038787699 833.46360993586 41.063 2 0.10836637850535069 0.0017085592245769674 0.007849500554222615 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX', 'ENST00000565907.1_1_X:135961433-135961586:-|nuORF'] 1083 9582 AEAIRILAA True H1975_Epitope_Rep1 926.5549158654999 926.55380993586 41.782 2 0.10836456089020476 0.0017085592245769674 0.007849823964933417 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 65382 10701 LREDSTVSL True PC9_epitope_Rep5 1018.5294889633 1018.52838993586 46.151 2 0.10835943658204848 0.0017085592245769674 0.007850735809231539 ['ENSG00000120875|ENST00000240100|DUSP4'] 49940 17536 KILPTLEAV True PC9_epitope_Rep2 982.60628273202 982.60518993586 72.721 2 0.10835560865513358 0.0017085592245769674 0.007851417035863976 ['ENSG00000143621|ENST00000361891|ILF2'] 25776 12044 FEVEEVETP True H1975_Epitope_Rep2 1077.4866210918099 1077.48552993586 51.407 2 0.10835458112168138 0.0017085592245769674 0.007851599907781597 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'SEPT9|p.S41C|1|0.16|ENSG00000184640|chr17:77402104-77402104|C/G|missense_variant'] 135150 11624 WELGQVHPP True H1975_Epitope_Rep2 1061.52942939365 1061.52832993586 49.78 2 0.108343173925262 0.0017085592245769674 0.007853630342579944 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 73908 16681 NAYTGIVLL True H1975_Epitope_Rep1 962.54368247546 962.5431349679301 69.559 1 0.10834067461398411 0.0017085592245769674 0.007854075277554901 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 118333 12082 TYMKDLYQL True NCI_RA007_Epitope_Rep3 1173.5739966275698 1173.57288993586 54.644 2 0.10833524393229722 0.0017085592245769674 0.007855042147854258 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 66802 10590 LSLTPEQWKS True NCI_RA007_Epitope_Rep3 1187.6186383208699 1187.61754993586 48.706 2 0.10833442304873284 0.0017085592245769674 0.007855188306709386 ['nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5'] 115392 7476 TRLEADEVAA True PC9_epitope_Rep2 1073.53530261973 1073.5342099358602 34.128 2 0.10833297067649991 0.0017085592245769674 0.007855446908965448 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 53137 9853 KPYESYIGA True PC9_epitope_Rep4 1026.5022115862998 1026.50110993586 45.549 2 0.10832941641147084 0.0017085592245769674 0.007856079798576217 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 87827 8374 QRFEGTTSL True PC9_epitope_Rep4 1037.5141732523298 1037.5130699358601 39.668 2 0.10832422688346771 0.0017085592245769674 0.007857003959408469 ['ENSG00000151502|ENST00000281187|VPS26B'] 132474 16304 VVDGFNVLY True H1975_Epitope_Rep2 1024.52294703088 1024.52184993586 67.932 2 0.10832168068059285 0.0017085592245769674 0.007857457430340458 ['nc|ENSG00000179889|Q6P996-3|PDXDC1', 'nc|ENSG00000179889|Q6P996-4|PDXDC1', 'nc|ENSG00000179889|Q6P996-5|PDXDC1', 'ENSG00000179889|ENST00000396410|PDXDC1', 'nc|ENSG00000179889|Q6P996-2|PDXDC1', 'ENST00000570001.5_1_16:15069056-15125764:+|nuORF'] 89734 12308 RADGNFLLY True H1975_Epitope_Rep3 1067.53999407735 1067.5388899358602 52.523 2 0.10832062721390967 0.0017085592245769674 0.00785764505691756 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 103795 12112 SPVYVGRVV True PC9_epitope_Rep1 974.5549158654999 974.55380993586 51.451 2 0.10831257972730826 0.0017085592245769674 0.00785907848876675 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 73489 23020 MVDGTLLLL True PC9_epitope_Rep2 973.5518046310099 973.55070993586 94.039 2 0.1083113306212754 0.0017085592245769674 0.007859301004261555 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 8497 4095 ATSDMDIGK True NCI_RA007_Epitope_Rep3 936.4222470134399 936.42114993586 22.634 2 0.10831018103449112 0.0017085592245769674 0.007859505796791143 ['ENSG00000102158|ENST00000618282|MAGT1'] 138533 15588 YHVNFSQAI True PC9_epitope_Rep2 1077.52434401321 1077.5232499358601 65.236 2 0.10830473133392797 0.0017085592245769674 0.007860476700901306 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF'] 96374 8341 RYVPRASYF True NCI_RA007_Epitope_Rep2 1157.5981776598098 1157.5970899358601 37.084 2 0.10830158843254295 0.0017085592245769674 0.00786103668445699 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 90157 6001 REDFKTAVV True H1975_Epitope_Rep2 1063.56620882519 1063.5651099358602 28.062 2 0.10829940410350906 0.0017085592245769674 0.007861425897947994 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-4|EFCAB11', 'ENST00000555070.1_1_14:89878823-90420935:-|nuORF'] 78322 13257 NYISGIQTI True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52766993586 58.125 2 0.1082869902321802 0.0017085592245769674 0.007863638210165093 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 41188 19374 HVIDSIVGDGI True PC9_epitope_Rep3 1123.5873381925899 1123.58624993586 79.747 2 0.10828383566845454 0.0017085592245769674 0.007864200489911193 ['ENSG00000166801|ENST00000675163|FAM111A'] 73918 14105 NAYTGVVYL True H1975_Epitope_Rep3 998.5072969667399 998.5067449679301 59.583 1 0.10826982772152359 0.0017085592245769674 0.007866697780921438 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 6354 5572 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 26.51 2 0.10826770870086352 0.0017085592245769674 0.007867075619644384 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 9193 19814 AVLTGLVEA True PC9_epitope_Rep5 871.5014833103099 871.5009349679301 81.262 1 0.10826631447871618 0.0017085592245769674 0.007867324230415154 ['ENSG00000100726|ENST00000262319|TELO2'] 2462 16132 AEQLMTLISA True H1975_Epitope_Rep2 1075.55834656343 1075.5577749679298 67.264 1 0.10826270245473059 0.0017085592245769674 0.007867968343867727 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 46442 17421 ISTEVGITNV True PC9_epitope_Rep1 1031.54989005471 1031.54937496793 71.806 1 0.1082593818323206 0.0017085592245769674 0.007868560538096533 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 76147 17749 NMVDIIHSV True PC9_epitope_Rep6 1026.51681610462 1026.51570993586 80.906 2 0.10825647409858408 0.0017085592245769674 0.007869079133780266 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 6334 7607 APRPTIINA True PC9_epitope_Rep6 951.5501648382299 951.54906993586 38.546 2 0.10825646147457495 0.0017085592245769674 0.007869081385350175 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 134705 21796 VYTPTDTLVF True PC9_epitope_Rep1 1154.5859412102598 1154.5848499358601 88.658 2 0.10824842145062236 0.0017085592245769674 0.007870515499529747 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 49067 7195 KEIDVDAVA True H1975_Epitope_Rep2 958.4971262058599 958.49602993586 32.61 2 0.10824366103447135 0.0017085592245769674 0.0078713647427947 ['ENSG00000084774|ENST00000264705|CAD'] 35005 5544 GQTGVIRSV True PC9_epitope_Rep6 915.5137793295099 915.51268993586 29.344 2 0.10824361248593868 0.0017085592245769674 0.007871373404155755 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 108505 18446 SYMGHFDLL True PC9_epitope_Rep6 1081.49026700361 1081.4891699358602 83.596 2 0.10824048422138605 0.0017085592245769674 0.007871931525457324 ['ENSG00000169976|ENST00000367569|SF3B5'] 7014 13469 AQMDYYGTRL True PC9_epitope_Rep4 1216.55465816532 1216.5535699358602 59.705 2 0.10823832348753765 0.0017085592245769674 0.007872317049549684 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000397102.5_1_3:10355120-10362775:-|nuORF', 'ENST00000397099.1_1_3:10357003-10360966:-|nuORF'] 136896 10765 YAEVGRVL True PC9_epitope_Rep4 905.4970666362099 905.49596993586 49.166 2 0.10823789021981182 0.0017085592245769674 0.007872394356565551 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 5215 9017 ALPDQGIAKA True PC9_epitope_Rep3 982.5447451046199 982.54364993586 39.628 2 0.1082240836365131 0.0017085592245769674 0.007874858218845824 ['ENSG00000089289|ENST00000356413|IGBP1'] 121046 11737 VEQNFPAIA True H1975_Epitope_Rep2 987.5025459394698 987.50144993586 50.22 2 0.10822296434385258 0.0017085592245769674 0.007875057995513081 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14520346-14520718:-|nuORF', 'ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF', 'ENST00000474961.5_1_6:31498213-31499248:-|nuORF', 'ENST00000462256.5_1_6:31498213-31500844:-|nuORF'] 104216 10923 SQHGVIIQL True NCI_RA007_Epitope_Rep1 993.5607295219299 993.55962993586 46.481 2 0.10822221248842297 0.0017085592245769674 0.007875192192985518 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 97093 11119 SDGVAVLKV True PC9_epitope_Rep2 886.5123823471799 886.5118349679301 48.094 1 0.10821620771848899 0.0017085592245769674 0.007876264053968 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 35790 15527 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.5172549679301 64.735 1 0.10820882719378083 0.0017085592245769674 0.007877581682247042 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 46984 6835 ITQGTPLKY True H1975_Epitope_Rep2 1019.5651461960299 1019.56404993586 31.207 2 0.10820525025325288 0.0017085592245769674 0.007878220341831506 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 11290 18863 DEHLQLISL True PC9_epitope_Rep6 1066.56587447202 1066.56476993586 85.205 2 0.10820439391023463 0.0017085592245769674 0.007878373248537705 ['ENSG00000163918|ENST00000296273|RFC4'] 61812 20575 LLASEVPQL True PC9_epitope_Rep1 968.5542471591598 968.55314993586 83.956 2 0.10820320094857587 0.0017085592245769674 0.007878586265894551 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2578584-2579570:-|nuORF', 'ENST00000469750.5_1_7:2577705-2579570:-|nuORF'] 1539 10378 AEEPVFAAA True H1975_Epitope_Rep2 903.4337976733099 903.43324496793 44.93 1 0.1082020332968976 0.0017085592245769674 0.007878794769239212 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 31284 20706 GDIEQFLITG True PC9_epitope_Rep1 1091.54989005471 1091.54937496793 84.472 1 0.1081994312340257 0.0017085592245769674 0.007879259429369073 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 9591 20010 AYAENIALL True PC9_epitope_Rep4 976.5229470308799 976.52184993586 85.102 2 0.10819597459721064 0.0017085592245769674 0.00787987673487716 ['ENSG00000196455|ENST00000356763|PIK3R4'] 47574 14455 IVVGRITEV True PC9_epitope_Rep1 984.5967806774798 984.59568993586 60.425 2 0.10819471985534916 0.0017085592245769674 0.007880100825232968 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 26351 9891 FHSGDDSQVL True PC9_epitope_Rep1 1103.48835242731 1103.48724993586 42.904 2 0.10819088080089169 0.0017085592245769674 0.007880786498544394 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 95622 15277 RYALQLQQI True PC9_epitope_Rep6 1131.64004247179 1131.6389499358602 70.879 2 0.10818769918905054 0.0017085592245769674 0.00788135479312342 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1'] 53667 15601 KSDPFLVFY True H1975_Epitope_Rep2 1114.5698972233 1114.5688099358601 65.165 2 0.10816801430900448 0.0017085592245769674 0.007884871755336875 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant', 'CPNE8|p.K277Efs*5|1|0.39|ENSG00000139117|chr12:38724870-38724871|-/T|frameshift_variant', 'ENST00000551855.1_1_12:39120300-39161507:-|nuORF', 'ENSG00000124772|ENST00000244751|CPNE5', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 68631 22912 LTIEDGIFEV True PC9_epitope_Rep1 1134.58085582982 1134.5802749679299 92.929 1 0.1081632819743414 0.0017085592245769674 0.007885717474841734 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 107205 13445 SVIPQIQKV True PC9_epitope_Rep4 1010.6124307416198 1010.61132993586 59.613 2 0.10814601148244045 0.0017085592245769674 0.007888804641733301 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 90659 8441 REQDLPLAEA True H1975_Epitope_Rep2 1140.5775017848798 1140.57640993586 37.419 2 0.10813702150063738 0.0017085592245769674 0.007890412097131792 ['ENSG00000169895|ENST00000380155|SYAP1'] 41214 21163 HVLDTLIQL True PC9_epitope_Rep5 1050.60734536118 1050.6062499358602 86.457 2 0.10813618902975072 0.0017085592245769674 0.007890560963235593 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 114716 14202 TQIHSMVNL True PC9_epitope_Rep1 1041.52771514149 1041.52660993586 59.451 2 0.10813478370180843 0.0017085592245769674 0.007890812276306515 ['ENST00000371873.9_1_1:47834144-47834267:+|nuORF'] 136444 15730 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.53367496793 65.678 1 0.10813277663857435 0.0017085592245769674 0.007891171210354878 ['ENSG00000116221|ENST00000360840|MRPL37'] 98935 15814 SHAENILQI True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 65.818 2 0.10812325299923851 0.0017085592245769674 0.007892874589415759 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 49616 7440 KGDVDISLPK True NCI_RA007_Epitope_Rep2 1070.5971746003 1070.5960699358602 33.566 2 0.10812182387414458 0.0017085592245769674 0.00789313023048471 ['ENSG00000124942|ENST00000378024|AHNAK'] 7218 10721 ARDDQIHIL True PC9_epitope_Rep2 1079.57235683479 1079.5712499358601 46.554 2 0.10812180936207819 0.0017085592245769674 0.007893132826435717 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 131175 12167 VTEKDLLLY True H1975_Epitope_Rep3 1092.60667665484 1092.60617496793 51.972 1 0.10811834854498964 0.0017085592245769674 0.007893751928692613 ['ENSG00000168807|ENST00000336278|SNTB2'] 74848 18837 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 77.241 2 0.10811636726259755 0.0017085592245769674 0.007894106379496462 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 6431 21166 APRTVLLLLSA True PC9_epitope_Rep5 1152.7230438197598 1152.72194993586 86.464 2 0.10811306640153481 0.0017085592245769674 0.007894696936624467 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 39238 16505 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 71.457 2 0.10811112105036544 0.0017085592245769674 0.00789504499941355 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 134717 21646 VYTPVDSLVF True PC9_epitope_Rep4 1138.5910265906998 1138.58992993586 91.452 2 0.10811107474164121 0.0017085592245769674 0.007895053285164221 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 27160 17570 FLLDPVKGERL True PC9_epitope_Rep2 1285.73942215989 1285.73776490379 72.859 3 0.1080960324284398 0.0017085592245769674 0.007897745162889628 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 22289 6443 ETDEQRLRDEY True H1975_Epitope_Rep3 1452.6481005258397 1452.64645490379 29.759 3 0.10809523740641724 0.0017085592245769674 0.007897887459668637 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 77601 6897 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 31.449 2 0.10809388120174628 0.0017085592245769674 0.007898130205266245 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 77018 8805 NRIANQVAI True PC9_epitope_Rep4 997.5668775315298 997.56578993586 41.391 2 0.10809002581150087 0.0017085592245769674 0.007898820316695723 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 102025 21033 SLQSTILGV True PC9_epitope_Rep3 916.5229470308799 916.52184993586 86.181 2 0.1080795923922387 0.0017085592245769674 0.00790068818129732 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant', 'LONP2|p.D481Lfs*6|1|0.35|ENSG00000102910|chr16:48296067-48296073|CCTTTGA/-|frameshift_variant'] 68197 14285 LTDTFTAYY True H1975_Epitope_Rep2 1093.49679185269 1093.49627496793 60.096 1 0.10807478586967846 0.0017085592245769674 0.00790154882240869 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 47685 17790 IYADLNQNDF True PC9_epitope_Rep6 1211.5458673034302 1211.5447699358601 81.064 2 0.10807253413295057 0.0017085592245769674 0.007901952042563467 ['ENSG00000064763|ENST00000536681|FAR2', 'FAR2|p.A81D|1|0.21|ENSG00000064763|chr12:29293352-29293352|C/A|missense_variant'] 8781 16864 AVDLTLPKV True PC9_epitope_Rep6 954.57498260374 954.57388993586 77.386 2 0.10805605242932834 0.0017085592245769674 0.0079049040380019 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 76513 14123 NQIKEFIYA True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 66.194 2 0.10805015714904806 0.0017085592245769674 0.007905960184824843 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 2656 7796 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.4597949679301 34.934 1 0.10804146512531915 0.0017085592245769674 0.007907517620114518 ['ENSG00000038219|ENST00000040738|BOD1L1'] 49015 11459 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 51.007 2 0.10803854982504846 0.0017085592245769674 0.007908040049404068 ['ENSG00000197747|ENST00000368811|S100A10'] 79263 8680 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 38.752 2 0.10803836886074283 0.0017085592245769674 0.007908072479769874 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 87504 12376 QQGPVGVNV True PC9_epitope_Rep5 896.4715801643599 896.47048993586 52.601 2 0.10803671435052657 0.0017085592245769674 0.007908368988234203 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.T950P|1|0.48|ENSG00000196924|chrX:154361766-154361766|T/G|missense_variant'] 21288 13843 ERDYTYEEL True PC9_epitope_Rep3 1216.5247975056798 1216.52370993586 58.329 2 0.10803406662725633 0.0017085592245769674 0.007908843514944955 ['ENSG00000125977|ENST00000374980|EIF2S2'] 142575 19142 YYLNLIEL True NCI_RA007_Epitope_Rep3 1039.5589981864298 1039.5579099358602 83.598 2 0.10803039689126488 0.0017085592245769674 0.007909501252879769 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 4132 9183 AHSPLAAQL True PC9_epitope_Rep6 906.4923156089401 906.49120993586 45.452 2 0.1080301291680044 0.0017085592245769674 0.007909549239799214 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 108764 20555 SYSMIVNNL True PC9_epitope_Rep5 1039.50083168731 1039.4997299358602 84.109 2 0.10802629506347303 0.0017085592245769674 0.007910236498412791 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 137454 13677 YEDSGIPLP True H1975_Epitope_Rep1 989.4705771048499 989.47002496793 57.744 1 0.10802620599074662 0.0017085592245769674 0.007910252465276442 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 69538 22588 LVDDNYFYL True PC9_epitope_Rep1 1160.5389910178399 1160.5378899358602 91.692 2 0.1080245832601232 0.0017085592245769674 0.007910543355704867 ['ENSG00000174231|ENST00000304992|PRPF8'] 15059 13007 DYQALRTSI True PC9_epitope_Rep6 1065.54547338061 1065.54436993586 61.613 2 0.1080200117084251 0.0017085592245769674 0.00791136290682312 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 140114 13649 YQNQGIYQV True PC9_epitope_Rep4 1111.52982331647 1111.5287299358602 60.393 2 0.10801615985852858 0.0017085592245769674 0.007912053499173052 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 88148 19989 QRTFVLEVM True PC9_epitope_Rep1 1121.5903153980498 1121.58920993586 81.712 2 0.10800830410402741 0.0017085592245769674 0.007913462125828486 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP', 'ENST00000466134.5_1_21:45719988-45734072:+|nuORF', 'nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF'] 105114 12521 SREPSQVIF True PC9_epitope_Rep2 1061.5505587610498 1061.54946993586 53.469 2 0.10800482389478121 0.0017085592245769674 0.007914086244507816 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 134597 21490 VYSIVPQSW True PC9_epitope_Rep3 1077.54949613189 1077.54897496793 87.953 1 0.10800149483072939 0.0017085592245769674 0.007914683302212384 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 86562 10868 QLDTHMELY True H1975_Epitope_Rep2 1148.51721002744 1148.5161099358602 46.833 2 0.10799299896373926 0.0017085592245769674 0.007916207207608944 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 9675 23135 AYFDVPELI True PC9_epitope_Rep3 1065.5382627418498 1065.5371699358602 94.256 2 0.10799089585084015 0.0017085592245769674 0.007916584487114013 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 62740 17120 LLLPGELAK True PC9_epitope_Rep1 952.5957180483199 952.59462993586 70.676 2 0.1079750136659049 0.0017085592245769674 0.007919434168277808 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 2515 6293 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.4972449679301 29.143 1 0.10796835663068405 0.0017085592245769674 0.0079206289096162 ['ENSG00000146733|ENST00000275605|PSPH'] 91685 4264 RKAALEQDL True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 23.468 2 0.10796792099628216 0.0017085592245769674 0.007920707099196003 ['ENSG00000100292|ENST00000216117|HMOX1'] 24386 14237 FAAGETFL True H1975_Epitope_Rep3 854.41741933318 854.4168749679301 60.104 1 0.10796273395511606 0.0017085592245769674 0.007921638149403326 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 9952 20881 AYNDNWFITF True NCI_RA007_Epitope_Rep5 1289.57168812845 1289.5705899358602 87.315 2 0.10795492979959674 0.0017085592245769674 0.007923039158650036 ['ENSG00000107929|ENST00000316157|LARP4B'] 106553 5036 STMGYMAAK True NCI_RA007_Epitope_Rep3 958.4252242188999 958.42412993586 26.803 2 0.10795419919694893 0.0017085592245769674 0.00792317032935379 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 32161 8849 GEVLDPTAA True H1975_Epitope_Rep2 871.4287122928699 871.42816496793 39.004 1 0.10795251194005893 0.0017085592245769674 0.007923473263547049 ['ENSG00000140688|ENST00000327237|RUSF1', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 223 21768 AAFPGASLYL True PC9_epitope_Rep2 1008.5280324113198 1008.52692993586 89.201 2 0.10794930038708264 0.0017085592245769674 0.007924049904436346 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 126310 23038 VLIETLVTL True PC9_epitope_Rep5 999.6215984429899 999.62050993586 93.607 2 0.10794266033995517 0.0017085592245769674 0.007925242266853507 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY', 'ENST00000606061.1_1_20:32881868-32891076:-|nuORF'] 52719 15622 KMIEDLQNEL True PC9_epitope_Rep6 1231.61183868827 1231.6107499358602 72.295 2 0.10793317778518999 0.0017085592245769674 0.007926945362430934 ['ENSG00000198887|ENST00000361138|SMC5'] 98999 14680 SHDLPSVL True PC9_epitope_Rep1 866.44978209062 866.44868993586 61.289 2 0.10792693867420129 0.0017085592245769674 0.007928066118275451 ['ENSG00000103148|ENST00000611875|NPRL3'] 127732 13154 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.4590749679301 55.601 1 0.10792447753648576 0.0017085592245769674 0.00792850826409278 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 95189 10062 RVIEGDVVSA True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 43.683 2 0.10792361716144969 0.0017085592245769674 0.007928662836928646 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 25584 10462 FELFADKVPK True H1975_Epitope_Rep3 1192.6492101731599 1192.64755490379 45.304 3 0.10792340196122274 0.0017085592245769674 0.007928701499719951 ['ENSG00000196262|ENST00000468812|PPIA'] 45520 17963 IQPDNIVYV True PC9_epitope_Rep6 1059.56006081559 1059.5589699358602 81.723 2 0.10792323618997955 0.0017085592245769674 0.007928731282242784 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 21674 5653 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 26.567 2 0.10791814481267356 0.0017085592245769674 0.007929646053540882 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 92366 18100 RLPETLPSL True PC9_epitope_Rep2 1024.59169529704 1024.5905899358602 74.924 2 0.10791468475467686 0.0017085592245769674 0.007930267782680986 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 87708 18244 QRADDILDL True PC9_epitope_Rep2 1057.54038800017 1057.53928993586 75.495 2 0.10790097967933689 0.0017085592245769674 0.007932730875413475 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4', 'ENST00000562200.5_1_16:70543798-70557434:-|nuORF'] 96213 15405 RYPTSIASL True PC9_epitope_Rep3 1006.5447451046199 1006.54364993586 64.41 2 0.1078935147965363 0.0017085592245769674 0.007934072783680385 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 99391 15712 SHVDLVVM[Oxidation]V True PC9_epitope_Rep2 1013.52156751233 1013.52046993586 65.71 2 0.107889612474503 0.0017085592245769674 0.007934774363201004 ['ENSG00000031698|ENST00000234677|SARS1'] 120621 11088 VEIAYSDVA True H1975_Epitope_Rep2 965.4705771048499 965.46948993586 47.684 2 0.1078889099170641 0.0017085592245769674 0.00793490067894781 ['ENSG00000169504|ENST00000374379|CLIC4'] 118295 21476 TYLPTSPLL True PC9_epitope_Rep3 1003.55899818643 1003.55847496793 87.899 1 0.10788822059010719 0.0017085592245769674 0.00793502461781644 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 85351 9197 QETLTNISA True H1975_Epitope_Rep3 975.48728979815 975.48618993586 40.368 2 0.10788686312181453 0.0017085592245769674 0.00793526869190477 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'DAPK3|p.T265Sfs*12|1|0.12|ENSG00000167657|chr19:3960093-3960094|-/C|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 80090 20039 PFLPKPLFF True PC9_epitope_Rep6 1104.6371889374798 1104.6360899358601 89.747 2 0.10788502270712368 0.0017085592245769674 0.00793559961178142 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 47397 15118 IVKDVLLVA True PC9_epitope_Rep6 968.6270181765999 968.62592993586 70.212 2 0.1078825800388338 0.0017085592245769674 0.007936038841775508 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 62738 11197 LLLPGELAK True NCI_RA007_Epitope_Rep5 952.5957180483199 952.59462993586 49.703 2 0.10788154284503135 0.0017085592245769674 0.007936225352550813 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 91680 16434 RIYGKFLGL True PC9_epitope_Rep2 1065.6335005393698 1065.63240993586 68.455 2 0.10788042663360156 0.0017085592245769674 0.007936426077197491 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'PPP2R5E|p.R214I|1|0.25|ENSG00000154001|chr14:63396625-63396625|C/A|missense_variant', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 95562 20128 RWSPVRPLVF True PC9_epitope_Rep3 1255.71896149883 1255.7173049037901 82.676 3 0.10786714773552862 0.0017085592245769674 0.00793881435372628 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 137773 13730 YEPPVQESV True PC9_epitope_Rep3 1046.49204082542 1046.49094993586 57.895 2 0.10786451115467535 0.0017085592245769674 0.007939288638537904 ['ENSG00000145425|ENST00000274065|RPS3A'] 2137 6544 AELPASVHA True H1975_Epitope_Rep3 893.4606811274899 893.45958993586 30.139 2 0.10785706822971527 0.0017085592245769674 0.007940627666392223 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 77072 17881 NRLEEPGNFVL True PC9_epitope_Rep4 1286.6619001151798 1286.66080993586 76.819 2 0.10785550833950397 0.0017085592245769674 0.007940908327825676 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 96064 15011 RYLSKVLEL True PC9_epitope_Rep4 1119.6651945904698 1119.6640899358601 65.678 2 0.10785167487288112 0.0017085592245769674 0.00794159810051403 ['nc|nan|Q8WUR7-2|C15orf40', 'ENSG00000169609|ENST00000304177|C15orf40', 'nc|nan|Q8WUR7-3|C15orf40', 'ENST00000565725.1_1_15:83677164-83680359:-|nuORF'] 6345 6660 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 30.422 2 0.1078496208112021 0.0017085592245769674 0.007941967720746509 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 97285 9769 SEAFSVASAA True H1975_Epitope_Rep2 938.4345259492999 938.43397496793 42.563 1 0.107840463137813 0.0017085592245769674 0.00794361580961769 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 39486 16284 HLDLGILYY True H1975_Epitope_Rep3 1105.58079626017 1105.5796899358602 68.106 2 0.1078351765137805 0.0017085592245769674 0.007944567383396266 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 115321 15928 TRIDLIQKL True PC9_epitope_Rep5 1098.67609362734 1098.6749899358601 66.259 2 0.1078210673486222 0.0017085592245769674 0.007947107522062615 ['ENSG00000170677|ENST00000397942|SOCS6'] 54815 8212 KYPDRVPVI True NCI_RA007_Epitope_Rep5 1085.62332977849 1085.62222993586 38.268 2 0.10781145182132439 0.0017085592245769674 0.007948839099128215 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 34998 6225 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 29.342 2 0.10781106493047811 0.0017085592245769674 0.007948908778568096 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 22882 9578 EVDPDTILK True H1975_Epitope_Rep2 1028.5389910178399 1028.5378899358602 41.816 2 0.10781094804015114 0.0017085592245769674 0.00794892983075228 ['ENSG00000100227|ENST00000252115|POLDIP3', 'nc|ENSG00000100227|Q9BY77-2|POLDIP3'] 14956 11974 DYFEEYGK True PC9_epitope_Rep6 1049.4341915961297 1049.4330899358602 57.324 2 0.10781034780065529 0.0017085592245769674 0.007949037935946186 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 26437 18629 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.4596499358602 76.444 2 0.10781024831886685 0.0017085592245769674 0.007949055853094843 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 58815 6330 LESPHSLPA True H1975_Epitope_Rep2 949.48689587533 949.48578993586 29.281 2 0.10780877040138817 0.0017085592245769674 0.007949322037731205 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 100973 18208 SLFPGKLEVV True PC9_epitope_Rep6 1087.62774645259 1087.62664993586 82.678 2 0.10780822909164643 0.0017085592245769674 0.007949419534052024 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 6329 9593 APRPTIINA True PC9_epitope_Rep3 951.5501648382299 951.54906993586 41.852 2 0.10780556981200952 0.0017085592245769674 0.007949898518688919 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 21645 15469 ERSDIVVQI True PC9_epitope_Rep3 1057.5767735088898 1057.57566993586 64.654 2 0.10779495016367495 0.0017085592245769674 0.007951811588156539 ['ENSG00000041802|ENST00000265245|LSG1', 'LSG1|p.V181E|1|0.3|ENSG00000041802|chr3:194660113-194660113|A/T|missense_variant'] 26214 14965 FHDMGGVQL True PC9_epitope_Rep2 1002.4593012284997 1002.4582099358599 62.821 2 0.10779195634102763 0.0017085592245769674 0.00795235098858722 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 104061 16612 SQDPTMIGV True PC9_epitope_Rep1 946.44298245802 946.44188993586 68.724 2 0.10778740385682768 0.0017085592245769674 0.007953171282491886 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 8455 5229 ATPTSPIRVK True NCI_RA007_Epitope_Rep2 1068.6291434349198 1068.6280499358602 24.96 2 0.10778497531725051 0.0017085592245769674 0.007953608904703912 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 77107 18140 NRMADAIIL True PC9_epitope_Rep3 1015.5484505860699 1015.54734993586 74.976 2 0.10778400025106416 0.0017085592245769674 0.007953784617917792 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A'] 53046 9639 KPNEGAIVEV True PC9_epitope_Rep2 1054.56587447202 1054.56476993586 42.418 2 0.10778350223223829 0.0017085592245769674 0.007953874365566216 ['ENSG00000004478|ENST00000001008|FKBP4'] 120 19909 AAAWPLLL True H1975_Epitope_Rep1 853.5061747679299 853.5056249679301 82.859 1 0.1077826077848979 0.0017085592245769674 0.007954035555792147 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 26432 12572 FIDASRLVY True H1975_Epitope_Rep1 1082.5760452329 1082.57494993586 53.405 2 0.1077746206690606 0.0017085592245769674 0.007955475070362615 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 105330 17229 SRPPLLGF True PC9_epitope_Rep4 885.50723739709 885.50614993586 74.279 2 0.10776743156316454 0.0017085592245769674 0.007956770974847349 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 120321 6240 VEEADAAMA True H1975_Epitope_Rep3 905.3800478482899 905.3794949679301 29.014 1 0.10776604684927726 0.0017085592245769674 0.007957020606040421 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 77200 10514 NRSNTVVIM True PC9_epitope_Rep3 1032.53861417836 1032.53750993586 45.381 2 0.10775188856106514 0.0017085592245769674 0.007959573444442621 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 117981 10285 TYDKGYQF True PC9_epitope_Rep2 1020.45526139388 1020.45416993586 44.892 2 0.1077496364520457 0.0017085592245769674 0.007959979588280987 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 141957 19175 YVIEDDVNM True PC9_epitope_Rep3 1096.47467650912 1096.47356993586 78.975 2 0.10774927309030542 0.0017085592245769674 0.007960045118567833 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 8494 4227 ATSAPLVSR True NCI_RA007_Epitope_Rep3 900.50288029264 900.50178993586 23.295 2 0.10774574526141287 0.0017085592245769674 0.007960681370116771 ['ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'ENST00000497509.1_1_22:46926386-46930076:-|nuORF', 'ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 8855 19005 AVFDKTLAEL True PC9_epitope_Rep4 1105.60192562757 1105.60082993586 81.194 2 0.10774380844956677 0.0017085592245769674 0.007961030699170755 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 77749 11425 NTPEYMEKI True PC9_epitope_Rep4 1123.52196105471 1123.5208699358602 51.714 2 0.10774283108457114 0.0017085592245769674 0.00796120698519624 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 78428 12879 NYLSIFRKF True NCI_RA007_Epitope_Rep3 1186.6498788795 1186.6482449037899 57.916 3 0.10773914660529539 0.0017085592245769674 0.007961871583684136 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 3280 5282 AGFAGDDAPR True PC9_epitope_Rep4 975.4410083120698 975.43990993586 27.022 2 0.10773539952770768 0.0017085592245769674 0.007962547528413978 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 87196 21921 QPILLELEA True PC9_epitope_Rep5 1024.580461907 1024.57987496793 89.361 1 0.10773456919333547 0.0017085592245769674 0.007962697322007885 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 18788 11348 ELDENLEY True H1975_Epitope_Rep2 1023.43967089939 1023.43907496793 48.699 1 0.10772647270177686 0.0017085592245769674 0.007964158083992803 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 112709 19910 TLGPVPEI True PC9_epitope_Rep2 824.4643695256 824.46382496793 81.979 1 0.10772095326536886 0.0017085592245769674 0.007965154044100786 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 73018 18726 MRASSFLIV True PC9_epitope_Rep4 1022.5582869937799 1022.55718993586 80.111 2 0.10771470662260338 0.0017085592245769674 0.007966281370608936 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 26363 10207 FHTDPEAL True PC9_epitope_Rep2 928.42904664604 928.4279499358599 44.598 2 0.107709445599642 0.0017085592245769674 0.007967230942518421 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 7910 3824 ATALPTGTSK True NCI_RA007_Epitope_Rep3 945.5131106231701 945.51200993586 21.25 2 0.10770520221390023 0.0017085592245769674 0.007967996918724712 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 131049 10975 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.4816749679298 47.244 1 0.1077046483452778 0.0017085592245769674 0.00796809690313624 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 97572 7658 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 34.41 1 0.10770177883566127 0.0017085592245769674 0.007968614926637975 ['nc|ENSG00000128951|P33316-2|DUT'] 141811 16187 YVDDGLISL True H1975_Epitope_Rep3 993.5018772331299 993.50132496793 67.718 1 0.1077012885223107 0.0017085592245769674 0.007968703444607213 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 115769 13064 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 55.338 1 0.10769946169240911 0.0017085592245769674 0.007969033256894258 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 68077 12993 LTDLVPNTEY True H1975_Epitope_Rep2 1163.57101942211 1163.5704749679298 55.096 1 0.10769473227655717 0.0017085592245769674 0.007969887157527828 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 55475 11861 LAGDGVGAVNI True H1975_Epitope_Rep1 984.52400966004 984.5234649679301 50.621 1 0.10769330938463915 0.0017085592245769674 0.007970144079319435 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 36034 5666 GTYVSSVPR True NCI_RA007_Epitope_Rep4 964.4977949121999 964.49668993586 28.4 2 0.10769015687593692 0.0017085592245769674 0.007970713334558432 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 47121 16182 ITVEKIIKI True PC9_epitope_Rep5 1055.69543208959 1055.6943299358602 67.233 2 0.10768961138777661 0.0017085592245769674 0.0079708118385025 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 141929 13189 YVFPGVTRL True H1975_Epitope_Rep2 1050.58621599378 1050.5851099358601 55.857 2 0.1076893612287819 0.0017085592245769674 0.007970857012465296 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 1532 10891 AEEPGTFAV True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 46.92 1 0.107679660863393 0.0017085592245769674 0.007972608904674635 ['ENSG00000188419|ENST00000357749|CHM', 'CHM|p.R488W|1|0.55|ENSG00000188419|chrX:85894236-85894236|G/A|missense_variant'] 660 8766 AATGGGIVRV True PC9_epitope_Rep5 899.51886470995 899.51776993586 38.66 2 0.107679344579005 0.0017085592245769674 0.007972666032090108 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 131159 13529 VTEIMSMGY True H1975_Epitope_Rep2 1029.45110461357 1029.45057496793 57.176 1 0.10767831424668355 0.0017085592245769674 0.007972852133873559 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 38286 4307 HEEVSQPVSA True H1975_Epitope_Rep2 1081.50400249145 1081.50290993586 21.678 2 0.10767384948684727 0.0017085592245769674 0.007973658620909692 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000529348.1_1_11:130109693-130131768:-|nuORF', 'nc|ENSG00000196323|Q8NCP5-3|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-4|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-2|ZBTB44'] 134785 21902 VYTVVDEMF True PC9_epitope_Rep2 1101.5052483614097 1101.5041499358601 89.722 2 0.10767346251864869 0.0017085592245769674 0.007973728524194984 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 23019 15103 EVFSSFAHA True PC9_epitope_Rep1 993.4555957470499 993.45448993586 62.912 2 0.10767045186355748 0.0017085592245769674 0.007974272399623937 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 87910 12261 QRISETTML True PC9_epitope_Rep3 1077.54884450889 1077.54774993586 52.19 2 0.10766577644803003 0.0017085592245769674 0.00797511708528642 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 88165 18576 QRVEDAFYTL True PC9_epitope_Rep2 1240.6088019131596 1240.6077099358602 76.805 2 0.10766348637762058 0.0017085592245769674 0.007975530853187585 ['nc|ENSG00000133703|P01116|KRAS'] 116250 17285 TTDFIYQLY True H1975_Epitope_Rep1 1162.55464108198 1162.55354993586 71.948 2 0.10766303407163869 0.0017085592245769674 0.00797561257788216 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 122399 14802 VGDPSVHLL True PC9_epitope_Rep2 935.5076313199099 935.50652993586 62.201 2 0.10765949000953086 0.0017085592245769674 0.007976252963047497 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 62064 18180 LLDTPAQLWY True H1975_Epitope_Rep3 1218.62847472858 1218.62736993586 76.185 2 0.1076494963607922 0.0017085592245769674 0.007978059006770954 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4', 'nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF'] 84852 10742 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 46.346 2 0.10764707950094644 0.0017085592245769674 0.007978495838862202 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 55236 11938 LADELINAA True H1975_Epitope_Rep2 928.48656152216 928.48601496793 50.997 1 0.10763893833011746 0.0017085592245769674 0.007979967473622113 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000599232.1_1_19:58905872-58905992:+|nuORF'] 93445 5208 RQGSPTPAL True NCI_RA007_Epitope_Rep4 925.4981292653699 925.49702993586 26.568 2 0.10763871079906356 0.0017085592245769674 0.007980008606922582 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant'] 132182 11367 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 50.637 2 0.10763042082873975 0.0017085592245769674 0.007981507415853725 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 109647 4153 TEAPLNPKA True H1975_Epitope_Rep3 939.5025459394699 939.50144993586 21.094 2 0.10763015821708241 0.0017085592245769674 0.007981554899917429 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 115345 20668 TRIGVMSLI True PC9_epitope_Rep1 988.5739370579199 988.57282993586 84.323 2 0.10762995816569018 0.0017085592245769674 0.007981591072344677 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 29372 7316 FVDKPVAY True H1975_Epitope_Rep2 937.4909186266098 937.48982993586 33.081 2 0.10762639476584575 0.0017085592245769674 0.007982235417382402 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B', 'nc|ENSG00000115750|Q53T94-3|TAF1B'] 31880 10537 GELLFVHSA True NCI_RA007_Epitope_Rep3 971.50763131991 971.50652993586 48.504 2 0.10762567283297966 0.0017085592245769674 0.00798236596563977 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 21428 15944 ERIQDYDVSL True PC9_epitope_Rep4 1236.5986311522797 1236.5975299358602 69.256 2 0.1076245143699071 0.0017085592245769674 0.007982575456645904 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 98354 5757 SEYLQQHVA True NCI_RA007_Epitope_Rep3 1073.51417325233 1073.5130699358601 29.626 2 0.10761480546856476 0.0017085592245769674 0.00798433137711699 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 6484 7191 APSPATAAATA True PC9_epitope_Rep1 927.4661604307499 927.46506993586 32.473 2 0.10761414558281485 0.0017085592245769674 0.007984450735438377 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 17774 17636 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.5176449679301 73.118 1 0.10760998200681192 0.0017085592245769674 0.007985203871314848 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 27473 15495 FMDPASALY True H1975_Epitope_Rep3 1013.45281886573 1013.4522749679301 65.018 1 0.10760418262914982 0.0017085592245769674 0.007986253016287427 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 45429 8420 IQHPSNVL True PC9_epitope_Rep5 906.49231560894 906.49120993586 37.328 2 0.10760341466980507 0.0017085592245769674 0.00798639195507427 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 27471 15626 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.45172993586 65.259 2 0.10760161658987759 0.0017085592245769674 0.007986717271836611 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 57687 5877 LEEGSVEA True H1975_Epitope_Rep3 832.3814277472799 832.38087496793 27.617 1 0.10760101289525131 0.0017085592245769674 0.007986826497868048 ['ENSG00000007080|ENST00000445755|CCDC124'] 88767 12459 QTPQRLLEV True PC9_epitope_Rep4 1082.6084079903399 1082.60730993586 55.731 2 0.10759583458168212 0.0017085592245769674 0.007987763465577927 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 138409 14129 YHHGYSYIL True PC9_epitope_Rep1 1151.53999407735 1151.5383449037902 59.172 3 0.10759481459146183 0.0017085592245769674 0.007987948035826057 ['ENSG00000134531|ENST00000256951|EMP1'] 9964 10574 AYNPVTHQL True PC9_epitope_Rep1 1041.52434401321 1041.5232499358601 45.563 2 0.1075850702111643 0.0017085592245769674 0.007989711517651049 ['ENST00000525625.1_1_11:125884983-125893371:-|nuORF', 'ENSG00000064309|ENST00000531738|CDON', 'nc|ENSG00000064309|Q4KMG0|CDON'] 17907 8612 EIAEAYLGK True NCI_RA007_Epitope_Rep1 992.5178616504398 992.51676993586 37.499 2 0.10757186769688229 0.0017085592245769674 0.007992101431714051 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 14617 16934 DVANKIGII True PC9_epitope_Rep1 941.5545815123298 941.55348993586 69.96 2 0.10757162611260264 0.0017085592245769674 0.007992145169630895 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 65359 11084 LRDQGGVVL True PC9_epitope_Rep3 955.5450794577898 955.5439899358599 47.632 2 0.1075690287167384 0.0017085592245769674 0.007992615432878204 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 135133 9099 WEIDNNPKV True H1975_Epitope_Rep1 1113.54547338061 1113.54436993586 39.903 2 0.10756855043232742 0.0017085592245769674 0.00799270203005074 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000463712.6_1_9:15489396-15510916:-|nuORF'] 134370 6922 VYPERSTSY True PC9_epitope_Rep5 1100.51383889916 1100.51274993586 31.596 2 0.10756442285131874 0.0017085592245769674 0.007993449398818157 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 115024 8107 TRATEGMVVA True PC9_epitope_Rep3 1033.5226297610498 1033.5215299358601 36.16 2 0.10756305056255158 0.0017085592245769674 0.007993697889977088 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 117295 14789 TVMDSKIVQV True PC9_epitope_Rep5 1118.60054572858 1118.59944993586 61.886 2 0.10756193043848376 0.0017085592245769674 0.007993900725206343 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 68417 10879 LTETVVTEY True H1975_Epitope_Rep3 1053.52300660053 1053.5224749679298 46.928 1 0.10755385975543101 0.0017085592245769674 0.007995362334031114 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 88854 10490 QVDEDALTY True H1975_Epitope_Rep2 1052.4662200004 1052.46567496793 45.368 1 0.10754639836210282 0.0017085592245769674 0.007996713829173503 ['ENSG00000114480|ENST00000429644|GBE1'] 111227 6255 THITAQTAV True PC9_epitope_Rep3 940.4977949122 940.49668993586 29.097 2 0.10753975433870012 0.0017085592245769674 0.007997917458134603 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 86064 22621 QHSEIFWLL True PC9_epitope_Rep1 1171.60259433391 1171.6014899358602 91.821 2 0.10753851959190465 0.0017085592245769674 0.007998141163686271 ['ENST00000565925.5_1_16:81015450-81030931:-|nuORF', 'ENST00000569187.5_1_16:81015453-81040468:-|nuORF'] 76088 21162 NMLPQIFRV True PC9_epitope_Rep1 1116.6113851958 1116.61028993586 86.233 2 0.10753812156431196 0.0017085592245769674 0.007998213277718656 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 52671 20239 KLVGEFLEV True PC9_epitope_Rep1 1032.5855472874398 1032.5844499358602 82.676 2 0.10753094751433571 0.0017085592245769674 0.007999513168676272 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 33898 9262 GLQFPVGR True H1975_Epitope_Rep1 872.4868363056798 872.48572993586 40.538 2 0.1075269220502374 0.0017085592245769674 0.008000242645696262 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 23859 20243 EYIQFVPLL True NCI_RA007_Epitope_Rep4 1120.6168474157198 1120.61574993586 87.603 2 0.10752096677524689 0.0017085592245769674 0.008001321952285258 ['ENSG00000179409|ENST00000319004|GEMIN4'] 31988 5570 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 26.429 2 0.10751853369983318 0.0017085592245769674 0.008001762952066015 ['ENSG00000108344|ENST00000264639|PSMD3'] 138618 9968 YIDSKFEDY True H1975_Epitope_Rep2 1178.5131701928199 1178.5120699358602 43.333 2 0.10750683296023464 0.0017085592245769674 0.008003884061964435 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 6358 6421 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 29.725 2 0.10750228205129382 0.0017085592245769674 0.00800470919713635 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 209 4698 AAFGGTFKK True NCI_RA007_Epitope_Rep4 925.5021520166499 925.50104993586 24.499 2 0.10749917840235398 0.0017085592245769674 0.008005271973511894 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 86748 9863 QLLGSAHEV True PC9_epitope_Rep5 952.4977949122001 952.49668993586 42.908 2 0.10749530506076774 0.0017085592245769674 0.008005974369729016 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 41145 21422 HVDEFLTFV True PC9_epitope_Rep1 1105.54441075145 1105.5433099358602 87.238 2 0.10749339587475086 0.0017085592245769674 0.00800632060558558 ['ENSG00000142623|ENST00000375471|PADI1'] 22519 5206 ETGVPIAGR True H1975_Epitope_Rep3 898.4872302284999 898.48612993586 25.115 2 0.1074891575153137 0.0017085592245769674 0.008007089294724845 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 72840 9271 MPNGDHIVSA True PC9_epitope_Rep5 1039.47567956863 1039.4745899358602 40.609 2 0.10748556358511364 0.0017085592245769674 0.00800774116286243 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 49849 10175 KIDEHHFVAV True PC9_epitope_Rep3 1193.6193070272102 1193.61766490379 44.09 3 0.10748499349395248 0.0017085592245769674 0.0080078445708715 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 45053 20002 IPHLLGDVV True PC9_epitope_Rep5 961.55966689277 961.55856993586 81.991 2 0.1074819117965168 0.0017085592245769674 0.008008403577798504 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 21348 19293 ERFNVPVSL True PC9_epitope_Rep3 1059.5712942056298 1059.57077496793 79.432 1 0.10747496629977203 0.0017085592245769674 0.008009663599635859 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 49184 4226 KEMELPAKEA True H1975_Epitope_Rep3 1144.5798102839997 1144.5781649037901 21.374 3 0.10746687137856205 0.0017085592245769674 0.00801113238634437 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 43822 17694 IHSEPLGVVL True PC9_epitope_Rep2 1062.60734536118 1062.6062499358602 73.34 2 0.10746629593254335 0.0017085592245769674 0.008011236808300973 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 99394 19398 SHVDLVVMV True PC9_epitope_Rep1 997.52665251233 997.52554993586 79.426 2 0.10745956168190611 0.0017085592245769674 0.008012458920806017 ['ENSG00000031698|ENST00000234677|SARS1'] 141832 6294 YVDGVEVH True NCI_RA007_Epitope_Rep2 916.42904664604 916.4279499358599 29.088 2 0.10745504303236127 0.0017085592245769674 0.008013279053172099 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 135164 20661 WEMDNMLIQI True H1975_Epitope_Rep2 1291.59408044915 1291.59298993586 85.58 2 0.10745334844144758 0.0017085592245769674 0.008013586641348911 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 85783 4894 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 24.19 2 0.10744776092704997 0.0017085592245769674 0.008014600921584757 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 98943 7450 SHANSAVVL True PC9_epitope_Rep1 896.47158016436 896.47048993586 33.474 2 0.10744482782382542 0.0017085592245769674 0.008015133406209988 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 108744 16703 SYSDPPLKF True PC9_epitope_Rep3 1052.51786165044 1052.51676993586 69.381 2 0.10743939425099618 0.0017085592245769674 0.008016119923963201 ['ENSG00000169813|ENST00000682386|HNRNPF'] 58076 9039 LEIPPPKPP True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 39.756 2 0.10743208167860922 0.0017085592245769674 0.008017447777123418 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 109983 4845 TEIGSIHSA True NCI_RA007_Epitope_Rep3 913.45051036661 913.44940993586 26.043 2 0.10743077441275127 0.0017085592245769674 0.008017685179290471 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 73210 18836 MRYVASYLLA True PC9_epitope_Rep4 1185.6216155263298 1185.6205099358601 80.54 2 0.10742607796151879 0.0017085592245769674 0.00801853812041641 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 57525 9319 LEDPFNPKA True H1975_Epitope_Rep1 1029.51311062317 1029.51200993586 40.753 2 0.1074213595360208 0.0017085592245769674 0.008019395140497312 ['ENSG00000182810|ENST00000332395|DDX28', 'DDX28|p.L326F|1|0.27|ENSG00000182810|chr16:68022225-68022225|T/G|missense_variant'] 111168 8874 THGPPVQL True PC9_epitope_Rep2 847.45520182423 847.45410993586 39.488 2 0.10741896270652473 0.0017085592245769674 0.008019830516799172 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 11780 17616 DHDLQAIL True PC9_epitope_Rep2 923.47124581119 923.47014993586 73.039 2 0.10741644664511414 0.0017085592245769674 0.00802028757571543 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000477802.1_1_1:182828020-182829385:+|nuORF'] 133908 21297 VYIDQTMVL True PC9_epitope_Rep5 1080.5525329069999 1080.5514299358601 86.971 2 0.10741456942849908 0.0017085592245769674 0.008020628600683114 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 4025 20145 AHFPINVVI True PC9_epitope_Rep2 1008.5756513100799 1008.57454993586 82.9 2 0.10741083928070623 0.0017085592245769674 0.008021306280300336 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 131180 10197 VTELHVISY True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 44.163 2 0.1074088944554174 0.0017085592245769674 0.008021659630950301 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 41439 16413 HYILHNSFF True PC9_epitope_Rep4 1176.5716285587998 1176.5705299358601 71.095 2 0.10740592330770574 0.0017085592245769674 0.008022199480647661 ['ENSG00000163659|ENST00000295924|TIPARP'] 3971 13228 AHDTTLVAL True PC9_epitope_Rep2 939.50254593947 939.50144993586 56.16 2 0.10740465526502288 0.0017085592245769674 0.008022429891323698 ['ENSG00000134575|ENST00000672073|ACP2'] 49490 11653 KFDQLLAEEK True PC9_epitope_Rep5 1219.6448530687096 1219.6437499358601 49.818 2 0.10740366480738682 0.0017085592245769674 0.008022609867633477 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 74983 11191 NHQGATPLVL True PC9_epitope_Rep4 1048.56654317836 1048.5654499358602 50.825 2 0.10738663870142084 0.0017085592245769674 0.00802570429452634 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 9552 9936 AWAPKPYHKF True PC9_epitope_Rep1 1243.6502132326698 1243.64857490379 43.08 3 0.1073863248176127 0.0017085592245769674 0.008025761352461257 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 104223 15020 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 63.028 2 0.10738239375240471 0.0017085592245769674 0.00802647597633047 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 97510 4835 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 23.687 1 0.10737955332452224 0.0017085592245769674 0.008026992372668715 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 48693 17926 KAYTSQFISL True PC9_epitope_Rep2 1156.6128246644398 1156.61172993586 74.257 2 0.1073726336924873 0.0017085592245769674 0.008028250511825112 ['ENSG00000131459|ENST00000253778|GFPT2'] 110294 6930 TESQALVSA True H1975_Epitope_Rep3 904.4501760134399 904.44962496793 31.617 1 0.10737226827431251 0.0017085592245769674 0.008028316958059532 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 33356 6304 GKTVISQSL True NCI_RA007_Epitope_Rep3 931.5338460677499 931.53274993586 31.798 2 0.10737032863889893 0.0017085592245769674 0.00802866966277608 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 89718 10213 RADDTFEAL True NCI_RA007_Epitope_Rep1 1036.48253877088 1036.48197496793 43.737 1 0.10736966867428477 0.0017085592245769674 0.008028789674629316 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 21895 13893 ESDLDYIQY True H1975_Epitope_Rep2 1144.4924347482402 1144.49187496793 58.584 1 0.10736459379934447 0.0017085592245769674 0.008029712577583031 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 19449 7395 ELNITAAK True PC9_epitope_Rep1 858.4810822188999 858.47998993586 33.258 2 0.10736064944167852 0.0017085592245769674 0.008030429958395712 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 90163 5204 REDGPGIPA True H1975_Epitope_Rep2 910.4508447197799 910.44974993586 25.089 2 0.1073570316022425 0.0017085592245769674 0.008031088007984112 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'ENST00000568642.5_1_16:46706372-46712929:-|nuORF'] 97606 11309 SEEVTPIAV True H1975_Epitope_Rep2 943.4862271689899 943.48512993586 48.547 2 0.10735250958417175 0.0017085592245769674 0.008031910591935205 ['ENSG00000205339|ENST00000379719|IPO7'] 104182 20933 SQFPGAITL True PC9_epitope_Rep3 932.4967322830399 932.49562993586 85.796 2 0.1073473207621365 0.0017085592245769674 0.008032854571884232 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 14988 19543 DYIKFLRSI True PC9_epitope_Rep4 1153.64954452633 1153.64788490379 83.294 3 0.10734514010091264 0.0017085592245769674 0.00803325132207634 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 40394 4392 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 23.521 2 0.10734189260371166 0.0017085592245769674 0.008033842207768165 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 104090 13927 SQDVTTVTL True PC9_epitope_Rep6 962.4920408254201 962.49094993586 65.411 2 0.10733524811690309 0.0017085592245769674 0.008035051310063669 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF'] 140559 17491 YRPPELLL True PC9_epitope_Rep6 999.5753169569099 999.57420993586 79.907 2 0.10733414242885712 0.0017085592245769674 0.008035252529983503 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 103693 6542 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 30.191 2 0.10733281985488262 0.0017085592245769674 0.008035493226522687 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 114616 20640 TQDSSILPL True PC9_epitope_Rep1 972.5127762699999 972.51222496793 84.213 1 0.10732713664508195 0.0017085592245769674 0.00803652759859757 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 5802 12883 APEEHPVLL True PC9_epitope_Rep1 1003.5338460677498 1003.53274993586 54.428 2 0.10731943309319267 0.0017085592245769674 0.008037929887823193 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 93398 5948 RQAQAAGVSL True NCI_RA007_Epitope_Rep4 999.5461420869498 999.54504993586 29.499 2 0.10731342076948427 0.0017085592245769674 0.008039024484149487 ['ENSG00000130052|ENST00000374599|STARD8', 'nc|ENSG00000130052|Q92502|STARD8'] 56367 5811 LDDPTVPR True H1975_Epitope_Rep3 911.47124581119 911.47014993586 27.375 2 0.10731010740289648 0.0017085592245769674 0.008039627773063513 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153761151-153761283:-|nuORF'] 3955 13713 AHDPISPVL True PC9_epitope_Rep2 947.50763131991 947.50652993586 58.037 2 0.10730955415951612 0.0017085592245769674 0.008039728510389652 ['ENSG00000116199|ENST00000263733|FAM20B'] 1976 12155 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47456993586 51.772 2 0.10730913478929408 0.0017085592245769674 0.008039804872231493 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 48533 19732 KALDGFVMV True PC9_epitope_Rep5 978.5208388558999 978.51974993586 80.945 2 0.10730679270243443 0.0017085592245769674 0.008040231348528427 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 2999 18029 AFIEKHWTF True PC9_epitope_Rep5 1177.59202965021 1177.5903749037902 74.364 3 0.10730080521577588 0.0017085592245769674 0.008041321723718525 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 71731 9551 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42717496793 41.746 1 0.10729846596722405 0.0017085592245769674 0.008041747760660668 ['ENSG00000026025|ENST00000544301|VIM'] 109614 6968 TEAEIAHIA True H1975_Epitope_Rep2 953.4818104948898 953.48070993586 31.723 2 0.10729716319067271 0.0017085592245769674 0.008041985038999885 ['ENSG00000137312|ENST00000376389|FLOT1'] 44789 18110 IM[Oxidation]LEALERV True PC9_epitope_Rep2 1088.58998142532 1088.5888899358602 74.963 2 0.10729459579608788 0.0017085592245769674 0.00804245266552202 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 6708 7952 AQAPDLQRV True PC9_epitope_Rep2 996.5352430500799 996.53414993586 35.951 2 0.10729450315493097 0.0017085592245769674 0.00804246953971836 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 6800 10170 AQEPGNYEV True PC9_epitope_Rep2 1005.4403396057298 1005.43924993586 44.456 2 0.10729240733889059 0.0017085592245769674 0.00804285129290091 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 131569 21044 VTLGPVPEI True PC9_epitope_Rep1 923.53278343859 923.53168993586 85.776 2 0.10728837307258578 0.0017085592245769674 0.008043586184257014 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 1192 8058 AEATGAYVP True H1975_Epitope_Rep2 877.41814760917 877.4175949679301 35.943 1 0.10728760115096964 0.0017085592245769674 0.008043726806677939 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'nc|ENSG00000126456|Q14653-2|IRF3'] 48677 9484 KAVGSIAYL True H1975_Epitope_Rep3 920.5331177917599 920.53202993586 41.485 2 0.10728651597315879 0.0017085592245769674 0.00804392449958114 ['LDLR-SMARCA4|3|fusion', 'LDLR-SMARCA4|4|fusion', 'nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'LDLR-SMARCA4|1|fusion', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'LDLR-SMARCA4|2|fusion', 'LDLR-SMARCA4|5|fusion', 'nc|ENSG00000130164|P01130-6|LDLR', 'nc|ENSG00000130164|P01130-4|LDLR', 'ENST00000560173.1_1_19:11221401-11224126:+|nuORF'] 77131 10984 NRNELAETL True PC9_epitope_Rep5 1058.5356369729 1058.53452993586 47.239 2 0.10728255959499369 0.0017085592245769674 0.008044645294768626 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1'] 127421 21179 VNFEFPEFQL True NCI_RA007_Epitope_Rep1 1268.6077392839998 1268.60664993586 86.651 2 0.10728075349107456 0.0017085592245769674 0.008044974361625509 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 19511 15447 ELPKHYFSF True PC9_epitope_Rep4 1166.5760452329 1166.57494993586 67.349 2 0.10727948301534224 0.0017085592245769674 0.008045205846367963 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 89482 19078 QYGGDLTNTF True PC9_epitope_Rep3 1114.49310345458 1114.49200993586 78.606 2 0.10726905121243853 0.0017085592245769674 0.008047106797110844 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 90118 6943 REASDLQIAA True H1975_Epitope_Rep2 1072.5512870370399 1072.55018993586 31.626 2 0.1072621036536909 0.0017085592245769674 0.008048373066563808 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 69871 19300 LVIDAVREI True PC9_epitope_Rep1 1026.6073453611798 1026.6062499358602 79.042 2 0.10726037900252021 0.0017085592245769674 0.008048687433087348 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 26882 18116 FLDGIYVSEK True PC9_epitope_Rep5 1169.59684024713 1169.59574993586 74.694 2 0.10725710880788661 0.0017085592245769674 0.008049283551191215 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 45263 4254 IPVEQKEGA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 21.435 2 0.10724961851034726 0.0017085592245769674 0.008050649104957518 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 26541 14720 FIHQHFVEV True PC9_epitope_Rep5 1154.5872786229402 1154.5856249037902 61.619 3 0.10724477255637126 0.0017085592245769674 0.008051532688291238 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 73359 14059 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54177496793 59.231 1 0.10724283642786908 0.0017085592245769674 0.008051885736951295 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 69542 22525 LVDDNYFYL True PC9_epitope_Rep5 1160.5389910178399 1160.5378899358602 91.646 2 0.10723991711363469 0.0017085592245769674 0.00805241809553041 ['ENSG00000174231|ENST00000304992|PRPF8'] 7688 7743 ASLPLAVTK True NCI_RA007_Epitope_Rep3 898.5487678559 898.54766993586 37.579 2 0.107231627840094 0.0017085592245769674 0.008053929890972925 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 26910 21151 FLDGNEMTL True PC9_epitope_Rep1 1038.46919720586 1038.46867496793 86.19 1 0.10721687612966561 0.0017085592245769674 0.008056620980783092 ['ENSG00000169504|ENST00000374379|CLIC4'] 31453 11667 GEAPALVAV True H1975_Epitope_Rep3 825.45961849833 825.4590749679301 50.012 1 0.10721374629099514 0.0017085592245769674 0.008057192054995313 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'EPG5|p.R635Afs*6|1|0.08|ENSG00000152223|chr18:45943201-45943201|G/-|frameshift_variant'] 10119 19771 AYVGDLQTL True PC9_epitope_Rep3 978.5022115863 978.50110993586 81.277 2 0.10721031973976124 0.0017085592245769674 0.00805781731250122 ['ENSG00000065802|ENST00000264607|ASB1'] 43886 21899 IHVDFPVIL True PC9_epitope_Rep5 1051.60661708519 1051.6055299358602 89.273 2 0.1072094971894171 0.0017085592245769674 0.00805796741375481 ['ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 115269 12973 TREGGSIPVTL True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 57.795 2 0.10720869673064819 0.0017085592245769674 0.008058113486265164 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 96974 11716 SAYEFYHAL True NCI_RA007_Epitope_Rep3 1099.49746055903 1099.49636993586 53.198 2 0.10720116188363768 0.0017085592245769674 0.00805948861540961 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 30176 9907 FYQEHPDL True PC9_epitope_Rep6 1047.4661604307498 1047.4650699358601 48.617 2 0.10719673182055643 0.0017085592245769674 0.008060297219042062 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 12080 17875 DHTVGVLF True PC9_epitope_Rep4 886.45486747106 886.45376993586 76.795 2 0.10719380322096242 0.0017085592245769674 0.008060831808838419 ['ENSG00000145632|ENST00000274289|PLK2'] 105312 10209 SRPENAIIY True PC9_epitope_Rep2 1061.5505587610498 1061.54946993586 44.605 2 0.10719132365981902 0.0017085592245769674 0.008061284457385846 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 56714 16261 LDLDGIIAEVK True H1975_Epitope_Rep3 1184.66525416012 1184.66414993586 68.006 2 0.10718837312179273 0.0017085592245769674 0.008061823115579991 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 129091 13226 VQPSLFYHL True NCI_RA007_Epitope_Rep3 1102.58113061334 1102.58002993586 59.297 2 0.10717908215473577 0.0017085592245769674 0.00806351952632766 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 55681 23320 LALFPGVAL True PC9_epitope_Rep3 899.5480395799099 899.54694993586 94.979 2 0.10717263228313362 0.0017085592245769674 0.008064697392078865 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 133674 21822 VYAPPVGGFSF True PC9_epitope_Rep2 1139.56514619603 1139.56457496793 89.412 1 0.10717181471202358 0.0017085592245769674 0.008064846707518386 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 101853 13122 SLPKGVVEV True PC9_epitope_Rep3 926.54368247546 926.54258993586 55.494 2 0.10716679581785926 0.0017085592245769674 0.008065763381467497 ['ENSG00000149257|ENST00000358171|SERPINH1'] 108899 9074 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.53816993586 39.889 2 0.10716275193487143 0.0017085592245769674 0.00806650204796074 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 57807 5169 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.6020249037902 24.958 3 0.10716056440189511 0.0017085592245769674 0.008066901655773591 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 108533 15670 SYMPTVSHL True PC9_epitope_Rep3 1033.49026700361 1033.4891699358602 65.419 2 0.10715965195206813 0.0017085592245769674 0.00806706834328097 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 26283 11584 FHGDAQVAL True PC9_epitope_Rep1 956.4715801643599 956.47048993586 49.435 2 0.10715321710907365 0.0017085592245769674 0.008068243962961276 ['ENSG00000143412|ENST00000368947|ANXA9'] 134727 13146 VYTSGIYNI True NCI_RA007_Epitope_Rep5 1028.51786165044 1028.51727496793 57.243 1 0.10714445861290607 0.0017085592245769674 0.00806984437005616 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 5553 18794 AM[Oxidation]SSKFFLV True PC9_epitope_Rep1 1044.53140392004 1044.53030993586 77.077 2 0.10713519653359158 0.0017085592245769674 0.008071537127968974 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 8956 20671 AVGELLQEV True PC9_epitope_Rep1 956.51786165044 956.51676993586 84.334 2 0.10713237687145273 0.0017085592245769674 0.008072052523568515 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 57570 9901 LEDSPVISA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 43.073 1 0.10712699952973825 0.0017085592245769674 0.008073035515898165 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 45311 17513 IPYHIVNIV True PC9_epitope_Rep6 1066.6175161220601 1066.61640993586 79.993 2 0.10712112534989544 0.0017085592245769674 0.00807410946345025 ['ENSG00000031698|ENST00000234677|SARS1'] 127648 10345 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 44.673 1 0.10711409455002015 0.0017085592245769674 0.008075395051267779 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 85280 11700 QEQLWPHMEA True H1975_Epitope_Rep2 1267.56555720219 1267.56444993586 50.079 2 0.10711345904253936 0.0017085592245769674 0.008075511264082935 ['nc|ENSG00000105655|Q9NPH2-2|ISYNA1', 'ENST00000577820.5_1_19:18545725-18548921:-|nuORF', 'nc|ENSG00000105655|Q9NPH2-3|ISYNA1', 'ENSG00000105655|ENST00000338128|ISYNA1'] 9484 21697 AVVPGLLEV True PC9_epitope_Rep3 895.5378688190299 895.53676993586 88.749 2 0.10711117743550384 0.0017085592245769674 0.008075928506094779 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 23721 20196 EYFKSFNF True PC9_epitope_Rep1 1080.4916469026 1080.4905499358601 82.513 2 0.1071109994491051 0.0017085592245769674 0.008075961055695028 ['ENSG00000151470|ENST00000425929|C4orf33'] 97833 11950 SELPGAFEA True H1975_Epitope_Rep1 919.4287122928699 919.42816496793 50.97 1 0.1071108170617266 0.0017085592245769674 0.008075994410264006 ['ENSG00000126247|ENST00000246533|CAPNS1'] 85431 12618 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45471496793 53.633 1 0.10711012581111887 0.0017085592245769674 0.00807612082573275 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 72841 7417 MPNGDHIVSA True PC9_epitope_Rep6 1039.47567956863 1039.4745899358602 37.749 2 0.10710868033118387 0.0017085592245769674 0.008076385180343803 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 3525 14861 AGLQFPVGR True PC9_epitope_Rep1 943.5239500903898 943.52284993586 61.982 2 0.10710656940100045 0.0017085592245769674 0.00807677124989582 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 9085 18684 AVIGDVIRV True PC9_epitope_Rep1 940.57056592964 940.56946993586 76.658 2 0.10709060702648425 0.0017085592245769674 0.008079691196142727 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 38928 10896 HHGTSILTL True PC9_epitope_Rep2 977.52942939365 977.52832993586 47.229 2 0.10708396130899284 0.0017085592245769674 0.008080907176070276 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-5|PARPBP'] 95872 14845 RYLDEINLL True NCI_RA007_Epitope_Rep4 1147.62372370131 1147.62262993586 64.564 2 0.10706039312312407 0.0017085592245769674 0.008085220915538005 ['ENSG00000060558|ENST00000262958|GNA15'] 108046 22127 SYADQMFLL True PC9_epitope_Rep4 1086.50558271458 1086.5050749679299 93.327 1 0.10705891253425291 0.0017085592245769674 0.008085491985234394 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 31593 9091 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep3 933.4113483570098 933.4107949679301 39.956 1 0.10705326005907978 0.0017085592245769674 0.008086526934269265 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 23103 6865 EVISDEHGID True NCI_RA007_Epitope_Rep2 1112.4985827578398 1112.4974899358601 31.319 2 0.10704625486937484 0.0017085592245769674 0.008087809737955918 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 440 19920 AALPNVYEV True PC9_epitope_Rep5 974.5072969667399 974.50618993586 81.677 2 0.10704589626877797 0.0017085592245769674 0.008087875410858404 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 33783 20403 GLLAVLRPL True PC9_epitope_Rep5 950.6276868829399 950.62658993586 83.517 2 0.107034830212979 0.0017085592245769674 0.008089902263671702 ['ENSG00000168569|ENST00000307366|TMEM223'] 72070 4007 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep3 1073.5063113710098 1073.5052099358602 20.538 2 0.10702143060499242 0.0017085592245769674 0.008092357184070307 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 71908 16352 MEQISQFLQAA True H1975_Epitope_Rep1 1264.61217304144 1264.61106993586 68.257 2 0.10701741550835779 0.0017085592245769674 0.00809309292321802 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 95233 19952 RVLPDVLQV True PC9_epitope_Rep1 1037.6233297784897 1037.62222993586 81.568 2 0.10701605977908915 0.0017085592245769674 0.008093341365946976 ['nc|ENSG00000162729|Q969P0-3|IGSF8', 'ENSG00000162729|ENST00000314485|IGSF8'] 141222 5377 YTAPPLQSK True NCI_RA007_Epitope_Rep4 1003.53384606775 1003.53274993586 27.25 2 0.10700810348215853 0.0017085592245769674 0.008094799536885914 ['ENSG00000155008|ENST00000373173|APOOL'] 21274 17000 ERDSVVLSL True PC9_epitope_Rep5 1016.5502244078799 1016.54912993586 70.409 2 0.10700804361347344 0.0017085592245769674 0.00809481051013327 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 75216 13740 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 57.997 2 0.10700100444011233 0.0017085592245769674 0.008096100810313821 ['ENSG00000116285|ENST00000377482|ERRFI1'] 104646 20970 SQTDFSQLL True PC9_epitope_Rep2 1037.50293986229 1037.5023749679299 86.111 1 0.1069923343821202 0.0017085592245769674 0.008097690328697043 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 45708 17077 IRPENVIIY True PC9_epitope_Rep1 1115.6338944621898 1115.63278993586 70.513 2 0.10699229052898697 0.0017085592245769674 0.008097698369241927 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 41034 11573 HTILIVEKV True PC9_epitope_Rep2 1050.6437308699 1050.6426299358602 49.839 2 0.10698959434967101 0.0017085592245769674 0.008098192732984276 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF'] 76886 11527 NRDLATPVM True PC9_epitope_Rep5 1015.51206507735 1015.51096993586 49.335 2 0.10698679131899545 0.0017085592245769674 0.008098706719532117 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 111831 19744 TILRLLQQV True PC9_epitope_Rep4 1082.68117900778 1082.68008993586 84.069 2 0.10698471835307276 0.0017085592245769674 0.00809908685568453 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 99392 15015 SHVDLVVM[Oxidation]V True PC9_epitope_Rep4 1013.52156751233 1013.52046993586 65.692 2 0.10697350648995528 0.0017085592245769674 0.008101143161777787 ['ENSG00000031698|ENST00000234677|SARS1'] 16154 11504 EEDGFSLAS True H1975_Epitope_Rep2 953.39780608741 953.39725496793 49.307 1 0.10696542941471927 0.0017085592245769674 0.00810262484553753 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 34909 19226 GQMGSFIRL True PC9_epitope_Rep5 1007.5222358382299 1007.52112993586 78.992 2 0.10696007168379194 0.0017085592245769674 0.008103607828437226 ['ENSG00000119392|ENST00000309971|GLE1'] 96221 14172 RYPTSIASLAF True NCI_RA007_Epitope_Rep4 1224.65027280232 1224.64916993586 61.792 2 0.10695660805369557 0.0017085592245769674 0.008104243361830648 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 104012 16299 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42866993586 67.688 2 0.10694036368335638 0.0017085592245769674 0.008107224644491795 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 11895 14634 DHIQTIDSL True PC9_epitope_Rep1 1040.51383889916 1040.51274993586 61.113 2 0.10693461638944643 0.0017085592245769674 0.008108279681996186 ['nc|ENSG00000101935|Q9Y4X0-4|AMMECR1', 'nc|ENSG00000101935|Q9Y4X0-3|AMMECR1', 'ENSG00000101935|ENST00000262844|AMMECR1'] 119581 12227 VATKIFQEL True NCI_RA007_Epitope_Rep2 1047.59644632431 1047.5953499358602 52.159 2 0.10693245669286247 0.0017085592245769674 0.00810867617424705 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 137762 4945 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 24.104 2 0.10692271296803539 0.0017085592245769674 0.008110465227977462 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 40540 15082 HRFPFSSAL True PC9_epitope_Rep2 1060.5454138109599 1060.5443099358602 63.27 2 0.10691325707591583 0.0017085592245769674 0.008112201796271824 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 6270 5392 APRGDGVQVSA True PC9_epitope_Rep1 1055.5359713260698 1055.5348699358601 25.574 2 0.10690958048928155 0.0017085592245769674 0.008112877095720393 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 23770 19697 EYGPVYSTW True PC9_epitope_Rep4 1100.48147614172 1100.48097496793 83.886 1 0.10690619390131971 0.0017085592245769674 0.008113499177415493 ['ENSG00000148158|ENST00000374232|SNX30'] 121384 6377 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51676993586 29.511 2 0.10690085246222657 0.0017085592245769674 0.008114480438787583 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 132213 16920 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 70.241 2 0.10689649408265584 0.0017085592245769674 0.008115281189690947 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 118607 13092 TYSEKTTLF True PC9_epitope_Rep2 1088.5389910178399 1088.5378899358602 55.635 2 0.10689514587662122 0.0017085592245769674 0.008115528906624567 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 62988 17414 LLPNHSYVF True PC9_epitope_Rep5 1088.5654805492 1088.5643899358602 71.984 2 0.10689358348748242 0.0017085592245769674 0.008115815986290596 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 71424 11877 LYTEKFEEF True NCI_RA007_Epitope_Rep5 1204.5652057656796 1204.5641099358602 52.34 2 0.10689139850168376 0.0017085592245769674 0.008116217480787774 ['ENSG00000084652|ENST00000373610|TXLNA'] 39075 20224 HHSSVIFIF True PC9_epitope_Rep5 1085.56581490237 1085.56470993586 82.838 2 0.10688704220594805 0.0017085592245769674 0.008117018013955977 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 12757 12610 DLEKEAPWEY True H1975_Epitope_Rep1 1278.57683307854 1278.5757299358602 53.554 2 0.10687395504228213 0.0017085592245769674 0.008119423429803098 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ENSG00000125257|ENST00000645237|ABCC4'] 24482 6232 FAEGQGRAL True PC9_epitope_Rep4 947.4824792012298 947.48138993586 31.018 2 0.1068693723855012 0.0017085592245769674 0.008120265882827047 ['ENSG00000103335|ENST00000301015|PIEZO1'] 137690 6519 YEKEGEFVA True H1975_Epitope_Rep3 1070.4920408254197 1070.49147496793 30.046 1 0.1068570824133375 0.0017085592245769674 0.00812252562666998 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 95740 14717 RYGSDFYSM True PC9_epitope_Rep2 1124.45969515132 1124.4585899358601 61.876 2 0.10685184888160706 0.0017085592245769674 0.008123488094463373 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 45447 18136 IQINVGTTV True PC9_epitope_Rep3 943.53384606775 943.53274993586 74.961 2 0.10684889961303412 0.0017085592245769674 0.008124030525386171 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 77429 14703 NSLKQLYTV True PC9_epitope_Rep1 1064.5866099165999 1064.58550993586 61.375 2 0.10683292462202529 0.0017085592245769674 0.008126969260273814 ['ENSG00000135372|ENST00000257829|NAT10', 'NAT10|p.D856Tfs*36|1|0.2|ENSG00000135372|chr11:34140542-34140542|G/-|frameshift_variant', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 104983 15727 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.59957490379 65.317 3 0.10683211440008863 0.0017085592245769674 0.0081271183347572 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 116357 11747 TTEVVNELY True H1975_Epitope_Rep3 1066.51825557326 1066.51767496793 50.328 1 0.10679685060534015 0.0017085592245769674 0.008133609150649956 ['ENSG00000113719|ENST00000393784|ERGIC1'] 62749 14914 LLLPGELAK True PC9_epitope_Rep6 952.5957180483199 952.59462993586 69.361 2 0.10679656141908818 0.0017085592245769674 0.008133662400246898 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 6961 11965 AQLAHIQAL True PC9_epitope_Rep4 963.55016483823 963.54906993586 53.817 2 0.10679466387676663 0.0017085592245769674 0.008134011814417084 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 40817 7614 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.41397496793 34.241 1 0.10679408417072976 0.0017085592245769674 0.0081341185645937 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 18412 21078 EIVTTIPTI True PC9_epitope_Rep5 985.56956287013 985.56846993586 86.137 2 0.10678116157683062 0.0017085592245769674 0.008136498550842714 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 106846 6911 SVASISLTK True NCI_RA007_Epitope_Rep5 904.52294703088 904.52184993586 33.269 2 0.10677634594944196 0.0017085592245769674 0.008137385628547758 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 28052 15873 FQSDTNAML True PC9_epitope_Rep5 1025.4487961144498 1025.4476899358601 66.047 2 0.10676696839456239 0.0017085592245769674 0.008139113317854784 ['ENSG00000127337|ENST00000247843|YEATS4'] 121828 14284 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 66.836 2 0.10675872114593081 0.0017085592245769674 0.008140633055483636 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 1955 7099 AEINHSFTP True H1975_Epitope_Rep2 1014.47705946762 1014.47596993586 32.236 2 0.10675847620063166 0.0017085592245769674 0.00814067819624394 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 38071 12161 HAVGDIPGV True PC9_epitope_Rep3 863.45011644379 863.44900993586 51.814 2 0.10675846073761848 0.0017085592245769674 0.00814068104591755 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 132532 9315 VVDPNDPQM True PC9_epitope_Rep6 1013.44879611445 1013.44768993586 45.997 2 0.10675308798762487 0.0017085592245769674 0.008141671246444626 ['ENSG00000151883|ENST00000281631|PARP8'] 75425 18790 NIVNSIVGV True PC9_epitope_Rep6 913.5232813840499 913.52218993586 84.917 2 0.1067513961158484 0.0017085592245769674 0.008141983083294422 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10'] 38418 14384 HENILGFIA True H1975_Epitope_Rep2 1012.5341804209199 1012.53308993586 60.478 2 0.10674978945598003 0.0017085592245769674 0.008142279224991788 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'ENSG00000107779|ENST00000372037|BMPR1A', 'ENSG00000115170|ENST00000434821|ACVR1', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 90059 4726 READGILKP True NCI_RA007_Epitope_Rep3 997.5556441414899 997.55454993586 25.537 2 0.10674828584538276 0.0017085592245769674 0.008142556381912707 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 11773 10791 DHDITSQL True PC9_epitope_Rep2 927.42977492203 927.42866993586 46.826 2 0.10674349946501617 0.0017085592245769674 0.008143438704417486 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 120438 2743 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 14.635 2 0.10673954329018763 0.0017085592245769674 0.008144168056185546 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 111122 17268 THEPNFTII True PC9_epitope_Rep2 1070.53965972418 1070.53856993586 71.68 2 0.10673853285946318 0.0017085592245769674 0.008144354347083656 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 95809 9530 RYIPTAAAF True NCI_RA007_Epitope_Rep3 1008.5392658013599 1008.53816993586 44.574 2 0.10673619215589115 0.0017085592245769674 0.008144785913246445 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 110339 5414 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.43850993586 25.888 2 0.10672951502454729 0.0017085592245769674 0.008146017127423974 ['ENSG00000167470|ENST00000682408|MIDN'] 120346 7570 VEEENIRVV True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 34.109 2 0.10672897326036193 0.0017085592245769674 0.008146117032643266 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 10122 19767 AYVGDLQTL True PC9_epitope_Rep5 978.5022115863 978.5016649679301 81.077 1 0.10670500981881822 0.0017085592245769674 0.008150537245319068 ['ENSG00000065802|ENST00000264607|ASB1'] 17261 15887 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 65.92 2 0.10670498679221517 0.0017085592245769674 0.00815054149383714 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 62378 19087 LLGPRLVLA True PC9_epitope_Rep2 950.6276868829399 950.62658993586 78.784 2 0.10670407351336295 0.0017085592245769674 0.008150709999861836 ['ENSG00000170348|ENST00000303575|TMED10'] 89672 21785 QYVVDLTSF True PC9_epitope_Rep2 1070.5284263341398 1070.52732993586 89.266 2 0.10668244870970665 0.0017085592245769674 0.00815470090100557 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 115772 13128 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45507496793 55.618 1 0.10667749668624715 0.0017085592245769674 0.008155615071873842 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 21363 10786 ERGENYIL True PC9_epitope_Rep4 992.4927095317598 992.49160993586 49.247 2 0.10667556784511659 0.0017085592245769674 0.00815597117331841 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF'] 48056 22337 IYLTFPVAM True PC9_epitope_Rep4 1053.55689001145 1053.55578993586 94.156 2 0.10667269588188266 0.0017085592245769674 0.008156501421140272 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 12023 11039 DHSGQVTIL True PC9_epitope_Rep6 968.49270953176 968.49160993586 53.37 2 0.10667074661440534 0.0017085592245769674 0.008156861331453033 ['ENSG00000139668|ENST00000298125|WDFY2'] 124765 16765 VHDEGVWAL True PC9_epitope_Rep4 1024.4977949121999 1024.49668993586 72.453 2 0.10666873136212077 0.0017085592245769674 0.008157233441207768 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 141880 18681 YVDPVITSI True PC9_epitope_Rep6 1005.53826274185 1005.53716993586 84.5 2 0.10666724999360491 0.0017085592245769674 0.008157506981499307 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 124749 10127 VHAQIVSTL True PC9_epitope_Rep6 966.5498304850599 966.54872993586 49.569 2 0.10666118824301035 0.0017085592245769674 0.008158626398732589 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 31976 4805 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 23.571 2 0.10666108783600556 0.0017085592245769674 0.008158644942036867 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 5804 11583 APEEHPVLL True PC9_epitope_Rep4 1003.5338460677498 1003.53274993586 52.313 2 0.1066551670429137 0.0017085592245769674 0.008159738474089542 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 60530 9032 LHDINAQM True PC9_epitope_Rep1 940.4436511643601 940.44254993586 39.591 2 0.1066511823201286 0.0017085592245769674 0.008160474506034745 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 137766 4985 YENPHYQSP True H1975_Epitope_Rep3 1133.47778774361 1133.4766899358601 24.304 2 0.10664333127765165 0.0017085592245769674 0.00816192488648957 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 1422 8235 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49054993586 36.659 2 0.10664293611503738 0.0017085592245769674 0.008161997894332827 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 44260 19982 IKYPENFFLL True PC9_epitope_Rep6 1282.6961603655798 1282.6950699358601 89.525 2 0.10664147608832203 0.0017085592245769674 0.008162267645454128 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 70005 10416 LVLVGDGGTGK True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 45.004 2 0.10662880939545054 0.0017085592245769674 0.008164608274595893 ['ENSG00000132341|ENST00000543796|RAN'] 17234 14850 EHAEALLL True PC9_epitope_Rep2 894.4810822188999 894.47998993586 62.385 2 0.10662813867286983 0.0017085592245769674 0.008164732232853987 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 6188 13940 APNPIHLTV True PC9_epitope_Rep4 960.53926580136 960.53816993586 61.523 2 0.10662420092201468 0.0017085592245769674 0.008165460017013744 ['ENSG00000175390|ENST00000651655|EIF3F', 'ENST00000530219.1_1_11:8014470-8016722:+|nuORF'] 49982 8686 KITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1246.62273800457 1246.6216499358602 38.341 2 0.10662293556694082 0.0017085592245769674 0.008165693896116299 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 17231 15711 EHAEALLL True PC9_epitope_Rep1 894.4810822188999 894.47998993586 65.255 2 0.10661920725095426 0.0017085592245769674 0.008166383048674114 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 121861 14550 VFPEKGYSF True PC9_epitope_Rep4 1072.5229470308798 1072.52184993586 63.879 2 0.10661310396731535 0.0017085592245769674 0.008167511317991356 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 76828 11798 NRAQIQAVI True PC9_epitope_Rep5 1011.58252759567 1011.58142993586 50.378 2 0.10660990576278792 0.0017085592245769674 0.008168102606599194 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 43840 13554 IHSPVVNEL True PC9_epitope_Rep3 1006.54474510462 1006.54364993586 57.19 2 0.10660913102071787 0.0017085592245769674 0.008168245848222518 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 107811 11650 SVTSHIYQV True PC9_epitope_Rep5 1032.5240096600398 1032.52290993586 49.807 2 0.10660729326944736 0.0017085592245769674 0.008168585638696543 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 14950 9609 DYFEEYGK True NCI_RA007_Epitope_Rep2 1049.4341915961297 1049.4330899358602 41.991 2 0.10660685686254703 0.0017085592245769674 0.008168666330021609 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 68085 12678 LTDLYSPEY True H1975_Epitope_Rep3 1099.50735653639 1099.50677496793 53.977 1 0.1066046224935177 0.0017085592245769674 0.008169079475296905 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 88621 14773 QTEDNMLFY True H1975_Epitope_Rep3 1159.4855755459898 1159.48446993586 62.203 2 0.10660184308941388 0.0017085592245769674 0.00816959342820512 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 106063 7557 STAGLIIGK True NCI_RA007_Epitope_Rep4 858.51746772762 858.51636993586 35.715 2 0.10660157986412287 0.0017085592245769674 0.008169642104067896 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA2|p.Q205Rfs*191|1|0.14|ENSG00000104967|chr19:45940729-45940729|G/-|frameshift_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 104176 21099 SQFPGAITL True PC9_epitope_Rep1 932.4967322830399 932.49618496793 85.989 1 0.10659738300757801 0.0017085592245769674 0.008170418228386721 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 137214 11547 YAYEPADTAL True NCI_RA007_Epitope_Rep4 1112.5026055091198 1112.5015099358602 51.362 2 0.10659564019819955 0.0017085592245769674 0.008170740546851579 ['ENSG00000106541|ENST00000419304|AGR2'] 117991 9296 TYDNVHQQF True PC9_epitope_Rep1 1150.5043368446202 1150.5032299358602 40.611 2 0.10659402331454614 0.0017085592245769674 0.00817103958733055 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 91972 4993 RKQALQDTL True NCI_RA007_Epitope_Rep4 1071.60365696307 1071.60254993586 25.684 2 0.10658736571890927 0.0017085592245769674 0.00817227101189182 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 106364 20774 STIAILNSV True PC9_epitope_Rep3 916.5229470308801 916.52239496793 85.178 1 0.10658269670226227 0.0017085592245769674 0.008173134724903995 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 132705 11979 VVHDGFEGL True PC9_epitope_Rep6 971.47124581119 971.47014993586 57.347 2 0.10657683056358591 0.0017085592245769674 0.008174220016048747 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 77790 20242 NTTDIFQTV True PC9_epitope_Rep5 1037.50293986229 1037.5023749679299 82.91 1 0.10656783091934062 0.0017085592245769674 0.008175885305300166 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 2073 13784 AELDSVFSSA True H1975_Epitope_Rep2 1024.47130538084 1024.47020993586 58.165 2 0.1065641157772706 0.0017085592245769674 0.008176572848478138 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1', 'nc|ENSG00000173744|P52594-3|AGFG1', 'nc|ENSG00000173744|P52594-4|AGFG1'] 114620 20563 TQDSSILPL True PC9_epitope_Rep5 972.5127762699999 972.51222496793 84.14 1 0.10656339335900405 0.0017085592245769674 0.008176706549364044 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 134460 12939 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 54.781 2 0.10655781873087442 0.0017085592245769674 0.008177738339305102 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 21813 6975 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58569490379 35.796 3 0.10655723226179266 0.0017085592245769674 0.008177846894268703 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 73450 12296 M[Oxidation]VAPAVASV True PC9_epitope_Rep5 859.4473399429099 859.44624993586 52.287 2 0.10655373134867908 0.0017085592245769674 0.008178494939402588 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 17823 20030 EHTEVLQLL True PC9_epitope_Rep3 1080.5815245361598 1080.5804299358601 82.295 2 0.10655206364585738 0.0017085592245769674 0.008178803661034881 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 73020 20013 MRASSFLIV True PC9_epitope_Rep5 1022.5582869937799 1022.55718993586 82.033 2 0.10655014379115237 0.0017085592245769674 0.008179159074395892 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 53318 16183 KQLSDTSIIAV True PC9_epitope_Rep3 1173.6605031328502 1173.6594099358601 67.386 2 0.10654450589120333 0.0017085592245769674 0.00818020287740193 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 85714 14706 QHADPPVQIL True PC9_epitope_Rep1 1116.5927579262 1116.5916699358602 61.386 2 0.10654385696244004 0.0017085592245769674 0.00818032302856378 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 129268 12819 VQVGETFKV True PC9_epitope_Rep4 1005.5494961318899 1005.54838993586 57.171 2 0.10654323265223713 0.0017085592245769674 0.008180438623128101 ['SMAD4|p.L540Pfs*10|1|0.09|ENSG00000141646|chr18:51078424-51078430|TACTTCA/-|frameshift_variant', 'ENSG00000141646|ENST00000342988|SMAD4'] 138275 15793 YHAGVSELL True PC9_epitope_Rep5 987.50254593947 987.50144993586 65.735 2 0.10654093634052716 0.0017085592245769674 0.00818086381176668 ['ENST00000498789.1_1_21:38634223-38639601:-|nuORF'] 108124 17492 SYDPDFNQL True PC9_epitope_Rep6 1097.46655435357 1097.46544993586 79.911 2 0.10653659558820684 0.0017085592245769674 0.008181667610369894 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 76035 14416 NMDNMFESY True H1975_Epitope_Rep1 1149.41069635357 1149.4095899358601 60.648 2 0.10652757338843041 0.0017085592245769674 0.008183338539234652 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 26414 17342 FHYPGVQNL True PC9_epitope_Rep1 1073.52942939365 1073.52832993586 71.52 2 0.10652405208405391 0.0017085592245769674 0.008183990780823413 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 21711 15290 ERSPLDQVL True PC9_epitope_Rep6 1055.56112344475 1055.56002993586 70.932 2 0.1065215127911387 0.0017085592245769674 0.008184461158195091 ['ENSG00000168994|ENST00000380283|PXDC1'] 126288 7840 VLIAAHGNSLR True PC9_epitope_Rep3 1149.66184054553 1149.66019490379 35.145 3 0.10651706722881304 0.0017085592245769674 0.008185284714695632 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 73119 21568 MRLLSFVVL True PC9_epitope_Rep4 1076.64162269492 1076.64052993586 91.141 2 0.10650921382795876 0.0017085592245769674 0.008186739780725353 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|159|15.39|0.31|5.63|-|0|SSR2,None|1'] 111086 6788 THDQAVQAL True PC9_epitope_Rep3 981.4879585044899 981.48686993586 31.13 2 0.10650646025938133 0.0017085592245769674 0.008187250016681684 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 9535 7526 AVYEGHVSC True PC9_epitope_Rep5 963.4120166829099 963.41090993586 33.898 2 0.10650160448502703 0.0017085592245769674 0.008188149865793675 ['ENSG00000105887|ENST00000393085|MTPN'] 75220 14216 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 59.832 2 0.10649170767232062 0.0017085592245769674 0.008189984191295605 ['ENSG00000116285|ENST00000377482|ERRFI1'] 90600 8165 REMGQFYEA True H1975_Epitope_Rep2 1129.4862442523297 1129.4851499358601 36.357 2 0.10649040834066796 0.0017085592245769674 0.008190225045418784 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.L649Wfs*7|1|0.08|ENSG00000106608|chr7:43877517-43877517|A/-|frameshift_variant'] 7670 7280 ASITALEAK True PC9_epitope_Rep6 902.50729696674 902.50618993586 37.14 2 0.10648922607317038 0.0017085592245769674 0.008190444205558211 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 87364 20467 QPSSLLPLA True PC9_epitope_Rep2 924.5280324113199 924.52748496793 84.155 1 0.10648811581589465 0.0017085592245769674 0.008190650022111482 ['ENSG00000117984|ENST00000236671|CTSD'] 8543 3721 ATVAGVHVK True NCI_RA007_Epitope_Rep4 880.51305105352 880.51194993586 20.45 2 0.10648267801327954 0.0017085592245769674 0.008191658139528902 ['ENSG00000232838|ENST00000432901|PET117'] 60921 18297 LIALLEVLSQK True NCI_RA007_Epitope_Rep2 1225.76457427857 1225.76346993586 75.928 2 0.10646784144231966 0.0017085592245769674 0.008194409308205745 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 87380 6614 QPTSVLDKA True PC9_epitope_Rep2 957.5131106231698 957.51200993586 30.851 2 0.10646609744974332 0.0017085592245769674 0.008194732757954763 ['ENSG00000165507|ENST00000298295|DEPP1'] 97992 4091 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 20.862 2 0.10645842967862996 0.0017085592245769674 0.008196155007786766 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 137588 8199 YEEQPGLQP True H1975_Epitope_Rep2 1059.4872897981497 1059.48618993586 36.49 2 0.10645527573937964 0.0017085592245769674 0.008196740082479578 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 71998 5951 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 27.901 1 0.10644970158270758 0.0017085592245769674 0.008197774220455088 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 73011 13068 MRAFADAL True PC9_epitope_Rep6 893.4429228883698 893.44182993586 61.873 2 0.10644236982158194 0.0017085592245769674 0.008199134627050355 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 103992 22350 SQDAGIWYL True PC9_epitope_Rep1 1051.49746055903 1051.49636993586 90.784 2 0.10643946313591858 0.0017085592245769674 0.008199674022112045 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 27347 17289 FLSQPILL True H1975_Epitope_Rep1 929.5586042636099 929.55805496793 71.963 1 0.1064375152587358 0.0017085592245769674 0.00820003550975212 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 95194 13095 RVIGDLDTV True PC9_epitope_Rep2 986.53965972418 986.53856993586 55.648 2 0.10643420484987044 0.0017085592245769674 0.008200649891655077 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF'] 119869 7908 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep2 964.4688036634799 964.46770993586 35.393 2 0.10642010995266034 0.0017085592245769674 0.008203266273337988 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 126544 23321 VLLNEILEQV True PC9_epitope_Rep1 1168.67033954056 1168.66924993586 94.494 2 0.10641800474828932 0.0017085592245769674 0.008203657123366747 ['ENSG00000109805|ENST00000251496|NCAPG'] 27507 21712 FMPPGLQEL True PC9_epitope_Rep1 1030.5157534754599 1030.51464993586 88.347 2 0.10641080609836669 0.0017085592245769674 0.00820499375270146 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 105491 19189 SRYPDQWIV True PC9_epitope_Rep1 1162.57710786206 1162.5760099358602 78.605 2 0.10640883580653591 0.0017085592245769674 0.008205359628682816 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 21722 12295 ERSPVIQTL True PC9_epitope_Rep5 1041.58185888933 1041.5807699358602 52.283 2 0.10640408781416388 0.0017085592245769674 0.008206241378063531 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 109605 9011 TEAEDMISA True H1975_Epitope_Rep1 965.4011772156899 965.4006249679301 39.565 1 0.10640303738863968 0.0017085592245769674 0.008206436464856083 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 40461 9792 HRDERVLSL True PC9_epitope_Rep5 1123.60980497267 1123.60816490379 42.634 3 0.10639476894377183 0.0017085592245769674 0.008207972250333413 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 16591 9493 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39122993586 41.483 2 0.10639271987602476 0.0017085592245769674 0.008208352888107083 ['ENSG00000026025|ENST00000544301|VIM'] 25549 20052 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54732993586 83.922 2 0.10638922176998424 0.0017085592245769674 0.008209002740614944 ['ENSG00000125356|ENST00000371437|NDUFA1'] 6502 9646 APTAEGLAA True PC9_epitope_Rep1 799.4075829254699 799.40703496793 41.959 1 0.10638806845564269 0.0017085592245769674 0.0082092170057664 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 67967 16450 LTDEAFEFY True H1975_Epitope_Rep2 1133.49170647225 1133.49117496793 68.494 1 0.1063830857060258 0.0017085592245769674 0.00821014277333734 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 28055 9538 FQSKENLSV True PC9_epitope_Rep3 1050.53457434374 1050.53346993586 41.634 2 0.10638286712330884 0.0017085592245769674 0.008210183387110898 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 138773 16564 YITERIIAV True PC9_epitope_Rep4 1076.62299542532 1076.62188993586 71.688 2 0.10637828927610513 0.0017085592245769674 0.00821103401873255 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 17516 11447 EHFPQAYSV True PC9_epitope_Rep6 1076.49270953176 1076.4916099358602 55.091 2 0.10637771909165772 0.0017085592245769674 0.008211139973369743 ['ENSG00000076201|ENST00000265562|PTPN23'] 39056 15354 HHSNILLTF True PC9_epitope_Rep4 1080.5716285588 1080.5705299358601 66.991 2 0.10637266142780387 0.0017085592245769674 0.00821207987241021 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 96333 12594 RYSSMAASF True PC9_epitope_Rep3 1018.4542158480599 1018.45310993586 53.466 2 0.1063711575866197 0.0017085592245769674 0.008212359361128106 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 130655 10405 VSTEVDARL True PC9_epitope_Rep3 988.5189242795998 988.51782993586 44.963 2 0.1063683253936925 0.0017085592245769674 0.008212885748749973 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 130921 13550 VTDFIAPGY True H1975_Epitope_Rep2 981.4807478657299 981.47964993586 57.257 2 0.10636694936884347 0.0017085592245769674 0.008213141506635543 ['ENSG00000166164|ENST00000394688|BRD7', 'nc|ENSG00000166164|Q9NPI1-2|BRD7', 'ENST00000299197.6_1_13:95410637-95411129:-|nuORF'] 76889 9678 NRDLATPVM True PC9_epitope_Rep6 1015.51206507735 1015.51096993586 47.605 2 0.10636550362688808 0.0017085592245769674 0.008213410230909912 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 24020 19044 EYMLEKSFYQF True PC9_epitope_Rep6 1483.6693535643901 1483.66824993586 85.897 2 0.10636431179641465 0.0017085592245769674 0.008213631766285725 ['ENSG00000039123|ENST00000230640|MTREX'] 4130 11212 AHSPLAAQL True PC9_epitope_Rep5 906.4923156089401 906.49120993586 48.115 2 0.10635560123084004 0.0017085592245769674 0.008215251045845048 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 116001 5287 TSLDKFYRK True NCI_RA007_Epitope_Rep4 1156.6240580544797 1156.62241490379 26.887 3 0.1063531565656109 0.0017085592245769674 0.008215705560281828 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 34897 3746 GQLSVHTPK True NCI_RA007_Epitope_Rep4 965.5294293936499 965.52832993586 20.56 2 0.10635260186772214 0.0017085592245769674 0.008215808693601787 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 37803 13523 GYFGNPQKF True PC9_epitope_Rep2 1056.50288029264 1056.5017899358602 57.306 2 0.10634820921662257 0.0017085592245769674 0.008216625450131491 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 4431 11957 AIRLELQGPR True PC9_epitope_Rep1 1151.6774906096698 1151.67583490379 50.86 3 0.10634168765591188 0.0017085592245769674 0.008217838194073452 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 2492 3763 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 19.479 2 0.10633345389754828 0.0017085592245769674 0.008219369583128362 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 26231 8791 FHDSAVTSV True PC9_epitope_Rep1 961.45051036661 961.44940993586 38.655 2 0.10633128581809399 0.0017085592245769674 0.008219772867928988 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 89478 20613 QYGEVANLL True PC9_epitope_Rep5 1005.5131106231698 1005.51200993586 84.336 2 0.10632758763338095 0.0017085592245769674 0.00822046081183615 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 60681 17497 LHNDGIYIM True PC9_epitope_Rep3 1074.51681610462 1074.51570993586 72.478 2 0.10632152238188908 0.0017085592245769674 0.008221589202437131 ['ENSG00000087448|ENST00000381271|KLHL42'] 60793 13359 LHSLGSVSL True PC9_epitope_Rep4 911.50763131991 911.50652993586 59.29 2 0.10631681503596122 0.0017085592245769674 0.008222465068611606 ['ENSG00000131746|ENST00000254051|TNS4'] 41321 18730 HVVGLLTTL True PC9_epitope_Rep4 951.5753169569101 951.57420993586 80.126 2 0.10631280194694473 0.0017085592245769674 0.008223211829755106 ['ENSG00000149932|ENST00000279396|TMEM219'] 84924 12263 QEDVRLIGL True H1975_Epitope_Rep2 1041.5818588893299 1041.5807699358602 52.253 2 0.10631253998389358 0.0017085592245769674 0.008223260578472662 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 75806 20944 NLNPEFISV True PC9_epitope_Rep3 1031.5287606873098 1031.52766993586 85.839 2 0.10629779473394674 0.0017085592245769674 0.008226004971657649 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 29763 12614 FVNVVPTFGK True NCI_RA007_Epitope_Rep2 1106.6124307416198 1106.61132993586 53.679 2 0.10629568065450182 0.0017085592245769674 0.008226398517472356 ['ENSG00000149806|ENST00000529639|FAU'] 40757 18718 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.5589899358602 77.224 2 0.10629540022441077 0.0017085592245769674 0.008226450722212904 ['ENSG00000169813|ENST00000682386|HNRNPF'] 85768 8919 QHDPETSVL True PC9_epitope_Rep3 1024.48253877088 1024.4814499358602 39.258 2 0.10629042778024596 0.0017085592245769674 0.008227376443195955 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 11067 3613 DAVTYTEHAK True NCI_RA007_Epitope_Rep5 1133.53530261973 1133.5342099358602 19.859 2 0.10628160591995121 0.0017085592245769674 0.008229019057733655 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 6982 7137 AQLGEDIR True PC9_epitope_Rep3 900.46649478392 900.46538993586 32.461 2 0.10628028852374154 0.0017085592245769674 0.008229264381648952 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 40 16311 AAAAVIPTV True PC9_epitope_Rep4 811.48035394291 811.47924993586 70.701 2 0.10627373866267714 0.0017085592245769674 0.008230484193373924 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 9613 21666 AYALLSHFL True PC9_epitope_Rep1 1033.5596668927699 1033.55856993586 88.167 2 0.10626830616749758 0.0017085592245769674 0.008231496044874668 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 39527 6998 HLGALLAR True NCI_RA007_Epitope_Rep2 849.51847078713 849.51736993586 31.842 2 0.10625835638908894 0.0017085592245769674 0.008233349592060114 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 140053 6995 YQHGGVTGL True PC9_epitope_Rep2 930.4559301002199 930.45482993586 32.304 2 0.10625633496476129 0.0017085592245769674 0.008233726212933027 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1', 'ENST00000600689.1_1_19:18976320-18976969:+|nuORF'] 98299 6549 SEVPVTASA True H1975_Epitope_Rep2 859.42871229287 859.42816496793 30.101 1 0.10625350899917327 0.0017085592245769674 0.008234252759407904 ['ENST00000420416.1_3_10:14920949-14938948:+|nuORF', 'ENST00000313519.9_2_10:14920918-14938948:+|nuORF'] 14182 10412 DSDSEGPIQY True H1975_Epitope_Rep2 1109.4512982122499 1109.4502099358601 45.064 2 0.10625093126606139 0.0017085592245769674 0.008234733082389601 ['ENST00000493669.2_1_1:28733953-28817463:+|nuORF', 'nc|ENSG00000204138|Q8IZ21-3|PHACTR4', 'ENSG00000204138|ENST00000373839|PHACTR4', 'nc|ENSG00000204138|Q8IZ21-2|PHACTR4'] 85329 6294 QESPGGLEA True H1975_Epitope_Rep2 886.4032258210199 886.40267496793 29.147 1 0.10625064305752846 0.0017085592245769674 0.008234786787524961 ['ENSG00000121892|ENST00000303538|PDS5A', 'chr4:39825488-39837932|110|16.31|0.92|4.15|-|2|PDS5A,None|1'] 43896 17164 IHYENGFTI True PC9_epitope_Rep5 1092.52400966004 1092.52290993586 71.042 2 0.10624607535709575 0.0017085592245769674 0.008235637983531378 ['ENSG00000168807|ENST00000336278|SNTB2'] 137157 10359 YAVLRDAD True PC9_epitope_Rep5 921.4555957470499 921.45448993586 44.83 2 0.10624151432857724 0.0017085592245769674 0.008236488020781172 ['ENSG00000100151|ENST00000356976|PICK1'] 111637 15963 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.56467496793 66.857 1 0.10623138435869114 0.0017085592245769674 0.008238376241922243 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 31717 5122 GEGPPANPP True H1975_Epitope_Rep3 834.38718183406 834.38608993586 24.812 2 0.10622626872925052 0.0017085592245769674 0.008239329951038429 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 115033 15473 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 64.338 2 0.10622441532553874 0.0017085592245769674 0.008239675508175358 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 103711 5115 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 27.359 2 0.10621788935334683 0.0017085592245769674 0.00824089235164384 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 53948 10265 KTTTIAVEV True PC9_epitope_Rep2 960.5491617787198 960.54806993586 44.817 2 0.10620915339619144 0.0017085592245769674 0.008242521543469248 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 96420 18184 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41211496793 74.735 1 0.10620439544352238 0.0017085592245769674 0.00824340899717195 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 53885 4745 KTLDQAKAVLK True NCI_RA007_Epitope_Rep4 1213.73942215989 1213.73776490379 24.685 3 0.10620100434233855 0.0017085592245769674 0.008244041561799354 ['ENSG00000135372|ENST00000257829|NAT10', 'NAT10|p.D856Tfs*36|1|0.2|ENSG00000135372|chr11:34140542-34140542|G/-|frameshift_variant', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 44525 11780 ILMEHIHKL True PC9_epitope_Rep1 1132.64268532408 1132.64104490379 50.183 3 0.1062002404749488 0.0017085592245769674 0.008244184057508772 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 26944 4401 FLDSKHPGHY True H1975_Epitope_Rep2 1199.57235683479 1199.57071490379 22.038 3 0.10619523482561585 0.0017085592245769674 0.008245117895513786 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK'] 107731 4835 SVSGYIYHK True NCI_RA007_Epitope_Rep3 1052.52909504048 1052.5279899358602 25.997 2 0.10619280811282493 0.0017085592245769674 0.008245570651994433 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 97455 11411 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 48.872 1 0.10619140375295238 0.0017085592245769674 0.008245832677059976 ['ENSG00000135900|ENST00000258383|MRPL44'] 9865 13243 AYLHTTTTF True PC9_epitope_Rep3 1053.51311062317 1053.51200993586 55.972 2 0.10617916735737847 0.0017085592245769674 0.008248116079655768 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 17874 18481 EHVPVVIGL True PC9_epitope_Rep2 961.5596668927699 961.55856993586 76.421 2 0.10617637738619301 0.0017085592245769674 0.0082486367943217 ['ENSG00000170677|ENST00000397942|SOCS6'] 72725 7645 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep3 1057.4750115590298 1057.47390993586 34.388 2 0.10617025645535887 0.0017085592245769674 0.00824977930359417 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'TXNRD1|p.Y161C|1|0.29|ENSG00000198431|chr12:104311357-104311357|A/G|missense_variant'] 111556 9651 TIAPALVSK True PC9_epitope_Rep5 898.5487678559 898.54766993586 42.089 2 0.10616111192821993 0.0017085592245769674 0.008251486469604137 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 126234 4698 VLGPTPVQK True NCI_RA007_Epitope_Rep5 937.55966689277 937.55856993586 24.756 2 0.1061534274374413 0.0017085592245769674 0.008252921328630463 ['ENSG00000166225|ENST00000549921|FRS2'] 114248 16957 TPMSVLQQA True PC9_epitope_Rep5 973.49026700361 973.48916993586 70.244 2 0.10614534736570852 0.0017085592245769674 0.008254430310274096 ['ENSG00000167978|ENST00000301740|SRRM2'] 34991 18775 GQTEVFQAL True PC9_epitope_Rep4 991.4974605590297 991.49636993586 80.301 2 0.10613719727715541 0.0017085592245769674 0.008255952636993415 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'THOC6|p.L11V|1|0.09|ENSG00000131652|chr16:3024357-3024357|C/G|missense_variant', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 32911 17380 GHVVDIVAL True PC9_epitope_Rep2 921.52836676449 921.52726993586 72.112 2 0.10613164661151032 0.0017085592245769674 0.008256989581324564 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 47224 19180 IVAPGTFEV True PC9_epitope_Rep4 931.5014833103099 931.50038993586 81.873 2 0.10612716934537555 0.0017085592245769674 0.008257826090551779 ['ENSG00000143621|ENST00000361891|ILF2'] 111892 14586 TIPEAFRGV True PC9_epitope_Rep2 988.5341804209198 988.53308993586 61.373 2 0.10612677365974683 0.0017085592245769674 0.008257900022331498 ['ENSG00000213719|ENST00000375784|CLIC1'] 11212 4571 DEDKEKTFEEK True H1975_Epitope_Rep3 1396.6358045066397 1396.63414490379 22.703 3 0.10612624753104828 0.0017085592245769674 0.008257998327700463 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 138132 20435 YGIPAIVKL True PC9_epitope_Rep3 972.60080342876 972.59970993586 83.859 2 0.10612540383280972 0.0017085592245769674 0.0082581559722174 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 47926 13996 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.6890249037901 58.673 3 0.10612261645024589 0.0017085592245769674 0.008258676813606605 ['ENSG00000103479|ENST00000262133|RBL2'] 4122 12483 AHSPASLSF True PC9_epitope_Rep5 915.44503106335 915.44392993586 53.015 2 0.10612066202865315 0.0017085592245769674 0.008259042029441476 ['ENSG00000102699|ENST00000381989|PARP4'] 2238 11773 AENELGVVVA True H1975_Epitope_Rep3 999.5236753068698 999.52256993586 50.429 2 0.1061185633397119 0.0017085592245769674 0.008259434221323398 ['ENSG00000171311|ENST00000370902|EXOSC1'] 134807 22336 VYTVVDEMFL True PC9_epitope_Rep4 1214.5893123385397 1214.58877496793 94.153 1 0.10611687245457166 0.0017085592245769674 0.008259750218036217 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 75525 20135 NKTDVILIL True PC9_epitope_Rep5 1027.62774645259 1027.62664993586 82.497 2 0.10611168633463193 0.0017085592245769674 0.008260719485321501 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1', 'DAPK1|p.V1032Cfs*64|1|0.19|ENSG00000196730|chr9:87706165-87706165|G/-|frameshift_variant', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000472344.1_1_9:90113992-90254278:+|nuORF'] 128068 11385 VPLAIVNKA True PC9_epitope_Rep2 923.58040233735 923.57930993586 49.114 2 0.10609935425396816 0.0017085592245769674 0.008263024747088909 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 1044 8388 AEAEPPSEVV True H1975_Epitope_Rep2 1026.48695544498 1026.4858499358602 37.217 2 0.10609419966952086 0.0017085592245769674 0.00826398848798817 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 11869 15576 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52815496793 65.188 1 0.10609368290681395 0.0017085592245769674 0.00826408511190309 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 84863 5533 QEAPPPPPP True H1975_Epitope_Rep1 928.4654321547598 928.46432993586 26.347 2 0.10608967336029622 0.0017085592245769674 0.008264834850965146 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 32062 7693 GESAEVLSA True H1975_Epitope_Rep3 861.40797684829 861.4074249679301 34.572 1 0.10608895931251448 0.0017085592245769674 0.00826496837655537 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 34756 20534 GQFGVGFYSA True PC9_epitope_Rep3 1031.4712458111896 1031.4706749679299 84.247 1 0.1060869509260035 0.0017085592245769674 0.008265343952189573 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 98370 5993 SEYM[Oxidation]NNKEALP True H1975_Epitope_Rep2 1310.58126721642 1310.58016993586 28.031 2 0.10608083582600344 0.0017085592245769674 0.008266487599501842 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000515592.1_1_5:140041093-140041799:+|nuORF'] 68105 5792 LTDPDGALAK True H1975_Epitope_Rep2 999.5236753068699 999.52256993586 27.273 2 0.10607836987909333 0.0017085592245769674 0.00826694882453792 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 31480 13131 GEAPVPVLP True H1975_Epitope_Rep2 877.4909186266099 877.48982993586 55.63 2 0.1060775019943592 0.0017085592245769674 0.008267111157597573 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 30310 8529 GAAKDLPGV True PC9_epitope_Rep1 826.4548674710599 826.45376993586 37.644 2 0.10607393878645446 0.0017085592245769674 0.008267777668186932 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 74779 15068 NHDSRLWSL True PC9_epitope_Rep1 1126.55195574338 1126.5503249037902 62.778 3 0.10607385967484516 0.0017085592245769674 0.008267792466879326 ['ENSG00000118898|ENST00000345988|PPL'] 140169 15727 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51807496793 65.765 1 0.10606955645878448 0.0017085592245769674 0.008268597468974757 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 114673 12178 TQFGGKRPFGV True PC9_epitope_Rep1 1192.63529144452 1192.6336349037902 51.701 3 0.106067116263184 0.0017085592245769674 0.008269053989600704 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 88810 20648 QTVAWFPLYY True H1975_Epitope_Rep2 1286.6335601090198 1286.6324699358602 85.523 2 0.10606177118706744 0.0017085592245769674 0.00827005405060616 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 133646 16062 VYAILTHGI True PC9_epitope_Rep6 985.5596668927699 985.55856993586 74.107 2 0.10605675792771789 0.0017085592245769674 0.008270992134717737 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 128073 11833 VPLAIVNKA True PC9_epitope_Rep5 923.58040233735 923.57930993586 50.513 2 0.10604190372722737 0.0017085592245769674 0.008273772263338646 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 99160 14074 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 59.149 2 0.10603975540054973 0.0017085592245769674 0.008274174421020603 ['ENSG00000132646|ENST00000379143|PCNA'] 8288 18746 ATIGELAQV True PC9_epitope_Rep5 900.4916469025999 900.49109496793 77.118 1 0.10603145467017716 0.0017085592245769674 0.008275728459580918 ['ENSG00000198793|ENST00000361445|MTOR'] 114394 13838 TPSPLPTV True PC9_epitope_Rep6 810.4487194614601 810.44762993586 65.037 2 0.10603066799777656 0.0017085592245769674 0.008275875752676576 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 45063 12985 IPHSLPGAVAA True PC9_epitope_Rep3 1031.5763795860698 1031.5752899358602 54.973 2 0.10602851918834752 0.0017085592245769674 0.008276278099211103 ['ENSG00000160113|ENST00000291442|NR2F6'] 137873 11261 YETLTITQA True H1975_Epitope_Rep1 1038.5233409536997 1038.52277496793 48.292 1 0.10602342025971541 0.0017085592245769674 0.00827723290619427 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 85813 11456 QHDPYITSI True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 55.126 2 0.10600258534413066 0.0017392445771666721 0.008281135479711666 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 93489 8768 RQKAVSLFL True NCI_RA007_Epitope_Rep3 1060.6393141958 1060.63820993586 41.578 2 0.10599975540108252 0.0017392445771666721 0.00828166569103025 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 72247 21813 MHHWLLFEM True PC9_epitope_Rep5 1242.5678061316598 1242.5661449037902 88.936 3 0.10599801870267618 0.0017392445771666721 0.00828199109085027 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74'] 199 20507 AAFDGGFTV True PC9_epitope_Rep3 883.4075829254699 883.40703496793 84.14 1 0.10599720397000438 0.0017392445771666721 0.008282143749038988 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 32912 18459 GHVVDIVAL True PC9_epitope_Rep3 921.52836676449 921.52726993586 76.206 2 0.10599671529700373 0.0017392445771666721 0.008282235314035595 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 41229 12408 HVLEEVQQV True PC9_epitope_Rep3 1079.56112344475 1079.56002993586 52.757 2 0.10599597537369745 0.0017392445771666721 0.008282373958858731 ['ENSG00000136026|ENST00000378026|CKAP4'] 49195 6507 KEMLETQVA True H1975_Epitope_Rep3 1047.52704643515 1047.5259499358601 29.999 2 0.10598485631278338 0.0017392445771666721 0.008284457687507553 ['ENSG00000117724|ENST00000366955|CENPF'] 35682 15392 GTELGNELFY True H1975_Epitope_Rep3 1141.5291546101298 1141.52804993586 64.616 2 0.10598386912304207 0.0017392445771666721 0.008284642712739128 ['ENSG00000126821|ENST00000247225|SGPP1'] 35139 18935 GQWIAETGV True PC9_epitope_Rep5 959.4712458111899 959.47014993586 77.856 2 0.10598308678679486 0.0017392445771666721 0.008284789345883043 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 105309 5504 SRPEANEAL True PC9_epitope_Rep5 985.4828731240499 985.48176993586 26.18 2 0.10597946363799496 0.0017392445771666721 0.008285468464607799 ['ENSG00000169504|ENST00000374379|CLIC4'] 65845 17026 LSDLGLLSY True H1975_Epitope_Rep2 979.52261267771 979.52150993586 70.746 2 0.10595814083762996 0.0017392445771666721 0.00828946627126339 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 104034 4431 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 21.928 2 0.10595533347824883 0.0017392445771666721 0.008289992760746484 ['ENSG00000130935|ENST00000253247|NOL11'] 12088 6550 DHVTATQL True PC9_epitope_Rep2 883.4399456829101 883.43884993586 30.608 2 0.10595178902028836 0.0017392445771666721 0.008290657530979673 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 127654 10362 VPAGGAVAV True PC9_epitope_Rep3 739.42283906679 739.42229496793 44.801 1 0.10594169890573912 0.0017392445771666721 0.008292550233358929 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 96378 7936 RYVPRASYF True NCI_RA007_Epitope_Rep4 1157.5981776598098 1157.5970899358601 37.268 2 0.10594145086052346 0.0017392445771666721 0.008292596766887693 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 104175 21003 SQFPGAITL True PC9_epitope_Rep1 932.4967322830399 932.49618496793 85.616 1 0.10593820154390327 0.0017392445771666721 0.008293206365133015 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 38412 3066 HENESVYKA True H1975_Epitope_Rep1 1075.4934378077498 1075.4923499358601 15.602 2 0.10593480252488739 0.0017392445771666721 0.008293844094943733 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 97180 14637 SDVEAIFSK True PC9_epitope_Rep3 994.49712620586 994.49602993586 61.433 2 0.10592092649366949 0.0017392445771666721 0.008296448029755614 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 52873 11757 KPFGQVIST True PC9_epitope_Rep3 975.5389314481899 975.53782993586 50.244 2 0.1059158311013271 0.0017392445771666721 0.008297404413541183 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 84890 10445 QEASEAYLV True H1975_Epitope_Rep1 1008.4763907612797 1008.47587496793 45.131 1 0.10591545010896088 0.0017392445771666721 0.008297475928476747 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 73116 22170 MRLFLSLPV True PC9_epitope_Rep5 1074.6259726307799 1074.62486993586 90.315 2 0.10590519449269373 0.0017392445771666721 0.00829940120250404 ['ENSG00000130208|ENST00000592535|APOC1'] 46904 12172 ITLTGVHQV True PC9_epitope_Rep5 966.5498304850602 966.54872993586 51.809 2 0.10590397471352904 0.0017392445771666721 0.00829963021874262 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF'] 88247 7201 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.44387496793 32.634 1 0.10590270882413924 0.0017392445771666721 0.00829986789871229 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 74892 8601 NHHMQSISF True PC9_epitope_Rep2 1099.4869129586702 1099.48580993586 38.444 2 0.10589484819905877 0.0017392445771666721 0.008301343935134297 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 1125 7769 AEAPPAYTP True H1975_Epitope_Rep3 915.4337976733101 915.43270993586 34.868 2 0.10588786236521804 0.0017392445771666721 0.008302655918908811 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 142125 22127 YVPPELITL True PC9_epitope_Rep5 1043.59029831471 1043.58920993586 90.146 2 0.10588192169920142 0.0017392445771666721 0.008303771770632717 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 21232 10027 ERDPRSLTL True PC9_epitope_Rep5 1085.5829215184901 1085.58182993586 43.548 2 0.10588116337544 0.0017392445771666721 0.008303914219073586 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 109325 21281 TAYDNFVEL True PC9_epitope_Rep5 1070.49204082542 1070.49094993586 86.91 2 0.10586270178761074 0.0017392445771666721 0.008307382889142342 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 139932 20934 YQAPDIDVQL True PC9_epitope_Rep1 1160.57135377528 1160.5702499358601 85.344 2 0.10586074853024911 0.0017392445771666721 0.00830774996004749 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 29484 21260 FVFEPPPGV True PC9_epitope_Rep2 987.5065686907498 987.50546993586 87.237 2 0.10585611373743084 0.0017392445771666721 0.008308621027881226 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000555102.1_1_14:102508745-102509707:+|nuORF'] 69274 22845 LTTLELLEV True PC9_epitope_Rep5 1029.5957776179698 1029.59527496793 92.868 1 0.10585386238231584 0.0017392445771666721 0.008309044181659023 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 8990 8567 AVGLVLPAK True NCI_RA007_Epitope_Rep3 866.5589386167799 866.55784993586 40.771 2 0.10585343536211107 0.0017392445771666721 0.008309124444644692 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 95086 18555 RVADDVFTL True PC9_epitope_Rep2 1034.53965972418 1034.53856993586 76.722 2 0.10584721425775437 0.0017392445771666721 0.008310293851983775 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 45143 17914 IPNPAQTSVVV True PC9_epitope_Rep3 1123.62372370131 1123.62262993586 74.108 2 0.10584615203633461 0.0017392445771666721 0.008310493538080938 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 35494 4719 GSMGSFSEK True NCI_RA007_Epitope_Rep4 928.3960322656001 928.39492993586 24.582 2 0.10584154672763227 0.0017392445771666721 0.008311359339563677 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1', 'EMC1|p.D350N|1|0.27|ENSG00000127463|chr1:19238836-19238836|C/T|missense_variant'] 53319 13865 KQLSDTSIIAV True PC9_epitope_Rep6 1173.6605031328502 1173.6594099358601 65.154 2 0.10584100981385734 0.0017392445771666721 0.008311460285407721 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 31436 11339 GEAIPALAA True H1975_Epitope_Rep3 811.44396843419 811.44341496793 48.726 1 0.10583457921354077 0.0017392445771666721 0.00831266940251804 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 40090 11084 HPVLLTEA True PC9_epitope_Rep5 878.4861675993401 878.48561496793 47.623 1 0.10583434637561802 0.0017392445771666721 0.008312713185171497 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 2461 16174 AEQLMTLISA True H1975_Epitope_Rep2 1075.55834656343 1075.55724993586 67.423 2 0.10582877367499877 0.0017610801291458762 0.008313761137509352 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 138383 15919 YHGGGVYII True PC9_epitope_Rep5 977.4970666362099 977.49596993586 66.224 2 0.10582464957676004 0.0017610801291458762 0.008314536760509235 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 67407 6557 LSSPATLNSR True PC9_epitope_Rep2 1044.5563724174801 1044.55526993586 30.634 2 0.10582320654491978 0.0017610801291458762 0.008314808169305445 ['CON__P00761'] 105000 13583 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 60.141 2 0.1058150581556193 0.0017610801291458762 0.008316340897459126 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 114206 18422 TPLPVTGLSSA True PC9_epitope_Rep2 1041.5706254992901 1041.5695299358601 76.19 2 0.10581448835675425 0.0017610801291458762 0.008316448087928757 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 104801 23125 SQYPEIIFL True PC9_epitope_Rep3 1108.580461907 1108.57936993586 94.219 2 0.10580570246411855 0.0017610801291458762 0.008318101057009834 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 7254 15732 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.5233099358602 68.438 2 0.10580188985652787 0.0017610801291458762 0.00831881845560974 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 109961 9378 TEHFLTAVA True H1975_Epitope_Rep3 987.5025459394699 987.50144993586 41.072 2 0.10579582740469612 0.0017610801291458762 0.008319959318402934 ['ENSG00000130119|ENST00000360845|GNL3L'] 21773 14710 ERVPINDVL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 64.516 2 0.10578846249854892 0.0017610801291458762 0.008321345486278628 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 27926 8951 FQEETGVRV True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 41.974 2 0.10578488885053143 0.0017610801291458762 0.00832201817185346 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'WNK1|p.L900Afs*27|1|0.06|ENSG00000060237|chr12:879896-879897|TC/-|frameshift_variant'] 138507 19189 YHSFVSSVF True PC9_epitope_Rep2 1071.5025459394699 1071.5014499358601 79.183 2 0.10577438660305769 0.0017610801291458762 0.008323995365247243 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 85050 16659 QEIFYTAIV True H1975_Epitope_Rep2 1082.56481184286 1082.56370993586 69.313 2 0.10577381631463378 0.0017610801291458762 0.008324102742878104 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS', 'nc|ENSG00000119969|Q9NRZ9-6|HELLS', 'nc|ENSG00000119969|Q9NRZ9-5|HELLS'] 31645 10804 GEFQSFSSA True NCI_RA007_Epitope_Rep1 958.4032258210199 958.40267496793 46.021 1 0.10576939156814108 0.0017610801291458762 0.00832493590837303 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 100078 6569 [Acetylation]-SIRVTQKSY True NCI_RA007_Epitope_Rep5 1122.6033229262 1122.6022299358601 31.93 2 0.10576926577423203 0.0017610801291458762 0.008324959596134046 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 71245 16709 LYPLTNYTF True NCI_RA007_Epitope_Rep3 1130.56481184286 1130.56370993586 73.542 2 0.10576925339956388 0.0017610801291458762 0.008324961926363115 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 96180 7960 RYPDSHQLF True NCI_RA007_Epitope_Rep5 1161.55670677065 1161.5550749037902 37.305 3 0.10576241728314875 0.0017610801291458762 0.008326249306748513 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 140027 7454 YQEGAKMAV True PC9_epitope_Rep3 995.4746169394698 995.47350993586 33.676 2 0.10576202043110687 0.0017610801291458762 0.00832632404798167 ['ENSG00000173801|ENST00000393931|JUP'] 61984 15973 LLDPASFEY True H1975_Epitope_Rep3 1053.50187723313 1053.50137496793 66.897 1 0.10576183781556082 0.0017610801291458762 0.008326358441145326 ['ENSG00000105397|ENST00000525621|TYK2'] 99325 12557 SHSPPLLQV True PC9_epitope_Rep4 976.53418042092 976.53308993586 56.124 2 0.10575477993417239 0.0017610801291458762 0.008327687802267253 ['ENSG00000165030|ENST00000297689|NFIL3'] 74245 7151 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4601949679301 32.478 1 0.10574518943796006 0.0017610801291458762 0.008329494512146231 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 95926 7782 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 36.635 3 0.10573952463055704 0.0017610801291458762 0.008330561856665017 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 138860 13937 YKDGTELEL True PC9_epitope_Rep3 1066.51825557326 1066.51767496793 58.686 1 0.10573663875277874 0.0017610801291458762 0.008331105654958638 ['ENSG00000143815|ENST00000272163|LBR'] 53093 9526 KPQPSILQA True PC9_epitope_Rep5 980.5654805491998 980.56438993586 41.6 2 0.10573302142463484 0.0017610801291458762 0.008331787331837136 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 43090 9196 IEVVPSASA True H1975_Epitope_Rep2 871.4650978015899 871.46454496793 40.325 1 0.10573241957305389 0.0017610801291458762 0.00833190075454506 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF', 'nc|ENSG00000197958|P30050-2|RPL12'] 110061 8355 TELISTTA True H1975_Epitope_Rep2 834.43346332014 834.4329149679301 37.09 1 0.10572967392972042 0.0017610801291458762 0.008332418207122862 ['ENSG00000113141|ENST00000417647|IK'] 58077 9129 LEIPPPKPP True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 40.104 2 0.10572937706565148 0.0017610801291458762 0.00833247415691225 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 95735 16936 RYGPIVDVY True PC9_epitope_Rep5 1080.56039516876 1080.55928993586 70.16 2 0.10572783745954788 0.0017610801291458762 0.008332764331334149 ['ENSG00000154548|ENST00000452027|SRSF12', 'nc|ENSG00000188529|O75494-5|SRSF10', 'nc|ENSG00000188529|O75494-4|SRSF10', 'nc|ENSG00000188529|O75494-6|SRSF10', 'nc|ENSG00000188529|O75494-3|SRSF10', 'nc|ENSG00000188529|O75494-2|SRSF10', 'ENSG00000188529|ENST00000492112|SRSF10'] 95913 11274 RYLEKFYGL True NCI_RA007_Epitope_Rep4 1187.6338944621898 1187.63278993586 50.26 2 0.10572219431444384 0.0017610801291458762 0.008333827995880809 ['ENSG00000262406|ENST00000571244|MMP12'] 28398 14725 FRYPTTEEL True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 64.574 2 0.10571399697451993 0.0017610801291458762 0.00833537332807619 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 96031 14595 RYLPTGSFPF True NCI_RA007_Epitope_Rep4 1183.6025943339098 1183.6014899358602 63.523 2 0.10570997078971894 0.0017610801291458762 0.0083361324305526 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 106314 6165 STFSAPLNK True NCI_RA007_Epitope_Rep3 963.50254593947 963.50144993586 31.249 2 0.1057084380961444 0.0017610801291458762 0.008336421424217874 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 52869 10596 KPFGQVIST True PC9_epitope_Rep2 975.5389314481899 975.53782993586 46.073 2 0.1057056975210975 0.0017610801291458762 0.008336938191358058 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 115234 5015 TREATQAEI True PC9_epitope_Rep1 1017.5090878718897 1017.50798993586 24.149 2 0.10570251870532031 0.0017610801291458762 0.008337537632488552 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 87453 17021 QQADVRLML True PC9_epitope_Rep5 1072.56991430664 1072.5688099358601 70.489 2 0.1057011717125156 0.0017610801291458762 0.00833779165245426 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'ENST00000564350.1_1_15:89826403-89833569:+|nuORF'] 103910 12856 SQAIAFQQA True PC9_epitope_Rep5 962.4821448480601 962.48104993586 54.461 2 0.10569331500684473 0.0017610801291458762 0.008339273442173518 ['ENSG00000139168|ENST00000266529|ZCRB1'] 85863 12246 QHFDSVM[Oxidation]QL True PC9_epitope_Rep5 1119.5018946969099 1119.5007899358602 52.092 2 0.10569268126298628 0.0017610801291458762 0.00833939297852603 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 66088 5111 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 24.739 3 0.1056882608142264 0.0017610801291458762 0.008340226806561737 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 46973 9861 ITPQTIHGV True PC9_epitope_Rep5 964.5341804209198 964.53308993586 42.9 2 0.10568549795418802 0.0017610801291458762 0.008340748004848913 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 32402 9968 GFQNALIVR True H1975_Epitope_Rep3 1016.5767139392399 1016.57560993586 43.376 2 0.1056851913911486 0.0017610801291458762 0.00834080583820565 ['CON__P02769'] 134345 7868 VYPDGIRHI True PC9_epitope_Rep6 1068.5716285587998 1068.5705299358601 39.673 2 0.1056824350169747 0.0017610801291458762 0.008341325847684954 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 141131 17864 YSSEIWDLY True H1975_Epitope_Rep2 1174.51825557326 1174.51714993586 74.033 2 0.10567772185664737 0.0017610801291458762 0.00834221509101682 ['ENST00000345122.7_1_14:32559748-32559826:+|nuORF'] 127728 13258 VPAPSPLSA True PC9_epitope_Rep3 837.45961849833 837.4590749679301 56.029 1 0.1056753945407065 0.0017610801291458762 0.008342654224987273 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 99600 7726 SIFDGRVVAK True NCI_RA007_Epitope_Rep5 1090.61349337078 1090.6123899358602 36.418 2 0.10567222834751995 0.0017610801291458762 0.00834325167981228 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 54811 7794 KYPDRVPVI True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 37.782 2 0.10567150183530162 0.0017610801291458762 0.008343388777139915 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 138854 13822 YKDGTELEL True PC9_epitope_Rep1 1066.51825557326 1066.51767496793 58.01 1 0.10567020672732144 0.0017610801291458762 0.008343633177366444 ['ENSG00000143815|ENST00000272163|LBR'] 14416 19820 DTDSAYILFY True H1975_Epitope_Rep2 1206.5444703211 1206.54336993586 82.217 2 0.10566390726780762 0.0017610801291458762 0.008344822048602398 ['ENSG00000170832|ENST00000300896|USP32', 'nc|ENSG00000129204|P35125-2|USP6', 'ENST00000575709.5_1_17:5042349-5076270:+|nuORF', 'ENSG00000129204|ENST00000574788|USP6'] 127664 8781 VPAGGAVAV True PC9_epitope_Rep6 739.42283906679 739.42229496793 43.673 1 0.10564960213059141 0.0017610801291458762 0.008347522404291607 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 9701 12096 AYGHFSYEF True NCI_RA007_Epitope_Rep5 1119.46616043075 1119.4650699358601 53.184 2 0.10564484306585868 0.0017610801291458762 0.008348420951055634 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 109323 20366 TAYDNFVEL True PC9_epitope_Rep4 1070.49204082542 1070.49094993586 86.482 2 0.10564349993091332 0.0017610801291458762 0.008348674561753755 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 7719 4253 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep4 990.4618036426001 990.46070993586 22.751 2 0.10563001861346404 0.0017610801291458762 0.008351220514512547 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 39755 15634 HLVPEVPTV True PC9_epitope_Rep4 989.55458151233 989.55348993586 68.061 2 0.10562663179840352 0.0017610801291458762 0.008351860233483837 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 1273 2724 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 14.566 2 0.1056250840296844 0.0017610801291458762 0.008352152599668894 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7'] 13972 7588 DRDPASGTAL True PC9_epitope_Rep3 1001.47778774361 1001.47668993586 34.185 2 0.10561888986814891 0.0017610801291458762 0.008353322746072346 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 116742 11197 TVDNARIVL True PC9_epitope_Rep6 999.5712942056299 999.57018993586 54.044 2 0.10561739061990638 0.0017610801291458762 0.008353605994555488 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 134395 18189 VYPGDPLRF True PC9_epitope_Rep4 1062.5498304850598 1062.5487299358601 78.03 2 0.10561457021302573 0.0017610801291458762 0.00835413887064103 ['ENSG00000170892|ENST00000396388|TSEN34'] 21255 20913 ERDRLILFL True PC9_epitope_Rep1 1173.6869926642098 1173.6853349037901 85.262 3 0.10561323103389118 0.0017610801291458762 0.008354391901099576 ['ENSG00000138246|ENST00000260818|DNAJC13'] 23108 16482 EVISKLYAV True PC9_epitope_Rep1 1020.5855472874398 1020.5849749679301 68.224 1 0.10560741130565637 0.0017610801291458762 0.008355491592112206 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 11289 20912 DEHLQLISL True PC9_epitope_Rep5 1066.56587447202 1066.56476993586 85.493 2 0.10560414921900597 0.0017610801291458762 0.008356108054232649 ['ENSG00000163918|ENST00000296273|RFC4'] 100444 19642 SLAGGIIGV True PC9_epitope_Rep4 785.46470387877 785.4641549679301 83.671 1 0.10559987129582854 0.0017610801291458762 0.008356916553307723 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 90490 9902 RELENIIQET True NCI_RA007_Epitope_Rep4 1243.6408303174298 1243.63972993586 44.934 2 0.1055962709419278 0.0017610801291458762 0.008357597054641031 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF'] 28929 15662 FTDNFSFNTY True H1975_Epitope_Rep2 1254.51931820242 1254.51822993586 65.401 2 0.10559404025085037 0.0017610801291458762 0.008358018703357308 ['ENSG00000136169|ENST00000611815|SETDB2', 'nc|ENSG00000136169|Q96T68-3|SETDB2', 'nc|ENSG00000136169|Q96T68|SETDB2'] 4019 20412 AHFDGLIFV True PC9_epitope_Rep4 1017.5283667644899 1017.52726993586 86.661 2 0.10559340634168368 0.0017610801291458762 0.00835813852959555 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11', 'FBXO11|p.S292F|1|0.25|ENSG00000138081|chr2:47834638-47834638|G/A|missense_variant'] 1119 7592 AEAPPAYTP True H1975_Epitope_Rep1 915.4337976733101 915.43270993586 34.196 2 0.1055917844193169 0.0017610801291458762 0.008358445124985287 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 98107 13808 SESDYIVMP True H1975_Epitope_Rep3 1039.4532127885498 1039.4526749679299 58.417 1 0.1055899418079563 0.0017610801291458762 0.008358793450813888 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|4|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1', 'NCOR2-SCARB1|11|fusion', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'SCARB1|p.G379*|1|0.3|ENSG00000073060|chr12:124795254-124795263|GGGGATTCCC/-|frameshift_variant'] 23067 15438 EVIEKFDYV True PC9_epitope_Rep6 1140.5702911461199 1140.56918993586 71.536 2 0.10558813256581952 0.0017610801291458762 0.008359135482145235 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 8864 20140 AVFPDDM[Oxidation]PTL True PC9_epitope_Rep5 1120.51106239828 1120.50996993586 82.516 2 0.1055865976721995 0.0017610801291458762 0.008359425659345353 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 53448 7147 KRFDDKYTL True PC9_epitope_Rep2 1184.6189726740397 1184.61733490379 32.883 3 0.10558633915890464 0.0017610801291458762 0.00835947453317441 ['ENSG00000118363|ENST00000263672|SPCS2'] 2456 11104 AEQLAKWIA True H1975_Epitope_Rep2 1028.5654805491997 1028.5643899358602 47.746 2 0.10558121292654868 0.0017610801291458762 0.008360443741696602 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 49214 6842 KENEGFTVTA True H1975_Epitope_Rep2 1094.52440358286 1094.5233099358602 31.234 2 0.10558051727975162 0.0017610801291458762 0.008360575274854372 ['ENSG00000125730|ENST00000245907|C3'] 8323 4336 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 23.804 2 0.10558047039134189 0.0017610801291458762 0.008360584140604156 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 95692 16874 RYFKGPELL True PC9_epitope_Rep3 1121.6233297784897 1121.62222993586 70.063 2 0.10557464766012069 0.0017610801291458762 0.008361685184049786 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 1924 13489 AEILELAGNAA True H1975_Epitope_Rep1 1070.5607890915799 1070.56027496793 57.004 1 0.10556811861446383 0.0017610801291458762 0.008362919953296721 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 64523 18663 LPRLPVPAV True PC9_epitope_Rep4 960.6120368187999 960.61092993586 79.865 2 0.1055678533640474 0.0017610801291458762 0.008362970121008055 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 103887 17166 SQADVIPAV True PC9_epitope_Rep1 898.4759968384599 898.47488993586 70.849 2 0.10556784705032092 0.0017610801291458762 0.008362971315148111 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 45800 8077 ISDAPAPAY True H1975_Epitope_Rep3 903.43379767331 903.43324496793 36.042 1 0.10556779458036672 0.0017610801291458762 0.008362981239004271 ['ENSG00000168476|ENST00000306306|REEP4'] 35154 19235 GQWSQGLISA True PC9_epitope_Rep2 1045.5192586327698 1045.5181699358602 79.361 2 0.10556601601789159 0.0017610801291458762 0.008363317632473914 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 141939 22676 YVGEELIYL True PC9_epitope_Rep1 1097.5644774896898 1097.5633899358602 92.027 2 0.10556435897318248 0.0017610801291458762 0.00836363105405507 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 99102 11402 SHHENLVSF True PC9_epitope_Rep3 1068.49885754136 1068.49776993586 48.86 2 0.10556243615023272 0.0017610801291458762 0.008363994760409967 ['ENSG00000128791|ENST00000262120|TWSG1'] 90455 10457 REIWNQISA True NCI_RA007_Epitope_Rep5 1115.57235683479 1115.5712499358601 46.855 2 0.10555877705074908 0.0017610801291458762 0.008364686929489343 ['ENSG00000197872|ENST00000381323|CYRIA'] 71819 13942 MEIPTTIQC True H1975_Epitope_Rep1 1034.47765371458 1034.4770749679299 58.784 1 0.10555356867907012 0.0017610801291458762 0.008365672259841356 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 97863 11800 SELPTTVTV True H1975_Epitope_Rep2 945.50187723313 945.50132496793 50.465 1 0.10555289391273505 0.0017610801291458762 0.008365799921683575 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 35758 8697 GTIFGIYRK True NCI_RA007_Epitope_Rep4 1053.5971150306498 1053.5960099358601 40.243 2 0.10555021880527761 0.0017610801291458762 0.008366306054814195 ['ENSG00000165140|ENST00000375326|FBP1'] 136893 12252 YAEVGRVL True PC9_epitope_Rep1 905.4970666362099 905.49596993586 51.987 2 0.10554909121158215 0.0017610801291458762 0.008366519405551333 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 76661 10537 NQSDTSVSL True PC9_epitope_Rep2 949.43525422529 949.43414993586 45.851 2 0.1055379360286142 0.0017610801291458762 0.00836863034737544 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 71822 13930 MEIPTTIQC True H1975_Epitope_Rep3 1034.47765371458 1034.4770749679299 58.895 1 0.10552720934039177 0.0017610801291458762 0.008370660686818805 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 7505 12326 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep2 1084.4746768895598 1084.47356993586 52.496 2 0.10552301527777577 0.0017610801291458762 0.0083714546647418 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 22494 11963 ETFSYPESY True H1975_Epitope_Rep1 1121.4553209635299 1121.4542299358602 51.02 2 0.10551424516052883 0.0017610801291458762 0.00837311516975675 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 9935 14332 AYMPHTFFI True NCI_RA007_Epitope_Rep3 1125.53173789277 1125.53064993586 63.69 2 0.10551103372987194 0.0017610801291458762 0.008373723290713852 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 104185 20119 SQFPGAITL True PC9_epitope_Rep4 932.4967322830399 932.49562993586 85.523 2 0.10550725444969589 0.0017610801291458762 0.008374438994890529 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 78485 7945 NYNNQSSNF True PC9_epitope_Rep2 1086.4366512076201 1086.43554993586 35.925 2 0.10550153424703888 0.0017610801291458762 0.008375522374794823 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 132468 14428 VVDEIFNEY True H1975_Epitope_Rep3 1126.51825557326 1126.51767496793 60.852 1 0.10549638004086112 0.0017610801291458762 0.008376498673117018 ['ENSG00000100220|ENST00000216038|RTCB'] 90070 5081 REAEFTKSIA True H1975_Epitope_Rep2 1150.59823722946 1150.5965849037902 24.627 3 0.10549354886239397 0.0017610801291458762 0.008377034995278854 ['ENSG00000118363|ENST00000263672|SPCS2'] 44338 10787 ILDQKINEV True PC9_epitope_Rep4 1070.5971746003 1070.5960699358602 49.251 2 0.10548967627710198 0.0017610801291458762 0.008377768649079704 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 438 19016 AALPNVYEV True PC9_epitope_Rep4 974.5072969667399 974.50618993586 81.235 2 0.10548767498990286 0.0017610801291458762 0.008378147813308796 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 137474 4933 YEEDGARSI True H1975_Epitope_Rep3 1038.4618033262998 1038.4607099358602 24.101 2 0.10548696987849408 0.0017610801291458762 0.008378281407776427 ['ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104240622-104242055:-|nuORF'] 2541 14775 AEQPWPPLPA True H1975_Epitope_Rep2 1104.56039516876 1104.55928993586 61.991 2 0.10547906722760624 0.0017610801291458762 0.00837977882978095 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 114820 21657 TQLNMFQTL True PC9_epitope_Rep1 1094.54303085246 1094.54247496793 88.133 1 0.10547725999564952 0.0017610801291458762 0.008380121306615704 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 98923 16946 SHADVVNLL True PC9_epitope_Rep5 966.51344497634 966.51234993586 70.201 2 0.10547054747985417 0.0017610801291458762 0.008381393469994001 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 134798 20067 VYTVVDEM[Oxidation]F True PC9_epitope_Rep3 1117.50016336141 1117.49906993586 82.437 2 0.10546748801980135 0.0017610801291458762 0.008381973363890972 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 29363 11780 FVDKNNDLL True PC9_epitope_Rep4 1076.55022440788 1076.54912993586 53.078 2 0.10546742570802158 0.0017610801291458762 0.008381985174945109 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 4482 17985 AIVKEIVNI True PC9_epitope_Rep3 997.6171817688898 997.61608993586 74.383 2 0.10546593165242983 0.0017610801291458762 0.008382268374533076 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 61028 6159 LIEVDDER True NCI_RA007_Epitope_Rep5 987.4872897981498 987.48618993586 30.369 2 0.10546295587840081 0.0017610801291458762 0.008382832462627126 ['ENSG00000137154|ENST00000380394|RPS6'] 62744 17199 LLLPGELAK True PC9_epitope_Rep3 952.5957180483199 952.59462993586 71.312 2 0.10544459809019191 0.0017610801291458762 0.008386313175204134 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 21708 16226 ERSPLDQVL True PC9_epitope_Rep4 1055.56112344475 1055.56002993586 70.355 2 0.10544323540449214 0.0017610801291458762 0.00838657160149753 ['ENSG00000168994|ENST00000380283|PXDC1'] 104339 6783 SQIRETQQL True PC9_epitope_Rep5 1101.5778361380499 1101.5767299358602 31.062 2 0.10543971170194899 0.0017610801291458762 0.008387239888988488 ['nc|ENSG00000186283|Q9H497-3|TOR3A', 'ENSG00000186283|ENST00000367627|TOR3A', 'ENST00000472001.1_1_1:179057051-179060848:+|nuORF', 'nc|ENSG00000186283|Q9H497-2|TOR3A', 'ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 48477 3951 KAFNQGKIFK True NCI_RA007_Epitope_Rep3 1179.67642798051 1179.67477490379 21.909 3 0.10543686519758509 0.0017610801291458762 0.008387779779941507 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 29557 21989 FVIDGFDEL True PC9_epitope_Rep4 1053.50187723313 1053.50137496793 92.801 1 0.10542634589356391 0.0017610801291458762 0.008389775246098576 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 38857 4223 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 23.217 2 0.10542437761629521 0.0017610801291458762 0.008390148670460425 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 3991 15455 AHDVDPIEL True PC9_epitope_Rep5 1007.4923751785899 1007.49126993586 64.458 2 0.10542073011291417 0.0017610801291458762 0.008390840722274997 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 17753 6384 EHSGLTTGV True PC9_epitope_Rep5 899.43486030247 899.43376993586 29.534 2 0.10540272605604473 0.0017610801291458762 0.00839425749115054 ['ENSG00000110107|ENST00000227524|PRPF19'] 69876 17042 LVIDAVREI True PC9_epitope_Rep6 1026.6073453611798 1026.6062499358602 78.11 2 0.10539938427680573 0.0017610801291458762 0.00839489183370808 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 95982 11145 RYLEVMRKL True PC9_epitope_Rep2 1206.6906981456598 1206.68905490379 48.196 3 0.10538721059565694 0.0017610801291458762 0.008397203053947424 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 21485 6250 ERLKEAYSV True PC9_epitope_Rep2 1093.57677350889 1093.57566993586 29.438 2 0.10538622990851892 0.0017610801291458762 0.008397389267825987 ['ENSG00000174231|ENST00000304992|PRPF8'] 1609 6246 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.3870249679301 28.981 1 0.10538142083580249 0.0017610801291458762 0.008398302477006113 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 101811 12784 SLPEELQKC True PC9_epitope_Rep5 1045.51139637101 1045.51028993586 54.185 2 0.10538039183427216 0.0017610801291458762 0.008398497889591813 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 40780 16027 HRWLKGGVVL True PC9_epitope_Rep5 1163.6927467509897 1163.69110490379 66.636 3 0.1053759493147763 0.0017610801291458762 0.00839934159669846 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 137856 8464 YESLVHAVA True H1975_Epitope_Rep3 987.50254593947 987.50144993586 37.541 2 0.1053734560497405 0.0017610801291458762 0.008399815144237823 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000434185.1_1_22:41195672-41215336:-|nuORF', 'ENST00000491545.5_1_22:41213372-41215336:-|nuORF'] 109911 14364 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.4481749679301 60.401 1 0.10537204092071352 0.0017610801291458762 0.008400083932094644 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 101796 9432 SLPDFPAAAK True NCI_RA007_Epitope_Rep5 1015.5338460677499 1015.53274993586 42.917 2 0.1053685563264374 0.0017610801291458762 0.008400745826905047 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'NLRC5|p.L1674Rfs*17|1|0.22|ENSG00000140853|chr16:57077960-57077960|T/-|frameshift_variant', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'ENST00000539881.5_1_16:57068826-57081664:+|nuORF', 'ENST00000538930.5_1_16:57075247-57096263:+|nuORF'] 31777 6854 GEIASFDKA True NCI_RA007_Epitope_Rep5 936.4552613938799 936.45416993586 33.047 2 0.10536817357735286 0.0017610801291458762 0.008400818532727438 ['ENSG00000034510|ENST00000233143|TMSB10'] 36012 20333 GTYDIFYTA True PC9_epitope_Rep4 1049.47057710485 1049.47007496793 86.355 1 0.10536503262409379 0.0017610801291458762 0.008401415201287149 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 99218 15209 SHLSDQLTL True PC9_epitope_Rep1 1012.5189242796001 1012.51782993586 63.323 2 0.10536260536982654 0.0017610801291458762 0.008401876320548963 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 3265 6182 AGFAGDDAPR True PC9_epitope_Rep1 975.4410083120698 975.43990993586 28.594 2 0.10535997785811653 0.0017610801291458762 0.008402375511305361 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 70001 7863 LVLVGDGGTGK True NCI_RA007_Epitope_Rep2 1014.57095985246 1014.56986993586 35.215 2 0.10535317802003658 0.0017610801291458762 0.00840366751867391 ['ENSG00000132341|ENST00000543796|RAN'] 21222 6689 ERDPHEEIL True PC9_epitope_Rep2 1136.5462016566 1136.5445549037902 31.137 3 0.10533984903184776 0.0017610801291458762 0.008406200655863874 ['ENSG00000153140|ENST00000283122|CETN3'] 7228 10942 ARDDTHYLL True PC9_epitope_Rep5 1102.54072235334 1102.5396299358601 47.079 2 0.10533921842885605 0.0017610801291458762 0.00840632051841326 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 93426 9715 RQFLIHEL True NCI_RA007_Epitope_Rep4 1054.59236400338 1054.59126993586 44.214 2 0.10533858501617152 0.0017610801291458762 0.008406440916673703 ['ENSG00000133393|ENST00000255759|CEP20'] 49617 6240 KGDVDVSLPK True NCI_RA007_Epitope_Rep2 1056.5815245361598 1056.5804299358601 28.88 2 0.10532333964235144 0.0017610801291458762 0.008409339238181537 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 86146 9547 QIDPSIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 44.336 2 0.10532278496502682 0.0017610801291458762 0.008409444706869417 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.R165S|1|0.22|ENSG00000186081|chr12:52519802-52519802|C/A|missense_variant'] 103800 11556 SPVYVGRVV True PC9_epitope_Rep2 974.5549158654999 974.55380993586 49.775 2 0.10532184082889136 0.0017610801291458762 0.00840962423182678 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 115554 17853 TRSPLLTQL True PC9_epitope_Rep6 1027.60259433391 1027.6014899358602 81.3 2 0.10532110043146127 0.0017610801291458762 0.008409765018995055 ['ENSG00000119411|ENST00000374183|BSPRY'] 91371 16904 RHDDYLVML True PC9_epitope_Rep4 1160.5648289262 1160.56372993586 73.005 2 0.10531886292481918 0.0017610801291458762 0.008410190496470814 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 62736 10756 LLLPGELAK True NCI_RA007_Epitope_Rep3 952.5957180483199 952.59462993586 49.353 2 0.10531196969806572 0.0017610801291458762 0.008411501421771802 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 62734 11209 LLLPGELAK True H1975_Epitope_Rep3 952.5957180483199 952.59462993586 48.215 2 0.10531155092253128 0.0017610801291458762 0.00841158106910298 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 105175 15137 SRGDFVVEY True PC9_epitope_Rep1 1070.50327421546 1070.5021699358601 63.047 2 0.10530891488302392 0.0017610801291458762 0.008412082436713585 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 103909 12968 SQAIAFQQA True PC9_epitope_Rep3 962.4821448480601 962.48104993586 54.908 2 0.1053051321426707 0.0017610801291458762 0.008412801953975662 ['ENSG00000139168|ENST00000266529|ZCRB1'] 95935 11233 RYLEKPMEI True PC9_epitope_Rep2 1177.6165301458898 1177.6154299358602 48.535 2 0.10530003426351425 0.0017610801291458762 0.00841377171824464 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 30163 20631 FYPPKVELF True PC9_epitope_Rep5 1138.60628273202 1138.6051899358602 84.409 2 0.10529828454943586 0.0017610801291458762 0.008414104589335641 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 92286 21599 RLLDVLAPL True PC9_epitope_Rep5 1008.6331661861999 1008.63206993586 88.12 2 0.10529155427194646 0.0017610801291458762 0.008415385096543552 ['ENSG00000182871|ENST00000651438|COL18A1'] 62623 19706 LLLDVPTAAV True PC9_epitope_Rep6 1010.6011973515799 1010.60010993586 88.456 2 0.10528927993873664 0.0017610801291458762 0.008415817855127508 ['ENSG00000216490|ENST00000407280|IFI30'] 49944 18504 KILPTLEAV True PC9_epitope_Rep5 982.60628273202 982.60518993586 76.199 2 0.1052815838006372 0.0017610801291458762 0.008417282429919196 ['ENSG00000143621|ENST00000361891|ILF2'] 48694 18911 KAYTSQFISL True PC9_epitope_Rep3 1156.6128246644398 1156.61172993586 77.962 2 0.10528157219344073 0.0017610801291458762 0.00841728463895346 ['ENSG00000131459|ENST00000253778|GFPT2'] 100972 20337 SLFPGKLEVV True PC9_epitope_Rep5 1087.62774645259 1087.62664993586 83.261 2 0.10527812933308811 0.0017610801291458762 0.008417939894708022 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 17982 5119 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 24.766 3 0.10527028748266966 0.0017610801291458762 0.008419432562983638 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 57808 5280 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.6020249037902 25.37 3 0.10526814188626413 0.0017610801291458762 0.00841984101398407 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 141403 13539 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep3 1147.5107280451098 1147.51017496793 57.357 1 0.10525607262417339 0.0017610801291458762 0.008422138959905507 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 89331 20245 QWPPDPPLHF True PC9_epitope_Rep4 1232.59784330664 1232.59674993586 86.015 2 0.10525558699363302 0.0017610801291458762 0.00842223143491533 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 38113 16477 HAYIISSL True PC9_epitope_Rep5 902.4861675993401 902.48506993586 68.377 2 0.1052536280805856 0.0017610801291458762 0.008422604466068125 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 128554 13892 VPTANVSVVDL True H1975_Epitope_Rep3 1112.607739284 1112.60664993586 58.745 2 0.10524840437591933 0.0017610801291458762 0.00842359928144583 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF'] 93320 5556 RPSPPVQSV True PC9_epitope_Rep4 965.52942939365 965.52832993586 28.137 2 0.10524787085358615 0.0017610801291458762 0.00842370089313604 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 32244 6009 GEYRGSDFTA True NCI_RA007_Epitope_Rep5 1101.47270236317 1101.4716099358602 29.798 2 0.10524032512736807 0.0017610801291458762 0.0084251381364011 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 90719 10396 REQSWMTMA True H1975_Epitope_Rep2 1138.48994973378 1138.4888499358601 45.0 2 0.10523057956931928 0.0017610801291458762 0.00842699473335894 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 71681 6768 MEDAKVYVA True H1975_Epitope_Rep3 1024.4899326504399 1024.4888299358602 30.988 2 0.10522853107684828 0.0017610801291458762 0.0084273850355657 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 96334 12684 RYSSMAASF True PC9_epitope_Rep3 1018.4542158480599 1018.45310993586 53.812 2 0.10522796400196884 0.0017610801291458762 0.008427493084229205 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 1608 6148 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.3870249679301 28.621 1 0.10522714748435004 0.0017610801291458762 0.00842764866326886 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 98144 21555 SESPIVVVL True PC9_epitope_Rep1 941.5433481222899 941.54224993586 87.733 2 0.10522353396363018 0.0017610801291458762 0.008428337215677928 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 56095 10461 LATRSFPQL True H1975_Epitope_Rep2 1031.5763795860698 1031.5752899358602 45.254 2 0.10521717173304804 0.0017610801291458762 0.008429549663286436 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 77822 15458 NVDFDAPLGY True H1975_Epitope_Rep1 1109.5029398622898 1109.50184993586 64.73 2 0.10520455097391387 0.0017610801291458762 0.008431955292703741 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 15049 9078 DYPLEAVR True H1975_Epitope_Rep1 961.48689587533 961.48578993586 39.823 2 0.10519233827266239 0.0017610801291458762 0.008434283771485404 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 12016 12375 DHSGQVTIL True PC9_epitope_Rep2 968.49270953176 968.49160993586 52.911 2 0.10518783157588023 0.0017610801291458762 0.008435143176461159 ['ENSG00000139668|ENST00000298125|WDFY2'] 34863 22393 GQLDFSEFL True PC9_epitope_Rep4 1054.49712620586 1054.49657496793 94.368 1 0.10518525213122545 0.0017610801291458762 0.008435635101818599 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 128045 8853 VPKNSDPWAA True PC9_epitope_Rep2 1083.53490869691 1083.53380993586 39.405 2 0.10517907233462354 0.0017610801291458762 0.008436813761834534 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 49303 3433 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 17.992 2 0.10517409680127938 0.0017610801291458762 0.008437762850314142 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 6115 14732 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 61.489 2 0.10516586586117117 0.0017610801291458762 0.008439333136757265 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 6344 6564 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 30.053 2 0.10515975872276301 0.0017610801291458762 0.008440498429186209 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 128491 16614 VPSPGLPVSA True PC9_epitope_Rep1 922.5123823471799 922.51128993586 68.732 2 0.10514912512376483 0.0017610801291458762 0.008442527777109092 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 104892 7640 SRDASAVSL True PC9_epitope_Rep1 904.4614094034799 904.46030993586 34.21 2 0.10514755894138565 0.0017610801291458762 0.008442826711710073 ['ENSG00000198793|ENST00000361445|MTOR'] 59 12762 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44850496793 54.149 1 0.10514696462563818 0.0017610801291458762 0.008442940150424233 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 75221 14307 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 60.181 2 0.10513166762247389 0.0017610801291458762 0.00844586043699533 ['ENSG00000116285|ENST00000377482|ERRFI1'] 109930 14353 TEGEPPFLP True H1975_Epitope_Rep1 985.4756624852898 985.47511496793 60.401 1 0.10511081886557169 0.0017610801291458762 0.008449842150392574 ['ENSG00000241058|ENST00000377304|NSUN6'] 1311 5310 AEDRQVSITA True H1975_Epitope_Rep3 1088.5462016566 1088.5451099358602 25.501 2 0.10510354398078912 0.0017610801291458762 0.008451231939072176 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 31578 12638 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47511496793 53.712 1 0.10510284785404335 0.0017610801291458762 0.008451364938145455 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 4183 17044 AHVTLLTSL True PC9_epitope_Rep4 953.5545815123301 953.55348993586 73.553 2 0.1050997274056973 0.0017610801291458762 0.008451961142738383 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C'] 71994 5301 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 25.469 1 0.10509864218568332 0.0017610801291458762 0.008452168498437308 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 3099 10241 AGAEGFVRV True PC9_epitope_Rep6 904.4766655447999 904.47556993586 50.053 2 0.10509587660868487 0.0017610801291458762 0.008452696946270974 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 123 20045 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.5056249679301 83.082 1 0.10509141241496588 0.0017610801291458762 0.008453550033701632 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 75012 9976 NHSDLDAEL True PC9_epitope_Rep2 1012.44615326216 1012.44504993586 43.702 2 0.10508911944704061 0.0017610801291458762 0.008453988241802724 ['ENSG00000184292|ENST00000371225|TACSTD2'] 77816 15073 NVDAILEEY True H1975_Epitope_Rep2 1064.50260550912 1064.5015099358602 63.128 2 0.10507920176161606 0.0017610801291458762 0.00845588385802878 ['ENSG00000123562|ENST00000441076|MORF4L2'] 111239 18003 THIYDMSTVM True PC9_epitope_Rep5 1196.52058115572 1196.51948993586 74.266 2 0.10506982179467372 0.0017610801291458762 0.008457677073714937 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 108354 20542 SYLDSVHFF True PC9_epitope_Rep4 1113.51311062317 1113.51200993586 87.165 2 0.10506733224280403 0.0017610801291458762 0.00845815307535905 ['ENSG00000100393|ENST00000263253|EP300'] 9446 14631 AVVESMVTA True PC9_epitope_Rep3 905.4528188657299 905.45172993586 61.411 2 0.10506529759830392 0.0017610801291458762 0.008458542117975478 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 48153 12640 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 53.49 3 0.10505176628727413 0.0017610801291458762 0.008461129866230422 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 21866 11163 ESDEVELSY True H1975_Epitope_Rep3 1069.44515020265 1069.4440499358602 48.036 2 0.10505134925487694 0.0017610801291458762 0.008461209632229362 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 41371 5889 HYAHLIKTF True NCI_RA007_Epitope_Rep3 1128.6080140675201 1128.60637490379 30.141 3 0.10504136947660464 0.0017610801291458762 0.00846311868530584 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1', 'ENST00000495574.1_1_10:129046289-129055694:+|nuORF', 'ENST00000484400.5_1_10:129046280-129142589:+|nuORF'] 137691 6570 YEKEGEFVA True H1975_Epitope_Rep3 1070.4920408254197 1070.49094993586 30.228 2 0.10504069170274598 0.0017610801291458762 0.008463248353138228 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 16063 17643 EDYLSLILNR True NCI_RA007_Epitope_Rep1 1234.65575210558 1234.65464993586 72.763 2 0.10503810954978522 0.0017610801291458762 0.008463742373439019 ['CON__P02769'] 76741 20271 NQVGIVLNV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 83.394 2 0.1050224923867811 0.0017610801291458762 0.00846673085729651 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'ENST00000467287.5_1_1:151401965-151414680:-|nuORF', 'nc|ENSG00000143442|Q7Z3K3-4|POGZ'] 17478 11836 EHFNGVAEL True PC9_epitope_Rep6 1014.4770594676198 1014.47596993586 56.735 2 0.10500740402136163 0.0017610801291458762 0.008469619115098382 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B'] 107157 21393 SVIEQIVYV True PC9_epitope_Rep2 1048.580461907 1048.57936993586 87.759 2 0.10500695456377206 0.0017610801291458762 0.008469705166083355 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 76951 15193 NRDTQELLL True PC9_epitope_Rep3 1100.58258716532 1100.5814899358602 63.584 2 0.1050067539249184 0.0017610801291458762 0.008469743579703266 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 39752 17324 HLVPEVPTV True PC9_epitope_Rep3 989.55458151233 989.55348993586 71.81 2 0.10499736937329403 0.0017922898947437026 0.008471540500706264 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 118410 14864 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 62.311 2 0.1049969214745142 0.0017922898947437026 0.008471626271960799 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 1863 11938 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.4856749679301 51.075 1 0.10499374355208393 0.0017922898947437026 0.008472234858434496 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 8214 10151 ATFTGILGK True NCI_RA007_Epitope_Rep5 906.5174677276199 906.51636993586 45.679 2 0.104992426375329 0.0017922898947437026 0.008472487116049674 ['nc|ENSG00000167995|O76090-3|BEST1', 'ENST00000534553.5_1_11:61722629-61730618:+|nuORF'] 11805 5737 DHFASVHSV True PC9_epitope_Rep4 997.46174375665 997.46064993586 28.894 2 0.1049846975621075 0.0017922898947437026 0.008473967436546815 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 54919 11460 KYPSDLPYM True NCI_RA007_Epitope_Rep5 1112.5212327787199 1112.52012993586 50.729 2 0.10498048939750784 0.0017922898947437026 0.008474773542300435 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG'] 99161 14169 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 59.511 2 0.10497782860724797 0.0017922898947437026 0.00847528327486164 ['ENSG00000132646|ENST00000379143|PCNA'] 48047 17305 IYLRDPVQV True PC9_epitope_Rep5 1101.61824439805 1101.6171499358602 71.568 2 0.10496626200205526 0.0017922898947437026 0.008477499453798441 ['TPP2|p.A1140Lfs*43|1|0.1|ENSG00000134900|chr13:102674367-102674367|G/-|frameshift_variant', 'nc|ENSG00000134900|P29144|TPP2', 'ENSG00000134900|ENST00000376052|TPP2'] 133129 20207 VVQPLLVSV True PC9_epitope_Rep4 952.5957180483199 952.59516496793 85.864 1 0.10496549527929193 0.0017922898947437026 0.00847764637873061 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 1740 11692 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 50.048 1 0.10496059358493984 0.0017922898947437026 0.008478585734553934 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 134393 19472 VYPGDPLRF True PC9_epitope_Rep3 1062.5498304850598 1062.5487299358601 80.129 2 0.10495090876954512 0.0017922898947437026 0.008480442017270903 ['ENSG00000170892|ENST00000396388|TSEN34'] 7190 9715 AQYEHDLEV True PC9_epitope_Rep6 1102.4931034545798 1102.49200993586 47.769 2 0.10494969735957203 0.0017922898947437026 0.008480674234994328 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 76693 19327 NQSGQVFGL True PC9_epitope_Rep3 948.4664947839199 948.46538993586 79.563 2 0.10494943625511254 0.0017922898947437026 0.008480724287458094 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 14056 16208 DRNAVIVAL True PC9_epitope_Rep4 969.5607295219299 969.55962993586 70.288 2 0.10494200774796035 0.0017922898947437026 0.008482148415446575 ['nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 7725 2551 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep6 990.4618036426001 990.46070993586 14.741 2 0.10493962437454202 0.0017922898947437026 0.008482605383554316 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 21568 10831 ERQDLTTAL True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 46.979 2 0.10493579988069654 0.0017922898947437026 0.008483338709540681 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ENST00000474428.6_1_1:155922555-155932010:-|nuORF'] 26409 20546 FHYIFNVQL True PC9_epitope_Rep4 1179.6076797143498 1179.60658993586 87.181 2 0.10493284552180737 0.0017922898947437026 0.00848390523360768 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3', 'ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 96088 20018 RYLTVATVF True PC9_epitope_Rep5 1068.59678067748 1068.59568993586 82.051 2 0.10493140446473416 0.0017922898947437026 0.008484181582065905 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 14340 5184 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 24.792 2 0.1049294930605106 0.0017922898947437026 0.008484548141358336 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 22441 6725 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54316490379 30.782 3 0.10492812661278654 0.0017922898947437026 0.008484810201027848 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 117286 14796 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59944993586 61.733 2 0.10492747651424345 0.0017922898947437026 0.008484934880765686 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 31550 9103 GEDYDERVLP True H1975_Epitope_Rep1 1191.54078192299 1191.53968993586 39.918 2 0.10492669408095996 0.0017922898947437026 0.008485084942778432 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 43664 20230 IHDGFGFML True PC9_epitope_Rep4 1035.48478770035 1035.4836899358602 85.955 2 0.1049243389561803 0.0017922898947437026 0.00848553664495741 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 109830 5713 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 26.973 2 0.10492079740588438 0.0017922898947437026 0.00848621594167528 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 58073 9232 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 40.467 2 0.10490868952884592 0.0018134715025906736 0.008488538721187098 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 72041 18502 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.55197496793 76.77 1 0.1049000559196529 0.0018134715025906736 0.008490195369375227 ['ENSG00000198712|ENST00000361739|MT-CO2'] 41607 8994 IADPNIAKL True H1975_Epitope_Rep1 953.55458151233 953.55348993586 39.501 2 0.10489965218220142 0.0018134715025906736 0.008490272847589892 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 98926 14543 SHADVVNLL True PC9_epitope_Rep6 966.51344497634 966.51234993586 67.833 2 0.10489509800415994 0.0018134715025906736 0.008491146852712553 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 90083 4521 REAEHLYHTL True NCI_RA007_Epitope_Rep3 1267.6309343400699 1267.62928490379 24.641 3 0.10488767518401705 0.0018134715025906736 0.00849257157248695 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 4188 12899 AHWQFETAL True NCI_RA007_Epitope_Rep4 1101.5243440132099 1101.5232499358601 56.705 2 0.10487284159923296 0.0018134715025906736 0.00849541938701072 ['ENSG00000185262|ENST00000327490|UBALD2', 'ENSG00000153443|ENST00000283474|UBALD1'] 108460 19736 SYLSSILRF True PC9_epitope_Rep6 1084.59169529704 1084.5905899358602 88.572 2 0.10486433304702604 0.0018134715025906736 0.008497053309455757 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1', 'ENST00000529795.1_1_11:66001292-66002875:+|nuORF'] 76881 11685 NRDLATPVM True PC9_epitope_Rep3 1015.51206507735 1015.51096993586 49.966 2 0.10485863364868746 0.0018134715025906736 0.00849814795080961 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 140795 8666 YSDKYGLGY True H1975_Epitope_Rep1 1064.48147614172 1064.4803699358602 38.263 2 0.10485484720783138 0.0018134715025906736 0.008498875259530133 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 75594 9579 NLDPAVHEV True PC9_epitope_Rep2 992.49270953176 992.49160993586 42.19 2 0.10485250520567546 0.0018134715025906736 0.008499325146937088 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'ENST00000503738.5_1_2:27851561-27855513:+|nuORF', 'ENST00000461249.1_1_2:27852141-27855513:+|nuORF', 'ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 43838 12515 IHSPVVNEL True PC9_epitope_Rep2 1006.54474510462 1006.54364993586 53.446 2 0.10485074822274949 0.0018134715025906736 0.008499662669986658 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 40492 6716 HRDNAGYTAL True PC9_epitope_Rep5 1116.5312202987998 1116.53012993586 30.804 2 0.10484244272619682 0.0018134715025906736 0.00850125836172645 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 77784 20014 NTTDIFQTV True PC9_epitope_Rep2 1037.50293986229 1037.50184993586 82.388 2 0.1048373052180186 0.0018134715025906736 0.008502245548609259 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 38973 16335 HHIYLEGTLL True PC9_epitope_Rep4 1194.6397081186199 1194.63805490379 70.794 3 0.10483482301351289 0.0018134715025906736 0.008502722550803234 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 86745 9840 QLLGSAHEV True PC9_epitope_Rep1 952.4977949122001 952.49668993586 42.711 2 0.10482698139563372 0.0018134715025906736 0.008504229633986614 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 62655 18326 LLLGRLTGVAG True PC9_epitope_Rep4 1068.6655289436399 1068.6644299358602 78.559 2 0.1048215901031375 0.0018134715025906736 0.00850526593734271 ['SIRPB1|p.A50Pfs*7|1|0.21|ENSG00000101307|chr20:1578623-1578623|C/-|frameshift_variant', 'ENST00000565775.1_1_20:1558831-1600590:-|nuORF', 'ENST00000381596.1_1_20:1586507-1600590:-|nuORF', 'nc|ENSG00000101307|O00241-2|SIRPB1', 'nc|ENSG00000101307|Q5TFQ8|SIRPB1', 'ENSG00000101307|ENST00000381605|SIRPB1'] 129195 9496 VQSNRILGV True PC9_epitope_Rep6 984.5716285587998 984.57052993586 46.781 2 0.1048204751215253 0.0018134715025906736 0.00850548027201232 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 110997 13655 THASQIELL True PC9_epitope_Rep2 1010.5396597241798 1010.53856993586 57.816 2 0.10481166877032748 0.0018134715025906736 0.00850717331331151 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 45182 10453 IPQLNSKAV True PC9_epitope_Rep5 968.5654805492 968.56438993586 45.194 2 0.10480939471005074 0.0018134715025906736 0.008507610559288975 ['ENSG00000157456|ENST00000288207|CCNB2'] 104003 13263 SQDARFYAL True PC9_epitope_Rep6 1069.51925863277 1069.5181699358602 62.667 2 0.10480549029622518 0.0018134715025906736 0.008508361332651416 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 97460 11583 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 49.618 2 0.10480350694757834 0.0018134715025906736 0.00850874273193052 ['ENSG00000135900|ENST00000258383|MRPL44'] 74556 20288 NFTNVAATF True PC9_epitope_Rep1 983.4712458111899 983.47014993586 82.864 2 0.10479818496098862 0.0018134715025906736 0.008509766234790748 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 115435 7298 TRMNEEQIAA True PC9_epitope_Rep5 1161.54482175761 1161.54372993586 33.034 2 0.10479810300808928 0.0018134715025906736 0.008509781996565375 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 104939 19900 SRDELLQVL True PC9_epitope_Rep1 1071.59242357303 1071.5913299358601 81.363 2 0.10479579401893654 0.0018134715025906736 0.00851022608960724 ['ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'ENSG00000187446|ENST00000334660|CHP1'] 103423 8681 SPPPPPPPP True PC9_epitope_Rep5 881.4647038787699 881.46360993586 38.333 2 0.1047935046821559 0.0018134715025906736 0.008510666424869506 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 42445 7971 IEDVPAPST True H1975_Epitope_Rep3 927.45492704071 927.45382993586 35.632 2 0.10479138112300102 0.0018134715025906736 0.008511074893746537 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF'] 99158 13871 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 58.375 2 0.1047906287729074 0.0018134715025906736 0.008511219613615712 ['ENSG00000132646|ENST00000379143|PCNA'] 86870 16575 QLREAFEQL True PC9_epitope_Rep1 1132.5876725457597 1132.58656993586 68.578 2 0.10478676368862828 0.0018134715025906736 0.008511963127261993 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ZWINT|p.A199Qfs*76|1|0.22|ENSG00000122952|chr10:56358833-56358833|C/-|frameshift_variant', 'ENSG00000122952|ENST00000373944|ZWINT', 'ZWINT|p.Q139H|1|0.08|ENSG00000122952|chr10:56359693-56359693|C/A|missense_variant'] 98980 20033 SHDEVFVVL True PC9_epitope_Rep1 1043.52876068731 1043.52766993586 81.884 2 0.10477600648802686 0.0018134715025906736 0.008514032783697766 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 4136 12969 AHSVQPLSL True PC9_epitope_Rep3 950.51853035678 950.51742993586 54.912 2 0.10477380991267113 0.0018134715025906736 0.008514455458380425 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 99278 9225 SHQTGVVAL True PC9_epitope_Rep1 910.4872302284999 910.48612993586 40.336 2 0.10476695755930884 0.0018134715025906736 0.008515774148000277 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 114670 14580 TQFAEKFQEV True PC9_epitope_Rep5 1225.59790287629 1225.5968099358602 61.083 2 0.10475697307769742 0.0018134715025906736 0.00851769594637912 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3'] 140111 7916 YQNQEIHNL True PC9_epitope_Rep4 1157.5465360097699 1157.54542993586 37.879 2 0.10475258761530608 0.0018134715025906736 0.008518540185574972 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 7935 5057 ATAPPSPLK True NCI_RA007_Epitope_Rep4 880.50181766348 880.50072993586 25.951 2 0.10475184280491966 0.0018134715025906736 0.008518683575968645 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766-6|RREB1', 'ENST00000475946.5_1_6:7182144-7211943:+|nuORF'] 107356 20094 SVLGSLSSV True PC9_epitope_Rep5 847.4650978015901 847.46454496793 82.338 1 0.10474766292307723 0.0018134715025906736 0.008519488327070989 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF', 'nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 62936 22797 LLPDYYLVTV True PC9_epitope_Rep5 1194.65362684726 1194.65252993586 92.679 2 0.10474509338842342 0.0018134715025906736 0.00851998307491206 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 3523 9995 AGLQFPVGR True NCI_RA007_Epitope_Rep5 943.5239500903898 943.52284993586 45.087 2 0.10473017284210373 0.0018134715025906736 0.008522856478955173 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 122546 4998 VGEVIVTK True H1975_Epitope_Rep1 843.50656869075 843.50546993586 24.297 2 0.10472584360696469 0.0018134715025906736 0.008523690378991283 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 49300 3225 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 16.969 2 0.10472341580673052 0.0018134715025906736 0.008524158057760396 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 75595 10215 NLDPAVHEV True PC9_epitope_Rep5 992.49270953176 992.49160993586 44.28 2 0.10472249613511464 0.0018134715025906736 0.008524335224946108 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'ENST00000503738.5_1_2:27851561-27855513:+|nuORF', 'ENST00000461249.1_1_2:27852141-27855513:+|nuORF', 'ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 85033 12908 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.53750993586 54.764 2 0.10471841594044161 0.0018134715025906736 0.008525121283655006 ['ENSG00000139233|ENST00000266604|LLPH'] 17510 13753 EHFPQAYSV True PC9_epitope_Rep3 1076.49270953176 1076.4916099358602 57.982 2 0.10471746507563039 0.0018134715025906736 0.008525304479920988 ['ENSG00000076201|ENST00000265562|PTPN23'] 12433 13107 DIVMTQSPDSL True NCI_RA007_Epitope_Rep4 1204.56455414268 1204.56344993586 57.517 2 0.10470457593355263 0.0018134715025906736 0.008527788111465791 ['nc|ENSG00000211598|P06312|IGKV4-1'] 114572 17335 TQDGNIYQL True PC9_epitope_Rep1 1050.4981888350198 1050.49767496793 71.494 1 0.10469761177669014 0.0018134715025906736 0.008529130336669419 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 136894 12045 YAEVGRVL True PC9_epitope_Rep1 905.4970666362099 905.49596993586 51.191 2 0.10469014420093323 0.0018134715025906736 0.00853056981319002 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 49901 22103 KIIDIFTTL True PC9_epitope_Rep1 1062.6324974798601 1062.6314099358601 89.831 2 0.10468860392061453 0.0018134715025906736 0.008530866752176423 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 106505 9708 STLPAITLK True NCI_RA007_Epitope_Rep3 942.5749826037401 942.57388993586 45.26 2 0.10467791852305018 0.0018134715025906736 0.00853292698277778 ['ENSG00000117984|ENST00000236671|CTSD'] 114992 19901 TRADLIFTV True PC9_epitope_Rep5 1034.5760452328998 1034.57494993586 81.603 2 0.1046690083628834 0.0018134715025906736 0.008534645299146104 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 141942 21657 YVGEELIYL True PC9_epitope_Rep4 1097.5644774896898 1097.5633899358602 91.495 2 0.10466858601823413 0.0018134715025906736 0.008534726756190865 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 76052 13528 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 57.172 2 0.10466843782403709 0.0018134715025906736 0.008534755338383626 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 74259 5730 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 27.039 2 0.10465256240031104 0.0018134715025906736 0.008537817762134007 ['ENSG00000167658|ENST00000309311|EEF2'] 8917 13938 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6965849037902 58.448 3 0.10464429514788129 0.0018134715025906736 0.008539412961893662 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 45068 10905 IPHSLPGAVAA True PC9_epitope_Rep6 1031.5763795860698 1031.5752899358602 52.812 2 0.10463985173585902 0.0018134715025906736 0.008540270454606732 ['ENSG00000160113|ENST00000291442|NR2F6'] 17546 17744 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.52857496793 76.274 1 0.1046373096321482 0.0018134715025906736 0.008540761068766011 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 100736 10969 SLDVGGPLRY True H1975_Epitope_Rep3 1075.56620882519 1075.5651099358602 47.283 2 0.10463305195089402 0.0018134715025906736 0.008541582842097621 ['ENSG00000176894|ENST00000317479|PXMP2'] 21220 7926 ERDPHEEIL True PC9_epitope_Rep1 1136.5462016566 1136.5445549037902 35.311 3 0.10462471717691428 0.0018134715025906736 0.0085431917535458 ['ENSG00000153140|ENST00000283122|CETN3'] 8237 8226 ATGENLPRV True PC9_epitope_Rep4 955.5086939490699 955.50758993586 39.103 2 0.10461422405285377 0.0018134715025906736 0.008545217718641928 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 31881 11032 GELLFVHSA True NCI_RA007_Epitope_Rep4 971.50763131991 971.50652993586 49.307 2 0.10461316832149099 0.0018134715025906736 0.00854542158007111 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 32843 10535 GHNAIINTL True PC9_epitope_Rep6 951.5137793295102 951.51268993586 51.315 2 0.10461103065960392 0.0018134715025906736 0.008545834376301298 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 87432 16013 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.4631649679301 66.584 1 0.10461059172165783 0.0018134715025906736 0.008545919140408571 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 95234 19406 RVLPDVLQV True PC9_epitope_Rep2 1037.6233297784897 1037.62222993586 80.023 2 0.10461011729453791 0.0018134715025906736 0.008546010758804026 ['nc|ENSG00000162729|Q969P0-3|IGSF8', 'ENSG00000162729|ENST00000314485|IGSF8'] 114322 22783 TPQSIFIFA True PC9_epitope_Rep5 1022.5436824754598 1022.5425899358601 92.627 2 0.10459634478222002 0.0018134715025906736 0.008548670831866518 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 8869 22037 AVFPDDMPTL True PC9_epitope_Rep3 1104.51614739828 1104.5150499358601 90.063 2 0.10459136534423014 0.0018134715025906736 0.008549632774551733 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 136897 12200 YAEVGRVL True PC9_epitope_Rep5 905.4970666362099 905.49596993586 51.913 2 0.10459132099037727 0.0018134715025906736 0.008549641343428987 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 54752 16414 KYMVYPQTF True PC9_epitope_Rep2 1175.5685173243098 1175.56740993586 68.379 2 0.10458743061635667 0.0018134715025906736 0.00855039297063439 ['ENSG00000112996|ENST00000507110|MRPS30'] 74891 8503 NHHMQSISF True PC9_epitope_Rep2 1099.4869129586702 1099.48580993586 38.072 2 0.10458695341202288 0.0018134715025906736 0.00855048517173812 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 1548 9892 AEEPWGEEA True H1975_Epitope_Rep3 1016.4087051242799 1016.4081749679301 43.08 1 0.10458614352957399 0.0018134715025906736 0.008550641652085229 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 99307 9743 SHSELIHNL True PC9_epitope_Rep3 1048.5301576696402 1048.5290699358602 42.43 2 0.10458541889271432 0.0018134715025906736 0.008550781664154582 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 99841 18528 SILFVPTSAPR True PC9_epitope_Rep5 1186.6710082468999 1186.66990993586 76.292 2 0.1045837658113535 0.0018134715025906736 0.008551101075619301 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 40670 9821 HRQEIQVVL True PC9_epitope_Rep6 1120.63529144452 1120.6341899358601 48.239 2 0.10457588549027348 0.0018134715025906736 0.008552623883665452 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 21858 10274 ESDDGVVVY True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 44.525 1 0.10456493217558825 0.0018134715025906736 0.00855474095587027 ['ENSG00000137628|ENST00000393743|DDX60'] 96525 11199 SADPNVVDL True H1975_Epitope_Rep3 928.45017601344 928.44906993586 48.174 2 0.10456423829568315 0.0018134715025906736 0.008554875086932564 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 96861 4989 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 26.789 2 0.10456367540820075 0.0018134715025906736 0.00855498389787549 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 53395 17384 KQVEEIFNL True PC9_epitope_Rep6 1118.5971746003 1118.5960699358602 79.483 2 0.10456361299245752 0.0018134715025906736 0.008554995963452034 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 11976 10239 DHNVSSVAI True PC9_epitope_Rep5 940.46140940348 940.46030993586 44.371 2 0.10455339503278913 0.0018134715025906736 0.008556971416073731 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 121699 11813 VFLENVIR True H1975_Epitope_Rep3 988.5705659296399 988.56946993586 50.586 2 0.10454697571183945 0.0018134715025906736 0.008558212696803139 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 28903 9894 FTDGQQLY True H1975_Epitope_Rep1 970.43961132974 970.4390649679301 42.992 1 0.10454025478267372 0.0018134715025906736 0.008559512483932994 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 115842 10284 TSDVGGYYY True H1975_Epitope_Rep1 1023.4185415319901 1023.41797496793 44.502 1 0.10453830822399368 0.0018134715025906736 0.008559888972076378 ['ENSG00000131711|ENST00000296755|MAP1B'] 31952 16309 GENPLQVLV True H1975_Epitope_Rep3 967.5338460677499 967.53329496793 68.206 1 0.10453492687308259 0.0018134715025906736 0.00856054300435333 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 35859 14035 GTMEWIMIK True NCI_RA007_Epitope_Rep5 1107.54567370475 1107.5445699358602 60.676 2 0.10453440196595794 0.0018134715025906736 0.00856064453796469 ['ENSG00000168273|ENST00000477703|UQCC5'] 140774 7172 YSDGPNPEV True H1975_Epitope_Rep2 976.4137905047199 976.41324496793 32.52 1 0.10452990575859575 0.0018134715025906736 0.008561514293868944 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 90874 6289 REVDPPMGP True H1975_Epitope_Rep3 996.4698659121999 996.46876993586 29.196 2 0.10452767398527384 0.0018134715025906736 0.008561946044393625 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 23745 17675 EYGIFNQKI True PC9_epitope_Rep2 1110.57095985246 1110.5698699358602 73.266 2 0.10452572865925643 0.0018134715025906736 0.008562322396969359 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 120355 8051 VEEFKSIPA True H1975_Epitope_Rep2 1018.5335117145798 1018.53240993586 35.917 2 0.10452377266911729 0.0018134715025906736 0.008562700828716385 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 106635 6034 STSNSFNLK True NCI_RA007_Epitope_Rep1 996.48762415132 996.48652993586 27.512 2 0.10451721589847864 0.0018134715025906736 0.00856396950567404 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 11975 9158 DHNVSSVAI True PC9_epitope_Rep4 940.46140940348 940.46030993586 42.819 2 0.10451199127565114 0.0018134715025906736 0.008564980553223033 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 14968 13492 DYFEQYGK True PC9_epitope_Rep3 1048.4501760134401 1048.44906993586 56.947 2 0.10451085484276182 0.0018134715025906736 0.008565200486243192 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 6141 10765 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 46.725 2 0.1045093950477055 0.0018134715025906736 0.008565483007272433 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 96906 12834 SAVFMVTRL True H1975_Epitope_Rep2 1022.5582869937799 1022.55718993586 54.476 2 0.1045085868636149 0.0018134715025906736 0.008565639422808281 ['ENST00000380189.8_1_12:50527593-50531570:-|nuORF', 'nc|ENSG00000139624|Q8N5B7-2|CERS5', 'ENSG00000139624|ENST00000317551|CERS5', 'ENST00000547138.5_1_12:50529516-50531570:-|nuORF', 'ENST00000546676.1_1_12:50529513-50531570:-|nuORF'] 31556 13130 GEEDLFVSA True H1975_Epitope_Rep2 965.43419159613 965.43364496793 55.626 1 0.10450834568663944 0.0018134715025906736 0.008565686100608889 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 1208 11586 AEDAVPTLTP True H1975_Epitope_Rep2 1012.50769088956 1012.50658993586 49.63 2 0.10450776651880322 0.0018134715025906736 0.00856579819473236 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1'] 43826 16975 IHSEPLGVVL True PC9_epitope_Rep4 1062.60734536118 1062.6062499358602 73.284 2 0.10449974396408743 0.0018134715025906736 0.008567351052484904 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 14191 16354 DSDWFAENY True H1975_Epitope_Rep2 1145.43016884485 1145.42906993586 68.124 2 0.10449424801199961 0.0018134715025906736 0.00856841501344843 ['ENSG00000138029|ENST00000317799|HADHB', 'nc|ENSG00000138029|P55084-2|HADHB'] 97740 11014 SEILYSAPP True H1975_Epitope_Rep2 975.49131254943 975.4907649679301 47.393 1 0.10449330698700487 0.0018134715025906736 0.008568597199145675 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 125008 17366 VIAEILRGV True PC9_epitope_Rep6 968.6018660579199 968.60076993586 79.413 2 0.10448765057599024 0.0018134715025906736 0.008569692378380045 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 6337 5693 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 26.719 2 0.10448061213630525 0.0018134715025906736 0.008571055330242404 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 40499 13682 HRDSGILGL True PC9_epitope_Rep3 966.5246783663799 966.52358993586 57.697 2 0.10448030220857663 0.0018134715025906736 0.008571115350688593 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 2002 5527 AEIRAINEA True H1975_Epitope_Rep2 985.51925863277 985.51816993586 26.267 2 0.1044791164510738 0.0018134715025906736 0.008571344987613583 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 10955 13611 DAGVIAGL True H1975_Epitope_Rep3 714.39120458534 714.39065496793 57.642 1 0.10447310779432539 0.0018134715025906736 0.008572508730857811 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 2754 8526 AETLAPVQA True H1975_Epitope_Rep2 898.47599683846 898.47544496793 37.751 1 0.10446685815448814 0.0018134715025906736 0.008573719308334622 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1', 'WWTR1|p.M267I|1|0.44|ENSG00000018408|chr3:149527940-149527940|C/A|missense_variant', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 89499 22261 QYILFPLRF True PC9_epitope_Rep2 1195.67536535135 1195.6742699358601 91.106 2 0.10446676097172372 0.0018134715025906736 0.008573738134279607 ['ENSG00000101407|ENST00000373447|TTI1'] 37571 19560 GVVPQLVKL True PC9_epitope_Rep3 951.6117024656298 951.61060993586 80.472 2 0.10445599591311952 0.0018134715025906736 0.008575823754226164 ['ENSG00000182481|ENST00000330459|KPNA2'] 18903 6540 ELEDEEERDQR True NCI_RA007_Epitope_Rep1 1446.62227970082 1446.62062490379 29.452 3 0.1044505882950923 0.0018134715025906736 0.008576871608920067 ['ENSG00000253797|ENST00000521776|UTP14C'] 108160 15417 SYFSGSHMF True PC9_epitope_Rep6 1061.4276667470501 1061.42656993586 71.458 2 0.10444826896988653 0.0018134715025906736 0.008577321071095741 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 70979 15450 LYGRNFNYL True PC9_epitope_Rep6 1158.5821932425 1158.58108993586 71.586 2 0.10444356813003718 0.0018134715025906736 0.008578232116601038 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 6275 5389 APRGDGVQVSA True PC9_epitope_Rep5 1055.5359713260698 1055.5348699358601 25.742 2 0.10443793745115343 0.0018134715025906736 0.008579323491861926 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 25686 8979 FEQKGFRLV True H1975_Epitope_Rep2 1122.6185787512197 1122.61748993586 39.492 2 0.10443455984493805 0.0018134715025906736 0.008579978225793022 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 72028 11410 METEVIEQV True H1975_Epitope_Rep2 1076.5059766374 1076.5048699358601 48.938 2 0.10442940400867122 0.0018134715025906736 0.008580977754333195 ['ENSG00000113716|ENST00000502717|HMGXB3'] 31325 15970 GDLGIEIPAEK True PC9_epitope_Rep2 1140.60265390356 1140.60154993586 66.682 2 0.10442838427919461 0.0018134715025906736 0.00858117545593262 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 128709 13266 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 55.892 2 0.10442792998162811 0.0018134715025906736 0.00858126353497257 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 140761 17044 YSDFFTDCY True H1975_Epitope_Rep2 1159.41682727983 1159.41627496793 70.816 1 0.10442208501263187 0.0018134715025906736 0.008582396832873958 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 45327 20457 IQALISGIEA True PC9_epitope_Rep5 1013.57571087973 1013.57517496793 83.725 1 0.10441896408452345 0.0018134715025906736 0.00858300201755291 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 31287 20606 GDIEQFLITG True PC9_epitope_Rep3 1091.54989005471 1091.54937496793 84.529 1 0.10441587063823646 0.0018134715025906736 0.008583601913667964 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 38511 5994 HERPEFIA True NCI_RA007_Epitope_Rep4 997.4981292653698 997.49702993586 29.674 2 0.10441051292444076 0.0018134715025906736 0.008584641002888624 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 60759 13191 LHSDLEYTV True PC9_epitope_Rep2 1075.51858992643 1075.51748993586 56.017 2 0.10440609303683732 0.0018134715025906736 0.008585498298636344 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 44305 16719 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52488993586 69.546 2 0.1044051221945756 0.0018134715025906736 0.008585686617377245 ['ENSG00000138160|ENST00000260731|KIF11'] 73004 14429 MRAFADAL True PC9_epitope_Rep2 893.4429228883698 893.44182993586 60.77 2 0.10440246168861378 0.0018134715025906736 0.008586202708313109 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 74157 9035 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.5032299358602 39.745 2 0.10440216924857043 0.0018134715025906736 0.008586259438310258 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 77734 4357 NTNPNFVR True NCI_RA007_Epitope_Rep5 960.4777281739599 960.47662993586 23.371 2 0.10440187625508932 0.0018134715025906736 0.008586316276029304 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 38450 7302 HENVSVIP True H1975_Epitope_Rep2 893.4606811274899 893.45958993586 33.025 2 0.10440066483574299 0.0018134715025906736 0.008586551282750616 ['ENST00000551440.1_1_12:100594629-100598862:+|nuORF', 'ENST00000550813.5_1_12:100594629-100599999:+|nuORF', 'nc|ENSG00000075089|Q9GZN1-2|ACTR6', 'ENSG00000075089|ENST00000188312|ACTR6'] 88642 11050 QTELGNQLEY True H1975_Epitope_Rep3 1193.5564319871298 1193.5558749679299 47.594 1 0.10439977350040318 0.0018134715025906736 0.008586724199403931 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 21410 17530 ERINNINIL True PC9_epitope_Rep3 1097.61930702721 1097.61820993586 72.613 2 0.10439858556384207 0.0018134715025906736 0.008586954661098496 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 90785 4631 RESKVVVPP True NCI_RA007_Epitope_Rep2 1009.5920296502098 1009.59092993586 22.638 2 0.10439652128675891 0.0018134715025906736 0.008587355148475074 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 25372 10227 FEALEKIAA True H1975_Epitope_Rep2 990.5385970950198 990.53750993586 44.343 2 0.1043962109904279 0.0018134715025906736 0.008587415350164634 ['ENSG00000134202|ENST00000361066|GSTM3', 'ENST00000488824.1_1_1:110279695-110282569:-|nuORF'] 89514 20999 QYLDVLHAL True PC9_epitope_Rep3 1070.5760452329 1070.57494993586 86.049 2 0.10439591697559004 0.0018134715025906736 0.00858747239339842 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-3|TBC1D7'] 98186 6857 SETEATPVP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 31.333 1 0.10438787334977156 0.0018134715025906736 0.008589033117265067 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 68199 14176 LTDTFTAYY True H1975_Epitope_Rep3 1093.49679185269 1093.49627496793 59.863 1 0.10438617699404008 0.0018134715025906736 0.0085893623000217 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 133826 12750 VYGFLRNGF True NCI_RA007_Epitope_Rep3 1071.5501648382299 1071.5490699358602 57.389 2 0.10438203580407371 0.0018134715025906736 0.008590165960906605 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 38931 13406 HHGYSYIL True PC9_epitope_Rep3 988.4766655448 988.47556993586 56.598 2 0.10437710827805166 0.0018134715025906736 0.008591122316437216 ['ENSG00000134531|ENST00000256951|EMP1'] 21808 9353 ERYKEVAEL True PC9_epitope_Rep5 1135.5873381925899 1135.58569490379 40.932 3 0.10436997292042577 0.0018134715025906736 0.008592507358879394 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 17481 7189 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.53465490379 32.465 3 0.10436484345944794 0.0018134715025906736 0.008593503169853354 ['ENSG00000162378|ENST00000294353|ZYG11B'] 98233 8492 SEVATLTAA True H1975_Epitope_Rep2 861.4443623570099 861.44381496793 37.617 1 0.1043637569447313 0.0018134715025906736 0.008593714115275502 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 142183 4713 YVTTSTRTY True NCI_RA007_Epitope_Rep5 1090.5294889633 1090.52838993586 24.813 2 0.10436169071615119 0.0018134715025906736 0.008594115284606673 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 41033 18236 HTILDLPAV True PC9_epitope_Rep6 977.55458151233 977.55348993586 82.786 2 0.10435529736893243 0.0018134715025906736 0.008595356701200643 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 21796 9418 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58569490379 41.085 3 0.10435381656026389 0.0018134715025906736 0.008595644259122463 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 71525 20907 MAAAWPLLL True H1975_Epitope_Rep1 984.5466596809199 984.5461149679301 86.863 1 0.1043435916780289 0.0018134715025906736 0.008597630079239239 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 54480 18907 KYGSVIQLL True PC9_epitope_Rep4 1019.60153170475 1019.60042993586 80.812 2 0.10433474404505878 0.0018134715025906736 0.008599348773516025 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 1113 5030 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.39082993586 24.428 2 0.10433312919131614 0.0018134715025906736 0.008599662502081844 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 71674 13749 MECPGVFAA True H1975_Epitope_Rep2 923.3881104341898 923.3875649679301 58.031 1 0.10432425765109224 0.0018134715025906736 0.008601386232503894 ['ENST00000343411.7_1_16:84150358-84150463:-|nuORF'] 48150 18993 IYPPINVLPSL True NCI_RA007_Epitope_Rep4 1224.71181042972 1224.7107099358602 82.151 2 0.10431897693724762 0.0018134715025906736 0.008602412427022765 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 53413 14174 KQWFNLNSL True NCI_RA007_Epitope_Rep3 1148.59784330664 1148.59674993586 63.042 2 0.10431855387563346 0.0018134715025906736 0.008602494645148949 ['nc|ENSG00000066427|P54252-1|ATXN3', 'ATXN3|p.P140Qfs*3|1|0.14|ENSG00000066427|chr14:92088786-92088786|G/-|frameshift_variant', 'ENST00000553309.5_1_14:92547307-92572896:-|nuORF', 'ATXN3|p.D307Gfs*11|1|0.06|ENSG00000066427|chr14:92071008-92071009|-/T|frameshift_variant', 'nc|ENSG00000066427|P54252-4|ATXN3', 'ENSG00000066427|ENST00000644486|ATXN3', 'ENST00000555816.5_1_14:92547404-92563043:-|nuORF', 'ENST00000554214.5_1_14:92547307-92562474:-|nuORF', 'ENST00000555958.5_1_14:92547307-92572896:-|nuORF', 'nc|ENSG00000066427|P54252-3|ATXN3'] 2667 6845 AESPEEVAC True H1975_Epitope_Rep2 933.37496246785 933.3744149679301 31.245 1 0.10431507138131214 0.0018134715025906736 0.00860317146452991 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 6154 10379 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 47.622 2 0.10430987033100553 0.0018134715025906736 0.008604182378902803 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 89087 17883 QVPDDLPNV True PC9_epitope_Rep2 995.4923751785899 995.49126993586 74.088 2 0.10430755132005243 0.0018134715025906736 0.008604633155724422 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 17911 7092 EIAENALGK True PC9_epitope_Rep5 943.4974605590298 943.49636993586 32.245 2 0.10430645015484002 0.0018134715025906736 0.008604847211715543 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 142534 12297 YYITTRVQF True NCI_RA007_Epitope_Rep5 1189.6131590176099 1189.61206993586 53.951 2 0.1043047364988896 0.0018134715025906736 0.008605180340232317 ['ENSG00000000938|ENST00000374005|FGR'] 142901 20872 YYVDFFKTL True PC9_epitope_Rep4 1194.5961119711399 1194.5950099358602 88.44 2 0.10429886359865874 0.0018134715025906736 0.008606322104835045 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 109411 7676 TDEKIVLSA True H1975_Epitope_Rep3 974.5284263341399 974.5273299358599 34.508 2 0.10429685534511493 0.0018134715025906736 0.008606712567627534 ['nc|ENSG00000101353|Q9H579-2|MROH8', 'ENSG00000101353|ENST00000343811|MROH8'] 40707 7849 HRSGIESAL True PC9_epitope_Rep1 968.5039429218 968.50284993586 35.017 2 0.10427942082261579 0.0018134715025906736 0.008610103060627228 ['ENSG00000114446|ENST00000264538|IFT57'] 28287 12226 FRPLYTHEY True PC9_epitope_Rep5 1224.5927579261997 1224.5916699358602 52.015 2 0.10427391466941563 0.0018134715025906736 0.008611174109413136 ['ENSG00000008952|ENST00000337002|SEC62'] 140385 20926 YREDLDFVL True PC9_epitope_Rep1 1168.5764391557198 1168.57534993586 85.313 2 0.10427025476807215 0.0018134715025906736 0.008611886098865816 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 17861 14512 EHVLTTVTL True PC9_epitope_Rep4 1011.56006081559 1011.55896993586 63.734 2 0.10426606617516859 0.0018134715025906736 0.008612701008290116 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 90362 13490 REGDLLFTVA True NCI_RA007_Epitope_Rep4 1119.5924235730301 1119.5913299358601 59.099 2 0.1042629300276203 0.0018134715025906736 0.008613311208301293 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 16159 8508 EEDIRDLAA True H1975_Epitope_Rep1 1030.4931034545798 1030.49200993586 37.656 2 0.104260057798753 0.0018134715025906736 0.008613870094128685 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 29665 22044 FVLDKVPFL True PC9_epitope_Rep3 1076.6270181766 1076.62592993586 90.089 2 0.10424975982049373 0.0018134715025906736 0.00861587418828856 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 82738 5762 PRIASNAGSIA True NCI_RA007_Epitope_Rep4 1055.57235683479 1055.5712499358601 28.784 2 0.10424890180266466 0.0018134715025906736 0.008616041187747068 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF'] 99177 5751 SHITPSTQQHL True PC9_epitope_Rep3 1247.62584895963 1247.62420490379 27.193 3 0.10424692637292268 0.0018134715025906736 0.008616425685404577 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 134722 12652 VYTSGIYNI True NCI_RA007_Epitope_Rep3 1028.51786165044 1028.51676993586 57.01 2 0.1042431087323334 0.0018134715025906736 0.008617168797727425 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 8592 4065 ATVTPSPVK True NCI_RA007_Epitope_Rep4 898.5123823471799 898.51128993586 21.908 2 0.10424258586223907 0.0018134715025906736 0.008617270580362772 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 49029 4972 KEFPSQASP True NCI_RA007_Epitope_Rep4 989.4818104948898 989.48070993586 25.596 2 0.10424095133018922 0.0018134715025906736 0.008617588768145947 ['ENSG00000138641|ENST00000402738|HERC3', 'ENST00000506714.5_1_4:89300148-89319290:+|nuORF', 'nc|ENSG00000138642|Q8IVU3-3|HERC6', 'nc|ENSG00000287542|Q15034-2|HERC3', 'nc|ENSG00000138642|Q8IVU3-2|HERC6', 'ENSG00000138642|ENST00000264346|HERC6'] 109749 4798 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 23.583 2 0.10422555370801923 0.0018134715025906736 0.008620586715648875 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 79753 18501 PEALFQPSFL True H1975_Epitope_Rep3 1147.59136094387 1147.59026993586 77.59 2 0.10422527096058362 0.0018134715025906736 0.00862064177650582 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 52872 11668 KPFGQVIST True PC9_epitope_Rep3 975.5389314481899 975.53782993586 49.899 2 0.10422461776695342 0.0018134715025906736 0.008620768977540862 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 18852 12068 ELDPTNMTY True H1975_Epitope_Rep1 1082.45902644498 1082.45847496793 51.43 1 0.1042218371984 0.0018134715025906736 0.008621310477589766 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 47884 14812 IYIGGQEHF True PC9_epitope_Rep1 1062.5134449763398 1062.5123499358601 61.795 2 0.10421750529946223 0.0018134715025906736 0.008622154155624269 ['ENSG00000158125|ENST00000379416|XDH'] 141339 9179 YTDTYTEAY True H1975_Epitope_Rep1 1125.4502355830898 1125.44967496793 40.214 1 0.1042132915073182 0.0018134715025906736 0.00862297490738823 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 7661 6332 ASITALEAK True NCI_RA007_Epitope_Rep5 902.50729696674 902.50618993586 31.032 2 0.10420292757693912 0.0018134715025906736 0.008624993886987486 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 97990 3908 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 20.153 2 0.10418848643825224 0.0018134715025906736 0.008627807898214436 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 109025 19725 TAIDILTTV True PC9_epitope_Rep6 945.5382627418501 945.53716993586 88.53 2 0.10418640613096933 0.0018134715025906736 0.008628213341173622 ['ENSG00000198700|ENST00000361565|IPO9'] 106929 9264 SVDSHFQEV True PC9_epitope_Rep2 1046.4668887067398 1046.4657899358601 40.971 2 0.10417714087935107 0.0018134715025906736 0.008630019321348424 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 3938 15258 AHDDSVMYL True PC9_epitope_Rep5 1049.44879611445 1049.4476899358601 63.699 2 0.10417660682337042 0.0018134715025906736 0.008630123430459692 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 104855 6515 SRAPSVATV True PC9_epitope_Rep1 886.4872302285 886.48612993586 29.863 2 0.10415972824131543 0.0018134715025906736 0.008633414370761799 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 71818 14536 MEIDPSLGV True H1975_Epitope_Rep3 959.46338354943 959.46283496793 61.281 1 0.10415957296823199 0.0018134715025906736 0.008633444651085918 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 7969 13013 ATDDITELY True H1975_Epitope_Rep3 1039.47097102767 1039.47037496793 55.29 1 0.104154514153444 0.0018134715025906736 0.008634431243339527 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 28011 8646 FQNALLVR True H1975_Epitope_Rep3 959.5552502186699 959.55414993586 38.253 2 0.10415336429652441 0.0018134715025906736 0.008634655508593575 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 39097 5125 HHTTQQTFL True PC9_epitope_Rep6 1111.54105670651 1111.53994993586 27.404 2 0.10415104928339994 0.0018134715025906736 0.008635107040017895 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 97975 7058 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.4183249679301 32.113 1 0.10413478923229964 0.0018134715025906736 0.00863827911900549 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 64754 13236 LQADPSVSV True PC9_epitope_Rep2 914.47091145802 914.46980993586 56.189 2 0.104134618113935 0.0018134715025906736 0.008638312507447982 ['ENSG00000119686|ENST00000238667|FLVCR2'] 100173 10989 SITSVFITK True NCI_RA007_Epitope_Rep4 994.5698972233 994.56880993586 49.137 2 0.10413335928298807 0.0018134715025906736 0.008638558133083278 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 72276 21088 MHYPTALLF True PC9_epitope_Rep5 1091.54738795691 1091.5462899358602 86.178 2 0.10411590321742123 0.0018134715025906736 0.008641964887792505 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 88024 12495 QRPPTIVL True PC9_epitope_Rep4 922.5600012459399 922.55890993586 55.872 2 0.10410682203204823 0.0018134715025906736 0.0086437376975275 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 105187 12242 SRGFPLRL True PC9_epitope_Rep4 944.5555845718399 944.55448993586 54.906 2 0.1041023245714098 0.0018134715025906736 0.008644615811649776 ['ENST00000535126.1_1_11:64084857-64084977:-|nuORF', 'nc|ENSG00000173113|Q9UI30-2|TRMT112', 'ENSG00000173113|ENST00000544844|TRMT112'] 6886 17505 AQIEDLQVKL True PC9_epitope_Rep4 1155.6499384491499 1155.6488499358602 75.337 2 0.10410086541586487 0.0018134715025906736 0.008644900725300214 ['ENSG00000157933|ENST00000378536|SKI'] 120171 4240 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 21.421 2 0.10409570905496181 0.0018134715025906736 0.008645907624873128 ['ENSG00000155506|ENST00000518297|LARP1'] 134361 6985 VYPERSTSY True PC9_epitope_Rep1 1100.51383889916 1100.51274993586 31.673 2 0.10408583816880884 0.0018134715025906736 0.008647835459709466 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 40139 12773 HQADIGEYV True PC9_epitope_Rep3 1030.47197408718 1030.47086993586 54.152 2 0.10407820463728135 0.0018134715025906736 0.008649326610933539 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 6953 8374 AQITGTEHL True PC9_epitope_Rep5 968.49270953176 968.49160993586 37.153 2 0.1040773271848792 0.0018134715025906736 0.008649498030292892 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 24227 5270 EYSKQMQRF True PC9_epitope_Rep2 1215.57064258263 1215.56899490379 25.658 3 0.10407170781740266 0.0018134715025906736 0.008650595908983398 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 54414 16325 KYFLKPEVL True PC9_epitope_Rep5 1135.6641319613097 1135.66249490379 67.79 3 0.10406550308928372 0.0018134715025906736 0.008651808307533426 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 98069 8477 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48036993586 37.592 2 0.10406443924610781 0.0018134715025906736 0.008652016197975272 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 121808 16732 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 69.498 2 0.10405362671383377 0.0018134715025906736 0.008654129396521269 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 30321 6866 GAAKDLPGV True PC9_epitope_Rep6 826.4548674710599 826.45376993586 35.292 2 0.10405338224206077 0.0018134715025906736 0.008654177181755658 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 26370 8392 FHTTPNTSL True PC9_epitope_Rep2 1016.49270953176 1016.49160993586 37.652 2 0.10404624014340119 0.0018134715025906736 0.0086555733111067 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 8302 22491 ATIIQLFQV True PC9_epitope_Rep4 1031.6015317047497 1031.6004299358601 94.743 2 0.10403906428178276 0.0018316783958353417 0.0086569762583763 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 76915 17887 NRDPILVSL True PC9_epitope_Rep2 1025.58694426977 1025.58584993586 74.105 2 0.10403251066798178 0.0018316783958353417 0.00865825774136283 ['ENSG00000106789|ENST00000375077|CORO2A'] 13118 18502 DLQSNLLQV True PC9_epitope_Rep2 1028.5502244078798 1028.54912993586 76.504 2 0.10403141215549808 0.0018316783958353417 0.008658472560545388 ['ENSG00000131067|ENST00000336431|GGT7', 'GGT7|p.P598R|1|0.26|ENSG00000131067|chr20:34849993-34849993|G/C|missense_variant'] 11775 10131 DHDITSQL True PC9_epitope_Rep4 927.42977492203 927.42866993586 46.644 2 0.10403140521937584 0.0018316783958353417 0.008658473916952356 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 18878 7784 ELDSNLYR True NCI_RA007_Epitope_Rep1 1008.48762415132 1008.48652993586 34.268 2 0.10403019690325588 0.0018316783958353417 0.008658710214693199 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 117194 13441 TVLGSLQKV True PC9_epitope_Rep2 943.57023157647 943.56912993586 56.981 2 0.10402674582450606 0.0018316783958353417 0.008659385140180668 ['ENSG00000176092|ENST00000308182|CRYBG2', 'ENST00000520372.5_1_1:26655223-26662846:-|nuORF'] 32763 10211 GHDASQITL True PC9_epitope_Rep3 940.46140940348 940.46030993586 44.228 2 0.10402667648605526 0.0018316783958353417 0.008659398701179684 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 29788 16910 FVPIKVEQI True PC9_epitope_Rep4 1071.63283183303 1071.6317299358602 73.03 2 0.10402348608245736 0.0018316783958353417 0.008660022692486849 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 137606 5501 YEEVHDLER True NCI_RA007_Epitope_Rep2 1188.54111627616 1188.53947490379 26.016 3 0.1040213572697919 0.0018316783958353417 0.008660439077823429 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF', 'nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4'] 53154 16113 KQADPFASL True PC9_epitope_Rep1 975.5025459394699 975.50144993586 66.795 2 0.1040209240957307 0.0018316783958353417 0.00866052380690494 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 49319 5290 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 25.428 2 0.10401946847725108 0.0018316783958353417 0.008660808532505497 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 69893 8352 LVIITAGAR True H1975_Epitope_Rep3 912.5756513100799 912.57454993586 37.11 2 0.10401703835097631 0.0018316783958353417 0.008661283896310714 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 85728 13021 QHAVEAISL True PC9_epitope_Rep5 966.5134449763399 966.51234993586 55.09 2 0.10401402804266659 0.0018316783958353417 0.008661872785913589 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 104511 20748 SQNDGFFAV True PC9_epitope_Rep1 983.4348603024699 983.43431496793 84.634 1 0.10400391574029216 0.0018316783958353417 0.008663851280199392 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 35732 9940 GTGIVSAPVPK True PC9_epitope_Rep1 1024.59169529704 1024.5905899358602 43.096 2 0.10399504470849094 0.0018316783958353417 0.008665587274721734 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 9727 20920 AYGNVFSAF True PC9_epitope_Rep4 974.4497820906199 974.44868993586 88.628 2 0.10399471116624796 0.0018316783958353417 0.00866565255296162 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 97444 13467 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 56.917 1 0.1039933072925273 0.0018316783958353417 0.008665927313161164 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 107081 13400 SVHGDFLNV True PC9_epitope_Rep6 986.48214484806 986.48104993586 63.216 2 0.10398539000715129 0.0018316783958353417 0.008667477007349876 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 120173 4473 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 22.318 2 0.10395799224335846 0.0018316783958353417 0.008672841779071435 ['ENSG00000155506|ENST00000518297|LARP1'] 44107 4465 IINSSITTK True NCI_RA007_Epitope_Rep3 975.5600608155901 975.55896993586 24.38 2 0.1039548123334742 0.0018316783958353417 0.008673464645647607 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 98945 6363 SHANSAVVL True PC9_epitope_Rep2 896.47158016436 896.47048993586 29.878 2 0.10395315494984832 0.0018316783958353417 0.008673789303605144 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 117688 20969 TVTTVILEV True PC9_epitope_Rep2 973.5695628701299 973.56846993586 86.107 2 0.1039523758878888 0.0018316783958353417 0.008673941914833503 ['ENSG00000119203|ENST00000238112|CPSF3'] 115153 17871 TRDGNVFLVP True PC9_epitope_Rep5 1116.5927579262 1116.5916699358602 73.759 2 0.10394510769554628 0.0018316783958353417 0.008675365812640303 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 99141 14146 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 59.496 2 0.10394407802492514 0.0018316783958353417 0.00867556755162499 ['ENSG00000132646|ENST00000379143|PCNA'] 42835 6451 IEQETPVSA True H1975_Epitope_Rep2 972.4763907612798 972.47584496793 29.731 1 0.10393867329140219 0.0018316783958353417 0.00867662655200282 ['ENST00000395449.7_1_11:47187835-47198404:-|nuORF', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 9858 13153 AYLHTTTTF True PC9_epitope_Rep1 1053.51311062317 1053.51257496793 55.458 1 0.1039348480362431 0.0018316783958353417 0.008677376145361852 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 97695 5986 SEIDM[Oxidation]SVKA True H1975_Epitope_Rep1 994.46411220586 994.46300993586 28.096 2 0.10393051954201117 0.0018316783958353417 0.008678224428011605 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 108774 12756 SYSSTFHSL True PC9_epitope_Rep1 1027.46107505031 1027.45996993586 53.94 2 0.10392446696889958 0.0018316783958353417 0.008679410723013287 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 38493 9230 HEQLTVAEI True H1975_Epitope_Rep2 1038.53457434374 1038.53346993586 40.458 2 0.10392311113714627 0.0018316783958353417 0.008679676485307751 ['ENSG00000167553|ENST00000301072|TUBA1C'] 60944 21962 LIDEQILCV True PC9_epitope_Rep5 1044.5525329069999 1044.5514299358601 89.512 2 0.10391946990827469 0.0018316783958353417 0.008680390256617047 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 1830 8668 AEIDAHLVA True H1975_Epitope_Rep2 937.48689587533 937.48578993586 38.301 2 0.10391783027572928 0.0018316783958353417 0.008680711683740875 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 102888 8157 SPALLREA True PC9_epitope_Rep4 855.48141657207 855.48030993586 38.83 2 0.10391670301668647 0.0018316783958353417 0.008680932673809644 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000572418.1_1_17:3801110-3806945:-|nuORF'] 111042 18607 THDGGFLSL True PC9_epitope_Rep1 945.45559574705 945.45448993586 76.359 2 0.10391375471933123 0.0018316783958353417 0.008681510689350655 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 76544 19255 NQITQLESL True PC9_epitope_Rep4 1044.54513902744 1044.54457496793 82.168 1 0.1039079395084046 0.0018316783958353417 0.008682650873492669 ['ENST00000496302.1_1_10:95278654-95279576:+|nuORF', 'ENSG00000138180|ENST00000371485|CEP55'] 1019 10678 AEAEAWYQT True H1975_Epitope_Rep2 1067.45598966987 1067.4548899358601 46.096 2 0.10390780460076283 0.0018316783958353417 0.008682677326442649 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 117044 21617 TVIATNILL True PC9_epitope_Rep5 956.59063266788 956.58952993586 88.19 2 0.1038934022459401 0.0018316783958353417 0.008685501813330594 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 39881 8222 HPDYNNEL True PC9_epitope_Rep3 1000.4250238947601 1000.42392993586 36.604 2 0.10389288727591565 0.0018316783958353417 0.008685602821916353 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 138412 11968 YHHGYSYIL True PC9_epitope_Rep2 1151.53999407735 1151.5383449037902 51.355 3 0.10388781851524281 0.0018316783958353417 0.008686597092143141 ['ENSG00000134531|ENST00000256951|EMP1'] 38859 4368 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 23.893 2 0.10388592197861823 0.0018316783958353417 0.008686969138194785 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 88130 16997 QRSDIATLL True PC9_epitope_Rep3 1015.56620882519 1015.56510993586 70.538 2 0.10388091720693776 0.0018316783958353417 0.008687951004262527 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15', 'ENST00000546718.5_1_12:62654195-62688116:+|nuORF', 'ENST00000551206.5_1_12:62654195-62696719:+|nuORF', 'ENST00000537297.2_1_12:62654195-62698555:+|nuORF', 'ENST00000548524.5_1_12:62654195-62708744:+|nuORF', 'ENST00000550632.5_1_12:62654195-62749153:+|nuORF', 'nc|ENSG00000135655|Q9Y4E8-4|USP15'] 6527 5689 APTGDLPRA True PC9_epitope_Rep6 896.4715801643599 896.47048993586 30.004 2 0.10387903161388203 0.0018316783958353417 0.008688320958849019 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 75431 13491 NIVPVIAKA True PC9_epitope_Rep5 923.5804023373499 923.57930993586 56.912 2 0.10387643600355219 0.0018316783958353417 0.008688830244045606 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 71212 21042 LYPEGLAQL True PC9_epitope_Rep1 1002.5385970950199 1002.53750993586 85.768 2 0.10387569048723089 0.0018316783958353417 0.008688976527246947 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 68079 12931 LTDLVPNTEY True H1975_Epitope_Rep3 1163.57101942211 1163.5704749679298 54.967 1 0.10387121753768519 0.0018316783958353417 0.008689854247028606 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 1850 11800 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 50.382 1 0.1038694215347496 0.0018316783958353417 0.008690206697799387 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 6803 10713 AQEPGNYEV True PC9_epitope_Rep5 1005.4403396057298 1005.43924993586 46.198 2 0.10386862778902366 0.0018316783958353417 0.008690362468231093 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 90802 5364 RESPFSTSA True H1975_Epitope_Rep2 980.45632402304 980.45522993586 25.676 2 0.10386790364205162 0.0018316783958353417 0.008690504582437503 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 6151 10117 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 46.588 2 0.10386510719357343 0.0018316783958353417 0.008691053407814382 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 47603 10295 IVVVTAGVR True PC9_epitope_Rep5 912.5756513100798 912.57454993586 44.587 2 0.10386423273381026 0.0018316783958353417 0.008691225034370446 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 98059 8327 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 36.98 1 0.10385275186488617 0.0018316783958353417 0.008693478638482695 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 115059 7827 TRDEDHIAL True PC9_epitope_Rep1 1068.51998690876 1068.5188899358602 34.933 2 0.10384748117755169 0.0018316783958353417 0.008694513420902232 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 48054 23048 IYLTFPVAM True PC9_epitope_Rep2 1053.55689001145 1053.55578993586 94.146 2 0.10383970065014869 0.0018316783958353417 0.008696041170968427 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 88564 12597 QTDINLPY True H1975_Epitope_Rep2 962.4709114580198 962.4703649679301 53.552 1 0.10383540075391383 0.0018316783958353417 0.008696885590289685 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 72038 18350 M[Oxidation]ETVWTILP True H1975_Epitope_Rep1 1104.55253328744 1104.55197496793 76.474 1 0.1038331658747198 0.0018316783958353417 0.008697324509940197 ['ENSG00000198712|ENST00000361739|MT-CO2'] 60545 14622 LHDSSDYLL True PC9_epitope_Rep2 1061.50293986229 1061.50184993586 61.512 2 0.10382692019649406 0.0018316783958353417 0.00869855124430287 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000482825.7_1_1:150939531-150940017:-|nuORF', 'ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF', 'SPEN-CERS4|1|fusion', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF'] 95849 18432 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.62577490379 75.689 3 0.1038165163688584 0.0018316783958353417 0.008700595063666373 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 134568 20404 VYSEVAAYEF True PC9_epitope_Rep2 1176.5339056373998 1176.53280993586 83.909 2 0.1038159793785087 0.0018316783958353417 0.00870070056729153 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 40550 11588 HRFPTVAV True PC9_epitope_Rep5 925.5133854066898 925.5122899358599 49.57 2 0.10381514783805969 0.0018316783958353417 0.008700863944220445 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 85843 4686 QHEGGVQEL True PC9_epitope_Rep6 995.46722305991 995.46612993586 25.394 2 0.10381130800858747 0.0018316783958353417 0.008701618413033744 ['ENSG00000090273|ENST00000321265|NUDC'] 63447 17938 LLVTKNWL True PC9_epitope_Rep2 985.5960524014899 985.59494993586 74.303 2 0.10381015602940517 0.0018316783958353417 0.00870184477189545 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.Q2131L|1|0.19|ENSG00000179869|chr7:48276058-48276058|A/T|missense_variant'] 96735 10917 SALSGHLETV True PC9_epitope_Rep2 1012.5189242796 1012.51782993586 47.315 2 0.10380794647750279 0.0018316783958353417 0.008702278954994015 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 141466 15745 YTGTPDWLY True H1975_Epitope_Rep2 1114.4971262058598 1114.4960299358602 65.734 2 0.10380689995682196 0.0018316783958353417 0.008702484606483745 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 131578 18963 VTLGPVPEI True PC9_epitope_Rep6 923.53278343859 923.53168993586 85.586 2 0.10378218212493354 0.0018316783958353417 0.008707343258476333 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 103264 12506 SPLLLQAKA True PC9_epitope_Rep1 939.5753169569099 939.57420993586 52.973 2 0.10378013954466614 0.0018316783958353417 0.008707744874105066 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 139021 6505 YLAEVAAGDDK True H1975_Epitope_Rep3 1150.5506183306998 1150.5495299358602 29.991 2 0.10377923160583488 0.0018316783958353417 0.008707923400305545 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF'] 70872 22493 LYEEAFTVF True PC9_epitope_Rep2 1117.53317736141 1117.53208993586 92.009 2 0.10377027386249979 0.0018316783958353417 0.00870968493199005 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 84308 7265 PYSDSTAKL True PC9_epitope_Rep5 980.48147614172 980.48036993586 32.909 2 0.10376642672257189 0.0018316783958353417 0.008710441573466421 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF'] 2866 12416 AEVFPPPVA True H1975_Epitope_Rep2 925.4909186266098 925.48982993586 52.843 2 0.1037610067259624 0.0018316783958353417 0.008711507665820246 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 85868 17887 QHFDSVMQL True PC9_epitope_Rep3 1103.5069796969099 1103.50588993586 74.004 2 0.10375908798965394 0.0018316783958353417 0.008711885103866602 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 88800 6575 QTVAVGVIK True NCI_RA007_Epitope_Rep5 913.5596668927699 913.55856993586 31.952 2 0.10374257792738376 0.0018316783958353417 0.008715133476932917 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 99333 8831 SHSSFQASL True PC9_epitope_Rep2 962.44575933934 962.44466993586 39.32 2 0.10373063570966985 0.0018316783958353417 0.008717483846686335 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 45605 21185 IQYIPTELDQV True PC9_epitope_Rep2 1317.68163250025 1317.68052993586 86.943 2 0.10372341426076352 0.0018316783958353417 0.008718905408701627 ['ENSG00000149100|ENST00000531120|EIF3M'] 31385 15045 GDSVIVVLR True PC9_epitope_Rep5 956.5654805492 956.56438993586 62.874 2 0.10372232215641597 0.0018316783958353417 0.008719120411820755 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 132529 10930 VVDPNDPQM True PC9_epitope_Rep5 1013.44879611445 1013.44768993586 47.032 2 0.1037200927435456 0.0018316783958353417 0.008719559333238033 ['ENSG00000151883|ENST00000281631|PARP8'] 74149 8860 NEDLRSWTA True H1975_Epitope_Rep1 1090.50433684462 1090.5032299358602 38.996 2 0.10371733453032593 0.0018316783958353417 0.008720102392964202 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 76684 21489 NQSELAVLL True PC9_epitope_Rep3 985.5444107514498 985.5438649679301 87.949 1 0.10371606784576885 0.0018316783958353417 0.008720351799134461 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 64502 8063 LPQSFQVDTSK True H1975_Epitope_Rep1 1248.6350166609998 1248.6339099358602 35.957 2 0.10371492832055161 0.0018316783958353417 0.008720576173889282 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 77736 5713 NTNPNFVR True PC9_epitope_Rep3 960.4777281739599 960.47662993586 27.048 2 0.10369799881031792 0.0018316783958353417 0.008723910281026136 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 30046 8530 FYGRHAEL True PC9_epitope_Rep5 991.4875645816699 991.48646993586 37.753 2 0.10369591758659123 0.0018316783958353417 0.008724320242891445 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 60062 12059 LGLGIDEDD True H1975_Epitope_Rep3 945.42910621569 945.42855496793 51.547 1 0.10368924994351235 0.0018316783958353417 0.008725633767584194 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000530115.1_1_11:27910388-27910514:-|nuORF'] 65394 12538 LREGDPVSL True PC9_epitope_Rep3 984.52400966004 984.52290993586 53.25 2 0.10367890058056482 0.0018316783958353417 0.008727672966825898 ['ENSG00000141499|ENST00000396463|WRAP53'] 33594 18047 GLFIIDGK True PC9_epitope_Rep2 861.4960040070499 861.49490993586 74.722 2 0.10367873477644754 0.0018316783958353417 0.008727705639966065 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF'] 6766 10472 AQDEPAESL True PC9_epitope_Rep5 958.4243551884199 958.42324993586 45.266 2 0.10367766521579895 0.0018316783958353417 0.008727916408997206 ['nc|ENSG00000141582|O00257-3|CBX4', 'ENSG00000141582|ENST00000269397|CBX4'] 100188 23779 SIVDFLITA True PC9_epitope_Rep1 977.5433481222899 977.54224993586 96.261 2 0.10367247447969712 0.0018316783958353417 0.008728939371740326 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 40059 9742 HPTWALKEA True PC9_epitope_Rep1 1051.5450794577898 1051.54398993586 42.332 2 0.10367059208264576 0.0018316783958353417 0.008729310373023965 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 98612 3886 SFTTTAER True NCI_RA007_Epitope_Rep4 911.4348603024699 911.43376993586 21.162 2 0.10366187537618367 0.0018316783958353417 0.008731028544548568 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF'] 24889 16614 FAYEGPMYL True H1975_Epitope_Rep1 1089.4841189940098 1089.48357496793 69.283 1 0.1036538760623634 0.0018316783958353417 0.008732605594880734 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 115411 19489 TRLPEFSEL True PC9_epitope_Rep3 1090.56587447202 1090.56476993586 80.196 2 0.10365373649266658 0.0018316783958353417 0.00873263311322397 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 71716 9579 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42717496793 41.771 1 0.10365328020436121 0.0018316783958353417 0.008732723078163475 ['ENSG00000026025|ENST00000544301|VIM'] 92087 10599 RKVYSILSL True NCI_RA007_Epitope_Rep5 1077.65462990677 1077.6535299358602 47.405 2 0.10365225138036858 0.0018316783958353417 0.00873292593144232 ['ENSG00000155957|ENST00000358230|TMBIM4'] 105298 11879 SRMDGEGQLTL True PC9_epitope_Rep6 1205.5710365054497 1205.56992993586 56.916 2 0.10364888429071684 0.0018316783958353417 0.008733589852327025 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant'] 29554 22965 FVIDGFDEL True PC9_epitope_Rep1 1053.50187723313 1053.5007899358602 93.134 2 0.10363460014170671 0.0018316783958353417 0.008736406932123863 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 101803 13552 SLPEELNRV True PC9_epitope_Rep2 1055.56112344475 1055.56002993586 57.42 2 0.10363090649998885 0.0018316783958353417 0.008737135523797396 ['ENSG00000137815|ENST00000389629|RTF1'] 60526 11348 LHDINAQL True PC9_epitope_Rep1 922.4872302285 922.48612993586 48.528 2 0.10363044598553088 0.0018316783958353417 0.008737226366964978 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 130121 13546 VSDPVGVLY True H1975_Epitope_Rep2 947.49639792987 947.49530993586 57.241 2 0.10362933272300272 0.0018316783958353417 0.008737445977920704 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 45051 20020 IPHLLGDVV True PC9_epitope_Rep3 961.55966689277 961.55856993586 82.255 2 0.10362863825066201 0.0018316783958353417 0.008737582977703016 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 26444 18551 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.4596499358602 76.575 2 0.10362336342188498 0.0018316783958353417 0.00873862361982531 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 104749 13648 SQVPEVTTV True PC9_epitope_Rep2 958.49712620586 958.4965749679301 57.789 1 0.10362059451517469 0.0018316783958353417 0.008739169929933918 ['ENSG00000196455|ENST00000356763|PIK3R4'] 21340 18156 ERFLSQVL True PC9_epitope_Rep2 990.5498304850599 990.54872993586 75.141 2 0.10361545643392857 0.0018316783958353417 0.0087401837692168 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1'] 28199 14827 FREDSVVL True PC9_epitope_Rep3 963.5025459394699 963.50144993586 62.168 2 0.1036153075435566 0.0018316783958353417 0.008740213149749019 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.L649Wfs*7|1|0.08|ENSG00000106608|chr7:43877517-43877517|A/-|frameshift_variant'] 38865 6453 HHDSHSSVIL True PC9_epitope_Rep3 1130.5468703629401 1130.54521490379 29.847 3 0.10361140263811991 0.0018316783958353417 0.00874098373848139 ['ENSG00000129315|ENST00000261900|CCNT1'] 86085 9160 QHSTAQLNL True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 40.174 2 0.10360713182380571 0.0018316783958353417 0.008741826609889956 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 112178 10857 TKEVNSGFFY True H1975_Epitope_Rep2 1190.5607890915799 1190.56027496793 46.79 1 0.10360291535745139 0.0018316783958353417 0.00874265883197721 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 70946 14764 LYGKIAEAF True PC9_epitope_Rep6 1010.5436824754598 1010.54258993586 68.742 2 0.10359423718736238 0.0018316783958353417 0.008744371919202115 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 23939 17652 EYLKVDAQF True PC9_epitope_Rep1 1111.5549754351498 1111.5538699358601 72.691 2 0.10358826432589358 0.0018316783958353417 0.008745551160688338 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF', 'ENST00000466052.1_1_1:33256818-33263474:-|nuORF', 'ENST00000470377.1_1_1:33256708-33272178:-|nuORF'] 134447 12793 VYPPPHQVF True PC9_epitope_Rep1 1082.5549158654999 1082.55380993586 54.083 2 0.10358744631936319 0.0018316783958353417 0.008745712674272432 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 35067 9319 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 40.798 2 0.10358626244152075 0.0018316783958353417 0.008745946433413344 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 134377 16575 VYPESFREL True PC9_epitope_Rep5 1138.56587447202 1138.56476993586 68.76 2 0.10358332592053297 0.0018316783958353417 0.008746526281490379 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 34564 4264 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 22.973 2 0.10357703622069027 0.0018316783958353417 0.008747768375526164 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 108811 4691 SYTSHTNEI True NCI_RA007_Epitope_Rep5 1050.4618033263002 1050.4607099358602 24.731 2 0.10357271696513261 0.0018316783958353417 0.008748621443053323 ['ENSG00000112936|ENST00000313164|C7'] 26295 14554 FHGPPEPVL True PC9_epitope_Rep2 991.5127167003499 991.51160993586 61.253 2 0.10356086991164865 0.0018316783958353417 0.008750961686190604 ['ENSG00000101310|ENST00000650089|SEC23B'] 98981 19610 SHDEVFVVL True PC9_epitope_Rep2 1043.52876068731 1043.52766993586 80.814 2 0.10356059674232593 0.0018316783958353417 0.00875101565460076 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 7211 9450 ARADSYYEY True PC9_epitope_Rep2 1136.47745339044 1136.47634993586 41.688 2 0.10355714236028278 0.0018316783958353417 0.008751698143539792 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000480100.3_1_9:140000303-140000768:+|nuORF', 'ENST00000535028.5_1_9:140000303-140001810:+|nuORF'] 64096 22319 LPDIFEAQIA True PC9_epitope_Rep5 1115.58627556343 1115.5851699358602 90.858 2 0.10355631202726782 0.0018316783958353417 0.00875186220165978 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 73233 14428 MSDSYLPSYY True H1975_Epitope_Rep2 1224.5008912569601 1224.50037496793 60.65 1 0.1035558028981862 0.0018316783958353417 0.008751962797410447 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 11877 16805 DHIHIIAL True PC9_epitope_Rep5 930.52870111766 930.52760993586 69.648 2 0.10354958042775773 0.0018316783958353417 0.008753192347619485 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 85882 16045 QHFDTIYSI True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 74.042 2 0.1035486984012269 0.0018316783958353417 0.008753366648076513 ['ENSG00000010292|ENST00000315579|NCAPD2'] 15037 12083 DYMKTTSNF True PC9_epitope_Rep2 1105.47501086229 1105.47390993586 51.787 2 0.10353688384000537 0.0018316783958353417 0.008755701687704894 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 87297 11769 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.51287496793 50.142 1 0.10352684934941894 0.0018316783958353417 0.0087576853825252 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 121379 6337 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 29.308 2 0.10352333338967742 0.0018316783958353417 0.008758380546440457 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 3273 5495 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 26.531 2 0.10352034805473372 0.0018316783958353417 0.008758970838580371 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 42468 6775 IEEDKWRVA True H1975_Epitope_Rep2 1144.5876725457601 1144.58602490379 30.975 3 0.10351908051312099 0.0018316783958353417 0.008759221481929376 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'STARD4|p.K33M|1|0.13|ENSG00000164211|chr5:111507336-111507336|T/A|missense_variant', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'ENSG00000164211|ENST00000296632|STARD4'] 32881 10649 GHSGDVMSL True PC9_epitope_Rep5 901.3963666187701 901.39526993586 45.949 2 0.10351578709114709 0.0018316783958353417 0.008759872754535526 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 21231 8983 ERDPRSLTL True PC9_epitope_Rep2 1085.5829215184901 1085.58182993586 39.907 2 0.10351287676271113 0.0018316783958353417 0.008760448309286 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 103526 15187 SPRPPLISV True PC9_epitope_Rep3 964.57056592964 964.56946993586 63.562 2 0.10351174285503999 0.0018316783958353417 0.008760672563893082 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 47935 12037 IYIKQIKTF True PC9_epitope_Rep4 1152.6906810623198 1152.6890249037901 54.105 3 0.10350931610938091 0.0018316783958353417 0.008761152523518438 ['ENSG00000103479|ENST00000262133|RBL2'] 99744 21611 SIIGRLLEV True PC9_epitope_Rep3 998.6124307416198 998.61132993586 88.423 2 0.10350730472611025 0.0018316783958353417 0.00876155035227523 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 104860 5204 SRAPSVATV True PC9_epitope_Rep4 886.4872302285 886.48612993586 26.718 2 0.10350561246778678 0.0018316783958353417 0.008761885075182173 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 57759 11022 LEEPLTQVA True H1975_Epitope_Rep1 998.52842633414 998.5278749679301 47.357 1 0.10350383163295351 0.0018316783958353417 0.008762237331481963 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 90882 5354 REVQGFESA True NCI_RA007_Epitope_Rep4 1021.4828731240499 1021.48176993586 27.162 2 0.10350163443677626 0.0018316783958353417 0.008762671964474507 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 99402 14616 SHVIQDIAL True PC9_epitope_Rep4 994.5447451046199 994.54364993586 64.151 2 0.10349982761468778 0.0018316783958353417 0.00876302939208452 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 6878 19018 AQIDHYLGL True PC9_epitope_Rep5 1028.52909504048 1028.52857496793 78.178 1 0.10349850427956502 0.0018316783958353417 0.008763291184633561 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 40325 12646 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5445349679301 53.951 1 0.10349235651946904 0.0018316783958353417 0.008764507481331238 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 103238 9225 SPLFSQHTA True PC9_epitope_Rep5 986.48214484806 986.48104993586 40.431 2 0.10349068970225685 0.0018316783958353417 0.008764837278848612 ['ENSG00000167721|ENST00000301364|TSR1'] 132473 10029 VVDGAFKEV True PC9_epitope_Rep4 962.50729696674 962.50618993586 46.24 2 0.10347652889504873 0.0018316783958353417 0.008767639625976856 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 28556 11644 FSEQVAMGY True H1975_Epitope_Rep3 1030.4429824580197 1030.44247496793 49.923 1 0.10347621636600682 0.0018316783958353417 0.008767701483487147 ['ENSG00000179051|ENST00000375436|RCC2'] 98279 14117 SEVILPVPA True H1975_Epitope_Rep2 923.53278343859 923.5322349679301 59.455 1 0.10347152594295 0.0018316783958353417 0.008768629888814813 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 96106 10923 RYMPQNPHII True PC9_epitope_Rep2 1267.6495616096697 1267.64846993586 47.337 2 0.1034536347499586 0.0018316783958353417 0.008772172073624733 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 141924 12765 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.5851099358601 54.161 2 0.1034488451699415 0.0018316783958353417 0.008773120570963583 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 130093 13969 VSDMVEDLY True H1975_Epitope_Rep2 1069.4637774722498 1069.46268993586 58.879 2 0.10344608201969933 0.0018316783958353417 0.00877366781210129 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 32083 7463 GESPVDYDGGR True PC9_epitope_Rep1 1150.4890807032998 1150.48798993586 33.523 2 0.10344128524571437 0.0018316783958353417 0.008774617889705965 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 110956 16204 THADYVLEM True PC9_epitope_Rep5 1077.48009624273 1077.47898993586 67.319 2 0.10342812297429385 0.0018316783958353417 0.008777225395054187 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 44333 20451 ILDPHVVLL True PC9_epitope_Rep2 1017.6222671493299 1017.6211699358599 84.093 2 0.1034222643945655 0.0018316783958353417 0.008778386245426786 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 49945 15776 KILPTLEAV True PC9_epitope_Rep6 982.60628273202 982.60518993586 72.929 2 0.10341517237128947 0.0018316783958353417 0.008779791694177379 ['ENSG00000143621|ENST00000361891|ILF2'] 22265 8231 ETDAQSITY True H1975_Epitope_Rep1 1026.4505699362599 1026.4499749679298 36.605 1 0.10341279549216813 0.0018316783958353417 0.008780262776196925 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 76289 7268 NPNQYHYVA True PC9_epitope_Rep1 1104.49885754136 1104.49776993586 32.769 2 0.10340980224564886 0.0018316783958353417 0.008780856052765539 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A'] 77161 7382 NRPSVQAAL True PC9_epitope_Rep4 954.5246783663799 954.52358993586 35.735 2 0.10340924176971059 0.0018316783958353417 0.008780967146204376 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 86629 15687 QLEWDDSTLSY True H1975_Epitope_Rep1 1355.58812603823 1355.58702993586 65.629 2 0.10340735739878192 0.0018316783958353417 0.008781340662317146 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 23749 14911 EYGKFFVTL True NCI_RA007_Epitope_Rep4 1102.5698972233 1102.5688099358601 64.818 2 0.10340447356429043 0.0018316783958353417 0.008781912319574904 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 62955 15748 LLPGKTYSF True PC9_epitope_Rep3 1024.5593325395998 1024.55822993586 65.731 2 0.10340361109516366 0.0018316783958353417 0.008782083292200673 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 88764 13972 QTPQRLLEV True PC9_epitope_Rep1 1082.6084079903399 1082.60730993586 58.581 2 0.10339921675303206 0.0018316783958353417 0.008782954459639227 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 132221 15938 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 69.231 2 0.10338804864311968 0.0018316783958353417 0.0087851688832302 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 7272 12807 ARDFTVSAM True PC9_epitope_Rep1 996.4698659121999 996.46876993586 54.136 2 0.10338761324021661 0.0018316783958353417 0.00878525522619472 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'EIF4A1|p.H293D|1|0.08|ENSG00000161960|chr17:7577677-7577677|C/G|missense_variant'] 28965 17345 FTDVNKIYL True PC9_epitope_Rep2 1111.5913609438699 1111.59026993586 71.971 2 0.10338746948897792 0.0018316783958353417 0.008785283733092404 ['ENSG00000101337|ENST00000398022|TM9SF4'] 27229 22112 FLPDPSALQNL True PC9_epitope_Rep1 1213.6342883850098 1213.6331899358602 89.867 2 0.10338162128402809 0.0018316783958353417 0.00878644354923433 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 1897 6211 AEIFHSADA True H1975_Epitope_Rep2 959.4348603024699 959.43376993586 28.86 2 0.10337641773949675 0.0018316783958353417 0.008787475639919776 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 121872 13732 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 64.608 2 0.1033728786936373 0.0018316783958353417 0.008788177654160963 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 58907 11595 LETEVPVVA True H1975_Epitope_Rep3 955.5226126777098 955.5220649679301 49.731 1 0.10336971651700147 0.0018316783958353417 0.008788804957209729 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 45827 8480 ISDGKMQLY True H1975_Epitope_Rep3 1053.51648175145 1053.5153899358602 37.603 2 0.10336260291844289 0.0018316783958353417 0.008790216288566601 ['ZNF607|p.K428Rfs*97|1|0.38|ENSG00000198182|chr19:37698850-37698850|C/-|frameshift_variant', 'nc|ENSG00000198182|Q96SK3-3|ZNF607', 'ENSG00000198182|ENST00000355202|ZNF607'] 132603 19826 VVFEIQGTTV True PC9_epitope_Rep4 1091.58627556343 1091.5851699358602 84.389 2 0.10336073592104109 0.0018316783958353417 0.008790586735171795 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 134365 6896 VYPERSTSY True PC9_epitope_Rep3 1100.51383889916 1100.51274993586 31.54 2 0.10335660938472752 0.0018316783958353417 0.008791405569018657 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 127315 14451 VMEQITLAY True H1975_Epitope_Rep2 1066.53688284286 1066.53578993586 60.741 2 0.10335604645808495 0.0018316783958353417 0.008791517276944915 ['ENSG00000143570|ENST00000356205|SLC39A1', 'nc|ENSG00000143570|Q9NY26-2|SLC39A1'] 96327 7872 RYSSMAASF True NCI_RA007_Epitope_Rep3 1018.4542158480599 1018.45310993586 38.083 2 0.10335526416063319 0.0018316783958353417 0.008791672519375215 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 106636 5250 STSNSFNLK True NCI_RA007_Epitope_Rep3 996.48762415132 996.48652993586 27.653 2 0.10335340464701277 0.0018316783958353417 0.008792041539723945 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 87772 10022 QRDETALQL True PC9_epitope_Rep6 1072.5512870370399 1072.55018993586 49.119 2 0.10335140276071546 0.0018316783958353417 0.008792438830545455 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 104025 16527 SQDLVYETV True PC9_epitope_Rep4 1052.50260550912 1052.5015099358602 71.543 2 0.10333789957521222 0.0018316783958353417 0.008795119099243754 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 114791 18307 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 75.745 2 0.10333414120509597 0.0018316783958353417 0.008795865243646157 ['ENSG00000119616|ENST00000341162|FCF1'] 140263 16651 YRAPELML True PC9_epitope_Rep4 991.5160878286299 991.51498993586 72.012 2 0.10333150896876306 0.0018316783958353417 0.008796387854343073 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 12046 7486 DHSQAVTL True PC9_epitope_Rep2 869.42429561877 869.42318993586 34.166 2 0.10332700662047566 0.0018316783958353417 0.008797281830797678 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 26917 21069 FLDGNEMTL True PC9_epitope_Rep5 1038.46919720586 1038.46867496793 86.102 1 0.10332686841197197 0.0018316783958353417 0.008797309274556724 ['ENSG00000169504|ENST00000374379|CLIC4'] 35340 8406 GRSDTQLVV True PC9_epitope_Rep2 973.5192586327698 973.51816993586 37.705 2 0.10330997526629529 0.0018316783958353417 0.008800664328563041 ['ENSG00000089154|ENST00000300648|GCN1'] 4029 19462 AHFPINVVI True PC9_epitope_Rep4 1008.5756513100799 1008.57507496793 82.977 1 0.10330379494640511 0.0018316783958353417 0.00880189207456242 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 14122 12015 DSDDQWGEY True H1975_Epitope_Rep3 1113.3886979556898 1113.3876099358602 51.376 2 0.10329884901808012 0.0018316783958353417 0.008802874722059087 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None'] 43961 6214 IIEAEESR True NCI_RA007_Epitope_Rep2 945.47672511445 945.47562993586 28.778 2 0.10329699241843344 0.0018316783958353417 0.008803243614885384 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF'] 110221 6663 TEQPVTPEP True H1975_Epitope_Rep2 996.47639076128 996.47528993586 30.537 2 0.1032960402568993 0.0018316783958353417 0.008803432808204772 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 97731 10871 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 46.845 1 0.10329555533370911 0.0018316783958353417 0.008803529163343444 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ZNF451|p.H887Qfs*4|1|0.08|ENSG00000112200|chr6:57150770-57150773|ATAT/-|frameshift_variant', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 97575 7763 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 34.808 2 0.10329290120875263 0.0018316783958353417 0.008804056560841373 ['nc|ENSG00000128951|P33316-2|DUT'] 100223 17412 SIWDYFIAK True NCI_RA007_Epitope_Rep3 1141.58079626017 1141.5796899358602 76.396 2 0.10328685333565453 0.0018316783958353417 0.00880525843866135 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 38013 18543 HAMTEFLEV True PC9_epitope_Rep4 1075.50083168731 1075.4997299358602 79.4 2 0.10328648272989266 0.0018316783958353417 0.008805332093286265 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 77212 15617 NRSYEELVL True PC9_epitope_Rep4 1121.57168812845 1121.5705899358602 67.993 2 0.10328519186670426 0.0018316783958353417 0.008805588645573017 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant', 'ENST00000342449.7_2_21:40670494-40684812:-|nuORF', 'ENST00000546823.1_1_12:90313320-90313449:-|nuORF', 'nc|ENSG00000185658|Q9NSI6-4|BRWD1'] 104184 20133 SQFPGAITL True PC9_epitope_Rep4 932.4967322830399 932.49618496793 85.577 1 0.10328495054900179 0.0018316783958353417 0.008805636606996672 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 99120 14226 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 59.545 2 0.10327726760707763 0.0018316783958353417 0.008807163707869142 ['ENSG00000132646|ENST00000379143|PCNA'] 31984 5209 GEQEPPPPP True H1975_Epitope_Rep1 946.4396113297398 946.43850993586 25.099 2 0.10327649099863516 0.0018316783958353417 0.008807318084689248 ['ENSG00000108344|ENST00000264639|PSMD3'] 90486 6997 RELEDDARVIA True H1975_Epitope_Rep2 1285.6626283911698 1285.66152993586 31.838 2 0.10327558034969611 0.0018316783958353417 0.008807499109836478 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 120921 10874 VENSYSISV True H1975_Epitope_Rep3 996.47639076128 996.47584496793 46.909 1 0.103272888093864 0.0018316783958353417 0.008808034316120953 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 2518 6425 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.49668993586 29.69 2 0.10326955124213517 0.0018316783958353417 0.00880869770801237 ['ENSG00000146733|ENST00000275605|PSPH'] 124911 10434 VHQLSEEL True PC9_epitope_Rep5 953.4818104948899 953.48070993586 45.121 2 0.1032544401247028 0.0018316783958353417 0.008811702515426595 ['ENSG00000261150|ENST00000615648|EPPK1'] 31634 13645 GEFGGFGSV True NCI_RA007_Epitope_Rep5 855.3762827971899 855.37573496793 59.17 1 0.10325404147888305 0.0018316783958353417 0.008811781798459822 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 140261 18194 YRAPELML True PC9_epitope_Rep1 991.5160878286299 991.51498993586 74.774 2 0.10325057226548293 0.0018316783958353417 0.008812471787605006 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 33020 5512 GIHETTFN True NCI_RA007_Epitope_Rep1 917.4242956187701 917.42318993586 25.51 2 0.10324734796223048 0.0018316783958353417 0.00881311311327165 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000437653.1_1_3:175695464-175695797:-|nuORF', 'ENST00000418351.1_1_15:44281261-44281585:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 26373 8145 FHTTPNTSL True PC9_epitope_Rep4 1016.49270953176 1016.49160993586 38.784 2 0.10324692445019362 0.0018316783958353417 0.008813197354688551 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 44166 19813 IITKDLFQV True PC9_epitope_Rep3 1075.62774645259 1075.62664993586 81.443 2 0.10322937053185911 0.0018316783958353417 0.00881668971120999 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 31451 7551 GEAPAALEA True H1975_Epitope_Rep3 827.40249754503 827.40194496793 34.026 1 0.1032288646434537 0.0018316783958353417 0.008816790377531889 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 13957 8809 DRDGAQEVL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 38.828 2 0.10321145039252494 0.0018316783958353417 0.00882025629801706 ['ENST00000480065.1_1_1:222742724-222743894:-|nuORF', 'nc|ENSG00000143498|Q15573-2|TAF1A', 'ENSG00000143498|ENST00000352967|TAF1A'] 102511 9714 SLVNLGGSK True PC9_epitope_Rep3 873.4919812557699 873.49088993586 42.319 2 0.10320360536530018 0.0018316783958353417 0.008821818104063092 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 54131 17677 KVPEWVDTV True PC9_epitope_Rep1 1071.5600608155898 1071.5589699358602 72.789 2 0.10319238034156775 0.0018316783958353417 0.00882405326932507 ['ENSG00000105372|ENST00000598742|RPS19'] 106113 12174 STDHIPILY True H1975_Epitope_Rep2 1057.54441075145 1057.54387496793 51.911 1 0.10319144443559299 0.0018316783958353417 0.0088242396546896 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 25784 11326 FEVQVGPEA True H1975_Epitope_Rep3 974.4709114580198 974.46980993586 48.674 2 0.10318789685566863 0.0018316783958353417 0.008824946188372413 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 29802 21538 FVPQFISQL True PC9_epitope_Rep4 1077.5858816406098 1077.58478993586 91.025 2 0.10318617066315582 0.0018316783958353417 0.008825289995379446 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 96171 7493 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.5550749037902 36.597 3 0.10317800813654282 0.0018316783958353417 0.008826915905863155 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 44220 6802 IKIIAPPER True NCI_RA007_Epitope_Rep4 1035.64406522307 1035.64296993586 32.789 2 0.10316352887632907 0.0018316783958353417 0.008829800767052426 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 30052 17450 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6166049037902 72.374 3 0.10315940510666953 0.0018316783958353417 0.008830622556324922 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 84339 20513 PYTPFLTEL True PC9_epitope_Rep6 1079.55391280599 1079.55280993586 91.633 2 0.10315878924010224 0.0018316783958353417 0.008830745293181359 ['ENSG00000196305|ENST00000443024|IARS1'] 3106 9993 AGAGHFEVV True PC9_epitope_Rep2 885.43446637965 885.43336993586 43.766 2 0.10315009486296776 0.0018316783958353417 0.008832478181777048 ['ENSG00000169018|ENST00000306917|FEM1B'] 28089 16480 FQVKEVDVGL True PC9_epitope_Rep6 1132.6128246644398 1132.61172993586 75.815 2 0.10313937643842479 0.0018316783958353417 0.008834614935420497 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000598707.5_1_19:39306922-39322412:-|nuORF'] 21766 6621 ERVDSANAL True PC9_epitope_Rep5 973.4828731240499 973.48176993586 30.441 2 0.1031384164258623 0.0018316783958353417 0.00883480634133555 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 120316 6440 VEDYSQNVA True H1975_Epitope_Rep2 1023.4509042894298 1023.4498099358599 29.691 2 0.10313751220845474 0.0018316783958353417 0.008834986626534041 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6'] 118930 15498 VADPYVVIM True NCI_RA007_Epitope_Rep4 1005.5205045027299 1005.51940993586 67.307 2 0.10313719877641038 0.0018316783958353417 0.008835049120247608 ['ENSG00000071894|ENST00000616140|CPSF1'] 22880 8664 EVDLNLKGPK True NCI_RA007_Epitope_Rep2 1111.62372370131 1111.62262993586 38.347 2 0.10313645741400712 0.0018316783958353417 0.008835196938634046 ['ENSG00000124942|ENST00000378024|AHNAK'] 18099 14886 EIIDLVLDR True H1975_Epitope_Rep1 1084.61282466444 1084.61227496793 62.493 1 0.1031157308926511 0.0018316783958353417 0.008839330508803856 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 85860 10651 QHFDSVM[Oxidation]QL True PC9_epitope_Rep4 1119.5018946969099 1119.5007899358602 48.719 2 0.10311090637338129 0.0018316783958353417 0.008840292947636979 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 92803 16967 RPALPVSYLQA True PC9_epitope_Rep4 1213.68190728377 1213.68080993586 73.254 2 0.10310446692976663 0.0018316783958353417 0.008841577702958804 ['ENSG00000167615|ENST00000326764|LENG8'] 91756 10534 RKFLETVEL True NCI_RA007_Epitope_Rep1 1133.6444591458899 1133.6433699358602 44.959 2 0.10310289752934966 0.0018316783958353417 0.00884189084654345 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 142805 11875 YYSHLEGARF True PC9_epitope_Rep1 1241.5829215184897 1241.58127490379 50.544 3 0.10309827705667159 0.0018316783958353417 0.008842812834566924 ['ENSG00000142207|ENST00000382751|URB1'] 16460 10766 EELFIVSK True NCI_RA007_Epitope_Rep2 963.5276980581499 963.52660993586 46.478 2 0.10309790879862428 0.0018316783958353417 0.008842886322255298 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 132502 5960 VVDLM[Oxidation]AHM[Oxidation]A True NCI_RA007_Epitope_Rep2 1017.46233876449 1017.46124993586 27.792 2 0.10308880946375898 0.0018316783958353417 0.008844702325102096 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF', 'ENST00000432206.1_1_20:13373901-13374318:+|nuORF'] 42689 11297 IEISELNR True PC9_epitope_Rep2 972.52400966004 972.52290993586 48.777 2 0.10308171015685835 0.0018316783958353417 0.008846119420299647 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'KRT2|p.Q404H|1|0.29|ENSG00000172867|chr12:52647766-52647766|C/G|missense_variant', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 121375 6267 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51731496793 29.175 1 0.10307855715848292 0.0018316783958353417 0.008846748861328442 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 10002 16780 AYQHLFYLL True NCI_RA007_Epitope_Rep1 1166.6124307416198 1166.61132993586 69.397 2 0.10307823163348542 0.0018316783958353417 0.00884681384915428 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 26871 7897 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.5667749679299 35.322 1 0.10307106248542056 0.0018316783958353417 0.008848245214399707 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 2690 8261 AESSFSQEV True H1975_Epitope_Rep3 982.4243551884199 982.42324993586 36.762 2 0.10306997383005838 0.0018316783958353417 0.008848462590692073 ['ENSG00000047410|ENST00000367478|TPR'] 47568 17868 IVVDNVPQV True PC9_epitope_Rep5 981.5494961318899 981.54838993586 73.748 2 0.10306897209565355 0.0018316783958353417 0.008848662615648182 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 104232 15824 SQHGVIIQL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 65.858 2 0.10306320197982038 0.0018316783958353417 0.008849814868996898 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 128071 10710 VPLAIVNKA True PC9_epitope_Rep4 923.58040233735 923.57930993586 48.948 2 0.10305900953943055 0.0018316783958353417 0.008850652161504421 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 41508 15427 HYMSINDSF True PC9_epitope_Rep2 1112.45969515132 1112.4585899358601 64.618 2 0.10305759960355093 0.0018316783958353417 0.008850933763691188 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 107916 21686 SVVSQFITV True PC9_epitope_Rep1 978.5385970950199 978.53750993586 88.243 2 0.10305467622479923 0.0018316783958353417 0.008851517668603742 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'DAAM1|p.S926C|1|0.5|ENSG00000100592|chr14:59363703-59363703|C/G|missense_variant'] 90449 10862 REIVIIDTP True NCI_RA007_Epitope_Rep4 1054.60225998074 1054.60116993586 48.631 2 0.10303724936452362 0.0018316783958353417 0.008854999212814576 ['ENSG00000106560|ENST00000223293|GIMAP2'] 133692 6486 VYASDRATF True NCI_RA007_Epitope_Rep3 1028.4927095317598 1028.4916099358602 32.544 2 0.10303469618849706 0.0018316783958353417 0.008855509397593699 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 24541 4197 FAGDDAPRA True NCI_RA007_Epitope_Rep3 918.4195445915 918.4184499358599 23.15 2 0.10303343991186986 0.0018316783958353417 0.00885576044164642 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 114991 18788 TRADLIFTV True PC9_epitope_Rep4 1034.5760452328998 1034.57494993586 80.353 2 0.10302215071673416 0.0018316783958353417 0.008858016688664077 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 4297 23258 AIIEYMPLL True PC9_epitope_Rep2 1061.5831047592899 1061.58257496793 94.947 1 0.10302064059899442 0.0018316783958353417 0.008858318541092125 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 73294 12819 MTDGGLNLY True H1975_Epitope_Rep3 982.44298245802 982.44243496793 54.527 1 0.10301990663388069 0.0018316783958353417 0.008858465254510716 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant', 'NAV3|p.R1152Efs*27|1|0.47|ENSG00000067798|chr12:78119649-78119649|C/-|frameshift_variant'] 27437 23499 FLYPFPLAL True PC9_epitope_Rep4 1079.60555445603 1079.60497496793 98.692 1 0.10301988050969577 0.0018316783958353417 0.008858470476557325 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 22247 11359 ESYSVYVYK True PC9_epitope_Rep6 1136.5389910178399 1136.5378899358602 54.734 2 0.10301746836650603 0.0018316783958353417 0.008858952660281234 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 23887 13465 EYISTVKTL True PC9_epitope_Rep1 1052.57537652656 1052.57426993586 56.65 2 0.10300776753854997 0.0018316783958353417 0.008860892095312364 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 72034 7139 M[Oxidation]ETPSIAA True H1975_Epitope_Rep2 834.3793199527398 834.3787749679301 32.393 1 0.10300604074540101 0.0018316783958353417 0.008861237366625384 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 34825 17355 GQIEVVPEV True PC9_epitope_Rep6 968.5178616504398 968.51676993586 79.372 2 0.10300279238174191 0.0018316783958353417 0.008861886910096484 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 87739 8713 QRAPGVADL True PC9_epitope_Rep4 925.4981292653699 925.49702993586 41.012 2 0.10300076305048499 0.0018316783958353417 0.008862292718788642 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000400933.2_1_1:247348476-247348617:-|nuORF', 'ENST00000545220.1_1_12:7343495-7354840:+|nuORF'] 38835 4781 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 23.76 2 0.10299344894459862 0.0018316783958353417 0.008863755480512436 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 125827 17586 VLADALKSI True PC9_epitope_Rep2 928.5593325396001 928.55822993586 72.922 2 0.10298549204983028 0.0018598088886038608 0.0088653470579704 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 31456 5118 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 24.764 2 0.1029841975522111 0.0018598088886038608 0.008865606015730543 ['ENSG00000131116|ENST00000300811|ZNF428'] 90872 6212 REVDPPMGP True H1975_Epitope_Rep2 996.4698659121999 996.46876993586 28.864 2 0.10297625608597623 0.0018598088886038608 0.008867194825145327 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 36032 5264 GTYVSSVPR True NCI_RA007_Epitope_Rep3 964.4977949121999 964.49668993586 27.709 2 0.10297439900233006 0.0018598088886038608 0.008867566402003148 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 121373 6266 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 29.171 2 0.10297387303471206 0.0018598088886038608 0.008867671643594512 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 120245 3942 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 20.292 2 0.10297264347855375 0.0018598088886038608 0.008867917671871393 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 75726 24691 NLLDLLTEV True PC9_epitope_Rep1 1028.57537652656 1028.57426993586 99.863 2 0.1029684472267902 0.0018598088886038608 0.008868757371013239 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 74957 17558 NHM[Oxidation]AVAFVL True PC9_epitope_Rep5 1016.5113371818 1016.51022993586 72.545 2 0.10296110307145914 0.0018598088886038608 0.00887022717120315 ['ENSG00000164919|ENST00000520468|COX6C'] 93383 3664 RQALQKQAL True NCI_RA007_Epitope_Rep4 1054.6247267608198 1054.6236299358602 20.196 2 0.10296076115671642 0.0018598088886038608 0.00887029560496562 ['ENSG00000123689|ENST00000367029|G0S2'] 67 13109 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 55.549 1 0.10295071939672445 0.0018598088886038608 0.00887230567532969 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 128227 18215 VPNLQTVSV True PC9_epitope_Rep1 955.53384606775 955.53274993586 74.855 2 0.10294176008178736 0.0018598088886038608 0.008874099440479889 ['ENSG00000105866|ENST00000222584|SP4'] 45707 9987 IRPDNMSEY True PC9_epitope_Rep1 1123.49680893603 1123.49570993586 43.279 2 0.10294010756159522 0.0018598088886038608 0.008874430333385893 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'HDAC1|p.R77C|1|0.5|ENSG00000116478|chr1:32316731-32316731|C/T|missense_variant', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 49759 13026 KGTAFVTLL True H1975_Epitope_Rep2 948.56441792004 948.56332993586 55.225 2 0.10293900737811378 0.0018598088886038608 0.008874650635541369 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1'] 85372 5588 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.44940993586 26.496 2 0.10293171401420448 0.0018598088886038608 0.008876111200851118 ['ENSG00000196878|ENST00000356082|LAMB3'] 39432 5088 HKVPGDVSL True NCI_RA007_Epitope_Rep3 950.5185303567799 950.51742993586 27.005 2 0.10292980841313838 0.0018598088886038608 0.008876492853554144 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 141232 9732 YTDAALNY True H1975_Epitope_Rep3 929.41306222873 929.4125149679301 42.454 1 0.10292738987264805 0.0018598088886038608 0.008876977260154654 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 13220 12514 DLSLDDFK True H1975_Epitope_Rep1 951.45492704071 951.45382993586 53.176 2 0.10292491289850371 0.0018598088886038608 0.008877473396660568 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 109903 11942 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 51.013 1 0.10291349067426127 0.0018598088886038608 0.008879761605995603 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 49302 3361 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 17.647 2 0.10291203361214388 0.0018598088886038608 0.008880053539338049 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 46312 11357 ISQIVSSITAS True H1975_Epitope_Rep3 1104.60265390356 1104.60154993586 48.796 2 0.10290152401246179 0.0018598088886038608 0.00888215948944458 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 2507 9719 AEQNIIPSA True H1975_Epitope_Rep2 941.4818104948899 941.48070993586 42.37 2 0.10290027654585078 0.0018598088886038608 0.008882409492961322 ['ENSG00000183508|ENST00000369448|TENT5C'] 139583 23340 YLVYILNEL True PC9_epitope_Rep2 1138.6274120994199 1138.62630993586 95.252 2 0.10289642807768683 0.0018598088886038608 0.00888318080311371 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 39121 12309 HHYEGAVVIL True PC9_epitope_Rep4 1136.5978433066398 1136.5961849037901 55.159 3 0.10289299169497552 0.0018598088886038608 0.008883869577406264 ['ENSG00000163655|ENST00000496455|GMPS'] 140436 11826 YRGNVGVVL True PC9_epitope_Rep4 975.5501648382299 975.54906993586 53.256 2 0.10289290846739614 0.0018598088886038608 0.008883886259832647 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 45061 12103 IPHSLPGAVAA True PC9_epitope_Rep2 1031.5763795860698 1031.5752899358602 51.864 2 0.1028919049650028 0.0018598088886038608 0.00888408740772023 ['ENSG00000160113|ENST00000291442|NR2F6'] 87658 8978 QQSELQSQV True PC9_epitope_Rep5 1045.5040024914501 1045.50290993586 39.477 2 0.10288303377129855 0.0018598088886038608 0.008885865791783833 ['ENSG00000002834|ENST00000318008|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1', 'nc|ENSG00000078114|O76041-2|NEBL'] 122144 11812 VGAGAPVYLAA True H1975_Epitope_Rep3 987.5389314481899 987.53838496793 50.581 1 0.10287990089314816 0.0018598088886038608 0.00888649391297047 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 25671 5001 FEQEM[Oxidation]ATAA True NCI_RA007_Epitope_Rep5 1012.4171620134398 1012.41606993586 25.941 2 0.10287374137364329 0.0018598088886038608 0.008887728979823867 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 9437 21681 AVVEFLTSV True PC9_epitope_Rep2 963.5276980581499 963.52660993586 88.872 2 0.10286673439507016 0.0018598088886038608 0.008889134173960403 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 4096 11977 AHQQSIPAVL True PC9_epitope_Rep4 1062.5821932425 1062.58108993586 53.861 2 0.10285939744273857 0.0018598088886038608 0.008890605770236332 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 16116 9314 EEALPVTTA True H1975_Epitope_Rep2 929.47057710485 929.46948993586 40.786 2 0.10285822531421517 0.0018598088886038608 0.008890840889506401 ['ENSG00000184897|ENST00000333762|H1-10'] 71696 12817 MEDSPDLLAA True H1975_Epitope_Rep2 1060.47467650912 1060.47417496793 54.409 1 0.10285235351717004 0.0018598088886038608 0.008892018813167202 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000462436.1_1_7:97484616-97487685:-|nuORF'] 74237 7018 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 31.92 2 0.10285018772458755 0.0018598088886038608 0.008892453324153532 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 24611 16255 FAIPLIEKL True NCI_RA007_Epitope_Rep3 1042.64266824074 1042.6415699358602 71.626 2 0.10284990328509486 0.0018598088886038608 0.008892510391189407 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 97743 10921 SEILYSAPP True H1975_Epitope_Rep3 975.49131254943 975.4907649679301 47.095 1 0.1028435051413214 0.0018598088886038608 0.008893794142306915 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 76762 7143 NQWDGTQHGV True PC9_epitope_Rep4 1140.49483479008 1140.49372993586 34.752 2 0.10283942373703865 0.0018598088886038608 0.008894613145748001 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 45559 6627 IQRTPKIQVYS True NCI_RA007_Epitope_Rep4 1331.75613485319 1331.7550299358602 32.119 2 0.10283903289493845 0.0018598088886038608 0.008894691578684565 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 2283 7946 AENVAVPEAA True H1975_Epitope_Rep2 969.4767251144499 969.47562993586 35.512 2 0.10283463394089722 0.0018598088886038608 0.008895574392420086 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 99882 19142 SILSEVQQA True PC9_epitope_Rep3 973.50802524273 973.50692993586 78.849 2 0.10283099592534811 0.0018598088886038608 0.008896304559072173 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 132201 17500 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 72.108 2 0.1028214070320049 0.0018598088886038608 0.008898229370188358 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 59824 10624 LGEYGFQNA True H1975_Epitope_Rep1 997.4505103666099 997.4499649679301 45.822 1 0.10282003114716225 0.0018598088886038608 0.008898505589008609 ['CON__P02769'] 60879 20008 LHYGLPVVV True PC9_epitope_Rep5 995.5804023373499 995.57930993586 82.015 2 0.10281532763868273 0.0018598088886038608 0.008899449914455519 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 32070 6017 GESDRVFAT True H1975_Epitope_Rep2 980.45632402304 980.45522993586 28.123 2 0.10281351524697983 0.0018598088886038608 0.008899813814794714 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 76878 11696 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 49.864 2 0.1028126063335423 0.0018598088886038608 0.008899996315989915 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 97847 11938 SELPGAFEA True NCI_RA007_Epitope_Rep4 919.4287122928699 919.42816496793 52.92 1 0.10280948202533267 0.0018598088886038608 0.008900623674827782 ['ENSG00000126247|ENST00000246533|CAPNS1'] 90799 5873 RESNNMVVP True NCI_RA007_Epitope_Rep3 1044.5022286696399 1044.50112993586 30.079 2 0.10280832149635435 0.0018598088886038608 0.008900856719019894 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 101850 12236 SLPKGVVEV True PC9_epitope_Rep2 926.54368247546 926.54258993586 52.376 2 0.10280642630933302 0.0018598088886038608 0.008901237301449394 ['ENSG00000149257|ENST00000358171|SERPINH1'] 118548 20878 TYQQLFYLL True NCI_RA007_Epitope_Rep5 1187.6226610721499 1187.6215699358602 87.304 2 0.10280514895729759 0.0018598088886038608 0.008901493822009759 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'IQGAP2|p.L938Ffs*10|1|0.08|ENSG00000145703|chr5:76668813-76668813|C/-|frameshift_variant', 'IQGAP2|p.P1231Lfs*7|1|0.14|ENSG00000145703|chr5:76683143-76683143|C/-|frameshift_variant', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 14151 12136 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 51.765 2 0.10279860418231086 0.0018598088886038608 0.008902808268979493 ['ENSG00000149823|ENST00000279281|VPS51'] 122338 16720 VGDAIPAVEVF True H1975_Epitope_Rep1 1115.58627556343 1115.5851699358602 69.711 2 0.10279848009840967 0.0018598088886038608 0.008902833191682396 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5'] 90055 4666 RDYVAPTA True NCI_RA007_Epitope_Rep5 891.4450310633499 891.44392993586 24.632 2 0.10278710435974307 0.0018598088886038608 0.00890511833462318 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 2508 9669 AEQNIIPSA True H1975_Epitope_Rep3 941.4818104948899 941.48070993586 42.211 2 0.10278649561576263 0.0018598088886038608 0.008905240634152056 ['ENSG00000183508|ENST00000369448|TENT5C'] 54425 13223 KYFLWEEKF True NCI_RA007_Epitope_Rep4 1288.6492101731599 1288.64755490379 57.989 3 0.10277516616469624 0.0018598088886038608 0.008907517068319963 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 115221 19769 TRDVAFLL True PC9_epitope_Rep1 933.5283667644899 933.52726993586 80.869 2 0.10276614990990987 0.0018598088886038608 0.008909329109435789 ['ENSG00000164291|ENST00000380009|ARSK'] 104376 20857 SQIYPVVCV True PC9_epitope_Rep3 1006.5157534754599 1006.51464993586 85.499 2 0.10275789509479726 0.0018598088886038608 0.008910988430444916 ['ENSG00000144224|ENST00000272638|UBXN4'] 45181 9317 IPQLNSKAV True PC9_epitope_Rep4 968.5654805492 968.56438993586 43.447 2 0.10275486043511606 0.0018598088886038608 0.008911598509514205 ['ENSG00000157456|ENST00000288207|CCNB2'] 97662 15350 SEGSPLVVLP True H1975_Epitope_Rep2 996.54916177872 996.54806993586 64.202 2 0.10274883485684204 0.0018598088886038608 0.00891280999287467 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'KIF5B-MET|1|fusion'] 2455 10766 AEQLAKWIA True H1975_Epitope_Rep1 1028.5654805491997 1028.5643899358602 46.373 2 0.10274746905706234 0.0018598088886038608 0.00891308461814923 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 79238 6517 PAPPPPPPP True H1975_Epitope_Rep3 865.46978925921 865.46868993586 30.038 2 0.10274445297585466 0.0018598088886038608 0.008913691099002226 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 24816 16062 FAVAPNQNL True PC9_epitope_Rep2 972.50288029264 972.50178993586 67.038 2 0.10274301752284751 0.0018598088886038608 0.008913979757248272 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 21704 16654 ERSNDYFVL True PC9_epitope_Rep6 1141.54038800017 1141.53928993586 76.53 2 0.10274202110780616 0.0018598088886038608 0.008914180133706158 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.M19I|1|0.86|ENSG00000133138|chrX:106802910-106802910|G/A|missense_variant'] 90999 13764 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54470993586 64.741 2 0.10273798979308263 0.0018598088886038608 0.008914990864667583 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 114710 15155 TQIDHYVGI True PC9_epitope_Rep5 1044.52400966004 1044.52347496793 63.3 1 0.10273212000863263 0.0018598088886038608 0.008916171453712443 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 54328 13469 KYDPNVYSI True PC9_epitope_Rep2 1097.53932537101 1097.53822993586 57.088 2 0.10273051471019869 0.0018598088886038608 0.008916494353317993 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 1032 8674 AEAEPPLPA True H1975_Epitope_Rep1 893.4494477374499 893.4488949679301 38.294 1 0.10272362637567355 0.0018598088886038608 0.008917880042694658 ['ENST00000532687.5_1_11:33061130-33065300:+|nuORF'] 1121 7649 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43270993586 34.375 2 0.10272227880103188 0.0018598088886038608 0.008918151151235716 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 9933 12854 AYMDAPKAAL True PC9_epitope_Rep2 1049.52156713189 1049.52046993586 54.743 2 0.10272049709745677 0.0018598088886038608 0.008918509611095419 ['ENST00000494854.5_1_3:48510508-48510649:-|nuORF', 'ENST00000497863.1_1_3:48510508-48511042:-|nuORF', 'nc|ENSG00000164054|Q8N114-3|SHISA5', 'ENST00000465449.5_1_3:48510508-48514931:-|nuORF', 'nc|ENSG00000164054|Q8N114-2|SHISA5', 'nc|ENSG00000164054|Q8N114-5|SHISA5', 'ENSG00000164054|ENST00000296444|SHISA5'] 125843 18895 VLAETLTQV True PC9_epitope_Rep3 972.5491617787198 972.54806993586 77.903 2 0.1027156627725821 0.0018836600472511335 0.008919482295627902 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 108245 23042 SYIDVLPEF True PC9_epitope_Rep5 1081.53317736141 1081.53267496793 93.622 1 0.10271423853677533 0.0018836600472511335 0.008919768876694904 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 137181 12335 YAYDGKDYL True PC9_epitope_Rep6 1106.4920408254197 1106.49094993586 58.849 2 0.10271240472563 0.0018836600472511335 0.008920137884470151 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 13533 5318 DNTNEIYSGK True NCI_RA007_Epitope_Rep2 1139.50948179471 1139.5083899358601 25.307 2 0.10271142108299333 0.0018836600472511335 0.008920335823527454 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 17711 9445 EHNIFHNEV True PC9_epitope_Rep5 1137.5203212619301 1137.51868490379 41.285 3 0.10270695235202161 0.0018836600472511335 0.00892123512227887 ['ENSG00000118898|ENST00000345988|PPL'] 142207 13732 YVYPDERTAL True PC9_epitope_Rep2 1225.59790287629 1225.5968099358602 58.109 2 0.10270088344434489 0.0018836600472511335 0.008922456583944947 ['ENSG00000145391|ENST00000274031|SETD7'] 105304 15612 SRNEALIAL True PC9_epitope_Rep1 985.5556441414899 985.55454993586 64.871 2 0.10269570579427556 0.0018836600472511335 0.008923498793062153 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000120756|ENST00000457734|PLS1'] 32163 7830 GEVLISRV True NCI_RA007_Epitope_Rep3 871.51271670035 871.51160993586 37.921 2 0.1026859422509726 0.0018836600472511335 0.00892546441439375 ['nc|ENSG00000161203|Q96CW1-2|AP2M1', 'ENSG00000161203|ENST00000292807|AP2M1', 'ENST00000484469.5_1_3:183894781-183895400:+|nuORF', 'AP2M1|p.M89Dfs*22|1|0.1|ENSG00000161203|chr3:184179045-184179046|-/G|frameshift_variant', 'ENST00000466598.5_1_3:183894781-183896942:+|nuORF', 'ENST00000487958.5_1_3:183894781-183898060:+|nuORF', 'ENST00000472560.5_1_3:183894781-183898834:+|nuORF'] 28280 19860 FRNVEVLIY True PC9_epitope_Rep5 1151.6338944621898 1151.63278993586 81.441 2 0.10268422473105945 0.0018836600472511335 0.008925810232830102 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000498762.1_1_X:55748624-55758085:+|nuORF'] 10012 19377 AYQSIQNYL True PC9_epitope_Rep4 1098.53457434374 1098.53346993586 82.643 2 0.10267811698511561 0.0018836600472511335 0.008927040116699177 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 88020 13039 QRPPTIVL True PC9_epitope_Rep2 922.5600012459399 922.55890993586 55.435 2 0.10267695023185144 0.0018836600472511335 0.008927275078009946 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 47716 11928 IYDGFDGFAK True NCI_RA007_Epitope_Rep2 1131.52367530687 1131.52256993586 51.001 2 0.10267618536173623 0.0018836600472511335 0.008927429111126668 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 47450 17625 IVMQEVETV True PC9_epitope_Rep5 1046.53179746242 1046.5307099358602 72.806 2 0.10267404107540633 0.0018836600472511335 0.008927860951119967 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 140726 13528 YSDAFLNDSY True H1975_Epitope_Rep1 1193.48768372097 1193.4865899358601 57.157 2 0.10266796479328488 0.0018836600472511335 0.008929084768595347 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 73360 14450 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 60.737 2 0.10266655287340153 0.0018836600472511335 0.008929369164912842 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 96737 10349 SALSGHLETV True PC9_epitope_Rep4 1012.5189242796 1012.51782993586 47.503 2 0.10265807654908252 0.0018836600472511335 0.008931076693385123 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 7181 8309 AQYEEMAKC True PC9_epitope_Rep5 1071.4365171785898 1071.4354099358602 36.899 2 0.10265223000989628 0.0018836600472511335 0.008932254642604921 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 23109 15679 EVISKLYAV True PC9_epitope_Rep2 1020.5855472874398 1020.5849749679301 65.586 1 0.10264499614354736 0.0018836600472511335 0.00893371231409564 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 128496 16521 VPSPGLPVSA True PC9_epitope_Rep5 922.5123823471799 922.51128993586 68.548 2 0.10264023175240602 0.0018836600472511335 0.00893467249480424 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 107563 8673 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6341899358601 41.196 2 0.10261979649078258 0.0018836600472511335 0.008938791991911024 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 24672 20559 FALPGLLHA True PC9_epitope_Rep2 937.5385375253701 937.53744993586 84.514 2 0.10261897821206105 0.0018836600472511335 0.0089389569847656 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 71073 13747 LYLDEAHSI True PC9_epitope_Rep6 1059.52367530687 1059.52256993586 64.671 2 0.10261744325523364 0.0018836600472511335 0.00893926649221216 ['ENSG00000100596|ENST00000216484|SPTLC2'] 136888 11681 YAEMGTRTF True PC9_epitope_Rep5 1074.4804305958999 1074.47932993586 49.927 2 0.1026152778487826 0.0018836600472511335 0.008939703140491808 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2', 'ENST00000467305.1_1_13:96637506-96665674:-|nuORF'] 6969 21413 AQLDPSLVAFL True PC9_epitope_Rep6 1172.6441247927198 1172.64302993586 95.239 2 0.10261218995636631 0.0018836600472511335 0.00894032584093616 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 17718 13453 EHNSTIIVM True PC9_epitope_Rep1 1042.51173072418 1042.5106299358602 56.606 2 0.10261069976493739 0.0018836600472511335 0.008940626365925299 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 72220 20932 MHDFNLISI True PC9_epitope_Rep3 1088.53246616876 1088.53136993586 85.792 2 0.10260671256286519 0.0018836600472511335 0.008941430507499647 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 134903 19988 VYVSDIQEL True PC9_epitope_Rep5 1064.5389910178399 1064.5378899358602 81.937 2 0.10260126480031932 0.0018836600472511335 0.008942529328060769 ['ENSG00000132182|ENST00000254508|NUP210'] 127051 10320 VLSQHFQTV True PC9_epitope_Rep2 1057.55564414149 1057.5545499358602 45.024 2 0.10260123395560658 0.0018836600472511335 0.008942535549846965 ['ENSG00000167720|ENST00000344595|SRR'] 71680 6753 MEDAKVYVA True H1975_Epitope_Rep2 1024.4899326504399 1024.4888299358602 30.89 2 0.10260113076769951 0.0018836600472511335 0.008942556364241731 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 105066 9115 SRDQSTPII True PC9_epitope_Rep1 1015.5298233164699 1015.52872993586 39.912 2 0.10259987440454477 0.0018836600472511335 0.008942809793389713 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 72799 19858 MPFGNVVSA True PC9_epitope_Rep1 920.4425885351999 920.44148993586 81.2 2 0.10259337666813427 0.0018836600472511335 0.008944120603856954 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 18853 12068 ELDPTNMTY True H1975_Epitope_Rep2 1082.45902644498 1082.45847496793 51.502 1 0.10258725728610714 0.0018836600472511335 0.008945355256153023 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 62368 19677 LLGPPPVGV True PC9_epitope_Rep2 847.51673945163 847.51619496793 81.074 1 0.10258626851339248 0.0018836600472511335 0.008945554767213678 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 32405 15073 GFQNALIVR True PC9_epitope_Rep5 1016.5767139392399 1016.57560993586 62.986 2 0.10258584816340877 0.0018836600472511335 0.00894563958523965 ['CON__P02769'] 114811 17819 TQLGPPYHILV True PC9_epitope_Rep6 1236.68665831104 1236.68556993586 81.172 2 0.10258337277916413 0.0018836600472511335 0.008946139082781879 ['ENSG00000119616|ENST00000341162|FCF1'] 104558 12105 SQPPVQVSV True PC9_epitope_Rep6 939.5025459394699 939.50144993586 57.897 2 0.10258316966250801 0.0018836600472511335 0.008946180070039165 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 15443 19098 EALFQPSFL True NCI_RA007_Epitope_Rep1 1050.53859709502 1050.53807496793 78.428 1 0.1025814343884818 0.0018836600472511335 0.008946530241295908 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 97521 8778 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42816496793 38.695 1 0.10257741276115213 0.0018836600472511335 0.008947341839924515 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 40827 9777 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 42.595 2 0.10257649363921048 0.0018836600472511335 0.008947527336472378 ['ENSG00000146830|ENST00000678049|GIGYF1'] 32168 14119 GEVLMVQV True NCI_RA007_Epitope_Rep5 873.4629896266098 873.46188993586 60.998 2 0.10257097859202201 0.0018836600472511335 0.008948640456931908 ['ENSG00000120948|ENST00000240185|TARDBP'] 115393 7210 TRLEADEVAA True PC9_epitope_Rep4 1073.53530261973 1073.5342099358602 35.039 2 0.10256660274968117 0.0018836600472511335 0.008949523742381045 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 31876 10928 GELLFVHSA True H1975_Epitope_Rep2 971.50763131991 971.50652993586 47.067 2 0.10256641382531578 0.0018836600472511335 0.00894956187958343 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 142347 18380 YYEHEFVEL True PC9_epitope_Rep2 1227.5448046742697 1227.54370993586 76.03 2 0.10256614976128439 0.0018836600472511335 0.008949615185109935 ['nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 45152 22180 IPNSIMTILEA True PC9_epitope_Rep4 1200.6424105405601 1200.6413099358601 93.558 2 0.102565408754181 0.0018836600472511335 0.008949764770811303 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 40660 10692 HRQEIQVVL True PC9_epitope_Rep2 1120.63529144452 1120.6341899358601 46.439 2 0.10256505298404865 0.0018836600472511335 0.008949836590306771 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 131100 5434 VTEEEGSANM[Oxidation]Y True H1975_Epitope_Rep2 1244.4866981252399 1244.48560993586 25.928 2 0.10256254046348494 0.0018836600472511335 0.008950343809837011 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 7572 13348 ASETGFLTY True H1975_Epitope_Rep2 987.4549270407099 987.45382993586 56.475 2 0.10256013776000299 0.0018836600472511335 0.008950828885645966 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 90208 3502 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 18.384 2 0.10255333448717921 0.0018836600472511335 0.008952202518230671 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 41193 7120 HVIETLIGK True NCI_RA007_Epitope_Rep5 1008.5967806774798 1008.59568993586 34.066 2 0.10254633216400474 0.0018836600472511335 0.00895361655179438 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 134573 20643 VYSEVAAYEF True PC9_epitope_Rep5 1176.5339056373998 1176.53280993586 84.456 2 0.10254495157269572 0.0018836600472511335 0.008953895370618763 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 34708 7120 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 34.66 2 0.10253949962623439 0.0018836600472511335 0.008954996505812652 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 104998 13582 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.59957490379 60.137 3 0.10253931986562886 0.0018836600472511335 0.008955032814457932 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 128544 4282 VPSYPSKSA True PC9_epitope_Rep4 934.47599683846 934.47488993586 22.879 2 0.10252640871801037 0.0018836600472511335 0.008957641020403547 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 121877 14325 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 66.999 2 0.10252515864396958 0.0018836600472511335 0.008957893588974744 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 111550 9753 TIAPALVSK True PC9_epitope_Rep1 898.5487678559 898.54766993586 42.374 2 0.10250973404442434 0.0018836600472511335 0.00896101058190146 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 47227 20097 IVAPGTFEV True PC9_epitope_Rep5 931.5014833103099 931.5009349679301 82.349 1 0.10250695938450374 0.0018836600472511335 0.008961571393757679 ['ENSG00000143621|ENST00000361891|ILF2'] 48496 9764 KAIDIYEQV True NCI_RA007_Epitope_Rep4 1077.57062549929 1077.5695299358601 44.405 2 0.10250310290662853 0.0018836600472511335 0.008962350917640497 ['ENSG00000105402|ENST00000263354|NAPA', 'ENST00000597778.5_1_19:47995938-47996286:-|nuORF'] 7259 17190 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.5233099358602 71.141 2 0.10248687495827745 0.0018836600472511335 0.008965631844608272 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 9276 7393 AVPTNIIAAK True NCI_RA007_Epitope_Rep5 996.5967806774798 996.59568993586 35.115 2 0.102482190329625 0.0018836600472511335 0.008966579185681186 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 124772 12314 VHDESAFVV True PC9_epitope_Rep2 1001.4818104948898 1001.48070993586 52.678 2 0.10246635920316526 0.0018836600472511335 0.008969781318945113 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 34781 19841 GQGEVLVYV True PC9_epitope_Rep2 962.5072969667398 962.50618993586 81.709 2 0.10244024009030814 0.0018836600472511335 0.008975066782596236 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 57735 8660 LEEMEAPAA True H1975_Epitope_Rep2 959.4269980407098 959.42590993586 38.269 2 0.10243963266250253 0.0018836600472511335 0.008975189737226396 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 142767 18533 YYQSSVQYL True PC9_epitope_Rep5 1149.5342399905699 1149.5331499358601 76.31 2 0.10243757408576241 0.0018836600472511335 0.00897560644327589 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 133347 8333 VVVDPIQSVK True NCI_RA007_Epitope_Rep3 1082.63356010902 1082.6324699358602 39.893 2 0.10243693846685646 0.0018836600472511335 0.00897573511176675 ['ENSG00000115233|ENST00000409682|PSMD14'] 85040 12746 QEIATVVVP True NCI_RA007_Epitope_Rep4 954.5385970950199 954.5380449679301 56.086 1 0.10243615965880327 0.0018836600472511335 0.008975892768483847 ['ENSG00000139233|ENST00000266604|LLPH'] 35776 14737 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.5172549679301 61.952 1 0.10243289729475677 0.0018836600472511335 0.008976553208610264 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 104225 15198 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 63.72 2 0.10242863720654435 0.0018836600472511335 0.00897741570038038 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 27887 20273 FQDQQILTL True PC9_epitope_Rep4 1104.58152453616 1104.5804299358601 86.122 2 0.1024240478923438 0.0018836600472511335 0.008978344935747897 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 7192 11385 AQYEHDLEVA True PC9_epitope_Rep1 1173.5302172392899 1173.52912993586 48.673 2 0.10242370833341034 0.0018836600472511335 0.008978413692642505 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 115128 10195 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 46.892 2 0.10241947116356616 0.0018836600472511335 0.008979271714725037 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 17671 19874 EHLQLISL True PC9_epitope_Rep5 951.5389314481899 951.53782993586 81.497 2 0.10241826235847548 0.0018836600472511335 0.008979516510803006 ['ENSG00000163918|ENST00000296273|RFC4'] 97641 10516 SEFTKIITP True NCI_RA007_Epitope_Rep3 1034.5648118428599 1034.56370993586 48.424 2 0.10241270034713906 0.0018836600472511335 0.008980642960626197 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 132376 15777 VVAEELENV True PC9_epitope_Rep4 1000.50769088956 1000.50658993586 68.612 2 0.10239334523208214 0.0018836600472511335 0.008984563924027402 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.I97V|1|0.22|ENSG00000167196|chr15:75913212-75913212|A/G|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 60546 15601 LHDSSDYLL True PC9_epitope_Rep3 1061.50293986229 1061.50184993586 65.159 2 0.1023917277928678 0.0018836600472511335 0.008984891659546787 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000482825.7_1_1:150939531-150940017:-|nuORF', 'ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF', 'SPEN-CERS4|1|fusion', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF'] 72862 10855 MPQSGTGVSV True PC9_epitope_Rep2 961.45388149489 961.45278993586 47.072 2 0.10237797586555254 0.0018836600472511335 0.008987678623216405 ['ENSG00000115233|ENST00000409682|PSMD14'] 24382 21625 FAAFLPEFL True H1975_Epitope_Rep2 1053.55351888317 1053.5524299358601 89.461 2 0.1023755570445341 0.0018836600472511335 0.008988168906886588 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 43884 21646 IHVDFPVIL True PC9_epitope_Rep2 1051.60661708519 1051.6055299358602 88.736 2 0.10237070976437417 0.0018836600472511335 0.008989151505045853 ['ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 31559 9947 GEEEPPALP True H1975_Epitope_Rep1 937.4392769765698 937.43872496793 43.198 1 0.10236746573158238 0.0018836600472511335 0.008989809164497205 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 31464 5225 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.39082993586 25.184 2 0.10236266322646032 0.0018836600472511335 0.008990782856184118 ['ENSG00000131116|ENST00000300811|ZNF428'] 62220 5183 LLEVQGSRPGK True NCI_RA007_Epitope_Rep2 1182.6720708760597 1182.67042490379 24.78 3 0.10236008265872668 0.0018836600472511335 0.008991306099352144 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 35134 19038 GQWIAETGV True PC9_epitope_Rep1 959.4712458111899 959.47014993586 78.02 2 0.10235682667295397 0.0018836600472511335 0.00899196633385558 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 30792 15965 GANAILGVSL True H1975_Epitope_Rep3 913.5232813840499 913.5227349679301 66.865 1 0.10235681982731544 0.0018836600472511335 0.008991967722033097 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENO3|p.F106L|1|0.52|ENSG00000108515|chr17:4953719-4953719|T/A|missense_variant', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 34858 23106 GQLDFSEFL True PC9_epitope_Rep2 1054.49712620586 1054.4960299358602 94.368 2 0.1023539591505843 0.0018836600472511335 0.00899254783596489 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 41147 20326 HVDEFLTFV True PC9_epitope_Rep4 1105.54441075145 1105.5433099358602 86.326 2 0.10235252647451473 0.0018836600472511335 0.008992838380482085 ['ENSG00000142623|ENST00000375471|PADI1'] 99731 22287 SIIDEFLHI True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 93.965 2 0.10234995438925985 0.0018836600472511335 0.008993360018033155 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 44510 23423 ILLPQFLGV True PC9_epitope_Rep2 998.6164534928998 998.61534993586 95.569 2 0.10234883115957606 0.0018836600472511335 0.008993587826266572 ['ENSG00000099282|ENST00000373290|TSPAN15'] 142378 15207 YYEKLHTYF True PC9_epitope_Rep5 1262.5971746003 1262.59552490379 63.502 3 0.10234642235728662 0.0018836600472511335 0.008994076387033777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 96929 11155 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 50.686 2 0.10234327383810292 0.0018836600472511335 0.008994715017862505 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 105569 15854 SSDGAISLLTY True H1975_Epitope_Rep3 1125.55536935797 1125.55426993586 66.432 2 0.10232156878753379 0.0018836600472511335 0.008999118751811197 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 45798 8090 ISDAPAPAY True H1975_Epitope_Rep2 903.43379767331 903.43324496793 36.065 1 0.10231554803429577 0.0018836600472511335 0.009000340667707109 ['ENSG00000168476|ENST00000306306|REEP4'] 62747 16996 LLLPGELAK True PC9_epitope_Rep5 952.5957180483199 952.59462993586 70.394 2 0.10231388380528536 0.0018836600472511335 0.009000678452168752 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 54794 19446 KYNMVSYLL True PC9_epitope_Rep4 1129.58416738845 1129.58306993586 82.913 2 0.1023003916447365 0.0018836600472511335 0.009003417371641636 ['ENSG00000138678|ENST00000264409|GPAT3'] 115068 7857 TRDEDHIAL True PC9_epitope_Rep5 1068.51998690876 1068.5188899358602 35.165 2 0.10229803413632509 0.0018836600472511335 0.009003896029783038 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 54664 11616 KYLSGIAHF True PC9_epitope_Rep6 1034.5549158654999 1034.55380993586 55.804 2 0.10229758093414158 0.0018836600472511335 0.009003988048758403 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 82940 3809 PSDPKQYRY True H1975_Epitope_Rep2 1152.5563724174801 1152.55471490379 19.669 3 0.10228249798709989 0.0018836600472511335 0.009007051031648197 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC', 'ENST00000491410.1_1_1:52305873-52344287:-|nuORF'] 58515 14787 LEQEYGEPFLA True H1975_Epitope_Rep2 1294.60813320682 1294.60702993586 62.037 2 0.10228070035759548 0.0018836600472511335 0.00900741615350093 ['ENSG00000092330|ENST00000267415|TINF2', 'nc|ENSG00000092330|Q9BSI4-2|TINF2', 'ENST00000559147.1_1_14:24710388-24711538:-|nuORF'] 35895 4104 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 22.267 2 0.10227426540805125 0.0018836600472511335 0.009008723291522186 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 74801 10277 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.46637496793 44.862 1 0.10227369588363842 0.0018836600472511335 0.009008838988373647 ['ENSG00000144597|ENST00000396842|EAF1'] 42988 5795 IESSSPEV True H1975_Epitope_Rep2 846.39707781142 846.3965249679301 27.28 1 0.10226653893027624 0.0018836600472511335 0.009010293019380132 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 31458 5305 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 25.46 2 0.10225650611144368 0.0018836600472511335 0.009012331699912925 ['ENSG00000131116|ENST00000300811|ZNF428'] 107373 14208 SVLKSIQEV True PC9_epitope_Rep1 1001.57571087973 1001.5746099358599 59.474 2 0.10224819139786498 0.0018836600472511335 0.00901402159467313 ['ENSG00000039123|ENST00000230640|MTREX'] 12030 17311 DHSIIETL True PC9_epitope_Rep5 926.47091145802 926.46980993586 71.589 2 0.10224760226776042 0.0018836600472511335 0.009014141341880269 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 105805 6653 SSIQGQWPK True NCI_RA007_Epitope_Rep5 1029.5243440132099 1029.5232499358601 32.26 2 0.1022466998593159 0.0018836600472511335 0.009014324769331821 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 52819 8678 KPAEFTVDA True PC9_epitope_Rep4 976.4865615221598 976.48546993586 40.872 2 0.10224663519628319 0.0018836600472511335 0.009014337913157549 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 7196 10263 AQYENPPHI True PC9_epitope_Rep5 1067.50360856863 1067.5025099358602 44.463 2 0.10223772986413242 0.0018836600472511335 0.009016148244073095 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000594774.5_1_19:8618146-8642307:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 29075 15698 FTHSQFIVV True PC9_epitope_Rep6 1076.5654805492 1076.5643899358602 72.593 2 0.10223519481864196 0.0018836600472511335 0.009016663647526752 ['ENSG00000136824|ENST00000374793|SMC2'] 93420 14795 RQFDVDILI True NCI_RA007_Epitope_Rep3 1117.6131590176099 1117.61206993586 65.619 2 0.10223457374704326 0.0018836600472511335 0.009016789922724562 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 17877 19021 EHVPVVIGL True PC9_epitope_Rep5 961.5596668927699 961.55856993586 78.19 2 0.10223125796151439 0.0018836600472511335 0.009017464111172118 ['ENSG00000170677|ENST00000397942|SOCS6'] 110407 6738 TEVTPVTGA True H1975_Epitope_Rep3 873.4443623570098 873.44381496793 30.872 1 0.1022306747080196 0.0018836600472511335 0.009017582707306453 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 49189 7456 KEMENFEAP True H1975_Epitope_Rep3 1093.4750108622898 1093.47390993586 33.658 2 0.102228498917741 0.0018836600472511335 0.009018025135884105 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 1435 14594 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48546993586 61.504 2 0.10222794588157177 0.0018836600472511335 0.009018137594436527 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 30369 11933 GADHTQAIVL True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 51.222 2 0.10220645385418187 0.0018836600472511335 0.00902250898750277 ['nc|ENSG00000139626|P26010-2|ITGB7', 'ENSG00000139626|ENST00000267082|ITGB7'] 115060 6452 TRDEDHIAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 30.233 2 0.10219783871963856 0.0018836600472511335 0.009024261842153462 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 88722 10816 QTHSVFVNV True PC9_epitope_Rep6 1029.5243440132099 1029.5232499358601 52.452 2 0.1021951637364406 0.0018836600472511335 0.009024806166689912 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 47887 14647 IYIGGQEHF True PC9_epitope_Rep5 1062.5134449763398 1062.5123499358601 61.342 2 0.10219177810698596 0.0018836600472511335 0.009025495143706255 ['ENSG00000158125|ENST00000379416|XDH'] 2752 5253 AETKPPMAP True H1975_Epitope_Rep3 940.4688032830398 940.46770993586 25.29 2 0.102190860059632 0.0018836600472511335 0.009025681975421414 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 35441 4668 GSGTAEVELK True H1975_Epitope_Rep1 989.50293986229 989.50184993586 22.989 2 0.10219083310900416 0.0018836600472511335 0.009025687460196734 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 5233 21068 ALPEIFTEL True PC9_epitope_Rep6 1031.55391280599 1031.55280993586 93.862 2 0.10219069441824659 0.0018836600472511335 0.009025715685476336 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 31826 9466 GEIQEKLLSA True NCI_RA007_Epitope_Rep5 1086.5920892198599 1086.59098993586 43.046 2 0.10218898535088025 0.0018836600472511335 0.009026063508711359 ['ENSG00000261150|ENST00000615648|EPPK1'] 92771 14695 RPADVIFAT True PC9_epitope_Rep5 988.5341804209199 988.53308993586 61.527 2 0.10217853053777834 0.0018836600472511335 0.009028191514457719 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 71721 9605 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 41.921 1 0.10217625369811342 0.0018836600472511335 0.009028655013402378 ['ENSG00000026025|ENST00000544301|VIM'] 97356 12494 SEDFSPLSP True H1975_Epitope_Rep2 977.43419159613 977.43364496793 53.15 1 0.10217063315323731 0.0018836600472511335 0.00902979929206846 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENST00000511829.5_1_5:79738958-79744113:+|nuORF'] 49983 8683 KITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1246.62273800457 1246.6216499358602 38.398 2 0.10216598489417691 0.0018836600472511335 0.009030745729525242 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 41137 11794 HVADMLVKV True PC9_epitope_Rep4 1010.5582869937799 1010.55718993586 53.135 2 0.10215908440667558 0.0018836600472511335 0.009032150921278185 ['ENSG00000106144|ENST00000310447|CASP2', 'ENST00000472067.1_1_7:143000848-143002161:+|nuORF', 'ENST00000493642.5_1_7:142991831-143002161:+|nuORF'] 76912 12479 NRDNVGLVL True PC9_epitope_Rep6 998.5508931142199 998.54978993586 59.422 2 0.10214881899475119 0.0018836600472511335 0.00903424172274255 ['ENSG00000013523|ENST00000251089|ANGEL1'] 71067 10461 LYLDEAHSI True NCI_RA007_Epitope_Rep4 1059.52367530687 1059.52256993586 47.087 2 0.10213211315153319 0.0018836600472511335 0.00903764526734678 ['ENSG00000100596|ENST00000216484|SPTLC2'] 118946 5152 VADTPELQR True H1975_Epitope_Rep3 1027.52982331647 1027.5287299358602 24.921 2 0.10212980925094081 0.0018836600472511335 0.009038114746192136 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 142325 11164 YYEEQHPEL True PC9_epitope_Rep1 1206.5193182024198 1206.51822993586 47.828 2 0.10211942115694088 0.0018836600472511335 0.009040231877279627 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 67404 7318 LSSPATLNSR True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 32.962 2 0.10211807738476829 0.0018836600472511335 0.009040505777637035 ['CON__P00761'] 9536 10677 AVYEGHVSCV True PC9_epitope_Rep5 1062.4804305958999 1062.47932993586 46.058 2 0.10211435432248374 0.0018836600472511335 0.009041264688981344 ['ENSG00000105887|ENST00000393085|MTPN'] 71334 22844 LYQILQGIVF True PC9_epitope_Rep4 1192.6855956818797 1192.68448993586 96.091 2 0.10211185523255097 0.0018836600472511335 0.009041774139300818 ['ENSG00000170312|ENST00000395284|CDK1'] 45444 16200 IQIMKVEEI True PC9_epitope_Rep6 1101.61038213629 1101.60928993586 74.666 2 0.10210627046977444 0.0018836600472511335 0.009042912716900288 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 83673 9632 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 42.029 1 0.10210176292900854 0.0018836600472511335 0.009043831779190693 ['ENSG00000168143|ENST00000306858|FAM83B'] 8145 13075 ATELQSMMY True H1975_Epitope_Rep2 1072.45691827 1072.4563749679298 55.416 1 0.10210112403235473 0.0018836600472511335 0.00904396205388346 ['ENSG00000196284|ENST00000371459|SUPT3H'] 141178 17378 YSVDRLYEL True PC9_epitope_Rep6 1156.5764391557198 1156.57534993586 79.46 2 0.10209864068076763 0.0018836600472511335 0.009044468440608345 ['ENSG00000084774|ENST00000264705|CAD'] 24100 16596 EYPDRIMNTF True PC9_epitope_Rep6 1284.5808729131597 1284.5797699358602 76.29 2 0.1020940768045291 0.0018836600472511335 0.009045399143458612 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 4134 9254 AHSPSLQSL True PC9_epitope_Rep4 938.48214484806 938.48104993586 43.194 2 0.1020863081984255 0.0019405121679656435 0.00904698359215492 ['ENSG00000079313|ENST00000170168|REXO1'] 49096 5180 KEIESIVKA True H1975_Epitope_Rep2 1015.5913609438699 1015.59026993586 24.997 2 0.10208290754285708 0.0019405121679656435 0.009047677257758123 ['ENSG00000100209|ENST00000216027|HSCB'] 99014 13011 SHDVVVMTV True PC9_epitope_Rep2 985.49026700361 985.48916993586 55.331 2 0.10204984475983558 0.0019405121679656435 0.009054424061825923 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6'] 88305 6188 QSEVESTEY True H1975_Epitope_Rep3 1070.44039917538 1070.4393099358601 28.815 2 0.10204515758376985 0.0019405121679656435 0.009055380919078912 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 21790 14680 ERYFISHVL True PC9_epitope_Rep4 1162.61349337078 1162.6118549037901 64.402 3 0.10204409031235716 0.0019405121679656435 0.009055598809317264 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 71844 12627 M[Oxidation]ELITPISA True H1975_Epitope_Rep3 989.5103341222899 989.50922993586 53.774 2 0.10204075371121236 0.0019405121679656435 0.009056280030059954 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 76885 10308 NRDLATPVM True PC9_epitope_Rep4 1015.51206507735 1015.51096993586 47.336 2 0.10203086457233886 0.0019405121679656435 0.009058299345315976 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 43658 20050 IHDGFGFM[Oxidation]L True PC9_epitope_Rep2 1051.4797027003501 1051.47860993586 82.528 2 0.10202988371611489 0.0019405121679656435 0.009058499655036382 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 117669 18395 TVTSDLLQV True PC9_epitope_Rep6 974.5284263341399 974.5273299358599 83.403 2 0.10202571970066455 0.0019405121679656435 0.009059350074427316 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 9690 21552 AYGGAFYAF True PC9_epitope_Rep3 965.42831837005 965.4277649679301 88.194 1 0.10202536036654827 0.0019405121679656435 0.009059423465038772 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 35815 9135 GTITTFEHA True PC9_epitope_Rep4 975.4661604307499 975.46506993586 42.728 2 0.10202491255739607 0.0019405121679656435 0.009059514926641529 ['ENSG00000167658|ENST00000309311|EEF2'] 74268 5529 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.5074749679301 26.317 1 0.10201184462854318 0.0019405121679656435 0.0090621843413245 ['ENSG00000167658|ENST00000309311|EEF2'] 4563 9224 AKLRLEVNL True NCI_RA007_Epitope_Rep3 1054.6498788795 1054.6487899358601 43.379 2 0.1020093755490513 0.0019405121679656435 0.00906268879034254 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 138768 18097 YITERIIAV True PC9_epitope_Rep1 1076.62299542532 1076.62188993586 74.403 2 0.10200222985383324 0.0019405121679656435 0.009064148854117717 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 73030 8693 MRDPDDQYKL True PC9_epitope_Rep2 1279.58668656959 1279.58503490379 38.801 3 0.1020021617168393 0.0019405121679656435 0.00906416277748135 ['ENSG00000130332|ENST00000252622|LSM7'] 101320 22023 SLINVGLISV True PC9_epitope_Rep4 1013.6120963884499 1013.6115749679301 92.934 1 0.10199916640888876 0.0019405121679656435 0.009064774869975659 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 40649 12004 HRNGGLITL True PC9_epitope_Rep5 979.55631284783 979.55520993586 51.167 2 0.1019880214514862 0.0019405121679656435 0.00906705269498353 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 138312 10636 YHDIAQQAF True PC9_epitope_Rep6 1091.50360856863 1091.5025099358602 51.727 2 0.10198568013841024 0.0019405121679656435 0.009067531286208127 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 103680 6563 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 30.05 2 0.10197240899873888 0.0019405121679656435 0.009070244517002793 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 27096 17847 FLGYPITL True H1975_Epitope_Rep1 922.5164050984599 922.5158549679301 74.32 1 0.10195791747744085 0.0019405121679656435 0.009073208138909513 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 38804 9820 HGYGFDQAL True NCI_RA007_Epitope_Rep3 1006.4508447197799 1006.44974993586 45.701 2 0.10195603124721593 0.0019405121679656435 0.009073593955038524 ['nc|ENSG00000020129|Q9UBB6-2|NCDN', 'ENSG00000020129|ENST00000373243|NCDN'] 137763 5040 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 24.468 2 0.10195590237351501 0.0019405121679656435 0.00907362031589019 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 60905 11276 LHYPSTTAL True PC9_epitope_Rep6 1001.51819600361 1001.51708993586 54.386 2 0.10195405922768265 0.0019405121679656435 0.009073997335630917 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 64812 5791 LQDAEIAR True PC9_epitope_Rep1 914.4821448480599 914.48104993586 27.092 2 0.10195202745238495 0.0019405121679656435 0.009074412957368147 ['ENSG00000197956|ENST00000368719|S100A6'] 100190 23529 SIVDFLITA True PC9_epitope_Rep2 977.5433481222899 977.54224993586 95.979 2 0.10194109409521174 0.0019405121679656435 0.009076649807878636 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 100196 21610 SIVDFLITA True PC9_epitope_Rep6 977.5433481222899 977.54224993586 96.001 2 0.10194070139891143 0.0019405121679656435 0.009076730159267434 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 131570 21046 VTLGPVPEI True PC9_epitope_Rep1 923.53278343859 923.5322349679301 85.784 1 0.10193668648803401 0.0019405121679656435 0.009077551707701567 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 125111 22270 VIFDLPTTV True PC9_epitope_Rep5 1003.55899818643 1003.55790993586 90.668 2 0.10193464731748662 0.0019405121679656435 0.009077968998899774 ['ENSG00000047578|ENST00000261588|KATNIP'] 27653 20312 FPFAPPAAA True PC9_epitope_Rep5 887.4541391950698 887.45359496793 83.174 1 0.10191672808513909 0.0019405121679656435 0.009081636740583071 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 14729 10045 DVNAAIAAIK True H1975_Epitope_Rep1 984.5603951687599 984.55928993586 43.577 2 0.10191666597828188 0.0019405121679656435 0.009081649455199839 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A'] 54459 9315 KYGNANVW True PC9_epitope_Rep2 950.46101548066 950.45990993586 41.169 2 0.10191293068070548 0.0019405121679656435 0.009082414182770058 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 124859 12912 VHLDSAVAL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 61.2 2 0.10190701626031465 0.0019405121679656435 0.009083625168473794 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 98346 6786 SEYIHAQVA True NCI_RA007_Epitope_Rep2 1016.4927095317598 1016.49160993586 31.012 2 0.10190516084700506 0.0019405121679656435 0.009084005098794822 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 117946 23332 TWYPVSIPAF True PC9_epitope_Rep1 1179.5964463243097 1179.5953499358602 94.537 2 0.1019040088932009 0.0019405121679656435 0.009084240990387618 ['ENSG00000165733|ENST00000374518|BMS1'] 99597 7961 SIFDGRVVAK True NCI_RA007_Epitope_Rep4 1090.61349337078 1090.6123899358602 37.372 2 0.101895979049285 0.0019405121679656435 0.009085885466580623 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 53238 20215 KQFGNILIL True PC9_epitope_Rep2 1044.6331661861998 1044.63206993586 83.174 2 0.10189281360195962 0.0019405121679656435 0.00908653381448701 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 52686 12636 KLVTTVTEI True PC9_epitope_Rep4 1002.59611197114 1002.59500993586 56.444 2 0.10189177109457744 0.0019405121679656435 0.009086747350882128 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 67936 6598 LTDDEKTYY True H1975_Epitope_Rep3 1146.50808481238 1146.50698993586 30.334 2 0.10189058291784299 0.0019405121679656435 0.0090869907305419 ['nc|ENSG00000145293|Q9UHY7-2|ENOPH1', 'ENSG00000145293|ENST00000273920|ENOPH1'] 106988 10431 SVELPIVGK True NCI_RA007_Epitope_Rep5 940.5593325395998 940.55822993586 46.752 2 0.10188870998335066 0.0019405121679656435 0.00908737438494565 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 141314 12712 YTDSSSILNY True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 53.997 2 0.10188157643359953 0.0019405121679656435 0.009088835773015695 ['ENSG00000111647|ENST00000279907|BLTP3B'] 109157 21633 TAMDVVYAL True PC9_epitope_Rep5 981.4841189940099 981.48357496793 88.254 1 0.10187960357528433 0.0019405121679656435 0.009089239975046385 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 106491 10924 STLDIVLANK True NCI_RA007_Epitope_Rep5 1072.61282466444 1072.61172993586 48.659 2 0.10186969254678604 0.0019405121679656435 0.009091270821478188 ['ENSG00000167325|ENST00000300738|RRM1'] 115432 20887 TRLSNIFVI True PC9_epitope_Rep3 1061.62332977849 1061.62222993586 85.616 2 0.10186776501875787 0.0019405121679656435 0.009091665837409358 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF'] 27469 15625 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.4522749679301 65.255 1 0.1018655930738615 0.0019405121679656435 0.009092110962369934 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 96385 15258 RYVQPMASF True PC9_epitope_Rep1 1097.5328005219299 1097.5317099358601 63.51 2 0.10186556150781474 0.0019405121679656435 0.009092117431765112 ['nc|ENSG00000109111|Q7KZ85-2|SUPT6H', 'ENSG00000109111|ENST00000314616|SUPT6H'] 68627 20790 LTIDDGIFEV True PC9_epitope_Rep6 1120.56520576568 1120.5641099358602 92.737 2 0.10186276227726453 0.0019405121679656435 0.009092691145751204 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 47964 19960 IYIWDLNNF True NCI_RA007_Epitope_Rep4 1196.5866099165999 1196.58550993586 86.314 2 0.10185866040023711 0.0019405121679656435 0.009093531905257031 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 117995 7562 TYDNVHQQF True PC9_epitope_Rep6 1150.5043368446202 1150.5032299358602 38.361 2 0.10185366846273111 0.0019405121679656435 0.0090945552005117 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 68196 14194 LTDTFTAYY True H1975_Epitope_Rep1 1093.49679185269 1093.49627496793 59.775 1 0.10184865309249652 0.0019405121679656435 0.009095583410396698 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 106507 10242 STLPAITLK True NCI_RA007_Epitope_Rep4 942.5749826037401 942.57388993586 46.251 2 0.1018470509371017 0.0019405121679656435 0.009095911894580384 ['ENSG00000117984|ENST00000236671|CTSD'] 104372 21184 SQITSLVTL True PC9_epitope_Rep5 960.54916177872 960.54806993586 86.531 2 0.10184204112666496 0.0019405121679656435 0.009096939111453128 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 68633 22640 LTIEDGIFEV True PC9_epitope_Rep2 1134.58085582982 1134.5802749679299 92.579 1 0.10184028319813994 0.0019405121679656435 0.009097299585348073 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 12385 9286 DISLSDYK True NCI_RA007_Epitope_Rep2 939.45492704071 939.45382993586 40.73 2 0.10183788555221088 0.0019405121679656435 0.009097791259246505 ['ENSG00000117450|ENST00000319248|PRDX1'] 76844 12561 NRDDSNLYI True PC9_epitope_Rep1 1108.51490152832 1108.51380993586 53.185 2 0.10183649830134958 0.0019405121679656435 0.009098075747845222 ['ENSG00000100714|ENST00000652337|MTHFD1', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 32263 4738 GFAGDDAPR True NCI_RA007_Epitope_Rep1 904.40389452736 904.40278993586 22.51 2 0.10183535642003948 0.0019405121679656435 0.009098309924012886 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 71877 16054 MENEFLLPP True H1975_Epitope_Rep2 1088.5212327787199 1088.52012993586 66.954 2 0.1018350539971383 0.0019405121679656435 0.009098371945643736 ['ENSG00000121741|ENST00000610343|ZMYM2'] 2254 5913 AENPKLISA True H1975_Epitope_Rep3 941.5181960036099 941.51708993586 27.754 2 0.10183478491892817 0.0019405121679656435 0.009098427129204221 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 134689 11246 VYTGIDHHW True PC9_epitope_Rep5 1126.51959298594 1126.51848993586 48.249 2 0.1018345740877785 0.0019405121679656435 0.009098470367465018 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 115124 11746 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 50.198 2 0.10182247317139999 0.0019405121679656435 0.00910095241141377 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 75213 13463 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 56.919 2 0.10181659213239952 0.0019405121679656435 0.00910215891782948 ['ENSG00000116285|ENST00000377482|ERRFI1'] 134396 19287 VYPGDPLRF True PC9_epitope_Rep5 1062.5498304850598 1062.5487299358601 79.231 2 0.10181085586277447 0.0019405121679656435 0.009103335872236072 ['ENSG00000170892|ENST00000396388|TSEN34'] 55682 23329 LALFPGVAL True PC9_epitope_Rep3 899.5480395799099 899.5474949679301 95.014 1 0.10179462873430167 0.0019405121679656435 0.009106666106662744 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 89606 18992 QYPVIIHLI True PC9_epitope_Rep6 1094.64881625034 1094.6477099358601 85.697 2 0.10179342988637595 0.0019405121679656435 0.009106912188172486 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 132184 11113 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.49037496793 49.621 1 0.10179087252081126 0.0019405121679656435 0.009107437147095648 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 129287 19263 VQVPVPVTV True PC9_epitope_Rep4 936.5644179200399 936.56332993586 82.198 2 0.10178501244319718 0.0019405121679656435 0.00910864017407938 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 75837 20262 NLPIFLPRV True PC9_epitope_Rep4 1067.64915060351 1067.6480499358602 86.081 2 0.10177171071307306 0.0019405121679656435 0.009111371478024087 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 43443 11491 IGGIGTVPVGR True PC9_epitope_Rep4 1024.6029286870798 1024.60182993586 51.961 2 0.10176681905353382 0.0019405121679656435 0.00911237610185044 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 139980 5005 YQDPHSTAV True PC9_epitope_Rep3 1016.45632402304 1016.45522993586 24.343 2 0.10176405914689865 0.0019405121679656435 0.00911294296410318 ['ENSG00000146648|ENST00000275493|EGFR'] 104312 11118 SQIPAQPSV True PC9_epitope_Rep4 925.48689587533 925.48578993586 50.542 2 0.10176057227298566 0.0019405121679656435 0.009113659187818233 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 115492 18207 TRPPLLAL True PC9_epitope_Rep1 879.5541875895099 879.55308993586 74.825 2 0.10175538484472514 0.0019405121679656435 0.00911472481490509 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 55684 22488 LALFPGVAL True PC9_epitope_Rep4 899.5480395799099 899.54694993586 94.731 2 0.10173771581873893 0.0019405121679656435 0.009118355369600895 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 89616 18373 QYQKVPVLF True PC9_epitope_Rep2 1120.6280808057597 1120.6269899358601 76.001 2 0.10173035526054107 0.0019405121679656435 0.009119868194068927 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 109320 21351 TAYDNFVEL True PC9_epitope_Rep1 1070.49204082542 1070.49147496793 86.957 1 0.10172824335173539 0.0019405121679656435 0.009120302301665176 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 115547 5080 TRSITNTTV True PC9_epitope_Rep4 991.52982331647 991.52872993586 26.19 2 0.1017206128197104 0.0019405121679656435 0.009121870939717147 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 2121 16346 AELLPLVSA True H1975_Epitope_Rep2 911.53278343859 911.5322349679301 68.094 1 0.1017111865756902 0.0019405121679656435 0.009123809086287534 ['ENST00000569496.5_1_16:2514507-2514666:+|nuORF', 'nc|ENSG00000162062|Q7L2K0-2|TEDC2', 'ENSG00000162062|ENST00000361837|TEDC2'] 17976 4926 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 24.03 3 0.10171041475391203 0.0019405121679656435 0.009123967799398504 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 78081 16893 NVVMVNQGL True PC9_epitope_Rep3 972.5062514209199 972.50514993586 70.134 2 0.10171033990293579 0.0019405121679656435 0.009123983191475117 ['ENSG00000134057|ENST00000256442|CCNB1'] 30122 14894 FYMDTSHLF True NCI_RA007_Epitope_Rep3 1159.5008316873098 1159.4997299358602 66.014 2 0.10170664651815653 0.0019405121679656435 0.009124742716309473 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 27601 13752 FNPFVTSDR True PC9_epitope_Rep4 1081.51925863277 1081.5181699358602 60.794 2 0.10170401652945865 0.0019405121679656435 0.009125283596364782 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 26805 20903 FLAEDALNTV True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 85.678 2 0.10170269857554798 0.0019405121679656435 0.009125554656610142 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 40414 8486 HQVTLEESL True NCI_RA007_Epitope_Rep3 1054.5294889633 1054.52838993586 40.455 2 0.10170224677674 0.0019405121679656435 0.009125647578703749 ['ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 87792 12863 QRDPNSPLYSV True PC9_epitope_Rep1 1274.62551460646 1274.62440993586 54.352 2 0.10169998700279806 0.0019405121679656435 0.009126112363187463 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF'] 96015 15097 RYLPDTLLL True NCI_RA007_Epitope_Rep4 1102.63864548946 1102.63754993586 65.635 2 0.10169865132826807 0.0019405121679656435 0.00912638709195292 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 1833 12581 AEIDAHLVALA True H1975_Epitope_Rep2 1121.60807363717 1121.6069699358602 53.488 2 0.10168300702992117 0.0019405121679656435 0.009129605486096409 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 87703 15607 QRAAVIGDVI True PC9_epitope_Rep1 1040.5978433066398 1040.59674993586 64.853 2 0.10167560972898754 0.0019405121679656435 0.009131127660811837 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 40643 11930 HRNGGLITL True PC9_epitope_Rep1 979.55631284783 979.55520993586 50.753 2 0.10167017287471777 0.0019405121679656435 0.009132246580994503 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 108268 21473 SYIEHIFEI True PC9_epitope_Rep3 1149.57062549929 1149.57007496793 87.887 1 0.10166068723064714 0.0019405121679656435 0.009134199068365177 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 2236 11735 AENELGVVVA True H1975_Epitope_Rep2 999.5236753068698 999.52256993586 50.211 2 0.10165273331486514 0.0019405121679656435 0.00913583657924677 ['ENSG00000171311|ENST00000370902|EXOSC1'] 96614 7980 SAHDQSLVL True NCI_RA007_Epitope_Rep4 968.4927095317599 968.49160993586 37.453 2 0.10164463406650798 0.0019405121679656435 0.00913750429955278 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'ENST00000491769.1_1_2:238233419-238250825:-|nuORF'] 111069 13450 THDITTISI True PC9_epitope_Rep6 999.52367530687 999.52256993586 63.427 2 0.10164363959944739 0.0019405121679656435 0.009137709090876868 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 1919 5177 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5965849037902 25.013 3 0.10163235720775056 0.0019405121679656435 0.00914003279006401 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 105656 14581 SSEELPLYY True H1975_Epitope_Rep1 1099.5073565363898 1099.50677496793 61.293 1 0.1016248410996554 0.0019405121679656435 0.009141581107185845 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 27428 22022 FLYPFPLAL True H1975_Epitope_Rep3 1079.60555445603 1079.60497496793 92.085 1 0.10162467737586846 0.0019405121679656435 0.00914161483705827 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 40408 6426 HQVPAVSSV True PC9_epitope_Rep4 922.4872302285 922.48612993586 31.813 2 0.10162360002503427 0.0019405121679656435 0.009141836792547514 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 90232 4893 REEDPFRSTA True H1975_Epitope_Rep3 1206.5629143499 1206.56125490379 23.948 3 0.10162310995048114 0.0019405121679656435 0.009141937759266047 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 6127 13550 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 60.015 2 0.10162018377811374 0.0019405121679656435 0.009142540640847744 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 38834 4693 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 23.422 2 0.10161945197537633 0.0019405121679656435 0.009142691420694212 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 3518 9565 AGLQFPVGR True NCI_RA007_Epitope_Rep3 943.5239500903898 943.52284993586 44.709 2 0.10161402878072387 0.0019405121679656435 0.009143808884142878 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 118216 14931 TYKVISNEF True PC9_epitope_Rep3 1099.5549754351498 1099.5538699358601 62.567 2 0.10161260972733098 0.0019405121679656435 0.009144101305413412 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 107357 17961 SVLGSLSSV True PC9_epitope_Rep6 847.4650978015901 847.46454496793 81.716 1 0.10161184866455616 0.0019405121679656435 0.009144258139669422 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF', 'nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 110219 5413 TEQPSVSP True H1975_Epitope_Rep3 843.3974121645899 843.39686496793 25.883 1 0.10160854856396738 0.0019405121679656435 0.009144938230112384 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.I804Yfs*16|1|0.14|ENSG00000197056|chr1:35114240-35114240|A/-|frameshift_variant', 'ZMYM1|p.D473Mfs*48|1|0.09|ENSG00000197056|chr1:35113241-35113241|A/-|frameshift_variant'] 21892 13854 ESDLDYIQY True H1975_Epitope_Rep1 1144.4924347482402 1144.49187496793 58.438 1 0.10160568810500867 0.0019405121679656435 0.009145527757665004 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 1829 8490 AEIDAHLVA True H1975_Epitope_Rep2 937.48689587533 937.48578993586 37.609 2 0.10160546159244295 0.0019405121679656435 0.009145574442428521 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 34923 7232 GQNPTEAEL True NCI_RA007_Epitope_Rep3 957.44033960573 957.4397949679301 35.557 1 0.10160288989192919 0.0019405121679656435 0.009146104491866803 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 96157 15848 RYPDRITLI True PC9_epitope_Rep1 1145.65569253593 1145.65405490379 65.772 3 0.10160126393849561 0.0019405121679656435 0.009146439629946287 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 42417 6691 IEDLSQQA True H1975_Epitope_Rep2 902.4345259493001 902.43397496793 30.646 1 0.10159768046028939 0.0019405121679656435 0.009147178290439822 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA'] 121843 16132 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 66.868 2 0.10159697438143671 0.0019405121679656435 0.009147323840847299 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 9248 17142 AVPEIMDRI True PC9_epitope_Rep4 1042.5481162329 1042.5470099358602 73.942 2 0.1015921793146329 0.0019405121679656435 0.00914831234997164 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 107773 5374 SVSTVLTSK True NCI_RA007_Epitope_Rep5 920.51786165044 920.51676993586 27.36 2 0.1015830894113126 0.0019405121679656435 0.009150186526096723 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 108475 16126 SYMEVPTYL True NCI_RA007_Epitope_Rep5 1101.50524836141 1101.5041499358601 68.761 2 0.10157909761601035 0.0019405121679656435 0.009151009679442133 ['ENSG00000162511|ENST00000294507|LAPTM5'] 132246 15299 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 70.965 2 0.10157656848919908 0.0019405121679656435 0.009151531250723904 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 9363 10581 AVSDGVIKV True PC9_epitope_Rep4 886.5123823471799 886.51128993586 48.44 2 0.10157024704177829 0.0019405121679656435 0.009152835021075023 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 97530 8995 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 39.55 1 0.10156891931221301 0.0019405121679656435 0.009153108881997805 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 75040 16167 NHSIFSPSL True PC9_epitope_Rep2 1000.4977949122001 1000.49668993586 67.44 2 0.10156258832339402 0.001968941535139255 0.00915441483606802 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-8|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 103239 7337 SPLFSQHTA True PC9_epitope_Rep6 986.48214484806 986.48104993586 37.395 2 0.10156134091805409 0.001968941535139255 0.00915467217144445 ['ENSG00000167721|ENST00000301364|TSR1'] 27349 17380 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55805496793 72.146 1 0.10156114284251239 0.001968941535139255 0.009154713034376519 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 116736 12513 TVDNARIVL True PC9_epitope_Rep2 999.5712942056299 999.57018993586 53.439 2 0.10155179172343809 0.001968941535139255 0.00915664236670259 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 18367 7812 EITALAPSTM[Oxidation]K True PC9_epitope_Rep6 1176.6060254122801 1176.6049299358601 39.441 2 0.10153138212831668 0.001968941535139255 0.009160854648354767 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 119697 15758 VAVPLYDTL True NCI_RA007_Epitope_Rep5 989.54334812229 989.54224993586 67.332 2 0.1015308393443461 0.001968941535139255 0.009160966697429001 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 36014 21262 GTYDIFYTA True PC9_epitope_Rep5 1049.47057710485 1049.47007496793 86.835 1 0.10153051914903792 0.001968941535139255 0.009161032797247903 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 71691 13538 MEDIKILIA True H1975_Epitope_Rep2 1044.58891841572 1044.58782993586 57.211 2 0.10152823531106053 0.001968941535139255 0.00916150427673971 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 28884 12814 FTDEEVDEMY True H1975_Epitope_Rep1 1276.4805497352 1276.4794499358602 54.353 2 0.10152425283578775 0.001968941535139255 0.009162326481501417 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 31950 16303 GENPLQVLV True H1975_Epitope_Rep3 967.5338460677499 967.53274993586 68.184 2 0.10151676593573349 0.001968941535139255 0.009163872386195857 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 97357 12596 SEDFSPLSP True H1975_Epitope_Rep2 977.43419159613 977.43364496793 53.548 1 0.10150955723304321 0.001968941535139255 0.009165361084528803 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENST00000511829.5_1_5:79738958-79744113:+|nuORF'] 91772 13990 RKFWAGIVF True NCI_RA007_Epitope_Rep4 1122.6338348925399 1122.6327299358602 61.083 2 0.10150096784002602 0.001968941535139255 0.009167135217384029 ['ENSG00000165029|ENST00000374736|ABCA1'] 47703 16576 IYAPKLQEF True PC9_epitope_Rep4 1107.59644632431 1107.5953499358602 71.735 2 0.1014931051918303 0.001968941535139255 0.009168759530117183 ['ENSG00000175305|ENST00000308108|CCNE2'] 23332 17754 EVRDAAFEAL True PC9_epitope_Rep3 1119.5560380643099 1119.5549499358601 73.487 2 0.1014924018007481 0.001968941535139255 0.009168904854278851 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 77478 5933 NTAQGFRTV True PC9_epitope_Rep2 992.5039429218 992.50284993586 28.211 2 0.1014903283818151 0.001968941535139255 0.009169333245979076 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 4331 5535 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 28.769 2 0.10148966187082321 0.001968941535139255 0.009169470958729126 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 24833 15067 FAVPENSSV True PC9_epitope_Rep1 948.4552613938799 948.45416993586 62.775 2 0.1014791333582282 0.001968941535139255 0.009171646595282804 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 60554 20427 LHEDFVVEL True PC9_epitope_Rep1 1099.55497543515 1099.5538699358601 83.387 2 0.10147838057421162 0.001968941535139255 0.009171802171285435 ['ENSG00000116830|ENST00000369466|TTF2', 'TTF2|p.G62C|1|0.07|ENSG00000116830|chr1:117062439-117062439|G/T|missense_variant', 'nc|ENSG00000116830|Q9UNY4-2|TTF2'] 108650 14088 SYPSAFSKL True PC9_epitope_Rep4 998.50729696674 998.50618993586 62.098 2 0.10146865832475653 0.001968941535139255 0.009173811671667526 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 106382 9341 STIEYVIQR True NCI_RA007_Epitope_Rep2 1107.59242357303 1107.59187496793 40.943 1 0.10146830158846062 0.001968941535139255 0.009173885413833006 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 118568 8737 TYQSITERI True NCI_RA007_Epitope_Rep4 1109.57168812845 1109.5705899358602 40.401 2 0.10146776937040897 0.001968941535139255 0.009173995431481148 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.Y362Ifs*20|1|0.29|ENSG00000131558|chr7:133374899-133374900|-/G|frameshift_variant'] 100931 19178 SLFGGSVKL True PC9_epitope_Rep1 906.51746772762 906.51636993586 78.563 2 0.10146176452241563 0.001968941535139255 0.009175236813422877 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000477798.5_1_3:33840175-33866683:+|nuORF'] 141295 6420 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep3 1167.39140075807 1167.39087496793 29.671 1 0.1014589705879751 0.001968941535139255 0.009175814458224131 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 76562 19995 NQLDSLM[Oxidation]GL True PC9_epitope_Rep1 1005.48009662317 1005.47898993586 81.738 2 0.10145010807956985 0.001968941535139255 0.009177647008797241 ['ENSG00000135148|ENST00000412615|TRAFD1'] 62742 16530 LLLPGELAK True PC9_epitope_Rep2 952.5957180483199 952.59462993586 68.822 2 0.10144725118787072 0.001968941535139255 0.009178237819059203 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 2712 7171 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 32.516 1 0.10144193872088292 0.001968941535139255 0.009179336543531692 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 121632 17346 VFHPSQDLVF True PC9_epitope_Rep6 1187.5975089534697 1187.59640993586 79.335 2 0.10143298375182791 0.001968941535139255 0.009181188895592525 ['ENSG00000110107|ENST00000227524|PRPF19'] 105712 13196 SSEQTFMYY True H1975_Epitope_Rep3 1154.4590264449798 1154.45847496793 56.012 1 0.10143221742898849 0.001968941535139255 0.009181347427537404 ['ENSG00000115758|ENST00000234111|ODC1'] 108204 17517 SYGSVFKAI True PC9_epitope_Rep3 970.5123823471799 970.51128993586 72.562 2 0.10142959378549637 0.001968941535139255 0.009181890209906904 ['ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 3945 12548 AHDGGIYAL True PC9_epitope_Rep3 915.44503106335 915.44392993586 53.287 2 0.10142473898755942 0.001968941535139255 0.009182894657147117 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 8967 19771 AVGGLGSIIRV True PC9_epitope_Rep5 1040.6342288153598 1040.63312993586 81.094 2 0.10142300807946082 0.001968941535139255 0.009183252803765925 ['ENSG00000136950|ENST00000353214|ARPC5L'] 97537 8969 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42760993586 39.495 2 0.10141697758534543 0.001968941535139255 0.009184500693264035 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 74792 10428 NHDTALTL True PC9_epitope_Rep5 883.43994568291 883.43884993586 45.098 2 0.10141543972715972 0.001968941535139255 0.009184818948092201 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 93546 11249 RQLGLPTAL True NCI_RA007_Epitope_Rep4 967.5814649665099 967.58036993586 50.161 2 0.10140956578791219 0.001968941535139255 0.009186034638274755 ['ENSG00000053372|ENST00000330263|MRTO4'] 74831 8813 NHEEEISTL True PC9_epitope_Rep2 1070.48801807414 1070.4869299358602 39.252 2 0.1014064893479952 0.001968941535139255 0.009186671410124084 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 75423 19943 NIVNSIVGV True PC9_epitope_Rep4 913.5232813840499 913.52218993586 84.846 2 0.10140615104216431 0.001968941535139255 0.009186741436380411 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10'] 127692 10399 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.49088993586 44.985 2 0.10140465634530052 0.001968941535139255 0.009187050831274475 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 73505 21159 MVGEGFIEV True PC9_epitope_Rep2 979.4684689298699 979.46792496793 86.841 1 0.10140014750525642 0.001968941535139255 0.009187984199455889 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 13944 6065 DRAPAQPAM True PC9_epitope_Rep3 955.45455020123 955.45344993586 28.379 2 0.10139622061476612 0.001968941535139255 0.009188797173160939 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 57535 9301 LEDPTEVTP True H1975_Epitope_Rep1 999.47605640811 999.47494993586 40.684 2 0.10139587432582838 0.001968941535139255 0.009188868867746535 ['ENSG00000090889|ENST00000374403|KIF4A', 'KIF4A|p.G1151E|1|0.19|ENSG00000090889|chrX:70419740-70419740|G/A|missense_variant', 'ENSG00000226650|ENST00000435029|KIF4B'] 1127 6151 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.41196993586 28.632 2 0.10139462727990654 0.001968941535139255 0.00918912705669949 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 128236 17154 VPNPYIISA True PC9_epitope_Rep6 972.5280324113199 972.52692993586 78.568 2 0.1013908432404931 0.001968941535139255 0.009189910548482292 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 90249 9686 REEEQAFLV True H1975_Epitope_Rep1 1119.5560380643099 1119.5549499358601 42.182 2 0.10137872625480907 0.001968941535139255 0.009192419821581354 ['ENSG00000196843|ENST00000357485|ARID5A'] 26987 21148 FLEKLLPPV True PC9_epitope_Rep1 1054.6426682407398 1054.6415699358602 86.178 2 0.1013761463159751 0.001968941535139255 0.009192954178748932 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 45425 9677 IQHPNVITL True NCI_RA007_Epitope_Rep3 1033.59202965021 1033.59092993586 45.141 2 0.10137472434083025 0.001968941535139255 0.009193248711093309 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1', 'DAPK1|p.V1032Cfs*64|1|0.19|ENSG00000196730|chr9:87706165-87706165|G/-|frameshift_variant', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000472344.1_1_9:90113992-90254278:+|nuORF'] 53453 6524 KRFDDKYTL True PC9_epitope_Rep6 1184.6189726740397 1184.61733490379 33.766 3 0.10137459622096044 0.001968941535139255 0.009193275248882755 ['ENSG00000118363|ENST00000263672|SPCS2'] 26890 16028 FLDGNELTL True NCI_RA007_Epitope_Rep4 1020.51277627 1020.51166993586 69.52 2 0.10137063227603015 0.001968941535139255 0.00919409634698755 ['ENSG00000213719|ENST00000375784|CLIC1'] 54575 14980 KYITDWQNVF True NCI_RA007_Epitope_Rep4 1312.6451874218799 1312.6440899358602 65.086 2 0.10136978244203029 0.001968941535139255 0.009194272392153615 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 103973 22148 SQAPFIVAL True PC9_epitope_Rep1 944.5331177917599 944.53256496793 90.007 1 0.10136916779305961 0.001968941535139255 0.009194399720185384 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 31681 10197 GEFSITYKP True NCI_RA007_Epitope_Rep5 1040.5178616504397 1040.51676993586 45.854 2 0.1013681402426175 0.001968941535139255 0.009194612586879541 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 39295 19850 HIPDVITYL True PC9_epitope_Rep4 1069.58079626017 1069.5796899358602 84.484 2 0.10136374371131458 0.001968941535139255 0.009195523422823279 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 134569 20409 VYSEVAAYEF True PC9_epitope_Rep2 1176.5339056373998 1176.5333749679298 83.929 1 0.10134719258096864 0.001968941535139255 0.009198953120535747 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 125872 19203 VLAPLPLHGV True PC9_epitope_Rep1 1014.6226015025001 1014.62150993586 78.659 2 0.1013447316781241 0.001968941535139255 0.009199463169380239 ['nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 1984 11969 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47511496793 51.197 1 0.10133003451241812 0.001968941535139255 0.009202509880778054 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 20107 5053 EM[Oxidation]PPTNPIR True H1975_Epitope_Rep3 1069.5226301414898 1069.5215299358601 24.559 2 0.10131404612880268 0.001999048072346502 0.009205825358514155 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 2566 7971 AEQRVPLSV True H1975_Epitope_Rep2 997.5556441414899 997.55454993586 35.607 2 0.10130044628217429 0.001999048072346502 0.00920864643101574 ['ENSG00000125826|ENST00000356286|RBCK1'] 26024 5053 FGGPGTASRP True NCI_RA007_Epitope_Rep2 945.4668291370899 945.4657299358599 24.28 2 0.10129974935968988 0.001999048072346502 0.009208791018839124 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 23903 11297 EYKNTNEMF True PC9_epitope_Rep5 1174.49647458286 1174.49536993586 48.447 2 0.10129782647318807 0.001999048072346502 0.009209189963974167 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 18098 14850 EIIDLVLDR True H1975_Epitope_Rep1 1084.61282466444 1084.61172993586 62.352 2 0.10128652608514178 0.001999048072346502 0.009211534812841544 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 96855 6529 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42828993586 30.086 2 0.10128576112852615 0.001999048072346502 0.009211693563249926 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 1713 10073 AEGPEVICA True H1975_Epitope_Rep3 887.4058686733099 887.40531496793 43.784 1 0.10128374256006947 0.001999048072346502 0.00921211248660638 ['ENSG00000010292|ENST00000315579|NCAPD2'] 99847 20258 SILGKFAVV True PC9_epitope_Rep5 932.5695033004798 932.56840993586 82.972 2 0.10128190526322127 0.001999048072346502 0.009212493805648637 ['ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 138309 13112 YHDIAQQAF True PC9_epitope_Rep3 1091.50360856863 1091.5025099358602 55.457 2 0.10127739601067264 0.001999048072346502 0.009213429735862878 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 104192 18911 SQFPGAITL True PC9_epitope_Rep6 932.4967322830399 932.49562993586 85.386 2 0.10127287832267766 0.001999048072346502 0.009214367508267231 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 28473 4507 FSDSKIQKY True H1975_Epitope_Rep2 1114.56587447202 1114.56476993586 22.448 2 0.10127224803295654 0.001999048072346502 0.00921449834978281 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL', 'ENST00000514335.1_1_5:37051847-37064632:+|nuORF'] 26322 17084 FHNELLTQL True PC9_epitope_Rep6 1113.5818588893299 1113.5807699358602 78.281 2 0.1012667163599733 0.001999048072346502 0.009215646743263669 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 134835 12613 VYVDLGGSHVF True NCI_RA007_Epitope_Rep3 1191.5924235730301 1191.5913299358601 56.857 2 0.10125754452391043 0.001999048072346502 0.009217551148705054 ['ENSG00000165733|ENST00000374518|BMS1'] 89259 17060 QVVIFVKSV True PC9_epitope_Rep5 1017.6222671493299 1017.6211699358599 70.64 2 0.10124744611239174 0.001999048072346502 0.009219648380846384 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF', 'ENST00000474961.5_1_6:31498213-31499248:-|nuORF', 'ENST00000462256.5_1_6:31498213-31500844:-|nuORF'] 3947 12392 AHDGGIYAL True PC9_epitope_Rep5 915.44503106335 915.44392993586 52.662 2 0.10124638981680122 0.001999048072346502 0.009219867778097636 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 6790 21536 AQEDYLFSV True PC9_epitope_Rep5 1070.49204082542 1070.49094993586 87.874 2 0.10123910541439218 0.001999048072346502 0.009221380916776076 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 1733 5582 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 26.511 1 0.10123656932087044 0.001999048072346502 0.009221907777822256 ['ENSG00000161847|ENST00000617231|RAVER1'] 38331 9454 HEHIEILTV True H1975_Epitope_Rep1 1089.58185888933 1089.5807699358602 41.282 2 0.1012328002087448 0.001999048072346502 0.009222690845738811 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1'] 9874 13090 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 55.355 2 0.10122742775257114 0.001999048072346502 0.009223807133323757 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 108193 19737 SYGKINILL True PC9_epitope_Rep5 1019.60153170475 1019.60042993586 80.966 2 0.10122649262838286 0.001999048072346502 0.009224001446415785 ['ENSG00000112249|ENST00000369162|ASCC3'] 134809 23252 VYTVVDEMFL True PC9_epitope_Rep5 1214.5893123385397 1214.58877496793 94.425 1 0.10122495304494016 0.001999048072346502 0.009224321370990041 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 39845 16790 HPAAFPLPV True PC9_epitope_Rep6 947.52288746123 947.5217899358599 77.086 2 0.10121462597788398 0.001999048072346502 0.009226467604521692 ['ENSG00000108523|ENST00000262482|RNF167'] 26513 19666 FIFSDTHEL True PC9_epitope_Rep1 1107.52367530687 1107.52256993586 80.469 2 0.10121081630808197 0.001999048072346502 0.009227259473919528 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 114899 15447 TQSELATAL True PC9_epitope_Rep5 932.4814761417199 932.48036993586 64.426 2 0.10120872793659982 0.001999048072346502 0.009227693585745446 ['ENSG00000138629|ENST00000395081|UBL7'] 97607 11227 SEEVTPIAV True H1975_Epitope_Rep3 943.4862271689899 943.4856749679301 48.286 1 0.1012036735440501 0.001999048072346502 0.009228744328254749 ['ENSG00000205339|ENST00000379719|IPO7'] 37852 21292 GYMEGYYTF True PC9_epitope_Rep3 1129.44264810485 1129.4415499358602 87.194 2 0.10120263638164242 0.001999048072346502 0.0092289599550093 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 121337 4861 VEVEGTVKA True H1975_Epitope_Rep1 930.5022115862998 930.50110993586 23.777 2 0.10120002284286835 0.0020200744902468277 0.00922950333286271 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.W2288C|1|0.56|ENSG00000278540|chr17:37097023-37097023|C/A|missense_variant'] 97514 5023 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39725496793 24.442 1 0.10119850451198428 0.0020200744902468277 0.009229819021371688 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 99269 17178 SHQLDFNVL True PC9_epitope_Rep6 1071.53490869691 1071.53380993586 78.663 2 0.10119827305384049 0.0020200744902468277 0.009229867146623312 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 114761 5520 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 28.712 2 0.10118579951443481 0.0020200744902468277 0.009232461026060342 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 1998 10646 AEIQGVIDA True H1975_Epitope_Rep2 914.4709114580199 914.4703649679301 45.974 1 0.10118034661586228 0.0020200744902468277 0.009233595178684247 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 116303 6038 TTDSSYGQNY True H1975_Epitope_Rep2 1134.4465471849799 1134.44597496793 28.203 1 0.10117430369794343 0.0020200744902468277 0.009234852205794631 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 77901 21722 NVIESFTEL True PC9_epitope_Rep2 1050.5233409537 1050.5222499358601 89.031 2 0.1011712401148648 0.0020200744902468277 0.009235489544481642 ['nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'ENSG00000197562|ENST00000248139|RAB40C'] 76935 5656 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 27.142 2 0.10117032296260632 0.0020200744902468277 0.009235680354297084 ['ENSG00000241685|ENST00000262942|ARPC1A'] 21893 13873 ESDLDYIQY True H1975_Epitope_Rep1 1144.4924347482402 1144.4913299358602 58.511 2 0.10115834629008784 0.0020200744902468277 0.00923817239919922 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 121159 8021 VESAYEVIK True NCI_RA007_Epitope_Rep2 1036.5440763982797 1036.5429699358601 35.831 2 0.10115144288692828 0.0020200744902468277 0.009239609116722121 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 142577 19975 YYLNLIEL True NCI_RA007_Epitope_Rep5 1039.5589981864298 1039.5579099358602 83.749 2 0.1011502599355165 0.0020200744902468277 0.00923985533083726 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 141931 12915 YVFPGVTRL True H1975_Epitope_Rep3 1050.58621599378 1050.5851099358601 54.905 2 0.10114618756746713 0.0020200744902468277 0.009240702983020892 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 107287 23536 SVLDGLLYV True PC9_epitope_Rep5 977.54334812229 977.54279496793 95.516 1 0.10114383800043639 0.0020200744902468277 0.009241192072806322 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 60552 10242 LHEAGGQIL True PC9_epitope_Rep1 936.5028802926399 936.50178993586 44.277 2 0.10113895417960732 0.0020200744902468277 0.009242208776420756 ['ENSG00000163482|ENST00000295709|STK36', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 11287 20902 DEHLQLISL True PC9_epitope_Rep3 1066.56587447202 1066.56476993586 85.674 2 0.10113538773332137 0.0020200744902468277 0.009242951299445275 ['ENSG00000163918|ENST00000296273|RFC4'] 75153 8689 NHYQKQLEI True PC9_epitope_Rep3 1171.5985715826298 1171.59746993586 38.371 2 0.10113253847707233 0.0020200744902468277 0.009243544546795145 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 71821 14023 MEIPTTIQC True H1975_Epitope_Rep2 1034.47765371458 1034.4770749679299 59.089 1 0.10113038947221806 0.0020200744902468277 0.009243992018019469 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 1016 8679 AEAEALYSA True H1975_Epitope_Rep2 923.42362691243 923.42307496793 38.344 1 0.10113017626804814 0.0020200744902468277 0.009244036413062163 ['ENSG00000183891|ENST00000333610|TTC32'] 27549 5785 FNDPNAKEM True PC9_epitope_Rep6 1064.45969515132 1064.4585899358601 30.44 2 0.10111964488122366 0.0020200744902468277 0.009246229595150531 ['ENSG00000056097|ENST00000265069|ZFR'] 104499 20815 SQMPTVIYV True PC9_epitope_Rep1 1036.5263181591597 1036.5252299358601 84.893 2 0.10111659694933255 0.0020200744902468277 0.009246864425972905 ['ENSG00000121931|ENST00000369763|LRIF1'] 49315 5605 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 26.561 2 0.10111318952395025 0.0020200744902468277 0.009247574182418141 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 103581 6235 SPSPPFGHSA True PC9_epitope_Rep6 982.4508447197801 982.44974993586 32.465 2 0.10111240935599168 0.0020200744902468277 0.009247736696395767 ['ENSG00000141232|ENST00000499247|TOB1'] 92824 11982 RPAQPTLWTA True PC9_epitope_Rep6 1139.60874234351 1139.60764993586 57.358 2 0.1011113251877435 0.0020200744902468277 0.009247962540121021 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 20742 9752 EQEVNILK True PC9_epitope_Rep5 971.5287606873098 971.52766993586 42.481 2 0.1011104138882944 0.0020200744902468277 0.009248152377531635 ['ENSG00000100345|ENST00000216181|MYH9'] 97729 10620 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 45.874 1 0.1011101136078902 0.0020200744902468277 0.009248214931283338 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ZNF451|p.H887Qfs*4|1|0.08|ENSG00000112200|chr6:57150770-57150773|ATAT/-|frameshift_variant', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 108173 20811 SYGDILHVI True PC9_epitope_Rep1 1015.53384606775 1015.5332749679301 84.877 1 0.10110741873907991 0.0020200744902468277 0.009248776338551317 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 5999 10066 APILVPHTA True PC9_epitope_Rep4 917.5334521449299 917.53234993586 46.386 2 0.10110088569161328 0.0020200744902468277 0.00925013746806159 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52'] 17362 11618 EHDGSLFQA True PC9_epitope_Rep5 1002.4406739589 1002.43956993586 49.684 2 0.10109882903604644 0.0020200744902468277 0.009250566002219117 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 40368 15295 HQSGIVQLL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 70.95 2 0.10109316910063902 0.0020200744902468277 0.009251745430415254 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 2060 7812 AELATRALP True NCI_RA007_Epitope_Rep4 940.5341804209199 940.53308993586 36.735 2 0.10109232215374081 0.0020200744902468277 0.009251921931222942 ['ENSG00000173801|ENST00000393931|JUP'] 317 19216 AAIASLLYL True H1975_Epitope_Rep2 933.55351888317 933.55242993586 79.754 2 0.1010901142070163 0.0020200744902468277 0.00925238207485621 ['ENSG00000172992|ENST00000651974|DCAKD'] 78080 16870 NVVMVNQGL True PC9_epitope_Rep1 972.5062514209199 972.50514993586 69.715 2 0.10108885195115092 0.0020200744902468277 0.00925264514313435 ['ENSG00000134057|ENST00000256442|CCNB1'] 6190 19866 APNPVVFVA True PC9_epitope_Rep1 912.5069030439199 912.5063549679301 81.233 1 0.10106456883283112 0.0020200744902468277 0.009257707412157796 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 124777 8535 VHDPAGALQAA True PC9_epitope_Rep2 1048.5301576696397 1048.5290699358602 38.192 2 0.10106102386570019 0.0020200744902468277 0.00925844664855185 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 114843 18679 TQNDIISTL True PC9_epitope_Rep4 1003.51858992643 1003.51748993586 79.929 2 0.10105405366866305 0.0020200744902468277 0.009259900317260709 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 29546 6455 FVIATSTK True H1975_Epitope_Rep3 865.49091862661 865.48982993586 29.804 2 0.10105139065107739 0.0020200744902468277 0.009260455760325345 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 131116 16603 VTEEIFLEY True H1975_Epitope_Rep2 1141.55430672881 1141.5532099358602 69.091 2 0.1010491640455878 0.0020200744902468277 0.009260920202548378 ['ENSG00000100418|ENST00000263256|DESI1', 'ENST00000463886.1_1_22:41998573-42000148:-|nuORF'] 1371 8018 AEEDIFNKP True H1975_Epitope_Rep1 1061.50293986229 1061.50184993586 35.785 2 0.10104729614689563 0.0020200744902468277 0.00926130984020115 ['ENSG00000174371|ENST00000366548|EXO1'] 136821 12034 YAAQPELL True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 51.369 1 0.10104287805778274 0.0020200744902468277 0.009262231501854271 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 64878 5951 LQEAEKELK True NCI_RA007_Epitope_Rep2 1086.5920892198599 1086.59098993586 27.758 2 0.10103069261110925 0.0020200744902468277 0.009264773974445261 ['ENSG00000135862|ENST00000258341|LAMC1', 'ENST00000495918.1_1_1:183103830-183107010:+|nuORF'] 140216 15040 YQVGVHYEL True PC9_epitope_Rep4 1106.5396597241802 1106.53856993586 65.783 2 0.10102027928426204 0.0020200744902468277 0.00926694722693719 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 60599 6021 LHHDDPEVL True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 30.14 2 0.10101938396657392 0.0020200744902468277 0.009267134101772394 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 134629 17560 VYSPHVLNL True PC9_epitope_Rep5 1040.5654805492 1040.5643899358602 72.552 2 0.10100811001268907 0.0020200744902468277 0.0092694875622877 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 1531 6396 AEEPASVTP True H1975_Epitope_Rep3 899.42362691243 899.42252993586 29.579 2 0.10100802440385928 0.0020200744902468277 0.009269505435492502 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF', 'MIA3|p.T1568Lfs*50|1|0.04|ENSG00000154305|chr1:222658815-222658816|-/CTGTCCTTTAGGAT|frameshift_variant'] 9976 21400 AYPEYLITY True PC9_epitope_Rep5 1131.54882742555 1131.54827496793 87.378 1 0.10100062937485482 0.0020200744902468277 0.009271049476368656 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 97724 13151 SEIGGITIA True H1975_Epitope_Rep2 859.46509780159 859.46454496793 55.707 1 0.10099784295068388 0.0020200744902468277 0.0092716313301093 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000591556.1_1_17:40458135-40460407:+|nuORF', 'ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 74264 5403 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 25.845 2 0.10098829273904013 0.0020200744902468277 0.009273625845461729 ['ENSG00000167658|ENST00000309311|EEF2'] 9086 17897 AVIGDVIRV True PC9_epitope_Rep2 940.57056592964 940.56946993586 74.144 2 0.1009867951046234 0.0020200744902468277 0.009273938656410992 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 79347 16533 PARTGIISL True PC9_epitope_Rep1 926.5549158655 926.55380993586 68.417 2 0.10098386905221088 0.0020200744902468277 0.00927454985023283 ['ENSG00000215217|ENST00000399810|CFAP90'] 93036 8356 RPLLKAITA True PC9_epitope_Rep4 981.63350053937 981.63240993586 39.599 2 0.10097654134849318 0.0020200744902468277 0.009276080630246375 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 29789 16998 FVPIKVEQI True PC9_epitope_Rep4 1071.63283183303 1071.6317299358602 73.374 2 0.10097313901762248 0.0020200744902468277 0.009276791469963174 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 76824 11842 NRAQIQAVI True PC9_epitope_Rep1 1011.58252759567 1011.58142993586 50.415 2 0.10096439880521375 0.0020200744902468277 0.00927861777787298 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 65571 14501 LRSDSYVEL True PC9_epitope_Rep1 1080.54513902744 1080.5440499358601 60.604 2 0.10095411309088015 0.0020200744902468277 0.009280767466620859 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 96424 17806 SAAFPGASL True PC9_epitope_Rep2 819.41266830591 819.41211496793 73.783 1 0.10094626804058732 0.0020200744902468277 0.009282407383265976 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 93066 13984 RPNDIMAEV True PC9_epitope_Rep1 1043.50697969691 1043.50588993586 58.628 2 0.10094577714101519 0.0020200744902468277 0.009282510009345088 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 15312 18780 EAFQLFDR True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 77.021 2 0.10093680191457263 0.0020200744902468277 0.009284386536411804 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 35238 13391 GRAPQVLVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 63.179 2 0.10093622288583262 0.0020200744902468277 0.009284507611358125 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 21769 16183 ERVPINDVL True PC9_epitope_Rep1 1053.58185888933 1053.5807699358602 67.062 2 0.10093410183156401 0.0020200744902468277 0.009284951136854767 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 78648 21238 NYTLYPITF True PC9_epitope_Rep4 1130.56481184286 1130.56370993586 89.857 2 0.10092863853291387 0.0020200744902468277 0.009286093639654653 ['nc|ENSG00000151233|Q4G148-2|GXYLT1', 'ENSG00000151233|ENST00000398675|GXYLT1'] 125057 9423 VIDQQNGLY True H1975_Epitope_Rep3 1048.5189242795998 1048.5178299358602 41.247 2 0.10092810699687091 0.0020200744902468277 0.009286204803388569 ['ENSG00000132383|ENST00000254719|RPA1'] 35806 11031 GTITDDVRV True PC9_epitope_Rep4 974.50327421546 974.50216993586 50.207 2 0.10092566735716449 0.0020200744902468277 0.009286715038117425 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 137874 11291 YETLTITQA True H1975_Epitope_Rep1 1038.5233409536997 1038.5222499358601 48.408 2 0.10091769935110848 0.0020200744902468277 0.009288381681646416 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 10 4834 AAAAAAAAAAA True PC9_epitope_Rep6 799.41881631551 799.41770993586 26.101 2 0.10091405692911092 0.0020200744902468277 0.009289143651342197 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 135153 15757 WELLPSAAA True H1975_Epitope_Rep2 956.4967322830398 956.49618496793 65.784 1 0.10091310033441861 0.0020200744902468277 0.009289343774314375 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'ENST00000487089.1_1_6:31603319-31603595:+|nuORF', 'ENST00000487839.1_1_6:31603188-31603595:+|nuORF'] 54576 15177 KYITDWQNVF True NCI_RA007_Epitope_Rep5 1312.6451874218799 1312.6440899358602 65.062 2 0.10090868823640443 0.0020200744902468277 0.009290266854166711 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 46800 7173 ITGPPEAQFK True H1975_Epitope_Rep1 1086.57095985246 1086.5698699358602 32.612 2 0.10090811985317895 0.0020200744902468277 0.009290385775206229 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'chr17:49045065-49045890|224|19.3|0.56|5.1|+|0|IGF2BP1,IGF2BP1|1', 'ENSG00000136231|ENST00000258729|IGF2BP3', 'nc|ENSG00000136231|O00425-2|IGF2BP3', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 103681 6659 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 30.418 2 0.10090783229447452 0.0020200744902468277 0.009290445940767346 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 47689 12689 IYAGGIKSI True PC9_epitope_Rep1 920.53311779176 920.53202993586 53.679 2 0.10090447660476545 0.0020200744902468277 0.009291148075264327 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4'] 25396 16237 FEDDEFVVY True H1975_Epitope_Rep2 1161.4866210918099 1161.48552993586 67.665 2 0.10090211314107804 0.0020200744902468277 0.009291642629849502 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 97571 7777 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43308993586 34.868 2 0.10089540086751334 0.0020200744902468277 0.009293047310013626 ['nc|ENSG00000128951|P33316-2|DUT'] 28019 17962 FQNPFRSEL True PC9_epitope_Rep4 1136.56145779792 1136.56036993586 77.145 2 0.10089009374951545 0.0020200744902468277 0.009294158076665072 ['ENSG00000073050|ENST00000262887|XRCC1'] 48870 8945 KEAIETIVAA True H1975_Epitope_Rep1 1043.5862755634298 1043.5857749679299 39.311 1 0.10088378360010805 0.0020200744902468277 0.009295478940759012 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 135078 6083 WEDEGVRA True H1975_Epitope_Rep2 960.4301092751998 960.42900993586 28.373 2 0.10087950339969962 0.0020200744902468277 0.009296374990647598 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 30167 11744 FYQEHPDL True PC9_epitope_Rep1 1047.4661604307498 1047.4650699358601 50.047 2 0.1008748998277344 0.0020200744902468277 0.009297338829934285 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 138534 14894 YHVNFSQAI True PC9_epitope_Rep4 1077.52434401321 1077.5232499358601 65.23 2 0.10087474469597332 0.0020200744902468277 0.00929737131118133 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF'] 104166 17349 SQFNKEILL True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 71.545 2 0.10087430450698019 0.0020200744902468277 0.009297463477860242 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 21409 17444 ERINNINIL True PC9_epitope_Rep3 1097.61930702721 1097.61820993586 72.273 2 0.10086137540912062 0.0020200744902468277 0.009300170959931813 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 73007 13833 MRAFADAL True PC9_epitope_Rep4 893.4429228883698 893.44182993586 61.106 2 0.10085950834094974 0.0020200744902468277 0.009300562005013143 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 72264 12394 MHSIGGVQV True PC9_epitope_Rep1 926.4643866089399 926.46328993586 52.534 2 0.10085950668382768 0.0020200744902468277 0.009300562352093391 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 106166 7338 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4548899358601 33.202 2 0.10085922029260867 0.0020200744902468277 0.009300622336235197 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 137086 19765 YAQGLLTGV True PC9_epitope_Rep5 920.4967322830399 920.49618496793 81.069 1 0.10085542510134671 0.0020200744902468277 0.00930141726741561 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 103892 16117 SQADVIPAV True PC9_epitope_Rep4 898.4759968384599 898.47488993586 69.934 2 0.10085309777102355 0.0020200744902468277 0.009301904776331022 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 6389 2535 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 14.684 2 0.10085136210736516 0.0020200744902468277 0.009302268363986845 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 34999 6317 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 29.696 2 0.1008502688095166 0.0020200744902468277 0.009302497395530516 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 24670 20970 FALPGLLHA True PC9_epitope_Rep1 937.5385375253701 937.53744993586 85.486 2 0.10084736072010275 0.0020200744902468277 0.00930310662836177 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 112389 22406 TLATDILM[Oxidation]GV True PC9_epitope_Rep1 1048.547447907 1048.54634993586 91.004 2 0.10083644631848475 0.0020200744902468277 0.00930539349163482 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 132202 17593 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 72.464 2 0.10083240923705286 0.0020200744902468277 0.009306239506099432 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 136987 14359 YAITTLHNL True PC9_epitope_Rep6 1044.5603951687601 1044.55928993586 67.128 2 0.10082031781222442 0.0020200744902468277 0.009308773836775567 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant', 'ENSG00000173801|ENST00000393931|JUP'] 45065 11492 IPHSLPGAVAA True PC9_epitope_Rep4 1031.5763795860698 1031.5752899358602 51.965 2 0.10081912410862343 0.0020200744902468277 0.009309024069732967 ['ENSG00000160113|ENST00000291442|NR2F6'] 100624 22047 SLDDLLTNV True PC9_epitope_Rep2 988.5076908895601 988.50658993586 90.277 2 0.100813909420488 0.0020200744902468277 0.009310117286669865 ['ENSG00000143819|ENST00000272167|EPHX1'] 2094 9890 AELGEAPVP True H1975_Epitope_Rep1 881.4494477374499 881.4488949679301 42.975 1 0.10081096665087314 0.0020200744902468277 0.009310734268634848 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 114365 20289 TPSIPVLTA True PC9_epitope_Rep1 897.51713337445 897.51658496793 82.868 1 0.10080428388987565 0.0020200744902468277 0.009312135523729658 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 88980 9311 QVIKEINQV True PC9_epitope_Rep4 1069.6131590176099 1069.61206993586 43.421 2 0.1007933467061206 0.0020200744902468277 0.009314429290643852 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 26245 17823 FHEGDVITL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 73.35 2 0.10078917279295306 0.0020200744902468277 0.009315304794243228 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 110069 11319 TELMPPPPP True H1975_Epitope_Rep2 977.4892043744499 977.4886549679301 48.587 1 0.10077413996591067 0.0020200744902468277 0.009318458673874291 ['nc|ENSG00000111880|O60942-2|RNGTT', 'ENSG00000111880|ENST00000369485|RNGTT'] 107786 18313 SVTFVAEQV True PC9_epitope_Rep1 978.5022115862997 978.50110993586 75.23 2 0.100770125705118 0.0020200744902468277 0.009319301036737936 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 6918 11736 AQIGSYVHV True PC9_epitope_Rep6 972.50288029264 972.50178993586 56.296 2 0.10076971588897646 0.0020200744902468277 0.009319387037718197 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 139939 19998 YQAPDIDVQL True PC9_epitope_Rep4 1160.57135377528 1160.57077496793 85.055 1 0.10076653830070804 0.0020200744902468277 0.009320053888647158 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 134473 20715 VYPQYVIEY True PC9_epitope_Rep3 1172.57537652656 1172.5748749679299 84.954 1 0.1007618945973027 0.0020200744902468277 0.009321028501710927 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 17626 13417 EHIPESPYL True PC9_epitope_Rep6 1083.52367530687 1083.52256993586 63.287 2 0.10075560407825651 0.0020200744902468277 0.00932234890144482 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'FLNB|p.P2279L|1|0.08|ENSG00000136068|chr3:58156023-58156023|C/T|missense_variant'] 103720 6915 SPVFTSRSAA True PC9_epitope_Rep3 1021.51925863277 1021.51816993586 31.611 2 0.10075213325603895 0.0020200744902468277 0.009323077514611203 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 47839 14504 IYHDLEQSI True PC9_epitope_Rep3 1116.54513902744 1116.5440499358601 60.909 2 0.10075002895582556 0.0020200744902468277 0.009323519286875477 ['nc|ENSG00000100266|Q9UNF0-2|PACSIN2', 'ENSG00000100266|ENST00000263246|PACSIN2'] 47744 10362 IYEGYALPH True NCI_RA007_Epitope_Rep1 1061.5181960036098 1061.5170899358602 44.29 2 0.10074745780913201 0.0020200744902468277 0.009324059095092596 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ACTBL2|p.A175D|1|0.35|ENSG00000169067|chr5:57482184-57482184|G/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 2487 7311 AEQLTAPPSA True H1975_Epitope_Rep1 983.4923751785899 983.49126993586 33.129 2 0.10074183355013114 0.0020200744902468277 0.009325240003775128 ['ENST00000466510.5_1_22:46711975-46722552:+|nuORF', 'ENST00000479645.1_1_22:46711975-46724816:+|nuORF', 'ENSG00000075218|ENST00000454366|GTSE1'] 21240 13020 ERDPSPWAV True PC9_epitope_Rep4 1055.50360856863 1055.5025099358602 57.977 2 0.10073194782444195 0.0020200744902468277 0.009327316026822373 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 107282 23353 SVLDGLLYV True PC9_epitope_Rep2 977.54334812229 977.54224993586 95.301 2 0.1007228364933438 0.0020200744902468277 0.009329229817250947 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 31251 14837 GDEELDSLIK True PC9_epitope_Rep6 1117.5502839775297 1117.54918993586 69.044 2 0.10071917984939982 0.0020200744902468277 0.009329997983099187 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 4028 19435 AHFPINVVI True PC9_epitope_Rep4 1008.5756513100799 1008.57454993586 82.87 2 0.10071660236761291 0.0020200744902468277 0.009330539481414947 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 6364 4448 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 23.568 2 0.10071651348986742 0.0020200744902468277 0.009330558154110517 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 134788 22094 VYTVVDEMF True PC9_epitope_Rep3 1101.5052483614097 1101.50467496793 90.281 1 0.10071199666881922 0.0020200744902468277 0.009331507158961975 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 31625 13999 GEFGGFGSV True NCI_RA007_Epitope_Rep1 855.3762827971899 855.37573496793 58.48 1 0.10070147384934205 0.0020200744902468277 0.009333718410119875 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 141106 6843 YSQNQQSY True PC9_epitope_Rep1 1016.4199385143199 1016.41884993586 31.127 2 0.10069624783677832 0.0020200744902468277 0.009334816783820397 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 6891 10498 AQIEGGVHGL True PC9_epitope_Rep3 979.50869394907 979.50758993586 45.32 2 0.10069058686997095 0.0020200744902468277 0.009336006713365862 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 1257 15002 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.44834993586 62.856 2 0.10068968109770521 0.0020200744902468277 0.009336197119264138 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 106695 8207 STTQVVGILK True NCI_RA007_Epitope_Rep3 1044.6179100448799 1044.6168099358601 39.415 2 0.10068326921884214 0.0020200744902468277 0.009337545091485093 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 140269 16457 YRAPEVLL True PC9_epitope_Rep1 959.5440168286299 959.54290993586 68.127 2 0.10067506524239593 0.0020200744902468277 0.009339270088927416 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 100500 22351 SLAQYLINV True PC9_epitope_Rep5 1019.5651461960299 1019.5645749679301 90.982 1 0.10067333238239387 0.0020200744902468277 0.0093396344852969 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 119 19829 AAAWPLLL True H1975_Epitope_Rep1 853.5061747679299 853.5056249679301 82.52 1 0.1006642734946274 0.0020200744902468277 0.00934153966505542 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 26248 17129 FHEGDVITL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 71.136 2 0.10066366942370762 0.0020200744902468277 0.009341666720780505 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 91956 5693 RKPDGTVLL True NCI_RA007_Epitope_Rep3 997.59202965021 997.59092993586 29.373 2 0.10066155704482165 0.0020200744902468277 0.009342111035645285 ['ENSG00000066056|ENST00000372476|TIE1', 'TIE1|p.T513Dfs*32|1|0.38|ENSG00000066056|chr1:43312033-43312034|-/A|frameshift_variant'] 67403 7226 LSSPATLNSR True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 32.609 2 0.10065373330108153 0.0020200744902468277 0.009343756847368618 ['CON__P00761'] 8411 14191 ATLSKIIQV True PC9_epitope_Rep6 971.6015317047498 971.60042993586 66.469 2 0.10064669909615775 0.0020200744902468277 0.009345236807774483 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 1457 7600 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40194496793 34.214 1 0.1006439628896446 0.0020200744902468277 0.009345812552124156 ['ENSG00000173545|ENST00000308683|ZNF622'] 44480 22766 ILLDRLLYL True PC9_epitope_Rep3 1130.7063311264599 1130.7052299358602 92.838 2 0.1006413035125032 0.0020200744902468277 0.009346372162809478 ['ENSG00000143303|ENST00000368216|METTL25B'] 24681 20892 FALPGLLHA True PC9_epitope_Rep5 937.5385375253701 937.53744993586 85.415 2 0.10063703857356833 0.0020200744902468277 0.009347269697605187 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 73999 9508 NDEELNKLLGK True NCI_RA007_Epitope_Rep5 1271.6721304457099 1271.67049490379 43.205 3 0.10063371120766428 0.0020200744902468277 0.009347969982204279 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 130889 9663 VTDDIAPGY True H1975_Epitope_Rep2 949.43927697657 949.43872496793 42.15 1 0.1006321143533296 0.0020200744902468277 0.00934830607744504 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 88847 21423 QVAVAGLLTV True PC9_epitope_Rep2 969.58588164061 969.58478993586 87.876 2 0.10063079642691784 0.0020200744902468277 0.009348583474512394 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 76877 11602 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 49.506 2 0.10062790666126022 0.0020200744902468277 0.00934919173978698 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 90213 3893 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 20.096 2 0.1006265808164214 0.0020200744902468277 0.009349470828858895 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 35938 2607 GTSSVIVSR True NCI_RA007_Epitope_Rep3 904.4977949122 904.49668993586 14.727 2 0.1006188456558088 0.0020200744902468277 0.009351099231788252 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 89817 10713 RALTVPEL True H1975_Epitope_Rep2 897.5283667644899 897.52726993586 46.232 2 0.10061483331506432 0.0020200744902468277 0.009351944015107461 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 118914 10337 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47528993586 44.769 2 0.10060342836173641 0.0020200744902468277 0.009354345684333455 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 17366 15540 EHDGSLFQAV True PC9_epitope_Rep2 1101.50908787189 1101.50798993586 65.047 2 0.10059256530118152 0.0020200744902468277 0.009356633790128523 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 68403 15452 LTETEDWLY True H1975_Epitope_Rep1 1168.5288202569598 1168.52827496793 64.707 1 0.10059091440454303 0.0020200744902468277 0.009356981568324464 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 4018 21445 AHFDGLIFV True PC9_epitope_Rep3 1017.5283667644899 1017.52726993586 87.779 2 0.10058930641861447 0.0020200744902468277 0.009357320318838564 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11', 'FBXO11|p.S292F|1|0.25|ENSG00000138081|chr2:47834638-47834638|G/A|missense_variant'] 58089 10284 LEIVNPQAA True H1975_Epitope_Rep2 953.51819600361 953.51708993586 44.565 2 0.10057766055508696 0.0020200744902468277 0.00935977407524057 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 103984 20131 SQATDFGEALV True PC9_epitope_Rep2 1136.5349682665599 1136.5338699358601 82.844 2 0.10057557845021547 0.0020200744902468277 0.009360212834803993 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 121338 4891 VEVEGTVKA True H1975_Epitope_Rep3 930.5022115862998 930.50110993586 23.941 2 0.10057178888756257 0.0020200744902468277 0.009361011455510606 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.W2288C|1|0.56|ENSG00000278540|chr17:37097023-37097023|C/A|missense_variant'] 43839 12603 IHSPVVNEL True PC9_epitope_Rep2 1006.54474510462 1006.54364993586 53.786 2 0.10057072174437098 0.0020200744902468277 0.009361236359366672 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 81368 9318 PLDHLKPLEY True H1975_Epitope_Rep1 1223.65502382959 1223.6533649037901 40.748 3 0.10055353315297462 0.0020200744902468277 0.00936485962294671 ['ENSG00000135763|ENST00000258243|URB2'] 74156 9020 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.50377496793 39.69 1 0.10054292530202606 0.0020200744902468277 0.00936709637131704 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 105736 20926 SSFPRFYFV True PC9_epitope_Rep2 1148.5654805492 1148.5643899358602 85.938 2 0.1005425972684929 0.0020200744902468277 0.009367165547905142 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 34985 20235 GQSELTLLL True PC9_epitope_Rep6 972.54916177872 972.54806993586 90.519 2 0.10054069820251658 0.0020200744902468277 0.009367566037623969 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 1612 6286 AEFGQAESA True H1975_Epitope_Rep3 908.3875757568799 908.3870249679301 29.184 1 0.1005406512834848 0.0020200744902468277 0.009367575932479713 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 71704 7490 MEEEPTHLP True H1975_Epitope_Rep3 1081.4750108622898 1081.47390993586 33.791 2 0.1005370964645405 0.0020200744902468277 0.009368325645003854 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 79255 8850 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 38.882 2 0.10053659102123731 0.0020200744902468277 0.009368432247832136 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 45144 18036 IPNPAQTSVVV True PC9_epitope_Rep3 1123.62372370131 1123.62262993586 74.577 2 0.10053354861670315 0.0020200744902468277 0.009369073944586326 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 38282 4767 HEEPSATVP True H1975_Epitope_Rep3 965.4454249861699 965.44432993586 23.462 2 0.10053312529538573 0.0020200744902468277 0.009369163233849679 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP'] 101347 22073 SLITDLQTI True PC9_epitope_Rep2 1002.5597264624199 1002.55862993586 90.377 2 0.10053268195242528 0.0020200744902468277 0.009369256747061488 ['ENSG00000168014|ENST00000334126|C2CD3'] 31551 9347 GEDYDERVLP True H1975_Epitope_Rep2 1191.54078192299 1191.53968993586 40.914 2 0.1005322880179709 0.0020200744902468277 0.009369339839411444 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 14458 17088 DTEPPPLLVY True H1975_Epitope_Rep1 1142.5859412102598 1142.58537496793 71.155 1 0.10052528482044401 0.0020200744902468277 0.009370817137262904 ['ENSG00000174231|ENST00000304992|PRPF8'] 5252 20904 ALPPVLTTV True PC9_epitope_Rep5 909.55351888317 909.55242993586 85.463 2 0.1005141787154671 0.0020200744902468277 0.009373160385005231 ['ENSG00000155506|ENST00000518297|LARP1'] 10941 6293 DAFPVAGQK True H1975_Epitope_Rep3 931.4763311916298 931.4752299358599 29.211 2 0.10050815278030666 0.0020200744902468277 0.009374432015852268 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 84490 14060 QALLDLHAL True NCI_RA007_Epitope_Rep4 992.5654805492001 992.5649349679301 61.364 1 0.10050189213461602 0.0020200744902468277 0.009375753351705998 ['ENSG00000087086|ENST00000331825|FTL'] 912 5967 ADLSGITK True NCI_RA007_Epitope_Rep1 803.43888305375 803.43778993586 27.258 2 0.10049240338903385 0.0020200744902468277 0.009377756331606459 ['CON__P34955', 'ENSG00000100665|ENST00000557004|SERPINA4'] 11019 8714 DAQSAPLRV True PC9_epitope_Rep4 955.50869394907 955.50758993586 41.016 2 0.10047080866258819 0.0020200744902468277 0.009382316290661465 ['CON__P02754'] 31932 9051 GEMWNNTAA True H1975_Epitope_Rep2 992.4021802752 992.40163496793 39.767 1 0.10047039237995879 0.0020200744902468277 0.009382404214069094 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000446155.1_1_1:45997278-45997635:+|nuORF', 'ENST00000507778.1_1_4:41844266-41844645:-|nuORF', 'nc|ENSG00000124097|B2RPK0|HMGB1P1'] 134375 16734 VYPESFREL True PC9_epitope_Rep1 1138.56587447202 1138.56476993586 69.194 2 0.10047026444636113 0.0020200744902468277 0.009382431235191321 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 53047 9057 KPNEGAIVEV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 42.419 2 0.10046517526602836 0.0020200744902468277 0.009383506192012708 ['ENSG00000004478|ENST00000001008|FKBP4'] 27350 17474 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55805496793 72.505 1 0.10046085170040917 0.0020200744902468277 0.00938441952527833 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 90871 5159 REVDPPM[Oxidation]GP True H1975_Epitope_Rep3 1012.4647809121999 1012.46368993586 24.949 2 0.10045462486690554 0.0020200744902468277 0.009385735064615345 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 21132 6689 ERAPGETAL True PC9_epitope_Rep3 942.4770594676199 942.47596993586 30.753 2 0.10045434170153737 0.0020200744902468277 0.00938579489298677 ['ENSG00000092148|ENST00000399332|HECTD1'] 73690 16950 MYPYIFHVL True NCI_RA007_Epitope_Rep4 1181.59433814933 1181.59324993586 73.456 2 0.1004522533781332 0.0020200744902468277 0.009386236134022865 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 46397 16479 ISSENLLDAVY True H1975_Epitope_Rep2 1222.60813320682 1222.60702993586 68.603 2 0.1004385796674652 0.0020200744902468277 0.00938912573765382 ['ENST00000471788.1_1_2:207651391-207655428:+|nuORF', 'nc|ENSG00000118246|Q9NYY8-2|FASTKD2', 'ENST00000487777.5_1_2:207631381-207653673:+|nuORF', 'ENSG00000118246|ENST00000402774|FASTKD2'] 97604 11139 SEEVTPIAV True H1975_Epitope_Rep2 943.4862271689899 943.4856749679301 47.882 1 0.1004384939033736 0.0020200744902468277 0.009389143864479362 ['ENSG00000205339|ENST00000379719|IPO7'] 109148 16258 TAMDVVYAL True NCI_RA007_Epitope_Rep5 981.4841189940099 981.48302993586 69.291 2 0.10043766465051167 0.0020200744902468277 0.009389319134453795 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 102029 7422 SLQSVAEER True PC9_epitope_Rep3 1017.5090878718898 1017.50798993586 33.556 2 0.10042449028157714 0.002041777917386524 0.009392104074720003 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 74732 7417 NHANGLTL True PC9_epitope_Rep2 838.4297153523801 838.42860993586 33.906 2 0.10042159297972122 0.002041777917386524 0.00939271664369723 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 66092 5139 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6217549037901 24.871 3 0.10042120008778993 0.002041777917386524 0.009392799714758187 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 99397 17964 SHVDLVVMV True PC9_epitope_Rep4 997.52665251233 997.52554993586 77.153 2 0.1004208629083084 0.002041777917386524 0.00939287100682434 ['ENSG00000031698|ENST00000234677|SARS1'] 22453 15931 ETEVSFLDY True H1975_Epitope_Rep2 1101.4866210918099 1101.48552993586 66.478 2 0.1004199050863519 0.002041777917386524 0.00939307352821917 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant'] 73490 23162 MVDGTLLLL True PC9_epitope_Rep3 973.5518046310099 973.55070993586 94.363 2 0.10041780188064278 0.002041777917386524 0.00939351824364545 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 31943 16301 GENPLQVLV True H1975_Epitope_Rep1 967.5338460677499 967.53329496793 68.057 1 0.10041288245882858 0.002041777917386524 0.009394558516726118 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 87532 12948 QQITENPQL True PC9_epitope_Rep1 1069.54038800017 1069.53928993586 54.676 2 0.1004100224911266 0.002041777917386524 0.00939516334324043 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENST00000533705.5_1_9:86284090-86294929:-|nuORF'] 48964 5369 KEERPPELP True H1975_Epitope_Rep2 1093.5767735088898 1093.57566993586 25.692 2 0.10040807611540296 0.002041777917386524 0.009395574984461632 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 106036 9447 SSYSGVTQL True H1975_Epitope_Rep1 940.4501760134401 940.44906993586 41.254 2 0.10039446668519249 0.002041777917386524 0.009398453740741502 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 104815 6909 SRAAEKLYL True PC9_epitope_Rep6 1049.58694426977 1049.58584993586 35.495 2 0.10038571567526064 0.002041777917386524 0.009400305257891475 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 111237 7000 THIVGTEV True PC9_epitope_Rep4 854.4497820906199 854.44868993586 34.172 2 0.10038352782459554 0.002041777917386524 0.009400768212499242 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 95188 9010 RVIEGDVVSA True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 40.008 2 0.10037358337175328 0.002041777917386524 0.009402872758317835 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 109990 11736 TEIIILATR True NCI_RA007_Epitope_Rep2 1028.62299542532 1028.62188993586 50.247 2 0.10036990340170035 0.002041777917386524 0.009403651665148213 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 86066 22538 QHSEIFWLL True PC9_epitope_Rep5 1171.60259433391 1171.6014899358602 91.698 2 0.10036495592780283 0.002041777917386524 0.009404698950667516 ['ENST00000565925.5_1_16:81015450-81030931:-|nuORF', 'ENST00000569187.5_1_16:81015453-81040468:-|nuORF'] 34665 12135 GQDEPLIHV True PC9_epitope_Rep6 1006.5083595958998 1006.50726993586 58.027 2 0.10036179205254585 0.002041777917386524 0.00940536874101359 ['ENSG00000157778|ENST00000288607|PSMG3'] 84878 5753 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 27.155 2 0.10035937839806199 0.002041777917386524 0.009405879740805655 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 76910 14772 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 61.82 2 0.10035913358923906 0.002041777917386524 0.009405931571272962 ['ENSG00000013523|ENST00000251089|ANGEL1'] 46416 3778 ISSPTETER True NCI_RA007_Epitope_Rep2 1018.49310345458 1018.49200993586 19.335 2 0.10035590885981004 0.002041777917386524 0.009406614330487232 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11', 'S100A11|p.K3T|1|0.08|ENSG00000163191|chr1:152033796-152033796|T/G|missense_variant'] 32923 7103 GHYTEGAELVD True H1975_Epitope_Rep3 1189.5251318588498 1189.5240299358602 32.291 2 0.10034905296237336 0.002041777917386524 0.009408066060170668 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 133685 12904 VYAQVARLF True NCI_RA007_Epitope_Rep4 1065.5971150306498 1065.5960099358601 56.724 2 0.10034398598029305 0.002041777917386524 0.00940913912654515 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 8724 21672 AVATDFFTV True PC9_epitope_Rep2 969.48074786573 969.47964993586 88.838 2 0.10033671578964619 0.002041777917386524 0.009410678984736444 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 131043 10661 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.4816749679298 45.964 1 0.10031806229656795 0.002041777917386524 0.0094146309795199 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 133220 11202 VVSPALRAV True PC9_epitope_Rep5 910.5600012459399 910.55890993586 48.077 2 0.10031531532512418 0.002041777917386524 0.009415213096725666 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000196911|ENST00000368564|KPNA5'] 107466 17243 SVLVSVSEV True PC9_epitope_Rep6 917.50696261357 917.50586993586 78.923 2 0.10031397988422407 0.002041777917386524 0.009415496105603764 ['ENSG00000221926|ENST00000649191|TRIM16'] 66378 12039 LSGHLETVIL True H1975_Epitope_Rep1 1080.61791004488 1080.6168099358601 51.319 2 0.10031191648174033 0.002041777917386524 0.009415933401330652 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 140412 21008 YRFLIQNVL True PC9_epitope_Rep2 1164.6655289436399 1164.6644299358602 86.26 2 0.10030864736453421 0.002041777917386524 0.009416626263291573 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000472894.1_1_9:95018893-95021273:-|nuORF'] 142642 20870 YYPAGTQLF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 85.102 2 0.1002957442419781 0.002041777917386524 0.009419361448218786 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1'] 89619 15200 QYQQIISRL True PC9_epitope_Rep4 1147.6349570913499 1147.63386993586 66.39 2 0.10029313912538575 0.002041777917386524 0.009419913769240226 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 133973 8827 VYIPSKTDL True NCI_RA007_Epitope_Rep3 1034.5648118428599 1034.56370993586 41.812 2 0.10028974601751384 0.002041777917386524 0.00942063320186771 ['ENSG00000145912|ENST00000274606|NHP2'] 27961 8822 FQESSVKEL True PC9_epitope_Rep6 1065.5342399905699 1065.5331499358601 43.85 2 0.1002817333282349 0.002041777917386524 0.00942233232210559 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 114668 22129 TQFADMISL True PC9_epitope_Rep5 1024.4899326504399 1024.4888299358602 90.154 2 0.10027982003186851 0.002041777917386524 0.009422738087011495 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 104127 4116 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 22.149 2 0.10026877471209944 0.002041777917386524 0.009425080865023364 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 9324 4589 AVQRTLLEK True NCI_RA007_Epitope_Rep4 1056.6291434349198 1056.6280499358602 24.059 2 0.10026340418817721 0.002041777917386524 0.009426220186484355 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 74262 5394 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.5074749679301 25.784 1 0.10026151576722794 0.002041777917386524 0.009426620833933596 ['ENSG00000167658|ENST00000309311|EEF2'] 71387 18439 LYSEVSHLL True PC9_epitope_Rep2 1059.56006081559 1059.5589699358602 76.258 2 0.10025607050077348 0.002041777917386524 0.009427776193083166 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 138484 14414 YHSDIVQSL True PC9_epitope_Rep3 1060.5189242796 1060.5178299358602 60.547 2 0.10025154836083476 0.002041777917386524 0.00942873578920931 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 33781 20395 GLLAVLRPL True PC9_epitope_Rep3 950.6276868829399 950.62658993586 83.7 2 0.10025073723676069 0.002041777917386524 0.009428907919270348 ['ENSG00000168569|ENST00000307366|TMEM223'] 4016 21511 AHFDGLIFV True PC9_epitope_Rep1 1017.5283667644899 1017.52726993586 87.577 2 0.10024756417498938 0.002041777917386524 0.00942958130916008 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11', 'FBXO11|p.S292F|1|0.25|ENSG00000138081|chr2:47834638-47834638|G/A|missense_variant'] 7929 7290 ATAPPAPAY True NCI_RA007_Epitope_Rep5 857.42831837005 857.4272299358599 34.717 2 0.100241353115802 0.002041777917386524 0.009430899558676433 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 60901 13388 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 56.513 2 0.10023772917820307 0.002041777917386524 0.009431668793009145 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 134571 19692 VYSEVAAYEF True PC9_epitope_Rep4 1176.5339056373998 1176.53280993586 83.866 2 0.10023429598723897 0.002041777917386524 0.009432397593931777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 140046 18437 YQGEVVQIL True PC9_epitope_Rep6 1047.5600608155898 1047.5589699358602 83.561 2 0.10023417371941885 0.002041777917386524 0.009432423550050384 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO'] 138306 9705 YHDHTKIII True PC9_epitope_Rep5 1138.61349337078 1138.6118549037901 42.298 3 0.10023314107195604 0.002041777917386524 0.00943264277251914 ['ENSG00000145632|ENST00000274289|PLK2'] 67920 10386 LTDAIDEY True H1975_Epitope_Rep1 938.4232925592601 938.42274496793 44.898 1 0.10021801570383992 0.002041777917386524 0.009435854321145866 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 128741 6546 VPYGVGKAA True PC9_epitope_Rep3 860.4756029156398 860.4745099358599 30.206 2 0.10021587835894316 0.002041777917386524 0.009436308225016453 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 89258 21821 QVVGLGLVAV True PC9_epitope_Rep5 953.5909670210499 953.5904149679301 88.968 1 0.10021385607081829 0.002041777917386524 0.009436737713736128 ['ENST00000495270.1_1_9:130699601-130700099:-|nuORF', 'ENSG00000136908|ENST00000314392|DPM2'] 106976 8396 SVEGQLEFR True H1975_Epitope_Rep1 1063.52982331647 1063.5287299358602 37.223 2 0.1002075814981641 0.002041777917386524 0.00943807041154292 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 106778 10414 SVADTVARV True PC9_epitope_Rep3 916.4977949121999 916.49668993586 44.996 2 0.10020739110866046 0.002041777917386524 0.009438110852438529 ['ENSG00000145632|ENST00000274289|PLK2'] 30320 8633 GAAKDLPGV True PC9_epitope_Rep5 826.4548674710599 826.45376993586 38.15 2 0.10020402653699015 0.002041777917386524 0.009438825553079877 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 76957 6663 NRDVAKTVL True PC9_epitope_Rep1 1014.5821932424999 1014.58108993586 30.433 2 0.10019639197022133 0.002041777917386524 0.009440447476041726 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000474988.5_1_6:36410818-36454949:+|nuORF', 'nc|ENSG00000112078|Q7Z5Y7-2|KCTD20'] 128925 22627 VQIDGLVVL True PC9_epitope_Rep1 954.5749826037398 954.5744349679301 91.844 1 0.1001811112767027 0.002041777917386524 0.009443694578930954 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF'] 127151 7898 VLTVINQTQK True PC9_epitope_Rep4 1142.66592286646 1142.66482993586 37.808 2 0.10018057670782138 0.002041777917386524 0.00944380819260711 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 27260 21889 FLPSYIIDV True PC9_epitope_Rep4 1065.57464825057 1065.57354993586 92.407 2 0.10017719972544763 0.002041777917386524 0.009444525943966452 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 73015 19438 MRASSFLIV True PC9_epitope_Rep2 1022.5582869937799 1022.55718993586 80.147 2 0.10017463485540043 0.002041777917386524 0.009445071122039943 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 134379 20586 VYPEYVIQY True PC9_epitope_Rep2 1172.57537652656 1172.57426993586 84.616 2 0.10016935906275728 0.002041777917386524 0.00944619261718199 ['ENSG00000059378|ENST00000263549|PARP12'] 47693 10799 IYAIVKEKY True PC9_epitope_Rep1 1125.64339651673 1125.6417449037901 46.425 3 0.10015612117804558 0.002041777917386524 0.00944900720526978 ['ENST00000473576.6_1_13:50235206-50237234:-|nuORF', 'ENSG00000123179|ENST00000242827|EBPL', 'nc|ENSG00000123179|Q9BY08-5|EBPL', 'ENST00000569153.1_1_16:64294558-64295142:-|nuORF'] 129369 17552 VRDPRPWLL True PC9_epitope_Rep1 1150.66111226954 1150.65946490379 72.306 3 0.10015368007293725 0.002041777917386524 0.009449526311263575 ['ENST00000529462.5_1_8:145637924-145638077:-|nuORF', 'ENST00000527148.5_1_8:145635301-145638951:-|nuORF', 'nc|ENSG00000147804|Q6P5W5-2|SLC39A4', 'ENSG00000147804|ENST00000301305|SLC39A4'] 76559 10595 NQKSVLVSV True PC9_epitope_Rep5 972.5603951687599 972.55928993586 45.742 2 0.10015279530426426 0.002041777917386524 0.009449714465868845 ['ENSG00000221926|ENST00000649191|TRIM16'] 96757 18280 SAMTEEAAVAI True PC9_epitope_Rep5 1091.5168756742698 1091.5157699358601 75.327 2 0.10015059087906382 0.002041777917386524 0.009450183273775168 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 84851 10514 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 45.462 1 0.10014366875106737 0.002041777917386524 0.009451655524784374 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 100178 6706 SITTVQIQK True NCI_RA007_Epitope_Rep1 1016.5866099166 1016.58550993586 30.094 2 0.10014079009440228 0.002041777917386524 0.009452267844060855 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 88282 14220 QSEIASMLY True H1975_Epitope_Rep3 1040.48484727 1040.48374993586 60.037 2 0.10013901272957448 0.002041777917386524 0.009452645926419753 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 17458 16491 EHFAALQSL True PC9_epitope_Rep2 1014.51344497634 1014.51234993586 68.674 2 0.10013426394087364 0.002041777917386524 0.009453656163239598 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 114542 15091 TQAPPNVVL True PC9_epitope_Rep4 937.5232813840499 937.52218993586 65.981 2 0.10013249483756188 0.002041777917386524 0.009454032541056123 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 34902 12084 GQMGSFIRL True NCI_RA007_Epitope_Rep3 1007.5222358382299 1007.52112993586 54.651 2 0.1001236467900463 0.002041777917386524 0.009455915183789375 ['ENSG00000119392|ENST00000309971|GLE1'] 96167 13780 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65405490379 60.9 3 0.1001209405997025 0.002041777917386524 0.009456491064894141 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 128308 5998 VPPPPPIAR True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 29.754 2 0.1001204627757949 0.002041777917386524 0.009456592749978152 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 105562 15470 SSDFDPLVY True H1975_Epitope_Rep3 1041.46549172441 1041.46497496793 64.922 1 0.1001161442630078 0.002041777917386524 0.00945751181452184 ['nc|ENSG00000108375|Q68DV7-3|RNF43', 'nc|ENSG00000108375|Q68DV7-2|RNF43', 'ENSG00000108375|ENST00000407977|RNF43', 'nc|ENSG00000108375|Q68DV7-4|RNF43'] 26680 8736 FITAEELR True H1975_Epitope_Rep1 977.5181960036099 977.51708993586 38.531 2 0.10011369297291202 0.002041777917386524 0.009458033535338063 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF'] 111110 10317 THEDPVIAV True PC9_epitope_Rep4 979.49746055903 979.49636993586 47.373 2 0.10011308250647007 0.002041777917386524 0.00945816346836775 ['ENSG00000103148|ENST00000611875|NPRL3'] 2243 9053 AENISSVVA True H1975_Epitope_Rep2 888.4552613938799 888.45471496793 39.776 1 0.10011280913591195 0.002041777917386524 0.009458221653716492 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant'] 74980 12714 NHQGATPLVL True PC9_epitope_Rep1 1048.56654317836 1048.5654499358602 53.776 2 0.10011192705310897 0.002041777917386524 0.00945840940229599 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 99230 7554 SHMEGVASV True PC9_epitope_Rep1 915.4120166829099 915.41090993586 33.874 2 0.10010932596982065 0.002041777917386524 0.009458963055540167 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 2488 7402 AEQLTAPPSA True H1975_Epitope_Rep1 983.4923751785899 983.49126993586 33.476 2 0.1001092538816051 0.002041777917386524 0.009458978400309476 ['ENST00000466510.5_1_22:46711975-46722552:+|nuORF', 'ENST00000479645.1_1_22:46711975-46724816:+|nuORF', 'ENSG00000075218|ENST00000454366|GTSE1'] 70640 26365 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 109.0 3 0.10010510120863231 0.002041777917386524 0.009459862382616854 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 38839 6086 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 28.459 2 0.1001048228154523 0.002041777917386524 0.009459921647188596 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 107767 19273 SVSTQLSLV True PC9_epitope_Rep5 932.51786165044 932.51676993586 79.177 2 0.1001012670739217 0.002041777917386524 0.009460678627648754 ['ENSG00000214194|ENST00000397764|SMIM30'] 38953 10653 HHINDTDTIL True PC9_epitope_Rep5 1177.57275075761 1177.57111490379 45.964 3 0.10009416057793157 0.002041777917386524 0.009462191700541727 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 79254 8700 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 38.304 2 0.10009198174822562 0.002041777917386524 0.009462655650387992 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 2573 8286 [Acetylation]-AEQVALSR True H1975_Epitope_Rep1 914.4821451643598 914.48104993586 36.804 2 0.10009160312830394 0.002041777917386524 0.009462736274169777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 59577 8732 LFVGGIKED True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 41.438 2 0.10009139216450363 0.002041777917386524 0.009462781197340434 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 38964 9237 HHIVSIEV True PC9_epitope_Rep6 932.50796567308 932.50686993586 45.68 2 0.10008016844398075 0.002041777917386524 0.009465171499292411 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 2342 6890 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 31.461 2 0.10007901638679526 0.002041777917386524 0.009465416884183024 ['ENSG00000172301|ENST00000302362|COPRS'] 43926 22975 IIDDTIFNL True PC9_epitope_Rep5 1062.55972646242 1062.5586299358602 93.363 2 0.10006845104609842 0.002041777917386524 0.009467667555461037 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 6899 3629 AQIENSAAVQK True NCI_RA007_Epitope_Rep5 1157.6040508858898 1157.6029499358601 19.933 2 0.10006844831457447 0.002041777917386524 0.009467668137407431 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 75205 12178 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.48374993586 51.861 2 0.10006743401586042 0.002041777917386524 0.00946788423433805 ['ENSG00000116285|ENST00000377482|ERRFI1'] 129214 6734 VQTEVNREL True PC9_epitope_Rep4 1086.56693710118 1086.5658499358601 33.093 2 0.10006449772849713 0.002041777917386524 0.00946850983867227 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 46311 11392 ISQIVSSITAS True H1975_Epitope_Rep1 1104.60265390356 1104.6020749679299 48.798 1 0.1000593947725031 0.002041777917386524 0.009469597166742838 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 134666 9817 VYSRDPNYL True PC9_epitope_Rep2 1125.5454733806098 1125.54436993586 43.097 2 0.10005846092229145 0.002041777917386524 0.009469796162684885 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 96517 11008 SADPNVVDL True H1975_Epitope_Rep1 928.45017601344 928.44906993586 47.303 2 0.10005050921338031 0.002041777917386524 0.009471490769749149 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 105498 5554 SRYSSTETL True PC9_epitope_Rep2 1042.49310345458 1042.49200993586 26.753 2 0.10004994083459842 0.002041777917386524 0.009471611909374579 ['ENSG00000110237|ENST00000263674|ARHGEF17'] 104937 13588 SRDEGSLLL True PC9_epitope_Rep2 988.5189242795999 988.51782993586 57.556 2 0.10004891004811373 0.002041777917386524 0.009471831606594362 ['nc|ENSG00000132128|Q15345-3|LRRC41', 'ENSG00000132128|ENST00000617190|LRRC41'] 34839 18928 GQISEVVVV True PC9_epitope_Rep3 928.5229470308799 928.52239496793 78.029 1 0.1000388297168753 0.002041777917386524 0.009473980340281529 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 72295 11215 MIDPSGVSY True H1975_Epitope_Rep2 967.4320834211501 967.43098993586 48.18 2 0.10003567174633862 0.002041777917386524 0.009474653592431949 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 96972 12339 SAYEFYHAL True NCI_RA007_Epitope_Rep2 1099.49746055903 1099.49636993586 52.601 2 0.10002913485640336 0.002041777917386524 0.009476047346569155 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 104753 12211 SQVPEVTTV True PC9_epitope_Rep6 958.49712620586 958.49602993586 58.334 2 0.10002616999777783 0.002041777917386524 0.009476679559543599 ['ENSG00000196455|ENST00000356763|PIK3R4'] 131060 14275 VTDSGPTFNYL True H1975_Epitope_Rep3 1212.56626839484 1212.56567496793 60.252 1 0.1000215001947592 0.002041777917386524 0.00947767540894354 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 65344 18662 LRDGQILEL True PC9_epitope_Rep3 1055.59750895347 1055.59640993586 77.001 2 0.1000195781737222 0.002041777917386524 0.009478085314736125 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 127588 4743 VNTLIRPDGEK True NCI_RA007_Epitope_Rep5 1240.6775501793197 1240.67590490379 24.927 3 0.1000043706200579 0.002041777917386524 0.009481329199007139 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 46663 13889 ITDQGIEFY True H1975_Epitope_Rep1 1084.5076908895599 1084.50717496793 58.573 1 0.09999777875922562 0.002041777917386524 0.009482735621890486 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF'] 99131 13500 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 57.216 2 0.09999212377759953 0.002041777917386524 0.009483942313627852 ['ENSG00000132646|ENST00000379143|PCNA'] 44294 16393 ILDEAIYKV True PC9_epitope_Rep4 1062.5961119711399 1062.5950099358602 71.017 2 0.09999130955452543 0.002041777917386524 0.009484116069217926 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 16810 6004 EEVSVTVKA True H1975_Epitope_Rep1 960.5127762699999 960.51166993586 28.165 2 0.09998733774970663 0.002041777917386524 0.009484963697911885 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 14986 20679 DYIKFLRSI True PC9_epitope_Rep1 1153.64954452633 1153.64788490379 84.366 3 0.09998706664989437 0.002041777917386524 0.009485021556362693 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 106595 7960 STPLAGLAPK True NCI_RA007_Epitope_Rep3 953.55458151233 953.55348993586 38.415 2 0.09998388371640962 0.002041777917386524 0.009485700887142614 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 88954 16298 QVIAGFNRL True PC9_epitope_Rep3 1016.57671393924 1016.57560993586 67.827 2 0.09998361089083856 0.002041777917386524 0.009485759118237442 ['ENSG00000143256|ENST00000368010|PFDN2'] 108599 21966 SYPDLLPTF True PC9_epitope_Rep4 1051.52261267771 1051.5215099358602 92.705 2 0.09997609213137511 0.002041777917386524 0.009487364034930383 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 15252 12331 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 52.515 2 0.09996876442379027 0.002041777917386524 0.009488928420598567 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 74873 10315 NHHLFTTTI True PC9_epitope_Rep6 1082.5508931142201 1082.5497899358602 50.375 2 0.09996803013945696 0.002041777917386524 0.00948908519589948 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 109707 8384 TEDGDTALHLA True H1975_Epitope_Rep2 1141.52513185885 1141.5240299358602 37.202 2 0.0999671680714435 0.002041777917386524 0.009489269257152204 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB'] 4254 8001 AIDTIINQK True NCI_RA007_Epitope_Rep1 1014.5709598524599 1014.56986993586 35.116 2 0.09996687541149168 0.002041777917386524 0.009489331744132313 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 6148 11403 APM[Oxidation]PPIIHA True PC9_epitope_Rep3 961.50552352537 961.50442993586 48.864 2 0.09996589258208473 0.002041777917386524 0.00948954159479445 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 139122 21156 YLDPSVLSGV True PC9_epitope_Rep2 1048.54407639828 1048.5429699358601 86.83 2 0.09996532905554045 0.002041777917386524 0.009489661919222823 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 96520 11228 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44962496793 48.23 1 0.09996496548076306 0.002041777917386524 0.009489739550639146 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 88137 6086 QRSGNVAEL True PC9_epitope_Rep5 972.4988575413598 972.49776993586 28.399 2 0.09996222082722937 0.002041777917386524 0.009490325615686095 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 37419 17954 GVTEVLHGL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 73.851 2 0.09996126907924553 0.002041777917386524 0.009490528850232972 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion'] 118417 13661 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47054993586 60.438 2 0.09995846597549213 0.002041777917386524 0.009491127444139295 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 62074 7200 LLDVRDRDSY True H1975_Epitope_Rep1 1250.62551460646 1250.62387490379 32.707 3 0.09994327392065455 0.002041777917386524 0.009494372287590614 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 106779 9097 SVADTVARV True PC9_epitope_Rep4 916.4977949121999 916.49668993586 42.577 2 0.09992876301590328 0.002041777917386524 0.009497472636339786 ['ENSG00000145632|ENST00000274289|PLK2'] 45715 17085 IRPENVIIY True PC9_epitope_Rep5 1115.6338944621898 1115.63278993586 70.739 2 0.09992708369101029 0.002041777917386524 0.009497831497495335 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 74943 19545 NHLREIWEL True PC9_epitope_Rep1 1208.6302060640799 1208.62855490379 80.003 3 0.09991686133863559 0.002041777917386524 0.00950001622964052 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'ENST00000555791.5_1_15:91527220-91537794:-|nuORF'] 33591 19001 GLFIIDDK True PC9_epitope_Rep3 919.5014833103099 919.50038993586 78.308 2 0.09991371199328898 0.002041777917386524 0.009500689407977264 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 98913 16936 SHADVVNLL True PC9_epitope_Rep1 966.51344497634 966.51234993586 69.967 2 0.09990785938559385 0.002041777917386524 0.009501940534787968 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 28876 17521 FTDEEVDELYR True PC9_epitope_Rep1 1414.6252398229399 1414.62414993586 72.189 2 0.09990161884435426 0.002041777917386524 0.00950327476475932 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 96329 12274 RYSSMAASF True PC9_epitope_Rep1 1018.4542158480599 1018.45310993586 52.068 2 0.0998881328685749 0.002041777917386524 0.009506158683387285 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 96538 21631 SADTTILFV True PC9_epitope_Rep2 965.50696261357 965.50586993586 88.679 2 0.09988804984587123 0.002041777917386524 0.009506176440032243 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 65956 15994 LSDTSVIQFY True H1975_Epitope_Rep2 1171.57610480255 1171.5750099358602 66.719 2 0.09988373718115248 0.002041777917386524 0.009507098863359318 ['ENSG00000103544|ENST00000417362|VPS35L'] 96305 9045 RYSEYAEEF True NCI_RA007_Epitope_Rep4 1192.5036681382796 1192.50256993586 41.623 2 0.09987931405445473 0.002041777917386524 0.009508045002014014 ['ENSG00000139505|ENST00000381801|MTMR6'] 109900 11665 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 49.941 1 0.09987271755278192 0.002041777917386524 0.009509456208555976 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 114875 22353 TQRGALFLLF True PC9_epitope_Rep3 1164.6655289436399 1164.6644299358602 91.263 2 0.09986554585349382 0.002041777917386524 0.009510990695921429 ['ENST00000481988.1_1_X:99901319-99905990:+|nuORF', 'ENSG00000102359|ENST00000373004|SRPX2'] 133480 13049 VWDTAGQEKF True PC9_epitope_Rep2 1179.5560380643099 1179.5549499358601 55.472 2 0.0998635030789657 0.002041777917386524 0.009511427820010077 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000537745.5_1_12:131357552-131357684:+|nuORF'] 36688 23416 GVISGLFEL True PC9_epitope_Rep1 933.5171333744499 933.51658496793 94.854 1 0.09986313472289789 0.002041777917386524 0.009511506644905259 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 85830 12449 QHEEFVTSL True PC9_epitope_Rep6 1088.51383889916 1088.51274993586 59.313 2 0.09985127635257511 0.002041777917386524 0.009514044563689424 ['ENSG00000085872|ENST00000546361|CHERP'] 118332 11992 TYMKDLYQL True NCI_RA007_Epitope_Rep3 1173.5739966275698 1173.57288993586 54.296 2 0.09984904002087885 0.002041777917386524 0.009514523254173728 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 78575 21334 NYQVQFVTL True PC9_epitope_Rep2 1110.57095985246 1110.5698699358602 87.526 2 0.09984827244899445 0.002041777917386524 0.009514687559510814 ['ENSG00000125484|ENST00000372146|GTF3C4'] 43802 19090 IHSDVVFVV True PC9_epitope_Rep1 1013.55458151233 1013.55348993586 78.22 2 0.0998473344129266 0.002041777917386524 0.009514888357851676 ['ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF', 'ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1'] 25460 7054 FEELDRPAA True H1975_Epitope_Rep1 1046.50327421546 1046.5021699358601 32.165 2 0.09984413934915007 0.002041777917386524 0.009515572331591426 ['ENSG00000150990|ENST00000308736|DHX37'] 100630 20178 SLDDLLTNV True PC9_epitope_Rep6 988.5076908895601 988.50658993586 90.287 2 0.09984333669236102 0.002041777917386524 0.009515744165338558 ['ENSG00000143819|ENST00000272167|EPHX1'] 129180 17234 VQSGLRILL True PC9_epitope_Rep6 997.6284151589299 997.62730993586 78.889 2 0.09984300163442959 0.002041777917386524 0.009515815895828419 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 77203 10450 NRSNTVVIM True PC9_epitope_Rep5 1032.53861417836 1032.53750993586 45.182 2 0.09983681683333162 0.002041777917386524 0.009517140054710747 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 21273 9165 ERDSTEVEI True PC9_epitope_Rep5 1076.49858275784 1076.4974899358601 40.2 2 0.09983347380645781 0.002041777917386524 0.009517855866341197 ['nc|ENSG00000116641|Q96N67-7|DOCK7', 'nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 32749 8598 GHASVVNTL True PC9_epitope_Rep1 896.47158016436 896.47048993586 37.908 2 0.09983250723209044 0.002041777917386524 0.009518062839627067 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 78668 20483 NYVQAVEEF True PC9_epitope_Rep1 1097.5029398622898 1097.50184993586 83.6 2 0.0998291278699011 0.002041777917386524 0.009518786498795827 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 111896 15477 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 64.683 2 0.09982859260384318 0.002041777917386524 0.009518901125901189 ['ENSG00000213719|ENST00000375784|CLIC1'] 45335 9876 IQDDAVHTL True PC9_epitope_Rep1 1010.50327421546 1010.50216993586 42.846 2 0.09982470562751955 0.002041777917386524 0.009519733560609884 ['ENSG00000115816|ENST00000234170|CEBPZ'] 91518 15924 RIADQFLGA True PC9_epitope_Rep3 989.5294293936499 989.52832993586 66.399 2 0.09981908437543364 0.002041777917386524 0.009520937530916073 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 121696 11669 VFLENVIR True H1975_Epitope_Rep1 988.5705659296399 988.56946993586 49.874 2 0.09981855220463684 0.002041777917386524 0.009521051519801106 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 39178 6046 HIDVGGHM[Oxidation]Y True H1975_Epitope_Rep3 1043.44946520123 1043.44836993586 28.269 2 0.09981651102916231 0.002041777917386524 0.009521488743639832 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15'] 13967 6741 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 31.337 2 0.09981372946356408 0.002041777917386524 0.009522084591429837 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 61297 10213 LIQDRVAEV True PC9_epitope_Rep4 1041.5818588893299 1041.5807699358602 46.961 2 0.0998123458750007 0.002041777917386524 0.0095223809875075 ['ENSG00000196878|ENST00000356082|LAMB3'] 110789 14091 TGISDVFAK True PC9_epitope_Rep2 936.4916469026 936.49054993586 59.474 2 0.09981095295624583 0.002041777917386524 0.009522679391237953 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 142648 15146 YYPAKIEAI True PC9_epitope_Rep5 1066.5698972233 1066.5688099358601 63.266 2 0.09979345828778942 0.002041777917386524 0.00952642802001087 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 7968 13177 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.47037496793 55.81 1 0.09978910814161043 0.002065145968271848 0.009527360356400883 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 6640 18954 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 78.13 2 0.09978611499678848 0.002065145968271848 0.009528001906868274 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 134457 11639 VYPPPHQVF True PC9_epitope_Rep4 1082.5549158654999 1082.55380993586 52.525 2 0.09977463576003551 0.002065145968271848 0.009530462748860137 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 1214 7947 AEDDLNTVAA True H1975_Epitope_Rep1 1017.46146897313 1017.4608749679301 35.517 1 0.0997688911717009 0.002065145968271848 0.009531694463494026 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 38757 4840 HGRAEIEAL True NCI_RA007_Epitope_Rep3 994.5195929859399 994.51848993586 26.021 2 0.09976365140941724 0.002065145968271848 0.009532818069610429 ['ENSG00000129250|ENST00000320785|KIF1C'] 65897 10463 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 45.263 1 0.09975008583684575 0.002065145968271848 0.009535727637539751 ['ENSG00000182108|ENST00000331808|DEXI'] 198 20291 AAFDGGFTV True PC9_epitope_Rep2 883.4075829254699 883.40703496793 83.471 1 0.09972423715944595 0.002065145968271848 0.009541274058703033 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 100733 11102 SLDVGGPLRY True H1975_Epitope_Rep2 1075.56620882519 1075.5651099358602 47.738 2 0.09971852347404285 0.002065145968271848 0.009542500476065849 ['ENSG00000176894|ENST00000317479|PXMP2'] 78028 5148 NVSDAVAQSTR True NCI_RA007_Epitope_Rep1 1146.5629143499002 1146.56125490379 24.108 3 0.0997136909850559 0.002065145968271848 0.009543537866185565 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 33271 7958 GKIVVQTEL True NCI_RA007_Epitope_Rep3 985.58079626017 985.57968993586 38.407 2 0.0997086031547236 0.002065145968271848 0.009544630186973449 ['ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 106508 10109 STLPAITLK True NCI_RA007_Epitope_Rep5 942.5749826037401 942.57388993586 45.519 2 0.09970642678130588 0.002065145968271848 0.00954509747529437 ['ENSG00000117984|ENST00000236671|CTSD'] 107379 14106 SVLKSIQEV True PC9_epitope_Rep5 1001.57571087973 1001.5746099358599 59.269 2 0.09970345072517532 0.002065145968271848 0.009545736498606593 ['ENSG00000039123|ENST00000230640|MTREX'] 21660 16583 ERSDTFINL True PC9_epitope_Rep4 1093.54038800017 1093.53928993586 71.762 2 0.09970109438938414 0.002065145968271848 0.009546242483643878 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 98281 8077 SEVKFAVQA True H1975_Epitope_Rep2 977.5181960036099 977.51708993586 36.016 2 0.09969373168032838 0.002065145968271848 0.009547823671741722 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000479557.1_1_21:47690305-47692506:-|nuORF'] 49022 11543 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 51.049 2 0.0996936604034614 0.002065145968271848 0.009547838980121449 ['ENSG00000197747|ENST00000368811|S100A10'] 106116 11998 STDHIPILY True H1975_Epitope_Rep3 1057.54441075145 1057.54387496793 51.31 1 0.09968792339453546 0.002065145968271848 0.009549071214392768 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 665 10433 AATKILTEL True H1975_Epitope_Rep2 958.5698972233 958.56880993586 45.146 2 0.09968557333856849 0.002065145968271848 0.009549576019500657 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'MAP7D3|p.H864Qfs*2|1|0.07|ENSG00000129680|chrX:136219469-136219470|-/T|frameshift_variant', 'ENSG00000129680|ENST00000316077|MAP7D3'] 105317 11099 SRPENAIIY True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 47.68 2 0.09968265257725957 0.002065145968271848 0.009550203450864587 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 95891 7134 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60802993586 34.117 2 0.09967814893852052 0.002065145968271848 0.009551170989654627 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030'] 73912 16917 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.54258993586 70.318 2 0.09966813177417559 0.002065145968271848 0.009553323362328765 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 88798 6954 QTVAVGVIK True NCI_RA007_Epitope_Rep4 913.5596668927699 913.55856993586 33.375 2 0.0996679066635294 0.002065145968271848 0.009553371736835377 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 40110 8920 HPYFYAPE True H1975_Epitope_Rep1 1022.4497820906199 1022.44868993586 39.215 2 0.09966779139313547 0.002065145968271848 0.009553396507626733 ['CON__P02769', 'ALB|p.R169I|1|0.48|ENSG00000163631|chr4:73409378-73409378|G/T|missense_variant', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 65812 17585 LSDIYIIPPAY True H1975_Epitope_Rep2 1263.67509056783 1263.6739899358602 72.953 2 0.09965170338187658 0.002065145968271848 0.009556854309899113 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 29777 16963 FVPEIFHRI True PC9_epitope_Rep4 1156.6393141958 1156.63765490379 73.239 3 0.09964324790238613 0.002065145968271848 0.009558672129060076 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 6917 11655 AQIGSYVHV True PC9_epitope_Rep6 972.50288029264 972.50178993586 55.958 2 0.0996425601211115 0.002065145968271848 0.009558820007714911 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5', 'DCTN5|p.G111V|1|0.48|ENSG00000166847|chr16:23661265-23661265|G/T|missense_variant', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 134654 17231 VYSQIPAAVKL True PC9_epitope_Rep2 1187.6914093383098 1187.6903099358601 71.54 2 0.09963268525550827 0.002065145968271848 0.009560943426599343 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 31560 10152 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43872496793 44.049 1 0.09963172000939544 0.002065145968271848 0.009561151010264229 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 2671 7427 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 33.513 1 0.09962025291989897 0.002065145968271848 0.00956361742658731 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 38067 11339 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.44900993586 48.935 2 0.09961363761325943 0.002065145968271848 0.00956504056657341 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 75230 14887 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.4888299358602 62.417 2 0.09960932435204592 0.002065145968271848 0.009565968580395897 ['ENSG00000116285|ENST00000377482|ERRFI1'] 32119 13153 GETIFVTAP True NCI_RA007_Epitope_Rep4 933.48074786573 933.4801949679301 57.691 1 0.09960374671148625 0.002065145968271848 0.00956716875768711 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 98344 6223 SEYIHAQVA True H1975_Epitope_Rep3 1016.4927095317598 1016.49160993586 28.949 2 0.09959520407096484 0.002065145968271848 0.009569007212512736 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 111044 18732 THDGGFLSL True PC9_epitope_Rep3 945.45559574705 945.45448993586 77.276 2 0.09959453246573652 0.002065145968271848 0.009569151762458946 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 139983 4144 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 22.268 2 0.09959440797321639 0.002065145968271848 0.00956917855727887 ['ENSG00000146648|ENST00000275493|EGFR'] 107412 20166 SVLNVLHSL True PC9_epitope_Rep2 980.5654805492 980.56438993586 82.981 2 0.0995779377420913 0.002065145968271848 0.009572724116831775 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L'] 74984 12651 NHQGATPLVL True PC9_epitope_Rep5 1048.56654317836 1048.5654499358602 53.665 2 0.09957439497766891 0.002065145968271848 0.009573486934653702 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 17908 11772 EIAEAYLGK True PC9_epitope_Rep1 992.5178616504398 992.51676993586 50.154 2 0.09957272667881023 0.002065145968271848 0.009573846168084585 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 99315 18935 SHSFVVNIL True PC9_epitope_Rep4 1014.5498304850599 1014.54872993586 80.921 2 0.0995684648019119 0.002065145968271848 0.009574763933082028 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 117378 14798 TVPKPDVVVQV True PC9_epitope_Rep2 1179.68632395787 1179.6852299358602 62.184 2 0.0995534916708873 0.002065145968271848 0.009577988957792464 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 23105 6463 EVISDEHGID True NCI_RA007_Epitope_Rep4 1112.4985827578398 1112.4974899358601 31.458 2 0.09954788060364554 0.002065145968271848 0.009579197778868776 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 22883 9510 EVDPDTILK True H1975_Epitope_Rep3 1028.5389910178399 1028.5378899358602 41.586 2 0.09954666892382341 0.002065145968271848 0.009579458836436983 ['ENSG00000100227|ENST00000252115|POLDIP3', 'nc|ENSG00000100227|Q9BY77-2|POLDIP3'] 28062 19580 FQSSAVMAL True PC9_epitope_Rep2 952.4688032830398 952.46770993586 80.696 2 0.099545948065859 0.002065145968271848 0.009579614149197379 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 45606 21314 IQYIPTELDQV True PC9_epitope_Rep3 1317.68163250025 1317.68052993586 87.279 2 0.09954416280351033 0.002065145968271848 0.009579998804024407 ['ENSG00000149100|ENST00000531120|EIF3M'] 54857 21430 KYPENFFLL True PC9_epitope_Rep2 1169.61209638845 1169.61157496793 87.903 1 0.09953829682945643 0.002065145968271848 0.009581262798017251 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 76054 13736 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 57.981 2 0.09953594611076907 0.002065145968271848 0.00958176937319236 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 7713 5127 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep1 990.4618036426001 990.46070993586 24.574 2 0.09952018926817913 0.002065145968271848 0.00958516560246998 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 65113 21850 LQMEQLNGILL True PC9_epitope_Rep4 1270.69550874258 1270.6944099358602 92.248 2 0.09951543735718385 0.002065145968271848 0.009586190055077338 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000504966.2_1_4:145493783-145493942:+|nuORF', 'ENST00000510488.1_1_3:141189685-141190057:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 63455 11388 LLVVTDPR True PC9_epitope_Rep2 911.54401682863 911.54290993586 49.126 2 0.0995075215376863 0.002065145968271848 0.009587896839268884 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000464073.1_1_14:77101591-77101843:-|nuORF', 'ENST00000416648.1_1_3:183605526-183606234:+|nuORF'] 45281 19881 IPVSGITVV True PC9_epitope_Rep5 883.53786881903 883.53676993586 81.525 2 0.09950627963331614 0.002065145968271848 0.009588164641164795 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 84895 10623 QEASEAYLV True H1975_Epitope_Rep3 1008.4763907612797 1008.47587496793 45.932 1 0.09950412950206211 0.002065145968271848 0.009588628308288643 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 31184 17446 GAYSPIVLL True H1975_Epitope_Rep3 931.53786881903 931.5373249679301 72.801 1 0.09950059462217044 0.002065145968271848 0.009589390637462036 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 39071 19471 HHSSVIFIF True PC9_epitope_Rep2 1085.56581490237 1085.56470993586 80.275 2 0.09950030508159291 0.002065145968271848 0.009589453082102966 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 92131 8121 RLDHWIHSY True H1975_Epitope_Rep2 1225.5992402889701 1225.5976049037902 36.186 3 0.09949814850496577 0.002065145968271848 0.009589918198931005 ['ENSG00000161714|ENST00000619929|PLCD3'] 10027 8119 AYRQGHFTY True PC9_epitope_Rep3 1141.53049202281 1141.52884490379 36.206 3 0.09949604763562801 0.002065145968271848 0.009590371321904332 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 104852 7106 SRAPSTYTY True PC9_epitope_Rep3 1044.48762415132 1044.48652993586 32.342 2 0.09949422759702532 0.002065145968271848 0.009590763890854866 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3', 'nc|ENSG00000130363|Q86UC2-2|RSPH3'] 89726 9658 RADDTFEAL True NCI_RA007_Epitope_Rep5 1036.48253877088 1036.4814499358602 43.786 2 0.09949191333725756 0.002065145968271848 0.009591263081867838 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 26336 15345 FHQPDSVIL True PC9_epitope_Rep2 1054.54474510462 1054.54364993586 64.304 2 0.0994835542031221 0.002065145968271848 0.009593066372747549 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 17294 15721 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 65.472 2 0.09946967437186895 0.002065145968271848 0.009596061343054088 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 64772 11030 LQAEVKQVL True PC9_epitope_Rep4 1026.6073453611798 1026.6062499358602 50.203 2 0.0994639594581654 0.002065145968271848 0.009597294758843007 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 107483 6158 SVMRPEQIMK True NCI_RA007_Epitope_Rep5 1217.6260492837698 1217.62441490379 30.365 3 0.09946117014043394 0.002065145968271848 0.00959789681572075 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 17302 13328 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 62.923 2 0.09945569874142185 0.002065145968271848 0.009599077888044729 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 26412 16951 FHYNGTDVSF True PC9_epitope_Rep4 1185.50908787189 1185.50798993586 73.192 2 0.09945441171582378 0.002065145968271848 0.009599355729372424 ['ENSG00000176624|ENST00000406189|MEX3C'] 110073 9555 TELQPALSA True H1975_Epitope_Rep1 928.4865615221598 928.48601496793 41.678 1 0.09944828121241352 0.002065145968271848 0.009600679279616608 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000551842.5_1_12:57881873-57883359:+|nuORF', 'ENST00000553162.5_1_12:57881873-57883795:+|nuORF'] 6729 21979 AQAQEVFFL True PC9_epitope_Rep2 1051.53384606775 1051.53274993586 90.019 2 0.09943874126123373 0.002065145968271848 0.009602739262503528 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 108472 17544 SYLTSASSL True PC9_epitope_Rep5 927.45492704071 927.45382993586 72.49 2 0.09943240058904625 0.002065145968271848 0.009604108651729084 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 59825 10626 LGEYGFQNA True H1975_Epitope_Rep1 997.4505103666099 997.44940993586 45.829 2 0.09942700097174653 0.002065145968271848 0.009605274949376916 ['CON__P02769'] 114676 12108 TQFGGKRPFGV True PC9_epitope_Rep5 1192.63529144452 1192.6336349037902 51.564 3 0.0994249421781276 0.002065145968271848 0.009605719676948513 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 107160 21610 SVIEQIVYV True PC9_epitope_Rep5 1048.580461907 1048.57936993586 88.164 2 0.09940282085432624 0.002065145968271848 0.009610499427687757 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 121858 16784 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 69.707 2 0.09940195826513179 0.002065145968271848 0.00961068585324488 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 120671 10245 VEINENLPA True H1975_Epitope_Rep3 997.5080252427299 997.5074749679301 44.456 1 0.09939688454766636 0.002065145968271848 0.009611782471395635 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 2444 11635 AEQIVPLSA True H1975_Epitope_Rep3 926.5072969667399 926.5067449679301 49.888 1 0.09936811552909014 0.002065145968271848 0.009618002783799448 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 134190 22921 VYLPTAFLL True PC9_epitope_Rep4 1035.60046907559 1035.59936993586 96.385 2 0.0993671016495869 0.002065145968271848 0.009618222070616215 ['nc|ENSG00000177054|Q8IUH4-2|ZDHHC13', 'nc|ENSG00000177054|Q8IUH4-3|ZDHHC13', 'ENST00000525490.5_1_11:19138758-19188042:+|nuORF', 'ENSG00000177054|ENST00000446113|ZDHHC13'] 103670 7043 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 32.491 2 0.09936542029024 0.002065145968271848 0.009618585733773093 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 87570 10253 QQLGKVVQV True PC9_epitope_Rep5 997.5920296502098 997.59092993586 44.425 2 0.0993638667172219 0.002065145968271848 0.009618921769561676 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 97534 8907 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 39.26 1 0.09935318430545852 0.002065145968271848 0.009621232665015089 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 111903 14082 TIPEAFRGV True PC9_epitope_Rep4 988.5341804209198 988.53308993586 62.076 2 0.0993528292653428 0.002065145968271848 0.009621309478935953 ['ENSG00000213719|ENST00000375784|CLIC1'] 11716 15009 DHARLQLQL True PC9_epitope_Rep3 1092.60399131624 1092.60288993586 62.858 2 0.09934652442206961 0.002065145968271848 0.009622673647042163 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 1999 10735 AEIQGVIDA True H1975_Epitope_Rep2 914.4709114580199 914.4703649679301 46.319 1 0.0993410662126444 0.002065145968271848 0.009623854779765045 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 60791 14037 LHSLGSVSL True PC9_epitope_Rep2 911.50763131991 911.50652993586 59.272 2 0.09933341377247981 0.002065145968271848 0.00962551096782553 ['ENSG00000131746|ENST00000254051|TNS4'] 31463 5125 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.39082993586 24.823 2 0.09932991842318135 0.002065145968271848 0.00962626754341671 ['ENSG00000131116|ENST00000300811|ZNF428'] 21237 13760 ERDPSPWAV True PC9_epitope_Rep2 1055.50360856863 1055.5025099358602 58.215 2 0.09932858278868331 0.002065145968271848 0.009626556659280312 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 90792 4440 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 23.446 2 0.09932355669943006 0.002065145968271848 0.009627644697587645 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 54712 16227 KYMDIEFDF True NCI_RA007_Epitope_Rep5 1206.5267120819797 1206.52560993586 69.164 2 0.09932193384519755 0.002065145968271848 0.009627996035112987 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF', 'ENSG00000166866|ENST00000300119|MYO1A'] 128484 5234 VPSLQGEKA True PC9_epitope_Rep6 927.5025459394699 927.50144993586 27.913 2 0.09931880280864004 0.002065145968271848 0.009628673919067158 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 73012 12430 MRAQPSVVL True PC9_epitope_Rep5 999.5535359665099 999.55242993586 52.811 2 0.09930747498468873 0.002065145968271848 0.009631126826717053 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 121800 16750 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.50677496793 69.256 1 0.09930328915666962 0.002065145968271848 0.009632033369905727 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 71362 18842 LYRLKFNEF True PC9_epitope_Rep5 1228.6604435632 1228.65880490379 77.493 3 0.0993031966719805 0.002065145968271848 0.009632053400642725 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 134621 17679 VYSPHVLNL True PC9_epitope_Rep1 1040.5654805492 1040.5643899358602 72.797 2 0.09929335113067418 0.002065145968271848 0.009634186018658342 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 106931 10236 SVDSHFQEV True PC9_epitope_Rep3 1046.4668887067398 1046.4657899358601 44.323 2 0.09929275296277064 0.002065145968271848 0.00963431560085169 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 109110 15418 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.57388993586 71.461 2 0.0992923489551476 0.002065145968271848 0.009634403122695437 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 29424 10811 FVDVAQSTY True H1975_Epitope_Rep2 1028.48147614172 1028.4803699358602 46.614 2 0.09928893121361815 0.002065145968271848 0.009635143552602138 ['ENSG00000187231|ENST00000428443|SESTD1'] 14959 9740 DYFEQYGK True NCI_RA007_Epitope_Rep1 1048.4501760134401 1048.44906993586 41.887 2 0.09927946659243558 0.002065145968271848 0.00963719428078993 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 105234 14640 SRIPFNQAL True PC9_epitope_Rep2 1044.5716285588 1044.5705299358601 61.581 2 0.09926934477872354 0.002065145968271848 0.009639387866569272 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 90240 7434 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6357099358602 33.54 2 0.09926814489380266 0.002065145968271848 0.009639647935647509 ['ENSG00000131558|ENST00000253861|EXOC4'] 31714 12378 GEGLVTITP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 52.699 1 0.09926479275552515 0.002065145968271848 0.009640374530461203 ['DPP3-FKBP2|1|fusion', 'nc|ENSG00000254986|Q9NY33-4|DPP3', 'DPP3-FKBP2|2|fusion', 'ENSG00000254986|ENST00000531863|DPP3'] 49960 21165 KILSELFTV True PC9_epitope_Rep1 1048.61684741572 1048.61574993586 86.244 2 0.09925699976709834 0.002065145968271848 0.009642063906837117 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 1324 17066 AEDSVFVIV True H1975_Epitope_Rep2 977.50696261357 977.50586993586 70.907 2 0.0992543345568933 0.002065145968271848 0.00964264174026545 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 38866 6543 HHDSHSSVIL True PC9_epitope_Rep3 1130.5468703629401 1130.54521490379 30.194 3 0.09925017774858684 0.002065145968271848 0.009643543027109236 ['ENSG00000129315|ENST00000261900|CCNT1'] 4060 13628 AHLDATTVL True PC9_epitope_Rep1 939.5025459394701 939.50144993586 57.276 2 0.09923896503761158 0.002065145968271848 0.009645974589365483 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 98079 15767 SEQYYIIEV True H1975_Epitope_Rep3 1142.54955570154 1142.5484499358602 66.096 2 0.09923446209020116 0.002065145968271848 0.009646951252926505 ['ENSG00000084774|ENST00000264705|CAD'] 134570 20629 VYSEVAAYEF True PC9_epitope_Rep3 1176.5339056373998 1176.53280993586 84.62 2 0.09923118886910613 0.002065145968271848 0.009647661255204169 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 77109 7056 NRMDGTYAC True PC9_epitope_Rep5 1029.4008003762099 1029.39970993586 32.109 2 0.09922607329316933 0.002065145968271848 0.009648770987144343 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 2249 14559 AENPDIFAV True H1975_Epitope_Rep2 974.4709114580199 974.4703649679301 61.158 1 0.09921770220412099 0.002065145968271848 0.009650587207138586 ['ENSG00000139514|ENST00000380752|SLC7A1', 'SLC7A1|p.I171V|1|0.13|ENSG00000139514|chr13:29532842-29532842|T/C|missense_variant'] 35655 7030 GTDSASGMDY True H1975_Epitope_Rep2 1002.3600406797 1002.35947496793 31.967 1 0.09921146082294327 0.002065145968271848 0.00965194157110381 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533897.1_1_11:88027176-88029469:-|nuORF'] 47287 17048 IVDNTTMQL True PC9_epitope_Rep1 1033.51139637101 1033.51028993586 70.401 2 0.09921120592540472 0.002065145968271848 0.009651996887087632 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 74953 16631 NHM[Oxidation]AVAFVL True PC9_epitope_Rep2 1016.5113371818 1016.51022993586 69.216 2 0.09921109029251444 0.002065145968271848 0.00965202198098455 ['ENSG00000164919|ENST00000520468|COX6C'] 41024 18596 HTIDTILTV True PC9_epitope_Rep3 1011.56006081559 1011.55896993586 76.753 2 0.09921003774291101 0.002065145968271848 0.009652250401313156 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 55457 9788 LAFSRPSQL True H1975_Epitope_Rep2 1017.5607295219299 1017.55962993586 42.636 2 0.09920887810782834 0.002065145968271848 0.009652502066909149 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 2044 6699 AEKVEEIVA True H1975_Epitope_Rep2 986.5284263341398 986.5273299358599 30.677 2 0.09920694503877553 0.002065145968271848 0.009652921598147839 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B'] 115235 5000 TREATQAEI True PC9_epitope_Rep3 1017.5090878718897 1017.50798993586 24.324 2 0.09920460132113286 0.002065145968271848 0.00965343027524445 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 6747 4039 AQDEERQASL True PC9_epitope_Rep4 1145.53127986845 1145.53018993586 21.797 2 0.09919968872264728 0.002065145968271848 0.009654496581672277 ['ENSG00000184575|ENST00000332707|XPOT'] 49313 5306 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 25.462 2 0.09919863119965772 0.002065145968271848 0.00965472613755908 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 131048 10884 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.4816749679298 46.893 1 0.0991961237026967 0.002065145968271848 0.009655270459284927 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 43753 17446 IHIITGVAV True PC9_epitope_Rep5 921.5647522732099 921.56364993586 72.105 2 0.09919144824503424 0.002065145968271848 0.009656285475317038 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 89719 9938 RADDTFEAL True NCI_RA007_Epitope_Rep2 1036.48253877088 1036.4814499358602 43.284 2 0.09918877153562196 0.002065145968271848 0.009656866620052803 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 49221 4803 KENPVVVA True NCI_RA007_Epitope_Rep4 854.4861675993399 854.48506993586 24.911 2 0.09918197007368264 0.002065145968271848 0.009658343446917893 ['ENSG00000107372|ENST00000376962|ZFAND5'] 32215 8650 GEYGDSPVP True H1975_Epitope_Rep3 919.3923267841499 919.39177496793 38.268 1 0.09917478312691372 0.002065145968271848 0.00965990421011489 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 71678 5905 M[Oxidation]EDAKVYVA True H1975_Epitope_Rep2 1040.4848476504399 1040.48374993586 27.7 2 0.09917170868995064 0.002065145968271848 0.009660571948070788 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 106324 6013 STFSTNYR True PC9_epitope_Rep4 974.4457593393399 974.44466993586 30.105 2 0.0991701329483028 0.002065145968271848 0.009660914201007575 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 87771 9944 QRDETALQL True PC9_epitope_Rep6 1072.5512870370399 1072.55018993586 48.778 2 0.09916674917637033 0.002065145968271848 0.009661649199411293 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 31771 6923 GEIASFDKA True H1975_Epitope_Rep2 936.4552613938799 936.45416993586 31.55 2 0.09915773694410328 0.002065145968271848 0.009663607031902013 ['ENSG00000034510|ENST00000233143|TMSB10'] 895 5560 ADLDVSGPK True NCI_RA007_Epitope_Rep1 900.4552613938799 900.45416993586 25.696 2 0.0991544791657713 0.002065145968271848 0.009664314850450866 ['ENSG00000124942|ENST00000378024|AHNAK'] 109823 8144 TEEGYVPTA True H1975_Epitope_Rep3 965.4341915961298 965.43364496793 36.303 1 0.0991513916336247 0.002065145968271848 0.009664985725291531 ['ENSG00000060558|ENST00000262958|GNA15'] 141071 10457 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.52184993586 45.285 2 0.09914977065261586 0.002065145968271848 0.00966533795818814 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 11793 18274 DHEGLGISI True PC9_epitope_Rep5 939.4661604307499 939.46506993586 75.304 2 0.09914340950235459 0.002091919570375921 0.009666720330057362 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 108236 23100 SYIDVLPEF True PC9_epitope_Rep1 1081.53317736141 1081.53267496793 93.656 1 0.0991406031713276 0.002091919570375921 0.009667330247293264 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 49041 2748 KEGKPPISV True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 14.603 2 0.09913193795925425 0.002091919570375921 0.009669213743419175 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 119696 15580 VAVPLYDTL True NCI_RA007_Epitope_Rep4 989.54334812229 989.54224993586 67.681 2 0.09913189836930986 0.002091919570375921 0.00966922234961141 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 23663 19166 EYAKTFGYTF True PC9_epitope_Rep5 1225.5655401188499 1225.56444993586 78.759 2 0.09912923214964832 0.002091919570375921 0.009669801958053491 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 2517 6329 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.49668993586 29.336 2 0.0991236325671891 0.002091919570375921 0.009671019357184844 ['ENSG00000146733|ENST00000275605|PSPH'] 39489 4705 HLDQSQKSLY True H1975_Epitope_Rep2 1217.60405088589 1217.6029499358601 23.19 2 0.09911771336120449 0.002091919570375921 0.009672306404583804 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 106040 9634 SSYSGVTQL True H1975_Epitope_Rep3 940.4501760134401 940.44906993586 42.073 2 0.09911635553998921 0.002091919570375921 0.009672601666633755 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 33529 8644 GLDVEDVK True PC9_epitope_Rep2 873.4443623570099 873.44326993586 38.615 2 0.0991143785418332 0.002091919570375921 0.009673031585856914 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 114516 12179 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.47578496793 51.705 1 0.09910845399220167 0.002091919570375921 0.009674320051399949 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 101535 19852 SLLGDDALVQV True PC9_epitope_Rep6 1128.60265390356 1128.60154993586 89.02 2 0.09910769573971169 0.002091919570375921 0.009674484967285684 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 96962 10313 SAYDGKDYI True PC9_epitope_Rep4 1030.46074069714 1030.4596499358602 47.356 2 0.09910552761795186 0.002091919570375921 0.009674956537067967 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 55680 23206 LALFPGVAL True PC9_epitope_Rep2 899.5480395799099 899.54694993586 94.745 2 0.0991052741071137 0.002091919570375921 0.00967501167749556 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 142665 21539 YYPNPPLVL True PC9_epitope_Rep3 1074.57498260374 1074.57388993586 88.146 2 0.09910495179601882 0.002091919570375921 0.00967508178290668 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 97397 7086 SEDVAKIVA True H1975_Epitope_Rep2 930.5022115862998 930.50110993586 32.187 2 0.09909986883324749 0.002091919570375921 0.009676187434848889 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF', 'ENST00000477693.1_1_2:122488402-122494426:-|nuORF', 'ENSG00000155438|ENST00000285814|NIFK'] 36909 21871 GVLPQLSMV True PC9_epitope_Rep1 942.5208388559 942.51974993586 88.94 2 0.09908959635060388 0.002091919570375921 0.00967842228579547 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 43864 13370 IHSSIVSTL True PC9_epitope_Rep5 955.5338460677501 955.53274993586 56.444 2 0.09908237049931803 0.002091919570375921 0.009679994616170083 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 85425 12373 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45471496793 52.623 1 0.09908018373500443 0.002091919570375921 0.009680470499702503 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 138423 15146 YHILGNEM True PC9_epitope_Rep1 975.44840219163 975.44730993586 63.081 2 0.09907990512001029 0.002091919570375921 0.009680531133488369 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 103545 21955 SPSAAWLLGAA True PC9_epitope_Rep1 1042.5447451046198 1042.54364993586 89.268 2 0.09907678936414771 0.002091919570375921 0.009681209226795218 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 138126 21985 YGIENEVFL True PC9_epitope_Rep5 1082.52842633414 1082.52732993586 89.594 2 0.09906964563054983 0.002091919570375921 0.009682764114938623 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 1133 6064 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 28.302 2 0.09906955188462353 0.002091919570375921 0.009682784521041456 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 97579 7953 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 35.539 1 0.09906748116977386 0.002091919570375921 0.00968323527345611 ['nc|ENSG00000128951|P33316-2|DUT'] 31817 9940 GEIPKVLVA True H1975_Epitope_Rep1 924.5644179200399 924.56332993586 43.169 2 0.09905239166614667 0.002091919570375921 0.009686520556377556 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 116251 17300 TTDFIYQLY True H1975_Epitope_Rep1 1162.55464108198 1162.5540749679299 72.004 1 0.09904046778741142 0.002091919570375921 0.00968911737366272 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 14987 20254 DYIKFLRSI True PC9_epitope_Rep2 1153.64954452633 1153.64788490379 83.328 3 0.09903399331214639 0.002091919570375921 0.00969052768256284 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 141628 15005 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.4906099358602 62.962 2 0.09903259654818632 0.002091919570375921 0.009690831959761994 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 74347 7219 NEQGSYVVA True H1975_Epitope_Rep2 965.4454249861698 965.4448749679301 32.702 1 0.09902893965412858 0.002091919570375921 0.009691628636879005 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 7304 17241 ARIPLNPVL True PC9_epitope_Rep2 991.61785047523 991.61674993586 71.579 2 0.09902788282309025 0.002091919570375921 0.00969185888575193 ['ENSG00000185338|ENST00000332029|SOCS1'] 2184 11513 AELWGEQAEA True H1975_Epitope_Rep2 1102.49310345458 1102.49200993586 49.342 2 0.09902784399910038 0.002091919570375921 0.009691867344327403 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 133915 19177 VYIHGGGWAL True PC9_epitope_Rep5 1071.5501648382299 1071.5490699358602 78.801 2 0.09902649383588019 0.002091919570375921 0.00969216150852701 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1'] 6377 5529 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 26.273 2 0.09900379576401763 0.002091919570375921 0.009697108084629326 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 89086 18180 QVPDDLPNV True PC9_epitope_Rep1 995.4923751785899 995.49126993586 74.72 2 0.09900133392132694 0.002091919570375921 0.009697644737412896 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 107285 22627 SVLDGLLYV True PC9_epitope_Rep4 977.54334812229 977.54279496793 95.263 1 0.09899743480786202 0.002091919570375921 0.00969849475641178 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 89502 20412 QYILFPLRF True PC9_epitope_Rep6 1195.67536535135 1195.6742699358601 91.219 2 0.09899590316112823 0.002091919570375921 0.009698828679694087 ['ENSG00000101407|ENST00000373447|TTI1'] 37569 19583 GVVPQLVKL True PC9_epitope_Rep1 951.6117024656298 951.61060993586 80.153 2 0.09899208996654399 0.002091919570375921 0.009699660064322465 ['ENSG00000182481|ENST00000330459|KPNA2'] 132604 20727 VVFEIQGTTV True PC9_epitope_Rep5 1091.58627556343 1091.5851699358602 84.785 2 0.09899028295665066 0.002091919570375921 0.009700054067540409 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 49314 5509 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 26.202 2 0.09898945576748933 0.002091919570375921 0.009700234434241034 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 96848 6510 SASGPLHSV True PC9_epitope_Rep3 853.4293809992101 853.42828993586 30.068 2 0.09898551960493016 0.002091919570375921 0.00970109274937572 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 41313 16716 HVVEILVET True PC9_epitope_Rep5 1037.57571087973 1037.57460993586 69.304 2 0.09898143707066669 0.002091919570375921 0.009701983058831128 ['ENSG00000170779|ENST00000336219|CDCA4'] 90908 11652 REYMGFIQA True NCI_RA007_Epitope_Rep4 1113.5277151414898 1113.52660993586 51.776 2 0.09897762220711721 0.002091919570375921 0.0097028150658555 ['ENSG00000197976|ENST00000313871|AKAP17A', 'nc|ENSG00000292343|Q02040-2|AKAP17A', 'nc|ENSG00000292343|Q02040-3|AKAP17A'] 97954 10509 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.46472993586 45.486 2 0.0989773570099009 0.002091919570375921 0.00970287290687994 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 1076 7843 AEAIKAWTA True H1975_Epitope_Rep2 959.5076313199099 959.50652993586 35.117 2 0.09897469578160491 0.002091919570375921 0.009703453354183 ['ENST00000565493.1_1_20:34638316-34638640:-|nuORF'] 140387 20845 YREDLDFVL True PC9_epitope_Rep5 1168.5764391557198 1168.57534993586 85.23 2 0.0989717842739446 0.002091919570375921 0.009704088428566779 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 32756 10122 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.46030993586 43.808 2 0.09896027037397873 0.002091919570375921 0.00970660029415228 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 15164 7501 EAALSTALSEK True H1975_Epitope_Rep3 1118.58191845898 1118.58082993586 33.834 2 0.09895559104375384 0.002091919570375921 0.009707621311607632 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 17489 7131 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.53465490379 32.436 3 0.09895216866550362 0.002091919570375921 0.009708368130450305 ['ENSG00000162378|ENST00000294353|ZYG11B'] 16387 5759 EEISNLKAA True NCI_RA007_Epitope_Rep4 973.5080252427299 973.50692993586 28.772 2 0.09894522605702438 0.002091919570375921 0.009709883289687828 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 112497 15599 TLDPQTGLFY True H1975_Epitope_Rep1 1153.5655401188499 1153.5649749679299 65.285 1 0.09893944751404654 0.002091919570375921 0.009711144574840585 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 26025 4551 FGGPGTASRPS True NCI_RA007_Epitope_Rep2 1032.49885754136 1032.49776993586 22.331 2 0.09893604058548955 0.002091919570375921 0.009711888280015282 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 134169 12149 VYLPNINKI True NCI_RA007_Epitope_Rep4 1072.62808080576 1072.6269899358601 53.728 2 0.09892943425247039 0.002091919570375921 0.00971333054460474 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 39749 17281 HLVPEVPTV True PC9_epitope_Rep1 989.55458151233 989.55348993586 71.288 2 0.09892731899065822 0.002091919570375921 0.009713792382200897 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 136339 11473 WTDGSTLQY True H1975_Epitope_Rep3 1069.47163973401 1069.4705499358602 49.252 2 0.09892715262232041 0.002091919570375921 0.00971382870727206 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 40831 9671 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 42.18 2 0.09892202179267452 0.002091919570375921 0.009714949042771402 ['ENSG00000146830|ENST00000678049|GIGYF1'] 8398 5922 ATLQNVLRK True NCI_RA007_Epitope_Rep4 1041.6294777880898 1041.62838993586 29.4 2 0.09891225301026783 0.002091919570375921 0.009717082433619672 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant', 'KPNB1|p.V595L|1|0.28|ENSG00000108424|chr17:47674653-47674653|G/C|missense_variant'] 49311 5101 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 24.703 2 0.09889089129600846 0.002091919570375921 0.009721749148625218 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 47406 21487 IVLDRLIEL True PC9_epitope_Rep5 1082.66994561774 1082.6688499358602 87.684 2 0.09888357873638105 0.002091919570375921 0.009723347154308686 ['ENSG00000129083|ENST00000439561|COPB1'] 70836 8660 LYDIDVAK True H1975_Epitope_Rep1 935.49639792987 935.49530993586 38.24 2 0.09887896891014504 0.002091919570375921 0.009724354663585871 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF'] 31585 12445 GEEMPGLSV True H1975_Epitope_Rep1 917.4164333570099 917.4158849679301 52.907 1 0.09884973827993988 0.002091919570375921 0.009730745541089854 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 106882 17022 SVDETLRLVQA True PC9_epitope_Rep2 1229.66156576201 1229.6604699358602 70.725 2 0.09884919975257074 0.002091919570375921 0.009730863320373196 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF', 'ENSG00000123131|ENST00000379341|PRDX4'] 33916 6775 GLQVVAVK True H1975_Epitope_Rep3 812.5119884243599 812.51088993586 31.016 2 0.09883888420538084 0.002091919570375921 0.009733119657616189 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30260216-30260456:-|nuORF', 'ENSG00000083457|ENST00000263087|ITGAE'] 110062 8538 TELISTTA True H1975_Epitope_Rep2 834.43346332014 834.4329149679301 37.796 1 0.09883853601437857 0.002091919570375921 0.009733195826748892 ['ENSG00000113141|ENST00000417647|IK'] 24375 22758 FAADIISVL True PC9_epitope_Rep2 947.53278343859 947.53168993586 93.031 2 0.09883470981605279 0.002091919570375921 0.00973403287098265 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 138135 18288 YGIPAIVKL True PC9_epitope_Rep6 972.60080342876 972.59970993586 82.988 2 0.09883164321788795 0.002091919570375921 0.009734703789755496 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 34905 18578 GQMGSFIRL True PC9_epitope_Rep2 1007.5222358382299 1007.52112993586 76.814 2 0.0988174007199618 0.002091919570375921 0.009737820381741875 ['ENSG00000119392|ENST00000309971|GLE1'] 53235 13720 KQFGNILIL True NCI_RA007_Epitope_Rep3 1044.6331661861998 1044.63206993586 61.289 2 0.09881733206202828 0.002091919570375921 0.009737835408013713 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 71209 14682 LYPEGLAQL True NCI_RA007_Epitope_Rep3 1002.5385970950199 1002.53750993586 65.135 2 0.09881676597817332 0.002091919570375921 0.009737959300292798 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 65890 13562 LSDPAGAIIYT True H1975_Epitope_Rep2 1119.5811901829898 1119.58008993586 57.303 2 0.09881480615637216 0.002091919570375921 0.009738388235639162 ['ENSG00000178921|ENST00000314666|PFAS'] 111319 12234 THMTAIVGM True PC9_epitope_Rep6 959.4568587003499 959.45576993586 58.433 2 0.09881365709019822 0.002091919570375921 0.009738639733784882 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 17243 13351 EHAEALLL True PC9_epitope_Rep6 894.4810822188999 894.47998993586 63.017 2 0.09879507192995202 0.0021205600773380735 0.009742708362641657 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 657 8777 AATGGGIVRV True PC9_epitope_Rep1 899.51886470995 899.51776993586 38.601 2 0.09879296142012034 0.0021205600773380735 0.009743170494211813 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 64041 17167 LPALAGVSA True PC9_epitope_Rep4 797.46470387877 797.4641549679301 74.039 1 0.09877506510070214 0.0021205600773380735 0.009747090035697166 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 6675 21640 APYPGFLSV True PC9_epitope_Rep1 949.49091862661 949.49037496793 88.065 1 0.09877096856142537 0.0021205600773380735 0.009747987446314813 ['ENSG00000160447|ENST00000291906|PKN3'] 105263 21217 SRLEILNVL True PC9_epitope_Rep5 1055.63389446219 1055.63278993586 86.659 2 0.0987696882743004 0.0021205600773380735 0.009748267929303903 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 46954 22973 ITPENLPQILL True PC9_epitope_Rep1 1249.7281887698498 1249.72708993586 93.165 2 0.0987647992288941 0.0021205600773380735 0.009749339083474737 ['ENSG00000015479|ENST00000394805|MATR3'] 72339 23630 M[Oxidation]IPLLLAAL True PC9_epitope_Rep2 969.5932759006099 969.5921699358599 96.364 2 0.09876157268780027 0.0021205600773380735 0.009750046056673747 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 114849 13042 TQNEVAAAL True PC9_epitope_Rep1 915.4661604307498 915.46561496793 55.035 1 0.09875595847652764 0.0021205600773380735 0.00975127631331799 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 131080 14535 VTDTGALYLY True H1975_Epitope_Rep2 1114.55464108198 1114.55354993586 61.066 2 0.09875070184993305 0.0021205600773380735 0.009752428345939989 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 59826 10800 LGEYGFQNA True H1975_Epitope_Rep3 997.4505103666099 997.44940993586 46.621 2 0.09874888550686754 0.0021205600773380735 0.009752826442572965 ['CON__P02769'] 19398 11788 ELLTTMGDR True PC9_epitope_Rep5 1034.5066453437398 1034.50554993586 50.339 2 0.09874608452688792 0.0021205600773380735 0.009753440377237233 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 101315 22967 SLINVGLISV True PC9_epitope_Rep1 1013.6120963884499 1013.6115749679301 93.142 1 0.09874335852591895 0.0021205600773380735 0.009754037913028623 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 8026 3860 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 19.882 2 0.09873847532224966 0.0021205600773380735 0.009755108392223334 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 65286 17570 LQWNGKEFTA True PC9_epitope_Rep5 1192.58767254576 1192.58656993586 72.592 2 0.09873494294783104 0.0021205600773380735 0.00975588281721037 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 6132 14598 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 61.152 2 0.09873106611522081 0.0021205600773380735 0.009756732827567872 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 9726 20918 AYGNVFSAF True PC9_epitope_Rep4 974.4497820906199 974.44923496793 88.62 1 0.09872966303683435 0.0021205600773380735 0.009757040475299308 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 96498 8151 SADETWDSA True NCI_RA007_Epitope_Rep2 980.37231961556 980.37122993586 36.34 2 0.09872893509451718 0.0021205600773380735 0.009757200092130162 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 115611 15419 TRVDPLTL True PC9_epitope_Rep1 913.5232813840499 913.52218993586 64.128 2 0.09872728269247431 0.0021205600773380735 0.009757562425670278 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 99424 15097 SHYTTPMVL True PC9_epitope_Rep5 1047.50591706775 1047.50480993586 63.078 2 0.09871752373997826 0.0021205600773380735 0.009759702600327455 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 141949 19974 YVIDPIKGL True PC9_epitope_Rep1 1016.5906326678798 1016.58952993586 81.656 2 0.09871433451956745 0.0021205600773380735 0.009760402105466415 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 133713 19250 VYDGKFAIF True PC9_epitope_Rep4 1058.54368247546 1058.5425899358602 82.147 2 0.09871154291205941 0.0021205600773380735 0.009761014439803496 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'nc|ENSG00000065361|P21860-2|ERBB3'] 6430 20048 APRTVLLLLSA True PC9_epitope_Rep4 1152.7230438197598 1152.72194993586 85.251 2 0.09870255305175248 0.0021205600773380735 0.009762986599692821 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 26036 6420 FGHGAEDSL True NCI_RA007_Epitope_Rep4 931.40356017419 931.40246993586 31.295 2 0.09868921821237754 0.0021205600773380735 0.009765912644940861 ['ENSG00000173432|ENST00000356524|SAA1'] 64423 19986 LPNLQTVTV True PC9_epitope_Rep2 983.56514619603 983.56404993586 82.278 2 0.09868741850176835 0.0021205600773380735 0.009766307617091718 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 28203 19854 FREELMEAL True PC9_epitope_Rep5 1136.5535955361597 1136.5524899358602 81.418 2 0.09868245846305539 0.0021205600773380735 0.009767396247284257 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 117332 5087 TVNTSLVGK True NCI_RA007_Epitope_Rep4 917.5181960036099 917.51708993586 26.075 2 0.09867319798774461 0.0021205600773380735 0.009769429048331325 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000422788.5_1_3:56595403-56599181:+|nuORF', 'ENST00000469966.1_1_3:56592935-56598176:+|nuORF', 'ENST00000472582.5_1_3:56591255-56599181:+|nuORF', 'nc|ENSG00000180376|A2RUB6-4|CCDC66', 'nc|ENSG00000180376|A2RUB6-2|CCDC66'] 11821 18170 DHFQLSTSL True PC9_epitope_Rep5 1046.5032742154601 1046.5021699358601 74.901 2 0.09867290146658689 0.0021205600773380735 0.009769494145459981 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 109853 9190 TEEPDVHLP True H1975_Epitope_Rep1 1035.48728979815 1035.48618993586 40.257 2 0.09866714052272688 0.0021205600773380735 0.009770758963423576 ['ENSG00000163870|ENST00000355552|TPRA1'] 74927 15287 NHIGEAVIL True PC9_epitope_Rep1 964.5341804209199 964.53308993586 63.623 2 0.0986668364245975 0.0021205600773380735 0.00977082573265874 ['ENST00000357430.7_1_2:223806358-223806715:+|nuORF'] 37933 7109 GYVQSKEMI True NCI_RA007_Epitope_Rep3 1053.5164817514499 1053.5153899358602 35.081 2 0.09866610976181946 0.0021205600773380735 0.009770985283968015 ['ENSG00000108344|ENST00000264639|PSMD3', 'nc|ENSG00000108344|O43242-2|PSMD3', 'ENST00000415039.7_1_17:38140716-38152959:+|nuORF'] 28602 8904 FSHAQTVVL True NCI_RA007_Epitope_Rep2 1000.5341804209199 1000.53308993586 39.261 2 0.09865880960365349 0.0021205600773380735 0.009772588297331429 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 76806 4666 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 24.476 2 0.09865875940215142 0.0021205600773380735 0.009772599321753868 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 105199 7103 SRGPTPPAM True PC9_epitope_Rep3 912.4487365447999 912.44762993586 32.33 2 0.09864987127190708 0.0021205600773380735 0.009774551372971833 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000527764.1_1_1:36622018-36637187:+|nuORF'] 112636 21011 TLFEDSFQQI True PC9_epitope_Rep4 1226.58191845898 1226.58082993586 88.98 2 0.09864676973272613 0.0021205600773380735 0.009775232634642866 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'nc|ENSG00000289720|Q96J02-3|ITCH', 'POFUT1-ITCH|1|fusion', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'ENSG00000123124|ENST00000517970|WWP1', 'nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF'] 115425 19659 TRLPTPVLL True PC9_epitope_Rep3 1008.6331661861999 1008.63206993586 80.854 2 0.09864375332550887 0.0021205600773380735 0.009775895240348465 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 74782 14968 NHDSRLWSL True PC9_epitope_Rep5 1126.55195574338 1126.5503249037902 62.576 3 0.09864126219238707 0.0021205600773380735 0.009776442492915096 ['ENSG00000118898|ENST00000345988|PPL'] 9469 7423 AVVIVDDR True PC9_epitope_Rep2 885.4919812557699 885.49088993586 33.929 2 0.09863970555965614 0.0021205600773380735 0.009776784469125837 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 109757 8919 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.48110993586 39.269 2 0.09863867578449856 0.0021205600773380735 0.009777010706423065 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 43929 10885 IIDENGVHEL True PC9_epitope_Rep6 1137.56660274801 1137.56550993586 52.732 2 0.09863608853547004 0.0021205600773380735 0.009777579136284522 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 136348 14707 WTEMNTIVY True H1975_Epitope_Rep3 1155.52704643515 1155.5259499358601 61.943 2 0.0986288345713001 0.002138871667699938 0.00977917303209243 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 105586 9251 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep1 1071.45427579815 1071.45377496793 40.495 1 0.09862830780253115 0.002138871667699938 0.00977928878737143 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 44140 6764 IISAPSAD True H1975_Epitope_Rep3 772.3966838886 772.39613496793 30.972 1 0.0986180310351046 0.002138871667699938 0.009781547326767843 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 85255 15573 QEQGDAPAILF True H1975_Epitope_Rep2 1187.5822528121496 1187.5811499358601 65.058 2 0.09861662238055185 0.002138871667699938 0.009781856947553777 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 35716 9240 GTFLEGVAK True NCI_RA007_Epitope_Rep2 920.4967322830398 920.49562993586 40.552 2 0.09860616803168296 0.002138871667699938 0.00978415509498314 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 29539 8228 FVHPGAATV True PC9_epitope_Rep2 897.4708518883699 897.46974993586 37.007 2 0.09860194218764845 0.002138871667699938 0.009785084195669501 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 28516 9557 FSEEGAVGY True H1975_Epitope_Rep2 957.4079768482898 957.4074249679301 41.735 1 0.09859626037989418 0.002138871667699938 0.009786333539648156 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 133125 20920 VVQPLLVSV True PC9_epitope_Rep2 952.5957180483199 952.59516496793 85.915 1 0.09859609168370566 0.002138871667699938 0.009786370635729041 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 115347 20613 TRIGVMSLI True PC9_epitope_Rep3 988.5739370579199 988.57282993586 84.557 2 0.09859481584556849 0.002138871667699938 0.009786651195289096 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 103724 6845 SPVFTSRSAA True PC9_epitope_Rep5 1021.51925863277 1021.51816993586 31.3 2 0.09858415444203363 0.002138871667699938 0.009788995961293272 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 104160 8634 SQFGTEHVL True NCI_RA007_Epitope_Rep4 1016.4927095317599 1016.49160993586 39.994 2 0.09858375852519016 0.002138871667699938 0.009789083045748076 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 134824 14176 VYTYIQSRF True PC9_epitope_Rep6 1175.5975089534697 1175.59640993586 66.404 2 0.09858200672870501 0.002138871667699938 0.009789468373526808 ['DYRK2|p.A390*|1|0.05|ENSG00000127334|chr12:67658074-67658075|-/TA|frameshift_variant', 'DYRK2|p.P391Efs*19|1|0.04|ENSG00000127334|chr12:67658076-67658077|-/CGAGGTTTGTAGAGGT|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 113893 5735 TNQELQEINR True NCI_RA007_Epitope_Rep5 1243.61567819875 1243.61458993586 28.747 2 0.09858005617831465 0.002138871667699938 0.009789897436558673 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 136841 14752 YADGESFLGY True H1975_Epitope_Rep3 1120.4713053808398 1120.4707749679299 62.121 1 0.09857889563028055 0.002138871667699938 0.009790152731107865 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 115454 6575 TRM[Oxidation]STVSEL True PC9_epitope_Rep5 1038.5015603437398 1038.50046993586 30.261 2 0.09857781745413183 0.002138871667699938 0.00979038991138688 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 4054 4552 AHISGATSV True PC9_epitope_Rep1 841.4293809992101 841.42828993586 22.388 2 0.09857388932922559 0.002138871667699938 0.009791254077985114 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 103842 7816 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 35.433 2 0.09857104216571413 0.002138871667699938 0.00979188048436388 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 98045 8835 SEQLDQPISA True H1975_Epitope_Rep2 1086.51931820242 1086.51822993586 38.951 2 0.09856580571763389 0.002138871667699938 0.009793032658804279 ['KDM5A-RAE1|1|fusion', 'ENST00000462438.1_1_20:55948707-55953152:+|nuORF', 'ENSG00000101146|ENST00000395841|RAE1'] 71523 19635 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep3 1000.5415746809199 1000.5410749679301 82.253 1 0.0985605203671659 0.002138871667699938 0.009794195724535952 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 110909 6555 TGVPDRFTGSG True NCI_RA007_Epitope_Rep5 1092.51998690876 1092.5188899358602 31.875 2 0.09854107262391514 0.002138871667699938 0.009798476426046438 ['CON__Q05B55'] 116321 15259 TTEETLTMLY True H1975_Epitope_Rep2 1200.5584061330799 1200.55730993586 63.851 2 0.09854000230163942 0.002138871667699938 0.009798712069788655 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 33967 7894 GLSQSALPYR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 37.057 2 0.09853999138221023 0.002138871667699938 0.00979871447385429 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 9029 11814 AVHDSFVAV True PC9_epitope_Rep2 943.4763311916299 943.4752299358599 50.773 2 0.09853075501575925 0.002138871667699938 0.009800748191392412 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 13846 7960 DQNIFVQK True NCI_RA007_Epitope_Rep1 990.5134449763399 990.51234993586 34.956 2 0.09851892541019407 0.002138871667699938 0.009803353492412487 ['ENSG00000106605|ENST00000265523|BLVRA'] 107089 12268 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 52.045 2 0.09851493280484828 0.002138871667699938 0.009804232955786193 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 6119 14222 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 59.973 2 0.09851000427472563 0.002138871667699938 0.009805318682089724 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 103027 20279 SPFQFTVGP True PC9_epitope_Rep4 978.4810822188999 978.48053496793 86.145 1 0.09850443271056716 0.002138871667699938 0.009806546203308163 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 20053 14875 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.4841499358602 62.369 2 0.09849448181009773 0.002138871667699938 0.009808738940508054 ['ENSG00000182195|ENST00000370526|LDOC1'] 34867 21196 GQLDFSEFL True PC9_epitope_Rep6 1054.49712620586 1054.49657496793 94.378 1 0.09849251497319797 0.002138871667699938 0.009809172399564078 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 97851 12053 SELPGAFEA True NCI_RA007_Epitope_Rep5 919.4287122928699 919.42760993586 53.02 2 0.09848558457701549 0.002138871667699938 0.009810699892650394 ['ENSG00000126247|ENST00000246533|CAPNS1'] 98982 20011 SHDEVFVVL True PC9_epitope_Rep3 1043.52876068731 1043.52766993586 82.22 2 0.09848388021305297 0.002138871667699938 0.009811075577574442 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 36140 19497 GVAPGFQVV True PC9_epitope_Rep3 872.4756029156399 872.4745099358599 80.227 2 0.0984769902664497 0.002138871667699938 0.009812594436109923 ['ENSG00000165724|ENST00000298585|ZMYND19'] 21372 9730 ERHPQTIVL True PC9_epitope_Rep3 1091.60874234351 1091.60764993586 42.38 2 0.09847065632790036 0.002138871667699938 0.00981399092321893 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 32204 7787 GEYDHLPEQA True H1975_Epitope_Rep2 1157.4989171110099 1157.4978299358602 34.899 2 0.09846953770677594 0.002138871667699938 0.00981423757305196 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 117988 6358 TYDNVHQQF True NCI_RA007_Epitope_Rep3 1150.5043368446202 1150.5032299358602 32.012 2 0.09846809481240812 0.002138871667699938 0.00981455573210292 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 7230 9527 ARDDTLITA True PC9_epitope_Rep1 974.50327421546 974.50216993586 41.503 2 0.0984623421591929 0.002138871667699938 0.009815824293423543 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 26861 14642 FLDDSTALY True H1975_Epitope_Rep3 1043.48114178855 1043.48057496793 61.687 1 0.09846055338543878 0.002138871667699938 0.00981621878144664 ['ENSG00000100558|ENST00000216446|PLEK2'] 810 9652 AAYYHPSYL True H1975_Epitope_Rep2 1083.5025459394699 1083.50197496793 42.107 1 0.09845635538807512 0.002138871667699938 0.009817144648145117 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 69271 22914 LTTLELLEV True PC9_epitope_Rep1 1029.5957776179698 1029.59527496793 92.937 1 0.0984529278780445 0.002138871667699938 0.00981790064600384 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 21373 7483 ERHPQTIVL True PC9_epitope_Rep4 1091.60874234351 1091.60764993586 36.144 2 0.09845163633488582 0.002138871667699938 0.009818185533075476 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 96522 11245 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44906993586 48.298 2 0.09845125455954877 0.002138871667699938 0.00981826974614226 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 17393 11336 EHDPQYAVI True PC9_epitope_Rep4 1070.50327421546 1070.5021699358601 51.382 2 0.0984462746080276 0.002138871667699938 0.009819368300902605 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 74955 15927 NHM[Oxidation]AVAFVL True PC9_epitope_Rep4 1016.5113371818 1016.51022993586 69.191 2 0.09844619395780382 0.002138871667699938 0.009819386092942757 ['ENSG00000164919|ENST00000520468|COX6C'] 137141 9221 YAVEGRDL True PC9_epitope_Rep4 921.4555957470499 921.45448993586 43.066 2 0.0984443393134116 0.002138871667699938 0.00981979524980609 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 90624 8557 RENPNLVMPP True H1975_Epitope_Rep2 1165.5913780272099 1165.59028993586 37.871 2 0.09844257253357959 0.002138871667699938 0.009820185037833627 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 3981 15444 AHDVDPIEL True PC9_epitope_Rep1 1007.4923751785899 1007.49126993586 64.226 2 0.09843596859917023 0.002138871667699938 0.009821642132651128 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 105568 15987 SSDGAISLLTY True H1975_Epitope_Rep2 1125.55536935797 1125.55477496793 66.692 1 0.09843178147932392 0.002138871667699938 0.009822566087458613 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 11977 8634 DHNVSSVAI True PC9_epitope_Rep6 940.46140940348 940.46030993586 43.028 2 0.09843155093215769 0.002138871667699938 0.009822616963780693 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 21883 8486 ESDGKSRWFY True H1975_Epitope_Rep2 1273.5727507576098 1273.57111490379 37.593 3 0.09842949933824015 0.002138871667699938 0.009823069713254995 ['ENSG00000146476|ENST00000367294|ARMT1'] 43911 7609 IIALDGDTK True NCI_RA007_Epitope_Rep2 944.51786165044 944.51676993586 34.22 2 0.09840713751119064 0.002138871667699938 0.009828005854511525 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 10037 12433 AYSAKIALF True NCI_RA007_Epitope_Rep5 982.5487678558999 982.54766993586 54.48 2 0.0983961496219357 0.002138871667699938 0.009830432184878635 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 72805 19775 MPFGNVVSA True PC9_epitope_Rep5 920.4425885351999 920.44148993586 81.11 2 0.09838743048625878 0.002138871667699938 0.009832357939296972 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 97583 7702 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 34.608 2 0.09838676043542711 0.002138871667699938 0.009832505945172789 ['nc|ENSG00000128951|P33316-2|DUT'] 132751 13890 VVINFDFPK True NCI_RA007_Epitope_Rep5 1077.5858816406098 1077.58478993586 60.106 2 0.09838449813489118 0.002138871667699938 0.009833005674877606 ['ENSG00000110367|ENST00000534980|DDX6'] 97568 7651 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43364496793 34.408 1 0.09838376527010338 0.002138871667699938 0.009833167565866347 ['nc|ENSG00000128951|P33316-2|DUT'] 137671 13187 YEIPSNLTP True H1975_Epitope_Rep2 1032.51277627 1032.51227496793 55.85 1 0.09837639902170442 0.002138871667699938 0.009834794923140726 ['ENSG00000069248|ENST00000261396|NUP133'] 40239 20592 HQILTPFLL True PC9_epitope_Rep4 1080.6331661862 1080.63206993586 87.359 2 0.09837249063711 0.002138871667699938 0.009835658470905439 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 8728 20978 AVATDFFTV True PC9_epitope_Rep4 969.48074786573 969.4801949679301 88.853 1 0.09836996648884322 0.002138871667699938 0.00983621621360984 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 70494 10531 LVVSTQTALA True H1975_Epitope_Rep1 1001.5757108797299 1001.5746099358599 45.461 2 0.09836831466115538 0.002138871667699938 0.009836581222322673 ['CON__P02769'] 95816 9969 RYIPTAAAF True NCI_RA007_Epitope_Rep5 1008.5392658013599 1008.53816993586 44.988 2 0.09836714794255322 0.002138871667699938 0.009836839042998112 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 85833 6158 QHEGGVQEL True PC9_epitope_Rep1 995.46722305991 995.46612993586 28.501 2 0.09835993833998523 0.002138871667699938 0.009838432359169817 ['ENSG00000090273|ENST00000321265|NUDC'] 75018 14120 NHSDYNMVL True PC9_epitope_Rep1 1091.47059418819 1091.46948993586 59.139 2 0.09835992772179074 0.002138871667699938 0.00983843470596371 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 129264 3485 VQVEYKGETK True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61189490379 19.212 3 0.09835331376021834 0.002138871667699938 0.009839896603045562 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 97543 16496 SEEPWTVLP True H1975_Epitope_Rep2 1056.51277627 1056.51166993586 68.671 2 0.09834995485672102 0.002138871667699938 0.00984063910758601 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF'] 99142 14329 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 60.202 2 0.09834115188931376 0.002138871667699938 0.00984258530698102 ['ENSG00000132646|ENST00000379143|PCNA'] 40928 4255 HSSNVKVVL True NCI_RA007_Epitope_Rep3 981.5607295219299 981.55962993586 23.429 2 0.0983409976768328 0.002138871667699938 0.009842619404241422 ['ENSG00000055483|ENST00000449938|USP36'] 7999 6989 ATDINGDDY True H1975_Epitope_Rep3 982.3879696796998 982.38686993586 31.845 2 0.09832574449676473 0.002138871667699938 0.009845992526861958 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 132817 19139 VVLGEFGVRNV True PC9_epitope_Rep1 1187.6662572196299 1187.6651699358601 78.41 2 0.09832552145255534 0.002138871667699938 0.009846041859548887 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 48202 21103 IYPTTYVQF True PC9_epitope_Rep3 1130.56481184286 1130.56370993586 86.454 2 0.09832395270789197 0.002138871667699938 0.00984638883953468 ['ENSG00000179820|ENST00000391770|MYADM'] 4812 5744 ALEEAMEQK True PC9_epitope_Rep4 1047.4906609264297 1047.4895699358601 28.924 2 0.09832118776956339 0.002138871667699938 0.00984700042590495 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 106488 18802 STLDGVLEV True PC9_epitope_Rep6 931.48622716899 931.4856749679301 84.962 1 0.09831405840864654 0.002138871667699938 0.009848577561511716 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6'] 97759 8008 SEITDTVAA True H1975_Epitope_Rep1 905.43419159613 905.43364496793 35.748 1 0.09830986049405897 0.002138871667699938 0.009849506324272457 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 127168 18586 VLVDAFSHV True PC9_epitope_Rep5 985.5232813840499 985.52218993586 76.516 2 0.09830973898903403 0.002138871667699938 0.009849533207756616 ['ENSG00000101413|ENST00000373433|RPRD1B', 'RPRD1B|p.K138Qfs*22|1|0.16|ENSG00000101413|chr20:38048471-38048472|-/C|frameshift_variant'] 77358 14089 NSEITYSFY True H1975_Epitope_Rep2 1122.48695544498 1122.48637496793 59.349 1 0.09830966762689365 0.002138871667699938 0.009849548996954963 ['PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 138592 15159 YIDPSGFVKA True PC9_epitope_Rep6 1095.5600608155898 1095.5589699358602 70.385 2 0.09829531070501996 0.002138871667699938 0.009852726022847192 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48', 'nc|ENSG00000090686|Q86UV5-4|USP48', 'nc|ENSG00000090686|Q86UV5-7|USP48'] 56856 15592 LDPHLVLDQL True H1975_Epitope_Rep1 1161.6393737654498 1161.63826993586 65.258 2 0.09829266955213531 0.002138871667699938 0.009853310586930331 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 27844 8057 FQDGTKATF True PC9_epitope_Rep4 1013.4818104948899 1013.48070993586 38.443 2 0.09829053178563128 0.002138871667699938 0.009853783761191521 ['ENSG00000110711|ENST00000279146|AIP'] 38832 6194 HHDDPEVL True PC9_epitope_Rep1 960.4301092752 960.42900993586 28.64 2 0.09828615285761128 0.002138871667699938 0.00985475306295552 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 105952 5773 SSSKGSLGGGF True NCI_RA007_Epitope_Rep5 982.4719740871798 982.47086993586 28.893 2 0.09827684817971162 0.002138871667699938 0.009856813011026321 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 132960 7893 VVPEM[Oxidation]TEILK True H1975_Epitope_Rep1 1173.63151188413 1173.6304099358601 35.312 2 0.09826892701884093 0.002138871667699938 0.009858566988413473 ['ENST00000559973.5_1_15:76508902-76510013:-|nuORF', 'ENST00000560179.1_1_15:76508902-76518306:-|nuORF', 'nc|ENSG00000140374|P13804-2|ETFA', 'ENSG00000140374|ENST00000557943|ETFA'] 7542 13228 ASEDSVLLY True H1975_Epitope_Rep2 995.4811417885501 995.4805949679301 56.009 1 0.09826082358496374 0.002138871667699938 0.009860361634768847 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 7829 4867 ASVNTLVNK True NCI_RA007_Epitope_Rep5 944.52909504048 944.52798993586 25.414 2 0.09825434632757667 0.002138871667699938 0.009861796360375591 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 103762 20635 SPVSIMVV True PC9_epitope_Rep1 830.4571759701801 830.4566249679301 84.194 1 0.09824931516530302 0.002138871667699938 0.00986291091053083 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 17340 17596 EHASSLLEL True PC9_epitope_Rep5 997.5080252427299 997.50692993586 72.691 2 0.0982466126729801 0.002138871667699938 0.009863509641575355 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 87738 9175 QRAPGVADL True PC9_epitope_Rep2 925.4981292653699 925.49702993586 40.629 2 0.09823480487301951 0.002138871667699938 0.009866126039958732 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'ENST00000400933.2_1_1:247348476-247348617:-|nuORF', 'ENST00000545220.1_1_12:7343495-7354840:+|nuORF'] 95236 13982 RVLPPSALQSV True PC9_epitope_Rep4 1165.68190728377 1165.68080993586 61.688 2 0.09822588141203052 0.002138871667699938 0.009868103759750621 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'nc|ENSG00000178999|Q96GD4-2|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB'] 5558 20206 AMSSKFFLV True PC9_epitope_Rep5 1028.5364889200398 1028.5353899358602 82.769 2 0.0982192579261461 0.002138871667699938 0.009869571977419304 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 137882 10607 YEVEKTLGI True H1975_Epitope_Rep3 1050.5597264624198 1050.5586299358602 45.868 2 0.09821384350752949 0.002138871667699938 0.00987077233798609 ['ENSG00000148606|ENST00000372371|POLR3A'] 132187 11159 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 49.559 2 0.09821360931872185 0.002138871667699938 0.009870824260095662 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 39034 4360 HHSDGSVSL True PC9_epitope_Rep1 937.42535824793 937.42426993586 21.658 2 0.09821258126202555 0.002138871667699938 0.009871052194109407 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 121801 15879 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 66.334 2 0.09820978051444948 0.002138871667699938 0.009871673183057015 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 109985 5219 TEIGSIHSA True NCI_RA007_Epitope_Rep4 913.45051036661 913.44940993586 26.609 2 0.09820437377843555 0.002138871667699938 0.009872872083961124 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 28399 14813 FRYPTTEEL True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 64.916 2 0.09820307965838053 0.002138871667699938 0.00987315906545602 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 97861 11665 SELPTTVTV True H1975_Epitope_Rep1 945.50187723313 945.50132496793 49.859 1 0.09820198824286475 0.002138871667699938 0.0098734011017855 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 96948 7558 SAVTSVAKV True PC9_epitope_Rep3 860.4967322830399 860.49562993586 34.073 2 0.09819920841626129 0.002138871667699938 0.009874017591973372 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 2848 2725 AEVEHVVNA True H1975_Epitope_Rep2 966.4770594676199 966.47596993586 14.567 2 0.09819402677873212 0.002138871667699938 0.009875166836820546 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 84410 15437 QADLINELY True H1975_Epitope_Rep1 1077.53423999057 1077.53367496793 64.648 1 0.09818641713490703 0.002138871667699938 0.009876854825110429 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 23314 7849 EVQLVESGG True NCI_RA007_Epitope_Rep5 916.4501760134399 916.44906993586 36.889 2 0.09818187307501877 0.002138871667699938 0.009877862930043651 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 132691 4478 VVGVGMTK True NCI_RA007_Epitope_Rep5 789.44186025921 789.44076993586 23.875 2 0.09818060130944696 0.002138871667699938 0.009878145090298277 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 33364 13301 GKVQIPIML True NCI_RA007_Epitope_Rep3 997.5994235297699 997.59832993586 59.585 2 0.09817681135423452 0.002138871667699938 0.009878985994305737 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 29020 11288 FTEPNEISQY True H1975_Epitope_Rep1 1226.54553295026 1226.5449749679299 48.397 1 0.0981618751275623 0.002138871667699938 0.009882300665380076 ['ENSG00000143155|ENST00000367833|TIPRL'] 87555 14006 QQLEPVTGQV True PC9_epitope_Rep1 1097.57168812845 1097.5705899358602 58.711 2 0.09815283902277183 0.002138871667699938 0.009884306487528105 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 60453 11837 LGVTVLSR True PC9_epitope_Rep1 843.5178020807899 843.51670993586 50.396 2 0.09815098460855796 0.002138871667699938 0.009884718175917526 ['ENSG00000159231|ENST00000290354|CBR3'] 85738 9182 QHDDQQPVVL True PC9_epitope_Rep4 1177.5727507576098 1177.57164993586 42.913 2 0.09814481554263517 0.002138871667699938 0.009886087854426876 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 32900 9850 GHVAPSVSL True PC9_epitope_Rep2 865.4657665079301 865.46466993586 43.223 2 0.09814434856568029 0.002138871667699938 0.009886191541729648 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 78083 12001 NVVNRLTSV True PC9_epitope_Rep2 1000.56654317836 1000.56544993586 51.479 2 0.09814258949356566 0.002138871667699938 0.009886582134443088 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 48323 20104 IYSAERFLI True PC9_epitope_Rep3 1110.60734536118 1110.6062499358602 82.583 2 0.09813309566584139 0.002138871667699938 0.009888690443307402 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 53038 8423 KPLQPLPNTA True PC9_epitope_Rep2 1077.61824439805 1077.6171499358602 37.769 2 0.09812910654082496 0.002138871667699938 0.00988957644246951 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'ENST00000436442.2_2_6:30314274-30314587:+|nuORF'] 43829 16028 IHSEPLGVVL True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 73.977 2 0.09812739822133393 0.002138871667699938 0.009889955889612407 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 76568 22070 NQLDSLMGL True PC9_epitope_Rep3 989.48518162317 989.48408993586 90.189 2 0.09812043757177781 0.002138871667699938 0.00989150211330144 ['ENSG00000135148|ENST00000412615|TRAFD1'] 82420 7915 PPPAPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 37.875 2 0.09811793225728871 0.002138871667699938 0.009892058694940772 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'DGKK|p.A42P|1|0.95|ENSG00000274588|chrX:50470555-50470555|C/G|missense_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'BOD1L1|p.L1167Ffs*9|1|0.15|ENSG00000038219|chr4:13603380-13603399|AATCTGCTGTGCAAGTTCTC/-|frameshift_variant', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 1269 16211 AEDLNLLIA True H1975_Epitope_Rep2 970.53351171458 970.53240993586 67.565 2 0.09811052648439628 0.002138871667699938 0.009893704139143625 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'DDB1|p.N36T|1|0.23|ENSG00000167986|chr11:61331646-61331646|T/G|missense_variant'] 96024 18260 RYLPKGFLNQF True PC9_epitope_Rep4 1381.7506555499297 1381.7495499358602 78.308 2 0.09810489357728477 0.002138871667699938 0.00989495585589628 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 139131 11948 YLDQM[Oxidation]EDLY True H1975_Epitope_Rep2 1204.4958062569601 1204.49470993586 51.036 2 0.09810389750532583 0.002138871667699938 0.009895177213809388 ['ENSG00000198356|ENST00000357332|GET3'] 114641 6943 TQDTQPHYI True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 33.943 2 0.09810212251359021 0.002138871667699938 0.009895571683440652 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 134368 5711 VYPERSTSY True PC9_epitope_Rep4 1100.51383889916 1100.51274993586 28.787 2 0.09807401736578403 0.002138871667699938 0.009901819700818345 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 73010 12983 MRAFADAL True PC9_epitope_Rep6 893.4429228883698 893.44182993586 61.514 2 0.0980732792250675 0.002138871667699938 0.00990198384662419 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 104710 13997 SQVDRLVAL True PC9_epitope_Rep6 999.5712942056298 999.57018993586 65.697 2 0.09806944704439283 0.002138871667699938 0.009902836078710951 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 104236 13700 SQHGVIIQL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 64.483 2 0.09806818254440845 0.002138871667699938 0.009903117304057199 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 54052 17618 KVIDYVPGI True PC9_epitope_Rep4 1002.5749826037398 1002.57388993586 75.79 2 0.0980673712137503 0.002138871667699938 0.009903297748363392 ['ENSG00000163659|ENST00000295924|TIPARP'] 97301 9880 SEALPSDIA True H1975_Epitope_Rep2 901.43927697657 901.43872496793 42.991 1 0.09805942688131045 0.002138871667699938 0.00990506477650376 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 73782 22097 NAFSENFLEV True PC9_epitope_Rep5 1168.5400536470001 1168.53894993586 90.028 2 0.09805001301424694 0.002138871667699938 0.009907159057368156 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 1152 7778 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 34.865 2 0.09803434589050981 0.002138871667699938 0.009910645422694694 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 21413 14901 ERINNINIL True PC9_epitope_Rep6 1097.61930702721 1097.61820993586 69.308 2 0.09802775650284964 0.002138871667699938 0.009912112092265354 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 54018 12185 KVGPVLSV True PC9_epitope_Rep5 797.50108938749 797.49998993586 51.859 2 0.09802567551802413 0.002138871667699938 0.00991257532207222 ['UPP1|p.Y98C|1|0.48|ENSG00000183696|chr7:48101954-48101954|A/G|missense_variant', 'ENSG00000183696|ENST00000395564|UPP1'] 87972 17381 QRMTTQLLL True PC9_epitope_Rep1 1102.6168644990598 1102.61576993586 71.661 2 0.09802189027497939 0.002138871667699938 0.009913417974856764 ['ENSG00000110195|ENST00000393676|FOLR1'] 109139 8835 TAMDAQEAL True NCI_RA007_Epitope_Rep3 948.4222470134399 948.42114993586 41.845 2 0.09801521696846519 0.002138871667699938 0.009914903721119963 ['ENST00000433877.6_1_12:122990076-123005058:-|nuORF', 'nc|ENSG00000111011|Q7L4I2-2|RSRC2', 'ENSG00000111011|ENST00000331738|RSRC2'] 138671 16893 YIITGGGFL True H1975_Epitope_Rep2 939.5065686907499 939.5060249679301 70.224 1 0.0980128689735589 0.002138871667699938 0.009915426529711948 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 98271 7605 SEVGDTQVV True H1975_Epitope_Rep3 932.4450906330001 932.44398993586 34.234 2 0.09800846201961817 0.002138871667699938 0.00991640786071648 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 70940 16355 LYGKIAEAF True PC9_epitope_Rep2 1010.5436824754598 1010.54258993586 68.155 2 0.09800013330011505 0.002138871667699938 0.009918262735197974 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 137421 10061 YEATPIPEA True H1975_Epitope_Rep2 989.4705771048498 989.47002496793 43.692 1 0.09799729996231614 0.002138871667699938 0.009918893818372075 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 21401 5800 ERIMKAQAL True PC9_epitope_Rep4 1058.5906497512199 1058.58954993586 29.166 2 0.09799234447772244 0.002138871667699938 0.00991999766981633 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 124767 18334 VHDEGVWAL True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 75.536 2 0.09799128728756995 0.002138871667699938 0.009920233177778978 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 4475 21563 AIVDLIHDI True PC9_epitope_Rep3 1007.5651461960299 1007.56404993586 88.237 2 0.09798913402356245 0.002138871667699938 0.00992071287224771 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 114601 9506 TQDPTAQSL True PC9_epitope_Rep5 959.45598966987 959.45488993586 41.522 2 0.09798805901304002 0.002138871667699938 0.00992095236654188 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 24061 10874 EYNSDLHQF True PC9_epitope_Rep4 1151.4883524273098 1151.48724993586 49.59 2 0.0979873526601031 0.002138871667699938 0.00992110973312041 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 70498 10688 LVVSTQTALA True H1975_Epitope_Rep3 1001.5757108797299 1001.57517496793 46.187 1 0.09798103544676882 0.002138871667699938 0.009922517234996058 ['CON__P02769'] 90393 10557 REIDDYIVQA True H1975_Epitope_Rep2 1220.6037165327198 1220.60317496793 45.628 1 0.09797307371136472 0.002138871667699938 0.009924291414837265 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 8545 8544 ATVAVPLVGK True NCI_RA007_Epitope_Rep3 953.5909670210499 953.58986993586 40.68 2 0.09797274994277834 0.002138871667699938 0.009924363569295921 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 21214 8467 ERDPATYNI True PC9_epitope_Rep6 1077.5090878718902 1077.50798993586 42.274 2 0.09796651854421698 0.002138871667699938 0.009925752384632803 ['ENSG00000138246|ENST00000260818|DNAJC13'] 107749 5072 SVSNVVITK True NCI_RA007_Epitope_Rep5 945.54949613189 945.54838993586 26.21 2 0.09796312924450225 0.002138871667699938 0.009926507848551293 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 105301 17283 SRMPGELVL True PC9_epitope_Rep1 1000.5375515491999 1000.53644993586 71.296 2 0.09796196593512799 0.002138871667699938 0.009926767159090842 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 115823 8789 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 38.771 1 0.09795009519883355 0.002138871667699938 0.009929413606470606 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 728 9764 AAVGSVATL True H1975_Epitope_Rep3 787.44396843419 787.44341496793 42.58 1 0.09794810973638536 0.002138871667699938 0.009929856308763849 ['ALKBH1|p.A5S|1|0.66|ENSG00000100601|chr14:77707992-77707992|C/A|missense_variant', 'ENSG00000100601|ENST00000216489|ALKBH1'] 76879 10761 NRDLATPVM True PC9_epitope_Rep2 1015.51206507735 1015.51096993586 46.711 2 0.09794505371990492 0.002138871667699938 0.00993053775131707 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 47763 20816 IYEPNFIFF True NCI_RA007_Epitope_Rep4 1188.5855472874398 1188.5844499358602 90.188 2 0.09794371775902767 0.002138871667699938 0.009930835663140007 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 110588 15922 TFSDVEAHF True PC9_epitope_Rep2 1051.46107505031 1051.45996993586 66.494 2 0.0979398984176668 0.002138871667699938 0.009931687402011696 ['ENSG00000056277|ENST00000370978|ZNF280C'] 72130 10890 [Acetylation]-M[Oxidation]FQVPDSEGGR True H1975_Epitope_Rep3 1279.5503017576098 1279.54920993586 46.973 2 0.09793959683544426 0.002138871667699938 0.009931754659850574 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'ENST00000569256.5_1_16:1728292-1741847:+|nuORF', 'ENST00000567717.1_1_16:1728292-1742376:+|nuORF'] 38876 5820 HHEAGVTAL True PC9_epitope_Rep5 933.4668291370899 933.4657299358599 27.38 2 0.09793415542240724 0.002138871667699938 0.009932968259918814 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 32733 14997 GHADVAQLL True PC9_epitope_Rep1 922.4872302285 922.48612993586 62.505 2 0.09793411304374616 0.002138871667699938 0.009932977712200421 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1', 'DAPK1|p.V1032Cfs*64|1|0.19|ENSG00000196730|chr9:87706165-87706165|G/-|frameshift_variant', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000495281.1_1_9:90263689-90265069:+|nuORF', 'nc|ENSG00000196730|P53355-2|DAPK1'] 134260 17943 VYNENLVHMI True PC9_epitope_Rep4 1230.60669373818 1230.60558993586 77.068 2 0.09792980036317717 0.002138871667699938 0.009933939672129074 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 140865 4903 YSDVHNCSY True H1975_Epitope_Rep2 1086.40765957846 1086.40656993586 23.943 2 0.09792947660138683 0.002138871667699938 0.009934011892025299 ['ENST00000557983.1_1_15:80423514-80429967:+|nuORF', 'nc|ENSG00000086666|Q6FIF0-2|ZFAND6', 'ENSG00000086666|ENST00000261749|ZFAND6'] 133718 19428 VYDPATETW True PC9_epitope_Rep5 1080.4763907612798 1080.47528993586 79.78 2 0.09792662044112842 0.002138871667699938 0.009934649022881334 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 107286 22633 SVLDGLLYV True PC9_epitope_Rep4 977.54334812229 977.54224993586 95.285 2 0.09792440740542524 0.002138871667699938 0.009935142717142105 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 115116 11629 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 49.611 2 0.09792351697203588 0.002138871667699938 0.009935341365755542 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 88566 12678 QTDIQGALSAY True H1975_Epitope_Rep1 1165.5615173675699 1165.56097496793 53.821 1 0.09791481252283216 0.002138871667699938 0.009937283458878897 ['ENSG00000198730|ENST00000361367|CTR9'] 104170 17158 SQFPEEILL True NCI_RA007_Epitope_Rep3 1074.55972646242 1074.5586299358602 75.376 2 0.09790733682291412 0.002138871667699938 0.009938951688831493 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 84918 7120 QEDSFSAEA True H1975_Epitope_Rep2 982.3879696797 982.3874249679301 32.319 1 0.09790103489059247 0.002138871667699938 0.009940358195860038 ['ENSG00000155096|ENST00000337198|AZIN1'] 94715 8752 RSDTPLIY True H1975_Epitope_Rep3 963.5025459394699 963.50144993586 38.669 2 0.09789273862714662 0.002138871667699938 0.009942210100593723 ['ENSG00000196305|ENST00000443024|IARS1'] 318 18947 AAIASLLYL True H1975_Epitope_Rep3 933.55351888317 933.55242993586 79.462 2 0.0978918273202229 0.002138871667699938 0.00994241354400299 ['ENSG00000172992|ENST00000651974|DCAKD'] 15250 12314 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 52.393 2 0.09788697495648725 0.002138871667699938 0.009943496869900625 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 96854 6439 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42828993586 29.741 2 0.09788351328304395 0.002138871667699938 0.009944269782813367 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 34723 6618 GQEDHYNNL True PC9_epitope_Rep3 1088.45230127176 1088.45120993586 30.48 2 0.09788272721380643 0.002138871667699938 0.009944445302176374 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 62603 20763 LLLAQLSDA True PC9_epitope_Rep2 942.53859709502 942.53750993586 85.307 2 0.09788266520391731 0.002138871667699938 0.009944459148329633 ['ENSG00000175348|ENST00000534025|TMEM9B'] 30174 10602 FYQEHPDL True PC9_epitope_Rep4 1047.4661604307498 1047.4650699358601 48.527 2 0.0978741578019773 0.002138871667699938 0.009946358935759946 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 84853 10833 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 46.698 2 0.09787288764658325 0.002138871667699938 0.009946642603803539 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 107964 6007 SVYGYGVQK True NCI_RA007_Epitope_Rep5 999.5025459394698 999.50144993586 29.79 2 0.09787217936189271 0.002138871667699938 0.00994680079074085 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 126711 15880 VLPGHFNTF True PC9_epitope_Rep2 1030.5236157372199 1030.5225099358602 66.338 2 0.09787041419730164 0.002138871667699938 0.009947195029645856 ['ENSG00000176055|ENST00000316610|MBLAC2'] 138436 11486 YHISPSSSSL True PC9_epitope_Rep1 1076.5138388991602 1076.51274993586 49.061 2 0.097865300191683 0.002138871667699938 0.00994833729626429 ['ENSG00000130702|ENST00000252999|LAMA5'] 87359 5020 QPSQPVTSA True PC9_epitope_Rep5 913.4505103666099 913.4499649679301 24.341 1 0.09786497305143878 0.002138871667699938 0.00994841037071797 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 2506 9489 AEQNIIPSA True H1975_Epitope_Rep1 941.4818104948899 941.48070993586 41.419 2 0.09786051861375848 0.002138871667699938 0.009949405424927178 ['ENSG00000183508|ENST00000369448|TENT5C'] 114097 22280 TPFTGPFISV True PC9_epitope_Rep5 1064.55424715916 1064.5531499358601 90.706 2 0.09784864556325636 0.002138871667699938 0.009952058149410381 ['ENSG00000164142|ENST00000435205|FHIP1A'] 99061 12223 SHGEPTITSL True PC9_epitope_Rep5 1040.51383889916 1040.51274993586 52.003 2 0.0978458037149589 0.002138871667699938 0.009952693186646568 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 117037 8399 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.5649349679301 37.25 1 0.09784465480860663 0.002138871667699938 0.009952949931354534 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 133686 12820 VYAQVARLF True NCI_RA007_Epitope_Rep5 1065.5971150306498 1065.5960099358601 55.994 2 0.09784427713982582 0.002138871667699938 0.00995303432991897 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 109660 10713 TEAPVPVSV True H1975_Epitope_Rep2 897.4807478657299 897.47964993586 46.232 2 0.09784306061784488 0.002138871667699938 0.009953306193699402 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 132243 15050 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 69.932 2 0.09783760631491313 0.002138871667699938 0.009954525188031626 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 78533 12787 NYPQSVPRL True PC9_epitope_Rep2 1072.56654317836 1072.5654499358602 54.488 2 0.09782978789452057 0.002138871667699938 0.00995627279274982 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 106649 6427 STSSVIMMK True NCI_RA007_Epitope_Rep3 982.48273909502 982.48164993586 32.295 2 0.09782835657207924 0.002138871667699938 0.009956592759395855 ['ENST00000521804.1_1_8:142264568-142318349:-|nuORF'] 83565 19847 PVAEYFSGV True PC9_epitope_Rep2 967.4650978015899 967.46400993586 81.734 2 0.09782008256381844 0.002138871667699938 0.009958442574568398 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 132750 13786 VVINFDFPK True NCI_RA007_Epitope_Rep4 1077.5858816406098 1077.58478993586 60.251 2 0.0978134071460746 0.002138871667699938 0.009959935232845076 ['ENSG00000110367|ENST00000534980|DDX6'] 104352 18422 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54370993586 76.065 2 0.0978100390436766 0.002138871667699938 0.009960688439175606 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 4023 20540 AHFPINVVI True PC9_epitope_Rep1 1008.5756513100799 1008.57454993586 83.819 2 0.09780994254222687 0.002138871667699938 0.009960710020526821 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 1368 6575 AEEDAALQA True H1975_Epitope_Rep3 916.4137905047199 916.41268993586 30.246 2 0.09780973621430769 0.002138871667699938 0.009960756163354203 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1'] 140554 19365 YRPPELLL True PC9_epitope_Rep2 999.5753169569099 999.57420993586 79.864 2 0.09780462943565887 0.002138871667699938 0.009961898299716793 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 21745 6826 ERTQENVTL True PC9_epitope_Rep2 1088.5462016565998 1088.5451099358602 31.662 2 0.09779728989086979 0.002138871667699938 0.009963540015445076 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 12381 8836 DISLSDYK True H1975_Epitope_Rep1 939.45492704071 939.45382993586 38.91 2 0.09779372335446299 0.002138871667699938 0.009964337874608454 ['ENSG00000117450|ENST00000319248|PRDX1'] 45150 22897 IPNSIMTILEA True PC9_epitope_Rep2 1200.6424105405601 1200.6413099358601 93.577 2 0.09779004421387154 0.002138871667699938 0.009965160988006311 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 134756 19936 VYTSVVEEL True PC9_epitope_Rep2 1037.5280919809697 1037.52698993586 82.081 2 0.09778885191800818 0.002138871667699938 0.009965427747564011 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 52826 11261 KPANLLISA True PC9_epitope_Rep4 925.55966689277 925.55856993586 51.09 2 0.09778534177760222 0.002138871667699938 0.009966213132050483 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 1806 10291 AEHPIVIVC True H1975_Epitope_Rep2 979.5160878286299 979.51498993586 44.59 2 0.09778218139139766 0.002138871667699938 0.009966920310507171 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276Q|1|0.1|ENSG00000150990|chr12:124977403-124977403|C/G|missense_variant'] 99147 12588 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 56.249 2 0.09778109761881422 0.002138871667699938 0.009967162830066677 ['ENSG00000132646|ENST00000379143|PCNA'] 1327 14879 AEDTISILP True H1975_Epitope_Rep3 957.5018772331299 957.50078993586 62.619 2 0.09777796705142616 0.002138871667699938 0.009967863399644712 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 66087 4998 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 24.31 3 0.09777388604231345 0.0021681224059964073 0.009968776733031603 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 125035 11438 VIDEQTPLY True H1975_Epitope_Rep2 1076.5389910178399 1076.5378899358602 49.049 2 0.09776764326017201 0.0021681224059964073 0.009970174027625824 ['ENSG00000083857|ENST00000441802|FAT1', 'ENST00000500085.2_1_4:187509748-187518366:-|nuORF'] 8639 5905 AVADSVLTK True NCI_RA007_Epitope_Rep4 902.50729696674 902.50618993586 29.336 2 0.09776547853262738 0.0021681224059964073 0.009970658592754441 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF'] 60615 20338 LHIDPNFASL True PC9_epitope_Rep1 1125.58185888933 1125.5807699358602 83.06 2 0.09775975924341021 0.0021681224059964073 0.009971938939647259 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 134709 21716 VYTPTDTLVF True PC9_epitope_Rep5 1154.5859412102598 1154.5848499358601 88.568 2 0.09774806088872495 0.0021681224059964073 0.009974558276839969 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 115615 15336 TRVDPLTL True PC9_epitope_Rep5 913.5232813840499 913.52218993586 64.0 2 0.09774787883487193 0.0021681224059964073 0.009974599045061703 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 2433 5181 AEQIKHILA True H1975_Epitope_Rep2 1021.5920296502098 1021.59092993586 25.001 2 0.09774743049624379 0.0021681224059964073 0.009974699444431068 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000458298.1_1_6:86137181-86137394:-|nuORF', 'ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 117837 20115 TVYEGFISA True PC9_epitope_Rep1 985.4756624852898 985.47511496793 82.202 1 0.09773757148389318 0.0021681224059964073 0.009976907480628034 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 109143 16697 TAMDVVYAL True NCI_RA007_Epitope_Rep1 981.4841189940099 981.48302993586 69.069 2 0.09773726370000681 0.0021681224059964073 0.009976976419782563 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 85837 6133 QHEGGVQEL True PC9_epitope_Rep3 995.46722305991 995.46612993586 28.638 2 0.09773626348793642 0.0021681224059964073 0.009977200456009451 ['ENSG00000090273|ENST00000321265|NUDC'] 85119 20265 QELLYVVPFVA True H1975_Epitope_Rep1 1276.70672504928 1276.70562993586 84.297 2 0.09773436889876864 0.0021681224059964073 0.009977624835781561 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 96797 10167 SAQGSDVSLTA True PC9_epitope_Rep5 1034.48801807414 1034.4869299358602 44.094 2 0.09772312377982448 0.0021681224059964073 0.009980144048298289 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 23888 12808 EYISTVKTL True PC9_epitope_Rep2 1052.57537652656 1052.57426993586 54.567 2 0.09772283408719568 0.0021681224059964073 0.009980208955345845 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 8285 18344 ATIGELAQV True PC9_epitope_Rep2 900.4916469025999 900.49054993586 75.89 2 0.0977203578658236 0.0021681224059964073 0.00998076378126894 ['ENSG00000198793|ENST00000361445|MTOR'] 98985 17788 SHDEVFVVL True PC9_epitope_Rep6 1043.52876068731 1043.52766993586 81.056 2 0.09770589834336832 0.0021681224059964073 0.009984004191618417 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 97519 8720 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42760993586 38.469 2 0.0977002777988916 0.0021681224059964073 0.009985264038761063 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 133130 21054 VVQPLLVSV True PC9_epitope_Rep5 952.5957180483199 952.59462993586 86.044 2 0.09769815652745677 0.0021681224059964073 0.009985739561974356 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 6276 5479 APRGDGVQVSA True PC9_epitope_Rep5 1055.5359713260698 1055.5348699358601 26.084 2 0.09769558409197815 0.0021681224059964073 0.009986316251153898 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 45716 14667 IRPENVIIY True PC9_epitope_Rep6 1115.6338944621898 1115.63278993586 68.34 2 0.09769253631860739 0.0021681224059964073 0.009986999542822486 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 38813 8147 HHAESKNGWTL True PC9_epitope_Rep3 1278.61053324866 1278.6088949037899 36.317 3 0.09769137249183096 0.0021681224059964073 0.009987260477254355 ['ENSG00000110048|ENST00000263847|OSBP'] 97868 10524 SELPVSEVA True H1975_Epitope_Rep2 929.47057710485 929.46948993586 45.502 2 0.09768990805648507 0.0021681224059964073 0.009987588818524512 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 106379 4395 STIDPAVSK True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 23.258 2 0.0976767574403753 0.0021681224059964073 0.00999053778173822 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 30237 22056 FYVDSDMVNEF True PC9_epitope_Rep3 1364.5594687622395 1364.5583699358601 90.135 2 0.09767374742581184 0.0021681224059964073 0.009991212880048513 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 98184 6776 SETEATPVP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 30.979 1 0.09767035581659925 0.0021681224059964073 0.00999197361611546 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 35799 13282 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.5172549679301 62.742 1 0.09766404941580635 0.0021681224059964073 0.009993388285249226 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 6762 20160 AQDEHLITFF True PC9_epitope_Rep4 1219.58733819259 1219.58624993586 85.682 2 0.09765720561705638 0.0021681224059964073 0.009994923721201495 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 89725 9547 RADDTFEAL True NCI_RA007_Epitope_Rep4 1036.48253877088 1036.48197496793 43.571 1 0.0976544206243772 0.002198414664354719 0.009995548610833063 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 84414 15450 QADLINELY True H1975_Epitope_Rep3 1077.53423999057 1077.5331499358601 64.843 2 0.09765207082585085 0.002198414664354719 0.00999607588169363 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 118011 16858 TYDYNFHSF True PC9_epitope_Rep4 1192.48253877088 1192.4814499358602 72.825 2 0.09765138199737176 0.002198414664354719 0.009996230452819894 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 110215 9757 TEQPPSPLP True H1975_Epitope_Rep2 964.48656152216 964.48601496793 42.519 1 0.09764759861675172 0.002198414664354719 0.009997079473195376 ['ENSG00000075568|ENST00000186436|TMEM131'] 78671 18279 NYVQAVEEF True PC9_epitope_Rep6 1097.5029398622898 1097.50184993586 82.952 2 0.09763550466758501 0.002198414664354719 0.009999793912062113 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 121174 7039 VESENYVQA True H1975_Epitope_Rep3 1037.4665543535696 1037.46544993586 32.04 2 0.09763469886007858 0.002198414664354719 0.009999974797344083 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF'] 27801 20162 FQDDNNLYL True PC9_epitope_Rep3 1140.50875351872 1140.5076499358602 82.807 2 0.09763333736385678 0.002198414664354719 0.01000028042907649 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 18857 9227 ELDPTNM[Oxidation]TY True H1975_Epitope_Rep2 1098.45394144498 1098.45284993586 40.445 2 0.09761532368089716 0.002198414664354719 0.010004325020279616 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 38993 9000 HHMGGMAGL True PC9_epitope_Rep1 909.3949271501299 909.39382993586 39.466 2 0.09761523346897892 0.002198414664354719 0.010004345279383531 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 89731 12156 RADGNFLLY True H1975_Epitope_Rep1 1067.53999407735 1067.5388899358602 51.776 2 0.09760863904222952 0.002198414664354719 0.010005826311416569 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 8572 17170 ATVPGLLKV True PC9_epitope_Rep3 896.5695033004799 896.56840993586 71.201 2 0.09760268351264804 0.0022100804223709252 0.01000716403429963 ['ENSG00000179820|ENST00000391770|MYADM'] 105803 6486 SSIQGQWPK True NCI_RA007_Epitope_Rep3 1029.5243440132099 1029.5232499358601 32.544 2 0.09760189859798879 0.0022100804223709252 0.010007340353479723 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 90268 9903 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54436993586 43.08 2 0.09760140912291428 0.0022100804223709252 0.010007450308136056 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 57917 6629 LEGFHTQISK True NCI_RA007_Epitope_Rep2 1158.6033226099 1158.60166490379 30.396 3 0.09758889795085425 0.0022100804223709252 0.010010261182946198 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1', 'ENST00000560420.1_1_14:24606925-24607473:+|nuORF'] 94877 12974 RTADGEFMAV True PC9_epitope_Rep2 1095.50189431647 1095.5007899358602 55.196 2 0.09758058372695932 0.0022100804223709252 0.010012129549444367 ['ENST00000506639.5_1_5:33994220-34005893:-|nuORF', 'ENSG00000242110|ENST00000335606|AMACR', 'nc|ENSG00000242110|Q9UHK6-5|AMACR'] 105465 21247 SRVPLLLPL True PC9_epitope_Rep3 1006.65390163078 1006.65280993586 87.02 2 0.09757326659156319 0.0022100804223709252 0.010013774126171193 ['ENSG00000168140|ENST00000304735|VASN'] 2095 9979 AELGEAPVP True H1975_Epitope_Rep1 881.4494477374499 881.4488949679301 43.321 1 0.09756848712439059 0.0022100804223709252 0.010014848483586114 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 124716 17257 VHAELADVL True PC9_epitope_Rep1 965.5181960036099 965.51708993586 71.196 2 0.0975666801916391 0.0022100804223709252 0.010015254685458714 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'CCT6B|p.I363*|1|0.11|ENSG00000132141|chr17:34939308-34939309|AT/-|frameshift_variant', 'CCT6B|p.E364Rfs*28|1|0.12|ENSG00000132141|chr17:34939306-34939306|C/-|frameshift_variant', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 75078 15980 NHVISPLL True PC9_epitope_Rep1 891.5178020807899 891.51670993586 66.276 2 0.0975586276079979 0.0022100804223709252 0.010017065112493123 ['ENSG00000155096|ENST00000337198|AZIN1'] 115133 11644 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 49.784 2 0.09755843909223948 0.0022100804223709252 0.010017107499403741 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 111816 21612 TILPAIILV True PC9_epitope_Rep6 951.63685458431 951.63574993586 96.009 2 0.09755216043425187 0.0022100804223709252 0.01001851932485021 ['ENSG00000198712|ENST00000361739|MT-CO2'] 118414 13653 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47107496793 60.408 1 0.09754993279548176 0.0022100804223709252 0.010019020279603745 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 21884 8693 ESDGKSRWFY True H1975_Epitope_Rep2 1273.5727507576098 1273.57111490379 38.399 3 0.09753059912329748 0.0022100804223709252 0.010023369068738252 ['ENSG00000146476|ENST00000367294|ARMT1'] 49187 7477 KEMENFEAP True H1975_Epitope_Rep2 1093.4750108622898 1093.47390993586 33.708 2 0.09752795611919729 0.0022100804223709252 0.010023963708608636 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 111893 14679 TIPEAFRGV True PC9_epitope_Rep2 988.5341804209198 988.53308993586 61.727 2 0.0975232984226717 0.0022100804223709252 0.010025011708709787 ['ENSG00000213719|ENST00000375784|CLIC1'] 138728 17846 YIPTELDQV True PC9_epitope_Rep6 1076.53899101784 1076.5378899358602 81.274 2 0.09751654442910773 0.0022100804223709252 0.010026531569607222 ['ENSG00000149100|ENST00000531120|EIF3M'] 31827 15405 GEIQSFPLP True H1975_Epitope_Rep2 986.5072969667399 986.50618993586 64.414 2 0.09751380428040043 0.0022100804223709252 0.010027148251898946 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 130120 13625 VSDPVGVLY True H1975_Epitope_Rep2 947.49639792987 947.4958449679301 57.547 1 0.09750645296188558 0.0022100804223709252 0.010028802876620072 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 2278 7914 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.43850993586 35.412 2 0.09749756851623065 0.0022100804223709252 0.010030802923132536 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 92371 17397 RLPETLPSL True PC9_epitope_Rep4 1024.59169529704 1024.5905899358602 74.912 2 0.09748981550646654 0.0022100804223709252 0.010032548574243806 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 111035 9815 THDEAVQVL True PC9_epitope_Rep2 1010.5032742154598 1010.50216993586 43.089 2 0.09748744999797081 0.0022100804223709252 0.010033081244781954 ['ENSG00000101400|ENST00000217381|SNTA1', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 71667 17146 MEALPLLAA True H1975_Epitope_Rep3 927.5099398190299 927.50939496793 71.584 1 0.09748693899557809 0.0022100804223709252 0.01003319631699691 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 35770 15516 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.51670993586 64.505 2 0.09748385018769562 0.0022100804223709252 0.010033891909949575 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 96162 14476 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65405490379 60.952 3 0.09747852998860143 0.0022100804223709252 0.010035090115312343 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 7776 6710 [Acetylation]-ASSDIQVK True H1975_Epitope_Rep3 888.4552617101799 888.45416993586 30.765 2 0.09747341331935418 0.0022100804223709252 0.010036242610826827 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1'] 4737 13368 ALDFIASK True PC9_epitope_Rep5 863.47526856247 863.47416993586 56.436 2 0.09747044412904475 0.0022100804223709252 0.01003691145897397 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 8726 21844 AVATDFFTV True PC9_epitope_Rep3 969.48074786573 969.47964993586 89.325 2 0.09746109332148313 0.0022100804223709252 0.010039018125980617 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 106554 5438 STMGYMAAK True NCI_RA007_Epitope_Rep4 958.4252242188999 958.42412993586 27.495 2 0.09745760292470962 0.0022100804223709252 0.010039804594375236 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 17983 5083 EIDKNDHLY True H1975_Epitope_Rep3 1145.53530261973 1145.53366490379 24.668 3 0.09745725929601388 0.0022100804223709252 0.01003988202517142 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 8976 13989 AVGKIFSNV True PC9_epitope_Rep1 933.52836676449 933.52726993586 58.647 2 0.0974538935153618 0.0022100804223709252 0.01004064047587185 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 96379 8019 RYVPRASYF True NCI_RA007_Epitope_Rep4 1157.5981776598098 1157.5970899358601 37.61 2 0.09745108681298759 0.0022100804223709252 0.0100412729847214 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 77039 8587 NRITDASAL True PC9_epitope_Rep4 959.5036085686299 959.50250993586 40.51 2 0.0974495173864977 0.0022100804223709252 0.010041626681877695 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 89405 14087 QYAPSTAQF True PC9_epitope_Rep2 1011.4661604307499 1011.46506993586 59.459 2 0.09744805352282479 0.0022100804223709252 0.010041956599356801 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 11863 16765 DHIHIIAL True PC9_epitope_Rep1 930.52870111766 930.52760993586 69.311 2 0.09744476960178973 0.0022100804223709252 0.010042696748891328 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 78445 17484 NYLSTMKNF True PC9_epitope_Rep5 1116.52738078832 1116.5262899358602 72.254 2 0.09744303320941149 0.0022100804223709252 0.010043088128302511 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 48422 22890 IYVPVSLGF True PC9_epitope_Rep1 993.55351888317 993.55242993586 92.843 2 0.0974363187745238 0.0022100804223709252 0.010044601685578358 ['ENSG00000172818|ENST00000335987|OVOL1'] 88138 4543 QRSGNVAEL True PC9_epitope_Rep6 972.4988575413598 972.49776993586 24.729 2 0.09743501377734122 0.0022100804223709252 0.010044895881230267 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 90061 5449 READGILKP True NCI_RA007_Epitope_Rep4 997.5556441414899 997.55454993586 27.539 2 0.09743237298730546 0.0022100804223709252 0.010045491240187896 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 68343 15545 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.57517496793 64.949 1 0.09742845405990953 0.0022100804223709252 0.010046374813791923 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 29863 12988 FVTFDDHD True PC9_epitope_Rep3 994.40322582102 994.40212993586 54.985 2 0.09742670688319485 0.0022100804223709252 0.010046768761601424 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 79236 6436 PAPPPPPPP True H1975_Epitope_Rep2 865.46978925921 865.46868993586 29.676 2 0.09742256732114211 0.0022100804223709252 0.01004770219561263 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 56124 8383 LAVDKSASL True PC9_epitope_Rep4 902.50729696674 902.50618993586 39.703 2 0.0974204074926377 0.0022100804223709252 0.010048189250356238 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 115067 7765 TRDEDHIAL True PC9_epitope_Rep5 1068.51998690876 1068.5188899358602 34.811 2 0.09741277174674091 0.0022100804223709252 0.010049911339047765 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 104426 11250 SQLGIFISK True NCI_RA007_Epitope_Rep4 991.5702315764701 991.56912993586 50.165 2 0.09740010898116873 0.0022100804223709252 0.010052767791359291 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 38860 4440 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 24.233 2 0.09739118595599862 0.0022100804223709252 0.010054781102392402 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 85977 17560 QHITLPVSV True PC9_epitope_Rep3 992.5654805492 992.56438993586 72.73 2 0.09738691843284183 0.0022100804223709252 0.010055744123838063 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 97508 4650 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 22.984 1 0.09738210247970899 0.0022100804223709252 0.010056831011224655 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 38845 4439 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 23.534 2 0.09738123323915014 0.0022100804223709252 0.010057027197538185 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 40748 2542 HRTELETKL True PC9_epitope_Rep6 1125.61422164677 1125.61258490379 14.706 3 0.0973805344774556 0.0022100804223709252 0.010057184909670063 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 27423 22118 FLYPFPLAL True H1975_Epitope_Rep1 1079.60555445603 1079.6044499358602 92.032 2 0.097379132943219 0.0022100804223709252 0.010057501246302674 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 122132 11811 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 50.507 1 0.09737747857067307 0.0022100804223709252 0.010057874662623601 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 88729 19211 QTIQDIVTV True PC9_epitope_Rep4 1015.5549754351499 1015.55386993586 81.995 2 0.09737450257676725 0.0022100804223709252 0.010058546421699573 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 41499 17404 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 72.114 2 0.09737321404806429 0.0022100804223709252 0.01005883728935189 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 88682 4802 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 23.56 2 0.09736943956294615 0.0022100804223709252 0.010059689373685862 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 140254 19540 YRAPELLL True PC9_epitope_Rep1 973.5596668927699 973.55856993586 79.983 2 0.09734874774527583 0.0022100804223709252 0.010064361743783423 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 72340 23748 M[Oxidation]IPLLLAAL True PC9_epitope_Rep3 969.5932759006099 969.5921699358599 96.632 2 0.09734700441875972 0.0022100804223709252 0.010064755494727611 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 138537 17617 YHVPVVVVP True PC9_epitope_Rep4 1007.5804023373499 1007.57930993586 75.786 2 0.097346766736743 0.0022100804223709252 0.01006480917916475 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 134780 16623 VYTVVDEMF True NCI_RA007_Epitope_Rep3 1101.5052483614097 1101.50467496793 73.169 1 0.09733765509327642 0.0022100804223709252 0.010066867401350123 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 1037 6236 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.41744993586 28.945 2 0.09733656972493036 0.0022100804223709252 0.010067112601134803 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 76583 5214 NQLKNTNTI True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 24.905 2 0.09732954923425889 0.0022100804223709252 0.01006869876508756 ['ENSG00000110367|ENST00000534980|DDX6', 'ENST00000533239.1_1_11:118656759-118656960:-|nuORF', 'ENST00000525082.1_1_11:118639020-118656960:-|nuORF'] 77554 12674 NTDNLLTEY True H1975_Epitope_Rep1 1081.49276910141 1081.49217496793 53.804 1 0.09732623016670566 0.0022100804223709252 0.010069448736584993 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 99359 16483 SHTDVVPVF True PC9_epitope_Rep5 999.50254593947 999.50144993586 68.4 2 0.09731471161537975 0.0022100804223709252 0.010072051864401268 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 86671 19377 QLIDIIHTA True PC9_epitope_Rep1 1022.5760452329 1022.57494993586 79.343 2 0.09729650684837157 0.0022100804223709252 0.010076167348280055 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 142115 22199 YVPPELITL True PC9_epitope_Rep1 1043.59029831471 1043.58920993586 90.208 2 0.09729234531760039 0.0022100804223709252 0.010077108355245576 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 61977 14982 LLDPAQTGFY True H1975_Epitope_Rep2 1123.55497543515 1123.5538699358601 62.779 2 0.09728851694297283 0.0022100804223709252 0.010077974102834654 ['ENST00000462139.1_1_1:247473617-247473770:-|nuORF', 'ENSG00000162714|ENST00000682384|ZNF496', 'nc|ENSG00000162714|Q96IT1-2|ZNF496'] 79239 6786 PAPPPPPPP True NCI_RA007_Epitope_Rep1 865.46978925921 865.46868993586 30.403 2 0.09725719391350561 0.0022100804223709252 0.01008506014924315 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 85802 4760 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 25.754 2 0.09724995275127543 0.0022100804223709252 0.010086698955909894 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 2570 10571 AEQTLSQLP True H1975_Epitope_Rep2 985.5080252427299 985.50692993586 45.684 2 0.09724389539109479 0.0022100804223709252 0.010088070041740898 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 108112 12618 SYDPDFNQL True NCI_RA007_Epitope_Rep3 1097.46655435357 1097.46544993586 56.878 2 0.09724369970362508 0.0022100804223709252 0.01008811433863948 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 90512 5937 RELPFTKSA True NCI_RA007_Epitope_Rep4 1047.57129420563 1047.57018993586 29.456 2 0.09722880671298748 0.0022100804223709252 0.010091486142770941 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 30444 6665 GAFGKPSSL True H1975_Epitope_Rep2 862.45486747106 862.45376993586 30.545 2 0.09722870944389246 0.0022100804223709252 0.010091508168229278 ['ENSG00000099812|ENST00000215582|MISP'] 125201 13109 VIIEKTYSL True PC9_epitope_Rep6 1064.61176203528 1064.6106699358602 62.041 2 0.09722731266154988 0.0022100804223709252 0.010091824458445748 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 64361 23126 LPLLIAPALAA True PC9_epitope_Rep5 1061.68486740589 1061.68376993586 93.941 2 0.09721423214399105 0.0022100804223709252 0.010094786896145196 ['ENSG00000168140|ENST00000304735|VASN'] 45713 15566 IRPENVIIY True PC9_epitope_Rep4 1115.6338944621898 1115.63278993586 67.795 2 0.0972080348487203 0.0022100804223709252 0.010096190731143435 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 2426 11125 AEQFSSLTP True H1975_Epitope_Rep2 978.4658260775799 978.46472993586 47.827 2 0.09720389960888964 0.0022100804223709252 0.010097127565029722 ['ENST00000366535.3_1_1:244615028-244615205:-|nuORF'] 133723 20356 VYDPLFSQL True PC9_epitope_Rep6 1080.54916177872 1080.5480699358602 90.998 2 0.09720197172519984 0.0022100804223709252 0.010097564353223823 ['ENSG00000100104|ENST00000215917|SRRD'] 6384 6541 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 30.133 2 0.09719911504117845 0.0022100804223709252 0.010098211606861715 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1033 8712 AEAEPPLPA True H1975_Epitope_Rep2 893.4494477374499 893.4488949679301 38.471 1 0.09719850801030198 0.0022100804223709252 0.010098349150076525 ['ENST00000532687.5_1_11:33061130-33065300:+|nuORF'] 91746 9200 RKFDEVVSL True NCI_RA007_Epitope_Rep4 1091.59750895347 1091.59640993586 42.233 2 0.09719607538818494 0.0022100804223709252 0.010098900360173217 ['ENSG00000197563|ENST00000640252|PIGN'] 76782 14677 NRADGNFLL True PC9_epitope_Rep4 1018.51959298594 1018.51848993586 64.391 2 0.09719332094279241 0.0022100804223709252 0.010099524527142393 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 124775 9774 VHDETCQVI True PC9_epitope_Rep5 1042.47534521546 1042.4742499358601 42.568 2 0.09719086415108091 0.0022100804223709252 0.01010008127578634 ['SLFN5|p.E282Kfs*34|1|0.15|ENSG00000166750|chr17:35259530-35259530|C/-|frameshift_variant', 'nc|ENSG00000166750|Q08AF3-2|SLFN5', 'ENSG00000166750|ENST00000299977|SLFN5', 'SLFN5|p.G240R|1|0.19|ENSG00000166750|chr17:35259408-35259408|G/C|missense_variant'] 54430 16028 KYFLWVVKF True NCI_RA007_Epitope_Rep1 1228.7008518231999 1228.6997499358602 66.449 2 0.09719079424373274 0.0022100804223709252 0.010100097118347707 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 43805 18966 IHSDVVFVV True PC9_epitope_Rep5 1013.55458151233 1013.55348993586 77.977 2 0.09719004779213673 0.0022100804223709252 0.01010026628237438 ['ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF', 'ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1'] 14018 20523 DRFSDIYAL True PC9_epitope_Rep1 1098.53457434374 1098.53346993586 83.754 2 0.09718332140863957 0.0022100804223709252 0.010101790765813922 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 12750 9112 DLEIATYR True H1975_Epitope_Rep1 979.4974605590301 979.49691496793 39.954 1 0.09717632438009319 0.0022100804223709252 0.010103376821743183 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 17846 5802 EHVASSPAL True PC9_epitope_Rep4 909.4555957470499 909.45448993586 29.173 2 0.09717516528914993 0.0022100804223709252 0.010103639582352811 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 107457 19424 SVLVSVSEV True PC9_epitope_Rep1 917.50696261357 917.50641496793 79.526 1 0.09715122018631575 0.0022100804223709252 0.010109069285685992 ['ENSG00000221926|ENST00000649191|TRIM16'] 97116 8813 SDKYGLGY True H1975_Epitope_Rep2 901.4181476091699 901.4175949679301 38.866 1 0.09714638569746857 0.0022100804223709252 0.010110165874139963 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 57622 11065 LEEEALYAA True H1975_Epitope_Rep2 1007.4811417885498 1007.48004993586 47.592 2 0.09712614980996485 0.0022100804223709252 0.010114757133679804 ['ENST00000510527.5_1_4:113153247-113186224:+|nuORF', 'ENSG00000138660|ENST00000274000|AP1AR'] 76423 14903 NQDTHLLYV True PC9_epitope_Rep2 1101.54547338061 1101.54436993586 62.589 2 0.09711645121599904 0.0022100804223709252 0.01011695832319707 ['ENSG00000182179|ENST00000333486|UBA7'] 33780 20121 GLLAVLRPL True PC9_epitope_Rep2 950.6276868829399 950.62658993586 82.804 2 0.09711513354705258 0.0022100804223709252 0.010117257416127507 ['ENSG00000168569|ENST00000307366|TMEM223'] 119993 3111 VDQLTNDK True NCI_RA007_Epitope_Rep2 931.46107505031 931.45996993586 16.72 2 0.097097586451365 0.0022100804223709252 0.010121241172069044 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 11958 11854 DHNGMLSV True PC9_epitope_Rep1 871.38580193507 871.38470993586 50.461 2 0.09709680775331095 0.0022100804223709252 0.010121417996269106 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 132236 17312 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 71.593 2 0.09709661874347426 0.0022100804223709252 0.010121460916447165 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 26185 15294 FHDGDSVVF True PC9_epitope_Rep5 1021.4505103666099 1021.44940993586 63.839 2 0.09709170772015809 0.0022100804223709252 0.010122576167898358 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 78235 11385 NYGHVYAVF True NCI_RA007_Epitope_Rep4 1068.5028802926397 1068.5017899358602 50.706 2 0.09707994124189419 0.0022100804223709252 0.010125248711346986 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 130083 10140 VSDKTLSFY True H1975_Epitope_Rep2 1058.52842633414 1058.52732993586 44.003 2 0.09707400489908069 0.0022100804223709252 0.010126597299955482 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 129260 20921 VQVEDIVFL True PC9_epitope_Rep6 1060.580461907 1060.57936993586 93.247 2 0.09706393750774021 0.0022100804223709252 0.0101288847510016 ['ENSG00000197780|ENST00000338366|TAF13'] 8156 8404 ATEPPTESLLK True NCI_RA007_Epitope_Rep4 1184.6288686514001 1184.6277699358602 39.142 2 0.09706240811416898 0.0022100804223709252 0.010129232293554969 ['nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 8162 3537 ATEQPLTAK True NCI_RA007_Epitope_Rep4 957.5131106231698 957.51200993586 19.608 2 0.09705124254339113 0.0022100804223709252 0.010131769925471431 ['ENSG00000120725|ENST00000394817|SIL1'] 120908 7519 VENPGGYVA True H1975_Epitope_Rep3 904.42904664604 904.4284949679301 33.902 1 0.09704772498609344 0.0022100804223709252 0.010132569496563257 ['TFRC|p.Y211S|1|0.26|ENSG00000072274|chr3:196071451-196071451|T/G|missense_variant', 'ENSG00000072274|ENST00000360110|TFRC'] 57955 6658 LEGPAAPSA True H1975_Epitope_Rep3 811.40758292547 811.40703496793 30.562 1 0.09704124113926234 0.0022100804223709252 0.010134043488501075 ['ENST00000287652.8_1_3:10290629-10291047:+|nuORF'] 141871 20781 YVDPVITSI True PC9_epitope_Rep1 1005.53826274185 1005.53716993586 84.764 2 0.09703707798025256 0.0022100804223709252 0.01013499001944321 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 1505 13096 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52317496793 55.464 1 0.09702973718988614 0.0022100804223709252 0.01013665921828475 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 108822 11742 SYVNHLYVI True NCI_RA007_Epitope_Rep3 1106.5760452329 1106.57494993586 53.299 2 0.09702945037930102 0.0022100804223709252 0.01013672444054687 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5', 'nc|ENSG00000136237|Q92565-2|RAPGEF5'] 8782 16953 AVDLTLPKV True PC9_epitope_Rep6 954.57498260374 954.57388993586 77.755 2 0.09702332414664439 0.0022100804223709252 0.010138117674200238 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 2286 11687 AENVPPVIP True H1975_Epitope_Rep1 934.5123823471799 934.51128993586 49.944 2 0.09701183769129253 0.0022100804223709252 0.010140730426915762 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 36000 7542 GTWNGTTKV True PC9_epitope_Rep1 962.48214484806 962.48104993586 33.828 2 0.09700562275228956 0.0022100804223709252 0.010142144368174637 ['ENSG00000176105|ENST00000314574|YES1'] 96341 10005 RYSSMAASF True PC9_epitope_Rep6 1018.4542158480599 1018.45310993586 49.045 2 0.09700367452503217 0.0022100804223709252 0.0101425876419382 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 98917 17060 SHADVVNLL True PC9_epitope_Rep3 966.51344497634 966.51234993586 70.774 2 0.09700097531467215 0.0022100804223709252 0.010143201814951656 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 73654 23994 MYIDPDLLAEL True PC9_epitope_Rep1 1291.6369908069498 1291.6358899358602 97.1 2 0.09699926477661916 0.0022100804223709252 0.010143591045769946 ['ENSG00000104611|ENST00000265807|SH2D4A'] 120175 4856 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 23.766 2 0.0969889906243594 0.0022100804223709252 0.010145929216079631 ['ENSG00000155506|ENST00000518297|LARP1'] 21663 17948 ERSDTFINL True PC9_epitope_Rep5 1093.54038800017 1093.53928993586 74.053 2 0.09698282599521212 0.0022100804223709252 0.010147332396283378 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 79272 8676 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 38.315 2 0.09697830924809007 0.0022100804223709252 0.010148360606415347 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 115287 17377 TRFAEVECL True PC9_epitope_Rep5 1066.5117307241799 1066.5106299358602 71.841 2 0.0969767304487877 0.0022100804223709252 0.010148720033945378 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 28371 13831 FRVKYETEL True PC9_epitope_Rep5 1183.62372370131 1183.62208490379 58.221 3 0.09697641010392505 0.0022100804223709252 0.010148792964748583 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 135090 8067 WEDFKQNTP True H1975_Epitope_Rep3 1163.5247379360299 1163.52364993586 36.003 2 0.09697479814879956 0.0022100804223709252 0.010149159955529698 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 72021 8058 METDPQTISA True H1975_Epitope_Rep1 1091.48049016555 1091.47997496793 35.939 1 0.09696837337921368 0.0022100804223709252 0.010150622796414726 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 117657 14090 TVTNAVVTV True PC9_epitope_Rep5 902.50729696674 902.50618993586 59.208 2 0.09696482258212435 0.0022100804223709252 0.010151431355418334 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 38319 9384 HEGPVWQV True H1975_Epitope_Rep1 950.46101548066 950.45990993586 41.006 2 0.09696424587142259 0.0022100804223709252 0.010151562685145492 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 120609 5518 VEHSDLSFSK True NCI_RA007_Epitope_Rep1 1147.5509526838698 1147.54930490379 25.535 3 0.09695458854273328 0.0022100804223709252 0.01015376211225826 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 139133 15167 YLDQMEDLY True H1975_Epitope_Rep1 1188.50089125696 1188.50037496793 63.6 1 0.09694779672058891 0.0022100804223709252 0.010155309201115856 ['ENSG00000198356|ENST00000357332|GET3'] 1600 6271 AEFAEVSK True PC9_epitope_Rep5 879.43379767331 879.43270993586 29.098 2 0.09694560739792331 0.0022100804223709252 0.010155807948276094 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 71999 6166 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 28.731 1 0.09693621450199527 0.0022100804223709252 0.010157947998482212 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 27258 22598 FLPSYIIDV True PC9_epitope_Rep2 1065.57464825057 1065.57354993586 92.423 2 0.09693572906584033 0.0022100804223709252 0.010158058610533184 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 107217 11561 SVIQNLRTV True PC9_epitope_Rep6 1028.5978433066398 1028.59674993586 55.575 2 0.09692366871154189 0.0022100804223709252 0.010160807065688195 ['ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1', 'PSMD1|p.V724Gfs*18|1|0.09|ENSG00000173692|chr2:231153616-231153620|ATGTC/-|frameshift_variant'] 6865 9231 AQHSVELTL True NCI_RA007_Epitope_Rep4 996.52400966004 996.52290993586 42.358 2 0.09692047895536547 0.0022100804223709252 0.01016153410332624 ['ENSG00000090989|ENST00000381295|EXOC1', 'nc|ENSG00000090989|Q9NV70-2|EXOC1'] 9439 21847 AVVEFLTSV True PC9_epitope_Rep3 963.5276980581499 963.52660993586 89.337 2 0.09691470958204751 0.0022100804223709252 0.0101628492362605 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 40162 12287 HQDPQSIFV True PC9_epitope_Rep6 1069.51925863277 1069.5181699358602 58.647 2 0.09691295711901984 0.0022100804223709252 0.010163248743639936 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 32069 5924 GESDRVFAT True H1975_Epitope_Rep2 980.45632402304 980.45522993586 27.771 2 0.09690681386266731 0.0022100804223709252 0.010164649334363833 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 117273 15489 TVMDEIHTV True PC9_epitope_Rep1 1043.49574630687 1043.49464993586 64.4 2 0.09690533184257277 0.0022100804223709252 0.010164987245191947 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 109751 5035 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 24.488 2 0.09690338184876118 0.0022100804223709252 0.010165431873579088 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 32766 9913 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.46030993586 43.102 2 0.09690243257365078 0.0022100804223709252 0.010165648329520296 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 43795 12300 IHQAMVTSL True PC9_epitope_Rep1 998.52190148506 998.52080993586 52.167 2 0.09689903998062174 0.0022100804223709252 0.010166421952468998 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'ENST00000504883.1_1_5:61602296-61648542:+|nuORF'] 6130 13817 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 61.044 2 0.0968972920623958 0.0022100804223709252 0.010166820557301936 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 41213 20093 HVLDTLIQL True PC9_epitope_Rep4 1050.60734536118 1050.6062499358602 85.42 2 0.09687990249649787 0.0022100804223709252 0.010170786980575905 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 90801 5975 RESNNMVVP True NCI_RA007_Epitope_Rep5 1044.5022286696399 1044.50112993586 29.666 2 0.09687569565698681 0.0022100804223709252 0.010171746749183322 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 97694 5752 SEIDM[Oxidation]SVKA True H1975_Epitope_Rep1 994.46411220586 994.46300993586 27.195 2 0.09687401526277443 0.0022100804223709252 0.010172130146536226 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 7610 16190 ASFNDTFVHV True PC9_epitope_Rep6 1135.5298233164701 1135.5287299358602 74.63 2 0.09687061430389218 0.0022100804223709252 0.010172906148658173 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 76864 14806 NRDGNIVFV True PC9_epitope_Rep5 1032.5352430500798 1032.5341499358601 61.951 2 0.09686725782136552 0.0022100804223709252 0.010173672057873699 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 46559 22342 ITAFDLTDV True PC9_epitope_Rep2 993.5018772331299 993.50132496793 91.425 1 0.09686622286750668 0.0022100804223709252 0.010173908233068985 ['ENSG00000100228|ENST00000263116|RAB36', 'nc|ENSG00000100228|O95755-2|RAB36'] 99024 10031 SHEEAITAL True PC9_epitope_Rep2 969.4767251144499 969.47562993586 43.909 2 0.09686397218805198 0.0022100804223709252 0.010174421853389567 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'BTF3L4-INADL|1|fusion', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 134338 6630 VYPDGIRHI True NCI_RA007_Epitope_Rep5 1068.5716285587998 1068.5705299358601 32.167 2 0.0968552843539079 0.0022100804223709252 0.010176404707961335 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 134837 13106 VYVDLGGSHVF True NCI_RA007_Epitope_Rep5 1191.5924235730301 1191.5913299358601 57.092 2 0.09684179992473116 0.0022100804223709252 0.01017948303571573 ['ENSG00000165733|ENST00000374518|BMS1'] 104516 19731 SQNDGFFAV True PC9_epitope_Rep4 983.4348603024699 983.43376993586 84.018 2 0.09683972264571773 0.0022100804223709252 0.01017995733162318 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 137324 10504 YDGIILPGK True NCI_RA007_Epitope_Rep2 974.54368247546 974.54258993586 45.452 2 0.09683941160222877 0.0022100804223709252 0.010180028352617377 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 103934 17048 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51289496793 70.827 1 0.09682312671246451 0.0022100804223709252 0.010183747364037344 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 1922 5284 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5971499358602 25.407 2 0.09681020381719983 0.0022100804223709252 0.010186699511993318 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 89569 19787 QYMKIISSF True PC9_epitope_Rep3 1115.5685173243098 1115.56740993586 81.341 2 0.09680745318361363 0.0022100804223709252 0.010187327980910793 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 40871 13591 HSEVVAIL True PC9_epitope_Rep4 866.4861675993399 866.48506993586 60.171 2 0.09680114296264347 0.0022100804223709252 0.01018876988939135 ['ENSG00000092148|ENST00000399332|HECTD1'] 70998 18366 LYIGHLTTL True PC9_epitope_Rep4 1029.58588164061 1029.58478993586 78.711 2 0.09680031317000401 0.0022100804223709252 0.01018895951450533 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'ENST00000542302.6_1_12:1519571-1599393:+|nuORF'] 86013 12776 QHNDLEFKL True PC9_epitope_Rep4 1142.57202248162 1142.57038490379 57.006 3 0.09680008975274207 0.0022100804223709252 0.010189010570635173 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 26934 18177 FLDPRPLTV True PC9_epitope_Rep2 1056.59678067748 1056.59568993586 75.223 2 0.09679640207581852 0.0022100804223709252 0.010189853327288062 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 43062 11034 IEVGICNEA True H1975_Epitope_Rep2 946.44298245802 946.44243496793 47.473 1 0.09679065469628856 0.0022100804223709252 0.010191166926876617 ['ENSG00000106588|ENST00000223321|PSMA2'] 74748 8394 NHAPSVQI True PC9_epitope_Rep3 864.44536541652 864.44426993586 37.253 2 0.0967799494500429 0.0022100804223709252 0.010193614108316438 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 104864 4782 SRAPSVATV True PC9_epitope_Rep6 886.4872302285 886.48612993586 25.856 2 0.09677335042490229 0.0022100804223709252 0.010195122901191112 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 45801 7977 ISDAPAPAY True H1975_Epitope_Rep3 903.43379767331 903.43324496793 35.655 1 0.0967622338502473 0.0022100804223709252 0.010197665062311675 ['ENSG00000168476|ENST00000306306|REEP4'] 141223 5218 YTAPPLQSK True NCI_RA007_Epitope_Rep5 1003.53384606775 1003.53274993586 26.767 2 0.09674854207886407 0.0022100804223709252 0.010200796955111727 ['ENSG00000155008|ENST00000373173|APOOL'] 127651 9903 VPAGGAVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 43.423 1 0.0967466393840989 0.0022100804223709252 0.010201232255207355 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 126306 19919 VLIENVASL True PC9_epitope_Rep4 956.5542471591599 956.55314993586 84.753 2 0.09674597273851039 0.0022100804223709252 0.0102013847751298 ['ENSG00000176153|ENST00000389614|GPX2'] 40211 9526 HQGPATTVAF True PC9_epitope_Rep4 1027.50869394907 1027.50758993586 44.252 2 0.09674064788120831 0.0022100804223709252 0.010202603111903881 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 69099 10661 LTREENTAI True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 45.996 2 0.09673944424941834 0.0022100804223709252 0.010202878524205095 ['ENSG00000139618|ENST00000380152|BRCA2'] 47082 21571 ITTDVLYTI True PC9_epitope_Rep1 1037.5644774896898 1037.5633899358602 87.793 2 0.09673524182608437 0.0022100804223709252 0.010203840168763495 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 9435 22064 AVVDSILAI True PC9_epitope_Rep2 899.53278343859 899.5322349679301 90.341 1 0.09673273636183084 0.0022100804223709252 0.010204413537656738 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 41617 17110 IADSNYNWFY True H1975_Epitope_Rep2 1291.55095268387 1291.54984993586 71.088 2 0.0967221540778869 0.0022100804223709252 0.010206835604251225 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant', 'DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE'] 124889 19227 VHNLLLTYL True PC9_epitope_Rep6 1084.62808080576 1084.6269899358601 86.608 2 0.09671156299953092 0.0022100804223709252 0.010209260232346815 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1'] 96343 6409 RYSSM[Oxidation]AASF True PC9_epitope_Rep2 1034.44913084806 1034.4480299358602 30.06 2 0.09670790535536228 0.0022100804223709252 0.010210097708680607 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 134849 18125 VYVEKISFL True PC9_epitope_Rep6 1096.6168474157198 1096.61574993586 82.354 2 0.09669887563007006 0.0022100804223709252 0.010212165489578446 ['ENSG00000171017|ENST00000306708|LRRC8E'] 126301 20877 VLIENVASL True PC9_epitope_Rep1 956.5542471591599 956.55314993586 85.123 2 0.09669411727037427 0.0022100804223709252 0.010213255300729324 ['ENSG00000176153|ENST00000389614|GPX2'] 39 17334 AAAAVIPTV True PC9_epitope_Rep3 811.48035394291 811.47924993586 71.849 2 0.09669326619297991 0.0022100804223709252 0.010213450235391826 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 107171 22002 SVIIPGMTL True PC9_epitope_Rep3 929.52558988317 929.52448993586 89.929 2 0.096691093185859 0.0022100804223709252 0.010213947966976826 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 103955 15583 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51234993586 72.15 2 0.0966863485409387 0.0022100804223709252 0.010215034817643544 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 84857 10656 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 46.062 2 0.09668293641223898 0.0022100804223709252 0.010215816498403852 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 40213 8919 HQGPATTVAF True PC9_epitope_Rep6 1027.50869394907 1027.50758993586 44.279 2 0.0966801414048508 0.0022100804223709252 0.010216456846008214 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 11543 9395 DFQVNLNNASR True H1975_Epitope_Rep1 1276.61601255192 1276.6149099358602 41.049 2 0.09667729897227424 0.0022100804223709252 0.01021710809815255 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 17845 5939 EHVASSPAL True PC9_epitope_Rep2 909.4555957470499 909.45448993586 28.234 2 0.09667167952766684 0.0022100804223709252 0.010218395729863558 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 133357 20837 VVVGDLVEV True PC9_epitope_Rep3 927.5276980581499 927.52660993586 85.421 2 0.09666822140208685 0.0022100804223709252 0.010219188196817502 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 39226 18742 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 76.88 2 0.0966656610723335 0.0022100804223709252 0.010219774961866622 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 28369 11708 FRVKYETEL True PC9_epitope_Rep4 1183.62372370131 1183.62208490379 52.797 3 0.09666085434915872 0.0022100804223709252 0.010220876632156645 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 43754 21559 IHINIGALEL True PC9_epitope_Rep1 1091.63389446219 1091.63278993586 87.748 2 0.09665492583796319 0.0022100804223709252 0.01022223556499945 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF'] 40271 18425 HQLESILAM True PC9_epitope_Rep2 1040.5324661687598 1040.53136993586 76.203 2 0.09664278744930303 0.0022100804223709252 0.010225018462693419 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 97832 11834 SELPGAFEA True H1975_Epitope_Rep1 919.4287122928699 919.42816496793 50.517 1 0.09664205018139796 0.0022100804223709252 0.010225187515071945 ['ENSG00000126247|ENST00000246533|CAPNS1'] 98970 6489 SHDAAGAAVL True PC9_epitope_Rep2 910.45084471978 910.44974993586 30.374 2 0.09663829997825847 0.0022100804223709252 0.01022604746185569 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 132522 10430 VVDPNDPQM True PC9_epitope_Rep2 1013.44879611445 1013.44768993586 45.439 2 0.09663365363484987 0.0022100804223709252 0.010227112995228913 ['ENSG00000151883|ENST00000281631|PARP8'] 64487 17632 LPQLPITNF True H1975_Epitope_Rep1 1041.58588164061 1041.58537496793 73.364 1 0.09662167352910173 0.0022100804223709252 0.010229860848670242 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 74895 8111 NHHMQSISF True PC9_epitope_Rep4 1099.4869129586702 1099.48580993586 38.653 2 0.09662008811301089 0.0022100804223709252 0.010230224545176997 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 98204 7211 SETKIFTA True NCI_RA007_Epitope_Rep1 895.4650978015899 895.46400993586 32.039 2 0.09661974471300447 0.0022100804223709252 0.010230303323207348 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 111904 14177 TIPEAFRGV True PC9_epitope_Rep4 988.5341804209198 988.53308993586 62.435 2 0.0966191578421327 0.0022100804223709252 0.010230437956259409 ['ENSG00000213719|ENST00000375784|CLIC1'] 6739 7826 AQATISFPK True NCI_RA007_Epitope_Rep3 961.5232813840499 961.52218993586 37.902 2 0.09661820007040489 0.0022100804223709252 0.010230657680674894 ['ENSG00000094804|ENST00000209728|CDC6'] 127680 10313 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 44.614 2 0.09661021990058881 0.0022100804223709252 0.010232488602986447 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 73585 9401 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep1 1074.57433136118 1074.5732299358601 41.02 2 0.09660363864929404 0.0022100804223709252 0.01023399880078398 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 110762 10542 TGHLEEVVL True NCI_RA007_Epitope_Rep2 995.52876068731 995.52766993586 45.603 2 0.09660103756083732 0.0022100804223709252 0.010234595730352309 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 134277 5962 VYNNNSSRF True PC9_epitope_Rep3 1099.50467119779 1099.50356993586 27.99 2 0.09659626704389652 0.0022100804223709252 0.010235690613121514 ['ENSG00000145555|ENST00000513610|MYO10'] 30319 8536 GAAKDLPGV True PC9_epitope_Rep5 826.4548674710599 826.45376993586 37.776 2 0.09659543197226805 0.0022100804223709252 0.010235882282140608 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 8924 14219 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6965849037902 59.779 3 0.09659376251043329 0.0022100804223709252 0.010236265474030644 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 125401 9854 VISLEGKPL True H1975_Epitope_Rep3 954.5749826037398 954.57388993586 42.933 2 0.09659305736051 0.0022100804223709252 0.010236427331332405 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65622809-65623088:-|nuORF'] 106937 13584 SVDSNLLSDY True H1975_Epitope_Rep2 1111.50333378511 1111.5022299358602 57.387 2 0.09659164668321624 0.0022100804223709252 0.010236751139894215 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant', 'OSGIN2|p.I403Yfs*8|1|0.12|ENSG00000164823|chr8:89925217-89925217|G/-|frameshift_variant'] 1981 12063 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47511496793 51.482 1 0.09659082816979518 0.0022100804223709252 0.010236939026924075 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 134407 22752 VYPGLAVFF True PC9_epitope_Rep4 1011.5429541994698 1011.5423749679301 95.735 1 0.09658958840285053 0.0022100804223709252 0.010237223617556267 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 76384 13239 NQAKYIPEL True PC9_epitope_Rep6 1074.57095985246 1074.5698699358602 62.573 2 0.09658136757481758 0.0022100804223709252 0.010239110913528505 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 115219 6633 TRDSVKTVL True PC9_epitope_Rep3 1017.58185888933 1017.58076993586 30.537 2 0.09658110260221853 0.0022100804223709252 0.010239171750108576 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 125196 15358 VIIEKTYSL True PC9_epitope_Rep1 1064.61176203528 1064.6106699358602 63.892 2 0.09657317035770906 0.0022100804223709252 0.010240993119180999 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 33155 11147 GIVEFASK True PC9_epitope_Rep1 849.45961849833 849.45852993586 47.76 2 0.09656448725228954 0.0022100804223709252 0.01024298725180687 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 78072 21405 NVVEQFLQA True PC9_epitope_Rep2 1046.53965972418 1046.53856993586 87.805 2 0.09656334035246446 0.0022100804223709252 0.010243250672607108 ['ENSG00000121060|ENST00000316881|TRIM25'] 97577 7985 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 35.663 2 0.09656031427457362 0.0022100804223709252 0.010243945735404993 ['nc|ENSG00000128951|P33316-2|DUT'] 6159 9673 APM[Oxidation]PPIIHA True PC9_epitope_Rep6 961.50552352537 961.50442993586 47.581 2 0.09655869622774539 0.0022100804223709252 0.010244317404609096 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 111252 20614 THLEGVLLL True PC9_epitope_Rep1 993.5858816406098 993.58478993586 84.109 2 0.09655690129763923 0.0022100804223709252 0.010244729719357724 ['ENSG00000204839|ENST00000398882|MROH6'] 53324 18793 KQMEQISQFL True PC9_epitope_Rep2 1250.6329084860197 1250.63180993586 77.657 2 0.09654676422810593 0.0022100804223709252 0.010247058610129279 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 45834 6485 ISDLAQHY True H1975_Epitope_Rep2 945.4555957470502 945.45448993586 29.861 2 0.09654383127237895 0.0022100804223709252 0.01024773252159703 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 3944 11568 AHDGGIYAL True PC9_epitope_Rep2 915.44503106335 915.44392993586 49.821 2 0.09651740176165206 0.0022100804223709252 0.010253807191843791 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 89728 9252 RADEHILEL True NCI_RA007_Epitope_Rep4 1094.57202248162 1094.57092993586 42.44 2 0.09651171844491062 0.0022100804223709252 0.010255113917556841 ['ENSG00000283632|ENST00000413988|EXOC3L2'] 48859 8256 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54806993586 36.71 2 0.09649558972474692 0.0022100804223709252 0.010258823146885204 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 114628 19408 TQDTPIPAL True PC9_epitope_Rep3 954.5022115862998 954.50110993586 79.878 2 0.0964886157470972 0.0022100804223709252 0.010260427394911141 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 90360 12967 REGDLLFTVA True NCI_RA007_Epitope_Rep3 1119.5924235730301 1119.5913299358601 58.28 2 0.09648720061801587 0.0022100804223709252 0.0102607529510873 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 49369 11546 KESYSIYVYK True PC9_epitope_Rep1 1278.6496040959798 1278.6479549037902 49.29 3 0.09647767968408931 0.0022100804223709252 0.010262943536400495 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 132822 16732 VVLGEFGVRNV True PC9_epitope_Rep6 1187.6662572196299 1187.6651699358601 76.844 2 0.09646906417218837 0.0022100804223709252 0.010264926185458031 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 96837 6334 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42828993586 29.175 2 0.0964687002069505 0.0022100804223709252 0.010265009951177928 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 35066 9223 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 40.423 2 0.09646157060192595 0.0022100804223709252 0.010266650943898122 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 74863 13508 NHHLFTTTI True PC9_epitope_Rep1 1082.5508931142201 1082.5497899358602 56.814 2 0.09645877323171978 0.0022100804223709252 0.010267294871707276 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 90349 12861 REFPTVPLV True NCI_RA007_Epitope_Rep5 1056.59678067748 1056.59568993586 56.154 2 0.09645578005638675 0.0022100804223709252 0.010267983914599077 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 86077 16163 QHSITPLAL True PC9_epitope_Rep5 978.5498304850599 978.54872993586 67.16 2 0.09645446612257995 0.0022100804223709252 0.010268286402192989 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 26254 15386 FHEGDVITL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 71.33 2 0.09644496354079306 0.0022100804223709252 0.010270474294170912 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 111763 21556 TIITTLENL True PC9_epitope_Rep4 1016.57537652656 1016.57426993586 91.095 2 0.09644419962966023 0.0022100804223709252 0.010270650197769711 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 74263 5505 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.5074749679301 26.187 1 0.09643870056921265 0.0022100804223709252 0.010271916535168665 ['ENSG00000167658|ENST00000309311|EEF2'] 107207 14713 SVIPQIQKV True PC9_epitope_Rep5 1010.6124307416198 1010.61132993586 61.592 2 0.0964380337823203 0.0022100804223709252 0.010272070094635748 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 105681 16638 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.5113499358602 69.506 2 0.09643318814841162 0.0022100804223709252 0.010273186098539945 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 4485 17835 AIVKEIVNI True PC9_epitope_Rep5 997.6171817688898 997.61608993586 73.621 2 0.09643040629509057 0.0022100804223709252 0.010273826842799861 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 12074 20255 DHTVGFIL True PC9_epitope_Rep3 900.4705175351999 900.46942993586 83.171 2 0.09641439418158201 0.0022100804223709252 0.010277515653260594 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 128729 8223 VPYEIQKGQA True PC9_epitope_Rep3 1131.59242357303 1131.5913299358601 36.608 2 0.09640794233557631 0.0022100804223709252 0.010279002361936676 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 136820 9639 YAAQENLEY True H1975_Epitope_Rep2 1099.48220441771 1099.48110993586 42.055 2 0.09640240060581597 0.0022100804223709252 0.010280279514738 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 141955 19256 YVIEDDVNM True PC9_epitope_Rep1 1096.47467650912 1096.47417496793 78.868 1 0.09640118935663353 0.0022100804223709252 0.010280558680618133 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 90805 5671 RESPFSTSA True NCI_RA007_Epitope_Rep4 980.45632402304 980.45522993586 28.42 2 0.09640022846378107 0.0022100804223709252 0.010280780150094582 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 44967 12449 IPAGTVTVNAA True PC9_epitope_Rep5 1012.55530978832 1012.55420993586 52.886 2 0.0963975130918077 0.0022100804223709252 0.010281406021773278 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 93586 5464 RQNKLTYTM True NCI_RA007_Epitope_Rep4 1153.59137802721 1153.59028993586 27.6 2 0.0963876058033546 0.0022100804223709252 0.010283689880979018 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 38851 6103 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 28.463 2 0.09638730588244399 0.0022100804223709252 0.01028375902722555 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 116580 20748 TTYPNTYIF True PC9_epitope_Rep2 1118.5284263341398 1118.52732993586 85.247 2 0.09638702919735935 0.0022100804223709252 0.01028382281688548 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 87501 12445 QQGPVGVNV True PC9_epitope_Rep1 896.4715801643599 896.47048993586 52.735 2 0.09638176742944608 0.0022100804223709252 0.010285035987596412 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.T950P|1|0.48|ENSG00000196924|chrX:154361766-154361766|T/G|missense_variant'] 134294 22700 VYNPVIYVF True PC9_epitope_Rep2 1112.5906326678798 1112.5895299358601 92.811 2 0.09637992222667383 0.0022100804223709252 0.010285461455978178 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 134360 6891 VYPERSTSY True PC9_epitope_Rep1 1100.51383889916 1100.51274993586 31.31 2 0.09637353547466017 0.0022100804223709252 0.010286934248022054 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 103888 16726 SQADVIPAV True PC9_epitope_Rep2 898.4759968384599 898.47488993586 69.584 2 0.09637176602145932 0.0022100804223709252 0.0102873423214226 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 26184 13815 FHDGDSVVF True PC9_epitope_Rep4 1021.4505103666099 1021.44940993586 61.035 2 0.09637163259641066 0.0022100804223709252 0.01028737309269127 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 1503 11571 AEELSTALP True H1975_Epitope_Rep2 929.4705771048499 929.47002496793 49.572 1 0.09636743191106653 0.0022100804223709252 0.01028834192427143 ['ENSG00000115207|ENST00000264720|GTF3C2', 'nc|ENSG00000115207|Q8WUA4-2|GTF3C2'] 110292 6916 TESQALVSA True H1975_Epitope_Rep2 904.4501760134399 904.44962496793 31.523 1 0.09634875796596348 0.0022100804223709252 0.010292649870876741 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 42866 2759 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 14.696 2 0.09634652356968522 0.0022100804223709252 0.010293165445347915 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 2053 7729 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 34.682 2 0.09634560054881917 0.0022100804223709252 0.01029337843444314 ['ENSG00000173801|ENST00000393931|JUP'] 21138 5148 ERAPGETAL True PC9_epitope_Rep6 942.4770594676199 942.47596993586 27.524 2 0.09634171353887819 0.0022100804223709252 0.010294275416612505 ['ENSG00000092148|ENST00000399332|HECTD1'] 84392 13705 QAALEFHGV True PC9_epitope_Rep2 970.4872302284999 970.48612993586 58.007 2 0.09633464443725791 0.0022100804223709252 0.010295906902034493 ['ENSG00000187231|ENST00000428443|SESTD1'] 5977 13022 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 55.094 2 0.09633370380712794 0.0022100804223709252 0.01029612400962448 ['ENSG00000183856|ENST00000361170|IQGAP3'] 10118 19518 AYVGDLQTL True PC9_epitope_Rep2 978.5022115863 978.5016649679301 80.46 1 0.09633061788428134 0.0022100804223709252 0.01029683630456419 ['ENSG00000065802|ENST00000264607|ASB1'] 89469 11724 QYFPKAPEF True NCI_RA007_Epitope_Rep4 1125.5494961318898 1125.54838993586 52.065 2 0.09632867950769433 0.0022100804223709252 0.010297283746054242 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 121889 8238 VFPSIVGRPR True NCI_RA007_Epitope_Rep1 1126.6611122695397 1126.65946490379 36.043 3 0.09632440517479525 0.0022100804223709252 0.010298270469059994 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTA1|p.H42L|1|0.34|ENSG00000143632|chr1:229432991-229432991|T/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 128764 18146 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 74.589 2 0.0963106389431884 0.0022100804223709252 0.010301448994204864 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 121840 10602 VFPEKGYSF True NCI_RA007_Epitope_Rep5 1072.5229470308798 1072.52184993586 47.418 2 0.0963034467841378 0.0022100804223709252 0.010303109984362869 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 73293 12903 MTDGGLNLY True H1975_Epitope_Rep2 982.44298245802 982.44243496793 54.743 1 0.09629234812803356 0.0022100804223709252 0.01030567365952617 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant', 'NAV3|p.R1152Efs*27|1|0.47|ENSG00000067798|chr12:78119649-78119649|C/-|frameshift_variant'] 21257 20293 ERDRLILFL True PC9_epitope_Rep2 1173.6869926642098 1173.6853349037901 83.479 3 0.09629228227210321 0.0022100804223709252 0.010305688873380894 ['ENSG00000138246|ENST00000260818|DNAJC13'] 75014 9718 NHSDYNM[Oxidation]VL True PC9_epitope_Rep1 1107.46550918819 1107.4644099358602 42.239 2 0.09628909171880254 0.0022100804223709252 0.010306425971802277 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 62930 15617 LLPDNVHYV True PC9_epitope_Rep3 1068.5603951687601 1068.55928993586 65.219 2 0.09628712087827036 0.0022100804223709252 0.010306881310852877 ['ENSG00000039123|ENST00000230640|MTREX'] 16879 7029 EFHLNESGD True NCI_RA007_Epitope_Rep4 1046.43050319802 1046.4294099358601 33.664 2 0.09628171643939731 0.0022100804223709252 0.010308130039927378 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 129686 11584 VRPPVQVY True PC9_epitope_Rep1 956.5443511817998 956.54324993586 49.435 2 0.09628116371560254 0.0022100804223709252 0.010308257758307337 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 76689 19449 NQSELAVLL True PC9_epitope_Rep6 985.5444107514498 985.54330993586 87.474 2 0.09628013231002866 0.0022100804223709252 0.010308496090144082 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 130222 9824 VSEVSSLNY True H1975_Epitope_Rep3 996.4763907612801 996.47528993586 42.815 2 0.09626772244203542 0.0022100804223709252 0.01031136410951291 ['ENSG00000117000|ENST00000372771|RLF'] 140870 13150 YSDVMLENY True H1975_Epitope_Rep3 1132.47467650912 1132.47356993586 55.83 2 0.09626305036262822 0.0022100804223709252 0.010312444061244885 ['ENSG00000130818|ENST00000253115|ZNF426', 'ENSG00000198028|ENST00000301480|ZNF560'] 77593 17462 NTDSLDWALY True H1975_Epitope_Rep2 1196.5349682665599 1196.53437496793 72.459 1 0.09626227975721043 0.0022100804223709252 0.010312622197134195 ['ENSG00000108561|ENST00000225698|C1QBP'] 134615 20422 VYSLQQFGF True PC9_epitope_Rep6 1087.53384606775 1087.53274993586 91.257 2 0.09625798417113729 0.0022100804223709252 0.01031361523380555 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 14892 13504 DYAETVHQL True PC9_epitope_Rep3 1074.49818883502 1074.49708993586 56.994 2 0.09625292757112963 0.0022100804223709252 0.0103147843154155 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 32757 10071 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.4608649679301 43.609 1 0.0962527501232895 0.0022100804223709252 0.0103148253434976 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 117717 15055 TVVAQLKQL True PC9_epitope_Rep3 998.6124307416198 998.61132993586 63.039 2 0.09625164222887614 0.0022100804223709252 0.010315081505571703 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 115063 7857 TRDEDHIAL True PC9_epitope_Rep3 1068.51998690876 1068.5188899358602 35.208 2 0.09624680737458545 0.0022100804223709252 0.01031619946850768 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 1834 12482 AEIDAHLVALA True H1975_Epitope_Rep3 1121.60807363717 1121.6069699358602 53.205 2 0.09623628038164429 0.0022100804223709252 0.01031863402345065 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 97473 11541 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.45890993586 49.519 2 0.09623479015336976 0.0022100804223709252 0.010318978709550022 ['ENSG00000135900|ENST00000258383|MRPL44'] 104345 18393 SQISDTSVVL True PC9_epitope_Rep1 1047.5448046742702 1047.54370993586 75.539 2 0.09623315364268867 0.0022100804223709252 0.010319357243043326 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 10054 13675 AYSRVQYQF True PC9_epitope_Rep3 1160.5614577979202 1160.56036993586 57.668 2 0.09623296863031786 0.0022100804223709252 0.010319400038206151 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 114855 16068 TQNPNYYNL True PC9_epitope_Rep3 1125.5090878718902 1125.50798993586 66.955 2 0.09623187085607918 0.0022100804223709252 0.010319653967554236 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 125003 19229 VIAEILRGV True PC9_epitope_Rep2 968.6018660579199 968.60076993586 79.338 2 0.09622395719678038 0.0022100804223709252 0.010321484675204612 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 111002 18060 THATQLLVL True PC9_epitope_Rep1 994.58113061334 994.58002993586 74.26 2 0.09621977196795113 0.0022100804223709252 0.010322452990863462 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'IGSF9|p.R978Gfs*9|1|0.16|ENSG00000085552|chr1:159928456-159928456|T/-|frameshift_variant', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 142853 14520 YYTDIM[Oxidation]HTL True PC9_epitope_Rep2 1171.5219614351497 1171.5208699358602 61.123 2 0.09621705279208387 0.0022100804223709252 0.010323082159488857 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 90182 3018 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 15.928 2 0.09621301362500571 0.0022100804223709252 0.010324016817891444 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 97805 4913 SELEMAKA True NCI_RA007_Epitope_Rep5 877.4215187374499 877.4204299358599 25.594 2 0.09619997417300291 0.0022100804223709252 0.01032703468161706 ['ENSG00000267796|ENST00000301159|LIN37'] 60529 11313 LHDINAQL True PC9_epitope_Rep5 922.4872302285 922.48612993586 48.508 2 0.09619467354823195 0.0022100804223709252 0.010328261703702612 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 96384 12640 RYVPRASYF True PC9_epitope_Rep5 1157.5981776598098 1157.5970899358601 53.622 2 0.09619203519066576 0.0022100804223709252 0.010328872499134074 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 40377 6265 HQSSVGSVL True NCI_RA007_Epitope_Rep4 912.46649478392 912.46538993586 30.702 2 0.09618754981103722 0.0022100804223709252 0.010329910970106649 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant', 'UTRN|p.Q931Rfs*4|1|0.33|ENSG00000152818|chr6:144461278-144461278|C/-|frameshift_variant'] 99121 14429 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 60.324 2 0.09617310683399552 0.0022100804223709252 0.010333255535072106 ['ENSG00000132646|ENST00000379143|PCNA'] 61425 16529 LIVKEWNSV True PC9_epitope_Rep1 1086.60734536118 1086.6062499358602 68.402 2 0.09617021136148576 0.0022385771235817233 0.010333926164713998 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 6071 7304 APLLQPRAA True PC9_epitope_Rep6 935.5552502186699 935.55414993586 37.247 2 0.09616792060802493 0.0022385771235817233 0.01033445676281964 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 58170 15018 LEKSFYQF True PC9_epitope_Rep6 1060.5229470308798 1060.52184993586 69.793 2 0.09616509246020695 0.0022385771235817233 0.010335111871238709 ['ENSG00000039123|ENST00000230640|MTREX'] 58754 7655 LESELIKSA True H1975_Epitope_Rep2 988.5440763982799 988.54296993586 34.399 2 0.09616112169235264 0.0022385771235817233 0.01033603172141111 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 99749 19224 SIIGRLLEV True PC9_epitope_Rep6 998.6124307416198 998.61132993586 86.597 2 0.09613975979443652 0.0022385771235817233 0.010340981660778372 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 105280 18697 SRLPETLPSL True PC9_epitope_Rep1 1111.6237237013102 1111.62262993586 76.709 2 0.09613399628870793 0.0022385771235817233 0.01034231755638446 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 72126 19884 [Acetylation]-M[Oxidation]FLVNSFLK True H1975_Epitope_Rep3 1155.5998181493298 1155.59872993586 83.241 2 0.09612931849343734 0.0022385771235817233 0.010343401921173091 ['ENSG00000126247|ENST00000246533|CAPNS1'] 33164 8413 GIVEFSGK True PC9_epitope_Rep6 835.44396843419 835.44286993586 42.044 2 0.09612375269018698 0.0022385771235817233 0.010344692277137408 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 96853 6350 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42828993586 29.401 2 0.09612361185419735 0.0022385771235817233 0.010344724930039606 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 58069 8923 LEIPPPKPP True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 39.227 2 0.09611778702332648 0.0022385771235817233 0.010346075506303716 ['ENSG00000143614|ENST00000368655|GATAD2B', 'GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 129179 19529 VQSGLRILL True PC9_epitope_Rep5 997.6284151589299 997.62730993586 80.17 2 0.0961154925879228 0.0022385771235817233 0.010346607552406701 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 8729 21876 AVATDFFTV True PC9_epitope_Rep5 969.48074786573 969.47964993586 89.183 2 0.09610333855851746 0.0022385771235817233 0.010349426329234019 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 6801 10271 AQEPGNYEV True PC9_epitope_Rep2 1005.4403396057298 1005.43924993586 44.84 2 0.0960974060943029 0.0022385771235817233 0.01035080245896177 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 27886 20282 FQDQQILTL True PC9_epitope_Rep4 1104.58152453616 1104.58097496793 86.158 1 0.0960903622335301 0.0022385771235817233 0.01035243662117516 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 104358 16181 SQISDTSVVL True PC9_epitope_Rep6 1047.5448046742702 1047.54427496793 74.595 1 0.09606243885122437 0.0022385771235817233 0.01035891721068635 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 1903 5536 AEIGEHVAP True H1975_Epitope_Rep3 921.45559574705 921.45448993586 26.342 2 0.09605831495267309 0.0022385771235817233 0.010359874631805155 ['ENSG00000084774|ENST00000264705|CAD'] 141630 15102 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.4906099358602 63.243 2 0.09605677874051975 0.0022385771235817233 0.010360231306633891 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 85217 12824 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 54.436 2 0.09604817966850637 0.0022385771235817233 0.010362228038866316 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 34859 23109 GQLDFSEFL True PC9_epitope_Rep2 1054.49712620586 1054.49657496793 94.379 1 0.09604494463676636 0.0022385771235817233 0.010362979318540052 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 121050 14418 VEQPTPFLP True H1975_Epitope_Rep2 1026.5385970950197 1026.53750993586 60.61 2 0.09603793229349487 0.0022385771235817233 0.01036460799101459 ['ENSG00000106397|ENST00000223127|PLOD3'] 15878 8122 EDIFYTSK True H1975_Epitope_Rep3 1001.47057710485 1001.46948993586 36.218 2 0.09603273547317748 0.0022385771235817233 0.010365815151129148 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3', 'ENST00000480697.6_1_10:5136636-5139787:+|nuORF', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 32844 14522 GHNGWVTQI True PC9_epitope_Rep5 1010.4933782380999 1010.49228993586 60.857 2 0.09603125728110627 0.0022385771235817233 0.010366158542187405 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF', 'ENST00000503170.1_1_5:180669321-180670896:-|nuORF', 'ENST00000514318.1_1_5:180670199-180670896:-|nuORF'] 1414 8266 AEEFKVPAA True H1975_Epitope_Rep1 960.4916469025998 960.49054993586 36.734 2 0.0960310585427098 0.0022385771235817233 0.010366204710889669 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 48688 7782 KAWSVARL True NCI_RA007_Epitope_Rep4 929.5446855349699 929.54358993586 36.614 2 0.09602616017162809 0.0022385771235817233 0.010367342708087078 ['CON__P02769'] 87363 20700 QPSSLLPLA True PC9_epitope_Rep1 924.5280324113199 924.52748496793 84.449 1 0.09601511014122756 0.0022385771235817233 0.010369910305325393 ['ENSG00000117984|ENST00000236671|CTSD'] 58621 6234 LEQVRSLSA True H1975_Epitope_Rep2 1001.55055876105 1001.54946993586 28.938 2 0.09600696607277998 0.0022385771235817233 0.010371803057697773 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 90858 9148 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 40.139 2 0.0960019410821317 0.0022385771235817233 0.010372971073381207 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 139325 21524 YLLDLHSYL True PC9_epitope_Rep2 1135.59136094387 1135.59026993586 88.26 2 0.0959936434328917 0.0022385771235817233 0.010374900064519394 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 9249 18378 AVPEIMDRI True PC9_epitope_Rep5 1042.5481162329 1042.5470099358602 75.709 2 0.09599147613834427 0.0022385771235817233 0.010375403961315486 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 141293 6318 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep2 1167.39140075807 1167.39087496793 29.238 1 0.09599146852954271 0.0022385771235817233 0.010375405730405768 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 45615 9534 IRAPSGTSL True PC9_epitope_Rep3 900.50288029264 900.50178993586 41.619 2 0.09597613390780081 0.0022385771235817233 0.010378971702239396 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 140562 17563 YRPPEVIL True PC9_epitope_Rep3 985.5596668927699 985.55856993586 72.743 2 0.09596644433095466 0.0022385771235817233 0.010381225555405028 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 132503 15327 VVDLPEENRE True H1975_Epitope_Rep2 1198.5829810881398 1198.58188993586 64.114 2 0.0959577889802119 0.002266809618624598 0.010383239235568524 ['ENSG00000164754|ENST00000297338|RAD21'] 40720 5884 HRTDSEIAL True PC9_epitope_Rep4 1040.5250722892 1040.5239699358601 29.53 2 0.09595086447612086 0.002266809618624598 0.010384850499531705 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 127665 10218 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 44.184 2 0.09594972913259997 0.002266809618624598 0.010385114705517388 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 42984 7300 IESRTLAIA True NCI_RA007_Epitope_Rep5 972.5603951687599 972.55928993586 34.757 2 0.09594595363813642 0.002266809618624598 0.010385993347521098 ['ENSG00000147872|ENST00000276914|PLIN2'] 59345 21561 LFKNDPLFF True PC9_epitope_Rep1 1139.6015317047497 1139.6004299358601 87.755 2 0.0959456128330822 0.002266809618624598 0.010386072663963164 ['ENSG00000103642|ENST00000261893|LACTB', 'nc|ENSG00000103642|P83111-2|LACTB'] 97478 7828 SEEGNTMVP True H1975_Epitope_Rep3 962.40151156886 962.40040993586 35.089 2 0.09593767346517716 0.002266809618624598 0.010387920576853534 ['ENSG00000135587|ENST00000258052|SMPD2'] 17509 12790 EHFPQAYSV True PC9_epitope_Rep2 1076.49270953176 1076.4916099358602 54.499 2 0.09592956193474222 0.002266809618624598 0.01038980888447832 ['ENSG00000076201|ENST00000265562|PTPN23'] 139414 21968 YLPEELAAL True PC9_epitope_Rep1 1017.5382627418498 1017.53716993586 89.319 2 0.09592172831657729 0.002266809618624598 0.010391632806342081 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000582626.1_1_17:18160183-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 97970 7035 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 31.984 1 0.09591399284177878 0.002266809618624598 0.010393434176434603 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 95378 3609 RVYGGLTTK True NCI_RA007_Epitope_Rep5 993.5607295219299 993.55962993586 19.839 2 0.09590198374899883 0.002266809618624598 0.010396231338702011 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 87710 10418 QRAHQILVL True PC9_epitope_Rep2 1076.6454622054 1076.6443699358601 45.394 2 0.09589078604429212 0.002266809618624598 0.01039884015800607 ['ENSG00000204267|ENST00000374897|TAP2'] 79268 8003 PAPPPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 38.233 2 0.09588771522213384 0.002266809618624598 0.010399555701051454 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 49261 8296 KEQIDIYEA True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 36.861 2 0.09587880506032442 0.002266809618624598 0.010401632154514718 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 2262 7754 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.43850993586 34.785 2 0.09587144489445629 0.002266809618624598 0.010403347689570675 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 44361 7794 ILEGELER True NCI_RA007_Epitope_Rep2 957.5131106231698 957.51200993586 34.945 2 0.09587080039276519 0.002266809618624598 0.010403497925270086 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 95832 5024 RYIRDAHTF True NCI_RA007_Epitope_Rep4 1177.59924028897 1177.5976049037902 25.813 3 0.0958607435185409 0.002266809618624598 0.01040584248705603 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 77739 5745 NTNPNFVR True PC9_epitope_Rep5 960.4777281739599 960.47662993586 27.091 2 0.09585229218306233 0.002266809618624598 0.010407813138219807 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 74152 8914 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.5032299358602 39.25 2 0.09584832528161186 0.002266809618624598 0.01040873824818029 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 130962 8919 VTDLAGNEY True H1975_Epitope_Rep3 980.4450906330001 980.44454496793 39.307 1 0.09582928270878288 0.002266809618624598 0.010413180203372731 ['ENSG00000197081|ENST00000356956|IGF2R'] 62741 16440 LLLPGELAK True PC9_epitope_Rep2 952.5957180483199 952.59462993586 68.478 2 0.09582314831822301 0.002266809618624598 0.010414611522935956 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 14091 7670 DRTGTGTLSV True PC9_epitope_Rep6 1005.50908787189 1005.50798993586 38.826 2 0.09581551497078773 0.002266809618624598 0.010416392851350898 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 104187 21019 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49562993586 85.908 2 0.09581389884567372 0.002266809618624598 0.01041677002973313 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 3266 6271 AGFAGDDAPR True PC9_epitope_Rep1 975.4410083120698 975.43990993586 28.935 2 0.0958053991838055 0.002266809618624598 0.010418753932237863 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 31289 20635 GDIEQFLITG True PC9_epitope_Rep5 1091.54989005471 1091.54937496793 84.425 1 0.09580146924285325 0.002266809618624598 0.0104196713397275 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 2225 11717 AEMSTPLSV True H1975_Epitope_Rep2 933.44773348529 933.44662993586 50.144 2 0.09579883747729809 0.002266809618624598 0.01042028574346858 ['ENSG00000137275|ENST00000259808|RIPK1'] 69540 22487 LVDDNYFYL True PC9_epitope_Rep3 1160.5389910178399 1160.5378899358602 91.771 2 0.09578950198017407 0.002266809618624598 0.010422465457601086 ['ENSG00000174231|ENST00000304992|PRPF8'] 31571 10215 GEELAGAIAA True H1975_Epitope_Rep1 900.4552613938798 900.45471496793 44.233 1 0.09578293422753772 0.002266809618624598 0.010423999200434944 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 104963 15976 SRDGMNIVL True PC9_epitope_Rep5 1003.5120650773499 1003.51096993586 66.443 2 0.09578048547546272 0.002266809618624598 0.010424571103392729 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 91369 17621 RHDDYLVML True PC9_epitope_Rep2 1160.5648289262 1160.56372993586 73.058 2 0.0957735943260436 0.002266809618624598 0.010426180682985045 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 77659 6189 NTIDPSHPM True NCI_RA007_Epitope_Rep3 1010.4491304676201 1010.44802993586 31.353 2 0.09577309763299863 0.002266809618624598 0.010426296705717807 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 27888 21192 FQDQQILTL True PC9_epitope_Rep5 1104.58152453616 1104.58097496793 86.563 1 0.09576501597186506 0.002266809618624598 0.010428184677002565 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 102898 13512 SPAPPLLHV True PC9_epitope_Rep6 929.53345214493 929.53234993586 63.695 2 0.09576383238979583 0.002266809618624598 0.010428461203047574 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 63911 4917 LNQIDSVK True NCI_RA007_Epitope_Rep1 915.50254593947 915.50144993586 23.207 2 0.09576092405251774 0.002266809618624598 0.010429140721710419 ['CON__P12763'] 86070 19248 QHSIPVFIF True PC9_epitope_Rep6 1086.58621599378 1086.5851099358601 86.688 2 0.0957545584460785 0.002266809618624598 0.010430628161383031 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 137469 7494 YEEAVKTLP True H1975_Epitope_Rep1 1048.54407639828 1048.5429699358601 33.822 2 0.0957493021556933 0.002266809618624598 0.010431856541443801 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 107097 9612 SVHKGFAFV True PC9_epitope_Rep4 990.5287011176598 990.52760993586 44.598 2 0.09574805337335093 0.0022927366104181952 0.010432148398560919 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 121979 9784 VFTSRSAAF True PC9_epitope_Rep4 984.5028802926398 984.50178993586 45.276 2 0.09574347341631119 0.0022927366104181952 0.010433218862253167 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 26884 16748 FLDGNELTL True NCI_RA007_Epitope_Rep1 1020.51277627 1020.51227496793 69.27 1 0.09572923374455386 0.0022927366104181952 0.010436547738774263 ['ENSG00000213719|ENST00000375784|CLIC1'] 75235 14691 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.48937496793 61.881 1 0.09572216059202555 0.0022927366104181952 0.01043820163952736 ['ENSG00000116285|ENST00000377482|ERRFI1'] 132536 12059 VVDPNQVNV True PC9_epitope_Rep2 982.5083595959001 982.50726993586 51.699 2 0.09569443848201076 0.0022927366104181952 0.010444686249594074 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 112390 22100 TLATDILM[Oxidation]GV True PC9_epitope_Rep2 1048.547447907 1048.54634993586 90.479 2 0.09569221267706535 0.0022927366104181952 0.010445207064471638 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 35159 16566 GQWVGTVLL True NCI_RA007_Epitope_Rep3 971.5440168286299 971.54346496793 72.953 1 0.09569195471184387 0.0022927366104181952 0.010445267427211037 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF'] 2716 7318 AETAAVTVAA True H1975_Epitope_Rep3 902.4709114580199 902.4703649679301 33.122 1 0.0956863597365188 0.0022927366104181952 0.010446576708810435 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 7091 10756 AQSKGIYYV True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 46.365 2 0.09568498368238945 0.0022927366104181952 0.010446898743525822 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 99844 20326 SILGKFAVV True PC9_epitope_Rep1 932.5695033004798 932.56840993586 83.014 2 0.09567829327383083 0.0022927366104181952 0.010448464618814836 ['ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 37971 13553 HAGVISVL True PC9_epitope_Rep2 794.46503823194 794.46448496793 57.424 1 0.0956680750154895 0.0022927366104181952 0.010450856610782612 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 76530 23612 NQIPGLIWI True PC9_epitope_Rep1 1052.60186605792 1052.6007699358602 95.614 2 0.09566757824599996 0.0022927366104181952 0.010450972912833884 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 43820 18504 IHSEPLGVVL True PC9_epitope_Rep1 1062.60734536118 1062.6062499358602 75.966 2 0.09566590922859078 0.0022927366104181952 0.010451363666765731 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 28491 16029 FSDVMEDLY True H1975_Epitope_Rep3 1117.4637774722498 1117.46327496793 67.113 1 0.09566153375598077 0.0022927366104181952 0.01045238812781744 ['ENSG00000167325|ENST00000300738|RRM1'] 95614 10964 RYAEAVQLL True NCI_RA007_Epitope_Rep5 1061.58694426977 1061.58584993586 48.809 2 0.09566038187829945 0.0022927366104181952 0.010452657841167244 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 72026 8177 METDPQTISA True H1975_Epitope_Rep3 1091.48049016555 1091.47997496793 36.432 1 0.09565914853488228 0.0022927366104181952 0.010452946637148509 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 70937 11230 LYGKIAEAF True NCI_RA007_Epitope_Rep4 1010.5436824754598 1010.54258993586 50.086 2 0.09565894157392375 0.0022927366104181952 0.010452995099247743 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 97380 11844 SEDPTVPLP True H1975_Epitope_Rep1 953.4705771048499 953.47002496793 50.555 1 0.09565063431949541 0.0022927366104181952 0.010454940507424687 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 95357 13724 RVVDLLNQA True PC9_epitope_Rep4 1026.5821932425 1026.58108993586 60.681 2 0.0956503338860076 0.0022927366104181952 0.010455010869951277 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 142890 19965 YYTSVTPVL True PC9_epitope_Rep2 1041.5382627418498 1041.53767496793 82.195 1 0.09564960149876438 0.0022927366104181952 0.010455182399379617 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 96891 13804 SATQVYTIL True H1975_Epitope_Rep3 994.53351171458 994.53240993586 58.402 2 0.09564819406206067 0.0022927366104181952 0.01045551203690934 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000481241.1_1_3:180491477-180491675:-|nuORF'] 2105 6514 AELGLTRAA True H1975_Epitope_Rep3 900.5028802926399 900.50178993586 30.026 2 0.09563183821169 0.0022927366104181952 0.010459343486957701 ['ENSG00000148331|ENST00000277458|ASB6', 'ASB6|p.Q233Rfs*2|1|0.18|ENSG00000148331|chr9:129638359-129638359|G/-|frameshift_variant', 'nc|ENSG00000148331|Q9NWX5-2|ASB6'] 10014 18217 AYQSIQNYL True PC9_epitope_Rep6 1098.53457434374 1098.53346993586 82.715 2 0.09561961495246782 0.0022927366104181952 0.010462207726934668 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 25661 8237 FEQEMATAA True NCI_RA007_Epitope_Rep1 996.4222470134398 996.4216949679301 36.039 1 0.09560912939853601 0.0022927366104181952 0.010464665370591876 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 21406 17424 ERINNINIL True PC9_epitope_Rep1 1097.61930702721 1097.61820993586 71.817 2 0.09560590619204336 0.0022927366104181952 0.01046542094830912 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF', 'DDX10|p.V195L|1|0.23|ENSG00000178105|chr11:108678360-108678360|G/T|missense_variant'] 37976 12866 HAGVISVL True PC9_epitope_Rep4 794.46503823194 794.46394993586 57.362 2 0.09559425298591626 0.0022927366104181952 0.01046815310325891 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 85716 14603 QHADPPVQIL True PC9_epitope_Rep5 1116.5927579262 1116.5916699358602 61.172 2 0.09559280520062416 0.0022927366104181952 0.010468492591486713 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 120405 11249 VEEMGVPVAA True H1975_Epitope_Rep2 1000.4899326504398 1000.4893749679301 48.313 1 0.09558979989015083 0.0022927366104181952 0.010469197334084393 ['ENSG00000249115|ENST00000203166|HAUS5', 'ENST00000585968.5_1_19:36103696-36110661:+|nuORF', 'ENST00000588570.5_1_19:36103696-36104695:+|nuORF', 'ENST00000428854.5_1_19:36103723-36104803:+|nuORF', 'nc|ENSG00000249115|O94927-2|HAUS5'] 89195 6111 QVSPEAGVQKV True PC9_epitope_Rep6 1140.6138872935999 1140.61278993586 31.912 2 0.09557991015738068 0.0022927366104181952 0.01047151678637038 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 8620 7651 ATYYGAFIKK True NCI_RA007_Epitope_Rep5 1160.6229954253197 1160.6213549037902 36.133 3 0.09556975455054438 0.0022927366104181952 0.010473899103531796 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'MAP4K4|p.N123Tfs*16|1|0.22|ENSG00000071054|chr2:101825376-101825376|G/-|frameshift_variant', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'TNIK|p.P670Qfs*14|1|0.22|ENSG00000154310|chr3:171125916-171125916|G/-|frameshift_variant', 'TNIK|p.K413Gfs*15|1|0.19|ENSG00000154310|chr3:171140499-171140500|CG/-|frameshift_variant', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 114806 16757 TQLGPPYHIL True PC9_epitope_Rep6 1137.61824439805 1137.6171499358602 76.948 2 0.09556511191293682 0.0022927366104181952 0.010474988352110286 ['ENSG00000119616|ENST00000341162|FCF1'] 115461 8721 TRMSTVSEL True PC9_epitope_Rep4 1022.5066453437399 1022.5055499358599 41.044 2 0.09556399691622017 0.0022927366104181952 0.010475249967003138 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 75039 13046 NHSGAVVLL True PC9_epitope_Rep5 908.50796567308 908.50686993586 55.186 2 0.09555416876764546 0.0022927366104181952 0.01047755624287537 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'ITGA6|p.G477Efs*22|1|0.1|ENSG00000091409|chr2:172476437-172476437|G/-|frameshift_variant', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 109147 15946 TAMDVVYAL True NCI_RA007_Epitope_Rep4 981.4841189940099 981.48357496793 69.207 1 0.09555143060754132 0.0022927366104181952 0.010478198866313623 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 99127 13113 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 55.714 2 0.09554717663217023 0.0022927366104181952 0.010479197313430416 ['ENSG00000132646|ENST00000379143|PCNA'] 35769 15467 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.5172549679301 64.314 1 0.09553758954581384 0.0022927366104181952 0.010481447822761537 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 47742 10843 IYEALELR True NCI_RA007_Epitope_Rep1 1005.5494961318899 1005.54838993586 46.171 2 0.09553436785481176 0.0022927366104181952 0.010482204198106578 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 1507 13276 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52317496793 56.167 1 0.09553142096133235 0.0022927366104181952 0.010482896103118698 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 38874 3750 HHEAGVTAL True PC9_epitope_Rep4 933.4668291370899 933.4657299358599 20.567 2 0.09552285494619693 0.0022927366104181952 0.010484907575982236 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 84862 5426 QEAPPPPPP True H1975_Epitope_Rep1 928.4654321547598 928.46432993586 25.928 2 0.09551985775037905 0.0022927366104181952 0.010485611464679329 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 84258 22821 PYNDYFEYF True PC9_epitope_Rep5 1256.50260550912 1256.50207496793 92.775 1 0.09551570014571009 0.0022927366104181952 0.01048658794880804 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 2521 8626 AEQPSELVSA True H1975_Epitope_Rep1 1029.4978544818498 1029.49727496793 38.107 1 0.09550903649582626 0.0022927366104181952 0.010488153200801905 ['ENSG00000183155|ENST00000367262|RABIF'] 114493 19488 TPYNYPVPV True PC9_epitope_Rep5 1048.5229470308798 1048.5223749679299 80.015 1 0.09549838954012044 0.0022927366104181952 0.010490654569333076 ['ENSG00000170906|ENST00000485876|NDUFA3'] 115010 18444 TRALMVVSL True PC9_epitope_Rep2 988.5739370579199 988.57282993586 76.277 2 0.09549156955851297 0.0022927366104181952 0.010492257136713853 ['nc|ENSG00000181885|O95471-2|CLDN7', 'ENSG00000181885|ENST00000360325|CLDN7'] 114583 15104 TQDGNIYQL True PC9_epitope_Rep6 1050.4981888350198 1050.49767496793 70.156 1 0.0954892534039863 0.0022927366104181952 0.010492801442460984 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 106148 13104 STDLQDYTYY True H1975_Epitope_Rep2 1267.52446315251 1267.52387496793 55.53 1 0.09548074620910371 0.0022927366104181952 0.010494800898571717 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 85064 9638 QEISHLIEP True NCI_RA007_Epitope_Rep4 1064.55022440788 1064.54912993586 43.925 2 0.09547925235914141 0.0022927366104181952 0.010495152037331444 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 27124 20328 FLIQHLPLV True PC9_epitope_Rep4 1078.65390163078 1078.6528099358602 86.334 2 0.0954756311529155 0.0022927366104181952 0.010496003270871699 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 35113 8228 GQVTEAVKV True PC9_epitope_Rep3 929.5181960036099 929.51708993586 36.628 2 0.09547206997439801 0.0022927366104181952 0.010496840457845212 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 115822 8688 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 38.38 1 0.09547107939043024 0.0022927366104181952 0.010497073342612443 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 98922 16848 SHADVVNLL True PC9_epitope_Rep5 966.51344497634 966.51234993586 69.815 2 0.09546407739396974 0.0022927366104181952 0.010498719641457566 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 45399 10376 IQESNFDRV True PC9_epitope_Rep1 1106.5356369729 1106.53452993586 44.796 2 0.09545988619766087 0.0022927366104181952 0.010499705186784765 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 40306 17479 HQPTTWVSF True PC9_epitope_Rep2 1101.52434401321 1101.5232499358601 72.487 2 0.09545084219578642 0.0022927366104181952 0.010501832152599566 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 74561 18106 NFTNVAATF True PC9_epitope_Rep6 983.4712458111899 983.47014993586 82.28 2 0.09544884853906976 0.0022927366104181952 0.010502301075387379 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 103689 5686 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 27.258 2 0.09544326902926907 0.0022927366104181952 0.010503613523245027 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 77942 20168 NVLDHFSEL True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 82.831 2 0.09543502012919237 0.0022927366104181952 0.010505554168102936 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 40799 9149 HRYGDSEFTV True PC9_epitope_Rep4 1209.54145062933 1209.5398049037901 42.783 3 0.09543423552551981 0.0022927366104181952 0.010505738772556101 ['ENSG00000169813|ENST00000682386|HNRNPF'] 104502 20576 SQMPTVIYV True PC9_epitope_Rep2 1036.5263181591597 1036.5252299358601 84.577 2 0.09543303773736081 0.0022927366104181952 0.010506020598537483 ['ENSG00000121931|ENST00000369763|LRIF1'] 8968 17637 AVGGLGSIIRV True PC9_epitope_Rep6 1040.6342288153598 1040.63312993586 80.48 2 0.09542870891662192 0.0022927366104181952 0.010507039181002209 ['ENSG00000136950|ENST00000353214|ARPC5L'] 106080 3707 STASELSPK True NCI_RA007_Epitope_Rep4 918.46582607758 918.46472993586 20.384 2 0.09542625776060201 0.0022927366104181952 0.010507615985889798 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 142817 14382 YYSPHGHILVL True PC9_epitope_Rep4 1297.68190728377 1297.68025490379 63.229 3 0.09542561642012244 0.0022927366104181952 0.01050776691080565 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 111299 13332 THMPSVVGV True PC9_epitope_Rep1 925.4691376362099 925.46804993586 56.14 2 0.09542367871980936 0.0022927366104181952 0.010508222917099741 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 103965 19371 SQANRLFYL True PC9_epitope_Rep5 1110.5821932425 1110.58108993586 79.557 2 0.09541921453330955 0.0022927366104181952 0.01050927356256298 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 113768 18955 TMLGKFYHF True PC9_epitope_Rep5 1142.55828699378 1142.5566449037901 77.934 3 0.09540680537430918 0.0022927366104181952 0.01051219458107618 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 132237 17404 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 71.944 2 0.09540655594591259 0.0022927366104181952 0.010512253302482002 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 43250 16729 IFNPVSKNF True PC9_epitope_Rep3 1064.5654805492002 1064.5643899358602 69.487 2 0.09540599439645078 0.0022927366104181952 0.010512385505788795 ['ENST00000589391.5_1_2:179401165-179403504:+|nuORF', 'ENST00000415561.1_1_2:179402212-179403504:+|nuORF', 'ENST00000588244.5_1_2:179402120-179403504:+|nuORF', 'ENST00000419746.5_1_2:179402219-179403504:+|nuORF', 'ENST00000589434.5_1_2:179388144-179403504:+|nuORF'] 7224 11165 ARDDTHYLL True PC9_epitope_Rep3 1102.54072235334 1102.5396299358601 47.946 2 0.09540502618313472 0.0022927366104181952 0.01051261345202975 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 140572 10680 YRQKQVVIL True PC9_epitope_Rep1 1145.6920780446499 1145.69044490379 45.971 3 0.09539556160823019 0.0023207524123610604 0.010514841942514657 ['ENSG00000143179|ENST00000367879|UCK2'] 91006 9725 RFEEKHAYF True PC9_epitope_Rep3 1225.5880068989297 1225.58635490379 42.359 3 0.0953909324740994 0.0023207524123610604 0.010515932063415884 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 54479 11870 KYGRIVEVL True PC9_epitope_Rep4 1075.6389798426299 1075.6378899358601 53.433 2 0.09538908791658426 0.0023207524123610604 0.010516366470666574 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'RBMXL1|p.S293Ifs*57|1|0.11|ENSG00000213516|chr1:88982940-88982949|AGTGGAGCAC/-|frameshift_variant', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'RBMX|p.P96Rfs*41|1|0.14|ENSG00000147274|chrX:136878016-136878016|G/-|frameshift_variant', 'nc|ENSG00000147274|P38159-3|RBMX'] 106020 11887 SSVVTVPSSNF True NCI_RA007_Epitope_Rep4 1122.55570371114 1122.55460993586 52.72 2 0.09538657570503072 0.0023207524123610604 0.010516958142965611 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211893|P01859|IGHG2'] 37860 20415 GYNVKFDMF True PC9_epitope_Rep3 1119.5059170677498 1119.50480993586 83.78 2 0.0953818648615009 0.0023207524123610604 0.010518067719179337 ['ENST00000589115.5_1_19:1105440-1106426:+|nuORF', 'ENST00000588919.5_1_19:1105440-1106636:+|nuORF', 'nc|ENSG00000167468|P36969-2|GPX4', 'ENSG00000167468|ENST00000354171|GPX4'] 43845 13261 IHSPVVNEL True PC9_epitope_Rep5 1006.54474510462 1006.54364993586 56.019 2 0.09537920209963847 0.0023207524123610604 0.010518694946422479 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 45246 18955 IPTPIVGV True PC9_epitope_Rep4 794.49019035062 794.48908993586 80.998 2 0.09537464185501794 0.0023207524123610604 0.010519769218170431 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant'] 115111 7242 TRDETNYGI True PC9_epitope_Rep6 1067.4883524273098 1067.48724993586 36.98 2 0.0953699630907238 0.0023207524123610604 0.010520871518509962 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 118427 12777 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47054993586 60.64 2 0.0953635656269809 0.0023207524123610604 0.01052237891628351 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 133913 19284 VYIHGGGWAL True PC9_epitope_Rep1 1071.5501648382299 1071.5490699358602 78.978 2 0.09535989264241429 0.0023207524123610604 0.010523244453499078 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1'] 35061 8348 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42828993586 39.568 2 0.09535412179394342 0.0023207524123610604 0.010524604488294344 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 114009 6354 TPAPSAPAA True PC9_epitope_Rep5 781.39701824177 781.39646496793 29.416 1 0.09535290248340546 0.0023207524123610604 0.010524891868615521 ['ENSG00000130706|ENST00000253003|ADRM1'] 111026 13061 THDEAINVL True PC9_epitope_Rep1 1010.5032742154599 1010.50216993586 55.107 2 0.09535156408635274 0.0023207524123610604 0.010525207325134801 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 74841 13925 NHFMDNTTL True PC9_epitope_Rep3 1091.47059418819 1091.46948993586 58.642 2 0.0953372250162178 0.0023207524123610604 0.010528587569359288 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 12061 15641 DHTAPLLL True PC9_epitope_Rep6 878.48616759934 878.48506993586 72.368 2 0.09533612817075433 0.0023207524123610604 0.010528846178556867 ['ENSG00000188352|ENST00000338382|FOCAD'] 107401 19223 SVLNELPSA True PC9_epitope_Rep5 928.48656152216 928.48601496793 78.981 1 0.09533168622598295 0.0023207524123610604 0.010529893541755979 ['nc|ENSG00000167608|Q7Z404|TMC4', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 140556 18567 YRPPELLL True PC9_epitope_Rep4 999.5753169569099 999.57420993586 79.495 2 0.09533050451057283 0.0023207524123610604 0.010530172194342914 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 129219 6319 VQTEVNREL True PC9_epitope_Rep6 1086.56693710118 1086.5658499358601 32.853 2 0.0953282145907638 0.0023207524123610604 0.010530712185341072 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 31599 5815 GEEQPPQPP True H1975_Epitope_Rep2 977.4454249861699 977.44432993586 27.358 2 0.09531181274209971 0.0023207524123610604 0.010534580711584491 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 28163 9409 FRDQNPEQL True PC9_epitope_Rep1 1145.5465360097699 1145.54542993586 41.05 2 0.09530689869309417 0.0023207524123610604 0.010535739998325222 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 6641 19291 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 79.424 2 0.09529965933962727 0.0023207524123610604 0.010537448075176939 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 42647 3877 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 20.028 2 0.09529402071064835 0.0023207524123610604 0.010538778654393744 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 45696 16103 IRLENEIQTY True PC9_epitope_Rep3 1277.66156576201 1277.6604699358602 67.091 2 0.09528985876244976 0.0023207524123610604 0.010539760875444674 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 75691 15990 NLIGKIENV True PC9_epitope_Rep2 998.5760452328999 998.57494993586 66.758 2 0.09528455088539893 0.0023207524123610604 0.0105410136624544 ['ENSG00000129295|ENST00000620350|DNAAF11', 'nc|ENSG00000129295|Q86X45-2|DNAAF11', 'ENST00000520446.5_1_8:133637625-133687739:-|nuORF'] 97846 11852 SELPGAFEA True NCI_RA007_Epitope_Rep4 919.4287122928699 919.42816496793 52.569 1 0.09527985083990478 0.0023207524123610604 0.010542123104850188 ['ENSG00000126247|ENST00000246533|CAPNS1'] 30150 19673 FYPPHPDYTW True PC9_epitope_Rep3 1321.5767735088898 1321.57566993586 80.906 2 0.09526933735854722 0.0023207524123610604 0.01054460520694753 ['ENSG00000130309|ENST00000252599|COLGALT1'] 72213 15032 MHAGSLLL True PC9_epitope_Rep2 840.45275929608 840.45166993586 63.077 2 0.09526539788854624 0.0023207524123610604 0.010545535410010064 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'RANBP2|p.L369Kfs*5|1|0.07|ENSG00000153201|chr2:108748957-108748958|TT/-|frameshift_variant', 'RGPD4|p.V610Ffs*5|1|0.07|ENSG00000196862|chr2:107860831-107860831|G/-|frameshift_variant', 'RGPD4|p.M814Ifs*6|1|0.37|ENSG00000196862|chr2:107863005-107863005|G/-|frameshift_variant', 'RGPD3|p.H839Ifs*29|1|0.29|ENSG00000153165|chr2:106429736-106429736|G/-|frameshift_variant', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 137405 5117 YEAPGVREA True H1975_Epitope_Rep2 990.4770594676198 990.47596993586 24.762 2 0.09526358752654923 0.0023207524123610604 0.010545962905951955 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 107819 18543 SVVAAVQGL True PC9_epitope_Rep5 842.48616759934 842.48506993586 76.349 2 0.0952624548569274 0.0023207524123610604 0.010546230381103666 ['ENSG00000110092|ENST00000227507|CCND1'] 104193 21057 SQFQQEFPSL True PC9_epitope_Rep1 1209.5666027480097 1209.56550993586 85.826 2 0.09525947376095109 0.0023207524123610604 0.010546934385194094 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 103940 17501 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51234993586 72.496 2 0.09525142357743399 0.0023207524123610604 0.010548835708829992 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 103856 6875 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 33.665 2 0.09525036666282184 0.0023207524123610604 0.010549085359252737 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 129040 19031 VQNDTLLQV True PC9_epitope_Rep3 1028.5502244078798 1028.54912993586 78.423 2 0.09524687130837221 0.0023207524123610604 0.010549911025799802 ['ENSG00000184897|ENST00000333762|H1-10'] 87895 7019 QRIDSDDAL True PC9_epitope_Rep4 1031.4883524273098 1031.48724993586 34.247 2 0.09524138529575976 0.0023207524123610604 0.010551207046159404 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 106848 6041 SVASPFTSK True NCI_RA007_Epitope_Rep3 922.4759968384601 922.47488993586 30.742 2 0.09523163189652699 0.0023207524123610604 0.010553511571744471 ['ENSG00000187527|ENST00000342358|ATP13A5', 'ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4'] 6169 8912 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 39.638 2 0.09522269768412235 0.0023207524123610604 0.010555622960810718 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 108753 19112 SYSHIMALI True PC9_epitope_Rep4 1033.52665251233 1033.52554993586 81.605 2 0.09521763436555737 0.0023454872216637727 0.01055681973443313 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 118403 14327 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47054993586 60.372 2 0.09521447805503853 0.0023454872216637727 0.010557565830082386 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 140094 19595 YQLPEILRT True PC9_epitope_Rep2 1131.6288090817498 1131.6277099358601 80.755 2 0.09521019558047575 0.0023454872216637727 0.010558578211098419 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 77787 19311 NTTDIFQTV True PC9_epitope_Rep4 1037.50293986229 1037.50184993586 82.387 2 0.09520549603926724 0.0023454872216637727 0.010559689293370514 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 60763 9296 LHSESSMSL True PC9_epitope_Rep5 989.44879611445 989.44768993586 40.707 2 0.09520525623603324 0.0023454872216637727 0.010559745991488512 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 113651 15107 TLVYHVVGV True PC9_epitope_Rep4 985.5596668927699 985.55856993586 66.038 2 0.09519593525984417 0.0023454872216637727 0.010561950030306945 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 72385 18971 MKFNPFVTSD True PC9_epitope_Rep2 1184.5535955361597 1184.5524899358602 78.338 2 0.09517881042845588 0.0023454872216637727 0.010566000510322207 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 118583 22035 TYQVLAVTF True PC9_epitope_Rep5 1040.5542471591598 1040.5531499358601 89.784 2 0.09517399676916787 0.0023454872216637727 0.010567139335414446 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 40537 14913 HRFLAEDAL True PC9_epitope_Rep1 1070.55089311422 1070.5497899358602 62.185 2 0.09516887863777816 0.0023454872216637727 0.010568350321231053 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 114669 14642 TQFAEKFQEV True PC9_epitope_Rep1 1225.59790287629 1225.5968099358602 61.143 2 0.09515458200245856 0.0023454872216637727 0.010571733705148832 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3'] 22647 7114 ETPALTINR True H1975_Epitope_Rep3 1013.55055876105 1013.54946993586 32.334 2 0.09515371220063447 0.0023454872216637727 0.010571939582187936 ['ENST00000419045.1_1_X:48635274-48635379:-|nuORF', 'ENSG00000167315|ENST00000285093|ACAA2'] 142333 11408 YYEEQHPEL True PC9_epitope_Rep3 1206.5193182024198 1206.51822993586 48.883 2 0.09514744182317485 0.0023454872216637727 0.010573423856990435 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 32876 10649 GHSGAVMEL True PC9_epitope_Rep5 899.4171020633501 899.41600993586 45.949 2 0.09514562769793423 0.0023454872216637727 0.010573853319535503 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40'] 34827 13930 GQIGMIQAL True NCI_RA007_Epitope_Rep3 929.5004377644899 929.49988496793 62.106 1 0.09514451184052836 0.0023454872216637727 0.010574117487580062 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A2|p.G861C|1|0.16|ENSG00000018625|chr1:160136587-160136587|G/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENSG00000132681|ENST00000368081|ATP1A4'] 107407 13467 SVLNLVIVK True NCI_RA007_Epitope_Rep4 983.6379172134699 983.63682993586 59.004 2 0.09514320379200226 0.0023454872216637727 0.010574427162939036 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 47448 17725 IVMQEVETV True PC9_epitope_Rep1 1046.53179746242 1046.5307099358602 72.977 2 0.09514095505060036 0.0023454872216637727 0.010574959563816889 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 93357 10363 RPYQPLPEA True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 44.743 2 0.09514071071630556 0.0023454872216637727 0.010575017412730644 ['ENSG00000165476|ENST00000373758|REEP3'] 9144 17447 AVLDDKLYVV True PC9_epitope_Rep6 1133.63322575585 1133.6321299358601 79.727 2 0.095126123781662 0.0023454872216637727 0.010578471580475406 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 33782 19416 GLLAVLRPL True PC9_epitope_Rep4 950.6276868829399 950.62658993586 82.795 2 0.09512293525861086 0.0023454872216637727 0.010579226761676922 ['ENSG00000168569|ENST00000307366|TMEM223'] 21762 13105 ERTSFNYAM True PC9_epitope_Rep5 1117.4862442523297 1117.4851499358601 55.413 2 0.09512101478255867 0.0023454872216637727 0.01057968163884438 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 104556 13791 SQPPVQVSV True PC9_epitope_Rep5 939.5025459394699 939.50144993586 58.068 2 0.09511906526595339 0.0023454872216637727 0.010580143413487989 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 99743 21050 SIIGRLLEV True PC9_epitope_Rep2 998.6124307416198 998.61132993586 86.423 2 0.09510824612428112 0.0023454872216637727 0.010582706451304444 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 2216 8557 AEMPADSGYPA True H1975_Epitope_Rep3 1107.45427541771 1107.4531699358602 37.903 2 0.09510774586920369 0.0023454872216637727 0.0105828249752414 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 5642 9995 APAAATVAV True PC9_epitope_Rep2 769.4334037504899 769.4328549679301 43.774 1 0.09509636506307617 0.0023454872216637727 0.010585521736775877 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 2000 10583 AEIQGVIDA True H1975_Epitope_Rep3 914.4709114580199 914.4703649679301 45.777 1 0.09509451589109165 0.0023454872216637727 0.010585959972742504 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 71216 20963 LYPEGLAQL True PC9_epitope_Rep3 1002.5385970950199 1002.53750993586 85.914 2 0.09509350463054556 0.0023454872216637727 0.010586199639062217 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 93061 8575 RPNDIM[Oxidation]AEV True PC9_epitope_Rep5 1059.50189469691 1059.5007899358602 37.925 2 0.09509339164087474 0.0023454872216637727 0.010586226417663358 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 35527 4541 GSSDVIIHR True NCI_RA007_Epitope_Rep2 982.5195929859399 982.51848993586 22.292 2 0.09509215273647105 0.0023454872216637727 0.010586520042773625 ['PHRF1|p.S867Pfs*46|1|0.14|ENSG00000070047|chr11:608054-608064|CAGCCCGAAGG/-|frameshift_variant', 'ENST00000532550.1_1_11:601671-606691:+|nuORF', 'nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 120435 3698 VEEPSRPSA True H1975_Epitope_Rep2 970.4719740871799 970.47086993586 19.204 2 0.095091777404729 0.0023454872216637727 0.01058660899936986 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 32504 5474 GGEIQPVSVK True NCI_RA007_Epitope_Rep5 1012.5553097883198 1012.55420993586 27.743 2 0.09509116062540711 0.0023454872216637727 0.010586755182499874 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000465573.1_1_2:198365552-198367980:+|nuORF'] 106112 12182 STDHIPILY True H1975_Epitope_Rep2 1057.54441075145 1057.5433099358602 51.942 2 0.09509105778149644 0.0023454872216637727 0.010586779557765795 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 106780 9184 SVADTVARV True PC9_epitope_Rep4 916.4977949121999 916.49668993586 42.92 2 0.09507856598953449 0.0023454872216637727 0.010589740662561995 ['ENSG00000145632|ENST00000274289|PLK2'] 28162 20067 FRDPLGYIA True PC9_epitope_Rep1 1050.5498304850598 1050.5487299358601 82.014 2 0.09507319100181356 0.0023454872216637727 0.010591015013808174 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'KDM5C|p.Y601Lfs*21|1|0.69|ENSG00000126012|chrX:53201918-53201919|-/A|frameshift_variant', 'KDM5C|p.T270Qfs*2|1|0.16|ENSG00000126012|chrX:53215951-53215951|G/-|frameshift_variant', 'KDM5C|p.E293Rfs*6|1|0.35|ENSG00000126012|chrX:53215881-53215881|C/-|frameshift_variant', 'KDM5C|p.E23K|1|0.3|ENSG00000126012|chrX:53224823-53224823|C/T|missense_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 73013 20076 MRASSFLIV True PC9_epitope_Rep1 1022.5582869937799 1022.55718993586 82.05 2 0.09505905421772619 0.0023454872216637727 0.010594367388412525 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 99327 14081 SHSPPLLQV True PC9_epitope_Rep5 976.53418042092 976.53308993586 59.177 2 0.09505126774953056 0.0023454872216637727 0.010596214290300929 ['ENSG00000165030|ENST00000297689|NFIL3'] 132233 16933 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 70.148 2 0.0950494215876465 0.0023454872216637727 0.01059665223335375 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 116784 12898 TVDSYVISY True H1975_Epitope_Rep3 1045.49679185269 1045.4956899358601 54.837 2 0.09504766948031014 0.0023454872216637727 0.010597067880890319 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 103834 6843 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 31.727 2 0.09503744954867299 0.0023454872216637727 0.010599492635889126 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 111233 9895 THITAQTAVL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 45.713 2 0.09503424220364673 0.0023454872216637727 0.010600253711231113 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 137292 13470 YDAGEVSFY True H1975_Epitope_Rep2 1049.43419159613 1049.4336749679298 56.946 1 0.09503419982235836 0.0023454872216637727 0.010600263768293733 ['ENSG00000204713|ENST00000377199|TRIM27'] 2524 8781 AEQPSELVSA True H1975_Epitope_Rep3 1029.4978544818498 1029.4967499358602 38.782 2 0.09503343219956874 0.0023454872216637727 0.01060044592644308 ['ENSG00000183155|ENST00000367262|RABIF'] 7541 13005 ASEDSVLLY True H1975_Epitope_Rep1 995.4811417885501 995.4805949679301 55.106 1 0.09502762749338722 0.0023454872216637727 0.010601823489168091 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 25659 7680 FEQEMATAA True H1975_Epitope_Rep3 996.4222470134398 996.4216949679301 34.524 1 0.09502446226869447 0.0023454872216637727 0.010602574726513025 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 95116 6888 RVEEAIHPV True PC9_epitope_Rep5 1048.56654317836 1048.5654499358602 31.464 2 0.09501673281424239 0.0023454872216637727 0.010604409455196681 ['ENST00000367590.8_1_1:180601192-180601402:+|nuORF'] 54750 16851 KYMPNVKVAVF True PC9_epitope_Rep5 1294.7107648838999 1294.7096699358601 69.826 2 0.095015025131063 0.0023454872216637727 0.010604814846055438 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 140555 19816 YRPPELLL True PC9_epitope_Rep3 999.5753169569099 999.57420993586 81.455 2 0.09500755157498625 0.0023454872216637727 0.010606589184276346 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 88367 20609 QSLAGGIIGV True PC9_epitope_Rep1 913.5232813840499 913.5227349679301 84.089 1 0.09499141754370849 0.0023454872216637727 0.010610420616774772 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 71274 22396 LYPSIIQEF True PC9_epitope_Rep3 1108.580461907 1108.57987496793 91.426 1 0.09498398791347458 0.0023454872216637727 0.010612185412523348 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 115342 14421 TRIGLINDM True PC9_epitope_Rep6 1031.54336520563 1031.54226993586 67.366 2 0.09497909391198381 0.0023454872216637727 0.010613348060750413 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 1962 8714 AEIPEEHIP True H1975_Epitope_Rep1 1033.50802524273 1033.5069299358602 38.446 2 0.0949745180762339 0.0023454872216637727 0.010614435233238878 ['ENSG00000198218|ENST00000395443|QRICH1'] 139251 11864 YLHSQVVSV True PC9_epitope_Rep5 1030.5447451046198 1030.54364993586 50.634 2 0.09497147173595744 0.0023454872216637727 0.010615159071749406 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 75821 22164 NLPDEEIFQQL True PC9_epitope_Rep2 1344.6561460284 1344.65504993586 90.741 2 0.09496178769074363 0.0023454872216637727 0.010617460402012141 ['ENSG00000169019|ENST00000381571|COMMD8'] 141183 18167 YSVEYLPKV True PC9_epitope_Rep5 1096.5804619069997 1096.57936993586 74.888 2 0.09495566051918955 0.0023454872216637727 0.01061891671690739 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 97705 11039 SEIDQVVPAA True H1975_Epitope_Rep2 1027.5185899264297 1027.51748993586 47.491 2 0.09494179919705283 0.0023454872216637727 0.010622211996999814 ['ENSG00000162607|ENST00000339950|USP1'] 14242 15311 DSLLQDGEF True H1975_Epitope_Rep1 1022.4556553166999 1022.45507496793 64.162 1 0.0949397311189233 0.0023454872216637727 0.010622703728776033 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 114030 4971 TPASPPRVSA True PC9_epitope_Rep4 981.52434401321 981.52324993586 25.727 2 0.09493967023790859 0.0023454872216637727 0.010622718204925491 ['ENST00000513117.1_1_5:6633573-6668378:+|nuORF'] 99051 16083 SHFVSDVVI True PC9_epitope_Rep2 1001.5181960036099 1001.51708993586 67.12 2 0.09493747792863635 0.0023454872216637727 0.010623239499751871 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 121706 18515 VFLENVIR True PC9_epitope_Rep3 988.5705659296399 988.56946993586 76.437 2 0.0949355441753957 0.0023454872216637727 0.010623699334436779 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 105954 4971 SSSPPILTK True NCI_RA007_Epitope_Rep3 928.52294703088 928.52184993586 26.549 2 0.09493446073559106 0.0023454872216637727 0.010623956978067148 ['ENSG00000083168|ENST00000265713|KAT6A'] 14397 10314 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.55018993586 44.62 2 0.09493379384917024 0.0023454872216637727 0.010624115567625735 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 27466 15409 FMDPASALY True H1975_Epitope_Rep1 1013.45281886573 1013.4522749679301 64.541 1 0.09493334406823184 0.0023454872216637727 0.010624222529480542 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 68905 7269 LTNQEPIA True H1975_Epitope_Rep2 884.4603467743199 884.4597949679301 32.896 1 0.09493107032433018 0.0023454872216637727 0.010624763261415553 ['ENST00000370382.7_2_1:92546128-92605069:+|nuORF', 'nc|ENSG00000189195|Q5XKL5-4|BTBD8', 'nc|ENSG00000189195|Q5XKL5|BTBD8'] 26213 15889 FHDMGGVQL True PC9_epitope_Rep1 1002.4593012284997 1002.4582099358599 65.927 2 0.0949271198877305 0.0023454872216637727 0.010625702799409331 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 55209 12781 LADAINTEF True NCI_RA007_Epitope_Rep4 992.48147614172 992.48036993586 56.225 2 0.09491848880052643 0.0023454872216637727 0.010627755818220183 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 34835 18974 GQISEVVVV True PC9_epitope_Rep1 928.5229470308799 928.52184993586 77.769 2 0.09491299105441643 0.0023454872216637727 0.010629063726923554 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 76057 12192 NM[Oxidation]DNMFESY True H1975_Epitope_Rep3 1165.40561135357 1165.40507496793 52.068 1 0.09491089631362591 0.0023454872216637727 0.010629562104098055 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 1413 8172 AEEFKVPAA True H1975_Epitope_Rep1 960.4916469025998 960.49054993586 36.374 2 0.09490852447266267 0.0023454872216637727 0.01063012643530958 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 1418 8434 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 37.392 2 0.09490791986413644 0.0023454872216637727 0.010630270294142955 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 89399 23324 QYAPLLAVF True PC9_epitope_Rep5 1020.5644179200399 1020.56332993586 94.696 2 0.09490211234915863 0.0023454872216637727 0.010631652212073139 ['ENSG00000136261|ENST00000258761|BZW2'] 75218 13929 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 58.726 2 0.09490142538998479 0.0023454872216637727 0.010631815687645818 ['ENSG00000116285|ENST00000377482|ERRFI1'] 87369 20624 QPSSLLPLA True PC9_epitope_Rep5 924.5280324113199 924.52748496793 84.381 1 0.09489844123567398 0.0023454872216637727 0.01063252585415861 ['ENSG00000117984|ENST00000236671|CTSD'] 4125 11360 AHSPLAAQL True PC9_epitope_Rep1 906.4923156089401 906.49120993586 48.577 2 0.09489543596810383 0.0023454872216637727 0.01063324109079036 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 66001 7476 LSEAKLDEY True H1975_Epitope_Rep1 1066.51825557326 1066.51714993586 33.755 2 0.09489511063630678 0.0023454872216637727 0.010633318520657678 ['ENSG00000089902|ENST00000262241|RCOR1'] 89037 19578 QVLEKFFET True PC9_epitope_Rep5 1139.5862755634298 1139.5851699358602 80.358 2 0.09489038312993424 0.0023454872216637727 0.010634443740772121 ['ENSG00000180182|ENST00000324817|MED14'] 134164 19088 VYLPLTSHI True PC9_epitope_Rep2 1041.58588164061 1041.58478993586 78.788 2 0.09488304308297385 0.0023454872216637727 0.010636191010669295 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 18136 13728 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59674993586 57.831 2 0.09487632268780011 0.0023454872216637727 0.010637791014315006 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 90800 6281 RESNNMVVP True NCI_RA007_Epitope_Rep4 1044.5022286696399 1044.50112993586 30.763 2 0.09487574150424616 0.0023454872216637727 0.01063792939428546 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 71496 17774 LYYDAIWHF True NCI_RA007_Epitope_Rep5 1226.5760452328998 1226.57494993586 75.154 2 0.09487005018590623 0.0023454872216637727 0.01063928458929707 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 132605 18674 VVFEIQGTTV True PC9_epitope_Rep6 1091.58627556343 1091.5851699358602 84.474 2 0.094869753787203 0.0023454872216637727 0.010639355171124276 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 21360 10846 ERFSTSQVL True PC9_epitope_Rep6 1065.54547338061 1065.54436993586 52.578 2 0.09486914953338298 0.0023454872216637727 0.01063949906428963 ['ENSG00000181481|ENST00000328381|RNF135'] 111096 11385 THDTFQNEL True PC9_epitope_Rep3 1103.48835242731 1103.48724993586 48.795 2 0.09486906991526986 0.0023454872216637727 0.01063951802417923 ['ENSG00000198642|ENST00000359039|KLHL9'] 134574 20654 VYSEVAAYEF True PC9_epitope_Rep5 1176.5339056373998 1176.5333749679298 84.498 1 0.09486625086511201 0.0023651414536523243 0.01064018936047388 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 73843 8882 NAMEDAQTL True NCI_RA007_Epitope_Rep4 991.42806066987 991.42696993586 40.991 2 0.0948599100415876 0.0023651414536523243 0.01064169952873028 ['nc|ENSG00000196975|P09525|ANXA4', 'ENSG00000196975|ENST00000394295|ANXA4'] 133949 21360 VYILC[Carbamidomethyl]YLSF True PC9_epitope_Rep5 1176.5889186951501 1176.58782993586 87.22 2 0.09485976686551936 0.0023651414536523243 0.010641733630748206 ['ENSG00000275591|ENST00000618742|XKR5'] 114477 22431 TPYGYFLISA True PC9_epitope_Rep5 1130.5648118428599 1130.56370993586 91.279 2 0.09483982387430942 0.0023651414536523243 0.01064648471579428 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 98172 10181 SESVPVIAA True H1975_Epitope_Rep2 871.46509780159 871.46454496793 44.163 1 0.09483050927703797 0.0023651414536523243 0.010648704454421594 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 6156 11367 APM[Oxidation]PPIIHA True PC9_epitope_Rep5 961.50552352537 961.50442993586 48.72 2 0.09482477587239312 0.0023651414536523243 0.01065007098675968 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 10091 17830 AYTPFHAVL True PC9_epitope_Rep2 1017.5283667644899 1017.52726993586 73.88 2 0.09482053969049252 0.0023651414536523243 0.01065108076964519 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 14089 8153 DRTGTGTLSV True PC9_epitope_Rep4 1005.50908787189 1005.50798993586 38.815 2 0.09481548211163227 0.0023651414536523243 0.01065228646900429 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 137447 6192 YEDIRVSRV True H1975_Epitope_Rep3 1135.59857158263 1135.59691490379 28.83 3 0.09480935465110589 0.0023651414536523243 0.010653747396263421 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 78332 18982 NYISGIQTI True PC9_epitope_Rep4 1007.52876068731 1007.52766993586 81.106 2 0.09480547407334129 0.0023651414536523243 0.010654672713651534 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 2122 7494 AELLSRTV True H1975_Epitope_Rep3 887.50763131991 887.50652993586 33.808 2 0.09479422280917657 0.0023651414536523243 0.010657355991224065 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589085.5_1_19:5787014-5789688:-|nuORF'] 97441 13179 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 55.789 1 0.09479119070992417 0.0023651414536523243 0.010658079216697883 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 119866 8215 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep1 964.4688036634799 964.46770993586 35.953 2 0.09478459958794044 0.0023651414536523243 0.010659651512056497 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 40403 6636 HQVPAVSSV True PC9_epitope_Rep2 922.4872302285 922.48612993586 30.935 2 0.09478223782087845 0.0023651414536523243 0.01066021495925886 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 139933 20944 YQAPDIDVQL True PC9_epitope_Rep1 1160.57135377528 1160.57077496793 85.382 1 0.0947815448601174 0.0023651414536523243 0.010660380284409979 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 28899 14706 FTDGDAALEF True H1975_Epitope_Rep3 1084.4713053808398 1084.4707749679299 61.939 1 0.09477091469478462 0.0023651414536523243 0.010662916713017084 ['ENSG00000173545|ENST00000308683|ZNF622'] 76919 17185 NRDPILVSL True PC9_epitope_Rep4 1025.58694426977 1025.58584993586 74.107 2 0.09476645935743551 0.0023651414536523243 0.010663979957023988 ['ENSG00000106789|ENST00000375077|CORO2A'] 106844 7192 SVASISLTK True NCI_RA007_Epitope_Rep4 904.52294703088 904.52239496793 34.289 1 0.09475430398484916 0.0023651414536523243 0.010666881288848252 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 120670 10236 VEINENLPA True H1975_Epitope_Rep3 997.5080252427299 997.50692993586 44.421 2 0.09474798013719724 0.0023651414536523243 0.010668391007201114 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 2136 6439 AELPASVHA True H1975_Epitope_Rep2 893.4606811274899 893.45958993586 29.687 2 0.09474754768346577 0.0023651414536523243 0.010668494256095831 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 89459 16201 QYESKVFYL True PC9_epitope_Rep6 1175.5862755634298 1175.5851699358602 74.671 2 0.09473951974820542 0.0023651414536523243 0.010670411108735133 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 93531 4981 RQLENGTTL True NCI_RA007_Epitope_Rep3 1030.5407223533398 1030.5396299358601 26.589 2 0.09473783491669907 0.0023651414536523243 0.010670813442268206 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-5|ESYT2', 'ENST00000435514.3_1_7:158526900-158536411:-|nuORF'] 4918 22249 ALFVRLLALA True PC9_epitope_Rep2 1085.6961007959299 1085.69500993586 91.058 2 0.09473304809589202 0.0023651414536523243 0.010671956601785899 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF', 'TGFBI|p.Y82Sfs*47|1|0.21|ENSG00000120708|chr5:136044069-136044069|A/-|frameshift_variant'] 32084 7436 GESPVDYDGGR True PC9_epitope_Rep3 1150.4890807032998 1150.48798993586 33.607 2 0.09473137473685693 0.0023651414536523243 0.010672356250717685 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 7980 13466 ATDFGEALV True H1975_Epitope_Rep2 921.4443623570098 921.44381496793 56.93 1 0.0947194036699363 0.0023651414536523243 0.01067521572005231 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 118409 14774 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 61.964 2 0.09471059624993194 0.0023651414536523243 0.010677319969983196 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 105875 4365 SSPGGVYATR True NCI_RA007_Epitope_Rep2 993.48795850449 993.48686993586 21.616 2 0.09470577098267048 0.0023651414536523243 0.010678472979761981 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 61996 9450 LLDPSQKNLY True H1975_Epitope_Rep1 1189.63428838501 1189.6331899358602 41.266 2 0.09470296284010545 0.0023651414536523243 0.010679144047016554 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000257591|ENST00000439556|ZNF625', 'ENSG00000277462|ENST00000366503|ZNF670'] 76690 19450 NQSELAVLL True PC9_epitope_Rep6 985.5444107514498 985.5438649679301 87.478 1 0.0947015229124534 0.0023651414536523243 0.010679488164865117 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 53236 14464 KQFGNILIL True NCI_RA007_Epitope_Rep4 1044.6331661861998 1044.63206993586 62.989 2 0.09469752536400747 0.0023651414536523243 0.010680443565205493 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 103721 5563 SPVFTSRSAA True PC9_epitope_Rep4 1021.51925863277 1021.51816993586 28.164 2 0.09469668092828494 0.0023651414536523243 0.010680645392839822 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 12076 19253 DHTVGFIL True PC9_epitope_Rep4 900.4705175351999 900.4699649679301 82.159 1 0.09469582954973309 0.0023651414536523243 0.01068084888354402 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 90825 9405 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.5496749679298 41.142 1 0.09469474647802956 0.0023651414536523243 0.010681107757296433 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 7571 13396 ASETGFLTY True H1975_Epitope_Rep2 987.4549270407099 987.4543749679301 56.662 1 0.09469093902282155 0.0023651414536523243 0.010682017855407816 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 29504 24099 FVFPGELLL True PC9_epitope_Rep3 1033.5848190114498 1033.5837299358602 97.98 2 0.09468802731804357 0.0023651414536523243 0.01068271389156508 ['ENSG00000105281|ENST00000542575|SLC1A5'] 72810 14845 MPFPNIRSA True PC9_epitope_Rep4 1031.5222358382298 1031.52112993586 65.041 2 0.09468123778651066 0.0023651414536523243 0.01068433708061221 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000537136.1_1_12:31255149-31256026:+|nuORF', 'ENST00000435753.6_1_12:31250908-31256767:+|nuORF', 'ENST00000536265.5_1_12:31242773-31256767:+|nuORF'] 130059 7094 VSDDGTLHM True H1975_Epitope_Rep2 973.41749598617 973.41638993586 32.219 2 0.09468009641760457 0.0023651414536523243 0.010684609973351676 ['ENSG00000141101|ENST00000268802|NOB1'] 35936 4699 GTSSVIVSR True NCI_RA007_Epitope_Rep1 904.4977949122 904.49668993586 22.361 2 0.09466750230316276 0.0023651414536523243 0.010687621571729826 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 130663 8718 VSTEVDARL True PC9_epitope_Rep6 988.5189242795998 988.51782993586 43.392 2 0.0946517477634044 0.0023651414536523243 0.01069139005109345 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 89875 6695 RAYADEVAV True NCI_RA007_Epitope_Rep3 992.4927095317598 992.49160993586 33.417 2 0.09465142810140266 0.0023651414536523243 0.010691466527189835 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 84211 21827 PYLDSFYEY True PC9_epitope_Rep5 1195.5073565363898 1195.50624993586 88.989 2 0.09465017325973882 0.0023651414536523243 0.010691766741163402 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 17277 15585 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 65.095 2 0.09464754966786225 0.0023651414536523243 0.010692394447007765 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 53985 13745 KVDIDVPDV True PC9_epitope_Rep4 998.5284263341399 998.5273299358599 60.767 2 0.09464387392220926 0.0023651414536523243 0.01069327394419631 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 119639 20839 VATWVDETL True PC9_epitope_Rep5 1032.51277627 1032.51166993586 85.207 2 0.09464261488966318 0.0023651414536523243 0.010693575209253943 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 84446 19107 QAFVIFKEV True PC9_epitope_Rep4 1079.60153170475 1079.6004299358601 81.586 2 0.0946423199098674 0.0023651414536523243 0.01069364579406513 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'SNRPA|p.S64I|1|0.49|ENSG00000077312|chr19:40757449-40757449|G/T|missense_variant'] 47589 7111 IVVPKAAIVAR True NCI_RA007_Epitope_Rep3 1135.7441136175098 1135.74247490379 35.088 3 0.09464143024613386 0.0023651414536523243 0.010693858681656364 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 142348 19230 YYEHEFVEL True PC9_epitope_Rep3 1227.5448046742697 1227.54370993586 79.188 2 0.09463823966623515 0.0023651414536523243 0.01069462218850953 ['nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 90829 9247 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.5496749679298 40.56 1 0.0946319538145536 0.0023651414536523243 0.010696126546623774 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 32777 11983 GHFAEVQVV True PC9_epitope_Rep4 984.5028802926399 984.50178993586 53.886 2 0.09462634221974085 0.0023651414536523243 0.010697469708583046 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 8629 18414 AVAAVLTQV True PC9_epitope_Rep1 870.5174677276199 870.51636993586 75.62 2 0.09461815993458624 0.0023651414536523243 0.010699428464971497 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 30177 9986 FYQEHPDL True PC9_epitope_Rep6 1047.4661604307498 1047.4650699358601 48.964 2 0.09461444457739528 0.0023651414536523243 0.010700317996532623 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 120179 4906 VEAPPPKVNP True H1975_Epitope_Rep3 1046.5760452329 1046.57494993586 23.998 2 0.09461321067974077 0.0023651414536523243 0.010700613432111664 ['ENSG00000155506|ENST00000518297|LARP1'] 98606 6303 SFSTVHEKF True NCI_RA007_Epitope_Rep4 1080.5240096600398 1080.52290993586 30.848 2 0.09460904742289178 0.0023651414536523243 0.010701610309625952 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 2513 6229 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.49668993586 28.921 2 0.09459595529519998 0.0023651414536523243 0.010704745750072957 ['ENSG00000146733|ENST00000275605|PSPH'] 2632 10361 AESEITIAP True H1975_Epitope_Rep2 929.4705771048499 929.47002496793 44.862 1 0.0945906662553352 0.0023651414536523243 0.010706012672695752 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 71852 15172 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51487496793 63.515 1 0.09458472964657746 0.0023651414536523243 0.010707434882096934 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 11792 18384 DHEGLGISI True PC9_epitope_Rep1 939.4661604307499 939.46506993586 75.504 2 0.09458396543397016 0.0023651414536523243 0.010707617974478579 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 4160 14114 AHTPVIISV True PC9_epitope_Rep2 935.54401682863 935.54290993586 59.562 2 0.09457883925083772 0.0023651414536523243 0.01070884619799475 ['ENSG00000182993|ENST00000330828|C12orf60'] 21342 19276 ERFLSQVL True PC9_epitope_Rep5 990.5498304850599 990.54872993586 79.188 2 0.09457658440529844 0.0023651414536523243 0.010709386497027438 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1'] 88528 12279 QTALVELLK True NCI_RA007_Epitope_Rep5 1013.6120963884499 1013.61098993586 53.884 2 0.09457631955289263 0.0023651414536523243 0.010709449961833366 ['CON__P02769'] 141433 15408 YTFDWTMLK True NCI_RA007_Epitope_Rep3 1203.5634319438698 1203.5623299358601 68.162 2 0.09457068350276904 0.0023651414536523243 0.010710800575512986 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 35798 13380 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 63.134 2 0.09456361400730685 0.0023651414536523243 0.010712494926649762 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 54632 7771 KYLEETNSL True NCI_RA007_Epitope_Rep4 1095.5448046742702 1095.54370993586 36.573 2 0.09455933036629555 0.0023651414536523243 0.010713521714019368 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 137085 18772 YAQGLLTGV True PC9_epitope_Rep4 920.4967322830399 920.49618496793 80.289 1 0.09455730429719601 0.0023651414536523243 0.010714007394728204 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 2630 7491 AESDHMAIP True H1975_Epitope_Rep3 969.42258136661 969.42148993586 33.795 2 0.09455236198072951 0.0023651414536523243 0.010715192233739934 ['ENSG00000160294|ENST00000291688|MCM3AP'] 27259 22760 FLPSYIIDV True PC9_epitope_Rep3 1065.57464825057 1065.57354993586 92.815 2 0.0945517179258433 0.0023651414536523243 0.010715346644472152 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 17706 6222 EHNELQQKL True PC9_epitope_Rep5 1137.57783613805 1137.57619490379 28.912 3 0.09455036089505069 0.0023651414536523243 0.010715671996524201 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1'] 96130 11915 RYNPNLNTW True PC9_epitope_Rep6 1176.5676058075198 1176.56650993586 57.07 2 0.09454633527623191 0.0023651414536523243 0.01071663720552872 ['ENSG00000178502|ENST00000319121|KLHL11'] 69894 11431 LVIITAGAR True PC9_epitope_Rep2 912.5756513100799 912.57454993586 49.289 2 0.0945426048763527 0.0023651414536523243 0.010717531704684962 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 85800 4619 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 25.074 2 0.09453937318142543 0.0023651414536523243 0.0107183066785683 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 109745 5899 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 27.676 2 0.09453603361618379 0.0023651414536523243 0.010719107576183577 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 13956 18604 DRDDFPVVL True PC9_epitope_Rep6 1074.53457434374 1074.53346993586 84.204 2 0.09453288656165242 0.0023651414536523243 0.010719862357781407 ['ENSG00000126458|ENST00000246792|RRAS'] 105518 5706 SSAGPGLLK True NCI_RA007_Epitope_Rep4 828.4705175352 828.46942993586 28.563 2 0.09453273604917783 0.0023651414536523243 0.010719898457578815 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 35979 5062 GTVIHFNNPK True NCI_RA007_Epitope_Rep3 1125.59309227937 1125.59143490379 26.905 3 0.09453051288516368 0.0023651414536523243 0.010720431687779157 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 14015 17067 DRFFSEYEKL True PC9_epitope_Rep4 1332.6350166609998 1332.6339099358602 73.647 2 0.09452834158290692 0.0023651414536523243 0.010720952503181369 ['ENSG00000135932|ENST00000258418|CAB39'] 54730 20702 KYMDVQFDF True PC9_epitope_Rep1 1191.52704643515 1191.5259499358601 84.456 2 0.09452817100301175 0.0023651414536523243 0.010720993420031865 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 108372 16323 SYLENVDHF True PC9_epitope_Rep4 1122.49818883502 1122.49708993586 70.75 2 0.09452725228617433 0.0023651414536523243 0.010721213794390934 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 127647 10249 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 44.306 1 0.09452465538785193 0.0023651414536523243 0.010721836740637224 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 8496 2652 ATSAPLVSR True NCI_RA007_Epitope_Rep5 900.50288029264 900.50178993586 14.89 2 0.09452154688246553 0.0023651414536523243 0.010722582456889956 ['ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'ENST00000497509.1_1_22:46926386-46930076:-|nuORF', 'ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 35883 5578 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep5 1016.46708941132 1016.46598993586 28.143 2 0.0945181818983067 0.0023651414536523243 0.010723389756817235 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 48008 15686 IYLEKLKTI True PC9_epitope_Rep3 1119.69034670915 1119.68924993586 65.479 2 0.09451046645739065 0.0023651414536523243 0.010725241001508847 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 89397 23285 QYAPLLAVF True PC9_epitope_Rep3 1020.5644179200399 1020.56387496793 94.846 1 0.0945043193018532 0.0023651414536523243 0.010726716168943284 ['ENSG00000136261|ENST00000258761|BZW2'] 2514 6338 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.49668993586 29.309 2 0.09450363682734982 0.0023651414536523243 0.01072687995808023 ['ENSG00000146733|ENST00000275605|PSPH'] 35240 13553 GRAPQVLVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 63.862 2 0.09449126273748636 0.0023651414536523243 0.010729850066093777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 4607 8262 AKVTAEVVL True NCI_RA007_Epitope_Rep3 928.5593325395998 928.55822993586 39.625 2 0.09449120589912337 0.0023651414536523243 0.010729863710604297 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 102962 9057 SPFAEGTSA True PC9_epitope_Rep2 865.38176210045 865.3812149679301 40.184 1 0.09449030489755936 0.0023651414536523243 0.010730080005548832 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 57957 8428 LEGPVPEGA True H1975_Epitope_Rep2 867.4337976733099 867.43324496793 37.37 1 0.09448212946463262 0.0023651414536523243 0.010732042794075972 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'AHNAK2|p.K5101Nfs*13|1|0.13|ENSG00000185567|chr14:104940151-104940151|G/-|frameshift_variant', 'AHNAK2|p.T5409Lfs*2|1|0.29|ENSG00000185567|chr14:104939227-104939227|G/-|frameshift_variant'] 110006 16171 TEIPEFPIA True H1975_Epitope_Rep2 1015.5226126777098 1015.52150993586 67.413 2 0.09447769643570862 0.0023651414536523243 0.010733107234984064 ['nc|ENSG00000154582|Q15369-2|ELOC', 'ENSG00000154582|ENST00000520242|ELOC'] 25547 20284 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54788496793 84.059 1 0.09447610621526151 0.0023651414536523243 0.010733489096724388 ['ENSG00000125356|ENST00000371437|NDUFA1'] 33022 6840 GIHETTFNS True PC9_epitope_Rep5 1004.4563240230401 1004.45522993586 31.281 2 0.0944741323906402 0.0023651414536523243 0.010733963091810142 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000437653.1_1_3:175695464-175695797:-|nuORF', 'ENST00000418351.1_1_15:44281261-44281585:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 12066 15261 DHTLGNII True PC9_epitope_Rep4 881.46068112749 881.45958993586 66.632 2 0.09447397643624357 0.0023651414536523243 0.010734000543613774 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 111704 23841 TIFSEFITI True PC9_epitope_Rep1 1069.5695628701299 1069.56846993586 96.503 2 0.09446665757001396 0.0023651414536523243 0.010735758278820619 ['nc|ENSG00000188343|A1XBS5-4|CIBAR1', 'nc|ENSG00000188343|A1XBS5-3|CIBAR1', 'ENSG00000188343|ENST00000518322|CIBAR1', 'ENST00000528023.3_1_15:41455975-41456569:+|nuORF'] 126848 15266 VLQALEGLK True PC9_epitope_Rep5 969.5858816406098 969.58478993586 63.73 2 0.09446441053295025 0.0023651414536523243 0.010736297993292409 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 111544 7170 TIAPALVSK True NCI_RA007_Epitope_Rep4 898.5487678559 898.54766993586 34.203 2 0.09446328563343344 0.0023651414536523243 0.010736568191916176 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 85020 6850 QEHENIIVA True NCI_RA007_Epitope_Rep4 1051.52982331647 1051.5287299358602 32.97 2 0.09446158213549298 0.0023651414536523243 0.010736977381038085 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 90267 9814 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54436993586 42.733 2 0.09445824742162656 0.0023651414536523243 0.010737778439687078 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 104195 20977 SQFQQEFPSL True PC9_epitope_Rep3 1209.5666027480097 1209.56550993586 85.97 2 0.09445235551987698 0.0023651414536523243 0.010739193920061108 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 96436 18176 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41211496793 74.924 1 0.09445056822328239 0.0023651414536523243 0.010739623338267142 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 8380 6829 ATLNSIVAK True NCI_RA007_Epitope_Rep4 915.5389314481899 915.53782993586 32.889 2 0.09444878142007582 0.0023651414536523243 0.010740052654249965 ['ENSG00000007944|ENST00000356840|MYLIP'] 27884 20984 FQDQQILTL True PC9_epitope_Rep2 1104.58152453616 1104.5804299358601 86.166 2 0.094448601844785 0.0023651414536523243 0.010740095801785445 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 41231 10467 HVLEEVQQV True PC9_epitope_Rep4 1079.56112344475 1079.56002993586 47.973 2 0.0944432669228215 0.0023651414536523243 0.010741377727792217 ['ENSG00000136026|ENST00000378026|CKAP4'] 114800 17778 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 76.411 2 0.09443622120516906 0.0023651414536523243 0.01074307096306357 ['ENSG00000119616|ENST00000341162|FCF1'] 109695 5461 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44567496793 26.032 1 0.09443011739018446 0.0023651414536523243 0.010744538044313181 ['ENSG00000179409|ENST00000319004|GEMIN4'] 32842 12865 GHNAIINTL True PC9_epitope_Rep5 951.5137793295102 951.51268993586 54.494 2 0.09442633930412013 0.0023651414536523243 0.010745446220883728 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 65363 7821 LRDQSAVVV True PC9_epitope_Rep2 985.5556441414899 985.55454993586 35.452 2 0.0944237295153346 0.0023651414536523243 0.010746073604698621 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 129931 11851 VRTPYTMSY True PC9_epitope_Rep4 1116.52738078832 1116.5262899358602 53.361 2 0.0944151161119809 0.0023651414536523243 0.010748144482969419 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 97860 11485 SELPTTVTV True H1975_Epitope_Rep1 945.50187723313 945.50132496793 49.16 1 0.09441473319073766 0.0023651414536523243 0.01074823655565182 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 138308 11913 YHDIAQQAF True PC9_epitope_Rep2 1091.50360856863 1091.5025099358602 51.148 2 0.09441366239659393 0.0023651414536523243 0.01074849403004125 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 136328 14243 WTAELGIRHV True PC9_epitope_Rep5 1180.63529144452 1180.6336349037902 59.791 3 0.09441070740898096 0.0023651414536523243 0.010749204592580006 ['ENSG00000108106|ENST00000264552|UBE2S'] 80179 15456 PFVDHVFTF True NCI_RA007_Epitope_Rep5 1107.53893144819 1107.5378299358601 66.15 2 0.09440831892062188 0.0023651414536523243 0.010749778966154094 ['ENSG00000113460|ENST00000336767|BRIX1'] 108600 22875 SYPDLLPTF True PC9_epitope_Rep5 1051.52261267771 1051.5215099358602 92.987 2 0.0944059336360424 0.0023651414536523243 0.010750352598417254 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 109146 15936 TAMDVVYAL True NCI_RA007_Epitope_Rep4 981.4841189940099 981.48302993586 69.166 2 0.09440440475517989 0.0023651414536523243 0.010750720291187746 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 134404 23734 VYPGLAVFF True PC9_epitope_Rep1 1011.5429541994698 1011.54184993586 96.086 2 0.09440373963841563 0.0023651414536523243 0.010750880254163138 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 105116 13590 SREPSQVIF True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 57.331 2 0.09438497226706623 0.0023651414536523243 0.010755394807370025 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 17254 6859 EHAGGEVEL True PC9_epitope_Rep4 939.42977492203 939.42866993586 33.602 2 0.09438085421302266 0.0023651414536523243 0.010756385659982496 ['ENSG00000218891|ENST00000325421|ZNF579'] 116354 11778 TTEVVNELY True H1975_Epitope_Rep2 1066.51825557326 1066.51714993586 50.378 2 0.09437818071161329 0.0023651414536523243 0.01075702898256844 ['ENSG00000113719|ENST00000393784|ERGIC1'] 37866 15194 GYPLWKVTF True NCI_RA007_Epitope_Rep3 1109.59096702105 1109.5898699358602 67.287 2 0.09437470411816756 0.0023651414536523243 0.010757865607285727 ['ENSG00000198805|ENST00000361505|PNP'] 76601 17979 NQMDGFDTL True PC9_epitope_Rep6 1039.4280606698699 1039.4269699358601 81.784 2 0.09437105150635694 0.0023651414536523243 0.01075874465657442 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 135199 15900 WESEPHPYVFF True H1975_Epitope_Rep3 1436.6401020414398 1436.63900993586 66.608 2 0.09437072983933815 0.0023651414536523243 0.010758822073263796 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 134904 17906 VYVSDIQEL True PC9_epitope_Rep6 1064.5389910178399 1064.5378899358602 81.499 2 0.09436910247665259 0.0023651414536523243 0.010759213744262858 ['ENSG00000132182|ENST00000254508|NUP210'] 53786 11453 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep1 1213.59004099497 1213.58894993586 49.034 2 0.09435909639294231 0.0023651414536523243 0.010761622290115357 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 142328 10386 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 45.272 2 0.09435641923456002 0.0023651414536523243 0.01076226679085822 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 121814 15188 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 66.344 2 0.09435385518634577 0.0023651414536523243 0.010762884095792225 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 1280 9138 AEDLPVTEA True H1975_Epitope_Rep3 943.44984166027 943.4492949679301 40.138 1 0.09435021884912248 0.0023651414536523243 0.010763759616344667 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 29391 16138 FVDPNGKISL True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 67.332 2 0.09434440823259274 0.0023651414536523243 0.010765158778449493 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 17807 7318 EHSTEGSVSL True PC9_epitope_Rep1 1044.47236801 1044.4712699358602 32.962 2 0.09434397002766669 0.0023651414536523243 0.0107652643026159 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 142121 21244 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58920993586 89.88 2 0.09433903606591172 0.0023651414536523243 0.010766452518247364 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 45825 8578 ISDGKMQLY True H1975_Epitope_Rep2 1053.51648175145 1053.5153899358602 37.949 2 0.09433287160885287 0.0023651414536523243 0.010767937241685451 ['ZNF607|p.K428Rfs*97|1|0.38|ENSG00000198182|chr19:37698850-37698850|C/-|frameshift_variant', 'nc|ENSG00000198182|Q96SK3-3|ZNF607', 'ENSG00000198182|ENST00000355202|ZNF607'] 38344 7325 HEIEGTGLP True H1975_Epitope_Rep2 951.4661604307499 951.46561496793 33.116 1 0.09432623589140525 0.0023651414536523243 0.010769535686789298 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 120676 12507 VEIPDPVEA True H1975_Epitope_Rep2 967.4862271689899 967.4856749679301 53.199 1 0.09431869216770425 0.0023651414536523243 0.010771353131005433 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 26706 19696 FIVHTIEEI True PC9_epitope_Rep3 1099.5913609438699 1099.59026993586 80.991 2 0.09431677932439454 0.0023651414536523243 0.010771814022165946 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 96274 4391 RYQTKFRHL True NCI_RA007_Epitope_Rep4 1247.6887239997097 1247.68708490379 23.243 3 0.09431584190173191 0.0023651414536523243 0.010772039896867827 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'nc|ENSG00000121289|Q96ST8-3|CEP89'] 25452 4715 FEEGVGKPA True H1975_Epitope_Rep3 932.4603467743198 932.45924993586 23.262 2 0.09431558652062061 0.0023651414536523243 0.010772101432465635 ['ENSG00000116903|ENST00000366645|EXOC8'] 9883 15783 AYLIQVHKW True PC9_epitope_Rep5 1156.6393141958 1156.63765490379 65.702 3 0.09431447139677977 0.0023651414536523243 0.010772370132103375 ['ENSG00000110536|ENST00000326674|PTPMT1', 'ENST00000534775.1_1_11:47587445-47593178:+|nuORF'] 17249 12068 EHAFAVQQL True PC9_epitope_Rep6 1041.5243440132099 1041.5232499358601 57.736 2 0.09431416056924356 0.0023651414536523243 0.010772445030073982 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 75389 12048 NITRALIVV True H1975_Epitope_Rep2 997.6284151589299 997.62730993586 51.422 2 0.09430833442346111 0.0023651414536523243 0.01077384900790293 ['ENSG00000099817|ENST00000615234|POLR2E', 'ENST00000586817.5_1_19:1089487-1094188:-|nuORF'] 31589 12395 GEEMPGLSV True H1975_Epitope_Rep3 917.4164333570099 917.4158849679301 52.866 1 0.09430172273667159 0.0023651414536523243 0.010775442495199726 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 96045 16130 RYLQDLLAW True NCI_RA007_Epitope_Rep3 1176.6291434349198 1176.6280499358602 71.148 2 0.09430013674653848 0.0023651414536523243 0.010775824769116878 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 7373 12674 ARSDSWSL True PC9_epitope_Rep5 920.43519465564 920.43408993586 53.756 2 0.09429796812831272 0.0023651414536523243 0.010776347495746966 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF', 'ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000570934.5_1_17:4098183-4145738:-|nuORF'] 88060 14642 QRQQLLVSL True PC9_epitope_Rep6 1083.64004247179 1083.6389499358602 68.239 2 0.09429685999656731 0.0023651414536523243 0.010776614610606734 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 52885 11183 KPFKEFVEA True PC9_epitope_Rep5 1093.5807962601698 1093.5796899358602 48.004 2 0.0942937871167496 0.0023651414536523243 0.010777355360389106 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 27833 11064 FQDEVAKAQQL True PC9_epitope_Rep4 1275.64591569787 1275.6448099358602 50.334 2 0.09429231804935734 0.0023651414536523243 0.010777709511532556 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 75751 19694 NLLKLIAEV True PC9_epitope_Rep6 1011.6328318330299 1011.63172993586 88.41 2 0.09429177046408665 0.0023651414536523243 0.010777841521887377 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 8318 4841 ATIQGAYAR True NCI_RA007_Epitope_Rep1 949.4981292653698 949.49702993586 22.91 2 0.09428497206693366 0.0023651414536523243 0.010779480588830824 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 97275 9046 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 39.748 1 0.09428204040197702 0.0023651414536523243 0.010780187474897474 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 12091 7348 DHVTATQL True PC9_epitope_Rep5 883.4399456829101 883.43884993586 33.223 2 0.09428118289182479 0.0023651414536523243 0.010780394246956076 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 40422 11530 HQYDGLVEL True NCI_RA007_Epitope_Rep5 1072.5189242795998 1072.5178299358602 51.001 2 0.09428063811324353 0.0023651414536523243 0.010780525611777598 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 131065 6402 VTDSIRDEY True H1975_Epitope_Rep3 1096.5036681382799 1096.50307496793 29.602 1 0.09427179320899201 0.0023651414536523243 0.010782658634816046 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 39033 4254 HHSDGSVSL True PC9_epitope_Rep1 937.42535824793 937.42426993586 21.256 2 0.09426866064008989 0.0023651414536523243 0.010783414176350268 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 9919 20985 AYLPKILQI True PC9_epitope_Rep3 1057.65356727761 1057.6524699358602 85.995 2 0.09426203077762994 0.0023651414536523243 0.010785013393006861 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 108761 20316 SYSMIVNNL True PC9_epitope_Rep2 1039.50083168731 1039.4997299358602 83.569 2 0.09424890821819099 0.002394447307004516 0.010788179404830478 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 44197 23008 IIYPGAFVDL True PC9_epitope_Rep5 1106.60119735158 1106.60010993586 93.491 2 0.09424806406058388 0.002394447307004516 0.010788383100597654 ['ENSG00000012174|ENST00000379484|MBTPS2'] 72342 21713 M[Oxidation]IPLLLAAL True PC9_epitope_Rep6 969.5932759006099 969.5921699358599 96.405 2 0.09424593249009311 0.002394447307004516 0.010788897466183361 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 129698 11500 VRPPVQVY True PC9_epitope_Rep5 956.5443511817998 956.54324993586 49.231 2 0.09423881799714592 0.002394447307004516 0.010790614420918736 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 107567 8969 SVPEGPWWRK True NCI_RA007_Epitope_Rep5 1240.63529144452 1240.6336349037902 41.157 3 0.09422538097044454 0.002394447307004516 0.01079385791385017 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 85864 10107 QHFDSVM[Oxidation]QL True PC9_epitope_Rep6 1119.5018946969099 1119.5007899358602 49.483 2 0.09422369018707533 0.002394447307004516 0.010794266108757646 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 674 13873 AATSLITTL True H1975_Epitope_Rep3 889.5120479940101 889.51149496793 58.671 1 0.09422182783603072 0.002394447307004516 0.010794715741123371 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 8404 15634 ATLSKIIQV True PC9_epitope_Rep2 971.6015317047498 971.60042993586 65.413 2 0.09421790560508957 0.002394447307004516 0.010795662754002225 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 100515 21984 SLASLLVSV True PC9_epitope_Rep4 887.5327834385901 887.53168993586 92.78 2 0.09421174553615899 0.002394447307004516 0.010797150246697846 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 53304 12357 KQLDENISL True PC9_epitope_Rep4 1058.56078909158 1058.5596899358602 55.337 2 0.09420999022004964 0.002394447307004516 0.010797574144485492 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1', 'HEATR1|p.E368Rfs*31|1|0.02|ENSG00000119285|chr1:236594103-236594104|-/T|frameshift_variant', 'HEATR1|p.E403Gfs*12|1|0.25|ENSG00000119285|chr1:236592619-236592620|-/GAATTGTACAGAGACTGTC|frameshift_variant', 'HEATR1|p.I99Ffs*19|1|0.17|ENSG00000119285|chr1:236603224-236603224|T/-|frameshift_variant'] 6274 4494 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 23.761 2 0.09420068624604294 0.002394447307004516 0.01079982125977976 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 97277 9075 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39630993586 39.859 2 0.09419566179999428 0.002394447307004516 0.010801034959355992 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 140667 15676 YRTEFTTAL True PC9_epitope_Rep5 1100.55022440788 1100.54912993586 65.309 2 0.09419301396671946 0.002394447307004516 0.010801674619168897 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 110944 10807 THAAQQILL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 49.327 2 0.09419076507386577 0.002394447307004516 0.010802217931798478 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 120320 6137 VEEADAAMA True H1975_Epitope_Rep2 905.3800478482899 905.3794949679301 28.583 1 0.09418528447663274 0.0024237283000575634 0.010803542104423317 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 6129 13728 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 60.702 2 0.09418236539869126 0.0024237283000575634 0.010804247448761213 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 9137 23242 AVLALITLG True PC9_epitope_Rep2 869.55860426361 869.55805496793 94.883 1 0.09417647110290325 0.0024237283000575634 0.010805671836098086 ['nc|ENSG00000166086|Q9BX67-2|JAM3', 'ENSG00000166086|ENST00000299106|JAM3'] 18410 20221 EIVTTIPTI True PC9_epitope_Rep4 985.56956287013 985.56901496793 85.919 1 0.09417361157736745 0.0024237283000575634 0.0108063629196657 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 114631 19364 TQDTPIPAL True PC9_epitope_Rep5 954.5022115862998 954.50110993586 79.53 2 0.09417020614077809 0.0024237283000575634 0.010807185992571073 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 102389 13267 SLTGRLDEV True PC9_epitope_Rep1 988.5189242795999 988.51782993586 55.896 2 0.09416466726107453 0.0024237283000575634 0.010808524832723964 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 27441 22305 FLYPFPLAL True PC9_epitope_Rep6 1079.60555445603 1079.6044499358602 98.766 2 0.09416041106719601 0.0024237283000575634 0.010809553733306812 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 105225 15007 SRIDIANTL True PC9_epitope_Rep5 1001.5505587610501 1001.54946993586 62.728 2 0.09415659621520585 0.0024237283000575634 0.01081047602215924 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 132204 16547 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 68.885 2 0.09415584600817868 0.0024237283000575634 0.010810657403023432 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 108651 15536 SYPSAFSKL True PC9_epitope_Rep5 998.50729696674 998.50618993586 64.769 2 0.09415580388163348 0.0024237283000575634 0.010810667588229982 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 52877 11515 KPFGQVIST True PC9_epitope_Rep5 975.5389314481899 975.53782993586 49.288 2 0.09415423880966996 0.0024237283000575634 0.010811045992237145 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 17984 5183 EIDKNDHLY True H1975_Epitope_Rep3 1145.53530261973 1145.53366490379 25.032 3 0.09415291382690133 0.0024237283000575634 0.010811366357180144 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 33722 19844 GLIDGVVEA True PC9_epitope_Rep2 871.46509780159 871.46454496793 81.721 1 0.09415002979739301 0.0024237283000575634 0.010812063712123515 ['ENSG00000104824|ENST00000221419|HNRNPL'] 26281 11241 FHGAPLTV True PC9_epitope_Rep4 840.4493881678001 840.44828993586 51.013 2 0.09414444375712867 0.0024237283000575634 0.010813414531692187 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 120570 9790 VEGPAFTDAIR True H1975_Epitope_Rep1 1174.59823722946 1174.5971499358602 42.585 2 0.09414138663792762 0.0024538018782187215 0.010814153873985159 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 65931 14665 LSDSFSDLY True H1975_Epitope_Rep1 1045.46040634397 1045.4593099358601 61.623 2 0.09413053328917456 0.0024538018782187215 0.010816779066425612 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 92998 10927 RPKPSSSPVIF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 46.916 3 0.09412588985034348 0.0024538018782187215 0.010817902399753545 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 55043 16118 KYSNMEQSLF True PC9_epitope_Rep2 1245.5699738762899 1245.5688699358602 67.256 2 0.09411041724756648 0.0024634241595818188 0.010821646307528002 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 76509 14965 NQIKEFIYA True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 65.501 2 0.09410520783660715 0.0024634241595818188 0.01082290710649094 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 124941 13670 VHSEQVFAL True PC9_epitope_Rep6 1028.5290950404797 1028.5279899358602 64.367 2 0.09410393585064865 0.0024634241595818188 0.010823214977968103 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 21777 13936 ERVPINDVL True PC9_epitope_Rep6 1053.58185888933 1053.5807699358602 65.449 2 0.09409496400099707 0.0024634241595818188 0.010825386760852075 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 58569 11484 LEQNIQLPA True H1975_Epitope_Rep2 1024.5553097883198 1024.5542099358602 49.228 2 0.09409072514300675 0.0024634241595818188 0.010826412989793623 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 57422 14400 LEATINELV True H1975_Epitope_Rep1 1000.5440763982799 1000.54357496793 60.586 1 0.09408941974026255 0.0024634241595818188 0.010826729046857471 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 26228 10625 FHDPDSAVV True PC9_epitope_Rep5 985.4505103666099 985.44940993586 45.856 2 0.09408738344580181 0.0024634241595818188 0.010827222080986063 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 116361 21696 TTFEDFVAI True PC9_epitope_Rep4 1041.5018772331298 1041.5007899358602 91.656 2 0.09408024731783889 0.0024634241595818188 0.010828950071547497 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 77899 20393 NVIDYIDTI True PC9_epitope_Rep6 1064.53899101784 1064.5378899358602 91.14 2 0.09407884478061584 0.0024634241595818188 0.010829289722268551 ['ENSG00000156017|ENST00000376834|CARNMT1'] 991 6760 AEAAGAVQV True H1975_Epitope_Rep2 814.41848196234 814.41738993586 30.917 2 0.09407190620629294 0.0024634241595818188 0.010830970177262941 ['ENSG00000181004|ENST00000314218|BBS12'] 32734 14602 GHAEVVNLL True PC9_epitope_Rep4 950.5185303567799 950.51742993586 64.094 2 0.09406541530367683 0.0024634241595818188 0.010832542434903258 ['ENSG00000107854|ENST00000371627|TNKS2'] 97692 9171 SEIDMNDIKA True NCI_RA007_Epitope_Rep4 1134.5226893307001 1134.5215899358602 42.116 2 0.09405782603029392 0.0024634241595818188 0.010834381020270576 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 36801 19798 GVLDTLTKV True PC9_epitope_Rep3 944.55424715916 944.55314993586 81.385 2 0.0940572453381224 0.0024634241595818188 0.01083452171158193 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 78467 18487 NYMPGQLTI True PC9_epitope_Rep6 1035.5059170677498 1035.50480993586 83.75 2 0.09405593482464089 0.0024634241595818188 0.01083483923190465 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 90450 5826 REIVMTQSP True NCI_RA007_Epitope_Rep3 1059.5382798251899 1059.5371899358602 29.895 2 0.09405419947827919 0.0024634241595818188 0.010835259697301763 ['nc|ENSG00000243063|A0A075B6H7|IGKV3-7'] 89637 21542 QYSPLLAAF True PC9_epitope_Rep4 1008.5280324113198 1008.5274749679301 91.04 1 0.09405281463782358 0.0024634241595818188 0.010835595248066437 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 76345 14618 NPVDILTY True H1975_Epitope_Rep3 933.4807478657301 933.4801949679301 61.595 1 0.09405205447839289 0.0024634241595818188 0.01083577944104787 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 5563 13982 [Acetylation]-AM[Oxidation]VSEFLK True H1975_Epitope_Rep3 981.4841196907499 981.48357496793 59.1 1 0.09404963916450544 0.0024634241595818188 0.01083636471153243 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 4092 6674 AHQQSIPAV True PC9_epitope_Rep4 949.4981292653698 949.49702993586 32.847 2 0.09404509398914165 0.0024634241595818188 0.010837466164128706 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 97459 11416 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.45890993586 48.892 2 0.09404236901776501 0.0024634241595818188 0.010838126569600093 ['ENSG00000135900|ENST00000258383|MRPL44'] 116918 9107 TVFSHAQTV True PC9_epitope_Rep5 988.4977949121999 988.49668993586 39.976 2 0.09403773415112332 0.0024634241595818188 0.010839249932108731 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 96519 11026 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44906993586 47.441 2 0.09402956438768782 0.0024634241595818188 0.010841230324529102 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 25733 6925 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 31.558 2 0.09402874758650706 0.0024634241595818188 0.010841428340218255 ['ENSG00000084774|ENST00000264705|CAD'] 99286 7436 SHQTGVVAL True PC9_epitope_Rep6 910.4872302284999 910.48612993586 37.832 2 0.09402861639665125 0.0024634241595818188 0.010841460144667128 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 75162 5907 NHYQKQLEI True PC9_epitope_Rep6 1171.5985715826298 1171.59691490379 30.99 3 0.09401654283486295 0.0024634241595818188 0.010844387526349544 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 142496 16306 YYIFIPSKF True NCI_RA007_Epitope_Rep2 1176.6219327961599 1176.62082993586 68.156 2 0.09401603889093618 0.0024634241595818188 0.010844509730005112 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 97613 4402 SEEYPNKPP True H1975_Epitope_Rep2 1059.48728979815 1059.48618993586 22.042 2 0.09401383245275102 0.0024634241595818188 0.010845044794648425 ['ENSG00000119048|ENST00000265339|UBE2B'] 128949 18982 VQIGDIVTV True PC9_epitope_Rep6 942.5385970950199 942.5380449679301 85.657 1 0.09401103683188516 0.0024634241595818188 0.01084572277302851 ['ENSG00000142534|ENST00000270625|RPS11'] 21863 11095 ESDEVELSY True H1975_Epitope_Rep1 1069.44515020265 1069.4440499358602 47.642 2 0.09400946068261179 0.0024634241595818188 0.010846105029715617 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 118150 10623 TYIPVPAKI True NCI_RA007_Epitope_Rep3 1000.5957180483199 1000.59462993586 48.834 2 0.09400888873032459 0.0024634241595818188 0.010846243746003726 ['ENSG00000008513|ENST00000522652|ST3GAL1', 'ST3GAL1|p.R238T|1|0.07|ENSG00000008513|chr8:133463430-133463430|C/G|missense_variant'] 88836 5993 QVASTLKQV True PC9_epitope_Rep2 972.5603951687598 972.55928993586 28.44 2 0.09400058336102851 0.0024634241595818188 0.010848258247392972 ['ENSG00000166295|ENST00000299381|ANAPC16'] 109677 4320 TEAVPRAPA True H1975_Epitope_Rep3 910.4872302284998 910.48612993586 21.733 2 0.09399219425151319 0.0024634241595818188 0.010850293421287814 ['ENSG00000168476|ENST00000306306|REEP4'] 48917 9659 KEEDAFHFV True H1975_Epitope_Rep2 1120.5189242795998 1120.5178299358602 42.134 2 0.09399118773232383 0.0024634241595818188 0.010850537624331892 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 142564 21155 YYLNEIQSF True PC9_epitope_Rep2 1175.5498900547097 1175.54937496793 86.826 1 0.09398671559839784 0.0024634241595818188 0.010851622722663176 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'SPATC1L|p.G188C|1|0.21|ENSG00000160284|chr21:46162050-46162050|C/A|missense_variant'] 26405 14020 FHYEADGANVL True PC9_epitope_Rep6 1234.5618517207397 1234.56074993586 65.781 2 0.09398208947433484 0.0024634241595818188 0.010852745292975653 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 32335 21313 GFGFVLFK True PC9_epitope_Rep5 913.5061747679299 913.50506993586 87.034 2 0.09398171891974792 0.0024634241595818188 0.010852835216128773 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 103942 17859 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51289496793 73.893 1 0.09397754094760688 0.0024634241595818188 0.010853849141198415 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 100876 4455 SLESINSR True NCI_RA007_Epitope_Rep5 904.46140940348 904.46030993586 23.781 2 0.09397618474930561 0.0024634241595818188 0.010854178287556054 ['ENSG00000156482|ENST00000287038|RPL30'] 29553 22964 FVIDGFDEL True PC9_epitope_Rep1 1053.50187723313 1053.50137496793 93.131 1 0.093968779463289 0.0024634241595818188 0.01085597570156523 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 72181 19211 MGLERLVSV True PC9_epitope_Rep5 1002.55320161334 1002.55210993586 78.934 2 0.09396446037625414 0.0024634241595818188 0.010857024162706156 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 16114 9122 EEALPVTTA True H1975_Epitope_Rep1 929.47057710485 929.46948993586 39.991 2 0.09396380251148605 0.0024634241595818188 0.010857183868244007 ['ENSG00000184897|ENST00000333762|H1-10'] 103937 17394 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51289496793 72.166 1 0.09395849551869313 0.0024634241595818188 0.010858472293910662 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 130886 11041 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.4329149679301 47.499 1 0.09395836250711129 0.0024634241595818188 0.010858504588177446 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 135091 8170 WEDFKQNTP True H1975_Epitope_Rep3 1163.5247379360299 1163.52364993586 36.405 2 0.09395714092998063 0.0024634241595818188 0.010858801182691667 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 117285 14632 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59944993586 61.105 2 0.09395543788994107 0.0024634241595818188 0.010859214687508955 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 68020 17659 LTDILGIEDY True H1975_Epitope_Rep2 1150.57577044938 1150.5746699358601 73.247 2 0.09395497633537686 0.0024634241595818188 0.010859326757349035 ['ENSG00000138035|ENST00000447944|PNPT1', 'ENST00000481066.1_1_2:55872466-55874499:-|nuORF', 'ENST00000260604.8_1_2:55870335-55906871:-|nuORF'] 35123 5041 GQVVTKTAL True NCI_RA007_Epitope_Rep5 915.5389314481899 915.53782993586 26.091 2 0.09395180040900908 0.0024634241595818188 0.010860097932293231 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 110351 7690 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 34.545 2 0.09394117595483602 0.0024634241595818188 0.010862678128834213 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 132948 13476 VVPAALKVV True PC9_epitope_Rep4 894.59023874506 894.58914993586 59.732 2 0.09393987332777494 0.0024634241595818188 0.010862994517769353 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 64390 9183 LPLQDVYK True H1975_Epitope_Rep3 974.5436824754598 974.54258993586 40.313 2 0.09393809533159468 0.0024634241595818188 0.010863426380998733 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000514975.1_1_4:106406529-106406643:+|nuORF', 'ENST00000359165.5_1_12:19609713-19609968:-|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 12482 10688 DKDEIPTISSY True H1975_Epitope_Rep2 1266.59796244594 1266.59686993586 46.135 2 0.09393665703795205 0.0024634241595818188 0.01086377574471989 ['ENSG00000227729|ENST00000557640|RD3L'] 124855 14356 VHLDSAVAL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 60.483 2 0.09393551537518072 0.0024634241595818188 0.010864053063950543 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 105679 16633 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.51187496793 69.488 1 0.09393087739813331 0.0024634241595818188 0.010865179735710394 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 125948 15763 VLDELTLAR True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 65.899 2 0.09391286570989552 0.0024634241595818188 0.010869556243816296 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 26909 21149 FLDGNEMTL True PC9_epitope_Rep1 1038.46919720586 1038.46808993586 86.182 2 0.09391241098763145 0.0024634241595818188 0.010869666754618073 ['ENSG00000169504|ENST00000374379|CLIC4'] 109984 4930 TEIGSIHSA True NCI_RA007_Epitope_Rep3 913.45051036661 913.44940993586 26.385 2 0.09390149907686056 0.0024634241595818188 0.010872318988134443 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 28024 10859 FQPEANPSHL True PC9_epitope_Rep5 1138.54072235334 1138.5396299358601 46.756 2 0.0938991816998372 0.0024634241595818188 0.010872882325660664 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'ENST00000261509.10_1_4:169846154-169847533:+|nuORF'] 140658 17364 YRTDMIQAL True PC9_epitope_Rep3 1109.55392988933 1109.55282993586 71.962 2 0.0938933649350884 0.0024634241595818188 0.010874296461119625 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 98016 6025 SEQETLVRP True H1975_Epitope_Rep3 1057.54038800017 1057.53928993586 28.19 2 0.09389209752990467 0.0024634241595818188 0.010874604607927824 ['nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-5|MDM2', 'nc|ENSG00000135679|Q00987-9|MDM2'] 111908 15469 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.53308993586 64.512 2 0.09389142608533556 0.0024634241595818188 0.010874767860978178 ['ENSG00000213719|ENST00000375784|CLIC1'] 8325 4618 ATIQGAYAR True NCI_RA007_Epitope_Rep4 949.4981292653698 949.49702993586 24.179 2 0.09388557972539179 0.0024634241595818188 0.010876189426097726 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 93105 8604 RPNPPPVSV True PC9_epitope_Rep5 961.53451477409 961.53340993586 38.039 2 0.0938824394149379 0.0024634241595818188 0.010876953077673201 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 104133 3968 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 22.016 2 0.09387597389746119 0.0024634241595818188 0.01087852550387484 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 92072 4813 RKVKSTITL True NCI_RA007_Epitope_Rep2 1044.66552894364 1044.6644299358602 23.349 2 0.09387249637682851 0.0024634241595818188 0.010879371332866468 ['FABP9|p.D77V|1|0.19|ENSG00000205186|chr8:81459181-81459181|T/A|missense_variant', 'FABP4|p.G89V|1|0.68|ENSG00000170323|chr8:81479496-81479496|C/A|missense_variant', 'FABP9|p.M114Nfs*6|1|0.53|ENSG00000205186|chr8:81458609-81458610|-/T|frameshift_variant', 'ENSG00000205186|ENST00000379071|FABP9', 'ENSG00000170323|ENST00000256104|FABP4'] 107463 18379 SVLVSVSEV True PC9_epitope_Rep4 917.50696261357 917.50586993586 78.761 2 0.09387244867081078 0.0024634241595818188 0.01087938293672109 ['ENSG00000221926|ENST00000649191|TRIM16'] 103395 6378 SPPPPPPPP True H1975_Epitope_Rep2 881.4647038787699 881.46360993586 29.46 2 0.09386760305838913 0.0024634241595818188 0.01088056162879217 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 54419 12647 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64755490379 56.99 3 0.09386481416536145 0.0024634241595818188 0.010881240080224763 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 109736 4700 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 23.171 2 0.09386383025066167 0.0024634241595818188 0.010881479445838022 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 96497 8146 SADETWDSA True NCI_RA007_Epitope_Rep2 980.37231961556 980.37177496793 36.321 1 0.093851723329227 0.0024634241595818188 0.010884425213066304 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 119611 6959 VATVSLPR True H1975_Epitope_Rep2 841.5021520166499 841.50104993586 31.688 2 0.09384263366610288 0.0024634241595818188 0.010886637341152845 ['CON__P00761'] 104525 10979 SQNQVQVVL True NCI_RA007_Epitope_Rep4 1013.5505587610498 1013.54946993586 49.099 2 0.09383934734117073 0.0024634241595818188 0.010887437230794201 ['ENSG00000140688|ENST00000327237|RUSF1', 'nc|ENSG00000140688|Q96GQ5-2|RUSF1', 'ENST00000568491.1_1_16:31502158-31504599:-|nuORF'] 75164 7309 NHYSESTEL True PC9_epitope_Rep5 1078.45671794586 1078.45562993586 33.076 2 0.0938385426852592 0.0024634241595818188 0.01088763309210127 ['ENST00000443361.1_1_9:108285096-108287232:+|nuORF', 'ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1'] 117954 5447 TYAEKLHRL True PC9_epitope_Rep2 1129.62439240765 1129.6227449037901 26.346 3 0.0938351284659417 0.0024634241595818188 0.010888464184516132 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 137765 4884 YENPHYQSP True H1975_Epitope_Rep3 1133.47778774361 1133.4766899358601 23.912 2 0.09383419604117932 0.0024634241595818188 0.010888691166690672 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 32205 7909 GEYDHLPEQA True H1975_Epitope_Rep2 1157.4989171110099 1157.4978299358602 35.37 2 0.09383100190807878 0.0024634241595818188 0.010889468755493752 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 13253 10739 DLSTIEPLK True H1975_Epitope_Rep3 1014.5597264624199 1014.55862993586 46.386 2 0.09382871134166058 0.0024634241595818188 0.010890026409951337 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENSG00000139223|ENST00000266594|ANP32D', 'nc|ENSG00000248546|O43423|ANP32CP'] 5288 11076 ALQEMVHQV True PC9_epitope_Rep4 1053.52771514149 1053.52660993586 50.381 2 0.09382659489453801 0.0024634241595818188 0.010890541697964568 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 4182 17750 AHVTLLTSL True PC9_epitope_Rep2 953.5545815123301 953.55348993586 73.557 2 0.09382445753152074 0.0024634241595818188 0.01089106210184917 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C'] 132175 10955 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 50.179 2 0.09381995225970312 0.0024634241595818188 0.010892159120164804 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 49161 4790 KELEPLKEMTS True H1975_Epitope_Rep3 1303.66935356439 1303.66771490379 23.552 3 0.09381963416645972 0.0024634241595818188 0.010892236578752285 ['ENSG00000120162|ENST00000262244|MOB3B'] 58384 9055 LENLVNQAA True H1975_Epitope_Rep3 970.5083595959 970.50726993586 39.815 2 0.09381881739345335 0.0024634241595818188 0.01089243547277872 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 111405 9116 THSLETQEL True PC9_epitope_Rep5 1056.5087535187201 1056.5076499358602 40.01 2 0.09381209348547165 0.0024634241595818188 0.010894072956185677 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 108273 21473 SYIEHIFEI True PC9_epitope_Rep5 1149.57062549929 1149.57007496793 87.63 1 0.09379844949804186 0.0024634241595818188 0.010897396415811058 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 52513 19334 KLAPPLVTL True PC9_epitope_Rep1 950.6164534929001 950.61534993586 79.174 2 0.09379760199732394 0.0024634241595818188 0.010897602885361509 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 97605 11303 SEEVTPIAV True H1975_Epitope_Rep2 943.4862271689899 943.4856749679301 48.525 1 0.09379701705071732 0.0024634241595818188 0.010897745393205765 ['ENSG00000205339|ENST00000379719|IPO7'] 104273 17326 SQIHDIVLV True PC9_epitope_Rep1 1022.5760452328999 1022.5754749679301 71.458 1 0.09379659957154411 0.0024634241595818188 0.010897847102814339 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 82419 7828 PPPAPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 37.518 2 0.09379296742938643 0.0024634241595818188 0.010898732032338808 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'DGKK|p.A42P|1|0.95|ENSG00000274588|chrX:50470555-50470555|C/G|missense_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'BOD1L1|p.L1167Ffs*9|1|0.15|ENSG00000038219|chr4:13603380-13603399|AATCTGCTGTGCAAGTTCTC/-|frameshift_variant', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 35112 7403 GQVTEAVKV True PC9_epitope_Rep2 929.5181960036099 929.51708993586 33.854 2 0.09379072077370784 0.0024634241595818188 0.01089927943824681 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 132703 14119 VVHDGFEGL True PC9_epitope_Rep5 971.47124581119 971.47014993586 59.319 2 0.09379057356445225 0.0024634241595818188 0.010899315307234538 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 8324 4535 ATIQGAYAR True NCI_RA007_Epitope_Rep4 949.4981292653698 949.49702993586 23.841 2 0.0937889964648229 0.0024634241595818188 0.010899699590158856 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 1299 8003 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 35.754 2 0.09378256128391715 0.0024634241595818188 0.010901267747637385 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 114838 19714 TQNDIISTL True PC9_epitope_Rep1 1003.51858992643 1003.51748993586 80.655 2 0.09378178038387966 0.0024634241595818188 0.010901458055897907 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 100442 20557 SLAGGIIGV True PC9_epitope_Rep3 785.46470387877 785.4641549679301 84.336 1 0.09377904948912276 0.0024634241595818188 0.010902123609988774 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 134398 17059 VYPGDPLRF True PC9_epitope_Rep6 1062.5498304850598 1062.5487299358601 78.182 2 0.09377103413487668 0.0024634241595818188 0.010904077277614634 ['ENSG00000170892|ENST00000396388|TSEN34'] 76135 10689 NMVAKVDEV True PC9_epitope_Rep1 1003.5008316873099 1003.49972993586 46.006 2 0.09376804431781618 0.0024634241595818188 0.010904806102733991 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 21328 18279 ERFEIPIKV True PC9_epitope_Rep5 1129.6495445263297 1129.64788490379 75.323 3 0.09376802350743818 0.0024634241595818188 0.010904811175824043 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 103979 20056 SQAPFIVAL True PC9_epitope_Rep6 944.5331177917599 944.53202993586 89.812 2 0.09376530901486353 0.0024634241595818188 0.010905472925711321 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 115244 4199 TREEGAQTL True PC9_epitope_Rep5 1003.4934378077497 1003.49234993586 21.223 2 0.0937533788688928 0.0024634241595818188 0.010908381756909903 ['ENSG00000169871|ENST00000306085|TRIM56'] 14083 19291 DRSQSWIL True PC9_epitope_Rep5 1003.5086939490699 1003.50758993586 79.246 2 0.09375247816543575 0.0024634241595818188 0.010908601398089511 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 31944 16388 GENPLQVLV True H1975_Epitope_Rep1 967.5338460677499 967.53329496793 68.395 1 0.09374951545643226 0.0024634241595818188 0.010909323899589976 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 114567 20031 TQDAVPLTL True PC9_epitope_Rep5 956.51786165044 956.51731496793 82.101 1 0.09374773497455152 0.0024634241595818188 0.010909758118957119 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 73212 17721 MRYVASYLLA True PC9_epitope_Rep6 1185.6216155263298 1185.6205099358601 80.798 2 0.09373955174916346 0.0024634241595818188 0.010911754034211749 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 49012 11306 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 51.579 2 0.09373835359003262 0.0024634241595818188 0.01091204629823067 ['ENSG00000197747|ENST00000368811|S100A10'] 58315 6432 LEMESGASA True H1975_Epitope_Rep3 893.3800478482899 893.3794949679301 29.717 1 0.09373648414246745 0.0024634241595818188 0.010912502322846523 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 14952 13461 DYFEEYGK True PC9_epitope_Rep2 1049.4341915961297 1049.4330899358602 57.056 2 0.09372674331613388 0.0024634241595818188 0.010914878749112386 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 37597 10874 GVVPTIQKV True PC9_epitope_Rep6 939.5753169569098 939.57420993586 52.689 2 0.0937261776142155 0.0024634241595818188 0.010915016776009763 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 105038 11855 SRDPHTEFTL True PC9_epitope_Rep3 1201.57275075761 1201.57111490379 50.619 3 0.09372102485804773 0.0024634241595818188 0.010916274085050947 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 115847 10449 TSDVGGYYY True H1975_Epitope_Rep3 1023.4185415319901 1023.41797496793 45.252 1 0.09371697224753364 0.0024634241595818188 0.010917263047418921 ['ENSG00000131711|ENST00000296755|MAP1B'] 13275 19363 DLTDYLMK True PC9_epitope_Rep4 997.47903361357 997.47792993586 82.59 2 0.09371560622623971 0.0024634241595818188 0.01091759641806564 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 35787 14183 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 62.459 2 0.09371324098850227 0.0024634241595818188 0.01091817366534565 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 108356 19387 SYLDSVHFF True PC9_epitope_Rep6 1113.51311062317 1113.51200993586 87.223 2 0.09371082695484093 0.0024634241595818188 0.010918762851398277 ['ENSG00000100393|ENST00000263253|EP300'] 117333 4739 TVNTSLVGK True NCI_RA007_Epitope_Rep5 917.5181960036099 917.51708993586 24.912 2 0.0937072548388065 0.0024634241595818188 0.010919634742608932 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000422788.5_1_3:56595403-56599181:+|nuORF', 'ENST00000469966.1_1_3:56592935-56598176:+|nuORF', 'ENST00000472582.5_1_3:56591255-56599181:+|nuORF', 'nc|ENSG00000180376|A2RUB6-4|CCDC66', 'nc|ENSG00000180376|A2RUB6-2|CCDC66'] 92846 20359 RPDSFVLIL True PC9_epitope_Rep4 1058.61243074162 1058.61132993586 86.453 2 0.09369631257593332 0.0024634241595818188 0.010922305969761875 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 41412 16713 HYGLPVVV True PC9_epitope_Rep4 882.49633836022 882.49578496793 72.256 1 0.09369369359766037 0.0024634241595818188 0.01092294540727241 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 65907 8030 LSDPQVHTV True PC9_epitope_Rep5 994.5083595959 994.50726993586 35.826 2 0.0936930599244346 0.0024634241595818188 0.010923100127312962 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 48942 9104 KEEELQAARAL True PC9_epitope_Rep5 1256.67246479888 1256.6713699358602 39.965 2 0.09368706632890696 0.0024634241595818188 0.01092456364914768 ['ENSG00000141519|ENST00000397545|CCDC40', 'CCDC40|p.M808Ffs*10|1|0.08|ENSG00000141519|chr17:80086187-80086188|-/CTTCC|frameshift_variant', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'nc|ENSG00000141519|Q4G0X9-4|CCDC40', 'nc|ENSG00000141519|Q4G0X9-5|CCDC40'] 104966 9084 SRDGM[Oxidation]NIVL True PC9_epitope_Rep4 1019.5069800773499 1019.50588993586 42.529 2 0.09368192730910037 0.0024634241595818188 0.010925818648214512 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 35004 7224 GQTGVIRSV True PC9_epitope_Rep5 915.5137793295099 915.51268993586 32.751 2 0.09367888439211546 0.0024634241595818188 0.010926561822963872 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 103692 6452 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 29.843 2 0.09367436877471325 0.0024634241595818188 0.010927664765367377 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 95741 15765 RYGSDFYSM True PC9_epitope_Rep5 1124.45969515132 1124.4585899358601 65.634 2 0.09367401117871506 0.0024634241595818188 0.010927752112935346 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 124857 15010 VHLDSAVAL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 62.739 2 0.09367219875801286 0.0024634241595818188 0.010928194830943783 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 8901 15473 AVFPSIVGR True PC9_epitope_Rep4 944.5443511817999 944.54324993586 67.444 2 0.09367101798724095 0.0024634241595818188 0.010928483265686174 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 14964 13378 DYFEQYGK True PC9_epitope_Rep1 1048.4501760134401 1048.44906993586 56.318 2 0.09366755064340394 0.0024634241595818188 0.010929330298665925 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 60896 11888 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 53.503 2 0.09366535372260978 0.0024634241595818188 0.010929867013907349 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 35897 4347 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 23.331 2 0.09364774896361769 0.0024634241595818188 0.01093416882092211 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 141480 22993 YTIGEVPISFV True PC9_epitope_Rep5 1223.64379043955 1223.64268993586 93.434 2 0.09363897315750028 0.0024634241595818188 0.010936313831800687 ['ENSG00000000419|ENST00000371588|DPM1', 'ENST00000466152.5_1_20:49551671-49557490:-|nuORF'] 11865 16989 DHIHIIAL True PC9_epitope_Rep1 930.52870111766 930.52760993586 70.172 2 0.0936386908216729 0.0024634241595818188 0.010936382847872541 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 28205 14707 FREGESVTVL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 61.39 2 0.09363775979894678 0.0024634241595818188 0.010936610436272235 ['ENSG00000104881|ENST00000360957|PPP1R13L', 'PPP1R13L|p.S778C|1|0.29|ENSG00000104881|chr19:45382642-45382642|G/C|missense_variant'] 140783 7725 YSDKEFAGSY True H1975_Epitope_Rep1 1165.49276910141 1165.49166993586 34.676 2 0.09363376180638304 0.0024634241595818188 0.010937587796245951 ['ENSG00000109436|ENST00000442267|TBC1D9', 'TBC1D9|p.G735Efs*4|1|0.16|ENSG00000109436|chr4:140657530-140657530|C/-|frameshift_variant', 'ENST00000514787.1_1_4:141591792-141598206:-|nuORF'] 49293 2740 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 14.59 2 0.09362798426247598 0.0024634241595818188 0.010939000336703537 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 87436 14071 QPYMPTVSA True PC9_epitope_Rep6 992.4637179025999 992.4631649679301 65.995 1 0.09362666196495668 0.0024634241595818188 0.010939323647018039 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 107169 22102 SVIIPGMTL True PC9_epitope_Rep1 929.52558988317 929.52448993586 89.827 2 0.09362337868348833 0.0024634241595818188 0.010940126469873197 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 33475 14222 GLATDVQTV True PC9_epitope_Rep3 902.47091145802 902.46980993586 59.79 2 0.09361937295188347 0.0024634241595818188 0.01094110602090684 ['ENSG00000277791|ENST00000619426|PSMB3'] 88001 12049 QRNPQGFVL True PC9_epitope_Rep4 1057.5668775315298 1057.56578993586 54.152 2 0.09361299793281068 0.0024634241595818188 0.010942665123060975 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 111198 13799 THISDTSVVL True PC9_epitope_Rep1 1070.56078909158 1070.5596899358602 57.923 2 0.09360122777510975 0.0024634241595818188 0.010945544238156921 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 115227 4445 TRDYSQPTAA True PC9_epitope_Rep5 1108.51490152832 1108.51380993586 22.167 2 0.09359427046271597 0.0024634241595818188 0.010947246414665655 ['ENSG00000078081|ENST00000265598|LAMP3'] 64295 13467 LPKEPQGIIA True PC9_epitope_Rep1 1064.62299542532 1064.62188993586 56.658 2 0.09359259683340966 0.0024634241595818188 0.010947655922441757 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000474216.5_1_1:11137420-11140866:-|nuORF'] 14152 12280 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 52.318 2 0.09359006723114673 0.0024634241595818188 0.010948274899426244 ['ENSG00000149823|ENST00000279281|VPS51'] 47225 19189 IVAPGTFEV True PC9_epitope_Rep4 931.5014833103099 931.5009349679301 81.91 1 0.09358973090769607 0.0024634241595818188 0.010948357198059547 ['ENSG00000143621|ENST00000361891|ILF2'] 72835 9304 MPNGDHIVSA True PC9_epitope_Rep3 1039.47567956863 1039.4745899358602 40.729 2 0.093582411439335 0.0024634241595818188 0.010950148423742267 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 6289 4793 APRGPGTVPA True PC9_epitope_Rep5 921.5032146458099 921.50210993586 23.481 2 0.09357925001061083 0.0024634241595818188 0.010950922176990336 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 111265 17631 THLGPLASL True PC9_epitope_Rep3 907.51271670035 907.51160993586 73.009 2 0.09357912067211234 0.0024634241595818188 0.010950953833430541 ['ENSG00000127399|ENST00000359623|LRRC61'] 96852 5255 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 26.912 2 0.0935681859924009 0.0024634241595818188 0.010953630481897784 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 127530 11888 VNQIGSVTESL True H1975_Epitope_Rep3 1145.59281749585 1145.59172993586 50.877 2 0.09354992522344084 0.0024634241595818188 0.010958101834628163 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 4310 22239 AIIGGMFTV True PC9_epitope_Rep5 907.48372507119 907.48317496793 90.549 1 0.09354950588678394 0.0024634241595818188 0.010958204534242455 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 60795 19172 LHSLPIVSM True PC9_epitope_Rep1 995.54738795691 995.54628993586 78.539 2 0.09354864289019671 0.0024634241595818188 0.010958415893353626 ['ENSG00000125484|ENST00000372146|GTF3C4'] 1964 8864 AEIPEEHIP True H1975_Epitope_Rep2 1033.50802524273 1033.5069299358602 39.064 2 0.09354769035992246 0.0024634241595818188 0.010958649184927477 ['ENSG00000198218|ENST00000395443|QRICH1'] 47578 14380 IVVGRITEV True PC9_epitope_Rep5 984.5967806774798 984.59568993586 60.313 2 0.09354554671681885 0.0024634241595818188 0.01095917421843373 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 41420 9240 HYGQSGISM True PC9_epitope_Rep3 978.4229157197799 978.42180993586 40.485 2 0.09354334882849663 0.0024634241595818188 0.010959712562802657 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 87726 13521 QRALLANAL True PC9_epitope_Rep2 968.5767139392399 968.57560993586 57.299 2 0.0935399006543571 0.0024634241595818188 0.010960557199160326 ['ENSG00000109133|ENST00000504986|TMEM33'] 136803 11206 YAAAETYL True H1975_Epitope_Rep2 900.4228986364399 900.42235496793 48.144 1 0.09353277427192268 0.0024634241595818188 0.01096230301510089 ['nc|ENSG00000105643|Q8TBH0-2|ARRDC2'] 110356 7879 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 35.258 1 0.09352995531863184 0.0024634241595818188 0.01096299367311579 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 37943 9552 HAAEALLL True NCI_RA007_Epitope_Rep3 836.47560291564 836.4745099358599 44.659 2 0.09352231571914954 0.0024634241595818188 0.0109648656219732 ['ENST00000507994.1_1_4:100738070-100784201:+|nuORF', 'nc|ENSG00000070190|Q9UN19-2|DAPP1', 'ENSG00000070190|ENST00000512369|DAPP1'] 40261 14726 HQLEIFDAL True NCI_RA007_Epitope_Rep3 1084.5553097883198 1084.5542099358602 65.33 2 0.09351450722496844 0.0024634241595818188 0.010966779269251102 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 104671 14680 SQTLVSQGL True PC9_epitope_Rep5 931.4974605590301 931.49636993586 61.471 2 0.09349492452196312 0.0024634241595818188 0.01097157984696821 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 48909 15502 KEDPFVFIP True H1975_Epitope_Rep2 1090.5698972233 1090.5688099358601 64.785 2 0.09349185866997133 0.0024634241595818188 0.010972331602182497 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 75043 9720 NHSLVTSDL True PC9_epitope_Rep4 984.4876241513201 984.48652993586 45.025 2 0.09349011303437757 0.0024634241595818188 0.010972759658618533 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant'] 17407 13435 EHDPSSIYL True PC9_epitope_Rep2 1059.48728979815 1059.48618993586 56.96 2 0.09348801376217913 0.0024634241595818188 0.010973274453144024 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'HEATR5B|p.G877Wfs*15|1|0.44|ENSG00000008869|chr2:37049720-37049721|-/A|frameshift_variant', 'HEATR5B|p.R763C|1|0.1|ENSG00000008869|chr2:37056552-37056552|G/A|missense_variant', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 49938 18630 KILPTLEAV True PC9_epitope_Rep1 982.60628273202 982.60518993586 76.448 2 0.09348618146140161 0.0024634241595818188 0.010973723798289101 ['ENSG00000143621|ENST00000361891|ILF2'] 8635 5676 AVADAVIEK True NCI_RA007_Epitope_Rep4 914.50729696674 914.50618993586 28.438 2 0.093480546036688 0.0024634241595818188 0.01097510591386727 ['ENST00000369426.9_1_1:119575536-119588262:-|nuORF', 'ENSG00000116874|ENST00000235521|WARS2'] 17237 14086 EHAEALLL True PC9_epitope_Rep4 894.4810822188999 894.47998993586 62.091 2 0.09347528025540089 0.0024634241595818188 0.010976397522009775 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 30214 19841 FYSNIQTVI True PC9_epitope_Rep4 1083.5600608155898 1083.5589699358602 84.449 2 0.0934710673864185 0.0024634241595818188 0.010977430972321003 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 87728 12785 QRALLANAL True PC9_epitope_Rep4 968.5767139392399 968.57560993586 57.039 2 0.09345834060132681 0.0024634241595818188 0.010980553515394715 ['ENSG00000109133|ENST00000504986|TMEM33'] 87803 18401 QRDSLLWKL True PC9_epitope_Rep5 1157.6556925359298 1157.65405490379 75.798 3 0.09345241059544937 0.0024634241595818188 0.010982008742724371 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 3968 8169 AHDSSEYAI True PC9_epitope_Rep5 991.42468954159 991.42358993586 36.363 2 0.09344655428060614 0.0024634241595818188 0.010983446066003526 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 111050 14990 THDGSILIV True PC9_epitope_Rep2 953.51819600361 953.5176449679301 62.915 1 0.09344098796763586 0.0024634241595818188 0.01098481237935108 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 107474 18764 SVMGNIIHV True PC9_epitope_Rep5 968.51133680136 968.51022993586 77.186 2 0.09343570217626947 0.0024634241595818188 0.010986109984989546 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 86254 18576 QIPQVLNQV True PC9_epitope_Rep4 1037.58694426977 1037.58584993586 79.529 2 0.09343302679802011 0.0024634241595818188 0.010986766817425248 ['ENSG00000205339|ENST00000379719|IPO7'] 61378 6392 LITEDVQGK True PC9_epitope_Rep4 1001.5393253710098 1001.53822993586 31.677 2 0.09343224571990613 0.0024634241595818188 0.010986958587041134 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 96382 12686 RYVPRASYF True PC9_epitope_Rep1 1157.5981776598098 1157.59654490379 53.668 3 0.0934271647407816 0.0024634241595818188 0.010988206142203518 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 105705 13041 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.4579299358602 55.248 2 0.09342701040890503 0.0024634241595818188 0.010988244038093639 ['ENSG00000115758|ENST00000234111|ODC1'] 90830 9715 RETETVFVP True NCI_RA007_Epitope_Rep1 1076.5502244078798 1076.54912993586 41.789 2 0.09340441632341388 0.0024634241595818188 0.01099379331107642 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 104098 20225 SQDYPTLAF True PC9_epitope_Rep4 1040.48147614172 1040.48097496793 85.935 1 0.09339545309115854 0.0024634241595818188 0.010995995483930798 ['ENSG00000134697|ENST00000373062|GNL2'] 88010 16855 QRPAVIGDVL True PC9_epitope_Rep1 1066.61349337078 1066.6123899358602 69.657 2 0.093392175668926 0.0024634241595818188 0.010996800817052822 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 73229 14310 MSDSYLPSYY True H1975_Epitope_Rep1 1224.5008912569601 1224.50037496793 60.23 1 0.09338930176390825 0.0024634241595818188 0.010997507043414692 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 27646 20385 FPFAPPAAA True PC9_epitope_Rep1 887.4541391950698 887.45359496793 83.234 1 0.09338752690166649 0.0024634241595818188 0.010997943215219316 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 64231 15681 LPGVDALSNI True H1975_Epitope_Rep1 997.5444107514501 997.5438649679301 65.605 1 0.09338716659718418 0.0024634241595818188 0.010998031761931988 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 105710 13334 SSEQTFMYY True H1975_Epitope_Rep2 1154.4590264449798 1154.4579299358602 56.421 2 0.09338288313470652 0.0024634241595818188 0.010999084497133185 ['ENSG00000115758|ENST00000234111|ODC1'] 64804 4917 LQDAEIAR True NCI_RA007_Epitope_Rep1 914.4821448480599 914.48104993586 23.207 2 0.09337966120702725 0.0024634241595818188 0.010999876404811204 ['ENSG00000197956|ENST00000368719|S100A6'] 105237 7350 SRISSSSF True PC9_epitope_Rep5 869.4242956187701 869.42318993586 33.231 2 0.0933760222982136 0.0024634241595818188 0.011000770866113244 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 142431 12855 YYFEGIKQTF True NCI_RA007_Epitope_Rep3 1294.6233893481397 1294.6222899358602 57.824 2 0.093375307933942 0.0024634241595818188 0.011000946468401121 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 48126 21983 IYPDSFTVL True PC9_epitope_Rep3 1053.53826274185 1053.5371699358602 89.858 2 0.0933637207002364 0.0024634241595818188 0.011003795169618533 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 133729 17703 VYDPSLKTLL True PC9_epitope_Rep6 1147.64887581999 1147.6477699358602 80.73 2 0.09335500739781194 0.0024634241595818188 0.011005937781315308 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 47374 8643 IVIETGPLK True NCI_RA007_Epitope_Rep3 968.5906326678798 968.58952993586 41.075 2 0.09335448920392658 0.0024634241595818188 0.01100606521830588 ['ENSG00000151657|ENST00000379562|KIN'] 40646 9764 HRNGGLITL True PC9_epitope_Rep2 979.55631284783 979.55520993586 42.896 2 0.09335335657409276 0.0024634241595818188 0.011006343765525025 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 43815 8441 IHSEPLGV True PC9_epitope_Rep4 850.45486747106 850.45376993586 39.934 2 0.09335331193254914 0.0024634241595818188 0.011006354744339805 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 40962 7275 HTDGNNIYV True PC9_epitope_Rep2 1031.4672230599099 1031.4661299358602 33.371 2 0.093351947310478 0.0024634241595818188 0.011006690354531135 ['ZNF800|p.I552*|1|0.23|ENSG00000048405|chr7:127373686-127373686|C/-|frameshift_variant', 'ENSG00000048405|ENST00000265827|ZNF800'] 48350 8744 IYSTKLYRF True NCI_RA007_Epitope_Rep3 1189.6495445263297 1189.64788490379 41.483 3 0.09333982940120297 0.0024634241595818188 0.011009671015463391 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 45325 20531 IQALISGIEA True PC9_epitope_Rep1 1013.57571087973 1013.57517496793 83.784 1 0.09333862245286434 0.0024634241595818188 0.011009967932392185 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 99249 19280 SHNPLANIL True PC9_epitope_Rep5 977.52942939365 977.52832993586 79.205 2 0.09331707868002548 0.0024634241595818188 0.01101526911636422 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 34022 13331 GLVDEKALAQA True PC9_epitope_Rep2 1113.60298825673 1113.60188993586 56.55 2 0.09331669665902277 0.0024634241595818188 0.011015363140506742 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF', 'ENST00000511907.1_1_4:1208072-1210006:-|nuORF', 'ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 97281 9052 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39686496793 39.804 1 0.09331165175212 0.0024634241595818188 0.011016604879455664 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 28264 17831 FRMPVLREY True PC9_epitope_Rep5 1209.6328489163698 1209.6312149037901 73.606 3 0.09331091260400873 0.0024634241595818188 0.011016786822421491 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2', 'ENST00000603865.1_1_11:75507249-75507624:+|nuORF', 'ENST00000603363.5_1_11:75507249-75511550:+|nuORF'] 97864 11638 SELPTTVTV True H1975_Epitope_Rep3 945.50187723313 945.50132496793 49.901 1 0.09330326084762279 0.0024634241595818188 0.01101867048710738 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 118375 6243 TYNQKHSLF True NCI_RA007_Epitope_Rep4 1136.5614577979202 1136.56036993586 30.619 2 0.09329009204317573 0.0024634241595818188 0.011021913022636025 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 6723 15149 AQAPGVITGV True PC9_epitope_Rep1 911.5076313199099 911.50652993586 63.092 2 0.09327461108535728 0.0024634241595818188 0.011025726035106187 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 93106 8703 RPNPPPVSV True PC9_epitope_Rep5 961.53451477409 961.53340993586 38.418 2 0.09327231772059577 0.0024634241595818188 0.011026291005154367 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 103620 11327 SPTGGFVDA True PC9_epitope_Rep4 849.3868474808899 849.3862949679301 51.348 1 0.09327065514628675 0.0024634241595818188 0.011026700597262995 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 27786 19318 FQAEIAQLM True PC9_epitope_Rep6 1049.52156713189 1049.52046993586 86.955 2 0.09326836452933601 0.0024634241595818188 0.011027264937737712 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 6336 5600 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 26.367 2 0.09326491391334286 0.0024634241595818188 0.011028115119552479 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 71358 17381 LYRLKFNEF True PC9_epitope_Rep2 1228.6604435632 1228.65880490379 72.116 3 0.093262730422705 0.0024634241595818188 0.011028653132183869 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 39968 10231 HPLLGVSA True PC9_epitope_Rep2 792.4493881678001 792.4488349679301 44.689 1 0.09325910910690047 0.0024634241595818188 0.011029545480240143 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 2895 10199 AEVVDEIAA True H1975_Epitope_Rep2 915.4549270407098 915.4543749679301 44.235 1 0.09325114030690489 0.0024634241595818188 0.011031509356891055 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 93024 7049 RPLEPQPAP True PC9_epitope_Rep3 1003.5450794577899 1003.5439899358599 32.123 2 0.09324114234571354 0.0024634241595818188 0.011033973781297812 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 108750 13846 SYSHIMALI True NCI_RA007_Epitope_Rep4 1033.52665251233 1033.52554993586 60.516 2 0.09324029986784532 0.0024634241595818188 0.011034181469820334 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 34885 16134 GQLPNLQTV True PC9_epitope_Rep6 968.5290950404801 968.52798993586 74.403 2 0.09322818130319847 0.0024634241595818188 0.011037169361796337 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 28095 18819 FQVQGVQNL True PC9_epitope_Rep2 1031.5399940773498 1031.5388899358602 77.758 2 0.09322243476912279 0.0024634241595818188 0.011038586466683962 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 30445 6758 GAFGKPSSL True H1975_Epitope_Rep2 862.45486747106 862.45376993586 30.909 2 0.09322169929527176 0.0024634241595818188 0.011038767848233325 ['ENSG00000099812|ENST00000215582|MISP'] 23824 18063 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.6640899358601 74.781 2 0.09321099226725026 0.0024634241595818188 0.011041408721279533 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 17375 17695 EHDLLQAAL True PC9_epitope_Rep2 1008.5240096600398 1008.52290993586 73.344 2 0.0932090099101027 0.0024634241595818188 0.011041897732631941 ['ENSG00000135686|ENST00000564996|KLHL36', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 25546 20354 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54732993586 84.35 2 0.09320088432302803 0.0024634241595818188 0.011043902381685613 ['ENSG00000125356|ENST00000371437|NDUFA1'] 107079 15961 SVHGDFLNV True PC9_epitope_Rep3 986.48214484806 986.48104993586 66.54 2 0.09318956246672021 0.0024634241595818188 0.011046696152848296 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 78406 16391 NYLNHWNHF True PC9_epitope_Rep1 1243.55229009655 1243.55065490379 67.87 3 0.09318667404369438 0.0024634241595818188 0.011047409004973741 ['ENSG00000167363|ENST00000300784|FN3K'] 22270 8368 ETDAQSITY True H1975_Epitope_Rep3 1026.4505699362599 1026.4499749679298 37.17 1 0.0931834056831597 0.0024634241595818188 0.011048215676948714 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 111488 18224 THYDHVLIEL True PC9_epitope_Rep1 1238.6295373577398 1238.62844993586 74.89 2 0.09317373992262887 0.0024634241595818188 0.011050601634007076 ['ENSG00000076003|ENST00000264156|MCM6'] 134484 13291 VYPSSLSKI True PC9_epitope_Rep3 992.5542471591599 992.55314993586 56.158 2 0.09317153842186791 0.0024634241595818188 0.011051145134692113 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 124746 10727 VHAQIVSTL True PC9_epitope_Rep4 966.5498304850599 966.54872993586 49.016 2 0.09316981501488641 0.0024634241595818188 0.011051570622561943 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 89407 12548 QYAPSTAQF True PC9_epitope_Rep6 1011.4661604307499 1011.46506993586 59.702 2 0.09315267088311444 0.0024634241595818188 0.011055804143796562 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 39852 7505 HPADSVVSV True PC9_epitope_Rep2 909.4555957470501 909.45448993586 34.237 2 0.09314760174707307 0.0024634241595818188 0.011057056196206907 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 108579 22051 SYNVTSVLF True PC9_epitope_Rep1 1028.51786165044 1028.51676993586 89.633 2 0.09314311595167159 0.0024634241595818188 0.011058164278548496 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2'] 116227 12693 TTDDPALLY True H1975_Epitope_Rep2 1007.4811417885498 1007.48057496793 53.926 1 0.0931430922746325 0.0024634241595818188 0.011058170127536559 ['ENSG00000182749|ENST00000675840|PAQR7'] 6824 8731 AQFDADELR True NCI_RA007_Epitope_Rep1 1063.4934378077498 1063.4923499358601 37.963 2 0.09314083865187649 0.0024634241595818188 0.011058726858084577 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 121802 15978 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 66.712 2 0.09313893981495706 0.0024634241595818188 0.011059195963693803 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 71847 15054 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51487496793 63.156 1 0.09313763400721166 0.0024634241595818188 0.011059518573050833 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 29676 18491 FVLGHFILL True H1975_Epitope_Rep3 1057.63243791021 1057.63134993586 77.537 2 0.09313557142443772 0.0024634241595818188 0.011060028167419725 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 129196 9575 VQSNRILGV True PC9_epitope_Rep6 984.5716285587998 984.57052993586 47.13 2 0.0931354530578552 0.0024634241595818188 0.011060057412471073 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 109011 18489 TAIAGLTFL True H1975_Epitope_Rep2 905.52221875489 905.52167496793 76.721 1 0.093130810474957 0.0024634241595818188 0.01106120452196811 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 126302 20878 VLIENVASL True PC9_epitope_Rep1 956.5542471591599 956.55369496793 85.127 1 0.09313012845176273 0.0024634241595818188 0.011061373048730288 ['ENSG00000176153|ENST00000389614|GPX2'] 35571 5983 GSYSLEEPK True NCI_RA007_Epitope_Rep4 1008.4763907612798 1008.47528993586 29.634 2 0.09312562430999206 0.0024634241595818188 0.011062486075657654 ['ENSG00000115884|ENST00000254351|SDC1'] 107810 11670 SVTSHIYQV True PC9_epitope_Rep1 1032.5240096600398 1032.52290993586 49.765 2 0.09311620748659194 0.0024634241595818188 0.011064813428142767 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 18138 11569 EIIRQLNGV True PC9_epitope_Rep6 1040.59784330664 1040.59674993586 55.609 2 0.09311411665186406 0.0024634241595818188 0.011065330237589646 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 32250 14636 GEYYNVPIP True H1975_Epitope_Rep2 1050.5022115862998 1050.50110993586 61.456 2 0.09311329149485366 0.0024634241595818188 0.011065534204990924 ['ENST00000284384.6_1_17:64637544-64770230:+|nuORF', 'ENSG00000154229|ENST00000413366|PRKCA'] 13970 7016 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 32.39 2 0.0931121935059904 0.0024634241595818188 0.011065805618188497 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 108175 20486 SYGDILHVI True PC9_epitope_Rep2 1015.53384606775 1015.5332749679301 84.229 1 0.09311215067470724 0.0024634241595818188 0.011065816205833365 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 39076 17690 HHSSVIFIF True PC9_epitope_Rep6 1085.56581490237 1085.56470993586 80.679 2 0.09310491825466141 0.0024634241595818188 0.011067604156081516 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 88202 14851 QRYPGQVIL True PC9_epitope_Rep1 1072.6029286870798 1072.60182993586 61.943 2 0.09310384686290998 0.0024634241595818188 0.01106786904167042 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 36105 23018 GVAGTDIFLVV True PC9_epitope_Rep2 1089.60701100801 1089.6059099358602 94.032 2 0.09310286768665815 0.0024634241595818188 0.011068111133620509 ['ENST00000481918.1_1_1:213186656-213188829:-|nuORF'] 137398 8323 YEAADKWVA True H1975_Epitope_Rep3 1051.4974605590298 1051.49636993586 36.997 2 0.09309966168661167 0.0024634241595818188 0.011068903821607386 ['ENST00000496594.5_1_9:130883426-130884979:-|nuORF', 'ENSG00000148334|ENST00000338961|PTGES2'] 100092 20836 SISDVIAQV True PC9_epitope_Rep5 930.5022115863 930.50110993586 85.194 2 0.0930950704645596 0.0024634241595818188 0.011070039101538613 ['ENSG00000154122|ENST00000284268|ANKH'] 104947 15124 SRDEYYHLL True PC9_epitope_Rep3 1194.56693710118 1194.56530490379 63.312 3 0.09308935870897625 0.0024634241595818188 0.011071451612181269 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 132059 6669 VTTGGMVLK True NCI_RA007_Epitope_Rep1 904.5051887917599 904.50408993586 29.952 2 0.09308814680082243 0.0024634241595818188 0.011071751337691314 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 35525 7595 GSSAINILK True NCI_RA007_Epitope_Rep3 901.5232813840499 901.52218993586 37.007 2 0.09308621072112337 0.0024634241595818188 0.011072230179132876 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 111484 11659 THVSDTSVVL True PC9_epitope_Rep1 1056.54513902744 1056.5440499358601 49.724 2 0.0930810976382717 0.0024634241595818188 0.011073494868284154 ['ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 2253 5813 AENPKLISA True H1975_Epitope_Rep3 941.5181960036099 941.51708993586 27.382 2 0.09307699717596082 0.0024634241595818188 0.011074509191158528 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 121472 9727 VEYEVPEAA True H1975_Epitope_Rep1 1005.4654917244097 1005.4649749679301 42.342 1 0.09306536491178766 0.0024634241595818188 0.011077387120367758 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 103687 5500 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 26.549 2 0.09305727185787664 0.0024634241595818188 0.011079389835241602 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 117653 13129 TVTNAVVTV True PC9_epitope_Rep4 902.50729696674 902.50618993586 58.395 2 0.09305547689699104 0.0024634241595818188 0.011079834064556666 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 74148 8830 NEDLRSWTA True H1975_Epitope_Rep1 1090.50433684462 1090.50377496793 38.887 1 0.0930494378534605 0.0024634241595818188 0.011081328772912413 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 114840 19387 TQNDIISTL True PC9_epitope_Rep2 1003.51858992643 1003.51748993586 79.95 2 0.09302855936846875 0.0024634241595818188 0.011086497828982907 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 14080 5723 DRSKSYEL True PC9_epitope_Rep3 996.4876241513199 996.48652993586 27.086 2 0.09301882232494003 0.0024634241595818188 0.011088909290588847 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1'] 106940 13700 SVDSQILYY True H1975_Epitope_Rep3 1086.5233409537 1086.5222499358601 57.991 2 0.09301293289314067 0.0024634241595818188 0.01109036810012349 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 75377 18757 NITDKGIIAL True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 76.937 2 0.09301047757945963 0.0024634241595818188 0.011090976333999643 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 90437 8419 REIQEAIAV True H1975_Epitope_Rep2 1027.5662088251897 1027.5651099358602 37.335 2 0.09300977814689462 0.0024634241595818188 0.011091149604247492 ['ENSG00000198218|ENST00000395443|QRICH1'] 118574 16839 TYQVLAVTF True NCI_RA007_Epitope_Rep4 1040.5542471591598 1040.5531499358601 72.966 2 0.09300141415453601 0.0024634241595818188 0.011093221813028156 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 35782 15770 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.5172549679301 65.818 1 0.09299803138082942 0.0024634241595818188 0.01109406001160151 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 118222 19932 TYLDIPLVI True NCI_RA007_Epitope_Rep3 1045.60594837885 1045.60484993586 86.87 2 0.09299760354409967 0.0024634241595818188 0.011094166027154538 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 101272 23827 SLIDIVTEI True PC9_epitope_Rep1 1001.56447748969 1001.56338993586 96.45 2 0.09298258851032841 0.0024634241595818188 0.01109788727793812 ['ENSG00000068745|ENST00000328631|IP6K2'] 133663 19847 VYAPPVGGF True PC9_epitope_Rep1 905.4647038787698 905.46360993586 81.158 2 0.09298133586098578 0.0024634241595818188 0.01109819778182603 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 26401 14886 FHYEADGANVL True PC9_epitope_Rep4 1234.5618517207397 1234.56074993586 65.196 2 0.09298054162894885 0.0024634241595818188 0.011098394658540671 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 108898 8971 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.53816993586 39.502 2 0.09297973272681048 0.0024634241595818188 0.01109859517513384 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 38947 7540 HHIGDRSLSL True PC9_epitope_Rep4 1133.59415490853 1133.5924949037899 36.372 3 0.09297772982486913 0.0024634241595818188 0.011099091683953986 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 2672 7432 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.42212993586 33.532 2 0.09297151148859628 0.0024634241595818188 0.011100633311060553 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 79262 8587 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 38.39 2 0.09296545317035039 0.0024634241595818188 0.011102135462583866 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 71397 20978 LYSPLAEQF True PC9_epitope_Rep2 1066.5335117145798 1066.5324099358602 86.143 2 0.09296533246082252 0.0024634241595818188 0.01110216539430291 ['ENSG00000103148|ENST00000611875|NPRL3'] 75116 10663 NHVTPPNVSL True PC9_epitope_Rep6 1076.56145779792 1076.56036993586 51.833 2 0.09296111625984695 0.0024634241595818188 0.011103210911983194 ['ENSG00000171223|ENST00000302754|JUNB'] 32142 6078 GEVDDGARKLV True H1975_Epitope_Rep1 1157.60405088589 1157.6023949037901 28.446 3 0.09296062066696764 0.0024634241595818188 0.011103333813382807 ['ENSG00000164024|ENST00000296411|METAP1'] 20045 13808 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 58.26 2 0.0929512359403835 0.0024634241595818188 0.011105661362671155 ['ENSG00000182195|ENST00000370526|LDOC1'] 96613 5624 SAHAGTYEV True PC9_epitope_Rep3 933.4192102383299 933.41810993586 26.711 2 0.09294931281024484 0.0024634241595818188 0.011106138384219836 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 104178 20858 SQFPGAITL True PC9_epitope_Rep2 932.4967322830399 932.49618496793 85.675 1 0.09294366788979296 0.0024634241595818188 0.011107538687138997 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 26798 21557 FLADPSAFVAA True PC9_epitope_Rep3 1107.5600608155898 1107.5589699358602 88.213 2 0.09294362553509516 0.0024634241595818188 0.011107549194458522 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 127895 17471 VPGLAILL True H1975_Epitope_Rep2 794.52657585934 794.5260249679301 72.495 1 0.09293140992864883 0.0024634241595818188 0.011110580026158869 ['ENSG00000178718|ENST00000322177|RPP25'] 7379 9598 ARSPTNSLL True PC9_epitope_Rep5 957.52434401321 957.52324993586 41.881 2 0.09292882014569412 0.0024634241595818188 0.011111222681791464 ['ENSG00000183864|ENST00000327492|TOB2', 'nc|ENSG00000183864|Q14106-2|TOB2'] 96975 11939 SAYEFYHAL True NCI_RA007_Epitope_Rep4 1099.49746055903 1099.49636993586 52.924 2 0.09292754671556996 0.0024634241595818188 0.011111538696906252 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 99886 16780 SILSNIHEV True PC9_epitope_Rep1 1010.53965972418 1010.53856993586 69.369 2 0.0929270832130178 0.0024634241595818188 0.011111653722070534 ['ENSG00000165029|ENST00000374736|ABCA1'] 21136 6710 ERAPGETAL True PC9_epitope_Rep5 942.4770594676199 942.47596993586 30.782 2 0.0929176685364439 0.0024634241595818188 0.011113990361040658 ['ENSG00000092148|ENST00000399332|HECTD1'] 2525 8786 AEQPSELVSA True H1975_Epitope_Rep3 1029.4978544818498 1029.49727496793 38.801 1 0.09291563574058903 0.0024634241595818188 0.011114494944114076 ['ENSG00000183155|ENST00000367262|RABIF'] 26446 18561 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.46017496793 76.615 1 0.0929146233224161 0.0024634241595818188 0.011114746255903645 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 114769 5602 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.54912993586 28.236 2 0.09289974452472917 0.002491295473646296 0.011118440230707178 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 3943 12459 AHDGGIYAL True PC9_epitope_Rep1 915.44503106335 915.44392993586 52.789 2 0.09289609483627129 0.002491295473646296 0.011119346520691478 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 32212 8626 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 38.136 1 0.09288846830520034 0.002491295473646296 0.011121240565900373 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 35943 4085 GTSSVIVSR True NCI_RA007_Epitope_Rep5 904.4977949122 904.49668993586 22.165 2 0.09287776400375196 0.002491295473646296 0.011123899490446848 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 23204 8906 EVLSKVQQV True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 39.615 2 0.09287534659441818 0.002491295473646296 0.011124500053042954 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 114785 20893 TQLESSWEL True PC9_epitope_Rep1 1091.51350454599 1091.5124099358602 85.186 2 0.09287491028837071 0.002491295473646296 0.0111246084488429 ['ENSG00000092148|ENST00000399332|HECTD1'] 14030 15418 DRIKDEFQL True PC9_epitope_Rep5 1162.59823722946 1162.5965849037902 64.315 3 0.09286610642604495 0.002491295473646296 0.011126795893128847 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 107724 4026 SVSDPVEDK True NCI_RA007_Epitope_Rep4 974.4556553167 974.45454993586 21.745 2 0.09286304070447716 0.002491295473646296 0.011127557710910218 ['ENSG00000038219|ENST00000040738|BOD1L1'] 26226 9174 FHDPDSAVV True PC9_epitope_Rep4 985.4505103666099 985.44940993586 42.883 2 0.09285653327662778 0.002491295473646296 0.011129174941043554 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 140842 14452 YSDPSVLYM True H1975_Epitope_Rep2 1073.47394823313 1073.47284993586 60.745 2 0.09283023735768973 0.002491295473646296 0.011135712292241128 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Nfs*41|1|0.31|ENSG00000068024|chr2:239053574-239053593|GTGCGCTGCAGGCAGCGCCA/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 7222 9655 ARDDTHYLL True PC9_epitope_Rep2 1102.54072235334 1102.5396299358601 42.477 2 0.09282606859323622 0.002491295473646296 0.011136749011205264 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 40416 8813 HQVTLEESL True NCI_RA007_Epitope_Rep5 1054.5294889633 1054.52838993586 40.564 2 0.09282474744936167 0.002491295473646296 0.011137077582084877 ['ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 16739 8384 EESPVQYAA True H1975_Epitope_Rep3 992.4450906329998 992.44398993586 37.232 2 0.09282056330741319 0.002491295473646296 0.011138118246500182 ['ENSG00000143653|ENST00000366510|SCCPDH'] 43931 19803 IIDETMAQL True PC9_epitope_Rep5 1032.5161473982798 1032.5150499358601 81.22 2 0.09282051777588024 0.002491295473646296 0.011138129571443448 ['ENSG00000072501|ENST00000322213|SMC1A'] 12132 12604 DIDIRPGLY True H1975_Epitope_Rep3 1060.5553097883198 1060.5542099358602 53.686 2 0.09281507108812263 0.002491295473646296 0.011139484391201557 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B', 'ENST00000484312.1_1_3:179298984-179304429:+|nuORF'] 44980 12848 IPAPPLSKV True PC9_epitope_Rep2 920.56950330048 920.56840993586 54.72 2 0.0928130136802735 0.002491295473646296 0.011139996195552787 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.L27M|1|0.25|ENSG00000148346|chr9:128149604-128149604|C/A|missense_variant'] 89696 11851 RAAEPLLTL True NCI_RA007_Epitope_Rep4 982.58113061334 982.58002993586 52.565 2 0.09280521675473342 0.002491295473646296 0.011141935974872454 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF', 'nc|ENSG00000165525|O60524-5|NEMF'] 104035 4523 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 22.277 2 0.0928040217877342 0.002491295473646296 0.01114223329631814 ['ENSG00000130935|ENST00000253247|NOL11'] 3498 12330 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep3 1042.5658747883201 1042.56537496793 52.611 1 0.09280249349789518 0.002491295473646296 0.011142613563270268 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 97886 9529 SELSRTYLP True H1975_Epitope_Rep2 1064.55022440788 1064.54912993586 41.624 2 0.09280095679359256 0.002491295473646296 0.011142995936317677 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1', 'DAPK1-AGTPBP1|1|fusion'] 74240 7054 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4601949679301 32.06 1 0.09280091829844575 0.002491295473646296 0.011143005515097592 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 134758 19224 VYTSVVEEL True PC9_epitope_Rep4 1037.5280919809697 1037.52698993586 82.046 2 0.09280024893759481 0.002491295473646296 0.011143172073973442 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 111902 13994 TIPEAFRGV True PC9_epitope_Rep4 988.5341804209198 988.53308993586 61.736 2 0.09278258646678493 0.002491295473646296 0.011147567928430552 ['ENSG00000213719|ENST00000375784|CLIC1'] 4481 17964 AIVKEIVNI True PC9_epitope_Rep1 997.6171817688898 997.61608993586 73.892 2 0.09277814993395128 0.002491295473646296 0.011148672356038506 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 136833 12861 YADGESFL True H1975_Epitope_Rep2 900.3865131277199 900.38596496793 54.58 1 0.09277742794468859 0.002491295473646296 0.011148852097403066 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 60525 16043 LHDENILL True PC9_epitope_Rep5 965.51819600361 965.51708993586 66.698 2 0.09277698401438851 0.002491295473646296 0.011148962616531146 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'RPGRIP1L|p.R321Afs*8|1|0.43|ENSG00000103494|chr16:53672939-53672940|-/T|frameshift_variant'] 14047 13305 DRMVGQVL True PC9_epitope_Rep3 916.4800366730798 916.47892993586 56.211 2 0.09277613284225239 0.002491295473646296 0.011149174523881015 ['ENSG00000130741|ENST00000253039|EIF2S3'] 1879 10459 AEIEETLQAA True H1975_Epitope_Rep1 1073.5240692296898 1073.5229699358601 45.185 2 0.0927711093895113 0.002491295473646296 0.011150425237790999 ['ENSG00000176903|ENST00000316836|PNMA1'] 31552 9245 GEDYDERVLP True H1975_Epitope_Rep3 1191.54078192299 1191.53968993586 40.552 2 0.09276575979936603 0.002491295473646296 0.011151757298163601 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 76152 11803 NMYGKVVTV True PC9_epitope_Rep2 1009.52665251233 1009.52554993586 50.731 2 0.09276396828970654 0.002505817075353499 0.011152203421988895 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 24667 10842 FALNHPEL True NCI_RA007_Epitope_Rep4 939.48141657207 939.48030993586 48.554 2 0.09275975239273193 0.002505817075353499 0.011153253336407301 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 77498 13909 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41867496793 58.653 1 0.09275789141749008 0.002505817075353499 0.01115371681798065 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 70171 11302 LVPVLSAK True PC9_epitope_Rep1 825.53238951577 825.53128993586 48.352 2 0.09275528966859764 0.002505817075353499 0.01115436482214017 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 88804 9417 QTVAVGVIK True PC9_epitope_Rep3 913.5596668927699 913.55856993586 41.159 2 0.09275490930678187 0.002505817075353499 0.011154459559886913 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 104648 14427 SQTDVKTFL True PC9_epitope_Rep1 1037.53932537101 1037.53822993586 60.317 2 0.0927543057161075 0.002505817075353499 0.011154609899417075 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF'] 116669 8153 TVAVPLVGK True NCI_RA007_Epitope_Rep3 882.5538532363399 882.55274993586 39.182 2 0.09275214069311503 0.002505817075353499 0.01115514916899611 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 2922 5205 AEYNGRLAA True NCI_RA007_Epitope_Rep4 963.4773938207899 963.47628993586 26.557 2 0.0927496534337723 0.002505817075353499 0.011155768732589432 ['ENSG00000101413|ENST00000373433|RPRD1B'] 31452 11753 GEAPALVAV True H1975_Epitope_Rep2 825.45961849833 825.4590749679301 50.284 1 0.092734732165642 0.002505817075353499 0.011159486229955993 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'EPG5|p.R635Afs*6|1|0.08|ENSG00000152223|chr18:45943201-45943201|G/-|frameshift_variant'] 31924 9755 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43153496793 42.511 1 0.09271979079700192 0.002505817075353499 0.011163209913287784 ['ENSG00000100726|ENST00000262319|TELO2'] 2711 7072 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 32.131 1 0.09271715537072196 0.002505817075353499 0.01116386683575458 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 76826 12003 NRAQIQAVI True PC9_epitope_Rep3 1011.58252759567 1011.58142993586 51.196 2 0.09271149351618453 0.002505817075353499 0.011165278268315024 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 96935 12372 SAVPPGTSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 52.586 2 0.09271042649672841 0.002505817075353499 0.011165544282457888 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 98053 10044 SEQPPNSVLP True H1975_Epitope_Rep2 1066.5294889633 1066.52838993586 43.627 2 0.09269673976155621 0.002505817075353499 0.011168956998429897 ['nc|ENSG00000241839|Q8TD55-2|PLEKHO2', 'ENSG00000241839|ENST00000323544|PLEKHO2'] 54339 15578 KYEELFPAF True NCI_RA007_Epitope_Rep2 1142.5648118428596 1142.56370993586 65.305 2 0.09269509138939828 0.002505817075353499 0.011169368078209663 ['ENSG00000105402|ENST00000263354|NAPA'] 88011 16955 QRPAVIGDVL True PC9_epitope_Rep3 1066.61349337078 1066.6123899358602 70.378 2 0.09269407869222267 0.002505817075353499 0.011169620637116089 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 122557 7024 VGFAEAAR True PC9_epitope_Rep1 819.4239016959499 819.42280993586 31.825 2 0.09268685493915967 0.002505817075353499 0.011171422342936095 ['ENSG00000117984|ENST00000236671|CTSD'] 114507 9646 TQAEQTLNV True PC9_epitope_Rep6 1002.49818883502 1002.49708993586 47.457 2 0.09266594633956156 0.002505817075353499 0.01117663879698548 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 3891 9059 AHAVGNVEL True PC9_epitope_Rep2 908.4715801643599 908.47048993586 40.191 2 0.09266302685972835 0.002505817075353499 0.011177367357374726 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU'] 2434 5398 AEQIKHILA True H1975_Epitope_Rep2 1021.5920296502098 1021.59092993586 25.796 2 0.09266066626144825 0.002505817075353499 0.011177956481023777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000458298.1_1_6:86137181-86137394:-|nuORF', 'ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 103525 15098 SPRPPLISV True PC9_epitope_Rep3 964.57056592964 964.56946993586 63.211 2 0.09265284252177396 0.002505817075353499 0.011179909226416394 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 60594 6163 LHHDDPEVL True PC9_epitope_Rep2 1073.51417325233 1073.5130699358601 29.098 2 0.09265107889563752 0.002505817075353499 0.011180349458680771 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 34672 20127 GQDGLYIGV True PC9_epitope_Rep3 920.4603467743199 920.4597949679301 82.672 1 0.09264844604054953 0.002505817075353499 0.011181006696471247 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 21710 17578 ERSPLDQVL True PC9_epitope_Rep5 1055.56112344475 1055.56002993586 72.622 2 0.0926483456684586 0.002505817075353499 0.011181031753012266 ['ENSG00000168994|ENST00000380283|PXDC1'] 58753 7523 LESELIKSA True H1975_Epitope_Rep2 988.5440763982799 988.54296993586 33.888 2 0.09264699125126265 0.002505817075353499 0.011181369870239526 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'ENSG00000090530|ENST00000319332|P3H2'] 45835 6492 ISDLAQHY True H1975_Epitope_Rep3 945.4555957470502 945.45448993586 29.941 2 0.09264565285808576 0.002505817075353499 0.01118170399675642 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 88493 21316 QSVDLVFPV True PC9_epitope_Rep4 1002.5385970950199 1002.53750993586 90.158 2 0.09264437251072391 0.002505817075353499 0.01118202364114835 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 31741 6747 GEGTPGLTA True H1975_Epitope_Rep3 801.38684748089 801.3862949679301 30.905 1 0.09264270340821038 0.002505817075353499 0.01118244035300717 ['nc|ENSG00000095066|Q96ED9-2|HOOK2', 'ENSG00000095066|ENST00000397668|HOOK2'] 2758 8671 AETLAPVQA True H1975_Epitope_Rep3 898.47599683846 898.47544496793 38.351 1 0.09264171049887626 0.002505817075353499 0.011182688251958684 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1', 'WWTR1|p.M267I|1|0.44|ENSG00000018408|chr3:149527940-149527940|C/A|missense_variant', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 35791 15628 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.5172549679301 65.124 1 0.09264038006357984 0.002505817075353499 0.011183020428947798 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 38298 6959 HEFLHEVPA True H1975_Epitope_Rep3 1077.5243440132099 1077.5232499358601 31.729 2 0.09263602904418865 0.002505817075353499 0.011184106836922962 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 106914 7515 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4499749679298 33.906 1 0.09263506566363465 0.002505817075353499 0.011184347397387044 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 36904 19533 GVLPNIQAV True PC9_epitope_Rep4 909.5283667644899 909.52781496793 83.255 1 0.09263224488819397 0.002505817075353499 0.01118505178595914 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 42670 5563 IEIDGTEKA True H1975_Epitope_Rep3 974.49204082542 974.49094993586 26.439 2 0.092630619451429 0.002505817075353499 0.01118545770023228 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 10121 19760 AYVGDLQTL True PC9_epitope_Rep5 978.5022115863 978.50110993586 81.05 2 0.0926186250472662 0.002505817075353499 0.011188453450357736 ['ENSG00000065802|ENST00000264607|ASB1'] 87991 15211 QRNLDNIVL True PC9_epitope_Rep2 1083.6036569630699 1083.60254993586 63.774 2 0.09261030528917674 0.002505817075353499 0.01119053185960297 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 39057 15450 HHSNILLTF True PC9_epitope_Rep4 1080.5716285588 1080.5705299358601 67.36 2 0.09260912407035651 0.002505817075353499 0.01119082697674406 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 6691 8898 AQAEVYKEL True PC9_epitope_Rep6 1049.53932537101 1049.53822993586 44.186 2 0.09260631826479539 0.002505817075353499 0.01119152801221294 ['ENSG00000169710|ENST00000306749|FASN'] 104022 17733 SQDLVYETV True PC9_epitope_Rep1 1052.50260550912 1052.5015099358602 73.007 2 0.09259828130939243 0.002505817075353499 0.011193536290356876 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 29787 17706 FVPIKVEQI True PC9_epitope_Rep2 1071.63283183303 1071.6317299358602 73.389 2 0.09258995467242258 0.002505817075353499 0.011195617314960467 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 103375 4953 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 23.349 2 0.09258908373880312 0.002505817075353499 0.011195835003192494 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 1816 7387 AEIAESVQA True H1975_Epitope_Rep1 916.45017601344 916.44906993586 33.418 2 0.0925883558774736 0.002505817075353499 0.01119601693385391 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 17389 11935 EHDPQYAVI True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 51.23 2 0.09258649010384104 0.002505817075353499 0.01119648330120055 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 14112 4830 DSAPSPPPP True H1975_Epitope_Rep3 863.40249754503 863.40194496793 23.704 1 0.09258176891456657 0.002505817075353499 0.011197663488395905 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 49437 7349 KEYAVNEVVA True NCI_RA007_Epitope_Rep5 1120.57643915572 1120.57534993586 34.946 2 0.09258104547373001 0.002505817075353499 0.01119784434216064 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 24827 20327 FAVFQTTFF True H1975_Epitope_Rep2 1106.54368247546 1106.5425899358602 84.233 2 0.09257947353719354 0.002505817075353499 0.01119823732184685 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 71677 5811 M[Oxidation]EDAKVYVA True H1975_Epitope_Rep2 1040.4848476504399 1040.48374993586 27.343 2 0.09257556654230527 0.002505817075353499 0.011199214116201844 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 15409 18537 EAITHLLGV True PC9_epitope_Rep4 951.5389314481898 951.53782993586 79.377 2 0.09257265980928177 0.002505817075353499 0.011199940885860259 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 38858 4296 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 23.559 2 0.09256967720976564 0.002505817075353499 0.011200686670919549 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 75548 18942 NLAEKLIGV True PC9_epitope_Rep2 955.5702315764698 955.56912993586 78.224 2 0.09256955777447824 0.002505817075353499 0.011200716536135849 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 111121 15083 THEGFNVTL True PC9_epitope_Rep2 1016.4927095317599 1016.49160993586 63.274 2 0.09256623651877562 0.002505817075353499 0.011201547058146546 ['ENST00000489787.1_1_20:48429459-48431791:+|nuORF', 'ENSG00000197818|ENST00000361573|SLC9A8', 'nc|ENSG00000197818|Q9Y2E8-2|SLC9A8'] 108180 20737 SYGDILHVI True PC9_epitope_Rep5 1015.53384606775 1015.5332749679301 84.823 1 0.09256310714813731 0.002505817075353499 0.01120232965033955 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 1194 8196 AEATGAYVP True H1975_Epitope_Rep3 877.41814760917 877.4175949679301 36.506 1 0.09256186412255883 0.002505817075353499 0.011202640520249144 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'nc|ENSG00000126456|Q14653-2|IRF3'] 130117 13454 VSDPVGVLY True H1975_Epitope_Rep1 947.49639792987 947.4958449679301 56.867 1 0.09256145761860872 0.002505817075353499 0.01120274218513551 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 2569 10435 AEQTLSQLP True H1975_Epitope_Rep2 985.5080252427299 985.50692993586 45.153 2 0.09255387245278826 0.002505817075353499 0.011204639363013661 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 52880 9478 KPFGQVIST True PC9_epitope_Rep6 975.5389314481899 975.53782993586 46.704 2 0.09255362953663095 0.002505817075353499 0.011204700125478731 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 8328 4294 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 23.102 2 0.09255086142465746 0.002505817075353499 0.011205392556453048 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 4775 17020 ALDSTNVEL True PC9_epitope_Rep5 960.47639076128 960.47528993586 70.486 2 0.09254982820975349 0.002505817075353499 0.011205651021000634 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 95088 16863 RVADDVFTL True PC9_epitope_Rep6 1034.53965972418 1034.53856993586 77.382 2 0.09254827518932639 0.002505817075353499 0.01120603952847995 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 6150 11584 APM[Oxidation]PPIIHA True PC9_epitope_Rep3 961.50552352537 961.50442993586 49.572 2 0.09254738696721407 0.002505817075353499 0.011206261734093554 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 38930 10333 HHGTSILTL True PC9_epitope_Rep4 977.52942939365 977.52832993586 47.438 2 0.09253745808226005 0.002505817075353499 0.011208745917653399 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-5|PARPBP'] 121953 17471 VFTEVANLF True NCI_RA007_Epitope_Rep3 1038.53859709502 1038.53750993586 76.651 2 0.09253601180796561 0.002505817075353499 0.011209107815664355 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 9622 21313 AYANIISQF True PC9_epitope_Rep3 1025.5181960036098 1025.51767496793 87.276 1 0.0925354578761777 0.002505817075353499 0.011209246427724345 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 103796 12316 SPVYVGRVV True PC9_epitope_Rep1 974.5549158654999 974.55380993586 52.228 2 0.09253511147920025 0.002505817075353499 0.011209333108535125 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 36899 20481 GVLPNIQAV True PC9_epitope_Rep1 909.5283667644899 909.52781496793 83.592 1 0.09253195387433229 0.002505817075353499 0.011210123282601459 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 25593 15312 FELPQTPLA True H1975_Epitope_Rep1 1014.5385970950199 1014.53750993586 64.166 2 0.09253023817431046 0.002505817075353499 0.01121055264969988 ['ENSG00000113369|ENST00000265138|ARRDC3'] 114803 19059 TQLGPPYHIL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 78.34 2 0.09252389990290266 0.002505817075353499 0.011212138986080774 ['ENSG00000119616|ENST00000341162|FCF1'] 69622 12941 LVDPSVYGY True H1975_Epitope_Rep1 1011.49131254943 1011.4907749679301 54.852 1 0.09250886916978546 0.002505817075353499 0.011215901714809497 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 138724 19015 YIPTELDQV True PC9_epitope_Rep4 1076.53899101784 1076.5378899358602 81.231 2 0.09250463785763739 0.002505817075353499 0.01121696117930519 ['ENSG00000149100|ENST00000531120|EIF3M'] 86312 10205 QITQINHGL True PC9_epitope_Rep3 1022.5508931142199 1022.5497899358601 44.204 2 0.09249998243687059 0.002505817075353499 0.011218126944694361 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 8357 12347 ATLGGPAIVHA True PC9_epitope_Rep5 1005.56072952193 1005.55962993586 52.486 2 0.09249593780675187 0.002505817075353499 0.01121913985512938 ['ENSG00000123983|ENST00000357430|ACSL3'] 27751 9366 FPSIVGRP True H1975_Epitope_Rep1 871.49158733295 871.49048993586 40.934 2 0.0924930209589988 0.002505817075353499 0.01121987038506015 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTA1|p.H42L|1|0.34|ENSG00000143632|chr1:229432991-229432991|T/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 114797 19288 TQLGPPYHIL True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 79.412 2 0.09249188161077612 0.002505817075353499 0.011220155749194407 ['ENSG00000119616|ENST00000341162|FCF1'] 98220 3957 SETSGIARP True NCI_RA007_Epitope_Rep3 916.4614094034799 916.46030993586 21.938 2 0.09247625642719375 0.002505817075353499 0.011224069968424571 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 75424 20883 NIVNSIVGV True PC9_epitope_Rep5 913.5232813840499 913.52218993586 85.379 2 0.09246950446077341 0.002505817075353499 0.011225761784741148 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10'] 24573 13323 FAHSFIEL True H1975_Epitope_Rep2 962.4861675993399 962.48506993586 56.377 2 0.09246874934637427 0.002505817075353499 0.011225951006124724 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 45607 20473 IQYIPTELDQV True PC9_epitope_Rep4 1317.68163250025 1317.68052993586 86.896 2 0.09245780710396088 0.002505817075353499 0.01122869332272602 ['ENSG00000149100|ENST00000531120|EIF3M'] 9087 17986 AVIGDVIRV True PC9_epitope_Rep2 940.57056592964 940.56946993586 74.485 2 0.09245607027062532 0.002505817075353499 0.01122912866186969 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 97753 7798 SEIQGLRTV True NCI_RA007_Epitope_Rep4 1001.55055876105 1001.54946993586 36.678 2 0.09245462467932428 0.002505817075353499 0.01122949101309559 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF', 'ENST00000381017.6_1_9:13106966-13119674:-|nuORF'] 121473 9734 VEYEVPEAA True H1975_Epitope_Rep1 1005.4654917244097 1005.46438993586 42.37 2 0.09245060953192809 0.002505817075353499 0.011230497506228123 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 32104 11871 GETEVGFVP True H1975_Epitope_Rep1 933.4443623570098 933.44381496793 50.66 1 0.09244857867109087 0.002505817075353499 0.011231006622870217 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 142922 21450 YYYINYTTI True PC9_epitope_Rep1 1212.5702911461199 1212.56918993586 87.347 2 0.09244690595437259 0.002505817075353499 0.011231425972784946 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 97603 11086 SEEVTPIAV True H1975_Epitope_Rep1 943.4862271689899 943.4856749679301 47.606 1 0.09244603692097826 0.002505817075353499 0.011231643845234538 ['ENSG00000205339|ENST00000379719|IPO7'] 102392 13208 SLTGRLDEV True PC9_epitope_Rep5 988.5189242795999 988.51782993586 55.813 2 0.09243388352873617 0.002505817075353499 0.011234691201679919 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 115535 13232 TRSAIILHL True PC9_epitope_Rep2 1022.62366413166 1022.62256993586 56.174 2 0.09243387150521372 0.002505817075353499 0.011234694216861057 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1', 'ENST00000518921.1_1_8:63055996-63056374:-|nuORF'] 65946 12685 LSDTEVLEY True H1975_Epitope_Rep2 1067.50227115595 1067.5011699358602 53.894 2 0.09243094054182006 0.002505817075353499 0.011235429247794094 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 41083 7537 HTQGPVDGSLY True H1975_Epitope_Rep1 1172.5462016565998 1172.5451099358602 33.985 2 0.09242716492635085 0.002505817075353499 0.011236376168953382 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 6714 7642 AQAPDLQRV True PC9_epitope_Rep4 996.5352430500799 996.53414993586 36.775 2 0.09242024133755561 0.002505817075353499 0.011238112795894675 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 77121 11909 NRMPDQISV True PC9_epitope_Rep1 1058.51787873378 1058.51678993586 50.674 2 0.09240599608264718 0.002505817075353499 0.01124168669956818 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1'] 130220 9891 VSEVSSLNY True H1975_Epitope_Rep2 996.4763907612801 996.47528993586 43.034 2 0.09240326296653364 0.002505817075353499 0.011242372517404394 ['ENSG00000117000|ENST00000372771|RLF'] 99146 12471 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 55.776 2 0.09239120409906176 0.002505817075353499 0.011245398909803023 ['ENSG00000132646|ENST00000379143|PCNA'] 121854 16246 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 67.629 2 0.09237576790477765 0.002505817075353499 0.011249274031852413 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 77185 8528 NRSDPVTL True PC9_epitope_Rep3 900.46649478392 900.46538993586 37.759 2 0.09236748155751971 0.002505817075353499 0.011251354769668818 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 24685 20598 FALPVLERL True PC9_epitope_Rep4 1056.6331661862 1056.63206993586 87.383 2 0.09236151084604244 0.002505817075353499 0.01125285426760533 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 49031 13027 KEFQLFQGV True NCI_RA007_Epitope_Rep3 1094.5760452328998 1094.57494993586 58.513 2 0.09235829082509271 0.002505817075353499 0.01125366302961797 ['ENSG00000068438|ENST00000348411|FTSJ1', 'nc|ENSG00000068438|Q9UET6-2|FTSJ1'] 63056 15372 LLQESLAQA True PC9_epitope_Rep1 971.52876068731 971.52766993586 63.946 2 0.09234540492282084 0.002505817075353499 0.011256900091020434 ['ENSG00000168209|ENST00000307365|DDIT4'] 54085 17483 KVLDILQHI True PC9_epitope_Rep6 1077.65462990677 1077.6535299358602 79.874 2 0.09233674328150533 0.002505817075353499 0.01125907647426419 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 1041 6353 AEAEPPSEV True H1975_Epitope_Rep3 927.41854153199 927.41744993586 29.428 2 0.09233590005970407 0.002505817075353499 0.011259288369262968 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 109620 4912 TEAGAGAVAAA True H1975_Epitope_Rep2 887.4348603024698 887.43431496793 23.976 1 0.09232472029378863 0.002505817075353499 0.011262098114027872 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 115131 11464 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 49.094 2 0.09232403064647143 0.002505817075353499 0.01126227146080969 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 106037 9481 SSYSGVTQL True H1975_Epitope_Rep2 940.4501760134401 940.44962496793 41.437 1 0.09232119996501625 0.002505817075353499 0.011262982995236117 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 62367 19636 LLGPPPVGV True PC9_epitope_Rep2 847.51673945163 847.51564993586 80.915 2 0.09231986021921204 0.002505817075353499 0.011263319775395266 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 16642 5836 EEQHPELTP True H1975_Epitope_Rep3 1078.4931034545798 1078.49200993586 27.463 2 0.09230944585586863 0.002505817075353499 0.011265938023874983 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 9887 21037 AYLKAIVLF True PC9_epitope_Rep2 1036.6321035570397 1036.6310099358602 86.371 2 0.09230507885494792 0.002505817075353499 0.0112670360922305 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 26215 15980 FHDMGGVQL True PC9_epitope_Rep3 1002.4593012284997 1002.4582099358599 66.613 2 0.09230383565649646 0.002505817075353499 0.011267348709054164 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 140259 19444 YRAPELLL True PC9_epitope_Rep5 973.5596668927699 973.55856993586 79.842 2 0.09229979898581259 0.002505817075353499 0.011268363833954034 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 96652 7519 SAINEVVTR True PC9_epitope_Rep4 987.53490869691 987.53380993586 36.289 2 0.09229739788004457 0.002505817075353499 0.011268967695046813 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 114766 5986 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.54912993586 29.644 2 0.09229602287242605 0.002505817075353499 0.011269313513546712 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 42549 7032 IEESGEHIIA True H1975_Epitope_Rep2 1096.540053647 1096.53894993586 31.974 2 0.0922861663212251 0.002505817075353499 0.011271792760209268 ['ENSG00000167658|ENST00000309311|EEF2'] 76942 5627 NRDRTQIAL True PC9_epitope_Rep4 1085.59415490853 1085.59304993586 28.442 2 0.09227366323095822 0.002505817075353499 0.011274938442931336 ['ENSG00000241685|ENST00000262942|ARPC1A'] 96336 10591 RYSSMAASF True PC9_epitope_Rep4 1018.4542158480599 1018.45310993586 48.48 2 0.09227182557632876 0.002505817075353499 0.011275400853093906 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 40313 8522 HQQSIPAVL True NCI_RA007_Epitope_Rep3 991.5450794577898 991.5439899358599 40.592 2 0.09227125364529735 0.002505817075353499 0.011275544772121286 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 104291 20890 SQIISLQTL True PC9_epitope_Rep2 1001.5757108797301 1001.5746099358599 85.796 2 0.09227071284483851 0.002505817075353499 0.011275680859146696 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 137213 11364 YAYEPADTAL True NCI_RA007_Epitope_Rep3 1112.5026055091198 1112.5015099358602 51.818 2 0.09226812271827899 0.002505817075353499 0.01127633266018608 ['ENSG00000106541|ENST00000419304|AGR2'] 95097 6952 RVAPAHGLFLK True NCI_RA007_Epitope_Rep4 1207.71896149883 1207.7173049037901 33.368 3 0.0922579961461297 0.002505817075353499 0.011278881338278635 ['ENST00000493657.1_1_1:1246183-1246756:+|nuORF', 'nc|ENSG00000169972|Q8N0Z8-2|PUSL1', 'ENSG00000169972|ENST00000379031|PUSL1'] 31978 5015 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 24.373 2 0.0922389466991898 0.002505817075353499 0.011283677226155524 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 9585 20994 AYAENIALL True PC9_epitope_Rep1 976.5229470308799 976.52184993586 85.579 2 0.09223335111038448 0.002505817075353499 0.011285086338861015 ['ENSG00000196455|ENST00000356763|PIK3R4'] 43214 18316 IFIQNSKLYF True PC9_epitope_Rep6 1271.69140933831 1271.6903099358601 83.094 2 0.09223202400371998 0.002505817075353499 0.011285420562828632 ['SLC35A5|p.Y300Mfs*8|1|0.19|ENSG00000138459|chr3:112581009-112581009|T/-|frameshift_variant', 'ENSG00000138459|ENST00000492406|SLC35A5'] 108211 11623 SYHPALNAI True PC9_epitope_Rep4 984.5028802926399 984.50178993586 52.466 2 0.09222940142400855 0.002505817075353499 0.011286081071636658 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant', 'BIRC6|p.K712Sfs*9|1|0.29|ENSG00000115760|chr2:32415422-32415422|C/-|frameshift_variant'] 7913 3871 ATALPTGTSK True NCI_RA007_Epitope_Rep5 945.5131106231701 945.51200993586 21.148 2 0.09222749195413966 0.002505817075353499 0.011286562003507994 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 3281 6169 AGFAGDDAPR True PC9_epitope_Rep5 975.4410083120698 975.43990993586 28.714 2 0.0922258366155069 0.002505817075353499 0.011286978943915404 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 98760 10704 SGHLETVIL True NCI_RA007_Epitope_Rep1 967.5338460677499 967.53274993586 45.627 2 0.09222356235921031 0.002505817075353499 0.01128755179877902 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 9725 21845 AYGNVFSAF True PC9_epitope_Rep3 974.4497820906199 974.44868993586 89.329 2 0.09222240945305349 0.002505817075353499 0.011287842211015245 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 41540 19282 HYQDVSCLQF True PC9_epitope_Rep3 1238.53900810118 1238.5379099358602 79.389 2 0.0922187363861415 0.002505817075353499 0.01128876748846094 ['ENSG00000065268|ENST00000585809|WDR18'] 26900 21679 FLDGNELTL True PC9_epitope_Rep5 1020.51277627 1020.51166993586 88.436 2 0.09221656677174195 0.002505817075353499 0.011289314066964753 ['ENSG00000213719|ENST00000375784|CLIC1'] 26989 21058 FLEKLLPPV True PC9_epitope_Rep3 1054.6426682407398 1054.6415699358602 86.281 2 0.09221566089968818 0.002505817075353499 0.011289542285540978 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 6332 9337 APRPTIINA True PC9_epitope_Rep5 951.5501648382299 951.54906993586 40.868 2 0.09221551644325605 0.002505817075353499 0.01128957867921007 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 86155 5636 QIDREHQNFY True H1975_Epitope_Rep3 1348.61601255192 1348.6143749037901 26.716 3 0.0922117597603488 0.002505817075353499 0.011290525159182614 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 11878 16901 DHIHIIAL True PC9_epitope_Rep5 930.52870111766 930.52760993586 70.024 2 0.09220496501697169 0.002505817075353499 0.011292237256511267 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 1842 5602 AEIDEEPVSKA True H1975_Epitope_Rep3 1186.5717476981001 1186.57064993586 26.588 2 0.09220418444968702 0.002505817075353499 0.011292433954788223 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000550343.1_1_12:57108115-57108487:-|nuORF', 'ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 96723 20450 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.5635749679301 84.724 1 0.09220038233871557 0.002505817075353499 0.011293392110434728 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 119572 12061 VATGVISTL True H1975_Epitope_Rep2 859.50148331031 859.5009349679301 51.474 1 0.09218564167572714 0.002505817075353499 0.011297107578427543 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ENST00000464970.1_1_7:65554274-65556745:+|nuORF'] 128301 6181 VPPPPPIAR True H1975_Epitope_Rep3 942.56508662638 942.56398993586 28.786 2 0.0921778192866378 0.002505817075353499 0.011299079726991885 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 42975 7600 IESRTLAIA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 34.186 2 0.0921769031586885 0.002505817075353499 0.0112993107187639 ['ENSG00000147872|ENST00000276914|PLIN2'] 87992 13685 QRNLDNIVL True PC9_epitope_Rep6 1083.6036569630699 1083.60254993586 64.424 2 0.09216863002820305 0.002505817075353499 0.01130139690217733 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 42980 7134 IESRTLAIA True NCI_RA007_Epitope_Rep3 972.5603951687599 972.55928993586 35.181 2 0.0921673575320236 0.002505817075353499 0.011301717811972915 ['ENSG00000147872|ENST00000276914|PLIN2'] 83538 12181 PTVEVDLYTAK True H1975_Epitope_Rep1 1234.6445187155398 1234.64342993586 51.873 2 0.09216727816851383 0.002505817075353499 0.011301737826879429 ['nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 35932 9944 GTSSLFIYK True NCI_RA007_Epitope_Rep3 1014.53859709502 1014.53750993586 46.196 2 0.09215916914522224 0.002505817075353499 0.011303783041474303 ['ENSG00000179941|ENST00000650064|BBS10'] 119309 17606 VAMLPGLAL True NCI_RA007_Epitope_Rep3 883.5201105799099 883.51900993586 77.209 2 0.09215045069677433 0.002505817075353499 0.011305982353653958 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 70941 17601 LYGKIAEAF True PC9_epitope_Rep3 1010.5436824754598 1010.54258993586 72.889 2 0.09214845787857559 0.002505817075353499 0.011306485118130276 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 73744 10281 NADHTTLLL True NCI_RA007_Epitope_Rep4 996.52400966004 996.52290993586 46.4 2 0.09214494707351592 0.002505817075353499 0.011307370904337803 ['VPS11|p.S379Dfs*2|1|0.05|ENSG00000160695|chr11:119081555-119081556|-/GACTGACC|frameshift_variant', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENSG00000160695|ENST00000621676|VPS11'] 134595 21584 VYSIVPQSW True PC9_epitope_Rep1 1077.54949613189 1077.54897496793 87.846 1 0.09214133040989754 0.002505817075353499 0.011308283467792613 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 71955 13331 MESPFITSP True H1975_Epitope_Rep1 1007.46338354943 1007.46287496793 56.382 1 0.09214120653196484 0.002505817075353499 0.011308314726145905 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 97440 7293 SEEERVQIVSA True H1975_Epitope_Rep2 1245.62009487285 1245.61898993586 32.991 2 0.09213513201076409 0.002505817075353499 0.011309847622127108 ['ENSG00000124201|ENST00000396105|ZNFX1'] 128230 16082 VPNLQTVSV True PC9_epitope_Rep6 955.53384606775 955.53274993586 74.19 2 0.09213405501591253 0.002505817075353499 0.01131011942067212 ['ENSG00000105866|ENST00000222584|SP4'] 1982 12260 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47511496793 52.242 1 0.09212971754763935 0.002505817075353499 0.01131121411960647 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 68436 4777 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 23.464 2 0.09212626144107795 0.002505817075353499 0.011312086450646203 ['ENSG00000124570|ENST00000380539|SERPINB6'] 7145 9998 AQYDRQIRL True PC9_epitope_Rep5 1161.6254550368099 1161.62380490379 43.432 3 0.09212054397495963 0.002505817075353499 0.011313529695310043 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 118517 15004 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.5233099358602 65.651 2 0.09209381714808895 0.002505817075353499 0.011320278593355567 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 141767 10694 YVADLVHSA True PC9_epitope_Rep4 973.4868958753299 973.48578993586 48.888 2 0.09209019964536908 0.002505817075353499 0.011321192356787513 ['ENSG00000179820|ENST00000391770|MYADM'] 91699 7027 RKAGIFQSV True NCI_RA007_Epitope_Rep4 1004.57671393924 1004.57560993586 33.656 2 0.0920889655566808 0.002505817075353499 0.011321504097536081 ['ENSG00000164919|ENST00000520468|COX6C'] 119679 12222 VAVGVIKAV True PC9_epitope_Rep2 854.5589386167799 854.55784993586 52.325 2 0.09207888942055178 0.002505817075353499 0.011324049715361108 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 111032 10948 THDEAINVL True PC9_epitope_Rep6 1010.5032742154599 1010.50216993586 52.99 2 0.09207642432044669 0.002505817075353499 0.011324672576688337 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 89072 13799 QVMQGMGVSA True PC9_epitope_Rep5 1006.4575869763398 1006.45707496793 58.097 1 0.09206435551439461 0.002505817075353499 0.011327722492853638 ['ENSG00000169813|ENST00000682386|HNRNPF'] 60119 14052 LGLTNQPEL True PC9_epitope_Rep4 983.52876068731 983.52766993586 61.961 2 0.09206267541287899 0.002505817075353499 0.01132814713421553 ['ENSG00000179626|ENST00000641569|OR6C4', 'OR6C4|p.L38*|1|0.39|ENSG00000179626|chr12:55551337-55551337|C/-|frameshift_variant', 'OR6C4|p.H52Tfs*16|1|0.15|ENSG00000179626|chr12:55551376-55551376|C/-|frameshift_variant'] 108223 19342 SYIALPLTL True NCI_RA007_Epitope_Rep5 989.57973363101 989.57862993586 81.278 2 0.0920599780768459 0.002505817075353499 0.011328828910576762 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 134436 22505 VYPNWAIGL True PC9_epitope_Rep1 1031.5440168286298 1031.54290993586 91.367 2 0.09205675038380665 0.002505817075353499 0.011329644790669391 ['ENSG00000131389|ENST00000622186|SLC6A6'] 1545 9742 AEEPWGEEA True H1975_Epitope_Rep2 1016.4087051242799 1016.4081749679301 42.459 1 0.09204553028639326 0.002505817075353499 0.011332481384321526 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 13978 7666 DRDPASGTAL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 34.431 2 0.09203972062498399 0.002505817075353499 0.011333950410621001 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 17525 15594 EHGDQDYIW True PC9_epitope_Rep2 1161.47270236317 1161.4716099358602 65.258 2 0.09203777263473834 0.002505817075353499 0.011334443018293242 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 6322 9297 APRPTIINA True PC9_epitope_Rep1 951.5501648382299 951.54906993586 40.615 2 0.09203579076013176 0.002505817075353499 0.011334944215479184 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 52579 19990 KLILLITQV True PC9_epitope_Rep4 1039.7005174700298 1039.69942993586 85.025 2 0.09202004999039652 0.002505817075353499 0.011338925652493904 ['ENSG00000163811|ENST00000407426|WDR43'] 31467 5540 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.3913849679301 26.358 1 0.09199625396851983 0.002505817075353499 0.01134494708609944 ['ENSG00000131116|ENST00000300811|ZNF428'] 14079 5762 DRSKSYEL True PC9_epitope_Rep1 996.4876241513199 996.48652993586 26.98 2 0.09198818816192803 0.002505817075353499 0.011346988775762028 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1'] 19652 14537 ELRARQLEL True PC9_epitope_Rep5 1126.64585612822 1126.64422490379 60.915 3 0.09198600259497831 0.002505817075353499 0.011347542066166278 ['RCCD1-BLM|2|fusion', 'RCCD1-BLM|1|fusion', 'ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 28883 15123 FTDEEVDELYR True PC9_epitope_Rep6 1414.6252398229399 1414.62414993586 70.234 2 0.09198452846854374 0.002505817075353499 0.011347915265252343 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 35789 14147 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.5172549679301 62.319 1 0.09197924909882124 0.002505817075353499 0.01134925191906731 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 7965 13081 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.46986993586 55.439 2 0.09197820208930585 0.002505817075353499 0.011349517023236751 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 77504 14065 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41867496793 59.253 1 0.09196964988550849 0.002505817075353499 0.01135168267225126 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 43181 15203 IFGVTTLDIVR True H1975_Epitope_Rep1 1232.71287305888 1232.71176993586 63.741 2 0.09196565501015676 0.002505817075353499 0.011352694416877094 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 54946 7004 KYQAVTATL True NCI_RA007_Epitope_Rep3 993.5494961318899 993.54838993586 34.66 2 0.09195737662278837 0.002505817075353499 0.01135479127864939 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 111506 15337 THYDHVLIEL True PC9_epitope_Rep6 1238.6295373577398 1238.62789490379 71.122 3 0.0919549036141975 0.002505817075353499 0.011355417746912407 ['ENSG00000076003|ENST00000264156|MCM6'] 24059 12265 EYNSDLHQF True PC9_epitope_Rep3 1151.4883524273098 1151.48724993586 52.205 2 0.0919493684250365 0.002505817075353499 0.011356820052634308 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 134039 9524 VYITRAQLM True NCI_RA007_Epitope_Rep3 1093.5954007784899 1093.59430993586 44.555 2 0.09194778257438492 0.002505817075353499 0.01135722184829047 ['ENSG00000160877|ENST00000292431|NACC1'] 17712 9463 EHNIFHNEV True PC9_epitope_Rep5 1137.5203212619301 1137.51922993586 41.355 2 0.09194701752065895 0.002505817075353499 0.011357415689310585 ['ENSG00000118898|ENST00000345988|PPL'] 30314 8650 GAAKDLPGV True PC9_epitope_Rep3 826.4548674710599 826.45376993586 38.224 2 0.09194452728067859 0.002505817075353499 0.011358046661049814 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 132241 14887 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 69.249 2 0.09194009094028792 0.002505817075353499 0.01135917081395619 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 93078 11719 RPNDIMAEV True PC9_epitope_Rep6 1043.50697969691 1043.50588993586 56.223 2 0.09193198277121833 0.002505817075353499 0.0113612256678599 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 103786 16178 SPVVPQISA True PC9_epitope_Rep3 896.4967322830399 896.49562993586 67.367 2 0.09192551506949805 0.002505817075353499 0.011362865030728855 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 99386 18567 SHTSVPLLL True PC9_epitope_Rep1 965.55458151233 965.55348993586 76.205 2 0.09192117472318585 0.002505817075353499 0.011363965300402564 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant', 'ENST00000495983.1_1_9:130672770-130677033:-|nuORF', 'nc|ENSG00000184005|Q8NDV1-2|ST6GALNAC3', 'ENSG00000136840|ENST00000335791|ST6GALNAC4', 'ENSG00000184005|ENST00000328299|ST6GALNAC3'] 84250 22885 PYNDYFEYF True PC9_epitope_Rep1 1256.50260550912 1256.50207496793 92.822 1 0.09191950483305514 0.002505817075353499 0.011364388641339533 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 137877 11305 YETLTITQA True H1975_Epitope_Rep3 1038.5233409536997 1038.52277496793 48.591 1 0.09191924629043899 0.002505817075353499 0.01136445418691281 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 24277 14346 EYTEKMVSI True PC9_epitope_Rep5 1098.52671208198 1098.52560993586 60.182 2 0.09190838105180643 0.002505817075353499 0.011367209059992273 ['ENSG00000126749|ENST00000599672|EMG1'] 121372 6170 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 28.802 2 0.09189817758525838 0.002505817075353499 0.011369796717831747 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 115616 13065 TRVDPLTL True PC9_epitope_Rep6 913.5232813840499 913.52218993586 61.862 2 0.09189698576588014 0.002505817075353499 0.011370099006515809 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 73017 20050 MRASSFLIV True PC9_epitope_Rep3 1022.5582869937799 1022.55718993586 82.372 2 0.09188585651079727 0.002505817075353499 0.011372922157726688 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 28892 16736 FTDESYLELY True H1975_Epitope_Rep3 1278.5655996885 1278.56450993586 69.901 2 0.09188267061916876 0.002505817075353499 0.011373730443239655 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 134772 18520 VYTTTVHWL True PC9_epitope_Rep2 1118.5760452329 1118.57494993586 76.581 2 0.09187620206041364 0.002505817075353499 0.01137537173454478 ['ENSG00000174231|ENST00000304992|PRPF8'] 104683 16295 SQTSATFQL True PC9_epitope_Rep4 981.4767251144499 981.47562993586 70.637 2 0.09187373532932487 0.002505817075353499 0.011375997686485098 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 17390 12028 EHDPQYAVI True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 51.582 2 0.09187169889358696 0.002505817075353499 0.011376514472290425 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 116672 8795 TVAVPLVGK True NCI_RA007_Epitope_Rep4 882.5538532363399 882.55274993586 40.642 2 0.09186790345057623 0.002505817075353499 0.011377477700355012 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 107566 9052 SVPEGPWWRK True NCI_RA007_Epitope_Rep4 1240.63529144452 1240.6341899358601 41.652 2 0.09185550345976866 0.002505817075353499 0.011380625176184683 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 90630 4545 REPNAEVPRP True H1975_Epitope_Rep2 1163.6047195922297 1163.60308490379 22.591 3 0.09185232956421108 0.002505817075353499 0.011381430935252186 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 25379 9866 FEAPATINSA True H1975_Epitope_Rep3 1019.49237517859 1019.49187496793 42.979 1 0.09185137051273395 0.002505817075353499 0.011381674420958261 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 88303 6191 QSEVESTEY True H1975_Epitope_Rep2 1070.44039917538 1070.4393099358601 28.786 2 0.0918513527853208 0.002505817075353499 0.011381678921672144 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 89050 20224 QVLPHLLEV True PC9_epitope_Rep3 1046.6124307416198 1046.61132993586 83.052 2 0.0918413389764621 0.002505817075353499 0.011384221541391678 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 43844 11970 IHSPVVNEL True PC9_epitope_Rep4 1006.54474510462 1006.54364993586 53.835 2 0.0918384573827424 0.002505817075353499 0.011384953310527588 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 40527 5347 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 28.421 2 0.09183334212408678 0.002505817075353499 0.011386252419750484 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 75734 24631 NLLDLLTEV True PC9_epitope_Rep5 1028.57537652656 1028.5748749679299 99.87 1 0.09183284908847565 0.002505817075353499 0.011386377642176409 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 23975 18523 EYMEHTYLI True PC9_epitope_Rep5 1197.5376111188498 1197.53650993586 76.273 2 0.0918292015862869 0.002505817075353499 0.011387304084531598 ['ENSG00000141447|ENST00000319481|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-2|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-4|OSBPL1A'] 88489 22256 QSVDLVFPV True PC9_epitope_Rep1 1002.5385970950199 1002.53750993586 90.426 2 0.09182252795057626 0.002505817075353499 0.011388999330573864 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 57424 14400 LEATINELV True H1975_Epitope_Rep3 1000.5440763982799 1000.54357496793 60.743 1 0.09181106398119178 0.002505817075353499 0.011391911982313117 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 42981 7695 IESRTLAIA True NCI_RA007_Epitope_Rep4 972.5603951687599 972.55928993586 36.263 2 0.09180952525503763 0.002505817075353499 0.011392302980363919 ['ENSG00000147872|ENST00000276914|PLIN2'] 130992 5810 VTDPSIPIRK True NCI_RA007_Epitope_Rep4 1124.65535818276 1124.6537249037901 28.972 3 0.09179451106010612 0.002505817075353499 0.011396118830650344 ['ENSG00000102034|ENST00000308167|ELF4'] 93361 10475 RPYQPLPEA True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 45.23 2 0.09179290663300696 0.002505817075353499 0.011396526666673134 ['ENSG00000165476|ENST00000373758|REEP3'] 77266 10704 NSATGVPTV True PC9_epitope_Rep2 844.42904664604 844.4279499358599 46.488 2 0.09179241230717472 0.002505817075353499 0.011396652324208879 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 88163 7753 QRVDSPVTV True PC9_epitope_Rep6 999.5349086969098 999.53380993586 39.183 2 0.09178875792245586 0.002535421327367636 0.011397581308886223 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 107887 12395 SVVPDVRSV True PC9_epitope_Rep2 956.52909504048 956.52798993586 52.987 2 0.09178612534758618 0.002535421327367636 0.011398250582783738 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 7662 8729 ASITALEAK True PC9_epitope_Rep1 902.50729696674 902.50618993586 38.413 2 0.09178112730336593 0.002535421327367636 0.01139952132744018 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 104494 21711 SQMATILNL True PC9_epitope_Rep1 989.5215671318899 989.52046993586 88.344 2 0.09177547633620989 0.002564102564102564 0.011400958238486778 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 88730 19217 QTIQDIVTV True PC9_epitope_Rep4 1015.5549754351499 1015.5544749679301 82.019 1 0.09176517515583318 0.002564102564102564 0.011403578033717764 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 27808 10142 FQDDPHAGL True PC9_epitope_Rep3 998.4457593393398 998.44466993586 43.964 2 0.09176274738914388 0.002564102564102564 0.011404195546220384 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 93400 7723 RQASPNIVI True NCI_RA007_Epitope_Rep3 996.5716285588 996.57052993586 37.501 2 0.09176257801739074 0.002564102564102564 0.011404238627809624 ['nc|ENSG00000144566|P20339-2|RAB5A', 'ENSG00000144566|ENST00000273047|RAB5A', 'ENSG00000108774|ENST00000346213|RAB5C', 'nc|ENSG00000108774|P51148-2|RAB5C', 'ENST00000469122.5_1_3:19992498-20019915:+|nuORF', 'ENST00000473608.1_1_3:20017064-20025312:+|nuORF'] 15440 18450 EALFQPSFL True H1975_Epitope_Rep1 1050.53859709502 1050.53750993586 76.91 2 0.091755038045691 0.002564102564102564 0.011406156659817614 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 16593 9452 EENFAVEA True H1975_Epitope_Rep3 907.3923267841499 907.39177496793 41.361 1 0.09174335782691921 0.002564102564102564 0.011409128499450128 ['ENSG00000026025|ENST00000544301|VIM'] 23496 5124 EVVEEAENGR True PC9_epitope_Rep1 1130.5203808315798 1130.5192899358601 24.563 2 0.09173698615955464 0.002564102564102564 0.011410749974904415 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 90371 6000 REHDIRVSL True NCI_RA007_Epitope_Rep4 1123.60980497267 1123.60816490379 29.698 3 0.09173698579902335 0.002564102564102564 0.01141075006665937 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 90337 12820 REFEMWAP True NCI_RA007_Epitope_Rep5 1064.4749512926398 1064.47384993586 55.994 2 0.09173143135720822 0.002564102564102564 0.011412163751074927 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 97462 11878 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 50.769 2 0.09173061708105022 0.002564102564102564 0.011412371009889849 ['ENSG00000135900|ENST00000258383|MRPL44'] 120619 10881 VEIAYSDVA True H1975_Epitope_Rep1 965.4705771048499 965.47002496793 46.813 1 0.09173040072324068 0.002564102564102564 0.011412426080336645 ['ENSG00000169504|ENST00000374379|CLIC4'] 109901 11755 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 50.291 1 0.0917268267386103 0.002564102564102564 0.011413335817861343 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 104201 11919 SQFSGKITV True PC9_epitope_Rep5 965.51819600361 965.51708993586 50.843 2 0.0917262317534055 0.002564102564102564 0.011413487274647518 ['ENSG00000075568|ENST00000186436|TMEM131'] 1058 7326 AEAGALPAAA True H1975_Epitope_Rep2 840.4341320264799 840.4335849679301 33.12 1 0.09171262691553524 0.002564102564102564 0.011416950981611634 ['ENSG00000086544|ENST00000263370|ITPKC'] 47996 19223 IYKSIMEQF True PC9_epitope_Rep1 1157.57908200801 1157.5779899358602 78.738 2 0.09170568688471605 0.002564102564102564 0.011418718254042599 ['ENSG00000128298|ENST00000381669|BAIAP2L2', 'nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'BAIAP2L2|p.S465Afs*27|1|0.17|ENSG00000128298|chr22:38086317-38086317|G/-|frameshift_variant'] 77019 10445 NRIANQVAI True PC9_epitope_Rep5 997.5668775315298 997.56578993586 45.164 2 0.09169406229507182 0.002585515171327528 0.011421679026099252 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 24449 8749 FADLSEAANR True PC9_epitope_Rep6 1092.5199869087598 1092.5188899358602 43.543 2 0.09169072602247147 0.002585515171327528 0.011422528906004335 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 105307 9336 SRNSNTVVF True PC9_epitope_Rep3 1022.5145076055 1022.5134099358601 40.85 2 0.09168941701095919 0.002585515171327528 0.011422862379118928 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4'] 87435 13986 QPYMPTVSA True PC9_epitope_Rep6 992.4637179025999 992.4631649679301 65.654 1 0.09168723884416616 0.002585515171327528 0.011423417291612892 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 25543 20165 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54732993586 83.913 2 0.09167226582280862 0.002585515171327528 0.011427232528962163 ['ENSG00000125356|ENST00000371437|NDUFA1'] 40209 11083 HQGPATTVAF True PC9_epitope_Rep3 1027.50869394907 1027.50758993586 47.629 2 0.09167207391790426 0.002585515171327528 0.011427281435600652 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 95812 10232 RYIPTAAAF True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.53816993586 46.214 2 0.09167056891895087 0.002585515171327528 0.011427664988904667 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 49950 17874 KILQELPSV True PC9_epitope_Rep5 1025.6120963884498 1025.61098993586 73.771 2 0.09166788885791359 0.002585515171327528 0.011428348040373062 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 1709 10008 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 43.485 1 0.09166743555045709 0.002585515171327528 0.011428463576017912 ['ENSG00000010292|ENST00000315579|NCAPD2'] 667 6666 AATKVTTVL True H1975_Epitope_Rep2 902.54368247546 902.54258993586 30.549 2 0.09166369805885365 0.002585515171327528 0.01142941620238011 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 128021 12282 VPIYEGYALPH True H1975_Epitope_Rep3 1257.63937376545 1257.63826993586 52.421 2 0.09166114403809836 0.002585515171327528 0.011430067224397667 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 28068 17743 FQSSAVMAL True PC9_epitope_Rep6 952.4688032830398 952.46770993586 80.884 2 0.09165359152538263 0.002585515171327528 0.011431992571868494 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 86104 9587 QHTPTSITL True PC9_epitope_Rep6 996.52400966004 996.52290993586 47.183 2 0.09165033694068701 0.002585515171327528 0.011432822351644722 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 43542 8836 IGQGYLIKDGK True PC9_epitope_Rep5 1190.66592286646 1190.66428490379 38.934 3 0.09163266056578728 0.002585515171327528 0.011437330067837337 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 7318 7828 ARNTVTQVL True PC9_epitope_Rep6 1000.5665431783599 1000.56544993586 39.505 2 0.0916326586549919 0.002585515171327528 0.011437330555207235 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 32133 6111 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40194496793 28.485 1 0.09162554863337517 0.002585515171327528 0.011439144182678027 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 89526 20392 QYLKVEQLF True PC9_epitope_Rep5 1166.6335601090198 1166.6324699358602 83.474 2 0.09161912958305966 0.002585515171327528 0.011440781791054469 ['ENSG00000061938|ENST00000672887|TNK2', 'nc|ENSG00000061938|Q07912|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF'] 25394 15337 FEDDAIQLV True H1975_Epitope_Rep3 1048.50769088956 1048.50717496793 64.405 1 0.09161733374891626 0.002585515171327528 0.011441239978522288 ['ENSG00000085840|ENST00000371568|ORC1'] 737 19879 AAVLSVPAV True PC9_epitope_Rep1 825.4960040070499 825.49490993586 81.284 2 0.09161615404982161 0.002585515171327528 0.011441540975328486 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 111907 15375 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.53308993586 64.149 2 0.09161570676726294 0.002585515171327528 0.011441655100140113 ['ENSG00000213719|ENST00000375784|CLIC1'] 9031 11125 AVHDSFVAV True PC9_epitope_Rep4 943.4763311916299 943.4752299358599 50.569 2 0.09160153792507193 0.002585515171327528 0.011445270859924 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 85035 12921 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.5380449679301 54.814 1 0.09160119129267381 0.002585515171327528 0.011445359330934806 ['ENSG00000139233|ENST00000266604|LLPH'] 36810 23594 GVLENIFGV True PC9_epitope_Rep1 946.5123823471798 946.51128993586 95.542 2 0.09159748955626683 0.002585515171327528 0.011446304165801568 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 95346 3774 RVSVVAEPK True NCI_RA007_Epitope_Rep4 983.5763795860698 983.57528993586 20.686 2 0.0915972201145965 0.002585515171327528 0.011446372941247073 ['ENST00000560403.5_1_14:24610645-24610756:-|nuORF', 'ENST00000216799.8_1_14:24610479-24610756:-|nuORF'] 27889 11100 FQDRPVSSL True PC9_epitope_Rep1 1047.53490869691 1047.53380993586 47.583 2 0.09158679275198842 0.002585515171327528 0.01144903484426707 ['ENSG00000130147|ENST00000392011|SH3BP4'] 17645 13363 EHIVPNAEL True PC9_epitope_Rep3 1020.52400966004 1020.52290993586 56.434 2 0.09157700749818536 0.002585515171327528 0.011451533363103599 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 16732 6517 EESNYELEGK True PC9_epitope_Rep3 1196.5197121252397 1196.51860993586 30.095 2 0.09156670679238244 0.002585515171327528 0.011454164053348542 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 57427 14936 LEATINELV True NCI_RA007_Epitope_Rep1 1000.5440763982799 1000.54296993586 62.159 2 0.0915379549872514 0.002585515171327528 0.011461509988716813 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 54432 15112 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.69921490379 66.942 3 0.09153349689201687 0.002585515171327528 0.01146264940848413 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 30315 8738 GAAKDLPGV True PC9_epitope_Rep3 826.4548674710599 826.45376993586 38.565 2 0.09152677698583656 0.002585515171327528 0.011464367114835039 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 61927 18929 LLDGFLVNY True H1975_Epitope_Rep2 1052.55424715916 1052.5531499358601 78.577 2 0.09152592453633063 0.002585515171327528 0.011464585030840375 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D'] 115228 4535 TRDYSQPTAA True PC9_epitope_Rep5 1108.51490152832 1108.51380993586 22.511 2 0.09151853017212638 0.002585515171327528 0.011466475454540772 ['ENSG00000078081|ENST00000265598|LAMP3'] 34752 20622 GQFGVGFYSA True PC9_epitope_Rep1 1031.4712458111896 1031.4706749679299 84.141 1 0.09151354017183436 0.002585515171327528 0.011467751351861198 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 32609 15600 GGIDRVYEI True PC9_epitope_Rep1 1020.52400966004 1020.52290993586 64.825 2 0.0915128997465257 0.002585515171327528 0.01146791511248398 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 121474 9938 VEYEVPEAA True H1975_Epitope_Rep2 1005.4654917244097 1005.46438993586 43.215 2 0.09151073175342504 0.002585515171327528 0.01146846949787841 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 98911 13421 SHADLAGVPL True PC9_epitope_Rep6 978.5134449763399 978.51234993586 63.304 2 0.09150815834639038 0.002585515171327528 0.011469127586116205 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 14149 11919 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 50.926 2 0.09150540128562522 0.002585515171327528 0.011469832679186874 ['ENSG00000149823|ENST00000279281|VPS51'] 93026 12334 RPLEVAIEA True PC9_epitope_Rep4 996.5603951687599 996.55928993586 55.252 2 0.09149616565472268 0.002585515171327528 0.011472194906663149 ['ENSG00000178921|ENST00000314666|PFAS'] 99745 20349 SIIGRLLEV True PC9_epitope_Rep4 998.6124307416198 998.61132993586 86.415 2 0.09148995433467556 0.002585515171327528 0.011473783855621943 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 76909 14679 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 61.467 2 0.09148334036205256 0.002585515171327528 0.011475476038478144 ['ENSG00000013523|ENST00000251089|ANGEL1'] 77262 11057 NSATGVPTV True PC9_epitope_Rep1 844.42904664604 844.4279499358599 47.42 2 0.09147996631725276 0.002585515171327528 0.011476339377914504 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 48546 19949 KALQFLEEV True PC9_epitope_Rep5 1075.5913609438699 1075.59026993586 81.786 2 0.09147643482857676 0.002585515171327528 0.011477243069509977 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 21809 9443 ERYKEVAEL True PC9_epitope_Rep5 1135.5873381925899 1135.58569490379 41.278 3 0.09147595707301578 0.002585515171327528 0.011477365330124664 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 88678 13637 QTETGTPYMLY True H1975_Epitope_Rep3 1302.5802042068199 1302.57967496793 57.744 1 0.09147544077495129 0.002585515171327528 0.011477497455393176 ['ENSG00000167325|ENST00000300738|RRM1'] 73911 16820 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.54258993586 69.945 2 0.09146908793590589 0.002585515171327528 0.011479123321439683 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 7141 5364 AQYDQPLEK True NCI_RA007_Epitope_Rep4 1090.5294889632999 1090.52838993586 27.2 2 0.09146714164591875 0.002585515171327528 0.011479621474201791 ['ENSG00000108599|ENST00000225737|AKAP10'] 129331 13116 VQYNEPLKV True PC9_epitope_Rep3 1088.5866099165999 1088.58550993586 55.472 2 0.09146671447453582 0.002585515171327528 0.011479730811424185 ['ENSG00000148843|ENST00000369797|PDCD11'] 9097 22169 AVIGGLVYL True PC9_epitope_Rep2 903.5429541994699 903.5424049679301 90.761 1 0.09146039058191847 0.002585515171327528 0.011481349567285493 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 124491 8409 VGVNGFGR True PC9_epitope_Rep5 804.4242360491198 804.42312993586 37.286 2 0.09144479939032496 0.002585515171327528 0.011485341440543454 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 66045 11847 LSEGVTISY True H1975_Epitope_Rep2 967.4862271689901 967.4856749679301 50.647 1 0.09144152864091654 0.002585515171327528 0.011486179030111465 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 32593 14113 GGHGPSFPL True PC9_epitope_Rep3 867.42390169595 867.42280993586 59.371 2 0.09143999323569502 0.002585515171327528 0.011486572244187135 ['ENSG00000079246|ENST00000392132|XRCC5'] 107858 16400 SVVGSNQLIEA True PC9_epitope_Rep2 1115.58225281215 1115.5811499358601 68.327 2 0.0914383288248221 0.002585515171327528 0.011486998510752652 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 104462 15888 SQLPPLREI True PC9_epitope_Rep1 1051.60259433391 1051.6014899358602 65.923 2 0.09143808228133836 0.002585515171327528 0.011487061653434378 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 118438 16721 TYPENWRAF True PC9_epitope_Rep4 1182.5458077337798 1182.54470993586 72.286 2 0.09143009221470501 0.002585515171327528 0.011489108181437172 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 137182 9622 YAYDGKDYLA True NCI_RA007_Epitope_Rep1 1177.5291546101298 1177.52804993586 41.426 2 0.0914223612195703 0.002585515171327528 0.011491088681355335 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 90859 9262 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 40.584 2 0.09142013322012027 0.002585515171327528 0.011491659502701554 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 73900 18657 NAVVELVTV True PC9_epitope_Rep6 942.5385970950199 942.5380449679301 84.407 1 0.09140768076530593 0.002585515171327528 0.011494850360597194 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 35941 4420 GTSSVIVSR True NCI_RA007_Epitope_Rep4 904.4977949122 904.49668993586 23.363 2 0.09140662609006552 0.002585515171327528 0.011495120652611778 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 124715 14549 VHAEEVIVL True PC9_epitope_Rep6 1007.5651461960299 1007.56404993586 67.857 2 0.09139656535348736 0.002585515171327528 0.011497699319508786 ['ENSG00000120733|ENST00000314358|KDM3B'] 11847 5584 DHHENKYLL True PC9_epitope_Rep6 1167.56727145435 1167.56563490379 29.526 3 0.09139527373053025 0.002585515171327528 0.011498030415033346 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 93071 14045 RPNDIMAEV True PC9_epitope_Rep3 1043.50697969691 1043.50588993586 59.114 2 0.09139296712926852 0.002585515171327528 0.01149862171327823 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 103716 5768 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 27.579 2 0.09137873912886509 0.002585515171327528 0.011502269704626934 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 78665 13689 NYVQAVEEF True NCI_RA007_Epitope_Rep3 1097.5029398622898 1097.50184993586 61.158 2 0.0913769397058706 0.002585515171327528 0.01150273114621338 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 40111 9079 HPYFYAPE True H1975_Epitope_Rep3 1022.4497820906199 1022.44868993586 39.909 2 0.09136374393101818 0.002585515171327528 0.011506115588894658 ['CON__P02769', 'ALB|p.R169I|1|0.48|ENSG00000163631|chr4:73409378-73409378|G/T|missense_variant', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 142368 15307 YYEKLHTYF True PC9_epitope_Rep1 1262.5971746003 1262.59552490379 63.699 3 0.0913604654709689 0.002585515171327528 0.011506956592281622 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 115233 8856 TREAGSALL True PC9_epitope_Rep5 916.4977949121999 916.49668993586 39.01 2 0.09133681078904725 0.002585515171327528 0.01151302631053082 ['ENSG00000145386|ENST00000274026|CCNA2'] 96796 9244 SAQGSDVSLTA True PC9_epitope_Rep4 1034.48801807414 1034.4869299358602 43.154 2 0.09133560567687891 0.002585515171327528 0.011513335619802145 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 8978 12865 AVGKIFSNV True PC9_epitope_Rep2 933.52836676449 933.52726993586 54.786 2 0.09132868039844726 0.002585515171327528 0.011515113244211483 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 75928 19844 NLSEGVLSV True PC9_epitope_Rep5 916.48656152216 916.48601496793 81.377 1 0.09132188557038327 0.002585515171327528 0.011516857636590716 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF'] 7231 9496 ARDDTLITA True PC9_epitope_Rep5 974.50327421546 974.50216993586 41.482 2 0.091321579340489 0.002585515171327528 0.011516936258913348 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 57820 8187 LEESSPIAA True H1975_Epitope_Rep1 915.4549270407099 915.4543749679301 36.432 1 0.09132073103037106 0.002585515171327528 0.011517154059090467 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 82963 23369 PSESLILFL True PC9_epitope_Rep1 1017.5746482505699 1017.57354993586 94.668 2 0.09132067762507058 0.002585515171327528 0.01151716777081504 ['ENST00000293778.10_2_17:4636851-4637124:-|nuORF'] 8606 3365 ATYHGSFSTK True NCI_RA007_Epitope_Rep4 1097.51417325233 1097.5130699358601 18.763 2 0.0913094573606394 0.002585515171327528 0.011520048898658302 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'ENST00000491769.1_1_2:238233419-238250825:-|nuORF', 'ENST00000493608.1_1_2:238242084-238243404:-|nuORF'] 65934 14629 LSDSFSDLY True H1975_Epitope_Rep3 1045.46040634397 1045.4598749679299 61.639 1 0.09130104664549907 0.002585515171327528 0.011522209041235139 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 115591 6507 TRTGSSFSV True PC9_epitope_Rep2 940.4614094034799 940.46030993586 30.442 2 0.09129841646353488 0.002585515171327528 0.011522884635472077 ['ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484975.5_1_20:44472824-44477348:-|nuORF', 'ENST00000493118.5_1_20:44472824-44485929:-|nuORF'] 25375 9691 FEAPATINSA True H1975_Epitope_Rep1 1019.49237517859 1019.49187496793 42.201 1 0.09128735715924324 0.002585515171327528 0.011525725763124092 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 114876 21304 TQRGALFLLF True PC9_epitope_Rep4 1164.6655289436399 1164.6644299358602 90.113 2 0.09128092691305208 0.002585515171327528 0.011527377994130271 ['ENST00000481988.1_1_X:99901319-99905990:+|nuORF', 'ENSG00000102359|ENST00000373004|SRPX2'] 85451 15244 QEYVTFLGA True H1975_Epitope_Rep2 1026.5022115862998 1026.50110993586 63.794 2 0.091274070842942 0.002585515171327528 0.011529139886453847 ['ENSG00000197956|ENST00000368719|S100A6'] 121701 12060 VFLENVIR True NCI_RA007_Epitope_Rep4 988.5705659296399 988.56946993586 53.388 2 0.09127372006396024 0.002585515171327528 0.011529230037492469 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 14954 12802 DYFEEYGK True PC9_epitope_Rep4 1049.4341915961297 1049.4330899358602 57.103 2 0.09126777291732535 0.002585515171327528 0.011530758570098509 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 127674 10025 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 43.887 2 0.09126527613169666 0.002585515171327528 0.011531400349906134 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 116763 17141 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54370993586 71.564 2 0.09126457153582801 0.002585515171327528 0.01153158146705373 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 87525 13232 QQIGNAKISL True PC9_epitope_Rep1 1070.6084079903399 1070.60730993586 55.762 2 0.09126427229095403 0.002585515171327528 0.01153165838909522 ['ENSG00000100625|ENST00000216513|SIX4'] 128493 16366 VPSPGLPVSA True PC9_epitope_Rep2 922.5123823471799 922.51128993586 68.196 2 0.09125763591131998 0.002585515171327528 0.011533364420877927 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 107920 8586 SVVSSTEKL True PC9_epitope_Rep5 948.51277627 948.51166993586 37.967 2 0.0912558865934745 0.002585515171327528 0.011533814162504768 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 71958 13307 MESPFITSP True H1975_Epitope_Rep3 1007.46338354943 1007.46287496793 56.443 1 0.09123678624378957 0.002585515171327528 0.01153872585664776 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 23841 23343 EYINFLENL True PC9_epitope_Rep3 1153.5655401188499 1153.56444993586 95.068 2 0.09123151550397433 0.002585515171327528 0.011540081587114746 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 96183 10688 RYPDSHQLF True PC9_epitope_Rep2 1161.55670677065 1161.5550749037902 46.424 3 0.0912165337669629 0.002585515171327528 0.011543935987611359 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 21655 17224 ERSDTFINL True PC9_epitope_Rep2 1093.54038800017 1093.53928993586 71.513 2 0.09120719109679924 0.002585515171327528 0.011546340224458992 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 98241 15028 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48546993586 62.958 2 0.09119754669447076 0.002585515171327528 0.011548822606574156 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 87749 6638 QRATSNVF True PC9_epitope_Rep5 921.4668291370899 921.4657299358599 30.506 2 0.09119707953734371 0.002585515171327528 0.011548942861442571 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 25389 15357 FEDDAIQLV True H1975_Epitope_Rep1 1048.50769088956 1048.50717496793 64.34 1 0.09119038102103594 0.002585515171327528 0.011550667313685814 ['ENSG00000085840|ENST00000371568|ORC1'] 90060 5361 READGILKP True NCI_RA007_Epitope_Rep4 997.5556441414899 997.55454993586 27.188 2 0.09118653200473556 0.002585515171327528 0.0115516583068894 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 96647 8625 SAINEVVTR True PC9_epitope_Rep1 987.53490869691 987.53380993586 38.014 2 0.0911854845390371 0.002585515171327528 0.011551928008283746 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 6733 20135 AQAQEVFFL True PC9_epitope_Rep6 1051.53384606775 1051.53274993586 90.121 2 0.09118134534850171 0.002585515171327528 0.01155299382514638 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 109015 21366 TAIDILTTC True PC9_epitope_Rep1 949.4790336135701 949.4784849679301 87.016 1 0.09117692246466536 0.002585515171327528 0.011554132794316406 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 96230 13496 RYQDAIRVF True PC9_epitope_Rep2 1166.6196413803798 1166.61799490379 57.199 3 0.09117210235966575 0.002585515171327528 0.01155537417597246 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 9441 19828 AVVEFLTSV True PC9_epitope_Rep6 963.5276980581499 963.52660993586 88.929 2 0.09116874243494372 0.002585515171327528 0.011556239573969599 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 139202 13963 YLETVAAYY True H1975_Epitope_Rep2 1091.51752729727 1091.5169749679299 58.856 1 0.09116801209606759 0.002585515171327528 0.011556427691606775 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 38064 12065 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.44900993586 51.268 2 0.09115566889125581 0.002585515171327528 0.011559607441691426 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 46969 9788 ITPQTIHGV True PC9_epitope_Rep1 964.5341804209198 964.53308993586 42.511 2 0.0911503524152708 0.002585515171327528 0.011560977281847138 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 1569 6674 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43364496793 30.581 1 0.09114735482464455 0.002585515171327528 0.011561749707138263 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 6689 9443 AQAEVYKEL True PC9_epitope_Rep4 1049.53932537101 1049.53822993586 43.934 2 0.0911433262820439 0.002585515171327528 0.011562787867263693 ['ENSG00000169710|ENST00000306749|FASN'] 2756 8711 AETLAPVQA True H1975_Epitope_Rep2 898.47599683846 898.47544496793 38.467 1 0.09114306964963861 0.002585515171327528 0.011562854004726234 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1', 'WWTR1|p.M267I|1|0.44|ENSG00000018408|chr3:149527940-149527940|C/A|missense_variant', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 69662 7673 LVDSNNPKI True PC9_epitope_Rep5 998.53965972418 998.53856993586 34.458 2 0.09114281832253222 0.002585515171327528 0.0115629187752926 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 91831 4033 RKKHLEDEL True NCI_RA007_Epitope_Rep4 1166.64077074778 1166.6391149037902 21.772 3 0.09114197347863005 0.002585515171327528 0.011563136506090515 ['ENSG00000117862|ENST00000371626|TXNDC12'] 14424 12546 DTDSINLY True H1975_Epitope_Rep2 939.4185415319901 939.41744993586 53.353 2 0.09113611488450025 0.002585515171327528 0.011564646473392007 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 29685 22900 FVLPELPSV True PC9_epitope_Rep1 999.56408356687 999.5635749679301 92.882 1 0.09113566464181683 0.002585515171327528 0.011564762524615857 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 103271 11177 SPLLLQAKA True PC9_epitope_Rep4 939.5753169569099 939.57420993586 50.772 2 0.0911342708406177 0.002585515171327528 0.011565121787498814 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 107329 20468 SVLGAITSV True PC9_epitope_Rep2 845.48583324617 845.48528496793 84.159 1 0.09112605942971101 0.0026117409627826912 0.011567238555922552 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 90073 5356 REAEFTKSIA True NCI_RA007_Epitope_Rep1 1150.59823722946 1150.5971499358602 24.911 2 0.09112366921855893 0.0026117409627826912 0.011567854782529136 ['ENSG00000118363|ENST00000263672|SPCS2'] 76572 22112 NQLDSLMGL True PC9_epitope_Rep5 989.48518162317 989.48408993586 90.088 2 0.09112349002097539 0.0026117409627826912 0.011567900983181544 ['ENSG00000135148|ENST00000412615|TRAFD1'] 104292 21045 SQIISLQTL True PC9_epitope_Rep3 1001.5757108797301 1001.5746099358599 86.229 2 0.09111521975093126 0.0026117409627826912 0.0115700334112762 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 75064 12357 NHTVLPEAL True PC9_epitope_Rep6 992.5290950404799 992.52798993586 58.933 2 0.091103719420859 0.0026117409627826912 0.011572999305566262 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 71753 5069 MEERAQLEA True H1975_Epitope_Rep1 1075.4968089360298 1075.49570993586 24.569 2 0.09109704875739454 0.0026117409627826912 0.011574719976067679 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2'] 85938 16997 QHIDFVTAI True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 77.929 2 0.09109474345248149 0.0026117409627826912 0.01157531467644666 ['IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 58573 11915 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.5913299358601 50.832 2 0.09109374887942068 0.0026117409627826912 0.011575571255773754 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 11776 10226 DHDITSQL True PC9_epitope_Rep4 927.42977492203 927.42866993586 47.012 2 0.09109288951981728 0.0026117409627826912 0.01157579295715836 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 26896 21643 FLDGNELTL True PC9_epitope_Rep3 1020.51277627 1020.51166993586 88.548 2 0.09108444591573812 0.0026117409627826912 0.011577971489383318 ['ENSG00000213719|ENST00000375784|CLIC1'] 23899 11375 EYKNTNEMF True PC9_epitope_Rep1 1174.49647458286 1174.49536993586 48.635 2 0.09108351376322756 0.0026117409627826912 0.01157821201763238 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 125054 9272 VIDQQNGLY True H1975_Epitope_Rep1 1048.5189242795998 1048.51837496793 40.577 1 0.09107583935837285 0.0026117409627826912 0.011580192464907907 ['ENSG00000132383|ENST00000254719|RPA1'] 31312 18720 GDLENAFLNL True H1975_Epitope_Rep3 1104.54513902744 1104.5440499358601 78.503 2 0.09107366070698553 0.0026117409627826912 0.011580754743434655 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 101291 17974 SLIGHLQTL True PC9_epitope_Rep2 980.5654805492001 980.56438993586 74.44 2 0.09107226535220264 0.0026117409627826912 0.011581114877984251 ['DUSP5|p.S336C|1|0.22|ENSG00000138166|chr10:110510278-110510278|C/G|missense_variant', 'ENSG00000138166|ENST00000369583|DUSP5'] 27910 21336 FQEEDFPAL True PC9_epitope_Rep1 1094.4920408254197 1094.49147496793 86.899 1 0.0910703354878431 0.0026117409627826912 0.011581612984444099 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 6120 14405 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 60.674 2 0.09106868651959729 0.0026117409627826912 0.011582038606465315 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 93539 11009 RQLETLGQEKL True PC9_epitope_Rep3 1313.7303140281695 1313.72866490379 47.337 3 0.09105921017857316 0.0026117409627826912 0.011584484871389703 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 93495 6762 RQKGLVEDTL True NCI_RA007_Epitope_Rep4 1157.6404363946099 1157.6393299358601 32.629 2 0.09105416217544084 0.0026117409627826912 0.011585788185253035 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 6348 7300 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 32.893 2 0.09104390561923513 0.0026117409627826912 0.011588436692299038 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 6273 4413 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 23.422 2 0.09104083290595048 0.0026117409627826912 0.011589230257686324 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 111201 13007 THISDTSVVL True PC9_epitope_Rep2 1070.56078909158 1070.5596899358602 55.317 2 0.0910341285506894 0.0026117409627826912 0.011590961917280334 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 113217 9825 TLQKEGVIGV True PC9_epitope_Rep6 1042.6022599807397 1042.60116993586 48.255 2 0.09101943699020627 0.0026117409627826912 0.0115947574393809 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 98371 7879 SEYMNNKEALP True H1975_Epitope_Rep2 1294.58635221642 1294.58524993586 35.253 2 0.09101457366276756 0.0026117409627826912 0.011596014125320592 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000515592.1_1_5:140041093-140041799:+|nuORF'] 133716 19454 VYDPATETW True PC9_epitope_Rep3 1080.4763907612798 1080.47528993586 80.057 2 0.09098995261268425 0.0026117409627826912 0.011602378195916946 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 114802 18962 TQLGPPYHIL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 77.961 2 0.09098706808082167 0.0026117409627826912 0.011603124008738648 ['ENSG00000119616|ENST00000341162|FCF1'] 115136 9582 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 47.16 2 0.09098483501697192 0.0026117409627826912 0.011603701411831098 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 121849 15410 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 64.555 2 0.09098378366124849 0.0026117409627826912 0.011603973270198218 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 87556 13626 QQLEPVTGQV True PC9_epitope_Rep2 1097.57168812845 1097.5705899358602 57.704 2 0.0909832647700866 0.0026117409627826912 0.01160410744670852 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 2126 11940 AELNAQIITA True H1975_Epitope_Rep1 1042.56587447202 1042.56537496793 50.931 1 0.09097955274470026 0.0026117409627826912 0.011605067356787287 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 90473 8685 RELDPSLVSA True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 38.337 2 0.09096718444428853 0.0026117409627826912 0.011608266276596054 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 140106 8706 YQNENEVGV True PC9_epitope_Rep4 1050.4618033262998 1050.4607099358602 40.982 2 0.09096392431571829 0.0026117409627826912 0.01160910961076154 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF', 'AKR1B1|p.V48M|1|0.32|ENSG00000085662|chr7:134451678-134451678|C/T|missense_variant'] 77223 7549 NRVGDEGAQAL True PC9_epitope_Rep5 1128.5523496662 1128.5512499358601 33.987 2 0.09095929746461198 0.0026117409627826912 0.011610306590073961 ['ENSG00000167207|ENST00000647318|NOD2', 'nc|ENSG00000167207|Q9HC29|NOD2'] 108632 8685 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59198993586 38.771 2 0.09095217522002835 0.0026117409627826912 0.011612149363159446 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 87725 13433 QRALLANAL True PC9_epitope_Rep2 968.5767139392399 968.57560993586 56.952 2 0.09095157095353489 0.0026117409627826912 0.011612305720727443 ['ENSG00000109133|ENST00000504986|TMEM33'] 77998 20126 NVPEGLLATV True PC9_epitope_Rep4 1011.56006081559 1011.55896993586 85.549 2 0.0909407850458366 0.0026117409627826912 0.011615096974374732 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 32001 5994 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 28.069 2 0.09093970366933517 0.0026117409627826912 0.011615376855703697 ['ENSG00000108344|ENST00000264639|PSMD3'] 72297 11152 MIDPSGVSY True H1975_Epitope_Rep3 967.4320834211501 967.43098993586 47.991 2 0.09093439286786006 0.0026117409627826912 0.011616751487440125 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 115415 19341 TRLPEFSEL True PC9_epitope_Rep5 1090.56587447202 1090.56537496793 79.439 1 0.09093107109549017 0.0026117409627826912 0.011617611363258513 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 31878 10810 GELLFVHSA True H1975_Epitope_Rep3 971.50763131991 971.50652993586 46.659 2 0.09092869677148263 0.0026117409627826912 0.011618226019024078 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 32963 10105 GIDSSSPEV True PC9_epitope_Rep5 889.4028914678499 889.40234496793 43.853 1 0.09092507227709226 0.0026117409627826912 0.011619164373443564 ['ENSG00000169564|ENST00000303577|PCBP1'] 32003 5482 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 26.139 1 0.09092460876353929 0.0026117409627826912 0.011619284378804226 ['ENSG00000108344|ENST00000264639|PSMD3'] 78458 23034 NYMEVVSLL True PC9_epitope_Rep3 1066.53688284286 1066.53578993586 93.869 2 0.09092379239882672 0.0026117409627826912 0.011619495741480646 ['ENSG00000115159|ENST00000438166|GPD2', 'nc|ENSG00000115159|P43304-2|GPD2'] 76607 19673 NQPGVLIQV True PC9_epitope_Rep1 966.5498304850599 966.54928496793 80.497 1 0.09091481222662813 0.0026117409627826912 0.0116218210128431 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 76818 4727 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 25.591 2 0.09091097850522202 0.0026117409627826912 0.011622813827681247 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 59780 10150 LGEHNIDVLEG True NCI_RA007_Epitope_Rep4 1194.5880664685799 1194.58696993586 45.9 2 0.090909878528339 0.0026117409627826912 0.011623098702381087 ['CON__P00761'] 14632 14089 DVDLEFLAK True H1975_Epitope_Rep3 1048.54407639828 1048.5429699358601 59.52 2 0.09090571567249868 0.00263586554124093 0.011624176868836069 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 117278 10380 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep1 1134.59546072858 1134.5943699358602 44.81 2 0.0909024622195017 0.00263586554124093 0.011625019568793658 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 111542 7237 TIAPALVSK True NCI_RA007_Epitope_Rep1 898.5487678559 898.54766993586 32.141 2 0.09090205736025417 0.00263586554124093 0.011625124438310212 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 107156 21684 SVIEQIVYV True PC9_epitope_Rep1 1048.580461907 1048.57936993586 88.235 2 0.09089148746201484 0.00263586554124093 0.011627862645518726 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 134811 21784 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep1 1230.58422733854 1230.5831299358601 88.622 2 0.09087976812365314 0.00263586554124093 0.011630899337567113 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 118162 23520 TYIQILESF True PC9_epitope_Rep1 1112.57537652656 1112.57426993586 95.256 2 0.09087916972388466 0.00263586554124093 0.011631054413901878 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM', 'FANCM|p.D696Tfs*8|1|0.16|ENSG00000187790|chr14:45170670-45170670|G/-|frameshift_variant'] 9041 11365 AVHETLVAV True PC9_epitope_Rep2 937.5232813840498 937.52218993586 49.038 2 0.09087022470735687 0.00263586554124093 0.011633372763875037 ['ENSG00000141873|ENST00000269740|SLC39A3'] 41824 19139 IAVERVISV True PC9_epitope_Rep4 984.59678067748 984.59568993586 81.713 2 0.090866332237054 0.00263586554124093 0.011634381742557445 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210', 'KIAA1210|p.A1218Hfs*41|1|0.33|ENSG00000250423|chrX:119087578-119087578|C/-|frameshift_variant'] 1839 11388 AEIDASNIV True H1975_Epitope_Rep3 930.46582607758 930.4652749679301 48.918 1 0.09085502051057504 0.00263586554124093 0.011637314358951633 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 55678 23437 LALFPGVAL True PC9_epitope_Rep1 899.5480395799099 899.54694993586 94.934 2 0.09083757096602023 0.00263586554124093 0.011641839605720945 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 90881 5009 REVQGFESA True NCI_RA007_Epitope_Rep3 1021.4828731240499 1021.48176993586 26.7 2 0.09083599380143645 0.00263586554124093 0.011642248699031436 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 78411 24030 NYLPFIMEL True PC9_epitope_Rep3 1138.57326835158 1138.57216993586 97.719 2 0.09083090095314031 0.00263586554124093 0.011643569801997895 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 90321 4564 REFDNPDTA True NCI_RA007_Epitope_Rep3 1063.45705229903 1063.4559499358602 24.832 2 0.09083079988962256 0.00263586554124093 0.011643596019670745 ['RCBTB2|p.K385N|1|0.19|ENSG00000136161|chr13:48501831-48501831|C/A|missense_variant', 'nc|ENSG00000136161|O95199-2|RCBTB2', 'ENSG00000136161|ENST00000344532|RCBTB2'] 110336 5335 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.4390649679301 25.575 1 0.09082673510713461 0.00263586554124093 0.011644650542850231 ['ENSG00000167470|ENST00000682408|MIDN'] 134748 18062 VYTSKSDVWSF True PC9_epitope_Rep4 1317.62411762413 1317.6230299358601 77.536 2 0.09082345730268519 0.00263586554124093 0.011645500966849161 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 137435 5228 YEDGARIEA True H1975_Epitope_Rep2 1022.4668887067398 1022.46578993586 25.177 2 0.09081035702402364 0.00263586554124093 0.011648900412121469 ['nc|ENSG00000247077|Q96HS1-2|PGAM5', 'ENSG00000247077|ENST00000498926|PGAM5'] 36802 18740 GVLDTLTKV True PC9_epitope_Rep4 944.55424715916 944.55314993586 80.167 2 0.0908094077036779 0.00263586554124093 0.01164914679168874 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 37862 20406 GYNVKFDMF True PC9_epitope_Rep5 1119.5059170677498 1119.50480993586 83.529 2 0.09080508137475872 0.00263586554124093 0.011650269677538105 ['ENST00000589115.5_1_19:1105440-1106426:+|nuORF', 'ENST00000588919.5_1_19:1105440-1106636:+|nuORF', 'nc|ENSG00000167468|P36969-2|GPX4', 'ENSG00000167468|ENST00000354171|GPX4'] 97348 5882 SEDEADVAP True H1975_Epitope_Rep2 931.3770706428298 931.3765249679301 27.611 1 0.09080501907969635 0.00263586554124093 0.011650285846785615 ['ENST00000444428.5_3_7:1040118-1094922:-|nuORF', 'ENST00000412051.5_2_7:1040118-1067924:-|nuORF'] 11770 11333 DHDITSQL True PC9_epitope_Rep1 927.42977492203 927.42866993586 48.472 2 0.09080299424942863 0.00263586554124093 0.011650811421390087 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 40134 8741 HPYPPGPGV True PC9_epitope_Rep3 919.4552018242299 919.45410993586 38.576 2 0.09080265072297311 0.00263586554124093 0.011650900590983998 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 88806 7804 QTVAVGVIK True PC9_epitope_Rep6 913.5596668927699 913.55856993586 39.408 2 0.09080157600005241 0.00263586554124093 0.011651179562338089 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 40053 8700 HPTENLIASA True PC9_epitope_Rep4 1051.52982331647 1051.5287299358602 40.959 2 0.09079449979616097 0.00263586554124093 0.011653016526938143 ['ENSG00000196981|ENST00000330689|WDR5B'] 52666 21292 KLVEFDFLGA True PC9_epitope_Rep2 1137.60701100801 1137.6059099358602 87.363 2 0.09078807344410637 0.00263586554124093 0.011654685029332004 ['ENSG00000013810|ENST00000313288|TACC3', 'TACC3|p.A598S|1|0.3|ENSG00000013810|chr4:1737284-1737284|G/T|missense_variant', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 101350 22065 SLITGQDLLSV True PC9_epitope_Rep3 1144.63395403184 1144.6328499358601 90.171 2 0.09078579898037352 0.00263586554124093 0.011655275612689558 ['ENSG00000100625|ENST00000216513|SIX4'] 21658 18123 ERSDTFINL True PC9_epitope_Rep3 1093.54038800017 1093.53928993586 74.908 2 0.09078204854687484 0.00263586554124093 0.011656249505734005 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 32767 10005 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.46030993586 43.462 2 0.09078201926120895 0.00263586554124093 0.01165625711078653 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 110943 12795 THAAQQILL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 54.236 2 0.09077932200474417 0.00263586554124093 0.011656957568383225 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 121233 5822 VETDHIVAA True H1975_Epitope_Rep3 953.4818104948898 953.48070993586 27.415 2 0.09077127379132802 0.00263586554124093 0.011659047866972777 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-5|AIFM1', 'nc|ENSG00000156709|O95831-2|AIFM1'] 96889 13908 SATQVYTIL True H1975_Epitope_Rep2 994.53351171458 994.53240993586 58.644 2 0.09076825625672785 0.00263586554124093 0.011659831678785483 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000481241.1_1_3:180491477-180491675:-|nuORF'] 118057 23061 TYFSTPLLL True PC9_epitope_Rep5 1053.57464825057 1053.57354993586 93.692 2 0.09076738206828742 0.00263586554124093 0.011660058760642309 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 57671 17660 LEEFITPIV True H1975_Epitope_Rep2 1059.58521293427 1059.58467496793 73.25 1 0.09075944535254617 0.00263586554124093 0.0116621206177984 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'ENST00000491510.1_1_3:25668659-25671642:-|nuORF', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 111260 18248 THLESLVEL True PC9_epitope_Rep4 1039.5549754351498 1039.5538699358601 78.261 2 0.09075231561390507 0.00263586554124093 0.011663973127069627 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 12031 15145 DHSIIETL True PC9_epitope_Rep6 926.47091145802 926.46980993586 70.321 2 0.09075140193093839 0.00263586554124093 0.011664210548086968 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 118613 15689 TYSHGNYLF True PC9_epitope_Rep1 1100.49270953176 1100.4916099358602 65.17 2 0.09075083129445102 0.00263586554124093 0.011664358830611515 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 1131 6319 AEAPPGVET True H1975_Epitope_Rep3 869.41306222873 869.4125149679301 29.3 1 0.09074793801435181 0.00263586554124093 0.0116651106902722 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 73161 8268 MRSPQMVSA True PC9_epitope_Rep5 1005.47357139365 1005.47246993586 36.744 2 0.0907462294474325 0.00263586554124093 0.011665554707051443 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 129218 6246 VQTEVNREL True PC9_epitope_Rep6 1086.56693710118 1086.5658499358601 32.515 2 0.0907400176841232 0.00263586554124093 0.01166716913466296 ['BLZF1|p.C212Qfs*12|1|0.06|ENSG00000117475|chr1:169378493-169378494|-/ACAAGCTCAAAGTAATATCACTAACTTTAAT|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 14618 16350 DVANKIGII True PC9_epitope_Rep2 941.5545815123298 941.55348993586 68.135 2 0.090735386403025 0.00263586554124093 0.011668372935103106 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF'] 127681 10404 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 44.959 2 0.09072884957470481 0.00263586554124093 0.011670072241150577 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 110303 7253 TESSQSFVA True H1975_Epitope_Rep2 954.4294405688598 954.4288949679301 32.833 1 0.0907267498356421 0.00263586554124093 0.011670618136532156 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'PJA2|p.Q111E|1|0.27|ENSG00000198961|chr5:109379156-109379156|G/C|missense_variant'] 97849 12051 SELPGAFEA True NCI_RA007_Epitope_Rep5 919.4287122928699 919.42816496793 53.012 1 0.09072538263196607 0.00263586554124093 0.011670973598543116 ['ENSG00000126247|ENST00000246533|CAPNS1'] 19454 6038 ELNITAAK True PC9_epitope_Rep6 858.4810822188999 858.47998993586 31.58 2 0.09072245573483667 0.00263586554124093 0.011671734602838643 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 74526 21168 NFLPPIIARF True PC9_epitope_Rep4 1186.6862643882198 1186.6851699358601 89.586 2 0.09072168958518693 0.00263586554124093 0.011671933812398663 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 90336 12745 REFEMWAP True NCI_RA007_Epitope_Rep4 1064.4749512926398 1064.47384993586 56.082 2 0.09072135076519092 0.00263586554124093 0.01167202191133486 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 7964 13060 ATDDITELY True H1975_Epitope_Rep1 1039.47097102767 1039.46986993586 55.321 2 0.09071504922928209 0.00263586554124093 0.011673660532157197 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 28485 16042 FSDVMEDLY True H1975_Epitope_Rep1 1117.4637774722498 1117.46327496793 67.043 1 0.09071255368872597 0.00263586554124093 0.011674309520638276 ['ENSG00000167325|ENST00000300738|RRM1'] 132754 20911 VVINFDFPKL True PC9_epitope_Rep4 1190.6699456177398 1190.6688499358602 88.594 2 0.09071050621968688 0.00263586554124093 0.011674842009481436 ['ENSG00000110367|ENST00000534980|DDX6'] 35085 11052 GQVLVQNAL True NCI_RA007_Epitope_Rep5 940.5341804209199 940.53308993586 49.145 2 0.09070544150425841 0.00263586554124093 0.011676159297681317 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 85724 13088 QHAVEAISL True PC9_epitope_Rep1 966.5134449763399 966.51234993586 55.211 2 0.09067696674108444 0.00263586554124093 0.01168356795540064 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 84202 21886 PYLDSFYEY True PC9_epitope_Rep1 1195.5073565363898 1195.50677496793 88.997 1 0.09067635412420011 0.00263586554124093 0.011683727396990914 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 47575 13617 IVVGRITEV True PC9_epitope_Rep2 984.5967806774798 984.59568993586 57.67 2 0.09067320323111884 0.00263586554124093 0.011684547490854645 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 8395 7601 ATLQEALAH True NCI_RA007_Epitope_Rep5 952.4977949121999 952.49668993586 35.934 2 0.09067312930455414 0.00263586554124093 0.011684566732632391 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 43488 16271 IGLFGGAGVGK True PC9_epitope_Rep1 974.5549158654998 974.55380993586 67.405 2 0.09067209559143001 0.00263586554124093 0.011684835793025669 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 39494 6355 HLDTLTEHY True H1975_Epitope_Rep2 1127.52473793603 1127.52364993586 29.372 2 0.0906591837906168 0.00263586554124093 0.011688197040155869 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 1969 11847 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 50.568 1 0.09065749685200333 0.00263586554124093 0.011688636257801 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 21765 6639 ERVDSANAL True PC9_epitope_Rep1 973.4828731240499 973.48176993586 30.342 2 0.09064233033296198 0.00263586554124093 0.0116925857714385 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 24369 18926 FAADIISVL True H1975_Epitope_Rep2 947.53278343859 947.53168993586 78.566 2 0.09063586784739773 0.00263586554124093 0.011694269051435816 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 71208 14605 LYPEGLAQL True NCI_RA007_Epitope_Rep3 1002.5385970950199 1002.53750993586 64.791 2 0.09063194009168823 0.00263586554124093 0.011695292223887073 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 8052 6345 ATDPTIHTV True PC9_epitope_Rep4 953.4818104948899 953.48070993586 31.483 2 0.09062417794753923 0.00263586554124093 0.011697314496123276 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 72299 10302 MIDVTKSYY True H1975_Epitope_Rep3 1118.5317974624202 1118.5307099358602 44.68 2 0.09062135470820146 0.00263586554124093 0.011698050117088228 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5'] 49028 4889 KEFPSQASP True NCI_RA007_Epitope_Rep4 989.4818104948898 989.48070993586 25.256 2 0.09059008520308769 0.00263586554124093 0.011706200604344793 ['ENSG00000138641|ENST00000402738|HERC3', 'ENST00000506714.5_1_4:89300148-89319290:+|nuORF', 'nc|ENSG00000138642|Q8IVU3-3|HERC6', 'nc|ENSG00000287542|Q15034-2|HERC3', 'nc|ENSG00000138642|Q8IVU3-2|HERC6', 'ENSG00000138642|ENST00000264346|HERC6'] 29733 20620 FVNDIFERI True PC9_epitope_Rep2 1151.59750895347 1151.59640993586 84.748 2 0.09057732710067 0.00263586554124093 0.011709527585154861 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 106638 5574 STSNSFNLK True NCI_RA007_Epitope_Rep4 996.48762415132 996.48652993586 28.04 2 0.09056448362700543 0.00263586554124093 0.011712877732940538 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 62746 15844 LLLPGELAK True PC9_epitope_Rep4 952.5957180483199 952.59462993586 68.867 2 0.09056187536557632 0.00263586554124093 0.011713558194115565 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 22185 19610 ESVAILPQL True PC9_epitope_Rep4 968.55424715916 968.55314993586 83.553 2 0.09055635542898641 0.00263586554124093 0.011714998396568243 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 45476 19976 IQLPSVNTV True PC9_epitope_Rep5 969.54949613189 969.54838993586 81.89 2 0.09055134031597158 0.00263586554124093 0.011716307031260819 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292'] 141765 11297 YVADLVHSA True PC9_epitope_Rep2 973.4868958753299 973.48578993586 48.777 2 0.09053850128508142 0.00263586554124093 0.01171965785602385 ['ENSG00000179820|ENST00000391770|MYADM'] 92284 21678 RLLDVLAPL True PC9_epitope_Rep1 1008.6331661861999 1008.63206993586 88.212 2 0.0905377873799717 0.00263586554124093 0.011719844202862218 ['ENSG00000182871|ENST00000651438|COL18A1'] 143 15362 AADEVLAVL True NCI_RA007_Epitope_Rep3 899.4963979298699 899.49530993586 67.985 2 0.09053665112836211 0.00263586554124093 0.011720140798338432 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'nc|ENSG00000144028|O75643-2|SNRNP200'] 122559 6049 VGFAEAAR True PC9_epitope_Rep2 819.4239016959499 819.42280993586 28.66 2 0.09053517439644473 0.00263586554124093 0.011720526279926225 ['ENSG00000117984|ENST00000236671|CTSD'] 131571 20826 VTLGPVPEI True PC9_epitope_Rep2 923.53278343859 923.53168993586 85.551 2 0.09052714270419203 0.0026627218934911242 0.011722623058554843 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 58616 10393 LEQVGQGIVA True H1975_Epitope_Rep3 1012.5553097883198 1012.55477496793 45.033 1 0.09051733955868593 0.0026627218934911242 0.011725182779633473 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B'] 77603 6531 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.4608649679301 30.033 1 0.09051504399939171 0.0026627218934911242 0.011725782254686517 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 107188 23214 SVINFLDQL True PC9_epitope_Rep2 1047.5600608155898 1047.5589699358602 94.774 2 0.09051113691469034 0.0026627218934911242 0.011726802639132897 ['ENSG00000196976|ENST00000357360|LAGE3'] 6517 6186 APTGDLPRA True PC9_epitope_Rep2 896.4715801643599 896.47048993586 29.184 2 0.09050857402205613 0.0026627218934911242 0.011727472016531626 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 29161 20088 FTQDSNYLL True PC9_epitope_Rep3 1099.51858992643 1099.51748993586 82.521 2 0.09048832762272138 0.0026627218934911242 0.011732761251757864 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 131045 10854 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.4816749679298 46.708 1 0.0904870861220342 0.0026627218934911242 0.011733085658924468 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 103034 12394 SPFRVNVGA True PC9_epitope_Rep5 945.5032146458099 945.50210993586 52.67 2 0.09048568508415086 0.0026627218934911242 0.011733451763750955 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 37501 21364 GVVDIFQTV True PC9_epitope_Rep4 976.52294703088 976.52184993586 90.344 2 0.0904851703719864 0.0026627218934911242 0.011733586265762774 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 54305 20822 KYAMMFAEL True PC9_epitope_Rep1 1102.51912460374 1102.51802993586 84.921 2 0.09048004579683457 0.0026627218934911242 0.01173492547376919 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 137734 8229 YENEVALR True PC9_epitope_Rep3 992.4927095317598 992.49160993586 36.632 2 0.090478749479865 0.0026627218934911242 0.011735264263921283 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 17616 7789 EHINSVSAM True PC9_epitope_Rep3 986.44913046762 986.44802993586 34.955 2 0.09046842020741466 0.0026627218934911242 0.011737964131961307 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 77082 7660 NRLENDGATAL True PC9_epitope_Rep6 1172.5785644140399 1172.57746993586 38.786 2 0.0904609526417255 0.0026627218934911242 0.011739916372584645 ['ENSG00000100401|ENST00000356244|RANGAP1'] 43662 20940 IHDGFGFML True PC9_epitope_Rep2 1035.48478770035 1035.4836899358602 85.993 2 0.09046033423027704 0.0026627218934911242 0.011740078057252384 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 7896 6764 ATAIGMPVEK True NCI_RA007_Epitope_Rep3 1015.5372171960299 1015.5361099358599 33.7 2 0.0904555318104922 0.0026627218934911242 0.01174133372939073 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 94918 10083 RTFEKIEEV True PC9_epitope_Rep1 1149.60298825673 1149.60133490379 43.654 3 0.09045215732604758 0.0026627218934911242 0.011742216120266321 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 11906 19081 DHLLSVSL True PC9_epitope_Rep2 882.4810822189 882.47998993586 78.759 2 0.09045146269887848 0.0026627218934911242 0.011742397765486865 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 109098 16165 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.5744349679301 70.12 1 0.0904465809137547 0.0026627218934911242 0.01174367442886793 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 141967 18187 YVIELQHVV True PC9_epitope_Rep4 1098.60734536118 1098.6062499358602 78.023 2 0.09044399655349104 0.0026627218934911242 0.011744350332813106 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000494984.5_1_3:49135981-49136101:-|nuORF'] 5643 10022 APAAATVAV True PC9_epitope_Rep2 769.4334037504899 769.43230993586 43.875 2 0.09044276734529798 0.0026627218934911242 0.01174467182826513 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 54894 7054 KYPNVFKKI True NCI_RA007_Epitope_Rep4 1135.67536535135 1135.67371490379 33.757 3 0.0904402970525219 0.0026627218934911242 0.011745317950600569 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 14115 15199 DSDAPLFY True H1975_Epitope_Rep1 926.4021631918599 926.4016149679301 63.726 1 0.09043622229299837 0.0026627218934911242 0.011746383805967285 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 36017 19176 GTYDIFYTA True PC9_epitope_Rep6 1049.47057710485 1049.47007496793 86.413 1 0.09043531394007376 0.0026627218934911242 0.011746621420898258 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 134007 8945 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5287299358602 39.764 2 0.0904308139719242 0.0026627218934911242 0.011747798629183575 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 64762 12181 LQAEIEGLK True PC9_epitope_Rep3 999.5600608155898 999.55896993586 51.89 2 0.090410450330279 0.0026627218934911242 0.011753127229607334 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'KRT8|p.G326V|1|0.47|ENSG00000170421|chr12:52899779-52899779|C/A|missense_variant', 'CON__H-INV:HIT000292931'] 47881 12992 IYIDRGVVF True NCI_RA007_Epitope_Rep4 1080.59678067748 1080.59568993586 57.073 2 0.0904038008828212 0.0026627218934911242 0.011754867701199725 ['ENSG00000100109|ENST00000407690|TFIP11', 'nc|ENSG00000100109|Q9UBB9-2|TFIP11'] 28187 19712 FREDMPSIL True PC9_epitope_Rep3 1106.5430308524599 1106.54192993586 81.051 2 0.09040240522122425 0.0026627218934911242 0.011755233042139166 ['ENSG00000125676|ENST00000245838|THOC2'] 132179 11108 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 49.603 2 0.09040104584165398 0.0026627218934911242 0.011755588895903585 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 110293 6928 TESQALVSA True H1975_Epitope_Rep2 904.4501760134399 904.44906993586 31.569 2 0.09039987954443371 0.0026627218934911242 0.011755894213355432 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 87877 15530 QRIDEFEAM True PC9_epitope_Rep1 1137.5124590001699 1137.51136993586 64.56 2 0.09039553452375158 0.0026627218934911242 0.011757031734474151 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 140250 10518 YRAPEAEL True PC9_epitope_Rep1 947.4712458111899 947.47014993586 45.348 2 0.0903950569178812 0.0026627218934911242 0.011757156777465578 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1', 'nc|ENSG00000152332|Q8TAS1-2|UHMK1', 'ENSG00000152332|ENST00000489294|UHMK1'] 116782 13046 TVDSYVISY True H1975_Epitope_Rep2 1045.49679185269 1045.4956899358601 55.303 2 0.09039137236155932 0.0026627218934911242 0.011758121481185277 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 17382 13013 EHDPHVLLAV True PC9_epitope_Rep2 1128.5927579262 1128.59110490379 55.339 3 0.09038761664030863 0.0026627218934911242 0.011759104894688148 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 76553 3965 NQKDPGVLDR True NCI_RA007_Epitope_Rep1 1140.58873517492 1140.5870849037901 19.464 3 0.09038263430123228 0.0026627218934911242 0.011760409611021242 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 98033 5408 SEQHIPVSA True NCI_RA007_Epitope_Rep4 966.4770594676199 966.47596993586 27.373 2 0.09037712219674861 0.0026627218934911242 0.011761853215774005 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 2560 6879 AEQRIGPLA True H1975_Epitope_Rep2 953.5294293936498 953.52832993586 31.38 2 0.09036948860921198 0.002683890756798207 0.011763852708056556 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 48875 9120 KEAIETIVAA True H1975_Epitope_Rep3 1043.5862755634298 1043.5857749679299 40.069 1 0.09035861648482624 0.002683890756798207 0.011766701037183573 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 8352 18036 ATLEKVIEI True PC9_epitope_Rep5 1014.5961119711399 1014.59500993586 74.391 2 0.09034025688650817 0.002683890756798207 0.011771512451429442 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 86101 10733 QHTPTSITL True PC9_epitope_Rep2 996.52400966004 996.52290993586 46.603 2 0.09034025217391345 0.002683890756798207 0.011771513686676222 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 140983 15588 YSHDGAFLAV True PC9_epitope_Rep2 1078.5083595959 1078.5072699358602 65.236 2 0.09033649946814994 0.002683890756798207 0.011772497370094026 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 26452 18441 FIDDANYSV True PC9_epitope_Rep5 1042.4607406971402 1042.4596499358602 75.954 2 0.09033083442520785 0.002683890756798207 0.011773982475066913 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 141810 16190 YVDDGLISL True H1975_Epitope_Rep1 993.5018772331299 993.50132496793 67.622 1 0.09032981401186992 0.002683890756798207 0.011774249997789107 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 34125 21255 GMPDFLEKL True PC9_epitope_Rep5 1048.52631815916 1048.5252299358601 86.808 2 0.09032932048704809 0.002683890756798207 0.011774379387719313 ['ENSG00000084090|ENST00000337288|STARD7'] 2282 7755 AENVAVPEA True NCI_RA007_Epitope_Rep4 898.4396113297399 898.4390649679301 36.507 1 0.09031786223574685 0.002683890756798207 0.011777383834601512 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 48199 21185 IYPTTYVQF True PC9_epitope_Rep1 1130.56481184286 1130.56427496793 86.323 1 0.09031729862272787 0.002683890756798207 0.011777531637254984 ['ENSG00000179820|ENST00000391770|MYADM'] 30124 15483 FYMDTSHLF True NCI_RA007_Epitope_Rep5 1159.5008316873098 1159.4997299358602 66.251 2 0.09031616556996723 0.002683890756798207 0.01177782877588317 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 118895 10081 VADGYPVRL True NCI_RA007_Epitope_Rep1 988.5341804209199 988.53308993586 43.222 2 0.09030447327181032 0.002683890756798207 0.011780895449580471 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 111234 11385 THITAQTAVL True PC9_epitope_Rep5 1053.58185888933 1053.5807699358602 48.791 2 0.09028774482110173 0.002683890756798207 0.011785284327446147 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 7382 5920 ARSTDQTVL True PC9_epitope_Rep3 989.51417325233 989.51306993586 27.833 2 0.09027591751969954 0.002683890756798207 0.011788388273309835 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 9190 8090 AVLSSPLSH True NCI_RA007_Epitope_Rep5 909.49198125577 909.49088993586 37.806 2 0.09027021894358156 0.002683890756798207 0.01178988407851765 ['ENSG00000110799|ENST00000261405|VWF', 'VWF|p.N911Ifs*9|1|0.28|ENSG00000110799|chr12:6031534-6031534|C/-|frameshift_variant'] 115146 18389 TRDEYLSLVA True PC9_epitope_Rep3 1165.59790287629 1165.5968099358602 75.941 2 0.0902653094220113 0.002683890756798207 0.011791172910816381 ['ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 32880 9176 GHSGDVMSL True PC9_epitope_Rep4 901.3963666187701 901.39526993586 42.89 2 0.09026433432799735 0.002683890756798207 0.011791428905332224 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 99316 20050 SHSFVVNIL True PC9_epitope_Rep5 1014.5498304850599 1014.54872993586 82.176 2 0.09026389334555984 0.002683890756798207 0.011791544679574145 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 121848 16683 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 68.999 2 0.0902634383550341 0.002683890756798207 0.011791664132586536 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 6146 12798 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 54.528 2 0.09026204788204521 0.002683890756798207 0.011792029193852837 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 63085 18138 LLQNNLPAV True PC9_epitope_Rep4 980.5654805492 980.56438993586 77.832 2 0.09025735958283955 0.002683890756798207 0.011793260160655213 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 92111 9349 RLASTLVHL True NCI_RA007_Epitope_Rep4 1008.6080140675199 1008.60690993586 42.815 2 0.09025570444046707 0.002683890756798207 0.0117936947663465 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 103698 5240 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 26.856 2 0.09025550444184607 0.002683890756798207 0.0117937472828186 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 115824 8516 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41837496793 37.742 1 0.09024944224583517 0.002683890756798207 0.011795339224585814 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 5554 18672 AM[Oxidation]SSKFFLV True PC9_epitope_Rep5 1044.53140392004 1044.53030993586 76.843 2 0.09023972355390311 0.002683890756798207 0.011797891792125708 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 6143 12357 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 52.841 2 0.0902380410797086 0.002683890756798207 0.011798333738947826 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 27097 17992 FLGYPITL True H1975_Epitope_Rep2 922.5164050984599 922.5158549679301 74.535 1 0.09023746229432977 0.002683890756798207 0.01179848577602213 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 35838 7508 GTLMWHQMK True NCI_RA007_Epitope_Rep4 1130.5365060033798 1130.53486490379 35.524 3 0.09022729197989593 0.002683890756798207 0.011801157647267418 ['ENST00000352767.7_2_3:184032446-184033585:+|nuORF', 'ENST00000346169.6_1_3:184032401-184033585:+|nuORF'] 104308 11658 SQIPAQPSV True PC9_epitope_Rep2 925.48689587533 925.4863449679301 50.174 1 0.09022692314116394 0.002683890756798207 0.011801254556665728 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 108425 22624 SYLPFTEAF True PC9_epitope_Rep2 1073.5069626135698 1073.50637496793 92.518 1 0.09022442110894055 0.002683890756798207 0.011801911965315135 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 60798 17628 LHSLPIVSM True PC9_epitope_Rep4 995.54738795691 995.54628993586 75.827 2 0.09021970142814263 0.002683890756798207 0.011803152155219633 ['ENSG00000125484|ENST00000372146|GTF3C4'] 69810 11355 LVGIISSR True PC9_epitope_Rep3 843.51780208079 843.51670993586 48.681 2 0.09021841126892165 0.002683890756798207 0.011803491191658692 ['ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 17789 17714 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.5387749679298 72.932 1 0.09021620859844037 0.002683890756798207 0.011804070045051589 ['ENSG00000143256|ENST00000368010|PFDN2'] 117096 23216 TVISLLTGL True PC9_epitope_Rep2 915.56408356687 915.5635349679301 94.782 1 0.09021386557156201 0.002683890756798207 0.011804685813063931 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 106039 9613 SSYSGVTQL True H1975_Epitope_Rep3 940.4501760134401 940.44962496793 41.99 1 0.09020936861381615 0.002683890756798207 0.011805867738182313 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 120496 5543 VEFATHEEA True H1975_Epitope_Rep2 1031.4559896698697 1031.4548899358601 26.329 2 0.09020118278717154 0.002683890756798207 0.011808019487817569 ['ENSG00000169813|ENST00000682386|HNRNPF'] 32334 20307 GFGFVLFK True PC9_epitope_Rep4 913.5061747679299 913.50506993586 86.253 2 0.09020095680899035 0.002683890756798207 0.011808078894349134 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 993 5972 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 27.95 2 0.09020007322158308 0.002683890756798207 0.011808311179946894 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 121383 6281 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51676993586 29.167 2 0.09019100697422255 0.002683890756798207 0.011810694848470601 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 115612 14524 TRVDPLTL True PC9_epitope_Rep2 913.5232813840499 913.52218993586 61.139 2 0.09019041747572215 0.002683890756798207 0.01181084985328479 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 106891 12121 SVDGVIKEV True PC9_epitope_Rep2 944.51786165044 944.51676993586 51.933 2 0.0901831838398355 0.002683890756798207 0.011812752047802008 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 103865 6445 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 33.419 2 0.09018316505832862 0.002683890756798207 0.011812756987062181 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 30213 20546 FYSNIQTVI True PC9_epitope_Rep2 1083.5600608155898 1083.5589699358602 84.463 2 0.090177288484753 0.002683890756798207 0.011814302535507798 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 77075 16959 NRLEEPGNFVL True PC9_epitope_Rep6 1286.6619001151798 1286.66080993586 77.778 2 0.09017101101520901 0.002683890756798207 0.011815953731685615 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 75853 6663 NLQDQLPARPS True H1975_Epitope_Rep3 1237.64149902377 1237.6404099358601 30.582 2 0.09016705796365616 0.002683890756798207 0.011816993635931467 ['ENST00000496239.5_1_1:16782351-16785491:+|nuORF'] 100373 5606 SKTSAQVVL True NCI_RA007_Epitope_Rep5 931.5338460677499 931.53274993586 28.251 2 0.0901590627929872 0.002683890756798207 0.011819097139653525 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'ENST00000528593.1_1_11:46804822-46806223:-|nuORF', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 9713 20918 AYGLVSATF True PC9_epitope_Rep1 927.47018318203 927.46963496793 85.282 1 0.09015709600976272 0.002683890756798207 0.011819614648316273 ['ENSG00000156875|ENST00000370152|MFSD14A'] 96383 12611 RYVPRASYF True PC9_epitope_Rep5 1157.5981776598098 1157.59654490379 53.509 3 0.0901549848210437 0.002683890756798207 0.011820170177456483 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 28022 10887 FQPEANPSHL True PC9_epitope_Rep1 1138.54072235334 1138.5396299358601 46.761 2 0.09015422227238366 0.002683890756798207 0.011820370837314052 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'ENST00000261509.10_1_4:169846154-169847533:+|nuORF'] 105766 3640 SSGPSTPLK True NCI_RA007_Epitope_Rep4 872.46034677432 872.45924993586 20.082 2 0.09014262304306948 0.002683890756798207 0.011823423498717128 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5'] 26263 9993 FHEPSQEL True PC9_epitope_Rep5 985.4505103666098 985.44940993586 43.413 2 0.0901304882921421 0.002683890756798207 0.01182661789626322 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 126006 19792 VLDSEGYLLFY True H1975_Epitope_Rep1 1317.6492697428098 1317.64867496793 82.372 1 0.09012551966094906 0.002683890756798207 0.011827926093155004 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 105673 16654 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.5113499358602 69.447 2 0.09012207315500288 0.002683890756798207 0.011828833608308973 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 47932 14101 IYIKQIKTF True PC9_epitope_Rep3 1152.6906810623198 1152.6890249037901 59.325 3 0.09011896402203143 0.002683890756798207 0.011829652344794125 ['ENSG00000103479|ENST00000262133|RBL2'] 38075 11890 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.44900993586 50.733 2 0.09011502064375834 0.002683890756798207 0.011830690842530977 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 69668 7981 LVDTAGQDEY True H1975_Epitope_Rep2 1109.48768372097 1109.4871749679298 35.647 1 0.09011227518717926 0.002683890756798207 0.011831413915785275 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 109938 8537 TEGGGVFTA True H1975_Epitope_Rep2 837.38684748089 837.3862949679301 37.792 1 0.09011198196425574 0.002683890756798207 0.011831491144630375 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 69241 4951 LTSVINQK True NCI_RA007_Epitope_Rep1 901.5232813840499 901.52218993586 23.342 2 0.09010832858386003 0.002683890756798207 0.01183245340936852 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 2673 7587 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.42212993586 34.135 2 0.09010185067576046 0.002683890756798207 0.011834159809251628 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 57737 8627 LEEMEAPAA True H1975_Epitope_Rep3 959.4269980407098 959.42590993586 38.177 2 0.09010052385864026 0.002683890756798207 0.011834509345969763 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 1153 7875 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 35.237 2 0.09009843045149714 0.002683890756798207 0.01183506085304357 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 131036 5079 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6567899358602 24.618 2 0.09009832243974841 0.002683890756798207 0.011835089309345133 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 104858 6511 SRAPSVATV True PC9_epitope_Rep3 886.4872302285 886.48612993586 30.072 2 0.09009297867880213 0.002683890756798207 0.011836497234023156 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 91631 12168 RIPTAGIYGA True PC9_epitope_Rep2 1017.5607295219298 1017.55962993586 52.116 2 0.09009100791151228 0.002683890756798207 0.01183701651356033 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 117694 21155 TVTTVILEV True PC9_epitope_Rep5 973.5695628701299 973.56901496793 86.425 1 0.09008941699454369 0.002683890756798207 0.011837435721666966 ['ENSG00000119203|ENST00000238112|CPSF3'] 60762 13923 LHSDLEYTV True PC9_epitope_Rep5 1075.51858992643 1075.51748993586 58.575 2 0.09008940168759799 0.002683890756798207 0.011837439755129688 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 84945 8011 QEEISAEVA True H1975_Epitope_Rep2 974.4556553166998 974.45454993586 35.761 2 0.09008767715485176 0.002683890756798207 0.01183789418713625 ['ENST00000463912.5_1_7:139083347-139097327:+|nuORF', 'nc|ENSG00000269955|Q9Y383-3|LUC7L2', 'nc|ENSG00000269955|Q9Y383-2|LUC7L2', 'ENSG00000146963|ENST00000354926|LUC7L2', 'nc|ENSG00000164898|Q96HJ9-2|FMC1'] 27891 10341 FQDRPVSSL True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 45.103 2 0.0900863479813769 0.002683890756798207 0.01183824444920072 ['ENSG00000130147|ENST00000392011|SH3BP4'] 3990 15362 AHDVDPIEL True PC9_epitope_Rep5 1007.4923751785899 1007.49126993586 64.099 2 0.09007571338915486 0.002683890756798207 0.011841047216316208 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 9728 21874 AYGNVFSAF True PC9_epitope_Rep5 974.4497820906199 974.44923496793 89.176 1 0.09007393951129528 0.002683890756798207 0.01184151478632996 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 128702 13262 VPWGGAAA True PC9_epitope_Rep5 727.3653241906699 727.3647749679301 56.023 1 0.09006626272222776 0.002683890756798207 0.011843538484697444 ['ENSG00000258429|ENST00000288022|PDF'] 34860 23241 GQLDFSEFL True PC9_epitope_Rep3 1054.49712620586 1054.4960299358602 94.671 2 0.09006524159326108 0.002683890756798207 0.011843807691828797 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 17397 17994 EHDPQYAVIL True PC9_epitope_Rep1 1183.5873381925899 1183.58624993586 74.007 2 0.09006290085417841 0.002683890756798207 0.011844424818548362 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 72262 10001 MHSGPVVAM True PC9_epitope_Rep1 927.43064395251 927.42954993586 43.335 2 0.09005223309341494 0.002683890756798207 0.011847237717442073 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 30583 8879 GAIGSPVRL True H1975_Epitope_Rep3 868.51305105352 868.51194993586 39.154 2 0.09004705342659208 0.002683890756798207 0.011848603731520238 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant'] 103782 16190 SPVVPQISA True PC9_epitope_Rep1 896.4967322830399 896.49562993586 67.091 2 0.09004355301190495 0.002683890756798207 0.011849526967146855 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 104957 15170 SRDGMNIVL True PC9_epitope_Rep2 1003.5120650773499 1003.51096993586 63.608 2 0.09003559831426429 0.002683890756798207 0.011851625274663234 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 115230 7618 TREAGSALL True PC9_epitope_Rep2 916.4977949121999 916.49668993586 34.675 2 0.0900320912160471 0.002683890756798207 0.011852550496382971 ['ENSG00000145386|ENST00000274026|CCNA2'] 91002 6054 RFEEKHAYF True NCI_RA007_Epitope_Rep4 1225.5880068989297 1225.58635490379 29.903 3 0.09003130694796241 0.002683890756798207 0.011852757406660485 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 200 19581 AAFDGGFTV True PC9_epitope_Rep4 883.4075829254699 883.40703496793 83.44 1 0.09002763466794764 0.002683890756798207 0.011853726294926837 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 126718 14343 VLPGHFNTF True PC9_epitope_Rep6 1030.5236157372199 1030.5225099358602 67.067 2 0.0900173565561467 0.002683890756798207 0.01185643845338324 ['ENSG00000176055|ENST00000316610|MBLAC2'] 27969 19128 FQGVEFHYV True PC9_epitope_Rep3 1124.5290950404801 1124.5279899358602 78.797 2 0.09001380280259086 0.002683890756798207 0.011857376344234 ['ENSG00000143815|ENST00000272163|LBR'] 9685 11193 AYGFVARI True NCI_RA007_Epitope_Rep4 895.4915873329498 895.49048993586 49.94 2 0.09000660978419837 0.002683890756798207 0.011859274908581583 ['ENSG00000110799|ENST00000261405|VWF', 'VWF|p.N911Ifs*9|1|0.28|ENSG00000110799|chr12:6031534-6031534|C/-|frameshift_variant', 'ENST00000321023.5_1_12:6204574-6232125:-|nuORF', 'nc|ENSG00000110799|P04275-2|VWF'] 6359 6529 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 30.141 2 0.09000505813127119 0.002683890756798207 0.011859684498005993 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 110598 8735 TFSVVPSPK True NCI_RA007_Epitope_Rep1 960.5280324113198 960.52692993586 37.979 2 0.09000433440642855 0.002683890756798207 0.011859875544045065 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 8958 20584 AVGELLQEV True PC9_epitope_Rep3 956.51786165044 956.51676993586 84.442 2 0.08999962817991351 0.002683890756798207 0.011861117946272096 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 85036 12716 QEIATVVVP True H1975_Epitope_Rep3 954.5385970950199 954.5380449679301 54.122 1 0.08998662284000707 0.002683890756798207 0.011864551881641922 ['ENSG00000139233|ENST00000266604|LLPH'] 17865 13706 EHVPGADIL True PC9_epitope_Rep4 949.4868958753299 949.48578993586 60.608 2 0.08998609850304665 0.002683890756798207 0.011864690347520303 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 103719 6824 SPVFTSRSAA True PC9_epitope_Rep3 1021.51925863277 1021.51816993586 31.265 2 0.08996751700411536 0.002683890756798207 0.011869598300894195 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 35962 8310 GTVDVTPFIKK True NCI_RA007_Epitope_Rep3 1203.68632395787 1203.68467490379 39.805 3 0.0899629935726501 0.002683890756798207 0.011870793370972776 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 5906 6612 APGLPTARA True PC9_epitope_Rep4 852.4817509252399 852.48064993586 32.592 2 0.08996168852545787 0.002683890756798207 0.011871138179686588 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 137672 13079 YEIPSNLTP True H1975_Epitope_Rep3 1032.51277627 1032.51227496793 55.552 1 0.08995653241755322 0.002683890756798207 0.011872500576329712 ['ENSG00000069248|ENST00000261396|NUP133'] 4307 22211 AIIGGMFTV True PC9_epitope_Rep3 907.48372507119 907.48317496793 90.721 1 0.08995256961016714 0.002683890756798207 0.011873547768141602 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 138106 6267 YGGPVGAGIR True H1975_Epitope_Rep3 945.5032146458099 945.50210993586 29.114 2 0.0899417516046687 0.002683890756798207 0.011876406925603395 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 9693 21583 AYGGAFYAF True PC9_epitope_Rep5 965.42831837005 965.4277649679301 88.059 1 0.08994021058810223 0.002683890756798207 0.011876814263397224 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 4118 12819 AHSNLASVL True PC9_epitope_Rep1 910.4872302285 910.48612993586 54.182 2 0.08991909319674925 0.002683890756798207 0.011882397567686595 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 24677 19856 FALPGLLHA True PC9_epitope_Rep4 937.5385375253701 937.53744993586 84.506 2 0.0899085140933818 0.002683890756798207 0.011885195549223551 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 109158 21630 TAMDVVYAL True PC9_epitope_Rep5 981.4841189940099 981.48302993586 88.242 2 0.08990659565764657 0.002683890756798207 0.011885703007560644 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 142645 14464 YYPAKIEAI True PC9_epitope_Rep2 1066.5698972233 1066.5688099358601 60.907 2 0.08989097805899779 0.002683890756798207 0.011889834886513578 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 106064 7186 STAGLIIGK True NCI_RA007_Epitope_Rep5 858.51746772762 858.51636993586 34.32 2 0.08989027375415094 0.002683890756798207 0.011890021253356274 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA2|p.Q205Rfs*191|1|0.14|ENSG00000104967|chr19:45940729-45940729|G/-|frameshift_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 95979 10834 RYLEQLHQL True PC9_epitope_Rep6 1198.64585612822 1198.64422490379 52.526 3 0.08988712626043477 0.002683890756798207 0.0118908541487429 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 106153 11988 STDNSLLGY True H1975_Epitope_Rep2 968.4450906330001 968.44454496793 51.194 1 0.08988539667857515 0.002683890756798207 0.01189131185727585 ['ENSG00000124171|ENST00000371610|PARD6B'] 107813 6369 SVTSKGVVTC True PC9_epitope_Rep5 979.5008316873099 979.49972993586 29.476 2 0.08987612399304189 0.002683890756798207 0.011893766022127345 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 23783 18040 EYGYIRTVL True PC9_epitope_Rep2 1112.5866099165999 1112.58550993586 74.696 2 0.08987336318168859 0.002683890756798207 0.011894496807690313 ['PKP2|p.R46Afs*66|1|0.45|ENSG00000057294|chr12:32896596-32896596|G/-|frameshift_variant', 'PKP2|p.G47Rfs*39|1|0.45|ENSG00000057294|chr12:32896593-32896594|-/T|frameshift_variant', 'PKP2|p.V104Cfs*3|1|0.31|ENSG00000057294|chr12:32878947-32878948|-/G|frameshift_variant', 'nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 110198 8633 TEQEVYAQVA True H1975_Epitope_Rep2 1136.5349682665599 1136.5338699358601 38.163 2 0.0898649798416368 0.002683890756798207 0.011896716134552251 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 116670 8236 TVAVPLVGK True NCI_RA007_Epitope_Rep3 882.5538532363399 882.55274993586 39.531 2 0.08986449367100197 0.002683890756798207 0.011896844850828713 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 53940 12346 KTSESSTILVV True PC9_epitope_Rep4 1162.64451871554 1162.64342993586 55.297 2 0.08984984323568082 0.002697077189176512 0.011900724250190493 ['ENSG00000203926|ENST00000370518|SPANXA2', 'ENSG00000198573|ENST00000358993|SPANXC', 'ENSG00000198021|ENST00000370519|SPANXA1', 'ENSG00000196406|ENST00000370515|SPANXD', 'ENSG00000227234|ENST00000449283|SPANXB1'] 90656 12113 REQDLILAV True NCI_RA007_Epitope_Rep5 1055.5975089534697 1055.59640993586 53.248 2 0.08984801225325659 0.002697077189176512 0.011901209173987671 ['ENSG00000177303|ENST00000321617|CASKIN2'] 100441 20353 SLAGGIIGV True PC9_epitope_Rep2 785.46470387877 785.4641549679301 83.71 1 0.08984757752707224 0.002697077189176512 0.01190132431113925 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 140519 13871 YRMDGHIQL True PC9_epitope_Rep3 1131.5495132152298 1131.54787490379 58.437 3 0.08984460755399355 0.002697077189176512 0.011902110936171504 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 99225 11416 SHLVATVTV True PC9_epitope_Rep2 925.52328138405 925.52218993586 49.234 2 0.08984325080971164 0.002697077189176512 0.01190247029890135 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 90254 7792 REEEVTGPVIA True H1975_Epitope_Rep2 1198.61936659686 1198.61826993586 34.92 2 0.08983432416108265 0.002697077189176512 0.011904834968648623 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 4767 13288 ALDSSSILY True H1975_Epitope_Rep2 967.4862271689899 967.4856749679301 56.242 1 0.08983356198554061 0.002697077189176512 0.01190503688959072 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15', 'ENST00000546932.5_1_12:72265915-72278641:+|nuORF'] 137787 11698 YEQGFITDP True H1975_Epitope_Rep2 1068.4763907612798 1068.47528993586 50.071 2 0.08981613774356466 0.002697077189176512 0.011909653927133234 ['ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 114345 7075 TPRSTVGVAV True PC9_epitope_Rep4 985.5556441414898 985.55454993586 34.48 2 0.08981082659218789 0.002697077189176512 0.011911061601303551 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 108288 19641 SYILRPVAF True PC9_epitope_Rep2 1064.60186605792 1064.6007699358602 80.934 2 0.08980792476825743 0.002697077189176512 0.011911830770831959 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant'] 71659 17091 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50939496793 71.166 1 0.08980421100032701 0.002697077189176512 0.011912815226178335 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 1134 6159 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 28.663 2 0.08980369398523463 0.002697077189176512 0.01191295228399986 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 99112 13707 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 57.574 2 0.08977632919796633 0.002697077189176512 0.011920208666401208 ['ENSG00000132646|ENST00000379143|PCNA'] 115627 10621 TRVNPVTL True PC9_epitope_Rep1 898.5236157372199 898.52250993586 45.747 2 0.08976940334268825 0.002697077189176512 0.011922045874131983 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19', 'nc|ENSG00000278259|Q96H55-2|MYO19', 'nc|ENSG00000278259|Q96H55-3|MYO19'] 71076 17933 LYLEFLQKF True NCI_RA007_Epitope_Rep5 1199.6590465808697 1199.6579499358602 75.769 2 0.08976755634384341 0.002697077189176512 0.011922535869057765 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 12665 17828 DLDLSPLEY True H1975_Epitope_Rep1 1063.50735653639 1063.50677496793 74.242 1 0.08976603842607973 0.002697077189176512 0.011922938575507793 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 54433 15193 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.69921490379 67.283 3 0.08975785784031684 0.002697077189176512 0.011925109121952535 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 16557 12245 EELSNVLAA True H1975_Epitope_Rep1 944.4814761417199 944.48092496793 52.122 1 0.08975109404416068 0.002697077189176512 0.011926904035401219 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 114326 20752 TPQSLFILFG True H1975_Epitope_Rep3 1121.6120963884498 1121.61098993586 86.71 2 0.08974846434057107 0.002697077189176512 0.011927601950739162 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 103928 17526 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51234993586 72.208 2 0.08974742250651971 0.002697077189176512 0.011927878461015335 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 35269 19777 GRDLTDYLM True PC9_epitope_Rep5 1082.50664534374 1082.50554993586 81.117 2 0.08974587447114599 0.002697077189176512 0.011928289331976606 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 140279 15318 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54290993586 66.853 2 0.08973314569141175 0.002697077189176512 0.011931668241836205 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 26244 10543 FHEGDAYVV True PC9_epitope_Rep6 1035.4661604307498 1035.4650699358601 51.352 2 0.08973105894210888 0.002697077189176512 0.01193222226489193 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 49465 8959 KEYLQGLEA True H1975_Epitope_Rep3 1049.5393253710097 1049.53822993586 39.456 2 0.0897262879202336 0.002697077189176512 0.011933489042325848 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000475705.1_1_6:32086681-32087735:-|nuORF'] 6711 8724 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 38.509 2 0.08971368100123364 0.002697077189176512 0.011936836979605198 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 110373 7833 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 35.108 2 0.08971177458808713 0.002697077189176512 0.011937343330657763 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 128251 17942 VPPAVTGITFL True H1975_Epitope_Rep1 1113.64339651673 1113.6428749679299 74.752 1 0.08971153898237541 0.002697077189176512 0.011937405909899867 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 98311 9354 SEVQYIQEA True H1975_Epitope_Rep3 1065.4978544818498 1065.49727496793 40.98 1 0.08970668281968627 0.002697077189176512 0.01193869582458638 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 8355 12388 ATLGGPAIVHA True PC9_epitope_Rep1 1005.56072952193 1005.55962993586 52.51 2 0.08970142943319738 0.002697077189176512 0.011940091400046338 ['ENSG00000123983|ENST00000357430|ACSL3'] 27895 9811 FQDRPVSSL True PC9_epitope_Rep4 1047.53490869691 1047.53380993586 45.38 2 0.0897007176632884 0.002697077189176512 0.011940280495401787 ['ENSG00000130147|ENST00000392011|SH3BP4'] 71687 5292 MEDANVRVA True H1975_Epitope_Rep3 1003.4756795686299 1003.47458993586 25.435 2 0.08970034937377477 0.002697077189176512 0.011940378339701303 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 104552 13576 SQPPVQVSV True PC9_epitope_Rep2 939.5025459394699 939.50144993586 57.512 2 0.08969035699809909 0.002697077189176512 0.011943033326023188 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 17691 18367 EHLTMLQVL True PC9_epitope_Rep6 1082.57941636118 1082.57830993586 83.293 2 0.08969028833159828 0.002697077189176512 0.011943051572727681 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 139538 21557 YLTDLQVSL True PC9_epitope_Rep2 1050.55972646242 1050.5586299358602 88.388 2 0.08968985451926298 0.002697077189176512 0.011943166850006444 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 108801 17513 SYTSGLETL True PC9_epitope_Rep4 969.4654917244101 969.46438993586 75.367 2 0.089689759221846 0.002697077189176512 0.011943192173601893 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 34768 12527 GQFSGFPFEK True NCI_RA007_Epitope_Rep5 1142.53965972418 1142.53856993586 54.84 2 0.08967415887791362 0.002697077189176512 0.011947338372723973 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 71250 8959 LYPPRQPTF True NCI_RA007_Epitope_Rep3 1117.59202965021 1117.59092993586 42.335 2 0.08967381274706743 0.002697077189176512 0.011947430381482908 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 33162 8910 GIVEFSGK True PC9_epitope_Rep4 835.44396843419 835.44286993586 41.81 2 0.0896625699402388 0.002697077189176512 0.011950419317292026 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 71329 18436 LYQHEINLF True PC9_epitope_Rep4 1175.5975089534697 1175.59640993586 78.983 2 0.08964625149176975 0.002697077189176512 0.011954758887080204 ['ENSG00000115816|ENST00000234170|CEBPZ'] 101480 18860 SLLDDLHSA True PC9_epitope_Rep3 969.47672511445 969.47562993586 77.769 2 0.08964220258529461 0.002697077189176512 0.011955835844778771 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 32961 10190 GIDSSSPEV True PC9_epitope_Rep3 889.4028914678499 889.40234496793 44.149 1 0.0896354937620021 0.002697077189176512 0.011957620508603037 ['ENSG00000169564|ENST00000303577|PCBP1'] 47599 7316 IVVVTAGVR True H1975_Epitope_Rep3 912.5756513100798 912.57454993586 33.113 2 0.08963092987375078 0.002697077189176512 0.011958834726388028 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 31665 10136 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51727496793 43.926 1 0.08963054772713594 0.002697077189176512 0.011958936401394688 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 132217 17484 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 72.43 2 0.08962995714328777 0.002697077189176512 0.011959093535408295 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 3950 16228 AHDGSVFTL True PC9_epitope_Rep3 945.4555957470501 945.45448993586 67.558 2 0.08962977389786503 0.002697077189176512 0.011959142291098663 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'EML4-ALK|7|fusion', 'EML4-ALK|6|fusion'] 1960 8484 AEIPEEHIP True H1975_Epitope_Rep1 1033.50802524273 1033.5069299358602 37.563 2 0.08961530842721198 0.002697077189176512 0.011962991679147411 ['ENSG00000198218|ENST00000395443|QRICH1'] 98689 8213 SGEVLVNVK True PC9_epitope_Rep2 943.53384606775 943.53274993586 36.948 2 0.08960078929158363 0.002697077189176512 0.01196685652655254 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 29792 16020 FVPIKVEQI True PC9_epitope_Rep6 1071.63283183303 1071.6317299358602 73.944 2 0.08959746372645251 0.002697077189176512 0.011967741924675042 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 120250 4442 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 22.208 2 0.08959530172498723 0.002697077189176512 0.01196831756896458 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 73586 8509 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep2 1074.57433136118 1074.5732299358601 38.093 2 0.08959516915574668 0.002697077189176512 0.011968352867076138 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 29196 11062 FTSDTGLEY True H1975_Epitope_Rep2 1031.4447562798298 1031.44417496793 47.58 1 0.08958264742737176 0.002697077189176512 0.01197168736776771 ['nc|ENSG00000088305|Q9UBC3-4|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-3|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-5|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-2|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-6|DNMT3B', 'ENSG00000088305|ENST00000328111|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-7|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-8|DNMT3B'] 39153 9218 HHYSGNNIEL True PC9_epitope_Rep5 1182.5417849825 1182.54013490379 40.403 3 0.08958182810716162 0.002697077189176512 0.011971905581042205 ['ENSG00000156482|ENST00000287038|RPL30'] 132947 14941 VVPAALKVV True PC9_epitope_Rep3 894.59023874506 894.58914993586 62.603 2 0.0895798944459591 0.002697077189176512 0.011972420596735438 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 42002 23851 IDFPGGILSF True PC9_epitope_Rep5 1064.55424715916 1064.5531499358601 96.725 2 0.0895762325793862 0.002697077189176512 0.011973395963977531 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 35224 15670 GRAPQVLVL True PC9_epitope_Rep1 951.5865503469499 951.58544993586 65.096 2 0.08957240332480797 0.002697077189176512 0.011974415996743534 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 103701 5521 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 27.998 2 0.08957214396072914 0.002697077189176512 0.01197448508884364 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 84968 12070 QEEPGQLLP True H1975_Epitope_Rep2 1009.5080252427299 1009.50692993586 51.509 2 0.08956297420881358 0.002697077189176512 0.011976928065071852 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF', 'ENST00000566424.1_1_16:29468907-29469081:+|nuORF', 'ENST00000395400.4_1_16:29468907-29472819:+|nuORF', 'nc|ENSG00000181625|Q9BQ83-2|SLX1A', 'ENST00000561824.5_1_16:30205929-30212162:+|nuORF', 'ENSG00000181625|ENST00000330181|SLX1B', 'ENSG00000132207|ENST00000251303|SLX1A'] 111290 16469 THMELYSQL True PC9_epitope_Rep1 1120.52229540788 1120.52118993586 68.174 2 0.08955408358711175 0.002697077189176512 0.01197929712646404 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 109305 11339 TAVTVNQSL True PC9_epitope_Rep4 931.4974605590301 931.49636993586 51.392 2 0.08954842651126871 0.002697077189176512 0.01198080478385518 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 140282 16845 YRAPEVLL True PC9_epitope_Rep5 959.5440168286299 959.54290993586 69.803 2 0.08953631120766489 0.002697077189176512 0.011984034216065708 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 70838 12464 LYDIDVAK True PC9_epitope_Rep2 935.49639792987 935.49530993586 53.253 2 0.08953586762729947 0.002697077189176512 0.01198415247162607 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF'] 49279 8519 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5911749679299 37.723 1 0.08953402049697587 0.002697077189176512 0.011984644916091903 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 99135 13647 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 57.559 2 0.08953232392082212 0.002697077189176512 0.011985097239719269 ['ENSG00000132646|ENST00000379143|PCNA'] 22456 15842 ETEVSFLDY True H1975_Epitope_Rep3 1101.4866210918099 1101.4860749679299 66.384 1 0.08952414233813555 0.002697077189176512 0.011987278755585782 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant'] 128481 5582 VPSLQGEKA True PC9_epitope_Rep4 927.5025459394699 927.50144993586 28.251 2 0.08952135148817542 0.002697077189176512 0.011988022986448969 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 29319 16273 FVDEPLIHA True PC9_epitope_Rep2 1039.5338460677497 1039.53274993586 67.836 2 0.08950364117850994 0.002697077189176512 0.011992746781180872 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 32879 10755 GHSGDVMSL True PC9_epitope_Rep3 901.3963666187701 901.39526993586 46.322 2 0.08949597710461644 0.002697077189176512 0.011994791532423039 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 111295 16384 THMELYSQL True PC9_epitope_Rep5 1120.52229540788 1120.52118993586 68.019 2 0.08949232086687997 0.002697077189176512 0.011995767121537059 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 54727 14055 KYMDVQFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 62.588 2 0.08949082012380084 0.002697077189176512 0.011996167584567787 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 29348 17934 FVDGSAIQV True PC9_epitope_Rep2 934.47599683846 934.47488993586 74.289 2 0.08949020941188189 0.002697077189176512 0.011996330552488155 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 14087 8597 DRTGTGTLSV True PC9_epitope_Rep2 1005.50908787189 1005.50798993586 38.43 2 0.08948279683781438 0.002697077189176512 0.011998308758107257 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 103713 6855 SPVFTSRSAA True PC9_epitope_Rep1 1021.51925863277 1021.51816993586 31.172 2 0.08948012362179432 0.002697077189176512 0.011999022239284245 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 73466 13735 MVAPAVASV True PC9_epitope_Rep6 843.4524249429099 843.45132993586 64.622 2 0.0894698549121511 0.002697077189176512 0.012001763330375366 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 135177 15085 WEQFTDAVV True H1975_Epitope_Rep2 1093.50802524273 1093.5069299358602 63.176 2 0.08946937105234072 0.002697077189176512 0.012001892504720798 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG'] 14522 10813 DTLYEAVR True PC9_epitope_Rep2 965.4818104948899 965.48070993586 46.909 2 0.08946803388142179 0.002697077189176512 0.012002249491359118 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF', 'ENST00000490335.4_1_6:35436211-35436651:+|nuORF'] 75777 14613 NLLSVAYK True PC9_epitope_Rep1 906.5174677276199 906.51636993586 61.032 2 0.08946356685287289 0.002697077189176512 0.012003442133865562 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 2675 7578 AESPGVPVA True H1975_Epitope_Rep3 825.4232329896099 825.4226849679301 34.131 1 0.08946259864481075 0.002697077189176512 0.012003700648469222 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 26545 13195 FIIDPNGVIK True NCI_RA007_Epitope_Rep1 1114.6386454894598 1114.63754993586 55.324 2 0.08946159538894208 0.002697077189176512 0.012003968526503126 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 72386 19544 MKFNPFVTSD True PC9_epitope_Rep3 1184.5535955361597 1184.5524899358602 80.409 2 0.08945920543768264 0.002697077189176512 0.012004606687033703 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 110939 12542 THAAQQILL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 53.113 2 0.08945171966897442 0.002697077189176512 0.012006605731333823 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 6728 22268 AQAQEVFFL True PC9_epitope_Rep1 1051.53384606775 1051.53274993586 90.47 2 0.0894490387271683 0.002697077189176512 0.012007321742586102 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 84969 6170 QEEPQSLQA True H1975_Epitope_Rep2 1028.4774533904397 1028.47634993586 28.705 2 0.08941562818443342 0.002697077189176512 0.012016248235782661 ['nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-13|PML', 'nc|ENSG00000140464|P29590-11|PML', 'ENST00000569161.1_1_15:74315283-74324931:+|nuORF', 'ENST00000564725.1_1_15:74290377-74317280:+|nuORF'] 69656 7683 LVDSNNPKI True PC9_epitope_Rep1 998.53965972418 998.53856993586 34.375 2 0.08940882678241535 0.002697077189176512 0.012018066175514703 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 107746 5530 SVSNVVITK True NCI_RA007_Epitope_Rep4 945.54949613189 945.54838993586 27.867 2 0.08940842890934231 0.002697077189176512 0.01201817253065143 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 6153 10291 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 47.271 2 0.0894026951928502 0.002697077189176512 0.012019705304727572 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 48695 17200 KAYTSQFISL True PC9_epitope_Rep4 1156.6128246644398 1156.61172993586 74.166 2 0.08940128884539472 0.002697077189176512 0.01202008128683576 ['ENSG00000131459|ENST00000253778|GFPT2'] 109807 4629 TEEEFSKTP True H1975_Epitope_Rep2 1066.4818700645399 1066.48076993586 22.905 2 0.08938954075243212 0.002697077189176512 0.012023222533287678 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 95822 15927 RYIPTAAAF True PC9_epitope_Rep3 1008.5392658013599 1008.53816993586 66.41 2 0.08938600997049066 0.002697077189176512 0.012024166757916588 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 130098 10500 VSDNGPCLGY True H1975_Epitope_Rep2 1023.4331460503099 1023.4320499358599 45.406 2 0.08936956587189852 0.002697077189176512 0.012028565269521986 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 77610 6633 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.4608649679301 30.468 1 0.08936917248954498 0.002697077189176512 0.01202867051112412 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 98301 6683 SEVPVTASA True H1975_Epitope_Rep3 859.42871229287 859.42816496793 30.661 1 0.08936427434317845 0.002697077189176512 0.012029980985414145 ['ENST00000420416.1_3_10:14920949-14938948:+|nuORF', 'ENST00000313519.9_2_10:14920918-14938948:+|nuORF'] 32846 10561 GHNLQTVQL True PC9_epitope_Rep2 1008.53524305008 1008.53414993586 45.94 2 0.08935543162855525 0.002697077189176512 0.012032347150919016 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 131232 21320 VTEVELLLY True H1975_Epitope_Rep1 1077.5957776179698 1077.59468993586 88.568 2 0.08934660509112022 0.002697077189176512 0.012034709426610522 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 34370 18813 GPFSQFIKA True PC9_epitope_Rep2 993.5283667644898 993.52726993586 77.736 2 0.08934349914465296 0.002697077189176512 0.012035540785758192 ['ENSG00000075420|ENST00000415807|FNDC3B'] 38176 5965 HDLVLVGGSTR True H1975_Epitope_Rep3 1152.6251206836398 1152.62402993586 27.955 2 0.08934147848616697 0.002697077189176512 0.012036081678368104 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 132531 9232 VVDPNDPQM True PC9_epitope_Rep6 1013.44879611445 1013.44768993586 45.657 2 0.08933343863952854 0.002697077189176512 0.012038234023158621 ['ENSG00000151883|ENST00000281631|PARP8'] 62966 13059 LLPHVVPGTT True PC9_epitope_Rep4 1032.59678067748 1032.59568993586 58.125 2 0.08933151153678703 0.002697077189176512 0.012038749981299975 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 11880 14092 DHIHIIAL True PC9_epitope_Rep6 930.52870111766 930.52760993586 66.077 2 0.0893220712884084 0.002697077189176512 0.012041277794278509 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 90176 3814 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 19.27 2 0.08930475259316667 0.002697077189176512 0.01204591652221251 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 76337 17395 NPTLILAA True PC9_epitope_Rep6 811.4803539429099 811.47980496793 79.526 1 0.08930075364883451 0.002697077189176512 0.012046987860055576 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 22455 15841 ETEVSFLDY True H1975_Epitope_Rep3 1101.4866210918099 1101.48552993586 66.38 2 0.0892997628691297 0.002697077189176512 0.012047253308984235 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant'] 95810 9618 RYIPTAAAF True NCI_RA007_Epitope_Rep3 1008.5392658013599 1008.53816993586 44.914 2 0.08929833300262698 0.002697077189176512 0.012047636407458226 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 118581 21146 TYQVLAVTF True PC9_epitope_Rep4 1040.5542471591598 1040.5531499358601 89.501 2 0.08929686086323942 0.002697077189176512 0.012048030843975674 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 108836 3620 SYVTTSTR True NCI_RA007_Epitope_Rep5 913.45051036661 913.44940993586 19.892 2 0.08929317616172254 0.002697077189176512 0.012049018155137953 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 57951 10042 LEGNLPVSA True H1975_Epitope_Rep2 898.47599683846 898.47488993586 43.618 2 0.08928453028576853 0.002697077189176512 0.012051335107190085 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 111623 15873 TIDPSNPMV True PC9_epitope_Rep3 972.45863252216 972.45752993586 66.204 2 0.08928210701518864 0.002697077189176512 0.012051984579299695 ['ENSG00000198730|ENST00000361367|CTR9'] 31580 12827 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47511496793 54.448 1 0.08927528227946546 0.002697077189176512 0.012053813886602975 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 89721 9314 RADDTFEAL True NCI_RA007_Epitope_Rep3 1036.48253877088 1036.4814499358602 43.738 2 0.08926085621944195 0.002697077189176512 0.012057681522750914 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 109939 8684 TEGGGVFTA True H1975_Epitope_Rep3 837.38684748089 837.3862949679301 38.402 1 0.08925427054075405 0.002697077189176512 0.012059447537651213 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 135067 16213 WEALVSPVV True H1975_Epitope_Rep1 998.54368247546 998.5431349679301 67.712 1 0.0892526592697911 0.002697077189176512 0.012059879653143629 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 134791 22128 VYTVVDEMF True PC9_epitope_Rep5 1101.5052483614097 1101.50467496793 90.15 1 0.08925104100425078 0.002697077189176512 0.012060313659200279 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 134697 19471 VYTKTISLW True PC9_epitope_Rep5 1109.6120963884498 1109.61098993586 79.949 2 0.08924435748022533 0.002697077189176512 0.012062106284111123 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1'] 37959 9398 HADPTELAL True NCI_RA007_Epitope_Rep5 965.4818104948899 965.48070993586 42.789 2 0.08923734209037605 0.002697077189176512 0.012063988191631738 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 47845 9534 IYHNPTANSF True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 42.019 2 0.08923420867451597 0.002697077189176512 0.012064828833172805 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 73916 14246 NAYTGVVYL True H1975_Epitope_Rep2 998.5072969667399 998.5067449679301 59.946 1 0.089233173439351 0.002697077189176512 0.012065106581121872 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 130154 9703 VSDTVVEPYNA True H1975_Epitope_Rep3 1192.5611830143998 1192.56008993586 42.345 2 0.08923200707508691 0.002697077189176512 0.012065419517536882 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 111071 12164 THDLEGPPL True PC9_epitope_Rep1 977.4818104948899 977.48070993586 51.652 2 0.0892288836974659 0.002697077189176512 0.012066257559914414 ['ENSG00000169564|ENST00000303577|PCBP1'] 120168 3979 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 20.374 2 0.08921984957550978 0.002697077189176512 0.012068681840865004 ['ENSG00000155506|ENST00000518297|LARP1'] 40379 6850 HQSSVGSVL True PC9_epitope_Rep4 912.46649478392 912.46538993586 33.568 2 0.08921781206056674 0.002697077189176512 0.012069228665858304 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant', 'UTRN|p.Q931Rfs*4|1|0.33|ENSG00000152818|chr6:144461278-144461278|C/-|frameshift_variant'] 60972 17002 LIDTLLDGY True H1975_Epitope_Rep2 1021.5331773614098 1021.53208993586 70.651 2 0.0892176401646185 0.002697077189176512 0.012069274800088911 ['nc|nan|Q9BWL3-5|C1orf43', 'nc|nan|Q9BWL3-3|C1orf43', 'nc|nan|Q9BWL3-4|C1orf43', 'nc|nan|Q9BWL3-2|C1orf43', 'ENSG00000143612|ENST00000368521|C1orf43'] 4030 20461 AHFPINVVI True PC9_epitope_Rep5 1008.5756513100799 1008.57454993586 83.74 2 0.08921558277289433 0.002697077189176512 0.012069826985349402 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 89447 16732 QYEQVKQLF True PC9_epitope_Rep1 1181.6080736371698 1181.6069699358602 69.187 2 0.08920854544086662 0.002697077189176512 0.01207171592198798 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 7004 15378 AQLQDFVRA True PC9_epitope_Rep5 1046.55089311422 1046.5497899358602 64.16 2 0.08920655809458453 0.002697077189176512 0.012072249409308048 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 139201 13879 YLETVAAYY True H1975_Epitope_Rep1 1091.51752729727 1091.5169749679299 58.535 1 0.089205362855501 0.002697077189176512 0.012072570272479873 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 2733 5908 AETDKIVVG True NCI_RA007_Epitope_Rep4 930.5022115862998 930.50110993586 29.348 2 0.08920372132377828 0.002697077189176512 0.012073010956516575 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'ENST00000557486.1_1_14:73748983-73753845:-|nuORF', 'ENST00000553997.5_1_14:73748216-73753941:-|nuORF'] 90119 7034 REASDLQIAA True H1975_Epitope_Rep2 1072.5512870370399 1072.55018993586 31.981 2 0.08920054612176176 0.002697077189176512 0.012073863411381665 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 89988 7210 RDLEAPEV True NCI_RA007_Epitope_Rep4 927.4661604307499 927.46506993586 34.367 2 0.08919986010529166 0.002697077189176512 0.012074047595510545 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6'] 109822 8152 TEEGYVPTA True H1975_Epitope_Rep2 965.4341915961298 965.43364496793 36.306 1 0.08919816493125857 0.002697077189176512 0.01207450273322611 ['ENSG00000060558|ENST00000262958|GNA15'] 29859 8782 FVTFDDHD True NCI_RA007_Epitope_Rep4 994.40322582102 994.40212993586 40.589 2 0.08919521270569451 0.002697077189176512 0.012075295415762353 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 40644 12025 HRNGGLITL True PC9_epitope_Rep1 979.55631284783 979.55520993586 51.116 2 0.08919038978137754 0.002697077189176512 0.012076590493091075 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 70629 24858 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 107.48 3 0.08918824962814843 0.002697077189176512 0.012077165220507108 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 114489 19503 TPYNYPVPV True PC9_epitope_Rep3 1048.5229470308798 1048.52184993586 80.251 2 0.08917159845830827 0.002697077189176512 0.012081637692140696 ['ENSG00000170906|ENST00000485876|NDUFA3'] 93328 9012 RPSSQYIVA True PC9_epitope_Rep3 1019.53999407735 1019.53888993586 39.609 2 0.08916989026379447 0.002697077189176512 0.012082096598406278 ['SLC7A5|p.F394Sfs*22|1|0.28|ENSG00000103257|chr16:87836607-87836607|A/-|frameshift_variant', 'ENSG00000103257|ENST00000261622|SLC7A5', 'ENST00000437413.2_1_16:21498935-21531497:-|nuORF', 'nc|ENSG00000260727|Q8MH63|SLC7A5P1', 'nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2', 'nc|ENSG00000258186|Q9GIP4|SLC7A5P2', 'ENST00000522841.6_1_16:21495824-21531728:-|nuORF'] 26895 21644 FLDGNELTL True PC9_epitope_Rep3 1020.51277627 1020.51227496793 88.552 1 0.08916412042450012 0.002697077189176512 0.012083646786951405 ['ENSG00000213719|ENST00000375784|CLIC1'] 34721 5854 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 27.915 2 0.0891600775801843 0.002697077189176512 0.012084733094066285 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 104680 17560 SQTSATFQL True PC9_epitope_Rep1 981.4767251144499 981.4761749679301 72.336 1 0.0891519981248518 0.002697077189176512 0.012086904310088546 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 6069 9007 APLLQPRAA True PC9_epitope_Rep5 935.5552502186699 935.55414993586 39.591 2 0.08914819139856286 0.002697077189176512 0.012087927430778462 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 43924 22920 IIDDTIFNL True PC9_epitope_Rep3 1062.55972646242 1062.5586299358602 93.431 2 0.08913564010725995 0.002697077189176512 0.012091301378167033 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 85742 16840 QHDFQAPYL True PC9_epitope_Rep1 1117.5192586327698 1117.5181699358602 69.6 2 0.08913245346936463 0.002697077189176512 0.012092158128851584 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 26548 18782 FIINGIEKV True PC9_epitope_Rep5 1031.60153170475 1031.6004299358601 77.258 2 0.08913222445599035 0.002697077189176512 0.012092219702967155 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 45062 12197 IPHSLPGAVAA True PC9_epitope_Rep2 1031.5763795860698 1031.5752899358602 52.228 2 0.08913026777820214 0.002697077189176512 0.01209274580094188 ['ENSG00000160113|ENST00000291442|NR2F6'] 99233 6534 SHMEGVASV True PC9_epitope_Rep2 915.4120166829099 915.41090993586 30.548 2 0.08912244230430438 0.002697077189176512 0.012094850076543286 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 57536 9434 LEDPTEVTP True H1975_Epitope_Rep3 999.47605640811 999.47494993586 41.289 2 0.08912171685975334 0.002697077189176512 0.012095045166643148 ['ENSG00000090889|ENST00000374403|KIF4A', 'KIF4A|p.G1151E|1|0.19|ENSG00000090889|chrX:70419740-70419740|G/A|missense_variant', 'ENSG00000226650|ENST00000435029|KIF4B'] 28021 12637 FQNSGNVNL True PC9_epitope_Rep5 991.4723084403499 991.47120993586 53.611 2 0.08911468471360168 0.002697077189176512 0.012096936440026846 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000490523.1_1_7:6064306-6068335:-|nuORF'] 8981 11551 AVGKIFSNV True PC9_epitope_Rep6 933.52836676449 933.52726993586 55.532 2 0.08911268714323144 0.002697077189176512 0.01209747373123065 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 6128 13641 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 60.362 2 0.08910738560129738 0.002697077189176512 0.012098899808851345 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 1553 13496 AEEQPPFGVYA True H1975_Epitope_Rep2 1206.5557037111398 1206.55460993586 57.045 2 0.08910360127491695 0.002697077189176512 0.012099917863345293 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2', 'ENST00000483432.1_1_9:140070142-140074912:-|nuORF'] 71930 9586 MEQQTLSIA True H1975_Epitope_Rep1 1019.4957463068699 1019.49464993586 41.797 2 0.0891003490040106 0.002697077189176512 0.012100792849690602 ['ENSG00000104738|ENST00000649973|MCM4'] 56858 19687 LDPHLVLDQLR True PC9_epitope_Rep1 1317.7404847890498 1317.73882490379 80.55 3 0.08909347807918862 0.002697077189176512 0.012102641590251305 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 35213 10188 GRAPGGLSL True PC9_epitope_Rep2 826.4661008611 826.4650099358599 44.526 2 0.08909109321664437 0.002697077189176512 0.012103283340988591 ['ENSG00000171223|ENST00000302754|JUNB'] 88799 6480 QTVAVGVIK True NCI_RA007_Epitope_Rep5 913.5596668927699 913.55856993586 31.592 2 0.08909088030938066 0.002697077189176512 0.012103340634489458 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 26048 15661 FGIDRDAIAQA True PC9_epitope_Rep5 1175.59348620219 1175.5923899358602 65.252 2 0.08909072928524105 0.002697077189176512 0.01210338127535168 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 85037 12809 QEIATVVVP True H1975_Epitope_Rep3 954.5385970950199 954.5380449679301 54.489 1 0.08908973720495957 0.002697077189176512 0.012103648249112118 ['ENSG00000139233|ENST00000266604|LLPH'] 109656 16039 TEAPPIIFATP True H1975_Epitope_Rep3 1155.6175756917098 1155.61646993586 67.151 2 0.08908773721083879 0.002697077189176512 0.012104186474448891 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 97496 7877 SEELTVTNA True H1975_Epitope_Rep3 962.4556553167 962.45454993586 35.276 2 0.08908296068694815 0.002697077189176512 0.012105471992876782 ['ENSG00000237649|ENST00000428849|KIFC1', 'KIFC1|p.R503Q|1|0.17|ENSG00000237649|chr6:33405603-33405603|G/A|missense_variant'] 52850 12165 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54290993586 51.782 2 0.08908081254985682 0.002697077189176512 0.012106050168737077 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 35680 15527 GTELGNELFY True H1975_Epitope_Rep2 1141.5291546101298 1141.52804993586 64.879 2 0.08908004019838266 0.002697077189176512 0.012106258055229725 ['ENSG00000126821|ENST00000247225|SGPP1'] 23020 15025 EVFSSFAHA True PC9_epitope_Rep5 993.4555957470499 993.45448993586 62.797 2 0.08907810614388342 0.002697077189176512 0.012106778641073193 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 41232 10555 HVLEEVQQV True PC9_epitope_Rep4 1079.56112344475 1079.56002993586 48.33 2 0.08907751166287559 0.002697077189176512 0.012106938660670285 ['ENSG00000136026|ENST00000378026|CKAP4'] 14176 14224 DSDSDQLFY True H1975_Epitope_Rep1 1088.42983449168 1088.42872993586 59.891 2 0.08907676752075692 0.002697077189176512 0.012107138968158354 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 32403 15233 GFQNALIVR True PC9_epitope_Rep3 1016.5767139392399 1016.57560993586 63.743 2 0.08907136933100393 0.002697077189176512 0.012108592141701761 ['CON__P02769'] 120164 3654 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 19.007 2 0.08907078823089606 0.002697077189176512 0.012108748581621623 ['ENSG00000155506|ENST00000518297|LARP1'] 86322 14905 QITVNDLPVGR True PC9_epitope_Rep2 1210.6669854956199 1210.6658899358602 62.597 2 0.08906796585750236 0.002697077189176512 0.012109508429462302 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 139622 14717 YLYYISNEY True H1975_Epitope_Rep2 1226.54955570154 1226.5484499358602 61.769 2 0.08906307565428515 0.002697077189176512 0.012110825091383755 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF'] 132260 13489 VTVSDLQHV True PC9_epitope_Rep3 996.5240096600402 996.52290993586 56.936 2 0.08903856238885383 0.002697077189176512 0.012117427201308956 ['ENSG00000068489|ENST00000262293|PRR11'] 86479 5403 QKSLSLSPG True NCI_RA007_Epitope_Rep3 915.5025459394699 915.50144993586 28.264 2 0.08903105530568733 0.002697077189176512 0.012119449749864314 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 100436 22457 SLAEVLQQL True PC9_epitope_Rep2 999.5600608155898 999.55896993586 91.87 2 0.08903046796639368 0.002697077189176512 0.01211960800351229 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 85995 20383 QHLPYIQIL True PC9_epitope_Rep2 1123.6389798426299 1123.6378899358601 83.828 2 0.08902385316352684 0.002697077189176512 0.012121390441589655 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 77506 13979 NTDFGDEFY True H1975_Epitope_Rep3 1106.4192698079798 1106.41867496793 59.089 1 0.0890211682549362 0.002697077189176512 0.01212211399316677 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 63454 8082 LLVVTDPR True NCI_RA007_Epitope_Rep5 911.54401682863 911.54290993586 37.775 2 0.08901957281891862 0.002697077189176512 0.01212254396392242 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000464073.1_1_14:77101591-77101843:-|nuORF', 'ENST00000416648.1_1_3:183605526-183606234:+|nuORF'] 1622 12384 AEFLPDPSA True H1975_Epitope_Rep2 945.4443623570099 945.44381496793 52.723 1 0.08901897651551628 0.002697077189176512 0.012122704671670821 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 28060 19916 FQSSAVMAL True PC9_epitope_Rep1 952.4688032830398 952.46770993586 81.425 2 0.08901222101553424 0.002697077189176512 0.012124525464693258 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 45261 2676 IPVEQKEGA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 14.799 2 0.08900944736310039 0.002697077189176512 0.01212527311516657 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 114223 10347 TPLYTDNTA True PC9_epitope_Rep5 994.46074069714 994.4596499358599 44.785 2 0.0890012467480485 0.002697077189176512 0.012127483882740354 ['ENSG00000174231|ENST00000304992|PRPF8'] 97299 9665 SEALPSDIA True H1975_Epitope_Rep1 901.43927697657 901.43872496793 42.102 1 0.08899059576600132 0.002697077189176512 0.012130355802811008 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 36907 18384 GVLPNIQAV True PC9_epitope_Rep6 909.5283667644899 909.52726993586 83.358 2 0.08898835885985629 0.002697077189176512 0.012130959041621835 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 39758 14681 HLVPEVPTV True PC9_epitope_Rep6 989.55458151233 989.55348993586 68.4 2 0.08897844799147364 0.002697077189176512 0.012133632101336039 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 79274 8871 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 39.066 2 0.08897643622809147 0.002697077189176512 0.01213417476189864 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 107376 14312 SVLKSIQEV True PC9_epitope_Rep3 1001.57571087973 1001.5746099358599 60.138 2 0.0889746422809637 0.002697077189176512 0.012134658687243977 ['ENSG00000039123|ENST00000230640|MTREX'] 75684 23461 NLIDLDDLYV True PC9_epitope_Rep3 1191.6023195503901 1191.60177496793 95.522 1 0.08897283949072195 0.002697077189176512 0.012135145016439529 ['ENSG00000125676|ENST00000245838|THOC2'] 10174 18304 AYVPGFAHI True PC9_epitope_Rep5 973.5021520166499 973.50104993586 75.421 2 0.0889690832271868 0.002697077189176512 0.012136158382994628 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF'] 48177 24062 IYPPLLGALSF True PC9_epitope_Rep3 1189.6746966450098 1189.67358993586 97.839 2 0.08896191724624429 0.002697077189176512 0.012138091846617306 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 1801 5355 AEHLGEAEVA True H1975_Epitope_Rep2 1024.48253877088 1024.4814499358602 25.643 2 0.08896154805351497 0.002697077189176512 0.012138191466925807 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 18408 20939 EIVTTIPTI True PC9_epitope_Rep2 985.56956287013 985.56846993586 85.989 2 0.08895905955182205 0.002697077189176512 0.012138862966472886 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 120241 4414 VECPPPRTTA True H1975_Epitope_Rep2 1069.52262976105 1069.5215299358601 22.086 2 0.08895118199059952 0.002697077189176512 0.012140988886266363 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 85271 18075 QEQLLAILP True H1975_Epitope_Rep2 1023.5964463243098 1023.59587496793 74.89 1 0.08894211223806424 0.002697077189176512 0.012143436978985291 ['ENSG00000171222|ENST00000305978|SCAND1'] 120049 6546 VDSQILPK True H1975_Epitope_Rep3 898.5123823471799 898.51128993586 30.147 2 0.08893956378813514 0.002697077189176512 0.012144124936384374 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF'] 40277 16795 HQLESILAM True PC9_epitope_Rep6 1040.5324661687598 1040.53136993586 77.108 2 0.08892945207772149 0.002697077189176512 0.012146854968999749 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 135126 6703 WEEPSSGNGTA True H1975_Epitope_Rep2 1133.46253160229 1133.46142993586 30.694 2 0.08892738943709501 0.002697077189176512 0.01214741192685284 ['ENSG00000179051|ENST00000375436|RCC2'] 54391 16441 KYFEKQFEL True PC9_epitope_Rep3 1230.6284747285797 1230.62683490379 68.378 3 0.088926558619349 0.002697077189176512 0.01214763627254346 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 1947 4855 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 23.762 2 0.0889240549661106 0.002697077189176512 0.012148312357637237 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 106366 19889 STIAILNSV True PC9_epitope_Rep4 916.5229470308801 916.52239496793 84.635 1 0.08891765136908197 0.002697077189176512 0.012150041743170017 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 57924 7246 LEGGQTPIA True H1975_Epitope_Rep3 884.4603467743199 884.4597949679301 32.844 1 0.08890622184714002 0.002697077189176512 0.012153129032025863 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 139956 22310 YQDELTALL True PC9_epitope_Rep1 1064.5389910178399 1064.5378899358602 90.627 2 0.08890109413479144 0.002697077189176512 0.012154514346595063 ['ENSG00000129474|ENST00000262713|AJUBA'] 68070 17381 LTDLVDDNYFY True H1975_Epitope_Rep2 1376.6136125100802 1376.6130749679298 72.15 1 0.08889603654537717 0.002697077189176512 0.012155880862812798 ['ENSG00000174231|ENST00000304992|PRPF8'] 27897 9285 FQDRPVSSL True PC9_epitope_Rep6 1047.53490869691 1047.53380993586 45.876 2 0.08889558530826899 0.002697077189176512 0.012156002790170792 ['ENSG00000130147|ENST00000392011|SH3BP4'] 134612 22488 VYSLQQFGF True PC9_epitope_Rep3 1087.53384606775 1087.53274993586 91.774 2 0.08889550925428662 0.002697077189176512 0.012156023340591715 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 31626 13680 GEFGGFGSV True NCI_RA007_Epitope_Rep2 855.3762827971899 855.37573496793 57.855 1 0.08889294498319468 0.002697077189176512 0.01215671624726734 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 42386 6172 IEDEVTRQV True H1975_Epitope_Rep3 1087.55095268387 1087.54984993586 28.751 2 0.08889136711700688 0.002697077189176512 0.012157142630264588 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 44979 13436 IPAPPLSKV True PC9_epitope_Rep1 920.56950330048 920.56840993586 56.542 2 0.08888756924840385 0.002697077189176512 0.012158168977156337 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.L27M|1|0.25|ENSG00000148346|chr9:128149604-128149604|C/A|missense_variant'] 35542 13535 GSVDGVIKEV True PC9_epitope_Rep1 1001.5393253710099 1001.53822993586 56.919 2 0.08888302468094283 0.002697077189176512 0.012159397221731308 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 90263 9519 REEFPTLQA True H1975_Epitope_Rep1 1089.5454733806098 1089.54436993586 41.537 2 0.08888252450274207 0.002697077189176512 0.012159532410333311 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 1942 10251 AEINATMSV True H1975_Epitope_Rep3 934.4429824580201 934.44243496793 44.479 1 0.08887826316786132 0.002697077189176512 0.01216068422527224 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 53104 6695 KPSESIYSA True PC9_epitope_Rep1 980.48147614172 980.48036993586 30.555 2 0.0888588383451472 0.002697077189176512 0.012165935952692454 ['nc|ENSG00000189057|Q6SJ93-2|FAM111B', 'ENSG00000189057|ENST00000343597|FAM111B'] 35737 7231 GTGNLGFPK True NCI_RA007_Epitope_Rep4 889.46576650793 889.46466993586 34.448 2 0.08885523999295214 0.002697077189176512 0.012166909044507755 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 5773 14428 APDAKSFVL True PC9_epitope_Rep4 946.5123823471799 946.51128993586 63.406 2 0.08883009213816553 0.0027250351617440225 0.012173711759047703 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1'] 125956 16847 VLDFITHLY True H1975_Epitope_Rep2 1119.5964463243101 1119.5953499358602 70.049 2 0.08882956188484553 0.0027250351617440225 0.012173855235900463 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 40210 9437 HQGPATTVAF True PC9_epitope_Rep4 1027.50869394907 1027.50758993586 43.911 2 0.08882217218599395 0.0027250351617440225 0.012175854919647821 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 138086 9916 YGGGYGGQSSM True PC9_epitope_Rep5 1062.40765957846 1062.40656993586 43.113 2 0.08882150491783114 0.0027250351617440225 0.012176035500515724 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000515481.5_1_5:179043097-179043181:-|nuORF', 'ENST00000502632.5_1_5:179042549-179043984:-|nuORF'] 121354 7330 VEVILQHSA True NCI_RA007_Epitope_Rep4 994.5447451046201 994.54364993586 34.834 2 0.08881772387442977 0.0027250351617440225 0.012177058801254385 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant', 'ENST00000472714.1_1_7:107569804-107570089:-|nuORF'] 108298 24440 SYIPLFPQLYF True PC9_epitope_Rep5 1386.72237511342 1386.7212699358602 99.051 2 0.088816973845791 0.0027250351617440225 0.01217726179849853 ['ENSG00000165996|ENST00000361271|HACD1'] 85730 10836 QHAVGIVV True PC9_epitope_Rep3 821.47593726881 821.47484993586 46.652 2 0.08881097470329752 0.0027250351617440225 0.012178885597471014 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 104072 8291 SQDPYHETL True PC9_epitope_Rep4 1088.4774533904401 1088.47634993586 39.351 2 0.08880296333533769 0.0027250351617440225 0.01218105436837347 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 91814 4520 RKIKVSNTL True NCI_RA007_Epitope_Rep2 1057.66077791637 1057.6596899358601 22.213 2 0.08877676193941066 0.0027250351617440225 0.012188149941851101 ['nc|ENSG00000131100|P36543-3|ATP6V1E1', 'nc|ENSG00000131100|P36543-2|ATP6V1E1', 'ENSG00000131100|ENST00000253413|ATP6V1E1'] 21158 12737 ERATNIEVL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 54.0 2 0.0887739752066607 0.0027250351617440225 0.012188904843926568 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 8456 2610 ATPTSPIRVK True NCI_RA007_Epitope_Rep3 1068.6291434349198 1068.6280499358602 14.735 2 0.08876041744118937 0.0027250351617440225 0.012192578157219277 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 141548 14789 YTMSYGDSLYY True H1975_Epitope_Rep2 1361.54856972537 1361.5474699358601 62.044 2 0.08876039186116896 0.0027250351617440225 0.01219258508880655 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 27681 15133 FPHLQDAQV True PC9_epitope_Rep5 1053.5243440132099 1053.5232499358601 63.214 2 0.08875755492428881 0.0027250351617440225 0.012193353855466573 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 27391 22116 FLVPTFEQL True PC9_epitope_Rep4 1092.5855472874398 1092.5844499358602 93.285 2 0.08875495335071534 0.0027250351617440225 0.012194058882526861 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 77990 21106 NVPEGLLATV True PC9_epitope_Rep1 1011.56006081559 1011.5594749679301 86.012 1 0.08875313728396557 0.0027250351617440225 0.012194551059885202 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 65963 15464 LSDVFPGVQY True H1975_Epitope_Rep2 1123.5549754351498 1123.55447496793 64.639 1 0.08875021077214665 0.0027250351617440225 0.012195344221591447 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 121521 17759 VFAGVFNTF True NCI_RA007_Epitope_Rep4 1000.50181766348 1000.50072993586 76.876 2 0.08874086347764355 0.0027250351617440225 0.012197877910940812 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 47847 10693 IYHNPTANSF True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 46.078 2 0.08872383829072994 0.0027461291264972245 0.01220249405779792 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 15208 5841 EADPGQYRC True PC9_epitope_Rep5 1037.42364399577 1037.4225499358602 27.46 2 0.08872219203472559 0.0027461291264972245 0.01220294050515685 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 35873 8443 GTMTGMLYK True NCI_RA007_Epitope_Rep4 1000.47217441132 1000.47106993586 39.292 2 0.08871650066323122 0.0027461291264972245 0.0122044840643438 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 77186 8619 NRSDPVTL True PC9_epitope_Rep3 900.46649478392 900.46538993586 38.102 2 0.08870074419730163 0.0027461291264972245 0.01220875834454134 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 106052 4963 STAAVGVLK True NCI_RA007_Epitope_Rep3 844.50181766348 844.50072993586 26.519 2 0.08869958387529402 0.0027461291264972245 0.012209073162758006 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF'] 39759 14765 HLVPEVPTV True PC9_epitope_Rep6 989.55458151233 989.55348993586 68.746 2 0.08866851060066565 0.0027461291264972245 0.012217506808599931 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 106457 5964 STITGVMDK True NCI_RA007_Epitope_Rep3 950.4742825863 950.47318993586 30.441 2 0.08866408820797712 0.0027461291264972245 0.01221870754453372 ['ENSG00000147872|ENST00000276914|PLIN2'] 47967 23427 IYIWDLNNF True PC9_epitope_Rep2 1196.5866099165999 1196.58550993586 95.585 2 0.08866172948591024 0.0027461291264972245 0.01221934801321584 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 62187 18416 LLEPFVHQV True PC9_epitope_Rep2 1080.59678067748 1080.59568993586 76.168 2 0.08865787506083929 0.0027461291264972245 0.01222039468151186 ['nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2', 'IP6K2|p.Y298Vfs*5|1|0.17|ENSG00000068745|chr3:48688662-48688663|-/C|frameshift_variant', 'ENSG00000068745|ENST00000328631|IP6K2'] 25752 10604 FETAVAPNV True H1975_Epitope_Rep2 946.4759968384599 946.47544496793 45.812 1 0.08865656213692054 0.0027461291264972245 0.012220751225063654 ['ENSG00000157933|ENST00000378536|SKI'] 33160 9402 GIVEFSGK True PC9_epitope_Rep2 835.44396843419 835.44286993586 41.504 2 0.08865027879071533 0.0027461291264972245 0.012222457695058808 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 47242 14213 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.4580849679301 59.493 1 0.08865016140402766 0.0027461291264972245 0.012222489577803633 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 22287 6365 ETDEQRLRDEY True H1975_Epitope_Rep2 1452.6481005258397 1452.64700993586 29.41 2 0.08864505914238317 0.0027461291264972245 0.012223875450641936 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 89801 4586 RALKTATSL True NCI_RA007_Epitope_Rep4 959.57637958607 959.57528993586 24.046 2 0.08864146714527976 0.0027461291264972245 0.012224851195523962 ['ENSG00000170876|ENST00000306077|TMEM43'] 92786 19011 RPAGALVALVV True PC9_epitope_Rep4 1064.67061432408 1064.66950993586 81.219 2 0.08862439101322715 0.0027461291264972245 0.012229490833109272 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 97324 7636 SEAPKSWM[Oxidation]V True H1975_Epitope_Rep2 1049.4851820036101 1049.48408993586 34.323 2 0.08862360826571096 0.0027461291264972245 0.012229703547897918 ['ENSG00000154760|ENST00000285013|SLFN13'] 105287 22111 SRLTLLTLL True PC9_epitope_Rep5 1028.65938093404 1028.65828993586 90.084 2 0.08860627303542662 0.0027461291264972245 0.012234415362769795 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1'] 71660 17176 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50939496793 71.517 1 0.08860391107970411 0.0027461291264972245 0.012235057488639628 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 6125 15035 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 62.961 2 0.08860022050127069 0.0027461291264972245 0.012236060880219122 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 15131 6945 EAAAAVVAAA True H1975_Epitope_Rep1 842.4497820906199 842.44923496793 31.754 1 0.08859162329889209 0.0027461291264972245 0.01223839858244651 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000398654.7_1_18:44497289-44497409:-|nuORF'] 43797 9130 IHQENMGQAL True PC9_epitope_Rep5 1139.53934245435 1139.5382499358602 40.065 2 0.08859047682495584 0.0027461291264972245 0.012238710356990557 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 142904 21086 YYVGGEIVTI True PC9_epitope_Rep2 1112.57537652656 1112.57426993586 86.564 2 0.08858903135650098 0.0027461291264972245 0.012239103451432297 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 84233 15159 PYMAKFVVF True NCI_RA007_Epitope_Rep4 1100.5728744287599 1100.5717699358602 65.897 2 0.08858327654770207 0.0027461291264972245 0.012240668587189796 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 90333 4500 REFEERHIP True H1975_Epitope_Rep3 1211.6047195922297 1211.60308490379 22.429 3 0.08858162129524501 0.0027461291264972245 0.01224111880134075 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 141390 8798 YTEGAELVD True H1975_Epitope_Rep1 995.4447562798299 995.4442049679301 38.767 1 0.08857949720906003 0.0027461291264972245 0.012241696557077113 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 60796 18355 LHSLPIVSM True PC9_epitope_Rep2 995.54738795691 995.54628993586 75.933 2 0.08857455815461145 0.0027461291264972245 0.012243040089493817 ['ENSG00000125484|ENST00000372146|GTF3C4'] 48451 19351 IYYVDVQKF True PC9_epitope_Rep5 1173.6070110080097 1173.6059099358602 79.48 2 0.08857356153275074 0.0027461291264972245 0.012243311209650928 ['ENSG00000160410|ENST00000291842|SHKBP1'] 105068 8265 SRDQSTPII True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 37.152 2 0.08857064535099002 0.0027461291264972245 0.01224410455782688 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 38070 12059 HAVGDIPGV True PC9_epitope_Rep3 863.45011644379 863.44900993586 51.426 2 0.08855976366616701 0.0027461291264972245 0.01224706535249719 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 115817 8532 TSDSTVYDY True H1975_Epitope_Rep1 1049.41893545481 1049.41837496793 37.747 1 0.08855893056136546 0.0027461291264972245 0.012247292059635232 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 133088 10226 VVQDGITLITK True NCI_RA007_Epitope_Rep4 1185.69688864157 1185.6957899358601 46.189 2 0.08855217648793931 0.0027461291264972245 0.012249130146054315 ['ENSG00000079246|ENST00000392132|XRCC5'] 5100 22049 ALLGGLVNV True PC9_epitope_Rep5 854.52255310806 854.52200496793 89.839 1 0.08855212944004988 0.0027461291264972245 0.012249142950810135 ['ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 87361 5094 QPSQPVTSA True PC9_epitope_Rep5 913.4505103666099 913.44940993586 24.619 2 0.0885397700850897 0.0027461291264972245 0.01225250716411184 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 54706 13271 KYLYVDKNF True PC9_epitope_Rep3 1188.6179100448796 1188.61627490379 56.082 3 0.0885346536215515 0.0027461291264972245 0.012253900119710536 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 40490 6761 HRDNAGYTAL True PC9_epitope_Rep1 1116.5312202987998 1116.53012993586 30.811 2 0.0885260485643638 0.0027461291264972245 0.012256243181309303 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 97414 11519 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43872496793 49.366 1 0.08852229486199269 0.0027461291264972245 0.012257265405422746 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 54743 11544 KYMEDYHQF True PC9_epitope_Rep3 1259.52810906431 1259.5264649037902 49.415 3 0.08851627278010551 0.0027461291264972245 0.012258905532540637 ['ENSG00000118898|ENST00000345988|PPL'] 76998 8922 NRGPAYGL True PC9_epitope_Rep3 846.4348007328199 846.43370993586 39.269 2 0.08851272034791688 0.0027461291264972245 0.0122598731424264 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENST00000592923.5_1_19:11649661-11650145:+|nuORF', 'ENST00000588468.1_1_19:11649742-11652758:+|nuORF', 'ENSG00000130176|ENST00000252456|CNN1'] 41494 17499 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 72.104 2 0.0885075338368775 0.0027461291264972245 0.012261285971570685 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 27810 10022 FQDDPHAGL True PC9_epitope_Rep5 998.4457593393398 998.44466993586 43.529 2 0.08850730443196674 0.0027461291264972245 0.012261348466062081 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 38994 9096 HHMGGMAGL True PC9_epitope_Rep1 909.3949271501299 909.39382993586 39.839 2 0.08850376324215214 0.0027461291264972245 0.012262313195259996 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 21910 18846 ESDPNLFVALY True H1975_Epitope_Rep2 1266.61321858726 1266.6121299358601 78.247 2 0.08850047863575448 0.0027461291264972245 0.012263208087345077 ['nc|ENSG00000143322|P42684-4|ABL2', 'nc|ENSG00000143322|P42684-7|ABL2', 'nc|ENSG00000143322|P42684-10|ABL2', 'nc|ENSG00000143322|P42684-5|ABL2', 'nc|ENSG00000143322|P42684-2|ABL2', 'nc|ENSG00000143322|P42684-6|ABL2', 'nc|ENSG00000143322|P42684-3|ABL2', 'ENSG00000143322|ENST00000502732|ABL2', 'ENST00000508127.1_1_1:179100431-179112191:-|nuORF', 'ENST00000509520.5_1_1:179086401-179112191:-|nuORF', 'ENST00000504324.1_1_1:179086401-179112191:-|nuORF', 'nc|ENSG00000143322|P42684-8|ABL2'] 117645 14069 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.50618993586 58.952 2 0.08849937051726865 0.0027461291264972245 0.012263510008508907 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 54455 14261 KYGIVQEFF True NCI_RA007_Epitope_Rep3 1129.58079626017 1129.5796899358602 63.413 2 0.08849462686557708 0.0027461291264972245 0.012264802556942353 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-3|MTCL2'] 88013 14345 QRPAVIGDVL True PC9_epitope_Rep6 1066.61349337078 1066.6123899358602 67.076 2 0.08848852044452304 0.0027461291264972245 0.012266466621763858 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 65366 7521 LRDQSAVVV True PC9_epitope_Rep4 985.5556441414899 985.55454993586 36.296 2 0.08848287254573621 0.0027461291264972245 0.012268005924281199 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 117092 20553 TVISILNTI True PC9_epitope_Rep6 972.58554728744 972.58499496793 91.785 1 0.08848242226054921 0.0027461291264972245 0.012268128654789306 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 89822 14685 RALTVPEL True PC9_epitope_Rep4 897.5283667644899 897.52726993586 64.42 2 0.08848001090478669 0.0027461291264972245 0.012268785917821056 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 30253 18816 FYVPAEPKLAF True PC9_epitope_Rep6 1280.68051030144 1280.6794099358601 85.018 2 0.08847718913338846 0.0027461291264972245 0.012269555090054231 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 90335 12334 REFEMWAP True NCI_RA007_Epitope_Rep3 1064.4749512926398 1064.47384993586 55.702 2 0.08847472088936807 0.0027461291264972245 0.012270227933425278 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 110972 10824 THANALTVM True PC9_epitope_Rep3 956.4749512926401 956.47384993586 46.606 2 0.088473388376591 0.0027461291264972245 0.01227059119092674 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 122130 11676 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.46360993586 49.901 2 0.08846843352176867 0.0027461291264972245 0.01227194202747767 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 39844 19140 HPAAFPLPV True PC9_epitope_Rep5 947.52288746123 947.5217899358599 78.657 2 0.08846089698528502 0.0027461291264972245 0.012273996974423107 ['ENSG00000108523|ENST00000262482|RNF167'] 117094 23499 TVISLLTGL True PC9_epitope_Rep1 915.56408356687 915.56298993586 95.176 2 0.0884569372901061 0.0027461291264972245 0.012275076773530328 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 92058 8622 RKSSLLTEL True NCI_RA007_Epitope_Rep4 1045.61315901761 1045.61206993586 39.947 2 0.08845380059513867 0.0027461291264972245 0.012275932206220034 ['ENSG00000126756|ENST00000333119|UXT', 'nc|ENSG00000126756|Q9UBK9-2|UXT'] 34058 22640 GLVPFLVSV True PC9_epitope_Rep4 929.5586042636099 929.55805496793 95.314 1 0.08845269577454856 0.0027461291264972245 0.012276233523922883 ['ENSG00000182481|ENST00000330459|KPNA2'] 55098 7379 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 33.764 2 0.08845171612661865 0.0027461291264972245 0.012276500709133224 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 114600 9561 TQDPTAQSL True PC9_epitope_Rep1 959.45598966987 959.45488993586 41.634 2 0.08845027136958727 0.0027461291264972245 0.01227689475634324 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 108156 17034 SYFSGSHMF True PC9_epitope_Rep2 1061.4276667470501 1061.42656993586 70.771 2 0.08844977202335422 0.0027461291264972245 0.012277030952257528 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 21397 8111 ERIMKAQAL True PC9_epitope_Rep1 1058.5906497512199 1058.58954993586 36.025 2 0.08844897060138064 0.0027461291264972245 0.012277249541847899 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 1087 9936 AEAIRILAA True H1975_Epitope_Rep2 926.5549158654999 926.55380993586 43.207 2 0.08844807617026179 0.0027461291264972245 0.012277493504227488 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 18827 8619 ELDPDNETY True H1975_Epitope_Rep1 1094.44039917538 1094.4398749679299 38.08 1 0.08844044185622685 0.0027461291264972245 0.012279576003484075 ['ENSG00000104969|ENST00000221566|SGTA'] 103690 5773 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 27.597 2 0.08843833969106246 0.0027461291264972245 0.012280149493745526 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 47832 20459 IYGYVAEQF True PC9_epitope_Rep3 1088.5178616504397 1088.51727496793 83.951 1 0.08843742733365065 0.0027461291264972245 0.012280398401230684 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 127152 9025 VLTVINQTQK True PC9_epitope_Rep5 1142.66592286646 1142.66482993586 39.66 2 0.08842288840796689 0.0027461291264972245 0.012284365524499973 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 108281 7006 SYIGGHEGL True NCI_RA007_Epitope_Rep3 931.43994568291 931.43884993586 34.667 2 0.08842129267396044 0.0027461291264972245 0.012284801013726773 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 70413 12579 LVTSINHAL True PC9_epitope_Rep5 966.5498304850599 966.54872993586 53.384 2 0.08841766605078823 0.0027461291264972245 0.012285790803927445 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 26894 21504 FLDGNELTL True PC9_epitope_Rep2 1020.51277627 1020.51227496793 88.183 1 0.08841694976054136 0.0027461291264972245 0.012285986305182163 ['ENSG00000213719|ENST00000375784|CLIC1'] 18123 15492 EIIQRIENV True PC9_epitope_Rep5 1112.61897267404 1112.6178699358602 64.599 2 0.08841613491934415 0.0027461291264972245 0.012286208708093417 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 116919 7041 TVFSHAQTV True PC9_epitope_Rep6 988.4977949121999 988.49668993586 36.088 2 0.08841065700511656 0.0027461291264972245 0.012287703949785326 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 17975 4827 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 23.657 3 0.08841028138834908 0.0027461291264972245 0.012287806483766171 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 86987 4704 QLYWSHPRK True NCI_RA007_Epitope_Rep4 1213.6356257976897 1213.63399490379 24.524 3 0.08840136982343452 0.0027461291264972245 0.01229023935515425 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 39043 11353 HHSGNTYFL True PC9_epitope_Rep1 1074.48829285766 1074.4871899358602 48.547 2 0.0883970514309235 0.0027461291264972245 0.01229141844686305 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 14972 11298 DYFEQYGK True PC9_epitope_Rep6 1048.4501760134401 1048.44906993586 54.474 2 0.08839366986749678 0.0027461291264972245 0.012292341821840606 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 106754 3437 STYPAQNGQVK True NCI_RA007_Epitope_Rep4 1191.5884008217497 1191.58730993586 19.121 2 0.08839289847978017 0.0027461291264972245 0.012292552467352117 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 89211 14710 QVTNEFQTV True PC9_epitope_Rep3 1064.51383889916 1064.51274993586 61.722 2 0.08839191308682683 0.0027461291264972245 0.012292821556974464 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 8238 9275 ATGENLPRV True PC9_epitope_Rep5 955.5086939490699 955.50758993586 40.625 2 0.08839164714477972 0.0027461291264972245 0.012292894180981449 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 37805 12146 GYFGNPQKF True PC9_epitope_Rep6 1056.50288029264 1056.5017899358602 58.071 2 0.0883891868284561 0.0027461291264972245 0.012293566068498683 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 39050 11349 HHSGNTYFL True PC9_epitope_Rep5 1074.48829285766 1074.4871899358602 48.651 2 0.0883836104582396 0.0027461291264972245 0.012295089047270308 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 37500 22224 GVVDIFQTV True PC9_epitope_Rep3 976.52294703088 976.52184993586 90.769 2 0.08837538632343539 0.0027461291264972245 0.012297335490070565 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 1201 5723 AECPNPSTP True H1975_Epitope_Rep2 914.38038220146 914.37983496793 27.012 1 0.08837146058990862 0.0027461291264972245 0.01229840795063386 ['ENSG00000072786|ENST00000176763|STK10', 'ENST00000517360.1_1_5:171471888-171480055:-|nuORF'] 135394 21036 WHDSDWIL True PC9_epitope_Rep3 1070.48214484806 1070.48104993586 86.193 2 0.08837131889225013 0.0027461291264972245 0.012298446662287552 ['ENSG00000107625|ENST00000373585|DDX50'] 9716 16218 AYGNVFSAF True NCI_RA007_Epitope_Rep3 974.4497820906199 974.44868993586 71.484 2 0.08836888310329484 0.0027461291264972245 0.012299112135308416 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 96338 12402 RYSSMAASF True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 52.702 2 0.08835348097687316 0.0027461291264972245 0.012303320881842356 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 99128 13221 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 56.132 2 0.08834768436105059 0.0027461291264972245 0.012304905202948696 ['ENSG00000132646|ENST00000379143|PCNA'] 24567 7368 FAHGNAEL True PC9_epitope_Rep5 857.40316625137 857.40206993586 33.298 2 0.08833909005354756 0.0027461291264972245 0.0123072545390777 ['ENSG00000122299|ENST00000355758|ZC3H7A', 'nc|ENSG00000122299|Q8IWR0-2|ZC3H7A'] 97401 8076 SEDVPYTAA True H1975_Epitope_Rep2 951.41854153199 951.4179949679301 36.011 1 0.0883311366612689 0.0027461291264972245 0.012309429052424811 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 78484 7851 NYNNQSSNF True PC9_epitope_Rep2 1086.4366512076201 1086.43554993586 35.568 2 0.08832260020518519 0.0027461291264972245 0.012311763383359434 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 4061 12892 AHLDATTVL True PC9_epitope_Rep2 939.5025459394701 939.50144993586 54.886 2 0.08832176503002123 0.0027461291264972245 0.012311991788087217 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 117296 12745 TVMDSKIVQV True PC9_epitope_Rep6 1118.60054572858 1118.59944993586 60.511 2 0.08831457889463028 0.0027461291264972245 0.012313957226610987 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 74857 18635 NHFPGSFQI True PC9_epitope_Rep5 1045.49812926537 1045.4970299358602 76.706 2 0.08831228081270238 0.0027461291264972245 0.012314585824317268 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 128642 13106 VPVEQAVSV True PC9_epitope_Rep4 926.5072969667398 926.50618993586 58.306 2 0.08831079118702347 0.0027461291264972245 0.012314993299997808 ['ENSG00000131899|ENST00000316843|LLGL1'] 25753 10625 FETAVAPNV True H1975_Epitope_Rep2 946.4759968384599 946.47488993586 45.892 2 0.08830977615384857 0.0027461291264972245 0.01231527096183497 ['ENSG00000157933|ENST00000378536|SKI'] 106694 8126 STTQVVGILK True NCI_RA007_Epitope_Rep3 1044.6179100448799 1044.6168099358601 39.069 2 0.0883077470472245 0.0027461291264972245 0.012315826040704967 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 44154 22467 IITDFDMTL True PC9_epitope_Rep5 1067.52089842555 1067.5198099358602 91.422 2 0.08830613896081771 0.0027461291264972245 0.012316265962805838 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF', 'ENST00000461851.1_1_7:33061643-33066527:-|nuORF', 'ENST00000464840.5_1_7:33063600-33075596:-|nuORF'] 105470 9963 SRVTNNVVL True PC9_epitope_Rep1 1000.56654317836 1000.56544993586 43.187 2 0.08830196857533545 0.0027461291264972245 0.012317406918892786 ['ENSG00000104147|ENST00000220514|OIP5'] 62127 2823 LLEGEESR True NCI_RA007_Epitope_Rep1 931.4610750503099 931.45996993586 14.81 2 0.08829556466708074 0.0027461291264972245 0.012319159128319514 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 88994 20691 QVIQGLEAL True PC9_epitope_Rep1 969.5494961318898 969.5489449679301 84.412 1 0.0882942962527443 0.0027461291264972245 0.012319506214251368 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1', 'KLC1|p.G290Afs*11|1|0.15|ENSG00000126214|chr14:103669580-103669580|G/-|frameshift_variant'] 25216 12359 FDEILEASD True H1975_Epitope_Rep1 1037.4553209635299 1037.45477496793 52.57 1 0.08828940245973015 0.0027461291264972245 0.012320845426902177 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM'] 103840 7635 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 34.737 2 0.08828673185685905 0.0027461291264972245 0.012321576309672337 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 9724 21620 AYGNVFSAF True PC9_epitope_Rep2 974.4497820906199 974.44868993586 88.635 2 0.0882860100886714 0.0027461291264972245 0.012321773848105802 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 9042 10756 AVHETLVAV True PC9_epitope_Rep4 937.5232813840498 937.52218993586 49.13 2 0.08827945206617506 0.0027461291264972245 0.012323568829454281 ['ENSG00000141873|ENST00000269740|SLC39A3'] 100192 23657 SIVDFLITA True PC9_epitope_Rep3 977.5433481222899 977.54224993586 96.283 2 0.08826572927185303 0.002773074902212622 0.012327325663378328 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 103895 15042 SQADVIPAV True PC9_epitope_Rep6 898.4759968384599 898.47488993586 69.898 2 0.08826505530088166 0.002773074902212622 0.012327510201555392 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 74216 6801 NEGVATYAA True H1975_Epitope_Rep3 894.4083112014598 894.40776496793 31.113 1 0.08826452604830196 0.002773074902212622 0.012327655116608495 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 120172 4332 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 21.777 2 0.08826394298109327 0.002773074902212622 0.012327814768549212 ['ENSG00000155506|ENST00000518297|LARP1'] 69924 16510 LVKDVFISA True PC9_epitope_Rep3 990.57498260374 990.57388993586 68.643 2 0.08825291069311923 0.002773074902212622 0.012330835931115943 ['ENSG00000008018|ENST00000262193|PSMB1'] 114341 10397 TPRPVIVEP True PC9_epitope_Rep4 1006.5811306133398 1006.58002993586 47.695 2 0.08824952994570785 0.002773074902212622 0.012331761879747213 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 23782 18583 EYGVIRDVL True PC9_epitope_Rep2 1062.57095985246 1062.5698699358602 76.832 2 0.08824907480290488 0.002773074902212622 0.012331886543250022 ['nc|ENSG00000049239|O95479-2|H6PD', 'ENSG00000049239|ENST00000377403|H6PD'] 87786 16834 QRDIAYVVL True PC9_epitope_Rep4 1075.6025943339098 1075.6014899358602 72.729 2 0.08824111823696795 0.002773074902212622 0.01233406603703635 ['ENSG00000108510|ENST00000397786|MED13', 'MED13|p.G1364V|1|0.5|ENSG00000108510|chr17:61968135-61968135|C/A|missense_variant'] 79241 5836 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 29.935 2 0.08823720460316298 0.002773074902212622 0.012335138208475128 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 62964 13729 LLPHVVPGTT True PC9_epitope_Rep2 1032.59678067748 1032.59568993586 58.097 2 0.08822439969108946 0.002773074902212622 0.012338646832353174 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 110353 7882 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 35.27 2 0.08822392302891019 0.002773074902212622 0.012338777458890178 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 42648 3967 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 20.387 2 0.08822385731326696 0.002773074902212622 0.012338795467987856 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 39243 18457 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58057496793 76.016 1 0.08822218017157485 0.002773074902212622 0.012339255090069428 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 29924 10756 FVYDEPGHAV True PC9_epitope_Rep6 1132.5189242795998 1132.5178299358602 52.199 2 0.08821077341652617 0.002773074902212622 0.012342381549887491 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 129032 14150 VQMVITEAQKV True PC9_epitope_Rep5 1244.6798586784398 1244.6787699358601 59.439 2 0.0881947612368522 0.002773074902212622 0.012346771565836974 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 116758 17459 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54427496793 72.448 1 0.0881937368203121 0.002773074902212622 0.012347052477539233 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 47962 19797 IYIWDLNNF True NCI_RA007_Epitope_Rep3 1196.5866099165999 1196.58550993586 86.277 2 0.08818525538430377 0.002773074902212622 0.012349378457355205 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 21553 10321 ERNNTRLLL True PC9_epitope_Rep5 1127.64110510095 1127.63944490379 44.685 3 0.08818386062073247 0.002773074902212622 0.01234976100200814 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA2|p.Q162Sfs*16|1|0.19|ENSG00000139220|chr12:81445642-81445642|G/-|frameshift_variant', 'ENST00000602716.5_1_19:49631560-49640169:+|nuORF', 'ENST00000421230.6_1_19:49631605-49643027:+|nuORF', 'nc|ENSG00000143847|O75335|PPFIA4', 'PPFIA3|p.Q899Hfs*20|1|0.28|ENSG00000177380|chr19:49142956-49142968|GGAGATGGTCTCG/-|frameshift_variant', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'ENSG00000143847|ENST00000295706|PPFIA4'] 21129 5721 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 27.396 2 0.08817864289813224 0.002773074902212622 0.012351192176699414 ['ENSG00000092148|ENST00000399332|HECTD1'] 96660 10545 SAIQSISHV True PC9_epitope_Rep5 940.4977949122 940.49668993586 45.55 2 0.08817730079937101 0.002773074902212622 0.012351560327727709 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 44150 5511 IISSIEQK True NCI_RA007_Epitope_Rep2 916.5229470308799 916.52184993586 26.051 2 0.08815586199019337 0.002773074902212622 0.012357442611521361 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 120623 11035 VEIAYSDVA True H1975_Epitope_Rep3 965.4705771048499 965.47002496793 47.536 1 0.08815495482001359 0.002773074902212622 0.012357691575125533 ['ENSG00000169504|ENST00000374379|CLIC4'] 39934 7316 HPIDDLQSA True PC9_epitope_Rep4 994.47197408718 994.47086993586 35.47 2 0.08814883553857468 0.002773074902212622 0.01235937107327442 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'ENSG00000213186|ENST00000309784|TRIM59'] 138516 11584 YHSSGGLEL True PC9_epitope_Rep3 961.4505103666099 961.44940993586 49.572 2 0.08814738389945298 0.002773074902212622 0.012359769521823598 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 115115 11535 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 49.248 2 0.08814565448116186 0.002773074902212622 0.012360244231542214 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 131229 15898 VTETNVFFY True H1975_Epitope_Rep2 1118.5284263341398 1118.52732993586 66.353 2 0.08814481672582283 0.002773074902212622 0.012360474194016242 ['ENSG00000176986|ENST00000345254|SEC24C', 'nc|ENSG00000176986|P53992-2|SEC24C'] 1533 10821 AEEPGTFAV True H1975_Epitope_Rep3 919.4287122928699 919.42816496793 46.702 1 0.08814250063119541 0.002773074902212622 0.012361109979243048 ['ENSG00000188419|ENST00000357749|CHM', 'CHM|p.R488W|1|0.55|ENSG00000188419|chrX:85894236-85894236|G/A|missense_variant'] 71419 21083 LYTEAIKFF True PC9_epitope_Rep5 1130.60119735158 1130.60010993586 86.158 2 0.08814178962899025 0.002773074902212622 0.012361305160840703 ['nc|ENSG00000038532|Q2KHT3-2|CLEC16A', 'ENSG00000038532|ENST00000409790|CLEC16A'] 40127 13117 HPYLPINSA True PC9_epitope_Rep1 1010.51853035678 1010.51742993586 55.322 2 0.08813767796227932 0.0027879421502003832 0.012362433936903122 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 6333 9426 APRPTIINA True PC9_epitope_Rep5 951.5501648382299 951.54906993586 41.212 2 0.08813121628835041 0.0027879421502003832 0.012364208057282165 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 89481 18590 QYGGDLTNTF True PC9_epitope_Rep2 1114.49310345458 1114.49200993586 76.858 2 0.0881301108423935 0.0027879421502003832 0.012364511593156534 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 128220 12256 VPNKFLVTA True PC9_epitope_Rep4 987.5753169569099 987.57420993586 54.961 2 0.08812560589513295 0.0027879421502003832 0.012365748644643867 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 4064 13560 AHLDATTVL True PC9_epitope_Rep5 939.5025459394701 939.50144993586 57.181 2 0.08812465758379424 0.0027879421502003832 0.012366009064350519 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 141266 6934 YTDKIM[Oxidation]TY True H1975_Epitope_Rep1 1049.47394861357 1049.47284993586 31.715 2 0.08812195563788426 0.0027879421502003832 0.012366751085319186 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 99692 7392 SIHENFSQA True PC9_epitope_Rep1 1031.4672230599099 1031.4661299358602 33.247 2 0.0881185480510326 0.0027879421502003832 0.012367686952650612 ['ENSG00000125633|ENST00000376300|CCDC93'] 1970 11947 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 50.958 1 0.08811562702276954 0.0027879421502003832 0.012368489243680541 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 436 19930 AALPNVYEV True PC9_epitope_Rep3 974.5072969667399 974.50618993586 81.904 2 0.08810960175231491 0.0027879421502003832 0.01237014430263825 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 85857 12298 QHFDSVM[Oxidation]QL True PC9_epitope_Rep1 1119.5018946969099 1119.5007899358602 52.159 2 0.08810464265887787 0.0027879421502003832 0.012371506654350625 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 91689 4355 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 23.362 2 0.0881039259567968 0.0027879421502003832 0.01237170355695748 ['ENSG00000100292|ENST00000216117|HMOX1'] 141345 11873 YTDTYTEAYM True H1975_Epitope_Rep2 1256.4907204960798 1256.4896299358602 50.748 2 0.08808188418732553 0.0027879421502003832 0.01237776063136586 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 73224 14769 MSDLNVPEQLY True H1975_Epitope_Rep2 1307.6067533078299 1307.6056499358601 61.967 2 0.08806759711033627 0.0027879421502003832 0.012381688213564513 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 2766 5680 AETPGTVSP True H1975_Epitope_Rep3 857.41306222873 857.4125149679301 26.876 1 0.0880673832341772 0.0027879421502003832 0.012381747018030466 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 40197 12035 HQFPFSSAL True NCI_RA007_Epitope_Rep3 1032.50288029264 1032.5017899358602 54.465 2 0.08805953364755126 0.0027879421502003832 0.012383905415592209 ['ENSG00000127249|ENST00000342695|ATP13A4', 'nc|ENSG00000127249|Q4VNC1-2|ATP13A4'] 104822 10437 SRAEDYEVL True PC9_epitope_Rep6 1080.50875351872 1080.5076499358602 50.899 2 0.08805282967427407 0.0027879421502003832 0.012385749085659904 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 48541 20012 KALQFLEEV True PC9_epitope_Rep1 1075.5913609438699 1075.59026993586 81.802 2 0.08804798574868221 0.0027879421502003832 0.01238708138244725 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 88206 10275 QRYSEDRIGL True PC9_epitope_Rep1 1235.6258489596298 1235.62420490379 44.407 3 0.0880313815179304 0.0027879421502003832 0.012391649317796861 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 76038 14581 NMDNMFESY True H1975_Epitope_Rep2 1149.41069635357 1149.4095899358601 61.242 2 0.08803032422264487 0.0027879421502003832 0.01239194024069569 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 72941 18350 MQAERIFSEV True PC9_epitope_Rep3 1208.5859582936 1208.58486993586 75.794 2 0.08802482573399681 0.0027879421502003832 0.012393453295977207 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 87377 20388 QPTEVVNIL True PC9_epitope_Rep5 1011.5600608155898 1011.55896993586 83.458 2 0.08801877182350801 0.0027879421502003832 0.012395119392133846 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENST00000602534.1_1_13:39603416-39611379:-|nuORF'] 79275 8975 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 39.466 2 0.08801219635199525 0.0027879421502003832 0.012396929266692518 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 72838 7953 MPNGDHIVSA True PC9_epitope_Rep4 1039.47567956863 1039.4745899358602 38.033 2 0.08801177016978468 0.0027879421502003832 0.012397046580403609 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 90660 8545 REQDLPLAEA True H1975_Epitope_Rep2 1140.5775017848798 1140.57640993586 37.824 2 0.08800811530042613 0.0027879421502003832 0.012398052686768087 ['ENSG00000169895|ENST00000380155|SYAP1'] 78659 11375 NYVEVTRKW True PC9_epitope_Rep5 1193.61930702721 1193.61766490379 48.75 3 0.08800041372576538 0.0027879421502003832 0.01240017301589014 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 131706 13562 VTNSVFHEI True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 57.457 2 0.08799551298618033 0.0027879421502003832 0.012401522422258763 ['nc|ENSG00000074416|Q99685-2|MGLL', 'nc|ENSG00000074416|Q99685|MGLL', 'ENSG00000074416|ENST00000265052|MGLL'] 7243 17309 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.52387496793 71.396 1 0.08799453266858971 0.0027879421502003832 0.012401792366895337 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 29165 11430 FTQGHIVEV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 49.285 2 0.08796534618073815 0.0027879421502003832 0.012409831831068571 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 71939 7521 [Acetylation]-M[Oxidation]EQVNELK True H1975_Epitope_Rep3 1047.49066162317 1047.4895699358601 33.909 2 0.08796147588968346 0.0027879421502003832 0.012410898278354102 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'ENST00000540736.1_1_11:63953733-63960840:+|nuORF'] 36691 23104 GVISGLFEL True PC9_epitope_Rep2 933.5171333744499 933.51658496793 94.36 1 0.08795279688944692 0.0027879421502003832 0.012413290065912668 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 11868 15694 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52760993586 65.643 2 0.0879455519417973 0.0027879421502003832 0.012415286985844138 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 23941 12400 EYLLKVNEI True NCI_RA007_Epitope_Rep4 1119.61757569171 1119.61646993586 54.693 2 0.08794215566448561 0.0027879421502003832 0.012416223203850814 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 21899 16471 ESDLPDELLY True H1975_Epitope_Rep1 1192.54994962436 1192.54937496793 68.724 1 0.08794160944432897 0.0027879421502003832 0.012416373781154831 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 33168 18378 GIVGGLSTV True PC9_epitope_Rep3 801.4596184983301 801.4590749679301 75.9 1 0.08794117030492517 0.0027879421502003832 0.012416494840602638 ['ENSG00000165678|ENST00000372134|GHITM'] 32135 6169 GETVPAPSA True H1975_Epitope_Rep3 827.40249754503 827.40194496793 28.742 1 0.08793606337409492 0.0027879421502003832 0.012417902772038058 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 107741 5699 SVSNVVITK True NCI_RA007_Epitope_Rep1 945.54949613189 945.54838993586 26.226 2 0.0879317137616852 0.0027879421502003832 0.01241910203698705 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 25544 20257 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54732993586 84.267 2 0.08792614904561517 0.0027879421502003832 0.012420636486936122 ['ENSG00000125356|ENST00000371437|NDUFA1'] 97707 10941 SEIDQVVPAA True H1975_Epitope_Rep3 1027.5185899264297 1027.51748993586 47.171 2 0.08792547748284886 0.0027879421502003832 0.01242082167999998 ['ENSG00000162607|ENST00000339950|USP1'] 66046 11785 LSEGVTISY True H1975_Epitope_Rep2 967.4862271689901 967.48512993586 50.405 2 0.08792317251211385 0.0027879421502003832 0.012421457328569101 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 35538 5153 GSSSVILEK True NCI_RA007_Epitope_Rep4 918.5022115863 918.50110993586 26.344 2 0.08792307177911672 0.0027879421502003832 0.012421485108704972 ['ENSG00000177409|ENST00000318238|SAMD9L'] 99165 11598 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 55.727 2 0.08791857613295422 0.0027879421502003832 0.012422724977290968 ['ENSG00000132646|ENST00000379143|PCNA'] 127195 23812 VLVNDFFLV True PC9_epitope_Rep1 1064.5906326678798 1064.59007496793 96.39 1 0.0879100792221621 0.0027879421502003832 0.012425068686576845 ['ENSG00000104408|ENST00000220849|EIF3E'] 31736 5512 GEGSPPAVAA True H1975_Epitope_Rep2 854.4133965818999 854.41284496793 26.214 1 0.08790592161024122 0.0027879421502003832 0.012426215635922765 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant'] 60597 7910 LHHDDPEVL True PC9_epitope_Rep3 1073.51417325233 1073.5130699358601 35.407 2 0.08790581176480616 0.0027879421502003832 0.012426245940046361 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 79257 9108 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 39.885 2 0.08790476234140651 0.0027879421502003832 0.012426535458157372 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 133990 7089 VYISEHEHF True NCI_RA007_Epitope_Rep4 1159.5298233164701 1159.5281849037901 33.89 3 0.0879038288870732 0.0027879421502003832 0.012426792987723107 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 139986 4392 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 23.338 2 0.08790346592131222 0.0027879421502003832 0.012426893127260398 ['ENSG00000146648|ENST00000275493|EGFR'] 23113 14996 EVISKLYAV True PC9_epitope_Rep4 1020.5855472874398 1020.58444993586 65.621 2 0.08788960175399144 0.0027879421502003832 0.01243071871774074 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 30580 8710 GAIGSPVRL True H1975_Epitope_Rep1 868.51305105352 868.51194993586 38.429 2 0.08788573615863893 0.0027879421502003832 0.012431785563865677 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant'] 86673 19345 QLIDIIHTA True PC9_epitope_Rep3 1022.5760452329 1022.57494993586 79.632 2 0.08787270876289124 0.0027879421502003832 0.012435381565647965 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 71365 14324 LYRLQFNEF True NCI_RA007_Epitope_Rep4 1228.6240580544797 1228.62296993586 62.403 2 0.08786790835287268 0.0027879421502003832 0.012436706888770974 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 75119 13389 NHYAEIQVV True PC9_epitope_Rep1 1071.53490869691 1071.53380993586 56.361 2 0.08785896611305899 0.0027879421502003832 0.012439176066261225 ['ENSG00000100220|ENST00000216038|RTCB'] 38880 11938 HHEITYVAL True PC9_epitope_Rep2 1081.55564414149 1081.5545499358602 51.242 2 0.0878539802083084 0.0027879421502003832 0.012440553001046024 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 28405 11754 FRYTAGTPY True PC9_epitope_Rep2 1074.5134449763398 1074.5123499358601 50.544 2 0.08783435427741433 0.0027879421502003832 0.012445974403980643 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 108429 22820 SYLPFTEAF True PC9_epitope_Rep5 1073.5069626135698 1073.50637496793 92.77 1 0.08782957699343824 0.0027879421502003832 0.012447294402817723 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 31981 6448 GEQEGAMVAA True H1975_Epitope_Rep3 961.4174959861698 961.41694496793 29.776 1 0.08782736728628011 0.0027879421502003832 0.012447905005930784 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 41025 18416 HTIDTILTV True PC9_epitope_Rep5 1011.56006081559 1011.55896993586 75.857 2 0.08782598391270517 0.0027879421502003832 0.012448287284648663 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 118309 18517 TYLSIIHSL True PC9_epitope_Rep6 1045.58079626017 1045.5796899358602 83.867 2 0.08782321884559391 0.0027879421502003832 0.012449051411046137 ['ENSG00000133030|ENST00000651222|MPRIP'] 95359 12918 RVVDLLNQA True PC9_epitope_Rep6 1026.5821932425 1026.58108993586 61.225 2 0.08782151682087815 0.0027879421502003832 0.012449521787658731 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 7041 19644 AQQELKLLL True PC9_epitope_Rep1 1054.6386454894598 1054.63754993586 80.385 2 0.08781992523674204 0.0027879421502003832 0.01244996165776688 ['ENSG00000119041|ENST00000263956|GTF3C3'] 75000 5455 NHQKDIQVL True PC9_epitope_Rep4 1093.58800689893 1093.5869099358601 27.72 2 0.08781199112013663 0.0027879421502003832 0.012452154648427574 ['ENSG00000153561|ENST00000283632|RMND5A'] 1196 6527 AEAVAHFEA True H1975_Epitope_Rep2 943.43994568291 943.43884993586 30.021 2 0.0878095579450661 0.0027879421502003832 0.012452827251342943 ['ENSG00000177051|ENST00000317683|FBXO46'] 117975 22794 TYDEIFYTL True PC9_epitope_Rep5 1163.5386566646698 1163.5375499358602 92.668 2 0.08780344773154915 0.0027879421502003832 0.012454516449725542 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF'] 12483 10630 DKDEIPTISSY True H1975_Epitope_Rep3 1266.59796244594 1266.59686993586 45.96 2 0.08780104561011381 0.0027879421502003832 0.012455180587174887 ['ENSG00000227729|ENST00000557640|RD3L'] 103807 10245 SPVYVGRVV True PC9_epitope_Rep6 974.5549158654999 974.55380993586 50.07 2 0.0878002047604132 0.0027879421502003832 0.012455413072821003 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 36617 21515 GVIAGLNVL True PC9_epitope_Rep2 854.52255310806 854.52200496793 88.225 1 0.08779554588036735 0.0027879421502003832 0.012456701275889 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 69568 16806 LVDEWLDSY True H1975_Epitope_Rep2 1138.51825557326 1138.51767496793 69.893 1 0.08779287943626116 0.0027879421502003832 0.012457438617295537 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 28566 11552 FSEVNMQEY True H1975_Epitope_Rep2 1145.46992548185 1145.4688299358602 49.496 2 0.08779262488309926 0.0027879421502003832 0.012457509010044929 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 28752 13194 FSSPHLVQV True PC9_epitope_Rep6 1012.5341804209198 1012.53308993586 62.395 2 0.08779108412368442 0.0027879421502003832 0.012457935091304492 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 53892 8131 KTLTGKTITL True PC9_epitope_Rep2 1074.6648602373 1074.66376993586 36.633 2 0.08778801861388189 0.0027879421502003832 0.012458782867611894 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 126303 20621 VLIENVASL True PC9_epitope_Rep2 956.5542471591599 956.55314993586 84.752 2 0.08778666905367061 0.0027879421502003832 0.012459156109970027 ['ENSG00000176153|ENST00000389614|GPX2'] 11577 21579 DGAGFLINLID True H1975_Epitope_Rep3 1146.5920892198599 1146.59098993586 90.168 2 0.087779547750057 0.0027879421502003832 0.012461125794673344 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 36615 21780 GVIAGLNVL True PC9_epitope_Rep1 854.52255310806 854.52144993586 88.605 2 0.08777765369743139 0.0027879421502003832 0.012461649721069655 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 90663 4625 REQEAREPVL True H1975_Epitope_Rep2 1225.6414990237697 1225.6398449037902 22.891 3 0.08777653973325399 0.0027879421502003832 0.01246195787176511 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 87897 6564 QRIDSDDAL True PC9_epitope_Rep6 1031.4883524273098 1031.48724993586 33.943 2 0.08777386951960459 0.0027879421502003832 0.012462696549757235 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 140410 11050 YRFGDSQQL True PC9_epitope_Rep6 1112.5250722892 1112.5239699358601 53.414 2 0.08776595684488044 0.0027879421502003832 0.012464885725477779 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 21597 18747 ERQRWLVAL True PC9_epitope_Rep5 1169.6669259259697 1169.66527490379 77.122 3 0.08776471408461861 0.0027879421502003832 0.012465229589177647 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 108773 8624 SYSSTFHSL True NCI_RA007_Epitope_Rep4 1027.46107505031 1027.45996993586 39.955 2 0.08776315958713268 0.0027879421502003832 0.012465659721151925 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 85801 4690 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 25.414 2 0.08775914384344115 0.0027879421502003832 0.012466770948799014 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 35002 5930 GQTGVIRSV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 29.736 2 0.08775239303003438 0.0027879421502003832 0.012468639229604254 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 38343 7376 HEIEGTGLP True H1975_Epitope_Rep2 951.4661604307499 951.46506993586 33.312 2 0.08774989669295148 0.0027879421502003832 0.012469330155318193 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 133472 11166 VWAAVPGKTF True NCI_RA007_Epitope_Rep4 1074.58621599378 1074.5851099358601 49.824 2 0.08774530932161684 0.0027879421502003832 0.012470599922971356 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 23940 17524 EYLKVDAQF True PC9_epitope_Rep5 1111.5549754351498 1111.5538699358601 72.412 2 0.08774485141350243 0.0027879421502003832 0.01247072667696783 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF', 'ENST00000466052.1_1_1:33256818-33263474:-|nuORF', 'ENST00000470377.1_1_1:33256708-33272178:-|nuORF'] 97343 6904 SECGKTFTV True H1975_Epitope_Rep2 970.44298245802 970.44188993586 31.476 2 0.08773990969251745 0.0027879421502003832 0.012472094677020125 ['ENSG00000170949|ENST00000683776|ZNF160'] 47405 21493 IVLDRLIEL True PC9_epitope_Rep3 1082.66994561774 1082.6688499358602 87.965 2 0.08773833092431144 0.0027879421502003832 0.01247253175198978 ['ENSG00000129083|ENST00000439561|COPB1'] 90434 6111 REINTILKA True NCI_RA007_Epitope_Rep3 1056.62914343492 1056.6280499358602 31.027 2 0.08773715021394465 0.0027879421502003832 0.0124728586358648 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'nc|ENSG00000008128|Q9UQ88-9|CDK11A', 'ENST00000598846.1_1_1:1635046-1639660:-|nuORF', 'ENST00000474916.1_1_1:1636243-1639664:-|nuORF', 'ENST00000468800.5_1_1:1635923-1638967:-|nuORF', 'ENST00000492390.5_1_1:1636243-1639660:-|nuORF'] 11888 6325 DHINGRVL True PC9_epitope_Rep1 922.49846361854 922.49736993586 29.141 2 0.08773436577243804 0.0027879421502003832 0.012473629550452123 ['ENSG00000196878|ENST00000356082|LAMB3'] 111897 15566 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 65.024 2 0.08772955876065623 0.0027879421502003832 0.012474960549961925 ['ENSG00000213719|ENST00000375784|CLIC1'] 87305 10700 QPQPQPYAV True PC9_epitope_Rep4 1026.5134449763398 1026.51287496793 48.91 1 0.08772225564417856 0.0027879421502003832 0.012476982945237353 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 140706 7304 YSADREDLY True H1975_Epitope_Rep2 1130.48801807414 1130.48747496793 33.032 1 0.08771719949110211 0.0027879421502003832 0.01247838328772823 ['ENSG00000174231|ENST00000304992|PRPF8'] 8394 7614 ATLQEALAH True NCI_RA007_Epitope_Rep4 952.4977949121999 952.49668993586 35.939 2 0.08771678775990804 0.0027879421502003832 0.012478497326545625 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 3954 6811 AHDPAGPSL True PC9_epitope_Rep5 863.41373093507 863.41262993586 31.17 2 0.08771250161158976 0.0027879421502003832 0.012479684536433517 ['ENSG00000183779|ENST00000331569|ZNF703'] 53091 9529 KPQPSILQA True PC9_epitope_Rep1 980.5654805491998 980.56438993586 41.51 2 0.08771225393900843 0.0027879421502003832 0.012479753141923417 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 32171 6201 GEVPESPEA True H1975_Epitope_Rep2 913.4028914678499 913.40234496793 28.824 1 0.08771076182613577 0.0027879421502003832 0.012480166465837016 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 107346 13461 SVLGKVNEI True PC9_epitope_Rep5 957.54949613189 957.54838993586 56.796 2 0.08770843842483679 0.0027879421502003832 0.012480810087191407 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 34782 19843 GQGEVLVYV True PC9_epitope_Rep2 962.5072969667398 962.5067449679301 81.717 1 0.08770449874548802 0.0027879421502003832 0.012481901516447628 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 8235 9374 ATGENLPRV True PC9_epitope_Rep3 955.5086939490699 955.50758993586 40.996 2 0.08770248940304738 0.0027879421502003832 0.012482458209422882 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 38200 18352 HDVLATLL True PC9_epitope_Rep4 880.5018176634801 880.50072993586 78.657 2 0.08769606840271696 0.0027879421502003832 0.012484237319563149 ['ENSG00000115524|ENST00000335508|SF3B1'] 27468 15528 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.4522749679301 64.883 1 0.08768286798578086 0.0027879421502003832 0.012487895600635573 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 106849 6126 SVASPFTSK True NCI_RA007_Epitope_Rep3 922.4759968384601 922.47488993586 31.084 2 0.08767854415284908 0.0027879421502003832 0.012489094100692944 ['ENSG00000187527|ENST00000342358|ATP13A5', 'ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4'] 111549 9659 TIAPALVSK True PC9_epitope_Rep1 898.5487678559 898.54766993586 42.009 2 0.08767733863176781 0.0027879421502003832 0.012489428271972185 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 31834 10916 GEISALTAEA True H1975_Epitope_Rep2 960.47639076128 960.47584496793 47.019 1 0.0876572419106383 0.0027879421502003832 0.012495000340400327 ['ENSG00000125968|ENST00000376112|ID1'] 39239 16594 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 71.804 2 0.08765534728879222 0.0027879421502003832 0.012495525769142571 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 107642 6455 SVQEYFVRK True NCI_RA007_Epitope_Rep3 1154.6084079903396 1154.6067749037902 32.417 3 0.087651373871203 0.0027879421502003832 0.012496627770660242 ['ENSG00000163781|ENST00000260810|TOPBP1'] 113733 13774 TMAKESSIIGV True PC9_epitope_Rep1 1134.59546034814 1134.5943699358602 57.828 2 0.08762979942508367 0.0027879421502003832 0.012502612904560433 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 71794 19286 MEGLSWLV True H1975_Epitope_Rep2 933.4629896266099 933.4624449679301 80.045 1 0.08762099111115547 0.0027879421502003832 0.012505057264851639 ['ENST00000378119.8_1_6:24720562-24720727:-|nuORF'] 69573 11371 LVDGDTLSY True H1975_Epitope_Rep2 981.46549172441 981.46494496793 48.788 1 0.08760784330010053 0.0027879421502003832 0.012508706701035892 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 1168 7088 AEAPPSVAP True H1975_Epitope_Rep3 837.4232329896099 837.4226849679301 32.231 1 0.08760712265058891 0.0027879421502003832 0.012508906760685754 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 31772 6905 GEIASFDKA True H1975_Epitope_Rep3 936.4552613938799 936.45416993586 31.521 2 0.08760081155352142 0.0027879421502003832 0.012510658914610688 ['ENSG00000034510|ENST00000233143|TMSB10'] 85052 10177 QEIKELMAEA True H1975_Epitope_Rep2 1160.5747249035599 1160.57362993586 44.148 2 0.08760067709120722 0.0027879421502003832 0.012510696247989617 ['ENSG00000109079|ENST00000226225|TNFAIP1'] 42977 7883 IESRTLAIA True NCI_RA007_Epitope_Rep1 972.5603951687599 972.55928993586 34.656 2 0.08759960368930331 0.0027879421502003832 0.012510994281139384 ['ENSG00000147872|ENST00000276914|PLIN2'] 43781 14548 IHNQDLLL True PC9_epitope_Rep4 964.5341804209199 964.53308993586 63.872 2 0.08759256899772301 0.0027879421502003832 0.01251294764953591 ['ZXDB|p.S747Cfs*17|1|0.09|ENSG00000198455|chrX:57594287-57594288|AG/-|frameshift_variant', 'ENSG00000198455|ENST00000374888|ZXDB', 'ZXDB|p.F334Lfs*22|1|0.19|ENSG00000198455|chrX:57593045-57593045|C/-|frameshift_variant', 'ENSG00000198205|ENST00000358697|ZXDA'] 61296 11681 LIQDRVAEV True PC9_epitope_Rep3 1041.5818588893299 1041.5807699358602 49.951 2 0.08759177612046891 0.0027879421502003832 0.012513167830952451 ['ENSG00000196878|ENST00000356082|LAMB3'] 111519 11239 TIAEGFVKA True PC9_epitope_Rep4 934.5123823471798 934.51128993586 51.005 2 0.0875860540237859 0.0027879421502003832 0.012514756961332207 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 9285 9184 AVQEFGLARFK True NCI_RA007_Epitope_Rep3 1264.6928063206399 1264.69117490379 43.215 3 0.08758352993718323 0.0027879421502003832 0.01251545800666296 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 7967 13083 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.47037496793 55.447 1 0.08756111791854782 0.0027879421502003832 0.012521684395760511 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 115236 5053 TREATQAEI True PC9_epitope_Rep5 1017.5090878718897 1017.50798993586 24.464 2 0.08756101078396651 0.0027879421502003832 0.012521714166346787 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 117755 10921 TVVKAISGV True PC9_epitope_Rep5 872.53311779176 872.53202993586 46.997 2 0.08756049435347431 0.0027879421502003832 0.012521857673128129 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B', 'EIF2S3|p.H65Y|1|0.17|ENSG00000130741|chrX:24057480-24057480|C/T|missense_variant'] 9872 12961 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 54.863 2 0.08754958142602935 0.0027879421502003832 0.012524890543182357 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 48542 19418 KALQFLEEV True PC9_epitope_Rep2 1075.5913609438699 1075.59026993586 80.069 2 0.087541504933811 0.0027879421502003832 0.012527135570795933 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 108802 18683 SYTSGLETL True PC9_epitope_Rep5 969.4654917244101 969.46438993586 76.883 2 0.08754120406146838 0.0027879421502003832 0.012527219211807971 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 4027 20471 AHFPINVVI True PC9_epitope_Rep3 1008.5756513100799 1008.57454993586 84.0 2 0.08753722307726403 0.0027879421502003832 0.012528325955210152 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 2334 6559 AEPSRGPPLP True H1975_Epitope_Rep1 1019.5399940773498 1019.53888993586 30.286 2 0.08753223451784913 0.0027879421502003832 0.012529712942346184 ['ENSG00000172301|ENST00000302362|COPRS'] 97451 13333 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.4074249679301 56.546 1 0.08753061572129675 0.0027879421502003832 0.012530163053325893 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 41832 20659 IAVNAVLTV True PC9_epitope_Rep5 898.5487678559 898.54766993586 84.518 2 0.08753024381628964 0.0027879421502003832 0.012530266464725484 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 122131 11900 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.4641549679301 50.774 1 0.08752704998306333 0.0027879421502003832 0.012531154570805295 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 89641 20381 QYSPLLAAF True PC9_epitope_Rep6 1008.5280324113198 1008.52692993586 91.095 2 0.08752674246167813 0.0027879421502003832 0.012531240086111626 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 79269 8093 PAPPPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 38.58 2 0.08752219783844954 0.0027879421502003832 0.01253250391560572 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 44304 16630 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52488993586 69.198 2 0.08751943715124627 0.0027879421502003832 0.01253327170309376 ['ENSG00000138160|ENST00000260731|KIF11'] 108484 21737 SYMFVDENTF True PC9_epitope_Rep3 1251.5117902938298 1251.51127496793 88.905 1 0.08751691803451393 0.0027879421502003832 0.012533972345040287 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 100194 22812 SIVDFLITA True PC9_epitope_Rep4 977.5433481222899 977.54279496793 95.968 1 0.08751196558219415 0.0027879421502003832 0.012535349878405697 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 96886 17223 SATLVLAYL True H1975_Epitope_Rep2 949.54843350273 949.54788496793 71.538 1 0.08750449971344205 0.0027879421502003832 0.012537426793078389 ['ENSG00000188716|ENST00000338487|DUSP29', 'nc|ENSG00000133878|Q9BV47-2|DUSP26', 'ENSG00000133878|ENST00000256261|DUSP26', 'nc|ENSG00000293543|Q6B8I1|DUSP13A'] 99167 11762 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 56.403 2 0.08750092317782505 0.0027879421502003832 0.01253842185722606 ['ENSG00000132646|ENST00000379143|PCNA'] 29317 14830 FVDEHTINI True PC9_epitope_Rep4 1086.53457434374 1086.53346993586 64.983 2 0.0874960224246772 0.0027879421502003832 0.012539785466375703 ['ENSG00000123384|ENST00000243077|LRP1', 'nc|ENSG00000123384|Q07954-2|LRP1'] 58348 11541 LENEIQTY True PC9_epitope_Rep6 1008.4763907612798 1008.47528993586 55.483 2 0.08749172114973977 0.0027879421502003832 0.012540982389156184 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 39484 16446 HLDLGILYY True H1975_Epitope_Rep2 1105.58079626017 1105.5802749679299 68.479 1 0.0874911760746101 0.0027879421502003832 0.012541134075797987 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 110607 18632 TFTFSHATF True PC9_epitope_Rep1 1057.4868958753298 1057.48578993586 76.456 2 0.0874886218495243 0.0027879421502003832 0.012541844903314121 ['ENSG00000204713|ENST00000377199|TRIM27'] 8410 14105 ATLSKIIQV True PC9_epitope_Rep6 971.6015317047498 971.60042993586 66.128 2 0.08747526970058181 0.0027879421502003832 0.012545561355706988 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 14969 12073 DYFEQYGK True PC9_epitope_Rep4 1048.4501760134401 1048.44906993586 54.244 2 0.08746613486786 0.0027879421502003832 0.012548104554264293 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 43701 7754 IHDSQAPSL True PC9_epitope_Rep1 966.47705946762 966.47596993586 34.647 2 0.0874659916505004 0.0027879421502003832 0.012548144430809472 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 53151 14427 KPYNVYITV True PC9_epitope_Rep6 1095.59644632431 1095.5953499358602 67.387 2 0.08746383192237324 0.0027879421502003832 0.012548745786492505 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 126637 14287 VLNEYFHNV True PC9_epitope_Rep6 1133.5505587610498 1133.54946993586 66.848 2 0.08746114968972629 0.0027879421502003832 0.012549492666438719 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 103524 14266 SPRPPLISV True PC9_epitope_Rep2 964.57056592964 964.56946993586 60.141 2 0.08745959846115954 0.0027879421502003832 0.012549924632275075 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 78612 21067 NYSPYVNYF True PC9_epitope_Rep3 1165.50802524273 1165.50747496793 86.315 1 0.0874536478619056 0.0027879421502003832 0.01255158180747364 ['ENSG00000156162|ENST00000414645|DPY19L4'] 9364 11646 AVSDGVIKV True PC9_epitope_Rep5 886.5123823471799 886.51128993586 49.792 2 0.08745358524990067 0.0027879421502003832 0.012551599245313192 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 1423 8329 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49054993586 37.022 2 0.08745314458664885 0.0027879421502003832 0.012551721973463822 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 71666 17063 MEALPLLAA True H1975_Epitope_Rep3 927.5099398190299 927.50939496793 71.24 1 0.08745256931993921 0.0027879421502003832 0.012551882191431045 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 80092 17356 PFLQASPHF True PC9_epitope_Rep2 1042.5236157372199 1042.5225099358602 72.013 2 0.08744928872846194 0.0027879421502003832 0.012552795908339546 ['ENSG00000147689|ENST00000690554|FAM83A'] 26427 10211 FIASKGVKLV True PC9_epitope_Rep4 1060.66446631448 1060.6633699358601 46.954 2 0.08744905511223686 0.0027879421502003832 0.012552860977992733 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 2649 8348 AESLGQYAA True H1975_Epitope_Rep3 908.4239612655999 908.4234149679301 37.095 1 0.08744851858662347 0.0027879421502003832 0.012553010418884994 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 108382 18938 SYLERHGLINF True PC9_epitope_Rep5 1347.6935345966297 1347.69187490379 77.868 3 0.08744720488165282 0.0027879421502003832 0.012553376338128253 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 35921 7605 GTSELLLAK True NCI_RA007_Epitope_Rep3 930.5385970950199 930.53750993586 37.046 2 0.08743297577669347 0.0027879421502003832 0.012557340356599073 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 103621 12411 SPTGGFVDA True PC9_epitope_Rep5 849.3868474808899 849.3862949679301 52.738 1 0.0874195902933231 0.0027879421502003832 0.012561070432905793 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 73448 11393 M[Oxidation]VAPAVASV True PC9_epitope_Rep4 859.4473399429099 859.44624993586 51.594 2 0.08740989027490488 0.0027879421502003832 0.012563774149638534 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 589 9934 AARLPLDAA True PC9_epitope_Rep4 896.5079656730799 896.50686993586 45.863 2 0.08740888709991518 0.0027879421502003832 0.012564053799103908 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 65965 15335 LSDVFPGVQY True H1975_Epitope_Rep3 1123.5549754351498 1123.55447496793 64.397 1 0.08740698102572252 0.0027879421502003832 0.012564585160900803 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 31713 11138 GEGLESYVA True H1975_Epitope_Rep3 923.4236269124299 923.42307496793 47.938 1 0.08740313552150283 0.0027879421502003832 0.012565657247753999 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 96931 11439 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 51.77 2 0.0874016475234158 0.0027879421502003832 0.012566072109415325 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 99125 12924 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 55.007 2 0.0873990689155283 0.0027879421502003832 0.01256679106941203 ['ENSG00000132646|ENST00000379143|PCNA'] 104953 15972 SRDGMNIVL True PC9_epitope_Rep1 1003.5120650773499 1003.51096993586 66.243 2 0.08739519008009834 0.0027879421502003832 0.012567872628212132 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 107428 14951 SVLQQNPSL True PC9_epitope_Rep3 984.52400966004 984.52290993586 62.64 2 0.08739058963884595 0.0027879421502003832 0.012569155510546428 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 111354 19268 THQPVFIQL True PC9_epitope_Rep3 1081.59202965021 1081.59092993586 79.337 2 0.0873858322454897 0.0027879421502003832 0.012570482290636802 ['ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant'] 121475 9885 VEYEVPEAA True H1975_Epitope_Rep3 1005.4654917244097 1005.46438993586 43.054 2 0.08736681394653695 0.0027879421502003832 0.012575787587109354 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 70478 16907 LVVDWDHHL True PC9_epitope_Rep5 1132.56654317836 1132.56490490379 70.047 3 0.08736072594163637 0.0027879421502003832 0.012577486327950152 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 70767 13899 LYADVGGKQF True PC9_epitope_Rep3 1096.55530978832 1096.5542099358602 58.545 2 0.08735297418374523 0.0027879421502003832 0.01257964962051491 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 7704 3260 ASMPDNTAAQK True NCI_RA007_Epitope_Rep4 1132.5182726566002 1132.51716993586 18.201 2 0.08735085512561858 0.0027879421502003832 0.012580241049771323 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 11871 17182 DHIHIIAL True PC9_epitope_Rep3 930.52870111766 930.52760993586 71.247 2 0.08734999831881195 0.0027879421502003832 0.012580480192054764 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 1534 6821 AEEPNAAVP True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 31.155 2 0.08734885238190711 0.0027879421502003832 0.01258080003978652 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 86103 10183 QHTPTSITL True PC9_epitope_Rep4 996.52400966004 996.52290993586 46.847 2 0.08734507136062679 0.0027879421502003832 0.012581855432498207 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 126309 22154 VLIETLVTL True PC9_epitope_Rep4 999.6215984429899 999.62050993586 93.436 2 0.08733665079373462 0.0027879421502003832 0.012584206157206623 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY', 'ENST00000606061.1_1_20:32881868-32891076:-|nuORF'] 109747 4550 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 22.623 2 0.08733623108820568 0.0027879421502003832 0.012584323335001875 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 100921 23550 SLFEEMLQV True PC9_epitope_Rep1 1094.53179746242 1094.5307099358602 95.376 2 0.08733412625740287 0.0027879421502003832 0.012584910999290051 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 12029 16185 DHSIIETL True PC9_epitope_Rep4 926.47091145802 926.46980993586 70.199 2 0.08733111752879635 0.0027879421502003832 0.012585751074892045 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 104217 10123 SQHGVIIQL True NCI_RA007_Epitope_Rep3 993.5607295219299 993.55962993586 46.907 2 0.08731722146187904 0.0027879421502003832 0.012589631721602509 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 114995 8946 TRADTTTIL True PC9_epitope_Rep2 990.53457434374 990.53346993586 39.768 2 0.08730047930433511 0.0027879421502003832 0.012594308673658986 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 1724 5507 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 26.195 1 0.08729707652762059 0.0027879421502003832 0.012595259445960743 ['ENSG00000161847|ENST00000617231|RAVER1'] 33383 18281 GLAAGGIVAV True PC9_epitope_Rep4 826.4912529797799 826.49014993586 78.388 2 0.08727389751130463 0.002844537327295948 0.012601737713944326 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 68949 6809 LTPEELER True NCI_RA007_Epitope_Rep2 985.5080252427299 985.50692993586 31.101 2 0.08726742298114433 0.002844537327295948 0.01260354783223804 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 118818 6687 VAAKEVVL True H1975_Epitope_Rep3 827.5116540711899 827.51054993586 30.676 2 0.08726472411057477 0.002844537327295948 0.012604302442061682 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 97263 8275 SEAEKVYIV True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 36.78 2 0.08726338061617347 0.002844537327295948 0.012604678101783576 ['ENSG00000075914|ENST00000265564|EXOSC7'] 4102 12866 AHSDAQALVL True PC9_epitope_Rep3 1023.53490869691 1023.53380993586 54.508 2 0.08725782885443861 0.002844537327295948 0.012606230563621921 ['ENSG00000196305|ENST00000443024|IARS1'] 132190 11078 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.49037496793 49.245 1 0.08725091549523895 0.002844537327295948 0.0126081640267573 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 102387 8452 SLTGHISTV True PC9_epitope_Rep4 913.4868958753301 913.48578993586 39.975 2 0.08723208280789155 0.002844537327295948 0.012613432394678832 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 137581 4877 YEEPPQKPP True H1975_Epitope_Rep3 1083.5236753068698 1083.52256993586 23.885 2 0.08722868549742871 0.002844537327295948 0.012614382999635364 ['ENSG00000064999|ENST00000360359|ANKS1A'] 4791 17242 ALDVVNLVY True H1975_Epitope_Rep2 1004.55424715916 1004.5536749679301 71.613 1 0.08722680613558899 0.002844537327295948 0.01261490889485754 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 74745 8271 NHAPSVQI True PC9_epitope_Rep1 864.44536541652 864.44426993586 36.647 2 0.08721856114566534 0.002844537327295948 0.012617216305900262 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 42851 6805 IEQPNVASA True H1975_Epitope_Rep2 927.4661604307499 927.46506993586 31.093 2 0.08719068210778472 0.002844537327295948 0.012625021375987474 ['ENSG00000197070|ENST00000371421|ARRDC1'] 92845 21071 RPDSFVLIL True PC9_epitope_Rep2 1058.61243074162 1058.61132993586 86.506 2 0.08718170808921093 0.002844537327295948 0.012627534728895554 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 98989 10499 SHDFYSHEL True PC9_epitope_Rep5 1133.4777877436102 1133.47615490379 45.371 3 0.08718156620483837 0.002844537327295948 0.012627574470235093 ['ENSG00000095015|ENST00000399503|MAP3K1'] 104188 20940 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49618496793 85.603 1 0.08717931901549657 0.002844537327295948 0.012628203916211136 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 40480 14039 HRDGTVWQL True PC9_epitope_Rep5 1110.55704112382 1110.55594993586 59.016 2 0.08717611752973885 0.002844537327295948 0.012629100715244408 ['nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'PLEKHA7|p.F829Sfs*28|1|0.08|ENSG00000166689|chr11:16794937-16794944|TTCTGAAG/-|frameshift_variant'] 134803 23319 VYTVVDEMFL True PC9_epitope_Rep1 1214.5893123385397 1214.58877496793 94.487 1 0.08717014992944691 0.002844537327295948 0.012630772517679878 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 141645 4990 YTSGPGSRISS True PC9_epitope_Rep5 1110.53055159246 1110.5294499358602 24.226 2 0.08716584673464212 0.002844537327295948 0.012631978172286153 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 87812 5876 QREAEQSNVAL True PC9_epitope_Rep4 1243.61567819875 1243.61458993586 29.496 2 0.08716441207662641 0.002844537327295948 0.012632380154064711 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 79235 6326 PAPPPPPPP True H1975_Epitope_Rep1 865.46978925921 865.46868993586 29.397 2 0.08715724628556258 0.002867985746979924 0.012634388142484685 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 118140 21762 TYIPGTQITF True PC9_epitope_Rep3 1139.58627556343 1139.5851699358602 89.006 2 0.08715187043971774 0.002867985746979924 0.012635894752545817 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 141925 12858 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.5851099358601 54.527 2 0.08715151618245573 0.002867985746979924 0.0126359940410248 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 95829 13188 RYIPTAAAF True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 62.372 2 0.0871503894044786 0.002867985746979924 0.01263630985051492 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 134331 6348 VYPARTQTL True NCI_RA007_Epitope_Rep1 1047.57129420563 1047.57018993586 28.718 2 0.08714408431898031 0.002867985746979924 0.012638077155812557 ['ENSG00000198502|ENST00000374975|HLA-DRB5'] 31459 5409 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 25.839 2 0.08714015016344998 0.002867985746979924 0.012639180011415112 ['ENSG00000131116|ENST00000300811|ZNF428'] 73104 12245 MRIAAGESL True PC9_epitope_Rep1 946.49060135678 946.48950993586 51.959 2 0.0871318788451217 0.002867985746979924 0.01264149899315229 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1'] 109643 3733 TEAPLNPK True NCI_RA007_Epitope_Rep4 868.4654321547599 868.46432993586 20.505 2 0.08713186631006488 0.002867985746979924 0.012641502507838383 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 7844 6310 ASWGGTIEK True NCI_RA007_Epitope_Rep5 947.47124581119 947.47014993586 30.95 2 0.08712157090049989 0.002867985746979924 0.0126443895339022 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 21270 7848 ERDSQTQAIL True PC9_epitope_Rep4 1159.5833154413099 1159.5822099358602 37.602 2 0.08710645688439872 0.002867985746979924 0.012648628914601737 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 138670 16762 YIITGGGFL True H1975_Epitope_Rep1 939.5065686907499 939.5060249679301 69.875 1 0.08710485745709237 0.002867985746979924 0.012649077621748097 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 75091 16576 NHVSSPFEL True PC9_epitope_Rep1 1028.4927095317598 1028.4916099358602 68.583 2 0.08710146949451607 0.002867985746979924 0.012650028138436928 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 139419 22016 YLPELLQTV True PC9_epitope_Rep2 1074.5961119711399 1074.59557496793 90.156 1 0.08710130960239928 0.002867985746979924 0.012650072998958097 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 96426 18288 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41211496793 75.55 1 0.08709674092546656 0.002867985746979924 0.012651354884346037 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 27885 20991 FQDQQILTL True PC9_epitope_Rep2 1104.58152453616 1104.58097496793 86.193 1 0.08709638765936865 0.002867985746979924 0.012651454009317126 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 47944 19396 IYILDPELL True NCI_RA007_Epitope_Rep3 1087.61651306255 1087.61540993586 84.649 2 0.08709345242227602 0.002867985746979924 0.012652277652752857 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 40946 2628 HSVIQLAR True NCI_RA007_Epitope_Rep3 922.5348491272599 922.53374993586 14.798 2 0.08709218264775129 0.002867985746979924 0.0126526339740417 ['ENSG00000141570|ENST00000269385|CBX8'] 61178 20831 LILDPIFKV True PC9_epitope_Rep4 1056.65831830488 1056.6572299358602 88.277 2 0.08708599961433576 0.002867985746979924 0.01265436917835273 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 127694 8832 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 43.9 2 0.0870775969744635 0.002867985746979924 0.012656727652103805 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 60892 13587 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 57.32 2 0.08707335048538323 0.002867985746979924 0.012657919724907117 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 107918 21618 SVVSQFITV True PC9_epitope_Rep5 978.5385970950199 978.53750993586 88.194 2 0.08707145816600302 0.002867985746979924 0.012658450970202479 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'DAAM1|p.S926C|1|0.5|ENSG00000100592|chr14:59363703-59363703|C/G|missense_variant'] 1088 9962 AEAIRILAA True H1975_Epitope_Rep2 926.5549158654999 926.55436496793 43.31 1 0.08706518704984734 0.002867985746979924 0.012660211658977134 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 111125 18027 THEPNFTII True PC9_epitope_Rep5 1070.53965972418 1070.53856993586 74.357 2 0.08705887183234277 0.002867985746979924 0.012661984963199573 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 4300 22532 AIIEYMPLL True PC9_epitope_Rep4 1061.5831047592899 1061.58200993586 94.906 2 0.08705359416933241 0.002867985746979924 0.012663467103314915 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 54872 21773 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61157496793 88.78 1 0.08705059264968448 0.002867985746979924 0.012664310101056352 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 7668 7681 ASITALEAK True PC9_epitope_Rep4 902.50729696674 902.50618993586 36.925 2 0.08704559056912059 0.002867985746979924 0.012665715087925019 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 127017 10180 VLSDYDASY True H1975_Epitope_Rep3 1031.44475627983 1031.44417496793 44.202 1 0.08704038765718165 0.002867985746979924 0.012667176640430678 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1'] 73152 11661 MRSDTPAML True PC9_epitope_Rep5 1020.47323704048 1020.47212993586 49.85 2 0.0870372900919303 0.002867985746979924 0.012668046854539906 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 104960 14486 SRDGMNIVL True PC9_epitope_Rep4 1003.5120650773499 1003.51096993586 63.631 2 0.0870342965198766 0.002867985746979924 0.01266888790692231 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 311 9385 AAHLLNDAL True NCI_RA007_Epitope_Rep5 936.50288029264 936.50178993586 42.739 2 0.08703228841901876 0.002867985746979924 0.012669452117955048 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 25552 20145 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54788496793 84.278 1 0.08702595164167047 0.002867985746979924 0.012671232701730997 ['ENSG00000125356|ENST00000371437|NDUFA1'] 76673 16688 NQSEKIFSL True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 69.018 2 0.08701668233316776 0.002867985746979924 0.012673837728554169 ['ENSG00000130818|ENST00000253115|ZNF426'] 6124 14914 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 62.502 2 0.08701447904440225 0.002867985746979924 0.01267445701047483 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 14156 13392 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.45847496793 56.623 1 0.08700613732008936 0.002867985746979924 0.012676801890996634 ['ENSG00000149823|ENST00000279281|VPS51'] 97814 6741 SELITKAVA True H1975_Epitope_Rep2 930.5385970950199 930.53750993586 30.844 2 0.08700383480647397 0.002867985746979924 0.012677449205664017 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000184357|ENST00000331442|H1-5'] 130143 8375 VSDSKQFTYY True H1975_Epitope_Rep3 1236.56626839484 1236.56516993586 37.198 2 0.08699639748590984 0.002867985746979924 0.012679540301743123 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 32823 7083 GHLEKAVVL True PC9_epitope_Rep6 964.5705659296399 964.56946993586 36.28 2 0.08698206133567046 0.002867985746979924 0.012683572008544678 ['ENSG00000134107|ENST00000256495|BHLHE40', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'BHLHE40|p.T287Hfs*11|1|0.42|ENSG00000134107|chr3:4983305-4983306|-/C|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41'] 137578 12374 YEEPLSPISA True H1975_Epitope_Rep3 1104.5339056373998 1104.53280993586 52.784 2 0.08697211097736159 0.002867985746979924 0.012686371024921742 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000467894.5_1_1:33790468-33797238:-|nuORF', 'nc|ENSG00000134686|Q8IXK0-2|PHC2', 'nc|ENSG00000134686|Q8IXK0-3|PHC2', 'ENST00000485928.5_1_1:33791428-33799821:-|nuORF'] 73454 15750 MVAPAVASV True PC9_epitope_Rep1 843.4524249429099 843.45132993586 65.406 2 0.08697104249989425 0.002867985746979924 0.012686671620189743 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 9770 9164 AYINKVEEL True NCI_RA007_Epitope_Rep3 1077.57062549929 1077.5695299358601 43.133 2 0.08696838078904039 0.002867985746979924 0.01268742046977113 ['ENSG00000155368|ENST00000355857|DBI', 'nc|ENSG00000155368|P07108-3|DBI', 'nc|ENSG00000155368|P07108-2|DBI', 'nc|ENSG00000155368|P07108-4|DBI', 'nc|ENSG00000155368|P07108-5|DBI'] 99387 18449 SHTSVPLLL True PC9_epitope_Rep5 965.55458151233 965.55348993586 75.985 2 0.08696643572306113 0.002867985746979924 0.012687967723814938 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant', 'ENST00000495983.1_1_9:130672770-130677033:-|nuORF', 'nc|ENSG00000184005|Q8NDV1-2|ST6GALNAC3', 'ENSG00000136840|ENST00000335791|ST6GALNAC4', 'ENSG00000184005|ENST00000328299|ST6GALNAC3'] 36702 16241 GVISKTFQL True PC9_epitope_Rep4 991.57023157647 991.56912993586 70.414 2 0.0869661983257018 0.002867985746979924 0.012688034518274296 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 52514 19224 KLAPPLVTL True PC9_epitope_Rep5 950.6164534929001 950.61534993586 78.985 2 0.08696087930524656 0.002867985746979924 0.012689531172427231 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 57482 6145 LEDEVTRNL True H1975_Epitope_Rep2 1087.55095268387 1087.54984993586 28.609 2 0.0869411514776803 0.002867985746979924 0.012695083599080344 ['ENSG00000172840|ENST00000311765|PDP2', 'PDP2|p.L450Sfs*25|1|0.44|ENSG00000172840|chr16:66885628-66885628|G/-|frameshift_variant'] 134303 14809 VYNPVRAEW True PC9_epitope_Rep4 1132.5665431783598 1132.5654499358602 64.901 2 0.08692220069666796 0.002867985746979924 0.012700419482871223 ['ENSG00000165572|ENST00000379485|KBTBD6'] 15309 11927 EAFNMIDQNR True PC9_epitope_Rep4 1236.5557207944798 1236.55462993586 53.662 2 0.08690199620368982 0.002867985746979924 0.012706110698573577 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 44043 19162 IIIQTVPTL True PC9_epitope_Rep6 996.62193279616 996.62082993586 86.357 2 0.086884559939932 0.002867985746979924 0.012711024091227003 ['ENSG00000118217|ENST00000367942|ATF6', 'ATF6|p.N437Tfs*15|1|0.29|ENSG00000118217|chr1:161846567-161846567|A/-|frameshift_variant'] 36618 21697 GVIAGLNVL True PC9_epitope_Rep5 854.52255310806 854.52144993586 88.505 2 0.08688275848050327 0.002867985746979924 0.01271153182949239 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 70002 7216 LVLVGDGGTGK True NCI_RA007_Epitope_Rep5 1014.57095985246 1014.56986993586 34.435 2 0.08688259271365836 0.002867985746979924 0.012711578551555868 ['ENSG00000132341|ENST00000543796|RAN'] 31737 5627 GEGSPPAVAA True H1975_Epitope_Rep2 854.4133965818999 854.41284496793 26.643 1 0.08687930514017199 0.002867985746979924 0.012712505201056691 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant'] 104893 7677 SRDASAVSL True PC9_epitope_Rep3 904.4614094034799 904.46030993586 34.527 2 0.08686702623828306 0.002867985746979924 0.0127159667482046 ['ENSG00000198793|ENST00000361445|MTOR'] 68148 21960 LTDQTLIYL True PC9_epitope_Rep1 1078.5910265906998 1078.58992993586 89.287 2 0.08686504474559659 0.002867985746979924 0.012716525434420324 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 31833 10882 GEISALTAEA True H1975_Epitope_Rep1 960.47639076128 960.47584496793 46.817 1 0.08686496051167743 0.002867985746979924 0.012716549184871877 ['ENSG00000125968|ENST00000376112|ID1'] 88593 19627 QTDPTLLSV True PC9_epitope_Rep5 972.5127762699999 972.51222496793 80.548 1 0.08686457372781094 0.002867985746979924 0.01271665824232552 ['ENSG00000144867|ENST00000678299|SRPRB'] 31782 14553 GEIDYEAIV True H1975_Epitope_Rep2 1007.48114178855 1007.48004993586 61.134 2 0.08684501180222744 0.002867985746979924 0.012722175067226395 ['ENSG00000100519|ENST00000445930|PSMC6'] 27971 19000 FQGVEFHYV True PC9_epitope_Rep5 1124.5290950404801 1124.5279899358602 78.111 2 0.08684170453188621 0.002867985746979924 0.012723108001704774 ['ENSG00000143815|ENST00000272163|LBR'] 104114 4343 SQEGRPVQV True PC9_epitope_Rep2 998.5145076054997 998.51340993586 22.053 2 0.08684002443168028 0.002867985746979924 0.012723581959074115 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 138515 10337 YHSSGGLEL True PC9_epitope_Rep2 961.4505103666099 961.44940993586 45.088 2 0.08683312317901297 0.002867985746979924 0.012725528981670457 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 78461 20613 NYMPGQLTI True PC9_epitope_Rep1 1035.5059170677498 1035.50537496793 84.104 1 0.08683257588975717 0.002867985746979924 0.012725683398207788 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 130118 13547 VSDPVGVLY True H1975_Epitope_Rep1 947.49639792987 947.4958449679301 57.232 1 0.08682104821893778 0.002867985746979924 0.01272893631748555 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 113736 12245 TMAKESSIIGV True PC9_epitope_Rep4 1134.59546034814 1134.5943699358602 54.917 2 0.08681889921007503 0.002867985746979924 0.012729542819195456 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 6499 6549 APSVGIKAA True PC9_epitope_Rep5 812.4756029156399 812.4745099358599 30.164 2 0.0868182443851496 0.002867985746979924 0.012729727631872065 ['ENSG00000106588|ENST00000223321|PSMA2'] 11872 14814 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52760993586 64.92 2 0.08680117227140569 0.002867985746979924 0.012734546825172643 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 62739 17029 LLLPGELAK True PC9_epitope_Rep1 952.5957180483199 952.59462993586 70.326 2 0.0868002880903428 0.002867985746979924 0.012734796462653694 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 104806 21090 SQYPEIIFL True PC9_epitope_Rep6 1108.580461907 1108.57987496793 93.949 1 0.08680002694336512 0.002867985746979924 0.012734870195124436 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 138333 10813 YHEDIHTYL True PC9_epitope_Rep6 1189.54038800017 1189.53874490379 52.441 3 0.08680001330799277 0.002867985746979924 0.012734874044958702 ['ENSG00000145386|ENST00000274026|CCNA2'] 118602 13650 TYRNVMEQF True PC9_epitope_Rep6 1186.54409348162 1186.54298993586 64.281 2 0.08679915677949673 0.002867985746979924 0.012735115880873598 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 28906 10132 FTDGQQLY True H1975_Epitope_Rep2 970.43961132974 970.4390649679301 43.971 1 0.08677609279169068 0.00288425485275879 0.012741629494565932 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 108221 19042 SYIALPLTL True NCI_RA007_Epitope_Rep4 989.57973363101 989.57918496793 82.369 1 0.0867732417652587 0.00288425485275879 0.012742434885067632 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 115831 9111 TSDTLNNVGY True H1975_Epitope_Rep1 1082.48801807414 1082.48747496793 39.95 1 0.08677134433442571 0.00288425485275879 0.01274297091960527 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 21209 8905 ERDPATYNI True PC9_epitope_Rep4 1077.5090878718902 1077.50798993586 41.79 2 0.08676986802317851 0.00288425485275879 0.012743388000278333 ['ENSG00000138246|ENST00000260818|DNAJC13'] 4516 14094 AKFSLPVSL True NCI_RA007_Epitope_Rep4 960.5644179200399 960.56332993586 61.494 2 0.08676595492046561 0.00288425485275879 0.012744493574374613 ['ENSG00000103148|ENST00000611875|NPRL3'] 54207 18867 KVVNIVPVI True PC9_epitope_Rep2 979.6430025939098 979.64190993586 77.937 2 0.0867649102532547 0.00288425485275879 0.012744788740884522 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 108271 20425 SYIEHIFEI True PC9_epitope_Rep4 1149.57062549929 1149.57007496793 86.712 1 0.08676182033307021 0.00288425485275879 0.01274566182311644 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 21261 19583 ERDRLILFL True PC9_epitope_Rep4 1173.6869926642098 1173.6858899358601 83.448 2 0.08675408288697554 0.00288425485275879 0.012747848349307917 ['ENSG00000138246|ENST00000260818|DNAJC13'] 95839 10808 RYISQPPLL True NCI_RA007_Epitope_Rep5 1085.6233297784897 1085.62222993586 48.207 2 0.08675289987457015 0.00288425485275879 0.012748182688159389 ['nc|ENSG00000116406|Q9BZQ6-2|EDEM3', 'ENSG00000116406|ENST00000318130|EDEM3'] 59419 11431 LFLVSRSSP True H1975_Epitope_Rep2 1004.5654805492001 1004.56438993586 49.022 2 0.08674931699764421 0.00288425485275879 0.012749195318825861 ['ENST00000301764.11_1_11:61100418-61100496:-|nuORF'] 140431 20858 YRGIFPVL True PC9_epitope_Rep3 963.5541875895099 963.55308993586 85.503 2 0.08674338639607786 0.00288425485275879 0.01275087165503292 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 31169 11559 GAYGKVFLV True H1975_Epitope_Rep1 952.5382031721999 952.53710993586 49.449 2 0.08674276032530608 0.00288425485275879 0.012751048631521492 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'RPS6KA5|p.S448Vfs*9|1|0.24|ENSG00000100784|chr14:90900145-90900145|T/-|frameshift_variant', 'ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 77184 7563 NRSDPVTL True PC9_epitope_Rep2 900.46649478392 900.46538993586 34.46 2 0.08673982396098621 0.00288425485275879 0.012751878708284809 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 1679 6675 AEGDISNVA True H1975_Epitope_Rep3 874.40322582102 874.40267496793 30.629 1 0.08673284779357335 0.00288425485275879 0.01275385099575444 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 111063 15757 THDITTISI True PC9_epitope_Rep3 999.52367530687 999.52256993586 65.765 2 0.08672803992841924 0.00288425485275879 0.012755210432793167 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 24292 15736 EYTPRSWNF True PC9_epitope_Rep6 1198.54072235334 1198.5396299358601 72.754 2 0.08671371228058256 0.00288425485275879 0.01275926242490938 ['ENSG00000156671|ENST00000542569|SAMD8'] 17719 13364 EHNSTIIVM True PC9_epitope_Rep5 1042.51173072418 1042.5106299358602 56.42 2 0.08671274989010881 0.00288425485275879 0.012759534641393485 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 26424 11303 FIAPTGHSL True PC9_epitope_Rep4 941.4970666362101 941.49596993586 51.253 2 0.08670603134735273 0.00288425485275879 0.012761435164086635 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'SEPT6|p.K163N|1|0.23|ENSG00000125354|chrX:119652893-119652893|C/A|missense_variant', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 108887 8836 TAAPLSRIP True H1975_Epitope_Rep2 924.53926580136 924.53816993586 38.954 2 0.08670172705411985 0.00288425485275879 0.01276265289088658 ['ENST00000575214.1_1_16:3073840-3074149:-|nuORF'] 134659 16609 VYSQIPAAVKL True PC9_epitope_Rep4 1187.6914093383098 1187.6903099358601 71.862 2 0.08669850216094595 0.00288425485275879 0.012763565316622066 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 142662 21660 YYPNPPLVL True PC9_epitope_Rep1 1074.57498260374 1074.57447496793 88.144 1 0.08669480532635768 0.00288425485275879 0.012764611345402266 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 14919 5956 DYDPVAAR True H1975_Epitope_Rep3 905.42429561877 905.42318993586 27.921 2 0.08669450029420776 0.00288425485275879 0.012764697658637856 ['ENSG00000101367|ENST00000375571|MAPRE1'] 70206 12586 LVQGELVTA True PC9_epitope_Rep6 928.5229470308799 928.52184993586 59.856 2 0.08669386030547047 0.00288425485275879 0.012764878754447996 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1'] 108039 19108 SYADQMFLL True NCI_RA007_Epitope_Rep5 1086.50558271458 1086.5044899358602 80.37 2 0.08668234798360717 0.00288425485275879 0.012768136777558487 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 87528 8581 QQIKELEKL True PC9_epitope_Rep4 1127.65502382959 1127.6533649037901 40.487 3 0.08668134106016792 0.00288425485275879 0.01276842177733346 ['nc|ENSG00000095787|Q9BTA9-5|WAC', 'nc|ENSG00000095787|Q9BTA9-2|WAC', 'ENSG00000095787|ENST00000354911|WAC', 'ENST00000345541.6_1_10:28905090-28908532:+|nuORF'] 41500 17494 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 72.467 2 0.08667974203937513 0.00288425485275879 0.012768874376768012 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 32206 7857 GEYDHLPEQA True H1975_Epitope_Rep3 1157.4989171110099 1157.4978299358602 35.198 2 0.0866659094472449 0.00288425485275879 0.012772790294126599 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 76019 16956 NLYIISVK True PC9_epitope_Rep3 948.56441792004 948.56332993586 70.382 2 0.08666590547846573 0.00288425485275879 0.012772791417824805 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000577760.1_1_17:37008851-37009031:-|nuORF', 'ENST00000584912.5_1_17:37008851-37009963:-|nuORF'] 40389 4241 HQVEQTEL True NCI_RA007_Epitope_Rep3 982.4719740871799 982.47086993586 23.358 2 0.08665408338878051 0.00288425485275879 0.012776139072744459 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 117634 17345 TVTITGIVKV True PC9_epitope_Rep4 1029.6433965167298 1029.6422899358602 74.721 2 0.08664416862762792 0.00288425485275879 0.012778947268354879 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 140300 9241 YRDEADVL True PC9_epitope_Rep4 979.4610750503098 979.45996993586 43.143 2 0.08662717908410279 0.00288425485275879 0.012783760634834006 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 2635 10553 AESEITIAP True H1975_Epitope_Rep3 929.4705771048499 929.47002496793 45.659 1 0.08662238543792444 0.00288425485275879 0.012785119048564407 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 445 19799 AALPQVVAV True PC9_epitope_Rep1 866.5225531080599 866.52144993586 80.978 2 0.08661751109042967 0.00288425485275879 0.012786500470840604 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF'] 115453 6567 TRM[Oxidation]STVSEL True PC9_epitope_Rep1 1038.5015603437398 1038.50046993586 30.065 2 0.08661268396470889 0.00288425485275879 0.012787868648863495 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 69019 2874 LTQDQDVDVK True NCI_RA007_Epitope_Rep1 1159.57208205127 1159.57098993586 15.003 2 0.08660977665916675 0.00288425485275879 0.012788692748609064 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 1571 6761 AEETPPTSV True H1975_Epitope_Rep3 929.43419159613 929.43364496793 30.961 1 0.08658614536555041 0.00288425485275879 0.012795393091853527 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 87483 11762 QQDSGRLYL True PC9_epitope_Rep5 1078.5407223533398 1078.5396299358601 50.24 2 0.08658169824454397 0.00288425485275879 0.012796654384691646 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2', 'ENST00000521436.5_1_8:22475932-22477192:+|nuORF', 'ENST00000520536.1_1_8:22475798-22477192:+|nuORF'] 38929 13422 HHGTSILTL True PC9_epitope_Rep3 977.52942939365 977.52832993586 56.667 2 0.0865774117600295 0.00288425485275879 0.01279787022875336 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-5|PARPBP'] 97484 11772 SEEILTVAA True H1975_Epitope_Rep2 931.4862271689899 931.4856749679301 50.355 1 0.08657297741741556 0.00288425485275879 0.012799128126797189 ['ENSG00000204560|ENST00000376442|DHX16'] 75812 18942 NLNPEFISV True PC9_epitope_Rep6 1031.5287606873098 1031.52817496793 85.506 1 0.08654733509805514 0.00288425485275879 0.012806404416783929 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 98245 14838 SEVEIAWPA True H1975_Epitope_Rep3 1000.4865615221598 1000.48546993586 62.457 2 0.08654393348025158 0.00288425485275879 0.012807369956199882 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 109847 14267 TEELPREYL True H1975_Epitope_Rep2 1148.57135377528 1148.5702499358601 60.027 2 0.0865428407829623 0.00288425485275879 0.012807680129743858 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 6290 4893 APRGPGTVPA True PC9_epitope_Rep5 921.5032146458099 921.50210993586 23.861 2 0.08653281579255336 0.00288425485275879 0.012810526158631166 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 117081 11670 TVISEDSVVKA True PC9_epitope_Rep5 1146.61321858726 1146.6121299358601 49.884 2 0.0865278455169383 0.00288425485275879 0.012811937408308419 ['CENPI|p.E326Rfs*2|1|0.19|ENSG00000102384|chrX:101127560-101127560|A/-|frameshift_variant', 'nc|ENSG00000102384|Q92674-2|CENPI', 'ENSG00000102384|ENST00000682095|CENPI'] 28201 19933 FREELMEAL True PC9_epitope_Rep1 1136.5535955361597 1136.5524899358602 81.493 2 0.08652707853294918 0.00288425485275879 0.01281215519719552 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 88306 6205 QSEVESTEY True H1975_Epitope_Rep3 1070.44039917538 1070.4398749679299 28.88 1 0.08652446112651221 0.00288425485275879 0.012812898448947008 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 28746 15580 FSSPHLVQV True PC9_epitope_Rep3 1012.5341804209198 1012.53308993586 65.077 2 0.08651051408422934 0.00288425485275879 0.012816859605969127 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 90361 13052 REGDLLFTVA True NCI_RA007_Epitope_Rep3 1119.5924235730301 1119.5913299358601 58.617 2 0.08651005160479344 0.00288425485275879 0.01281699097643829 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 96983 7290 SAYQHPASF True PC9_epitope_Rep4 1006.4508447197799 1006.44974993586 35.355 2 0.0865015448588263 0.00288425485275879 0.012819407602679146 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 137666 16258 YEIPESLLA True H1975_Epitope_Rep2 1033.5331773614098 1033.53208993586 67.747 2 0.08650008163042863 0.00288425485275879 0.012819823325037625 ['ENSG00000102362|ENST00000372989|SYTL4'] 135070 16202 WEALVSPVV True H1975_Epitope_Rep3 998.54368247546 998.5431349679301 67.777 1 0.08649560964657853 0.00288425485275879 0.012821093953029855 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 99052 15381 SHFVSDVVI True PC9_epitope_Rep4 1001.5181960036099 1001.51708993586 67.095 2 0.08649453684834144 0.00288425485275879 0.012821398785624227 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 75022 12565 NHSDYNMVL True PC9_epitope_Rep4 1091.47059418819 1091.46948993586 56.155 2 0.08648842593633814 0.00288425485275879 0.012823135314369244 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 47219 20160 IVAPGTFEV True PC9_epitope_Rep1 931.5014833103099 931.5009349679301 82.374 1 0.08648388732468262 0.00288425485275879 0.012824425188376612 ['ENSG00000143621|ENST00000361891|ILF2'] 103530 14918 SPRPPLISV True PC9_epitope_Rep5 964.57056592964 964.56946993586 62.387 2 0.08647915800712161 0.00288425485275879 0.01282576939117496 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 2335 6536 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 30.052 2 0.08647701538503216 0.00288425485275879 0.012826378427331423 ['ENSG00000172301|ENST00000302362|COPRS'] 92287 19368 RLLDVLAPL True PC9_epitope_Rep6 1008.6331661861999 1008.63206993586 87.15 2 0.08646710854772496 0.00288425485275879 0.012829194781060203 ['ENSG00000182871|ENST00000651438|COL18A1'] 26517 19591 FIFSDTHEL True PC9_epitope_Rep5 1107.52367530687 1107.52256993586 80.409 2 0.08646628705393301 0.00288425485275879 0.012829428344644064 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 40121 19243 HPYLFPVAA True PC9_epitope_Rep3 1013.5334521449298 1013.53234993586 79.238 2 0.08646432789542735 0.00288425485275879 0.012829985380350793 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 1163 7710 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.45342993586 34.64 2 0.08645743228039166 0.00288425485275879 0.012831946150307447 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 134263 16935 VYNENLVHMI True PC9_epitope_Rep6 1230.60669373818 1230.60558993586 77.684 2 0.08645405455528285 0.00288425485275879 0.01283290671041968 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 115064 7951 TRDEDHIAL True PC9_epitope_Rep3 1068.51998690876 1068.5188899358602 35.562 2 0.08645354251006136 0.00288425485275879 0.01283305233215813 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 78551 17272 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.53392490379 71.255 3 0.08645330316432151 0.00288425485275879 0.01283312040078735 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 104373 19150 SQITSLVTL True PC9_epitope_Rep6 960.54916177872 960.54806993586 86.312 2 0.08645301039125801 0.00288425485275879 0.012833203664320255 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 104831 14693 SRAGLQFPV True PC9_epitope_Rep4 973.53451477409 973.53340993586 64.45 2 0.08645188574967894 0.00288425485275879 0.0128335235127947 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 142864 22065 YYTEFPTVL True PC9_epitope_Rep5 1131.54882742555 1131.54827496793 89.901 1 0.08644011303258882 0.00288425485275879 0.012836872128970818 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 12019 13060 DHSGQVTIL True PC9_epitope_Rep3 968.49270953176 968.49160993586 55.262 2 0.08642553854303572 0.00288425485275879 0.012841018818782031 ['ENSG00000139668|ENST00000298125|WDFY2'] 75036 12046 NHSGAVVLL True PC9_epitope_Rep2 908.50796567308 908.50686993586 51.651 2 0.08642431272194843 0.00288425485275879 0.012841367643269208 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'ITGA6|p.G477Efs*22|1|0.1|ENSG00000091409|chr2:172476437-172476437|G/-|frameshift_variant', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 9440 21877 AVVEFLTSV True PC9_epitope_Rep5 963.5276980581499 963.52660993586 89.187 2 0.08642251123085756 0.00288425485275879 0.012841880298896574 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 87716 8372 QRAITGASL True PC9_epitope_Rep3 915.5137793295099 915.51268993586 37.171 2 0.08641991040915245 0.00288425485275879 0.012842620456428477 ['ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 14178 14299 DSDSDQLFY True H1975_Epitope_Rep2 1088.42983449168 1088.42872993586 60.151 2 0.08641911629255272 0.00288425485275879 0.012842846458936068 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 3983 14726 AHDVDPIEL True PC9_epitope_Rep2 1007.4923751785899 1007.49126993586 61.911 2 0.08641159631531489 0.00288425485275879 0.012844986801201377 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 84213 19721 PYLDSFYEY True PC9_epitope_Rep6 1195.5073565363898 1195.50677496793 88.515 1 0.0864087961887867 0.00288425485275879 0.012845783861495041 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 104794 19813 SQYGEIVNI True PC9_epitope_Rep5 1021.5080252427299 1021.5074749679301 81.258 1 0.08640748783680302 0.00288425485275879 0.01284615630186904 ['ENSG00000134597|ENST00000305536|RBMX2'] 85763 8690 QHDPETSVL True PC9_epitope_Rep1 1024.48253877088 1024.4814499358602 38.266 2 0.08640565861883369 0.00288425485275879 0.012846677030970645 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 108205 15608 SYGSVFKAI True PC9_epitope_Rep4 970.5123823471799 970.51128993586 67.96 2 0.08640163527468095 0.00288425485275879 0.012847822438737562 ['ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 118411 14803 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47107496793 62.074 1 0.08639950412889813 0.00288425485275879 0.01284842919465255 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 65793 13133 LSDIGLEY True H1975_Epitope_Rep3 908.44911338428 908.4485649679301 55.764 1 0.08639234293640465 0.00288425485275879 0.01285046824693513 ['ENSG00000101126|ENST00000621696|ADNP'] 13830 15521 DQLIYNLLK True NCI_RA007_Epitope_Rep2 1118.63356010902 1118.6324699358602 65.079 2 0.08639163740753332 0.00288425485275879 0.012850669153204817 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 11897 16182 DHIRVIVQL True PC9_epitope_Rep2 1091.64512785223 1091.64402993586 67.497 2 0.08638887123863546 0.00288425485275879 0.0128514568755083 ['ENSG00000160445|ENST00000291900|ZER1'] 49005 11836 KEFPGFLEN True NCI_RA007_Epitope_Rep2 1079.5287606873098 1079.52766993586 50.641 2 0.08638600221601406 0.00288425485275879 0.012852273935572272 ['ENSG00000197747|ENST00000368811|S100A10'] 40863 15209 HSEQVFAL True PC9_epitope_Rep5 929.4606811274899 929.45958993586 63.51 2 0.08638448910072132 0.00288425485275879 0.012852704870713055 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 108374 19118 SYLERHGLINF True PC9_epitope_Rep1 1347.6935345966297 1347.69187490379 78.327 3 0.08637715301115959 0.00288425485275879 0.012854794381688763 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 12073 19954 DHTVGFIL True PC9_epitope_Rep2 900.4705175351999 900.4699649679301 82.152 1 0.08636917617400346 0.00288425485275879 0.012857066757827149 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 137778 14493 YEQDFAVLTA True H1975_Epitope_Rep2 1155.54480467427 1155.54370993586 60.904 2 0.08635690608029785 0.00288425485275879 0.012860562901049269 ['ENST00000489142.5_1_10:114207101-114244859:+|nuORF', 'ENST00000472892.1_1_10:114207101-114208650:+|nuORF', 'ENST00000483122.1_1_10:114207101-114208174:+|nuORF', 'ENST00000494728.5_1_10:114207101-114224455:+|nuORF', 'ENST00000480057.1_1_10:114207131-114286932:+|nuORF', 'nc|ENSG00000151532|Q96AJ9-1|VTI1A', 'ENSG00000151532|ENST00000393077|VTI1A', 'ENST00000496445.5_1_10:114207101-114298148:+|nuORF'] 115465 18004 TRNDIVNML True PC9_epitope_Rep3 1074.54917886206 1074.5480899358602 74.457 2 0.08635381773197891 0.00288425485275879 0.012861443011700493 ['ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18', 'ENST00000465772.5_1_10:27793310-27827017:+|nuORF'] 101533 21708 SLLGDDALVQV True PC9_epitope_Rep2 1128.60265390356 1128.60154993586 88.976 2 0.08635351456689994 0.00288425485275879 0.012861529410072362 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 124828 6603 VHIEIGPDGR True NCI_RA007_Epitope_Rep4 1091.5723568347898 1091.5712499358601 32.025 2 0.08634078251945176 0.00288425485275879 0.012865158383264345 ['ENSG00000169813|ENST00000682386|HNRNPF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF'] 76565 22181 NQLDSLMGL True PC9_epitope_Rep1 989.48518162317 989.4846349679301 90.139 1 0.08633477225467819 0.00288425485275879 0.012866871804427204 ['ENSG00000135148|ENST00000412615|TRAFD1'] 105302 15536 SRMPGELVL True PC9_epitope_Rep4 1000.5375515491999 1000.53644993586 67.683 2 0.08633036198836891 0.00288425485275879 0.012868129230905299 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 1710 10111 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 43.888 1 0.0863124699425531 0.00288425485275879 0.012873231683110664 ['ENSG00000010292|ENST00000315579|NCAPD2'] 109904 12040 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 51.391 1 0.08630617957743617 0.00288425485275879 0.012875026022024245 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 744 6567 AAVNHISQL True H1975_Epitope_Rep3 951.51377932951 951.51268993586 30.219 2 0.08629734700367384 0.00288425485275879 0.012877545928852631 ['ENSG00000120029|ENST00000370033|ARMH3', 'ENST00000495001.1_1_10:103607287-103649300:-|nuORF', 'nc|ENSG00000120029|Q5T2E6-2|ARMH3'] 46698 9815 ITDVDNGYY True H1975_Epitope_Rep2 1058.4556553167 1058.45454993586 42.737 2 0.08628940343447875 0.00288425485275879 0.012879812602411203 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 31601 6160 GEEQPPQPP True H1975_Epitope_Rep2 977.4454249861699 977.44432993586 28.667 2 0.08628182506350437 0.00288425485275879 0.012881975418303474 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 74789 10650 NHDTALTL True PC9_epitope_Rep3 883.43994568291 883.43884993586 45.912 2 0.0862802691370828 0.00288425485275879 0.012882419511553436 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 11772 10700 DHDITSQL True PC9_epitope_Rep2 927.42977492203 927.42866993586 46.471 2 0.08627970985496318 0.00288425485275879 0.012882579145644663 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 1139 6217 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 28.926 2 0.08627795883406318 0.00288425485275879 0.012883078945949315 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 114367 20097 TPSIPVLTA True PC9_epitope_Rep2 897.51713337445 897.51658496793 82.711 1 0.08627567367419418 0.00288425485275879 0.012883731234986921 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 126120 15358 VLETNLTGTFY True H1975_Epitope_Rep2 1256.6288686514 1256.6277699358602 64.234 2 0.08627435233324941 0.00288425485275879 0.012884108420270565 ['ENST00000487318.6_1_2:216928831-216946521:-|nuORF', 'ENST00000474093.5_1_2:216929948-216946521:-|nuORF', 'ENST00000497889.5_1_2:216915539-216946464:-|nuORF', 'ENSG00000115425|ENST00000265322|PECR'] 97529 8897 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 39.192 1 0.08627228106684649 0.00288425485275879 0.012884699697553447 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 9877 10883 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 52.724 2 0.08626343628118233 0.00288425485275879 0.012887224875868304 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 67968 16330 LTDEAFEFY True H1975_Epitope_Rep3 1133.49170647225 1133.49117496793 68.287 1 0.08625351351112838 0.00288425485275879 0.012890058372988492 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 432 19998 AALPNVYEV True PC9_epitope_Rep1 974.5072969667399 974.50618993586 81.749 2 0.0862446950289782 0.00288425485275879 0.012892577027956086 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 1424 8425 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49054993586 37.391 2 0.08624265816473631 0.00288425485275879 0.012893158844608463 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 105794 14345 SSIEHLTTL True PC9_epitope_Rep1 999.52367530687 999.52256993586 60.001 2 0.08624108090894651 0.00288425485275879 0.012893609394181608 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF', 'HUWE1|p.V474Cfs*21|1|0.25|ENSG00000086758|chrX:53627479-53627480|-/A|frameshift_variant'] 108352 21254 SYLDSVHFF True PC9_epitope_Rep2 1113.51311062317 1113.51200993586 87.214 2 0.08623464911484292 0.00288425485275879 0.012895446816149823 ['ENSG00000100393|ENST00000263253|EP300'] 128743 6560 VPYGVGKAA True PC9_epitope_Rep5 860.4756029156398 860.4745099358599 30.203 2 0.08623430551897489 0.00288425485275879 0.012895544980868806 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 87402 9454 QPVSGTQVV True PC9_epitope_Rep5 913.48689587533 913.48578993586 41.321 2 0.08622870989698436 0.00288425485275879 0.012897143739108918 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 90126 4695 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 25.412 2 0.08622684521477758 0.00288425485275879 0.012897676549987821 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 134623 16834 VYSPHVLNL True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 70.001 2 0.08622180993939982 0.00288425485275879 0.012899115424011977 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 92183 8406 RLFVGSIPK True NCI_RA007_Epitope_Rep4 1015.6178504752298 1015.61674993586 39.149 2 0.0862210923705324 0.00288425485275879 0.012899320487915302 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 17495 5313 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.5352099358602 27.149 2 0.08622020287104448 0.00288425485275879 0.012899574689715249 ['ENSG00000162378|ENST00000294353|ZYG11B'] 71657 15121 M[Oxidation]EALPLLAA True H1975_Epitope_Rep3 943.5048548190299 943.50430496793 63.562 1 0.08620867118327818 0.00288425485275879 0.012902870651126051 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 39855 7198 HPADSVVSV True PC9_epitope_Rep4 909.4555957470501 909.45448993586 34.99 2 0.08620647125660949 0.00288425485275879 0.012903499519438262 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 99163 11245 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 54.251 2 0.08618846604739892 0.00288425485275879 0.01290864755215212 ['ENSG00000132646|ENST00000379143|PCNA'] 4164 13450 AHTPVIISV True PC9_epitope_Rep4 935.54401682863 935.54290993586 59.633 2 0.08618380190965948 0.00288425485275879 0.012909981433742572 ['ENSG00000182993|ENST00000330828|C12orf60'] 111403 9283 THSLETQEL True PC9_epitope_Rep3 1056.5087535187201 1056.5076499358602 40.648 2 0.08617963277345461 0.00288425485275879 0.012911173861415094 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 16361 5560 EEILAQAK True NCI_RA007_Epitope_Rep1 900.4916469026 900.49054993586 25.696 2 0.08617540169650716 0.00288425485275879 0.012912384111085981 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 48423 22891 IYVPVSLGF True PC9_epitope_Rep1 993.55351888317 993.55297496793 92.847 1 0.08617044580117003 0.00288425485275879 0.012913801822480413 ['ENSG00000172818|ENST00000335987|OVOL1'] 73890 20764 NAVVELVTV True PC9_epitope_Rep1 942.5385970950199 942.53750993586 84.696 2 0.08616661432475894 0.00288425485275879 0.012914897976805888 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 27839 18904 FQDGDTIVNV True PC9_epitope_Rep5 1106.52440358286 1106.5233099358602 77.736 2 0.08615706212333908 0.00288425485275879 0.0129176311660212 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 26284 11517 FHGDAQVAL True PC9_epitope_Rep5 956.4715801643599 956.47048993586 49.296 2 0.08615576562688095 0.00288425485275879 0.012918002176988129 ['ENSG00000143412|ENST00000368947|ANXA9'] 4483 16130 AIVKEIVNI True PC9_epitope_Rep4 997.6171817688898 997.61608993586 69.983 2 0.0861512812303839 0.00288425485275879 0.012919285528501146 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 109099 16252 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.5744349679301 70.465 1 0.08614842715122484 0.00288425485275879 0.012920102375856871 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 97596 8026 SEEVGIAEA True H1975_Epitope_Rep3 903.41854153199 903.41744993586 35.845 2 0.0861429137544988 0.00288425485275879 0.012921680466966921 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 90348 13143 REFPTVPLV True NCI_RA007_Epitope_Rep4 1056.59678067748 1056.59568993586 57.652 2 0.08613903474804792 0.00288425485275879 0.012922790857916241 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 70508 15402 LVVTNLDKL True PC9_epitope_Rep6 1013.6120963884499 1013.61098993586 71.397 2 0.08612955934485234 0.00288425485275879 0.012925503632169004 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 53215 17609 KQFDKILEL True PC9_epitope_Rep5 1132.6492101731599 1132.64755490379 72.742 3 0.08612370691781476 0.00288425485275879 0.012927179429339975 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 96938 10444 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 50.926 2 0.08611910313591095 0.00288425485275879 0.012928497830538925 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 115150 15539 TRDGNVFLV True PC9_epitope_Rep2 1019.5399940773499 1019.53888993586 65.043 2 0.08611838890995305 0.00288425485275879 0.012928702377290442 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 2129 11907 AELNAQIITA True H1975_Epitope_Rep3 1042.56587447202 1042.56537496793 50.953 1 0.08611453431567126 0.00288425485275879 0.012929806344926404 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 130658 9258 VSTEVDARL True PC9_epitope_Rep4 988.5189242795998 988.51782993586 43.208 2 0.0861144961166868 0.00288425485275879 0.012929817285677396 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 72235 21049 MHFLENISL True PC9_epitope_Rep3 1102.5481162329 1102.5470099358602 86.244 2 0.08610628383060308 0.00288425485275879 0.01293216960778034 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 2466 16821 AEQLMTLISAA True H1975_Epitope_Rep3 1146.59546034814 1146.5943699358602 70.255 2 0.08610139972429152 0.00288425485275879 0.012933568799406726 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 140202 9249 YQVAAAESHPL True PC9_epitope_Rep6 1184.5825871653199 1184.5814899358602 45.728 2 0.08609968247907612 0.00288425485275879 0.012934060787201834 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 138134 20427 YGIPAIVKL True PC9_epitope_Rep5 972.60080342876 972.59970993586 83.609 2 0.08609698890589423 0.00288425485275879 0.012934832526807587 ['ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 47276 19937 IVDGMGITGV True PC9_epitope_Rep3 960.4950180308799 960.49392993586 81.93 2 0.08609209651878913 0.00288425485275879 0.012936234362814686 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525178.5_1_11:108217294-108236232:+|nuORF'] 111392 10146 THSFGNPSI True PC9_epitope_Rep3 958.45084471978 958.44974993586 43.98 2 0.08609048103407137 0.00288425485275879 0.012936697285808485 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.Q39Afs*14|1|0.2|ENSG00000145012|chr3:188406232-188406236|ACACA/-|frameshift_variant'] 10170 18412 AYVPGFAHI True PC9_epitope_Rep1 973.5021520166499 973.50104993586 75.612 2 0.08608799950976673 0.00288425485275879 0.01293740840599072 ['ENSG00000107874|ENST00000369937|CUEDC2', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF'] 10120 18802 AYVGDLQTL True PC9_epitope_Rep4 978.5022115863 978.5016649679301 80.407 1 0.08608378217578797 0.00288425485275879 0.012938617034496424 ['ENSG00000065802|ENST00000264607|ASB1'] 99320 14177 SHSPPLLQV True PC9_epitope_Rep1 976.53418042092 976.53308993586 59.354 2 0.08608293176630077 0.00288425485275879 0.012938860762766933 ['ENSG00000165030|ENST00000297689|NFIL3'] 34822 19349 GQIEVVPEV True PC9_epitope_Rep5 968.5178616504398 968.51676993586 79.472 2 0.08607152135569922 0.00288425485275879 0.012942131417214155 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 35216 9565 GRAPGGLSL True PC9_epitope_Rep4 826.4661008611 826.4650099358599 44.41 2 0.08605595835583493 0.00288425485275879 0.012946593616598414 ['ENSG00000171223|ENST00000302754|JUNB'] 90448 10275 REIVIIDTP True NCI_RA007_Epitope_Rep3 1054.60225998074 1054.60116993586 47.49 2 0.08605394129501504 0.00288425485275879 0.012947172051296666 ['ENSG00000106560|ENST00000223293|GIMAP2'] 24882 13894 FAYDGKDYLTL True NCI_RA007_Epitope_Rep3 1304.6288686513997 1304.6277699358602 61.971 2 0.08604664106202609 0.00288425485275879 0.012949265750545504 ['ENSG00000204592|ENST00000376630|HLA-E'] 78325 19999 NYISGIQTI True PC9_epitope_Rep1 1007.52876068731 1007.52766993586 81.753 2 0.08603772791334519 0.00288425485275879 0.012951822464942947 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 26208 11204 FHDLEGNAV True PC9_epitope_Rep3 1000.4614094034799 1000.46030993586 48.102 2 0.08603656895638745 0.00288425485275879 0.012952154943794005 ['ENSG00000099219|ENST00000339450|ERMP1'] 115782 8941 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4445749679298 39.351 1 0.08603409007652174 0.00288425485275879 0.012952866106029913 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 13986 17069 DRDPNSLLI True PC9_epitope_Rep5 1041.54547338061 1041.54436993586 70.675 2 0.08602673287528811 0.00288425485275879 0.012954977019465406 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'nc|ENSG00000168477|P22105-2|TNXB', 'ENST00000507684.1_1_6:31976393-31978991:-|nuORF'] 9731 19774 AYGNVFSAF True PC9_epitope_Rep6 974.4497820906199 974.44923496793 88.718 1 0.08599171528917691 0.00288425485275879 0.012965028639435827 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 63083 18822 LLQNNLPAV True PC9_epitope_Rep2 980.5654805492 980.56438993586 77.769 2 0.08598347103750832 0.00288425485275879 0.012967396178515498 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 29550 6258 FVIATSTK True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 30.75 2 0.08597508927473677 0.002906307550644567 0.012969803624929048 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 1673 5621 AEGAPQVEA True H1975_Epitope_Rep2 870.4083112014599 870.40776496793 26.62 1 0.08597268024881981 0.002906307550644567 0.012970495633763488 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'CALD1|p.T726Lfs*13|1|0.67|ENSG00000122786|chr7:134960083-134960083|C/-|frameshift_variant', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1', 'ENST00000472096.1_1_7:134625950-134632541:+|nuORF'] 114253 6537 TPNEIKVSA True PC9_epitope_Rep4 957.51311062317 957.51200993586 32.272 2 0.08596466604374178 0.002906307550644567 0.012972798018274572 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 89496 18241 QYILFPLRF True NCI_RA007_Epitope_Rep4 1195.67536535135 1195.6742699358601 78.914 2 0.08596437280750448 0.002906307550644567 0.012972882268813716 ['ENSG00000101407|ENST00000373447|TTI1'] 103356 20684 SPNSYFMDV True PC9_epitope_Rep5 1058.43789707758 1058.43737496793 84.616 1 0.08595765169893997 0.002906307550644567 0.012974813471018972 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 14423 12721 DTDSINLY True H1975_Epitope_Rep2 939.4185415319901 939.41744993586 54.032 2 0.08595744319807129 0.002906307550644567 0.012974873384714706 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 32210 8414 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 37.318 1 0.08595617131419052 0.002906307550644567 0.012975238872117543 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 55224 9310 LADDSVRSL True PC9_epitope_Rep4 974.50327421546 974.50216993586 43.417 2 0.08594558495848673 0.002906307550644567 0.012978281334169292 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 89609 16802 QYPVYWDHLEF True NCI_RA007_Epitope_Rep5 1495.67721582615 1495.67610993586 71.38 2 0.0859429318181936 0.002906307550644567 0.012979043937852073 ['ENSG00000090487|ENST00000204566|SPG21'] 84932 15531 QEEDFVLQV True H1975_Epitope_Rep2 1105.5291546101298 1105.52804993586 64.894 2 0.08593860788564563 0.002906307550644567 0.012980286875121061 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 31418 8789 GEAEAAVIEA True H1975_Epitope_Rep3 958.4607406971398 958.4601949679301 38.813 1 0.0859303320506191 0.002906307550644567 0.012982666120423725 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 1080 8370 AEAILGQNAA True H1975_Epitope_Rep3 956.4927095317599 956.4921649679301 37.178 1 0.08592275321795975 0.002906307550644567 0.012984845342840485 ['ENSG00000132383|ENST00000254719|RPA1'] 102865 11537 SPAAPVITA True PC9_epitope_Rep4 825.45961849833 825.4590749679301 52.14 1 0.08592272300515293 0.002906307550644567 0.01298485403094011 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 70495 10546 LVVSTQTALA True H1975_Epitope_Rep1 1001.5757108797299 1001.57517496793 45.519 1 0.08590843442001174 0.002906307550644567 0.012988963520007892 ['CON__P02769'] 1725 5601 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 26.546 1 0.08588706059130938 0.002906307550644567 0.012995113058446172 ['ENSG00000161847|ENST00000617231|RAVER1'] 109300 8249 TAVTVNQSL True NCI_RA007_Epitope_Rep3 931.4974605590301 931.49636993586 39.579 2 0.08588599627277768 0.002906307550644567 0.012995419348915968 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 122140 11875 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.46360993586 50.827 2 0.08588318501165965 0.002906307550644567 0.012996228408684534 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 95821 14597 RYIPTAAAF True PC9_epitope_Rep2 1008.5392658013599 1008.53816993586 61.416 2 0.08588186873857141 0.002906307550644567 0.01299660723847463 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 100219 13245 SIWDETLYK True NCI_RA007_Epitope_Rep5 1153.5655401188499 1153.56444993586 57.627 2 0.08588078590851966 0.002906307550644567 0.012996918890024923 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000474757.1_1_X:55757854-55777647:+|nuORF'] 69895 10225 LVIITAGAR True PC9_epitope_Rep6 912.5756513100799 912.57454993586 49.983 2 0.08587605472594052 0.002906307550644567 0.012998280664037506 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 117099 23440 TVISLLTGL True PC9_epitope_Rep5 915.56408356687 915.56298993586 95.145 2 0.08587548711814708 0.002906307550644567 0.012998444047348038 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 105708 13231 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.4579299358602 55.99 2 0.0858693535178334 0.002906307550644567 0.013000209699614941 ['ENSG00000115758|ENST00000234111|ODC1'] 25451 9156 FEEGLETTA True H1975_Epitope_Rep3 995.4447562798299 995.4442049679301 40.208 1 0.08585992740902282 0.002906307550644567 0.013002923592172224 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 11942 15316 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.5480899358602 71.034 2 0.08585869766307218 0.002906307550644567 0.013003277690503388 ['ENSG00000273749|ENST00000617928|CYFIP1'] 97427 16458 SEEEAFGILP True H1975_Epitope_Rep2 1090.51825557326 1090.51767496793 68.524 1 0.08585387256104246 0.002906307550644567 0.013004667138869474 ['ENST00000520503.1_1_8:33318275-33319160:-|nuORF', 'ENST00000327671.9_1_8:33311020-33319160:-|nuORF'] 24711 19385 FAMPYFIQV True NCI_RA007_Epitope_Rep3 1114.55213898418 1114.5510499358602 84.602 2 0.08585068781128541 0.002906307550644567 0.013005584303954727 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|12|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 100165 12454 SITSELHAV True PC9_epitope_Rep4 955.4974605590301 955.49636993586 55.712 2 0.08583991914231573 0.002906307550644567 0.013008685987202648 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 129371 14578 VRDPRVLIL True PC9_epitope_Rep2 1079.68151336095 1079.68040993586 61.344 2 0.08583649705586364 0.002906307550644567 0.013009671791448407 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.E632G|1|0.23|ENSG00000204267|chr6:32829437-32829437|T/C|missense_variant'] 72891 9490 MPSSVPLRA True PC9_epitope_Rep6 956.5113368013599 956.51022993586 46.755 2 0.08582725669413488 0.002906307550644567 0.013012334024349276 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 111586 21818 TIDDGIFEV True PC9_epitope_Rep5 1007.48114178855 1007.48057496793 88.955 1 0.0858269997070449 0.002906307550644567 0.013012408072020674 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 75138 14784 NHYNNIMAL True PC9_epitope_Rep2 1088.50731405008 1088.5062099358602 62.13 2 0.08582094128312488 0.002906307550644567 0.013014153847416266 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 24152 14474 EYQDLLNVK True PC9_epitope_Rep4 1120.5764391557198 1120.57534993586 63.585 2 0.08581442974541362 0.002906307550644567 0.013016030436625914 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 135075 6350 WEDDKVTEA True H1975_Epitope_Rep3 1091.4771190372699 1091.47657496793 29.417 1 0.08581090847689637 0.002906307550644567 0.013017045352975199 ['ENSG00000144224|ENST00000272638|UBXN4'] 139056 17564 YLDAIPPTFY True H1975_Epitope_Rep2 1198.5910265907 1198.58992993586 72.868 2 0.085807688196036 0.002906307550644567 0.013017973582537335 ['nc|ENSG00000092969|P61812-2|TGFB2'] 108081 15922 SYANVQDGF True PC9_epitope_Rep5 999.4297749220299 999.42927496793 66.235 1 0.08580131862267344 0.002906307550644567 0.013019809763294983 ['ENSG00000152766|ENST00000371930|ANKRD22'] 40366 18135 HQSGIVQLL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 74.957 2 0.08579819369116765 0.002906307550644567 0.013020710688216556 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 23962 17993 EYLPKVTGL True PC9_epitope_Rep5 1018.5698972232999 1018.56880993586 74.226 2 0.08579785474097443 0.002906307550644567 0.013020808411865554 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 116264 12139 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 51.709 2 0.08579521782408264 0.002906307550644567 0.013021568692121406 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 111518 11836 TIAEGFVKA True PC9_epitope_Rep2 934.5123823471798 934.51128993586 50.856 2 0.08579342879864756 0.002906307550644567 0.01302208453071812 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 76882 11777 NRDLATPVM True PC9_epitope_Rep3 1015.51206507735 1015.51096993586 50.318 2 0.08579021419547311 0.002906307550644567 0.013023011461606684 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 88304 6102 QSEVESTEY True H1975_Epitope_Rep2 1070.44039917538 1070.4398749679299 28.448 1 0.08577818106793611 0.002906307550644567 0.013026481766050495 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 32103 5698 GETEPPAAP True H1975_Epitope_Rep3 867.3974121645898 867.39686496793 26.948 1 0.08576957819048057 0.002906307550644567 0.013028963334559255 ['ENSG00000177303|ENST00000321617|CASKIN2', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 6724 14817 AQAPGVITGV True PC9_epitope_Rep2 911.5076313199099 911.50652993586 62.257 2 0.08576177326620077 0.002906307550644567 0.013031215112440108 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 2228 11668 AEMSTPLSV True H1975_Epitope_Rep3 933.44773348529 933.44662993586 50.016 2 0.08575967501345397 0.002906307550644567 0.013031820536271459 ['ENSG00000137275|ENST00000259808|RIPK1'] 24422 18680 FADGFVLVY True H1975_Epitope_Rep1 1029.51713337445 1029.51657496793 77.9 1 0.0857539887786944 0.002906307550644567 0.013033461359358683 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 106815 13202 SVALVIHNV True PC9_epitope_Rep4 950.5549158655001 950.55380993586 58.68 2 0.0857510522925546 0.002906307550644567 0.013034308789650952 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2'] 115117 11727 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 49.982 2 0.08573851446683863 0.002906307550644567 0.013037927621040356 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 114845 19628 TQNDIISTL True PC9_epitope_Rep5 1003.51858992643 1003.51748993586 80.551 2 0.085731858144368 0.002906307550644567 0.013039849240597406 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 133919 19107 VYIHPSSALF True PC9_epitope_Rep3 1132.59169529704 1132.5905899358602 78.719 2 0.08572983231606023 0.002906307550644567 0.013040434131700961 ['ENSG00000067596|ENST00000262415|DHX8'] 62968 14326 LLPHVVPGTT True PC9_epitope_Rep5 1032.59678067748 1032.59568993586 60.106 2 0.08572854660227804 0.002906307550644567 0.013040805351967593 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 86237 19769 QILPTLVRL True PC9_epitope_Rep4 1051.67536535135 1051.6742699358601 84.166 2 0.08572375889456858 0.002906307550644567 0.01304218777994942 ['ENSG00000182481|ENST00000330459|KPNA2'] 133063 20752 VVPQQLLTV True PC9_epitope_Rep1 995.60153170475 995.60042993586 84.65 2 0.08571761342224263 0.002906307550644567 0.013043962458387728 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 105222 15095 SRIDIANTL True PC9_epitope_Rep1 1001.5505587610501 1001.54946993586 62.882 2 0.08571653884907186 0.002906307550644567 0.013044272795060069 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 128710 13387 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 56.353 2 0.08571243280826116 0.002906307550644567 0.013045458683487518 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 2619 5198 AERYDDMAA True NCI_RA007_Epitope_Rep3 1040.4233096425999 1040.42220993586 27.446 2 0.08571101598766903 0.002906307550644567 0.013045867906872132 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 12057 17294 DHTAPLLL True PC9_epitope_Rep2 878.48616759934 878.48506993586 71.78 2 0.08570648400207186 0.002906307550644567 0.01304717697137418 ['ENSG00000188352|ENST00000338382|FOCAD'] 96364 10000 RYTTEFHEL True PC9_epitope_Rep2 1194.5669371011797 1194.56530490379 43.792 3 0.08569973127849512 0.002906307550644567 0.01304912772582291 ['ENSG00000166483|ENST00000450114|WEE1', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENST00000524549.1_1_11:9597437-9598815:+|nuORF'] 104557 12028 SQPPVQVSV True PC9_epitope_Rep6 939.5025459394699 939.50144993586 57.561 2 0.08569829527719673 0.002906307550644567 0.013049542599186434 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 106845 6820 SVASISLTK True NCI_RA007_Epitope_Rep5 904.52294703088 904.52184993586 32.919 2 0.08569715839070628 0.002906307550644567 0.013049871064472604 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 47223 20093 IVAPGTFEV True PC9_epitope_Rep3 931.5014833103099 931.50038993586 82.539 2 0.08568878713389913 0.002906307550644567 0.013052289898663996 ['ENSG00000143621|ENST00000361891|ILF2'] 88266 7125 QSEEAVAAY True H1975_Epitope_Rep2 966.4294405688597 966.4288949679301 32.34 1 0.08568558820767963 0.002906307550644567 0.013053214324460827 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 28202 19904 FREELMEAL True PC9_epitope_Rep3 1136.5535955361597 1136.5524899358602 81.802 2 0.0856612731669465 0.002906307550644567 0.01306024290201465 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 119612 6992 VATVSLPR True H1975_Epitope_Rep3 841.5021520166499 841.50104993586 31.857 2 0.08565898316321198 0.002906307550644567 0.013060905040924043 ['CON__P00761'] 107399 19277 SVLNELPSA True PC9_epitope_Rep3 928.48656152216 928.48601496793 79.37 1 0.08565445791036931 0.002906307550644567 0.013062213579804515 ['nc|ENSG00000167608|Q7Z404|TMC4', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 98946 6450 SHANSAVVL True PC9_epitope_Rep2 896.47158016436 896.47048993586 30.225 2 0.08565328016797617 0.002906307550644567 0.01306255416041131 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 3286 4994 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 26.815 2 0.08565189710379856 0.002906307550644567 0.013062954126836474 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 32332 21378 GFGFVLFK True PC9_epitope_Rep1 913.5061747679299 913.50506993586 87.062 2 0.0856362424766604 0.002906307550644567 0.013067482071245543 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 114807 19975 TQLGPPYHILV True PC9_epitope_Rep1 1236.68665831104 1236.68556993586 81.659 2 0.08563463805350181 0.002906307550644567 0.013067946218122267 ['ENSG00000119616|ENST00000341162|FCF1'] 43445 10707 IGGIGTVPVGR True PC9_epitope_Rep6 1024.6029286870798 1024.60182993586 51.995 2 0.08561744646158978 0.002906307550644567 0.013072920583909305 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 17476 12553 EHFNGVAEL True PC9_epitope_Rep4 1014.4770594676198 1014.47596993586 56.106 2 0.08561505994520947 0.002906307550644567 0.013073611260430752 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B'] 115315 12359 TRHPFLTSL True PC9_epitope_Rep2 1070.58727862294 1070.5861899358601 52.848 2 0.08561462361757934 0.002906307550644567 0.013073737540778894 ['nc|ENSG00000117020|Q9Y243-2|AKT3', 'ENSG00000117020|ENST00000673466|AKT3'] 1831 8608 AEIDAHLVA True H1975_Epitope_Rep3 937.48689587533 937.48578993586 38.102 2 0.08561429963048982 0.002906307550644567 0.013073831308681632 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 44306 16642 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52547496793 69.245 1 0.08561110197999737 0.002906307550644567 0.013074756802318415 ['ENSG00000138160|ENST00000260731|KIF11'] 114877 22350 TQRGALFLLF True PC9_epitope_Rep5 1164.6655289436399 1164.6644299358602 90.978 2 0.08560730300882198 0.002906307550644567 0.013075856415970144 ['ENST00000481988.1_1_X:99901319-99905990:+|nuORF', 'ENSG00000102359|ENST00000373004|SRPX2'] 60974 13450 LIDVGTGYY True H1975_Epitope_Rep1 999.49131254943 999.4907749679301 56.851 1 0.08560625091763356 0.002906307550644567 0.01307616095956727 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 4166 14866 AHTPVIISV True PC9_epitope_Rep5 935.54401682863 935.54290993586 62.185 2 0.08560110472033883 0.002906307550644567 0.013077650699939809 ['ENSG00000182993|ENST00000330828|C12orf60'] 96419 18265 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41156993586 75.046 2 0.08559674406592412 0.002906307550644567 0.013078913163556435 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 7248 16446 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.52387496793 68.5 1 0.08559515084697673 0.002906307550644567 0.013079374448863517 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 8381 6574 ATLNSIVAK True NCI_RA007_Epitope_Rep5 915.5389314481899 915.53782993586 31.949 2 0.08558047083857558 0.002906307550644567 0.013083625478630064 ['ENSG00000007944|ENST00000356840|MYLIP'] 40571 6863 HRGTGIAL True PC9_epitope_Rep5 823.46643521427 823.46532993586 31.369 2 0.08558030452946333 0.002906307550644567 0.013083673645797236 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 21415 17013 ERIPDVAAL True PC9_epitope_Rep1 982.5447451046199 982.54364993586 70.264 2 0.08555903767043713 0.002906307550644567 0.013089834422323676 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 26952 21753 FLDSTSPLL True PC9_epitope_Rep1 991.52261267771 991.5220649679301 88.507 1 0.08555308055363434 0.002930108299100859 0.01309156062375082 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 109752 5134 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 24.852 2 0.08553676792724539 0.002930108299100859 0.013096288652071297 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 60792 15152 LHSLGSVSL True PC9_epitope_Rep3 911.50763131991 911.50652993586 63.423 2 0.08553067197691763 0.002930108299100859 0.01309805590636609 ['ENSG00000131746|ENST00000254051|TNS4'] 97816 7084 SELITKAVA True NCI_RA007_Epitope_Rep4 930.5385970950199 930.53750993586 33.872 2 0.0855302754977241 0.002930108299100859 0.013098170855954145 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000184357|ENST00000331442|H1-5'] 1014 6891 AEAEAGVAV True H1975_Epitope_Rep2 815.4024975450299 815.40194496793 31.427 1 0.08552632140683346 0.002930108299100859 0.013099317301315704 ['ENSG00000178685|ENST00000313028|PARP10', 'ENST00000528580.1_1_8:145060208-145060527:-|nuORF'] 140182 8140 YQTEKGITV True PC9_epitope_Rep2 1037.5393253710097 1037.53822993586 36.668 2 0.08552266135947671 0.002930108299100859 0.013100378576203333 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 37683 6302 GVYGSFASK True NCI_RA007_Epitope_Rep5 914.4497820906199 914.44868993586 30.919 2 0.08551715137923696 0.002930108299100859 0.01310197641417435 ['ENSG00000155096|ENST00000337198|AZIN1'] 13953 20649 DRDDFPVVL True PC9_epitope_Rep3 1074.53457434374 1074.53346993586 84.698 2 0.08550994174392575 0.002930108299100859 0.013104067411968123 ['ENSG00000126458|ENST00000246792|RRAS'] 124714 16799 VHAEEVIVL True PC9_epitope_Rep5 1007.5651461960299 1007.56404993586 69.626 2 0.08550675693850476 0.002930108299100859 0.013104991195541729 ['ENSG00000120733|ENST00000314358|KDM3B'] 15132 7065 EAAAAVVAAA True H1975_Epitope_Rep2 842.4497820906199 842.44923496793 32.104 1 0.08550604308607043 0.002930108299100859 0.013105198263749786 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000398654.7_1_18:44497289-44497409:-|nuORF'] 34688 16348 GQDGSVVQF True PC9_epitope_Rep1 935.4348603024699 935.43376993586 67.703 2 0.08550542264402038 0.002930108299100859 0.01310537823877562 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF', 'ENST00000511179.1_1_17:48313271-48313352:+|nuORF'] 75007 8735 NHSADFETV True PC9_epitope_Rep3 1018.43558857846 1018.43448993586 38.552 2 0.08550369022810038 0.002930108299100859 0.013105880782480863 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 34903 19329 GQMGSFIRL True PC9_epitope_Rep1 1007.5222358382299 1007.52112993586 79.155 2 0.0854976406081456 0.002930108299100859 0.013107635814288936 ['ENSG00000119392|ENST00000309971|GLE1'] 85771 7133 QHDPETSVL True PC9_epitope_Rep6 1024.48253877088 1024.4814499358602 36.498 2 0.08549674251651042 0.002930108299100859 0.013107896375042307 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 39757 17167 HLVPEVPTV True PC9_epitope_Rep5 989.55458151233 989.55348993586 71.053 2 0.08548245894031677 0.002930108299100859 0.013112041083907532 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 68967 6145 LTPETLTR True NCI_RA007_Epitope_Rep5 929.51819600361 929.51708993586 30.317 2 0.08545899351943147 0.002930108299100859 0.013118852796228757 ['CON__REFSEQ:XP_001252647', 'CON__Q9TTE1', 'CON__A2I7N3', 'CON__A2I7N1'] 20880 20661 EQLGTFTTL True PC9_epitope_Rep1 1008.51277627 1008.51227496793 84.294 1 0.08544997426958685 0.002930108299100859 0.013121471855952182 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 4323 22166 AIISELVSI True PC9_epitope_Rep2 943.5589981864299 943.55790993586 90.75 2 0.08543835046222867 0.002930108299100859 0.01312484796778207 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 75402 7461 NIVEAAAVR True PC9_epitope_Rep6 941.5294293936498 941.52832993586 37.937 2 0.08543405701874054 0.002930108299100859 0.0131260951968203 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF', 'ENST00000475510.1_1_3:124452395-124452491:-|nuORF'] 49829 7959 KHTEMITTL True PC9_epitope_Rep4 1072.5586809166 1072.55758993586 38.058 2 0.08542951472848175 0.002930108299100859 0.013127414836411673 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1'] 75379 18832 NITDKGIIAL True PC9_epitope_Rep3 1056.6179100448799 1056.6168099358601 77.66 2 0.08542218974022153 0.002930108299100859 0.01312954317685867 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 140275 16623 YRAPEVLL True PC9_epitope_Rep3 959.5440168286299 959.54290993586 69.076 2 0.08541674672145502 0.002930108299100859 0.013131124904791694 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 6323 9385 APRPTIINA True PC9_epitope_Rep1 951.5501648382299 951.54906993586 40.958 2 0.08541632481652404 0.002930108299100859 0.01313124751682587 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 128941 21069 VQIGDIVTV True PC9_epitope_Rep1 942.5385970950199 942.53750993586 85.874 2 0.08539981086950972 0.002930108299100859 0.013136047569839245 ['ENSG00000142534|ENST00000270625|RPS11'] 29425 17067 FVDVLGLEEE True H1975_Epitope_Rep1 1148.5601203852398 1148.5595749679298 71.074 1 0.08538915041814414 0.002930108299100859 0.013139147084698153 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 40145 17405 HQDDFNQLL True PC9_epitope_Rep5 1128.5199869087598 1128.5188899358602 71.948 2 0.08538675233677616 0.002930108299100859 0.013139844419180854 ['nc|ENSG00000171056|Q9BT81-2|SOX7', 'nc|ENSG00000258724|Q96BK5-2|PINX1', 'ENST00000517607.1_1_8:10679572-10690446:-|nuORF', 'ENSG00000254093|ENST00000314787|PINX1'] 16738 8435 EESPVQYAA True H1975_Epitope_Rep2 992.4450906329998 992.44398993586 37.396 2 0.0853826689633549 0.002930108299100859 0.013141031897410498 ['ENSG00000143653|ENST00000366510|SCCPDH'] 127351 15993 VMSATFAKF True PC9_epitope_Rep2 1000.5051887917599 1000.50408993586 66.77 2 0.08538076793811332 0.002930108299100859 0.013141584765500671 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 108486 21781 SYMFVDENTF True PC9_epitope_Rep5 1251.5117902938298 1251.51068993586 88.812 2 0.08537192994170771 0.002930108299100859 0.013144155374723583 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 130072 10452 VSDFGGRSL True PC9_epitope_Rep5 936.46649478392 936.46538993586 45.19 2 0.08536194045202086 0.002930108299100859 0.013147061476002326 ['ENSG00000132383|ENST00000254719|RPA1'] 109778 10370 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.44980993586 44.899 2 0.08535795055256698 0.002930108299100859 0.013148222370237696 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 142908 20383 YYVGGEIVTI True PC9_epitope_Rep4 1112.57537652656 1112.57426993586 86.548 2 0.08534841371687124 0.002930108299100859 0.01315099758256355 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 96010 15123 RYLPDTLLL True NCI_RA007_Epitope_Rep1 1102.63864548946 1102.63754993586 62.895 2 0.0853441736581148 0.002930108299100859 0.013152231613740979 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 62026 19803 LLDRFLATV True PC9_epitope_Rep4 1046.61243074162 1046.61132993586 84.299 2 0.0853415092759769 0.002930108299100859 0.013153007114119247 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 114794 18572 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 76.789 2 0.08533825387134081 0.002930108299100859 0.013153954697129903 ['ENSG00000119616|ENST00000341162|FCF1'] 42154 14879 IDPFSLDALSK True H1975_Epitope_Rep1 1204.6339540318397 1204.6328499358601 62.466 2 0.08533467061516706 0.002930108299100859 0.013154997785470395 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 73021 17647 MRASSFLIV True PC9_epitope_Rep6 1022.5582869937799 1022.55718993586 80.518 2 0.08533424168816932 0.002930108299100859 0.013155122651634644 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 108656 21252 SYPTFFPRF True PC9_epitope_Rep5 1160.5654805491997 1160.5643899358602 86.796 2 0.08532767145236828 0.002930108299100859 0.013157035471246359 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 65846 16886 LSDLGLLSY True H1975_Epitope_Rep3 979.52261267771 979.5220649679301 70.504 1 0.0853150967079155 0.002930108299100859 0.013160697138342108 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 43818 7978 IHSEPLGV True PC9_epitope_Rep6 850.45486747106 850.45376993586 40.147 2 0.08531272554549478 0.002930108299100859 0.013161387709791614 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 117651 14098 TVTNAVVTV True PC9_epitope_Rep3 902.50729696674 902.50618993586 59.313 2 0.08531037138549952 0.002930108299100859 0.013162073363251883 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 9223 14360 AVNPKFLAV True PC9_epitope_Rep4 957.5647522732099 957.56364993586 63.143 2 0.08530701209058002 0.002930108299100859 0.013163051822363232 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 126022 17710 VLDSVDVRL True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 73.319 2 0.08530571049955611 0.002930108299100859 0.013163430954136867 ['ENSG00000169105|ENST00000306243|CHST14'] 64667 19423 LPVEFTIDA True PC9_epitope_Rep6 1003.52261267771 1003.52207496793 87.37 1 0.08529537184678274 0.002930108299100859 0.013166442796628687 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 103265 12606 SPLLLQAKA True PC9_epitope_Rep1 939.5753169569099 939.57420993586 53.357 2 0.08529146697502012 0.002930108299100859 0.01316758052746207 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 2186 11420 AELWGEQAEA True H1975_Epitope_Rep3 1102.49310345458 1102.49200993586 49.043 2 0.08528989706022336 0.002930108299100859 0.013168037966901107 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 105067 9214 SRDQSTPII True PC9_epitope_Rep1 1015.5298233164699 1015.52872993586 40.294 2 0.08528605536223424 0.002930108299100859 0.013169157418260073 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 23311 7846 EVQLVESG True NCI_RA007_Epitope_Rep4 859.4287122928699 859.42816496793 36.88 1 0.0852849573976708 0.002930108299100859 0.013169477376044245 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000223648|A0A075B6Q5|IGHV3-64', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 139935 20708 YQAPDIDVQL True PC9_epitope_Rep2 1160.57135377528 1160.57077496793 85.089 1 0.08528150620621922 0.002930108299100859 0.013170483135192262 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 76749 19453 NQVSTIVSL True PC9_epitope_Rep2 959.52876068731 959.52766993586 80.207 2 0.08527909427127986 0.002930108299100859 0.013171186073247274 ['ENSG00000092148|ENST00000399332|HECTD1'] 65932 14725 LSDSFSDLY True H1975_Epitope_Rep2 1045.46040634397 1045.4593099358601 61.801 2 0.08527848962492612 0.002930108299100859 0.013171362297855208 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 60790 15051 LHSLGSVSL True PC9_epitope_Rep1 911.50763131991 911.50652993586 62.711 2 0.08527688041095106 0.002930108299100859 0.013171831315224796 ['ENSG00000131746|ENST00000254051|TNS4'] 71331 23815 LYQILQGIVF True PC9_epitope_Rep1 1192.6855956818797 1192.68448993586 96.401 2 0.08527162242754527 0.002930108299100859 0.013173363903194435 ['ENSG00000170312|ENST00000395284|CDK1'] 34679 9089 GQDGQLKGF True PC9_epitope_Rep1 948.4664947839199 948.46538993586 39.813 2 0.08526991776867304 0.002930108299100859 0.013173860810275112 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 86314 10061 QITQINHGL True PC9_epitope_Rep5 1022.5508931142199 1022.5497899358601 43.679 2 0.08526784363439426 0.002930108299100859 0.013174465443025708 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 103908 12453 SQAIAFQQA True PC9_epitope_Rep2 962.4821448480601 962.48104993586 53.207 2 0.0852613662213022 0.002930108299100859 0.013176353847770125 ['ENSG00000139168|ENST00000266529|ZCRB1'] 87562 9336 QQLGKVVQV True PC9_epitope_Rep2 997.5920296502098 997.59092993586 41.249 2 0.08525973767045782 0.002930108299100859 0.013176828670480856 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 98270 7619 SEVGDTQVV True H1975_Epitope_Rep2 932.4450906330001 932.44398993586 34.259 2 0.08525908968939419 0.002930108299100859 0.01317701760128576 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 2526 4270 AEQPSQPSSTP True H1975_Epitope_Rep2 1127.5094817947102 1127.5083899358601 21.537 2 0.08525450200391585 0.002930108299100859 0.013178355298379662 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 77992 20932 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 85.963 2 0.08524123312401855 0.002958494901622864 0.013182225015302938 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 138257 9886 YGYHDFGSS True PC9_epitope_Rep2 1031.3984747937498 1031.39736993586 43.36 2 0.08524014750212949 0.002958494901622864 0.013182541671844145 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 107886 13040 SVVPDVRSV True PC9_epitope_Rep1 956.52909504048 956.52798993586 55.028 2 0.08522830964064047 0.002958494901622864 0.01318599502976363 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 14140 10036 DSDHWAPIHY True H1975_Epitope_Rep2 1239.53088594563 1239.5297899358602 43.595 2 0.08521755290792758 0.002958494901622864 0.013189133737877688 ['nc|ENSG00000001631|O00522-2|KRIT1', 'ENST00000486261.5_1_7:91830052-91864980:-|nuORF', 'ENST00000475770.5_1_7:91830052-91864980:-|nuORF', 'ENSG00000001631|ENST00000394505|KRIT1'] 90283 8617 REELSNVLA True H1975_Epitope_Rep3 1029.5454733806098 1029.54436993586 38.139 2 0.08519727166636541 0.002983190866846423 0.013195053516953293 ['ENSG00000130255|ENST00000347512|RPL36'] 126043 6235 VLEDSDLK True PC9_epitope_Rep2 917.4705771048499 917.46948993586 29.38 2 0.08517070019513737 0.002983190866846423 0.013202813102096029 ['ENSG00000044574|ENST00000324460|HSPA5'] 48770 9137 KDLEALLNSK True NCI_RA007_Epitope_Rep1 1129.63428838501 1129.63264490379 39.544 3 0.08515584603113785 0.002983190866846423 0.01320715278993602 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 89435 20816 QYEEQFVTL True PC9_epitope_Rep1 1155.5448046742697 1155.54427496793 84.897 1 0.08515006615341819 0.002983190866846423 0.013208841761180014 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 37837 14527 GYLADPAKF True PC9_epitope_Rep4 980.4967322830399 980.49562993586 63.794 2 0.08514491165925794 0.002983190866846423 0.013210348157038494 ['ENSG00000137547|ENST00000260102|MRPL15'] 118672 23190 TYTDLLSVI True PC9_epitope_Rep1 1023.54882742555 1023.54772993586 93.995 2 0.08513261054629101 0.002983190866846423 0.013213943798827194 ['ENST00000526447.1_1_11:67274830-67275269:-|nuORF', 'ENSG00000167797|ENST00000301488|CDK2AP2', 'ENST00000525402.5_1_11:67274418-67275269:-|nuORF'] 43823 18622 IHSEPLGVVL True PC9_epitope_Rep3 1062.60734536118 1062.6062499358602 76.851 2 0.08512516652519947 0.002983190866846423 0.01321612014968223 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 67807 19610 LTADPDQITNI True PC9_epitope_Rep1 1199.60338217955 1199.6022899358602 80.258 2 0.08511875526531111 0.002983190866846423 0.013217994830609424 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 139804 7949 YPIEHGIVTN True H1975_Epitope_Rep3 1141.5767735088898 1141.57566993586 35.545 2 0.085118700151939 0.002983190866846423 0.013218010947089968 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 97361 7569 SEDISHITP True H1975_Epitope_Rep2 997.47163973401 997.47054993586 34.068 2 0.08511763627929911 0.002983190866846423 0.013218322052758994 ['ENSG00000138175|ENST00000260746|ARL3'] 111102 6535 THEDAVAAM True PC9_epitope_Rep1 943.40693130247 943.40582993586 29.94 2 0.0851104089056888 0.002983190866846423 0.013220435718406701 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'nc|ENSG00000096746|P31942-6|HNRNPH3', 'ENST00000478698.1_1_10:70098871-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-5|HNRNPH3', 'ENST00000490442.5_1_10:70098233-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-4|HNRNPH3', 'ENST00000469172.5_1_10:70098233-70101808:+|nuORF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF', 'nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1'] 48426 21940 IYVPVSLGF True PC9_epitope_Rep4 993.55351888317 993.55242993586 92.602 2 0.08510779806062779 0.002983190866846423 0.013221199345584946 ['ENSG00000172818|ENST00000335987|OVOL1'] 104006 16367 SQDFPGSNL True PC9_epitope_Rep1 963.42977492203 963.42866993586 67.775 2 0.08510650884416093 0.002983190866846423 0.013221576434494349 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 90051 5287 RDYVAPTA True NCI_RA007_Epitope_Rep2 891.4450310633499 891.44392993586 25.187 2 0.08510144367735642 0.002983190866846423 0.013223058066686074 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 32233 6149 GEYIIRQGA True NCI_RA007_Epitope_Rep5 1005.5243440132098 1005.52324993586 30.331 2 0.08509421926266683 0.002983190866846423 0.013225171579571319 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'ENST00000373975.2_1_10:53806680-53893656:+|nuORF'] 25716 8954 FESIIKEAA True H1975_Epitope_Rep2 1006.5335117145798 1006.53240993586 39.395 2 0.08508808124030431 0.002983190866846423 0.013226967516701523 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5'] 73898 20688 NAVVELVTV True PC9_epitope_Rep5 942.5385970950199 942.53750993586 84.632 2 0.08508744324921971 0.002983190866846423 0.013227154201053273 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 21665 15651 ERSDTFINL True PC9_epitope_Rep6 1093.54038800017 1093.53928993586 72.405 2 0.08507247166315407 0.002983190866846423 0.013231535790782893 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 6894 3897 AQIENSAAVEK True NCI_RA007_Epitope_Rep4 1158.5880664685799 1158.58696993586 21.21 2 0.08507210613497243 0.002983190866846423 0.01323164278347634 ['ENSG00000162645|ENST00000370466|GBP2'] 90214 3980 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 20.435 2 0.08504655791262439 0.002983190866846423 0.013239122947663743 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 64810 4316 LQDAEIAR True NCI_RA007_Epitope_Rep5 914.4821448480599 914.48104993586 23.197 2 0.08503964288087507 0.002983190866846423 0.013241148257230705 ['ENSG00000197956|ENST00000368719|S100A6'] 23891 13389 EYISTVKTL True PC9_epitope_Rep5 1052.57537652656 1052.57426993586 56.517 2 0.0850360409925731 0.002983190866846423 0.01324220331206517 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 103852 8523 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 37.74 2 0.08503004848440229 0.002983190866846423 0.013243958795798767 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 73670 13657 MYKLSSEQF True PC9_epitope_Rep4 1131.52704643515 1131.5259499358601 60.423 2 0.08502573350912614 0.002983190866846423 0.013245222987961653 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 23116 16394 EVISKLYAV True PC9_epitope_Rep5 1020.5855472874398 1020.5849749679301 68.057 1 0.08501915980166627 0.002983190866846423 0.013247149156967836 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 92971 14607 RPKLNEGVVEF True PC9_epitope_Rep5 1286.6982856239 1286.69665490379 61.188 3 0.08499532515216959 0.002983190866846423 0.013254135184338467 ['nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5', 'ENST00000554465.5_1_14:70237039-70238175:+|nuORF'] 142748 12629 YYQNYFEKL True NCI_RA007_Epitope_Rep5 1266.5920892198599 1266.59098993586 55.23 2 0.08498860946389812 0.002983190866846423 0.013256104204521148 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 38316 10589 HEGLPGLAV True H1975_Epitope_Rep3 891.4814165720699 891.48030993586 45.8 2 0.0849808567411199 0.002983190866846423 0.013258377622598369 ['ENSG00000169710|ENST00000306749|FASN'] 6068 7791 APLLQPRAA True PC9_epitope_Rep4 935.5552502186699 935.55414993586 37.367 2 0.08497889825442019 0.002983190866846423 0.01325895198973962 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 35677 14635 GTEFTTVLY True H1975_Epitope_Rep2 1029.5018772331298 1029.5007899358602 61.452 2 0.08497791202116625 0.002983190866846423 0.013259241232112386 ['ENSG00000073282|ENST00000264731|TP63', 'nc|ENSG00000073282|Q9H3D4-11|TP63', 'ENST00000460036.1_1_3:189507541-189590785:+|nuORF', 'nc|ENSG00000073282|Q9H3D4-6|TP63', 'nc|ENSG00000073282|Q9H3D4-9|TP63', 'nc|ENSG00000073282|Q9H3D4-8|TP63', 'nc|ENSG00000073282|Q9H3D4-2|TP63', 'nc|ENSG00000073282|Q9H3D4-12|TP63', 'nc|ENSG00000073282|Q9H3D4-4|TP63', 'nc|ENSG00000073282|Q9H3D4-5|TP63', 'nc|ENSG00000073282|Q9H3D4-3|TP63', 'nc|ENSG00000073282|Q9H3D4-10|TP63', 'nc|ENSG00000073282|Q9H3D4-7|TP63', 'TP63|p.F306C|1|0.07|ENSG00000073282|chr3:189867867-189867867|T/G|missense_variant'] 29153 9274 FTPNNIKQV True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 41.013 2 0.08496729296227301 0.002983190866846423 0.01326235596474172 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 119354 10033 VAPEEHPVLL True NCI_RA007_Epitope_Rep1 1102.60225998074 1102.60116993586 43.035 2 0.08495414067596345 0.002983190866846423 0.013266214686540042 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 17258 15594 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 64.802 2 0.08495081803527796 0.002983190866846423 0.013267189676342063 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 89492 17154 QYIEELQKF True PC9_epitope_Rep4 1196.6077392839995 1196.60664993586 73.989 2 0.0849468387521534 0.002983190866846423 0.013268357438897834 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'RALGPS2|p.D401Mfs*5|1|0.09|ENSG00000116191|chr1:178889650-178889650|G/-|frameshift_variant', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 139277 20568 YLKDFFSNV True PC9_epitope_Rep5 1131.56006081559 1131.5589699358602 84.161 2 0.08494119171580611 0.002983190866846423 0.013270014787274275 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 77374 12214 NSELSCQLY True H1975_Epitope_Rep3 1055.4593607981499 1055.45877496793 52.154 1 0.08493898223277595 0.002983190866846423 0.013270663301357285 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 44193 23059 IIYPGAFVDL True PC9_epitope_Rep1 1106.60119735158 1106.60010993586 93.497 2 0.08493721414056313 0.002983190866846423 0.013271182282567106 ['ENSG00000012174|ENST00000379484|MBTPS2'] 21753 12904 ERTSFNYAM True PC9_epitope_Rep1 1117.4862442523297 1117.4851499358601 54.507 2 0.08493493904688663 0.002983190866846423 0.013271850110044775 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 32839 11758 GHNAIINTL True PC9_epitope_Rep2 951.5137793295102 951.51268993586 50.561 2 0.08492666676309421 0.002983190866846423 0.013274278610041946 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 78504 14858 NYPDEFTKL True PC9_epitope_Rep6 1125.53423999057 1125.5331499358601 69.126 2 0.08492022848431396 0.002983190866846423 0.013276168989373378 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant', 'NF1|p.P1951Hfs*6|1|0.17|ENSG00000196712|chr17:31334876-31334876|C/-|frameshift_variant', 'NF1|p.E1929Sfs*13|1|0.24|ENSG00000196712|chr17:31330469-31330469|A/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'NF1|p.E1832*|1|0.19|ENSG00000196712|chr17:31327723-31327724|-/T|frameshift_variant', 'NF1|p.E318Kfs*11|1|0.07|ENSG00000196712|chr17:31200484-31200485|AG/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.L1411Sfs*17|1|0.08|ENSG00000196712|chr17:31258400-31258400|C/-|frameshift_variant', 'NF1|p.Q1360Sfs*20|1|0.19|ENSG00000196712|chr17:31249085-31249086|-/T|frameshift_variant', 'NF1|p.A1268Qfs*17|1|0.22|ENSG00000196712|chr17:31235703-31235703|G/-|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.G1160Vfs*6|1|0.31|ENSG00000196712|chr17:31232863-31232863|G/-|frameshift_variant', 'NF1|p.S637Vfs*51|1|0.23|ENSG00000196712|chr17:31225157-31225157|T/-|frameshift_variant', 'NF1|p.F1464Sfs*5|1|0.41|ENSG00000196712|chr17:31259088-31259088|T/-|frameshift_variant', 'nc|ENSG00000196712|P21359-5|NF1'] 33525 6700 GLDVEDVK True H1975_Epitope_Rep3 873.4443623570099 873.44326993586 30.726 2 0.08491993116834175 0.002983190866846423 0.013276256292112775 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 103709 4965 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 26.675 2 0.0849144886873145 0.002983190866846423 0.013277854497172236 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 73002 15655 MRAFADAL True PC9_epitope_Rep1 893.4429228883698 893.44182993586 65.037 2 0.08491343332015375 0.002983190866846423 0.013278164430676656 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 118897 9631 VADGYPVRL True NCI_RA007_Epitope_Rep4 988.5341804209199 988.53308993586 43.895 2 0.08490102125467944 0.002983190866846423 0.013281810037997322 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 140911 5865 YSEGREFRY True H1975_Epitope_Rep2 1205.5465360097699 1205.54488490379 27.545 3 0.08489227078796835 0.002983190866846423 0.013284380745751381 ['nc|ENSG00000103126|O15169-2|AXIN1', 'ENSG00000103126|ENST00000262320|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 4032 18301 AHFPINVVI True PC9_epitope_Rep6 1008.5756513100799 1008.57454993586 83.038 2 0.08488918407281118 0.002983190866846423 0.013285287671122298 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 42332 17225 IEAFTPLLA True H1975_Epitope_Rep2 973.5484335027298 973.54732993586 71.545 2 0.08487496864070763 0.002983190866846423 0.013289465140467603 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2'] 75380 17400 NITDKGIIAL True PC9_epitope_Rep4 1056.6179100448799 1056.6168099358601 74.924 2 0.08486948835165362 0.0030006858710562414 0.013291075955583076 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 111336 3961 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 21.456 2 0.08485957016492492 0.0030006858710562414 0.013293991664143 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 24171 7984 EYQKVGQSF True PC9_epitope_Rep2 1084.5189242795998 1084.5178299358602 36.074 2 0.08485448744166238 0.0030006858710562414 0.013295486095933041 ['nc|ENSG00000178996|Q96RF0-3|SNX18', 'ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 12049 8126 DHSQAVTL True PC9_epitope_Rep5 869.42429561877 869.42318993586 36.195 2 0.08485172775521096 0.0030006858710562414 0.013296297570327402 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 91414 15168 RHIEIFTDL True PC9_epitope_Rep6 1142.6084079903399 1142.60730993586 70.419 2 0.08484736508476277 0.0030006858710562414 0.013297580490631426 ['ENSG00000079246|ENST00000392132|XRCC5'] 92787 20190 RPAGALVALVV True PC9_epitope_Rep5 1064.67061432408 1064.66950993586 82.707 2 0.08483350179667233 0.0030006858710562414 0.013301658008714632 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 86099 11371 QHTPTSITL True PC9_epitope_Rep1 996.52400966004 996.52290993586 48.62 2 0.08482870059493827 0.0030006858710562414 0.013303070429032936 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 42824 12133 IEQEFLTEA True H1975_Epitope_Rep3 1078.51825557326 1078.51714993586 51.838 2 0.08482786787070781 0.0030006858710562414 0.01330331541469434 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 30582 9004 GAIGSPVRL True H1975_Epitope_Rep2 868.51305105352 868.51194993586 39.585 2 0.08482321758875096 0.0030006858710562414 0.013304683595619189 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant'] 93198 8035 RPPPIGAEV True PC9_epitope_Rep4 934.5236157372199 934.52250993586 38.359 2 0.0848201188454199 0.0030006858710562414 0.01330559536472326 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 99168 11839 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 56.745 2 0.08482005145030251 0.0030006858710562414 0.01330561519560432 ['ENSG00000132646|ENST00000379143|PCNA'] 87560 10140 QQLGKVVQV True PC9_epitope_Rep1 997.5920296502098 997.59092993586 43.879 2 0.08481964337128693 0.0030006858710562414 0.013305735272648143 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 1312 5401 AEDRQVSITA True H1975_Epitope_Rep3 1088.5462016566 1088.5451099358602 25.84 2 0.08481471769140655 0.0030006858710562414 0.013307184731910473 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 41184 20373 HVIDLDDATFL True PC9_epitope_Rep4 1257.62411762413 1257.6230299358601 86.509 2 0.08481345811734436 0.0030006858710562414 0.013307555405370828 ['ENSG00000152219|ENST00000282032|ARL14EP'] 134412 22619 VYPGYYLTF True PC9_epitope_Rep1 1121.54334812229 1121.5422499358601 91.813 2 0.08480972838560995 0.0030006858710562414 0.01330865306559694 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 1645 6522 AEFVEVTK True H1975_Epitope_Rep3 921.4807478657299 921.47964993586 30.054 2 0.08480371381943445 0.0030006858710562414 0.013310423332203813 ['CON__P02769'] 7689 8341 ASLPLAVTK True NCI_RA007_Epitope_Rep4 898.5487678559 898.54766993586 38.899 2 0.08480001462750712 0.0030006858710562414 0.013311512225021029 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 110120 9351 TEMPGTLQA True H1975_Epitope_Rep2 946.4429824580199 946.44188993586 40.93 2 0.08478758270498438 0.0030006858710562414 0.013315172295629518 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 25670 5070 FEQEM[Oxidation]ATAA True NCI_RA007_Epitope_Rep4 1012.4171620134398 1012.41606993586 26.003 2 0.08477163765575364 0.0030006858710562414 0.013319868048917435 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 25500 12055 FEGGVVIAA True H1975_Epitope_Rep2 861.4596184983299 861.4590749679301 51.451 1 0.0847636757449228 0.0030006858710562414 0.013322213383182036 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 28869 13938 FTDEEVDELY True H1975_Epitope_Rep3 1258.52412879934 1258.52357496793 58.927 1 0.08475559827770553 0.0030006858710562414 0.013324593153931329 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 47543 6784 IVSSITAS True H1975_Epitope_Rep3 776.42798401688 776.42743496793 31.049 1 0.08475281548612476 0.0030006858710562414 0.013325413108279142 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENST00000425085.1_1_21:24780104-24780850:-|nuORF', 'ENST00000442739.1_1_22:21363397-21363730:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 127646 10155 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 43.937 1 0.08473331268322486 0.0030006858710562414 0.013331160975503178 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 9089 18674 AVIGDVIRV True PC9_epitope_Rep3 940.57056592964 940.56946993586 77.048 2 0.08472707886547517 0.0030006858710562414 0.013332998698651764 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 107591 5909 SVPLPISHK True NCI_RA007_Epitope_Rep4 976.5705659296401 976.56946993586 29.352 2 0.08471865887861568 0.0030006858710562414 0.01333548128069921 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF', 'ENST00000480104.5_1_X:47101567-47101732:+|nuORF'] 8422 19830 ATMPDLYHL True PC9_epitope_Rep5 1059.50591706775 1059.50480993586 81.322 2 0.08471368581376731 0.0030006858710562414 0.013336947763024902 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000373473.5_1_20:36374873-36393614:+|nuORF'] 99166 11682 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 56.066 2 0.08470878472189906 0.0030006858710562414 0.013338393170072703 ['ENSG00000132646|ENST00000379143|PCNA'] 14923 17055 DYDSVFHHL True PC9_epitope_Rep3 1131.4985231881901 1131.49687490379 70.755 3 0.08470214364677732 0.0030006858710562414 0.013340351960025648 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'EPC1|p.S472L|1|0.26|ENSG00000120616|chr10:32285027-32285027|G/A|missense_variant', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 11867 15602 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52760993586 65.292 2 0.08470199811417832 0.0030006858710562414 0.01334039488800267 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 106907 3117 SVDPKNYPK True NCI_RA007_Epitope_Rep2 1046.53965972418 1046.53856993586 16.745 2 0.08470189692461046 0.0030006858710562414 0.013340424736123464 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 47246 14264 IVCDVPSASA True PC9_epitope_Rep3 960.45863252216 960.45752993586 59.95 2 0.08469609304797118 0.0030006858710562414 0.013342136824210324 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 35707 8225 GTFDPDNLEK True NCI_RA007_Epitope_Rep3 1134.5193182024198 1134.51822993586 39.489 2 0.08468806152473317 0.0030006858710562414 0.01334450638776857 ['ENSG00000182154|ENST00000371443|MRPL41'] 128744 6656 VPYGVGKAA True PC9_epitope_Rep5 860.4756029156398 860.4745099358599 30.574 2 0.08468584013559667 0.0030006858710562414 0.013345161840545659 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 115123 11653 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 49.841 2 0.08468314352711252 0.0030006858710562414 0.013345957554327501 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 43883 21985 IHVDFPVIL True PC9_epitope_Rep1 1051.60661708519 1051.6055299358602 89.387 2 0.08467025501379301 0.0030006858710562414 0.013349761306571152 ['ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 113987 7393 TPAKAIAAV True PC9_epitope_Rep5 840.5069030439199 840.50580993586 33.394 2 0.0846649165744852 0.0030006858710562414 0.013351337124551586 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 134256 18561 VYNENLVHMI True PC9_epitope_Rep2 1230.60669373818 1230.60558993586 76.747 2 0.08465969069606057 0.0030006858710562414 0.01335287988597484 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 41195 15663 HVIGSLAEI True PC9_epitope_Rep2 937.5232813840499 937.52218993586 65.523 2 0.08465384777674771 0.0030006858710562414 0.013354605006185216 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 74464 10590 NEVTDYAIA True H1975_Epitope_Rep1 994.46074069714 994.4601949679301 45.688 1 0.08464543114928223 0.0030006858710562414 0.013357090381602385 ['ENSG00000076003|ENST00000264156|MCM6'] 90216 4169 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 21.154 2 0.08464263473026833 0.0030006858710562414 0.013357916242292614 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 84993 12385 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 55.92 2 0.08464209983693417 0.0030006858710562414 0.013358074216717636 ['ENSG00000113369|ENST00000265138|ARRDC3'] 108290 18922 SYILRPVAF True PC9_epitope_Rep4 1064.60186605792 1064.6007699358602 80.87 2 0.0846414367650148 0.0030006858710562414 0.0133582700496133 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant'] 96493 13673 SADDTYLQL True NCI_RA007_Epitope_Rep4 1024.47130538084 1024.4707749679299 59.816 1 0.08464070297214775 0.0030006858710562414 0.01335848677251434 ['nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'PLEKHA7|p.F829Sfs*28|1|0.08|ENSG00000166689|chr11:16794937-16794944|TTCTGAAG/-|frameshift_variant'] 49942 16729 KILPTLEAV True PC9_epitope_Rep4 982.60628273202 982.60518993586 72.316 2 0.0846351066390867 0.0030006858710562414 0.013360139736796471 ['ENSG00000143621|ENST00000361891|ILF2'] 1513 4629 AEEM[Oxidation]ETGNVA True H1975_Epitope_Rep2 1065.4284549731299 1065.42734993586 22.905 2 0.08462390253709345 0.0030006858710562414 0.013363449621490517 ['ENSG00000162783|ENST00000367577|IER5'] 7275 11291 ARDFTVSAM True PC9_epitope_Rep4 996.4698659121999 996.46876993586 51.208 2 0.08462038303426193 0.0030006858710562414 0.013364489502483578 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'EIF4A1|p.H293D|1|0.08|ENSG00000161960|chr17:7577677-7577677|C/G|missense_variant'] 77095 21023 NRLQYLIDL True PC9_epitope_Rep1 1146.6397081186199 1146.6386099358601 85.693 2 0.08461453703208863 0.0030006858710562414 0.013366216944983479 ['ENSG00000137547|ENST00000260102|MRPL15', 'MRPL15|p.N170Mfs*106|1|0.14|ENSG00000137547|chr8:54142736-54142736|A/-|frameshift_variant'] 57821 8221 LEESSPIAA True H1975_Epitope_Rep2 915.4549270407099 915.4543749679301 36.576 1 0.08461204849034394 0.0030006858710562414 0.013366952351047578 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 108762 20536 SYSMIVNNL True PC9_epitope_Rep3 1039.50083168731 1039.4997299358602 84.255 2 0.08460566823193733 0.0030006858710562414 0.013368837998969266 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 105790 3603 SSHVQQQAL True NCI_RA007_Epitope_Rep4 996.49885754136 996.49776993586 19.916 2 0.08459402795875047 0.0030006858710562414 0.013372278858252411 ['ENSG00000136935|ENST00000373555|GOLGA1', 'ENST00000475407.5_2_9:127642811-127683993:-|nuORF'] 6142 10855 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 47.072 2 0.08459309093381884 0.0030006858710562414 0.01337255587861686 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 54482 14625 KYGSVTVW True PC9_epitope_Rep5 938.48616759934 938.48506993586 61.257 2 0.08458892352469194 0.0030006858710562414 0.013373787989361893 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 71332 23560 LYQILQGIVF True PC9_epitope_Rep2 1192.6855956818797 1192.68448993586 96.099 2 0.08458890160422 0.0030006858710562414 0.013373794470517203 ['ENSG00000170312|ENST00000395284|CDK1'] 109623 8107 TEAGFPEQA True H1975_Epitope_Rep2 948.4188758851598 948.41776993586 36.132 2 0.08458782157683917 0.0030006858710562414 0.013374113802393298 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 121417 14497 VEVTEFEDIK True PC9_epitope_Rep6 1207.59723416995 1207.59612993586 67.646 2 0.08458655357916103 0.0030006858710562414 0.013374488720634268 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 99235 7623 SHMEGVASV True PC9_epitope_Rep3 915.4120166829099 915.41090993586 34.319 2 0.084584292730674 0.0030006858710562414 0.013375157226943666 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 74937 10819 NHLGGGAVVL True PC9_epitope_Rep4 935.51886470995 935.51776993586 49.374 2 0.08457864674855167 0.0030006858710562414 0.013376826814751677 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 87358 5087 QPSQPVTSA True PC9_epitope_Rep3 913.4505103666099 913.44940993586 24.652 2 0.08457785183826465 0.0030006858710562414 0.013377061895451904 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 92870 6602 RPFQGTM[Oxidation]GV True PC9_epitope_Rep2 1007.4858507099498 1007.48474993586 30.807 2 0.08457332372482908 0.0030006858710562414 0.013378401079290916 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 1633 9885 AEFQVKITA True H1975_Epitope_Rep3 1005.5494961318899 1005.54838993586 43.054 2 0.08456166717471945 0.0030006858710562414 0.01338184906962093 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 60801 13065 LHSNGFSL True PC9_epitope_Rep1 873.4344663796501 873.43336993586 55.123 2 0.08456020063779705 0.0030006858710562414 0.013382282928287479 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 88628 11687 QTEEDYTLTM[Oxidation]Y True H1975_Epitope_Rep3 1408.5704277492 1408.5693299358602 50.092 2 0.08454173275454138 0.0030006858710562414 0.013387747579318677 ['nc|ENSG00000166206|P28472-3|GABRB3'] 30793 16431 GANAILGVSL True NCI_RA007_Epitope_Rep2 913.5232813840499 913.5227349679301 68.641 1 0.0845354150381518 0.0030006858710562414 0.01338961747500378 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENO3|p.F106L|1|0.52|ENSG00000108515|chr17:4953719-4953719|T/A|missense_variant', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 34843 18795 GQISEVVVV True PC9_epitope_Rep5 928.5229470308799 928.52184993586 77.307 2 0.0845327543332432 0.0030006858710562414 0.013390405054704076 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 26801 21622 FLADPSAFVAA True PC9_epitope_Rep5 1107.5600608155898 1107.5594749679299 88.209 1 0.0845271315406497 0.0030006858710562414 0.01339206956803598 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 26914 21051 FLDGNEMTL True PC9_epitope_Rep3 1038.46919720586 1038.46867496793 86.252 1 0.08452448135576322 0.0030006858710562414 0.013392854168841317 ['ENSG00000169504|ENST00000374379|CLIC4'] 139497 16082 YLSEEVQAV True PC9_epitope_Rep1 1036.5076908895599 1036.5065899358601 66.674 2 0.08452192913713348 0.0030006858710562414 0.013393609807113445 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000496047.5_1_2:85872080-85873002:+|nuORF'] 127695 8910 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 44.238 2 0.08451939114239253 0.0030006858710562414 0.01339436127387879 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 103808 10326 SPVYVGRVV True PC9_epitope_Rep6 974.5549158654999 974.55380993586 50.418 2 0.08451719550910596 0.0030006858710562414 0.013395011403934814 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 71135 23861 LYLPSFFTY True PC9_epitope_Rep1 1149.57464825057 1149.5740749679298 96.583 1 0.08451522667275746 0.0030006858710562414 0.013395594404350083 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 70942 15563 LYGKIAEAF True PC9_epitope_Rep4 1010.5436824754598 1010.54258993586 67.784 2 0.08450927088448847 0.0030006858710562414 0.01339735814321174 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 22328 10584 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 45.733 2 0.08450146391395207 0.0030006858710562414 0.013399670419512648 ['ENSG00000150787|ENST00000280362|PTS'] 34767 12387 GQFSGFPFEK True NCI_RA007_Epitope_Rep4 1142.53965972418 1142.53856993586 54.643 2 0.08449971088081072 0.0030006858710562414 0.013400189686229495 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 33366 13758 GKVQIPIML True NCI_RA007_Epitope_Rep5 997.5994235297699 997.59832993586 59.601 2 0.08449691156663446 0.0030006858710562414 0.01340101891156345 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 109975 15497 TEIDSIPPLP True H1975_Epitope_Rep2 1080.5702911461199 1080.56918993586 64.767 2 0.08449253883910524 0.0030006858710562414 0.013402314317024452 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2'] 142529 20582 YYITGNLETF True PC9_epitope_Rep4 1219.57610480255 1219.5750099358602 87.321 2 0.08448559257879848 0.0030006858710562414 0.013404372364914366 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 17257 15581 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50708496793 64.754 1 0.08447602167665515 0.0030006858710562414 0.013407208532482716 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 135135 12150 WEIENNPTV True H1975_Epitope_Rep1 1100.51383889916 1100.51274993586 51.753 2 0.08447242352363446 0.0030006858710562414 0.013408274927499087 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 88125 9620 QRSDGPYAL True PC9_epitope_Rep1 1005.4879585044899 1005.48686993586 41.858 2 0.08447027139326428 0.0030006858710562414 0.013408912798737694 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 6066 9109 APLLQPRAA True PC9_epitope_Rep3 935.5552502186699 935.55414993586 39.977 2 0.08446782127338369 0.0030006858710562414 0.013409639026020832 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 35155 19576 GQWSQGLISA True PC9_epitope_Rep3 1045.5192586327698 1045.5181699358602 80.534 2 0.08446556657384599 0.0030006858710562414 0.013410307362470536 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 57813 13748 LEESFVPVAA True H1975_Epitope_Rep2 1060.54407639828 1060.5429699358601 58.027 2 0.08445894843725281 0.0030006858710562414 0.013412269286851413 ['ENSG00000182768|ENST00000379095|NGRN', 'ENST00000561573.1_1_15:90806992-90815017:+|nuORF'] 77985 16794 NVPDSFNEV True PC9_epitope_Rep5 1019.45598966987 1019.4554749679301 69.606 1 0.08445596943753939 0.0030006858710562414 0.013413152489443846 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 6326 8518 APRPTIINA True PC9_epitope_Rep2 951.5501648382299 951.54906993586 38.127 2 0.08444707948050517 0.0030006858710562414 0.013415788475630934 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 87746 11779 QRATIDPEL True PC9_epitope_Rep3 1041.5454733806098 1041.54436993586 50.326 2 0.08444392425769223 0.0030006858710562414 0.013416724156801526 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1'] 1325 14904 AEDTISILP True H1975_Epitope_Rep1 957.5018772331299 957.50078993586 62.566 2 0.08444316023099352 0.0030006858710562414 0.013416950738114232 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 79243 6010 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 30.622 2 0.08444225711792262 0.0030006858710562414 0.013417218571806902 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 114793 18484 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 76.432 2 0.08444103740072485 0.0030006858710562414 0.013417580307875057 ['ENSG00000119616|ENST00000341162|FCF1'] 2102 10030 AELGEAPVP True NCI_RA007_Epitope_Rep4 881.4494477374499 881.4488949679301 45.424 1 0.08443965015227005 0.0030006858710562414 0.013417991740463025 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 98858 7557 SGTSEFLNK True PC9_epitope_Rep3 981.4767251144499 981.47562993586 34.069 2 0.08443726441860783 0.0030006858710562414 0.013418699333307369 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 30669 6245 GALALEEK True PC9_epitope_Rep4 829.4545331178899 829.45342993586 31.066 2 0.08443186443131238 0.0030006858710562414 0.0134203010635177 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 34861 23256 GQLDFSEFL True PC9_epitope_Rep3 1054.49712620586 1054.49657496793 94.731 1 0.08442897356043423 0.0030006858710562414 0.013421158620047311 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 107008 11758 SVFESLIAK True NCI_RA007_Epitope_Rep3 992.5542471591598 992.55314993586 53.36 2 0.08442892224312833 0.0030006858710562414 0.013421173843431129 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 24543 4587 FAGDDAPRA True NCI_RA007_Epitope_Rep4 918.4195445915 918.4184499358599 24.05 2 0.08442616090092037 0.0030006858710562414 0.013421993025202052 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 76415 16747 NQDKNFAFL True PC9_epitope_Rep4 1095.53490869691 1095.53380993586 72.385 2 0.08441442624078754 0.0030006858710562414 0.013425474762633 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 84888 6591 QEARPPLVSA True H1975_Epitope_Rep3 1066.5771078620598 1066.5760099358602 30.306 2 0.08440941205284268 0.0030006858710562414 0.013426962758518856 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 117979 11179 TYDKGYQF True PC9_epitope_Rep1 1020.45526139388 1020.45416993586 47.884 2 0.08440214429484907 0.0030006858710562414 0.013429119792726499 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 96187 10134 RYPDSHQLF True PC9_epitope_Rep4 1161.55670677065 1161.5550749037902 46.658 3 0.08440152719987282 0.0030006858710562414 0.013429302958441277 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 134767 14674 VYTTTVHW True PC9_epitope_Rep5 1005.49198125577 1005.49088993586 61.447 2 0.08439619736639196 0.0030006858710562414 0.013430885053830374 ['ENSG00000174231|ENST00000304992|PRPF8'] 7083 9888 AQSESILKV True PC9_epitope_Rep6 973.54441075145 973.54330993586 48.535 2 0.08439073177618539 0.0030006858710562414 0.013432507629017711 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 137598 7165 YEERVQAVVA True H1975_Epitope_Rep2 1162.59823722946 1162.5971499358602 32.493 2 0.0843863778832447 0.0030006858710562414 0.013433800305484696 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 87955 12728 QRLPEPATL True PC9_epitope_Rep1 1023.5712942056299 1023.57018993586 53.832 2 0.08438595140462954 0.0030006858710562414 0.013433926933831863 ['ENSG00000107281|ENST00000371601|NPDC1'] 89088 18150 QVPDDLPNV True PC9_epitope_Rep3 995.4923751785899 995.49126993586 75.015 2 0.08437833222722664 0.0030006858710562414 0.01343618937913677 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 57761 11277 LEEPLTQVA True H1975_Epitope_Rep2 998.52842633414 998.5278749679301 48.423 1 0.08437318772906567 0.0030006858710562414 0.013437717193691337 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 55100 8196 LAAARLAAA True PC9_epitope_Rep3 826.5024863698198 826.50138993586 36.505 2 0.08437195884102089 0.0030006858710562414 0.01343808217339908 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 137344 8044 YDM[Oxidation]LESIR True NCI_RA007_Epitope_Rep1 1041.4800966231699 1041.47898993586 35.286 2 0.08436716799513908 0.0030006858710562414 0.013439505143506034 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 41485 14206 HYLPDLHHL True PC9_epitope_Rep5 1143.5825275956702 1143.5808749037901 59.651 3 0.08436013034724671 0.0030006858710562414 0.013441595712530919 ['ENSG00000130702|ENST00000252999|LAMA5'] 41080 13118 HTPQNLITV True PC9_epitope_Rep1 1021.5556441414899 1021.55454993586 55.326 2 0.08435990647851808 0.0030006858710562414 0.013441662218892834 ['ENST00000560311.1_1_14:24634973-24635402:+|nuORF', 'ENST00000557894.5_1_14:24634074-24635402:+|nuORF', 'ENST00000561415.1_1_14:24633725-24635402:+|nuORF', 'ENSG00000213928|ENST00000396864|IRF9'] 121974 7388 VFTSRSAAF True NCI_RA007_Epitope_Rep3 984.5028802926398 984.50178993586 36.188 2 0.08433939434536947 0.0030006858710562414 0.013447757225758987 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 14048 11775 DRMVGQVL True PC9_epitope_Rep4 916.4800366730798 916.47892993586 53.06 2 0.08433606782236261 0.0030006858710562414 0.013448745918886682 ['ENSG00000130741|ENST00000253039|EIF2S3'] 107827 18892 SVVDGTPLV True PC9_epitope_Rep1 885.48074786573 885.4801949679301 77.453 1 0.08433005746458165 0.0030006858710562414 0.013450532461821966 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 17411 12033 EHDPSSIYL True PC9_epitope_Rep6 1059.48728979815 1059.48618993586 57.579 2 0.08432911646503208 0.0030006858710562414 0.013450812188525568 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'HEATR5B|p.G877Wfs*15|1|0.44|ENSG00000008869|chr2:37049720-37049721|-/A|frameshift_variant', 'HEATR5B|p.R763C|1|0.1|ENSG00000008869|chr2:37056552-37056552|G/A|missense_variant', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 121054 9390 VEQQSVFTA True H1975_Epitope_Rep2 1007.4923751785898 1007.49126993586 41.082 2 0.08432610733423504 0.0030006858710562414 0.013451706736030912 ['nc|ENSG00000155755|Q96Q45-4|TMEM237', 'nc|ENSG00000155755|Q96Q45-2|TMEM237', 'ENSG00000155755|ENST00000409883|TMEM237', 'nc|ENSG00000155755|Q96Q45-5|TMEM237', 'nc|ENSG00000155755|Q96Q45-3|TMEM237'] 139375 18601 YLMEVTHDL True PC9_epitope_Rep5 1119.52704643515 1119.5259499358601 76.573 2 0.0843239795623016 0.0030006858710562414 0.013452339308968006 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 93104 8515 RPNPPPVSV True PC9_epitope_Rep5 961.53451477409 961.53340993586 37.695 2 0.08432111235069013 0.0030006858710562414 0.013453191756831089 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 14422 12718 DTDSINLY True H1975_Epitope_Rep2 939.4185415319901 939.4179949679301 54.02 1 0.08431451741079164 0.0030006858710562414 0.013455152684770596 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 108049 20943 SYADQMFLL True PC9_epitope_Rep6 1086.50558271458 1086.5044899358602 93.341 2 0.08427037213603936 0.0030006858710562414 0.013468285688413342 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 35033 17462 GQVEDVVGNL True PC9_epitope_Rep6 1028.5138388991597 1028.51274993586 79.79 2 0.08426920415291109 0.0030006858710562414 0.013468633321354829 ['ENSG00000196878|ENST00000356082|LAMB3'] 486 8883 AAMPGFIAK True NCI_RA007_Epitope_Rep4 904.4840594243599 904.48296993586 40.995 2 0.08426825579245852 0.0030006858710562414 0.013468915593056347 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 20744 8190 EQEVNILK True PC9_epitope_Rep6 971.5287606873098 971.52766993586 41.067 2 0.08426337670851168 0.0030006858710562414 0.013470367900283341 ['ENSG00000100345|ENST00000216181|MYH9'] 71989 5294 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 25.419 2 0.0842544944001268 0.0030006858710562414 0.013473012184706945 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 57866 5450 LEFEHQRAP True NCI_RA007_Epitope_Rep3 1125.55670677065 1125.5550749037902 28.449 3 0.08425334898779903 0.0030006858710562414 0.013473353212229866 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 106885 18972 SVDEVEISV True PC9_epitope_Rep5 975.4760564081099 975.4755049679301 78.0 1 0.08424041720394655 0.0030006858710562414 0.013477203999700907 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000556963.5_1_14:77924568-77929110:+|nuORF'] 73506 21332 MVGEGFIEV True PC9_epitope_Rep3 979.4684689298699 979.46792496793 87.35 1 0.08423975870271458 0.0030006858710562414 0.013477400113900433 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 34979 22260 GQSELTLLL True PC9_epitope_Rep3 972.54916177872 972.54806993586 90.909 2 0.08423092885301425 0.0030006858710562414 0.013480030070501558 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 60803 13008 LHSNGFSL True PC9_epitope_Rep5 873.4344663796501 873.43336993586 55.043 2 0.08422256796218368 0.0030006858710562414 0.013482520793361456 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 85272 17812 QEQLLAILP True H1975_Epitope_Rep3 1023.5964463243098 1023.5953499358601 74.521 2 0.08421749058141036 0.0030006858710562414 0.013484033564515436 ['ENSG00000171222|ENST00000305978|SCAND1'] 77499 14012 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41867496793 59.058 1 0.08421255084415168 0.0030006858710562414 0.013485505478924733 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 25688 7835 FEQKGPVYVA True H1975_Epitope_Rep2 1136.5866099165999 1136.58550993586 35.086 2 0.08421245851024302 0.0030006858710562414 0.013485532993488814 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 33 4578 AAAAPLGAR True PC9_epitope_Rep5 796.4555361774 796.45442993586 22.671 2 0.08421100673663862 0.0030006858710562414 0.013485965614173723 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 98343 6230 SEYIHAQVA True H1975_Epitope_Rep2 1016.4927095317598 1016.49160993586 28.925 2 0.08419651749890819 0.003023733455043359 0.013490284043964651 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 111047 18594 THDGGFLSL True PC9_epitope_Rep5 945.45559574705 945.45448993586 76.546 2 0.08418674908654035 0.003023733455043359 0.013493196194207493 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 7568 13230 ASETGFLTY True H1975_Epitope_Rep1 987.4549270407099 987.4543749679301 55.987 1 0.0841843568011482 0.003023733455043359 0.013493909470282287 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 83281 16976 PTDAFTVFY True H1975_Epitope_Rep1 1059.49131254943 1059.4907749679298 70.722 1 0.08417817421196797 0.003023733455043359 0.01349575301532462 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1'] 21591 4400 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 24.044 2 0.08417621263457734 0.003023733455043359 0.013496337974504866 ['ENSG00000180921|ENST00000388913|FAM83H'] 32869 8670 GHSEAVISV True PC9_epitope_Rep2 897.45559574705 897.45448993586 38.714 2 0.08417443541742338 0.003023733455043359 0.013496867976472236 ['ENSG00000073536|ENST00000442241|NLE1', 'ENST00000593176.1_1_17:33464206-33469153:-|nuORF'] 75422 20875 NIVNSIVGV True PC9_epitope_Rep3 913.5232813840499 913.52218993586 85.568 2 0.08416677134318924 0.003023733455043359 0.013499153782068915 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10'] 10071 7794 AYSVEHNQL True PC9_epitope_Rep2 1059.49852318819 1059.49742993586 35.351 2 0.08415676997934157 0.003023733455043359 0.013502137230460742 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 98914 17028 SHADVVNLL True PC9_epitope_Rep1 966.51344497634 966.51234993586 70.322 2 0.08415323366518988 0.003023733455043359 0.013503192276052258 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 14896 23070 DYATIFNNL True PC9_epitope_Rep1 1069.5080252427301 1069.5069299358602 93.539 2 0.08414132772998299 0.003023733455043359 0.013506744935532528 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 43702 6742 IHDSQAPSL True PC9_epitope_Rep2 966.47705946762 966.47596993586 31.341 2 0.0841378339376061 0.003023733455043359 0.013507787628983263 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 35772 15698 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.51670993586 65.205 2 0.08412897037220189 0.003023733455043359 0.013510433226438714 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 40539 17436 HRFPFSSAL True PC9_epitope_Rep1 1060.5454138109599 1060.5443099358602 71.865 2 0.08411323450836 0.003023733455043359 0.013515131268412847 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 142018 15698 YVLEGLKSV True PC9_epitope_Rep4 1006.5698972232999 1006.56880993586 68.308 2 0.08411163256077475 0.003023733455043359 0.013515609626179585 ['ENST00000481600.5_1_10:127417653-127452038:+|nuORF', 'nc|ENSG00000107938|Q3B7T1-5|EDRF1', 'ENSG00000107938|ENST00000356792|EDRF1', 'nc|ENSG00000107938|Q3B7T1-3|EDRF1', 'ENST00000525091.5_1_10:127408310-127436620:+|nuORF'] 106555 5205 STMGYMAAK True NCI_RA007_Epitope_Rep5 958.4252242188999 958.42412993586 26.718 2 0.08411162406927378 0.003023733455043359 0.01351561216187017 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 96185 10866 RYPDSHQLF True PC9_epitope_Rep2 1161.55670677065 1161.5550749037902 47.113 3 0.08410785258824272 0.003023733455043359 0.013516738427356886 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 75111 11450 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56087496793 51.81 1 0.08410773786500202 0.003023733455043359 0.013516772688179633 ['ENSG00000171223|ENST00000302754|JUNB'] 104723 20466 SQVEEELFSV True PC9_epitope_Rep4 1165.55028397753 1165.54918993586 86.868 2 0.08410668832717318 0.003023733455043359 0.01351708612479655 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 76913 12517 NRDNVGLVL True PC9_epitope_Rep6 998.5508931142199 998.54978993586 59.577 2 0.08410563287459098 0.003023733455043359 0.013517401334703234 ['ENSG00000013523|ENST00000251089|ANGEL1'] 21857 10058 ESDDGVVVY True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 43.68 1 0.08409258613562927 0.003023733455043359 0.01352129830172794 ['ENSG00000137628|ENST00000393743|DDX60'] 133633 22431 VYAFSIENF True PC9_epitope_Rep3 1088.5178616504397 1088.51676993586 91.557 2 0.08408328823115072 0.003023733455043359 0.013524076163604874 ['nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS', 'ENST00000528557.5_1_1:26759436-26769365:+|nuORF'] 46317 11772 ISQIVSSITAS True NCI_RA007_Epitope_Rep2 1104.60265390356 1104.6020749679299 50.389 1 0.08408311081335859 0.003023733455043359 0.01352412917454245 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 50049 9465 KKFENEIIL True NCI_RA007_Epitope_Rep2 1132.6492101731599 1132.64810993586 41.428 2 0.0840824057579711 0.003023733455043359 0.013524339841067533 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 91632 11556 RIPTAGIYGA True PC9_epitope_Rep4 1017.5607295219298 1017.55962993586 52.211 2 0.08406936526975034 0.003023733455043359 0.01352823682092448 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 45594 7014 IQVRETQAL True NCI_RA007_Epitope_Rep4 1056.5927579262 1056.5916699358602 33.607 2 0.08405732352467898 0.003023733455043359 0.013531836277123803 ['ENSG00000141543|ENST00000649764|EIF4A3'] 89821 15335 RALTVPEL True PC9_epitope_Rep2 897.5283667644899 897.52726993586 64.266 2 0.0840491509444941 0.003023733455043359 0.013534279695555412 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 103291 5631 SPLNTPHTSA True PC9_epitope_Rep5 1023.4985231881901 1023.4974299358599 26.66 2 0.08404897121931752 0.003023733455043359 0.013534333434019828 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 100629 22245 SLDDLLTNV True PC9_epitope_Rep5 988.5076908895601 988.50658993586 90.573 2 0.08404614567956357 0.003023733455043359 0.013535178306788494 ['ENSG00000143819|ENST00000272167|EPHX1'] 74729 8638 NHANGLTL True PC9_epitope_Rep1 838.4297153523801 838.42860993586 38.064 2 0.08404193312126754 0.003023733455043359 0.013536438008049339 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 27186 19375 FLLPHPGLQV True PC9_epitope_Rep4 1119.6440652230701 1119.64296993586 82.636 2 0.08402834950497745 0.003023733455043359 0.013540500732103068 ['ENSG00000184743|ENST00000398868|ATL3'] 17269 14919 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 62.647 2 0.0840223349180517 0.003023733455043359 0.013542300001242942 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 6137 12897 APMPPIIHA True PC9_epitope_Rep6 945.51060852537 945.50950993586 61.138 2 0.08401185566445424 0.003023733455043359 0.013545435416571027 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 3279 5193 AGFAGDDAPR True PC9_epitope_Rep4 975.4410083120698 975.43990993586 26.677 2 0.08401033292484836 0.003023733455043359 0.013545891080350186 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 66151 12535 LSEPEEAAALY True H1975_Epitope_Rep2 1191.5659340416698 1191.56537496793 53.31 1 0.08400645462646451 0.003023733455043359 0.013547051685373377 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF'] 112797 23113 TLIEDILGV True PC9_epitope_Rep4 971.5539128059899 971.55280993586 97.124 2 0.0839990263894834 0.003023733455043359 0.013549274892763237 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 90868 4764 REVDPPM[Oxidation]GP True H1975_Epitope_Rep1 1012.4647809121999 1012.46368993586 23.383 2 0.08399468504448791 0.003023733455043359 0.013550574378790127 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 71439 15877 LYTEKFEEF True PC9_epitope_Rep6 1204.5652057656796 1204.5641099358602 73.35 2 0.0839853941257044 0.003023733455043359 0.013553355804517652 ['ENSG00000084652|ENST00000373610|TXLNA'] 105069 8367 SRDQSTPII True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 37.555 2 0.08397699961735326 0.003023733455043359 0.013555869333159047 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 65945 12650 LSDTEVLEY True H1975_Epitope_Rep1 1067.50227115595 1067.5016749679298 53.711 1 0.08396405699719431 0.003023733455043359 0.013559745540653773 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 107328 20798 SVLGAITSV True PC9_epitope_Rep1 845.48583324617 845.48528496793 84.825 1 0.08395339737468742 0.003023733455043359 0.013562938791878467 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 84938 8640 QEEEEEARWRR True PC9_epitope_Rep1 1516.7018674341996 1516.70023490379 38.072 3 0.08394597487929695 0.003023733455043359 0.01356516273026343 ['ENST00000334512.9_1_10:80878754-80899516:+|nuORF'] 118406 14333 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47107496793 60.396 1 0.08393507698762205 0.003023733455043359 0.0135684285929929 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 32580 10197 GGGTGSGFTSL True H1975_Epitope_Rep3 939.42977492203 939.42922496793 44.269 1 0.08392726355000085 0.003023733455043359 0.013570770566485367 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'nc|ENSG00000178462|A6NHL2-2|TUBAL3', 'ENSG00000178462|ENST00000380419|TUBAL3', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 117023 8295 TVIAKVNNV True PC9_epitope_Rep1 956.5654805492 956.56438993586 36.741 2 0.0839214300085854 0.003023733455043359 0.013572519340360521 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 103527 13493 SPRPPLISV True PC9_epitope_Rep4 964.57056592964 964.56946993586 59.798 2 0.08392014413558635 0.003023733455043359 0.013572904846727282 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 65403 15891 LREPLPATL True PC9_epitope_Rep1 1008.59678067748 1008.59568993586 65.935 2 0.08391411804081925 0.003023733455043359 0.013574711614811606 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 33381 19306 GLAAGGIVAV True PC9_epitope_Rep3 826.4912529797799 826.49014993586 79.483 2 0.08390978932668523 0.003023733455043359 0.013576009606932383 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 53135 10368 KPYESYIGA True PC9_epitope_Rep2 1026.5022115862998 1026.50110993586 45.205 2 0.08390711306746532 0.003023733455043359 0.013576812158442534 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 40534 12991 HRFGGLVL True PC9_epitope_Rep4 897.5184707871299 897.51736993586 57.862 2 0.08390406967515811 0.003023733455043359 0.013577724859327634 ['ENSG00000007520|ENST00000007390|TSR3'] 134796 13604 VYTVVDEM[Oxidation]F True NCI_RA007_Epitope_Rep5 1117.50016336141 1117.49957496793 59.015 1 0.08388368451925635 0.003023733455043359 0.013583839771515586 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 87998 13804 QRNPQGFVL True PC9_epitope_Rep3 1057.5668775315298 1057.56578993586 58.173 2 0.08388066268478422 0.003023733455043359 0.013584746448115756 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 59778 15086 LGEHNIDVLE True PC9_epitope_Rep5 1137.56660274801 1137.56550993586 63.035 2 0.0838752564315727 0.003023733455043359 0.013586368691919749 ['CON__P00761'] 87344 10403 QPSEVLRTV True PC9_epitope_Rep5 1027.56620882519 1027.5651099358602 45.001 2 0.08387240101242315 0.003023733455043359 0.013587225585448361 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 97368 10462 SEDLPLNISR True NCI_RA007_Epitope_Rep2 1142.59315184902 1142.5920499358601 45.289 2 0.08387132837264417 0.003023733455043359 0.013587547491103674 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 132225 16297 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 70.644 2 0.08386454931109542 0.003023733455043359 0.01358958209414793 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 49139 6689 KELAETIAA True H1975_Epitope_Rep3 944.5178616504398 944.51676993586 30.684 2 0.08386136604735878 0.003023733455043359 0.01359053758747032 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 21422 16834 ERIPDVAAL True PC9_epitope_Rep5 982.5447451046199 982.54364993586 69.761 2 0.0838495999410121 0.003023733455043359 0.01359406986820569 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 73027 8424 MRDGHYTTF True PC9_epitope_Rep5 1126.4865786055 1126.48492490379 37.343 3 0.08384559541362688 0.003023733455043359 0.013595272256723617 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11'] 103712 5186 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 27.697 2 0.0838435107243989 0.003023733455043359 0.013595898239423058 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 55545 8774 LAGPLRPAA True PC9_epitope_Rep5 864.5181364339599 864.51702993586 38.692 2 0.08383436988770557 0.003023733455043359 0.013598643335655157 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 16037 7482 EDVFVHQTAIK True NCI_RA007_Epitope_Rep2 1285.6666511424498 1285.66501490379 33.731 3 0.08383052393867674 0.003023733455043359 0.013599798473207535 ['ENSG00000065978|ENST00000321358|YBX1', 'ENSG00000006047|ENST00000007699|YBX2', 'nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3'] 99881 19183 SILSEVQQA True PC9_epitope_Rep1 973.50802524273 973.50692993586 78.582 2 0.0838252396318285 0.003023733455043359 0.013601385774511464 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 118650 13382 TYSPALNKM[Oxidation]F True PC9_epitope_Rep3 1186.5692459807399 1186.5681499358602 56.505 2 0.08382395122826562 0.003023733455043359 0.013601772811878294 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 96335 10506 RYSSMAASF True PC9_epitope_Rep4 1018.4542158480599 1018.45310993586 48.134 2 0.08382369765411979 0.003023733455043359 0.013601848986955446 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 85784 4984 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 24.54 2 0.08380823987516035 0.0030435771987711913 0.013606493346818549 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 120669 10276 VEINENLPA True H1975_Epitope_Rep2 997.5080252427299 997.50692993586 44.533 2 0.0838039240046762 0.0030435771987711913 0.013607790335909408 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 90861 9729 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 42.409 2 0.08379949295100159 0.0030435771987711913 0.013609122060337231 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 134391 18893 VYPGDPLRF True PC9_epitope_Rep2 1062.5498304850598 1062.5487299358601 78.036 2 0.08379433706699578 0.0030435771987711913 0.013610671782042545 ['ENSG00000170892|ENST00000396388|TSEN34'] 6325 8425 APRPTIINA True PC9_epitope_Rep2 951.5501648382299 951.54906993586 37.776 2 0.08378672856122028 0.0030435771987711913 0.013612958999720965 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 8743 21654 AVDAFFTAV True PC9_epitope_Rep2 939.4701831820299 939.46908993586 88.768 2 0.08378209321062476 0.0030435771987711913 0.01361435262466523 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 29353 18253 FVDGSAIQV True PC9_epitope_Rep5 934.47599683846 934.47488993586 75.224 2 0.08377999540205135 0.0030435771987711913 0.01361498337796933 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 29329 16311 FVDEPLIHATT True PC9_epitope_Rep5 1241.6292030045697 1241.62810993586 67.736 2 0.08376962739893408 0.0030435771987711913 0.013618101154593524 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 49046 4452 KEGKPPISV True H1975_Epitope_Rep3 953.5545815123298 953.55348993586 22.247 2 0.08376932817439675 0.0030435771987711913 0.013618191144783843 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 28895 14731 FTDGDAALEF True H1975_Epitope_Rep1 1084.4713053808398 1084.47020993586 61.883 2 0.08376023533932173 0.0030435771987711913 0.013620926033258679 ['ENSG00000173545|ENST00000308683|ZNF622'] 120689 16741 VEITPESILSA True H1975_Epitope_Rep2 1157.61796961453 1157.6168699358602 69.629 2 0.08375946314236003 0.0030435771987711913 0.013621158313820107 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 71222 18928 LYPEGLAQL True PC9_epitope_Rep6 1002.5385970950199 1002.53807496793 85.452 1 0.08375830653546887 0.0030435771987711913 0.01362150623370357 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 140271 17027 YRAPEVLL True PC9_epitope_Rep1 959.5440168286299 959.54290993586 70.318 2 0.08375177481931073 0.0030435771987711913 0.013623471201497372 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 18864 10979 ELDRFMHYY True H1975_Epitope_Rep2 1272.55974354576 1272.55810490379 47.257 3 0.0837502573735563 0.0030435771987711913 0.01362392774019188 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF', 'ANKIB1|p.R604I|1|0.27|ENSG00000001629|chr7:92387856-92387856|G/T|missense_variant', 'ANKIB1|p.Q593P|1|0.23|ENSG00000001629|chr7:92387823-92387823|A/C|missense_variant'] 1971 12138 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 51.705 1 0.0837480590202588 0.0030435771987711913 0.013624589162224246 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 75838 21215 NLPIFLPRV True PC9_epitope_Rep5 1067.64915060351 1067.6480499358602 86.651 2 0.08374796314864905 0.0030435771987711913 0.01362461800795397 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 87824 7368 QRFADTHSL True PC9_epitope_Rep1 1073.52540664237 1073.5243099358602 33.154 2 0.08373386148447094 0.0030435771987711913 0.013628861524307168 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 110836 21598 TGPTRFFLF True PC9_epitope_Rep1 1084.5705659296398 1084.56946993586 87.9 2 0.08371547493734446 0.0030435771987711913 0.01363439632695906 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 101534 21010 SLLGDDALVQV True PC9_epitope_Rep4 1128.60265390356 1128.60154993586 88.976 2 0.08371012915665411 0.0030435771987711913 0.013636005934774952 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 88012 16724 QRPAVIGDVL True PC9_epitope_Rep5 1066.61349337078 1066.6123899358602 69.335 2 0.08370961929680652 0.0030435771987711913 0.013636159462261578 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 48037 19633 IYLPYLQNW True NCI_RA007_Epitope_Rep4 1208.6229954253201 1208.62188993586 84.836 2 0.08370044094568409 0.0030435771987711913 0.013638923498075647 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 90265 9755 REEFPTLQA True H1975_Epitope_Rep1 1089.5454733806098 1089.54436993586 42.452 2 0.08367467789686897 0.0030435771987711913 0.013646684785216712 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 105565 15870 SSDGAISLLTY True H1975_Epitope_Rep1 1125.55536935797 1125.55477496793 66.353 1 0.08367416270214277 0.0030435771987711913 0.013646840033333017 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 104020 21477 SQDGSFYFL True PC9_epitope_Rep4 1062.46582607758 1062.4652749679299 90.802 1 0.08366296357191563 0.0030435771987711913 0.01365021517513312 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant'] 35001 5855 GQTGVIRSV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 29.396 2 0.08365150319607861 0.0030435771987711913 0.013653669862206827 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 111589 19758 TIDDGIFEV True PC9_epitope_Rep6 1007.48114178855 1007.48057496793 88.659 1 0.08363749408233785 0.0030435771987711913 0.013657893973027947 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 30979 18589 GASENIVIQV True PC9_epitope_Rep2 1028.5502244078798 1028.54912993586 76.854 2 0.08363577453492888 0.0030435771987711913 0.013658412545763809 ['ENSG00000106804|ENST00000223642|C5'] 73008 15566 MRAFADAL True PC9_epitope_Rep5 893.4429228883698 893.44182993586 64.884 2 0.08361349365575282 0.0030435771987711913 0.013665133578546205 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 88555 13707 QTDFGMYDY True H1975_Epitope_Rep2 1138.4277263166998 1138.42662993586 57.867 2 0.0836048441860807 0.0030435771987711913 0.013667743530751881 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'ENST00000463608.5_1_22:21830433-21838406:-|nuORF', 'ENST00000450651.5_1_22:21830386-21841179:-|nuORF', 'ENST00000492581.5_1_22:21065434-21067334:-|nuORF', 'ENST00000466772.5_1_22:21065465-21081626:-|nuORF', 'ENST00000486209.5_1_22:21830876-21832684:-|nuORF'] 86102 11722 QHTPTSITL True PC9_epitope_Rep3 996.52400966004 996.52290993586 50.107 2 0.08358008216146139 0.0030435771987711913 0.013675217990224031 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 112301 7156 TKTPSSDVL True PC9_epitope_Rep5 946.4971262058599 946.49602993586 32.495 2 0.08357343748815516 0.0030435771987711913 0.013677224349907235 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF'] 92083 4716 RKVSINNTGL True NCI_RA007_Epitope_Rep5 1100.63020606408 1100.62910993586 24.825 2 0.08357055105311334 0.0030435771987711913 0.01367809599541161 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 45307 18629 IPYHIVNIV True PC9_epitope_Rep4 1066.6175161220601 1066.61640993586 79.735 2 0.08356931528793977 0.0030435771987711913 0.013678469187675582 ['ENSG00000031698|ENST00000234677|SARS1'] 40270 19332 HQLESILAM True PC9_epitope_Rep1 1040.5324661687598 1040.53136993586 79.166 2 0.0835690359221355 0.0030435771987711913 0.013678553555481148 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 135079 6124 WEDEGVRA True H1975_Epitope_Rep3 960.4301092751998 960.42900993586 28.568 2 0.08356389131771988 0.0030435771987711913 0.013680107301162004 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 8329 4373 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 23.438 2 0.08356106817242172 0.0030435771987711913 0.013680960002767244 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 23110 15714 EVISKLYAV True PC9_epitope_Rep2 1020.5855472874398 1020.58444993586 65.718 2 0.08355783387775595 0.0030435771987711913 0.013681936949148817 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 126709 16730 VLPGHFNTF True PC9_epitope_Rep1 1030.5236157372199 1030.5225099358602 69.179 2 0.08355513407969564 0.0030435771987711913 0.013682752496465701 ['ENSG00000176055|ENST00000316610|MBLAC2'] 102860 12243 SPAAPVITA True PC9_epitope_Rep2 825.45961849833 825.45852993586 52.403 2 0.08355068781166321 0.0030435771987711913 0.013684095712046143 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 103223 7233 SPKQILDPA True PC9_epitope_Rep6 967.5338460677499 967.53274993586 36.936 2 0.08355040412512764 0.0030435771987711913 0.013684181417827134 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 2237 11838 AENELGVVVA True H1975_Epitope_Rep2 999.5236753068698 999.52256993586 50.611 2 0.08354374291881508 0.0030435771987711913 0.01368619400903127 ['ENSG00000171311|ENST00000370902|EXOSC1'] 3021 4975 AFNQSSRL True PC9_epitope_Rep6 921.4668291370899 921.4657299358599 26.72 2 0.0835386781381265 0.0030435771987711913 0.013687724448522233 ['ENSG00000197013|ENST00000358491|ZNF429'] 109291 21961 TAVPSLFSV True PC9_epitope_Rep1 919.50148331031 919.5009349679301 89.291 1 0.08353436097083848 0.0030435771987711913 0.013689029106481935 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 4107 10644 AHSEPLAL True PC9_epitope_Rep5 836.43921740692 836.43812993586 45.929 2 0.0835318150088784 0.0030435771987711913 0.013689798556870693 ['ENSG00000132017|ENST00000254337|DCAF15'] 114389 15747 TPSPLPTV True PC9_epitope_Rep3 810.4487194614601 810.44762993586 65.728 2 0.08352673332459044 0.0030435771987711913 0.013691334484524632 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 96344 6497 RYSSM[Oxidation]AASF True PC9_epitope_Rep2 1034.44913084806 1034.4480299358602 30.405 2 0.0835222042819548 0.0030435771987711913 0.01369270351397312 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 41180 15296 HVGSGDLFSGM True PC9_epitope_Rep6 1105.48624425233 1105.4851499358601 70.954 2 0.08350749893314326 0.0030435771987711913 0.013697149502852262 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 29389 16707 FVDPNGKISL True PC9_epitope_Rep1 1088.5866099165999 1088.58550993586 69.091 2 0.08348936509194603 0.0030435771987711913 0.013702633924048494 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 86112 12902 QHVPGSPFSV True PC9_epitope_Rep6 1053.52434401321 1053.5232499358601 61.16 2 0.0834859786752511 0.0030435771987711913 0.013703658344732396 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 5 6051 AAAAAAAAAAA True PC9_epitope_Rep3 799.41881631551 799.41770993586 28.326 2 0.0834818181954383 0.0030435771987711913 0.013704917024816571 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 115070 5925 TRDEDHIAL True PC9_epitope_Rep6 1068.51998690876 1068.5188899358602 31.074 2 0.08348093971832993 0.0030435771987711913 0.013705182806526368 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 88802 8716 QTVAVGVIK True PC9_epitope_Rep2 913.5596668927699 913.55856993586 38.887 2 0.08347479455935129 0.0030435771987711913 0.013707042149069912 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 97309 10219 SEALPSDIAA True H1975_Epitope_Rep3 972.47639076128 972.47584496793 44.355 1 0.08347415438675847 0.0030435771987711913 0.01370723585991162 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 38420 14229 HENILGFIA True H1975_Epitope_Rep3 1012.5341804209199 1012.53308993586 60.073 2 0.08347396311824952 0.0030435771987711913 0.013707293736652703 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'ENSG00000107779|ENST00000372037|BMPR1A', 'ENSG00000115170|ENST00000434821|ACVR1', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 57686 5873 LEEGSVEA True H1975_Epitope_Rep2 832.3814277472799 832.38087496793 27.576 1 0.08347129821584275 0.0030435771987711913 0.013708100144550716 ['ENSG00000007080|ENST00000445755|CCDC124'] 27784 20480 FQAEIAQLM True PC9_epitope_Rep4 1049.52156713189 1049.52097496793 86.923 1 0.08346624207334001 0.0030435771987711913 0.013709630271808874 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 142442 18909 YYFEGIKQTF True PC9_epitope_Rep4 1294.6233893481397 1294.6228749679299 80.82 1 0.08346463005587877 0.0030435771987711913 0.013710118146205272 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 1369 6592 AEEDAALQA True H1975_Epitope_Rep3 916.4137905047199 916.41324496793 30.309 1 0.08345744321767139 0.0030435771987711913 0.013712293429330514 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1'] 112501 15490 TLDPQTGLFY True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 64.999 2 0.08344005217090518 0.0030435771987711913 0.013717558623167685 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 118576 22109 TYQVLAVTF True PC9_epitope_Rep1 1040.5542471591598 1040.5531499358601 89.854 2 0.08343824174889863 0.0030435771987711913 0.01371810684326766 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 88030 11801 QRPPTIVL True PC9_epitope_Rep6 922.5600012459399 922.55890993586 56.581 2 0.0834375795417364 0.0030435771987711913 0.013718307373633519 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 75668 7341 NLGGLAVAR True H1975_Epitope_Rep3 869.5083000262499 869.50720993586 33.214 2 0.08342708115680761 0.0030435771987711913 0.01372148687516669 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 115208 14491 TRDSLPVSL True PC9_epitope_Rep4 986.53965972418 986.53856993586 63.65 2 0.08342223553085128 0.0030435771987711913 0.013722954636860317 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 96166 13694 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65405490379 60.563 3 0.08341016978858086 0.0030435771987711913 0.013726610045063571 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 103274 12551 SPLLLQAKA True PC9_epitope_Rep5 939.5753169569099 939.57420993586 53.277 2 0.08340558160121145 0.0030435771987711913 0.013728000311363871 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 61184 22149 LILEPSLYTV True PC9_epitope_Rep2 1146.65362684726 1146.65252993586 90.678 2 0.0834035416661025 0.0030435771987711913 0.013728618474435975 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 6442 8833 APSAQVQQVAA True PC9_epitope_Rep5 1068.55637241748 1068.55526993586 38.921 2 0.08340181830695684 0.0030435771987711913 0.013729140725638645 ['ENST00000533632.5_1_11:118889218-118889467:+|nuORF'] 99312 20125 SHSFVVNIL True PC9_epitope_Rep1 1014.5498304850599 1014.54872993586 82.241 2 0.08339978456440014 0.0030435771987711913 0.013729757060246579 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 105700 11282 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45337496793 48.443 1 0.08338601757834053 0.0030435771987711913 0.013733929889556027 ['ENSG00000115758|ENST00000234111|ODC1'] 108378 19212 SYLERHGLINF True PC9_epitope_Rep3 1347.6935345966297 1347.69187490379 79.117 3 0.08338391574759361 0.0030435771987711913 0.013734567067832116 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 2281 7726 AENVAVPEA True NCI_RA007_Epitope_Rep4 898.4396113297399 898.43850993586 36.39 2 0.08337209810186717 0.0030435771987711913 0.01373815015092305 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 6848 18924 AQGGVLPNI True PC9_epitope_Rep1 867.48141657207 867.48030993586 77.575 2 0.0833653208256115 0.0030435771987711913 0.013740205401836552 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 68304 14609 LTEIMSMGY True H1975_Epitope_Rep2 1043.46675467771 1043.46564993586 61.353 2 0.08336363367572715 0.0030435771987711913 0.0137407170853796 ['nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 25998 17353 FGFEITHEV True PC9_epitope_Rep6 1077.51311062317 1077.51200993586 79.364 2 0.08335979611770161 0.0030435771987711913 0.013741881017410515 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 1735 5798 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 27.327 1 0.0833547180175769 0.0030435771987711913 0.013743421348488181 ['ENSG00000161847|ENST00000617231|RAVER1'] 118398 14763 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47107496793 61.605 1 0.08334570575012239 0.0030435771987711913 0.013746155423012382 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 15041 12690 DYMKTTSNF True PC9_epitope_Rep5 1105.47501086229 1105.47390993586 53.817 2 0.08334017979704436 0.0030435771987711913 0.013747832098220841 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 104058 3901 SQDPGTHVV True PC9_epitope_Rep6 938.4457593393399 938.44466993586 21.672 2 0.08333318617379044 0.0030435771987711913 0.013749954366901395 ['ENSG00000130935|ENST00000253247|NOL11'] 110012 6140 TEISTKEVP True H1975_Epitope_Rep3 1002.5233409536999 1002.52224993586 28.628 2 0.08333241023688899 0.0030435771987711913 0.013750189849883738 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 76936 5745 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 27.489 2 0.08332559024136003 0.0030435771987711913 0.013752259759675043 ['ENSG00000241685|ENST00000262942|ARPC1A'] 34779 20146 GQGEVLVYV True PC9_epitope_Rep1 962.5072969667398 962.5067449679301 82.321 1 0.0833150513645952 0.0030435771987711913 0.013755458948161778 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 38872 7692 HHDSSTFTL True PC9_epitope_Rep4 1043.46722305991 1043.4661299358602 36.969 2 0.08331401546944538 0.0030435771987711913 0.013755773442929881 ['ENSG00000106397|ENST00000223127|PLOD3'] 6131 14497 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 60.762 2 0.08331329447839642 0.0030435771987711913 0.01375599233771234 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 142861 22134 YYTEFPTVL True PC9_epitope_Rep1 1131.54882742555 1131.54827496793 89.951 1 0.08331206895776312 0.0030435771987711913 0.013756364416515936 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 117692 20260 TVTTVILEV True PC9_epitope_Rep4 973.5695628701299 973.56846993586 86.073 2 0.0833108259280838 0.0030435771987711913 0.013756741820879397 ['ENSG00000119203|ENST00000238112|CPSF3'] 97969 6933 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 31.588 1 0.08330848701589265 0.0030435771987711913 0.013757451979668734 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 77283 17095 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.51837496793 71.03 1 0.0833021997155288 0.0030435771987711913 0.013759361149674148 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 138667 22370 YIITEIPSL True PC9_epitope_Rep1 1047.58521293427 1047.5841099358602 90.864 2 0.08329970968338232 0.0030435771987711913 0.013760117329128041 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 26919 19015 FLDGNEMTL True PC9_epitope_Rep6 1038.46919720586 1038.46808993586 85.785 2 0.08329324170375108 0.0030435771987711913 0.013762081724495228 ['ENSG00000169504|ENST00000374379|CLIC4'] 97527 9168 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 40.218 2 0.0832749226056855 0.0030435771987711913 0.01376764686280417 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 104277 16544 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.5754749679301 68.874 1 0.08327475408541776 0.0030435771987711913 0.013767698067201583 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 85916 12541 QHGGFVVTV True PC9_epitope_Rep4 942.4923156089399 942.49120993586 56.058 2 0.08327369974978616 0.0030435771987711913 0.013768018428104658 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 137721 6591 YEMLANRTA True H1975_Epitope_Rep3 1067.5069796969099 1067.50588993586 30.306 2 0.08324637001220808 0.0030435771987711913 0.01377632503956774 ['ENSG00000101310|ENST00000650089|SEC23B'] 17328 19998 EHAPSIIFM True PC9_epitope_Rep5 1043.5110024481899 1043.5099099358602 81.976 2 0.08324610873814764 0.0030435771987711913 0.013776404474029091 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 88016 13668 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 57.428 2 0.08324111785982845 0.0030435771987711913 0.013777921920184523 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 84391 14407 QAALEFHGV True PC9_epitope_Rep1 970.4872302284999 970.48612993586 60.24 2 0.08323597834408059 0.0030435771987711913 0.01377948472276784 ['ENSG00000187231|ENST00000428443|SESTD1'] 72243 18217 MHGIDPVVL True PC9_epitope_Rep5 979.5160878286299 979.51498993586 75.084 2 0.0832318649947515 0.0030435771987711913 0.013780735612918352 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 128212 13640 VPNKFLVTA True PC9_epitope_Rep1 987.5753169569099 987.57420993586 57.322 2 0.08322711419796294 0.0030435771987711913 0.01378218048680646 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 23064 17204 EVIEKFDYV True PC9_epitope_Rep2 1140.5702911461199 1140.56918993586 71.433 2 0.08321726080891545 0.0030435771987711913 0.01378517768092178 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 21268 8264 ERDSQTQAIL True PC9_epitope_Rep2 1159.5833154413099 1159.5822099358602 37.148 2 0.08320207942929703 0.0030435771987711913 0.013789796736542717 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 66564 22311 LSIEQLTTL True PC9_epitope_Rep5 1016.5753765265599 1016.57426993586 90.826 2 0.08319824751824881 0.0030679203476976394 0.013790962855800863 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 58535 8320 LEQIGAPQA True H1975_Epitope_Rep2 925.4868958753299 925.48578993586 36.955 2 0.08319311752507107 0.0030679203476976394 0.013792524149770571 ['ENSG00000168806|ENST00000305641|LCMT2'] 11893 16259 DHIQITAL True PC9_epitope_Rep1 909.49198125577 909.49088993586 67.359 2 0.08318719645792111 0.0030679203476976394 0.013794326410550837 ['ENSG00000089723|ENST00000203664|OTUB2'] 85253 6892 QEQGDAPAI True H1975_Epitope_Rep3 927.4297749220298 927.42866993586 31.469 2 0.08318416084843536 0.0030679203476976394 0.013795250478416973 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 118671 9211 TYSTEPNNL True PC9_epitope_Rep6 1037.46655435357 1037.46544993586 45.569 2 0.08317951551379553 0.0030679203476976394 0.01379666467424005 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 48352 9329 IYSTKLYRF True NCI_RA007_Epitope_Rep4 1189.6495445263297 1189.64844993586 42.741 2 0.08317850935263525 0.0030679203476976394 0.013796971001421807 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 122129 11754 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.4641549679301 50.206 1 0.08317792763574841 0.0030679203476976394 0.013797148108862034 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 134794 13129 VYTVVDEM[Oxidation]F True NCI_RA007_Epitope_Rep3 1117.50016336141 1117.49957496793 58.919 1 0.08317374256576918 0.0030679203476976394 0.013798422343240538 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 39291 20900 HIPDVITYL True PC9_epitope_Rep1 1069.58079626017 1069.5796899358602 85.213 2 0.08316818393604762 0.0030679203476976394 0.013800114958306322 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 52828 12826 KPANLLISA True PC9_epitope_Rep5 925.55966689277 925.55856993586 54.346 2 0.08316306136159476 0.0030679203476976394 0.013801674966283033 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 12006 13952 DHSATIVSI True PC9_epitope_Rep2 941.48181049489 941.48070993586 58.944 2 0.08316138458664704 0.0030679203476976394 0.013802185640491111 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75'] 78177 17637 NYATGQWTRF True PC9_epitope_Rep3 1242.57817049122 1242.5770699358602 73.032 2 0.08315373920973168 0.0030679203476976394 0.013804514321560967 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 97385 12074 SEDPTVPLP True H1975_Epitope_Rep3 953.4705771048499 953.47002496793 51.607 1 0.08315104232212275 0.0030679203476976394 0.013805335846051906 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 74598 21826 NGFPVFATV True PC9_epitope_Rep5 950.48616759934 950.48561496793 88.985 1 0.08314995864340816 0.0030679203476976394 0.01380566596863008 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 115022 6998 TRATEGMVVA True PC9_epitope_Rep2 1033.5226297610498 1033.5215299358601 32.315 2 0.08314969430452478 0.0030679203476976394 0.013805746495682782 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 77302 10506 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.46052496793 45.366 1 0.08314931025554931 0.0030679203476976394 0.0138058634914858 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 3918 8665 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 40.82 2 0.08314612444004806 0.0030679203476976394 0.013806834046957506 ['ENSG00000075618|ENST00000382361|FSCN1'] 109646 4385 TEAPLNPKA True H1975_Epitope_Rep2 939.5025459394699 939.50144993586 21.978 2 0.0831431359812568 0.0030679203476976394 0.013807744536172211 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 87566 10425 QQLGKVVQV True PC9_epitope_Rep3 997.5920296502098 997.59092993586 45.039 2 0.08313359668750452 0.0030679203476976394 0.013810651235759521 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 73550 9376 MVRPVAVAA True PC9_epitope_Rep1 912.5215075622399 912.52040993586 40.922 2 0.08312724031898429 0.0030679203476976394 0.013812588391530609 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 103003 13781 SPFHFQPSA True PC9_epitope_Rep5 1016.47158016436 1016.47048993586 58.028 2 0.08312297114987055 0.0030679203476976394 0.013813889599345009 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19968469-19969442:+|nuORF'] 4304 22018 AIIGGMFTV True PC9_epitope_Rep2 907.48372507119 907.48317496793 90.163 1 0.08312196409394067 0.0030679203476976394 0.013814196558537746 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 103948 16688 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51289496793 72.165 1 0.08311862434842238 0.0030679203476976394 0.013815214587173446 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 72947 23157 MQAPLLIAL True PC9_epitope_Rep1 968.5728744287599 968.5723249679301 93.868 1 0.08306808086140914 0.0030679203476976394 0.013830629971733557 ['ENSG00000196743|ENST00000357164|GM2A'] 97383 12152 SEDPTVPLP True H1975_Epitope_Rep2 953.4705771048499 953.47002496793 51.827 1 0.08306291619559933 0.0030679203476976394 0.013832206065654738 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 31784 14511 GEIENIELP True H1975_Epitope_Rep2 1012.5076908895599 1012.50658993586 60.975 2 0.08305484513521129 0.0030679203476976394 0.013834669437839646 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 76985 14943 NRFPAVNSL True PC9_epitope_Rep3 1016.5403284305199 1016.53922993586 62.611 2 0.08305201887668821 0.0030679203476976394 0.013835532138963274 ['nc|ENSG00000108587|O95249-2|GOSR1', 'ENSG00000108587|ENST00000451249|GOSR1', 'nc|ENSG00000108587|O95249|GOSR1'] 7250 17377 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.5233099358602 72.012 2 0.08303803498461462 0.0030679203476976394 0.01383980139493725 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 127670 10355 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.4914349679301 44.713 1 0.08303743092260162 0.0030679203476976394 0.013839985841813745 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 18550 4586 EKLQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep2 1318.6551008630197 1318.6540099358601 22.464 2 0.08302380221531551 0.0030679203476976394 0.01384414790332881 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 76668 9263 NQSDTSVSL True PC9_epitope_Rep6 949.43525422529 949.43414993586 45.782 2 0.08301285902700081 0.0030679203476976394 0.013847490687049298 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 1114 5044 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 24.483 1 0.0830102866219104 0.0030679203476976394 0.013848276582156515 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 117689 23380 TVTTVILEV True PC9_epitope_Rep2 973.5695628701299 973.56846993586 95.406 2 0.08300926747110834 0.0030679203476976394 0.013848587954357757 ['ENSG00000119203|ENST00000238112|CPSF3'] 138039 11851 YGAQPSATL True PC9_epitope_Rep5 906.44469671018 906.44358993586 50.583 2 0.08300840558512529 0.0030679203476976394 0.01384885128395121 ['ENSG00000239306|ENST00000310137|RBM14'] 21484 5988 ERLKEAYSV True PC9_epitope_Rep2 1093.57677350889 1093.57566993586 28.419 2 0.0829913495951287 0.0030679203476976394 0.01385406332002957 ['ENSG00000174231|ENST00000304992|PRPF8'] 8007 16906 ATDLAYYLV True H1975_Epitope_Rep1 1027.52261267771 1027.52207496793 70.441 1 0.08298879459434948 0.0030679203476976394 0.013854844245809938 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 127659 10115 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 43.892 1 0.08298549484122122 0.0030679203476976394 0.013855852863351843 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 87743 7038 QRAQMTAAL True PC9_epitope_Rep4 988.5123994305198 988.51130993586 34.324 2 0.08298348680928812 0.0030679203476976394 0.01385646668127579 ['ENSG00000114315|ENST00000232424|HES1'] 1120 7546 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43270993586 33.977 2 0.08297365541054377 0.0030679203476976394 0.013859472325243613 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 1136 6370 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 29.429 2 0.08297179345871747 0.0030679203476976394 0.013860041627990104 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 62509 21730 LLIPIHLEV True PC9_epitope_Rep1 1045.65356727761 1045.6524699358602 88.415 2 0.08295953973738573 0.0030679203476976394 0.013863788823493511 ['ENSG00000161956|ENST00000321337|SENP3', 'ENSG00000119231|ENST00000323460|SENP5'] 117097 23392 TVISLLTGL True PC9_epitope_Rep3 915.56408356687 915.56298993586 95.259 2 0.08295550033900037 0.0030679203476976394 0.013865024282524601 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 105056 5803 SRDPTQAIA True PC9_epitope_Rep5 957.4879585044898 957.48686993586 27.314 2 0.0829529946676083 0.0030679203476976394 0.013865790699691226 ['ENSG00000103479|ENST00000262133|RBL2', 'nc|ENSG00000103479|Q08999-2|RBL2'] 115152 14011 TRDGNVFLV True PC9_epitope_Rep6 1019.5399940773499 1019.53888993586 65.747 2 0.08295138890881915 0.0030679203476976394 0.013866281878832556 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 111359 13887 THQTIVVQL True PC9_epitope_Rep2 1037.58694426977 1037.58584993586 58.697 2 0.08294737124659356 0.0030679203476976394 0.013867510897079795 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 27432 24458 FLYPFPLAL True PC9_epitope_Rep1 1079.60555445603 1079.60497496793 98.92 1 0.08294525382362891 0.0030679203476976394 0.013868158666036369 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 26251 16325 FHEGDVITL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 70.757 2 0.08294290156589873 0.0030679203476976394 0.013868878309735055 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 8904 14578 AVFPSIVGR True PC9_epitope_Rep6 944.5443511817999 944.54324993586 67.97 2 0.08292184448004634 0.0030899194920058965 0.013875322023129627 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 24678 19945 FALPGLLHA True PC9_epitope_Rep4 937.5385375253701 937.53744993586 84.853 2 0.08291912986587155 0.0030899194920058965 0.013876152931255846 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 118900 8499 VADKIQLINN True H1975_Epitope_Rep3 1126.63462273818 1126.63352993586 37.676 2 0.08290234183885446 0.0030899194920058965 0.013881292566464561 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 108823 12353 SYVNHLYVI True NCI_RA007_Epitope_Rep4 1106.5760452329 1106.57494993586 54.512 2 0.08289381202053975 0.0030899194920058965 0.01388390464550749 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5', 'nc|ENSG00000136237|Q92565-2|RAPGEF5'] 38015 17439 HAMTEFLEV True PC9_epitope_Rep6 1075.50083168731 1075.4997299358602 79.694 2 0.08288971786749834 0.0030899194920058965 0.013885158558486035 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 114755 6289 TQKSLSLSPG True NCI_RA007_Epitope_Rep1 1016.5502244078799 1016.54912993586 28.492 2 0.08287863748034148 0.0030899194920058965 0.013888552673266082 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 49024 11768 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 51.923 2 0.08287708752649946 0.0030899194920058965 0.013889027513129941 ['ENSG00000197747|ENST00000368811|S100A10'] 84827 7106 QEAGSPPVV True H1975_Epitope_Rep3 882.4446967101799 882.44414496793 32.303 1 0.08286471791312632 0.0030899194920058965 0.013892817582420376 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 120111 5085 VEAAAELSAK True H1975_Epitope_Rep1 987.5236753068699 987.52256993586 24.631 2 0.08286263856329298 0.0030899194920058965 0.01389345479388685 ['ENSG00000159335|ENST00000309083|PTMS'] 4169 12793 AHTPVIISV True PC9_epitope_Rep6 935.54401682863 935.54290993586 60.705 2 0.08286226510072996 0.0030899194920058965 0.01389356924344682 ['ENSG00000182993|ENST00000330828|C12orf60'] 104828 15384 SRAGLQFPV True PC9_epitope_Rep2 973.53451477409 973.53340993586 64.456 2 0.08284996746987044 0.0030899194920058965 0.01389733841153775 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 45060 12868 IPHSLPGAVAA True PC9_epitope_Rep1 1031.5763795860698 1031.5752899358602 54.371 2 0.08284786354547803 0.0030899194920058965 0.013897983351016616 ['ENSG00000160113|ENST00000291442|NR2F6'] 30980 18597 GASENIVIQV True PC9_epitope_Rep2 1028.5502244078798 1028.5496749679298 76.885 1 0.08284575557066018 0.0030899194920058965 0.013898629560307624 ['ENSG00000106804|ENST00000223642|C5'] 44636 16198 ILSEVQQAV True PC9_epitope_Rep1 985.54441075145 985.54330993586 67.122 2 0.08284182587440057 0.0030899194920058965 0.01389983430194768 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 97360 7480 SEDISHITP True H1975_Epitope_Rep2 997.47163973401 997.47054993586 33.719 2 0.08284006325481587 0.0030899194920058965 0.013900374706667908 ['ENSG00000138175|ENST00000260746|ARL3'] 27424 22129 FLYPFPLAL True H1975_Epitope_Rep1 1079.60555445603 1079.60497496793 92.076 1 0.08282552924809843 0.0030899194920058965 0.013904831466215972 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 96845 5515 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 26.604 2 0.08282429631669469 0.0030899194920058965 0.013905209598431521 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 54452 22008 KYGDIIFDF True PC9_epitope_Rep1 1116.54916177872 1116.5480699358602 89.477 2 0.08282076188665775 0.0030899194920058965 0.013906293639154965 ['ENSG00000164961|ENST00000318410|WASHC5', 'ENST00000523397.1_1_8:126095350-126096053:-|nuORF'] 117840 20045 TVYEGFISA True PC9_epitope_Rep3 985.4756624852898 985.47456993586 82.352 2 0.0828200535432176 0.0030899194920058965 0.013906510903853758 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 9885 15894 AYLKAIVLF True NCI_RA007_Epitope_Rep4 1036.6321035570397 1036.6310099358602 69.008 2 0.0828178571514126 0.0030899194920058965 0.013907184606372849 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 36653 21889 GVIGGGVFQAI True PC9_epitope_Rep1 1016.5654805491998 1016.56438993586 89.01 2 0.08281534927763193 0.0030899194920058965 0.01390795388769972 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 25663 7962 FEQEMATAA True NCI_RA007_Epitope_Rep2 996.4222470134398 996.4216949679301 35.602 1 0.08281035416048725 0.0030899194920058965 0.013909486241114998 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 132914 19426 VVMEELLKV True PC9_epitope_Rep4 1058.6045684798598 1058.6034699358602 82.835 2 0.08279772866490342 0.0030899194920058965 0.013913360074622213 ['nc|ENSG00000273749|Q7L576-2|CYFIP1', 'nc|ENSG00000273749|Q7L576-3|CYFIP1', 'ENSG00000273749|ENST00000617928|CYFIP1'] 48368 17158 IYTFPHSAF True PC9_epitope_Rep6 1081.5232813840498 1081.52218993586 78.583 2 0.08279357443217841 0.0030899194920058965 0.013914634923799693 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 75839 19139 NLPIFLPRV True PC9_epitope_Rep6 1067.64915060351 1067.6480499358602 86.269 2 0.0827935118579634 0.0030899194920058965 0.013914654127386855 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 27356 17311 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55805496793 72.24 1 0.08278097903844742 0.0030899194920058965 0.013918500863423494 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 3992 13195 AHDVDPIEL True PC9_epitope_Rep6 1007.4923751785899 1007.49126993586 62.399 2 0.08277542343937223 0.0030899194920058965 0.01392020637962303 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 53252 6430 KQFQSPSTL True NCI_RA007_Epitope_Rep5 1034.5396597241797 1034.53856993586 31.401 2 0.08277415358584655 0.0030899194920058965 0.013920596240160918 ['ENSG00000177311|ENST00000321464|ZBTB38'] 77027 15510 NRILGDPEAL True PC9_epitope_Rep1 1096.58767254576 1096.58656993586 64.482 2 0.0827728882800647 0.0030899194920058965 0.01392098471468446 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000509749.1_1_5:135385157-135385316:+|nuORF', 'ENST00000515433.1_1_5:135385061-135390565:+|nuORF'] 35894 4032 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 21.932 2 0.0827577652370084 0.0030899194920058965 0.013925628583514128 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 99209 12808 SHLQQPLMV True PC9_epitope_Rep2 1051.54845058607 1051.5473499358602 54.567 2 0.08275702698478037 0.0030899194920058965 0.013925855317619936 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 26802 19584 FLADPSAFVAA True PC9_epitope_Rep6 1107.5600608155898 1107.5589699358602 87.994 2 0.08275608614737313 0.0030899194920058965 0.013926144275281325 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 50052 8708 KKFENEIIL True NCI_RA007_Epitope_Rep5 1132.6492101731599 1132.64755490379 40.163 3 0.08275600630164882 0.0030899194920058965 0.013926168798410882 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 139150 14754 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 61.911 2 0.08275217327521898 0.0030899194920058965 0.013927346088907852 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 91374 15994 RHDDYLVML True PC9_epitope_Rep6 1160.5648289262 1160.56318490379 73.831 3 0.08274697597632812 0.0030899194920058965 0.01392894255658005 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 35211 11133 GRAPGGLSL True PC9_epitope_Rep1 826.4661008611 826.4650099358599 47.708 2 0.08274208378952688 0.0030899194920058965 0.013930445459195742 ['ENSG00000171223|ENST00000302754|JUNB'] 126708 16641 VLPGHFNTF True PC9_epitope_Rep1 1030.5236157372199 1030.5225099358602 68.838 2 0.082740590716154 0.0030899194920058965 0.013930904168631552 ['ENSG00000176055|ENST00000316610|MBLAC2'] 96523 11148 SADPNVVDL True H1975_Epitope_Rep3 928.45017601344 928.44962496793 47.976 1 0.08273677103817985 0.0030899194920058965 0.013932077733676418 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 107100 12199 SVHKGFAFV True PC9_epitope_Rep5 990.5287011176598 990.52760993586 51.909 2 0.08273518606842445 0.0030899194920058965 0.013932564730018273 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 7352 7459 ARPSSTITY True PC9_epitope_Rep5 994.5083595959 994.50726993586 33.645 2 0.08273428282910265 0.0030899194920058965 0.013932842265647788 ['ENSG00000159596|ENST00000372025|TMEM69'] 45604 21409 IQYIPTELDQV True PC9_epitope_Rep1 1317.68163250025 1317.68052993586 87.186 2 0.08273143486609814 0.0030899194920058965 0.013933717384664715 ['ENSG00000149100|ENST00000531120|EIF3M'] 48123 16696 IYPDSFTVL True NCI_RA007_Epitope_Rep4 1053.53826274185 1053.5371699358602 72.402 2 0.08272814904234772 0.0030899194920058965 0.013934727113190461 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 76908 14536 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 60.911 2 0.08272621688444227 0.0030899194920058965 0.013935320894389135 ['ENSG00000013523|ENST00000251089|ANGEL1'] 71714 9389 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42717496793 41.026 1 0.08271707063959594 0.0030899194920058965 0.01393813199550603 ['ENSG00000026025|ENST00000544301|VIM'] 44076 21777 IILPEDIEL True PC9_epitope_Rep4 1053.59577761797 1053.59468993586 91.959 2 0.0827143489476502 0.0030899194920058965 0.013938968611146808 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 38898 9579 HHFEGAQIL True PC9_epitope_Rep6 1050.5246783663797 1050.5235899358602 47.147 2 0.0827081541251367 0.0030899194920058965 0.01394087300150902 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 6067 7705 APLLQPRAA True PC9_epitope_Rep4 935.5552502186699 935.55414993586 37.024 2 0.08270619318976692 0.0030899194920058965 0.013941475876211518 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 105170 16281 SRFPYYNSL True PC9_epitope_Rep4 1145.55055876105 1145.54946993586 70.582 2 0.08269762019805492 0.0030899194920058965 0.013944111864960208 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 141687 11304 YTTDRVMTV True PC9_epitope_Rep5 1084.5222954078802 1084.52118993586 48.473 2 0.08267027156027314 0.0030899194920058965 0.013952524041424323 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 1663 8992 AEFVEVTK True PC9_epitope_Rep5 921.4807478657299 921.47964993586 39.533 2 0.08266978080215415 0.0030899194920058965 0.013952675037388187 ['CON__P02769'] 78553 15399 NYQGHFHLF True PC9_epitope_Rep2 1161.5355774032498 1161.53392490379 64.513 3 0.08266465921198116 0.0030899194920058965 0.013954250934660248 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 70795 21028 LYAPTILLW True NCI_RA007_Epitope_Rep5 1088.6270181766 1088.62592993586 87.894 2 0.0826606731099028 0.0030899194920058965 0.013955477561452736 ['ENSG00000081051|ENST00000395792|AFP', 'AFP|p.P171H|1|0.29|ENSG00000081051|chr4:73442325-73442325|C/A|missense_variant', 'AFP|p.A182G|1|0.38|ENSG00000081051|chr4:73442358-73442358|C/G|missense_variant'] 7380 5941 ARSTDQTVL True PC9_epitope_Rep1 989.51417325233 989.51306993586 27.666 2 0.08265944291407307 0.0030899194920058965 0.013955856144998181 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 1115 4945 AEAPASPAP True H1975_Epitope_Rep3 809.3919328613299 809.39082993586 24.149 2 0.08265913602573617 0.0030899194920058965 0.013955950589086392 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 75549 19722 NLAEKLIGV True PC9_epitope_Rep3 955.5702315764698 955.56912993586 81.088 2 0.08265774983428048 0.0030899194920058965 0.013956377193382366 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 68152 20980 LTDQTLIYL True PC9_epitope_Rep4 1078.5910265906998 1078.58992993586 88.861 2 0.08265129614000237 0.0030899194920058965 0.013958363497050654 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 1862 12217 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 52.075 1 0.0826402051611861 0.0030899194920058965 0.013961777673910663 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 6350 2606 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 14.687 2 0.08263441682569146 0.0030899194920058965 0.013963559829930946 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 4768 17116 ALDSTNVEL True PC9_epitope_Rep1 960.47639076128 960.47528993586 70.661 2 0.0826311804076443 0.0030899194920058965 0.013964556375621379 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 87569 10150 QQLGKVVQV True PC9_epitope_Rep5 997.5920296502098 997.59092993586 44.029 2 0.08262956005337871 0.0030899194920058965 0.013965055334107319 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 138774 17988 YITERIIAV True PC9_epitope_Rep5 1076.62299542532 1076.62188993586 74.207 2 0.08262785323414022 0.0030899194920058965 0.013965580936004604 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 64341 20867 LPLFLGRLP True PC9_epitope_Rep1 1024.64333694708 1024.64222993586 85.09 2 0.08262584535441138 0.0030899194920058965 0.013966199270948857 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 26345 13770 FHSDPQHWL True PC9_epitope_Rep2 1165.53049202281 1165.52884490379 58.252 3 0.08261305776589221 0.0030899194920058965 0.013970137865417226 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 103896 15125 SQADVIPAV True PC9_epitope_Rep6 898.4759968384599 898.47488993586 70.241 2 0.08261303359060922 0.0030899194920058965 0.01397014531242449 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 2658 7767 AESLQPVAA True H1975_Epitope_Rep3 884.4603467743199 884.4597949679301 34.861 1 0.08260572835923376 0.0030899194920058965 0.013972395802679352 ['ENSG00000038219|ENST00000040738|BOD1L1'] 78066 22954 NVVEALIAL True PC9_epitope_Rep2 940.5593325395998 940.55822993586 93.786 2 0.08259564929782458 0.0030899194920058965 0.013975501373267063 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 90180 2886 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 15.253 2 0.08258433419867994 0.0030899194920058965 0.013978988565224115 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 71283 13157 LYQDGVFKF True NCI_RA007_Epitope_Rep3 1115.56514619603 1115.56404993586 59.026 2 0.08258165620392417 0.0030899194920058965 0.013979814013978038 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 106776 10346 SVADTVARV True PC9_epitope_Rep1 916.4977949121999 916.49668993586 44.677 2 0.0825684399365268 0.0030899194920058965 0.013983888385817754 ['ENSG00000145632|ENST00000274289|PLK2'] 84859 10668 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.4703649679301 46.107 1 0.08256800002717996 0.0030899194920058965 0.01398402402226963 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 114833 8372 TQLQTTQSV True PC9_epitope_Rep5 1004.5138388991599 1004.51274993586 37.145 2 0.0825572630927315 0.0030899194920058965 0.013987334904819767 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 96081 12651 RYLTVATVF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 57.006 2 0.08254316955142327 0.0030899194920058965 0.013991681960679254 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 121818 15562 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 67.78 2 0.08252649027873044 0.0030899194920058965 0.013996828206397471 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 6121 14498 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 61.035 2 0.08250637679031045 0.0031164121596736266 0.014003036413316577 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 1079 8389 AEAILGQNAA True H1975_Epitope_Rep2 956.4927095317599 956.49160993586 37.221 2 0.08249584836947042 0.0031164121596736266 0.014006287134633576 ['ENSG00000132383|ENST00000254719|RPA1'] 2224 11467 AEMSTPLSV True H1975_Epitope_Rep1 933.44773348529 933.44662993586 49.09 2 0.08249498262455351 0.0031164121596736266 0.014006554470767315 ['ENSG00000137275|ENST00000259808|RIPK1'] 34840 18972 GQISEVVVV True PC9_epitope_Rep3 928.5229470308799 928.52184993586 78.199 2 0.08248940583582627 0.0031164121596736266 0.014008276659961155 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 40704 8131 HRSDALQL True PC9_epitope_Rep5 938.4933782380999 938.49228993586 36.215 2 0.08248733093750307 0.0031164121596736266 0.014008917467890174 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 1950 6333 AEINGTMNA True H1975_Epitope_Rep2 919.4069313024701 919.4063849679301 29.292 1 0.08247984812055875 0.0031164121596736266 0.014011228676430846 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 89251 16545 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48561496793 76.08 1 0.08247570979868966 0.0031164121596736266 0.014012507028582323 ['ENSG00000167658|ENST00000309311|EEF2'] 134876 15223 VYVQHPITF True PC9_epitope_Rep2 1102.5811306133398 1102.58002993586 63.821 2 0.08246666350454523 0.0031164121596736266 0.014015301863753769 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 115062 6641 TRDEDHIAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 30.953 2 0.08246455906236048 0.0031164121596736266 0.014015952102142905 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 108041 23123 SYADQMFLL True PC9_epitope_Rep1 1086.50558271458 1086.5050749679299 93.737 1 0.0824639365182746 0.0031164121596736266 0.014016144463562795 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 86696 9169 QLIVGVNK True PC9_epitope_Rep5 869.53345214493 869.53234993586 40.215 2 0.08245684260564413 0.0031164121596736266 0.014018336604014352 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 58088 10216 LEIVNPQAA True H1975_Epitope_Rep1 953.51819600361 953.51708993586 44.237 2 0.08244649053430826 0.0031164121596736266 0.014021536148840755 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 95272 14332 RVPKTLVLV True PC9_epitope_Rep1 1023.6804507317898 1023.6793499358599 59.952 2 0.08244124395493016 0.0031164121596736266 0.014023157986158132 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 21304 9151 EREKWIHAL True PC9_epitope_Rep4 1180.63529144452 1180.6336349037902 42.79 3 0.08243547242868339 0.0031164121596736266 0.01402494229993823 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 15410 19625 EAITHLLGV True PC9_epitope_Rep5 951.5389314481898 951.53782993586 80.54 2 0.08243181791679598 0.0031164121596736266 0.014026072231895228 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 21271 9071 ERDSQTQAIL True PC9_epitope_Rep5 1159.5833154413099 1159.5822099358602 39.836 2 0.08243001770941183 0.0031164121596736266 0.014026628866194237 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 47745 10140 IYEGYALPH True NCI_RA007_Epitope_Rep2 1061.5181960036098 1061.5170899358602 44.032 2 0.08242791777000155 0.0031164121596736266 0.014027278205533764 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ACTBL2|p.A175D|1|0.35|ENSG00000169067|chr5:57482184-57482184|G/T|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 128309 6089 VPPPPPIAR True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 30.102 2 0.08242755342131382 0.0031164121596736266 0.014027390871626718 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 114994 8857 TRADTTTIL True PC9_epitope_Rep2 990.53457434374 990.53346993586 39.42 2 0.0824274649064815 0.0031164121596736266 0.014027418242843889 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 58092 10375 LEIVNPQAA True H1975_Epitope_Rep3 953.51819600361 953.5176449679301 44.963 1 0.08242635800800996 0.0031164121596736266 0.014027760530485423 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 40322 13370 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5445349679301 56.288 1 0.08242522924268057 0.0031164121596736266 0.014028109588118098 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 41444 15494 HYILHNSFF True PC9_epitope_Rep6 1176.5716285587998 1176.5705299358601 71.776 2 0.08241576804897743 0.003141094572414964 0.014031035673533953 ['ENSG00000163659|ENST00000295924|TIPARP'] 44195 22954 IIYPGAFVDL True PC9_epitope_Rep3 1106.60119735158 1106.60010993586 93.557 2 0.08241482065600488 0.003141094572414964 0.014031328707521887 ['ENSG00000012174|ENST00000379484|MBTPS2'] 95280 11019 RVPKTLVLV True PC9_epitope_Rep6 1023.6804507317898 1023.6793499358599 53.284 2 0.08240997585905992 0.003141094572414964 0.014032827320342549 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 117073 5696 TVINQTQKENL True NCI_RA007_Epitope_Rep3 1286.6830294825797 1286.6819299358601 29.383 2 0.08240586119107139 0.003141094572414964 0.014034100204616817 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 73446 12030 M[Oxidation]VAPAVASV True PC9_epitope_Rep2 859.4473399429099 859.44624993586 51.59 2 0.08240114525056431 0.003141094572414964 0.014035559227558357 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 64633 14193 LPTKDLLSA True PC9_epitope_Rep1 956.5542471591599 956.55314993586 59.416 2 0.08239332016172204 0.003141094572414964 0.014037980476433278 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3', 'C2CD3|p.I477Nfs*12|1|0.16|ENSG00000168014|chr11:74118318-74118319|-/T|frameshift_variant', 'ENST00000415191.6_1_11:73824618-73881837:-|nuORF'] 14681 13786 DVIEEYFK True NCI_RA007_Epitope_Rep1 1041.50187723313 1041.5007899358602 57.642 2 0.0823830070030638 0.003141094572414964 0.014041172185922216 ['ENSG00000112306|ENST00000230050|RPS12'] 135069 16324 WEALVSPVV True H1975_Epitope_Rep2 998.54368247546 998.5431349679301 68.008 1 0.08237868393668966 0.003141094572414964 0.014042510288237954 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 35797 13295 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 62.793 2 0.08237640850231984 0.003141094572414964 0.014043214642878842 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 111813 22811 TILPAIILV True PC9_epitope_Rep4 951.63685458431 951.63574993586 95.964 2 0.08237602207427093 0.003141094572414964 0.014043334263945042 ['ENSG00000198712|ENST00000361739|MT-CO2'] 119862 7404 VDFNVPM[Oxidation]K True H1975_Epitope_Rep1 964.4688036634799 964.46770993586 33.483 2 0.08236712145634036 0.003141094572414964 0.014046089767107311 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 115203 6223 TRDSKPIAL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 28.916 2 0.08236136954107262 0.003141094572414964 0.014047870747214787 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'CDK12|p.L551Ffs*24|1|0.28|ENSG00000167258|chr17:39471481-39471482|-/T|frameshift_variant'] 116411 6954 TTISKVSQV True PC9_epitope_Rep3 961.5444107514498 961.54330993586 31.761 2 0.08235738233362734 0.003141094572414964 0.014049105440760556 ['ENSG00000065183|ENST00000349139|WDR3'] 8931 13661 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6965849037902 57.57 3 0.0823534894728478 0.003141094572414964 0.01405031101684234 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 32174 6341 GEVPESPEA True H1975_Epitope_Rep3 913.4028914678499 913.40234496793 29.38 1 0.08234705708512953 0.003141094572414964 0.014052303269225635 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 104752 13980 SQVPEVTTV True PC9_epitope_Rep5 958.49712620586 958.49602993586 58.793 2 0.08234675933059712 0.003141094572414964 0.014052395496794158 ['ENSG00000196455|ENST00000356763|PIK3R4'] 105083 9757 SRDTTMYAV True PC9_epitope_Rep1 1042.47534521546 1042.4742499358601 42.389 2 0.08234496412565914 0.003141094572414964 0.014052951562120697 ['ENSG00000165688|ENST00000371717|PMPCA'] 132696 14210 VVHDGFEGL True PC9_epitope_Rep1 971.47124581119 971.47014993586 59.481 2 0.08234249224852186 0.003141094572414964 0.014053717260685574 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 34844 18887 GQISEVVVV True PC9_epitope_Rep5 928.5229470308799 928.52184993586 77.668 2 0.08233184857863954 0.003141094572414964 0.014057014733882402 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 31088 22410 GAVDPLLAL True PC9_epitope_Rep1 867.50656869075 867.50546993586 91.019 2 0.08232873660467609 0.003141094572414964 0.014057978979406026 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 17271 15100 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 63.339 2 0.08232615864673189 0.003141094572414964 0.014058777807016726 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 76800 2620 NRAPNTAEL True PC9_epitope_Rep2 984.4988575413599 984.49776993586 14.733 2 0.08232077969705136 0.003141094572414964 0.014060444710553044 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 24778 12886 FASTILHL True H1975_Epitope_Rep2 900.5069030439199 900.50580993586 54.679 2 0.08232040382485238 0.003141094572414964 0.014060561197977923 ['ENSG00000129562|ENST00000250498|DAD1'] 100513 23031 SLASLLVSV True PC9_epitope_Rep1 887.5327834385901 887.5322349679301 93.388 1 0.08232013933668204 0.003141094572414964 0.01406064316666316 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 7051 9919 AQQPTAVQV True PC9_epitope_Rep1 940.4977949121998 940.49668993586 43.013 2 0.08231662254587942 0.003141094572414964 0.014061733113309074 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 115819 8593 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 38.007 1 0.08231554298789398 0.003141094572414964 0.014062067712839764 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 53465 16661 KRGDVIYIL True PC9_epitope_Rep5 1075.6389798426299 1075.6378899358601 69.091 2 0.08230597977572994 0.003141094572414964 0.014065032072924687 ['ENSG00000005020|ENST00000345317|SKAP2'] 64097 20265 LPDIFEAQIA True PC9_epitope_Rep6 1115.58627556343 1115.5851699358602 90.64 2 0.08230074192224204 0.003141094572414964 0.01406665592701569 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 41283 8455 HVQNMIKGV True PC9_epitope_Rep1 1024.5487849392398 1024.54768993586 37.358 2 0.08229646568685912 0.003141094572414964 0.014067981788028797 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 18858 15353 ELDPTNMTYI True H1975_Epitope_Rep2 1195.54309042211 1195.54198993586 64.213 2 0.08229327769291434 0.003141094572414964 0.014068970312481614 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 98116 8972 SESFVSPEA True H1975_Epitope_Rep2 951.41854153199 951.41744993586 39.465 2 0.0822918916151094 0.003141094572414964 0.014069400124035777 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 59319 15452 LFIATSQKF True PC9_epitope_Rep4 1053.58588164061 1053.58478993586 67.367 2 0.08228890348899746 0.003141094572414964 0.014070326759781052 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 108048 23059 SYADQMFLL True PC9_epitope_Rep5 1086.50558271458 1086.5050749679299 93.684 1 0.08228848025697913 0.003141094572414964 0.014070458011187694 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 49016 11587 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 51.517 2 0.08228139889669722 0.003141094572414964 0.01407265423124726 ['ENSG00000197747|ENST00000368811|S100A10'] 41418 9215 HYGQSGISM True PC9_epitope_Rep1 978.4229157197799 978.42180993586 40.297 2 0.08228074658662247 0.003141094572414964 0.014072856555520732 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 124743 11322 VHAQIVSTL True PC9_epitope_Rep2 966.5498304850599 966.54872993586 48.872 2 0.08228064560673559 0.003141094572414964 0.014072887876271742 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 107917 20687 SVVSQFITV True PC9_epitope_Rep4 978.5385970950199 978.53750993586 87.733 2 0.08227974695932475 0.003141094572414964 0.014073166611014834 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'DAAM1|p.S926C|1|0.5|ENSG00000100592|chr14:59363703-59363703|C/G|missense_variant'] 95819 15816 RYIPTAAAF True PC9_epitope_Rep1 1008.5392658013599 1008.53816993586 65.648 2 0.08227489819930274 0.003141094572414964 0.014074670647203167 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 88622 12422 QTEDNM[Oxidation]LFY True H1975_Epitope_Rep2 1175.4804905459898 1175.4793899358601 52.867 2 0.08227467452126846 0.003141094572414964 0.0140747400335014 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 134827 22314 VYVDDIYVI True PC9_epitope_Rep1 1097.56447748969 1097.5639749679299 90.643 1 0.0822614244001958 0.003141094572414964 0.014078850875199654 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 35048 8689 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 38.785 2 0.08224818277435869 0.003141094572414964 0.014082960207070915 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 35792 15394 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 64.221 2 0.08224498520157898 0.0031636630698830574 0.014083952692598569 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 121934 10531 VFSGLVSTGLK True NCI_RA007_Epitope_Rep3 1106.63356010902 1106.6324699358602 48.479 2 0.0822199287671495 0.0031636630698830574 0.014091732161088543 ['ENSG00000167658|ENST00000309311|EEF2'] 4121 12761 AHSNLASVL True PC9_epitope_Rep5 910.4872302285 910.48612993586 54.092 2 0.08221732117855507 0.0031636630698830574 0.01409254199130531 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 23839 23454 EYINFLENL True PC9_epitope_Rep1 1153.5655401188499 1153.56444993586 95.0 2 0.08221596873073869 0.0031636630698830574 0.01409296203377927 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 47117 16266 ITVEKIIKI True PC9_epitope_Rep1 1055.69543208959 1055.6943299358602 67.386 2 0.08221258724435052 0.0031636630698830574 0.014094012305316947 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 137592 7246 YEERVQAVV True H1975_Epitope_Rep1 1091.56112344475 1091.56002993586 32.881 2 0.08219016988630383 0.0031636630698830574 0.014100976874471698 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 118423 14711 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47054993586 61.585 2 0.08218834312377798 0.0031636630698830574 0.014101544550822223 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 54902 9035 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 40.101 3 0.08218196604881935 0.0031636630698830574 0.014103526429540759 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 25476 7933 FEEQVNNIKP True H1975_Epitope_Rep2 1216.6088019131598 1216.6077099358602 35.46 2 0.08217821624269012 0.0031636630698830574 0.014104691923017184 ['nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1019Efs*12|1|0.21|ENSG00000139734|chr13:59810896-59810896|T/-|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3'] 76778 18540 NRAATLMML True PC9_epitope_Rep3 1019.5256069665099 1019.52450993586 76.534 2 0.08217749335377446 0.0031636630698830574 0.014104916617642758 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 24683 18714 FALPGLLHA True PC9_epitope_Rep6 937.5385375253701 937.53744993586 84.626 2 0.08217669601848906 0.0031636630698830574 0.01410516445623316 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 76047 11006 NMDNM[Oxidation]FESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 47.363 2 0.08217507481411009 0.0031636630698830574 0.014105668393616053 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 107820 16372 SVVAAVQGL True PC9_epitope_Rep6 842.48616759934 842.48506993586 75.361 2 0.08217224447267539 0.0031636630698830574 0.014106548221312262 ['ENSG00000110092|ENST00000227507|CCND1'] 35082 10235 GQVLLRAQL True NCI_RA007_Epitope_Rep4 996.6080140675199 996.60690993586 46.225 2 0.08216355679251999 0.0031636630698830574 0.014109249157665638 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 90399 4915 REIEATNAV True H1975_Epitope_Rep2 1001.5141732523299 1001.51306993586 23.988 2 0.0821570761662025 0.0031636630698830574 0.014111264253127857 ['ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'ENST00000477523.1_1_2:110602660-110613470:+|nuORF'] 23862 23791 EYIQFVPLL True PC9_epitope_Rep1 1120.6168474157198 1120.61627496793 96.31 1 0.08214945207348087 0.0031636630698830574 0.014113635245492293 ['ENSG00000179409|ENST00000319004|GEMIN4'] 97448 13524 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.4074249679301 57.156 1 0.08214866941390196 0.0031636630698830574 0.014113878663465891 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 96467 8436 SAAM[Oxidation]PGASL True PC9_epitope_Rep5 819.37965430591 819.37854993586 37.392 2 0.08214836126051611 0.0031636630698830574 0.01411397450451968 ['ENSG00000086062|ENST00000379731|B4GALT1'] 73206 17812 M[Oxidation]RYVASYLL True PC9_epitope_Rep2 1130.5794167416198 1130.57830993586 73.806 2 0.08213497048207544 0.0031636630698830574 0.014118139859116545 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 108652 13367 SYPSAFSKL True PC9_epitope_Rep6 998.50729696674 998.50618993586 63.079 2 0.08213474120547626 0.0031636630698830574 0.01411821118826611 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 14050 9597 DRM[Oxidation]VGQVL True PC9_epitope_Rep5 932.4749516730798 932.47384993586 41.877 2 0.08213266805383797 0.0031636630698830574 0.014118856171942288 ['ENSG00000130741|ENST00000253039|EIF2S3'] 24068 19823 EYNSDLHQFF True PC9_epitope_Rep3 1298.5567663402996 1298.5556699358601 81.482 2 0.0821285912634145 0.0031636630698830574 0.014120124593622677 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 106249 14956 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.55917496793 62.769 1 0.08212483609529056 0.0031636630698830574 0.014121293042794811 ['ENSG00000131459|ENST00000253778|GFPT2'] 98104 13842 SESDYIVMP True H1975_Epitope_Rep1 1039.4532127885498 1039.4526749679299 58.389 1 0.08210224873510137 0.0031636630698830574 0.01412832318658503 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|4|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1', 'NCOR2-SCARB1|11|fusion', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'SCARB1|p.G379*|1|0.3|ENSG00000073060|chr12:124795254-124795263|GGGGATTCCC/-|frameshift_variant'] 88022 14061 QRPPTIVL True PC9_epitope_Rep3 922.5600012459399 922.55890993586 59.175 2 0.0821018300775275 0.0031636630698830574 0.014128453521562676 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 78326 20001 NYISGIQTI True PC9_epitope_Rep1 1007.52876068731 1007.52817496793 81.761 1 0.08210041545285612 0.0031636630698830574 0.014128893925800362 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 79259 8263 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 37.144 2 0.0820966857079749 0.0031636630698830574 0.014130055140398372 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 1165 6926 AEAPPSVAP True H1975_Epitope_Rep2 837.4232329896099 837.42212993586 31.562 2 0.08209347223936929 0.0031636630698830574 0.014131055689940256 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 28375 10292 FRVPTANVS True PC9_epitope_Rep6 989.5294293936499 989.52832993586 50.276 2 0.08208643662376168 0.0031636630698830574 0.014133246540016903 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 72887 11190 MPSSVPLRA True PC9_epitope_Rep1 956.5113368013599 956.51022993586 47.924 2 0.08208335350621122 0.0031636630698830574 0.01413420670546108 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 127672 9846 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 43.207 2 0.08208330947762874 0.0031636630698830574 0.014134220417585112 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 97835 12054 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 51.447 1 0.08208159928220819 0.0031636630698830574 0.014134753045157647 ['ENSG00000126247|ENST00000246533|CAPNS1'] 86109 14340 QHVPGSPFSV True PC9_epitope_Rep2 1053.52434401321 1053.5232499358601 60.422 2 0.08207657265715985 0.0031636630698830574 0.014136318658972283 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 68976 12010 LTPKLFHEV True PC9_epitope_Rep2 1082.6124307416198 1082.61132993586 51.513 2 0.08207396447505598 0.0031636630698830574 0.014137131078481394 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 106850 6445 SVASPFTSK True NCI_RA007_Epitope_Rep4 922.4759968384601 922.47488993586 31.39 2 0.08207185353593092 0.0031636630698830574 0.014137788644452955 ['ENSG00000187527|ENST00000342358|ATP13A5', 'ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4'] 8863 19326 AVFPDDM[Oxidation]PTL True PC9_epitope_Rep4 1120.51106239828 1120.50996993586 82.445 2 0.08207085060319357 0.0031636630698830574 0.014138101072065293 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 78216 22866 NYGDYFNVF True PC9_epitope_Rep1 1137.47672511445 1137.4761749679299 92.747 1 0.08206619609695509 0.0031636630698830574 0.014139551100838098 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 89604 20166 QYPVIIHLI True PC9_epitope_Rep4 1094.64881625034 1094.6477099358601 85.705 2 0.08206300389143831 0.0031636630698830574 0.014140545656460977 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 26514 19192 FIFSDTHEL True PC9_epitope_Rep2 1107.52367530687 1107.52256993586 79.194 2 0.08206167661185533 0.0031636630698830574 0.014140959199712845 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 66559 22381 LSIEQLTTL True PC9_epitope_Rep1 1016.5753765265599 1016.57426993586 90.904 2 0.08205836319888855 0.0031636630698830574 0.014141991616191093 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 105951 5952 SSSKGSLGGGF True NCI_RA007_Epitope_Rep4 982.4719740871798 982.47086993586 29.514 2 0.08205817766108718 0.0031636630698830574 0.01414204942945322 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 98057 5665 SEQPRGPIP True H1975_Epitope_Rep3 979.5086939490698 979.50758993586 26.819 2 0.0820581656383818 0.0031636630698830574 0.014142053175715338 ['ENST00000450873.6_2_7:66236975-66240294:+|nuORF'] 92880 9901 RPFQGTMGV True PC9_epitope_Rep6 991.4909357099498 991.48982993586 48.589 2 0.08205771434670121 0.0031636630698830574 0.014142193798393222 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 26229 8703 FHDPDSAVV True PC9_epitope_Rep6 985.4505103666099 985.44940993586 43.329 2 0.08204358310001544 0.0031636630698830574 0.014146597764686028 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 6874 18489 AQIDGTLSTI True PC9_epitope_Rep5 1017.5342399905701 1017.53314993586 76.141 2 0.08204157054265478 0.0031636630698830574 0.014147225077636225 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 14110 4837 DSAPSPPPP True H1975_Epitope_Rep2 863.40249754503 863.40140993586 23.695 2 0.0820360433055343 0.0031636630698830574 0.014148948048496526 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 101278 24849 SLIEDLILL True PC9_epitope_Rep1 1027.6165130625498 1027.61540993586 100.48 2 0.08203399698295574 0.0031636630698830574 0.014149585985704635 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'SMYD3|p.H408N|1|0.17|ENSG00000185420|chr1:245749628-245749628|G/T|missense_variant', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 107462 18353 SVLVSVSEV True PC9_epitope_Rep4 917.50696261357 917.50641496793 78.661 1 0.08202727000796263 0.0031636630698830574 0.014151683297685921 ['ENSG00000221926|ENST00000649191|TRIM16'] 32752 7552 GHATPVSSL True PC9_epitope_Rep5 867.4450310633501 867.44392993586 33.999 2 0.08202151892050376 0.0031636630698830574 0.01415347658227077 ['ENSG00000163811|ENST00000407426|WDR43'] 321 18767 AAIDWFDGK True PC9_epitope_Rep2 1021.4868958753299 1021.48578993586 77.558 2 0.08201887857996054 0.0031636630698830574 0.01415429995572141 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 106030 14943 SSYMHFTNV True PC9_epitope_Rep1 1084.46478053176 1084.4636899358602 62.3 2 0.08201385699666654 0.0031636630698830574 0.014155866028649274 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 97752 10168 SEIPLTLHS True H1975_Epitope_Rep2 995.5287606873101 995.52766993586 44.112 2 0.08199493651914204 0.0031636630698830574 0.014161768187407206 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 135151 11417 WELGQVHPP True H1975_Epitope_Rep3 1061.52942939365 1061.52832993586 49.032 2 0.08199280076026186 0.0031636630698830574 0.014162434572901835 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 133680 21997 VYAPPVGGFSF True PC9_epitope_Rep5 1139.56514619603 1139.56457496793 89.638 1 0.0819870326306854 0.0031636630698830574 0.014164234453945034 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 8897 16174 AVFPSIVGR True PC9_epitope_Rep2 944.5443511817999 944.54324993586 67.467 2 0.08198627233406063 0.0031636630698830574 0.014164471712107772 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115502 8689 TRQTGIVL True PC9_epitope_Rep4 886.5236157372198 886.52250993586 40.913 2 0.08198412925483789 0.0031636630698830574 0.014165140501474301 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 32014 10731 GEQLSFAA True H1975_Epitope_Rep2 821.3919328613299 821.3913849679301 46.305 1 0.08196001646149213 0.0031636630698830574 0.014172667407955803 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENST00000466110.5_1_2:74593906-74595252:-|nuORF'] 54130 17581 KVPEWVDTV True PC9_epitope_Rep1 1071.5600608155898 1071.5589699358602 72.417 2 0.08195286769055593 0.0031636630698830574 0.014174899646985355 ['ENSG00000105372|ENST00000598742|RPS19'] 76051 13322 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 56.373 2 0.08194745273551408 0.0031636630698830574 0.014176590713009555 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 8651 19960 AVAELNYGL True PC9_epitope_Rep1 948.4916469026 948.49109496793 81.6 1 0.08194639679819506 0.0031636630698830574 0.014176920499523859 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 97384 11985 SEDPTVPLP True H1975_Epitope_Rep3 953.4705771048499 953.47002496793 51.258 1 0.08193042396346116 0.0031636630698830574 0.01418190995539834 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 26911 20887 FLDGNEMTL True PC9_epitope_Rep2 1038.46919720586 1038.46808993586 85.785 2 0.08192030257040246 0.0031636630698830574 0.014185072441295606 ['ENSG00000169504|ENST00000374379|CLIC4'] 32416 11776 GFSLEELR True NCI_RA007_Epitope_Rep5 949.4868958753299 949.48578993586 51.955 2 0.08188969254631574 0.0031636630698830574 0.014194640741501572 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 26637 19473 FIPPDGNFRL True PC9_epitope_Rep2 1174.61349337078 1174.6123899358602 80.282 2 0.08188685609775881 0.0031636630698830574 0.014195527685364476 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 108097 20689 SYATLLHVL True PC9_epitope_Rep5 1015.5702315764698 1015.56912993586 84.635 2 0.08187820033984745 0.003187048736462094 0.014198234620807932 ['ENSG00000183840|ENST00000329321|GPR39'] 96158 15858 RYPDRITLI True PC9_epitope_Rep1 1145.65569253593 1145.65458993586 65.809 2 0.08186153802156812 0.003187048736462094 0.01420344683009269 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 1584 6043 AEEYGARVV True H1975_Epitope_Rep3 992.4927095317598 992.49160993586 28.258 2 0.08186008917814581 0.003187048736462094 0.014203900133670823 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 642 17644 AASTLVTWL True H1975_Epitope_Rep2 960.52803241132 960.52748496793 73.186 1 0.08185280901868072 0.003187048736462094 0.01420617810240055 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 128305 6572 VPPPPPIAR True NCI_RA007_Epitope_Rep1 942.56508662638 942.56398993586 29.577 2 0.08184521584132093 0.003187048736462094 0.014208554379890074 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 32882 8799 GHSGPITSI True PC9_epitope_Rep1 867.4450310633501 867.44392993586 38.687 2 0.08184292372625182 0.003187048736462094 0.014209271768348374 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 140272 15550 YRAPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54290993586 65.086 2 0.08184144629242299 0.003187048736462094 0.014209734195071069 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 21393 8875 ERIKGYAL True PC9_epitope_Rep5 948.5392658013599 948.53816993586 39.082 2 0.08184014997689613 0.003187048736462094 0.014210139944627768 ['ENSG00000104611|ENST00000265807|SH2D4A', 'nc|ENSG00000104611|Q9H788-2|SH2D4A'] 105775 9558 SSHFLEQTL True NCI_RA007_Epitope_Rep3 1060.5189242796 1060.5178299358602 44.683 2 0.08184002628665656 0.003187048736462094 0.014210178660507661 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 91001 13785 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54415490379 64.824 3 0.08183910772272637 0.003187048736462094 0.014210466180314385 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 62502 21584 LLIPGLATA True PC9_epitope_Rep2 867.54295419947 867.5424049679301 88.495 1 0.08183909489792138 0.003187048736462094 0.01421047019464679 ['ENSG00000125356|ENST00000371437|NDUFA1'] 127786 4990 VPDRFTGSG True NCI_RA007_Epitope_Rep4 934.4508447197799 934.44974993586 25.671 2 0.08182779780483025 0.003187048736462094 0.014214006746409468 ['CON__Q05B55'] 139928 12233 YQAEHLLQT True PC9_epitope_Rep3 1101.5454733806098 1101.54436993586 52.084 2 0.08182068099160826 0.003187048736462094 0.014216235086667599 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ADAM8|p.Q214Rfs*17|1|0.52|ENSG00000151651|chr10:133272862-133272862|T/-|frameshift_variant', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 6692 14990 AQAEVYKELRL True PC9_epitope_Rep1 1318.7245003717399 1318.72285490379 62.478 3 0.08181973542668926 0.003187048736462094 0.01421653117648114 ['ENSG00000169710|ENST00000306749|FASN'] 114375 18234 TPSIPVLTA True PC9_epitope_Rep6 897.51713337445 897.51658496793 82.778 1 0.08181790172762997 0.003187048736462094 0.01421710538898898 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 34984 22295 GQSELTLLL True PC9_epitope_Rep5 972.54916177872 972.54806993586 90.764 2 0.08181508908128896 0.003187048736462094 0.014217986195594124 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 111552 9077 TIAPALVSK True PC9_epitope_Rep2 898.5487678559 898.54766993586 40.258 2 0.08181332573730493 0.003187048736462094 0.01421853842942415 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 8666 20337 AVAGATSLVTL True PC9_epitope_Rep1 1001.57571087973 1001.5746099358599 83.057 2 0.08181157601671396 0.003187048736462094 0.014219086416648633 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 77418 17255 NSLDAKEIYL True PC9_epitope_Rep5 1164.60265390356 1164.60154993586 71.383 2 0.08181144705230625 0.003187048736462094 0.014219126807222959 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10'] 139018 16308 YLADIFTKL True H1975_Epitope_Rep3 1082.6011973515801 1082.60010993586 68.203 2 0.08180502833752294 0.003187048736462094 0.014221137231031387 ['ENSG00000236287|ENST00000413761|ZBED5'] 120247 4151 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 21.087 2 0.08180003276692782 0.003187048736462094 0.014222702092354352 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 90079 4866 REAEFTKSIA True NCI_RA007_Epitope_Rep5 1150.59823722946 1150.5971499358602 25.41 2 0.08179311360787687 0.003187048736462094 0.014224869784132831 ['ENSG00000118363|ENST00000263672|SPCS2'] 88262 7225 QSDVIHQSVY True H1975_Epitope_Rep3 1174.56185172074 1174.56074993586 32.763 2 0.08179022768153804 0.003187048736462094 0.014225774002765758 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 41505 17111 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 70.84 2 0.08179011888945982 0.003187048736462094 0.014225808090561589 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 71444 17932 LYTGTVSSF True PC9_epitope_Rep2 973.47566248529 973.47511496793 74.282 1 0.08177610061833115 0.003187048736462094 0.014230201073218493 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 31470 4919 GEAPPSAPP True H1975_Epitope_Rep2 821.3919328613299 821.39082993586 24.003 2 0.08177484017008316 0.003187048736462094 0.014230596129163605 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 27883 21258 FQDQQILTL True PC9_epitope_Rep1 1104.58152453616 1104.58097496793 86.593 1 0.08174787821223697 0.003187048736462094 0.014239049144075859 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 97578 7858 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 35.172 1 0.08174784168256807 0.003187048736462094 0.014239060599919234 ['nc|ENSG00000128951|P33316-2|DUT'] 106675 16528 STTNGGILTV True PC9_epitope_Rep1 961.50802524273 961.50692993586 68.398 2 0.0817455891684367 0.003187048736462094 0.014239767013638788 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 102240 11815 SLSGELREV True PC9_epitope_Rep4 988.5189242795999 988.51782993586 53.214 2 0.08173061264286513 0.003187048736462094 0.01424446465620828 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 129368 7063 VRDKSYLL True PC9_epitope_Rep4 992.5654805492 992.56438993586 34.434 2 0.08172989848092954 0.003187048736462094 0.01424468870158479 ['nc|ENSG00000117602|Q9UKA8-5|RCAN3', 'ENSG00000117602|ENST00000374395|RCAN3', 'nc|ENSG00000117602|Q9UKA8-6|RCAN3'] 99117 13909 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 58.337 2 0.08172548585960007 0.003187048736462094 0.01424607309315703 ['ENSG00000132646|ENST00000379143|PCNA'] 106954 7012 SVEADINGLRR True H1975_Epitope_Rep1 1228.65239806064 1228.65076490379 32.006 3 0.08172203354392499 0.003187048736462094 0.014247156291707001 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'nc|ENSG00000171401|P13646-2|KRT13', 'KRT13|p.Y356Lfs*25|1|0.09|ENSG00000171401|chr17:41502553-41502554|-/A|frameshift_variant', 'CON__P13646-1', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 21662 17856 ERSDTFINL True PC9_epitope_Rep5 1093.54038800017 1093.53928993586 73.701 2 0.08170784296789689 0.003187048736462094 0.014251609538284004 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 137587 8162 YEEQPGLQP True H1975_Epitope_Rep1 1059.4872897981497 1059.48618993586 36.336 2 0.08168650814235877 0.003187048736462094 0.014258307230388526 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 107461 19382 SVLVSVSEV True PC9_epitope_Rep3 917.50696261357 917.50641496793 79.776 1 0.08168446593021561 0.003187048736462094 0.01425894850167981 ['ENSG00000221926|ENST00000649191|TRIM16'] 140218 16418 YQVGVHYEL True PC9_epitope_Rep5 1106.5396597241802 1106.53856993586 68.152 2 0.08168225295343463 0.003187048736462094 0.01425964342500337 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 25499 11951 FEGGVVIAA True H1975_Epitope_Rep2 861.4596184983299 861.4590749679301 51.048 1 0.08167843040741778 0.003187048736462094 0.01426084386325694 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 15860 12428 EDFSETLTR True PC9_epitope_Rep3 1096.50366813828 1096.50256993586 52.831 2 0.08166721939576832 0.003187048736462094 0.014264365133388848 ['ENSG00000044574|ENST00000324460|HSPA5'] 69461 12620 LVAASQAALGL True NCI_RA007_Epitope_Rep3 1012.5916952970399 1012.59058993586 56.886 2 0.08166715466561378 0.003187048736462094 0.01426438546687103 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 26542 14827 FIHQHFVEV True PC9_epitope_Rep5 1154.5872786229402 1154.5856249037902 62.032 3 0.08165613862128167 0.003187048736462094 0.014267846298680584 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 103196 17348 SPILVATAV True PC9_epitope_Rep6 869.52221875489 869.52112993586 79.343 2 0.08165214633536647 0.003187048736462094 0.014269100721000447 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 88133 4775 QRSGNVAEL True PC9_epitope_Rep2 972.4988575413598 972.49776993586 23.735 2 0.08164270198973589 0.003187048736462094 0.014272068655256624 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 38411 2872 HENESVYKA True H1975_Epitope_Rep1 1075.4934378077498 1075.4923499358601 14.649 2 0.08163948806156818 0.003187048736462094 0.014273078780780065 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 41448 13749 HYIPRAVLL True PC9_epitope_Rep4 1080.64439957624 1080.64330993586 60.782 2 0.0816388998616542 0.003187048736462094 0.014273263657057885 ['ENSG00000037042|ENST00000251412|TUBG2', 'ENST00000589613.1_1_17:40761741-40762767:+|nuORF', 'ENST00000588056.1_1_17:40761755-40764233:+|nuORF', 'TUBG1|p.V182Wfs*14|1|0.1|ENSG00000131462|chr17:42613010-42613010|G/-|frameshift_variant', 'ENST00000588870.1_1_17:40811874-40817754:+|nuORF', 'ENSG00000131462|ENST00000251413|TUBG1', 'ENST00000418303.1_1_7:43958366-43959461:+|nuORF'] 72944 15649 MQAERIFSEV True PC9_epitope_Rep6 1208.5859582936 1208.58486993586 72.398 2 0.08163878110291116 0.003187048736462094 0.014273300984221915 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 69536 14068 LVDDNYFY True H1975_Epitope_Rep3 1047.45492704071 1047.4543749679299 59.436 1 0.08163749435620163 0.003187048736462094 0.01427370542857232 ['ENSG00000174231|ENST00000304992|PRPF8'] 1542 10540 AEEPVFAAA True H1975_Epitope_Rep3 903.4337976733099 903.43324496793 45.608 1 0.08163645650827737 0.003187048736462094 0.014274031648024517 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 89404 14593 QYAPSTAQF True PC9_epitope_Rep1 1011.4661604307499 1011.46506993586 60.955 2 0.08162797063603545 0.003187048736462094 0.014276699215033547 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 54939 20878 KYPSPFFVF True PC9_epitope_Rep4 1130.5800679841798 1130.5794749679299 88.463 1 0.08161771216500338 0.003187048736462094 0.014279924629687189 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 127686 9512 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 44.198 2 0.0816125578492498 0.003187048736462094 0.014281545480575676 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 6039 16473 APLDSIHSLAA True PC9_epitope_Rep1 1093.57677350889 1093.57566993586 68.189 2 0.0816117122360538 0.003187048736462094 0.014281811412639516 ['ENSG00000169710|ENST00000306749|FASN'] 32025 7082 GEQSVVTAP True H1975_Epitope_Rep2 886.4396113297399 886.43850993586 32.172 2 0.08160966700254935 0.003187048736462094 0.014282454625643615 ['ENSG00000100324|ENST00000216160|TAB1'] 85042 10092 QEIAVPVA True NCI_RA007_Epitope_Rep3 825.4596184983299 825.4590749679301 46.788 1 0.08160409503711434 0.003187048736462094 0.014284207111385982 ['ENST00000462391.5_1_10:103541605-103543114:-|nuORF', 'ENSG00000107833|ENST00000370110|NPM3'] 108441 15829 SYLPLAHMF True NCI_RA007_Epitope_Rep5 1077.53173789277 1077.53064993586 67.607 2 0.08159468423683769 0.0032149806819143237 0.014287167439374533 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 7184 10891 AQYEHDLEV True PC9_epitope_Rep2 1102.4931034545798 1102.49200993586 47.209 2 0.08159274076417834 0.0032149806819143237 0.014287778863583258 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 30441 15367 GAFFGPIRL True H1975_Epitope_Rep2 976.5494365622399 976.54832993586 64.268 2 0.08158756138584906 0.0032149806819143237 0.014289408436409143 ['ENSG00000167113|ENST00000300452|COQ4', 'nc|ENSG00000167113|Q9Y3A0-2|COQ4'] 96806 7688 SAQSFFENK True NCI_RA007_Epitope_Rep5 1056.48762415132 1056.48652993586 36.275 2 0.08158378127868395 0.003238159599031368 0.014290597870633515 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 45438 17799 IQIMKVEEI True PC9_epitope_Rep2 1101.61038213629 1101.60928993586 73.756 2 0.0815775823092993 0.003238159599031368 0.014292548615900904 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 114388 15741 TPSPLPTV True PC9_epitope_Rep3 810.4487194614601 810.4481749679301 65.704 1 0.08157262193517788 0.003238159599031368 0.014294109769187768 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 141799 20434 YVDDFGVSV True PC9_epitope_Rep2 999.4549270407099 999.45382993586 84.026 2 0.08156393896951394 0.003238159599031368 0.014296842899768864 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 73482 22468 M[Oxidation]VDGTLLLL True PC9_epitope_Rep2 989.5467196310099 989.54617496793 91.912 1 0.08155819748577335 0.003238159599031368 0.014298650411486886 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 55084 6579 LAAAAAAAA True PC9_epitope_Rep5 699.3915389385099 699.39099496793 30.276 1 0.08155476185613073 0.003238159599031368 0.014299732105625174 ['ENST00000374888.2_1_X:57618686-57618833:+|nuORF', 'ENST00000489266.5_1_10:123733883-123734162:-|nuORF', 'ENST00000312719.9_1_6:114663491-114664094:-|nuORF', 'ENSG00000151789|ENST00000281523|ZNF385D', 'ENSG00000198944|ENST00000378693|SOWAHA', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2', 'ENSG00000167470|ENST00000682408|MIDN', 'nc|ENSG00000167470|Q504T8|MIDN', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000071553|ENST00000369762|ATP6AP1', 'ENST00000356978.8_1_14:90863393-90866410:+|nuORF', 'ENST00000447653.7_1_14:90863393-90865345:+|nuORF', 'nc|ENSG00000235927|Q8NBZ9|NEXN-AS1', 'ENST00000380007.2_1_5:94956482-94957517:+|nuORF'] 45326 20284 IQALISGIEA True PC9_epitope_Rep2 1013.57571087973 1013.57517496793 83.444 1 0.08155258628773035 0.003238159599031368 0.014300417114249479 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 7202 13799 AQYLINVRL True NCI_RA007_Epitope_Rep2 1088.63422881536 1088.63312993586 58.324 2 0.08155207723392029 0.003238159599031368 0.014300577401517968 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 141744 20357 YTYEFDFSKV True PC9_epitope_Rep2 1297.5866694862498 1297.5855699358601 83.726 2 0.08154181379772363 0.003238159599031368 0.014303809439302591 ['ENSG00000126814|ENST00000261249|TRMT5'] 87401 8537 QPVSGTQVV True PC9_epitope_Rep4 913.48689587533 913.48578993586 40.316 2 0.08150939113851259 0.003238159599031368 0.014314024093945471 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 40409 6508 HQVPAVSSV True PC9_epitope_Rep4 922.4872302285 922.48612993586 32.154 2 0.08149721612773726 0.003238159599031368 0.01431786155846133 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 40275 19240 HQLESILAM True PC9_epitope_Rep5 1040.5324661687598 1040.53136993586 79.045 2 0.08148961617485692 0.003238159599031368 0.014320257490977848 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 34219 9965 GNLANVIR True PC9_epitope_Rep3 855.49264996211 855.49154993586 43.288 2 0.08148390127332368 0.003238159599031368 0.014322059396979454 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENST00000418448.1_1_13:57888978-57889152:+|nuORF', 'ENSG00000169100|ENST00000381401|SLC25A6'] 20535 6781 EPQYPVRSA True PC9_epitope_Rep1 1045.5192586327698 1045.5181699358602 30.888 2 0.08147832139477966 0.003238159599031368 0.014323818935446377 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 36706 11901 GVISKVSTL True PC9_epitope_Rep2 902.5436824754601 902.54258993586 51.101 2 0.08147361874506924 0.003238159599031368 0.014325302009207546 ['ENSG00000092148|ENST00000399332|HECTD1'] 17672 17673 EHLQLISL True PC9_epitope_Rep6 951.5389314481899 951.53782993586 80.616 2 0.08147225588240647 0.003238159599031368 0.014325731841864803 ['ENSG00000163918|ENST00000296273|RFC4'] 39497 6381 HLDTLTEHY True H1975_Epitope_Rep3 1127.52473793603 1127.52364993586 29.522 2 0.08146846777754878 0.003238159599031368 0.0143269266341256 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 136343 15324 WTDLALQY True H1975_Epitope_Rep2 1008.4916469026 1008.49054993586 64.101 2 0.0814670126345558 0.003238159599031368 0.014327385620283475 ['ENSG00000129055|ENST00000354910|ANAPC13'] 66042 11701 LSEGVTISY True H1975_Epitope_Rep1 967.4862271689901 967.48512993586 49.999 2 0.08146646408425134 0.003238159599031368 0.014327558649467415 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 114369 20217 TPSIPVLTA True PC9_epitope_Rep3 897.51713337445 897.51658496793 83.024 1 0.08146568419605457 0.003238159599031368 0.014327804652920047 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 76617 17544 NQPGVLIQV True PC9_epitope_Rep6 966.5498304850599 966.54872993586 80.123 2 0.0814639601435997 0.003238159599031368 0.014328348492179746 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 40131 8546 HPYPPGPGV True PC9_epitope_Rep1 919.4552018242299 919.45410993586 37.709 2 0.0814510763012501 0.003238159599031368 0.014332413215366107 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 9090 17188 AVIGDVIRV True PC9_epitope_Rep4 940.57056592964 940.56946993586 74.119 2 0.08145008959482235 0.003238159599031368 0.01433272455593428 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 99375 18656 SHTLVSLSL True PC9_epitope_Rep5 955.5338460677501 955.53274993586 76.785 2 0.08144452166583806 0.003238159599031368 0.014334481552162439 ['ENSG00000160445|ENST00000291900|ZER1'] 49356 16850 KESHFQEVL True PC9_epitope_Rep3 1115.56112344475 1115.56002993586 69.966 2 0.08144302316374956 0.003238159599031368 0.01433495444874274 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF'] 127836 14514 VPFAAPATA True PC9_epitope_Rep5 843.4490538146299 843.44850496793 60.827 1 0.08143282198171127 0.003238159599031368 0.014338174121769305 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 23879 10756 EYIRSLNQF True NCI_RA007_Epitope_Rep4 1168.58767254576 1168.58656993586 48.219 2 0.08142831417324771 0.003238159599031368 0.014339597081682537 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 21101 11924 ERADALQL True PC9_epitope_Rep1 914.48214484806 914.48104993586 50.731 2 0.08142416942175873 0.003238159599031368 0.014340905553869639 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 84774 5700 QDVDNASLAR True PC9_epitope_Rep5 1087.52580056519 1087.52470993586 26.92 2 0.08141577488983501 0.003238159599031368 0.014343555998259183 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 29542 7897 FVHPGAATV True PC9_epitope_Rep4 897.4708518883699 897.46974993586 37.804 2 0.0814075708430517 0.003238159599031368 0.014346146743727417 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 73426 23457 MTVDDLLSL True PC9_epitope_Rep5 1005.5052483614099 1005.50414993586 95.211 2 0.08140643345566738 0.003238159599031368 0.014346505952471557 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 104712 17192 SQVDRLVALA True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 71.388 2 0.08139514235032981 0.003238159599031368 0.014350072357516765 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 106842 6684 SVASISLTK True NCI_RA007_Epitope_Rep3 904.52294703088 904.52184993586 33.372 2 0.08138919415788513 0.003238159599031368 0.014351951486075234 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 48911 15285 KEDPFVFIP True H1975_Epitope_Rep3 1090.5698972233 1090.5688099358601 64.202 2 0.08137512007028742 0.003238159599031368 0.014356398633038283 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 139432 21238 YLPPGFLSA True PC9_epitope_Rep1 963.50656869075 963.5060249679301 86.516 1 0.08137395029356254 0.003238159599031368 0.014356768318638826 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 6147 12889 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 54.875 2 0.08136459911634146 0.003238159599031368 0.01435972390058578 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 34760 20558 GQFGVGFYSA True PC9_epitope_Rep5 1031.4712458111896 1031.4706749679299 84.121 1 0.08135918081992453 0.003238159599031368 0.014361436696732312 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 40454 14410 HRDDELYIL True PC9_epitope_Rep6 1172.5825871653199 1172.5814899358602 67.325 2 0.08135707376421146 0.003238159599031368 0.014362102817027309 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 103107 16555 SPHGLVMVGV True PC9_epitope_Rep3 994.5269868654999 994.52588993586 68.819 2 0.08133944005669828 0.003238159599031368 0.01436767863723482 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 76790 14639 NRAINIAL True PC9_epitope_Rep1 883.5239500903899 883.52284993586 61.131 2 0.08132195609972305 0.003238159599031368 0.014373209109931962 ['ENSG00000172336|ENST00000303151|POP7'] 97282 9199 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39686496793 40.376 1 0.08131862103075338 0.003238159599031368 0.014374264275588772 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 95103 7166 RVCEVDNEL True NCI_RA007_Epitope_Rep3 1075.49680893603 1075.49570993586 35.303 2 0.08131702324879479 0.003238159599031368 0.014374769815500692 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'SAMHD1|p.E417Kfs*6|1|0.22|ENSG00000101347|chr20:36911239-36911239|C/-|frameshift_variant'] 76820 12741 NRAPQLLIA True PC9_epitope_Rep4 994.5923640033799 994.5912699358599 56.867 2 0.08131082027438755 0.003238159599031368 0.014376732601201791 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 26699 18031 FIVEEIQRI True PC9_epitope_Rep6 1145.6444591458899 1145.6433699358602 81.985 2 0.08130591249809414 0.003238159599031368 0.014378285729915157 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 35891 4110 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 22.704 2 0.0813029491427262 0.003238159599031368 0.01437922359787802 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 91896 9447 RKLENIVEL True NCI_RA007_Epitope_Rep4 1112.65535818276 1112.6542699358602 43.196 2 0.08130172349389139 0.003238159599031368 0.014379611518435389 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 73503 21423 MVGEGFIEV True PC9_epitope_Rep1 979.4684689298699 979.46792496793 87.242 1 0.0813005679143418 0.003238159599031368 0.014379977270896752 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 75026 11906 NHSDYNMVL True PC9_epitope_Rep6 1091.47059418819 1091.46948993586 57.031 2 0.08129113819139794 0.003238159599031368 0.014382962198356716 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 104317 22864 SQIPFPLSL True PC9_epitope_Rep2 1000.5593325396 1000.55877496793 93.436 1 0.08128652469441379 0.003238159599031368 0.014384422787347 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 48341 19005 IYSIDFTRF True PC9_epitope_Rep6 1160.5866099165999 1160.58550993586 85.746 2 0.08126081415323232 0.003238159599031368 0.01439256504601832 ['ENSG00000175970|ENST00000344651|UNC119B'] 83812 5608 PVLKNPDDPDT True NCI_RA007_Epitope_Rep5 1209.5877321154098 1209.5866299358602 28.259 2 0.08125046290233313 0.003238159599031368 0.014395844398550389 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 121326 9219 VEVDAAVTP True H1975_Epitope_Rep2 899.4600124211499 899.45890993586 40.415 2 0.08124606319247847 0.003238159599031368 0.01439723847119779 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 6919 17850 AQIHDLVLV True PC9_epitope_Rep2 1006.58113061334 1006.58002993586 73.961 2 0.08123835451414914 0.003238159599031368 0.014399681314160688 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 40382 19634 HQTIVVQLL True PC9_epitope_Rep1 1049.62332977849 1049.62222993586 80.347 2 0.08122985762910073 0.003238159599031368 0.01440237438627634 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 97668 8940 SEHGLVVIA True H1975_Epitope_Rep3 923.5076313199099 923.50652993586 39.384 2 0.08122957922746615 0.003238159599031368 0.014402462633152481 ['ENSG00000139684|ENST00000378720|ESD'] 119863 7498 VDFNVPM[Oxidation]K True H1975_Epitope_Rep1 964.4688036634799 964.46770993586 33.839 2 0.081222093401184 0.0032482988434936015 0.014404835656953484 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 90808 11617 RESSLILAV True NCI_RA007_Epitope_Rep4 986.5760452328999 986.57494993586 51.638 2 0.08121781578053161 0.0032482988434936015 0.014406191836921918 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2'] 140846 14556 YSDPSVVFV True H1975_Epitope_Rep3 1011.49131254943 1011.4907749679301 61.356 1 0.08121466597979063 0.0032482988434936015 0.01440719052856928 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF', 'ABCA1|p.L710Q|1|0.28|ENSG00000165029|chr9:104827156-104827156|A/T|missense_variant'] 92077 4941 RKVPGVTAI True NCI_RA007_Epitope_Rep3 939.5865503469499 939.58544993586 26.43 2 0.08121332309471506 0.0032482988434936015 0.01440761633019362 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'FXR1|p.K274Rfs*23|1|0.18|ENSG00000114416|chr3:180953776-180953776|A/-|frameshift_variant', 'ENST00000473375.1_1_3:180669142-180671642:+|nuORF', 'ENST00000573957.1_1_17:7497970-7499300:-|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 14086 9187 DRTGTGTLSV True PC9_epitope_Rep1 1005.50908787189 1005.50798993586 40.188 2 0.08121296695948298 0.0032482988434936015 0.014407729255432848 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 109151 21709 TAMDVVYAL True PC9_epitope_Rep1 981.4841189940099 981.48357496793 88.336 1 0.08120511440558721 0.0032482988434936015 0.014410219395548847 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 107459 19091 SVLVSVSEV True PC9_epitope_Rep2 917.50696261357 917.50586993586 78.801 2 0.08120509337908019 0.0032482988434936015 0.01441022606385099 ['ENSG00000221926|ENST00000649191|TRIM16'] 33596 16332 GLFIIDGK True PC9_epitope_Rep6 861.4960040070499 861.49490993586 75.193 2 0.08120487317170173 0.0032482988434936015 0.014410295900128748 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF'] 73551 9472 MVRPVAVAA True PC9_epitope_Rep3 912.5215075622399 912.52040993586 41.385 2 0.08120441169680222 0.0032482988434936015 0.014410442252699393 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 105084 8724 SRDTTMYAV True PC9_epitope_Rep2 1042.47534521546 1042.4742499358601 38.919 2 0.08119973136547105 0.0032482988434936015 0.014411926655987978 ['ENSG00000165688|ENST00000371717|PMPCA'] 7560 8908 ASELKALGY True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 39.231 2 0.08119827301961678 0.0032482988434936015 0.014412389210949948 ['ENSG00000176102|ENST00000323959|CSTF3'] 2127 11996 AELNAQIITA True H1975_Epitope_Rep2 1042.56587447202 1042.56537496793 51.224 1 0.08118860878913654 0.0032482988434936015 0.014415454842277905 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 135395 19946 WHDSDWIL True PC9_epitope_Rep4 1070.48214484806 1070.48104993586 84.857 2 0.08118529591783875 0.0032482988434936015 0.014416505872857342 ['ENSG00000107625|ENST00000373585|DDX50'] 33010 5596 GIGQDIQPK True NCI_RA007_Epitope_Rep4 954.5134449763399 954.51234993586 28.125 2 0.08118153697522548 0.0032482988434936015 0.014417698509550044 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 106594 8818 STPLAGLAPK True NCI_RA007_Epitope_Rep1 953.55458151233 953.55348993586 38.303 2 0.08116398316212517 0.0032482988434936015 0.014423269205154464 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 85146 19955 QEMETVWTILP True H1975_Epitope_Rep2 1345.6587888806898 1345.6576899358602 82.74 2 0.08115387498541883 0.0032482988434936015 0.014426477946492986 ['ENSG00000198712|ENST00000361739|MT-CO2'] 45257 2695 IPVEQKEGA True PC9_epitope_Rep1 969.5131106231698 969.51200993586 14.789 2 0.0811513030173017 0.0032482988434936015 0.014427294499288923 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 2336 6642 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 30.456 2 0.08114957317741626 0.0032482988434936015 0.01442784371615761 ['ENSG00000172301|ENST00000302362|COPRS'] 38833 4595 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 23.043 2 0.08114816887989826 0.0032482988434936015 0.014428289589112117 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 32610 6858 GGIGTVPVGR True NCI_RA007_Epitope_Rep1 911.5188647099499 911.51776993586 30.68 2 0.08114033604692068 0.0032482988434936015 0.014430776797931488 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 137149 22699 YAVELFEGL True PC9_epitope_Rep2 1039.5226126777097 1039.52207496793 92.807 1 0.08113488966974326 0.0032482988434936015 0.014432506457305464 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 104551 13930 SQPPVQVSV True PC9_epitope_Rep1 939.5025459394699 939.50144993586 58.417 2 0.08112554126438429 0.0032482988434936015 0.014435475775114117 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 96524 11242 SADPNVVDL True H1975_Epitope_Rep3 928.45017601344 928.44962496793 48.345 1 0.08112316654702512 0.0032482988434936015 0.014436230143689806 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 31874 10630 GELLFVHSA True H1975_Epitope_Rep1 971.50763131991 971.50708496793 45.846 1 0.08111542236862715 0.0032482988434936015 0.014438690467896996 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 49104 9768 KEIFQTTVP True H1975_Epitope_Rep2 1061.57571087973 1061.57460993586 42.559 2 0.08111038291875097 0.0032482988434936015 0.014440291711415249 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 23718 22819 EYFESPFTI True PC9_epitope_Rep5 1131.5124419168299 1131.5113499358602 92.766 2 0.08110734589130754 0.0032482988434936015 0.014441256782157038 ['ENSG00000198938|ENST00000362079|MT-CO3'] 76662 10476 NQSDTSVSL True PC9_epitope_Rep2 949.43525422529 949.4347049679301 45.612 1 0.0811032637256015 0.0032482988434936015 0.014442554059856876 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 9043 12151 AVHETLVAV True PC9_epitope_Rep5 937.5232813840498 937.52218993586 51.728 2 0.08110243380449964 0.0032482988434936015 0.014442817815119049 ['ENSG00000141873|ENST00000269740|SLC39A3'] 105671 16638 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.51187496793 69.38 1 0.08109944447533673 0.0032482988434936015 0.014443767884173512 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 43677 11328 IHDGM[Oxidation]NLEL True PC9_epitope_Rep2 1056.49099566004 1056.4898899358602 48.894 2 0.0810823365419665 0.0032482988434936015 0.014449206257373753 ['ENSG00000198258|ENST00000586895|UBL5'] 24679 19872 FALPGLLHA True PC9_epitope_Rep4 937.5385375253701 937.53798496793 84.57 1 0.0810816372922127 0.0032482988434936015 0.014449428579935874 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 106363 20773 STIAILNSV True PC9_epitope_Rep3 916.5229470308801 916.52184993586 85.175 2 0.08108116356123192 0.0032482988434936015 0.014449579201883158 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 33917 7080 GLQVVAVK True NCI_RA007_Epitope_Rep1 812.5119884243599 812.51088993586 31.533 2 0.08106370829284634 0.0032482988434936015 0.014455130100672928 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30260216-30260456:-|nuORF', 'ENSG00000083457|ENST00000263087|ITGAE'] 115779 13145 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45454993586 55.81 2 0.08106325447857128 0.0032482988434936015 0.014455274443478827 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 40938 21314 HSSVIFIF True PC9_epitope_Rep1 948.5069030439199 948.50580993586 86.812 2 0.08106324865081924 0.0032482988434936015 0.014455276297096312 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 6922 16245 AQIHDLVLV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 74.849 2 0.08105970645801634 0.0032482988434936015 0.014456402994093783 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 104066 16503 SQDPTMIGV True PC9_epitope_Rep5 946.44298245802 946.44188993586 68.477 2 0.08105399203473622 0.0032482988434936015 0.01445822080542635 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 111204 13884 THISDTSVVL True PC9_epitope_Rep3 1070.56078909158 1070.5596899358602 58.485 2 0.08105168117461063 0.0032482988434936015 0.014458955972423705 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 128360 7453 VPQTPLHTA True PC9_epitope_Rep1 962.5185303567798 962.51742993586 33.486 2 0.08104933434604523 0.0032482988434936015 0.014459702618127712 ['ENSG00000114738|ENST00000621469|MAPKAPK3'] 87567 8890 QQLGKVVQV True PC9_epitope_Rep4 997.5920296502098 997.59092993586 41.727 2 0.08104495988075704 0.0032482988434936015 0.014461094454824625 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 37037 9943 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 43.234 2 0.0810411132641562 0.0032482988434936015 0.014462318448094098 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 1978 12150 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 51.82 2 0.08103393539648783 0.0032482988434936015 0.01446460270502317 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 48099 20310 IYNGETLVF True PC9_epitope_Rep4 1054.5335117145798 1054.5324099358602 86.265 2 0.08103162905061774 0.0032482988434936015 0.014465336739428016 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 74590 21897 NGFPVFATV True PC9_epitope_Rep1 950.48616759934 950.48561496793 89.04 1 0.08102289549850333 0.0032482988434936015 0.014468116659690743 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 66095 5263 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6222899358602 25.326 2 0.08101770923327921 0.0032482988434936015 0.014469767703075098 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 23928 13812 EYLERAPEL True PC9_epitope_Rep4 1118.5607890915799 1118.5596899358602 61.023 2 0.08100380335460658 0.0032482988434936015 0.014474195500080422 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 134729 17469 VYTSGIYNV True PC9_epitope_Rep5 1014.5022115863001 1014.50110993586 72.196 2 0.08099972887644971 0.0032482988434936015 0.014475493102900455 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 124774 13098 VHDESAFVV True PC9_epitope_Rep5 1001.4818104948898 1001.48070993586 55.385 2 0.08099558674829456 0.0032482988434936015 0.014476812362048504 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 111490 18326 THYDHVLIEL True PC9_epitope_Rep1 1238.6295373577398 1238.62789490379 75.279 3 0.0809954377855867 0.0032482988434936015 0.014476859808458507 ['ENSG00000076003|ENST00000264156|MCM6'] 76665 9904 NQSDTSVSL True PC9_epitope_Rep4 949.43525422529 949.4347049679301 45.747 1 0.08099459983102267 0.0032482988434936015 0.014477126709758696 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 48050 13014 IYLSKPTHW True PC9_epitope_Rep1 1143.60767971435 1143.60604490379 54.93 3 0.08099393586335639 0.0032482988434936015 0.014477338196855408 ['ENSG00000047315|ENST00000314595|POLR2B'] 12824 5538 DLGEEHFK True NCI_RA007_Epitope_Rep2 973.4505103666099 973.44940993586 26.158 2 0.08099264478247167 0.0032482988434936015 0.014477749440453984 ['CON__P02769'] 97894 7589 SELVSNGV True H1975_Epitope_Rep2 803.40249754503 803.40194496793 34.143 1 0.08098928379193572 0.0032482988434936015 0.014478820056681954 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 39850 18053 HPAAFPLPVV True PC9_epitope_Rep6 1046.59130137422 1046.59020993586 82.071 2 0.08098541159593942 0.0032482988434936015 0.014480053605254724 ['ENSG00000108523|ENST00000262482|RNF167'] 48295 5841 IYQRHVYNL True NCI_RA007_Epitope_Rep3 1204.6352914445197 1204.6336349037902 29.956 3 0.08097619685766101 0.0032482988434936015 0.014482989500346932 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 8201 7459 ATFPDPNVK True NCI_RA007_Epitope_Rep2 987.5025459394699 987.50144993586 33.641 2 0.08097211058356803 0.0032482988434936015 0.014484291601081735 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 6680 19511 APYPGFLSV True PC9_epitope_Rep6 949.49091862661 949.48982993586 87.711 2 0.0809653409186333 0.0032482988434936015 0.014486449012018007 ['ENSG00000160447|ENST00000291906|PKN3'] 31477 13025 GEAPVPVLP True H1975_Epitope_Rep1 877.4909186266099 877.49037496793 55.184 1 0.08096182281927725 0.0032482988434936015 0.01448757030697688 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 75185 19733 NIANHFFTV True PC9_epitope_Rep3 1061.52942939365 1061.52832993586 81.131 2 0.08095703314682103 0.0032482988434936015 0.014489097010771805 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 140107 8180 YQNENEVGV True PC9_epitope_Rep6 1050.4618033262998 1050.4607099358602 41.023 2 0.08095554095570412 0.0032482988434936015 0.0144895726761578 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF', 'AKR1B1|p.V48M|1|0.32|ENSG00000085662|chr7:134451678-134451678|C/T|missense_variant'] 92324 13886 RLMNDMTAV True PC9_epitope_Rep1 1049.49978614149 1049.49868993586 58.252 2 0.08095239058936775 0.0032482988434936015 0.014490576965711259 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 1154 7997 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 35.71 2 0.08095092423152815 0.0032482988434936015 0.014491044440856183 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 4119 11644 AHSNLASVL True PC9_epitope_Rep2 910.4872302285 910.48612993586 50.115 2 0.08093637914356147 0.0032482988434936015 0.014495682183093304 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 201 20512 AAFDGGFTV True PC9_epitope_Rep5 883.4075829254699 883.40703496793 83.941 1 0.08093423170006411 0.0032482988434936015 0.014496367019344945 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 8409 16405 ATLSKIIQV True PC9_epitope_Rep5 971.6015317047498 971.60042993586 68.1 2 0.08093090574709244 0.0032482988434936015 0.014497427751189857 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 114770 5695 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.54912993586 28.593 2 0.0809234107666258 0.0032482988434936015 0.014499818359690017 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 98227 2640 SETVMVHQA True NCI_RA007_Epitope_Rep5 1000.4647805317599 1000.46368993586 14.842 2 0.08092049723578355 0.0032482988434936015 0.014500747762918752 ['ENSG00000100647|ENST00000342745|SUSD6'] 69872 18818 LVIDAVREI True PC9_epitope_Rep2 1026.6073453611798 1026.6062499358602 77.754 2 0.08091988322874853 0.0032482988434936015 0.014500943635523308 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 34676 20115 GQDGLYIGV True PC9_epitope_Rep5 920.4603467743199 920.4597949679301 82.419 1 0.08091654370227876 0.0032482988434936015 0.014502009011605857 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 14951 14121 DYFEEYGK True PC9_epitope_Rep1 1049.4341915961297 1049.4330899358602 59.143 2 0.08091556107390119 0.0032482988434936015 0.014502322503781891 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 128228 17833 VPNLQTVSV True PC9_epitope_Rep2 955.53384606775 955.53274993586 73.893 2 0.08090920434494374 0.0032482988434936015 0.014504350671936223 ['ENSG00000105866|ENST00000222584|SP4'] 109024 21752 TAIDILTTV True PC9_epitope_Rep5 945.5382627418501 945.53716993586 88.698 2 0.08089761313013692 0.0032482988434936015 0.014508049631445554 ['ENSG00000198700|ENST00000361565|IPO9'] 139431 21354 YLPPGFLSA True PC9_epitope_Rep1 963.50656869075 963.50546993586 86.97 2 0.08089633623009646 0.0032482988434936015 0.014508457166654555 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 32884 7773 GHSGPITSI True PC9_epitope_Rep2 867.4450310633501 867.44392993586 35.272 2 0.08089424192249138 0.0032482988434936015 0.01450912560875917 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 71313 18347 LYQFNPAFF True NCI_RA007_Epitope_Rep3 1145.5545815123298 1145.5534899358602 80.347 2 0.08088131240391977 0.0032482988434936015 0.014513252974416508 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 117619 12406 TVTETTVTV True PC9_epitope_Rep1 949.49679185269 949.49568993586 52.581 2 0.08087381464199886 0.0032482988434936015 0.014515646916776174 ['ENST00000376769.6_1_6:30035187-30036127:+|nuORF', 'ENSG00000204619|ENST00000376772|PPP1R11'] 77609 6531 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.4608649679301 30.088 1 0.08087113460349661 0.0032482988434936015 0.014516502709601588 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 11603 21328 DGFLSELTQQL True NCI_RA007_Epitope_Rep2 1249.6190322436898 1249.61792993586 88.243 2 0.08086579173994078 0.0032482988434936015 0.014518208939739291 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 18132 12292 EIIRQLNGV True PC9_epitope_Rep4 1040.59784330664 1040.59674993586 55.096 2 0.08085380868125731 0.0032482988434936015 0.014522036383132712 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 31285 20437 GDIEQFLITG True PC9_epitope_Rep2 1091.54989005471 1091.54937496793 84.038 1 0.08084208499422164 0.0032482988434936015 0.014525781897208349 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 49540 8867 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 44.042 2 0.0808405953577863 0.0032482988434936015 0.014526257874959305 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 138345 13066 YHETLGEAL True PC9_epitope_Rep5 1031.4923751785898 1031.4912699358601 55.264 2 0.08082759231803 0.0032482988434936015 0.014530413306520504 ['ENSG00000077147|ENST00000371142|TM9SF3', 'ENST00000475401.1_1_10:98336385-98336556:-|nuORF'] 103726 5203 SPVFTSRSAA True PC9_epitope_Rep6 1021.51925863277 1021.51816993586 27.774 2 0.08082595581424644 0.0032482988434936015 0.01453093636926552 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 75212 13366 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 56.545 2 0.0808253638890645 0.0032482988434936015 0.014531125565969605 ['ENSG00000116285|ENST00000377482|ERRFI1'] 11610 5256 DGGAWGTEQR True NCI_RA007_Epitope_Rep5 1075.46828568907 1075.46718993586 26.913 2 0.08081085168312803 0.0032482988434936015 0.014535764816167317 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 38944 10160 HHIGDRSLSL True PC9_epitope_Rep1 1133.59415490853 1133.5924949037899 43.956 3 0.08079392084740016 0.0032482988434936015 0.014541179006305438 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 140542 5302 YRPGTVALR True NCI_RA007_Epitope_Rep4 1031.5876129761098 1031.58650993586 26.948 2 0.08079181768932381 0.0032482988434936015 0.01454185169204124 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 99155 13825 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.4914349679301 58.198 1 0.08079034110718086 0.0032482988434936015 0.014542323987682262 ['ENSG00000132646|ENST00000379143|PCNA'] 111194 7638 THILTPQKL True PC9_epitope_Rep4 1049.62332977849 1049.62222993586 36.761 2 0.08077889414311132 0.0032482988434936015 0.01454598587090719 ['ENSG00000136854|ENST00000373299|STXBP1'] 114691 11015 TQHAVGIVV True PC9_epitope_Rep1 922.5236157372199 922.52250993586 47.257 2 0.08077804641398773 0.0032482988434936015 0.014546257093774703 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 88232 10845 QSDGGGLLY True H1975_Epitope_Rep3 908.4239612655999 908.4234149679301 46.797 1 0.08076661517814578 0.0032482988434936015 0.014549914871776521 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'DYM|p.G248V|1|0.16|ENSG00000141627|chr18:49331884-49331884|C/A|missense_variant', 'ENST00000418472.6_1_18:46856042-46938282:-|nuORF'] 107969 8913 SVYSDIVGK True NCI_RA007_Epitope_Rep3 966.5022115862998 966.50110993586 42.142 2 0.08076229655495533 0.0032482988434936015 0.014551296973353662 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 112189 18682 TKFGGIVVL True PC9_epitope_Rep4 932.5695033004798 932.56840993586 79.94 2 0.0807550151575923 0.0032482988434936015 0.014553627538783117 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 43687 17284 IHDGMNLEL True PC9_epitope_Rep5 1040.49608066004 1040.49498993586 71.489 2 0.08075200757019908 0.0032482988434936015 0.014554590282898117 ['ENSG00000198258|ENST00000586895|UBL5'] 69922 16408 LVKDVFISA True PC9_epitope_Rep1 990.57498260374 990.57388993586 67.936 2 0.08074141478217285 0.0032482988434936015 0.014557981563829906 ['ENSG00000008018|ENST00000262193|PSMB1'] 100300 11388 SKFPTQISL True NCI_RA007_Epitope_Rep5 1019.5651461960299 1019.56404993586 50.454 2 0.08073814177292948 0.0032482988434936015 0.01455902956742658 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 31471 5510 GEAPPSAPP True H1975_Epitope_Rep2 821.3919328613299 821.39082993586 26.206 2 0.08073457974286107 0.0032482988434936015 0.01456017019459559 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 109674 4472 TEAVPRAPA True H1975_Epitope_Rep2 910.4872302284998 910.48612993586 22.314 2 0.08073275552678505 0.0032482988434936015 0.014560754374367477 ['ENSG00000168476|ENST00000306306|REEP4'] 136910 16787 YAFPKAVSV True PC9_epitope_Rep3 980.5331177917599 980.53202993586 69.719 2 0.08072503554324348 0.0032482988434936015 0.014563226834652554 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 103994 22254 SQDAGIWYL True PC9_epitope_Rep3 1051.49746055903 1051.49636993586 90.885 2 0.08070910899596194 0.0032482988434936015 0.014568328834132512 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 31633 13554 GEFGGFGSV True NCI_RA007_Epitope_Rep5 855.3762827971899 855.37573496793 58.824 1 0.08068919862824514 0.0032482988434936015 0.014574709388729559 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 76029 22882 NMAELFAVV True PC9_epitope_Rep2 992.5001034113199 992.49900993586 93.512 2 0.08067407862244316 0.0032482988434936015 0.014579556554374751 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 70496 10703 LVVSTQTALA True H1975_Epitope_Rep1 1001.5757108797299 1001.57517496793 46.128 1 0.08066854712339509 0.0032482988434936015 0.014581330217568864 ['CON__P02769'] 93044 6067 RPLQDPPSA True PC9_epitope_Rep5 979.5086939490699 979.50758993586 28.327 2 0.0806668459900812 0.0032482988434936015 0.014581875722932118 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF', 'ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000486102.5_1_3:49728598-49742525:+|nuORF'] 115119 10805 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 46.877 2 0.08066500277132807 0.0032482988434936015 0.014582466812664117 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 48083 8130 IYNGDMEKI True NCI_RA007_Epitope_Rep4 1081.51139637101 1081.51028993586 38.063 2 0.080655519896688 0.0032482988434936015 0.014585508168423413 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 85777 5932 QHDPSAVAV True PC9_epitope_Rep1 922.4508447197799 922.44974993586 27.631 2 0.08065373292982159 0.0032482988434936015 0.01458608135253215 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 47312 13476 IVEESVTGV True PC9_epitope_Rep1 931.4862271689899 931.48512993586 56.693 2 0.08065068089393708 0.0032482988434936015 0.014587060366592046 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2', 'ENST00000492628.1_1_7:129040195-129045055:+|nuORF'] 53156 15274 KQADPFASL True PC9_epitope_Rep2 975.5025459394699 975.50144993586 64.027 2 0.08062004474962679 0.0032482988434936015 0.014596891059716469 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 93528 18742 RQLEEEGITFV True PC9_epitope_Rep3 1319.6721304457096 1319.6710299358601 77.314 2 0.08061929018475131 0.0032482988434936015 0.014597133266922253 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 97280 9283 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39630993586 40.665 2 0.08061752321471037 0.0032482988434936015 0.014597700460026198 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 46665 4917 ITDQNSDGY True H1975_Epitope_Rep1 1011.4145187807098 1011.41342993586 23.988 2 0.08061214927250991 0.0032482988434936015 0.014599425609364888 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 24905 16990 FAYGYIEDL True H1975_Epitope_Rep2 1089.50187723313 1089.5007899358602 70.601 2 0.08061036859666372 0.0032482988434936015 0.0145999972861842 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 26199 19875 FHDHALMIIF True PC9_epitope_Rep4 1242.6219498795 1242.62029490379 84.581 3 0.0806017158460515 0.0032482988434936015 0.014602775505848417 ['ENSG00000198712|ENST00000361739|MT-CO2'] 138506 19870 YHSFVSSVF True PC9_epitope_Rep1 1071.5025459394699 1071.5014499358601 81.248 2 0.08059794455274231 0.0032482988434936015 0.014603986545292458 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 73453 15674 MVAPAVASV True PC9_epitope_Rep1 843.4524249429099 843.45187496793 65.112 1 0.08059613637996473 0.0032482988434936015 0.014604567219941597 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 1164 7806 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.45342993586 35.009 2 0.08059030810543381 0.0032482988434936015 0.014606439052962166 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 72335 23523 MIPLLLAAL True PC9_epitope_Rep4 953.5983609006099 953.59781496793 98.786 1 0.0805875218577104 0.0032482988434936015 0.014607333975344364 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 115767 12925 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 54.79 1 0.08058585569021999 0.0032482988434936015 0.014607869160696956 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 111301 13447 THMPSVVGV True PC9_epitope_Rep3 925.4691376362099 925.46804993586 56.769 2 0.08058460466789397 0.0032482988434936015 0.014608271010419994 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 26469 12178 FIDTTSKF True PC9_epitope_Rep2 957.48074786573 957.47964993586 52.155 2 0.08058230414452153 0.0032482988434936015 0.01460901000482715 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 89244 17690 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48561496793 76.07 1 0.08057586151962995 0.0032482988434936015 0.014611079748016455 ['ENSG00000167658|ENST00000309311|EEF2'] 74313 8508 NELGAAAVAA True H1975_Epitope_Rep2 885.4555957470499 885.45504496793 37.681 1 0.08057021756632414 0.0032482988434936015 0.014612893137524998 ['ENST00000216500.9_1_14:60631944-60632160:-|nuORF'] 107352 20162 SVLGSLSSV True PC9_epitope_Rep1 847.4650978015901 847.46400993586 82.382 2 0.08056732067550586 0.0032482988434936015 0.014613823983921569 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF', 'nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 104981 14807 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59449490379 61.954 3 0.08055510102403968 0.0032482988434936015 0.014617751087340475 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 90072 5102 REAEFTKSIA True H1975_Epitope_Rep3 1150.59823722946 1150.5965849037902 24.736 3 0.08055457587598915 0.0032482988434936015 0.014617919879507543 ['ENSG00000118363|ENST00000263672|SPCS2'] 96518 11229 SADPNVVDL True H1975_Epitope_Rep1 928.45017601344 928.44962496793 48.166 1 0.08055295501354885 0.0032482988434936015 0.01461844086579174 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 98915 16052 SHADVVNLL True PC9_epitope_Rep2 966.51344497634 966.51234993586 67.0 2 0.08055277974224605 0.0032482988434936015 0.014618497203474608 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 96243 15305 RYQDIIHSI True PC9_epitope_Rep1 1143.6036569630699 1143.60254993586 63.692 2 0.08054430596455112 0.0032482988434936015 0.014621221183528023 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 35418 17939 GSDVVDWLY True H1975_Epitope_Rep2 1052.48147614172 1052.48097496793 74.324 1 0.08053587604246319 0.0032482988434936015 0.014623931537618831 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 24891 16721 FAYEGPMYL True H1975_Epitope_Rep2 1089.4841189940098 1089.48357496793 69.554 1 0.08051588411505417 0.0032482988434936015 0.014630361142357235 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 24676 20812 FALPGLLHA True PC9_epitope_Rep3 937.5385375253701 937.53798496793 85.325 1 0.08051527626323358 0.0032482988434936015 0.014630556675090655 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 29496 21591 FVFPGELLL True H1975_Epitope_Rep3 1033.5848190114498 1033.5837299358602 90.215 2 0.08051494724190886 0.0032482988434936015 0.014630662515128597 ['ENSG00000105281|ENST00000542575|SLC1A5'] 104289 21134 SQIISLQTL True PC9_epitope_Rep1 1001.5757108797301 1001.5746099358599 86.122 2 0.08050721681395019 0.0032482988434936015 0.014633149456386938 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 68640 20758 LTIEDGIFEV True PC9_epitope_Rep6 1134.58085582982 1134.57974993586 92.605 2 0.08050495538534452 0.0032482988434936015 0.01463387705114841 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 32901 10906 GHVAPSVSL True PC9_epitope_Rep3 865.4657665079301 865.46466993586 46.932 2 0.08049467581401641 0.0032482988434936015 0.01463718484001345 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 26960 11872 FLDTNETPY True H1975_Epitope_Rep3 1098.48695544498 1098.48637496793 50.815 1 0.08049392319184541 0.0032482988434936015 0.014637427048372807 ['ENSG00000079246|ENST00000392132|XRCC5'] 41406 17392 HYGLPVVV True PC9_epitope_Rep2 882.49633836022 882.49524993586 72.16 2 0.08049070081358138 0.0032482988434936015 0.01463846411442651 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 35417 17789 GSDVVDWLY True H1975_Epitope_Rep1 1052.48147614172 1052.48097496793 74.053 1 0.08048673666117151 0.0032482988434936015 0.014639740001936168 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 28082 11977 FQTHTTPVL True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 51.066 2 0.08048440752704553 0.0032482988434936015 0.014640489697064439 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 9839 17908 AYLEAYKEF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 73.9 2 0.08048157120068905 0.0032482988434936015 0.014641402694365858 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 31613 11475 GEFAYTYAA True H1975_Epitope_Rep3 991.4287122928699 991.42816496793 49.26 1 0.0804810705645539 0.0032482988434936015 0.014641563851824864 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1'] 24710 20152 FAMPYFIQV True H1975_Epitope_Rep2 1114.55213898418 1114.5510499358602 83.508 2 0.08047286003047677 0.0032482988434936015 0.014644207103935833 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|12|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 55476 11850 LAGDGVGAVNI True H1975_Epitope_Rep3 984.52400966004 984.5234649679301 50.729 1 0.0804724416309061 0.0032482988434936015 0.014644341813056932 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 105517 5148 SSAGPGLLK True NCI_RA007_Epitope_Rep3 828.4705175352 828.46942993586 27.242 2 0.08047244028317196 0.0032482988434936015 0.014644342246979138 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 31683 10310 GEFSITYKP True NCI_RA007_Epitope_Rep5 1040.5178616504397 1040.51727496793 46.288 1 0.08047194148231551 0.0032482988434936015 0.01464450284384929 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 53029 9670 KPLEPVSTV True PC9_epitope_Rep3 968.55424715916 968.55314993586 42.146 2 0.080469091200933 0.0032482988434936015 0.0146454205689314 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 110966 20081 THALPIPVI True PC9_epitope_Rep1 959.5804023373499 959.57930993586 82.069 2 0.08046641460225584 0.0032482988434936015 0.014646282421227631 ['ENSG00000136628|ENST00000366923|EPRS1'] 115314 11760 TRHPFLTAL True PC9_epitope_Rep6 1054.59236400338 1054.59126993586 56.396 2 0.08046413253853732 0.0032482988434936015 0.014647017272630654 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 32336 19180 GFGFVLFK True PC9_epitope_Rep6 913.5061747679299 913.50506993586 86.428 2 0.0804559210821171 0.0032482988434936015 0.014649661744095491 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 72266 12525 MHSIGGVQV True PC9_epitope_Rep3 926.4643866089399 926.46328993586 53.202 2 0.08039587790988412 0.0032482988434936015 0.014669012039168828 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 72900 19304 MPTLPPPSV True PC9_epitope_Rep3 937.49428975489 937.49318993586 79.476 2 0.08039373772447725 0.0032482988434936015 0.014669702204928345 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 74815 13419 NHDVQVIL True PC9_epitope_Rep1 936.50288029264 936.50178993586 56.477 2 0.08038925663673266 0.0032482988434936015 0.014671147362047809 ['ENSG00000179151|ENST00000315127|EDC3'] 115026 8073 TRATEGMVVA True PC9_epitope_Rep5 1033.5226297610498 1033.5215299358601 35.991 2 0.08038646575846348 0.0032482988434936015 0.014672047491620245 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 74731 7327 NHANGLTL True PC9_epitope_Rep2 838.4297153523801 838.42860993586 33.565 2 0.08038162899092223 0.0032482988434936015 0.01467360759529121 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 89584 8738 QYNPKFQTL True NCI_RA007_Epitope_Rep4 1137.58185888933 1137.5807699358602 40.404 2 0.08037853914710719 0.0032482988434936015 0.01467460430850177 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 28150 19656 FRDFIPVVL True PC9_epitope_Rep6 1104.6331661861998 1104.63206993586 88.266 2 0.08037440827500238 0.0032482988434936015 0.014675936932787043 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 91820 5355 RKISNNITL True NCI_RA007_Epitope_Rep5 1057.62439240765 1057.6232899358602 27.289 2 0.08036646578082471 0.0032482988434936015 0.014678499509438142 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 91353 7821 RGYGATVSL True NCI_RA007_Epitope_Rep5 922.4872302284999 922.48612993586 36.784 2 0.08036057090471409 0.0032482988434936015 0.014680401710909102 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 40597 10244 HRIDPTVL True PC9_epitope_Rep5 949.53451477409 949.53340993586 44.39 2 0.0803564400511039 0.0032482988434936015 0.014681734822373565 ['ENSG00000110536|ENST00000326674|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-2|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-3|PTPMT1'] 89418 15888 QYASLMHSF True PC9_epitope_Rep4 1082.48551597634 1082.4844099358602 69.043 2 0.08035307366954943 0.0032482988434936015 0.014682821306833356 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 35170 15087 GQWYGPNTV True PC9_epitope_Rep6 1020.4664947839199 1020.46538993586 70.089 2 0.08035031260212312 0.0032482988434936015 0.0146837124851062 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 69466 20382 LVAEDIPLLFS True H1975_Epitope_Rep3 1215.6750905678298 1215.6739899358602 85.22 2 0.08034412549380505 0.0032482988434936015 0.014685709656355498 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 84838 9150 QEAISVVA True H1975_Epitope_Rep3 815.4388830537499 815.43833496793 40.185 1 0.08033574497803014 0.0032482988434936015 0.014688415255589447 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B'] 60524 16117 LHDENILL True PC9_epitope_Rep1 965.51819600361 965.51708993586 66.81 2 0.08033394431338897 0.0032482988434936015 0.01468899665029923 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'RPGRIP1L|p.R321Afs*8|1|0.43|ENSG00000103494|chr16:53672939-53672940|-/T|frameshift_variant'] 1706 9773 AEGPEVICA True H1975_Epitope_Rep1 887.4058686733099 887.40531496793 42.521 1 0.0803306187357281 0.0032482988434936015 0.0146900704622985 ['ENSG00000010292|ENST00000315579|NCAPD2'] 26130 16736 FGVVVVGVGR True PC9_epitope_Rep1 987.5865503469497 987.58544993586 69.202 2 0.08032667290485666 0.0032482988434936015 0.014691344646261852 ['ENST00000453612.1_1_7:43810757-43831091:+|nuORF', 'ENSG00000106605|ENST00000265523|BLVRA'] 72275 20012 MHYPTALLF True PC9_epitope_Rep4 1091.54738795691 1091.5462899358602 85.11 2 0.08032054303158932 0.0032482988434936015 0.014693324304455493 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 39202 14059 HIGDAVVI True PC9_epitope_Rep3 822.4599528515 822.45884993586 59.167 2 0.0803125025502151 0.0032482988434936015 0.01469592137723059 ['ENSG00000132646|ENST00000379143|PCNA'] 142732 10129 YYQHIVTTL True NCI_RA007_Epitope_Rep4 1136.5866099166 1136.58550993586 45.818 2 0.08030508476110965 0.0032482988434936015 0.014698317701912742 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 144 15961 AADEVLAVL True NCI_RA007_Epitope_Rep5 899.4963979298699 899.49530993586 68.12 2 0.0802931843706542 0.0032482988434936015 0.014702162900335916 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'nc|ENSG00000144028|O75643-2|SNRNP200'] 12018 13057 DHSGQVTIL True PC9_epitope_Rep3 968.49270953176 968.49160993586 55.25 2 0.08027162125024286 0.0032482988434936015 0.014709132675259239 ['ENSG00000139668|ENST00000298125|WDFY2'] 87734 9284 QRALPSEEL True PC9_epitope_Rep4 1041.54547338061 1041.54436993586 43.316 2 0.08026411086272 0.0032482988434936015 0.01471156095914217 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 79256 8964 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 39.325 2 0.08026032030658867 0.0032482988434936015 0.014712786677132663 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 49577 10974 KFSPNTSQF True PC9_epitope_Rep1 1054.5083595959002 1054.5072699358602 47.1 2 0.08025013068252754 0.0032482988434936015 0.014716082078243887 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 1810 7015 AEHRIDFVA True NCI_RA007_Epitope_Rep4 1056.53524305008 1056.5341499358601 33.611 2 0.08023973351614026 0.0032482988434936015 0.014719445312677201 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000488235.1_1_3:195969427-195975126:-|nuORF'] 44576 22340 ILPPQLALF True PC9_epitope_Rep4 1010.6164534928998 1010.61534993586 94.168 2 0.08023902882319377 0.0032482988434936015 0.014719673290024217 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 23724 19091 EYFKSFNF True PC9_epitope_Rep4 1080.4916469026 1080.4905499358601 81.524 2 0.08023641266472466 0.0032482988434936015 0.014720519680293932 ['ENSG00000151470|ENST00000425929|C4orf33'] 120167 3898 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 20.038 2 0.08023570202696838 0.0032482988434936015 0.014720749596594683 ['ENSG00000155506|ENST00000518297|LARP1'] 97452 13434 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.4074249679301 56.945 1 0.08023524443627188 0.0032482988434936015 0.014720897645054342 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 118400 14764 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 61.609 2 0.08023294640210142 0.0032482988434936015 0.014721641169936297 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 88559 9936 QTDHLFFKY True H1975_Epitope_Rep1 1197.5818588893299 1197.58021490379 43.154 3 0.08023273122299404 0.0032482988434936015 0.014721710792555898 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 39196 13899 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 58.299 2 0.08022757874805136 0.0032482988434936015 0.014723378001914717 ['ENSG00000132646|ENST00000379143|PCNA'] 29419 14549 FVDSNLLY True H1975_Epitope_Rep2 969.4807478657299 969.47964993586 61.119 2 0.08022559346653675 0.0032482988434936015 0.014724020435525488 ['nc|ENSG00000155792|Q8TB45-2|DEPTOR', 'ENSG00000155792|ENST00000286234|DEPTOR'] 42684 15917 IEIPSVVSV True H1975_Epitope_Rep2 941.54334812229 941.54224993586 66.426 2 0.08022417148364505 0.0032482988434936015 0.014724480602828124 ['ZBTB20|p.I383*|1|0.24|ENSG00000181722|chr3:114350932-114350932|G/-|frameshift_variant', 'nc|ENSG00000181722|Q9HC78-2|ZBTB20', 'ZBTB20|p.P692Lfs*43|1|0.14|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant', 'ENSG00000181722|ENST00000675478|ZBTB20'] 77309 10713 NSDPGLAVGY True H1975_Epitope_Rep3 991.46107505031 991.46052496793 46.284 1 0.08021943656531706 0.0032482988434936015 0.014726012964912287 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 116915 7731 TVFSHAQTV True PC9_epitope_Rep2 988.4977949121999 988.49668993586 35.112 2 0.08021161763066346 0.0032482988434936015 0.01472854373446644 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 111209 13713 THISDTSVVL True PC9_epitope_Rep5 1070.56078909158 1070.5596899358602 57.775 2 0.08020606863223231 0.0032482988434936015 0.014730340036531958 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 132050 20986 VTTDVSYLL True PC9_epitope_Rep2 1009.53317736141 1009.53208993586 86.173 2 0.08019422854460333 0.0032482988434936015 0.014734173553643431 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 88527 12622 QTALVELLK True NCI_RA007_Epitope_Rep1 1013.6120963884499 1013.61098993586 53.077 2 0.08019417863374985 0.0032482988434936015 0.014734189715476879 ['CON__P02769'] 104463 15794 SQLPPLREI True PC9_epitope_Rep5 1051.60259433391 1051.6014899358602 65.739 2 0.08015999630520207 0.0032482988434936015 0.014745262332490476 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 128300 6158 VPPPPPIAR True H1975_Epitope_Rep1 942.56508662638 942.56398993586 28.756 2 0.08015835225457275 0.0032482988434936015 0.014745795083066554 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 24455 21339 FADPDDLPGL True PC9_epitope_Rep5 1058.49204082542 1058.49094993586 87.139 2 0.08014394184224154 0.0032482988434936015 0.0147504655133857 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 110186 8299 TEQDVLTVKP True H1975_Epitope_Rep2 1128.60265390356 1128.60154993586 36.873 2 0.08014287362179137 0.0032482988434936015 0.014750811779942766 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 27805 21348 FQDDPDIIAF True PC9_epitope_Rep4 1179.5448046742697 1179.54370993586 90.283 2 0.08013456108089274 0.0032482988434936015 0.014753506572739092 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'nc|ENSG00000132912|Q9UJW0-2|DCTN4'] 87342 10546 QPSEVLRTV True PC9_epitope_Rep3 1027.56620882519 1027.5651099358602 45.51 2 0.08013210778208402 0.0032482988434936015 0.014754301981079606 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 48263 8313 IYQRDPLKL True NCI_RA007_Epitope_Rep1 1144.6604435631998 1144.65880490379 36.336 3 0.08013001481986387 0.0032482988434936015 0.014754980592865159 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 104177 20755 SQFPGAITL True PC9_epitope_Rep2 932.4967322830399 932.49618496793 85.276 1 0.0801281031859251 0.0032605969400551793 0.014755600437200513 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 26011 18427 FGFVTFDDHD True PC9_epitope_Rep6 1198.4931034545798 1198.49200993586 83.524 2 0.08012034895702197 0.0032605969400551793 0.014758114983958358 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 47131 20665 ITVGSLVTV True PC9_epitope_Rep2 887.5327834385901 887.5322349679301 84.925 1 0.08011997654824715 0.0032605969400551793 0.014758235759034177 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 1741 11499 AEGPVAVVV True H1975_Epitope_Rep3 839.4752685624699 839.47472496793 49.355 1 0.08010734296184935 0.0032605969400551793 0.014762333478168152 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 142857 13951 YYTDIM[Oxidation]HTL True PC9_epitope_Rep4 1171.5219614351497 1171.5208699358602 61.565 2 0.08009533449328371 0.0032605969400551793 0.014766229427241189 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 54694 17989 KYLVIGDLLF True NCI_RA007_Epitope_Rep3 1179.69034670915 1179.68924993586 78.827 2 0.08008963165310459 0.0032605969400551793 0.014768079956629309 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 34865 23303 GQLDFSEFL True PC9_epitope_Rep5 1054.49712620586 1054.49657496793 94.615 1 0.08008823838080575 0.0032605969400551793 0.01476853209617715 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 71802 7350 MEGPTPVSA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 33.212 1 0.08008779418244891 0.0032605969400551793 0.014768676248502073 ['ENSG00000198786|ENST00000361567|MT-ND5'] 111302 11763 THMPSVVGV True PC9_epitope_Rep4 925.4691376362099 925.46804993586 53.012 2 0.08007230170545869 0.0032605969400551793 0.014773704729041555 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 8723 21959 AVATDFFTV True PC9_epitope_Rep1 969.48074786573 969.47964993586 89.283 2 0.08005876703879201 0.0032605969400551793 0.014778099064166904 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 109622 7998 TEAGFPEQA True H1975_Epitope_Rep2 948.4188758851598 948.41776993586 35.714 2 0.0800554572338338 0.0032605969400551793 0.014779173853313024 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 97672 3371 SEHINEGETA True H1975_Epitope_Rep1 1085.46253160229 1085.46142993586 17.101 2 0.08004943706577942 0.0032605969400551793 0.01478112896319276 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 14898 22816 DYATIFNNL True PC9_epitope_Rep2 1069.5080252427301 1069.50747496793 93.249 1 0.08003977897977588 0.0032605969400551793 0.014784266029311788 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 45479 23614 IQLTALWPIAA True PC9_epitope_Rep5 1195.69649471875 1195.69538993586 95.81 2 0.08003807880555024 0.0032605969400551793 0.014784818331517244 ['ENST00000525647.1_1_11:118133556-118134958:-|nuORF', 'ENST00000527282.1_1_11:118133507-118134958:-|nuORF', 'ENSG00000149573|ENST00000278937|MPZL2', 'ENST00000529376.5_1_11:118130767-118134958:-|nuORF'] 99126 13020 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 55.364 2 0.08003670293676965 0.0032605969400551793 0.014785265297126536 ['ENSG00000132646|ENST00000379143|PCNA'] 24798 9004 FATHAAALSVR True PC9_epitope_Rep3 1142.6196413803798 1142.61799490379 39.578 3 0.08003018588757047 0.0032605969400551793 0.014787382601796665 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 84255 21851 PYNDYFEYF True PC9_epitope_Rep4 1256.50260550912 1256.50207496793 92.252 1 0.08002213176558483 0.0032605969400551793 0.014789999673716981 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 96926 11954 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 51.003 2 0.08001510827848377 0.0032605969400551793 0.014792282209548528 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 38076 11981 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.44900993586 51.081 2 0.08001219501033323 0.0032605969400551793 0.014793229078046002 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 71220 20966 LYPEGLAQL True PC9_epitope_Rep5 1002.5385970950199 1002.53750993586 85.705 2 0.08000393303532066 0.0032605969400551793 0.014795914688439615 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 88162 9568 QRVDSPVTV True PC9_epitope_Rep5 999.5349086969098 999.53380993586 41.764 2 0.08000288818125788 0.0032605969400551793 0.014796254357777166 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 107456 19422 SVLVSVSEV True PC9_epitope_Rep1 917.50696261357 917.50586993586 79.519 2 0.08000108596549824 0.0032605969400551793 0.014796840253342002 ['ENSG00000221926|ENST00000649191|TRIM16'] 110942 12703 THAAQQILL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 53.886 2 0.07999123406875731 0.0032605969400551793 0.014800043462826524 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 26375 7565 FHTTPNTSL True PC9_epitope_Rep6 1016.49270953176 1016.49160993586 38.373 2 0.07998769479489981 0.0032605969400551793 0.014801194367833856 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 4158 14942 AHTPVIISV True PC9_epitope_Rep1 935.54401682863 935.54290993586 62.297 2 0.0799784978407157 0.0032605969400551793 0.014804185435441871 ['ENSG00000182993|ENST00000330828|C12orf60'] 2490 14024 AEQLTLLDA True H1975_Epitope_Rep2 972.5127762699999 972.51166993586 59.093 2 0.07997673209705704 0.0032605969400551793 0.014804759761911774 ['ENSG00000237441|ENST00000497454|RGL2', 'ENST00000494550.5_1_6:33263795-33265760:-|nuORF', 'nc|ENSG00000237441|O15211-2|RGL2', 'ENST00000483151.5_1_6:33261379-33266279:-|nuORF', 'nc|ENSG00000107263|Q13905-3|RAPGEF1', 'nc|ENSG00000107263|Q13905-2|RAPGEF1', 'nc|ENSG00000107263|Q13905|RAPGEF1', 'nc|ENSG00000107263|Q13905-4|RAPGEF1', 'ENSG00000107263|ENST00000683357|RAPGEF1'] 108353 21483 SYLDSVHFF True PC9_epitope_Rep3 1113.51311062317 1113.51200993586 87.927 2 0.07997513362540286 0.0032605969400551793 0.014805279699415743 ['ENSG00000100393|ENST00000263253|EP300'] 39055 16190 HHSNILLTF True PC9_epitope_Rep2 1080.5716285588 1080.5705299358601 67.526 2 0.07996187167702207 0.0032605969400551793 0.014809594094591245 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 92784 20227 RPAGALVALVV True PC9_epitope_Rep3 1064.67061432408 1064.66950993586 83.063 2 0.07995415546335584 0.0032605969400551793 0.014812104885458099 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 117841 20046 TVYEGFISA True PC9_epitope_Rep3 985.4756624852898 985.47511496793 82.356 1 0.07994839650735223 0.0032605969400551793 0.014813979060917132 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 104183 20039 SQFPGAITL True PC9_epitope_Rep4 932.4967322830399 932.49618496793 85.217 1 0.07992718414882023 0.0032605969400551793 0.014820884255493914 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 78203 15606 NYENKQYLF True PC9_epitope_Rep5 1217.57168812845 1217.5705899358602 65.04 2 0.07992692643114274 0.0032605969400551793 0.014820968168072182 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 1861 12118 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 51.696 1 0.07992320968287903 0.0032605969400551793 0.014822178386483453 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 98073 9511 SEQSVAVMP True H1975_Epitope_Rep2 946.4429824580199 946.44188993586 41.553 2 0.07992311771202515 0.0032605969400551793 0.014822208334484437 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 17342 10483 EHAVGYAL True PC9_epitope_Rep1 858.42356734278 858.42246993586 45.211 2 0.0799168631160453 0.0032605969400551793 0.014824245119673098 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant', 'ENST00000494697.5_1_20:2633306-2634895:+|nuORF', 'ENST00000470143.1_1_20:2633306-2634188:+|nuORF'] 137436 5383 YEDGARIEA True H1975_Epitope_Rep3 1022.4668887067398 1022.46578993586 25.773 2 0.07990109290291574 0.0032605969400551793 0.014829381792465983 ['nc|ENSG00000247077|Q96HS1-2|PGAM5', 'ENSG00000247077|ENST00000498926|PGAM5'] 57685 5778 LEEGSVEA True H1975_Epitope_Rep2 832.3814277472799 832.38087496793 27.219 1 0.07990092108797912 0.0032605969400551793 0.01482943776519155 ['ENSG00000007080|ENST00000445755|CCDC124'] 32243 5991 GEYRGSDFTA True NCI_RA007_Epitope_Rep4 1101.47270236317 1101.4716099358602 29.662 2 0.07989836686772671 0.0032605969400551793 0.014830269885378826 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 88619 14805 QTEDNMLFY True H1975_Epitope_Rep1 1159.4855755459898 1159.48446993586 62.174 2 0.07988228411773562 0.0032605969400551793 0.014835510367724389 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 31839 12395 GEISGTIAI True H1975_Epitope_Rep2 859.46509780159 859.46454496793 52.762 1 0.07988076739786108 0.0032605969400551793 0.01483600467263807 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000514482.1_1_4:190862182-190882061:+|nuORF'] 48119 20381 IYPATIASI True PC9_epitope_Rep3 947.53278343859 947.53168993586 83.646 2 0.07987292399499776 0.0032605969400551793 0.014838561114231576 ['nc|ENSG00000205571|Q16637-4|SMN1', 'nc|ENSG00000205571|Q16637-2|SMN1', 'nc|ENSG00000205571|Q16637-3|SMN1', 'ENSG00000205571|ENST00000380743|SMN2', 'ENSG00000172062|ENST00000380707|SMN1'] 8168 12111 ATESVSLYY True H1975_Epitope_Rep1 1031.48114178855 1031.48057496793 51.599 1 0.07987192195045406 0.0032605969400551793 0.014838887745594368 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 5849 19385 APFLASAVSA True PC9_epitope_Rep3 932.4967322830399 932.49562993586 79.788 2 0.0798659810944888 0.0032605969400551793 0.014840824394456179 ['ENSG00000146242|ENST00000369750|TPBG'] 35647 11586 GTDMEPSLY True H1975_Epitope_Rep2 1011.42191266027 1011.42080993586 49.63 2 0.07986579638955059 0.0032605969400551793 0.01484088460987677 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 132263 11522 VTVSDLQHV True PC9_epitope_Rep6 996.5240096600402 996.52290993586 55.404 2 0.07986083886918194 0.0032605969400551793 0.014842500890212312 ['ENSG00000068489|ENST00000262293|PRR11'] 59990 4204 LGIHEDSTNR True PC9_epitope_Rep1 1140.5523496662001 1140.5506949037901 21.065 3 0.07984494751362609 0.0032605969400551793 0.014847682995518622 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 78328 19686 NYISGIQTI True PC9_epitope_Rep2 1007.52876068731 1007.52817496793 81.108 1 0.07984225062937614 0.0032605969400551793 0.014848562606420094 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 6636 18650 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 77.103 2 0.07984018494324434 0.0032605969400551793 0.014849236379876334 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 40572 6953 HRGTGIAL True PC9_epitope_Rep5 823.46643521427 823.46532993586 31.713 2 0.07983941424120095 0.0032605969400551793 0.014849487770306006 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 93067 12929 RPNDIMAEV True PC9_epitope_Rep2 1043.50697969691 1043.50588993586 55.026 2 0.07983334672809235 0.0032605969400551793 0.014851467033230986 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 5230 22267 ALPEIFTEL True PC9_epitope_Rep4 1031.55391280599 1031.55337496793 93.89 1 0.07982113356675165 0.0032605969400551793 0.014855451796203484 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 77231 12658 NRVSGGLEVL True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 56.527 2 0.07981667639460246 0.0032605969400551793 0.014856906277849422 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF'] 41205 16406 HVLDDFVKV True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 68.349 2 0.07981009118415566 0.0032605969400551793 0.014859055433169583 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 111545 6660 TIAPALVSK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 32.287 2 0.07980777308230824 0.0032605969400551793 0.014859812040270981 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 17755 13159 EHSGPPIVI True PC9_epitope_Rep2 947.5076313199099 947.50652993586 55.887 2 0.07980139253881267 0.0032605969400551793 0.0148618947771888 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 35044 9326 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 40.729 2 0.0798004151084735 0.0032605969400551793 0.014862213854123408 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 121975 7949 VFTSRSAAF True NCI_RA007_Epitope_Rep4 984.5028802926398 984.50178993586 37.322 2 0.07979497374569995 0.0032605969400551793 0.014863990275283522 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 70049 11769 LVNELTEFAK True NCI_RA007_Epitope_Rep2 1162.6233893481399 1162.6228749679299 50.377 1 0.07979106637001583 0.0032605969400551793 0.014865266024084039 ['CON__P02769'] 25380 11727 FEAPSPLGA True H1975_Epitope_Rep1 887.4388830537498 887.43833496793 50.1 1 0.0797890034356843 0.0032605969400551793 0.01486593960854544 ['ENST00000477110.6_1_X:295104-295341:-|nuORF', 'nc|ENSG00000292327|Q9Y5P8-2|PPP2R3B', 'ENSG00000167393|ENST00000390665|PPP2R3B'] 68150 21683 LTDQTLIYL True PC9_epitope_Rep2 1078.5910265906998 1078.58992993586 88.88 2 0.07978864232251547 0.0032605969400551793 0.014866057521305749 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 60975 13447 LIDVGTGYY True H1975_Epitope_Rep2 999.49131254943 999.4907749679301 56.858 1 0.07978529587103078 0.0032605969400551793 0.014867150265649935 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 5229 22253 ALPEIFTEL True PC9_epitope_Rep4 1031.55391280599 1031.55280993586 93.835 2 0.07978099954309624 0.0032605969400551793 0.014868553291206805 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 96937 10345 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 50.507 2 0.07978012006419141 0.0032605969400551793 0.014868840512540879 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 140311 10929 YRDETLSGSEL True PC9_epitope_Rep4 1268.5884603913998 1268.5873699358601 49.808 2 0.07976858494013184 0.0032605969400551793 0.014872608148802612 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 107931 22225 SVVTSIFGV True PC9_epitope_Rep2 907.5014833103099 907.50038993586 90.967 2 0.07975841227248114 0.0032605969400551793 0.014875931517111933 ['ENSG00000196305|ENST00000443024|IARS1'] 130077 8710 VSDGNFSNY True H1975_Epitope_Rep2 1001.40903947745 1001.40794993586 38.463 2 0.07975215169874635 0.0032605969400551793 0.01487797716612823 ['ENSG00000183508|ENST00000369448|TENT5C'] 77449 13595 NSTFSEIFKK True PC9_epitope_Rep3 1199.6186383208699 1199.61700490379 57.355 3 0.07974761938745989 0.0032605969400551793 0.01487945826790268 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 8088 10518 ATDVNDALGY True H1975_Epitope_Rep2 1037.4665543535698 1037.46544993586 45.477 2 0.07973870483151652 0.0032605969400551793 0.014882371834306872 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 127675 10110 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 44.225 2 0.07973797333605148 0.0032605969400551793 0.014882610934489414 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 49186 4529 KEMELPAKEA True H1975_Epitope_Rep3 1144.5798102839997 1144.5781649037901 22.542 3 0.07973505012881911 0.0032605969400551793 0.014883566464188982 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 47226 20086 IVAPGTFEV True PC9_epitope_Rep5 931.5014833103099 931.50038993586 82.31 2 0.07972793902003182 0.0032605969400551793 0.014885891163064052 ['ENSG00000143621|ENST00000361891|ILF2'] 2290 12119 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 51.699 2 0.07972548483267675 0.0032605969400551793 0.014886693542517317 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 73638 20764 MWSPTHPALF True PC9_epitope_Rep3 1185.5641006502099 1185.56300993586 85.138 2 0.0797224116443186 0.0032605969400551793 0.01488769835712469 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 2050 7442 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 33.571 2 0.07972220428991747 0.0032605969400551793 0.014887766156339367 ['ENSG00000173801|ENST00000393931|JUP'] 84413 15410 QADLINELY True H1975_Epitope_Rep3 1077.53423999057 1077.53367496793 64.685 1 0.07970898823190425 0.0032605969400551793 0.014892088041948418 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 26160 14586 FHDDDNLSL True PC9_epitope_Rep1 1074.4618033263 1074.4607099358602 60.929 2 0.0797083532885875 0.0032605969400551793 0.014892295709249683 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 84378 12175 QAADLAYQL True NCI_RA007_Epitope_Rep4 991.4974605590301 991.49636993586 53.829 2 0.0797059142389948 0.0032605969400551793 0.014893093460541497 ['ENSG00000147113|ENST00000398000|DIPK2B'] 34864 23299 GQLDFSEFL True PC9_epitope_Rep5 1054.49712620586 1054.4960299358602 94.6 2 0.07970302192525132 0.0032605969400551793 0.014894039514889339 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 71775 5112 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 24.743 2 0.07969806950902526 0.0032605969400551793 0.014895659544085985 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 47262 12308 IVDEAIYY True H1975_Epitope_Rep1 984.4804135125601 984.4798649679301 52.37 1 0.07969626641343305 0.0032605969400551793 0.014896249411780492 ['ENSG00000111229|ENST00000228825|ARPC3'] 158 11149 AADPSVVNL True H1975_Epitope_Rep2 884.46034677432 884.45924993586 47.922 2 0.07969620872911497 0.0032605969400551793 0.014896268283085294 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 36699 16953 GVISKTFQL True PC9_epitope_Rep2 991.57023157647 991.56912993586 70.454 2 0.07969559439378159 0.0032605969400551793 0.01489646926300139 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 133629 21658 VYAFNLDTF True PC9_epitope_Rep4 1088.5178616504397 1088.51676993586 91.499 2 0.07968541247926288 0.0032605969400551793 0.014899800647855047 ['ENST00000562913.5_1_16:87744798-87760508:-|nuORF', 'ENST00000566349.5_1_16:87741959-87776602:-|nuORF', 'nc|ENSG00000104731|Q8TBB5-2|KLHDC4', 'nc|ENSG00000104731|Q8TBB5-3|KLHDC4', 'ENSG00000104731|ENST00000270583|KLHDC4'] 16589 9304 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39122993586 40.746 2 0.07968237315524705 0.0032605969400551793 0.014900795208748704 ['ENSG00000026025|ENST00000544301|VIM'] 43688 14844 IHDGMNLEL True PC9_epitope_Rep6 1040.49608066004 1040.49498993586 69.07 2 0.07966789189356781 0.0032605969400551793 0.014905534779241688 ['ENSG00000198258|ENST00000586895|UBL5'] 1326 14987 AEDTISILP True H1975_Epitope_Rep2 957.5018772331299 957.50078993586 62.798 2 0.07966148842306456 0.0032605969400551793 0.01490763102028318 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 132698 13390 VVHDGFEGL True PC9_epitope_Rep2 971.47124581119 971.47014993586 56.785 2 0.07965436697995586 0.0032605969400551793 0.01490996262102291 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 26161 14487 FHDDDNLSL True PC9_epitope_Rep5 1074.4618033263 1074.4607099358602 60.725 2 0.0796519606612407 0.0032605969400551793 0.014910750540526133 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 78089 9677 NVVVVDGVR True PC9_epitope_Rep1 955.5450794577898 955.5439899358599 42.079 2 0.07964810000917709 0.0032605969400551793 0.014912014745041521 ['ENSG00000138029|ENST00000317799|HADHB', 'nc|ENSG00000138029|P55084-2|HADHB', 'HADHB|p.I51L|1|0.19|ENSG00000138029|chr2:26263421-26263421|A/T|missense_variant'] 21152 10569 ERATAISL True PC9_epitope_Rep5 859.4763311916299 859.4752299358599 45.642 2 0.07964655580474633 0.0032605969400551793 0.014912520436469765 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant', 'ENST00000598459.5_1_19:39949480-39950711:+|nuORF'] 90203 3153 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 16.695 2 0.07964532584742134 0.0032605969400551793 0.014912923230683647 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 2266 7760 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 34.803 2 0.07963771425963938 0.0032605969400551793 0.014915416148167512 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 43657 20499 IHDGFGFM[Oxidation]L True PC9_epitope_Rep1 1051.4797027003501 1051.47860993586 83.661 2 0.079633290645554 0.0032605969400551793 0.014916865132173041 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 82965 21218 PSESLILFL True PC9_epitope_Rep6 1017.5746482505699 1017.57354993586 94.462 2 0.07960740766172536 0.0032605969400551793 0.014925345915500432 ['ENST00000293778.10_2_17:4636851-4637124:-|nuORF'] 71710 7837 MEEKYIVSA True H1975_Epitope_Rep3 1068.5161473982798 1068.5150499358601 35.121 2 0.07960233320302182 0.0032605969400551793 0.014927009134767792 ['ENSG00000168172|ENST00000307602|HOOK3'] 84499 21745 QALSPLLSV True PC9_epitope_Rep5 926.5436824754601 926.54258993586 88.671 2 0.07960186263407786 0.0032605969400551793 0.014927163378595171 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 64848 14028 LQDPNHLTL True PC9_epitope_Rep1 1049.55055876105 1049.54946993586 58.797 2 0.07959717911067499 0.0032605969400551793 0.014928698632562016 ['ENSG00000188997|ENST00000340067|KCTD21'] 11861 19344 DHIGALLAV True PC9_epitope_Rep2 907.51271670035 907.51160993586 79.78 2 0.07958988048807025 0.0032605969400551793 0.014931091407853897 ['ENSG00000180104|ENST00000512944|EXOC3', 'ENST00000515601.6_1_5:465213-467010:+|nuORF'] 71300 14764 LYQEIIHYF True NCI_RA007_Epitope_Rep3 1224.61791004488 1224.6168099358601 65.49 2 0.07958131511191459 0.0032605969400551793 0.014933899932532772 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 1912 10813 AEIISPPSP True H1975_Epitope_Rep2 909.48074786573 909.47964993586 46.622 2 0.0795716797967305 0.0032605969400551793 0.014937059873379385 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 39176 5942 HIDVGGHM[Oxidation]Y True H1975_Epitope_Rep2 1043.44946520123 1043.44836993586 27.838 2 0.0795684494117387 0.0032605969400551793 0.014938119431353232 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15'] 111458 11974 THTTPVLL True PC9_epitope_Rep1 880.5018176634799 880.50072993586 50.92 2 0.07955637624012399 0.0032605969400551793 0.014942080023359077 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 75421 20651 NIVNSIVGV True PC9_epitope_Rep2 913.5232813840499 913.52218993586 84.87 2 0.07955485763824516 0.0032605969400551793 0.014942578268779951 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10'] 140502 12462 YRLLPGPSA True PC9_epitope_Rep6 972.5392658013599 972.53816993586 59.361 2 0.07955373467654914 0.0032605969400551793 0.014942946716703601 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 98305 5277 SEVQSTVEA True H1975_Epitope_Rep2 948.4400052525599 948.43890993586 25.359 2 0.07955007908808126 0.0032605969400551793 0.014944146187814948 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 5905 7667 APGLPTARA True PC9_epitope_Rep3 852.4817509252399 852.48064993586 34.49 2 0.0795500290962876 0.0032605969400551793 0.014944162591738938 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 115055 15354 TRDDSPLYI True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 64.214 2 0.07954701393400475 0.0032605969400551793 0.014945151995139485 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 99729 13313 SIIDDRVIL True NCI_RA007_Epitope_Rep5 1042.60225998074 1042.60116993586 57.889 2 0.07954655212414058 0.0032605969400551793 0.01494530354007492 ['ENSG00000165475|ENST00000298248|CRYL1', 'nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'CRYL1|p.H161Tfs*15|1|0.41|ENSG00000165475|chr13:20432254-20432254|G/-|frameshift_variant'] 101317 22735 SLINVGLISV True PC9_epitope_Rep2 1013.6120963884499 1013.6115749679301 92.946 1 0.07954157013557935 0.0032605969400551793 0.014946938492950694 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 103717 5901 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 28.093 2 0.07953576794108533 0.0032605969400551793 0.014948842826054357 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 121855 16336 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 67.971 2 0.07953110465248585 0.0032605969400551793 0.014950373524446862 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 110974 10671 THANALTVM True PC9_epitope_Rep5 956.4749512926401 956.47384993586 46.035 2 0.079530972333791 0.0032605969400551793 0.014950416959458193 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 141632 15111 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.49117496793 63.278 1 0.07952896441178882 0.0032605969400551793 0.014951076095590142 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 40130 13059 HPYLPINSA True PC9_epitope_Rep5 1010.51853035678 1010.51742993586 55.237 2 0.07952648658010732 0.0032605969400551793 0.014951889525425357 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 103705 6703 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 30.754 2 0.07952570911759548 0.0032605969400551793 0.014952144761630124 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 1956 7026 AEINHSFTP True H1975_Epitope_Rep3 1014.47705946762 1014.47596993586 31.988 2 0.07952167896214259 0.0032605969400551793 0.014953467902459234 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 77116 7128 NRMLAQQAV True PC9_epitope_Rep2 1029.53894853153 1029.53784993586 32.811 2 0.07951782939482421 0.0032605969400551793 0.014954731856696782 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 112188 19882 TKFGGIVVL True PC9_epitope_Rep3 932.5695033004798 932.56840993586 81.715 2 0.07951648607049328 0.0032605969400551793 0.014955172942909191 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 120371 3659 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 19.026 2 0.07950461228077618 0.0032605969400551793 0.014959072281329573 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 39198 12976 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45884993586 55.204 2 0.07949869516166091 0.0032605969400551793 0.014961015811405494 ['ENSG00000132646|ENST00000379143|PCNA'] 78481 13217 NYNEKIYEL True PC9_epitope_Rep6 1184.5713537752797 1184.5702499358601 62.489 2 0.07949271626140869 0.0032605969400551793 0.01496297987406054 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 6064 8078 APLLQPRAA True PC9_epitope_Rep2 935.5552502186699 935.55414993586 36.431 2 0.07948751736090698 0.0032605969400551793 0.014964687903716046 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 71315 19151 LYQFNPAFF True NCI_RA007_Epitope_Rep5 1145.5545815123298 1145.5534899358602 80.535 2 0.07947253470506398 0.0032605969400551793 0.014969611276795042 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 96734 9746 SALSDLHA True PC9_epitope_Rep4 812.4028318982001 812.40172993586 45.124 2 0.07947056843330998 0.0032605969400551793 0.014970257515697444 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF'] 96657 9608 SAIQSISHV True PC9_epitope_Rep2 940.4977949122 940.49668993586 42.3 2 0.07945334484072589 0.0032605969400551793 0.014975919372949998 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 130079 14041 VSDITDPLQY True H1975_Epitope_Rep2 1149.55536935797 1149.55426993586 59.16 2 0.07945329654708481 0.0032605969400551793 0.014975935251183086 ['ENSG00000182405|ENST00000397766|PGBD4'] 121469 9973 VEYEVPEA True H1975_Epitope_Rep2 934.4283779396998 934.4278249679301 43.35 1 0.07945252494269558 0.0032605969400551793 0.014976188945401854 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 1712 9979 AEGPEVICA True H1975_Epitope_Rep3 887.4058686733099 887.40531496793 43.42 1 0.07945129524081633 0.0032605969400551793 0.014976593264863182 ['ENSG00000010292|ENST00000315579|NCAPD2'] 53374 9018 KQTDVLQQL True NCI_RA007_Epitope_Rep3 1071.59242357303 1071.5913299358601 42.567 2 0.07943667654454675 0.0032605969400551793 0.014981400597293618 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 32762 10114 GHDASQITL True PC9_epitope_Rep3 940.46140940348 940.46030993586 43.854 2 0.07943610969068414 0.0032605969400551793 0.014981587035262903 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 111056 15701 THDGSILIV True PC9_epitope_Rep5 953.51819600361 953.51708993586 65.4 2 0.07943464779132663 0.0032605969400551793 0.014982067863295088 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 126765 16536 VLPGVDALSNI True H1975_Epitope_Rep1 1096.61282466444 1096.61172993586 68.979 2 0.07942777427305868 0.0032605969400551793 0.014984328800909462 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 38084 7153 HAVGPSTSL True PC9_epitope_Rep3 867.4450310633501 867.44392993586 32.526 2 0.0794203480000157 0.0032605969400551793 0.01498677191748612 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 97524 8851 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 39.012 2 0.07941821337080666 0.0032605969400551793 0.014987474242884512 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 138379 13082 YHGEVPVSL True PC9_epitope_Rep4 999.5025459394699 999.50144993586 58.212 2 0.0794122997488021 0.0032605969400551793 0.014989420075099022 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 65324 8284 LRDEHNYTL True PC9_epitope_Rep5 1159.56218607391 1159.56055490379 36.803 3 0.079410523481406 0.0032605969400551793 0.014990004588502429 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 45439 17888 IQIMKVEEI True PC9_epitope_Rep2 1101.61038213629 1101.60928993586 74.109 2 0.07940206519675176 0.0032605969400551793 0.014992788234986346 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 96422 17725 SAAFPGASL True PC9_epitope_Rep2 819.41266830591 819.41156993586 73.461 2 0.0793943511571814 0.0032605969400551793 0.014995327369937748 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 102652 22576 SLYANIDIL True PC9_epitope_Rep1 1020.5491617787198 1020.54806993586 91.645 2 0.07939305731962165 0.0032605969400551793 0.014995753285839639 ['ENST00000510102.5_1_6:43481178-43483845:-|nuORF', 'ENST00000460903.2_1_6:43483331-43484545:-|nuORF', 'ENST00000502714.1_1_6:43481208-43483845:-|nuORF', 'ENSG00000137207|ENST00000372422|YIPF3'] 77898 22496 NVIDYIDTI True PC9_epitope_Rep5 1064.53899101784 1064.5378899358602 91.534 2 0.07937865912943363 0.0032605969400551793 0.015000493762376148 ['ENSG00000156017|ENST00000376834|CARNMT1'] 47228 18035 IVAPGTFEV True PC9_epitope_Rep6 931.5014833103099 931.50038993586 82.002 2 0.07937771688802221 0.0032605969400551793 0.015000804035890842 ['ENSG00000143621|ENST00000361891|ILF2'] 111123 16528 THEPNFTII True PC9_epitope_Rep4 1070.53965972418 1070.53856993586 71.547 2 0.07937269664424004 0.0032605969400551793 0.01500245726833379 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 2269 7856 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 35.168 2 0.07936676943557676 0.0032605969400551793 0.015004409395733886 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 114984 16166 TQYTVFHSL True PC9_epitope_Rep2 1094.53965972418 1094.53856993586 67.436 2 0.07935907119787695 0.0032605969400551793 0.015006945166726288 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 76968 6421 NREENILNR True PC9_epitope_Rep1 1156.5948831845199 1156.59322490379 29.505 3 0.07935794860770744 0.0032605969400551793 0.01500731497726982 ['PIK3CA|p.K111N|1|0.23|ENSG00000121879|chr3:179199158-179199158|G/C|missense_variant'] 59468 12529 LFQEREHVLRL True PC9_epitope_Rep4 1438.80448202794 1438.80283490379 56.011 3 0.07934991842522934 0.0032605969400551793 0.015009960577933416 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 109910 14272 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.4481749679301 60.048 1 0.07934950526813414 0.0032605969400551793 0.015010096707276514 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 96332 11259 RYSSMAASF True PC9_epitope_Rep2 1018.4542158480599 1018.45310993586 48.633 2 0.07934697407480319 0.0032605969400551793 0.015010930724429617 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 111276 12955 THLLNQDTL True PC9_epitope_Rep1 1053.54547338061 1053.54436993586 54.704 2 0.07934605002143073 0.0032605969400551793 0.015011235206785932 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 68336 15313 LTELPPLDDY True H1975_Epitope_Rep1 1174.57577044938 1174.5746699358601 64.17 2 0.0793300394496398 0.0032605969400551793 0.015016511725055371 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 124987 9312 VHVSGSPTAL True PC9_epitope_Rep5 966.51344497634 966.51234993586 40.771 2 0.07932559182247298 0.0032605969400551793 0.015017977813652515 ['ENSG00000198218|ENST00000395443|QRICH1'] 120248 4251 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 21.468 2 0.07932405209240519 0.0032605969400551793 0.015018485392054581 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 37570 19144 GVVPQLVKL True PC9_epitope_Rep2 951.6117024656298 951.61060993586 79.008 2 0.0793177205112863 0.0032605969400551793 0.015020572792743775 ['ENSG00000182481|ENST00000330459|KPNA2'] 117844 20045 TVYEGFISA True PC9_epitope_Rep5 985.4756624852898 985.47511496793 82.157 1 0.07931677260778208 0.0032605969400551793 0.015020885321684193 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 76666 10911 NQSDTSVSL True PC9_epitope_Rep5 949.43525422529 949.4347049679301 46.956 1 0.07931291123170596 0.0032605969400551793 0.015022158501250391 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 99740 21677 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.61132993586 88.208 2 0.07931158717648945 0.0032605969400551793 0.015022595094261874 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 112710 20086 TLGPVPEI True PC9_epitope_Rep3 824.4643695256 824.46382496793 82.512 1 0.07930994807296474 0.0032605969400551793 0.015023135587520579 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 114325 20901 TPQSLFILFG True H1975_Epitope_Rep1 1121.6120963884498 1121.61157496793 86.839 1 0.07930415876292811 0.0032605969400551793 0.015025044754141932 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 42826 15879 IEQEGYWLP True H1975_Epitope_Rep2 1133.53932537101 1133.53822993586 66.278 2 0.079302298802292 0.0032605969400551793 0.01502565816984471 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 36705 15351 GVISKTFQL True PC9_epitope_Rep6 991.57023157647 991.56912993586 71.18 2 0.07930108573807025 0.0032605969400551793 0.015026058251495996 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 99240 13811 SHMEPQVCL True PC9_epitope_Rep5 1042.45758697634 1042.4564899358602 58.143 2 0.07930051266732392 0.0032605969400551793 0.015026247259869521 ['ENST00000465315.1_1_2:131099412-131099547:-|nuORF', 'ENSG00000136710|ENST00000259229|CCDC115', 'nc|ENSG00000136710|Q96NT0-2|CCDC115'] 24540 4147 FAGDDAPR True NCI_RA007_Epitope_Rep2 847.38243080679 847.38132993586 20.77 2 0.07929809902867561 0.0032605969400551793 0.015027043342917006 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115211 9273 TRDSNIIRL True PC9_epitope_Rep2 1086.61455599994 1086.6134499358602 41.009 2 0.07929474168818629 0.0032605969400551793 0.01502815074987408 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS'] 17767 16232 EHSLGVLAV True PC9_epitope_Rep5 923.5076313199099 923.50652993586 67.425 2 0.07928460910818012 0.0032605969400551793 0.01503149340874577 ['ENSG00000141030|ENST00000268717|COPS3', 'nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENST00000462236.1_1_17:17171268-17179473:-|nuORF'] 116667 9144 TVAVPLVGK True NCI_RA007_Epitope_Rep2 882.5538532363399 882.55274993586 40.175 2 0.07927683155610603 0.0032605969400551793 0.015034059634204917 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 107159 20695 SVIEQIVYV True PC9_epitope_Rep4 1048.580461907 1048.57936993586 87.764 2 0.07927644710080292 0.0032605969400551793 0.015034186496958282 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 97576 7888 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 35.287 2 0.07927498597976979 0.0032605969400551793 0.015034668647544713 ['nc|ENSG00000128951|P33316-2|DUT'] 47288 17052 IVDNTTMQL True PC9_epitope_Rep3 1033.51139637101 1033.51028993586 70.744 2 0.07927167868592544 0.0032605969400551793 0.015035760064138162 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 106680 16621 STTNGGILTV True PC9_epitope_Rep3 961.50802524273 961.50692993586 69.069 2 0.0792708667962784 0.0032605969400551793 0.015036028001416159 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 93096 7807 RPNPPPVSV True PC9_epitope_Rep2 961.53451477409 961.53340993586 35.399 2 0.07927011389861785 0.0032605969400551793 0.015036276474335593 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 7223 11057 ARDDTHYLL True PC9_epitope_Rep3 1102.54072235334 1102.5396299358601 47.528 2 0.0792646596654354 0.0032605969400551793 0.015038076606925282 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 142816 17114 YYSPHGHILVL True PC9_epitope_Rep3 1297.68190728377 1297.68025490379 70.983 3 0.07926209032338094 0.0032605969400551793 0.01503892467066718 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 36033 5575 GTYVSSVPR True NCI_RA007_Epitope_Rep4 964.4977949121999 964.49668993586 28.044 2 0.07924950171751648 0.0032794174865210385 0.015043080443469524 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 1097 11547 AEALPSLAA True H1975_Epitope_Rep2 841.4545331178899 841.4539849679301 49.477 1 0.07923696355404908 0.0032794174865210385 0.015047220632057667 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 31465 5321 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.39082993586 25.543 2 0.07923123436655276 0.0032794174865210385 0.015049112804354824 ['ENSG00000131116|ENST00000300811|ZNF428'] 45340 9860 IQDDAVHTL True PC9_epitope_Rep5 1010.50327421546 1010.50216993586 42.896 2 0.07923075281298149 0.0032794174865210385 0.015049271856651156 ['ENSG00000115816|ENST00000234170|CEBPZ'] 111652 21873 TIEDGIFEV True PC9_epitope_Rep1 1021.4967918526899 1021.49627496793 88.947 1 0.07921846795295706 0.0032794174865210385 0.015053329954077434 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 140277 14840 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54290993586 65.02 2 0.07921393337715808 0.0032794174865210385 0.01505482813378874 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 75898 7665 NLQTVNVDEN True NCI_RA007_Epitope_Rep5 1144.53603089572 1144.5349299358602 36.186 2 0.07921246739349544 0.0032794174865210385 0.015055312510360446 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 77036 4376 NRISHGEVL True PC9_epitope_Rep4 1023.5461420869499 1023.54504993586 23.276 2 0.07920578996153863 0.0032794174865210385 0.015057518989250352 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 118630 18537 TYSPALNKMF True PC9_epitope_Rep1 1170.5743309807401 1170.57377496793 76.092 1 0.07918954160628608 0.0032794174865210385 0.015062889330995739 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 136819 6935 YAAQASQAL True NCI_RA007_Epitope_Rep3 921.4555957470499 921.45448993586 34.387 2 0.07918109801700218 0.0032794174865210385 0.015065680779992435 ['ENSG00000118705|ENST00000237530|RPN2', 'ENST00000462163.1_1_20:35807747-35832332:+|nuORF'] 32214 8559 GEYGDSPVP True H1975_Epitope_Rep3 919.3923267841499 919.39177496793 37.91 1 0.07918050005942755 0.0032794174865210385 0.015065878483000075 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 97736 11453 SEILGVAA True H1975_Epitope_Rep2 758.41741933318 758.4168749679301 49.108 1 0.07916392743062305 0.0032794174865210385 0.015071358865313541 ['ENSG00000123213|ENST00000380985|NLN'] 104922 17597 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.49147496793 72.695 1 0.07916225184370611 0.0032794174865210385 0.015071913066894923 ['ENSG00000113387|ENST00000265073|SUB1'] 16261 9825 EEEYPGITA True H1975_Epitope_Rep2 1007.4447562798298 1007.44364993586 42.777 2 0.07916131515706841 0.0032794174865210385 0.015072222884983283 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 9005 5317 AVGPVHNSV True PC9_epitope_Rep5 878.4610154806601 878.45990993586 25.465 2 0.07916113275707097 0.0032794174865210385 0.015072283216224686 ['ENSG00000115760|ENST00000421745|BIRC6'] 2443 11741 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.5067449679301 50.237 1 0.07916079664482108 0.0032794174865210385 0.015072394390443427 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 103714 6947 SPVFTSRSAA True PC9_epitope_Rep1 1021.51925863277 1021.51816993586 31.528 2 0.07916002112541007 0.0032794174865210385 0.015072650908164672 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 89142 10745 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.57528993586 49.087 2 0.07915706281720593 0.0032794174865210385 0.015073629462089936 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 40072 7283 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 37.151 2 0.07915515879555472 0.0032794174865210385 0.01507425930885509 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 39730 11923 HLVDEPQNLIK True PC9_epitope_Rep2 1304.7088503076 1304.7077499358602 51.185 2 0.0791549975361279 0.0032794174865210385 0.01507431265429969 ['CON__P02769'] 39296 20859 HIPDVITYL True PC9_epitope_Rep5 1069.58079626017 1069.5796899358602 85.286 2 0.07912540128923647 0.0032794174865210385 0.015084106235395432 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 76816 4509 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 24.559 2 0.07912241656693547 0.0032794174865210385 0.015085094228780006 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 14323 4277 DSYVGDEAQSK True H1975_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.424 2 0.07911408057627348 0.0032794174865210385 0.015087853902809738 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 71824 14729 MEIVDAITTTA True H1975_Epitope_Rep2 1163.57439055039 1163.5732899358602 61.817 2 0.07910503927171292 0.0032794174865210385 0.015090847608630647 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF'] 48908 15408 KEDPFVFIP True H1975_Epitope_Rep2 1090.5698972233 1090.5688099358601 64.425 2 0.0791047119964744 0.0032794174865210385 0.015090955984583331 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 132240 17213 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 71.23 2 0.07910350389762559 0.0032794174865210385 0.01509135604823434 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 117716 13851 TVVAQLKQL True PC9_epitope_Rep2 998.6124307416198 998.61132993586 58.563 2 0.07910318070964423 0.0032794174865210385 0.015091463074075715 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 28585 13426 FSGDPVYL True H1975_Epitope_Rep3 896.4279840168799 896.42743496793 56.913 1 0.07909230061183291 0.0032794174865210385 0.01509506650485466 ['ENSG00000242732|ENST00000609883|RTL5'] 107934 22463 SVVTSIFGV True PC9_epitope_Rep5 907.5014833103099 907.50038993586 91.406 2 0.07908280029990951 0.0032794174865210385 0.015098213616029555 ['ENSG00000196305|ENST00000443024|IARS1'] 17732 10706 EHQPSVLL True PC9_epitope_Rep4 921.4919812557699 921.49088993586 48.932 2 0.07908025624859474 0.0032794174865210385 0.015099056472777221 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT'] 96925 11867 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 50.665 2 0.07907834690065983 0.0032794174865210385 0.015099689078075833 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 21801 7798 ERYKEVAEL True PC9_epitope_Rep2 1135.5873381925899 1135.58569490379 35.366 3 0.07907323871422962 0.0032794174865210385 0.015101381644669157 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 90550 4995 REMEEAPVA True H1975_Epitope_Rep2 1030.4753452154598 1030.4742499358601 24.298 2 0.0790669916382094 0.0032794174865210385 0.015103451816644657 ['ENSG00000102302|ENST00000375135|FGD1'] 116459 21901 TTLPGLLTV True PC9_epitope_Rep1 913.5484335027301 913.54788496793 89.055 1 0.07906552222236475 0.0032794174865210385 0.01510393879397346 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 35221 9031 GRAPGGLSL True PC9_epitope_Rep6 826.4661008611 826.4650099358599 44.781 2 0.07906473413557473 0.0032794174865210385 0.015104199978914531 ['ENSG00000171223|ENST00000302754|JUNB'] 78666 13841 NYVQAVEEF True NCI_RA007_Epitope_Rep4 1097.5029398622898 1097.50184993586 60.496 2 0.07905824257529762 0.0032794174865210385 0.015106351549623875 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 140640 12721 YRSEEACML True PC9_epitope_Rep1 1100.4630662795998 1100.46196993586 53.804 2 0.0790560961923954 0.0032794174865210385 0.015107063012470362 ['SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion', 'nc|ENSG00000167642|O43291-2|SPINT2', 'ENSG00000167642|ENST00000301244|SPINT2', 'ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 117100 23444 TVISLLTGL True PC9_epitope_Rep5 915.56408356687 915.5635349679301 95.161 1 0.07905540052528462 0.0032794174865210385 0.015107293612396027 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 35775 14545 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 61.22 2 0.07905208445957496 0.0032794174865210385 0.01510839286802435 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 65130 21528 LQNPIIVQL True PC9_epitope_Rep5 1036.62808080576 1036.6269899358601 87.844 2 0.07903522501238404 0.0032794174865210385 0.015113982829506808 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 115114 11446 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 48.906 2 0.07902669761976085 0.0032794174865210385 0.015116810930259659 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 115056 13797 TRDDSPLYI True PC9_epitope_Rep4 1078.5294889632999 1078.52838993586 60.967 2 0.07901503619624105 0.0032794174865210385 0.015120679230313398 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 130447 15962 VSNPVDILTY True H1975_Epitope_Rep1 1119.58119018299 1119.58067496793 66.71 1 0.07901351141784677 0.0032794174865210385 0.01512118509466336 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 109295 21891 TAVPSLFSV True PC9_epitope_Rep5 919.50148331031 919.5009349679301 89.241 1 0.07901273440067008 0.0032794174865210385 0.015121442885942377 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 74596 20933 NGFPVFATV True PC9_epitope_Rep4 950.48616759934 950.48561496793 88.679 1 0.07901205159279381 0.0032794174865210385 0.01512166942475984 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 3422 19004 [Acetylation]-AGITTIEAVK True PC9_epitope_Rep3 1043.58627587973 1043.5851699358602 78.32 2 0.07900167638869007 0.0032794174865210385 0.015125112052249713 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 117997 18563 TYDRVESLF True PC9_epitope_Rep2 1128.54513902744 1128.5440499358601 76.754 2 0.07900033022091896 0.0032794174865210385 0.015125558781924536 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 30313 7722 GAAKDLPGV True PC9_epitope_Rep2 826.4548674710599 826.45376993586 35.079 2 0.07899033415981596 0.0032794174865210385 0.01512887638982693 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 77735 5742 NTNPNFVR True PC9_epitope_Rep1 960.4777281739599 960.47662993586 26.904 2 0.07898015897193182 0.0032794174865210385 0.015132254147369439 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 4735 13438 ALDFIASK True PC9_epitope_Rep1 863.47526856247 863.47416993586 56.549 2 0.07897918805110087 0.0032794174865210385 0.015132576491315492 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 44763 9250 IMDDPAGNSY True H1975_Epitope_Rep2 1081.43862535357 1081.43752993586 40.536 2 0.07897174874461316 0.0032794174865210385 0.01513504654063336 ['ENSG00000109917|ENST00000227322|ZPR1'] 7722 5041 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46070993586 24.42 2 0.07897108327995267 0.0032794174865210385 0.01513526751112524 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 27479 15746 FMDSESFYY True H1975_Epitope_Rep2 1187.44812740811 1187.4470299358602 65.738 2 0.07896872709907915 0.0032794174865210385 0.01513604991568877 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-3|INPP5F'] 14741 8976 DVNAAIATIK True NCI_RA007_Epitope_Rep3 1014.57095985246 1014.56986993586 42.404 2 0.07896404793349854 0.0032794174865210385 0.015137603813694596 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 88055 17139 QRQQLLVSL True PC9_epitope_Rep1 1083.64004247179 1083.6389499358602 70.748 2 0.07895813730579264 0.0032794174865210385 0.015139566879618939 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 134427 19523 VYPLMKEYF True PC9_epitope_Rep4 1188.5889184157197 1188.58782993586 83.214 2 0.07895029933071689 0.0032794174865210385 0.015142170432568172 ['ENSG00000100109|ENST00000407690|TFIP11'] 138417 17525 YHIDVGTQTF True PC9_epitope_Rep1 1179.5560380643099 1179.5549499358601 72.204 2 0.07893724511831528 0.0032794174865210385 0.015146507601068 ['ENSG00000118496|ENST00000237281|FBXO30'] 34505 19692 GPPGILALLD True H1975_Epitope_Rep3 964.5593325396 964.55878496793 82.473 1 0.0789344268328734 0.0032794174865210385 0.01514744410868292 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 73150 11758 MRSDTPAML True PC9_epitope_Rep3 1020.47323704048 1020.47212993586 50.248 2 0.07893430525066535 0.0032794174865210385 0.015147484511296504 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 141180 15926 YSVETVTLL True H1975_Epitope_Rep2 1023.5488274255499 1023.54772993586 66.46 2 0.07893377086053 0.0032794174865210385 0.015147662094051268 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 9365 9930 AVSDGVIKV True PC9_epitope_Rep6 886.5123823471799 886.51128993586 48.713 2 0.0789330960274495 0.0032794174865210385 0.015147886350069674 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 92184 7533 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 35.662 2 0.07891065558840663 0.0032794174865210385 0.0151553453753409 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 8209 8991 ATFPLSVQK True NCI_RA007_Epitope_Rep4 989.55458151233 989.55348993586 41.418 2 0.07890697740045867 0.0032794174865210385 0.015156568303659171 ['ENSG00000110367|ENST00000534980|DDX6'] 75427 12937 NIVPVIAKA True PC9_epitope_Rep2 923.5804023373499 923.57930993586 55.057 2 0.07889809581172223 0.0032794174865210385 0.015159521645355282 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 115058 7735 TRDEDHIAL True PC9_epitope_Rep1 1068.51998690876 1068.5188899358602 34.574 2 0.07888761128989215 0.0032794174865210385 0.01516300869346013 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 62737 11109 LLLPGELAK True NCI_RA007_Epitope_Rep5 952.5957180483199 952.59462993586 49.366 2 0.078880622351934 0.0032794174865210385 0.015165333561644864 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 117043 21602 TVIATNILL True PC9_epitope_Rep3 956.59063266788 956.58952993586 88.387 2 0.07887285564735715 0.0032794174865210385 0.015167917544727972 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 35212 10100 GRAPGGLSL True PC9_epitope_Rep2 826.4661008611 826.4650099358599 44.185 2 0.07886871463942408 0.0032794174865210385 0.015169295426597135 ['ENSG00000171223|ENST00000302754|JUNB'] 78590 21098 NYSGAAEYLYF True PC9_epitope_Rep4 1296.56626839484 1296.56567496793 89.316 1 0.0788634338197925 0.0032794174865210385 0.01517105274002148 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 38836 4871 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 24.103 2 0.07885972192384944 0.0032794174865210385 0.015172288072167087 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 97457 11635 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 49.744 1 0.07885653864009746 0.0032794174865210385 0.015173347555224176 ['ENSG00000135900|ENST00000258383|MRPL44'] 91681 15685 RIYGKFLGL True PC9_epitope_Rep4 1065.6335005393698 1065.63240993586 68.259 2 0.07884879864379908 0.0032794174865210385 0.01517592392427025 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'PPP2R5E|p.R214I|1|0.25|ENSG00000154001|chr14:63396625-63396625|C/A|missense_variant', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 91279 13029 RGLDIEGVKTV True PC9_epitope_Rep1 1185.67173652289 1185.6700949037902 54.985 3 0.07884490569774562 0.0032794174865210385 0.015177219901947724 ['ENST00000471144.1_1_20:47852594-47852858:+|nuORF', 'ENST00000484427.5_1_20:47852594-47860368:+|nuORF', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27'] 28907 10065 FTDGQQLY True H1975_Epitope_Rep3 970.43961132974 970.4390649679301 43.753 1 0.07884100403605633 0.0032794174865210385 0.015178518884936517 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 8408 15027 ATLSKIIQV True PC9_epitope_Rep4 971.6015317047498 971.60042993586 65.737 2 0.07883615434103328 0.0032794174865210385 0.015180133642260098 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 30239 14035 FYVEHPEV True PC9_epitope_Rep1 1018.4759968384599 1018.47488993586 58.823 2 0.07883357280422988 0.0032794174865210385 0.015180993257793703 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 18125 13576 EIIRQLNGV True PC9_epitope_Rep1 1040.59784330664 1040.59674993586 57.076 2 0.0788275768788213 0.0032794174865210385 0.015182989992469711 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 140427 6712 YRGGSISV True PC9_epitope_Rep2 837.43446637965 837.43336993586 31.23 2 0.07882209637595111 0.0032794174865210385 0.015184815298398005 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 45711 17221 IRPENVIIY True PC9_epitope_Rep3 1115.6338944621898 1115.63278993586 71.395 2 0.07882113602490017 0.0032794174865210385 0.01518513516872763 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 45622 12650 IRDEGISAL True PC9_epitope_Rep1 972.52400966004 972.52290993586 53.527 2 0.07881763557336334 0.0032794174865210385 0.015186301140078207 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 105776 10170 SSHFLEQTL True NCI_RA007_Epitope_Rep4 1060.5189242796 1060.5178299358602 45.977 2 0.07881643132057826 0.0032794174865210385 0.015186702286039088 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 137126 7624 YASSPGGVY True H1975_Epitope_Rep2 899.40249754503 899.40194496793 34.279 1 0.07881518686507791 0.0032794174865210385 0.01518711683424711 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 2276 7723 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.43850993586 34.69 2 0.07880457087125639 0.0032794174865210385 0.015190653623261727 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 43880 8343 IHTDSNTVL True PC9_epitope_Rep5 998.50327421546 998.50216993586 37.032 2 0.07880374236158452 0.0032794174865210385 0.015190929679171575 ['ENSG00000133243|ENST00000255608|BTBD2', 'nc|ENSG00000133243|Q9BX70-2|BTBD2', 'ENST00000589685.2_1_19:1986489-1990887:-|nuORF'] 115085 14457 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61225490379 63.519 3 0.0788003710609456 0.0032794174865210385 0.015192053030631666 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 106616 5967 STQTALTLK True NCI_RA007_Epitope_Rep4 961.54441075145 961.54330993586 29.57 2 0.07879101447827469 0.0032794174865210385 0.015195171145548485 ['ENSG00000172123|ENST00000304905|SLFN12'] 88368 20610 QSLAGGIIGV True PC9_epitope_Rep1 913.5232813840499 913.52218993586 84.093 2 0.078790509652615 0.0032794174865210385 0.015195339397533852 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 31604 6234 GEEQPPQPP True H1975_Epitope_Rep3 977.4454249861699 977.44432993586 28.993 2 0.07878695786538063 0.0032794174865210385 0.015196523212386584 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 26959 11939 FLDTNETPY True H1975_Epitope_Rep2 1098.48695544498 1098.48637496793 51.002 1 0.0787861391793166 0.0032794174865210385 0.015196796093641971 ['ENSG00000079246|ENST00000392132|XRCC5'] 107515 5100 SVNSTVLVK True NCI_RA007_Epitope_Rep3 945.5494961318899 945.54838993586 27.054 2 0.07877851257362349 0.0032794174865210385 0.01519933838435822 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML'] 21311 11508 EREQVIAAL True PC9_epitope_Rep6 1027.5662088251897 1027.5651099358602 55.345 2 0.0787733656318479 0.0032794174865210385 0.015201054316304608 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 1997 10610 AEIQGVIDA True H1975_Epitope_Rep1 914.4709114580199 914.4703649679301 45.765 1 0.07877129107708979 0.0032794174865210385 0.015201746000523363 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 25698 5463 FERLTLKHD True NCI_RA007_Epitope_Rep4 1157.61930702721 1157.61766490379 27.596 3 0.07876706560658218 0.0032794174865210385 0.015203154919749868 ['ENSG00000087086|ENST00000331825|FTL'] 22688 11658 ETQSIIFLGK True H1975_Epitope_Rep3 1134.6284747285797 1134.62736993586 49.977 2 0.07875471883256434 0.0032794174865210385 0.015207272464446133 ['CON__REFSEQ:XP_001252647', 'CON__ENSEMBL:ENSBTAP00000038329'] 54487 11407 KYHGYPYSF True PC9_epitope_Rep2 1160.52909504048 1160.5279899358602 49.199 2 0.07875228585490622 0.0032794174865210385 0.015208083964886678 ['ENSG00000102158|ENST00000618282|MAGT1', 'nc|ENSG00000104723|Q13454-2|TUSC3'] 25662 7957 FEQEMATAA True NCI_RA007_Epitope_Rep2 996.4222470134398 996.42114993586 35.582 2 0.07874118227945125 0.0032794174865210385 0.015211787988681606 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 106300 12507 STFQQMWISK True NCI_RA007_Epitope_Rep1 1254.60669373818 1254.60558993586 52.629 2 0.07873450293629883 0.0032794174865210385 0.015214016546279893 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 64040 18229 LPALAGVSA True PC9_epitope_Rep3 797.46470387877 797.4641549679301 75.331 1 0.07873312796350783 0.0032794174865210385 0.01521447534275912 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 9766 20159 AYILDTLVF True NCI_RA007_Epitope_Rep4 1053.57464825057 1053.57354993586 87.223 2 0.07873293162289231 0.0032794174865210385 0.015214540858116975 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 35733 9921 GTGIVSAPVPK True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 43.134 2 0.07868564110395192 0.0033047293732122525 0.01523032854530873 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 29327 15151 FVDEPLIHATT True PC9_epitope_Rep4 1241.6292030045697 1241.62810993586 66.205 2 0.07868004437737458 0.0033047293732122525 0.015232197995891391 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 20055 14881 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.48467496793 62.393 1 0.07867946725759532 0.0033047293732122525 0.015232390780938403 ['ENSG00000182195|ENST00000370526|LDOC1'] 689 5784 AAVADPHSL True NCI_RA007_Epitope_Rep4 879.4450310633501 879.44392993586 28.87 2 0.07867915023761114 0.0033047293732122525 0.015232496681437726 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000594962.5_1_19:17611587-17615418:+|nuORF', 'nc|ENSG00000130304|Q6PCB7-2|SLC27A1'] 105519 5224 SSAGPGLLK True NCI_RA007_Epitope_Rep5 828.4705175352 828.46942993586 26.791 2 0.0786669848647362 0.0033047293732122525 0.015236561043310577 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 122135 12103 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 51.637 1 0.07866648514912568 0.0033047293732122525 0.015236728016309313 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 72948 23091 MQAPLLIAL True PC9_epitope_Rep5 968.5728744287599 968.5723249679301 93.806 1 0.07866341716413064 0.0033047293732122525 0.015237753178181674 ['ENSG00000196743|ENST00000357164|GM2A'] 1528 6386 AEEPASVTP True H1975_Epitope_Rep2 899.42362691243 899.42307496793 29.489 1 0.07865794124379502 0.0033047293732122525 0.015239583107748915 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF', 'MIA3|p.T1568Lfs*50|1|0.04|ENSG00000154305|chr1:222658815-222658816|-/CTGTCCTTTAGGAT|frameshift_variant'] 134655 17332 VYSQIPAAVKL True PC9_epitope_Rep2 1187.6914093383098 1187.6903099358601 71.922 2 0.07865261836247175 0.0033047293732122525 0.015241362092040925 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 130978 8446 VTDMSDAEQY True H1975_Epitope_Rep2 1157.45466934053 1157.45407496793 37.439 1 0.07864916324911063 0.0033047293732122525 0.0152425169450507 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 2339 6609 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 30.373 2 0.07864211548735446 0.0033047293732122525 0.015244872875052507 ['ENSG00000172301|ENST00000302362|COPRS'] 38072 10583 HAVGDIPGV True PC9_epitope_Rep4 863.45011644379 863.44900993586 48.448 2 0.0786356347798386 0.0033047293732122525 0.015247039550274243 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 40568 4483 HRGTGIAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 23.716 2 0.07863214802272257 0.0033047293732122525 0.015248205386280706 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 22454 15959 ETEVSFLDY True H1975_Epitope_Rep2 1101.4866210918099 1101.4860749679299 66.584 1 0.07860742964605097 0.0033047293732122525 0.015256472640248054 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant'] 92285 20505 RLLDVLAPL True PC9_epitope_Rep4 1008.6331661861999 1008.63206993586 87.022 2 0.0785944350073485 0.0033047293732122525 0.015260820478904213 ['ENSG00000182871|ENST00000651438|COL18A1'] 73193 10670 MRYNEKELQAL True PC9_epitope_Rep6 1393.70238502817 1393.70074490379 51.86 3 0.07859221038506607 0.0033047293732122525 0.015261564924969344 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 3883 8681 AHAGSLTNL True PC9_epitope_Rep5 882.4559301002201 882.45482993586 38.333 2 0.07857655391022282 0.0033047293732122525 0.015266805157218358 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000484998.5_1_20:2635830-2636687:+|nuORF', 'ENST00000480992.5_1_20:2635438-2636687:+|nuORF'] 6717 8701 AQAPDLQRV True PC9_epitope_Rep5 996.5352430500799 996.53414993586 38.41 2 0.07857215148366273 0.0033047293732122525 0.015268278955191119 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 88135 4838 QRSGNVAEL True PC9_epitope_Rep4 972.4988575413598 972.49776993586 25.194 2 0.07856810320943608 0.0033047293732122525 0.015269634311161347 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 35823 6366 GTLDPVEK True PC9_epitope_Rep3 857.44944773745 857.44834993586 29.512 2 0.07856761052337276 0.0033047293732122525 0.015269799269372723 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 97573 7764 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 34.812 1 0.07855952565939664 0.0033047293732122525 0.015272506433322817 ['nc|ENSG00000128951|P33316-2|DUT'] 128950 19011 VQIGDIVTV True PC9_epitope_Rep6 942.5385970950199 942.53750993586 85.769 2 0.07855729317813646 0.0033047293732122525 0.015273254044153188 ['ENSG00000142534|ENST00000270625|RPS11'] 84770 5580 QDVDNASLAR True PC9_epitope_Rep1 1087.52580056519 1087.52470993586 26.293 2 0.07854671835104447 0.0033047293732122525 0.015276795795287887 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 44568 20522 ILPGSLFRF True PC9_epitope_Rep4 1048.60695143836 1048.60584993586 87.089 2 0.07853956963789076 0.0033047293732122525 0.015279190497532326 ['nc|ENSG00000136536|Q9H992-2|MARCHF7', 'ENSG00000136536|ENST00000409175|MARCHF7'] 60593 7905 LHHDDPEVL True PC9_epitope_Rep1 1073.51417325233 1073.5130699358601 35.233 2 0.0785344468019196 0.0033047293732122525 0.015280906779807814 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 42132 11343 IDNNIEQIS True PC9_epitope_Rep6 1044.50875351872 1044.5076499358602 54.67 2 0.07853246585515593 0.0033047293732122525 0.015281570496420024 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 9810 13759 AYLEAHETF True PC9_epitope_Rep5 1079.4923751785898 1079.4912699358601 57.946 2 0.07853106415561185 0.0033047293732122525 0.015282040152415051 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 48272 12424 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 52.652 3 0.07852876576607987 0.003324560188391744 0.015282810284187397 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 102889 9697 SPALLREA True PC9_epitope_Rep5 855.48141657207 855.48030993586 42.267 2 0.07852328357148741 0.003324560188391744 0.015284647374389903 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000572418.1_1_17:3801110-3806945:-|nuORF'] 110016 11129 TEIYGGLSA True H1975_Epitope_Rep2 909.4443623570098 909.44381496793 47.843 1 0.07851862481497288 0.003324560188391744 0.015286208691717536 ['nc|ENSG00000116885|Q8WVF1-4|OSCP1', 'nc|ENSG00000116885|Q8WVF1-2|OSCP1', 'ENSG00000116885|ENST00000235532|OSCP1', 'nc|ENSG00000116885|Q8WVF1|OSCP1'] 105086 8283 SRDTTMYAV True PC9_epitope_Rep4 1042.47534521546 1042.4742499358601 39.321 2 0.07851644378585453 0.003324560188391744 0.015286939684468879 ['ENSG00000165688|ENST00000371717|PMPCA'] 98156 9387 SESPPAELP True H1975_Epitope_Rep2 925.43927697657 925.43816993586 41.069 2 0.07850521959767792 0.003324560188391744 0.01529070209520782 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'TRIP12|p.I459*|1|0.12|ENSG00000153827|chr2:229818443-229818444|AT/-|frameshift_variant'] 128814 14045 VQAPRLAAL True PC9_epitope_Rep2 937.5709002828098 937.56980993586 59.304 2 0.07848999245245976 0.003324560188391744 0.015295807703270525 ['nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'ENSG00000033100|ENST00000035307|CHPF2'] 27508 21464 FMPPGLQEL True PC9_epitope_Rep2 1030.5157534754599 1030.51464993586 88.034 2 0.07848593247947394 0.003324560188391744 0.015297169266945649 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 54898 8656 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 38.661 3 0.07847894916257958 0.003324560188391744 0.015299511476275039 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 93010 10803 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 46.544 2 0.07847754596651689 0.003324560188391744 0.015299982149651812 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 115565 13073 TRSQPFTL True PC9_epitope_Rep1 948.5028802926399 948.50178993586 55.153 2 0.07847501173553399 0.003324560188391744 0.01530083223982098 ['ENSG00000112159|ENST00000369393|MDN1'] 122128 11660 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.4641549679301 49.839 1 0.07846970027879226 0.003324560188391744 0.015302614074304503 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 138289 7556 YHDDDNSVL True PC9_epitope_Rep4 1076.44106788172 1076.43996993586 36.439 2 0.07846816009403078 0.003324560188391744 0.015303130796387088 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 46956 22035 ITPENLPQILL True PC9_epitope_Rep4 1249.7281887698498 1249.72708993586 92.978 2 0.07846331315249389 0.003324560188391744 0.015304757020525509 ['ENSG00000015479|ENST00000394805|MATR3'] 1734 5689 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 26.913 1 0.07845806135242343 0.003324560188391744 0.015306519263322407 ['ENSG00000161847|ENST00000617231|RAVER1'] 106359 20862 STIAILNSV True PC9_epitope_Rep1 916.5229470308801 916.52239496793 85.07 1 0.07845794318229068 0.003324560188391744 0.015306558917521066 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 21341 17441 ERFLSQVL True PC9_epitope_Rep4 990.5498304850599 990.54872993586 75.08 2 0.07845634121966467 0.003324560188391744 0.015307096495522433 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1'] 103715 5677 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 27.225 2 0.07845288593935865 0.003324560188391744 0.015308256059984813 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 85003 9069 QEFVRALAA True NCI_RA007_Epitope_Rep4 1003.5450794577897 1003.5439899358599 41.716 2 0.07844973993112228 0.003324560188391744 0.015309311906622198 ['ENSG00000105372|ENST00000598742|RPS19'] 34689 16280 GQDGSVVQF True PC9_epitope_Rep5 935.4348603024699 935.43376993586 67.614 2 0.07844842653964462 0.003324560188391744 0.015309752720260425 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF', 'ENST00000511179.1_1_17:48313271-48313352:+|nuORF'] 2847 5573 AEVEGRLPA True H1975_Epitope_Rep2 940.4977949121998 940.49668993586 26.44 2 0.07844611816924921 0.003324560188391744 0.015310527507465588 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 107333 19758 SVLGAITSV True PC9_epitope_Rep4 845.48583324617 845.48528496793 84.123 1 0.07844387247285145 0.003324560188391744 0.015311281293783986 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 26090 9096 FGPGVAFR True H1975_Epitope_Rep1 849.4497225209699 849.44862993586 39.892 2 0.07842590452488231 0.003324560188391744 0.015317313631307302 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 36035 5437 GTYVSSVPR True NCI_RA007_Epitope_Rep5 964.4977949121999 964.49668993586 27.602 2 0.07841770869062654 0.003324560188391744 0.015320065937397577 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 20685 20047 EQDQSVLVL True PC9_epitope_Rep2 1029.5342399905699 1029.5331499358601 82.517 2 0.07840620861245987 0.003324560188391744 0.015323928646380788 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 26913 21046 FLDGNEMTL True PC9_epitope_Rep3 1038.46919720586 1038.46808993586 86.232 2 0.07840488562242874 0.003324560188391744 0.015324373077868164 ['ENSG00000169504|ENST00000374379|CLIC4'] 72808 17696 MPFGNVVSA True PC9_epitope_Rep6 920.4425885351999 920.44148993586 80.703 2 0.07840264558350808 0.003324560188391744 0.015325125600672982 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 84954 16296 QEELDTLFTTA True H1975_Epitope_Rep2 1266.5979624459399 1266.59686993586 67.902 2 0.07840162761139827 0.003324560188391744 0.015325467591514638 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 76779 16377 NRAATLMML True PC9_epitope_Rep4 1019.5256069665099 1019.52450993586 70.956 2 0.07838623808762453 0.003324560188391744 0.015330638618178164 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 77947 18248 NVLEIVQKV True PC9_epitope_Rep4 1040.62299542532 1040.62188993586 78.261 2 0.07838001557274327 0.003324560188391744 0.015332729905429878 ['nc|ENSG00000125247|Q5T4D3-4|TMTC4', 'nc|ENSG00000125247|Q5T4D3|TMTC4', 'ENSG00000125247|ENST00000342624|TMTC4', 'nc|ENSG00000125247|Q5T4D3-2|TMTC4', 'ENST00000462211.5_1_13:101277731-101294530:-|nuORF'] 34900 12779 GQMDPSAQI True PC9_epitope_Rep1 945.4225813666098 945.42148993586 54.028 2 0.07837771570455912 0.003324560188391744 0.015333502921649166 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000493446.1_1_7:1510215-1510538:-|nuORF'] 49399 9368 KEVDLIPKV True NCI_RA007_Epitope_Rep4 1039.62774645259 1039.62664993586 42.888 2 0.07837728103713289 0.003324560188391744 0.01533364902323235 ['nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000492914.1_1_10:51829372-51845265:+|nuORF', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C'] 36900 20234 GVLPNIQAV True PC9_epitope_Rep2 909.5283667644899 909.52781496793 83.248 1 0.07837065750781293 0.003324560188391744 0.015335875502679524 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 9489 12105 AVVPSTATV True PC9_epitope_Rep2 843.4701831820299 843.46908993586 51.871 2 0.07836570589776128 0.003324560188391744 0.01533754016886651 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 105454 11849 SRVDGVVL True PC9_epitope_Rep5 843.48141657207 843.48030993586 50.576 2 0.07836393850436943 0.003324560188391744 0.015338134384180142 ['ENSG00000134247|ENST00000393203|PTGFRN', 'ENST00000496699.1_1_1:117509714-117517097:+|nuORF'] 141804 20661 YVDDFGVSV True PC9_epitope_Rep5 999.4549270407099 999.45382993586 84.525 2 0.07835749343502715 0.003324560188391744 0.015340301463172345 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 8995 8913 AVGLVLPAK True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 40.946 2 0.07835164659634829 0.003324560188391744 0.015342267641663857 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 65026 12232 LQIPHGATV True PC9_epitope_Rep2 934.52361573722 934.52250993586 52.362 2 0.07834220286866657 0.003324560188391744 0.015345443881628052 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1'] 12022 12911 DHSGQVTIL True PC9_epitope_Rep5 968.49270953176 968.49160993586 54.674 2 0.07834184776440041 0.003324560188391744 0.015345563327000634 ['ENSG00000139668|ENST00000298125|WDFY2'] 93038 10862 RPLLKAITA True PC9_epitope_Rep5 981.63350053937 981.63240993586 46.768 2 0.07834136564858732 0.003324560188391744 0.015345725496262681 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 73124 16071 MRMLAEDEL True PC9_epitope_Rep2 1106.51001647202 1106.5089099358602 67.074 2 0.07834076510678244 0.003324560188391744 0.015345927502707482 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 6850 18890 AQGGVLPNI True PC9_epitope_Rep3 867.48141657207 867.48030993586 77.883 2 0.07833802655036508 0.003324560188391744 0.015346848712458882 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 77233 11303 NRWKQSVEL True PC9_epitope_Rep1 1158.61455599994 1158.6129149037902 48.356 3 0.07833656496584862 0.003324560188391744 0.015347340388959125 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 9979 11567 AYPHNLMTF True NCI_RA007_Epitope_Rep3 1092.50625142092 1092.5051499358601 52.628 2 0.07833225482952608 0.003324560188391744 0.01534879040297179 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 33379 19326 GLAAGGIVAV True PC9_epitope_Rep1 826.4912529797799 826.49014993586 79.143 2 0.0783313886108779 0.003324560188391744 0.015349081831288528 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 43673 10568 IHDGLTVHL True PC9_epitope_Rep6 1003.54507945779 1003.5439899358599 51.456 2 0.07832379975021753 0.003324560188391744 0.01535163522866933 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 121175 7549 VESEPAMTP True H1975_Epitope_Rep2 959.4269980407099 959.42644496793 33.989 1 0.07831956033987215 0.003324560188391744 0.015353061821048234 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000498066.1_1_2:102484451-102486985:+|nuORF'] 105976 4643 SSSSVLINK True NCI_RA007_Epitope_Rep4 933.51311062317 933.51200993586 24.276 2 0.07831797667759832 0.003324560188391744 0.015353594766692794 ['ENSG00000120278|ENST00000696526|PLEKHG1'] 126092 3783 VLENAEGAR True NCI_RA007_Epitope_Rep2 957.4879585044898 957.48686993586 19.354 2 0.07831475405476435 0.003324560188391744 0.015354679320755052 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000506477.5_1_5:137906647-137911007:-|nuORF'] 1419 8528 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 37.758 2 0.07830517992195497 0.003324560188391744 0.01535790185910715 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 19395 11851 ELLTTMGDR True PC9_epitope_Rep1 1034.5066453437398 1034.50554993586 50.45 2 0.07829720308327885 0.003324560188391744 0.015360587250067803 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 27811 8347 FQDDPHAGL True PC9_epitope_Rep6 998.4457593393398 998.44466993586 41.758 2 0.07829471613511631 0.003324560188391744 0.01536142456722158 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 138720 19721 YIPTELDQV True PC9_epitope_Rep2 1076.53899101784 1076.5378899358602 81.246 2 0.07828295531369618 0.003324560188391744 0.01536538483255299 ['ENSG00000149100|ENST00000531120|EIF3M'] 72015 6478 METAAAVAA True NCI_RA007_Epitope_Rep5 833.3953039896098 833.39475496793 31.585 1 0.07827838610950646 0.003324560188391744 0.01536692369508644 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 72802 19802 MPFGNVVSA True PC9_epitope_Rep3 920.4425885351999 920.44148993586 81.401 2 0.07827777790137787 0.003324560188391744 0.015367128544397288 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 40545 11747 HRFPTVAV True PC9_epitope_Rep1 925.5133854066898 925.5122899358599 50.058 2 0.07827726014567914 0.003324560188391744 0.01536730293062484 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 116512 18305 TTSDIDYAL True PC9_epitope_Rep1 997.46040634397 997.45930993586 75.198 2 0.07827358029251907 0.003324560188391744 0.015368542401863968 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 23760 20847 EYGNIIVTL True PC9_epitope_Rep4 1020.54916177872 1020.54806993586 88.341 2 0.07826316770195724 0.003324560188391744 0.015372050142183772 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 6193 19776 APNPVVFVA True PC9_epitope_Rep5 912.5069030439199 912.50580993586 81.113 2 0.07826018138413361 0.003324560188391744 0.015373056295727078 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 85232 6572 QEQEGGPAVP True H1975_Epitope_Rep3 1010.4668887067396 1010.46578993586 30.235 2 0.07825953017132094 0.003324560188391744 0.015373275711249981 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 89092 18955 QVPDWLHHL True PC9_epitope_Rep5 1143.58252759567 1143.5808749037901 77.934 3 0.07825622537894425 0.003324560188391744 0.015374389252185122 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 22288 6423 ETDEQRLRDEY True H1975_Epitope_Rep3 1452.6481005258397 1452.64700993586 29.684 2 0.07825355512659611 0.003324560188391744 0.015375289041612724 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 1389 7039 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4601949679301 32.0 1 0.07824983759215674 0.003324560188391744 0.015376541813473634 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 96342 7798 RYSSM[Oxidation]AASF True PC9_epitope_Rep1 1034.44913084806 1034.4480299358602 34.819 2 0.07824066539474467 0.003324560188391744 0.015379633160128645 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 99113 13644 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.4914349679301 57.338 1 0.07823884386960585 0.003324560188391744 0.015380247145997571 ['ENSG00000132646|ENST00000379143|PCNA'] 7053 9908 AQQPTAVQV True PC9_epitope_Rep3 940.4977949121998 940.49668993586 43.067 2 0.07823372445317925 0.003324560188391744 0.015381972882686383 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 118499 10939 TYQDIQNTI True NCI_RA007_Epitope_Rep2 1094.52440358286 1094.5233099358602 47.157 2 0.0782315265185952 0.003324560188391744 0.015382713853972454 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 108580 21753 SYNVTSVLF True PC9_epitope_Rep2 1028.51786165044 1028.51676993586 89.144 2 0.07823002621235477 0.003324560188391744 0.015383219658809656 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2'] 3495 12328 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep1 1042.5658747883201 1042.56537496793 52.448 1 0.07822317196242351 0.003324560188391744 0.01538553065991389 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 71328 19723 LYQHEINLF True PC9_epitope_Rep3 1175.5975089534697 1175.59640993586 81.092 2 0.07821294240337641 0.003324560188391744 0.015388980294575447 ['ENSG00000115816|ENST00000234170|CEBPZ'] 29690 21954 FVLPELPSV True PC9_epitope_Rep4 999.56408356687 999.5635749679301 92.658 1 0.07821182021777479 0.003324560188391744 0.015389358764489512 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 72785 21717 MPALGWAVA True PC9_epitope_Rep1 914.4684093602199 914.46786496793 88.367 1 0.07820827479388395 0.003324560188391744 0.015390554556349823 ['AOC1|p.P703Qfs*12|1|0.24|ENSG00000002726|chr7:150861059-150861059|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 13980 6140 DRDPASGTAL True PC9_epitope_Rep6 1001.47778774361 1001.47668993586 32.043 2 0.07820489121676846 0.003324560188391744 0.015391695841896612 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 72277 13948 MHYSPDASTAF True PC9_epitope_Rep5 1225.5073736197298 1225.50626993586 58.673 2 0.07820460273901672 0.003324560188391744 0.015391793149525946 ['ENSG00000198727|ENST00000361789|MT-CYB'] 42422 14969 IEDPLIVTP True H1975_Epitope_Rep2 995.55391280599 995.55280993586 62.73 2 0.0782023280822759 0.003324560188391744 0.015392560443581504 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 32841 11152 GHNAIINTL True PC9_epitope_Rep4 951.5137793295102 951.51268993586 50.675 2 0.0781957169969562 0.003324560188391744 0.015394790717679682 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 106775 10253 SVADTVARV True PC9_epitope_Rep1 916.4977949121999 916.49668993586 44.321 2 0.07819436123750542 0.003324560188391744 0.015395248125457789 ['ENSG00000145632|ENST00000274289|PLK2'] 120915 8798 VENSPSPLP True H1975_Epitope_Rep2 938.4709114580199 938.4703649679301 38.806 1 0.07817608805396471 0.003324560188391744 0.015401414393609515 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'ENST00000399098.5_2_21:38444584-38445304:-|nuORF', 'ENST00000329667.7_1_21:38439639-38444836:-|nuORF', 'ENST00000430792.1_1_21:38444584-38444998:-|nuORF', 'ENST00000479152.1_1_21:38441850-38444998:-|nuORF'] 92314 21560 RLLSFVVLA True PC9_epitope_Rep5 1016.63825156664 1016.63714993586 87.969 2 0.07817178678341047 0.003324560188391744 0.015402866188714398 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|159|15.39|0.31|5.63|-|0|SSR2,None|1'] 114575 16785 TQDGNIYQL True PC9_epitope_Rep2 1050.4981888350198 1050.49767496793 69.812 1 0.07816807191609683 0.003324560188391744 0.015404120159782674 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 94945 11903 RTITVGVYEA True PC9_epitope_Rep4 1107.5924235730297 1107.5913299358601 53.562 2 0.0781653026164019 0.003324560188391744 0.01540505501207919 ['ENSG00000116717|ENST00000370986|GADD45A', 'ENST00000460575.1_1_1:68151090-68151810:+|nuORF'] 14904 23013 DYATIFNNL True PC9_epitope_Rep5 1069.5080252427301 1069.50747496793 93.511 1 0.07816278468867426 0.003324560188391744 0.015405905052956331 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 120430 5195 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 25.055 2 0.07815824395040682 0.003324560188391744 0.015407438096199143 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 38045 8843 HASDRIIAL True PC9_epitope_Rep6 994.5559784946599 994.55488993586 43.948 2 0.07815541164393293 0.003324560188391744 0.015408394411189671 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 88993 20708 QVIQGLEAL True PC9_epitope_Rep1 969.5494961318898 969.54838993586 84.479 2 0.07815137074186312 0.003324560188391744 0.015409758898823848 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1', 'KLC1|p.G290Afs*11|1|0.15|ENSG00000126214|chr14:103669580-103669580|G/-|frameshift_variant'] 35963 8763 GTVDVTPFIKK True NCI_RA007_Epitope_Rep4 1203.68632395787 1203.68467490379 40.504 3 0.07814996078148197 0.003324560188391744 0.015410235025400494 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 100941 8440 SLFGSPVAK True NCI_RA007_Epitope_Rep5 904.50181766348 904.50072993586 39.144 2 0.07814167834974992 0.003324560188391744 0.015413032180020434 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 76720 16436 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53856993586 68.219 2 0.07813326720150009 0.0033515220341799852 0.015415873290473427 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 130075 11922 VSDGIIAPGY True H1975_Epitope_Rep2 990.5022115862998 990.50110993586 50.937 2 0.07812958195606053 0.0033515220341799852 0.01541711824368027 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000446622.5_1_2:216199652-216212358:+|nuORF'] 106394 8881 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.59187496793 40.824 1 0.078124694015925 0.0033515220341799852 0.015418769637310927 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 114148 11104 TPIVGQPSIPG True H1975_Epitope_Rep3 1064.5866099165999 1064.58550993586 47.805 2 0.07812125744867622 0.0033515220341799852 0.015419930782651388 ['CON__P12763'] 22268 8390 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4499749679298 37.225 1 0.07809959649430563 0.0033515220341799852 0.015427251453935016 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 28807 8389 FSVSPVVR True H1975_Epitope_Rep3 889.5021520166499 889.50104993586 37.251 2 0.07809932346440805 0.0033515220341799852 0.015427343749542678 ['ENSG00000167658|ENST00000309311|EEF2'] 28904 9926 FTDGQQLY True H1975_Epitope_Rep2 970.43961132974 970.43850993586 43.169 2 0.07809123066316588 0.0033515220341799852 0.015430079691584705 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 46701 15787 ITDVIIGFQ True H1975_Epitope_Rep1 1004.5542471591598 1004.5536749679301 66.031 1 0.07809033744800989 0.0033515220341799852 0.01543038168957271 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 65309 19341 LRDAVLLVF True PC9_epitope_Rep6 1044.6331661861998 1044.63206993586 87.043 2 0.07806952760215395 0.0033700726499267977 0.01543741910699978 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 65023 18894 LQIGDKIMQV True PC9_epitope_Rep5 1143.6321802100301 1143.63108993586 77.695 2 0.07806244758308903 0.0033700726499267977 0.015439814092301921 ['ENSG00000213977|ENST00000225525|TAX1BP3'] 118573 16488 TYQVLAVTF True NCI_RA007_Epitope_Rep3 1040.5542471591598 1040.5531499358601 72.646 2 0.07805946603602687 0.0033700726499267977 0.015440822775576407 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 40566 6899 HRGTGIAL True PC9_epitope_Rep3 823.46643521427 823.46532993586 31.552 2 0.07805384129717836 0.0033700726499267977 0.015442725841226669 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 134371 7018 VYPERSTSY True PC9_epitope_Rep5 1100.51383889916 1100.51274993586 31.964 2 0.07805049267807186 0.0033700726499267977 0.015443858912020554 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 72338 22317 MIPLLLAAL True PC9_epitope_Rep6 953.5983609006099 953.59726993586 98.813 2 0.07804736466509864 0.0033700726499267977 0.015444917406577028 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 85886 19055 QHFDTIYSIL True PC9_epitope_Rep6 1235.6186383208699 1235.61754993586 85.939 2 0.07804574600088542 0.0033700726499267977 0.01544546517620377 ['ENSG00000010292|ENST00000315579|NCAPD2'] 17279 15938 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 66.451 2 0.07803917200606625 0.0033700726499267977 0.015447690058069629 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 3107 9459 AGAGHFEVV True PC9_epitope_Rep4 885.43446637965 885.43336993586 43.993 2 0.07803916253241515 0.0033700726499267977 0.015447693264517972 ['ENSG00000169018|ENST00000306917|FEM1B'] 11873 14901 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52760993586 65.258 2 0.07803767773583367 0.0033700726499267977 0.015448195815889415 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 35841 4707 GTLNQPLTK True NCI_RA007_Epitope_Rep5 970.54474510462 970.54364993586 24.791 2 0.07803582776026807 0.0033700726499267977 0.015448821988862346 ['ENSG00000103671|ENST00000261884|TRIP4'] 17763 18284 EHSIATLLL True PC9_epitope_Rep6 995.56514619603 995.56404993586 82.973 2 0.07802563979500958 0.0033700726499267977 0.01545227079902127 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 108053 18173 SYAELGTTI True PC9_epitope_Rep2 953.47057710485 953.46948993586 75.205 2 0.07802544958064161 0.0033700726499267977 0.015452335196858262 ['ENSG00000151012|ENST00000280612|SLC7A11'] 115054 14479 TRDDSPLYI True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 60.962 2 0.07802540964519111 0.0033700726499267977 0.015452348717197013 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 26049 10667 FGIDRPAEL True H1975_Epitope_Rep1 1016.5290950404799 1016.52798993586 45.989 2 0.07802460304517105 0.0033700726499267977 0.015452621797877255 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 86736 21399 QLLDLDPEV True PC9_epitope_Rep2 1040.5389910178399 1040.5378899358602 87.783 2 0.07802324628551023 0.0033700726499267977 0.015453081149532623 ['ENSG00000113384|ENST00000265070|GOLPH3'] 104353 17232 SQISDTSVVL True PC9_epitope_Rep4 1047.5448046742702 1047.54427496793 74.291 1 0.07802264829468523 0.0033700726499267977 0.015453283612488043 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 6242 8392 APQEATLGA True PC9_epitope_Rep1 856.4290466460399 856.4284949679301 37.116 1 0.07801931154248873 0.0033700726499267977 0.015454413388879928 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 98176 8214 SESVTEITA True H1975_Epitope_Rep2 935.44475627983 935.4442049679301 36.548 1 0.0780150071304143 0.0033700726499267977 0.015455870914991645 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 32568 8252 GGGQIIPTAR True PC9_epitope_Rep3 968.5403284305199 968.53922993586 36.717 2 0.0780146261109797 0.0033700726499267977 0.015455999938978098 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 27131 21819 FLITILDHL True PC9_epitope_Rep4 1083.63283183303 1083.6317299358602 92.122 2 0.07801045301181737 0.0033700726499267977 0.015457413134569751 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1', 'ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 29687 22665 FVLPELPSV True PC9_epitope_Rep2 999.56408356687 999.5635749679301 92.677 1 0.07801039041267521 0.0033700726499267977 0.01545743433432158 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 109140 8969 TAMDAQEAL True NCI_RA007_Epitope_Rep4 948.4222470134399 948.42114993586 41.336 2 0.07801027760414125 0.0033700726499267977 0.015457472537995533 ['ENST00000433877.6_1_12:122990076-123005058:-|nuORF', 'nc|ENSG00000111011|Q7L4I2-2|RSRC2', 'ENSG00000111011|ENST00000331738|RSRC2'] 76997 7608 NRGPAYGL True PC9_epitope_Rep2 846.4348007328199 846.43370993586 34.636 2 0.07800793431520943 0.0033700726499267977 0.015458266134840163 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENST00000592923.5_1_19:11649661-11650145:+|nuORF', 'ENST00000588468.1_1_19:11649742-11652758:+|nuORF', 'ENSG00000130176|ENST00000252456|CNN1'] 68363 14401 LTEPTGLLY True H1975_Epitope_Rep2 1005.5382627418498 1005.53716993586 60.543 2 0.0780077305077871 0.0033700726499267977 0.015458335159680077 ['ENSG00000168758|ENST00000305476|SEMA4C'] 17404 9056 EHDPRVITV True PC9_epitope_Rep3 1064.56145779792 1064.56036993586 39.776 2 0.07799969561513825 0.0033700726499267977 0.015461056620636791 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 108350 21826 SYLDSIHFF True PC9_epitope_Rep2 1127.52876068731 1127.52766993586 89.428 2 0.07799962906418124 0.0033700726499267977 0.015461079163669473 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 2425 10939 AEQFSSLTP True H1975_Epitope_Rep1 978.4658260775799 978.46472993586 47.04 2 0.07799497137115981 0.0033700726499267977 0.01546265695619452 ['ENST00000366535.3_1_1:244615028-244615205:-|nuORF'] 60528 9905 LHDINAQL True PC9_epitope_Rep4 922.4872302285 922.48612993586 45.751 2 0.07799487877657167 0.0033700726499267977 0.015462688324116484 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 74750 8270 NHAPSVQI True PC9_epitope_Rep5 864.44536541652 864.44426993586 36.753 2 0.07798736608270175 0.0033700726499267977 0.015465233569381433 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 90605 13799 REMIPFAVV True NCI_RA007_Epitope_Rep3 1060.57393705792 1060.57282993586 61.604 2 0.07798605351638045 0.0033700726499267977 0.015465678297331283 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 140276 17113 YRAPEVLL True PC9_epitope_Rep3 959.5440168286299 959.54290993586 70.979 2 0.0779774115363503 0.0033700726499267977 0.015468606699147106 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 111304 13292 THMPSVVGV True PC9_epitope_Rep5 925.4691376362099 925.46804993586 56.139 2 0.07796701716248343 0.0033700726499267977 0.015472129599378248 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 8794 10168 AVDPTSGQLY True H1975_Epitope_Rep1 1049.50293986229 1049.50184993586 44.051 2 0.07796603297588996 0.0033700726499267977 0.015472463202435604 ['ENSG00000132182|ENST00000254508|NUP210', 'NUP210|p.K1258R|1|0.07|ENSG00000132182|chr3:13335524-13335524|T/C|missense_variant'] 71285 13648 LYQDGVFKF True NCI_RA007_Epitope_Rep5 1115.56514619603 1115.56404993586 59.18 2 0.07795573545171881 0.0033700726499267977 0.015475954087374134 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 35831 11351 GTLEQWIEK True NCI_RA007_Epitope_Rep3 1102.56587447202 1102.56476993586 51.762 2 0.07795298917675174 0.0033700726499267977 0.015476885205322493 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 77130 9458 NRNELAETL True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 43.989 2 0.07794086451850508 0.0033700726499267977 0.015480996667239046 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1'] 132331 21233 VTYPGELLL True PC9_epitope_Rep4 1003.5589981864299 1003.55790993586 89.836 2 0.07793968659291953 0.0033700726499267977 0.015481396155235073 ['ENSG00000146386|ENST00000367660|ABRACL'] 24872 16422 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.49657496793 71.129 1 0.07793777848557054 0.0033700726499267977 0.015482043301422097 ['ENSG00000204592|ENST00000376630|HLA-E'] 18411 21073 EIVTTIPTI True PC9_epitope_Rep5 985.56956287013 985.56901496793 86.118 1 0.07793706330634602 0.0033700726499267977 0.015482285865306969 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 97308 10319 SEALPSDIAA True H1975_Epitope_Rep2 972.47639076128 972.47584496793 44.7 1 0.07793425281375327 0.0033700726499267977 0.015483239120899418 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 81774 18319 PLPLPPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 75.478 2 0.07793186678092316 0.0033700726499267977 0.01548404845236147 ['nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENST00000217964.11_1_X:9433148-9621615:+|nuORF'] 32219 8860 GEYGGWYKA True NCI_RA007_Epitope_Rep5 1029.45559574705 1029.45448993586 40.745 2 0.0779315933578821 0.0033700726499267977 0.015484141198734641 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 4326 21476 AIISELVSI True PC9_epitope_Rep4 943.5589981864299 943.5584449679301 90.798 1 0.07792374671141718 0.0033700726499267977 0.015486803039029332 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 27803 20162 FQDDNNLYL True PC9_epitope_Rep5 1140.50875351872 1140.5076499358602 82.601 2 0.07791207637089143 0.0033700726499267977 0.015490762792638243 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 35308 18618 GRLPSSWAL True PC9_epitope_Rep3 985.53451477409 985.53340993586 76.836 2 0.07788590786286995 0.0033700726499267977 0.01549964522141772 ['ENSG00000129636|ENST00000320640|ITFG1'] 115476 15804 TRNDYVMMY True PC9_epitope_Rep5 1191.50526544475 1191.50416993586 65.78 2 0.07788481932026636 0.0033700726499267977 0.015500014810647588 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 35222 9106 GRAPGGLSL True PC9_epitope_Rep6 826.4661008611 826.4650099358599 45.116 2 0.07788022551248235 0.0033700726499267977 0.015501574621517838 ['ENSG00000171223|ENST00000302754|JUNB'] 4333 6140 AIITPPPAK True NCI_RA007_Epitope_Rep4 906.5538532363399 906.55274993586 30.23 2 0.07787967193348719 0.0033700726499267977 0.015501762597168334 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 9290 9685 AVQEFGLARFK True NCI_RA007_Epitope_Rep5 1264.6928063206399 1264.69117490379 43.89 3 0.07787925294243828 0.0033700726499267977 0.015501904872975994 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 85426 12556 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45471496793 53.341 1 0.07787524374491818 0.0033700726499267977 0.015503266328449897 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 63261 10291 LLSNDEVTIK True PC9_epitope_Rep6 1130.6183039677 1130.61720993586 50.272 2 0.07786770353598803 0.0033700726499267977 0.015505827158064008 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 121935 16982 VFSGLVSTGLK True PC9_epitope_Rep3 1106.63356010902 1106.6324699358602 70.481 2 0.07786040825125098 0.0033700726499267977 0.015508305181810334 ['ENSG00000167658|ENST00000309311|EEF2'] 132462 14533 VVDEIFNEY True H1975_Epitope_Rep1 1126.51825557326 1126.51767496793 61.107 1 0.07785519338743566 0.0033700726499267977 0.015510076765888689 ['ENSG00000100220|ENST00000216038|RTCB'] 34730 5117 GQEDHYNNL True PC9_epitope_Rep6 1088.45230127176 1088.45120993586 27.366 2 0.07784551203690565 0.0033700726499267977 0.01551336619796233 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 87610 10286 QQPQPLPPP True PC9_epitope_Rep2 1000.5341804209198 1000.53308993586 44.896 2 0.07784537074163202 0.0033700726499267977 0.015513414210675794 ['nc|ENSG00000204540|Q9UIG5-2|PSORS1C1', 'ENSG00000204540|ENST00000259881|PSORS1C1'] 113221 11216 TLQLDNNFEVK True NCI_RA007_Epitope_Rep2 1319.6721304457103 1319.6710299358601 48.213 2 0.07783868982349604 0.0033700726499267977 0.015515684572499399 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 99149 12837 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 57.243 2 0.07783250858443395 0.0033700726499267977 0.015517785405868045 ['ENSG00000132646|ENST00000379143|PCNA'] 115423 19699 TRLPTPVLL True PC9_epitope_Rep1 1008.6331661861999 1008.63206993586 80.598 2 0.07782724160626744 0.0033700726499267977 0.015519575716716805 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 106596 8054 STPLAGLAPK True NCI_RA007_Epitope_Rep3 953.55458151233 953.55348993586 38.766 2 0.07781633598115613 0.0033700726499267977 0.015523283286518122 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 55211 9930 LADALQELR True NCI_RA007_Epitope_Rep5 1027.56620882519 1027.5651099358602 44.839 2 0.07781274437483449 0.0033700726499267977 0.015524504500871377 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 38061 11831 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.44900993586 50.373 2 0.07780949199158489 0.0033700726499267977 0.015525610450357998 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 75804 20782 NLNPEFISV True PC9_epitope_Rep2 1031.5287606873098 1031.52817496793 85.38 1 0.07780800763794515 0.0033700726499267977 0.01552611521857223 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 11850 14009 DHHENKYLLL True PC9_epitope_Rep3 1280.65133543148 1280.6496749037901 58.967 3 0.0778040715282375 0.0033700726499267977 0.015527453803377908 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 131637 5050 VTLTSEEEAR True H1975_Epitope_Rep1 1133.5564319871298 1133.55532993586 24.496 2 0.07780156071415531 0.0033700726499267977 0.015528307732629204 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 46627 7467 ITDHLDTQY True H1975_Epitope_Rep2 1104.5087535187201 1104.5076499358602 33.669 2 0.0777948005213917 0.0033700726499267977 0.01553060709594317 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 89455 17956 QYESKVFYL True PC9_epitope_Rep2 1175.5862755634298 1175.5851699358602 74.373 2 0.0777878536566192 0.0033700726499267977 0.015532970283824925 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 139540 15675 YLTDRVMTV True PC9_epitope_Rep2 1096.5586809166 1096.55758993586 65.571 2 0.0777832046525491 0.0033700726499267977 0.015534551971902564 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3'] 11974 10340 DHNVSSVAI True PC9_epitope_Rep3 940.46140940348 940.46030993586 44.717 2 0.07776970331668355 0.0033700726499267977 0.015539146260568534 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 89650 9522 QYTQALEKF True NCI_RA007_Epitope_Rep5 1126.5658744720197 1126.56476993586 43.262 2 0.07776706364774746 0.0033700726499267977 0.015540044645985837 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 119763 8953 VAYLQAHAL True NCI_RA007_Epitope_Rep3 984.5392658013599 984.53816993586 42.31 2 0.07775988576104588 0.0033700726499267977 0.015542487814587825 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 4172 16054 AHTTVIIDL True PC9_epitope_Rep4 981.5494961318899 981.54838993586 69.687 2 0.07775884274954778 0.0033700726499267977 0.015542842858810291 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 6998 21761 AQLPSLLSV True PC9_epitope_Rep5 926.5436824754601 926.5431349679301 88.733 1 0.07774930551170024 0.0033700726499267977 0.015546089714314742 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1'] 120162 3503 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 18.323 2 0.0777427892040051 0.0033700726499267977 0.015548308489160006 ['ENSG00000155506|ENST00000518297|LARP1'] 95125 5967 RVFDVPIRR True NCI_RA007_Epitope_Rep3 1156.68291034328 1156.68127490379 30.452 3 0.07773956075911215 0.0033700726499267977 0.015549407870367566 ['ENSG00000110429|ENST00000265651|FBXO3'] 7264 15308 ARDFTVSAL True PC9_epitope_Rep1 978.5134449763399 978.51234993586 63.703 2 0.07771587527158781 0.0033700726499267977 0.015557475701474735 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 64 12926 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 54.833 1 0.07770998557898745 0.0033700726499267977 0.015559482475375357 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 88126 8676 QRSDGPYAL True PC9_epitope_Rep2 1005.4879585044899 1005.48686993586 38.738 2 0.07768466691284381 0.0033700726499267977 0.01556811196754928 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 107855 15267 SVVGQIAKL True PC9_epitope_Rep2 913.5596668927699 913.55856993586 64.001 2 0.0776804401534292 0.0033700726499267977 0.015569553031149838 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 112793 23829 TLIEDILGV True PC9_epitope_Rep2 971.5539128059899 971.55280993586 97.129 2 0.0776693341676421 0.0033700726499267977 0.015573340079260593 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 71256 17241 LYPQFMFHL True NCI_RA007_Epitope_Rep4 1194.5895871220598 1194.58848993586 74.649 2 0.07766698369462242 0.0033700726499267977 0.015574141681153425 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 96751 19635 SAMEVVPAL True PC9_epitope_Rep4 915.4735543103099 915.47300496793 83.642 1 0.07766427219813679 0.0033700726499267977 0.015575066453825866 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 74267 5423 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.5074749679301 25.918 1 0.07765278752250557 0.0033700726499267977 0.015578983942185905 ['ENSG00000167658|ENST00000309311|EEF2'] 110045 6041 TELDAKTVTA True H1975_Epitope_Rep3 1047.54480467427 1047.54370993586 28.251 2 0.07764703656024567 0.0033700726499267977 0.015580945973939789 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF'] 60945 12750 LIDEVIEDTRY True H1975_Epitope_Rep2 1364.6823607762399 1364.6812699358602 54.146 2 0.07764688905111608 0.0033700726499267977 0.015580996302047973 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 131122 10711 VTEEPQRLFY True H1975_Epitope_Rep3 1280.64010204144 1280.63900993586 46.277 2 0.07763885301864336 0.0033700726499267977 0.015583738316417978 ['nc|ENSG00000104081|Q96LC9-3|BMF', 'nc|ENSG00000104081|Q96LC9-2|BMF', 'ENSG00000104081|ENST00000354670|BMF'] 2277 7818 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.43850993586 35.052 2 0.07762895016530383 0.0033700726499267977 0.015587117937760893 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 120654 7665 VEILANDQGNR True PC9_epitope_Rep1 1227.6207635791898 1227.6191249037902 34.306 3 0.07762417353240084 0.0033700726499267977 0.015588748339918865 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 109304 12387 TAVTVNQSL True PC9_epitope_Rep3 931.4974605590301 931.49636993586 52.677 2 0.07762387807039299 0.0033700726499267977 0.015588849194827637 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 132200 17407 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 71.756 2 0.07762256812741315 0.0033700726499267977 0.015589296346558314 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 111888 15458 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 64.28 2 0.077611716544536 0.0033700726499267977 0.015593001017290038 ['ENSG00000213719|ENST00000375784|CLIC1'] 50050 8320 KKFENEIIL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64810993586 39.844 2 0.07760809131984421 0.0033700726499267977 0.015594238832251854 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 105141 9073 SRFLNKQPY True PC9_epitope_Rep1 1151.60874234351 1151.60710490379 39.751 3 0.07758238167907032 0.0033700726499267977 0.015603019894448138 ['ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENST00000484855.2_1_20:44526619-44527086:+|nuORF'] 21332 13274 ERFEKTFQL True PC9_epitope_Rep2 1196.6189726740397 1196.61733490379 56.336 3 0.07758088452766498 0.0033700726499267977 0.015603531384924603 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 78680 9879 NYYEQWGK True PC9_epitope_Rep6 1086.47705946762 1086.4759699358601 48.494 2 0.07756901015000024 0.0033700726499267977 0.015607588730988928 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 127661 10301 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 44.61 1 0.07756546215973172 0.0033700726499267977 0.015608801231918906 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 4302 23452 AIIEYMPLL True PC9_epitope_Rep5 1061.5831047592899 1061.58257496793 95.193 1 0.07756525795944534 0.0033700726499267977 0.015608871018619267 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 111045 16976 THDGGFLSL True PC9_epitope_Rep4 945.45559574705 945.45448993586 73.288 2 0.07756308295548422 0.0033700726499267977 0.015609614357641962 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 84836 9006 QEAISVVA True H1975_Epitope_Rep2 815.4388830537499 815.43833496793 39.594 1 0.07755520100729997 0.003388056412516527 0.015612308404234412 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B'] 11843 5810 DHHENKYLL True PC9_epitope_Rep4 1167.56727145435 1167.56563490379 29.206 3 0.07754794794696306 0.003388056412516527 0.01561478788078734 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 49415 9863 KEVFLAQPV True NCI_RA007_Epitope_Rep4 1029.5858816406096 1029.58478993586 44.785 2 0.07752414700473408 0.003388056412516527 0.015622926874677066 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 72889 11332 MPSSVPLRA True PC9_epitope_Rep3 956.5113368013599 956.51022993586 48.594 2 0.077523852517655 0.003388056412516527 0.015623027602575314 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 54623 6529 KYLEERAMRQF True NCI_RA007_Epitope_Rep3 1469.74491854649 1469.74327490379 32.724 3 0.07751893116287832 0.003388056412516527 0.015624711018203853 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 108340 19550 SYLDNFIKI True PC9_epitope_Rep6 1111.59136094387 1111.59026993586 87.862 2 0.07751416027980526 0.003388056412516527 0.01562634312463449 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 15305 13097 EAFNMIDQNR True PC9_epitope_Rep1 1236.5557207944798 1236.55462993586 55.247 2 0.07750116682478426 0.003388056412516527 0.015630788958231594 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 90626 8487 RENPNLVMPP True H1975_Epitope_Rep3 1165.5913780272099 1165.59028993586 37.631 2 0.07749438115844662 0.003388056412516527 0.015633111207577162 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 105305 15534 SRNEALIAL True PC9_epitope_Rep5 985.5556441414899 985.55454993586 64.762 2 0.07748568381523556 0.003388056412516527 0.015636088158528846 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000120756|ENST00000457734|PLS1'] 120620 11075 VEIAYSDVA True H1975_Epitope_Rep2 965.4705771048499 965.47002496793 47.632 1 0.07747683790465698 0.003388056412516527 0.01563911650444207 ['ENSG00000169504|ENST00000374379|CLIC4'] 111049 15795 THDGSILIV True PC9_epitope_Rep1 953.51819600361 953.51708993586 65.568 2 0.07747355683022596 0.003388056412516527 0.015640239900362403 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 47222 20100 IVAPGTFEV True PC9_epitope_Rep3 931.5014833103099 931.5009349679301 82.566 1 0.07746975798121152 0.003388056412516527 0.015641540669474912 ['ENSG00000143621|ENST00000361891|ILF2'] 52858 15716 KPEEQWWNA True PC9_epitope_Rep1 1186.5407223533398 1186.5396299358601 65.274 2 0.07746792037328878 0.003388056412516527 0.01564216992357467 ['ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 47344 13200 IVGDQISF True H1975_Epitope_Rep3 877.45453311789 877.4539849679301 56.027 1 0.07746180764094 0.003388056412516527 0.015644263283304 ['ENSG00000084207|ENST00000398606|GSTP1', 'GSTP1|p.K189Pfs*13|1|0.3|ENSG00000084207|chr11:67586505-67586506|-/CC|frameshift_variant', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF'] 140738 14614 YSDDIPHAL True PC9_epitope_Rep1 1029.47672511445 1029.47562993586 61.036 2 0.0774583031518604 0.003388056412516527 0.015645463544813002 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 115225 12831 TRDVVHLDL True PC9_epitope_Rep2 1066.5771078620598 1066.5760099358602 54.657 2 0.0774503969630099 0.003388056412516527 0.0156481716716088 ['ENSG00000164543|ENST00000319357|STK17A'] 98035 5519 SEQISTAGTEA True H1975_Epitope_Rep3 1092.4934973774 1092.49240993586 26.276 2 0.07744800660781244 0.003388056412516527 0.01564899053215586 ['ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000532107.2_1_14:51374946-51378571:-|nuORF'] 90547 4654 REMDQTMAA True NCI_RA007_Epitope_Rep4 1051.44266518819 1051.4415699358601 24.32 2 0.07744652533307557 0.003388056412516527 0.015649497990391784 ['ENST00000371870.3_1_1:47799617-47838812:+|nuORF', 'nc|ENSG00000162368|P30085|CMPK1', 'ENSG00000162368|ENST00000371873|CMPK1'] 84940 14002 QEEGYIIAV True H1975_Epitope_Rep2 1020.5127762699998 1020.51227496793 59.007 1 0.07742740055464199 0.003388056412516527 0.01565605117727193 ['nc|ENSG00000155903|Q15283|RASA2', 'ENSG00000155903|ENST00000286364|RASA2'] 114589 12068 TQDGTPITV True PC9_epitope_Rep4 930.4658260775799 930.46472993586 54.226 2 0.07741917501987326 0.003388056412516527 0.015658870479645717 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 115567 13023 TRSQPFTL True PC9_epitope_Rep5 948.5028802926399 948.50178993586 55.098 2 0.0774177161832227 0.003388056412516527 0.015659370545448616 ['ENSG00000112159|ENST00000369393|MDN1'] 109021 21586 TAIDILTTV True PC9_epitope_Rep2 945.5382627418501 945.53716993586 88.502 2 0.0774144568708023 0.003388056412516527 0.01566048783932862 ['ENSG00000198700|ENST00000361565|IPO9'] 103234 9217 SPLFSQHTA True PC9_epitope_Rep1 986.48214484806 986.48104993586 40.305 2 0.07740874970136485 0.003388056412516527 0.015662444439038033 ['ENSG00000167721|ENST00000301364|TSR1'] 115662 14943 TRYIAPTIL True PC9_epitope_Rep6 1046.6124307416198 1046.61132993586 69.483 2 0.07740733319184859 0.003388056412516527 0.015662930099028083 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 93103 7585 RPNPPPVSV True PC9_epitope_Rep4 961.53451477409 961.53340993586 36.556 2 0.07739890196630297 0.003388056412516527 0.015665821093342934 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 85121 20152 QELLYVVPFVA True H1975_Epitope_Rep3 1276.70672504928 1276.70562993586 84.304 2 0.07739811629147175 0.003388056412516527 0.015666090519818814 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 108407 22865 SYLLPGMASF True PC9_epitope_Rep5 1084.52631815916 1084.5252299358601 92.948 2 0.07739673346074658 0.003388056412516527 0.015666564735676763 ['ENSG00000168310|ENST00000393593|IRF2', 'nc|ENSG00000168310|P14316-2|IRF2'] 119358 13806 VAPEEHPVLL True PC9_epitope_Rep2 1102.60225998074 1102.60116993586 58.389 2 0.07738853494513463 0.003388056412516527 0.01566937653807548 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 87979 14618 QRMTTQLLL True PC9_epitope_Rep6 1102.6168644990598 1102.61576993586 68.143 2 0.07738566497113913 0.003388056412516527 0.01567036094949981 ['ENSG00000110195|ENST00000393676|FOLR1'] 6524 7208 APTGDLPRA True PC9_epitope_Rep5 896.4715801643599 896.47048993586 32.69 2 0.07738199670557022 0.003388056412516527 0.015671619261867217 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 26916 20184 FLDGNEMTL True PC9_epitope_Rep4 1038.46919720586 1038.46808993586 85.775 2 0.07737649490145954 0.003388056412516527 0.015673506703407815 ['ENSG00000169504|ENST00000374379|CLIC4'] 25425 6210 FEDNQDVSA True H1975_Epitope_Rep3 1023.4145187807098 1023.4134299358601 28.899 2 0.07737512332206156 0.003388056412516527 0.01567397726864128 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 95281 11100 RVPKTLVLV True PC9_epitope_Rep6 1023.6804507317898 1023.6793499358599 53.623 2 0.07736259902365072 0.003388056412516527 0.015678274749490885 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 93454 3204 RQHNTEIRM True NCI_RA007_Epitope_Rep2 1183.5880239822698 1183.58638490379 17.11 3 0.07735640657247564 0.003388056412516527 0.015680399980679438 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15'] 7721 4950 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46070993586 24.078 2 0.07733178839992075 0.003388056412516527 0.01568885152569038 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 54949 10518 KYQDAPAAQF True PC9_epitope_Rep5 1137.5454733806098 1137.54436993586 45.445 2 0.07733013851808432 0.003388056412516527 0.015689418090608444 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.L175Wfs*55|1|0.48|ENSG00000079999|chr19:10499511-10499511|G/-|frameshift_variant', 'KEAP1|p.F280Sfs*29|1|0.14|ENSG00000079999|chr19:10492039-10492063|CACTTCTGCAGCTGCATCTGCAGGA/-|frameshift_variant', 'KEAP1|p.K323*|1|0.28|ENSG00000079999|chr19:10491935-10491936|-/A|frameshift_variant', 'KEAP1|p.V420Sfs*38|1|0.56|ENSG00000079999|chr19:10491644-10491644|C/-|frameshift_variant', 'KEAP1|p.V123Rfs*31|1|0.28|ENSG00000079999|chr19:10499658-10499667|CAATGGACAC/-|frameshift_variant'] 1838 11429 AEIDASNIV True H1975_Epitope_Rep2 930.46582607758 930.46472993586 49.014 2 0.0773289036257839 0.003388056412516527 0.015689842161750123 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 35000 7258 GQTGVIRSV True PC9_epitope_Rep3 915.5137793295099 915.51268993586 32.927 2 0.07729923860425586 0.003388056412516527 0.01570003256569135 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 96516 10990 SADPNVVDL True H1975_Epitope_Rep1 928.45017601344 928.44962496793 47.237 1 0.07729191945476276 0.003388056412516527 0.015702547759289493 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 109721 3297 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 17.324 2 0.07728411906932182 0.003388056412516527 0.015705228741533867 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 104507 20753 SQMPTVIYV True PC9_epitope_Rep5 1036.5263181591597 1036.5252299358601 84.878 2 0.07728170152115202 0.003388056412516527 0.015706059736395984 ['ENSG00000121931|ENST00000369763|LRIF1'] 102660 19743 SLYGGTITI True PC9_epitope_Rep4 923.49639792987 923.4958449679301 84.065 1 0.07726816611467667 0.003388056412516527 0.015710713081629458 ['ENSG00000155827|ENST00000389120|RNF20', 'RNF20|p.Q440Sfs*14|1|0.08|ENSG00000155827|chr9:101551726-101551727|-/T|frameshift_variant'] 84965 9037 QEEPDLVSA True H1975_Epitope_Rep2 986.4556553166999 986.45454993586 39.714 2 0.0772666376784856 0.003388056412516527 0.015711238624447985 ['ENSG00000143643|ENST00000366661|TTC13'] 2341 6794 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 31.088 2 0.07724827318312553 0.003388056412516527 0.015717554419615733 ['ENSG00000172301|ENST00000302362|COPRS'] 103706 6799 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 31.123 2 0.07723603324829743 0.003388056412516527 0.015721765212637278 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 120246 4056 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 20.73 2 0.07723075548538663 0.003388056412516527 0.015723581198094087 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 135149 11522 WELGQVHPP True H1975_Epitope_Rep2 1061.52942939365 1061.52832993586 49.377 2 0.07722973628746953 0.003388056412516527 0.01572393190873807 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 37574 19496 GVVPQLVKL True PC9_epitope_Rep5 951.6117024656298 951.61060993586 80.044 2 0.07721805962540101 0.003388056412516527 0.01572795042234942 ['ENSG00000182481|ENST00000330459|KPNA2'] 121374 6174 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51731496793 28.817 1 0.07721222215753638 0.003388056412516527 0.015729959741464076 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 48966 5587 KEERPPELP True H1975_Epitope_Rep2 1093.5767735088898 1093.57566993586 26.492 2 0.07720379984301562 0.003388056412516527 0.015732859214769496 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 137582 4974 YEEPPQKPP True H1975_Epitope_Rep3 1083.5236753068698 1083.52256993586 24.26 2 0.07720322042618068 0.003388056412516527 0.015733058703649744 ['ENSG00000064999|ENST00000360359|ANKS1A'] 108125 17509 SYDPDFNQL True PC9_epitope_Rep6 1097.46655435357 1097.46597496793 79.979 1 0.0772023783284688 0.003388056412516527 0.015733348635799102 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 39170 11220 HIDPNFASL True NCI_RA007_Epitope_Rep5 1012.4977949122 1012.49668993586 49.793 2 0.07720127331248777 0.003388056412516527 0.015733729097620337 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 116307 10004 TTDVDSLSY True H1975_Epitope_Rep1 999.43967089939 999.4390749679301 43.416 1 0.07719116152773789 0.003388056412516527 0.01573721102804013 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'nc|ENSG00000183597|Q6ICL3-6|TANGO2'] 31686 19324 GEFTFLLPA True H1975_Epitope_Rep2 993.5171333744498 993.51658496793 80.202 1 0.0771887866050252 0.003388056412516527 0.01573802892224594 ['ENSG00000099203|ENST00000214869|TMED1'] 6637 18739 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 77.457 2 0.0771848762863475 0.003388056412516527 0.015739375674397628 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 108368 11425 SYLENVDHF True NCI_RA007_Epitope_Rep4 1122.49818883502 1122.49708993586 50.868 2 0.07717438176750803 0.003388056412516527 0.01574299062146464 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 6881 20246 AQIDQYVGL True PC9_epitope_Rep5 1005.5131106231698 1005.51200993586 82.925 2 0.07716797350089087 0.003388056412516527 0.01574519839713944 ['nc|ENSG00000125744|O75298-2|RTN2', 'ENSG00000125744|ENST00000245923|RTN2', 'ENST00000591789.1_1_19:45989311-45991830:-|nuORF', 'ENST00000593187.5_1_19:45988968-45991824:-|nuORF', 'ENST00000593129.1_1_19:45988968-45992276:-|nuORF', 'nc|ENSG00000125744|O75298-3|RTN2'] 29342 20403 FVDFNDPNF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 86.627 2 0.07716155444136479 0.003388056412516527 0.015747410180878225 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 40120 18396 HPYLFPVAA True PC9_epitope_Rep2 1013.5334521449298 1013.53234993586 76.091 2 0.07715937591158435 0.003388056412516527 0.015748160892062706 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 102999 16871 SPFGTITSA True PC9_epitope_Rep5 879.43379767331 879.43270993586 69.905 2 0.07715463658115407 0.003388056412516527 0.01574979415855657 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 70195 21244 LVQDLLTQV True PC9_epitope_Rep3 1027.5913609438699 1027.59026993586 87.008 2 0.07715251751742282 0.003388056412516527 0.015750524480746136 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66099749-66102792:-|nuORF'] 35992 8388 GTVVTGTLER True PC9_epitope_Rep1 1031.56112344475 1031.56002993586 37.101 2 0.07715246504528402 0.003388056412516527 0.015750542565344756 ['ENSG00000178952|ENST00000313511|TUFM'] 62325 5991 LLGESAVGK True H1975_Epitope_Rep3 872.4967322830399 872.49562993586 28.057 2 0.07715227798221137 0.003388056412516527 0.01575060703706131 ['nc|ENSG00000144566|P20339-2|RAB5A', 'ENSG00000144566|ENST00000273047|RAB5A', 'ENSG00000108774|ENST00000346213|RAB5C', 'nc|ENSG00000108774|P51148-2|RAB5C', 'ENST00000476544.1_1_3:19992384-19992582:+|nuORF', 'ENST00000550013.1_1_17:40282343-40282577:-|nuORF', 'ENST00000546810.1_1_12:56367874-56383936:+|nuORF', 'nc|ENSG00000111540|P61020-2|RAB5B', 'ENSG00000111540|ENST00000360299|RAB5B'] 8895 10608 AVFPSIVGR True NCI_RA007_Epitope_Rep3 944.5443511817999 944.54324993586 48.777 2 0.07714759430345532 0.003388056412516527 0.01575222135796179 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 107516 5266 SVNSTVLVK True NCI_RA007_Epitope_Rep5 945.5494961318899 945.54838993586 26.952 2 0.07713407688581383 0.003388056412516527 0.015756881264597556 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML'] 45279 19716 IPVSGITVV True PC9_epitope_Rep2 883.53786881903 883.53676993586 81.226 2 0.0771205195068623 0.003388056412516527 0.01576155623943948 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 27860 17680 FQDPSVTQL True PC9_epitope_Rep4 1033.50802524273 1033.5069299358602 76.03 2 0.07710137955179193 0.003388056412516527 0.015768158451107864 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 97249 4501 SEADPSGVA True H1975_Epitope_Rep3 831.36102665587 831.36047496793 22.434 1 0.07710081627814312 0.003388056412516527 0.01576835278803287 ['ENSG00000184990|ENST00000329967|SIVA1'] 110063 8495 TELISTTA True H1975_Epitope_Rep3 834.43346332014 834.4329149679301 37.661 1 0.07709903894821794 0.003388056412516527 0.01576896600522691 ['ENSG00000113141|ENST00000417647|IK'] 105258 20805 SRLDSVLLL True PC9_epitope_Rep3 1014.6073453611799 1014.60624993586 85.298 2 0.07709022025228994 0.003388056412516527 0.015772008974878744 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 103861 7318 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 35.477 2 0.0770794060335659 0.003388056412516527 0.015775741265483034 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 97839 11905 SELPGAFEA True H1975_Epitope_Rep3 919.4287122928699 919.42816496793 50.945 1 0.07706508448725999 0.003388056412516527 0.015780685301877987 ['ENSG00000126247|ENST00000246533|CAPNS1'] 99845 19846 SILGKFAVV True PC9_epitope_Rep2 932.5695033004798 932.56840993586 81.729 2 0.07706460858498985 0.003388056412516527 0.015780849616090015 ['ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 8541 3568 ATTTVMNPK True NCI_RA007_Epitope_Rep4 961.4902670036099 961.48916993586 19.746 2 0.07706220433873219 0.003388056412516527 0.015781679751749832 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46306285-46312915:-|nuORF', 'ENST00000475170.5_1_21:46306285-46313576:-|nuORF', 'ENST00000479202.5_1_21:46306285-46309037:-|nuORF'] 88271 10774 QSEIASM[Oxidation]LY True H1975_Epitope_Rep2 1056.47976227 1056.4786699358601 46.472 2 0.07705988474508134 0.003388056412516527 0.015782480697268668 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 134081 18178 VYKPVSIYL True PC9_epitope_Rep2 1080.6219327961599 1080.62082993586 75.227 2 0.07705856456486966 0.003388056412516527 0.015782936566646484 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 5093 16236 ALLGDLTKA True PC9_epitope_Rep1 900.52803241132 900.52692993586 67.269 2 0.07705703374250253 0.003388056412516527 0.015783465187924686 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 118933 15686 VADPYVVIM True NCI_RA007_Epitope_Rep5 1005.5205045027299 1005.51997496793 67.052 1 0.0770550552675854 0.003388056412516527 0.01578414841638419 ['ENSG00000071894|ENST00000616140|CPSF1'] 2629 7510 AESDHMAIP True H1975_Epitope_Rep2 969.42258136661 969.42148993586 33.837 2 0.07704951866256496 0.003388056412516527 0.015786060523684253 ['ENSG00000160294|ENST00000291688|MCM3AP'] 87731 12149 QRALLANAL True PC9_epitope_Rep6 968.5767139392399 968.57560993586 58.084 2 0.07704830247329161 0.003388056412516527 0.015786480572556997 ['ENSG00000109133|ENST00000504986|TMEM33'] 127660 10207 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 44.25 1 0.07704339994124727 0.003388056412516527 0.01578817392056982 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 55104 8181 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 36.408 2 0.07703299405538146 0.003388056412516527 0.015791768703796845 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 93003 11180 RPKPSSSPVIF True PC9_epitope_Rep3 1213.68190728377 1213.68025490379 48.009 3 0.07703224493201039 0.003388056412516527 0.01579202752297068 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 137759 2747 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 14.601 2 0.0770305045408677 0.003388056412516527 0.0157926288365355 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 128365 14549 VPRAAFLSP True PC9_epitope_Rep5 956.5443511817999 956.54324993586 60.962 2 0.07702946749011542 0.003388056412516527 0.0157929871527492 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 107161 19537 SVIEQIVYV True PC9_epitope_Rep6 1048.580461907 1048.57936993586 87.813 2 0.07702802414613096 0.003388056412516527 0.015793485861848047 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 52838 11376 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 49.078 2 0.07702718155136014 0.003388056412516527 0.015793777004838642 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 110192 5980 TEQEVAQVA True H1975_Epitope_Rep3 973.4716397340098 973.47054993586 28.013 2 0.0770207874403861 0.003388056412516527 0.015795986534468905 ['ENSG00000196878|ENST00000356082|LAMB3'] 141585 7370 YTQKSLSLSPG True NCI_RA007_Epitope_Rep4 1179.6135529404298 1179.61244993586 34.989 2 0.07700369607741454 0.003388056412516527 0.015801893990129733 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1'] 35700 15421 GTFATLSELH True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 67.248 2 0.0769980621416578 0.003388056412516527 0.015803841754423616 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 96193 9633 RYPDSHQLF True PC9_epitope_Rep6 1161.55670677065 1161.5550749037902 47.397 3 0.07699451142864266 0.003388056412516527 0.01580506942202579 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 6306 5590 APRLQSEVA True PC9_epitope_Rep4 969.5243440132099 969.52324993586 28.285 2 0.07698701638804573 0.003388056412516527 0.01580766114259489 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 73456 15354 MVAPAVASV True PC9_epitope_Rep2 843.4524249429099 843.45132993586 64.342 2 0.07698470413603552 0.003388056412516527 0.01580846077948895 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 6267 15778 APRDAYWIA True PC9_epitope_Rep5 1061.52942939365 1061.52832993586 65.683 2 0.07698055707660573 0.003388056412516527 0.01580989503507054 ['ENSG00000151465|ENST00000281141|CDC123'] 75429 13802 NIVPVIAKA True PC9_epitope_Rep3 923.5804023373499 923.57930993586 58.166 2 0.07697925534425198 0.003388056412516527 0.01581034526269746 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 128043 9843 VPKNSDPWAA True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 42.722 2 0.07697648945615121 0.003388056412516527 0.015811301934728995 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 137084 18770 YAQGLLTGV True PC9_epitope_Rep4 920.4967322830399 920.49562993586 80.281 2 0.07696973396027716 0.003388056412516527 0.01581363876897424 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 1775 17195 AEGWMDWAA True H1975_Epitope_Rep1 1035.4120166829098 1035.41147496793 71.596 1 0.07696871142993944 0.003388056412516527 0.015813992506678413 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1'] 100195 23720 SIVDFLITA True PC9_epitope_Rep5 977.5433481222899 977.54224993586 96.22 2 0.07696498028144845 0.003388056412516527 0.01581528333579912 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 86071 11850 QHSISYTL True PC9_epitope_Rep1 947.47124581119 947.47014993586 50.446 2 0.07696447072815354 0.003388056412516527 0.01581545962862189 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3', 'ENSG00000139946|ENST00000267460|PELI2', 'ENSG00000197329|ENST00000358912|PELI1'] 104969 8296 SRDHGLEVL True PC9_epitope_Rep4 1024.53015766964 1024.5290699358602 39.37 2 0.07695901120788647 0.003388056412516527 0.015817348602521614 ['ENSG00000168101|ENST00000304301|NUDT16L1'] 59007 6016 LEVLSGER True H1975_Epitope_Rep3 901.4868958753299 901.48578993586 28.153 2 0.07695900391246412 0.003388056412516527 0.0158173511268517 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 5662 5348 APAEEPAAAAA True PC9_epitope_Rep6 967.4610750503098 967.45996993586 28.425 2 0.07695423188673792 0.00340893470790378 0.015819002402837228 ['ENSG00000277443|ENST00000612661|MARCKS'] 101418 17021 SLKPSIETL True PC9_epitope_Rep1 986.56481184286 986.56370993586 70.295 2 0.0769541722110766 0.00340893470790378 0.015819023053573706 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 132757 10478 VVINYSIVK True NCI_RA007_Epitope_Rep2 1033.6171817688898 1033.6160899358601 45.351 2 0.0769523100415081 0.00340893470790378 0.015819667469176558 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 140664 14778 YRTEFTTAL True PC9_epitope_Rep2 1100.55022440788 1100.54912993586 62.107 2 0.07693342268220009 0.00340893470790378 0.015826204944044034 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 97945 10316 SENPSVYVP True H1975_Epitope_Rep1 990.4658260775799 990.4652749679301 44.628 1 0.07692208485354593 0.00340893470790378 0.015830130513236864 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 11103 4932 DC[Carbamidomethyl]VGPEVEK True NCI_RA007_Epitope_Rep2 1031.4593610775798 1031.45826993586 23.805 2 0.07691730657317887 0.00340893470790378 0.01583178520002812 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 97398 7186 SEDVAKIVA True H1975_Epitope_Rep2 930.5022115862998 930.50110993586 32.575 2 0.07691529661751924 0.00340893470790378 0.015832481282555596 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF', 'ENST00000477693.1_1_2:122488402-122494426:-|nuORF', 'ENSG00000155438|ENST00000285814|NIFK'] 118056 22145 TYFSTPLLL True PC9_epitope_Rep4 1053.57464825057 1053.5740749679298 93.398 1 0.07691067014094237 0.00340893470790378 0.01583408362019621 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 28411 10572 FRYTAGTPY True PC9_epitope_Rep6 1074.5134449763398 1074.5123499358601 51.473 2 0.07690923754637087 0.00340893470790378 0.015834579816837703 ['FAM168A|p.Y158Mfs*54|1|0.08|ENSG00000054965|chr11:73409638-73409638|C/-|frameshift_variant', 'ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 35228 14929 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.58544993586 62.685 2 0.07689111520277511 0.00340893470790378 0.015840857964741183 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 109326 19210 TAYDNFVEL True PC9_epitope_Rep6 1070.49204082542 1070.49094993586 86.543 2 0.07688388140778188 0.00340893470790378 0.015843364626549495 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 99228 12332 SHLVATVTV True PC9_epitope_Rep5 925.52328138405 925.52218993586 52.428 2 0.07688317247393765 0.00340893470790378 0.01584361030691799 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 41831 19791 IAVNAVLTV True PC9_epitope_Rep4 898.5487678559 898.54766993586 84.252 2 0.07687972944755905 0.00340893470790378 0.015844803535077955 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 34674 19193 GQDGLYIGV True PC9_epitope_Rep4 920.4603467743199 920.4597949679301 81.925 1 0.07687960698247999 0.00340893470790378 0.015844845978580033 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 114788 10773 TQLGDLHTC True PC9_epitope_Rep5 986.44913046762 986.44802993586 46.43 2 0.07686921658971081 0.00340893470790378 0.01584844742945765 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 103523 14171 SPRPPLISV True PC9_epitope_Rep2 964.57056592964 964.56946993586 59.777 2 0.07686631958734794 0.00340893470790378 0.015849451705863684 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 12609 10189 DLAGSIIGK True H1975_Epitope_Rep3 872.4967322830399 872.49562993586 44.237 2 0.0768438539572313 0.00340893470790378 0.01585724166902068 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 90168 5308 REDKPPLAV True H1975_Epitope_Rep2 1023.5712942056298 1023.57018993586 25.468 2 0.07683958830316381 0.00340893470790378 0.015858721189139988 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1', 'ENST00000512807.1_1_3:129278266-129279214:-|nuORF'] 87154 18697 QPFGDHIISV True PC9_epitope_Rep1 1111.56620882519 1111.5651099358602 76.709 2 0.07683276687969234 0.00340893470790378 0.015861087432345426 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 134242 7221 VYMNRVKEI True PC9_epitope_Rep4 1150.6168644990598 1150.61521490379 35.08 3 0.07681227057870524 0.00340893470790378 0.01586819925470404 ['ENSG00000197223|ENST00000410067|C1D', 'ENST00000455013.2_1_10:81784495-81784867:-|nuORF'] 124487 7570 VGVNGFGR True PC9_epitope_Rep2 804.4242360491198 804.42312993586 34.488 2 0.07681154822131386 0.00340893470790378 0.015868449953091567 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 13377 7115 DLYDAGVK True H1975_Epitope_Rep3 879.43379767331 879.43270993586 32.338 2 0.07680334879031014 0.00340893470790378 0.015871295872937938 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 24584 17206 FAIDPHLLL True H1975_Epitope_Rep2 1037.59096702105 1037.5898699358602 71.473 2 0.07680278236943881 0.00340893470790378 0.01587149248811238 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 125049 8602 VIDPVAPRY True H1975_Epitope_Rep1 1028.5654805492 1028.5643899358602 38.016 2 0.07679617915948433 0.00340893470790378 0.01587378475223173 ['ENSG00000136628|ENST00000366923|EPRS1'] 107933 22430 SVVTSIFGV True PC9_epitope_Rep3 907.5014833103099 907.50038993586 91.553 2 0.07679487412989972 0.00340893470790378 0.01587423782185351 ['ENSG00000196305|ENST00000443024|IARS1'] 1221 8076 AEDDLNTVAA True H1975_Epitope_Rep3 1017.46146897313 1017.4608749679301 36.038 1 0.0767894108005896 0.00340893470790378 0.01587613466732676 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 29373 8257 FVDMGHSAY True H1975_Epitope_Rep3 1025.42766674705 1025.42656993586 36.746 2 0.07678095184308235 0.00340893470790378 0.015879071999736906 ['ENSG00000170606|ENST00000304858|HSPA4', 'HSPA4|p.K697Nfs*6|1|0.33|ENSG00000170606|chr5:133101809-133101809|A/-|frameshift_variant'] 129252 12662 VQVDGKIGL True PC9_epitope_Rep2 927.5389314481899 927.53782993586 54.011 2 0.0767703049645853 0.00340893470790378 0.01588276979783638 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 139957 22042 YQDELTALL True PC9_epitope_Rep2 1064.5389910178399 1064.53847496793 90.256 1 0.07676664416610302 0.00340893470790378 0.015884041425899404 ['ENSG00000129474|ENST00000262713|AJUBA'] 14347 4811 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 23.874 2 0.07676141925997361 0.00340893470790378 0.015885856532505068 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 86024 14438 QHQESIIQL True PC9_epitope_Rep2 1094.5720224816198 1094.57092993586 60.803 2 0.07676094204179713 0.00340893470790378 0.015886022325387463 ['ENSG00000084112|ENST00000326495|SSH1', 'nc|ENSG00000084112|Q8WYL5-4|SSH1'] 37504 20200 GVVDIFQTV True PC9_epitope_Rep6 976.52294703088 976.52184993586 90.371 2 0.07675825690264057 0.00340893470790378 0.0158869552138289 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 88841 5840 QVASTLKQV True PC9_epitope_Rep4 972.5603951687598 972.55928993586 29.329 2 0.07674618910961764 0.00340893470790378 0.015891148515646478 ['ENSG00000166295|ENST00000299381|ANAPC16'] 91745 8550 RKFDEVVSL True NCI_RA007_Epitope_Rep3 1091.59750895347 1091.59640993586 40.702 2 0.07674393217896978 0.00340893470790378 0.015891932865714633 ['ENSG00000197563|ENST00000640252|PIGN'] 84209 20874 PYLDSFYEY True PC9_epitope_Rep4 1195.5073565363898 1195.50677496793 88.447 1 0.07673828874849503 0.00340893470790378 0.015893894282558323 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 96890 13922 SATQVYTIL True H1975_Epitope_Rep2 994.53351171458 994.5329649679301 58.698 1 0.0767230391671252 0.00340893470790378 0.01589919551923013 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000481241.1_1_3:180491477-180491675:-|nuORF'] 2097 10150 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 44.041 1 0.07672099528490765 0.00340893470790378 0.015899906162648286 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 47600 6818 IVVVTAGVR True NCI_RA007_Epitope_Rep3 912.5756513100798 912.57454993586 33.926 2 0.07672050463026113 0.00340893470790378 0.015900076764215138 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 48508 14431 KAINVFVSA True PC9_epitope_Rep1 947.54401682863 947.54290993586 60.332 2 0.07671859809612276 0.00340893470790378 0.01590073968601992 ['ENSG00000114209|ENST00000392750|PDCD10'] 87433 15947 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.46262993586 66.329 2 0.07670784986593385 0.00340893470790378 0.01590447744015848 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 103966 16925 SQANRLFYL True PC9_epitope_Rep6 1110.5821932425 1110.58108993586 77.642 2 0.07670446929644287 0.00340893470790378 0.015905653220570262 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 39246 15625 HIIENIVAV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 72.304 2 0.07668990042708769 0.00340893470790378 0.01591072128008092 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 98909 14954 SHADLAGVPL True PC9_epitope_Rep2 978.5134449763399 978.51234993586 62.78 2 0.07668937950088524 0.00340893470790378 0.01591090252210083 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 127682 10492 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 45.297 2 0.07668403807181191 0.00340893470790378 0.015912761037320238 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 88127 9720 QRSDGPYAL True PC9_epitope_Rep3 1005.4879585044899 1005.48686993586 42.341 2 0.07668271167208068 0.00340893470790378 0.015913222580792714 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 17669 19476 EHLQLISL True PC9_epitope_Rep2 951.5389314481899 951.53782993586 80.294 2 0.07667910262563464 0.00340893470790378 0.01591447847344184 ['ENSG00000163918|ENST00000296273|RFC4'] 77991 20839 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 85.603 2 0.07663801793811546 0.00340893470790378 0.015928781830807523 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 6526 5613 APTGDLPRA True PC9_epitope_Rep6 896.4715801643599 896.47048993586 29.663 2 0.07662295165394978 0.00340893470790378 0.015934030060270905 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 110147 8488 TENSFVVSS True H1975_Epitope_Rep2 968.445090633 968.44454496793 37.601 1 0.07660730532535584 0.00340893470790378 0.015939482051049645 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 77896 22437 NVIDYIDTI True PC9_epitope_Rep3 1064.53899101784 1064.5378899358602 91.579 2 0.07660338347496143 0.00340893470790378 0.015940848899416483 ['ENSG00000156017|ENST00000376834|CARNMT1'] 50059 7434 KKFLKPYTL True NCI_RA007_Epitope_Rep2 1136.69576644276 1136.69413490379 33.543 3 0.07659717983403752 0.00340893470790378 0.01594301122359385 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 101322 22908 SLINVGLISV True PC9_epitope_Rep5 1013.6120963884499 1013.6115749679301 93.108 1 0.0765928039148991 0.00340893470790378 0.01594453664658045 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 136807 17897 YAADIVFL True H1975_Epitope_Rep2 910.48001958974 910.4794749679301 74.162 1 0.07659280136222257 0.00340893470790378 0.015944537536470123 ['ENSG00000114270|ENST00000681320|COL7A1', 'nc|ENSG00000114270|Q02388-2|COL7A1'] 133825 7676 VYGDVQRV True PC9_epitope_Rep1 934.4872302284999 934.48612993586 34.347 2 0.07659123246207837 0.00340893470790378 0.015945084480199007 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 126307 20799 VLIENVASL True PC9_epitope_Rep5 956.5542471591599 956.55314993586 85.052 2 0.0765899273276459 0.00340893470790378 0.01594553948430712 ['ENSG00000176153|ENST00000389614|GPX2'] 27991 19683 FQLEHIM[Oxidation]DL True PC9_epitope_Rep1 1160.5535959166 1160.5524899358602 80.535 2 0.07658917418065193 0.00340893470790378 0.015945802056620918 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 88873 17410 QVDSSFLSLY True H1975_Epitope_Rep2 1157.5604547384098 1157.5593499358602 72.26 2 0.07658026407305839 0.00340893470790378 0.01594890872517055 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'nc|ENSG00000170632|Q8N2F6-4|ARMC10', 'nc|ENSG00000170632|Q8N2F6-3|ARMC10'] 118667 10942 TYSTEPNNL True PC9_epitope_Rep3 1037.46655435357 1037.46544993586 47.071 2 0.0765788130277274 0.00340893470790378 0.015949414711553686 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 6194 19788 APNPVVFVA True PC9_epitope_Rep5 912.5069030439199 912.5063549679301 81.16 1 0.07657670350645385 0.00340893470790378 0.015950150338322068 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 108224 23140 SYIALPLTL True PC9_epitope_Rep1 989.57973363101 989.57918496793 93.8 1 0.07657118345900486 0.00340893470790378 0.015952075424641093 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 76580 8106 NQLIRTSGV True PC9_epitope_Rep4 986.55089311422 986.54978993586 38.633 2 0.0765671023181655 0.00340893470790378 0.015953498839484406 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 88560 10257 QTDHLFFKY True H1975_Epitope_Rep2 1197.5818588893299 1197.58021490379 44.459 3 0.07655151833258027 0.00340893470790378 0.01595893529096892 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 40565 6932 HRGTGIAL True PC9_epitope_Rep1 823.46643521427 823.46532993586 31.47 2 0.07654393722739701 0.00340893470790378 0.015961580573493832 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 76768 6696 NQWDGTQHGV True PC9_epitope_Rep6 1140.49483479008 1140.49372993586 34.513 2 0.07653691076453757 0.00340893470790378 0.01596403268925448 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 120919 10950 VENSYSISV True H1975_Epitope_Rep2 996.47639076128 996.47528993586 47.15 2 0.07653332506972524 0.00340893470790378 0.015965284171000675 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 110589 15223 TFSDVEAHF True PC9_epitope_Rep4 1051.46107505031 1051.45996993586 66.483 2 0.07652851365267505 0.00340893470790378 0.01596696359894617 ['ENSG00000056277|ENST00000370978|ZNF280C'] 2655 7654 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 34.395 2 0.07652134134393761 0.00340893470790378 0.01596946740337159 ['ENSG00000038219|ENST00000040738|BOD1L1'] 97390 9884 SEDSPPPLP True H1975_Epitope_Rep2 937.4392769765699 937.43872496793 43.007 1 0.07650906739745468 0.00340893470790378 0.01597375300445324 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12'] 77083 16086 NRLETPMEL True PC9_epitope_Rep5 1101.54884450889 1101.54774993586 66.863 2 0.07650372595654042 0.00340893470790378 0.015975618369902085 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'ENST00000460333.5_1_1:12359354-12409038:+|nuORF'] 35975 21072 GTVEQIVYL True PC9_epitope_Rep5 1020.5491617787197 1020.54806993586 86.114 2 0.07650005934308476 0.00340893470790378 0.015976898961078248 ['ENSG00000182481|ENST00000330459|KPNA2'] 85920 11842 QHGGFVVTV True PC9_epitope_Rep6 942.4923156089399 942.49120993586 56.757 2 0.07649500201346643 0.00340893470790378 0.015978665426973297 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 142902 21847 YYVDFFKTL True PC9_epitope_Rep5 1194.5961119711399 1194.5950099358602 89.068 2 0.07647889562138165 0.0034196919541487703 0.015984292414490262 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 35237 15878 GRAPQVLVL True PC9_epitope_Rep5 951.5865503469499 951.58544993586 66.067 2 0.07646316564427792 0.0034196919541487703 0.015989789679850097 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 106560 5592 STMGYM[Oxidation]MAK True NCI_RA007_Epitope_Rep4 1034.42351034718 1034.42240993586 28.109 2 0.07645973050323988 0.0034196919541487703 0.01599099041718711 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 133854 14112 VYGPLPQSF True NCI_RA007_Epitope_Rep4 1006.5123823471798 1006.51187496793 61.562 1 0.07643657308439294 0.0034196919541487703 0.015999087177874127 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 47710 21607 IYAPPLPSL True PC9_epitope_Rep3 969.55351888317 969.55242993586 88.408 2 0.07643523980136904 0.0034196919541487703 0.01599955346336037 ['ENSG00000121057|ENST00000337714|AKAP1'] 45329 5117 IQASTM[Oxidation]AFK True H1975_Epitope_Rep3 1011.50591744819 1011.50480993586 24.792 2 0.07642837372356875 0.0034196919541487703 0.016001954918948815 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.Q89H|1|0.32|ENSG00000158710|chr1:159919749-159919749|C/G|missense_variant'] 62710 17546 LLLNNDNLLR True PC9_epitope_Rep4 1196.6877209401998 1196.68662993586 75.507 2 0.07642803423911888 0.0034196919541487703 0.01600207366457359 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 6399 5383 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 28.581 2 0.07642047368351544 0.0034196919541487703 0.016004718425426667 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 134799 19141 VYTVVDEM[Oxidation]F True PC9_epitope_Rep4 1117.50016336141 1117.49906993586 81.721 2 0.076418336254002 0.0034196919541487703 0.016005466194363323 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 4129 9717 AHSPLAAQL True PC9_epitope_Rep4 906.4923156089401 906.49120993586 45.014 2 0.07641725502507883 0.0034196919541487703 0.016005844469257263 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 34857 23368 GQLDFSEFL True PC9_epitope_Rep1 1054.49712620586 1054.49657496793 94.664 1 0.07641578965409158 0.0034196919541487703 0.016006357152028406 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 47358 13897 IVGPVVGL True H1975_Epitope_Rep2 752.4796256669199 752.47907496793 58.599 1 0.07641414713935758 0.0034196919541487703 0.016006931829488143 ['ENSG00000152348|ENST00000282185|ATG10'] 97413 11424 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43872496793 48.994 1 0.07641324396459415 0.0034196919541487703 0.016007247837395565 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 35071 7820 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42828993586 39.473 2 0.07640364576385193 0.0034196919541487703 0.016010606469709306 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 104097 21120 SQDYPTLAF True PC9_epitope_Rep3 1040.48147614172 1040.48097496793 86.521 1 0.07639852662765349 0.0034196919541487703 0.01601239804247387 ['ENSG00000134697|ENST00000373062|GNL2'] 40450 15960 HRDDELYIL True PC9_epitope_Rep2 1172.5825871653199 1172.5814899358602 66.642 2 0.07639227403408289 0.0034196919541487703 0.01601458655125711 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 41404 18427 HYGLPVVV True PC9_epitope_Rep1 882.49633836022 882.49524993586 75.67 2 0.07638747298283767 0.0034196919541487703 0.016016267186065122 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 19651 12384 ELRARQLEL True PC9_epitope_Rep4 1126.64585612822 1126.64422490379 55.44 3 0.0763761589390791 0.0034196919541487703 0.01602022838071755 ['RCCD1-BLM|2|fusion', 'RCCD1-BLM|1|fusion', 'ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 137942 16467 YFEGIKQTF True PC9_epitope_Rep4 1131.5600608155898 1131.5589699358602 71.309 2 0.07637524861576135 0.0034196919541487703 0.016020547136516097 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 5097 16150 ALLGDLTKA True PC9_epitope_Rep5 900.52803241132 900.52692993586 67.108 2 0.07636873107981015 0.0034196919541487703 0.01602282946806177 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 96649 7731 SAINEVVTR True PC9_epitope_Rep2 987.53490869691 987.53380993586 35.112 2 0.07635599970385011 0.0034196919541487703 0.016027288656470778 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 128087 21959 VPLEFPVVA True PC9_epitope_Rep1 969.5535188831699 969.55242993586 89.283 2 0.07634440710515045 0.0034196919541487703 0.016031349992440852 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 100298 10932 SKFPTQISL True NCI_RA007_Epitope_Rep3 1019.5651461960299 1019.56404993586 50.085 2 0.07634305499600913 0.0034196919541487703 0.01603182375108134 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 46691 9857 ITDTSIGAY True H1975_Epitope_Rep2 939.4549270407099 939.4543749679301 42.902 1 0.0763422840542556 0.0034196919541487703 0.016032093883281934 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.W925C|1|0.12|ENSG00000111799|chr6:75165715-75165715|C/A|missense_variant'] 76139 9197 NMVAKVDEV True PC9_epitope_Rep4 1003.5008316873099 1003.49972993586 42.973 2 0.07634051277070386 0.0034196919541487703 0.016032714543812224 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 39756 17076 HLVPEVPTV True PC9_epitope_Rep5 989.55458151233 989.55348993586 70.702 2 0.07633778339229591 0.0034196919541487703 0.016033670966137347 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 110333 5267 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.43850993586 25.327 2 0.07633310824026629 0.0034196919541487703 0.01603530934545076 ['ENSG00000167470|ENST00000682408|MIDN'] 7010 14596 AQLTSTPAI True PC9_epitope_Rep1 900.4916469026 900.49054993586 60.967 2 0.07632537678214718 0.0034196919541487703 0.01603801913162529 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 42615 7851 IEGQGVFREA True NCI_RA007_Epitope_Rep4 1104.55637241748 1104.55526993586 36.903 2 0.07630963330417509 0.0034196919541487703 0.016043538357485863 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 108482 21554 SYMFVDENTF True PC9_epitope_Rep2 1251.5117902938298 1251.51068993586 88.377 2 0.07630370722394596 0.0034196919541487703 0.016045616335221516 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 142818 14471 YYSPHGHILVL True PC9_epitope_Rep4 1297.68190728377 1297.68025490379 63.573 3 0.0762908083757881 0.0034196919541487703 0.01605014017884812 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 95828 13107 RYIPTAAAF True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 62.032 2 0.07627674214176046 0.0034196919541487703 0.016055074799762363 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 87233 14343 QPLGTLPQA True PC9_epitope_Rep4 923.5076313199098 923.50708496793 63.075 1 0.07627312283118591 0.0034196919541487703 0.01605634473054624 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 121378 6242 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 28.967 2 0.07626920444991334 0.0034196919541487703 0.01605771970376388 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 720 11080 AAVGFPTHL True H1975_Epitope_Rep2 911.48650195251 911.48540993586 47.651 2 0.07626172885846262 0.0034196919541487703 0.016060343218531514 ['ENSG00000177352|ENST00000321895|CCDC71'] 103490 7974 SPQQPGLSA True PC9_epitope_Rep1 883.4399456829099 883.43884993586 35.495 2 0.07625368008954832 0.0034196919541487703 0.016063168333280583 ['ENSG00000170498|ENST00000367194|KISS1'] 49995 21634 KIWEELSVLEV True PC9_epitope_Rep2 1343.73366807311 1343.73256993586 88.69 2 0.07624507854912438 0.0034196919541487703 0.016066187982720463 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 118229 21335 TYLDNGVVF True PC9_epitope_Rep1 1026.5022115862998 1026.5016749679298 86.895 1 0.07624468117063236 0.0034196919541487703 0.016066327498862647 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 108225 22909 SYIALPLTL True PC9_epitope_Rep2 989.57973363101 989.57918496793 93.626 1 0.07624340530603901 0.0034196919541487703 0.01606677545149085 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 33385 19227 GLAAGGIVAV True PC9_epitope_Rep5 826.4912529797799 826.49014993586 78.996 2 0.07624141679089655 0.0034196919541487703 0.016067473637025764 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 54371 12888 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.53333490379 54.591 3 0.07623146004398065 0.0034196919541487703 0.01607096996572791 ['ENSG00000123975|ENST00000314355|CKS2'] 88006 11383 QRNPQGFVL True PC9_epitope_Rep6 1057.5668775315298 1057.56578993586 54.834 2 0.07622627581625449 0.0034196919541487703 0.016072790696930902 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 90396 10461 REIDDYIVQA True H1975_Epitope_Rep3 1220.6037165327198 1220.60317496793 45.3 1 0.07621958248283073 0.0034196919541487703 0.016075141719321066 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 101798 10987 SLPDLTTPLK True NCI_RA007_Epitope_Rep3 1083.61757569171 1083.61646993586 50.305 2 0.0762190741305057 0.0034196919541487703 0.016075320290339708 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 98918 17146 SHADVVNLL True PC9_epitope_Rep3 966.51344497634 966.51234993586 71.108 2 0.07621453211586107 0.0034196919541487703 0.0160769158646382 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 2757 8670 AETLAPVQA True H1975_Epitope_Rep3 898.47599683846 898.47488993586 38.347 2 0.07621364986363476 0.0034196919541487703 0.01607722581008335 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1', 'WWTR1|p.M267I|1|0.44|ENSG00000018408|chr3:149527940-149527940|C/A|missense_variant', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 99140 14056 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 59.157 2 0.07620750218422248 0.0034196919541487703 0.016079385715848785 ['ENSG00000132646|ENST00000379143|PCNA'] 114760 5424 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 28.346 2 0.07620683002693393 0.0034196919541487703 0.016079621885816502 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 40940 21237 HSSVIFIF True PC9_epitope_Rep5 948.5069030439199 948.50580993586 86.738 2 0.07620298888683236 0.0034196919541487703 0.016080971575317436 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 103308 9743 SPLSSHPVV True PC9_epitope_Rep1 921.49198125577 921.49088993586 42.336 2 0.07619986309403338 0.0034196919541487703 0.016082069985940802 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 142892 20183 YYTSVTPVL True PC9_epitope_Rep5 1041.5382627418498 1041.53767496793 82.683 1 0.07618636990877822 0.0034196919541487703 0.016086812324237424 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 134662 15573 VYSQIPAAVKL True PC9_epitope_Rep6 1187.6914093383098 1187.6903099358601 72.111 2 0.07618619650455581 0.0034196919541487703 0.016086873277669472 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 52813 9990 KPADLQNLA True PC9_epitope_Rep5 968.5290950404799 968.52798993586 43.402 2 0.07618123792621953 0.0034196919541487703 0.016088616361898653 ['ENSG00000169504|ENST00000374379|CLIC4', 'chr21:34707864-34707944|341|17.87|0.83|4.43|+|1|None,CLIC6|1', 'CLIC6|p.E691Rfs*3|1|0.05|ENSG00000159212|chr21:34716435-34716436|-/A|frameshift_variant', 'ENSG00000159212|ENST00000349499|CLIC6', 'nc|ENSG00000159212|Q96NY7|CLIC6'] 137764 5139 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 24.844 2 0.07618036830978554 0.0034196919541487703 0.016088922075464956 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 1972 12234 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 52.08 1 0.07617667907986735 0.0034196919541487703 0.01609021908407347 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 52495 7449 KKWTSVIRL True NCI_RA007_Epitope_Rep3 1129.69716342509 1129.69552490379 36.423 3 0.07617322666008147 0.0034196919541487703 0.016091432926521435 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 134335 21883 VYPASKMFPFI True PC9_epitope_Rep5 1298.67331674602 1298.67220993586 89.212 2 0.076173042979818 0.0034196919541487703 0.016091497509385298 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 52483 5785 KKVPVSVNL True NCI_RA007_Epitope_Rep3 982.61751612206 982.61640993586 29.734 2 0.07616745168221416 0.0034196919541487703 0.016093463552134597 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 17274 14845 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50708496793 62.365 1 0.07616664329042455 0.0034196919541487703 0.01609374782181857 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 96934 12088 SAVPPGTSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 51.491 2 0.07614474246603092 0.0034196919541487703 0.016101450993126917 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 127683 10580 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 45.642 2 0.07614166676057721 0.0034196919541487703 0.016102533085396328 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 87300 11275 QPQPQPYAV True PC9_epitope_Rep2 1026.5134449763398 1026.51287496793 48.695 1 0.07613992691481276 0.0034196919541487703 0.01610314522657967 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 1707 9784 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 42.621 1 0.07612162466070665 0.0034196919541487703 0.01610958594134861 ['ENSG00000010292|ENST00000315579|NCAPD2'] 7125 13066 AQVVQVVL True NCI_RA007_Epitope_Rep4 854.5225531080598 854.52200496793 57.357 1 0.07610588849867359 0.0034196919541487703 0.01611512554677054 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.K423R|1|0.3|ENSG00000186432|chr3:160508211-160508211|T/C|missense_variant'] 134097 17568 VYKTIMEQF True PC9_epitope_Rep2 1157.57908200801 1157.5779899358602 72.851 2 0.07609698240759755 0.0034196919541487703 0.01611826154720733 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 72238 18830 MHFLENISL True PC9_epitope_Rep6 1102.5481162329 1102.5470099358602 85.073 2 0.0760915966982136 0.0034196919541487703 0.016120158231708162 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 50053 8802 KKFENEIIL True NCI_RA007_Epitope_Rep5 1132.6492101731599 1132.64755490379 40.524 3 0.07609080025898055 0.0034196919541487703 0.01612043873125417 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 96039 16731 RYLPTGSFPFL True NCI_RA007_Epitope_Rep4 1296.6866583110398 1296.68556993586 72.539 2 0.07608330743558898 0.0034196919541487703 0.016123077866628883 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 99144 12286 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 55.074 2 0.07607389986267657 0.0034196919541487703 0.016126391988655765 ['ENSG00000132646|ENST00000379143|PCNA'] 117090 22639 TVISILNTI True PC9_epitope_Rep5 972.58554728744 972.58499496793 92.082 1 0.07605542555041346 0.0034196919541487703 0.016132902010840302 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 85233 6665 QEQEGGPAVP True H1975_Epitope_Rep3 1010.4668887067396 1010.46578993586 30.591 2 0.07605100507058274 0.0034196919541487703 0.01613446007317751 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 104346 17939 SQISDTSVVL True PC9_epitope_Rep2 1047.5448046742702 1047.54427496793 74.307 1 0.07604791205170662 0.0034196919541487703 0.01613555033600976 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 31623 12091 GEFGDLNAV True NCI_RA007_Epitope_Rep3 920.4239612655999 920.42286993586 54.678 2 0.07604768311904517 0.0034196919541487703 0.01613563103555388 ['ENSG00000080298|ENST00000617270|RFX3'] 35721 7636 GTFPGNYVK True NCI_RA007_Epitope_Rep5 981.4919812557698 981.49088993586 36.076 2 0.07604066470820592 0.0034196919541487703 0.016138105231862866 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'PDLIM1-SORBS1|11|fusion', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'PDLIM1-SORBS1|9|fusion', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'PDLIM1-SORBS1|7|fusion', 'PDLIM1-SORBS1|10|fusion', 'PDLIM1-SORBS1|8|fusion', 'nc|ENSG00000095637|Q9BX66-4|SORBS1', 'PDLIM1-SORBS1|6|fusion', 'nc|ENSG00000154556|O94875-8|SORBS2', 'nc|ENSG00000154556|O94875-12|SORBS2', 'nc|ENSG00000154556|O94875-10|SORBS2', 'nc|ENSG00000154556|O94875-4|SORBS2', 'ENST00000478461.1_1_4:186508783-186510953:-|nuORF', 'nc|ENSG00000154556|O94875-2|SORBS2', 'nc|ENSG00000154556|O94875-3|SORBS2', 'nc|ENSG00000154556|O94875-9|SORBS2', 'nc|ENSG00000154556|O94875-7|SORBS2', 'nc|ENSG00000154556|O94875|SORBS2', 'nc|ENSG00000154556|O94875-11|SORBS2', 'ENSG00000154556|ENST00000695409|SORBS2'] 31469 5245 GEAPPSAPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 25.238 2 0.07602553310299665 0.0034196919541487703 0.016143440770901983 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 15441 18362 EALFQPSFL True H1975_Epitope_Rep3 1050.53859709502 1050.53750993586 76.97 2 0.07602491595888647 0.0034196919541487703 0.016143658416313163 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 108973 8914 TAFENAYLK True NCI_RA007_Epitope_Rep4 1055.5287606873096 1055.52766993586 41.12 2 0.07602048795436597 0.0034196919541487703 0.01614522010076741 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant'] 106927 10084 SVDSHFQEV True PC9_epitope_Rep1 1046.4668887067398 1046.4657899358601 43.658 2 0.07601831527873992 0.0034196919541487703 0.016145986419259687 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 98175 10332 SESVPVIAA True H1975_Epitope_Rep3 871.46509780159 871.46454496793 44.794 1 0.07600985414494252 0.0034196919541487703 0.01614897104574658 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 49148 3213 KELEKTYSA True H1975_Epitope_Rep2 1067.54989005471 1067.5487899358602 16.915 2 0.07600792405396184 0.0034196919541487703 0.01614965194858724 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 88021 13130 QRPPTIVL True PC9_epitope_Rep2 922.5600012459399 922.55890993586 55.777 2 0.07600401733700922 0.0034196919541487703 0.01615103025290235 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 74739 8617 NHANGLTL True PC9_epitope_Rep5 838.4297153523801 838.42860993586 38.088 2 0.07599498561883314 0.0034196919541487703 0.016154217096467062 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 96492 13663 SADDTYLQL True NCI_RA007_Epitope_Rep4 1024.47130538084 1024.47020993586 59.776 2 0.07598899714038367 0.0034196919541487703 0.01615633045537749 ['nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'PLEKHA7|p.F829Sfs*28|1|0.08|ENSG00000166689|chr11:16794937-16794944|TTCTGAAG/-|frameshift_variant'] 49943 16817 KILPTLEAV True PC9_epitope_Rep4 982.60628273202 982.60518993586 72.658 2 0.07597940291395311 0.0034196919541487703 0.01615971683481542 ['ENSG00000143621|ENST00000361891|ILF2'] 129190 11730 VQSNRILGV True PC9_epitope_Rep3 984.5716285587998 984.57052993586 50.139 2 0.07597540756532536 0.0034196919541487703 0.016161127228676363 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 103269 12725 SPLLLQAKA True PC9_epitope_Rep3 939.5753169569099 939.57420993586 53.968 2 0.07597264937878644 0.0034196919541487703 0.016162100960169356 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 38062 11922 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.44900993586 50.724 2 0.07596689448055437 0.0034196919541487703 0.016164132806513715 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 1137 6469 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 29.799 2 0.07596353340496202 0.0034196919541487703 0.016165319590807598 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 128447 18304 VPSAVLIVA True PC9_epitope_Rep6 867.5429541994699 867.5424049679301 83.05 1 0.07595953182625914 0.0034196919541487703 0.016166732640447504 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 33380 18982 GLAAGGIVAV True PC9_epitope_Rep2 826.4912529797799 826.49014993586 78.379 2 0.07594933441327759 0.0034196919541487703 0.016170334102375464 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 76567 21890 NQLDSLMGL True PC9_epitope_Rep2 989.48518162317 989.4846349679301 89.676 1 0.07594858115978723 0.0034196919541487703 0.01617060016163408 ['ENSG00000135148|ENST00000412615|TRAFD1'] 59195 13924 LFDQAFGLPR True NCI_RA007_Epitope_Rep5 1162.6134933707797 1162.6123899358602 60.243 2 0.0759434325823112 0.0034196919541487703 0.016172418817649855 ['ENSG00000106211|ENST00000248553|HSPB1'] 7385 5955 ARSTDQTVL True PC9_epitope_Rep5 989.51417325233 989.51306993586 27.901 2 0.07594332047292832 0.0034196919541487703 0.016172458420689984 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 111624 15807 TIDPSNPMV True PC9_epitope_Rep5 972.45863252216 972.45752993586 65.791 2 0.07594098580216005 0.0034196919541487703 0.016173283172020155 ['ENSG00000198730|ENST00000361367|CTR9'] 14927 17300 DYEAGHLSF True PC9_epitope_Rep1 1037.4454249861699 1037.4443299358602 71.36 2 0.07593959458922137 0.0034196919541487703 0.01617377465383785 ['nc|ENSG00000154370|Q96F44-3|TRIM11', 'ENSG00000154370|ENST00000284551|TRIM11'] 9099 21468 AVIGGLVYL True PC9_epitope_Rep4 903.5429541994699 903.5424049679301 90.766 1 0.07593943610420523 0.0034196919541487703 0.016173830643636537 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 110295 6943 TESQALVSA True H1975_Epitope_Rep3 904.4501760134399 904.44906993586 31.667 2 0.07593897271945634 0.0034196919541487703 0.016173994349857102 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 1776 17315 AEGWMDWAA True H1975_Epitope_Rep2 1035.4120166829098 1035.41147496793 71.895 1 0.0759372013692571 0.0034196919541487703 0.016174620153020885 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1'] 97307 10224 SEALPSDIAA True H1975_Epitope_Rep2 972.47639076128 972.47584496793 44.332 1 0.07593467183835892 0.0034196919541487703 0.016175513854183084 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 14949 10193 DYFEEYGK True NCI_RA007_Epitope_Rep1 1049.4341915961297 1049.4330899358602 43.66 2 0.07593286624224306 0.0034196919541487703 0.016176151812211475 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 4311 20166 AIIGGMFTV True PC9_epitope_Rep6 907.48372507119 907.48317496793 90.242 1 0.07592901172307437 0.0034196919541487703 0.016177513779644128 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 98173 10403 SESVPVIAA True H1975_Epitope_Rep2 871.46509780159 871.46454496793 45.028 1 0.07592302104551721 0.0034196919541487703 0.016179630755832546 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 74151 8902 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.50377496793 39.208 1 0.07591692151502036 0.0034196919541487703 0.01618178646353126 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 114416 15623 TPTPVPVV True PC9_epitope_Rep3 808.4694549060399 808.46890496793 65.241 1 0.07588758143727767 0.0034196919541487703 0.016192159630414548 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 134663 15664 VYSQIPAAVKL True PC9_epitope_Rep6 1187.6914093383098 1187.6903099358601 72.457 2 0.07587998873177111 0.0034196919541487703 0.016194845035950298 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 66879 18561 LSNIFVIGK True PC9_epitope_Rep5 989.5909670210499 989.58986993586 76.42 2 0.07586923077056336 0.0034196919541487703 0.016198650646975475 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 114476 21490 TPYGYFLISA True PC9_epitope_Rep4 1130.5648118428599 1130.56370993586 90.848 2 0.075860068014023 0.0034196919541487703 0.016201892614081056 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 99257 11912 SHQESLSVL True PC9_epitope_Rep5 998.5032742154599 998.50216993586 50.817 2 0.07585758255601353 0.0034196919541487703 0.016202772123230236 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant'] 98171 10142 SESVPVIAA True H1975_Epitope_Rep1 871.46509780159 871.46454496793 43.95 1 0.07585020492658698 0.0034196919541487703 0.016205383047975683 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 90110 6979 REAQSFISA True NCI_RA007_Epitope_Rep5 1007.5036085686298 1007.50250993586 33.526 2 0.07584745445439511 0.0034196919541487703 0.016206356533575328 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 107923 12180 SVVTGGVQSV True PC9_epitope_Rep3 931.49746055903 931.49636993586 51.886 2 0.07583792511372318 0.0034196919541487703 0.016209729712596075 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 24800 7155 FATHAAALSVR True PC9_epitope_Rep4 1142.6196413803798 1142.61799490379 34.801 3 0.07583584998001264 0.0034196919541487703 0.01621046435146237 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 22432 13018 ETERFRELLLY True H1975_Epitope_Rep2 1467.7721788401498 1467.7705349037901 55.193 3 0.07582666601877025 0.0034196919541487703 0.016213716030041285 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 89613 13590 QYQEAFQKL True PC9_epitope_Rep1 1153.5767735088898 1153.57566993586 57.129 2 0.07579806794669226 0.0034196919541487703 0.016223845372973344 ['ENSG00000082516|ENST00000285873|GEMIN5'] 43191 19897 IFIDKIYSI True PC9_epitope_Rep4 1110.63249747986 1110.6314099358601 84.667 2 0.07579216681291867 0.0034196919541487703 0.016225936268845925 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 78283 20278 NYIKDLNIL True PC9_epitope_Rep1 1104.61791004488 1104.6168099358601 82.826 2 0.0757904290545 0.0034196919541487703 0.01622655204107327 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 4085 18500 AHPPLLVL True PC9_epitope_Rep2 858.53272386894 858.53162993586 76.497 2 0.075786973028707 0.0034196919541487703 0.016227776743614124 ['nc|ENSG00000130810|Q9NQ55-2|PPAN', 'ENSG00000130810|ENST00000253107|PPAN', 'nc|ENSG00000130810|Q9NQ55-3|PPAN'] 26089 5860 FGPGIEGK True H1975_Epitope_Rep3 803.41775368635 803.41664993586 27.554 2 0.0757847321425167 0.0034196919541487703 0.016228570886435204 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 7283 19472 ARDSLPVLL True PC9_epitope_Rep5 982.58113061334 982.58002993586 79.953 2 0.07578020858154602 0.0034196919541487703 0.016230174091769266 ['ENST00000494870.5_1_X:2838537-2847316:-|nuORF', 'nc|ENSG00000006756|P51689-2|ARSD', 'nc|ENSG00000006756|P51689-3|ARSD', 'ENSG00000006756|ENST00000381154|ARSD'] 44965 12528 IPAGTVTVNAA True PC9_epitope_Rep3 1012.55530978832 1012.55420993586 53.213 2 0.07577637037870774 0.0034196919541487703 0.016231534513518865 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 20052 14891 EMDSPILGDY True H1975_Epitope_Rep1 1138.4852411928198 1138.48467496793 62.515 1 0.07577545073472351 0.0034196919541487703 0.016231860490099 ['ENSG00000182195|ENST00000370526|LDOC1'] 105460 18404 SRVFSVAEL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 75.58 2 0.0757753300291657 0.0034196919541487703 0.016231903275787867 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 24168 11016 EYQIKTNQL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 47.693 2 0.0757662420273788 0.0034196919541487703 0.016235124940574358 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF', 'ENST00000602395.1_1_10:22607528-22615407:+|nuORF', 'ENST00000496071.5_1_10:22607528-22608924:+|nuORF', 'ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3'] 52866 11493 KPFGQVIST True PC9_epitope_Rep1 975.5389314481899 975.53782993586 49.087 2 0.07576534627088989 0.0034196919541487703 0.016235442515362544 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 76295 13774 NPNQYNYIA True PC9_epitope_Rep3 1095.49852318819 1095.49742993586 58.062 2 0.07576042070986051 0.0034196919541487703 0.016237188890247896 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 76521 18945 NQINGSFAL True PC9_epitope_Rep2 962.48214484806 962.48104993586 78.237 2 0.07575702388453188 0.0034196919541487703 0.01623839334851071 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 38041 11579 HASDRIIAL True PC9_epitope_Rep1 994.5559784946599 994.55488993586 49.417 2 0.07575446686074937 0.0034196919541487703 0.016239300081905102 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 21137 5076 ERAPGETAL True PC9_epitope_Rep6 942.4770594676199 942.47596993586 27.182 2 0.07575242188418861 0.0034196919541487703 0.01624002527474728 ['ENSG00000092148|ENST00000399332|HECTD1'] 37505 20210 GVVDIFQTV True PC9_epitope_Rep6 976.52294703088 976.52239496793 90.413 1 0.07574801377650715 0.0034196919541487703 0.016241588587525762 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRS|p.K1913N|1|0.1|ENSG00000105426|chr19:5207961-5207961|C/G|missense_variant', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 47132 20831 ITVGSLVTV True PC9_epitope_Rep5 887.5327834385901 887.5322349679301 85.175 1 0.07574788353915689 0.0034196919541487703 0.016241634777666315 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 29541 9443 FVHPGAATV True PC9_epitope_Rep3 897.4708518883699 897.46974993586 41.262 2 0.07574703325166524 0.0034196919541487703 0.016241936344693075 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 121708 16925 VFLENVIR True PC9_epitope_Rep4 988.5705659296399 988.56946993586 73.089 2 0.07574474890231335 0.0034196919541487703 0.016242746548789006 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 60492 5944 LHAAEQESL True PC9_epitope_Rep2 996.4876241513201 996.48652993586 28.254 2 0.07571234959126436 0.0034196919541487703 0.016254241864765918 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000518168.5_1_5:179228470-179228931:-|nuORF', 'ENST00000520134.1_1_5:179228412-179228937:-|nuORF'] 131457 16253 VTITGIVKV True PC9_epitope_Rep4 928.59571804832 928.59462993586 70.468 2 0.07570713939834277 0.0034196919541487703 0.016256091154984366 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 111033 11023 THDEAINVL True PC9_epitope_Rep6 1010.5032742154599 1010.50216993586 53.302 2 0.07570144413901961 0.0034196919541487703 0.016258112837447748 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 17287 14416 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 63.359 2 0.07569860545332294 0.0034196919541487703 0.016259120591250724 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 118578 21856 TYQVLAVTF True PC9_epitope_Rep2 1040.5542471591598 1040.5531499358601 89.544 2 0.07568894456142661 0.0034196919541487703 0.016262550713287402 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 26091 9282 FGPGVAFR True H1975_Epitope_Rep3 849.4497225209699 849.44862993586 40.697 2 0.07568868307517784 0.0034196919541487703 0.016262643563955105 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 35274 7382 GRFADSHEL True PC9_epitope_Rep5 1030.4832074772198 1030.48210993586 33.353 2 0.07568210471079678 0.0034196919541487703 0.01626497962568202 ['nc|ENSG00000121680|Q9Y5Y5-2|PEX16', 'ENSG00000121680|ENST00000378750|PEX16'] 12047 8187 DHSQAVTL True PC9_epitope_Rep3 869.42429561877 869.42318993586 36.471 2 0.07567446848704784 0.0034196919541487703 0.016267691738922258 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 24412 16042 FADDMYSLY True H1975_Epitope_Rep2 1123.45321278855 1123.4526749679299 66.906 1 0.07566801230725499 0.0034196919541487703 0.016269985071466635 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 132103 8667 VTTVTEIAG True H1975_Epitope_Rep3 889.4756624852898 889.47511496793 38.336 1 0.07566790923540674 0.0034196919541487703 0.016270021686585846 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 40535 13080 HRFGGLVL True PC9_epitope_Rep4 897.5184707871299 897.51736993586 58.204 2 0.07566501847071354 0.0034196919541487703 0.016271048629620293 ['ENSG00000007520|ENST00000007390|TSR3'] 104958 16204 SRDGMNIVL True PC9_epitope_Rep3 1003.5120650773499 1003.51096993586 67.466 2 0.07565720110399476 0.0034196919541487703 0.01627382604855946 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 31183 17610 GAYSPIVLL True H1975_Epitope_Rep2 931.53786881903 931.5373249679301 73.052 1 0.07564787524358209 0.0034196919541487703 0.016277139995370313 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 41510 14731 HYMSINDSF True PC9_epitope_Rep4 1112.45969515132 1112.4585899358601 64.596 2 0.07564343571890536 0.0034196919541487703 0.016278717802420968 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 15099 20702 DYVEGLRVF True PC9_epitope_Rep3 1096.5553097883198 1096.5542099358602 84.904 2 0.07563762121085613 0.0034196919541487703 0.01628078449405309 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 35239 13473 GRAPQVLVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 63.518 2 0.07562768918625631 0.0034196919541487703 0.01628431526898952 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 53092 8073 KPQPSILQA True PC9_epitope_Rep4 980.5654805491998 980.56438993586 38.503 2 0.07562456768615632 0.0034196919541487703 0.016285425090785198 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 48500 8521 KAIEQADLL True NCI_RA007_Epitope_Rep3 999.5600608155898 999.55896993586 40.588 2 0.07561691362889493 0.0034196919541487703 0.016288146721460596 ['nc|ENSG00000182287|P56377|AP1S2', 'ENSG00000106367|ENST00000337619|AP1S1', 'ENSG00000182287|ENST00000672987|AP1S2', 'nc|ENSG00000182287|P56377-2|AP1S2'] 14185 13927 DSDSVPAFY True H1975_Epitope_Rep1 999.4185415319898 999.41797496793 58.724 1 0.0756103372532605 0.0034196919541487703 0.016290485488366296 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 40208 10047 HQGPATTVAF True PC9_epitope_Rep2 1027.50869394907 1027.50758993586 43.971 2 0.07559616034571164 0.0034196919541487703 0.016295528308571727 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 48983 7413 KEFENPEVP True NCI_RA007_Epitope_Rep3 1087.51858992643 1087.51748993586 36.283 2 0.07559187613869606 0.0034196919541487703 0.01629705251555554 ['ENSG00000164754|ENST00000297338|RAD21'] 48265 7582 IYQRDPLKL True NCI_RA007_Epitope_Rep3 1144.6604435631998 1144.65880490379 36.955 3 0.07559018473099827 0.0034196919541487703 0.016297654310021087 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 19396 11161 ELLTTMGDR True PC9_epitope_Rep2 1034.5066453437398 1034.50554993586 48.256 2 0.07557632619979425 0.0034196919541487703 0.01630258588632753 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 7983 19745 ATDFGEALV True PC9_epitope_Rep2 921.4443623570098 921.44381496793 81.338 1 0.07556936349176753 0.0034196919541487703 0.016305064099588536 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 14161 13388 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.45847496793 56.631 1 0.07556803902569166 0.0034196919541487703 0.01630553555206818 ['ENSG00000149823|ENST00000279281|VPS51'] 118426 12790 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47107496793 60.694 1 0.0755627105077656 0.0034196919541487703 0.016307432401650435 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 104739 14468 SQVFKLYTA True PC9_epitope_Rep4 1055.56514619603 1055.56404993586 63.562 2 0.07556143665820961 0.0034196919541487703 0.01630788589795753 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-2|ANAPC5', 'ENST00000534976.5_1_12:121766230-121783868:-|nuORF', 'ENST00000541652.5_1_12:121773337-121785669:-|nuORF'] 1375 12177 AEEDPPWAP True H1975_Epitope_Rep1 1010.4345259492999 1010.43397496793 51.857 1 0.0755547146382257 0.0034196919541487703 0.016310279162573812 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 32915 15705 GHVVDIVAL True PC9_epitope_Rep6 921.52836676449 921.52726993586 72.624 2 0.07555410878530203 0.0034196919541487703 0.01631049488260983 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 103219 8113 SPKQILDPA True PC9_epitope_Rep2 967.5338460677499 967.53274993586 36.565 2 0.07554561046873448 0.0034196919541487703 0.01631352107391938 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 121876 14066 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 65.977 2 0.07554046608548175 0.0034196919541487703 0.01631535320704579 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 114592 11326 TQDGTPITV True PC9_epitope_Rep6 930.4658260775799 930.46472993586 54.59 2 0.0755379266295889 0.0034196919541487703 0.016316257685678143 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 128302 6300 VPPPPPIAR True H1975_Epitope_Rep3 942.56508662638 942.56398993586 29.237 2 0.07553709256479543 0.0034196919541487703 0.016316554764930182 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 54513 15408 KYIEGVSDF True PC9_epitope_Rep5 1056.51277627 1056.51166993586 64.276 2 0.07553125484951419 0.0034196919541487703 0.016318634197773574 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 121862 14727 VFPEKGYSF True PC9_epitope_Rep4 1072.5229470308798 1072.52184993586 64.581 2 0.07552715873480281 0.0034196919541487703 0.016320093408317367 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 115428 6890 TRLQQAQAL True PC9_epitope_Rep2 1027.5774422152297 1027.5763499358602 31.905 2 0.07551940662628193 0.0034196919541487703 0.01632285537225151 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 73472 23271 MVDDVFYIV True PC9_epitope_Rep1 1099.52598380599 1099.52488993586 94.297 2 0.07551585955191129 0.0034196919541487703 0.016324119288623228 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000526700.5_1_16:70530266-70542451:-|nuORF'] 120424 8354 VEEPQALAA True H1975_Epitope_Rep1 926.4709114580198 926.4703649679301 37.063 1 0.0755084655448574 0.0034196919541487703 0.01632675426186913 ['ENSG00000105447|ENST00000253237|GRWD1'] 97471 11721 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 50.225 1 0.07550300430136148 0.0034196919541487703 0.016328700718106628 ['ENSG00000135900|ENST00000258383|MRPL44'] 89067 13882 QVMQGMGVSA True PC9_epitope_Rep1 1006.4575869763398 1006.45707496793 58.237 1 0.07550260598307285 0.0034196919541487703 0.016328842692237687 ['ENSG00000169813|ENST00000682386|HNRNPF'] 137603 7965 YEETSGVSV True H1975_Epitope_Rep2 969.4291062156899 969.42800993586 35.586 2 0.0754808621205304 0.0034196919541487703 0.016336594686102723 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 6247 5266 APQPQRTL True PC9_epitope_Rep5 909.50321464581 909.50210993586 25.271 2 0.07547624123174322 0.0034196919541487703 0.016338242539716528 ['ENST00000583776.1_1_18:2906615-2908961:+|nuORF'] 17282 15976 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50708496793 66.598 1 0.07546912915049951 0.0034196919541487703 0.016340779079138498 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 32902 9330 GHVAPSVSL True PC9_epitope_Rep4 865.4657665079301 865.46466993586 43.495 2 0.07545927739721199 0.0034196919541487703 0.016344293334528432 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 128713 13383 VPWMPPGKSSA True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 56.508 2 0.07545362051232553 0.0034196919541487703 0.016346311540989478 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 109322 21070 TAYDNFVEL True PC9_epitope_Rep2 1070.49204082542 1070.49147496793 86.502 1 0.07544366530606675 0.0034196919541487703 0.016349863822932853 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 89403 9894 QYAPSTAQF True NCI_RA007_Epitope_Rep5 1011.4661604307499 1011.46506993586 44.7 2 0.0754288307893442 0.0034407427635172036 0.016355158506282583 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 111914 13317 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 62.88 2 0.07542713606541045 0.0034407427635172036 0.016355763482789255 ['ENSG00000213719|ENST00000375784|CLIC1'] 104416 11963 SQLEEGKPGYL True PC9_epitope_Rep1 1219.6084675599898 1219.60736993586 50.881 2 0.07542262065788878 0.0034407427635172036 0.01635737547860366 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 96733 10295 SALSDLHA True PC9_epitope_Rep2 812.4028318982001 812.40172993586 44.929 2 0.0754214733865349 0.0034407427635172036 0.016357785076862183 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF'] 47071 4514 ITSPVVTQK True NCI_RA007_Epitope_Rep3 971.56514619603 971.56404993586 24.612 2 0.07541848002777411 0.0034407427635172036 0.016358853809318494 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR', 'ENST00000504466.1_1_5:74645886-74647190:+|nuORF'] 40457 7126 HRDERVLSL True PC9_epitope_Rep2 1123.60980497267 1123.60816490379 32.804 3 0.07541700510297168 0.0034407427635172036 0.016359380432325096 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 142907 20384 YYVGGEIVTI True PC9_epitope_Rep4 1112.57537652656 1112.5748749679299 86.552 1 0.0754015120389416 0.0034407427635172036 0.016364913196484063 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 43032 5370 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 25.696 2 0.07539148335664587 0.0034407427635172036 0.016368495491565938 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 7227 10852 ARDDTHYLL True PC9_epitope_Rep5 1102.54072235334 1102.5396299358601 46.73 2 0.07538895384969244 0.0034407427635172036 0.016369399159320057 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 94748 5460 RSHQVSVTL True NCI_RA007_Epitope_Rep4 1025.56179215109 1025.5606899358602 27.585 2 0.07538406357313249 0.0034407427635172036 0.016371146345053763 ['ENSG00000112343|ENST00000357085|TRIM38'] 75836 21211 NLPIFLPRV True PC9_epitope_Rep3 1067.64915060351 1067.6480499358602 86.878 2 0.0753815829906103 0.0034407427635172036 0.016372032667736392 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 98332 12109 SEWLIRPP True NCI_RA007_Epitope_Rep3 996.5392658013599 996.53816993586 54.746 2 0.07538075132470488 0.0034407427635172036 0.01637232983550287 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 52385 8689 KKLPPLPSL True NCI_RA007_Epitope_Rep3 991.64300259391 991.64190993586 41.258 2 0.0753608452754548 0.0034407427635172036 0.01637944409004284 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 10041 18721 AYSEYVNNF True PC9_epitope_Rep1 1105.47163973401 1105.4705499358602 76.8 2 0.0753544687603468 0.0034407427635172036 0.016381723611600188 ['ENST00000523711.5_1_8:1824717-1874701:+|nuORF', 'nc|ENSG00000104728|O15013-7|ARHGEF10', 'nc|ENSG00000104728|O15013-4|ARHGEF10', 'ENSG00000104728|ENST00000349830|ARHGEF10', 'nc|ENSG00000104728|O15013-6|ARHGEF10', 'nc|ENSG00000104728|O15013|ARHGEF10'] 85835 4948 QHEGGVQEL True PC9_epitope_Rep2 995.46722305991 995.46612993586 24.396 2 0.07534951736526639 0.0034407427635172036 0.016383493874962626 ['ENSG00000090273|ENST00000321265|NUDC'] 1986 12153 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47511496793 51.917 1 0.0753424281150476 0.0034407427635172036 0.016386028791940597 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 47696 19127 IYANTINTF True PC9_epitope_Rep1 1055.52876068731 1055.52766993586 78.363 2 0.07533998579751613 0.0034407427635172036 0.016386902180749587 ['nc|ENSG00000115380|Q12805-5|EFEMP1', 'nc|ENSG00000115380|Q12805-2|EFEMP1', 'nc|ENSG00000115380|Q12805-4|EFEMP1', 'nc|ENSG00000115380|Q12805-3|EFEMP1', 'ENSG00000115380|ENST00000355426|EFEMP1'] 32956 10804 GIDIFTGK True NCI_RA007_Epitope_Rep2 849.45961849833 849.45852993586 46.628 2 0.07533572970208481 0.0034407427635172036 0.016388424292056194 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 47313 13410 IVEESVTGV True PC9_epitope_Rep5 931.4862271689899 931.48512993586 56.598 2 0.07532636742422044 0.0034407427635172036 0.016391772995400972 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2', 'ENST00000492628.1_1_7:129040195-129045055:+|nuORF'] 62506 20886 LLIPGLATA True PC9_epitope_Rep4 867.54295419947 867.5424049679301 88.496 1 0.07531661664366365 0.0034407427635172036 0.016395261335908358 ['ENSG00000125356|ENST00000371437|NDUFA1'] 76027 12079 NMAEGFRTV True PC9_epitope_Rep5 1023.4807649490699 1023.47966993586 51.456 2 0.07531653655958427 0.0034407427635172036 0.0163952899888394 ['ENSG00000111331|ENST00000228928|OAS3'] 11829 16278 DHGGVIVAI True PC9_epitope_Rep3 879.48141657207 879.48030993586 67.751 2 0.07531622849684975 0.0034407427635172036 0.016395400209686835 ['SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2'] 107889 12863 SVVPDVRSV True PC9_epitope_Rep5 956.52909504048 956.52798993586 54.486 2 0.0753002920427807 0.0034407427635172036 0.0164011030072463 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 93004 11283 RPKPSSSPVIF True PC9_epitope_Rep3 1213.68190728377 1213.68025490379 48.408 3 0.07529838471778579 0.0034407427635172036 0.016401785659756293 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 70967 12477 LYGRHFNYL True PC9_epitope_Rep4 1181.59817765981 1181.59654490379 55.8 3 0.0752872547808528 0.0034407427635172036 0.0164057697137851 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 92782 20271 RPAGALVALVV True PC9_epitope_Rep1 1064.67061432408 1064.66950993586 82.8 2 0.0752849572456067 0.0034407427635172036 0.016406592247943018 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 47576 14575 IVVGRITEV True PC9_epitope_Rep3 984.5967806774798 984.59568993586 61.189 2 0.0752846472747611 0.0034407427635172036 0.016406703222676927 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 107808 9034 SVTSEGIKAV True PC9_epitope_Rep1 989.5393253710098 989.53822993586 39.599 2 0.07528409976389804 0.0034407427635172036 0.016406899242407517 ['nc|ENSG00000151743|Q8IY45-2|AMN1', 'ENSG00000151743|ENST00000281471|AMN1'] 52882 11231 KPFKEFVEA True PC9_epitope_Rep1 1093.5807962601698 1093.5796899358602 48.08 2 0.07527844162648724 0.0034407427635172036 0.016408925095357418 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 111205 12267 THISDTSVVL True PC9_epitope_Rep4 1070.56078909158 1070.5596899358602 55.002 2 0.07527424775952747 0.0034407427635172036 0.016410426827736475 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 96076 20175 RYLTVAAVF True PC9_epitope_Rep5 1038.5862159937797 1038.5851099358601 82.651 2 0.07526843544969779 0.0034407427635172036 0.016412508300820496 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 139982 4069 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 21.923 2 0.075267092715598 0.0034407427635172036 0.016412989188475578 ['ENSG00000146648|ENST00000275493|EGFR'] 111441 8767 THTPSGLTV True PC9_epitope_Rep1 911.47124581119 911.47014993586 38.561 2 0.07526412756752965 0.0034407427635172036 0.016414051174988783 ['ENSG00000116685|ENST00000376572|KIAA2013', 'nc|ENSG00000116685|Q8IYS2-2|KIAA2013'] 17361 10243 EHDGSLFQA True PC9_epitope_Rep4 1002.4406739589 1002.43956993586 47.08 2 0.07526235343098785 0.0034407427635172036 0.016414686623792404 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 5993 9088 APIIDVVR True H1975_Epitope_Rep1 881.53345214493 881.53234993586 39.861 2 0.07524585175555455 0.0034407427635172036 0.016420598185091315 ['ENSG00000166441|ENST00000314138|RPL27A'] 4106 10648 AHSEPLAL True PC9_epitope_Rep1 836.43921740692 836.43812993586 45.849 2 0.07524585135003367 0.0034407427635172036 0.016420598330389502 ['ENSG00000132017|ENST00000254337|DCAF15'] 114754 6188 TQKSLSLSPG True NCI_RA007_Epitope_Rep1 1016.5502244078799 1016.54912993586 28.105 2 0.0752453096671894 0.0034407427635172036 0.016420792416487893 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 6375 5976 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 29.933 2 0.0752437381493744 0.0034407427635172036 0.016421355506701978 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 21174 11183 ERDGGFSEL True PC9_epitope_Rep2 1008.4512386426 1008.4501499358599 48.341 2 0.0752404411287915 0.0034407427635172036 0.01642253691987177 ['ENSG00000172167|ENST00000305949|MTBP'] 4126 10235 AHSPLAAQL True PC9_epitope_Rep2 906.4923156089401 906.49120993586 44.704 2 0.07523748031389563 0.0034407427635172036 0.016423597928738962 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 55208 12501 LADAINTEF True NCI_RA007_Epitope_Rep3 992.48147614172 992.48036993586 56.403 2 0.07523642424218532 0.0034407427635172036 0.016423976387781362 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 43862 12301 IHSSIVSTL True PC9_epitope_Rep2 955.5338460677501 955.53274993586 52.627 2 0.07523278896580826 0.0034407427635172036 0.016425279205353277 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 96423 17813 SAAFPGASL True PC9_epitope_Rep2 819.41266830591 819.41156993586 73.81 2 0.07523183409945591 0.0034407427635172036 0.016425621428210184 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 139411 20296 YLPDSLTQL True PC9_epitope_Rep4 1048.54407639828 1048.54357496793 86.211 1 0.07522032270230608 0.0034407427635172036 0.016429747620425372 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 52718 16577 KMIEDLQNEL True PC9_epitope_Rep4 1231.61183868827 1231.6107499358602 71.739 2 0.07521454106067889 0.0034407427635172036 0.01643182037972139 ['ENSG00000198887|ENST00000361138|SMC5'] 76746 17109 NQVLNLIKA True PC9_epitope_Rep3 1011.6076797143498 1011.60658993586 70.962 2 0.07521235044980268 0.0034407427635172036 0.016432605792766418 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 85268 17874 QEQLLAILP True H1975_Epitope_Rep1 1023.5964463243098 1023.59587496793 74.443 1 0.07519856991287148 0.0034407427635172036 0.016437547414100754 ['ENSG00000171222|ENST00000305978|SCAND1'] 36654 21602 GVIGGGVFQAI True PC9_epitope_Rep2 1016.5654805491998 1016.56438993586 88.566 2 0.07519846736703462 0.0034407427635172036 0.016437584191633967 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 26235 7375 FHDSAVTSV True PC9_epitope_Rep4 961.45051036661 961.44940993586 35.706 2 0.0751958248902639 0.0034407427635172036 0.016438531928663458 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 116661 6569 TVAVGVIK True NCI_RA007_Epitope_Rep1 785.50108938749 785.49998993586 29.566 2 0.07519529912601042 0.0034407427635172036 0.016438720502614995 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 22074 15792 ESMLNTVLY True H1975_Epitope_Rep2 1068.51614739828 1068.5150499358601 65.928 2 0.07518765952557077 0.0034407427635172036 0.016441460797559346 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF'] 48895 6503 KEDGRRWRMFR True NCI_RA007_Epitope_Rep1 1535.7891834003096 1535.7875249037902 29.311 3 0.07518324113484014 0.0034407427635172036 0.01644304585122393 ['ENST00000560458.5_1_15:59970098-59981480:-|nuORF', 'BNIP2|p.V285Afs*12|1|0.19|ENSG00000140299|chr15:59668931-59668931|A/-|frameshift_variant', 'ENSG00000140299|ENST00000607373|BNIP2', 'nc|ENSG00000140299|Q12982-2|BNIP2'] 109020 21831 TAIDILTTV True PC9_epitope_Rep1 945.5382627418501 945.53716993586 88.782 2 0.07518144709641174 0.0034407427635172036 0.01644368948524986 ['ENSG00000198700|ENST00000361565|IPO9'] 102941 11392 SPDVQPISA True PC9_epitope_Rep5 912.4552613938798 912.45416993586 48.817 2 0.0751785440292309 0.0034407427635172036 0.016444731047085163 ['nc|ENSG00000155903|Q15283|RASA2', 'ENSG00000155903|ENST00000286364|RASA2', 'RASA2|p.T476Lfs*2|1|0.15|ENSG00000155903|chr3:141574006-141574006|C/-|frameshift_variant'] 106840 7557 SVASISLTK True NCI_RA007_Epitope_Rep2 904.52294703088 904.52184993586 34.02 2 0.07517233873467764 0.0034407427635172036 0.016446957587328354 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 6905 14706 AQIEVVPSA True PC9_epitope_Rep5 912.4916469025999 912.49109496793 61.571 1 0.07517042496459421 0.0034407427635172036 0.016447644329504112 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 88028 13967 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 58.747 2 0.07515707671972911 0.0034407427635172036 0.016452434990514294 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 104506 19860 SQMPTVIYV True PC9_epitope_Rep4 1036.5263181591597 1036.5252299358601 84.522 2 0.07515680624637507 0.0034407427635172036 0.01645253207633996 ['ENSG00000121931|ENST00000369763|LRIF1'] 48196 15177 IYPTAPPRF True PC9_epitope_Rep1 1060.5705659296398 1060.56946993586 63.199 2 0.07514664460886783 0.0034407427635172036 0.016456179960613337 ['nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 47750 19076 IYEIIDNSQGF True PC9_epitope_Rep6 1297.6190322436898 1297.61792993586 86.021 2 0.07514188078502786 0.0034407427635172036 0.01645789036528833 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 91654 15435 RISLPLPNF True NCI_RA007_Epitope_Rep4 1055.61276509479 1055.6116699358602 67.04 2 0.07514012304619173 0.0034407427635172036 0.016458521506141438 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 111313 13717 THMTAIVGM True PC9_epitope_Rep2 959.4568587003499 959.45576993586 58.053 2 0.07513797902683554 0.0034407427635172036 0.016459291376953313 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 7081 11094 AQSESILKV True PC9_epitope_Rep2 973.54441075145 973.54330993586 47.998 2 0.07513613016468715 0.0034407427635172036 0.016459955290138745 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 138650 19451 YIGPVLVSV True PC9_epitope_Rep6 945.55351888317 945.55242993586 87.482 2 0.0751341842082286 0.0034407427635172036 0.016460654096126386 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 1752 10418 AEGRIIWPA True H1975_Epitope_Rep2 1011.5501648382299 1011.54906993586 45.086 2 0.07513097390153364 0.0034407427635172036 0.016461806999112736 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 96927 12084 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 51.524 2 0.07511742074601842 0.0034407427635172036 0.016466675111466746 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 49454 13617 KEYFGIVSV True NCI_RA007_Epitope_Rep5 1040.5542471591598 1040.5531499358601 59.063 2 0.07511582088001838 0.0034407427635172036 0.016467249850384544 ['ENSG00000055211|ENST00000367419|GINM1'] 134792 20046 VYTVVDEMF True PC9_epitope_Rep6 1101.5052483614097 1101.5041499358601 89.773 2 0.07510892288669042 0.003467103467103467 0.01646972811252945 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 120672 12337 VEIPDPVEA True H1975_Epitope_Rep1 967.4862271689899 967.4856749679301 52.484 1 0.07510865070989688 0.003467103467103467 0.016469825905398323 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 141665 22346 YTTDFIYQL True PC9_epitope_Rep1 1162.55464108198 1162.5540749679299 90.768 1 0.07509367679600368 0.003467103467103467 0.016475206851729388 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 131075 9403 VTDTALAY True H1975_Epitope_Rep2 852.4228986364401 852.42235496793 41.133 1 0.07507750314503484 0.003467103467103467 0.016481020767696117 ['nc|ENSG00000127585|Q8N461-2|FBXL16', 'ENSG00000127585|ENST00000397621|FBXL16'] 17303 13410 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 63.258 2 0.07507600543208372 0.003467103467103467 0.016481559244737737 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 120412 5581 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 26.471 2 0.07505125329654973 0.003467103467103467 0.016490460823389362 ['ENSG00000171316|ENST00000423902|CHD7'] 28191 14777 FREDQIYRI True PC9_epitope_Rep1 1238.64077074778 1238.6396699358602 61.66 2 0.07505028830614703 0.003467103467103467 0.01649080795226767 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 39244 18547 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58057496793 76.364 1 0.07504563976183719 0.003467103467103467 0.016492480234122562 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 140162 10862 YQTEIGQTL True NCI_RA007_Epitope_Rep5 1051.51858992643 1051.51748993586 48.417 2 0.07504522058149801 0.003467103467103467 0.01649263103912632 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 73476 17855 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep4 989.5467196310099 989.54562993586 77.306 2 0.07502734409823884 0.003467103467103467 0.0164990635066743 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 2486 11170 AEQLSLVQA True H1975_Epitope_Rep2 957.5131106231698 957.51200993586 48.002 2 0.07501746946815152 0.0034924965893587995 0.016502617680843334 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15'] 69626 13097 LVDPSVYGY True H1975_Epitope_Rep2 1011.49131254943 1011.49020993586 55.503 2 0.07501691033674181 0.0034924965893587995 0.016502818950247602 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'FUBP3|p.Q67Sfs*2|1|0.33|ENSG00000107164|chr9:130609961-130609961|C/-|frameshift_variant'] 48327 15640 IYSEVATLI True NCI_RA007_Epitope_Rep4 1007.55391280599 1007.55280993586 67.935 2 0.07501478794539583 0.0034924965893587995 0.0165035829639716 ['nc|ENSG00000078674|Q15154-2|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1'] 73423 23394 MTVDDLLSL True PC9_epitope_Rep3 1005.5052483614099 1005.50414993586 95.266 2 0.075012500100567 0.0034924965893587995 0.016504406574146306 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 122219 12518 VGAPKIPSV True PC9_epitope_Rep2 866.5225531080599 866.52144993586 53.458 2 0.07500890934207073 0.0034924965893587995 0.01650569930243348 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 2288 11930 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 50.967 2 0.07498396916929201 0.0034924965893587995 0.016514680749216637 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 26961 11883 FLDTNETPY True H1975_Epitope_Rep3 1098.48695544498 1098.4858499358602 50.858 2 0.07497383552361607 0.0034924965893587995 0.016518331373828795 ['ENSG00000079246|ENST00000392132|XRCC5'] 89210 14185 QVTNEFQTV True PC9_epitope_Rep2 1064.51383889916 1064.51274993586 59.831 2 0.07496136737642864 0.0034924965893587995 0.01652282402830614 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 116674 8510 TVAVPLVGK True NCI_RA007_Epitope_Rep5 882.5538532363399 882.55274993586 39.418 2 0.07494726877019171 0.0034924965893587995 0.016527905557096535 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 97728 10512 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 45.454 1 0.07492941271707285 0.0034924965893587995 0.016534343461667066 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ZNF451|p.H887Qfs*4|1|0.08|ENSG00000112200|chr6:57150770-57150773|ATAT/-|frameshift_variant', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 64016 18588 LPAAMPITA True PC9_epitope_Rep3 883.48372507119 883.48262993586 76.724 2 0.07492690388464152 0.0034924965893587995 0.01653524819477544 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2'] 107319 14003 SVLEPPLFLK True NCI_RA007_Epitope_Rep3 1141.6746966450098 1141.67358993586 62.388 2 0.07491852763130202 0.0034924965893587995 0.016538269166158283 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 76679 21566 NQSELAVLL True PC9_epitope_Rep1 985.5444107514498 985.5438649679301 87.774 1 0.07491686383822599 0.0034924965893587995 0.016538869289297667 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 73195 15047 MRYVASYL True PC9_epitope_Rep4 1001.5004377644898 1001.49934993586 65.81 2 0.07491186823618548 0.0034924965893587995 0.016540671303652908 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 14088 9333 DRTGTGTLSV True PC9_epitope_Rep3 1005.50908787189 1005.50798993586 40.839 2 0.0749113522098671 0.0034924965893587995 0.01654085745516008 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 22348 5268 ETDRGMSAEY True H1975_Epitope_Rep3 1157.46590273057 1157.4653749679298 25.346 1 0.07489709017579572 0.0034924965893587995 0.016546003117805994 ['ENSG00000100347|ENST00000350028|SAMM50'] 55244 16726 LADIVTELY True H1975_Epitope_Rep2 1035.54882742555 1035.5477299358602 69.573 2 0.07489504524087394 0.0034924965893587995 0.01654674104106997 ['nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'ENSG00000198718|ENST00000361462|TOGARAM1'] 25555 12996 FEIQGTTVP True H1975_Epitope_Rep2 990.5022115863 990.50110993586 55.107 2 0.07488161177167617 0.0034924965893587995 0.01655158932576339 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 7566 12305 ASETAGSGFLY True H1975_Epitope_Rep3 1101.49785448185 1101.49727496793 52.512 1 0.07487537755801967 0.0034924965893587995 0.016553839770179837 ['ENSG00000170832|ENST00000300896|USP32', 'ENST00000587651.1_1_17:58296950-58303472:-|nuORF'] 72035 9433 METPSIAA True H1975_Epitope_Rep2 818.3844049527398 818.38385496793 41.251 1 0.07487033201636054 0.0034924965893587995 0.016555661332843443 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 43669 11820 IHDGLTVHL True PC9_epitope_Rep2 1003.54507945779 1003.5439899358599 50.795 2 0.07486788626170941 0.0035043872755426368 0.016556544376595775 ['ENSG00000135018|ENST00000376395|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1', 'UBQLN2|p.H90N|1|0.53|ENSG00000188021|chrX:56564141-56564141|C/A|missense_variant'] 76329 19219 NPTLILAA True PC9_epitope_Rep2 811.4803539429099 811.47980496793 79.298 1 0.07486690717340841 0.0035043872755426368 0.016556897890328038 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 96909 14303 SAVGQFVSL True NCI_RA007_Epitope_Rep4 906.4810822188999 906.47998993586 62.318 2 0.07485902787700727 0.0035043872755426368 0.01655974307790971 ['BRF1|p.L343Pfs*104|1|0.45|ENSG00000185024|chr14:105226091-105226092|-/A|frameshift_variant', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1', 'nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1'] 85120 20371 QELLYVVPFVA True H1975_Epitope_Rep2 1276.70672504928 1276.70562993586 84.416 2 0.07485884144041662 0.0035043872755426368 0.016559810405049308 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 104089 15875 SQDVTTVTL True PC9_epitope_Rep5 962.4920408254201 962.4914949679301 66.055 1 0.07485658398407644 0.0035043872755426368 0.01656062565192089 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF'] 88556 8028 QTDGTLTY True H1975_Epitope_Rep2 897.40797684829 897.4074249679301 35.828 1 0.0748516287917199 0.0035043872755426368 0.016562415277113298 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'ATP11C|p.T977Lfs*10|1|0.31|ENSG00000101974|chrX:139745767-139745767|C/-|frameshift_variant'] 73162 8372 MRSPQMVSA True PC9_epitope_Rep5 1005.47357139365 1005.47246993586 37.145 2 0.0748502757845907 0.0035043872755426368 0.016562903962610384 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 128742 5520 VPYGVGKAA True PC9_epitope_Rep4 860.4756029156398 860.4745099358599 27.994 2 0.07483518196109233 0.0035043872755426368 0.01656835653087252 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 6870 18159 AQIDGTLSTI True PC9_epitope_Rep2 1017.5342399905701 1017.53314993586 75.153 2 0.07483043318064435 0.0035043872755426368 0.016570072349479745 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 49183 4560 KEMELPAKEA True H1975_Epitope_Rep2 1144.5798102839997 1144.5781649037901 22.647 3 0.0748286552047385 0.0035043872755426368 0.01657071480625555 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 17242 13265 EHAEALLL True PC9_epitope_Rep6 894.4810822188999 894.47998993586 62.675 2 0.07481494156488665 0.0035043872755426368 0.01657567089469068 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 115226 12180 TRDVVHLDL True PC9_epitope_Rep4 1066.5771078620598 1066.5760099358602 54.667 2 0.07481385585635565 0.0035043872755426368 0.016576063327011115 ['ENSG00000164543|ENST00000319357|STK17A'] 40402 7717 HQVPAVSSV True PC9_epitope_Rep1 922.4872302285 922.48612993586 34.503 2 0.07480719600124881 0.0035043872755426368 0.01657847073905275 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 134287 9502 VYNPTPNSL True NCI_RA007_Epitope_Rep4 1003.49746055903 1003.49636993586 43.4 2 0.07479995850606087 0.0035043872755426368 0.016581087326003906 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 142820 16697 YYSPHGHILVL True PC9_epitope_Rep5 1297.68190728377 1297.68025490379 69.229 3 0.07478924773435285 0.0035043872755426368 0.016584960319159053 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 54299 7329 KYAHMINGF True NCI_RA007_Epitope_Rep3 1079.52223583823 1079.52112993586 35.952 2 0.07478876841122754 0.0035043872755426368 0.016585133661099035 ['ENSG00000035687|ENST00000366535|ADSS2'] 115586 6468 TRSTFSTNY True PC9_epitope_Rep6 1075.49343780775 1075.4923499358601 33.52 2 0.07478826217221768 0.0035043872755426368 0.016585316738703382 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 141707 13268 YTVENLIRI True NCI_RA007_Epitope_Rep5 1119.62880908175 1119.6277099358601 57.715 2 0.07477976422322455 0.0035043872755426368 0.016588390240036117 ['LILRA6|p.M451I|1|0.41|ENSG00000244482|chr19:54239046-54239046|C/A|missense_variant', 'LILRA2|p.M453I|1|0.26|ENSG00000239998|chr19:54587253-54587253|G/T|missense_variant'] 57569 9708 LEDSPVISA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 42.325 1 0.07477121016061186 0.0035043872755426368 0.016591484571550876 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 2261 7647 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.43850993586 34.392 2 0.07476939660736785 0.0035043872755426368 0.016592140672103937 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 34724 5390 GQEDHYNNL True PC9_epitope_Rep4 1088.45230127176 1088.45120993586 27.461 2 0.07476809623175981 0.0035043872755426368 0.01659261113202051 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 54504 12715 KYIDQKFVL True PC9_epitope_Rep6 1152.6542955536 1152.6531899358602 60.389 2 0.07476672737397004 0.0035043872755426368 0.01659310638135938 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 71956 13416 MESPFITSP True H1975_Epitope_Rep2 1007.46338354943 1007.46287496793 56.74 1 0.07476556457528724 0.0035043872755426368 0.016593527089831417 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 40365 17975 HQSGIVQLL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 73.933 2 0.0747594998927475 0.0035043872755426368 0.016595721494110822 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 125199 13909 VIIEKTYSL True PC9_epitope_Rep4 1064.61176203528 1064.6106699358602 61.405 2 0.07475888902341665 0.0035043872755426368 0.01659594254196382 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 138775 15598 YITERIIAV True PC9_epitope_Rep6 1076.62299542532 1076.62188993586 72.204 2 0.07475879009063507 0.0035043872755426368 0.01659597834182366 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 65590 15988 LRVGEPVAL True PC9_epitope_Rep3 952.5705659296398 952.56946993586 66.642 2 0.07475266773242192 0.0035043872755426368 0.016598193920883138 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 72787 21634 MPALGWAVA True PC9_epitope_Rep5 914.4684093602199 914.46786496793 88.258 1 0.07474747599095052 0.0035043872755426368 0.016600072940953906 ['AOC1|p.P703Qfs*12|1|0.24|ENSG00000002726|chr7:150861059-150861059|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 39049 11252 HHSGNTYFL True PC9_epitope_Rep5 1074.48829285766 1074.4871899358602 48.271 2 0.0747465721390952 0.0035043872755426368 0.01660040008759751 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 121860 16965 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 70.417 2 0.07474411108962663 0.0035043872755426368 0.016601290887954975 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 4341 16494 AIKEILTQV True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 68.443 2 0.07473351329406949 0.0035043872755426368 0.016605127369447192 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1'] 95894 20988 RYLDLFTNF True PC9_epitope_Rep4 1187.59750895347 1187.59640993586 88.891 2 0.0747288946849708 0.0035043872755426368 0.016606799598676673 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.Y111*|1|0.1|ENSG00000100196|chr22:38479732-38479733|AC/-|frameshift_variant'] 65813 17678 LSDIYIIPPAY True H1975_Epitope_Rep2 1263.67509056783 1263.6739899358602 73.32 2 0.07472270558049796 0.0035043872755426368 0.01660904069244779 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 1878 9761 AEIEETLQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48637496793 42.476 1 0.07471388700676167 0.0035043872755426368 0.01661223441126922 ['ENSG00000176903|ENST00000316836|PNMA1'] 107454 22517 SVLVNDFFL True PC9_epitope_Rep4 1052.55424715916 1052.5531499358601 94.843 2 0.07469450287433915 0.0035043872755426368 0.016619256542352363 ['ENSG00000104408|ENST00000220849|EIF3E'] 98243 15045 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48597496793 63.021 1 0.07468089461693762 0.0035043872755426368 0.016624187944344983 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 28587 7692 FSGGFGAR True PC9_epitope_Rep5 797.3820368839699 797.38092993586 34.531 2 0.0746791840650177 0.0035043872755426368 0.01662480791570278 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 36641 14530 GVIDLVFEK True NCI_RA007_Epitope_Rep4 1018.5698972233 1018.56880993586 63.263 2 0.07467211828232577 0.0035043872755426368 0.016627369061481215 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 12462 18404 DIYLPIANVA True H1975_Epitope_Rep2 1087.59136094387 1087.59026993586 76.342 2 0.0746583986777669 0.0035043872755426368 0.016632343077365868 ['ENSG00000120837|ENST00000240055|NFYB'] 3193 11420 AGEGLLAVQ True NCI_RA007_Epitope_Rep3 856.4654321547598 856.4648849679301 52.046 1 0.07465350174713516 0.0035043872755426368 0.016634118785240553 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 40548 9157 HRFPTVAV True PC9_epitope_Rep4 925.5133854066898 925.5122899358599 42.815 2 0.07465305386024132 0.0035043872755426368 0.01663428120522454 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 104202 11510 SQFSYQHAI True PC9_epitope_Rep2 1079.5036085686302 1079.5025099358602 49.597 2 0.07464874344194171 0.0035043872755426368 0.016635844394202903 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF', 'ENST00000517974.1_1_8:117671049-117768052:-|nuORF'] 96859 4836 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 26.108 2 0.07464573266826784 0.0035043872755426368 0.016636936343369456 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 121707 18609 VFLENVIR True PC9_epitope_Rep3 988.5705659296399 988.56946993586 76.801 2 0.07463664212192885 0.0035043872755426368 0.01664023371269831 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 105548 4861 SSDANPVRY True H1975_Epitope_Rep2 1007.4672230599099 1007.46612993586 23.786 2 0.07463370714818544 0.0035043872755426368 0.01664129843117667 ['ENSG00000112159|ENST00000369393|MDN1'] 9179 11346 AVLPRLHQL True PC9_epitope_Rep4 1045.63964854897 1045.63854993586 51.419 2 0.07463220264642094 0.0035043872755426368 0.01664184424285589 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000463906.1_1_1:43630116-43636618:-|nuORF'] 2725 11391 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.47964993586 48.865 2 0.07461950290661537 0.0035043872755426368 0.016646452190157143 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 18407 20935 EIVTTIPTI True PC9_epitope_Rep2 985.56956287013 985.56901496793 85.974 1 0.07461484360510022 0.0035043872755426368 0.016648143059087125 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 21671 16342 ERSGLQLSL True PC9_epitope_Rep5 1001.5505587610498 1001.54946993586 67.857 2 0.07460369762545901 0.0035043872755426368 0.0166521886035514 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 127667 10406 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 44.911 2 0.07459578883781649 0.0035043872755426368 0.016655059731588547 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 54143 17481 KVPEWVDTV True PC9_epitope_Rep5 1071.5600608155898 1071.5589699358602 72.242 2 0.07459378580055828 0.0035043872755426368 0.01665578696750799 ['ENSG00000105372|ENST00000598742|RPS19'] 26885 16613 FLDGNELTL True NCI_RA007_Epitope_Rep2 1020.51277627 1020.51227496793 69.352 1 0.07458455662631747 0.0035043872755426368 0.01665913815403789 ['ENSG00000213719|ENST00000375784|CLIC1'] 96753 20509 SAMEVVPAL True PC9_epitope_Rep5 915.4735543103099 915.47300496793 83.929 1 0.07458156212164252 0.0035043872755426368 0.01666022561726176 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 134500 11354 VYQGHTALL True PC9_epitope_Rep5 1000.5341804209199 1000.53308993586 48.669 2 0.07457916842399769 0.0035043872755426368 0.01666109494312936 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 35058 9436 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 41.234 2 0.07457636520808028 0.0035043872755426368 0.016662113048539005 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 88591 19702 QTDPTLLSV True PC9_epitope_Rep1 972.5127762699999 972.51222496793 80.609 1 0.07457492960815047 0.0035043872755426368 0.016662634469262833 ['ENSG00000144867|ENST00000678299|SRPRB'] 26276 19583 FHFTTPAL True PC9_epitope_Rep3 932.4756029156399 932.4745099358599 80.562 2 0.07456911387669661 0.0035043872755426368 0.01666474694210677 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 100286 8779 SKAPVLTY True PC9_epitope_Rep4 877.49091862661 877.48982993586 41.28 2 0.07456776371305415 0.0035043872755426368 0.0166652374034159 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1'] 76616 19609 NQPGVLIQV True PC9_epitope_Rep5 966.5498304850599 966.54928496793 80.478 1 0.0745647631109714 0.0035043872755426368 0.016666327452133086 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 73902 14940 NAVYTFETL True NCI_RA007_Epitope_Rep4 1056.51277627 1056.51166993586 64.932 2 0.07456415625794856 0.0035043872755426368 0.016666547915738735 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 142843 20058 YYTDIMHTL True PC9_epitope_Rep1 1155.5270464351497 1155.52647496793 81.979 1 0.07454287839139759 0.0035043872755426368 0.016674279666268988 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 111137 10532 THFHELTAL True PC9_epitope_Rep6 1067.53999407735 1067.5388899358602 51.301 2 0.07453572809590002 0.0035043872755426368 0.01667687862216694 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 98916 16144 SHADVVNLL True PC9_epitope_Rep2 966.51344497634 966.51234993586 67.354 2 0.07453055468533207 0.0035043872755426368 0.016678759264145148 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 114630 19263 TQDTPIPAL True PC9_epitope_Rep5 954.5022115862998 954.50110993586 79.137 2 0.07452860615677422 0.0035043872755426368 0.016679467645810298 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 54355 8158 KYEELQIT True NCI_RA007_Epitope_Rep4 1022.5284263341399 1022.5273299358599 38.169 2 0.07451728520544577 0.0035043872755426368 0.01668358389713545 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 68952 8210 LTPEELER True PC9_epitope_Rep2 985.5080252427299 985.50692993586 36.938 2 0.07451563119994921 0.0035043872755426368 0.01668418536583691 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 96430 17025 SAAFPGASL True PC9_epitope_Rep4 819.41266830591 819.41156993586 73.48 2 0.07451313908368395 0.0035043872755426368 0.016685091646342277 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 22325 10610 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.49727496793 45.834 1 0.07450831945136221 0.0035043872755426368 0.016686844478925426 ['ENSG00000150787|ENST00000280362|PTS'] 21896 13807 ESDLDYIQY True H1975_Epitope_Rep3 1144.4924347482402 1144.49187496793 58.414 1 0.07450762748719678 0.0035043872755426368 0.01668709615063482 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 84236 16680 PYMANVYLI True NCI_RA007_Epitope_Rep3 1082.5470536037399 1082.54594993586 73.419 2 0.07449993736884314 0.0035043872755426368 0.01668989333261127 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2', 'ENST00000478436.1_1_3:145795570-145803239:-|nuORF'] 17369 14846 EHDGSLFQAV True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 65.045 2 0.07448684353403506 0.0035043872755426368 0.01669465705073843 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 95199 11673 RVIGTLEEV True PC9_epitope_Rep6 1014.57095985246 1014.56986993586 56.03 2 0.07447572403474183 0.0035043872755426368 0.016698703471351762 ['ENSG00000100401|ENST00000356244|RANGAP1'] 7984 19731 ATDFGEALV True PC9_epitope_Rep2 921.4443623570098 921.44326993586 81.286 2 0.07447274738039257 0.0035043872755426368 0.0166997868399746 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 43778 18196 IHNGVIAVF True PC9_epitope_Rep1 968.5443511817999 968.54324993586 74.781 2 0.07445821527407742 0.0035043872755426368 0.016705076813384605 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000459857.5_1_22:45072965-45122509:+|nuORF', 'ENST00000492289.5_1_22:45073049-45126704:+|nuORF', 'ENST00000477331.5_1_22:45098405-45122466:+|nuORF'] 85390 15619 QEVFPVLAA True H1975_Epitope_Rep2 972.5280324113197 972.52692993586 65.235 2 0.07445545221188767 0.0035043872755426368 0.016706082798869315 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP'] 40567 6988 HRGTGIAL True PC9_epitope_Rep3 823.46643521427 823.46532993586 31.891 2 0.07445115041458353 0.0035043872755426368 0.016707649124650996 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 136835 14753 YADGESFLGY True H1975_Epitope_Rep1 1120.4713053808398 1120.4707749679299 61.971 1 0.07444037386642022 0.0035043872755426368 0.01671157356923384 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 58570 11391 LEQNIQLPA True H1975_Epitope_Rep3 1024.5553097883198 1024.5542099358602 48.929 2 0.07443450489302601 0.0035043872755426368 0.01671371120612612 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 108613 19971 SYPKIIEEF True PC9_epitope_Rep1 1124.57537652656 1124.57426993586 81.643 2 0.07442545082578252 0.0035043872755426368 0.016717009438098063 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-4|FANCD2'] 7252 17333 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.52387496793 71.846 1 0.07442071364726141 0.0035043872755426368 0.016718735347266082 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 110369 7753 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 34.806 1 0.07441953330827002 0.0035043872755426368 0.016719165409180576 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 139095 15942 YLDIGQVYY True H1975_Epitope_Rep3 1132.54407639828 1132.5429699358601 66.774 2 0.074414242355603 0.0035043872755426368 0.016721093318442286 ['ENSG00000006555|ENST00000371276|TTC22'] 97837 11995 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42760993586 51.22 2 0.07441345036161084 0.0035043872755426368 0.016721381921796282 ['ENSG00000126247|ENST00000246533|CAPNS1'] 97946 10410 SENPSVYVP True H1975_Epitope_Rep1 990.4658260775799 990.4652749679301 44.994 1 0.07441174525769852 0.0035043872755426368 0.01672200327898668 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 2078 15243 AELEFAIQP True H1975_Epitope_Rep2 1016.5178616504397 1016.51676993586 63.79 2 0.0744022753042984 0.0035043872755426368 0.016725454617083663 ['ENSG00000092820|ENST00000367075|EZR', 'ENST00000476189.1_1_6:159209469-159239197:-|nuORF', 'ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENSG00000147065|ENST00000360270|MSN', 'MSN|p.E366Kfs*59|1|0.32|ENSG00000147065|chrX:65737182-65737182|G/-|frameshift_variant'] 139204 13859 YLETVAAYY True H1975_Epitope_Rep3 1091.51752729727 1091.5169749679299 58.617 1 0.07439302709193601 0.0035043872755426368 0.016728825780773542 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 89793 16570 RALDVNVAL True PC9_epitope_Rep5 969.5607295219299 969.55962993586 68.741 2 0.07438920479965933 0.0035043872755426368 0.016730219269516625 ['nc|ENSG00000114115|P09455|RBP1', 'nc|ENSG00000114115|P09455-2|RBP1', 'nc|ENSG00000114115|P09455-3|RBP1', 'ENSG00000114115|ENST00000672186|RBP1'] 90451 6360 REIVMTQSP True NCI_RA007_Epitope_Rep4 1059.5382798251899 1059.5371899358602 31.068 2 0.0743881933581912 0.0035043872755426368 0.016730588027643954 ['nc|ENSG00000243063|A0A075B6H7|IGKV3-7'] 32914 18228 GHVVDIVAL True PC9_epitope_Rep5 921.52836676449 921.52726993586 75.126 2 0.0743872338333662 0.0035043872755426368 0.016730937864640076 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 7517 7696 ASDPGTATF True H1975_Epitope_Rep2 865.38176210045 865.3812149679301 34.557 1 0.07438252614762868 0.0035043872755426368 0.016732654357200703 ['nc|ENSG00000008441|Q14938-6|NFIX', 'nc|ENSG00000008441|Q14938-5|NFIX', 'nc|ENSG00000008441|Q14938-3|NFIX'] 115605 9956 TRTSSVVTL True PC9_epitope_Rep3 962.53965972418 962.53856993586 43.251 2 0.07437804755848647 0.0035043872755426368 0.01673428746974062 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 28517 9517 FSEEGAVGY True H1975_Epitope_Rep3 957.4079768482898 957.4074249679301 41.612 1 0.07437623343026467 0.0035043872755426368 0.016734949031759986 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 134634 16707 VYSPLGSAYKL True PC9_epitope_Rep6 1196.6441247927198 1196.64302993586 76.738 2 0.07437447527657624 0.0035043872755426368 0.01673559020463645 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000514806.5_1_5:54965038-54993786:-|nuORF'] 115210 10714 TRDSNIIRL True PC9_epitope_Rep1 1086.61455599994 1086.6134499358602 46.099 2 0.07436812027253668 0.0035043872755426368 0.01673790797199529 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS'] 6133 14693 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 61.52 2 0.0743501555174732 0.0035043872755426368 0.016744461608352162 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 119310 17608 VAMLPGLAL True NCI_RA007_Epitope_Rep3 883.5201105799099 883.51956496793 77.216 1 0.0743369952981216 0.0035043872755426368 0.016749264039378643 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 93076 13903 RPNDIMAEV True PC9_epitope_Rep5 1043.50697969691 1043.50588993586 58.498 2 0.07433487011021896 0.0035043872755426368 0.01675003968367852 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 90127 4543 RECTIEATA True NCI_RA007_Epitope_Rep5 992.4596951513198 992.45858993586 24.131 2 0.07432671359663989 0.0035043872755426368 0.016753016932128155 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 40276 16710 HQLESILAM True PC9_epitope_Rep6 1040.5324661687598 1040.53136993586 76.75 2 0.07432455445642373 0.0035043872755426368 0.016753805132713188 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 24394 19664 FAAPEKDIFL True PC9_epitope_Rep2 1149.60701100801 1149.6059099358602 81.022 2 0.07431268690243839 0.0035043872755426368 0.016758138034492037 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 63907 8775 LNQDQLDAVSK True PC9_epitope_Rep2 1229.62518025329 1229.6240899358602 39.108 2 0.07431031335092608 0.0035043872755426368 0.01675900475475956 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 8287 18725 ATIGELAQV True PC9_epitope_Rep5 900.4916469025999 900.49054993586 77.042 2 0.07430684590398942 0.0035043872755426368 0.01676027099413846 ['ENSG00000198793|ENST00000361445|MTOR'] 105999 13819 SSVATVVYL True H1975_Epitope_Rep3 937.5120479940099 937.51149496793 58.46 1 0.07430312713517896 0.0035043872755426368 0.016761629109906948 ['ENSG00000132383|ENST00000254719|RPA1'] 1169 7101 AEAPPSVAP True H1975_Epitope_Rep3 837.4232329896099 837.42212993586 32.284 2 0.0743008459154255 0.0035043872755426368 0.01676246227513304 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 134850 8629 VYVERAEVL True NCI_RA007_Epitope_Rep3 1076.5866099165999 1076.58550993586 41.017 2 0.07429635103415184 0.0035043872755426368 0.016764104044135603 ['ENSG00000089234|ENST00000419234|BRAP'] 75037 13285 NHSGAVVLL True PC9_epitope_Rep3 908.50796567308 908.50686993586 56.136 2 0.07429372248423888 0.0035043872755426368 0.01676506419924567 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'ITGA6|p.G477Efs*22|1|0.1|ENSG00000091409|chr2:172476437-172476437|G/-|frameshift_variant', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 104668 14731 SQTLVSQGL True PC9_epitope_Rep3 931.4974605590301 931.49636993586 61.8 2 0.0742902870974384 0.0035043872755426368 0.01676631915233768 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 65843 17010 LSDLGLLSY True H1975_Epitope_Rep2 979.52261267771 979.5220649679301 70.683 1 0.0742894783133342 0.0035043872755426368 0.01676661461535669 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 90996 16628 RFEEAHFTF True PC9_epitope_Rep5 1182.5458077337796 1182.54415490379 68.966 3 0.07428762789347182 0.0035043872755426368 0.016767290624399873 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 134485 11764 VYPSSLSKI True PC9_epitope_Rep4 992.5542471591599 992.55314993586 53.016 2 0.07428505269875199 0.0035043872755426368 0.016768231455726052 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 24398 20149 FAAPLILL True H1975_Epitope_Rep1 856.54222592348 856.54167496793 83.853 1 0.07428103239079542 0.0035043872755426368 0.016769700348304425 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 12771 20160 DLENAFLNL True H1975_Epitope_Rep3 1047.52367530687 1047.52256993586 84.336 2 0.07427271566753922 0.0035043872755426368 0.01677273939410701 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 102868 12423 SPAAPVITA True PC9_epitope_Rep5 825.45961849833 825.4590749679301 52.784 1 0.07426121588931311 0.0035043872755426368 0.016776942415941794 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 111520 12570 TIAEGFVKA True PC9_epitope_Rep5 934.5123823471798 934.51128993586 53.35 2 0.07426049376341892 0.0035043872755426368 0.016777206376397482 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 141798 20433 YVDDFGVSV True PC9_epitope_Rep2 999.4549270407099 999.4543749679301 84.022 1 0.07425918951186346 0.0035043872755426368 0.01677768313246565 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 48251 13034 IYQKPFQTL True PC9_epitope_Rep4 1136.62299542532 1136.62188993586 58.028 2 0.07425798571514818 0.0035043872755426368 0.01677812317945519 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 64987 12937 LQHEGIFRV True PC9_epitope_Rep1 1097.5981776598098 1097.5970899358601 54.635 2 0.07425247759080836 0.0035043872755426368 0.01678013680709866 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ENST00000494397.5_1_X:153175958-153178171:-|nuORF', 'ENST00000470209.5_1_X:153173185-153178999:-|nuORF', 'ENST00000404127.6_1_X:153173185-153186849:-|nuORF', 'ENSG00000266028|ENST00000573034|SRGAP2'] 86072 10848 QHSISYTL True PC9_epitope_Rep2 947.47124581119 947.47014993586 47.044 2 0.0742494200835103 0.0035043872755426368 0.0167812546495931 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3', 'ENSG00000139946|ENST00000267460|PELI2', 'ENSG00000197329|ENST00000358912|PELI1'] 73298 18924 MTDLYPPELF True H1975_Epitope_Rep2 1224.5736622744 1224.5725699358602 78.559 2 0.07424781206067121 0.0035043872755426368 0.016781842579904088 ['ENSG00000148291|ENST00000371964|SURF2'] 11634 18970 DGLAFNALIHR True PC9_epitope_Rep5 1225.6567551650899 1225.65511490379 77.992 3 0.07423976135228014 0.0035043872755426368 0.016784786392956528 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'SPTBN4|p.E981Rfs*3|1|0.25|ENSG00000160460|chr19:40519435-40519435|A/-|frameshift_variant', 'ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-4|SPTBN4', 'nc|ENSG00000160460|Q9H254-2|SPTBN4', 'SPTBN4|p.E1997Dfs*2|1|0.29|ENSG00000160460|chr19:40565498-40565498|G/-|frameshift_variant'] 32885 8871 GHSGPITSI True PC9_epitope_Rep3 867.4450310633501 867.44392993586 39.073 2 0.07421380320232587 0.0035043872755426368 0.016794281491636733 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 48416 13780 IYVNPANTHQF True PC9_epitope_Rep3 1302.6356853673399 1302.63458993586 58.084 2 0.07421340732403385 0.0035043872755426368 0.016794426336587554 ['ENSG00000132716|ENST00000368074|DCAF8'] 75214 13557 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 57.284 2 0.07421139902585779 0.0035043872755426368 0.01679516115569784 ['ENSG00000116285|ENST00000377482|ERRFI1'] 30123 15219 FYMDTSHLF True NCI_RA007_Epitope_Rep4 1159.5008316873098 1159.4997299358602 66.163 2 0.074205965932975 0.0035043872755426368 0.01679714922771356 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 31313 18649 GDLENAFLNL True H1975_Epitope_Rep3 1104.54513902744 1104.54457496793 78.198 1 0.07420334073294402 0.0035043872755426368 0.01679810991674041 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 8653 19642 AVAELNYGL True PC9_epitope_Rep2 948.4916469026 948.49109496793 80.938 1 0.07419523423954423 0.0035043872755426368 0.016801076801444458 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 92877 10487 RPFQGTMGV True PC9_epitope_Rep4 991.4909357099498 991.48982993586 48.054 2 0.07419063323511735 0.0035043872755426368 0.016802760933659743 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 35192 10818 GRADGYVL True PC9_epitope_Rep3 849.43446637965 849.43336993586 46.581 2 0.07418397769225442 0.0035043872755426368 0.01680519737820203 ['ENSG00000142937|ENST00000396651|RPS8'] 7089 13794 AQSGTIMAV True PC9_epitope_Rep5 876.43750315476 876.43640993586 58.078 2 0.07416442755555115 0.0035043872755426368 0.016812356143306596 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3', 'MAP2K3|p.M115Ifs*45|1|0.11|ENSG00000034152|chr17:21300939-21300939|G/-|frameshift_variant'] 31630 13240 GEFGGFGSV True NCI_RA007_Epitope_Rep4 855.3762827971899 855.37573496793 58.059 1 0.07416146710747873 0.0035043872755426368 0.016813440431600143 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 101810 11533 SLPEELQKC True PC9_epitope_Rep4 1045.51139637101 1045.51028993586 52.124 2 0.07415721780515203 0.0035043872755426368 0.016814996886936374 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 23846 21291 EYINFLENL True PC9_epitope_Rep6 1153.5655401188499 1153.56444993586 94.749 2 0.07414830192337235 0.0035043872755426368 0.016818263075369967 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 36138 19206 GVAPGFQVV True PC9_epitope_Rep2 872.4756029156399 872.4745099358599 79.249 2 0.07414570406082242 0.0035043872755426368 0.016819214871079926 ['ENSG00000165724|ENST00000298585|ZMYND19'] 82463 10985 PPQGQFLPP True NCI_RA007_Epitope_Rep4 979.5127167003499 979.51160993586 49.122 2 0.07414489005677784 0.0035043872755426368 0.016819513113312753 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF'] 32960 9658 GIDSSSPEV True PC9_epitope_Rep2 889.4028914678499 889.40234496793 42.489 1 0.0741347752573021 0.0035043872755426368 0.0168232194760641 ['ENSG00000169564|ENST00000303577|PCBP1'] 27809 8861 FQDDPHAGL True PC9_epitope_Rep4 998.4457593393398 998.44466993586 41.616 2 0.07413410905697887 0.0035043872755426368 0.016823463618289066 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 104335 7066 SQIQEFKEA True PC9_epitope_Rep6 1078.5294889632999 1078.52838993586 36.203 2 0.07412802552753969 0.0035043872755426368 0.016825693199819372 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 89573 4724 QYNPHVHQL True NCI_RA007_Epitope_Rep4 1134.55704112382 1134.55540490379 24.601 3 0.07412710983846306 0.0035043872755426368 0.016826028818834726 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 85448 8365 QEYSEFVKA True NCI_RA007_Epitope_Rep5 1099.5185899264297 1099.51748993586 38.848 2 0.07412647508529335 0.0035043872755426368 0.016826261472673288 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 114809 18913 TQLGPPYHILV True PC9_epitope_Rep4 1236.68665831104 1236.68556993586 80.836 2 0.07412401514516105 0.0035043872755426368 0.016827163134102017 ['ENSG00000119616|ENST00000341162|FCF1'] 99157 13774 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 58.001 2 0.07412399218186752 0.0035043872755426368 0.01682717155123233 ['ENSG00000132646|ENST00000379143|PCNA'] 29375 20762 FVDPAQITM True PC9_epitope_Rep1 1020.49501803088 1020.49447496793 84.689 1 0.07411706899173053 0.0035043872755426368 0.016829709405504115 ['ENSG00000167325|ENST00000300738|RRM1'] 9629 11863 AYAPPPHVI True PC9_epitope_Rep1 963.5178020807899 963.51670993586 50.496 2 0.07410472881742092 0.0035043872755426368 0.016834233862147847 ['ENSG00000128335|ENST00000358502|APOL2'] 96473 11428 SAAPAIQL True H1975_Epitope_Rep2 769.43340375049 769.4328549679301 49.01 1 0.0741004508610071 0.0035043872755426368 0.01683580261515339 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2'] 9930 16181 AYLSKAMEI True PC9_epitope_Rep5 1024.52631815916 1024.5252299358601 67.229 2 0.07408882485897941 0.0035043872755426368 0.016840066628428203 ['ENSG00000124784|ENST00000379834|RIOK1'] 90184 3152 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 16.602 2 0.07408681829751589 0.0035043872755426368 0.016840802666989802 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 14057 17268 DRNAVIVAL True PC9_epitope_Rep5 969.5607295219299 969.55962993586 71.432 2 0.07408522763413841 0.0035043872755426368 0.016841386168791217 ['nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 68954 7323 LTPEELER True PC9_epitope_Rep6 985.5080252427299 985.50692993586 37.339 2 0.07407932085095437 0.0035043872755426368 0.016843553113936243 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 37978 12898 HAGVISVL True PC9_epitope_Rep4 794.46503823194 794.46448496793 57.491 1 0.07407773528095579 0.0035043872755426368 0.01684413483562078 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 77658 18248 NTIDNFTHGL True PC9_epitope_Rep5 1130.5356369729 1130.53452993586 75.205 2 0.07406435075515963 0.0035043872755426368 0.016849046160350146 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 88128 8223 QRSDGPYAL True PC9_epitope_Rep4 1005.4879585044899 1005.48686993586 39.09 2 0.07406391916914798 0.0035043872755426368 0.016849204548895706 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 9443 14633 AVVESMVTA True PC9_epitope_Rep1 905.4528188657299 905.45172993586 61.109 2 0.07406288780838652 0.0035043872755426368 0.016849583055487987 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 5847 19431 APFLASAVSA True PC9_epitope_Rep1 932.4967322830399 932.49618496793 79.553 1 0.07405561832729246 0.0035043872755426368 0.016852251159488907 ['ENSG00000146242|ENST00000369750|TPBG'] 89089 17160 QVPDDLPNV True PC9_epitope_Rep4 995.4923751785899 995.49126993586 74.011 2 0.07405089947224934 0.0035043872755426368 0.016853983322224837 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 45448 17062 IQINVGTTV True PC9_epitope_Rep4 943.53384606775 943.53274993586 73.626 2 0.07404955171058886 0.0035043872755426368 0.01685447807908748 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 57823 8353 LEESSPIAA True H1975_Epitope_Rep3 915.4549270407099 915.4543749679301 37.114 1 0.07404905954737648 0.0035043872755426368 0.016854658753215488 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 25693 11094 FEQVSGVTV True H1975_Epitope_Rep3 964.4865615221598 964.48546993586 47.767 2 0.07404419121581879 0.0035043872755426368 0.016856446024742153 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 86010 14993 QHNDALTVTL True PC9_epitope_Rep5 1110.56693710118 1110.5658499358601 62.673 2 0.07403983988222583 0.0035043872755426368 0.016858043644066883 ['ENST00000426902.5_1_19:18273817-18280101:+|nuORF', 'ENSG00000105647|ENST00000222254|PIK3R2'] 48965 5478 KEERPPELP True H1975_Epitope_Rep2 1093.5767735088898 1093.57566993586 26.088 2 0.07402151086301244 0.0035043872755426368 0.016864774803435015 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 117086 22586 TVISILNTI True PC9_epitope_Rep3 972.58554728744 972.58444993586 92.148 2 0.07401431611642205 0.0035043872755426368 0.016867417689029836 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 8698 16363 AVANIVNSV True PC9_epitope_Rep3 885.49198125577 885.49088993586 68.076 2 0.07400621468598208 0.0035043872755426368 0.01687039409260825 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 118421 14757 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47107496793 61.762 1 0.07400071983146504 0.0035306898424769147 0.016872413138000093 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 21103 20718 ERADLIAYL True PC9_epitope_Rep1 1062.57095985246 1062.5698699358602 84.516 2 0.0739982735838023 0.0035306898424769147 0.016873312066644077 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 23960 23125 EYLPIGGLAEF True PC9_epitope_Rep5 1207.6124903112698 1207.6119749679299 93.937 1 0.07399460373360953 0.0035306898424769147 0.01687466071901328 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF'] 121386 6365 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51731496793 29.467 1 0.0739921150928236 0.0035306898424769147 0.016875575339598492 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 38534 4490 HESDINAVA True NCI_RA007_Epitope_Rep4 954.4406739589 954.43956993586 23.655 2 0.07398934059195253 0.0035306898424769147 0.016876595073271328 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 21931 11686 ESDVGVVVY True H1975_Epitope_Rep2 965.47057710485 965.46948993586 50.023 2 0.07397991087627567 0.0035306898424769147 0.016880061277475957 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 101795 9412 SLPDFPAAAK True NCI_RA007_Epitope_Rep4 1015.5338460677499 1015.53274993586 43.062 2 0.07397611414800287 0.0035306898424769147 0.016881457077515514 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'NLRC5|p.L1674Rfs*17|1|0.22|ENSG00000140853|chr16:57077960-57077960|T/-|frameshift_variant', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'ENST00000539881.5_1_16:57068826-57081664:+|nuORF', 'ENST00000538930.5_1_16:57075247-57096263:+|nuORF'] 66048 11753 LSEGVTISY True H1975_Epitope_Rep3 967.4862271689901 967.4856749679301 50.351 1 0.07397222971465622 0.0035306898424769147 0.016882885231809027 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 4330 5436 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 28.392 2 0.073958759925325 0.0035306898424769147 0.016887838416794317 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 132702 12731 VVHDGFEGL True PC9_epitope_Rep4 971.47124581119 971.47014993586 56.824 2 0.07395453859730655 0.0035486929432480023 0.01688939098472022 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 106271 7852 STESSVAVY True H1975_Epitope_Rep3 941.43419159613 941.43364496793 35.178 1 0.07393040891472454 0.0035486929432480023 0.016898268220254215 ['ENST00000411676.6_1_18:55274615-55283204:-|nuORF', 'ENSG00000134440|ENST00000256854|NARS1'] 85028 12557 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.5380449679301 53.345 1 0.07392534194589656 0.0035486929432480023 0.016900132893310688 ['ENSG00000139233|ENST00000266604|LLPH'] 74736 7037 NHANGLTL True PC9_epitope_Rep4 838.4297153523801 838.42860993586 34.319 2 0.0739244740768136 0.0035486929432480023 0.016900452293203343 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 129306 21490 VQWENSFVSV True PC9_epitope_Rep1 1193.57168812845 1193.57117496793 87.505 1 0.07392365575959792 0.0035486929432480023 0.01690075346177402 ['ENSG00000174231|ENST00000304992|PRPF8'] 26860 14749 FLDDSTALY True H1975_Epitope_Rep2 1043.48114178855 1043.48004993586 61.892 2 0.07390077789949304 0.0035486929432480023 0.016909175312001423 ['ENSG00000100558|ENST00000216446|PLEK2'] 105462 18258 SRVFSVAEL True PC9_epitope_Rep5 1006.5447451046199 1006.54364993586 75.243 2 0.07390011224678096 0.0035486929432480023 0.016909420411990703 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 1135 6262 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 29.035 2 0.07389393063732737 0.0035486929432480023 0.01691169670017378 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 118174 12304 TYISWKEEL True NCI_RA007_Epitope_Rep4 1167.58119018299 1167.58008993586 54.323 2 0.07388557761757093 0.0035486929432480023 0.0169147730312173 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 105303 18227 SRMPVSIDL True PC9_epitope_Rep5 1016.5324661687599 1016.53136993586 75.122 2 0.07388384351545549 0.0035486929432480023 0.016915411748339496 ['ENSG00000065526|ENST00000375759|SPEN'] 29148 20401 FTPDVKVWEV True PC9_epitope_Rep5 1218.62847472858 1218.62736993586 83.51 2 0.0738815393542932 0.0035486929432480023 0.016916260468444286 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 142490 22275 YYIEGIENSVF True PC9_epitope_Rep3 1332.62378327096 1332.62268993586 90.966 2 0.07387280106035045 0.0035486929432480023 0.01691947951173341 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 135979 21281 WQLLLPTAL True NCI_RA007_Epitope_Rep1 1053.62226714933 1053.62116993586 87.07 2 0.0738609249330756 0.0035486929432480023 0.016923855393757094 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 23820 11941 EYIKFLRSI True NCI_RA007_Epitope_Rep5 1167.6651945904698 1167.66355490379 52.587 3 0.07385994095472635 0.0035486929432480023 0.016924217997946734 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 45519 20028 IQPDNIVYV True PC9_epitope_Rep5 1059.56006081559 1059.5589699358602 82.089 2 0.07385570211807034 0.0035486929432480023 0.01692578012699483 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 11841 6192 DHHENKYLL True PC9_epitope_Rep2 1167.56727145435 1167.56563490379 29.209 3 0.07384447820421926 0.0035486929432480023 0.016929917098242042 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 70960 20014 LYGPSSVSF True PC9_epitope_Rep3 955.46509780159 955.46400993586 82.231 2 0.07384269023563292 0.0035486929432480023 0.016930576204204097 ['ENSG00000149257|ENST00000358171|SERPINH1'] 911 5258 ADLSGITK True H1975_Epitope_Rep1 803.43888305375 803.43778993586 25.287 2 0.07383482367561829 0.0035486929432480023 0.016933476368765375 ['CON__P34955', 'ENSG00000100665|ENST00000557004|SERPINA4'] 77284 17180 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.51837496793 71.37 1 0.07383391830796165 0.0035486929432480023 0.01693381018027149 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 6628 18517 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 76.015 2 0.07382635564993395 0.0035486929432480023 0.016936598791678675 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 45184 19528 IPQQVFQEV True PC9_epitope_Rep3 1086.57095985246 1086.5698699358602 80.345 2 0.07382571146693669 0.0035486929432480023 0.016936836343768934 ['ENSG00000179151|ENST00000315127|EDC3'] 90386 11205 REIALPIEA True H1975_Epitope_Rep2 1010.5760452328999 1010.57494993586 48.139 2 0.07381942778128736 0.0035486929432480023 0.01693915370902268 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'ENST00000576387.1_1_16:24960717-24966004:-|nuORF', 'nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1'] 110971 10692 THANALTVM True PC9_epitope_Rep1 956.4749512926401 956.47384993586 46.017 2 0.07381871492676029 0.0035486929432480023 0.01693941662180126 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 89147 12184 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.57528993586 51.855 2 0.0738185214015347 0.0035486929432480023 0.01693948799782462 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 114949 19741 TQVAIVNIL True PC9_epitope_Rep6 969.58588164061 969.58478993586 88.593 2 0.07381750828723661 0.0035486929432480023 0.016939861659461757 ['ENSG00000115084|ENST00000245680|SLC35F5'] 103931 17839 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51289496793 73.412 1 0.07381744289492996 0.0035486929432480023 0.016939885778026686 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 13945 6161 DRAPAQPAM True PC9_epitope_Rep5 955.45455020123 955.45344993586 28.682 2 0.07381307914956954 0.0035486929432480023 0.016941495325046612 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 129266 13479 VQVGETFKV True PC9_epitope_Rep2 1005.5494961318899 1005.54838993586 57.132 2 0.07381232274553816 0.0035486929432480023 0.016941774335580823 ['SMAD4|p.L540Pfs*10|1|0.09|ENSG00000141646|chr18:51078424-51078430|TACTTCA/-|frameshift_variant', 'ENSG00000141646|ENST00000342988|SMAD4'] 93564 9924 RQLPAMTAL True NCI_RA007_Epitope_Rep5 999.5535359665099 999.55242993586 44.815 2 0.07380976780083692 0.0035486929432480023 0.016942716795349765 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 107187 23496 SVINFLDQL True PC9_epitope_Rep1 1047.5600608155898 1047.5589699358602 95.164 2 0.0738081588913356 0.0035486929432480023 0.016943310309704893 ['ENSG00000196976|ENST00000357360|LAGE3'] 96365 18169 RYTVGGLETF True PC9_epitope_Rep5 1141.5767735088898 1141.57566993586 74.896 2 0.07380598280293146 0.0035486929432480023 0.01694411308274082 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 26309 10474 FHLSSQSSL True PC9_epitope_Rep6 1004.49270953176 1004.49160993586 51.047 2 0.07380590584158729 0.0035486929432480023 0.016944141474923836 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 8239 7774 ATGENLPRV True PC9_epitope_Rep6 955.5086939490699 955.50758993586 39.271 2 0.07379702703147407 0.0035486929432480023 0.016947417296658787 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 97955 10522 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.4652749679301 45.539 1 0.0737749598968215 0.0035486929432480023 0.01695556147746609 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 28748 13968 FSSPHLVQV True PC9_epitope_Rep4 1012.5341804209198 1012.53308993586 61.632 2 0.07376551717832779 0.0035486929432480023 0.01695904755418454 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 73016 19529 MRASSFLIV True PC9_epitope_Rep2 1022.5582869937799 1022.55718993586 80.502 2 0.07374884666189371 0.0035486929432480023 0.016965203625988565 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 65307 21602 LRDAVLLVF True PC9_epitope_Rep1 1044.6331661861998 1044.63206993586 87.915 2 0.07373966464178269 0.0035486929432480023 0.01696859524011513 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 96656 10546 SAIQSISHV True PC9_epitope_Rep1 940.4977949122 940.49668993586 45.455 2 0.07372533252207485 0.0035486929432480023 0.016973890434667363 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 122221 13323 VGAPKIPSV True PC9_epitope_Rep3 866.5225531080599 866.52144993586 56.28 2 0.07371860621717413 0.0035486929432480023 0.016976376087950464 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 140164 16238 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51807496793 67.277 1 0.07371789864359278 0.0035486929432480023 0.016976637585886 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 129323 15361 VQYGNVPAV True PC9_epitope_Rep1 945.4919812557698 945.49088993586 63.903 2 0.07371531142087806 0.0035486929432480023 0.01697759377752966 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462', 'ENST00000497489.5_1_9:109691986-109693263:+|nuORF'] 25595 15400 FELPQTPLA True H1975_Epitope_Rep2 1014.5385970950199 1014.53750993586 64.395 2 0.0737123487639474 0.0035486929432480023 0.01697868878446939 ['ENSG00000113369|ENST00000265138|ARRDC3'] 62126 4138 LLEGEESR True H1975_Epitope_Rep1 931.4610750503099 931.45996993586 20.844 2 0.07371219793783187 0.0035486929432480023 0.016978744532012244 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 17240 15630 EHAEALLL True PC9_epitope_Rep5 894.4810822188999 894.47998993586 65.131 2 0.07371019082568234 0.0035486929432480023 0.016979486406272143 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 111414 10792 THSLTTPVV True PC9_epitope_Rep3 953.51819600361 953.51708993586 46.475 2 0.07369873758872046 0.0035486929432480023 0.016983720359308216 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 77197 10270 NRSNTVVIM True PC9_epitope_Rep1 1032.53861417836 1032.53750993586 44.388 2 0.07369519504430624 0.0035486929432480023 0.016985030141142762 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 114621 18551 TQDSSILPL True PC9_epitope_Rep6 972.5127762699999 972.51166993586 83.995 2 0.07368880708505345 0.0035486929432480023 0.016987392192933132 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 54170 18791 KVTDDLVCL True PC9_epitope_Rep5 1004.5212327787199 1004.52012993586 77.293 2 0.07368052558505009 0.0035486929432480023 0.016990454866560905 ['ENSG00000143742|ENST00000304786|SRP9'] 72263 9981 MHSGPVVAM True PC9_epitope_Rep5 927.43064395251 927.42954993586 43.367 2 0.07367919926629551 0.0035486929432480023 0.016990945414915463 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 98234 8461 SEVATLTAA True H1975_Epitope_Rep3 861.4443623570099 861.44381496793 37.53 1 0.07367458250042025 0.0035486929432480023 0.016992653061003227 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 26045 15745 FGIDRDAIAQA True PC9_epitope_Rep1 1175.59348620219 1175.5923899358602 65.388 2 0.07367156114066292 0.0035486929432480023 0.016993770685738034 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 111489 18230 THYDHVLIEL True PC9_epitope_Rep1 1238.6295373577398 1238.62789490379 74.912 3 0.07366880042243189 0.0035486929432480023 0.016994791956840772 ['ENSG00000076003|ENST00000264156|MCM6'] 62989 15069 LLPNHSYVF True PC9_epitope_Rep6 1088.5654805492 1088.5643899358602 70.016 2 0.07366858135643684 0.0035486929432480023 0.016994872998256014 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 17670 18760 EHLQLISL True PC9_epitope_Rep4 951.5389314481899 951.53782993586 80.243 2 0.07366528453494159 0.0035486929432480023 0.016996092669889516 ['ENSG00000163918|ENST00000296273|RFC4'] 2680 9740 AESPSWTP True H1975_Epitope_Rep2 873.38684748089 873.3862949679301 42.451 1 0.07366340383252465 0.0035486929432480023 0.016996788479323975 ['ENSG00000085840|ENST00000371568|ORC1'] 35049 8782 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 39.134 2 0.07365001171700304 0.0035486929432480023 0.017001743968103653 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 78175 23168 NYASTFTWW True PC9_epitope_Rep5 1174.5083595959 1174.5072699358602 94.105 2 0.07364749267105893 0.0035486929432480023 0.01700267624147258 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 45202 12647 IPRPVDGVEV True PC9_epitope_Rep4 1079.59750895347 1079.59640993586 56.487 2 0.07364602795828495 0.0035486929432480023 0.01700321833866143 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 82445 5194 PPPPPIAR True NCI_RA007_Epitope_Rep2 843.49667271339 843.49556993586 24.823 2 0.0736456857289991 0.0035486929432480023 0.017003345001668092 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000525816.1_1_11:84732145-84732388:-|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 44303 16567 ILDEVIMGY True H1975_Epitope_Rep1 1051.5259838059899 1051.52488993586 69.1 2 0.073632258375146 0.0035486929432480023 0.017008315312283754 ['ENSG00000138160|ENST00000260731|KIF11'] 121523 18112 VFAGVFNTF True NCI_RA007_Epitope_Rep5 1000.50181766348 1000.50072993586 76.472 2 0.07362228484134621 0.0035486929432480023 0.01701200801995961 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 108203 16317 SYGSVFKAI True PC9_epitope_Rep2 970.5123823471799 970.51128993586 68.008 2 0.07361947934328576 0.0035486929432480023 0.017013046891759854 ['ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 17339 16066 EHASSLLEL True PC9_epitope_Rep4 997.5080252427299 997.50692993586 69.732 2 0.07360205027423469 0.0035486929432480023 0.01701950217104927 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 125186 15427 VIIDDHPEVTV True PC9_epitope_Rep4 1235.63976768827 1235.6386699358602 67.27 2 0.07359633944533213 0.0035486929432480023 0.017021617810265385 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 23950 19125 EYLLKVNEI True PC9_epitope_Rep5 1119.61757569171 1119.61646993586 78.599 2 0.07359113526648717 0.0035486929432480023 0.017023545968196337 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 110970 17885 THALPIPVI True PC9_epitope_Rep6 959.5804023373499 959.57930993586 81.42 2 0.07358150708904429 0.0035486929432480023 0.01702711376085247 ['ENSG00000136628|ENST00000366923|EPRS1'] 74594 21812 NGFPVFATV True PC9_epitope_Rep3 950.48616759934 950.48561496793 89.198 1 0.07358075578130319 0.0035486929432480023 0.01702739219273376 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 17819 17582 EHSTVITFL True PC9_epitope_Rep6 1045.54441075145 1045.5433099358602 80.268 2 0.07356943086831257 0.0035486929432480023 0.017031589676254334 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 135980 19987 WQLLLPTAL True NCI_RA007_Epitope_Rep3 1053.62226714933 1053.62116993586 87.106 2 0.07356880688370888 0.0035486929432480023 0.017031820978828282 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 121791 10934 VFPDKGYSF True NCI_RA007_Epitope_Rep5 1058.5072969667401 1058.5061899358602 48.697 2 0.07355157185965264 0.0035486929432480023 0.017038210920641582 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 17316 7763 EHALGTPEV True PC9_epitope_Rep6 951.4661604307499 951.46506993586 39.223 2 0.07355012604472806 0.0035486929432480023 0.017038747062522425 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 59579 8630 LFVGGIKED True NCI_RA007_Epitope_Rep4 976.5229470308799 976.52184993586 39.98 2 0.07354800172287376 0.0035486929432480023 0.017039534839024244 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 108925 11190 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53907496793 48.082 1 0.07353843313040405 0.0035486929432480023 0.01704308364375197 ['ENSG00000183751|ENST00000568546|TBL3'] 105761 12288 SSGGVIYL True H1975_Epitope_Rep2 794.41741933318 794.4168749679301 52.349 1 0.0735352668960466 0.0035486929432480023 0.017044258089646665 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 103655 17564 SPTYQYVTV True PC9_epitope_Rep1 1056.5127762700001 1056.51166993586 72.353 2 0.07352630949636965 0.0035486929432480023 0.017047581049838757 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 98142 11885 SESPITVEV True H1975_Epitope_Rep3 959.48114178855 959.4805949679301 50.866 1 0.07352522408333154 0.0035486929432480023 0.017047983750471 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 5526 11541 AMDPVSVSY True H1975_Epitope_Rep2 967.4320834211501 967.43098993586 49.452 2 0.0735234148093935 0.0035486929432480023 0.017048655031406675 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 104797 23239 SQYPEIIFL True PC9_epitope_Rep1 1108.580461907 1108.57936993586 94.179 2 0.07351785396304676 0.0035486929432480023 0.01705071838300369 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 77895 22264 NVIDYIDTI True PC9_epitope_Rep2 1064.53899101784 1064.5378899358602 91.118 2 0.07351541442375675 0.0035486929432480023 0.017051623647074594 ['ENSG00000156017|ENST00000376834|CARNMT1'] 45826 8363 ISDGKMQLY True H1975_Epitope_Rep2 1053.51648175145 1053.5153899358602 37.12 2 0.07351412131010421 0.0035486929432480023 0.01705210351370567 ['ZNF607|p.K428Rfs*97|1|0.38|ENSG00000198182|chr19:37698850-37698850|C/-|frameshift_variant', 'nc|ENSG00000198182|Q96SK3-3|ZNF607', 'ENSG00000198182|ENST00000355202|ZNF607'] 121637 8800 VFIDKQTNL True NCI_RA007_Epitope_Rep4 1076.5866099166 1076.58550993586 40.66 2 0.07351389229886629 0.0035486929432480023 0.0170521884996943 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 95739 15861 RYGSDFYSM True PC9_epitope_Rep1 1124.45969515132 1124.4585899358601 65.818 2 0.07351387925610857 0.0035486929432480023 0.017052193339868873 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 72876 8512 MPRQLSAAAA True PC9_epitope_Rep1 1014.5280494946599 1014.52694993586 37.578 2 0.07350841555124712 0.0035486929432480023 0.017054221036010963 ['ENSG00000078081|ENST00000265598|LAMP3'] 70351 18051 LVSPASFENV True PC9_epitope_Rep6 1061.5393253710101 1061.53822993586 82.064 2 0.07350764670187833 0.0035486929432480023 0.017054506390209605 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 121978 11556 VFTSRSAAF True PC9_epitope_Rep3 984.5028802926398 984.50178993586 49.464 2 0.07349821089072253 0.0035486929432480023 0.017058008800703236 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 108210 13216 SYHPALNAI True PC9_epitope_Rep1 984.5028802926399 984.50178993586 55.699 2 0.07349225711020556 0.0035486929432480023 0.017060219085241392 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant', 'BIRC6|p.K712Sfs*9|1|0.29|ENSG00000115760|chr2:32415422-32415422|C/-|frameshift_variant'] 6867 11179 AQIDGTLST True PC9_epitope_Rep3 904.4501760134401 904.44906993586 48.005 2 0.07348909815448915 0.0035486929432480023 0.01706139192561346 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 78004 19062 NVPEGLLATV True PC9_epitope_Rep6 1011.56006081559 1011.55896993586 85.966 2 0.0734860545387638 0.0035486929432480023 0.017062522014013558 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 39859 6827 HPADSVVSV True PC9_epitope_Rep6 909.4555957470501 909.45448993586 35.121 2 0.07348154377313365 0.0035486929432480023 0.01706419698011899 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 90355 4595 REFTDSAEA True NCI_RA007_Epitope_Rep4 1024.4461532621597 1024.4450499358602 24.084 2 0.07346570947132193 0.0035486929432480023 0.01707007788276939 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL'] 120457 6033 VEERITQVA True H1975_Epitope_Rep2 1043.56112344475 1043.56002993586 28.184 2 0.073459607822165 0.0035486929432480023 0.017072344554316828 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'CHD3|p.A1188S|1|0.15|ENSG00000170004|chr17:7903338-7903338|G/T|missense_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 134369 5792 VYPERSTSY True PC9_epitope_Rep4 1100.51383889916 1100.51274993586 29.133 2 0.07345650257301876 0.0035486929432480023 0.01707349821535487 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 134649 11072 VYSQIPAAVKL True NCI_RA007_Epitope_Rep3 1187.6914093383098 1187.6903099358601 50.653 2 0.07344952677836465 0.0035486929432480023 0.017076090124136245 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 87561 10233 QQLGKVVQV True PC9_epitope_Rep1 997.5920296502098 997.59092993586 44.242 2 0.0734462491212335 0.0035486929432480023 0.017077308088418522 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 8281 21643 ATIFDLSEV True PC9_epitope_Rep4 993.5018772331299 993.50132496793 91.441 1 0.07342975833646367 0.0035486929432480023 0.017083437222559693 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 11917 11371 DHLPNAAL True PC9_epitope_Rep5 849.43446637965 849.43336993586 48.735 2 0.07342719228575269 0.003570462537192318 0.017084391130974326 ['ENSG00000101577|ENST00000677752|LPIN2'] 35209 10940 GRAPGGLSL True PC9_epitope_Rep1 826.4661008611 826.4650099358599 46.969 2 0.07341703892772483 0.003570462537192318 0.01708816604419834 ['ENSG00000171223|ENST00000302754|JUNB'] 88018 13887 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 58.256 2 0.07341665320011188 0.003570462537192318 0.01708830946899978 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 65898 10373 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42760993586 44.91 2 0.07340277766045113 0.003570462537192318 0.017093469543876694 ['ENSG00000182108|ENST00000331808|DEXI'] 64780 17819 LQAPELANV True PC9_epitope_Rep4 953.5181960036099 953.51708993586 76.573 2 0.07339999282783964 0.003570462537192318 0.017094505349668217 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 30044 18704 FYGPQVNNI True PC9_epitope_Rep5 1050.51344497634 1050.5123499358601 76.962 2 0.07338859056797116 0.003570462537192318 0.017098746976306034 ['ENSG00000106299|ENST00000223023|WASL'] 44198 20929 IIYPGAFVDL True PC9_epitope_Rep6 1106.60119735158 1106.60010993586 93.276 2 0.07338666956726396 0.003570462537192318 0.017099461682421227 ['ENSG00000012174|ENST00000379484|MBTPS2'] 69105 18339 LTRGIITEI True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 83.183 2 0.07337339442565889 0.003570462537192318 0.017104401442157396 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000264874.7_1_6:7397003-7402949:+|nuORF'] 8113 8811 ATEDPWKTNY True H1975_Epitope_Rep2 1223.54586730343 1223.5447699358601 38.857 2 0.07337177383270307 0.003570462537192318 0.017105004565279722 ['ENSG00000139684|ENST00000378720|ESD'] 140304 6070 YRDEFSHQV True PC9_epitope_Rep4 1179.53088594563 1179.52924490379 30.348 3 0.07336781325173239 0.003570462537192318 0.017106478626160073 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.T1015Pfs*15|1|0.53|ENSG00000109111|chr17:28688125-28688125|G/-|frameshift_variant'] 103723 5724 SPVFTSRSAA True PC9_epitope_Rep4 1021.51925863277 1021.51816993586 28.843 2 0.07335745411312684 0.003570462537192318 0.017110334679284547 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 53177 5897 KQDGTIQNL True PC9_epitope_Rep6 1015.52982331647 1015.52872993586 30.948 2 0.0733547488372602 0.003570462537192318 0.01711134181559054 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 64854 13909 LQDPSAIKI True PC9_epitope_Rep2 983.5651461960299 983.56404993586 58.78 2 0.07334813762123375 0.003570462537192318 0.017113803310402072 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 17300 12991 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 61.547 2 0.07334265518891066 0.003570462537192318 0.01711584478473433 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 49129 5841 KEKLIAPVA True NCI_RA007_Epitope_Rep4 967.6066170851898 967.60552993586 29.092 2 0.07333291899515566 0.003570462537192318 0.0171194707749894 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 88849 20718 QVAVAGLLTV True PC9_epitope_Rep4 969.58588164061 969.58478993586 87.855 2 0.07332179076108522 0.003570462537192318 0.01712361606794103 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 110317 7984 TETDSLVSA True H1975_Epitope_Rep3 921.4291062156899 921.42855496793 35.68 1 0.07331896803751534 0.003570462537192318 0.017124667687218976 ['nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183881502-183882771:+|nuORF'] 105268 21725 SRLGLPLLL True PC9_epitope_Rep1 980.63825156664 980.63714993586 88.396 2 0.07331001409202233 0.003570462537192318 0.01712800391971812 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 4769 16648 ALDSTNVEL True PC9_epitope_Rep2 960.47639076128 960.47528993586 69.28 2 0.07327928578109812 0.003570462537192318 0.017139457853404202 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 5915 16631 APGNPVLAV True PC9_epitope_Rep5 836.4756029156399 836.4745099358599 68.977 2 0.07326634382300422 0.003570462537192318 0.017144284078284597 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 21869 12226 ESDFDDEAYY True H1975_Epitope_Rep2 1252.4407930982 1252.43968993586 52.111 2 0.073265614679699 0.003570462537192318 0.01714455602288061 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 88714 12084 QTHSVFVNV True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 51.791 2 0.07323908108371117 0.003570462537192318 0.017154454839027968 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 84882 5690 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 26.917 1 0.07323796696185782 0.003570462537192318 0.017154870597511373 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 21125 8003 ERANGMEL True PC9_epitope_Rep5 918.4229157197799 918.42180993586 35.722 2 0.07322005774567382 0.003570462537192318 0.017161555090259035 ['nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'nc|ENSG00000164548|Q13595-2|TRA2A', 'ENST00000494255.5_1_7:23547037-23556014:-|nuORF'] 102510 6864 SLVNLGGSK True NCI_RA007_Epitope_Rep5 873.4919812557699 873.49088993586 33.085 2 0.07320845340274128 0.003570462537192318 0.017165887623388325 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 40433 18939 HRALVAVLL True PC9_epitope_Rep5 990.6338348925399 990.63272993586 77.872 2 0.07319602481921726 0.003570462537192318 0.0171705290168856 ['ENSG00000089154|ENST00000300648|GCN1'] 118103 21350 TYGPSFPAF True PC9_epitope_Rep2 985.4545331178899 985.4539849679301 87.59 1 0.0731941787007494 0.003570462537192318 0.017171218540162972 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 31787 8222 GEIENQITA True H1975_Epitope_Rep3 973.4716397340098 973.4710949679301 36.609 1 0.07319165257762206 0.003570462537192318 0.017172162086118537 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 6335 7684 APRPTIINA True PC9_epitope_Rep6 951.5501648382299 951.54906993586 38.884 2 0.07318344603018857 0.003570462537192318 0.017175227690453314 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 1002 7914 AEAATAFGA True H1975_Epitope_Rep2 807.3762827971899 807.37573496793 35.389 1 0.0731811118214941 0.003570462537192318 0.017176099740744803 ['ENSG00000124535|ENST00000380773|WRNIP1', 'nc|ENSG00000124535|Q96S55-2|WRNIP1'] 45884 5486 ISDSEGFK True PC9_epitope_Rep3 881.4130622287299 881.41196993586 26.176 2 0.07316648391796032 0.003570462537192318 0.017181565598598555 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 43865 11014 IHSSIVSTL True PC9_epitope_Rep6 955.5338460677501 955.53274993586 53.263 2 0.07316221358395339 0.003570462537192318 0.017183161554819047 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 42976 7408 IESRTLAIA True H1975_Epitope_Rep3 972.5603951687599 972.55928993586 33.472 2 0.0731545829188114 0.003570462537192318 0.01718601371373327 ['ENSG00000147872|ENST00000276914|PLIN2'] 53421 13278 KQYPISLVL True NCI_RA007_Epitope_Rep3 1059.63283183303 1059.6317299358602 59.5 2 0.07313416026271734 0.003570462537192318 0.01719364937371991 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y', 'DDX3X|p.V422Kfs*13|1|0.5|ENSG00000215301|chrX:41345494-41345497|TGGG/-|frameshift_variant', 'ENST00000463199.1_1_Y:15025644-15026909:+|nuORF', 'nc|ENSG00000067048|O15523-3|DDX3Y'] 62647 13756 LLLEVISGER True NCI_RA007_Epitope_Rep2 1127.65502382959 1127.65392993586 58.154 2 0.07312226244529257 0.003570462537192318 0.017198099203461725 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'ACTN2|p.P167Lfs*5|1|0.05|ENSG00000077522|chr1:236725983-236725983|C/-|frameshift_variant', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 40390 4329 HQVEQTEL True NCI_RA007_Epitope_Rep3 982.4719740871799 982.47086993586 23.776 2 0.07311647523138429 0.003570462537192318 0.01720026403039329 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 114623 21229 TQDTNTFFL True PC9_epitope_Rep2 1085.50293986229 1085.5023749679299 87.117 1 0.07311588667903236 0.003570462537192318 0.01720048420473434 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 115129 10281 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 47.232 2 0.0731043253298364 0.003570462537192318 0.01720480977532774 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 39780 15767 HLYGGIILL True H1975_Epitope_Rep2 997.5960524014899 997.59494993586 65.826 2 0.0730974770827214 0.003570462537192318 0.01720737245919381 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant', 'ENSG00000139826|ENST00000375898|ABHD13'] 6893 10327 AQIEGGVHGL True PC9_epitope_Rep5 979.50869394907 979.50758993586 44.707 2 0.07308353325570252 0.003570462537192318 0.01721259147689914 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 32211 8525 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 37.747 1 0.07308318183206718 0.003570462537192318 0.017212723029800658 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 2662 6807 AESLVDQSA True H1975_Epitope_Rep2 918.4294405688601 918.42834993586 31.101 2 0.07307721606617015 0.003570462537192318 0.017214956413647856 ['SIKE1|p.A49Gfs*13|1|0.06|ENSG00000052723|chr1:114780462-114780462|G/-|frameshift_variant', 'ENST00000506320.1_1_1:115321857-115323228:-|nuORF', 'ENST00000474562.1_1_1:115321817-115323228:-|nuORF', 'ENST00000475335.5_1_1:115321747-115323228:-|nuORF', 'ENSG00000052723|ENST00000060969|SIKE1', 'nc|ENSG00000052723|Q9BRV8-2|SIKE1'] 6117 14952 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 62.335 2 0.07307556444954033 0.003570462537192318 0.01721557477140077 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 65899 10464 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42760993586 45.267 2 0.0730748146433404 0.003570462537192318 0.01721585550223731 ['ENSG00000182108|ENST00000331808|DEXI'] 61269 23374 LIPEYLNFI True PC9_epitope_Rep2 1120.61684741572 1120.61574993586 95.382 2 0.07306153556578611 0.003570462537192318 0.017220827953237223 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 111583 21781 TIDDGIFEV True PC9_epitope_Rep3 1007.48114178855 1007.48057496793 89.079 1 0.07306137131160463 0.003570462537192318 0.01722088946780553 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 32887 7412 GHSGPITSI True PC9_epitope_Rep4 867.4450310633501 867.44392993586 35.859 2 0.07305866547996691 0.003570462537192318 0.017221902853806103 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 21804 9615 ERYKEVAEL True PC9_epitope_Rep3 1135.5873381925899 1135.58569490379 41.934 3 0.07304122905814911 0.003570462537192318 0.01722843445726245 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 128943 20853 VQIGDIVTV True PC9_epitope_Rep2 942.5385970950199 942.53750993586 85.656 2 0.07302548484731056 0.003570462537192318 0.01723433414208684 ['ENSG00000142534|ENST00000270625|RPS11'] 32953 10091 GIDIFTGK True H1975_Epitope_Rep1 849.45961849833 849.45852993586 43.751 2 0.07302435933748924 0.003570462537192318 0.01723475596596443 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 24246 16722 EYSKYLQQAF True PC9_epitope_Rep4 1275.6135529404298 1275.61244993586 72.29 2 0.07301884184077603 0.003570462537192318 0.017236823978070134 ['nc|ENSG00000162702|Q9Y2X9-2|ZNF281', 'ENSG00000162702|ENST00000367353|ZNF281'] 2727 11691 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.47964993586 50.044 2 0.07301312135324386 0.003570462537192318 0.017238968316374764 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 24022 18557 EYMLQNHVF True PC9_epitope_Rep5 1179.5382798251899 1179.5371899358602 76.402 2 0.07300906710124125 0.003570462537192318 0.01724048821230129 ['ENSG00000205339|ENST00000379719|IPO7'] 9279 19593 AVQDFLHEI True PC9_epitope_Rep4 1070.53965972418 1070.53856993586 83.489 2 0.07300781667365912 0.003570462537192318 0.01724095700939503 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ATR|p.V1555Efs*36|1|0.04|ENSG00000175054|chr3:142512421-142512448|ATGGTATGCTGATCGTCATGCTTTAGAA/-|frameshift_variant'] 111622 15890 TIDPSNPMV True PC9_epitope_Rep1 972.45863252216 972.45752993586 65.931 2 0.07299897997426283 0.003570462537192318 0.017244270308685198 ['ENSG00000198730|ENST00000361367|CTR9'] 98055 9978 SEQPPNSVLP True H1975_Epitope_Rep3 1066.5294889633 1066.52838993586 43.416 2 0.07296545867527307 0.003583649933985396 0.017256844414557257 ['nc|ENSG00000241839|Q8TD55-2|PLEKHO2', 'ENSG00000241839|ENST00000323544|PLEKHO2'] 44369 20865 ILEPSLYTV True PC9_epitope_Rep2 1033.5695628701299 1033.56846993586 85.703 2 0.07296452773622134 0.003583649933985396 0.01725719373864305 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 42656 7115 IEHISVSP True H1975_Epitope_Rep3 880.46543215476 880.46432993586 32.338 2 0.0729605814921714 0.003583649933985396 0.017258674593862346 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF', 'ENST00000498365.1_1_2:190327217-190328592:+|nuORF'] 17496 7010 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.53465490379 31.931 3 0.07295846167050339 0.003583649933985396 0.01725947012022473 ['ENSG00000162378|ENST00000294353|ZYG11B'] 1996 10447 AEIQGVIDA True H1975_Epitope_Rep1 914.4709114580199 914.4703649679301 45.139 1 0.07294965285700493 0.003583649933985396 0.017262776255096108 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 107892 11094 SVVPDVRSV True PC9_epitope_Rep6 956.52909504048 956.52798993586 53.599 2 0.0729433872019862 0.003583649933985396 0.01726512824635086 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 97944 17291 SENMFSFEV True H1975_Epitope_Rep2 1088.44846176128 1088.44736993586 71.803 2 0.07293242342175359 0.003583649933985396 0.017269244527794395 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 26037 6192 FGHGAEDSL True NCI_RA007_Epitope_Rep5 931.40356017419 931.40246993586 30.496 2 0.0729293477298594 0.003583649933985396 0.01727039944034268 ['ENSG00000173432|ENST00000356524|SAA1'] 7066 20019 AQQVILVQV True PC9_epitope_Rep3 996.5967806774798 996.59568993586 82.25 2 0.07292915997018747 0.003583649933985396 0.017270469945825786 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF', 'nc|ENSG00000075420|Q53EP0-3|FNDC3B'] 27937 21911 FQEGDIILV True PC9_epitope_Rep1 1032.5491617787197 1032.5480699358602 89.096 2 0.07292490065714025 0.003583649933985396 0.017272069428817236 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 92765 13779 RPADVIFAT True PC9_epitope_Rep2 988.5341804209199 988.53308993586 58.285 2 0.07292469997669875 0.003583649933985396 0.0172721447929421 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 36066 17678 GVAANDVIVHI True PC9_epitope_Rep3 1106.6084079903399 1106.60730993586 73.193 2 0.0729239124899151 0.003583649933985396 0.017272440531000445 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 77199 9362 NRSNTVVIM True PC9_epitope_Rep2 1032.53861417836 1032.53750993586 41.346 2 0.07291694714064093 0.003583649933985396 0.017275056549560703 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 32886 8966 GHSGPITSI True PC9_epitope_Rep3 867.4450310633501 867.44392993586 39.435 2 0.0729145883487796 0.003583649933985396 0.0172759425387178 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 115118 10713 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 46.524 2 0.0729144295358196 0.003583649933985396 0.017276002192194512 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 141173 14966 YSVDIPLDK True PC9_epitope_Rep4 1048.54407639828 1048.5429699358601 65.505 2 0.07291312552229592 0.003583649933985396 0.0172764920142386 ['ENSG00000131469|ENST00000253788|RPL27'] 11972 10174 DHNSLDSSL True PC9_epitope_Rep5 986.4305031980201 986.42940993586 44.121 2 0.07290998619710687 0.003583649933985396 0.01727767128086763 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 76420 22035 NQDNLQLFL True PC9_epitope_Rep2 1103.5611234447501 1103.56002993586 90.23 2 0.07290796171326624 0.003583649933985396 0.017278431804387435 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 133065 19811 VVPQQLLTV True PC9_epitope_Rep4 995.60153170475 995.60042993586 84.329 2 0.07290620433974643 0.003583649933985396 0.017279092009658097 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 96421 18272 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41211496793 75.073 1 0.07289443934448732 0.003583649933985396 0.017283512454010132 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 118500 10940 TYQDIQNTI True NCI_RA007_Epitope_Rep2 1094.52440358286 1094.52387496793 47.162 1 0.07289184963574596 0.003583649933985396 0.017284485622415587 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 31819 10113 GEIPKVLVA True H1975_Epitope_Rep3 924.5644179200399 924.56332993586 43.941 2 0.07288969480102916 0.003583649933985396 0.0172852954113429 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 40235 10762 HQIEAVDGEEL True PC9_epitope_Rep6 1238.5778957076998 1238.57678993586 52.224 2 0.0728889814750268 0.003583649933985396 0.01728556348768853 ['ENSG00000105404|ENST00000222008|RABAC1', 'ENST00000595226.1_1_19:42461000-42461518:-|nuORF'] 97456 11525 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 49.316 1 0.07288776815660675 0.003583649933985396 0.01728601947596111 ['ENSG00000135900|ENST00000258383|MRPL44'] 142117 21948 YVPPELITL True PC9_epitope_Rep2 1043.59029831471 1043.58920993586 89.898 2 0.0728828337844104 0.003583649933985396 0.017287874022465954 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 31798 17543 GEIFNVQLP True H1975_Epitope_Rep2 1015.5338460677499 1015.53274993586 72.785 2 0.0728747672691452 0.003583649933985396 0.017290906159018998 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 6519 6540 APTGDLPRA True PC9_epitope_Rep2 896.4715801643599 896.47048993586 30.57 2 0.0728612280437282 0.003583649933985396 0.01729599655179373 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 118575 17179 TYQVLAVTF True NCI_RA007_Epitope_Rep5 1040.5542471591598 1040.5531499358601 72.852 2 0.07285964748819215 0.003583649933985396 0.017296590889779858 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 47971 12707 IYKAPSENW True PC9_epitope_Rep3 1106.53965972418 1106.53856993586 53.901 2 0.07285185171271853 0.003583649933985396 0.017299522620899475 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 86042 10771 QHQSGIVQL True PC9_epitope_Rep3 1008.5352430500798 1008.53414993586 46.387 2 0.07283771597369616 0.003583649933985396 0.01730483977727745 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 140428 7966 YRGGSISV True PC9_epitope_Rep5 837.43446637965 837.43336993586 35.582 2 0.07283071656399673 0.003583649933985396 0.017307473165782683 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 8008 17032 ATDLAYYLV True H1975_Epitope_Rep2 1027.52261267771 1027.52207496793 70.77 1 0.07282200456936282 0.003583649933985396 0.017310751399856442 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 6787 21328 AQEDYLFSV True PC9_epitope_Rep2 1070.49204082542 1070.49094993586 87.502 2 0.07281787018879181 0.003583649933985396 0.0173123073264264 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 93011 10900 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 46.914 2 0.07281694299474899 0.003583649933985396 0.017312656283057355 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 118326 14657 TYMGHTGAVW True PC9_epitope_Rep3 1121.4964150132098 1121.4953099358602 61.514 2 0.07281421773134579 0.003583649933985396 0.017313681994757985 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 1140 6316 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 29.291 2 0.07281091802336719 0.003583649933985396 0.01731492398656147 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 25359 8610 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.47562993586 38.075 2 0.07280849847451673 0.003583649933985396 0.0173158347438919 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 103943 17805 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51234993586 73.684 2 0.07280810203196221 0.003583649933985396 0.01731598397552236 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 114895 15536 TQSELATAL True PC9_epitope_Rep1 932.4814761417199 932.48092496793 64.584 1 0.07280477195236756 0.003583649933985396 0.01731723755409168 ['ENSG00000138629|ENST00000395081|UBL7'] 133491 21790 VWFPDMMPTW True NCI_RA007_Epitope_Rep5 1308.5671374253197 1308.5660299358601 90.942 2 0.07280450021139748 0.003583649933985396 0.017317339852257443 ['ENSG00000005812|ENST00000355619|FBXL3'] 39129 11798 HHYEGAVVIL True PC9_epitope_Rep6 1136.5978433066398 1136.5961849037901 56.57 3 0.07278828028687746 0.003583649933985396 0.017323446935059612 ['ENSG00000163655|ENST00000496455|GMPS'] 103091 20123 SPGTALILLEA True PC9_epitope_Rep6 1083.61757569171 1083.61646993586 90.077 2 0.072779619890018 0.003583649933985396 0.01732670854313308 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 75163 6046 NHYQKQLEI True PC9_epitope_Rep6 1171.5985715826298 1171.59691490379 31.62 3 0.07277498499287223 0.003583649933985396 0.017328454334436305 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 134725 12921 VYTSGIYNI True NCI_RA007_Epitope_Rep4 1028.51786165044 1028.51727496793 56.791 1 0.07274353928644722 0.003583649933985396 0.01734030306015427 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 53307 15663 KQLEAIDQLHL True PC9_epitope_Rep4 1306.7245003717399 1306.72285490379 68.175 3 0.07272624459296115 0.003583649933985396 0.017346822896008456 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 110098 5057 TEMEHEVAC True H1975_Epitope_Rep2 1047.40013166987 1047.3990299358602 24.534 2 0.07272553083542278 0.003583649933985396 0.017347092020597994 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 139127 19297 YLDPSVLSGV True PC9_epitope_Rep6 1048.54407639828 1048.5429699358601 86.873 2 0.07272040356064988 0.003583649933985396 0.017349025390037354 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 90052 4454 RDYVAPTA True NCI_RA007_Epitope_Rep3 891.4450310633499 891.44392993586 24.33 2 0.0727176630684569 0.003583649933985396 0.01735005884436538 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 104624 15934 SQSSLIHLV True PC9_epitope_Rep2 982.5447451046201 982.54364993586 66.538 2 0.07270970294550148 0.003583649933985396 0.017353060973472487 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 8405 15729 ATLSKIIQV True PC9_epitope_Rep2 971.6015317047498 971.60042993586 65.772 2 0.07270398139175112 0.003583649933985396 0.017355219132767167 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 138288 8905 YHDDDNSVL True PC9_epitope_Rep3 1076.44106788172 1076.43996993586 39.204 2 0.07270221056241988 0.003583649933985396 0.017355887136728067 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 24835 13946 FAVPENSSV True PC9_epitope_Rep4 948.4552613938799 948.45416993586 61.547 2 0.07269446562943854 0.003583649933985396 0.0173588090120012 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 40610 12018 HRIQDLEQL True PC9_epitope_Rep2 1150.6094706195 1150.60836993586 51.544 2 0.07268922297412635 0.003583649933985396 0.017360787130012274 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 114262 10311 TPNRATFVV True PC9_epitope_Rep4 1003.5450794577899 1003.5439899358599 47.348 2 0.07268673233802292 0.003583649933985396 0.017361726950787353 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 55351 8212 LAELEQER True PC9_epitope_Rep1 986.50327421546 986.50216993586 36.42 2 0.07268551073560407 0.003583649933985396 0.017362187929535623 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 26004 20908 FGFTLLEAL True NCI_RA007_Epitope_Rep3 1009.5484335027298 1009.54732993586 91.031 2 0.07267794071615039 0.003583649933985396 0.017365044773500118 ['ENSG00000155957|ENST00000358230|TMBIM4'] 35970 21142 GTVEQIVYL True PC9_epitope_Rep1 1020.5491617787197 1020.5485749679301 86.154 1 0.07267081566645978 0.003583649933985396 0.017367734089161688 ['ENSG00000182481|ENST00000330459|KPNA2'] 99221 13590 SHLSDQLTL True PC9_epitope_Rep4 1012.5189242796001 1012.51782993586 60.167 2 0.07266592025201953 0.003583649933985396 0.01736958206373645 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 71143 23807 LYLPSFFTY True PC9_epitope_Rep5 1149.57464825057 1149.5740749679298 96.555 1 0.07266468038642775 0.003583649933985396 0.01737005013071569 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 17370 14944 EHDGSLFQAV True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 65.422 2 0.07264862895260077 0.003583649933985396 0.017376110833065162 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 109941 7340 TEGGTVLTA True H1975_Epitope_Rep3 847.4287122928699 847.42816496793 33.21 1 0.07264742726347488 0.003583649933985396 0.017376564645935632 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 134553 14158 VYSDYLQTI True NCI_RA007_Epitope_Rep3 1100.53899101784 1100.5378899358602 62.978 2 0.07263906593571556 0.003583649933985396 0.01737972257088115 ['ENSG00000179715|ENST00000546455|PCED1B'] 39751 16356 HLVPEVPTV True PC9_epitope_Rep2 989.55458151233 989.55348993586 68.159 2 0.07263455512197314 0.003583649933985396 0.01738142644622774 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 11 5045 AAAAAAAAAAA True PC9_epitope_Rep6 799.41881631551 799.41770993586 27.036 2 0.07262983697413414 0.003583649933985396 0.017383208803995968 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 77201 8881 NRSNTVVIM True PC9_epitope_Rep4 1032.53861417836 1032.53750993586 41.693 2 0.07262897251971799 0.003583649933985396 0.01738353538421925 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 48812 2625 KDREDYVP True NCI_RA007_Epitope_Rep3 1020.4876241513199 1020.48652993586 14.786 2 0.07261112336332756 0.003583649933985396 0.017390279847995446 ['ENSG00000138594|ENST00000308580|TMOD3'] 64425 19282 LPNLQTVTV True PC9_epitope_Rep4 983.56514619603 983.56404993586 82.273 2 0.0726109094522412 0.003583649933985396 0.01739036069093892 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 141635 15071 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.49117496793 63.366 1 0.07260626530125926 0.003583649933985396 0.017392115930612982 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 3255 4741 AGFAGDDAPR True H1975_Epitope_Rep3 975.4410083120698 975.43990993586 23.361 2 0.07260136290631934 0.003583649933985396 0.01739396895098166 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 35268 19804 GRDLTDYLM True PC9_epitope_Rep3 1082.50664534374 1082.50554993586 81.408 2 0.07259592125264905 0.003583649933985396 0.01739602601633008 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 107216 13827 SVIQNLRTV True PC9_epitope_Rep5 1028.5978433066398 1028.59674993586 58.206 2 0.07258095819305783 0.003583649933985396 0.017401683547295984 ['ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1', 'PSMD1|p.V724Gfs*18|1|0.09|ENSG00000173692|chr2:231153616-231153620|ATGTC/-|frameshift_variant'] 33396 12850 GLADASLLKKV True PC9_epitope_Rep6 1113.6757592741699 1113.67466993586 60.94 2 0.07257985602638839 0.003583649933985396 0.01740210034387548 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 72271 8399 MHYNRKIIL True PC9_epitope_Rep2 1186.6644833978198 1186.66282490379 37.679 3 0.07257929613936046 0.003583649933985396 0.017402312074927446 ['ENST00000557431.5_1_14:78177213-78182211:+|nuORF'] 47989 17823 IYKIDFVRF True PC9_epitope_Rep6 1199.6702799709099 1199.66863490379 81.188 3 0.07257671219674361 0.003583649933985396 0.017403289268899707 ['nc|ENSG00000109103|Q13432-2|UNC119', 'ENSG00000109103|ENST00000335765|UNC119'] 140283 14512 YRAPEVLL True PC9_epitope_Rep6 959.5440168286299 959.54290993586 67.704 2 0.072570076860849 0.003583649933985396 0.017405798849752498 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 42973 7399 IESRTLAIA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 33.402 2 0.07256420779321594 0.003583649933985396 0.017408018896608687 ['ENSG00000147872|ENST00000276914|PLIN2'] 108476 21461 SYMEVPTYL True PC9_epitope_Rep3 1101.50524836141 1101.5041499358601 87.841 2 0.07255527979072685 0.003583649933985396 0.017411396526917592 ['ENSG00000162511|ENST00000294507|LAPTM5'] 1945 4665 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 23.04 2 0.07255248334684732 0.003583649933985396 0.017412454598982375 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 2287 11823 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 50.553 2 0.07253410296926013 0.003583649933985396 0.017419410546267458 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 84409 15430 QADLINELY True H1975_Epitope_Rep1 1077.53423999057 1077.5331499358601 64.622 2 0.07253058030915566 0.003583649933985396 0.017420743970917616 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 17273 15332 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 64.255 2 0.07252911574536301 0.003583649933985396 0.017421298376844346 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 62947 7390 LLPGELAK True H1975_Epitope_Rep3 839.5116540711899 839.51054993586 33.404 2 0.07252903142518531 0.003583649933985396 0.017421330296475534 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 85789 2624 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 14.743 2 0.0725287514865884 0.003583649933985396 0.017421436268377204 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 107193 23427 SVINFLDQL True PC9_epitope_Rep5 1047.5600608155898 1047.5589699358602 95.093 2 0.07252790353433076 0.003583649933985396 0.017421757267824543 ['ENSG00000196976|ENST00000357360|LAGE3'] 111811 23533 TILPAIILV True PC9_epitope_Rep2 951.63685458431 951.6363049679301 95.994 1 0.07251740115126207 0.003583649933985396 0.017425733488024356 ['ENSG00000198712|ENST00000361739|MT-CO2'] 106704 4129 STTTGHLIYK True NCI_RA007_Epitope_Rep5 1119.5924235730301 1119.5913299358601 22.377 2 0.07251710406329485 0.003583649933985396 0.01742584597828146 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2'] 38830 6005 HHDDPEVL True PC9_epitope_Rep1 960.4301092752 960.42900993586 27.912 2 0.07251567375298902 0.003583649933985396 0.017426387564590192 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 84168 17976 PYISNIYLI True NCI_RA007_Epitope_Rep4 1094.60119735158 1094.60010993586 77.78 2 0.07250766605470402 0.003583649933985396 0.017429419964155507 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 44300 4621 ILDERHDNY True H1975_Epitope_Rep3 1173.54145062933 1173.5398049037901 22.897 3 0.07248610348747662 0.003583649933985396 0.017437587830708805 ['nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENSG00000023287|ENST00000025008|RB1CC1', 'ENST00000522957.1_1_8:53536344-53555381:-|nuORF'] 85030 12735 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.5380449679301 54.045 1 0.072481460546738 0.003583649933985396 0.017439347033930453 ['ENSG00000139233|ENST00000266604|LLPH'] 39048 8732 HHSGNTYFL True PC9_epitope_Rep4 1074.48829285766 1074.4871899358602 41.093 2 0.07246505426055475 0.003583649933985396 0.01744556466986974 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 21792 17239 ERYFISHVL True PC9_epitope_Rep5 1162.61349337078 1162.6118549037901 71.327 3 0.07246236166144003 0.003583649933985396 0.017446585304494885 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF', 'RRM2|p.A219Vfs*8|1|0.18|ENSG00000171848|chr2:10126961-10126961|C/-|frameshift_variant'] 107307 10252 SVLDSTAKV True PC9_epitope_Rep3 918.5022115863 918.50110993586 44.385 2 0.07245755356745745 0.003583649933985396 0.01744840795909752 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 44477 20628 ILLDLTDNRL True PC9_epitope_Rep3 1184.6764875501601 1184.67538993586 84.616 2 0.07244908296553815 0.003583649933985396 0.017451619428724415 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant'] 10036 12570 AYSAKIALF True NCI_RA007_Epitope_Rep4 982.5487678558999 982.54766993586 55.368 2 0.07244771890005715 0.003583649933985396 0.017452136639790592 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 7665 8067 ASITALEAK True PC9_epitope_Rep2 902.50729696674 902.50618993586 36.39 2 0.0724407501227531 0.003583649933985396 0.01745477920459265 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 104635 17126 SQSSVVYEI True PC9_epitope_Rep2 1010.4920408254198 1010.49094993586 71.123 2 0.07244062173564605 0.003583649933985396 0.01745482789254769 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 117284 8597 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep6 1134.59546072858 1134.5943699358602 42.876 2 0.07243955956598623 0.003583649933985396 0.017455230701601317 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 27995 19610 FQLEHIM[Oxidation]DL True PC9_epitope_Rep5 1160.5535959166 1160.5524899358602 80.482 2 0.07243828718053388 0.003583649933985396 0.01745571324262778 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 54892 21577 KYPLNLYLL True PC9_epitope_Rep1 1135.66413196131 1135.66302993586 87.818 2 0.07243048456832663 0.003583649933985396 0.017458672585520228 ['ENSG00000155957|ENST00000358230|TMBIM4'] 99226 12525 SHLVATVTV True PC9_epitope_Rep3 925.52328138405 925.52218993586 53.202 2 0.07241601077584997 0.003583649933985396 0.017464163378872608 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 42936 8637 IESDPVTPP True H1975_Epitope_Rep2 953.47057710485 953.46948993586 38.18 2 0.07241311367591614 0.003583649933985396 0.01746526261818749 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant'] 142584 18317 YYLSKIEEL True PC9_epitope_Rep4 1156.6015912743999 1156.6004899358602 78.524 2 0.07240051373389453 0.003583649933985396 0.017470044128999752 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 100163 13156 SITSELHAV True PC9_epitope_Rep2 955.4974605590301 955.49636993586 55.875 2 0.07239966298350306 0.003583649933985396 0.017470367021244004 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 100982 20770 SLFRVITEV True PC9_epitope_Rep1 1062.60734536118 1062.6062499358602 84.719 2 0.07239679473005282 0.003583649933985396 0.0174714556736962 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 103495 7101 SPQQPGLSA True PC9_epitope_Rep4 883.4399456829099 883.43884993586 34.58 2 0.07239405338474694 0.003583649933985396 0.017472496216671914 ['ENSG00000170498|ENST00000367194|KISS1'] 66086 2733 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 14.577 3 0.07238452016590008 0.003583649933985396 0.01747611522476641 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 11778 9498 DHDITSQL True PC9_epitope_Rep6 927.42977492203 927.42866993586 46.789 2 0.0723758254461542 0.003583649933985396 0.01747941652743059 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 35031 18619 GQVEDVVGNL True PC9_epitope_Rep4 1028.5138388991597 1028.51274993586 79.695 2 0.0723692009903658 0.003583649933985396 0.017481932158749217 ['ENSG00000196878|ENST00000356082|LAMB3'] 44511 23536 ILLPQFLGV True PC9_epitope_Rep3 998.6164534928998 998.61534993586 95.812 2 0.07235660537587389 0.003583649933985396 0.0174867162587346 ['ENSG00000099282|ENST00000373290|TSPAN15'] 21855 8017 ESDAPGPVY True H1975_Epitope_Rep3 933.40797684829 933.4074249679301 35.81 1 0.07234895775775349 0.003583649933985396 0.017489621589982404 ['ENSG00000142207|ENST00000382751|URB1'] 56123 8797 LAVDKSASL True PC9_epitope_Rep2 902.50729696674 902.50618993586 39.191 2 0.07234864480365923 0.003583649933985396 0.017489740490824295 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 132689 4515 VVGVGMTK True NCI_RA007_Epitope_Rep3 789.44186025921 789.44076993586 24.616 2 0.07234581147466246 0.003583649933985396 0.017490816993378445 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 87218 14850 QPITPGPSI True PC9_epitope_Rep5 908.4967322830399 908.49618496793 62.121 1 0.0723437262856268 0.003583649933985396 0.017491609284904945 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 104180 20929 SQFPGAITL True PC9_epitope_Rep3 932.4967322830399 932.49618496793 85.781 1 0.07234212590638407 0.003583649933985396 0.017492217389960478 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 97470 11626 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 49.853 1 0.07233957459784549 0.003583649933985396 0.01749318686549011 ['ENSG00000135900|ENST00000258383|MRPL44'] 115609 16013 TRVDLVTMV True PC9_epitope_Rep6 1032.5637662970398 1032.5626699358602 73.915 2 0.07232558455987058 0.003583649933985396 0.017498503846827954 ['ENSG00000172890|ENST00000319023|NADSYN1'] 31073 16692 GATSLVTLL True H1975_Epitope_Rep3 873.51713337445 873.51658496793 69.727 1 0.07232396737449505 0.003583649933985396 0.017499118562563632 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 103383 6914 SPPIPLAK True H1975_Epitope_Rep3 821.50108938749 821.49998993586 31.555 2 0.07232336358701237 0.003583649933985396 0.017499348076122558 ['ENSG00000155660|ENST00000652332|PDIA4'] 47683 18958 IYADLNQNDF True PC9_epitope_Rep4 1211.5458673034302 1211.5447699358601 81.009 2 0.07231764021377808 0.003583649933985396 0.01750152380107318 ['ENSG00000064763|ENST00000536681|FAR2', 'FAR2|p.A81D|1|0.21|ENSG00000064763|chr12:29293352-29293352|C/A|missense_variant'] 108678 13359 SYQKVMALW True NCI_RA007_Epitope_Rep4 1124.5688516774799 1124.56774993586 58.54 2 0.07230742416102211 0.003583649933985396 0.017505408029712635 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 141877 19842 YVDPVITSI True PC9_epitope_Rep4 1005.53826274185 1005.53767496793 84.453 1 0.07230306768810651 0.003583649933985396 0.017507064640290372 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 49411 7497 KEVEQFTQVA True NCI_RA007_Epitope_Rep4 1177.5979028762902 1177.5968099358602 35.482 2 0.07230275053226053 0.003583649933985396 0.017507185248974377 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 43699 19730 IHDPSVFLL True PC9_epitope_Rep4 1039.57023157647 1039.56912993586 84.014 2 0.07230252922090057 0.003583649933985396 0.01750726941017464 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-9|USP54', 'nc|ENSG00000166348|Q70EL1-10|USP54', 'nc|ENSG00000166348|Q70EL1-8|USP54'] 137910 4774 YEYEGGHIKTA True H1975_Epitope_Rep3 1266.5880664685797 1266.58642490379 23.49 3 0.07230241599704172 0.003583649933985396 0.01750731246755757 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 75426 13582 NIVPVIAKA True PC9_epitope_Rep1 923.5804023373499 923.57930993586 57.099 2 0.0722998484636532 0.003583649933985396 0.017508288889442464 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 69465 20473 LVAEDIPLLFS True H1975_Epitope_Rep1 1215.6750905678298 1215.6739899358602 85.149 2 0.07229605569669494 0.003583649933985396 0.017509731354789285 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 49620 3046 KGELTGEVR True NCI_RA007_Epitope_Rep2 987.5349086969098 987.53380993586 16.439 2 0.07229512992448947 0.003583649933985396 0.0175100834612629 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 29786 18359 FVPIKVEQI True PC9_epitope_Rep1 1071.63283183303 1071.6317299358602 75.409 2 0.07229063124917989 0.003583649933985396 0.01751179457253291 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 32172 6301 GEVPESPEA True H1975_Epitope_Rep2 913.4028914678499 913.40234496793 29.173 1 0.07228916567619084 0.003583649933985396 0.0175123520497792 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 46942 17974 ITPDEFHFV True PC9_epitope_Rep6 1103.5287606873098 1103.52766993586 81.764 2 0.07226871858110763 0.003583649933985396 0.01752013146892976 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 89768 18066 RAIDFSPYL True PC9_epitope_Rep6 1080.56039516876 1080.55928993586 82.122 2 0.07226063044554286 0.003583649933985396 0.017523209611984607 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 140232 18451 YQYLLVTAL True NCI_RA007_Epitope_Rep5 1082.60119735158 1082.60010993586 77.797 2 0.0722594162131994 0.003583649933985396 0.017523671761886895 ['ENSG00000165389|ENST00000298130|SPTSSA'] 140912 5937 YSEGREFRY True H1975_Epitope_Rep3 1205.5465360097699 1205.54488490379 27.845 3 0.07225483444362904 0.003583649933985396 0.01752541573451908 ['nc|ENSG00000103126|O15169-2|AXIN1', 'ENSG00000103126|ENST00000262320|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 8416 10841 ATLTNILEH True NCI_RA007_Epitope_Rep4 1010.53965972418 1010.53856993586 48.55 2 0.07225346021946456 0.003583649933985396 0.017525938840945412 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'NLRC5|p.L1674Rfs*17|1|0.22|ENSG00000140853|chr16:57077960-57077960|T/-|frameshift_variant', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'nc|ENSG00000140853|Q86WI3-3|NLRC5', 'NLRC5|p.Q955Rfs*20|1|0.43|ENSG00000140853|chr16:57039835-57039835|G/-|frameshift_variant'] 29341 21086 FVDFNDPNF True PC9_epitope_Rep2 1113.47672511445 1113.47562993586 86.564 2 0.07224917202915804 0.003583649933985396 0.01752757125863987 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 97949 10671 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.4652749679301 46.072 1 0.07224449257802963 0.003583649933985396 0.01752935278143782 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 138388 17448 YHGLTVPL True PC9_epitope_Rep3 898.4912529797799 898.49014993586 72.288 2 0.07223053042703223 0.003583649933985396 0.017534669336779683 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 105496 16540 SRYPDQWIV True PC9_epitope_Rep6 1162.57710786206 1162.5760099358602 76.06 2 0.07222233814129964 0.003583649933985396 0.0175377895193055 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 104641 12856 SQSTVKVLI True PC9_epitope_Rep3 973.5807962601699 973.57968993586 54.469 2 0.07221807876354372 0.003583649933985396 0.017539411985019942 ['ENSG00000143621|ENST00000361891|ILF2'] 114319 22761 TPQSIFIFA True PC9_epitope_Rep3 1022.5436824754598 1022.5431749679301 92.819 1 0.07221185568465187 0.003583649933985396 0.017541782706440526 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 456 14612 AALQELLSK True PC9_epitope_Rep4 971.5651461960299 971.56404993586 64.136 2 0.07220372048088369 0.003583649933985396 0.01754488231213911 ['ENSG00000118181|ENST00000527673|RPS25'] 4833 9190 ALEISALK True H1975_Epitope_Rep3 843.5065686907499 843.50546993586 40.341 2 0.07220285119912717 0.003583649933985396 0.01754521354846722 ['ENST00000490918.5_1_6:3138827-3138989:+|nuORF'] 104281 15828 SQIHDIVLV True PC9_epitope_Rep4 1022.5760452328999 1022.5754749679301 68.805 1 0.07219746756917869 0.003600601891659501 0.01754726508825535 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 61993 20675 LLDPNVKSIFV True PC9_epitope_Rep5 1243.71762408615 1243.71652993586 84.581 2 0.0721942822997157 0.003600601891659501 0.01754847900358982 ['ENSG00000117419|ENST00000372257|ERI3', 'nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3'] 95407 19826 RWFDKSFTF True PC9_epitope_Rep2 1232.59784330664 1232.5961849037901 81.65 3 0.07218728342874539 0.003600601891659501 0.0175511465669656 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 77894 22556 NVIDYIDTI True PC9_epitope_Rep1 1064.53899101784 1064.5378899358602 91.566 2 0.0721693538329167 0.003600601891659501 0.01755798200389014 ['ENSG00000156017|ENST00000376834|CARNMT1'] 37892 17048 GYSEHFVEF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 73.57 2 0.07216309598081322 0.003600601891659501 0.017560368313820632 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 96832 15802 SASDWYDAL True NCI_RA007_Epitope_Rep4 1026.4294405688597 1026.42887496793 68.628 1 0.07215721493055328 0.003600601891659501 0.01756261121184396 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 87357 4751 QPSQPVTSA True PC9_epitope_Rep2 913.4505103666099 913.44940993586 23.647 2 0.07215447796429289 0.003600601891659501 0.017563655118741115 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 112187 19402 TKFGGIVVL True PC9_epitope_Rep2 932.5695033004798 932.56840993586 80.008 2 0.07213111730398317 0.003600601891659501 0.017572567454957302 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 106816 14496 SVALVIHNV True PC9_epitope_Rep5 950.5549158655001 950.55380993586 60.759 2 0.07211993497060395 0.003600601891659501 0.017576835116064143 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2'] 108829 18297 SYVQVTSNF True PC9_epitope_Rep1 1043.49237517859 1043.4912699358601 75.168 2 0.07211920201935187 0.003600601891659501 0.017577114875458492 ['ENSG00000072364|ENST00000265343|AFF4'] 7981 20048 ATDFGEALV True PC9_epitope_Rep1 921.4443623570098 921.44381496793 81.94 1 0.07211396985752304 0.003600601891659501 0.017579112053757368 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 7831 8294 ASVPKVETV True PC9_epitope_Rep2 928.52294703088 928.52184993586 37.265 2 0.072107647188999 0.003600601891659501 0.017581525772186836 ['ENSG00000100664|ENST00000216554|EIF5'] 2299 12007 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.51128993586 51.346 2 0.07210576255178289 0.003600601891659501 0.017582245303734603 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 7567 13045 ASETGFLTY True H1975_Epitope_Rep1 987.4549270407099 987.4543749679301 55.263 1 0.07210033072912908 0.003600601891659501 0.01758431926026333 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 35214 11285 GRAPGGLSL True PC9_epitope_Rep3 826.4661008611 826.4650099358599 48.415 2 0.07206762985474723 0.003600601891659501 0.017596809769934007 ['ENSG00000171223|ENST00000302754|JUNB'] 128310 7917 VPPPPPIAR True PC9_epitope_Rep2 942.56508662638 942.56398993586 35.819 2 0.07206178340672943 0.003600601891659501 0.017599043760861875 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 35976 21075 GTVEQIVYL True PC9_epitope_Rep5 1020.5491617787197 1020.5485749679301 86.125 1 0.07206111630956874 0.003600601891659501 0.017599298682605315 ['ENSG00000182481|ENST00000330459|KPNA2'] 90902 10087 REYAYDVPTSV True H1975_Epitope_Rep2 1298.6142812164198 1298.6131899358602 43.792 2 0.07204079459476952 0.003600601891659501 0.01760706597936394 ['nc|ENSG00000152990|Q8IWK6-3|ADGRA3', 'ENSG00000152990|ENST00000334304|ADGRA3'] 98303 5411 SEVQSTVEA True H1975_Epitope_Rep1 948.4400052525599 948.43890993586 25.87 2 0.07204005309837293 0.003600601891659501 0.01760734945168946 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 85373 5559 QEVAQVASA True H1975_Epitope_Rep3 901.4505103666098 901.44940993586 26.429 2 0.07203570363644042 0.003600601891659501 0.01760901232594918 ['ENSG00000196878|ENST00000356082|LAMB3'] 9482 21542 AVVPGLLEV True PC9_epitope_Rep2 895.5378688190299 895.53676993586 88.328 2 0.07203481171433436 0.003600601891659501 0.01760935334113304 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 24417 15175 FADEGSIFY True H1975_Epitope_Rep3 1047.45492704071 1047.4543749679299 63.774 1 0.07203447746743678 0.003600601891659501 0.01760948113780187 ['nc|ENSG00000107745|Q9BPX6-2|MICU1', 'ENSG00000107745|ENST00000361114|MICU1', 'nc|ENSG00000107745|Q9BPX6-3|MICU1', 'nc|ENSG00000107745|Q9BPX6-6|MICU1'] 74215 6849 NEGVATYAA True H1975_Epitope_Rep2 894.4083112014598 894.40776496793 31.263 1 0.07203376181946032 0.003600601891659501 0.01760975476306097 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 98240 14940 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48546993586 62.618 2 0.072032640314463 0.003600601891659501 0.017610183574124808 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 137013 20487 YALDLSTFL True H1975_Epitope_Rep3 1041.53826274185 1041.5371699358602 85.641 2 0.0720244979417377 0.003600601891659501 0.017613297126987205 ['ENSG00000137331|ENST00000259874|IER3'] 119342 4300 VAPAPAVVK True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 23.127 2 0.07201923413569636 0.003600601891659501 0.017615310219551098 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF'] 121822 16690 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 69.202 2 0.07200023503226055 0.003600601891659501 0.01762257802062967 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 138772 16472 YITERIIAV True PC9_epitope_Rep4 1076.62299542532 1076.62188993586 71.332 2 0.07199832790950145 0.003600601891659501 0.01762330771324725 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 115137 9655 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 47.496 2 0.0719964547483323 0.003600601891659501 0.01762402443893988 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 132239 17615 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 72.765 2 0.07199060679520315 0.003600601891659501 0.017626262208995425 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 2720 11329 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.47964993586 48.555 2 0.07198912562863477 0.003600601891659501 0.01762682903205507 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 49263 8413 KEQIDIYEA True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 37.344 2 0.07197990544232391 0.003600601891659501 0.017630357856713633 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 89595 17183 QYNTYPIKL True PC9_epitope_Rep3 1138.60225998074 1138.60116993586 71.251 2 0.07197052116496025 0.003600601891659501 0.017633950156165833 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 77434 8416 NSLPDTVQIR True NCI_RA007_Epitope_Rep5 1141.6091362663299 1141.60802993586 39.048 2 0.0719702131785298 0.003600601891659501 0.01763406806480834 ['ENSG00000242372|ENST00000374450|EIF6'] 2636 10554 AESEITIAP True H1975_Epitope_Rep3 929.4705771048499 929.46948993586 45.663 2 0.07196694990224324 0.003600601891659501 0.01763531741305139 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 74559 20212 NFTNVAATF True PC9_epitope_Rep5 983.4712458111899 983.47014993586 82.792 2 0.07195136905607905 0.003600601891659501 0.017641283685260523 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 103679 6473 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 29.704 2 0.07194971183279236 0.003600601891659501 0.017641918385097096 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 115409 19430 TRLPEFSEL True PC9_epitope_Rep1 1090.56587447202 1090.56537496793 79.549 1 0.0719488488972239 0.003600601891659501 0.017642248889114732 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 100440 20636 SLAGGIIGV True PC9_epitope_Rep1 785.46470387877 785.4641549679301 84.198 1 0.07194751212037358 0.003600601891659501 0.01764276088550902 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 8330 4457 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 23.788 2 0.07194004426988393 0.003600601891659501 0.017645621386348963 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 17508 13873 EHFPQAYSV True PC9_epitope_Rep1 1076.49270953176 1076.4916099358602 58.203 2 0.07193779515773467 0.003600601891659501 0.01764648297514165 ['ENSG00000076201|ENST00000265562|PTPN23'] 54473 19754 KYGPVFSF True PC9_epitope_Rep1 943.4803539429099 943.47924993586 80.811 2 0.07193646730353087 0.003600601891659501 0.017646991667196143 ['ENSG00000001630|ENST00000003100|CYP51A1'] 69550 13717 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45858993586 57.907 2 0.07193175797320026 0.003600601891659501 0.01764879588971589 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 122059 13586 VFYPNSNKF True PC9_epitope_Rep5 1114.54474510462 1114.54364993586 57.281 2 0.07192966816040564 0.003600601891659501 0.017649596586420263 ['ENSG00000160345|ENST00000429260|PIERCE1'] 104756 20021 SQVPHLPVLV True PC9_epitope_Rep3 1087.6389798426299 1087.6378899358601 82.259 2 0.07190620722462182 0.003600601891659501 0.01765858778619062 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 39428 10224 HKVLPLEAL True NCI_RA007_Epitope_Rep4 1018.6175161220599 1018.61640993586 46.182 2 0.0719008422410431 0.003600601891659501 0.01766064446594568 ['ENSG00000089154|ENST00000300648|GCN1'] 39343 13119 HKDAYQVIL True PC9_epitope_Rep1 1085.5869442697701 1085.58584993586 55.33 2 0.07188662924333503 0.003600601891659501 0.017666094127248965 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'ENST00000530300.1_1_11:43333659-43340360:+|nuORF'] 54597 13901 KYKGIFNGF True PC9_epitope_Rep4 1072.5705659296398 1072.56946993586 61.372 2 0.0718855833131217 0.003600601891659501 0.01766649522775235 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'SLC25A3|p.A284Lfs*8|1|0.17|ENSG00000075415|chr12:98601203-98601203|G/-|frameshift_variant', 'ENST00000547908.1_1_12:98989476-98991822:+|nuORF'] 70205 13465 LVQGELVTA True PC9_epitope_Rep4 928.5229470308799 928.52239496793 59.69 1 0.07187629883426873 0.003600601891659501 0.017670056073562746 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1'] 6116 14828 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 61.855 2 0.07187216897894426 0.003600601891659501 0.017671640197245066 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 26450 18428 FIDDANYSV True PC9_epitope_Rep5 1042.4607406971402 1042.46017496793 75.904 1 0.07187101902830842 0.003600601891659501 0.017672081317008037 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 128737 5409 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 26.2 2 0.07186675640605497 0.003600601891659501 0.017673716543124305 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 128229 18204 VPNLQTVSV True PC9_epitope_Rep3 955.53384606775 955.53274993586 75.233 2 0.07185916563610417 0.003600601891659501 0.017676628859730856 ['ENSG00000105866|ENST00000222584|SP4'] 116695 7569 TVDARVYSY True H1975_Epitope_Rep1 1072.5189242796 1072.5178299358602 34.105 2 0.07185301316009722 0.003600601891659501 0.01767898967894724 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 21923 11590 ESDSTIVYY True H1975_Epitope_Rep2 1075.47097102767 1075.47037496793 49.645 1 0.07185228553869066 0.003600601891659501 0.01767926890010891 ['ENST00000423257.1_1_17:17360441-17360570:+|nuORF', 'ENST00000485209.5_1_1:184027321-184041978:+|nuORF', 'ENSG00000198860|ENST00000645668|TSEN15'] 27434 24218 FLYPFPLAL True PC9_epitope_Rep2 1079.60555445603 1079.6044499358602 98.693 2 0.071850775144809 0.003600601891659501 0.01767984851943525 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 1898 13891 AEIGAVTLV True H1975_Epitope_Rep2 871.50148331031 871.50038993586 58.576 2 0.07184654113105177 0.003600601891659501 0.017681473432020325 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 24176 14934 EYQKVWNLF True NCI_RA007_Epitope_Rep3 1225.6131590176099 1225.61206993586 66.184 2 0.07184485932820883 0.003600601891659501 0.017682118905890064 ['ENSG00000059378|ENST00000263549|PARP12'] 118505 10849 TYQDIQNTI True NCI_RA007_Epitope_Rep5 1094.52440358286 1094.52387496793 48.366 1 0.07183102336076953 0.003600601891659501 0.01768742996226711 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 109051 19324 TAISLFYEL True NCI_RA007_Epitope_Rep4 1055.5539128059902 1055.55337496793 83.57 1 0.07182285985314639 0.003600601891659501 0.017690564289187978 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 106353 3717 STHGTFLNK True NCI_RA007_Epitope_Rep4 1003.50869394907 1003.50758993586 20.431 2 0.07181885136784942 0.003600601891659501 0.017692103510118327 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 44762 9091 IMDDPAGNSY True H1975_Epitope_Rep1 1081.43862535357 1081.43752993586 39.872 2 0.0718139814092497 0.003600601891659501 0.01769397369577116 ['ENSG00000109917|ENST00000227322|ZPR1'] 77337 11355 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 48.726 1 0.07180682733723288 0.003600601891659501 0.017696721370294783 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 44534 8556 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 42.678 3 0.07180406586460533 0.003600601891659501 0.017697782078766378 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 114767 6082 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.54912993586 30.01 2 0.07180318102029994 0.003600601891659501 0.017698121968528876 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 104063 16588 SQDPTMIGV True PC9_epitope_Rep3 946.44298245802 946.44188993586 68.942 2 0.07179558343044164 0.003600601891659501 0.01770104063268083 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 88801 9343 QTVAVGVIK True PC9_epitope_Rep1 913.5596668927699 913.55856993586 40.795 2 0.07179229605504087 0.003600601891659501 0.01770230363785126 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 120678 12445 VEIPDPVEA True H1975_Epitope_Rep3 967.4862271689899 967.4856749679301 53.062 1 0.07178516482720039 0.003600601891659501 0.017705043733045503 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 8905 9274 AVFPSIVGRPR True NCI_RA007_Epitope_Rep1 1197.69822605425 1197.6965849037902 40.071 3 0.07178361136349906 0.003600601891659501 0.017705640686383122 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 9209 20370 AVMPTLIQA True PC9_epitope_Rep5 942.5208388558998 942.51974993586 83.388 2 0.07177657538768853 0.003600601891659501 0.017708344651799476 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 44637 16114 ILSEVQQAV True PC9_epitope_Rep5 985.54441075145 985.54330993586 66.972 2 0.07177320712126138 0.003600601891659501 0.0177096392311571 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 11970 16832 DHNLLLYEA True PC9_epitope_Rep6 1086.53457434374 1086.53346993586 77.257 2 0.0717570951891491 0.003600601891659501 0.01771583299946145 ['ENSG00000183751|ENST00000568546|TBL3'] 96082 13367 RYLTVATVF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 58.574 2 0.07175426658113296 0.003600601891659501 0.017716920583506532 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 88131 15298 QRSDIATLL True PC9_epitope_Rep4 1015.56620882519 1015.56510993586 66.776 2 0.07174823480119816 0.003600601891659501 0.01771923997600704 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15', 'ENST00000546718.5_1_12:62654195-62688116:+|nuORF', 'ENST00000551206.5_1_12:62654195-62696719:+|nuORF', 'ENST00000537297.2_1_12:62654195-62698555:+|nuORF', 'ENST00000548524.5_1_12:62654195-62708744:+|nuORF', 'ENST00000550632.5_1_12:62654195-62749153:+|nuORF', 'nc|ENSG00000135655|Q9Y4E8-4|USP15'] 107739 4681 SVSLPSVKK True NCI_RA007_Epitope_Rep3 943.57023157647 943.56912993586 25.359 2 0.07174159118904157 0.003600601891659501 0.017721794961236915 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A', 'RNF19A|p.R281Vfs*13|1|0.05|ENSG00000034677|chr8:100274980-100274995|TAATGGATGAAGAACG/-|frameshift_variant'] 88578 6146 QTDLHEHPLY True H1975_Epitope_Rep2 1251.58840082175 1251.58675490379 28.613 3 0.07173892420414416 0.003600601891659501 0.01772282072025588 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 39641 19437 HLPEELAEL True PC9_epitope_Rep3 1049.53932537101 1049.53822993586 79.991 2 0.07172128047015722 0.003600601891659501 0.017729608128926724 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 138648 21446 YIGPVLVSV True PC9_epitope_Rep3 945.55351888317 945.55242993586 87.783 2 0.07171822674602571 0.003600601891659501 0.017730783117629476 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 121185 8081 VESGVPQPP True H1975_Epitope_Rep2 908.4603467743198 908.45924993586 36.031 2 0.0717030497285684 0.003600601891659501 0.017736623885465645 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 42827 15900 IEQEGYWLP True H1975_Epitope_Rep2 1133.53932537101 1133.5387749679298 66.361 1 0.0716942296923605 0.003600601891659501 0.017740019033195085 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 2273 7692 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.4390649679301 34.568 1 0.07166017993861122 0.003600601891659501 0.017753131653929385 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 89452 12198 QYESKVFYL True NCI_RA007_Epitope_Rep4 1175.5862755634298 1175.5851699358602 53.914 2 0.07166001009070465 0.003600601891659501 0.017753197085168117 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 95200 16073 RVIGTLLGT True PC9_epitope_Rep1 928.57056592964 928.56946993586 66.64 2 0.0716575807275686 0.003600601891659501 0.017754132983623775 ['ENSG00000175390|ENST00000651655|EIF3F', 'ENST00000528653.1_1_11:8009127-8013479:+|nuORF'] 48973 11840 KEEVWSFEA True H1975_Epitope_Rep2 1123.51858992643 1123.51748993586 50.618 2 0.07163946410622543 0.003600601891659501 0.01776111375181813 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 101293 19258 SLIGHLQTL True PC9_epitope_Rep3 980.5654805492001 980.56438993586 79.297 2 0.07163448139264089 0.003600601891659501 0.017763034156657993 ['DUSP5|p.S336C|1|0.22|ENSG00000138166|chr10:110510278-110510278|C/G|missense_variant', 'ENSG00000138166|ENST00000369583|DUSP5'] 96073 19672 RYLTVAAVF True PC9_epitope_Rep2 1038.5862159937797 1038.5851099358601 81.055 2 0.07162784609502167 0.003600601891659501 0.017765591788338468 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 133610 10136 VYADQPHIF True NCI_RA007_Epitope_Rep3 1088.52909504048 1088.5279899358602 46.959 2 0.07162531580922668 0.003600601891659501 0.01776656719831017 ['ENSG00000100439|ENST00000428304|ABHD4'] 40541 17723 HRFPFSSAL True PC9_epitope_Rep3 1060.5454138109599 1060.5443099358602 73.368 2 0.07161672920352431 0.003600601891659501 0.017769877653185558 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 4203 21017 AIAPIIAAV True PC9_epitope_Rep3 837.53238951577 837.53128993586 86.119 2 0.07161438025945059 0.003600601891659501 0.01777078335778538 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF'] 68229 7321 LTEAGDYTAKY True H1975_Epitope_Rep3 1230.57683307854 1230.5757299358602 33.135 2 0.07161329044094183 0.003600601891659501 0.01777120358395024 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 2437 11468 AEQIVPLSA True H1975_Epitope_Rep1 926.5072969667399 926.5067449679301 49.094 1 0.07160883568637977 0.003600601891659501 0.017772921400961626 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 30078 12000 FYISPVNKL True NCI_RA007_Epitope_Rep4 1079.60153170475 1079.6004299358601 53.162 2 0.07160831293555645 0.003600601891659501 0.017773122991235502 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 97856 12548 SELPIVTPA True H1975_Epitope_Rep2 925.51204799401 925.51094993586 53.36 2 0.07159697254939912 0.003600601891659501 0.01777749674658365 ['ENSG00000182481|ENST00000330459|KPNA2'] 74349 7188 NEQGSYVVA True H1975_Epitope_Rep3 965.4454249861698 965.4448749679301 32.623 1 0.07157455284936098 0.003600601891659501 0.017786146502081313 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 103266 11748 SPLLLQAKA True PC9_epitope_Rep2 939.5753169569099 939.57420993586 50.522 2 0.07156729093710924 0.003600601891659501 0.017788949060049346 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 85331 6411 QESPGGLEA True H1975_Epitope_Rep3 886.4032258210199 886.40267496793 29.637 1 0.07156633225311478 0.003600601891659501 0.017789319071334686 ['ENSG00000121892|ENST00000303538|PDS5A', 'chr4:39825488-39837932|110|16.31|0.92|4.15|-|2|PDS5A,None|1'] 92476 14286 RLTPKLMEV True PC9_epitope_Rep5 1085.6267009067699 1085.6256099358602 59.955 2 0.07156609094603487 0.003600601891659501 0.017789412206737288 ['ENSG00000147677|ENST00000521861|EIF3H'] 85797 6020 QHDPSAVAV True PC9_epitope_Rep5 922.4508447197799 922.44974993586 28.149 2 0.0715624402750094 0.003600601891659501 0.017790821282747202 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 126041 5870 VLEDSDLK True NCI_RA007_Epitope_Rep1 917.4705771048499 917.46948993586 26.886 2 0.07155401864026353 0.003600601891659501 0.01779407223674182 ['ENSG00000044574|ENST00000324460|HSPA5'] 134376 15199 VYPESFREL True PC9_epitope_Rep4 1138.56587447202 1138.56476993586 66.386 2 0.0715525538597234 0.003600601891659501 0.017794637733526512 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 47404 21227 IVLDRLIEL True PC9_epitope_Rep2 1082.66994561774 1082.6688499358602 87.109 2 0.07153534200830974 0.003600601891659501 0.01780128383082523 ['ENSG00000129083|ENST00000439561|COPB1'] 35217 9655 GRAPGGLSL True PC9_epitope_Rep4 826.4661008611 826.4650099358599 44.763 2 0.07153386225585079 0.003600601891659501 0.017801855322311714 ['ENSG00000171223|ENST00000302754|JUNB'] 6566 11806 APVAEVPTA True PC9_epitope_Rep3 853.4545331178899 853.45342993586 50.429 2 0.07151178195677783 0.003600601891659501 0.017810384918811647 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 60797 19218 LHSLPIVSM True PC9_epitope_Rep3 995.54738795691 995.54628993586 79.141 2 0.07149987903269744 0.0036264976091978725 0.01781498457663096 ['ENSG00000125484|ENST00000372146|GTF3C4'] 114228 6247 TPMGPGRTV True PC9_epitope_Rep3 914.46438660894 914.46328993586 29.067 2 0.07149732170446131 0.0036264976091978725 0.017815972950937033 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 73484 20593 M[Oxidation]VDGTLLLL True PC9_epitope_Rep6 989.5467196310099 989.54562993586 91.94 2 0.07149157603621055 0.0036264976091978725 0.017818193762747337 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 9857 12955 AYLHTTTTF True PC9_epitope_Rep1 1053.51311062317 1053.51200993586 54.704 2 0.07148148668328336 0.0036264976091978725 0.017822094113255308 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 89724 9620 RADDTFEAL True NCI_RA007_Epitope_Rep4 1036.48253877088 1036.4814499358602 43.852 2 0.07147669213408137 0.0036264976091978725 0.017823947871350426 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 12709 6308 DLEAHIDSANK True PC9_epitope_Rep2 1211.57823006087 1211.57659490379 29.663 3 0.07146854460085678 0.0036264976091978725 0.017827098432429737 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 56125 9863 LAVDPNRAV True PC9_epitope_Rep5 953.5294293936499 953.52832993586 42.908 2 0.07146699251675898 0.0036264976091978725 0.01782769866470344 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16', 'ENST00000504821.1_1_5:175813909-175815568:-|nuORF'] 72298 10377 MIDVTKSYY True H1975_Epitope_Rep2 1118.5317974624202 1118.5307099358602 44.926 2 0.07145976371565498 0.0036264976091978725 0.017830494481376656 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5'] 10024 5941 AYRQGHFTY True PC9_epitope_Rep2 1141.53049202281 1141.52884490379 28.241 3 0.07145958725733252 0.0036264976091978725 0.017830562733611707 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 1317 7329 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 33.131 1 0.07145792040656407 0.0036264976091978725 0.017831207466011693 ['ENSG00000012174|ENST00000379484|MBTPS2'] 42979 7045 IESRTLAIA True NCI_RA007_Epitope_Rep3 972.5603951687599 972.55928993586 34.83 2 0.07144037946243965 0.003650516709166555 0.017837993555229976 ['ENSG00000147872|ENST00000276914|PLIN2'] 38066 11245 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.44900993586 48.579 2 0.07143081199074233 0.003650516709166555 0.017841695944519967 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 6705 8712 AQAPDLQRV True PC9_epitope_Rep1 996.5352430500799 996.53414993586 38.349 2 0.0713925488169885 0.003650516709166555 0.01785651002180774 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 141672 22277 YTTDFIYQL True PC9_epitope_Rep5 1162.55464108198 1162.5540749679299 90.695 1 0.07139224844027471 0.003650516709166555 0.01785662636155962 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 40994 5406 HTEVPARNLY True H1975_Epitope_Rep2 1198.6094706195 1198.60783490379 25.827 3 0.07139164948032886 0.003650516709166555 0.017856858348520997 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 97362 7484 SEDISHITP True H1975_Epitope_Rep3 997.47163973401 997.47054993586 33.768 2 0.07138653362127496 0.003650516709166555 0.017858839917985054 ['ENSG00000138175|ENST00000260746|ARL3'] 45278 19958 IPVSGITVV True PC9_epitope_Rep1 883.53786881903 883.53676993586 81.592 2 0.07137113506476249 0.003650516709166555 0.017864805602034402 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 96016 14790 RYLPDTLLL True NCI_RA007_Epitope_Rep5 1102.63864548946 1102.63754993586 63.561 2 0.07134747472714877 0.003650516709166555 0.01787397564955831 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 105677 16761 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.51187496793 69.709 1 0.07134160530214535 0.003650516709166555 0.017876251140086365 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 72009 6697 METAAAVAA True H1975_Epitope_Rep3 833.3953039896098 833.39475496793 30.715 1 0.07132144070854661 0.003650516709166555 0.01788407070381194 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 32847 10013 GHNLQTVQL True PC9_epitope_Rep4 1008.53524305008 1008.53414993586 46.177 2 0.07130912614890356 0.003650516709166555 0.017888847685962342 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 99232 6445 SHMEGVASV True PC9_epitope_Rep2 915.4120166829099 915.41090993586 30.205 2 0.07130702023658898 0.003650516709166555 0.01788966471580467 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 17403 7756 EHDPRVITV True PC9_epitope_Rep2 1064.56145779792 1064.56036993586 35.208 2 0.07130096022087459 0.003650516709166555 0.0178920160101878 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 104087 16769 SQDTSFTTL True PC9_epitope_Rep5 998.4556553167 998.45454993586 69.506 2 0.0712957654064032 0.003650516709166555 0.017894031833166377 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 124965 11974 VHTIVNETL True PC9_epitope_Rep2 1024.55530978832 1024.5542099358602 51.377 2 0.07129333333583547 0.003650516709166555 0.01789497565884688 ['ENSG00000023516|ENST00000025301|AKAP11'] 41417 9123 HYGQSGISM True PC9_epitope_Rep1 978.4229157197799 978.42180993586 39.942 2 0.07129255153499453 0.003650516709166555 0.017895279065967985 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 1240 6644 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 30.464 1 0.07128287522801287 0.003650516709166555 0.017899034714062654 ['ENSG00000162783|ENST00000367577|IER5'] 93094 7628 RPNPPPVSV True PC9_epitope_Rep2 961.53451477409 961.53340993586 34.712 2 0.07127052542622572 0.003650516709166555 0.017903829081495987 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 68950 6186 LTPEELER True NCI_RA007_Epitope_Rep3 985.5080252427299 985.50692993586 31.339 2 0.07126810408206434 0.003650516709166555 0.017904769220944375 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 24099 19035 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5802749679299 78.246 1 0.07125828323738356 0.003650516709166555 0.01790858284599422 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 31680 10214 GEFSITYKP True NCI_RA007_Epitope_Rep4 1040.5178616504397 1040.51727496793 46.144 1 0.07124842022748455 0.003650516709166555 0.01791241360180106 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 77877 10210 NVHAVFQEA True PC9_epitope_Rep1 1013.4930438849299 1013.49194993586 44.151 2 0.07124568080301893 0.003650516709166555 0.017913477718584418 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 8983 21138 AVGLAVLNV True PC9_epitope_Rep4 854.52255310806 854.52144993586 89.469 2 0.0712447565491076 0.003650516709166555 0.017913836753957475 ['ENSG00000175309|ENST00000308158|PHYKPL', 'nc|ENSG00000175309|Q8IUZ5-3|PHYKPL', 'ENST00000481811.5_1_5:177638924-177642644:-|nuORF', 'ENST00000493197.5_1_5:177638946-177656967:-|nuORF'] 40768 15046 HRTEMDWVL True PC9_epitope_Rep6 1185.5600778989299 1185.55843490379 69.913 3 0.07124415612641634 0.003650516709166555 0.01791406999753154 ['ENSG00000169813|ENST00000682386|HNRNPF'] 99842 16344 SILFVPTSAPR True PC9_epitope_Rep6 1186.6710082468999 1186.66990993586 75.241 2 0.07123394498064685 0.003650516709166555 0.017918037107320314 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 6639 18776 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 77.442 2 0.07123311299312565 0.003650516709166555 0.017918360376809245 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 103790 14146 SPVVPQISA True PC9_epitope_Rep6 896.4967322830399 896.49562993586 66.284 2 0.07122987768342023 0.003650516709166555 0.01791961751060822 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 77999 20216 NVPEGLLATV True PC9_epitope_Rep4 1011.56006081559 1011.55896993586 85.9 2 0.07122777540947305 0.003650516709166555 0.017920434428162303 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 4672 16790 ALAPGLPTA True PC9_epitope_Rep2 809.46470387877 809.4641549679301 69.83 1 0.07122774448734723 0.003650516709166555 0.01792044644437386 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 120705 7168 VEKIGEISA True H1975_Epitope_Rep2 944.51786165044 944.51676993586 32.505 2 0.07119830718328614 0.0036726268664718656 0.017931889045859063 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7668832-7673976:+|nuORF', 'DNAH2|p.A1358V|1|0.12|ENSG00000183914|chr17:7770383-7770383|C/T|missense_variant'] 101483 24380 SLLDELLEV True PC9_epitope_Rep2 1029.55939210925 1029.55828993586 99.344 2 0.07119198651960862 0.0036726268664718656 0.01793434683911838 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 106493 2638 STLEPVEK True NCI_RA007_Epitope_Rep5 901.47566248529 901.47456993586 14.834 2 0.07118993709023863 0.0036726268664718656 0.017935143827739967 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 88683 4899 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 23.927 2 0.07118631092202109 0.0036726268664718656 0.017936554063949603 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 111052 15897 THDGSILIV True PC9_epitope_Rep3 953.51819600361 953.51708993586 66.295 2 0.0711719522245014 0.0036726268664718656 0.017942139246670857 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 17260 15786 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 65.537 2 0.07116551533623067 0.0036726268664718656 0.01794464356185002 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 142515 8125 YYINGKTGL True NCI_RA007_Epitope_Rep3 1027.53384606775 1027.53274993586 39.065 2 0.0711643766011418 0.0036726268664718656 0.017945086628182144 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 134670 14108 VYSRTFTWL True NCI_RA007_Epitope_Rep5 1171.6025943339098 1171.6014899358602 60.957 2 0.07115146939015032 0.0036726268664718656 0.01795010935665429 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 89697 6404 RAAEPVQL True H1975_Epitope_Rep2 882.4923156089399 882.49120993586 29.556 2 0.07112128828203497 0.0036726268664718656 0.0179618591531459 ['ENSG00000107159|ENST00000378357|CA9'] 128422 8882 VPRQPTVTSV True PC9_epitope_Rep3 1082.60840799034 1082.60730993586 39.114 2 0.07110420398822659 0.0036726268664718656 0.01796851339003252 ['ENSG00000163110|ENST00000317968|PDLIM5'] 75222 14449 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 60.733 2 0.07110347571781944 0.0036726268664718656 0.01796879709800618 ['ENSG00000116285|ENST00000377482|ERRFI1'] 99747 21597 SIIGRLLEV True PC9_epitope_Rep5 998.6124307416198 998.61132993586 88.113 2 0.07109839839165717 0.0036726268664718656 0.017970775157052324 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 12382 8852 DISLSDYK True H1975_Epitope_Rep1 939.45492704071 939.4543749679301 38.971 1 0.07109409297907267 0.0036726268664718656 0.017972452646773628 ['ENSG00000117450|ENST00000319248|PRDX1'] 54866 20828 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61157496793 88.265 1 0.07109215056533857 0.0036726268664718656 0.01797320950418594 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 12596 18741 DLADELALVD True H1975_Epitope_Rep3 1072.52882025696 1072.5277299358602 78.592 2 0.07108788570654648 0.0036726268664718656 0.01797487140095907 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENSG00000166796|ENST00000541669|LDHC', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF'] 36517 6152 GVGPVPARA True PC9_epitope_Rep1 822.47118624154 822.47008993586 28.478 2 0.071083508721357 0.0036726268664718656 0.01797657713822439 ['ENSG00000129636|ENST00000320640|ITFG1'] 107190 23380 SVINFLDQL True PC9_epitope_Rep3 1047.5600608155898 1047.5589699358602 95.21 2 0.07108148011327226 0.0036726268664718656 0.017977367749740448 ['ENSG00000196976|ENST00000357360|LAGE3'] 111466 11921 THTTPVLL True PC9_epitope_Rep5 880.5018176634799 880.50072993586 50.851 2 0.07108005105459125 0.0036726268664718656 0.01797792471758041 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 141802 19724 YVDDFGVSV True PC9_epitope_Rep4 999.4549270407099 999.45382993586 83.991 2 0.07106014204245328 0.0036726268664718656 0.017985685808768664 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 55686 21304 LALFPGVAL True PC9_epitope_Rep6 899.5480395799099 899.54694993586 94.799 2 0.07105514125438747 0.0036726268664718656 0.017987635743629084 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 21859 10205 ESDDGVVVY True H1975_Epitope_Rep3 981.4291062156899 981.42855496793 44.299 1 0.07104708836813481 0.0036726268664718656 0.01799077618086639 ['ENSG00000137628|ENST00000393743|DDX60'] 90271 9785 REEFPTLQA True H1975_Epitope_Rep3 1089.5454733806098 1089.54436993586 42.662 2 0.07103627068973507 0.0036726268664718656 0.017994995621418108 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 119644 21250 VAVAGLLTV True PC9_epitope_Rep2 841.52730413533 841.5267549679301 87.199 1 0.07103579981121409 0.0036726268664718656 0.017995179308616105 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 103595 9860 SPSSSTALASC True PC9_epitope_Rep5 1009.4386253535699 1009.43752993586 42.896 2 0.0710325840434187 0.0036726268664718656 0.01799643380888602 ['ENSG00000146072|ENST00000296861|TNFRSF21'] 139730 22082 YNTLLPYTF True PC9_epitope_Rep3 1130.56481184286 1130.56370993586 90.234 2 0.07102159275981915 0.0036726268664718656 0.018000722220014333 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 2660 7386 AESLQPVAA True NCI_RA007_Epitope_Rep3 884.4603467743199 884.4597949679301 36.181 1 0.07101495085049545 0.0036726268664718656 0.018003314117354282 ['ENSG00000038219|ENST00000040738|BOD1L1'] 17864 15210 EHVPGADIL True PC9_epitope_Rep3 949.4868958753299 949.48578993586 63.651 2 0.07101350058566425 0.0036726268664718656 0.018003880105633568 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 137087 19766 YAQGLLTGV True PC9_epitope_Rep5 920.4967322830399 920.49562993586 81.073 2 0.07100279450667363 0.0036726268664718656 0.018008058828287144 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 39250 18241 HIIGGVIAV True PC9_epitope_Rep5 877.53853752537 877.53744993586 75.178 2 0.07098882402306628 0.0036726268664718656 0.018013513041236422 ['ENST00000550528.5_1_12:58133675-58140075:+|nuORF', 'ENST00000546993.5_1_12:58138937-58140584:+|nuORF', 'ENSG00000135452|ENST00000257910|TSPAN31'] 673 13996 AATSLITTL True H1975_Epitope_Rep2 889.5120479940101 889.51149496793 58.985 1 0.0709860523371068 0.0036726268664718656 0.01801459531625551 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 74153 9117 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.50377496793 40.022 1 0.0709749945333186 0.0036726268664718656 0.01801891371520026 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'nc|ENSG00000206341|P01893|HLA-H'] 139747 9728 YPAQTYTA True PC9_epitope_Rep1 913.4181476091699 913.41704993586 42.276 2 0.07095915134490223 0.0036726268664718656 0.018025102618539447 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'ENST00000481203.1_1_3:100463567-100467372:+|nuORF'] 98019 11312 SEQFETVAV True H1975_Epitope_Rep2 1008.4763907612798 1008.47587496793 48.559 1 0.07095281577028568 0.0036726268664718656 0.018027578066320816 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 39974 9679 HPLLGVSA True PC9_epitope_Rep4 792.4493881678001 792.4488349679301 44.86 1 0.07093587116333662 0.0036726268664718656 0.018034200242099264 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 118404 14414 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47054993586 60.712 2 0.07093535691745974 0.0036726268664718656 0.01803440125137418 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 134880 14540 VYVQHPITF True PC9_epitope_Rep4 1102.5811306133398 1102.58002993586 63.842 2 0.07092904322501971 0.0036726268664718656 0.01803686932694136 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 107168 16656 SVIGVSPAV True PC9_epitope_Rep3 827.47526856247 827.47416993586 69.203 2 0.07090113218193014 0.0036726268664718656 0.018047783735992952 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 6286 2547 APRGPGTVPA True PC9_epitope_Rep4 921.5032146458099 921.50210993586 14.717 2 0.0709010617280014 0.0036726268664718656 0.018047811294220725 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 125197 14601 VIIEKTYSL True PC9_epitope_Rep2 1064.61176203528 1064.6106699358602 61.431 2 0.07090103208860972 0.0036726268664718656 0.018047822887753435 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 7664 7977 ASITALEAK True PC9_epitope_Rep2 902.50729696674 902.50618993586 36.046 2 0.07089247397755503 0.0036726268664718656 0.018051170705751216 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 96425 18198 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41211496793 75.209 1 0.07089175381650287 0.0036726268664718656 0.018051452449296658 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 12045 8197 DHSQAVTL True PC9_epitope_Rep1 869.42429561877 869.42318993586 36.363 2 0.07088017809532761 0.0036726268664718656 0.01805598169596644 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'SYNE2|p.K820Rfs*19|1|0.06|ENSG00000054654|chr14:63990554-63990555|TA/-|frameshift_variant', 'SYNE2|p.D684*|1|0.14|ENSG00000054654|chr14:63983780-63983781|-/T|frameshift_variant'] 102385 9968 SLTGHISTV True PC9_epitope_Rep1 913.4868958753301 913.48578993586 43.206 2 0.07087925922967829 0.0036726268664718656 0.018056341266725253 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 21215 5221 ERDPGGITA True PC9_epitope_Rep1 914.4457593393399 914.44466993586 24.931 2 0.07087376012293187 0.0036726268664718656 0.01805849331724019 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 35585 7653 GTAGNGWFNK True NCI_RA007_Epitope_Rep4 1050.48829285766 1050.4871899358602 36.091 2 0.07087235031128138 0.0036726268664718656 0.01805904507888218 ['ENST00000525241.1_1_11:35211476-35226207:+|nuORF', 'ENST00000534296.5_1_11:35211476-35226207:+|nuORF'] 5976 12900 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 54.632 2 0.07086337631600093 0.0036726268664718656 0.01806255762054936 ['ENSG00000183856|ENST00000361170|IQGAP3'] 137736 6536 YENEVALR True PC9_epitope_Rep6 992.4927095317598 992.49160993586 33.814 2 0.07084614954684079 0.0036726268664718656 0.018069302180579633 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 105018 19837 SRDLSLLI True PC9_epitope_Rep1 915.5389314481899 915.53782993586 81.119 2 0.07084014211809067 0.0036726268664718656 0.0180716547347433 ['ENSG00000242550|ENST00000238508|SERPINB10'] 26436 18526 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.4596499358602 76.049 2 0.07082248046906897 0.0036989385654551303 0.01807857281122454 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 97639 12880 SEFSSVLAA True H1975_Epitope_Rep2 909.4443623570098 909.44381496793 54.655 1 0.07080319609988055 0.0036989385654551303 0.01808612930762082 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7', 'nc|ENSG00000292366|P51809-3|VAMP7'] 17385 13994 EHDPHVLLAV True PC9_epitope_Rep5 1128.5927579262 1128.59110490379 58.85 3 0.07079153800159202 0.0036989385654551303 0.018090698900709468 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 120622 11014 VEIAYSDVA True H1975_Epitope_Rep3 965.4705771048499 965.46948993586 47.455 2 0.07078726665960218 0.0036989385654551303 0.018092373394502072 ['ENSG00000169504|ENST00000374379|CLIC4'] 8311 16902 ATINEVVQV True PC9_epitope_Rep4 971.52876068731 971.52766993586 72.998 2 0.07078439960169815 0.0036989385654551303 0.01809349744740608 ['ENSG00000171940|ENST00000371471|ZNF217'] 109019 21288 TAIDILTTC True PC9_epitope_Rep5 949.4790336135701 949.4784849679301 86.938 1 0.07077899567731592 0.003708347784328896 0.01809561627477777 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 126715 15185 VLPGHFNTF True PC9_epitope_Rep4 1030.5236157372199 1030.5225099358602 66.333 2 0.07076821073321801 0.003708347784328896 0.018099845635406835 ['ENSG00000176055|ENST00000316610|MBLAC2'] 109965 5909 TEHSPPLPP True H1975_Epitope_Rep3 973.4868958753299 973.48578993586 27.739 2 0.07076351306781209 0.003708347784328896 0.018101688130458468 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 101292 18065 SLIGHLQTL True PC9_epitope_Rep2 980.5654805492001 980.56438993586 74.789 2 0.07076270288094776 0.003708347784328896 0.01810200591548824 ['DUSP5|p.S336C|1|0.22|ENSG00000138166|chr10:110510278-110510278|C/G|missense_variant', 'ENSG00000138166|ENST00000369583|DUSP5'] 104909 17701 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.49147496793 72.882 1 0.07076010425378361 0.003708347784328896 0.018103025227299813 ['ENSG00000113387|ENST00000265073|SUB1'] 6138 12975 APMPPIIHA True PC9_epitope_Rep6 945.51060852537 945.50950993586 61.477 2 0.07075445621701816 0.003708347784328896 0.01810524085360673 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 140841 14415 YSDPSVLYM True H1975_Epitope_Rep2 1073.47394823313 1073.4733749679299 60.599 1 0.07075253467293702 0.003708347784328896 0.018105994699052566 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Nfs*41|1|0.31|ENSG00000068024|chr2:239053574-239053593|GTGCGCTGCAGGCAGCGCCA/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 101794 9079 SLPDFPAAAK True NCI_RA007_Epitope_Rep3 1015.5338460677499 1015.53274993586 42.8 2 0.07074925859557986 0.003708347784328896 0.018107280011600706 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'NLRC5|p.L1674Rfs*17|1|0.22|ENSG00000140853|chr16:57077960-57077960|T/-|frameshift_variant', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'ENST00000539881.5_1_16:57068826-57081664:+|nuORF', 'ENST00000538930.5_1_16:57075247-57096263:+|nuORF'] 62720 20323 LLLPDVIKV True PC9_epitope_Rep4 1008.6583183048799 1008.65722993586 86.315 2 0.07074889461754268 0.003708347784328896 0.01810742281732962 ['ENSG00000109436|ENST00000442267|TBC1D9', 'TBC1D9|p.G735Efs*4|1|0.16|ENSG00000109436|chr4:140657530-140657530|C/-|frameshift_variant', 'TBC1D9|p.K359Rfs*20|1|0.42|ENSG00000109436|chr4:140670910-140670910|T/-|frameshift_variant'] 2505 5806 AEQMHPAPYEA True H1975_Epitope_Rep2 1242.5339227207398 1242.53282993586 27.323 2 0.07073706246365724 0.003708347784328896 0.018112065696432145 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2'] 77929 16892 NVKEMWTEV True PC9_epitope_Rep5 1134.53794547202 1134.5368499358601 69.987 2 0.07072862627288631 0.003708347784328896 0.018115376689125516 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 57922 7149 LEGGQTPIA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 32.433 2 0.0707228091615272 0.003708347784328896 0.018117660085340423 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 128046 9767 VPKNSDPWAA True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 42.522 2 0.07072202736257371 0.003708347784328896 0.018117966985927707 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 111214 16202 THISPNAIF True PC9_epitope_Rep3 998.5185303567799 998.51742993586 67.46 2 0.0707153099466739 0.003708347784328896 0.018120604152298603 ['ENSG00000125398|ENST00000245479|SOX9'] 27470 15535 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.45172993586 64.909 2 0.0707145779757849 0.003708347784328896 0.01812089153560608 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 34853 7450 GQKPGGSDFL True NCI_RA007_Epitope_Rep4 1004.4927095317599 1004.49160993586 35.301 2 0.07070975633501796 0.003708347784328896 0.018122784693180394 ['nc|ENSG00000128989|P56211-2|ARPP19', 'ENSG00000128989|ENST00000249822|ARPP19', 'nc|ENSG00000143420|O43768-6|ENSA', 'nc|ENSG00000143420|O43768-5|ENSA', 'nc|ENSG00000143420|O43768-2|ENSA', 'ENSG00000143420|ENST00000369014|ENSA', 'nc|ENSG00000143420|O43768-9|ENSA', 'nc|ENSG00000143420|O43768-7|ENSA', 'nc|ENSG00000143420|O43768-3|ENSA', 'nc|ENSG00000143420|O43768-4|ENSA', 'nc|ENSG00000143420|O43768-8|ENSA'] 52875 10064 KPFGQVIST True PC9_epitope_Rep4 975.5389314481899 975.53782993586 46.379 2 0.07068913191346797 0.003708347784328896 0.018130884683405422 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 99145 12381 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 55.43 2 0.07067919402327764 0.003708347784328896 0.0181347888647768 ['ENSG00000132646|ENST00000379143|PCNA'] 90860 9513 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 41.561 2 0.07067620306054852 0.003708347784328896 0.018135964041241744 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 102989 16846 SPFGSITSA True PC9_epitope_Rep5 865.4181476091701 865.4175949679301 69.807 1 0.07067516674272778 0.003708347784328896 0.01813637123638124 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 41421 7635 HYGQSGISM True PC9_epitope_Rep4 978.4229157197799 978.42180993586 36.748 2 0.07067173084425908 0.003708347784328896 0.018137721347186244 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 111580 21893 TIDDGIFEV True PC9_epitope_Rep1 1007.48114178855 1007.48057496793 89.024 1 0.0706652723941646 0.003708347784328896 0.018140259398971195 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 31575 10179 GEELAGAIAA True H1975_Epitope_Rep3 900.4552613938798 900.45416993586 44.198 2 0.07066503916084219 0.003708347784328896 0.01814035106151477 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 65361 10916 LRDQGGVVL True PC9_epitope_Rep5 955.5450794577898 955.5439899358599 46.978 2 0.07066233448108085 0.003708347784328896 0.018141414053397722 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 74858 18730 NHFPGSFQI True PC9_epitope_Rep5 1045.49812926537 1045.4970299358602 77.06 2 0.07065837803617613 0.003708347784328896 0.018142969117230852 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 53180 7842 KQDLPNAM True PC9_epitope_Rep1 915.44840219163 915.44730993586 34.99 2 0.07064882595642175 0.003708347784328896 0.018146724029998094 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 110229 4677 TEQQQRFHEI True H1975_Epitope_Rep3 1314.6316626160599 1314.6305699358602 23.114 2 0.0706472861570927 0.003708347784328896 0.018147329390844846 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 140936 11638 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.50207496793 49.757 1 0.0706282516167433 0.003708347784328896 0.01815481422481039 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 39753 17414 HLVPEVPTV True PC9_epitope_Rep3 989.55458151233 989.55348993586 72.153 2 0.07062553089594006 0.003708347784328896 0.018155884310270366 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 114229 5010 TPMGPGRTV True PC9_epitope_Rep4 914.46438660894 914.46328993586 25.892 2 0.07062354566958372 0.003708347784328896 0.01815666515557799 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 31182 17466 GAYSPIVLL True H1975_Epitope_Rep1 931.53786881903 931.5373249679301 72.669 1 0.07062299425259876 0.003708347784328896 0.018156882048887026 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 124488 7660 VGVNGFGR True PC9_epitope_Rep2 804.4242360491198 804.42312993586 34.834 2 0.07061408590398913 0.003708347784328896 0.01816038637408211 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 40861 15273 HSEQVFAL True PC9_epitope_Rep1 929.4606811274899 929.45958993586 63.567 2 0.07060769455309804 0.003708347784328896 0.018162900959898746 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 98102 15036 SESDVIIIP True H1975_Epitope_Rep2 971.5175272972699 971.5169749679301 62.988 1 0.07060264154556137 0.003708347784328896 0.018164889221683196 ['ENSG00000154845|ENST00000400556|PPP4R1', 'ENST00000580283.1_1_18:9594966-9614260:-|nuORF'] 104513 20435 SQNDGFFAV True PC9_epitope_Rep2 983.4348603024699 983.43376993586 84.03 2 0.07058590437307771 0.003708347784328896 0.01817147641738414 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 118516 16331 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.52387496793 67.952 1 0.07058261105589975 0.003708347784328896 0.018172772817983768 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 97574 7668 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 34.447 2 0.0705418453226715 0.003708347784328896 0.018188827167301656 ['nc|ENSG00000128951|P33316-2|DUT'] 30981 17890 GASENIVIQV True PC9_epitope_Rep4 1028.5502244078798 1028.54912993586 76.852 2 0.0705403855010483 0.003708347784328896 0.018189402317158404 ['ENSG00000106804|ENST00000223642|C5'] 120165 3732 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 19.352 2 0.07053053715019608 0.003708347784328896 0.018193282873135763 ['ENSG00000155506|ENST00000518297|LARP1'] 96340 9927 RYSSMAASF True PC9_epitope_Rep6 1018.4542158480599 1018.45310993586 48.702 2 0.07052802044993907 0.003708347784328896 0.018194274654054043 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 100394 12253 SKVSILESL True NCI_RA007_Epitope_Rep4 974.56481184286 974.56370993586 54.128 2 0.07051773121345806 0.003708347784328896 0.018198329955449028 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 93431 12941 RQFSTPFQL True NCI_RA007_Epitope_Rep4 1122.5821932425 1122.58108993586 56.868 2 0.0705161642755405 0.003708347784328896 0.01819894760677178 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 7266 14499 ARDFTVSAL True PC9_epitope_Rep2 978.5134449763399 978.51234993586 61.039 2 0.0705068735685214 0.003708347784328896 0.01820261019085065 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 64522 19757 LPRLPVPAV True PC9_epitope_Rep3 960.6120368187999 960.61092993586 81.223 2 0.07050173998079867 0.003708347784328896 0.018204634247196348 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 117274 14856 TVMDEIHTV True PC9_epitope_Rep2 1043.49574630687 1043.49464993586 62.408 2 0.07049780472942863 0.003708347784328896 0.01820618596790119 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 73901 14697 NAVYTFETL True NCI_RA007_Epitope_Rep3 1056.51277627 1056.51166993586 65.208 2 0.070492049073341 0.003708347784328896 0.018208455718214056 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 40129 13238 HPYLPINSA True PC9_epitope_Rep3 1010.51853035678 1010.51742993586 55.954 2 0.0704863242694128 0.003708347784328896 0.018210713561654886 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 28999 12488 FTEEQAVLY True H1975_Epitope_Rep2 1098.5233409536997 1098.52277496793 53.126 1 0.07048622859405222 0.003708347784328896 0.018210751297896472 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 131648 6035 VTLTSEEEAR True PC9_epitope_Rep2 1133.5564319871298 1133.55532993586 28.607 2 0.07048579985070684 0.003708347784328896 0.018210920403582395 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 85029 12568 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.53750993586 53.389 2 0.07046110728147188 0.003708347784328896 0.01822066214096063 ['ENSG00000139233|ENST00000266604|LLPH'] 72934 12874 MPWGDPNYRSA True PC9_epitope_Rep6 1292.5608061749201 1292.5597099358602 61.039 2 0.07043512087661069 0.003708347784328896 0.018230919530662477 ['ENSG00000124226|ENST00000244061|RNF114'] 104357 18260 SQISDTSVVL True PC9_epitope_Rep5 1047.5448046742702 1047.54427496793 75.251 1 0.07042685153366984 0.003708347784328896 0.018234184737528636 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 42478 4148 IEEELGSK True H1975_Epitope_Rep1 903.4549270407099 903.45382993586 20.885 2 0.07042455960245836 0.003708347784328896 0.01823508981806792 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 120182 5154 VEAPPPSSP True H1975_Epitope_Rep3 879.43379767331 879.43270993586 24.928 2 0.07042332595016881 0.003708347784328896 0.018235577002897387 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 78199 15692 NYENKQYLF True PC9_epitope_Rep1 1217.57168812845 1217.5705899358602 65.181 2 0.07042324411262725 0.003708347784328896 0.018235609321999365 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 9095 16274 AVIGDVIRV True PC9_epitope_Rep6 940.57056592964 940.56946993586 74.96 2 0.07042125406507382 0.003708347784328896 0.01823639524351655 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 9971 22837 AYPEYLITF True PC9_epitope_Rep5 1115.55391280599 1115.55337496793 92.839 1 0.07041461674420377 0.003708347784328896 0.018239016720650984 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP15|p.Q667E|1|0.22|ENSG00000173200|chr3:122636062-122636062|C/G|missense_variant', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 45797 7960 ISDAPAPAY True H1975_Epitope_Rep2 903.43379767331 903.43324496793 35.566 1 0.07040474648245561 0.003708347784328896 0.0182429157252694 ['ENSG00000168476|ENST00000306306|REEP4'] 7724 4958 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46125496793 24.106 1 0.07040083357115025 0.003708347784328896 0.01824446163826344 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 110074 9817 TELQPALSA True H1975_Epitope_Rep2 928.4865615221598 928.48546993586 42.745 2 0.07039515959524704 0.003708347784328896 0.01824670352794766 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000551842.5_1_12:57881873-57883359:+|nuORF', 'ENST00000553162.5_1_12:57881873-57883795:+|nuORF'] 29458 24505 FVEPFVILL True PC9_epitope_Rep5 1075.63176920387 1075.6306699358602 99.34 2 0.0703882603499937 0.003708347784328896 0.018249429886896245 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ATP2A2-IFT81|3|fusion', 'ATP2A1|p.S287Lfs*11|1|0.12|ENSG00000196296|chr16:28887646-28887647|-/G|frameshift_variant', 'ATP2A2-IFT81|2|fusion', 'nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1'] 76346 18137 NPVDILTYV True H1975_Epitope_Rep1 1032.54916177872 1032.5485749679299 75.564 1 0.07038435682518589 0.003708347784328896 0.018250972600785988 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 68303 14484 LTEIMSMGY True H1975_Epitope_Rep1 1043.46675467771 1043.4661749679299 60.913 1 0.07037568289149289 0.003708347784328896 0.018254401062148505 ['nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 33452 14576 GLAPPQHLIRV True PC9_epitope_Rep1 1199.71387611839 1199.71222490379 60.89 3 0.07036715446499478 0.003708347784328896 0.018257772591195345 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant'] 31449 9345 GEALPHVVP True H1975_Epitope_Rep2 917.49706663621 917.49596993586 40.907 2 0.07036341560330846 0.003708347784328896 0.018259250850963287 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 120780 13867 VELDNMPLR True PC9_epitope_Rep4 1085.5539298893298 1085.55282993586 61.241 2 0.07035721001189538 0.003708347784328896 0.018261704643233626 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 90665 7940 REQEELLAP True H1975_Epitope_Rep2 1083.5560380643099 1083.5549499358601 35.489 2 0.07035290124894253 0.003708347784328896 0.018263408577964855 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP'] 104406 17885 SQLDSPKALYL True PC9_epitope_Rep5 1233.66050313285 1233.6594099358601 73.812 2 0.07034768875640211 0.003708347784328896 0.01826547009636759 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 103424 7064 SPPPPPPPP True PC9_epitope_Rep6 881.4647038787699 881.46360993586 36.196 2 0.07033822252341258 0.003708347784328896 0.018269214501301305 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 74728 8543 NHANGLTL True PC9_epitope_Rep1 838.4297153523801 838.42860993586 37.698 2 0.07033713885008429 0.003708347784328896 0.0182696431977565 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 77306 10767 NSDPGLAVGY True H1975_Epitope_Rep2 991.46107505031 991.46052496793 46.445 1 0.0703368612696285 0.003708347784328896 0.018269753008874557 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 40103 11381 HPWETVTTAA True PC9_epitope_Rep2 1111.52982331647 1111.5287299358602 49.099 2 0.07033541533716234 0.003708347784328896 0.01827032503114164 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 6391 4659 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 25.247 2 0.07033350623042166 0.003708347784328896 0.01827108031417694 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 44109 4564 IINSSITTK True NCI_RA007_Epitope_Rep5 975.5600608155901 975.55896993586 24.215 2 0.07033326767738621 0.003708347784328896 0.018271174692837063 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 20910 18152 EQLSQLTGV True PC9_epitope_Rep5 973.5080252427299 973.50692993586 74.83 2 0.07032927694896375 0.003708347784328896 0.018272753610308244 ['ENSG00000152684|ENST00000274311|PELO'] 8700 6941 AVAPAGILK True NCI_RA007_Epitope_Rep3 838.5276384885 838.52654993586 34.409 2 0.07032333572717253 0.003708347784328896 0.01827510446735711 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3', 'ENST00000593331.1_1_19:8399202-8399642:-|nuORF'] 78069 23180 NVVEALIAL True PC9_epitope_Rep5 940.5593325395998 940.55822993586 94.143 2 0.07032148153355416 0.003708347784328896 0.01827583820270881 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 90211 3728 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 19.408 2 0.07030078670693846 0.003708347784328896 0.01828402934050236 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 33169 17135 GIVGGLSTV True PC9_epitope_Rep4 801.4596184983301 801.4590749679301 73.915 1 0.07029759093761326 0.003708347784328896 0.018285294548030465 ['ENSG00000165678|ENST00000372134|GHITM'] 35896 4183 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 22.619 2 0.07029616001417546 0.003708347784328896 0.018285861077966002 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 48532 18596 KALDGFVMV True PC9_epitope_Rep4 978.5208388558999 978.51974993586 79.606 2 0.07029315044982806 0.003708347784328896 0.018287052674994357 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 96494 14040 SADDTYLQL True NCI_RA007_Epitope_Rep5 1024.47130538084 1024.47020993586 60.696 2 0.0702738821532153 0.003708347784328896 0.01829468340330828 ['nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'PLEKHA7|p.F829Sfs*28|1|0.08|ENSG00000166689|chr11:16794937-16794944|TTCTGAAG/-|frameshift_variant'] 107335 20718 SVLGAITSV True PC9_epitope_Rep5 845.48583324617 845.48528496793 84.749 1 0.07026541715408663 0.003708347784328896 0.018298036686198678 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 104967 9190 SRDGM[Oxidation]NIVL True PC9_epitope_Rep4 1019.5069800773499 1019.50588993586 42.944 2 0.0702552581519951 0.003708347784328896 0.018302061773610177 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 115846 10548 TSDVGGYYY True H1975_Epitope_Rep2 1023.4185415319901 1023.41744993586 45.593 2 0.07024496730288037 0.003708347784328896 0.01830613993497269 ['ENSG00000131711|ENST00000296755|MAP1B'] 140262 17275 YRAPELML True PC9_epitope_Rep2 991.5160878286299 991.51498993586 71.706 2 0.07024452058831368 0.003708347784328896 0.018306316982555308 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 27859 18744 FQDPSVTQL True PC9_epitope_Rep3 1033.50802524273 1033.5069299358602 77.321 2 0.07023964135327425 0.003708347784328896 0.0183082508859957 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 70349 19185 LVSPASFENV True PC9_epitope_Rep4 1061.5393253710101 1061.53822993586 81.893 2 0.07023743815414622 0.003708347784328896 0.018309124194310637 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 53226 6654 KQFEKQVEL True PC9_epitope_Rep4 1147.6237237013097 1147.62208490379 32.766 3 0.07022473913723921 0.003708347784328896 0.018314158606226517 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 108569 8199 SYNPITHQL True NCI_RA007_Epitope_Rep3 1071.5349086969102 1071.53380993586 39.382 2 0.07021993236651289 0.003708347784328896 0.01831606454160492 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 35157 19574 GQWSQGLISA True PC9_epitope_Rep5 1045.5192586327698 1045.5181699358602 80.343 2 0.0702192537759262 0.003708347784328896 0.018316333624719582 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 11747 11209 DHATTALL True PC9_epitope_Rep1 840.43413202648 840.43302993586 47.997 2 0.07021275465688155 0.003708347784328896 0.018318910920822842 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 12067 16532 DHTLGNII True PC9_epitope_Rep5 881.46068112749 881.45958993586 68.592 2 0.07020243982532302 0.003708347784328896 0.018323002067722576 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 1209 7512 AEDDLNTVA True H1975_Epitope_Rep2 946.42435518842 946.4238049679301 33.845 1 0.07020225338372135 0.003708347784328896 0.018323076023382602 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 140351 5846 YRDPTTVTT True PC9_epitope_Rep4 1052.51383889916 1052.51274993586 29.357 2 0.07020096824028359 0.003708347784328896 0.018323585807843684 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 35890 4042 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 22.363 2 0.0701981692671201 0.003708347784328896 0.01832469613633075 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 85126 4638 QELPSHGV True H1975_Epitope_Rep2 865.4293809992099 865.42828993586 22.94 2 0.07019196786022164 0.003708347784328896 0.018327156402578836 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF', 'ANAPC5|p.L751F|1|0.16|ENSG00000089053|chr12:121308495-121308495|C/G|missense_variant'] 87774 19428 QRDFNMIDL True PC9_epitope_Rep2 1150.54409348162 1150.54298993586 80.107 2 0.07018931515033865 0.003708347784328896 0.018328208897798303 ['ENSG00000068654|ENST00000263857|POLR1A'] 58572 11824 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.5913299358601 50.476 2 0.07017722108157678 0.003708347784328896 0.018333008076548928 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 108915 9103 TADGAHFEL True NCI_RA007_Epitope_Rep3 959.43486030247 959.43376993586 42.892 2 0.07017460258536337 0.003708347784328896 0.01833404730351377 ['ENSG00000085872|ENST00000546361|CHERP', 'ENST00000546538.1_1_19:16643407-16652813:-|nuORF'] 25677 15120 FEQFPPPEI True H1975_Epitope_Rep2 1102.5335117145798 1102.5324099358602 63.313 2 0.07017371098821691 0.003708347784328896 0.018334401172406308 ['ENSG00000150990|ENST00000308736|DHX37'] 11890 6329 DHINGRVL True PC9_epitope_Rep5 922.49846361854 922.49736993586 29.32 2 0.07017118039276654 0.003708347784328896 0.01833540558307758 ['ENSG00000196878|ENST00000356082|LAMB3'] 65780 8088 LSDGVAVLK True NCI_RA007_Epitope_Rep2 900.5280324113199 900.52692993586 36.092 2 0.07016234442987793 0.003708347784328896 0.018338913036360142 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 48701 14313 KAYTSQFVSL True PC9_epitope_Rep6 1142.5971746003 1142.5960699358602 66.952 2 0.0701611473208625 0.003708347784328896 0.018339388278925218 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT1|p.V504L|1|0.07|ENSG00000198380|chr2:69329771-69329771|C/A|missense_variant'] 40364 17521 HQSGFFSAL True PC9_epitope_Rep4 992.4715801643599 992.47048993586 75.399 2 0.07016094124711598 0.003708347784328896 0.018339470089679493 ['ENSG00000120029|ENST00000370033|ARMH3'] 39091 5862 HHTTQQTFL True PC9_epitope_Rep2 1111.54105670651 1111.53994993586 27.945 2 0.07015968295299378 0.003708347784328896 0.018339969636574745 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 141305 5409 YTDRALRASY True H1975_Epitope_Rep3 1214.6043852390599 1214.6027249037902 25.868 3 0.0701579751079629 0.003708347784328896 0.018340647676787693 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF', 'ENSG00000100056|ENST00000252137|ESS2', 'ENST00000434568.5_1_22:19121711-19126708:-|nuORF'] 39732 13256 HLVDEPQNLIK True PC9_epitope_Rep3 1304.7088503076 1304.7077499358602 56.022 2 0.07015606076695648 0.003708347784328896 0.0183414077265726 ['CON__P02769'] 104817 19121 SRADTILCL True PC9_epitope_Rep5 990.5168161046199 990.51570993586 78.582 2 0.07015274024708879 0.003708347784328896 0.018342726139883185 ['ENSG00000187531|ENST00000328666|SIRT7', 'ENST00000572976.5_1_17:79870294-79872532:-|nuORF', 'nc|ENSG00000187531|Q9NRC8-3|SIRT7', 'ENST00000574992.5_1_17:79871648-79872373:-|nuORF', 'ENST00000576156.1_1_17:79871830-79872373:-|nuORF'] 114860 14679 TQPGTGWVQF True NCI_RA007_Epitope_Rep3 1119.5349086969097 1119.53380993586 65.122 2 0.07014696427944568 0.003708347784328896 0.018345019698229655 ['nc|ENSG00000157191|Q9NVZ3-4|NECAP2', 'ENSG00000157191|ENST00000337132|NECAP2'] 39878 8146 HPDYNNEL True PC9_epitope_Rep1 1000.4250238947601 1000.42392993586 36.164 2 0.07014571851064791 0.003708347784328896 0.018345514410879157 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 62743 17110 LLLPGELAK True PC9_epitope_Rep3 952.5957180483199 952.59462993586 70.966 2 0.07013691277166784 0.003708347784328896 0.0183490116479254 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 64243 11983 LPHDLAVQA True PC9_epitope_Rep5 962.5185303567799 962.51742993586 51.089 2 0.0701333478316532 0.003708347784328896 0.018350427654484955 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1', 'ENST00000487671.1_1_22:31840579-31845472:-|nuORF'] 117687 21217 TVTTVILEV True PC9_epitope_Rep1 973.5695628701299 973.56846993586 86.435 2 0.07012808837122655 0.003708347784328896 0.018352516914970477 ['ENSG00000119203|ENST00000238112|CPSF3'] 11830 14999 DHGGVIVAI True PC9_epitope_Rep4 879.48141657207 879.48030993586 65.633 2 0.07012457127920568 0.003708347784328896 0.018353914162278308 ['SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2'] 55093 8171 LAAARLAAA True PC9_epitope_Rep1 826.5024863698198 826.50138993586 36.262 2 0.07011684486001798 0.003708347784328896 0.018356984009001123 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 115143 9626 TRDEVTGEAAL True PC9_epitope_Rep1 1160.567331024 1160.56622993586 41.881 2 0.07010962708099673 0.003708347784328896 0.0183598521927233 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-4|ASPSCR1'] 61894 13811 LLDDTGLAY True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 58.271 1 0.07009920275437956 0.003708347784328896 0.018363995318151895 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9', 'ENST00000473626.1_1_2:219457053-219457431:+|nuORF'] 6758 17092 AQDEHLITF True PC9_epitope_Rep5 1072.5189242796 1072.51837496793 70.766 1 0.07009509441242077 0.003708347784328896 0.018365628407039102 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 48850 8035 KEAEELLPA True H1975_Epitope_Rep2 998.5284263341398 998.5273299358599 35.856 2 0.0700944691241806 0.003708347784328896 0.018365876974384597 ['ENSG00000135476|ENST00000257934|ESPL1'] 2722 11555 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.47964993586 49.432 2 0.07008476784426632 0.003708347784328896 0.018369733868660337 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 35038 12830 GQVGGEINV True PC9_epitope_Rep5 871.43994568291 871.43884993586 54.361 2 0.07008181552820333 0.003708347784328896 0.018370907756343022 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 17816 19393 EHSTVITFL True PC9_epitope_Rep2 1045.54441075145 1045.5433099358602 79.973 2 0.07007742201525619 0.003708347784328896 0.018372654815193498 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 17137 9509 EGPEVDVNLPK True H1975_Epitope_Rep3 1195.6084675599898 1195.60736993586 41.581 2 0.07007647446600543 0.003708347784328896 0.01837303162364107 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 76525 18319 NQINGSFAL True PC9_epitope_Rep4 962.48214484806 962.48104993586 78.533 2 0.07006485403649003 0.003708347784328896 0.018377653258642337 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 1107 10905 AEAPADPFA True H1975_Epitope_Rep2 887.40249754503 887.40194496793 46.976 1 0.07006289939941564 0.003708347784328896 0.018378430755413025 ['nc|ENSG00000177674|Q6RW13-2|AGTRAP', 'ENSG00000177674|ENST00000314340|AGTRAP', 'ENST00000471765.1_1_1:11807599-11814482:+|nuORF', 'ENST00000510878.1_1_1:11796255-11810246:+|nuORF', 'ENST00000491346.5_1_1:11806200-11810246:+|nuORF', 'ENST00000476512.5_1_1:11806200-11810246:+|nuORF'] 35531 12172 GSSGGVIYL True H1975_Epitope_Rep1 851.43888305375 851.43833496793 51.838 1 0.07004501609816198 0.003708347784328896 0.018385545615658784 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 40487 11623 HRDLPIKL True PC9_epitope_Rep5 990.5974493838199 990.59634993586 49.703 2 0.07002675867576334 0.003708347784328896 0.018392811947191497 ['ENSG00000136628|ENST00000366923|EPRS1'] 79265 8720 PAPPPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 38.494 2 0.07002516603466735 0.003708347784328896 0.018393445933566427 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 97703 10386 SEIDQVVPA True H1975_Epitope_Rep2 956.4814761417199 956.48036993586 44.961 2 0.07002268327984063 0.003708347784328896 0.0183944342899047 ['ENSG00000162607|ENST00000339950|USP1'] 84286 21252 PYPQYFTQL True PC9_epitope_Rep3 1155.5600608155898 1155.5589699358602 87.039 2 0.07001581700405983 0.003708347784328896 0.01839716793158109 ['ENSG00000103160|ENST00000219439|HSDL1'] 35763 17262 GTIGLIHAI True PC9_epitope_Rep2 893.53345214493 893.5329049679301 71.658 1 0.07001200169102166 0.003708347784328896 0.018398687068569057 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 49297 3023 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 15.949 2 0.07000227488712274 0.003708347784328896 0.018402560499077444 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 1985 12057 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47511496793 51.539 1 0.07000114374235242 0.003708347784328896 0.01840301099512187 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 6315 4340 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 23.127 2 0.06999614458247733 0.003708347784328896 0.01840500211062702 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 11576 21680 DGAGFLINLID True H1975_Epitope_Rep1 1146.5920892198599 1146.59098993586 90.084 2 0.0699890203982856 0.003708347784328896 0.018407839946322696 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 133361 20865 VVVGDLVEV True PC9_epitope_Rep5 927.5276980581499 927.5271449679301 85.309 1 0.0699850028794466 0.003708347784328896 0.018409440456508615 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 40151 13696 HQDLSTPVL True PC9_epitope_Rep3 1008.52400966004 1008.52290993586 57.759 2 0.06998442764561567 0.003708347784328896 0.018409669630272015 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 11824 14808 DHFRLGSVL True PC9_epitope_Rep6 1042.55597849466 1042.55488993586 68.93 2 0.06996947485827601 0.003708347784328896 0.018415627762060793 ['ENSG00000158435|ENST00000289382|CNOT11'] 1167 7119 AEAPPSVAP True H1975_Epitope_Rep2 837.4232329896099 837.42212993586 32.315 2 0.069966746705028 0.003708347784328896 0.01841671502236567 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 27440 24397 FLYPFPLAL True PC9_epitope_Rep5 1079.60555445603 1079.6044499358602 98.878 2 0.0699624558211129 0.003708347784328896 0.01841842520319074 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 110106 3950 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 20.256 2 0.06995640750647818 0.003708347784328896 0.018420836077476344 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 107332 20714 SVLGAITSV True PC9_epitope_Rep3 845.48583324617 845.48528496793 84.95 1 0.06995044032901948 0.003708347784328896 0.01842321489619735 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 96726 20212 SALPFITYL True H1975_Epitope_Rep3 1023.5640835668698 1023.5635749679301 84.539 1 0.06994649109490536 0.003708347784328896 0.018424789416835768 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 31308 18728 GDLENAFLNL True H1975_Epitope_Rep1 1104.54513902744 1104.5440499358601 78.095 2 0.06994039228853688 0.003708347784328896 0.018427221195132033 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 27234 20028 FLPDPSALQNL True PC9_epitope_Rep6 1213.6342883850098 1213.6331899358602 89.704 2 0.06993932521604684 0.003708347784328896 0.018427646699662986 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 86127 20406 QHYPYFLIV True PC9_epitope_Rep4 1178.61243074162 1178.61132993586 86.639 2 0.06992503446770053 0.003708347784328896 0.01843334613670024 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 134056 7852 VYKDHQTITI True PC9_epitope_Rep2 1216.6451874218799 1216.6435349037902 35.572 3 0.06990735840952185 0.003708347784328896 0.018440397957811317 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 90339 8679 REFESAIVEA True NCI_RA007_Epitope_Rep3 1149.56660274801 1149.56550993586 41.219 2 0.06989742585446186 0.003708347784328896 0.018444361621338362 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 8730 19815 AVATDFFTV True PC9_epitope_Rep6 969.48074786573 969.47964993586 88.878 2 0.06989579525391679 0.003708347784328896 0.018445012400461574 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 121201 8577 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 37.945 1 0.06986742183788061 0.003708347784328896 0.018456339741987085 ['ENSG00000052749|ENST00000370992|RRP12'] 7644 20150 ASIDILHSI True PC9_epitope_Rep1 967.5338460677501 967.53274993586 82.336 2 0.06986142526725171 0.003708347784328896 0.01845873453846079 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 141801 19723 YVDDFGVSV True PC9_epitope_Rep4 999.4549270407099 999.4543749679301 83.987 1 0.0698556469751058 0.003708347784328896 0.018461042434792383 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 22374 15812 ETEEDKFLLLY True H1975_Epitope_Rep1 1398.6918628307799 1398.69127496793 66.127 1 0.06985413462035021 0.003708347784328896 0.018461646525484304 ['DDX56|p.T315Lfs*35|1|0.49|ENSG00000136271|chr7:44570825-44570825|T/-|frameshift_variant', 'ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 107885 12942 SVVPDVRSV True PC9_epitope_Rep1 956.52909504048 956.52798993586 54.653 2 0.06985146102140909 0.003708347784328896 0.018462714504967663 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 34800 10356 GQHPNIITL True NCI_RA007_Epitope_Rep2 991.5450794577899 991.5439899358599 44.874 2 0.0698444390497359 0.003708347784328896 0.01846551973082994 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 97422 11210 SEEDPVTSIP True H1975_Epitope_Rep2 1072.49243474824 1072.4913299358602 48.16 2 0.06983181677938043 0.003708347784328896 0.01847056322543112 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 32060 7534 GESAEVLSA True H1975_Epitope_Rep2 861.40797684829 861.4074249679301 33.931 1 0.06982133268782982 0.003708347784328896 0.018474753333660998 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 78333 19933 NYISGIQTI True PC9_epitope_Rep5 1007.52876068731 1007.52766993586 81.727 2 0.06981819922118251 0.003708347784328896 0.018476005836310826 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 114494 17410 TPYNYPVPV True PC9_epitope_Rep6 1048.5229470308798 1048.52184993586 79.582 2 0.06981223233487556 0.003708347784328896 0.01847839112452498 ['ENSG00000170906|ENST00000485876|NDUFA3'] 1256 14913 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.44834993586 62.516 2 0.06980745507893245 0.003708347784328896 0.018480301058126165 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 98350 6374 SEYIHAQVA True NCI_RA007_Epitope_Rep4 1016.4927095317598 1016.49160993586 31.121 2 0.06980264060212744 0.003708347784328896 0.018482226057150435 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 52787 4801 KNLQTVNVDEN True NCI_RA007_Epitope_Rep3 1272.6309939097198 1272.62988993586 25.852 2 0.06979946849046159 0.003708347784328896 0.018483494481486448 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 2653 13853 AESLQLVTV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 58.431 2 0.06978065096452175 0.003708347784328896 0.018491020653110944 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000461999.1_1_11:118967710-118968007:-|nuORF'] 63990 3529 LNVTEQEKIDK True NCI_RA007_Epitope_Rep1 1315.69834519355 1315.69669490379 17.65 3 0.06977678091859409 0.003708347784328896 0.018492568850148536 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 24796 8819 FATHAAALSVR True PC9_epitope_Rep3 1142.6196413803798 1142.61799490379 38.871 3 0.06977085968532312 0.003708347784328896 0.018494937848735044 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 20047 14040 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 59.157 2 0.06977067836466301 0.003708347784328896 0.01849501039689829 ['ENSG00000182195|ENST00000370526|LDOC1'] 104103 19103 SQDYPTLAF True PC9_epitope_Rep6 1040.48147614172 1040.48097496793 86.129 1 0.06975898321433015 0.003708347784328896 0.01849969029622441 ['ENSG00000134697|ENST00000373062|GNL2'] 24401 20057 FAAPLILL True H1975_Epitope_Rep3 856.54222592348 856.54167496793 83.941 1 0.0697572386719162 0.003708347784328896 0.018500388481349037 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 2985 16028 AFGYYGPLR True PC9_epitope_Rep2 1042.5236157372199 1042.5225099358602 66.906 2 0.06975018280356608 0.003708347784328896 0.01850321256619763 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 134509 15060 VYQHLFTRI True PC9_epitope_Rep5 1175.6451278522297 1175.64402993586 62.934 2 0.06975006255548881 0.003708347784328896 0.018503260698492823 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 9447 14550 AVVESMVTA True PC9_epitope_Rep5 905.4528188657299 905.45172993586 60.966 2 0.06974332274461632 0.003708347784328896 0.01850595866110737 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 65842 16895 LSDLGLLSY True H1975_Epitope_Rep1 979.52261267771 979.5220649679301 70.398 1 0.0697425148913056 0.003708347784328896 0.018506282071147444 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 77693 22961 NTIPLFVQL True PC9_epitope_Rep3 1043.60153170475 1043.60097496793 93.584 1 0.06974154670856839 0.003708347784328896 0.018506669673170707 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 87157 18699 QPFGDHIISV True PC9_epitope_Rep3 1111.56620882519 1111.5651099358602 77.148 2 0.06974112133924211 0.003708347784328896 0.018506839967787896 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 14111 4727 DSAPSPPPP True H1975_Epitope_Rep3 863.40249754503 863.40194496793 23.309 1 0.06973664434324998 0.0037333333333333333 0.018508632400010466 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 25678 14908 FEQFPPPEI True H1975_Epitope_Rep2 1102.5335117145798 1102.5324099358602 62.496 2 0.06973006953808876 0.0037333333333333333 0.01851126501233435 ['ENSG00000150990|ENST00000308736|DHX37'] 97466 11767 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 50.337 1 0.06972734451790794 0.0037333333333333333 0.0185123562368723 ['ENSG00000135900|ENST00000258383|MRPL44'] 106777 9624 SVADTVARV True PC9_epitope_Rep2 916.4977949121999 916.49668993586 42.36 2 0.06971372308551824 0.0037333333333333333 0.018517811781994416 ['ENSG00000145632|ENST00000274289|PLK2'] 141803 20637 YVDDFGVSV True PC9_epitope_Rep5 999.4549270407099 999.4543749679301 84.433 1 0.06970956677327175 0.0037333333333333333 0.018519476730180652 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 131574 20953 VTLGPVPEI True PC9_epitope_Rep3 923.53278343859 923.5322349679301 85.873 1 0.06970492469570587 0.0037333333333333333 0.01852133643127686 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 32835 15332 GHMGEGFAL True PC9_epitope_Rep5 917.4065373796499 917.40544993586 63.985 2 0.06969223694589655 0.0037333333333333333 0.018526420256333095 ['ENSG00000105447|ENST00000253237|GRWD1'] 21423 16929 ERIPDVAAL True PC9_epitope_Rep5 982.5447451046199 982.54364993586 70.133 2 0.06968681485989288 0.0037333333333333333 0.018528593212734135 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 11961 10598 DHNGMLSV True PC9_epitope_Rep4 871.38580193507 871.38470993586 48.508 2 0.0696866193733893 0.0037333333333333333 0.018528671560348427 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 116671 8712 TVAVPLVGK True NCI_RA007_Epitope_Rep4 882.5538532363399 882.55274993586 40.302 2 0.0696797228836733 0.0037333333333333333 0.018531435750264915 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 7963 13053 ATDDITELY True H1975_Epitope_Rep1 1039.47097102767 1039.47037496793 55.294 1 0.06967485675607246 0.0037333333333333333 0.01853338637775839 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 58490 7517 LEQDHFQVA True H1975_Epitope_Rep3 1085.5141732523298 1085.5130699358601 33.894 2 0.06966483090145437 0.0037333333333333333 0.018537405922785792 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 138462 10278 YHNSVECL True PC9_epitope_Rep5 963.41201668291 963.41090993586 44.521 2 0.06965707136484885 0.0037333333333333333 0.018540517413335834 ['ENST00000414369.2_1_2:53984069-54014663:-|nuORF', 'ENSG00000115239|ENST00000263634|ASB3', 'nc|ENSG00000115239|Q9Y575-3|ASB3'] 36141 18503 GVAPGFQVV True PC9_epitope_Rep4 872.4756029156399 872.4745099358599 79.244 2 0.06965551230327978 0.0037333333333333333 0.01854114263845282 ['ENSG00000165724|ENST00000298585|ZMYND19'] 93390 8653 RQAPIPAEL True NCI_RA007_Epitope_Rep4 993.5607295219298 993.55962993586 40.067 2 0.06965354949897246 0.0037333333333333333 0.018541929802844893 ['ENSG00000169583|ENST00000494426|CLIC3'] 21258 20296 ERDRLILFL True PC9_epitope_Rep2 1173.6869926642098 1173.6858899358601 83.49 2 0.0696427607292902 0.0037333333333333333 0.018546257089961587 ['ENSG00000138246|ENST00000260818|DNAJC13'] 142371 13886 YYEKLHTYF True PC9_epitope_Rep2 1262.5971746003 1262.59552490379 58.693 3 0.06963817580895822 0.0037333333333333333 0.01854809634652559 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 5821 17256 APELQGVEV True PC9_epitope_Rep1 940.4865615221598 940.48601496793 71.193 1 0.06962548980536525 0.0037547933532168726 0.018553186259029873 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 27257 22865 FLPSYIIDV True PC9_epitope_Rep1 1065.57464825057 1065.57354993586 92.743 2 0.06961975600281847 0.0037547933532168726 0.018555487214260966 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 120779 15105 VELDNMPLR True PC9_epitope_Rep3 1085.5539298893298 1085.55282993586 63.24 2 0.06961645146729274 0.0037547933532168726 0.018556813432785965 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 135158 11951 WELVTREVP True H1975_Epitope_Rep1 1127.59750895347 1127.59640993586 50.973 2 0.06961086542555503 0.0037547933532168726 0.018559055493808683 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 140266 15726 YRAPELML True PC9_epitope_Rep6 991.5160878286299 991.51498993586 72.713 2 0.06961042161062082 0.0037547933532168726 0.018559233637864242 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 47852 8567 IYHNPTANSF True PC9_epitope_Rep6 1162.54072235334 1162.5396299358601 42.728 2 0.06960963367780515 0.0037547933532168726 0.01855954991220368 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 92071 5922 RKVKSIVTL True NCI_RA007_Epitope_Rep4 1042.68626438822 1042.6851699358601 29.4 2 0.06960424026128104 0.0037547933532168726 0.018561714950380098 ['ENSG00000121769|ENST00000373713|FABP3'] 104814 6834 SRAAEKLYL True PC9_epitope_Rep6 1049.58694426977 1049.58584993586 35.15 2 0.069576939641752 0.0037547933532168726 0.018572677611708194 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 106270 7841 STESSVAVY True H1975_Epitope_Rep3 941.43419159613 941.43308993586 35.137 2 0.06956793982274177 0.0037547933532168726 0.018576292832312668 ['ENST00000411676.6_1_18:55274615-55283204:-|nuORF', 'ENSG00000134440|ENST00000256854|NARS1'] 13975 6673 DRDPASGTAL True PC9_epitope_Rep4 1001.47778774361 1001.47668993586 32.843 2 0.06956632192353605 0.0037547933532168726 0.018576942810176668 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 22329 10752 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.49727496793 46.436 1 0.06956149681407535 0.0037547933532168726 0.01857888138351169 ['ENSG00000150787|ENST00000280362|PTS'] 40464 15256 HRDFISVTL True PC9_epitope_Rep4 1086.5821932425 1086.58108993586 66.612 2 0.06955511397570263 0.0037547933532168726 0.018581446089284692 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000545096.1_1_9:139981559-139982655:+|nuORF'] 14425 12669 DTDSINLY True H1975_Epitope_Rep3 939.4185415319901 939.4179949679301 53.941 1 0.06955127766674994 0.0037547933532168726 0.018582987724502002 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 99118 14009 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 58.724 2 0.06954793160741744 0.0037547933532168726 0.018584332447561695 ['ENSG00000132646|ENST00000379143|PCNA'] 1446 12831 AEEGGFAVVC True H1975_Epitope_Rep2 980.4273323938799 980.4267849679301 54.463 1 0.06954033683545735 0.0037547933532168726 0.018587384988023963 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 129634 18696 VRPGILVL True PC9_epitope_Rep5 865.5749230340899 865.57382993586 76.931 2 0.06953645724556927 0.0037547933532168726 0.018588944476966716 ['nc|ENSG00000167118|Q9BTM9-2|URM1', 'ENST00000470840.5_1_9:131140285-131152010:+|nuORF', 'ENSG00000167118|ENST00000372853|URM1'] 103787 15156 SPVVPQISA True PC9_epitope_Rep4 896.4967322830399 896.49562993586 66.225 2 0.06953485935964494 0.0037547933532168726 0.01858958681852372 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 4776 14953 ALDSTNVEL True PC9_epitope_Rep6 960.47639076128 960.47528993586 69.525 2 0.06951768214808436 0.0037547933532168726 0.01859649326074712 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 97 15056 AAAPVVPAV True PC9_epitope_Rep5 793.4697892592098 793.46868993586 62.919 2 0.06951554171120858 0.0037547933532168726 0.01859735403240834 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 40987 11362 HTDVGLLEY True H1975_Epitope_Rep2 1045.50802524273 1045.50747496793 48.753 1 0.0695155056402102 0.0037547933532168726 0.018597368538591032 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 104375 20841 SQIYPVVCV True PC9_epitope_Rep3 1006.5157534754599 1006.5151749679301 85.436 1 0.06951248920497805 0.0037547933532168726 0.018598581654307014 ['ENSG00000144224|ENST00000272638|UBXN4'] 2147 4624 AELPSRTP True H1975_Epitope_Rep3 869.46068112749 869.45958993586 22.908 2 0.06951027787852383 0.0037547933532168726 0.018599471026954046 ['ENSG00000198113|ENST00000357503|TOR4A'] 9516 5770 AVVVVDDR True PC9_epitope_Rep2 871.4763311916298 871.4752299358599 27.587 2 0.06950595769737543 0.0037547933532168726 0.018601208672549288 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 103844 7997 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 36.122 2 0.069492659677767 0.0037547933532168726 0.018606558289146372 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 99748 21601 SIIGRLLEV True PC9_epitope_Rep5 998.6124307416198 998.6118849679301 88.128 1 0.06949247425236256 0.0037547933532168726 0.01860663289337127 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 104644 21257 SQTDFSQLL True PC9_epitope_Rep1 1037.50293986229 1037.50184993586 86.588 2 0.06948994161810201 0.0037547933532168726 0.01860765190339921 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 105255 11507 SRKYVIISL True NCI_RA007_Epitope_Rep2 1077.65462990677 1077.6535299358602 49.352 2 0.0694897473700557 0.0037547933532168726 0.018607730061585108 ['ENST00000597244.1_1_19:16688496-16688601:-|nuORF'] 55137 18044 LAAEFLKQV True PC9_epitope_Rep3 1017.5858816406097 1017.58478993586 74.606 2 0.06948756895427073 0.0037547933532168726 0.01860860659581465 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 25502 11873 FEGGVVIAA True H1975_Epitope_Rep3 861.4596184983299 861.4590749679301 50.819 1 0.06947740140209169 0.0037547933532168726 0.018612698242063325 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 141664 22343 YTTDFIYQL True PC9_epitope_Rep1 1162.55464108198 1162.55354993586 90.757 2 0.06946623760382524 0.0037547933532168726 0.018617191757039426 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 31916 12450 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43606993586 52.979 2 0.06945137742159929 0.0037547933532168726 0.01862317465020406 ['ENSG00000100726|ENST00000262319|TELO2'] 128714 12963 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 54.871 2 0.06944695839149491 0.0037547933532168726 0.01862495414903461 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 102959 9656 SPFAEGTSA True PC9_epitope_Rep1 865.38176210045 865.3806699358599 41.998 2 0.06943565429888753 0.0037547933532168726 0.01862950690802774 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 115412 18039 TRLPEFSEL True PC9_epitope_Rep4 1090.56587447202 1090.56537496793 77.453 1 0.06942829996433794 0.0037547933532168726 0.018632469441553046 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 1109 4830 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 23.669 1 0.06942818681695558 0.0037547933532168726 0.018632515023911778 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 73287 16457 MTDEWFSEY True H1975_Epitope_Rep2 1206.45394106454 1206.45337496793 68.52 1 0.0694276739491177 0.0037547933532168726 0.018632721638253698 ['ENST00000578795.1_1_17:28576037-28576226:-|nuORF', 'ENSG00000108578|ENST00000261714|BLMH'] 11909 18386 DHLLSVSL True PC9_epitope_Rep4 882.4810822189 882.48053496793 78.787 1 0.06942705818542623 0.0037547933532168726 0.018632969708096792 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 1372 8178 AEEDIFNKP True H1975_Epitope_Rep3 1061.50293986229 1061.50184993586 36.436 2 0.06942562688824891 0.0037547933532168726 0.018633546339897063 ['ENSG00000174371|ENST00000366548|EXO1'] 96439 16085 SAAFPGASL True PC9_epitope_Rep6 819.41266830591 819.41156993586 74.203 2 0.06942494550483043 0.0037547933532168726 0.01863382085705845 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 103867 6619 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 34.174 2 0.06942259054985447 0.0037547933532168726 0.01863476965496517 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 73420 23528 MTVDDLLSL True PC9_epitope_Rep1 1005.5052483614099 1005.50414993586 95.289 2 0.06941722577082723 0.0037547933532168726 0.01863693126045005 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 104515 20677 SQNDGFFAV True PC9_epitope_Rep3 983.4348603024699 983.43376993586 84.808 2 0.06940957691067355 0.0037547933532168726 0.018640013580734104 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 140760 16772 YSDEFGNLDF True H1975_Epitope_Rep3 1205.4876837209702 1205.4871749679298 70.058 1 0.06940900546717642 0.0037547933532168726 0.01864024387864273 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 13941 19966 DRAIPLVL True PC9_epitope_Rep1 895.5491022090699 895.54800993586 81.624 2 0.06940886688007064 0.0037547933532168726 0.018640299731141025 ['ENSG00000103381|ENST00000381774|CPPED1'] 132220 15845 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 68.871 2 0.06940701233889442 0.0037547933532168726 0.018641047151467426 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 8284 18828 ATIGELAQV True PC9_epitope_Rep1 900.4916469025999 900.49054993586 77.208 2 0.06938843600129999 0.0037547933532168726 0.018648535346351646 ['ENSG00000198793|ENST00000361445|MTOR'] 28057 21432 FQSPPTPFL True PC9_epitope_Rep1 1032.5280324113198 1032.5269299358602 87.276 2 0.06938393738348782 0.0037547933532168726 0.018650349174856046 ['nc|ENSG00000175550|Q14919-2|DRAP1', 'ENSG00000175550|ENST00000312515|DRAP1', 'ENST00000530791.5_1_11:65687869-65688903:+|nuORF'] 140437 13401 YRGNVGVVL True PC9_epitope_Rep5 975.5501648382299 975.54906993586 56.564 2 0.06937952341202648 0.0037547933532168726 0.01865212903263242 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 73412 12475 MTQDKVFRL True PC9_epitope_Rep5 1136.60121443492 1136.59957490379 52.983 3 0.06937288558664545 0.0037547933532168726 0.018654805916533443 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant', 'PLXNB2|p.Y454S|1|0.25|ENSG00000196576|chr22:50288762-50288762|T/G|missense_variant'] 76437 15492 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 64.412 2 0.06936419782948522 0.0037547933532168726 0.018658310027518023 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 29700 20097 FVLPILQKL True PC9_epitope_Rep6 1069.68995278633 1069.6888499358602 89.979 2 0.06936013438962478 0.0037547933532168726 0.01865994917985434 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 97595 8012 SEEVGIAEA True H1975_Epitope_Rep3 903.41854153199 903.4179949679301 35.791 1 0.06935296726080306 0.0037547933532168726 0.018662840654553398 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 103528 13587 SPRPPLISV True PC9_epitope_Rep4 964.57056592964 964.56946993586 60.156 2 0.069345065263572 0.003771880893563896 0.01866602908105543 ['ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 35210 11034 GRAPGGLSL True PC9_epitope_Rep1 826.4661008611 826.4650099358599 47.33 2 0.06934435280714409 0.003771880893563896 0.01866631657930443 ['ENSG00000171223|ENST00000302754|JUNB'] 107235 9434 SVIVQPFSK True NCI_RA007_Epitope_Rep1 1003.57023157647 1003.56912993586 40.69 2 0.06933178265980462 0.003771880893563896 0.018671389696152386 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-3|ZNF280D', 'nc|ENSG00000285253|Q6N043-6|ZNF280D'] 89333 19132 QWPPDPPLHF True PC9_epitope_Rep6 1232.59784330664 1232.59674993586 86.242 2 0.06932487850831155 0.003771880893563896 0.018674176646676775 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 45714 16989 IRPENVIIY True PC9_epitope_Rep5 1115.6338944621898 1115.63278993586 70.367 2 0.0693187008725827 0.003771880893563896 0.018676670655412585 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 48149 18918 IYPPINVLPSL True NCI_RA007_Epitope_Rep4 1224.71181042972 1224.7107099358602 81.801 2 0.06931334603801921 0.003771880893563896 0.018678832735318125 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 9587 20723 AYAENIALL True PC9_epitope_Rep2 976.5229470308799 976.52184993586 85.148 2 0.06931309394619649 0.003771880893563896 0.018678934526171132 ['ENSG00000196455|ENST00000356763|PIK3R4'] 32313 6746 GFEAAVAAGAK True H1975_Epitope_Rep1 990.5134449763398 990.51234993586 30.989 2 0.06930308233901654 0.003771880893563896 0.018682977475538685 ['ENST00000479458.1_1_1:24140678-24143239:-|nuORF', 'ENST00000513148.1_1_1:24137168-24151905:-|nuORF', 'ENSG00000117305|ENST00000374490|HMGCL'] 9691 20608 AYGGAFYAF True PC9_epitope_Rep4 965.42831837005 965.4277649679301 87.422 1 0.0693002907299531 0.003771880893563896 0.018684104944556724 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 103886 17068 SQADVIPAV True PC9_epitope_Rep1 898.4759968384599 898.47488993586 70.477 2 0.06929983708456795 0.003771880893563896 0.018684288167808188 ['ENSG00000075643|ENST00000261326|MOCOS', 'MOCOS|p.G525V|1|0.23|ENSG00000075643|chr18:36215754-36215754|G/T|missense_variant'] 26977 14731 FLEETNCLY True H1975_Epitope_Rep2 1130.4954119536999 1130.4943099358602 61.824 2 0.06929793766882227 0.003771880893563896 0.018685055342602258 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A', 'CUL4A|p.L528Qfs*15|1|0.1|ENSG00000139842|chr13:113246006-113246009|ACTC/-|frameshift_variant'] 437 19948 AALPNVYEV True PC9_epitope_Rep3 974.5072969667399 974.5067449679301 81.973 1 0.06929726963065529 0.003771880893563896 0.01868532517040683 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 31478 13087 GEAPVPVLP True H1975_Epitope_Rep2 877.4909186266099 877.49037496793 55.462 1 0.06928045843635838 0.003771880893563896 0.018692116577792902 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 134160 11632 VYLPGSRQTL True PC9_epitope_Rep6 1132.62405805448 1132.62296993586 55.865 2 0.0692798496129922 0.003771880893563896 0.0186923625737988 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 99115 13924 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.4914349679301 58.394 1 0.06927052868545473 0.003771880893563896 0.01869612908210011 ['ENSG00000132646|ENST00000379143|PCNA'] 105839 5561 SSLNLRETN True NCI_RA007_Epitope_Rep2 1032.51998690876 1032.5188899358602 26.245 2 0.06926951441915558 0.003771880893563896 0.018696538980858043 ['ENSG00000026025|ENST00000544301|VIM'] 47828 20543 IYGYVAEQF True PC9_epitope_Rep1 1088.5178616504397 1088.51727496793 83.831 1 0.06926460768765287 0.003771880893563896 0.018698522071532223 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 33384 18283 GLAAGGIVAV True PC9_epitope_Rep4 826.4912529797799 826.49070496793 78.396 1 0.0692471588062552 0.003771880893563896 0.018705575735952898 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 108592 22930 SYPDLLPTF True PC9_epitope_Rep1 1051.52261267771 1051.52207496793 93.001 1 0.06922845225060441 0.003771880893563896 0.018713140541694116 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 24399 20310 FAAPLILL True H1975_Epitope_Rep2 856.54222592348 856.54167496793 84.165 1 0.06922375596209973 0.003771880893563896 0.018715040132991658 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 112186 19902 TKFGGIVVL True PC9_epitope_Rep1 932.5695033004798 932.56840993586 81.371 2 0.0692114626957402 0.003771880893563896 0.018720013452311404 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 17337 16773 EHASSLLEL True PC9_epitope_Rep2 997.5080252427299 997.50692993586 69.765 2 0.06920888743447548 0.003771880893563896 0.01872105544531103 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 40989 11236 HTDVGLLEY True H1975_Epitope_Rep3 1045.50802524273 1045.50747496793 48.321 1 0.06920849807026296 0.003771880893563896 0.01872121299312761 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF', 'NCOR2|p.K192*|1|0.1|ENSG00000196498|chr12:124472969-124472970|-/A|frameshift_variant', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion'] 28811 22952 FSVTELIQV True PC9_epitope_Rep5 1034.5648118428599 1034.56370993586 93.273 2 0.06918390913323631 0.003771880893563896 0.01873116485615204 ['NFIC|p.P272Hfs*36|1|0.58|ENSG00000141905|chr19:3434380-3434384|GCCCA/-|frameshift_variant', 'nc|ENSG00000141905|P08651-4|NFIC', 'nc|ENSG00000141905|P08651-5|NFIC', 'nc|ENSG00000141905|P08651-3|NFIC', 'nc|ENSG00000141905|P08651-6|NFIC', 'nc|ENSG00000141905|P08651-2|NFIC', 'ENSG00000141905|ENST00000443272|NFIC'] 68276 10863 LTEEALAESA True H1975_Epitope_Rep3 1032.4975201286798 1032.4969749679299 46.866 1 0.0691836037149541 0.003771880893563896 0.01873128849859238 ['ENSG00000047662|ENST00000265018|FAM184B'] 72872 7517 M[Oxidation]PQSGTGVSV True PC9_epitope_Rep2 977.44879649489 977.44768993586 34.281 2 0.06918281891067829 0.003771880893563896 0.0187316062142543 ['ENSG00000115233|ENST00000409682|PSMD14'] 9149 15538 AVLDLVHSA True PC9_epitope_Rep2 923.50763131991 923.50652993586 65.039 2 0.06917866925266586 0.003771880893563896 0.018733286220740383 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 38086 7146 HAVGPSTSL True PC9_epitope_Rep5 867.4450310633501 867.44392993586 32.456 2 0.06917576690896796 0.003771880893563896 0.018734461329487345 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 66047 11661 LSEGVTISY True H1975_Epitope_Rep3 967.4862271689901 967.4856749679301 49.989 1 0.06917051082875075 0.003771880893563896 0.01873658959871099 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 129093 13672 VQPSLFYHL True NCI_RA007_Epitope_Rep5 1102.58113061334 1102.58002993586 59.273 2 0.06916920002182089 0.003771880893563896 0.018737120399759107 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 91830 4429 RKKHLEDEL True NCI_RA007_Epitope_Rep2 1166.64077074778 1166.6391149037902 21.861 3 0.06914995214331578 0.003771880893563896 0.018744916277511004 ['ENSG00000117862|ENST00000371626|TXNDC12'] 77738 4840 NTNPNFVR True PC9_epitope_Rep4 960.4777281739599 960.47662993586 25.202 2 0.06914039414398278 0.003771880893563896 0.018748788622060964 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 58840 19913 LESSIAPIVIF True H1975_Epitope_Rep2 1187.6801759482698 1187.67906993586 82.581 2 0.06914037554165033 0.003771880893563896 0.018748796159362723 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 111092 5221 THDQAVQAL True PC9_epitope_Rep6 981.4879585044899 981.48686993586 27.852 2 0.06913531846393026 0.003771880893563896 0.018750845292263913 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2'] 55099 7472 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 34.113 2 0.06913174950424711 0.003771880893563896 0.018752291562751586 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 103982 9995 SQAPSTMQV True PC9_epitope_Rep5 947.4382314307501 947.43712993586 43.421 2 0.06912864478671636 0.003771880893563896 0.018753549789456377 ['ENSG00000112658|ENST00000265354|SRF'] 27511 21640 FMPPGLQEL True PC9_epitope_Rep5 1030.5157534754599 1030.51464993586 88.282 2 0.06912700940045918 0.003771880893563896 0.018754212582117367 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 129176 19637 VQSGLRILL True PC9_epitope_Rep1 997.6284151589299 997.62730993586 80.358 2 0.06912627800494799 0.003771880893563896 0.01875450901057521 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 19510 16184 ELPKHYFSF True PC9_epitope_Rep2 1166.5760452329 1166.57494993586 67.504 2 0.06912595586937409 0.003771880893563896 0.018754639570790314 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 35701 22573 GTFDIFYTA True PC9_epitope_Rep1 1033.4756624852898 1033.47507496793 91.634 1 0.06911904644797326 0.003771880893563896 0.01875744013278081 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 67922 10546 LTDAIDEY True H1975_Epitope_Rep3 938.4232925592601 938.42274496793 45.631 1 0.0691100542925071 0.003771880893563896 0.018761085457561423 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 29790 18145 FVPIKVEQI True PC9_epitope_Rep5 1071.63283183303 1071.6317299358602 74.804 2 0.06909941751216292 0.003771880893563896 0.018765398340536085 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 60061 12080 LGLGIDEDD True H1975_Epitope_Rep1 945.42910621569 945.42855496793 51.478 1 0.06909666612333225 0.003771880893563896 0.01876651409200888 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000530115.1_1_11:27910388-27910514:-|nuORF'] 1943 4464 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 22.285 2 0.06909573123352496 0.003771880893563896 0.018766893225279694 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 136914 14642 YAFSGVEEL True H1975_Epitope_Rep2 1013.4705771048499 1013.47007496793 61.48 1 0.06909093600199769 0.003771880893563896 0.01876883798470139 ['ENST00000503240.5_1_5:148743537-148748214:+|nuORF', 'ENSG00000145882|ENST00000274569|PCYOX1L'] 85792 6073 QHDPSAVAV True PC9_epitope_Rep3 922.4508447197799 922.44974993586 28.408 2 0.06908950833113493 0.003771880893563896 0.018769417028433155 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 43194 16867 IFIDPGYQTF True NCI_RA007_Epitope_Rep5 1199.58627556343 1199.5851699358602 71.632 2 0.06907790266718362 0.003771880893563896 0.018774124738808025 ['ENSG00000121741|ENST00000610343|ZMYM2'] 77304 10700 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.46052496793 46.117 1 0.06905712266423052 0.003771880893563896 0.01878255664334171 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 48548 10444 KALSDHHIYL True PC9_epitope_Rep3 1195.63495709135 1195.63330490379 45.109 3 0.06905358919124138 0.003771880893563896 0.01878399076896696 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 54409 14629 KYFLKPEVL True PC9_epitope_Rep2 1135.6641319613097 1135.66249490379 61.538 3 0.06905171585858196 0.003771880893563896 0.01878475113682644 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 1538 10350 AEEPVFAAA True H1975_Epitope_Rep1 903.4337976733099 903.43324496793 44.758 1 0.06904354736560148 0.003771880893563896 0.01878806698239271 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 40536 12427 HRFGGLVL True PC9_epitope_Rep6 897.5184707871299 897.51736993586 59.229 2 0.06903883382795195 0.003771880893563896 0.018789980599956034 ['ENSG00000007520|ENST00000007390|TSR3'] 103220 9190 SPKQILDPA True PC9_epitope_Rep3 967.5338460677499 967.53274993586 40.288 2 0.06903648815907065 0.003771880893563896 0.018790932969412453 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 71390 17736 LYSEVSHLL True PC9_epitope_Rep4 1059.56006081559 1059.5589699358602 76.244 2 0.0690342555562289 0.003771880893563896 0.018791839474114162 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 44146 4658 IISNASC[Carbamidomethyl]TTN True NCI_RA007_Epitope_Rep2 1079.4917238350201 1079.4906299358602 22.744 2 0.06902847957867934 0.003771880893563896 0.018794184884162703 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000515281.1_1_11:88141588-88141981:-|nuORF', 'ENST00000423411.2_1_6:135940529-135940997:-|nuORF'] 140579 10689 YRQKQVVIL True PC9_epitope_Rep5 1145.6920780446499 1145.69044490379 46.106 3 0.06902686253272686 0.003771880893563896 0.018794841554919086 ['ENSG00000143179|ENST00000367879|UCK2'] 722 10945 AAVGFPTHL True H1975_Epitope_Rep3 911.48650195251 911.48540993586 47.186 2 0.06901222358890598 0.003771880893563896 0.01880078728906624 ['ENSG00000177352|ENST00000321895|CCDC71'] 106103 9974 STDGKHWWEY True H1975_Epitope_Rep1 1307.5571006934701 1307.55544490379 43.302 3 0.06901010913391288 0.003771880893563896 0.018801646236855887 ['ENSG00000129315|ENST00000261900|CCNT1'] 70279 5682 LVRPPTEQA True PC9_epitope_Rep4 1009.55564414149 1009.55454993586 28.664 2 0.0690054878618714 0.003771880893563896 0.018803523646464686 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 28790 17617 FSTTVIQNV True PC9_epitope_Rep4 1007.5287606873098 1007.52766993586 75.786 2 0.06900032371149684 0.003771880893563896 0.018805621807283943 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.D78E|1|0.25|ENSG00000100554|chr14:67350616-67350616|G/C|missense_variant'] 90121 5156 RECTIEATA True NCI_RA007_Epitope_Rep1 992.4596951513198 992.45858993586 24.139 2 0.06899824354977326 0.003771880893563896 0.01880646702458115 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 35137 19054 GQWIAETGV True PC9_epitope_Rep3 959.4712458111899 959.47014993586 78.513 2 0.06897809423588754 0.003771880893563896 0.018814655967374604 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 77086 16070 NRLISQIV True PC9_epitope_Rep3 941.5658149023699 941.56470993586 66.963 2 0.06897197829219567 0.003771880893563896 0.01881714221754821 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 103801 12448 SPVYVGRVV True PC9_epitope_Rep3 974.5549158654999 974.55380993586 52.905 2 0.0689679572565111 0.003771880893563896 0.01881877701211356 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 8725 21680 AVATDFFTV True PC9_epitope_Rep2 969.48074786573 969.4801949679301 88.868 1 0.06896499838137869 0.003771880893563896 0.018819980057827233 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 114758 6415 TQKSLSLSPG True NCI_RA007_Epitope_Rep2 1016.5502244078799 1016.54912993586 29.561 2 0.06896345878022776 0.003771880893563896 0.018820606070614948 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 91517 15802 RIADQFLGA True PC9_epitope_Rep1 989.5294293936499 989.52832993586 65.594 2 0.06895168141244008 0.003771880893563896 0.0188253954682856 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 107283 23354 SVLDGLLYV True PC9_epitope_Rep2 977.54334812229 977.54279496793 95.305 1 0.06894394522079438 0.003771880893563896 0.018828542089029954 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 87441 10811 QPYM[Oxidation]PTVSA True PC9_epitope_Rep5 1008.4586329025999 1008.45752993586 46.574 2 0.06894001930867012 0.003771880893563896 0.01883013910135456 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 128215 12796 VPNKFLVTA True PC9_epitope_Rep2 987.5753169569099 987.57420993586 54.521 2 0.06893661351227774 0.003771880893563896 0.01883152463836077 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 114692 10086 TQHAVGIVV True PC9_epitope_Rep2 922.5236157372199 922.52250993586 44.126 2 0.0689355260635347 0.003771880893563896 0.018831967051182952 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 17343 10459 EHAVGYAL True PC9_epitope_Rep5 858.42356734278 858.42246993586 45.217 2 0.06893467244194067 0.003771880893563896 0.018832314341527996 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant', 'ENST00000494697.5_1_20:2633306-2634895:+|nuORF', 'ENST00000470143.1_1_20:2633306-2634188:+|nuORF'] 107289 21427 SVLDGLLYV True PC9_epitope_Rep6 977.54334812229 977.54279496793 95.295 1 0.06893109158991921 0.003771880893563896 0.01883377125210915 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 90201 3021 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 16.025 2 0.06892305660041312 0.003771880893563896 0.018837040758170456 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 68072 17320 LTDLVDDNYFY True H1975_Epitope_Rep3 1376.6136125100802 1376.61250993586 72.273 2 0.06891972175129167 0.003771880893563896 0.018838397890716074 ['ENSG00000174231|ENST00000304992|PRPF8'] 71021 15675 LYITEPKTI True PC9_epitope_Rep1 1076.61176203528 1076.6106699358602 65.116 2 0.0689171393496791 0.003771880893563896 0.018839448873222295 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 90813 8115 RESVPDLAP True H1975_Epitope_Rep3 982.5083595958998 982.50726993586 36.19 2 0.06890994553099193 0.003771880893563896 0.01884237688979693 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9'] 32121 13232 GETIFVTAP True NCI_RA007_Epitope_Rep5 933.48074786573 933.4801949679301 57.576 1 0.06890281782854185 0.003771880893563896 0.018845278410199312 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 23111 16518 EVISKLYAV True PC9_epitope_Rep3 1020.5855472874398 1020.58444993586 68.672 2 0.06888625815345595 0.003771880893563896 0.01885202105780882 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 106585 5440 STNSFALNK True NCI_RA007_Epitope_Rep5 980.4927095317599 980.49160993586 27.613 2 0.06888579743043989 0.003771880893563896 0.01885220868348321 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'ENST00000579209.1_1_17:62758032-62758825:-|nuORF'] 28896 14779 FTDGDAALEF True H1975_Epitope_Rep2 1084.4713053808398 1084.47020993586 62.007 2 0.06888496123531164 0.003771880893563896 0.018852549221503513 ['ENSG00000173545|ENST00000308683|ZNF622'] 35771 15611 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.51670993586 64.867 2 0.06887348420222772 0.003771880893563896 0.018857223783567197 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 114418 14671 TPTPVPVV True PC9_epitope_Rep4 808.4694549060399 808.46890496793 64.366 1 0.06887249773596697 0.003771880893563896 0.018857625618328724 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 128946 20165 VQIGDIVTV True PC9_epitope_Rep4 942.5385970950199 942.53750993586 85.701 2 0.06886781732840065 0.003771880893563896 0.018859532279312783 ['ENSG00000142534|ENST00000270625|RPS11'] 32927 10509 GIAGSLKTV True PC9_epitope_Rep1 844.5018176634801 844.50072993586 45.313 2 0.06886062179846997 0.003771880893563896 0.018862463874614342 ['ENSG00000008083|ENST00000341776|JARID2'] 68625 22859 LTIDDGIFEV True PC9_epitope_Rep5 1120.56520576568 1120.56467496793 92.925 1 0.0688592063110961 0.003771880893563896 0.018863040620519522 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 46443 17035 ISTEVGITNV True PC9_epitope_Rep2 1031.54989005471 1031.5487899358602 70.775 2 0.06885268782342385 0.003771880893563896 0.018865696814106735 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 105956 5132 SSSPPILTK True NCI_RA007_Epitope_Rep5 928.52294703088 928.52184993586 26.435 2 0.06885053725433342 0.003771880893563896 0.01886657321701944 ['ENSG00000083168|ENST00000265713|KAT6A'] 17414 7795 EHDPVGQM[Oxidation]V True PC9_epitope_Rep2 1026.4440454676198 1026.44294993586 35.355 2 0.06884219079193805 0.003771880893563896 0.018869974935006514 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 62731 11004 LLLPGELAK True H1975_Epitope_Rep1 952.5957180483199 952.59462993586 47.287 2 0.06884112953750512 0.003771880893563896 0.018870407504728254 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 93037 8443 RPLLKAITA True PC9_epitope_Rep4 981.63350053937 981.63240993586 39.941 2 0.06883549922913026 0.003771880893563896 0.018872702584344397 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 10089 12095 AYTPFHAVL True NCI_RA007_Epitope_Rep5 1017.5283667644899 1017.52726993586 53.18 2 0.06883131615377289 0.003771880893563896 0.01887440789596837 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 98097 10811 SESAIRLLAA True H1975_Epitope_Rep2 1029.5818588893299 1029.5807699358602 46.614 2 0.0688290878188307 0.003771880893563896 0.01887531637790014 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 77294 11250 NSDNNTIFV True H1975_Epitope_Rep1 1022.46688870674 1022.46637496793 48.249 1 0.06881495404792602 0.003771880893563896 0.018881079591495414 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 41495 17594 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 72.468 2 0.06881258059293607 0.003771880893563896 0.018882047555341872 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 17359 11660 EHDGSLFQA True PC9_epitope_Rep1 1002.4406739589 1002.43956993586 49.728 2 0.06878593787994544 0.003793103448275862 0.018892916370697562 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 35042 9131 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 39.974 2 0.06876835355500102 0.003793103448275862 0.018900093006873866 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 17386 11693 EHDPHVLLAV True PC9_epitope_Rep6 1128.5927579262 1128.59110490379 56.11 3 0.06875793421873494 0.003793103448275862 0.018904346605519342 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 69925 16340 LVKDVFISA True PC9_epitope_Rep5 990.57498260374 990.57388993586 67.849 2 0.06875088802881242 0.003793103448275862 0.01890722364885786 ['ENSG00000008018|ENST00000262193|PSMB1'] 47997 19111 IYKSIMEQF True PC9_epitope_Rep5 1157.57908200801 1157.5779899358602 78.542 2 0.06874995483243936 0.003793103448275862 0.0189076047143666 ['ENSG00000128298|ENST00000381669|BAIAP2L2', 'nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'BAIAP2L2|p.S465Afs*27|1|0.17|ENSG00000128298|chr22:38086317-38086317|G/-|frameshift_variant'] 73687 22637 MYPLKPTWWF True PC9_epitope_Rep5 1367.6736510991898 1367.6725499358602 92.074 2 0.06874048573404945 0.003793103448275862 0.01891147176854585 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1'] 137816 12148 YEQQTYQVIP True H1975_Epitope_Rep2 1267.60846755999 1267.60736993586 51.813 2 0.06873981694679011 0.003793103448275862 0.01891174491998988 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF'] 114633 17310 TQDTPIPAL True PC9_epitope_Rep6 954.5022115862998 954.50110993586 79.193 2 0.06873693216660193 0.003793103448275862 0.018912923186729016 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 109793 8022 TEEAPIQATP True H1975_Epitope_Rep2 1055.51350454599 1055.5124099358602 35.804 2 0.06873658998450617 0.003793103448275862 0.018913062952923766 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 114227 6148 TPMGPGRTV True PC9_epitope_Rep1 914.46438660894 914.46328993586 28.463 2 0.06872215985522809 0.003793103448275862 0.018918957887965764 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 20056 14974 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.48467496793 62.749 1 0.06870287226904072 0.003793103448275862 0.01892683981885747 ['ENSG00000182195|ENST00000370526|LDOC1'] 93201 5780 RPPPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 27.049 2 0.06870094054541406 0.003793103448275862 0.018927629390553594 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 75378 18128 NITDKGIIAL True PC9_epitope_Rep2 1056.6179100448799 1056.6168099358601 75.031 2 0.06869519057580278 0.003793103448275862 0.018929979810024363 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 55148 16936 LAAGLLEEL True NCI_RA007_Epitope_Rep4 927.52769805815 927.5271449679301 73.392 1 0.06868601587039552 0.003793103448275862 0.018933730719199737 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1', 'ENST00000469476.2_1_1:40313418-40313755:-|nuORF'] 71997 5805 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 27.352 1 0.06867674365411124 0.003793103448275862 0.018937522190809557 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 31891 4496 GELPRQPTT True NCI_RA007_Epitope_Rep5 997.5192586327701 997.51816993586 23.947 2 0.06867097063577576 0.003793103448275862 0.018939883170780495 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 126471 18241 VLLGKVYVV True PC9_epitope_Rep2 988.63210355704 988.63100993586 75.483 2 0.06866896650111333 0.003793103448275862 0.018940702861318423 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 2100 10078 AELGEAPVP True H1975_Epitope_Rep3 881.4494477374499 881.4488949679301 43.803 1 0.06866560720094249 0.003793103448275862 0.018942076887617364 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 124485 8429 VGVNGFGR True PC9_epitope_Rep1 804.4242360491198 804.42312993586 37.258 2 0.06866541752988124 0.003793103448275862 0.018942154469920067 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 96749 20508 SAMEVVPAL True PC9_epitope_Rep3 915.4735543103099 915.47300496793 84.144 1 0.06865745486034837 0.003793103448275862 0.018945411753449444 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 72910 12755 MPTTLEGA True PC9_epitope_Rep5 818.3844049527399 818.38385496793 54.069 1 0.06865386723087759 0.003793103448275862 0.018946879511385305 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 74999 5370 NHQKDIQVL True PC9_epitope_Rep4 1093.58800689893 1093.5869099358601 27.378 2 0.06865103110059682 0.003793103448275862 0.018948039892973306 ['ENSG00000153561|ENST00000283632|RMND5A'] 45310 17428 IPYHIVNIV True PC9_epitope_Rep6 1066.6175161220601 1066.61640993586 79.651 2 0.06863491466862588 0.003793103448275862 0.018954635056476005 ['ENSG00000031698|ENST00000234677|SARS1'] 96085 13179 RYLTVATVF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 57.371 2 0.06863186406839764 0.003793103448275862 0.01895588366099796 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 15311 11208 EAFNMIDQNR True PC9_epitope_Rep6 1236.5557207944798 1236.55462993586 54.09 2 0.06863088415565816 0.003793103448275862 0.018956284753412975 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 29434 17934 FVEEEEHFL True PC9_epitope_Rep1 1177.52915461013 1177.52804993586 73.774 2 0.06862765985133272 0.003793103448275862 0.018957604562953038 ['ENSG00000168159|ENST00000305943|RNF187'] 87204 14850 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49562993586 61.94 2 0.06862229522268634 0.003793103448275862 0.018959800662722712 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 110374 7930 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 35.473 2 0.06861702013747095 0.003793103448275862 0.018961960335328026 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 35821 5122 GTLDPVEK True NCI_RA007_Epitope_Rep4 857.44944773745 857.44834993586 26.216 2 0.06861600964398559 0.003793103448275862 0.018962374067368046 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 9873 13083 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51257496793 55.33 1 0.06861558746685273 0.003793103448275862 0.018962546924197063 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 97669 8480 SEHGLVVIA True NCI_RA007_Epitope_Rep3 923.5076313199099 923.50652993586 40.433 2 0.06861213023459195 0.003793103448275862 0.018963962513193922 ['ENSG00000139684|ENST00000378720|ESD'] 100418 15737 SLADLQNDEV True PC9_epitope_Rep6 1102.5142328219802 1102.5131299358602 72.758 2 0.06860706501151453 0.003793103448275862 0.018966036681880297 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 39292 20946 HIPDVITYL True PC9_epitope_Rep1 1069.58079626017 1069.5796899358602 85.389 2 0.06860612223470379 0.003793103448275862 0.01896642276461736 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 48193 20458 IYPSPTGVLI True PC9_epitope_Rep4 1058.60119735158 1058.60067496793 86.836 1 0.06860245158147421 0.003793103448275862 0.01896792602707316 ['ENSG00000174231|ENST00000304992|PRPF8'] 122137 12022 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.46360993586 51.323 2 0.06858506705545155 0.003793103448275862 0.018975047099573664 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 28874 11378 FTDEEVDELYR True NCI_RA007_Epitope_Rep5 1414.6252398229399 1414.62414993586 50.417 2 0.06857982570336406 0.003793103448275862 0.01897719455311327 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 132463 14451 VVDEIFNEY True H1975_Epitope_Rep1 1126.51825557326 1126.51714993586 60.783 2 0.06857976886468167 0.003793103448275862 0.018977217841926925 ['ENSG00000100220|ENST00000216038|RTCB'] 91043 20910 RFLAATFLL True PC9_epitope_Rep4 1050.6226015025 1050.62150993586 88.59 2 0.06857892819393784 0.003793103448275862 0.0189775622974724 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 85796 5928 QHDPSAVAV True PC9_epitope_Rep5 922.4508447197799 922.44974993586 27.797 2 0.06856789897697502 0.003793103448275862 0.018982081931619526 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 54364 12832 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.5338699358601 54.233 2 0.06856527284406888 0.003793103448275862 0.01898315823419262 ['ENSG00000123975|ENST00000314355|CKS2'] 21023 7454 EQSPTRCTL True PC9_epitope_Rep1 1033.48624425233 1033.4851499358601 33.489 2 0.06855784492916793 0.003793103448275862 0.018986202819115835 ['ENSG00000265808|ENST00000578049|SEC22B'] 24387 13208 FAAGIIAHL True H1975_Epitope_Rep2 911.5228874612301 911.5217899358599 55.932 2 0.06854790833969177 0.003793103448275862 0.018990276374647518 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B', 'nc|ENSG00000203995|Q6WRX3-2|ZYG11A', 'ENSG00000203995|ENST00000371528|ZYG11A'] 35121 4885 GQVVTKTAL True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 26.201 2 0.06854664900234672 0.003793103448275862 0.018990792703992912 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 76905 14958 NRDNVGLVL True PC9_epitope_Rep3 998.5508931142199 998.54978993586 62.667 2 0.06853752906911886 0.003793103448275862 0.018994532270706185 ['ENSG00000013523|ENST00000251089|ANGEL1'] 41608 9218 IADPNIAKL True H1975_Epitope_Rep3 953.55458151233 953.55348993586 40.449 2 0.06853578569289838 0.003793103448275862 0.018995247207646268 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 48644 5622 KAQLQQVEA True PC9_epitope_Rep5 1013.55055876105 1013.54946993586 26.627 2 0.06853478956546342 0.003793103448275862 0.018995655718285015 ['ENSG00000119953|ENST00000369603|SMNDC1', 'ENST00000460483.5_1_10:112057460-112064550:-|nuORF', 'ENST00000471297.1_1_10:112058551-112064550:-|nuORF'] 22 16507 [Acetylation]-AAAAELSLLEK True H1975_Epitope_Rep1 1156.63395434814 1156.63337496793 68.865 1 0.06853237706917266 0.003793103448275862 0.01899664511364446 ['EEF1E1|p.V79Sfs*4|1|0.18|ENSG00000124802|chr6:8097320-8097320|C/-|frameshift_variant', 'nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 103195 19355 SPILVATAV True PC9_epitope_Rep5 869.52221875489 869.52112993586 79.495 2 0.06852234837899777 0.003793103448275862 0.01900075851651692 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 103791 14232 SPVVPQISA True PC9_epitope_Rep6 896.4967322830399 896.49562993586 66.632 2 0.06851929787639965 0.003793103448275862 0.019002009884407627 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 128940 21068 VQIGDIVTV True PC9_epitope_Rep1 942.5385970950199 942.5380449679301 85.871 1 0.06851642745819321 0.003793103448275862 0.01900318744806905 ['ENSG00000142534|ENST00000270625|RPS11'] 78336 17844 NYISGIQTI True PC9_epitope_Rep6 1007.52876068731 1007.52766993586 81.266 2 0.06851385179673586 0.003793103448275862 0.019004244147699696 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 1967 8873 AEIPEEHIP True H1975_Epitope_Rep3 1033.50802524273 1033.5069299358602 39.132 2 0.06850881304223043 0.003793103448275862 0.019006311521042946 ['ENSG00000198218|ENST00000395443|QRICH1'] 9093 18517 AVIGDVIRV True PC9_epitope_Rep5 940.57056592964 940.56946993586 76.25 2 0.06850574155391834 0.003793103448275862 0.019007571837653062 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 44302 16554 ILDEVIMGY True H1975_Epitope_Rep1 1051.5259838059899 1051.52547496793 69.05 1 0.06849688776661453 0.0038095238095238095 0.019011205222990765 ['ENSG00000138160|ENST00000260731|KIF11'] 57950 9812 LEGNLPVSA True H1975_Epitope_Rep1 898.47599683846 898.47544496793 42.669 1 0.06849371446077601 0.0038095238095238095 0.019012507628803146 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 43849 11206 IHSPVVNEL True PC9_epitope_Rep6 1006.54474510462 1006.54364993586 54.083 2 0.0684851013833213 0.0038095238095238095 0.019016043070882536 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 115299 8418 TRHGVPISV True PC9_epitope_Rep1 964.5454138109599 964.54430993586 37.215 2 0.0684760211159343 0.0038095238095238095 0.01901977093897773 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000484693.1_1_6:30709216-30709507:-|nuORF', 'ENST00000484168.1_1_6:30709216-30709966:-|nuORF'] 139521 15351 YLSQDTVSV True PC9_epitope_Rep1 1010.49204082542 1010.49094993586 63.865 2 0.06847413912372315 0.0038095238095238095 0.019020543667838223 ['ENSG00000117984|ENST00000236671|CTSD'] 134385 23124 VYPFPTFQPAF True PC9_epitope_Rep2 1312.6492101731599 1312.64810993586 94.437 2 0.06846419847725645 0.0038095238095238095 0.01902462568731566 ['ENSG00000132017|ENST00000254337|DCAF15'] 27940 21842 FQEGDIILV True PC9_epitope_Rep5 1032.5491617787197 1032.5480699358602 89.049 2 0.06845211641158842 0.0038095238095238095 0.019029588145731854 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 114587 13108 TQDGTPITV True PC9_epitope_Rep3 930.4658260775799 930.4652749679301 55.442 1 0.06843841545071487 0.0038095238095238095 0.019035216976840443 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 138415 14031 YHHGYSYIL True PC9_epitope_Rep5 1151.53999407735 1151.5388899358602 58.986 2 0.06843642406296187 0.0038095238095238095 0.019036035236017233 ['ENSG00000134531|ENST00000256951|EMP1'] 115223 18425 TRDVAFLL True PC9_epitope_Rep4 933.5283667644899 933.52726993586 78.941 2 0.06843580495025235 0.0038095238095238095 0.0190362896354047 ['ENSG00000164291|ENST00000380009|ARSK'] 2870 7530 AEVHPNFTP True H1975_Epitope_Rep2 1010.48214484806 1010.48104993586 33.915 2 0.06843405581940373 0.0038095238095238095 0.019037008387100547 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 26143 19927 FGYPFRLNEA True PC9_epitope_Rep5 1212.5927579262 1212.5916699358602 81.705 2 0.0684256495257927 0.0038095238095238095 0.019040463045055515 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 37857 21325 GYMEGYYTF True PC9_epitope_Rep5 1129.44264810485 1129.44207496793 87.083 1 0.06842218348990946 0.0038095238095238095 0.019041887618661928 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 107831 18783 SVVDGTPLV True PC9_epitope_Rep5 885.48074786573 885.4801949679301 77.261 1 0.06842192952293312 0.0038095238095238095 0.019041992005363242 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 72079 4162 M[Oxidation]EVKPSSVTA True H1975_Epitope_Rep2 1063.52196143515 1063.5208699358602 21.11 2 0.06841870105977355 0.0038095238095238095 0.019043319029491516 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 141927 12947 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.58567496793 54.875 1 0.06839932896975932 0.0038095238095238095 0.019051283505227654 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 104186 20920 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49562993586 85.525 2 0.06839356996855048 0.0038095238095238095 0.019053651804326516 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 11866 15514 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52760993586 64.95 2 0.06838995470997176 0.0038095238095238095 0.019055138661589095 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 88731 20112 QTIQDIVTV True PC9_epitope_Rep5 1015.5549754351499 1015.5544749679301 82.408 1 0.06838575247031382 0.0038095238095238095 0.019056867062680054 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 137319 9874 YDGHLPIEIK True NCI_RA007_Epitope_Rep1 1183.62372370131 1183.62208490379 42.41 3 0.06838275154270725 0.0038095238095238095 0.019058101446948833 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 71829 5302 [Acetylation]-M[Oxidation]EKTELIQK True NCI_RA007_Epitope_Rep5 1176.6060257285797 1176.6049299358601 27.088 2 0.0683765371735509 0.0038095238095238095 0.01906065786427632 ['ENSG00000134308|ENST00000238081|YWHAQ'] 33472 14229 GLATDVQTV True PC9_epitope_Rep1 902.47091145802 902.4703649679301 59.557 1 0.06834974886513477 0.0038095238095238095 0.019071681445043894 ['ENSG00000277791|ENST00000619426|PSMB3'] 106059 4795 STAGFVTGK True NCI_RA007_Epitope_Rep4 866.4497820906199 866.44868993586 24.881 2 0.06834922917171883 0.0038095238095238095 0.019071895360749415 ['ENST00000471951.6_2_20:45927519-45927630:-|nuORF'] 139449 16424 YLPYPIHQV True PC9_epitope_Rep2 1128.5967806774802 1128.59568993586 68.418 2 0.06833814675311624 0.0038095238095238095 0.019076457622162663 ['ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2', 'ENST00000497188.1_1_1:155234069-155238352:-|nuORF'] 4168 12710 AHTPVIISV True PC9_epitope_Rep6 935.54401682863 935.54290993586 60.367 2 0.0683374855820713 0.0038095238095238095 0.01907672983600824 ['ENSG00000182993|ENST00000330828|C12orf60'] 133548 17993 VWSDVTPLTF True NCI_RA007_Epitope_Rep4 1163.58627556343 1163.5857749679299 77.855 1 0.06833681795569957 0.0038095238095238095 0.019077004711242657 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 134364 5902 VYPERSTSY True PC9_epitope_Rep2 1100.51383889916 1100.51274993586 28.097 2 0.06832643582315054 0.0038095238095238095 0.019081279714680852 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 48185 12008 IYPQVLHSL True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 52.849 2 0.06832461869879436 0.0038095238095238095 0.019082028034565306 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 65357 10777 LRDPGSVIV True PC9_epitope_Rep6 954.5498304850599 954.54872993586 52.285 2 0.06831997100801213 0.0038095238095238095 0.019083942148606748 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C'] 4202 21105 AIAPIIAAV True PC9_epitope_Rep1 837.53238951577 837.53128993586 86.008 2 0.06831983171333875 0.0038095238095238095 0.019083999518730414 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF'] 31980 6415 GEQEGAMVAA True H1975_Epitope_Rep2 961.4174959861698 961.41694496793 29.6 1 0.06830948232665839 0.0038095238095238095 0.01908826247847801 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 77563 9378 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46578993586 41.035 2 0.0683092167633276 0.0038095238095238095 0.019088371876787455 ['ENSG00000204019|ENST00000371894|CT83'] 93356 18666 RPYQPLGALVV True PC9_epitope_Rep4 1211.70264272835 1211.7015499358602 79.876 2 0.06830446469030274 0.0038095238095238095 0.019090329582010675 ['ENSG00000095906|ENST00000262302|NUBP2'] 142669 19530 YYPNPPLVL True PC9_epitope_Rep6 1074.57498260374 1074.57388993586 87.785 2 0.06829425133660003 0.0038095238095238095 0.019094537790586615 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 7985 19023 ATDFGEALV True PC9_epitope_Rep4 921.4443623570098 921.44381496793 81.262 1 0.06829130501507542 0.0038095238095238095 0.019095751922588222 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 32417 17933 GFSLEELR True PC9_epitope_Rep1 949.4868958753299 949.48578993586 73.77 2 0.06827968018651043 0.0038095238095238095 0.019100543023395693 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 119076 17470 VAGMPVFL True H1975_Epitope_Rep2 832.4516966669199 832.4511449679301 72.491 1 0.0682763637433652 0.0038095238095238095 0.01910191007808599 ['ENSG00000139410|ENST00000403593|SDSL'] 106872 13551 SVDDGITLY True H1975_Epitope_Rep1 981.46549172441 981.46494496793 57.248 1 0.06826879177565931 0.0038095238095238095 0.019105031619843553 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 27970 17659 FQGVEFHYV True PC9_epitope_Rep4 1124.5290950404801 1124.5279899358602 75.951 2 0.06826505672479317 0.0038095238095238095 0.01910657156689161 ['ENSG00000143815|ENST00000272163|LBR'] 31072 16942 GATSLVTLL True H1975_Epitope_Rep2 873.51713337445 873.51658496793 70.412 1 0.06826464375136933 0.0038095238095238095 0.01910674184126856 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 41186 19230 HVIDLDDATFL True PC9_epitope_Rep6 1257.62411762413 1257.6230299358601 86.62 2 0.06825154639748642 0.0038095238095238095 0.01911214277877084 ['ENSG00000152219|ENST00000282032|ARL14EP'] 99314 20080 SHSFVVNIL True PC9_epitope_Rep3 1014.5498304850599 1014.54872993586 82.489 2 0.06824726270199202 0.0038095238095238095 0.019113909545861455 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 42855 15083 IEQPTPFLP True H1975_Epitope_Rep2 1040.5542471591598 1040.55367496793 63.168 1 0.06824664265919336 0.0038095238095238095 0.01911416528875282 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 40739 2556 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 14.742 3 0.06822581408475323 0.0038095238095238095 0.019122758077791104 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 21145 7231 ERAQGVVL True PC9_epitope_Rep2 870.4923156089399 870.49120993586 33.203 2 0.06821489077444085 0.0038095238095238095 0.019127265892876194 ['ENSG00000136950|ENST00000353214|ARPC5L'] 75430 12297 NIVPVIAKA True PC9_epitope_Rep4 923.5804023373499 923.57930993586 55.114 2 0.06821305560781246 0.0038095238095238095 0.019128023322800843 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 97500 12035 SEEPAEILPPA True H1975_Epitope_Rep2 1151.5710194221099 1151.56992993586 51.374 2 0.06820436827150704 0.0038095238095238095 0.019131609230138406 ['ENSG00000131370|ENST00000383791|SH3BP5'] 30010 22645 FYAHIIPFL True PC9_epitope_Rep1 1119.6117024656298 1119.61060993586 91.91 2 0.0681925415707346 0.0038095238095238095 0.019136491982347608 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 109943 11542 TEGINLVTA True H1975_Epitope_Rep2 916.48656152216 916.48601496793 49.456 1 0.06818195911325102 0.0038095238095238095 0.0191408620125845 ['ENSG00000181004|ENST00000314218|BBS12'] 5994 9279 APIIDVVR True H1975_Epitope_Rep3 881.53345214493 881.53234993586 40.686 2 0.06818124883187887 0.0038095238095238095 0.019141155356530905 ['ENSG00000166441|ENST00000314138|RPL27A'] 142349 17675 YYEHEFVEL True PC9_epitope_Rep4 1227.5448046742697 1227.54370993586 76.012 2 0.06818025447742695 0.0038095238095238095 0.019141566028720296 ['nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 10942 6669 DAFPVHRV True NCI_RA007_Epitope_Rep2 939.49264996211 939.49154993586 30.553 2 0.06815357779204419 0.0038095238095238095 0.019152586635474082 ['nc|ENSG00000003096|Q9P2N7-2|KLHL13', 'ENSG00000003096|ENST00000540167|KLHL13', 'nc|ENSG00000003096|Q9P2N7-4|KLHL13', 'nc|ENSG00000003096|Q9P2N7|KLHL13', 'nc|ENSG00000003096|Q9P2N7-5|KLHL13', 'KLHL13|p.H478Tfs*12|1|0.14|ENSG00000003096|chrX:117901881-117901881|G/-|frameshift_variant'] 108054 17470 SYAELGTTI True PC9_epitope_Rep4 953.47057710485 953.46948993586 75.196 2 0.0681428465510961 0.0038095238095238095 0.019157021549537984 ['ENSG00000151012|ENST00000280612|SLC7A11'] 90776 6956 RESDVGVVV True H1975_Epitope_Rep3 958.5083595958998 958.50726993586 31.718 2 0.06814190163180585 0.0038095238095238095 0.01915741210293888 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 6294 6228 APRGTGIVSA True PC9_epitope_Rep5 927.5137793295098 927.51268993586 28.935 2 0.06814085538106165 0.0038095238095238095 0.019157844547153684 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 20051 14795 EMDSPILGDY True H1975_Epitope_Rep1 1138.4852411928198 1138.48467496793 62.134 1 0.06813986743670994 0.0038095238095238095 0.019158252899996033 ['ENSG00000182195|ENST00000370526|LDOC1'] 28098 19428 FQVRDIENL True PC9_epitope_Rep3 1132.58767254576 1132.58656993586 79.955 2 0.06813975062743752 0.0038095238095238095 0.0191583011819894 ['ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-5|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2'] 65003 18522 LQIAGLEHL True PC9_epitope_Rep4 992.5654805492 992.56438993586 79.318 2 0.06813691576065221 0.0038095238095238095 0.019159472981416414 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 107353 19818 SVLGSLSSV True PC9_epitope_Rep2 847.4650978015901 847.46454496793 81.62 1 0.06813292322318255 0.0038095238095238095 0.01916112341907097 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF', 'nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 40205 10804 HQGPATTVAF True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 46.444 2 0.068114439731746 0.0038095238095238095 0.01916876584499953 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 35233 14249 GRAPQVLVL True PC9_epitope_Rep4 951.5865503469499 951.58544993586 62.713 2 0.06810873000233308 0.0038095238095238095 0.01917112723255747 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 134362 7085 VYPERSTSY True PC9_epitope_Rep1 1100.51383889916 1100.51274993586 32.06 2 0.06809758303919007 0.0038095238095238095 0.019175738083997418 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 111480 7967 THVGPTPAI True PC9_epitope_Rep4 891.48141657207 891.48030993586 38.09 2 0.06809054440919349 0.0038095238095238095 0.01917865008325051 ['ENSG00000157259|ENST00000287957|GATAD1'] 35227 14634 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.58544993586 61.558 2 0.06808979775125124 0.0038095238095238095 0.019178959012082695 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 38044 11414 HASDRIIAL True PC9_epitope_Rep5 994.5559784946599 994.55488993586 48.903 2 0.06808918816001727 0.0038095238095238095 0.019179211233130395 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 103788 15999 SPVVPQISA True PC9_epitope_Rep5 896.4967322830399 896.49562993586 66.53 2 0.06807279185146305 0.0038095238095238095 0.019185996425364248 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 11051 10972 DAVEDLESVGK True NCI_RA007_Epitope_Rep5 1160.55609763396 1160.5550099358602 48.841 2 0.06805789663619134 0.0038095238095238095 0.019192162347297065 ['ENSG00000161634|ENST00000293371|DCD', 'nc|ENSG00000161634|P81605-2|DCD'] 84858 10745 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 46.41 2 0.06805249126844443 0.0038095238095238095 0.019194400368348664 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 42982 7779 IESRTLAIA True NCI_RA007_Epitope_Rep4 972.5603951687599 972.55928993586 36.603 2 0.06805037484154693 0.0038095238095238095 0.019195276712478664 ['ENSG00000147872|ENST00000276914|PLIN2'] 45710 16251 IRPENVIIY True PC9_epitope_Rep2 1115.6338944621898 1115.63278993586 67.752 2 0.06804723195493949 0.0038095238095238095 0.019196578148544936 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 13964 7494 DRDPASGTAL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 33.645 2 0.06803531122898296 0.0038095238095238095 0.01920151513450596 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 87440 9899 QPYM[Oxidation]PTVSA True PC9_epitope_Rep4 1008.4586329025999 1008.45752993586 45.727 2 0.06802352800615065 0.0038095238095238095 0.01920639632386517 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 130809 17631 VTAPELNSI True PC9_epitope_Rep2 942.5022115863001 942.50110993586 73.099 2 0.06802240474179144 0.0038095238095238095 0.01920686169483134 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF'] 36797 14777 GVLDAILATK True NCI_RA007_Epitope_Rep5 999.59644632431 999.59534993586 63.513 2 0.0680163636248389 0.0038095238095238095 0.019209364721580944 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 33028 20440 GIIDAFHQI True PC9_epitope_Rep5 1012.5341804209202 1012.53308993586 83.66 2 0.06801592939609791 0.0038095238095238095 0.019209544647934278 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 97469 11534 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 49.491 1 0.06799320419255107 0.0038095238095238095 0.019218963197223504 ['ENSG00000135900|ENST00000258383|MRPL44'] 125932 14939 VLDDNRLLT True PC9_epitope_Rep2 1057.57677350889 1057.57566993586 62.722 2 0.06798036678051685 0.0038095238095238095 0.019224285594482405 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'DYNC2H1|p.G2197Wfs*36|1|0.44|ENSG00000187240|chr11:103185004-103185005|-/T|frameshift_variant'] 132183 11461 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 51.015 2 0.06797182727930809 0.0038095238095238095 0.01922782682844455 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 96479 10428 SAAQPLNL True H1975_Epitope_Rep2 812.43921740692 812.43812993586 45.125 2 0.06796821954532672 0.0038095238095238095 0.019229323095371034 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 77556 12891 NTDNLLTEY True H1975_Epitope_Rep2 1081.49276910141 1081.49217496793 54.698 1 0.0679607919183357 0.0038095238095238095 0.01923240395780389 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 115614 13847 TRVDPLTL True PC9_epitope_Rep4 913.5232813840499 913.52218993586 61.164 2 0.06795823527887593 0.0038095238095238095 0.019233464516770372 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 26440 18079 FIDDANYSV True PC9_epitope_Rep2 1042.4607406971402 1042.4596499358602 74.843 2 0.06794267985954583 0.0038095238095238095 0.01923991846180712 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 8633 18320 AVAAVLTQV True PC9_epitope_Rep5 870.5174677276199 870.51636993586 75.482 2 0.06793354694780042 0.0038095238095238095 0.019243708637981475 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 133758 15394 VYEGPELNHAF True PC9_epitope_Rep4 1274.59315184902 1274.5920499358601 67.146 2 0.06792561765301063 0.0038095238095238095 0.01924699986900355 ['ENSG00000123384|ENST00000243077|LRP1'] 112800 21903 TLIEDILGV True PC9_epitope_Rep6 971.5539128059899 971.55280993586 97.152 2 0.0679000395520749 0.0038095238095238095 0.019257620168633707 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 116414 6962 TTISKVSQV True PC9_epitope_Rep5 961.5444107514498 961.54330993586 31.747 2 0.06788090944452994 0.0038095238095238095 0.019265566723651886 ['ENSG00000065183|ENST00000349139|WDR3'] 25443 16037 FEEDGLGVLP True H1975_Epitope_Rep2 1074.5233409536997 1074.52277496793 66.885 1 0.06787805841140057 0.0038095238095238095 0.019266751287940195 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 48961 6021 KEEPIPCTA True H1975_Epitope_Rep3 986.4742825862999 986.47318993586 28.172 2 0.06786227091038537 0.0038095238095238095 0.019273311988601254 ['ENSG00000124588|ENST00000380455|NQO2'] 47975 14610 IYKDSSTFL True PC9_epitope_Rep3 1072.5440763982801 1072.5429699358601 61.329 2 0.06785158415402354 0.0038095238095238095 0.019277754177460013 ['ENSG00000145388|ENST00000388822|METTL14'] 49010 11104 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 50.78 2 0.0678502707936843 0.0038095238095238095 0.01927830017012111 ['ENSG00000197747|ENST00000368811|S100A10'] 76898 14757 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.54978993586 61.581 2 0.06783597746801394 0.0038095238095238095 0.019284243140461628 ['ENSG00000013523|ENST00000251089|ANGEL1'] 140766 12825 YSDFPFHEDY True H1975_Epitope_Rep3 1318.51423282198 1318.5131299358602 54.551 2 0.06782892438433737 0.0038095238095238095 0.01928717633890518 ['FMO4|p.S512Yfs*4|1|0.05|ENSG00000076258|chr1:171341697-171341697|C/-|frameshift_variant', 'ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 115066 6317 TRDEDHIAL True PC9_epitope_Rep4 1068.51998690876 1068.5188899358602 31.36 2 0.06782659195524893 0.0038095238095238095 0.019288146427430864 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 131 19686 AAAWPLLL True NCI_RA007_Epitope_Rep4 853.5061747679299 853.5056249679301 85.073 1 0.06782523549439164 0.0038095238095238095 0.019288710618369113 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 17809 6557 EHSTEGSVSL True PC9_epitope_Rep2 1044.47236801 1044.4712699358602 30.634 2 0.06782295862967229 0.0038095238095238095 0.019289657665842584 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 41479 14317 HYLPDLHHL True PC9_epitope_Rep1 1143.5825275956702 1143.5808749037901 59.894 3 0.0678227406830012 0.0038095238095238095 0.019289748321629063 ['ENSG00000130702|ENST00000252999|LAMA5'] 6515 7157 APTGDLPRA True PC9_epitope_Rep1 896.4715801643599 896.47048993586 32.34 2 0.0678089008087484 0.0038095238095238095 0.019295505876810566 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 109153 21429 TAMDVVYAL True PC9_epitope_Rep2 981.4841189940099 981.48357496793 87.899 1 0.06779524814805493 0.0038095238095238095 0.019301187100848567 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 72125 19797 [Acetylation]-M[Oxidation]FLVNSFLK True H1975_Epitope_Rep3 1155.5998181493298 1155.59872993586 82.891 2 0.06779342646566808 0.0038095238095238095 0.019301945266421944 ['ENSG00000126247|ENST00000246533|CAPNS1'] 87246 20012 QPLPVILHV True PC9_epitope_Rep5 1014.6226015025001 1014.62150993586 82.032 2 0.06779056013094643 0.0038095238095238095 0.019303138261185262 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 73904 15268 NAVYTFETL True NCI_RA007_Epitope_Rep5 1056.51277627 1056.51166993586 65.419 2 0.06778858287573054 0.0038290905249815147 0.0193039612525259 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 66074 9786 LSEINKPNFY True H1975_Epitope_Rep1 1223.61863832087 1223.61754993586 42.572 2 0.06778477711554984 0.0038290905249815147 0.01930554541204299 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 40296 9949 HQNQLLSSL True NCI_RA007_Epitope_Rep5 1038.5458077337798 1038.54470993586 44.91 2 0.06778455971963833 0.0038290905249815147 0.019305635907385314 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 86075 16400 QHSITPLAL True PC9_epitope_Rep3 978.5498304850599 978.54872993586 68.221 2 0.06777079011925571 0.0038290905249815147 0.01931136857224905 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 5101 19990 ALLGGLVNV True PC9_epitope_Rep6 854.52255310806 854.52144993586 89.558 2 0.067767555342419 0.0038290905249815147 0.019312715526734033 ['ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 8593 3828 ATVTPSPVK True NCI_RA007_Epitope_Rep5 898.5123823471799 898.51128993586 20.943 2 0.06776531792182668 0.0038290905249815147 0.0193136472347696 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 126304 20634 VLIENVASL True PC9_epitope_Rep2 956.5542471591599 956.55369496793 84.803 1 0.06775888149833996 0.0038290905249815147 0.01931632772513924 ['ENSG00000176153|ENST00000389614|GPX2'] 30067 15791 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6171499358602 72.992 2 0.06775827217094041 0.0038290905249815147 0.019316581501258173 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 41414 18300 HYGLPVVV True PC9_epitope_Rep5 882.49633836022 882.49524993586 75.405 2 0.06775290829887727 0.0038290905249815147 0.019318815609599378 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 39209 13819 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45884993586 58.173 2 0.06775263618794976 0.0038290905249815147 0.019318928952969525 ['ENSG00000132646|ENST00000379143|PCNA'] 78429 13551 NYLSIFRKF True NCI_RA007_Epitope_Rep4 1186.6498788795 1186.6487899358601 59.33 2 0.06775040982156888 0.0038290905249815147 0.019319856332606473 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 119355 10233 VAPEEHPVLL True NCI_RA007_Epitope_Rep2 1102.60225998074 1102.60116993586 44.395 2 0.06774947375091456 0.0038290905249815147 0.019320246259506235 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 111464 10498 THTTPVLL True PC9_epitope_Rep4 880.5018176634799 880.50072993586 48.101 2 0.06774625321640194 0.0038290905249815147 0.019321587851506457 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 53305 18109 KQLDFTYEM True PC9_epitope_Rep5 1173.53761111885 1173.53650993586 74.668 2 0.06774502938113064 0.0038290905249815147 0.01932209769237503 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81'] 73424 22551 MTVDDLLSL True PC9_epitope_Rep4 1005.5052483614099 1005.5046749679301 94.981 1 0.06772063637535118 0.0038290905249815147 0.019332262227860175 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 118693 12058 TYTDVTPRQF True PC9_epitope_Rep4 1226.59315184902 1226.5920499358601 54.187 2 0.06771984935362396 0.0038290905249815147 0.019332590260894525 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 139410 21010 YLPDSLTQL True PC9_epitope_Rep2 1048.54407639828 1048.54357496793 86.269 1 0.06771435660612578 0.0038290905249815147 0.019334879797487815 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 98140 11699 SESPITVEV True H1975_Epitope_Rep1 959.48114178855 959.4805949679301 49.991 1 0.06771364307885598 0.0038290905249815147 0.019335177234703703 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 54704 11660 KYLYVDKNF True PC9_epitope_Rep2 1188.6179100448796 1188.6168099358601 50.182 2 0.06770906460393875 0.0038290905249815147 0.019337085893962977 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 114385 15701 TPSPLPTV True PC9_epitope_Rep1 810.4487194614601 810.44762993586 65.216 2 0.06770837848062909 0.0038290905249815147 0.019337371937705822 ['ENSG00000099331|ENST00000682292|MYO9B', 'MYO9B|p.A2031T|1|0.31|ENSG00000099331|chr19:17211927-17211927|G/A|missense_variant'] 76373 7854 NQADKAINTAV True PC9_epitope_Rep5 1143.5884008217502 1143.58730993586 35.153 2 0.06770664540245758 0.0038290905249815147 0.019338094472670386 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 1961 8605 AEIPEEHIP True H1975_Epitope_Rep1 1033.50802524273 1033.5069299358602 38.026 2 0.06769954464982876 0.0038290905249815147 0.019341055096377423 ['ENSG00000198218|ENST00000395443|QRICH1'] 120177 3052 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 16.105 2 0.06769636956603475 0.0038290905249815147 0.01934237906701616 ['ENSG00000155506|ENST00000518297|LARP1'] 99260 10655 SHQGDYAVL True PC9_epitope_Rep3 988.4614094034798 988.46030993586 45.93 2 0.06768976372325419 0.0038290905249815147 0.0193451338893425 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT', 'AASDHPPT|p.Y174Ifs*11|1|0.09|ENSG00000149313|chr11:106090664-106090664|T/-|frameshift_variant'] 118336 12458 TYMKDLYQL True NCI_RA007_Epitope_Rep4 1173.5739966275698 1173.57288993586 54.928 2 0.06768787780769599 0.0038290905249815147 0.01934592043554642 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 79266 8811 PAPPPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 38.841 2 0.0676837874479207 0.0038290905249815147 0.019347626475854175 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 104016 11690 SQDGHQWTL True PC9_epitope_Rep4 1070.4781220967802 1070.4770299358602 52.728 2 0.06767648330230307 0.0038290905249815147 0.01935067329277891 ['ENSG00000185010|ENST00000360256|F8', 'nc|ENSG00000185010|P00451-2|F8'] 23744 18441 EYGIFNQKI True PC9_epitope_Rep1 1110.57095985246 1110.5698699358602 75.724 2 0.06767021035042113 0.0038290905249815147 0.019353290315329227 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 40400 5743 HQVLQTRL True NCI_RA007_Epitope_Rep4 993.57196291197 993.57086993586 28.708 2 0.0676685329848177 0.0038290905249815147 0.01935399015335929 ['nc|ENSG00000133059|Q6XUX3-3|DSTYK', 'nc|ENSG00000133059|Q6XUX3-2|DSTYK', 'ENSG00000133059|ENST00000367162|DSTYK'] 96169 12990 RYPDRITLI True PC9_epitope_Rep6 1145.65569253593 1145.65405490379 61.543 3 0.06766196184576642 0.0038290905249815147 0.01935673201822689 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 92156 10582 RLELTELEA True H1975_Epitope_Rep1 1072.57643915572 1072.57534993586 45.658 2 0.06766051255028481 0.0038290905249815147 0.01935733679753873 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'ENST00000418039.2_1_15:78290504-78290759:-|nuORF', 'ENST00000491479.1_1_15:78290504-78294097:-|nuORF'] 41196 17092 HVIGSLAEI True PC9_epitope_Rep3 937.5232813840499 937.52218993586 70.896 2 0.06765916684875967 0.0038290905249815147 0.019357898363518585 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 69569 16885 LVDEWLDSY True H1975_Epitope_Rep2 1138.51825557326 1138.51714993586 70.193 2 0.06765209743512222 0.0038290905249815147 0.01936084870129457 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 96464 13623 SAAMPGASL True PC9_epitope_Rep5 803.38473930591 803.38364993586 57.424 2 0.0676493527541512 0.0038290905249815147 0.01936199427372426 ['ENSG00000086062|ENST00000379731|B4GALT1'] 67965 16346 LTDEAFEFY True H1975_Epitope_Rep1 1133.49170647225 1133.49117496793 68.234 1 0.06764733102024537 0.0038290905249815147 0.019362838143120245 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 103512 13607 SPREVFFRV True PC9_epitope_Rep2 1135.61382772395 1135.61218490379 57.629 3 0.06764293047150509 0.0038290905249815147 0.01936467504425056 ['nc|ENSG00000087088|Q07812-6|BAX', 'nc|ENSG00000087088|Q07812-4|BAX', 'nc|ENSG00000087088|Q07812-7|BAX', 'nc|ENSG00000087088|Q07812-8|BAX', 'ENST00000513545.5_1_19:49458896-49464890:+|nuORF', 'ENSG00000087088|ENST00000345358|BAX', 'nc|ENSG00000087088|Q07812-5|BAX', 'nc|ENSG00000087088|Q07812-2|BAX'] 11995 4812 DHQQNSPTL True PC9_epitope_Rep4 1038.47303671634 1038.47192993586 25.085 2 0.06764115841380022 0.0038290905249815147 0.019365414791623996 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.E121Q|1|0.18|ENSG00000173614|chr1:9981092-9981092|G/C|missense_variant'] 36616 21508 GVIAGLNVL True PC9_epitope_Rep2 854.52255310806 854.52144993586 88.198 2 0.06763944853776101 0.0038290905249815147 0.019366128605880925 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 6568 11742 APVAEVPTA True PC9_epitope_Rep5 853.4545331178899 853.45342993586 50.166 2 0.06763664738977361 0.0038290905249815147 0.019367298040923176 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 20882 20594 EQLGTFTTL True PC9_epitope_Rep5 1008.51277627 1008.51227496793 84.261 1 0.0676334622934791 0.0038290905249815147 0.019368627847382677 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 34784 19129 GQGEVLVYV True PC9_epitope_Rep4 962.5072969667398 962.5067449679301 81.672 1 0.06762937633050273 0.0038290905249815147 0.019370333897016232 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 116668 8072 TVAVPLVGK True NCI_RA007_Epitope_Rep3 882.5538532363399 882.55274993586 38.843 2 0.06762459640630954 0.0038290905249815147 0.01937232987839728 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 101606 14793 SLLQPLNV True NCI_RA007_Epitope_Rep3 882.51746772762 882.51636993586 65.611 2 0.06761617798502458 0.0038290905249815147 0.019375845669486542 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT3|p.V305*|1|0.36|ENSG00000186442|chr12:52793177-52793177|C/-|frameshift_variant', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546'] 85727 11546 QHAVEAISL True PC9_epitope_Rep4 966.5134449763399 966.51234993586 52.174 2 0.06760932836469304 0.0038290905249815147 0.019378706714952655 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 138606 8111 YIDQEELNK True PC9_epitope_Rep3 1150.5506183307 1150.5495299358602 36.174 2 0.06760331804430729 0.0038290905249815147 0.01938121751049697 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 97266 8489 SEAEKVYIV True H1975_Epitope_Rep3 1036.5440763982797 1036.5429699358601 37.638 2 0.06758396222564499 0.0038290905249815147 0.019389305390081393 ['ENSG00000075914|ENST00000265564|EXOSC7'] 9445 14176 AVVESMVTA True PC9_epitope_Rep2 905.4528188657299 905.45172993586 59.795 2 0.06757988123706495 0.0038290905249815147 0.01939101103878282 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 111210 13678 THISDTSVVL True PC9_epitope_Rep5 1070.56078909158 1070.56027496793 57.637 1 0.06757702325459078 0.0038290905249815147 0.01939220561453605 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 34794 13285 GQGQIYVHL True PC9_epitope_Rep4 1013.5294293936499 1013.52832993586 58.996 2 0.06756814976168693 0.0038290905249815147 0.019395914977527372 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 133233 7069 VVSTQTALA True H1975_Epitope_Rep3 888.4916469025999 888.49109496793 32.158 1 0.06756711306205299 0.0038290905249815147 0.019396348389008302 ['CON__P02769'] 41586 16829 IAAGIFNDL True NCI_RA007_Epitope_Rep5 932.4967322830399 932.49618496793 71.482 1 0.0675629873093742 0.0038290905249815147 0.019398073324744997 ['ENSG00000136930|ENST00000259457|PSMB7'] 32228 13949 GEYGNLVTI True NCI_RA007_Epitope_Rep5 964.48656152216 964.48546993586 60.338 2 0.06755946077122438 0.0038290905249815147 0.01939954784694718 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 21364 12354 ERGENYIL True PC9_epitope_Rep5 992.4927095317598 992.49160993586 52.514 2 0.06753960219342686 0.0038290905249815147 0.019407853078016162 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF'] 105711 13191 SSEQTFMYY True H1975_Epitope_Rep3 1154.4590264449798 1154.4579299358602 55.991 2 0.06753382602817273 0.0038290905249815147 0.01941026939400156 ['ENSG00000115758|ENST00000234111|ODC1'] 128303 6410 VPPPPPIAR True H1975_Epitope_Rep3 942.56508662638 942.56398993586 29.633 2 0.06753374617813376 0.0038290905249815147 0.01941030279923424 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 7124 12535 AQVVQVVL True NCI_RA007_Epitope_Rep3 854.5225531080598 854.52200496793 56.54 1 0.06751582562114854 0.0038290905249815147 0.01941780119730512 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.K423R|1|0.3|ENSG00000186432|chr3:160508211-160508211|T/C|missense_variant'] 98862 20502 SGVEVLVSV True PC9_epitope_Rep1 887.4963979298699 887.4958449679301 83.673 1 0.06750149297993296 0.0038290905249815147 0.01942380024462605 ['ENSG00000198695|ENST00000361681|MT-ND6'] 18831 8758 ELDPDNETY True H1975_Epitope_Rep3 1094.44039917538 1094.4398749679299 38.693 1 0.06749919523259082 0.0038290905249815147 0.019424762144868313 ['ENSG00000104969|ENST00000221566|SGTA'] 134442 22435 VYPNWAIGL True PC9_epitope_Rep5 1031.5440168286298 1031.54290993586 91.295 2 0.06748249644134381 0.0038290905249815147 0.019431754036738108 ['ENSG00000131389|ENST00000622186|SLC6A6'] 43861 13502 IHSSIVSTL True PC9_epitope_Rep1 955.5338460677501 955.53274993586 56.791 2 0.06747631248508211 0.0038290905249815147 0.019434343887458957 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 34997 6133 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 28.985 2 0.06747561944317311 0.0038290905249815147 0.01943463415432838 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 98263 10209 SEVEVIHVP True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 45.901 2 0.06746935757972365 0.0038290905249815147 0.019437256992821145 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 29556 22842 FVIDGFDEL True PC9_epitope_Rep3 1053.50187723313 1053.50137496793 93.133 1 0.06746748616755306 0.0038290905249815147 0.019438040914129238 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 58578 11796 LEQNIQLPAA True H1975_Epitope_Rep3 1095.59242357303 1095.5913299358601 50.519 2 0.06746546441159558 0.0038290905249815147 0.01943888784611565 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 3935 15505 AHDDSVMYL True PC9_epitope_Rep3 1049.44879611445 1049.4476899358601 64.791 2 0.06746175786922706 0.0038290905249815147 0.0194404406387705 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 21333 13275 ERFEKTFQL True PC9_epitope_Rep2 1196.6189726740397 1196.6178699358602 56.34 2 0.06744385841860807 0.0038290905249815147 0.019447940916522504 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 26093 13128 FGPGVAFR True PC9_epitope_Rep2 849.4497225209699 849.44862993586 55.77 2 0.06743159147330273 0.0038290905249815147 0.019453082585527963 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 32893 8170 GHSTAVVSL True PC9_epitope_Rep4 869.46068112749 869.45958993586 38.881 2 0.06742126258486204 0.0038290905249815147 0.01945741289241922 ['ENSG00000156463|ENST00000359120|SH3RF2'] 56122 15509 LAVDAVIAELK True NCI_RA007_Epitope_Rep2 1140.675424921 1140.6743299358602 65.032 2 0.06741536960050959 0.0038400841662283008 0.019459883878515268 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 92180 7340 RLFVGSIPK True NCI_RA007_Epitope_Rep3 1015.6178504752298 1015.61674993586 35.996 2 0.06740698578757225 0.0038400841662283008 0.019463399791616688 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 93563 10162 RQLPAMTAL True NCI_RA007_Epitope_Rep4 999.5535359665099 999.55242993586 45.945 2 0.06740646560312365 0.0038400841662283008 0.019463617960242565 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 45608 21342 IQYIPTELDQV True PC9_epitope_Rep5 1317.68163250025 1317.68052993586 87.151 2 0.06740167467692054 0.0038400841662283008 0.019465627410711343 ['ENSG00000149100|ENST00000531120|EIF3M'] 96435 18306 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41156993586 75.428 2 0.06739443110274737 0.0038400841662283008 0.019468665934268225 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 133630 17421 VYAFSIENF True NCI_RA007_Epitope_Rep3 1088.5178616504397 1088.51676993586 76.435 2 0.06739036000161024 0.0038400841662283008 0.01947037386540218 ['nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS', 'ENST00000528557.5_1_1:26759436-26769365:+|nuORF'] 110213 9606 TEQPPSPLP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 41.925 2 0.06738556378593877 0.0038400841662283008 0.019472386177724104 ['ENSG00000075568|ENST00000186436|TMEM131'] 37975 14909 HAGVISVL True PC9_epitope_Rep3 794.46503823194 794.46448496793 62.483 1 0.06738527927571104 0.0038400841662283008 0.019472505553570527 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 53820 14551 KTELGSFFTEY True H1975_Epitope_Rep2 1320.6237832709598 1320.62268993586 61.126 2 0.06738243498823893 0.0038400841662283008 0.019473699007212925 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000459857.5_1_22:45072965-45122509:+|nuORF', 'ENST00000492289.5_1_22:45073049-45126704:+|nuORF', 'ENST00000495250.2_1_22:45121127-45205177:+|nuORF'] 77162 8829 NRPSVQAAL True PC9_epitope_Rep5 954.5246783663799 954.52358993586 38.906 2 0.06737232204137424 0.0038400841662283008 0.01947794291204849 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 48021 15402 IYLPEVRKI True PC9_epitope_Rep1 1129.68593003505 1129.68427490379 64.063 3 0.06737122385116488 0.0038400841662283008 0.019478403819571548 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 8560 9231 ATVGHGLTAV True PC9_epitope_Rep5 924.5028802926399 924.50178993586 40.454 2 0.06736983064860348 0.0038400841662283008 0.019478988557454436 ['FAM114A1|p.E412Rfs*27|1|0.09|ENSG00000197712|chr4:38931521-38931522|-/T|frameshift_variant', 'ENSG00000197712|ENST00000358869|FAM114A1'] 96682 15525 SAKSWPIFL True H1975_Epitope_Rep2 1047.57531695691 1047.5742099358602 64.872 2 0.06736435774407795 0.0038400841662283008 0.019481285734301027 ['ENSG00000162928|ENST00000295030|PEX13'] 98949 7622 SHANSAVVL True PC9_epitope_Rep3 896.47158016436 896.47048993586 34.315 2 0.06735995742839261 0.0038400841662283008 0.019483132887616317 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 31476 12837 GEAPVPVLP True H1975_Epitope_Rep1 877.4909186266099 877.49037496793 54.444 1 0.06735714247784515 0.0038400841662283008 0.019484314624999298 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 72880 8510 MPRQLSAAAA True PC9_epitope_Rep5 1014.5280494946599 1014.52694993586 37.676 2 0.06735709923336305 0.0038400841662283008 0.0194843327798726 ['ENSG00000078081|ENST00000265598|LAMP3'] 17394 11438 EHDPQYAVI True PC9_epitope_Rep4 1070.50327421546 1070.5021699358601 51.766 2 0.06734818782869985 0.0038400841662283008 0.01948807429304776 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 40570 4649 HRGTGIAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 24.403 2 0.06734048944267265 0.0038400841662283008 0.019491307044965187 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 40543 13661 HRFPFSSAL True PC9_epitope_Rep6 1060.5454138109599 1060.5443099358602 64.33 2 0.06733720194935626 0.0038400841662283008 0.019492687699152383 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 1215 7942 AEDDLNTVAA True H1975_Epitope_Rep1 1017.46146897313 1017.46036993586 35.498 2 0.06733496142989293 0.0038400841662283008 0.019493628705556054 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 86015 12126 QHNDLEFKL True PC9_epitope_Rep6 1142.57202248162 1142.57038490379 57.986 3 0.06732781741293054 0.0038400841662283008 0.01949662943455976 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 73637 20475 MWSPTHPALF True PC9_epitope_Rep2 1185.5641006502099 1185.56300993586 84.186 2 0.06732432801608532 0.0038400841662283008 0.019498095254025155 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 104109 4841 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.49 2 0.06730312127032055 0.0038400841662283008 0.019507005928358228 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 96083 13447 RYLTVATVF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 58.917 2 0.0672987582582007 0.0038400841662283008 0.01950883964884337 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 77505 14154 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41867496793 59.597 1 0.06729770001745783 0.0038400841662283008 0.019509284438372104 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 86124 19756 QHWPVFVEV True PC9_epitope_Rep4 1139.5763795860698 1139.5752899358602 84.115 2 0.06729041316608125 0.0038400841662283008 0.019512347430957807 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3'] 98955 5839 SHANSAVVL True PC9_epitope_Rep6 896.47158016436 896.47048993586 30.677 2 0.06728993632945313 0.0038400841662283008 0.0195125478823576 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 109934 14306 TEGEPPFLP True H1975_Epitope_Rep3 985.4756624852898 985.47511496793 60.374 1 0.06728749494638468 0.0038400841662283008 0.019513574214634496 ['ENSG00000241058|ENST00000377304|NSUN6'] 24376 22898 FAADIISVL True PC9_epitope_Rep3 947.53278343859 947.53168993586 93.343 2 0.0672809422783204 0.0038400841662283008 0.01951632913455803 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 11971 10241 DHNSLDSSL True PC9_epitope_Rep3 986.4305031980201 986.42940993586 44.342 2 0.06728035089675838 0.0038400841662283008 0.019516577785078013 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 37518 11039 GVVDPVHGV True PC9_epitope_Rep5 877.46576650793 877.46466993586 47.449 2 0.06727058363687755 0.0038400841662283008 0.019520684919963453 ['ENSG00000261150|ENST00000615648|EPPK1'] 3893 8606 AHAVGNVEL True PC9_epitope_Rep4 908.4715801643599 908.47048993586 40.584 2 0.06726144413408951 0.0038400841662283008 0.019524528803765272 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU'] 29194 14385 FTSATITYL True H1975_Epitope_Rep2 1015.52261267771 1015.52207496793 60.482 1 0.06725905338816103 0.0038400841662283008 0.019525534416539314 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF'] 75227 14754 NIDPITMAY True H1975_Epitope_Rep1 1036.48993265044 1036.48937496793 61.975 1 0.06725321177139003 0.0038400841662283008 0.0195279917601395 ['ENSG00000116285|ENST00000377482|ERRFI1'] 128299 6065 VPPPPPIAR True H1975_Epitope_Rep1 942.56508662638 942.56398993586 28.396 2 0.0672496477878972 0.0038400841662283008 0.01952949113087026 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 104913 17716 SRDDNMFQI True PC9_epitope_Rep3 1124.49205790876 1124.4909699358602 73.341 2 0.06724627418417174 0.0038400841662283008 0.019530910506357038 ['ENSG00000113387|ENST00000265073|SUB1'] 134630 17650 VYSPHVLNL True PC9_epitope_Rep5 1040.5654805492 1040.5643899358602 72.903 2 0.0672429641809787 0.0038400841662283008 0.019532303215540045 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 114582 15150 TQDGNIYQL True PC9_epitope_Rep6 1050.4981888350198 1050.49708993586 70.349 2 0.06723287340745661 0.0038400841662283008 0.019536549550181897 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 90199 2890 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 15.351 2 0.06722642232037748 0.0038400841662283008 0.019539264700776264 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 40406 7783 HQVPAVSSV True PC9_epitope_Rep3 922.4872302285 922.48612993586 34.931 2 0.06722597939674005 0.0038400841662283008 0.01953945113239657 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 111916 18324 TIPEILPKL True PC9_epitope_Rep6 1022.6375828602999 1022.6364899358599 83.126 2 0.06722357490074818 0.0038400841662283008 0.019540463240821267 ['ENSG00000121879|ENST00000263967|PIK3CA'] 41829 20731 IAVNAVLTV True PC9_epitope_Rep1 898.5487678559 898.54766993586 84.569 2 0.06721627642890783 0.0038400841662283008 0.0195435356334709 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 13963 17360 DRDNVGLVL True PC9_epitope_Rep5 999.53490869691 999.53380993586 71.775 2 0.06721491929785854 0.0038400841662283008 0.019544106985603493 ['nc|ENSG00000174606|Q5VTE6-2|ANGEL2', 'ENSG00000174606|ENST00000366962|ANGEL2'] 2337 6738 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 30.832 2 0.067200278937995 0.0038400841662283008 0.01955027155477543 ['ENSG00000172301|ENST00000302362|COPRS'] 8877 19920 AVFPHLTVV True PC9_epitope_Rep3 981.5647522732099 981.56364993586 81.863 2 0.06719115872734838 0.0038400841662283008 0.019554112677600127 ['ENSG00000134825|ENST00000537328|TMEM258'] 35544 12269 GSVDGVIKEV True PC9_epitope_Rep4 1001.5393253710099 1001.53822993586 55.01 2 0.06718648284110335 0.0038400841662283008 0.019556082271481593 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 32110 13100 GETIFVTAP True H1975_Epitope_Rep1 933.48074786573 933.4801949679301 55.479 1 0.06718327525806143 0.0038400841662283008 0.019557433486968367 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 21111 18871 ERADPLFL True PC9_epitope_Rep1 959.5076313199099 959.50652993586 77.372 2 0.06717091105523053 0.0038400841662283008 0.019562642793311522 ['ENSG00000198060|ENST00000358935|MARCHF5'] 115364 17399 TRIWQDVQL True PC9_epitope_Rep6 1157.6193070272097 1157.61820993586 79.54 2 0.06716479187505257 0.0038400841662283008 0.01956522140903349 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 78334 19934 NYISGIQTI True PC9_epitope_Rep5 1007.52876068731 1007.52817496793 81.731 1 0.06716234948376197 0.0038400841662283008 0.019566250717398 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 58091 10477 LEIVNPQAA True H1975_Epitope_Rep2 953.51819600361 953.5176449679301 45.318 1 0.06716131255811107 0.0038400841662283008 0.019566687728894836 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 2530 3811 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 19.752 2 0.06716056677264078 0.0038400841662283008 0.01956700204514922 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 98952 7458 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.47048993586 33.641 2 0.06715195030864082 0.0038400841662283008 0.019570633848481366 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 32061 7688 GESAEVLSA True H1975_Epitope_Rep2 861.40797684829 861.4074249679301 34.524 1 0.06714562841662074 0.0038400841662283008 0.01957329889414449 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 21112 17944 ERADPLFL True PC9_epitope_Rep2 959.5076313199099 959.50652993586 74.326 2 0.06712247370278109 0.0038400841662283008 0.019583062808174904 ['ENSG00000198060|ENST00000358935|MARCHF5'] 48098 21317 IYNGETLVF True PC9_epitope_Rep1 1054.5335117145798 1054.5324099358602 86.824 2 0.06711735263840254 0.0038400841662283008 0.019585222871727235 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 127415 20787 VNEVAILSL True PC9_epitope_Rep3 956.5542471591599 956.55314993586 85.228 2 0.06711156656652828 0.0038400841662283008 0.019587663699222716 ['ENST00000455385.6_1_7:105731299-105731344:-|nuORF'] 49981 8540 KITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1246.62273800457 1246.6216499358602 37.776 2 0.06711066503278362 0.0038400841662283008 0.019588044032256908 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 126465 5027 VLLGETGK True NCI_RA007_Epitope_Rep5 815.47526856247 815.47416993586 26.039 2 0.06710286274464011 0.0038400841662283008 0.019591335893544243 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 137669 13108 YEIPSNLTP True H1975_Epitope_Rep1 1032.51277627 1032.51227496793 55.509 1 0.06710061817726964 0.0038400841662283008 0.019592282992699748 ['ENSG00000069248|ENST00000261396|NUP133'] 32896 18912 GHTDIVLAL True PC9_epitope_Rep1 937.5232813840499 937.52218993586 77.53 2 0.06709504088584367 0.0038400841662283008 0.019594636523160434 ['ENSG00000183751|ENST00000568546|TBL3'] 31858 4710 GELEAVKQA True NCI_RA007_Epitope_Rep3 943.49746055903 943.49636993586 25.473 2 0.0670940648032852 0.0038400841662283008 0.019595048441621934 ['ENST00000514613.5_1_17:49067015-49156972:-|nuORF', 'nc|ENSG00000008294|O60271-5|SPAG9', 'nc|ENSG00000008294|O60271-3|SPAG9', 'nc|ENSG00000008294|O60271-9|SPAG9', 'nc|ENSG00000008294|O60271-4|SPAG9', 'nc|ENSG00000008294|O60271-2|SPAG9', 'ENSG00000008294|ENST00000262013|SPAG9'] 137865 13518 YESSTASALVA True PC9_epitope_Rep1 1097.52406922969 1097.5229699358601 56.853 2 0.0670906110723875 0.0038400841662283008 0.01959650602120002 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 32042 12926 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.49187496793 54.948 1 0.06708309163057438 0.0038400841662283008 0.01959967979983126 ['ENSG00000051523|ENST00000261623|CYBA'] 98742 11617 SGGPVVVL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 49.752 1 0.06708119284325219 0.0038400841662283008 0.019600481307911845 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 38502 6549 HERAIDFSP True NCI_RA007_Epitope_Rep5 1070.5145076055 1070.5134099358602 31.852 2 0.06707252795414696 0.0038400841662283008 0.019604139277376975 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 26918 21070 FLDGNEMTL True PC9_epitope_Rep5 1038.46919720586 1038.46808993586 86.106 2 0.06706685865140712 0.0038400841662283008 0.019606532970290545 ['ENSG00000169504|ENST00000374379|CLIC4'] 86083 9042 QHSTAQLNL True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 39.632 2 0.06706406386661845 0.0038400841662283008 0.01960771308330246 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 97267 8433 SEAEKVYIV True H1975_Epitope_Rep3 1036.5440763982797 1036.54357496793 37.421 1 0.06705376633368355 0.0038400841662283008 0.01961206183676632 ['ENSG00000075914|ENST00000265564|EXOSC7'] 90815 5256 RETEGGTVLTA True H1975_Epitope_Rep2 1132.5724164044398 1132.5713099358602 25.284 2 0.06705147026656166 0.0038400841662283008 0.019613031610457958 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 68756 10280 LTLEKHGGI True PC9_epitope_Rep6 966.5498304850598 966.54872993586 50.231 2 0.06704911120962101 0.0038400841662283008 0.01961402803469802 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 34883 18395 GQLPNLQTV True PC9_epitope_Rep3 968.5290950404801 968.52798993586 75.963 2 0.06704752922976251 0.0038400841662283008 0.0196146962613262 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 35219 11050 GRAPGGLSL True PC9_epitope_Rep5 826.4661008611 826.4650099358599 47.491 2 0.06704419071937268 0.0038400841662283008 0.019616106513391823 ['ENSG00000171223|ENST00000302754|JUNB'] 7979 15691 ATDFDVLSY True H1975_Epitope_Rep2 1029.46549172441 1029.46438993586 65.522 2 0.06700388271128457 0.0038400841662283008 0.019633140773081863 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 90410 12567 REIEELLAEA True NCI_RA007_Epitope_Rep5 1171.6084675599898 1171.60736993586 54.992 2 0.06700206707057689 0.0038400841662283008 0.019633908387572563 ['nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10', 'ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF'] 78088 14697 NVVQSVTSV True PC9_epitope_Rep2 931.49746055903 931.49636993586 61.796 2 0.06699154383834287 0.0038400841662283008 0.019638357931753864 ['ENSG00000173267|ENST00000372017|SNCG', 'ENST00000483064.1_1_10:88719196-88722739:+|nuORF', 'ENST00000465679.5_1_10:88718421-88722579:+|nuORF'] 30447 9703 GAFGKPSSL True PC9_epitope_Rep1 862.45486747106 862.45376993586 42.18 2 0.06699072608478379 0.0038400841662283008 0.019638703741818538 ['ENSG00000099812|ENST00000215582|MISP'] 106913 7422 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4499749679298 33.552 1 0.066973528748303 0.0038400841662283008 0.019645977417321114 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 33357 6389 GKTVISQSL True NCI_RA007_Epitope_Rep3 931.5338460677499 931.53274993586 32.134 2 0.06697279601795723 0.0038400841662283008 0.019646287383341225 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 13966 7681 DRDPASGTAL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 34.368 2 0.0669632209922512 0.0038400841662283008 0.019650338308553898 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 101495 19031 SLLDKIIGA True PC9_epitope_Rep6 928.5593325396 928.55878496793 85.845 1 0.0669626306032665 0.0038400841662283008 0.019650588110763784 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 111197 13704 THISDTSVVL True PC9_epitope_Rep1 1070.56078909158 1070.5596899358602 57.563 2 0.06695912583090163 0.0038400841662283008 0.01965207109137173 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 111238 18130 THIYDMSTVM True PC9_epitope_Rep1 1196.52058115572 1196.51948993586 74.528 2 0.0669573082749313 0.0038400841662283008 0.019652840197651872 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 9449 9679 AVVGAIKNV True PC9_epitope_Rep5 869.5334521449299 869.53234993586 42.199 2 0.06694896404747337 0.0038400841662283008 0.01965637144741006 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 750 15300 AAVPGKTFVNI True PC9_epitope_Rep2 1115.63389446219 1115.63278993586 64.133 2 0.06693347037259395 0.0038400841662283008 0.01966292986910201 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 119667 11057 VAVEPGAAV True PC9_epitope_Rep2 811.4439684341899 811.44286993586 47.849 2 0.06693177058134199 0.0038400841662283008 0.019663649507758937 ['ENSG00000171421|ENST00000505059|MRPL36'] 6063 7986 APLLQPRAA True PC9_epitope_Rep2 935.5552502186699 935.55414993586 36.081 2 0.06692959119157309 0.0038400841662283008 0.019664572228955457 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 132227 16471 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 71.328 2 0.06692019398115924 0.0038400841662283008 0.01966855132445972 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 30480 10594 GAGAPVYL True H1975_Epitope_Rep2 746.3962899657799 746.39574496793 45.772 1 0.06691749795757908 0.0038400841662283008 0.019669693048489527 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 2529 3729 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 19.412 2 0.06691697190720042 0.0038400841662283008 0.019669915829751205 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 70421 11810 LVTTVTEIAG True NCI_RA007_Epitope_Rep2 1002.5597264624199 1002.5591749679301 50.538 1 0.06691359440526808 0.0038400841662283008 0.01967134625025521 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 1420 8624 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 38.129 2 0.06691270712284372 0.0038400841662283008 0.019671722042966855 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 86477 6225 QKSLSLSPG True NCI_RA007_Epitope_Rep2 915.5025459394699 915.50144993586 28.82 2 0.06690182820688283 0.0038400841662283008 0.019676330151839675 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 87846 14836 QRGPPIIL True PC9_epitope_Rep5 892.5494365622399 892.54832993586 62.068 2 0.06690131507357552 0.0038400841662283008 0.019676547530214757 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 86481 5883 QKSLSLSPG True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50144993586 29.252 2 0.06689624287886982 0.0038400841662283008 0.019678696380133635 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 117644 13870 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.50618993586 58.191 2 0.06689416303202522 0.0038400841662283008 0.01967957757569379 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 138621 14435 YIDSSINNV True PC9_epitope_Rep5 1023.4872897981501 1023.4861899358599 60.524 2 0.06689188393681528 0.0038400841662283008 0.019680543231087047 ['ENSG00000115977|ENST00000409085|AAK1', 'nc|ENSG00000115977|Q2M2I8-2|AAK1', 'ENST00000495836.1_1_2:69771529-69870271:-|nuORF'] 102992 16972 SPFGTITSA True PC9_epitope_Rep1 879.43379767331 879.43324496793 70.106 1 0.06689184066076044 0.0038400841662283008 0.01968056156762569 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 73328 9563 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4684899358601 41.709 2 0.06689090887695917 0.0038400841662283008 0.019680956378446888 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 21416 16246 ERIPDVAAL True PC9_epitope_Rep2 982.5447451046199 982.54364993586 67.734 2 0.0668865917442905 0.0038400841662283008 0.019682785707674944 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 13982 15276 DRDPEFYKF True PC9_epitope_Rep1 1215.5560380643099 1215.55438490379 63.58 3 0.0668772795561914 0.0038400841662283008 0.019686732160052164 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 64887 11427 LQEDPPAGV True PC9_epitope_Rep1 924.4552613938798 924.45416993586 48.832 2 0.06687619548872854 0.0038400841662283008 0.01968719162900515 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 6301 6968 APRLQSEVA True PC9_epitope_Rep1 969.5243440132099 969.52324993586 31.607 2 0.06687529584849895 0.0038400841662283008 0.01968757293818827 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 76410 9772 NQDKETLTL True PC9_epitope_Rep2 1060.540053647 1060.53894993586 42.927 2 0.06686790374466228 0.0038400841662283008 0.019690706311460242 ['ENSG00000165506|ENST00000298292|DNAAF2', 'nc|ENSG00000165506|Q9NVR5-2|DNAAF2'] 41413 18208 HYGLPVVV True PC9_epitope_Rep5 882.49633836022 882.49524993586 75.049 2 0.06685429314299818 0.0038400841662283008 0.01969647678921178 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 41442 18817 HYILHNSFF True PC9_epitope_Rep5 1176.5716285587998 1176.56998490379 77.392 3 0.0668540322738392 0.0038400841662283008 0.01969658740493638 ['ENSG00000163659|ENST00000295924|TIPARP'] 74788 10559 NHDTALTL True PC9_epitope_Rep3 883.43994568291 883.43884993586 45.562 2 0.06684830937320123 0.0038400841662283008 0.019699014216648384 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 98337 11094 SEYEMSIAA True H1975_Epitope_Rep1 999.4219126602699 999.4213749679301 47.637 1 0.06684128641330786 0.0038400841662283008 0.019701992698132248 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 90175 3644 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 18.444 2 0.06684041579562534 0.0038400841662283008 0.019702361961445012 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 30140 23624 FYPALADLF True PC9_epitope_Rep2 1055.5327834385898 1055.5316899358602 96.34 2 0.06683858365292193 0.0038400841662283008 0.019703139066266973 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 90954 5942 REYQVKLQA True NCI_RA007_Epitope_Rep4 1133.61930702721 1133.61766490379 29.475 3 0.06683304928959204 0.0038400841662283008 0.019705486642301904 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 84991 15009 QEFPSILA True H1975_Epitope_Rep2 903.4701831820298 903.46963496793 62.882 1 0.06683094337325118 0.0038400841662283008 0.01970638000123782 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'ENST00000525306.1_1_11:103152943-103158366:+|nuORF'] 140264 18068 YRAPELML True PC9_epitope_Rep5 991.5160878286299 991.51498993586 74.513 2 0.06682369521027928 0.0038400841662283008 0.01970945505749395 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 26455 16278 FIDDANYSV True PC9_epitope_Rep6 1042.4607406971402 1042.46017496793 74.974 1 0.06681727009312557 0.0038400841662283008 0.019712181303182582 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 102388 9948 SLTGHISTV True PC9_epitope_Rep5 913.4868958753301 913.48578993586 43.238 2 0.06681434137620669 0.0038400841662283008 0.019713424104137383 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 108649 14782 SYPSAFSKL True PC9_epitope_Rep2 998.50729696674 998.50618993586 62.122 2 0.0668112972241436 0.0038400841662283008 0.019714715966425832 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 133628 17768 VYAFNLDTF True NCI_RA007_Epitope_Rep4 1088.5178616504397 1088.51676993586 76.918 2 0.06680983177290158 0.0038400841662283008 0.019715337895201916 ['ENST00000562913.5_1_16:87744798-87760508:-|nuORF', 'ENST00000566349.5_1_16:87741959-87776602:-|nuORF', 'nc|ENSG00000104731|Q8TBB5-2|KLHDC4', 'nc|ENSG00000104731|Q8TBB5-3|KLHDC4', 'ENSG00000104731|ENST00000270583|KLHDC4'] 115484 8498 TRNPVSEEL True PC9_epitope_Rep4 1043.52473793603 1043.52364993586 40.161 2 0.06680329130417595 0.0038400841662283008 0.019718113851299894 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 23759 21558 EYGNIIVTL True PC9_epitope_Rep2 1020.54916177872 1020.54806993586 88.392 2 0.06680182512061814 0.0038400841662283008 0.019718736189570818 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 121381 6251 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51731496793 28.999 1 0.0668015182847724 0.0038400841662283008 0.019718866431819398 ['ENSG00000102316|ENST00000375068|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 54035 14622 KVIDEIYRV True PC9_epitope_Rep3 1133.64445914589 1133.6433699358602 61.372 2 0.06679838136177796 0.0038400841662283008 0.019720198003235257 ['ENSG00000143756|ENST00000366862|FBXO28'] 64870 15543 LQDTSLQQL True PC9_epitope_Rep4 1044.54513902744 1044.5440499358601 67.71 2 0.06677489748267577 0.0038400841662283008 0.01973016914663808 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 138855 13004 YKDGTELEL True PC9_epitope_Rep2 1066.51825557326 1066.51767496793 55.306 1 0.06677456925823366 0.0038400841662283008 0.01973030854204767 ['ENSG00000143815|ENST00000272163|LBR'] 114948 21729 TQVAIVNIL True PC9_epitope_Rep3 969.58588164061 969.58478993586 88.875 2 0.06676360320082424 0.0038400841662283008 0.019734966297163863 ['ENSG00000115084|ENST00000245680|SLC35F5'] 73421 23529 MTVDDLLSL True PC9_epitope_Rep1 1005.5052483614099 1005.5046749679301 95.293 1 0.06675191160978876 0.0038400841662283008 0.019739933332058292 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 31515 12611 GEDFAIVA True H1975_Epitope_Rep3 820.3966838885999 820.39613496793 53.713 1 0.06674912652511673 0.0038400841662283008 0.019741116712168154 ['ENSG00000008018|ENST00000262193|PSMB1'] 96601 7486 SAGPAIKL True H1975_Epitope_Rep2 755.45413919507 755.45304993586 33.743 2 0.06674481274690235 0.0038400841662283008 0.01974294976173439 ['ENSG00000166897|ENST00000402918|ELFN2'] 96337 12286 RYSSMAASF True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 52.246 2 0.06674375447790938 0.0038400841662283008 0.019743399474870065 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 115021 8063 TRATEGMVVA True PC9_epitope_Rep1 1033.5226297610498 1033.5215299358601 35.838 2 0.0667419267024293 0.0038400841662283008 0.019744176213243987 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 11944 9905 DHMVSPTAV True PC9_epitope_Rep1 955.44331681119 955.44220993586 42.957 2 0.06673812791891291 0.0038400841662283008 0.019745790648599024 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10'] 11809 5370 DHFASVHSV True PC9_epitope_Rep6 997.46174375665 997.46064993586 28.52 2 0.06673676618317627 0.0038400841662283008 0.019746369398787347 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 90107 6734 REAQSFISA True NCI_RA007_Epitope_Rep3 1007.5036085686298 1007.50250993586 33.577 2 0.06673078422803573 0.0038400841662283008 0.019748911969543183 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 17498 7197 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.53465490379 32.649 3 0.06672982263034444 0.0038400841662283008 0.019749320715218923 ['ENSG00000162378|ENST00000294353|ZYG11B'] 100836 20114 SLELNVIVTV True PC9_epitope_Rep4 1085.63322575585 1085.6321299358601 85.503 2 0.06672700504624232 0.0038400841662283008 0.019750518428599047 ['ENSG00000156886|ENST00000389202|ITGAD'] 137846 11478 YESEWTNEV True H1975_Epitope_Rep1 1155.47203365683 1155.47092993586 49.134 2 0.06670594398323963 0.0038400841662283008 0.019759473292717194 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 106375 22449 STIANVWLV True PC9_epitope_Rep5 1001.55458151233 1001.55348993586 91.35 2 0.0667013811204053 0.0038400841662283008 0.019761413849355418 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 79242 5924 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 30.28 2 0.0666918787532539 0.0038400841662283008 0.0197654557087706 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 41182 21446 HVIDLDDATFL True PC9_epitope_Rep1 1257.62411762413 1257.6230299358601 87.33 2 0.06668457906119332 0.0038400841662283008 0.019768561170573393 ['ENSG00000152219|ENST00000282032|ARL14EP'] 44470 21766 ILLAEVPTM True PC9_epitope_Rep1 985.55180463101 985.55070993586 88.556 2 0.06666685406853334 0.0038400841662283008 0.01977610367076123 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF'] 130650 10296 VSTEVDARL True PC9_epitope_Rep1 988.5189242795998 988.51782993586 44.489 2 0.06666322435045353 0.0038400841662283008 0.01977764854803824 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 58912 10700 LETGEVIPP True H1975_Epitope_Rep2 953.50696261357 953.50641496793 46.183 1 0.06664952557711656 0.0038400841662283008 0.01978348000779549 ['nc|ENSG00000165264|O95139-2|NDUFB6', 'ENSG00000165264|ENST00000379847|NDUFB6'] 1940 10307 AEINATMSV True H1975_Epitope_Rep2 934.4429824580201 934.44243496793 44.652 1 0.06664536101483845 0.0038400841662283008 0.019785253142671884 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 98976 9259 SHDDGNIDL True PC9_epitope_Rep3 984.41485313388 984.41374993586 40.56 2 0.06661321207805393 0.0038400841662283008 0.019798946034153025 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 103860 7236 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 35.137 2 0.0666097748475391 0.0038400841662283008 0.019800410536939976 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 120370 2818 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 14.908 2 0.06660882467120556 0.0038400841662283008 0.019800815396701796 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 24803 6651 FATHAAALSVR True PC9_epitope_Rep6 1142.6196413803798 1142.61799490379 34.32 3 0.06658563277744861 0.0038400841662283008 0.019810699571388635 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 87661 12287 QQSEVTRIL True PC9_epitope_Rep5 1072.58767254576 1072.58656993586 52.25 2 0.06658558888143062 0.0038400841662283008 0.019810718283776528 ['ENSG00000142669|ENST00000270792|SH3BGRL3'] 76049 12272 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40507496793 52.289 1 0.06658532939790314 0.0038400841662283008 0.019810828899071955 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 76524 18226 NQINGSFAL True PC9_epitope_Rep4 962.48214484806 962.48104993586 78.177 2 0.06658365778849812 0.0038400841662283008 0.01981154150346918 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 64988 11088 LQHEGIFRV True PC9_epitope_Rep2 1097.5981776598098 1097.5970899358601 47.976 2 0.06658183307005217 0.0038400841662283008 0.01981231940492541 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ENST00000494397.5_1_X:153175958-153178171:-|nuORF', 'ENST00000470209.5_1_X:153173185-153178999:-|nuORF', 'ENST00000404127.6_1_X:153173185-153186849:-|nuORF', 'ENSG00000266028|ENST00000573034|SRGAP2'] 111261 7662 THLGGQPTL True PC9_epitope_Rep4 922.4872302284999 922.48612993586 36.854 2 0.06656736172208286 0.0038400841662283008 0.01981848972599916 ['nc|ENSG00000110422|Q9H422-2|HIPK3', 'ENSG00000110422|ENST00000303296|HIPK3'] 25542 20250 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54788496793 84.239 1 0.06656122985448851 0.0038400841662283008 0.019821104776682884 ['ENSG00000125356|ENST00000371437|NDUFA1'] 69663 7763 LVDSNNPKI True PC9_epitope_Rep5 998.53965972418 998.53856993586 34.804 2 0.06654970559289593 0.0038660810562028245 0.01982602037453606 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 40085 11050 HPVLLTEA True PC9_epitope_Rep1 878.4861675993401 878.48561496793 47.392 1 0.06654955740409609 0.0038660810562028245 0.01982608359079499 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 4325 21466 AIISELVSI True PC9_epitope_Rep4 943.5589981864299 943.55790993586 90.758 2 0.06654483039132841 0.0038660810562028245 0.01982810019719664 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 90756 3547 RERRDNYVP True NCI_RA007_Epitope_Rep4 1203.6108676018298 1203.60922490379 19.657 3 0.0665420153305425 0.0038860443744256267 0.019829301229149332 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 31977 4902 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 23.939 2 0.06653886732353784 0.0038860443744256267 0.019830644390249726 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 29861 12914 FVTFDDHD True PC9_epitope_Rep1 994.40322582102 994.40212993586 54.547 2 0.06652457662978717 0.0038860443744256267 0.019836742857332744 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 80376 8572 PGHLQEGFG True PC9_epitope_Rep1 940.4402800360799 940.43918993586 37.809 2 0.06652027328936996 0.0038860443744256267 0.01983857961977883 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 127668 10511 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 45.32 2 0.06651746767252231 0.0038860443744256267 0.019839777204381785 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 115051 8786 TRDAPLAV True PC9_epitope_Rep3 841.4657665079299 841.46466993586 38.747 2 0.06651128501641333 0.0038860443744256267 0.019842416521441204 ['ENSG00000101407|ENST00000373447|TTI1'] 40462 6452 HRDERVLSL True PC9_epitope_Rep6 1123.60980497267 1123.60816490379 33.449 3 0.06651062069993786 0.0038860443744256267 0.01984270013103931 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 31468 5055 GEAPPSAPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 24.516 2 0.06651006776887348 0.0038860443744256267 0.019842936190886916 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 76140 10669 NMVAKVDEV True PC9_epitope_Rep5 1003.5008316873099 1003.49972993586 46.027 2 0.0665008798672801 0.0038860443744256267 0.019846859109808136 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 96658 10670 SAIQSISHV True PC9_epitope_Rep3 940.4977949122 940.49668993586 45.988 2 0.06649774814531405 0.0038860443744256267 0.019848196410722156 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 47896 8109 IYIKHPHLF True NCI_RA007_Epitope_Rep5 1166.66004964038 1166.6584049037901 37.878 3 0.06647261490143803 0.0038860443744256267 0.019858931754654134 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 63554 12622 LM[Oxidation]DHTIPEV True PC9_epitope_Rep3 1069.51139675145 1069.51028993586 53.573 2 0.06647238649461291 0.0038860443744256267 0.019859029340196288 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 31074 16775 GATSLVTLL True H1975_Epitope_Rep3 873.51713337445 873.51658496793 70.071 1 0.066463758040636 0.0038860443744256267 0.019862716122122603 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 7229 8653 ARDDTHYLL True PC9_epitope_Rep6 1102.54072235334 1102.5396299358601 43.112 2 0.06645131290671306 0.0038860443744256267 0.019868034811092714 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 24421 17554 FADFDGVLY True H1975_Epitope_Rep2 1045.4756624852898 1045.47507496793 72.831 1 0.06642765594072246 0.0038860443744256267 0.01987814872369348 ['ENSG00000163466|ENST00000315717|ARPC2', 'ENST00000489598.5_1_2:219082193-219099125:+|nuORF', 'ENST00000491780.5_1_2:219082193-219100082:+|nuORF', 'ENST00000465395.5_1_2:219082193-219103574:+|nuORF'] 41405 18416 HYGLPVVV True PC9_epitope_Rep1 882.49633836022 882.49578496793 75.627 1 0.06642646803805692 0.0038860443744256267 0.01987865670502962 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 131946 19275 VTRWDLSL True PC9_epitope_Rep2 988.5341804209199 988.53308993586 79.514 2 0.06639148629990026 0.0038860443744256267 0.01989362125615799 ['ENST00000377524.7_1_10:17746478-17747618:+|nuORF'] 41998 23910 IDFPGGILSF True PC9_epitope_Rep1 1064.55424715916 1064.5531499358601 96.773 2 0.06637162542301178 0.0038860443744256267 0.019902121988428542 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 26515 19654 FIFSDTHEL True PC9_epitope_Rep3 1107.52367530687 1107.52256993586 80.834 2 0.06637128867804402 0.0038860443744256267 0.01990226614876872 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 17710 7349 EHNIFHNEV True PC9_epitope_Rep4 1137.5203212619301 1137.51868490379 35.6 3 0.06636507818938495 0.0038860443744256267 0.01990492502782466 ['ENSG00000118898|ENST00000345988|PPL'] 115688 17332 TSAESFVNV True PC9_epitope_Rep5 952.45017601344 952.44962496793 71.667 1 0.06636116014315216 0.0038860443744256267 0.019906602618007686 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 139903 22372 YPVDNEILL True PC9_epitope_Rep5 1074.55972646242 1074.5586299358602 91.065 2 0.06636015571587765 0.0038860443744256267 0.019907032704657848 ['ENST00000429404.1_1_10:60897597-60897936:-|nuORF'] 115120 10895 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 47.225 2 0.06635583231887753 0.0038860443744256267 0.019908884041606224 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 122142 11617 VGAGAPVYLAA True H1975_Epitope_Rep1 987.5389314481899 987.53838496793 49.674 1 0.06635406480343349 0.0038860443744256267 0.019909640961175087 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 116753 17170 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54427496793 71.495 1 0.06635189880399803 0.0038860443744256267 0.019910568563336655 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 117955 7605 TYAEKLHRL True PC9_epitope_Rep3 1129.62439240765 1129.6227449037901 34.25 3 0.06634407593061327 0.0038860443744256267 0.019913919086479576 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 1288 5356 AEDPGPAVA True H1975_Epitope_Rep2 825.38684748089 825.3862949679301 25.647 1 0.06634225252963603 0.0038860443744256267 0.019914700120478065 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 137636 4912 YEHFNSPHP True H1975_Epitope_Rep3 1126.4832074772198 1126.48156490379 24.021 3 0.06633659775258985 0.0038860443744256267 0.019917122461949162 ['ENST00000521970.1_1_5:133473560-133474730:+|nuORF', 'nc|ENSG00000081059|P36402-10|TCF7', 'nc|ENSG00000081059|P36402-11|TCF7', 'ENSG00000081059|ENST00000342854|TCF7', 'nc|ENSG00000081059|P36402|TCF7', 'nc|ENSG00000081059|P36402-7|TCF7', 'nc|ENSG00000081059|P36402-4|TCF7', 'nc|ENSG00000081059|P36402-12|TCF7', 'nc|ENSG00000081059|P36402-15|TCF7', 'nc|ENSG00000081059|P36402-13|TCF7', 'nc|ENSG00000081059|P36402-9|TCF7', 'nc|ENSG00000081059|P36402-2|TCF7', 'nc|ENSG00000081059|P36402-6|TCF7', 'nc|ENSG00000081059|P36402-8|TCF7', 'ENST00000522653.5_1_5:133451068-133478640:+|nuORF', 'nc|ENSG00000081059|P36402-16|TCF7', 'nc|ENSG00000081059|P36402-14|TCF7', 'nc|ENSG00000081059|P36402-3|TCF7'] 2818 7537 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.3740149679301 33.942 1 0.06633563901412472 0.0038860443744256267 0.019917533184394653 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 42434 2759 IEDSPTKRLP True H1975_Epitope_Rep2 1154.62953735774 1154.62789490379 14.64 3 0.0663235438394591 0.0038860443744256267 0.019922715412209326 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF'] 1186 12923 AEASMVIAV True H1975_Epitope_Rep2 889.45790424617 889.4573549679301 54.822 1 0.06629412436175161 0.0038860443744256267 0.019935325486026587 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'ENST00000545930.5_1_11:61091835-61095006:-|nuORF'] 27982 18317 FQIPPNAEL True PC9_epitope_Rep6 1027.53384606775 1027.53274993586 83.098 2 0.06628838264130715 0.0038860443744256267 0.019937787416140336 ['ENST00000597277.1_9:43426178-43426727:-|nuORF', 'ENSG00000004478|ENST00000001008|FKBP4'] 104082 11246 SQDSTAVAL True PC9_epitope_Rep2 890.4345259492999 890.43342993586 48.584 2 0.0662795522672344 0.0038860443744256267 0.019941574242233116 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 134374 15347 VYPERTPLL True PC9_epitope_Rep3 1086.60734536118 1086.6062499358602 64.188 2 0.06626774827497604 0.0038860443744256267 0.019946637310586098 ['ENST00000475235.1_1_6:32782088-32784728:-|nuORF', 'ENSG00000241106|ENST00000438763|HLA-DOB'] 16107 6511 EEAGAELQA True H1975_Epitope_Rep2 916.4137905047199 916.41324496793 29.962 1 0.06625747481301217 0.0038860443744256267 0.0199510448530032 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 69583 16530 LVDLAPLGY True H1975_Epitope_Rep2 959.5327834385898 959.5322349679301 68.807 1 0.06624860345402375 0.0038860443744256267 0.0199548515827779 ['nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 76002 23675 NLVSFLETV True PC9_epitope_Rep1 1020.54916177872 1020.54806993586 95.857 2 0.06624622562246264 0.0038860443744256267 0.019955872031737744 ['ENSG00000128791|ENST00000262120|TWSG1'] 93093 8771 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 38.578 2 0.0662436334038234 0.0038860443744256267 0.01995698453981014 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 21217 5344 ERDPGGITA True PC9_epitope_Rep3 914.4457593393399 914.44466993586 25.633 2 0.06623553129046528 0.0038860443744256267 0.019960462108995245 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 140907 13988 YSEGESLFY True H1975_Epitope_Rep1 1093.46040634397 1093.4598749679299 58.963 1 0.06622751011760163 0.0038860443744256267 0.01996390548597335 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 70203 14108 LVQGELVTA True PC9_epitope_Rep2 928.5229470308799 928.52184993586 59.54 2 0.06622453677233782 0.0038860443744256267 0.01996518204013548 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1'] 22362 10518 ETEDVNLAY True H1975_Epitope_Rep1 1052.4662200004 1052.46567496793 45.409 1 0.06622015468453085 0.0038860443744256267 0.01996706355026897 ['ENSG00000153767|ENST00000283875|GTF2E1'] 71987 6072 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 28.333 1 0.06621027109042825 0.0038860443744256267 0.0199713078069433 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 33382 19309 GLAAGGIVAV True PC9_epitope_Rep3 826.4912529797799 826.49070496793 79.494 1 0.06619229736735587 0.0038860443744256267 0.019979028288538894 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 142544 20748 YYLGNPAEF True PC9_epitope_Rep5 1072.48656152216 1072.48597496793 84.865 1 0.06617960955908136 0.0038860443744256267 0.019984479896183283 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 86298 15889 QISDTSVVL True PC9_epitope_Rep6 960.51277627 960.51166993586 73.395 2 0.06617385811584627 0.0038860443744256267 0.019986951586087504 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 48300 10020 IYQRHVYNL True PC9_epitope_Rep1 1204.6352914445197 1204.6336349037902 43.408 3 0.06617238086398633 0.0038860443744256267 0.019987586482282414 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 9689 21315 AYGGAFYAF True PC9_epitope_Rep2 965.42831837005 965.4272299358599 87.452 2 0.06616978380853497 0.0038860443744256267 0.019988702694810064 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 101481 18764 SLLDDLHSA True PC9_epitope_Rep5 969.47672511445 969.47562993586 77.186 2 0.066166977439044 0.0038860443744256267 0.019989908934784924 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 8935 13784 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6971299358602 58.039 2 0.06616195678823904 0.0038860443744256267 0.01999206708904537 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 118123 9692 TYIEASGKSL True PC9_epitope_Rep2 1067.54989005471 1067.5487899358602 42.621 2 0.06615827750711886 0.0038860443744256267 0.019993648784209877 ['ENSG00000102575|ENST00000648477|ACP5', 'ENST00000590420.1_1_19:11685827-11688432:-|nuORF'] 54692 16559 KYLTVKDYL True PC9_epitope_Rep5 1141.6383111362898 1141.63720993586 68.698 2 0.06614816179292539 0.0038860443744256267 0.019997998046354448 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 88370 20546 QSLAGGIIGV True PC9_epitope_Rep5 913.5232813840499 913.5227349679301 84.074 1 0.0661437466691232 0.0038860443744256267 0.019999896606220823 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 8632 17297 AVAAVLTQV True PC9_epitope_Rep4 870.5174677276199 870.51636993586 74.536 2 0.06613634859888284 0.0038860443744256267 0.020003078242791517 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 106767 15790 SVAAQLTGV True PC9_epitope_Rep3 844.4654321547599 844.46432993586 65.892 2 0.06612747807194196 0.0038860443744256267 0.020006893742033866 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 118384 18400 TYNYPVHYF True PC9_epitope_Rep3 1202.53965972418 1202.53856993586 75.983 2 0.066124060810265 0.0038860443744256267 0.020008363794828787 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 104827 16373 SRAGLQFPV True PC9_epitope_Rep1 973.53451477409 973.53340993586 67.801 2 0.06611956628139234 0.0038860443744256267 0.02001029742240246 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 58911 10589 LETGEVIPP True H1975_Epitope_Rep2 953.50696261357 953.50641496793 45.754 1 0.06611087127658569 0.0038860443744256267 0.0200140386583207 ['nc|ENSG00000165264|O95139-2|NDUFB6', 'ENSG00000165264|ENST00000379847|NDUFB6'] 130887 10983 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.43236993586 47.272 2 0.06610489204724611 0.0038860443744256267 0.020016611739356267 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 107322 14788 SVLEPPLFLK True NCI_RA007_Epitope_Rep4 1141.6746966450098 1141.67358993586 64.343 2 0.06609026669285131 0.0038860443744256267 0.020022906845930936 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 107464 19333 SVLVSVSEV True PC9_epitope_Rep5 917.50696261357 917.50586993586 79.408 2 0.0660867857152797 0.0038860443744256267 0.020024405411059713 ['ENSG00000221926|ENST00000649191|TRIM16'] 76946 5248 NRDRTQIAL True PC9_epitope_Rep6 1085.59415490853 1085.59304993586 27.972 2 0.06608635287365838 0.0038860443744256267 0.020024591757117596 ['ENSG00000241685|ENST00000262942|ARPC1A'] 35778 14795 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 62.172 2 0.06607068380829365 0.003906557248105713 0.020031338643446053 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 97704 11001 SEIDQVVPAA True H1975_Epitope_Rep2 1027.5185899264297 1027.51807496793 47.342 1 0.0660706505419352 0.003906557248105713 0.020031352969710065 ['ENSG00000162607|ENST00000339950|USP1'] 141481 18122 YTIPDEYRI True PC9_epitope_Rep2 1168.57643915572 1168.57534993586 75.008 2 0.0660631398611122 0.003906557248105713 0.020034587709640245 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF'] 18830 8774 ELDPDNETY True H1975_Epitope_Rep2 1094.44039917538 1094.4398749679299 38.713 1 0.06606027583735874 0.003906557248105713 0.020035821329070277 ['ENSG00000104969|ENST00000221566|SGTA'] 22057 15190 ESLQEEIAFLK True NCI_RA007_Epitope_Rep1 1305.6816325002499 1305.68052993586 63.156 2 0.06605531332929873 0.003906557248105713 0.020037958992844225 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 90206 3356 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 17.709 2 0.06605132872989354 0.003906557248105713 0.02003967556171745 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 105767 3737 SSGPSTPLK True NCI_RA007_Epitope_Rep4 872.46034677432 872.45924993586 20.521 2 0.06603246439275413 0.003906557248105713 0.020047804169499056 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5'] 25294 11477 FDQAFGLPR True NCI_RA007_Epitope_Rep2 1049.5294293936497 1049.52832993586 49.236 2 0.06602910795715566 0.003906557248105713 0.020049250768918503 ['ENSG00000106211|ENST00000248553|HSPB1'] 68622 22813 LTIDDGIFEV True PC9_epitope_Rep3 1120.56520576568 1120.56467496793 93.021 1 0.06602644906312773 0.003906557248105713 0.020050396801086334 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 142855 15127 YYTDIM[Oxidation]HTL True PC9_epitope_Rep3 1171.5219614351497 1171.5208699358602 63.325 2 0.06602350954429165 0.003906557248105713 0.020051663857784743 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 138723 19947 YIPTELDQV True PC9_epitope_Rep3 1076.53899101784 1076.5378899358602 81.969 2 0.06601654537301896 0.003906557248105713 0.0200546660033128 ['ENSG00000149100|ENST00000531120|EIF3M'] 24705 21643 FAMEIDPSL True PC9_epitope_Rep3 1021.4790336135699 1021.47792993586 88.548 2 0.06601625962044876 0.003906557248105713 0.020054789195609067 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 7745 10089 ASQDIIPQLK True NCI_RA007_Epitope_Rep4 1111.62372370131 1111.62262993586 45.657 2 0.06600380798917822 0.003906557248105713 0.02006015795956484 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 110350 7580 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 34.149 2 0.06599447237121862 0.003906557248105713 0.02006418406004606 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 31622 12090 GEFGDLNAV True NCI_RA007_Epitope_Rep3 920.4239612655999 920.4234149679301 54.675 1 0.06597487639478741 0.003906557248105713 0.020072637482591305 ['ENSG00000080298|ENST00000617270|RFX3'] 103935 17055 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51234993586 70.854 2 0.06597369039032121 0.003906557248105713 0.020073149212913356 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 65009 8527 LQIDNARLA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 39.483 2 0.06595821112684143 0.003906557248105713 0.020079829215287608 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 77562 9198 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46637496793 40.334 1 0.06595734662855181 0.003906557248105713 0.0200802023456379 ['ENSG00000204019|ENST00000371894|CT83'] 11749 11282 DHATTALL True PC9_epitope_Rep3 840.43413202648 840.43302993586 48.404 2 0.06595485912828535 0.003906557248105713 0.020081276023387877 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 129178 18266 VQSGLRILL True PC9_epitope_Rep4 997.6284151589299 997.62730993586 78.33 2 0.06595266424119829 0.003906557248105713 0.020082223444564368 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 77204 8382 NRSNTVVIM True PC9_epitope_Rep6 1032.53861417836 1032.53750993586 41.906 2 0.06594239357808149 0.003906557248105713 0.020086657313633197 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 6901 14449 AQIEVVPSA True PC9_epitope_Rep2 912.4916469025999 912.49109496793 60.848 1 0.06593642312976852 0.003906557248105713 0.020089235183515023 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 77246 8482 NRYDGIYKV True PC9_epitope_Rep4 1126.5771078620598 1126.5760099358602 40.098 2 0.06592822105922282 0.003906557248105713 0.020092777100229303 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 40242 19468 HQILTPFLL True PC9_epitope_Rep6 1080.6331661862 1080.63206993586 87.547 2 0.06590551083335557 0.003906557248105713 0.020102587097754327 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 104283 17228 SQIHDIVLV True PC9_epitope_Rep5 1022.5760452328999 1022.5754749679301 71.285 1 0.06590244925727247 0.003906557248105713 0.020103909924721046 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 82656 19652 PQPDVFPLF True NCI_RA007_Epitope_Rep5 1058.54368247546 1058.5425899358602 82.506 2 0.06589337545583882 0.003906557248105713 0.02010783094695438 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 21421 15630 ERIPDVAAL True PC9_epitope_Rep4 982.5447451046199 982.54364993586 68.044 2 0.0658902888361235 0.003906557248105713 0.02010916491465957 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 95055 9598 RTSTGIIGV True PC9_epitope_Rep4 902.5185303567799 902.51742993586 44.544 2 0.06587793303742076 0.003906557248105713 0.020114505627733613 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 95059 9053 RTSTGIIGV True PC9_epitope_Rep6 902.5185303567799 902.51742993586 44.879 2 0.06587560021636361 0.003906557248105713 0.020115514120633674 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 4165 13549 AHTPVIISV True PC9_epitope_Rep4 935.54401682863 935.54290993586 60.011 2 0.06587450519000976 0.003906557248105713 0.02011598752329042 ['ENSG00000182993|ENST00000330828|C12orf60'] 96428 18306 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41156993586 75.62 2 0.06586075990684907 0.003906557248105713 0.02012193076587485 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 4180 8400 AHVQNGIAL True PC9_epitope_Rep4 921.5032146458099 921.50210993586 39.773 2 0.06584927181866503 0.003906557248105713 0.02012689927098835 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 4156 10896 AHTEMPTTL True PC9_epitope_Rep5 999.46953155903 999.46842993586 46.899 2 0.06584848595411706 0.003906557248105713 0.020127239192236582 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 108663 13393 SYQKVIELF True NCI_RA007_Epitope_Rep3 1125.6070110080097 1125.6059099358602 59.957 2 0.06582842016676314 0.003906557248105713 0.020135920321873016 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 14181 14187 DSDSDQLFY True H1975_Epitope_Rep3 1088.42983449168 1088.42927496793 59.906 1 0.06582409437883747 0.003906557248105713 0.020137792252941804 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 1552 13392 AEEQPPFGVYA True H1975_Epitope_Rep2 1206.5557037111398 1206.55460993586 56.646 2 0.06581785916509758 0.003906557248105713 0.020140490745716902 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2', 'ENST00000483432.1_1_9:140070142-140074912:-|nuORF'] 24674 20577 FALPGLLHA True PC9_epitope_Rep2 937.5385375253701 937.53798496793 84.581 1 0.06581641426896402 0.003906557248105713 0.020141116119217754 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 24127 23832 EYPFILDAF True PC9_epitope_Rep2 1113.5382627418498 1113.5371699358602 97.141 2 0.0658137268062202 0.003906557248105713 0.020142279342315966 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 86313 8756 QITQINHGL True PC9_epitope_Rep4 1022.5508931142199 1022.5497899358601 41.188 2 0.06580338372768069 0.003906557248105713 0.020146756746090705 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 29325 15838 FVDEPLIHATT True PC9_epitope_Rep2 1241.6292030045697 1241.62810993586 66.179 2 0.06575949600257913 0.003906557248105713 0.0201657654295805 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 2593 6181 AERGDWVQA True NCI_RA007_Epitope_Rep3 1030.4832074772198 1030.48210993586 31.32 2 0.06575655793077015 0.003906557248105713 0.02016703855772124 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'DOK2|p.D205Tfs*3|1|0.4|ENSG00000147443|chr8:21910678-21910678|C/-|frameshift_variant', 'DOK2|p.A237Pfs*167|1|0.21|ENSG00000147443|chr8:21909829-21909841|CCTCTTCCAGGGC/-|frameshift_variant', 'ENSG00000147443|ENST00000276420|DOK2'] 127378 8195 VNDGDMRLAD True PC9_epitope_Rep4 1104.48697252832 1104.4858699358601 38.981 2 0.06575568946991385 0.003906557248105713 0.02016741489416692 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 125200 15284 VIIEKTYSL True PC9_epitope_Rep5 1064.61176203528 1064.6106699358602 63.799 2 0.06575563143507508 0.003906557248105713 0.020167440043054784 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 54017 11320 KVGPVLSV True PC9_epitope_Rep2 797.50108938749 797.49998993586 48.864 2 0.06575349200704916 0.003906557248105713 0.020168367165517734 ['UPP1|p.Y98C|1|0.48|ENSG00000183696|chr7:48101954-48101954|A/G|missense_variant', 'ENSG00000183696|ENST00000395564|UPP1'] 5644 10438 APAAATVAV True PC9_epitope_Rep3 769.4334037504899 769.4328549679301 45.087 1 0.0657450836970895 0.003906557248105713 0.02017201129126126 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 92999 11020 RPKPSSSPVIF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 47.276 3 0.06573566682951518 0.003906557248105713 0.020176093239741517 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 9794 15401 AYKPGALTF True PC9_epitope_Rep1 966.5174677276199 966.51636993586 64.059 2 0.06573458728544071 0.003906557248105713 0.020176561240362285 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 141633 15210 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.49117496793 63.661 1 0.06573250244137982 0.003906557248105713 0.02017746508376605 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 25782 11105 FEVPSTPEA True H1975_Epitope_Rep2 975.4549270407099 975.4543749679301 47.75 1 0.06572677137676272 0.003906557248105713 0.020179949866529528 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 137451 5408 YEDM[Oxidation]AAFM[Oxidation]K True H1975_Epitope_Rep3 1136.4518336504398 1136.4507299358602 25.864 2 0.06572493709532366 0.003906557248105713 0.020180745204143143 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 49004 12077 KEFPGFLEN True NCI_RA007_Epitope_Rep1 1079.5287606873098 1079.52766993586 50.964 2 0.06572183620350631 0.003906557248105713 0.020182089804804446 ['ENSG00000197747|ENST00000368811|S100A10'] 101539 20005 SLLGGDVVSV True PC9_epitope_Rep4 944.51786165044 944.51731496793 85.082 1 0.06571408115729607 0.003906557248105713 0.020185452888148693 ['nc|ENSG00000157514|Q99576|TSC22D3'] 31473 5517 GEAPPSAPP True H1975_Epitope_Rep3 821.3919328613299 821.39082993586 26.269 2 0.06570556717776092 0.003906557248105713 0.020189145686373484 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 84193 21703 PYLDKFFAL True PC9_epitope_Rep2 1112.59063266788 1112.5895299358601 88.957 2 0.06569989918257782 0.003906557248105713 0.020191604429944186 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 114241 5693 TPMPSRPSTTP True NCI_RA007_Epitope_Rep4 1170.57030822946 1170.56920993586 28.51 2 0.06568081238662847 0.003906557248105713 0.02019988619490876 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 34630 6074 GPYGGAQPSA True PC9_epitope_Rep2 903.40864555463 903.40754993586 28.757 2 0.06567499809679396 0.003906557248105713 0.02020240963658751 ['ENSG00000239306|ENST00000310137|RBM14'] 73842 8811 NAMEDAQTL True NCI_RA007_Epitope_Rep3 991.42806066987 991.42696993586 41.749 2 0.06567388140837671 0.003925982149867825 0.02020289432017265 ['nc|ENSG00000196975|P09525|ANXA4', 'ENSG00000196975|ENST00000394295|ANXA4'] 93077 11638 RPNDIMAEV True PC9_epitope_Rep6 1043.50697969691 1043.50588993586 55.886 2 0.06566702367760847 0.003925982149867825 0.02020587106020757 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 104803 22260 SQYPEIIFL True PC9_epitope_Rep4 1108.580461907 1108.57936993586 93.862 2 0.06565871281960693 0.003925982149867825 0.020209479100249457 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 72792 22067 MPFAGLISA True PC9_epitope_Rep1 905.46807500705 905.4675249679301 89.69 1 0.06564360524166057 0.003925982149867825 0.02021603935483898 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 85430 12695 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45416993586 53.934 2 0.06562260561501435 0.003925982149867825 0.020225161398759153 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 119638 20819 VATWVDETL True PC9_epitope_Rep3 1032.51277627 1032.51166993586 85.352 2 0.06560186448200575 0.003925982149867825 0.02023417486686804 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 110197 7031 TEQEVAQVASA True H1975_Epitope_Rep3 1131.54078192299 1131.53968993586 32.008 2 0.06560006582172541 0.003925982149867825 0.02023495668398111 ['ENSG00000196878|ENST00000356082|LAMB3'] 7471 16550 ASAVIGLLY True H1975_Epitope_Rep2 905.52221875489 905.52167496793 68.884 1 0.06559575457875377 0.003925982149867825 0.020236830749228833 ['ENSG00000125629|ENST00000245787|INSIG2'] 27261 22812 FLPSYIIDV True PC9_epitope_Rep5 1065.57464825057 1065.57354993586 92.739 2 0.06558386400845621 0.003925982149867825 0.020242000317957535 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 109046 20186 TAISLFYEL True NCI_RA007_Epitope_Rep2 1055.5539128059902 1055.55337496793 83.547 1 0.06558219583292565 0.003925982149867825 0.020242725674392715 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 98972 6290 SHDAAGAAVL True PC9_epitope_Rep4 910.45084471978 910.44974993586 31.253 2 0.06557555782308412 0.003925982149867825 0.020245612251760057 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 109771 8921 TEDVGVVC True H1975_Epitope_Rep2 820.36366950816 820.36312496793 39.276 1 0.06556364085398161 0.003925982149867825 0.02025079536409653 ['LOXL2|p.Q394Sfs*10|1|0.09|ENSG00000134013|chr8:23322252-23322252|G/-|frameshift_variant', 'ENSG00000134013|ENST00000389131|LOXL2'] 92102 3507 RKYSNEDTL True NCI_RA007_Epitope_Rep4 1124.5462016566 1124.5451099358602 19.467 2 0.06556317697883782 0.003925982149867825 0.020250997144484598 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 6349 7490 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 33.63 2 0.06555754428856642 0.003925982149867825 0.020253447447765045 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 129633 18815 VRPGILVL True PC9_epitope_Rep1 865.5749230340899 865.57382993586 77.159 2 0.0655386048452093 0.003925982149867825 0.020261688382098363 ['nc|ENSG00000167118|Q9BTM9-2|URM1', 'ENST00000470840.5_1_9:131140285-131152010:+|nuORF', 'ENSG00000167118|ENST00000372853|URM1'] 94878 12337 RTADGEFMAV True PC9_epitope_Rep4 1095.50189431647 1095.5007899358602 55.263 2 0.0655304713139225 0.003925982149867825 0.020265228391066623 ['ENST00000506639.5_1_5:33994220-34005893:-|nuORF', 'ENSG00000242110|ENST00000335606|AMACR', 'nc|ENSG00000242110|Q9UHK6-5|AMACR'] 90183 3085 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 16.264 2 0.06552202463329171 0.003925982149867825 0.02026890529531897 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 61217 16489 LILSPTREL True PC9_epitope_Rep1 1040.62299542532 1040.62188993586 68.25 2 0.06552092710933255 0.003925982149867825 0.020269383100815 ['ENSG00000088205|ENST00000263239|DDX18', 'DDX18|p.M265I|1|0.18|ENSG00000088205|chr2:117821905-117821905|G/T|missense_variant', 'ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54'] 65013 20643 LQIDQINTDL True PC9_epitope_Rep2 1171.60846755999 1171.60736993586 84.838 2 0.06550979935219249 0.003925982149867825 0.020274228138275625 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 3496 12149 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep1 1042.5658747883201 1042.56476993586 51.748 2 0.0655044240680807 0.003925982149867825 0.020276568923756955 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 2267 7670 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 34.454 1 0.06545970784915482 0.003925982149867825 0.020296051206086498 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 86093 11629 QHSVPLQL True PC9_epitope_Rep4 920.50796567308 920.50686993586 52.488 2 0.06545894247633742 0.003925982149867825 0.020296384818787438 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 22266 8248 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4499749679298 36.679 1 0.06542919612574784 0.003925982149867825 0.020309354637666536 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 61013 19147 LIENVASL True PC9_epitope_Rep5 857.4858332461699 857.48472993586 78.683 2 0.06542711778931641 0.003925982149867825 0.020310261105404754 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 71314 18661 LYQFNPAFF True NCI_RA007_Epitope_Rep4 1145.5545815123298 1145.5534899358602 80.724 2 0.06541856646088826 0.003925982149867825 0.020313991163600803 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 90631 2762 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 14.707 3 0.06541695739328333 0.003925982149867825 0.0203146931033256 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 24383 14271 FAAGETFL True H1975_Epitope_Rep1 854.41741933318 854.4168749679301 60.077 1 0.06540703195157359 0.003925982149867825 0.020319023470937107 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 6662 16470 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 75.771 2 0.06538964881609097 0.003925982149867825 0.020326609595582357 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 34836 18899 GQISEVVVV True PC9_epitope_Rep1 928.5229470308799 928.52239496793 77.479 1 0.06538576766412275 0.003925982149867825 0.02032830371318686 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 25439 6712 FEEAAGAAP True H1975_Epitope_Rep2 861.3868474808897 861.3862949679301 30.729 1 0.06538429533995671 0.003925982149867825 0.020328946414622344 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 60120 15028 LGLTNQPEL True PC9_epitope_Rep5 983.52876068731 983.52766993586 62.809 2 0.06538158233886028 0.003925982149867825 0.02033013074731832 ['ENSG00000179626|ENST00000641569|OR6C4', 'OR6C4|p.L38*|1|0.39|ENSG00000179626|chr12:55551337-55551337|C/-|frameshift_variant', 'OR6C4|p.H52Tfs*16|1|0.15|ENSG00000179626|chr12:55551376-55551376|C/-|frameshift_variant'] 120163 3578 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 18.663 2 0.06538025116908824 0.003925982149867825 0.020330711878946587 ['ENSG00000155506|ENST00000518297|LARP1'] 86939 18708 QLVEDLDRI True PC9_epitope_Rep2 1099.5873381925899 1099.58624993586 77.332 2 0.06538011033655504 0.003925982149867825 0.020330773361282483 ['nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'FGFR2|p.L776Pfs*8|1|0.06|ENSG00000066468|chr10:121479996-121479997|-/GAGG|frameshift_variant', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF'] 53839 16073 KTFSEILNRV True PC9_epitope_Rep5 1205.67682190333 1205.67572993586 66.814 2 0.06537290615031349 0.003925982149867825 0.02033391867340323 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 100514 22697 SLASLLVSV True PC9_epitope_Rep2 887.5327834385901 887.53168993586 92.799 2 0.06535959140930722 0.003925982149867825 0.020339732999597203 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 137779 4308 YEQEGEVEKP True H1975_Epitope_Rep3 1206.5404475698197 1206.5393499358602 21.685 2 0.06535750572623879 0.003925982149867825 0.020340643921027433 ['nc|ENSG00000078674|Q15154-2|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1'] 87578 17579 QQLGTAVEL True PC9_epitope_Rep5 957.5131106231698 957.51200993586 72.626 2 0.06535599849579775 0.003925982149867825 0.02034130222676917 ['ENSG00000138594|ENST00000308580|TMOD3'] 28584 13530 FSGDPVYL True H1975_Epitope_Rep2 896.4279840168799 896.42743496793 57.179 1 0.06534360017928571 0.003925982149867825 0.020346718121811196 ['ENSG00000242732|ENST00000609883|RTL5'] 78258 11782 NYIDKVRFL True NCI_RA007_Epitope_Rep4 1166.64479349906 1166.64313490379 52.292 3 0.06534322471566675 0.003925982149867825 0.020346882154373015 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 105639 8276 SSDTSALSY True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 36.784 1 0.06533958079423394 0.003925982149867825 0.0203484741740008 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 78293 12821 NYIMKIHNF True PC9_epitope_Rep4 1178.5906497512199 1178.58901490379 57.178 3 0.06533896344064473 0.003925982149867825 0.02034874390547961 ['ENSG00000101126|ENST00000621696|ADNP'] 138564 11835 YIDEGRLVL True NCI_RA007_Epitope_Rep4 1076.5866099165999 1076.58550993586 52.504 2 0.06533183211330756 0.003925982149867825 0.020351859932393655 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 21465 15017 ERLDPGLAL True PC9_epitope_Rep6 982.5447451046198 982.54364993586 69.789 2 0.06533141320208129 0.003925982149867825 0.020352042988891605 ['ENSG00000237649|ENST00000428849|KIFC1'] 118528 14079 TYQDIQNTI True PC9_epitope_Rep6 1094.52440358286 1094.52387496793 66.026 1 0.06532967942840995 0.003925982149867825 0.020352800632161338 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 88230 10914 QSDGGGLLY True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 47.011 1 0.06532918242602867 0.003925982149867825 0.020353017822441446 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'DYM|p.G248V|1|0.16|ENSG00000141627|chr18:49331884-49331884|C/A|missense_variant', 'ENST00000418472.6_1_18:46856042-46938282:-|nuORF'] 117287 14902 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59944993586 62.14 2 0.06532256814361695 0.003925982149867825 0.02035590846966165 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 21811 6957 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58624993586 35.712 2 0.06531856937308475 0.003925982149867825 0.020357656239635764 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 47986 18129 IYKFITERF True PC9_epitope_Rep5 1215.6651945904698 1215.66355490379 74.742 3 0.0653124586652139 0.003925982149867825 0.020360327354656448 ['ENSG00000178919|ENST00000375123|FOXE1'] 35661 5852 GTDVDAANLR True NCI_RA007_Epitope_Rep2 1030.50433684462 1030.5032299358602 27.381 2 0.06531143975167182 0.003925982149867825 0.02036077277384361 ['ENSG00000164305|ENST00000308394|CASP3'] 7987 19970 ATDFGEALV True PC9_epitope_Rep5 921.4443623570098 921.44326993586 81.866 2 0.06530137526953479 0.003925982149867825 0.020365172954063458 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 141181 15852 YSVETVTLL True H1975_Epitope_Rep2 1023.5488274255499 1023.5482749679301 66.17 1 0.06528363635538115 0.003925982149867825 0.020372930512861844 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 8630 18011 AVAAVLTQV True PC9_epitope_Rep2 870.5174677276199 870.51636993586 74.585 2 0.06528045073378069 0.003925982149867825 0.020374323932070164 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 115242 7918 TREDAGSYTL True PC9_epitope_Rep6 1111.51456717515 1111.51346993586 39.888 2 0.06527820766466463 0.003925982149867825 0.020375305122937337 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11'] 76784 12402 NRAEDSICL True PC9_epitope_Rep5 1019.4705941881899 1019.46948993586 52.702 2 0.06527320586113644 0.003925982149867825 0.020377493229553373 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 54510 15569 KYIEGVSDF True PC9_epitope_Rep3 1056.51277627 1056.51166993586 65.036 2 0.06526704319924195 0.003925982149867825 0.020380189466013495 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 104679 17545 SQTSATFQL True PC9_epitope_Rep1 981.4767251144499 981.47562993586 72.28 2 0.06526398212828999 0.003925982149867825 0.020381528842003737 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 127738 11500 VPAPSPLSA True PC9_epitope_Rep6 837.45961849833 837.4590749679301 55.312 1 0.06525330617023616 0.003925982149867825 0.0203862007552138 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 136924 8788 YAGEDCPKV True PC9_epitope_Rep5 980.4273323938799 980.42622993586 38.746 2 0.0652498361147449 0.003925982149867825 0.020387719500242645 ['ENSG00000136518|ENST00000429709|ACTL6A', 'ENST00000491202.5_1_3:179280826-179288052:+|nuORF', 'ACTL6A|p.N90Mfs*47|1|0.2|ENSG00000136518|chr3:179570228-179570228|A/-|frameshift_variant'] 103348 12584 SPNGQFVAP True PC9_epitope_Rep5 915.4450310633499 915.44392993586 53.404 2 0.06524302671841947 0.003925982149867825 0.020390700082111423 ['ENSG00000121741|ENST00000610343|ZMYM2'] 91042 21623 RFLAATFLL True PC9_epitope_Rep2 1050.6226015025 1050.62150993586 88.647 2 0.06523500624447276 0.003925982149867825 0.020394211285140542 ['ENSG00000119655|ENST00000555619|NPC2', 'NPC2|p.K112Tfs*5|1|0.36|ENSG00000119655|chr14:74484443-74484444|-/GG|frameshift_variant', 'nc|ENSG00000119655|P61916-2|NPC2'] 141479 23058 YTIGEVPISFV True PC9_epitope_Rep1 1223.64379043955 1223.64268993586 93.493 2 0.06522543058600448 0.003925982149867825 0.020398404043769663 ['ENSG00000000419|ENST00000371588|DPM1', 'ENST00000466152.5_1_20:49551671-49557490:-|nuORF'] 1245 6871 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.40686993586 31.388 2 0.06522229791143698 0.003925982149867825 0.020399775875610586 ['ENSG00000162783|ENST00000367577|IER5'] 89090 18077 QVPDDLPNV True PC9_epitope_Rep5 995.4923751785899 995.49126993586 74.547 2 0.06522143322348163 0.003925982149867825 0.020400154546668717 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 108888 9107 TAAPLSRIP True H1975_Epitope_Rep2 924.53926580136 924.53816993586 39.982 2 0.0651966784570909 0.003925982149867825 0.020410998088817918 ['ENST00000575214.1_1_16:3073840-3074149:-|nuORF'] 120507 9156 VEFDSVQSA True NCI_RA007_Epitope_Rep4 980.445090633 980.44398993586 42.058 2 0.06519379976571234 0.003925982149867825 0.020412259409998953 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 20839 20252 EQISQFLQA True PC9_epitope_Rep2 1062.53457434374 1062.53346993586 83.319 2 0.06519180990310289 0.003925982149867825 0.020413131325714293 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.Q89H|1|0.32|ENSG00000158710|chr1:159919749-159919749|C/G|missense_variant'] 35802 17636 GTINNLIHV True PC9_epitope_Rep3 979.5450794577899 979.5439899358599 73.028 2 0.06517967047883357 0.0039501909694972005 0.020418451305260255 ['nc|ENSG00000131791|O43741-2|PRKAB2', 'ENSG00000131791|ENST00000254101|PRKAB2'] 34639 16561 GQAFVIFK True PC9_epitope_Rep2 908.5119884243599 908.51088993586 68.94 2 0.06516687185890674 0.0039501909694972005 0.02042406154885105 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 111199 13766 THISDTSVVL True PC9_epitope_Rep1 1070.56078909158 1070.56027496793 57.795 1 0.06516483342695158 0.0039501909694972005 0.020424955221107575 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 114098 20207 TPFTGPFISV True PC9_epitope_Rep6 1064.55424715916 1064.5531499358601 90.4 2 0.06514641938355183 0.0039501909694972005 0.02043302977851574 ['ENSG00000164142|ENST00000435205|FHIP1A'] 137729 16088 YENELMLMA True H1975_Epitope_Rep2 1112.48821839828 1112.4871299358601 67.09 2 0.0651316305317137 0.0039501909694972005 0.02043951681100122 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 34926 7387 GQNPTEAEL True NCI_RA007_Epitope_Rep4 957.44033960573 957.4397949679301 35.056 1 0.0651276678323382 0.0039501909694972005 0.02044125534409031 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 106269 7876 STESSVAVY True H1975_Epitope_Rep2 941.43419159613 941.43364496793 35.241 1 0.06512700083040518 0.0039501909694972005 0.020441547987489567 ['ENST00000411676.6_1_18:55274615-55283204:-|nuORF', 'ENSG00000134440|ENST00000256854|NARS1'] 76939 7508 NRDRTQIAL True PC9_epitope_Rep3 1085.59415490853 1085.59304993586 33.883 2 0.06512073309975473 0.0039501909694972005 0.020444298107409917 ['ENSG00000241685|ENST00000262942|ARPC1A'] 64760 8109 LQAEIEGLK True H1975_Epitope_Rep1 999.5600608155898 999.55896993586 36.136 2 0.06511867412324909 0.0039501909694972005 0.02044520160774673 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'KRT8|p.G326V|1|0.47|ENSG00000170421|chr12:52899779-52899779|C/A|missense_variant', 'CON__H-INV:HIT000292931'] 122545 4906 VGEVIVTK True H1975_Epitope_Rep1 843.50656869075 843.50546993586 23.948 2 0.06510799157685525 0.0039501909694972005 0.020449889808735553 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 127685 9423 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 43.856 2 0.06510027010946812 0.0039501909694972005 0.02045327910866777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 40391 4604 HQVEQTEL True NCI_RA007_Epitope_Rep4 982.4719740871799 982.47086993586 24.122 2 0.06509644613485946 0.0039501909694972005 0.020454957814301886 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 128012 18534 VPIPNSPFKVA True PC9_epitope_Rep3 1167.66519459047 1167.6640899358601 76.509 2 0.0650944834975322 0.0039501909694972005 0.020455819451331764 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 107891 13057 SVVPDVRSV True PC9_epitope_Rep5 956.52909504048 956.52798993586 55.23 2 0.06508890877283073 0.0039501909694972005 0.020458267048641628 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 11891 6420 DHINGRVL True PC9_epitope_Rep5 922.49846361854 922.49736993586 29.671 2 0.06508286830879331 0.0039501909694972005 0.02046091943342757 ['ENSG00000196878|ENST00000356082|LAMB3'] 2248 14465 AENPDIFAV True H1975_Epitope_Rep2 974.4709114580199 974.4703649679301 60.795 1 0.06507656358042462 0.0039501909694972005 0.020463688194051973 ['ENSG00000139514|ENST00000380752|SLC7A1', 'SLC7A1|p.I171V|1|0.13|ENSG00000139514|chr13:29532842-29532842|T/C|missense_variant'] 107128 11312 SVIDGNLELVK True NCI_RA007_Epitope_Rep3 1185.6605031328502 1185.6594099358601 51.605 2 0.06506703560864309 0.0039501909694972005 0.020467873114556473 ['ENSG00000198435|ENST00000356628|NRARP'] 469 10592 AALTSDPAV True PC9_epitope_Rep4 843.4337976733099 843.43270993586 48.484 2 0.065062889938408 0.0039501909694972005 0.020469694240525894 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 141475 13778 YTIDTENSTV True PC9_epitope_Rep1 1141.51389846881 1141.51280993586 57.844 2 0.06505291650116056 0.0039501909694972005 0.02047407601965015 ['nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A'] 141420 4558 YTERRQPLY True H1975_Epitope_Rep3 1224.6251206836398 1224.6234749037899 22.652 3 0.06503147462806393 0.003975831131804033 0.020483499312874184 ['ENSG00000113719|ENST00000393784|ERGIC1', 'nc|ENSG00000113719|Q969X5-2|ERGIC1'] 134281 16885 VYNPELDKW True PC9_epitope_Rep3 1162.5658744720197 1162.56476993586 70.104 2 0.06502220543601261 0.003975831131804033 0.020487574177663774 ['ENSG00000178502|ENST00000319121|KLHL11'] 99179 5735 SHITPSTQQHL True PC9_epitope_Rep5 1247.62584895963 1247.62474993586 27.053 2 0.06501993252244341 0.003975831131804033 0.020488573495417016 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 109722 3366 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 17.665 2 0.06501862340826664 0.003975831131804033 0.02048914908579564 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 97295 8281 SEALIREVA True H1975_Epitope_Rep2 986.53965972418 986.53856993586 36.803 2 0.06501509314673513 0.003975831131804033 0.020490701342611068 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP'] 115848 10480 TSDVGGYYY True H1975_Epitope_Rep3 1023.4185415319901 1023.41744993586 45.374 2 0.06497852236677791 0.0039948823729079085 0.020506787873882888 ['ENSG00000131711|ENST00000296755|MAP1B'] 27902 20613 FQDSVFNDL True PC9_epitope_Rep4 1083.48728979815 1083.48618993586 87.442 2 0.0649709817288836 0.0039948823729079085 0.02051010624444125 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 97666 8791 SEHGLVVIA True H1975_Epitope_Rep2 923.5076313199099 923.50652993586 38.778 2 0.0649688238035737 0.0039948823729079085 0.02051105596244819 ['ENSG00000139684|ENST00000378720|ESD'] 10190 19093 AYYPAQGVQQF True PC9_epitope_Rep1 1270.59823722946 1270.5971499358602 78.231 2 0.06495957907241864 0.0039948823729079085 0.020515125090005453 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 87155 17878 QPFGDHIISV True PC9_epitope_Rep2 1111.56620882519 1111.5651099358602 74.07 2 0.06494569942082283 0.0039948823729079085 0.0205212356984072 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 38838 5995 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 28.114 2 0.064937024505402 0.0039948823729079085 0.020525055735377922 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 125316 7081 VIPELNGK True NCI_RA007_Epitope_Rep2 868.50181766348 868.50072993586 32.168 2 0.06493141043290845 0.0039948823729079085 0.02052752826453652 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 74827 7329 NHDYSYTV True PC9_epitope_Rep6 997.4141248578901 997.41302993586 37.363 2 0.06492884941237499 0.0039948823729079085 0.020528656270552635 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 210 9349 AAFGGTFKKV True PC9_epitope_Rep1 1024.5705659296398 1024.56946993586 40.818 2 0.0649085775889263 0.0039948823729079085 0.020537587038080837 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 21149 8402 ERAQGVVL True PC9_epitope_Rep5 870.4923156089399 870.49120993586 37.261 2 0.06490823035230385 0.0039948823729079085 0.0205377400444941 ['ENSG00000136950|ENST00000353214|ARPC5L'] 103218 8023 SPKQILDPA True PC9_epitope_Rep2 967.5338460677499 967.53274993586 36.221 2 0.06490527485042427 0.0039948823729079085 0.020539042399758758 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 71805 7472 MEGPTPVSA True H1975_Epitope_Rep3 887.4058686733099 887.40531496793 33.72 1 0.0649018565177304 0.0039948823729079085 0.020540548798019462 ['ENSG00000198786|ENST00000361567|MT-ND5'] 6070 7227 APLLQPRAA True PC9_epitope_Rep6 935.5552502186699 935.55414993586 36.909 2 0.06490173260888954 0.0039948823729079085 0.020540603404339896 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 1193 8232 AEATGAYVP True H1975_Epitope_Rep2 877.41814760917 877.4175949679301 36.615 1 0.06490080813010217 0.0039948823729079085 0.02054101082406462 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'nc|ENSG00000126456|Q14653-2|IRF3'] 132193 17039 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.49037496793 70.366 1 0.06489371547944728 0.0039948823729079085 0.020544136816631187 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 6523 7117 APTGDLPRA True PC9_epitope_Rep5 896.4715801643599 896.47048993586 32.343 2 0.06489025526278637 0.0039948823729079085 0.02054566202006301 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 52814 11729 KPAEFTIDA True PC9_epitope_Rep2 990.5022115862998 990.50110993586 50.448 2 0.0648883200702753 0.0039948823729079085 0.020546515064624595 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 72267 12332 MHSIGGVQV True PC9_epitope_Rep5 926.4643866089399 926.46328993586 52.428 2 0.06486782994959746 0.0039948823729079085 0.020555549227554492 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 39158 6471 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.5406899358602 33.533 2 0.06486599167938373 0.0039948823729079085 0.020556359905183504 ['ENSG00000156482|ENST00000287038|RPL30'] 53085 5296 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 25.384 2 0.06486261450845972 0.0039948823729079085 0.020557849314862785 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 18790 11309 ELDENLEY True H1975_Epitope_Rep3 1023.43967089939 1023.43907496793 48.606 1 0.06485201998423198 0.0039948823729079085 0.02056252238507522 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 2289 12025 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 51.335 2 0.0648513045147683 0.0039948823729079085 0.02056283800200393 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 104751 12959 SQVPEVTTV True PC9_epitope_Rep4 958.49712620586 958.49602993586 57.739 2 0.06484453814517183 0.0039948823729079085 0.020565823088229514 ['ENSG00000196455|ENST00000356763|PIK3R4'] 23874 12401 EYIQKNVQL True PC9_epitope_Rep3 1133.6080736371698 1133.6069699358602 52.729 2 0.06480899036498332 0.0039948823729079085 0.020581512060635083 ['ENSG00000126067|ENST00000373237|PSMB2'] 77182 8576 NRSDPVTL True PC9_epitope_Rep1 900.46649478392 900.46538993586 37.824 2 0.06480151142005934 0.0039948823729079085 0.02058481428224597 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 114505 10251 TQAEQTLNV True PC9_epitope_Rep4 1002.49818883502 1002.49708993586 47.113 2 0.06479785211141746 0.0039948823729079085 0.0205864301749433 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 73480 22717 M[Oxidation]VDGTLLLL True PC9_epitope_Rep1 989.5467196310099 989.54617496793 92.185 1 0.06479717103322621 0.0039948823729079085 0.020586730941122212 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 23758 21553 EYGNIIVTL True PC9_epitope_Rep2 1020.54916177872 1020.5485749679301 88.373 1 0.06479619021117133 0.0039948823729079085 0.020587164082176118 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 35218 10961 GRAPGGLSL True PC9_epitope_Rep5 826.4661008611 826.4650099358599 47.151 2 0.06479599339080022 0.0039948823729079085 0.02058725100107276 ['ENSG00000171223|ENST00000302754|JUNB'] 77826 15128 NVDGHLYEL True PC9_epitope_Rep2 1058.5032742154601 1058.5021699358601 63.449 2 0.0647946280627442 0.0039948823729079085 0.020587853960164798 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1', 'ENST00000510566.1_1_4:41263775-41266241:+|nuORF'] 31933 9221 GEMWSEQSA True H1975_Epitope_Rep2 1023.39676054159 1023.3956699358599 40.422 2 0.06478825789304296 0.0039948823729079085 0.020590667382241443 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 87397 9566 QPVSGTQVV True PC9_epitope_Rep1 913.48689587533 913.48578993586 41.654 2 0.06478392317419115 0.0039948823729079085 0.020592582037400536 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 47375 9119 IVIETGPLK True NCI_RA007_Epitope_Rep4 968.5906326678798 968.58952993586 41.917 2 0.06477436706661462 0.0039948823729079085 0.020596803568741055 ['ENSG00000151657|ENST00000379562|KIN'] 25548 20370 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54788496793 84.411 1 0.06476951588489406 0.0039948823729079085 0.020598946943398123 ['ENSG00000125356|ENST00000371437|NDUFA1'] 93092 8676 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 38.211 2 0.06475809714291146 0.0039948823729079085 0.020603992839762976 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 132131 12499 VTVEKVIKI True PC9_epitope_Rep5 1027.6641319613097 1027.66302993586 53.075 2 0.06473815099017496 0.0039948823729079085 0.020612809685022 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 310 9727 AAHLLNDAL True NCI_RA007_Epitope_Rep4 936.50288029264 936.50178993586 44.26 2 0.06473721686631634 0.0039948823729079085 0.020613222682833367 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 78241 19100 NYGQYFTLW True NCI_RA007_Epitope_Rep4 1190.53965972418 1190.53856993586 82.616 2 0.0647270579331097 0.0039948823729079085 0.020617714672867233 ['ENSG00000109929|ENST00000264027|SC5D'] 93073 12283 RPNDIMAEV True PC9_epitope_Rep4 1043.50697969691 1043.50588993586 55.063 2 0.06472599184689411 0.0039948823729079085 0.020618186117789376 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 105955 5539 SSSPPILTK True NCI_RA007_Epitope_Rep4 928.52294703088 928.52184993586 27.902 2 0.06472225909657449 0.0039948823729079085 0.020619836893527196 ['ENSG00000083168|ENST00000265713|KAT6A'] 104830 16543 SRAGLQFPV True PC9_epitope_Rep3 973.53451477409 973.53340993586 68.771 2 0.06471551589658296 0.0039948823729079085 0.020622819321272117 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 115447 14649 TRMPDGPVAL True PC9_epitope_Rep5 1055.54336520563 1055.54277496793 61.35 1 0.06470886672014654 0.0039948823729079085 0.0206257605510911 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 31796 5966 GEIEYEVQR True NCI_RA007_Epitope_Rep3 1121.53530261973 1121.5342099358602 30.448 2 0.0647049986952805 0.0039948823729079085 0.02062747172948975 ['ENSG00000173546|ENST00000308508|CSPG4'] 128307 5900 VPPPPPIAR True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 29.381 2 0.06470305543300724 0.0039948823729079085 0.02062833145987515 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 35193 9073 GRADGYVL True PC9_epitope_Rep4 849.43446637965 849.43336993586 42.483 2 0.06469814375147374 0.0039948823729079085 0.020630504613058 ['ENSG00000142937|ENST00000396651|RPS8'] 138434 17945 YHISLEHEIL True PC9_epitope_Rep5 1252.64518742188 1252.6440899358602 74.043 2 0.06469375265740487 0.0039948823729079085 0.020632447612252622 ['ENSG00000168002|ENST00000301788|POLR2G'] 103695 6729 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 30.906 2 0.06469068991159563 0.0039948823729079085 0.020633802934834904 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 29555 22698 FVIDGFDEL True PC9_epitope_Rep2 1053.50187723313 1053.50137496793 92.803 1 0.0646831460823777 0.0039948823729079085 0.020637141569329314 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.D307Tfs*16|1|0.41|ENSG00000022556|chr19:54982614-54982614|G/-|frameshift_variant'] 40044 9641 HPTEDLVVSA True PC9_epitope_Rep4 1066.5294889632999 1066.52838993586 44.708 2 0.06465499769994437 0.0039948823729079085 0.020649603431223823 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 26901 19633 FLDGNELTL True PC9_epitope_Rep6 1020.51277627 1020.51227496793 88.178 1 0.06464522381166724 0.0039948823729079085 0.02065393214461578 ['ENSG00000213719|ENST00000375784|CLIC1'] 7055 9807 AQQPTAVQV True PC9_epitope_Rep5 940.4977949121998 940.49668993586 42.69 2 0.06464445693510557 0.0039948823729079085 0.02065427181833403 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 48226 12520 IYQDVTLKW True NCI_RA007_Epitope_Rep3 1164.6179100448799 1164.6168099358601 56.477 2 0.06464303836531343 0.0039948823729079085 0.020654900160959465 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9', 'nc|ENSG00000122507|Q3SYG4-5|BBS9'] 114225 8754 TPLYTDNTA True PC9_epitope_Rep6 994.46074069714 994.4596499358599 43.562 2 0.06463945257100347 0.0039948823729079085 0.020656488534201 ['ENSG00000174231|ENST00000304992|PRPF8'] 43196 22011 IFIDPGYQTF True PC9_epitope_Rep1 1199.58627556343 1199.5857749679299 89.489 1 0.06463888277161296 0.0039948823729079085 0.02065674094441031 ['ENSG00000121741|ENST00000610343|ZMYM2'] 121875 13982 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 65.64 2 0.0646340966433857 0.0039948823729079085 0.02065886121915898 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 121598 21247 VFFKELIQEF True PC9_epitope_Rep4 1298.6910749851397 1298.68996993586 89.891 2 0.06463324253516721 0.0039948823729079085 0.02065923961364629 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 33170 18207 GIVGGLSTV True PC9_epitope_Rep5 801.4596184983301 801.4590749679301 75.045 1 0.06463157961930022 0.0039948823729079085 0.020659976351402237 ['ENSG00000165678|ENST00000372134|GHITM'] 22403 16710 ETEKFWMFY True H1975_Epitope_Rep2 1279.55834656343 1279.55724993586 69.511 2 0.06461348140041777 0.0039948823729079085 0.02066799613930525 ['ENSG00000184857|ENST00000333050|TMEM186'] 121817 15459 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 67.393 2 0.06461096085958952 0.0039948823729079085 0.02066911328247806 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 47221 19894 IVAPGTFEV True PC9_epitope_Rep2 931.5014833103099 931.5009349679301 81.917 1 0.06460588138070965 0.0039948823729079085 0.020671364755326885 ['ENSG00000143621|ENST00000361891|ILF2'] 110941 11447 THAAQQILL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 49.351 2 0.06460470533831401 0.0039948823729079085 0.020671886066756698 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 46902 11503 ITLTGVHQV True PC9_epitope_Rep2 966.5498304850602 966.54872993586 49.57 2 0.06460329079205886 0.0039948823729079085 0.020672513117208503 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF'] 125126 19160 VIFTKFDEV True PC9_epitope_Rep5 1096.580461907 1096.57936993586 78.736 2 0.06460233404598993 0.0039948823729079085 0.020672937240520963 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'CLASP1|p.R838Afs*20|1|0.22|ENSG00000074054|chr2:121407628-121407628|G/-|frameshift_variant'] 96692 17175 SALDTITTV True PC9_epitope_Rep6 919.48622716899 919.48512993586 78.651 2 0.0645814064560102 0.0039948823729079085 0.02068221638915943 ['ENSG00000138160|ENST00000260731|KIF11'] 84818 7889 QEAEPPLTA True H1975_Epitope_Rep3 954.4658260775799 954.4652749679301 35.32 1 0.06457880543486287 0.0039948823729079085 0.02068336993076997 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 141269 6320 YTDKIM[Oxidation]TY True H1975_Epitope_Rep3 1049.47394861357 1049.47284993586 29.303 2 0.06457656492085029 0.0039948823729079085 0.02068436363632993 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 71665 17295 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50884993586 71.818 2 0.0645748891062096 0.0039948823729079085 0.020685106916862827 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 39365 5637 HKFAGDKGYL True NCI_RA007_Epitope_Rep2 1134.5821932425 1134.58054490379 26.54 3 0.06457145189088304 0.0039948823729079085 0.02068663151487916 ['ENSG00000197747|ENST00000368811|S100A10', 'ENST00000478574.5_1_1:151956596-151958706:-|nuORF', 'ENST00000478348.1_1_1:151957748-151958706:-|nuORF'] 48813 4453 KDREDYVP True NCI_RA007_Epitope_Rep4 1020.4876241513199 1020.48652993586 23.503 2 0.06456290450734932 0.004012088370154231 0.02069042320621476 ['ENSG00000138594|ENST00000308580|TMOD3'] 20058 14874 EMDSPILGDY True H1975_Epitope_Rep3 1138.4852411928198 1138.48467496793 62.599 1 0.06454982965307822 0.004012088370154231 0.020696224554837425 ['ENSG00000182195|ENST00000370526|LDOC1'] 78457 18546 NYMEVVSLL True NCI_RA007_Epitope_Rep3 1066.53688284286 1066.53578993586 81.151 2 0.06454130133838193 0.004012088370154231 0.020700009395166655 ['ENSG00000115159|ENST00000438166|GPD2', 'nc|ENSG00000115159|P43304-2|GPD2'] 9098 22173 AVIGGLVYL True PC9_epitope_Rep2 903.5429541994699 903.54184993586 90.776 2 0.0645344479426905 0.004012088370154231 0.02070305137145497 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 114591 13003 TQDGTPITV True PC9_epitope_Rep5 930.4658260775799 930.4652749679301 55.024 1 0.06453077616658981 0.004012088370154231 0.020704681309676957 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 30073 11646 FYIHEVQEL True NCI_RA007_Epitope_Rep3 1176.5815245361598 1176.5804299358601 52.929 2 0.06452808473736228 0.004012088370154231 0.020705876136832026 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF'] 104789 19578 SQYGEIVNI True PC9_epitope_Rep2 1021.5080252427299 1021.5074749679301 80.688 1 0.064504222362079 0.004012088370154231 0.020716472312729953 ['ENSG00000134597|ENST00000305536|RBMX2'] 1398 4808 AEEEGVPRP True H1975_Epitope_Rep2 982.4719740871798 982.47086993586 23.583 2 0.06450289150399288 0.004012088370154231 0.020717063431544606 ['ENSG00000142235|ENST00000600059|LMTK3'] 3924 8205 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 41.134 2 0.06448906587224859 0.004012088370154231 0.020723205189858748 ['ENSG00000075618|ENST00000382361|FSCN1'] 112169 8076 TKDSGSISL True PC9_epitope_Rep1 906.46582607758 906.46472993586 35.889 2 0.06447805709233198 0.004012088370154231 0.02072809681240765 ['ENSG00000065613|ENST00000369755|SLK', 'nc|ENSG00000065613|Q9H2G2-2|SLK'] 103975 21904 SQAPFIVAL True PC9_epitope_Rep2 944.5331177917599 944.53202993586 89.73 2 0.06447018020044591 0.004012088370154231 0.020731597466893223 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 77676 15604 NTIDRLIQA True PC9_epitope_Rep3 1042.57710786206 1042.5760099358602 65.17 2 0.06446319899844373 0.004012088370154231 0.020734700511288253 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 4372 18354 AILTAVHMI True PC9_epitope_Rep4 967.55247333735 967.55136993586 78.665 2 0.0644593610078683 0.004012088370154231 0.020736406624588033 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000553629.5_1_14:24035015-24036984:-|nuORF', 'ENST00000557619.5_1_14:24035015-24036327:-|nuORF', 'ENST00000556743.5_1_14:24034808-24036327:-|nuORF', 'ENST00000556277.5_1_14:24034355-24036984:-|nuORF', 'ENST00000460049.6_1_14:24033375-24036327:-|nuORF', 'ENST00000465445.6_1_14:24034355-24036327:-|nuORF'] 104498 18852 SQMPAGSFITA True PC9_epitope_Rep2 1108.52229540788 1108.52118993586 77.882 2 0.06445373763382224 0.004012088370154231 0.02073890663214005 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 121470 9920 VEYEVPEA True H1975_Epitope_Rep3 934.4283779396998 934.4278249679301 43.189 1 0.06445182373171586 0.004012088370154231 0.020739757566850855 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 98743 11913 SGGPVVVL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 50.903 1 0.06444859707058978 0.004012088370154231 0.02074119223618965 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 117175 21404 TVLEQVLPI True PC9_epitope_Rep4 1010.6011973515798 1010.6006749679301 90.5 1 0.06444450703432325 0.004012088370154231 0.02074301091852093 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 9220 14627 AVNPHFIAV True PC9_epitope_Rep2 966.5287011176599 966.52760993586 61.53 2 0.064434117945022 0.004012088370154231 0.020747631205654947 ['ENSG00000106789|ENST00000375077|CORO2A'] 5188 21187 ALMPVLNQV True PC9_epitope_Rep1 983.54738795691 983.54628993586 86.33 2 0.064424274208898 0.004012088370154231 0.020752009831158436 ['ENSG00000223496|ENST00000435634|EXOSC6'] 40775 9355 HRVEEEHVIL True PC9_epitope_Rep5 1259.6622344683499 1259.66059490379 40.939 3 0.06441883372924101 0.004012088370154231 0.02075443019278754 ['ENSG00000136381|ENST00000258886|IREB2'] 117046 19612 TVIATNILL True PC9_epitope_Rep6 956.59063266788 956.58952993586 88.098 2 0.06441771510094531 0.004012088370154231 0.020754927880434617 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 47836 20473 IYGYVAEQF True PC9_epitope_Rep5 1088.5178616504397 1088.51727496793 83.787 1 0.06441709410135803 0.004012088370154231 0.02075520417338023 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 65008 8410 LQIDNARLA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 39.025 2 0.06441672611155617 0.004012088370154231 0.020755367899695815 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 107473 18890 SVMGNIIHV True PC9_epitope_Rep1 968.51133680136 968.51022993586 77.445 2 0.06440305753902406 0.004012088370154231 0.02076145017076036 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 96151 9473 RYPDRITLI True NCI_RA007_Epitope_Rep3 1145.65569253593 1145.65405490379 44.364 3 0.06439613128340534 0.004012088370154231 0.02076453285478951 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 77271 11114 NSATGVPTV True PC9_epitope_Rep5 844.42904664604 844.4279499358599 47.74 2 0.0643946507688279 0.004012088370154231 0.020765191845146358 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 55106 8371 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 37.141 2 0.06438000994827879 0.004012088370154231 0.020771709638468094 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 39992 10620 HPNQPLTITA True PC9_epitope_Rep1 1090.57710786206 1090.5760099358602 45.743 2 0.0643734887419118 0.004012088370154231 0.0207746133496167 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 75219 14125 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 59.486 2 0.06436740285614405 0.004012088370154231 0.02077732356034057 ['ENSG00000116285|ENST00000377482|ERRFI1'] 101808 12182 SLPEELQKC True PC9_epitope_Rep2 1045.51139637101 1045.51028993586 52.17 2 0.06436393430644895 0.004012088370154231 0.020778868345015498 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 99136 13732 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 57.902 2 0.06434785389104596 0.004012088370154231 0.020786031439977558 ['ENSG00000132646|ENST00000379143|PCNA'] 13981 6217 DRDPASGTAL True PC9_epitope_Rep6 1001.47778774361 1001.47668993586 32.383 2 0.06433984670884821 0.004012088370154231 0.02078959912026586 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 93032 8761 RPLLKAITA True PC9_epitope_Rep2 981.63350053937 981.63240993586 39.055 2 0.06430886403725976 0.004012088370154231 0.02080340904893621 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 46714 15936 ITDYLIEEV True H1975_Epitope_Rep2 1093.55430672881 1093.5532099358602 66.497 2 0.06430707543333782 0.004012088370154231 0.020804206541337293 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 109958 9214 TEHFLTAVA True H1975_Epitope_Rep1 987.5025459394699 987.50144993586 40.351 2 0.06429817597877814 0.004012088370154231 0.02080817499543059 ['ENSG00000130119|ENST00000360845|GNL3L'] 45441 17171 IQIMKVEEI True PC9_epitope_Rep4 1101.61038213629 1101.60928993586 74.054 2 0.0642875328471043 0.004012088370154231 0.020812921902978548 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 105334 18273 SRPPLVVF True PC9_epitope_Rep5 913.53853752537 913.53744993586 75.3 2 0.06427337394329131 0.004012088370154231 0.02081923840689307 ['nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 124731 18188 VHAPPMQLGF True PC9_epitope_Rep2 1095.5535359665098 1095.5524299358601 75.268 2 0.06427195535288406 0.004012088370154231 0.02081987135864067 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 78699 6215 PAAAAAAAAAA True PC9_epitope_Rep2 825.4344663796498 825.43336993586 29.303 2 0.06426020004392047 0.004012088370154231 0.02082511706319415 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 39177 6046 HIDVGGHM[Oxidation]Y True H1975_Epitope_Rep3 1043.44946520123 1043.44836993586 28.269 2 0.06425743965223009 0.004012088370154231 0.020826349039639827 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15'] 85788 5339 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 25.924 2 0.06425725802565727 0.004012088370154231 0.020826430102818594 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 105286 10062 SRLTKVEEL True PC9_epitope_Rep3 1073.60807363717 1073.6069699358602 43.659 2 0.06425626269859018 0.004012088370154231 0.020826874340175407 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 121184 7991 VESGVPQPP True H1975_Epitope_Rep2 908.4603467743198 908.45924993586 35.686 2 0.06425186741394817 0.004012088370154231 0.020828836160638412 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 124480 6127 VGVNGFGR True H1975_Epitope_Rep3 804.4242360491198 804.42312993586 28.58 2 0.0642505314324213 0.004012088370154231 0.02082943250504874 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 108597 22820 SYPDLLPTF True PC9_epitope_Rep3 1051.52261267771 1051.5215099358602 93.047 2 0.06424065875790362 0.004012088370154231 0.02083383987317878 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 72032 8578 METGTGLTP True H1975_Epitope_Rep3 905.4164333570099 905.4158849679301 37.986 1 0.06423791249506693 0.004012088370154231 0.02083506601421638 ['ENSG00000068489|ENST00000262293|PRR11'] 109955 6516 TEGYSPPAA True H1975_Epitope_Rep2 891.3974121645898 891.39686496793 29.977 1 0.06423667945859127 0.004012088370154231 0.02083561655718971 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 126908 14475 VLQSALAAIR True PC9_epitope_Rep2 1040.6342288153598 1040.63312993586 60.948 2 0.06422785979089544 0.004012088370154231 0.0208395548717166 ['ENSG00000143621|ENST00000361891|ILF2'] 24832 14055 FAVIGRSSL True PC9_epitope_Rep4 948.53926580136 948.53816993586 61.972 2 0.06422722707537057 0.004012088370154231 0.020839837429307555 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'ENST00000502426.5_1_17:48755439-48768558:+|nuORF'] 11870 17095 DHIHIIAL True PC9_epitope_Rep3 930.52870111766 930.52760993586 70.907 2 0.06419685469672984 0.004012088370154231 0.020853405232297683 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 58345 8471 LENDQIESLR True NCI_RA007_Epitope_Rep1 1215.60953018915 1215.6084299358602 36.949 2 0.0641923973469881 0.004012088370154231 0.02085539707923708 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF'] 84358 14954 PYYSKFILI True NCI_RA007_Epitope_Rep3 1142.6375828603 1142.63648993586 66.259 2 0.06417368453527492 0.004012088370154231 0.02086376113857736 ['ENSG00000164815|ENST00000297431|ORC5'] 75038 11514 NHSGAVVLL True PC9_epitope_Rep4 908.50796567308 908.50686993586 52.051 2 0.06417148117540641 0.004012088370154231 0.020864746175887267 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'ITGA6|p.G477Efs*22|1|0.1|ENSG00000091409|chr2:172476437-172476437|G/-|frameshift_variant', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 53292 15637 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6750499358602 65.294 2 0.06417088148924671 0.004012088370154231 0.020865014279844052 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 14168 17711 DSDPFSSFY True H1975_Epitope_Rep3 1063.41345615155 1063.4128749679298 74.044 1 0.06416105305147587 0.004012088370154231 0.02086940876656314 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF'] 104418 12086 SQLEEGKPGYL True PC9_epitope_Rep3 1219.6084675599898 1219.60736993586 51.531 2 0.06415911218806553 0.004012088370154231 0.02087027666482731 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 6920 17937 AQIHDLVLV True PC9_epitope_Rep2 1006.58113061334 1006.58002993586 74.3 2 0.06415679329410479 0.004012088370154231 0.020871313650842917 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 142296 12474 YYDKHFTEF True PC9_epitope_Rep2 1248.54513902744 1248.5440499358601 53.291 2 0.06414682827439688 0.004012088370154231 0.020875770444722577 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 85060 10091 QEISHLIEP True NCI_RA007_Epitope_Rep2 1064.55022440788 1064.54912993586 43.841 2 0.06413417583725592 0.004012088370154231 0.020881430426196092 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 131756 20987 VTPPGFQLV True PC9_epitope_Rep3 956.53311779176 956.53202993586 86.003 2 0.06413199753903087 0.004012088370154231 0.02088240501493652 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 97961 10448 SENPSVYVP True NCI_RA007_Epitope_Rep4 990.4658260775799 990.4652749679301 47.038 1 0.06412815229860672 0.004012088370154231 0.020884125509214504 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 114626 20530 TQDTNTFFL True PC9_epitope_Rep4 1085.50293986229 1085.5023749679299 87.119 1 0.06412485100367449 0.004012088370154231 0.020885602726997788 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 9596 18873 AYAENIALL True PC9_epitope_Rep6 976.5229470308799 976.52239496793 85.243 1 0.06410789529733543 0.004012088370154231 0.020893191340811926 ['ENSG00000196455|ENST00000356763|PIK3R4'] 90202 3085 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 16.36 2 0.06410380825230741 0.004012088370154231 0.02089502089676336 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 26453 16272 FIDDANYSV True PC9_epitope_Rep6 1042.4607406971402 1042.4596499358602 74.954 2 0.06409906210597223 0.004012088370154231 0.020897145682068113 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 16391 6992 EEITGTQPP True H1975_Epitope_Rep2 970.46074069714 970.4596499358599 31.818 2 0.06408742831553986 0.004012088370154231 0.02090235480964355 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 43866 6184 IHSSSTVL True PC9_epitope_Rep1 842.44978209062 842.44868993586 28.602 2 0.06407842666875364 0.004012088370154231 0.020906386189211562 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 103194 18459 SPILVATAV True PC9_epitope_Rep4 869.52221875489 869.52112993586 79.072 2 0.0640757896904373 0.004012088370154231 0.020907567292538932 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 89448 15929 QYEQVKQLF True PC9_epitope_Rep2 1181.6080736371698 1181.6069699358602 66.52 2 0.06407558052870406 0.004012088370154231 0.020907660978755002 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 71934 9772 MEQQTLSIA True H1975_Epitope_Rep3 1019.4957463068699 1019.49464993586 42.611 2 0.06407486205054536 0.004012088370154231 0.020907982797243728 ['ENSG00000104738|ENST00000649973|MCM4'] 133639 12141 VYAILTHGI True NCI_RA007_Epitope_Rep4 985.5596668927699 985.55856993586 53.696 2 0.06406544455608558 0.004012088370154231 0.020912201471572547 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 84873 5639 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 26.69 1 0.06404779063104801 0.004012088370154231 0.020920111850674522 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 99409 3845 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 20.962 2 0.06403583043665897 0.004012088370154231 0.02092547253803683 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 7975 10309 ATDDSLYY True H1975_Epitope_Rep3 946.39199243098 946.39144496793 44.708 1 0.06403222845619312 0.004012088370154231 0.02092708723088383 ['ENSG00000149260|ENST00000648180|CAPN5'] 86253 19543 QIPQVLNQV True PC9_epitope_Rep3 1037.58694426977 1037.58584993586 80.405 2 0.06403018551411846 0.004012088370154231 0.020928003090015013 ['ENSG00000205339|ENST00000379719|IPO7'] 140561 17341 YRPPEVIL True PC9_epitope_Rep1 985.5596668927699 985.55856993586 71.516 2 0.06403008033689599 0.004012088370154231 0.020928050242379953 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 121597 21941 VFFKELIQEF True PC9_epitope_Rep2 1298.6910749851397 1298.68996993586 89.872 2 0.06402690924208049 0.004012088370154231 0.020929471932590944 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 1408 5438 AEEERYFRA True H1975_Epitope_Rep3 1169.5465360097699 1169.54488490379 25.976 3 0.06402301867765314 0.004012088370154231 0.020931216301966107 ['ENSG00000130770|ENST00000335514|ATP5IF1'] 120427 4898 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 23.923 2 0.06401359719335219 0.004012088370154231 0.020935441060628317 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 128707 13047 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 55.054 2 0.0640119698136963 0.004012088370154231 0.020936170885309063 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 142893 18788 YYTTPIYRF True PC9_epitope_Rep2 1222.60225998074 1222.60116993586 77.637 2 0.06401108874414252 0.004012088370154231 0.020936566024901706 ['ENSG00000104957|ENST00000221554|YJU2B'] 1188 12876 AEASMVIAV True H1975_Epitope_Rep3 889.45790424617 889.4573549679301 54.752 1 0.0640091177242475 0.004012088370154231 0.020937450007094353 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'ENST00000545930.5_1_11:61091835-61095006:-|nuORF'] 118339 19374 TYMKDLYQL True PC9_epitope_Rep1 1173.5739966275698 1173.57288993586 79.331 2 0.06399724120121734 0.004012088370154231 0.020942777229612988 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 77902 21738 NVIESFTEL True PC9_epitope_Rep2 1050.5233409537 1050.52277496793 89.093 1 0.06399358041366457 0.004012088370154231 0.020944419528734146 ['nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'ENSG00000197562|ENST00000248139|RAB40C'] 2724 11486 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 49.236 1 0.06398960796425272 0.004012088370154231 0.020946201778795134 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 25498 11892 FEGGVVIAA True H1975_Epitope_Rep1 861.4596184983299 861.4590749679301 50.743 1 0.06396197471922546 0.0040306852164868024 0.020958603353577625 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 8010 16903 ATDLAYYLV True H1975_Epitope_Rep3 1027.52261267771 1027.52207496793 70.577 1 0.06395256088687055 0.0040306852164868024 0.02096282974059602 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 67630 21397 LSVPGLVSV True PC9_epitope_Rep5 869.52221875489 869.52112993586 87.365 2 0.06395182286069478 0.0040306852164868024 0.020963161114133762 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 103010 20136 SPFLNNVEV True PC9_epitope_Rep2 1017.51311062317 1017.51200993586 82.864 2 0.06394470126359074 0.0040306852164868024 0.02096635895573415 ['ENSG00000113504|ENST00000264930|SLC12A7', 'nc|ENSG00000113504|Q9Y666-2|SLC12A7'] 108595 22685 SYPDLLPTF True PC9_epitope_Rep2 1051.52261267771 1051.52207496793 92.751 1 0.06393726024776086 0.0040306852164868024 0.02096970070470711 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 34805 8214 GQHSISYTL True NCI_RA007_Epitope_Rep4 1004.4927095317599 1004.49160993586 38.382 2 0.06393015133960843 0.0040306852164868024 0.02097289376037049 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3', 'ENSG00000139946|ENST00000267460|PELI2'] 44329 14529 ILDPHVVLL True H1975_Epitope_Rep1 1017.6222671493299 1017.6211699358599 61.089 2 0.0639176684645482 0.0040306852164868024 0.02097850167871301 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 53024 6381 KPKVIIVQA True PC9_epitope_Rep2 994.6539016307798 994.65280993586 29.95 2 0.06391716651313419 0.0040306852164868024 0.020978727208577356 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 31003 7901 GASKAVFL True H1975_Epitope_Rep2 791.45413919507 791.45304993586 35.338 2 0.06391504669787325 0.0040306852164868024 0.020979679679136744 ['nc|ENSG00000109046|Q9Y6I7-2|WSB1', 'ENSG00000109046|ENST00000262394|WSB1'] 34093 19583 GLYEGLTWL True H1975_Epitope_Rep3 1050.53859709502 1050.53807496793 82.051 1 0.06391337057572831 0.0040306852164868024 0.020980432818561025 ['ENSG00000165527|ENST00000298316|ARF6'] 98884 11310 SGVSLAALK True PC9_epitope_Rep2 844.50181766348 844.50072993586 48.827 2 0.06391155948837722 0.0040306852164868024 0.020981246630340657 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 24370 18936 FAADIISVL True H1975_Epitope_Rep2 947.53278343859 947.5322349679301 78.605 1 0.06389741827773389 0.0040306852164868024 0.02098760197527519 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 126545 23047 VLLNEILEQV True PC9_epitope_Rep2 1168.67033954056 1168.66924993586 94.142 2 0.06389467993491768 0.0040306852164868024 0.02098883284548049 ['ENSG00000109805|ENST00000251496|NCAPG'] 105574 5763 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.53735490379 27.162 3 0.06388401935216682 0.0040306852164868024 0.020993625349295015 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 93327 8904 RPSSQYIVA True PC9_epitope_Rep1 1019.53999407735 1019.53888993586 39.088 2 0.06386910057139089 0.0040306852164868024 0.02100033382448029 ['SLC7A5|p.F394Sfs*22|1|0.28|ENSG00000103257|chr16:87836607-87836607|A/-|frameshift_variant', 'ENSG00000103257|ENST00000261622|SLC7A5', 'ENST00000437413.2_1_16:21498935-21531497:-|nuORF', 'nc|ENSG00000260727|Q8MH63|SLC7A5P1', 'nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2', 'nc|ENSG00000258186|Q9GIP4|SLC7A5P2', 'ENST00000522841.6_1_16:21495824-21531728:-|nuORF'] 48279 11046 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 47.808 3 0.06386123521460209 0.0040306852164868024 0.02100387140199144 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 1290 7577 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 34.097 2 0.06386066747575893 0.0040306852164868024 0.021004126773278623 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 103497 7970 SPQQPGLSA True PC9_epitope_Rep5 883.4399456829099 883.43884993586 35.597 2 0.06384428449808525 0.0040306852164868024 0.021011497129833995 ['ENSG00000170498|ENST00000367194|KISS1'] 142326 11274 YYEEQHPEL True PC9_epitope_Rep1 1206.5193182024198 1206.51822993586 48.245 2 0.06384171605446222 0.0040306852164868024 0.02101265283329623 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 75332 22462 NIPPYFVAL True PC9_epitope_Rep2 1032.56441792004 1032.56332993586 91.889 2 0.06384104424279645 0.0040306852164868024 0.021012955132997984 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 1210 7620 AEDDLNTVA True H1975_Epitope_Rep2 946.42435518842 946.4238049679301 34.263 1 0.06383613967210874 0.0040306852164868024 0.021015162196997866 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 71981 5094 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 24.676 1 0.06381998980585109 0.0040306852164868024 0.02102243116124266 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 48197 15146 IYPTTYVQF True NCI_RA007_Epitope_Rep4 1130.56481184286 1130.56370993586 65.839 2 0.06380326379492153 0.0040306852164868024 0.021029961872446632 ['ENSG00000179820|ENST00000391770|MYADM'] 103022 21274 SPFQFTVGP True PC9_epitope_Rep1 978.4810822188999 978.47998993586 86.657 2 0.06379647310215289 0.0040306852164868024 0.021033020015856208 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 14243 9364 DSLPLVDTHS True NCI_RA007_Epitope_Rep3 1082.52440358286 1082.5233099358602 43.923 2 0.06379579052588263 0.0040306852164868024 0.021033327432074953 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000487938.5_1_10:17278234-17279267:+|nuORF'] 76941 5543 NRDRTQIAL True PC9_epitope_Rep4 1085.59415490853 1085.59304993586 28.085 2 0.0637953842895567 0.0040306852164868024 0.021033510393267733 ['ENSG00000241685|ENST00000262942|ARPC1A'] 4008 15265 AHEPTYFTV True PC9_epitope_Rep5 1063.49746055903 1063.49636993586 63.726 2 0.06379105931905586 0.0040306852164868024 0.021035458368921876 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 17480 7096 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.53465490379 32.104 3 0.06377810536454458 0.0040306852164868024 0.021041293845423036 ['ENSG00000162378|ENST00000294353|ZYG11B'] 75823 20297 NLPDEEIFQQL True PC9_epitope_Rep6 1344.6561460284 1344.65504993586 90.777 2 0.06376487990362723 0.0040306852164868024 0.021047253159187335 ['ENSG00000169019|ENST00000381571|COMMD8'] 41206 15597 HVLDDFVKV True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 67.913 2 0.06375734518622916 0.0040306852164868024 0.021050648949003742 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 92903 12449 RPGEITGYMA True PC9_epitope_Rep1 1093.52262976105 1093.5215299358601 52.75 2 0.06375618848857532 0.0040306852164868024 0.021051170300585818 ['ENSG00000179820|ENST00000391770|MYADM'] 1297 7711 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 34.644 2 0.06374129497408089 0.0040306852164868024 0.021057884223872822 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 35767 18001 GTIGLIHAI True PC9_epitope_Rep5 893.53345214493 893.53234993586 74.258 2 0.06374104871829073 0.0040306852164868024 0.021057995251253313 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 1298 7900 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 35.361 2 0.06372698008918634 0.0040306852164868024 0.02106433915188989 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 71754 5341 MEERAQLEA True H1975_Epitope_Rep2 1075.4968089360298 1075.49570993586 25.593 2 0.06371999466966494 0.0040306852164868024 0.021067489704402035 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2'] 142644 15248 YYPAKIEAI True PC9_epitope_Rep1 1066.5698972233 1066.5688099358601 63.471 2 0.06371995794484601 0.0040306852164868024 0.02106750626911017 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 97763 8169 SEITDTVAA True H1975_Epitope_Rep3 905.43419159613 905.43364496793 36.401 1 0.06370674167626494 0.0040306852164868024 0.021073468233868343 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 26551 12043 FIIPNVVK True H1975_Epitope_Rep3 928.57458868092 928.57348993586 51.484 2 0.06369962597527565 0.0040306852164868024 0.021076678823479245 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 37861 19417 GYNVKFDMF True PC9_epitope_Rep4 1119.5059170677498 1119.50480993586 82.799 2 0.0636929907751125 0.0040306852164868024 0.02107967301567094 ['ENST00000589115.5_1_19:1105440-1106426:+|nuORF', 'ENST00000588919.5_1_19:1105440-1106636:+|nuORF', 'nc|ENSG00000167468|P36969-2|GPX4', 'ENSG00000167468|ENST00000354171|GPX4'] 38875 3835 HHEAGVTAL True PC9_epitope_Rep4 933.4668291370899 933.4657299358599 20.921 2 0.06368835111204334 0.0040306852164868024 0.02108176693567155 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 88023 14151 QRPPTIVL True PC9_epitope_Rep3 922.5600012459399 922.55890993586 59.515 2 0.06368276261279716 0.0040306852164868024 0.021084289326502897 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 96427 18215 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41156993586 75.276 2 0.06367774232347763 0.0040306852164868024 0.021086555489211956 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 5094 15494 ALLGDLTKA True PC9_epitope_Rep2 900.52803241132 900.52692993586 64.872 2 0.06367191812071674 0.0040306852164868024 0.021089184818571777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 107305 7412 SVLDSSALK True NCI_RA007_Epitope_Rep5 918.5022115863 918.50110993586 35.188 2 0.06366823122853196 0.0040306852164868024 0.02109084941680188 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25573299-25581087:+|nuORF', 'nc|ENSG00000197077|Q9BY89-2|KIAA1671'] 9699 11648 AYGHFSYEF True NCI_RA007_Epitope_Rep3 1119.46616043075 1119.4650699358601 52.937 2 0.06366135527410248 0.0040306852164868024 0.02109395416899637 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 108325 13749 SYKDSTLIM True PC9_epitope_Rep5 1056.51614739828 1056.5150499358601 57.907 2 0.06365269117761703 0.0040306852164868024 0.0210978669305259 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 78026 4682 NVSDAVAQSTR True H1975_Epitope_Rep3 1146.5629143499002 1146.56180993586 23.133 2 0.06365186607514192 0.0040306852164868024 0.02109823958675015 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 138258 10820 YGYHDFGSS True PC9_epitope_Rep3 1031.3984747937498 1031.39736993586 46.588 2 0.063642382321952 0.0040306852164868024 0.021102523341622013 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 63448 17216 LLVTKNWL True PC9_epitope_Rep4 985.5960524014899 985.59494993586 74.23 2 0.06362809548900841 0.0040306852164868024 0.021108978122571644 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.Q2131L|1|0.19|ENSG00000179869|chr7:48276058-48276058|A/T|missense_variant'] 39431 5000 HKVPGDVSL True NCI_RA007_Epitope_Rep3 950.5185303567799 950.51742993586 26.665 2 0.06362772713184077 0.0040306852164868024 0.021109144569980844 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 134658 16510 VYSQIPAAVKL True PC9_epitope_Rep4 1187.6914093383098 1187.6903099358601 71.476 2 0.0636270404779078 0.0040306852164868024 0.02110945484750459 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 118399 14862 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47107496793 61.986 1 0.0636220747877966 0.0040306852164868024 0.021111698812484626 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 25973 21041 FGANAILGV True PC9_epitope_Rep5 860.4756029156399 860.4745099358599 85.994 2 0.06361738891457998 0.0040306852164868024 0.021113816530211157 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 130137 8620 VSDSGISTDY True H1975_Epitope_Rep2 1042.44548455582 1042.44438993586 38.114 2 0.06361688195554255 0.0040306852164868024 0.021114045655226746 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 137014 23767 YALDLSTFL True PC9_epitope_Rep1 1041.53826274185 1041.5371699358602 96.215 2 0.06360953047741956 0.0040306852164868024 0.021117368482388297 ['ENSG00000137331|ENST00000259874|IER3'] 1138 6114 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 28.529 2 0.06360417070294579 0.0040306852164868024 0.021119791372373062 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 30212 13958 FYSGSPTSY True PC9_epitope_Rep5 1007.4236269124299 1007.42252993586 58.711 2 0.06360209626943043 0.0040306852164868024 0.021120729189882146 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1'] 87159 18583 QPFGDHIISV True PC9_epitope_Rep5 1111.56620882519 1111.5651099358602 76.504 2 0.06359326165708888 0.0040306852164868024 0.021124723600792077 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 1224 5886 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54616993586 27.627 2 0.06359111332654091 0.0040306852164868024 0.021125695034308726 ['ENSG00000154124|ENST00000284274|OTULIN'] 120415 5682 VEEPENPAA True H1975_Epitope_Rep3 954.4294405688598 954.42834993586 26.884 2 0.06359062836813992 0.0040306852164868024 0.021125914328774947 ['ENSG00000171316|ENST00000423902|CHD7'] 112796 23990 TLIEDILGV True PC9_epitope_Rep3 971.5539128059899 971.5533649679301 97.563 1 0.06358576518645924 0.0040306852164868024 0.021128113537444926 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 138395 5148 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 25.179 2 0.06357489944657693 0.0040306852164868024 0.021133027956451268 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 87564 10202 QQLGKVVQV True PC9_epitope_Rep3 997.5920296502098 997.59092993586 44.193 2 0.06356327518623694 0.0040306852164868024 0.021138286602092098 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 47254 14122 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.4580849679301 59.331 1 0.06355346735194374 0.0040306852164868024 0.021142724454896115 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 75016 8393 NHSDYNM[Oxidation]VL True PC9_epitope_Rep4 1107.46550918819 1107.4644099358602 39.745 2 0.06354768637851076 0.0040306852164868024 0.021145340631613944 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 24484 5729 FAEGQGRAL True PC9_epitope_Rep6 947.4824792012298 947.48138993586 30.191 2 0.0635389516643672 0.0040306852164868024 0.021149294084445772 ['ENSG00000103335|ENST00000301015|PIEZO1'] 126012 19675 VLDSEGYLLFY True H1975_Epitope_Rep3 1317.6492697428098 1317.64867496793 82.41 1 0.06353837773834085 0.0040306852164868024 0.021149553875020124 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 23832 17356 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.66355490379 74.763 3 0.06353376781132958 0.0040306852164868024 0.02115164068822248 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 21664 15562 ERSDTFINL True PC9_epitope_Rep6 1093.54038800017 1093.53928993586 72.059 2 0.06350789491246671 0.0040306852164868024 0.021163356282198606 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 75187 18362 NIANHFFTV True PC9_epitope_Rep4 1061.52942939365 1061.52832993586 78.696 2 0.06350771051977101 0.0040306852164868024 0.021163439798987473 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 49021 11453 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 50.702 2 0.06350680254499647 0.0040306852164868024 0.021163851051443517 ['ENSG00000197747|ENST00000368811|S100A10'] 35235 14305 GRAPQVLVL True PC9_epitope_Rep4 951.5865503469499 951.5860049679301 62.924 1 0.063494414108844 0.004052263812764631 0.02116946292367837 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 43869 6165 IHSSSTVL True PC9_epitope_Rep3 842.44978209062 842.44868993586 28.757 2 0.06348980728449999 0.004052263812764631 0.021171550129318765 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 32333 21019 GFGFVLFK True PC9_epitope_Rep2 913.5061747679299 913.50506993586 86.302 2 0.06347147908795368 0.004052263812764631 0.021179855918164472 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 62735 11763 LLLPGELAK True NCI_RA007_Epitope_Rep2 952.5957180483199 952.59462993586 50.354 2 0.06346532783273794 0.004052263812764631 0.02118264415093352 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 85918 14070 QHGGFVVTV True PC9_epitope_Rep5 942.4923156089399 942.49120993586 59.134 2 0.06346074454986228 0.004052263812764631 0.021184721873724586 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 6186 8128 APNLQNQQV True PC9_epitope_Rep6 1010.5145076055 1010.51340993586 40.801 2 0.0634600168167091 0.004052263812764631 0.02118505179148276 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 30450 9677 GAFGKPSSL True PC9_epitope_Rep5 862.45486747106 862.45376993586 42.191 2 0.06345381988530649 0.004052263812764631 0.021187861360307533 ['ENSG00000099812|ENST00000215582|MISP'] 31414 5921 GEAAGSPVP True H1975_Epitope_Rep2 783.37628279719 783.37573496793 27.762 1 0.06345289007865561 0.004052263812764631 0.021188282946082028 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 92179 7258 RLFVGSIPK True NCI_RA007_Epitope_Rep3 1015.6178504752298 1015.61674993586 35.66 2 0.06344970591622973 0.004052263812764631 0.021189726742671357 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 110360 7904 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 35.35 2 0.06344027437049088 0.004052263812764631 0.02119400382227516 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 22434 12852 ETERFRELLLY True H1975_Epitope_Rep3 1467.7721788401498 1467.7705349037901 54.657 3 0.0634299949077295 0.004052263812764631 0.021198666320845733 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 6890 9615 AQIEGGVHGL True PC9_epitope_Rep2 979.50869394907 979.50758993586 42.326 2 0.06342492014246978 0.004052263812764631 0.021200968449312966 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 85785 5075 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 24.895 2 0.06342054475346418 0.004052263812764631 0.021202953494786205 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 103851 8389 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 37.234 2 0.06340210634774823 0.004052263812764631 0.02121132057981772 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 14118 15275 DSDAPLFY True H1975_Epitope_Rep2 926.4021631918599 926.40106993586 63.913 2 0.06340024444360198 0.004052263812764631 0.021212165653282263 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 24420 17549 FADFDGVLY True H1975_Epitope_Rep2 1045.4756624852898 1045.47456993586 72.809 2 0.06339715043616495 0.004052263812764631 0.021213570016916764 ['ENSG00000163466|ENST00000315717|ARPC2', 'ENST00000489598.5_1_2:219082193-219099125:+|nuORF', 'ENST00000491780.5_1_2:219082193-219100082:+|nuORF', 'ENST00000465395.5_1_2:219082193-219103574:+|nuORF'] 7371 14476 ARSDKPIFTL True PC9_epitope_Rep1 1146.6397081186199 1146.63805490379 60.508 3 0.06339024659905731 0.004052263812764631 0.021216703961226054 ['ENSG00000136045|ENST00000412830|PWP1'] 75597 13399 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.5015099358602 56.651 2 0.06338954425639452 0.004052263812764631 0.021217022808078353 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 49906 11299 KIIEENITSA True PC9_epitope_Rep5 1116.6026539035602 1116.60154993586 48.455 2 0.06337908336233342 0.004052263812764631 0.02122177232413255 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 98017 11061 SEQFETVAV True H1975_Epitope_Rep1 1008.4763907612798 1008.47587496793 47.507 1 0.06337241969114235 0.004052263812764631 0.021224798310275055 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 124864 14424 VHLETILGA True PC9_epitope_Rep6 951.5389314481898 951.53782993586 67.377 2 0.06336575476652159 0.004052263812764631 0.021227825260601203 ['ENSG00000165591|ENST00000374900|FAAH2'] 108588 23161 SYPAFWTSF True PC9_epitope_Rep5 1104.4916469026 1104.4905499358601 94.077 2 0.06335648141511403 0.004052263812764631 0.02123203751450511 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 37994 16686 HALGLLYHV True PC9_epitope_Rep1 1021.5709002828102 1021.56980993586 69.01 2 0.06334254910745502 0.004052263812764631 0.021238367453889056 ['ENSG00000181789|ENST00000314797|COPG1'] 45796 7919 ISDAPAPAY True H1975_Epitope_Rep1 903.43379767331 903.43324496793 35.411 1 0.06332785921808791 0.004052263812764631 0.021245043459855246 ['ENSG00000168476|ENST00000306306|REEP4'] 65004 19144 LQIDDNVTSAV True PC9_epitope_Rep1 1173.5877321154103 1173.5866299358602 78.431 2 0.06331363489086542 0.004052263812764631 0.021251509715295797 ['ENSG00000025772|ENST00000372813|TOMM34'] 17688 20632 EHLTMLQVL True PC9_epitope_Rep1 1082.57941636118 1082.57830993586 84.181 2 0.06330740014445717 0.004052263812764631 0.0212543445444791 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 93035 11319 RPLLKAITA True PC9_epitope_Rep3 981.63350053937 981.63240993586 48.546 2 0.06330596214606653 0.004052263812764631 0.021254998426084474 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 21147 7413 ERAQGVVL True PC9_epitope_Rep2 870.4923156089399 870.49120993586 33.891 2 0.06329117514561261 0.004052263812764631 0.02126172338729346 ['ENSG00000136950|ENST00000353214|ARPC5L'] 97283 9289 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39686496793 40.725 1 0.06328926790203598 0.004052263812764631 0.021262590921935345 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 128519 7158 VPSSPLRAA True PC9_epitope_Rep2 896.50796567308 896.50686993586 32.926 2 0.06328460016313535 0.004052263812764631 0.021264714240564902 ['ENST00000372409.7_1_20:44563346-44566100:+|nuORF'] 128736 6644 VPYGVGKAA True PC9_epitope_Rep1 860.4756029156398 860.4745099358599 30.36 2 0.0632695450611576 0.004052263812764631 0.021271564013228658 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 34670 19899 GQDGLYIGV True PC9_epitope_Rep2 920.4603467743199 920.4597949679301 81.937 1 0.06326373911601128 0.004052263812764631 0.021274206142477756 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 32023 6870 GEQRSRFLAV True H1975_Epitope_Rep3 1161.6254550368099 1161.62380490379 31.384 3 0.06326125963798783 0.004052263812764631 0.021275334577644363 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 15704 20862 EAVVDIIVLY True H1975_Epitope_Rep2 1132.6379767831197 1132.6368699358602 86.381 2 0.0632483219668039 0.004052263812764631 0.02128122352931717 ['ENST00000310389.5_1_5:175799850-175800087:+|nuORF'] 46706 16157 ITDVIIGFQ True NCI_RA007_Epitope_Rep2 1004.5542471591598 1004.5536749679301 67.573 1 0.06324588955081166 0.004052263812764631 0.021282330879699708 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 6518 6277 APTGDLPRA True PC9_epitope_Rep2 896.4715801643599 896.47048993586 29.54 2 0.06324458050378112 0.004052263812764631 0.02128292684141627 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 76566 21889 NQLDSLMGL True PC9_epitope_Rep2 989.48518162317 989.48408993586 89.673 2 0.06322807523062457 0.004052263812764631 0.021290442404877218 ['ENSG00000135148|ENST00000412615|TRAFD1'] 105070 9292 SRDQSTPII True PC9_epitope_Rep3 1015.5298233164699 1015.52872993586 40.682 2 0.06322215535196007 0.004052263812764631 0.021293138572842707 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 26956 11907 FLDTNETPY True H1975_Epitope_Rep1 1098.48695544498 1098.48637496793 50.801 1 0.06321823770684548 0.004052263812764631 0.02129492300910764 ['ENSG00000079246|ENST00000392132|XRCC5'] 79248 6555 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 31.825 2 0.0631969307970491 0.004052263812764631 0.021304630424633056 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 53060 10480 KPNPNQIISV True PC9_epitope_Rep6 1108.62405805448 1108.62296993586 51.072 2 0.06319680080500815 0.004052263812764631 0.021304689661354455 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 30446 6790 GAFGKPSSL True H1975_Epitope_Rep3 862.45486747106 862.45376993586 31.073 2 0.06319498379185896 0.004052263812764631 0.021305517680912777 ['ENSG00000099812|ENST00000215582|MISP'] 95811 9569 RYIPTAAAF True NCI_RA007_Epitope_Rep3 1008.5392658013599 1008.5386749679301 44.726 1 0.06318241925090694 0.004073478283431063 0.02131124419413128 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 39914 18398 HPFPGPGLAI True PC9_epitope_Rep2 1004.5443511817998 1004.54324993586 76.099 2 0.06316202520236833 0.004073478283431063 0.02132054214282775 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS', 'KPNA1-GMPS|1|fusion'] 26217 15806 FHDMGGVQL True PC9_epitope_Rep5 1002.4593012284997 1002.4582099358599 65.787 2 0.0631561719032903 0.004073478283431063 0.021323211433934914 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 140425 7943 YRGGSISV True PC9_epitope_Rep1 837.43446637965 837.43336993586 35.375 2 0.06312538513863486 0.004073478283431063 0.021337256214651358 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 52817 9146 KPAEFTVDA True PC9_epitope_Rep2 976.4865615221598 976.48546993586 40.52 2 0.06312339467957774 0.004073478283431063 0.021338164544141818 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 131759 18984 VTPPGFQLV True PC9_epitope_Rep6 956.53311779176 956.53202993586 85.665 2 0.06312273704894482 0.004073478283431063 0.021338464656203992 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 36906 20412 GVLPNIQAV True PC9_epitope_Rep5 909.5283667644899 909.52781496793 83.552 1 0.06311002704542343 0.004073478283431063 0.021344265669760408 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 39993 9849 HPNQPLTITA True PC9_epitope_Rep2 1090.57710786206 1090.5760099358602 43.219 2 0.06310506926970606 0.004073478283431063 0.021346528855219486 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 97303 9841 SEALPSDIA True H1975_Epitope_Rep3 901.43927697657 901.43872496793 42.882 1 0.0630963815583139 0.004073478283431063 0.021350495256257613 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 89436 20532 QYEEQFVTL True PC9_epitope_Rep2 1155.5448046742697 1155.54427496793 84.409 1 0.0630956683116894 0.004073478283431063 0.021350820921117418 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 40609 13614 HRIQDLEQL True PC9_epitope_Rep1 1150.6094706195 1150.60783490379 57.222 3 0.06309096501251653 0.004073478283431063 0.021352968537901695 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 108207 14762 SYGSVFKAI True PC9_epitope_Rep6 970.5123823471799 970.51128993586 68.735 2 0.06307780743096784 0.004073478283431063 0.021358977592216843 ['ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 97331 4107 SEAPPTNQATA True H1975_Epitope_Rep2 1085.49891711101 1085.4978299358602 20.89 2 0.06305628409476935 0.004073478283431063 0.02136881061327456 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 7018 5169 AQMREATTL True NCI_RA007_Epitope_Rep3 1019.50697969691 1019.50588993586 27.324 2 0.06305529934878171 0.004073478283431063 0.021369260597410296 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 90482 4709 RELEDATETA True H1975_Epitope_Rep3 1133.52004647841 1133.51894993586 23.239 2 0.06305384929206227 0.004073478283431063 0.021369923223169777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 88027 13872 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 58.378 2 0.06305038145621185 0.004073478283431063 0.02137150798041409 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 79237 6570 PAPPPPPPP True H1975_Epitope_Rep2 865.46978925921 865.46868993586 30.182 2 0.0630433699247083 0.004073478283431063 0.02137471249028857 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 121977 11393 VFTSRSAAF True PC9_epitope_Rep1 984.5028802926398 984.50178993586 48.703 2 0.06304203707301789 0.004073478283431063 0.02137532169884304 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 103866 6528 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 33.782 2 0.06303106957310432 0.004073478283431063 0.02138033523382452 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 142615 11579 YYMIGEQKF True NCI_RA007_Epitope_Rep4 1177.5477818797299 1177.54668993586 51.486 2 0.06302380746300339 0.004073478283431063 0.021383655528760315 ['ENSG00000166741|ENST00000299964|NNMT'] 107914 18235 SVVSPSSFENV True PC9_epitope_Rep4 1150.5506183307 1150.5495299358602 78.211 2 0.06300040519728677 0.004073478283431063 0.021394358441255153 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42'] 108051 18679 SYAELGTTI True PC9_epitope_Rep1 953.47057710485 953.46948993586 76.638 2 0.06299901128213302 0.004073478283431063 0.021394996096166855 ['ENSG00000151012|ENST00000280612|SLC7A11'] 138091 15825 YGGLIFNSY True H1975_Epitope_Rep3 1032.4916469026 1032.4905499358601 66.32 2 0.06299702226101053 0.004073478283431063 0.02139590601600002 ['ENSG00000198712|ENST00000361739|MT-CO2'] 120456 5942 VEERITQVA True H1975_Epitope_Rep2 1043.56112344475 1043.56002993586 27.838 2 0.06297945546646955 0.004073478283431063 0.021403943855049394 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'CHD3|p.A1188S|1|0.15|ENSG00000170004|chr17:7903338-7903338|G/T|missense_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 30144 22907 FYPALADLF True PC9_epitope_Rep4 1055.5327834385898 1055.5322749679299 96.331 1 0.06297471177506346 0.004073478283431063 0.021406114845690875 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 28070 22304 FQTDLIYNL True PC9_epitope_Rep1 1125.5706254992901 1125.5695299358601 90.605 2 0.06296511288713266 0.004073478283431063 0.02141050847433736 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 4950 3884 ALGGEDVR True NCI_RA007_Epitope_Rep4 815.4137309350699 815.41262993586 21.154 2 0.06295825092299638 0.004073478283431063 0.021413649856443975 ['CON__P12763'] 43842 11798 IHSPVVNEL True PC9_epitope_Rep4 1006.54474510462 1006.54364993586 53.15 2 0.06295146504331656 0.004073478283431063 0.021416756821913602 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 7927 7216 ATAPPAPAY True NCI_RA007_Epitope_Rep4 857.42831837005 857.4277649679301 34.389 1 0.06294538449109995 0.004073478283431063 0.021419541198189094 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 17694 14454 EHMATIEAL True PC9_epitope_Rep5 1013.4851816231699 1013.48408993586 60.598 2 0.06293384847949515 0.004073478283431063 0.02142482462121848 ['ENSG00000095906|ENST00000262302|NUBP2'] 2674 7616 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 34.248 1 0.06291936595390674 0.004073478283431063 0.02143145921706895 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 9997 21416 AYPPAPFMHIL True PC9_epitope_Rep1 1255.64235097091 1255.64124993586 87.212 2 0.0629158292189517 0.004073478283431063 0.021433079717621706 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 99227 10815 SHLVATVTV True PC9_epitope_Rep4 925.52328138405 925.52218993586 49.36 2 0.06289292745219194 0.004073478283431063 0.021443575816191 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 37980 14668 HAGVISVL True PC9_epitope_Rep5 794.46503823194 794.46448496793 61.423 1 0.06289280037768238 0.004073478283431063 0.021443634068764223 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 105564 15868 SSDGAISLLTY True H1975_Epitope_Rep1 1125.55536935797 1125.55426993586 66.345 2 0.06289021840393726 0.004073478283431063 0.021444817709747883 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 89823 16247 RALTVPEL True PC9_epitope_Rep5 897.5283667644899 897.52726993586 67.483 2 0.06288398735208231 0.004073478283431063 0.021447674424976117 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 31865 11818 GELGAIAQV True NCI_RA007_Epitope_Rep4 856.4654321547599 856.46432993586 52.438 2 0.06287352001752951 0.004073478283431063 0.02145247410818694 ['ENSG00000113657|ENST00000343218|DPYSL3', 'nc|ENSG00000113657|Q14195|DPYSL3'] 103042 17855 SPFTVGVAA True PC9_epitope_Rep1 847.4439684341899 847.44341496793 73.473 1 0.06286910069841513 0.004073478283431063 0.02145450083411039 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 77282 17162 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.5178299358602 71.293 2 0.0628577781766993 0.004073478283431063 0.02145969420862809 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 67814 21537 LTAEDLFEA True PC9_epitope_Rep3 1007.4811417885498 1007.48057496793 88.138 1 0.06285494733375539 0.004073478283431063 0.021460992829355947 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 73409 17720 MTPEIIQKL True PC9_epitope_Rep5 1071.59981745259 1071.59872993586 73.176 2 0.0628485325055016 0.004073478283431063 0.02146393583322075 ['ENSG00000110107|ENST00000227524|PRPF19'] 61139 8129 LIIYSRNQ True H1975_Epitope_Rep2 1005.5607295219299 1005.55962993586 36.218 2 0.06282910166229319 0.004073478283431063 0.021472852594662778 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 140770 12172 YSDGLGGNSLY True H1975_Epitope_Rep2 1144.5036681382799 1144.50307496793 51.903 1 0.06282442295436591 0.004073478283431063 0.021475000147012806 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 17545 17654 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.52857496793 75.932 1 0.06281818104278064 0.004073478283431063 0.021477865524110164 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 78173 18923 NYASTFTWW True NCI_RA007_Epitope_Rep4 1174.5083595959 1174.5072699358602 81.826 2 0.06281559412329177 0.004073478283431063 0.021479053163394705 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 25669 7712 FEQEMATAA True NCI_RA007_Epitope_Rep5 996.4222470134398 996.42114993586 36.365 2 0.06281061474888112 0.0040948555138007 0.02148133933347231 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 115313 15599 TRHPFLTAL True PC9_epitope_Rep5 1054.59236400338 1054.59126993586 65.012 2 0.06280940946551629 0.0040948555138007 0.021481892746224845 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 111259 19594 THLESLVEL True PC9_epitope_Rep3 1039.5549754351498 1039.5538699358601 80.605 2 0.06279791418936295 0.0040948555138007 0.021487171523137893 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 54996 11398 KYQIINEEF True NCI_RA007_Epitope_Rep5 1182.5920892198599 1182.59098993586 50.493 2 0.06279019774771039 0.0040948555138007 0.021490715676488133 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S160T|1|0.49|ENSG00000163755|chr3:149140265-149140265|G/C|missense_variant'] 95053 11286 RTSTGIIGV True PC9_epitope_Rep3 902.5185303567799 902.51742993586 48.418 2 0.06278797553429945 0.0040948555138007 0.021491736435840823 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 24423 18824 FADGFVLVY True H1975_Epitope_Rep2 1029.51713337445 1029.51657496793 78.161 1 0.06277265793307395 0.0040948555138007 0.021498773682832772 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 31529 4321 GEDLTRHHDEL True H1975_Epitope_Rep2 1320.6058417910401 1320.6041849037902 21.735 3 0.0627685183534878 0.0040948555138007 0.021500675859430173 ['ENSG00000142552|ENST00000270645|RCN3'] 35065 9127 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 40.053 2 0.06276762312838985 0.0040948555138007 0.021501087244201425 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 8255 12678 ATGSWDSFLK True NCI_RA007_Epitope_Rep4 1110.53457434374 1110.53346993586 55.806 2 0.06275431238690668 0.0040948555138007 0.02150720480775799 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 4518 5506 AKFSRPAQL True NCI_RA007_Epitope_Rep4 1016.5767139392399 1016.57560993586 27.77 2 0.06275228813869142 0.0040948555138007 0.021508135283537722 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 115090 16053 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61278993586 66.735 2 0.06274952334987005 0.0040948555138007 0.021509406219277837 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 48547 10048 KALSDHHIYL True PC9_epitope_Rep1 1195.63495709135 1195.63330490379 43.518 3 0.06274213655946421 0.0040948555138007 0.021512802162943448 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 37572 18428 GVVPQLVKL True PC9_epitope_Rep4 951.6117024656298 951.61060993586 78.952 2 0.06272479102469726 0.0040948555138007 0.021520778386739388 ['ENSG00000182481|ENST00000330459|KPNA2'] 117074 5852 TVINQTQKENL True NCI_RA007_Epitope_Rep5 1286.6830294825797 1286.6819299358601 29.194 2 0.06271560858966212 0.0040948555138007 0.02152500196016517 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 46554 8221 ITADVNHNL True PC9_epitope_Rep2 995.50360856863 995.50250993586 36.98 2 0.06271046771379495 0.0040948555138007 0.021527366899842755 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 71995 5406 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 25.856 1 0.06270686932605465 0.0040948555138007 0.021529022395264434 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 60513 17468 LHAQPIISI True PC9_epitope_Rep1 990.58621599378 990.58510993586 71.988 2 0.06270509122014127 0.0040948555138007 0.02152984048409024 ['ENST00000533407.6_1_11:6422737-6440257:-|nuORF', 'ENST00000529778.5_1_11:6422476-6423430:-|nuORF', 'ENST00000526925.6_1_11:6422737-6426086:-|nuORF', 'nc|ENSG00000166313|O00213-4|APBB1', 'nc|ENSG00000166313|O00213-6|APBB1', 'nc|ENSG00000166313|O00213-3|APBB1', 'nc|ENSG00000166313|O00213-5|APBB1', 'nc|ENSG00000166313|O00213-2|APBB1', 'ENSG00000166313|ENST00000609360|APBB1'] 64769 10072 LQAETSQQL True PC9_epitope_Rep3 1016.51383889916 1016.51274993586 43.696 2 0.06270235137279205 0.0040948555138007 0.021531101116208207 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 26855 14631 FLDDSTALY True H1975_Epitope_Rep1 1043.48114178855 1043.48057496793 61.488 1 0.06270008063775895 0.0040948555138007 0.021532145956032693 ['ENSG00000100558|ENST00000216446|PLEK2'] 86735 21654 QLLDLDPEV True PC9_epitope_Rep1 1040.5389910178399 1040.53847496793 88.12 1 0.06269536306005632 0.0040948555138007 0.02153431681677713 ['ENSG00000113384|ENST00000265070|GOLPH3'] 26224 10557 FHDPDSAVV True PC9_epitope_Rep1 985.4505103666099 985.44940993586 45.499 2 0.06267837579816404 0.0040948555138007 0.021542135405370495 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 128813 14791 VQAPRLAAL True PC9_epitope_Rep1 937.5709002828098 937.56980993586 61.713 2 0.06267737502652491 0.0040948555138007 0.021542596103311894 ['nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'ENSG00000033100|ENST00000035307|CHPF2'] 1691 9081 AEGGMTAVV True H1975_Epitope_Rep2 833.3953039896099 833.39475496793 39.882 1 0.06266358170460722 0.0040948555138007 0.021548946676269738 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1'] 85799 4544 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 24.733 2 0.06265836225233837 0.0040948555138007 0.02155135020663849 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 21924 11540 ESDSTIVYY True H1975_Epitope_Rep3 1075.47097102767 1075.47037496793 49.514 1 0.06264289659974856 0.0040948555138007 0.021558473497404786 ['ENST00000423257.1_1_17:17360441-17360570:+|nuORF', 'ENST00000485209.5_1_1:184027321-184041978:+|nuORF', 'ENSG00000198860|ENST00000645668|TSEN15'] 74560 20217 NFTNVAATF True PC9_epitope_Rep5 983.4712458111899 983.4706949679301 82.812 1 0.06264104851328046 0.0040948555138007 0.021559324847409352 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 133492 24212 VWFPDMMPTW True PC9_epitope_Rep1 1308.5671374253197 1308.5660299358601 97.946 2 0.06263979255590292 0.0040948555138007 0.021559903441404755 ['ENSG00000005812|ENST00000355619|FBXL3'] 140047 19863 YQGSSFVL True PC9_epitope_Rep1 899.4388830537499 899.43833496793 81.22 1 0.0626384131094545 0.0040948555138007 0.021560538940657053 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 99322 13295 SHSPPLLQV True PC9_epitope_Rep2 976.53418042092 976.53308993586 56.416 2 0.06262039944047612 0.0040948555138007 0.021568839256705802 ['ENSG00000165030|ENST00000297689|NFIL3'] 29801 22231 FVPQFISQL True PC9_epitope_Rep2 1077.5858816406098 1077.58478993586 90.989 2 0.06261106675954771 0.0040948555138007 0.021573140706378852 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 53103 11530 KPSELLTSV True PC9_epitope_Rep4 972.54916177872 972.54806993586 52.112 2 0.06261054069743999 0.0040948555138007 0.021573383192707605 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 38083 6056 HAVGPSTSL True PC9_epitope_Rep2 867.4450310633501 867.44392993586 28.688 2 0.0626047159679406 0.0040948555138007 0.021576068246138183 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 61426 16658 LIVKEWNSV True PC9_epitope_Rep3 1086.60734536118 1086.6062499358602 69.21 2 0.0625833898329087 0.0040948555138007 0.021585901663395718 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 78610 20841 NYSPYVNYF True PC9_epitope_Rep2 1165.50802524273 1165.50747496793 85.611 1 0.06258078993561376 0.0040948555138007 0.02158710074837413 ['ENSG00000156162|ENST00000414645|DPY19L4'] 98761 9997 SGHLETVILG True H1975_Epitope_Rep1 1024.5553097883198 1024.5542099358602 43.389 2 0.06257999848095729 0.0040948555138007 0.02158746578310728 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 35942 2608 GTSSVIVSR True NCI_RA007_Epitope_Rep5 904.4977949122 904.49668993586 14.735 2 0.06257957815159988 0.0040948555138007 0.02158765964971603 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 34780 20148 GQGEVLVYV True PC9_epitope_Rep1 962.5072969667398 962.50618993586 82.328 2 0.06255955889618392 0.0040948555138007 0.02159689488328051 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 115159 8665 TRDPAQRVVL True PC9_epitope_Rep1 1153.6567551650899 1153.65511490379 38.168 3 0.06255498955637129 0.0040948555138007 0.021599003305954045 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 34090 19696 GLYEGLTWL True H1975_Epitope_Rep1 1050.53859709502 1050.53807496793 81.985 1 0.06254088604913713 0.0040948555138007 0.021605512249742862 ['ENSG00000165527|ENST00000298316|ARF6'] 87212 14955 QPITPGPSI True PC9_epitope_Rep3 908.4967322830399 908.49618496793 62.656 1 0.06253441560814353 0.0040948555138007 0.021608499038490915 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 96370 16851 RYVEIVSQF True PC9_epitope_Rep4 1139.5975089534697 1139.59640993586 72.799 2 0.0625330290882276 0.0040948555138007 0.021609139112289077 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 8696 16331 AVANIVNSV True PC9_epitope_Rep1 885.49198125577 885.49088993586 67.636 2 0.06252280572305378 0.0040948555138007 0.021613859167019113 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 35780 15729 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 65.661 2 0.06252023096772497 0.0040948555138007 0.021615048061701628 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 88029 11723 QRPPTIVL True PC9_epitope_Rep6 922.5600012459399 922.55890993586 56.239 2 0.06251569896032581 0.004114055061063962 0.021617140863783267 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 74795 11085 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.4657899358601 47.526 2 0.06249672597019483 0.004114055061063962 0.021625904270710178 ['ENSG00000144597|ENST00000396842|EAF1'] 24669 20876 FALPGLLHA True PC9_epitope_Rep1 937.5385375253701 937.53744993586 85.122 2 0.06249640857303551 0.004114055061063962 0.021626050900431126 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 127398 8771 VNELTEFAK True H1975_Epitope_Rep3 1049.53932537101 1049.5387749679298 38.744 1 0.06247590907149365 0.004114055061063962 0.021635523093048 ['CON__P02769'] 77850 16633 NVELDPEIQ True PC9_epitope_Rep1 1055.51350454599 1055.51297496793 68.807 1 0.06245908871091232 0.004114055061063962 0.0216432980987294 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 17606 12442 EHINEGETAML True PC9_epitope_Rep5 1242.55505208814 1242.5539499358601 52.859 2 0.06245212319784028 0.004114055061063962 0.021646518569365496 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 103845 7830 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 35.107 2 0.06245060094818601 0.004114055061063962 0.021647222432292994 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 137725 11138 YENDLGITA True H1975_Epitope_Rep2 994.4607406971398 994.4596499358599 47.878 2 0.062447292138090124 0.004114055061063962 0.021648752443197167 ['ENST00000393747.3_1_11:70269077-70281851:+|nuORF', 'nc|ENSG00000085733|Q14247-3|CTTN', 'ENSG00000085733|ENST00000301843|CTTN', 'nc|ENSG00000085733|Q14247-2|CTTN'] 47973 10457 IYKAPSENW True PC9_epitope_Rep6 1106.53965972418 1106.53856993586 50.977 2 0.06243373976476936 0.004114055061063962 0.021655020162023694 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 27813 18103 FQDDRYLYM True PC9_epitope_Rep2 1249.54375912845 1249.5426699358602 74.935 2 0.06242971031197177 0.004114055061063962 0.021656884028242736 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ROCK1|p.G236Lfs*5|1|0.06|ENSG00000067900|chr18:21042679-21042680|-/TCAA|frameshift_variant', 'ROCK1|p.G236Dfs*12|1|0.06|ENSG00000067900|chr18:21042678-21042679|-/AT|frameshift_variant', 'ROCK1|p.V266Yfs*8|1|0.19|ENSG00000067900|chr18:21042589-21042589|C/-|frameshift_variant', 'ENSG00000134318|ENST00000315872|ROCK2'] 99247 17606 SHNPLANIL True PC9_epitope_Rep4 977.52942939365 977.52832993586 75.737 2 0.06242712998716683 0.004114055061063962 0.021658077661897052 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 77312 10416 NSDPNLHLL True NCI_RA007_Epitope_Rep4 1021.5192586327701 1021.51816993586 46.919 2 0.06242406333559696 0.004114055061063962 0.021659496343853196 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 5848 19047 APFLASAVSA True PC9_epitope_Rep2 932.4967322830399 932.49562993586 78.629 2 0.062423199225996075 0.004114055061063962 0.021659896110078784 ['ENSG00000146242|ENST00000369750|TPBG'] 39542 9346 HLGALLAR True PC9_epitope_Rep5 849.51847078713 849.51736993586 40.902 2 0.06241467806273522 0.004114055061063962 0.02166383864847033 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 132452 15522 VVDAVVTQV True PC9_epitope_Rep3 928.5229470308799 928.52184993586 64.855 2 0.06240924950311452 0.004114055061063962 0.02166635065506252 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 103727 5282 SPVFTSRSAA True PC9_epitope_Rep6 1021.51925863277 1021.51816993586 28.114 2 0.06236597157453446 0.004114055061063962 0.02168638656372004 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 96919 12432 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 52.683 2 0.062362626136142366 0.004114055061063962 0.021687936069365192 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 78174 19614 NYASTFTWW True NCI_RA007_Epitope_Rep5 1174.5083595959 1174.5072699358602 82.348 2 0.06236235268817099 0.004114055061063962 0.021688062726647698 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 137446 6100 YEDIRVSRV True H1975_Epitope_Rep2 1135.59857158263 1135.59691490379 28.44 3 0.06236052746131222 0.004114055061063962 0.021688908163555776 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 6327 9330 APRPTIINA True PC9_epitope_Rep3 951.5501648382299 951.54906993586 40.827 2 0.0623454291793639 0.004114055061063962 0.021695902774947488 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 142624 13781 YYNKVSTVF True PC9_epitope_Rep2 1119.5600608155898 1119.5589699358602 58.292 2 0.062305368099028244 0.004114055061063962 0.02171447194198605 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 40481 11653 HRDIVNLQV True PC9_epitope_Rep2 1092.6039913162401 1092.60288993586 50.153 2 0.062301112725151535 0.004114055061063962 0.021716445251560964 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 90822 9130 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.5496749679298 40.07 1 0.06229830442773153 0.004114055061063962 0.021717747609986984 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 5543 18419 AMLAVLHTV True PC9_epitope_Rep5 953.5368232732101 953.53572993586 75.87 2 0.06229318209048072 0.004114055061063962 0.021720123296802476 ['ENSG00000123395|ENST00000336854|ATG101'] 17241 15637 EHAEALLL True PC9_epitope_Rep5 894.4810822188999 894.48053496793 65.158 1 0.06228954876433749 0.004114055061063962 0.021721808539648984 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 87215 13908 QPITPGPSI True PC9_epitope_Rep4 908.4967322830399 908.49618496793 61.401 1 0.06226971538938265 0.004114055061063962 0.021731009944455343 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 31931 9029 GEMWNNTAA True H1975_Epitope_Rep2 992.4021802752 992.40108993586 39.682 2 0.062256383579141636 0.004114055061063962 0.021737197044194457 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000446155.1_1_1:45997278-45997635:+|nuORF', 'ENST00000507778.1_1_4:41844266-41844645:-|nuORF', 'nc|ENSG00000124097|B2RPK0|HMGB1P1'] 21670 12302 ERSGIPIVT True PC9_epitope_Rep1 970.5447451046199 970.54364993586 52.175 2 0.062242753366145605 0.004114055061063962 0.021743524291866666 ['ENSG00000125730|ENST00000245907|C3'] 128092 19888 VPLEFPVVA True PC9_epitope_Rep6 969.5535188831699 969.55242993586 89.154 2 0.062237990696725365 0.004114055061063962 0.02174573555553136 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 1056 8537 AEAFGKIVA True H1975_Epitope_Rep3 904.5018176634799 904.50072993586 37.825 2 0.062232302760577715 0.004114055061063962 0.02174837668119439 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 114674 10568 TQFGGKRPFGV True PC9_epitope_Rep2 1192.63529144452 1192.6336349037902 45.966 3 0.06222437283123357 0.004114055061063962 0.021752059338818863 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 107129 11766 SVIDGNLELVK True NCI_RA007_Epitope_Rep4 1185.6605031328502 1185.6594099358601 52.232 2 0.06222393561954401 0.004114055061063962 0.0217522623964086 ['ENSG00000198435|ENST00000356628|NRARP'] 36506 9920 GVGPIRDV True PC9_epitope_Rep1 811.4552018242299 811.45410993586 43.017 2 0.06222248528997978 0.004114055061063962 0.02175293599652823 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 103853 8620 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 38.106 2 0.062221363936407016 0.004114055061063962 0.0217534568180449 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 20581 4392 EPSEVPTPK True NCI_RA007_Epitope_Rep5 982.4971262058599 982.49602993586 23.521 2 0.062204642519650556 0.004114055061063962 0.021761224563447975 ['ENST00000430198.2_1_4:73964637-73964859:+|nuORF', 'nc|ENSG00000137309|P17096-2|HMGA1', 'ENSG00000137309|ENST00000311487|HMGA1', 'nc|ENSG00000137309|P17096-3|HMGA1'] 85753 16462 QHDFTSQIF True PC9_epitope_Rep4 1121.51417325233 1121.5130699358601 71.29 2 0.062198820029703526 0.004114055061063962 0.02176392993006126 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 97841 11959 SELPGAFEA True H1975_Epitope_Rep3 919.4287122928699 919.42760993586 51.157 2 0.06219863579345192 0.004114055061063962 0.021764015538761658 ['ENSG00000126247|ENST00000246533|CAPNS1'] 117839 19806 TVYEGFISA True PC9_epitope_Rep2 985.4756624852898 985.47511496793 81.573 1 0.06219541767859253 0.004114055061063962 0.021765510943538523 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 120668 10278 VEINENLPA True H1975_Epitope_Rep1 997.5080252427299 997.50692993586 44.479 2 0.06218534141260065 0.004114055061063962 0.021770193824767567 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 70204 14522 LVQGELVTA True PC9_epitope_Rep3 928.5229470308799 928.52184993586 60.981 2 0.06216751582661243 0.004114055061063962 0.021778480407765227 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1'] 105101 5182 SREESAGPAL True PC9_epitope_Rep2 1015.4934378077497 1015.49234993586 25.321 2 0.06216228252349549 0.004114055061063962 0.021780913761206607 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 137991 19811 YFQNTQGLIF True PC9_epitope_Rep6 1229.6080736371698 1229.6069699358602 88.861 2 0.06214974446804441 0.004114055061063962 0.02178674464969989 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 71299 18985 LYQDQILEKF True PC9_epitope_Rep4 1295.6761531969898 1295.6750499358602 81.118 2 0.0621454452133249 0.004114055061063962 0.021788744368889522 ['ENSG00000074935|ENST00000368662|TUBE1', 'ENST00000368657.7_1_6:112400794-112408637:-|nuORF'] 103976 21203 SQAPFIVAL True PC9_epitope_Rep4 944.5331177917599 944.53256496793 89.722 1 0.06214423105884086 0.004114055061063962 0.02178930914085203 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 78698 6983 PAAAAAAAAAA True PC9_epitope_Rep1 825.4344663796498 825.43336993586 31.665 2 0.062141107535897924 0.004114055061063962 0.021790762129581802 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 79267 8984 PAPPPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 39.502 2 0.06213393369292664 0.004114055061063962 0.02179409956605943 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 104074 7801 SQDPYHETL True PC9_epitope_Rep6 1088.4774533904401 1088.47634993586 39.395 2 0.0621308753857627 0.004114055061063962 0.021795522502703907 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 134781 16833 VYTVVDEMF True NCI_RA007_Epitope_Rep4 1101.5052483614097 1101.5041499358601 72.94 2 0.062125856455010356 0.004114055061063962 0.021797857841323865 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 117667 19555 TVTSDLLQV True PC9_epitope_Rep4 974.5284263341399 974.5273299358599 83.34 2 0.06211832786744418 0.004114055061063962 0.021801361366837246 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 142532 10210 YYITTRAQF True NCI_RA007_Epitope_Rep5 1161.58185888933 1161.5807699358602 45.905 2 0.06211551916955685 0.004114055061063962 0.021802668562409235 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 22877 8043 EVDIYTVK True H1975_Epitope_Rep3 965.50696261357 965.50586993586 35.911 2 0.06210772147451297 0.004114055061063962 0.021806298061468336 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'PRMT8|p.T357Pfs*4|1|0.34|ENSG00000111218|chr12:3592317-3592317|G/-|frameshift_variant', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8', 'ENST00000530361.5_1_19:50188842-50191499:+|nuORF'] 72907 10375 MPTQPQVQA True PC9_epitope_Rep5 998.4855159763398 998.48440993586 44.892 2 0.06209971312603531 0.004114055061063962 0.021810026185184305 ['ENSG00000100393|ENST00000263253|EP300'] 12383 8997 DISLSDYK True H1975_Epitope_Rep3 939.45492704071 939.45382993586 39.603 2 0.062096443269926846 0.004114055061063962 0.02181154856752245 ['ENSG00000117450|ENST00000319248|PRDX1'] 103924 11759 SQANIAQVL True NCI_RA007_Epitope_Rep4 942.5134449763399 942.51234993586 52.203 2 0.06209585419702444 0.004114055061063962 0.021811822838892412 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 38538 3289 HESGHAIIA True H1975_Epitope_Rep2 933.4668291370899 933.4657299358599 17.291 2 0.062068383546862255 0.004114055061063962 0.021824616626872805 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 48298 6739 IYQRHVYNL True NCI_RA007_Epitope_Rep4 1204.6352914445197 1204.6341899358601 32.543 2 0.0620653696020085 0.004114055061063962 0.021826020715568332 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 71855 15130 MELITPISA True H1975_Epitope_Rep3 973.5154191222899 973.51432993586 63.597 2 0.0620623013228701 0.004114055061063962 0.021827450201389778 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 99043 12561 SHFEGLITT True PC9_epitope_Rep6 1003.49746055903 1003.49636993586 59.758 2 0.06205080673211728 0.004114055061063962 0.02183280619607129 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 105429 10911 SRTGEMTVL True PC9_epitope_Rep1 992.49608066004 992.49498993586 46.855 2 0.062045616429372834 0.004114055061063962 0.021835225051606445 ['ENSG00000168495|ENST00000306433|POLR3D'] 107403 13793 SVLNLVIVK True NCI_RA007_Epitope_Rep2 983.6379172134699 983.63682993586 58.301 2 0.06204050211647164 0.004114055061063962 0.021837608732681254 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 108376 17454 SYLERHGLINF True PC9_epitope_Rep2 1347.6935345966297 1347.69187490379 72.388 3 0.06203970896186762 0.004114055061063962 0.021837978427789843 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 132528 10721 VVDPNDPQM True PC9_epitope_Rep5 1013.44879611445 1013.44768993586 46.228 2 0.06203144611700017 0.004114055061063962 0.021841830139565248 ['ENSG00000151883|ENST00000281631|PARP8'] 89065 13702 QVMQGMGVSA True PC9_epitope_Rep1 1006.4575869763398 1006.45648993586 57.556 2 0.06202582998763861 0.004114055061063962 0.021844448443282247 ['ENSG00000169813|ENST00000682386|HNRNPF'] 107290 21437 SVLDGLLYV True PC9_epitope_Rep6 977.54334812229 977.54224993586 95.332 2 0.06201479783428733 0.004130098089829634 0.021849592593778104 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 48510 14573 KAINVFVSA True PC9_epitope_Rep3 947.54401682863 947.54290993586 61.182 2 0.062013951596070795 0.004130098089829634 0.021849987229393696 ['ENSG00000114209|ENST00000392750|PDCD10'] 141881 18696 YVDPVITSI True PC9_epitope_Rep6 1005.53826274185 1005.53767496793 84.557 1 0.061996725017706096 0.004130098089829634 0.021858022104843396 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 3915 8405 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 39.794 2 0.061994244784877556 0.004130098089829634 0.02185917916507475 ['ENSG00000075618|ENST00000382361|FSCN1'] 121197 8286 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 36.824 1 0.061994185603133016 0.004130098089829634 0.02185920677479613 ['ENSG00000052749|ENST00000370992|RRP12'] 4324 22180 AIISELVSI True PC9_epitope_Rep2 943.5589981864299 943.5584449679301 90.802 1 0.061993937451687534 0.004130098089829634 0.02185932254381984 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 7220 10823 ARDDTHYLL True PC9_epitope_Rep1 1102.54072235334 1102.5396299358601 46.517 2 0.061985436552243416 0.004130098089829634 0.021863288769869708 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 14155 13261 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.45847496793 56.107 1 0.06198180339638556 0.004130098089829634 0.02186498407531365 ['ENSG00000149823|ENST00000279281|VPS51'] 8170 12202 ATESVSLYY True H1975_Epitope_Rep2 1031.48114178855 1031.48004993586 52.017 2 0.06197629286694217 0.004130098089829634 0.02186755563106989 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 132062 6054 VTTGGMVLK True NCI_RA007_Epitope_Rep5 904.5051887917599 904.50408993586 29.969 2 0.06197509904027901 0.004130098089829634 0.021868112781230492 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 47566 17939 IVVDNVPQV True PC9_epitope_Rep3 981.5494961318899 981.54838993586 74.204 2 0.06191891888750571 0.004130098089829634 0.021894346307460576 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 99193 18485 SHLDYDITL True PC9_epitope_Rep2 1075.5185899264302 1075.51807496793 76.436 1 0.06190725438873753 0.004130098089829634 0.02189979668819831 ['ENSG00000163960|ENST00000296328|UBXN7'] 53159 15972 KQADPFASL True PC9_epitope_Rep5 975.5025459394699 975.50144993586 66.425 2 0.061903191518332915 0.004130098089829634 0.021901695405287025 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 84486 13504 QALLDLHAL True NCI_RA007_Epitope_Rep3 992.5654805492001 992.56438993586 60.408 2 0.061900147445544985 0.004130098089829634 0.021903118102188784 ['ENSG00000087086|ENST00000331825|FTL'] 77343 11672 NSDWHLVNY True H1975_Epitope_Rep2 1146.50942222506 1146.50832993586 49.969 2 0.06188538212824941 0.004130098089829634 0.021910020110422507 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9', 'DOCK9|p.D312Efs*18|1|0.3|ENSG00000088387|chr13:98914352-98914352|A/-|frameshift_variant'] 11882 9886 DHIKDSFHSL True PC9_epitope_Rep1 1197.57783613805 1197.57619490379 42.884 3 0.06187152692362923 0.004130098089829634 0.021916498494536252 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 97502 4600 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 22.798 2 0.06186227649315837 0.004130098089829634 0.021920824762570717 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 104862 6409 SRAPSVATV True PC9_epitope_Rep5 886.4872302285 886.48612993586 29.629 2 0.06185927378629404 0.004130098089829634 0.021922229244776326 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 73445 12364 M[Oxidation]VAPAVASV True PC9_epitope_Rep1 859.4473399429099 859.44624993586 52.417 2 0.06184617473686414 0.004130098089829634 0.021928357137979373 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 53418 6093 KQYAGKYVL True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 30.052 2 0.06184431545593314 0.004130098089829634 0.021929227058718633 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 139205 13878 YLETVAAYY True H1975_Epitope_Rep3 1091.51752729727 1091.51642993586 58.692 2 0.061836226774438556 0.004130098089829634 0.021933011959304922 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 127673 9935 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 43.545 2 0.06182952983272727 0.004130098089829634 0.021936146080536394 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 109165 19665 TAM[Oxidation]DVVYAL True PC9_epitope_Rep3 997.4790339940099 997.47792993586 80.877 2 0.06181644212183955 0.004130098089829634 0.021942272216557302 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 97325 2839 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41357496793 14.57 1 0.06181053330490022 0.004130098089829634 0.021945038545438333 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 71025 13551 LYITEPKTI True PC9_epitope_Rep6 1076.61176203528 1076.6106699358602 63.855 2 0.061803904237828555 0.004130098089829634 0.021948142452494344 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 21667 5855 ERSEPTQAL True PC9_epitope_Rep1 1029.5090878718897 1029.50798993586 27.335 2 0.06180227073755941 0.004130098089829634 0.02194890736268117 ['ENST00000587807.5_1_18:54270260-54293401:-|nuORF', 'ENSG00000091164|ENST00000217515|TXNL1'] 17707 9462 EHNIFHNEV True PC9_epitope_Rep1 1137.5203212619301 1137.51868490379 41.251 3 0.061797869307276966 0.004130098089829634 0.02195096851734304 ['ENSG00000118898|ENST00000345988|PPL'] 97381 12093 SEDPTVPLP True H1975_Epitope_Rep1 953.4705771048499 953.47002496793 51.529 1 0.06179776178294529 0.004130098089829634 0.021951018872339755 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 31975 4709 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 23.205 2 0.06179623884037271 0.004130098089829634 0.021951732096820983 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 2817 7445 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.3740149679301 33.582 1 0.06178212226292514 0.004130098089829634 0.02195834417929805 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 131259 16123 VTFKEYVTV True PC9_epitope_Rep4 1084.580461907 1084.57936993586 69.957 2 0.06177166225868225 0.004130098089829634 0.021963244727044574 ['nc|ENSG00000141582|O00257-3|CBX4', 'ENSG00000141582|ENST00000269397|CBX4'] 35229 15019 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.58544993586 63.023 2 0.06176062944541035 0.004130098089829634 0.021968414719471786 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 34852 7050 GQKPGGSDFL True NCI_RA007_Epitope_Rep3 1004.4927095317599 1004.49160993586 34.85 2 0.061758034790811954 0.004130098089829634 0.0219696307397243 ['nc|ENSG00000128989|P56211-2|ARPP19', 'ENSG00000128989|ENST00000249822|ARPP19', 'nc|ENSG00000143420|O43768-6|ENSA', 'nc|ENSG00000143420|O43768-5|ENSA', 'nc|ENSG00000143420|O43768-2|ENSA', 'ENSG00000143420|ENST00000369014|ENSA', 'nc|ENSG00000143420|O43768-9|ENSA', 'nc|ENSG00000143420|O43768-7|ENSA', 'nc|ENSG00000143420|O43768-3|ENSA', 'nc|ENSG00000143420|O43768-4|ENSA', 'nc|ENSG00000143420|O43768-8|ENSA'] 142375 13198 YYEKLHTYF True PC9_epitope_Rep4 1262.5971746003 1262.59552490379 58.666 3 0.06175690989478141 0.004130098089829634 0.021970157956676072 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 48899 2722 KEDKPPLAP True H1975_Epitope_Rep2 993.5494961318898 993.54838993586 14.564 2 0.06175555840442744 0.004130098089829634 0.021970791389262945 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 114482 5375 TPYKQEINA True PC9_epitope_Rep4 1062.53457434374 1062.53346993586 27.4 2 0.061749720650955985 0.004130098089829634 0.021973527688552884 ['ENSG00000138356|ENST00000374700|AOX1'] 33610 9464 GLGAEVAEV True H1975_Epitope_Rep2 843.4337976733099 843.43324496793 41.371 1 0.061747945352132044 0.004130098089829634 0.021974359876648312 ['ENST00000243878.8_1_16:67700286-67700655:-|nuORF'] 25487 14570 FEFELNQPA True H1975_Epitope_Rep2 1093.50802524273 1093.5069299358602 61.199 2 0.06174212041328068 0.004130098089829634 0.021977090573793732 ['ENSG00000005812|ENST00000355619|FBXL3'] 73026 19956 MRDDTMWQL True PC9_epitope_Rep5 1194.5161644816199 1194.51506993586 81.813 2 0.06173798285145483 0.004130098089829634 0.02197903042661338 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5'] 117842 19092 TVYEGFISA True PC9_epitope_Rep4 985.4756624852898 985.47456993586 81.528 2 0.06173134332168252 0.004130098089829634 0.021982143627664527 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 71139 23753 LYLPSFFTY True PC9_epitope_Rep3 1149.57464825057 1149.5740749679298 96.651 1 0.06172846663350337 0.004130098089829634 0.021983492599444765 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 134044 13377 VYKAFVDNY True PC9_epitope_Rep2 1117.54441075145 1117.5433099358602 56.736 2 0.06172716270056197 0.004130098089829634 0.021984104080500055 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 37799 14405 GYEPPVQESV True PC9_epitope_Rep5 1103.51350454599 1103.51297496793 60.408 1 0.061722750072231956 0.004130098089829634 0.02198617350346781 ['ENSG00000145425|ENST00000274065|RPS3A'] 98863 20602 SGVEVLVSV True PC9_epitope_Rep1 887.4963979298699 887.4958449679301 84.062 1 0.06172012418666456 0.004130098089829634 0.021987405068832403 ['ENSG00000198695|ENST00000361681|MT-ND6'] 20952 14079 EQPETYYKW True PC9_epitope_Rep4 1242.5557037111398 1242.55460993586 62.065 2 0.06171033266591866 0.004130098089829634 0.02199199794051334 ['ENSG00000164880|ENST00000404767|INTS1'] 112185 13120 TKFGGIVVL True NCI_RA007_Epitope_Rep5 932.5695033004798 932.56840993586 57.143 2 0.061705865912258566 0.004130098089829634 0.021994093434592486 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 121856 16425 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 68.315 2 0.061699130282659 0.004130098089829634 0.021997253674019432 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 98291 5771 SEVPEQPSA True NCI_RA007_Epitope_Rep5 942.4294405688601 942.42834993586 28.886 2 0.061698156731676355 0.004130098089829634 0.021997710481362665 ['ENSG00000184557|ENST00000330871|SOCS3'] 17986 14320 EIDLFNIR True H1975_Epitope_Rep3 1018.54474510462 1018.54364993586 60.428 2 0.061697585066146254 0.004130098089829634 0.0219979787209764 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 97948 10577 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.4652749679301 45.707 1 0.06169197254031523 0.004130098089829634 0.0220006124155102 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 6696 17630 AQAGALLQV True PC9_epitope_Rep2 869.49706663621 869.49596993586 73.096 2 0.06168889637770234 0.004130098089829634 0.022002056036093093 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 9989 16146 AYPHNLMTF True PC9_epitope_Rep6 1092.50625142092 1092.5051499358601 74.456 2 0.061683323173602374 0.004130098089829634 0.02200467172014125 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 105261 18584 SRLDSVLLL True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 84.125 2 0.06166910414602545 0.004130098089829634 0.022011346453026853 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 110341 5441 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.4390649679301 25.987 1 0.0616682840643721 0.004130098089829634 0.022011731474236122 ['ENSG00000167470|ENST00000682408|MIDN'] 130116 13308 VSDPVGVLY True H1975_Epitope_Rep1 947.49639792987 947.4958449679301 56.293 1 0.06166582458990478 0.004130098089829634 0.022012886212979203 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 77288 17049 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.51837496793 71.179 1 0.06165926220952926 0.004130098089829634 0.02201596756240278 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 124773 11701 VHDESAFVV True PC9_epitope_Rep4 1001.4818104948898 1001.48070993586 52.77 2 0.06165782649151459 0.004130098089829634 0.022016641752708028 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 120157 2979 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 15.734 2 0.06165154630532304 0.004130098089829634 0.022019591049535797 ['ENSG00000155506|ENST00000518297|LARP1'] 43307 7859 IFVGGIKEN True NCI_RA007_Epitope_Rep4 975.5389314481899 975.53782993586 36.938 2 0.061649300677323444 0.004130098089829634 0.022020645727352278 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 140665 15865 YRTEFTTAL True PC9_epitope_Rep3 1100.55022440788 1100.54912993586 66.175 2 0.06164750341185675 0.004130098089829634 0.0220214898611962 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 134437 22508 VYPNWAIGL True PC9_epitope_Rep1 1031.5440168286298 1031.54347496793 91.378 1 0.06164720566970332 0.004130098089829634 0.02202162970662091 ['ENSG00000131389|ENST00000622186|SLC6A6'] 140516 13661 YRMDGHIQL True PC9_epitope_Rep1 1131.5495132152298 1131.54787490379 57.402 3 0.061646843121419215 0.004130098089829634 0.022021799991694613 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 71842 12701 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 53.955 2 0.061642719331872584 0.004130098089829634 0.022023736976355228 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 133490 21080 VWFPDMMPTW True NCI_RA007_Epitope_Rep4 1308.5671374253197 1308.5660299358601 91.4 2 0.06163583397678047 0.004130098089829634 0.022026971442109838 ['ENSG00000005812|ENST00000355619|FBXL3'] 2709 7131 AETAAVTVAA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 32.454 1 0.06163299217379773 0.004130098089829634 0.02202830653440026 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 49320 5615 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 26.635 2 0.061623571738905966 0.004130098089829634 0.022032732826753294 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 133914 19313 VYIHGGGWAL True PC9_epitope_Rep3 1071.5501648382299 1071.5490699358602 79.51 2 0.06162037261786177 0.004130098089829634 0.022034236152669057 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1'] 134284 14505 VYNPELDKW True PC9_epitope_Rep6 1162.5658744720197 1162.56476993586 67.676 2 0.06161856940044743 0.004130098089829634 0.02203508355899857 ['ENSG00000178502|ENST00000319121|KLHL11'] 83672 9531 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 41.632 1 0.06161718435223148 0.004130098089829634 0.022035734470545597 ['ENSG00000168143|ENST00000306858|FAM83B'] 24411 15941 FADDMYSLY True H1975_Epitope_Rep1 1123.45321278855 1123.4526749679299 66.628 1 0.06161443785861065 0.004130098089829634 0.022037025253249434 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 124952 10259 VHSPPNVGL True PC9_epitope_Rep5 918.49231560894 918.49120993586 44.448 2 0.06161263809480234 0.004130098089829634 0.022037871134246042 ['ENSG00000146247|ENST00000275034|PHIP'] 32748 9125 GHAMPIRSL True PC9_epitope_Rep5 980.5225701914001 980.52146993586 40.046 2 0.06161192847698684 0.004130098089829634 0.02203820465961111 ['ENSG00000140395|ENST00000267973|SKIC8'] 125031 7590 VIDDTNITR True PC9_epitope_Rep3 1045.5403880001702 1045.53928993586 34.193 2 0.061596004794819685 0.004130098089829634 0.022045690113620457 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 1118 5109 AEAPGAVAGA True H1975_Epitope_Rep2 812.4028318981999 812.4022849679301 24.731 1 0.06159035499386339 0.004130098089829634 0.022048346547137075 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 29887 20437 FVVDEVSNI True PC9_epitope_Rep1 1020.5127762699999 1020.51166993586 83.423 2 0.06158212808136073 0.004130098089829634 0.02205221521384495 ['ENSG00000146425|ENST00000367089|DYNLT1'] 70900 22445 LYEQAFQLL True PC9_epitope_Rep2 1123.5913609438699 1123.59026993586 91.823 2 0.0615596132170761 0.004130098089829634 0.022062805889400215 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 40073 7358 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 37.486 2 0.06153934418345967 0.004130098089829634 0.022072344126874352 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 12021 11758 DHSGQVTIL True PC9_epitope_Rep4 968.49270953176 968.49160993586 52.991 2 0.06153849680743594 0.004130098089829634 0.02207274296849021 ['ENSG00000139668|ENST00000298125|WDFY2'] 1530 6393 AEEPASVTP True H1975_Epitope_Rep3 899.42362691243 899.42307496793 29.569 1 0.06153737893893545 0.004130098089829634 0.0220732691351387 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF', 'MIA3|p.T1568Lfs*50|1|0.04|ENSG00000154305|chr1:222658815-222658816|-/CTGTCCTTTAGGAT|frameshift_variant'] 117091 20540 TVISILNTI True PC9_epitope_Rep6 972.58554728744 972.58444993586 91.736 2 0.061536041532473974 0.004130098089829634 0.022073898650580067 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 44309 16537 ILDEVIMGY True H1975_Epitope_Rep3 1051.5259838059899 1051.52547496793 69.106 1 0.06153294682734531 0.004130098089829634 0.02207535538696787 ['ENSG00000138160|ENST00000260731|KIF11'] 88995 20618 QVIQGLEAL True PC9_epitope_Rep3 969.5494961318898 969.54838993586 84.576 2 0.061532496429964105 0.004130098089829634 0.022075567404867037 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1', 'KLC1|p.G290Afs*11|1|0.15|ENSG00000126214|chr14:103669580-103669580|G/-|frameshift_variant'] 24384 14352 FAAGETFL True H1975_Epitope_Rep2 854.41741933318 854.4168749679301 60.355 1 0.06152295154276723 0.004130098089829634 0.02208006095607821 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 142168 9769 YVTEKVLAA True PC9_epitope_Rep4 992.5542471591598 992.55314993586 45.218 2 0.06152043972985673 0.004130098089829634 0.022081243608472006 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000136872|ENST00000647789|ALDOB', 'ENSG00000109107|ENST00000226253|ALDOC'] 100983 20213 SLFRVITEV True PC9_epitope_Rep2 1062.60734536118 1062.6062499358602 83.167 2 0.06151609171677258 0.004130098089829634 0.022083290946942703 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 48509 13427 KAINVFVSA True PC9_epitope_Rep2 947.54401682863 947.54290993586 56.93 2 0.06151160924332347 0.004130098089829634 0.022085401779736495 ['ENSG00000114209|ENST00000392750|PDCD10'] 31416 5989 GEAAGSPVP True H1975_Epitope_Rep3 783.37628279719 783.37573496793 28.049 1 0.06150661191244806 0.004130098089829634 0.02208775528002817 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 85731 9127 QHAVGIVV True PC9_epitope_Rep4 821.47593726881 821.47484993586 42.693 2 0.06150234513721606 0.004130098089829634 0.02208976490514072 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 97461 11675 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 49.98 2 0.06147626149755841 0.004130098089829634 0.022102053767435542 ['ENSG00000135900|ENST00000258383|MRPL44'] 25676 15010 FEQFPPPEI True H1975_Epitope_Rep2 1102.5335117145798 1102.5324099358602 62.886 2 0.06145472300968201 0.004130098089829634 0.022112205959695125 ['ENSG00000150990|ENST00000308736|DHX37'] 32597 13841 GGHGPSFPL True PC9_epitope_Rep5 867.42390169595 867.42280993586 58.26 2 0.06144425724494613 0.004130098089829634 0.022117140546059528 ['ENSG00000079246|ENST00000392132|XRCC5'] 107588 17906 SVPLKVPGL True PC9_epitope_Rep2 908.5695033004798 908.56840993586 74.179 2 0.06142830065796209 0.004130098089829634 0.022124665977023346 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 28954 7420 FTDSSGLIK True H1975_Epitope_Rep2 966.5022115862998 966.50110993586 33.485 2 0.06141164198349237 0.004151196369636964 0.02213252501784181 ['ENSG00000188321|ENST00000603380|ZNF559'] 12068 14350 DHTLGNII True PC9_epitope_Rep6 881.46068112749 881.45958993586 67.094 2 0.06141029588704612 0.004151196369636964 0.022133160175161894 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 89590 10940 QYNPKFQTL True PC9_epitope_Rep6 1137.58185888933 1137.5807699358602 52.955 2 0.06139249359692363 0.004151196369636964 0.022141561772458438 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 132511 18389 VVDPLNGWMY True H1975_Epitope_Rep3 1192.5586809166 1192.55758993586 77.088 2 0.061363676393508024 0.004151196369636964 0.022155167903937616 ['ENSG00000123384|ENST00000243077|LRP1'] 106009 9829 SSVPGVRLLQ True NCI_RA007_Epitope_Rep3 1054.61349337078 1054.6123899358602 45.736 2 0.06135276966306008 0.004151196369636964 0.022160319539357525 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 137595 7403 YEERVQAVV True H1975_Epitope_Rep3 1091.56112344475 1091.56002993586 33.454 2 0.061351841582362565 0.004151196369636964 0.022160757955204686 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 37863 17893 GYPEVALHF True PC9_epitope_Rep6 1031.5076313199097 1031.50652993586 81.45 2 0.061334854597098004 0.004151196369636964 0.022168783831225294 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 88134 4751 QRSGNVAEL True PC9_epitope_Rep4 972.4988575413598 972.49776993586 24.837 2 0.061334306738709814 0.004151196369636964 0.022169042723132144 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 107042 10340 SVFSKYFER True NCI_RA007_Epitope_Rep5 1161.5818588893299 1161.58021490379 46.401 3 0.061328910396996214 0.004151196369636964 0.0221715929257943 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 106387 8555 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.59187496793 40.723 1 0.0613233417654447 0.004151196369636964 0.02217422482966587 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 121987 19435 VFTYVGALF True NCI_RA007_Epitope_Rep5 1015.5378688190298 1015.53676993586 81.644 2 0.061322119766586955 0.004151196369636964 0.022174802421446302 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 2732 11517 AETAVSVIP True H1975_Epitope_Rep3 885.48074786573 885.47964993586 49.425 2 0.061307931105228336 0.004151196369636964 0.022181509859657115 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 26442 18169 FIDDANYSV True PC9_epitope_Rep2 1042.4607406971402 1042.46017496793 75.19 1 0.061298908369751784 0.004151196369636964 0.02218577616031832 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 88025 13663 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 57.578 2 0.061288562045794526 0.004151196369636964 0.02219066922617428 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 85 10633 AAAMTLRTV True PC9_epitope_Rep5 932.5113368013599 932.51022993586 45.888 2 0.06127950179638798 0.004151196369636964 0.022194954879640523 ['nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K', 'nc|ENSG00000078140|P61086-3|UBE2K'] 98369 6721 SEYLSQNPRVA True H1975_Epitope_Rep2 1262.62551460646 1262.62440993586 30.766 2 0.061256339605883336 0.004151196369636964 0.022205914424710958 ['ENSG00000168564|ENST00000504169|CDKN2AIP'] 52867 11587 KPFGQVIST True PC9_epitope_Rep1 975.5389314481899 975.53782993586 49.446 2 0.061253857772837615 0.004151196369636964 0.02220708903468433 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 105226 15096 SRIDIANTL True PC9_epitope_Rep5 1001.5505587610501 1001.54946993586 63.074 2 0.06124515951056639 0.004151196369636964 0.022211206223668144 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 22866 6904 EVDEDFDSK True PC9_epitope_Rep1 1082.44039917538 1082.4393099358601 31.362 2 0.061240030770335914 0.004151196369636964 0.02221363416035433 ['ENSG00000142634|ENST00000375980|EFHD2'] 131070 10828 VTDSPSPEYL True H1975_Epitope_Rep2 1106.5131701928199 1106.5120699358602 46.68 2 0.061239008296689254 0.004151196369636964 0.0222141182265287 ['ENSG00000170485|ENST00000335681|NPAS2', 'ENST00000486017.5_1_2:101541677-101580523:+|nuORF'] 111582 21617 TIDDGIFEV True PC9_epitope_Rep2 1007.48114178855 1007.48057496793 88.624 1 0.0612312220515094 0.004151196369636964 0.02221780475727696 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 48023 15610 IYLPEVRKI True PC9_epitope_Rep3 1129.68593003505 1129.68427490379 65.193 3 0.06122730811066175 0.004151196369636964 0.022219658090096604 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 76737 16644 NQVEALNNL True PC9_epitope_Rep3 1013.5141732523299 1013.51306993586 69.157 2 0.061223378985375415 0.004151196369636964 0.022221518754855507 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 98141 11935 SESPITVEV True H1975_Epitope_Rep2 959.48114178855 959.4805949679301 50.986 1 0.06121315353240553 0.004151196369636964 0.022226361755640665 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 109327 14210 TAYLDGVSL True NCI_RA007_Epitope_Rep3 937.47566248529 937.47456993586 63.201 2 0.0612129590148719 0.004151196369636964 0.022226453892776152 ['ENSG00000168209|ENST00000307365|DDIT4'] 118279 16130 TYLPQSYLI True NCI_RA007_Epitope_Rep4 1096.580461907 1096.57936993586 69.948 2 0.061205036370568226 0.004151196369636964 0.02223020690830228 ['nc|ENSG00000136156|Q9Y287-2|ITM2B', 'ENSG00000136156|ENST00000647800|ITM2B'] 73194 15749 MRYVASYL True PC9_epitope_Rep2 1001.5004377644898 1001.49934993586 65.847 2 0.061199946736309116 0.004151196369636964 0.022232618210726404 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 90197 2754 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 14.677 2 0.061189175757164205 0.004151196369636964 0.022237721935130725 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 134157 12959 VYLPGSRQTL True PC9_epitope_Rep2 1132.62405805448 1132.62296993586 55.139 2 0.06117166013048179 0.004151196369636964 0.022246023826724186 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 93476 5212 RQIKPYTL True NCI_RA007_Epitope_Rep3 1017.5971150306499 1017.59600993586 27.503 2 0.06116370933062472 0.004151196369636964 0.0222497932042792 ['ENSG00000277791|ENST00000619426|PSMB3'] 23258 6275 EVPAVPETLKK True NCI_RA007_Epitope_Rep5 1209.69688864157 1209.6952349037902 30.816 3 0.06116103131828109 0.004151196369636964 0.02225106294846973 ['ENSG00000147604|ENST00000352983|RPL7'] 27904 19434 FQDSVFNDL True PC9_epitope_Rep6 1083.48728979815 1083.48618993586 87.412 2 0.06115242313733767 0.004151196369636964 0.022255144851293887 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 142756 16936 YYQNYFEKL True PC9_epitope_Rep6 1266.5920892198599 1266.59098993586 77.687 2 0.06115069905627586 0.004151196369636964 0.022255962473246998 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 131225 11133 VTESPAKFALY True H1975_Epitope_Rep3 1224.63903941228 1224.6379499358602 47.919 2 0.061141410271115235 0.004151196369636964 0.02226036802431624 ['ENSG00000153179|ENST00000542104|RASSF3'] 85125 7059 QELPQPQA True NCI_RA007_Epitope_Rep4 909.4555957470499 909.45448993586 33.777 2 0.06111767748248616 0.004151196369636964 0.02227162779108944 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'ENST00000551520.1_1_12:57108340-57119068:-|nuORF'] 31112 23110 GAVPIFIEL True PC9_epitope_Rep2 957.5535188831699 957.55297496793 94.383 1 0.06111224364211328 0.004151196369636964 0.022274206548727842 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6'] 42978 8100 IESRTLAIA True NCI_RA007_Epitope_Rep2 972.5603951687599 972.55928993586 36.14 2 0.06109886461524947 0.004151196369636964 0.022280557043028344 ['ENSG00000147872|ENST00000276914|PLIN2'] 31481 12982 GEAPVPVLP True H1975_Epitope_Rep3 877.4909186266099 877.49037496793 55.17 1 0.06109377433654466 0.004151196369636964 0.02228297363020521 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 44334 20663 ILDPHVVLL True PC9_epitope_Rep5 1017.6222671493299 1017.6211699358599 84.534 2 0.061090722167710956 0.004151196369636964 0.02228442274837275 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 91944 4481 RKNDENITL True NCI_RA007_Epitope_Rep3 1101.57783613805 1101.5767299358602 24.448 2 0.06107977297997096 0.004151196369636964 0.022289621944543793 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 88653 9246 QTESDYSYY True H1975_Epitope_Rep2 1154.44039917538 1154.4393099358601 40.522 2 0.06107288821917483 0.004151196369636964 0.02229289172333608 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2'] 132455 13568 VVDAVVTQV True PC9_epitope_Rep6 928.5229470308799 928.52184993586 63.925 2 0.0610709402430983 0.004151196369636964 0.022293816954787334 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 7986 19968 ATDFGEALV True PC9_epitope_Rep5 921.4443623570098 921.44381496793 81.858 1 0.06106772614045067 0.004151196369636964 0.02229534363571977 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 22431 12865 ETERFRELLLY True H1975_Epitope_Rep1 1467.7721788401498 1467.7705349037901 54.554 3 0.06105666367390609 0.004151196369636964 0.022300598974513742 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 29498 21168 FVFPGELLL True NCI_RA007_Epitope_Rep4 1033.5848190114498 1033.5837299358602 91.785 2 0.06103214015173327 0.004175903490230448 0.022312253153063767 ['ENSG00000105281|ENST00000542575|SLC1A5'] 74600 19784 NGFPVFATV True PC9_epitope_Rep6 950.48616759934 950.48506993586 88.755 2 0.061009818888707525 0.004175903490230448 0.022322865589993756 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 104854 6413 SRAPSVATV True PC9_epitope_Rep1 886.4872302285 886.48612993586 29.474 2 0.061000388439810004 0.004175903490230448 0.02232735059159479 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 87309 9967 QPQPQPYAV True PC9_epitope_Rep6 1026.5134449763398 1026.5123499358601 48.88 2 0.06099698291936307 0.004175903490230448 0.022328970415667795 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 96434 18173 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41156993586 74.913 2 0.060981342698896 0.004175903490230448 0.022336411008332353 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 109932 14471 TEGEPPFLP True H1975_Epitope_Rep2 985.4756624852898 985.47511496793 60.82 1 0.06097987029272302 0.004175903490230448 0.022337111599141195 ['ENSG00000241058|ENST00000377304|NSUN6'] 115151 14839 TRDGNVFLV True PC9_epitope_Rep4 1019.5399940773499 1019.53888993586 65.017 2 0.060978113677163374 0.004175903490230448 0.022337947446827763 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 54481 17804 KYGSVIQLL True PC9_epitope_Rep6 1019.60153170475 1019.60042993586 81.116 2 0.0609776091137411 0.004175903490230448 0.02233818753773695 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 119680 11610 VAVGVIKAV True PC9_epitope_Rep4 854.5589386167799 854.55784993586 52.418 2 0.06095978400487169 0.004175903490230448 0.022346670927512115 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 640 17465 AASTLVTWL True H1975_Epitope_Rep1 960.52803241132 960.52748496793 72.665 1 0.060957197862790746 0.004175903490230448 0.02234790197741566 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 14364 6360 DSYVGDEAQTK True NCI_RA007_Epitope_Rep1 1211.5306111621096 1211.52950993586 28.765 2 0.06095552747437808 0.004200922656632561 0.022348697145041643 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 120595 6974 VEHGSVALP True H1975_Epitope_Rep3 907.4763311916299 907.4752299358599 31.787 2 0.060953330955554615 0.004200922656632561 0.022349742809753926 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 140274 16013 YRAPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54290993586 66.848 2 0.06094857731959309 0.004200922656632561 0.022352005956638884 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 117980 11281 TYDKGYQF True PC9_epitope_Rep1 1020.45526139388 1020.45416993586 48.272 2 0.06093772524469222 0.004200922656632561 0.0223571732770393 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 26451 18518 FIDDANYSV True PC9_epitope_Rep5 1042.4607406971402 1042.46017496793 76.254 1 0.06092919665366423 0.004200922656632561 0.022361235012117876 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 119610 6862 VATVSLPR True H1975_Epitope_Rep2 841.5021520166499 841.50104993586 31.314 2 0.060916934715138406 0.004200922656632561 0.022367075929668224 ['CON__P00761'] 126308 18762 VLIENVASL True PC9_epitope_Rep6 956.5542471591599 956.55314993586 84.808 2 0.06091592405508702 0.004200922656632561 0.02236755741491575 ['ENSG00000176153|ENST00000389614|GPX2'] 98076 11149 SEQVPLMSA True H1975_Epitope_Rep3 960.4586325221599 960.45752993586 47.98 2 0.06089864306430792 0.0042262595026414124 0.022375791656869322 ['ENSG00000075188|ENST00000552283|NUP37', 'ENST00000551200.5_1_12:102471044-102512308:-|nuORF'] 36694 22394 GVISGLFEL True PC9_epitope_Rep4 933.5171333744499 933.51658496793 94.372 1 0.060891552132794506 0.0042262595026414124 0.02237917122337773 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 132454 15439 VVDAVVTQV True PC9_epitope_Rep5 928.5229470308799 928.52184993586 64.395 2 0.0608810380173072 0.0042262595026414124 0.022384183149362833 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 65933 14627 LSDSFSDLY True H1975_Epitope_Rep3 1045.46040634397 1045.4593099358601 61.631 2 0.06087727760239505 0.0042262595026414124 0.022385975932801297 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 118522 16130 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 67.034 2 0.060872537916178485 0.004247322899505766 0.022388235771696376 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 2829 7366 AEVDAAMAA True NCI_RA007_Epitope_Rep4 847.3745685450299 847.3740149679301 34.974 1 0.06087170049696703 0.004247322899505766 0.022388635067101058 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 71615 4552 [Acetylation]-M[Oxidation]DKSELVQK True NCI_RA007_Epitope_Rep2 1134.5590755361598 1134.55796993586 22.334 2 0.06087010505964349 0.004247322899505766 0.02238939581610557 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB'] 14900 22942 DYATIFNNL True PC9_epitope_Rep3 1069.5080252427301 1069.5069299358602 93.513 2 0.060869245388910684 0.004247322899505766 0.022389805740848735 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 61010 19252 LIENVASL True PC9_epitope_Rep1 857.4858332461699 857.48472993586 78.853 2 0.06086790197787736 0.004247322899505766 0.022390446345646384 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 73160 6835 MRSPQMVSA True PC9_epitope_Rep4 1005.47357139365 1005.47246993586 33.511 2 0.06086647754848129 0.004247322899505766 0.022391125602248353 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 137468 10675 YEEAAMAIA True H1975_Epitope_Rep3 967.4320834211499 967.43153496793 46.134 1 0.06086252911952425 0.004247322899505766 0.022393008557119613 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 134625 17779 VYSPHVLNL True PC9_epitope_Rep3 1040.5654805492 1040.5643899358602 73.587 2 0.0608567514461096 0.004247322899505766 0.02239576411514321 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 21424 14707 ERIPDVAAL True PC9_epitope_Rep6 982.5447451046199 982.54364993586 68.515 2 0.060855359173264824 0.004247322899505766 0.02239642818098001 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 49194 4368 KEMEVSPSA True NCI_RA007_Epitope_Rep4 976.4535471417198 976.45244993586 23.15 2 0.06084116182742462 0.004247322899505766 0.02240320084674755 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000506137.1_1_4:3117057-3123221:+|nuORF'] 55235 11923 LADELINAA True H1975_Epitope_Rep2 928.48656152216 928.48546993586 50.942 2 0.06084060222841029 0.004247322899505766 0.02240346783466404 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000599232.1_1_19:58905872-58905992:+|nuORF'] 35231 16096 GRAPQVLVL True PC9_epitope_Rep3 951.5865503469499 951.58544993586 67.062 2 0.06082831854351299 0.004247322899505766 0.0224093291819299 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 14894 12460 DYAEVSNTF True NCI_RA007_Epitope_Rep5 1044.44000525256 1044.43890993586 54.584 2 0.06082829354808696 0.004247322899505766 0.022409341110302405 ['ENSG00000186141|ENST00000334163|POLR3C'] 111533 20367 TIAEIKNLF True PC9_epitope_Rep3 1047.59644632431 1047.5953499358602 83.59 2 0.06081117782039225 0.004247322899505766 0.022417510474239923 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 24450 21735 FADPDDFTL True PC9_epitope_Rep1 1039.4498416602698 1039.44927496793 88.435 1 0.06079820994339533 0.004247322899505766 0.02242370186923929 ['ENSG00000180921|ENST00000388913|FAM83H', 'FAM83H|p.A493P|1|0.23|ENSG00000180921|chr8:143727984-143727984|C/G|missense_variant'] 49253 6380 KEQEPMPTV True H1975_Epitope_Rep2 1057.5113963710098 1057.51087496793 29.468 1 0.06079664812219568 0.004247322899505766 0.022424447651689577 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2'] 114624 21236 TQDTNTFFL True PC9_epitope_Rep2 1085.50293986229 1085.50184993586 87.143 2 0.06079657440897954 0.004247322899505766 0.02242448285091418 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 77996 21088 NVPEGLLATV True PC9_epitope_Rep3 1011.56006081559 1011.55896993586 86.398 2 0.06078564522655883 0.004247322899505766 0.022429702265187337 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 104943 10372 SRDEQGACAVL True PC9_epitope_Rep5 1147.5291716934698 1147.52806993586 44.88 2 0.06078495481202441 0.004247322899505766 0.022430032021389497 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'CAPG|p.P133Qfs*10|1|0.08|ENSG00000042493|chr2:85401283-85401283|G/-|frameshift_variant', 'CAPG|p.I221Sfs*10|1|0.07|ENSG00000042493|chr2:85399141-85399141|T/-|frameshift_variant'] 69541 21593 LVDDNYFYL True PC9_epitope_Rep4 1160.5389910178399 1160.5378899358602 91.241 2 0.060775445603121314 0.004247322899505766 0.022434574264832176 ['ENSG00000174231|ENST00000304992|PRPF8'] 21430 8764 ERIQHAVQL True PC9_epitope_Rep1 1092.60399131624 1092.60288993586 38.549 2 0.060771301967764244 0.004247322899505766 0.02243655380840536 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 22502 7166 ETGDEPFQYKN True NCI_RA007_Epitope_Rep4 1326.5728103272597 1326.57170993586 34.186 2 0.06076580422073259 0.004247322899505766 0.022439180498917702 ['ENSG00000135821|ENST00000331872|GLUL', 'ENST00000324731.7_1_9:34917810-34918290:+|nuORF'] 40756 18631 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.5589899358602 76.884 2 0.06076138628380621 0.004247322899505766 0.022441291485319488 ['ENSG00000169813|ENST00000682386|HNRNPF'] 107377 12335 SVLKSIQEV True PC9_epitope_Rep4 1001.57571087973 1001.5746099358599 55.256 2 0.060760986367835015 0.004247322899505766 0.02244148258280338 ['ENSG00000039123|ENST00000230640|MTREX'] 132330 22106 VTYPGELLL True PC9_epitope_Rep3 1003.5589981864299 1003.55790993586 90.327 2 0.060751437557096256 0.004247322899505766 0.02244604586594084 ['ENSG00000146386|ENST00000367660|ABRACL'] 21418 17027 ERIPDVAAL True PC9_epitope_Rep3 982.5447451046199 982.54364993586 70.65 2 0.06074248251521465 0.004247322899505766 0.022450326160913782 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 132247 15382 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 71.312 2 0.0607254089778105 0.004247322899505766 0.02245848896230208 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 122990 12096 VGIDIFTGK True H1975_Epitope_Rep1 948.52803241132 948.52692993586 51.54 2 0.060723263199751756 0.004247322899505766 0.02245951504289202 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 35704 21587 GTFDIFYTA True PC9_epitope_Rep4 1033.4756624852898 1033.47507496793 91.216 1 0.0607224594466812 0.004247322899505766 0.022459899397188968 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 119573 11966 VATGVISTL True H1975_Epitope_Rep3 859.50148331031 859.5009349679301 51.185 1 0.06071480390778369 0.004247322899505766 0.022463560572238236 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ENST00000464970.1_1_7:65554274-65556745:+|nuORF'] 21656 17328 ERSDTFINL True PC9_epitope_Rep2 1093.54038800017 1093.53928993586 71.912 2 0.06071174785210341 0.004247322899505766 0.022465022248202238 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 99114 13820 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.4914349679301 58.002 1 0.06070310281500882 0.004247322899505766 0.02246915753835653 ['ENSG00000132646|ENST00000379143|PCNA'] 79977 23011 PEVLLYFLG True PC9_epitope_Rep5 1049.57973363101 1049.57917496793 93.502 1 0.0607018229584535 0.004247322899505766 0.022469769807290683 ['ENST00000605778.1_1_7:35735152-35735278:+|nuORF'] 31092 22343 GAVDPLLAL True PC9_epitope_Rep5 867.50656869075 867.50546993586 90.953 2 0.06070056739134849 0.004247322899505766 0.022470370471194896 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 107336 20720 SVLGAITSV True PC9_epitope_Rep5 845.48583324617 845.48472993586 84.757 2 0.06068426435388159 0.004247322899505766 0.022478171180320687 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 121010 10806 VEQAFQTIA True H1975_Epitope_Rep2 1005.51311062317 1005.51200993586 46.594 2 0.060668193448280075 0.004247322899505766 0.022485863232977275 ['ENSG00000075785|ENST00000265062|RAB7A'] 71795 19019 MEGLSWLV True H1975_Epitope_Rep3 933.4629896266099 933.4624449679301 79.753 1 0.06066444620014508 0.004247322899505766 0.022487657131235725 ['ENST00000378119.8_1_6:24720562-24720727:-|nuORF'] 4736 12758 ALDFIASK True PC9_epitope_Rep2 863.47526856247 863.47416993586 54.378 2 0.06066229818153752 0.004247322899505766 0.02248868549844708 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 1128 6156 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.4125149679301 28.651 1 0.06065437359185564 0.004247322899505766 0.02249247977850617 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 104655 10802 SQTFVNPHV True PC9_epitope_Rep5 1027.5086939490698 1027.50758993586 46.54 2 0.060650291632464 0.004247322899505766 0.022494434441261712 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 39909 18830 HPFGFVAV True PC9_epitope_Rep5 872.4544735482399 872.45336993586 77.444 2 0.060645453540237364 0.004247322899505766 0.02249675138166255 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 132051 21159 VTTDVSYLL True PC9_epitope_Rep3 1009.53317736141 1009.53208993586 86.674 2 0.06064037354531948 0.004247322899505766 0.02249918440212163 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 110969 20017 THALPIPVI True PC9_epitope_Rep5 959.5804023373499 959.57930993586 82.047 2 0.06063840287156062 0.004247322899505766 0.022500128304119633 ['ENSG00000136628|ENST00000366923|EPRS1'] 73155 14093 MRSPISAQL True PC9_epitope_Rep5 1001.5328005219299 1001.53170993586 59.22 2 0.060619841141462766 0.004271964589016419 0.022509020665055626 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF'] 88981 10659 QVIKEINQV True PC9_epitope_Rep5 1069.6131590176099 1069.61206993586 45.988 2 0.06061419057538454 0.004271964589016419 0.022511728315089855 ['ENSG00000109686|ENST00000604030|SH3D19', 'SH3D19|p.L145Ifs*67|1|0.04|ENSG00000109686|chr4:151174932-151174933|-/TTTGATG|frameshift_variant', 'SH3D19|p.R169Dfs*63|1|0.38|ENSG00000109686|chr4:151174859-151174859|G/-|frameshift_variant'] 106733 10640 STVSSVTQV True PC9_epitope_Rep5 906.4658260775799 906.46472993586 45.915 2 0.060599328737824754 0.004271964589016419 0.022518851257742237 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1'] 10295 5391 C[Carbamidomethyl]C[Carbamidomethyl]TESLVNR True NCI_RA007_Epitope_Rep1 1137.49067856863 1137.48958993586 25.048 2 0.060599326790685616 0.004271964589016419 0.022518852191096474 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 4205 6288 AIAQAESLRYK True NCI_RA007_Epitope_Rep2 1248.6826355597598 1248.68098490379 29.065 3 0.06058430384111786 0.004271964589016419 0.022526054437612186 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 95051 10066 RTSTGIIGV True PC9_epitope_Rep2 902.5185303567799 902.51742993586 44.049 2 0.060574440079445506 0.004271964589016419 0.02253078442642322 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 31563 10277 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43816993586 44.537 2 0.06057047261130173 0.004271964589016419 0.022532687209224078 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 75541 3800 NKYAASSY True NCI_RA007_Epitope_Rep4 902.4133965819001 902.41228993586 20.798 2 0.06056514563903553 0.004271964589016419 0.02253524223526744 ['nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5', 'ENSG00000128322|ENST00000330377|IGLL1'] 138623 6145 YIEANELK True H1975_Epitope_Rep3 978.5022115863 978.50110993586 28.647 2 0.06055256599134013 0.004271964589016419 0.022541276977909665 ['ENSG00000172137|ENST00000302628|CALB2'] 9996 20137 AYPPAPFMHI True PC9_epitope_Rep3 1142.55828699378 1142.5571899358602 82.711 2 0.060550126335338 0.004271964589016419 0.022542447506676905 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 31071 16843 GATSLVTLL True H1975_Epitope_Rep2 873.51713337445 873.51658496793 70.033 1 0.060536767320448014 0.004293721396616445 0.022548858044015522 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 71804 7493 MEGPTPVSA True H1975_Epitope_Rep2 887.4058686733099 887.40476993586 33.771 2 0.06052456001905844 0.004293721396616445 0.02255471736486707 ['ENSG00000198786|ENST00000361567|MT-ND5'] 74241 7145 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4601949679301 32.418 1 0.06052320772836854 0.004293721396616445 0.022555366529338754 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 9427 16946 AVTVMFDKV True PC9_epitope_Rep1 1008.5314035395999 1008.53030993586 70.007 2 0.06051622185842305 0.004293721396616445 0.02255872035340146 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 17368 16484 EHDGSLFQAV True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 68.542 2 0.06051612385035193 0.004293721396616445 0.022558767409014635 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 136811 15050 YAAELIERV True PC9_epitope_Rep4 1062.57095985246 1062.5698699358602 65.822 2 0.060487451879641704 0.004293721396616445 0.022572537227939483 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 31509 4143 GEDERELAA True H1975_Epitope_Rep3 988.4461532621598 988.44504993586 21.057 2 0.06048168450710631 0.004293721396616445 0.02257530795421703 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 31947 16596 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 69.063 2 0.06047722093430877 0.004293721396616445 0.022577452529498436 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 58141 4455 LEKPAKYDDIK True NCI_RA007_Epitope_Rep1 1318.7132669817 1318.7116349037901 21.437 3 0.06047667407295979 0.004293721396616445 0.022577715288128165 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF', 'ENST00000432206.1_1_20:13373901-13374318:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000505218.1_1_5:159377718-159377781:-|nuORF', 'ENST00000424043.3_1_1:92580458-92580773:-|nuORF'] 101951 13564 SLQEALVV True H1975_Epitope_Rep2 857.4858332461698 857.48528496793 57.311 1 0.060476259850306364 0.004293721396616445 0.022577914317718818 ['ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-2|IL12RB1'] 134583 21926 VYSGGVYLF True PC9_epitope_Rep1 1003.5014833103099 1003.50038993586 89.154 2 0.060473801829795275 0.004293721396616445 0.02257909540336936 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 104234 13537 SQHGVIIQL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 63.803 2 0.06047175354738102 0.004293721396616445 0.022580079651707937 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 43912 9354 IIALDGDTK True PC9_epitope_Rep2 944.51786165044 944.51676993586 41.316 2 0.060468677616478346 0.004293721396616445 0.022581557782938216 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 34651 8065 GQATNLQRL True PC9_epitope_Rep5 999.5461420869499 999.54504993586 35.959 2 0.060468506364592556 0.004293721396616445 0.02258164008021124 ['ENSG00000173801|ENST00000393931|JUP'] 97867 10280 SELPVSEVA True H1975_Epitope_Rep1 929.47057710485 929.46948993586 44.487 2 0.06046794326225946 0.004293721396616445 0.022581910688128808 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 26549 11872 FIIPNVVK True H1975_Epitope_Rep1 928.57458868092 928.57348993586 50.664 2 0.06046672785785391 0.004293721396616445 0.022582494780404395 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 95108 9725 RVDPAKGLFY True H1975_Epitope_Rep2 1164.6291434349198 1164.6274949037902 42.393 3 0.06043963627409816 0.004293721396616445 0.022595517874278104 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 26682 16218 FITDPVVL True H1975_Epitope_Rep3 902.51131971802 902.51077496793 67.839 1 0.0604353850654773 0.004293721396616445 0.02259756207752705 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000418838.1_1_X:40219448-40219874:-|nuORF', 'ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 140255 17754 YRAPELLL True PC9_epitope_Rep2 973.5596668927699 973.55856993586 73.572 2 0.060435063587666905 0.004293721396616445 0.02259771666770541 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'ENSG00000155111|ENST00000368911|CDK19', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 35786 14093 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 62.116 2 0.06043482322062257 0.004293721396616445 0.022597832254490323 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 22324 10589 ETDNNIVVY True H1975_Epitope_Rep1 1065.4978544818498 1065.49727496793 45.684 1 0.060408096125694644 0.004293721396616445 0.022610688036126023 ['ENSG00000150787|ENST00000280362|PTS'] 20907 18107 EQLSFLVL True NCI_RA007_Epitope_Rep3 947.53278343859 947.53168993586 79.346 2 0.06034743151662154 0.004293721396616445 0.02263989253885543 ['ENSG00000182810|ENST00000332395|DDX28'] 26898 20796 FLDGNELTL True PC9_epitope_Rep4 1020.51277627 1020.51166993586 88.14 2 0.060343639531997666 0.004293721396616445 0.022641719175214733 ['ENSG00000213719|ENST00000375784|CLIC1'] 308 9857 AAHLLNDAL True NCI_RA007_Epitope_Rep1 936.50288029264 936.50178993586 42.344 2 0.06034329084995128 0.004293721396616445 0.022641887145528415 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 119616 6845 VATVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 33.014 2 0.0603421614200357 0.004293721396616445 0.022642431232656073 ['CON__P00761'] 28941 11875 FTDPRAYLKY True H1975_Epitope_Rep2 1272.6502728023197 1272.64861490379 50.756 3 0.06034181023482261 0.004293721396616445 0.022642600413666142 ['ENSG00000026652|ENST00000320285|AGPAT4'] 89391 15682 QYAIISEAW True NCI_RA007_Epitope_Rep3 1079.52876068731 1079.52766993586 69.32 2 0.06033732437470687 0.004293721396616445 0.022644761546515124 ['ENSG00000165475|ENST00000298248|CRYL1', 'nc|ENSG00000165475|Q9Y2S2-2|CRYL1'] 137730 13964 YENELM[Oxidation]LMA True H1975_Epitope_Rep2 1128.48313339828 1128.48202993586 58.86 2 0.06033209755175163 0.004293721396616445 0.022647279886614573 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 107458 19057 SVLVSVSEV True PC9_epitope_Rep2 917.50696261357 917.50641496793 78.668 1 0.060328765916961014 0.004293721396616445 0.02264888523751916 ['ENSG00000221926|ENST00000649191|TRIM16'] 111463 11975 THTTPVLL True PC9_epitope_Rep3 880.5018176634799 880.50072993586 51.084 2 0.06032398728768001 0.004293721396616445 0.022651188004748933 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 75990 20695 NLVPMIIHL True PC9_epitope_Rep4 1048.61032256664 1048.6092299358602 87.764 2 0.060321000478549575 0.004293721396616445 0.022652627422426273 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.D378N|1|0.11|ENSG00000186432|chr3:160514082-160514082|C/T|missense_variant'] 52613 18539 KLLPQLTYL True PC9_epitope_Rep6 1087.66413196131 1087.66302993586 83.952 2 0.0603195981216812 0.004293721396616445 0.0226533032818411 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 57812 5440 LEERYVPRA True H1975_Epitope_Rep3 1131.6036569630699 1131.60254993586 25.984 2 0.0603169677804381 0.004293721396616445 0.022654571012162398 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 136441 15624 WVDSDQLLY True H1975_Epitope_Rep1 1137.53423999057 1137.53367496793 65.383 1 0.060304869898027545 0.004293721396616445 0.02266040259013783 ['ENSG00000116221|ENST00000360840|MRPL37'] 77126 14408 NRNEDPLVL True PC9_epitope_Rep3 1068.55637241748 1068.55526993586 60.52 2 0.060300368531673726 0.004293721396616445 0.022662572745864876 ['ENSG00000165355|ENST00000298097|FBXO33'] 16365 5583 EEILAQAK True PC9_epitope_Rep4 900.4916469026 900.49054993586 28.255 2 0.0602949669279194 0.004293721396616445 0.022665177165190457 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 140426 8033 YRGGSISV True PC9_epitope_Rep1 837.43446637965 837.43336993586 35.72 2 0.06028622537773001 0.004309681391411421 0.022669392539278882 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 61272 22661 LIPEYLNFI True PC9_epitope_Rep4 1120.61684741572 1120.61574993586 95.395 2 0.06028019787426779 0.004309681391411421 0.022672299554088504 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 44042 20312 IIIQTVPTL True PC9_epitope_Rep4 996.62193279616 996.62082993586 86.273 2 0.06027532238302123 0.004309681391411421 0.022674651211245213 ['ENSG00000118217|ENST00000367942|ATF6', 'ATF6|p.N437Tfs*15|1|0.29|ENSG00000118217|chr1:161846567-161846567|A/-|frameshift_variant'] 2715 7206 AETAAVTVAA True H1975_Epitope_Rep3 902.4709114580199 902.4703649679301 32.694 1 0.060262377411148274 0.004309681391411421 0.022680896200227348 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 96313 9489 RYSGNQVLF True NCI_RA007_Epitope_Rep4 1082.55089311422 1082.5497899358602 43.351 2 0.06025775247247964 0.004309681391411421 0.022683127769768285 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 30564 7214 GAHGDAVIL True H1975_Epitope_Rep2 851.4501164437901 851.44900993586 32.683 2 0.06025729432299673 0.004309681391411421 0.022683348841402648 ['ENSG00000162482|ENST00000361640|AKR7A3', 'nc|ENSG00000211454|Q8NHP1|AKR7L', 'ENSG00000053371|ENST00000235835|AKR7A2'] 121821 16594 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 68.834 2 0.06024459239493057 0.004309681391411421 0.022689478704961664 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 25361 8713 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.4761749679299 38.475 1 0.06023331592429532 0.004309681391411421 0.02269492191603841 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 17417 4846 EHDPVGQM[Oxidation]V True PC9_epitope_Rep4 1026.4440454676198 1026.44294993586 25.226 2 0.06021719848549194 0.004309681391411421 0.022702703951271296 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 27263 16118 FLPTLLHQA True PC9_epitope_Rep6 1038.58621599378 1038.5851099358601 74.339 2 0.06020355784891217 0.004309681391411421 0.022709292001693287 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 30335 18548 GAAPLPLLL True H1975_Epitope_Rep1 863.54803957991 863.5474949679301 77.33 1 0.0601962027971557 0.004309681391411421 0.02271284501044945 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 106390 8912 STIEYVIQR True NCI_RA007_Epitope_Rep4 1107.59242357303 1107.59187496793 41.112 1 0.060172065802513594 0.004309681391411421 0.022724508436312144 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 134684 18926 VYTEAIADI True PC9_epitope_Rep4 993.5018772331298 993.50078993586 80.885 2 0.060149986366558626 0.004309681391411421 0.022735182387000785 ['ENSG00000125755|ENST00000245934|SYMPK'] 29085 19695 FTIGEAITSA True PC9_epitope_Rep4 1008.5127762699999 1008.51166993586 83.878 2 0.06014868519121889 0.004309681391411421 0.022735811561796798 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 9207 20435 AVMPTLIQA True PC9_epitope_Rep1 942.5208388558998 942.51974993586 83.415 2 0.060140056942330156 0.004309681391411421 0.022739984095890557 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 8577 14714 ATVPGLLKV True PC9_epitope_Rep6 896.5695033004799 896.56840993586 68.545 2 0.0601378229985512 0.004309681391411421 0.022741064522134057 ['ENSG00000179820|ENST00000391770|MYADM'] 8675 8561 AVAISLPK True H1975_Epitope_Rep3 797.50108938749 797.49998993586 37.918 2 0.06013290230663852 0.004309681391411421 0.022743444534053095 ['ENSG00000149257|ENST00000358171|SERPINH1'] 118343 19275 TYMKDLYQL True PC9_epitope_Rep5 1173.5739966275698 1173.57288993586 79.184 2 0.06012487993001564 0.004309681391411421 0.022747325237041618 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 31687 19071 GEFTFLLPA True H1975_Epitope_Rep3 993.5171333744498 993.51658496793 79.97 1 0.06012220947012225 0.004309681391411421 0.022748617165186738 ['ENSG00000099203|ENST00000214869|TMED1'] 38945 7985 HHIGDRSLSL True PC9_epitope_Rep2 1133.59415490853 1133.5924949037899 36.078 3 0.060116170682376895 0.004309681391411421 0.022751538885695692 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 2659 7773 AESLQPVAA True H1975_Epitope_Rep3 884.4603467743199 884.45924993586 34.883 2 0.06009554747441209 0.004309681391411421 0.022761519497904396 ['ENSG00000038219|ENST00000040738|BOD1L1'] 25755 10680 FETEFNTQP True H1975_Epitope_Rep1 1111.48220441771 1111.48110993586 46.04 2 0.06009081256770532 0.004309681391411421 0.022763811520812253 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 96690 19312 SALDTITTV True PC9_epitope_Rep3 919.48622716899 919.48512993586 79.506 2 0.06006833354806328 0.004309681391411421 0.022774695789648802 ['ENSG00000138160|ENST00000260731|KIF11'] 136836 14715 YADGESFLGY True H1975_Epitope_Rep1 1120.4713053808398 1120.47020993586 61.819 2 0.0600560547437187 0.004309681391411421 0.02278064314691329 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 1902 5542 AEIGEHVAP True H1975_Epitope_Rep2 921.45559574705 921.45448993586 26.325 2 0.060051766683212694 0.004309681391411421 0.02278272044330048 ['ENSG00000084774|ENST00000264705|CAD'] 39965 11214 HPLLGVSA True PC9_epitope_Rep1 792.4493881678001 792.4488349679301 48.015 1 0.060050159049627454 0.004309681391411421 0.022783499285373987 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 35939 4020 GTSSVIVSR True NCI_RA007_Epitope_Rep3 904.4977949122 904.49668993586 22.263 2 0.06004921529142973 0.004309681391411421 0.022783956514398653 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 106370 18738 STIAILNSV True PC9_epitope_Rep6 916.5229470308801 916.52239496793 84.716 1 0.06002524155246024 0.004309681391411421 0.0227955740370084 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 48512 14314 KAINVFVSA True PC9_epitope_Rep5 947.54401682863 947.54290993586 60.062 2 0.060023146673072625 0.004309681391411421 0.022796589458386772 ['ENSG00000114209|ENST00000392750|PDCD10'] 35043 9232 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 40.363 2 0.060020144529681144 0.004309681391411421 0.022798044716822525 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 74260 5852 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 27.498 2 0.0600067589999548 0.004309681391411421 0.02280453424478017 ['ENSG00000167658|ENST00000309311|EEF2'] 125121 6913 VIFTGGVGK True NCI_RA007_Epitope_Rep3 876.5069030439198 876.50580993586 34.296 2 0.06000357358530433 0.004309681391411421 0.022806078834482692 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 44565 20800 ILPEELQTL True PC9_epitope_Rep2 1054.5910265907 1054.58992993586 85.45 2 0.05999717286153836 0.004309681391411421 0.02280918279736684 ['ENSG00000198315|ENST00000330236|ZKSCAN8', 'nc|ENSG00000198315|Q15776-2|ZKSCAN8'] 40434 15041 HRALVAVLL True PC9_epitope_Rep6 990.6338348925399 990.63272993586 69.894 2 0.059991649719450195 0.004309681391411421 0.022811861495303214 ['ENSG00000089154|ENST00000300648|GCN1'] 64293 8401 LPKEDPTAV True PC9_epitope_Rep1 968.5178616504398 968.51676993586 37.152 2 0.05995158137688587 0.004309681391411421 0.022831303025098882 ['ENSG00000181789|ENST00000314797|COPG1'] 140663 15744 YRTEFTTAL True PC9_epitope_Rep1 1100.55022440788 1100.54912993586 65.384 2 0.059949920369596336 0.004309681391411421 0.022832109286502384 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 2112 8631 AELIHQIEA True H1975_Epitope_Rep2 1022.53965972418 1022.53856993586 38.156 2 0.05994408993852133 0.004309681391411421 0.022834939612521952 ['ENSG00000198707|ENST00000552810|CEP290'] 89441 20738 QYEEQFVTL True PC9_epitope_Rep5 1155.5448046742697 1155.54427496793 84.827 1 0.059941032172607295 0.004309681391411421 0.022836424102827425 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 2746 4004 AETKPPM[Oxidation]AP True H1975_Epitope_Rep2 956.4637182830398 956.46262993586 20.473 2 0.05991199709351949 0.004309681391411421 0.02285052448686172 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 1835 10899 AEIDAITAP True H1975_Epitope_Rep1 899.46001242115 899.4594649679301 46.885 1 0.05990116802960536 0.004309681391411421 0.022855785462159158 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'FNBP4|p.Q159L|1|0.48|ENSG00000109920|chr11:47753077-47753077|T/A|missense_variant', 'ENST00000533707.1_1_11:47774435-47776097:-|nuORF'] 89686 13849 RAADVLVYL True H1975_Epitope_Rep2 1018.5811306133398 1018.58002993586 58.416 2 0.05989973793652883 0.004309681391411421 0.02285648031227272 ['ENSG00000126391|ENST00000317568|FRMD8', 'nc|ENSG00000227942|Q9BZ68|FRMD8P1', 'nc|ENSG00000126391|Q9BZ67-3|FRMD8'] 40407 6341 HQVPAVSSV True PC9_epitope_Rep4 922.4872302285 922.48612993586 31.466 2 0.05989206423196648 0.004309681391411421 0.022860209121250447 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 121831 14553 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 67.872 2 0.05988128987334048 0.004309681391411421 0.022865445535057927 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 72793 21788 MPFAGLISA True PC9_epitope_Rep2 905.46807500705 905.4675249679301 89.278 1 0.0598589897539886 0.004309681391411421 0.02287628701596522 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 75120 13332 NHYAEIQVV True PC9_epitope_Rep5 1071.53490869691 1071.53380993586 56.294 2 0.059849712858446515 0.004309681391411421 0.022880798471461898 ['ENSG00000100220|ENST00000216038|RTCB'] 104496 21638 SQMATILNL True PC9_epitope_Rep5 989.5215671318899 989.52101496793 88.273 1 0.0598471188467909 0.004309681391411421 0.022882060112414716 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 55103 7024 LAAARLAAA True PC9_epitope_Rep4 826.5024863698198 826.50138993586 34.269 2 0.059839202631149564 0.004309681391411421 0.022885910687537377 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 111511 7748 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1005.4437110134398 1005.44260993586 34.762 2 0.05982956531904226 0.004309681391411421 0.022890599227365086 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 64778 18920 LQAPELANV True PC9_epitope_Rep1 953.5181960036099 953.51708993586 77.56 2 0.059804331739268024 0.004309681391411421 0.022902879470291407 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 31902 14590 GELTMTFPA True H1975_Epitope_Rep2 965.4528188657299 965.45172993586 61.276 2 0.05979503025365362 0.004309681391411421 0.022907407668114922 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 33524 18138 GLDSQFVEV True PC9_epitope_Rep6 992.4814761417199 992.48036993586 82.405 2 0.05978016661860744 0.004309681391411421 0.022914645351002447 ['ENSG00000131389|ENST00000622186|SLC6A6'] 62068 15537 LLDTVELATY True H1975_Epitope_Rep3 1136.5965058939598 1136.59540993586 65.181 2 0.05977734667269189 0.004309681391411421 0.022916018727235383 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 85273 17838 QEQLLAILP True H1975_Epitope_Rep3 1023.5964463243098 1023.59587496793 74.644 1 0.05976716216183482 0.004309681391411421 0.022920979433509077 ['ENSG00000171222|ENST00000305978|SCAND1'] 104956 15077 SRDGMNIVL True PC9_epitope_Rep2 1003.5120650773499 1003.51096993586 63.252 2 0.05976623715702477 0.004309681391411421 0.022921430036386976 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 17615 7698 EHINSVSAM True PC9_epitope_Rep3 986.44913046762 986.44802993586 34.606 2 0.05976459433587892 0.004309681391411421 0.022922230333099515 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 90618 4644 REMPVKVEA True NCI_RA007_Epitope_Rep5 1057.5590152697698 1057.5579099358602 24.542 2 0.05976027102178436 0.004309681391411421 0.022924336547512223 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 140302 6224 YRDEFSHQV True PC9_epitope_Rep2 1179.53088594563 1179.52924490379 29.338 3 0.05975019326751629 0.004309681391411421 0.022929246869867796 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.T1015Pfs*15|1|0.53|ENSG00000109111|chr17:28688125-28688125|G/-|frameshift_variant'] 140432 19713 YRGIFPVL True PC9_epitope_Rep4 963.5541875895099 963.55308993586 83.949 2 0.059747896777965055 0.004309681391411421 0.022930365953777117 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 103384 7481 SPPIPLAK True NCI_RA007_Epitope_Rep2 821.50108938749 821.49998993586 33.727 2 0.059737761549209664 0.004309681391411421 0.022935305464267874 ['ENSG00000155660|ENST00000652332|PDIA4'] 105515 6133 SSAGPGLLK True NCI_RA007_Epitope_Rep2 828.4705175352 828.46942993586 28.463 2 0.05973449168441808 0.004309681391411421 0.022936899273779402 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 41498 17291 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 71.684 2 0.059730201315175216 0.004309681391411421 0.02293899065411666 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 1543 9742 AEEPWGEEA True H1975_Epitope_Rep1 1016.4087051242799 1016.4081749679301 42.402 1 0.05973003662123623 0.004309681391411421 0.022939070939163395 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 62021 11758 LLDQRPAWY True H1975_Epitope_Rep2 1160.5978433066398 1160.59674993586 50.303 2 0.05972725734122517 0.004309681391411421 0.02294042582189496 ['nc|ENSG00000179241|Q86YD5-2|LDLRAD3', 'ENSG00000179241|ENST00000315571|LDLRAD3'] 67881 20934 LTATGALLLL True PC9_epitope_Rep3 984.62193279616 984.62082993586 85.8 2 0.05972667473567061 0.004309681391411421 0.022940709847918888 ['ENSG00000187492|ENST00000412678|CDHR4'] 99349 18587 SHSVFSVTI True PC9_epitope_Rep5 975.50254593947 975.50144993586 76.519 2 0.05972170463675621 0.004309681391411421 0.022943132950776542 ['ENSG00000138160|ENST00000260731|KIF11'] 85220 9019 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.686 2 0.05971657583514577 0.004309681391411421 0.02294563367097311 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 87006 15633 QMISRIEYI True PC9_epitope_Rep6 1151.60088008175 1151.5997899358601 72.334 2 0.059714961127365684 0.004309681391411421 0.0229464210275149 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 98339 11074 SEYEMSIAA True H1975_Epitope_Rep3 999.4219126602699 999.4213749679301 47.688 1 0.05971428161727725 0.004309681391411421 0.0229467523745124 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 61100 21877 LIIDEIHLL True PC9_epitope_Rep3 1077.64339651673 1077.6422899358602 89.453 2 0.05969725895948734 0.004309681391411421 0.022955054490398214 ['ENSG00000112249|ENST00000369162|ASCC3'] 116762 17654 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 73.226 2 0.05969198944339403 0.004309681391411421 0.022957625038330022 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF'] 41493 17344 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 71.526 2 0.05968966790698969 0.004309681391411421 0.022958757601213072 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 90786 3460 RESKVVVPP True NCI_RA007_Epitope_Rep3 1009.5920296502098 1009.59092993586 19.29 2 0.05968085395919997 0.004309681391411421 0.022963057953441078 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 74557 19955 NFTNVAATF True PC9_epitope_Rep2 983.4712458111899 983.47014993586 82.156 2 0.05967445018071235 0.004309681391411421 0.02296618283609425 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 72954 12339 MQDKSSYLL True PC9_epitope_Rep2 1083.52704643515 1083.5259499358601 52.773 2 0.05966426408759259 0.004309681391411421 0.02297115418984907 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9', 'DOCK9|p.D312Efs*18|1|0.3|ENSG00000088387|chr13:98914352-98914352|A/-|frameshift_variant'] 8018 15336 ATDLDVANFY True H1975_Epitope_Rep3 1127.51350454599 1127.51297496793 64.401 1 0.059664189201971085 0.004309681391411421 0.022971190741628077 ['ENSG00000142252|ENST00000270257|GEMIN7'] 52557 19143 KLGDFGLATV True PC9_epitope_Rep2 1019.5651461960299 1019.56404993586 79.005 2 0.05965729555922814 0.004309681391411421 0.02297455576506527 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 112323 18747 TLAAHLPAEF True PC9_epitope_Rep1 1068.56039516876 1068.55928993586 76.898 2 0.05965357497834336 0.004309681391411421 0.022976372094442105 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 54648 16199 KYLNSVQYI True PC9_epitope_Rep1 1126.60225998074 1126.60116993586 67.126 2 0.05965203079018565 0.004309681391411421 0.02297712598128566 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'RALGPS2|p.D401Mfs*5|1|0.09|ENSG00000116191|chr1:178889650-178889650|G/-|frameshift_variant', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 26550 12045 FIIPNVVK True H1975_Epitope_Rep1 928.57458868092 928.57348993586 51.341 2 0.059647550188008665 0.004309681391411421 0.02297931357975679 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 102966 9600 SPFAEGTSA True PC9_epitope_Rep5 865.38176210045 865.3806699358599 41.888 2 0.05964525191371615 0.004309681391411421 0.02298043575718063 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 90204 3222 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 17.034 2 0.05962506429607148 0.004309681391411421 0.02299029489830916 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 17834 10206 EHTPSALAI True PC9_epitope_Rep6 937.4868958753299 937.48578993586 49.902 2 0.059622397152689854 0.004309681391411421 0.022991597753837828 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000566146.1_1_16:30080209-30080764:+|nuORF'] 12007 13305 DHSATIVSI True PC9_epitope_Rep4 941.48181049489 941.48070993586 59.073 2 0.059620778296976845 0.004309681391411421 0.022992388570881123 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75'] 105055 4776 SRDPTQAIA True PC9_epitope_Rep4 957.4879585044898 957.48686993586 24.943 2 0.05960414441592565 0.004309681391411421 0.023000515716596108 ['ENSG00000103479|ENST00000262133|RBL2', 'nc|ENSG00000103479|Q08999-2|RBL2'] 142153 11114 YVSGELEHV True PC9_epitope_Rep3 1031.4923751785898 1031.4912699358601 47.749 2 0.05959873080881877 0.004309681391411421 0.02300316131353318 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 110947 12574 THAAQQILL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 53.365 2 0.0595872383665551 0.004309681391411421 0.02300877851754183 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 70347 20178 LVSPASFENV True PC9_epitope_Rep1 1061.5393253710101 1061.53822993586 82.443 2 0.05958038927177296 0.004309681391411421 0.023012126768348688 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 85914 14295 QHGGFVVTV True PC9_epitope_Rep3 942.4923156089399 942.49120993586 60.072 2 0.05957156172861388 0.004309681391411421 0.023016442857578277 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 72080 4288 M[Oxidation]EVKPSSVTA True H1975_Epitope_Rep2 1063.52196143515 1063.5208699358602 21.607 2 0.05955363155318657 0.00432745243643254 0.023025211802487778 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 141865 15623 YVDPQFLTY True H1975_Epitope_Rep2 1144.54407639828 1144.5429699358601 65.249 2 0.059548632747084024 0.00432745243643254 0.023027657063734844 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 27456 19575 FM[Oxidation]ANIPLLL True H1975_Epitope_Rep2 1046.5834394929 1046.58234993586 81.226 2 0.05954167629780003 0.00432745243643254 0.023031060336358874 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 55094 8265 LAAARLAAA True PC9_epitope_Rep1 826.5024863698198 826.50138993586 36.624 2 0.059537936915695235 0.00432745243643254 0.02303288992654489 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 8389 19797 ATLPTTLGV True PC9_epitope_Rep1 871.5014833103099 871.50038993586 80.97 2 0.05953765943202854 0.00432745243643254 0.02303302569792993 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 4161 14204 AHTPVIISV True PC9_epitope_Rep2 935.54401682863 935.54290993586 59.904 2 0.059530774389684064 0.00432745243643254 0.023036394748109493 ['ENSG00000182993|ENST00000330828|C12orf60'] 76887 11626 NRDLATPVM True PC9_epitope_Rep5 1015.51206507735 1015.51096993586 49.714 2 0.05952580077945886 0.00432745243643254 0.02303882875804073 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 103191 19449 SPILVATAV True PC9_epitope_Rep1 869.52221875489 869.52112993586 79.626 2 0.05952061102454284 0.00432745243643254 0.02304136879520907 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 96924 12040 SAVPPGTSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 51.627 2 0.059516655008148726 0.00432745243643254 0.023043305171074484 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 64899 14253 LQEDPPVGV True PC9_epitope_Rep1 952.4865615221598 952.48546993586 59.649 2 0.05949886930783059 0.00432745243643254 0.02305201267599606 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 132451 15511 VVDAVVTQV True PC9_epitope_Rep1 928.5229470308799 928.52184993586 64.485 2 0.05949643893336561 0.00432745243643254 0.023053202768520124 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 91650 17109 RISGETIFVTA True PC9_epitope_Rep1 1192.64518742188 1192.6440899358602 70.636 2 0.0594918438839691 0.00432745243643254 0.023055452999909888 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 88008 10189 QRNTFLTL True NCI_RA007_Epitope_Rep1 991.5450794577899 991.5439899358599 43.645 2 0.059487399065705326 0.00432745243643254 0.023057629851945836 ['ENST00000321037.4_1_6:46107576-46107684:+|nuORF'] 78172 18787 NYASTFTWW True NCI_RA007_Epitope_Rep3 1174.5083595959 1174.5072699358602 82.162 2 0.0594862950453994 0.00432745243643254 0.023058170575429044 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 33471 14225 GLATDVQTV True PC9_epitope_Rep1 902.47091145802 902.46980993586 59.541 2 0.05948346963735172 0.00432745243643254 0.023059554447118484 ['ENSG00000277791|ENST00000619426|PSMB3'] 108893 10384 TAAPPAQPL True PC9_epitope_Rep5 864.4705175352 864.46942993586 44.926 2 0.0594787272567424 0.00432745243643254 0.02306187741276302 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 140161 10706 YQTEIGQTL True NCI_RA007_Epitope_Rep4 1051.51858992643 1051.51748993586 48.026 2 0.05947717805864173 0.00432745243643254 0.023062636304314828 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 90269 9879 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54487496793 42.987 1 0.059476959321383215 0.00432745243643254 0.0230627434569708 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 26307 12834 FHLSSQSSL True PC9_epitope_Rep3 1004.49270953176 1004.49160993586 54.385 2 0.05947510441620067 0.00432745243643254 0.0230636521361671 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 35232 16193 GRAPQVLVL True PC9_epitope_Rep3 951.5865503469499 951.58544993586 67.426 2 0.05947275855218751 0.00432745243643254 0.02306480137242135 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 31090 22168 GAVDPLLAL True PC9_epitope_Rep2 867.50656869075 867.50546993586 90.757 2 0.059455995468305704 0.00432745243643254 0.023073015104433294 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 97976 7145 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.4183249679301 32.455 1 0.059453607892245804 0.00432745243643254 0.023074185207510544 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 133352 18383 VVVEIIKAV True PC9_epitope_Rep5 968.6270181765998 968.62592993586 75.728 2 0.05942511272262406 0.00432745243643254 0.023088154282179963 ['ENSG00000066654|ENST00000396083|THUMPD1'] 45289 19917 IPVYSPLSA True PC9_epitope_Rep3 945.5171333744499 945.51602993586 81.851 2 0.059421769268481466 0.00432745243643254 0.02308979383435235 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 107304 7576 SVLDSSALK True NCI_RA007_Epitope_Rep4 918.5022115863 918.50110993586 35.79 2 0.05942011490292702 0.00432745243643254 0.023090605135894393 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25573299-25581087:+|nuORF', 'nc|ENSG00000197077|Q9BY89-2|KIAA1671'] 121867 16240 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 67.456 2 0.059418304842440366 0.00432745243643254 0.02309149281998046 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 113739 10313 TMDELVEHY True H1975_Epitope_Rep2 1135.48557554599 1135.48446993586 44.675 2 0.059414374498852465 0.00432745243643254 0.02309342043334763 ['ENSG00000071051|ENST00000233154|NCK2'] 98259 9836 SEVEVIHVP True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 45.763 2 0.0594104518256586 0.00432745243643254 0.02309534443065804 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 9692 20611 AYGGAFYAF True PC9_epitope_Rep4 965.42831837005 965.4272299358599 87.434 2 0.05939547815346894 0.00432745243643254 0.023102690074551537 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 62504 21732 LLIPGLATA True PC9_epitope_Rep3 867.54295419947 867.5424049679301 88.886 1 0.05939047235209775 0.00432745243643254 0.023105146247332183 ['ENSG00000125356|ENST00000371437|NDUFA1'] 44950 11947 IPAAIATA True PC9_epitope_Rep2 726.4275900940601 726.4270449679301 51.276 1 0.059385968323093535 0.00432745243643254 0.023107356420710237 ['ENSG00000144224|ENST00000272638|UBXN4'] 93081 7356 RPNDSRMLVA True PC9_epitope_Rep1 1157.59752603681 1157.5964299358602 33.106 2 0.059383848489934235 0.00432745243643254 0.023108396711160776 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 84817 7925 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.4652749679301 35.429 1 0.059375062296550964 0.00432745243643254 0.023112708916209188 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 90419 11097 REIFFPETA True NCI_RA007_Epitope_Rep3 1108.5553097883198 1108.5542099358602 50.753 2 0.05937445365295582 0.00432745243643254 0.02311300766150911 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 2694 13356 AESVQAFVV True H1975_Epitope_Rep2 948.4916469025998 948.49054993586 56.506 2 0.0593680568965913 0.00432745243643254 0.023116147643801408 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 133695 9577 VYASDRATF True PC9_epitope_Rep3 1028.4927095317598 1028.4916099358602 41.788 2 0.059350442242188994 0.00432745243643254 0.023124796171087474 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 40201 11297 HQGATPLVL True PC9_epitope_Rep4 934.5236157372199 934.52250993586 51.231 2 0.05934863049774282 0.00432745243643254 0.023125685876826098 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 111555 8591 TIAPALVSK True PC9_epitope_Rep4 898.5487678559 898.54766993586 40.526 2 0.05933787008352292 0.00432745243643254 0.023130970708210526 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 16914 19941 EFNSTPAVF True PC9_epitope_Rep5 1010.4709114580198 1010.4703749679301 81.758 1 0.0593310821673933 0.00432745243643254 0.023134305065688525 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 101479 18869 SLLDDLHSA True PC9_epitope_Rep1 969.47672511445 969.47562993586 77.364 2 0.05932744976326898 0.00432745243643254 0.023136089553238093 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 47199 4268 IVAGTLTNK True NCI_RA007_Epitope_Rep3 915.53893144819 915.53782993586 23.486 2 0.059309756064398284 0.00432745243643254 0.023144783708055405 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 84881 5584 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 26.519 1 0.059304808513121074 0.00432745243643254 0.02314721531806145 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 31929 10275 GEMVGALAA True H1975_Epitope_Rep2 817.4003893700499 817.3998449679301 44.529 1 0.059286601355364676 0.00432745243643254 0.023156165725468733 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 116348 8429 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 37.375 2 0.05927676823457017 0.00432745243643254 0.023161000870649016 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 34750 19071 GQFEELLRL True PC9_epitope_Rep6 1103.5975089534697 1103.59640993586 86.0 2 0.05926805240590549 0.00432745243643254 0.023165287387653104 ['ENSG00000108010|ENST00000331244|GLRX3'] 33243 8660 GKFQGFARL True NCI_RA007_Epitope_Rep4 1022.5661492555398 1022.56504993586 40.093 2 0.059267065673455424 0.00432745243643254 0.023165772716304548 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant'] 4755 12430 ALDLEIATYR True NCI_RA007_Epitope_Rep2 1163.6186383208699 1163.61807496793 52.96 1 0.05926513385232289 0.00432745243643254 0.023166722917693935 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 140281 16355 YRAPEVLL True PC9_epitope_Rep5 959.5440168286299 959.54290993586 67.907 2 0.059259385962263184 0.00432745243643254 0.023169550331529218 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 87967 21205 QRMDILDVL True PC9_epitope_Rep2 1101.5852300176098 1101.5841299358601 87.023 2 0.05925936064425168 0.00432745243643254 0.02316956278627041 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 117961 11922 TYAKQYEEF True PC9_epitope_Rep5 1177.52915461013 1177.52804993586 50.855 2 0.059257060503126846 0.00432745243643254 0.023170694324785624 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 35057 9347 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 40.892 2 0.05923312435557932 0.00432745243643254 0.023182472527842852 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 71689 7421 MEDDAVPAA True H1975_Epitope_Rep2 917.3800478482899 917.3794949679301 33.489 1 0.05923268365813783 0.00432745243643254 0.023182689431781235 ['ENSG00000174628|ENST00000695302|IQCK', 'ENST00000568300.6_1_16:19775348-19867867:+|nuORF'] 24493 13376 FAENNFTEL True NCI_RA007_Epitope_Rep3 1083.48728979815 1083.48618993586 59.884 2 0.05922486434626878 0.00432745243643254 0.0231865382734741 ['ENSG00000066336|ENST00000378538|SPI1', 'nc|ENSG00000066336|P17947-2|SPI1'] 111470 10032 THTTPVLL True PC9_epitope_Rep6 880.5018176634799 880.50072993586 49.157 2 0.05921755654731606 0.00432745243643254 0.02319013586189247 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 69023 21171 LTQEAILSLTV True PC9_epitope_Rep1 1186.6809042242598 1186.67980993586 86.267 2 0.05920966396578279 0.00432745243643254 0.023194021905235195 ['ENST00000592937.1_1_19:2477233-2477596:+|nuORF'] 104684 17459 SQTSATFQL True PC9_epitope_Rep5 981.4767251144499 981.47562993586 72.156 2 0.05920840734847302 0.00432745243643254 0.02319464067620134 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 133632 22238 VYAFSIENF True PC9_epitope_Rep2 1088.5178616504397 1088.51676993586 91.016 2 0.059202131626166526 0.00432745243643254 0.023197731129332978 ['nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS', 'ENST00000528557.5_1_1:26759436-26769365:+|nuORF'] 92769 13195 RPADVIFAT True PC9_epitope_Rep4 988.5341804209199 988.53308993586 58.652 2 0.05917610981198127 0.00432745243643254 0.02321054945523607 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 817 8012 ACFEPANQMVK True NCI_RA007_Epitope_Rep3 1236.56311467404 1236.56200993586 38.609 2 0.05917554060021877 0.00432745243643254 0.02321082992043567 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C'] 31915 12358 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43606993586 52.62 2 0.059173208420469386 0.00432745243643254 0.023211979077226753 ['ENSG00000100726|ENST00000262319|TELO2'] 96641 9825 SAIGLADPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 45.72 2 0.05914982296397374 0.00432745243643254 0.023223504870873775 ['ENSG00000186838|ENST00000335426|SELENOV'] 104791 19824 SQYGEIVNI True PC9_epitope_Rep3 1021.5080252427299 1021.5074749679301 81.487 1 0.05914395458648568 0.00432745243643254 0.02322639798489207 ['ENSG00000134597|ENST00000305536|RBMX2'] 95561 19353 RWSPVRPLVF True PC9_epitope_Rep2 1255.71896149883 1255.7173049037901 79.817 3 0.05913991149035473 0.00432745243643254 0.023228391424507847 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 96480 10438 SAAQPLNL True H1975_Epitope_Rep2 812.43921740692 812.4386649679301 45.165 1 0.05912318315119208 0.00432745243643254 0.023236640947439 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 21758 13192 ERTSFNYAM True PC9_epitope_Rep3 1117.4862442523297 1117.4851499358601 55.779 2 0.05910654446630222 0.00432745243643254 0.02324484889814043 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 29285 22393 FVAVSLPTL True PC9_epitope_Rep1 945.5535188831699 945.55242993586 90.953 2 0.05910297471347435 0.00432745243643254 0.023246610219133025 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 132900 13457 VVLVLAGR True PC9_epitope_Rep3 825.5436229058099 825.54252993586 56.808 2 0.05909574060266107 0.00432745243643254 0.023250179911272546 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 103616 12462 SPTGGFVDA True PC9_epitope_Rep1 849.3868474808899 849.3862949679301 52.8 1 0.05908787333301233 0.00432745243643254 0.023254062602695975 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 40564 6838 HRGTGIAL True PC9_epitope_Rep1 823.46643521427 823.46532993586 31.108 2 0.05908684397193646 0.00432745243643254 0.02325457066132815 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 103857 6959 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 34.005 2 0.05907394861967989 0.00432745243643254 0.023260936235880512 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 73467 13944 MVAPVTGNDV True PC9_epitope_Rep1 1001.48518162317 1001.48408993586 58.471 2 0.059067161398789085 0.00432745243643254 0.023264287269565878 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 78562 5308 NYQKRFQNL True NCI_RA007_Epitope_Rep3 1209.6254550368096 1209.6243499358602 27.888 2 0.05906038039306617 0.004343049842883785 0.023267635672623306 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 34761 18453 GQFGVGFYSA True PC9_epitope_Rep6 1031.4712458111896 1031.47014993586 83.621 2 0.05904439201985446 0.004343049842883785 0.023275532328773992 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 48910 15452 KEDPFVFIP True H1975_Epitope_Rep2 1090.5698972233 1090.56937496793 64.592 1 0.05903682409684264 0.004343049842883785 0.023279270974173087 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 73006 13741 MRAFADAL True PC9_epitope_Rep4 893.4429228883698 893.44182993586 60.753 2 0.05903599020068968 0.004343049842883785 0.023279682962313062 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 17556 11345 EHGPENIVM True PC9_epitope_Rep1 1024.46478053176 1024.4636899358602 48.517 2 0.05902991913193237 0.004343049842883785 0.02328268258619399 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 69923 15564 LVKDVFISA True PC9_epitope_Rep2 990.57498260374 990.57388993586 65.14 2 0.05901478003144639 0.004343049842883785 0.02329016411781933 ['ENSG00000008018|ENST00000262193|PSMB1'] 35794 15586 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 64.961 2 0.059013106683901945 0.004343049842883785 0.02329099119678068 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 86294 16914 QISDTSVVL True PC9_epitope_Rep4 960.51277627 960.51166993586 73.048 2 0.059009807905740876 0.004343049842883785 0.02329262174913359 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 106296 18328 STFPQFIKA True PC9_epitope_Rep1 1037.5545815123298 1037.5534899358602 75.287 2 0.05900134468958333 0.004343049842883785 0.023296805504729626 ['ENSG00000040487|ENST00000375153|SLC66A1'] 26034 6826 FGHGAEDSL True NCI_RA007_Epitope_Rep2 931.40356017419 931.40246993586 31.166 2 0.0589843210419916 0.004343049842883785 0.023305223141458643 ['ENSG00000173432|ENST00000356524|SAA1'] 108030 18638 SYADAFQFL True NCI_RA007_Epitope_Rep4 1060.4865615221602 1060.48546993586 80.621 2 0.058982242336499395 0.004343049842883785 0.023306251182559325 ['ENSG00000242732|ENST00000609883|RTL5'] 2574 8300 [Acetylation]-AEQVALSR True H1975_Epitope_Rep1 914.4821451643598 914.48159496793 36.858 1 0.05897860956798992 0.004343049842883785 0.02330804789735732 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 77879 9142 NVHAVFQEA True PC9_epitope_Rep2 1013.4930438849299 1013.49194993586 40.505 2 0.05897093772444911 0.004343049842883785 0.023311842693705745 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 138286 8829 YHDDDNSVL True PC9_epitope_Rep1 1076.44106788172 1076.43996993586 38.802 2 0.05894801177154083 0.004343049842883785 0.023323186118575243 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 92945 19395 RPGTAFELLEA True PC9_epitope_Rep2 1202.62953735774 1202.62844993586 79.981 2 0.05894140008369189 0.004343049842883785 0.023326458415931787 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 118126 21175 TYIGQGYII True PC9_epitope_Rep1 1026.53859709502 1026.53750993586 86.284 2 0.05894132793527544 0.004343049842883785 0.023326494126371278 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000489591.5_1_17:39969413-39975983:+|nuORF'] 25551 20053 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54788496793 83.926 1 0.058927670431504944 0.004343049842883785 0.023333254912220876 ['ENSG00000125356|ENST00000371437|NDUFA1'] 60287 4533 LGSALRPSTSR True NCI_RA007_Epitope_Rep2 1143.6360197205101 1143.6343649037901 22.26 3 0.05892677245732865 0.004343049842883785 0.023333699492925075 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 2816 7336 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.3740149679301 33.158 1 0.058920728297349644 0.004343049842883785 0.023336692114234597 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 90191 3648 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 18.984 2 0.05891834850054074 0.004343049842883785 0.02333787050937422 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 117649 13789 TVTNAVVTV True PC9_epitope_Rep2 902.50729696674 902.50618993586 58.324 2 0.05891711881170883 0.004343049842883785 0.02333847943099952 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 78497 11248 NYNNQSSNFGP True PC9_epitope_Rep5 1240.51087877704 1240.50978993586 48.256 2 0.058913645610884025 0.004343049842883785 0.02334019938069288 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 114315 22864 TPQSIFIFA True PC9_epitope_Rep1 1022.5436824754598 1022.5431749679301 92.739 1 0.05890998080256225 0.004343049842883785 0.023342014340381058 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 6317 4505 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 23.806 2 0.05889688215271133 0.004343049842883785 0.023348502363647036 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 105260 20786 SRLDSVLLL True PC9_epitope_Rep5 1014.6073453611799 1014.60624993586 85.005 2 0.058895617587135476 0.004343049842883785 0.023349128814955804 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 1730 5722 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 27.039 2 0.05888416277893926 0.004343049842883785 0.023354804091244873 ['ENSG00000161847|ENST00000617231|RAVER1'] 64433 7601 LPNNVKTAV True PC9_epitope_Rep1 954.5498304850599 954.54872993586 34.059 2 0.058884077355753336 0.004343049842883785 0.023354846418805256 ['ENSG00000261456|ENST00000568584|TUBB8'] 104834 13953 SRAGLQFPV True PC9_epitope_Rep6 973.53451477409 973.53340993586 65.523 2 0.058881193055075526 0.004343049842883785 0.02335627564323422 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 116516 18181 TTSDIDYAL True PC9_epitope_Rep5 997.46040634397 997.45930993586 74.943 2 0.058873064484571525 0.004343049842883785 0.02336030392791265 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 111213 16056 THISPNAIF True PC9_epitope_Rep1 998.5185303567799 998.51742993586 66.573 2 0.05887145694169979 0.004343049842883785 0.023361100654438954 ['ENSG00000125398|ENST00000245479|SOX9'] 134394 18099 VYPGDPLRF True PC9_epitope_Rep4 1062.5498304850598 1062.5487299358601 77.684 2 0.05886319169156316 0.004343049842883785 0.02336519744744549 ['ENSG00000170892|ENST00000396388|TSEN34'] 104972 9217 SRDKSFLL True PC9_epitope_Rep4 964.5341804209199 964.53308993586 43.051 2 0.05886193794759135 0.004343049842883785 0.02336581894110651 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E'] 30581 8777 GAIGSPVRL True H1975_Epitope_Rep2 868.51305105352 868.51194993586 38.724 2 0.05885640327684235 0.004343049842883785 0.0233685627132156 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant'] 30982 18960 GASENIVIQV True PC9_epitope_Rep5 1028.5502244078798 1028.54912993586 77.954 2 0.058853851474998733 0.004343049842883785 0.023369827848665113 ['ENSG00000106804|ENST00000223642|C5'] 136037 15472 WRDPDEPVL True PC9_epitope_Rep2 1125.5454733806098 1125.54436993586 64.79 2 0.058852473018678714 0.004343049842883785 0.023370511287306273 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 85915 12455 QHGGFVVTV True PC9_epitope_Rep4 942.4923156089399 942.49120993586 55.715 2 0.0588512969025993 0.004343049842883785 0.023371094420006407 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 87362 2543 QPSQPVTSA True PC9_epitope_Rep6 913.4505103666099 913.4499649679301 14.71 1 0.05884577414137909 0.004343049842883785 0.023373832849102806 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 55352 7435 LAELEQER True PC9_epitope_Rep2 986.50327421546 986.50216993586 33.974 2 0.0588382946561356 0.004343049842883785 0.02337754197298796 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 31602 5958 GEEQPPQPP True H1975_Epitope_Rep3 977.4454249861699 977.44432993586 27.929 2 0.058811992998024254 0.004343049842883785 0.023390589376063958 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 128630 10165 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43833496793 44.053 1 0.05880464771760982 0.004343049842883785 0.02339423431348173 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 90606 14306 REMIPFAVV True NCI_RA007_Epitope_Rep5 1060.57393705792 1060.57282993586 61.721 2 0.05877612372181421 0.004343049842883785 0.023408393623761042 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 120426 4806 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 23.575 2 0.05877533553728327 0.004343049842883785 0.02340878498899014 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 1951 6434 AEINGTMNA True H1975_Epitope_Rep2 919.4069313024701 919.4063849679301 29.668 1 0.058761977478798195 0.004343049842883785 0.023415418704428488 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 117039 6617 TVIAKVNNV True PC9_epitope_Rep6 956.5654805492 956.56438993586 34.166 2 0.058757043542789725 0.004343049842883785 0.02341786936696337 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 108465 17617 SYLTSASSL True PC9_epitope_Rep1 927.45492704071 927.45382993586 72.556 2 0.05873628678243172 0.004343049842883785 0.02342818170199148 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 90198 2825 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 15.012 2 0.058730023628802065 0.004343049842883785 0.023431294159995498 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 2235 12386 AENELGVVV True H1975_Epitope_Rep2 928.4865615221598 928.48601496793 52.731 1 0.05872871076672472 0.004343049842883785 0.02343194663100562 ['ENSG00000171311|ENST00000370902|EXOSC1'] 114441 13910 TPVETVNIS True PC9_epitope_Rep5 958.49712620586 958.4965749679301 58.525 1 0.05872827737102373 0.004343049842883785 0.023432162025212266 ['ENSG00000169676|ENST00000304374|DRD5'] 39046 11628 HHSGNTYFL True PC9_epitope_Rep3 1074.48829285766 1074.4871899358602 49.744 2 0.05872681568490015 0.004343049842883785 0.02343288848481323 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 96544 19777 SADTTILFV True PC9_epitope_Rep6 965.50696261357 965.50586993586 88.73 2 0.058720910009120435 0.004343049842883785 0.023435823820351732 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 35819 4948 GTLASVYHK True NCI_RA007_Epitope_Rep2 974.5185303567802 974.51742993586 23.867 2 0.058718626242194656 0.004343049842883785 0.023436959025040602 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 14049 13167 DRMVGQVL True PC9_epitope_Rep5 916.4800366730798 916.47892993586 55.651 2 0.05871838747418186 0.004343049842883785 0.02343707771366333 ['ENSG00000130741|ENST00000253039|EIF2S3'] 71495 17364 LYYDAIWHF True NCI_RA007_Epitope_Rep4 1226.5760452328998 1226.57494993586 75.2 2 0.05871276576914201 0.004343049842883785 0.023439872351320567 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 121811 16994 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 70.527 2 0.05871232452893746 0.004343049842883785 0.023440091711544587 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 6528 5763 APTGDLPRA True PC9_epitope_Rep6 896.4715801643599 896.47048993586 30.339 2 0.05871181172768864 0.004343049842883785 0.023440346650303437 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 45445 13692 IQIM[Oxidation]KVEEI True PC9_epitope_Rep2 1117.60529713629 1117.6041899358602 57.956 2 0.05870644995012582 0.004343049842883785 0.023443012404800626 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 37811 19217 GYGFVSFYNK True PC9_epitope_Rep5 1180.5553097883196 1180.5542099358602 78.959 2 0.05868938076183757 0.004343049842883785 0.02345150065202261 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 30484 10780 GAGAPVYL True H1975_Epitope_Rep3 746.3962899657799 746.39574496793 46.545 1 0.058676104350226105 0.004343049842883785 0.023458104738302635 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 120781 14966 VELDNMPLR True PC9_epitope_Rep5 1085.5539298893298 1085.55282993586 62.569 2 0.05867056769503526 0.004343049842883785 0.02346085933589601 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant'] 38082 7178 HAVGPSTSL True PC9_epitope_Rep1 867.4450310633501 867.44392993586 32.421 2 0.058657509081163746 0.004343049842883785 0.02346735742273677 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 52815 12708 KPAEFTIDA True PC9_epitope_Rep3 990.5022115862998 990.50110993586 53.904 2 0.058656976629456695 0.004343049842883785 0.023467622410289032 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 15313 18877 EAFQLFDR True PC9_epitope_Rep3 1024.4977949121999 1024.49668993586 77.834 2 0.058656917465353134 0.004343049842883785 0.023467651854912973 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 95778 13905 RYIDRIHIF True PC9_epitope_Rep6 1231.68257599011 1231.68094490379 65.325 3 0.0586395674254198 0.004343049842883785 0.02347628802096372 ['ENSG00000174231|ENST00000304992|PRPF8'] 42651 8249 IEHGDLELA True H1975_Epitope_Rep2 995.4923751785899 995.49126993586 36.683 2 0.05862879453817974 0.004343049842883785 0.023481651791418673 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 4433 10259 AIRLELQGPR True PC9_epitope_Rep4 1151.6774906096698 1151.67583490379 47.145 3 0.058610760347381684 0.004343049842883785 0.023490633421204825 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 32107 11655 GETIFVTA True NCI_RA007_Epitope_Rep3 836.42798401688 836.42743496793 52.965 1 0.05859507898939889 0.004343049842883785 0.023498445796318497 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 26858 14726 FLDDSTALY True H1975_Epitope_Rep2 1043.48114178855 1043.48057496793 61.805 1 0.0585919488473414 0.004343049842883785 0.02350000549998327 ['ENSG00000100558|ENST00000216446|PLEK2'] 89151 10169 QVRDVIIAA True PC9_epitope_Rep6 983.5763795860698 983.57528993586 49.745 2 0.058591627685401035 0.004343049842883785 0.023500165535561408 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 76780 18321 NRAATLMML True PC9_epitope_Rep5 1019.5256069665099 1019.52450993586 75.486 2 0.05858019361953754 0.004343049842883785 0.02350586379596916 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 134296 22891 VYNPVIYVF True PC9_epitope_Rep3 1112.5906326678798 1112.5895299358601 93.316 2 0.058579724029972934 0.004343049842883785 0.023506097846586492 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 85786 5164 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 25.239 2 0.058566390586731056 0.004343049842883785 0.023512744321345123 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 31433 11389 GEAIPALAA True H1975_Epitope_Rep2 811.44396843419 811.44341496793 48.857 1 0.05856345445134237 0.004343049842883785 0.023514208159676857 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 90178 3269 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 16.599 2 0.05855209288572034 0.004343049842883785 0.023519873356100913 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 45238 18291 IPTNIPGL True PC9_epitope_Rep6 823.4803539429099 823.47924993586 82.999 2 0.05854682534950047 0.004343049842883785 0.02352250031824976 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 139148 14478 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 60.846 2 0.058543268188692384 0.004343049842883785 0.023524274453240516 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 17290 14168 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50708496793 62.402 1 0.05854286357319279 0.004343049842883785 0.023524476263032078 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 18849 9229 ELDPSNTKALY True H1975_Epitope_Rep2 1249.61903224369 1249.61792993586 40.454 2 0.05854194931874684 0.004343049842883785 0.02352493227087371 ['ENSG00000171497|ENST00000307720|PPID'] 115886 5009 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59746993586 24.35 2 0.05854058935519116 0.004343049842883785 0.023525610602403314 ['ENSG00000204560|ENST00000376442|DHX16'] 125226 9134 VIISAPSAD True H1975_Epitope_Rep3 871.46509780159 871.46454496793 40.123 1 0.05853866993433363 0.004343049842883785 0.023526568013920692 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 84232 14552 PYMAKFVVF True NCI_RA007_Epitope_Rep3 1100.5728744287599 1100.5717699358602 64.556 2 0.05853226451254404 0.004343049842883785 0.02352976330891355 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 2435 5383 AEQIKHILA True H1975_Epitope_Rep3 1021.5920296502098 1021.59092993586 25.773 2 0.05851743038096669 0.004343049842883785 0.023537164712865877 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000458298.1_1_6:86137181-86137394:-|nuORF', 'ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 85790 5888 QHDPSAVAV True PC9_epitope_Rep3 922.4508447197799 922.44974993586 27.712 2 0.0585149090099525 0.004343049842883785 0.02353842294640231 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 103703 6465 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 29.841 2 0.05850990556742 0.004343049842883785 0.023540919982720076 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 89966 10001 RDFVLPTAA True NCI_RA007_Epitope_Rep3 988.5341804209198 988.53308993586 46.431 2 0.058492708830927366 0.004343049842883785 0.023549504082181483 ['SLC25A24|p.I172Mfs*3|1|0.53|ENSG00000085491|chr1:108157615-108157615|A/-|frameshift_variant', 'ENSG00000085491|ENST00000565488|SLC25A24'] 27831 11661 FQDEVAKAQQL True PC9_epitope_Rep2 1275.64591569787 1275.6448099358602 50.185 2 0.05848949629067693 0.004343049842883785 0.02355110800163314 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 65010 11915 LQIDNARLA True PC9_epitope_Rep2 1012.5665431783599 1012.56544993586 51.156 2 0.058484125675682834 0.004343049842883785 0.023553789600773974 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 47564 17965 IVVDNVPQV True PC9_epitope_Rep1 981.5494961318899 981.54838993586 73.895 2 0.05848191494759374 0.004343049842883785 0.023554893518842938 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 47371 15943 IVIDPKNPL True PC9_epitope_Rep2 1007.60153170475 1007.60042993586 66.573 2 0.05847394611577469 0.004343049842883785 0.023558873112259668 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 104039 4461 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 22.255 2 0.058471124846957365 0.004343049842883785 0.02356028218557549 ['ENSG00000130935|ENST00000253247|NOL11'] 1704 12439 AEGNEFWSA True H1975_Epitope_Rep3 1009.41412485789 1009.41357496793 53.038 1 0.05846939215580198 0.004343049842883785 0.02356114761031523 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953408-64953522:+|nuORF'] 117083 22682 TVISILNTI True PC9_epitope_Rep1 972.58554728744 972.58444993586 92.05 2 0.05843855735361568 0.00435247403787416 0.023576553450041945 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 21803 9528 ERYKEVAEL True PC9_epitope_Rep3 1135.5873381925899 1135.58569490379 41.596 3 0.05842103385015776 0.00435247403787416 0.02358531270469455 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 1289 5466 AEDPGPAVA True H1975_Epitope_Rep2 825.38684748089 825.3862949679301 26.051 1 0.05841745697150679 0.00435247403787416 0.023587100997198983 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 85896 13293 QHFEFEYQT True PC9_epitope_Rep6 1227.5196525555898 1227.5185499358602 62.786 2 0.05841405926512999 0.00435247403787416 0.023588799824874097 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 71992 5638 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 26.686 2 0.058412901974587296 0.00435247403787416 0.023589378486804986 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 134300 10286 VYNPVRAEW True NCI_RA007_Epitope_Rep3 1132.5665431783598 1132.5654499358602 47.531 2 0.058390348232612875 0.00435247403787416 0.023600658254453833 ['ENSG00000165572|ENST00000379485|KBTBD6'] 140435 12384 YRGNVGVVL True PC9_epitope_Rep2 975.5501648382299 975.54906993586 52.944 2 0.058387086084587383 0.00435247403787416 0.023602290152526628 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 71867 4089 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 20.818 2 0.05838312171276577 0.00435247403787416 0.023604273477714006 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 48022 14354 IYLPEVRKI True PC9_epitope_Rep2 1129.68593003505 1129.68427490379 60.474 3 0.05838081772923455 0.00435247403787416 0.023605426201079173 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 52870 10686 KPFGQVIST True PC9_epitope_Rep2 975.5389314481899 975.53782993586 46.416 2 0.05836698321012566 0.00435247403787416 0.023612348927889874 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 135422 20268 WHIDTILHV True PC9_epitope_Rep5 1132.60292868708 1132.60129490379 83.012 3 0.05836217255128953 0.00435247403787416 0.023614756590058867 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000556741.5_1_14:24032738-24033292:-|nuORF'] 87207 15032 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49618496793 62.64 1 0.05835931272675905 0.00435247403787416 0.023616187994662384 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 86480 5789 QKSLSLSPG True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50144993586 28.891 2 0.0583543124487039 0.00435247403787416 0.023618690932142007 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 9112 9266 AVIREIQNA True PC9_epitope_Rep5 1012.56654317836 1012.56544993586 40.59 2 0.05834292600772463 0.00435247403787416 0.023624391423287837 ['ENSG00000105726|ENST00000357324|ATP13A1', 'ATP13A1|p.M861Vfs*15|1|0.11|ENSG00000105726|chr19:19649617-19649618|AT/-|frameshift_variant', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000491221.1_1_19:19762333-19764718:-|nuORF', 'ENST00000469641.5_1_19:19762333-19763700:-|nuORF', 'ENST00000473243.5_1_19:19762333-19765368:-|nuORF'] 30481 10882 GAGAPVYL True H1975_Epitope_Rep2 746.3962899657799 746.39574496793 46.886 1 0.05832969415818656 0.00435247403787416 0.02363101736527887 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 100512 23028 SLASLLVSV True PC9_epitope_Rep1 887.5327834385901 887.53168993586 93.376 2 0.05832627559814771 0.00435247403787416 0.02363272950739807 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 45260 2559 IPVEQKEGA True PC9_epitope_Rep4 969.5131106231698 969.51200993586 14.754 2 0.058317986307101256 0.00435247403787416 0.023636881560257186 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 128739 5611 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 26.968 2 0.05831050788662335 0.00435247403787416 0.02364062802112475 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 99009 10588 SHDSTSQLYTV True PC9_epitope_Rep2 1236.5622456435601 1236.5611499358602 46.043 2 0.05830859434279114 0.00435247403787416 0.023641586734858736 ['ENSG00000143815|ENST00000272163|LBR'] 15975 6298 EDQTEYLEERR True NCI_RA007_Epitope_Rep1 1466.6637505899798 1466.6620949037901 28.526 3 0.05829140507330508 0.00435247403787416 0.023650200394606996 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 53369 12443 KQTALVELLK True PC9_epitope_Rep4 1141.7070594024499 1141.7059699358601 55.67 2 0.058290824454546857 0.00435247403787416 0.023650491396317627 ['CON__P02769'] 35971 21140 GTVEQIVYL True PC9_epitope_Rep1 1020.5491617787197 1020.54806993586 86.145 2 0.05825357189074962 0.00435247403787416 0.023669168889985947 ['ENSG00000182481|ENST00000330459|KPNA2'] 48847 6879 KEADLPMTAA True NCI_RA007_Epitope_Rep3 1045.51139637101 1045.51028993586 34.166 2 0.05824998923362288 0.00435247403787416 0.02367096584884301 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 93033 8850 RPLLKAITA True PC9_epitope_Rep2 981.63350053937 981.63240993586 39.393 2 0.05824177469976615 0.00435247403787416 0.02367508649246083 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 29677 22921 FVLGHFILL True PC9_epitope_Rep1 1057.63243791021 1057.63134993586 92.964 2 0.05824100420665459 0.00435247403787416 0.02367547302707947 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 73995 9182 NDEELNKLLGK True NCI_RA007_Epitope_Rep3 1271.6721304457099 1271.67049490379 43.207 3 0.05823635030501219 0.00435247403787416 0.023677807879730648 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 9788 15141 AYIQEFQEF True NCI_RA007_Epitope_Rep3 1173.5342399905699 1173.5331499358601 67.068 2 0.058233926213246204 0.00435247403787416 0.023679024124197923 ['ENST00000528308.1_1_11:7507082-7509735:+|nuORF', 'ENSG00000183801|ENST00000329293|OLFML1'] 61274 23563 LIPEYLNFI True PC9_epitope_Rep5 1120.61684741572 1120.61574993586 95.621 2 0.05821690186048643 0.00435247403787416 0.023687567383904033 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 76900 14785 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.5503449679301 61.69 1 0.058199592120433595 0.00435247403787416 0.023696256724991656 ['ENSG00000013523|ENST00000251089|ANGEL1'] 97279 9344 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 40.903 1 0.058193486025142384 0.00435247403787416 0.023699322622274806 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 65844 17093 LSDLGLLSY True H1975_Epitope_Rep2 979.52261267771 979.5220649679301 71.022 1 0.05818680896947458 0.00435247403787416 0.023702675613124606 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 52790 6903 KNLQTVNVDEN True PC9_epitope_Rep1 1272.6309939097198 1272.62988993586 31.358 2 0.05818655731030786 0.00435247403787416 0.023702801996235274 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 68641 20765 LTIEDGIFEV True PC9_epitope_Rep6 1134.58085582982 1134.5802749679299 92.631 1 0.05818590497019869 0.00435247403787416 0.023703129603965423 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 104189 21039 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49618496793 85.986 1 0.058177173290480715 0.00435247403787416 0.023707515082780913 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 110237 9515 TEQYPQGLGP True H1975_Epitope_Rep1 1088.5138388991597 1088.51274993586 41.522 2 0.0581747635118612 0.00435247403787416 0.023708725521649498 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'ENST00000591718.1_1_19:55966993-55972941:-|nuORF'] 127691 10300 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.49088993586 44.607 2 0.058174029603392054 0.00435247403787416 0.023709094177161893 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 137593 7411 YEERVQAVV True H1975_Epitope_Rep2 1091.56112344475 1091.56002993586 33.449 2 0.05817174486570362 0.00435247403787416 0.0237102418755597 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 44669 20420 ILSSNIISV True PC9_epitope_Rep3 944.55424715916 944.55314993586 83.799 2 0.05817010585346593 0.00435247403787416 0.02371106523600524 ['nc|ENSG00000204385|Q53GD3-3|SLC44A4', 'nc|ENSG00000204385|Q53GD3-4|SLC44A4', 'ENSG00000204385|ENST00000229729|SLC44A4'] 1301 7946 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 35.534 1 0.058169858150566515 0.00435247403787416 0.023711189672212786 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 29347 18322 FVDGSAIQV True PC9_epitope_Rep1 934.47599683846 934.47488993586 75.264 2 0.058165753403364925 0.00435247403787416 0.02371325182222193 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 1260 7821 AEDGPPTVAP True H1975_Epitope_Rep2 952.45017601344 952.44962496793 35.032 1 0.05813277701983245 0.00435247403787416 0.023729824458570546 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 17291 14256 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50708496793 62.739 1 0.05812651456627685 0.00435247403787416 0.02373297290863572 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 48213 15871 IYPVKYTQTF True PC9_epitope_Rep2 1258.65977485686 1258.6586699358602 66.305 2 0.05812578211950426 0.00435247403787416 0.023733341171176973 ['ENSG00000112378|ENST00000421351|PERP'] 96177 8026 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.5550749037902 37.638 3 0.05811788466406258 0.00435247403787416 0.023737312214876488 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 127060 4641 VLSSIEQK True NCI_RA007_Epitope_Rep2 902.50729696674 902.50618993586 22.679 2 0.05810686190488126 0.00435247403787416 0.023742855749169466 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 41415 18234 HYGLPVVV True PC9_epitope_Rep5 882.49633836022 882.49578496793 75.15 1 0.05809020863162099 0.00435247403787416 0.023751233192331283 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 54082 20615 KVLDFEHFL True PC9_epitope_Rep5 1146.60734536118 1146.60568490379 84.345 3 0.0580870375297758 0.00435247403787416 0.02375282872158757 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 75088 15518 NHVPVITTL True PC9_epitope_Rep1 992.5654805492001 992.56438993586 64.513 2 0.058085375986256224 0.00435247403787416 0.023753664760443834 ['ENST00000609454.5_1_22:38228707-38236239:-|nuORF', 'ENST00000498417.5_1_22:38228707-38229954:-|nuORF', 'ENSG00000100124|ENST00000215941|ANKRD54'] 40512 12899 HRDWVSSQL True PC9_epitope_Rep1 1126.55195574338 1126.5503249037902 54.489 3 0.058066719288291206 0.00435247403787416 0.02376305408349583 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000533676.5_1_11:61641288-61643947:-|nuORF', 'ENST00000529404.5_1_11:61643581-61643947:-|nuORF'] 55212 14325 LADALQELR True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 60.365 2 0.05806296556592151 0.00435247403787416 0.023764943619314884 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 47824 13953 IYGYVAEQF True NCI_RA007_Epitope_Rep4 1088.5178616504397 1088.51727496793 60.947 1 0.05806260783739399 0.00435247403787416 0.023765123698578135 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 42722 16911 IEKTMSEMVT True PC9_epitope_Rep2 1167.55154693083 1167.5504499358601 70.291 2 0.058054098123739 0.00435247403787416 0.023769407822897673 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 137843 4254 YESDVMGRGHA True NCI_RA007_Epitope_Rep4 1220.5244206662 1220.52277490379 22.69 3 0.05805303971322712 0.00435247403787416 0.02376994071731682 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant'] 99324 14386 SHSPPLLQV True PC9_epitope_Rep3 976.53418042092 976.53308993586 60.428 2 0.05805082789895669 0.00435247403787416 0.02377105436886094 ['ENSG00000165030|ENST00000297689|NFIL3'] 95671 10920 RYFDPANGKF True PC9_epitope_Rep6 1213.5880068989297 1213.58635490379 52.87 3 0.058045582320350966 0.00435247403787416 0.023773695714114577 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 8623 13912 AVAAELVSA True PC9_epitope_Rep2 829.4545331178899 829.45342993586 58.791 2 0.05803394357803363 0.00435247403787416 0.023779557207094477 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF'] 60625 17051 LHILAEQSL True PC9_epitope_Rep5 1022.5760452329 1022.57494993586 70.606 2 0.05801584359210949 0.00435247403787416 0.023788675309514482 ['ENSG00000181004|ENST00000314218|BBS12'] 121029 4861 VEQIEAGTPGR True H1975_Epitope_Rep3 1155.5884008217497 1155.58730993586 23.823 2 0.05800701569874897 0.00435247403787416 0.023793123625281347 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 43478 11995 IGIVGLPNVGK True H1975_Epitope_Rep1 1065.65462990677 1065.6535299358602 51.146 2 0.05800623062288464 0.00435247403787416 0.023793519256218695 ['ENSG00000138430|ENST00000284719|OLA1', 'nc|ENSG00000138430|Q9NTK5-3|OLA1'] 128643 14091 VPVEQAVSV True PC9_epitope_Rep5 926.5072969667398 926.50618993586 59.212 2 0.057994433690954895 0.00435247403787416 0.02379946491748731 ['ENSG00000131899|ENST00000316843|LLGL1'] 4597 10570 AKREQEVTV True PC9_epitope_Rep1 1058.5720224816198 1058.57092993586 45.548 2 0.057994374832453094 0.00435247403787416 0.023799494585587208 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 99323 14296 SHSPPLLQV True PC9_epitope_Rep3 976.53418042092 976.53308993586 60.076 2 0.05798743475672025 0.00435247403787416 0.023802993021523847 ['ENSG00000165030|ENST00000297689|NFIL3'] 87811 7122 QREAEQSNVAL True PC9_epitope_Rep3 1243.61567819875 1243.61458993586 32.403 2 0.057977496463328934 0.00435247403787416 0.023808003646652174 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 40642 7710 HRNEVTVEL True PC9_epitope_Rep4 1095.56727145435 1095.5661699358602 37.045 2 0.057972290448013344 0.00435247403787416 0.023810628763800874 ['ENSG00000102753|ENST00000261667|KPNA3'] 43979 15964 IIEPSLRQLAQ True PC9_epitope_Rep4 1266.72958575218 1266.7284899358601 69.335 2 0.05797223895575564 0.00435247403787416 0.02381065472992351 ['ENSG00000221983|ENST00000442744|UBA52'] 117171 22094 TVLEQVLPI True PC9_epitope_Rep2 1010.6011973515798 1010.60010993586 90.457 2 0.05796883009231498 0.00435247403787416 0.023812373782670027 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 124489 8445 VGVNGFGR True PC9_epitope_Rep3 804.4242360491198 804.42312993586 37.446 2 0.05796522232355291 0.00435247403787416 0.023814193263775197 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 89611 21633 QYPVYWDHLEF True PC9_epitope_Rep3 1495.67721582615 1495.67610993586 88.51 2 0.05795496248630426 0.00435247403787416 0.02381936822560189 ['ENSG00000090487|ENST00000204566|SPG21'] 105269 21307 SRLGLPLLL True PC9_epitope_Rep2 980.63825156664 980.63714993586 87.421 2 0.05794863931057512 0.00435247403787416 0.02382255808156208 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 103846 7921 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 35.448 2 0.05794840025295672 0.00435247403787416 0.023822678686688956 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 22888 19686 EVDPSDWIGLY True H1975_Epitope_Rep2 1292.5924831426798 1292.5913899358602 81.684 2 0.057941303622484716 0.00435247403787416 0.023826259205487782 ['ENSG00000138411|ENST00000644978|HECW2'] 125185 16115 VIIDDHPEVTV True PC9_epitope_Rep2 1235.63976768827 1235.6386699358602 67.245 2 0.05793106267974608 0.00435247403787416 0.02383142700895493 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 45308 18568 IPYHIVNIV True PC9_epitope_Rep4 1066.6175161220601 1066.61697496793 79.499 1 0.057919995844366266 0.00435247403787416 0.02383701271831941 ['ENSG00000031698|ENST00000234677|SARS1'] 1736 11308 AEGPVAVVV True H1975_Epitope_Rep1 839.4752685624699 839.47472496793 48.474 1 0.057917283158942824 0.00435247403787416 0.02383838205979919 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 104364 20344 SQITEYFSV True PC9_epitope_Rep4 1072.5076908895599 1072.5065899358601 86.399 2 0.05791136350615393 0.00435247403787416 0.023841370499873345 ['ENSG00000158435|ENST00000289382|CNOT11'] 87434 16037 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.46262993586 66.675 2 0.05790976269450345 0.00435247403787416 0.02384217870184294 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 59581 11540 LFVGGIKED True PC9_epitope_Rep6 976.5229470308799 976.52184993586 55.479 2 0.05790785068466689 0.00435247403787416 0.023843144051028144 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 76987 9377 NRFSDHVAL True PC9_epitope_Rep2 1057.53049202281 1057.52938993586 41.404 2 0.05788526162672508 0.00435247403787416 0.023854551658520875 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'ENST00000473076.1_1_1:182850471-182852465:+|nuORF'] 110967 19706 THALPIPVI True PC9_epitope_Rep2 959.5804023373499 959.57930993586 81.187 2 0.057884726939740914 0.00435247403787416 0.02385482173853613 ['ENSG00000136628|ENST00000366923|EPRS1'] 46871 20057 ITLDGGAIYEA True PC9_epitope_Rep5 1121.5604547384098 1121.5593499358602 82.203 2 0.05787897173390825 0.00435247403787416 0.023857728972048454 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF', 'ENST00000473501.1_1_3:196753297-196754890:-|nuORF'] 43825 16887 IHSEPLGVVL True PC9_epitope_Rep4 1062.60734536118 1062.6062499358602 72.94 2 0.057877785046575675 0.00435247403787416 0.023858328465298336 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 7138 6231 AQYDELAR True NCI_RA007_Epitope_Rep2 964.4614094034799 964.46030993586 28.843 2 0.0578762770158099 0.00435247403787416 0.023859090315215957 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000402024.2_1_6:116778987-116779080:-|nuORF', 'ENST00000398525.2_1_2:65894186-65894534:+|nuORF', 'ENST00000436075.1_1_22:20837457-20837766:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 74735 8734 NHANGLTL True PC9_epitope_Rep3 838.4297153523801 838.42860993586 38.548 2 0.05787557386239912 0.00435247403787416 0.023859445552488933 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 9712 14656 AYGLVSATF True NCI_RA007_Epitope_Rep4 927.47018318203 927.46963496793 63.783 1 0.0578747260719154 0.00435247403787416 0.023859873867644456 ['ENSG00000156875|ENST00000370152|MFSD14A'] 85204 8837 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57797496793 38.914 1 0.05787332965862101 0.00435247403787416 0.023860579369618676 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 113212 11796 TLQKEGVIGV True PC9_epitope_Rep1 1042.6022599807397 1042.60116993586 50.243 2 0.05786693649235581 0.00435247403787416 0.02386380959426056 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 17298 15983 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 66.469 2 0.057858693708713736 0.00435247403787416 0.02386797494551626 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 1929 13471 AEILELAGNAA True H1975_Epitope_Rep3 1070.5607890915799 1070.56027496793 57.09 1 0.05785640610951503 0.00435247403787416 0.02386913106189847 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 131590 11360 VTLKAEQTI True PC9_epitope_Rep4 1001.5757108797299 1001.5746099358599 51.47 2 0.05785399145661361 0.00435247403787416 0.02387035144427935 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant'] 57677 8041 LEEGEGPIA True H1975_Epitope_Rep2 913.4392769765699 913.43872496793 35.879 1 0.057819612101095506 0.00435247403787416 0.02388773314633983 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509178.5_1_5:134117763-134126202:+|nuORF'] 23868 23724 EYIQFVPLL True PC9_epitope_Rep5 1120.6168474157198 1120.61627496793 96.235 1 0.057818644765256444 0.00435247403787416 0.023888222383173115 ['ENSG00000179409|ENST00000319004|GEMIN4'] 9436 21957 AVVEFLTSV True PC9_epitope_Rep1 963.5276980581499 963.52660993586 89.276 2 0.05781857194255084 0.00435247403787416 0.02388825921413092 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 99336 8401 SHSSFQASL True PC9_epitope_Rep4 962.44575933934 962.44466993586 39.777 2 0.05781330598980189 0.00435247403787416 0.023890922669406844 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 90264 9557 REEFPTLQA True H1975_Epitope_Rep1 1089.5454733806098 1089.54487496793 41.686 1 0.05781246606065925 0.00435247403787416 0.023891347520309164 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 22186 20500 ESVAILPQL True PC9_epitope_Rep5 968.55424715916 968.55314993586 83.892 2 0.0578077715740128 0.00435247403787416 0.023893722200151662 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 64060 4777 LPASETPKA True PC9_epitope_Rep3 912.4916469025999 912.49054993586 23.471 2 0.05780528102905592 0.00435247403787416 0.023894982115260113 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1'] 7504 12277 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep1 1084.4746768895598 1084.47417496793 52.247 1 0.057790717681902935 0.00435247403787416 0.023902350616566308 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 28000 17015 FQLESVNKL True PC9_epitope_Rep5 1076.5866099166 1076.58550993586 70.467 2 0.05778290147591151 0.00435247403787416 0.023906306169586063 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 96567 12451 SAFAPFGK True PC9_epitope_Rep2 823.42283906679 823.42174993586 53.199 2 0.05778126339913415 0.00435247403787416 0.023907135227482244 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000470635.1_1_10:121340019-121341495:-|nuORF'] 13378 7676 DLYDAGVK True NCI_RA007_Epitope_Rep1 879.43379767331 879.43270993586 33.85 2 0.05776766576723765 0.00435247403787416 0.023914018221129683 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 107888 13107 SVVPDVRSV True PC9_epitope_Rep3 956.52909504048 956.52798993586 55.439 2 0.05775087297443476 0.00435247403787416 0.023922521053900213 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 77500 13955 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41816993586 58.833 2 0.057743610470368974 0.00435247403787416 0.023926199185929444 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 11945 9984 DHMVSPTAV True PC9_epitope_Rep3 955.44331681119 955.44220993586 43.359 2 0.05773974985646962 0.00435247403787416 0.023928154622059074 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10'] 2726 11599 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.47964993586 49.682 2 0.057738670694740535 0.00435247403787416 0.02392870125321285 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 35917 5689 GTSEFITGK True NCI_RA007_Epitope_Rep3 938.4709114580198 938.46980993586 29.358 2 0.05773643084148082 0.00435247403787416 0.02392983584918703 ['ENSG00000110002|ENST00000456829|VWA5A', 'VWA5A|p.R449S|1|0.19|ENSG00000110002|chr11:124135022-124135022|G/C|missense_variant'] 22443 6908 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54316490379 31.492 3 0.0577346329004448 0.00435247403787416 0.02393074663013436 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 61275 21385 LIPEYLNFI True PC9_epitope_Rep6 1120.61684741572 1120.61574993586 95.13 2 0.05773148242036285 0.00435247403787416 0.023932342641004904 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 78479 14112 NYNEKIYEL True PC9_epitope_Rep4 1184.5713537752797 1184.5702499358601 62.187 2 0.05772499142594817 0.00435247403787416 0.023935631236875254 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 93695 4880 RQVASHVGL True NCI_RA007_Epitope_Rep2 965.5406627836898 965.53956993586 23.605 2 0.05772193442960957 0.00435247403787416 0.023937180174626142 ['ENSG00000110107|ENST00000227524|PRPF19'] 62713 5014 LLLNNGAK True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 25.99 2 0.05771894490512602 0.00435247403787416 0.023938695013175526 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF', 'AKR1B1|p.P14R|1|0.24|ENSG00000085662|chr7:134459022-134459022|G/C|missense_variant'] 73749 18517 NADPILISLK True PC9_epitope_Rep3 1082.63356010902 1082.6324699358602 76.444 2 0.05771728594434485 0.00435247403787416 0.02393953567188538 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 92995 6475 RPKPIITSV True PC9_epitope_Rep4 1009.62841515893 1009.62730993586 32.021 2 0.057698757297676456 0.00435247403787416 0.023948926662175782 ['ENSG00000168802|ENST00000448552|CHTF8'] 73477 17858 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep4 989.5467196310099 989.54617496793 77.319 1 0.057695581583047724 0.00435247403787416 0.023950536564644742 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 28361 13955 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62208490379 58.514 3 0.057686728570526424 0.00435247403787416 0.023955025044476663 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 109754 5454 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 26.035 2 0.05765531176297499 0.00435247403787416 0.0239709595276091 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 1901 5442 AEIGEHVAP True H1975_Epitope_Rep2 921.45559574705 921.45448993586 25.959 2 0.05765069045337399 0.00435247403787416 0.023973304248090375 ['ENSG00000084774|ENST00000264705|CAD'] 119672 18214 VAVGEFQEV True PC9_epitope_Rep1 976.48656152216 976.48546993586 74.851 2 0.05764177873024584 0.00435247403787416 0.023977826388641092 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant', 'MACC1|p.D299Ifs*7|1|0.2|ENSG00000183742|chr7:20159466-20159466|C/-|frameshift_variant'] 85913 14202 QHGGFVVTV True PC9_epitope_Rep3 942.4923156089399 942.49120993586 59.714 2 0.057630393143088515 0.00435247403787416 0.023983604984594196 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 25442 15922 FEEDGLGVLP True H1975_Epitope_Rep1 1074.5233409536997 1074.52277496793 66.555 1 0.057625673703618006 0.00435247403787416 0.0239860006401817 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 86074 16310 QHSITPLAL True PC9_epitope_Rep3 978.5498304850599 978.54872993586 67.872 2 0.0576231187179915 0.00435247403787416 0.023987297678223798 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 105259 19712 SRLDSVLLL True PC9_epitope_Rep4 1014.6073453611799 1014.60624993586 83.945 2 0.057608998441174904 0.00435247403787416 0.02399446698065245 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 124950 9463 VHSPPNVGL True PC9_epitope_Rep2 918.49231560894 918.49120993586 41.738 2 0.057598085925819636 0.00435247403787416 0.024000008933044673 ['ENSG00000146247|ENST00000275034|PHIP'] 102659 20450 SLYGGTITI True PC9_epitope_Rep2 923.49639792987 923.4958449679301 84.09 1 0.057597792832579486 0.00435247403787416 0.02400015779728352 ['ENSG00000155827|ENST00000389120|RNF20', 'RNF20|p.Q440Sfs*14|1|0.08|ENSG00000155827|chr9:101551726-101551727|-/T|frameshift_variant'] 21347 18732 ERFNVPVSL True PC9_epitope_Rep2 1059.5712942056298 1059.57077496793 77.431 1 0.0575908204174229 0.00435247403787416 0.02400369938553838 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 24385 14443 FAAGETFL True H1975_Epitope_Rep2 854.41741933318 854.4168749679301 60.71 1 0.05757166309685024 0.00435247403787416 0.024013432647003716 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 140251 9635 YRAPEAEL True PC9_epitope_Rep2 947.4712458111899 947.47014993586 42.403 2 0.05756887845637062 0.00435247403787416 0.024014847737143016 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1', 'nc|ENSG00000152332|Q8TAS1-2|UHMK1', 'ENSG00000152332|ENST00000489294|UHMK1'] 137193 12426 YAYDGKDYLAL True H1975_Epitope_Rep1 1290.6132185872598 1290.6121299358601 52.833 2 0.05756114497235817 0.00435247403787416 0.024018778111826688 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 34993 10893 GQTGARIWL True NCI_RA007_Epitope_Rep4 1000.5454138109599 1000.54430993586 48.755 2 0.05754995453973002 0.00435247403787416 0.02402446643707113 ['ENSG00000183726|ENST00000374358|TMEM50A'] 96795 10250 SAQGSDVSLTA True PC9_epitope_Rep3 1034.48801807414 1034.4869299358602 44.377 2 0.05754333199451876 0.00435247403787416 0.024027833386773067 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 68142 13699 LTDQAIFY True H1975_Epitope_Rep3 969.4807478657299 969.4801949679301 57.987 1 0.057538953542306946 0.00435247403787416 0.024030059658164578 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 41020 12794 HTGPVFTV True PC9_epitope_Rep5 856.44430278736 856.44320993586 54.223 2 0.05752910037823265 0.00435247403787416 0.02403507028948045 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 72923 20385 MPWFKGWKV True PC9_epitope_Rep3 1177.61065691981 1177.60900490379 83.663 3 0.05752503829445013 0.00435247403787416 0.024037136257208276 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 29390 16046 FVDPNGKISL True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 66.978 2 0.057524747729323526 0.00435247403787416 0.024037284044218628 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 47974 13697 IYKDSSTFL True PC9_epitope_Rep2 1072.5440763982801 1072.5429699358601 57.977 2 0.057519618215367184 0.00435247403787416 0.024039893149182645 ['ENSG00000145388|ENST00000388822|METTL14'] 88269 10727 QSEIASM[Oxidation]LY True H1975_Epitope_Rep1 1056.47976227 1056.4786699358601 46.224 2 0.05750840768789498 0.00435247403787416 0.024045596228299163 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 85780 4620 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 23.138 2 0.05748895709010988 0.00435247403787416 0.02405549414787844 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 17413 2618 EHDPVGQM[Oxidation]V True PC9_epitope_Rep2 1026.4440454676198 1026.44294993586 14.726 2 0.05747708512704444 0.00435247403787416 0.024061537304712687 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 54472 13001 KYGPVFSF True NCI_RA007_Epitope_Rep4 943.4803539429099 943.47924993586 57.11 2 0.057469536310775844 0.00435247403787416 0.024065380575697164 ['ENSG00000001630|ENST00000003100|CYP51A1'] 17281 15885 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50708496793 66.251 1 0.05746678158664985 0.00435247403787416 0.024066783205761774 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 47895 9082 IYIKHPHLF True NCI_RA007_Epitope_Rep4 1166.66004964038 1166.6589499358602 41.767 2 0.05746281632218449 0.00435247403787416 0.024068802339820485 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 73508 21362 MVGEGFIEV True PC9_epitope_Rep5 979.4684689298699 979.46736993586 87.228 2 0.05746264449604158 0.00435247403787416 0.024068889838088026 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 32170 5898 GEVPAPSAA True H1975_Epitope_Rep2 797.3919328613299 797.3913849679301 27.672 1 0.0574624379289518 0.00435247403787416 0.024068995027715822 ['ENSG00000119574|ENST00000594051|ZBTB45'] 133116 5711 VVQNGFFAHK True NCI_RA007_Epitope_Rep3 1145.5981776598098 1145.59654490379 29.439 3 0.057458158580187574 0.00435247403787416 0.024071174283152433 ['ENSG00000132965|ENST00000380490|ALOX5AP'] 76533 23540 NQIPGLIWI True PC9_epitope_Rep5 1052.60186605792 1052.6007699358602 95.531 2 0.05743781714504895 0.00435247403787416 0.024081535589225458 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 88581 6222 QTDLHEHPLY True H1975_Epitope_Rep3 1251.58840082175 1251.58675490379 28.945 3 0.05743089604951134 0.00435247403787416 0.024085061904981504 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 34053 23590 GLVPFLVSV True PC9_epitope_Rep1 929.5586042636099 929.55805496793 95.527 1 0.057422967330963144 0.004370473891500444 0.02408910218201147 ['ENSG00000182481|ENST00000330459|KPNA2'] 98867 20524 SGVEVLVSV True PC9_epitope_Rep5 887.4963979298699 887.4958449679301 83.988 1 0.0574124197013211 0.004370473891500444 0.024094477942261838 ['ENSG00000198695|ENST00000361681|MT-ND6'] 45349 14892 IQDEIRSVI True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 62.548 2 0.05740955660454789 0.004370473891500444 0.024095937350671087 ['ENSG00000164109|ENST00000296509|MAD2L1', 'ENST00000504707.1_1_4:120981275-120987923:-|nuORF'] 54168 15383 KVSGVILSV True PC9_epitope_Rep5 900.5644179200399 900.56332993586 64.179 2 0.05740579574294444 0.004370473891500444 0.024097854499058394 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000564968.1_1_16:1507514-1509320:-|nuORF', 'ENST00000563822.1_1_16:1505719-1509320:-|nuORF'] 28540 13879 FSENERLI True PC9_epitope_Rep3 1006.5083595959 1006.50726993586 58.466 2 0.05740083051581438 0.004370473891500444 0.024100385800121492 ['ENST00000502732.5_1_1:179076600-179076849:-|nuORF'] 108485 20850 SYMFVDENTF True PC9_epitope_Rep4 1251.5117902938298 1251.51068993586 88.353 2 0.05739800056286525 0.004370473891500444 0.02410182863399035 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 91952 5153 RKNQGDFSL True NCI_RA007_Epitope_Rep5 1063.5410567065098 1063.53994993586 26.516 2 0.05738769211784351 0.004370473891500444 0.024107084991956417 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF', 'ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 85279 4992 QEQLRPQTP True H1975_Epitope_Rep3 1095.56727145435 1095.5661699358602 24.331 2 0.05737973400842396 0.004370473891500444 0.0241111436052557 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3'] 24817 15365 FAVAPNQNL True PC9_epitope_Rep4 972.50288029264 972.50178993586 67.033 2 0.05737930283006232 0.004370473891500444 0.0241113635226729 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 1452 7634 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 34.316 1 0.05737763732113193 0.004370473891500444 0.02411221301284044 ['ENSG00000173545|ENST00000308683|ZNF622'] 47761 20591 IYEPNFIFF True NCI_RA007_Epitope_Rep3 1188.5855472874398 1188.5844499358602 89.689 2 0.05737392090614612 0.004370473891500444 0.02411410866208735 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 33592 18879 GLFIIDDK True PC9_epitope_Rep5 919.5014833103099 919.50038993586 77.637 2 0.05736202657810325 0.004370473891500444 0.024120176565138648 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 120442 6180 VEEPSVGA True H1975_Epitope_Rep2 786.3759484440199 786.3753949679301 28.742 1 0.057356968389101044 0.004370473891500444 0.02412275742422937 ['ENSG00000278129|ENST00000621650|ZNF8', 'ZNF8|p.G557V|1|0.61|ENSG00000278129|chr19:58295478-58295478|G/T|missense_variant'] 3978 12626 AHDTTLVAL True PC9_epitope_Rep4 939.50254593947 939.50199496793 56.404 1 0.0573558086455156 0.004370473891500444 0.024123349199870723 ['ENSG00000134575|ENST00000672073|ACP2'] 104750 14064 SQVPEVTTV True PC9_epitope_Rep3 958.49712620586 958.49602993586 59.185 2 0.057349760176753375 0.004370473891500444 0.02412643573007997 ['ENSG00000196455|ENST00000356763|PIK3R4'] 85058 6611 QEIRLTEQA True H1975_Epitope_Rep2 1086.56693710118 1086.5658499358601 30.337 2 0.05734649236363152 0.004370473891500444 0.024128103442082965 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 103704 6557 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 30.194 2 0.05733922119763414 0.004370473891500444 0.02413181461969319 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 110954 15430 THADYVLEM True PC9_epitope_Rep2 1077.48009624273 1077.47898993586 64.629 2 0.05733255819491295 0.004370473891500444 0.024135215846780238 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 87334 7703 QPRYPVNSV True PC9_epitope_Rep2 1058.55089311422 1058.5497899358602 35.004 2 0.05732662485145477 0.004370473891500444 0.024138244974042967 ['ENSG00000120438|ENST00000321394|TCP1'] 44567 21223 ILPGSLFRF True PC9_epitope_Rep2 1048.60695143836 1048.60584993586 87.092 2 0.05732405021924478 0.004370473891500444 0.024139559498334604 ['nc|ENSG00000136536|Q9H992-2|MARCHF7', 'ENSG00000136536|ENST00000409175|MARCHF7'] 110191 5861 TEQEVAQVA True H1975_Epitope_Rep2 973.4716397340098 973.47054993586 27.53 2 0.05731739988826131 0.004370473891500444 0.024142955243154608 ['ENSG00000196878|ENST00000356082|LAMB3'] 48992 7895 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 37.06 2 0.05731170264817542 0.004370473891500444 0.024145864671479028 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 4131 11305 AHSPLAAQL True PC9_epitope_Rep5 906.4923156089401 906.49120993586 48.477 2 0.0573088815588374 0.004370473891500444 0.024147305443972547 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 135176 9933 WEQDYHLQP True H1975_Epitope_Rep2 1214.5356369729 1214.53452993586 43.197 2 0.0573030956708408 0.004370473891500444 0.024150260627024557 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G659C|1|0.72|ENSG00000177119|chr12:45409451-45409451|G/T|missense_variant'] 97732 11020 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 47.417 1 0.05730001600569506 0.004370473891500444 0.02415183372123848 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ZNF451|p.H887Qfs*4|1|0.08|ENSG00000112200|chr6:57150770-57150773|ATAT/-|frameshift_variant', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 105335 15844 SRPPLVVF True PC9_epitope_Rep6 913.53853752537 913.53744993586 73.215 2 0.05729166593693601 0.004370473891500444 0.024156099406630886 ['nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 105140 14934 SRFLANEVL True PC9_epitope_Rep6 1047.57129420563 1047.57018993586 69.442 2 0.05729158310980965 0.004370473891500444 0.024156141722808736 ['ENSG00000166483|ENST00000450114|WEE1', 'nc|ENSG00000166483|P30291-2|WEE1'] 136340 9707 WTDILSHGRY True H1975_Epitope_Rep2 1246.6094706195 1246.60783490379 42.322 3 0.05728649828532235 0.004370473891500444 0.02415873967585283 ['ENSG00000171316|ENST00000423902|CHD7'] 44412 16749 ILGGPGTVQGV True PC9_epitope_Rep5 996.56039516876 996.55928993586 69.43 2 0.057274210085835914 0.004370473891500444 0.02416501904234131 ['ENST00000526066.5_1_11:66366934-66367108:+|nuORF', 'ENSG00000173992|ENST00000533244|CCS'] 60850 16377 LHVPGPMAV True PC9_epitope_Rep3 919.49495846123 919.49386993586 68.132 2 0.05727195431985508 0.004370473891500444 0.024166171917018527 ['ENSG00000102243|ENST00000370634|VGLL1'] 1270 16235 AEDLNLLIA True H1975_Epitope_Rep2 970.53351171458 970.5329649679301 67.657 1 0.05726685202649166 0.004370473891500444 0.024168779775859725 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'DDB1|p.N36T|1|0.23|ENSG00000167986|chr11:61331646-61331646|T/G|missense_variant'] 99154 13734 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.4914349679301 57.851 1 0.057250204241738774 0.004370473891500444 0.024177290481110034 ['ENSG00000132646|ENST00000379143|PCNA'] 16587 9288 EENFAVEA True H1975_Epitope_Rep1 907.3923267841499 907.39122993586 40.639 2 0.057221629054612824 0.004370473891500444 0.024191905057072863 ['ENSG00000026025|ENST00000544301|VIM'] 89144 10923 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.57528993586 49.784 2 0.057221233282661654 0.004370473891500444 0.02419210752796423 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 17773 17775 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.51708993586 73.66 2 0.057219482595631435 0.004370473891500444 0.024193003171139784 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 39994 9325 HPNQPLTITA True PC9_epitope_Rep4 1090.57710786206 1090.5760099358602 43.477 2 0.05721212329330407 0.004370473891500444 0.024196768483640906 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 31590 12407 GEEMPGLSV True H1975_Epitope_Rep3 917.4164333570099 917.41532993586 52.913 2 0.05721103903908156 0.004370473891500444 0.02419732327617339 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 64342 18701 LPLFLGRLP True PC9_epitope_Rep6 1024.64333694708 1024.64222993586 84.575 2 0.05720059720771103 0.004370473891500444 0.024202666754821047 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 121524 18131 VFAGVFNTF True NCI_RA007_Epitope_Rep5 1000.50181766348 1000.50127496793 76.545 1 0.05719532010136769 0.004370473891500444 0.02420536765538576 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 35444 5185 GSGTAEVELK True NCI_RA007_Epitope_Rep2 989.50293986229 989.50184993586 24.788 2 0.05718226699212638 0.004370473891500444 0.02421204960079358 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 103221 7680 SPKQILDPA True PC9_epitope_Rep4 967.5338460677499 967.53274993586 36.92 2 0.05716007107150771 0.004370473891500444 0.024223415626666862 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant'] 89538 20512 QYLQDAYSF True PC9_epitope_Rep3 1133.5029398622898 1133.5023749679299 84.161 1 0.05715715890995745 0.004370473891500444 0.024224907236723985 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 108808 4569 SYTSHTNEI True NCI_RA007_Epitope_Rep3 1050.4618033263002 1050.4607099358602 24.854 2 0.05714727336389684 0.004370473891500444 0.024229971236723796 ['ENSG00000112936|ENST00000313164|C7'] 61267 23636 LIPEYLNFI True PC9_epitope_Rep1 1120.61684741572 1120.61574993586 95.71 2 0.05713569075643507 0.004370473891500444 0.02423590579774639 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 137210 17106 YAYDGKDYLAL True PC9_epitope_Rep6 1290.6132185872598 1290.6121299358601 78.373 2 0.057133179859678696 0.004370473891500444 0.024237192475202257 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 21668 5915 ERSEPTQAL True PC9_epitope_Rep5 1029.5090878718897 1029.50798993586 27.745 2 0.05713023963388922 0.004370473891500444 0.024238699235519738 ['ENST00000587807.5_1_18:54270260-54293401:-|nuORF', 'ENSG00000091164|ENST00000217515|TXNL1'] 43659 19346 IHDGFGFM[Oxidation]L True PC9_epitope_Rep4 1051.4797027003501 1051.47860993586 82.524 2 0.05713011559685456 0.004370473891500444 0.0242387628019176 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 121519 17398 VFAGVFNTF True NCI_RA007_Epitope_Rep3 1000.50181766348 1000.50072993586 76.336 2 0.05709096881339475 0.004370473891500444 0.02425883225433661 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 73553 9396 MVRPVAVAA True PC9_epitope_Rep5 912.5215075622399 912.52040993586 41.096 2 0.0570864050726185 0.004370473891500444 0.02426117293431876 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 76520 19396 NQINGSFAL True PC9_epitope_Rep1 962.48214484806 962.48159496793 79.418 1 0.05708243562787306 0.004370473891500444 0.02426320897425336 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 89546 15733 QYLRVETQF True PC9_epitope_Rep2 1182.6033226099 1182.6022299358601 65.788 2 0.05707299703534557 0.004370473891500444 0.024268050915135744 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant'] 57747 5622 LEENPDPSA True H1975_Epitope_Rep3 970.4243551884199 970.4238049679301 26.661 1 0.05704952946313791 0.004370473891500444 0.024280093428505102 ['ENSG00000068654|ENST00000263857|POLR1A', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF', 'ENST00000424089.5_1_2:86315699-86317049:-|nuORF'] 73400 19305 MTLEGDIRL True PC9_epitope_Rep5 1046.5430308524599 1046.54192993586 79.302 2 0.0570385970823052 0.004370473891500444 0.024285705286181628 ['ENSG00000072786|ENST00000176763|STK10', 'ENST00000519710.1_1_5:171533786-171583726:-|nuORF'] 103350 8889 SPNMANTVNA True PC9_epitope_Rep3 1017.45494412405 1017.45384993586 39.141 2 0.057028238417434 0.004370473891500444 0.024291023724583864 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 48245 9683 IYQKAFEHL True PC9_epitope_Rep4 1147.6025943339098 1147.60093490379 44.875 3 0.05702483342089305 0.004370473891500444 0.024292772178560944 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 40459 6865 HRDERVLSL True PC9_epitope_Rep4 1123.60980497267 1123.60816490379 33.625 3 0.056981886018194525 0.004370473891500444 0.024314835302244292 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 90195 3972 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 20.348 2 0.05697855868505921 0.004370473891500444 0.02431654539074122 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 26516 18476 FIFSDTHEL True PC9_epitope_Rep4 1107.52367530687 1107.52256993586 79.139 2 0.05695808988643033 0.004370473891500444 0.024327067758912524 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 52567 7945 KLHDVELHQV True PC9_epitope_Rep5 1216.65642081192 1216.65478490379 35.499 3 0.05695643504683013 0.004370473891500444 0.024327918640114313 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000560075.1_1_15:52439654-52476873:-|nuORF'] 78236 15790 NYGHVYAVF True PC9_epitope_Rep4 1068.5028802926397 1068.5017899358602 68.662 2 0.05692982278151047 0.004370473891500444 0.02434160576621784 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 92889 13049 RPFQSLIHA True PC9_epitope_Rep3 1067.58761297611 1067.58650993586 55.221 2 0.05692307368184457 0.004370473891500444 0.024345078046760327 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 26920 19016 FLDGNEMTL True PC9_epitope_Rep6 1038.46919720586 1038.46867496793 85.789 1 0.05691559569336389 0.004370473891500444 0.024348925849833853 ['ENSG00000169504|ENST00000374379|CLIC4'] 127653 10271 VPAGGAVAV True PC9_epitope_Rep3 739.42283906679 739.42229496793 44.456 1 0.05690795397527152 0.004370473891500444 0.0243528584685588 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 39141 7179 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.5406899358602 33.005 2 0.05690777916545807 0.004370473891500444 0.024352948436772402 ['ENSG00000156482|ENST00000287038|RPL30'] 70618 26091 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 107.99 3 0.05690613408020783 0.004370473891500444 0.02435379511667918 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 21601 12991 ERQSQALIL True PC9_epitope_Rep5 1056.5927579262 1056.5916699358602 54.979 2 0.056885854619346 0.004370473891500444 0.02436423458280033 ['ENSG00000095319|ENST00000372577|NUP188'] 105520 5315 SSAGPGLLK True NCI_RA007_Epitope_Rep5 828.4705175352 828.46942993586 27.137 2 0.05687712822279001 0.004370473891500444 0.024368728005371324 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 2271 7857 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 35.169 1 0.056866742060663354 0.004392981386963256 0.024374077056742372 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 92766 13868 RPADVIFAT True PC9_epitope_Rep2 988.5341804209199 988.53308993586 58.626 2 0.05686044496358759 0.004392981386963256 0.02437732068685795 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 88002 13450 QRNPQGFVL True PC9_epitope_Rep5 1057.5668775315298 1057.56578993586 56.751 2 0.056849369784345495 0.004392981386963256 0.024383026451094903 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 39045 9195 HHSGNTYFL True PC9_epitope_Rep2 1074.48829285766 1074.4871899358602 40.71 2 0.05683812216704199 0.004392981386963256 0.024388822289417262 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 142621 14214 YYNGKWEFL True NCI_RA007_Epitope_Rep4 1218.5709598524597 1218.5698699358602 61.954 2 0.05683507239885256 0.004392981386963256 0.02439039403378675 ['ENSG00000144843|ENST00000357003|ADPRH'] 55102 6771 LAAARLAAA True PC9_epitope_Rep4 826.5024863698198 826.50138993586 33.242 2 0.05683381816652603 0.004392981386963256 0.024391040448063787 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 127690 10311 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.4914349679301 44.648 1 0.05683031119627411 0.004392981386963256 0.02439284797507714 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 77297 11268 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46637496793 48.387 1 0.05682652285338025 0.004392981386963256 0.02439480066048004 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 93423 15635 RQFGFIVL True NCI_RA007_Epitope_Rep4 978.5650866263799 978.56398993586 67.917 2 0.056820776647632854 0.004392981386963256 0.024397762787987817 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 65411 13554 LREPLPATL True PC9_epitope_Rep6 1008.59678067748 1008.59568993586 63.867 2 0.05681101786033337 0.004392981386963256 0.02440279411783893 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant', 'NSUN2|p.E154Ifs*5|1|0.06|ENSG00000037474|chr5:6625568-6625569|TC/-|frameshift_variant'] 53152 11606 KPYTVVDVSA True PC9_epitope_Rep2 1077.57062549929 1077.5695299358601 49.968 2 0.05679636516640462 0.004392981386963256 0.024410350357846028 ['PEAK1-TSPAN3|1|fusion', 'PEAK1-TSPAN3|2|fusion', 'PEAK1|p.K1454Rfs*15|1|0.13|ENSG00000173517|chr15:77115025-77115038|GGCTCCTCTGCTTC/-|frameshift_variant', 'ENSG00000173517|ENST00000682557|PEAK1'] 71664 17208 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50884993586 71.481 2 0.05679600894230905 0.004392981386963256 0.02441053408521414 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 71527 21069 MAAAWPLLL True H1975_Epitope_Rep2 984.5466596809199 984.5461149679301 87.209 1 0.056795482633475905 0.004392981386963256 0.024410805538362664 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 106812 14569 SVALVIHNV True PC9_epitope_Rep1 950.5549158655001 950.55380993586 60.864 2 0.05678841795024969 0.004392981386963256 0.024414449538835137 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2'] 55292 8334 LADVNNIGKY True H1975_Epitope_Rep1 1105.57677350889 1105.57566993586 36.988 2 0.05678492508195784 0.004392981386963256 0.02441625136031359 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 125314 6556 VIPELNGK True H1975_Epitope_Rep3 868.50181766348 868.50072993586 30.178 2 0.05677814101833219 0.004392981386963256 0.024419751312534058 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 48861 8379 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54861496793 37.182 1 0.056776813790697704 0.004392981386963256 0.02442043609287358 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 34891 18881 GQLSDLVVV True PC9_epitope_Rep3 928.52294703088 928.52184993586 77.85 2 0.05677461384965925 0.004392981386963256 0.024421571186139777 ['ENST00000511288.1_1_17:48545715-48548505:+|nuORF', 'ENST00000506085.5_1_17:48545715-48551043:+|nuORF'] 45428 7074 IQHPSNVL True PC9_epitope_Rep4 906.49231560894 906.49120993586 34.477 2 0.05676595474846263 0.004392981386963256 0.02442603944565328 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 9688 21310 AYGGAFYAF True PC9_epitope_Rep2 965.42831837005 965.4277649679301 87.433 1 0.056725609296947 0.004392981386963256 0.024446868211049803 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 76883 11497 NRDLATPVM True PC9_epitope_Rep3 1015.51206507735 1015.51096993586 49.225 2 0.056721154420099874 0.004392981386963256 0.024449169072906344 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 52859 15635 KPEEQWWNA True PC9_epitope_Rep5 1186.5407223533398 1186.5396299358601 65.15 2 0.056717891711830365 0.004392981386963256 0.024450854325904315 ['ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 138918 7019 YKKFYEAFSK True NCI_RA007_Epitope_Rep5 1309.6706738937298 1309.66903490379 33.678 3 0.05671757421883462 0.004392981386963256 0.02445101832289116 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 129257 22081 VQVEDIVFL True PC9_epitope_Rep4 1060.580461907 1060.57987496793 93.15 1 0.056707226230129325 0.004392981386963256 0.02445636399012176 ['ENSG00000197780|ENST00000338366|TAF13'] 139834 7340 YPNSGSVSA True PC9_epitope_Rep1 880.39266113732 880.3921149679301 33.045 1 0.056700038220555804 0.004392981386963256 0.024460077865956893 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 49185 4337 KEMELPAKEA True H1975_Epitope_Rep3 1144.5798102839997 1144.5781649037901 21.799 3 0.05668511520094811 0.004392981386963256 0.02446778986881114 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 30178 20638 FYQGIVQQF True PC9_epitope_Rep2 1128.5603951687597 1128.55928993586 84.818 2 0.05666825262282692 0.004416804162964843 0.024476506854188083 ['ENSG00000126216|ENST00000261965|TUBGCP3', 'ENST00000469302.1_1_13:113140309-113144032:-|nuORF'] 40576 6444 HRGTGLVL True PC9_epitope_Rep2 851.49773534255 851.49662993586 30.201 2 0.0566682378094076 0.004416804162964843 0.024476514513110576 ['ENSG00000099812|ENST00000215582|MISP'] 125422 12512 VITEKGISDL True PC9_epitope_Rep4 1073.5968402471299 1073.59574993586 55.946 2 0.05666670796864002 0.004416804162964843 0.024477305492187827 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 72830 9168 MPNGDHIVSA True PC9_epitope_Rep1 1039.47567956863 1039.4745899358602 40.114 2 0.05665237499902827 0.004416804162964843 0.024484717242022287 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 39538 9401 HLGALLAR True PC9_epitope_Rep3 849.51847078713 849.51736993586 41.097 2 0.05664602152030162 0.004416804162964843 0.024488003351016314 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 115023 8018 TRATEGMVVA True PC9_epitope_Rep3 1033.5226297610498 1033.5215299358601 35.817 2 0.05664385451177085 0.004416804162964843 0.024489124249673415 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 133612 10507 VYADQPHIF True NCI_RA007_Epitope_Rep5 1088.52909504048 1088.5279899358602 47.048 2 0.05664372100772753 0.004416804162964843 0.02448919330698856 ['ENSG00000100439|ENST00000428304|ABHD4'] 103192 19167 SPILVATAV True PC9_epitope_Rep2 869.52221875489 869.52112993586 79.099 2 0.05661203919193614 0.004416804162964843 0.02450558626432291 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 4313 21044 AIIPVSGITVV True PC9_epitope_Rep4 1067.65904658087 1067.6579499358602 89.104 2 0.05661127508881445 0.004416804162964843 0.024505981752757807 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 77657 22454 NTIDILTAI True PC9_epitope_Rep2 972.54916177872 972.54861496793 91.859 1 0.05659509393385409 0.004416804162964843 0.024514358233851386 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 107158 21574 SVIEQIVYV True PC9_epitope_Rep3 1048.580461907 1048.57936993586 88.279 2 0.05657645352381155 0.004416804162964843 0.024524011004155483 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 103783 15816 SPVVPQISA True PC9_epitope_Rep2 896.4967322830399 896.49562993586 66.097 2 0.05656478302098587 0.004416804162964843 0.024530056219509246 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 39051 8244 HHSGNTYFL True PC9_epitope_Rep6 1074.48829285766 1074.4871899358602 41.296 2 0.05656228944857652 0.004416804162964843 0.02453134804225676 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 103040 6756 SPFSTGRSC True PC9_epitope_Rep5 940.40726565564 940.40616993586 30.958 2 0.05656198886340556 0.004416804162964843 0.02453150376788145 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 116511 18285 TTSDIDYAL True PC9_epitope_Rep1 997.46040634397 997.45985496793 75.123 1 0.056538099927785704 0.004439483497805627 0.024543882884051148 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 7546 13183 ASEDSVLLY True H1975_Epitope_Rep3 995.4811417885501 995.48004993586 55.959 2 0.05653119158840342 0.004439483497805627 0.024547463800587532 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 100517 22951 SLASLLVSV True PC9_epitope_Rep5 887.5327834385901 887.53168993586 93.269 2 0.05652806378724062 0.004439483497805627 0.024549085242081273 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 62058 16856 LLDTELDLY True H1975_Epitope_Rep3 1093.55430672881 1093.5532099358602 70.388 2 0.05652375902684399 0.004439483497805627 0.02455131697359601 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 6356 6124 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 28.603 2 0.05652089696403854 0.004439483497805627 0.0245528008640356 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 26638 19574 FIPPDGNFRL True PC9_epitope_Rep2 1174.61349337078 1174.6123899358602 80.673 2 0.05651765249172945 0.004439483497805627 0.024554483119962073 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 138120 22055 YGIENEVFL True PC9_epitope_Rep1 1082.52842633414 1082.52732993586 89.647 2 0.056517032732077775 0.004439483497805627 0.02455480447662956 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 7372 14415 ARSDKPIFTL True PC9_epitope_Rep5 1146.6397081186199 1146.63805490379 60.446 3 0.05650895027400314 0.004439483497805627 0.02455899572652983 ['ENSG00000136045|ENST00000412830|PWP1'] 27840 16775 FQDGDTIVNV True PC9_epitope_Rep6 1106.52440358286 1106.5233099358602 77.022 2 0.056505756399840984 0.004439483497805627 0.02456065212433618 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 31564 10100 GEEEPPALP True H1975_Epitope_Rep3 937.4392769765698 937.43872496793 43.89 1 0.056504590197203004 0.004439483497805627 0.024561256962158575 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 75034 12897 NHSGAVVLL True PC9_epitope_Rep1 908.50796567308 908.50686993586 54.481 2 0.05650446699349487 0.004439483497805627 0.02456132086115634 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'ITGA6|p.G477Efs*22|1|0.1|ENSG00000091409|chr2:172476437-172476437|G/-|frameshift_variant', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 140845 14667 YSDPSVVFV True H1975_Epitope_Rep2 1011.49131254943 1011.4907749679301 61.578 1 0.0564988789995691 0.004439483497805627 0.024564219204756734 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF', 'ABCA1|p.L710Q|1|0.28|ENSG00000165029|chr9:104827156-104827156|A/T|missense_variant'] 24819 14442 FAVAPNQNL True PC9_epitope_Rep6 972.50288029264 972.50178993586 67.443 2 0.05649550158232115 0.004439483497805627 0.024565971131045188 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 109653 16060 TEAPPIIFATP True H1975_Epitope_Rep1 1155.6175756917098 1155.61646993586 67.112 2 0.056492060617560104 0.004439483497805627 0.024567756136732264 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 46712 11998 ITDVMDAY True H1975_Epitope_Rep2 926.4055343201399 926.4049849679301 51.232 1 0.056488267953912624 0.004439483497805627 0.024569723722605085 ['ENSG00000139645|ENST00000267116|ANKRD52'] 133539 18827 VWSDVTPLTF True NCI_RA007_Epitope_Rep1 1163.58627556343 1163.5857749679299 77.377 1 0.05648790764599423 0.004439483497805627 0.024569910653200588 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 124964 12916 VHTIVNETL True PC9_epitope_Rep1 1024.55530978832 1024.5542099358602 54.554 2 0.05647920522538197 0.004439483497805627 0.024574425928376338 ['ENSG00000023516|ENST00000025301|AKAP11'] 116808 20422 TVEEQVINI True PC9_epitope_Rep3 1043.54989005471 1043.5487899358602 83.806 2 0.05647901523247991 0.004439483497805627 0.024574524515090346 ['ENST00000476275.5_1_1:78046613-78098535:-|nuORF', 'nc|ENSG00000036549|Q8IYH5-4|ZZZ3'] 32761 9304 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.4608649679301 41.128 1 0.05647502346497363 0.004439483497805627 0.024576595913261605 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 135985 14669 WQLQDDKNQSL True PC9_epitope_Rep5 1373.6575430107298 1373.65644993586 61.427 2 0.0564620283155725 0.004439483497805627 0.024583340417668458 ['ENSG00000119655|ENST00000555619|NPC2'] 74981 11789 NHQGATPLVL True PC9_epitope_Rep2 1048.56654317836 1048.5654499358602 50.679 2 0.056450441908021995 0.004439483497805627 0.024589355193684957 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 124912 12998 VHQLSVTL True PC9_epitope_Rep2 895.51271670035 895.51160993586 55.283 2 0.056447027628337344 0.004439483497805627 0.024591127880150186 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'DNAJA4|p.N132Mfs*2|1|0.34|ENSG00000140403|chr15:78273172-78273172|A/-|frameshift_variant', 'DNAJA4|p.L281Ifs*14|1|0.1|ENSG00000140403|chr15:78275689-78275690|-/C|frameshift_variant', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000485075.1_1_15:78562865-78566840:+|nuORF', 'ENST00000399417.3_1_X:106595227-106595875:-|nuORF', 'nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1'] 85851 18970 QHFDAAYIF True PC9_epitope_Rep4 1110.5134449763398 1110.5123499358601 81.058 2 0.05644132796598885 0.004439483497805627 0.024594087389656086 ['ENSG00000023608|ENST00000216294|SNAPC1'] 96858 4763 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 25.767 2 0.05643847838399161 0.004439483497805627 0.02459556713575438 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 94920 10302 RTFEKIEEV True PC9_epitope_Rep3 1149.60298825673 1149.60133490379 44.573 3 0.05641818906916539 0.004459873805843448 0.024606105405974295 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 26856 14721 FLDDSTALY True H1975_Epitope_Rep1 1043.48114178855 1043.48057496793 61.845 1 0.05641463024413759 0.004459873805843448 0.0246079542804227 ['ENSG00000100558|ENST00000216446|PLEK2'] 100191 23531 SIVDFLITA True PC9_epitope_Rep2 977.5433481222899 977.54279496793 95.987 1 0.056410643817134454 0.004459873805843448 0.024610025451010764 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 79252 6423 PAPPPPPPP True NCI_RA007_Epitope_Rep5 865.46978925921 865.46868993586 31.376 2 0.056400399908089774 0.004459873805843448 0.024615348454395277 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 38105 5077 HAYDREVHL True H1975_Epitope_Rep2 1138.55195574338 1138.5503249037902 24.61 3 0.056387936332284574 0.004459873805843448 0.0246218262581955 ['ENST00000483602.1_1_2:241534571-241535939:+|nuORF', 'ENST00000416591.5_1_2:241535566-241537362:+|nuORF', 'nc|ENSG00000142330|Q9HC96-4|CAPN10', 'nc|ENSG00000142330|Q9HC96-2|CAPN10', 'ENSG00000142330|ENST00000391984|CAPN10'] 93477 6085 RQIKPYTL True NCI_RA007_Epitope_Rep4 1017.5971150306499 1017.59600993586 30.021 2 0.05638489566312436 0.004459873805843448 0.0246234068457112 ['ENSG00000277791|ENST00000619426|PSMB3'] 100932 17582 SLFGGSVKL True PC9_epitope_Rep4 906.51746772762 906.51636993586 75.645 2 0.05637835392975441 0.004459873805843448 0.024626807652233802 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000477798.5_1_3:33840175-33866683:+|nuORF'] 98283 5752 SEVLKTVSA True H1975_Epitope_Rep2 932.5178616504401 932.51676993586 27.122 2 0.05637583192949508 0.004459873805843448 0.024628118860777395 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 35532 12191 GSSGGVIYL True H1975_Epitope_Rep2 851.43888305375 851.43833496793 51.974 1 0.05637346832257342 0.004459873805843448 0.024629347776614345 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 53113 12443 KPSVNSFISA True PC9_epitope_Rep2 1048.55530978832 1048.5542099358602 53.167 2 0.05637184809069567 0.004459873805843448 0.02463019021969593 ['nc|ENSG00000177683|Q7Z6K1-2|THAP5', 'ENSG00000177683|ENST00000415914|THAP5'] 31457 5210 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 25.111 2 0.056368066244335484 0.004459873805843448 0.024632156700272207 ['ENSG00000131116|ENST00000300811|ZNF428'] 1116 4956 AEAPASPAP True H1975_Epitope_Rep3 809.3919328613299 809.3913849679301 24.191 1 0.0563666348889183 0.004459873805843448 0.024632901012008317 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 73475 17433 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep3 989.5467196310099 989.54562993586 76.489 2 0.056358158473310174 0.004459873805843448 0.024637309205780868 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 116308 10203 TTDVDSLSY True H1975_Epitope_Rep2 999.43967089939 999.4390749679301 44.251 1 0.056354881694923996 0.004459873805843448 0.024639013498555004 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'nc|ENSG00000183597|Q6ICL3-6|TANGO2'] 96429 18396 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41156993586 75.967 2 0.05633942603432672 0.004459873805843448 0.02464705361465178 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 45052 18840 IPHLLGDVV True PC9_epitope_Rep4 961.55966689277 961.55856993586 80.555 2 0.05631707027493688 0.004459873805843448 0.024658687394239563 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 38451 7465 HENVSVIP True H1975_Epitope_Rep2 893.4606811274899 893.45958993586 33.661 2 0.0563040746707692 0.004459873805843448 0.024665452495955798 ['ENST00000551440.1_1_12:100594629-100598862:+|nuORF', 'ENST00000550813.5_1_12:100594629-100599999:+|nuORF', 'nc|ENSG00000075089|Q9GZN1-2|ACTR6', 'ENSG00000075089|ENST00000188312|ACTR6'] 140350 5979 YRDPTTVTT True PC9_epitope_Rep2 1052.51383889916 1052.51274993586 28.384 2 0.05625607468901572 0.004459873805843448 0.024690454315010647 ['nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'PPP2R2A|p.R158Kfs*8|1|0.11|ENSG00000221914|chr8:26360985-26360986|-/A|frameshift_variant'] 140867 5185 YSDVHNCSY True H1975_Epitope_Rep3 1086.40765957846 1086.40656993586 25.04 2 0.0562483318131596 0.004459873805843448 0.024694489502357878 ['ENST00000557983.1_1_15:80423514-80429967:+|nuORF', 'nc|ENSG00000086666|Q6FIF0-2|ZFAND6', 'ENSG00000086666|ENST00000261749|ZFAND6'] 7565 9078 ASEPSAQLSY True H1975_Epitope_Rep3 1051.4822044177101 1051.4816749679298 39.905 1 0.05624611843211019 0.004459873805843448 0.024695643111873018 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF'] 27832 12466 FQDEVAKAQQL True PC9_epitope_Rep3 1275.64591569787 1275.6448099358602 52.974 2 0.05624237914082384 0.004459873805843448 0.02469759213320928 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 114573 16767 TQDGNIYQL True PC9_epitope_Rep2 1050.4981888350198 1050.49708993586 69.742 2 0.05623954380872944 0.004459873805843448 0.024699070078843578 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 121806 16271 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.828 2 0.05623744392886655 0.004459873805843448 0.02470016471405269 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 104695 21618 SQVAVAGLLTV True PC9_epitope_Rep1 1056.6179100448799 1056.61737496793 87.979 1 0.056234370896332916 0.004459873805843448 0.02470176671786746 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 104833 16272 SRAGLQFPV True PC9_epitope_Rep5 973.53451477409 973.53340993586 67.584 2 0.05622894903149513 0.004459873805843448 0.024704593421361165 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AK|p.S19F|1|0.18|ENSG00000278677|chr6:27838284-27838284|G/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 30011 22549 FYAHIIPFL True PC9_epitope_Rep5 1119.6117024656298 1119.61060993586 91.74 2 0.05622890050845543 0.004459873805843448 0.024704618720295217 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 2676 7580 AESPGVPVA True H1975_Epitope_Rep3 825.4232329896099 825.42212993586 34.137 2 0.05622856781767145 0.004459873805843448 0.024704792179189153 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 26552 12426 FIIPNVVK True NCI_RA007_Epitope_Rep1 928.57458868092 928.57348993586 52.31 2 0.05622600302325639 0.004459873805843448 0.024706129453066585 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 117180 11088 TVLERVEGA True PC9_epitope_Rep1 972.5240096600398 972.52290993586 47.538 2 0.056200027159962314 0.004459873805843448 0.02471967685412573 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 39426 5012 HKVISGTTL True NCI_RA007_Epitope_Rep4 954.5498304850599 954.54872993586 25.763 2 0.05618652112995021 0.004459873805843448 0.02472672341482801 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'nc|ENSG00000040341|Q9NUL3-4|STAU2'] 45676 15238 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6744449037901 63.882 3 0.05616962037229321 0.004459873805843448 0.024735543678454597 ['ENSG00000136628|ENST00000366923|EPRS1'] 39858 6753 HPADSVVSV True PC9_epitope_Rep6 909.4555957470501 909.45448993586 34.783 2 0.05615980178104542 0.004459873805843448 0.024740669166210743 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 99527 13957 SIDSLQLGY True H1975_Epitope_Rep1 994.49712620586 994.49602993586 58.841 2 0.056144144281903244 0.004459873805843448 0.024748844658131545 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 72333 24246 MIPLLLAAL True PC9_epitope_Rep2 953.5983609006099 953.59726993586 98.802 2 0.056138563520520955 0.004459873805843448 0.024751759217302122 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 141268 6327 YTDKIM[Oxidation]TY True H1975_Epitope_Rep2 1049.47394861357 1049.47284993586 29.269 2 0.05612852072368424 0.004459873805843448 0.024757004860898803 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 8831 9924 AVEFNFGQK True NCI_RA007_Epitope_Rep2 1038.5134449763398 1038.5123499358601 43.228 2 0.05612821352136917 0.004459873805843448 0.024757165337394943 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000468690.2_2_1:245021279-245021477:-|nuORF'] 98119 12580 SESGLITIA True H1975_Epitope_Rep2 889.4756624852901 889.47511496793 53.484 1 0.056125282032479136 0.004459873805843448 0.02475869673727618 ['ENSG00000115159|ENST00000438166|GPD2', 'nc|ENSG00000115159|P43304-2|GPD2'] 30668 7341 GALALEEK True PC9_epitope_Rep3 829.4545331178899 829.45342993586 33.246 2 0.056125164861638925 0.004459873805843448 0.02475875794870556 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 100166 13892 SITSELHAV True PC9_epitope_Rep5 955.4974605590301 955.49636993586 58.455 2 0.05612187433926821 0.004459873805843448 0.0247604770122538 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 128745 5032 VPYGVGKAA True PC9_epitope_Rep6 860.4756029156398 860.4745099358599 26.981 2 0.056117270491000154 0.004459873805843448 0.024762882376024628 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 71932 9829 MEQQTLSIA True H1975_Epitope_Rep2 1019.4957463068699 1019.49464993586 42.793 2 0.05611092375906578 0.004459873805843448 0.024766198687010615 ['ENSG00000104738|ENST00000649973|MCM4'] 109031 13832 TAIHNFPTV True PC9_epitope_Rep1 998.5185303567799 998.51742993586 58.047 2 0.05609386267635651 0.004459873805843448 0.024775115477826935 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 14046 13230 DRMVGQVL True PC9_epitope_Rep1 916.4800366730798 916.47892993586 55.755 2 0.056090425811909664 0.004459873805843448 0.024776912068902233 ['ENSG00000130741|ENST00000253039|EIF2S3'] 103023 20988 SPFQFTVGP True PC9_epitope_Rep2 978.4810822188999 978.47998993586 86.181 2 0.056090353639991174 0.004459873805843448 0.024776949797408312 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 21114 18983 ERADPLFL True PC9_epitope_Rep3 959.5076313199099 959.50652993586 78.241 2 0.056080087261364285 0.004484304932735426 0.024782317166100735 ['ENSG00000198060|ENST00000358935|MARCHF5'] 87466 10183 QQDKQQLVL True PC9_epitope_Rep5 1098.6033226099 1098.6022299358601 44.156 2 0.0560769475550113 0.004484304932735426 0.024783958846717188 ['ENSG00000139618|ENST00000380152|BRCA2'] 84848 10570 QEALSALTA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 45.611 1 0.05607527197638407 0.004484304932735426 0.024784835008651324 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 127666 10310 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 44.542 2 0.056074019688368726 0.004484304932735426 0.02478548984972385 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 103848 8115 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 36.189 2 0.056062459218511905 0.004484304932735426 0.02479153573919 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 35234 14339 GRAPQVLVL True PC9_epitope_Rep4 951.5865503469499 951.58544993586 63.057 2 0.05605906226574953 0.004484304932735426 0.0247933125293026 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 35339 8312 GRSDTQLVV True PC9_epitope_Rep2 973.5192586327698 973.51816993586 37.337 2 0.05605110222065634 0.004484304932735426 0.024797476514256622 ['ENSG00000089154|ENST00000300648|GCN1'] 39530 6617 HLGALLAR True NCI_RA007_Epitope_Rep4 849.51847078713 849.51736993586 32.08 2 0.056028948525990774 0.004484304932735426 0.024809068675557048 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 142874 11850 YYTPITPHL True NCI_RA007_Epitope_Rep4 1103.56514619603 1103.56404993586 52.561 2 0.05599161081223002 0.004508726158210694 0.024828617117868695 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 6699 17992 AQAGALLQV True PC9_epitope_Rep5 869.49706663621 869.49651496793 74.223 1 0.055990260990722844 0.004508726158210694 0.02482932408764632 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 106782 8563 SVADTVARV True PC9_epitope_Rep6 916.4977949121999 916.49668993586 42.709 2 0.05597837732929315 0.004508726158210694 0.02483554894679458 ['ENSG00000145632|ENST00000274289|PLK2'] 61911 19346 LLDELPMIY True H1975_Epitope_Rep2 1105.57293399841 1105.57182993586 80.293 2 0.05597772289244861 0.004508726158210694 0.024835891792627306 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 71438 18310 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.56467496793 75.444 1 0.05597652831407791 0.004508726158210694 0.02483651761837956 ['ENSG00000084652|ENST00000373610|TXLNA'] 99979 8975 SIPGGPVRL True H1975_Epitope_Rep1 894.52870111766 894.52760993586 39.427 2 0.055970295950775746 0.004508726158210694 0.024839782912243882 ['CON__P12763'] 6562 11678 APVAEVPTA True PC9_epitope_Rep1 853.4545331178899 853.45342993586 49.797 2 0.055967393377230445 0.004508726158210694 0.02484130377679169 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 52667 20587 KLVEFDFLGA True PC9_epitope_Rep4 1137.60701100801 1137.6059099358602 87.34 2 0.055964514966804005 0.004508726158210694 0.024842812063624372 ['ENSG00000013810|ENST00000313288|TACC3', 'TACC3|p.A598S|1|0.3|ENSG00000013810|chr4:1737284-1737284|G/T|missense_variant', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 104191 18993 SQFPGAITL True PC9_epitope_Rep6 932.4967322830399 932.49618496793 85.701 1 0.0559529169952174 0.004533941236068896 0.024848890237947886 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 41504 17014 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 70.463 2 0.05593984582604244 0.004559039562332202 0.024855742084072808 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 6160 9753 APM[Oxidation]PPIIHA True PC9_epitope_Rep6 961.50552352537 961.50442993586 47.944 2 0.05593157544980996 0.004559039562332202 0.02486007825822463 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 8054 5869 ATDPTIHTV True PC9_epitope_Rep6 953.4818104948899 953.48070993586 30.817 2 0.055902934139324456 0.00457417235279252 0.0248751002328518 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 133117 6322 VVQNGFFAHK True NCI_RA007_Epitope_Rep4 1145.5981776598098 1145.59654490379 30.921 3 0.05587320227985343 0.00457417235279252 0.024890702857084196 ['ENSG00000132965|ENST00000380490|ALOX5AP'] 109538 18015 TDRQLFDTI True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 74.087 2 0.05586403744458001 0.00457417235279252 0.024895514142306507 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 106407 3027 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 16.946 3 0.05586085376134461 0.00457417235279252 0.0248971856845546 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 48276 10743 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 46.641 3 0.05585467160303537 0.00457417235279252 0.024900431817940858 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 78146 14811 NYAFLHRTL True PC9_epitope_Rep3 1133.59817765981 1133.59654490379 62.105 3 0.05583681100084918 0.00457417235279252 0.024909812226676452 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 115020 8294 TRATEGMVV True PC9_epitope_Rep5 962.4855159763398 962.48440993586 36.841 2 0.05582382892332957 0.00457417235279252 0.02491663243121731 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 21154 11639 ERATNIEVL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 50.096 2 0.0558231825317608 0.00457417235279252 0.024916972060584665 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 75123 12065 NHYGGVVSL True PC9_epitope_Rep2 944.4715801643599 944.47048993586 51.721 2 0.0558222097563495 0.00457417235279252 0.024917483187595957 ['nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 47569 15882 IVVDNVPQV True PC9_epitope_Rep6 981.5494961318899 981.54838993586 73.369 2 0.0558196155520874 0.00457417235279252 0.024918846310971767 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 132370 10795 VVADETPAV True PC9_epitope_Rep2 899.4600124211499 899.45890993586 46.841 2 0.0558103168093898 0.00457417235279252 0.02492373288410153 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 107467 17245 SVLVSVSEV True PC9_epitope_Rep6 917.50696261357 917.50641496793 78.93 1 0.055806890571527504 0.00457417235279252 0.02492553362113031 ['ENSG00000221926|ENST00000649191|TRIM16'] 6647 17444 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 75.093 2 0.05580651303997981 0.00457417235279252 0.02492573204858452 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 120295 6557 VEDPATEEP True H1975_Epitope_Rep3 985.42402083525 985.42347496793 30.182 1 0.05580522803421502 0.00457417235279252 0.024926407447660295 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32', 'nc|ENSG00000008517|P24001-7|IL32'] 134116 10867 VYLAAVNRL True NCI_RA007_Epitope_Rep4 1017.5971150306499 1017.59600993586 48.65 2 0.05578260958574522 0.00457417235279252 0.02493829841066057 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1', 'PLXND1|p.V182Afs*15|1|0.13|ENSG00000004399|chr3:129606095-129606096|-/AGGAG|frameshift_variant'] 72332 24244 MIPLLLAAL True PC9_epitope_Rep2 953.5983609006099 953.59781496793 98.794 1 0.05578091339951212 0.00457417235279252 0.024939190335526638 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 54736 7153 KYMEDYHQF True NCI_RA007_Epitope_Rep3 1259.52810906431 1259.5270099358602 35.253 2 0.05577319780827889 0.00457417235279252 0.024943247875983725 ['ENSG00000118898|ENST00000345988|PPL'] 34056 23478 GLVPFLVSV True PC9_epitope_Rep3 929.5586042636099 929.55750993586 95.587 2 0.0557685250280615 0.00457417235279252 0.0249457055270167 ['ENSG00000182481|ENST00000330459|KPNA2'] 39249 16324 HIIGGVIAV True PC9_epitope_Rep4 877.53853752537 877.53744993586 70.754 2 0.05575704794097967 0.00457417235279252 0.02495174283459399 ['ENST00000550528.5_1_12:58133675-58140075:+|nuORF', 'ENST00000546993.5_1_12:58138937-58140584:+|nuORF', 'ENSG00000135452|ENST00000257910|TSPAN31'] 138259 9380 YGYHDFGSS True PC9_epitope_Rep4 1031.3984747937498 1031.39736993586 43.69 2 0.055750486292241164 0.00457417235279252 0.024955195060213674 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 98162 8369 SESRFFVSS True H1975_Epitope_Rep2 1044.48762415132 1044.48652993586 37.144 2 0.055749648476326984 0.00457417235279252 0.02495563588437089 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 85810 12155 QHDPYITSI True PC9_epitope_Rep4 1072.5189242796 1072.5178299358602 54.572 2 0.055748728871065495 0.00457417235279252 0.024956119750800913 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 36525 4857 GVGPVPARA True PC9_epitope_Rep6 822.47118624154 822.47008993586 26.204 2 0.05574173260569565 0.00457417235279252 0.024959801235845496 ['ENSG00000129636|ENST00000320640|ITFG1'] 21515 6921 ERMAGNEAL True PC9_epitope_Rep5 989.4600295044899 989.4589299358599 31.592 2 0.055741412982198896 0.00457417235279252 0.024959969435734773 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 84310 13286 PYSGSPANF True PC9_epitope_Rep5 938.4133965819 938.41228993586 56.114 2 0.05574128040717064 0.00457417235279252 0.02496003920282408 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF'] 54702 20635 KYLVIGDLLF True PC9_epitope_Rep6 1179.69034670915 1179.68924993586 92.108 2 0.05573270389029827 0.00457417235279252 0.02496455293536929 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 115161 8717 TRDPAQRVVL True PC9_epitope_Rep3 1153.6567551650899 1153.65511490379 38.483 3 0.055725456978262075 0.00457417235279252 0.024968367485001784 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 40144 8665 HQAVAVIL True NCI_RA007_Epitope_Rep3 849.50723739709 849.50614993586 41.164 2 0.05571271106941368 0.00457417235279252 0.024975077812626083 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12', 'nc|ENSG00000196628|P15884-16|TCF4', 'ENSG00000196628|ENST00000354452|TCF4', 'nc|ENSG00000196628|P15884|TCF4', 'nc|ENSG00000196628|P15884-4|TCF4', 'nc|ENSG00000196628|P15884-5|TCF4', 'nc|ENSG00000196628|P15884-11|TCF4', 'nc|ENSG00000196628|P15884-12|TCF4', 'nc|ENSG00000196628|P15884-13|TCF4', 'nc|ENSG00000196628|P15884-14|TCF4', 'nc|ENSG00000196628|P15884-10|TCF4', 'nc|ENSG00000196628|P15884-7|TCF4', 'nc|ENSG00000196628|P15884-15|TCF4', 'nc|ENSG00000196628|P15884-9|TCF4', 'nc|ENSG00000196628|P15884-2|TCF4', 'nc|ENSG00000196628|P15884-6|TCF4', 'nc|ENSG00000196628|P15884-8|TCF4'] 53893 9928 KTLTGKTITL True PC9_epitope_Rep3 1074.6648602373 1074.66376993586 43.145 2 0.05570817422992278 0.00457417235279252 0.024977466711477853 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.R302Kfs*14|1|0.05|ENSG00000150991|chr12:124912867-124912868|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 75688 21412 NLIDLDDLYV True PC9_epitope_Rep6 1191.6023195503901 1191.60177496793 95.235 1 0.055702806157835856 0.00457417235279252 0.02498029356706987 ['ENSG00000125676|ENST00000245838|THOC2'] 127999 9803 VPIESIERA True PC9_epitope_Rep4 1012.5553097883198 1012.55420993586 45.348 2 0.05569976775700831 0.00457417235279252 0.024981893733271445 ['ENSG00000167136|ENST00000372642|ENDOG'] 57343 5300 LEAERSTNIAA True H1975_Epitope_Rep2 1173.5989655054502 1173.5978699358602 25.442 2 0.055699762203185996 0.00457417235279252 0.02498189665826282 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'ENST00000609021.1_1_6:125597294-125597426:-|nuORF'] 65350 11094 LRDLEDSLAR True PC9_epitope_Rep1 1186.6305999868998 1186.6289549037901 47.56 3 0.05569886441626685 0.00457417235279252 0.02498236949326086 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 8072 7345 ATDRFRSLY True H1975_Epitope_Rep3 1127.5723568347898 1127.57071490379 33.229 3 0.055692762844322896 0.00457417235279252 0.024985583205634005 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-10|DST'] 6685 10666 AQAEVYKEL True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 45.917 2 0.05568751795966205 0.00457417235279252 0.024988345997080302 ['ENSG00000169710|ENST00000306749|FASN'] 54453 17441 KYGFGYQL True PC9_epitope_Rep1 974.48616759934 974.48506993586 71.884 2 0.055679561517797786 0.00457417235279252 0.02499253765286227 ['ENSG00000145632|ENST00000274289|PLK2', 'nc|ENSG00000185988|Q496M5-2|PLK5', 'ENSG00000185988|ENST00000454744|PLK5'] 4364 23275 AILPTSIFL True PC9_epitope_Rep2 973.58481901145 973.58427496793 95.011 1 0.05566085364519608 0.00457417235279252 0.025002395936584227 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5'] 103858 7043 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 34.347 2 0.05565339516355418 0.00457417235279252 0.025006327230007386 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 21885 8582 ESDGKSRWFY True H1975_Epitope_Rep3 1273.5727507576098 1273.57111490379 38.002 3 0.055650131991604825 0.00457417235279252 0.025008047391799435 ['ENSG00000146476|ENST00000367294|ARMT1'] 115243 4023 TREEGAQTL True PC9_epitope_Rep3 1003.4934378077497 1003.49234993586 20.587 2 0.05563768791044657 0.00457417235279252 0.02501460819599221 ['ENSG00000169871|ENST00000306085|TRIM56'] 48174 20863 IYPPLLGALSF True NCI_RA007_Epitope_Rep3 1189.6746966450098 1189.67358993586 90.841 2 0.055635286235530726 0.00457417235279252 0.025015874592791826 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 82433 11914 PPPLPPPPP True PC9_epitope_Rep5 907.51673945163 907.51564993586 50.825 2 0.05562685922223916 0.00457417235279252 0.025020318592313715 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'ENSG00000135723|ENST00000258201|FHOD1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000090470|ENST00000204549|PDCD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 15584 8130 EAQSELIQA True H1975_Epitope_Rep3 987.4872897981498 987.48618993586 36.248 2 0.05562471800716554 0.00457417235279252 0.025021447879190563 ['TLN2|p.N1245I|1|0.21|ENSG00000171914|chr15:62739394-62739394|A/T|missense_variant'] 71755 5324 MEERAQLEA True H1975_Epitope_Rep3 1075.4968089360298 1075.49570993586 25.551 2 0.055623841261157686 0.00457417235279252 0.025021910292425325 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2'] 32419 17827 GFSLEELR True PC9_epitope_Rep5 949.4868958753299 949.48578993586 73.591 2 0.05561847852908337 0.00457417235279252 0.025024738871588105 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 28099 18210 FQVRDIENL True PC9_epitope_Rep4 1132.58767254576 1132.58656993586 78.113 2 0.05561599244140507 0.00457417235279252 0.0250260502592909 ['ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-5|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2'] 24456 8258 FADQEVRSL True H1975_Epitope_Rep1 1063.52982331647 1063.5287299358602 36.703 2 0.05561588951165703 0.00457417235279252 0.025026104555095345 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 142525 15769 YYITGNLETF True NCI_RA007_Epitope_Rep4 1219.57610480255 1219.5750099358602 68.482 2 0.05561397871509093 0.00457417235279252 0.025027112526320238 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 10001 18776 AYPYNFSNL True PC9_epitope_Rep6 1087.49746055903 1087.49636993586 84.862 2 0.05561159305264897 0.00457417235279252 0.02502837104720324 ['ENSG00000174282|ENST00000380599|ZBTB4'] 62507 21736 LLIPGLATA True PC9_epitope_Rep5 867.54295419947 867.54184993586 88.639 2 0.05560514483687799 0.00457417235279252 0.025031772993794738 ['ENSG00000125356|ENST00000371437|NDUFA1'] 17372 13965 EHDGSLFQAV True PC9_epitope_Rep6 1101.50908787189 1101.50798993586 65.571 2 0.05558677946069559 0.00457417235279252 0.025041464477552643 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 38414 3391 HENGVHTIDVK True NCI_RA007_Epitope_Rep2 1247.62584895963 1247.62420490379 17.849 3 0.05557423487822417 0.00457417235279252 0.0250480862514158 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000475487.1_1_3:58141790-58149086:+|nuORF'] 138146 18386 YGLDYVHNL True PC9_epitope_Rep2 1092.52400966004 1092.52290993586 76.052 2 0.05556249956866907 0.00457417235279252 0.02505428227384063 ['ENSG00000212907|ENST00000361335|MT-ND4L'] 35187 10718 GRADGYVL True PC9_epitope_Rep1 849.43446637965 849.43336993586 46.116 2 0.05555040637650062 0.00457417235279252 0.025060668698786915 ['ENSG00000142937|ENST00000396651|RPS8'] 38959 12348 HHITVKINEL True PC9_epitope_Rep5 1202.6771562565 1202.67550490379 52.49 3 0.055549942670409386 0.00457417235279252 0.02506091361161039 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 105428 10996 SRTATITVL True PC9_epitope_Rep4 960.5603951687599 960.55928993586 50.073 2 0.0555431274610082 0.00457417235279252 0.02506451340847162 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 48857 8173 KEAIETIVA True H1975_Epitope_Rep1 972.5491617787198 972.54861496793 36.378 1 0.055538543844592704 0.00457417235279252 0.02506693473933012 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 73220 19772 MSDLLSPLLY True H1975_Epitope_Rep2 1150.59439771898 1150.5933099358601 82.027 2 0.05553054481944166 0.00457417235279252 0.02507116079197653 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 74758 14058 NHASLISAL True PC9_epitope_Rep4 924.50288029264 924.5023349679301 61.984 1 0.055528147225172235 0.00457417235279252 0.025072427616529773 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 137735 8150 YENEVALR True PC9_epitope_Rep5 992.4927095317598 992.49160993586 36.288 2 0.05551355085361784 0.00457417235279252 0.025080141194563792 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 106677 16097 STTNGGILTV True PC9_epitope_Rep2 961.50802524273 961.50692993586 67.175 2 0.05550925112388831 0.00457417235279252 0.025082413832038006 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 128545 4889 VPSYPSKSA True PC9_epitope_Rep5 934.47599683846 934.47488993586 23.846 2 0.05550366702187254 0.00457417235279252 0.025085365606479663 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 32122 13222 GETIFVTAP True NCI_RA007_Epitope_Rep5 933.48074786573 933.47964993586 57.539 2 0.05549770728750895 0.00457417235279252 0.02508851628723249 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 35466 5856 GSIDAITGK True NCI_RA007_Epitope_Rep5 860.46034677432 860.45924993586 29.21 2 0.05547474003012182 0.00457417235279252 0.02510066152699242 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 5234 21077 ALPEIFTEL True PC9_epitope_Rep6 1031.55391280599 1031.55337496793 93.896 1 0.05547044934535852 0.00457417235279252 0.02510293105798433 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 47846 9631 IYHNPTANSF True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 42.388 2 0.0554693046071661 0.00457417235279252 0.025103536591416585 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 130883 10716 VTDDALVY True H1975_Epitope_Rep1 894.4334633201399 894.4329149679301 46.181 1 0.05546643057420449 0.00457417235279252 0.025105056929912658 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 26196 20605 FHDHALMIIF True PC9_epitope_Rep2 1242.6219498795 1242.6208499358602 84.691 2 0.05546359102397161 0.00457417235279252 0.02510655910894477 ['ENSG00000198712|ENST00000361739|MT-CO2'] 102552 18882 SLVSSLYKV True PC9_epitope_Rep5 994.5698972232999 994.56880993586 77.649 2 0.05546083413695483 0.00457417235279252 0.025108017635081147 ['ENSG00000122591|ENST00000432176|HYCC1', 'ENST00000467005.5_1_7:23023511-23030730:-|nuORF', 'nc|ENSG00000122591|Q9BYI3-3|HYCC1'] 39228 18666 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58057496793 76.589 1 0.05545891835111798 0.00457417235279252 0.02510903122317324 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 26206 11109 FHDLEGNAV True PC9_epitope_Rep1 1000.4614094034799 1000.46030993586 47.616 2 0.05544454918489185 0.00457417235279252 0.025116634719685754 ['ENSG00000099219|ENST00000339450|ERMP1'] 7667 8948 ASITALEAK True PC9_epitope_Rep3 902.50729696674 902.50618993586 39.367 2 0.05544315917109984 0.00457417235279252 0.025117370360738894 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 107334 19759 SVLGAITSV True PC9_epitope_Rep4 845.48583324617 845.48472993586 84.127 2 0.05543250077391092 0.00457417235279252 0.02512301178151126 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 107143 18877 SVIDNDNYL True PC9_epitope_Rep5 1051.48220441771 1051.48110993586 77.63 2 0.055428879069668 0.00457417235279252 0.025124928986415374 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 31472 5417 GEAPPSAPP True H1975_Epitope_Rep3 821.3919328613299 821.39082993586 25.898 2 0.055419653401745664 0.00457417235279252 0.025129813332269067 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 60510 7449 LHAQGDPAL True PC9_epitope_Rep3 920.4715801643599 920.47048993586 33.657 2 0.055407399090708784 0.00457417235279252 0.025136302457666865 ['ENSG00000257365|ENST00000246166|FNTB', 'nc|ENSG00000257365|P49356-2|FNTB'] 118312 15519 TYLTSIPSL True NCI_RA007_Epitope_Rep3 993.53826274185 993.53716993586 68.602 2 0.05539507960146575 0.00457417235279252 0.025142827621417427 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L'] 87745 10903 QRASLEAAI True PC9_epitope_Rep5 957.5243440132099 957.52324993586 46.926 2 0.055379942290034255 0.00457417235279252 0.02515084737084665 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.G326V|1|0.47|ENSG00000170421|chr12:52899779-52899779|C/A|missense_variant', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931', 'ENST00000449849.2_1_2:203790299-203790389:+|nuORF'] 142122 21336 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58920993586 90.237 2 0.05536933615278649 0.00457417235279252 0.0251564678786851 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 104554 12917 SQPPVQVSV True PC9_epitope_Rep4 939.5025459394699 939.50144993586 57.57 2 0.05536199573304441 0.00457417235279252 0.025160358449145416 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 1723 5402 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 25.811 1 0.05535611580042377 0.00457417235279252 0.025163475323574887 ['ENSG00000161847|ENST00000617231|RAVER1'] 62103 7605 LLEDKHFQSY True H1975_Epitope_Rep2 1278.6244519773 1278.62334993586 34.205 2 0.05534661890735715 0.00457417235279252 0.025168510236568954 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 105451 11917 SRVDGVVL True PC9_epitope_Rep1 843.48141657207 843.48030993586 50.705 2 0.055326722674187916 0.00457417235279252 0.025179061454553668 ['ENSG00000134247|ENST00000393203|PTGFRN', 'ENST00000496699.1_1_1:117509714-117517097:+|nuORF'] 125052 8617 VIDPVAPRY True H1975_Epitope_Rep3 1028.5654805492 1028.5643899358602 38.139 2 0.05532301807516537 0.00457417235279252 0.02518102648977268 ['ENSG00000136628|ENST00000366923|EPRS1'] 108052 18695 SYAELGTTI True PC9_epitope_Rep1 953.47057710485 953.47002496793 76.701 1 0.05531304477761772 0.00457417235279252 0.02518631732642111 ['ENSG00000151012|ENST00000280612|SLC7A11'] 73463 15672 MVAPAVASV True PC9_epitope_Rep5 843.4524249429099 843.45132993586 65.294 2 0.05530866192668445 0.00457417235279252 0.02518864274704395 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 76603 10358 NQMPTQPQV True PC9_epitope_Rep4 1041.49132963277 1041.49022993586 47.54 2 0.05530267151688008 0.00457417235279252 0.025191821407647974 ['ENSG00000100393|ENST00000263253|EP300'] 142863 22043 YYTEFPTVL True PC9_epitope_Rep3 1131.54882742555 1131.5477299358602 90.085 2 0.05527203257229154 0.00457417235279252 0.025208084853891408 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 88384 17935 QSLEYLEQV True PC9_epitope_Rep6 1107.54480467427 1107.54370993586 81.614 2 0.05525108585725729 0.004594915297028453 0.025219209021996168 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 101932 12640 SLPYQVSL True H1975_Epitope_Rep1 905.4858332461699 905.48528496793 53.672 1 0.055244447625868554 0.004594915297028453 0.02522273531025147 ['nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 48849 7833 KEAEELLPA True H1975_Epitope_Rep2 998.5284263341398 998.5273299358599 35.079 2 0.05523866468651077 0.004594915297028453 0.025225807622175238 ['ENSG00000135476|ENST00000257934|ESPL1'] 33478 14164 GLATDVQTV True PC9_epitope_Rep5 902.47091145802 902.4703649679301 59.493 1 0.05522275350728722 0.004594915297028453 0.02523426252332086 ['ENSG00000277791|ENST00000619426|PSMB3'] 109604 6189 TEADVNPKAYP True H1975_Epitope_Rep3 1203.5771674317098 1203.57606993586 28.818 2 0.05521566316742917 0.004594915297028453 0.025238031019719817 ['ENSG00000100138|ENST00000401959|SNU13'] 8086 10331 ATDVNDALGY True H1975_Epitope_Rep1 1037.4665543535698 1037.46544993586 44.686 2 0.05519016633713408 0.004594915297028453 0.025251586711039924 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 29658 22249 FVLDEADEML True PC9_epitope_Rep3 1180.53219138524 1180.53108993586 90.866 2 0.055174603463888666 0.004594915297028453 0.025259864123854663 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 34834 18885 GQISEVVVV True PC9_epitope_Rep1 928.5229470308799 928.52184993586 77.426 2 0.055171309309699774 0.004594915297028453 0.02526161649676982 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 7715 4857 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 23.78 2 0.05517032714493164 0.004594915297028453 0.025262138994727346 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 1952 6446 AEINGTMNA True H1975_Epitope_Rep3 919.4069313024701 919.4063849679301 29.768 1 0.055142042017078126 0.004594915297028453 0.025277190471112192 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 1096 11276 AEALPSLAA True H1975_Epitope_Rep1 841.4545331178899 841.4539849679301 48.35 1 0.055135390489722394 0.004594915297028453 0.025280731148937866 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 73373 10107 MTEPIDEY True H1975_Epitope_Rep1 996.4110136233999 996.41046496793 43.815 1 0.055123296007282455 0.004594915297028453 0.025287170314957065 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 134038 15142 VYISNGQVL True PC9_epitope_Rep6 991.5338460677498 991.53274993586 70.309 2 0.05511039597893616 0.004594915297028453 0.025294039987974436 ['ENST00000487571.1_1_3:53922418-53925815:-|nuORF', 'ENSG00000113811|ENST00000495461|SELENOK'] 104094 20981 SQDYPTLAF True PC9_epitope_Rep2 1040.48147614172 1040.48097496793 86.154 1 0.05509787625615716 0.004594915297028453 0.025300708745536846 ['ENSG00000134697|ENST00000373062|GNL2'] 21417 16335 ERIPDVAAL True PC9_epitope_Rep2 982.5447451046199 982.54364993586 68.079 2 0.05509360900402888 0.004594915297028453 0.025302982103033254 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 39344 11552 HKDAYQVIL True PC9_epitope_Rep2 1085.5869442697701 1085.58584993586 49.761 2 0.05508944751598022 0.004594915297028453 0.025305199292653062 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'ENST00000530300.1_1_11:43333659-43340360:+|nuORF'] 2707 6470 AETAAVTVA True NCI_RA007_Epitope_Rep4 831.43379767331 831.43324496793 31.484 1 0.05507296408123276 0.004594915297028453 0.025313983185280442 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 45374 19847 IQDRVLYVL True PC9_epitope_Rep5 1117.64954452633 1117.64844993586 81.39 2 0.055072083651672946 0.004594915297028453 0.025314452436605343 ['ENSG00000004779|ENST00000007516|NDUFAB1'] 4103 12657 AHSDAQALVL True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 53.689 2 0.05507139715277043 0.004594915297028453 0.02531481833221597 ['ENSG00000196305|ENST00000443024|IARS1'] 140278 14934 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54290993586 65.385 2 0.05506788621024826 0.004594915297028453 0.025316689696674673 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 108895 8781 TAAPSPLRL True H1975_Epitope_Rep1 924.53926580136 924.53816993586 38.704 2 0.05504993371875711 0.004594915297028453 0.02532626048859949 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 14353 4319 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 23.035 2 0.0550349542995142 0.004594915297028453 0.025334248779643347 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 72879 7124 MPRQLSAAAA True PC9_epitope_Rep4 1014.5280494946599 1014.52694993586 34.675 2 0.05503234084160963 0.004594915297028453 0.02533564272879937 ['ENSG00000078081|ENST00000265598|LAMP3'] 4601 5794 AKSKIRALL True NCI_RA007_Epitope_Rep4 998.6600496403798 998.65894993586 28.91 2 0.05502912549390977 0.004594915297028453 0.025337357804897206 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 5024 23458 ALIGILTGL True PC9_epitope_Rep5 869.55860426361 869.55750993586 95.215 2 0.05502172584157693 0.004594915297028453 0.02534130519931035 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7'] 5704 22230 APALLLIPA True PC9_epitope_Rep1 877.56368964405 877.56258993586 90.33 2 0.05499446323482416 0.004594915297028453 0.0253558534060144 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 90298 4216 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6032899358602 21.334 2 0.05497613634825677 0.004594915297028453 0.025365637456224017 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 32132 6019 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40194496793 28.13 1 0.05497086695523723 0.004594915297028453 0.02536845122118802 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 44952 12201 IPAAIATA True PC9_epitope_Rep5 726.4275900940601 726.4270449679301 51.916 1 0.05496543176871988 0.004594915297028453 0.025371353811845233 ['ENSG00000144224|ENST00000272638|UBXN4'] 90428 5251 REILKTYAA True H1975_Epitope_Rep2 1063.6025943339098 1063.6014899358602 25.264 2 0.05496237787366671 0.004594915297028453 0.02537298483615147 ['ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 125320 6559 VIPELNGK True NCI_RA007_Epitope_Rep5 868.50181766348 868.50072993586 31.891 2 0.05495428978467241 0.004594915297028453 0.02537730497954355 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 6065 8170 APLLQPRAA True PC9_epitope_Rep2 935.5552502186699 935.55414993586 36.781 2 0.05492825303298454 0.004594915297028453 0.025391216662331188 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 8946 14255 AVFVRGVGV True PC9_epitope_Rep5 902.5337864980997 902.53268993586 59.836 2 0.054915935169781646 0.004594915297028453 0.025397800608617176 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 75084 5543 NHVNSGCQL True PC9_epitope_Rep3 970.42906372938 970.42796993586 26.401 2 0.05491497496467921 0.004594915297028453 0.025398313906674404 ['ENSG00000177606|ENST00000371222|JUN'] 114801 17864 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 76.753 2 0.05491220655896889 0.004594915297028453 0.025399793869171038 ['ENSG00000119616|ENST00000341162|FCF1'] 59682 18338 LGAPALEGV True PC9_epitope_Rep1 825.45961849833 825.4590749679301 75.325 1 0.054906041675434364 0.004594915297028453 0.02540308983467009 ['KIF1A-C2orf54|2|fusion', 'KIF1A-C2orf54|1|fusion', 'nc|ENSG00000172478|Q08AI8-3|MAB21L4', 'nc|ENSG00000172478|Q08AI8-2|MAB21L4', 'ENSG00000172478|ENST00000388934|MAB21L4'] 106486 20914 STLDGVLEV True PC9_epitope_Rep1 931.48622716899 931.4856749679301 85.266 1 0.054905565446404896 0.004594915297028453 0.025403344459649937 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6'] 110968 18984 THALPIPVI True PC9_epitope_Rep4 959.5804023373499 959.57930993586 81.114 2 0.05489087468455335 0.004594915297028453 0.025411200287363593 ['ENSG00000136628|ENST00000366923|EPRS1'] 91759 9835 RKFLETVEL True NCI_RA007_Epitope_Rep3 1133.6444591458899 1133.64280490379 45.759 3 0.054869192121936056 0.004594915297028453 0.025422798954724667 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 73917 14257 NAYTGVVYL True H1975_Epitope_Rep2 998.5072969667399 998.50618993586 59.99 2 0.05486112067929912 0.004617830376744303 0.025427117835541593 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 47265 12537 IVDEAIYY True H1975_Epitope_Rep2 984.4804135125601 984.47930993586 53.317 2 0.05485846138547987 0.004617830376744303 0.025428540919695142 ['ENSG00000111229|ENST00000228825|ARPC3'] 40199 11911 HQGATPLVL True PC9_epitope_Rep2 934.5236157372199 934.52250993586 51.14 2 0.05485764644193261 0.004617830376744303 0.025428977039787456 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 75731 23710 NLLDLLTEV True PC9_epitope_Rep4 1028.57537652656 1028.57426993586 99.558 2 0.05483558751212367 0.004617830376744303 0.02544078452019368 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 67473 4415 LSSSSFSR True NCI_RA007_Epitope_Rep5 869.42429561877 869.42318993586 23.614 2 0.05483098372455153 0.004617830376744303 0.025443249412178532 ['LAMP1|p.N181S|1|0.39|ENSG00000185896|chr13:113310847-113310847|A/G|missense_variant'] 133481 13921 VWDTAGQEKF True PC9_epitope_Rep3 1179.5560380643099 1179.5549499358601 58.627 2 0.054826697422259554 0.004617830376744303 0.02544554451438209 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000537745.5_1_12:131357552-131357684:+|nuORF'] 104863 6513 SRAPSVATV True PC9_epitope_Rep5 886.4872302285 886.48612993586 30.025 2 0.05482479850709595 0.004617830376744303 0.025446561348879144 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 137142 8660 YAVEGRDL True PC9_epitope_Rep6 921.4555957470499 921.45448993586 43.146 2 0.05481512497347698 0.004617830376744303 0.025451741918550673 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 134921 12212 VYWDSAGAAHF True NCI_RA007_Epitope_Rep4 1222.5407223533396 1222.5396299358601 53.968 2 0.054800320562460446 0.004617830376744303 0.02545967212187779 ['ENSG00000136213|ENST00000618655|CHST12'] 74781 15371 NHDSRLWSL True PC9_epitope_Rep3 1126.55195574338 1126.55084993586 64.28 2 0.05479472915840526 0.004617830376744303 0.025462667820109083 ['ENSG00000118898|ENST00000345988|PPL'] 23723 20143 EYFKSFNF True PC9_epitope_Rep3 1080.4916469026 1080.4905499358601 82.734 2 0.05478866019588217 0.004617830376744303 0.025465919738680214 ['ENSG00000151470|ENST00000425929|C4orf33'] 55271 19228 LADPSAFVAA True PC9_epitope_Rep5 960.4916469025999 960.49054993586 79.0 2 0.054786983949652174 0.004617830376744303 0.02546681798390435 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 121830 14466 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 67.531 2 0.0547840177067065 0.004617830376744303 0.025468407565916288 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 99981 9289 SIPGGPVRL True H1975_Epitope_Rep2 894.52870111766 894.52760993586 40.688 2 0.05477923146258796 0.004617830376744303 0.025470972658189314 ['CON__P12763'] 90122 5268 RECTIEATA True NCI_RA007_Epitope_Rep1 992.4596951513198 992.45858993586 24.573 2 0.054762029846916534 0.004617830376744303 0.025480193443997937 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 55107 8483 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 37.571 2 0.054758045553134446 0.004617830376744303 0.02548232962124634 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 142765 18646 YYQSSVQYL True PC9_epitope_Rep3 1149.5342399905699 1149.5331499358601 76.941 2 0.05475275566828529 0.004617830376744303 0.025485166039934438 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 111339 4227 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 22.633 2 0.054751230825064556 0.004617830376744303 0.02548598370863413 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 14029 15624 DRIKDEFQL True PC9_epitope_Rep3 1162.59823722946 1162.5965849037902 65.245 3 0.05474540988281456 0.004617830376744303 0.025489105297604352 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 79246 6280 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 30.759 2 0.054740808209341255 0.004617830376744303 0.02549157327478845 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 72788 21636 MPALGWAVA True PC9_epitope_Rep5 914.4684093602199 914.46730993586 88.265 2 0.05472630316958221 0.004636746213743921 0.02549935405120028 ['AOC1|p.P703Qfs*12|1|0.24|ENSG00000002726|chr7:150861059-150861059|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 108630 8660 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59143490379 38.676 3 0.05468187730659224 0.004636746213743921 0.025523198237995634 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 88579 6245 QTDLHEHPLY True H1975_Epitope_Rep2 1251.58840082175 1251.58675490379 28.977 3 0.05467765442234034 0.004636746213743921 0.025525465783850333 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 74734 8645 NHANGLTL True PC9_epitope_Rep3 838.4297153523801 838.42860993586 38.203 2 0.05467577427272046 0.004636746213743921 0.025526475418935705 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 135127 6808 WEEPSSGNGTA True H1975_Epitope_Rep2 1133.46253160229 1133.46142993586 31.105 2 0.054669376233242827 0.004636746213743921 0.02552991141782156 ['ENSG00000179051|ENST00000375436|RCC2'] 9594 20926 AYAENIALL True PC9_epitope_Rep5 976.5229470308799 976.52184993586 85.549 2 0.05466723843731677 0.004636746213743921 0.025531059591217074 ['ENSG00000196455|ENST00000356763|PIK3R4'] 106485 12124 STLDGSLHAV True PC9_epitope_Rep5 998.5032742154599 998.50216993586 51.624 2 0.05466564059883652 0.004636746213743921 0.02553191779314737 ['ENSG00000178607|ENST00000433197|ERN1', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 21776 13854 ERVPINDVL True PC9_epitope_Rep6 1053.58185888933 1053.5807699358602 65.109 2 0.05466542069855773 0.004636746213743921 0.025532035904018636 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 89424 21153 QYDPTPLTW True PC9_epitope_Rep5 1119.52367530687 1119.52256993586 86.418 2 0.054652544394091285 0.004636746213743921 0.025538952768025164 ['ADAMTS12|p.L695Wfs*10|1|0.13|ENSG00000151388|chr5:33624291-33624291|G/-|frameshift_variant', 'ADAMTS12|p.G1085Efs*13|1|0.4|ENSG00000151388|chr5:33576772-33576772|C/-|frameshift_variant', 'nc|ENSG00000151388|P58397-3|ADAMTS12', 'ADAMTS12|p.A1476Pfs*77|1|0.08|ENSG00000151388|chr5:33546079-33546079|C/-|frameshift_variant', 'ENSG00000151388|ENST00000504830|ADAMTS12'] 107861 14701 SVVGSNQLIEA True PC9_epitope_Rep6 1115.58225281215 1115.5811499358601 68.483 2 0.05465078326520158 0.004636746213743921 0.025539898938492296 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 24367 18711 FAADIISVL True H1975_Epitope_Rep1 947.53278343859 947.5322349679301 78.028 1 0.054647437834097104 0.004636746213743921 0.025541696365883746 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 71876 9226 MEMPSQPAP True H1975_Epitope_Rep3 986.4201388384598 986.41904993586 40.482 2 0.05463674409963625 0.004636746213743921 0.02554744264139475 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.E805Ffs*3|1|0.08|ENSG00000048028|chr11:113805034-113805035|-/AGGTGAA|frameshift_variant'] 134230 10834 VYMELSQKL True NCI_RA007_Epitope_Rep4 1109.57908200801 1109.5779899358602 48.525 2 0.05463364076436878 0.004636746213743921 0.025549110435869417 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant', 'FRMD6|p.P105Lfs*3|1|0.27|ENSG00000139926|chr14:51702527-51702527|G/-|frameshift_variant'] 21108 20640 ERADLIAYL True PC9_epitope_Rep5 1062.57095985246 1062.5698699358602 84.445 2 0.05461729794891755 0.004636746213743921 0.025557895010655068 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 48425 22775 IYVPVSLGF True PC9_epitope_Rep3 993.55351888317 993.55242993586 92.873 2 0.05460742769103864 0.004636746213743921 0.025563201780402372 ['ENSG00000172818|ENST00000335987|OVOL1'] 118278 15732 TYLPQSYLI True NCI_RA007_Epitope_Rep3 1096.580461907 1096.57936993586 69.52 2 0.054584392027314604 0.004636746213743921 0.025575590827143366 ['nc|ENSG00000136156|Q9Y287-2|ITM2B', 'ENSG00000136156|ENST00000647800|ITM2B'] 5707 22277 APALLLIPAA True PC9_epitope_Rep1 948.60080342876 948.59970993586 90.504 2 0.05457782812739875 0.004636746213743921 0.02557912201570976 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 93726 8971 RQYSVTDAL True NCI_RA007_Epitope_Rep4 1051.52982331647 1051.5287299358602 41.343 2 0.054569162642213065 0.004636746213743921 0.025583784469157524 ['ENSG00000062725|ENST00000083182|APPBP2'] 3979 13887 AHDTTLVAL True PC9_epitope_Rep5 939.50254593947 939.50144993586 58.436 2 0.05456902553325701 0.004636746213743921 0.02558385824661219 ['ENSG00000134575|ENST00000672073|ACP2'] 96466 8046 SAAM[Oxidation]PGASL True PC9_epitope_Rep2 819.37965430591 819.37854993586 36.308 2 0.054564256915065557 0.004636746213743921 0.025586424328906978 ['ENSG00000086062|ENST00000379731|B4GALT1'] 63676 23235 LMSLIINTF True PC9_epitope_Rep5 1050.57835373202 1050.5772499358602 94.357 2 0.05455965538832531 0.004636746213743921 0.025588900716006554 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 84872 5537 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 26.306 1 0.0545452241302681 0.004636746213743921 0.025596668534793848 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 33723 20028 GLIDGVVEA True PC9_epitope_Rep3 871.46509780159 871.46454496793 82.287 1 0.05454517116554503 0.004636746213743921 0.025596697047680653 ['ENSG00000104824|ENST00000221419|HNRNPL'] 21685 5577 ERSGVNSEL True PC9_epitope_Rep5 989.47778774361 989.47668993586 26.457 2 0.05453071999137045 0.004636746213743921 0.025604477723001933 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 54463 12564 KYGNLSNFL True NCI_RA007_Epitope_Rep4 1054.54474510462 1054.54364993586 55.344 2 0.05453046767339555 0.004636746213743921 0.025604613592771188 ['nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4'] 60511 6165 LHAQGDPAL True PC9_epitope_Rep4 920.4715801643599 920.47048993586 30.743 2 0.0545142954245141 0.004636746213743921 0.025613323482057346 ['ENSG00000257365|ENST00000246166|FNTB', 'nc|ENSG00000257365|P49356-2|FNTB'] 30482 10974 GAGAPVYL True H1975_Epitope_Rep2 746.3962899657799 746.39574496793 47.24 1 0.05451254487441249 0.004636746213743921 0.02561426643602589 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 35530 4318 GSSEPITVK True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 22.953 2 0.05451143949714058 0.004636746213743921 0.0256148618763285 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 67818 19500 LTAEDLFEA True PC9_epitope_Rep6 1007.4811417885498 1007.48057496793 87.668 1 0.05450916549570066 0.004636746213743921 0.025616086865735285 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 121813 17216 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 71.376 2 0.05448577751407575 0.004636746213743921 0.02562868887825216 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 141221 4992 YTAPPLQSK True NCI_RA007_Epitope_Rep3 1003.53384606775 1003.53274993586 26.635 2 0.05447817326465566 0.004636746213743921 0.025632787435398038 ['ENSG00000155008|ENST00000373173|APOOL'] 29326 16499 FVDEPLIHATT True PC9_epitope_Rep3 1241.6292030045697 1241.62810993586 68.6 2 0.054476714379215356 0.004636746213743921 0.025633573816574787 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 44416 6260 ILGPGLNK True H1975_Epitope_Rep3 810.4963383602201 810.49524993586 29.09 2 0.05444833982656575 0.004636746213743921 0.02564887283796955 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 97284 9231 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39630993586 40.498 2 0.05443283969766974 0.004636746213743921 0.025657233686958755 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 108055 18576 SYAELGTTI True PC9_epitope_Rep5 953.47057710485 953.46948993586 76.477 2 0.05443060112693137 0.004636746213743921 0.025658441386331634 ['ENSG00000151012|ENST00000280612|SLC7A11'] 116243 19749 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.5429699358601 81.938 2 0.05442758078433996 0.004636746213743921 0.02566007092943188 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 29673 18583 FVLGHFILL True H1975_Epitope_Rep1 1057.63243791021 1057.63134993586 77.484 2 0.05441222129603964 0.004636746213743921 0.02566835916290488 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 31621 4491 GEFEKKYVA True NCI_RA007_Epitope_Rep5 1069.5444107514497 1069.5433099358602 23.928 2 0.05440326353756221 0.004636746213743921 0.0256731940303479 ['ENSG00000132341|ENST00000543796|RAN'] 16286 13533 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.37484993586 57.191 2 0.05439150365413611 0.004636746213743921 0.02567954256404451 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 52847 10749 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54290993586 49.104 2 0.05438502289816858 0.004636746213743921 0.025683041782702674 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 12648 14069 DLDGIIAEVK True H1975_Epitope_Rep3 1071.58119018299 1071.58008993586 59.44 2 0.05438228531978605 0.004636746213743921 0.025684520039477632 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 17253 8137 EHAGGEVEL True PC9_epitope_Rep3 939.42977492203 939.42866993586 36.278 2 0.054374124115098926 0.004636746213743921 0.025688927438763512 ['ENSG00000218891|ENST00000325421|ZNF579'] 41017 12855 HTGPVFTV True PC9_epitope_Rep1 856.44430278736 856.44320993586 54.321 2 0.05436798302792428 0.004636746213743921 0.025692244337341668 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 65215 9840 LQRQLQAL True NCI_RA007_Epitope_Rep4 968.5767139392398 968.57560993586 44.697 2 0.05435703060695616 0.004636746213743921 0.02569816087094329 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|92|3|sense', 'HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|40|1|sense'] 86117 18647 QHVQEWWEL True PC9_epitope_Rep6 1253.5829215184897 1253.58182993586 84.369 2 0.05435702735347281 0.004636746213743921 0.025698162628667937 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1'] 99284 9304 SHQTGVVAL True PC9_epitope_Rep5 910.4872302284999 910.48612993586 40.741 2 0.05435348607421101 0.004636746213743921 0.025700075901903215 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 117881 11591 TWFNQPARKI True PC9_epitope_Rep2 1259.6774906096698 1259.67583490379 49.912 3 0.054351366655059304 0.004636746213743921 0.02570122103758245 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 5220 20995 ALPEDLVEV True PC9_epitope_Rep2 983.5175272972699 983.51642993586 86.209 2 0.05433762160553355 0.004636746213743921 0.025708648690834394 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 112502 15582 TLDPQTGLFY True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 65.353 2 0.054316346797263056 0.004636746213743921 0.02572014914334666 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 27846 7600 FQDGTKATF True PC9_epitope_Rep6 1013.4818104948899 1013.48070993586 38.517 2 0.05430689228048343 0.004636746213743921 0.025725261426781793 ['ENSG00000110711|ENST00000279146|AIP'] 35781 15821 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 66.011 2 0.054301082061658144 0.004636746213743921 0.025728403605042693 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 37613 19543 GVVTDLITV True PC9_epitope_Rep6 915.52769805815 915.52660993586 87.835 2 0.054293306301318116 0.004636746213743921 0.025732609292923727 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3'] 21933 8501 ESDYALRY True H1975_Epitope_Rep2 1015.46107505031 1015.45996993586 37.653 2 0.054286574781129464 0.004636746213743921 0.025736250680884393 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1'] 106483 11504 STLDGSLHAV True PC9_epitope_Rep2 998.5032742154599 998.50216993586 49.574 2 0.05428372186135615 0.004636746213743921 0.025737794096005216 ['ENSG00000178607|ENST00000433197|ERN1', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 35484 11023 GSLNWVPVTK True NCI_RA007_Epitope_Rep1 1099.6025943339098 1099.6014899358602 46.873 2 0.054258018099460945 0.004656313709697717 0.02575170345926037 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE', 'chr1:206016145-206021049|372|16.44|0.89|4.2|-|ENST00000360218|CTSE,CTSE'] 32059 9317 GESAEAFVA True H1975_Epitope_Rep2 879.3974121645899 879.39686496793 40.798 1 0.05425481132809357 0.004656313709697717 0.02575343924999527 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000581012.6_1_17:30190380-30195078:-|nuORF'] 87156 17966 QPFGDHIISV True PC9_epitope_Rep2 1111.56620882519 1111.5651099358602 74.41 2 0.054240562582982196 0.004656313709697717 0.02576115321599267 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 96097 9589 RYMNHMQSL True PC9_epitope_Rep5 1178.5324832521 1178.5308449037902 41.845 3 0.05419726916991213 0.004656313709697717 0.025784604109047995 ['ENSG00000166233|ENST00000379887|ARIH1'] 22884 14590 EVDPNIQAV True PC9_epitope_Rep5 983.4923751785898 983.49126993586 61.122 2 0.05419302251830602 0.004656313709697717 0.025786905442307193 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000433288.2_1_1:151922871-151923141:-|nuORF', 'ENST00000441609.1_1_6:162989483-162989972:+|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 100368 6169 SKSSTAVYL True NCI_RA007_Epitope_Rep3 954.5022115862998 954.50110993586 31.268 2 0.05417591633372239 0.004656313709697717 0.025796177449574964 ['ENSG00000204217|ENST00000374580|BMPR2'] 68365 14311 LTEPTGLLY True H1975_Epitope_Rep3 1005.5382627418498 1005.53716993586 60.393 2 0.05417350975357217 0.004656313709697717 0.025797482120854753 ['ENSG00000168758|ENST00000305476|SEMA4C'] 45709 17175 IRPENVIIY True PC9_epitope_Rep1 1115.6338944621898 1115.63278993586 70.885 2 0.05415783677782927 0.004656313709697717 0.025805980312246516 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'ABHD17B|p.G168C|1|0.49|ENSG00000107362|chr9:71870228-71870228|C/A|missense_variant'] 93070 13762 RPNDIMAEV True PC9_epitope_Rep3 1043.50697969691 1043.50588993586 58.018 2 0.05415657626915049 0.004656313709697717 0.025806663893978146 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 40102 12291 HPWETVTTAA True PC9_epitope_Rep1 1111.52982331647 1111.5287299358602 52.13 2 0.05414851730159743 0.004656313709697717 0.025811034707707216 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 32184 5331 GEVTNVTTA True NCI_RA007_Epitope_Rep3 890.4345259493 890.43342993586 27.978 2 0.05414277191053207 0.004656313709697717 0.025814151150730314 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 41126 15587 HTVGELIEV True PC9_epitope_Rep4 995.5287606873098 995.52821496793 67.876 1 0.05414224899504088 0.004656313709697717 0.025814434809916537 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 71803 7478 MEGPTPVSA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 33.712 1 0.05414051782075581 0.004656313709697717 0.025815373917605293 ['ENSG00000198786|ENST00000361567|MT-ND5'] 125274 18570 VILPKFTAV True PC9_epitope_Rep4 986.6164534929 986.61534993586 79.507 2 0.05413850225882976 0.004656313709697717 0.02581646733540643 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 24675 20803 FALPGLLHA True PC9_epitope_Rep3 937.5385375253701 937.53744993586 85.29 2 0.05413084317227231 0.004656313709697717 0.02582062267681219 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 132690 4998 VVGVGMTK True NCI_RA007_Epitope_Rep4 789.44186025921 789.44076993586 25.705 2 0.0541293736710884 0.004656313709697717 0.02582142000509511 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 92994 6393 RPKPIITSV True PC9_epitope_Rep4 1009.62841515893 1009.62730993586 31.681 2 0.05412512864488059 0.004656313709697717 0.025823723414192482 ['ENSG00000168802|ENST00000448552|CHTF8'] 77234 11260 NRWKQSVEL True PC9_epitope_Rep5 1158.61455599994 1158.6129149037902 48.302 3 0.05412402089155512 0.004656313709697717 0.025824324526680733 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 6376 6053 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 30.277 2 0.05412231205219873 0.004656313709697717 0.025825251837858387 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 40735 4697 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 23.437 3 0.05411228347425376 0.004656313709697717 0.02583069450557906 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 31856 5526 GELAIKDANA True NCI_RA007_Epitope_Rep3 1000.5189242795999 1000.51782993586 28.734 2 0.0541000361798843 0.004656313709697717 0.025837342706166794 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 69535 14166 LVDDNYFY True H1975_Epitope_Rep2 1047.45492704071 1047.45382993586 59.643 2 0.054089001603459974 0.004656313709697717 0.025843333925831675 ['ENSG00000174231|ENST00000304992|PRPF8'] 75234 14781 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.4888299358602 62.234 2 0.054085251586492876 0.004656313709697717 0.02584537028099509 ['ENSG00000116285|ENST00000377482|ERRFI1'] 100516 21988 SLASLLVSV True PC9_epitope_Rep4 887.5327834385901 887.5322349679301 92.797 1 0.05407961538194027 0.004656313709697717 0.02584843115594134 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 40200 13034 HQGATPLVL True PC9_epitope_Rep3 934.5236157372199 934.52250993586 55.161 2 0.054074739031426546 0.004656313709697717 0.02585107963733868 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 142337 10139 YYEEQHPEL True PC9_epitope_Rep4 1206.5193182024198 1206.51822993586 46.678 2 0.05407172097565451 0.004656313709697717 0.025852718949615976 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 47220 19884 IVAPGTFEV True PC9_epitope_Rep2 931.5014833103099 931.50038993586 81.877 2 0.05407005255689469 0.004656313709697717 0.025853625221986608 ['ENSG00000143621|ENST00000361891|ILF2'] 35974 20158 GTVEQIVYL True PC9_epitope_Rep4 1020.5491617787197 1020.54806993586 85.674 2 0.05406490460358889 0.004656313709697717 0.025856421731273227 ['ENSG00000182481|ENST00000330459|KPNA2'] 141062 10078 YSNKEIFL True H1975_Epitope_Rep1 1012.5229470308799 1012.5223749679301 43.701 1 0.054039445591210794 0.004656313709697717 0.025870255767359216 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 87572 8450 QQLGKVVQV True PC9_epitope_Rep6 997.5920296502098 997.59092993586 42.202 2 0.054028426550399224 0.004656313709697717 0.025876245410129117 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 98130 9785 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 42.625 2 0.05402304030654779 0.004656313709697717 0.025879173675945825 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 127650 9810 VPAGGAVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 43.071 1 0.05401955207764864 0.004656313709697717 0.02588107023293926 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 12481 10663 DKDEIPTISSY True H1975_Epitope_Rep1 1266.59796244594 1266.59686993586 45.973 2 0.05401521091185089 0.004656313709697717 0.025883430708128367 ['ENSG00000227729|ENST00000557640|RD3L'] 97265 8519 SEAEKVYIV True H1975_Epitope_Rep2 1036.5440763982797 1036.54357496793 37.723 1 0.05399919758803672 0.004656313709697717 0.025892139504184435 ['ENSG00000075914|ENST00000265564|EXOSC7'] 113584 19415 TLVEDFPSA True PC9_epitope_Rep2 977.4705771048499 977.46948993586 80.058 2 0.05399279826733882 0.004656313709697717 0.025895620492138054 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant'] 57819 7706 LEESSPIA True H1975_Epitope_Rep2 844.4178132559999 844.41726496793 34.595 1 0.053992644626290394 0.004656313709697717 0.02589570407222306 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 40513 12808 HRDWVSSQL True PC9_epitope_Rep5 1126.55195574338 1126.5503249037902 54.277 3 0.05398930189648105 0.004656313709697717 0.02589752256329891 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000533676.5_1_11:61641288-61643947:-|nuORF', 'ENST00000529404.5_1_11:61643581-61643947:-|nuORF'] 127428 9842 VNFTVDQIR True NCI_RA007_Epitope_Rep4 1090.5771078620598 1090.5760099358602 44.704 2 0.05398887126654076 0.004656313709697717 0.025897756840276016 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 48293 9833 IYQRDPLKL True PC9_epitope_Rep6 1144.6604435631998 1144.65880490379 48.29 3 0.05398387112150429 0.004656313709697717 0.025900477224740755 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 107852 9128 SVVGPVKGV True PC9_epitope_Rep5 840.5069030439199 840.50580993586 40.057 2 0.05397849760535223 0.004656313709697717 0.025903401032588085 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 78190 12971 NYDKVEKLF True PC9_epitope_Rep4 1154.5971746003 1154.59552490379 57.786 3 0.0539730767398658 0.004656313709697717 0.02590635090485036 ['ENSG00000176102|ENST00000323959|CSTF3'] 104979 13603 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59449490379 57.346 3 0.05396931785061965 0.004656313709697717 0.025908396557020076 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 110055 7496 TELESTVSA True H1975_Epitope_Rep2 935.4447562798299 935.44364993586 33.783 2 0.05396828086053341 0.004656313709697717 0.02590896093044022 ['ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 7977 15575 ATDFDVLSY True H1975_Epitope_Rep1 1029.46549172441 1029.46497496793 65.19 1 0.05396744870605354 0.004656313709697717 0.025909413831748735 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 76681 21294 NQSELAVLL True PC9_epitope_Rep2 985.5444107514498 985.5438649679301 87.37 1 0.05396390798259871 0.004656313709697717 0.025911340955382754 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 132317 19856 VTYGFPIML True H1975_Epitope_Rep3 1039.5412399473098 1039.5401499358602 83.13 2 0.05396149342515773 0.004656313709697717 0.025912655210134805 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF', 'CLCN7|p.N576I|1|0.15|ENSG00000103249|chr16:1449036-1449036|T/A|missense_variant'] 79260 8400 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 37.682 2 0.05394171005175833 0.004656313709697717 0.025923425650953548 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 132174 10860 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 49.778 2 0.05393058189538323 0.004656313709697717 0.02592948579883953 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 98163 8259 SESRFFVSS True H1975_Epitope_Rep3 1044.48762415132 1044.4870749679299 36.754 1 0.053918474270132036 0.004670550421856167 0.025936080791809188 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 1123 7613 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43324496793 34.237 1 0.05391725883286286 0.004670550421856167 0.02593674292078393 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 114824 21589 TQLNMFQTL True PC9_epitope_Rep5 1094.54303085246 1094.54247496793 88.082 1 0.053909580161252954 0.004670550421856167 0.02594092635206834 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 104085 16869 SQDTSFTTL True PC9_epitope_Rep1 998.4556553167 998.45454993586 69.711 2 0.05390056894829919 0.004670550421856167 0.025945836541991955 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 126232 4686 VLGPTPVQK True NCI_RA007_Epitope_Rep3 937.55966689277 937.55856993586 25.378 2 0.05390014831777869 0.004670550421856167 0.025946065763056057 ['ENSG00000166225|ENST00000549921|FRS2'] 114324 20876 TPQSLFILFG True H1975_Epitope_Rep1 1121.6120963884498 1121.61098993586 86.743 2 0.05389349070420862 0.004670550421856167 0.025949694047889656 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 109636 9585 TEALHFVAA True H1975_Epitope_Rep2 957.4919812557698 957.49088993586 41.845 2 0.05387058411651833 0.004670550421856167 0.025962181231791028 ['ENSG00000125817|ENST00000379751|CENPB'] 25585 10921 FELFADKVPK True NCI_RA007_Epitope_Rep1 1192.6492101731599 1192.64755490379 46.473 3 0.05386200574621685 0.004670550421856167 0.025966858993415803 ['ENSG00000196262|ENST00000468812|PPIA'] 135209 9101 WETVTTAA True H1975_Epitope_Rep3 877.4181476091699 877.4175949679301 39.995 1 0.05385138369895063 0.004670550421856167 0.025972652217228522 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 49066 9761 KEIDGSEIVKF True H1975_Epitope_Rep2 1263.6710678165498 1263.66943490379 42.535 3 0.053841604554052166 0.004670550421856167 0.025977986753374017 ['DOCK4|p.L1501*|1|0.32|ENSG00000128512|chr7:111747332-111747332|G/-|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4', 'ENST00000476846.1_7:111503332-111846439:-|nuORF'] 36016 19175 GTYDIFYTA True PC9_epitope_Rep6 1049.47057710485 1049.46948993586 86.409 2 0.053839480103420864 0.004670550421856167 0.025979145774257306 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 76435 20310 NQFNSFISV True PC9_epitope_Rep4 1054.5083595959 1054.5072699358602 86.265 2 0.053823405440490184 0.004670550421856167 0.025987917017564702 ['ENSG00000136021|ENST00000360820|SCYL2'] 48292 9830 IYQRDPLKL True PC9_epitope_Rep6 1144.6604435631998 1144.65934993586 48.276 2 0.05382241035611652 0.004670550421856167 0.025988460079316666 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 111457 11885 THTTPVLL True PC9_epitope_Rep1 880.5018176634799 880.50072993586 50.581 2 0.05380055709786795 0.004670550421856167 0.026000388947548685 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 29393 15351 FVDPNGKISL True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 66.98 2 0.053777179452124936 0.004670550421856167 0.02601315537422195 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 24413 15921 FADDMYSLY True H1975_Epitope_Rep3 1123.45321278855 1123.4526749679299 66.691 1 0.053774060565134035 0.004670550421856167 0.02601485901057871 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 2915 7682 AEYINEAAA True NCI_RA007_Epitope_Rep5 950.4345259492999 950.43342993586 36.252 2 0.053743977373535506 0.004670550421856167 0.026031296570637356 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 1445 11352 AEEGGFAVV True H1975_Epitope_Rep2 877.4181476091699 877.4175949679301 48.715 1 0.05373394967576086 0.004670550421856167 0.02603677781516233 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 23338 10994 EVRESLAEL True PC9_epitope_Rep5 1044.54513902744 1044.5440499358601 47.277 2 0.053723827115135285 0.004670550421856167 0.026042311965616186 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A'] 1458 7689 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40194496793 34.559 1 0.0537189604164856 0.004670550421856167 0.02604497303683499 ['ENSG00000173545|ENST00000308683|ZNF622'] 49017 11672 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 51.857 2 0.05371338014678054 0.004670550421856167 0.02604802458389594 ['ENSG00000197747|ENST00000368811|S100A10'] 142594 13855 YYLTHGLYL True NCI_RA007_Epitope_Rep4 1141.58079626017 1141.5796899358602 60.555 2 0.053712197747803093 0.004670550421856167 0.02604867121510061 ['nc|ENSG00000101464|Q9H490-2|PIGU', 'ENSG00000101464|ENST00000217446|PIGU'] 13942 19625 DRAIPLVL True PC9_epitope_Rep2 895.5491022090699 895.54800993586 80.872 2 0.05370272623723105 0.004670550421856167 0.026053851522704476 ['ENSG00000103381|ENST00000381774|CPPED1'] 127688 9462 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.4914349679301 44.004 1 0.05369289470914579 0.004670550421856167 0.026059229716840767 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 111900 15749 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 65.735 2 0.053689678734345776 0.004670550421856167 0.02606098918570366 ['ENSG00000213719|ENST00000375784|CLIC1'] 139057 17651 YLDAIPPTFY True H1975_Epitope_Rep2 1198.5910265907 1198.58992993586 73.215 2 0.05367813660647333 0.004670550421856167 0.02606730479624872 ['nc|ENSG00000092969|P61812-2|TGFB2'] 107493 3111 SVNGKVLSK True NCI_RA007_Epitope_Rep2 930.5498304850599 930.54872993586 16.72 2 0.053676606233838534 0.004670550421856167 0.026068142287440716 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 92763 14750 RPADVIFAT True PC9_epitope_Rep1 988.5341804209199 988.53308993586 61.555 2 0.05367446711105111 0.004670550421856167 0.026069312955626013 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 54211 17150 KVVNIVPVI True PC9_epitope_Rep6 979.6430025939098 979.64190993586 78.553 2 0.05366113466271095 0.004670550421856167 0.026076610410935692 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 32080 6744 GESPTTPPTP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 30.855 2 0.05364222098061637 0.004670550421856167 0.02608696588105197 ['ENSG00000173327|ENST00000309100|MAP3K11', 'nc|ENSG00000173327|Q16584-2|MAP3K11'] 113996 11035 TPAPHSPWTA True PC9_epitope_Rep1 1063.50869394907 1063.50758993586 47.334 2 0.0536375017190504 0.004670550421856167 0.026089550310400837 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 79261 8490 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 38.022 2 0.05362978207393582 0.004670550421856167 0.02609377834898668 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 61953 21202 LLDLLSELY True H1975_Epitope_Rep3 1077.59577761797 1077.59468993586 88.554 2 0.05362580894231166 0.004670550421856167 0.026095954667669948 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 749 16127 AAVPGKTFVNI True PC9_epitope_Rep1 1115.63389446219 1115.63278993586 66.849 2 0.05362300248929218 0.004670550421856167 0.02609749202599661 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 48071 21122 IYMDTLNIF True PC9_epitope_Rep6 1128.5525329069999 1128.5514299358601 94.087 2 0.05361402959180917 0.004670550421856167 0.026102407872555026 ['ENSG00000165678|ENST00000372134|GHITM'] 4733 9678 ALDFIASK True NCI_RA007_Epitope_Rep1 863.47526856247 863.47416993586 41.645 2 0.053604228147885034 0.004670550421856167 0.026107778593987673 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 88984 19861 QVIPQFQTV True PC9_epitope_Rep2 1058.5760452328998 1058.57547496793 81.787 1 0.053597107644979006 0.004670550421856167 0.0261116809114266 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 59781 15628 LGEHNIDVLEG True PC9_epitope_Rep3 1194.5880664685799 1194.58696993586 65.26 2 0.05358562318675753 0.004670550421856167 0.02611797595432977 ['CON__P00761'] 105516 5061 SSAGPGLLK True NCI_RA007_Epitope_Rep3 828.4705175352 828.46942993586 26.901 2 0.05358560255376705 0.004670550421856167 0.026117987265238878 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 2827 7182 AEVDAAMAA True NCI_RA007_Epitope_Rep3 847.3745685450299 847.3740149679301 35.363 1 0.05357242908817365 0.004670550421856167 0.026125209796869008 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 130814 20369 VTAPSGILDV True PC9_epitope_Rep3 970.53351171458 970.53240993586 83.599 2 0.053571879099534946 0.004670550421856167 0.026125511374670694 ['ENSG00000162063|ENST00000397066|CCNF'] 114798 17596 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 75.697 2 0.053567495457561065 0.004670550421856167 0.026127915189161233 ['ENSG00000119616|ENST00000341162|FCF1'] 76136 9641 NMVAKVDEV True PC9_epitope_Rep2 1003.5008316873099 1003.49972993586 42.425 2 0.05356567747064971 0.004670550421856167 0.02612891215904536 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 104504 20743 SQMPTVIYV True PC9_epitope_Rep3 1036.5263181591597 1036.5252299358601 85.056 2 0.0535637980605422 0.004670550421856167 0.026129942848892515 ['ENSG00000121931|ENST00000369763|LRIF1'] 23780 23810 EYGSIIAFF True PC9_epitope_Rep5 1045.51204799401 1045.5114749679299 96.566 1 0.0535573103972917 0.004670550421856167 0.026133501038019768 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 87422 15701 QPYMPTVSA True PC9_epitope_Rep2 992.4637179025999 992.46262993586 65.67 2 0.05355487126345143 0.004670550421856167 0.02613483890502304 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 105640 16426 SSDVLVFDY True H1975_Epitope_Rep2 1043.48114178855 1043.48057496793 68.404 1 0.05355262808163086 0.004670550421856167 0.026136069346537436 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF'] 21210 8989 ERDPATYNI True PC9_epitope_Rep4 1077.5090878718902 1077.50798993586 42.131 2 0.05354721010658711 0.004670550421856167 0.02613904145664031 ['ENSG00000138246|ENST00000260818|DNAJC13'] 111548 9548 TIAPALVSK True PC9_epitope_Rep1 898.5487678559 898.54766993586 41.584 2 0.05354342860269731 0.004670550421856167 0.026141116036431572 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 47294 21038 IVDPLLIVI True NCI_RA007_Epitope_Rep4 993.6474192680099 993.64632993586 91.198 2 0.05353291578508298 0.004670550421856167 0.02614688427609398 ['ENSG00000167360|ENST00000300778|OR51Q1', 'OR51Q1|p.I209M|1|0.11|ENSG00000167360|chr11:5422827-5422827|T/G|missense_variant'] 48430 18393 IYVTGGHLF True PC9_epitope_Rep5 1005.52836676449 1005.52726993586 75.767 2 0.053506651632233976 0.004670550421856167 0.02616130005992063 ['ENSG00000130487|ENST00000648057|KLHDC7B', 'nc|ENSG00000130487|Q96G42|KLHDC7B'] 60978 13449 LIDVGTGYY True H1975_Epitope_Rep3 999.49131254943 999.4907749679301 57.005 1 0.05350649780495316 0.004670550421856167 0.026161384513189664 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 125319 6448 VIPELNGK True NCI_RA007_Epitope_Rep5 868.50181766348 868.50072993586 31.469 2 0.05349973799755597 0.004670550421856167 0.026165095981444206 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 6971 14282 AQLEAALQQA True PC9_epitope_Rep4 1041.54547338061 1041.54436993586 62.837 2 0.05349075753867122 0.004670550421856167 0.026170027429302998 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 43949 8229 IIDPNGVIK True H1975_Epitope_Rep1 967.57023157647 967.56912993586 36.596 2 0.05349055342084976 0.004670550421856167 0.026170139526426748 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 33477 14132 GLATDVQTV True PC9_epitope_Rep5 902.47091145802 902.46980993586 59.37 2 0.053487602292412686 0.004670550421856167 0.026171760271023952 ['ENSG00000277791|ENST00000619426|PSMB3'] 117838 19803 TVYEGFISA True PC9_epitope_Rep2 985.4756624852898 985.47456993586 81.561 2 0.05348631667106519 0.004670550421856167 0.026172466355891516 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 85433 12525 QEYFGSLAA True H1975_Epitope_Rep3 984.4552613938797 984.45471496793 53.374 1 0.05348348403222526 0.004670550421856167 0.026174022149225346 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 34757 19605 GQFGVGFYSA True PC9_epitope_Rep4 1031.4712458111896 1031.4706749679299 83.536 1 0.053472283774668464 0.004670550421856167 0.026180174572407643 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 4159 15040 AHTPVIISV True PC9_epitope_Rep1 935.54401682863 935.54290993586 62.67 2 0.05346130748289517 0.004670550421856167 0.02618620523014542 ['ENSG00000182993|ENST00000330828|C12orf60'] 103421 7559 SPPPPPPPP True PC9_epitope_Rep4 881.4647038787699 881.46360993586 36.451 2 0.05345522037340548 0.004670550421856167 0.02618955018338031 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 90521 7171 RELTPQVVSA True NCI_RA007_Epitope_Rep5 1098.6033226099 1098.6022299358601 34.258 2 0.05345181575487432 0.004670550421856167 0.026191421237185094 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL|p.A668V|1|0.19|ENSG00000035403|chr10:74101078-74101078|C/T|missense_variant'] 4651 15438 ALAEEVEQV True PC9_epitope_Rep2 986.4920408254198 986.49094993586 64.661 2 0.053439726650322664 0.004670550421856167 0.026198065937791913 ['ENSG00000128335|ENST00000358502|APOL2'] 36523 5081 GVGPVPARA True PC9_epitope_Rep4 822.47118624154 822.47008993586 26.194 2 0.05343878702196335 0.004670550421856167 0.026198582462101654 ['ENSG00000129636|ENST00000320640|ITFG1'] 1623 12402 AEFLPDPSA True H1975_Epitope_Rep2 945.4443623570099 945.44326993586 52.79 2 0.05342592155595141 0.004670550421856167 0.02620565567480255 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 104011 15175 SQDFPGSNL True PC9_epitope_Rep4 963.42977492203 963.42866993586 66.296 2 0.0534243094311088 0.004670550421856167 0.026206542114433143 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 98178 8357 SESVTEITA True H1975_Epitope_Rep3 935.44475627983 935.44364993586 37.129 2 0.053422687634780024 0.004670550421856167 0.026207433899205042 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 33158 11115 GIVEFASK True PC9_epitope_Rep5 849.45961849833 849.45852993586 47.744 2 0.05341100682794892 0.004670550421856167 0.026213857685217726 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 6157 11456 APM[Oxidation]PPIIHA True PC9_epitope_Rep5 961.50552352537 961.50442993586 49.064 2 0.05340883290768012 0.004670550421856167 0.026215053375165328 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 100936 9030 SLFGSPVAK True NCI_RA007_Epitope_Rep1 904.50181766348 904.50072993586 39.128 2 0.053407746127829975 0.004670550421856167 0.026215651139360592 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 118132 16612 TYIKFVNLF True NCI_RA007_Epitope_Rep4 1143.63283183303 1143.6317299358602 72.017 2 0.05339598965326262 0.004670550421856167 0.026222118365230775 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 39879 7110 HPDYNNEL True PC9_epitope_Rep2 1000.4250238947601 1000.42392993586 32.745 2 0.053384162239910556 0.004670550421856167 0.02622862606155778 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 1433 14593 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48601496793 61.5 1 0.0533775290911069 0.004670550421856167 0.02623227639756263 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 60563 14430 LHFFM[Oxidation]PGFAP True H1975_Epitope_Rep1 1178.5582873742198 1178.5571899358602 60.7 2 0.053370719229791044 0.004670550421856167 0.026236024456563065 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000416519.1_1_7:55713940-55714147:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 106805 20227 SVAGGFVGL True PC9_epitope_Rep2 805.4334037504899 805.4328549679301 83.221 1 0.05336828026382389 0.004670550421856167 0.026237366948742676 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6'] 80377 8667 PGHLQEGFG True PC9_epitope_Rep1 940.4402800360799 940.43918993586 38.177 2 0.053367199777261724 0.004670550421856167 0.02623796170607638 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 95695 12870 RYFKGPELL True PC9_epitope_Rep6 1121.6233297784897 1121.62222993586 61.024 2 0.05336678253337413 0.004670550421856167 0.026238191382571406 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 58847 9273 LESTPSPVV True H1975_Epitope_Rep2 927.49131254943 927.4907649679301 40.624 1 0.0533663126935305 0.004670550421856167 0.026238450013253114 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 71145 21702 LYLPSFFTY True PC9_epitope_Rep6 1149.57464825057 1149.5740749679298 96.363 1 0.05336540957533735 0.004670550421856167 0.026238947155206502 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 93002 9129 RPKPSSSPVIF True PC9_epitope_Rep2 1213.68190728377 1213.68080993586 40.453 2 0.05336498368589278 0.004670550421856167 0.02623918159867704 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 294 15768 AAGTVFTTV True PC9_epitope_Rep4 865.4545331178899 865.4539849679301 68.574 1 0.05336071937402834 0.004670550421856167 0.026241529119371457 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 142891 19266 YYTSVTPVL True PC9_epitope_Rep4 1041.5382627418498 1041.53767496793 82.209 1 0.05335448774923949 0.004670550421856167 0.026244959993184137 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 76750 18742 NQVSTIVSL True PC9_epitope_Rep4 959.52876068731 959.52766993586 80.175 2 0.05335070067975858 0.004670550421856167 0.026247045193320787 ['ENSG00000092148|ENST00000399332|HECTD1'] 2037 4492 AEKRDPQELVA True H1975_Epitope_Rep3 1254.65681473474 1254.65515490379 22.398 3 0.05334848822276055 0.004670550421856167 0.026248263464234076 ['ENST00000580601.5_1_17:73689468-73702598:+|nuORF', 'nc|ENSG00000161526|Q9UHR5-2|SAP30BP', 'ENSG00000161526|ENST00000584667|SAP30BP', 'ENST00000577292.5_1_17:73663452-73698652:+|nuORF'] 128304 6463 VPPPPPIAR True NCI_RA007_Epitope_Rep1 942.56508662638 942.56398993586 29.162 2 0.0533469056734398 0.004670550421856167 0.026249134912940543 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 24416 15277 FADEGSIFY True H1975_Epitope_Rep2 1047.45492704071 1047.4543749679299 63.921 1 0.05334380826634219 0.004670550421856167 0.026250840610495943 ['nc|ENSG00000107745|Q9BPX6-2|MICU1', 'ENSG00000107745|ENST00000361114|MICU1', 'nc|ENSG00000107745|Q9BPX6-3|MICU1', 'nc|ENSG00000107745|Q9BPX6-6|MICU1'] 44187 9358 IIYGGSVTG True NCI_RA007_Epitope_Rep1 865.45453311789 865.4539849679301 40.394 1 0.053343024623848295 0.004670550421856167 0.026251272166940703 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 142833 8245 YYSPTKNEI True PC9_epitope_Rep6 1113.53423999057 1113.5331499358601 41.301 2 0.05334139642594163 0.004670550421856167 0.026252168845314977 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 18844 12051 ELDPNNAVYY True H1975_Epitope_Rep3 1196.53496826656 1196.53437496793 51.515 1 0.05333722400848385 0.004670550421856167 0.026254466797605135 ['ENSG00000197860|ENST00000381007|SGTB'] 42493 15205 IEEIEGLISA True H1975_Epitope_Rep2 1072.56520576568 1072.5641099358602 63.642 2 0.05332893405091428 0.004670550421856167 0.026259033015027237 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 97269 11794 SEAFATVVTA True H1975_Epitope_Rep2 994.4971262058599 994.4965749679301 50.439 1 0.05330267197451174 0.004670550421856167 0.02627350322399749 ['nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 37422 17850 GVTEVLHGL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 73.679 2 0.05329226596057447 0.004670550421856167 0.02627923884248227 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion'] 111095 10296 THDTFQNEL True PC9_epitope_Rep2 1103.48835242731 1103.48724993586 44.933 2 0.05327480778273789 0.004670550421856167 0.026288864021825335 ['ENSG00000198642|ENST00000359039|KLHL9'] 142811 12779 YYSNLHQTF True PC9_epitope_Rep5 1171.52982331647 1171.5287299358602 54.163 2 0.05326161444447959 0.004693657287718682 0.02629613997809579 ['ENSG00000171806|ENST00000310392|METTL18'] 37981 12200 HAGVISVL True PC9_epitope_Rep6 794.46503823194 794.46448496793 58.294 1 0.05325544214068395 0.004693657287718682 0.026299544545536423 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 2874 16635 AEVISLFSA True H1975_Epitope_Rep3 935.49639792987 935.4958449679301 69.495 1 0.0532552734901571 0.004693657287718682 0.026299637576668 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 3835 22383 AGVPLFLLE True PC9_epitope_Rep4 957.5535188831699 957.55297496793 94.33 1 0.05323595618550746 0.004693657287718682 0.026310295359980338 ['ENSG00000157103|ENST00000287766|SLC6A1'] 23117 14062 EVISKLYAV True PC9_epitope_Rep6 1020.5855472874398 1020.58444993586 65.962 2 0.05322529340732914 0.004693657287718682 0.02631617991231293 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 109899 11645 TEFPGVVA True H1975_Epitope_Rep1 818.4174193331799 818.4168749679301 49.782 1 0.05321750892995236 0.004693657287718682 0.02632047674072105 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 8309 17678 ATINEVVQV True PC9_epitope_Rep2 971.52876068731 971.52766993586 73.279 2 0.053207804717810406 0.004693657287718682 0.026325834095427235 ['ENSG00000171940|ENST00000371471|ZNF217'] 71935 9776 MEQQTLSIA True H1975_Epitope_Rep3 1019.4957463068699 1019.4951749679301 42.626 1 0.05319593553478584 0.004693657287718682 0.02633238798664641 ['ENSG00000104738|ENST00000649973|MCM4'] 30479 10572 GAGAPVYL True H1975_Epitope_Rep1 746.3962899657799 746.39574496793 45.618 1 0.05318701759486604 0.004693657287718682 0.026337313233527754 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 58392 7342 LENPKKYIP True H1975_Epitope_Rep1 1100.62299542532 1100.62188993586 33.25 2 0.053185697054513544 0.004693657287718682 0.026338042618873188 ['ENSG00000172115|ENST00000305786|CYCS', 'CON__P62894'] 104868 16388 SRATSFLL True PC9_epitope_Rep5 893.49706663621 893.49596993586 68.034 2 0.0531799952847377 0.004693657287718682 0.026341192134504865 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 30485 10873 GAGAPVYL True H1975_Epitope_Rep3 746.3962899657799 746.39574496793 46.905 1 0.053179023193686385 0.004693657287718682 0.02634172912715732 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 43484 21483 IGLDGIPEV True PC9_epitope_Rep1 911.49639792987 911.4958449679301 87.477 1 0.05317702826727694 0.004693657287718682 0.026342831174922084 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'ENST00000546039.5_1_11:73589845-73611421:+|nuORF'] 9091 17277 AVIGDVIRV True PC9_epitope_Rep4 940.57056592964 940.56946993586 74.461 2 0.053176964507229134 0.004693657287718682 0.026342866398267027 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 99360 8799 SHTHVSVVI True PC9_epitope_Rep5 977.52942939365 977.52832993586 38.788 2 0.053172502610943556 0.004693657287718682 0.026345331415446968 ['ENSG00000151461|ENST00000357604|UPF2'] 6646 17955 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 77.118 2 0.053166479713859405 0.004693657287718682 0.026348659151110697 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 89409 14031 QYASAFHFL True NCI_RA007_Epitope_Rep4 1082.51853035678 1082.51742993586 61.253 2 0.05316461248481278 0.004693657287718682 0.026349690898208388 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 134591 13205 VYSHFNETL True PC9_epitope_Rep5 1108.5189242796 1108.5178299358602 55.8 2 0.053159751697526195 0.004710362798155943 0.02635237692168979 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 71253 17916 LYPQFMFHL True NCI_RA007_Epitope_Rep2 1194.5895871220598 1194.58848993586 74.427 2 0.05315506762346763 0.004710362798155943 0.026354965527927387 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 17715 15168 EHNSILQSL True PC9_epitope_Rep4 1039.52982331647 1039.5287299358602 66.27 2 0.05313686217011019 0.004710362798155943 0.026365028757653525 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1', 'KLC1|p.G290Afs*11|1|0.15|ENSG00000126214|chr14:103669580-103669580|G/-|frameshift_variant'] 89687 13291 RAADVLVYL True NCI_RA007_Epitope_Rep3 1018.5811306133398 1018.58002993586 59.548 2 0.05313670485901351 0.004710362798155943 0.026365115727833583 ['ENSG00000126391|ENST00000317568|FRMD8', 'nc|ENSG00000227942|Q9BZ68|FRMD8P1', 'nc|ENSG00000126391|Q9BZ67-3|FRMD8'] 90075 4735 REAEFTKSIA True NCI_RA007_Epitope_Rep3 1150.59823722946 1150.5971499358602 25.576 2 0.05313268272250333 0.004710362798155943 0.026367339472476856 ['ENSG00000118363|ENST00000263672|SPCS2'] 108291 20006 SYILRPVAF True PC9_epitope_Rep5 1064.60186605792 1064.6007699358602 82.007 2 0.053116513641516684 0.004710362798155943 0.026376280677346854 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant'] 34751 20621 GQFGVGFYSA True PC9_epitope_Rep1 1031.4712458111896 1031.47014993586 84.137 2 0.0531131869546011 0.004710362798155943 0.02637812061196252 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 29551 6352 FVIATSTK True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 31.109 2 0.05310842542439469 0.004710362798155943 0.026380754334920934 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 35050 8871 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 39.477 2 0.053104869912323424 0.004710362798155943 0.02638272113276833 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 109709 6810 TEDLKTLSA True H1975_Epitope_Rep2 976.50769088956 976.50658993586 31.112 2 0.053094129964087834 0.004710362798155943 0.026388662935515225 ['GPSM2|p.K514Rfs*17|1|0.1|ENSG00000121957|chr1:108922514-108922514|A/-|frameshift_variant', 'ENSG00000121957|ENST00000264126|GPSM2', 'nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-3|GPSM1'] 36271 16622 GVDVTLPRV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 69.182 2 0.05309218912430232 0.004710362798155943 0.026389736820070384 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 74730 8599 NHANGLTL True PC9_epitope_Rep1 838.4297153523801 838.4291649679301 37.911 1 0.05308322061074555 0.004710362798155943 0.02639469969123471 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 37970 14753 HAGVISVL True PC9_epitope_Rep1 794.46503823194 794.46448496793 61.566 1 0.0530819300454566 0.004710362798155943 0.026395413915289448 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 118736 16518 TYVSGTLRF True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 68.537 2 0.05308122071393439 0.004710362798155943 0.02639580648061132 ['ENSG00000134255|ENST00000357172|CEPT1'] 124710 12425 VHADVYRVL True PC9_epitope_Rep5 1070.58727862294 1070.5861899358601 52.792 2 0.05308044299477479 0.004710362798155943 0.026396236899728993 ['NCAPH|p.P292Qfs*3|1|0.09|ENSG00000121152|chr2:96351984-96351984|C/-|frameshift_variant', 'ENST00000477409.1_1_2:97001567-97024936:+|nuORF', 'nc|ENSG00000121152|Q15003-2|NCAPH', 'ENSG00000121152|ENST00000240423|NCAPH'] 99250 16679 SHNPLANIL True PC9_epitope_Rep6 977.52942939365 977.52832993586 76.626 2 0.05305993303120936 0.004710362798155943 0.026407590163078212 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 40705 9001 HRSDVLETV True PC9_epitope_Rep5 1054.54072235334 1054.5396299358601 39.567 2 0.053058912520247296 0.004710362798155943 0.026408155180124283 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 111562 17813 TIAQLVHAV True PC9_epitope_Rep5 950.5549158654999 950.55380993586 73.536 2 0.05304900272968075 0.004710362798155943 0.026413642408732615 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 86065 22201 QHSEIFWLL True PC9_epitope_Rep2 1171.60259433391 1171.6014899358602 90.878 2 0.053048767216857855 0.004710362798155943 0.026413772828861596 ['ENST00000565925.5_1_16:81015450-81030931:-|nuORF', 'ENST00000569187.5_1_16:81015453-81040468:-|nuORF'] 134587 20905 VYSGGVYLF True PC9_epitope_Rep4 1003.5014833103099 1003.50038993586 88.571 2 0.05304114137627295 0.004710362798155943 0.026417996109476448 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 76470 8502 NQGESITHAL True PC9_epitope_Rep4 1068.51998690876 1068.5188899358602 40.18 2 0.05303837880060359 0.004710362798155943 0.02641952620618753 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 90519 6908 RELTPQVVSA True NCI_RA007_Epitope_Rep3 1098.6033226099 1098.6022299358601 34.277 2 0.05303352849156423 0.004710362798155943 0.026422212819990146 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL|p.A668V|1|0.19|ENSG00000035403|chr10:74101078-74101078|C/T|missense_variant'] 49941 18731 KILPTLEAV True PC9_epitope_Rep3 982.60628273202 982.60518993586 77.272 2 0.05302472066023788 0.004710362798155943 0.026427092155389506 ['ENSG00000143621|ENST00000361891|ILF2'] 45271 12093 IPVNCPYRA True PC9_epitope_Rep5 1031.5222358382298 1031.52112993586 51.51 2 0.05301433548498399 0.004710362798155943 0.026432846342706144 ['ENSG00000121691|ENST00000241052|CAT', 'ENST00000525707.1_1_11:34482779-34490041:+|nuORF'] 98189 6745 SETEATPVP True NCI_RA007_Epitope_Rep4 929.4341915961298 929.43364496793 32.565 1 0.053003908765303136 0.004710362798155943 0.026438624680976786 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 92086 11173 RKVYSILSL True NCI_RA007_Epitope_Rep4 1077.65462990677 1077.6535299358602 49.85 2 0.052999417443428544 0.004710362798155943 0.026441114056650932 ['ENSG00000155957|ENST00000358230|TMBIM4'] 24024 22995 EYNAFFYSL True PC9_epitope_Rep5 1152.51277627 1152.51166993586 93.441 2 0.052985689849582934 0.004710362798155943 0.0264487240657211 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3', 'ENST00000491292.5_1_2:128018779-128018920:-|nuORF'] 111416 10594 THSLTTPVV True PC9_epitope_Rep5 953.51819600361 953.51708993586 45.738 2 0.05295215567039722 0.004710362798155943 0.026467322297817373 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 71130 20228 LYLPSFFTY True NCI_RA007_Epitope_Rep3 1149.57464825057 1149.5740749679298 88.135 1 0.05294940531957574 0.004710362798155943 0.026468848177898227 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 76817 4656 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 25.234 2 0.052930453195067964 0.004710362798155943 0.026479364864399117 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 134346 7948 VYPDGIRHI True PC9_epitope_Rep6 1068.5716285587998 1068.5705299358601 40.017 2 0.05290510290313716 0.004710362798155943 0.026493437812332443 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 17276 15448 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 64.698 2 0.05289054851884541 0.004710362798155943 0.026501520560522566 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 111190 13913 THIFTSDGL True PC9_epitope_Rep2 989.4818104948899 989.48070993586 58.795 2 0.05286966026535559 0.004710362798155943 0.02651312467997491 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 79276 9073 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 39.844 2 0.052859920171937344 0.004710362798155943 0.026518537185434787 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 72866 10221 MPQSGTGVSV True PC9_epitope_Rep4 961.45388149489 961.45333496793 46.993 1 0.05285949697491355 0.004710362798155943 0.02651877237571035 ['ENSG00000115233|ENST00000409682|PSMD14'] 87730 12071 QRALLANAL True PC9_epitope_Rep6 968.5767139392399 968.57560993586 57.749 2 0.05285894801065579 0.004710362798155943 0.026519077463479906 ['ENSG00000109133|ENST00000504986|TMEM33'] 28762 12602 FSSSAGPGL True PC9_epitope_Rep1 821.3919328613299 821.39082993586 53.342 2 0.05285564190045154 0.004710362798155943 0.026520914906194216 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 77878 10297 NVHAVFQEA True PC9_epitope_Rep1 1013.4930438849299 1013.49194993586 44.493 2 0.052853230913782835 0.004710362798155943 0.026522254936600036 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 26955 11749 FLDTNETPY True H1975_Epitope_Rep1 1098.48695544498 1098.48637496793 50.185 1 0.052852432368449304 0.004710362798155943 0.026522698782829573 ['ENSG00000079246|ENST00000392132|XRCC5'] 62499 21805 LLIPGLATA True PC9_epitope_Rep1 867.54295419947 867.54184993586 88.689 2 0.05285113230410774 0.004710362798155943 0.026523421396845197 ['ENSG00000125356|ENST00000371437|NDUFA1'] 103514 5568 SPREVTVQA True PC9_epitope_Rep5 985.51925863277 985.51816993586 26.421 2 0.05284305196143828 0.004710362798155943 0.026527913085482177 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 6278 4516 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 22.25 2 0.05283939688357671 0.004710362798155943 0.02652994508897278 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 47126 7559 ITVGDIGPK True NCI_RA007_Epitope_Rep3 898.5123823471799 898.51128993586 36.857 2 0.05283934742505177 0.004710362798155943 0.026529972585896778 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1'] 90452 6039 REIVMTQSP True NCI_RA007_Epitope_Rep5 1059.5382798251899 1059.5371899358602 29.911 2 0.05282626884441109 0.004710362798155943 0.02653724464181799 ['nc|ENSG00000243063|A0A075B6H7|IGKV3-7'] 90520 7570 RELTPQVVSA True NCI_RA007_Epitope_Rep4 1098.6033226099 1098.6022299358601 35.766 2 0.05282439422736235 0.004710362798155943 0.026538287127871457 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL|p.A668V|1|0.19|ENSG00000035403|chr10:74101078-74101078|C/T|missense_variant'] 73655 23776 MYIDPDLLAEL True PC9_epitope_Rep2 1291.6369908069498 1291.6358899358602 96.926 2 0.05281389071342377 0.004710362798155943 0.026544128876721793 ['ENSG00000104611|ENST00000265807|SH2D4A'] 25619 15306 FENFVTIEA True H1975_Epitope_Rep2 1068.51277627 1068.51166993586 64.033 2 0.05280758706616128 0.004710362798155943 0.026547635336294367 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1'] 71744 11046 MEENFAVEA True H1975_Epitope_Rep3 1038.4328116971399 1038.43227496793 47.579 1 0.05280665146056289 0.004710362798155943 0.02654815581063162 ['ENSG00000026025|ENST00000544301|VIM'] 76713 16687 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53911496793 69.322 1 0.052805065283314204 0.004710362798155943 0.026549038216785087 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'DYNLT3-U2AF2|2|fusion', 'DYNLT3-U2AF2|1|fusion'] 13939 12222 DRAGVTVL True PC9_epitope_Rep1 829.46576650793 829.46521496793 51.871 1 0.052787608347467624 0.004710362798155943 0.026558751423417508 ['nc|ENSG00000185513|Q9Y468-2|L3MBTL1', 'nc|ENSG00000185513|Q9Y468-3|L3MBTL1'] 31600 6066 GEEQPPQPP True H1975_Epitope_Rep2 977.4454249861699 977.44432993586 28.31 2 0.05278134630306305 0.004710362798155943 0.026562236462481653 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 92207 22253 RLIALLEVL True PC9_epitope_Rep2 1038.68011637862 1038.6790099358602 91.073 2 0.0527756032085427 0.004710362798155943 0.02656543304936699 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 86026 7952 QHQETINTL True PC9_epitope_Rep3 1082.5356369729 1082.53452993586 35.566 2 0.05275743502820238 0.004710362798155943 0.02657554767139827 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 25494 13512 FEFNDGAIA True H1975_Epitope_Rep2 982.4396113297397 982.4390649679301 57.109 1 0.0527540968149862 0.004710362798155943 0.02657740650341684 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 107170 21862 SVIIPGMTL True PC9_epitope_Rep2 929.52558988317 929.52448993586 89.567 2 0.05274038190007426 0.004710362798155943 0.026585044665069505 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 41432 18997 HYILHNSFF True PC9_epitope_Rep1 1176.5716285587998 1176.56998490379 77.858 3 0.05273538391294342 0.004710362798155943 0.026587828652639214 ['ENSG00000163659|ENST00000295924|TIPARP'] 104758 20612 SQVQQLISL True PC9_epitope_Rep2 1014.5709598524599 1014.56986993586 84.718 2 0.05273417274989739 0.004710362798155943 0.02658850333620228 ['ENSG00000021776|ENST00000156471|AQR', 'AQR|p.R163G|1|0.07|ENSG00000021776|chr15:34942065-34942065|G/C|missense_variant'] 72888 10497 MPSSVPLRA True PC9_epitope_Rep2 956.5113368013599 956.51022993586 45.698 2 0.05273067431648906 0.004710362798155943 0.02659045223983545 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 6397 5173 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 27.637 2 0.05271662200659756 0.004710362798155943 0.0265982817781428 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 36002 7499 GTWNGTTKV True PC9_epitope_Rep5 962.48214484806 962.48104993586 33.795 2 0.05270282683944919 0.004710362798155943 0.026605970057056304 ['ENSG00000176105|ENST00000314574|YES1'] 103728 5357 SPVFTSRSAA True PC9_epitope_Rep6 1021.51925863277 1021.51816993586 28.465 2 0.052699770435545155 0.004710362798155943 0.026607673712347398 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 76687 21498 NQSELAVLL True PC9_epitope_Rep5 985.5444107514498 985.5438649679301 87.728 1 0.05269398049536905 0.004710362798155943 0.02661090132331763 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 128747 5237 VPYGVGKAA True PC9_epitope_Rep6 860.4756029156398 860.4745099358599 27.928 2 0.0526869081927458 0.004710362798155943 0.02661484426602419 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 4177 17442 AHVPTLQVL True PC9_epitope_Rep5 976.5705659296399 976.56946993586 72.09 2 0.052684040776273804 0.004710362798155943 0.026616443054448147 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF', 'ENST00000592624.1_1_19:1242319-1242811:+|nuORF'] 62934 22591 LLPDYYLVTV True PC9_epitope_Rep2 1194.65362684726 1194.65252993586 92.396 2 0.052681453648110575 0.004710362798155943 0.026617885636206876 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 121805 16257 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.775 2 0.05266473760460803 0.004710362798155943 0.026627208188065975 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 142351 4581 YYEHVKARF True NCI_RA007_Epitope_Rep3 1211.60874234351 1211.60710490379 24.907 3 0.05265717764870241 0.004710362798155943 0.026631425344380764 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 23106 16421 EVISKLYAV True PC9_epitope_Rep1 1020.5855472874398 1020.58444993586 67.987 2 0.05264418355219819 0.004710362798155943 0.02663867521817442 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 39936 15964 HPIEPVLITA True PC9_epitope_Rep2 1088.62299542532 1088.62188993586 66.659 2 0.05263990346296264 0.004710362798155943 0.02664106362172759 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 48862 8480 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54861496793 37.57 1 0.05263237442219386 0.004710362798155943 0.026645265493033417 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 141805 18561 YVDDFGVSV True PC9_epitope_Rep6 999.4549270407099 999.45382993586 84.035 2 0.05262526913378696 0.004710362798155943 0.026649231418558406 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 9867 11337 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 51.385 2 0.05262091209385118 0.004724409448818898 0.026651663629167915 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 4647 8300 ALADGVQKV True PC9_epitope_Rep3 899.5076313199099 899.50652993586 36.899 2 0.05260256015874772 0.004724409448818898 0.02666191033361165 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 67475 5725 LSSSSFSR True PC9_epitope_Rep1 869.42429561877 869.42318993586 26.842 2 0.05259422869005524 0.004724409448818898 0.026666563331278145 ['LAMP1|p.N181S|1|0.39|ENSG00000185896|chr13:113310847-113310847|A/G|missense_variant'] 49006 11935 KEFPGFLEN True NCI_RA007_Epitope_Rep2 1079.5287606873098 1079.52766993586 51.028 2 0.0525899390320994 0.004724409448818898 0.026668959323758887 ['ENSG00000197747|ENST00000368811|S100A10'] 45401 10342 IQESNFDRV True PC9_epitope_Rep5 1106.5356369729 1106.53452993586 44.765 2 0.05258634758748651 0.004724409448818898 0.0266709654771175 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 115661 15821 TRYIAPTIL True PC9_epitope_Rep4 1046.6124307416198 1046.61132993586 68.779 2 0.05258427487971625 0.004724409448818898 0.02667212333738582 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 108296 24508 SYIPLFPQLYF True PC9_epitope_Rep1 1386.72237511342 1386.7212699358602 99.113 2 0.05257918152707861 0.004724409448818898 0.026674968788126512 ['ENSG00000165996|ENST00000361271|HACD1'] 131052 14181 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56516993586 59.722 2 0.05257477376419003 0.004724409448818898 0.02667743144741344 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 109307 10584 TAVTVNQSL True PC9_epitope_Rep6 931.4974605590301 931.49636993586 51.526 2 0.05257232593653704 0.004724409448818898 0.026678799160256582 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 134063 9329 VYKDHQTITI True PC9_epitope_Rep5 1216.6451874218799 1216.6435349037902 40.837 3 0.05255256111272869 0.004724409448818898 0.02668984497355283 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 98 13345 AAAPVVPAV True PC9_epitope_Rep6 793.4697892592098 793.46868993586 62.993 2 0.05255003856325443 0.004724409448818898 0.02669125502644376 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 33522 19298 GLDSQFVEV True PC9_epitope_Rep4 992.4814761417199 992.48036993586 82.335 2 0.05253824891918404 0.004724409448818898 0.026697846079617598 ['ENSG00000131389|ENST00000622186|SLC6A6'] 28128 16447 FRAPQVMTY True PC9_epitope_Rep3 1111.54845058607 1111.5473499358602 68.4 2 0.05253258083732601 0.004724409448818898 0.026701015365965093 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263', 'CCDC113|p.V325I|1|0.42|ENSG00000103021|chr16:58278563-58278563|G/A|missense_variant'] 87839 14909 QRGPPIIL True PC9_epitope_Rep1 892.5494365622399 892.54832993586 62.169 2 0.05253091793118223 0.004724409448818898 0.02670194523764477 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 128623 10219 VPVDTGVAA True PC9_epitope_Rep1 827.4388830537498 827.43833496793 44.188 1 0.05252426094821922 0.004724409448818898 0.026705668011720623 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 142822 13744 YYSPHGHILVL True PC9_epitope_Rep6 1297.68190728377 1297.68025490379 64.659 3 0.05252309953414182 0.004724409448818898 0.02670631755519829 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 70934 19827 LYGAPGVEF True PC9_epitope_Rep4 951.4701831820299 951.46963496793 84.393 1 0.05252183117037266 0.004724409448818898 0.026707026928572623 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 30486 10607 GAGAPVYLAA True H1975_Epitope_Rep1 888.4705175351999 888.4699649679301 45.754 1 0.05251628033969566 0.004724409448818898 0.026710131608706254 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 96949 6376 SAVTSVAKV True PC9_epitope_Rep4 860.4967322830399 860.49562993586 31.611 2 0.05251503324577249 0.004724409448818898 0.026710829175479005 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 48652 7369 KASAVYQAL True NCI_RA007_Epitope_Rep4 949.5232813840499 949.52218993586 34.985 2 0.05251456280283094 0.004724409448818898 0.02671109232379072 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 47961 20861 IYIWDLNNF True NCI_RA007_Epitope_Rep2 1196.5866099165999 1196.58550993586 86.279 2 0.05251056505912206 0.004724409448818898 0.026713328607049495 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 66117 10819 LSELEDRVAV True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 46.694 2 0.05249948186624549 0.004724409448818898 0.026719529272404785 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH'] 142583 19611 YYLSKIEEL True PC9_epitope_Rep3 1156.6015912743999 1156.6004899358602 80.67 2 0.05249817859473162 0.004724409448818898 0.026720258492865943 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5'] 17838 5061 EHTQTVSQL True PC9_epitope_Rep2 1041.50908787189 1041.50798993586 24.841 2 0.05248606116127759 0.004724409448818898 0.026727039424212683 ['ENSG00000135968|ENST00000309863|GCC2'] 4148 7283 AHTAEVNCL True PC9_epitope_Rep4 956.43856578392 956.43746993586 35.329 2 0.05247358143351725 0.004724409448818898 0.026734024709932094 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 127684 9335 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 43.514 2 0.0524640953536215 0.004724409448818898 0.026739335455064888 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 73486 19045 MVDGTLLLL True NCI_RA007_Epitope_Rep4 973.5518046310099 973.55125496793 82.381 1 0.05246170852261773 0.004724409448818898 0.026740671862214772 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 29396 14452 FVDPNGKISL True PC9_epitope_Rep6 1088.5866099165999 1088.58550993586 67.479 2 0.05245137477037803 0.004724409448818898 0.026746458510160196 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 106484 10900 STLDGSLHAV True PC9_epitope_Rep4 998.5032742154599 998.50216993586 49.692 2 0.05244314974501801 0.004724409448818898 0.026751065125750664 ['ENSG00000178607|ENST00000433197|ERN1', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 17833 12151 EHTPSALAI True PC9_epitope_Rep5 937.4868958753299 937.48578993586 51.728 2 0.052431400878979524 0.004724409448818898 0.026757646584457267 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000566146.1_1_16:30080209-30080764:+|nuORF'] 105796 14246 SSIEHLTTL True PC9_epitope_Rep5 999.52367530687 999.52256993586 59.803 2 0.05242178512342069 0.004724409448818898 0.026763034202192917 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF', 'HUWE1|p.V474Cfs*21|1|0.25|ENSG00000086758|chrX:53627479-53627480|-/A|frameshift_variant'] 21335 14729 ERFEKTFQL True PC9_epitope_Rep5 1196.6189726740397 1196.61733490379 61.654 3 0.05242086768197529 0.004724409448818898 0.026763548286894364 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 90804 5241 RESPFSTSA True NCI_RA007_Epitope_Rep3 980.45632402304 980.45522993586 27.62 2 0.05241130040395352 0.004724409448818898 0.026768909801414813 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 109959 9524 TEHFLTAVA True H1975_Epitope_Rep2 987.5025459394699 987.50144993586 41.605 2 0.05240869258765823 0.004724409448818898 0.026770371392034465 ['ENSG00000130119|ENST00000360845|GNL3L'] 76823 11743 NRAPSLTL True PC9_epitope_Rep5 870.49231560894 870.49120993586 50.17 2 0.052401722157264394 0.004724409448818898 0.026774278428053407 ['nc|ENSG00000167695|Q8TBR7-1|TLCD3A', 'ENST00000570699.1_1_17:636236-644807:+|nuORF', 'ENSG00000167695|ENST00000308278|TLCD3A'] 25573 5499 FEKPDSVAA True H1975_Epitope_Rep3 962.4709114580198 962.46980993586 26.204 2 0.05239709775746162 0.004724409448818898 0.02677687075924874 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 6330 7882 APRPTIINA True PC9_epitope_Rep4 951.5501648382299 951.54906993586 37.747 2 0.05239281942979022 0.004724409448818898 0.02677926929096967 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 5914 15665 APGNPVLAV True PC9_epitope_Rep4 836.4756029156399 836.4745099358599 68.183 2 0.05239146351911208 0.004724409448818898 0.0267800294868003 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 90209 3573 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 18.723 2 0.052391318123316696 0.004724409448818898 0.02678011100458578 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 22327 10822 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.49727496793 46.656 1 0.052372366227752876 0.004724409448818898 0.026790738503494595 ['ENSG00000150787|ENST00000280362|PTS'] 11914 11413 DHLPNAAL True PC9_epitope_Rep1 849.43446637965 849.43336993586 48.777 2 0.05236636712997099 0.004724409448818898 0.02679410335660544 ['ENSG00000101577|ENST00000677752|LPIN2'] 76926 8683 NRDQYSHLL True PC9_epitope_Rep2 1144.56252042708 1144.56088490379 38.764 3 0.05236327578513967 0.004724409448818898 0.0267958374188937 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 115810 15241 TSDQATLLLY True H1975_Epitope_Rep2 1123.57610480255 1123.57557496793 63.782 1 0.05236320279410842 0.004724409448818898 0.02679587836377771 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 139442 21203 YLPPGFLSA True PC9_epitope_Rep5 963.50656869075 963.5060249679301 86.605 1 0.052339800696988126 0.004724409448818898 0.026809008845395006 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 11962 11812 DHNGMLSV True PC9_epitope_Rep5 871.38580193507 871.38470993586 50.431 2 0.052335131102731865 0.004724409448818898 0.02681162955856441 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 1292 7591 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 34.151 1 0.052314165023110815 0.004724409448818898 0.02682339916952146 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 32873 13598 GHSEVVAIL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 60.197 2 0.05231313513276371 0.004724409448818898 0.02682397743271007 ['ENSG00000092148|ENST00000399332|HECTD1'] 139433 20960 YLPPGFLSA True PC9_epitope_Rep2 963.50656869075 963.50546993586 86.07 2 0.05231172413563468 0.004724409448818898 0.026824769698021375 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 41507 17398 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 71.922 2 0.052307891138080966 0.004724409448818898 0.026826922006090263 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 88997 21174 QVIQSLIAL True PC9_epitope_Rep4 983.6015317047498 983.60042993586 89.61 2 0.052307141941042926 0.004724409448818898 0.026827342713949966 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 87008 15208 QMISRIEYV True PC9_epitope_Rep2 1137.58523001761 1137.5841299358601 63.76 2 0.05230635090099952 0.004724409448818898 0.02682778692496368 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 107583 21934 SVPIEIPTI True PC9_epitope_Rep1 967.5589981864299 967.5584449679301 89.185 1 0.05230488942045989 0.004724409448818898 0.02682860764129268 ['ENSG00000112996|ENST00000507110|MRPS30'] 39738 13015 HLVDEPQNLIK True PC9_epitope_Rep5 1304.7088503076 1304.7077499358602 55.069 2 0.0523025806744565 0.004724409448818898 0.026829904198147177 ['CON__P02769'] 45883 5368 ISDSEGFK True PC9_epitope_Rep3 881.4130622287299 881.41196993586 25.723 2 0.05229611885454478 0.004724409448818898 0.026833533357323885 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 39643 19395 HLPEELAEL True PC9_epitope_Rep5 1049.53932537101 1049.53822993586 79.649 2 0.05226709088302645 0.004724409448818898 0.02684984180200465 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 96380 7945 RYVPRASYF True NCI_RA007_Epitope_Rep4 1157.5981776598098 1157.59654490379 37.304 3 0.052255445417987614 0.004724409448818898 0.026856386935283028 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 53347 5350 KQQAPPPPP True NCI_RA007_Epitope_Rep4 958.5236157372198 958.52250993586 27.144 2 0.05225341730300448 0.004724409448818898 0.026857526948716088 ['ENSG00000125398|ENST00000245479|SOX9'] 96404 13025 SAAAELYL True H1975_Epitope_Rep2 836.4279840168799 836.42743496793 55.221 1 0.05224127656852688 0.004724409448818898 0.02686435222304248 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172'] 98338 11136 SEYEMSIAA True H1975_Epitope_Rep2 999.4219126602699 999.4213749679301 47.871 1 0.052234936280042395 0.004724409448818898 0.02686791722274471 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 35241 16662 GRAPVLVAL True PC9_epitope_Rep5 894.5650866263799 894.56398993586 69.095 2 0.052219650162066866 0.004724409448818898 0.02687651400314824 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000534330.1_1_11:133993775-133993928:-|nuORF', 'ENST00000532001.6_1_1:32374455-32378590:-|nuORF'] 104682 17567 SQTSATFQL True PC9_epitope_Rep3 981.4767251144499 981.47562993586 72.758 2 0.052218414699282976 0.004724409448818898 0.026877208924458044 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 9958 22608 AYNEGIINLL True PC9_epitope_Rep3 1118.5971746003 1118.5960699358602 92.23 2 0.05221122558427905 0.004724409448818898 0.026881252967119403 ['PICALM|p.A310Qfs*7|1|0.17|ENSG00000073921|chr11:86001124-86001124|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-4|PICALM', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 101839 4765 SLPHRRPHF True NCI_RA007_Epitope_Rep2 1145.6206444398902 1145.61898490379 23.165 3 0.052205403604427096 0.004724409448818898 0.02688452836468669 ['nc|ENSG00000120885|P10909-3|CLU', 'nc|ENSG00000120885|P10909-4|CLU', 'ENST00000522299.5_1_8:27457218-27472184:-|nuORF', 'nc|ENSG00000120885|P10909-6|CLU', 'ENSG00000120885|ENST00000316403|CLU', 'nc|ENSG00000120885|P10909-5|CLU', 'nc|ENSG00000120885|P10909-2|CLU'] 61982 16095 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.5007899358602 67.118 2 0.05220346792800129 0.004724409448818898 0.026885617439464975 ['ENSG00000105397|ENST00000525621|TYK2'] 5850 18335 APFLASAVSA True PC9_epitope_Rep4 932.4967322830399 932.49562993586 78.593 2 0.05219379059752697 0.004724409448818898 0.026891062815039314 ['ENSG00000146242|ENST00000369750|TPBG'] 101263 23051 SLIADLEQL True PC9_epitope_Rep3 1000.5440763982799 1000.54296993586 93.933 2 0.052180522472265095 0.004724409448818898 0.026898530316860063 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 27942 19793 FQEGDIILV True PC9_epitope_Rep6 1032.5491617787197 1032.5485749679299 88.79 1 0.05217906391608543 0.004724409448818898 0.026899351327804744 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 90983 10419 RFEEAHFTF True NCI_RA007_Epitope_Rep5 1182.5458077337796 1182.54470993586 46.704 2 0.05217636756246673 0.004724409448818898 0.026900869145333604 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF'] 96095 9570 RYMNHMQSL True PC9_epitope_Rep1 1178.5324832521 1178.5308449037902 41.669 3 0.05217506843139024 0.004724409448818898 0.026901600472942173 ['ENSG00000166233|ENST00000379887|ARIH1'] 25783 11406 FEVQVGPEA True H1975_Epitope_Rep2 974.4709114580198 974.46980993586 48.923 2 0.05217341687105339 0.004724409448818898 0.026902530221398113 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 26087 10743 FGPALSVK True PC9_epitope_Rep4 817.46978925921 817.46868993586 49.079 2 0.05216745357245341 0.004724409448818898 0.0269058875094691 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 84210 21814 PYLDSFYEY True PC9_epitope_Rep5 1195.5073565363898 1195.50677496793 88.94 1 0.05216459863030196 0.004724409448818898 0.026907494951411128 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 132171 11593 VTVPPGPSL True NCI_RA007_Epitope_Rep1 865.49091862661 865.48982993586 49.065 2 0.052156378780341794 0.004724409448818898 0.02691212352315777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 1450 7447 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 33.59 1 0.05214919990138224 0.004724409448818898 0.02691616651145065 ['ENSG00000173545|ENST00000308683|ZNF622'] 119305 8105 VAMEAVAA True H1975_Epitope_Rep2 760.3789256494799 760.3783749679301 36.125 1 0.052146510221640296 0.004724409448818898 0.026917681420757365 ['GLI2|p.V1154*|1|0.27|ENSG00000074047|chr2:120989372-120989372|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000074047|P10070-4|GLI2', 'nc|ENSG00000074047|P10070-3|GLI2', 'ENST00000452692.5_1_2:121728002-121748192:+|nuORF', 'ENST00000438299.5_1_2:121728002-121748192:+|nuORF', 'nc|ENSG00000074047|P10070-2|GLI2', 'nc|ENSG00000074047|P10070-1|GLI2'] 9102 18114 AVIKGLTYL True PC9_epitope_Rep2 976.5957180483199 976.59462993586 74.978 2 0.05213888712795063 0.004724409448818898 0.026921975394034993 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1'] 41286 17667 HVQPYIPSI True PC9_epitope_Rep5 1052.5654805492 1052.5643899358602 72.97 2 0.05213695130610712 0.004724409448818898 0.026923065910963197 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 132768 17656 VVITEKGISDL True PC9_epitope_Rep3 1172.66525416012 1172.66414993586 73.105 2 0.05213567931365109 0.004724409448818898 0.026923782490877016 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 27996 17415 FQLEHIM[Oxidation]DL True PC9_epitope_Rep6 1160.5535959166 1160.5524899358602 79.603 2 0.05212272884784327 0.004724409448818898 0.02693107913944781 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 43487 10681 IGLFGGAGVGK True H1975_Epitope_Rep3 974.5549158654998 974.55380993586 46.16 2 0.052100507544754183 0.004724409448818898 0.026943603364199792 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 2340 6698 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 30.718 2 0.05208014536220706 0.004724409448818898 0.026955084348529383 ['ENSG00000172301|ENST00000302362|COPRS'] 71410 19179 LYSSEQLLI True PC9_epitope_Rep6 1064.57537652656 1064.57426993586 86.425 2 0.05207735877464122 0.004724409448818898 0.026956655875297744 ['ENSG00000168209|ENST00000307365|DDIT4'] 28227 10655 FRIEQKTTL True PC9_epitope_Rep1 1134.63970811862 1134.63805490379 45.875 3 0.05207176445741618 0.004724409448818898 0.026959811100153344 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 24539 4050 FAGDDAPR True NCI_RA007_Epitope_Rep2 847.38243080679 847.38132993586 20.392 2 0.052069269555514136 0.004724409448818898 0.026961218344936817 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 137015 23537 YALDLSTFL True PC9_epitope_Rep2 1041.53826274185 1041.5371699358602 96.01 2 0.052068357778846774 0.004724409448818898 0.02696173264730391 ['ENSG00000137331|ENST00000259874|IER3'] 47711 19658 IYAPPLPSL True PC9_epitope_Rep6 969.55351888317 969.55242993586 88.273 2 0.05206085556534557 0.004724409448818898 0.02696596472603874 ['ENSG00000121057|ENST00000337714|AKAP1'] 72088 13416 MEYNLIQQC True NCI_RA007_Epitope_Rep3 1140.4943664078799 1140.49326993586 60.05 2 0.0520607187910591 0.004724409448818898 0.02696604188740169 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'ENST00000466513.1_1_17:57742174-57744343:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion'] 120161 3430 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 17.981 2 0.05205001818829909 0.004724409448818898 0.026972079257704194 ['ENSG00000155506|ENST00000518297|LARP1'] 99122 12659 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 54.0 2 0.052041869287047564 0.004724409448818898 0.026976677749289045 ['ENSG00000132646|ENST00000379143|PCNA'] 37114 14089 GVPTKVFNV True PC9_epitope_Rep2 959.5440168286299 959.54290993586 59.467 2 0.05203638509396323 0.004724409448818898 0.02697977291994755 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 124287 8725 VGTNEFTA True H1975_Epitope_Rep2 837.38684748089 837.3862949679301 38.522 1 0.052020795601315006 0.004724409448818898 0.02698857306168375 ['ENSG00000055163|ENST00000620254|CYFIP2', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENST00000524058.1_1_5:156810283-156816436:+|nuORF', 'ENST00000522884.5_1_5:156811334-156816436:+|nuORF'] 86482 5828 QKSLSLSPG True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50199496793 29.041 1 0.05201738684075761 0.004724409448818898 0.026990497622088182 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 91955 5018 RKNVQNINL True NCI_RA007_Epitope_Rep4 1097.63054041725 1097.62944993586 25.788 2 0.052007392186879 0.004724409448818898 0.026996141237232273 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 2274 7791 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.4390649679301 34.951 1 0.052001636990207024 0.004748100759696122 0.026999391466029758 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 21678 5521 ERSGVNSEL True PC9_epitope_Rep3 989.47778774361 989.47668993586 26.317 2 0.051999780703374625 0.004748100759696122 0.02700043987286004 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 24671 20886 FALPGLLHA True PC9_epitope_Rep1 937.5385375253701 937.53798496793 85.157 1 0.05199835068263749 0.004748100759696122 0.027001247554990376 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 87216 14767 QPITPGPSI True PC9_epitope_Rep5 908.4967322830399 908.49562993586 61.8 2 0.05197950367994655 0.004748100759696122 0.027011894450613604 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 43698 20441 IHDPSVFLL True PC9_epitope_Rep2 1039.57023157647 1039.56912993586 84.053 2 0.05197872716115369 0.004748100759696122 0.027012333196009163 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-9|USP54', 'nc|ENSG00000166348|Q70EL1-10|USP54', 'nc|ENSG00000166348|Q70EL1-8|USP54'] 133905 15603 VYIDQTMVL True NCI_RA007_Epitope_Rep5 1080.5525329069999 1080.5514299358601 66.726 2 0.05197579426417724 0.004748100759696122 0.027013990386801946 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 135118 8027 WEEGATSQTVA True H1975_Epitope_Rep2 1177.52513185885 1177.5240299358602 35.823 2 0.05197477537572664 0.004748100759696122 0.027014566116235404 ['ENSG00000161036|ENST00000292616|LRWD1'] 42333 17253 IEAFTPLLA True H1975_Epitope_Rep2 973.5484335027298 973.54788496793 71.654 1 0.051972340517385855 0.004748100759696122 0.027015941993056205 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2'] 85445 8028 QEYSEFVKA True NCI_RA007_Epitope_Rep3 1099.5185899264297 1099.51748993586 38.67 2 0.05196054127428761 0.004748100759696122 0.027022610336455047 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 89394 23383 QYAPLLAVF True PC9_epitope_Rep1 1020.5644179200399 1020.56332993586 94.724 2 0.051960421567852695 0.004748100759696122 0.02702267799611778 ['ENSG00000136261|ENST00000258761|BZW2'] 31466 5435 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.3913849679301 25.964 1 0.05195339079106541 0.004748100759696122 0.027026652150672716 ['ENSG00000131116|ENST00000300811|ZNF428'] 35223 9185 GRAPGGLSL True PC9_epitope_Rep6 826.4661008611 826.4650099358599 45.459 2 0.0519348274120353 0.0047623796938114 0.027037147639491384 ['ENSG00000171223|ENST00000302754|JUNB'] 90795 3607 RESKVVVPP True NCI_RA007_Epitope_Rep5 1009.5920296502098 1009.59092993586 19.831 2 0.05192833263817423 0.0047623796938114 0.02704082056125074 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 126910 12980 VLQSALAAIR True PC9_epitope_Rep6 1040.6342288153598 1040.63312993586 61.502 2 0.051928046999719764 0.0047623796938114 0.027040982105654598 ['ENSG00000143621|ENST00000361891|ILF2'] 35386 10673 GSDDGVLAY True H1975_Epitope_Rep3 895.3923267841499 895.39177496793 46.127 1 0.051924324826769126 0.0047623796938114 0.02704308728018209 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 122133 11911 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 50.895 1 0.051919972039027956 0.0047623796938114 0.02704554930211229 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 37564 5385 GVVPFSQRK True NCI_RA007_Epitope_Rep4 1016.5767139392398 1016.57560993586 27.28 2 0.051919811520573136 0.0047623796938114 0.027045640098332394 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 1040 6465 AEAEPPSEV True H1975_Epitope_Rep3 927.41854153199 927.4179949679301 29.839 1 0.05190075163298121 0.0047623796938114 0.02705642314214887 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 19452 6428 ELNITAAK True PC9_epitope_Rep4 858.4810822188999 858.47998993586 31.821 2 0.05188236110000222 0.0047623796938114 0.027066831154030767 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 138102 14526 YGGPVGAGI True PC9_epitope_Rep1 789.4021036222099 789.4015549679301 60.699 1 0.051880279023263955 0.0047623796938114 0.027068009718965027 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 61268 23282 LIPEYLNFI True PC9_epitope_Rep2 1120.61684741572 1120.61574993586 95.038 2 0.05186934824611364 0.0047623796938114 0.02707419786826506 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 60586 9191 LHGPSGSAF True PC9_epitope_Rep3 871.4188163155101 871.41770993586 40.291 2 0.05186091950743375 0.0047623796938114 0.027078970425197964 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 89454 18884 QYESKVFYL True PC9_epitope_Rep1 1175.5862755634298 1175.5851699358602 77.422 2 0.05186062188825763 0.0047623796938114 0.027079138958197375 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 76802 5212 NRAPNTAEL True PC9_epitope_Rep2 984.4988575413599 984.49776993586 25.438 2 0.051858476617773264 0.0047623796938114 0.02708035378968146 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 4967 13260 ALGPILRL True H1975_Epitope_Rep2 851.55927296995 851.55816993586 56.133 2 0.05185135545667382 0.0047623796938114 0.027084386736553875 ['ENSG00000135953|ENST00000258436|MFSD9'] 72845 5839 MPNGTPHPTA True PC9_epitope_Rep1 1021.46511488493 1021.46400993586 27.274 2 0.0518408501005801 0.0047623796938114 0.02709033724663907 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 1743 11568 AEGPVAVVV True NCI_RA007_Epitope_Rep4 839.4752685624699 839.47472496793 51.444 1 0.05184038361150654 0.0047623796938114 0.027090601505488046 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 28955 12598 FTDTEGLPY True H1975_Epitope_Rep2 1041.4654917244097 1041.46497496793 53.556 1 0.05183838930445815 0.0047623796938114 0.027091731275650007 ['ENSG00000102554|ENST00000377687|KLF5', 'nc|ENSG00000102554|Q13887-4|KLF5'] 32870 8229 GHSEAVISV True PC9_epitope_Rep4 897.45559574705 897.45448993586 39.115 2 0.051833534447521444 0.0047623796938114 0.027094481716962802 ['ENSG00000073536|ENST00000442241|NLE1', 'ENST00000593176.1_1_17:33464206-33469153:-|nuORF'] 107890 12953 SVVPDVRSV True PC9_epitope_Rep5 956.52909504048 956.52798993586 54.833 2 0.05182639780350172 0.0047623796938114 0.02709852532241721 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 54724 14790 KYMDVQFDF True NCI_RA007_Epitope_Rep2 1191.52704643515 1191.5259499358601 62.206 2 0.05182591315578762 0.0047623796938114 0.02709879994226233 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 126231 4586 VLGPTPVQK True NCI_RA007_Epitope_Rep3 937.55966689277 937.55856993586 24.933 2 0.05182480403169334 0.0047623796938114 0.02709942842358229 ['ENSG00000166225|ENST00000549921|FRS2'] 1220 8075 AEDDLNTVAA True H1975_Epitope_Rep3 1017.46146897313 1017.46036993586 36.034 2 0.05180239139063041 0.0047623796938114 0.027112131267923507 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 120372 5005 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 24.336 2 0.051801157616399286 0.0047623796938114 0.02711283069081029 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 87399 9535 QPVSGTQVV True PC9_epitope_Rep3 913.48689587533 913.48578993586 41.622 2 0.05179530950125989 0.0047623796938114 0.027116146189577674 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 35805 12295 GTITDDVRV True PC9_epitope_Rep3 974.50327421546 974.50216993586 52.319 2 0.05179200569942205 0.0047623796938114 0.02711801938970906 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 54462 12080 KYGNLSNFL True NCI_RA007_Epitope_Rep3 1054.54474510462 1054.54364993586 54.637 2 0.05177069379537713 0.0047623796938114 0.02713010566785597 ['nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4'] 103498 6630 SPQQPGLSA True PC9_epitope_Rep6 883.4399456829099 883.43884993586 34.219 2 0.05176319840059672 0.0047623796938114 0.027134357557942145 ['ENSG00000170498|ENST00000367194|KISS1'] 115316 11690 TRHPFLTSL True PC9_epitope_Rep4 1070.58727862294 1070.5861899358601 52.728 2 0.0517324875077445 0.0047623796938114 0.027151785069308373 ['nc|ENSG00000117020|Q9Y243-2|AKT3', 'ENSG00000117020|ENST00000673466|AKT3'] 35185 10495 GRADGYVL True PC9_epitope_Rep1 849.43446637965 849.43336993586 45.258 2 0.05172628436941312 0.0047623796938114 0.02715530638154037 ['ENSG00000142937|ENST00000396651|RPS8'] 98324 15060 SEWDGIVTV True NCI_RA007_Epitope_Rep3 1004.4814761417199 1004.48097496793 66.712 1 0.05170572262583999 0.0047623796938114 0.027166981515280898 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 77094 12487 NRLPDGMAV True PC9_epitope_Rep5 971.48585032951 971.48474993586 53.03 2 0.051702438983802265 0.0047623796938114 0.027168846411660064 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 71697 12730 MEDSPDLLAA True H1975_Epitope_Rep3 1060.47467650912 1060.47417496793 54.177 1 0.05170011975578533 0.0047623796938114 0.027170163652335114 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000462436.1_1_7:97484616-97487685:-|nuORF'] 27806 10060 FQDDPHAGL True PC9_epitope_Rep1 998.4457593393398 998.44466993586 43.566 2 0.05169760930776529 0.0047623796938114 0.027171589563791287 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 40872 15148 HSEVVAIL True PC9_epitope_Rep5 866.4861675993399 866.48506993586 63.274 2 0.051695081455758164 0.0047623796938114 0.02717302542829123 ['ENSG00000092148|ENST00000399332|HECTD1'] 98954 7509 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.4710349679301 33.834 1 0.05168940031646723 0.0047623796938114 0.027176252663608843 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 106186 8161 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 36.341 2 0.05168094971218278 0.0047623796938114 0.027181053760031222 ['ENSG00000114315|ENST00000232424|HES1'] 128708 13149 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 55.443 2 0.05168058128604506 0.0047623796938114 0.02718126309363838 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 92772 12324 RPADVIFAT True PC9_epitope_Rep6 988.5341804209199 988.53308993586 58.801 2 0.05166023099232749 0.0047623796938114 0.02719282803552856 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 55548 12925 LAGPVVEI True H1975_Epitope_Rep3 796.4694549060399 796.46890496793 54.944 1 0.05165950528814362 0.0047623796938114 0.027193240529964018 ['ENSG00000197403|ENST00000641846|OR6N1'] 17286 14237 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 62.668 2 0.05165720294695195 0.0047623796938114 0.027194549231050427 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 29775 17779 FVPEIFHRI True PC9_epitope_Rep2 1156.6393141958 1156.63765490379 73.675 3 0.051652917973280914 0.0047623796938114 0.027196985054014834 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 71427 18401 LYTEKFEEF True PC9_epitope_Rep1 1204.5652057656796 1204.56467496793 75.57 1 0.051650392393472105 0.0047623796938114 0.027198420828893607 ['ENSG00000084652|ENST00000373610|TXLNA'] 111581 21898 TIDDGIFEV True PC9_epitope_Rep1 1007.48114178855 1007.48004993586 89.044 2 0.051637150881469814 0.0047623796938114 0.02720594964930888 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 60585 9111 LHGPSGSAF True PC9_epitope_Rep1 871.4188163155101 871.41770993586 39.897 2 0.05163695103286353 0.0047623796938114 0.027206063292947426 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 47210 13559 IVAPGKGILAA True PC9_epitope_Rep2 1008.6331661861998 1008.63206993586 57.447 2 0.051627681217294275 0.0047623796938114 0.02721133502829397 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 62953 9852 LLPGKTYSF True NCI_RA007_Epitope_Rep3 1024.5593325395998 1024.55822993586 45.826 2 0.05160872330296127 0.0047623796938114 0.02722211922547166 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 44537 8795 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 43.731 3 0.05159188996631916 0.0047623796938114 0.02723169806651794 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 44566 20096 ILPEELQTL True PC9_epitope_Rep4 1054.5910265907 1054.58992993586 85.431 2 0.0515896957267134 0.0047623796938114 0.027232946898897284 ['ENSG00000198315|ENST00000330236|ZKSCAN8', 'nc|ENSG00000198315|Q15776-2|ZKSCAN8'] 8102 14756 ATDYTFAMY True H1975_Epitope_Rep1 1081.44264810485 1081.44207496793 61.982 1 0.05156482752503881 0.0047623796938114 0.02724710400489899 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 76843 19335 NRDDIGIIL True PC9_epitope_Rep5 1027.56620882519 1027.5651099358602 79.416 2 0.051561625693997186 0.0047623796938114 0.027248927239688733 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 34683 9083 GQDGQLKGF True PC9_epitope_Rep5 948.4664947839199 948.46538993586 39.884 2 0.051561211231297754 0.0047623796938114 0.027249163257260147 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 5841 16028 APFGGFKMS True PC9_epitope_Rep1 940.4476739156399 940.44656993586 66.464 2 0.051539270585266944 0.0047623796938114 0.027261660066892224 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 37516 10409 GVVDPVHGV True PC9_epitope_Rep2 877.46576650793 877.46466993586 45.36 2 0.05152503832178374 0.0047623796938114 0.027269769130750354 ['ENSG00000261150|ENST00000615648|EPPK1'] 5705 22163 APALLLIPA True PC9_epitope_Rep5 877.56368964405 877.56258993586 90.287 2 0.0515211480343191 0.0047623796938114 0.027271986061269918 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 85216 12735 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 54.088 2 0.051512834625612895 0.0047623796938114 0.027276724105502487 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 1117 5056 AEAPASPAP True H1975_Epitope_Rep3 809.3919328613299 809.3913849679301 24.57 1 0.05150531277210415 0.0047623796938114 0.02728101165547829 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 47688 15408 IYADNQVMHF True PC9_epitope_Rep6 1236.55974354576 1236.55864993586 71.422 2 0.051505282602372984 0.0047623796938114 0.027281028853815118 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 26198 21267 FHDHALMIIF True PC9_epitope_Rep3 1242.6219498795 1242.62029490379 87.097 3 0.051500143594816264 0.0047623796938114 0.02728395850065274 ['ENSG00000198712|ENST00000361739|MT-CO2'] 128520 6925 VPSSPLRAA True PC9_epitope_Rep4 896.50796567308 896.50686993586 33.866 2 0.051497488637685586 0.0047623796938114 0.02728547214971208 ['ENST00000372409.7_1_20:44563346-44566100:+|nuORF'] 23717 22766 EYFESPFTI True PC9_epitope_Rep3 1131.5124419168299 1131.5113499358602 92.838 2 0.05149525622713377 0.0047623796938114 0.02728674495393363 ['ENSG00000198938|ENST00000362079|MT-CO3'] 74812 9113 NHDTGEYVL True PC9_epitope_Rep6 1046.46688870674 1046.4657899358601 45.146 2 0.051494451005974405 0.0047623796938114 0.02728720406214599 ['ENSG00000144597|ENST00000396842|EAF1'] 142622 14354 YYNGKWEFL True NCI_RA007_Epitope_Rep5 1218.5709598524597 1218.5698699358602 61.897 2 0.05148968004545029 0.0047623796938114 0.027289924434561214 ['ENSG00000144843|ENST00000357003|ADPRH'] 18840 11944 ELDPNNAVYY True H1975_Epitope_Rep1 1196.53496826656 1196.5338699358601 50.947 2 0.05148704584379989 0.0047623796938114 0.02729142654423854 ['ENSG00000197860|ENST00000381007|SGTB'] 31577 12506 GEELSPPLP True H1975_Epitope_Rep1 937.4756624852898 937.47511496793 53.145 1 0.05148581654989491 0.0047623796938114 0.02729212755397844 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 57358 13341 LEAHFVPLV True H1975_Epitope_Rep3 1023.5753169569099 1023.57420993586 56.578 2 0.05148494509824175 0.0047623796938114 0.027292624512517266 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 73425 22553 MTVDDLLSL True PC9_epitope_Rep4 1005.5052483614099 1005.50414993586 94.988 2 0.05146758174554394 0.0047623796938114 0.027302527917360084 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 4063 12251 AHLDATTVL True PC9_epitope_Rep4 939.5025459394701 939.50144993586 54.94 2 0.05146359208097296 0.0047623796938114 0.027304803926906537 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 91936 4635 RKMAQAVTL True NCI_RA007_Epitope_Rep5 1016.5800850675199 1016.57898993586 24.506 2 0.05145302793991673 0.0047623796938114 0.027310831340765795 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'ENST00000488127.1_1_1:25880414-25890333:+|nuORF'] 88129 9580 QRSDGPYAL True PC9_epitope_Rep5 1005.4879585044899 1005.48686993586 41.811 2 0.05144549298670836 0.0047623796938114 0.027315131167008563 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 98174 10421 SESVPVIAA True H1975_Epitope_Rep2 871.46509780159 871.46400993586 45.097 2 0.05142372452082568 0.0047623796938114 0.02732755676239667 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 105452 10973 SRVDGVVL True PC9_epitope_Rep2 843.48141657207 843.48030993586 47.531 2 0.051391796740912876 0.0047623796938114 0.027345790521488087 ['ENSG00000134247|ENST00000393203|PTGFRN', 'ENST00000496699.1_1_1:117509714-117517097:+|nuORF'] 78323 13262 NYISGIQTI True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52817496793 58.146 1 0.051391616216509374 0.0047623796938114 0.02734589364882699 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 29349 18241 FVDGSAIQV True PC9_epitope_Rep3 934.47599683846 934.47544496793 75.375 1 0.051381684286986945 0.0047623796938114 0.02735156795272655 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 111279 11246 THLLNQDTL True PC9_epitope_Rep4 1053.54547338061 1053.54436993586 51.032 2 0.05137319786330211 0.0047623796938114 0.02735641724624677 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 41018 11871 HTGPVFTV True PC9_epitope_Rep2 856.44430278736 856.44320993586 50.987 2 0.0513519542396289 0.0047623796938114 0.02736855960596893 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 140309 11519 YRDETLSGSEL True PC9_epitope_Rep2 1268.5884603913998 1268.5873699358601 49.634 2 0.051345016005607445 0.0047623796938114 0.027372526383779634 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 136281 11186 WSENTSLNY True H1975_Epitope_Rep2 1112.47745339044 1112.47634993586 48.065 2 0.05134082549801879 0.0047623796938114 0.027374922460671126 ['ENSG00000132423|ENST00000254759|COQ3'] 32036 13007 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.49187496793 55.148 1 0.051339194628377285 0.0047623796938114 0.027375855021146697 ['ENSG00000051523|ENST00000261623|CYBA'] 108637 11026 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59198993586 47.403 2 0.05131004818654912 0.0047623796938114 0.02739252627517168 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 9556 7263 AWAPKPYHKF True PC9_epitope_Rep4 1243.6502132326698 1243.64857490379 35.249 3 0.05130508138283826 0.0047623796938114 0.027395368105975405 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 27928 20189 FQEEVVAVL True PC9_epitope_Rep4 1032.5491617787197 1032.5480699358602 85.794 2 0.05130225875864971 0.0047623796938114 0.027396983230095703 ['ENSG00000163918|ENST00000296273|RFC4', 'nc|ENSG00000163918|P35249-2|RFC4', 'ENST00000494047.5_1_3:186509405-186522502:-|nuORF'] 120159 3290 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 17.295 2 0.051300153428660865 0.0047623796938114 0.027398187969254927 ['ENSG00000155506|ENST00000518297|LARP1'] 125981 13716 VLDPNTVFA True H1975_Epitope_Rep1 974.50729696674 974.5067449679301 57.897 1 0.05127900670281029 0.0047623796938114 0.027410291452750795 ['CON__P34955'] 97755 4093 SEIRAIRQA True NCI_RA007_Epitope_Rep4 1042.5883412521 1042.5872499358602 22.02 2 0.05124333011252089 0.0047623796938114 0.02743072205901487 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 124736 17466 VHAPPMQLGF True PC9_epitope_Rep4 1095.5535359665098 1095.5524299358601 75.18 2 0.05124199188053795 0.0047623796938114 0.027431488677965382 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 85711 8819 QHADPPVQI True PC9_epitope_Rep4 1003.50869394907 1003.50758993586 41.453 2 0.05124003172969022 0.0047623796938114 0.02743261160368088 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 58203 13117 LELDTNLPA True H1975_Epitope_Rep2 984.51277627 984.51222496793 55.575 1 0.051239996049576055 0.0047623796938114 0.027432632044385778 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 78000 20161 NVPEGLLATV True PC9_epitope_Rep4 1011.56006081559 1011.5594749679301 85.687 1 0.051232251584437255 0.0047623796938114 0.02743706907718781 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 31702 9388 GEGDLSISA True H1975_Epitope_Rep2 847.39232678415 847.39177496793 41.073 1 0.05122585348275391 0.0047623796938114 0.027440735223103044 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1', 'ENST00000526890.5_1_11:3039642-3048038:-|nuORF'] 141878 20704 YVDPVITSI True PC9_epitope_Rep5 1005.53826274185 1005.53716993586 84.695 2 0.051225710294539206 0.0047623796938114 0.02744081727571866 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 33975 6022 GLSQSALPYRR True NCI_RA007_Epitope_Rep5 1246.6782188856598 1246.6765649037902 29.847 3 0.051192810656648505 0.004776475856407195 0.027459675915955897 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 103978 22082 SQAPFIVAL True PC9_epitope_Rep5 944.5331177917599 944.53202993586 89.968 2 0.05118264799425158 0.004776475856407195 0.027465503673777442 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 141716 15164 YTVPGTEGV True PC9_epitope_Rep5 921.4443623570099 921.44326993586 63.335 2 0.05118173784747286 0.004776475856407195 0.027466025649571235 ['ENST00000554757.1_1_14:104198706-104199352:+|nuORF', 'ENSG00000100711|ENST00000311141|ZFYVE21', 'ENST00000555501.1_1_14:104193911-104199352:+|nuORF', 'nc|ENSG00000100711|Q9BQ24-2|ZFYVE21'] 12610 10727 DLAGSIIGK True NCI_RA007_Epitope_Rep1 872.4967322830399 872.49562993586 45.717 2 0.051164433585627514 0.004776475856407195 0.027475951458552444 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 10000 20855 AYPYNFSNL True PC9_epitope_Rep3 1087.49746055903 1087.49636993586 85.492 2 0.051161643860496805 0.004776475856407195 0.027477551958918604 ['ENSG00000174282|ENST00000380599|ZBTB4'] 96831 15823 SASDWYDAL True NCI_RA007_Epitope_Rep3 1026.4294405688597 1026.42834993586 69.872 2 0.05115780733064698 0.004776475856407195 0.027479753160567062 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 137594 7299 YEERVQAVV True H1975_Epitope_Rep2 1091.56112344475 1091.56002993586 33.013 2 0.05115439292185999 0.004776475856407195 0.027481712303771028 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 138336 8309 YHEGSAPAL True PC9_epitope_Rep3 943.4399456829099 943.43884993586 36.933 2 0.051153282024496934 0.004776475856407195 0.027482349749128394 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 2245 11510 AENNWIEEA True H1975_Epitope_Rep1 1074.4618033263 1074.4607099358602 49.259 2 0.05115132310271086 0.004776475856407195 0.027483473832640087 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1', 'nc|ENSG00000119661|Q4LDG9-2|DNAL1'] 106934 8285 SVDSHFQEV True PC9_epitope_Rep6 1046.4668887067398 1046.4657899358601 41.481 2 0.051148121575146595 0.004776475856407195 0.027485311046288936 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 32026 7562 GEQTLHYIA True H1975_Epitope_Rep2 1030.5083595958997 1030.5072699358602 34.04 2 0.05113629054195721 0.004776475856407195 0.027492101301205562 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 21755 13163 ERTSFNYAM True PC9_epitope_Rep1 1117.4862442523297 1117.4851499358601 55.497 2 0.05113475143555824 0.004776475856407195 0.027492984759984084 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 115405 15541 TRLPALTV True PC9_epitope_Rep5 869.5334521449299 869.53234993586 64.788 2 0.05112691320690832 0.004776475856407195 0.02749748435696981 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 96521 11322 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44962496793 48.599 1 0.051125702862517435 0.004776475856407195 0.027498179223443546 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 7971 7863 ATDDSLHQL True PC9_epitope_Rep4 998.4668887067401 998.46578993586 37.665 2 0.051121253111619205 0.004776475856407195 0.027500733989026426 ['ENSG00000104549|ENST00000265896|SQLE'] 60851 14651 LHVPGPMAV True PC9_epitope_Rep4 919.49495846123 919.49386993586 64.287 2 0.05111550548219283 0.004776475856407195 0.02750403422872167 ['ENSG00000102243|ENST00000370634|VGLL1'] 99139 13972 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 58.817 2 0.05111098132643816 0.004776475856407195 0.027506632209536617 ['ENSG00000132646|ENST00000379143|PCNA'] 2814 7316 AEVDAAMAA True H1975_Epitope_Rep1 847.3745685450299 847.3740149679301 33.148 1 0.05110443322883372 0.004776475856407195 0.02751039282086099 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 110095 13679 TEMDPVIIA True H1975_Epitope_Rep2 987.4946836777099 987.49358993586 57.757 2 0.05109865501349262 0.004776475856407195 0.027513711666299942 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 5417 10085 ALTGHLEEV True PC9_epitope_Rep4 967.49746055903 967.49636993586 46.464 2 0.051092552078143824 0.004776475856407195 0.027517217410838395 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 54635 9822 KYLEHPLLL True NCI_RA007_Epitope_Rep3 1124.65938093404 1124.65828993586 45.709 2 0.05108514237954743 0.004776475856407195 0.02752147434416275 ['ENSG00000114999|ENST00000233336|TTL'] 71133 21099 LYLPSFFTY True NCI_RA007_Epitope_Rep5 1149.57464825057 1149.57354993586 88.176 2 0.051084120647464995 0.004776475856407195 0.027522061383945123 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 40118 19295 HPYLFPVAA True PC9_epitope_Rep1 1013.5334521449298 1013.53234993586 79.023 2 0.05107013497877514 0.004776475856407195 0.02753009802567662 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 11748 10514 DHATTALL True PC9_epitope_Rep2 840.43413202648 840.43302993586 45.764 2 0.05106187806994258 0.004776475856407195 0.02753484371245636 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 109874 7411 TEETATTVVAA True H1975_Epitope_Rep2 1091.5346339133898 1091.53352993586 33.449 2 0.051055173159780094 0.004776475856407195 0.02753869792111977 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 10093 18886 AYTPFHAVL True PC9_epitope_Rep3 1017.5283667644899 1017.52726993586 77.868 2 0.05105495798449476 0.004776475856407195 0.02753882161912938 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 35918 6005 GTSEFITGK True NCI_RA007_Epitope_Rep4 938.4709114580198 938.46980993586 29.717 2 0.051047917825553256 0.004776475856407195 0.027542869075832706 ['ENSG00000110002|ENST00000456829|VWA5A', 'VWA5A|p.R449S|1|0.19|ENSG00000110002|chr11:124135022-124135022|G/C|missense_variant'] 40091 8920 HPVLLTEA True PC9_epitope_Rep6 878.4861675993401 878.48561496793 44.284 1 0.0510201742145197 0.004776475856407195 0.027558824332471563 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 17434 5535 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51766490379 26.682 3 0.05101392796115876 0.004776475856407195 0.027562417671761943 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 63685 13278 LMVDHVTEV True PC9_epitope_Rep2 1041.51648175145 1041.5153899358602 56.351 2 0.050972252903817385 0.004776475856407195 0.027586403192101393 ['ENST00000602875.5_1_5:139930287-139937028:-|nuORF', 'ENSG00000213523|ENST00000336283|SRA1'] 133672 22073 VYAPPVGGFSF True PC9_epitope_Rep1 1139.56514619603 1139.56457496793 89.713 1 0.050952406951154786 0.004776475856407195 0.027597831825310146 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 137858 9233 YESSTASALVA True H1975_Epitope_Rep3 1097.52406922969 1097.5229699358601 40.506 2 0.05094295271273252 0.004776475856407195 0.027603277700281606 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 47229 18045 IVAPGTFEV True PC9_epitope_Rep6 931.5014833103099 931.5009349679301 82.041 1 0.05093787062492776 0.004776475856407195 0.027606205505651182 ['ENSG00000143621|ENST00000361891|ILF2'] 45115 20081 IPLQDLVAA True PC9_epitope_Rep4 938.5436824754598 938.54258993586 85.374 2 0.05093392986562166 0.004776475856407195 0.027608475979591988 ['ENSG00000170892|ENST00000396388|TSEN34', 'TSEN34|p.D267Y|1|0.38|ENSG00000170892|chr19:54193228-54193228|G/T|missense_variant'] 23763 21554 EYGPIHILW True PC9_epitope_Rep3 1126.5811306133398 1126.58002993586 88.202 2 0.05092711074478195 0.004776475856407195 0.027612405220090803 ['ENSG00000162627|ENST00000306121|SNX7', 'nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7'] 54055 14805 KVIEGLDTGL True PC9_epitope_Rep4 1043.5862755634298 1043.5851699358602 64.886 2 0.050908511065690075 0.004776475856407195 0.027623125069984326 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 17754 13796 EHSGPPIVI True PC9_epitope_Rep1 947.5076313199099 947.50652993586 57.911 2 0.05090807086468393 0.004776475856407195 0.027623378823138884 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 2240 6064 AENGSSLPSA True H1975_Epitope_Rep3 931.4246895415899 931.42358993586 28.336 2 0.05089828851469112 0.004776475856407195 0.02762901838086933 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.G420Vfs*5|1|0.43|ENSG00000145375|chr4:122935824-122935824|G/-|frameshift_variant'] 67971 13547 LTDEGLLY True H1975_Epitope_Rep2 922.46476344842 922.46421496793 57.245 1 0.05089189989762426 0.004776475856407195 0.027632701995957767 ['nc|ENSG00000136144|Q8NDN9-2|RCBTB1', 'ENSG00000136144|ENST00000378302|RCBTB1'] 76695 17065 NQSGQVFGL True PC9_epitope_Rep6 948.4664947839199 948.46538993586 78.205 2 0.05088771272148567 0.004776475856407195 0.02763511651967429 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 120176 4960 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 24.162 2 0.050886241559133794 0.004776475856407195 0.027635964906230954 ['ENSG00000155506|ENST00000518297|LARP1'] 109987 5089 TEIGSIHSA True NCI_RA007_Epitope_Rep5 913.45051036661 913.44940993586 26.273 2 0.05087534569138656 0.004776475856407195 0.02764224903558674 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 128090 21859 VPLEFPVVA True PC9_epitope_Rep3 969.5535188831699 969.55242993586 89.383 2 0.05086023709790465 0.004776475856407195 0.027650964944982193 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 8899 16919 AVFPSIVGR True PC9_epitope_Rep3 944.5443511817999 944.54324993586 70.237 2 0.05083892576710148 0.004776475856407195 0.02766326329406888 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 26152 21028 FGYVDFESA True PC9_epitope_Rep5 1033.4392769765698 1033.43877496793 85.941 1 0.05082084534119256 0.004776475856407195 0.02767370098672141 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 139441 21260 YLPPGFLSA True PC9_epitope_Rep5 963.50656869075 963.50546993586 86.827 2 0.05081862911417879 0.004776475856407195 0.027674980640020518 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 8374 15690 ATLNIIHSV True PC9_epitope_Rep5 966.5498304850599 966.54872993586 65.361 2 0.05081619220019785 0.004776475856407195 0.027676387779432977 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 58489 7555 LEQDHFQVA True H1975_Epitope_Rep2 1085.5141732523298 1085.5130699358601 34.014 2 0.05079649097333355 0.004776475856407195 0.027687766145121633 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 103374 3262 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 16.581 2 0.050788406274956455 0.004776475856407195 0.027692436641027388 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 71252 17806 LYPQFMFHL True NCI_RA007_Epitope_Rep1 1194.5895871220598 1194.58848993586 73.398 2 0.05078463026303535 0.004776475856407195 0.027694618268407814 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 55304 7916 LAEAALELREE True H1975_Epitope_Rep3 1242.6455813446998 1242.64448993586 35.418 2 0.050776365911776755 0.004776475856407195 0.027699393613467523 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 48892 12752 KEDDLFAIA True H1975_Epitope_Rep2 1020.5127762699999 1020.51166993586 54.153 2 0.05077467014097857 0.004776475856407195 0.027700373562497334 ['nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C'] 49939 17453 KILPTLEAV True PC9_epitope_Rep2 982.60628273202 982.60518993586 72.385 2 0.05076770479062462 0.004776475856407195 0.02770439901200318 ['ENSG00000143621|ENST00000361891|ILF2'] 16877 7044 EFHLNESGD True H1975_Epitope_Rep3 1046.43050319802 1046.4294099358601 32.059 2 0.05076614770108403 0.004776475856407195 0.027705298964371197 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 43705 6541 IHDSQAPSL True PC9_epitope_Rep4 966.47705946762 966.47596993586 32.287 2 0.0507646942575201 0.004776475856407195 0.02770613903597243 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 96560 9450 SAEQVIAGFNR True H1975_Epitope_Rep1 1190.6043852390599 1190.6032899358602 41.266 2 0.05076325150266825 0.004776475856407195 0.027706972952160656 ['ENSG00000143256|ENST00000368010|PFDN2'] 84995 12555 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 56.625 2 0.05075601245640152 0.004776475856407195 0.027711157479191905 ['ENSG00000113369|ENST00000265138|ARRDC3'] 88557 8013 QTDGTLTY True H1975_Epitope_Rep3 897.40797684829 897.4074249679301 35.795 1 0.05073968293887818 0.004776475856407195 0.027720598823508018 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'ATP11C|p.T977Lfs*10|1|0.31|ENSG00000101974|chrX:139745767-139745767|C/-|frameshift_variant'] 90186 3286 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 17.277 2 0.05073380150042277 0.004776475856407195 0.027724000037777623 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 117038 6540 TVIAKVNNV True PC9_epitope_Rep6 956.5654805492 956.56438993586 33.831 2 0.05073249126230775 0.004776475856407195 0.027724757794485574 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 118904 6558 VADKVHLM[Oxidation]Y True H1975_Epitope_Rep1 1090.54811661334 1090.5470099358602 30.283 2 0.050722881202417434 0.004776475856407195 0.02773031619554935 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 106918 7474 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4499749679298 33.696 1 0.05071724250013272 0.004776475856407195 0.027733578050933967 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 101169 9793 SLGSVQAPSY True NCI_RA007_Epitope_Rep3 1007.4923751785898 1007.49126993586 45.584 2 0.050716857601362714 0.004776475856407195 0.02773380071823932 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF', 'ENST00000453838.2_1_1:182929095-182929497:-|nuORF'] 49882 18593 KIFSGVFVKV True PC9_epitope_Rep5 1122.68011637862 1122.67846490379 76.542 3 0.050709919099978275 0.004776475856407195 0.02773781497609379 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 64711 20469 LPWAPAGVAA True PC9_epitope_Rep1 951.5178020807898 951.5172549679301 83.546 1 0.050706518748771544 0.004776475856407195 0.027739782432998503 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 99370 13983 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep4 1277.7343370957499 1277.7332299358602 61.691 2 0.0507043781219456 0.004776475856407195 0.027741021072293582 ['ENSG00000100632|ENST00000557016|ERH'] 113999 9740 TPAPHSPWTA True PC9_epitope_Rep4 1063.50869394907 1063.50758993586 45.102 2 0.05069411949476424 0.004776475856407195 0.02774695774826451 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 7526 8958 ASDRNIVLY True H1975_Epitope_Rep2 1049.5505587610498 1049.54997496793 39.412 1 0.050691497568495426 0.004776475856407195 0.027748475241375123 ['ENSG00000164934|ENST00000612750|DCAF13'] 130813 20202 VTAPSGILDV True PC9_epitope_Rep2 970.53351171458 970.53240993586 83.122 2 0.05066851944377614 0.004776475856407195 0.02776177747259705 ['ENSG00000162063|ENST00000397066|CCNF'] 76473 9306 NQGPHSPIL True PC9_epitope_Rep1 961.4981292653699 961.49702993586 40.651 2 0.05066464026284546 0.004776475856407195 0.02776402372566215 ['ENSG00000100147|ENST00000255784|CCDC134'] 64861 16319 LQDQNTYTL True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 67.908 2 0.05065028782235482 0.004776475856407195 0.027772335968341434 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 27433 24462 FLYPFPLAL True PC9_epitope_Rep1 1079.60555445603 1079.6044499358602 98.935 2 0.050642762991778056 0.004776475856407195 0.027776694876838978 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 132060 5876 VTTGGMVLK True NCI_RA007_Epitope_Rep3 904.5051887917599 904.50408993586 30.09 2 0.050630480126370905 0.004776475856407195 0.02778381128592107 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 118546 20010 TYQQLFYLL True NCI_RA007_Epitope_Rep3 1187.6226610721499 1187.6215699358602 87.204 2 0.05062629149588497 0.004776475856407195 0.02778623845448334 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'IQGAP2|p.L938Ffs*10|1|0.08|ENSG00000145703|chr5:76668813-76668813|C/-|frameshift_variant', 'IQGAP2|p.P1231Lfs*7|1|0.14|ENSG00000145703|chr5:76683143-76683143|C/-|frameshift_variant', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 103986 19433 SQATDFGEALV True PC9_epitope_Rep4 1136.5349682665599 1136.5338699358601 82.862 2 0.05061392866844242 0.004776475856407195 0.02779340339675821 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 111154 20063 THFSFPLRL True PC9_epitope_Rep1 1116.60801406752 1116.6069099358601 81.998 2 0.050613583036621196 0.004776475856407195 0.027793603733242595 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 140014 5363 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54488490379 25.643 3 0.05061033190967051 0.004776475856407195 0.02779548822748716 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 124986 9320 VHVSGSPTAL True PC9_epitope_Rep1 966.51344497634 966.51234993586 40.705 2 0.05058544158638649 0.004776475856407195 0.027809919523392818 ['ENSG00000198218|ENST00000395443|QRICH1'] 1266 12520 AEDINYVVP True H1975_Epitope_Rep2 1018.49712620586 1018.49602993586 53.252 2 0.05057815689611058 0.004776475856407195 0.02781414442019186 ['KIAA0232|p.G888Dfs*33|1|0.26|ENSG00000170871|chr4:6863043-6863043|G/-|frameshift_variant', 'ENSG00000170871|ENST00000307659|KIAA0232'] 115231 7239 TREAGSALL True PC9_epitope_Rep4 916.4977949121999 916.49668993586 35.149 2 0.05056711612216448 0.004776475856407195 0.027820548823840982 ['ENSG00000145386|ENST00000274026|CCNA2'] 106857 16130 SVATELNAV True PC9_epitope_Rep1 902.4709114580199 902.46980993586 66.86 2 0.05055537500255441 0.004776475856407195 0.02782736092183249 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.W1179Cfs*25|1|0.06|ENSG00000003393|chr2:201723411-201723423|ATCTTGCCACATT/-|frameshift_variant', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF', 'nc|ENSG00000003393|Q96Q42-2|ALS2', 'nc|ENSG00000003393|Q96Q42-3|ALS2', 'ENST00000482789.5_1_2:202606311-202633608:-|nuORF'] 35317 11195 GRPGQLSL True PC9_epitope_Rep3 826.4661008611 826.4650099358599 48.066 2 0.05055503093336533 0.004776475856407195 0.02782756057033781 ['ENST00000609803.2_1_12:46121133-46121556:-|nuORF'] 35937 2805 GTSSVIVSR True NCI_RA007_Epitope_Rep1 904.4977949122 904.49668993586 14.756 2 0.050554061263932915 0.004776475856407195 0.027828123234559965 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 132480 15377 VVDGNFEEV True PC9_epitope_Rep2 1006.46074069714 1006.4596499358599 64.43 2 0.05054796324961268 0.004776475856407195 0.027831661925515262 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 70774 13807 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.55477496793 58.128 1 0.050541754427813244 0.004776475856407195 0.027835265331468774 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 141593 14674 YTRELLLEL True NCI_RA007_Epitope_Rep3 1148.6441247927198 1148.64302993586 65.099 2 0.050539798164671176 0.004776475856407195 0.027836400771779363 ['ENSG00000129925|ENST00000431232|PGAP6'] 24706 20796 FAMEIDPSL True PC9_epitope_Rep4 1021.4790336135699 1021.47792993586 88.14 2 0.050518505639271544 0.004776475856407195 0.02784876190493139 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 32099 10413 GETEDTFIA True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 45.068 1 0.05050823189474279 0.004776475856407195 0.027854727964580533 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 87179 16022 QPHDPLVPLSA True PC9_epitope_Rep1 1172.61897267404 1172.6178699358602 66.442 2 0.05047811154355361 0.004776475856407195 0.027872225717897398 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'ENST00000479519.5_1_3:13393312-13395748:-|nuORF'] 74992 7396 NHQGTYVL True PC9_epitope_Rep4 930.4559301002199 930.45482993586 35.796 2 0.05046468992671289 0.004776475856407195 0.02788002587296003 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 100939 8251 SLFGSPVAK True NCI_RA007_Epitope_Rep3 904.50181766348 904.50072993586 39.586 2 0.050432926894544844 0.004776475856407195 0.027898493161337252 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 23743 21537 EYGFYHDFF True PC9_epitope_Rep5 1223.4923751785898 1223.4912699358601 87.878 2 0.05043098985112304 0.004799562319705561 0.027899619727839654 ['nc|ENSG00000143374|Q9BW92-2|TARS2', 'ENSG00000143374|ENST00000369064|TARS2'] 39537 7501 HLGALLAR True PC9_epitope_Rep2 849.51847078713 849.51736993586 34.222 2 0.05042084884483182 0.004799562319705561 0.027905518306555525 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 61738 17008 LLAESVTEV True PC9_epitope_Rep4 959.5175272972699 959.51642993586 73.415 2 0.050416513114355535 0.004799562319705561 0.0279080405508776 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 28190 17445 FREDMPSIL True PC9_epitope_Rep6 1106.5430308524599 1106.54192993586 79.719 2 0.050409587178294836 0.004799562319705561 0.02791207002989678 ['ENSG00000125676|ENST00000245838|THOC2'] 53160 13698 KQADPFASL True PC9_epitope_Rep6 975.5025459394699 975.50144993586 64.476 2 0.05040006869355444 0.004799562319705561 0.027917608690359266 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 32230 6698 GEYGRTVVP True NCI_RA007_Epitope_Rep4 976.4977949121999 976.49668993586 32.387 2 0.05039922777317203 0.004799562319705561 0.027918098056251277 ['ENSG00000167972|ENST00000301732|ABCA3'] 105453 10404 SRVDGVVL True PC9_epitope_Rep4 843.48141657207 843.48030993586 47.724 2 0.050372029175380265 0.004799562319705561 0.02793393016348672 ['ENSG00000134247|ENST00000393203|PTGFRN', 'ENST00000496699.1_1_1:117509714-117517097:+|nuORF'] 72832 9358 MPNGDHIVSA True PC9_epitope_Rep1 1039.47567956863 1039.4745899358602 40.853 2 0.050370404193688594 0.004799562319705561 0.027934876307459684 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 13379 7427 DLYDAGVK True NCI_RA007_Epitope_Rep2 879.43379767331 879.43270993586 33.516 2 0.0503492357222062 0.004799562319705561 0.02794720424482174 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 5851 19323 APFLASAVSA True PC9_epitope_Rep5 932.4967322830399 932.49562993586 79.37 2 0.05034584214503607 0.004799562319705561 0.027949181023074258 ['ENSG00000146242|ENST00000369750|TPBG'] 5678 13769 APAGIPAVA True PC9_epitope_Rep2 765.43848913093 765.4379449679301 58.248 1 0.05034402253725096 0.004799562319705561 0.027950241006533434 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 1527 6277 AEEPASVTP True H1975_Epitope_Rep2 899.42362691243 899.42307496793 29.088 1 0.05032745274510114 0.004799562319705561 0.027959895126932203 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF', 'MIA3|p.T1568Lfs*50|1|0.04|ENSG00000154305|chr1:222658815-222658816|-/CTGTCCTTTAGGAT|frameshift_variant'] 119865 7754 VDFNVPM[Oxidation]K True H1975_Epitope_Rep3 964.4688036634799 964.46770993586 34.81 2 0.050321813649773645 0.004799562319705561 0.027963181333579088 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 75122 12820 NHYGGVVSL True PC9_epitope_Rep1 944.4715801643599 944.47048993586 54.186 2 0.05031299440984872 0.004799562319705561 0.02796832147467153 ['nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 27915 21264 FQEEDFPAL True PC9_epitope_Rep5 1094.4920408254197 1094.49147496793 86.842 1 0.05030772848287133 0.004799562319705561 0.027971391031324403 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 118325 13430 TYMGHTGAVW True PC9_epitope_Rep2 1121.4964150132098 1121.4953099358602 56.94 2 0.05028660059930685 0.004823350985803436 0.02798370969245493 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 28797 18105 FSVDDVQTV True PC9_epitope_Rep4 1008.4763907612801 1008.47528993586 77.706 2 0.05028381015355899 0.004823350985803436 0.027985337030485665 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 1624 12309 AEFLPDPSA True H1975_Epitope_Rep3 945.4443623570099 945.44381496793 52.528 1 0.05027667949336242 0.004823350985803436 0.027989495887911185 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 5227 22982 ALPEIFTEL True PC9_epitope_Rep2 1031.55391280599 1031.55280993586 93.895 2 0.050271307444818406 0.004823350985803436 0.027992629424374808 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 1237 6628 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.40686993586 30.403 2 0.050267848479981767 0.004823350985803436 0.027994647217618955 ['ENSG00000162783|ENST00000367577|IER5'] 32032 12943 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.49187496793 54.86 1 0.05026402127331718 0.004823350985803436 0.027996879976774348 ['ENSG00000051523|ENST00000261623|CYBA'] 140547 5415 YRPGTVALR True PC9_epitope_Rep4 1031.5876129761098 1031.58650993586 27.559 2 0.050255370847335334 0.004823350985803436 0.028001927146254532 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 24838 13061 FAVPENSSV True PC9_epitope_Rep6 948.4552613938799 948.45416993586 61.845 2 0.05024377039314144 0.004823350985803436 0.02800869681206067 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 36269 17177 GVDVTLPRV True PC9_epitope_Rep1 954.5498304850599 954.54872993586 70.892 2 0.05023778493597359 0.004823350985803436 0.028012190311129368 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 101537 20977 SLLGGDVVSV True PC9_epitope_Rep1 944.51786165044 944.51731496793 85.513 1 0.05023182592385611 0.004841833440929632 0.02801566876174471 ['nc|ENSG00000157514|Q99576|TSC22D3'] 24777 12705 FASTILHL True H1975_Epitope_Rep1 900.5069030439199 900.50580993586 53.926 2 0.05023153741039515 0.004841833440929632 0.028015837185326943 ['ENSG00000129562|ENST00000250498|DAD1'] 129318 22092 VQYALPLQL True PC9_epitope_Rep2 1043.60153170475 1043.6004299358601 90.449 2 0.05023056167927852 0.004841833440929632 0.028016406788085032 ['ENSG00000133704|ENST00000256079|IPO8'] 49023 11677 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 51.569 2 0.05022940150521675 0.004841833440929632 0.028017084076600036 ['ENSG00000197747|ENST00000368811|S100A10'] 2657 7797 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 34.938 2 0.05017645082674223 0.004841833440929632 0.02804801128705613 ['ENSG00000038219|ENST00000040738|BOD1L1'] 1219 8082 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.46036993586 36.034 2 0.050166229671332475 0.004841833440929632 0.0280539847259713 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 17675 16573 EHLQVITTL True PC9_epitope_Rep2 1052.5866099166 1052.58607496793 68.986 1 0.05016200127546158 0.004841833440929632 0.028056456213647555 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 128990 18345 VQLDPQTVGV True PC9_epitope_Rep2 1054.56587447202 1054.56476993586 75.894 2 0.05015557000779041 0.004841833440929632 0.02806021564758179 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 101856 11586 SLPKGVVEV True PC9_epitope_Rep4 926.54368247546 926.5431349679301 52.325 1 0.05015269552809324 0.004841833440929632 0.028061896086416075 ['ENSG00000149257|ENST00000358171|SERPINH1'] 55077 13849 KYVTVYNLI True NCI_RA007_Epitope_Rep4 1111.62774645259 1111.62664993586 60.53 2 0.050116902419889815 0.004841833440929632 0.028082828489037513 ['ENSG00000138592|ENST00000307179|USP8', 'ENST00000560954.5_1_15:50731270-50751199:+|nuORF', 'ENST00000558892.1_1_15:50731270-50736797:+|nuORF'] 140844 14573 YSDPSVVFV True H1975_Epitope_Rep1 1011.49131254943 1011.4907749679301 61.26 1 0.05011397073936206 0.004841833440929632 0.028084543601950316 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF', 'ABCA1|p.L710Q|1|0.28|ENSG00000165029|chr9:104827156-104827156|A/T|missense_variant'] 91981 9725 RKQMVIDVL True NCI_RA007_Epitope_Rep4 1100.6375999436398 1100.6365099358602 44.252 2 0.05011341883108574 0.004841833440929632 0.028084866493776253 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 14179 14219 DSDSDQLFY True H1975_Epitope_Rep2 1088.42983449168 1088.42927496793 59.843 1 0.05009627263930812 0.004841833440929632 0.028094899458895407 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 9965 9709 AYNPVTHQL True PC9_epitope_Rep2 1041.52434401321 1041.5232499358601 42.684 2 0.05008583062158262 0.004841833440929632 0.02810101109474276 ['ENST00000525625.1_1_11:125884983-125893371:-|nuORF', 'ENSG00000064309|ENST00000531738|CDON', 'nc|ENSG00000064309|Q4KMG0|CDON'] 37950 13587 HACGVIATI True PC9_epitope_Rep5 883.4585729525099 883.45746993586 57.285 2 0.05008471564776873 0.004841833440929632 0.028101663750815367 ['ENSG00000183726|ENST00000374358|TMEM50A', 'ENST00000480937.5_1_1:25666968-25687193:+|nuORF'] 142646 15413 YYPAKIEAI True PC9_epitope_Rep3 1066.5698972233 1066.5688099358601 64.44 2 0.050078424335229216 0.004841833440929632 0.028105346658946883 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 117690 21138 TVTTVILEV True PC9_epitope_Rep3 973.5695628701299 973.56846993586 86.592 2 0.05007333420836498 0.004841833440929632 0.02810832671335617 ['ENSG00000119203|ENST00000238112|CPSF3'] 2268 7765 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 34.816 1 0.050071087555963595 0.004841833440929632 0.028109642123232925 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 40553 8812 HRFPTVAV True PC9_epitope_Rep6 925.5133854066898 925.5122899358599 43.805 2 0.05006920152285761 0.004841833440929632 0.02811074643376567 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 4648 8245 ALADGVQKV True PC9_epitope_Rep5 899.5076313199099 899.50652993586 36.656 2 0.050055048046572036 0.004841833440929632 0.028119034816436392 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 121336 2844 VEVEGTVKA True H1975_Epitope_Rep1 930.5022115862998 930.50110993586 14.576 2 0.050041044745224805 0.004841833440929632 0.028127237402600248 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.W2288C|1|0.56|ENSG00000278540|chr17:37097023-37097023|C/A|missense_variant'] 34785 19137 GQGEVLVYV True PC9_epitope_Rep4 962.5072969667398 962.50618993586 81.706 2 0.05003788690667711 0.004841833440929632 0.028129087436040565 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 72983 18127 MQMSPALTC True PC9_epitope_Rep1 980.4129452830399 980.41184993586 74.516 2 0.05003771752798251 0.004841833440929632 0.02812918667035464 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 48297 6718 IYQRHVYNL True NCI_RA007_Epitope_Rep4 1204.6352914445197 1204.6336349037902 32.464 3 0.050037087879584836 0.004841833440929632 0.02812955556675652 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 115122 11565 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 49.498 2 0.050033351484358286 0.004841833440929632 0.02813174472297273 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 94919 8410 RTFEKIEEV True PC9_epitope_Rep2 1149.60298825673 1149.60133490379 37.719 3 0.05003299770582185 0.004841833440929632 0.028131952009912503 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 48299 5991 IYQRHVYNL True NCI_RA007_Epitope_Rep5 1204.6352914445197 1204.6336349037902 29.728 3 0.0500261101098018 0.004841833440929632 0.02813598788171373 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 97472 11830 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 50.65 1 0.04999711251913026 0.004841833440929632 0.028152985046833848 ['ENSG00000135900|ENST00000258383|MRPL44'] 93109 7004 RPNPPPVSV True PC9_epitope_Rep6 961.53451477409 961.53340993586 35.93 2 0.049986062563923614 0.004841833440929632 0.02815946447623218 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 8320 4127 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 22.789 2 0.04998079912892136 0.004841833440929632 0.0281625512966231 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 11883 8194 DHIKDSFHSL True PC9_epitope_Rep2 1197.57783613805 1197.57619490379 36.876 3 0.04997694851361769 0.004841833440929632 0.028164809739021152 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 118443 15754 TYPENWRAF True PC9_epitope_Rep6 1182.5458077337798 1182.54470993586 72.83 2 0.049967167730166115 0.004841833440929632 0.028170547038931217 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 86795 19795 QLNGILLHL True PC9_epitope_Rep4 1019.6127650947899 1019.61166993586 84.267 2 0.04995589056087658 0.004841833440929632 0.028177163397080804 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 2075 13732 AELDSVFSSA True H1975_Epitope_Rep3 1024.47130538084 1024.4707749679299 58.117 1 0.04993872660419858 0.004841833440929632 0.02818723621788578 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1', 'nc|ENSG00000173744|P52594-3|AGFG1', 'nc|ENSG00000173744|P52594-4|AGFG1'] 21589 4174 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 22.997 2 0.0499325780669909 0.004841833440929632 0.028190845323481938 ['ENSG00000180921|ENST00000388913|FAM83H'] 57486 6901 LEDGGSALA True H1975_Epitope_Rep3 831.3974121645899 831.39686496793 31.505 1 0.04992204132018689 0.004841833440929632 0.02819703120595975 ['ENSG00000223496|ENST00000435634|EXOSC6'] 87577 16529 QQLGTAVEL True PC9_epitope_Rep4 957.5131106231698 957.51200993586 71.551 2 0.04992112790707914 0.004841833440929632 0.028197567506911558 ['ENSG00000138594|ENST00000308580|TMOD3'] 117647 14079 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.5067449679301 58.988 1 0.04992083123949962 0.004841833440929632 0.02819774169413629 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 128759 19976 VPYLVGQVV True PC9_epitope_Rep4 972.5644179200399 972.56386496793 84.971 1 0.0499115810595217 0.004841833440929632 0.028203173383448223 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 38539 3381 HESGHAIIA True NCI_RA007_Epitope_Rep4 933.4668291370899 933.4657299358599 18.838 2 0.04989596671094601 0.004841833440929632 0.028212344219835903 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 93562 9654 RQLPAMTAL True NCI_RA007_Epitope_Rep3 999.5535359665099 999.55242993586 45.052 2 0.04988977212435659 0.004841833440929632 0.028215983247893078 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 15249 12221 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 52.029 2 0.04986993336676138 0.004841833440929632 0.02822764040342787 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 85358 9116 QETSSIVSV True NCI_RA007_Epitope_Rep3 948.47639076128 948.47528993586 42.944 2 0.0498693078837244 0.004841833440929632 0.028228008004036333 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant'] 63570 18933 LMDPMNVFY True H1975_Epitope_Rep2 1128.49838915916 1128.4972899358602 78.592 2 0.04986898068007163 0.004841833440929632 0.02822820030553653 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 4902 23937 ALFGALFLA True PC9_epitope_Rep3 921.5323895157699 921.53184496793 97.359 1 0.04985310609249002 0.004841833440929632 0.028237531394888438 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 40647 9234 HRNGGLITL True PC9_epitope_Rep4 979.55631284783 979.55520993586 43.116 2 0.04985179816159464 0.004841833440929632 0.028238300319948412 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 45170 12629 IPPPVPPSA True PC9_epitope_Rep2 873.4960040070499 873.49490993586 53.886 2 0.04983086888597746 0.004841833440929632 0.028250607062780247 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 45364 8262 IQDNHDGTYTV True PC9_epitope_Rep3 1261.55749461629 1261.5563899358601 36.755 2 0.04982489589499652 0.004841833440929632 0.028254120153046475 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 134865 21704 VYVLTVTEL True PC9_epitope_Rep5 1035.5852129342697 1035.5841099358602 88.533 2 0.04982411164508045 0.004841833440929632 0.0282545814485148 ['ENSG00000196368|ENST00000375992|NUDT11', 'ENSG00000122824|ENST00000356450|NUDT10'] 40741 3990 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 21.577 3 0.04982366667275014 0.004841833440929632 0.028254843184039213 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 47772 23092 IYEPNFIFF True PC9_epitope_Rep4 1188.5855472874398 1188.5849749679298 97.045 1 0.049814573110710095 0.004841833440929632 0.028260192548356263 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 121812 17088 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 70.88 2 0.04980776610360095 0.004841833440929632 0.028264197418913284 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 90433 5927 REINITSA True NCI_RA007_Epitope_Rep4 902.48214484806 902.48104993586 29.419 2 0.0498035930425227 0.004841833440929632 0.02826665287012278 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1', 'SMCHD1-NDC80|5|fusion'] 111557 8068 TIAPALVSK True PC9_epitope_Rep6 898.5487678559 898.54766993586 40.53 2 0.04979917251478829 0.004863161551249287 0.028269254139624955 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 137643 11604 YEIAEGISA True H1975_Epitope_Rep2 951.4549270407099 951.45382993586 49.701 2 0.049791684097891926 0.004863161551249287 0.02827366120281078 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 2893 7972 AEVTSTLEA True H1975_Epitope_Rep1 919.44984166027 919.4492949679301 35.614 1 0.04976550676897039 0.004863161551249287 0.028289071832148564 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 35196 10620 GRADGYVL True PC9_epitope_Rep5 849.43446637965 849.43336993586 45.837 2 0.0497654858126155 0.004863161551249287 0.028289084172184974 ['ENSG00000142937|ENST00000396651|RPS8'] 94981 6250 RTNSTFNQV True PC9_epitope_Rep5 1065.5203212619301 1065.51922993586 29.019 2 0.04976397557616048 0.004863161551249287 0.028289973479409612 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 1162 7905 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 35.38 1 0.04976239942166298 0.004863161551249287 0.028290901629269345 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 17307 13359 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50708496793 63.047 1 0.04974569479862639 0.004863161551249287 0.028300740148044082 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 17808 6389 EHSTEGSVSL True PC9_epitope_Rep2 1044.47236801 1044.4712699358602 29.982 2 0.049740810072721596 0.004863161551249287 0.02830361768093001 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 121981 11370 VFTSRSAAF True PC9_epitope_Rep5 984.5028802926398 984.50178993586 48.731 2 0.04973967346326732 0.004863161551249287 0.028304287281231584 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 30050 19293 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6171499358602 79.015 2 0.049738328669693466 0.004863161551249287 0.028305079545386743 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 24682 20814 FALPGLLHA True PC9_epitope_Rep5 937.5385375253701 937.53798496793 85.11 1 0.04973777215136994 0.004863161551249287 0.028305407415263186 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 162 13155 AADPVSPLL True NCI_RA007_Epitope_Rep3 881.4858332461699 881.48472993586 59.019 2 0.04972316117234483 0.004863161551249287 0.028314016609887728 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 24520 19913 FAFPGSTNSL True PC9_epitope_Rep4 1039.49746055903 1039.49636993586 84.731 2 0.049696774453158336 0.004863161551249287 0.02832957031667791 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 53048 8568 KPNEGAIVEV True PC9_epitope_Rep6 1054.56587447202 1054.56476993586 42.733 2 0.049691619566786194 0.004863161551249287 0.028332609765048148 ['ENSG00000004478|ENST00000001008|FKBP4'] 87810 7033 QREAEQSNVAL True PC9_epitope_Rep3 1243.61567819875 1243.61458993586 32.064 2 0.049682524887749546 0.004863161551249287 0.0283379729218854 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 115224 19681 TRDVAFLL True PC9_epitope_Rep5 933.5283667644899 933.52726993586 80.757 2 0.04964508586321397 0.004863161551249287 0.02836006035448971 ['ENSG00000164291|ENST00000380009|ARSK'] 54447 9391 KYGALVNNF True NCI_RA007_Epitope_Rep3 1024.53418042092 1024.53308993586 44.03 2 0.0496384427462998 0.004863161551249287 0.028363981114746386 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 128223 11480 VPNKFLVTA True PC9_epitope_Rep6 987.5753169569099 987.57420993586 55.229 2 0.04963405642632248 0.004863161551249287 0.028366570180949957 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 32002 5376 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 25.745 1 0.049620421681882146 0.004863161551249287 0.02837461956189181 ['ENSG00000108344|ENST00000264639|PSMD3'] 17492 5258 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.53465490379 26.924 3 0.04961234921087738 0.004863161551249287 0.02837938617010684 ['ENSG00000162378|ENST00000294353|ZYG11B'] 1453 7728 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 34.678 1 0.04959904034342933 0.004863161551249287 0.02838724630919676 ['ENSG00000173545|ENST00000308683|ZNF622'] 88496 20159 QSVDLVFPV True PC9_epitope_Rep6 1002.5385970950199 1002.53750993586 90.214 2 0.049598128239649396 0.004863161551249287 0.028387785063429316 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 28200 13132 FREDSVVL True PC9_epitope_Rep4 963.5025459394699 963.50144993586 58.407 2 0.049597023383547635 0.004863161551249287 0.02838843768328971 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.L649Wfs*7|1|0.08|ENSG00000106608|chr7:43877517-43877517|A/-|frameshift_variant'] 124860 17573 VHLETILGA True PC9_epitope_Rep1 951.5389314481898 951.53782993586 72.387 2 0.049591230758625496 0.004863161551249287 0.028391859508104023 ['ENSG00000165591|ENST00000374900|FAAH2'] 58201 13058 LELDTNLPA True H1975_Epitope_Rep1 984.51277627 984.51222496793 55.313 1 0.04958559060163711 0.004863161551249287 0.02839519162037412 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 67809 21637 LTAEDLFEA True PC9_epitope_Rep1 1007.4811417885498 1007.48057496793 88.053 1 0.04957837067601005 0.004863161551249287 0.028399457543041136 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 114839 19720 TQNDIISTL True PC9_epitope_Rep1 1003.51858992643 1003.51807496793 80.68 1 0.04956907216957956 0.004863161551249287 0.02840495244579012 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 139585 22615 YLVYILNEL True PC9_epitope_Rep4 1138.6274120994199 1138.62630993586 95.219 2 0.049564573349030284 0.004863161551249287 0.028407611340123543 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 102996 16978 SPFGTITSA True PC9_epitope_Rep3 879.43379767331 879.43324496793 70.466 1 0.049562817118580876 0.004863161551249287 0.028408649368232168 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 14085 8019 DRTAIHEVM True PC9_epitope_Rep5 1070.51787873378 1070.51678993586 35.783 2 0.04955216615714427 0.004885549190288421 0.028414945392805407 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 73433 14369 M[Oxidation]VADKFTEL True PC9_epitope_Rep1 1068.51614777872 1068.5150499358601 60.095 2 0.04952997252721738 0.004885549190288421 0.028428068548248118 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 623 13655 AASGHFICV True PC9_epitope_Rep1 903.4272728242299 903.42616993586 57.379 2 0.049528127263964966 0.004885549190288421 0.0284291599009026 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74649977-74650720:+|nuORF'] 35482 6762 GSLFLRTPK True NCI_RA007_Epitope_Rep5 1017.5971150306499 1017.59600993586 32.686 2 0.04952114415054867 0.004885549190288421 0.028433290294487504 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000437325.2_1_1:235901419-235901638:+|nuORF'] 103854 6619 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 32.62 2 0.04951573990386695 0.004885549190288421 0.028436487182390204 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 119058 10673 VAGGAVYL True H1975_Epitope_Rep2 748.4119400299201 748.41139496793 46.078 1 0.0495128462349005 0.004885549190288421 0.028438199067116986 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 61266 23544 LIPEYLNFI True PC9_epitope_Rep1 1120.61684741572 1120.61574993586 95.353 2 0.04948343135994362 0.004885549190288421 0.028455606022891284 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 111073 12275 THDLEGPPL True PC9_epitope_Rep3 977.4818104948899 977.48070993586 52.242 2 0.04947852655479986 0.004885549190288421 0.02845850948264062 ['ENSG00000169564|ENST00000303577|PCBP1'] 121816 15367 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 67.042 2 0.04944550440157236 0.004885549190288421 0.02847806422948444 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 65389 12407 LREERAYIL True PC9_epitope_Rep5 1161.6506071554898 1161.64897490379 52.722 3 0.04944469475635268 0.004885549190288421 0.02847854382797731 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 138672 16762 YIITGGGFL True H1975_Epitope_Rep3 939.5065686907499 939.5060249679301 70.016 1 0.04942793773574639 0.004885549190288421 0.028488471572668494 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 85715 14800 QHADPPVQIL True PC9_epitope_Rep3 1116.5927579262 1116.5916699358602 62.063 2 0.04941816642529167 0.004885549190288421 0.02849426203755442 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 35236 15790 GRAPQVLVL True PC9_epitope_Rep5 951.5865503469499 951.58544993586 65.725 2 0.049416305469381645 0.004885549190288421 0.028495364956363033 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 96720 20320 SALPFITYL True H1975_Epitope_Rep1 1023.5640835668698 1023.56298993586 84.519 2 0.04940238840130499 0.004885549190288421 0.0285036142876034 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 86301 7772 QISEVVVVK True NCI_RA007_Epitope_Rep4 999.5964463243099 999.59534993586 36.577 2 0.04939901559266058 0.004885549190288421 0.02850561383778567 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 129364 14474 VRDGATLIL True PC9_epitope_Rep2 956.5654805492 956.56438993586 60.944 2 0.04939869962259146 0.004885549190288421 0.028505801165227718 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 118352 16346 TYNEPGSQVF True PC9_epitope_Rep5 1140.50875351872 1140.5076499358602 67.872 2 0.0493982055342796 0.004885549190288421 0.028506094094855428 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 98882 11837 SGVSLAALK True PC9_epitope_Rep1 844.50181766348 844.50072993586 50.396 2 0.0493952367862826 0.004885549190288421 0.02850785422992298 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 118131 16011 TYIKFVNLF True NCI_RA007_Epitope_Rep3 1143.63283183303 1143.6317299358602 70.655 2 0.0493929647192514 0.004885549190288421 0.028509201376655795 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 82599 6851 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.40686993586 31.271 2 0.04939256732956963 0.004885549190288421 0.02850943700150868 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 89191 6622 QVSPEAGVQKV True PC9_epitope_Rep4 1140.6138872935999 1140.61278993586 32.63 2 0.049382961135938735 0.004904510663595155 0.028515133344383468 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 134753 13791 VYTSVVEEL True NCI_RA007_Epitope_Rep5 1037.5280919809697 1037.52698993586 59.723 2 0.049381109154838634 0.004904510663595155 0.0285162316607795 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 115057 15189 TRDDSPLYI True PC9_epitope_Rep5 1078.5294889632999 1078.52838993586 63.431 2 0.04937791802368468 0.004904510663595155 0.028518124247872194 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 24608 16784 FAIPLIEKL True H1975_Epitope_Rep1 1042.64266824074 1042.6415699358602 69.96 2 0.04937397629398285 0.004904510663595155 0.02852046215242214 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 2764 5565 AETPGTVSP True H1975_Epitope_Rep2 857.41306222873 857.4125149679301 26.415 1 0.0493717852680907 0.004904510663595155 0.028521761759702485 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 108807 4428 SYTSHTNEI True NCI_RA007_Epitope_Rep3 1050.4618033263002 1050.4607099358602 24.213 2 0.049368254903452695 0.004904510663595155 0.0285238559069884 ['ENSG00000112936|ENST00000313164|C7'] 110038 19428 TEKVCQFIL True PC9_epitope_Rep5 1079.5685173243098 1079.56740993586 79.78 2 0.04935542179868684 0.004904510663595155 0.02853146942314621 ['ENST00000483613.1_1_8:12428002-12428092:-|nuORF'] 89241 18902 QVVGGIYGV True PC9_epitope_Rep3 890.4861675993399 890.48561496793 77.929 1 0.04935513940712371 0.004904510663595155 0.028531636978399215 ['ENSG00000167658|ENST00000309311|EEF2'] 44572 16645 ILPKELQTW True PC9_epitope_Rep6 1126.6386454894598 1126.63754993586 76.492 2 0.0493415333978883 0.004904510663595155 0.028539711057499546 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 40410 7716 HQVPAVSSV True PC9_epitope_Rep5 922.4872302285 922.48612993586 34.622 2 0.049327807628585345 0.004904510663595155 0.028547858268258442 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 39532 5767 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 28.87 2 0.04932012623846372 0.004904510663595155 0.028552418618965597 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 111629 15895 TIDQLYLEY True H1975_Epitope_Rep1 1156.5652057656798 1156.56467496793 66.449 1 0.04930386496609549 0.004904510663595155 0.02856207488696688 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 77299 11551 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46637496793 49.492 1 0.04929222131092496 0.004904510663595155 0.028568990909949698 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 76801 4934 NRAPNTAEL True PC9_epitope_Rep2 984.4988575413599 984.49776993586 24.342 2 0.04928289374924244 0.004904510663595155 0.028574532311457655 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'nc|ENSG00000162924|Q04864|REL'] 98129 9663 SESLIKQIP True H1975_Epitope_Rep1 1013.57571087973 1013.5746099358599 42.094 2 0.049277670851255034 0.004904510663595155 0.028577635595916515 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 9026 12430 AVHDSFVAV True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 52.675 2 0.04927415420680537 0.004904510663595155 0.028579725246503904 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 21358 11506 ERFSTSQVL True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 52.019 2 0.0492730159127901 0.004904510663595155 0.028580401669550982 ['ENSG00000181481|ENST00000328381|RNF135'] 6802 9621 AQEPGNYEV True PC9_epitope_Rep4 1005.4403396057298 1005.43924993586 44.631 2 0.049270773559021576 0.004904510663595155 0.02858173421392073 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 6328 9507 APRPTIINA True PC9_epitope_Rep3 951.5501648382299 951.54906993586 41.516 2 0.04926830539782432 0.004904510663595155 0.028583201010955444 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 29225 19512 FTVAELKQL True PC9_epitope_Rep3 1047.59644632431 1047.5953499358602 80.284 2 0.04925882790204549 0.004904510663595155 0.02858883399046604 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 121857 16608 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 69.019 2 0.04925694243140585 0.004904510663595155 0.028589954743873873 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 90748 3562 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5876299358601 19.719 2 0.04925396287917059 0.004904510663595155 0.028591725916425968 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 41467 12227 HYLDTTTLI True NCI_RA007_Epitope_Rep4 1075.55497543515 1075.5538699358601 54.026 2 0.04923765622150756 0.004904510663595155 0.028601421019390467 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 72387 18263 MKFNPFVTSD True PC9_epitope_Rep4 1184.5535955361597 1184.5524899358602 78.319 2 0.049236928940587794 0.004904510663595155 0.028601853491595396 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 96747 20576 SAMEVVPAL True PC9_epitope_Rep1 915.4735543103099 915.47300496793 83.959 1 0.049226706745913174 0.004904510663595155 0.02860793266047427 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 9694 19459 AYGGAFYAF True PC9_epitope_Rep6 965.42831837005 965.4277649679301 87.512 1 0.049225545950359675 0.004904510663595155 0.0286086230617621 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 98160 8261 SESRFFVSS True H1975_Epitope_Rep1 1044.48762415132 1044.48652993586 36.714 2 0.049217381937434336 0.004904510663595155 0.028613479155441917 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 124776 5812 VHDGDTVSV True PC9_epitope_Rep1 927.42977492203 927.42866993586 27.171 2 0.04921719243068326 0.004904510663595155 0.028613591886002147 ['ENSG00000186111|ENST00000335312|PIP5K1C', 'nc|ENSG00000186111|O60331-4|PIP5K1C', 'nc|ENSG00000186111|O60331-3|PIP5K1C', 'ENST00000486866.1_1_1:151209168-151212598:+|nuORF', 'nc|ENSG00000143398|Q99755-2|PIP5K1A', 'nc|ENSG00000143398|Q99755-4|PIP5K1A', 'nc|ENSG00000143398|Q99755-3|PIP5K1A', 'ENSG00000143398|ENST00000368888|PIP5K1A', 'nc|ENSG00000186111|O60331-2|PIP5K1C'] 109675 4564 TEAVPRAPA True H1975_Epitope_Rep2 910.4872302284998 910.48612993586 22.662 2 0.049215697391369946 0.004904510663595155 0.028614481243496775 ['ENSG00000168476|ENST00000306306|REEP4'] 46560 22539 ITAFDLTDV True PC9_epitope_Rep5 993.5018772331299 993.50132496793 91.702 1 0.04921372759804751 0.004904510663595155 0.02861565305661692 ['ENSG00000100228|ENST00000263116|RAB36', 'nc|ENSG00000100228|O95755-2|RAB36'] 7988 17873 ATDFGEALV True PC9_epitope_Rep6 921.4443623570098 921.44326993586 81.375 2 0.049208315258697934 0.004904510663595155 0.028618873030968515 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 1296 7976 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 35.626 1 0.04920742464533968 0.004904510663595155 0.028619402916369815 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 35919 5863 GTSEFITGK True NCI_RA007_Epitope_Rep5 938.4709114580198 938.46980993586 29.237 2 0.049200775817192 0.004904510663595155 0.02862335902481447 ['ENSG00000110002|ENST00000456829|VWA5A', 'VWA5A|p.R449S|1|0.19|ENSG00000110002|chr11:124135022-124135022|G/C|missense_variant'] 77883 10272 NVHAVFQEA True PC9_epitope_Rep5 1013.4930438849299 1013.49194993586 44.498 2 0.04919301122161439 0.004904510663595155 0.028627979641074646 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 134288 13872 VYNPTPNSL True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 58.641 2 0.0491910321600181 0.004904510663595155 0.02862915746282039 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 69430 22056 LTYGTMVFV True PC9_epitope_Rep5 1029.5205045027299 1029.51940993586 89.865 2 0.049184992158279095 0.004904510663595155 0.028632752385699137 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000589744.1_1_17:73949530-73951667:-|nuORF'] 104931 9982 SRDDTTLNAL True PC9_epitope_Rep4 1104.54111627616 1104.54000993586 46.056 2 0.049176970867807306 0.004904510663595155 0.028637527165183346 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 75089 15424 NHVPVITTL True PC9_epitope_Rep5 992.5654805492001 992.56438993586 64.337 2 0.049176753900289194 0.004904510663595155 0.028637656327829483 ['ENST00000609454.5_1_22:38228707-38236239:-|nuORF', 'ENST00000498417.5_1_22:38228707-38229954:-|nuORF', 'ENSG00000100124|ENST00000215941|ANKRD54'] 39822 10995 HNIKLFVL True NCI_RA007_Epitope_Rep3 982.59638675466 982.59528993586 50.337 2 0.04916739668372853 0.004904510663595155 0.028643227254013998 ['SLCO2B1|p.I622Sfs*10|1|0.47|ENSG00000137491|chr11:75203340-75203340|C/-|frameshift_variant', 'nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1', 'SLCO2B1|p.S330Lfs*15|1|0.5|ENSG00000137491|chr11:75188148-75188148|C/-|frameshift_variant'] 32877 10633 GHSGDVMSL True PC9_epitope_Rep1 901.3963666187701 901.39526993586 45.792 2 0.049161638138629296 0.004904510663595155 0.028646656149863062 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 107717 10029 SVSDIIVVAK True NCI_RA007_Epitope_Rep4 1029.60701100801 1029.6059099358602 45.42 2 0.04915222712324497 0.004904510663595155 0.02865226067753438 ['ENST00000583120.1_1_17:31258522-31263466:+|nuORF', 'ENSG00000006042|ENST00000579849|TMEM98'] 36815 23538 GVLENIFGV True PC9_epitope_Rep5 946.5123823471798 946.51128993586 95.523 2 0.04914435444688594 0.004904510663595155 0.028656949830993584 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 96 15185 AAAPVVPAV True PC9_epitope_Rep3 793.4697892592098 793.46868993586 63.553 2 0.04913118542827731 0.004904510663595155 0.02866479514053586 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 26709 19695 FIVHTIEEI True PC9_epitope_Rep5 1099.5913609438699 1099.59026993586 80.807 2 0.04912989742452339 0.004904510663595155 0.028665562558463118 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 118585 20007 TYQVLAVTF True PC9_epitope_Rep6 1040.5542471591598 1040.5531499358601 89.623 2 0.04912962907759093 0.004904510663595155 0.028665722447138872 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 34893 19153 GQLSEGAIAAI True PC9_epitope_Rep2 1028.5502244078798 1028.54912993586 79.043 2 0.049129446555543646 0.004904510663595155 0.02866583119937986 ['ENSG00000132383|ENST00000254719|RPA1'] 67627 21361 LSVPGLVSV True PC9_epitope_Rep3 869.52221875489 869.52112993586 87.463 2 0.04912501427565334 0.004904510663595155 0.028668472200707076 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 105997 13852 SSVATVVYL True H1975_Epitope_Rep1 937.5120479940099 937.51149496793 58.43 1 0.04911359449704458 0.004904510663595155 0.02867527774514592 ['ENSG00000132383|ENST00000254719|RPA1'] 118509 15726 TYQDIQNTI True PC9_epitope_Rep2 1094.52440358286 1094.52387496793 65.761 1 0.04910369326620416 0.0049289146480408184 0.028681179485676986 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 73844 9149 NAMEDAQTL True NCI_RA007_Epitope_Rep5 991.42806066987 991.42696993586 41.84 2 0.049082227936528 0.0049289146480408184 0.028693977854313085 ['nc|ENSG00000196975|P09525|ANXA4', 'ENSG00000196975|ENST00000394295|ANXA4'] 121863 14908 VFPEKGYSF True PC9_epitope_Rep4 1072.5229470308798 1072.52184993586 65.286 2 0.04907437819079213 0.0049289146480408184 0.02869865941338187 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 30670 7255 GALALEEK True PC9_epitope_Rep5 829.4545331178899 829.45342993586 32.87 2 0.0490662561826566 0.004949025042066713 0.02870350406500586 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 85919 11764 QHGGFVVTV True PC9_epitope_Rep6 942.4923156089399 942.49120993586 56.412 2 0.04906572411197165 0.004949025042066713 0.028703821462326806 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 76457 15472 NQFPGFKEV True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 64.524 2 0.049062651085220475 0.004949025042066713 0.02870565468305738 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 26182 15392 FHDGDSVVF True PC9_epitope_Rep1 1021.4505103666099 1021.44940993586 64.023 2 0.049062568906845044 0.004949025042066713 0.028705703708176218 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 98209 6616 SETKIFTA True NCI_RA007_Epitope_Rep5 895.4650978015899 895.46400993586 32.109 2 0.04905537826094817 0.004949025042066713 0.028709993717589963 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 118436 18252 TYPENWRAF True PC9_epitope_Rep3 1182.5458077337798 1182.54470993586 75.416 2 0.04904573631707754 0.004949025042066713 0.028715747091659593 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 2061 7409 AELATRALP True NCI_RA007_Epitope_Rep5 940.5341804209199 940.53308993586 35.176 2 0.04903027434884266 0.004949025042066713 0.02872497543421832 ['ENSG00000173801|ENST00000393931|JUP'] 5661 5799 APAEEPAAAAA True PC9_epitope_Rep4 967.4610750503098 967.45996993586 29.162 2 0.049015852329360586 0.004949025042066713 0.028733585473522467 ['ENSG00000277443|ENST00000612661|MARCKS'] 57953 9990 LEGNLPVSA True H1975_Epitope_Rep3 898.47599683846 898.47488993586 43.463 2 0.04901433659319523 0.004949025042066713 0.02873449051134737 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 117884 10998 TWFNQPARKI True PC9_epitope_Rep4 1259.6774906096698 1259.67583490379 50.081 3 0.04901416643016797 0.004949025042066713 0.02873459211635131 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 107915 17126 SVVSPSSFENV True PC9_epitope_Rep6 1150.5506183307 1150.5495299358602 78.458 2 0.04900427808996022 0.004949025042066713 0.028740497032341515 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42'] 70602 26770 LWHIWRERN True H1975_Epitope_Rep2 1308.68397297244 1308.68233490379 110.4 3 0.049001565892001296 0.004949025042066713 0.02874211683591618 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 48179 24138 IYPPLLGALSF True PC9_epitope_Rep5 1189.6746966450098 1189.67358993586 97.833 2 0.04899985233654219 0.004949025042066713 0.028743140263036135 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 264 13501 AAGGVGSIVRV True PC9_epitope_Rep3 984.5716285588 984.57052993586 56.982 2 0.04898274022788577 0.004949025042066713 0.0287533623118249 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 32031 12812 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.49187496793 54.345 1 0.048955552052293336 0.004949025042066713 0.028769610035488648 ['ENSG00000051523|ENST00000261623|CYBA'] 1672 13799 AEGAPIIPISA True H1975_Epitope_Rep2 1037.57571087973 1037.57460993586 58.225 2 0.048933415351262784 0.004949025042066713 0.028782845023876825 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 92359 13844 RLPEAIEEV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 61.152 2 0.0489232988700642 0.004949025042066713 0.028788895223955894 ['ENST00000493368.5_1_9:37422710-37428742:+|nuORF', 'ENSG00000137106|ENST00000318158|GRHPR', 'ENST00000460882.5_1_9:37422710-37436776:+|nuORF', 'ENST00000377824.8_1_9:37422741-37431094:+|nuORF'] 33526 7278 GLDVEDVK True NCI_RA007_Epitope_Rep1 873.4443623570099 873.44326993586 32.301 2 0.04890277491451228 0.004949025042066713 0.028801173133560138 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 99761 23468 SIIPPLFTV True PC9_epitope_Rep3 985.58481901145 985.58372993586 95.548 2 0.048899547526708526 0.004949025042066713 0.02880310425657394 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 114414 15605 TPTPVPVV True PC9_epitope_Rep1 808.4694549060399 808.46890496793 64.844 1 0.04889273911181215 0.004949025042066713 0.028807178482585058 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 109008 6157 TAHFEQNTL True NCI_RA007_Epitope_Rep3 1059.49852318819 1059.49742993586 31.219 2 0.04887324510408204 0.004949025042066713 0.028818846737325397 ['ENSG00000153975|ENST00000368576|ZUP1'] 109324 20367 TAYDNFVEL True PC9_epitope_Rep4 1070.49204082542 1070.49147496793 86.486 1 0.04887299449297666 0.004949025042066713 0.028818996769496102 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 71798 4820 MEGPPRPQA True H1975_Epitope_Rep3 981.47020026537 981.46910993586 23.666 2 0.04886172975294267 0.004949025042066713 0.02882574129669943 ['ENST00000380502.7_2_9:19102712-19102766:-|nuORF'] 35194 9160 GRADGYVL True PC9_epitope_Rep4 849.43446637965 849.43336993586 42.826 2 0.0488527486828887 0.004949025042066713 0.028831119531306574 ['ENSG00000142937|ENST00000396651|RPS8'] 17341 15172 EHASSLLEL True PC9_epitope_Rep6 997.5080252427299 997.50692993586 70.435 2 0.048844096410326644 0.004949025042066713 0.0288363017134849 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 32929 9513 GIAGSLKTV True PC9_epitope_Rep2 844.5018176634801 844.50072993586 41.94 2 0.04883767906255679 0.004949025042066713 0.02884014584808168 ['ENSG00000008083|ENST00000341776|JARID2'] 109634 9220 TEALHFVAA True H1975_Epitope_Rep2 957.4919812557698 957.49088993586 40.418 2 0.04883753168398324 0.004949025042066713 0.028840234136497597 ['ENSG00000125817|ENST00000379751|CENPB'] 103417 8369 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 37.16 2 0.048837453662705914 0.004949025042066713 0.028840280875919597 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 91210 14263 RGDLPFVVPR True PC9_epitope_Rep2 1154.6560268890998 1154.65492993586 60.128 2 0.04883420669309344 0.004949025042066713 0.028842226065164473 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 95777 17682 RYIDRIHIF True PC9_epitope_Rep5 1231.68257599011 1231.68094490379 73.028 3 0.04883122008698392 0.004949025042066713 0.02884401537941232 ['ENSG00000174231|ENST00000304992|PRPF8'] 73458 15764 MVAPAVASV True PC9_epitope_Rep3 843.4524249429099 843.45132993586 65.795 2 0.04882058603337915 0.004949025042066713 0.028850387180639314 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 64556 13910 LPSDIAAEA True PC9_epitope_Rep2 885.4443623570099 885.44381496793 58.784 1 0.048818419633415974 0.004949025042066713 0.028851685415958325 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 99835 20543 SILETVTAV True PC9_epitope_Rep2 931.52261267771 931.52150993586 84.451 2 0.04881143079399349 0.004949025042066713 0.02885587389753605 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 1390 7129 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4601949679301 32.354 1 0.04879231671349638 0.004949025042066713 0.02886733192299962 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 42751 10362 IELPHTVDC True H1975_Epitope_Rep2 1025.48518162317 1025.48408993586 44.866 2 0.04878540936173833 0.004949025042066713 0.02887147356383601 ['ENSG00000131459|ENST00000253778|GFPT2', 'GFPT2|p.L645H|1|0.36|ENSG00000131459|chr5:180302493-180302493|A/T|missense_variant'] 120376 3861 VEEKEGIPP True H1975_Epitope_Rep3 996.5127762699998 996.51166993586 19.965 2 0.04876874406485049 0.004949025042066713 0.028881468236353673 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 96689 19409 SALDTITTV True PC9_epitope_Rep1 919.48622716899 919.4856749679301 79.467 1 0.04876108364991411 0.004949025042066713 0.02888606344756164 ['ENSG00000138160|ENST00000260731|KIF11'] 88803 9412 QTVAVGVIK True PC9_epitope_Rep3 913.5596668927699 913.55856993586 41.14 2 0.04874829653276745 0.004949025042066713 0.02889373543569475 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 73802 16279 NAIGSASVVTV True PC9_epitope_Rep2 1016.55022440788 1016.54912993586 67.861 2 0.04874528548847113 0.004965292359378474 0.028895542259683465 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 100372 6052 SKTSAQVVL True NCI_RA007_Epitope_Rep4 931.5338460677499 931.53274993586 29.896 2 0.04873618713724924 0.004965292359378474 0.028901002478108367 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'ENST00000528593.1_1_11:46804822-46806223:-|nuORF', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 128712 13292 VPWMPPGKSSA True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 56.162 2 0.04872884555851855 0.004965292359378474 0.028905409069448613 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 139435 20971 YLPPGFLSA True PC9_epitope_Rep2 963.50656869075 963.5060249679301 86.115 1 0.04872419609866912 0.004965292359378474 0.0289082000959106 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 99091 11770 SHGPIAVL True PC9_epitope_Rep2 792.4493881678001 792.44828993586 50.605 2 0.048722259695185885 0.004965292359378474 0.028909362571240427 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 60977 13355 LIDVGTGYY True H1975_Epitope_Rep3 999.49131254943 999.4907749679301 56.635 1 0.048716633657862135 0.004965292359378474 0.02891274026954801 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 80372 9226 PGHLQEGF True PC9_epitope_Rep1 883.41881631551 883.41770993586 40.341 2 0.048716327531620626 0.004965292359378474 0.028912924068325827 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 77093 12656 NRLPDGMAV True PC9_epitope_Rep3 971.48585032951 971.48474993586 53.706 2 0.04870905863191642 0.004965292359378474 0.02891728863511214 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 4425 5979 AIQNPTMINK True NCI_RA007_Epitope_Rep3 1128.59612905448 1128.59502993586 30.499 2 0.04869517021423261 0.004965292359378474 0.028925629482240676 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2', 'SP2|p.P373Qfs*22|1|0.12|ENSG00000167182|chr17:47923015-47923015|C/-|frameshift_variant'] 35215 11382 GRAPGGLSL True PC9_epitope_Rep3 826.4661008611 826.4650099358599 48.783 2 0.048691652419245904 0.004965292359378474 0.028927742473897337 ['ENSG00000171223|ENST00000302754|JUNB'] 140546 7190 YRPGTVALR True PC9_epitope_Rep3 1031.5876129761098 1031.58650993586 32.668 2 0.04867437957087577 0.004965292359378474 0.028938119541938645 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 98356 5894 SEYLQQHVA True NCI_RA007_Epitope_Rep5 1073.51417325233 1073.5130699358601 29.358 2 0.04866261077482932 0.004965292359378474 0.028945191819477963 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 1205 8025 AEDAGATEVKF True H1975_Epitope_Rep2 1136.5349682665599 1136.5338699358601 35.816 2 0.048660163193078525 0.004965292359378474 0.028946662849438212 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant'] 31879 10834 GELLFVHSA True H1975_Epitope_Rep3 971.50763131991 971.50708496793 46.752 1 0.04864153547683524 0.004965292359378474 0.02895786054106227 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 141966 18896 YVIELQHVV True PC9_epitope_Rep2 1098.60734536118 1098.6062499358602 78.047 2 0.048641516686301435 0.004965292359378474 0.02895787183857481 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000494984.5_1_3:49135981-49136101:-|nuORF'] 5852 17220 APFLASAVSA True PC9_epitope_Rep6 932.4967322830399 932.49562993586 78.827 2 0.04863566817366944 0.004965292359378474 0.028961388355325794 ['ENSG00000146242|ENST00000369750|TPBG'] 142128 20101 YVPPELITL True PC9_epitope_Rep6 1043.59029831471 1043.58920993586 89.994 2 0.04859488532695977 0.004965292359378474 0.028985920296390414 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 8878 18787 AVFPHLTVV True PC9_epitope_Rep4 981.5647522732099 981.56364993586 80.349 2 0.04858682147598653 0.004965292359378474 0.028990773101378025 ['ENSG00000134825|ENST00000537328|TMEM258'] 36656 20904 GVIGGGVFQAI True PC9_epitope_Rep4 1016.5654805491998 1016.56438993586 88.567 2 0.04857749456999336 0.004965292359378474 0.028996386911435593 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 26205 10986 FHDKYGNAVL True PC9_epitope_Rep5 1162.57710786206 1162.5754649037901 47.247 3 0.04857005181105881 0.004965292359378474 0.029000867358406138 ['ENST00000475465.1_1_X:77154999-77158279:+|nuORF', 'ENSG00000131174|ENST00000650309|COX7B', 'ENSG00000170516|ENST00000355591|COX7B2'] 52820 8762 KPAEFTVDA True PC9_epitope_Rep4 976.4865615221598 976.48546993586 41.21 2 0.04856390059600654 0.004965292359378474 0.029004570777247968 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 1189 13563 AEASPAPLVL True H1975_Epitope_Rep2 966.5385970950199 966.5380449679301 57.307 1 0.04854376490325042 0.004965292359378474 0.029016696676190164 ['ENSG00000173621|ENST00000309602|LRFN4'] 78366 15065 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.60641490379 63.08 3 0.04853524130836965 0.004965292359378474 0.029021831022071932 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 1166 7017 AEAPPSVAP True H1975_Epitope_Rep2 837.4232329896099 837.42212993586 31.916 2 0.04851764449342294 0.004965292359378474 0.029032433348109354 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 6062 8981 APLLQPRAA True PC9_epitope_Rep1 935.5552502186699 935.55414993586 39.391 2 0.04850803220757842 0.004965292359378474 0.029038226339587952 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 48934 2735 KEEEIARIA True H1975_Epitope_Rep2 1057.5767735088898 1057.57566993586 14.579 2 0.048506971593661595 0.004965292359378474 0.029038865597830605 ['ENSG00000171703|ENST00000343484|TCEA2', 'TCEA2|p.M28Ifs*34|1|0.12|ENSG00000171703|chr20:64066486-64066490|TGGAT/-|frameshift_variant'] 130927 17788 VTDGAFFDYM True H1975_Epitope_Rep2 1164.47976188956 1164.4786699358601 73.743 2 0.04849208558365458 0.004965292359378474 0.029047839085573235 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 35923 7896 GTSELLLAK True NCI_RA007_Epitope_Rep5 930.5385970950199 930.53750993586 37.064 2 0.048470306858059094 0.004965292359378474 0.02906097204069798 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1', 'ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 88155 10798 QRVDPDVL True PC9_epitope_Rep5 940.4977949121999 940.49668993586 46.525 2 0.04846909814196566 0.004965292359378474 0.029061701072502596 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 35220 11148 GRAPGGLSL True PC9_epitope_Rep5 826.4661008611 826.4650099358599 47.865 2 0.04846310705414595 0.004965292359378474 0.02906531481102587 ['ENSG00000171223|ENST00000302754|JUNB'] 11828 16194 DHGGVIVAI True PC9_epitope_Rep1 879.48141657207 879.48030993586 67.107 2 0.04845893404350053 0.004965292359378474 0.029067832147603587 ['SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2'] 119765 14842 VAYPKGMYDV True PC9_epitope_Rep5 1141.5477818797299 1141.54668993586 62.091 2 0.048437901903673176 0.004965292359378474 0.02908052257693099 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 98210 6703 SETKIFTA True NCI_RA007_Epitope_Rep5 895.4650978015899 895.46400993586 32.455 2 0.04843699377369059 0.004965292359378474 0.029081070637844948 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 98132 9983 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 43.389 2 0.04843617866394959 0.004965292359378474 0.029081562568410827 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 3967 8229 AHDSSEYAI True PC9_epitope_Rep3 991.42468954159 991.42358993586 36.632 2 0.04843539747364819 0.004965292359378474 0.029082034035049803 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 28401 13900 FRYPTTEEL True PC9_epitope_Rep6 1154.5607890915799 1154.5596899358602 65.306 2 0.048434573502256766 0.004965292359378474 0.029082531328447042 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 34504 19755 GPPGILALLD True H1975_Epitope_Rep1 964.5593325396 964.55878496793 82.22 1 0.04843000022530084 0.004965292359378474 0.029085291586596722 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 83668 9342 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 40.896 1 0.048424998460573306 0.004965292359378474 0.029088310730711015 ['ENSG00000168143|ENST00000306858|FAM83B'] 110122 9317 TEMPGTLQA True H1975_Epitope_Rep3 946.4429824580199 946.44243496793 40.834 1 0.0484221774281312 0.004965292359378474 0.02909001367337436 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 121826 17127 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 70.9 2 0.04842018951558329 0.004965292359378474 0.029091213748678638 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 104425 10746 SQLGIFISK True NCI_RA007_Epitope_Rep3 991.5702315764701 991.56912993586 49.316 2 0.04841626972840646 0.004965292359378474 0.029093580199014635 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 9453 16761 AVVGGVVAV True PC9_epitope_Rep1 769.4697892592098 769.4692449679301 69.296 1 0.04841396069011038 0.004965292359378474 0.029094974289658123 ['ENSG00000165948|ENST00000555523|IFI27L1'] 6122 14069 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 59.393 2 0.04839366641758689 0.004965292359378474 0.029107229590450392 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 90188 3426 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 17.964 2 0.04837500878687779 0.004965292359378474 0.029118500607657968 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 24222 5018 EYSKQMQRF True NCI_RA007_Epitope_Rep5 1215.57064258263 1215.56899490379 26.004 3 0.04837219916343824 0.004965292359378474 0.029120198228812778 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 26976 13000 FLEENNLDY True H1975_Epitope_Rep2 1155.5084191655499 1155.50732993586 55.121 2 0.048363326731712716 0.004965292359378474 0.029125559677434916 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000527623.1_1_19:46891683-46893600:+|nuORF', 'ENST00000487483.6_1_19:46891669-46893605:+|nuORF'] 11217 5105 DEDKEKTFEEK True NCI_RA007_Epitope_Rep2 1396.6358045066397 1396.63414490379 24.481 3 0.0483546823775784 0.004965292359378474 0.029130784147400408 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 6697 16927 AQAGALLQV True PC9_epitope_Rep4 869.49706663621 869.49596993586 73.097 2 0.04835280033321928 0.004965292359378474 0.02913192172682411 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 101817 23240 SLPEVLPIL True PC9_epitope_Rep1 979.5953836951498 979.59428993586 94.183 2 0.04832355532524178 0.004965292359378474 0.029149603603713766 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 103708 4887 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 26.338 2 0.04831001850164527 0.004965292359378474 0.029157791358332304 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 122339 16720 VGDAIPAVEVF True H1975_Epitope_Rep3 1115.58627556343 1115.5851699358602 69.84 2 0.04830863069789283 0.004965292359378474 0.029158630887728142 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5'] 137989 20959 YFQNTQGLIF True PC9_epitope_Rep4 1229.6080736371698 1229.6069699358602 88.78 2 0.04830686906273069 0.004965292359378474 0.029159696591344333 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 14280 14097 DSTLIM[Oxidation]QL True H1975_Epitope_Rep3 935.4633839298699 935.46283496793 59.551 1 0.048293157519430384 0.004965292359378474 0.029167992592553357 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 21267 9091 ERDSQTQAIL True PC9_epitope_Rep1 1159.5833154413099 1159.5822099358602 39.82 2 0.04828669969689432 0.004965292359378474 0.02917190054601331 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 52852 12192 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54346496793 51.886 1 0.048285837698682 0.004965292359378474 0.029172422219744386 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 89648 9155 QYTQALEKF True NCI_RA007_Epitope_Rep3 1126.5658744720197 1126.56476993586 43.099 2 0.04828084581206526 0.004965292359378474 0.029175443428737492 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 90210 3648 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 19.063 2 0.04827802524316025 0.004965292359378474 0.02917715062742972 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 128755 20948 VPYLVGQVV True PC9_epitope_Rep1 972.5644179200399 972.56386496793 85.397 1 0.04826834947540991 0.004965292359378474 0.02918300773034144 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF'] 134584 21615 VYSGGVYLF True PC9_epitope_Rep2 1003.5014833103099 1003.50038993586 88.616 2 0.048266976535178016 0.004965292359378474 0.029183838906951476 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 139413 21207 YLPDSLTQL True PC9_epitope_Rep5 1048.54407639828 1048.54357496793 86.621 1 0.04826419363477985 0.004965292359378474 0.02918552373658843 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 106195 17115 STDPYLDDFYY True H1975_Epitope_Rep2 1397.5663279644898 1397.56522993586 71.108 2 0.04824160347278145 0.004965292359378474 0.029199203523144344 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 99151 12399 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.4914349679301 55.497 1 0.04823832023596251 0.004965292359378474 0.029201192207349236 ['ENSG00000132646|ENST00000379143|PCNA'] 70882 14874 LYEEKFESI True PC9_epitope_Rep4 1156.5652057656798 1156.5641099358602 65.151 2 0.04822812963044704 0.004965292359378474 0.029207365510091027 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.D1423Gfs*6|1|0.12|ENSG00000181555|chr3:47120368-47120369|-/C|frameshift_variant'] 5998 11420 APILVPHTA True PC9_epitope_Rep3 917.5334521449299 917.53234993586 48.927 2 0.048221505914854065 0.004965292359378474 0.029211378671337704 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52'] 34786 20070 GQGEVLVYV True PC9_epitope_Rep5 962.5072969667398 962.5067449679301 82.252 1 0.04821769842574114 0.004965292359378474 0.029213685765834097 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 24028 14992 EYNKSWQTF True PC9_epitope_Rep1 1201.5403880001697 1201.53928993586 62.486 2 0.048208905060392326 0.004965292359378474 0.029219014601159256 ['ENSG00000198440|ENST00000333201|ZNF583'] 31949 16519 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53329496793 68.76 1 0.04820063927719204 0.004965292359378474 0.029224024506436217 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 49403 7428 KEVEQFDVA True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 33.517 2 0.04819828325698757 0.004965292359378474 0.02922545263417353 ['ENST00000488453.1_1_1:38483328-38489297:+|nuORF', 'ENSG00000183520|ENST00000373014|UTP11'] 1737 11351 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 48.711 1 0.04819746039783764 0.004965292359378474 0.029225951433981184 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 25530 10705 FEIGGTIHP True H1975_Epitope_Rep1 969.49198125577 969.49088993586 46.136 2 0.048171376337441514 0.004989748783439963 0.029241766963228187 ['ENSG00000138678|ENST00000264409|GPAT3'] 124778 8098 VHDPAGALQAA True PC9_epitope_Rep4 1048.5301576696397 1048.5290699358602 38.602 2 0.04816771626835609 0.004989748783439963 0.029243986778943916 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 107929 22537 SVVTSIFGV True PC9_epitope_Rep1 907.5014833103099 907.50038993586 91.491 2 0.04815046049098367 0.005010118959474802 0.029254454350085585 ['ENSG00000196305|ENST00000443024|IARS1'] 110362 8117 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 36.171 2 0.04813002348872224 0.005010118959474802 0.029266856001120275 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 96066 13648 RYLTVAAVF True NCI_RA007_Epitope_Rep1 1038.5862159937797 1038.5851099358601 57.1 2 0.048127788506446105 0.005010118959474802 0.029268212524137582 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 121936 14582 VFSGLVSTGLK True PC9_epitope_Rep6 1106.63356010902 1106.6324699358602 67.986 2 0.048122224729618794 0.005010118959474802 0.02927158970257812 ['ENSG00000167658|ENST00000309311|EEF2'] 5219 21288 ALPEDLVEV True PC9_epitope_Rep1 983.5175272972699 983.51642993586 86.71 2 0.04811811011849848 0.005010118959474802 0.029274087469152648 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 117084 22396 TVISILNTI True PC9_epitope_Rep2 972.58554728744 972.58444993586 91.641 2 0.04811641558070676 0.005010118959474802 0.02927511619006713 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 71720 9417 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 41.189 1 0.04811299217084142 0.005010118959474802 0.029277194573621816 ['ENSG00000026025|ENST00000544301|VIM'] 25583 10305 FELFADKVPK True H1975_Epitope_Rep1 1192.6492101731599 1192.64755490379 44.583 3 0.04809992593770743 0.005010118959474802 0.029285128409561174 ['ENSG00000196262|ENST00000468812|PPIA'] 99742 21681 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.6118849679301 88.224 1 0.048081690359350504 0.005010118959474802 0.029296204274684396 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 52818 9235 KPAEFTVDA True PC9_epitope_Rep2 976.4865615221598 976.48546993586 40.861 2 0.048052639950895766 0.005010118959474802 0.02931385650697874 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 49207 5321 KEMQPTHPIRL True H1975_Epitope_Rep2 1348.7285402063599 1348.72690490379 25.52 3 0.048043869166283816 0.005010118959474802 0.029319187857117332 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion'] 105667 13215 SSEITSLYY True H1975_Epitope_Rep2 1061.49170647225 1061.49117496793 55.959 1 0.0480389484684534 0.005010118959474802 0.02932217929680399 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM1|p.H2286Q|1|0.06|ENSG00000009694|chrX:124384052-124384052|G/C|missense_variant', 'TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4', 'nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 134817 21035 VYTWPSGNTF True PC9_epitope_Rep5 1170.53457434374 1170.53346993586 85.97 2 0.04801508269914307 0.005010118959474802 0.029336691862400746 ['JPH2|p.T601Nfs*41|1|0.4|ENSG00000149596|chr20:44115873-44115874|-/T|frameshift_variant', 'ENSG00000149596|ENST00000372980|JPH2', 'nc|ENSG00000149596|Q9BR39-2|JPH2'] 48053 23291 IYLTFPVAM True PC9_epitope_Rep1 1053.55689001145 1053.55637496793 94.376 1 0.04801481141250276 0.005010118959474802 0.02933685686612638 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 138398 5548 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 26.731 2 0.04801313590039255 0.005010118959474802 0.029337875975284818 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 17275 14941 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50708496793 62.731 1 0.04801164358619485 0.005010118959474802 0.0293387836831118 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 90806 5440 RESPFSTSA True NCI_RA007_Epitope_Rep5 980.45632402304 980.45522993586 27.613 2 0.04800844940958664 0.005010118959474802 0.029340726641445384 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 95686 16295 RYFENPQVI True PC9_epitope_Rep5 1164.5927579262 1164.5916699358602 67.672 2 0.04800429546420128 0.005010118959474802 0.02934325358038445 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 107460 19381 SVLVSVSEV True PC9_epitope_Rep3 917.50696261357 917.50586993586 79.772 2 0.047997054004303034 0.005010118959474802 0.029347659186766645 ['ENSG00000221926|ENST00000649191|TRIM16'] 35191 10733 GRADGYVL True PC9_epitope_Rep3 849.43446637965 849.43336993586 46.239 2 0.047980274217806124 0.005010118959474802 0.029357870041740394 ['ENSG00000142937|ENST00000396651|RPS8'] 98928 10118 SHAELETAL True PC9_epitope_Rep2 969.47672511445 969.47562993586 44.257 2 0.04797963795608314 0.005010118959474802 0.029358257282581547 ['ENST00000469694.5_1_2:241381745-241403123:+|nuORF', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENSG00000063660|ENST00000264039|GPC1'] 45548 6791 IQRTPKIQVY True H1975_Epitope_Rep3 1244.7241064489199 1244.72245490379 31.077 3 0.047974379602225836 0.005010118959474802 0.02936145778934857 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 62951 8056 LLPGELAK True NCI_RA007_Epitope_Rep2 839.5116540711899 839.51054993586 35.967 2 0.04796989113973602 0.005010118959474802 0.029364189945625025 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 21260 19570 ERDRLILFL True PC9_epitope_Rep4 1173.6869926642098 1173.6853349037901 83.399 3 0.0479661175894412 0.005010118959474802 0.029366487105034388 ['ENSG00000138246|ENST00000260818|DNAJC13'] 109023 20888 TAIDILTTV True PC9_epitope_Rep4 945.5382627418501 945.53716993586 88.504 2 0.0479524191364203 0.005010118959474802 0.029374827419303084 ['ENSG00000198700|ENST00000361565|IPO9'] 25366 9121 FEADPPGQVAA True H1975_Epitope_Rep2 1100.51383889916 1100.51274993586 40.036 2 0.047946853823029316 0.005010118959474802 0.02937821646620533 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 41295 4512 HVSIVEPK True NCI_RA007_Epitope_Rep2 907.51271670035 907.51160993586 22.183 2 0.04793783525394642 0.005010118959474802 0.029383709141560715 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF'] 47301 11265 IVDSATALY True H1975_Epitope_Rep1 951.49131254943 951.4907649679301 48.307 1 0.04790712302661872 0.005010118959474802 0.02940242098340402 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 111713 16695 TIGGTLSIL True H1975_Epitope_Rep1 873.5171333744499 873.51658496793 69.614 1 0.04790548552261369 0.005010118959474802 0.029403418952244378 ['nc|ENSG00000180068|P47883|OR3A4P'] 1236 6523 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.40686993586 30.004 2 0.04789902583878086 0.005010118959474802 0.029407356068674517 ['ENSG00000162783|ENST00000367577|IER5'] 65360 9385 LRDQGGVVL True PC9_epitope_Rep4 955.5450794577898 955.5439899358599 43.708 2 0.04789825259187472 0.005010118959474802 0.029407827386770863 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 39053 14706 HHSLALTSF True PC9_epitope_Rep3 1011.51377932951 1011.51268993586 61.706 2 0.04789512276048286 0.005010118959474802 0.029409735185153274 ['ENSG00000170892|ENST00000396388|TSEN34'] 2824 8091 AEVDAAMAA True NCI_RA007_Epitope_Rep1 847.3745685450299 847.3740149679301 35.469 1 0.04789467841299317 0.005010118959474802 0.029410006047451826 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 140840 14325 YSDPSVLYM True H1975_Epitope_Rep1 1073.47394823313 1073.4733749679299 60.29 1 0.047890302211361147 0.005010118959474802 0.029412673780885287 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Nfs*41|1|0.31|ENSG00000068024|chr2:239053574-239053593|GTGCGCTGCAGGCAGCGCCA/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 7926 7033 ATAPPAPAY True NCI_RA007_Epitope_Rep3 857.42831837005 857.4272299358599 34.781 2 0.0478858459794493 0.005010118959474802 0.02941539052175314 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 77301 11443 NSDNNTIFV True H1975_Epitope_Rep3 1022.46688870674 1022.46637496793 49.134 1 0.04788432880950838 0.005034178121067048 0.029416315514974572 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 36831 8830 GVLGPIINK True NCI_RA007_Epitope_Rep3 909.56475227321 909.56364993586 41.824 2 0.04787652718970585 0.005034178121067048 0.02942107244069782 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000523568.1_7:102228019-102246337:-|nuORF'] 116309 10166 TTDVDSLSY True H1975_Epitope_Rep3 999.43967089939 999.4390749679301 44.147 1 0.04785217121598527 0.005034178121067048 0.029435927544310844 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'nc|ENSG00000183597|Q6ICL3-6|TANGO2'] 97679 15744 SEHWLVLVP True H1975_Epitope_Rep2 1078.5811306133398 1078.58002993586 65.73 2 0.04783676214792915 0.005034178121067048 0.029445329226517193 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 43871 4992 IHSSSTVL True PC9_epitope_Rep4 842.44978209062 842.44868993586 25.814 2 0.04783002339578452 0.005034178121067048 0.02944944164432933 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 71898 5942 M[Oxidation]EQELAHAV True H1975_Epitope_Rep2 1042.4753455958999 1042.4742499358601 27.838 2 0.04781021118433679 0.00505848097517643 0.029461535279403317 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 39195 13713 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 57.596 2 0.04780764013010259 0.00505848097517643 0.029463105008210193 ['ENSG00000132646|ENST00000379143|PCNA'] 49011 11194 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 51.138 2 0.047791728041328245 0.00505848097517643 0.029472821611593654 ['ENSG00000197747|ENST00000368811|S100A10'] 27980 19527 FQIPPNAEL True PC9_epitope_Rep4 1027.53384606775 1027.53274993586 83.231 2 0.04774176630343052 0.005078770247281872 0.02950334889457928 ['ENST00000597277.1_9:43426178-43426727:-|nuORF', 'ENSG00000004478|ENST00000001008|FKBP4'] 108038 18572 SYADQMFLL True NCI_RA007_Epitope_Rep4 1086.50558271458 1086.5050749679299 80.346 1 0.047724410567822874 0.005078770247281872 0.029513960050212753 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 24374 23017 FAADIISVL True PC9_epitope_Rep1 947.53278343859 947.53168993586 93.332 2 0.0477209969594627 0.005078770247281872 0.02951604750151707 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 1535 6909 AEEPNAAVP True H1975_Epitope_Rep3 896.4239612655998 896.42286993586 31.535 2 0.0477091334368557 0.005078770247281872 0.02952330316903009 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 76938 5985 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 28.408 2 0.047706844522151244 0.005078770247281872 0.029524703239430006 ['ENSG00000241685|ENST00000262942|ARPC1A'] 88604 12962 QTDQMVFNAY True H1975_Epitope_Rep1 1215.52302368387 1215.5224749679298 54.933 1 0.04770102196773145 0.005078770247281872 0.029528265012406078 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 97467 11863 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 50.709 1 0.04768550789703388 0.005078770247281872 0.029537757142971487 ['ENSG00000135900|ENST00000258383|MRPL44'] 107927 10336 SVVTGGVQSV True PC9_epitope_Rep6 931.49746055903 931.49636993586 50.46 2 0.047676904241377605 0.005078770247281872 0.029543022372674598 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 107953 7152 SVYDHQGIFK True NCI_RA007_Epitope_Rep3 1192.58767254576 1192.58602490379 35.25 3 0.047674433418102125 0.005078770247281872 0.029544534610976923 ['ENSG00000153989|ENST00000368494|NUS1'] 90377 6802 REHPLWQA True NCI_RA007_Epitope_Rep4 1035.5250127195497 1035.52390993586 32.789 2 0.04767252166914038 0.005078770247281872 0.02954570472160266 ['ENSG00000198113|ENST00000357503|TOR4A'] 40114 18918 HPYLFPVA True PC9_epitope_Rep1 942.4963383602199 942.49524993586 77.553 2 0.047651386970260966 0.005078770247281872 0.029558643229772717 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 76004 23615 NLVSFLETV True PC9_epitope_Rep5 1020.54916177872 1020.54806993586 95.814 2 0.04760956659859061 0.005078770247281872 0.029584260186516977 ['ENSG00000128791|ENST00000262120|TWSG1'] 57568 9685 LEDSPVISA True H1975_Epitope_Rep1 929.47057710485 929.47002496793 42.178 1 0.047596931908307376 0.005078770247281872 0.029592003409319664 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 96744 13766 SAMEVVPAL True NCI_RA007_Epitope_Rep3 915.4735543103099 915.47244993586 61.475 2 0.04759051614218084 0.005078770247281872 0.029595936027371574 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 13943 19886 DRAIPLVL True PC9_epitope_Rep5 895.5491022090699 895.54800993586 81.544 2 0.04758561745905474 0.005078770247281872 0.029598939044307125 ['ENSG00000103381|ENST00000381774|CPPED1'] 62369 19788 LLGPPPVGV True PC9_epitope_Rep3 847.51673945163 847.51564993586 81.345 2 0.047578703075848834 0.005078770247281872 0.02960317819698729 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 138429 16721 YHISLEHEIL True PC9_epitope_Rep2 1252.64518742188 1252.6435349037902 69.566 3 0.04756147528878263 0.005078770247281872 0.029613742759733275 ['ENSG00000168002|ENST00000301788|POLR2G'] 118380 9880 TYNSSGAYRF True PC9_epitope_Rep4 1164.5199869087598 1164.5188899358602 45.654 2 0.047557442679820684 0.005078770247281872 0.029616216152263904 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 105332 17445 SRPPLVVF True PC9_epitope_Rep2 913.53853752537 913.53744993586 72.355 2 0.04754820557953511 0.005078770247281872 0.029621882400329858 ['nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 103586 12705 SPSPPSVAV True PC9_epitope_Rep5 839.4388830537499 839.43778993586 53.875 2 0.047547705007265746 0.005078770247281872 0.02962218949027497 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 74793 8562 NHDTALTL True PC9_epitope_Rep6 883.43994568291 883.43884993586 42.705 2 0.047535863110712756 0.005078770247281872 0.029629455054715596 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 92208 21552 RLIALLEVL True PC9_epitope_Rep4 1038.68011637862 1038.6790099358602 91.081 2 0.0475272357908685 0.005078770247281872 0.02963474932036642 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 101846 12685 SLPKGVVEV True PC9_epitope_Rep1 926.54368247546 926.54258993586 53.664 2 0.047523500985620235 0.005078770247281872 0.02963704149209011 ['ENSG00000149257|ENST00000358171|SERPINH1'] 100445 20562 SLAGGIIGV True PC9_epitope_Rep5 785.46470387877 785.4641549679301 84.136 1 0.04752349594317801 0.005078770247281872 0.029637044586907697 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 57320 4965 LEAATQVKP True H1975_Epitope_Rep3 955.5338460677499 955.53274993586 24.225 2 0.04752242821190745 0.005078770247281872 0.029637699917388266 ['ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3', 'ENSG00000137100|ENST00000259632|DCTN3'] 44644 5709 ILSGVVTK True NCI_RA007_Epitope_Rep5 815.51165407119 815.51054993586 28.647 2 0.04750602465737408 0.005078770247281872 0.029647769376254293 ['ENSG00000142534|ENST00000270625|RPS11'] 100168 11799 SITSELHAV True PC9_epitope_Rep6 955.4974605590301 955.49636993586 56.574 2 0.04749643661342515 0.005078770247281872 0.02965365648357357 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 70419 11405 LVTTVTEIAG True H1975_Epitope_Rep3 1002.5597264624199 1002.5591749679301 48.985 1 0.047492625663790006 0.005078770247281872 0.029655996714096022 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 72008 6604 METAAAVAA True H1975_Epitope_Rep3 833.3953039896098 833.39475496793 30.354 1 0.04748430862523134 0.005078770247281872 0.02966110461617752 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 104634 17649 SQSSVVYEI True PC9_epitope_Rep1 1010.4920408254198 1010.49147496793 72.68 1 0.047479797342903224 0.005078770247281872 0.029663875543071615 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 142595 19191 YYLTHGLYL True PC9_epitope_Rep4 1141.58079626017 1141.5796899358602 81.917 2 0.04747698692734814 0.005078770247281872 0.029665601877094192 ['nc|ENSG00000101464|Q9H490-2|PIGU', 'ENSG00000101464|ENST00000217446|PIGU'] 36689 23417 GVISGLFEL True PC9_epitope_Rep1 933.5171333744499 933.51602993586 94.857 2 0.04746787219574523 0.005078770247281872 0.02967120133235627 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 139803 7797 YPIEHGIVTN True H1975_Epitope_Rep1 1141.5767735088898 1141.57566993586 34.947 2 0.04746353076426596 0.005078770247281872 0.029673868734895237 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 73722 21128 MYTKLFVGF True PC9_epitope_Rep5 1104.5677890483198 1104.56668993586 86.33 2 0.047458727365254735 0.005078770247281872 0.029676820221235828 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-9|SMPD4', 'nc|ENSG00000136699|Q9NXE4-10|SMPD4', 'nc|ENSG00000136699|Q9NXE4-7|SMPD4', 'nc|ENSG00000136699|Q9NXE4-8|SMPD4', 'ENST00000482171.5_1_2:130912606-130913705:-|nuORF', 'ENST00000461187.5_1_2:130911777-130913705:-|nuORF'] 34654 13940 GQATTAYFL True NCI_RA007_Epitope_Rep5 970.47599683846 970.47488993586 60.305 2 0.04745079397066704 0.005078770247281872 0.029681695528702756 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 108338 21630 SYLDNFIKI True PC9_epitope_Rep3 1111.59136094387 1111.59026993586 88.498 2 0.04743871399907154 0.005103047036781383 0.029689120396958098 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 91950 5112 RKNQGDFSL True NCI_RA007_Epitope_Rep3 1063.5410567065098 1063.53994993586 27.1 2 0.04743478981009092 0.005103047036781383 0.029691532726475265 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF', 'ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 2291 12285 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 52.338 2 0.04742270981586932 0.005103047036781383 0.029698959793114137 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 87230 15030 QPLGTLPQA True PC9_epitope_Rep2 923.5076313199098 923.50708496793 63.069 1 0.04741542150126609 0.005117858373111559 0.029703441619251997 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 98134 9740 SESLIKQIP True H1975_Epitope_Rep3 1013.57571087973 1013.5746099358599 42.487 2 0.0474100069890435 0.005117858373111559 0.029706771570910263 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 6302 7060 APRLQSEVA True PC9_epitope_Rep1 969.5243440132099 969.52324993586 31.963 2 0.04740023212817571 0.005117858373111559 0.029712783997590565 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 17566 8966 EHGPNPIL True PC9_epitope_Rep2 875.45011644379 875.44900993586 39.844 2 0.04739649119467631 0.005117858373111559 0.029715085297042226 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 6736 9532 AQASDLEKI True PC9_epitope_Rep2 973.50802524273 973.50692993586 42.012 2 0.04739042483196276 0.005117858373111559 0.029718817460503165 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 67477 5653 LSSSSFSR True PC9_epitope_Rep5 869.42429561877 869.42318993586 26.743 2 0.0473899595540623 0.005117858373111559 0.02971910372716435 ['LAMP1|p.N181S|1|0.39|ENSG00000185896|chr13:113310847-113310847|A/G|missense_variant'] 85736 9711 QHDDQQPVVL True PC9_epitope_Rep2 1177.5727507576098 1177.57164993586 42.691 2 0.04737581574705273 0.005117858373111559 0.029727807007389365 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 109610 5916 TEAEDM[Oxidation]ISA True H1975_Epitope_Rep2 981.3960922156899 981.3949899358599 27.742 2 0.04737075713234218 0.005117858373111559 0.029730920335337353 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 87485 15936 QQDYFPKAL True PC9_epitope_Rep2 1108.5553097883198 1108.5542099358602 66.545 2 0.04736807646695163 0.005117858373111559 0.029732570270035945 ['ENSG00000100401|ENST00000356244|RANGAP1'] 110933 6847 THAAALSV True PC9_epitope_Rep5 768.41300265908 768.41190993586 31.307 2 0.047367217687322036 0.005117858373111559 0.029733098861329806 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 87696 13856 QQYNSFVSL True NCI_RA007_Epitope_Rep4 1084.5189242796 1084.5178299358602 60.559 2 0.04736188537341868 0.005117858373111559 0.02973638116442425 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 77264 11166 NSATGVPTV True PC9_epitope_Rep1 844.42904664604 844.4284949679301 47.835 1 0.047351873025461 0.005117858373111559 0.02974254512900034 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 109872 6705 TEETATTVVA True H1975_Epitope_Rep3 1020.4975201286799 1020.4969749679301 30.745 1 0.04735012307540112 0.005117858373111559 0.029743622578154688 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 1944 4574 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 22.699 2 0.04734121747955426 0.005117858373111559 0.029749106315250153 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 99644 8887 SIFSKFTSK True NCI_RA007_Epitope_Rep4 1043.56514619603 1043.56404993586 41.01 2 0.047332874624104466 0.005117858373111559 0.02975424435166167 ['nc|ENSG00000072518|Q7KZI7-15|MARK2', 'nc|ENSG00000072518|Q7KZI7-10|MARK2', 'nc|ENSG00000072518|Q7KZI7-13|MARK2', 'nc|ENSG00000072518|Q7KZI7-7|MARK2', 'nc|ENSG00000072518|Q7KZI7-2|MARK2', 'nc|ENSG00000072518|Q7KZI7-5|MARK2', 'nc|ENSG00000072518|Q7KZI7-16|MARK2', 'nc|ENSG00000072518|Q7KZI7-4|MARK2', 'nc|ENSG00000072518|Q7KZI7-9|MARK2', 'nc|ENSG00000072518|Q7KZI7-12|MARK2', 'nc|ENSG00000072518|Q7KZI7-14|MARK2', 'nc|ENSG00000072518|Q7KZI7-3|MARK2', 'nc|ENSG00000072518|Q7KZI7-6|MARK2', 'nc|ENSG00000072518|Q7KZI7-11|MARK2', 'nc|ENSG00000072518|Q7KZI7-8|MARK2', 'ENSG00000072518|ENST00000402010|MARK2'] 98207 6489 SETKIFTA True NCI_RA007_Epitope_Rep3 895.4650978015899 895.46400993586 32.554 2 0.0473321591789821 0.005117858373111559 0.02975468500282806 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 1718 5372 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 25.703 2 0.047324342544650386 0.005117858373111559 0.029759499738299944 ['ENSG00000161847|ENST00000617231|RAVER1'] 38315 10799 HEGLPGLAV True H1975_Epitope_Rep2 891.4814165720699 891.48030993586 46.568 2 0.04732412429799419 0.005117858373111559 0.029759634179471417 ['ENSG00000169710|ENST00000306749|FASN'] 17977 5021 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 24.396 3 0.04732200362978274 0.005117858373111559 0.02976094055112069 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 45371 11235 IQDNKFIEA True PC9_epitope_Rep5 1076.55022440788 1076.54912993586 48.205 2 0.04731131092415131 0.005117858373111559 0.029767528234960476 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 36011 21246 GTYDIFYTA True PC9_epitope_Rep3 1049.47057710485 1049.46948993586 87.016 2 0.04730991059983584 0.005117858373111559 0.029768391058545528 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 75822 21459 NLPDEEIFQQL True PC9_epitope_Rep4 1344.6561460284 1344.65504993586 90.732 2 0.04730339682036624 0.005117858373111559 0.02977240487953022 ['ENSG00000169019|ENST00000381571|COMMD8'] 57923 7252 LEGGQTPIA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 32.829 2 0.04730025438611902 0.005117858373111559 0.02977434143377277 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 96570 16266 SAFDNFKEV True PC9_epitope_Rep1 1055.49237517859 1055.4912699358601 67.386 2 0.04729889421981799 0.005117858373111559 0.029775179683533555 ['FMNL2|p.L1058Qfs*20|1|0.19|ENSG00000157827|chr2:152647799-152647800|TT/-|frameshift_variant', 'nc|ENSG00000157827|Q96PY5|FMNL2', 'ENSG00000157827|ENST00000288670|FMNL2', 'ENST00000492942.1_1_2:153435413-153463948:+|nuORF'] 134833 22243 VYVDDIYVI True PC9_epitope_Rep5 1097.56447748969 1097.5639749679299 90.565 1 0.04729441645373206 0.005117858373111559 0.029777939410499728 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 106921 7625 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4499749679298 34.312 1 0.04729235565325443 0.005117858373111559 0.029779209594804998 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 71141 22904 LYLPSFFTY True PC9_epitope_Rep4 1149.57464825057 1149.5740749679298 96.319 1 0.04728402469216245 0.005117858373111559 0.02978434491293228 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 13380 7098 DLYDAGVK True NCI_RA007_Epitope_Rep5 879.43379767331 879.43270993586 33.982 2 0.047275396041508336 0.005117858373111559 0.029789664559499034 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 117951 13605 TYADTLNHL True PC9_epitope_Rep4 1046.5032742154601 1046.5021699358601 60.225 2 0.04727051951776933 0.005117858373111559 0.029792671356450133 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 78662 9835 NYVKKFQSF True PC9_epitope_Rep2 1159.6025943339098 1159.60093490379 43.166 3 0.047259834329505625 0.005117858373111559 0.02979926063707673 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000278882.8_1_20:29623179-29633907:+|nuORF'] 141296 13328 YTDPDQFVY True H1975_Epitope_Rep2 1146.48695544498 1146.48637496793 56.397 1 0.04725757242970427 0.005117858373111559 0.02980065565832938 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6'] 97310 10221 SEALPSDIAA True H1975_Epitope_Rep3 972.47639076128 972.47528993586 44.363 2 0.047255995739921675 0.005117858373111559 0.029801628112232803 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 133615 15308 VYADQPHIF True PC9_epitope_Rep2 1088.52909504048 1088.5279899358602 64.164 2 0.04725597377820592 0.005117858373111559 0.02980164165774441 ['ENSG00000100439|ENST00000428304|ABHD4'] 114852 12964 TQNEVAAAL True PC9_epitope_Rep5 915.4661604307498 915.46506993586 54.875 2 0.04725263952298384 0.005117858373111559 0.02980369821768305 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 89587 13162 QYNPKFQTL True PC9_epitope_Rep3 1137.58185888933 1137.5807699358602 55.659 2 0.04724825567061745 0.005117858373111559 0.0298064023580573 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 47211 13651 IVAPGKGILAA True PC9_epitope_Rep2 1008.6331661861998 1008.63206993586 57.801 2 0.04724796100619126 0.005117858373111559 0.029806584126998985 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 9813 12294 AYLEAIHNF True NCI_RA007_Epitope_Rep2 1076.52909504048 1076.5279899358602 52.422 2 0.04724142851716768 0.005117858373111559 0.029810614060558783 ['ENSG00000042753|ENST00000263270|AP2S1'] 77820 13905 NVDESLLGY True H1975_Epitope_Rep2 1008.4763907612798 1008.47528993586 58.632 2 0.04722819426462998 0.005117858373111559 0.029818779836204744 ['ENSG00000172890|ENST00000319023|NADSYN1', 'ENST00000531236.1_1_11:71196518-71209628:+|nuORF', 'nc|ENSG00000172890|Q6IA69-2|NADSYN1'] 73297 18837 MTDLYPPELF True H1975_Epitope_Rep2 1224.5736622744 1224.5725699358602 78.213 2 0.047207178213081055 0.005117858373111559 0.029831751202725486 ['ENSG00000148291|ENST00000371964|SURF2'] 2471 4447 AEQLRDEEVHA True H1975_Epitope_Rep2 1295.6105928183101 1295.6089349037902 22.217 3 0.04720054100294268 0.005117858373111559 0.0298358488109858 ['ENSG00000149257|ENST00000358171|SERPINH1'] 134631 15211 VYSPHVLNL True PC9_epitope_Rep6 1040.5654805492 1040.5643899358602 70.605 2 0.04720015209596652 0.005117858373111559 0.029836088925612958 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 112968 10148 TLLQEQGTKTV True PC9_epitope_Rep1 1216.66631678928 1216.66520993586 43.91 2 0.047191046697019394 0.005117858373111559 0.029841711169981876 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF'] 35822 4767 GTLDPVEK True NCI_RA007_Epitope_Rep5 857.44944773745 857.44834993586 25.02 2 0.047174990526639586 0.005117858373111559 0.029851627546949776 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 95057 11081 RTSTGIIGV True PC9_epitope_Rep5 902.5185303567799 902.51742993586 47.612 2 0.04716397380465204 0.005117858373111559 0.029858433224734172 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 31460 5041 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.3913849679301 24.472 1 0.04714770836694905 0.005117858373111559 0.029868483859957846 ['ENSG00000131116|ENST00000300811|ZNF428'] 36273 15920 GVDVTLPRV True PC9_epitope_Rep4 954.5498304850599 954.54872993586 69.163 2 0.04714362083925786 0.005117858373111559 0.02987101007081518 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 35534 12363 GSSGGVIYL True H1975_Epitope_Rep3 851.43888305375 851.43833496793 52.74 1 0.04713209139574633 0.005117858373111559 0.029878136623306618 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 23118 14151 EVISKLYAV True PC9_epitope_Rep6 1020.5855472874398 1020.58444993586 66.301 2 0.04712791810151417 0.005117858373111559 0.029880716581920163 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 117289 14140 TVMDSKIVQV True PC9_epitope_Rep2 1118.60054572858 1118.59944993586 59.66 2 0.047104544269896576 0.005117858373111559 0.02989517009591597 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 141884 15502 YVDPVNKVL True PC9_epitope_Rep3 1045.58079626017 1045.5796899358602 64.778 2 0.04709350087888078 0.005117858373111559 0.02990200107817797 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 67628 20536 LSVPGLVSV True PC9_epitope_Rep4 869.52221875489 869.52112993586 87.142 2 0.04708968090347902 0.005117858373111559 0.029904364278353922 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 111258 18967 THLESLVEL True PC9_epitope_Rep2 1039.5549754351498 1039.5538699358601 78.321 2 0.04708638988363786 0.005117858373111559 0.029906400376854336 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 78475 14692 NYNEKIYEL True PC9_epitope_Rep2 1184.5713537752797 1184.5702499358601 61.778 2 0.0470846185271613 0.005117858373111559 0.029907496336158138 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 119311 18118 VAMLPGLAL True NCI_RA007_Epitope_Rep4 883.5201105799099 883.51956496793 78.397 1 0.04708254985926637 0.005117858373111559 0.029908776290671093 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 103789 16116 SPVVPQISA True PC9_epitope_Rep5 896.4967322830399 896.49618496793 66.981 1 0.04706622741104995 0.005117858373111559 0.0299188772437336 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 74553 13365 NFTNVAATF True NCI_RA007_Epitope_Rep3 983.4712458111899 983.47014993586 59.835 2 0.047044858994641066 0.005117858373111559 0.029932105408205158 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 17392 12837 EHDPQYAVI True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 54.396 2 0.047042990420110335 0.005117858373111559 0.029933262399952084 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 98939 18432 SHALVTLTL True PC9_epitope_Rep2 953.5545815123301 953.55348993586 76.23 2 0.04703327373218217 0.005117858373111559 0.029939279458705476 ['nc|ENSG00000167702|Q96AC6|KIFC2', 'KIFC2|p.S598C|1|0.19|ENSG00000167702|chr8:144472638-144472638|C/G|missense_variant', 'ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2'] 134667 9333 VYSRDPNYL True PC9_epitope_Rep4 1125.5454733806098 1125.54436993586 43.506 2 0.04702546557527865 0.005117858373111559 0.029944115437122994 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 138122 21752 YGIENEVFL True PC9_epitope_Rep2 1082.52842633414 1082.52732993586 89.14 2 0.04702198643902359 0.005117858373111559 0.02994627046171483 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 125315 7044 VIPELNGK True NCI_RA007_Epitope_Rep1 868.50181766348 868.50072993586 31.395 2 0.04701568056711342 0.005117858373111559 0.029950176755677405 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 8212 9767 ATFTGILGK True NCI_RA007_Epitope_Rep3 906.5174677276199 906.51636993586 45.486 2 0.04701340281719645 0.005117858373111559 0.02995158786289887 ['nc|ENSG00000167995|O76090-3|BEST1', 'ENST00000534553.5_1_11:61722629-61730618:+|nuORF'] 90867 8759 REVDPLRIPP True H1975_Epitope_Rep3 1190.6771562565 1190.6760499358602 38.697 2 0.04701153172481359 0.005117858373111559 0.029952747082549778 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 118543 16485 TYQLGFHSI True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 71.38 2 0.04700286300252512 0.005117858373111559 0.02995811823629664 ['ENSG00000142507|ENST00000270586|PSMB6'] 13929 12203 DRAGSIVL True PC9_epitope_Rep1 829.46576650793 829.46466993586 51.797 2 0.04699566777067048 0.005117858373111559 0.029962577061893814 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 129191 11822 VQSNRILGV True PC9_epitope_Rep3 984.5716285587998 984.57052993586 50.49 2 0.04699202556164492 0.005117858373111559 0.029964834333048168 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 100446 18500 SLAGGIIGV True PC9_epitope_Rep6 785.46470387877 785.4641549679301 83.802 1 0.04698872704776878 0.005117858373111559 0.029966878728142056 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 73003 15495 MRAFADAL True PC9_epitope_Rep1 893.4429228883698 893.44182993586 64.423 2 0.04698864343634802 0.005117858373111559 0.029966930551504883 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 114261 11962 TPNRATFVV True PC9_epitope_Rep3 1003.5450794577899 1003.5439899358599 51.036 2 0.04698690930700612 0.005117858373111559 0.029968005403619647 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 78065 23249 NVVEALIAL True PC9_epitope_Rep1 940.5593325395998 940.55822993586 94.215 2 0.0469830097686549 0.005117858373111559 0.029970422549524894 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 119871 8095 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep2 964.4688036634799 964.46770993586 36.121 2 0.046979324670977214 0.005117858373111559 0.029972706932355254 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 29163 20076 FTQDSNYLL True PC9_epitope_Rep5 1099.51858992643 1099.51748993586 82.275 2 0.04697886418559169 0.005117858373111559 0.029972992396947822 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 142118 22038 YVPPELITL True PC9_epitope_Rep2 1043.59029831471 1043.58920993586 90.241 2 0.04696434798233922 0.005117858373111559 0.029981992533430545 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 86989 3935 QLYWSHPRK True NCI_RA007_Epitope_Rep5 1213.6356257976897 1213.63399490379 21.462 3 0.04695971723181305 0.005117858373111559 0.029984864131841857 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 90780 6213 RESEGFEEHVP True H1975_Epitope_Rep3 1314.5840437173 1314.5829499358601 28.911 2 0.046953310461004046 0.005117858373111559 0.029988837469476233 ['ENSG00000119801|ENST00000261353|YPEL5'] 106806 19516 SVAGGFVGL True PC9_epitope_Rep4 805.4334037504899 805.4328549679301 83.187 1 0.04694471765416857 0.005117858373111559 0.029994167271459617 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6'] 34731 5215 GQEDHYNNL True PC9_epitope_Rep6 1088.45230127176 1088.45120993586 27.827 2 0.04693683116297032 0.005117858373111559 0.029999059711159237 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 140439 14909 YRGQFPEL True PC9_epitope_Rep2 1008.5028802926398 1008.50178993586 62.611 2 0.04693576062835996 0.005117858373111559 0.029999723879307157 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 35079 12412 GQVIKGIGV True PC9_epitope_Rep5 869.5334521449298 869.53234993586 52.741 2 0.046909060182164494 0.005166560055109974 0.03001629326671205 ['ENSG00000171497|ENST00000307720|PPID'] 89253 15913 QVVGKLIEV True PC9_epitope_Rep1 983.6015317047498 983.60042993586 66.02 2 0.04690826187889785 0.005166560055109974 0.030016788791454082 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 6638 18162 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 75.164 2 0.04690418059836044 0.005166560055109974 0.030019322247168797 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 58591 7593 LEQQSEITP True H1975_Epitope_Rep2 1043.51350454599 1043.5124099358602 34.158 2 0.04690181894182775 0.005166560055109974 0.030020788332544335 ['ENSG00000135093|ENST00000257548|USP30', 'ENST00000467307.1_1_12:109509452-109519261:+|nuORF'] 58575 11864 LEQNIQLPAA True H1975_Epitope_Rep2 1095.59242357303 1095.5913299358601 50.713 2 0.04688152249207527 0.0051907796009741936 0.030033390720036513 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 41830 20492 IAVNAVLTV True PC9_epitope_Rep2 898.5487678559 898.54766993586 84.253 2 0.04688041308338103 0.0051907796009741936 0.030034079704688455 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 40582 6282 HRGTGLVL True PC9_epitope_Rep4 851.49773534255 851.49662993586 31.221 2 0.04687673024521349 0.0051907796009741936 0.030036366986618584 ['ENSG00000099812|ENST00000215582|MISP'] 103862 7469 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 36.084 2 0.04686689929000099 0.00521448248720976 0.03004247340543862 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 103784 15912 SPVVPQISA True PC9_epitope_Rep2 896.4967322830399 896.49562993586 66.457 2 0.046860654184232096 0.00521448248720976 0.030046353074435015 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 90270 9692 REEFPTLQA True H1975_Epitope_Rep3 1089.5454733806098 1089.54436993586 42.301 2 0.04685994914701856 0.00521448248720976 0.03004679109508734 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 87694 3580 QQYESVAAK True NCI_RA007_Epitope_Rep5 1022.5032742154598 1022.50216993586 19.699 2 0.04685277625775692 0.00521448248720976 0.030051247740050354 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 73883 19865 NAVAALSEI True PC9_epitope_Rep5 886.47599683846 886.47544496793 81.461 1 0.046850302776990385 0.00521448248720976 0.0300527846939927 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 35226 15961 GRAPQVLVL True PC9_epitope_Rep1 951.5865503469499 951.58544993586 66.204 2 0.04683099142270155 0.00521448248720976 0.030064786642963685 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 21337 10687 ERFHHVTVL True PC9_epitope_Rep5 1136.60907669668 1136.60743490379 46.098 3 0.04682936180531765 0.00521448248720976 0.030065799639721277 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 72515 22853 MLFPGSIAL True PC9_epitope_Rep3 947.51502519947 947.51392993586 93.176 2 0.04679876241070417 0.0052348300523483 0.030084826342670765 ['ENSG00000101367|ENST00000375571|MAPRE1'] 48304 10029 IYQRHVYNL True PC9_epitope_Rep5 1204.6352914445197 1204.6336349037902 43.556 3 0.04679173072895832 0.0052348300523483 0.030089200150432142 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 9226 13645 AVNPKFLAV True PC9_epitope_Rep6 957.5647522732099 957.56364993586 64.26 2 0.04678711192926182 0.0052348300523483 0.030092073417423617 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 72842 7499 MPNGDHIVSA True PC9_epitope_Rep6 1039.47567956863 1039.4745899358602 38.095 2 0.04678661132473778 0.0052348300523483 0.030092384848538586 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 21760 11573 ERTSFNYAM True PC9_epitope_Rep4 1117.4862442523297 1117.4851499358601 52.275 2 0.04678091469899465 0.0052348300523483 0.030095928978051655 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 26558 8738 FIISRPTKL True H1975_Epitope_Rep3 1073.65971528721 1073.65860993586 38.614 2 0.04677906955547736 0.0052348300523483 0.03009707700494893 ['ENSG00000111331|ENST00000228928|OAS3'] 117729 18553 TVVAVVAGV True PC9_epitope_Rep5 813.4960040070499 813.49490993586 76.387 2 0.04676328787805841 0.0052348300523483 0.030106897767868377 ['ENSG00000105281|ENST00000542575|SLC1A5'] 98944 7500 SHANSAVVL True PC9_epitope_Rep1 896.47158016436 896.47048993586 33.666 2 0.046760444198080266 0.0052348300523483 0.030108667660443112 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 47130 20909 ITVGSLVTV True PC9_epitope_Rep1 887.5327834385901 887.5322349679301 85.247 1 0.04675862086398086 0.0052348300523483 0.030109802543242938 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 91891 8413 RKLDVVVRF True NCI_RA007_Epitope_Rep4 1130.69241239782 1130.69077490379 39.174 3 0.0467478995467887 0.0052348300523483 0.03011647649137214 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 109095 17115 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.57388993586 71.081 2 0.04674277298083284 0.0052348300523483 0.030119668207777013 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 103972 22141 SQAPFIVAL True PC9_epitope_Rep1 944.5331177917599 944.53202993586 89.978 2 0.04673821626573987 0.0052348300523483 0.0301225053960394 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 14148 10845 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45337496793 46.745 1 0.04673671901553924 0.0052348300523483 0.03012343769403192 ['ENSG00000149823|ENST00000279281|VPS51'] 105434 6850 SRTPGQVL True PC9_epitope_Rep3 856.4766655447999 856.47556993586 31.363 2 0.04672958494182201 0.0052348300523483 0.0301278802438574 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 35751 15455 GTIDEIQKL True PC9_epitope_Rep3 1015.5549754351499 1015.55386993586 64.6 2 0.046723668020986396 0.0052348300523483 0.030131565285534873 ['ENSG00000167986|ENST00000301764|DDB1'] 21272 8427 ERDSTEVEI True PC9_epitope_Rep2 1076.49858275784 1076.4974899358601 37.784 2 0.046718170489334084 0.0052348300523483 0.030134989490883893 ['nc|ENSG00000116641|Q96N67-7|DOCK7', 'nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 108130 17767 SYDPTIENTF True PC9_epitope_Rep6 1185.51898384925 1185.51788993586 80.974 2 0.04670703938681662 0.0052348300523483 0.0301419236915985 ['ENSG00000106615|ENST00000262187|RHEB'] 14145 10664 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep1 1086.45394144498 1086.45337496793 45.977 1 0.0466908682701612 0.0052348300523483 0.030152000125541176 ['ENSG00000149823|ENST00000279281|VPS51'] 119056 10342 VAGGAVYL True H1975_Epitope_Rep2 748.4119400299201 748.41139496793 44.788 1 0.04668636674622744 0.0052348300523483 0.030154805615116156 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 107818 17435 SVVAAVQGL True PC9_epitope_Rep4 842.48616759934 842.48506993586 75.058 2 0.04667308275371088 0.0052348300523483 0.030163085960919593 ['ENSG00000110092|ENST00000227507|CCND1'] 86693 9173 QLIVGVNK True PC9_epitope_Rep1 869.53345214493 869.53234993586 40.133 2 0.04667060289864568 0.0052348300523483 0.030164631958681354 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 110220 6700 TEQPVTPEP True H1975_Epitope_Rep2 996.47639076128 996.47584496793 30.681 1 0.04666998996512727 0.0052348300523483 0.030165014086131377 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 108275 19294 SYIEHIFEI True PC9_epitope_Rep6 1149.57062549929 1149.57007496793 86.861 1 0.046668813070298715 0.0052348300523483 0.030165747821812736 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 25739 7466 FESSGIHVAA True H1975_Epitope_Rep2 1016.4927095317599 1016.49160993586 33.665 2 0.046660829641753526 0.0052348300523483 0.030170725512051435 ['ENSG00000084774|ENST00000264705|CAD'] 6421 6013 APRQPGLMA True PC9_epitope_Rep6 939.4960210903898 939.49492993586 31.465 2 0.04664781677793887 0.0052348300523483 0.030178840629870224 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 114192 7002 TPLHVTSPSSA True PC9_epitope_Rep2 1095.55603806431 1095.5549499358601 32.335 2 0.04660868084257694 0.0052348300523483 0.030203258348889633 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 120213 16009 VEAQPPWLP True H1975_Epitope_Rep2 1035.5389314481897 1035.5378299358601 66.777 2 0.04660843707754258 0.0052348300523483 0.030203410493788243 ['nc|ENSG00000100299|P15289-2|ARSA', 'nc|ENSG00000100299|P15289|ARSA', 'ENSG00000100299|ENST00000216124|ARSA', 'ENST00000551731.1_1_22:51065210-51065465:-|nuORF'] 76585 14585 NQLKYLTRL True PC9_epitope_Rep5 1147.67134260007 1147.66969490379 61.102 3 0.04660435387938662 0.0052348300523483 0.030205959105351548 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 63004 21447 LLPQGLPGL True PC9_epitope_Rep2 906.5538532363399 906.55274993586 87.97 2 0.04659679652578876 0.0052348300523483 0.03021067668486049 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.G181Efs*69|1|0.35|ENSG00000204267|chr6:32837603-32837603|C/-|frameshift_variant'] 97464 11587 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 49.634 1 0.046593178644211836 0.0052348300523483 0.03021293533140666 ['ENSG00000135900|ENST00000258383|MRPL44'] 135109 9461 WEEETVPTT True H1975_Epitope_Rep1 1090.4818700645399 1090.48127496793 41.309 1 0.04657208127520743 0.0052348300523483 0.030226109417901183 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 52469 6690 KKVAAIEAL True NCI_RA007_Epitope_Rep2 941.5909670210499 941.58986993586 30.635 2 0.04656146097845098 0.0052348300523483 0.030232743105004286 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4'] 30483 10603 GAGAPVYL True H1975_Epitope_Rep3 746.3962899657799 746.39574496793 45.853 1 0.04654715493319856 0.0052348300523483 0.03024168103678594 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 99159 13966 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 58.743 2 0.046529333027846675 0.005245869490611364 0.03025281883411564 ['ENSG00000132646|ENST00000379143|PCNA'] 111503 18190 THYDHVLIEL True PC9_epitope_Rep5 1238.6295373577398 1238.62789490379 74.977 3 0.04651596720329454 0.005245869490611364 0.030261174189426997 ['ENSG00000076003|ENST00000264156|MCM6'] 43872 6194 IHSSSTVL True PC9_epitope_Rep5 842.44978209062 842.44868993586 28.809 2 0.04651452748082275 0.005245869490611364 0.03026207432268305 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 21148 7071 ERAQGVVL True PC9_epitope_Rep4 870.4923156089399 870.49120993586 34.463 2 0.046514496702368784 0.005245869490611364 0.030262093566032683 ['ENSG00000136950|ENST00000353214|ARPC5L'] 142769 16260 YYQSSVQYL True PC9_epitope_Rep6 1149.5342399905699 1149.5331499358601 74.908 2 0.046471055810307006 0.005245869490611364 0.030289264553270596 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 87609 10741 QQPQPLPPP True PC9_epitope_Rep1 1000.5341804209198 1000.53308993586 46.202 2 0.04644404813681681 0.005245869490611364 0.03030616794512598 ['nc|ENSG00000204540|Q9UIG5-2|PSORS1C1', 'ENSG00000204540|ENST00000259881|PSORS1C1'] 128250 17950 VPPAVTGITFL True H1975_Epitope_Rep1 1113.64339651673 1113.6422899358602 74.787 2 0.04642793517667702 0.005245869490611364 0.030316256602720013 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 134408 22761 VYPGLAVFF True PC9_epitope_Rep4 1011.5429541994698 1011.54184993586 95.768 2 0.04642560085083585 0.005245869490611364 0.03031771841913135 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 109134 12954 TALVELVK True PC9_epitope_Rep4 871.5378688190299 871.53676993586 57.717 2 0.046422023935737446 0.005245869490611364 0.03031995849886665 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 100518 22954 SLASLLVSV True PC9_epitope_Rep5 887.5327834385901 887.5322349679301 93.28 1 0.046413798182049694 0.005245869490611364 0.0303251105177542 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 104837 5678 SRAPDGAAL True PC9_epitope_Rep1 856.4402800360799 856.43918993586 26.663 2 0.046402768753042535 0.005245869490611364 0.030332019773793805 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 21726 7112 ERSSYYKSL True PC9_epitope_Rep1 1131.55603806431 1131.55438490379 32.165 3 0.04639052951311791 0.005245869490611364 0.03033968853404129 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 116324 17090 TTEFLYNLY True H1975_Epitope_Rep3 1162.5546410819798 1162.5540749679299 71.353 1 0.04636637330007873 0.005245869490611364 0.030354829171760397 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF', 'ENST00000474114.5_1_21:45744937-45745285:+|nuORF', 'ENST00000495274.1_1_21:45742848-45745285:+|nuORF'] 6983 7160 AQLGEDIR True PC9_epitope_Rep3 900.46649478392 900.46538993586 32.554 2 0.046358260228045026 0.005245869490611364 0.0303599157865044 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 26992 18970 FLEKLLPPV True PC9_epitope_Rep6 1054.6426682407398 1054.6415699358602 85.613 2 0.04635268180139435 0.005245869490611364 0.030363413704562234 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 99138 14015 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.4914349679301 58.99 1 0.04634095477926689 0.005245869490611364 0.03037076822560358 ['ENSG00000132646|ENST00000379143|PCNA'] 4178 9856 AHVQNGIAL True PC9_epitope_Rep1 921.5032146458099 921.50210993586 42.77 2 0.04634019209380504 0.005245869490611364 0.030371246593174746 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 142814 15182 YYSPHGHILVL True PC9_epitope_Rep2 1297.68190728377 1297.68025490379 63.656 3 0.046323038371104436 0.005245869490611364 0.030382007424327333 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 26641 18757 FIPPDGNFRL True PC9_epitope_Rep4 1174.61349337078 1174.6123899358602 80.231 2 0.046317145153743564 0.005245869490611364 0.030385705122282388 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 61011 19221 LIENVASL True PC9_epitope_Rep3 857.4858332461699 857.48472993586 79.153 2 0.04630952826146831 0.005245869490611364 0.030390484930233996 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 65125 9221 LQNEPLPERL True NCI_RA007_Epitope_Rep3 1207.6560864587498 1207.6549899358602 43.367 2 0.04630048734309587 0.005245869490611364 0.030396159217813135 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 108029 18483 SYADAFQFL True NCI_RA007_Epitope_Rep3 1060.4865615221602 1060.48546993586 80.88 2 0.04628809562425365 0.005245869490611364 0.03040393806906436 ['ENSG00000242732|ENST00000609883|RTL5'] 36275 17057 GVDVTLPRV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 70.628 2 0.04628551317413748 0.005245869490611364 0.030405559413647282 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 43679 12168 IHDGM[Oxidation]NLEL True PC9_epitope_Rep5 1056.49099566004 1056.4898899358602 51.794 2 0.046254940440482305 0.005245869490611364 0.030424759771649074 ['ENSG00000198258|ENST00000586895|UBL5'] 14166 17784 DSDPFSSFY True H1975_Epitope_Rep1 1063.41345615155 1063.4128749679298 74.032 1 0.04625187221879169 0.005245869490611364 0.030426687276014046 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF'] 107192 22501 SVINFLDQL True PC9_epitope_Rep4 1047.5600608155898 1047.5594749679299 94.78 1 0.04622605883936817 0.005245869490611364 0.030442907923294075 ['ENSG00000196976|ENST00000357360|LAGE3'] 110238 9702 TEQYPQGLGP True H1975_Epitope_Rep2 1088.5138388991597 1088.51274993586 42.302 2 0.04622507051320325 0.005245869490611364 0.030443529121251037 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'ENST00000591718.1_1_19:55966993-55972941:-|nuORF'] 132533 16852 VVDPNDPQML True PC9_epitope_Rep1 1126.53286009158 1126.5317699358602 69.645 2 0.046219264753826615 0.005245869490611364 0.030447178473056162 ['ENSG00000151883|ENST00000281631|PARP8'] 71874 9018 MEMPSQPAP True H1975_Epitope_Rep1 986.4201388384598 986.41904993586 39.594 2 0.04621915324515413 0.005245869490611364 0.03044724856834636 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.E805Ffs*3|1|0.08|ENSG00000048028|chr11:113805034-113805035|-/AGGTGAA|frameshift_variant'] 106932 8797 SVDSHFQEV True PC9_epitope_Rep4 1046.4668887067398 1046.4657899358601 41.356 2 0.046214970501072754 0.005245869490611364 0.03044987797970533 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 1711 10216 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 44.3 1 0.04618577586848322 0.005245869490611364 0.030468236292562796 ['ENSG00000010292|ENST00000315579|NCAPD2'] 98488 18232 SFITSSWTF True NCI_RA007_Epitope_Rep3 1074.5022115863 1074.50110993586 79.832 2 0.04618564158880751 0.005245869490611364 0.03046832075360958 ['ENSG00000116209|ENST00000234831|TMEM59', 'TMEM59|p.A158S|1|0.12|ENSG00000116209|chr1:54043444-54043444|C/A|missense_variant'] 48987 7630 KEFIKIVEA True NCI_RA007_Epitope_Rep3 1075.62774645259 1075.62664993586 37.141 2 0.046145307563720164 0.005245869490611364 0.030493699980137404 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 71768 4434 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 22.166 2 0.046141998122465375 0.005245869490611364 0.030495783198088967 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 110250 9436 TERIRSIEAL True PC9_epitope_Rep2 1186.6669854956199 1186.6653449037901 41.634 3 0.04611495949194828 0.005245869490611364 0.030512808121623495 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 87244 20031 QPLPVILHV True PC9_epitope_Rep3 1014.6226015025001 1014.62150993586 82.299 2 0.0461096948191214 0.005245869490611364 0.03051612401117467 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 78588 21803 NYSGAAEYLYF True PC9_epitope_Rep2 1296.56626839484 1296.56567496793 89.338 1 0.04607845443829739 0.005245869490611364 0.030535806945784644 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 32116 12749 GETIFVTAP True NCI_RA007_Epitope_Rep3 933.48074786573 933.4801949679301 57.385 1 0.046073092845836626 0.005245869490611364 0.03053918613535105 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 9987 17016 AYPHNLMTF True PC9_epitope_Rep4 1092.50625142092 1092.5051499358601 73.445 2 0.04606899001844606 0.005245869490611364 0.03054177220104496 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 74231 7067 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.42834993586 32.112 2 0.046045151676142294 0.005245869490611364 0.030556801655484037 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 25679 5152 FEQGGARVV True H1975_Epitope_Rep1 961.4981292653698 961.49702993586 24.883 2 0.04603820143514652 0.005245869490611364 0.030561184834114838 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 9960 19529 AYNPMARDLF True PC9_epitope_Rep1 1196.5648289262 1196.56372993586 79.94 2 0.046035599976034194 0.005245869490611364 0.030562825590874976 ['ENSG00000198793|ENST00000361445|MTOR'] 121799 17237 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 71.119 2 0.04602455694845496 0.005245869490611364 0.0305697913665072 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 74844 11403 NHFMDNTTL True PC9_epitope_Rep6 1091.47059418819 1091.46948993586 54.92 2 0.046013321067134655 0.005245869490611364 0.030576880233751342 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 62745 15755 LLLPGELAK True PC9_epitope_Rep4 952.5957180483199 952.59462993586 68.525 2 0.046012646414443824 0.005245869490611364 0.03057730592742947 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 96418 18177 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41156993586 74.707 2 0.04601166078181602 0.005245869490611364 0.03057792785326897 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 1129 6264 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.4125149679301 29.041 1 0.04600970397374533 0.005245869490611364 0.030579162615769446 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 5713 22211 APALLLIPAA True PC9_epitope_Rep5 948.60080342876 948.59970993586 90.445 2 0.04598832023753768 0.005245869490611364 0.03059265881153652 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 103849 8205 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 36.54 2 0.045970685829714704 0.005245869490611364 0.03060379261144179 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 95054 9514 RTSTGIIGV True PC9_epitope_Rep4 902.5185303567799 902.51742993586 44.206 2 0.04596443932953475 0.005245869490611364 0.030607737311583373 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 142516 8484 YYINGKTGL True NCI_RA007_Epitope_Rep5 1027.53384606775 1027.53274993586 39.317 2 0.0459455106042701 0.005245869490611364 0.03061969365675317 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 44516 19412 ILLPRIIEA True PC9_epitope_Rep4 1036.6644663144798 1036.6633699358601 82.779 2 0.045945385827296896 0.005245869490611364 0.03061977248594554 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 40573 4171 HRGTGIAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 22.986 2 0.04594156038562457 0.005245869490611364 0.030622189336959205 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 48176 23953 IYPPLLGALSF True PC9_epitope_Rep2 1189.6746966450098 1189.67358993586 97.618 2 0.04593558026412126 0.005245869490611364 0.03062596781745491 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 106512 18289 STLPDVTEV True PC9_epitope_Rep5 959.48114178855 959.48004993586 75.363 2 0.04593031642801557 0.005245869490611364 0.03062929406157573 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 24544 4263 FAGDDAPRA True NCI_RA007_Epitope_Rep5 918.4195445915 918.4184499358599 22.969 2 0.04592383672021666 0.005245869490611364 0.03063338906008107 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 6985 5668 AQLGEDIR True PC9_epitope_Rep6 900.46649478392 900.46538993586 29.909 2 0.04591889873710342 0.005245869490611364 0.030636510055974082 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 108079 16027 SYANVQDGF True PC9_epitope_Rep3 999.4297749220299 999.42866993586 66.797 2 0.04591885201135761 0.005245869490611364 0.03063653958979267 ['ENSG00000152766|ENST00000371930|ANKRD22'] 39199 13069 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45884993586 55.547 2 0.04591461737922319 0.005245869490611364 0.03063921626714717 ['ENSG00000132646|ENST00000379143|PCNA'] 110401 3297 TEVSKTPEA True H1975_Epitope_Rep1 960.47639076128 960.47528993586 16.742 2 0.04590040796210303 0.005245869490611364 0.030648199439385605 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 115878 9231 TSERGSFSLY True H1975_Epitope_Rep1 1145.53530261973 1145.5342099358602 40.416 2 0.0458955114524779 0.005245869490611364 0.030651295545399727 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12'] 6180 8561 APNLQNQQV True PC9_epitope_Rep4 1010.5145076055 1010.51397496793 40.41 1 0.0458867721658533 0.005245869490611364 0.03065682216092612 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 142292 8492 YYDKHFTEF True NCI_RA007_Epitope_Rep3 1248.54513902744 1248.5440499358601 40.477 2 0.0458830442344858 0.005245869490611364 0.030659179926390962 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 52497 8617 KKWTSVIRL True NCI_RA007_Epitope_Rep4 1129.69716342509 1129.69552490379 39.928 3 0.045879134402181464 0.005245869490611364 0.03066165290923023 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 11724 10782 DHARTITVAL True PC9_epitope_Rep4 1095.60365696307 1095.60254993586 49.231 2 0.04587314722717378 0.005245869490611364 0.03066544016084013 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 85015 5790 QEGPPTPEA True H1975_Epitope_Rep2 924.4188758851599 924.4183249679301 27.266 1 0.045856549465215814 0.005245869490611364 0.030675941417346014 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2', 'nc|ENSG00000114859|P51788-5|CLCN2'] 8286 18884 ATIGELAQV True PC9_epitope_Rep3 900.4916469025999 900.49054993586 77.86 2 0.04585281641119433 0.005245869490611364 0.030678303725762603 ['ENSG00000198793|ENST00000361445|MTOR'] 139440 21157 YLPPGFLSA True PC9_epitope_Rep5 963.50656869075 963.50546993586 86.433 2 0.04585062602907045 0.005245869490611364 0.030679689893185595 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 130074 11921 VSDGIIAPGY True H1975_Epitope_Rep2 990.5022115862998 990.5016649679301 50.934 1 0.04584187491357975 0.005245869490611364 0.03068522852614708 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000446622.5_1_2:216199652-216212358:+|nuORF'] 84485 14470 QALLDLHAL True NCI_RA007_Epitope_Rep2 992.5654805492001 992.5649349679301 60.947 1 0.045781028750882885 0.005245869490611364 0.03072376289218334 ['ENSG00000087086|ENST00000331825|FTL'] 98328 15638 SEWDGIVTV True NCI_RA007_Epitope_Rep5 1004.4814761417199 1004.48097496793 66.859 1 0.04577904958952846 0.005245869490611364 0.03072501702973093 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 88231 10931 QSDGGGLLY True H1975_Epitope_Rep2 908.4239612655999 908.42286993586 47.079 2 0.0457757829118294 0.005245869490611364 0.03072708712838145 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'DYM|p.G248V|1|0.16|ENSG00000141627|chr18:49331884-49331884|C/A|missense_variant', 'ENST00000418472.6_1_18:46856042-46938282:-|nuORF'] 48373 9431 IYTIDGSRK True PC9_epitope_Rep2 1051.56620882519 1051.5651099358602 41.615 2 0.045773300005346865 0.005245869490611364 0.03072866063255463 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2', 'nc|ENSG00000077279|O43602-2|DCX', 'nc|ENSG00000077279|O43602|DCX', 'ENSG00000077279|ENST00000636035|DCX'] 1182 3753 AEAQPPSHPP True H1975_Epitope_Rep2 1029.48795850449 1029.48686993586 19.44 2 0.045768799284088994 0.005245869490611364 0.030731513077855366 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 73526 23029 MVLHIPDIFL True PC9_epitope_Rep5 1196.66275206232 1196.6616499358602 93.573 2 0.04576422423655119 0.005245869490611364 0.030734412869405797 ['ENST00000462685.1_1_2:74159806-74173970:+|nuORF', 'nc|ENSG00000114956|Q16854-6|DGUOK', 'DGUOK|p.A86Sfs*43|1|0.3|ENSG00000114956|chr2:73939017-73939018|-/A|frameshift_variant'] 121546 21664 VFCPPMKFEF True PC9_epitope_Rep1 1243.5769738330298 1243.57586993586 88.159 2 0.04576329461141564 0.005245869490611364 0.03073500212109667 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 45232 10408 IPTENSMTA True PC9_epitope_Rep5 962.43789707758 962.43678993586 45.02 2 0.045760305124249216 0.005245869490611364 0.030736897103586014 ['ENSG00000046604|ENST00000261590|DSG2'] 71976 6986 MESRSFYTA True H1975_Epitope_Rep2 1090.4753452154598 1090.4742499358601 31.795 2 0.045755068742803814 0.005245869490611364 0.03074021660130909 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 98157 5382 SESPVTPSA True H1975_Epitope_Rep2 873.40797684829 873.4074249679301 25.738 1 0.04575074374544475 0.005245869490611364 0.030742958584757504 ['ENSG00000059691|ENST00000263985|GATB', 'ENST00000513504.1_1_4:152592328-152612815:-|nuORF'] 41798 5561 IASNAGSIA True NCI_RA007_Epitope_Rep5 802.41848196234 802.41793496793 28.075 1 0.04574386347569766 0.005245869490611364 0.030747321018487143 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF'] 119694 15182 VAVPLYDTL True NCI_RA007_Epitope_Rep3 989.54334812229 989.54279496793 67.238 1 0.0457365750028741 0.005245869490611364 0.03075194287065411 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 17270 15010 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 62.99 2 0.04573200530817034 0.005245869490611364 0.030754840972719053 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 62132 4963 LLEGEESR True PC9_epitope_Rep1 931.4610750503099 931.45996993586 23.949 2 0.04572424653960266 0.005245869490611364 0.03075976214000773 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 107821 16333 SVVADTPEL True PC9_epitope_Rep2 929.47057710485 929.46948993586 68.072 2 0.045712449445297614 0.005245869490611364 0.0307672460378819 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 7085 4640 AQSGHEVTL True NCI_RA007_Epitope_Rep3 940.46140940348 940.46030993586 25.175 2 0.04570841584824109 0.005245869490611364 0.03076980526024832 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1', 'ENST00000597559.5_1_19:16547732-16582756:-|nuORF'] 87308 11726 QPQPQPYAV True PC9_epitope_Rep5 1026.5134449763398 1026.51287496793 50.103 1 0.04570621782293883 0.005245869490611364 0.030771199934822302 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 75277 7479 NIILEEGK True NCI_RA007_Epitope_Rep2 914.5072969667399 914.50618993586 33.72 2 0.04569709841939641 0.005245869490611364 0.03077698690788046 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 39204 12336 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45884993586 55.259 2 0.04569625570332377 0.005245869490611364 0.030777521725570092 ['ENSG00000132646|ENST00000379143|PCNA'] 96638 10304 SAIGLADPP True H1975_Epitope_Rep2 839.4388830537499 839.43778993586 44.64 2 0.04569043818807609 0.005245869490611364 0.030781213952605236 ['ENSG00000186838|ENST00000335426|SELENOV'] 138718 20000 YIPTELDQV True PC9_epitope_Rep1 1076.53899101784 1076.5378899358602 81.757 2 0.045686623072511486 0.005245869490611364 0.030783635520886535 ['ENSG00000149100|ENST00000531120|EIF3M'] 31322 10754 GDLGIEIPAEK True NCI_RA007_Epitope_Rep4 1140.60265390356 1140.60154993586 48.212 2 0.045671949113092726 0.005245869490611364 0.030792951093758403 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 120183 5283 VEAPPPSSP True H1975_Epitope_Rep3 879.43379767331 879.43270993586 25.403 2 0.045670468041552156 0.005245869490611364 0.03079389147135468 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 40240 21621 HQILTPFLL True PC9_epitope_Rep5 1080.6331661862 1080.63206993586 88.205 2 0.0456664153108426 0.005245869490611364 0.03079646480383228 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 124484 8332 VGVNGFGR True PC9_epitope_Rep1 804.4242360491198 804.42312993586 36.882 2 0.045643523012705016 0.005245869490611364 0.030811004129435743 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 40352 4296 HQRITEEL True NCI_RA007_Epitope_Rep3 1024.53015766964 1024.5290699358602 23.631 2 0.04562595112925414 0.005245869490611364 0.03082216847895992 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 104636 16397 SQSSVVYEI True PC9_epitope_Rep4 1010.4920408254198 1010.49094993586 71.032 2 0.0456203485610549 0.005245869490611364 0.03082572883989947 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 65006 19036 LQIDDNVTSAV True PC9_epitope_Rep5 1173.5877321154103 1173.5866299358602 78.25 2 0.04560543078988826 0.005245869490611364 0.030835210667849833 ['ENSG00000025772|ENST00000372813|TOMM34'] 96069 12896 RYLTVAAVF True NCI_RA007_Epitope_Rep3 1038.5862159937797 1038.5851099358601 57.991 2 0.045580624119048944 0.005245869490611364 0.030850983653170277 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 48678 10928 KAVKDLVVL True PC9_epitope_Rep6 983.6379172134698 983.63682993586 52.903 2 0.045579595323587664 0.005245869490611364 0.030851637952893418 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 74817 12586 NHDVQVIL True PC9_epitope_Rep2 936.50288029264 936.50178993586 53.719 2 0.04557859116115729 0.005245869490611364 0.030852276598184018 ['ENSG00000179151|ENST00000315127|EDC3'] 705 12070 AAVDATVNQVL True NCI_RA007_Epitope_Rep4 1099.58733819259 1099.58624993586 53.426 2 0.04557762565374715 0.005245869490611364 0.030852890669984936 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 126466 5123 VLLGETGK True NCI_RA007_Epitope_Rep5 815.47526856247 815.47416993586 26.402 2 0.045568758943803925 0.005245869490611364 0.030858530486431966 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 103128 6206 SPHPPSEVTA True PC9_epitope_Rep3 1020.48762415132 1020.48652993586 28.912 2 0.045567418220581614 0.005245869490611364 0.030859383354802834 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 137011 20691 YALDLSTFL True H1975_Epitope_Rep2 1041.53826274185 1041.53767496793 85.695 1 0.045560985815121184 0.005245869490611364 0.030863475462552498 ['ENSG00000137331|ENST00000259874|IER3'] 138127 19906 YGIENEVFL True PC9_epitope_Rep6 1082.52842633414 1082.52732993586 89.223 2 0.04556043958269119 0.005245869490611364 0.030863822981713675 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 105333 16731 SRPPLVVF True PC9_epitope_Rep4 913.53853752537 913.53744993586 72.323 2 0.0455423544618838 0.005267155001347412 0.03087533089135366 ['nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 9700 11940 AYGHFSYEF True NCI_RA007_Epitope_Rep4 1119.46616043075 1119.4650699358601 52.928 2 0.04553957737291335 0.005267155001347412 0.030877098342430877 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 3499 18935 [Acetylation]-AGLNSLEAVK True PC9_epitope_Rep1 1042.5658747883201 1042.56476993586 77.618 2 0.04553108643603461 0.005267155001347412 0.030882502871061708 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 33520 20000 GLDSQFVEV True PC9_epitope_Rep2 992.4814761417199 992.48036993586 82.332 2 0.04552810636268065 0.005267155001347412 0.03088439990267033 ['ENSG00000131389|ENST00000622186|SLC6A6'] 2865 12431 AEVFPPPVA True H1975_Epitope_Rep2 925.4909186266098 925.49037496793 52.902 1 0.04552116688341898 0.005267155001347412 0.030888817781063314 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 129333 11732 VQYNEPLKV True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 52.889 2 0.04549708806099721 0.005267155001347412 0.030904151407802557 ['ENSG00000148843|ENST00000369797|PDCD11'] 118137 21870 TYIPGTQITF True PC9_epitope_Rep1 1139.58627556343 1139.5857749679299 88.935 1 0.045496713283785226 0.005267155001347412 0.030904390122739447 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 20881 20571 EQLGTFTTL True PC9_epitope_Rep3 1008.51277627 1008.51166993586 84.392 2 0.04549580762944968 0.005267155001347412 0.030904966987429103 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 141838 5060 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 26.897 2 0.04549211847415295 0.005267155001347412 0.03090731692652718 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 71128 21410 LYLPSFFTY True NCI_RA007_Epitope_Rep2 1149.57464825057 1149.5740749679298 88.6 1 0.04548728350707936 0.005267155001347412 0.030910396970550844 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 131423 15180 VTIEDVQKL True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 66.314 2 0.045481217947896335 0.005267155001347412 0.030914261328830517 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 121810 16906 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 70.187 2 0.04547168788582544 0.005267155001347412 0.03092033377935163 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 42425 14943 IEDPLIVTP True H1975_Epitope_Rep3 995.55391280599 995.55280993586 62.865 2 0.04546149718909166 0.005267155001347412 0.030926828345870135 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 33167 17849 GIVGGLSTV True PC9_epitope_Rep2 801.4596184983301 801.4590749679301 73.956 1 0.04545351015265937 0.005267155001347412 0.030931919355098092 ['ENSG00000165678|ENST00000372134|GHITM'] 72890 11149 MPSSVPLRA True PC9_epitope_Rep5 956.5113368013599 956.51022993586 47.869 2 0.045453304765861686 0.005267155001347412 0.03093205028027146 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 16912 19713 EFNSTPAVF True PC9_epitope_Rep2 1010.4709114580198 1010.4703749679301 81.213 1 0.04544057225188722 0.005267155001347412 0.030940167662333005 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 91978 9550 RKQMVIDVL True NCI_RA007_Epitope_Rep1 1100.6375999436398 1100.6365099358602 41.145 2 0.045437509648925296 0.005267155001347412 0.030942120449973284 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 26279 12876 FHGAPLTV True PC9_epitope_Rep1 840.4493881678001 840.44828993586 54.401 2 0.04543707742742793 0.005267155001347412 0.030942396053334653 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 78222 21852 NYGDYFNVF True PC9_epitope_Rep4 1137.47672511445 1137.4761749679299 92.256 1 0.04542992585517958 0.005267155001347412 0.030946956524161375 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 1719 5477 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 26.086 2 0.04542768775634274 0.005267155001347412 0.030948383854712914 ['ENSG00000161847|ENST00000617231|RAVER1'] 36700 17040 GVISKTFQL True PC9_epitope_Rep2 991.57023157647 991.56912993586 70.796 2 0.04542716024524024 0.005267155001347412 0.030948720279391963 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 55072 18520 KYVENFGLI True PC9_epitope_Rep4 1081.5807962601698 1081.5796899358602 79.31 2 0.0454245076786573 0.005267155001347412 0.030950412025232795 ['ENSG00000118363|ENST00000263672|SPCS2', 'ENST00000561636.2_1_15:43423309-43423531:+|nuORF'] 26293 10133 FHGPGEAL True PC9_epitope_Rep5 826.3973525949399 826.3962499358599 43.961 2 0.04542379621445843 0.005267155001347412 0.0309508657946093 ['ENSG00000277150|ENST00000622749|F8A3'] 42840 13775 IEQFPGIEP True H1975_Epitope_Rep3 1028.5178616504397 1028.51676993586 58.288 2 0.0454224848474387 0.005267155001347412 0.030951702195318048 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1'] 121123 10261 VERPTVLP True H1975_Epitope_Rep3 909.5283667644899 909.52726993586 44.518 2 0.04541902765610953 0.005267155001347412 0.030953907316268323 ['ENST00000519589.1_1_8:133141511-133152462:-|nuORF', 'nc|ENSG00000184156|O43525-2|KCNQ3', 'KCNQ3|p.S824Rfs*4|1|0.31|ENSG00000184156|chr8:132129412-132129412|C/-|frameshift_variant', 'ENSG00000184156|ENST00000388996|KCNQ3'] 1155 7594 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 34.162 1 0.04539670302435978 0.005285696806558179 0.03096815011378889 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 96153 10186 RYPDRITLI True NCI_RA007_Epitope_Rep4 1145.65569253593 1145.65405490379 46.037 3 0.04538502861169133 0.005285696806558179 0.030975600529881925 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 129726 18950 VRPVALVL True PC9_epitope_Rep3 865.5749230340899 865.57382993586 78.116 2 0.045378773522404936 0.005285696806558179 0.030979593075812176 ['ENSG00000105464|ENST00000263269|GRIN2D', 'GRIN2D|p.R478Afs*15|1|0.33|ENSG00000105464|chr19:48414878-48414878|C/-|frameshift_variant'] 76822 11792 NRAPSLTL True PC9_epitope_Rep1 870.49231560894 870.49120993586 50.228 2 0.0453646971995855 0.005285696806558179 0.030988579481996004 ['nc|ENSG00000167695|Q8TBR7-1|TLCD3A', 'ENST00000570699.1_1_17:636236-644807:+|nuORF', 'ENSG00000167695|ENST00000308278|TLCD3A'] 14899 22831 DYATIFNNL True PC9_epitope_Rep2 1069.5080252427301 1069.5069299358602 93.309 2 0.04535665123851444 0.005285696806558179 0.030993717105208225 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 107354 20110 SVLGSLSSV True PC9_epitope_Rep3 847.4650978015901 847.46454496793 82.605 1 0.04535570906459913 0.005285696806558179 0.030994318764942918 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF', 'nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 29220 9252 FTTRSTFST True PC9_epitope_Rep5 1046.50327421546 1046.5021699358601 40.536 2 0.04534130510886201 0.005285696806558179 0.031003518225110858 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 1837 11427 AEIDASNIV True H1975_Epitope_Rep2 930.46582607758 930.4652749679301 49.006 1 0.04531741530879014 0.005285696806558179 0.031018781387389262 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 137215 11765 YAYEPADTAL True NCI_RA007_Epitope_Rep5 1112.5026055091198 1112.5015099358602 51.912 2 0.04531416783444882 0.005285696806558179 0.031020856707255847 ['ENSG00000106541|ENST00000419304|AGR2'] 91284 10704 RGMAFLHTL True NCI_RA007_Epitope_Rep4 1044.55387031968 1044.5527699358602 48.019 2 0.04530566873749795 0.005285696806558179 0.03102628869207048 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 5953 10502 APGYSYTAA True PC9_epitope_Rep5 899.4024975450299 899.40194496793 45.382 1 0.045304654404299836 0.005285696806558179 0.031026937033867552 ['ENSG00000172115|ENST00000305786|CYCS'] 128581 14638 VPTNIIAA True PC9_epitope_Rep2 797.4647038787699 797.4641549679301 61.573 1 0.04528372570209573 0.005285696806558179 0.03104031692079453 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 13079 7304 DLQDDIQNR True H1975_Epitope_Rep1 1115.52071518475 1115.5196099358602 33.106 2 0.0452829072909953 0.005285696806558179 0.031040840241161514 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 29637 17396 FVIRNIVEA True PC9_epitope_Rep2 1059.6076797143498 1059.60658993586 72.174 2 0.045280444173336654 0.005285696806558179 0.0310424152908455 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 67859 18321 LTAPALALA True PC9_epitope_Rep6 839.5116540711899 839.51054993586 83.114 2 0.045274457918984566 0.005285696806558179 0.031046243517753654 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 134683 19646 VYTEAIADI True PC9_epitope_Rep2 993.5018772331298 993.50078993586 80.953 2 0.04526438113442045 0.005285696806558179 0.031052688592893337 ['ENSG00000125755|ENST00000245934|SYMPK'] 137788 6452 YEQGPDTPVS True H1975_Epitope_Rep1 1091.4771190372699 1091.4760299358602 29.879 2 0.04526149277131979 0.005285696806558179 0.03105453619757896 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 133966 18505 VYINTAQEF True PC9_epitope_Rep1 1083.5236753068698 1083.52256993586 75.97 2 0.04525043444842449 0.005285696806558179 0.031061610793980645 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 96542 21811 SADTTILFV True PC9_epitope_Rep5 965.50696261357 965.50641496793 88.928 1 0.045230663923654955 0.005285696806558179 0.031074262598348355 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 14154 10818 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep3 1086.45394144498 1086.45337496793 46.69 1 0.045225890332469536 0.005285696806558179 0.031077318057696666 ['ENSG00000149823|ENST00000279281|VPS51'] 76835 9148 NRAQIQTVI True PC9_epitope_Rep6 1041.59309227937 1041.59198993586 45.298 2 0.04520710152808335 0.005285696806558179 0.031089346892639164 ['ENSG00000114030|ENST00000344337|KPNA1'] 99170 11658 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.4914349679301 55.971 1 0.04517575562032997 0.005285696806558179 0.031109424105304154 ['ENSG00000132646|ENST00000379143|PCNA'] 111809 23762 TILPAIILV True PC9_epitope_Rep1 951.63685458431 951.6363049679301 96.196 1 0.045174670168763975 0.005285696806558179 0.031110119547723764 ['ENSG00000198712|ENST00000361739|MT-CO2'] 76993 5255 NRGESTVL True PC9_epitope_Rep3 874.45084471978 874.44974993586 25.292 2 0.04516312259018386 0.005285696806558179 0.03111751886374876 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 70100 18794 LVPDVVNEV True PC9_epitope_Rep4 982.53351171458 982.5329649679301 80.377 1 0.04515817181535893 0.005285696806558179 0.031120691636867603 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 1373 11956 AEEDPPWAP True H1975_Epitope_Rep1 1010.4345259492999 1010.43397496793 50.993 1 0.0451493109418684 0.005285696806558179 0.031126370964916165 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 141507 20161 YTLDGGDIINA True PC9_epitope_Rep3 1150.5506183307 1150.5495299358602 82.803 2 0.04514816705378401 0.005285696806558179 0.031127104200421293 ['ENSG00000204628|ENST00000512805|RACK1'] 87210 14860 QPITPGPSI True PC9_epitope_Rep3 908.4967322830399 908.49562993586 62.295 2 0.045146278256158835 0.005285696806558179 0.031128314958460163 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 87138 20308 QPASFAVSL True PC9_epitope_Rep1 918.4810822188999 918.47998993586 82.943 2 0.04514525860369942 0.005285696806558179 0.031128968593907163 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153578959-153579424:-|nuORF'] 1158 7889 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 35.291 1 0.04513227534389894 0.005285696806558179 0.03113729241046759 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 84958 7052 QEELQQLR True PC9_epitope_Rep3 1042.5407223533398 1042.5396299358601 32.136 2 0.045122487397354 0.005285696806558179 0.031143568950595595 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 133803 17858 VYFPDQHINF True PC9_epitope_Rep6 1278.6033226099 1278.6022299358601 81.317 2 0.04511286693869749 0.005285696806558179 0.0311497391780891 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 71982 5201 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 25.077 1 0.045111546190859386 0.005285696806558179 0.031150586344116774 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 30183 17410 FYQPKIQQF True PC9_epitope_Rep1 1197.61824439805 1197.6171499358602 71.766 2 0.04511137180054443 0.005285696806558179 0.031150698204651717 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 25643 2781 FEQAGEPRQP True H1975_Epitope_Rep2 1157.5465360097699 1157.54542993586 14.726 2 0.04510776735157408 0.005285696806558179 0.031153010313841604 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 103492 7375 SPQQPGLSA True PC9_epitope_Rep2 883.4399456829099 883.43884993586 33.749 2 0.04510700232868868 0.005285696806558179 0.0311535010647896 ['ENSG00000170498|ENST00000367194|KISS1'] 6472 9536 APSGNYVAC True PC9_epitope_Rep5 880.3749028981999 880.37380993586 41.639 2 0.0450991424769373 0.005285696806558179 0.0311585434398628 ['ENSG00000114450|ENST00000232564|GNB4'] 1727 5429 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 25.941 2 0.04509000356719071 0.005285696806558179 0.031164407282835836 ['ENSG00000161847|ENST00000617231|RAVER1'] 89771 13938 RAIEGLATL True PC9_epitope_Rep4 942.5498304850599 942.54872993586 61.515 2 0.04507774095203882 0.005285696806558179 0.03117227693581373 ['ENSG00000103326|ENST00000219611|CAPN15', 'CAPN15|p.G653V|1|0.25|ENSG00000103326|chr16:549730-549730|G/T|missense_variant'] 85034 12825 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.5380449679301 54.44 1 0.045070528628708625 0.005285696806558179 0.03117690633463355 ['ENSG00000139233|ENST00000266604|LLPH'] 104032 10171 SQDNVIKVC True PC9_epitope_Rep5 1004.49608066004 1004.49498993586 44.109 2 0.04506500774003444 0.005285696806558179 0.03118045045687186 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 54508 15578 KYIEGVSDF True PC9_epitope_Rep1 1056.51277627 1056.51166993586 64.743 2 0.045063312560789485 0.005285696806558179 0.031181538744846873 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 139979 4720 YQDPHSTAV True PC9_epitope_Rep2 1016.45632402304 1016.45522993586 23.525 2 0.045061781667764964 0.005285696806558179 0.03118252159156152 ['ENSG00000146648|ENST00000275493|EGFR'] 98919 15369 SHADVVNLL True PC9_epitope_Rep4 966.51344497634 966.51234993586 67.049 2 0.045060469466482234 0.005285696806558179 0.03118336405804756 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 121976 7728 VFTSRSAAF True NCI_RA007_Epitope_Rep5 984.5028802926398 984.50178993586 36.426 2 0.04506032585795069 0.005285696806558179 0.031183456259585813 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 121868 16336 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 67.834 2 0.04505235784819248 0.005285696806558179 0.031188572368961696 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 76003 23350 NLVSFLETV True PC9_epitope_Rep2 1020.54916177872 1020.54806993586 95.29 2 0.04503687094863497 0.005304067266327728 0.03119851833747645 ['ENSG00000128791|ENST00000262120|TWSG1'] 73459 14659 MVAPAVASV True PC9_epitope_Rep4 843.4524249429099 843.45132993586 64.319 2 0.045034408907295875 0.005304067266327728 0.031200099763289676 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 48986 8841 KEFIKIVEA True NCI_RA007_Epitope_Rep2 1075.62774645259 1075.62664993586 39.038 2 0.045031927197418636 0.005304067266327728 0.031201693894320242 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 41116 10734 HTVEDLVKV True PC9_epitope_Rep6 1038.5709598524597 1038.5698699358602 52.108 2 0.04502973935401123 0.005304067266327728 0.031203099319343185 ['ENSG00000177084|ENST00000320574|POLE', 'POLE|p.Y298Sfs*2|1|0.12|ENSG00000177084|chr12:132676562-132676562|T/-|frameshift_variant'] 47690 12643 IYAGGIKSI True PC9_epitope_Rep5 920.53311779176 920.53202993586 53.635 2 0.045018498750370665 0.005304067266327728 0.03121032093068386 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4'] 129372 13898 VRDPRVLIL True PC9_epitope_Rep4 1079.68151336095 1079.68040993586 61.359 2 0.045010755902538196 0.005304067266327728 0.031215296240903613 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.E632G|1|0.23|ENSG00000204267|chr6:32829437-32829437|T/C|missense_variant'] 28789 18314 FSTTVIQNV True PC9_epitope_Rep2 1007.5287606873098 1007.52766993586 75.771 2 0.045008248910643006 0.005304067266327728 0.03121690730509424 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.D78E|1|0.25|ENSG00000100554|chr14:67350616-67350616|G/C|missense_variant'] 43225 16556 IFKPPDPDNTF True PC9_epitope_Rep4 1289.62920300457 1289.62810993586 71.656 2 0.04500558818101419 0.005304067266327728 0.031218617245860076 ['ENSG00000165943|ENST00000298894|MOAP1'] 5631 12106 ANVGWNNSTFA True NCI_RA007_Epitope_Rep4 1179.5308859456302 1179.5297899358602 53.563 2 0.04500470656142083 0.005304067266327728 0.031219183844517967 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000498385.1_1_22:24236898-24237290:+|nuORF', 'ENST00000465752.1_1_22:24237017-24237290:+|nuORF'] 48411 19185 IYVHDLLTF True PC9_epitope_Rep6 1119.59644632431 1119.5953499358602 86.447 2 0.04500270068352759 0.005304067266327728 0.031220473014550897 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 67972 13473 LTDEGLLY True H1975_Epitope_Rep3 922.46476344842 922.46421496793 57.098 1 0.045001505841191586 0.005304067266327728 0.03122124095748764 ['nc|ENSG00000136144|Q8NDN9-2|RCBTB1', 'ENSG00000136144|ENST00000378302|RCBTB1'] 63251 13309 LLSLVGSDP True H1975_Epitope_Rep3 899.49639792987 899.4958449679301 56.451 1 0.044970631581931195 0.005304067266327728 0.03124109008958512 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1'] 111376 13012 THSDAFRVSL True PC9_epitope_Rep5 1131.56727145435 1131.56563490379 55.058 3 0.04496185347792915 0.005304067266327728 0.031246735587425002 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1', 'ALPK1|p.D797Gfs*8|1|0.09|ENSG00000073331|chr4:112431936-112431937|-/GATGTGTGCCT|frameshift_variant'] 26203 18797 FHDHALMIIF True PC9_epitope_Rep6 1242.6219498795 1242.62029490379 84.943 3 0.04494728198764976 0.005304067266327728 0.03125610899875346 ['ENSG00000198712|ENST00000361739|MT-CO2'] 115319 16140 TRIDLIQKL True PC9_epitope_Rep3 1098.67609362734 1098.6749899358601 67.231 2 0.0449427203283308 0.005304067266327728 0.03125904389046568 ['ENSG00000170677|ENST00000397942|SOCS6'] 136960 11222 YAGSGNVL True PC9_epitope_Rep5 779.38136817763 779.3808149679301 48.155 1 0.04494194788174048 0.005304067266327728 0.031259540893169374 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 84983 11216 QEEVFNTAV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 48.183 2 0.044925412882942856 0.005304067266327728 0.03127018141138597 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'KIF4A|p.E1143Rfs*6|1|0.25|ENSG00000090889|chrX:70419714-70419714|G/-|frameshift_variant'] 109792 7878 TEEAPIQATP True H1975_Epitope_Rep1 1055.51350454599 1055.5124099358602 35.253 2 0.04490195007942404 0.005304067266327728 0.03128528556503507 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 47244 14196 IVCDVPSASA True PC9_epitope_Rep3 960.45863252216 960.4580849679301 59.689 1 0.04488918487184723 0.005304067266327728 0.03129350585914421 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 6567 10752 APVAEVPTA True PC9_epitope_Rep4 853.4545331178899 853.45342993586 49.115 2 0.04486290984189728 0.005304067266327728 0.03131043195392526 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 7545 13148 ASEDSVLLY True H1975_Epitope_Rep3 995.4811417885501 995.4805949679301 55.822 1 0.044853000611167586 0.005304067266327728 0.03131681747400591 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 106194 17045 STDPYLDDFYY True H1975_Epitope_Rep1 1397.5663279644898 1397.56522993586 70.989 2 0.044849292114630054 0.005304067266327728 0.03131920752928648 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 64296 12083 LPKEPQGIIA True PC9_epitope_Rep4 1064.62299542532 1064.62188993586 54.281 2 0.044827146644849276 0.005304067266327728 0.031333483215084494 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000474216.5_1_1:11137420-11140866:-|nuORF'] 4035 6925 AHFQKSYTL True PC9_epitope_Rep2 1093.5556441414901 1093.5545499358602 32.038 2 0.044817230533618954 0.005304067266327728 0.03133987732310859 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 32182 5553 GEVTNVTTA True H1975_Epitope_Rep2 890.4345259493 890.43397496793 26.367 1 0.04481176264799755 0.005304067266327728 0.03134340361853814 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 74740 8549 NHANGLTL True PC9_epitope_Rep5 838.4297153523801 838.4291649679301 37.828 1 0.04481120810595091 0.005304067266327728 0.03134376126794832 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 55302 7866 LAEAALELREE True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 35.209 2 0.044807319083510384 0.005304067266327728 0.03134626957680599 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 104857 6408 SRAPSVATV True PC9_epitope_Rep3 886.4872302285 886.48612993586 29.673 2 0.04478665366703536 0.005304067266327728 0.031359601155893244 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 111126 6361 THEQGSVMM True PC9_epitope_Rep5 1018.42120146762 1018.42010993586 29.444 2 0.04477890818015829 0.005304067266327728 0.03136459917860937 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'SAMHD1|p.E417Kfs*6|1|0.22|ENSG00000101347|chr20:36911239-36911239|C/-|frameshift_variant', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1', 'SAMHD1|p.R339Vfs*5|1|0.31|ENSG00000101347|chr20:36916769-36916769|G/-|frameshift_variant'] 62933 20481 LLPDTINSI True PC9_epitope_Rep5 984.5491617787201 984.54806993586 83.819 2 0.044770540621308766 0.005304067266327728 0.031369999403387576 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 89139 12136 QVRDVIIAA True PC9_epitope_Rep3 983.5763795860698 983.57528993586 51.721 2 0.04476145290099842 0.005304067266327728 0.03137586533323196 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 27095 17771 FLGYPITL True H1975_Epitope_Rep1 922.5164050984599 922.5158549679301 73.976 1 0.044755892248678514 0.005304067266327728 0.03137945509336615 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 16366 6491 EEILAQAK True PC9_epitope_Rep5 900.4916469026 900.49054993586 29.939 2 0.04475399421204114 0.005304067266327728 0.03138068048157714 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 109141 18281 TAMDQVFHV True PC9_epitope_Rep2 1046.4855159763401 1046.4844099358602 75.639 2 0.044735601648387836 0.005304067266327728 0.03139255706167798 ['ENSG00000145012|ENST00000617246|LPP'] 86949 15268 QLVPALAKV True PC9_epitope_Rep4 937.5960524014899 937.59494993586 66.658 2 0.04473182688114758 0.005304067266327728 0.031394995022567505 ['nc|ENSG00000158161|Q99504-2|EYA3', 'nc|ENSG00000158161|Q99504-4|EYA3', 'nc|ENSG00000158161|Q99504-5|EYA3', 'nc|ENSG00000158161|Q99504-3|EYA3', 'ENSG00000158161|ENST00000373871|EYA3'] 114629 18416 TQDTPIPAL True PC9_epitope_Rep4 954.5022115862998 954.5016649679301 78.905 1 0.044720355970872816 0.005304067266327728 0.03140240461915792 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 47306 14290 IVDSLTEMY True H1975_Epitope_Rep2 1069.5001629809701 1069.49906993586 60.116 2 0.04471057850442963 0.005304067266327728 0.031408721559969224 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 48856 8150 KEAIETIVA True H1975_Epitope_Rep1 972.5491617787198 972.54806993586 36.29 2 0.04470507741731968 0.005304067266327728 0.031412276147749135 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 8896 16084 AVFPSIVGR True PC9_epitope_Rep2 944.5443511817999 944.54324993586 67.124 2 0.044683600596208635 0.005304067266327728 0.031426157030965386 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 1206 8006 AEDAGATEVKF True H1975_Epitope_Rep3 1136.5349682665599 1136.5338699358601 35.766 2 0.04467025427750987 0.005304067266327728 0.03143478574135705 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant'] 134453 12333 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 52.751 2 0.04466034374647228 0.005304067266327728 0.03144119448676527 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 97391 9897 SEDSPPPLP True H1975_Epitope_Rep3 937.4392769765699 937.43872496793 43.1 1 0.04465454631342296 0.005304067266327728 0.03144494399025481 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12'] 52789 4945 KNLQTVNVDEN True NCI_RA007_Epitope_Rep5 1272.6309939097198 1272.62988993586 25.722 2 0.044634045900278384 0.005304067266327728 0.031458205846228174 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 27230 21884 FLPDPSALQNL True PC9_epitope_Rep2 1213.6342883850098 1213.6331899358602 89.653 2 0.044629762054020465 0.005304067266327728 0.031460977718838 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 134441 21537 VYPNWAIGL True PC9_epitope_Rep4 1031.5440168286298 1031.54347496793 91.021 1 0.04462942879647593 0.005304067266327728 0.0314611933629382 ['ENSG00000131389|ENST00000622186|SLC6A6'] 132897 9014 VVLVLAGR True NCI_RA007_Epitope_Rep5 825.5436229058099 825.54252993586 41.33 2 0.04461658237660171 0.005304067266327728 0.031469507011370794 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 48506 7821 KAINQGGLTSV True PC9_epitope_Rep4 1086.6033226099 1086.6022299358601 37.488 2 0.04461326793339477 0.005304067266327728 0.03147165229058048 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 128626 9862 VPVDTGVAA True PC9_epitope_Rep2 827.4388830537498 827.43833496793 43.267 1 0.04460916262691455 0.005327598426158997 0.03147430963637644 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 1948 4898 AEINGTM[Oxidation]NA True H1975_Epitope_Rep3 935.4018463024701 935.40074993586 23.967 2 0.0445912471601166 0.005327598426158997 0.03148590855254671 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 109888 12104 TEFIHLISS True NCI_RA007_Epitope_Rep3 1045.54441075145 1045.5433099358602 54.728 2 0.04458891720455006 0.005327598426158997 0.03148741730055547 ['ENSG00000117505|ENST00000370272|DR1'] 1400 9223 AEEELETPTP True H1975_Epitope_Rep2 1114.50299943194 1114.50190993586 40.43 2 0.044577809506915665 0.005327598426158997 0.03149461089714262 ['ENSG00000169217|ENST00000305596|CD2BP2'] 90782 14793 RESFPAPVVIL True H1975_Epitope_Rep1 1226.7023083751799 1226.70120993586 62.126 2 0.04457609128951692 0.005327598426158997 0.0314957237831651 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 76134 10588 NMVAKVDEV True PC9_epitope_Rep1 1003.5008316873099 1003.49972993586 45.619 2 0.04457009289181998 0.005327598426158997 0.03149960920558483 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 77329 13514 NSDVSLLNY True H1975_Epitope_Rep3 1023.48728979815 1023.48677496793 57.26 1 0.044553382427826395 0.005327598426158997 0.03151043552869072 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 35443 5107 GSGTAEVELK True NCI_RA007_Epitope_Rep1 989.50293986229 989.50184993586 23.95 2 0.04454269979504756 0.0053475935828877 0.03151735827976498 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 73151 10111 MRSDTPAML True PC9_epitope_Rep4 1020.47323704048 1020.47212993586 46.562 2 0.0445426245361592 0.0053475935828877 0.03151740705513851 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 24574 8001 FAHTNVESL True NCI_RA007_Epitope_Rep1 1016.4927095317599 1016.49160993586 35.116 2 0.044539421310898726 0.0053475935828877 0.03151948313092649 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 25541 20158 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54788496793 83.887 1 0.04453351862070048 0.0053475935828877 0.03152330910120416 ['ENSG00000125356|ENST00000371437|NDUFA1'] 29352 17228 FVDGSAIQV True PC9_epitope_Rep4 934.47599683846 934.47488993586 74.275 2 0.04451624794065121 0.0053475935828877 0.03153450586058893 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 77127 12772 NRNEDPLVL True PC9_epitope_Rep4 1068.55637241748 1068.55526993586 56.991 2 0.044485241897822 0.0053475935828877 0.03155461620221182 ['ENSG00000165355|ENST00000298097|FBXO33'] 27852 10242 FQDKNHLYL True PC9_epitope_Rep2 1176.5927579262 1176.59110490379 44.73 3 0.04448473017084708 0.0053475935828877 0.03155494820029116 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 71806 7494 MEGPTPVSA True H1975_Epitope_Rep3 887.4058686733099 887.40476993586 33.808 2 0.04448344992097239 0.0053475935828877 0.031555778813936515 ['ENSG00000198786|ENST00000361567|MT-ND5'] 111551 8985 TIAPALVSK True PC9_epitope_Rep2 898.5487678559 898.54766993586 39.915 2 0.04448266884266619 0.0053475935828877 0.0315562855794064 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 48025 15305 IYLPEVRKI True PC9_epitope_Rep5 1129.68593003505 1129.68427490379 63.88 3 0.04446214327663788 0.0053475935828877 0.03156960518949833 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 127166 18082 VLVDAFSHV True PC9_epitope_Rep2 985.5232813840499 985.52218993586 74.854 2 0.044461351578910256 0.0053475935828877 0.03157011904348686 ['ENSG00000101413|ENST00000373433|RPRD1B', 'RPRD1B|p.K138Qfs*22|1|0.16|ENSG00000101413|chr20:38048471-38048472|-/C|frameshift_variant'] 111439 10665 THSTLVLTA True PC9_epitope_Rep1 941.5181960036099 941.51708993586 45.913 2 0.04445243058176055 0.0053475935828877 0.031575909755809164 ['ENSG00000065526|ENST00000375759|SPEN'] 7974 10388 ATDDSLYY True H1975_Epitope_Rep2 946.39199243098 946.39088993586 44.968 2 0.04444098975828648 0.0053475935828877 0.03158333748517056 ['ENSG00000149260|ENST00000648180|CAPN5'] 8744 21834 AVDAFFTAV True PC9_epitope_Rep3 939.4701831820299 939.46908993586 89.285 2 0.044440637592870334 0.0053475935828877 0.031583566146085304 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 117052 23765 TVIDQIPFLAV True PC9_epitope_Rep1 1214.6910749851402 1214.68996993586 96.207 2 0.04443079473635062 0.0053475935828877 0.031589957701202036 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 104026 17631 SQDLVYETV True PC9_epitope_Rep5 1052.50260550912 1052.50207496793 72.829 1 0.044428435882205845 0.0053475935828877 0.031591489615694544 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 88888 21157 QVEEELFSV True PC9_epitope_Rep1 1078.51825557326 1078.51767496793 86.213 1 0.0444281069815503 0.0053475935828877 0.031591703219389394 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 11879 14006 DHIHIIAL True PC9_epitope_Rep6 930.52870111766 930.52760993586 65.729 2 0.044424372750331335 0.0053475935828877 0.03159412849572022 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 26141 19581 FGYPFRLNEA True PC9_epitope_Rep2 1212.5927579262 1212.5916699358602 80.699 2 0.04441276632272907 0.0053475935828877 0.03160166758701674 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 42972 7394 IESRTLAIA True H1975_Epitope_Rep1 972.5603951687599 972.55928993586 33.445 2 0.044411196206066386 0.0053475935828877 0.03160268759658565 ['ENSG00000147872|ENST00000276914|PLIN2'] 90057 8674 RDYYQPLAA True NCI_RA007_Epitope_Rep4 1095.5349086969097 1095.53380993586 40.153 2 0.04440823393540819 0.0053475935828877 0.03160461208325953 ['ENSG00000089639|ENST00000203556|GMIP', 'nc|ENSG00000089639|Q9P107-2|GMIP', 'GMIP|p.L373Ffs*22|1|0.24|ENSG00000089639|chr19:19637370-19637371|-/A|frameshift_variant'] 104310 12078 SQIPAQPSV True PC9_epitope_Rep3 925.48689587533 925.4863449679301 51.501 1 0.04440721701770428 0.0053475935828877 0.03160527276400288 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 75903 10571 NLQTVNVDEN True PC9_epitope_Rep2 1144.53603089572 1144.5349299358602 45.979 2 0.04437816319036283 0.0053475935828877 0.031624153877536705 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 64042 18126 LPALAGVSA True PC9_epitope_Rep5 797.46470387877 797.4641549679301 74.731 1 0.044375789592727956 0.0053475935828877 0.03162569683904015 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 69534 14161 LVDDNYFY True H1975_Epitope_Rep2 1047.45492704071 1047.4543749679299 59.623 1 0.04437353741637085 0.0053475935828877 0.03162716093181592 ['ENSG00000174231|ENST00000304992|PRPF8'] 136338 11462 WTDGSTLQY True H1975_Epitope_Rep3 1069.47163973401 1069.47107496793 49.209 1 0.04436409410905469 0.0053475935828877 0.031633300479447075 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 86746 8801 QLLGSAHEV True PC9_epitope_Rep2 952.4977949122001 952.49668993586 39.206 2 0.04435005421159926 0.0053475935828877 0.03164243043448354 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 141837 4968 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 26.538 2 0.04434602425305455 0.0053475935828877 0.03164505149119522 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 96846 6313 SASGPLHSV True PC9_epitope_Rep3 853.4293809992101 853.42828993586 29.313 2 0.04434541051357059 0.0053475935828877 0.03164545067984437 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 107172 21167 SVIIPGMTL True PC9_epitope_Rep4 929.52558988317 929.52448993586 89.582 2 0.04434325675471148 0.0053475935828877 0.03164685156357438 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 73673 21496 MYLKITQII True PC9_epitope_Rep5 1121.6518530254498 1121.6507499358602 87.719 2 0.044325626678477156 0.0053475935828877 0.03165832086815334 ['ENST00000503561.7_1_5:49963943-50055521:+|nuORF'] 104172 14656 SQFPGAITL True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49562993586 65.024 2 0.044323108074047046 0.0053475935828877 0.031659959653869016 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 29697 21976 FVLPILQKL True PC9_epitope_Rep2 1069.68995278633 1069.6888499358602 90.007 2 0.04431765094737102 0.0053475935828877 0.031663510710811846 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 119350 6563 VAPEEHPVL True NCI_RA007_Epitope_Rep3 989.5181960036099 989.51708993586 32.869 2 0.04431467793629054 0.0053475935828877 0.03166544545393374 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 104838 5647 SRAPDGAAL True PC9_epitope_Rep3 856.4402800360799 856.43918993586 26.798 2 0.044307031312992184 0.005370962622982837 0.031670422117461954 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 113759 19273 TMIKGLYGI True PC9_epitope_Rep1 994.5521389841799 994.55104993586 78.937 2 0.04430647966730642 0.005370962622982837 0.03167078117254349 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 2561 5266 AEQRLKAIVA True H1975_Epitope_Rep2 1097.6556925359298 1097.65458993586 25.323 2 0.04429546850867742 0.005370962622982837 0.03167794886530199 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4', 'ENST00000562200.5_1_16:70543798-70557434:-|nuORF'] 96982 8579 SAYQHPASF True PC9_epitope_Rep1 1006.4508447197799 1006.44974993586 37.836 2 0.044294343876487764 0.005370962622982837 0.031678681023003676 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 26447 17372 FIDDANYSV True PC9_epitope_Rep4 1042.4607406971402 1042.4596499358602 74.824 2 0.04428449913581081 0.005370962622982837 0.03168509078019629 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 116462 19805 TTLPGLLTV True PC9_epitope_Rep6 913.5484335027301 913.54732993586 88.839 2 0.04427952832923853 0.005370962622982837 0.03168832762941078 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 7508 12237 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep3 1084.4746768895598 1084.47356993586 52.244 2 0.04427232779760118 0.005370962622982837 0.03169301692994629 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 84417 9538 QADPTKLEL True NCI_RA007_Epitope_Rep5 1013.5393253710099 1013.53822993586 43.325 2 0.04426609606992075 0.005370962622982837 0.03169707579704827 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000523219.1_1_5:159833399-159834623:-|nuORF', 'ENST00000520841.1_1_5:159833399-159835410:-|nuORF'] 103974 21901 SQAPFIVAL True PC9_epitope_Rep2 944.5331177917599 944.53256496793 89.718 1 0.0442286368828763 0.005391953546246371 0.03172148348515823 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 17572 16023 EHGSDVYLL True PC9_epitope_Rep1 1031.49237517859 1031.4912699358601 66.445 2 0.04422398817914089 0.005391953546246371 0.031724513647112325 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 8312 17893 ATINEVVQV True PC9_epitope_Rep5 971.52876068731 971.52766993586 73.843 2 0.04421524182103195 0.005391953546246371 0.03173021547270278 ['ENSG00000171940|ENST00000371471|ZNF217'] 110368 7660 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 34.446 1 0.04421223322942422 0.005391953546246371 0.03173217700815006 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 1541 10616 AEEPVFAAA True H1975_Epitope_Rep2 903.4337976733099 903.43270993586 45.857 2 0.044204176430629134 0.005391953546246371 0.03173743039004137 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 1721 5680 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 26.847 2 0.04418829484496302 0.005391953546246371 0.031747788117793455 ['ENSG00000161847|ENST00000617231|RAVER1'] 47251 14199 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 59.624 2 0.044185554153217434 0.005391953546246371 0.03174957585664285 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 99124 12695 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.4914349679301 54.137 1 0.04417947324162655 0.005391953546246371 0.031753542720331644 ['ENSG00000132646|ENST00000379143|PCNA'] 106422 4535 STIKEVAQA True PC9_epitope_Rep4 945.5131106231698 945.51200993586 23.932 2 0.04416888600272415 0.005391953546246371 0.031760450315344385 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 2272 7962 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 35.574 1 0.044149385427341856 0.005391953546246371 0.031773176843077754 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 35599 15958 GTASGFYTV True PC9_epitope_Rep2 901.4181476091701 901.4175949679301 66.634 1 0.04414185313617556 0.005391953546246371 0.03177809379457641 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 21754 13074 ERTSFNYAM True PC9_epitope_Rep1 1117.4862442523297 1117.4851499358601 55.157 2 0.0440967752504423 0.005391953546246371 0.03180753389419583 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 72795 21998 MPFAGLISA True PC9_epitope_Rep5 905.46807500705 905.46696993586 89.641 2 0.04409229106440539 0.005391953546246371 0.031810463803944866 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 11750 11156 DHATTALL True PC9_epitope_Rep5 840.43413202648 840.43302993586 47.896 2 0.04408880593589975 0.005391953546246371 0.03181274110660108 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 114263 11773 TPNRATFVV True PC9_epitope_Rep5 1003.5450794577899 1003.5439899358599 50.283 2 0.04408160221717232 0.005391953546246371 0.031817448719366696 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 9704 18795 AYGHFSYEF True PC9_epitope_Rep3 1119.46616043075 1119.4650699358601 77.519 2 0.044073675633346625 0.005391953546246371 0.03182262943233341 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 26644 19749 FIPPDGNFRL True PC9_epitope_Rep5 1174.61349337078 1174.6123899358602 81.009 2 0.04407319225537198 0.005391953546246371 0.031822945385998454 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 128806 2637 VQAINVSSR True PC9_epitope_Rep2 972.53524305008 972.53414993586 14.795 2 0.0440599171496344 0.005391953546246371 0.031831623565375985 ['ENSG00000142634|ENST00000375980|EFHD2'] 74818 12675 NHDVQVIL True PC9_epitope_Rep2 936.50288029264 936.50178993586 54.063 2 0.0440590380987654 0.005391953546246371 0.031832198290638845 ['ENSG00000179151|ENST00000315127|EDC3'] 76569 22079 NQLDSLMGL True PC9_epitope_Rep3 989.48518162317 989.4846349679301 90.222 1 0.0440404341558105 0.005391953546246371 0.03184436373214725 ['ENSG00000135148|ENST00000412615|TRAFD1'] 139087 19215 YLDEIVKEV True PC9_epitope_Rep5 1106.58594121026 1106.5848499358601 78.951 2 0.04402241887898514 0.005391953546246371 0.03185614814011093 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant', 'nc|ENSG00000047410|P12270-2|TPR', 'TPR|p.E562Kfs*29|1|0.34|ENSG00000047410|chr1:186357437-186357437|C/-|frameshift_variant'] 119314 22665 VAMLPGLAL True PC9_epitope_Rep5 883.5201105799099 883.51900993586 92.182 2 0.0440217724159494 0.005391953546246371 0.031856571085097186 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 114001 11097 TPAPHSPWTA True PC9_epitope_Rep5 1063.50869394907 1063.50758993586 47.673 2 0.04400232875436981 0.005391953546246371 0.0318692943100623 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 129329 12346 VQYNEPLKV True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 52.798 2 0.044002080246143015 0.005391953546246371 0.031869456953790565 ['ENSG00000148843|ENST00000369797|PDCD11'] 70933 20534 LYGAPGVEF True PC9_epitope_Rep2 951.4701831820299 951.46963496793 84.416 1 0.04399111793024805 0.005391953546246371 0.031876632301082994 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 107064 8902 SVGKPLYL True H1975_Epitope_Rep3 875.5116540711899 875.51054993586 39.24 2 0.04398558612911355 0.005391953546246371 0.03188025366355974 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 61912 19115 LLDELPMIY True H1975_Epitope_Rep3 1105.57293399841 1105.57182993586 80.149 2 0.04397859823044224 0.005415955111002684 0.031884828770400726 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 140923 10019 YSELAEGAAY True H1975_Epitope_Rep2 1072.4713053808398 1072.47020993586 43.529 2 0.0439768184981159 0.005415955111002684 0.031885994086608485 ['ENSG00000198933|ENST00000578982|TBKBP1'] 71137 23619 LYLPSFFTY True PC9_epitope_Rep2 1149.57464825057 1149.5740749679298 96.32 1 0.04397516117567899 0.005415955111002684 0.031887079286184075 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 47213 12984 IVAPGKGILAA True PC9_epitope_Rep4 1008.6331661861998 1008.63206993586 57.836 2 0.04395589673127931 0.005435444950886002 0.03189969585653346 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 97951 10623 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.46472993586 45.885 2 0.04395577559733463 0.005435444950886002 0.03189977520286672 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 88758 19993 QTPEFFQDV True PC9_epitope_Rep4 1109.5029398622898 1109.50184993586 85.036 2 0.04395283765647786 0.005435444950886002 0.031901699694695314 ['ENSG00000169710|ENST00000306749|FASN'] 1754 10494 AEGRIIWPA True H1975_Epitope_Rep3 1011.5501648382299 1011.54906993586 45.428 2 0.04395278744851653 0.005435444950886002 0.031901732584201425 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 6564 11421 APVAEVPTA True PC9_epitope_Rep2 853.4545331178899 853.45342993586 49.252 2 0.04392733209437724 0.005435444950886002 0.0319184113584831 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 1946 4761 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 23.402 2 0.043915724608517115 0.005435444950886002 0.03192601932813692 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 53805 12095 KTDLLLEPY True H1975_Epitope_Rep3 1090.5910265906998 1090.58992993586 51.688 2 0.043902806932072255 0.005435444950886002 0.0319344879231641 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 44289 19115 ILDDSHLLV True PC9_epitope_Rep2 1023.56006081559 1023.5589699358601 78.896 2 0.04386416077908707 0.005435444950886002 0.031959835462347166 ['ENSG00000021776|ENST00000156471|AQR'] 104037 4559 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44521496793 22.413 1 0.043851994857920726 0.005435444950886002 0.031967818609138866 ['ENSG00000130935|ENST00000253247|NOL11'] 93099 8756 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 38.634 2 0.04384992736163079 0.005435444950886002 0.031969175452642364 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 132903 11387 VVLVLAGR True PC9_epitope_Rep6 825.5436229058099 825.54252993586 54.851 2 0.04383758964666169 0.005435444950886002 0.03197727342577055 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 115179 5893 TRDPQFQKL True PC9_epitope_Rep4 1131.6036569630699 1131.6020249037902 29.566 3 0.0438230718772915 0.005435444950886002 0.03198680461216481 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 40218 6041 HQGVMVGMGQK True PC9_epitope_Rep1 1170.5637833803796 1170.5626899358601 28.05 2 0.043811126618158565 0.005435444950886002 0.03199464877442071 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 54464 11402 KYGNLSNYL True NCI_RA007_Epitope_Rep2 1070.53965972418 1070.53856993586 48.941 2 0.04381011219341989 0.005435444950886002 0.0319953150006332 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 8101 8711 ATDYPLIAR True NCI_RA007_Epitope_Rep4 1018.5447451046199 1018.54364993586 40.298 2 0.043804344972930544 0.005435444950886002 0.03199910287067346 ['ENSG00000101265|ENST00000379400|RASSF2', 'RASSF2|p.L235R|1|0.51|ENSG00000101265|chr20:4787742-4787742|A/C|missense_variant'] 98885 12113 SGVSLAALK True PC9_epitope_Rep3 844.50181766348 844.50072993586 51.636 2 0.04380173751877277 0.005435444950886002 0.032000815557991086 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 32246 14391 GEYSFKIFP True NCI_RA007_Epitope_Rep4 1086.53859709502 1086.53750993586 62.664 2 0.04380158692502913 0.005435444950886002 0.03200091447686409 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 119328 13124 VANRYFTTV True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 55.486 2 0.043796354263462324 0.005435444950886002 0.03200435176560391 ['GAPVD1|p.R1391Gfs*8|1|0.07|ENSG00000165219|chr9:125360595-125360595|C/-|frameshift_variant', 'nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1', 'ENST00000467707.1_1_9:128116999-128121864:+|nuORF', 'ENST00000474637.5_1_9:128108952-128125022:+|nuORF'] 99134 13042 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.4914349679301 55.445 1 0.043795311632123086 0.005435444950886002 0.03200503669969685 ['ENSG00000132646|ENST00000379143|PCNA'] 127734 13166 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.45852993586 55.647 2 0.043777470710335914 0.005435444950886002 0.032016758908325005 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 74497 7511 NFGFGDSR True NCI_RA007_Epitope_Rep3 898.3933298436599 898.39222993586 36.67 2 0.043773091941445796 0.005435444950886002 0.0320196365149297 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 48274 12145 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 51.577 3 0.043752892969409096 0.005435444950886002 0.032032913674120096 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 25508 14928 FEGIVTDLIR True NCI_RA007_Epitope_Rep2 1161.63937376545 1161.63826993586 62.745 2 0.04374709467701962 0.005435444950886002 0.03203672589509606 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 88524 17810 QTAEEFYTV True PC9_epitope_Rep2 1086.48695544498 1086.4858499358602 73.799 2 0.043746915388132857 0.005435444950886002 0.03203684377907656 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 134586 20903 VYSGGVYLF True PC9_epitope_Rep4 1003.5014833103099 1003.50097496793 88.563 1 0.043740982782592384 0.005435444950886002 0.032040744733602904 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 125919 19402 VLDAEKAFVSV True PC9_epitope_Rep3 1176.63903941228 1176.6379499358602 79.853 2 0.04373140239931029 0.005435444950886002 0.032047045149181816 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 24826 20215 FAVFQTTFF True H1975_Epitope_Rep1 1106.54368247546 1106.5425899358602 84.104 2 0.04372890391564573 0.005435444950886002 0.032048688424156424 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 133553 20641 VWSDVTPLTF True PC9_epitope_Rep6 1163.58627556343 1163.5851699358602 92.13 2 0.04371389048047205 0.005435444950886002 0.03205856445735215 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 29940 19829 FVYPLDFART True PC9_epitope_Rep4 1227.6288090817498 1227.6277099358601 84.4 2 0.04369998240852088 0.005435444950886002 0.03206771575996141 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 12612 15252 DLAGSIIGK True PC9_epitope_Rep1 872.4967322830399 872.49562993586 63.487 2 0.0436839005951912 0.005435444950886002 0.03207830022006246 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 118058 20968 TYFSTPLLL True PC9_epitope_Rep6 1053.57464825057 1053.57354993586 93.447 2 0.04368259523838581 0.005435444950886002 0.032079159493067076 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 73891 20768 NAVVELVTV True PC9_epitope_Rep1 942.5385970950199 942.5380449679301 84.712 1 0.04367356576351455 0.005435444950886002 0.03208510385142724 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 139841 7308 YPNSGSVSA True PC9_epitope_Rep3 880.39266113732 880.39156993586 33.115 2 0.04366816313370167 0.005435444950886002 0.03208866101910292 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 71210 14957 LYPEGLAQL True NCI_RA007_Epitope_Rep4 1002.5385970950199 1002.53750993586 64.996 2 0.04366808858201574 0.005435444950886002 0.03208871010741393 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 47870 15287 IYIAGHPAF True PC9_epitope_Rep2 987.51780208079 987.51670993586 64.079 2 0.04366807002312478 0.005435444950886002 0.03208872232746459 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 399 5178 AALEDKNSL True NCI_RA007_Epitope_Rep3 959.49237517859 959.49126993586 27.359 2 0.04366387991050774 0.005435444950886002 0.03209148140050224 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1'] 125338 20017 VIPTNVPEL True PC9_epitope_Rep3 980.5542471591599 980.55314993586 82.243 2 0.04366014559028096 0.005435444950886002 0.03209394052295732 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 29667 22054 FVLDKVPFL True PC9_epitope_Rep5 1076.6270181766 1076.62592993586 89.858 2 0.043648566380966106 0.005457025920873124 0.03210156671250148 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 95058 8975 RTSTGIIGV True PC9_epitope_Rep6 902.5185303567799 902.51742993586 44.538 2 0.04363791376352601 0.005457025920873124 0.032108584048261925 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 71715 9571 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42662993586 41.738 2 0.043624376730705496 0.005457025920873124 0.03211750342115652 ['ENSG00000026025|ENST00000544301|VIM'] 17701 6406 EHNDLQYAA True PC9_epitope_Rep4 1059.46213767947 1059.46104993586 31.731 2 0.043615134589518746 0.005457025920873124 0.032123594199725276 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 134638 15441 VYSQFITQL True NCI_RA007_Epitope_Rep4 1097.5757108797297 1097.57460993586 67.062 2 0.0436129866348491 0.005457025920873124 0.03212500989574387 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 139430 21208 YLPPGFLSA True PC9_epitope_Rep1 963.50656869075 963.50546993586 86.408 2 0.04360791620060162 0.005457025920873124 0.03212835198753466 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 99982 9392 SIPGGPVRL True H1975_Epitope_Rep2 894.52870111766 894.52760993586 41.091 2 0.043601213661082716 0.005457025920873124 0.032132770324037864 ['CON__P12763'] 43821 17607 IHSEPLGVVL True PC9_epitope_Rep2 1062.60734536118 1062.6062499358602 73.003 2 0.043582803135199216 0.005457025920873124 0.0321449093577885 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 47760 20507 IYEPNFIFF True NCI_RA007_Epitope_Rep3 1188.5855472874398 1188.5844499358602 89.341 2 0.043576285908516345 0.005457025920873124 0.03214920747778243 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 111911 13062 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 61.849 2 0.04357357116579774 0.005457025920873124 0.03215099800364737 ['ENSG00000213719|ENST00000375784|CLIC1'] 35537 4613 GSSSVILEK True NCI_RA007_Epitope_Rep3 918.5022115863 918.50110993586 25.06 2 0.04355144561565669 0.005457025920873124 0.03216559432568438 ['ENSG00000177409|ENST00000318238|SAMD9L'] 80178 15413 PFVDHVFTF True NCI_RA007_Epitope_Rep4 1107.53893144819 1107.5378299358601 66.957 2 0.043532197780326375 0.005457025920873124 0.032178296952062896 ['ENSG00000113460|ENST00000336767|BRIX1'] 3921 7970 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 40.116 2 0.04351952317091808 0.005457025920873124 0.03218666398361748 ['ENSG00000075618|ENST00000382361|FSCN1'] 114519 11833 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.4752299358599 50.846 2 0.04349649021187083 0.005457025920873124 0.03220187389157371 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 28080 12020 FQTHTTPVL True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 51.097 2 0.043493824973828636 0.005457025920873124 0.03220363430073312 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 20959 12271 EQPYKWEKF True PC9_epitope_Rep2 1253.6080736371698 1253.60641490379 52.51 3 0.043492685760823595 0.005457025920873124 0.03220438678507554 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 48049 8583 IYLSKPTHW True NCI_RA007_Epitope_Rep4 1143.60767971435 1143.60604490379 39.798 3 0.04347537698092333 0.005457025920873124 0.032215821657511905 ['ENSG00000047315|ENST00000314595|POLR2B'] 106781 10353 SVADTVARV True PC9_epitope_Rep5 916.4977949121999 916.49668993586 44.807 2 0.0434708723346817 0.005457025920873124 0.03221879819312965 ['ENSG00000145632|ENST00000274289|PLK2'] 21334 12607 ERFEKTFQL True PC9_epitope_Rep4 1196.6189726740397 1196.61733490379 56.332 3 0.04346843159696311 0.005457025920873124 0.032220411060797934 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 40581 6198 HRGTGLVL True PC9_epitope_Rep4 851.49773534255 851.49662993586 30.878 2 0.043457210277609536 0.005457025920873124 0.03222782715280306 ['ENSG00000099812|ENST00000215582|MISP'] 1156 7696 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 34.557 1 0.04341955246099963 0.005457025920873124 0.032252725925907035 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 23078 17907 EVIKELAQI True PC9_epitope_Rep1 1041.6070110080097 1041.6059099358602 73.671 2 0.04341691472899395 0.005471789883268482 0.032254470588409405 ['ENSG00000115241|ENST00000344034|PPM1G', 'PPM1G|p.T107S|1|0.14|ENSG00000115241|chr2:27385837-27385837|T/A|missense_variant', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 504 5890 AAPAEEPAAAA True PC9_epitope_Rep2 967.4610750503098 967.45996993586 28.048 2 0.043407816492627246 0.005471789883268482 0.03226048902894813 ['ENSG00000277443|ENST00000612661|MARCKS'] 87711 9876 QRAHQILVL True PC9_epitope_Rep4 1076.6454622054 1076.6443699358601 45.639 2 0.04339780996917842 0.005471789883268482 0.03226710943850365 ['ENSG00000204267|ENST00000374897|TAP2'] 97526 9074 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 39.855 2 0.043392243509457924 0.005471789883268482 0.03227079277796069 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'SMTN|p.V446L|1|0.43|ENSG00000183963|chr22:31091359-31091359|G/T|missense_variant'] 85708 9293 QHADPPVQI True PC9_epitope_Rep2 1003.50869394907 1003.50758993586 41.086 2 0.043381344784835324 0.005471789883268482 0.03227800556125444 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 75090 12929 NHVRTWSVT True PC9_epitope_Rep3 1098.55704112382 1098.55594993586 54.756 2 0.04338056252827478 0.005471789883268482 0.03227852331374478 ['ENSG00000160410|ENST00000291842|SHKBP1'] 58090 10434 LEIVNPQAA True H1975_Epitope_Rep2 953.51819600361 953.51708993586 45.149 2 0.04337860102640645 0.005471789883268482 0.03227982160598455 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 73014 20099 MRASSFLIV True PC9_epitope_Rep1 1022.5582869937799 1022.5577749679301 82.139 1 0.04337072834678267 0.005471789883268482 0.03228503289132048 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 100189 23782 SIVDFLITA True PC9_epitope_Rep1 977.5433481222899 977.54279496793 96.273 1 0.043369670333457004 0.005471789883268482 0.032285733294985346 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 40196 18643 HQFPELMGV True PC9_epitope_Rep4 1056.5062514209199 1056.5051499358601 79.788 2 0.04335428159540655 0.005471789883268482 0.032295922134702705 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000464020.1_1_7:116859112-116863031:+|nuORF'] 44951 11245 IPAAIATA True PC9_epitope_Rep4 726.4275900940601 726.4270449679301 51.028 1 0.043353131873115645 0.005471789883268482 0.032296683476162845 ['ENSG00000144224|ENST00000272638|UBXN4'] 34759 20557 GQFGVGFYSA True PC9_epitope_Rep5 1031.4712458111896 1031.47014993586 84.117 2 0.043343852451526076 0.005471789883268482 0.032302828849923394 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 45384 8140 IQEAVYKNV True PC9_epitope_Rep4 1062.57095985246 1062.5698699358602 38.765 2 0.043342185440910216 0.005471789883268482 0.03230393295053972 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 105270 21642 SRLGLPLLL True PC9_epitope_Rep3 980.63825156664 980.63714993586 88.545 2 0.043341676108680026 0.005471789883268482 0.03230427029996388 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 43050 8596 IEVDSSPSV True H1975_Epitope_Rep2 931.44984166027 931.4492949679301 38.018 1 0.04332381978223602 0.005471789883268482 0.03231609915998706 ['RAP2C|p.E43D|1|0.05|ENSG00000123728|chrX:132217140-132217140|C/A|missense_variant', 'ENSG00000181467|ENST00000323534|RAP2B', 'ENSG00000125249|ENST00000245304|RAP2A', 'ENSG00000123728|ENST00000370874|RAP2C'] 128316 10167 VPPPPPPPP True PC9_epitope_Rep2 893.50108938749 893.49998993586 44.444 2 0.04331884548622018 0.005471789883268482 0.03231939504347514 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1019Efs*12|1|0.21|ENSG00000139734|chr13:59810896-59810896|T/-|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000188316|ENST00000341276|ENO4'] 117377 15260 TVPKPDVVVQV True PC9_epitope_Rep1 1179.68632395787 1179.6852299358602 63.518 2 0.043317710513386135 0.005471789883268482 0.032320147098515474 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 71416 23571 LYTDIINIF True PC9_epitope_Rep2 1110.5961119711399 1110.5950099358602 96.141 2 0.043306350283569384 0.005471789883268482 0.03232767545595371 ['ENST00000533377.1_1_8:145066406-145067006:+|nuORF', 'ENSG00000178719|ENST00000395068|GRINA'] 97465 11676 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 49.984 1 0.043304263961287164 0.005471789883268482 0.032329058217164745 ['ENSG00000135900|ENST00000258383|MRPL44'] 55066 16324 KYTKIFNDF True PC9_epitope_Rep3 1174.60225998074 1174.60116993586 67.926 2 0.04329897919403867 0.005471789883268482 0.032332561059044994 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 35186 10628 GRADGYVL True PC9_epitope_Rep1 849.43446637965 849.43336993586 45.773 2 0.043295265631849156 0.005471789883268482 0.03233502267682786 ['ENSG00000142937|ENST00000396651|RPS8'] 40140 12605 HQADIGEYV True PC9_epitope_Rep5 1030.47197408718 1030.47086993586 53.485 2 0.04329211091936267 0.005471789883268482 0.03233711397813984 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 14366 6050 DSYVGDEAQTK True NCI_RA007_Epitope_Rep2 1211.5306111621096 1211.52950993586 28.138 2 0.04326849489565611 0.005471789883268482 0.03235277313849208 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 441 19924 AALPNVYEV True PC9_epitope_Rep5 974.5072969667399 974.5067449679301 81.692 1 0.043264683336740446 0.005471789883268482 0.032355301107608134 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 9854 8412 AYLHTTTTF True NCI_RA007_Epitope_Rep3 1053.51311062317 1053.51200993586 40.179 2 0.04326040618985712 0.005471789883268482 0.03235813807911382 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 42964 10983 IESPPAFTA True H1975_Epitope_Rep3 931.46509780159 931.46400993586 47.335 2 0.04325948751119871 0.005471789883268482 0.03235874745433031 ['ENSG00000152382|ENST00000367874|TADA1'] 38996 9256 HHMGGMAGL True PC9_epitope_Rep3 909.3949271501299 909.39382993586 40.548 2 0.043258561002376794 0.005471789883268482 0.03235936203365491 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 44800 17354 IMPYELTRV True PC9_epitope_Rep4 1120.59506642532 1120.59396993586 74.757 2 0.04325243401306242 0.005471789883268482 0.032363426496300036 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 55045 14576 KYSNMEQSLF True PC9_epitope_Rep6 1245.5699738762899 1245.5688699358602 67.963 2 0.04325116000945459 0.005471789883268482 0.032364271688846154 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 1291 7968 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 35.597 2 0.04324168106181923 0.005471789883268482 0.032370560770587135 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 26905 14941 FLDGNEMTL True NCI_RA007_Epitope_Rep4 1038.46919720586 1038.46808993586 64.936 2 0.04321570253957381 0.005471789883268482 0.0323878024840984 ['ENSG00000169504|ENST00000374379|CLIC4'] 78542 11814 NYPSAFHSV True PC9_epitope_Rep5 1020.46649478392 1020.46538993586 50.438 2 0.043211100985034195 0.005471789883268482 0.03239085733701645 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 23916 12060 EYLDDRNTF True PC9_epitope_Rep6 1171.51456717515 1171.51346993586 57.701 2 0.043210514426028294 0.005471789883268482 0.032391246756569875 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.H214R|1|0.61|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant'] 134723 12675 VYTSGIYNI True NCI_RA007_Epitope_Rep3 1028.51786165044 1028.51727496793 57.101 1 0.04319207807741448 0.005471789883268482 0.032403488843228065 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 34057 23482 GLVPFLVSV True PC9_epitope_Rep3 929.5586042636099 929.55805496793 95.602 1 0.04318700411475051 0.005471789883268482 0.03240685876531288 ['ENSG00000182481|ENST00000330459|KPNA2'] 89133 12095 QVRDVIIAA True PC9_epitope_Rep1 983.5763795860698 983.57528993586 51.383 2 0.04318606952879095 0.005471789883268482 0.032407479513372625 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 89480 19153 QYGGDLTNTF True PC9_epitope_Rep1 1114.49310345458 1114.4925749679298 78.466 1 0.04318492230412259 0.005471789883268482 0.03240824150946902 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 103033 10944 SPFRVNVGA True PC9_epitope_Rep4 945.5032146458099 945.50210993586 49.865 2 0.04318129761853777 0.005471789883268482 0.0324106491591377 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 2229 5803 AEMTTRMVA True NCI_RA007_Epitope_Rep3 1008.47323704048 1008.47212993586 29.803 2 0.04315820946072549 0.005471789883268482 0.03242598885766314 ['ENSG00000205220|ENST00000358514|PSMB10'] 97653 7838 SEGGSSFVTA True H1975_Epitope_Rep2 940.4137905047199 940.41324496793 35.099 1 0.04315691242864864 0.005471789883268482 0.032426850791091096 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16', 'ENST00000510995.1_1_5:79729945-79735859:+|nuORF'] 104174 15015 SQFPGAITL True NCI_RA007_Epitope_Rep4 932.4967322830399 932.49562993586 65.265 2 0.043153597583086116 0.005471789883268482 0.03242905373967894 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 47768 23815 IYEPNFIFF True PC9_epitope_Rep2 1188.5855472874398 1188.5849749679298 97.074 1 0.04314851093814577 0.005471789883268482 0.032432434429895 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 115076 15154 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61225490379 63.547 3 0.04313913416884602 0.005471789883268482 0.03243866723868404 ['ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENSG00000115539|ENST00000264254|PDCL3'] 98953 7547 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.47048993586 33.98 2 0.04313595642971224 0.005471789883268482 0.032440779744727526 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 29331 14258 FVDEPLIHATT True PC9_epitope_Rep6 1241.6292030045697 1241.62810993586 66.734 2 0.043127912666384216 0.005471789883268482 0.032446127640417405 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 24828 20101 FAVFQTTFF True H1975_Epitope_Rep3 1106.54368247546 1106.5425899358602 84.11 2 0.04312518923041799 0.005471789883268482 0.03244793849242458 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 47277 19939 IVDGMGITGV True PC9_epitope_Rep5 960.4950180308799 960.49392993586 81.75 2 0.0431233418960694 0.005471789883268482 0.03244916686238394 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525178.5_1_11:108217294-108236232:+|nuORF'] 138357 16451 YHFPDQQEL True PC9_epitope_Rep3 1175.52473793603 1175.52364993586 68.417 2 0.04312237005733712 0.005471789883268482 0.03244981309506938 ['ENSG00000165490|ENST00000533655|DDIAS', 'DDIAS|p.P901T|1|0.37|ENSG00000165490|chr11:82934039-82934039|C/A|missense_variant'] 114087 2550 TPFQGQGHGA True PC9_epitope_Rep4 998.4569927293797 998.45588993586 14.721 2 0.04310995855867212 0.005471789883268482 0.03245806722548904 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 62712 16547 LLLNNDNLLR True PC9_epitope_Rep6 1196.6877209401998 1196.68662993586 76.087 2 0.043106922845963166 0.005471789883268482 0.0324600863738507 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 21795 9329 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58569490379 40.74 3 0.043089955649004585 0.005471789883268482 0.03247137382681303 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 57554 6577 LEDRPSNLP True H1975_Epitope_Rep1 1039.52982331647 1039.5287299358602 30.357 2 0.04305837582554618 0.005471789883268482 0.03249239154405469 ['ENSG00000108239|ENST00000225235|TBC1D12'] 98940 19316 SHALVTLTL True PC9_epitope_Rep3 953.5545815123301 953.55348993586 79.521 2 0.04305414709246461 0.005471789883268482 0.03249520685417471 ['nc|ENSG00000167702|Q96AC6|KIFC2', 'KIFC2|p.S598C|1|0.19|ENSG00000167702|chr8:144472638-144472638|C/G|missense_variant', 'ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2'] 72791 22056 MPFAGLISA True PC9_epitope_Rep1 905.46807500705 905.46696993586 89.65 2 0.043051091826151903 0.005471789883268482 0.03249724105366839 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 39227 18578 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58057496793 76.247 1 0.043042129300668704 0.005471789883268482 0.03250320895863067 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 111460 11041 THTTPVLL True PC9_epitope_Rep2 880.5018176634799 880.50072993586 47.788 2 0.04304183372284952 0.005471789883268482 0.03250340579237777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 141267 6226 YTDKIM[Oxidation]TY True H1975_Epitope_Rep2 1049.47394861357 1049.47284993586 28.911 2 0.04303519074410426 0.005471789883268482 0.03250782981899649 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 104371 20292 SQITSLVTL True PC9_epitope_Rep4 960.54916177872 960.54861496793 86.196 1 0.04303411235467167 0.005471789883268482 0.03250854804430214 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 107805 11990 SVTQIYHAV True PC9_epitope_Rep1 1016.5290950404799 1016.52798993586 50.982 2 0.04303181055359791 0.005471789883268482 0.03251008112880303 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 72336 23527 MIPLLLAAL True PC9_epitope_Rep4 953.5983609006099 953.59726993586 98.801 2 0.0430271899023346 0.005471789883268482 0.03251315884507961 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 101273 23770 SLIDIVTEI True PC9_epitope_Rep5 1001.56447748969 1001.56338993586 96.413 2 0.04301790092678014 0.005471789883268482 0.03251934680697076 ['ENSG00000068745|ENST00000328631|IP6K2'] 115501 9140 TRQTGIVL True PC9_epitope_Rep2 886.5236157372198 886.52250993586 40.498 2 0.04301551036589824 0.005471789883268482 0.03252093947518643 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 109271 9054 TATSEYQTF True NCI_RA007_Epitope_Rep3 1046.4556553167 1046.45454993586 42.705 2 0.043012547014764715 0.005471789883268482 0.032522913849832476 ['F2|p.A393Pfs*73|1|0.22|ENSG00000180210|chr11:46728039-46728039|G/-|frameshift_variant', 'ENSG00000180210|ENST00000311907|F2'] 63047 19444 LLQDFFNGR True PC9_epitope_Rep2 1108.56654317836 1108.5654499358602 80.17 2 0.04300571842423815 0.005471789883268482 0.032527463896277836 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 875 7310 ADIC[Carbamidomethyl]TLPDTEK True H1975_Epitope_Rep1 1261.58601814268 1261.5849299358601 33.125 2 0.043000557739550076 0.005471789883268482 0.032530902950210876 ['CON__P02769'] 42336 9538 IEAKSNDVLP True H1975_Epitope_Rep2 1084.57643915572 1084.57534993586 41.66 2 0.04299753770824061 0.005471789883268482 0.03253291563196753 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B'] 34668 20189 GQDGLYIGV True PC9_epitope_Rep1 920.4603467743199 920.4597949679301 82.486 1 0.042988072814756376 0.005471789883268482 0.03253922416288444 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 43608 5085 IGTVPVGR True H1975_Epitope_Rep3 797.47593726881 797.47484993586 24.675 2 0.042984229524921404 0.005471789883268482 0.03254178609548853 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 31685 19164 GEFTFLLPA True H1975_Epitope_Rep1 993.5171333744498 993.51658496793 79.867 1 0.04298082728521888 0.005471789883268482 0.03254405417259049 ['ENSG00000099203|ENST00000214869|TMED1'] 72965 23032 MQFGELLAAV True PC9_epitope_Rep2 1077.55286726017 1077.5517699358602 94.085 2 0.04297791698693191 0.005471789883268482 0.03254599441101808 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16', 'nc|ENSG00000291110|Q309B1-2|TRIM16L'] 97761 8193 SEITDTVAA True H1975_Epitope_Rep2 905.43419159613 905.43364496793 36.467 1 0.04297582893413776 0.005471789883268482 0.03254738653727477 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 104369 21249 SQITSLVTL True PC9_epitope_Rep1 960.54916177872 960.54861496793 86.557 1 0.04297338533457894 0.005471789883268482 0.03254901577670958 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 77319 12063 NSDPYSVAL True NCI_RA007_Epitope_Rep4 964.4501760134399 964.44962496793 53.4 1 0.04294285238254445 0.005492369009429377 0.03256937928765289 ['CYBB|p.Y425*|1|0.29|ENSG00000165168|chrX:37805129-37805129|C/-|frameshift_variant', 'ENSG00000165168|ENST00000378588|CYBB'] 8213 10216 ATFTGILGK True NCI_RA007_Epitope_Rep4 906.5174677276199 906.51636993586 46.152 2 0.04292161159123923 0.005492369009429377 0.03258355213269838 ['nc|ENSG00000167995|O76090-3|BEST1', 'ENST00000534553.5_1_11:61722629-61730618:+|nuORF'] 49128 5245 KEKLIAPVA True H1975_Epitope_Rep2 967.6066170851898 967.60552993586 25.241 2 0.042908658950481175 0.005492369009429377 0.03259219739914505 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 24714 6793 FANGRSTGL True PC9_epitope_Rep1 921.46682913709 921.4657299358599 30.935 2 0.04290803154653083 0.005492369009429377 0.03259261621239535 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 72831 9262 MPNGDHIVSA True PC9_epitope_Rep1 1039.47567956863 1039.4745899358602 40.479 2 0.042904419578752136 0.005492369009429377 0.03259502741447297 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 137241 10443 YCAEIAHNV True PC9_epitope_Rep3 1018.4542158480599 1018.45310993586 45.106 2 0.04289984236986697 0.005492369009429377 0.032598083197368656 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000458542.1_1_3:25791186-25791384:+|nuORF'] 68141 13803 LTDQAIFY True H1975_Epitope_Rep2 969.4807478657299 969.4801949679301 58.24 1 0.04289972982185504 0.005492369009429377 0.03259815833853447 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 1426 14539 AEEFPNLAV True H1975_Epitope_Rep1 988.4865615221598 988.48546993586 61.129 2 0.04288907260585531 0.005492369009429377 0.032605274175357885 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 111431 10139 THSPYVAQI True PC9_epitope_Rep2 1014.51344497634 1014.51234993586 44.338 2 0.04286862081514713 0.005492369009429377 0.03261893368744956 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 87575 17664 QQLGTAVEL True PC9_epitope_Rep1 957.5131106231698 957.51200993586 72.739 2 0.042856572800370744 0.005492369009429377 0.03262698277033124 ['ENSG00000138594|ENST00000308580|TMOD3'] 31093 22352 GAVDPLLAL True PC9_epitope_Rep5 867.50656869075 867.5060249679301 90.986 1 0.042844204787643 0.005492369009429377 0.032635247454891235 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 72031 8567 METGTGLTP True H1975_Epitope_Rep2 905.4164333570099 905.4158849679301 37.906 1 0.042838109250044686 0.005492369009429377 0.03263932135663099 ['ENSG00000068489|ENST00000262293|PRR11'] 34783 20083 GQGEVLVYV True PC9_epitope_Rep3 962.5072969667398 962.5067449679301 82.501 1 0.04283797243973646 0.005492369009429377 0.032639412797789376 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 107480 5960 SVMRPEQIMK True NCI_RA007_Epitope_Rep3 1217.6260492837698 1217.62441490379 30.424 3 0.04283567364021452 0.005492369009429377 0.03264094930115829 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 6788 21508 AQEDYLFSV True PC9_epitope_Rep3 1070.49204082542 1070.49094993586 88.025 2 0.04281895087536146 0.005492369009429377 0.032652128607483566 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 13848 12210 DQNLTPKL True PC9_epitope_Rep5 927.50254593947 927.50144993586 51.951 2 0.04280736197574072 0.005492369009429377 0.03265987785683577 ['ENSG00000134070|ENST00000256458|IRAK2'] 120920 10952 VENSYSISV True H1975_Epitope_Rep2 996.47639076128 996.47584496793 47.158 1 0.04280543328083488 0.005492369009429377 0.032661167690776864 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 90334 4612 REFEERHIP True H1975_Epitope_Rep3 1211.6047195922297 1211.60308490379 22.862 3 0.04280300460974009 0.005492369009429377 0.032662791952470016 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 1320 7243 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 32.794 2 0.04279125058576681 0.005492369009429377 0.03267065388480026 ['ENSG00000012174|ENST00000379484|MBTPS2'] 39205 12430 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45884993586 55.615 2 0.04278966007339079 0.005492369009429377 0.03267171786105253 ['ENSG00000132646|ENST00000379143|PCNA'] 8397 6336 ATLQNVLRK True NCI_RA007_Epitope_Rep2 1041.6294777880898 1041.62838993586 29.252 2 0.04278625590554278 0.005492369009429377 0.03267399518790655 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant', 'KPNB1|p.V595L|1|0.28|ENSG00000108424|chr17:47674653-47674653|G/C|missense_variant'] 90703 5145 REQPPRFAQP True H1975_Epitope_Rep3 1224.6363540736797 1224.63469490379 24.894 3 0.042781434040311234 0.005492369009429377 0.0326772211675134 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 29891 20293 FVVEHDFIMA True PC9_epitope_Rep1 1206.5743309807401 1206.5732299358601 82.884 2 0.04278103551712089 0.005492369009429377 0.03267748780459627 ['ENSG00000164163|ENST00000296577|ABCE1', 'ENST00000510321.1_1_4:146044588-146044753:+|nuORF', 'ENST00000515678.5_1_4:146042303-146044753:+|nuORF', 'ENST00000444025.1_1_7:23602199-23602811:-|nuORF'] 4294 20789 AIIDGKIFCV True PC9_epitope_Rep5 1077.58925276889 1077.5881499358602 85.016 2 0.04277758053651957 0.005492369009429377 0.03267979948410651 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 32024 7062 GEQSVVTAP True H1975_Epitope_Rep2 886.4396113297399 886.4390649679301 32.092 1 0.042774917409621624 0.005492369009429377 0.0326815814434061 ['ENSG00000100324|ENST00000216160|TAB1'] 43179 23451 IFGVIIDTF True PC9_epitope_Rep2 1023.56408356687 1023.56298993586 95.675 2 0.04277305917705126 0.005492369009429377 0.032682824880033864 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 666 10282 AATKILTEL True H1975_Epitope_Rep3 958.5698972233 958.56880993586 44.601 2 0.04277011110476464 0.005492369009429377 0.032684797668402245 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'MAP7D3|p.H864Qfs*2|1|0.07|ENSG00000129680|chrX:136219469-136219470|-/T|frameshift_variant', 'ENSG00000129680|ENST00000316077|MAP7D3'] 106683 16438 STTNGGILTV True PC9_epitope_Rep5 961.50802524273 961.50692993586 68.227 2 0.04276872588912496 0.005492369009429377 0.0326857246619051 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 138424 15246 YHILGNEM True PC9_epitope_Rep3 975.44840219163 975.44730993586 63.791 2 0.0427552109771244 0.00551559918359413 0.03269477012387684 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 114323 22796 TPQSIFIFA True PC9_epitope_Rep5 1022.5436824754598 1022.5431749679301 92.676 1 0.04274810083108919 0.00551559918359413 0.03269952979168703 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 20682 18714 EQDPTNLYI True PC9_epitope_Rep4 1091.51350454599 1091.5124099358602 80.063 2 0.04274091959827839 0.00551559918359413 0.03270433766450338 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000497205.1_1_3:29476395-29781369:+|nuORF', 'nc|ENSG00000144642|Q6XE24-3|RBMS3', 'nc|ENSG00000144642|Q6XE24-4|RBMS3', 'nc|ENSG00000144642|Q6XE24-5|RBMS3', 'nc|ENSG00000144642|Q6XE24-2|RBMS3', 'ENSG00000144642|ENST00000383767|RBMS3'] 73896 19805 NAVVELVTV True PC9_epitope_Rep4 942.5385970950199 942.5380449679301 84.306 1 0.04273373358654574 0.00551559918359413 0.032709149358745436 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 137597 7071 YEERVQAVVA True H1975_Epitope_Rep2 1162.59823722946 1162.5971499358602 32.127 2 0.042714341890011415 0.00551559918359413 0.03272213698398683 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 115018 8272 TRATEGMVV True PC9_epitope_Rep1 962.4855159763398 962.48440993586 36.651 2 0.04270466530070393 0.00551559918359413 0.032728619592784565 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 35198 8553 GRADGYVL True PC9_epitope_Rep6 849.43446637965 849.43336993586 42.666 2 0.04270193089698746 0.00551559918359413 0.032730451648281554 ['ENSG00000142937|ENST00000396651|RPS8'] 133670 17712 VYAPPVGGF True PC9_epitope_Rep6 905.4647038787698 905.46360993586 80.762 2 0.04268486613694554 0.00551559918359413 0.032741887105178454 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 17297 15755 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50708496793 65.599 1 0.04262318303114304 0.005530758781292451 0.03278325154747498 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 86506 10331 QLAEIQEAC True H1975_Epitope_Rep2 1003.4644461785899 1003.46334993586 44.748 2 0.0426137462991923 0.005530758781292451 0.03278958383008764 ['ENSG00000076321|ENST00000209884|KLHL20', 'ENST00000493170.1_1_1:173684720-173703518:+|nuORF'] 108614 19922 SYPKIIEEF True PC9_epitope_Rep3 1124.57537652656 1124.57426993586 81.871 2 0.04260507149686395 0.005530758781292451 0.032795405786926725 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-4|FANCD2'] 109022 21721 TAIDILTTV True PC9_epitope_Rep3 945.5382627418501 945.53716993586 88.843 2 0.04260241737737462 0.005530758781292451 0.03279718723883116 ['ENSG00000198700|ENST00000361565|IPO9'] 74823 11284 NHDVQVIL True PC9_epitope_Rep6 936.50288029264 936.50178993586 54.419 2 0.04260119734224609 0.005530758781292451 0.03279800615810687 ['ENSG00000179151|ENST00000315127|EDC3'] 25365 9021 FEADPPGQVAA True H1975_Epitope_Rep2 1100.51383889916 1100.51274993586 39.652 2 0.04257800401554623 0.005530758781292451 0.0328135775390587 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 7973 10369 ATDDSLYY True H1975_Epitope_Rep2 946.39199243098 946.39144496793 44.895 1 0.042572915661237394 0.005530758781292451 0.03281699459310115 ['ENSG00000149260|ENST00000648180|CAPN5'] 111065 14302 THDITTISI True PC9_epitope_Rep4 999.52367530687 999.52256993586 62.913 2 0.04257077656841955 0.005530758781292451 0.03281843118148322 ['ENSG00000047621|ENST00000261250|C12orf4', 'ENST00000544258.1_3_12:4598975-4611546:-|nuORF'] 35167 16064 GQWYGPNTV True PC9_epitope_Rep4 1020.4664947839199 1020.46538993586 69.724 2 0.04256394672150337 0.005530758781292451 0.03282301839236345 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 8742 21937 AVDAFFTAV True PC9_epitope_Rep1 939.4701831820299 939.46908993586 89.198 2 0.04255593624151599 0.005530758781292451 0.03282839928358343 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 17752 6431 EHSGLTTGV True PC9_epitope_Rep1 899.43486030247 899.43376993586 29.542 2 0.04253429897763571 0.005530758781292451 0.03284293758787104 ['ENSG00000110107|ENST00000227524|PRPF19'] 88998 22067 QVIQSLIAL True PC9_epitope_Rep5 983.6015317047498 983.60042993586 89.908 2 0.04252338659225512 0.005530758781292451 0.03285027187931984 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 6952 7230 AQITGTEHL True PC9_epitope_Rep4 968.49270953176 968.49160993586 35.115 2 0.042519946888046355 0.005530758781292451 0.0328525840270893 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 128815 14702 VQAPRLAAL True PC9_epitope_Rep5 937.5709002828098 937.56980993586 61.554 2 0.04251489573252613 0.005530758781292451 0.0328559796415173 ['nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'ENSG00000033100|ENST00000035307|CHPF2'] 20758 16633 EQFHQFLEA True PC9_epitope_Rep5 1147.52982331647 1147.5287299358602 68.985 2 0.04248290059404289 0.005530758781292451 0.032877495378125565 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF', 'DUS3L|p.E258Kfs*28|1|0.17|ENSG00000141994|chr19:5789335-5789335|C/-|frameshift_variant'] 108197 5754 SYGKQTNVL True NCI_RA007_Epitope_Rep4 1008.52400966004 1008.52290993586 28.751 2 0.04248211304705808 0.005530758781292451 0.03287802513503869 ['ENSG00000175336|ENST00000398189|APOF'] 105216 12975 SRIARALAL True PC9_epitope_Rep1 969.6083484206899 969.60724993586 54.78 2 0.042479336179729564 0.005530758781292451 0.03287989310204294 ['ENSG00000142871|ENST00000451137|CCN1'] 108393 15924 SYLHEPAVL True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 66.243 2 0.042476787175265825 0.005530758781292451 0.0328816078703561 ['ENSG00000167306|ENST00000285039|MYO5B', 'MYO5B|p.L1524Tfs*10|1|0.05|ENSG00000167306|chr18:49843282-49843283|-/T|frameshift_variant', 'MYO5B|p.I1001Dfs*12|1|0.24|ENSG00000167306|chr18:49894986-49894987|-/T|frameshift_variant', 'MYO5B|p.M621*|1|0.11|ENSG00000167306|chr18:49937289-49937289|T/-|frameshift_variant', 'ENST00000541028.5_1_15:52553308-52587917:-|nuORF', 'nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A', 'ENSG00000128833|ENST00000261839|MYO5C', 'nc|ENSG00000128833|Q9NQX4-2|MYO5C'] 77180 8391 NRSDPVTL True PC9_epitope_Rep1 900.46649478392 900.46538993586 37.112 2 0.04245349402553134 0.005530758781292451 0.03289728129564992 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 67815 21569 LTAEDLFEA True PC9_epitope_Rep5 1007.4811417885498 1007.48057496793 88.005 1 0.042442030248697867 0.005530758781292451 0.032904997416894496 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 136276 13019 WSDQNIEYEY True H1975_Epitope_Rep1 1345.54626122625 1345.54516993586 55.161 2 0.042440591323383084 0.005530758781292451 0.03290596605135693 ['ENSG00000196757|ENST00000254321|ZNF700'] 27994 18535 FQLEHIM[Oxidation]DL True PC9_epitope_Rep4 1160.5535959166 1160.5524899358602 79.369 2 0.04243183222799073 0.005530758781292451 0.032911862909893355 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 98489 18510 SFITSSWTF True NCI_RA007_Epitope_Rep4 1074.5022115863 1074.50110993586 80.113 2 0.04242828739795554 0.005530758781292451 0.03291424964859074 ['ENSG00000116209|ENST00000234831|TMEM59', 'TMEM59|p.A158S|1|0.12|ENSG00000116209|chr1:54043444-54043444|C/A|missense_variant'] 1392 7154 AEEEAAVVAA True H1975_Epitope_Rep3 958.4607406971397 958.4601949679301 32.49 1 0.04242258521258293 0.005530758781292451 0.0329180892564038 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 54450 13227 KYGALVNNF True PC9_epitope_Rep4 1024.53418042092 1024.53308993586 58.773 2 0.04241858932029734 0.005530758781292451 0.03292078015383325 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 122136 11932 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.46360993586 50.974 2 0.04241719835014739 0.005530758781292451 0.03292171690058788 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 4090 6894 AHQQSIPAV True PC9_epitope_Rep2 949.4981292653698 949.49702993586 31.919 2 0.042409985726367255 0.005530758781292451 0.03292657460664169 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 14462 17050 DTEPPPLLVY True H1975_Epitope_Rep3 1142.5859412102598 1142.58537496793 71.183 1 0.042404706037696784 0.005530758781292451 0.032930130878890226 ['ENSG00000174231|ENST00000304992|PRPF8'] 101768 13060 SLNRYFIKV True PC9_epitope_Rep6 1138.6498788795 1138.6482449037899 61.841 3 0.04239247978051806 0.005530758781292451 0.032938367488939795 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'nc|ENSG00000141568|Q01167-2|FOXK2', 'ENSG00000141568|ENST00000335255|FOXK2'] 71983 5310 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 25.476 1 0.04238778525807545 0.005530758781292451 0.032941530585161645 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 38074 10626 HAVGDIPGV True PC9_epitope_Rep4 863.45011644379 863.4495649679301 48.624 1 0.04237501581615432 0.005530758781292451 0.03295013578625267 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 77943 20168 NVLDHFSEL True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 82.625 2 0.04236768959368608 0.005530758781292451 0.03295507374653412 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 753 14691 AAVPGKTFVNI True PC9_epitope_Rep4 1115.63389446219 1115.63278993586 64.442 2 0.04236201426345667 0.005530758781292451 0.0329588994326774 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 114512 6013 TQAPAVATT True PC9_epitope_Rep3 858.44469671018 858.44358993586 28.182 2 0.04236052147398913 0.005530758781292451 0.03295990577264417 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF'] 54416 13281 KYFLKPEVL True PC9_epitope_Rep6 1135.6641319613097 1135.66302993586 62.739 2 0.0423431010804097 0.005530758781292451 0.03297165144515297 ['nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 14279 14118 DSTLIM[Oxidation]QL True H1975_Epitope_Rep1 935.4633839298699 935.46283496793 59.474 1 0.042336876101475886 0.005530758781292451 0.032975849518541656 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 93548 7607 RQLGSKYIL True NCI_RA007_Epitope_Rep4 1076.6342288153598 1076.63312993586 35.913 2 0.04233620920837236 0.005530758781292451 0.03297629929347074 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 55546 12949 LAGPVVEI True H1975_Epitope_Rep1 796.4694549060399 796.46890496793 54.883 1 0.0423322734559155 0.005530758781292451 0.03297895380577109 ['ENSG00000197403|ENST00000641846|OR6N1'] 133655 9518 VYANGIRNI True PC9_epitope_Rep4 1018.5559784946599 1018.55488993586 44.222 2 0.0423232238471926 0.005530758781292451 0.03298505812740553 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 58039 5397 LEIEDAHGHTP True H1975_Epitope_Rep3 1217.56766537717 1217.5660049037901 25.824 3 0.042320379504072546 0.005530758781292451 0.03298697695507697 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 65782 7729 LSDGVAVLK True NCI_RA007_Epitope_Rep4 900.5280324113199 900.52692993586 36.402 2 0.0423169823455716 0.005530758781292451 0.0329892688470133 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 27426 22301 FLYPFPLAL True H1975_Epitope_Rep2 1079.60555445603 1079.60497496793 92.162 1 0.042313081268116275 0.005530758781292451 0.03299190088018725 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 16316 5641 EEGPPPPSP True H1975_Epitope_Rep2 905.4130622287299 905.41196993586 26.697 2 0.04229798491663369 0.005530758781292451 0.03300208803397622 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'SMC4|p.L270Ffs*8|1|0.17|ENSG00000113810|chr3:160412042-160412042|G/-|frameshift_variant', 'ENST00000468653.5_1_3:160117521-160130242:+|nuORF'] 109712 6998 TEDLRKYVT True H1975_Epitope_Rep2 1123.5873381925899 1123.58569490379 31.842 3 0.0422723612116874 0.005530758781292451 0.03301938546311281 ['ENSG00000104331|ENST00000262644|BPNT2'] 76660 10449 NQSDTSVSL True PC9_epitope_Rep2 949.43525422529 949.43414993586 45.512 2 0.04227102670150648 0.005530758781292451 0.03302028654991108 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 47359 13788 IVGPVVGL True H1975_Epitope_Rep3 752.4796256669199 752.47907496793 58.338 1 0.042268101785044455 0.005530758781292451 0.03302226158496539 ['ENSG00000152348|ENST00000282185|ATG10'] 102680 15990 SLYPGTETM True PC9_epitope_Rep2 997.44264810485 997.4415499358599 66.758 2 0.04226146196055959 0.005530758781292451 0.0330267454778533 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant', 'nc|ENSG00000197321|O95425-2|SVIL'] 1293 7681 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 34.497 1 0.042260088143065616 0.005530758781292451 0.033027673287562606 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 135113 9602 WEEETVPTT True H1975_Epitope_Rep3 1090.4818700645399 1090.48127496793 41.947 1 0.04225239867403928 0.005530758781292451 0.03303286680453127 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 98056 5534 SEQPRGPIP True H1975_Epitope_Rep2 979.5086939490698 979.50758993586 26.295 2 0.042248135214135986 0.005530758781292451 0.03303574668181132 ['ENST00000450873.6_2_7:66236975-66240294:+|nuORF'] 134213 15557 VYMDWYEKF True NCI_RA007_Epitope_Rep2 1279.5583465634297 1279.55724993586 65.22 2 0.04224633626355921 0.005530758781292451 0.03303696190112453 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 28124 6651 FRAPNTDAA True PC9_epitope_Rep1 961.4617437566499 961.46064993586 30.387 2 0.042243560890673146 0.005530758781292451 0.033038836785991246 ['nc|ENSG00000147394|O15231-4|ZNF185', 'nc|ENSG00000147394|O15231-7|ZNF185', 'nc|ENSG00000147394|O15231|ZNF185', 'nc|ENSG00000147394|O15231-3|ZNF185', 'nc|ENSG00000147394|O15231-8|ZNF185', 'nc|ENSG00000147394|O15231-6|ZNF185', 'ENSG00000147394|ENST00000695776|ZNF185', 'nc|ENSG00000147394|O15231-5|ZNF185'] 8105 14723 ATDYTFAMY True H1975_Epitope_Rep3 1081.44264810485 1081.44207496793 62.007 1 0.04223495715342551 0.005530758781292451 0.0330446495776624 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 27509 21613 FMPPGLQEL True PC9_epitope_Rep3 1030.5157534754599 1030.51464993586 88.431 2 0.04223335332156805 0.005530758781292451 0.0330457332456488 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 134439 22395 VYPNWAIGL True PC9_epitope_Rep3 1031.5440168286298 1031.54290993586 91.422 2 0.04221553433084993 0.005530758781292451 0.03305777517896442 ['ENSG00000131389|ENST00000622186|SLC6A6'] 77978 16874 NVPDSFNEV True PC9_epitope_Rep1 1019.45598966987 1019.4554749679301 69.729 1 0.042213716880676086 0.005530758781292451 0.03305900361391557 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 104190 18896 SQFPGAITL True PC9_epitope_Rep6 932.4967322830399 932.49618496793 85.33 1 0.04221198489196438 0.005530758781292451 0.03306017432179759 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 26211 9072 FHDLEGNAV True PC9_epitope_Rep6 1000.4614094034799 1000.46030993586 44.961 2 0.042209229190864284 0.005530758781292451 0.03306203706542207 ['ENSG00000099219|ENST00000339450|ERMP1'] 24245 17431 EYSKYLQQAF True PC9_epitope_Rep2 1275.6135529404298 1275.61244993586 72.301 2 0.042202617324690855 0.005530758781292451 0.033066506798002604 ['nc|ENSG00000162702|Q9Y2X9-2|ZNF281', 'ENSG00000162702|ENST00000367353|ZNF281'] 48024 13673 IYLPEVRKI True PC9_epitope_Rep4 1129.68593003505 1129.68427490379 60.484 3 0.04219138095091997 0.005530758781292451 0.03307410399212991 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 110109 3929 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep3 1063.39504666987 1063.39394993586 20.24 2 0.04218460527365453 0.005530758781292451 0.03307868593799568 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 101295 16315 SLIGHLQTL True PC9_epitope_Rep6 980.5654805492001 980.56438993586 75.121 2 0.042181343796661275 0.005530758781292451 0.03308089165949498 ['DUSP5|p.S336C|1|0.22|ENSG00000138166|chr10:110510278-110510278|C/G|missense_variant', 'ENSG00000138166|ENST00000369583|DUSP5'] 653 8514 AATAVTQAL True NCI_RA007_Epitope_Rep5 844.4654321547599 844.46432993586 39.433 2 0.042167268723901925 0.005530758781292451 0.03309041204567472 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 7381 4817 ARSTDQTVL True PC9_epitope_Rep2 989.51417325233 989.51306993586 23.897 2 0.04216118379817942 0.005530758781292451 0.033094528637007375 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 57647 10489 LEEELGRDWQA True H1975_Epitope_Rep3 1344.6309939097198 1344.62988993586 45.409 2 0.042126252546914295 0.005530758781292451 0.03311816912511854 ['nc|ENSG00000123815|Q96D53-2|COQ8B', 'ENSG00000123815|ENST00000324464|COQ8B'] 101718 18222 SLNDCFVKV True PC9_epitope_Rep5 1023.5059170677499 1023.50480993586 75.103 2 0.04212529719730268 0.005530758781292451 0.033118815887036655 ['ENSG00000176678|ENST00000320241|FOXL1', 'FOXQ1|p.L181P|1|0.15|ENSG00000164379|chr6:1313246-1313246|T/C|missense_variant', 'ENSG00000164379|ENST00000296839|FOXQ1'] 27941 19789 FQEGDIILV True PC9_epitope_Rep6 1032.5491617787197 1032.5480699358602 88.774 2 0.042121841389379445 0.005530758781292451 0.03312115552624353 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 96471 15421 SAAMVFSAL True NCI_RA007_Epitope_Rep3 895.4473395624699 895.44624993586 68.212 2 0.04210036520759605 0.005530758781292451 0.03313569850926735 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 28774 14087 FSTALYGESDL True H1975_Epitope_Rep3 1201.55028397753 1201.54918993586 59.513 2 0.04209003142584302 0.005553265271479497 0.03314269821246668 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 128235 19044 VPNPYIISA True PC9_epitope_Rep2 972.5280324113199 972.52692993586 78.618 2 0.04208986702157228 0.005553265271479497 0.03314280958403332 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 1378 12143 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43397496793 51.792 1 0.04208563521297968 0.005553265271479497 0.03314567643009823 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 106732 10670 STVSSVTQV True PC9_epitope_Rep1 906.4658260775799 906.46472993586 45.932 2 0.042061612728091904 0.005553265271479497 0.03316195462869275 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1'] 47587 11655 IVVNLTGR True PC9_epitope_Rep5 870.5287011176599 870.52760993586 49.826 2 0.042054263172175574 0.005553265271479497 0.03316693626133499 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 114826 16786 TQLPESTSLRL True PC9_epitope_Rep1 1243.67721582615 1243.67610993586 69.392 2 0.04204600610454738 0.005553265271479497 0.03317253380156237 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000567743.5_1_16:66851261-66857485:-|nuORF'] 136337 11612 WTDGSTLQY True H1975_Epitope_Rep2 1069.47163973401 1069.4705499358602 49.733 2 0.042018900647143226 0.005553265271479497 0.033190914662093986 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 103494 7982 SPQQPGLSA True PC9_epitope_Rep3 883.4399456829099 883.43884993586 35.68 2 0.04201579864184119 0.005553265271479497 0.033193018776074466 ['ENSG00000170498|ENST00000367194|KISS1'] 5912 16379 APGNPVLAV True PC9_epitope_Rep2 836.4756029156399 836.4745099358599 68.248 2 0.04201547445066784 0.005553265271479497 0.033193238684188366 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 39069 6958 HHSNLIAGM True PC9_epitope_Rep6 978.47053461854 978.46942993586 35.715 2 0.042009256168600566 0.005553265271479497 0.03319745696960296 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 136425 19943 WVDETLSSV True PC9_epitope_Rep5 1034.49204082542 1034.49147496793 81.765 1 0.04200577557705209 0.005553265271479497 0.03319981829789028 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 31864 11406 GELGAIAQV True NCI_RA007_Epitope_Rep3 856.4654321547599 856.46432993586 51.99 2 0.04199787053306936 0.005553265271479497 0.033205181842924654 ['ENSG00000113657|ENST00000343218|DPYSL3', 'nc|ENSG00000113657|Q14195|DPYSL3'] 80375 9188 PGHLQEGF True PC9_epitope_Rep5 883.41881631551 883.41770993586 40.286 2 0.04198406959404933 0.005553265271479497 0.03321454755476455 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 6804 9071 AQEPGNYEV True PC9_epitope_Rep6 1005.4403396057298 1005.43924993586 44.957 2 0.04197742278897921 0.0055713005353293125 0.03321905909366663 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 2864 12322 AEVFPPPVA True H1975_Epitope_Rep2 925.4909186266098 925.49037496793 52.481 1 0.04196638531228513 0.0055713005353293125 0.03322655200186797 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 69845 7424 LVHELDEAEYR True NCI_RA007_Epitope_Rep2 1372.6622940379998 1372.6606349037902 33.505 3 0.0419566513402896 0.0055713005353293125 0.03323316124255583 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1'] 137467 10758 YEEAAMAIA True H1975_Epitope_Rep2 967.4320834211499 967.43153496793 46.41 1 0.04195538174955059 0.0055713005353293125 0.033234023363222266 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 72334 24359 MIPLLLAAL True PC9_epitope_Rep3 953.5983609006099 953.59726993586 99.012 2 0.041952838183060226 0.0055713005353293125 0.03323575064125106 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 72581 22153 M[Oxidation]LQNFLDL True PC9_epitope_Rep5 1008.49501841132 1008.49392993586 90.249 2 0.041943441967687733 0.0055713005353293125 0.03324213207985334 ['ENSG00000118094|ENST00000264029|TREH'] 73781 21172 NAFSENFLEV True PC9_epitope_Rep4 1168.5400536470001 1168.53894993586 89.601 2 0.04193436235160815 0.0055713005353293125 0.033248299521314036 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 72003 5694 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 26.932 2 0.04193007627914407 0.0055713005353293125 0.0332512112377946 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 12053 7868 DHSVAESL True PC9_epitope_Rep2 856.3926611373201 856.39156993586 35.631 2 0.04192678026750613 0.0055713005353293125 0.03325345051481643 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 15067 21727 DYSDIVTTL True PC9_epitope_Rep2 1025.49170647225 1025.4906099358602 89.049 2 0.041925892179872026 0.0055713005353293125 0.03325405389521233 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF'] 28813 15249 FSVTGRVL True PC9_epitope_Rep3 877.50215201665 877.50104993586 63.802 2 0.04192200607902667 0.0055713005353293125 0.03325669428486106 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 102740 17800 SMTLAIHEI True PC9_epitope_Rep1 1013.52156713189 1013.52046993586 73.262 2 0.041919053116178114 0.0055713005353293125 0.03325870078205596 ['ENSG00000143753|ENST00000323699|DEGS1'] 102861 12149 SPAAPVITA True PC9_epitope_Rep2 825.45961849833 825.4590749679301 52.041 1 0.04191341795489383 0.0055713005353293125 0.03326253009050771 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 130660 10286 VSTEVDARL True PC9_epitope_Rep5 988.5189242795998 988.51782993586 44.552 2 0.041913113628001375 0.0055713005353293125 0.03326273690332349 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 104912 16880 SRDDNMFQI True PC9_epitope_Rep2 1124.49205790876 1124.49147496793 70.176 1 0.04190009430798502 0.0055713005353293125 0.03327158555855443 ['ENSG00000113387|ENST00000265073|SUB1'] 8775 18591 AVDLTLPKV True PC9_epitope_Rep2 954.57498260374 954.57388993586 76.862 2 0.04187254499710322 0.0055713005353293125 0.0332903164132614 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 6314 5401 APRPPTAAP True PC9_epitope_Rep3 876.4817509252399 876.48064993586 25.847 2 0.041857005994728885 0.0055713005353293125 0.033300885504719054 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 133064 20681 VVPQQLLTV True PC9_epitope_Rep3 995.60153170475 995.60042993586 84.823 2 0.04183557548385007 0.0055713005353293125 0.03331546662505878 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 2734 9049 AETDSVVIA True H1975_Epitope_Rep2 903.45492704071 903.4543749679301 39.76 1 0.0418255319338356 0.0055713005353293125 0.03332230209013546 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 64595 12401 LPSRFIESA True PC9_epitope_Rep2 1018.5447451046199 1018.54364993586 53.009 2 0.041814934018135685 0.0055713005353293125 0.03332951618063308 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 2297 11786 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.51128993586 50.481 2 0.041813563846851906 0.0055713005353293125 0.03333044896776202 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 16015 6662 EDTEEYNLR True NCI_RA007_Epitope_Rep1 1167.5043964142699 1167.50328993586 29.925 2 0.041811763274242436 0.0055713005353293125 0.033331674798924536 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 7226 9219 ARDDTHYLL True PC9_epitope_Rep4 1102.54072235334 1102.5396299358601 43.058 2 0.04180659949927719 0.0055713005353293125 0.0333351905200464 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 15213 11421 EADVAQLEY True H1975_Epitope_Rep2 1036.47130538084 1036.47020993586 48.983 2 0.041790297986853915 0.0055713005353293125 0.03334629142822486 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 1216 7945 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.4608749679301 35.508 1 0.041789743732126086 0.0055713005353293125 0.033346668918338436 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 588 11401 AARLPLDAA True PC9_epitope_Rep3 896.5079656730799 896.50686993586 48.857 2 0.04178251734248296 0.0055713005353293125 0.03335159098866875 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 86123 20480 QHWPVFVEV True PC9_epitope_Rep2 1139.5763795860698 1139.5752899358602 84.208 2 0.04177315372000609 0.0055713005353293125 0.03335796972813164 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3'] 73464 15604 MVAPAVASV True PC9_epitope_Rep5 843.4524249429099 843.45187496793 65.032 1 0.041760209694593 0.0055713005353293125 0.033366789291583064 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 3453 9740 AGLAKSIGV True PC9_epitope_Rep2 814.4912529797799 814.49014993586 42.805 2 0.041759960567548285 0.0055713005353293125 0.033366959057271495 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3'] 97286 9783 SEAFSVASAA True H1975_Epitope_Rep2 938.4345259492999 938.43342993586 42.617 2 0.04175498202845218 0.0055713005353293125 0.033370351802871435 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 40577 6533 HRGTGLVL True PC9_epitope_Rep2 851.49773534255 851.49662993586 30.544 2 0.04174729614660377 0.0055713005353293125 0.03337559012655819 ['ENSG00000099812|ENST00000215582|MISP'] 48651 6775 KASAVYQAL True NCI_RA007_Epitope_Rep3 949.5232813840499 949.52218993586 33.749 2 0.04174242404654488 0.0055713005353293125 0.03337891108669815 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 32955 10894 GIDIFTGK True NCI_RA007_Epitope_Rep1 849.45961849833 849.45852993586 46.368 2 0.04173803305159829 0.0055713005353293125 0.03338190436035913 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 78343 14296 NYKDLNGNVF True PC9_epitope_Rep2 1182.5669371011797 1182.5658499358601 60.255 2 0.041729868951091334 0.0055713005353293125 0.03338747032769434 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 45469 22282 IQLPDSVNQLL True PC9_epitope_Rep5 1238.68705223386 1238.6859499358602 90.714 2 0.04167206029736736 0.0055713005353293125 0.0334269053151934 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000469445.1_1_2:27263203-27263702:+|nuORF'] 30667 7248 GALALEEK True PC9_epitope_Rep3 829.4545331178899 829.45342993586 32.89 2 0.041666012677982374 0.0055713005353293125 0.03343103314276723 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 6782 16538 AQDPTAFSV True PC9_epitope_Rep5 934.4396113297399 934.43850993586 68.615 2 0.04166406916440174 0.0055713005353293125 0.03343235979087538 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 8903 14493 AVFPSIVGR True PC9_epitope_Rep6 944.5443511817999 944.54324993586 67.631 2 0.04166383555225954 0.0055713005353293125 0.03343251925832095 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34995 7256 GQTGVIRSV True PC9_epitope_Rep1 915.5137793295099 915.51268993586 32.723 2 0.04166207563184264 0.0055713005353293125 0.03343372063004202 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 856 6871 ADEGISFR True NCI_RA007_Epitope_Rep3 893.42429561877 893.42318993586 34.136 2 0.04166190453539377 0.0055713005353293125 0.03343383742736201 ['ENSG00000117450|ENST00000319248|PRDX1'] 32894 9547 GHSTAVVSL True PC9_epitope_Rep5 869.46068112749 869.45958993586 41.68 2 0.041651653891820954 0.0055713005353293125 0.033440835581885084 ['ENSG00000156463|ENST00000359120|SH3RF2'] 2884 8215 AEVPDVTAT True H1975_Epitope_Rep1 901.43927697657 901.43872496793 36.542 1 0.04163344732379795 0.0055713005353293125 0.03345326844352978 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 134043 14343 VYKAFVDNY True PC9_epitope_Rep1 1117.54441075145 1117.5433099358602 59.994 2 0.04163195078613598 0.0055713005353293125 0.03345429057614452 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 20072 12888 EMEEKYYRF True PC9_epitope_Rep3 1293.5699738762899 1293.56833490379 54.591 3 0.041631185624654135 0.0055713005353293125 0.033454813190681394 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 97971 7128 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 32.35 1 0.04163079594329343 0.0055713005353293125 0.033455079350509814 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 137012 20700 YALDLSTFL True H1975_Epitope_Rep2 1041.53826274185 1041.5371699358602 85.729 2 0.041625982965619215 0.0055713005353293125 0.0334583668594575 ['ENSG00000137331|ENST00000259874|IER3'] 35491 5543 GSLRPFVQK True NCI_RA007_Epitope_Rep4 1030.5923640033798 1030.59126993586 27.917 2 0.04162025250971406 0.005586997533014076 0.03346228142212963 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 41672 20452 IAGPGFINV True PC9_epitope_Rep2 886.49125297978 886.49070496793 84.097 1 0.04160264455526425 0.005586997533014076 0.03347431219944075 ['ENSG00000113643|ENST00000231572|RARS1', 'nc|ENSG00000113643|P54136-2|RARS1', 'ENST00000521939.5_1_5:167913503-167921691:+|nuORF'] 87261 15103 QPMAVVQSV True PC9_epitope_Rep5 957.4953523840499 957.49424993586 63.1 2 0.04159277970901349 0.005586997533014076 0.03348105409265553 ['nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'ENSG00000140464|ENST00000268058|PML'] 2820 7462 AEVDAAMAA True H1975_Epitope_Rep3 847.3745685450299 847.3740149679301 33.682 1 0.04159181333876442 0.005586997533014076 0.0334817145992997 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 25204 14446 FDDPGLM[Oxidation]L True H1975_Epitope_Rep3 922.4106200810199 922.4100749679301 60.923 1 0.041581947948178384 0.005586997533014076 0.03348845817157661 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 134761 18081 VYTSVVEEL True PC9_epitope_Rep6 1037.5280919809697 1037.52698993586 82.184 2 0.041557115242006615 0.005586997533014076 0.03350543805148625 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 111216 15980 THISPNAIF True PC9_epitope_Rep5 998.5185303567799 998.51742993586 66.458 2 0.04155095350831371 0.005586997533014076 0.03350965243365099 ['ENSG00000125398|ENST00000245479|SOX9'] 142821 13659 YYSPHGHILVL True PC9_epitope_Rep6 1297.68190728377 1297.68025490379 64.322 3 0.04151236397568629 0.005586997533014076 0.03353605671679156 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 129366 15325 VRDGATLIL True PC9_epitope_Rep5 956.5654805492 956.56438993586 63.958 2 0.04150915346604434 0.005586997533014076 0.03353825427919971 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 71756 4163 M[Oxidation]EERAQLEA True H1975_Epitope_Rep2 1091.4917239360298 1091.4906299358602 21.114 2 0.041508486582050384 0.005586997533014076 0.03353871077059392 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2'] 105458 16197 SRVEAVYVL True PC9_epitope_Rep5 1034.5760452328998 1034.57494993586 67.293 2 0.04150353024650244 0.005586997533014076 0.0335421036220412 ['nc|ENSG00000117115|Q9Y2J8-2|PADI2', 'ENSG00000117115|ENST00000375486|PADI2'] 110973 9109 THANALTVM True PC9_epitope_Rep4 956.4749512926401 956.47384993586 42.624 2 0.041500973315903716 0.005586997533014076 0.03354385408235594 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 23860 20777 EYIQFVPLL True NCI_RA007_Epitope_Rep5 1120.6168474157198 1120.61574993586 86.892 2 0.04149257166031868 0.005586997533014076 0.03354960637232252 ['ENSG00000179409|ENST00000319004|GEMIN4'] 100409 15098 SLADAINTEF True NCI_RA007_Epitope_Rep3 1079.51350454599 1079.5124099358602 66.874 2 0.0414754732785865 0.005586997533014076 0.033561315645880836 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 28477 11771 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44417496793 50.269 1 0.04144492368507825 0.005586997533014076 0.0335822454632708 ['ENSG00000170779|ENST00000336219|CDCA4'] 102866 11621 SPAAPVITA True PC9_epitope_Rep4 825.45961849833 825.45852993586 52.459 2 0.04144356051304283 0.005586997533014076 0.03358317965194939 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 85907 9427 QHGDVVSAI True PC9_epitope_Rep1 924.46649478392 924.46538993586 41.119 2 0.0414328293277503 0.005586997533014076 0.03359053458275645 ['ENSG00000109062|ENST00000262613|NHERF1', 'nc|ENSG00000109062|O14745-2|NHERF1'] 21820 6984 ERYSGNQVL True PC9_epitope_Rep4 1064.5250722892 1064.5239699358601 34.109 2 0.041418572712261355 0.005586997533014076 0.03360030795329264 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 67631 19381 LSVPGLVSV True PC9_epitope_Rep6 869.52221875489 869.52112993586 87.201 2 0.04141441504251141 0.005586997533014076 0.03360315863951953 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 78701 6448 PAAAAAAAAAA True PC9_epitope_Rep2 825.4344663796498 825.43336993586 30.216 2 0.041409819620754386 0.005586997533014076 0.03360630971488173 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 4139 10694 AHSVQPLSL True PC9_epitope_Rep6 950.51853035678 950.51742993586 51.947 2 0.04139943369232387 0.005586997533014076 0.0336134322878522 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 28004 19924 FQLPIRFNL True PC9_epitope_Rep6 1146.65496425994 1146.65386993586 89.296 2 0.04139162466552814 0.005586997533014076 0.033618788516851565 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3', 'ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000509410.1_1_5:33461160-33466106:+|nuORF'] 115537 12639 TRSAIILHL True PC9_epitope_Rep4 1022.62366413166 1022.62256993586 56.457 2 0.04137799630025013 0.005586997533014076 0.03362813803472191 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1', 'ENST00000518921.1_1_8:63055996-63056374:-|nuORF'] 64707 17014 LPVWLENHTA True PC9_epitope_Rep4 1178.60840799034 1178.60730993586 73.437 2 0.041362491332671676 0.005586997533014076 0.03363877773542486 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 128099 21353 VPLGNLIVV True PC9_epitope_Rep4 922.5851533646199 922.58404993586 90.302 2 0.04135867086019214 0.005586997533014076 0.03364139984382693 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 71793 19109 MEGLSWLV True H1975_Epitope_Rep1 933.4629896266099 933.4624449679301 79.64 1 0.041355975769076576 0.005586997533014076 0.033643249675923144 ['ENST00000378119.8_1_6:24720562-24720727:-|nuORF'] 7331 9520 ARPPGYEF True PC9_epitope_Rep4 935.45011644379 935.44900993586 44.229 2 0.041333583327257895 0.005586997533014076 0.03365862264289971 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 28096 18113 FQVQGVQNL True PC9_epitope_Rep4 1031.5399940773498 1031.5388899358602 77.738 2 0.04132761121730639 0.005586997533014076 0.03366272368403191 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 105082 11715 SRDSSILIA True PC9_epitope_Rep5 960.52400966004 960.52290993586 50.06 2 0.041323202668875084 0.005586997533014076 0.033665751310097004 ['ENST00000327320.8_2_11:85989390-85989564:+|nuORF', 'ENST00000528250.1_1_11:85988947-85989564:+|nuORF', 'ENSG00000074266|ENST00000263360|EED', 'nc|ENSG00000074266|O75530-2|EED'] 90425 9312 REIIINAV True NCI_RA007_Epitope_Rep4 926.5549158654999 926.55380993586 42.675 2 0.04132287247845753 0.005586997533014076 0.033665978082120934 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 73532 16330 MVPEDVPRL True PC9_epitope_Rep1 1054.5481162329 1054.5470099358602 67.632 2 0.04132089781475533 0.005586997533014076 0.03366733429261042 ['ENSG00000272333|ENST00000420124|KMT2B'] 26207 10164 FHDLEGNAV True PC9_epitope_Rep2 1000.4614094034799 1000.46030993586 44.433 2 0.0413152405466923 0.005586997533014076 0.03367122000214885 ['ENSG00000099219|ENST00000339450|ERMP1'] 41122 16291 HTVGELIEV True PC9_epitope_Rep2 995.5287606873098 995.52821496793 67.909 1 0.041300913120356615 0.005586997533014076 0.033681062590432034 ['ENST00000496548.1_1_7:1855708-1869233:-|nuORF', 'nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1'] 57374 13440 LEALPQIAA True H1975_Epitope_Rep2 924.5280324113198 924.52748496793 56.83 1 0.041295217831574534 0.005586997533014076 0.033684975813330055 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 76911 14701 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.5503449679301 61.55 1 0.041271802749483506 0.005586997533014076 0.033701068460327326 ['ENSG00000013523|ENST00000251089|ANGEL1'] 128497 14695 VPSPGLPVSA True PC9_epitope_Rep6 922.5123823471799 922.51128993586 68.458 2 0.04126657588712894 0.005586997533014076 0.03370466168189569 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 117224 18695 TVLNVEGDAL True PC9_epitope_Rep4 1029.5342399905699 1029.5331499358601 79.99 2 0.04125668965139226 0.005586997533014076 0.03371145892081643 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 7853 4912 ATAAAIGATPR True NCI_RA007_Epitope_Rep2 998.55089311422 998.54978993586 23.728 2 0.041256252660012205 0.005586997533014076 0.03371175940007317 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000540626.5_1_11:71714575-71718510:-|nuORF'] 84272 22099 PYNPLWAQL True PC9_epitope_Rep2 1100.5654805492 1100.5643899358602 90.475 2 0.041235507258937446 0.005586997533014076 0.03372602682662131 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 108284 10582 SYIGGHEGL True PC9_epitope_Rep5 931.43994568291 931.43884993586 45.691 2 0.0412185627030931 0.005586997533014076 0.033737684186806435 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 47284 7597 IVDKSGVVRV True PC9_epitope_Rep5 1070.64479349906 1070.64368993586 34.172 2 0.04120290021657771 0.005586997533014076 0.03374846265942654 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000571079.1_1_17:7497531-7497639:-|nuORF', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 85210 8939 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57797496793 39.343 1 0.04118715088474768 0.005586997533014076 0.03375930393758644 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 71249 8870 LYPPRQPTF True NCI_RA007_Epitope_Rep3 1117.59202965021 1117.59092993586 41.981 2 0.04116118307506776 0.005586997533014076 0.03377718591224341 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 82797 9079 PRQVGVVV True PC9_epitope_Rep2 852.5181364339599 852.51702993586 40.265 2 0.041150342862627136 0.005586997533014076 0.03378465316226504 ['ENST00000465651.1_1_1:205561255-205569586:+|nuORF'] 7017 15396 AQMPTIERL True PC9_epitope_Rep5 1057.55901526977 1057.5579099358602 64.228 2 0.04113382424506295 0.005586997533014076 0.03379603474583605 ['ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'ENST00000529565.1_1_11:104815482-104817977:-|nuORF'] 49855 7367 KIDEHHFVAV True PC9_epitope_Rep6 1193.6193070272102 1193.61766490379 37.528 3 0.041130443303231956 0.005586997533014076 0.03379836468109423 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 43859 13270 IHSSIVSTL True PC9_epitope_Rep1 955.5338460677501 955.53274993586 55.908 2 0.041118816095229556 0.005586997533014076 0.033806378504910826 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 57385 9334 LEAPGGIAT True H1975_Epitope_Rep2 827.43888305375 827.43833496793 40.864 1 0.04111403882609397 0.005586997533014076 0.03380967162570948 ['ENST00000470452.5_1_2:237994547-238002319:+|nuORF', 'ENSG00000198612|ENST00000354371|COPS8'] 141097 15878 YSQELSLLY True H1975_Epitope_Rep2 1114.55464108198 1114.5540749679299 66.274 1 0.04110669770157528 0.005586997533014076 0.033814732639595606 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 115490 15111 TRPPALLL True PC9_epitope_Rep4 879.5541875895099 879.55308993586 66.054 2 0.04110638850690619 0.005586997533014076 0.03381494581475509 ['ENSG00000090971|ENST00000205194|NAT14'] 78845 19400 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.42140993586 79.434 2 0.04108629323309307 0.005586997533014076 0.03382880308338003 ['ENSG00000163807|ENST00000296121|KIAA1143'] 98948 7533 SHANSAVVL True PC9_epitope_Rep3 896.47158016436 896.47048993586 33.977 2 0.04107573563208428 0.005586997533014076 0.03383608537026597 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 1451 7539 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 33.95 1 0.04106825637091888 0.005586997533014076 0.033841245149930775 ['ENSG00000173545|ENST00000308683|ZNF622'] 67812 21371 LTAEDLFEA True PC9_epitope_Rep2 1007.4811417885498 1007.48057496793 87.673 1 0.04106097455562714 0.005586997533014076 0.03384626937788428 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 120160 3358 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 17.636 2 0.04103297477182586 0.005586997533014076 0.03386559444953783 ['ENSG00000155506|ENST00000518297|LARP1'] 128397 6562 VPRPETAVA True PC9_epitope_Rep3 938.5185303567798 938.51742993586 30.265 2 0.04103157171941779 0.005586997533014076 0.033866563071438906 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 141768 11896 YVADLVHSA True PC9_epitope_Rep5 973.4868958753299 973.48578993586 50.755 2 0.04102301483923355 0.005586997533014076 0.033872470989224274 ['ENSG00000179820|ENST00000391770|MYADM'] 63058 15302 LLQESLAQA True PC9_epitope_Rep5 971.52876068731 971.52766993586 63.869 2 0.04101704484393478 0.005586997533014076 0.03387659338116079 ['ENSG00000168209|ENST00000307365|DDIT4'] 36274 16007 GVDVTLPRV True PC9_epitope_Rep4 954.5498304850599 954.54872993586 69.504 2 0.041016343544607356 0.005586997533014076 0.03387707767011873 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 72987 18011 MQMSPALTC True PC9_epitope_Rep5 980.4129452830399 980.41184993586 74.296 2 0.04099654279949477 0.005586997533014076 0.0338907537658003 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 96961 10888 SAYDGKDYI True PC9_epitope_Rep2 1030.46074069714 1030.4596499358602 47.198 2 0.04099322193100622 0.005586997533014076 0.03389304791611974 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 95060 9129 RTSTGIIGV True PC9_epitope_Rep6 902.5185303567799 902.51742993586 45.218 2 0.040989995265935435 0.005586997533014076 0.03389527711826615 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 54145 15006 KVPEWVDTV True PC9_epitope_Rep6 1071.5600608155898 1071.5589699358602 69.744 2 0.04098773054814761 0.005586997533014076 0.03389684181773221 ['ENSG00000105372|ENST00000598742|RPS19'] 55541 8700 LAGPLRPAA True PC9_epitope_Rep1 864.5181364339599 864.51702993586 38.304 2 0.040979479249260486 0.005608877499214274 0.03390254319670605 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 114799 17689 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 76.066 2 0.040979148035944435 0.005608877499214274 0.03390277207185194 ['ENSG00000119616|ENST00000341162|FCF1'] 126191 9733 VLGAFSDG True NCI_RA007_Epitope_Rep3 764.37046914076 764.36992496793 45.354 1 0.0409671732215078 0.005608877499214274 0.03391104782102538 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 90215 4071 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 20.785 2 0.04096365611380242 0.005608877499214274 0.033913478816877236 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 4089 6799 AHQQSIPAV True PC9_epitope_Rep2 949.4981292653698 949.49702993586 31.558 2 0.04096243225951621 0.005608877499214274 0.03391432477064922 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 5098 13911 ALLGDLTKA True PC9_epitope_Rep6 900.52803241132 900.52692993586 65.349 2 0.04096206726407571 0.005608877499214274 0.03391457706673521 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 64862 16225 LQDQNTYTL True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 67.399 2 0.04095189591764805 0.005608877499214274 0.03392160847542715 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 121200 8481 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 37.574 1 0.04095151517357865 0.005608877499214274 0.03392187170696626 ['ENSG00000052749|ENST00000370992|RRP12'] 72837 7868 MPNGDHIVSA True PC9_epitope_Rep4 1039.47567956863 1039.4745899358602 37.686 2 0.040942896161099106 0.005608877499214274 0.033927831033074625 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 13931 11522 DRAGSIVL True PC9_epitope_Rep2 829.46576650793 829.46466993586 49.647 2 0.04094037156557551 0.005608877499214274 0.03392957675320644 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 71931 9601 MEQQTLSIA True H1975_Epitope_Rep1 1019.4957463068699 1019.4951749679301 41.855 1 0.04093645443499908 0.005608877499214274 0.033932285546192306 ['ENSG00000104738|ENST00000649973|MCM4'] 54470 6024 KYGPIRQI True PC9_epitope_Rep6 973.5709002828098 973.56980993586 31.515 2 0.04093279835074765 0.005608877499214274 0.03393481398996419 ['ENST00000478050.1_1_2:24296944-24299099:-|nuORF', 'ENSG00000115128|ENST00000233468|SF3B6'] 100937 9219 SLFGSPVAK True NCI_RA007_Epitope_Rep2 904.50181766348 904.50072993586 40.469 2 0.04092558340384527 0.005608877499214274 0.03393980412567215 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 134443 22446 VYPNWAIGL True PC9_epitope_Rep5 1031.5440168286298 1031.54347496793 91.339 1 0.0409250293110714 0.005608877499214274 0.03394018738417464 ['ENSG00000131389|ENST00000622186|SLC6A6'] 88612 4940 QTDRANRFEY True H1975_Epitope_Rep2 1298.6003624877799 1298.59870490379 24.085 3 0.04090563576130415 0.005608877499214274 0.03395360402801576 ['ENSG00000153147|ENST00000283131|SMARCA5', 'SMARCA5|p.F300Lfs*9|1|0.09|ENSG00000153147|chr4:143527965-143527966|-/ACATCACG|frameshift_variant'] 71166 11325 LYMKNGQGF True PC9_epitope_Rep5 1056.5062514209196 1056.5051499358601 48.556 2 0.04090112055830501 0.005608877499214274 0.03395672835491943 ['nc|ENSG00000127314|P61224-4|RAP1B', 'ENST00000494982.1_1_1:112233982-112249293:+|nuORF', 'nc|ENSG00000127314|P61224-3|RAP1B', 'nc|ENSG00000254893|A6NIZ1|RAP1BL', 'ENSG00000127314|ENST00000250559|RAP1B', 'ENSG00000116473|ENST00000369709|RAP1A'] 103323 20625 SPLTSIISA True PC9_epitope_Rep5 887.49639792987 887.49530993586 84.385 2 0.04089666191837342 0.005608877499214274 0.033959813789529975 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 79273 8774 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 38.692 2 0.0408841105079856 0.0056272037868907885 0.033968500840254934 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 106800 17931 SVAESLNYV True PC9_epitope_Rep1 980.48147614172 980.48036993586 73.763 2 0.04086497601776417 0.0056272037868907885 0.03398174789832441 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 44186 8861 IIYGGSVTG True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 39.086 1 0.04082728114588149 0.0056272037868907885 0.03400785777910208 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 44647 7314 ILSGVVTK True PC9_epitope_Rep2 815.51165407119 815.51054993586 33.517 2 0.04080901911562821 0.0056272037868907885 0.03402051354205602 ['ENSG00000142534|ENST00000270625|RPS11'] 108158 16307 SYFSGSHMF True PC9_epitope_Rep4 1061.4276667470501 1061.42656993586 70.686 2 0.040806964670605204 0.0056272037868907885 0.03402193755013558 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 117158 13886 TVLDKTLSV True PC9_epitope_Rep4 974.5648118428601 974.56370993586 61.314 2 0.04079957401162834 0.0056272037868907885 0.03402706070706344 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF', 'ENST00000432615.5_1_7:158447451-158457424:-|nuORF'] 122138 11851 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.4641549679301 50.732 1 0.04079113154186181 0.0056272037868907885 0.0340329137984471 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 122402 14117 VGDPSVHLL True PC9_epitope_Rep4 935.5076313199099 935.50652993586 62.207 2 0.04078296286801052 0.0056272037868907885 0.03403857790808862 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 103941 17771 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51289496793 73.555 1 0.04077612543489619 0.0056272037868907885 0.034043319577533065 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 35862 5108 GTMKAQGVLLK True NCI_RA007_Epitope_Rep3 1144.6638146914797 1144.6627099358602 27.084 2 0.04076979359341307 0.0056272037868907885 0.03404771114131041 ['nc|ENSG00000166482|P55083-2|MFAP4'] 138328 11791 YHDYGHLEL True PC9_epitope_Rep4 1145.51417325233 1145.51251490379 53.123 3 0.04076209347446406 0.0056272037868907885 0.03405305236674995 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 103743 12621 SPVPIAPTA True PC9_epitope_Rep4 851.47526856247 851.47416993586 56.386 2 0.04075962353936118 0.0056272037868907885 0.034054765804699585 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 138303 5665 YHDEADQSAL True PC9_epitope_Rep6 1147.47818166643 1147.47708993586 29.895 2 0.040755734376312976 0.0056272037868907885 0.03405746393924981 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 63687 11858 LMVDHVTEV True PC9_epitope_Rep6 1041.51648175145 1041.5153899358602 56.822 2 0.04074846973891958 0.0056272037868907885 0.034062504334167416 ['ENST00000602875.5_1_5:139930287-139937028:-|nuORF', 'ENSG00000213523|ENST00000336283|SRA1'] 119627 9888 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 42.991 2 0.04073504992630041 0.0056272037868907885 0.03407181706672591 ['CON__P00761'] 118510 15822 TYQDIQNTI True PC9_epitope_Rep2 1094.52440358286 1094.52387496793 66.118 1 0.04072976963196001 0.0056272037868907885 0.034075481958742264 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 117882 11684 TWFNQPARKI True PC9_epitope_Rep2 1259.6774906096698 1259.67583490379 50.273 3 0.04072840724172421 0.0056272037868907885 0.03407642760842338 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 26646 17717 FIPPDGNFRL True PC9_epitope_Rep6 1174.61349337078 1174.6123899358602 80.783 2 0.04072371637801189 0.0056272037868907885 0.03407968376289227 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 72784 18446 MPAGSFITA True PC9_epitope_Rep5 893.43168949833 893.43058993586 75.973 2 0.0407216943756964 0.0056272037868907885 0.0340810874160619 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 1993 6141 AEIPETSNA True H1975_Epitope_Rep3 930.4294405688601 930.42834993586 28.632 2 0.04071120916582202 0.0056272037868907885 0.0340883669519424 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 137861 9754 YESSTASALVA True NCI_RA007_Epitope_Rep1 1097.52406922969 1097.5229699358601 41.942 2 0.04071034746596018 0.0056272037868907885 0.034088965262264265 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 132203 17706 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 72.902 2 0.040690447526555026 0.0056272037868907885 0.034102785087971044 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 108418 18017 SYLPFTEAF True NCI_RA007_Epitope_Rep3 1073.5069626135698 1073.5058699358601 78.949 2 0.04068693401581397 0.0056272037868907885 0.03410522560976639 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 103087 21974 SPGTALILLEA True PC9_epitope_Rep2 1083.61757569171 1083.61707496793 89.999 1 0.04067206658661611 0.0056272037868907885 0.03411555437493217 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 43824 18727 IHSEPLGVVL True PC9_epitope_Rep3 1062.60734536118 1062.6062499358602 77.257 2 0.04066906866098024 0.0056272037868907885 0.034117637438389116 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 1098 11082 AEALPSLAA True NCI_RA007_Epitope_Rep3 841.4545331178899 841.4539849679301 50.691 1 0.04065599634668299 0.0056272037868907885 0.03412672183944094 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 62505 20880 LLIPGLATA True PC9_epitope_Rep4 867.54295419947 867.54184993586 88.472 2 0.04065293129351579 0.0056272037868907885 0.0341288521565713 ['ENSG00000125356|ENST00000371437|NDUFA1'] 1913 2737 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5965849037902 14.585 3 0.04065045610925135 0.0056272037868907885 0.03413057257947465 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 119634 8179 VATVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 41.019 2 0.040647869810313014 0.0056272037868907885 0.03413237031575097 ['CON__P00761'] 43489 15513 IGLFGGAGVGK True PC9_epitope_Rep2 974.5549158654998 974.55380993586 64.946 2 0.04063962639925602 0.0056272037868907885 0.034138100863180636 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 87245 19081 QPLPVILHV True PC9_epitope_Rep4 1014.6226015025001 1014.62150993586 81.485 2 0.04063306571070258 0.0056272037868907885 0.03414266223886874 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 83597 17195 PVCPPGGIQEV True PC9_epitope_Rep1 1094.5430308524599 1094.54192993586 70.96 2 0.04061161234015693 0.0056272037868907885 0.034157581603196645 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 43637 9193 IGYNPDTV True H1975_Epitope_Rep3 877.41814760917 877.4175949679301 40.353 1 0.04060815344352699 0.0056272037868907885 0.03415998756497794 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000443590.1_1_2:107314489-107314633:-|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 10296 5346 C[Carbamidomethyl]C[Carbamidomethyl]TESLVNR True NCI_RA007_Epitope_Rep2 1137.49067856863 1137.48958993586 25.414 2 0.04060449388755928 0.0056272037868907885 0.03416253326406474 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 79976 23073 PEVLLYFLG True PC9_epitope_Rep1 1049.57973363101 1049.57917496793 93.55 1 0.040603449848697674 0.0056272037868907885 0.03416325955985952 ['ENST00000605778.1_1_7:35735152-35735278:+|nuORF'] 85737 10469 QHDDQQPVVL True PC9_epitope_Rep3 1177.5727507576098 1177.57164993586 45.208 2 0.04060008963062923 0.0056272037868907885 0.03416559721994774 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 41281 19901 HVPSTDLILNV True PC9_epitope_Rep1 1206.66083748602 1206.6597499358602 81.367 2 0.04059884288128506 0.0056272037868907885 0.03416646460286666 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'nc|ENSG00000155034|Q96ME1-3|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 82949 7970 PSDPVQPQY True H1975_Epitope_Rep3 1029.4767251144501 1029.47562993586 35.628 2 0.04059875349995211 0.0056272037868907885 0.034166526787590745 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9'] 120044 12391 VDSLLENLEK True NCI_RA007_Epitope_Rep2 1158.61321858726 1158.6121299358601 52.804 2 0.04056563578641701 0.0056272037868907885 0.03418957438500669 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 42857 14935 IEQPTPFLP True H1975_Epitope_Rep3 1040.5542471591598 1040.55367496793 62.834 1 0.040564656098827444 0.0056272037868907885 0.034190256385632736 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 96841 5156 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 25.209 2 0.04056260343040723 0.0056272037868907885 0.03419168537070984 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 97671 8849 SEHGLVVIA True NCI_RA007_Epitope_Rep5 923.5076313199099 923.50652993586 40.702 2 0.040556729806767056 0.0056272037868907885 0.03419577463949737 ['ENSG00000139684|ENST00000378720|ESD'] 79280 7590 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 38.473 2 0.040553455347816715 0.0056272037868907885 0.034198054532503505 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 101847 12951 SLPKGVVEV True PC9_epitope_Rep1 926.54368247546 926.5431349679301 54.687 1 0.04054072278953216 0.005646036916395223 0.03420692103790701 ['ENSG00000149257|ENST00000358171|SERPINH1'] 4774 16998 ALDSTNVEL True PC9_epitope_Rep5 960.47639076128 960.47584496793 70.401 1 0.040537298838111746 0.005646036916395223 0.03420930570013625 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 7934 4887 ATAPPGVLK True NCI_RA007_Epitope_Rep5 852.50690304392 852.50580993586 25.49 2 0.04052384318385296 0.005646036916395223 0.03421867850038046 ['ENSG00000105538|ENST00000222145|RASIP1'] 32131 5917 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40194496793 27.747 1 0.040521101545517 0.005646036916395223 0.03422058851779578 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 86627 5052 QLETLGQEK True NCI_RA007_Epitope_Rep5 1044.5451390274397 1044.5440499358601 26.132 2 0.040517869726850717 0.005646036916395223 0.03422284014891288 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 122139 11945 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.4641549679301 51.102 1 0.04051533859562826 0.005646036916395223 0.034224603696559296 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 11203 4396 DEAQSKRGILT True NCI_RA007_Epitope_Rep4 1216.6411646706 1216.63951490379 23.261 3 0.04050881620026787 0.005646036916395223 0.03422914849531898 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000411655.1_1_10:70782635-70782722:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 60587 9017 LHGPSGSAF True PC9_epitope_Rep5 871.4188163155101 871.41770993586 39.629 2 0.040500758143978174 0.005646036916395223 0.034234764069907955 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 118314 16142 TYLTSIPSL True NCI_RA007_Epitope_Rep5 993.53826274185 993.53716993586 68.825 2 0.040499323107644335 0.005646036916395223 0.034235764216128214 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L'] 6145 12709 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 54.19 2 0.04049555412804669 0.005646036916395223 0.03423839112195862 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 35940 4335 GTSSVIVSR True NCI_RA007_Epitope_Rep4 904.4977949122 904.49668993586 23.018 2 0.04049312430818874 0.005646036916395223 0.03424008475281337 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 141072 10299 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.5223749679301 44.668 1 0.0404864920068201 0.005646036916395223 0.03424470796644902 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 73452 10660 M[Oxidation]VAPAVASV True PC9_epitope_Rep6 859.4473399429099 859.44624993586 51.822 2 0.04048574097244623 0.005646036916395223 0.03424523152838464 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 21757 12283 ERTSFNYAM True PC9_epitope_Rep2 1117.4862442523297 1117.4851499358601 52.557 2 0.040478126397714816 0.005646036916395223 0.03425054020462651 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 110365 7746 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 34.748 1 0.040477048178001504 0.005646036916395223 0.0342512919685054 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 27936 21910 FQEGDIILV True PC9_epitope_Rep1 1032.5491617787197 1032.5485749679299 89.092 1 0.040468560853118465 0.005646036916395223 0.03425721006424698 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 69997 14543 LVLVGDGG True PC9_epitope_Rep2 728.40685464948 728.40630496793 61.211 1 0.04046553642958099 0.005646036916395223 0.034259319169549274 ['ENSG00000132341|ENST00000543796|RAN'] 49267 8000 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 35.721 2 0.04046295604352955 0.005646036916395223 0.03426111871161329 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 102862 12502 SPAAPVITA True PC9_epitope_Rep3 825.45961849833 825.45852993586 53.115 2 0.04045957858855201 0.005646036916395223 0.034263474248516584 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 96792 8407 SAQGKPLAL True PC9_epitope_Rep5 883.5127167003499 883.51160993586 37.278 2 0.04045634596438434 0.005646036916395223 0.03426572890876064 ['ENSG00000100401|ENST00000356244|RANGAP1'] 40413 6070 HQVPAVSSV True PC9_epitope_Rep6 922.4872302285 922.48612993586 31.726 2 0.04044340837164981 0.005646036916395223 0.03427475379763637 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 77015 9168 NRIANPDQL True PC9_epitope_Rep1 1039.5410567065098 1039.53994993586 40.114 2 0.040437937791618486 0.005646036916395223 0.0342785705405159 ['ENSG00000117528|ENST00000370214|ABCD3', 'nc|ENSG00000117528|P28288-3|ABCD3', 'nc|ENSG00000117528|P28288-2|ABCD3'] 124490 7246 VGVNGFGR True PC9_epitope_Rep4 804.4242360491198 804.42312993586 35.177 2 0.040433711251580226 0.005646036916395223 0.034281519589527625 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 87360 5116 QPSQPVTSA True PC9_epitope_Rep5 913.4505103666099 913.4499649679301 24.704 1 0.040433626096488096 0.005646036916395223 0.03428157900838394 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 101851 12189 SLPKGVVEV True PC9_epitope_Rep2 926.54368247546 926.5431349679301 52.198 1 0.04043128323162015 0.005646036916395223 0.034283213829686826 ['ENSG00000149257|ENST00000358171|SERPINH1'] 46200 19844 ISMPDFDLHL True PC9_epitope_Rep6 1186.5692456003 1186.5681499358602 88.99 2 0.04042225855569645 0.005646036916395223 0.03428951177075131 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 102994 16425 SPFGTITSA True PC9_epitope_Rep2 879.43379767331 879.43270993586 68.422 2 0.04041627597619488 0.005646036916395223 0.03429368731842961 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 87393 21544 QPVQLLVEL True PC9_epitope_Rep5 1037.6120963884498 1037.61098993586 87.906 2 0.04039108371074774 0.005646036916395223 0.03431127516446494 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF'] 68338 15349 LTELPPLDDY True H1975_Epitope_Rep1 1174.57577044938 1174.57517496793 64.308 1 0.0403896070142257 0.005646036916395223 0.03431230635691142 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 26887 15769 FLDGNELTL True NCI_RA007_Epitope_Rep3 1020.51277627 1020.51166993586 69.666 2 0.040384657623910296 0.005646036916395223 0.034315762764923895 ['ENSG00000213719|ENST00000375784|CLIC1'] 30223 23225 FYTFPFQQL True PC9_epitope_Rep5 1189.5807962601698 1189.5796899358602 94.318 2 0.040365210276876895 0.005646036916395223 0.034329346772663874 ['ENSG00000139372|ENST00000392872|TDG', 'ENST00000544060.1_1_12:104359692-104373925:+|nuORF', 'TDG|p.G60Efs*45|1|0.29|ENSG00000139372|chr12:103979842-103979842|G/-|frameshift_variant'] 71724 10300 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 44.626 1 0.040365177361053925 0.005646036916395223 0.03432936976841128 ['ENSG00000026025|ENST00000544301|VIM'] 99111 13613 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 57.218 2 0.04036485322440439 0.005646036916395223 0.03432959621841376 ['ENSG00000132646|ENST00000379143|PCNA'] 126013 16442 VLDSFLQGY True H1975_Epitope_Rep2 1040.51786165044 1040.51676993586 68.464 2 0.04033224395203834 0.005646036916395223 0.034352384549752375 ['nc|ENSG00000186185|Q86Y91-6|KIF18B', 'ENSG00000186185|ENST00000593135|KIF18B'] 222 22071 AAFPGASLYL True PC9_epitope_Rep1 1008.5280324113198 1008.52692993586 89.705 2 0.040326214810217774 0.005646036916395223 0.03435659934187555 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 913 5913 ADLSGITK True NCI_RA007_Epitope_Rep2 803.43888305375 803.43778993586 27.617 2 0.040322207615250225 0.005646036916395223 0.03435940090168136 ['CON__P34955', 'ENSG00000100665|ENST00000557004|SERPINA4'] 97305 10052 SEALPSDIAA True H1975_Epitope_Rep1 972.47639076128 972.47528993586 43.604 2 0.04030468165365867 0.005646036916395223 0.03437165621583944 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 84183 11086 PYKVTQDEL True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 47.64 2 0.040291920200262704 0.005646036916395223 0.03438058227379738 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 55095 8355 LAAARLAAA True PC9_epitope_Rep1 826.5024863698198 826.50138993586 36.973 2 0.04028784366608394 0.005646036916395223 0.034383434051546945 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 78538 11441 NYPQSVPRL True PC9_epitope_Rep6 1072.56654317836 1072.5654499358602 55.069 2 0.04028248625620408 0.005669481302774427 0.0343871821923182 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 134777 17691 VYTVVDEMF True NCI_RA007_Epitope_Rep1 1101.5052483614097 1101.5041499358601 72.952 2 0.040279021289492574 0.005669481302774427 0.03438960653582024 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 104033 10270 SQDNVIKVC True PC9_epitope_Rep5 1004.49608066004 1004.49498993586 44.49 2 0.04027894688908185 0.005669481302774427 0.0343896585934138 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 67931 11963 LTDDDLLRY True H1975_Epitope_Rep1 1122.55570371114 1122.55460993586 51.02 2 0.040269137761063466 0.005669481302774427 0.03439652259417918 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 125982 13697 VLDPNTVFA True H1975_Epitope_Rep3 974.50729696674 974.5067449679301 57.979 1 0.04025510083399383 0.005669481302774427 0.034406347107415566 ['CON__P34955'] 35973 21048 GTVEQIVYL True PC9_epitope_Rep3 1020.5491617787197 1020.54806993586 86.24 2 0.040241365223888666 0.005689077453414652 0.03441596310145099 ['ENSG00000182481|ENST00000330459|KPNA2'] 45321 20808 IQAGLLSAL True PC9_epitope_Rep4 884.53311779176 884.53202993586 88.188 2 0.04023603612297425 0.005689077453414652 0.03441969451840646 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 9532 3482 AVYDRPGASPK True NCI_RA007_Epitope_Rep4 1159.5985715826298 1159.59691490379 19.341 3 0.040235343776881156 0.005689077453414652 0.03442017932255699 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 8373 15048 ATLNIIHSV True PC9_epitope_Rep2 966.5498304850599 966.54872993586 63.141 2 0.04022360779748019 0.005689077453414652 0.03442839816025208 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 30141 23628 FYPALADLF True PC9_epitope_Rep2 1055.5327834385898 1055.5322749679299 96.356 1 0.04022267880428966 0.005689077453414652 0.034429048817825665 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 107330 20470 SVLGAITSV True PC9_epitope_Rep2 845.48583324617 845.48472993586 84.167 2 0.0402181473117486 0.005689077453414652 0.03443222278410293 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 23726 17956 EYFKSFNF True PC9_epitope_Rep6 1080.4916469026 1080.4905499358601 81.696 2 0.04021603297320053 0.005689077453414652 0.034433703805121264 ['ENSG00000151470|ENST00000425929|C4orf33'] 14538 8965 DTRLQEVAL True NCI_RA007_Epitope_Rep5 1043.56112344475 1043.56002993586 41.141 2 0.040195162617565026 0.005689077453414652 0.03444832575437866 ['nc|ENSG00000185651|P68036-3|UBE2L3'] 72001 5477 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 26.12 2 0.040163927624155424 0.005689077453414652 0.034470219394014415 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 109906 11882 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.4168749679301 50.854 1 0.04014730292430076 0.005689077453414652 0.03448187715289278 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 43353 5796 IGAEVYHNLK True H1975_Epitope_Rep3 1142.60840799034 1142.60730993586 27.318 2 0.04014442563705552 0.005689077453414652 0.034483895146262725 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 43828 15946 IHSEPLGVVL True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 73.633 2 0.04013946402948257 0.005689077453414652 0.03448737522585348 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 132526 9863 VVDPNDPQM True PC9_epitope_Rep4 1013.44879611445 1013.44768993586 45.589 2 0.04012603059403759 0.005689077453414652 0.03449679899941223 ['ENSG00000151883|ENST00000281631|PARP8'] 114529 11256 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.47578496793 51.069 1 0.04011088452000031 0.005689077453414652 0.03450742691516487 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 71875 9232 MEMPSQPAP True H1975_Epitope_Rep2 986.4201388384598 986.41904993586 40.467 2 0.0401016521134966 0.005689077453414652 0.034513906646615106 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.E805Ffs*3|1|0.08|ENSG00000048028|chr11:113805034-113805035|-/AGGTGAA|frameshift_variant'] 17299 16079 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 66.836 2 0.04009782258207664 0.005689077453414652 0.03451659470143495 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 58791 5263 LESKSVVP True H1975_Epitope_Rep2 857.4858332461699 857.48472993586 25.312 2 0.04009543658670701 0.005689077453414652 0.034518269590553624 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 35384 10519 GSDDGVLAY True H1975_Epitope_Rep2 895.3923267841499 895.39177496793 45.481 1 0.04004618393628688 0.005689077453414652 0.03455285917104514 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 131032 4810 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 23.59 3 0.04004028953612147 0.005689077453414652 0.03455700076975455 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 103513 12927 SPREVFFRV True PC9_epitope_Rep4 1135.61382772395 1135.61218490379 57.608 3 0.04002917806351498 0.005689077453414652 0.03456480923375381 ['nc|ENSG00000087088|Q07812-6|BAX', 'nc|ENSG00000087088|Q07812-4|BAX', 'nc|ENSG00000087088|Q07812-7|BAX', 'nc|ENSG00000087088|Q07812-8|BAX', 'ENST00000513545.5_1_19:49458896-49464890:+|nuORF', 'ENSG00000087088|ENST00000345358|BAX', 'nc|ENSG00000087088|Q07812-5|BAX', 'nc|ENSG00000087088|Q07812-2|BAX'] 109902 11849 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 50.655 1 0.040023759341177995 0.005689077453414652 0.034568617739754545 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 132761 19615 VVINYTEQL True PC9_epitope_Rep1 1077.57062549929 1077.5695299358601 80.276 2 0.03999912617429023 0.005689077453414652 0.034585935586699826 ['ENSG00000095015|ENST00000399503|MAP3K1'] 24232 7304 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56899490379 33.101 3 0.03999848031324538 0.005689077453414652 0.03458638974810132 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 125322 9057 VIPELNGK True PC9_epitope_Rep1 868.50181766348 868.50072993586 39.688 2 0.03998638079122479 0.005689077453414652 0.03459489894345112 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 7256 15748 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.52387496793 68.499 1 0.039985201621671344 0.005689077453414652 0.034595728312339175 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 26888 15696 FLDGNELTL True NCI_RA007_Epitope_Rep3 1020.51277627 1020.51227496793 69.374 1 0.039976675078853226 0.005689077453414652 0.03460172597292774 ['ENSG00000213719|ENST00000375784|CLIC1'] 39534 5951 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 29.574 2 0.03997527671680629 0.005689077453414652 0.034602709682290234 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 29073 16590 FTHSQFIVV True PC9_epitope_Rep4 1076.5654805492 1076.5643899358602 71.789 2 0.03996714427707982 0.005689077453414652 0.03460843111479082 ['ENSG00000136824|ENST00000374793|SMC2'] 25362 8676 FEADPPGQVA True H1975_Epitope_Rep3 1029.47672511445 1029.4761749679299 38.37 1 0.03996634236663542 0.005689077453414652 0.03460899532929091 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 9876 10560 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 51.421 2 0.03996155311475899 0.005689077453414652 0.03461236515631507 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 110285 12691 TESGNVFVV True H1975_Epitope_Rep2 950.4709114580199 950.4703649679301 53.918 1 0.03995763586081647 0.005689077453414652 0.034615121638724454 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 35683 15409 GTELGNELFY True H1975_Epitope_Rep3 1141.5291546101298 1141.52857496793 64.682 1 0.039952073793419175 0.005689077453414652 0.03461903586829281 ['ENSG00000126821|ENST00000247225|SGPP1'] 45599 9072 IQVTKVTQV True PC9_epitope_Rep4 1014.6073453611799 1014.60624993586 42.479 2 0.039944216271141524 0.005689077453414652 0.03462456615191351 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 140175 15137 YQTEIGQTL True PC9_epitope_Rep4 1051.51858992643 1051.51807496793 66.152 1 0.03993910466209918 0.0057111186081256924 0.03462816422028969 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 29351 17138 FVDGSAIQV True PC9_epitope_Rep4 934.47599683846 934.47488993586 73.927 2 0.0399290903191524 0.0057111186081256924 0.034635214276096844 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 41533 20098 HYPPVQVLF True PC9_epitope_Rep5 1098.58621599378 1098.5851099358601 82.353 2 0.039919940902306945 0.0057111186081256924 0.03464165652327919 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 73895 20682 NAVVELVTV True PC9_epitope_Rep3 942.5385970950199 942.5380449679301 84.827 1 0.039911181341311754 0.0057111186081256924 0.034647825247366516 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 137114 16067 YASDVQLIL True H1975_Epitope_Rep2 1020.54916177872 1020.54806993586 67.004 2 0.03990976330701716 0.0057111186081256924 0.03464882395637975 ['nc|ENSG00000123094|Q8NHQ8-2|RASSF8', 'ENSG00000123094|ENST00000689635|RASSF8'] 113579 15686 TLVEAIKQV True PC9_epitope_Rep1 999.5964463243098 999.59534993586 65.158 2 0.03990238500891675 0.0057111186081256924 0.03465402083219355 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 44690 8437 ILTLEERGDQG True NCI_RA007_Epitope_Rep1 1229.62518025329 1229.6240899358602 36.816 2 0.03988012072020672 0.0057111186081256924 0.03466970672421535 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 27394 18704 FLVQNIHTL True PC9_epitope_Rep1 1083.60767971435 1083.60658993586 76.734 2 0.03987021246762289 0.0057111186081256924 0.034676689393264036 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF'] 2263 7653 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.4390649679301 34.415 1 0.03986111137941591 0.0057111186081256924 0.03468310430922938 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 110148 8676 TENSFVVSS True H1975_Epitope_Rep2 968.445090633 968.44398993586 38.333 2 0.03985950751385758 0.0057111186081256924 0.034684234903714084 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 2705 6491 AETAAVTVA True H1975_Epitope_Rep3 831.43379767331 831.43324496793 29.937 1 0.03985199690026321 0.0057111186081256924 0.03468952970229543 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 71742 10931 MEENFAVEA True H1975_Epitope_Rep3 1038.4328116971399 1038.43170993586 47.132 2 0.03983226807102482 0.0057111186081256924 0.034703441405537314 ['ENSG00000026025|ENST00000544301|VIM'] 15906 4751 EDKYEEEIK True NCI_RA007_Epitope_Rep2 1181.5451985970901 1181.5441099358602 23.11 2 0.03982576163330354 0.0057111186081256924 0.034708030461517964 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 104047 3673 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 20.252 2 0.039816607118043516 0.0057111186081256924 0.034714488130398916 ['ENSG00000130935|ENST00000253247|NOL11'] 142119 22096 YVPPELITL True PC9_epitope_Rep3 1043.59029831471 1043.58920993586 90.289 2 0.039799429356811945 0.0057111186081256924 0.034726608292671914 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 109977 14058 TEIDSVPPLP True H1975_Epitope_Rep2 1066.55464108198 1066.5540749679299 59.226 1 0.039765833617834784 0.005730383068884983 0.03475032321324122 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 134244 18919 VYMPDHSYVTI True PC9_epitope_Rep5 1323.61692406871 1323.6158299358601 77.793 2 0.03974712119349651 0.005730383068884983 0.03476353826951048 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF'] 132177 10796 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.49037496793 49.509 1 0.03974695071062502 0.005730383068884983 0.03476365868779575 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 76793 15873 NRAISVIL True PC9_epitope_Rep1 884.5443511817999 884.54324993586 65.864 2 0.039737193568040736 0.005730383068884983 0.0347705511211345 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1'] 37612 21636 GVVTDLITV True PC9_epitope_Rep5 915.52769805815 915.52660993586 88.265 2 0.039736185663803214 0.005730383068884983 0.034771263171401355 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3'] 114420 15532 TPTPVPVV True PC9_epitope_Rep5 808.4694549060399 808.46834993586 64.756 2 0.03972600852459177 0.005730383068884983 0.03477845368934396 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 28975 16158 FTDVPSIQIY True H1975_Epitope_Rep1 1181.5968402471299 1181.59574993586 67.497 2 0.03972450449938732 0.005730383068884983 0.03477951644777409 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2'] 86948 15944 QLVPALAKV True PC9_epitope_Rep2 937.5960524014899 937.59494993586 66.577 2 0.03970214044097566 0.005730383068884983 0.03479532244784034 ['nc|ENSG00000158161|Q99504-2|EYA3', 'nc|ENSG00000158161|Q99504-4|EYA3', 'nc|ENSG00000158161|Q99504-5|EYA3', 'nc|ENSG00000158161|Q99504-3|EYA3', 'ENSG00000158161|ENST00000373871|EYA3'] 121520 17419 VFAGVFNTF True NCI_RA007_Epitope_Rep3 1000.50181766348 1000.50127496793 76.427 1 0.039700134848012256 0.005730383068884983 0.0347967402250723 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 46828 11551 ITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep1 1118.5277749905702 1118.5266699358601 48.9 2 0.03966848171908694 0.005730383068884983 0.034819122872452396 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 28586 7686 FSGGFGAR True PC9_epitope_Rep1 797.3820368839699 797.38092993586 34.387 2 0.03966818804868533 0.005730383068884983 0.03481933059229223 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 32868 9584 GHSEAVISV True PC9_epitope_Rep1 897.45559574705 897.45448993586 41.721 2 0.03965789946934893 0.005730383068884983 0.03482660862418392 ['ENSG00000073536|ENST00000442241|NLE1', 'ENST00000593176.1_1_17:33464206-33469153:-|nuORF'] 115125 11836 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 50.546 2 0.039639526880715974 0.005730383068884983 0.034839608500916025 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 16347 13211 EEIEGLISA True NCI_RA007_Epitope_Rep4 959.4811417885498 959.48004993586 57.941 2 0.03963941219472571 0.005730383068884983 0.03483968966248202 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 90835 4545 RETGSIAAP True NCI_RA007_Epitope_Rep4 900.4664947839198 900.46538993586 23.884 2 0.03963081717069559 0.005730383068884983 0.034845772702477254 ['nc|ENSG00000011258|Q05BQ5-3|MBTD1', 'ENSG00000011258|ENST00000586178|MBTD1'] 98744 11803 SGGPVVVL True H1975_Epitope_Rep3 726.42759009406 726.4270449679301 50.547 1 0.039628038392484674 0.005730383068884983 0.03484773955248822 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 88721 10733 QTHSVFVNV True PC9_epitope_Rep6 1029.5243440132099 1029.5232499358601 52.104 2 0.039607791728291215 0.005730383068884983 0.034862073290674846 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 33580 15321 GLFDEYGSK True PC9_epitope_Rep3 1014.4658260775799 1014.46472993586 64.085 2 0.039601521994152504 0.005730383068884983 0.03486651302692669 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P', 'ENST00000415545.2_1_1:92108345-92109332:+|nuORF'] 77187 7102 NRSDPVTL True PC9_epitope_Rep4 900.46649478392 900.46538993586 34.585 2 0.03959645402696369 0.005730383068884983 0.03487010212624097 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 6331 8108 APRPTIINA True PC9_epitope_Rep4 951.5501648382299 951.54906993586 38.64 2 0.039583288448667237 0.005730383068884983 0.03487942740441558 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 1722 5784 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 27.242 2 0.03958162775395525 0.005730383068884983 0.03488060384152569 ['ENSG00000161847|ENST00000617231|RAVER1'] 104169 17073 SQFPEEILL True NCI_RA007_Epitope_Rep3 1074.55972646242 1074.5586299358602 75.023 2 0.039577886489961286 0.005730383068884983 0.034883254282005324 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 71807 8036 MEGPVRIAA True H1975_Epitope_Rep2 942.4956867372199 942.49458993586 35.86 2 0.03956021449412629 0.005730383068884983 0.03489577610920039 ['ENST00000527967.5_1_11:125932492-125932705:-|nuORF'] 121804 16162 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.42 2 0.039550531017846 0.005730383068884983 0.03490263918287807 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 53763 8821 KSTLINSL True NCI_RA007_Epitope_Rep4 874.51238234718 874.51128993586 40.741 2 0.03954491847091537 0.005730383068884983 0.03490661756238515 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000494824.5_1_2:242255375-242275396:+|nuORF', 'ENST00000484740.1_1_2:242255375-242274650:+|nuORF', 'ENST00000563743.1_1_16:30393079-30393866:-|nuORF', 'ENST00000366210.2_1_2:242263647-242276275:+|nuORF', 'nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1', 'ENST00000563957.6_1_16:30392598-30394125:-|nuORF', 'ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENSG00000180096|ENST00000321367|SEPTIN1'] 115134 11734 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 50.136 2 0.03953793825697355 0.005730383068884983 0.03491156594656899 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 14053 17364 DRNAVIVAL True PC9_epitope_Rep1 969.5607295219299 969.55962993586 71.601 2 0.03953598822110026 0.005730383068884983 0.03491294846724962 ['nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 90205 3289 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 17.372 2 0.03953468178480811 0.005730383068884983 0.034913874720620054 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 33161 10295 GIVEFSGK True PC9_epitope_Rep3 835.44396843419 835.44286993586 44.548 2 0.039524189124909334 0.005730383068884983 0.034921314714145626 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 39212 11592 HIGDAVVI True PC9_epitope_Rep6 822.4599528515 822.45884993586 55.704 2 0.03952306829386488 0.005730383068884983 0.03492210953964772 ['ENSG00000132646|ENST00000379143|PCNA'] 31412 5733 GEAAGSPVP True H1975_Epitope_Rep2 783.37628279719 783.37573496793 27.05 1 0.03951983308810496 0.005730383068884983 0.034924403840188606 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 119618 7026 VATVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 33.704 2 0.03950147879902746 0.005730383068884983 0.03493742258236696 ['CON__P00761'] 109652 15263 TEAPPIIFA True H1975_Epitope_Rep3 957.5171333744499 957.51658496793 64.117 1 0.03949953417814756 0.005730383068884983 0.03493880215474463 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 57511 12215 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49568993586 52.067 2 0.039483645781088345 0.005730383068884983 0.03495007564074752 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 17259 15693 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 65.185 2 0.03947944873341495 0.005730383068884983 0.03495305415242022 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 102901 10513 SPAPQGVTV True PC9_epitope_Rep5 854.4497820906199 854.44868993586 45.425 2 0.039467125232103856 0.0057509986043601715 0.03496180103032859 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 114233 4630 TPMGPGRTV True PC9_epitope_Rep6 914.46438660894 914.46328993586 25.12 2 0.03945674310421387 0.0057509986043601715 0.034969171457398966 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 9260 21429 AVPFSLDSV True PC9_epitope_Rep1 933.48074786573 933.4801949679301 87.265 1 0.039449354409053373 0.0057509986043601715 0.03497441762757563 ['ENSG00000182220|ENST00000636580|ATP6AP2'] 24242 5038 EYSKQMQRF True PC9_epitope_Rep6 1215.57064258263 1215.56899490379 27.006 3 0.039425155851625544 0.0057509986043601715 0.03499160405392442 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant'] 98695 16509 SGFGGITML True H1975_Epitope_Rep3 881.43168949833 881.4311449679301 68.999 1 0.039414567480992396 0.0057509986043601715 0.03499912649871119 ['nc|ENSG00000141219|Q9BSJ5-2|MTNAP1', 'nc|ENSG00000141219|Q9BSJ5-3|MTNAP1', 'ENSG00000141219|ENST00000535032|C17orf80'] 73751 7262 NADPQAVTM True NCI_RA007_Epitope_Rep3 945.42258136661 945.42148993586 35.675 2 0.039412640300642045 0.0057509986043601715 0.0350004958042268 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 120178 3127 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 16.473 2 0.039409137835701956 0.0057509986043601715 0.035002984504944455 ['ENSG00000155506|ENST00000518297|LARP1'] 30671 7352 GALALEEK True PC9_epitope_Rep5 829.4545331178899 829.45342993586 33.238 2 0.039402046433931644 0.0057509986043601715 0.03500802382221594 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 131081 14334 VTDTGALYLY True H1975_Epitope_Rep3 1114.55464108198 1114.55354993586 60.483 2 0.039401618557582764 0.0057509986043601715 0.035008327901478335 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 96096 9828 RYMNHMQSL True PC9_epitope_Rep3 1178.5324832521 1178.5308449037902 42.763 3 0.039383711487741904 0.0057509986043601715 0.0350210560005128 ['ENSG00000166233|ENST00000379887|ARIH1'] 33369 12582 GKVQIPIM[Oxidation]L True NCI_RA007_Epitope_Rep4 1013.5943385297699 1013.59324993586 55.417 2 0.03938043409432225 0.0057509986043601715 0.03502338596360525 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 120501 19703 VEFDFIPDV True H1975_Epitope_Rep2 1079.51752729727 1079.5169749679299 81.757 1 0.03938024624413653 0.0057509986043601715 0.035023519514073564 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 107926 12150 SVVTGGVQSV True PC9_epitope_Rep5 931.49746055903 931.49691496793 51.724 1 0.03935115830984524 0.0057509986043601715 0.03504420468996304 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 132898 13359 VVLVLAGR True PC9_epitope_Rep1 825.5436229058099 825.54252993586 56.245 2 0.03934772112999063 0.0057509986043601715 0.035046649660453316 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 74733 7510 NHANGLTL True PC9_epitope_Rep2 838.4297153523801 838.42860993586 34.255 2 0.03934670893980315 0.0057509986043601715 0.03504736969045027 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 21756 12192 ERTSFNYAM True PC9_epitope_Rep2 1117.4862442523297 1117.4851499358601 52.209 2 0.03932337097893563 0.0057509986043601715 0.035063974923430184 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 87333 8824 QPRYPVNSV True PC9_epitope_Rep1 1058.55089311422 1058.5497899358602 38.783 2 0.03931283147838341 0.0057509986043601715 0.03507147615035186 ['ENSG00000120438|ENST00000321394|TCP1'] 132211 17185 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 71.36 2 0.039300764843673064 0.0057509986043601715 0.03508006599519563 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 2755 8695 AETLAPVQA True H1975_Epitope_Rep2 898.47599683846 898.47488993586 38.406 2 0.03929217530011432 0.0057509986043601715 0.03508618172968086 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1', 'WWTR1|p.M267I|1|0.44|ENSG00000018408|chr3:149527940-149527940|C/A|missense_variant', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 6134 14788 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 61.882 2 0.039287442903438975 0.0057509986043601715 0.03508955158201608 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 133863 20493 VYGPLPQSF True PC9_epitope_Rep5 1006.5123823471798 1006.51187496793 83.866 1 0.03927572854541489 0.0057509986043601715 0.035097894374175896 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 89152 10248 QVRDVIIAA True PC9_epitope_Rep6 983.5763795860698 983.57528993586 50.083 2 0.03927300661552546 0.0057509986043601715 0.03509983313992144 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 9094 16186 AVIGDVIRV True PC9_epitope_Rep6 940.57056592964 940.56946993586 74.615 2 0.03926021945781565 0.0057509986043601715 0.03510894237727473 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 38452 7425 HENVSVIP True H1975_Epitope_Rep3 893.4606811274899 893.45958993586 33.538 2 0.03924774512657056 0.0057509986043601715 0.035117830751471124 ['ENST00000551440.1_1_12:100594629-100598862:+|nuORF', 'ENST00000550813.5_1_12:100594629-100599999:+|nuORF', 'nc|ENSG00000075089|Q9GZN1-2|ACTR6', 'ENSG00000075089|ENST00000188312|ACTR6'] 93069 12969 RPNDIMAEV True PC9_epitope_Rep2 1043.50697969691 1043.50647496793 55.177 1 0.03923554935640639 0.0057509986043601715 0.035126522538407416 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 58906 11670 LETEVPVVA True H1975_Epitope_Rep2 955.5226126777098 955.52150993586 49.961 2 0.039226560858354576 0.0057704791902094205 0.03513292973949742 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 2708 7039 AETAAVTVAA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 32.108 1 0.039222563373557555 0.0057704791902094205 0.035135779562803005 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 21598 13701 ERQRWVTAL True PC9_epitope_Rep5 1157.63054041725 1157.62888490379 57.728 3 0.039219476811315976 0.0057704791902094205 0.035137980123569515 ['ENSG00000110048|ENST00000263847|OSBP'] 105089 13972 SRDYAVVL True PC9_epitope_Rep5 921.4919812557699 921.49088993586 58.766 2 0.039218236130803004 0.0057704791902094205 0.03513886469907761 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 138459 9107 YHNPTANSF True PC9_epitope_Rep3 1049.45665837621 1049.45556993586 39.97 2 0.03920986100688316 0.0057704791902094205 0.035144836469863515 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 126712 16764 VLPGHFNTF True PC9_epitope_Rep3 1030.5236157372199 1030.5225099358602 69.628 2 0.039188847162677176 0.0057704791902094205 0.03515982400753392 ['ENSG00000176055|ENST00000316610|MBLAC2'] 92793 10519 RPALFSSSA True PC9_epitope_Rep5 934.4872302285 934.48612993586 45.448 2 0.03918771724649702 0.0057704791902094205 0.035160630046540936 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5', 'ENST00000489842.1_1_9:135931263-135933364:+|nuORF'] 48238 7132 IYQKAFEHL True NCI_RA007_Epitope_Rep3 1147.6025943339098 1147.60093490379 35.174 3 0.03916726833176953 0.0057704791902094205 0.03517522030471381 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 48289 12216 IYQRDPLKL True PC9_epitope_Rep5 1144.6604435631998 1144.65880490379 51.976 3 0.039166830515734954 0.0057704791902094205 0.03517553274324777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 11214 5300 DEDKEKTFEEK True NCI_RA007_Epitope_Rep1 1396.6358045066397 1396.63414490379 24.697 3 0.03916621108401535 0.0057704791902094205 0.035175974792264926 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 111169 9781 THGPPVQL True PC9_epitope_Rep3 847.45520182423 847.45410993586 42.576 2 0.039151124636845565 0.0057704791902094205 0.03518674252537284 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 73491 22301 MVDGTLLLL True PC9_epitope_Rep4 973.5518046310099 973.55125496793 94.019 1 0.03914982106199695 0.0057704791902094205 0.03518767306788625 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 96928 12435 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 52.856 2 0.03914672050353823 0.0057704791902094205 0.035189886453503065 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 73460 14750 MVAPAVASV True PC9_epitope_Rep4 843.4524249429099 843.45132993586 64.669 2 0.03914361023950235 0.0057704791902094205 0.03519210688954494 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 39967 10138 HPLLGVSA True PC9_epitope_Rep2 792.4493881678001 792.4488349679301 44.334 1 0.039112557259718295 0.0057704791902094205 0.03521428249455141 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 1244 6627 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.40686993586 30.443 2 0.039105919690173414 0.0057704791902094205 0.03521902410632235 ['ENSG00000162783|ENST00000367577|IER5'] 110307 7994 TESSWHEIAA True H1975_Epitope_Rep2 1129.50400249145 1129.50290993586 35.698 2 0.039105709935533764 0.0057704791902094205 0.03521917395564112 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 126710 15787 VLPGHFNTF True PC9_epitope_Rep2 1030.5236157372199 1030.5225099358602 65.989 2 0.03909808176515335 0.0057704791902094205 0.03522462392014778 ['ENSG00000176055|ENST00000316610|MBLAC2'] 121246 13208 VETFAFQA True H1975_Epitope_Rep2 911.4388830537499 911.43778993586 55.932 2 0.03908861938741696 0.0057704791902094205 0.03523138535991478 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 40587 5827 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 30.628 2 0.03907318343464625 0.0057704791902094205 0.03524241770728482 ['ENSG00000099812|ENST00000215582|MISP'] 133614 15222 VYADQPHIF True PC9_epitope_Rep2 1088.52909504048 1088.5279899358602 63.817 2 0.03907271286715475 0.0057704791902094205 0.03524275407744985 ['ENSG00000100439|ENST00000428304|ABHD4'] 76389 6661 NQDDLTHKL True PC9_epitope_Rep1 1082.5356369729002 1082.53452993586 30.426 2 0.03906424354481633 0.0057704791902094205 0.03524880858083855 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 109096 17721 TALLKIEGV True PC9_epitope_Rep3 942.57498260374 942.57388993586 73.361 2 0.03905823191565072 0.0057704791902094205 0.035253106691892945 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 98264 10305 SEVEVIHVP True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 46.269 2 0.03905649749743718 0.0057704791902094205 0.035254346827016156 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 4381 19612 AINDSFLSA True PC9_epitope_Rep3 936.45526139388 936.45416993586 80.674 2 0.039007183215349586 0.0057704791902094205 0.03528962319298915 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.G703D|1|0.38|ENSG00000022556|chr19:54985124-54985124|G/A|missense_variant'] 115579 6903 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 33.777 2 0.03900401154669912 0.0057704791902094205 0.03529189305965405 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 21302 9750 EREKWIHAL True PC9_epitope_Rep2 1180.63529144452 1180.6336349037902 42.842 3 0.038996540741269015 0.0057704791902094205 0.03529724019038493 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 5250 20751 ALPPVLTTV True PC9_epitope_Rep2 909.55351888317 909.55242993586 85.26 2 0.03898245904808698 0.0057704791902094205 0.03530732089654224 ['ENSG00000155506|ENST00000518297|LARP1'] 62131 4145 LLEGEESR True NCI_RA007_Epitope_Rep5 931.4610750503099 931.45996993586 22.446 2 0.03897267033858126 0.0057704791902094205 0.035314329848907214 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 90189 3498 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 18.304 2 0.03897201824103867 0.0057704791902094205 0.035314796809563495 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 86290 17561 QISDTSVVL True PC9_epitope_Rep2 960.51277627 960.51166993586 72.821 2 0.038970533465609476 0.0057704791902094205 0.035315860062761835 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 37539 13720 GVVGEVTQV True PC9_epitope_Rep4 886.47599683846 886.47488993586 60.664 2 0.038961686153596735 0.0057704791902094205 0.03532219623407196 ['ENSG00000059378|ENST00000263549|PARP12', 'PARP12|p.Q445Sfs*10|1|0.14|ENSG00000059378|chr7:140034323-140034324|-/A|frameshift_variant', 'PARP12|p.C457Lfs*48|1|0.1|ENSG00000059378|chr7:140034286-140034287|-/A|frameshift_variant'] 141586 7227 YTQKSLSLSPG True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61244993586 34.476 2 0.03895719727335637 0.0057704791902094205 0.035325411410071374 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1'] 36620 19671 GVIAGLNVL True PC9_epitope_Rep6 854.52255310806 854.52200496793 88.322 1 0.038944148463714696 0.005777159842746188 0.0353347591131896 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 26085 11336 FGPALSVK True PC9_epitope_Rep2 817.46978925921 817.46868993586 48.924 2 0.038941675450184 0.005777159842746188 0.03533653093503977 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 77341 11274 NSDVVEQIY True H1975_Epitope_Rep3 1065.49785448185 1065.49727496793 48.47 1 0.03893907108708455 0.005777159842746188 0.03533839694763845 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 46951 19078 ITPENLPQI True PC9_epitope_Rep4 1023.5600608155898 1023.5589699358601 81.474 2 0.03893360232851445 0.005777159842746188 0.03534231556410227 ['ENSG00000015479|ENST00000394805|MATR3'] 43569 4294 IGSGC[Carbamidomethyl]NLDSAR True H1975_Epitope_Rep3 1148.5244209456298 1148.5233299358601 21.632 2 0.0389306603476449 0.005777159842746188 0.03534442378501025 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 45412 9957 IQFNPPLSEK True NCI_RA007_Epitope_Rep4 1171.62372370131 1171.62262993586 45.143 2 0.03892411392073621 0.005777159842746188 0.03534911534195736 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 47129 20899 ITVGSLVTV True PC9_epitope_Rep1 887.5327834385901 887.53168993586 85.209 2 0.03891794647998082 0.005777159842746188 0.035353535791358116 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 36932 13438 GVLSDLTK True H1975_Epitope_Rep1 831.47018318203 831.46963496793 56.803 1 0.03890064007506841 0.005777159842746188 0.03536594255009737 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 57911 5662 LEGELEAR True PC9_epitope_Rep2 915.4661604307499 915.46506993586 27.166 2 0.03888741372159995 0.005777159842746188 0.035375426924871556 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000502356.3_1_1:112958760-112958892:+|nuORF'] 103133 6257 SPHPPSEVTA True PC9_epitope_Rep5 1020.48762415132 1020.48652993586 29.045 2 0.03888641386183853 0.005777159842746188 0.03537614399599296 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 136953 11381 YAGSGNVL True PC9_epitope_Rep3 779.38136817763 779.3808149679301 48.779 1 0.03887815712356757 0.005777159842746188 0.035382065979042775 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 72409 14298 MKLHYVAVL True PC9_epitope_Rep4 1072.61032256664 1072.6092299358602 62.898 2 0.038876211225838266 0.005777159842746188 0.03538346176164241 ['ENSG00000128791|ENST00000262120|TWSG1', 'nc|ENSG00000128791|Q9GZX9-2|TWSG1'] 67476 5602 LSSSSFSR True PC9_epitope_Rep3 869.42429561877 869.42318993586 26.625 2 0.03887546876452535 0.005777159842746188 0.03538399433802972 ['LAMP1|p.N181S|1|0.39|ENSG00000185896|chr13:113310847-113310847|A/G|missense_variant'] 21557 17041 ERNRYFISL True PC9_epitope_Rep5 1196.6302060640799 1196.62855490379 70.567 3 0.03886692710258399 0.005777159842746188 0.03539012187670713 ['ENSG00000163481|ENST00000295704|RNF25'] 107935 20355 SVVTSIFGV True PC9_epitope_Rep6 907.5014833103099 907.50038993586 90.994 2 0.038863323724593266 0.005777159842746188 0.03539270711200505 ['ENSG00000196305|ENST00000443024|IARS1'] 117656 13989 TVTNAVVTV True PC9_epitope_Rep5 902.50729696674 902.50618993586 58.83 2 0.03886324688233241 0.005777159842746188 0.03539276224410087 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 40569 4566 HRGTGIAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 24.06 2 0.03886177109317806 0.005777159842746188 0.03539382109457679 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 89254 15013 QVVGKLIEV True PC9_epitope_Rep2 983.6015317047498 983.60042993586 63.002 2 0.038842707188454104 0.005777159842746188 0.03540750156221419 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 41370 16253 HYAALAHYF True PC9_epitope_Rep5 1091.51886470995 1091.51776993586 67.507 2 0.03883872505345223 0.005777159842746188 0.03541035976757243 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF'] 108439 15785 SYLPLAHMF True NCI_RA007_Epitope_Rep4 1077.53173789277 1077.53064993586 68.557 2 0.038830086003684906 0.005777159842746188 0.035416561197173034 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 8106 14761 ATDYTFAMY True H1975_Epitope_Rep3 1081.44264810485 1081.4415499358602 62.156 2 0.03882974728031408 0.005777159842746188 0.035416804364614834 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 85267 4959 QEQLKSPPSP True H1975_Epitope_Rep3 1109.57168812845 1109.5705899358602 24.202 2 0.03879844093068159 0.005777159842746188 0.035439285281627375 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12'] 21763 10884 ERTSFNYAM True PC9_epitope_Rep6 1117.4862442523297 1117.4851499358601 52.728 2 0.038790919836324135 0.005777159842746188 0.03544468798933206 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 133909 7984 VYIDRVRSL True NCI_RA007_Epitope_Rep4 1119.64004247179 1119.6389499358602 37.47 2 0.03879003263815577 0.005777159842746188 0.03544532534712901 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 102653 22510 SLYANIDIL True PC9_epitope_Rep5 1020.5491617787198 1020.54806993586 91.588 2 0.03878810283102197 0.005777159842746188 0.03544671174337055 ['ENST00000510102.5_1_6:43481178-43483845:-|nuORF', 'ENST00000460903.2_1_6:43483331-43484545:-|nuORF', 'ENST00000502714.1_1_6:43481208-43483845:-|nuORF', 'ENSG00000137207|ENST00000372422|YIPF3'] 64634 12761 LPTKDLLSA True PC9_epitope_Rep4 956.5542471591599 956.55314993586 56.948 2 0.038777391383620644 0.005777159842746188 0.03545440783237078 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3', 'C2CD3|p.I477Nfs*12|1|0.16|ENSG00000168014|chr11:74118318-74118319|-/T|frameshift_variant', 'ENST00000415191.6_1_11:73824618-73881837:-|nuORF'] 108082 13807 SYANVQDGF True PC9_epitope_Rep6 999.4297749220299 999.42866993586 64.911 2 0.038774811079893834 0.005777159842746188 0.03545626197739272 ['ENSG00000152766|ENST00000371930|ANKRD22'] 142166 10275 YVTEKVLAA True PC9_epitope_Rep2 992.5542471591598 992.55314993586 44.854 2 0.03874936529805276 0.005777159842746188 0.035474551235656945 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000136872|ENST00000647789|ALDOB', 'ENSG00000109107|ENST00000226253|ALDOC'] 55305 8010 LAEAALELREE True H1975_Epitope_Rep3 1242.6455813446998 1242.64448993586 35.783 2 0.038746833540985834 0.005777159842746188 0.035476371395584634 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 108615 19883 SYPKIIEEF True PC9_epitope_Rep5 1124.57537652656 1124.57426993586 81.532 2 0.038745826465100636 0.005777159842746188 0.03547709543678059 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-4|FANCD2'] 45320 21514 IQAGLLSAL True PC9_epitope_Rep2 884.53311779176 884.53202993586 88.221 2 0.03873493439729657 0.005777159842746188 0.03548492715438317 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 48885 4618 KEAVTTIAA True NCI_RA007_Epitope_Rep3 902.5072969667399 902.50618993586 25.079 2 0.03873365636074453 0.005777159842746188 0.035485846199002316 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 87465 10208 QQDKQQLVL True PC9_epitope_Rep1 1098.6033226099 1098.6022299358601 44.144 2 0.03873221338145346 0.005777159842746188 0.03548688387996122 ['ENSG00000139618|ENST00000380152|BRCA2'] 48182 11467 IYPQVLHSL True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 52.225 2 0.038728946758435766 0.005777159842746188 0.035489233084413464 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 121205 12944 VESPVWVSA True H1975_Epitope_Rep2 972.4916469025999 972.49109496793 54.903 1 0.03870444884812148 0.005777159842746188 0.03550685516708253 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC', 'ENST00000557520.1_1_14:88425979-88431954:-|nuORF', 'nc|ENSG00000054983|P54803-5|GALC'] 39528 5527 HLGALLAR True NCI_RA007_Epitope_Rep3 849.51847078713 849.51736993586 28.738 2 0.0386958946602978 0.005777159842746188 0.03551301024592313 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 98103 13704 SESDYIVMP True H1975_Epitope_Rep1 1039.4532127885498 1039.4526749679299 57.85 1 0.03868637719067493 0.005777159842746188 0.035519859536307305 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|4|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1', 'NCOR2-SCARB1|11|fusion', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'SCARB1|p.G379*|1|0.3|ENSG00000073060|chr12:124795254-124795263|GGGGATTCCC/-|frameshift_variant'] 54429 13272 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64810993586 57.73 2 0.038674960852183485 0.005777159842746188 0.035528076873730864 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 41492 17112 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 70.647 2 0.038665320033538654 0.005777159842746188 0.035535017503340614 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 62952 8143 LLPGELAK True NCI_RA007_Epitope_Rep2 839.5116540711899 839.51054993586 36.309 2 0.03863917386522805 0.005777159842746188 0.035553846626836624 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 20182 9107 ENGSLYDY True H1975_Epitope_Rep3 959.38724140371 959.3866949679301 40.018 1 0.038636643182538816 0.005777159842746188 0.03555566955514891 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 48428 22832 IYVPVSLGF True PC9_epitope_Rep5 993.55351888317 993.55242993586 92.819 2 0.03861482066499454 0.005777159842746188 0.03557139236014579 ['ENSG00000172818|ENST00000335987|OVOL1'] 109956 6543 TEGYSPPAA True H1975_Epitope_Rep3 891.3974121645898 891.39686496793 30.135 1 0.03861038163364393 0.005777159842746188 0.03557459135815207 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 14027 15504 DRIKDEFQL True PC9_epitope_Rep1 1162.59823722946 1162.5965849037902 64.458 3 0.03859363500096047 0.005777159842746188 0.03558666211188777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 3998 18552 AHEGSIFAL True PC9_epitope_Rep3 943.4763311916299 943.4752299358599 76.579 2 0.03859274845359066 0.005777159842746188 0.03558730122299847 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 111810 23530 TILPAIILV True PC9_epitope_Rep2 951.63685458431 951.63574993586 95.983 2 0.03858535269522953 0.005777159842746188 0.03559263320717979 ['ENSG00000198712|ENST00000361739|MT-CO2'] 89456 17252 QYESKVFYL True PC9_epitope_Rep4 1175.5862755634298 1175.5851699358602 74.367 2 0.038578189420758344 0.005777159842746188 0.03559779824472962 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 77620 5243 NTEGLHHLY True H1975_Epitope_Rep2 1082.5145076055 1082.5134099358602 25.234 2 0.038574444093447395 0.005777159842746188 0.03560049905104334 ['nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B', 'nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C', 'ENSG00000224960|ENST00000412172|PPP4R3C'] 41529 20131 HYPPVQVLF True PC9_epitope_Rep3 1098.58621599378 1098.5851099358601 82.687 2 0.038562287073409446 0.005777159842746188 0.0356092668723054 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 62009 10517 LLDPTQKALY True H1975_Epitope_Rep1 1160.64412479272 1160.64302993586 45.406 2 0.03855817743909092 0.005777159842746188 0.03561223122598692 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A', 'ZNF75A|p.E158Sfs*50|1|0.1|ENSG00000162086|chr16:3317446-3317449|AAGA/-|frameshift_variant'] 103584 11700 SPSPPSVAV True PC9_epitope_Rep4 839.4388830537499 839.43778993586 52.766 2 0.0385570711933388 0.005777159842746188 0.035613029217782435 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 128464 8183 VPSGASTGIYE True H1975_Epitope_Rep1 1079.51350454599 1079.51297496793 36.417 1 0.03855545017042279 0.005777159842746188 0.0356141985728628 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 60514 18434 LHASDFSVL True PC9_epitope_Rep5 987.50254593947 987.50144993586 75.927 2 0.038550650256315835 0.005777159842746188 0.03561766127633756 ['ENSG00000130827|ENST00000369682|PLXNA3'] 99152 13582 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 57.266 2 0.03853127453897346 0.005777159842746188 0.03563164208166685 ['ENSG00000132646|ENST00000379143|PCNA'] 35920 5867 GTSEFLNK True NCI_RA007_Epitope_Rep2 894.4446967101799 894.44358993586 27.441 2 0.03851827597836865 0.005777159842746188 0.03564102404219969 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 7383 4732 ARSTDQTVL True PC9_epitope_Rep4 989.51417325233 989.51306993586 24.755 2 0.03851513401153077 0.005777159842746188 0.035643292139713574 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 121203 8442 VESPESLAA True H1975_Epitope_Rep3 901.4392769765699 901.43872496793 37.458 1 0.038513333348109816 0.005777159842746188 0.035644592044636214 ['ENSG00000052749|ENST00000370992|RRP12'] 119619 9683 VATVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 42.102 2 0.038507033281523086 0.005777159842746188 0.03564914040844394 ['CON__P00761'] 22761 9566 ETVKLVEQY True H1975_Epitope_Rep2 1107.58119018299 1107.58008993586 41.771 2 0.038506633197466805 0.005777159842746188 0.03564942926813833 ['CDKAL1|p.E383Q|1|0.28|ENSG00000145996|chr6:21065139-21065139|G/C|missense_variant'] 97730 10763 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 46.43 1 0.03850156680342202 0.005777159842746188 0.03565308736829544 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ZNF451|p.H887Qfs*4|1|0.08|ENSG00000112200|chr6:57150770-57150773|ATAT/-|frameshift_variant', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 77940 20248 NVLDHFSEL True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 82.712 2 0.03850037898738529 0.005777159842746188 0.03565394505712026 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 32913 16654 GHVVDIVAL True PC9_epitope_Rep4 921.52836676449 921.52726993586 72.024 2 0.03849922522348631 0.005777159842746188 0.03565477817503994 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 1150 7580 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 34.108 2 0.03848565067376157 0.005777159842746188 0.03566458145348491 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 112794 23831 TLIEDILGV True PC9_epitope_Rep2 971.5539128059899 971.5533649679301 97.137 1 0.03847480086121357 0.005777159842746188 0.03567241866599707 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 114160 7372 TPKMPGQSV True PC9_epitope_Rep5 943.47970231991 943.47860993586 33.313 2 0.038460516961392854 0.005777159842746188 0.0356827387296522 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 99837 20777 SILETVTAV True PC9_epitope_Rep5 931.52261267771 931.52150993586 84.971 2 0.03845853458002025 0.005777159842746188 0.035684171198014786 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 45641 16744 IRDPFIHEI True PC9_epitope_Rep1 1138.6134933707801 1138.6118549037901 69.234 3 0.03844810595545164 0.005777159842746188 0.035691707744104885 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 124951 8933 VHSPPNVGL True PC9_epitope_Rep4 918.49231560894 918.49120993586 41.903 2 0.03843937464355066 0.005777159842746188 0.0356980187436383 ['ENSG00000146247|ENST00000275034|PHIP'] 4123 10383 AHSPASLSF True PC9_epitope_Rep6 915.44503106335 915.44392993586 50.664 2 0.03843484615574895 0.005777159842746188 0.03570129232083568 ['ENSG00000102699|ENST00000381989|PARP4'] 139327 20827 YLLDLHSYL True PC9_epitope_Rep4 1135.59136094387 1135.59026993586 88.262 2 0.038434469908671026 0.005777159842746188 0.03570156431606584 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 9961 8510 AYNPNTQTF True NCI_RA007_Epitope_Rep3 1054.4719740871801 1054.47086993586 40.548 2 0.03843270965988879 0.005777159842746188 0.035702836852952696 ['ENSG00000174405|ENST00000442234|LIG4'] 11650 10183 DGNASGTTLLE True H1975_Epitope_Rep3 1076.49858275784 1076.49807496793 44.214 1 0.03841086993220671 0.005777159842746188 0.03571862873344513 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 129205 8621 VQTAIKSEL True PC9_epitope_Rep2 987.56006081559 987.55896993586 38.524 2 0.0384063219363744 0.005777159842746188 0.03572191806496633 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 49467 13226 KEYPDFNFV True NCI_RA007_Epitope_Rep4 1157.53932537101 1157.53822993586 58.0 2 0.03839957401139529 0.005777159842746188 0.03572679897779271 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 44986 13521 IPATPGIGA True PC9_epitope_Rep1 795.4490538146299 795.44850496793 56.865 1 0.038396667435599864 0.005777159842746188 0.03572890154261428 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 49019 11550 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52817496793 51.374 1 0.03839514955059477 0.005777159842746188 0.035729999596210184 ['ENSG00000197747|ENST00000368811|S100A10'] 132216 17389 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 72.057 2 0.03838762192968689 0.005777159842746188 0.0357354455883803 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 29355 16151 FVDGSAIQV True PC9_epitope_Rep6 934.47599683846 934.47488993586 74.475 2 0.03837660301130798 0.005777159842746188 0.03574341872468684 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 9492 10807 AVVPSTATV True PC9_epitope_Rep6 843.4701831820299 843.46908993586 52.413 2 0.038360604894883146 0.005777159842746188 0.0357549974945883 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 48000 17093 IYLDLPQNF True NCI_RA007_Epitope_Rep3 1121.57571087973 1121.57460993586 75.104 2 0.038344192990816574 0.005777159842746188 0.03576687913782002 ['RNF14|p.L342Vfs*10|1|0.21|ENSG00000013561|chr5:141980309-141980310|-/G|frameshift_variant', 'ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 77698 13502 NTISTGLLY True H1975_Epitope_Rep3 980.51786165044 980.51731496793 57.212 1 0.03834419245735345 0.005777159842746188 0.03576687952408445 ['ENSG00000139218|ENST00000369367|SCAF11', 'SCAF11|p.H691Tfs*8|1|0.05|ENSG00000139218|chr12:45927630-45927631|-/AAAAGGTTGAAACTGT|frameshift_variant', 'SCAF11|p.S759Lfs*23|1|0.07|ENSG00000139218|chr12:45927426-45927426|A/-|frameshift_variant', 'SCAF11|p.S36I|1|0.37|ENSG00000139218|chr12:45961812-45961812|C/A|missense_variant', 'ENST00000474828.1_1_12:46355467-46384201:-|nuORF', 'ENST00000547018.5_1_12:46345524-46385838:-|nuORF'] 38824 14098 HHANFPQYVM True PC9_epitope_Rep5 1242.5604122521001 1242.55930993586 59.239 2 0.03833154606870583 0.005777159842746188 0.03577603740948313 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 90526 8844 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64349490379 38.986 3 0.03831560332127833 0.005777159842746188 0.03578758526076637 ['ENSG00000127540|ENST00000591899|UQCR11'] 75080 15882 NHVISPLL True PC9_epitope_Rep5 891.5178020807899 891.51670993586 66.08 2 0.03830020272747544 0.005777159842746188 0.03579874349162426 ['ENSG00000155096|ENST00000337198|AZIN1'] 7931 4874 ATAPPGVLK True NCI_RA007_Epitope_Rep3 852.50690304392 852.50580993586 26.155 2 0.0382981102311938 0.005777159842746188 0.03580025980672888 ['ENSG00000105538|ENST00000222145|RASIP1'] 108480 21845 SYMFVDENTF True PC9_epitope_Rep1 1251.5117902938298 1251.51068993586 88.836 2 0.03828816955413214 0.005777159842746188 0.03580746402302216 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 121468 9766 VEYEVPEA True H1975_Epitope_Rep1 934.4283779396998 934.4278249679301 42.496 1 0.03826815635489555 0.005777159842746188 0.03582197183193408 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 29398 12552 FVDPSQDHAL True PC9_epitope_Rep1 1127.52473793603 1127.52364993586 53.15 2 0.03825678223573398 0.005777159842746188 0.03583021934629575 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 96636 9999 SAIGLADPP True H1975_Epitope_Rep2 839.4388830537499 839.43778993586 43.451 2 0.03825120081513298 0.005777159842746188 0.03583426710744417 ['ENSG00000186838|ENST00000335426|SELENOV'] 44182 8027 IIYDDLSK True H1975_Epitope_Rep1 965.5069626135701 965.50586993586 35.82 2 0.03823637621430803 0.005777159842746188 0.03584502014451709 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 101540 20011 SLLGGDVVSV True PC9_epitope_Rep4 944.51786165044 944.51676993586 85.106 2 0.038232895456066326 0.005777159842746188 0.03584754532234886 ['nc|ENSG00000157514|Q99576|TSC22D3'] 72973 18436 MQIQRVVI True PC9_epitope_Rep1 985.5742714110899 985.57316993586 75.704 2 0.03823035284178258 0.005777159842746188 0.035849390004792335 ['ENST00000392987.7_1_19:14817461-14817590:+|nuORF', 'ENST00000601134.5_1_19:14805840-14818739:+|nuORF', 'ENST00000597301.5_1_19:14804303-14827921:+|nuORF', 'nc|ENSG00000160961|Q96JL9-3|ZNF333', 'ENSG00000160961|ENST00000292530|ZNF333'] 87938 5033 QRLETQVSA True PC9_epitope_Rep4 1030.5407223533398 1030.5396299358601 25.989 2 0.03822304451388238 0.005777159842746188 0.03585469270177844 ['ENSG00000196878|ENST00000356082|LAMB3'] 31914 12256 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43606993586 52.225 2 0.0382218002919893 0.005777159842746188 0.035855595538708464 ['ENSG00000100726|ENST00000262319|TELO2'] 76333 18516 NPTLILAA True PC9_epitope_Rep4 811.4803539429099 811.47980496793 79.295 1 0.03821018685307803 0.005777159842746188 0.0358640234792157 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 119895 5773 VDITTPKAA True NCI_RA007_Epitope_Rep3 914.5072969667399 914.50618993586 29.689 2 0.03819927949390377 0.005777159842746188 0.03587194058250129 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000422292.2_1_9:15055292-15055805:+|nuORF'] 133 6149 AAAYPHTSL True NCI_RA007_Epitope_Rep3 929.46068112749 929.45958993586 31.181 2 0.03817521518554894 0.005777159842746188 0.03588941302960416 ['ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 46923 11178 ITNIPFDVK True NCI_RA007_Epitope_Rep2 1045.58079626017 1045.5796899358602 48.06 2 0.038168241832890304 0.005777159842746188 0.03589447757636037 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 76788 11783 NRAEYYHLL True PC9_epitope_Rep4 1177.58800689893 1177.5869099358601 53.09 2 0.03813907256685342 0.005777159842746188 0.03591566911860244 ['ENSG00000100393|ENST00000263253|EP300'] 36137 19507 GVAPGFQVV True PC9_epitope_Rep1 872.4756029156399 872.4745099358599 79.852 2 0.038134829300978806 0.005777159842746188 0.035918752767789636 ['ENSG00000165724|ENST00000298585|ZMYND19'] 55096 7106 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 32.73 2 0.038131111727206436 0.005777159842746188 0.035921454577324166 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 90036 6078 RDTQALLSA True NCI_RA007_Epitope_Rep5 973.51925863277 973.51816993586 30.061 2 0.03808264536039525 0.005777159842746188 0.03595669450134154 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF'] 11096 9313 DC[Carbamidomethyl]LTESNLIK True H1975_Epitope_Rep1 1191.58053883942 1191.57944993586 40.729 2 0.038068197288436675 0.005777159842746188 0.035967205517361905 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 1474 12234 AEEIANEMIEA True H1975_Epitope_Rep2 1218.5438186981 1218.54272993586 52.14 2 0.03806460577519386 0.005777159842746188 0.035969818768639285 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 5232 23153 ALPEIFTEL True PC9_epitope_Rep5 1031.55391280599 1031.55280993586 94.047 2 0.03805370914540595 0.005777159842746188 0.035977748367672445 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 16364 5493 EEILAQAK True PC9_epitope_Rep4 900.4916469026 900.49054993586 27.889 2 0.03803157342973787 0.005777159842746188 0.035993861454478006 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 135154 15784 WELLPSAAA True H1975_Epitope_Rep2 956.4967322830398 956.49562993586 65.894 2 0.038022876744533876 0.005777159842746188 0.036000193684212346 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'ENST00000487089.1_1_6:31603319-31603595:+|nuORF', 'ENST00000487839.1_1_6:31603188-31603595:+|nuORF'] 89135 12342 QVRDVIIAA True PC9_epitope_Rep1 983.5763795860698 983.57528993586 52.331 2 0.038005323466044086 0.005777159842746188 0.03601297752597204 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 49283 8433 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5911749679299 37.421 1 0.03800497564552842 0.005777159842746188 0.03601323087934112 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 105021 18515 SRDLSLLI True PC9_epitope_Rep4 915.5389314481899 915.53782993586 79.291 2 0.03799952738495506 0.005777159842746188 0.03601719960874489 ['ENSG00000242550|ENST00000238508|SERPINB10'] 17568 8474 EHGPNPIL True PC9_epitope_Rep4 875.45011644379 875.44900993586 40.064 2 0.03799023083256474 0.005777159842746188 0.03602397246460501 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 5420 13220 ALTGHLEEVVL True NCI_RA007_Epitope_Rep2 1179.6499384491499 1179.6488499358602 56.055 2 0.03797268982686311 0.005777159842746188 0.036036754701392046 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 54784 19522 KYNDTFWKEF True PC9_epitope_Rep3 1376.6401020414398 1376.63845490379 80.322 3 0.037946021428900654 0.005777159842746188 0.036056195677087434 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 139438 20251 YLPPGFLSA True PC9_epitope_Rep4 963.50656869075 963.50546993586 86.037 2 0.03794339612353555 0.005777159842746188 0.03605810998927782 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 87167 8751 QPFPAHIGRSA True PC9_epitope_Rep5 1179.61489035311 1179.61324490379 38.602 3 0.03794323601694691 0.005777159842746188 0.03605822673817165 ['nc|ENSG00000139436|Q14161-3|GIT2', 'ENSG00000139436|ENST00000355312|GIT2', 'nc|ENSG00000139436|Q14161-4|GIT2'] 65011 12636 LQIDNARLA True PC9_epitope_Rep3 1012.5665431783599 1012.56544993586 53.627 2 0.03793139330968485 0.005777159842746188 0.03606686328984431 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 140273 15577 YRAPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54346496793 65.191 1 0.03791926897748526 0.005777159842746188 0.03607570708509383 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 90775 6969 RESDVGVVV True H1975_Epitope_Rep2 958.5083595958998 958.50726993586 31.727 2 0.03791861683191365 0.005777159842746188 0.03607618283001451 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 126227 13849 VLGPDLKSV True PC9_epitope_Rep5 926.5436824754601 926.54258993586 58.29 2 0.037916296058892386 0.005777159842746188 0.03607787589498111 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 1264 12370 AEDILGVQAA True H1975_Epitope_Rep2 985.5080252427299 985.50692993586 52.667 2 0.03791239921427847 0.005777159842746188 0.03608071890095661 ['ENSG00000119227|ENST00000412723|PIGZ', 'PIGZ|p.L357Pfs*26|1|0.32|ENSG00000119227|chr3:196947820-196947827|GGCACCCA/-|frameshift_variant'] 109045 20240 TAISLFYEL True NCI_RA007_Epitope_Rep1 1055.5539128059902 1055.55337496793 82.933 1 0.0379095852223587 0.005777159842746188 0.03608277201531056 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 64597 11762 LPSRFIESA True PC9_epitope_Rep4 1018.5447451046199 1018.54364993586 53.009 2 0.037907100004530486 0.005777159842746188 0.036084585337499545 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 61182 20898 LILEKILQA True PC9_epitope_Rep1 1039.6641319613097 1039.66302993586 85.205 2 0.03789579635785776 0.005777159842746188 0.03609283396530826 ['ENSG00000129474|ENST00000262713|AJUBA'] 93422 14972 RQFGFIVL True NCI_RA007_Epitope_Rep3 978.5650866263799 978.56398993586 66.335 2 0.037874842828587454 0.005777159842746188 0.036108128751274754 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 115764 10861 TSDEDDLYY True H1975_Epitope_Rep2 1119.42441475807 1119.42330993586 46.807 2 0.037863863269037235 0.005777159842746188 0.03611614540226813 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 114312 11872 TPQPPLLKA True PC9_epitope_Rep5 963.5753169569099 963.57420993586 50.664 2 0.037862390075717 0.0057998801677651285 0.0361172211620626 ['ENSG00000155561|ENST00000285968|NUP205'] 34758 19615 GQFGVGFYSA True PC9_epitope_Rep4 1031.4712458111896 1031.47014993586 83.566 2 0.03785984090671742 0.0057998801677651285 0.036119082689930415 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 96109 10357 RYMPQNPHII True PC9_epitope_Rep4 1267.6495616096697 1267.64846993586 47.536 2 0.03784837438959556 0.0057998801677651285 0.036127457132501685 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 38871 8083 HHDSSTFTL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 36.449 2 0.03784332976387088 0.0057998801677651285 0.03613114195288445 ['ENSG00000106397|ENST00000223127|PLOD3'] 1015 6915 AEAEAGVAV True H1975_Epitope_Rep3 815.4024975450299 815.40194496793 31.558 1 0.037834064810341045 0.0057998801677651285 0.036137910340244765 ['ENSG00000178685|ENST00000313028|PARP10', 'ENST00000528580.1_1_8:145060208-145060527:-|nuORF'] 862 11127 [Acetylation]-ADFDTYDDR True H1975_Epitope_Rep1 1158.4465475012798 1158.44597496793 47.766 1 0.037826985815864925 0.0057998801677651285 0.036143082547024696 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF', 'nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H'] 28957 13142 FTDTSLMY True H1975_Epitope_Rep1 976.42118438428 976.42063496793 55.644 1 0.037796064507479035 0.0057998801677651285 0.03616568247822366 ['nc|ENSG00000177426|Q15583-4|TGIF1', 'ENSG00000177426|ENST00000343820|TGIF1', 'nc|ENSG00000177426|Q15583-3|TGIF1', 'nc|ENSG00000177426|Q15583|TGIF1'] 39932 8533 HPIDDLQSA True PC9_epitope_Rep1 994.47197408718 994.47086993586 37.659 2 0.03779351719099885 0.0057998801677651285 0.03616754482179843 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'ENSG00000213186|ENST00000309784|TRIM59'] 31572 10214 GEELAGAIAA True H1975_Epitope_Rep2 900.4552613938798 900.45471496793 44.293 1 0.037787561191691556 0.0057998801677651285 0.03617189957921947 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 120428 5003 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 24.329 2 0.03774280456535364 0.005822869740247292 0.036204638176760104 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 17689 20570 EHLTMLQVL True PC9_epitope_Rep3 1082.57941636118 1082.57830993586 84.388 2 0.03773140015296111 0.005822869740247292 0.0362129843957007 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 110354 7596 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 34.21 1 0.037718834947296276 0.005822869740247292 0.03622218206618602 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 93349 11010 RPWSPAVSA True PC9_epitope_Rep5 969.5032146458099 969.50210993586 47.339 2 0.03771445767582304 0.005822869740247292 0.03622538668454929 ['ENSG00000157933|ENST00000378536|SKI'] 52498 7676 KKWTSVIRL True NCI_RA007_Epitope_Rep5 1129.69716342509 1129.69552490379 36.228 3 0.03770702333538928 0.005822869740247292 0.03623082995995092 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 26886 15685 FLDGNELTL True NCI_RA007_Epitope_Rep3 1020.51277627 1020.51166993586 69.331 2 0.03769435965539357 0.005822869740247292 0.0362401036890656 ['ENSG00000213719|ENST00000375784|CLIC1'] 115326 18031 TRIGLAPVL True PC9_epitope_Rep5 938.5913013742198 938.59020993586 74.372 2 0.03768793080905022 0.005822869740247292 0.036244812381258214 ['ENST00000609154.1_1_20:5988006-5996237:+|nuORF', 'ENST00000489345.5_1_20:5990447-6004030:+|nuORF', 'nc|ENSG00000088766|Q9UJA2-2|CRLS1', 'ENSG00000088766|ENST00000378863|CRLS1'] 8289 15136 ATIIDILTK True NCI_RA007_Epitope_Rep2 986.60119735158 986.60010993586 63.564 2 0.037676563176678855 0.005842492158130402 0.03625313969850672 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 35713 5919 GTFGGLGSK True NCI_RA007_Epitope_Rep4 822.42356734278 822.42301496793 29.389 1 0.037670253991980394 0.005842492158130402 0.03625776218559108 ['ENSG00000124942|ENST00000378024|AHNAK'] 115061 6547 TRDEDHIAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 30.596 2 0.03765229025102051 0.005842492158130402 0.03627092630342097 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 142661 20203 YYPEYKLLF True PC9_epitope_Rep4 1234.62741209942 1234.62630993586 85.848 2 0.037650044013170285 0.005842492158130402 0.03627257267453767 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 98995 5651 SHDHGYTTL True PC9_epitope_Rep3 1029.45157299577 1029.4504699358602 26.813 2 0.037645495951824426 0.005842492158130402 0.03627590635679754 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 134766 11906 VYTTNIQEL True NCI_RA007_Epitope_Rep5 1079.54989005471 1079.5487899358602 52.453 2 0.037621771068131395 0.005842492158130402 0.03629330076771467 ['ENSG00000110031|ENST00000395074|LPXN', 'nc|ENSG00000110031|O60711-2|LPXN', 'ENST00000529915.1_1_11:58322280-58343350:-|nuORF'] 4192 9755 AHYSAVTSL True PC9_epitope_Rep2 947.47124581119 947.47014993586 42.861 2 0.037617140252981636 0.005842492158130402 0.0362966967946434 ['ENSG00000183751|ENST00000568546|TBL3'] 97083 7059 SDGFNGADLR True H1975_Epitope_Rep3 1050.47303671634 1050.47192993586 32.117 2 0.037589359989326915 0.005842492158130402 0.03631707535677408 ['ENSG00000100519|ENST00000445930|PSMC6'] 4673 16143 ALAPGLPTA True PC9_epitope_Rep4 809.46470387877 809.46360993586 70.033 2 0.03756716970767635 0.005842492158130402 0.036333360454312895 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 125826 18244 VLADALKSI True PC9_epitope_Rep1 928.5593325396001 928.55822993586 74.966 2 0.03756716653104242 0.005842492158130402 0.03633336278604828 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 78539 11872 NYPSAFHSV True PC9_epitope_Rep1 1020.46649478392 1020.46538993586 50.532 2 0.037558416250729386 0.005842492158130402 0.03633978622205298 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 96659 9093 SAIQSISHV True PC9_epitope_Rep4 940.4977949122 940.49668993586 42.563 2 0.03755210480497537 0.005842492158130402 0.03634441996205311 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 71022 15776 LYITEPKTI True PC9_epitope_Rep3 1076.61176203528 1076.6106699358602 65.84 2 0.037541732761966255 0.005842492158130402 0.0363520360274438 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 34845 18798 GQISEVVVV True PC9_epitope_Rep5 928.5229470308799 928.52239496793 77.319 1 0.037540959541980216 0.005842492158130402 0.036352603849001 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 33347 5560 GKSKTIVGL True NCI_RA007_Epitope_Rep4 901.5596668927699 901.55856993586 27.987 2 0.037520680957721035 0.005842492158130402 0.03636749837264357 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 116662 6929 TVAVGVIK True NCI_RA007_Epitope_Rep2 785.50108938749 785.49998993586 31.572 2 0.037518558818099144 0.005842492158130402 0.03636905738031163 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 98904 20566 SGYPGLLNGV True PC9_epitope_Rep5 975.5025459394699 975.50199496793 84.152 1 0.037517527563615975 0.005842492158130402 0.03636981500157665 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 57982 4764 LEHAISPSA True H1975_Epitope_Rep2 923.47124581119 923.47014993586 23.413 2 0.03749469648999321 0.005842492158130402 0.03638659158479932 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'ENST00000585274.1_1_17:79974599-79974746:+|nuORF', 'ENST00000578236.5_1_17:79966858-79974746:+|nuORF', 'ENST00000577733.5_1_17:79966858-79975195:+|nuORF', 'ENST00000578361.5_1_17:79969964-79975195:+|nuORF'] 90498 4135 RELEVQHPAA True H1975_Epitope_Rep2 1148.59382055536 1148.59272993586 20.999 2 0.03748591585609218 0.005842492158130402 0.03639304550252185 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 105848 10970 SSLPTQLFK True NCI_RA007_Epitope_Rep5 1019.5651461960299 1019.56404993586 48.834 2 0.03746708784149631 0.005842492158130402 0.03640688776899463 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 9113 22544 AVITGFFTV True PC9_epitope_Rep2 953.5222187548899 953.52167496793 92.208 1 0.03746345994368668 0.005842492158130402 0.03640955550727997 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 114580 17257 TQDGNIYQL True PC9_epitope_Rep5 1050.4981888350198 1050.49767496793 71.391 1 0.03745469116076294 0.005842492158130402 0.03641600424467739 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 117728 18450 TVVAVVAGV True PC9_epitope_Rep5 813.4960040070499 813.49490993586 75.989 2 0.03744352740442712 0.005842492158130402 0.03642421572783402 ['ENSG00000105281|ENST00000542575|SLC1A5'] 111815 23687 TILPAIILV True PC9_epitope_Rep5 951.63685458431 951.63574993586 96.09 2 0.0374203910064256 0.005842492158130402 0.0364412387858382 ['ENSG00000198712|ENST00000361739|MT-CO2'] 29160 20087 FTQDSNYLL True PC9_epitope_Rep3 1099.51858992643 1099.51807496793 82.517 1 0.03741476596246148 0.005842492158130402 0.0364453785655431 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 67856 20305 LTAPALALA True PC9_epitope_Rep5 839.5116540711899 839.51110496793 83.147 1 0.03741023051282633 0.005842492158130402 0.03644871675001137 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 108035 18321 SYADQMFLL True NCI_RA007_Epitope_Rep3 1086.50558271458 1086.5044899358602 80.226 2 0.03739822535598673 0.005842492158130402 0.03645755407402095 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 85793 4871 QHDPSAVAV True PC9_epitope_Rep4 922.4508447197799 922.44974993586 25.325 2 0.03739733771566165 0.005842492158130402 0.03645820756415177 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 47826 14218 IYGYVAEQF True NCI_RA007_Epitope_Rep5 1088.5178616504397 1088.51727496793 61.381 1 0.0373903935396655 0.005842492158130402 0.03646332029035307 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 62950 7953 LLPGELAK True NCI_RA007_Epitope_Rep1 839.5116540711899 839.51054993586 34.929 2 0.03737107607242505 0.005842492158130402 0.03647754626226428 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 111474 20696 THVDILNDFTL True PC9_epitope_Rep4 1286.65066672514 1286.6495699358602 87.768 2 0.0373622357349648 0.005842492158130402 0.036484058162795055 ['ENSG00000114491|ENST00000232607|UMPS', 'nc|ENSG00000114491|P11172-4|UMPS', 'nc|ENSG00000114491|P11172-2|UMPS', 'nc|ENSG00000114491|P11172-3|UMPS'] 90812 7953 RESVPDLAP True H1975_Epitope_Rep1 982.5083595958998 982.50726993586 35.539 2 0.037354528449122654 0.005863348091420366 0.0364897362668643 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9'] 104760 18750 SQVQQLISL True PC9_epitope_Rep6 1014.5709598524599 1014.56986993586 84.762 2 0.03732917144276311 0.005863348091420366 0.03650842266823706 ['ENSG00000021776|ENST00000156471|AQR', 'AQR|p.R163G|1|0.07|ENSG00000021776|chr15:34942065-34942065|G/C|missense_variant'] 74820 11988 NHDVQVIL True PC9_epitope_Rep4 936.50288029264 936.50178993586 53.904 2 0.03731903787241557 0.005863348091420366 0.03651589274744974 ['ENSG00000179151|ENST00000315127|EDC3'] 107152 15497 SVIEQGGIQTV True PC9_epitope_Rep2 1129.59790287629 1129.5968099358602 64.882 2 0.0373134025871179 0.005863348091420366 0.03652004743739488 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 17972 5844 EIDKEEHLY True H1975_Epitope_Rep3 1174.5506183307 1174.5489749037902 27.493 3 0.037300668188897206 0.005863348091420366 0.03652943755476043 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51640434-51640983:+|nuORF', 'ENST00000479281.5_1_X:51931784-51932886:+|nuORF', 'ENST00000470594.5_1_X:51805328-51809606:-|nuORF', 'nc|ENSG00000187243|Q96JG8-2|MAGED4', 'ENSG00000187243|ENST00000335504|MAGED4B', 'ENSG00000154545|ENST00000471932|MAGED4', 'nc|ENSG00000187243|Q96JG8-4|MAGED4'] 38542 9783 HESLFGSVA True H1975_Epitope_Rep3 945.45559574705 945.45448993586 42.654 2 0.03729454458442357 0.005863348091420366 0.036533953737030944 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 41501 17613 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 72.936 2 0.03729250176009118 0.005863348091420366 0.03653546043573986 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 5658 5981 APAEEPAAAAA True PC9_epitope_Rep2 967.4610750503098 967.45996993586 28.393 2 0.03728137162050736 0.005863348091420366 0.03654367049161067 ['ENSG00000277443|ENST00000612661|MARCKS'] 49881 16215 KIFSGVFVKV True PC9_epitope_Rep4 1122.68011637862 1122.67846490379 70.314 3 0.037276988822684536 0.005863348091420366 0.03654690386562977 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 134386 21223 VYPFPTFQPAF True PC9_epitope_Rep6 1312.6492101731599 1312.64810993586 94.482 2 0.03727559610834917 0.005863348091420366 0.03654793138145728 ['ENSG00000132017|ENST00000254337|DCAF15'] 1217 7955 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.46036993586 35.547 2 0.037248319133379795 0.005863348091420366 0.03656806082289811 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 41535 17907 HYPPVQVLF True PC9_epitope_Rep6 1098.58621599378 1098.5851099358601 81.503 2 0.03723653420439445 0.005863348091420366 0.036576760658386845 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 137221 18829 YAYPGVLLI True H1975_Epitope_Rep2 1007.5691689473099 1007.5685749679301 78.18 1 0.03723083308568817 0.005863348091420366 0.036580969965846796 ['ENSG00000100412|ENST00000216254|ACO2', 'ENST00000478010.1_1_22:41904038-41912046:+|nuORF'] 108000 17640 SWPEGHFATI True PC9_epitope_Rep4 1143.53490869691 1143.53380993586 75.874 2 0.037230732766257206 0.005863348091420366 0.03658104403846332 ['ENSG00000100591|ENST00000216479|AHSA1'] 107711 6884 SVSDGIHSV True PC9_epitope_Rep2 899.4348603024702 899.43376993586 31.88 2 0.037225033601712816 0.005863348091420366 0.03658525233054557 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 127792 11367 VPDVLVAD True H1975_Epitope_Rep1 826.4436340810199 826.4430849679301 48.701 1 0.037217379679550924 0.005863348091420366 0.03659090468639355 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF'] 80380 8684 PGHLQEGFG True PC9_epitope_Rep3 940.4402800360799 940.43918993586 38.352 2 0.037200540583471574 0.005863348091420366 0.03660334288134956 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 128253 17892 VPPAVTGITFL True H1975_Epitope_Rep3 1113.64339651673 1113.6422899358602 74.919 2 0.037190639836368874 0.005863348091420366 0.03661065777838619 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 63671 23303 LMSLIINTF True PC9_epitope_Rep1 1050.57835373202 1050.5772499358602 94.423 2 0.037188766277109944 0.005863348091420366 0.03661204214924215 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 103303 6120 SPLSAARAA True PC9_epitope_Rep1 842.46101548066 842.45990993586 28.355 2 0.037181784892941334 0.005863348091420366 0.036617201086132894 ['ENST00000381222.8_2_X:2408799-2418966:-|nuORF', 'ENST00000381223.9_1_X:2408799-2418966:-|nuORF', 'ENST00000430536.7_1_X:2256005-2418966:-|nuORF', 'ENSG00000169084|ENST00000334651|DHRSX'] 46696 9629 ITDVDNGYY True H1975_Epitope_Rep1 1058.4556553167 1058.45454993586 41.966 2 0.03716650923009676 0.005863348091420366 0.03662849133085666 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 21110 18454 ERADLIAYL True PC9_epitope_Rep6 1062.57095985246 1062.5698699358602 83.625 2 0.03715330016078155 0.005863348091420366 0.036638256590398655 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 111236 8473 THIVGTEV True PC9_epitope_Rep3 854.4497820906199 854.44868993586 37.553 2 0.037121796364118165 0.005885167464114833 0.03666155597352596 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24680 20797 FALPGLLHA True PC9_epitope_Rep5 937.5385375253701 937.53744993586 85.045 2 0.03711080745760086 0.005885167464114833 0.03666968610367526 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 111814 22818 TILPAIILV True PC9_epitope_Rep4 951.63685458431 951.6363049679301 95.991 1 0.03709725249743091 0.005885167464114833 0.036679716879785815 ['ENSG00000198712|ENST00000361739|MT-CO2'] 48080 5409 IYNEIAGK True NCI_RA007_Epitope_Rep4 906.4810822188999 906.47998993586 27.377 2 0.037090426137099085 0.005885167464114833 0.03668476934053488 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 98694 16643 SGFGGITML True H1975_Epitope_Rep2 881.43168949833 881.4311449679301 69.249 1 0.03707036890059198 0.005885167464114833 0.03669961799110663 ['nc|ENSG00000141219|Q9BSJ5-2|MTNAP1', 'nc|ENSG00000141219|Q9BSJ5-3|MTNAP1', 'ENSG00000141219|ENST00000535032|C17orf80'] 6319 4720 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 24.7 2 0.037059524049891844 0.005885167464114833 0.0367076487554012 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 29522 16435 FVHDLVLYL True H1975_Epitope_Rep1 1117.6171817688898 1117.6160899358601 68.578 2 0.03703752124990986 0.005885167464114833 0.0367239468204599 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 107768 19279 SVSTQLSLV True PC9_epitope_Rep5 932.51786165044 932.51731496793 79.201 1 0.037035063010715276 0.005885167464114833 0.03672576809391291 ['ENSG00000214194|ENST00000397764|SMIM30'] 11862 18633 DHIGALLAV True PC9_epitope_Rep4 907.51271670035 907.51160993586 79.75 2 0.03703308348064128 0.005885167464114833 0.03672723475571206 ['ENSG00000180104|ENST00000512944|EXOC3', 'ENST00000515601.6_1_5:465213-467010:+|nuORF'] 40583 6364 HRGTGLVL True PC9_epitope_Rep4 851.49773534255 851.49662993586 31.56 2 0.037028583864125594 0.005885167464114833 0.03673056877409893 ['ENSG00000099812|ENST00000215582|MISP'] 134065 8132 VYKGEEATF True PC9_epitope_Rep2 1042.4971262058598 1042.4960299358602 36.637 2 0.03702055496206701 0.005885167464114833 0.03673651849014379 ['ENSG00000075420|ENST00000415807|FNDC3B'] 117886 10546 TWFNQPARKI True PC9_epitope_Rep6 1259.6774906096698 1259.67583490379 51.363 3 0.03701773034253796 0.005885167464114833 0.03673861183732887 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 129365 13806 VRDGATLIL True PC9_epitope_Rep4 956.5654805492 956.56438993586 61.0 2 0.037004415335235664 0.005885167464114833 0.03674848108432912 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 134455 11398 VYPPPHQVF True PC9_epitope_Rep4 1082.5549158654999 1082.55380993586 51.613 2 0.03698925498740148 0.005885167464114833 0.03675972091910735 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 114124 23274 TPGTLLLFL True PC9_epitope_Rep2 973.58481901145 973.58372993586 95.008 2 0.0369631621013686 0.005885167464114833 0.036779073083736805 ['ADAMTSL1|p.C1678Vfs*28|1|0.41|ENSG00000178031|chr9:18906759-18906760|-/T|frameshift_variant', 'ADAMTSL1|p.N1700Tfs*41|1|0.33|ENSG00000178031|chr9:18906826-18906826|C/-|frameshift_variant', 'ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-2|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-1|ADAMTSL1'] 21151 10718 ERATAISL True PC9_epitope_Rep3 859.4763311916299 859.4752299358599 46.181 2 0.03695588241631789 0.005907677589093518 0.03678447374263623 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant', 'ENST00000598459.5_1_19:39949480-39950711:+|nuORF'] 58168 15902 LEKSFYQF True PC9_epitope_Rep4 1060.5229470308798 1060.52184993586 69.096 2 0.036953182882555176 0.005907677589093518 0.036786476649773484 ['ENSG00000039123|ENST00000230640|MTREX'] 124959 10727 VHSTNVLL True PC9_epitope_Rep3 881.49706663621 881.49596993586 46.216 2 0.036952062737009975 0.005907677589093518 0.0367873077645625 ['BACH1|p.P308Lfs*8|1|0.22|ENSG00000156273|chr21:29326746-29326746|C/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 76786 12426 NRAEYYHLL True PC9_epitope_Rep2 1177.58800689893 1177.5869099358601 53.104 2 0.036950566321145226 0.005907677589093518 0.036788418086174744 ['ENSG00000100393|ENST00000263253|EP300'] 6316 4422 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 23.462 2 0.03694189191330355 0.005907677589093518 0.03679485495925064 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 132052 20275 VTTDVSYLL True PC9_epitope_Rep4 1009.53317736141 1009.53208993586 86.13 2 0.03693282390678507 0.005907677589093518 0.03680158494736588 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 135201 7142 WESPAQNTA True H1975_Epitope_Rep2 1002.4406739589 1002.43956993586 32.405 2 0.036931116526606404 0.005907677589093518 0.036802852230396754 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'ENST00000536649.5_1_19:14208073-14223129:-|nuORF'] 17308 13441 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50708496793 63.39 1 0.03691526879038977 0.005907677589093518 0.03681461683317856 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 36143 19436 GVAPGFQVV True PC9_epitope_Rep5 872.4756029156399 872.4745099358599 79.811 2 0.03690826559634133 0.005907677589093518 0.036819816708665354 ['ENSG00000165724|ENST00000298585|ZMYND19'] 135208 9169 WETVTTAA True H1975_Epitope_Rep2 877.4181476091699 877.4175949679301 40.222 1 0.03690652826781325 0.005907677589093518 0.036821106774625356 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 140440 16169 YRGQFPEL True PC9_epitope_Rep3 1008.5028802926398 1008.50178993586 67.335 2 0.03689587697895852 0.005929751572101475 0.036829016823307165 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 70165 22322 LVPSDFLSV True PC9_epitope_Rep2 975.52769805815 975.52660993586 91.344 2 0.036892208599730685 0.005929751572101475 0.03683174144102208 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 135128 6847 WEEPSSGNGTA True H1975_Epitope_Rep3 1133.46253160229 1133.46142993586 31.294 2 0.0368901778947768 0.005929751572101475 0.036833249782978354 ['ENSG00000179051|ENST00000375436|RCC2'] 26280 11830 FHGAPLTV True PC9_epitope_Rep2 840.4493881678001 840.44828993586 50.835 2 0.03686737910749808 0.005929751572101475 0.03685018766008612 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 49138 6650 KELAETIAA True H1975_Epitope_Rep2 944.5178616504398 944.51676993586 30.487 2 0.036864089187817424 0.005929751572101475 0.036852632393695677 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 89136 11374 QVRDVIIAA True PC9_epitope_Rep2 983.5763795860698 983.57528993586 49.071 2 0.036858444526710624 0.005929751572101475 0.03685682725909475 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 34807 11021 GQIAGSTGL True PC9_epitope_Rep1 802.41848196234 802.41793496793 47.28 1 0.03683262169718534 0.005929751572101475 0.03687602293503781 ['ENSG00000102243|ENST00000370634|VGLL1'] 99310 6987 SHSELIHNL True PC9_epitope_Rep6 1048.5301576696402 1048.5290699358602 35.85 2 0.03683167413564137 0.005929751572101475 0.03687672747980556 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 37979 14651 HAGVISVL True PC9_epitope_Rep5 794.46503823194 794.46394993586 61.358 2 0.03676826306551779 0.005929751572101475 0.03692390232280861 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 12079 18103 DHTVGFIL True PC9_epitope_Rep6 900.4705175351999 900.46942993586 82.269 2 0.036767537287191676 0.005929751572101475 0.03692444257019702 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 6420 5937 APRQPGLMA True PC9_epitope_Rep6 939.4960210903898 939.49492993586 31.128 2 0.03676391118321136 0.005929751572101475 0.03692714183469868 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 114787 22380 TQLGAFYIV True PC9_epitope_Rep1 1010.5436824754598 1010.5431749679301 90.9 1 0.03676208072759275 0.005929751572101475 0.036928504487117576 ['ENSG00000143753|ENST00000323699|DEGS1'] 124486 7480 VGVNGFGR True PC9_epitope_Rep2 804.4242360491198 804.42312993586 34.144 2 0.03676050978360442 0.005929751572101475 0.03692967398513829 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 67858 18310 LTAPALALA True PC9_epitope_Rep6 839.5116540711899 839.51110496793 83.072 1 0.036728155909433555 0.005966302324471385 0.03695376714521057 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 92788 17825 RPAGALVALVV True PC9_epitope_Rep6 1064.67061432408 1064.66950993586 81.195 2 0.036724118196919855 0.005966302324471385 0.03695677488933448 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 105430 9858 SRTGEMTVL True PC9_epitope_Rep2 992.49608066004 992.49498993586 43.253 2 0.03671800273146184 0.005966302324471385 0.036961330782344384 ['ENSG00000168495|ENST00000306433|POLR3D'] 42960 10804 IESPPAFTA True H1975_Epitope_Rep1 931.46509780159 931.46400993586 46.521 2 0.03671109115660764 0.005966302324471385 0.03696648034585182 ['ENSG00000152382|ENST00000367874|TADA1'] 39515 9718 HLETVILG True H1975_Epitope_Rep1 880.5018176634799 880.50072993586 42.309 2 0.03669995581264139 0.005966302324471385 0.036974778193896926 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 107764 19360 SVSTQLSLV True PC9_epitope_Rep1 932.51786165044 932.51676993586 79.275 2 0.036698264184193384 0.005966302324471385 0.03697603890466142 ['ENSG00000214194|ENST00000397764|SMIM30'] 6281 4904 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 23.728 2 0.03668298688287043 0.005966302324471385 0.03698742622324816 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 99699 16924 [Acetylation]-SIHFSSPVF True H1975_Epitope_Rep1 1061.51819631991 1061.51767496793 70.51 1 0.036681269437743046 0.005966302324471385 0.03698870655387897 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 77269 11032 NSATGVPTV True PC9_epitope_Rep5 844.42904664604 844.4284949679301 47.424 1 0.03668110555770037 0.005966302324471385 0.03698882872609944 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 48026 12954 IYLPEVRKI True PC9_epitope_Rep6 1129.68593003505 1129.68427490379 61.379 3 0.036679051318676895 0.005966302324471385 0.03699036018654457 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 76137 10849 NMVAKVDEV True PC9_epitope_Rep3 1003.5008316873099 1003.49972993586 46.705 2 0.03667456970030781 0.005966302324471385 0.03699370147878458 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 1731 5828 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 27.438 2 0.03665194718802538 0.005966302324471385 0.03701057179364756 ['ENSG00000161847|ENST00000617231|RAVER1'] 134618 13401 VYSNSIYEL True NCI_RA007_Epitope_Rep4 1086.5233409537 1086.52277496793 58.724 1 0.03663684260551744 0.005966302324471385 0.03702183946333928 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 68033 4439 LTDKDTGVTRY True H1975_Epitope_Rep3 1267.6408303174298 1267.63918490379 22.197 3 0.03663455900021851 0.005966302324471385 0.03702354323871883 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 36816 21342 GVLENIFGV True PC9_epitope_Rep6 946.5123823471798 946.51128993586 94.963 2 0.03662855419795746 0.005966302324471385 0.03702802368655694 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 31603 6145 GEEQPPQPP True H1975_Epitope_Rep3 977.4454249861699 977.44432993586 28.647 2 0.03662111197784102 0.005966302324471385 0.03703357730703836 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 67625 21243 LSVPGLVSV True PC9_epitope_Rep2 869.52221875489 869.52112993586 87.17 2 0.036619229814146295 0.005966302324471385 0.037034981951537295 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 95497 5267 RWPKKSAEF True NCI_RA007_Epitope_Rep4 1147.61382772395 1147.61218490379 26.807 3 0.03661706694725217 0.005966302324471385 0.03703659613969243 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 8576 16930 ATVPGLLKV True PC9_epitope_Rep5 896.5695033004799 896.56840993586 70.137 2 0.0366125131645508 0.005966302324471385 0.03703999491241789 ['ENSG00000179820|ENST00000391770|MYADM'] 58851 14010 LESTPSPVVF True H1975_Epitope_Rep2 1074.55972646242 1074.55917496793 59.038 1 0.036586315725493646 0.005966302324471385 0.03705955294722968 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 35164 16769 GQWYGPNTV True PC9_epitope_Rep2 1020.4664947839199 1020.46538993586 69.75 2 0.03657879764259408 0.005966302324471385 0.03706516732020242 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 118055 23015 TYFSTPLLL True PC9_epitope_Rep3 1053.57464825057 1053.57354993586 93.793 2 0.03657878033230822 0.005966302324471385 0.03706518024807152 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 92773 12406 RPADVIFAT True PC9_epitope_Rep6 988.5341804209199 988.53308993586 59.146 2 0.036578064897871035 0.005966302324471385 0.03706571456055849 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 58057 7504 LEIKPPPSA True H1975_Epitope_Rep3 950.54368247546 950.54258993586 33.845 2 0.036575881115553356 0.005966302324471385 0.03706734552996568 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P1059Rfs*35|1|0.35|ENSG00000080603|chr16:30720897-30720897|C/-|frameshift_variant', 'SRCAP|p.Q1189Sfs*2|1|0.18|ENSG00000080603|chr16:30722142-30722142|G/-|frameshift_variant', 'SRCAP|p.A1596Sfs*250|1|0.25|ENSG00000080603|chr16:30724210-30724214|GCAAT/-|frameshift_variant'] 1753 10674 AEGRIIWPA True H1975_Epitope_Rep2 1011.5501648382299 1011.54906993586 46.081 2 0.03656404988070959 0.005966302324471385 0.037076182831118666 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 21806 7524 ERYKEVAEL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 36.307 2 0.03654329958891527 0.005966302324471385 0.037091686598689895 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 35533 12492 GSSGGVIYL True H1975_Epitope_Rep2 851.43888305375 851.43833496793 53.141 1 0.03653014062933723 0.005966302324471385 0.037101521342969304 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 521 20425 AAPHFLPVL True PC9_epitope_Rep2 963.5541875895099 963.55308993586 83.992 2 0.03652587271239616 0.005966302324471385 0.0371047115840418 ['ENSG00000185504|ENST00000327787|FAAP100', 'nc|ENSG00000185504|Q0VG06-3|FAAP100'] 38349 9021 HEIESLYTKL True NCI_RA007_Epitope_Rep3 1231.6448530687098 1231.6437499358601 42.579 2 0.03652299559535094 0.005966302324471385 0.03710686234498977 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 105531 3553 SSAPPLTGK True NCI_RA007_Epitope_Rep4 856.46543215476 856.46432993586 19.682 2 0.0365114604028077 0.005966302324471385 0.03711548645049432 ['nc|ENSG00000100105|Q9HBE1-4|PATZ1', 'nc|ENSG00000100105|Q9HBE1-2|PATZ1', 'nc|ENSG00000100105|Q9HBE1-3|PATZ1', 'ENSG00000100105|ENST00000266269|PATZ1'] 19649 13044 ELRARQLEL True PC9_epitope_Rep2 1126.64585612822 1126.64422490379 55.453 3 0.03649245627103728 0.005966302324471385 0.03712969837644526 ['RCCD1-BLM|2|fusion', 'RCCD1-BLM|1|fusion', 'ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 35189 9680 GRADGYVL True PC9_epitope_Rep2 849.43446637965 849.43336993586 42.574 2 0.03648485799941155 0.005966302324471385 0.037135381936906575 ['ENSG00000142937|ENST00000396651|RPS8'] 85819 13660 QHEEFVTSL True PC9_epitope_Rep2 1088.51383889916 1088.51274993586 57.835 2 0.03648331803005859 0.005966302324471385 0.03713653393659228 ['ENSG00000085872|ENST00000546361|CHERP'] 115019 8371 TRATEGMVV True PC9_epitope_Rep1 962.4855159763398 962.48440993586 37.035 2 0.036483227518804694 0.005966302324471385 0.037136601646003894 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 49539 8708 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 43.352 2 0.03648132775303909 0.005966302324471385 0.03713802284225807 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 124913 12378 VHQLSVTL True PC9_epitope_Rep4 895.51271670035 895.51160993586 55.419 2 0.03647335336012061 0.005966302324471385 0.037143988921634584 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'DNAJA4|p.N132Mfs*2|1|0.34|ENSG00000140403|chr15:78273172-78273172|A/-|frameshift_variant', 'DNAJA4|p.L281Ifs*14|1|0.1|ENSG00000140403|chr15:78275689-78275690|-/C|frameshift_variant', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000485075.1_1_15:78562865-78566840:+|nuORF', 'ENST00000399417.3_1_X:106595227-106595875:-|nuORF', 'nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1'] 71870 4304 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 21.667 2 0.03646192914881194 0.005966302324471385 0.03715253744485586 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 64357 23191 LPLLIAPALAA True PC9_epitope_Rep1 1061.68486740589 1061.68376993586 93.999 2 0.03645120621007855 0.005966302324471385 0.0371605627687609 ['ENSG00000168140|ENST00000304735|VASN'] 24251 14991 EYSRFVNQI True PC9_epitope_Rep3 1154.5720224816198 1154.57092993586 62.79 2 0.036450231151391184 0.005966302324471385 0.03716129260227439 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF'] 14962 8796 DYFEQYGK True NCI_RA007_Epitope_Rep4 1048.4501760134401 1048.44906993586 40.646 2 0.03643538279017694 0.005966302324471385 0.03717240816601151 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF', 'HNRNPA1|p.L121I|1|0.5|ENSG00000135486|chr12:54282171-54282171|C/A|missense_variant'] 35679 15418 GTELGNELFY True H1975_Epitope_Rep1 1141.5291546101298 1141.52857496793 64.575 1 0.03643188807044626 0.005966302324471385 0.03717502475061457 ['ENSG00000126821|ENST00000247225|SGPP1'] 107397 19310 SVLNELPSA True PC9_epitope_Rep1 928.48656152216 928.48546993586 79.081 2 0.036423144072099574 0.005966302324471385 0.03718157230086263 ['nc|ENSG00000167608|Q7Z404|TMC4', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 39526 6109 HLGALLAR True H1975_Epitope_Rep2 849.51847078713 849.51736993586 28.476 2 0.036412200207329486 0.005966302324471385 0.03718976852900808 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 76228 14605 NPAAGSVILL True H1975_Epitope_Rep1 953.55458151233 953.5540349679301 61.386 1 0.03639450767464591 0.005966302324471385 0.03720302236986761 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 103546 21879 SPSAAWLLGAA True PC9_epitope_Rep5 1042.5447451046198 1042.54364993586 89.195 2 0.03635460571963094 0.005966302324471385 0.03723292875797903 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 76841 19438 NRDDIGIIL True PC9_epitope_Rep1 1027.56620882519 1027.5651099358602 79.582 2 0.03634584418970661 0.005966302324471385 0.037239498282482235 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 109477 14796 TDLLLEPYNK True PC9_epitope_Rep6 1204.6339540318397 1204.6328499358601 68.883 2 0.03633815015180433 0.005966302324471385 0.03724526821312353 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 39078 9250 HHSTPLIV True PC9_epitope_Rep3 902.4974009893799 902.49630993586 40.522 2 0.036337052502109175 0.005966302324471385 0.037246091428183664 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 90192 3725 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 19.324 2 0.0363338173577197 0.005966302324471385 0.03724851781262781 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 122391 7628 VGDPHTVTV True PC9_epitope_Rep1 923.47124581119 923.47014993586 34.162 2 0.03633154914994076 0.005966302324471385 0.037250219068386534 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 7008 18583 AQLSEGSITL True PC9_epitope_Rep1 1017.53423999057 1017.53314993586 76.267 2 0.03632426332221305 0.005966302324471385 0.03725568421515305 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF'] 126767 16544 VLPGVDALSNI True H1975_Epitope_Rep3 1096.61282466444 1096.61227496793 69.132 1 0.036313317153983365 0.005966302324471385 0.03726389631173337 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 142526 16146 YYITGNLETF True NCI_RA007_Epitope_Rep5 1219.57610480255 1219.5750099358602 68.84 2 0.036296275221411024 0.005966302324471385 0.03727668472572017 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 121565 16988 VFDVALLD True H1975_Epitope_Rep1 890.4749342092998 890.4743849679301 70.767 1 0.0362846381566793 0.005966302324471385 0.03728541946232971 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000489038.5_1_7:33016023-33032371:+|nuORF', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 114805 16674 TQLGPPYHIL True PC9_epitope_Rep6 1137.61824439805 1137.6171499358602 76.607 2 0.03626866886174108 0.005966302324471385 0.037297408837748916 ['ENSG00000119616|ENST00000341162|FCF1'] 61354 16171 LISQIVSSITA True H1975_Epitope_Rep3 1130.6546894764201 1130.65358993586 67.659 2 0.03626522271261763 0.005966302324471385 0.03729999656405034 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 78570 6963 NYQNVVHKL True PC9_epitope_Rep4 1113.59309227937 1113.59198993586 34.021 2 0.03625549808087878 0.005966302324471385 0.037307299664370595 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ZMYM4|p.A664Ffs*28|1|0.06|ENSG00000146463|chr1:35387155-35387156|-/TTTCCTAGACAATATTGTTTAGT|frameshift_variant'] 46699 9762 ITDVDNGYY True H1975_Epitope_Rep3 1058.4556553167 1058.45454993586 42.572 2 0.0362538158313763 0.005966302324471385 0.03730856314231298 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 8277 22602 ATIFDLSEV True PC9_epitope_Rep1 993.5018772331299 993.50078993586 91.748 2 0.0362521641016424 0.005966302324471385 0.037309803733968014 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 4091 7934 AHQQSIPAV True PC9_epitope_Rep3 949.4981292653698 949.49702993586 35.498 2 0.03625085305815833 0.005966302324471385 0.037310788466245234 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 3892 10156 AHAVGNVEL True PC9_epitope_Rep3 908.4715801643599 908.47048993586 44.018 2 0.0362486083793159 0.005966302324471385 0.037312474509613516 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU'] 54717 15639 KYMDINFDF True NCI_RA007_Epitope_Rep5 1191.52704643515 1191.5259499358601 66.863 2 0.036237540410608164 0.005966302324471385 0.03732078894594516 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 128088 21721 VPLEFPVVA True PC9_epitope_Rep2 969.5535188831699 969.55242993586 89.028 2 0.03622967112796688 0.005966302324471385 0.03732670145295238 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 75115 12697 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56087496793 53.844 1 0.036221854553116835 0.005966302324471385 0.03733257516089506 ['ENSG00000171223|ENST00000302754|JUNB'] 2101 9686 AELGEAPVP True NCI_RA007_Epitope_Rep3 881.4494477374499 881.44834993586 45.176 2 0.036219336956361356 0.005966302324471385 0.037334467160824954 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1'] 67623 21463 LSVPGLVSV True PC9_epitope_Rep1 869.52221875489 869.52112993586 87.398 2 0.03621197201479121 0.005966302324471385 0.03734000246678153 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 103385 9454 SPPIPLAK True PC9_epitope_Rep1 821.50108938749 821.49998993586 41.221 2 0.036202255586561476 0.005966302324471385 0.037347306177742116 ['ENSG00000155660|ENST00000652332|PDIA4'] 75005 8613 NHSADFETV True PC9_epitope_Rep1 1018.43558857846 1018.43448993586 37.966 2 0.03618807173883387 0.005966302324471385 0.03735797020834259 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 125973 14389 VLDNGILSY True H1975_Epitope_Rep2 992.51786165044 992.51676993586 60.498 2 0.03618522060801424 0.005966302324471385 0.037360114129891084 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3'] 24836 14977 FAVPENSSV True PC9_epitope_Rep5 948.4552613938799 948.45416993586 62.613 2 0.03618376882806839 0.005966302324471385 0.03736120584371586 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 76791 12885 NRAINIAL True PC9_epitope_Rep4 883.5239500903899 883.52284993586 57.438 2 0.0361659767920185 0.005966302324471385 0.0373745873942999 ['ENSG00000172336|ENST00000303151|POP7'] 79752 18575 PEALFQPSFL True H1975_Epitope_Rep1 1147.59136094387 1147.59026993586 77.446 2 0.036161986693867075 0.005966302324471385 0.037377588952263195 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 35230 14999 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.5860049679301 62.949 1 0.03616112157954246 0.005966302324471385 0.03737823976346191 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 15251 12440 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 52.888 2 0.03614739266695452 0.005966302324471385 0.037388569109742184 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 90798 6177 RESLPSTVSA True H1975_Epitope_Rep3 1045.54038800017 1045.53928993586 28.77 2 0.036138771037638774 0.005966302324471385 0.037395057105386466 ['ENSG00000114331|ENST00000326793|ACAP2'] 32485 17250 GGDDSFNTF True PC9_epitope_Rep5 958.3668403123 958.36574993586 71.366 2 0.036124417667374724 0.005966302324471385 0.037405860542643915 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 35779 15467 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 64.646 2 0.03612103204436224 0.005966302324471385 0.03740840921334134 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 96072 20270 RYLTVAAVF True PC9_epitope_Rep1 1038.5862159937797 1038.5851099358601 82.796 2 0.03612081775916958 0.005966302324471385 0.03740857053062435 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 27938 21642 FQEGDIILV True PC9_epitope_Rep2 1032.5491617787197 1032.5485749679299 88.72 1 0.03611996967503278 0.005966302324471385 0.03740920898768334 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 71173 16785 LYMRIRDNW True PC9_epitope_Rep5 1265.6339115455298 1265.63227490379 69.569 3 0.03610923955603658 0.005983170842173011 0.03741728767987501 ['ENSG00000172296|ENST00000399002|SPTLC3', 'ENSG00000100596|ENST00000216484|SPTLC2', 'ENST00000557566.1_1_14:78045296-78063654:-|nuORF'] 45093 16970 IPLDPVAG True PC9_epitope_Rep5 780.4381547777599 780.43760496793 70.294 1 0.03610872509693085 0.005983170842173011 0.03741767505335752 ['CON__P12763'] 18245 16288 EIPLTLHSV True PC9_epitope_Rep4 1007.56514619603 1007.56404993586 70.608 2 0.03608754417946193 0.005983170842173011 0.03743362671058359 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 40412 5996 HQVPAVSSV True PC9_epitope_Rep6 922.4872302285 922.48612993586 31.384 2 0.036084483918590794 0.005983170842173011 0.03743593192387936 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 729 10198 AAVGTTVSL True H1975_Epitope_Rep2 817.45453311789 817.4539849679301 44.231 1 0.03607783706666741 0.005983170842173011 0.03744093924403295 ['ENST00000274457.4_1_5:114880280-114880403:-|nuORF'] 111040 21561 THDELIQLVL True PC9_epitope_Rep3 1179.6499384491499 1179.6488499358602 88.23 2 0.03606779480531506 0.005983170842173011 0.03744850555093134 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'ENST00000522774.1_1_8:37720415-37728147:-|nuORF', 'nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1'] 128234 18952 VPNPYIISA True PC9_epitope_Rep2 972.5280324113199 972.52692993586 78.263 2 0.036057934933187624 0.005983170842173011 0.03745593572404461 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 72000 5350 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 25.65 2 0.03605257859266942 0.005983170842173011 0.037459972673691805 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 88947 11931 QVHGTITGVDV True PC9_epitope_Rep1 1124.5825871653199 1124.5814899358602 50.757 2 0.0360339158869545 0.005983170842173011 0.03747404126229117 ['ENSG00000167088|ENST00000300413|SNRPD1'] 26033 6809 FGHGAEDSL True NCI_RA007_Epitope_Rep1 931.40356017419 931.40246993586 30.493 2 0.036028217966882166 0.005983170842173011 0.03747833746065698 ['ENSG00000173432|ENST00000356524|SAA1'] 104744 15012 SQVMQGMGV True PC9_epitope_Rep5 935.4204731916299 935.41936993586 62.747 2 0.03601045330115456 0.005983170842173011 0.03749173464910912 ['ENSG00000169813|ENST00000682386|HNRNPF'] 54436 15873 KYFLWVVKF True NCI_RA007_Epitope_Rep4 1228.7008518231999 1228.6997499358602 68.924 2 0.035999985074640244 0.005983170842173011 0.03749963118124378 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 132048 12531 VTTDIQVKV True PC9_epitope_Rep5 1001.5757108797299 1001.5746099358599 53.199 2 0.035997885586822265 0.005983170842173011 0.03750121506802818 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 43863 11686 IHSSIVSTL True PC9_epitope_Rep4 955.5338460677501 955.53274993586 52.714 2 0.035995324761691844 0.005983170842173011 0.037503147073292664 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 106919 7568 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4499749679298 34.064 1 0.035968085226794996 0.005983170842173011 0.0375237031699602 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 35291 13936 GRHGVFLEL True PC9_epitope_Rep4 1026.5610638750998 1026.5599699358602 61.508 2 0.035932627156413724 0.005983170842173011 0.03755047591422202 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 84856 10512 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 45.498 2 0.03593019341638794 0.005983170842173011 0.03755231412403653 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 140213 15745 YQVGVHYEL True PC9_epitope_Rep2 1106.5396597241802 1106.53856993586 65.833 2 0.03592855243883924 0.005983170842173011 0.03755355360232427 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 31335 12785 GDLPFVVPR True NCI_RA007_Epitope_Rep2 998.5549158654999 998.55380993586 54.347 2 0.03591680369361058 0.005983170842173011 0.037562428806181256 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 141961 17022 YVIEDDVNM True PC9_epitope_Rep6 1096.47467650912 1096.47356993586 78.028 2 0.03589941184367481 0.005983170842173011 0.03757557023762922 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 55109 6424 LAAARLAAA True PC9_epitope_Rep6 826.5024863698198 826.50138993586 33.329 2 0.03589300320191326 0.005983170842173011 0.037580413664640884 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 104526 11009 SQNQVQVVL True NCI_RA007_Epitope_Rep5 1013.5505587610498 1013.54946993586 48.98 2 0.03587282194196075 0.005983170842173011 0.0375956694805174 ['ENSG00000140688|ENST00000327237|RUSF1', 'nc|ENSG00000140688|Q96GQ5-2|RUSF1', 'ENST00000568491.1_1_16:31502158-31504599:-|nuORF'] 4382 18598 AINDSFLSA True PC9_epitope_Rep4 936.45526139388 936.45416993586 79.614 2 0.035870887118814976 0.005983170842173011 0.03759713237140207 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.G703D|1|0.38|ENSG00000022556|chr19:54985124-54985124|G/A|missense_variant'] 49898 17971 KIIDETMAQL True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 74.142 2 0.035870727688422976 0.005983170842173011 0.03759725291653499 ['ENSG00000072501|ENST00000322213|SMC1A'] 40128 12220 HPYLPINSA True PC9_epitope_Rep2 1010.51853035678 1010.51742993586 52.317 2 0.03586024129023114 0.005983170842173011 0.03760518240374362 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 133540 18842 VWSDVTPLTF True NCI_RA007_Epitope_Rep1 1163.58627556343 1163.5851699358602 77.435 2 0.035854262754722865 0.005983170842173011 0.03760970383288215 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 73455 15363 MVAPAVASV True PC9_epitope_Rep2 843.4524249429099 843.45187496793 64.375 1 0.035851542264547356 0.005983170842173011 0.03761176143271924 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 32108 11966 GETIFVTA True NCI_RA007_Epitope_Rep4 836.42798401688 836.42743496793 53.029 1 0.035848236212064545 0.005983170842173011 0.037614262044360636 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 124713 15373 VHAEEVIVL True PC9_epitope_Rep4 1007.5651461960299 1007.56404993586 67.065 2 0.03583867903793107 0.005983170842173011 0.03762149164922593 ['ENSG00000120733|ENST00000314358|KDM3B'] 104681 16998 SQTSATFQL True PC9_epitope_Rep2 981.4767251144499 981.47562993586 70.632 2 0.03583669989664057 0.005983170842173011 0.037622988937448615 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 135982 20896 WQLLLPTAL True NCI_RA007_Epitope_Rep5 1053.62226714933 1053.62116993586 87.373 2 0.03583021439430329 0.005983170842173011 0.0376278958032494 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 38535 20758 HESDWQWAL True PC9_epitope_Rep1 1170.50942222506 1170.50832993586 84.674 2 0.03582725833362406 0.005983170842173011 0.03763013251254496 ['ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 103416 8341 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 37.454 2 0.03581628586322627 0.005983170842173011 0.03763843585956924 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 18707 6554 ELALGQDR True PC9_epitope_Rep2 900.46649478392 900.46538993586 30.623 2 0.0358089789937698 0.005983170842173011 0.037643966164914645 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 28443 10341 FSDGRVLCY True H1975_Epitope_Rep2 1058.48551597634 1058.4844099358602 44.785 2 0.035803571110495425 0.005983170842173011 0.03764805964854997 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 48699 15150 KAYTSQFVSL True PC9_epitope_Rep4 1142.5971746003 1142.5960699358602 66.201 2 0.03579640123271854 0.005983170842173011 0.037653487462721055 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT1|p.V504L|1|0.07|ENSG00000198380|chr2:69329771-69329771|C/A|missense_variant'] 28169 7972 FRDQNPEQL True PC9_epitope_Rep4 1145.5465360097699 1145.54542993586 38.11 2 0.035791529573252163 0.005983170842173011 0.03765717584209321 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 24335 7142 EYVRNQQTI True PC9_epitope_Rep3 1149.57783613805 1149.5767299358602 32.485 2 0.035789448208192194 0.005983170842173011 0.03765875175843968 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 35888 5058 GTNPGIITK True NCI_RA007_Epitope_Rep2 899.50763131991 899.50652993586 24.3 2 0.03578816926493488 0.005983170842173011 0.037659720145233354 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 93643 5459 RQREQEIAL True NCI_RA007_Epitope_Rep4 1141.6203696563698 1141.61872490379 27.581 3 0.03576448140618004 0.005983170842173011 0.03767765994548128 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'GIGYF2|p.R806P|1|0.11|ENSG00000204120|chr2:232819873-232819873|G/C|missense_variant'] 9515 6570 AVVVVDDR True PC9_epitope_Rep1 871.4763311916298 871.4752299358599 30.076 2 0.03575502622238276 0.005983170842173011 0.037684822811548176 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 101457 18931 SLLAAALLY True H1975_Epitope_Rep3 933.55351888317 933.55297496793 79.387 1 0.03572954763587585 0.005983170842173011 0.0377041302203389 ['ENSG00000197136|ENST00000355703|PCNX3'] 97416 11394 SEDYPAALP True H1975_Epitope_Rep3 961.4392769765699 961.43816993586 48.94 2 0.0357124805569922 0.005983170842173011 0.03771706825654988 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 36769 14487 GVKQLIVGV True PC9_epitope_Rep4 911.5804023373498 911.57930993586 63.635 2 0.03570093862796161 0.005983170842173011 0.03772582001827085 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000401075.3_1_1:31961199-31961370:-|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 655 10666 AATEIVERV True PC9_epitope_Rep3 986.53965972418 986.53856993586 45.973 2 0.03569874127380567 0.005983170842173011 0.037727486378795826 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 87565 10332 QQLGKVVQV True PC9_epitope_Rep3 997.5920296502098 997.59092993586 44.686 2 0.03569790015053929 0.005983170842173011 0.03772812426031007 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 26441 18080 FIDDANYSV True PC9_epitope_Rep2 1042.4607406971402 1042.46017496793 74.846 1 0.035692890725212 0.005983170842173011 0.03773192344446382 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 43647 16162 IHDDLPTEL True PC9_epitope_Rep1 1051.5185899264302 1051.51748993586 66.981 2 0.03569122577454031 0.005983170842173011 0.037733186228210196 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 32022 6881 GEQRSRFLAV True H1975_Epitope_Rep2 1161.6254550368099 1161.62380490379 31.389 3 0.03568553172111235 0.005983170842173011 0.03773750516558335 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 87283 13988 QPQLPYSQA True PC9_epitope_Rep1 1030.5083595959 1030.5072699358602 58.643 2 0.035676774667767995 0.0060047179927085565 0.03774414822089379 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 26859 14819 FLDDSTALY True H1975_Epitope_Rep2 1043.48114178855 1043.48057496793 62.158 1 0.03567511822006879 0.0060047179927085565 0.03774540490717904 ['ENSG00000100558|ENST00000216446|PLEK2'] 132180 11196 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 49.951 2 0.03566659286375716 0.0060047179927085565 0.03775187335510948 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 7666 8857 ASITALEAK True PC9_epitope_Rep3 902.50729696674 902.50618993586 39.02 2 0.03565925526823931 0.0060047179927085565 0.037757441379623405 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 54196 12832 KVVDVDVKL True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 54.369 2 0.03565851905603505 0.0060047179927085565 0.037758000082401356 ['ENSG00000101350|ENST00000375712|KIF3B'] 92812 5607 RPAPQIQEA True PC9_epitope_Rep5 1008.53524305008 1008.53414993586 26.571 2 0.0356567141566554 0.0060047179927085565 0.037759369829523694 ['nc|ENSG00000197696|P08949-2|NMB'] 55097 7196 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 33.07 2 0.03565221990100583 0.0060047179927085565 0.03776278072906458 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 89453 12203 QYESKVFYL True NCI_RA007_Epitope_Rep5 1175.5862755634298 1175.5851699358602 53.591 2 0.03563778634092869 0.0060047179927085565 0.03777373682927603 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 17780 17061 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.51708993586 73.622 2 0.035625086414224114 0.0060047179927085565 0.03778337924958302 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 40580 9273 HRGTGLVL True PC9_epitope_Rep3 851.49773534255 851.49662993586 40.611 2 0.03560463352632552 0.0060047179927085565 0.03779891257647288 ['ENSG00000099812|ENST00000215582|MISP'] 117846 17937 TVYEGFISA True PC9_epitope_Rep6 985.4756624852898 985.47456993586 81.621 2 0.03559140517961817 0.0060047179927085565 0.03780896202874846 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 72986 18141 MQMSPALTC True PC9_epitope_Rep3 980.4129452830399 980.41239496793 74.98 1 0.03558571254087415 0.0060047179927085565 0.037813287383921736 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 21056 8275 EQVANSAFVER True PC9_epitope_Rep4 1248.6098645423197 1248.6087699358602 39.291 2 0.03558102360364947 0.0060047179927085565 0.037816850432176065 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 47214 14210 IVAPGKGILAA True PC9_epitope_Rep5 1008.6331661861998 1008.63206993586 59.665 2 0.0355762414775169 0.0060047179927085565 0.03782048459192559 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 117706 18143 TVVAAIQAV True PC9_epitope_Rep1 870.51746772762 870.51636993586 74.577 2 0.03557193636932907 0.0060047179927085565 0.03782375650163773 ['nc|ENSG00000170265|Q9UDV7-2|ZNF282', 'ENSG00000170265|ENST00000610704|ZNF282', 'ZNF282|p.E109K|1|0.09|ENSG00000170265|chr7:149198492-149198492|G/A|missense_variant'] 110218 5299 TEQPSVSP True H1975_Epitope_Rep3 843.3974121645899 843.39686496793 25.462 1 0.03556990110795631 0.0060047179927085565 0.03782530339840001 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.I804Yfs*16|1|0.14|ENSG00000197056|chr1:35114240-35114240|A/-|frameshift_variant', 'ZMYM1|p.D473Mfs*48|1|0.09|ENSG00000197056|chr1:35113241-35113241|A/-|frameshift_variant'] 138702 15066 YINGGELFY True H1975_Epitope_Rep3 1074.5022115862998 1074.5016749679298 63.344 1 0.03554382429515152 0.006026105182926829 0.037845127869625024 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF'] 60532 9028 LHDINAQM True PC9_epitope_Rep5 940.4436511643601 940.44254993586 39.672 2 0.035527720052328585 0.006026105182926829 0.0378573753396614 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 8876 19502 AVFPHLTVV True PC9_epitope_Rep2 981.5647522732099 981.56364993586 80.397 2 0.03552577925196527 0.006026105182926829 0.037858851572774736 ['ENSG00000134825|ENST00000537328|TMEM258'] 37977 13038 HAGVISVL True PC9_epitope_Rep4 794.46503823194 794.46394993586 58.045 2 0.0355235587763985 0.006026105182926829 0.03786054059653154 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 14901 22101 DYATIFNNL True PC9_epitope_Rep4 1069.5080252427301 1069.5069299358602 93.228 2 0.0355177291041601 0.006026105182926829 0.03786497529640615 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 71757 4280 M[Oxidation]EERAQLEA True H1975_Epitope_Rep2 1091.4917239360298 1091.4906299358602 21.577 2 0.035517135883745714 0.006026105182926829 0.03786542659126561 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2'] 6661 16873 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 77.419 2 0.035516416084146345 0.006026105182926829 0.03786597418799696 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 57952 9989 LEGNLPVSA True H1975_Epitope_Rep3 898.47599683846 898.47544496793 43.46 1 0.035515719364593225 0.006026105182926829 0.03786650423280316 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 15256 12187 EAEPHPLWEY True H1975_Epitope_Rep3 1269.56660274801 1269.56550993586 52.049 2 0.03551423860696396 0.006026105182926829 0.037867630773196624 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 43636 9008 IGYNPDTV True H1975_Epitope_Rep1 877.41814760917 877.4175949679301 39.553 1 0.035506073181077506 0.006026105182926829 0.03787384343881721 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000443590.1_1_2:107314489-107314633:-|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 11831 16126 DHGGVIVAI True PC9_epitope_Rep5 879.48141657207 879.48030993586 67.019 2 0.03550423203841274 0.006026105182926829 0.037875244394139605 ['SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2'] 137830 11513 YERPVDYLP True NCI_RA007_Epitope_Rep5 1150.5658744720197 1150.56476993586 50.936 2 0.03549320942057042 0.006026105182926829 0.03788363261901181 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 20038 10780 EMDPSGQLNEY True H1975_Epitope_Rep2 1281.5183322262499 1281.51722993586 46.496 2 0.035490214808853594 0.006026105182926829 0.037885911799128265 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 104662 16311 SQTLLSVL True NCI_RA007_Epitope_Rep4 859.50148331031 859.5009349679301 70.738 1 0.03548173145532765 0.006026105182926829 0.03789236906902799 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF', 'ENSG00000176101|ENST00000322310|SSNA1', 'ENST00000463511.1_1_9:140083297-140084363:+|nuORF', 'ENST00000459860.1_1_9:140083297-140084363:+|nuORF'] 125933 14247 VLDDNRLLT True PC9_epitope_Rep4 1057.57677350889 1057.57566993586 62.707 2 0.03547866787368437 0.006026105182926829 0.0378947012075142 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'DYNC2H1|p.G2197Wfs*36|1|0.44|ENSG00000187240|chr11:103185004-103185005|-/T|frameshift_variant'] 61539 5375 LKGDDLQAIKK True PC9_epitope_Rep3 1227.7186867153098 1227.71704490379 25.749 3 0.03547227217076955 0.006026105182926829 0.037899570308671963 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 29149 18296 FTPDVKVWEV True PC9_epitope_Rep6 1218.62847472858 1218.62736993586 83.018 2 0.03546691904914942 0.006026105182926829 0.03790364609949894 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 141450 17872 YTGEGQWEV True PC9_epitope_Rep1 1067.45598966987 1067.4548899358601 73.539 2 0.035463059647303216 0.006048915243742707 0.03790658482812388 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 133363 18837 VVVGDLVEV True PC9_epitope_Rep6 927.5276980581499 927.5271449679301 85.101 1 0.03544892858090251 0.006048915243742707 0.03791734656063192 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 78531 13427 NYPQSVPRL True PC9_epitope_Rep1 1072.56654317836 1072.5654499358602 56.508 2 0.03542488470476685 0.006048915243742707 0.0379356636109405 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 37988 14433 HAIPPTLAM True PC9_epitope_Rep5 949.5055231449301 949.50442993586 60.516 2 0.03540298815764559 0.006048915243742707 0.037952351435396846 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 97667 9043 SEHGLVVIA True H1975_Epitope_Rep2 923.5076313199099 923.50652993586 39.737 2 0.03540237032428394 0.006048915243742707 0.03795282239128494 ['ENSG00000139684|ENST00000378720|ESD'] 136956 10129 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.3808149679301 46.637 1 0.03539968173879063 0.006048915243742707 0.03795487187833388 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 28673 17216 FSPAGPILSIR True PC9_epitope_Rep6 1156.6604435632 1156.65934993586 78.812 2 0.035395604888170694 0.006048915243742707 0.03795797981101979 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 110527 22700 TFLDDSGSLNW True PC9_epitope_Rep1 1253.5564319871298 1253.55532993586 92.119 2 0.03538887824584082 0.0060695499012210505 0.037963108257469146 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 1262 9694 AEDGYSGVEV True H1975_Epitope_Rep2 1024.4349198721197 1024.43437496793 42.269 1 0.03538540886266909 0.0060695499012210505 0.03796575357708094 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 96465 13624 SAAMPGASL True PC9_epitope_Rep5 803.38473930591 803.3841949679301 57.427 1 0.03538306742033971 0.0060695499012210505 0.037967538959405134 ['ENSG00000086062|ENST00000379731|B4GALT1'] 104403 21841 SQLDIIIHSL True PC9_epitope_Rep1 1137.63937376545 1137.63826993586 88.822 2 0.03538255860086294 0.0060695499012210505 0.037967926950917594 ['ENSG00000079246|ENST00000392132|XRCC5'] 135181 2756 WEQQEPGERKL True H1975_Epitope_Rep2 1398.6891774921799 1398.68752490379 14.629 3 0.035371079533300764 0.0060695499012210505 0.03797668102567587 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 39959 9112 HPKYSDMIVA True PC9_epitope_Rep6 1159.56957995347 1159.56848993586 45.141 2 0.035341584430166814 0.0060695499012210505 0.03799918233749483 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 41526 20266 HYPPVQVLF True PC9_epitope_Rep1 1098.58621599378 1098.5851099358601 82.784 2 0.03532984196182739 0.0060695499012210505 0.03800814366946504 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 54904 11694 KYPNVFKKI True PC9_epitope_Rep3 1135.67536535135 1135.67371490379 50.001 3 0.03532887927966757 0.0060695499012210505 0.03800887842678315 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 101821 22296 SLPEVLPIL True PC9_epitope_Rep4 979.5953836951498 979.5948349679301 94.0 1 0.03531472590113702 0.0060695499012210505 0.03801968226375908 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 39077 8976 HHSTPLIV True PC9_epitope_Rep1 902.4974009893799 902.49630993586 39.372 2 0.035312695352377715 0.0060695499012210505 0.0380212324798571 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 2651 9581 AESLPGVEA True H1975_Epitope_Rep2 871.4287122928699 871.42816496793 41.829 1 0.035309733417864336 0.0060695499012210505 0.0380234938573456 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 54696 18773 KYLVIGDLLF True NCI_RA007_Epitope_Rep5 1179.69034670915 1179.68924993586 79.045 2 0.0352993010282953 0.0060695499012210505 0.03803145970187027 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 31913 12406 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43661496793 52.805 1 0.03528646230846906 0.0060695499012210505 0.038041264921826246 ['ENSG00000100726|ENST00000262319|TELO2'] 142841 13462 YYTDIMHTL True NCI_RA007_Epitope_Rep5 1155.5270464351497 1155.5259499358601 58.467 2 0.03527593243783666 0.0060695499012210505 0.038049308450325024 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 87766 8154 QRDEKVLEL True PC9_epitope_Rep6 1128.6138872935999 1128.61225490379 40.909 3 0.0352625965594648 0.0060695499012210505 0.03805949753124933 ['ENSG00000135968|ENST00000309863|GCC2'] 102027 5563 SLQSVAEER True NCI_RA007_Epitope_Rep4 1017.5090878718898 1017.50798993586 28.0 2 0.03526098655164259 0.0060695499012210505 0.038060727793264644 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 111808 23761 TILPAIILV True PC9_epitope_Rep1 951.63685458431 951.63574993586 96.192 2 0.03524762019583211 0.0060695499012210505 0.038070942808161645 ['ENSG00000198712|ENST00000361739|MT-CO2'] 44653 16915 ILSKDGVLYV True PC9_epitope_Rep2 1105.63831113629 1105.63720993586 70.308 2 0.035247485324617765 0.0060695499012210505 0.038071045893299814 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 7720 4332 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep4 990.4618036426001 990.46070993586 23.089 2 0.03524465909327794 0.0060695499012210505 0.03807320610164569 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 135077 9505 WEDDVNHSF True H1975_Epitope_Rep2 1147.45705229903 1147.4559499358602 41.53 2 0.035231699200911716 0.0060695499012210505 0.03808311325135358 ['ANLN-EEPD1|2|fusion', 'nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 89408 13513 QYASAFHFL True NCI_RA007_Epitope_Rep3 1082.51853035678 1082.51742993586 60.442 2 0.035219811787163095 0.0060695499012210505 0.038092202504477535 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 97423 11127 SEEDPVTSIP True H1975_Epitope_Rep3 1072.49243474824 1072.4913299358602 47.896 2 0.035211583181263224 0.0060695499012210505 0.03809849528759631 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 47921 8905 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.68958993586 40.914 2 0.0352038715168784 0.006085530225592507 0.03810439355680615 ['ENSG00000103479|ENST00000262133|RBL2'] 47425 21346 IVLPEDLQL True PC9_epitope_Rep4 1038.5961119711399 1038.59557496793 90.276 1 0.03520298995314757 0.006085530225592507 0.038105067871326635 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 62134 4012 LLEGEESR True PC9_epitope_Rep4 931.4610750503099 931.45996993586 21.676 2 0.03519384591737185 0.006085530225592507 0.038112062818348474 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 27231 21994 FLPDPSALQNL True PC9_epitope_Rep3 1213.6342883850098 1213.6331899358602 89.899 2 0.03516833921876409 0.006085530225592507 0.03813158062942936 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 102390 12208 SLTGRLDEV True PC9_epitope_Rep2 988.5189242795999 988.51782993586 52.269 2 0.0351502320223665 0.006085530225592507 0.0381454415512493 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 99137 13927 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.4914349679301 58.649 1 0.03514186998671334 0.006085530225592507 0.03815184409366495 ['ENSG00000132646|ENST00000379143|PCNA'] 69489 18964 LVAPPLPAA True PC9_epitope_Rep5 847.51673945163 847.51564993586 77.969 2 0.03512493753033635 0.006085530225592507 0.03816481157224697 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 105634 11107 SSDTADFRDLY True H1975_Epitope_Rep1 1288.55716026312 1288.55606993586 47.687 2 0.03510174783668144 0.006085530225592507 0.0381825772368385 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 115025 6659 TRATEGMVVA True PC9_epitope_Rep4 1033.5226297610498 1033.5215299358601 32.787 2 0.035101262811658776 0.006085530225592507 0.038182948891519075 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 37519 9272 GVVDPVHGV True PC9_epitope_Rep6 877.46576650793 877.46466993586 45.819 2 0.03509045142981416 0.006085530225592507 0.03819123401797185 ['ENSG00000261150|ENST00000615648|EPPK1'] 125317 6270 VIPELNGK True NCI_RA007_Epitope_Rep3 868.50181766348 868.50072993586 31.666 2 0.03503360752080067 0.006085530225592507 0.03823482094256141 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 115556 9383 TRSPSVCL True PC9_epitope_Rep5 861.4378375079299 861.43674993586 41.046 2 0.03502432345101765 0.006085530225592507 0.03824194388171137 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 74130 13616 NEAWNGFVAA True NCI_RA007_Epitope_Rep3 1077.4879585044898 1077.48686993586 60.858 2 0.03502281170799808 0.006085530225592507 0.03824310383201867 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 73478 18138 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep5 989.5467196310099 989.54617496793 76.574 1 0.03501303278595264 0.006085530225592507 0.038250607866653984 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 96182 12114 RYPDSHQLF True PC9_epitope_Rep1 1161.55670677065 1161.5550749037902 51.459 3 0.03499262246871354 0.006085530225592507 0.038266274188860055 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 8867 21855 AVFPDDMPTL True PC9_epitope_Rep2 1104.51614739828 1104.51557496793 89.541 1 0.03499037573015433 0.006085530225592507 0.03826799905333114 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 133493 24146 VWFPDMMPTW True PC9_epitope_Rep5 1308.5671374253197 1308.5660299358601 97.864 2 0.03498636365360667 0.006085530225592507 0.038271079368585446 ['ENSG00000005812|ENST00000355619|FBXL3'] 6868 11134 AQIDGTLST True PC9_epitope_Rep5 904.4501760134401 904.44906993586 47.812 2 0.03498532979130255 0.006085530225592507 0.03827187316222959 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 108177 19775 SYGDILHVI True PC9_epitope_Rep4 1015.53384606775 1015.53274993586 84.19 2 0.034970386537292814 0.006085530225592507 0.038283348094464376 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 73713 20006 MYSDVWKQL True PC9_epitope_Rep1 1168.5586809166 1168.55758993586 81.781 2 0.034965731960566286 0.006085530225592507 0.03828692295232175 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 85225 9113 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57797496793 40.042 1 0.03496056800615922 0.006085530225592507 0.038290889364777515 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 95098 14854 RVAPPGLTQI True PC9_epitope_Rep5 1050.61857875122 1050.61748993586 62.137 2 0.034958121127888875 0.006085530225592507 0.03829276892580934 ['ATP1B1|p.K203Efs*3|1|0.39|ENSG00000143153|chr1:169130047-169130048|-/G|frameshift_variant', 'nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 8667 20099 AVAGATSLVTL True PC9_epitope_Rep2 1001.57571087973 1001.5746099358599 82.719 2 0.03494487900350051 0.006085530225592507 0.03830294219823224 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 47125 19926 ITVGDIAQV True PC9_epitope_Rep3 914.50729696674 914.50618993586 81.887 2 0.034931524617599394 0.006085530225592507 0.03831320407626538 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'nc|ENSG00000070961|P20020-5|ATP2B1', 'nc|ENSG00000070961|P20020-2|ATP2B1', 'ATP2B1|p.D756Efs*18|1|0.19|ENSG00000070961|chr12:89610467-89610488|TCGAAGTTTTGGCCAAATCTTG/-|frameshift_variant'] 122993 12805 VGIDIFTGK True NCI_RA007_Epitope_Rep1 948.52803241132 948.52692993586 53.796 2 0.0349280446308981 0.006085530225592507 0.03831587858332488 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 96195 20489 RYPDTIALTF True PC9_epitope_Rep5 1195.62372370131 1195.62262993586 83.851 2 0.03492446431333193 0.006085530225592507 0.038318630366650376 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'ENST00000505061.5_1_15:42105116-42107966:+|nuORF', 'nc|ENSG00000137802|O60336-2|MAPKBP1'] 71286 20126 LYQDGVFKF True PC9_epitope_Rep1 1115.56514619603 1115.56404993586 82.245 2 0.03490823336872483 0.006085530225592507 0.03833110738741063 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 106412 3345 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 18.656 3 0.034901862018857456 0.006085530225592507 0.03833600611680759 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 60900 12248 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 54.929 2 0.03489532257017352 0.006085530225592507 0.038341034653495115 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 122134 12006 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 51.263 1 0.03486979279881241 0.006085530225592507 0.03836067132405496 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 14346 4721 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 23.528 2 0.034862333514837855 0.006085530225592507 0.03836641039972302 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 35188 9590 GRADGYVL True PC9_epitope_Rep2 849.43446637965 849.43336993586 42.232 2 0.03485725889796008 0.006085530225592507 0.03837031516681623 ['ENSG00000142937|ENST00000396651|RPS8'] 142758 17981 YYQRGSSMVLF True PC9_epitope_Rep4 1349.64380752289 1349.64270993586 77.218 2 0.03484797460204973 0.006085530225592507 0.038377460043965195 ['ENSG00000171867|ENST00000379440|PRNP'] 1714 3649 AEGPGLSR True NCI_RA007_Epitope_Rep2 785.4031662513701 785.40206993586 18.843 2 0.03483632602498052 0.006085530225592507 0.03838642601366749 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 134588 21846 VYSGGVYLF True PC9_epitope_Rep5 1003.5014833103099 1003.50038993586 89.065 2 0.03482540038557454 0.006085530225592507 0.038394837175860994 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 34983 22294 GQSELTLLL True PC9_epitope_Rep5 972.54916177872 972.54861496793 90.761 1 0.034815460008867725 0.006085530225592507 0.03840249120876702 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 47263 12463 IVDEAIYY True H1975_Epitope_Rep1 984.4804135125601 984.4798649679301 52.976 1 0.03480755696859919 0.006085530225592507 0.03840857744300303 ['ENSG00000111229|ENST00000228825|ARPC3'] 79271 8585 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 37.963 2 0.03479062974189572 0.006085530225592507 0.03842161611887587 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 16736 8243 EESPVQYAA True H1975_Epitope_Rep1 992.4450906329998 992.44398993586 36.649 2 0.03478928866341359 0.006085530225592507 0.03842264928568299 ['ENSG00000143653|ENST00000366510|SCCPDH'] 38541 9945 HESLFGSVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 43.242 2 0.03478642343359034 0.006085530225592507 0.03842485673887004 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 2634 10626 AESEITIAP True H1975_Epitope_Rep2 929.4705771048499 929.46948993586 45.896 2 0.03478457654811835 0.006085530225592507 0.03842627968903854 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 8310 17979 ATINEVVQV True PC9_epitope_Rep3 971.52876068731 971.52766993586 74.36 2 0.03478339681751879 0.006085530225592507 0.03842718864727821 ['ENSG00000171940|ENST00000371471|ZNF217'] 118622 19751 TYSIGFLRF True PC9_epitope_Rep6 1102.5811306133398 1102.58002993586 88.632 2 0.0347763175577737 0.006085530225592507 0.03843264346111621 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 133204 11345 VVSEGVPRI True PC9_epitope_Rep2 954.5498304850599 954.54872993586 48.958 2 0.034771648902006756 0.006085530225592507 0.03843624118668834 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 105433 6871 SRTPGQVL True PC9_epitope_Rep1 856.4766655447999 856.47556993586 31.234 2 0.034768945027258365 0.006085530225592507 0.038438324959754584 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 8672 16662 AVAGILKQL True PC9_epitope_Rep2 911.58040233735 911.57930993586 69.334 2 0.0347516246069066 0.006085530225592507 0.0384516754567048 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'nc|ENSG00000068878|Q14997-3|PSME4'] 102900 10166 SPAPQGVTV True PC9_epitope_Rep2 854.4497820906199 854.44868993586 44.441 2 0.03474737446693959 0.006085530225592507 0.03845495205489535 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 118935 13354 VADRLLVEL True NCI_RA007_Epitope_Rep4 1026.6073453611798 1026.6062499358602 58.519 2 0.034745847280749045 0.006085530225592507 0.03845612948090013 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B'] 35796 13207 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 62.451 2 0.03474448902210849 0.006085530225592507 0.03845717669369492 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 102512 7854 SLVNLGGSK True PC9_epitope_Rep6 873.4919812557699 873.49088993586 39.61 2 0.03473178600275528 0.006085530225592507 0.0384669718684794 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 107355 19105 SVLGSLSSV True PC9_epitope_Rep4 847.4650978015901 847.46454496793 81.579 1 0.034722814654032354 0.006085530225592507 0.03847389088391469 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF', 'nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 119681 12848 VAVGVIKAV True PC9_epitope_Rep5 854.5589386167799 854.55784993586 54.43 2 0.03472151941761511 0.006085530225592507 0.038474889903794114 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 25368 9025 FEADPPGQVAA True H1975_Epitope_Rep3 1100.51383889916 1100.51274993586 39.709 2 0.03469760340445238 0.006085530225592507 0.03849334041756476 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 114544 16091 TQAPPNVVL True PC9_epitope_Rep5 937.5232813840499 937.52218993586 66.882 2 0.03468686531456944 0.006085530225592507 0.0385016270242803 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 119059 10539 VAGGAVYL True H1975_Epitope_Rep3 748.4119400299201 748.41139496793 45.605 1 0.03468661022691065 0.006107704738818385 0.03850182389466115 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 40125 16609 HPYLFPVAA True PC9_epitope_Rep6 1013.5334521449298 1013.53234993586 76.343 2 0.034681535614862556 0.006107704738818385 0.03850574053573508 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 76365 9285 NPYYGGESA True PC9_epitope_Rep3 956.3875757568799 956.38646993586 40.656 2 0.034678706384618445 0.006107704738818385 0.038507924315664264 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 26092 13939 FGPGVAFR True PC9_epitope_Rep1 849.4497225209699 849.44862993586 58.452 2 0.03467596549443045 0.006107704738818385 0.038510040010907444 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 25363 8746 FEADPPGQVA True H1975_Epitope_Rep3 1029.47672511445 1029.47562993586 38.645 2 0.03467190161928184 0.006107704738818385 0.03851317710364169 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 135397 18820 WHDSDWIL True PC9_epitope_Rep6 1070.48214484806 1070.48104993586 85.033 2 0.03465747283266136 0.006107704738818385 0.03852431712901157 ['ENSG00000107625|ENST00000373585|DDX50'] 8654 19901 AVAELNYGL True PC9_epitope_Rep3 948.4916469026 948.49109496793 81.79 1 0.03465550738952836 0.006107704738818385 0.03852583480249018 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 120906 7386 VENPGGYVA True H1975_Epitope_Rep2 904.42904664604 904.4279499358599 33.35 2 0.034653149136061795 0.006107704738818385 0.03852765586377378 ['TFRC|p.Y211S|1|0.26|ENSG00000072274|chr3:196071451-196071451|T/G|missense_variant', 'ENSG00000072274|ENST00000360110|TFRC'] 111514 7887 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1005.4437110134398 1005.44260993586 35.313 2 0.03463775604306117 0.006107704738818385 0.03853954434987583 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 55268 19314 LADPSAFVAA True PC9_epitope_Rep1 960.4916469025999 960.49054993586 79.096 2 0.03463183653085781 0.006107704738818385 0.038544116984645375 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 97495 7902 SEELTVTNA True H1975_Epitope_Rep2 962.4556553167 962.4551049679301 35.342 1 0.03463070116820699 0.006107704738818385 0.038544994069589375 ['ENSG00000237649|ENST00000428849|KIFC1', 'KIFC1|p.R503Q|1|0.17|ENSG00000237649|chr6:33405603-33405603|G/A|missense_variant'] 21744 12985 ERTPGVLL True PC9_epitope_Rep5 883.5127167003499 883.51160993586 54.956 2 0.034613416540094546 0.006131033007770728 0.03855834883222437 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant', 'nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-4|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-5|EP400P1'] 30664 7350 GALALEEK True PC9_epitope_Rep1 829.4545331178899 829.45342993586 33.083 2 0.03461217939405519 0.006131033007770728 0.03855930485130349 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 28596 14125 FSGPAITL True H1975_Epitope_Rep3 804.43815477776 804.43760496793 59.661 1 0.03459504493874539 0.006131033007770728 0.038572547802728334 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 38245 6634 HEDVEALAA True H1975_Epitope_Rep2 953.4454249861699 953.44432993586 30.426 2 0.0345678832978236 0.006148222000664672 0.03859354863853436 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 92768 13107 RPADVIFAT True PC9_epitope_Rep4 988.5341804209199 988.53308993586 58.31 2 0.03456512211460708 0.006148222000664672 0.03859568408153937 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 40411 5918 HQVPAVSSV True PC9_epitope_Rep6 922.4872302285 922.48612993586 31.038 2 0.03455657330779112 0.006148222000664672 0.03860229620058365 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 16949 7781 EFSGNPIK True PC9_epitope_Rep5 890.4497820906199 890.44868993586 34.875 2 0.03454388133800013 0.006148222000664672 0.03861211467061267 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 128396 6568 VPRPETAVA True PC9_epitope_Rep1 938.5185303567798 938.51742993586 30.069 2 0.03453607299406414 0.006148222000664672 0.03861815625117244 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 89255 14303 QVVGKLIEV True PC9_epitope_Rep4 983.6015317047498 983.60042993586 62.917 2 0.03452913094446658 0.006148222000664672 0.038623528234290536 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 129320 14548 VQYEGNINV True PC9_epitope_Rep2 1034.50327421546 1034.5021699358601 61.231 2 0.03452588163773562 0.006148222000664672 0.03862604287439376 ['SLFN5|p.E282Kfs*34|1|0.15|ENSG00000166750|chr17:35259530-35259530|C/-|frameshift_variant', 'nc|ENSG00000166750|Q08AF3-2|SLFN5', 'ENSG00000166750|ENST00000299977|SLFN5'] 141958 19196 YVIEDDVNM True PC9_epitope_Rep3 1096.47467650912 1096.47417496793 79.055 1 0.03451962316547849 0.006148222000664672 0.038630886706658873 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 40562 12017 HRGIELTL True PC9_epitope_Rep2 937.53451477409 937.53340993586 51.54 2 0.034518956034411345 0.006148222000664672 0.03863140307295506 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'nc|ENSG00000176974|P34896-4|SHMT1'] 90426 6983 REIKFTVQA True H1975_Epitope_Rep1 1090.61349337078 1090.6123899358602 31.9 2 0.03449848921276425 0.006148222000664672 0.03864724749267111 ['ENSG00000109929|ENST00000264027|SC5D', 'ENST00000534455.5_1_11:121174081-121175207:+|nuORF', 'ENST00000531140.1_1_11:121174081-121177378:+|nuORF', 'ENST00000524683.5_1_11:121175009-121175207:+|nuORF'] 89491 18570 QYIEELQKF True PC9_epitope_Rep1 1196.6077392839995 1196.60664993586 76.218 2 0.034494975037120644 0.006148222000664672 0.03864996855989282 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'RALGPS2|p.D401Mfs*5|1|0.09|ENSG00000116191|chr1:178889650-178889650|G/-|frameshift_variant', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 101863 13612 SLPKKLALL True PC9_epitope_Rep2 981.6586526580498 981.65754993586 57.65 2 0.03449245442689559 0.006148222000664672 0.03865192039945253 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 66563 21412 LSIEQLTTL True PC9_epitope_Rep4 1016.5753765265599 1016.57426993586 90.537 2 0.034485712616517505 0.006148222000664672 0.03865714135104824 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 8731 19820 AVATDFFTV True PC9_epitope_Rep6 969.48074786573 969.4801949679301 88.896 1 0.03448166321756143 0.006148222000664672 0.03866027755385475 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 134487 11091 VYPSSLSKI True PC9_epitope_Rep6 992.5542471591599 992.55314993586 53.585 2 0.034475525418469384 0.006148222000664672 0.03866503161119736 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 87420 16121 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.46262993586 66.825 2 0.03447091354425817 0.006148222000664672 0.0386686040885288 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 77792 18182 NTTDIFQTV True PC9_epitope_Rep6 1037.50293986229 1037.5023749679299 82.577 1 0.03443992882923996 0.006148222000664672 0.038692613024701464 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 14235 5606 DSIKLDDDSER True NCI_RA007_Epitope_Rep1 1291.5891886673899 1291.58755490379 25.87 3 0.034406631283425894 0.006148222000664672 0.03871842840144451 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'ENST00000541058.1_1_12:67663497-67675834:+|nuORF', 'ENST00000539434.1_1_12:67663527-67686741:+|nuORF'] 138305 9688 YHDHTKIII True PC9_epitope_Rep1 1138.61349337078 1138.6118549037901 42.121 3 0.03439731622520421 0.006148222000664672 0.0387256529619954 ['ENSG00000145632|ENST00000274289|PLK2'] 92060 5564 RKTYVNTTL True NCI_RA007_Epitope_Rep4 1094.6084079903399 1094.60730993586 28.004 2 0.03437358850101171 0.006148222000664672 0.03874406092410231 ['nc|ENSG00000120156|Q02763-3|TEK', 'nc|ENSG00000120156|Q02763-2|TEK', 'ENSG00000120156|ENST00000380036|TEK'] 61906 7396 LLDEHHISY True H1975_Epitope_Rep3 1125.54547338061 1125.54382490379 33.427 3 0.034372702834450986 0.006148222000664672 0.03874474816983957 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 2858 5728 AEVEPTPEA True NCI_RA007_Epitope_Rep3 941.4341915961298 941.43308993586 29.508 2 0.034368751711147304 0.006148222000664672 0.03874781422881541 ['ENSG00000186834|ENST00000332499|HEXIM1'] 122398 14708 VGDPSVHLL True PC9_epitope_Rep2 935.5076313199099 935.50652993586 61.842 2 0.03436432031493509 0.006148222000664672 0.038751253226600446 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 45644 14386 IRDPFIHEI True PC9_epitope_Rep4 1138.6134933707801 1138.6118549037901 63.246 3 0.03434497412120859 0.006148222000664672 0.038766269974546165 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 104747 13622 SQVPEVTTV True PC9_epitope_Rep2 958.49712620586 958.49602993586 57.689 2 0.03433299414823641 0.006148222000664672 0.038775571485449405 ['ENSG00000196455|ENST00000356763|PIK3R4'] 17296 15662 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50708496793 65.255 1 0.034328556294697526 0.006148222000664672 0.03877901761896697 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 96661 8608 SAIQSISHV True PC9_epitope_Rep6 940.4977949122 940.49668993586 42.923 2 0.03430870647841231 0.006148222000664672 0.03879443485650051 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 108759 14203 SYSMIVNNL True NCI_RA007_Epitope_Rep4 1039.50083168731 1039.4997299358602 61.913 2 0.034298059252431665 0.006148222000664672 0.038802706669713666 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 24519 20611 FAFPGSTNSL True PC9_epitope_Rep2 1039.49746055903 1039.49636993586 84.714 2 0.0342950439070358 0.006148222000664672 0.03880504956274364 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 2457 10941 AEQLAKWIA True H1975_Epitope_Rep3 1028.5654805491997 1028.5643899358602 47.171 2 0.03429317579260495 0.006148222000664672 0.03880650112995953 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 93561 9559 RQLPAMTAL True NCI_RA007_Epitope_Rep3 999.5535359665099 999.55242993586 44.687 2 0.034274548212510914 0.006148222000664672 0.038820977738800666 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 17705 5974 EHNDLQYAA True PC9_epitope_Rep6 1059.46213767947 1059.46104993586 31.295 2 0.0342699821965828 0.006148222000664672 0.038824526972848876 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 110015 11188 TEIVKILSA True H1975_Epitope_Rep3 972.5855472874399 972.58444993586 48.132 2 0.03425593884288988 0.006148222000664672 0.038835444837493814 ['nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 107301 15590 SVLDSFLKY True NCI_RA007_Epitope_Rep3 1070.5648118428599 1070.56370993586 68.901 2 0.03424666728004316 0.006148222000664672 0.038842654369592035 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 118005 11966 TYDYNFHSF True NCI_RA007_Epitope_Rep5 1192.48253877088 1192.4814499358602 52.684 2 0.034246434086627905 0.006148222000664672 0.03884283571476009 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 136814 11360 YAAGVHSVL True PC9_epitope_Rep5 915.4814165720701 915.48030993586 48.692 2 0.03423508042108822 0.006148222000664672 0.03885166588681255 ['ENSG00000242802|ENST00000649063|AP5Z1', 'ENST00000490487.1_1_7:4829477-4830874:+|nuORF'] 108487 19692 SYMFVDENTF True PC9_epitope_Rep6 1251.5117902938298 1251.51068993586 88.402 2 0.03423403388126319 0.006148222000664672 0.03885247990711049 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 24717 6794 FANGRSTGL True PC9_epitope_Rep5 921.46682913709 921.4657299358599 31.104 2 0.03423150110954442 0.006148222000664672 0.038854450010043826 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 87500 18881 QQFQEPFVAV True PC9_epitope_Rep6 1191.59242357303 1191.5913299358601 85.275 2 0.03422533666840865 0.006148222000664672 0.038859245346965575 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67958045-67971691:-|nuORF'] 103744 13411 SPVPIAPTA True PC9_epitope_Rep5 851.47526856247 851.47416993586 56.602 2 0.03421769302598852 0.006148222000664672 0.03886519206640757 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 96030 13939 RYLPTGSFPF True NCI_RA007_Epitope_Rep3 1183.6025943339098 1183.6014899358602 62.14 2 0.034210670906054966 0.006148222000664672 0.0388706559345328 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3', 'TUSC3|p.H282Gfs*15|1|0.08|ENSG00000104723|chr8:15730708-15730718|TCACACATTAT/-|frameshift_variant'] 106513 18302 STLPDVTEV True PC9_epitope_Rep5 959.48114178855 959.4805949679301 75.413 1 0.03420973574224349 0.006148222000664672 0.03887138362960352 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 3882 8683 AHAGSLTNL True PC9_epitope_Rep1 882.4559301002201 882.45482993586 38.238 2 0.034197251093457906 0.006148222000664672 0.03888109964700488 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000484998.5_1_20:2635830-2636687:+|nuORF', 'ENST00000480992.5_1_20:2635438-2636687:+|nuORF'] 41537 21728 HYPYFLIV True PC9_epitope_Rep1 1050.5538532363398 1050.5527499358602 88.408 2 0.034194003048786684 0.006148222000664672 0.038883627738645725 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 53107 7492 KPSGTTISVTA True PC9_epitope_Rep1 1060.57643915572 1060.57534993586 33.637 2 0.03418854846092062 0.006148222000664672 0.03888787359524071 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 134289 14398 VYNPTPNSL True PC9_epitope_Rep3 1003.49746055903 1003.49636993586 60.479 2 0.034168241350189324 0.0061688850926519085 0.03890368417879304 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 85765 7812 QHDPETSVL True PC9_epitope_Rep2 1024.48253877088 1024.4814499358602 35.418 2 0.034154769338944534 0.0061688850926519085 0.03891417618563642 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 97830 9141 SELPAPPAA True H1975_Epitope_Rep3 851.4388830537499 851.43833496793 40.151 1 0.034143261120543784 0.0061688850926519085 0.03892314071855785 ['ENST00000584717.1_1_17:80059560-80064242:-|nuORF'] 96415 11694 SAAFPGASL True NCI_RA007_Epitope_Rep3 819.41266830591 819.41156993586 53.114 2 0.034133988789539965 0.0061688850926519085 0.03893036485976092 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 14135 8656 DSDFRKDDFY True H1975_Epitope_Rep3 1306.5465955794198 1306.54495490379 38.291 3 0.03412550189203189 0.0061688850926519085 0.03893697807534747 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 1146 5547 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44341496793 26.344 1 0.03411114738521924 0.0061688850926519085 0.03894816568814615 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 96375 7052 RYVPRASYF True NCI_RA007_Epitope_Rep3 1157.5981776598098 1157.59654490379 34.858 3 0.03409927417803991 0.0061688850926519085 0.038957421516307704 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 76478 7497 NQGPHSPIL True PC9_epitope_Rep6 961.4981292653699 961.49702993586 38.086 2 0.03408063330528412 0.0061688850926519085 0.03897195693637187 ['ENSG00000100147|ENST00000255784|CCDC134'] 71325 20878 LYQFNPAFF True PC9_epitope_Rep6 1145.5545815123298 1145.5534899358602 93.081 2 0.03407182882633251 0.0061688850926519085 0.03897882394554309 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 114846 19631 TQNDIISTL True PC9_epitope_Rep5 1003.51858992643 1003.51807496793 80.564 1 0.03407082190217632 0.0061688850926519085 0.038979609357325834 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 105638 8119 SSDTSALSY True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 36.179 1 0.03406571376925976 0.0061688850926519085 0.03898359396627218 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 16363 5938 EEILAQAK True PC9_epitope_Rep2 900.4916469026 900.49054993586 28.23 2 0.03406227479873192 0.0061688850926519085 0.03898627673927067 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 105457 14945 SRVDLSNVL True PC9_epitope_Rep6 1001.5505587610501 1001.54946993586 69.49 2 0.034048809822192286 0.0061688850926519085 0.03899678242182048 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000196873|Q5JTY5-2|ZNG1C', 'ENST00000382436.3_9:42674366-42714533:+|nuORF', 'ENST00000456188.5_1_2:114214762-114253317:+|nuORF'] 72002 5588 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 26.534 2 0.03404502963816524 0.0061688850926519085 0.0389997322456965 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 78182 13942 NYATRIVTL True PC9_epitope_Rep6 1049.58694426977 1049.58584993586 65.477 2 0.03404274262159677 0.0061688850926519085 0.03900151698643302 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 23114 16339 EVISKLYAV True PC9_epitope_Rep5 1020.5855472874398 1020.58444993586 67.845 2 0.03399687834759839 0.0061688850926519085 0.03903732336125309 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 8000 17365 ATDIPCLLY True H1975_Epitope_Rep2 1007.4997690581499 1007.49917496793 72.088 1 0.0339942884821792 0.0061688850926519085 0.03903934612017092 ['ENSG00000135249|ENST00000257700|RINT1', 'ENST00000474123.1_1_7:105190513-105195680:+|nuORF'] 35784 13813 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 61.027 2 0.0339916526230301 0.0061688850926519085 0.03904140489408901 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 101348 21371 SLITDLQTI True PC9_epitope_Rep4 1002.5597264624199 1002.55862993586 90.372 2 0.03398883135194163 0.0061688850926519085 0.03904360859003017 ['ENSG00000168014|ENST00000334126|C2CD3'] 7270 15314 ARDFTVSAL True PC9_epitope_Rep5 978.5134449763399 978.51234993586 63.917 2 0.033988469368481884 0.0061688850926519085 0.03904389134319638 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 754 15899 AAVPGKTFVNI True PC9_epitope_Rep5 1115.63389446219 1115.63278993586 66.146 2 0.033986621981122504 0.0061688850926519085 0.039045334405143794 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 92996 5967 RPKPIITSV True PC9_epitope_Rep6 1009.62841515893 1009.62730993586 31.259 2 0.03398386874380991 0.006182343605656489 0.03904748514482196 ['ENSG00000168802|ENST00000448552|CHTF8'] 116581 20047 TTYPNTYIF True PC9_epitope_Rep4 1118.5284263341398 1118.52732993586 85.247 2 0.03397779967578602 0.006182343605656489 0.03905222646382609 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 6896 3595 AQIENSAAVQK True NCI_RA007_Epitope_Rep3 1157.6040508858898 1157.6029499358601 20.011 2 0.03397193458077547 0.006182343605656489 0.039056808904187765 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 95775 14591 RYIDRIHIF True PC9_epitope_Rep4 1231.68257599011 1231.68094490379 64.052 3 0.03394864691774602 0.006182343605656489 0.03907500828527903 ['ENSG00000174231|ENST00000304992|PRPF8'] 2275 7897 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.4390649679301 35.351 1 0.03393273310804716 0.006182343605656489 0.03908744917230073 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 140016 6485 YQDTPKQI True PC9_epitope_Rep3 991.4974605590298 991.49636993586 29.97 2 0.03392304065038531 0.006182343605656489 0.03909502808260086 ['ENSG00000048162|ENST00000614830|NOP16'] 25653 7239 FEQEMATA True NCI_RA007_Epitope_Rep5 925.3851332287298 925.38402993586 34.522 2 0.03392125594718922 0.006182343605656489 0.03909642374935636 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000428275.1_1_X:53172253-53172460:-|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 101818 23008 SLPEVLPIL True PC9_epitope_Rep2 979.5953836951498 979.59428993586 93.995 2 0.03391282427737668 0.006182343605656489 0.03910301803097949 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 31283 20701 GDIEQFLITG True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 84.452 2 0.03390771999585524 0.006182343605656489 0.03910701047730057 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 4905 24004 ALFGALFLA True PC9_epitope_Rep5 921.5323895157699 921.53184496793 97.314 1 0.03389853812535813 0.006182343605656489 0.039114193198292846 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 89583 6337 QYNPHVHQL True PC9_epitope_Rep5 1134.55704112382 1134.55594993586 29.35 2 0.03389095146414472 0.006182343605656489 0.03912012888762542 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 11857 14127 DHIAHIIEL True PC9_epitope_Rep6 1059.57129420563 1059.57018993586 66.211 2 0.033888763773300246 0.006182343605656489 0.03912184064785057 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 73582 5883 M[Oxidation]VVPAALK True NCI_RA007_Epitope_Rep5 843.4888108320699 843.48770993586 29.316 2 0.03388575294145754 0.006182343605656489 0.03912419658065661 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 114321 21876 TPQSIFIFA True PC9_epitope_Rep4 1022.5436824754598 1022.5431749679301 92.357 1 0.03387949083438038 0.006182343605656489 0.03912909698058217 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 63568 13654 LMDHTIPEV True PC9_epitope_Rep6 1053.51648175145 1053.5153899358602 64.3 2 0.03387857032746208 0.006182343605656489 0.039129817366010455 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 3416 12258 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5857749679299 52.174 1 0.03387519457650213 0.006182343605656489 0.03913245931427586 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 141557 5809 YTNKEMLKY True H1975_Epitope_Rep3 1188.58489566444 1188.58324490379 27.367 3 0.03387212498382482 0.006182343605656489 0.03913486178847526 ['ENSG00000047188|ENST00000161863|YTHDC2'] 9402 13629 AVTDKFLSA True PC9_epitope_Rep5 950.5072969667399 950.50618993586 57.446 2 0.03385771382622845 0.006182343605656489 0.03914614264662307 ['ENSG00000140575|ENST00000268182|IQGAP1'] 121293 5307 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44906993586 25.465 2 0.03385399123505208 0.006182343605656489 0.03914905709479622 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 1443 8337 AEEGFTQVT True H1975_Epitope_Rep2 980.4450906329998 980.44398993586 37.02 2 0.0338402074801582 0.006182343605656489 0.03915985013792514 ['ENSG00000115946|ENST00000263657|PNO1'] 35199 8628 GRADGYVL True PC9_epitope_Rep6 849.43446637965 849.43336993586 43.003 2 0.033832651359113355 0.006182343605656489 0.03916576786546209 ['ENSG00000142937|ENST00000396651|RPS8'] 53296 13933 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6750499358602 61.496 2 0.03382524723607137 0.006182343605656489 0.039171567298645335 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 3419 12401 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep3 1043.58627587973 1043.5857749679299 52.889 1 0.03380775327753647 0.006182343605656489 0.03918527273862646 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 120909 7520 VENPGGYVA True H1975_Epitope_Rep3 904.42904664604 904.4279499358599 33.906 2 0.03379706904224438 0.006182343605656489 0.03919364520744199 ['TFRC|p.Y211S|1|0.26|ENSG00000072274|chr3:196071451-196071451|T/G|missense_variant', 'ENSG00000072274|ENST00000360110|TFRC'] 29641 16758 FVIRNIVEA True PC9_epitope_Rep4 1059.6076797143498 1059.60658993586 72.426 2 0.033777206251571344 0.006182343605656489 0.039209214339531395 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 60542 15048 LHDPVSISV True PC9_epitope_Rep2 965.5181960036101 965.51708993586 63.141 2 0.03377250969653858 0.006182343605656489 0.03921289643659267 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 99119 14128 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 59.169 2 0.033752215810893174 0.006182343605656489 0.03922881025180199 ['ENSG00000132646|ENST00000379143|PCNA'] 32181 5448 GEVTNVTTA True H1975_Epitope_Rep2 890.4345259493 890.43397496793 25.982 1 0.03375169713816249 0.006182343605656489 0.039229217051104506 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 75724 18249 NLLAHFINA True PC9_epitope_Rep6 1011.55016483823 1011.54906993586 82.835 2 0.03374407489596776 0.006182343605656489 0.039235195656829217 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 71839 12529 M[Oxidation]ELITPISA True H1975_Epitope_Rep1 989.5103341222899 989.50978496793 53.236 1 0.033740431314662624 0.006182343605656489 0.03923805382436259 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 76888 9605 NRDLATPVM True PC9_epitope_Rep6 1015.51206507735 1015.51096993586 47.265 2 0.033737377333530966 0.006182343605656489 0.039240449624374514 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 86484 5528 QKSLSLSPG True NCI_RA007_Epitope_Rep5 915.5025459394699 915.50144993586 27.95 2 0.03373714754693383 0.006182343605656489 0.03924062989342138 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 89390 16561 QYAGKYVLF True PC9_epitope_Rep6 1087.57023157647 1087.56912993586 76.14 2 0.03371222384875482 0.006182343605656489 0.03926018692005576 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 38157 10996 HDGLTVAV True PC9_epitope_Rep5 810.42356734278 810.42246993586 47.285 2 0.033703262161012396 0.006182343605656489 0.03926722098865515 ['ADCK1|p.R171L|1|0.08|ENSG00000063761|chr14:77887179-77887179|G/T|missense_variant'] 48282 12491 IYQRDPLKL True PC9_epitope_Rep3 1144.6604435631998 1144.65880490379 53.071 3 0.03369374264625416 0.006182343605656489 0.039274694084717204 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 17559 10015 EHGPENIVM True PC9_epitope_Rep4 1024.46478053176 1024.4636899358602 46.186 2 0.03368436110746597 0.006182343605656489 0.039282060061680425 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 10297 4770 C[Carbamidomethyl]C[Carbamidomethyl]TESLVNR True NCI_RA007_Epitope_Rep5 1137.49067856863 1137.48958993586 25.032 2 0.03368088403093004 0.006182343605656489 0.03928479041282494 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 134055 9405 VYKDHQTITI True PC9_epitope_Rep1 1216.6451874218799 1216.6435349037902 41.035 3 0.033673065972733326 0.006182343605656489 0.03929093008658281 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 97468 11965 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 51.102 1 0.033672154490575736 0.006182343605656489 0.03929164594500015 ['ENSG00000135900|ENST00000258383|MRPL44'] 78350 15679 NYKKFYEAF True PC9_epitope_Rep1 1208.5866099165999 1208.58550993586 65.131 2 0.0336587265615614 0.006182343605656489 0.039302193249837636 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 142518 11102 YYINGKTGL True PC9_epitope_Rep4 1027.53384606775 1027.53274993586 50.48 2 0.03365157238224839 0.006182343605656489 0.03930781367364597 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 87486 16568 QQDYFPKAL True PC9_epitope_Rep5 1108.5553097883198 1108.5542099358602 68.733 2 0.03364430969731137 0.006182343605656489 0.03931352004759556 ['ENSG00000100401|ENST00000356244|RANGAP1'] 2815 7418 AEVDAAMAA True H1975_Epitope_Rep1 847.3745685450299 847.3740149679301 33.538 1 0.03362374842468358 0.006182343605656489 0.03932967913405664 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 7942 9249 ATASNLVKV True PC9_epitope_Rep1 901.5232813840499 901.52218993586 40.428 2 0.03361676715979509 0.006182343605656489 0.039335167002081686 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 126664 6140 VLNTNIDGR True PC9_epitope_Rep6 1000.53015766964 1000.52906993586 32.043 2 0.0336130071729618 0.006182343605656489 0.03933812294421214 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 14905 20926 DYATIFNNL True PC9_epitope_Rep6 1069.5080252427301 1069.5069299358602 93.266 2 0.0336055637115437 0.006182343605656489 0.03934397524082114 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 8836 8184 AVEHLDDLPG True NCI_RA007_Epitope_Rep3 1064.51383889916 1064.51274993586 39.318 2 0.03360438977542595 0.006182343605656489 0.03934489829669464 ['CON__P01966'] 96936 10614 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 51.646 2 0.033588194020151126 0.006182343605656489 0.039357634779384344 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 87763 8624 QRDEKVLEL True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 40.654 2 0.033579248830278206 0.006182343605656489 0.039364670873179 ['ENSG00000135968|ENST00000309863|GCC2'] 9767 20730 AYILDTLVF True NCI_RA007_Epitope_Rep5 1053.57464825057 1053.57354993586 86.711 2 0.0335791509061394 0.006182343605656489 0.039364747904179535 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 42170 4335 IDQEELNK True NCI_RA007_Epitope_Rep2 987.48728979815 987.48618993586 21.499 2 0.03357058943613086 0.006182343605656489 0.0393714831958533 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 98242 14957 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48597496793 62.684 1 0.033549960849630744 0.006182343605656489 0.0393877157320431 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 38109 10866 HAYIISSL True NCI_RA007_Epitope_Rep4 902.4861675993401 902.48506993586 48.646 2 0.03354648404983021 0.006182343605656489 0.03939045217542176 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 28897 14784 FTDGDAALEF True H1975_Epitope_Rep2 1084.4713053808398 1084.4707749679299 62.025 1 0.03354560520401923 0.006182343605656489 0.03939114390398351 ['ENSG00000173545|ENST00000308683|ZNF622'] 104333 6914 SQIQEFKEA True PC9_epitope_Rep6 1078.5294889632999 1078.52838993586 35.519 2 0.03353800237075468 0.006182343605656489 0.0393971284348184 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 96070 13333 RYLTVAAVF True NCI_RA007_Epitope_Rep5 1038.5862159937797 1038.5851099358601 57.971 2 0.03352006359204583 0.006182343605656489 0.03941125194788577 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 43946 12987 IIDNSQGF True PC9_epitope_Rep2 892.4290466460399 892.4279499358599 55.242 2 0.0334977017582381 0.006182343605656489 0.03942886390050647 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 139794 8502 YPIEHGIITN True NCI_RA007_Epitope_Rep1 1155.5924235730297 1155.5913299358601 37.071 2 0.033489249700035785 0.006182343605656489 0.039435522416152974 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 76947 5323 NRDRTQIAL True PC9_epitope_Rep6 1085.59415490853 1085.59304993586 28.307 2 0.033483380540632234 0.006182343605656489 0.03944014669726723 ['ENSG00000241685|ENST00000262942|ARPC1A'] 111327 11578 THNIIVNQL True PC9_epitope_Rep6 1050.5821932425 1050.58108993586 55.645 2 0.03346960976108159 0.006182343605656489 0.03945099845391944 ['ENSG00000198356|ENST00000357332|GET3'] 107851 9224 SVVGPVKGV True PC9_epitope_Rep3 840.5069030439199 840.50580993586 40.419 2 0.03346628095439288 0.006182343605656489 0.03945362203095883 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 37588 13004 GVVPTIQKV True PC9_epitope_Rep1 939.5753169569098 939.57420993586 54.891 2 0.033426198303727755 0.006182343605656489 0.03948522467776699 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 117857 20393 TVYPGLMITA True PC9_epitope_Rep4 1064.55761828744 1064.55652993586 86.588 2 0.03342137204389845 0.006182343605656489 0.03948903134619038 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 60564 14447 LHFFM[Oxidation]PGFAP True H1975_Epitope_Rep3 1178.5582873742198 1178.5571899358602 60.927 2 0.0333713938413003 0.006182343605656489 0.03952846973548012 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000416519.1_1_7:55713940-55714147:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 24162 19912 EYQELMNVKL True PC9_epitope_Rep1 1265.6325741328499 1265.6314699358602 81.41 2 0.03336438475907485 0.006182343605656489 0.03953400338895538 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 36277 15016 GVDVTLPRV True PC9_epitope_Rep6 954.5498304850599 954.54872993586 69.785 2 0.03335972107103784 0.006182343605656489 0.039537685728006235 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 73893 20542 NAVVELVTV True PC9_epitope_Rep2 942.5385970950199 942.5380449679301 84.447 1 0.033352238929703446 0.006182343605656489 0.03954359406729625 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 111257 19616 THLESLVEL True PC9_epitope_Rep1 1039.5549754351498 1039.5538699358601 80.28 2 0.033343313402955224 0.006182343605656489 0.0395506431804824 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 73090 10227 MRFGNEREL True PC9_epitope_Rep5 1150.5553268716599 1150.5536849037899 44.327 3 0.03333049920220334 0.006182343605656489 0.039560765338557215 ['ENSG00000121864|ENST00000496856|ZNF639'] 141706 12765 YTVENLIRI True NCI_RA007_Epitope_Rep3 1119.62880908175 1119.6277099358601 57.448 2 0.033305445173526724 0.006182343605656489 0.03958056237495857 ['LILRA6|p.M451I|1|0.41|ENSG00000244482|chr19:54239046-54239046|C/A|missense_variant', 'LILRA2|p.M453I|1|0.26|ENSG00000239998|chr19:54587253-54587253|G/T|missense_variant'] 32954 10288 GIDIFTGK True H1975_Epitope_Rep3 849.45961849833 849.45852993586 44.624 2 0.03329559797466749 0.00620558976788252 0.03958834570191638 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 4327 20307 AIISELVSI True PC9_epitope_Rep6 943.5589981864299 943.55790993586 90.818 2 0.03328818886940755 0.00620558976788252 0.03959420280113511 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 72807 17689 MPFGNVVSA True PC9_epitope_Rep6 920.4425885351999 920.44203496793 80.675 1 0.03328484853113284 0.00620558976788252 0.03959684367274478 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 124819 9958 VHGPPVQL True PC9_epitope_Rep4 845.47593726881 845.47484993586 45.96 2 0.033222846294003155 0.006227357753415576 0.0396458901102349 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 32592 13035 GGHGPSFPL True PC9_epitope_Rep2 867.42390169595 867.42280993586 55.419 2 0.03321705981915172 0.006227357753415576 0.03965047012081897 ['ENSG00000079246|ENST00000392132|XRCC5'] 14129 17479 DSDFFTSYY True H1975_Epitope_Rep3 1143.43967089939 1143.4390749679299 72.949 1 0.03321411296019926 0.006227357753415576 0.03965280274226489 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant'] 103017 21061 SPFPLEAV True PC9_epitope_Rep1 858.44871946146 858.4481749679301 85.841 1 0.033173999134099144 0.006227357753415576 0.03968456703996805 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 129085 9665 VQPSKYHFL True PC9_epitope_Rep4 1117.5920296502102 1117.59092993586 44.804 2 0.03316382469853915 0.006227357753415576 0.03969262718049901 ['ENSG00000177383|ENST00000317897|MAGEF1'] 38216 7359 HEAFNRLLE True H1975_Epitope_Rep3 1127.5723568347898 1127.5712499358601 33.282 2 0.03313923632646002 0.006227357753415576 0.039712111776484656 ['ENSG00000136206|ENST00000693451|SPDYE1', 'nc|ENSG00000136206|Q8NFV5|SPDYE1', 'nc|ENSG00000205482|P0DV79|SPDYE18', 'ENSG00000205238|ENST00000691607|SPDYE2', 'ENSG00000173678|ENST00000507450|SPDYE2B', 'nc|ENSG00000205238|Q495Y8-2|SPDYE2', 'ENSG00000185040|ENST00000633306|SPDYE16', 'SPDYE5|p.M345*|1|0.09|ENSG00000170092|chr7:75501637-75501637|C/-|frameshift_variant', 'ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000260097|ENST00000563237|SPDYE6', 'nc|ENSG00000179994|Q495Y7|SPDYE7P'] 114260 10859 TPNRATFVV True PC9_epitope_Rep2 1003.5450794577899 1003.5439899358599 47.087 2 0.0331391431981529 0.006227357753415576 0.03971218558987571 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 117836 20114 TVYEGFISA True PC9_epitope_Rep1 985.4756624852898 985.47456993586 82.198 2 0.033133418658100426 0.006227357753415576 0.03971672307997318 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 43945 13483 IIDNSQGF True PC9_epitope_Rep1 892.4290466460399 892.4279499358599 56.719 2 0.03311909520051838 0.006227357753415576 0.03972807835187567 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 104529 10565 SQPEKVYTL True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 45.529 2 0.03311264569056602 0.006227357753415576 0.03973319226869878 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 138726 19921 YIPTELDQV True PC9_epitope_Rep5 1076.53899101784 1076.5378899358602 81.681 2 0.03310794205938422 0.006227357753415576 0.03973692220735575 ['ENSG00000149100|ENST00000531120|EIF3M'] 107930 22540 SVVTSIFGV True PC9_epitope_Rep1 907.5014833103099 907.5009349679301 91.502 1 0.033104913185611116 0.006227357753415576 0.039739324237011105 ['ENSG00000196305|ENST00000443024|IARS1'] 103493 7427 SPQQPGLSA True PC9_epitope_Rep2 883.4399456829099 883.4393949679301 33.944 1 0.03309696768020405 0.006227357753415576 0.03974562596331317 ['ENSG00000170498|ENST00000367194|KISS1'] 7976 10217 ATDDVAQIY True H1975_Epitope_Rep2 994.46074069714 994.4596499358599 44.304 2 0.03308418857305206 0.006248964423509361 0.0397557631070119 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 32043 13018 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.49187496793 55.31 1 0.033075546248569024 0.006248964423509361 0.03976261996772891 ['ENSG00000051523|ENST00000261623|CYBA'] 104484 10085 SQLSKLQEV True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 44.122 2 0.033072512401585374 0.006248964423509361 0.03976502727681546 ['ENST00000472011.5_1_1:235582749-235612074:+|nuORF', 'nc|ENSG00000285053|Q15813|TBCE', 'nc|ENSG00000285053|Q15813-2|TBCE'] 130233 21951 VSFGDFVQV True PC9_epitope_Rep2 996.4916469025999 996.49054993586 89.909 2 0.0330659847916955 0.006248964423509361 0.039770207255012555 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 25369 9136 FEADPPGQVAA True H1975_Epitope_Rep3 1100.51383889916 1100.51274993586 40.131 2 0.03305922985116649 0.006248964423509361 0.03977556824090104 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 45121 21301 IPLTLLPAA True PC9_epitope_Rep5 907.5742543277498 907.5737049679301 86.986 1 0.033052943236907335 0.006248964423509361 0.03978055810185387 ['ENSG00000116903|ENST00000366645|EXOC8'] 72513 22948 MLFPGSIAL True PC9_epitope_Rep1 947.51502519947 947.51392993586 93.07 2 0.03302707763475035 0.006248964423509361 0.03980109400370859 ['ENSG00000101367|ENST00000375571|MAPRE1'] 73352 10653 MTEKLYPGYY True H1975_Epitope_Rep2 1263.58456131127 1263.5834699358602 46.002 2 0.033025763506056044 0.006248964423509361 0.03980213759426155 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 5225 23216 ALPEIFTEL True PC9_epitope_Rep1 1031.55391280599 1031.55280993586 94.099 2 0.033022150994453804 0.006248964423509361 0.03980500652331225 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 90601 7994 REMGQFYEA True H1975_Epitope_Rep2 1129.4862442523297 1129.4851499358601 35.698 2 0.03300425381953823 0.006248964423509361 0.03981922244458842 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.L649Wfs*7|1|0.08|ENSG00000106608|chr7:43877517-43877517|A/-|frameshift_variant'] 24815 16476 FAVAPNQNL True PC9_epitope_Rep1 972.50288029264 972.50178993586 68.201 2 0.03300343480274335 0.006248964423509361 0.039819873102796284 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 27344 21623 FLSQDIITV True PC9_epitope_Rep1 1034.5648118428599 1034.56370993586 88.0 2 0.03299623044343359 0.006248964423509361 0.03982559691394864 ['nc|ENSG00000143839|P00797-2|REN', 'ENSG00000143839|ENST00000272190|REN'] 32785 14167 GHFDGVQDL True PC9_epitope_Rep5 986.4457593393399 986.44466993586 59.504 2 0.03299475619532579 0.006248964423509361 0.039826768280375416 ['nc|ENSG00000134759|Q6IA86-4|ELP2', 'nc|ENSG00000134759|Q6IA86-2|ELP2', 'nc|ENSG00000134759|Q6IA86-3|ELP2', 'nc|ENSG00000134759|Q6IA86-5|ELP2', 'ENSG00000134759|ENST00000358232|ELP2', 'nc|ENSG00000134759|Q6IA86-6|ELP2', 'nc|ENSG00000134759|Q6IA86-7|ELP2'] 9028 11724 AVHDSFVAV True PC9_epitope_Rep2 943.4763311916299 943.4752299358599 50.43 2 0.03298940158124212 0.006248964423509361 0.039831023047101254 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 23764 20580 EYGPIHILW True PC9_epitope_Rep4 1126.5811306133398 1126.58002993586 87.314 2 0.032983634579352966 0.0062696666430075475 0.03983560593266932 ['ENSG00000162627|ENST00000306121|SNX7', 'nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7'] 49851 7795 KIDEHHFVAV True PC9_epitope_Rep4 1193.6193070272102 1193.61766490379 37.383 3 0.032978228609171274 0.0062696666430075475 0.039839902326620824 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 78200 14677 NYENKQYLF True PC9_epitope_Rep2 1217.57168812845 1217.5705899358602 61.72 2 0.03296983073345714 0.0062696666430075475 0.03984657732557839 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 98054 10154 SEQPPNSVLP True H1975_Epitope_Rep2 1066.5294889633 1066.52838993586 44.056 2 0.032966952041891553 0.0062696666430075475 0.03984886565638687 ['nc|ENSG00000241839|Q8TD55-2|PLEKHO2', 'ENSG00000241839|ENST00000323544|PLEKHO2'] 105219 9793 SRIARALAL True PC9_epitope_Rep4 969.6083484206899 969.60724993586 45.311 2 0.03292775477513713 0.0062696666430075475 0.03988003558740637 ['ENSG00000142871|ENST00000451137|CCN1'] 21812 7032 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58624993586 36.049 2 0.0329153864209811 0.0062696666430075475 0.03988987532661006 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 2576 8446 [Acetylation]-AEQVALSR True H1975_Epitope_Rep3 914.4821451643598 914.48159496793 37.471 1 0.03291101227223515 0.0062696666430075475 0.03989335571277723 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 17263 15838 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50708496793 65.734 1 0.03288384848974501 0.0062696666430075475 0.03991497499712861 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 1729 5626 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 26.678 2 0.032873008603366574 0.0062696666430075475 0.03992360512018122 ['ENSG00000161847|ENST00000617231|RAVER1'] 44588 11458 ILQDRLNQV True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 49.393 2 0.03286979386610542 0.0062696666430075475 0.03992616482539915 ['ENSG00000094804|ENST00000209728|CDC6'] 14526 8906 DTNADKQLSF True NCI_RA007_Epitope_Rep5 1137.53021723929 1137.52912993586 40.918 2 0.03286666217536081 0.0062696666430075475 0.03992865854095494 ['ENSG00000163220|ENST00000368738|S100A9'] 97895 7608 SELVSNGV True H1975_Epitope_Rep2 803.40249754503 803.40140993586 34.217 2 0.03286366695787461 0.0062696666430075475 0.03993104371002071 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 103988 18259 SQATDFGEALV True PC9_epitope_Rep6 1136.5349682665599 1136.5338699358601 82.874 2 0.03285840612456257 0.0062696666430075475 0.03993523334335203 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 97952 10720 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.46472993586 46.261 2 0.03285790294238387 0.0062696666430075475 0.03993563408837445 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 142607 17463 YYLTPDGQRF True PC9_epitope_Rep5 1258.59823722946 1258.5971499358602 72.172 2 0.0328546702047006 0.0062696666430075475 0.03993820879190596 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 1 6207 AAAAAAAAAAA True PC9_epitope_Rep1 799.41881631551 799.41770993586 28.689 2 0.03285454760797924 0.0062696666430075475 0.0399383064364726 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 134567 20721 VYSEVAAYEF True PC9_epitope_Rep1 1176.5339056373998 1176.5333749679298 84.528 1 0.03283533882432727 0.0062696666430075475 0.03995360817928126 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 78657 11426 NYVEVTRKW True PC9_epitope_Rep1 1193.61930702721 1193.61766490379 48.828 3 0.03283514227352008 0.0062696666430075475 0.03995376477790444 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 132405 10688 VVAGVAAE True PC9_epitope_Rep3 714.39120458534 714.39065496793 46.057 1 0.03282928995939737 0.0062696666430075475 0.039958427754147555 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 136945 11266 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.3808149679301 48.215 1 0.03279936654283419 0.0062696666430075475 0.03998227727307658 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 73422 23265 MTVDDLLSL True PC9_epitope_Rep2 1005.5052483614099 1005.50414993586 94.972 2 0.032752484836265895 0.0063144451802100085 0.04001966741089115 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 98177 8337 SESVTEITA True H1975_Epitope_Rep3 935.44475627983 935.4442049679301 37.053 1 0.032751607687577816 0.0063144451802100085 0.04002036725962196 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 2264 7757 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.4390649679301 34.795 1 0.032750890567737806 0.0063144451802100085 0.04002093943427885 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 97242 5782 SEAATPPVA True H1975_Epitope_Rep3 841.4181476091699 841.4175949679301 27.267 1 0.03274287034387345 0.0063144451802100085 0.040027339078159495 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 101280 23808 SLIEDLILL True PC9_epitope_Rep4 1027.6165130625498 1027.61540993586 99.996 2 0.032733018491929715 0.0063144451802100085 0.04003520144928736 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'SMYD3|p.H408N|1|0.17|ENSG00000185420|chr1:245749628-245749628|G/T|missense_variant', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 48990 8425 KEFIKIVEA True NCI_RA007_Epitope_Rep4 1075.62774645259 1075.62664993586 39.221 2 0.03271994937900273 0.0063144451802100085 0.04004563343201031 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 97328 2856 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41302993586 14.596 2 0.032709617314957445 0.0063144451802100085 0.040053882306579025 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 110342 5551 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.4390649679301 26.397 1 0.03270116008108993 0.0063144451802100085 0.040060635445592706 ['ENSG00000167470|ENST00000682408|MIDN'] 111402 9194 THSLETQEL True PC9_epitope_Rep3 1056.5087535187201 1056.5076499358602 40.302 2 0.03268585765419317 0.0063144451802100085 0.040072856983133884 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 54862 20693 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61157496793 87.757 1 0.03268488256372534 0.0063144451802100085 0.04007363586367261 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 47356 13843 IVGPDGLVY True H1975_Epitope_Rep2 931.50148331031 931.5009349679301 58.394 1 0.03267781020624786 0.0063144451802100085 0.04007928549373526 ['ENSG00000105202|ENST00000221801|FBL'] 1159 7996 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 35.707 1 0.032667500412251235 0.0063144451802100085 0.040087522517135536 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 103826 17413 SPYHGFTIV True PC9_epitope_Rep5 1019.5076313199099 1019.50652993586 71.98 2 0.032661099010105554 0.0063144451802100085 0.0400926376560826 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 96463 12590 SAAMPGASL True PC9_epitope_Rep4 803.38473930591 803.38364993586 56.257 2 0.03265144776446276 0.0063144451802100085 0.04010035069033112 ['ENSG00000086062|ENST00000379731|B4GALT1'] 14113 4726 DSAPSPPPP True H1975_Epitope_Rep3 863.40249754503 863.40140993586 23.305 2 0.03264187551057483 0.0063144451802100085 0.04010800185286749 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 32350 17046 GFGFVTYA True NCI_RA007_Epitope_Rep4 860.4068546494799 860.40630496793 73.856 1 0.03263223502236434 0.0063144451802100085 0.04011570882044066 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000484852.1_1_3:147884522-147885023:-|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000452488.1_1_2:41383770-41384067:+|nuORF', 'chr12:54281945-54282090|539|20.38|0.0|20.96|+|ENST00000550994|HNRNPA1,HNRNPA1', 'ENST00000441603.1_1_11:5593122-5593311:-|nuORF', 'chr12:54281908-54283827|540|40.78|0.0|21.96|+|ENST00000678448|HNRNPA1,HNRNPA1', 'ENST00000560782.2_1_15:54613573-54613741:-|nuORF', 'chr12:54281896-54283827|541|156.5|0.0|23.9|+|ENST00000679273|HNRNPA1,HNRNPA1', 'chr12:54281941-54282052|538|31.53|0.0|21.59|+|ENST00000676842|HNRNPA1,HNRNPA1', 'ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 133904 15393 VYIDQTMVL True NCI_RA007_Epitope_Rep4 1080.5525329069999 1080.5514299358601 66.883 2 0.03262999833598722 0.0063144451802100085 0.040117497092792866 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 121988 23104 VFTYVGALF True PC9_epitope_Rep3 1015.5378688190298 1015.53676993586 94.138 2 0.032612136404490843 0.006337795014898548 0.0401317804913781 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 103270 12349 SPLLLQAKA True PC9_epitope_Rep3 939.5753169569099 939.57420993586 52.529 2 0.03259979216255065 0.006337795014898548 0.04014165418432431 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 105271 20604 SRLGLPLLL True PC9_epitope_Rep4 980.63825156664 980.63714993586 87.407 2 0.032592768091357825 0.006359338061465721 0.04014727340312633 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 24069 18778 EYNSDLHQFF True PC9_epitope_Rep4 1298.5567663402996 1298.5556699358601 80.313 2 0.032589116705573344 0.006359338061465721 0.040150194758276046 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 55108 6275 LAAARLAAA True PC9_epitope_Rep6 826.5024863698198 826.50138993586 32.643 2 0.032581875995014206 0.006359338061465721 0.04015598835451708 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 76794 15760 NRAISVIL True PC9_epitope_Rep5 884.5443511817999 884.54324993586 65.615 2 0.032577165908712194 0.006359338061465721 0.040159757476818915 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1'] 109617 4281 TEAGAGAVAA True H1975_Epitope_Rep3 816.3977465177599 816.3971949679301 21.583 1 0.03256443260282088 0.006359338061465721 0.04016994848698448 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 90106 6649 REAQSFISA True NCI_RA007_Epitope_Rep3 1007.5036085686298 1007.50250993586 33.223 2 0.03256334214709631 0.006359338061465721 0.040170821328447216 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 103276 10503 SPLLLQAKA True PC9_epitope_Rep6 939.5753169569099 939.57420993586 51.182 2 0.032562194664292304 0.006359338061465721 0.04017173983406647 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 72317 22658 MIIPSLEEL True PC9_epitope_Rep2 1043.5572839342701 1043.5561899358602 92.651 2 0.032552952012190155 0.006359338061465721 0.04017913879563852 ['ENST00000558123.5_1_15:41625155-41634596:+|nuORF', 'nc|ENSG00000137804|Q9BXS6-7|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-4|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-6|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-3|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-5|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-2|NUSAP1', 'ENSG00000137804|ENST00000559596|NUSAP1'] 5291 10324 ALQEMVHQV True PC9_epitope_Rep6 1053.52771514149 1053.52660993586 50.411 2 0.0325521529756448 0.006359338061465721 0.04017977849813912 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 46953 17924 ITPENLPQI True PC9_epitope_Rep6 1023.5600608155898 1023.5589699358601 81.571 2 0.03254743108813256 0.006359338061465721 0.040183558983115965 ['ENSG00000015479|ENST00000394805|MATR3'] 12081 19094 DHTVGVLF True PC9_epitope_Rep5 886.45486747106 886.45376993586 78.475 2 0.0325473997359903 0.006359338061465721 0.04018358408560163 ['ENSG00000145632|ENST00000274289|PLK2'] 119868 8057 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep1 964.4688036634799 964.46770993586 35.336 2 0.03254394470261118 0.006359338061465721 0.04018635048373657 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 104802 23132 SQYPEIIFL True PC9_epitope_Rep3 1108.580461907 1108.57987496793 94.244 1 0.03254080545847147 0.006359338061465721 0.0401888641752663 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 102858 12490 SPAAPVITA True PC9_epitope_Rep1 825.45961849833 825.45852993586 52.911 2 0.03252759678104126 0.006359338061465721 0.04019944225524619 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 36522 4999 GVGPVPARA True PC9_epitope_Rep4 822.47118624154 822.47008993586 25.846 2 0.03249029278558342 0.006382375189107413 0.04022932979465078 ['ENSG00000129636|ENST00000320640|ITFG1'] 39147 9403 HHYSGNNIEL True PC9_epitope_Rep3 1182.5417849825 1182.54013490379 41.105 3 0.032486708059874254 0.006382375189107413 0.040232202839001925 ['ENSG00000156482|ENST00000287038|RPL30'] 140010 5293 YQDTHPERL True PC9_epitope_Rep3 1157.5465360097699 1157.54488490379 25.437 3 0.03248346235642959 0.006382375189107413 0.04023480431940007 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 89189 6456 QVSPEAGVQKV True PC9_epitope_Rep4 1140.6138872935999 1140.61278993586 31.936 2 0.03248324363760945 0.006382375189107413 0.04023497963102658 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 48863 8432 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54806993586 37.385 2 0.03247444014673218 0.006389098453413806 0.040242036514228315 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 2853 13314 AEVEMVIPA True H1975_Epitope_Rep2 957.4841189940098 957.48302993586 56.343 2 0.03247432726307831 0.006389098453413806 0.04024212700871522 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000525040.5_1_11:9801967-9809483:-|nuORF'] 58977 10999 LEVDPNIQA True H1975_Epitope_Rep2 997.50802524273 997.50692993586 47.334 2 0.03247388451245603 0.006389098453413806 0.040242481946556545 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000433288.2_1_1:151922871-151923141:-|nuORF', 'ENST00000441609.1_1_6:162989483-162989972:+|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 29500 24224 FVFPGELLL True PC9_epitope_Rep1 1033.5848190114498 1033.58427496793 97.995 1 0.03246221857158031 0.006389098453413806 0.04025183509399743 ['ENSG00000105281|ENST00000542575|SLC1A5'] 120181 5144 VEAPPPSSP True H1975_Epitope_Rep2 879.43379767331 879.43270993586 24.863 2 0.03246160933842593 0.006389098453413806 0.04025232359677763 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 2723 11381 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 48.826 1 0.032460318123719446 0.006389098453413806 0.040253358951141814 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 142808 9929 YYSHLEGARF True PC9_epitope_Rep4 1241.5829215184897 1241.58127490379 45.842 3 0.03245936799857531 0.006389098453413806 0.04025412081903871 ['ENSG00000142207|ENST00000382751|URB1'] 16559 12294 EELSNVLAA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 52.372 2 0.032455277882660394 0.006389098453413806 0.04025740066283756 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 111178 7920 THGPPVQL True PC9_epitope_Rep6 847.45520182423 847.45410993586 39.895 2 0.03244175064879507 0.006389098453413806 0.04026824971614378 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 127061 4968 VLSSIEQK True PC9_epitope_Rep1 902.50729696674 902.50618993586 23.969 2 0.032434817832253875 0.006389098453413806 0.040273810914477216 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 29510 22061 FVFPGELLL True PC9_epitope_Rep6 1033.5848190114498 1033.58427496793 97.791 1 0.03243118026223882 0.006389098453413806 0.04027672907523517 ['ENSG00000105281|ENST00000542575|SLC1A5'] 73305 21109 MTEDGFLAV True PC9_epitope_Rep1 981.4477334852899 981.4471849679301 86.023 1 0.03243090444349176 0.006389098453413806 0.04027695035216467 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 73657 23051 MYIDPDLLAEL True PC9_epitope_Rep4 1291.6369908069498 1291.6358899358602 96.887 2 0.03242499377346231 0.006389098453413806 0.0402816924662471 ['ENSG00000104611|ENST00000265807|SH2D4A'] 91811 6571 RKIIATTL True NCI_RA007_Epitope_Rep4 914.59130137422 914.59020993586 31.893 2 0.03242068578603816 0.006389098453413806 0.04028514905394241 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 139079 15163 YLDDPTNSWY True H1975_Epitope_Rep3 1272.52988288612 1272.52878993586 63.726 2 0.032418950103634506 0.006389098453413806 0.04028654178035061 ['ENSG00000064195|ENST00000434704|DLX3'] 36083 21476 GVAETLVLV True PC9_epitope_Rep1 899.5327834385898 899.5322349679301 87.449 1 0.032405632028414934 0.006389098453413806 0.04029722969064611 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 33527 7162 GLDVEDVK True NCI_RA007_Epitope_Rep2 873.4443623570099 873.44326993586 32.48 2 0.032397896889080326 0.006389098453413806 0.040303438345139546 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 70300 17123 LVSDSALYF True H1975_Epitope_Rep1 1013.50696261357 1013.50637496793 71.3 1 0.03239082255795494 0.006389098453413806 0.04030911731561067 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 116783 12969 TVDSYVISY True H1975_Epitope_Rep2 1045.49679185269 1045.49627496793 55.0 1 0.032365906491472404 0.006389098453413806 0.04032912432797458 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 433 20002 AALPNVYEV True PC9_epitope_Rep1 974.5072969667399 974.5067449679301 81.765 1 0.03235997790130568 0.006389098453413806 0.04033388609850174 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 86238 18640 QILPTLVRL True PC9_epitope_Rep6 1051.67536535135 1051.6742699358601 84.342 2 0.03235643974215219 0.006389098453413806 0.040336728133808966 ['ENSG00000182481|ENST00000330459|KPNA2'] 111762 22259 TIITTLENL True PC9_epitope_Rep2 1016.57537652656 1016.57426993586 91.098 2 0.03235601298409469 0.006389098453413806 0.040337070939894255 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 139424 20493 YLPESSFIGA True PC9_epitope_Rep3 1082.52842633414 1082.52732993586 84.084 2 0.032353585887367885 0.006389098453413806 0.04033902062489177 ['ENSG00000188352|ENST00000338382|FOCAD'] 103309 8768 SPLSSHPVV True PC9_epitope_Rep2 921.49198125577 921.49088993586 39.083 2 0.03234760941271405 0.006389098453413806 0.0403438218666944 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 59084 16362 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46908993586 68.158 2 0.03234024196163859 0.006389098453413806 0.04034974123262778 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 31907 11029 GEMAGAFVA True H1975_Epitope_Rep2 851.3847393059099 851.3841949679301 47.452 1 0.03233843805445308 0.006389098453413806 0.040351190692144434 ['ENST00000451221.1_1_3:172321509-172321743:-|nuORF', 'ENSG00000136868|ENST00000374212|SLC31A1'] 53076 5122 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 24.79 2 0.0323352982473214 0.006389098453413806 0.040353713668530904 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 4493 14607 AIYDHINEGV True PC9_epitope_Rep1 1129.54038800017 1129.53928993586 61.01 2 0.03233345219089823 0.006389098453413806 0.04035519712106059 ['nc|ENSG00000184076|Q9UDW1-2|UQCR10'] 2750 4149 AETKPPM[Oxidation]AP True H1975_Epitope_Rep3 956.4637182830398 956.46262993586 21.08 2 0.032322426473895945 0.006389098453413806 0.04036405813057134 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 21223 7960 ERDPHEEIL True PC9_epitope_Rep3 1136.5462016566 1136.5445549037902 35.596 3 0.03231325034822007 0.006389098453413806 0.04037143395449353 ['ENSG00000153140|ENST00000283122|CETN3'] 103496 7938 SPQQPGLSA True PC9_epitope_Rep5 883.4399456829099 883.4393949679301 35.473 1 0.032287538167379705 0.006389098453413806 0.04039210770723577 ['ENSG00000170498|ENST00000367194|KISS1'] 53223 6867 KQFEKQVEL True PC9_epitope_Rep2 1147.6237237013097 1147.62208490379 31.816 3 0.03228662342992163 0.006389098453413806 0.040392843364408695 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 54456 14898 KYGIVQEFF True NCI_RA007_Epitope_Rep4 1129.58079626017 1129.5796899358602 64.768 2 0.03227697453951994 0.006389098453413806 0.040400603968043305 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-3|MTCL2'] 71528 20730 MAAAWPLLL True H1975_Epitope_Rep3 984.5466596809199 984.54556993586 86.62 2 0.03226625018419982 0.006389098453413806 0.040409231066736884 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 2729 11708 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 50.11 1 0.03224938046081684 0.006389098453413806 0.04042280493744611 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 49580 6074 KFTPVASKF True NCI_RA007_Epitope_Rep3 1023.5753169569099 1023.57420993586 30.874 2 0.03224798963149612 0.006389098453413806 0.040423924213452145 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX', 'ENST00000446634.1_1_7:143080130-143081191:+|nuORF'] 24707 21679 FAMEIDPSL True PC9_epitope_Rep5 1021.4790336135699 1021.47792993586 88.436 2 0.0322386996361337 0.006389098453413806 0.040431401058809976 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 43873 6285 IHSSSTVL True PC9_epitope_Rep5 842.44978209062 842.44868993586 29.152 2 0.03223327761305388 0.006389098453413806 0.04043576540035829 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 1046 8362 AEAEPPSEVV True H1975_Epitope_Rep3 1026.48695544498 1026.4858499358602 37.147 2 0.03222929977995055 0.006389098453413806 0.04043896752863683 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 61143 8287 LIIYSRNQ True NCI_RA007_Epitope_Rep5 1005.5607295219299 1005.55962993586 38.553 2 0.032220993552220016 0.006389098453413806 0.040445654685003586 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 29508 24160 FVFPGELLL True PC9_epitope_Rep5 1033.5848190114498 1033.58427496793 97.917 1 0.032194233885641854 0.006389098453413806 0.04046720472853291 ['ENSG00000105281|ENST00000542575|SLC1A5'] 108461 11271 SYLTSASSL True NCI_RA007_Epitope_Rep3 927.45492704071 927.45382993586 51.449 2 0.032180815830719876 0.006389098453413806 0.04047801423167044 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 8669 18238 AVAGATSLVTL True PC9_epitope_Rep6 1001.57571087973 1001.5746099358599 82.794 2 0.03217882779425903 0.006389098453413806 0.040479615991992936 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 90207 3431 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 18.049 2 0.03217715504716286 0.006389098453413806 0.04048096376582404 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 13932 12280 DRAGSIVL True PC9_epitope_Rep3 829.46576650793 829.46466993586 52.263 2 0.03217696460732417 0.006389098453413806 0.04048111721036269 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 91051 20110 RFLDDLGLKF True PC9_epitope_Rep4 1222.6710082468996 1222.66990993586 85.487 2 0.032172453941770075 0.006389098453413806 0.04048475176880762 ['ENSG00000046604|ENST00000261590|DSG2'] 41528 19832 HYPPVQVLF True PC9_epitope_Rep2 1098.58621599378 1098.5851099358601 81.676 2 0.03214823305386556 0.006389098453413806 0.04050427300974833 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 133348 5335 VVVDVSHED True NCI_RA007_Epitope_Rep3 997.47163973401 997.47054993586 27.993 2 0.032141671391124116 0.006389098453413806 0.040509562881904826 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 34770 10215 GQFTGSTGV True PC9_epitope_Rep1 852.3977465177599 852.39664993586 44.172 2 0.03213870616264292 0.006389098453413806 0.0405119535797333 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 102937 13914 SPDSGVYEM True PC9_epitope_Rep5 983.3906125319901 983.38950993586 58.54 2 0.03211403548162912 0.006389098453413806 0.040531848853565006 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 84394 13046 QAALEFHGV True PC9_epitope_Rep4 970.4872302284999 970.48612993586 58.074 2 0.032114024839050785 0.006389098453413806 0.04053185743790589 ['ENSG00000187231|ENST00000428443|SESTD1'] 107398 18924 SVLNELPSA True PC9_epitope_Rep2 928.48656152216 928.48601496793 78.155 1 0.032103147357750474 0.006389098453413806 0.04054063206618082 ['nc|ENSG00000167608|Q7Z404|TMC4', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 32236 7083 GEYISKDGVP True H1975_Epitope_Rep3 1063.51858992643 1063.51748993586 32.212 2 0.032095665087443326 0.006389098453413806 0.04054666879543286 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 90551 4925 REMEEAPVA True H1975_Epitope_Rep3 1030.4753452154598 1030.4742499358601 24.07 2 0.032095087980602725 0.006389098453413806 0.04054713443978691 ['ENSG00000102302|ENST00000375135|FGD1'] 142012 22319 YVLDDLIVA True PC9_epitope_Rep2 1019.5539128059899 1019.55280993586 91.332 2 0.03208392713864728 0.006389098453413806 0.04055614057577937 ['ENSG00000180104|ENST00000512944|EXOC3'] 21144 8395 ERAQGVVL True PC9_epitope_Rep1 870.4923156089399 870.49120993586 37.129 2 0.03201205195319676 0.006389098453413806 0.04061418061216638 ['ENSG00000136950|ENST00000353214|ARPC5L'] 54307 19641 KYAMMFAEL True PC9_epitope_Rep4 1102.51912460374 1102.51802993586 83.667 2 0.0319859039919562 0.006389098453413806 0.040635313020702134 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 56121 15525 LAVDAVIAELK True NCI_RA007_Epitope_Rep1 1140.675424921 1140.6743299358602 64.473 2 0.03197246595562921 0.006389098453413806 0.04064617711017764 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 104520 12497 SQNKNIEVL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 53.068 2 0.031971030207248397 0.006389098453413806 0.04064733799957727 ['OR4P4|p.V299Cfs*8|1|0.41|ENSG00000181927|chr11:55639252-55639252|G/-|frameshift_variant', 'ENSG00000181927|ENST00000641760|OR4P4'] 42409 5850 IEDINDHTP True H1975_Epitope_Rep3 1052.4774533904401 1052.47634993586 27.515 2 0.031960876037550295 0.006389098453413806 0.04065554906994527 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 92993 9185 RPKPIITSV True PC9_epitope_Rep3 1009.62841515893 1009.62730993586 40.269 2 0.03195206409295114 0.006389098453413806 0.040662675913520845 ['ENSG00000168802|ENST00000448552|CHTF8'] 6488 7157 APSPATAAATA True PC9_epitope_Rep5 927.4661604307499 927.46506993586 32.499 2 0.03194117782363569 0.006389098453413806 0.04067148188667923 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 12548 11011 DKNSGVVITV True PC9_epitope_Rep1 1030.56587447202 1030.56476993586 47.242 2 0.031934254347621836 0.006389098453413806 0.04067708317986405 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26'] 55256 17600 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.4992249679301 73.013 1 0.03192924699265084 0.006389098453413806 0.04068113468684071 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 86563 10959 QLDTHMELY True H1975_Epitope_Rep2 1148.51721002744 1148.5161099358602 47.185 2 0.031926244962158463 0.006389098453413806 0.040683563828900836 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 6852 16623 AQGGVLPNI True PC9_epitope_Rep6 867.48141657207 867.48030993586 76.405 2 0.031916753996017136 0.006389098453413806 0.04069124441589535 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 29538 9330 FVHPGAATV True PC9_epitope_Rep1 897.4708518883699 897.46974993586 40.744 2 0.03190550331269408 0.006389098453413806 0.040700350665412166 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 57426 14930 LEATINELV True NCI_RA007_Epitope_Rep1 1000.5440763982799 1000.54357496793 62.136 1 0.03189802623699688 0.006389098453413806 0.04070640353940271 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 76837 8277 NRAVVGVVA True PC9_epitope_Rep1 883.5239500903898 883.52284993586 36.67 2 0.031892980443979216 0.006389098453413806 0.04071048866641791 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 138397 5325 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 25.871 2 0.03189028300853844 0.006389098453413806 0.04071267268236821 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 40703 6220 HRSDALQL True PC9_epitope_Rep2 938.4933782380999 938.49228993586 29.324 2 0.03188761728460339 0.006389098453413806 0.040714831121153434 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 17485 5458 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 26.39 3 0.03188447201684929 0.006389098453413806 0.04071737797287058 ['ENSG00000162378|ENST00000294353|ZYG11B'] 42594 4044 IEGDNENKLPR True H1975_Epitope_Rep3 1283.64697832703 1283.64532490379 20.685 3 0.03188242528166841 0.006389098453413806 0.040719035371126804 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF'] 137857 9074 YESSTASALVA True H1975_Epitope_Rep1 1097.52406922969 1097.52347496793 39.808 1 0.03186395006387334 0.006389098453413806 0.040733998782653734 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 23836 16422 EYIKFLRSI True PC9_epitope_Rep6 1167.6651945904698 1167.66355490379 75.571 3 0.03186308291370162 0.006389098453413806 0.0407347012187705 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 45478 23676 IQLTALWPIAA True PC9_epitope_Rep1 1195.69649471875 1195.69538993586 95.861 2 0.03185902632832591 0.006389098453413806 0.040737987398643705 ['ENST00000525647.1_1_11:118133556-118134958:-|nuORF', 'ENST00000527282.1_1_11:118133507-118134958:-|nuORF', 'ENSG00000149573|ENST00000278937|MPZL2', 'ENST00000529376.5_1_11:118130767-118134958:-|nuORF'] 1089 9355 AEAIRILAA True NCI_RA007_Epitope_Rep3 926.5549158654999 926.55380993586 43.889 2 0.031848126796505435 0.006389098453413806 0.040746818071818326 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 28061 19917 FQSSAVMAL True PC9_epitope_Rep1 952.4688032830398 952.4682549679301 81.429 1 0.03184746838912975 0.006389098453413806 0.04074735155822198 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 90190 3573 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 18.644 2 0.03183170630793441 0.006389098453413806 0.04076012485174796 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 138717 23481 YIPSYFDFV True PC9_epitope_Rep1 1149.53826274185 1149.5371699358602 95.105 2 0.03182610852880826 0.006389098453413806 0.04076466201071589 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 2104 6479 AELGLTRAA True H1975_Epitope_Rep2 900.5028802926399 900.50178993586 29.839 2 0.031823694181378474 0.006389098453413806 0.04076661904124411 ['ENSG00000148331|ENST00000277458|ASB6', 'ASB6|p.Q233Rfs*2|1|0.18|ENSG00000148331|chr9:129638359-129638359|G/-|frameshift_variant', 'nc|ENSG00000148331|Q9NWX5-2|ASB6'] 76138 9111 NMVAKVDEV True PC9_epitope_Rep4 1003.5008316873099 1003.49972993586 42.631 2 0.03182282209411643 0.006389098453413806 0.04076732596067181 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 137122 6398 YASSANLHLPK True NCI_RA007_Epitope_Rep5 1199.62987171091 1199.62822490379 31.281 3 0.03181609127387064 0.006389098453413806 0.04077278235879557 ['CON__P34955'] 82430 11794 PPPLPPPPP True PC9_epitope_Rep2 907.51673945163 907.51564993586 50.697 2 0.03181598303436246 0.006389098453413806 0.04077287010920084 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'ENSG00000135723|ENST00000258201|FHOD1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000090470|ENST00000204549|PDCD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 117843 19093 TVYEGFISA True PC9_epitope_Rep4 985.4756624852898 985.47511496793 81.532 1 0.031798512148449504 0.006389098453413806 0.040787035976894856 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 4644 21706 ALADDDFLTV True PC9_epitope_Rep2 1078.5182555732601 1078.51714993586 88.969 2 0.03179641837066891 0.006389098453413806 0.04078873395115091 ['ENSG00000104738|ENST00000649973|MCM4'] 104181 21038 SQFPGAITL True PC9_epitope_Rep3 932.4967322830399 932.49618496793 86.201 1 0.03179268161077596 0.006389098453413806 0.040791764471761846 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 109094 17026 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.57388993586 70.741 2 0.031764522955009554 0.006389098453413806 0.04081460739952129 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 107874 19107 SVVKVLTEL True PC9_epitope_Rep2 986.6011973515799 986.60010993586 78.866 2 0.03175549577579242 0.006389098453413806 0.04082193276388069 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 110149 8643 TENSFVVSS True H1975_Epitope_Rep3 968.445090633 968.44454496793 38.241 1 0.03175540304038879 0.006389098453413806 0.04082200802252814 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 43652 10897 IHDFQPHVI True PC9_epitope_Rep4 1104.5716285588 1104.5705299358601 49.681 2 0.031753650257605806 0.006389098453413806 0.040823430501174984 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 109155 21609 TAMDVVYAL True PC9_epitope_Rep3 981.4841189940099 981.48357496793 88.416 1 0.03173140916147281 0.006389098453413806 0.04084148404405301 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 117845 20046 TVYEGFISA True PC9_epitope_Rep5 985.4756624852898 985.47456993586 82.161 2 0.0317213441139135 0.006389098453413806 0.04084965628877523 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 61356 16825 LISQIVSSITA True NCI_RA007_Epitope_Rep2 1130.6546894764201 1130.65358993586 70.18 2 0.03171598657265676 0.006389098453413806 0.040854006877144675 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 103343 12087 SPNGQFVAP True PC9_epitope_Rep2 915.4450310633499 915.44392993586 51.801 2 0.03170833041478259 0.006389098453413806 0.040860224743657234 ['ENSG00000121741|ENST00000610343|ZMYM2'] 10157 9448 AYVHM[Oxidation]VTHF True PC9_epitope_Rep3 1119.5171508382302 1119.51604993586 41.283 2 0.03169632616390373 0.006389098453413806 0.040869975496667904 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 38419 14472 HENILGFIA True H1975_Epitope_Rep2 1012.5341804209199 1012.53308993586 60.824 2 0.03168584311195538 0.006389098453413806 0.04087849224549945 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'ENSG00000107779|ENST00000372037|BMPR1A', 'ENSG00000115170|ENST00000434821|ACVR1', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 77668 7827 NTIDPSHPM True PC9_epitope_Rep4 1010.4491304676201 1010.44802993586 37.514 2 0.031684812619001135 0.006389098453413806 0.04087932953110889 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 77690 23083 NTIPLFVQL True PC9_epitope_Rep1 1043.60153170475 1043.60097496793 93.591 1 0.03166528016649763 0.006389098453413806 0.04089520261375153 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 30139 23870 FYPALADLF True PC9_epitope_Rep1 1055.5327834385898 1055.5316899358602 96.619 2 0.03165118373789446 0.006389098453413806 0.0409066613761069 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 140785 7906 YSDKEFAGSY True H1975_Epitope_Rep3 1165.49276910141 1165.49166993586 35.384 2 0.03164576245101812 0.006389098453413806 0.04091106898484789 ['ENSG00000109436|ENST00000442267|TBC1D9', 'TBC1D9|p.G735Efs*4|1|0.16|ENSG00000109436|chr4:140657530-140657530|C/-|frameshift_variant', 'ENST00000514787.1_1_4:141591792-141598206:-|nuORF'] 86691 23170 QLIPIFTDV True PC9_epitope_Rep1 1044.58554728744 1044.5849749679298 93.918 1 0.03164349270400088 0.006389098453413806 0.04091291445269538 ['ENSG00000125484|ENST00000372146|GTF3C4'] 44777 20164 IMFVQEEAL True PC9_epitope_Rep6 1078.53688284286 1078.53578993586 90.235 2 0.03161502723569826 0.006389098453413806 0.040936064974459285 ['ENSG00000010322|ENST00000345716|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 140078 9210 YQLDQDHNV True PC9_epitope_Rep1 1130.49925146418 1130.49814993586 40.276 2 0.03161143183204212 0.006389098453413806 0.04093898985682247 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'ENST00000534794.1_1_11:77413524-77475723:-|nuORF'] 33386 19233 GLAAGGIVAV True PC9_epitope_Rep5 826.4912529797799 826.49070496793 79.02 1 0.03159508907053464 0.006389098453413806 0.04095228704319689 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 76842 19444 NRDDIGIIL True PC9_epitope_Rep3 1027.56620882519 1027.5651099358602 80.017 2 0.031579553081177596 0.006389098453413806 0.04096493122814065 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 90889 4576 REWEEAERQA True NCI_RA007_Epitope_Rep4 1302.59527710734 1302.5941899358602 24.007 2 0.03156879158773028 0.006389098453413806 0.04097369157863794 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 110087 8181 TELVEHITA True H1975_Epitope_Rep2 1011.52367530687 1011.52256993586 36.419 2 0.03155751600035645 0.006389098453413806 0.040982872143474645 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF'] 5036 8736 ALIVEPSR True PC9_epitope_Rep2 883.51271670035 883.51160993586 38.963 2 0.031546861237200165 0.006389098453413806 0.040991548850225525 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 2825 7777 AEVDAAMAA True NCI_RA007_Epitope_Rep2 847.3745685450299 847.3740149679301 34.879 1 0.03153364936004939 0.006389098453413806 0.04100231012387333 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 118144 21798 TYIPGTQITF True PC9_epitope_Rep5 1139.58627556343 1139.5857749679299 88.878 1 0.03151912450203533 0.006389098453413806 0.041014143627276484 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 18913 9804 ELEEDFIK True H1975_Epitope_Rep1 1021.4967918526899 1021.49568993586 42.639 2 0.03151730590295617 0.006389098453413806 0.041015625458300654 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 99839 18058 SILFVPTSAPR True PC9_epitope_Rep2 1186.6710082468999 1186.66990993586 74.763 2 0.03151285963562901 0.006410407485093446 0.04101924855887848 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 106579 10835 STNNWVLIK True NCI_RA007_Epitope_Rep5 1073.58694426977 1073.58584993586 48.312 2 0.031481919995923036 0.006410407485093446 0.04104446771570732 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 76557 3530 NQKDPGVLDR True NCI_RA007_Epitope_Rep5 1140.58873517492 1140.5870849037901 19.447 3 0.031476235990727984 0.006410407485093446 0.04104910223625152 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 35604 16387 GTASGFYTV True PC9_epitope_Rep5 901.4181476091701 901.41704993586 68.031 2 0.03146683173478341 0.006410407485093446 0.04105677108929114 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 2338 6833 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 31.202 2 0.03146404886042553 0.006410407485093446 0.041059040664115344 ['ENSG00000172301|ENST00000302362|COPRS'] 12058 17980 DHTAPLLL True PC9_epitope_Rep3 878.48616759934 878.48506993586 74.363 2 0.031461443434552115 0.006410407485093446 0.04106116561791866 ['ENSG00000188352|ENST00000338382|FOCAD'] 29638 17487 FVIRNIVEA True PC9_epitope_Rep2 1059.6076797143498 1059.60658993586 72.52 2 0.031435429223258295 0.006410407485093446 0.04108238764890239 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 108157 18256 SYFSGSHMF True PC9_epitope_Rep3 1061.4276667470501 1061.42656993586 75.431 2 0.031430292038903 0.006410407485093446 0.04108657960051696 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 18914 9980 ELEEDFIK True H1975_Epitope_Rep3 1021.4967918526899 1021.49568993586 43.424 2 0.031419767528246004 0.006410407485093446 0.04109516876167296 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 9588 20728 AYAENIALL True PC9_epitope_Rep2 976.5229470308799 976.52239496793 85.168 1 0.031416587241588426 0.006410407485093446 0.04109776452815229 ['ENSG00000196455|ENST00000356763|PIK3R4'] 60603 5576 LHHDDPEVL True PC9_epitope_Rep6 1073.51417325233 1073.5130699358601 29.493 2 0.031415626896222085 0.006410407485093446 0.04109854839457061 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 21124 8075 ERANGMEL True PC9_epitope_Rep3 918.4229157197799 918.42180993586 36.035 2 0.031403106775335456 0.006410407485093446 0.04110876891054235 ['nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'nc|ENSG00000164548|Q13595-2|TRA2A', 'ENST00000494255.5_1_7:23547037-23556014:-|nuORF'] 5253 18902 ALPPVLTTV True PC9_epitope_Rep6 909.55351888317 909.55242993586 85.353 2 0.03138860829253038 0.006410407485093446 0.04112060713126918 ['ENSG00000155506|ENST00000518297|LARP1'] 3881 12948 AHADPTELAL True PC9_epitope_Rep4 1036.5189242796 1036.5178299358602 57.693 2 0.031387023027558046 0.006410407485093446 0.04112190169969643 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 75910 9814 NLQYNISRNT True NCI_RA007_Epitope_Rep1 1221.61019889549 1221.60910993586 42.178 2 0.03135898103982612 0.006410407485093446 0.041144807270671484 ['ENST00000298105.7_1_13:103543811-103548031:+|nuORF', 'nc|ENSG00000250878|A6NDL7|METTL21EP'] 91698 5871 RKAGIFQSV True NCI_RA007_Epitope_Rep3 1004.57671393924 1004.57560993586 30.072 2 0.03134994884586946 0.006431701455967582 0.04115218736964692 ['ENSG00000164919|ENST00000520468|COX6C'] 103025 21163 SPFQFTVGP True PC9_epitope_Rep3 978.4810822188999 978.47998993586 86.69 2 0.031346953115196204 0.006431701455967582 0.0411546353955748 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 133620 13689 VYADQPHIF True PC9_epitope_Rep6 1088.52909504048 1088.5279899358602 64.44 2 0.03134377945318008 0.006431701455967582 0.041157228957675596 ['ENSG00000100439|ENST00000428304|ABHD4'] 72839 9175 MPNGDHIVSA True PC9_epitope_Rep5 1039.47567956863 1039.4745899358602 40.238 2 0.03134199792732337 0.006431701455967582 0.04115868490734973 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 117184 11369 TVLERVEGA True PC9_epitope_Rep3 972.5240096600398 972.52290993586 48.735 2 0.03133820256780964 0.006431701455967582 0.04116178680669196 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 128869 13510 VQDRFEVNV True PC9_epitope_Rep2 1104.55637241748 1104.55526993586 57.253 2 0.03132662950438422 0.006431701455967582 0.04117124655830337 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 1469 5632 AEEHLTVDA True H1975_Epitope_Rep2 983.45598966987 983.45488993586 26.663 2 0.03132632603230966 0.006431701455967582 0.04117149463952164 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 4088 7816 AHQQSIPAV True PC9_epitope_Rep1 949.4981292653698 949.49702993586 34.888 2 0.03129897231802114 0.006431701455967582 0.04119386089826989 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 105236 15570 SRIPFNQAL True PC9_epitope_Rep5 1044.5716285588 1044.5705299358601 64.899 2 0.03128969146649241 0.006431701455967582 0.041201451912463286 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 48118 20452 IYPATIASI True PC9_epitope_Rep1 947.53278343859 947.53168993586 83.478 2 0.031268711975887015 0.006431701455967582 0.04121861590715415 ['nc|ENSG00000205571|Q16637-4|SMN1', 'nc|ENSG00000205571|Q16637-2|SMN1', 'nc|ENSG00000205571|Q16637-3|SMN1', 'ENSG00000205571|ENST00000380743|SMN2', 'ENSG00000172062|ENST00000380707|SMN1'] 101499 21523 SLLDPVPEV True PC9_epitope_Rep1 967.52261267771 967.52150993586 87.621 2 0.03126705669866841 0.006431701455967582 0.04121997040253925 ['ENSG00000089154|ENST00000300648|GCN1'] 105241 5747 SRKESYSVY True PC9_epitope_Rep5 1117.5403880001697 1117.53928993586 27.099 2 0.03126521947853217 0.006431701455967582 0.04122147382436358 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000609585.1_1_1:149399050-149399179:-|nuORF', 'ENST00000412169.1_1_1:120906105-120906168:+|nuORF'] 113213 10960 TLQKEGVIGV True PC9_epitope_Rep2 1042.6022599807397 1042.60116993586 47.479 2 0.03126144566317814 0.006431701455967582 0.0412245621349098 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 87454 21288 QQADVVLVL True PC9_epitope_Rep1 983.5651461960299 983.56404993586 86.71 2 0.03125523774337555 0.006431701455967582 0.04122964283049055 ['nc|ENSG00000130762|Q5VV41-2|ARHGEF16', 'ENSG00000130762|ENST00000378378|ARHGEF16', 'ENST00000485984.1_1_1:3394688-3397148:+|nuORF'] 54454 16301 KYGIVQEF True PC9_epitope_Rep3 982.5123823471799 982.51128993586 67.838 2 0.03125139556900186 0.006431701455967582 0.04123278761692071 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-3|MTCL2'] 23165 17446 EVLDSFLDLAR True NCI_RA007_Epitope_Rep2 1276.66631678928 1276.66520993586 72.597 2 0.031240716875355293 0.006454804589036255 0.041241529111348436 ['ENSG00000105281|ENST00000542575|SLC1A5'] 110958 7343 THAGAHLDL True PC9_epitope_Rep3 933.4668291370899 933.4657299358599 33.254 2 0.03123793098379398 0.006454804589036255 0.041243809880576465 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 18787 11350 ELDENLEY True H1975_Epitope_Rep1 1023.43967089939 1023.43907496793 48.634 1 0.031227669031106926 0.006454804589036255 0.04125221212263663 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 141182 15715 YSVETVTLL True H1975_Epitope_Rep3 1023.5488274255499 1023.5482749679301 65.888 1 0.031215930578374428 0.006477904456798266 0.04126182508054281 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 110370 7849 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 35.169 1 0.031211194542744243 0.006477904456798266 0.04126570409859257 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 107063 9003 SVGKPLYL True H1975_Epitope_Rep2 875.5116540711899 875.51054993586 39.581 2 0.031202198990587595 0.006477904456798266 0.04127307270262855 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 75820 22423 NLPDEEIFQQL True PC9_epitope_Rep1 1344.6561460284 1344.65504993586 91.07 2 0.031165024715812617 0.006501154190417864 0.041303535505996344 ['ENSG00000169019|ENST00000381571|COMMD8'] 110104 3727 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 19.331 2 0.031157611875744715 0.006501154190417864 0.04130961232226199 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 93005 8664 RPKPSSSPVIF True PC9_epitope_Rep4 1213.68190728377 1213.68025490379 40.816 3 0.031149544956311354 0.006521176165925089 0.04131622620009081 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 118233 21270 TYLDNGVVF True PC9_epitope_Rep5 1026.5022115862998 1026.5016749679298 86.866 1 0.03113299796107179 0.006521176165925089 0.041329795523035444 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 9495 21363 AVVSILLLSV True PC9_epitope_Rep2 1012.65323292444 1012.65212993586 87.641 2 0.03112480514256369 0.006521176165925089 0.04133651543238375 ['ENSG00000198178|ENST00000360345|CLEC4C'] 1000 4483 AEAAPPTQEA True H1975_Epitope_Rep2 983.45598966987 983.45488993586 22.357 2 0.03112043654238149 0.006521176165925089 0.0413400990247612 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 90187 3355 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 17.622 2 0.031084993541261163 0.006521176165925089 0.04136918296803488 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 71833 5966 M[Oxidation]ELESKLNEA True H1975_Epitope_Rep2 1178.5489044589801 1178.5478099358602 27.931 2 0.031057916122844042 0.006521176165925089 0.041391414023058536 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF', 'ENST00000572915.6_1_17:2570288-2573571:+|nuORF'] 134422 14240 VYPLMKEYF True NCI_RA007_Epitope_Rep4 1188.5889184157197 1188.58782993586 62.055 2 0.031057495069218625 0.006521176165925089 0.04139175979630164 ['ENSG00000100109|ENST00000407690|TFIP11'] 106814 14754 SVALVIHNV True PC9_epitope_Rep3 950.5549158655001 950.55380993586 61.889 2 0.03104977802766356 0.006521176165925089 0.04139809754109239 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2'] 104729 17810 SQVEIKLSL True PC9_epitope_Rep4 1015.5913609438699 1015.59026993586 76.538 2 0.031045355378808138 0.006521176165925089 0.04140173008624488 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 94783 5245 RSNPYYIVK True NCI_RA007_Epitope_Rep3 1138.61349337078 1138.6118549037901 27.635 3 0.031043371736375457 0.006521176165925089 0.04140335944048844 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 69428 22133 LTYGTMVFV True PC9_epitope_Rep1 1029.5205045027299 1029.51997496793 89.947 1 0.03103460425365215 0.006521176165925089 0.041410561663914165 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000589744.1_1_17:73949530-73951667:-|nuORF'] 86256 20050 QIPVKWIGV True PC9_epitope_Rep1 1038.6226015024997 1038.62150993586 81.948 2 0.03102981127617039 0.006521176165925089 0.04141449940299309 ['ENSG00000035687|ENST00000366535|ADSS2'] 98205 7347 SETKIFTA True NCI_RA007_Epitope_Rep2 895.4650978015899 895.46400993586 33.201 2 0.03102694072739592 0.006521176165925089 0.04141685789638588 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 5095 16313 ALLGDLTKA True PC9_epitope_Rep3 900.52803241132 900.52692993586 67.884 2 0.03101568742357058 0.006521176165925089 0.04142610491483119 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 38948 10153 HHIGDRSLSL True PC9_epitope_Rep5 1133.59415490853 1133.5924949037899 44.04 3 0.031010145062198874 0.006521176165925089 0.04143065980896692 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 40247 6283 HQISQQTQL True PC9_epitope_Rep1 1081.55162139021 1081.5505299358601 28.98 2 0.03098618675078978 0.006521176165925089 0.041450354453368296 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1', 'RC3H1|p.G985E|1|0.06|ENSG00000135870|chr1:173946483-173946483|C/T|missense_variant'] 90862 9828 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 42.789 2 0.030986179099929744 0.006521176165925089 0.041450360743942954 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 105706 13054 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.45847496793 55.298 1 0.030981556255707796 0.006521176165925089 0.04145416181816316 ['ENSG00000115758|ENST00000234111|ODC1'] 101819 23017 SLPEVLPIL True PC9_epitope_Rep2 979.5953836951498 979.5948349679301 94.028 1 0.030980084414052887 0.006521176165925089 0.041455372083488415 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 140666 14069 YRTEFTTAL True PC9_epitope_Rep4 1100.55022440788 1100.54912993586 62.026 2 0.030979700663997918 0.006521176165925089 0.04145568763827663 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 71273 22381 LYPSIIQEF True PC9_epitope_Rep3 1108.580461907 1108.57936993586 91.366 2 0.03095131306944384 0.006521176165925089 0.04147903623089373 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 103702 5607 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 28.361 2 0.03095113192499095 0.006521176165925089 0.04147918525694175 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 1178 5991 AEAPSSPDV True H1975_Epitope_Rep3 871.39232678415 871.39122993586 28.057 2 0.030929855769939812 0.006521176165925089 0.04149669215395873 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 83978 12517 PVSIQGSSV True PC9_epitope_Rep2 872.46034677432 872.45924993586 53.454 2 0.030918073519831436 0.006537792201683834 0.04150638978798893 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'ENST00000572588.1_1_16:14341268-14341367:+|nuORF'] 71726 10338 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 44.773 2 0.030912481371579585 0.006537792201683834 0.04151099320262005 ['ENSG00000026025|ENST00000544301|VIM'] 98997 5734 SHDHGYTTL True PC9_epitope_Rep5 1029.45157299577 1029.4504699358602 27.049 2 0.03090890232928177 0.006537792201683834 0.041513939672178 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 5006 11779 ALIARVTNV True PC9_epitope_Rep4 955.58146496651 955.58036993586 53.074 2 0.030902862999039497 0.006537792201683834 0.041518911994334655 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 110366 7840 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 35.106 1 0.03089818008471208 0.006537792201683834 0.04152276789735325 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 84292 18807 PYRLIFEKF True PC9_epitope_Rep2 1211.6702799709099 1211.66863490379 77.712 3 0.03089623858990593 0.006537792201683834 0.04152436661021871 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 8326 4138 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 22.415 2 0.030896037733831275 0.006537792201683834 0.041524532007010645 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 108598 21964 SYPDLLPTF True PC9_epitope_Rep4 1051.52261267771 1051.52207496793 92.698 1 0.030892359444854082 0.006537792201683834 0.041527561027516986 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 6871 18185 AQIDGTLSTI True PC9_epitope_Rep2 1017.5342399905701 1017.5336749679301 75.256 1 0.03088651488385065 0.006537792201683834 0.041532374331193674 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 71718 10234 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42662993586 44.308 2 0.030876275770828285 0.006537792201683834 0.04154080792758818 ['ENSG00000026025|ENST00000544301|VIM'] 52868 10502 KPFGQVIST True PC9_epitope_Rep2 975.5389314481899 975.53782993586 45.717 2 0.03087448902097582 0.006537792201683834 0.04154227976021415 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 118755 20498 TYYRGFLTL True PC9_epitope_Rep5 1132.59169529704 1132.5905899358602 83.885 2 0.030860441651590017 0.006537792201683834 0.04155385281108202 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 120413 5620 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 26.616 2 0.03085357203198888 0.006537792201683834 0.04155951341034892 ['ENSG00000171316|ENST00000423902|CHD7'] 101456 19195 SLLAAALLY True H1975_Epitope_Rep2 933.55351888317 933.55297496793 79.672 1 0.03084055984181072 0.006537792201683834 0.04157023732080955 ['ENSG00000197136|ENST00000355703|PCNX3'] 9488 19691 AVVPGLLEV True PC9_epitope_Rep6 895.5378688190299 895.53676993586 88.398 2 0.030836805694862274 0.006537792201683834 0.04157333171508574 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 141745 19653 YTYEFDFSKV True PC9_epitope_Rep4 1297.5866694862498 1297.5855699358601 83.714 2 0.030830794930831074 0.006537792201683834 0.041578286558539145 ['ENSG00000126814|ENST00000261249|TRMT5'] 32112 13069 GETIFVTAP True H1975_Epitope_Rep3 933.48074786573 933.4801949679301 55.512 1 0.03083037905013646 0.006537792201683834 0.04157862939944293 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 139374 18709 YLMEVTHDL True PC9_epitope_Rep1 1119.52704643515 1119.5259499358601 76.753 2 0.030827394870695714 0.006537792201683834 0.04158108954779383 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 75382 16396 NITDKGIIAL True PC9_epitope_Rep6 1056.6179100448799 1056.6168099358601 75.457 2 0.030811327648554633 0.006537792201683834 0.04159433745125995 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 96947 6525 SAVTSVAKV True PC9_epitope_Rep2 860.4967322830399 860.49562993586 30.514 2 0.030809919715829186 0.006537792201683834 0.04159549850536563 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 32097 10175 GETEDTFIA True H1975_Epitope_Rep1 981.4291062156899 981.42855496793 44.078 1 0.030797362462360204 0.006537792201683834 0.04160585508904099 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 108796 18761 SYTSGLETL True PC9_epitope_Rep1 969.4654917244101 969.46438993586 76.952 2 0.03078425509719323 0.006537792201683834 0.04161666772379292 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 40386 17206 HQTIVVQLL True PC9_epitope_Rep6 1049.62332977849 1049.62222993586 78.772 2 0.03077909382138181 0.006537792201683834 0.041620926063510165 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 39213 11677 HIGDAVVI True PC9_epitope_Rep6 822.4599528515 822.45884993586 56.044 2 0.03077431244995847 0.006537792201683834 0.04162487129270858 ['ENSG00000132646|ENST00000379143|PCNA'] 46445 17318 ISTEVGITNV True PC9_epitope_Rep5 1031.54989005471 1031.54937496793 71.616 1 0.030770062834342905 0.006537792201683834 0.04162837802470958 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 32874 10633 GHSGAVMEL True PC9_epitope_Rep1 899.4171020633501 899.41600993586 45.792 2 0.030747835676758244 0.006537792201683834 0.04164672371682276 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40'] 97786 14251 SELAGLLSA True NCI_RA007_Epitope_Rep3 859.46509780159 859.46400993586 63.369 2 0.03073245616280948 0.006537792201683834 0.041659421587228906 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 24542 4413 FAGDDAPRA True NCI_RA007_Epitope_Rep3 918.4195445915 918.4184499358599 24.141 2 0.03069918200443019 0.006537792201683834 0.04168690521262617 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 9978 12460 AYPHNLMTF True NCI_RA007_Epitope_Rep2 1092.50625142092 1092.5051499358601 53.077 2 0.030694750385748072 0.006537792201683834 0.041690566786179155 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 88732 18048 QTIQDIVTV True PC9_epitope_Rep6 1015.5549754351499 1015.55386993586 82.053 2 0.03068332338769076 0.006537792201683834 0.04170000947666349 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B'] 34980 22271 GQSELTLLL True PC9_epitope_Rep3 972.54916177872 972.54861496793 90.95 1 0.030682449920936702 0.006537792201683834 0.04170073134025433 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 6900 14761 AQIEVVPSA True PC9_epitope_Rep1 912.4916469025999 912.49109496793 61.598 1 0.03067324150493584 0.006537792201683834 0.04170834214711063 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 136336 11535 WTDGSTLQY True H1975_Epitope_Rep2 1069.47163973401 1069.47107496793 49.429 1 0.03067069141582035 0.006537792201683834 0.04171045001939054 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 71443 18481 LYTGTVSSF True PC9_epitope_Rep1 973.47566248529 973.47456993586 75.878 2 0.0306696559248814 0.006537792201683834 0.04171130596939855 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 98962 6451 SHAQTVVL True PC9_epitope_Rep4 853.46576650793 853.46466993586 31.91 2 0.030659709300023884 0.006537792201683834 0.04171952873953539 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 105019 19226 SRDLSLLI True PC9_epitope_Rep2 915.5389314481899 915.53782993586 79.325 2 0.030656249295272272 0.006537792201683834 0.041722389413202984 ['ENSG00000242550|ENST00000238508|SERPINB10'] 35385 10741 GSDDGVLAY True H1975_Epitope_Rep2 895.3923267841499 895.39177496793 46.342 1 0.030650144562724146 0.006537792201683834 0.041727437111321056 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 90420 11546 REIFFPETA True NCI_RA007_Epitope_Rep5 1108.5553097883198 1108.5542099358602 51.061 2 0.03064147446697956 0.006537792201683834 0.0417346068752466 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF', 'PMM1|p.R249Q|1|0.16|ENSG00000100417|chr22:41577361-41577361|C/T|missense_variant'] 72456 12369 MKTILSNQTVD True PC9_epitope_Rep5 1248.63838778928 1248.63728993586 52.574 2 0.030626242080674975 0.006537792201683834 0.041747205891547526 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF'] 44960 23571 IPADIVFVL True PC9_epitope_Rep5 985.58481901145 985.58427496793 95.651 1 0.030616210075519443 0.006537792201683834 0.041755505338640114 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1', 'ENST00000429417.1_1_2:192746108-192746309:-|nuORF', 'nc|ENSG00000137094|O75953|DNAJB5', 'ENSG00000137094|ENST00000682809|DNAJB5', 'nc|ENSG00000137094|O75953-5|DNAJB5'] 115592 6349 TRTGSSFSV True PC9_epitope_Rep4 940.4614094034799 940.46030993586 31.497 2 0.030613452611987602 0.006537792201683834 0.04175778682631519 ['ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484975.5_1_20:44472824-44477348:-|nuORF', 'ENST00000493118.5_1_20:44472824-44485929:-|nuORF'] 2713 7267 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 32.888 1 0.030610837415275337 0.006537792201683834 0.04175995070260179 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 34729 5044 GQEDHYNNL True PC9_epitope_Rep6 1088.45230127176 1088.45120993586 27.032 2 0.030609409837208012 0.006537792201683834 0.04176113195517872 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 71524 20843 MAAAWPLLL True H1975_Epitope_Rep1 984.5466596809199 984.54556993586 86.616 2 0.030608317907645254 0.006537792201683834 0.041762035493906086 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 103015 8629 SPFPGHVGA True PC9_epitope_Rep4 867.42390169595 867.42280993586 40.677 2 0.030571737363338784 0.006537792201683834 0.041792314426099715 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 40107 12222 HPWETVTTAA True PC9_epitope_Rep5 1111.52982331647 1111.5287299358602 51.999 2 0.030564455325094515 0.006561155139571526 0.04179834424515209 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 140012 5340 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54542993586 25.553 2 0.030541034357723054 0.006582659394395336 0.04181774277406782 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 662 10222 AATKIINEV True PC9_epitope_Rep1 957.54949613189 957.54838993586 44.2 2 0.030540722487095842 0.006582659394395336 0.0418180011342027 ['ENST00000470900.1_1_3:51423580-51426517:+|nuORF', 'ENSG00000145050|ENST00000528157|MANF', 'ENST00000482262.1_1_3:51425158-51426517:+|nuORF', 'ENST00000446668.5_1_3:51424348-51426517:+|nuORF'] 5228 23108 ALPEIFTEL True PC9_epitope_Rep3 1031.55391280599 1031.55280993586 94.152 2 0.030537574018225353 0.006582659394395336 0.0418206094677456 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 1807 9658 AEHPIVIVC True NCI_RA007_Epitope_Rep3 979.5160878286299 979.51498993586 45.068 2 0.030508440066109588 0.006582659394395336 0.04184475192911191 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276Q|1|0.1|ENSG00000150990|chr12:124977403-124977403|C/G|missense_variant'] 6285 4904 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 23.961 2 0.03050144070019108 0.006582659394395336 0.041850553870933976 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 7943 8498 ATASNLVKV True PC9_epitope_Rep2 901.5232813840499 901.52218993586 38.052 2 0.030494720439858583 0.006582659394395336 0.04185612510091266 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 32931 10543 GIAGSLKTV True PC9_epitope_Rep5 844.5018176634801 844.50072993586 45.543 2 0.03049224499710339 0.006582659394395336 0.04185817745174429 ['ENSG00000008083|ENST00000341776|JARID2'] 107281 23608 SVLDGLLYV True PC9_epitope_Rep1 977.54334812229 977.54224993586 95.599 2 0.030491138004059226 0.006582659394395336 0.04185909527011095 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 9640 18652 AYDDKIYYF True PC9_epitope_Rep4 1196.5389910178399 1196.5378899358602 79.821 2 0.030476781107543816 0.006582659394395336 0.041871000262825656 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 18308 20712 EISAHLSALVL True PC9_epitope_Rep1 1151.65502382959 1151.65392993586 84.496 2 0.030470213297859046 0.006582659394395336 0.041876447369206 ['ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 105431 9319 SRTGEMTVL True PC9_epitope_Rep4 992.49608066004 992.49498993586 43.454 2 0.030463362358007864 0.006582659394395336 0.04188212993742375 ['ENSG00000168495|ENST00000306433|POLR3D'] 132899 12722 VVLVLAGR True PC9_epitope_Rep2 825.5436229058099 825.54252993586 54.241 2 0.030460899250766803 0.006582659394395336 0.04188417314258783 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 76141 8680 NMVAKVDEV True PC9_epitope_Rep6 1003.5008316873099 1003.49972993586 43.232 2 0.030459515350440013 0.006582659394395336 0.04188532115761968 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 71475 17755 LYVVPFVA True H1975_Epitope_Rep2 906.5214904788999 906.5209449679301 73.615 1 0.030439146413221266 0.006606013588170299 0.04190222132065665 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 60117 15116 LGLTNQPEL True PC9_epitope_Rep1 983.52876068731 983.52766993586 62.962 2 0.03041737561583298 0.0066274970622796706 0.0419202910380444 ['ENSG00000179626|ENST00000641569|OR6C4', 'OR6C4|p.L38*|1|0.39|ENSG00000179626|chr12:55551337-55551337|C/-|frameshift_variant', 'OR6C4|p.H52Tfs*16|1|0.15|ENSG00000179626|chr12:55551376-55551376|C/-|frameshift_variant'] 57771 6148 LEEQKIVQA True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 28.659 2 0.030405441109361008 0.0066274970622796706 0.04193019947271794 ['ENSG00000167842|ENST00000611091|MIS12'] 32264 5563 GFAGDDAPR True PC9_epitope_Rep1 904.40389452736 904.40278993586 26.228 2 0.030404831469501015 0.0066274970622796706 0.04193070567013416 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 20037 11290 EMDNYEPGVY True H1975_Epitope_Rep3 1215.47540478511 1215.4743099358602 48.532 2 0.0304044893118924 0.0066274970622796706 0.04193098977342236 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1'] 39729 13135 HLVDEPQNLIK True PC9_epitope_Rep1 1304.7088503076 1304.7077499358602 55.392 2 0.030393651883590132 0.0066274970622796706 0.041939989250524855 ['CON__P02769'] 64557 13232 LPSDIAAEA True PC9_epitope_Rep4 885.4443623570099 885.44381496793 58.793 1 0.030378314795533063 0.0066274970622796706 0.04195272809078496 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 126496 10479 VLLLGKLNSE True H1975_Epitope_Rep1 1084.64921017316 1084.64810993586 45.263 2 0.030366128368009136 0.0066274970622796706 0.04196285237361621 ['ENST00000602540.5_1_12:76422676-76422754:-|nuORF'] 71738 11008 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43170993586 47.37 2 0.030361831485915244 0.0066274970622796706 0.041966422648923585 ['ENSG00000026025|ENST00000544301|VIM'] 36007 21344 GTYDIFYTA True PC9_epitope_Rep1 1049.47057710485 1049.46948993586 86.93 2 0.030338568482771333 0.0066274970622796706 0.041985756352277526 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 119666 11060 VAVEPGAAV True PC9_epitope_Rep2 811.4439684341899 811.44341496793 47.86 1 0.030338227727659397 0.0066274970622796706 0.041986039607643015 ['ENSG00000171421|ENST00000505059|MRPL36'] 121870 16529 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 68.581 2 0.030315466353947843 0.0066274970622796706 0.042004963866893154 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 58209 10567 LELEQTYQA True H1975_Epitope_Rep1 1093.52915461013 1093.52804993586 45.598 2 0.030302482799200926 0.0066274970622796706 0.04201576190859989 ['ENSG00000176619|ENST00000325327|LMNB2'] 89137 11463 QVRDVIIAA True PC9_epitope_Rep2 983.5763795860698 983.57528993586 49.411 2 0.030296879471148886 0.0066274970622796706 0.042020422762963985 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 140641 12606 YRSEEACML True PC9_epitope_Rep5 1100.4630662795998 1100.46196993586 53.489 2 0.030268694650854803 0.0066499048335174 0.04204387361020293 ['SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion', 'nc|ENSG00000167642|O43291-2|SPINT2', 'ENSG00000167642|ENST00000301244|SPINT2', 'ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 10949 11596 DAGTIAGL True H1975_Epitope_Rep1 716.37046914076 716.36992496793 49.593 1 0.030252258847735372 0.0066499048335174 0.04205755397393157 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'HSPA8|p.K159E|1|0.27|ENSG00000109971|chr11:123060205-123060205|T/C|missense_variant', 'ENST00000508840.1_1_8:30095113-30095479:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 63015 19158 LLPSRQFGF True PC9_epitope_Rep1 1063.5814649665099 1063.58036993586 78.485 2 0.030249255852459685 0.0066499048335174 0.04206005393106353 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 4181 9805 AHVQNGIAL True PC9_epitope_Rep5 921.5032146458099 921.50210993586 42.682 2 0.030246473478176248 0.0066499048335174 0.04206237033691318 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 45117 21369 IPLTLLPAA True PC9_epitope_Rep1 907.5742543277498 907.57314993586 87.027 2 0.03023914672528794 0.0066499048335174 0.0420684705874513 ['ENSG00000116903|ENST00000366645|EXOC8'] 125395 14914 VISGVLQL True H1975_Epitope_Rep1 827.5116540711899 827.51110496793 62.604 1 0.030231785018020502 0.0066499048335174 0.04207460070026815 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 39545 6814 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 35.064 2 0.03021353229143991 0.0066499048335174 0.04208980307657041 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 111004 6140 THAVVGVAT True PC9_epitope_Rep1 853.4657665079299 853.46466993586 28.432 2 0.030196345803423973 0.00666948475881828 0.042104121679488404 ['ENSG00000111671|ENST00000524270|SPSB2', 'nc|ENSG00000111671|Q99619-2|SPSB2', 'SPSB1|p.D184Gfs*38|1|0.12|ENSG00000171621|chr1:9356439-9356440|-/G|frameshift_variant', 'ENSG00000175093|ENST00000310546|SPSB4', 'ENSG00000171621|ENST00000328089|SPSB1'] 33156 10332 GIVEFASK True PC9_epitope_Rep2 849.45961849833 849.45852993586 45.069 2 0.030194980499721486 0.00666948475881828 0.04210525933481154 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 109047 19002 TAISLFYEL True NCI_RA007_Epitope_Rep3 1055.5539128059902 1055.55280993586 83.027 2 0.030189830326160915 0.00666948475881828 0.04210955101308008 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 44472 21692 ILLAEVPTM True PC9_epitope_Rep5 985.55180463101 985.55070993586 88.486 2 0.030182857780415302 0.00666948475881828 0.04211536188162908 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF'] 45410 9542 IQFNPPLSEK True NCI_RA007_Epitope_Rep3 1171.62372370131 1171.62262993586 44.621 2 0.030171084624031518 0.00666948475881828 0.04212517509463081 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 101538 20713 SLLGGDVVSV True PC9_epitope_Rep2 944.51786165044 944.51731496793 85.108 1 0.03015222021613581 0.00666948475881828 0.04214090310032304 ['nc|ENSG00000157514|Q99576|TSC22D3'] 138411 11955 YHHGYSYIL True PC9_epitope_Rep2 1151.53999407735 1151.5388899358602 51.306 2 0.03012418929271206 0.00666948475881828 0.0421642828337021 ['ENSG00000134531|ENST00000256951|EMP1'] 22501 7071 ETGDEPFQYKN True NCI_RA007_Epitope_Rep3 1326.5728103272597 1326.57170993586 34.931 2 0.0301162209881846 0.00666948475881828 0.04217093096880657 ['ENSG00000135821|ENST00000331872|GLUL', 'ENST00000324731.7_1_9:34917810-34918290:+|nuORF'] 90370 8159 REHAPFLVA True NCI_RA007_Epitope_Rep4 1038.5610638750998 1038.5599699358602 38.172 2 0.030113371269491058 0.00666948475881828 0.04217330876977045 ['ENSG00000177666|ENST00000336615|PNPLA2'] 8732 18848 AVATFLQSV True PC9_epitope_Rep6 934.5123823471798 934.51128993586 85.145 2 0.030102212470532342 0.00666948475881828 0.042182620753983914 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 13799 13879 DQIYDIFQK True NCI_RA007_Epitope_Rep2 1168.5764391557198 1168.57534993586 58.638 2 0.030096369647179638 0.00666948475881828 0.04218749727113179 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 120375 3698 VEEKEGIPP True H1975_Epitope_Rep3 996.5127762699998 996.51166993586 19.283 2 0.03009060718037558 0.00666948475881828 0.04219230719172626 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 9631 10530 AYAPPPHVI True PC9_epitope_Rep4 963.5178020807899 963.51670993586 48.229 2 0.030076618186952855 0.00666948475881828 0.04220398572268944 ['ENSG00000128335|ENST00000358502|APOL2'] 1304 9318 AEDPVSEVP True H1975_Epitope_Rep2 941.43419159613 941.43308993586 40.802 2 0.030066061414125548 0.00666948475881828 0.042212800731388334 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant'] 119614 6724 VATVSLPR True NCI_RA007_Epitope_Rep3 841.5021520166499 841.50104993586 33.537 2 0.030061978436121822 0.00666948475881828 0.04221621047855136 ['CON__P00761'] 33550 11054 GLELEELEA True H1975_Epitope_Rep1 1001.4917064722498 1001.4911749679301 47.48 1 0.03006160618302645 0.00666948475881828 0.042216521363542425 ['ENSG00000144736|ENST00000325599|SHQ1', 'nc|ENSG00000144736|Q6PI26-2|SHQ1', 'ENST00000437111.1_1_10:52389508-52390123:-|nuORF'] 86079 13868 QHSITPLAL True PC9_epitope_Rep6 978.5498304850599 978.54872993586 65.167 2 0.030056859199727545 0.00666948475881828 0.04222048594981213 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 42406 5655 IEDINDHTP True H1975_Epitope_Rep2 1052.4774533904401 1052.47634993586 26.749 2 0.03003284143844162 0.00666948475881828 0.04224054996914325 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 138615 15160 YIDSDCIGNPD True H1975_Epitope_Rep3 1210.48121844154 1210.48012993586 63.716 2 0.03002796418109023 0.00666948475881828 0.04224462533680378 ['TPD52L2-PDZRN4|1|fusion', 'ENST00000548316.1_1_12:41903559-41967689:+|nuORF', 'nc|ENSG00000165966|Q6ZMN7-4|PDZRN4', 'nc|ENSG00000165966|Q6ZMN7-2|PDZRN4', 'TPD52L2-PDZRN4|2|fusion', 'ENSG00000165966|ENST00000402685|PDZRN4'] 4828 5187 ALEEVQEFHQ True H1975_Epitope_Rep3 1228.57241640444 1228.5713099358602 25.047 2 0.030027805456895783 0.00666948475881828 0.04224475797013501 ['ENSG00000164961|ENST00000318410|WASHC5'] 85818 14809 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.5132749679299 61.784 1 0.029984530484264305 0.00666948475881828 0.04228093269502848 ['ENSG00000085872|ENST00000546361|CHERP'] 85444 10492 QEYPTLKVP True NCI_RA007_Epitope_Rep4 1073.57571087973 1073.57460993586 47.205 2 0.029984488228134265 0.00666948475881828 0.042280968030963484 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 84235 19930 PYMAKFVVF True PC9_epitope_Rep4 1100.5728744287599 1100.5717699358602 84.795 2 0.02998224034180802 0.00666948475881828 0.04228284782206006 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 2741 11378 AETFDAVVA True H1975_Epitope_Rep2 921.4443623570098 921.44381496793 48.814 1 0.02997659021413105 0.00666948475881828 0.0422875730459433 ['ENSG00000132423|ENST00000254759|COQ3'] 83888 6725 PVPPPRAPL True NCI_RA007_Epitope_Rep2 942.5650866263799 942.56398993586 30.773 2 0.029952376215956155 0.00666948475881828 0.042307828400699424 ['ENST00000491612.1_1_22:46751804-46751987:+|nuORF', 'ENST00000470831.1_1_22:46751804-46752900:+|nuORF'] 117726 18147 TVVAVVAGV True PC9_epitope_Rep2 813.4960040070499 813.49490993586 75.104 2 0.029914289504502232 0.006691711669405964 0.04233970519520983 ['ENSG00000105281|ENST00000542575|SLC1A5'] 99605 4574 SIFEPAKGGEK True NCI_RA007_Epitope_Rep5 1161.6029882567298 1161.60133490379 24.253 3 0.029912854785564904 0.006691711669405964 0.042340906387376316 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 95275 14524 RVPKTLVLV True PC9_epitope_Rep3 1023.6804507317898 1023.6793499358599 60.989 2 0.029910629631334625 0.006691711669405964 0.04234276941442069 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 1376 12109 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43342993586 51.66 2 0.029903175212766454 0.006691711669405964 0.04234901119077927 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 133358 20851 VVVGDLVEV True PC9_epitope_Rep3 927.5276980581499 927.5271449679301 85.476 1 0.029901372489435963 0.006691711669405964 0.04235052077501092 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 139524 15263 YLSQDTVSV True PC9_epitope_Rep5 1010.49204082542 1010.49094993586 63.719 2 0.029897502989416173 0.006691711669405964 0.042353761214089625 ['ENSG00000117984|ENST00000236671|CTSD'] 6283 4618 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 22.859 2 0.02988129890291759 0.006691711669405964 0.0423673333107216 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 114521 11885 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.47578496793 51.04 1 0.029846687297975114 0.006691711669405964 0.04239633543954833 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 73221 19812 MSDLLSPLLY True H1975_Epitope_Rep2 1150.59439771898 1150.5938749679299 82.188 1 0.029813895063839493 0.006713615023474178 0.04242382865186006 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 136327 13162 WTAELGIRHV True PC9_epitope_Rep2 1180.63529144452 1180.6336349037902 55.9 3 0.029786940779036458 0.006713615023474178 0.04244643865431097 ['ENSG00000108106|ENST00000264552|UBE2S'] 71988 5187 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 25.024 2 0.029781549681088967 0.006713615023474178 0.04245096208764485 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 68050 12007 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48127496793 51.193 1 0.02977598175947955 0.006713615023474178 0.04245563431665573 ['ENSG00000174231|ENST00000304992|PRPF8'] 39903 17972 HPFGFVAV True PC9_epitope_Rep2 872.4544735482399 872.45336993586 74.432 2 0.029770546083761985 0.006713615023474178 0.04246019599594213 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 1213 7646 AEDDLNTVA True H1975_Epitope_Rep3 946.42435518842 946.42324993586 34.392 2 0.02976060357664338 0.006713615023474178 0.04246854093748487 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 22794 6368 EVAAAVAGT True H1975_Epitope_Rep3 787.4075829254699 787.40703496793 29.478 1 0.029757686503334286 0.006713615023474178 0.04247098955926252 ['HSD3B7|p.A80T|1|0.17|ENSG00000099377|chr16:30986120-30986120|G/A|missense_variant'] 17567 9994 EHGPNPIL True PC9_epitope_Rep3 875.45011644379 875.44900993586 43.397 2 0.029749187596423126 0.006713615023474178 0.04247812431547554 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 134520 3773 VYQNHVQHL True NCI_RA007_Epitope_Rep3 1136.57269118796 1136.5710449037902 20.976 3 0.0297445938259687 0.006713615023474178 0.04248198116931164 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 55101 8286 LAAARLAAA True PC9_epitope_Rep3 826.5024863698198 826.50138993586 36.846 2 0.029735561152791114 0.006713615023474178 0.04248956572178069 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 39169 11300 HIDPNFASL True NCI_RA007_Epitope_Rep4 1012.4977949122 1012.49668993586 50.362 2 0.029723885372520818 0.006722728443934319 0.042499371345283636 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 109743 2995 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 15.809 2 0.029709601887799003 0.006722728443934319 0.042511369605741235 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 1161 7805 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 35.005 1 0.029708164525226215 0.006722728443934319 0.042512577163340885 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 47869 15201 IYIAGHPAF True PC9_epitope_Rep2 987.51780208079 987.51670993586 63.732 2 0.029703527376710247 0.006722728443934319 0.042516473125343714 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 6415 7641 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 34.338 2 0.02970026292317137 0.006722728443934319 0.04251921598163974 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 30539 14236 GAGPSLLL True H1975_Epitope_Rep2 726.4275900940601 726.4270449679301 59.908 1 0.02969370044161817 0.006722728443934319 0.04252473035978466 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533865.5_1_11:88068232-88070840:-|nuORF', 'ENST00000534131.1_1_11:88068041-88070840:-|nuORF', 'nc|ENSG00000109861|P53634-2|CTSC', 'nc|ENSG00000109861|P53634-3|CTSC', 'ENST00000393301.4_1_11:88059607-88070840:-|nuORF', 'CTSC-RAB38|1|fusion', 'CTSC-RAB38|2|fusion'] 138267 8780 YHADIYDKV True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 39.127 2 0.029693068327483522 0.006722728443934319 0.042525261550190784 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 55544 7454 LAGPLRPAA True PC9_epitope_Rep4 864.5181364339599 864.51702993586 36.026 2 0.0296503398272505 0.006722728443934319 0.0425611810851762 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 116391 5380 TTIEEDKSVLK True NCI_RA007_Epitope_Rep4 1261.6765471198098 1261.67491490379 27.262 3 0.029624320389376863 0.006722728443934319 0.04258306686135238 ['ENSG00000183576|ENST00000331768|SETD3'] 20883 20595 EQLGTFTTL True PC9_epitope_Rep5 1008.51277627 1008.51166993586 84.265 2 0.02962429984471533 0.006722728443934319 0.04258308414590286 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 49989 18627 KIVDFSYSV True PC9_epitope_Rep5 1056.5491617787202 1056.5480699358602 76.674 2 0.029621008476533983 0.006722728443934319 0.04258585330338033 ['nc|ENSG00000156970|O60566-2|BUB1B', 'ENSG00000156970|ENST00000287598|BUB1B', 'nc|ENSG00000156970|O60566-3|BUB1B', 'ENST00000453867.6_3_15:40509736-40545453:+|nuORF'] 96860 4913 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 26.452 2 0.0296151228508352 0.006722728443934319 0.04259080549368005 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 121794 16697 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 69.053 2 0.02961340862020148 0.006722728443934319 0.042592247946702286 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 47817 20308 IYGLLKNPF True PC9_epitope_Rep2 1063.60661708519 1063.6055299358602 83.538 2 0.02960060767460322 0.006722728443934319 0.04260302071848091 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1', 'ENST00000463270.1_1_10:27418274-27425210:-|nuORF'] 36270 17273 GVDVTLPRV True PC9_epitope_Rep1 954.5498304850599 954.54872993586 71.258 2 0.02959270866196543 0.006722728443934319 0.04260966937301628 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 48994 8074 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 37.745 2 0.029574701636880685 0.006722728443934319 0.0426248293128107 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 71808 7982 MEGPVRIAA True H1975_Epitope_Rep3 942.4956867372199 942.49458993586 35.673 2 0.02956680593196732 0.006722728443934319 0.0426314780772059 ['ENST00000527967.5_1_11:125932492-125932705:-|nuORF'] 71746 11076 MEENFAVEAA True H1975_Epitope_Rep3 1109.46992548185 1109.4688299358602 47.696 2 0.029547675080591033 0.006722728443934319 0.042647591320183746 ['ENSG00000026025|ENST00000544301|VIM'] 5669 19556 APAELLAALPA True PC9_epitope_Rep6 1035.5964463243097 1035.5953499358602 87.886 2 0.02951095666347596 0.006722728443934319 0.04267853246578244 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 126636 14198 VLNEYFHNV True PC9_epitope_Rep6 1133.5505587610498 1133.54946993586 66.498 2 0.029502905957939588 0.006722728443934319 0.04268531902593037 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 140909 14085 YSEGESLFY True H1975_Epitope_Rep2 1093.46040634397 1093.4593099358601 59.332 2 0.029496091982089814 0.006722728443934319 0.04269106376854082 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 45356 20424 IQDGYLSLL True PC9_epitope_Rep6 1020.54916177872 1020.54806993586 91.264 2 0.0294806536370396 0.006722728443934319 0.0427040819973128 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 110001 18271 TEINIAFLP True H1975_Epitope_Rep2 1016.5542471591599 1016.55314993586 75.752 2 0.029476925390042534 0.006722728443934319 0.04270722631010246 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 108587 23223 SYPAFWTSF True PC9_epitope_Rep1 1104.4916469026 1104.4905499358601 94.126 2 0.02946854182682674 0.006722728443934319 0.04271429752254711 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 6563 11787 APVAEVPTA True PC9_epitope_Rep1 853.4545331178899 853.4539849679301 50.209 1 0.029448085032148946 0.006722728443934319 0.04273155621995087 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 23104 6232 EVISDEHGID True NCI_RA007_Epitope_Rep3 1112.4985827578398 1112.4974899358601 31.518 2 0.029431321615657112 0.006722728443934319 0.04274570336148849 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 107895 19371 SVVPYLPRL True PC9_epitope_Rep4 1042.61751612206 1042.61640993586 82.623 2 0.02942814043807342 0.006722728443934319 0.042748388500686955 ['nc|ENSG00000143322|P42684-4|ABL2', 'nc|ENSG00000143322|P42684-7|ABL2', 'nc|ENSG00000143322|P42684-10|ABL2', 'nc|ENSG00000143322|P42684-5|ABL2', 'nc|ENSG00000143322|P42684-2|ABL2', 'nc|ENSG00000143322|P42684-6|ABL2', 'nc|ENSG00000143322|P42684-3|ABL2', 'ENSG00000143322|ENST00000502732|ABL2'] 60802 11402 LHSNGFSL True PC9_epitope_Rep4 873.4344663796501 873.43336993586 51.628 2 0.02942552442444176 0.006722728443934319 0.04275059670896035 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 49289 8085 KEQVPGFTP True H1975_Epitope_Rep2 1001.5181960036098 1001.51708993586 36.046 2 0.029401669642817038 0.006722728443934319 0.042770737290044755 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 101857 12687 SLPKGVVEV True PC9_epitope_Rep5 926.54368247546 926.54258993586 53.806 2 0.02939831316279442 0.006722728443934319 0.042773571812017075 ['ENSG00000149257|ENST00000358171|SERPINH1'] 29639 18506 FVIRNIVEA True PC9_epitope_Rep3 1059.6076797143498 1059.60658993586 76.401 2 0.029380211168281194 0.006722728443934319 0.04278886156338907 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 1316 7229 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 32.741 1 0.02936544260792866 0.006722728443934319 0.042801339189990864 ['ENSG00000012174|ENST00000379484|MBTPS2'] 35809 15059 GTITQVIKV True PC9_epitope_Rep1 957.58588164061 957.58478993586 62.742 2 0.02936488136445951 0.006722728443934319 0.04280181343307181 ['ENSG00000166747|ENST00000299980|AP1G1', 'nc|ENSG00000166747|O43747-2|AP1G1'] 104628 14402 SQSSLIHLV True PC9_epitope_Rep6 982.5447451046201 982.54364993586 67.295 2 0.029356969894979365 0.006722728443934319 0.04280849899235669 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 99150 12307 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.4914349679301 55.151 1 0.029353470692571847 0.006722728443934319 0.042811456264168796 ['ENSG00000132646|ENST00000379143|PCNA'] 16115 9147 EEALPVTTA True H1975_Epitope_Rep2 929.47057710485 929.46948993586 40.135 2 0.02935248303207929 0.006722728443934319 0.04281229099454016 ['ENSG00000184897|ENST00000333762|H1-10'] 28848 16822 FTAQVLIL True H1975_Epitope_Rep2 903.5429541994698 903.5424049679301 69.952 1 0.029352430479449767 0.006722728443934319 0.0428123354102673 ['ENST00000447052.1_1_21:24762753-24763314:+|nuORF'] 32100 10355 GETEDTFIA True H1975_Epitope_Rep3 981.4291062156899 981.42855496793 44.884 1 0.02934959565097253 0.006722728443934319 0.04281473137066866 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 48733 7957 KDDYKHRMFWR True H1975_Epitope_Rep1 1580.7670509733998 1580.7654149037899 35.554 3 0.029290888631307275 0.006722728443934319 0.042864375418862705 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 132214 17059 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 70.77 2 0.029272993471755094 0.006722728443934319 0.042879517718970896 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 25572 5539 FEKPDSVAA True H1975_Epitope_Rep2 962.4709114580198 962.46980993586 26.313 2 0.029267904236517175 0.006722728443934319 0.042883824894197266 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 8554 13330 ATVEDLPSA True PC9_epitope_Rep1 901.4392769765699 901.43816993586 56.133 2 0.029263995744546998 0.006722728443934319 0.04288713302002189 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1', 'ENST00000585606.5_1_19:14589230-14590349:-|nuORF'] 7515 14464 ASDMLQLEY True H1975_Epitope_Rep3 1068.4797618895598 1068.47917496793 60.994 1 0.02926199866745965 0.006722728443934319 0.04288882341868067 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 27992 19247 FQLEHIM[Oxidation]DL True PC9_epitope_Rep2 1160.5535959166 1160.5524899358602 79.407 2 0.029250625289649224 0.006722728443934319 0.042898451338981056 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 26204 8810 FHDKYGNAVL True PC9_epitope_Rep4 1162.57710786206 1162.5754649037901 41.412 3 0.02924264412219766 0.006722728443934319 0.04290520874399563 ['ENST00000475465.1_1_X:77154999-77158279:+|nuORF', 'ENSG00000131174|ENST00000650309|COX7B', 'ENSG00000170516|ENST00000355591|COX7B2'] 1739 11598 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 49.678 1 0.02923276625116647 0.006722728443934319 0.042913573281527694 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 22091 13792 ESPINVTTV True PC9_epitope_Rep1 958.49712620586 958.49602993586 57.896 2 0.02923076263495314 0.006722728443934319 0.04291527010396733 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 130576 4370 VSRVESVPK True NCI_RA007_Epitope_Rep3 999.5712942056299 999.57018993586 23.958 2 0.0291834244312557 0.006722728443934319 0.042955376474295474 ['SPATA31E1|p.P1087Qfs*6|1|0.41|ENSG00000177992|chr9:87887746-87887746|C/-|frameshift_variant', 'ENSG00000177992|ENST00000325643|SPATA31E1'] 128504 7442 VPSPVSNSA True PC9_epitope_Rep5 856.4290466460401 856.4279499358599 33.58 2 0.02913762349215964 0.006722728443934319 0.04299421074377986 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160507-49161165:-|nuORF'] 61212 21241 LILNDFPSV True PC9_epitope_Rep4 1016.55424715916 1016.55314993586 89.868 2 0.029137059386191537 0.006722728443934319 0.04299468923090182 ['nc|ENSG00000148297|Q15528-2|MED22', 'ENSG00000148297|ENST00000343730|MED22'] 78528 21344 NYPPQYLILKL True PC9_epitope_Rep5 1360.77547331544 1360.77436993586 87.158 2 0.0291357502558062 0.006722728443934319 0.04299579968160142 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 590 10020 AARLPLDAA True PC9_epitope_Rep4 896.5079656730799 896.50686993586 46.205 2 0.029101683060284076 0.006722728443934319 0.04302470525252198 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 119897 5904 VDITTPKAA True NCI_RA007_Epitope_Rep5 914.5072969667399 914.50618993586 29.397 2 0.029074940916910295 0.006722728443934319 0.043047407179586376 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000422292.2_1_9:15055292-15055805:+|nuORF'] 8619 7826 ATYYGAFIKK True NCI_RA007_Epitope_Rep4 1160.6229954253197 1160.6213549037902 36.794 3 0.02907438892433376 0.006722728443934319 0.04304787588404387 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'MAP4K4|p.N123Tfs*16|1|0.22|ENSG00000071054|chr2:101825376-101825376|G/-|frameshift_variant', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'TNIK|p.P670Qfs*14|1|0.22|ENSG00000154310|chr3:171125916-171125916|G/-|frameshift_variant', 'TNIK|p.K413Gfs*15|1|0.19|ENSG00000154310|chr3:171140499-171140500|CG/-|frameshift_variant', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 126716 16580 VLPGHFNTF True PC9_epitope_Rep5 1030.5236157372199 1030.5225099358602 68.782 2 0.02906555885335956 0.006722728443934319 0.04305537420776137 ['ENSG00000176055|ENST00000316610|MBLAC2'] 14157 13483 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.45847496793 56.981 1 0.029050914869102218 0.006722728443934319 0.04306781203934106 ['ENSG00000149823|ENST00000279281|VPS51'] 87752 16580 QRAWTVEQL True PC9_epitope_Rep3 1129.5880068989297 1129.5869099358601 68.913 2 0.02904449421698833 0.006722728443934319 0.04307326636683551 ['ENSG00000100442|ENST00000396062|FKBP3'] 130535 4351 VSQVGKEL True PC9_epitope_Rep6 858.4810822188998 858.47998993586 23.819 2 0.029032160823004572 0.006722728443934319 0.043083745199816365 ['ENSG00000168209|ENST00000307365|DDIT4'] 71984 5428 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 25.905 1 0.029009282040752864 0.006722728443934319 0.04310318945620448 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 1468 5521 AEEHLTVDA True H1975_Epitope_Rep1 983.45598966987 983.45488993586 26.299 2 0.02900820809222804 0.006722728443934319 0.04310410236847178 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 43947 12319 IIDNSQGF True PC9_epitope_Rep4 892.4290466460399 892.4279499358599 55.195 2 0.029006032091440526 0.006722728443934319 0.04310595213300827 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 124818 9872 VHGPPVQL True PC9_epitope_Rep4 845.47593726881 845.47484993586 45.623 2 0.029004119993797938 0.006722728443934319 0.04310757761566245 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 54773 17828 KYNANFVTF True PC9_epitope_Rep5 1102.54474510462 1102.5441749679298 73.595 1 0.029002605935828093 0.006722728443934319 0.04310886475997292 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 37793 14500 GYEPPVQESV True PC9_epitope_Rep1 1103.51350454599 1103.5124099358602 60.6 2 0.028999673101643243 0.006722728443934319 0.04311135813970591 ['ENSG00000145425|ENST00000274065|RPS3A'] 121866 16147 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 67.097 2 0.02898471394794556 0.006722728443934319 0.04312407772724892 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 47250 14107 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 59.273 2 0.02898347750873612 0.006722728443934319 0.04312512919918714 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 105096 10774 SREEQAVLL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 49.202 2 0.028964803644245952 0.006722728443934319 0.04314101216297445 ['nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1'] 95789 17451 RYIFAKNLF True PC9_epitope_Rep4 1170.6549642599398 1170.65386993586 75.122 2 0.028961871532558928 0.006722728443934319 0.043143506507491915 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 25660 8232 FEQEMATAA True NCI_RA007_Epitope_Rep1 996.4222470134398 996.42114993586 36.019 2 0.028945209061801327 0.006722728443934319 0.04315768358119448 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 140157 6746 YQSKYEEL True NCI_RA007_Epitope_Rep5 1058.49204082542 1058.49094993586 32.622 2 0.028907833266234893 0.006722728443934319 0.04318949874534843 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'KRT75|p.T344S|1|0.41|ENSG00000170454|chr12:52430545-52430545|G/C|missense_variant'] 116460 21655 TTLPGLLTV True PC9_epitope_Rep2 913.5484335027301 913.54732993586 88.771 2 0.028904326031837978 0.006722728443934319 0.043192485208568714 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 35877 8354 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.4716749679301 38.805 1 0.028890293780461977 0.006722728443934319 0.04320443563790808 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 71359 17402 LYRLKFNEF True PC9_epitope_Rep2 1228.6604435632 1228.65934993586 72.196 2 0.02887163499384503 0.006722728443934319 0.04322033056008301 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 95050 11134 RTSTGIIGV True PC9_epitope_Rep1 902.5185303567799 902.51742993586 47.711 2 0.028869036625714134 0.006722728443934319 0.043222544434423076 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 7079 15303 AQSELETAL True PC9_epitope_Rep2 960.47639076128 960.47528993586 64.145 2 0.028864816541086375 0.006722728443934319 0.043226140256818854 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 116590 4903 TVADHIQKV True PC9_epitope_Rep2 1009.5556441414899 1009.55454993586 24.224 2 0.028834090770587278 0.006722728443934319 0.04325232853163107 ['ENSG00000181789|ENST00000314797|COPG1'] 47302 11272 IVDSATALY True H1975_Epitope_Rep2 951.49131254943 951.4907649679301 48.403 1 0.028832506543652468 0.006722728443934319 0.04325367916954242 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 7663 8823 ASITALEAK True PC9_epitope_Rep1 902.50729696674 902.50618993586 38.779 2 0.028827687841357197 0.006722728443934319 0.04325778759026293 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 39435 5141 HKVPGDVSL True NCI_RA007_Epitope_Rep5 950.5185303567799 950.51742993586 26.47 2 0.028821268136225816 0.006722728443934319 0.043263261539193396 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 17488 7040 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.53465490379 32.09 3 0.028818203500754962 0.006722728443934319 0.043265874897476124 ['ENSG00000162378|ENST00000294353|ZYG11B'] 63705 22329 LMYTEVWNNL True PC9_epitope_Rep1 1281.6063593850097 1281.6052699358602 90.702 2 0.02881250665066173 0.006722728443934319 0.04327073322471148 ['ENST00000466599.1_1_7:133979587-133979849:-|nuORF', 'ENSG00000205060|ENST00000378509|SLC35B4'] 84837 9202 QEAISVVA True H1975_Epitope_Rep2 815.4388830537499 815.43833496793 40.349 1 0.02880550468231938 0.006722728443934319 0.043276705203612036 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B'] 102476 21210 SLVELLNQI True PC9_epitope_Rep6 1027.5913609438699 1027.59026993586 94.433 2 0.028798590705424502 0.006722728443934319 0.043282602821309836 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 132949 14777 VVPAALKVV True PC9_epitope_Rep5 894.59023874506 894.58914993586 61.839 2 0.02879814184428164 0.006722728443934319 0.04328298572315552 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 87368 20622 QPSSLLPLA True PC9_epitope_Rep5 924.5280324113199 924.52692993586 84.373 2 0.02879706764237123 0.006722728443934319 0.04328390208480197 ['ENSG00000117984|ENST00000236671|CTSD'] 90876 5405 REVEHFLKA True NCI_RA007_Epitope_Rep4 1127.60874234351 1127.60710490379 27.362 3 0.028784069623500323 0.006722728443934319 0.043294991516312824 ['ENSG00000141526|ENST00000582743|SLC16A3'] 27777 18379 FQADGTYTL True PC9_epitope_Rep5 1014.4658260775799 1014.46472993586 75.713 2 0.028754141005819224 0.006722728443934319 0.043320534684091666 ['ENSG00000108344|ENST00000264639|PSMD3', 'nc|ENSG00000108344|O43242-2|PSMD3', 'ENST00000415039.7_1_17:38140716-38152959:+|nuORF', 'ENST00000485835.1_1_17:38151035-38151804:+|nuORF'] 115222 19106 TRDVAFLL True PC9_epitope_Rep2 933.5283667644899 933.52726993586 78.862 2 0.028740414785685335 0.006722728443934319 0.043332253875756004 ['ENSG00000164291|ENST00000380009|ARSK'] 132902 13301 VVLVLAGR True PC9_epitope_Rep5 825.5436229058099 825.54252993586 56.173 2 0.0287371442282604 0.006722728443934319 0.04333504661393139 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 76030 22167 NMAELFAVV True PC9_epitope_Rep4 992.5001034113199 992.49900993586 93.49 2 0.028733961305285632 0.006722728443934319 0.04333776466752146 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 49166 10951 KELFQTPVC True H1975_Epitope_Rep2 1063.5372171960298 1063.5361099358602 47.154 2 0.028713036656615596 0.006722728443934319 0.043355636851802826 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 117186 11070 TVLERVEGA True PC9_epitope_Rep5 972.5240096600398 972.52290993586 47.57 2 0.028705435497656265 0.006731803094759479 0.04336213071126948 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 31437 11433 GEAIPALAA True H1975_Epitope_Rep3 811.44396843419 811.44341496793 49.096 1 0.028696584307105998 0.006731803094759479 0.043369693544384115 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 91214 13571 RGDLPFVVPR True PC9_epitope_Rep4 1154.6560268890998 1154.65492993586 60.095 2 0.02866475651490355 0.006731803094759479 0.043396897814602126 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 53373 6202 KQTDVAAEV True PC9_epitope_Rep5 959.4923751785899 959.49126993586 28.839 2 0.028654417910338906 0.006731803094759479 0.043405737679104474 ['ENSG00000171940|ENST00000371471|ZNF217'] 39900 18945 HPFGFVAV True PC9_epitope_Rep1 872.4544735482399 872.45336993586 77.655 2 0.02865330930404694 0.006731803094759479 0.04340668566655482 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 110597 8329 TFSVVPSPK True H1975_Epitope_Rep3 960.5280324113198 960.52692993586 37.022 2 0.028651112626785116 0.006731803094759479 0.043408564133273986 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 88866 13115 QVDPLSALKY True H1975_Epitope_Rep1 1132.6128246644398 1132.61172993586 55.539 2 0.028644233228011875 0.006731803094759479 0.04341444742914927 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 49225 7010 KENPYEDIP True H1975_Epitope_Rep3 1103.51350454599 1103.5124099358602 31.928 2 0.02864069961568013 0.006731803094759479 0.04341746965499348 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C', 'ENST00000481894.1_1_1:115138166-115167938:-|nuORF'] 21881 13193 ESDFSNPLY True H1975_Epitope_Rep3 1070.4556553167 1070.45454993586 56.0 2 0.028632298250818807 0.006731803094759479 0.043424655886303176 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 70350 20117 LVSPASFENV True PC9_epitope_Rep5 1061.5393253710101 1061.53822993586 82.427 2 0.028628392013617825 0.006731803094759479 0.04342799748768419 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 133767 16678 VYENVSHFL True PC9_epitope_Rep4 1106.53965972418 1106.53856993586 72.127 2 0.028627811905416085 0.006731803094759479 0.04342849376145629 ['ENSG00000164933|ENST00000297578|SLC25A32'] 109912 14301 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.44762993586 60.159 2 0.02862713645869683 0.006731803094759479 0.043429071601949684 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 107723 9893 SVSDLFNTK True NCI_RA007_Epitope_Rep4 1009.50802524273 1009.50692993586 44.9 2 0.028626881676982314 0.006731803094759479 0.04342928956782659 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 36015 21269 GTYDIFYTA True PC9_epitope_Rep5 1049.47057710485 1049.46948993586 86.862 2 0.028620754328595784 0.006731803094759479 0.04343453179693256 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 103722 5643 SPVFTSRSAA True PC9_epitope_Rep4 1021.51925863277 1021.51816993586 28.502 2 0.028618660003112466 0.006731803094759479 0.04343632371211129 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 141265 6678 YTDKIM[Oxidation]TY True H1975_Epitope_Rep1 1049.47394861357 1049.47284993586 30.741 2 0.02861543578974399 0.006731803094759479 0.04343908248756644 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 95929 7743 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.6154299358602 36.481 2 0.02860375272471884 0.006731803094759479 0.04344908026558671 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 93111 7725 RPNQDGTLIA True PC9_epitope_Rep5 1083.56727145435 1083.5661699358602 34.655 2 0.028588123241743514 0.006731803094759479 0.04346245824282564 ['ENSG00000007168|ENST00000397195|PAFAH1B1'] 73552 8021 MVRPVAVAA True PC9_epitope_Rep4 912.5215075622399 912.52040993586 38.303 2 0.028585917450722226 0.006731803094759479 0.04346434655999855 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 96013 14316 RYLPDTLLL True NCI_RA007_Epitope_Rep3 1102.63864548946 1102.63754993586 63.629 2 0.02858397426771272 0.006731803094759479 0.04346601012334168 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 22452 15856 ETEVSFLDY True H1975_Epitope_Rep1 1101.4866210918099 1101.4860749679299 66.298 1 0.028554719602810766 0.006731803094759479 0.04349106163865327 ['ENSG00000139117|ENST00000331366|CPNE8', 'CPNE8|p.Y389Vfs*3|1|0.19|ENSG00000139117|chr12:38685596-38685597|-/C|frameshift_variant'] 8307 10690 ATILTNSVIA True H1975_Epitope_Rep1 1001.57571087973 1001.5746099358599 46.078 2 0.028554450497283536 0.006731803094759479 0.04349129213743532 ['ENSG00000181001|ENST00000641645|OR52N1'] 5680 14042 APAGIPAVA True PC9_epitope_Rep5 765.43848913093 765.43738993586 59.028 2 0.02854732861654253 0.006731803094759479 0.04349739266699846 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 15445 19020 EALFQPSFL True NCI_RA007_Epitope_Rep2 1050.53859709502 1050.53807496793 78.834 1 0.028541531016480676 0.006731803094759479 0.04350235936753691 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 29506 23249 FVFPGELLL True PC9_epitope_Rep4 1033.5848190114498 1033.5837299358602 97.677 2 0.028529308319659552 0.006731803094759479 0.0435128319105655 ['ENSG00000105281|ENST00000542575|SLC1A5'] 389 15562 AALDIYETL True NCI_RA007_Epitope_Rep3 1007.51752729727 1007.51642993586 68.777 2 0.028491167079592046 0.006731803094759479 0.0435455255047932 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 92991 6782 RPKPIITSV True PC9_epitope_Rep2 1009.62841515893 1009.62730993586 31.491 2 0.028490372124223114 0.006731803094759479 0.04354620713975848 ['ENSG00000168802|ENST00000448552|CHTF8'] 34652 13422 GQATTAYFL True NCI_RA007_Epitope_Rep3 970.47599683846 970.47544496793 60.073 1 0.028490244351668446 0.006731803094759479 0.043546316699257744 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 111905 14292 TIPEAFRGV True PC9_epitope_Rep4 988.5341804209198 988.53308993586 62.874 2 0.028485876487085064 0.006731803094759479 0.04355006209692059 ['ENSG00000213719|ENST00000375784|CLIC1'] 2146 4778 AELPSRTP True H1975_Epitope_Rep2 869.46068112749 869.45958993586 23.468 2 0.028465430591298187 0.006731803094759479 0.04356759787044579 ['ENSG00000198113|ENST00000357503|TOR4A'] 96907 13896 SAVGQFVSL True NCI_RA007_Epitope_Rep3 906.4810822188999 906.47998993586 61.979 2 0.02844488493928835 0.006731803094759479 0.04358522523555602 ['BRF1|p.L343Pfs*104|1|0.45|ENSG00000185024|chr14:105226091-105226092|-/A|frameshift_variant', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1', 'nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1'] 34918 13225 GQNNSVFTL True NCI_RA007_Epitope_Rep4 978.47705946762 978.47596993586 57.996 2 0.028438353495433815 0.006731803094759479 0.043590830225981314 ['ENSG00000131475|ENST00000253794|VPS25'] 31638 6490 GEFKEQLQA True NCI_RA007_Epitope_Rep3 1048.5189242796 1048.5178299358602 32.559 2 0.028433873274964338 0.006731803094759479 0.04359467530261008 ['ENSG00000184743|ENST00000398868|ATL3'] 105492 18231 SRYPDQWIV True PC9_epitope_Rep2 1162.57710786206 1162.5760099358602 75.443 2 0.028433144382895653 0.006731803094759479 0.04359530088963048 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 30702 15111 GALETIWR True PC9_epitope_Rep2 944.5079656730799 944.50686993586 63.381 2 0.028429526017585426 0.006731803094759479 0.043598406540858406 ['ENSG00000162461|ENST00000294454|SLC25A34'] 47864 10057 IYIAGHPAF True NCI_RA007_Epitope_Rep3 987.51780208079 987.51670993586 46.654 2 0.02842710642602933 0.006731803094759479 0.04360048338654016 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 132846 19408 VVLKMVTEI True PC9_epitope_Rep1 1030.6096538602999 1030.60854993586 79.463 2 0.02840908817751796 0.006731803094759479 0.043615951909892224 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS', 'KPNA1-GMPS|1|fusion', 'ENST00000514075.2_1_4:8176279-8176723:+|nuORF'] 105227 9853 SRIETSNVI True PC9_epitope_Rep5 1017.54547338061 1017.54436993586 42.868 2 0.028390845391894803 0.006731803094759479 0.04363161793891339 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 28967 16614 FTDVNKIYL True PC9_epitope_Rep4 1111.5913609438699 1111.59026993586 71.876 2 0.02839070979986121 0.006731803094759479 0.043631734396713695 ['ENSG00000101337|ENST00000398022|TM9SF4'] 71653 5711 MEADLKAAA True H1975_Epitope_Rep3 918.4480678384599 918.44696993586 26.996 2 0.028377330732219472 0.006731803094759479 0.04364322675768357 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.E488K|1|0.2|ENSG00000102316|chrX:54815323-54815323|G/A|missense_variant'] 114772 5632 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.5496749679301 28.351 1 0.02835184507026809 0.006731803094759479 0.04366512555331272 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 17305 13572 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 63.942 2 0.028338694160259238 0.006731803094759479 0.04367642924168728 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 74235 7196 NEIDAEPPA True H1975_Epitope_Rep3 954.42944056886 954.42834993586 32.654 2 0.028313704805423535 0.006731803094759479 0.043697915345085755 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 43034 5138 IETNHNLPP True H1975_Epitope_Rep3 1033.5192586327698 1033.5181699358602 24.867 2 0.02829532775189346 0.006731803094759479 0.04371372184335292 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 25986 10654 FGEENIEVYHS True NCI_RA007_Epitope_Rep1 1322.5778957077 1322.57678993586 45.432 2 0.028288655216460786 0.006731803094759479 0.043719462234063804 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 48991 8521 KEFIKIVEA True NCI_RA007_Epitope_Rep4 1075.62774645259 1075.62664993586 39.566 2 0.028209471347855418 0.006731803094759479 0.043787633033976404 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 106801 17390 SVAESLNYV True PC9_epitope_Rep2 980.48147614172 980.48036993586 72.152 2 0.028196887101341852 0.006731803094759479 0.043798475330945115 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 7652 7670 ASIHEAWTDGK True PC9_epitope_Rep3 1213.57275075761 1213.57111490379 34.5 3 0.028179347233702797 0.006731803094759479 0.043813591073929785 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 43860 13410 IHSSIVSTL True PC9_epitope_Rep1 955.5338460677501 955.53274993586 56.443 2 0.028169742583899274 0.006731803094759479 0.043821870172000156 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 66049 11677 LSEGVTISY True H1975_Epitope_Rep3 967.4862271689901 967.48512993586 50.053 2 0.02816957014879659 0.006731803094759479 0.04382201882120103 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 34673 20130 GQDGLYIGV True PC9_epitope_Rep3 920.4603467743199 920.45924993586 82.683 2 0.028168434637301856 0.006731803094759479 0.04382299770957502 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 17428 8554 EHDPVGQMV True PC9_epitope_Rep6 1010.44913046762 1010.44802993586 42.67 2 0.028165055223091828 0.006731803094759479 0.04382591110485157 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 74742 6717 NHANGLTL True PC9_epitope_Rep6 838.4297153523801 838.42860993586 34.614 2 0.028154234835442965 0.006731803094759479 0.04383524047290256 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 2470 5185 AEQLRDEEV True H1975_Epitope_Rep3 1087.51456717515 1087.51346993586 25.04 2 0.028148374040414575 0.006731803094759479 0.043840294369391915 ['ENSG00000149257|ENST00000358171|SERPINH1'] 1751 10364 AEGRIIWPA True H1975_Epitope_Rep1 1011.5501648382299 1011.54906993586 44.813 2 0.028144770627686593 0.006731803094759479 0.04384340191911972 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 71039 20120 LYIVHPTMF True PC9_epitope_Rep2 1119.57868808519 1119.57758993586 82.8 2 0.02813588700381233 0.006731803094759479 0.04385106387160983 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 142163 17400 YVTDVLYRV True PC9_epitope_Rep6 1126.60225998074 1126.60116993586 79.544 2 0.02809807648057082 0.006731803094759479 0.04388368740823167 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1'] 71016 23355 LYIPIFSTF True PC9_epitope_Rep4 1099.59538369515 1099.5942899358602 98.093 2 0.028090623978145324 0.006731803094759479 0.043890119975356974 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'MTMR12|p.F493L|1|0.16|ENSG00000150712|chr5:32234995-32234995|G/T|missense_variant'] 41532 19118 HYPPVQVLF True PC9_epitope_Rep4 1098.58621599378 1098.5851099358601 81.631 2 0.02808178085451268 0.006731803094759479 0.04389775388267417 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 133627 14369 VYAEVSRLLL True NCI_RA007_Epitope_Rep4 1161.6757592741699 1161.67466993586 62.578 2 0.028080535221541678 0.006731803094759479 0.043898829277141754 ['ENSG00000114999|ENST00000233336|TTL'] 61012 18154 LIENVASL True PC9_epitope_Rep4 857.4858332461699 857.48472993586 77.893 2 0.02806075962276885 0.006731803094759479 0.043915905170359544 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 133489 20862 VWFPDMMPTW True NCI_RA007_Epitope_Rep3 1308.5671374253197 1308.5660299358601 90.837 2 0.028059118587143713 0.006731803094759479 0.04391732242963114 ['ENSG00000005812|ENST00000355619|FBXL3'] 123315 10689 VGLQVVAVK True PC9_epitope_Rep6 911.5804023373498 911.57930993586 51.929 2 0.028057809735191754 0.006731803094759479 0.043918452830540966 ['ENSG00000144381|ENST00000388968|HSPD1'] 35761 17211 GTIGLIHAI True PC9_epitope_Rep2 893.53345214493 893.53234993586 71.459 2 0.028053453858648273 0.006731803094759479 0.04392221499725245 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 39541 9227 HLGALLAR True PC9_epitope_Rep5 849.51847078713 849.51736993586 40.438 2 0.028048722245722937 0.006731803094759479 0.043926301996620884 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 7268 13823 ARDFTVSAL True PC9_epitope_Rep4 978.5134449763399 978.51234993586 61.066 2 0.028042885283610652 0.006731803094759479 0.04393134420141883 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 53411 13453 KQVSDLISVL True NCI_RA007_Epitope_Rep3 1100.6441247927198 1100.64302993586 60.199 2 0.028034766873598203 0.006731803094759479 0.04393835802904927 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 40529 18768 HRDYFLQEL True PC9_epitope_Rep5 1219.5985715826298 1219.59746993586 77.202 2 0.028031184457856406 0.006731803094759479 0.043941453326799856 ['nc|ENSG00000240771|Q86VW2-2|ARHGEF25', 'ENSG00000240771|ENST00000286494|ARHGEF25', 'nc|ENSG00000240771|Q86VW2-3|ARHGEF25'] 89997 8827 RDLVAIEA True NCI_RA007_Epitope_Rep4 885.4919812557699 885.49088993586 40.764 2 0.02802706342771346 0.006731803094759479 0.04394501422955214 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 109293 20996 TAVPSLFSV True PC9_epitope_Rep4 919.50148331031 919.5009349679301 88.923 1 0.028024998467088953 0.006731803094759479 0.043946798614208936 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 71985 5533 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 26.29 1 0.02802394690400388 0.006731803094759479 0.04394770732003818 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 9208 19492 AVMPTLIQA True PC9_epitope_Rep4 942.5208388558998 942.51974993586 83.092 2 0.028021390816865624 0.006731803094759479 0.04394991622327104 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 47738 17618 IYDSVKVYF True PC9_epitope_Rep6 1132.5804619069997 1132.57936993586 80.407 2 0.02800798191376845 0.006731803094759479 0.04396150538579252 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 93113 6086 RPNSGIIDA True PC9_epitope_Rep4 941.4930438849299 941.49194993586 30.417 2 0.028006654360332076 0.006731803094759479 0.04396265291600588 ['ENSG00000124164|ENST00000475243|VAPB', 'nc|ENSG00000124164|O95292-2|VAPB', 'ENST00000265619.6_1_20:56965263-57014041:+|nuORF'] 33159 10194 GIVEFSGK True PC9_epitope_Rep1 835.44396843419 835.44286993586 44.089 2 0.02799385095730989 0.006731803094759479 0.04397372141319023 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 89506 13524 QYKDVPITY True PC9_epitope_Rep5 1125.57062549929 1125.5695299358601 57.042 2 0.027993508440559818 0.006731803094759479 0.04397401755015135 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 24812 19611 FAVALPQLL True H1975_Epitope_Rep1 970.5851533646198 970.5846049679301 81.643 1 0.02797992001458001 0.006731803094759479 0.04398576734682271 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 124823 9400 VHGPPVQL True PC9_epitope_Rep6 845.47593726881 845.47484993586 46.363 2 0.02797816658401341 0.006731803094759479 0.04398728371712199 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 44185 8693 IIYGGSVTG True H1975_Epitope_Rep1 865.45453311789 865.4539849679301 38.368 1 0.027973096304920776 0.006731803094759479 0.04399166875395646 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 19657 6896 ELREALTTG True H1975_Epitope_Rep3 988.5189242795999 988.51782993586 31.484 2 0.02796050398864731 0.006731803094759479 0.04400256083573036 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 11889 6357 DHINGRVL True PC9_epitope_Rep3 922.49846361854 922.49736993586 29.478 2 0.027958804098136787 0.006731803094759479 0.044004031379362464 ['ENSG00000196878|ENST00000356082|LAMB3'] 114086 3885 TPFQGQGHGA True PC9_epitope_Rep4 998.4569927293797 998.45588993586 21.125 2 0.027948236952583843 0.006731803094759479 0.04401317375421469 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 72812 6675 MPFQGSGKSA True PC9_epitope_Rep5 1008.4698659121999 1008.46876993586 30.647 2 0.02794733217230541 0.006731803094759479 0.044013956617546014 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 48125 21810 IYPDSFTVL True PC9_epitope_Rep2 1053.53826274185 1053.5371699358602 89.366 2 0.02794184144577519 0.006731803094759479 0.044018707735039526 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 134797 19842 VYTVVDEM[Oxidation]F True PC9_epitope_Rep2 1117.50016336141 1117.49906993586 81.713 2 0.027941397146434302 0.006731803094759479 0.04401909220559959 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 4670 17076 ALAPGLPTA True PC9_epitope_Rep1 809.46470387877 809.46360993586 70.509 2 0.027934300043965247 0.006731803094759479 0.0440252340070299 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 108181 18627 SYGDILHVI True PC9_epitope_Rep6 1015.53384606775 1015.53274993586 84.291 2 0.027933723771563255 0.006731803094759479 0.04402573274251283 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 72214 16481 MHAGSLLL True PC9_epitope_Rep3 840.45275929608 840.45166993586 68.531 2 0.02792577212336186 0.006731803094759479 0.04403261499251103 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'RANBP2|p.L369Kfs*5|1|0.07|ENSG00000153201|chr2:108748957-108748958|TT/-|frameshift_variant', 'RGPD4|p.V610Ffs*5|1|0.07|ENSG00000196862|chr2:107860831-107860831|G/-|frameshift_variant', 'RGPD4|p.M814Ifs*6|1|0.37|ENSG00000196862|chr2:107863005-107863005|G/-|frameshift_variant', 'RGPD3|p.H839Ifs*29|1|0.29|ENSG00000153165|chr2:106429736-106429736|G/-|frameshift_variant', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 60684 12074 LHNDSVVSL True PC9_epitope_Rep5 982.5083595959001 982.50726993586 51.437 2 0.02792525271026248 0.006731803094759479 0.04403306458269305 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 115566 13168 TRSQPFTL True PC9_epitope_Rep1 948.5028802926399 948.50178993586 55.516 2 0.02792466506644518 0.006731803094759479 0.04403357323626096 ['ENSG00000112159|ENST00000369393|MDN1'] 9084 18588 AVIGDVIRV True PC9_epitope_Rep1 940.57056592964 940.56946993586 76.286 2 0.027921896820341442 0.006731803094759479 0.04403596944560304 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 101046 10416 SLGEISALTSK True NCI_RA007_Epitope_Rep2 1104.60265390356 1104.60154993586 45.108 2 0.02791142423571633 0.006754072308303536 0.04404503557304028 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 89645 5344 QYTHKIYHL True NCI_RA007_Epitope_Rep4 1201.6243924076498 1201.6227449037901 27.121 3 0.027898217655487386 0.006754072308303536 0.04405647077760864 ['ENST00000460566.5_1_22:28293057-28315179:-|nuORF', 'ENSG00000180957|ENST00000335272|PITPNB', 'nc|ENSG00000180957|P48739-2|PITPNB', 'nc|ENSG00000180957|P48739-3|PITPNB', 'ENST00000471825.1_1_22:28306950-28315179:-|nuORF', 'ENSG00000174238|ENST00000313486|PITPNA'] 5916 14715 APGNPVLAV True PC9_epitope_Rep6 836.4756029156399 836.4745099358599 68.549 2 0.027896904633227658 0.006754072308303536 0.04405760782391557 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 114406 9436 TPTFTYKAA True PC9_epitope_Rep4 998.5072969667398 998.50618993586 43.907 2 0.027894117273830753 0.006754072308303536 0.044060021693809986 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000599648.1_1_19:7705628-7705700:+|nuORF'] 95 14896 AAAPVVPAV True PC9_epitope_Rep2 793.4697892592098 793.46868993586 62.563 2 0.027890501375035775 0.006754072308303536 0.044063153250709614 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 7040 3816 AQQELEEQTR True NCI_RA007_Epitope_Rep2 1230.5840437172997 1230.5829499358601 19.477 2 0.02788786499452395 0.006754072308303536 0.0440654366125491 ['ENSG00000147065|ENST00000360270|MSN', 'ENST00000511640.1_1_5:25909808-25910855:+|nuORF'] 139522 14869 YLSQDTVSV True PC9_epitope_Rep2 1010.49204082542 1010.49094993586 62.456 2 0.027882036559093243 0.006754072308303536 0.04407048496002957 ['ENSG00000117984|ENST00000236671|CTSD'] 134665 10748 VYSRDPNYL True PC9_epitope_Rep1 1125.5454733806098 1125.54436993586 46.23 2 0.027881003128150388 0.006775226035558256 0.04407138012590815 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 87428 14912 QPYMPTVSA True PC9_epitope_Rep4 992.4637179025999 992.46262993586 65.3 2 0.02788002693766203 0.006775226035558256 0.04407222572380837 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 119629 8674 VATVSLPR True PC9_epitope_Rep4 841.5021520166499 841.50104993586 40.854 2 0.027869728862079852 0.006775226035558256 0.044081146983038305 ['CON__P00761'] 43623 6364 IGVLDEGK True NCI_RA007_Epitope_Rep5 829.45453311789 829.45342993586 31.154 2 0.027836269513783953 0.006775226035558256 0.04411014349425951 ['ENSG00000170889|ENST00000302907|RPS9'] 39912 16335 HPFGFVAV True PC9_epitope_Rep6 872.4544735482399 872.45336993586 75.204 2 0.02782805099434866 0.006775226035558256 0.044117268291342104 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 130803 10494 VTANTMENV True PC9_epitope_Rep1 977.44879611445 977.44768993586 45.255 2 0.027801602211249412 0.006775226035558256 0.04414020388065364 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant'] 100734 11049 SLDVGGPLRY True H1975_Epitope_Rep2 1075.56620882519 1075.56567496793 47.53 1 0.027781602478622568 0.006775226035558256 0.044157553751629545 ['ENSG00000176894|ENST00000317479|PXMP2'] 49030 7162 KEFQDLREV True NCI_RA007_Epitope_Rep4 1162.5982372294598 1162.5965849037902 34.171 3 0.027772037058532824 0.006775226035558256 0.04416585384418834 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1', 'GLE1|p.E192D|1|0.07|ENSG00000119392|chr9:128522811-128522811|G/C|missense_variant'] 40743 4217 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 22.596 3 0.027737800148665222 0.006775226035558256 0.044195572674091924 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 27443 19035 FLYPNVSLL True H1975_Epitope_Rep2 1064.59063266788 1064.5895299358601 79.018 2 0.027737627907517767 0.006775226035558256 0.04419572222820363 ['ENST00000394434.6_1_5:145551543-145552296:-|nuORF'] 104349 18327 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54427496793 75.704 1 0.027718302979347628 0.006775226035558256 0.04421250446196096 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 49931 17903 KILEDVVGV True PC9_epitope_Rep1 970.5698972232999 970.56880993586 73.656 2 0.027714893334190277 0.006775226035558256 0.044215466039986245 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 96725 20209 SALPFITYL True H1975_Epitope_Rep3 1023.5640835668698 1023.56298993586 84.525 2 0.02769544214645903 0.006775226035558256 0.04423236432731427 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 8431 6521 ATNGPPVLVK True NCI_RA007_Epitope_Rep4 994.58113061334 994.58002993586 31.688 2 0.02765223311761979 0.006775226035558256 0.04426992188679351 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 127735 13257 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.45852993586 56.003 2 0.02764819874489009 0.006797000910938267 0.044273429966544736 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 118340 18560 TYMKDLYQL True PC9_epitope_Rep2 1173.5739966275698 1173.57288993586 76.743 2 0.027636396644524486 0.006797000910938267 0.044283693807630135 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 107331 20712 SVLGAITSV True PC9_epitope_Rep3 845.48583324617 845.48472993586 84.942 2 0.027634546308237345 0.006797000910938267 0.04428530315787571 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 115126 11926 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 50.893 2 0.027631615248380363 0.006797000910938267 0.044287852580608945 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 127645 10064 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 43.581 1 0.02762439189242008 0.006797000910938267 0.04429413595362351 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 118383 17513 TYNYPVHYF True PC9_epitope_Rep2 1202.53965972418 1202.53856993586 72.623 2 0.027616363934328998 0.006797000910938267 0.044301120110397094 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 15068 21020 DYSDIVTTL True PC9_epitope_Rep4 1025.49170647225 1025.4906099358602 89.015 2 0.027596361545328456 0.006797000910938267 0.04431852582812356 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF'] 24415 15197 FADEGSIFY True H1975_Epitope_Rep1 1047.45492704071 1047.4543749679299 63.718 1 0.027584013898785918 0.006797000910938267 0.044329273416415314 ['nc|ENSG00000107745|Q9BPX6-2|MICU1', 'ENSG00000107745|ENST00000361114|MICU1', 'nc|ENSG00000107745|Q9BPX6-3|MICU1', 'nc|ENSG00000107745|Q9BPX6-6|MICU1'] 126628 7520 VLNENTVSA True PC9_epitope_Rep6 945.47672511445 945.47562993586 38.184 2 0.027582761556595687 0.006797000910938267 0.044330363598219506 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1', 'ENST00000462441.1_1_2:63101526-63108832:+|nuORF'] 134784 22197 VYTVVDEMF True PC9_epitope_Rep1 1101.5052483614097 1101.50467496793 90.201 1 0.02757532808994474 0.006797000910938267 0.04433683500445213 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 98161 8088 SESRFFVSS True H1975_Epitope_Rep2 1044.48762415132 1044.48652993586 36.057 2 0.027565567894887975 0.006819561866504741 0.0443453332214049 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 120120 13484 VEADGAWVV True H1975_Epitope_Rep2 944.4603467743199 944.4597949679301 56.998 1 0.02755325435643618 0.006819561866504741 0.044356056605128584 ['ENSG00000211455|ENST00000389032|STK38L', 'nc|ENSG00000211455|Q9Y2H1-2|STK38L'] 29499 21778 FVFPGELLL True NCI_RA007_Epitope_Rep5 1033.5848190114498 1033.5837299358602 90.892 2 0.027551115323152166 0.006819561866504741 0.04435791963007881 ['ENSG00000105281|ENST00000542575|SLC1A5'] 9533 3569 AVYDRPGASPK True NCI_RA007_Epitope_Rep4 1159.5985715826298 1159.59691490379 19.75 3 0.02754666105655534 0.006819561866504741 0.044361799356723075 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 4380 19684 AINDSFLSA True PC9_epitope_Rep1 936.45526139388 936.45416993586 80.538 2 0.0275435077431885 0.006819561866504741 0.04436454610906431 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'NLRP2|p.G703D|1|0.38|ENSG00000022556|chr19:54985124-54985124|G/A|missense_variant'] 120907 7575 VENPGGYVA True H1975_Epitope_Rep2 904.42904664604 904.4279499358599 34.089 2 0.027489284061672985 0.006837487165126482 0.04441180117798406 ['TFRC|p.Y211S|1|0.26|ENSG00000072274|chr3:196071451-196071451|T/G|missense_variant', 'ENSG00000072274|ENST00000360110|TFRC'] 118439 16809 TYPENWRAF True PC9_epitope_Rep4 1182.5458077337798 1182.54470993586 72.628 2 0.027484821029822994 0.006837487165126482 0.044415692535077475 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 39485 16276 HLDLGILYY True H1975_Epitope_Rep3 1105.58079626017 1105.5802749679299 68.073 1 0.02747261551894092 0.006837487165126482 0.04442633610179553 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 85000 12935 QEFRFLPPP True NCI_RA007_Epitope_Rep5 1129.5920296502097 1129.59092993586 56.436 2 0.027468433390076773 0.006837487165126482 0.04442998353832269 ['ENSG00000113369|ENST00000265138|ARRDC3'] 64863 14149 LQDQNTYTL True PC9_epitope_Rep6 1094.52440358286 1094.5233099358602 66.295 2 0.02745638421454633 0.006837487165126482 0.044440493622770375 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 105217 10442 SRIARALAL True PC9_epitope_Rep2 969.6083484206899 969.60724993586 45.486 2 0.027451609758789443 0.006837487165126482 0.0444446587993939 ['ENSG00000142871|ENST00000451137|CCN1'] 137680 5021 YEKDIAAYR True NCI_RA007_Epitope_Rep4 1127.5611234447497 1127.55946490379 25.799 3 0.027447828492931727 0.006837487165126482 0.044447957763708565 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENSG00000164104|ENST00000296503|HMGB2'] 108747 12322 SYSGTFHSL True PC9_epitope_Rep1 997.4505103666099 997.44940993586 52.251 2 0.027440780926540564 0.006837487165126482 0.044454106963905164 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1'] 34653 13662 GQATTAYFL True NCI_RA007_Epitope_Rep4 970.47599683846 970.47544496793 59.772 1 0.027439979000370915 0.006837487165126482 0.04445480671268457 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 39032 4164 HHSDGSVSL True PC9_epitope_Rep1 937.42535824793 937.42426993586 20.913 2 0.027439614925406638 0.006837487165126482 0.0444551244021279 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 36272 16714 GVDVTLPRV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 69.537 2 0.027439329218468225 0.006837487165126482 0.0444553737094872 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 319 17207 AAIAVLEEL True NCI_RA007_Epitope_Rep5 927.5276980581499 927.52660993586 72.96 2 0.027406268751212288 0.006837487165126482 0.04448423020238418 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 72796 22015 MPFAGLISA True PC9_epitope_Rep5 905.46807500705 905.4675249679301 89.707 1 0.02740614770338292 0.006837487165126482 0.04448433588686126 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 6313 5492 APRPPTAAP True PC9_epitope_Rep1 876.4817509252399 876.48064993586 25.954 2 0.027374915890930624 0.006837487165126482 0.044511610865807925 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 22092 12127 ESPINVTTV True PC9_epitope_Rep6 958.49712620586 958.49602993586 57.99 2 0.027370465924873348 0.006837487165126482 0.044515498206118 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 15258 12380 EAEPHPLWEY True H1975_Epitope_Rep3 1269.56660274801 1269.56550993586 52.806 2 0.027348337195687297 0.006837487165126482 0.04453483338279076 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF'] 104553 13813 SQPPVQVSV True PC9_epitope_Rep3 939.5025459394699 939.50144993586 58.211 2 0.027344703541480726 0.006837487165126482 0.04453800899981402 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 117523 4833 TVRSSTSSI True PC9_epitope_Rep6 936.48762415132 936.48652993586 26.098 2 0.027324234375592955 0.006837487165126482 0.044555901521039734 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 137829 11399 YERPVDYLP True NCI_RA007_Epitope_Rep4 1150.5658744720197 1150.56476993586 50.762 2 0.027317055970249103 0.006837487165126482 0.04456217775332829 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 17365 16124 EHDGSLFQAV True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 66.836 2 0.027313613261074066 0.006837487165126482 0.04456518805238095 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 84136 20747 PYCSPPMTF True PC9_epitope_Rep5 1041.42997524617 1041.42947496793 84.862 1 0.027312208080881552 0.006837487165126482 0.0445664167889784 ['ENST00000576921.1_1_16:3072866-3073436:-|nuORF', 'nc|ENSG00000103145|Q9NWW0-2|HCFC1R1', 'ENSG00000103145|ENST00000248089|HCFC1R1'] 124483 6085 VGVNGFGR True NCI_RA007_Epitope_Rep5 804.4242360491198 804.42312993586 30.087 2 0.02729128407038643 0.006837487165126482 0.0445847168343169 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 11607 8473 DGFVALSK True H1975_Epitope_Rep3 835.44396843419 835.44286993586 37.576 2 0.02727593541787565 0.006837487165126482 0.04459814473693512 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 92767 14924 RPADVIFAT True PC9_epitope_Rep3 988.5341804209199 988.53308993586 62.539 2 0.027268859242712086 0.006837487165126482 0.044604336542282644 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 41208 14719 HVLDDFVKV True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 68.563 2 0.027266926882877813 0.006837487165126482 0.04460602752502686 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 93095 7717 RPNPPPVSV True PC9_epitope_Rep2 961.53451477409 961.53340993586 35.06 2 0.02725360354760512 0.006837487165126482 0.04461768807648286 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 133242 9451 VVTGGVQSV True PC9_epitope_Rep5 844.4654321547599 844.4648849679301 41.308 1 0.027228793112177446 0.006837487165126482 0.04463940897998621 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 85729 9654 QHAVGIVV True PC9_epitope_Rep2 821.47593726881 821.47484993586 42.473 2 0.027204424544326106 0.006837487165126482 0.04466075174271965 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 106418 5792 STIKEVAQA True PC9_epitope_Rep1 945.5131106231698 945.51200993586 27.096 2 0.027203617190626465 0.006837487165126482 0.044661458996268485 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 141503 20240 YTLDGGDIINA True PC9_epitope_Rep1 1150.5506183307 1150.5495299358602 82.68 2 0.027194793215189385 0.006837487165126482 0.04466918954407869 ['ENSG00000204628|ENST00000512805|RACK1'] 129044 6284 VQNGKVIGV True PC9_epitope_Rep2 912.5392658013598 912.53816993586 29.568 2 0.02718953740764479 0.006837487165126482 0.04467379461301431 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 32098 10182 GETEDTFIA True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 44.167 1 0.02717133170055113 0.006837487165126482 0.04468974931569475 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 89240 18813 QVVGGIYGV True PC9_epitope_Rep3 890.4861675993399 890.48561496793 77.588 1 0.02716987399210167 0.006837487165126482 0.04469102699727823 ['ENSG00000167658|ENST00000309311|EEF2'] 40455 9687 HRDERVLSL True PC9_epitope_Rep1 1123.60980497267 1123.60816490379 42.117 3 0.027166852620984592 0.006837487165126482 0.04469367532766716 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 78055 7271 NVTTEVKSV True PC9_epitope_Rep1 975.5236753068699 975.52256993586 32.78 2 0.027145726738172376 0.006842619745845552 0.0447121965607463 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 32 4739 AAAAPLGAR True PC9_epitope_Rep3 796.4555361774 796.45442993586 23.318 2 0.027138010197363293 0.006842619745845552 0.04471896333240459 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 32185 5615 GEVTNVTTA True NCI_RA007_Epitope_Rep4 890.4345259493 890.43342993586 28.199 2 0.027135966859275804 0.006842619745845552 0.04472075531682159 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 31652 10257 GEFQSFSSA True NCI_RA007_Epitope_Rep5 958.4032258210199 958.40212993586 46.083 2 0.027128937934469334 0.006842619745845552 0.044726920068025575 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 138105 14443 YGGPVGAGI True PC9_epitope_Rep5 789.4021036222099 789.4015549679301 60.556 1 0.02712834256496667 0.006842619745845552 0.04472744227261717 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 115489 15808 TRPPALLL True PC9_epitope_Rep2 879.5541875895099 879.55308993586 66.066 2 0.02708527385739175 0.006842619745845552 0.044765231943736855 ['ENSG00000090971|ENST00000205194|NAT14'] 119867 8306 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep1 964.4688036634799 964.46770993586 36.309 2 0.027078134438844454 0.006842619745845552 0.044771498873184705 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 37033 9739 GVPENGYQTLY True H1975_Epitope_Rep1 1239.5771674317102 1239.57606993586 42.391 2 0.02707278593677789 0.006842619745845552 0.044776194235059054 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 72265 11369 MHSIGGVQV True PC9_epitope_Rep2 926.4643866089399 926.46328993586 49.052 2 0.027058369889312227 0.006842619745845552 0.044788851918402664 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 71954 13157 MESPFITSP True H1975_Epitope_Rep1 1007.46338354943 1007.46287496793 55.701 1 0.027046086353804108 0.006842619745845552 0.04479963958407878 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 118928 15103 VADPYVVIM True NCI_RA007_Epitope_Rep3 1005.5205045027299 1005.51997496793 66.898 1 0.0270061010749969 0.006842619745845552 0.044834770726889024 ['ENSG00000071894|ENST00000616140|CPSF1'] 41140 7019 HVAKEILL True H1975_Epitope_Rep2 921.5647522732099 921.56364993586 31.924 2 0.027001462279207907 0.006842619745845552 0.0448388478884652 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'nc|ENSG00000170632|Q8N2F6-4|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-3|ARMC10', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10', 'nc|ENSG00000170632|Q8N2F6-6|ARMC10'] 7316 8316 ARNTVTQVL True PC9_epitope_Rep4 1000.5665431783599 1000.56544993586 39.447 2 0.026996461740720807 0.006842619745845552 0.044843243346268616 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 96433 18074 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41156993586 74.536 2 0.026994352905533515 0.006842619745845552 0.04484509711499836 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 87439 10654 QPYM[Oxidation]PTVSA True PC9_epitope_Rep2 1008.4586329025999 1008.45752993586 46.292 2 0.0269825766798921 0.006842619745845552 0.044855450180768745 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 119678 12911 VAVGVIKAV True PC9_epitope_Rep1 854.5589386167799 854.55784993586 54.535 2 0.026979882102351856 0.006842619745845552 0.04485781940183615 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 104840 5601 SRAPDGAAL True PC9_epitope_Rep5 856.4402800360799 856.43918993586 26.548 2 0.02696596702876048 0.006842619745845552 0.04487005598438837 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 25364 8884 FEADPPGQVAA True H1975_Epitope_Rep1 1100.51383889916 1100.51274993586 39.084 2 0.02695507774730037 0.006842619745845552 0.04487963372481668 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 68536 12187 LTGHLEEVVL True NCI_RA007_Epitope_Rep2 1108.61282466444 1108.61172993586 52.003 2 0.02695134327951353 0.006842619745845552 0.044882918798721576 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 53311 6920 KQLEVVHTL True NCI_RA007_Epitope_Rep4 1065.6182443980501 1065.6171499358602 33.237 2 0.0269466696742944 0.006842619745845552 0.044887030283495256 ['nc|ENSG00000014123|O94874-3|UFL1', 'ENSG00000014123|ENST00000369278|UFL1'] 35078 11070 GQVIKGIGV True PC9_epitope_Rep4 869.5334521449298 869.53234993586 50.358 2 0.02692161365781664 0.006842619745845552 0.044909078100169655 ['ENSG00000171497|ENST00000307720|PPID'] 114243 17032 TPMSVLQQA True PC9_epitope_Rep1 973.49026700361 973.48916993586 70.337 2 0.026918681794593818 0.006842619745845552 0.04491165856470766 ['ENSG00000167978|ENST00000301740|SRRM2'] 138660 17928 YIHVHFLEV True PC9_epitope_Rep4 1155.60767971435 1155.60604490379 77.008 3 0.026916615246739724 0.006842619745845552 0.044913477501578515 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 141809 11138 YVDDGLIS True NCI_RA007_Epitope_Rep2 880.4178132559999 880.41726496793 47.905 1 0.02690241729064891 0.006842619745845552 0.044925975960364226 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 128444 20371 VPSAVLIVA True PC9_epitope_Rep1 867.5429541994699 867.5424049679301 83.182 1 0.02690206780147925 0.006842619745845552 0.04492628365268159 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 73163 6354 MRSPQMVSA True PC9_epitope_Rep6 1005.47357139365 1005.47246993586 33.015 2 0.026894557342607057 0.006842619745845552 0.04493289633499184 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 129337 11063 VQYNEPLKV True PC9_epitope_Rep6 1088.5866099165999 1088.58550993586 53.472 2 0.026894412336307155 0.006842619745845552 0.04493302401578646 ['ENSG00000148843|ENST00000369797|PDCD11'] 128445 20304 VPSAVLIVA True PC9_epitope_Rep5 867.5429541994699 867.54184993586 83.144 2 0.02688278038228541 0.006842619745845552 0.04494326717014995 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 137018 22821 YALDLSTFL True PC9_epitope_Rep4 1041.53826274185 1041.5371699358602 96.003 2 0.026876068061023564 0.006842619745845552 0.04494917896988261 ['ENSG00000137331|ENST00000259874|IER3'] 142432 13204 YYFEGIKQTF True NCI_RA007_Epitope_Rep4 1294.6233893481397 1294.6222899358602 57.911 2 0.026871772309104664 0.006842619745845552 0.04495296274867692 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 30666 6518 GALALEEK True PC9_epitope_Rep2 829.4545331178899 829.45342993586 30.488 2 0.02687054357016193 0.006842619745845552 0.044954045094449814 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 11916 10250 DHLPNAAL True PC9_epitope_Rep4 849.43446637965 849.43336993586 47.109 2 0.026856652677866646 0.006842619745845552 0.04496628254330544 ['ENSG00000101577|ENST00000677752|LPIN2'] 5192 19095 ALMPVLNQV True PC9_epitope_Rep6 983.54738795691 983.54628993586 86.097 2 0.02684273945660316 0.006842619745845552 0.04497854248384925 ['ENSG00000223496|ENST00000435634|EXOSC6'] 18101 14916 EIIDLVLDR True H1975_Epitope_Rep3 1084.61282466444 1084.61172993586 62.76 2 0.026838497008665103 0.006842619745845552 0.044982281371705866 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 74755 14738 NHASLISAL True PC9_epitope_Rep2 924.50288029264 924.5023349679301 61.956 1 0.02683213053792613 0.006842619745845552 0.04498789266266901 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 98182 7881 SETANYISA True H1975_Epitope_Rep2 954.42944056886 954.4288949679301 35.26 1 0.026829846211987692 0.006842619745845552 0.04498990616992394 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2', 'ENST00000469038.1_1_3:49011147-49012531:+|nuORF', 'ENST00000465217.1_1_3:49008110-49012121:+|nuORF'] 134348 7622 VYPEKLATKF True NCI_RA007_Epitope_Rep3 1194.6648602372995 1194.66322490379 37.109 3 0.02681548136892974 0.006842619745845552 0.04500256973071345 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 41374 15996 HYALNTWLF True NCI_RA007_Epitope_Rep3 1163.57637958607 1163.5752899358602 70.594 2 0.026808810387405988 0.006842619745845552 0.04500845166645295 ['ENSG00000170881|ENST00000303545|RNF139'] 5679 14144 APAGIPAVA True PC9_epitope_Rep3 765.43848913093 765.4379449679301 59.489 1 0.026793954843467728 0.006842619745845552 0.045021552424896166 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 72794 21086 MPFAGLISA True PC9_epitope_Rep4 905.46807500705 905.4675249679301 89.269 1 0.026791554611025604 0.006842619745845552 0.045023669436196935 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 93034 11228 RPLLKAITA True PC9_epitope_Rep3 981.63350053937 981.63240993586 48.196 2 0.02677636766300818 0.006842619745845552 0.04503706631301446 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 1720 5584 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 26.483 2 0.026775832647564307 0.006842619745845552 0.045037538328073126 ['ENSG00000161847|ENST00000617231|RAVER1'] 71772 4803 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 23.563 2 0.026760364598855692 0.006842619745845552 0.0450511867535563 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 98688 7078 SGEVLVNVK True NCI_RA007_Epitope_Rep2 943.53384606775 943.53274993586 32.156 2 0.02673969326237359 0.006842619745845552 0.045069431817416274 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 64022 11640 LPAEAVEAA True PC9_epitope_Rep1 869.4494477374499 869.44834993586 49.652 2 0.026737827189612914 0.006842619745845552 0.045071079169192785 ['ENSG00000130706|ENST00000253003|ADRM1'] 88005 11304 QRNPQGFVL True PC9_epitope_Rep6 1057.5668775315298 1057.56578993586 54.499 2 0.026727486675230092 0.006842619745845552 0.04508020860117389 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 121823 16778 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 69.543 2 0.026717800789375596 0.006842619745845552 0.045088761491052856 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 114259 11793 TPNRATFVV True PC9_epitope_Rep1 1003.5450794577899 1003.5439899358599 50.232 2 0.02671481295600876 0.006842619745845552 0.04509140010235597 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 13938 10244 DRAGSIVL True PC9_epitope_Rep6 829.46576650793 829.46466993586 50.066 2 0.026713209983558396 0.006842619745845552 0.0450928157709233 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 95056 10992 RTSTGIIGV True PC9_epitope_Rep5 902.5185303567799 902.51742993586 47.269 2 0.026708706924727273 0.006842619745845552 0.04509679285780235 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 107482 6725 SVMRPEQIMK True NCI_RA007_Epitope_Rep4 1217.6260492837698 1217.62441490379 32.491 3 0.02670596435944674 0.006842619745845552 0.045099215227632834 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 20684 20324 EQDQSVLVL True PC9_epitope_Rep1 1029.5342399905699 1029.53367496793 83.005 1 0.026696742067147235 0.006842619745845552 0.04510736161994973 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 138343 10615 YHEPRSFEV True PC9_epitope_Rep5 1162.54072235334 1162.5390749037902 45.818 3 0.026677334521948058 0.006842619745845552 0.04512450908165721 ['nc|ENSG00000160953|Q2TAK8-2|PWWP3A', 'ENST00000587460.5_1_19:1358605-1376572:+|nuORF', 'ENSG00000160953|ENST00000591337|PWWP3A', 'nc|ENSG00000160953|Q2TAK8-3|PWWP3A', 'ENST00000591433.5_1_19:1358605-1371443:+|nuORF'] 107859 15679 SVVGSNQLIEA True PC9_epitope_Rep4 1115.58225281215 1115.5811499358601 68.235 2 0.026669972395043224 0.006842619745845552 0.04513101530014301 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 73299 18628 MTDLYPPELF True H1975_Epitope_Rep3 1224.5736622744 1224.5725699358602 78.114 2 0.02666829844617012 0.006842619745845552 0.04513249474905599 ['ENSG00000148291|ENST00000371964|SURF2'] 34824 17304 GQIEVVPEV True PC9_epitope_Rep6 968.5178616504398 968.51731496793 79.166 1 0.02666119841231498 0.006842619745845552 0.04513877026882046 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 104841 5693 SRAPDGAAL True PC9_epitope_Rep5 856.4402800360799 856.43918993586 26.894 2 0.026658520369315722 0.006842619745845552 0.04514113750685366 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 18904 12748 ELEDNLLY True H1975_Epitope_Rep2 1007.4811417885498 1007.48004993586 54.138 2 0.02665248387676398 0.006842619745845552 0.04514647380807221 ['ENSG00000039139|ENST00000265104|DNAH5', 'nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant'] 59466 8518 LFQEREHVLRL True NCI_RA007_Epitope_Rep5 1438.80448202794 1438.80283490379 39.448 3 0.026647255088721254 0.006842619745845552 0.045151096523326495 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 108287 20088 SYILRPVAF True PC9_epitope_Rep1 1064.60186605792 1064.6007699358602 82.097 2 0.026645300308538535 0.006842619745845552 0.04515282482606857 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant'] 133856 20556 VYGPLPQSF True PC9_epitope_Rep1 1006.5123823471798 1006.51187496793 83.881 1 0.026627741270405722 0.006842619745845552 0.04516835200857353 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 31527 7492 GEDLNKWQA True H1975_Epitope_Rep2 1059.4985231881901 1059.49742993586 33.768 2 0.02662599296615928 0.006842619745845552 0.04516989825334961 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 507 6531 AAPAEEPAAAA True PC9_epitope_Rep5 967.4610750503098 967.45996993586 30.094 2 0.026624941417910126 0.006842619745845552 0.04517082829090626 ['ENSG00000277443|ENST00000612661|MARCKS'] 93098 8664 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 38.276 2 0.026616770720939768 0.006842619745845552 0.04517805538127217 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 114751 8571 TQKSLSLSLG True NCI_RA007_Epitope_Rep3 1032.5815245361598 1032.5804299358601 40.786 2 0.02661514814443178 0.006842619745845552 0.04517949068797245 ['nc|ENSG00000211892|P01861-1|IGHG4'] 57510 12122 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49568993586 51.711 2 0.026614930537568145 0.006842619745845552 0.04517968318264836 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 130232 22214 VSFGDFVQV True PC9_epitope_Rep1 996.4916469025999 996.49054993586 90.268 2 0.026600984273809802 0.006842619745845552 0.045192021468817706 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 7143 10030 AQYDRQIRL True PC9_epitope_Rep1 1161.6254550368099 1161.62380490379 43.448 3 0.026598857718032113 0.006842619745845552 0.04519390308665558 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 139423 20144 YLPELLQTV True PC9_epitope_Rep6 1074.5961119711399 1074.5950099358602 90.156 2 0.026598592064214874 0.006842619745845552 0.04519413814695687 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 34932 4687 GQNPTNAEVLK True NCI_RA007_Epitope_Rep3 1169.6040508858898 1169.6029499358601 25.382 2 0.0265900297805373 0.006842619745845552 0.045201714924199624 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 93704 5229 RQVLHGEAL True NCI_RA007_Epitope_Rep4 1021.5668775315298 1021.56578993586 26.651 2 0.026581353157393618 0.006842619745845552 0.04520939397429516 ['ENSG00000124217|ENST00000244051|MOCS3'] 99980 9066 SIPGGPVRL True H1975_Epitope_Rep1 894.52870111766 894.52760993586 39.781 2 0.026579396352960014 0.006842619745845552 0.04521112595218724 ['CON__P12763'] 36276 17151 GVDVTLPRV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 70.993 2 0.02657595093442896 0.006842619745845552 0.045214175646356665 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 69553 13565 LVDDPLEY True H1975_Epitope_Rep3 962.4596780679799 962.45858993586 57.46 2 0.02656701637186087 0.006842619745845552 0.04522208483653763 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 53105 6597 KPSESIYSA True PC9_epitope_Rep5 980.48147614172 980.48036993586 30.346 2 0.026550489578914555 0.006842619745845552 0.04523671801473909 ['nc|ENSG00000189057|Q6SJ93-2|FAM111B', 'ENSG00000189057|ENST00000343597|FAM111B'] 57532 9816 LEDPSQLPP True H1975_Epitope_Rep2 994.49712620586 994.49602993586 42.741 2 0.02654878182376225 0.006842619745845552 0.045238230325689174 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 111231 4613 THITAQTAV True PC9_epitope_Rep6 940.4977949122 940.49668993586 25.046 2 0.026548735428383697 0.006842619745845552 0.045238271411939486 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 105322 13765 SRPLSFHVL True PC9_epitope_Rep2 1054.59236400338 1054.59126993586 58.233 2 0.026542834184583513 0.006842619745845552 0.04524349761980857 ['ENST00000482540.1_1_7:8110532-8125911:+|nuORF'] 108869 12904 TAAGAVFL True H1975_Epitope_Rep2 748.41194002992 748.41139496793 54.747 1 0.0265390787318644 0.006842619745845552 0.045246823756269046 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 33157 11253 GIVEFASK True PC9_epitope_Rep3 849.45961849833 849.45852993586 48.291 2 0.026508031213687503 0.006842619745845552 0.04527432988682175 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 105214 15495 SRHPFLTAL True PC9_epitope_Rep5 1040.5767139392399 1040.57560993586 64.61 2 0.02650040126484232 0.006842619745845552 0.04528109169675768 ['nc|ENSG00000142208|P31749-2|AKT1', 'ENSG00000142208|ENST00000649815|AKT1'] 63821 14164 LNIPVREVP True PC9_epitope_Rep6 1035.6076797143498 1035.60658993586 66.355 2 0.026477360693609165 0.006842619745845552 0.045301515874089995 ['nc|ENSG00000007516|O94812-5|BAIAP3', 'nc|ENSG00000007516|O94812-3|BAIAP3', 'ENSG00000007516|ENST00000426824|BAIAP3', 'nc|ENSG00000007516|O94812-2|BAIAP3', 'nc|ENSG00000007516|O94812|BAIAP3'] 141510 20176 YTLDGGDIINA True PC9_epitope_Rep5 1150.5506183307 1150.5495299358602 82.655 2 0.02646535332146239 0.006842619745845552 0.04531216281841578 ['ENSG00000204628|ENST00000512805|RACK1'] 75428 13707 NIVPVIAKA True PC9_epitope_Rep3 923.5804023373499 923.57930993586 57.805 2 0.02645425515150297 0.006842619745845552 0.04532200545008914 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 115181 6050 TRDPQFQKL True PC9_epitope_Rep4 1131.6036569630699 1131.6020249037902 30.266 3 0.026440214310903074 0.006842619745845552 0.04533446043215038 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 115320 13776 TRIDLIQKL True PC9_epitope_Rep4 1098.67609362734 1098.6749899358601 60.886 2 0.026434511940674598 0.006842619745845552 0.04533951956625297 ['ENSG00000170677|ENST00000397942|SOCS6'] 78207 20664 NYFIPSHYF True PC9_epitope_Rep1 1186.54474510462 1186.54364993586 84.306 2 0.026413763075372895 0.006842619745845552 0.045357931947580934 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'nc|ENSG00000146414|Q149N8-5|SHPRH'] 53779 7396 KTAENFRAL True PC9_epitope_Rep5 1048.5665431783598 1048.5654499358602 33.406 2 0.02638387351235643 0.006842619745845552 0.04538446680107703 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000289549|F5H284|PPIAL4D', 'nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000279782|ENST00000581138|PPIAL4F', 'ENSG00000271567|ENST00000581164|PPIAL4E', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A', 'ENST00000492149.1_1_10:81107262-81109515:+|nuORF', 'nc|ENSG00000108179|P30405-2|PPIF', 'ENSG00000236334|ENST00000419275|PPIAL4G', 'ENSG00000171497|ENST00000307720|PPID', 'ENSG00000108179|ENST00000225174|PPIF'] 1232 8751 AEDEAAALP True H1975_Epitope_Rep3 885.4079768482899 885.4074249679301 38.665 1 0.026375459229861127 0.006842619745845552 0.045391939052901176 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 44721 22266 ILVQVIPVV True PC9_epitope_Rep2 978.6477536211798 978.64664993586 91.125 2 0.026370881319727434 0.006842619745845552 0.04539600487372593 ['nc|ENSG00000117595|O14896-2|IRF6', 'ENSG00000117595|ENST00000367021|IRF6'] 18244 16988 EIPLTLHSV True PC9_epitope_Rep2 1007.56514619603 1007.56404993586 70.594 2 0.02636577453455127 0.006842619745845552 0.045400540771614706 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 129311 21426 VQWENSFVSV True PC9_epitope_Rep5 1193.57168812845 1193.57117496793 87.478 1 0.026356426249020102 0.006842619745845552 0.04540884500316698 ['ENSG00000174231|ENST00000304992|PRPF8'] 107932 22235 SVVTSIFGV True PC9_epitope_Rep2 907.5014833103099 907.5009349679301 91.005 1 0.02635377260820464 0.006842619745845552 0.045411202508197065 ['ENSG00000196305|ENST00000443024|IARS1'] 4506 6125 AKDPFAHLPK True NCI_RA007_Epitope_Rep4 1122.6185787512197 1122.61693490379 30.172 3 0.02635152428538103 0.006842619745845552 0.045413200007904414 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant', 'ENST00000434365.1_1_X:114937583-114938135:+|nuORF'] 96398 7005 SAAAALVLK True NCI_RA007_Epitope_Rep3 842.52255310806 842.52144993586 34.663 2 0.026347174687959465 0.006842619745845552 0.045417064574184096 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 47264 12523 IVDEAIYY True H1975_Epitope_Rep2 984.4804135125601 984.4798649679301 53.263 1 0.026310021619757804 0.006842619745845552 0.04545008594460144 ['ENSG00000111229|ENST00000228825|ARPC3'] 114792 18395 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 76.087 2 0.026296623264204826 0.006842619745845552 0.04546199927006897 ['ENSG00000119616|ENST00000341162|FCF1'] 23748 14399 EYGKFFVTL True NCI_RA007_Epitope_Rep3 1102.5698972233 1102.5688099358601 63.955 2 0.026286094864744716 0.006842619745845552 0.045471362583730045 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 53117 12668 KPTETLLNTV True PC9_epitope_Rep4 1114.62338934814 1114.6222899358602 56.573 2 0.02628418600126438 0.006842619745845552 0.0454730603841505 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 137433 4867 YEDESSRVGP True H1975_Epitope_Rep3 1137.49383173057 1137.49272993586 23.846 2 0.026283281633641773 0.006842619745845552 0.04547386477449693 ['EDRF1|p.G645V|1|0.09|ENSG00000107938|chr10:125738398-125738398|G/T|missense_variant'] 37850 21393 GYMEGYYTF True PC9_epitope_Rep1 1129.44264810485 1129.44207496793 87.122 1 0.026273926894596993 0.006842619745845552 0.04548218605703319 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 35801 17515 GTINNLIHV True PC9_epitope_Rep1 979.5450794577899 979.5439899358599 72.165 2 0.02627051487419433 0.006842619745845552 0.045485221457083294 ['nc|ENSG00000131791|O43741-2|PRKAB2', 'ENSG00000131791|ENST00000254101|PRKAB2'] 39230 17248 HIIENIVAV True PC9_epitope_Rep2 1006.58113061334 1006.58057496793 71.605 1 0.026260912718527485 0.006842619745845552 0.045493764639337124 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 142309 14566 YYDPKHVIF True PC9_epitope_Rep2 1180.59169529704 1180.5905899358602 61.297 2 0.026252893044011648 0.006842619745845552 0.04550090090127515 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 115491 16715 TRPPALLL True PC9_epitope_Rep5 879.5541875895099 879.55308993586 69.3 2 0.026245160587862894 0.006842619745845552 0.045507782477391644 ['ENSG00000090971|ENST00000205194|NAT14'] 21115 17233 ERADPLFL True PC9_epitope_Rep4 959.5076313199099 959.50652993586 74.294 2 0.026238818350384715 0.006842619745845552 0.04551342746969853 ['ENSG00000198060|ENST00000358935|MARCHF5'] 37538 14410 GVVGEVTQV True PC9_epitope_Rep2 886.47599683846 886.47488993586 60.695 2 0.02622575280640091 0.006842619745845552 0.04552505849093885 ['ENSG00000059378|ENST00000263549|PARP12', 'PARP12|p.Q445Sfs*10|1|0.14|ENSG00000059378|chr7:140034323-140034324|-/A|frameshift_variant', 'PARP12|p.C457Lfs*48|1|0.1|ENSG00000059378|chr7:140034286-140034287|-/A|frameshift_variant'] 76532 22648 NQIPGLIWI True PC9_epitope_Rep4 1052.60186605792 1052.6007699358602 95.346 2 0.026212552567373995 0.006842619745845552 0.04553681196347498 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 90181 2950 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 15.589 2 0.026200129511109612 0.006842619745845552 0.045547875770570075 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 38043 11760 HASDRIIAL True PC9_epitope_Rep3 994.5559784946599 994.55488993586 50.255 2 0.026185580128359823 0.006842619745845552 0.04556083613687318 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 1406 5996 AEEEPSTSATV True H1975_Epitope_Rep2 1119.49316302423 1119.4925749679298 28.042 1 0.026183640390090426 0.006842619745845552 0.04556256426074686 ['ENSG00000100023|ENST00000398831|PPIL2', 'ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 108644 10642 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59198993586 45.922 2 0.026165872077544197 0.006842619745845552 0.04557839672333251 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 127676 9990 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.4914349679301 43.756 1 0.02616001817424231 0.006842619745845552 0.04558361386204342 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 86738 19540 QLLDLDPEV True PC9_epitope_Rep6 1040.5389910178399 1040.5378899358602 87.825 2 0.026144716803742293 0.006842619745845552 0.0455972531874436 ['ENSG00000113384|ENST00000265070|GOLPH3'] 17620 5987 EHINSVSAM True PC9_epitope_Rep6 986.44913046762 986.44802993586 31.348 2 0.026130289511165004 0.006848520023215322 0.045610116528846 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 72005 6593 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39475496793 30.27 1 0.026128012119368306 0.006848520023215322 0.04561214732573646 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 130812 20190 VTAPSGILDV True PC9_epitope_Rep2 970.53351171458 970.5329649679301 83.077 1 0.02611648775725489 0.006848520023215322 0.04562242500414802 ['ENSG00000162063|ENST00000397066|CCNF'] 64823 11852 LQDEANYHL True PC9_epitope_Rep5 1101.50908787189 1101.50798993586 50.587 2 0.026113192600069824 0.006848520023215322 0.04562536405631248 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 1126 7700 AEAPPAYTP True H1975_Epitope_Rep3 915.4337976733101 915.43324496793 34.599 1 0.02610703799047065 0.006848520023215322 0.04563085396956394 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 38503 6663 HERAIDFSP True NCI_RA007_Epitope_Rep5 1070.5145076055 1070.5134099358602 32.298 2 0.02610223609938078 0.006848520023215322 0.045635137644251166 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 110995 14673 THASQIELL True PC9_epitope_Rep1 1010.5396597241798 1010.53856993586 61.262 2 0.0260963212198812 0.006848520023215322 0.045640414660395916 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'MAD2L1BP|p.E35Q|1|0.07|ENSG00000124688|chr6:43636437-43636437|G/C|missense_variant', 'MAD2L1BP|p.G248Afs*20|1|0.1|ENSG00000124688|chr6:43640450-43640450|G/-|frameshift_variant', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 13930 12296 DRAGSIVL True PC9_epitope_Rep1 829.46576650793 829.46466993586 52.152 2 0.02609114922415878 0.006848520023215322 0.04564502932717583 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 40437 10735 HRAPIFMRV True PC9_epitope_Rep2 1125.62295293901 1125.6213149037899 46.611 3 0.026025067553676843 0.006848520023215322 0.04570402472392777 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 88891 21081 QVEEELFSV True PC9_epitope_Rep5 1078.51825557326 1078.51767496793 86.15 1 0.026023666711228893 0.006848520023215322 0.045705276042129116 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 78629 12042 NYTARFSRF True PC9_epitope_Rep5 1160.57269118796 1160.5710449037902 51.313 3 0.026013594265368638 0.006848520023215322 0.04571427421729207 ['ENSG00000144231|ENST00000272645|POLR2D'] 125323 8350 VIPELNGK True PC9_epitope_Rep2 868.50181766348 868.50072993586 37.488 2 0.026008107547076442 0.006848520023215322 0.04571917638095528 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 31814 10213 GEILKKIIP True NCI_RA007_Epitope_Rep4 1009.6535672776099 1009.65246993586 46.14 2 0.02599694933621192 0.006848520023215322 0.04572914716319451 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 54380 12768 KYFDEHYEY True PC9_epitope_Rep5 1292.53496826656 1292.53333490379 54.121 3 0.02599653189403251 0.006848520023215322 0.04572952021778558 ['ENSG00000123975|ENST00000314355|CKS2'] 107212 15062 SVIQGHQIIAV True PC9_epitope_Rep2 1163.66625721963 1163.6651699358601 63.193 2 0.025966021192154284 0.006848520023215322 0.04575679359064513 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 84284 19372 PYPPPPPEF True PC9_epitope_Rep5 1039.5014833103098 1039.50038993586 79.561 2 0.0259654822443651 0.006848520023215322 0.04575727547669725 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 21123 7981 ERANGMEL True PC9_epitope_Rep1 918.4229157197799 918.42180993586 35.521 2 0.025959266126633483 0.006848520023215322 0.04576283376466245 ['nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'nc|ENSG00000164548|Q13595-2|TRA2A', 'ENST00000494255.5_1_7:23547037-23556014:-|nuORF'] 43798 7546 IHQETATVL True PC9_epitope_Rep4 1010.53965972418 1010.53856993586 36.395 2 0.025955965874077478 0.006848520023215322 0.04576578499433824 ['ENSG00000164002|ENST00000415550|EXO5'] 114095 21369 TPFTGPFISV True PC9_epitope_Rep4 1064.55424715916 1064.5531499358601 90.363 2 0.02593751607839241 0.006848520023215322 0.04578228655989808 ['ENSG00000164142|ENST00000435205|FHIP1A'] 105577 5809 SSDKGRLCYY True H1975_Epitope_Rep3 1190.53900810118 1190.53735490379 27.367 3 0.02589995856761491 0.006848520023215322 0.045815893625092946 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 39042 11230 HHSGNTYFL True PC9_epitope_Rep1 1074.48829285766 1074.4871899358602 48.076 2 0.025896729622449745 0.006848520023215322 0.04581878390712111 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 32037 13112 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.49187496793 55.556 1 0.02589173254900376 0.006848520023215322 0.04582325717269577 ['ENSG00000051523|ENST00000261623|CYBA'] 24768 7736 FASHVSPEV True PC9_epitope_Rep6 971.47124581119 971.47014993586 39.113 2 0.025890870746110285 0.006848520023215322 0.04582402867607966 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 54748 9961 KYMPNVKVAVF True NCI_RA007_Epitope_Rep3 1294.7107648838999 1294.7096699358601 46.267 2 0.025878819405396793 0.006848520023215322 0.04583481842647936 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 41 16350 AAAAVIPTV True PC9_epitope_Rep4 811.48035394291 811.47980496793 70.855 1 0.02584289425017082 0.006848520023215322 0.04586699546867255 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 60522 7554 LHDDRGPVL True PC9_epitope_Rep5 1020.5352430500799 1020.53414993586 34.006 2 0.02584207900568363 0.006848520023215322 0.045867725878483055 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 142129 20194 YVPPELITL True PC9_epitope_Rep6 1043.59029831471 1043.58920993586 90.348 2 0.025822482719273284 0.006848520023215322 0.04588528591544817 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 86476 6054 QKSLSLSPG True NCI_RA007_Epitope_Rep1 915.5025459394699 915.50144993586 27.587 2 0.02580499677918373 0.006848520023215322 0.04590095967198607 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 7930 4792 ATAPPGVLK True NCI_RA007_Epitope_Rep3 852.50690304392 852.50580993586 25.816 2 0.025792551506744803 0.006848520023215322 0.04591211790499651 ['ENSG00000105538|ENST00000222145|RASIP1'] 141991 19954 YVITDLTQL True PC9_epitope_Rep6 1064.57537652656 1064.5748749679299 89.415 1 0.025786397381006885 0.006848520023215322 0.045917636440125316 ['ENSG00000134070|ENST00000256458|IRAK2'] 108174 20482 SYGDILHVI True PC9_epitope_Rep2 1015.53384606775 1015.53274993586 84.214 2 0.02577875939336845 0.006848520023215322 0.04592448636256432 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 4527 7010 AKHLTPVTL True NCI_RA007_Epitope_Rep4 978.58621599378 978.58510993586 33.591 2 0.025773327237000872 0.006848520023215322 0.04592935856856182 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF', 'nc|ENSG00000006534|P43353-2|ALDH3B1', 'ENSG00000006534|ENST00000342456|ALDH3B1', 'ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 73019 18758 MRASSFLIV True PC9_epitope_Rep4 1022.5582869937799 1022.5577749679301 80.235 1 0.025770438753451377 0.006848520023215322 0.045931949482524805 ['PI3|p.T34Lfs*47|1|0.32|ENSG00000124102|chr20:45175881-45175881|A/-|frameshift_variant', 'ENSG00000124102|ENST00000243924|PI3'] 121982 9316 VFTSRSAAF True PC9_epitope_Rep6 984.5028802926398 984.50178993586 46.001 2 0.02573998602565012 0.006848520023215322 0.045959272480771605 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 6177 9659 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51397496793 42.103 1 0.025739966499183153 0.006848520023215322 0.04595929000482728 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 29634 18990 FVINVVNRL True PC9_epitope_Rep4 1072.6393141958 1072.63820993586 81.137 2 0.02572696960764532 0.006848520023215322 0.04597095533193639 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 141505 19978 YTLDGGDIINA True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 82.247 2 0.025723665228481837 0.006848520023215322 0.04597392156655657 ['ENSG00000204628|ENST00000512805|RACK1'] 138519 9087 YHTDTTVKF True PC9_epitope_Rep1 1110.53457434374 1110.53346993586 39.805 2 0.025711401933704185 0.006848520023215322 0.045984931339667266 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant'] 106372 22523 STIANVWLV True PC9_epitope_Rep1 1001.55458151233 1001.55348993586 91.436 2 0.025706210944657793 0.006848520023215322 0.04598959238816954 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 90212 3810 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 19.748 2 0.025697296022309298 0.006848520023215322 0.045997598127178255 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 58387 7622 LENMPSAEA True H1975_Epitope_Rep2 960.4222470134399 960.42114993586 34.271 2 0.025683038869681967 0.006848520023215322 0.046010403710728176 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 34920 8119 GQNPTEAEL True NCI_RA007_Epitope_Rep1 957.44033960573 957.4397949679301 35.579 1 0.025680044557152237 0.006848520023215322 0.04601309354347676 ['CALM1|p.D134Vfs*15|1|0.08|ENSG00000198668|chr14:90404493-90404494|-/TGTGGGGA|frameshift_variant', 'ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALML3|p.R50W|1|0.13|ENSG00000178363|chr10:5525233-5525233|C/T|missense_variant', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 35681 15543 GTELGNELFY True H1975_Epitope_Rep2 1141.5291546101298 1141.52857496793 64.941 1 0.025662423587167343 0.006848520023215322 0.04602892538880535 ['ENSG00000126821|ENST00000247225|SGPP1'] 128495 15676 VPSPGLPVSA True PC9_epitope_Rep4 922.5123823471799 922.51128993586 68.224 2 0.02565898373873444 0.006848520023215322 0.04603201651115539 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 116415 7051 TTISKVSQV True PC9_epitope_Rep5 961.5444107514498 961.54330993586 32.09 2 0.025656033610847923 0.006848520023215322 0.04603466769921298 ['ENSG00000065183|ENST00000349139|WDR3'] 32480 17356 GGDDSFNTF True PC9_epitope_Rep1 958.3668403123 958.36574993586 71.57 2 0.02564518936270425 0.006848520023215322 0.046044414191988445 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 34754 20318 GQFGVGFYSA True PC9_epitope_Rep2 1031.4712458111896 1031.4706749679299 83.578 1 0.0256312382126607 0.006848520023215322 0.04605695563205797 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 92209 22836 RLIALLEVL True PC9_epitope_Rep5 1038.68011637862 1038.6790099358602 92.834 2 0.02562385575531802 0.006848520023215322 0.04606359328382581 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 106425 5788 STIKEVAQA True PC9_epitope_Rep5 945.5131106231698 945.51200993586 27.256 2 0.02559131493916933 0.006848520023215322 0.04609286070115331 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 8883 14630 AVFPSIVG True H1975_Epitope_Rep2 788.4432401582 788.44269496793 61.433 1 0.025586317802849 0.006848520023215322 0.0460973565434112 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 104417 11230 SQLEEGKPGYL True PC9_epitope_Rep2 1219.6084675599898 1219.60736993586 48.524 2 0.025586222850197696 0.006848520023215322 0.04609744197433999 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 126773 21609 VLPGVDALSNI True PC9_epitope_Rep2 1096.61282466444 1096.61172993586 88.594 2 0.02557414110199878 0.006848520023215322 0.04610831326851777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 5645 10417 APAAATVAV True PC9_epitope_Rep5 769.4334037504899 769.43230993586 45.054 2 0.0255677657131221 0.006848520023215322 0.04611405078548153 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 74747 7295 NHAPSVQI True PC9_epitope_Rep2 864.44536541652 864.44426993586 33.445 2 0.02556769354062025 0.006848520023215322 0.046114115740402584 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 118584 22036 TYQVLAVTF True PC9_epitope_Rep5 1040.5542471591598 1040.55367496793 89.788 1 0.025555172250924015 0.006848520023215322 0.046125386009355195 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 34671 19903 GQDGLYIGV True PC9_epitope_Rep2 920.4603467743199 920.45924993586 81.952 2 0.02554725912688329 0.006848520023215322 0.04613250971669203 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 1323 7431 AEDSPAIGP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 33.562 2 0.025529208064293596 0.006848520023215322 0.046148763462466845 ['ENSG00000012174|ENST00000379484|MBTPS2'] 47862 10907 IYIAGHPAF True NCI_RA007_Epitope_Rep1 987.51780208079 987.51670993586 46.417 2 0.025528923540465077 0.006848520023215322 0.04614901969526422 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 92073 4412 RKVKSTITL True NCI_RA007_Epitope_Rep4 1044.66552894364 1044.6644299358602 23.328 2 0.025507666014937994 0.006848520023215322 0.046168166909580456 ['FABP9|p.D77V|1|0.19|ENSG00000205186|chr8:81459181-81459181|T/A|missense_variant', 'FABP4|p.G89V|1|0.68|ENSG00000170323|chr8:81479496-81479496|C/A|missense_variant', 'FABP9|p.M114Nfs*6|1|0.53|ENSG00000205186|chr8:81458609-81458610|-/T|frameshift_variant', 'ENSG00000205186|ENST00000379071|FABP9', 'ENSG00000170323|ENST00000256104|FABP4'] 64859 16280 LQDQNTYTL True PC9_epitope_Rep1 1094.52440358286 1094.5233099358602 67.44 2 0.025493633233481944 0.006848520023215322 0.046180810268754924 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 134174 18129 VYLPNINKI True PC9_epitope_Rep2 1072.62808080576 1072.6269899358601 75.035 2 0.02549296575057955 0.006848520023215322 0.046181411735011973 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 91854 2597 RKKKREQEL True NCI_RA007_Epitope_Rep5 1213.7255034312495 1213.72384490379 14.707 3 0.02548928165365135 0.006848520023215322 0.0461847315790674 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 32589 13830 GGHGPSFPL True PC9_epitope_Rep1 867.42390169595 867.42280993586 58.04 2 0.025487302006626848 0.006848520023215322 0.04618651557799374 ['ENSG00000079246|ENST00000392132|XRCC5'] 23107 16510 EVISKLYAV True PC9_epitope_Rep1 1020.5855472874398 1020.58444993586 68.329 2 0.02547396014511206 0.006848520023215322 0.0461985403783767 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 1243 6713 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.4074249679301 30.778 1 0.025465938652098907 0.006848520023215322 0.04620577128594352 ['ENSG00000162783|ENST00000367577|IER5'] 96691 18337 SALDTITTV True PC9_epitope_Rep4 919.48622716899 919.4856749679301 78.601 1 0.025450159725368765 0.006848520023215322 0.0462199978457992 ['ENSG00000138160|ENST00000260731|KIF11'] 97077 12689 [Acetylation]-SDFDEFER True H1975_Epitope_Rep3 1085.43016916115 1085.42957496793 54.018 1 0.025444376887204065 0.006848520023215322 0.04622521267782253 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.Q10H|1|0.07|ENSG00000063244|chr19:55655134-55655134|G/T|missense_variant', 'U2AF2|p.L11F|1|0.08|ENSG00000063244|chr19:55655135-55655135|C/T|missense_variant'] 126788 22127 VLPLRGFLGI True PC9_epitope_Rep1 1083.68045073179 1083.67934993586 89.925 2 0.025436154506486557 0.006848520023215322 0.046232628286116836 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 28593 13935 FSGPAITL True H1975_Epitope_Rep1 804.43815477776 804.43760496793 58.756 1 0.025401373901291546 0.006848520023215322 0.046264007321280845 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 24430 8010 FADKHIQVL True NCI_RA007_Epitope_Rep4 1069.59202965021 1069.59092993586 37.577 2 0.025400048430055888 0.006848520023215322 0.04626520351470054 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 5907 7690 APGLPTARA True PC9_epitope_Rep5 852.4817509252399 852.48064993586 34.523 2 0.025389221154730152 0.006848520023215322 0.046274975742498226 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 103193 19422 SPILVATAV True PC9_epitope_Rep3 869.52221875489 869.52112993586 79.933 2 0.02537696550917005 0.006848520023215322 0.0462860392499562 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 34218 8832 GNLANVIR True PC9_epitope_Rep2 855.49264996211 855.49154993586 39.324 2 0.02535103894149063 0.006848520023215322 0.04630945120540126 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENST00000418448.1_1_13:57888978-57889152:+|nuORF', 'ENSG00000169100|ENST00000381401|SLC25A6'] 26356 8005 FHSGDDSQVL True PC9_epitope_Rep6 1103.48835242731 1103.48724993586 40.261 2 0.02534874698083031 0.006848520023215322 0.0463115213483501 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 17558 11442 EHGPENIVM True PC9_epitope_Rep3 1024.46478053176 1024.4636899358602 49.011 2 0.02534860264517305 0.006848520023215322 0.04631165171769661 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 107822 16733 SVVADTPEL True PC9_epitope_Rep3 929.47057710485 929.46948993586 69.502 2 0.02530773597770281 0.006848520023215322 0.0463485764324913 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 35077 11650 GQVIKGIGV True PC9_epitope_Rep2 869.5334521449298 869.53234993586 50.141 2 0.02530266539079267 0.006848520023215322 0.04635315964232252 ['ENSG00000171497|ENST00000307720|PPID'] 72575 22316 MLPLLAALL True PC9_epitope_Rep6 953.5983609006099 953.59781496793 98.809 1 0.02528966875452573 0.006848520023215322 0.04636490880206461 ['ENSG00000249992|ENST00000503771|TMEM158'] 127723 13303 VPAPSPLSA True PC9_epitope_Rep1 837.45961849833 837.45852993586 56.033 2 0.02528378257113912 0.006848520023215322 0.04637023082652121 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 2730 11506 AETAVSVIP True H1975_Epitope_Rep3 885.48074786573 885.4801949679301 49.382 1 0.02527313774518 0.006848520023215322 0.04637985670776848 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 5968 13086 APHPPLSVV True PC9_epitope_Rep1 915.51780208079 915.51670993586 55.204 2 0.02526989348728879 0.006848520023215322 0.046382790752643135 ['ENSG00000183856|ENST00000361170|IQGAP3'] 89967 10535 RDFVLPTAA True NCI_RA007_Epitope_Rep4 988.5341804209198 988.53308993586 47.368 2 0.025267086630402506 0.006848520023215322 0.046385329346323355 ['SLC25A24|p.I172Mfs*3|1|0.53|ENSG00000085491|chr1:108157615-108157615|A/-|frameshift_variant', 'ENSG00000085491|ENST00000565488|SLC25A24'] 68149 21964 LTDQTLIYL True PC9_epitope_Rep1 1078.5910265906998 1078.59047496793 89.303 1 0.025265051710940675 0.006848520023215322 0.04638716985295698 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 121851 15589 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 65.239 2 0.025263203619148907 0.006848520023215322 0.046388841434331335 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 120431 5106 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.42324993586 24.751 2 0.025248693579619664 0.006848520023215322 0.04640196738641245 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 2700 6367 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43324496793 29.419 1 0.025247902461594956 0.006848520023215322 0.04640268313082334 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 19238 10883 ELISNSSDAL True H1975_Epitope_Rep3 1047.50841916555 1047.50732993586 46.944 2 0.025217105827556784 0.006848520023215322 0.04643055283608456 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P'] 25217 12395 FDEILEASD True H1975_Epitope_Rep1 1037.4553209635299 1037.4542299358602 52.711 2 0.0252129256120119 0.006848520023215322 0.04643433684614026 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM'] 90844 8424 REVDPLRIPP True H1975_Epitope_Rep1 1190.6771562565 1190.6760499358602 37.331 2 0.025194359813027572 0.006848520023215322 0.04645114609079253 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 49210 8004 KENAFSLGA True H1975_Epitope_Rep2 935.4712458111899 935.47014993586 35.735 2 0.025191946961898134 0.006848520023215322 0.046453331031887646 ['nc|ENSG00000109111|Q7KZ85-2|SUPT6H', 'ENSG00000109111|ENST00000314616|SUPT6H'] 108775 11769 SYSSTFHSL True PC9_epitope_Rep2 1027.46107505031 1027.45996993586 50.601 2 0.025174518701824015 0.006848520023215322 0.04646911564127417 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 130066 11684 VSDEWENLKY True H1975_Epitope_Rep2 1281.5877321154098 1281.5866299358602 50.015 2 0.025174220355292112 0.006848520023215322 0.04646938589013525 ['ENST00000604992.1_1_3:37285375-37285651:-|nuORF'] 76159 13791 NNALGDLVLY True H1975_Epitope_Rep3 1090.56587447202 1090.56476993586 58.35 2 0.02517381558789964 0.006848520023215322 0.04646975253946828 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.G1527Wfs*20|1|0.85|ENSG00000105429|chr19:42356406-42356407|-/T|frameshift_variant'] 106061 6915 STAGLIIGK True NCI_RA007_Epitope_Rep3 858.51746772762 858.51636993586 34.303 2 0.02515025303391347 0.006848520023215322 0.046491100334095675 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA2|p.Q205Rfs*191|1|0.14|ENSG00000104967|chr19:45940729-45940729|G/-|frameshift_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 90194 3891 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 20.01 2 0.025147167489695175 0.006848520023215322 0.04649389646325308 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 25968 21112 FGANAILGV True PC9_epitope_Rep1 860.4756029156399 860.4745099358599 86.036 2 0.025138230282923984 0.006848520023215322 0.046501996183676064 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 28051 15944 FQSDTNAML True PC9_epitope_Rep3 1025.4487961144498 1025.4476899358601 66.475 2 0.025129587623061438 0.006848520023215322 0.046509830086474635 ['ENSG00000127337|ENST00000247843|YEATS4'] 97680 15098 SEHWLVLVP True NCI_RA007_Epitope_Rep3 1078.5811306133398 1078.58002993586 66.874 2 0.02512613406496666 0.006848520023215322 0.04651296077995781 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 69429 21852 LTYGTMVFV True PC9_epitope_Rep2 1029.5205045027299 1029.51940993586 89.528 2 0.025116887798188905 0.006848520023215322 0.04652134350796104 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000589744.1_1_17:73949530-73951667:-|nuORF'] 121803 16067 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.058 2 0.025100515986020536 0.006848520023215322 0.046536189417957674 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 43867 6288 IHSSSTVL True PC9_epitope_Rep1 842.44978209062 842.44868993586 29.0 2 0.02509432990377342 0.006848520023215322 0.04654179997501636 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 130888 10891 VTDDALVY True H1975_Epitope_Rep3 894.4334633201399 894.4329149679301 46.977 1 0.025092539794962045 0.006848520023215322 0.04654342364622124 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 40574 8883 HRGTGLVL True PC9_epitope_Rep1 851.49773534255 851.49662993586 39.007 2 0.025090867727000653 0.006848520023215322 0.046544940294567336 ['ENSG00000099812|ENST00000215582|MISP'] 77265 10649 NSATGVPTV True PC9_epitope_Rep2 844.42904664604 844.4284949679301 46.274 1 0.025070877578511494 0.006848520023215322 0.04656307556443398 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 36085 21208 GVAETLVLV True PC9_epitope_Rep2 899.5327834385898 899.5322349679301 87.034 1 0.025051342491596518 0.006848520023215322 0.04658080373365254 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 52816 10106 KPAEFTVDA True PC9_epitope_Rep1 976.4865615221598 976.48546993586 43.745 2 0.025036244181295172 0.006848520023215322 0.04659450939564733 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 90530 8756 RELVKNWVP True H1975_Epitope_Rep3 1139.64512785223 1139.64349490379 38.684 3 0.02503158210115464 0.006848520023215322 0.046598742136223684 ['ENSG00000127540|ENST00000591899|UQCR11'] 25665 7438 FEQEMATAA True NCI_RA007_Epitope_Rep3 996.4222470134398 996.42114993586 36.38 2 0.025029596331085213 0.006848520023215322 0.04660054513116798 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 26364 11191 FHTDPEAL True PC9_epitope_Rep3 928.42904664604 928.4279499358599 48.051 2 0.025015717685673868 0.006848520023215322 0.04661314798855177 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 105200 10674 SRGQGLLL True PC9_epitope_Rep4 842.4974009893799 842.49630993586 48.804 2 0.024968390420055706 0.0068714163010423195 0.04665614625052658 ['ENSG00000173918|ENST00000579760|C1QTNF1', 'nc|ENSG00000173918|Q9BXJ1-2|C1QTNF1'] 105998 14018 SSVATVVYL True H1975_Epitope_Rep2 937.5120479940099 937.51149496793 59.07 1 0.024963189012444903 0.0068714163010423195 0.04666087391923839 ['ENSG00000132383|ENST00000254719|RPA1'] 139937 20854 YQAPDIDVQL True PC9_epitope_Rep3 1160.57135377528 1160.57077496793 85.488 1 0.02490964888429244 0.006889832277820308 0.04670956105985981 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 83777 6826 PVKAAQFEPPG True NCI_RA007_Epitope_Rep3 1139.5975089534697 1139.59640993586 33.958 2 0.024895340291307865 0.006889832277820308 0.0467225799152184 ['nc|ENSG00000244682|P31995|FCGR2C', 'ENST00000537821.2_1_1:161482968-161571037:+|nuORF', 'ENST00000507374.5_1_1:161564627-161571037:+|nuORF', 'nc|ENSG00000143226|P12318-2|FCGR2A', 'ENSG00000143226|ENST00000271450|FCGR2A'] 48988 7720 KEFIKIVEA True NCI_RA007_Epitope_Rep3 1075.62774645259 1075.62664993586 37.49 2 0.024893072258641815 0.006889832277820308 0.04672464379336876 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 26953 21744 FLDSTSPLL True PC9_epitope_Rep1 991.52261267771 991.52150993586 88.471 2 0.024879009624729727 0.006889832277820308 0.04673744230359539 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 9633 9928 AYAPPPHVI True PC9_epitope_Rep6 963.5178020807899 963.51670993586 48.706 2 0.02487558042451984 0.006889832277820308 0.04674056369126668 ['ENSG00000128335|ENST00000358502|APOL2'] 53032 7709 KPLEPVSTV True PC9_epitope_Rep6 968.55424715916 968.55314993586 38.995 2 0.024874970563876348 0.006889832277820308 0.0467411188278148 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 115144 9601 TRDEVTGEAAL True PC9_epitope_Rep5 1160.567331024 1160.56622993586 41.892 2 0.024834399191630597 0.006889832277820308 0.04677806208228358 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-4|ASPSCR1'] 6885 18215 AQIEDLQVKL True PC9_epitope_Rep2 1155.6499384491499 1155.6488499358602 75.381 2 0.024816637331108258 0.006889832277820308 0.04679424329314226 ['ENSG00000157933|ENST00000378536|SKI'] 38512 5216 HERPEFIA True NCI_RA007_Epitope_Rep5 997.4981292653698 997.49702993586 26.759 2 0.024812684446251655 0.006889832277820308 0.04679784504520193 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 85179 20392 QENVLYIL True PC9_epitope_Rep4 990.5385970950199 990.53750993586 86.584 2 0.024811515232766177 0.006889832277820308 0.04679891044263934 ['ENSG00000122733|ENST00000242315|PHF24'] 137635 5606 YEHEVRLSP True H1975_Epitope_Rep2 1128.55637241748 1128.55471490379 26.565 3 0.024806203744244405 0.006889832277820308 0.04680375057328988 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF', 'ENST00000564808.6_1_16:19125342-19138551:+|nuORF'] 17565 9899 EHGPNPIL True PC9_epitope_Rep1 875.45011644379 875.44900993586 42.934 2 0.024804873947711057 0.006889832277820308 0.046804962425359226 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 60682 17270 LHNDGIYIM True PC9_epitope_Rep5 1074.51681610462 1074.51570993586 71.439 2 0.02478508520792946 0.006889832277820308 0.046822999143283195 ['ENSG00000087448|ENST00000381271|KLHL42'] 73457 15680 MVAPAVASV True PC9_epitope_Rep3 843.4524249429099 843.45132993586 65.456 2 0.024771751847701893 0.006889832277820308 0.04683515530720435 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 36009 21034 GTYDIFYTA True PC9_epitope_Rep2 1049.47057710485 1049.46948993586 86.36 2 0.024757087396044222 0.006889832277820308 0.04684852810033165 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 64677 19471 LPVLIPVAS True PC9_epitope_Rep6 907.5742543277499 907.57314993586 87.559 2 0.024741340847172694 0.006889832277820308 0.046862891247179655 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 1239 6539 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 30.063 1 0.024736634065719413 0.006889832277820308 0.04686718523514977 ['ENSG00000162783|ENST00000367577|IER5'] 31541 9100 GEDPTSVAIA True H1975_Epitope_Rep1 958.46074069714 958.4601949679301 39.907 1 0.02473463724194393 0.006889832277820308 0.04686900703354222 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 82964 22411 PSESLILFL True PC9_epitope_Rep4 1017.5746482505699 1017.57354993586 94.435 2 0.02472814293577216 0.006889832277820308 0.04687493251252983 ['ENST00000293778.10_2_17:4636851-4637124:-|nuORF'] 68405 15438 LTETEDWLY True H1975_Epitope_Rep3 1168.5288202569598 1168.52827496793 64.796 1 0.02472626904810218 0.006889832277820308 0.0468766423858931 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 9730 19771 AYGNVFSAF True PC9_epitope_Rep6 974.4497820906199 974.44868993586 88.707 2 0.024724438583224706 0.006889832277820308 0.04687831268764342 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 31519 19395 GEDFLSWNDL True H1975_Epitope_Rep2 1194.51931820242 1194.51822993586 80.497 2 0.02471828792101609 0.006889832277820308 0.046883925541423545 ['ENSG00000183856|ENST00000361170|IQGAP3'] 138710 17499 YIPGRQIIEV True PC9_epitope_Rep5 1186.6710082468999 1186.66990993586 72.313 2 0.024717008432687627 0.006889832277820308 0.046885093223304364 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 75765 12104 NLLQEQSRMRP True NCI_RA007_Epitope_Rep1 1370.70886739094 1370.7077699358601 51.07 2 0.0246858370021576 0.006889832277820308 0.04691354832031991 ['ENSG00000105717|ENST00000251203|PBX4', 'ENST00000558222.1_1_19:19675736-19681567:-|nuORF'] 43870 6263 IHSSSTVL True PC9_epitope_Rep3 842.44978209062 842.44868993586 29.127 2 0.024685658729504862 0.006889832277820308 0.04691371109965302 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 115192 18077 TRDQFLDTL True PC9_epitope_Rep1 1107.5560380643099 1107.55547496793 74.326 1 0.024667478308672827 0.006889832277820308 0.04693031398572143 ['ENSG00000010292|ENST00000315579|NCAPD2'] 71869 4203 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 21.274 2 0.024660902039899762 0.006889832277820308 0.04693632083885546 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 36518 5350 GVGPVPARA True PC9_epitope_Rep2 822.47118624154 822.47008993586 25.966 2 0.024658853159718393 0.006889832277820308 0.0469381924456348 ['ENSG00000129636|ENST00000320640|ITFG1'] 70193 22114 LVQDILLNV True PC9_epitope_Rep2 1025.6120963884498 1025.61098993586 90.538 2 0.02465008455879006 0.006889832277820308 0.04694620307643983 ['ENST00000464178.1_1_1:38148797-38151999:-|nuORF', 'ENSG00000116922|ENST00000486637|C1orf109'] 111156 11920 THGGLVTGL True PC9_epitope_Rep1 853.46576650793 853.46466993586 50.716 2 0.024645036413950026 0.006889832277820308 0.0469508153729158 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 104527 17064 SQPDLLHQL True PC9_epitope_Rep5 1049.55055876105 1049.54946993586 70.655 2 0.024636908124908225 0.006909824471908549 0.04695824267815424 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000465402.1_1_X:53230656-53239709:-|nuORF', 'ENST00000492117.1_1_Y:21877982-21883284:-|nuORF', 'ENST00000544777.1_1_12:442481-443474:-|nuORF', 'ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'KDM5C|p.Y601Lfs*21|1|0.69|ENSG00000126012|chrX:53201918-53201919|-/A|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C', 'ENSG00000073614|ENST00000399788|KDM5A', 'nc|ENSG00000073614|P29375-2|KDM5A'] 67820 18083 LTAERVEEL True PC9_epitope_Rep1 1058.5607890915799 1058.5596899358602 74.349 2 0.02463585605522932 0.006909824471908549 0.0469592040893849 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'ENST00000515254.1_1_5:137506426-137514303:-|nuORF'] 114081 4763 TPFQGQGHGA True PC9_epitope_Rep1 998.4569927293797 998.45588993586 23.187 2 0.02463307846524144 0.006909824471908549 0.04696174240957609 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 88270 10758 QSEIASM[Oxidation]LY True H1975_Epitope_Rep1 1056.47976227 1056.47917496793 46.342 1 0.024631341220426765 0.006909824471908549 0.046963330061519516 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 29387 15272 FVDPLVTNY True H1975_Epitope_Rep3 1066.53351171458 1066.53297496793 64.153 1 0.024611021743498395 0.006909824471908549 0.046981903187605666 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 31543 9299 GEDPTSVAIA True H1975_Epitope_Rep2 958.46074069714 958.4601949679301 40.727 1 0.024603982057635247 0.006909824471908549 0.04698833928728329 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 30275 20219 GAAAFFTAV True PC9_epitope_Rep4 853.4334037504899 853.4328549679301 85.912 1 0.024603093337172366 0.006909824471908549 0.046989151860997995 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 61730 12455 LLAELEQLK True NCI_RA007_Epitope_Rep2 1055.6226610721499 1055.6215699358602 53.056 2 0.024578763567238305 0.006909824471908549 0.047011401603749316 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 75202 16155 NIDLVSKLLY True H1975_Epitope_Rep2 1176.675424921 1176.6743299358602 67.351 2 0.024572131059668836 0.006909824471908549 0.047017468610767 ['ENSG00000188419|ENST00000357749|CHM', 'CHM|p.Y368Mfs*41|1|0.18|ENSG00000188419|chrX:85956218-85956218|C/-|frameshift_variant', 'ENSG00000203668|ENST00000366553|CHML'] 105529 12393 SSAPGLTSV True PC9_epitope_Rep5 817.4181476091701 817.4175949679301 52.666 1 0.02457108086169948 0.006909824471908549 0.047018429327043226 ['ENSG00000115216|ENST00000379852|NRBP1'] 108929 11038 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53907496793 47.547 1 0.024562257715643198 0.006909824471908549 0.04702650135092524 ['ENSG00000183751|ENST00000568546|TBL3'] 131562 20213 VTLEQTVTL True PC9_epitope_Rep6 1002.5597264624199 1002.55862993586 90.425 2 0.024547535073710047 0.006909824471908549 0.047039973229858284 ['ENSG00000083535|ENST00000326291|PIBF1'] 119633 9818 VATVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 42.732 2 0.024545992926131542 0.006909824471908549 0.047041384551494446 ['CON__P00761'] 111765 20397 TIITTLENL True PC9_epitope_Rep6 1016.57537652656 1016.57426993586 91.156 2 0.02453151200724501 0.006909824471908549 0.04705463873464486 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 93473 11653 RQIIAVVL True NCI_RA007_Epitope_Rep3 910.5963867546599 910.59528993586 52.957 2 0.024527362777097463 0.006909824471908549 0.04705843704448805 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 55259 22830 LADLSELQL True PC9_epitope_Rep2 1000.5440763982799 1000.54296993586 93.305 2 0.024518583926546746 0.006909824471908549 0.04706647427325619 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant'] 43572 4795 IGSGC[Carbamidomethyl]NLDSAR True NCI_RA007_Epitope_Rep1 1148.5244209456298 1148.5233299358601 22.731 2 0.024515082919276048 0.006909824471908549 0.04706967984276194 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 75055 14699 NHTIYINNL True PC9_epitope_Rep3 1100.5614577979202 1100.56036993586 61.68 2 0.024512263816871306 0.006909824471908549 0.04707226118406703 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 129734 6542 VRQAPGKGLEW True NCI_RA007_Epitope_Rep3 1239.6724052292298 1239.67075490379 32.778 3 0.024476073899789952 0.006909824471908549 0.04710540941664352 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000211950|A0A0C4DH33|IGHV1-24', 'nc|ENSG00000211955|P0DP02|IGHV3-30-3', 'nc|ENSG00000270550|P0DP03|IGHV3-30-5', 'nc|ENSG00000211967|P01767|IGHV3-53', 'nc|ENSG00000211955|P01772|IGHV3-33', 'nc|ENSG00000211938|P01780|IGHV3-7'] 98325 15072 SEWDGIVTV True NCI_RA007_Epitope_Rep3 1004.4814761417199 1004.48036993586 66.768 2 0.024474208105230877 0.006909824471908549 0.047107118925756926 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 62373 17779 LLGPPPVGV True PC9_epitope_Rep6 847.51673945163 847.51564993586 81.022 2 0.024464657347077368 0.00692979813196746 0.04711587049405282 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 78495 10651 NYNNQSSNFGP True PC9_epitope_Rep2 1240.51087877704 1240.50978993586 46.281 2 0.02446095615295374 0.00692979813196746 0.04711926234564491 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 1379 12246 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43397496793 52.186 1 0.024459289353004045 0.00692979813196746 0.04712078990280361 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 127737 11546 VPAPSPLSA True PC9_epitope_Rep6 837.45961849833 837.45852993586 55.511 2 0.024442188239118014 0.00692979813196746 0.04713646480588882 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 86478 5316 QKSLSLSPG True NCI_RA007_Epitope_Rep3 915.5025459394699 915.50144993586 27.92 2 0.0244391981395685 0.00692979813196746 0.04713920598407771 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 39535 9248 HLGALLAR True PC9_epitope_Rep1 849.51847078713 849.51736993586 40.425 2 0.024439064225770826 0.00692979813196746 0.04713932875287749 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 2821 7561 AEVDAAMAA True H1975_Epitope_Rep3 847.3745685450299 847.3740149679301 34.065 1 0.02443435426397283 0.00692979813196746 0.04714364689788968 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 55301 7772 LAEAALELREE True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 34.851 2 0.02441533883099006 0.00692979813196746 0.04716108382999563 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 90109 6887 REAQSFISA True NCI_RA007_Epitope_Rep5 1007.5036085686298 1007.50250993586 33.171 2 0.024414362586275943 0.00692979813196746 0.04716197918103821 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 101115 19410 SLGLPLLW True H1975_Epitope_Rep1 897.53238951577 897.53184496793 80.841 1 0.024406784696395227 0.00692979813196746 0.047168929635905986 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'nc|ENSG00000133816|O94851-2|MICAL2', 'ENST00000530691.5_1_11:12229562-12281716:+|nuORF'] 24373 18889 FAADIISVL True NCI_RA007_Epitope_Rep5 947.53278343859 947.53168993586 79.501 2 0.02440516374702038 0.00692979813196746 0.04717041648523064 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 1084 9620 AEAIRILAA True H1975_Epitope_Rep1 926.5549158654999 926.55436496793 41.929 1 0.024402380390058005 0.00692979813196746 0.04717296966862251 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 6417 7823 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 35.035 2 0.02440041210103154 0.00692979813196746 0.047174775257198334 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 127731 12353 VPAPSPLSA True PC9_epitope_Rep4 837.45961849833 837.45852993586 55.323 2 0.024373065670816613 0.00692979813196746 0.047199867204048174 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 130885 10949 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.4329149679301 47.146 1 0.024357865104418303 0.00692979813196746 0.04721381944942349 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 25495 13497 FEFNDGAIA True H1975_Epitope_Rep2 982.4396113297397 982.43850993586 57.049 2 0.024349051248120777 0.00692979813196746 0.04722191106614748 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 84269 17055 PYNPLWAQL True NCI_RA007_Epitope_Rep3 1100.5654805492 1100.5643899358602 74.951 2 0.02434622660587527 0.00692979813196746 0.04722450449287439 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 35387 10761 GSDDGVLAY True H1975_Epitope_Rep3 895.3923267841499 895.39177496793 46.473 1 0.024338176702493507 0.00692979813196746 0.047231896113846525 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 134652 17745 VYSQIPAAVKL True PC9_epitope_Rep1 1187.6914093383098 1187.6903099358601 73.054 2 0.024322027280849402 0.00692979813196746 0.047246727838039335 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 100984 20718 SLFRVITEV True PC9_epitope_Rep3 1062.60734536118 1062.6062499358602 84.965 2 0.024314735512040473 0.00692979813196746 0.04725342592085857 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 5904 7673 APGLPTARA True PC9_epitope_Rep1 852.4817509252399 852.48064993586 34.336 2 0.024293929994943664 0.006970819823992589 0.04727254185664903 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 137010 20598 YALDLSTFL True H1975_Epitope_Rep1 1041.53826274185 1041.5371699358602 85.647 2 0.024276649689637712 0.006970819823992589 0.047288423784412725 ['ENSG00000137331|ENST00000259874|IER3'] 105413 9789 SRSPGLVL True PC9_epitope_Rep6 827.48650195251 827.48540993586 48.102 2 0.02426259737387192 0.006970819823992589 0.047301342238762284 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 117707 18159 TVVAAIQAV True PC9_epitope_Rep3 870.51746772762 870.51636993586 75.049 2 0.024250906373537023 0.006970819823992589 0.04731209216279108 ['nc|ENSG00000170265|Q9UDV7-2|ZNF282', 'ENSG00000170265|ENST00000610704|ZNF282', 'ZNF282|p.E109K|1|0.09|ENSG00000170265|chr7:149198492-149198492|G/A|missense_variant'] 89140 12433 QVRDVIIAA True PC9_epitope_Rep3 983.5763795860698 983.57528993586 52.849 2 0.024250027965814134 0.006970819823992589 0.04731289994508396 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 96643 10128 SAIGLADPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43778993586 45.814 2 0.02424200669051201 0.006970819823992589 0.047320276831316815 ['ENSG00000186838|ENST00000335426|SELENOV'] 54438 15746 KYFLWVVKF True NCI_RA007_Epitope_Rep5 1228.7008518231999 1228.6997499358602 67.283 2 0.024236006955134858 0.006970819823992589 0.04732579520813315 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 25503 11968 FEGGVVIAA True H1975_Epitope_Rep3 861.4596184983299 861.4590749679301 51.193 1 0.024223986119211935 0.006970819823992589 0.047336853235558835 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 97909 4082 SEMRAPPAA True H1975_Epitope_Rep2 928.4436511643598 928.44254993586 20.792 2 0.024221269233259138 0.006970819823992589 0.04733935281258334 ['ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF'] 27004 21694 FLEQELETI True PC9_epitope_Rep1 1120.56520576568 1120.5641099358602 88.276 2 0.024215527325582364 0.006970819823992589 0.04734463582019142 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 33261 11663 GKIDTIEIITD True NCI_RA007_Epitope_Rep4 1216.6550833992399 1216.6539899358602 51.82 2 0.024210248645796663 0.006970819823992589 0.04734949305750128 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 64714 20407 LPWAPAGVAA True PC9_epitope_Rep5 951.5178020807898 951.5172549679301 83.534 1 0.024176767896934424 0.006970819823992589 0.047380310474215925 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 76388 12775 NQCTVQVRL True PC9_epitope_Rep5 1059.54951321523 1059.54840993586 54.148 2 0.024169587234943717 0.006970819823992589 0.04738692211600552 ['ENSG00000130382|ENST00000252674|MLLT1'] 96693 21293 SALEELVNV True PC9_epitope_Rep3 972.5127762699999 972.51166993586 87.198 2 0.024143494435983067 0.006970819823992589 0.04741095374074625 ['ENSG00000162408|ENST00000377705|NOL9'] 40626 13292 HRLLTDII True PC9_epitope_Rep6 979.58146496651 979.58036993586 62.782 2 0.024136050845042833 0.006970819823992589 0.04741781120434837 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 24089 18426 EYPDRIMNTF True PC9_epitope_Rep2 1284.5808729131597 1284.5802749679299 76.207 1 0.024118360188393452 0.006970819823992589 0.04743411218778862 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 26047 14418 FGIDRDAIAQA True PC9_epitope_Rep4 1175.59348620219 1175.5923899358602 63.367 2 0.024108620083921187 0.006970819823992589 0.047443089171057204 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 104965 13631 SRDGMNIVL True PC9_epitope_Rep6 1003.5120650773499 1003.51096993586 64.2 2 0.02409555723931649 0.006970819823992589 0.04745513079741709 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 116353 11744 TTEVVNELY True H1975_Epitope_Rep1 1066.51825557326 1066.51714993586 50.166 2 0.024091531065349895 0.006970819823992589 0.04745884273198203 ['ENSG00000113719|ENST00000393784|ERGIC1'] 30381 11804 GADQTTLLY True H1975_Epitope_Rep2 980.4814761417199 980.48036993586 50.48 2 0.0240811549341634 0.006970819823992589 0.04746841013617153 ['ENSG00000075539|ENST00000358350|FRYL'] 97630 9365 SEFGKIYGP True NCI_RA007_Epitope_Rep4 996.4916469025998 996.49054993586 42.877 2 0.024067286710498598 0.006970819823992589 0.04748119997790154 ['ENSG00000082781|ENST00000296181|ITGB5'] 4176 17679 AHVPTLQVL True PC9_epitope_Rep3 976.5705659296399 976.56946993586 73.198 2 0.02406234299248419 0.006970819823992589 0.04748575997418746 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF', 'ENST00000592624.1_1_19:1242319-1242811:+|nuORF'] 122145 11813 VGAGAPVYLAA True H1975_Epitope_Rep3 987.5389314481899 987.53782993586 50.586 2 0.02405500714128167 0.006970819823992589 0.047492527106923366 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 7214 10770 ARAPATLL True PC9_epitope_Rep5 811.49158733295 811.49048993586 46.418 2 0.02405114825491553 0.006970819823992589 0.04749608715383298 ['nc|ENSG00000135318|P21589-2|NT5E', 'ENSG00000135318|ENST00000257770|NT5E'] 45367 11278 IQDNKFIEA True PC9_epitope_Rep1 1076.55022440788 1076.54912993586 48.26 2 0.024045930303655344 0.006970819823992589 0.04750090137252533 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 1319 7383 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 33.339 2 0.024014745766611383 0.006970819823992589 0.047529681564814116 ['ENSG00000012174|ENST00000379484|MBTPS2'] 17612 7797 EHINSVSAM True PC9_epitope_Rep1 986.44913046762 986.44802993586 34.815 2 0.024002674154171105 0.006970819823992589 0.047540826369286235 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 37855 20355 GYMEGYYTF True PC9_epitope_Rep4 1129.44264810485 1129.44207496793 86.438 1 0.023993446342064496 0.006970819823992589 0.04754934718425567 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 21102 11845 ERADALQL True PC9_epitope_Rep5 914.48214484806 914.48104993586 50.561 2 0.023984994760079707 0.006970819823992589 0.04755715236265564 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 73149 10675 MRSDTPAML True PC9_epitope_Rep2 1020.47323704048 1020.47212993586 46.374 2 0.02398405890659592 0.006970819823992589 0.047558016705092514 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 65 12768 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44794993586 54.215 2 0.02395658041625049 0.006970819823992589 0.04758340135505854 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 90457 3710 REKGFDQAP True NCI_RA007_Epitope_Rep4 1046.5145076054998 1046.5134099358602 20.397 2 0.023942074009183814 0.006970819823992589 0.047596806959594264 ['ENST00000462349.5_1_21:44473992-44479496:-|nuORF', 'ENSG00000160200|ENST00000398165|CBS', 'nc|ENSG00000160200|P35520-2|CBS'] 26512 12901 FIFSDTHEL True NCI_RA007_Epitope_Rep5 1107.52367530687 1107.52256993586 56.306 2 0.023931523790871975 0.006970819823992589 0.047606558572352915 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 1393 10561 AEEEAPWAA True H1975_Epitope_Rep2 972.4188758851598 972.4183249679301 45.645 1 0.023921649869166374 0.006992035562141137 0.04761568659644406 ['ENSG00000100294|ENST00000290429|MCAT', 'nc|ENSG00000100294|Q8IVS2-2|MCAT'] 105435 6878 SRTPGQVL True PC9_epitope_Rep5 856.4766655447999 856.47556993586 31.426 2 0.023917300228518307 0.006992035562141137 0.047619708120618325 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 20806 17189 EQIGALQEV True PC9_epitope_Rep1 985.5080252427299 985.50692993586 70.938 2 0.0238932793669896 0.006992035562141137 0.047641922082535225 ['ENSG00000171017|ENST00000306708|LRRC8E'] 103029 21206 SPFQFTVGP True PC9_epitope_Rep5 978.4810822188999 978.47998993586 86.616 2 0.023880282815103404 0.006992035562141137 0.04765394462251911 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 755 16018 AAVPGKTFVNI True PC9_epitope_Rep5 1115.63389446219 1115.63278993586 66.603 2 0.023877666498018188 0.006992035562141137 0.04765636516973604 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 124814 10404 VHGPPVQL True PC9_epitope_Rep2 845.47593726881 845.47484993586 45.342 2 0.023870880107577534 0.006992035562141137 0.047662644237991506 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 133712 20304 VYDGKFAIF True PC9_epitope_Rep3 1058.54368247546 1058.5425899358602 83.348 2 0.023865063365025925 0.006992035562141137 0.047668026696322884 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'nc|ENSG00000065361|P21860-2|ERBB3'] 103691 5861 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 27.941 2 0.023859116403014226 0.006992035562141137 0.04767353017777159 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 33163 10166 GIVEFSGK True PC9_epitope_Rep5 835.44396843419 835.44286993586 44.09 2 0.023848572349351577 0.006992035562141137 0.04768328924111173 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 77235 11285 NRWKQSVEL True PC9_epitope_Rep5 1158.61455599994 1158.6134499358602 48.4 2 0.023834380492728045 0.006992035562141137 0.04769642717330541 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 88260 7105 QSDVIHQSVY True H1975_Epitope_Rep2 1174.56185172074 1174.56074993586 32.259 2 0.023819699025698398 0.006992035562141137 0.04771002154423239 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 587 11310 AARLPLDAA True PC9_epitope_Rep3 896.5079656730799 896.50686993586 48.511 2 0.02379195861390336 0.006992035562141137 0.04773571675633729 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 8668 19392 AVAGATSLVTL True PC9_epitope_Rep4 1001.57571087973 1001.5746099358599 82.701 2 0.023759032573270587 0.007037851603194814 0.047766230309012905 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF'] 125204 10192 VIIGSTHVL True NCI_RA007_Epitope_Rep4 937.55966689277 937.55856993586 46.059 2 0.023745760700285633 0.007037851603194814 0.04777853436743459 ['ENSG00000116266|ENST00000370008|STXBP3'] 88894 8930 QVEEELTHLQK True PC9_epitope_Rep2 1352.6935941662798 1352.69194490379 39.706 3 0.023741959220139015 0.007037851603194814 0.04778205912371243 ['nc|ENSG00000167460|P67936-2|TPM4'] 2831 7452 AEVDAAMAA True NCI_RA007_Epitope_Rep5 847.3745685450299 847.3740149679301 35.344 1 0.02373651532021074 0.007060348619180999 0.047787107120804494 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 11604 21346 DGFLSELTQQL True NCI_RA007_Epitope_Rep2 1249.6190322436898 1249.6184749679298 88.325 1 0.023719937783334106 0.007060348619180999 0.04780248181916516 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 47873 14606 IYIAGHPAF True PC9_epitope_Rep4 987.51780208079 987.51670993586 64.112 2 0.02371548326401223 0.007060348619180999 0.04780661383133792 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 103129 6300 SPHPPSEVTA True PC9_epitope_Rep3 1020.48762415132 1020.48652993586 29.264 2 0.023710462025133803 0.007060348619180999 0.04781127189083461 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 35344 14991 GRTEVSFTL True PC9_epitope_Rep4 1008.52400966004 1008.52290993586 65.601 2 0.023680947147510987 0.007083333333333333 0.0478386596735658 ['ENSG00000188342|ENST00000340473|GTF2F2', 'GTF2F2-CTIF|2|fusion', 'GTF2F2-CTIF|1|fusion'] 118364 22288 TYNMVLNLL True PC9_epitope_Rep4 1079.56851732431 1079.56740993586 93.969 2 0.023675500084215123 0.0071059880100918914 0.04784371560912291 ['ENSG00000039123|ENST00000230640|MTREX'] 71713 9388 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42662993586 41.022 2 0.02367290774031639 0.0071059880100918914 0.04784612196610401 ['ENSG00000026025|ENST00000544301|VIM'] 136949 10703 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.3808149679301 46.484 1 0.023666455762277695 0.0071059880100918914 0.04785211148852441 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 13979 6065 DRDPASGTAL True PC9_epitope_Rep6 1001.47778774361 1001.47668993586 31.705 2 0.023624072109207535 0.007124352331606218 0.04789147282118657 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 31993 5443 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 25.963 1 0.023593787893645433 0.007124352331606218 0.04791961409509077 ['ENSG00000108344|ENST00000264639|PSMD3'] 75095 14135 NHVSSPFEL True PC9_epitope_Rep6 1028.4927095317598 1028.4916099358602 66.241 2 0.023591386653139212 0.007124352331606218 0.047921846013007675 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 133678 21123 VYAPPVGGFSF True PC9_epitope_Rep4 1139.56514619603 1139.56457496793 89.412 1 0.023586803677566666 0.007124352331606218 0.04792610606305105 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 98118 10978 SESGIQMVP True NCI_RA007_Epitope_Rep4 946.44298245802 946.44243496793 49.096 1 0.02358662387319517 0.007124352331606218 0.04792627320450677 ['ENSG00000171311|ENST00000370902|EXOSC1'] 98899 20351 SGYPGLLNGV True PC9_epitope_Rep2 975.5025459394699 975.50199496793 83.703 1 0.02358438048116031 0.007124352331606218 0.04792835864423471 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 120425 8372 VEEPQALAA True H1975_Epitope_Rep2 926.4709114580198 926.46980993586 37.156 2 0.023570450407575883 0.007124352331606218 0.04794130963055971 ['ENSG00000105447|ENST00000253237|GRWD1'] 24610 16690 FAIPLIEKL True H1975_Epitope_Rep3 1042.64266824074 1042.6415699358602 69.72 2 0.0235691097079326 0.007124352331606218 0.04794255625233911 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 73640 18631 MWSPTHPALF True PC9_epitope_Rep6 1185.5641006502099 1185.56300993586 84.306 2 0.023561063688581324 0.007124352331606218 0.04795003824619423 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 115138 9729 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 47.83 2 0.023549519107989626 0.007124352331606218 0.04796077525786508 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 17267 14611 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50708496793 61.469 1 0.02354245137332868 0.007124352331606218 0.047967349580954645 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 3091 12782 AGAAVAFI True H1975_Epitope_Rep2 718.40137534622 718.40082496793 54.27 1 0.023535181954520597 0.007124352331606218 0.04797411229433076 ['ENSG00000147100|ENST00000587091|SLC16A2'] 586 10509 AARLPLDAA True PC9_epitope_Rep2 896.5079656730799 896.50686993586 45.745 2 0.02352439608703593 0.007124352331606218 0.047984147815803846 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 129363 15485 VRDGATLIL True PC9_epitope_Rep1 956.5654805492 956.56438993586 64.385 2 0.02351706816227747 0.007124352331606218 0.047990966956342904 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 40588 5901 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 30.965 2 0.02348800648420401 0.007124352331606218 0.048018018835572704 ['ENSG00000099812|ENST00000215582|MISP'] 62624 19720 LLLDVPTAAV True PC9_epitope_Rep6 1010.6011973515799 1010.6006749679301 88.512 1 0.02348742862941011 0.007124352331606218 0.0480185568572894 ['ENSG00000216490|ENST00000407280|IFI30'] 132229 16755 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.49037496793 69.453 1 0.023484675105766663 0.007124352331606218 0.0480211206424034 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 62142 10068 LLEGSGLALR True H1975_Epitope_Rep1 1027.6025943339098 1027.6014899358602 43.667 2 0.02348359718817278 0.007124352331606218 0.04802212431451895 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 8894 10773 AVFPSIVGR True H1975_Epitope_Rep1 944.5443511817999 944.54324993586 46.4 2 0.02347251515774514 0.007124352331606218 0.048032444046959104 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 86193 19842 QIGAKFWEV True PC9_epitope_Rep5 1076.5654805492 1076.5643899358602 81.37 2 0.02347182107712557 0.007124352331606218 0.04803309044564542 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 39044 9106 HHSGNTYFL True PC9_epitope_Rep2 1074.48829285766 1074.4871899358602 40.368 2 0.02345794982424984 0.007124352331606218 0.04804601029649442 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 3953 6844 AHDPAGPSL True PC9_epitope_Rep1 863.41373093507 863.41262993586 31.131 2 0.023451538316614232 0.007124352331606218 0.04805198303300814 ['ENSG00000183779|ENST00000331569|ZNF703'] 117089 22623 TVISILNTI True PC9_epitope_Rep5 972.58554728744 972.58444993586 92.018 2 0.023434324997010387 0.007124352331606218 0.04806802143016704 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 56171 16588 LAVVAGVAAE True PC9_epitope_Rep5 898.5123823471799 898.5118349679301 68.812 1 0.023414871688244476 0.007124352331606218 0.04808615230802634 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 104865 7421 SRAPVSAL True PC9_epitope_Rep5 799.45520182423 799.45410993586 33.5 2 0.02339335999948254 0.007124352331606218 0.048106208292546596 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 57496 6000 LEDKPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 28.058 2 0.023389608288373574 0.007124352331606218 0.04810970683979045 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 30243 19729 FYVGHIDAF True PC9_epitope_Rep2 1067.50763131991 1067.50652993586 81.277 2 0.023384838073024647 0.007124352331606218 0.04811415547010675 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 48275 12235 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 51.921 3 0.023377488597308538 0.007124352331606218 0.048121010152289194 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 30156 14692 FYPPKVELF True NCI_RA007_Epitope_Rep4 1138.60628273202 1138.6051899358602 63.929 2 0.02337113742786569 0.007124352331606218 0.0481269343951706 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 39533 5861 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 29.23 2 0.023324383323924985 0.0071431873873040825 0.04817056444173547 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 108627 10652 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59198993586 45.864 2 0.023309030425997638 0.0071431873873040825 0.04818489868238125 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 34675 19195 GQDGLYIGV True PC9_epitope_Rep4 920.4603467743199 920.45924993586 81.933 2 0.023305650501188026 0.0071431873873040825 0.04818805482944443 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 17824 13197 EHTGAIDVL True PC9_epitope_Rep1 953.4818104948899 953.48070993586 55.626 2 0.023298351402410676 0.0071431873873040825 0.048194871259439 ['TMED8|p.K202Sfs*25|1|0.07|ENSG00000100580|chr14:77343335-77343335|C/-|frameshift_variant', 'ENSG00000100580|ENST00000216468|TMED8'] 104067 16520 SQDPTMIGV True PC9_epitope_Rep5 946.44298245802 946.44243496793 68.544 1 0.02327696206879282 0.0071431873873040825 0.04821485081624282 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 75907 10983 NLQTVNVDEN True PC9_epitope_Rep5 1144.53603089572 1144.5349299358602 47.236 2 0.023262439460811624 0.0071431873873040825 0.04822842017884895 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 39536 7409 HLGALLAR True PC9_epitope_Rep2 849.51847078713 849.51736993586 33.876 2 0.02325557917296292 0.0071431873873040825 0.048234831275592915 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 77995 20988 NVPEGLLATV True PC9_epitope_Rep3 1011.56006081559 1011.55896993586 86.007 2 0.02324351469612482 0.0071431873873040825 0.04824610753350356 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 114301 11086 TPQEDYVEA True PC9_epitope_Rep5 1050.4505699362599 1050.4494699358602 47.63 2 0.023223453530087992 0.0071431873873040825 0.04826486290113313 ['ENSG00000140829|ENST00000268482|DHX38'] 103827 11314 SPYHNFDSV True PC9_epitope_Rep1 1064.45632402304 1064.4552299358602 48.399 2 0.023220021568193406 0.0071431873873040825 0.04826807208367763 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 61141 8400 LIIYSRNQ True NCI_RA007_Epitope_Rep4 1005.5607295219299 1005.55962993586 39.126 2 0.023210665337330613 0.0071431873873040825 0.048276821877702006 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 1380 12094 AEEDPPWAP True H1975_Epitope_Rep3 1010.4345259492999 1010.43397496793 51.684 1 0.02320533712468797 0.0071431873873040825 0.04828180532701555 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 109145 15667 TAMDVVYAL True NCI_RA007_Epitope_Rep3 981.4841189940099 981.48357496793 69.246 1 0.023201351120281814 0.0071431873873040825 0.04828553369695054 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 8998 13437 AVGPIVQL True H1975_Epitope_Rep1 795.48543932335 795.48489496793 56.799 1 0.023194485282047185 0.0071431873873040825 0.04829195632715096 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.D74Y|1|0.21|ENSG00000112531|chr6:163455356-163455356|G/T|missense_variant'] 9586 20995 AYAENIALL True PC9_epitope_Rep1 976.5229470308799 976.52239496793 85.583 1 0.023192939430656027 0.0071431873873040825 0.04829340248814781 ['ENSG00000196455|ENST00000356763|PIK3R4'] 117183 11273 TVLERVEGA True PC9_epitope_Rep3 972.5240096600398 972.52290993586 48.37 2 0.023182113476613954 0.0071431873873040825 0.04830353130101642 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 6565 11714 APVAEVPTA True PC9_epitope_Rep3 853.4545331178899 853.45342993586 50.076 2 0.02317206842994478 0.0071431873873040825 0.04831293108011883 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 48866 8300 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54861496793 36.91 1 0.023168839090579575 0.0071431873873040825 0.04831595329963648 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 89143 10837 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.57528993586 49.444 2 0.02315317940706201 0.0071431873873040825 0.04833061085864662 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 20812 15709 EQIHTILQV True PC9_epitope_Rep4 1079.59750895347 1079.59640993586 68.351 2 0.02314109895972947 0.0071431873873040825 0.04834192076790888 ['ENSG00000163481|ENST00000295704|RNF25', 'ENST00000463188.5_1_2:219529923-219536693:-|nuORF'] 60413 8304 LGVAEAVAA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 36.893 1 0.023138946194507196 0.0071431873873040825 0.04834393645336372 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 36001 7498 GTWNGTTKV True PC9_epitope_Rep3 962.48214484806 962.48104993586 33.844 2 0.02313859751224032 0.0071431873873040825 0.04834426293949603 ['ENSG00000176105|ENST00000314574|YES1'] 67854 19455 LTAPALALA True PC9_epitope_Rep4 839.5116540711899 839.51110496793 82.949 1 0.02313813380141756 0.0071431873873040825 0.0483446971346417 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 1225 6012 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54616993586 28.104 2 0.023124544480611155 0.0071431873873040825 0.048357422927118705 ['ENSG00000154124|ENST00000284274|OTULIN'] 35195 10529 GRADGYVL True PC9_epitope_Rep5 849.43446637965 849.43336993586 45.487 2 0.0231160797982844 0.0071431873873040825 0.04836535113807048 ['ENSG00000142937|ENST00000396651|RPS8'] 104485 8062 SQLSMKAAL True NCI_RA007_Epitope_Rep3 947.51100244819 947.50990993586 38.798 2 0.02310970759099226 0.0071431873873040825 0.048371320206100486 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 98329 15644 SEWDGIVTV True NCI_RA007_Epitope_Rep5 1004.4814761417199 1004.48036993586 66.882 2 0.023070320537224086 0.007162661737523105 0.048408229080677816 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 1610 6149 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.38646993586 28.624 2 0.023065052833858145 0.007162661737523105 0.04841316712952879 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 59467 12439 LFQEREHVLRL True PC9_epitope_Rep4 1438.80448202794 1438.80283490379 55.653 3 0.023063591067668598 0.007162661737523105 0.04841453749247275 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 48868 8345 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54806993586 37.083 2 0.023058492415887456 0.007162661737523105 0.04841931758249086 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 85153 2682 QEMQEVQSSR True PC9_epitope_Rep5 1220.5455500336 1220.54444993586 14.819 2 0.02305103821017602 0.007162661737523105 0.04842630676143255 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 142813 15095 YYSPHGHILVL True PC9_epitope_Rep2 1297.68190728377 1297.68025490379 63.321 3 0.023043136152054982 0.007162661737523105 0.04843371677335543 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 22771 18406 ETVWTILP True H1975_Epitope_Rep1 957.5171333744498 957.51658496793 76.71 1 0.023041401246780988 0.007162661737523105 0.04843534377607514 ['ENSG00000198712|ENST00000361739|MT-CO2'] 28788 18788 FSTTVIQNV True PC9_epitope_Rep1 1007.5287606873098 1007.52766993586 77.052 2 0.02303835007222686 0.007162661737523105 0.048438205293295046 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.D78E|1|0.25|ENSG00000100554|chr14:67350616-67350616|G/C|missense_variant'] 55542 7792 LAGPLRPAA True PC9_epitope_Rep2 864.5181364339599 864.51702993586 35.344 2 0.02302738245983613 0.007162661737523105 0.04844849233748758 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 8555 12287 ATVEDLPSA True PC9_epitope_Rep4 901.4392769765699 901.43816993586 55.078 2 0.022994957002088704 0.007162661737523105 0.04847891637955833 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1', 'ENST00000585606.5_1_19:14589230-14590349:-|nuORF'] 70194 21422 LVQDILLNV True PC9_epitope_Rep4 1025.6120963884498 1025.61098993586 90.576 2 0.02297490183724835 0.007162661737523105 0.0484977416479623 ['ENST00000464178.1_1_1:38148797-38151999:-|nuORF', 'ENSG00000116922|ENST00000486637|C1orf109'] 114364 20283 TPSIPVLTA True PC9_epitope_Rep1 897.51713337445 897.51602993586 82.846 2 0.022972565859805758 0.007162661737523105 0.04849993476668095 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 92972 6415 RPKMQEVVA True PC9_epitope_Rep1 1056.5749996870798 1056.57390993586 29.482 2 0.022967248760693816 0.007162661737523105 0.048504927002609985 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000451943.6_1_11:61067610-61070297:-|nuORF', 'ENST00000538470.2_1_11:61067610-61070684:-|nuORF', 'ENST00000540166.5_1_11:61067610-61069753:-|nuORF', 'ENST00000545894.1_1_11:61067610-61068439:-|nuORF'] 101542 18852 SLLGGDVVSV True PC9_epitope_Rep6 944.51786165044 944.51676993586 85.162 2 0.022967228984964425 0.007162661737523105 0.04850494557088583 ['nc|ENSG00000157514|Q99576|TSC22D3'] 95288 9599 RVQDAFAAA True PC9_epitope_Rep5 947.4824792012298 947.48138993586 41.884 2 0.022922523963112687 0.007162661737523105 0.04854693618964582 ['SLC7A5|p.F394Sfs*22|1|0.28|ENSG00000103257|chr16:87836607-87836607|A/-|frameshift_variant', 'ENSG00000103257|ENST00000261622|SLC7A5'] 47999 22311 IYLDGIITI True PC9_epitope_Rep4 1019.59029831471 1019.5897749679301 94.059 1 0.02291275494663545 0.007162661737523105 0.048556116087666 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000172785|Q9BRT8-3|ZNG1A', 'ENST00000431099.3_1_9:160122-173274:-|nuORF', 'ENST00000495302.5_1_9:151417-166034:-|nuORF', 'ENST00000377445.5_9:69238165-69262487:-|nuORF', 'ENST00000492566.1_1_2:114195517-114220159:+|nuORF', 'ENST00000495626.2_9:69245151-69262487:-|nuORF', 'ENST00000476973.2_9:69243634-69261296:-|nuORF', 'ENST00000461037.2_9:69234942-69249581:-|nuORF', 'nc|ENSG00000215126|Q5RIA9-3|ZNG1E'] 134259 17856 VYNENLVHMI True PC9_epitope_Rep4 1230.60669373818 1230.60558993586 76.722 2 0.02290295008414052 0.007162661737523105 0.04856533112640384 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 91934 4547 RKMAQAVTL True NCI_RA007_Epitope_Rep3 1016.5800850675199 1016.57898993586 24.755 2 0.0228947237729506 0.007162661737523105 0.048573063699272244 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'ENST00000488127.1_1_1:25880414-25890333:+|nuORF'] 6984 7172 AQLGEDIR True PC9_epitope_Rep5 900.46649478392 900.46538993586 32.554 2 0.022866321561978313 0.007162661737523105 0.04859976912285328 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 96939 10524 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 51.269 2 0.02284564578102871 0.007162661737523105 0.04861921740757481 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 1322 7465 AEDSPAIGP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 33.693 1 0.02284484607991931 0.007162661737523105 0.04861996976179317 ['ENSG00000012174|ENST00000379484|MBTPS2'] 103321 20684 SPLTSIISA True PC9_epitope_Rep1 887.49639792987 887.49530993586 84.385 2 0.02283206240371217 0.007162661737523105 0.048631997889697874 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 133550 18403 VWSDVTPLTF True NCI_RA007_Epitope_Rep5 1163.58627556343 1163.5857749679299 77.597 1 0.02281647215925344 0.007185103040384438 0.04864667006989519 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 1692 9031 AEGGMTAVV True H1975_Epitope_Rep3 833.3953039896099 833.39475496793 39.733 1 0.022791548270136172 0.007185103040384438 0.0486701339335117 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1'] 24338 17473 EYVSQHLVF True PC9_epitope_Rep2 1120.5553097883198 1120.5542099358602 72.462 2 0.02279127012013831 0.007185103040384438 0.0486703958429135 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 118149 21934 TYIPPLLVAF True PC9_epitope_Rep6 1132.6532329244399 1132.65212993586 97.277 2 0.022774623671162977 0.007185103040384438 0.04868607248115207 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 121796 16887 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 69.782 2 0.022758667226370207 0.0072075401958972465 0.04870110326737984 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 119613 6642 VATVSLPR True NCI_RA007_Epitope_Rep3 841.5021520166499 841.50104993586 33.194 2 0.02273722482534686 0.0072075401958972465 0.048721307855397265 ['CON__P00761'] 134074 8900 VYKPAQNSW True PC9_epitope_Rep2 1091.5399940773498 1091.5388899358602 39.59 2 0.022708441121666253 0.0072075401958972465 0.04874844094161571 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 95052 11193 RTSTGIIGV True PC9_epitope_Rep3 902.5185303567799 902.51742993586 48.058 2 0.022707206219645046 0.0072075401958972465 0.04874960530933095 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 99248 17707 SHNPLANIL True PC9_epitope_Rep4 977.52942939365 977.52832993586 76.134 2 0.022696125615611174 0.007226634650905061 0.04876005405649533 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 92997 6047 RPKPIITSV True PC9_epitope_Rep6 1009.62841515893 1009.62730993586 31.624 2 0.022673337766179632 0.007226634650905061 0.04878154832800917 ['ENSG00000168802|ENST00000448552|CHTF8'] 41198 14076 HVIGSLAEI True PC9_epitope_Rep6 937.5232813840499 937.52218993586 66.015 2 0.022664935158958666 0.007226634650905061 0.048789475945097804 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 48128 22025 IYPDSFTVL True PC9_epitope_Rep5 1053.53826274185 1053.5371699358602 89.747 2 0.02266053203171644 0.007226634650905061 0.04879363059730915 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 47946 20247 IYILDPELL True NCI_RA007_Epitope_Rep5 1087.61651306255 1087.61540993586 84.821 2 0.022658684666362863 0.007226634650905061 0.04879537380092112 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 68624 21965 LTIDDGIFEV True PC9_epitope_Rep4 1120.56520576568 1120.56467496793 92.702 1 0.02264936333142393 0.007226634650905061 0.048804170354234504 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 35526 8147 GSSAINILK True NCI_RA007_Epitope_Rep4 901.5232813840499 901.52218993586 38.127 2 0.02264908718726152 0.007226634650905061 0.048804430971925584 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 21116 17325 ERADPLFL True PC9_epitope_Rep4 959.5076313199099 959.50652993586 74.647 2 0.02264889277802466 0.007226634650905061 0.048804614451011905 ['ENSG00000198060|ENST00000358935|MARCHF5'] 64972 11704 LQFDKAINA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 56.158 2 0.0226098868431881 0.007226634650905061 0.048841439013688245 ['ENSG00000140307|ENST00000396060|GTF2A2'] 109613 6879 TEAEIAHIA True H1975_Epitope_Rep2 953.4818104948898 953.48070993586 31.38 2 0.0226067652450656 0.007226634650905061 0.04884438703997421 ['ENSG00000137312|ENST00000376389|FLOT1'] 114941 8104 TQTGVVQHL True PC9_epitope_Rep1 981.5243440132099 981.52324993586 35.998 2 0.022592717552559885 0.007226634650905061 0.048857655467157084 ['PXYLP1|p.N268Kfs*23|1|0.28|ENSG00000155893|chr3:141292560-141292561|-/A|frameshift_variant', 'nc|ENSG00000155893|Q8TE99-2|PXYLP1', 'ENSG00000155893|ENST00000286353|PXYLP1'] 32930 8937 GIAGSLKTV True PC9_epitope_Rep4 844.5018176634801 844.50072993586 41.918 2 0.022589516920185574 0.007226634650905061 0.048860678971603566 ['ENSG00000008083|ENST00000341776|JARID2'] 91012 6043 RFEELGVK True NCI_RA007_Epitope_Rep4 976.5341804209197 976.53308993586 29.861 2 0.02258639076763569 0.007226634650905061 0.04886363226861727 ['nc|ENSG00000124767|Q04760-2|GLO1', 'ENSG00000124767|ENST00000373365|GLO1'] 48860 8178 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54861496793 36.407 1 0.022583559922605426 0.007226634650905061 0.04886630671503749 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 103127 6339 SPHPPSEVTA True PC9_epitope_Rep1 1020.48762415132 1020.48652993586 29.194 2 0.022582946841055104 0.007226634650905061 0.04886688594111404 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 118334 12038 TYMKDLYQL True NCI_RA007_Epitope_Rep3 1173.5739966275698 1173.57347496793 54.476 1 0.022582272647285944 0.007226634650905061 0.048867522911289124 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 27006 21616 FLEQELETI True PC9_epitope_Rep5 1120.56520576568 1120.5641099358602 88.186 2 0.022564173573187418 0.007226634650905061 0.04888462528599741 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 107589 17206 SVPLKVPGL True PC9_epitope_Rep4 908.5695033004798 908.56840993586 74.188 2 0.022556207191042763 0.007226634650905061 0.04889215454785071 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 139792 7932 YPIEHGIITN True H1975_Epitope_Rep1 1155.5924235730297 1155.5913299358601 35.46 2 0.02254116977071208 0.007226634650905061 0.04890636948990233 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 97676 4990 SEHPPAVP True H1975_Epitope_Rep3 832.40791727864 832.40682993586 24.323 2 0.02253274716878405 0.007226634650905061 0.048914332918811566 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 100174 10941 SITSVFITK True NCI_RA007_Epitope_Rep4 994.5698972233 994.5693449679301 48.948 1 0.02252379059578405 0.007226634650905061 0.04892280239403213 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 34577 12729 GPSVFLFPPK True NCI_RA007_Epitope_Rep5 1087.6066170851898 1087.6055299358602 55.626 2 0.0224781363796032 0.007226634650905061 0.04896599272770071 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 48865 8176 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54861496793 36.428 1 0.022461139625249104 0.007226634650905061 0.04898208030982488 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 72357 22008 MISLEIPQV True PC9_epitope_Rep2 1028.55761828744 1028.55652993586 90.125 2 0.022459176252765688 0.007226634650905061 0.048983938943413685 ['ENSG00000111231|ENST00000228827|GPN3', 'nc|ENSG00000111231|Q9UHW5-2|GPN3', 'nc|ENSG00000111231|Q9UHW5-3|GPN3'] 6279 4619 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 22.639 2 0.022451985511065194 0.007248551443939149 0.048990746586532276 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 45322 21701 IQAGLLSAL True PC9_epitope_Rep5 884.53311779176 884.53202993586 88.52 2 0.022426426442044952 0.007248551443939149 0.049014950335334054 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 133796 12946 VYFPDQHINF True NCI_RA007_Epitope_Rep3 1278.6033226099 1278.6022299358601 58.198 2 0.022424619402567937 0.007248551443939149 0.04901666192999854 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 62136 4292 LLEGEESR True PC9_epitope_Rep4 931.4610750503099 931.45996993586 22.919 2 0.022418629184432947 0.007248551443939149 0.049022336110946085 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT77|p.R467L|1|0.37|ENSG00000189182|chr12:52692448-52692448|C/A|missense_variant', 'KRT1|p.R483S|1|0.49|ENSG00000167768|chr12:52676301-52676301|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 49193 6719 KEMETPLSA True H1975_Epitope_Rep3 1004.4848472699998 1004.48374993586 30.801 2 0.022411654316288675 0.007248551443939149 0.049028943682443225 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF', 'nc|ENSG00000107262|Q99933-4|BAG1', 'nc|ENSG00000107262|Q99933-3|BAG1', 'nc|ENSG00000107262|Q99933-2|BAG1', 'ENSG00000107262|ENST00000634734|BAG1'] 1573 11544 AEEVAPPLP True H1975_Epitope_Rep2 921.4807478657299 921.47964993586 49.464 2 0.022404392001379038 0.007248551443939149 0.04903582435224335 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'RAB11FIP1|p.G778V|1|0.1|ENSG00000156675|chr8:37872469-37872469|C/A|missense_variant', 'ENST00000522774.1_1_8:37728794-37730726:-|nuORF', 'RAB11FIP1|p.P1155Hfs*22|1|0.09|ENSG00000156675|chr8:37871329-37871338|GTCTCCGAGG/-|frameshift_variant'] 6104 15233 APLYQVAAA True PC9_epitope_Rep5 902.4861675993398 902.48561496793 63.603 1 0.02238254386939702 0.007248551443939149 0.04905652918419374 ['ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 47342 22871 IVGDFGIVVV True PC9_epitope_Rep1 1016.5906326678798 1016.58952993586 92.766 2 0.022366856801329014 0.00728496668741499 0.049071399848634976 ['nc|ENSG00000157064|Q9BZQ4-2|NMNAT2', 'ENSG00000157064|ENST00000287713|NMNAT2'] 138514 6961 YHSPGRNVL True PC9_epitope_Rep1 1041.53557740325 1041.5344899358602 31.582 2 0.022361052788270188 0.00728496668741499 0.04907690275448647 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000580540.1_1_17:17720525-17721213:-|nuORF', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 78218 22560 NYGDYFNVF True PC9_epitope_Rep2 1137.47672511445 1137.4761749679299 92.27 1 0.022357889040897305 0.00728496668741499 0.049079902585834945 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 17462 11371 EHFDASHVAL True PC9_epitope_Rep2 1124.5250722892 1124.52343490379 49.06 3 0.022352696797134797 0.00728496668741499 0.0490848261467601 ['ENSG00000164062|ENST00000296456|APEH'] 6551 11362 APTSVLSQSGA True PC9_epitope_Rep5 1016.5138388991599 1016.51274993586 48.7 2 0.02234545224495221 0.00728496668741499 0.04909169650288141 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2'] 56137 11931 LAVHPSGVAL True PC9_epitope_Rep6 962.5549158654999 962.55380993586 57.136 2 0.022342410532561214 0.00728496668741499 0.049094581343308505 ['ENSG00000187608|ENST00000649529|ISG15'] 756 13909 AAVPGKTFVNI True PC9_epitope_Rep6 1115.63389446219 1115.63278993586 65.34 2 0.022333686619056176 0.00728496668741499 0.04910285611675992 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 90196 2820 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 14.915 2 0.022325943648539733 0.00728496668741499 0.0491102014229595 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 8527 19238 ATSVTFVGV True PC9_epitope_Rep5 879.4701831820299 879.46908993586 79.038 2 0.022325112507493434 0.00728496668741499 0.04911098993256414 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 110357 7618 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 34.255 2 0.022312777964107283 0.00728496668741499 0.04912269304382853 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 104049 3842 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 20.948 2 0.022310773674143688 0.00728496668741499 0.04912459494919892 ['ENSG00000130935|ENST00000253247|NOL11'] 35383 10509 GSDDGVLAY True H1975_Epitope_Rep1 895.3923267841499 895.39177496793 45.375 1 0.022306902720343646 0.00728496668741499 0.049128268337741164 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 34699 7440 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.995 2 0.02229722090291113 0.00728496668741499 0.04913745701748919 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 4155 8151 AHTAGVVL True PC9_epitope_Rep5 766.43373810366 766.43264993586 36.292 2 0.022292440420870092 0.00728496668741499 0.04914199453631185 ['ENSG00000183751|ENST00000568546|TBL3'] 1488 5997 AEELASGHLA True H1975_Epitope_Rep2 996.4876241513199 996.48652993586 28.047 2 0.022287610221580982 0.00728496668741499 0.04914657959998208 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 48061 18850 IYMDTLNIF True NCI_RA007_Epitope_Rep3 1128.5525329069999 1128.5514299358601 82.429 2 0.02228381199547687 0.00728496668741499 0.04915018531397976 ['ENSG00000165678|ENST00000372134|GHITM'] 90898 5084 REWVAPEKA True NCI_RA007_Epitope_Rep4 1084.5665431783598 1084.5654499358602 26.064 2 0.022280142303048093 0.00728496668741499 0.04915366921825324 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5'] 119762 18308 VAYLDPLEL True NCI_RA007_Epitope_Rep4 1031.5539128059897 1031.55337496793 79.201 1 0.02227876051550675 0.00728496668741499 0.049154981102342996 ['ENSG00000187244|ENST00000270233|BCAM'] 17378 8244 EHDPHVLLA True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 37.067 2 0.022278705701802938 0.00728496668741499 0.049155033143669626 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 6509 8344 APTAITEA True PC9_epitope_Rep5 772.3966838886 772.39613496793 37.036 1 0.02227850672304369 0.00728496668741499 0.049155222058831764 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 17327 18965 EHAPSIIFM True PC9_epitope_Rep4 1043.5110024481899 1043.5099099358602 81.039 2 0.02225673356933279 0.00728496668741499 0.04917589766171348 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 25631 5240 FENVGSPKP True H1975_Epitope_Rep1 973.4868958753299 973.48578993586 25.219 2 0.022255189989605264 0.00728496668741499 0.049177363706859205 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 111338 4118 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 22.157 2 0.022252176185111203 0.00728496668741499 0.049180226231743285 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 47682 19666 IYADLNQNDF True PC9_epitope_Rep2 1211.5458673034302 1211.5447699358601 81.031 2 0.02222607606824349 0.00728496668741499 0.04920502204301013 ['ENSG00000064763|ENST00000536681|FAR2', 'FAR2|p.A81D|1|0.21|ENSG00000064763|chr12:29293352-29293352|C/A|missense_variant'] 126546 22327 VLLNEILEQV True PC9_epitope_Rep4 1168.67033954056 1168.66924993586 94.119 2 0.02218406290224473 0.00728496668741499 0.0492449575421913 ['ENSG00000109805|ENST00000251496|NCAPG'] 6291 6229 APRGTGIVSA True PC9_epitope_Rep1 927.5137793295098 927.51268993586 28.773 2 0.02218162631522124 0.00728496668741499 0.049247274460969145 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 139793 8091 YPIEHGIITN True H1975_Epitope_Rep3 1155.5924235730297 1155.5913299358601 36.096 2 0.022168206187281818 0.00728496668741499 0.04926003711192354 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 109805 5638 TEEDTPLKP True H1975_Epitope_Rep3 1028.5026055091198 1028.5015099358602 26.724 2 0.022166656619849102 0.00728496668741499 0.049261510940487904 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4'] 118451 17047 TYPIKTPTF True PC9_epitope_Rep3 1066.5698972233001 1066.5688099358601 70.725 2 0.022160296191910085 0.00728496668741499 0.04926756087168771 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 42408 5744 IEDINDHTP True H1975_Epitope_Rep3 1052.4774533904401 1052.47634993586 27.12 2 0.022153612332607243 0.00728496668741499 0.04927391911185698 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 86867 5210 QLRASLQDL True NCI_RA007_Epitope_Rep4 1042.5771078620598 1042.5760099358602 26.575 2 0.02214680743467765 0.00728496668741499 0.049280393195766076 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 129370 17415 VRDPRPWLL True PC9_epitope_Rep5 1150.66111226954 1150.65946490379 71.988 3 0.022141559552226946 0.00728496668741499 0.049285386440731424 ['ENST00000529462.5_1_8:145637924-145638077:-|nuORF', 'ENST00000527148.5_1_8:145635301-145638951:-|nuORF', 'nc|ENSG00000147804|Q6P5W5-2|SLC39A4', 'ENSG00000147804|ENST00000301305|SLC39A4'] 137863 9196 YESSTASALVA True NCI_RA007_Epitope_Rep5 1097.52406922969 1097.5229699358601 42.023 2 0.022132542730332376 0.00728496668741499 0.0492939667323671 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 121182 7876 VESGVPQPP True H1975_Epitope_Rep1 908.4603467743198 908.45924993586 35.245 2 0.02212176223035949 0.00728496668741499 0.049304226949453286 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 15039 11381 DYMKTTSNF True PC9_epitope_Rep4 1105.47501086229 1105.47390993586 51.549 2 0.022101382605842674 0.00728496668741499 0.04932362787995772 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 22896 14457 EVDTFMEAY True H1975_Epitope_Rep2 1103.44812740811 1103.4470299358602 60.765 2 0.0220987376386842 0.00728496668741499 0.04932614629324993 ['ENST00000357802.6_1_22:42970741-42976277:-|nuORF', 'ENSG00000189306|ENST00000323013|RRP7A'] 78001 21029 NVPEGLLATV True PC9_epitope_Rep5 1011.56006081559 1011.5594749679301 85.945 1 0.02207888714654432 0.00728496668741499 0.04934505041409721 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 29505 24110 FVFPGELLL True PC9_epitope_Rep3 1033.5848190114498 1033.58427496793 98.021 1 0.022072807072027932 0.00728496668741499 0.049350841827571 ['ENSG00000105281|ENST00000542575|SLC1A5'] 90655 11684 REQDLILAV True NCI_RA007_Epitope_Rep3 1055.5975089534697 1055.59640993586 53.075 2 0.022072658784507284 0.00728496668741499 0.0493509830819766 ['ENSG00000177303|ENST00000321617|CASKIN2'] 77190 6763 NRSDPVTL True PC9_epitope_Rep6 900.46649478392 900.46538993586 34.827 2 0.022064340505254316 0.00728496668741499 0.0493589073732351 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 13562 18540 DPDLNAVLY True H1975_Epitope_Rep2 1018.49712620586 1018.49602993586 76.938 2 0.022060110301594923 0.00728496668741499 0.049362937623209285 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4'] 114370 19368 TPSIPVLTA True PC9_epitope_Rep4 897.51713337445 897.51602993586 82.61 2 0.02205748767359292 0.00728496668741499 0.04936543642210639 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 1157 7793 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 34.924 1 0.02204367527625298 0.00728496668741499 0.04937859839532988 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 101698 14296 SLMKDFPGA True PC9_epitope_Rep4 964.4688032830398 964.46770993586 62.89 2 0.022032796458204294 0.00728496668741499 0.04938896698704261 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 114546 14168 TQAPPNVVL True PC9_epitope_Rep6 937.5232813840499 937.52218993586 66.369 2 0.02202327932584682 0.00728496668741499 0.04939803924319273 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 90700 5217 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 25.135 3 0.02201656586867409 0.00728496668741499 0.04940443971547115 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 106830 8666 SVAQPIHL True H1975_Epitope_Rep2 863.48650195251 863.48540993586 38.292 2 0.022013352921023393 0.00728496668741499 0.04940750311798386 ['nc|ENSG00000161888|Q8NBT2-2|SPC24', 'ENST00000423327.2_1_19:11257861-11259987:-|nuORF', 'ENSG00000161888|ENST00000592540|SPC24'] 77281 17076 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.5178299358602 70.949 2 0.022010771742514253 0.00728496668741499 0.04940996427125507 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 134589 19759 VYSGGVYLF True PC9_epitope_Rep6 1003.5014833103099 1003.50097496793 88.662 1 0.022009266037459965 0.00728496668741499 0.049411400007883334 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 95856 18736 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.6263299358602 77.29 2 0.022006034130283934 0.00728496668741499 0.04941448184918827 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 21419 17117 ERIPDVAAL True PC9_epitope_Rep3 982.5447451046199 982.54364993586 70.994 2 0.021983085085562896 0.00728496668741499 0.04943636991061436 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 21301 9660 EREKWIHAL True PC9_epitope_Rep2 1180.63529144452 1180.6336349037902 42.496 3 0.02197927424629868 0.00728496668741499 0.049440005347587634 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 5659 6073 APAEEPAAAAA True PC9_epitope_Rep2 967.4610750503098 967.45996993586 28.754 2 0.021978749615494432 0.00728496668741499 0.0494405058485205 ['ENSG00000277443|ENST00000612661|MARCKS'] 111468 9873 THTTPVLL True PC9_epitope_Rep6 880.5018176634799 880.50072993586 48.468 2 0.021975471722421584 0.00728496668741499 0.049443633073627286 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 100942 8533 SLFGSPVAK True NCI_RA007_Epitope_Rep5 904.50181766348 904.50072993586 39.506 2 0.021953512088904895 0.00728496668741499 0.049464587580122045 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 17709 9643 EHNIFHNEV True PC9_epitope_Rep3 1137.5203212619301 1137.51868490379 42.04 3 0.0219478560032232 0.00728496668741499 0.04946998597435682 ['ENSG00000118898|ENST00000345988|PPL'] 305 10522 AAHIFNEAL True NCI_RA007_Epitope_Rep4 984.50288029264 984.50178993586 47.32 2 0.021934095641774995 0.00728496668741499 0.04948312146021246 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 106419 5898 STIKEVAQA True PC9_epitope_Rep1 945.5131106231698 945.51200993586 27.502 2 0.021932490639934257 0.00728496668741499 0.04948465376582046 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 109728 3823 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 19.722 2 0.021917919564928875 0.007304147465437788 0.0494985666711847 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 17560 11296 EHGPENIVM True PC9_epitope_Rep5 1024.46478053176 1024.4636899358602 48.443 2 0.0219116081062023 0.007304147465437788 0.04950459405383495 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 72779 18519 MPAGSFITA True PC9_epitope_Rep1 893.43168949833 893.43058993586 76.023 2 0.021910336714614703 0.007304147465437788 0.049505808294511094 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 97410 11189 SEDYPAALP True H1975_Epitope_Rep1 961.4392769765699 961.43872496793 48.007 1 0.021882469247551425 0.007304147465437788 0.049532429302009386 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 35273 7301 GRFADSHEL True PC9_epitope_Rep1 1030.4832074772198 1030.48210993586 32.896 2 0.021877312780482154 0.007304147465437788 0.04953735643529613 ['nc|ENSG00000121680|Q9Y5Y5-2|PEX16', 'ENSG00000121680|ENST00000378750|PEX16'] 79277 7330 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 37.366 2 0.021875803284716683 0.007304147465437788 0.049538798873404184 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 89094 12347 QVPEKLDVV True PC9_epitope_Rep2 1025.5757108797297 1025.57460993586 52.802 2 0.021875602555322136 0.007304147465437788 0.04953899068825224 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000490291.1_1_2:85578731-85581633:-|nuORF'] 46338 13645 ISQVQVVL True NCI_RA007_Epitope_Rep4 884.5331177917599 884.53256496793 59.706 1 0.021840289146354958 0.007304147465437788 0.049572745417515884 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 39429 5823 HKVPGDVSL True NCI_RA007_Epitope_Rep1 950.5185303567799 950.51742993586 26.705 2 0.021816520722856367 0.007304147465437788 0.04959547550856696 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 12759 12579 DLEKEAPWEY True H1975_Epitope_Rep3 1278.57683307854 1278.5757299358602 53.587 2 0.021808165153962104 0.007304147465437788 0.049603468120215606 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ENSG00000125257|ENST00000645237|ABCC4'] 11218 4705 DEDKEKTFEEK True NCI_RA007_Epitope_Rep5 1396.6358045066397 1396.63414490379 24.785 3 0.021798276981958756 0.007304147465437788 0.04961292814422997 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 48993 7984 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 37.397 2 0.021795575091431627 0.007304147465437788 0.049615513306575584 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 31917 12147 GEMEPPALP True H1975_Epitope_Rep3 939.4371688015898 939.43661496793 51.891 1 0.02179388872228306 0.007304147465437788 0.04961712687729189 ['ENSG00000100726|ENST00000262319|TELO2'] 17611 7703 EHINSVSAM True PC9_epitope_Rep1 986.44913046762 986.44802993586 34.45 2 0.02178986131844408 0.007304147465437788 0.04962098059974226 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 95912 13475 RYLEGTSCI True PC9_epitope_Rep5 1040.4960806600398 1040.49498993586 56.849 2 0.02178786684420506 0.007304147465437788 0.04962288915463453 ['ENSG00000261150|ENST00000615648|EPPK1'] 53346 4810 KQQAPPPPP True NCI_RA007_Epitope_Rep3 958.5236157372198 958.52250993586 25.887 2 0.02177135402070458 0.007304147465437788 0.049638692972339256 ['ENSG00000125398|ENST00000245479|SOX9'] 121892 17189 VFQFLNAK True PC9_epitope_Rep3 965.5334521449298 965.53234993586 71.274 2 0.021767746011117382 0.007304147465437788 0.0496421466230864 ['ENSG00000114391|ENST00000394077|RPL24'] 89256 15810 QVVGKLIEV True PC9_epitope_Rep5 983.6015317047498 983.60042993586 65.803 2 0.02176181419533499 0.007304147465437788 0.04964782509662593 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 3194 11822 AGEGLLAVQ True NCI_RA007_Epitope_Rep5 856.4654321547598 856.4648849679301 52.131 1 0.02175966892167116 0.007304147465437788 0.04964987888066956 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 141848 5991 YVDGVEVHNA True NCI_RA007_Epitope_Rep4 1101.50908787189 1101.50798993586 29.662 2 0.021728246612534474 0.007304147465437788 0.0496799692170561 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 84207 21779 PYLDSFYEY True PC9_epitope_Rep3 1195.5073565363898 1195.50677496793 89.071 1 0.021726009377884596 0.007304147465437788 0.04968211219478164 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 64242 12168 LPHDLAVQA True PC9_epitope_Rep3 962.5185303567799 962.51742993586 51.841 2 0.021709923228494184 0.007304147465437788 0.04969752288183307 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1', 'ENST00000487671.1_1_22:31840579-31845472:-|nuORF'] 7645 19847 ASIDILHSI True PC9_epitope_Rep2 967.5338460677501 967.53274993586 81.734 2 0.021707254225573278 0.007304147465437788 0.04970008019688031 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 80987 19968 PIIGSLFL True H1975_Epitope_Rep1 858.5214904789 858.5209449679301 83.111 1 0.021694932141085126 0.007326682487385665 0.04971188806639433 ['ENSG00000108784|ENST00000225927|NAGLU'] 87558 13928 QQLEPVTGQV True PC9_epitope_Rep5 1097.57168812845 1097.5705899358602 58.595 2 0.021667531431016167 0.007326682487385665 0.04973815367257984 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 120121 13459 VEADGAWVV True H1975_Epitope_Rep3 944.4603467743199 944.4597949679301 57.043 1 0.021656016189326836 0.007326682487385665 0.04974919532542523 ['ENSG00000211455|ENST00000389032|STK38L', 'nc|ENSG00000211455|Q9Y2H1-2|STK38L'] 106426 5878 STIKEVAQA True PC9_epitope_Rep5 945.5131106231698 945.51200993586 27.601 2 0.021646975279066616 0.00734955303658649 0.04975786583685385 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 88766 14092 QTPQRLLEV True PC9_epitope_Rep3 1082.6084079903399 1082.60730993586 59.289 2 0.02162013338400975 0.007371233760250622 0.04978361544217547 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 90463 7466 REKMFVEEV True NCI_RA007_Epitope_Rep3 1165.58014463717 1165.5790499358602 36.487 2 0.021619471037482435 0.007371233760250622 0.04978425097552975 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 96438 16001 SAAFPGASL True PC9_epitope_Rep6 819.41266830591 819.41156993586 73.861 2 0.021617358006297313 0.007371233760250622 0.04978627851186551 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 71127 21407 LYLPSFFTY True NCI_RA007_Epitope_Rep2 1149.57464825057 1149.57354993586 88.586 2 0.02161640729500805 0.007371233760250622 0.049787190779039904 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 39904 19045 HPFGFVAV True PC9_epitope_Rep3 872.4544735482399 872.45336993586 78.477 2 0.02160694568275067 0.007371233760250622 0.049796270547299376 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 45147 15864 IPNPAQTSVVV True PC9_epitope_Rep6 1123.62372370131 1123.62262993586 73.294 2 0.021606520021434837 0.007371233760250622 0.0497966790624743 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 83602 17114 PVCPPGGIQEV True PC9_epitope_Rep5 1094.5430308524599 1094.54192993586 70.851 2 0.021604877479318857 0.007371233760250622 0.049798255467165584 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 38967 19091 HHIYLEGTLL True PC9_epitope_Rep1 1194.6397081186199 1194.6386099358601 78.224 2 0.021581878757168646 0.007371233760250622 0.04982033249586315 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 133608 24353 VYADGIFDLF True PC9_epitope_Rep5 1158.55972646242 1158.55917496793 98.707 1 0.021571049077810062 0.007393247040397992 0.049830730983199414 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF'] 89592 7028 QYNPVKQQL True NCI_RA007_Epitope_Rep4 1116.5927579262 1116.5916699358602 33.66 2 0.021554497297837597 0.007393247040397992 0.04984662722633689 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 140762 17054 YSDFFTDCY True H1975_Epitope_Rep2 1159.41682727983 1159.41572993586 70.857 2 0.021546708099668785 0.007393247040397992 0.04985410938971785 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 114581 15068 TQDGNIYQL True PC9_epitope_Rep6 1050.4981888350198 1050.49708993586 70.013 2 0.02154409500031805 0.007393247040397992 0.04985661969492336 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 94788 8675 RSPATVEV True PC9_epitope_Rep4 857.4606811274899 857.45958993586 40.858 2 0.021543918375718077 0.007393247040397992 0.04985678937525179 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5'] 46564 14751 ITAGKLVTL True PC9_epitope_Rep2 914.58006798418 914.57896993586 62.006 2 0.02153684033996208 0.007393247040397992 0.04986358952195335 ['ENSG00000139410|ENST00000403593|SDSL', 'SDSL|p.D221G|1|0.21|ENSG00000139410|chr12:113435547-113435547|A/G|missense_variant'] 23115 16430 EVISKLYAV True PC9_epitope_Rep5 1020.5855472874398 1020.58444993586 68.197 2 0.021513791177613362 0.007412693662377127 0.04988573909839113 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 26520 17779 FIGAGAATVGV True PC9_epitope_Rep4 961.5232813840499 961.52218993586 76.416 2 0.021504103377112768 0.007412693662377127 0.04989505123363359 ['ENST00000497075.5_1_2:176043783-176046391:-|nuORF', 'ENST00000513781.5_1_17:46970480-46973128:+|nuORF', 'ENST00000502964.5_1_17:46971694-46973128:+|nuORF', 'ENSG00000159199|ENST00000393366|ATP5MC1', 'ENSG00000135390|ENST00000394349|ATP5MC2', 'ENSG00000154518|ENST00000284727|ATP5MC3', 'nc|ENSG00000135390|Q06055-3|ATP5MC2', 'nc|ENSG00000135390|Q06055-2|ATP5MC2'] 97375 4749 SEDPKNNIP True H1975_Epitope_Rep3 1012.48253877088 1012.48144993586 23.393 2 0.02150250839495789 0.007412693662377127 0.049896584505397586 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 95675 19135 RYFDVGLHNF True PC9_epitope_Rep5 1266.6145559999397 1266.6134499358602 78.638 2 0.02149785712978268 0.007412693662377127 0.04990105603512793 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 98864 20251 SGVEVLVSV True PC9_epitope_Rep2 887.4963979298699 887.4958449679301 83.315 1 0.02149460098323383 0.007412693662377127 0.04990418655490978 ['ENSG00000198695|ENST00000361681|MT-ND6'] 66803 10943 LSLTPEQWKS True NCI_RA007_Epitope_Rep4 1187.6186383208699 1187.61754993586 48.955 2 0.021463891181956133 0.007412693662377127 0.049933719555874535 ['nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5'] 104246 13638 SQIDKLLHV True PC9_epitope_Rep6 1051.60259433391 1051.6014899358602 64.227 2 0.021458905512450072 0.007412693662377127 0.04993851554419118 ['SERPINB7|p.H323Qfs*5|1|0.67|ENSG00000166396|chr18:63804461-63804461|C/-|frameshift_variant', 'ENSG00000166396|ENST00000398019|SERPINB7'] 48513 12025 KAINVFVSA True PC9_epitope_Rep6 947.54401682863 947.54290993586 57.547 2 0.021457953432184144 0.007412693662377127 0.049939431445814746 ['ENSG00000114209|ENST00000392750|PDCD10'] 31811 9758 GEIINNTVP True NCI_RA007_Epitope_Rep4 955.4974605590301 955.49636993586 44.383 2 0.021451905209123413 0.007412693662377127 0.049945250164922926 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000557781.5_1_12:57498159-57499088:-|nuORF'] 133865 18448 VYGPLPQSF True PC9_epitope_Rep6 1006.5123823471798 1006.51187496793 83.603 1 0.0214349912040868 0.007412693662377127 0.04996152534654394 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 78653 14497 NYVEKGFQI True PC9_epitope_Rep4 1096.5553097883198 1096.5542099358602 63.674 2 0.021430627850888638 0.007412693662377127 0.04996572461549528 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 16119 9337 EEALPVTTA True H1975_Epitope_Rep3 929.47057710485 929.47002496793 40.914 1 0.021405130011099144 0.007412693662377127 0.049990269470156785 ['ENSG00000184897|ENST00000333762|H1-10'] 26906 14950 FLDGNEMTL True NCI_RA007_Epitope_Rep4 1038.46919720586 1038.46867496793 64.97 1 0.021395017989473367 0.007412693662377127 0.05000000632687989 ['ENSG00000169504|ENST00000374379|CLIC4'] 85975 11582 QHIQVTNEI True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 49.876 2 0.0213701759913827 0.007412693662377127 0.05002393335377664 ['nc|ENSG00000120156|Q02763-3|TEK', 'nc|ENSG00000120156|Q02763-2|TEK', 'ENSG00000120156|ENST00000380036|TEK'] 90502 4376 RELEVQHPAA True NCI_RA007_Epitope_Rep4 1148.59382055536 1148.59272993586 23.182 2 0.02136792697013549 0.007412693662377127 0.05002610000930576 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 61355 16562 LISQIVSSITA True NCI_RA007_Epitope_Rep1 1130.6546894764201 1130.65358993586 68.539 2 0.021356592214593274 0.007412693662377127 0.05003702083936431 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 39954 12243 HPKYSDMIVA True PC9_epitope_Rep3 1159.56957995347 1159.56848993586 52.122 2 0.021355502720862687 0.007412693662377127 0.050038070650986546 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 1227 8570 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.4074249679301 37.917 1 0.021339907796861717 0.007412693662377127 0.050053099573592996 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 1300 7850 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 35.173 1 0.021329180159504767 0.007412693662377127 0.0500634400388325 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 142576 19493 YYLNLIEL True NCI_RA007_Epitope_Rep4 1039.5589981864298 1039.55847496793 84.243 1 0.021328774989314313 0.007412693662377127 0.0500638306207551 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 130096 10267 VSDNGPCLGY True H1975_Epitope_Rep2 1023.4331460503099 1023.43257496793 44.498 1 0.02132658102670023 0.007412693662377127 0.05006594563307416 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 62949 7851 LLPGELAK True NCI_RA007_Epitope_Rep1 839.5116540711899 839.51054993586 34.529 2 0.021310364670560727 0.007426994711427914 0.05008158074084142 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 36934 13436 GVLSDLTK True H1975_Epitope_Rep3 831.47018318203 831.46963496793 56.952 1 0.021297358279313845 0.007426994711427914 0.05009412386963231 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 13996 7607 DRDSGGPVL True PC9_epitope_Rep2 914.4457593393399 914.44466993586 34.633 2 0.021296586422610588 0.007426994711427914 0.050094868316287115 ['ENST00000471909.1_1_21:45217249-45223652:+|nuORF', 'ENST00000467112.5_1_21:45213150-45223652:+|nuORF', 'ENSG00000160214|ENST00000497547|RRP1'] 35060 8255 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42828993586 39.214 2 0.021293828263033332 0.007426994711427914 0.05009752860362323 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 70097 19502 LVPDVVNEV True PC9_epitope_Rep2 982.53351171458 982.53240993586 80.397 2 0.021280955847910354 0.007426994711427914 0.0501099457973933 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 27968 18364 FQGVEFHYV True PC9_epitope_Rep2 1124.5290950404801 1124.5279899358602 75.966 2 0.021261600078075434 0.007426994711427914 0.050128621878288517 ['ENSG00000143815|ENST00000272163|LBR'] 95260 8970 RVNKAFVNV True PC9_epitope_Rep3 1045.6032630402499 1045.60216993586 39.45 2 0.021251727469451254 0.007426994711427914 0.05013815003012781 ['ENSG00000176731|ENST00000619594|RBIS'] 10070 15000 AYSTVPGYYSW True NCI_RA007_Epitope_Rep3 1292.57135377528 1292.5702499358601 66.465 2 0.02122900410266738 0.007426994711427914 0.0501600862887915 ['nc|ENSG00000165806|P55210-4|CASP7', 'ENSG00000165806|ENST00000369318|CASP7', 'nc|ENSG00000165806|P55210-3|CASP7'] 34815 19439 GQIEVVPEV True PC9_epitope_Rep1 968.5178616504398 968.51731496793 79.586 1 0.021225878802191248 0.007426994711427914 0.050163103956119316 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 35200 9823 GRAEAYVL True PC9_epitope_Rep2 877.46576650793 877.46466993586 43.119 2 0.021191275290651897 0.007426994711427914 0.050196525820954505 ['ENSG00000068654|ENST00000263857|POLR1A'] 130219 9832 VSEVSSLNY True H1975_Epitope_Rep1 996.4763907612801 996.47584496793 42.748 1 0.021186919112153545 0.007426994711427914 0.050200734553650504 ['ENSG00000117000|ENST00000372771|RLF'] 31910 12206 GEMEPPALP True H1975_Epitope_Rep1 939.4371688015898 939.43661496793 51.971 1 0.021169352982613514 0.007426994711427914 0.050217709085796224 ['ENSG00000100726|ENST00000262319|TELO2'] 107213 14358 SVIQGHQIIAV True PC9_epitope_Rep4 1163.66625721963 1163.6651699358601 63.135 2 0.021136124775203026 0.007426994711427914 0.05024983125355846 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 2731 11609 AETAVSVIP True H1975_Epitope_Rep3 885.48074786573 885.4801949679301 49.786 1 0.021117510014348483 0.007426994711427914 0.05026783385223374 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 89150 10088 QVRDVIIAA True PC9_epitope_Rep6 983.5763795860698 983.57528993586 49.405 2 0.021097714325381007 0.007426994711427914 0.05028698441589672 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 7238 22297 ARDEIIWLL True PC9_epitope_Rep5 1127.63389446219 1127.63337496793 90.772 1 0.021095911507269065 0.007426994711427914 0.05028872878242207 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 108032 19271 SYADAFQFL True NCI_RA007_Epitope_Rep5 1060.4865615221602 1060.48546993586 80.994 2 0.021085264530286855 0.007426994711427914 0.05029903158348671 ['ENSG00000242732|ENST00000609883|RTL5'] 108080 14695 SYANVQDGF True PC9_epitope_Rep4 999.4297749220299 999.42866993586 64.458 2 0.021079989641913887 0.007426994711427914 0.050304136603816677 ['ENSG00000152766|ENST00000371930|ANKRD22'] 135197 15900 WESEPHPYVFF True H1975_Epitope_Rep1 1436.6401020414398 1436.63900993586 66.469 2 0.02105292392338299 0.007426994711427914 0.050330337484353546 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 127725 12995 VPAPSPLSA True PC9_epitope_Rep2 837.45961849833 837.45852993586 55.272 2 0.02104908557836988 0.007426994711427914 0.05033405409839663 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 1601 4923 AEFAEVSK True PC9_epitope_Rep6 879.43379767331 879.43270993586 26.496 2 0.02104562505688234 0.007426994711427914 0.05033740506658561 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 128847 10601 VQDESHSEWV True PC9_epitope_Rep5 1214.52038083158 1214.5192899358601 45.764 2 0.021042781212738344 0.007426994711427914 0.0503401590187904 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF'] 114857 15959 TQNPNYYNL True PC9_epitope_Rep5 1125.5090878718902 1125.50798993586 66.376 2 0.02103442065924146 0.007426994711427914 0.050348256025033726 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 41019 13059 HTGPVFTV True PC9_epitope_Rep3 856.44430278736 856.44320993586 55.258 2 0.021017403339793874 0.007426994711427914 0.050364740250846377 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 100940 8777 SLFGSPVAK True NCI_RA007_Epitope_Rep4 904.50181766348 904.50072993586 40.565 2 0.02101232707830991 0.007426994711427914 0.05036965835767543 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 2834 12947 AEVDDILAA True H1975_Epitope_Rep3 915.4549270407099 915.4543749679301 55.031 1 0.020989912677846754 0.007426994711427914 0.05039137918528458 ['ENST00000482031.5_1_2:238973007-238991399:+|nuORF', 'nc|ENSG00000132330|Q96I15-2|SCLY', 'ENSG00000132330|ENST00000254663|SCLY'] 96417 18034 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41211496793 74.159 1 0.020981622416451094 0.007426994711427914 0.05039941488798384 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 36521 4917 GVGPVPARA True PC9_epitope_Rep4 822.47118624154 822.47008993586 25.508 2 0.02097303779524338 0.007426994711427914 0.050407737032296014 ['ENSG00000129636|ENST00000320640|ITFG1'] 34728 6581 GQEDHYNNL True PC9_epitope_Rep5 1088.45230127176 1088.4517749679299 30.284 1 0.020971274061587587 0.007426994711427914 0.05040944698052554 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 73148 11619 MRSDTPAML True PC9_epitope_Rep1 1020.47323704048 1020.47212993586 49.57 2 0.020966546948815872 0.007426994711427914 0.05041403017632476 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 26636 19915 FIPPDGNFRL True PC9_epitope_Rep1 1174.61349337078 1174.6123899358602 81.421 2 0.020951648957291145 0.007426994711427914 0.05042847685996333 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 79270 8181 PAPPPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 38.928 2 0.020910282632488262 0.007426994711427914 0.05046860807282069 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 78142 14094 NYAAALETF True NCI_RA007_Epitope_Rep3 998.47091145802 998.46980993586 62.733 2 0.02088209181483207 0.007426994711427914 0.05049597234624099 ['ENST00000379514.2_1_9:33503785-33510678:-|nuORF', 'ENSG00000165416|ENST00000310528|SUGT1', 'nc|ENSG00000165416|Q9Y2Z0|SUGT1'] 109637 9372 TEALHFVAA True H1975_Epitope_Rep3 957.4919812557698 957.49088993586 41.049 2 0.020876804968243064 0.007426994711427914 0.05050110555447804 ['ENSG00000125817|ENST00000379751|CENPB'] 9950 20016 AYNDNWFITF True NCI_RA007_Epitope_Rep3 1289.57168812845 1289.5705899358602 87.229 2 0.020859938804094518 0.007426994711427914 0.05051748447226118 ['ENSG00000107929|ENST00000316157|LARP4B'] 87784 13474 QRDGIITQL True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 57.109 2 0.02085947821978013 0.007426994711427914 0.05051793181254971 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF', 'AKAP9|p.V1050Wfs*10|1|0.45|ENSG00000127914|chr7:92003064-92003064|G/-|frameshift_variant', 'AKAP9|p.K291Efs*9|1|0.09|ENSG00000127914|chr7:91995734-91995735|-/A|frameshift_variant', 'AKAP9|p.H562Qfs*4|1|0.07|ENSG00000127914|chr7:92001602-92001603|AT/-|frameshift_variant'] 137020 21620 YALDLSTFL True PC9_epitope_Rep6 1041.53826274185 1041.5371699358602 96.04 2 0.020858779609097915 0.007426994711427914 0.05051861034106759 ['ENSG00000137331|ENST00000259874|IER3'] 30322 6937 GAAKDLPGV True PC9_epitope_Rep6 826.4548674710599 826.45376993586 35.626 2 0.020852155364724484 0.007426994711427914 0.050525044541446705 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 47960 21089 IYIWDLNNF True NCI_RA007_Epitope_Rep1 1196.5866099165999 1196.58550993586 86.288 2 0.020818629472383488 0.007426994711427914 0.05055761902818721 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 37517 9865 GVVDPVHGV True PC9_epitope_Rep4 877.46576650793 877.46466993586 45.597 2 0.020808017385276333 0.007426994711427914 0.050567933590883185 ['ENSG00000261150|ENST00000615648|EPPK1'] 26749 8426 FKDLGEEHFK True PC9_epitope_Rep5 1248.6138872935996 1248.61278993586 37.351 2 0.020798023905561323 0.007426994711427914 0.050577648484895966 ['CON__P02769'] 1454 7483 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40140993586 33.731 2 0.020796799371759486 0.007426994711427914 0.05057883898910134 ['ENSG00000173545|ENST00000308683|ZNF622'] 85304 8146 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.57184490379 36.283 3 0.020783088358950062 0.007426994711427914 0.05059217056169124 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 117195 12782 TVLGSLQKV True PC9_epitope_Rep4 943.57023157647 943.56912993586 57.028 2 0.020773558901758738 0.007426994711427914 0.050601438015575 ['ENSG00000176092|ENST00000308182|CRYBG2', 'ENST00000520372.5_1_1:26655223-26662846:-|nuORF'] 27340 9517 FLSKLQDD True PC9_epitope_Rep1 964.48656152216 964.48546993586 41.462 2 0.020754722155329395 0.007426994711427914 0.05061976100444101 ['ENSG00000135392|ENST00000678005|DNAJC14'] 105050 5364 SRDPSAPRL True PC9_epitope_Rep5 997.5304920228099 997.52938993586 25.647 2 0.020752291200835313 0.007426994711427914 0.050622126057241874 ['ENSG00000075643|ENST00000261326|MOCOS'] 8070 7274 ATDRFRSLY True H1975_Epitope_Rep2 1127.5723568347898 1127.57071490379 32.915 3 0.020739673664501756 0.007426994711427914 0.05063440301160027 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-10|DST'] 31579 12727 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47511496793 54.057 1 0.02073958596426796 0.007426994711427914 0.05063448835320087 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 72337 24416 MIPLLLAAL True PC9_epitope_Rep5 953.5983609006099 953.59781496793 98.954 1 0.020729367865768015 0.007426994711427914 0.05064443245980045 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 138256 6836 YGYGHESEL True H1975_Epitope_Rep3 1053.44033960573 1053.43924993586 31.25 2 0.020720087360911032 0.007426994711427914 0.05065346551661478 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 20181 9157 ENGSLYDY True H1975_Epitope_Rep2 959.38724140371 959.3866949679301 40.174 1 0.02069675547720551 0.007426994711427914 0.050676181197194546 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 104799 22983 SQYPEIIFL True PC9_epitope_Rep2 1108.580461907 1108.57936993586 93.899 2 0.020666019749291182 0.007449645911891842 0.050706118071481975 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 17314 9593 EHALGTPEV True PC9_epitope_Rep3 951.4661604307499 951.46506993586 41.852 2 0.02066137614756211 0.007449645911891842 0.050710642255475 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 30158 20710 FYPPKVELF True PC9_epitope_Rep1 1138.60628273202 1138.6051899358602 84.488 2 0.020590480439218992 0.007495459039385648 0.05077975631996315 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 103859 7128 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 34.691 2 0.020577951140497888 0.007515340948265956 0.0507919788639841 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 115112 7318 TRDETNYGI True PC9_epitope_Rep6 1067.4883524273098 1067.48724993586 37.317 2 0.020567756596041542 0.007515340948265956 0.05080192561405696 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 39910 18930 HPFGFVAV True PC9_epitope_Rep5 872.4544735482399 872.45336993586 77.837 2 0.020567624091972964 0.007515340948265956 0.05080205490803098 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 98866 20421 SGVEVLVSV True PC9_epitope_Rep5 887.4963979298699 887.4958449679301 83.584 1 0.020557756564694846 0.007515340948265956 0.05081168414699685 ['ENSG00000198695|ENST00000361681|MT-ND6'] 73752 7433 NADPQAVTM True NCI_RA007_Epitope_Rep4 945.42258136661 945.42148993586 35.235 2 0.020546815067514424 0.007515340948265956 0.05082236318888223 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 42133 11850 IDNNIEQISSY True NCI_RA007_Epitope_Rep3 1294.60411045554 1294.6030099358602 53.734 2 0.020541506212155346 0.007515340948265956 0.0508275453699304 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 108179 20719 SYGDILHVI True PC9_epitope_Rep5 1015.53384606775 1015.53274993586 84.753 2 0.020524162437112425 0.007515340948265956 0.05084447835754942 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 90698 4997 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 24.306 3 0.0205112826755413 0.007515340948265956 0.050857056085643525 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 17494 5430 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.53465490379 27.619 3 0.020506706264199044 0.007515340948265956 0.05086152579965629 ['ENSG00000162378|ENST00000294353|ZYG11B'] 69484 19028 LVAPPLPAA True PC9_epitope_Rep3 847.51673945163 847.51564993586 78.412 2 0.02050625280588761 0.007515340948265956 0.050861968703475625 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 1759 12515 AEGSEFWSA True H1975_Epitope_Rep3 982.4032258210199 982.40267496793 53.335 1 0.020501847595086286 0.007515340948265956 0.050866271546857224 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 31647 10395 GEFQSFSSA True NCI_RA007_Epitope_Rep2 958.4032258210199 958.40212993586 45.025 2 0.02050181822749223 0.007515340948265956 0.05086630023302473 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 23884 15112 EYIRSLNQF True PC9_epitope_Rep4 1168.58767254576 1168.58656993586 66.057 2 0.020501446614608534 0.007515340948265956 0.050866663224402815 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 28894 14723 FTDGDAALEF True H1975_Epitope_Rep1 1084.4713053808398 1084.4707749679299 61.852 1 0.0204960275495872 0.007515340948265956 0.050871956809663325 ['ENSG00000173545|ENST00000308683|ZNF622'] 6184 7973 APNLQNQQV True PC9_epitope_Rep6 1010.5145076055 1010.51340993586 40.128 2 0.02049413498640565 0.007515340948265956 0.05087380565760377 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 18835 15125 ELDPLTGEWHY True H1975_Epitope_Rep2 1358.61428121642 1358.6131899358602 63.335 2 0.020491039574199708 0.007515340948265956 0.05087682969061188 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 26803 21000 FLAEDALNTV True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 85.603 2 0.02045452101737184 0.007515340948265956 0.05091251738347953 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 38878 12956 HHEFLQQSL True PC9_epitope_Rep5 1137.55670677065 1137.55560993586 54.845 2 0.020441947133638103 0.007515340948265956 0.05092480998614591 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23', 'MED23|p.H779Pfs*26|1|0.22|ENSG00000112282|chr6:131598646-131598647|-/G|frameshift_variant'] 121252 4988 VETFGGLK True NCI_RA007_Epitope_Rep4 849.4596184983299 849.45852993586 25.663 2 0.020401508700496503 0.007529843893480257 0.05096436046774919 ['COL6A6|p.D2019Rfs*12|1|0.45|ENSG00000206384|chr3:130661854-130661855|-/C|frameshift_variant', 'ENSG00000206384|ENST00000358511|COL6A6', 'COL6A6|p.D1304Vfs*12|1|0.12|ENSG00000206384|chr3:130582008-130582009|-/TAGATCTCAAACTTGGGAGAAT|frameshift_variant', 'COL6A6|p.D1304Lfs*23|1|0.12|ENSG00000206384|chr3:130582007-130582008|-/CT|frameshift_variant', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6'] 139868 21918 YPPVQVLF True PC9_epitope_Rep2 961.5273041353298 961.52620993586 89.784 2 0.02036953642472957 0.007529843893480257 0.05099564869702623 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 138211 15117 YGSDIVPF True H1975_Epitope_Rep1 896.4279840168799 896.42743496793 63.404 1 0.020354626087163766 0.007529843893480257 0.05101024546582417 ['ENSG00000079246|ENST00000392132|XRCC5'] 35766 16580 GTIGLIHAI True PC9_epitope_Rep4 893.53345214493 893.53234993586 71.752 2 0.020352585966279837 0.007529843893480257 0.051012242951412726 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 42953 7123 IESPAVAA True H1975_Epitope_Rep2 756.40176926904 756.40122496793 32.331 1 0.02034998994456368 0.007529843893480257 0.05101478481403031 ['ENSG00000106211|ENST00000248553|HSPB1'] 71555 4930 MAQTDPETND True PC9_epitope_Rep5 1120.43426824912 1120.4331699358602 24.0 2 0.020313762413021717 0.007529843893480257 0.05105026749905483 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 106684 14437 STTNGGILTV True PC9_epitope_Rep6 961.50802524273 961.50692993586 67.423 2 0.020292038570323093 0.007529843893480257 0.051071554492853555 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 15047 2837 DYNVTANSK True NCI_RA007_Epitope_Rep1 1010.4668887067401 1010.46578993586 14.859 2 0.020286277989546533 0.007529843893480257 0.05107720046553448 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'LDHA|p.G80V|1|0.17|ENSG00000134333|chr11:18399543-18399543|G/T|missense_variant'] 84330 12011 PYTKVEESF True PC9_epitope_Rep3 1098.5233409536997 1098.5222499358601 51.226 2 0.020274943685510954 0.007529843893480257 0.05108831077949224 ['ENSG00000182858|ENST00000330817|ALG12'] 133870 16671 VYGPMKNYL True PC9_epitope_Rep5 1083.5423025764699 1083.54120993586 69.129 2 0.020267395643364928 0.007529843893480257 0.051095710765926304 ['ENSG00000166825|ENST00000300060|ANPEP'] 39639 19444 HLPEELAEL True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 79.605 2 0.02025058309420875 0.007529843893480257 0.05111219672434031 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 74760 15901 NHASLISAL True PC9_epitope_Rep5 924.50288029264 924.5023349679301 66.153 1 0.02023491292569069 0.007529843893480257 0.051127566457576816 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 42424 14851 IEDPLIVTP True H1975_Epitope_Rep3 995.55391280599 995.55280993586 62.507 2 0.02022274884620564 0.007529843893480257 0.051139499959312884 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 85856 12200 QHFDSVM[Oxidation]QL True PC9_epitope_Rep1 1119.5018946969099 1119.5007899358602 51.786 2 0.020216374570863824 0.007529843893480257 0.05114575432681628 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 85904 10302 QHFRNLEAL True PC9_epitope_Rep2 1126.5883412521 1126.58668490379 44.955 3 0.020209377729142844 0.007529843893480257 0.051152620278337696 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 96537 21629 SADTTILFV True PC9_epitope_Rep2 965.50696261357 965.50641496793 88.671 1 0.020178907309557265 0.007529843893480257 0.05118252958203089 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 64782 16740 LQAPELANV True PC9_epitope_Rep6 953.5181960036099 953.51708993586 76.88 2 0.02017836141320091 0.007529843893480257 0.05118306555759457 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 118668 9779 TYSTEPNNL True PC9_epitope_Rep4 1037.46655435357 1037.46544993586 45.255 2 0.02015883484262472 0.007529843893480257 0.05120224031883136 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 111228 5118 THITAQTAV True PC9_epitope_Rep4 940.4977949122 940.49668993586 26.343 2 0.020129672461590045 0.007529843893480257 0.05123088835088943 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 103665 6147 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 29.037 2 0.02012938088907532 0.007529843893480257 0.05123117484777461 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 133631 22526 VYAFSIENF True PC9_epitope_Rep1 1088.5178616504397 1088.51676993586 91.448 2 0.020108737090298576 0.007529843893480257 0.0512514626539286 ['nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS', 'ENST00000528557.5_1_1:26759436-26769365:+|nuORF'] 87419 16027 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.46262993586 66.46 2 0.02009532204132644 0.007529843893480257 0.05126464992982817 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 45291 19905 IPVYSPLSA True PC9_epitope_Rep5 945.5171333744499 945.51602993586 81.619 2 0.02009043827652249 0.007529843893480257 0.051269451470586556 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 1160 7706 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 34.624 1 0.02004557615601834 0.007529843893480257 0.05131357569304437 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 55307 8306 LAEAALELREE True NCI_RA007_Epitope_Rep2 1242.6455813446998 1242.64448993586 36.948 2 0.02004149422062607 0.007529843893480257 0.05131759204703553 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 134864 16312 VYVLTVTEL True NCI_RA007_Epitope_Rep4 1035.5852129342697 1035.5841099358602 70.742 2 0.02003839685738816 0.007529843893480257 0.05132063982078534 ['ENSG00000196368|ENST00000375992|NUDT11', 'ENSG00000122824|ENST00000356450|NUDT10'] 64816 5789 LQDAEIAR True PC9_epitope_Rep5 914.4821448480599 914.48104993586 27.26 2 0.020035941110008577 0.007529843893480257 0.05132305635751426 ['ENSG00000197956|ENST00000368719|S100A6'] 40579 9184 HRGTGLVL True PC9_epitope_Rep3 851.49773534255 851.49662993586 40.265 2 0.020030402415945267 0.007529843893480257 0.0513285069614122 ['ENSG00000099812|ENST00000215582|MISP'] 139014 7314 YKYKARIFL True NCI_RA007_Epitope_Rep3 1200.7019144523597 1200.70027490379 35.887 3 0.020029211177158352 0.007529843893480257 0.051329679316708066 ['ENSG00000090054|ENST00000262554|SPTLC1', 'SPTLC1|p.T463Pfs*5|1|0.09|ENSG00000090054|chr9:92032501-92032501|G/-|frameshift_variant'] 64904 13295 LQEDPPVGV True PC9_epitope_Rep4 952.4865615221598 952.48546993586 59.035 2 0.020019673973272933 0.007529843893480257 0.05133906613562898 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 54259 16793 KWNPTAGVAF True PC9_epitope_Rep4 1089.56072952193 1089.56017496793 72.565 1 0.020009790838144383 0.007529843893480257 0.051348794929166365 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 8786 14277 AVDPGLLGY True H1975_Epitope_Rep2 903.47018318203 903.46963496793 60.066 1 0.01998640796251313 0.007529843893480257 0.05137181871452368 ['ENSG00000111676|ENST00000396684|ATN1'] 138271 8428 YHADIYDKV True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 39.882 2 0.01998579697455456 0.007529843893480257 0.05137242043400764 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 85378 16261 QEVAVKEQLT True PC9_epitope_Rep5 1143.6135529404298 1143.61244993586 67.539 2 0.01997130261227977 0.007529843893480257 0.05138669663138762 ['ENSG00000197892|ENST00000524189|KIF13B'] 74925 14117 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69646993586 66.17 2 0.019969891841856473 0.007529843893480257 0.051388086342519894 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 130235 21249 VSFGDFVQV True PC9_epitope_Rep4 996.4916469025999 996.49054993586 89.898 2 0.019966651434971887 0.007529843893480257 0.05139127849589046 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 110596 8172 TFSVVPSPK True H1975_Epitope_Rep1 960.5280324113198 960.52692993586 36.374 2 0.019951816973734833 0.007529843893480257 0.05140589414831921 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 141670 21367 YTTDFIYQL True PC9_epitope_Rep4 1162.55464108198 1162.5540749679299 90.355 1 0.019926101157514236 0.007529843893480257 0.051431238800124505 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 48109 19392 IYNNIKNFVRF True PC9_epitope_Rep5 1426.7721192705 1426.77046490379 79.638 3 0.01991975906149079 0.007529843893480257 0.05143749094693247 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ENST00000510774.1_1_3:130699433-130714956:+|nuORF'] 746 15602 AAVNVICEL True H1975_Epitope_Rep2 930.48445334718 930.48390496793 65.169 1 0.01991162351401135 0.007529843893480257 0.051445512029092984 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 27734 13214 FPRPVTVEP True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 56.105 2 0.019897455536720808 0.007529843893480257 0.05145948313515125 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 292 16990 AAGTVFTTV True PC9_epitope_Rep3 865.4545331178899 865.4539849679301 70.512 1 0.019876000448685354 0.007529843893480257 0.051480646066457976 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 131757 20125 VTPPGFQLV True PC9_epitope_Rep4 956.53311779176 956.53202993586 85.546 2 0.01986881098724878 0.007529843893480257 0.05148773923759183 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 120187 9022 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48472993586 39.656 2 0.019849813604939898 0.007529843893480257 0.05150648607176893 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 7982 20051 ATDFGEALV True PC9_epitope_Rep1 921.4443623570098 921.44326993586 81.952 2 0.019844639992503646 0.007529843893480257 0.05151159242929428 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 2522 8620 AEQPSELVSA True H1975_Epitope_Rep1 1029.4978544818498 1029.4967499358602 38.084 2 0.019809301858496706 0.007529843893480257 0.05154648237529985 ['ENSG00000183155|ENST00000367262|RABIF'] 120397 8598 VEELGPPSA True H1975_Epitope_Rep2 897.4443623570099 897.44326993586 38.026 2 0.019778695255564787 0.007529843893480257 0.051576716584433885 ['ENSG00000112511|ENST00000374516|PHF1', 'ENST00000486845.1_1_6:33382534-33383872:+|nuORF', 'ENST00000374512.7_2_6:33381598-33383628:+|nuORF'] 115195 16407 TRDQFLDTL True PC9_epitope_Rep4 1107.5560380643099 1107.55547496793 71.071 1 0.019763125531744693 0.007529843893480257 0.05159210249394745 ['ENSG00000010292|ENST00000315579|NCAPD2'] 26639 19670 FIPPDGNFRL True PC9_epitope_Rep2 1174.61349337078 1174.6123899358602 81.047 2 0.019754283413332012 0.007529843893480257 0.051600841912224596 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 14911 17089 DYAYLREHF True PC9_epitope_Rep3 1212.5563724174797 1212.55471490379 70.883 3 0.019720349708865846 0.007552453973646757 0.051634392839919996 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 92992 9089 RPKPIITSV True PC9_epitope_Rep3 1009.62841515893 1009.62730993586 39.901 2 0.019718182056841647 0.007552453973646757 0.05163653665301258 ['ENSG00000168802|ENST00000448552|CHTF8'] 39371 7909 HKFSSAIGL True NCI_RA007_Epitope_Rep4 958.5236157372199 958.52250993586 37.16 2 0.01966199290212525 0.0075717596310488034 0.051692133534106226 ['ENSG00000141526|ENST00000582743|SLC16A3'] 109870 6708 TEETATTVVA True H1975_Epitope_Rep2 1020.4975201286799 1020.4969749679301 30.714 1 0.019654371228294686 0.0075717596310488034 0.05169967867843787 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 31089 22417 GAVDPLLAL True PC9_epitope_Rep1 867.50656869075 867.5060249679301 91.047 1 0.019631944813813106 0.0075717596310488034 0.051721885186719406 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 58488 7415 LEQDHFQVA True H1975_Epitope_Rep2 1085.5141732523298 1085.5130699358601 33.464 2 0.01963100966728492 0.0075717596310488034 0.05172281133463548 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 41062 6249 HTLNQIDSVK True PC9_epitope_Rep3 1153.6091362663299 1153.60802993586 29.074 2 0.01962709977104736 0.0075717596310488034 0.05172668375561505 ['CON__P12763'] 128819 11745 VQASHFEGL True PC9_epitope_Rep5 986.4821448480599 986.48104993586 50.177 2 0.019626738495374434 0.0075717596310488034 0.05172704158065089 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 38187 4484 HDPSAVAV True PC9_epitope_Rep6 794.3922672145001 794.39116993586 24.448 2 0.019610307536628322 0.0075717596310488034 0.0517433177647878 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 129410 16365 VRFGPGVAF True PC9_epitope_Rep6 948.5181364339599 948.51702993586 75.333 2 0.019609930005263374 0.0075717596310488034 0.05174369178964278 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 47530 17096 IVSNPVDILTY True H1975_Epitope_Rep3 1232.66525416012 1232.66414993586 71.378 2 0.019601594480611967 0.0075717596310488034 0.05175195046307077 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 96235 12082 RYQDAIRVF True PC9_epitope_Rep6 1166.6196413803798 1166.61854993586 57.796 2 0.01959990754938301 0.0075717596310488034 0.051753621973748234 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 107223 18265 SVISQSTLV True PC9_epitope_Rep4 932.51786165044 932.51676993586 78.326 2 0.019578394452625405 0.0075717596310488034 0.051774942326707894 ['ENST00000540013.5_1_11:94212913-94219150:-|nuORF'] 71782 4897 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 23.964 2 0.01955788560425863 0.0075717596310488034 0.05179527418361801 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 87937 6320 QRLETQVSA True PC9_epitope_Rep1 1030.5407223533398 1030.5396299358601 29.122 2 0.01955352661440021 0.0075717596310488034 0.05179959640512027 ['ENSG00000196878|ENST00000356082|LAMB3'] 23900 10472 EYKNTNEMF True PC9_epitope_Rep2 1174.49647458286 1174.49536993586 45.597 2 0.01953046477452359 0.0075717596310488034 0.05182246867490309 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 142764 18003 YYQSSVQYL True PC9_epitope_Rep2 1149.5342399905699 1149.5331499358601 74.551 2 0.01953043155346307 0.0075717596310488034 0.05182250162889984 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 39492 7705 HLDSDQKLLY True H1975_Epitope_Rep2 1230.6244519773002 1230.62334993586 34.591 2 0.01950376604986744 0.0075717596310488034 0.05184895835191084 ['ENSG00000197302|ENST00000316491|KRBOX5', 'ENST00000529943.6_1_16:31724760-31765604:+|nuORF', 'ENST00000534277.5_1_16:31724760-31767037:+|nuORF'] 49290 8176 KEQVPGFTP True H1975_Epitope_Rep2 1001.5181960036098 1001.51708993586 36.399 2 0.019496732800734905 0.0075717596310488034 0.05185593839230699 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 76334 18548 NPTLILAA True PC9_epitope_Rep4 811.4803539429099 811.47924993586 79.42 2 0.019484559193705925 0.0075717596310488034 0.05186802173627102 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 40584 8910 HRGTGLVL True PC9_epitope_Rep5 851.49773534255 851.49662993586 39.217 2 0.01945041462573883 0.0075717596310488034 0.05190192554183816 ['ENSG00000099812|ENST00000215582|MISP'] 72331 24475 MIPLLLAAL True PC9_epitope_Rep1 953.5983609006099 953.59781496793 98.988 1 0.019431848873629087 0.0075717596310488034 0.05192036806109403 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 2748 3959 AETKPPM[Oxidation]AP True H1975_Epitope_Rep3 956.4637182830398 956.46262993586 20.358 2 0.019423254342270425 0.0075717596310488034 0.05192890737710433 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 127845 21916 VPFLNPYTV True PC9_epitope_Rep1 1048.5593325395998 1048.55822993586 89.115 2 0.019403081431737034 0.007590176339746383 0.0519489552426711 ['ENST00000403017.2_1_2:135957914-136028945:-|nuORF', 'nc|ENSG00000121988|Q5FWF4-3|ZRANB3', 'ENSG00000121988|ENST00000264159|ZRANB3', 'nc|ENSG00000121988|Q5FWF4-4|ZRANB3', 'nc|ENSG00000121988|Q5FWF4-2|ZRANB3'] 139437 21227 YLPPGFLSA True PC9_epitope_Rep3 963.50656869075 963.50546993586 86.941 2 0.01940054076900059 0.007590176339746383 0.05195148060974263 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 141408 16247 YTELEAIMY True H1975_Epitope_Rep2 1131.5158130451098 1131.51527496793 67.702 1 0.019393978983980605 0.007590176339746383 0.0519580033594971 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 97458 11739 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 50.146 1 0.01937044022684684 0.007590176339746383 0.051981407650810864 ['ENSG00000135900|ENST00000258383|MRPL44'] 13935 10931 DRAGSIVL True PC9_epitope_Rep4 829.46576650793 829.46466993586 49.815 2 0.019308636605138912 0.007590176339746383 0.052042899644841954 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 31461 5133 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.3913849679301 24.822 1 0.01929009765161751 0.007590176339746383 0.05206135682335488 ['ENSG00000131116|ENST00000300811|ZNF428'] 12064 16036 DHTLGNII True PC9_epitope_Rep2 881.46068112749 881.45958993586 66.938 2 0.01928294209872371 0.007590176339746383 0.05206848225817306 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 33519 11805 GLDSGFHSV True PC9_epitope_Rep5 917.4242956187701 917.42318993586 50.404 2 0.019274314963427238 0.007590176339746383 0.052077074151624936 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF'] 75927 19931 NLSEGVLSV True PC9_epitope_Rep1 916.48656152216 916.48601496793 81.485 1 0.019273024814188182 0.007590176339746383 0.0520783591311754 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF'] 47422 22052 IVLPEDLQL True PC9_epitope_Rep2 1038.5961119711399 1038.59557496793 90.296 1 0.019258117733026686 0.007590176339746383 0.05209320837700228 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 26443 18464 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.4596499358602 76.228 2 0.01924922804931162 0.007590176339746383 0.05210206523428269 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 60288 4554 LGSALRPSTSR True NCI_RA007_Epitope_Rep2 1143.6360197205101 1143.63492993586 22.342 2 0.01922187254750144 0.007590176339746383 0.05212932751794972 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 87378 17368 QPTQVTLITA True PC9_epitope_Rep5 1070.5971746003 1070.5960699358602 71.806 2 0.019213059750687253 0.007590176339746383 0.05213811279034634 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 142909 21283 YYVGGEIVTI True PC9_epitope_Rep5 1112.57537652656 1112.5748749679299 86.918 1 0.019159967642825758 0.007590176339746383 0.052191064932317205 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 34092 19854 GLYEGLTWL True H1975_Epitope_Rep2 1050.53859709502 1050.53750993586 82.351 2 0.019141547300227522 0.007590176339746383 0.05220944707811212 ['ENSG00000165527|ENST00000298316|ARF6'] 37761 19579 GYADIVQLL True NCI_RA007_Epitope_Rep2 990.5385970950199 990.5380449679301 81.099 1 0.019136992951850333 0.007590176339746383 0.05221399280596562 ['ENSG00000134996|ENST00000346234|OSTF1'] 31574 10160 GEELAGAIAA True H1975_Epitope_Rep3 900.4552613938798 900.45471496793 44.123 1 0.019124549749778903 0.007590176339746383 0.05222641412010281 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 54209 18157 KVVNIVPVI True PC9_epitope_Rep4 979.6430025939098 979.64190993586 77.904 2 0.01908580474198464 0.007590176339746383 0.052265106587126055 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 138341 8006 YHEHQANLL True PC9_epitope_Rep5 1123.5410567065098 1123.53940490379 35.733 3 0.019076434848920982 0.007590176339746383 0.05227446732368979 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 117307 20209 TVMPEDLVEA True PC9_epitope_Rep1 1102.5216267015398 1102.5205299358602 82.563 2 0.01907335126775627 0.007590176339746383 0.052277548193906585 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118788237-118827866:+|nuORF'] 32160 8841 GEVLDPTAA True H1975_Epitope_Rep2 871.4287122928699 871.42760993586 38.973 2 0.019071571697332597 0.007590176339746383 0.05227932626796579 ['ENSG00000140688|ENST00000327237|RUSF1', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 90323 6059 REFDRRFSP True NCI_RA007_Epitope_Rep2 1208.6050539453997 1208.60341490379 28.173 3 0.019064507931692076 0.007590176339746383 0.052286384585952736 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 23190 12744 EVLLSLFDEK True NCI_RA007_Epitope_Rep1 1191.63870505911 1191.6376099358602 53.557 2 0.019031534292704707 0.007590176339746383 0.05231934319380009 ['ENSG00000151790|ENST00000536354|TDO2', 'ENST00000510293.1_1_4:156835507-156839956:+|nuORF', 'TDO2|p.R272G|1|0.28|ENSG00000151790|chr4:155914410-155914410|C/G|missense_variant'] 103847 8027 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 35.851 2 0.019011816144554685 0.007590176339746383 0.05233906053853514 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 58849 13905 LESTPSPVVF True H1975_Epitope_Rep1 1074.55972646242 1074.55917496793 58.637 1 0.01899096404247874 0.007590176339746383 0.05235991845714998 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 71993 5869 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 27.56 2 0.018982695597287276 0.007590176339746383 0.05236819110637484 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 128579 14980 VPTNIIAA True PC9_epitope_Rep1 797.4647038787699 797.4641549679301 62.441 1 0.018967667163727452 0.00761258369256168 0.052383229940694824 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 30250 20894 FYVPAEPKLAF True PC9_epitope_Rep3 1280.68051030144 1280.6794099358601 85.644 2 0.01896570680683152 0.00761258369256168 0.05238519191682704 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 41693 12639 IAHLEITAL True NCI_RA007_Epitope_Rep4 979.57023157647 979.56912993586 55.646 2 0.018960402585647858 0.00761258369256168 0.05239050082301402 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14', 'TTC14|p.P166S|1|0.11|ENSG00000163728|chr3:180604234-180604234|C/T|missense_variant'] 39146 7414 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.54013490379 33.895 3 0.018938409164647476 0.0076290407569474675 0.0524125184032265 ['ENSG00000156482|ENST00000287038|RPL30'] 87431 15925 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.4631649679301 66.247 1 0.018933395837238652 0.0076290407569474675 0.052417538305201 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 29147 20153 FTPDVKVWEV True PC9_epitope_Rep2 1218.62847472858 1218.62736993586 82.931 2 0.01892677934352924 0.0076290407569474675 0.05242416408268541 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 29129 19640 FTLSHITQL True PC9_epitope_Rep3 1058.5760452329 1058.57494993586 80.782 2 0.018910804728597592 0.0076290407569474675 0.05244016395806177 ['ENSG00000148484|ENST00000345264|RSU1'] 61263 21016 LIPDIDLKL True PC9_epitope_Rep5 1038.63249747986 1038.6314099358601 85.896 2 0.018901100861372103 0.0076290407569474675 0.0524498851351956 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 128399 5490 VPRPETAVA True PC9_epitope_Rep4 938.5185303567798 938.51742993586 27.877 2 0.018893487870315053 0.0076290407569474675 0.05245751274631252 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 117054 23708 TVIDQIPFLAV True PC9_epitope_Rep5 1214.6910749851402 1214.68996993586 96.173 2 0.018881340081497562 0.0076290407569474675 0.05246968575752506 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 40395 4458 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 23.792 2 0.018873529772904588 0.0076290407569474675 0.052477513512402055 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 70850 19936 LYDIVFKHF True PC9_epitope_Rep1 1180.6280808057602 1180.62643490379 81.504 3 0.018868243303407955 0.0076290407569474675 0.052482812336820235 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 36908 18431 GVLPNIQAV True PC9_epitope_Rep6 909.5283667644899 909.52781496793 83.538 1 0.01886554376963918 0.0076290407569474675 0.05248551834972867 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 86293 16864 QISDTSVVL True PC9_epitope_Rep4 960.51277627 960.51222496793 72.848 1 0.018847433892599144 0.0076290407569474675 0.05250367466596456 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 34884 18251 GQLPNLQTV True PC9_epitope_Rep5 968.5290950404801 968.5285449679301 75.218 1 0.01884720035110106 0.0076290407569474675 0.05250390884014032 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 90104 6311 REAPPVVPP True H1975_Epitope_Rep2 960.5392658013599 960.53816993586 29.211 2 0.018843032403487215 0.0076290407569474675 0.05250808822374999 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 32594 12313 GGHGPSFPL True PC9_epitope_Rep4 867.42390169595 867.42280993586 55.174 2 0.01883832158673209 0.0076290407569474675 0.05251281229612609 ['ENSG00000079246|ENST00000392132|XRCC5'] 45527 10320 IQQGETPGL True PC9_epitope_Rep4 941.4818104948898 941.48070993586 47.387 2 0.01883489996836495 0.0076290407569474675 0.05251624376209779 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143', 'ENST00000532305.1_1_11:9546777-9549157:+|nuORF'] 111005 6132 THAVVGVAT True PC9_epitope_Rep5 853.4657665079299 853.46466993586 28.572 2 0.018822260238496213 0.0076290407569474675 0.05252892147217915 ['ENSG00000111671|ENST00000524270|SPSB2', 'nc|ENSG00000111671|Q99619-2|SPSB2', 'SPSB1|p.D184Gfs*38|1|0.12|ENSG00000171621|chr1:9356439-9356440|-/G|frameshift_variant', 'ENSG00000175093|ENST00000310546|SPSB4', 'ENSG00000171621|ENST00000328089|SPSB1'] 57497 6089 LEDKPPAPP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 28.434 2 0.018817770920618898 0.0076290407569474675 0.05253342488668137 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 38308 11920 HEFPMNFNP True NCI_RA007_Epitope_Rep4 1131.4807649490701 1131.47966993586 52.852 2 0.018816589637732955 0.0076290407569474675 0.052534609931718206 ['ENSG00000085719|ENST00000517490|CPNE3', 'ENST00000523588.1_1_8:87563280-87563554:+|nuORF'] 89649 9429 QYTQALEKF True NCI_RA007_Epitope_Rep4 1126.5658744720197 1126.56476993586 43.127 2 0.01879634880169136 0.0076290407569474675 0.05255491865392676 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant', 'ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion'] 87424 16003 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.46262993586 66.698 2 0.018795885859111565 0.0076290407569474675 0.052555383224852106 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 44420 20071 ILGPPPPSF True PC9_epitope_Rep3 923.51165407119 923.51054993586 82.454 2 0.018776749833255522 0.0076290407569474675 0.05257458952083376 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF', 'ENST00000511978.5_1_5:138651425-138655027:+|nuORF', 'ENST00000509918.5_1_5:138651425-138657594:+|nuORF'] 117035 8418 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.56438993586 37.321 2 0.018767564366460106 0.0076290407569474675 0.052583810772268993 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 78378 11613 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.6069699358602 55.793 2 0.01874209539848227 0.0076290407569474675 0.052609385933006445 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 109727 3739 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 19.378 2 0.01874124987273578 0.0076290407569474675 0.05261023515991971 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 2118 13266 AELLATLQA True H1975_Epitope_Rep2 928.5229470308799 928.52184993586 56.158 2 0.018740591850241996 0.0076290407569474675 0.05261089607062762 ['ENSG00000148798|ENST00000369849|INA'] 53077 5214 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 25.137 2 0.01871841777688834 0.0076290407569474675 0.05263317147092217 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 119615 7184 VATVSLPR True NCI_RA007_Epitope_Rep4 841.5021520166499 841.50104993586 34.255 2 0.01870741395125082 0.0076290407569474675 0.05264422846435845 ['CON__P00761'] 98865 19542 SGVEVLVSV True PC9_epitope_Rep4 887.4963979298699 887.4958449679301 83.291 1 0.018676733025248485 0.0076290407569474675 0.052675067740054156 ['ENSG00000198695|ENST00000361681|MT-ND6'] 48152 12541 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 53.109 3 0.01866478216868417 0.0076290407569474675 0.05268708430408192 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 17262 15747 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50708496793 65.396 1 0.01866417130103023 0.0076290407569474675 0.05268769859103059 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 45777 13508 ISARTTSII True PC9_epitope_Rep2 960.56039516876 960.55928993586 57.246 2 0.01865704623748049 0.0076290407569474675 0.0526948639724372 ['ENSG00000215182|ENST00000621226|MUC5AC'] 56546 23205 LDGLYLLTL True PC9_epitope_Rep5 1019.5902983147099 1019.5897749679301 94.239 1 0.018649853823569068 0.0076290407569474675 0.052702097899441205 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 2751 5203 AETKPPMAP True H1975_Epitope_Rep2 940.4688032830398 940.46770993586 25.085 2 0.018640842933695886 0.0076290407569474675 0.052711161952658785 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 25788 6823 FEVTKTAVA True H1975_Epitope_Rep2 964.5229470308799 964.52184993586 31.163 2 0.01863876512100339 0.0076290407569474675 0.052713252206414506 ['ENSG00000074842|ENST00000262947|MYDGF'] 120587 9670 VEHDFIMAT True H1975_Epitope_Rep3 1061.4851816231699 1061.48408993586 42.215 2 0.01863785096620262 0.0076290407569474675 0.05271417185641459 ['ENSG00000164163|ENST00000296577|ABCE1', 'ENST00000510321.1_1_4:146044588-146044753:+|nuORF', 'ENST00000515678.5_1_4:146042303-146044753:+|nuORF', 'ENST00000444025.1_1_7:23602199-23602811:-|nuORF'] 142649 13007 YYPAKIEAI True PC9_epitope_Rep6 1066.5698972233 1066.5688099358601 61.613 2 0.018620653709726893 0.0076290407569474675 0.052731474952624285 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 121815 15278 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 66.695 2 0.01861548515206368 0.0076290407569474675 0.05273667623412884 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 103825 17514 SPYHGFTIV True PC9_epitope_Rep1 1019.5076313199099 1019.50652993586 72.161 2 0.018608011045090238 0.0076510743574471985 0.052744198409477895 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 54856 21952 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61157496793 89.257 1 0.018606510001967506 0.0076510743574471985 0.052745709212845 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 46992 7924 ITQIEHEVSSS True PC9_epitope_Rep3 1228.5935457718401 1228.59244993586 35.459 2 0.01860497397196919 0.0076510743574471985 0.052747255267481745 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 63438 6808 LLVSASQDGK True PC9_epitope_Rep1 1016.5502244078799 1016.54912993586 30.992 2 0.018572478559473627 0.0076510743574471985 0.05277997150367342 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 114795 19098 TQLGPPYHIL True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 78.684 2 0.018566591901029255 0.0076510743574471985 0.05278589995263665 ['ENSG00000119616|ENST00000341162|FCF1'] 109101 16302 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.57388993586 70.666 2 0.018558838953677863 0.007669413919413919 0.05279370877638198 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 118102 21636 TYGPSFPAF True PC9_epitope_Rep1 985.4545331178899 985.4539849679301 88.049 1 0.018545367562711395 0.007669413919413919 0.052807279519793096 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 71990 5399 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 25.8 2 0.01853595127618899 0.007669413919413919 0.05281676695767966 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 116237 4879 TTDENKVPY True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 23.853 2 0.018524794515247876 0.007669413919413919 0.052828009838036726 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 138391 17202 YHGLTVPL True PC9_epitope_Rep5 898.4912529797799 898.49014993586 71.187 2 0.018504085922456764 0.007669413919413919 0.05284888350470061 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 5237 15911 ALPGLLHA True PC9_epitope_Rep3 790.47012361238 790.46902993586 66.35 2 0.018488822618003865 0.007669413919413919 0.052864272823951265 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 89631 17634 QYSPLLAAF True NCI_RA007_Epitope_Rep4 1008.5280324113198 1008.52692993586 76.298 2 0.018486100731500362 0.007669413919413919 0.052867017570131014 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 64358 22980 LPLLIAPALAA True PC9_epitope_Rep2 1061.68486740589 1061.68376993586 93.888 2 0.018479448405597055 0.007669413919413919 0.052873726259180374 ['ENSG00000168140|ENST00000304735|VASN'] 42856 14917 IEQPTPFLP True H1975_Epitope_Rep3 1040.5542471591598 1040.5531499358601 62.764 2 0.018478791915768646 0.007669413919413919 0.05287438834924411 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 80383 7204 PGHLQEGFG True PC9_epitope_Rep4 940.4402800360799 940.43918993586 35.014 2 0.01847113431815566 0.007669413919413919 0.052882111774741704 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 111306 17028 THMSPSWTL True PC9_epitope_Rep5 1058.4855159763401 1058.4844099358602 70.516 2 0.01844467722944871 0.007669413919413919 0.052908803447925416 ['nc|ENSG00000128513|Q9NUX5-2|POT1', 'ENSG00000128513|ENST00000357628|POT1'] 104807 10880 SQYPVNHLV True PC9_epitope_Rep4 1055.53999407735 1055.5388899358602 49.615 2 0.018435591563547696 0.007669413919413919 0.0529179722307437 ['ENSG00000131037|ENST00000201647|EPS8L1'] 76792 14547 NRAINIAL True PC9_epitope_Rep5 883.5239500903899 883.52284993586 60.955 2 0.01843422229579557 0.007669413919413919 0.05291935413815211 ['ENSG00000172336|ENST00000303151|POP7'] 52879 9401 KPFGQVIST True PC9_epitope_Rep6 975.5389314481899 975.53782993586 46.368 2 0.018427333099449855 0.007669413919413919 0.05292630737913133 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 52864 17921 KPFELGNFAA True PC9_epitope_Rep4 1092.56039516876 1092.55928993586 76.982 2 0.018393068985534403 0.007669413919413919 0.05296090119812078 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 6573 19477 APVETLENIIA True PC9_epitope_Rep6 1168.63395403184 1168.6328499358601 87.581 2 0.01838857071876315 0.007669413919413919 0.05296544413102858 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 75092 16734 NHVSSPFEL True PC9_epitope_Rep3 1028.4927095317598 1028.4916099358602 69.506 2 0.018380171010470337 0.007669413919413919 0.052973928103997404 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 64860 15766 LQDQNTYTL True PC9_epitope_Rep2 1094.52440358286 1094.5233099358602 65.909 2 0.01837678516437966 0.007669413919413919 0.05297734823269473 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 38987 16460 HHLPMPVAI True PC9_epitope_Rep5 1013.54805666325 1013.54694993586 68.311 2 0.01836052287709486 0.007669413919413919 0.052993777712809394 ['ENSG00000261150|ENST00000615648|EPPK1'] 24424 18597 FADGFVLVY True H1975_Epitope_Rep3 1029.51713337445 1029.51657496793 77.993 1 0.018353163868812885 0.007669413919413919 0.05300121375718239 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 81781 18409 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 75.601 2 0.01833580196481876 0.007669413919413919 0.05301876081316666 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 12062 16613 DHTLGNII True PC9_epitope_Rep1 881.46068112749 881.45958993586 68.728 2 0.01832958575609063 0.007669413919413919 0.05302504447535363 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 89392 21592 QYAIISEAW True PC9_epitope_Rep5 1079.52876068731 1079.52766993586 88.095 2 0.01832089054997271 0.007669413919413919 0.05303383506325709 ['ENSG00000165475|ENST00000298248|CRYL1', 'nc|ENSG00000165475|Q9Y2S2-2|CRYL1'] 131151 6106 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 28.464 2 0.018301924256307937 0.007669413919413919 0.05305301356783044 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 85254 6902 QEQGDAPAI True H1975_Epitope_Rep3 927.4297749220298 927.42922496793 31.509 1 0.01827524836057211 0.007669413919413919 0.05307999759367513 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 27901 21509 FQDSVFNDL True PC9_epitope_Rep3 1083.48728979815 1083.48618993586 88.028 2 0.01827283185959429 0.007669413919413919 0.05308244256509029 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 30663 7250 GALALEEK True PC9_epitope_Rep1 829.4545331178899 829.45342993586 32.701 2 0.01824913581956778 0.007692131590393993 0.05310642269383601 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 26643 18949 FIPPDGNFRL True PC9_epitope_Rep4 1174.61349337078 1174.6123899358602 80.975 2 0.01823149070696529 0.007710788239331884 0.05312428514014986 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 90103 6211 REAPPVVPP True H1975_Epitope_Rep2 960.5392658013599 960.53816993586 28.86 2 0.018230789715756274 0.007710788239331884 0.05312499486749075 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 103585 12616 SPSPPSVAV True PC9_epitope_Rep5 839.4388830537499 839.43778993586 53.53 2 0.01822633316302037 0.007710788239331884 0.05312950714263373 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 103257 10125 SPLKHFVTA True PC9_epitope_Rep1 998.5549158654999 998.55380993586 43.819 2 0.018209366559076005 0.007710788239331884 0.05314668877331195 ['ENSG00000116688|ENST00000235329|MFN2', 'ENST00000497302.1_1_1:12042112-12052340:+|nuORF'] 62605 18914 LLLAQLSDA True PC9_epitope_Rep6 942.53859709502 942.53750993586 85.397 2 0.018204008475878268 0.007710788239331884 0.05315211571189472 ['ENSG00000175348|ENST00000534025|TMEM9B'] 46318 13279 ISQKCQVLD True PC9_epitope_Rep2 1032.5273807883198 1032.5262899358602 56.354 2 0.018167768537583454 0.007710788239331884 0.05318883332985308 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 121721 15153 VFLKAGASF True PC9_epitope_Rep2 938.5225531080598 938.52144993586 63.543 2 0.018165679393135545 0.007710788239331884 0.05319095064723647 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 140767 7583 YSDGKLQTV True PC9_epitope_Rep1 1009.5080252427299 1009.50692993586 33.987 2 0.01814227860592008 0.007710788239331884 0.053214671740764954 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 117189 8870 TVLERVEGA True PC9_epitope_Rep6 972.5240096600398 972.52290993586 44.055 2 0.01813909669128246 0.007710788239331884 0.053217897880805165 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 104062 16249 SQDPTMIGV True PC9_epitope_Rep2 946.44298245802 946.44188993586 67.745 2 0.01811055094729358 0.007710788239331884 0.05324684757696965 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 105020 19800 SRDLSLLI True PC9_epitope_Rep3 915.5389314481899 915.53782993586 81.393 2 0.018108579872433507 0.007710788239331884 0.053248847022514416 ['ENSG00000242550|ENST00000238508|SERPINB10'] 23632 17938 EWSPYTKIFQF True NCI_RA007_Epitope_Rep1 1444.7027022979998 1444.70160993586 73.911 2 0.018105205238362874 0.007710788239331884 0.053252270372757204 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 110982 6082 THAPATLEA True PC9_epitope_Rep3 909.45559574705 909.45448993586 28.444 2 0.018093552904161845 0.007710788239331884 0.05326409231131245 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 85855 17471 QHFDPVIQL True PC9_epitope_Rep6 1095.5712942056298 1095.57018993586 79.825 2 0.018061274007693938 0.007710788239331884 0.05329685231002295 ['ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 108062 10229 SYAMANTGI True NCI_RA007_Epitope_Rep5 926.41676771018 926.41566993586 45.977 2 0.01801730478209808 0.007710788239331884 0.053341503528867414 ['ENSG00000134294|ENST00000256689|SLC38A2', 'ENSG00000139209|ENST00000266579|SLC38A4'] 107295 23868 SVLDLVVAL True PC9_epitope_Rep2 927.56408356687 927.5635349679301 97.281 1 0.01799359541909538 0.007710788239331884 0.05336559340069965 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 106433 5683 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 29.335 3 0.017991351936755957 0.007710788239331884 0.05336787335153814 ['ENSG00000058729|ENST00000283109|RIOK2'] 111054 14326 THDGSILIV True PC9_epitope_Rep4 953.51819600361 953.5176449679301 63.007 1 0.017978243356734987 0.007710788239331884 0.05338119661643043 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 110364 7650 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 34.379 1 0.017932426241947838 0.007710788239331884 0.05342778557824285 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 77286 17038 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 71.133 2 0.01792361657307986 0.007710788239331884 0.05343674748677636 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 115812 4953 TSDQLHILK True NCI_RA007_Epitope_Rep4 1053.58185888933 1053.5807699358602 25.517 2 0.01791907355289867 0.007710788239331884 0.05344136949760058 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 26392 14124 FHWSGNEQM True PC9_epitope_Rep3 1134.45527847722 1134.45418993586 59.414 2 0.017910910991061187 0.007710788239331884 0.053449674809486994 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B'] 91082 17442 RFMDGHITF True PC9_epitope_Rep1 1122.5280494946599 1122.52639490379 71.888 3 0.017899533471563384 0.007710788239331884 0.05346125307320842 ['ENSG00000078081|ENST00000265598|LAMP3'] 2701 6465 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43324496793 29.785 1 0.01789474640092879 0.007710788239331884 0.05346612522264308 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 84254 22781 PYNDYFEYF True PC9_epitope_Rep3 1256.50260550912 1256.50207496793 92.896 1 0.017878960784383127 0.0077326073528402465 0.05348219397661264 ['ENSG00000116478|ENST00000373548|HDAC1', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2'] 64675 20629 LPVLIPVAS True PC9_epitope_Rep4 907.5742543277499 907.57314993586 87.505 2 0.017871216743565246 0.0077326073528402465 0.053490078368670035 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 71693 11573 MEDLGGSLPA True H1975_Epitope_Rep2 988.4535471417199 988.4529949679301 49.579 1 0.017864585671163096 0.0077326073528402465 0.0534968303801983 ['ENST00000540056.5_1_12:16500716-16500800:+|nuORF'] 72330 24474 MIPLLLAAL True PC9_epitope_Rep1 953.5983609006099 953.59726993586 98.984 2 0.017844823393276418 0.0077326073528402465 0.05351695724135084 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 32418 18017 GFSLEELR True PC9_epitope_Rep3 949.4868958753299 949.48578993586 74.505 2 0.017843125363346733 0.0077326073528402465 0.05351868688752641 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 72985 18090 MQMSPALTC True PC9_epitope_Rep3 980.4129452830399 980.41184993586 74.78 2 0.01782353422328609 0.0077326073528402465 0.053538646124590555 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 114264 9757 TPNRATFVV True PC9_epitope_Rep6 1003.5450794577899 1003.5439899358599 47.959 2 0.01780886017252224 0.007751583472435004 0.05355359989107651 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 69657 6823 LVDSNNPKI True PC9_epitope_Rep2 998.53965972418 998.53856993586 31.65 2 0.0177921905280144 0.007751583472435004 0.053570591454269935 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 96264 17018 RYQQWMERF True PC9_epitope_Rep1 1342.6240751378198 1342.62296993586 70.283 2 0.017785921545040023 0.007751583472435004 0.05357698264769843 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 439 19019 AALPNVYEV True PC9_epitope_Rep4 974.5072969667399 974.5067449679301 81.247 1 0.017772759131886293 0.007751583472435004 0.05359040369336296 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 75593 10255 NLDPAVHEV True PC9_epitope_Rep1 992.49270953176 992.49160993586 44.329 2 0.017769905718475917 0.007751583472435004 0.05359331353864983 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'ENST00000503738.5_1_2:27851561-27855513:+|nuORF', 'ENST00000461249.1_1_2:27852141-27855513:+|nuORF', 'ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 117188 8792 TVLERVEGA True PC9_epitope_Rep6 972.5240096600398 972.52290993586 43.719 2 0.017766754999598223 0.007751583472435004 0.05359652671998859 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 49027 4608 KEFPSQASP True NCI_RA007_Epitope_Rep3 989.4818104948898 989.48070993586 25.041 2 0.0177642499451218 0.007751583472435004 0.053599081549670836 ['ENSG00000138641|ENST00000402738|HERC3', 'ENST00000506714.5_1_4:89300148-89319290:+|nuORF', 'nc|ENSG00000138642|Q8IVU3-3|HERC6', 'nc|ENSG00000287542|Q15034-2|HERC3', 'nc|ENSG00000138642|Q8IVU3-2|HERC6', 'ENSG00000138642|ENST00000264346|HERC6'] 99328 11892 SHSPPLLQV True PC9_epitope_Rep6 976.53418042092 976.53308993586 56.974 2 0.017762779385795326 0.007751583472435004 0.053600581375479496 ['ENSG00000165030|ENST00000297689|NFIL3'] 24715 5432 FANGRSTGL True PC9_epitope_Rep2 921.46682913709 921.4657299358599 26.286 2 0.01775506324873653 0.007751583472435004 0.053608451641054905 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 9491 12418 AVVPSTATV True PC9_epitope_Rep5 843.4701831820299 843.46963496793 52.766 1 0.01774578655462301 0.007751583472435004 0.053617914892185335 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 114475 22380 TPYGYFLISA True PC9_epitope_Rep3 1130.5648118428599 1130.56370993586 91.362 2 0.01774379192760394 0.007751583472435004 0.05361994981096512 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 12063 15950 DHTLGNII True PC9_epitope_Rep2 881.46068112749 881.45958993586 66.599 2 0.01773122934062361 0.007751583472435004 0.053632767622087574 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 48349 17832 IYSTAFDYF True NCI_RA007_Epitope_Rep5 1125.5018772331298 1125.50137496793 75.39 1 0.01772864266829781 0.007751583472435004 0.05363540715822683 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'nc|ENSG00000290425|Q8N8J0|PI4KAP1', 'ENST00000450651.5_1_22:21841260-21846319:-|nuORF'] 129373 16001 VRDPRVLIL True PC9_epitope_Rep5 1079.68151336095 1079.68040993586 66.538 2 0.01770817334531327 0.007751583472435004 0.05365629857596361 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.E632G|1|0.23|ENSG00000204267|chr6:32829437-32829437|T/C|missense_variant'] 6404 6635 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 30.931 2 0.01768517540322979 0.007751583472435004 0.05367977872747645 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 127696 8984 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 44.579 2 0.01767956337207309 0.007751583472435004 0.05368550970959551 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 7933 5424 ATAPPGVLK True NCI_RA007_Epitope_Rep4 852.50690304392 852.50580993586 27.438 2 0.017660684334869642 0.007751583472435004 0.053704792589848525 ['ENSG00000105538|ENST00000222145|RASIP1'] 31514 12698 GEDFAIVA True H1975_Epitope_Rep2 820.3966838885999 820.39613496793 53.943 1 0.01765701604678934 0.007751583472435004 0.05370854000645713 ['ENSG00000008018|ENST00000262193|PSMB1'] 24086 19137 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5802749679299 78.403 1 0.01763806332920698 0.007751583472435004 0.05372790497342283 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 114373 20261 TPSIPVLTA True PC9_epitope_Rep5 897.51713337445 897.51602993586 82.983 2 0.017633016826733874 0.007751583472435004 0.05373306221117422 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 102991 16962 SPFGTITSA True PC9_epitope_Rep1 879.43379767331 879.43270993586 70.067 2 0.017625590700174696 0.007751583472435004 0.053740652028232125 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 128353 7731 VPQQALVIR True H1975_Epitope_Rep3 1022.6236641316598 1022.62256993586 34.72 2 0.017589430907867434 0.007751583472435004 0.05377762145298025 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4'] 121434 14097 VEWDYKLVP True NCI_RA007_Epitope_Rep4 1147.5913609438699 1147.59026993586 61.505 2 0.017570620218688025 0.007773560748090905 0.05379686157608842 ['ENSG00000162654|ENST00000355754|GBP4'] 72959 22909 MQDPMEIFV True PC9_epitope_Rep3 1108.49330377872 1108.49220993586 93.386 2 0.01756796996827492 0.007773560748090905 0.05379957278387326 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF'] 98208 6959 SETKIFTA True NCI_RA007_Epitope_Rep4 895.4650978015899 895.46400993586 33.394 2 0.01756480327744743 0.007773560748090905 0.05380281245760807 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 55294 8498 LADVNNIGKY True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 37.673 2 0.01753224853966697 0.007773560748090905 0.05383612677345511 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 11779 18238 DHDLQAIL True PC9_epitope_Rep1 923.47124581119 923.47014993586 74.944 2 0.017526293964152534 0.007773560748090905 0.053842222114636525 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000477802.1_1_1:182828020-182829385:+|nuORF'] 104839 4490 SRAPDGAAL True PC9_epitope_Rep4 856.4402800360799 856.43918993586 23.741 2 0.017480176500909005 0.007792860734037205 0.05388944897640441 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 138486 5634 YHSEGETL True PC9_epitope_Rep3 934.40322582102 934.40212993586 26.748 2 0.01747380663329436 0.007792860734037205 0.05389597474868134 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF'] 39964 11123 HPLLGVSA True PC9_epitope_Rep1 792.4493881678001 792.4488349679301 47.67 1 0.017467861874057706 0.007792860734037205 0.05390206559298589 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 64820 7078 LQDAIREV True NCI_RA007_Epitope_Rep2 942.51344497634 942.51234993586 32.156 2 0.017465072399258343 0.007792860734037205 0.05390492381038687 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2'] 127557 8439 VNSATGVPTV True H1975_Epitope_Rep1 943.49746055903 943.49691496793 37.387 1 0.01746190275752996 0.007792860734037205 0.05390817171435296 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 112711 20087 TLGPVPEI True PC9_epitope_Rep5 824.4643695256 824.46382496793 82.314 1 0.017448284345909653 0.007792860734037205 0.05392212820826026 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 69490 17046 LVAPPLPAA True PC9_epitope_Rep6 847.51673945163 847.51564993586 78.125 2 0.01744715261053009 0.007792860734037205 0.05392328817284338 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 35138 17728 GQWIAETGV True PC9_epitope_Rep4 959.4712458111899 959.47014993586 76.215 2 0.01744265928108927 0.007792860734037205 0.05392789378275441 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 89068 13391 QVMQGMGVSA True PC9_epitope_Rep2 1006.4575869763398 1006.45648993586 56.789 2 0.017421492751580725 0.007792860734037205 0.053949593569100174 ['ENSG00000169813|ENST00000682386|HNRNPF'] 85446 8110 QEYSEFVKA True NCI_RA007_Epitope_Rep3 1099.5185899264297 1099.51748993586 39.005 2 0.017413467032888253 0.007792860734037205 0.053957823356188914 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 45980 11798 ISESSSIY True H1975_Epitope_Rep2 884.41272787556 884.41217496793 50.456 1 0.017402214366727745 0.007792860734037205 0.0539693638764171 ['ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 38352 9365 HEIESLYTKL True NCI_RA007_Epitope_Rep5 1231.6448530687098 1231.6437499358601 42.664 2 0.017400982372988403 0.007792860734037205 0.05397062750874778 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 9705 17009 AYGHFSYEF True PC9_epitope_Rep4 1119.46616043075 1119.4650699358601 73.418 2 0.017385697337398982 0.007792860734037205 0.053986307095471864 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 133860 20485 VYGPLPQSF True PC9_epitope_Rep3 1006.5123823471798 1006.51187496793 84.054 1 0.01738171680014763 0.007792860734037205 0.05399039099529924 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 34819 19383 GQIEVVPEV True PC9_epitope_Rep3 968.5178616504398 968.51731496793 79.78 1 0.017380675265675653 0.007792860734037205 0.05399145961712589 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 87238 19314 QPLIGAIAA True PC9_epitope_Rep3 852.5069030439199 852.50580993586 79.513 2 0.017380667661423956 0.007792860734037205 0.05399146741920637 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 2539 15699 AEQPWPPLP True H1975_Epitope_Rep2 1033.5232813840498 1033.52218993586 65.554 2 0.017358699287747276 0.007792860734037205 0.054014011174141126 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 2637 7074 AESGQPVVP True H1975_Epitope_Rep2 882.4446967101799 882.44414496793 32.139 1 0.01735280463189483 0.007792860734037205 0.05402006153289865 ['ENSG00000133393|ENST00000255759|CEP20'] 105080 11768 SRDSSILIA True PC9_epitope_Rep1 960.52400966004 960.52290993586 50.138 2 0.017346400345567854 0.007792860734037205 0.054026635613827034 ['ENST00000327320.8_2_11:85989390-85989564:+|nuORF', 'ENST00000528250.1_1_11:85988947-85989564:+|nuORF', 'ENSG00000074266|ENST00000263360|EED', 'nc|ENSG00000074266|O75530-2|EED'] 87840 14999 QRGPPIIL True PC9_epitope_Rep1 892.5494365622399 892.54832993586 62.514 2 0.017331284021961713 0.007792860734037205 0.05404215531420209 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 76626 19566 NQQLPIESQMV True PC9_epitope_Rep2 1285.63363676201 1285.63252993586 80.642 2 0.017296845293799556 0.007809288943690916 0.0540775266922068 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 136903 13883 YAFGGGCEL True H1975_Epitope_Rep2 915.3796539254699 915.3791049679301 58.544 1 0.017287177153383505 0.007809288943690916 0.05408746007289714 ['ENSG00000127884|ENST00000368547|ECHS1'] 134645 20339 VYSQFITQL True PC9_epitope_Rep4 1097.5757108797297 1097.57517496793 86.378 1 0.017279475834552402 0.007809288943690916 0.05409537374417511 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 28812 15130 FSVTGRVL True PC9_epitope_Rep1 877.50215201665 877.50104993586 63.018 2 0.017255677145118636 0.007809288943690916 0.05411983464929281 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 2538 15550 AEQPWPPLP True H1975_Epitope_Rep2 1033.5232813840498 1033.52218993586 64.969 2 0.017237853398435574 0.007809288943690916 0.05413816029518403 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 115216 18394 TRDSTFVFM True PC9_epitope_Rep4 1102.5117307241799 1102.5106299358602 78.817 2 0.017234770476788137 0.007809288943690916 0.05414133054506921 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 18104 14885 EIIDLVLDR True NCI_RA007_Epitope_Rep4 1084.61282466444 1084.61172993586 64.718 2 0.017234303535399866 0.007809288943690916 0.054141810726527045 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 139633 21834 YMHGFFMDI True PC9_epitope_Rep1 1159.48307344819 1159.4819699358602 88.794 2 0.017211716992759134 0.007809288943690916 0.054165041878719164 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 27126 19199 FLIQHLPLV True PC9_epitope_Rep6 1078.65390163078 1078.6528099358602 86.502 2 0.01721007747553381 0.007809288943690916 0.05416672850518037 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 53987 10243 KVDSNGVITV True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 44.734 2 0.017206166667595873 0.007809288943690916 0.054170751858609756 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 24779 12701 FASTILHL True H1975_Epitope_Rep3 900.5069030439199 900.50580993586 54.065 2 0.01718508639299142 0.007809288943690916 0.0541924430035108 ['ENSG00000129562|ENST00000250498|DAD1'] 23302 15907 EVQILGDQY True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 66.387 2 0.01716409437822798 0.007809288943690916 0.0542140504077741 ['ENSG00000173599|ENST00000393960|PC', 'nc|ENSG00000173599|P11498-2|PC', 'PC|p.L883Sfs*26|1|0.04|ENSG00000173599|chr11:66850292-66850293|-/TT|frameshift_variant', 'PC|p.G882Efs*30|1|0.04|ENSG00000173599|chr11:66850293-66850294|-/AGACAAGTTCT|frameshift_variant', 'PC|p.M1012Cfs*22|1|0.07|ENSG00000173599|chr11:66849724-66849724|T/-|frameshift_variant'] 27002 17504 FLEPVNPRL True PC9_epitope_Rep1 1083.60767971435 1083.60658993586 72.124 2 0.01716126610190577 0.007809288943690916 0.05421696213607618 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 41674 20639 IAGPGFINV True PC9_epitope_Rep5 886.49125297978 886.49070496793 84.441 1 0.017124227977500128 0.007809288943690916 0.05425510495398769 ['ENSG00000113643|ENST00000231572|RARS1', 'nc|ENSG00000113643|P54136-2|RARS1', 'ENST00000521939.5_1_5:167913503-167921691:+|nuORF'] 22722 15081 ETSIAECLTY True H1975_Epitope_Rep2 1128.50089125696 1128.49978993586 63.16 2 0.01711682842032555 0.007809288943690916 0.054262727845229286 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 3973 13267 AHDTTLVAL True PC9_epitope_Rep2 939.50254593947 939.50199496793 56.307 1 0.01710358446594328 0.007809288943690916 0.05427637372188857 ['ENSG00000134575|ENST00000672073|ACP2'] 114511 4611 TQAPAVATT True NCI_RA007_Epitope_Rep5 858.44469671018 858.44414496793 24.41 1 0.0170899600614916 0.007809288943690916 0.05429041452975003 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF'] 106831 8579 SVAQPIHL True H1975_Epitope_Rep3 863.48650195251 863.48540993586 37.99 2 0.0170764658378717 0.007809288943690916 0.0543043241128282 ['nc|ENSG00000161888|Q8NBT2-2|SPC24', 'ENST00000423327.2_1_19:11257861-11259987:-|nuORF', 'ENSG00000161888|ENST00000592540|SPC24'] 133359 19988 VVVGDLVEV True PC9_epitope_Rep4 927.5276980581499 927.5271449679301 85.017 1 0.017072316908627726 0.007809288943690916 0.05430860133544432 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 40106 10784 HPWETVTTAA True PC9_epitope_Rep4 1111.52982331647 1111.5287299358602 49.239 2 0.017069181322630494 0.007809288943690916 0.0543118340633779 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 13933 12368 DRAGSIVL True PC9_epitope_Rep3 829.46576650793 829.46466993586 52.603 2 0.017050336656997008 0.007809288943690916 0.05433126586828535 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 109720 3223 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 16.962 2 0.01703005632447301 0.007809288943690916 0.05435218443652861 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 121292 5203 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44906993586 25.085 2 0.01701898712843625 0.007809288943690916 0.05436360477198923 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 36013 20334 GTYDIFYTA True PC9_epitope_Rep4 1049.47057710485 1049.46948993586 86.359 2 0.017009938924909665 0.007809288943690916 0.054372941465298405 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 125844 17708 VLAETLTQV True PC9_epitope_Rep4 972.5491617787198 972.54806993586 76.138 2 0.017002535407520565 0.007809288943690916 0.054380582011369624 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 90179 3733 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 18.873 2 0.016996963474413714 0.007809288943690916 0.05438633291399598 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 132695 9857 VVHAVEVAL True NCI_RA007_Epitope_Rep1 935.5440168286299 935.54290993586 42.344 2 0.01696008361005343 0.007809288943690916 0.05442440992060155 ['CON__P12763'] 35197 10711 GRADGYVL True PC9_epitope_Rep5 849.43446637965 849.43336993586 46.19 2 0.016947670311441516 0.007809288943690916 0.05443723107478097 ['ENSG00000142937|ENST00000396651|RPS8'] 106570 5598 STMVDVRVMKK True NCI_RA007_Epitope_Rep4 1292.6944631967597 1292.6928149037901 28.132 3 0.01694571342370271 0.007809288943690916 0.05443925248449144 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 39784 19067 HMAVAFVL True PC9_epitope_Rep4 886.4734947406599 886.47238993586 81.432 2 0.016921578119705287 0.007809288943690916 0.054464188628403826 ['ENSG00000164919|ENST00000520468|COX6C'] 76158 13872 NNALGDLVLY True H1975_Epitope_Rep2 1090.56587447202 1090.56476993586 58.503 2 0.016912515769283515 0.007809288943690916 0.05447355409532695 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.G1527Wfs*20|1|0.85|ENSG00000105429|chr19:42356406-42356407|-/T|frameshift_variant'] 114717 14125 TQIHSMVNL True PC9_epitope_Rep5 1041.52771514149 1041.52660993586 59.342 2 0.016908176079416463 0.007809288943690916 0.05447803940583079 ['ENST00000371873.9_1_1:47834144-47834267:+|nuORF'] 138961 6162 YKKRLSVEL True NCI_RA007_Epitope_Rep4 1134.67609362734 1134.6744449037901 30.312 3 0.01690285490457168 0.007809288943690916 0.054483539548513836 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 76937 5893 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 28.06 2 0.016897483019529296 0.007809288943690916 0.054489092568377355 ['ENSG00000241685|ENST00000262942|ARPC1A'] 85401 5433 QEVPGPAA True H1975_Epitope_Rep2 767.3813681776298 767.3808149679301 25.924 1 0.01689276686867243 0.007809288943690916 0.054493968125534774 ['ENSG00000146278|ENST00000336032|PNRC1'] 44401 18806 ILFYRSNV True PC9_epitope_Rep4 1010.5549158654999 1010.55380993586 80.422 2 0.016889663041680002 0.007809288943690916 0.054497177057140016 ['ENSG00000205030|ENST00000378397|OR5L2'] 33293 6582 GKMERQVFL True NCI_RA007_Epitope_Rep3 1106.5906497512199 1106.58954993586 32.941 2 0.01685997474514172 0.007827476038338659 0.054527878507932816 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 105580 15933 SSDLLSDIY True H1975_Epitope_Rep2 1011.47605640811 1011.47494993586 66.486 2 0.016859075897687925 0.007827476038338659 0.05452880825072386 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 135112 9661 WEEETVPTT True H1975_Epitope_Rep2 1090.4818700645399 1090.48127496793 42.141 1 0.01685151765202623 0.007827476038338659 0.054536626803384745 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 36692 23305 GVISGLFEL True PC9_epitope_Rep3 933.5171333744499 933.51658496793 94.923 1 0.016844245048999784 0.007827476038338659 0.05454415074268254 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 114764 5534 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.5496749679301 28.766 1 0.016817388984385246 0.007827476038338659 0.054571942301995226 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 137216 19703 YAYFNFPEL True H1975_Epitope_Rep1 1162.5335117145798 1162.5324099358602 82.012 2 0.016795197042540733 0.007827476038338659 0.054594916020524055 ['ENSG00000137628|ENST00000393743|DDX60'] 103131 5163 SPHPPSEVTA True PC9_epitope_Rep4 1020.48762415132 1020.48652993586 26.547 2 0.01679063571373512 0.007827476038338659 0.054599639016786015 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 1804 9984 AEHPIVIVC True H1975_Epitope_Rep2 979.5160878286299 979.51498993586 43.393 2 0.016719693463546226 0.007827476038338659 0.05467313875778699 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276Q|1|0.1|ENSG00000150990|chr12:124977403-124977403|C/G|missense_variant'] 107323 14553 SVLEPPLFLK True NCI_RA007_Epitope_Rep5 1141.6746966450098 1141.67358993586 62.65 2 0.01671409966927835 0.007827476038338659 0.054678937654285976 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 109931 14374 TEGEPPFLP True H1975_Epitope_Rep2 985.4756624852898 985.47511496793 60.439 1 0.0166981493677182 0.007827476038338659 0.054695475555291174 ['ENSG00000241058|ENST00000377304|NSUN6'] 21433 8852 ERIQHAVQL True PC9_epitope_Rep3 1092.60399131624 1092.60288993586 39.001 2 0.0166864822914771 0.007827476038338659 0.0547075750326377 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 16801 22140 EEVQSLPLPL True PC9_epitope_Rep1 1123.6124903112698 1123.6113899358602 89.974 2 0.016678590040403885 0.007827476038338659 0.05471576102599693 ['ENSG00000145912|ENST00000274606|NHP2'] 103000 16886 SPFGTITSA True PC9_epitope_Rep5 879.43379767331 879.43324496793 69.964 1 0.016658209693104366 0.007827476038338659 0.05473690454914607 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 23823 17975 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.6640899358601 74.444 2 0.01665812983787736 0.007827476038338659 0.054736987407837105 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 67474 5632 LSSSSFSR True PC9_epitope_Rep1 869.42429561877 869.42318993586 26.49 2 0.016615630592170014 0.007827476038338659 0.05478109967832078 ['LAMP1|p.N181S|1|0.39|ENSG00000185896|chr13:113310847-113310847|A/G|missense_variant'] 73684 20899 MYPDVFAHF True PC9_epitope_Rep2 1125.4953523840497 1125.4942499358601 85.833 2 0.016579732134644306 0.007827476038338659 0.05481838329857988 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 48246 11771 IYQKAFEHL True PC9_epitope_Rep5 1147.6025943339098 1147.60093490379 50.274 3 0.016561629805659606 0.007827476038338659 0.05483719199131057 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 31872 5106 GELKTQMTSA True NCI_RA007_Epitope_Rep4 1064.51721002744 1064.5161099358602 26.15 2 0.016555901017718658 0.007827476038338659 0.05484314542000329 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 44331 14517 ILDPHVVLL True H1975_Epitope_Rep3 1017.6222671493299 1017.6211699358599 61.202 2 0.01655100087875421 0.007827476038338659 0.054848238125911275 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 45288 19711 IPVYSPLSA True PC9_epitope_Rep2 945.5171333744499 945.51602993586 81.206 2 0.01654980556635222 0.007827476038338659 0.05484948047072499 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 137183 8748 YAYDGKDYLA True NCI_RA007_Epitope_Rep3 1177.5291546101298 1177.52804993586 41.5 2 0.016542224302570664 0.007827476038338659 0.05485736057357311 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 77034 6728 NRISHGEVL True PC9_epitope_Rep1 1023.5461420869499 1023.54504993586 30.684 2 0.016527242092975736 0.007827476038338659 0.05487293607790275 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 41593 14166 IADEGTWTL True NCI_RA007_Epitope_Rep3 1004.48147614172 1004.48036993586 63.011 2 0.016492676748832754 0.007827476038338659 0.05490888401253007 ['ENSG00000170584|ENST00000302764|NUDCD2'] 68178 6537 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep3 1056.49099566004 1056.4898899358602 30.113 2 0.016479080104527154 0.007827476038338659 0.05492302979277548 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 76292 7273 NPNQYHYVA True PC9_epitope_Rep5 1104.49885754136 1104.49776993586 32.94 2 0.016449508855671875 0.007827476038338659 0.05495380564735637 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A'] 5035 9413 ALIVEPSR True PC9_epitope_Rep1 883.51271670035 883.51160993586 41.065 2 0.01643298171870855 0.007827476038338659 0.05497101217363918 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 101859 10849 SLPKGVVEV True PC9_epitope_Rep6 926.54368247546 926.54258993586 52.59 2 0.016417944397164298 0.007849221923059372 0.05498667147073499 ['ENSG00000149257|ENST00000358171|SERPINH1'] 7126 13067 AQVVQVVL True NCI_RA007_Epitope_Rep4 854.5225531080598 854.52144993586 57.361 2 0.016409598165989414 0.007849221923059372 0.05499536449427555 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.K423R|1|0.3|ENSG00000186432|chr3:160508211-160508211|T/C|missense_variant'] 78068 23167 NVVEALIAL True PC9_epitope_Rep5 940.5593325395998 940.55822993586 94.101 2 0.0164018382105056 0.007849221923059372 0.05500344789033111 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 120374 3508 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 18.343 2 0.01640022086987531 0.007849221923059372 0.055005132765265696 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 5666 21411 APAELLAALPA True PC9_epitope_Rep2 1035.5964463243097 1035.5953499358602 87.828 2 0.016395807581764867 0.007849221923059372 0.055009730551110095 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 47945 19748 IYILDPELL True NCI_RA007_Epitope_Rep4 1087.61651306255 1087.61540993586 85.34 2 0.01637183276734527 0.007849221923059372 0.0550347131262073 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 37836 4937 GYKAGMTHI True NCI_RA007_Epitope_Rep4 976.4800366730799 976.47892993586 25.452 2 0.016367659006844268 0.007862351868732909 0.05503906327531796 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000484615.5_1_22:39713464-39715605:-|nuORF', 'ENST00000460589.5_1_22:39713464-39715412:-|nuORF', 'ENST00000465618.5_1_22:39712851-39715803:-|nuORF', 'ENST00000467870.1_1_14:57445264-57445663:+|nuORF', 'ENST00000413027.1_1_6:31248141-31248948:+|nuORF', 'ENST00000461967.1_1_22:39714348-39714516:-|nuORF'] 57495 5898 LEDKPPAPP True H1975_Epitope_Rep1 962.5072969667399 962.50618993586 27.758 2 0.01634847176844559 0.007862351868732909 0.05505906500969372 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 79739 5999 PDYNNRLR True NCI_RA007_Epitope_Rep2 1046.52574099554 1046.52464993586 27.945 2 0.01632677918380232 0.007862351868732909 0.05508168560086875 ['ENST00000491239.2_1_1:27614218-27630434:+|nuORF', 'nc|ENSG00000142784|Q8N5D0-5|WDTC1', 'nc|ENSG00000142784|Q8N5D0-3|WDTC1', 'nc|ENSG00000142784|Q8N5D0-6|WDTC1', 'nc|ENSG00000142784|Q8N5D0-2|WDTC1', 'WDTC1|p.A659Cfs*5|1|0.16|ENSG00000142784|chr1:27306317-27306318|-/G|frameshift_variant', 'nc|ENSG00000142784|Q8N5D0-4|WDTC1', 'ENSG00000142784|ENST00000319394|WDTC1'] 585 11340 AARLPLDAA True PC9_epitope_Rep1 896.5079656730799 896.50686993586 48.498 2 0.016325049855365332 0.007862351868732909 0.05508348923682183 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 47585 11026 IVVNLTGR True PC9_epitope_Rep2 870.5287011176599 870.52760993586 47.731 2 0.01630554134132709 0.007862351868732909 0.05510383935779088 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 110957 7323 THAGAHLDL True PC9_epitope_Rep1 933.4668291370899 933.4657299358599 32.98 2 0.01630407262001248 0.007862351868732909 0.05510537168926892 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 44949 11854 IPAAIATA True PC9_epitope_Rep2 726.4275900940601 726.4270449679301 50.924 1 0.016277047300076525 0.007862351868732909 0.05513357369234592 ['ENSG00000144224|ENST00000272638|UBXN4'] 110976 6115 THAPATLEA True PC9_epitope_Rep1 909.45559574705 909.45448993586 28.336 2 0.0162749518528932 0.007862351868732909 0.05513576086823724 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 80386 6751 PGHLQEGFG True PC9_epitope_Rep6 940.4402800360799 940.43918993586 34.775 2 0.0162697441377284 0.007862351868732909 0.05514119685962636 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 69661 6682 LVDSNNPKI True PC9_epitope_Rep4 998.53965972418 998.53856993586 32.884 2 0.0162646724548477 0.007862351868732909 0.05514649127701606 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 48214 16808 IYPVKYTQTF True PC9_epitope_Rep3 1258.65977485686 1258.6586699358602 69.801 2 0.016260190821868276 0.007862351868732909 0.05515117007700445 ['ENSG00000112378|ENST00000421351|PERP'] 1953 6460 AEINGTMNA True H1975_Epitope_Rep3 919.4069313024701 919.40582993586 29.82 2 0.016256737665093828 0.007862351868732909 0.055154775374901585 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 32653 7361 GGPGGFGPG True NCI_RA007_Epitope_Rep5 701.3132886178099 701.31274496793 34.994 1 0.01624748538635334 0.007862351868732909 0.05516443624551202 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546', 'KRT2|p.L135I|1|0.27|ENSG00000172867|chr12:52651740-52651740|A/T|missense_variant'] 31887 12990 GELPAWAA True H1975_Epitope_Rep2 813.40210362221 813.4015549679301 55.083 1 0.01623955598863374 0.007862351868732909 0.05517271691587949 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 5282 12336 ALQEMVHQV True PC9_epitope_Rep1 1053.52771514149 1053.52660993586 52.307 2 0.01623853565903274 0.007862351868732909 0.05517378251991125 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 46313 11378 ISQIVSSITAS True H1975_Epitope_Rep3 1104.60265390356 1104.6020749679299 48.877 1 0.016232268998185216 0.007862351868732909 0.05518032761628634 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 15334 8479 EAGDEFELR True H1975_Epitope_Rep1 1064.47745339044 1064.47634993586 37.544 2 0.016229758988626778 0.007862351868732909 0.05518294932670745 ['nc|ENSG00000171552|Q07817-2|BCL2L1', 'nc|ENSG00000171552|Q07817-3|BCL2L1', 'ENSG00000171552|ENST00000307677|BCL2L1'] 2310 12788 AEPDFIFRA True H1975_Epitope_Rep2 1064.52909504048 1064.5279899358602 54.294 2 0.016209048643806543 0.007862351868732909 0.05520458521320992 ['ENSG00000166439|ENST00000299563|RNF169'] 111164 9643 THGPPVQL True PC9_epitope_Rep1 847.45520182423 847.45410993586 41.947 2 0.01618355563615272 0.007862351868732909 0.05523122701933196 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 93088 12712 RPNGVITGLAA True PC9_epitope_Rep5 1067.60874234351 1067.60764993586 53.902 2 0.016172085359637486 0.007862351868732909 0.055243217611611994 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1', 'nc|ENSG00000122068|Q96QD9-4|FYTTD1'] 102998 15713 SPFGTITSA True PC9_epitope_Rep4 879.43379767331 879.43270993586 68.366 2 0.016167456299678584 0.007862351868732909 0.055248057257969135 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 36524 6030 GVGPVPARA True PC9_epitope_Rep5 822.47118624154 822.47008993586 28.187 2 0.01616568152590017 0.007862351868732909 0.05524991286211274 ['ENSG00000129636|ENST00000320640|ITFG1'] 61353 16189 LISQIVSSITA True H1975_Epitope_Rep1 1130.6546894764201 1130.65358993586 67.618 2 0.016135650548722565 0.007862351868732909 0.055281319295088525 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 113735 13842 TMAKESSIIGV True PC9_epitope_Rep3 1134.59546034814 1134.5943699358602 58.325 2 0.016102492425698663 0.007862351868732909 0.05531601304722176 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 30276 21175 GAAAFFTAV True PC9_epitope_Rep5 853.4334037504899 853.4328549679301 86.499 1 0.01609766633489602 0.007862351868732909 0.055321064128357474 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 24522 18758 FAFPGSTNSL True PC9_epitope_Rep6 1039.49746055903 1039.49636993586 84.793 2 0.016093126394704765 0.007862351868732909 0.055325816062681624 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 6318 4638 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 24.359 2 0.01608551687379333 0.007862351868732909 0.0553337816609214 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 130070 10578 VSDFGGRSL True PC9_epitope_Rep3 936.46649478392 936.46538993586 45.635 2 0.016078436051395945 0.007862351868732909 0.05534119466257851 ['ENSG00000132383|ENST00000254719|RPA1'] 64434 7603 LPNNVKTAV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 34.194 2 0.01606792429722387 0.007862351868732909 0.05535220104613506 ['ENSG00000261456|ENST00000568584|TUBB8'] 11813 14658 DHFISSSL True PC9_epitope_Rep5 904.4290466460401 904.4279499358599 61.386 2 0.016058298496467595 0.007862351868732909 0.05536228135652581 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'ENST00000566127.1_1_16:29552630-29552998:-|nuORF', 'ENST00000568855.1_1_16:70265056-70269235:-|nuORF'] 60527 10425 LHDINAQL True PC9_epitope_Rep2 922.4872302285 922.48612993586 45.42 2 0.016042026794497004 0.007862351868732909 0.05537932478390002 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 45280 19900 IPVSGITVV True PC9_epitope_Rep3 883.53786881903 883.53676993586 81.786 2 0.01602416562107083 0.007862351868732909 0.055398038002199335 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 74319 12434 NELNGIVGG True PC9_epitope_Rep2 871.4399456829099 871.4393949679301 53.134 1 0.016016839213672005 0.007862351868732909 0.05540571540058205 ['ENSG00000144815|ENST00000273347|NXPE3'] 8499 4186 ATSDMDIGK True NCI_RA007_Epitope_Rep5 936.4222470134399 936.42114993586 22.629 2 0.015994237640411288 0.007862351868732909 0.055429405238928774 ['ENSG00000102158|ENST00000618282|MAGT1'] 12059 16588 DHTAPLLL True PC9_epitope_Rep4 878.48616759934 878.48506993586 71.782 2 0.015976820380376424 0.007862351868732909 0.05544766678383899 ['ENSG00000188352|ENST00000338382|FOCAD'] 58852 13884 LESTPSPVVF True H1975_Epitope_Rep3 1074.55972646242 1074.55917496793 58.714 1 0.015974972472735355 0.007862351868732909 0.05544960455533906 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 25658 7677 FEQEMATAA True H1975_Epitope_Rep3 996.4222470134398 996.42114993586 34.512 2 0.015959383018531975 0.007862351868732909 0.05546595432742283 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 7087 13869 AQSGTIMAV True PC9_epitope_Rep1 876.43750315476 876.43640993586 58.188 2 0.015916086999498567 0.007862351868732909 0.055511382603079286 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3', 'MAP2K3|p.M115Ifs*45|1|0.11|ENSG00000034152|chr17:21300939-21300939|G/-|frameshift_variant'] 15430 9927 EALATLPSSP True H1975_Epitope_Rep3 984.51277627 984.51222496793 43.217 1 0.015904318192922737 0.007862351868732909 0.055523736254665536 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 17614 6759 EHINSVSAM True PC9_epitope_Rep2 986.44913046762 986.44802993586 31.406 2 0.01589565808160211 0.007862351868732909 0.05553282815969829 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 114908 6031 TQSPSVKSL True PC9_epitope_Rep2 945.51311062317 945.51200993586 28.592 2 0.015884586765297005 0.007862351868732909 0.05554445326310477 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant'] 130804 9974 VTANTMENV True PC9_epitope_Rep2 977.44879611445 977.44768993586 43.694 2 0.015881687120571628 0.007862351868732909 0.05554749827638293 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant'] 77989 21178 NVPEGLLATV True PC9_epitope_Rep1 1011.56006081559 1011.55896993586 86.296 2 0.015870357835646668 0.007862351868732909 0.0555593968416737 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 141980 19466 YVISEGFLKA True PC9_epitope_Rep5 1125.60701100801 1125.6059099358602 79.929 2 0.01584933805747258 0.007862351868732909 0.05558147834610729 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 44948 12254 IPAAIATA True PC9_epitope_Rep1 726.4275900940601 726.4270449679301 51.995 1 0.015826107171435948 0.007862351868732909 0.055605890978396966 ['ENSG00000144224|ENST00000272638|UBXN4'] 130895 18139 VTDDLVCLVY True H1975_Epitope_Rep2 1138.55801221026 1138.55747496793 75.18 1 0.01582056428950401 0.007862351868732909 0.05561171711797069 ['ENSG00000143742|ENST00000304786|SRP9'] 96639 10169 SAIGLADPP True H1975_Epitope_Rep3 839.4388830537499 839.43778993586 44.16 2 0.015809229095611912 0.007862351868732909 0.055623633125399814 ['ENSG00000186838|ENST00000335426|SELENOV'] 47998 23038 IYLDGIITI True PC9_epitope_Rep2 1019.59029831471 1019.58920993586 94.108 2 0.015791242027160108 0.007862351868732909 0.05564254612639352 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000172785|Q9BRT8-3|ZNG1A', 'ENST00000431099.3_1_9:160122-173274:-|nuORF', 'ENST00000495302.5_1_9:151417-166034:-|nuORF', 'ENST00000377445.5_9:69238165-69262487:-|nuORF', 'ENST00000492566.1_1_2:114195517-114220159:+|nuORF', 'ENST00000495626.2_9:69245151-69262487:-|nuORF', 'ENST00000476973.2_9:69243634-69261296:-|nuORF', 'ENST00000461037.2_9:69234942-69249581:-|nuORF', 'nc|ENSG00000215126|Q5RIA9-3|ZNG1E'] 90749 3636 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5876299358601 20.062 2 0.01578774781258228 0.007862351868732909 0.055646220823913295 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 32049 6619 GERIPDVAA True NCI_RA007_Epitope_Rep3 926.4821448480599 926.48104993586 33.096 2 0.015782309078904988 0.007862351868732909 0.05565194087284638 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 141172 15680 YSVDIPLDK True PC9_epitope_Rep2 1048.54407639828 1048.5429699358601 65.59 2 0.015769339631546687 0.007862351868732909 0.05566558309408675 ['ENSG00000131469|ENST00000253788|RPL27'] 1179 11367 AEAPTALVP True H1975_Epitope_Rep2 867.4701831820299 867.46908993586 48.773 2 0.01576363192447871 0.007862351868732909 0.05567158774627635 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'ENST00000474741.5_1_22:32009833-32014520:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 86122 20824 QHWPVFVEV True PC9_epitope_Rep1 1139.5763795860698 1139.5752899358602 84.928 2 0.015754593528394634 0.007862351868732909 0.05568109744903272 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3'] 69549 13620 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45858993586 57.527 2 0.01574680564519238 0.007862351868732909 0.05568929249435945 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 2280 7533 AENVAVPEA True NCI_RA007_Epitope_Rep3 898.4396113297399 898.4390649679301 36.753 1 0.015740965052239646 0.007882805914382703 0.05569543908817533 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 21254 12140 ERDRAMLAL True PC9_epitope_Rep5 1073.56516327937 1073.56406993586 51.686 2 0.015733963721963465 0.007882805914382703 0.0557028079624692 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 111008 10146 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5294499358602 43.902 2 0.015729710780267483 0.007882805914382703 0.05570728455639389 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 119349 16112 VAPEEHPLLL True PC9_epitope_Rep2 1116.6179100448799 1116.6168099358601 67.234 2 0.01572758814485476 0.007882805914382703 0.055709518926066334 ['ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 54303 14613 KYAMMFAEL True NCI_RA007_Epitope_Rep4 1102.51912460374 1102.51802993586 63.6 2 0.015723391901724275 0.007882805914382703 0.05571393627214998 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 120879 20980 VENAVVLTV True PC9_epitope_Rep3 942.5385970950199 942.53750993586 85.979 2 0.01572104219072795 0.007882805914382703 0.05571640991589294 ['ENSG00000186190|ENST00000375494|BPIFB3'] 1990 6021 AEIPETSNA True H1975_Epitope_Rep2 930.4294405688601 930.42834993586 28.138 2 0.015716209912568023 0.007882805914382703 0.05572149734860262 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 104948 12814 SRDEYYHLL True PC9_epitope_Rep4 1194.56693710118 1194.56530490379 57.15 3 0.015708650505532336 0.007882805914382703 0.05572945666879565 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 107840 19298 SVVELVNKL True PC9_epitope_Rep3 999.5964463243099 999.59534993586 79.451 2 0.01569204014841594 0.007882805914382703 0.05574694901815717 ['ENSG00000128335|ENST00000358502|APOL2'] 73780 22064 NAFSENFLEV True PC9_epitope_Rep3 1168.5400536470001 1168.53894993586 90.167 2 0.01568797960379175 0.007882805914382703 0.05575122585483845 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 83206 6559 PSTSVPAP True H1975_Epitope_Rep3 754.3861192049 754.3855749679301 30.188 1 0.01568584943878953 0.007882805914382703 0.05575346959390335 ['ENSG00000153201|ENST00000283195|RANBP2'] 55255 17513 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.4992249679301 72.662 1 0.015681511781539464 0.007882805914382703 0.0557580387499395 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 116663 8456 TVAVGVIK True PC9_epitope_Rep1 785.50108938749 785.49998993586 37.362 2 0.015678272878777162 0.007882805914382703 0.05576145071072567 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 141704 11308 YTVEDTHYV True PC9_epitope_Rep2 1125.49785448185 1125.4967499358602 48.818 2 0.015674081904221263 0.007902887856427074 0.05576586586636812 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 58576 11958 LEQNIQLPAA True H1975_Epitope_Rep2 1095.59242357303 1095.5913299358601 51.075 2 0.015661152799696418 0.007902887856427074 0.055779488364273204 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 5667 21535 APAELLAALPA True PC9_epitope_Rep3 1035.5964463243097 1035.5953499358602 88.131 2 0.0156579799237391 0.007902887856427074 0.0557828318178297 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 28773 14104 FSTALYGESDL True H1975_Epitope_Rep1 1201.55028397753 1201.54918993586 59.42 2 0.01565628305648308 0.007902887856427074 0.05578461997780685 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 84359 15576 PYYSKFILI True NCI_RA007_Epitope_Rep4 1142.6375828603 1142.63648993586 67.664 2 0.015652195095879742 0.007902887856427074 0.05578892806579993 ['ENSG00000164815|ENST00000297431|ORC5'] 105218 13287 SRIARALAL True PC9_epitope_Rep3 969.6083484206899 969.60724993586 56.143 2 0.015625356416633988 0.007902887856427074 0.05581721868897141 ['ENSG00000142871|ENST00000451137|CCN1'] 119526 9374 VASGSAVVL True H1975_Epitope_Rep3 801.45961849833 801.4590749679301 41.057 1 0.01560731208550102 0.007902887856427074 0.05583624577849848 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 90162 5092 REDGPGIPA True H1975_Epitope_Rep2 910.4508447197799 910.44974993586 24.668 2 0.015605340974607385 0.007902887856427074 0.05583832456364404 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'ENST00000568642.5_1_16:46706372-46712929:-|nuORF'] 102035 17969 SLQTSDVVI True PC9_epitope_Rep1 960.5127762699999 960.51166993586 73.911 2 0.01560106098993165 0.007902887856427074 0.055842838564912144 ['MAGI2|p.P1249Qfs*6|1|0.11|ENSG00000187391|chr7:78019937-78019937|G/-|frameshift_variant', 'nc|ENSG00000187391|Q86UL8-2|MAGI2', 'ENSG00000187391|ENST00000354212|MAGI2'] 109999 9607 TEILSRNLP True H1975_Epitope_Rep2 1041.58185888933 1041.5807699358602 41.929 2 0.01558316362236809 0.007902887856427074 0.055861717731649906 ['nc|ENSG00000182931|Q8IUB3-2|WFDC10B'] 128044 8700 VPKNSDPWAA True PC9_epitope_Rep2 1083.53490869691 1083.53380993586 38.827 2 0.015581651742847692 0.007902887856427074 0.05586331278709233 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 43609 5744 IGTVPVGR True NCI_RA007_Epitope_Rep2 797.47593726881 797.47484993586 26.96 2 0.015567452031002975 0.007902887856427074 0.05587829550808165 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 121298 5566 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44906993586 26.451 2 0.015564112088944329 0.007902887856427074 0.05588182009939516 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 5665 21633 APAELLAALPA True PC9_epitope_Rep1 1035.5964463243097 1035.5953499358602 88.037 2 0.01554695544012675 0.007902887856427074 0.0558999281148653 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 71737 10988 MEENFAVEA True H1975_Epitope_Rep1 1038.4328116971399 1038.43170993586 47.23 2 0.015532368661463538 0.007902887856427074 0.05591532752053213 ['ENSG00000026025|ENST00000544301|VIM'] 28847 16682 FTAQVLIL True H1975_Epitope_Rep1 903.5429541994698 903.5424049679301 69.563 1 0.01552942671663453 0.007924579860636698 0.055918433779882315 ['ENST00000447052.1_1_21:24762753-24763314:+|nuORF'] 142167 11338 YVTEKVLAA True PC9_epitope_Rep3 992.5542471591598 992.55314993586 48.618 2 0.015513865050218381 0.007924579860636698 0.05593486694318856 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000136872|ENST00000647789|ALDOB', 'ENSG00000109107|ENST00000226253|ALDOC'] 71652 5623 MEADLKAAA True H1975_Epitope_Rep2 918.4480678384599 918.44696993586 26.628 2 0.015496670698630729 0.007924579860636698 0.05595302880663248 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.E488K|1|0.2|ENSG00000102316|chrX:54815323-54815323|G/A|missense_variant'] 47255 14213 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.4580849679301 59.676 1 0.015492538109619414 0.007924579860636698 0.05595739464977212 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 55862 16873 LAPSLALL True H1975_Epitope_Rep1 796.50584041476 796.50529496793 70.313 1 0.015476411902746255 0.007924579860636698 0.05597443371915729 ['ENST00000338779.10_1_16:70714719-70719815:-|nuORF'] 30703 13547 GALETIWR True PC9_epitope_Rep6 944.5079656730799 944.50686993586 63.84 2 0.015472538705761282 0.007924579860636698 0.05597852679780937 ['ENSG00000162461|ENST00000294454|SLC25A34'] 138276 15066 YHAPDTALSTL True PC9_epitope_Rep2 1187.58225281215 1187.5811499358601 63.208 2 0.015441205158660267 0.007944276251394232 0.05601164812717334 ['ENST00000263056.5_1_10:30726187-30726295:+|nuORF'] 128413 14199 VPRPPSLLA True PC9_epitope_Rep2 948.5756513100799 948.57454993586 59.883 2 0.015412131134808809 0.007944276251394232 0.0560423953035807 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A', 'ENST00000494435.5_1_21:47924311-47965916:+|nuORF'] 8891 19765 AVFPSIVG True PC9_epitope_Rep4 788.4432401582 788.44269496793 84.15 1 0.015406239719336565 0.007944276251394232 0.05604862743484624 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 54624 7372 KYLEERAMRQF True NCI_RA007_Epitope_Rep4 1469.74491854649 1469.74327490379 34.997 3 0.015403578105571207 0.007944276251394232 0.0560514431619099 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 81088 15841 PITPSPTV True PC9_epitope_Rep3 810.4487194614601 810.44762993586 66.086 2 0.015389314076710445 0.007944276251394232 0.05606653507464386 ['ENST00000486360.1_1_1:203045208-203045709:+|nuORF'] 31912 12313 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43661496793 52.446 1 0.01538377731495054 0.007944276251394232 0.05607239408236543 ['ENSG00000100726|ENST00000262319|TELO2'] 98135 9833 SESLIKQIP True H1975_Epitope_Rep3 1013.57571087973 1013.5746099358599 42.852 2 0.015381229243403684 0.007944276251394232 0.05607509062234301 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 121845 16407 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 67.932 2 0.015378443244635942 0.007944276251394232 0.05607803907382538 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 62748 14831 LLLPGELAK True PC9_epitope_Rep6 952.5957180483199 952.59462993586 69.021 2 0.015376849950182955 0.007944276251394232 0.05607972533072832 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 90174 3571 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 18.073 2 0.015348273401402629 0.007944276251394232 0.05610997622818412 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 108172 20797 SYGDILHVI True PC9_epitope_Rep1 1015.53384606775 1015.53274993586 84.822 2 0.015344860044724448 0.007944276251394232 0.056113590468391074 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 120557 11654 VEGIETVTV True H1975_Epitope_Rep3 945.50187723313 945.50078993586 49.963 2 0.015338719377873969 0.007944276251394232 0.056120093004737144 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'ENST00000523243.5_1_8:135490727-135577256:-|nuORF', 'EFR3A-ZFAT|2|fusion', 'EFR3A-ZFAT|1|fusion'] 111232 10437 THITAQTAVL True PC9_epitope_Rep2 1053.58185888933 1053.5807699358602 45.465 2 0.015335062780285489 0.007944276251394232 0.05612396537737953 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 40361 10442 HQSAESLTL True PC9_epitope_Rep5 984.48762415132 984.48652993586 45.152 2 0.015334138189974247 0.007944276251394232 0.056124944562067555 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'SGSM2|p.P666Rfs*58|1|0.3|ENSG00000141258|chr17:2375519-2375519|C/-|frameshift_variant', 'ENSG00000141258|ENST00000268989|SGSM2', 'ENST00000574857.1_1_17:2267361-2267601:+|nuORF'] 89146 12074 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.57528993586 51.437 2 0.015332991649897298 0.007944276251394232 0.05612615882135151 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 30296 5840 GAAGGLRGV True PC9_epitope_Rep1 756.4242360491199 756.42312993586 27.278 2 0.01531934007559819 0.007944276251394232 0.056140618357206136 ['ENST00000291442.3_1_19:17351565-17356474:-|nuORF'] 53009 10760 KPIEELQNV True PC9_epitope_Rep2 1068.58152453616 1068.5804299358601 46.707 2 0.015293751662294276 0.007944276251394232 0.05616772938697021 ['ENSG00000166920|ENST00000396650|C15orf48'] 31413 5826 GEAAGSPVP True H1975_Epitope_Rep2 783.37628279719 783.37573496793 27.401 1 0.01528496259584304 0.007961964557883483 0.056177043900794484 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 92478 6471 RLVESKVEL True NCI_RA007_Epitope_Rep5 1071.62880908175 1071.6277099358601 31.556 2 0.015275124087927382 0.007961964557883483 0.05618747208936287 ['ENST00000452767.1_1_10:71914847-71917573:-|nuORF', 'nc|ENSG00000079332|Q9NR31-2|SAR1A', 'ENSG00000079332|ENST00000373241|SAR1A'] 108113 12739 SYDPDFNQL True NCI_RA007_Epitope_Rep4 1097.46655435357 1097.46544993586 56.059 2 0.01527334750336128 0.007961964557883483 0.05618935532341725 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 1238 6727 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.40686993586 30.789 2 0.01527114717745776 0.007961964557883483 0.0561916878075735 ['ENSG00000162783|ENST00000367577|IER5'] 106773 13565 SVAAQLTGV True PC9_epitope_Rep6 844.4654321547599 844.46432993586 63.913 2 0.015270864092354014 0.007961964557883483 0.05619198790135663 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 34753 20314 GQFGVGFYSA True PC9_epitope_Rep2 1031.4712458111896 1031.47014993586 83.561 2 0.015263319949417261 0.007961964557883483 0.056199985802288896 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 64896 11475 LQEDPPAGV True PC9_epitope_Rep5 924.4552613938798 924.45416993586 49.135 2 0.015261781056332776 0.007961964557883483 0.05620161736917287 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 40611 12003 HRIQDLEQL True PC9_epitope_Rep2 1150.6094706195 1150.60783490379 51.487 3 0.015235839674603737 0.007961964557883483 0.05622912677888057 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 1455 7609 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40140993586 34.22 2 0.015234707752110598 0.007961964557883483 0.05623032737025914 ['ENSG00000173545|ENST00000308683|ZNF622'] 141807 10670 YVDDGLIS True H1975_Epitope_Rep1 880.4178132559999 880.41726496793 46.001 1 0.015231968898498024 0.007961964557883483 0.05623323246479755 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 17608 12672 EHINEGETAML True PC9_epitope_Rep5 1242.55505208814 1242.5539499358601 53.747 2 0.015209108992078904 0.007961964557883483 0.056257484675523564 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 32784 14260 GHFDGVQDL True PC9_epitope_Rep1 986.4457593393399 986.44466993586 59.675 2 0.015186632224135585 0.007961964557883483 0.056281338720674964 ['nc|ENSG00000134759|Q6IA86-4|ELP2', 'nc|ENSG00000134759|Q6IA86-2|ELP2', 'nc|ENSG00000134759|Q6IA86-3|ELP2', 'nc|ENSG00000134759|Q6IA86-5|ELP2', 'ENSG00000134759|ENST00000358232|ELP2', 'nc|ENSG00000134759|Q6IA86-6|ELP2', 'nc|ENSG00000134759|Q6IA86-7|ELP2'] 142284 5247 YYAKEIHKF True NCI_RA007_Epitope_Rep4 1197.61824439805 1197.6166049037902 26.723 3 0.015148833545301152 0.007961964557883483 0.05632147211601485 ['nc|ENSG00000119699|P10600-2|TGFB3', 'ENSG00000119699|ENST00000238682|TGFB3'] 17486 5672 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 27.207 3 0.015140289500990224 0.007961964557883483 0.056330547131264064 ['ENSG00000162378|ENST00000294353|ZYG11B'] 24030 14896 EYNKSWQTF True PC9_epitope_Rep5 1201.5403880001697 1201.53928993586 62.301 2 0.015135588101493794 0.007961964557883483 0.056335541207963545 ['ENSG00000198440|ENST00000333201|ZNF583'] 1968 9014 AEIPEEHIP True H1975_Epitope_Rep3 1033.50802524273 1033.5069299358602 39.669 2 0.01513488528304023 0.007961964557883483 0.05633628781010747 ['ENSG00000198218|ENST00000395443|QRICH1'] 61737 18105 LLAESVTEV True PC9_epitope_Rep3 959.5175272972699 959.51642993586 74.836 2 0.015134850684592463 0.007961964557883483 0.05633632456415319 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 78249 17808 NYGRVFSEW True PC9_epitope_Rep4 1156.53015766964 1156.5290699358602 76.531 2 0.015121355806286289 0.007961964557883483 0.056350661707709526 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 134617 13201 VYSNSIYEL True NCI_RA007_Epitope_Rep3 1086.5233409537 1086.52277496793 59.196 1 0.015116705722789628 0.007961964557883483 0.0563556027085447 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 114829 7746 TQLQTTQSV True PC9_epitope_Rep2 1004.5138388991599 1004.51274993586 35.17 2 0.015114141459315422 0.007961964557883483 0.056358327547766165 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 116418 14300 TTISRFEAL True PC9_epitope_Rep4 1036.5553097883198 1036.5542099358602 62.905 2 0.015101607048423624 0.007961964557883483 0.056371648415460364 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000028277|P09086-4|POU2F2', 'POU2F3|p.Q226H|1|0.18|ENSG00000137709|chr11:120305694-120305694|G/T|missense_variant', 'ENST00000559648.1_1_1:167358914-167365774:+|nuORF', 'nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'ENST00000533620.5_1_11:120169092-120189098:+|nuORF'] 107709 6718 SVSDGIHSV True PC9_epitope_Rep2 899.4348603024702 899.43376993586 31.252 2 0.015094567791786183 0.007961964557883483 0.05637913046634322 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 69539 22295 LVDDNYFYL True PC9_epitope_Rep2 1160.5389910178399 1160.5378899358602 91.235 2 0.01507861490262271 0.007961964557883483 0.05639608984244801 ['ENSG00000174231|ENST00000304992|PRPF8'] 77679 22907 NTIEHLLPLFL True PC9_epitope_Rep2 1308.7441731871597 1308.7430699358601 93.618 2 0.015073187283112122 0.007961964557883483 0.056401860844168705 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF'] 40585 9006 HRGTGLVL True PC9_epitope_Rep5 851.49773534255 851.49662993586 39.587 2 0.015072870394070135 0.007961964557883483 0.05640219779628039 ['ENSG00000099812|ENST00000215582|MISP'] 120360 5725 VEEGAPPPP True H1975_Epitope_Rep3 891.4337976733099 891.43324496793 27.05 1 0.015062592641290881 0.007961964557883483 0.056413127149189585 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 11960 11928 DHNGMLSV True PC9_epitope_Rep3 871.38580193507 871.38470993586 50.902 2 0.015059135781798166 0.007961964557883483 0.056416803557997136 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 117607 20691 TVTDSMFAV True PC9_epitope_Rep1 969.4477334852899 969.4471849679301 84.412 1 0.015054109188548414 0.007961964557883483 0.05642214974437152 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 6853 16712 AQGGVLPNI True PC9_epitope_Rep6 867.48141657207 867.48030993586 76.757 2 0.01503410080655185 0.007984168145216323 0.05644343435818947 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 77507 14076 NTDFGDEFY True H1975_Epitope_Rep3 1106.4192698079798 1106.41867496793 59.469 1 0.015016884838323431 0.007984168145216323 0.056461753677348715 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 125432 11541 VITIMQNPR True PC9_epitope_Rep5 1070.5906497512199 1070.58954993586 49.39 2 0.015014230350754268 0.007984168145216323 0.05646457871861006 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 96068 12815 RYLTVAAVF True NCI_RA007_Epitope_Rep3 1038.5862159937797 1038.5851099358601 57.651 2 0.014987189283026468 0.008002910149145144 0.05649336376257347 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 49285 7719 KEQRISGLLVA True H1975_Epitope_Rep2 1212.71902106848 1212.7173749037902 34.643 3 0.014977114874540237 0.008002910149145144 0.05650409096037248 ['ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 44515 20118 ILLPRIIEA True PC9_epitope_Rep2 1036.6644663144798 1036.6633699358601 82.792 2 0.014964010082373209 0.008002910149145144 0.05651804738254403 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 9601 12205 AYAGSGNVL True PC9_epitope_Rep5 850.41848196234 850.41793496793 51.932 1 0.014958374577734173 0.008002910149145144 0.05652404997980159 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 4674 17001 ALAPGLPTA True PC9_epitope_Rep5 809.46470387877 809.46360993586 70.413 2 0.014955411021621552 0.008002910149145144 0.05652720678799542 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 115069 5852 TRDEDHIAL True PC9_epitope_Rep6 1068.51998690876 1068.5188899358602 30.735 2 0.014941492923335674 0.008002910149145144 0.056542034398749046 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 73402 22386 M[Oxidation]TLLLLPLL True PC9_epitope_Rep6 1041.65079077673 1041.6496899358601 99.077 2 0.014939564385536898 0.008002910149145144 0.05654408921134051 ['ENSG00000139182|ENST00000266546|CLSTN3'] 87003 18365 QMISRIEYI True PC9_epitope_Rep3 1151.60088008175 1151.5997899358601 75.852 2 0.014930087076982594 0.008002910149145144 0.05655418794864286 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 62370 18925 LLGPPPVGV True PC9_epitope_Rep4 847.51673945163 847.51564993586 80.881 2 0.014927307514209438 0.008002910149145144 0.056557150046253356 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 72800 19533 MPFGNVVSA True PC9_epitope_Rep2 920.4425885351999 920.44148993586 80.517 2 0.014923524860157251 0.008002910149145144 0.05656118131136371 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 55017 8443 KYQPPPPP True PC9_epitope_Rep1 922.4912529797798 922.49014993586 37.313 2 0.014913299550305457 0.008002910149145144 0.05657207983993315 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 35433 8349 GSGERQETLL True PC9_epitope_Rep4 1088.5462016565998 1088.5451099358602 39.572 2 0.014904486692894547 0.008002910149145144 0.05658147429377623 ['ENST00000593411.1_1_19:17213013-17214246:+|nuORF'] 128685 7513 VPVSLKEA True PC9_epitope_Rep2 841.49091862661 841.48982993586 34.267 2 0.01488365059143559 0.008002910149145144 0.05660369050474972 ['ENSG00000115306|ENST00000356805|SPTBN1'] 35129 17086 GQWASVIRV True PC9_epitope_Rep4 1014.5610638750999 1014.55996993586 73.719 2 0.01486467645609614 0.008002910149145144 0.056623927595372214 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 125047 7057 VIDPGFAK True NCI_RA007_Epitope_Rep4 845.46470387877 845.46360993586 33.769 2 0.014852303814137591 0.008002910149145144 0.0566371269558391 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 71774 5011 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 24.357 2 0.01483993574415806 0.008002910149145144 0.05665032394130725 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 33120 9605 GISDVFAK True NCI_RA007_Epitope_Rep1 835.44396843419 835.44286993586 41.359 2 0.014828638060885467 0.008002910149145144 0.056662380988908516 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 117182 9883 TVLERVEGA True PC9_epitope_Rep2 972.5240096600398 972.52290993586 43.348 2 0.014825206366914692 0.008002910149145144 0.056666043754770995 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 34669 20198 GQDGLYIGV True PC9_epitope_Rep1 920.4603467743199 920.45924993586 82.52 2 0.014817425762467378 0.008002910149145144 0.056674348977071326 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 39937 16861 HPIEPVLITA True PC9_epitope_Rep3 1088.62299542532 1088.62188993586 70.009 2 0.014807177351661281 0.008002910149145144 0.05668528991246156 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 62503 21713 LLIPGLATA True PC9_epitope_Rep3 867.54295419947 867.54184993586 88.813 2 0.014798368799536365 0.008002910149145144 0.0566946950657156 ['ENSG00000125356|ENST00000371437|NDUFA1'] 56135 12637 LAVHPSGVAL True PC9_epitope_Rep4 962.5549158654999 962.55380993586 56.448 2 0.014797151621201482 0.008002910149145144 0.05669599478309053 ['ENSG00000187608|ENST00000649529|ISG15'] 31780 14457 GEIDYEAIV True H1975_Epitope_Rep1 1007.48114178855 1007.48057496793 60.806 1 0.014787270646865304 0.008019628779789626 0.05670654670123409 ['ENSG00000100519|ENST00000445930|PSMC6'] 113691 17330 TLYERGFENI True PC9_epitope_Rep1 1240.6088019131598 1240.6077099358602 71.474 2 0.014776174803645261 0.008019628779789626 0.05671839788558192 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 18342 9172 EITALAPS True H1975_Epitope_Rep3 800.42798401688 800.42743496793 40.27 1 0.014773298145514282 0.008019628779789626 0.05672147069895634 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 36079 23662 GVAEFFEFV True PC9_epitope_Rep2 1043.49639792987 1043.4953099358602 96.488 2 0.014769387074343273 0.008019628779789626 0.05672564867778524 ['ENSG00000131697|ENST00000378156|NPHP4', 'ENST00000489180.6_1_1:5923327-5936049:-|nuORF', 'NPHP4|p.K996T|1|0.34|ENSG00000131697|chr1:5874931-5874931|T/G|missense_variant'] 11853 13635 DHHENKYLLL True PC9_epitope_Rep5 1280.65133543148 1280.6496749037901 57.47 3 0.014765921864450606 0.008019628779789626 0.05672935057710356 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 85850 19694 QHFDAAYIF True PC9_epitope_Rep2 1110.5134449763398 1110.5123499358601 81.139 2 0.014765120575770665 0.008019628779789626 0.056730206625384236 ['ENSG00000023608|ENST00000216294|SNAPC1'] 99679 17518 SIGRQGLIYL True PC9_epitope_Rep5 1118.64479349906 1118.64368993586 72.388 2 0.014764367300411783 0.008019628779789626 0.05673101138872541 ['ENSG00000179148|ENST00000448843|ALOXE3', 'nc|ENSG00000179148|Q9BYJ1-2|ALOXE3'] 71734 10214 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42717496793 44.334 1 0.01475927866285096 0.008019628779789626 0.05673644808884973 ['ENSG00000026025|ENST00000544301|VIM'] 17306 13760 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 64.727 2 0.014750691755319071 0.008019628779789626 0.05674562330157733 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 100395 12192 SKVSILESL True NCI_RA007_Epitope_Rep5 974.56481184286 974.56370993586 53.551 2 0.014715225834830554 0.008019628779789626 0.05678353184837704 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 117026 7331 TVIAKVNNV True PC9_epitope_Rep2 956.5654805492 956.56438993586 33.58 2 0.014706916366729992 0.008019628779789626 0.05679241658829334 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 90536 8232 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64349490379 39.516 3 0.0146963137708229 0.008019628779789626 0.05680375485317612 ['ENSG00000127540|ENST00000591899|UQCR11'] 104015 16422 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42922496793 68.168 1 0.014663661375933862 0.008019628779789626 0.056838684425380384 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 8882 14539 AVFPSIVG True H1975_Epitope_Rep2 788.4432401582 788.44269496793 61.081 1 0.014655612495083629 0.008019628779789626 0.05684729731827813 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 131456 16969 VTITGIVKV True PC9_epitope_Rep2 928.59571804832 928.59462993586 70.518 2 0.01465249961107495 0.008019628779789626 0.056850628617121826 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 130910 8445 VTDEGQLY True H1975_Epitope_Rep2 923.4236269124299 923.42307496793 37.435 1 0.014643918493472127 0.008019628779789626 0.05685981264905486 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 28594 14157 FSGPAITL True H1975_Epitope_Rep1 804.43815477776 804.43760496793 59.63 1 0.01461577280542582 0.008019628779789626 0.05688994433877611 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 32889 6979 GHSGPITSI True PC9_epitope_Rep6 867.4450310633501 867.44392993586 35.813 2 0.0146148109427583 0.008019628779789626 0.05689097430131648 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 107472 19232 SVMETFLLY True NCI_RA007_Epitope_Rep4 1101.5416338701298 1101.5405299358601 83.15 2 0.014603181687801182 0.008019628779789626 0.05690342810741764 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'nc|ENSG00000142733|O95382-2|MAP3K6'] 109869 6602 TEETATTVVA True H1975_Epitope_Rep2 1020.4975201286799 1020.4969749679301 30.305 1 0.014599908226007867 0.008019628779789626 0.05690693406785177 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 40869 15218 HSEVVAIL True PC9_epitope_Rep1 866.4861675993399 866.48506993586 63.356 2 0.014593475651099674 0.008019628779789626 0.056913824030092305 ['ENSG00000092148|ENST00000399332|HECTD1'] 194 6023 AAETTLTELRR True H1975_Epitope_Rep3 1259.68336383575 1259.68171490379 28.181 3 0.014587008502517674 0.008019628779789626 0.05692075170812108 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 31822 10036 GEIPKVLVA True NCI_RA007_Epitope_Rep5 924.5644179200399 924.56332993586 45.242 2 0.014582263172929873 0.008019628779789626 0.05692583539152725 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 126548 21147 VLLNEILEQV True PC9_epitope_Rep6 1168.67033954056 1168.66924993586 94.188 2 0.014552089890299059 0.008019628779789626 0.05695816874132499 ['ENSG00000109805|ENST00000251496|NCAPG'] 35705 21589 GTFDIFYTA True PC9_epitope_Rep4 1033.4756624852898 1033.47456993586 91.224 2 0.014531006629901762 0.008019628779789626 0.056980770185759116 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 41536 17995 HYPPVQVLF True PC9_epitope_Rep6 1098.58621599378 1098.5851099358601 81.846 2 0.01450834831456903 0.008019628779789626 0.0570050682308315 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 31542 9111 GEDPTSVAIA True H1975_Epitope_Rep2 958.46074069714 958.4601949679301 39.998 1 0.01450475099199787 0.008019628779789626 0.05700892665793651 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 122143 11825 VGAGAPVYLAA True H1975_Epitope_Rep1 987.5389314481899 987.53782993586 50.48 2 0.014500738411056466 0.008019628779789626 0.05701323073457813 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 68550 5085 LTGPPGVGK True NCI_RA007_Epitope_Rep4 824.4756029156399 824.4745099358599 26.068 2 0.014471721759894057 0.008019628779789626 0.05704436317494867 ['ENSG00000135778|ENST00000366628|NTPCR'] 90604 13711 REMIPFAVV True NCI_RA007_Epitope_Rep3 1060.57393705792 1060.57282993586 61.254 2 0.014458444153119107 0.008019628779789626 0.05705861354397619 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 47708 21710 IYAPPLPSL True PC9_epitope_Rep1 969.55351888317 969.55242993586 88.34 2 0.014449063217902713 0.008019628779789626 0.057068683502271664 ['ENSG00000121057|ENST00000337714|AKAP1'] 131755 20830 VTPPGFQLV True PC9_epitope_Rep2 956.53311779176 956.53202993586 85.566 2 0.014445340452328244 0.008019628779789626 0.057072680102659167 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 114537 16210 TQAPPNVVL True PC9_epitope_Rep1 937.5232813840499 937.52218993586 67.169 2 0.014435425798197248 0.008019628779789626 0.05708332515687058 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 89138 11382 QVRDVIIAA True PC9_epitope_Rep2 983.5763795860698 983.5758349679301 49.103 1 0.014364810954074648 0.008040520589638176 0.057159188785801326 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 96468 8566 SAAM[Oxidation]PGASL True PC9_epitope_Rep5 819.37965430591 819.37854993586 37.891 2 0.014347908558123108 0.008040520589638176 0.05717735967861384 ['ENSG00000086062|ENST00000379731|B4GALT1'] 40392 4225 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 22.79 2 0.014314932597839473 0.008040520589638176 0.05721282393964351 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1'] 87928 16496 QRLDLQIKL True PC9_epitope_Rep2 1125.68699266421 1125.6853349037901 68.693 3 0.014314494477730757 0.008040520589638176 0.057213295239686754 ['nc|ENSG00000140280|Q8IV50-2|LYSMD2', 'ENSG00000140280|ENST00000267838|LYSMD2'] 65159 12766 LQPERYELW True NCI_RA007_Epitope_Rep4 1232.61897267404 1232.6178699358602 56.164 2 0.014305720692057442 0.008040520589638176 0.05722273415016634 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'nc|ENSG00000127663|O94953-2|KDM4B', 'KDM4B-AKAP8L|1|fusion'] 5096 14774 ALLGDLTKA True PC9_epitope_Rep4 900.52803241132 900.52692993586 64.76 2 0.014298878194476068 0.008040520589638176 0.057230096243016726 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 32596 13745 GGHGPSFPL True PC9_epitope_Rep5 867.42390169595 867.42280993586 57.892 2 0.014296515827645928 0.008040520589638176 0.05723263817836707 ['ENSG00000079246|ENST00000392132|XRCC5'] 90193 3808 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 19.664 2 0.014291940929860077 0.008040520589638176 0.05723756108462715 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 112444 16099 TLDDMISYY True H1975_Epitope_Rep2 1119.4794275363902 1119.47832993586 67.135 2 0.014288498525456569 0.008040520589638176 0.05724126557650219 ['ENSG00000154781|ENST00000383794|CCDC174'] 9696 15383 AYGGPVGAGI True PC9_epitope_Rep1 860.4392174069199 860.4386649679301 63.989 1 0.014274695623987166 0.008040520589638176 0.05725612131797335 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 65321 6350 LRDEHNYTL True PC9_epitope_Rep4 1159.56218607391 1159.56055490379 31.502 3 0.014246100246078822 0.008057743377896815 0.05728690782151921 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 40575 8978 HRGTGLVL True PC9_epitope_Rep1 851.49773534255 851.49662993586 39.379 2 0.014217273696655038 0.008057743377896815 0.05731795681678512 ['ENSG00000099812|ENST00000215582|MISP'] 32227 13754 GEYGNLVTI True NCI_RA007_Epitope_Rep4 964.48656152216 964.48601496793 60.132 1 0.01420778367640084 0.008057743377896815 0.05732818148051407 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 59081 16250 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46963496793 67.715 1 0.014205375150955574 0.008057743377896815 0.05733077669088963 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 11769 9928 DHDIPQQL True PC9_epitope_Rep6 964.46140940348 964.46030993586 48.706 2 0.01418363382905029 0.008057743377896815 0.05735420750146704 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 111498 16134 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62789490379 69.999 3 0.014170763966872432 0.008057743377896815 0.05736808112662639 ['ENSG00000076003|ENST00000264156|MCM6'] 24693 20608 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.54184993586 85.363 2 0.014162309870672919 0.008057743377896815 0.057377196068466516 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 106182 4532 STDPSVLGK True NCI_RA007_Epitope_Rep3 902.4709114580199 902.46980993586 24.695 2 0.01415949468835396 0.008057743377896815 0.05738023157086906 ['ENSG00000114315|ENST00000232424|HES1'] 91818 4021 RKISGTTAL True NCI_RA007_Epitope_Rep4 945.5607295219299 945.55962993586 21.724 2 0.014151490277773793 0.008057743377896815 0.057388863130183716 ['CLIP1-KNTC1|1|fusion', 'ENST00000541410.1_1_12:122839622-122839970:-|nuORF', 'nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 61142 8198 LIIYSRNQ True NCI_RA007_Epitope_Rep5 1005.5607295219299 1005.55962993586 38.213 2 0.014135444427177086 0.008057743377896815 0.05740616935432531 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 87479 8033 QQDPQQYNV True PC9_epitope_Rep6 1118.49925146418 1118.49814993586 40.382 2 0.014120068655435103 0.008057743377896815 0.05742275684118599 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 31644 10782 GEFQSFSSA True NCI_RA007_Epitope_Rep1 958.4032258210199 958.40212993586 45.935 2 0.01411871555909607 0.008057743377896815 0.05742421675695456 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 103971 15177 SQAPEAWRL True PC9_epitope_Rep5 1056.53524305008 1056.5341499358601 63.386 2 0.014117083787968984 0.008057743377896815 0.05742597738741574 ['ENSG00000168936|ENST00000382936|TMEM129', 'nc|ENSG00000168936|A0AVI4-2|TMEM129'] 132189 11338 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 50.261 2 0.014112770541230717 0.008057743377896815 0.05743063145794915 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 119524 9193 VASGSAVVL True H1975_Epitope_Rep2 801.45961849833 801.4590749679301 40.314 1 0.014107098273655114 0.008057743377896815 0.057436752402438986 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 7233 22375 ARDEIIWLL True PC9_epitope_Rep1 1127.63389446219 1127.63337496793 90.881 1 0.014102838295894043 0.008057743377896815 0.05744134969306152 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 122141 11669 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.4641549679301 50.021 1 0.01408060264059819 0.008057743377896815 0.057465350857321566 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 5276 5548 ALQASALK True PC9_epitope_Rep1 800.47560291564 800.4745099358599 26.17 2 0.014060710057358223 0.008057743377896815 0.0574868298081508 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 28017 19549 FQNPFRSEL True PC9_epitope_Rep1 1136.56145779792 1136.56036993586 80.02 2 0.014056276459457666 0.008057743377896815 0.05749161785869485 ['ENSG00000073050|ENST00000262887|XRCC1'] 5846 19415 APFLASAVSA True PC9_epitope_Rep1 932.4967322830399 932.49562993586 79.49 2 0.014051893933290887 0.008057743377896815 0.05749635107258214 ['ENSG00000146242|ENST00000369750|TPBG'] 40476 7539 HRDGEFQEL True PC9_epitope_Rep2 1129.51523588149 1129.51360490379 34.365 3 0.014047176013857446 0.008057743377896815 0.05750144687125902 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 4671 17178 ALAPGLPTA True PC9_epitope_Rep1 809.46470387877 809.46360993586 70.896 2 0.014045077380686041 0.008057743377896815 0.05750371371112435 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 25360 8800 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.47562993586 38.815 2 0.01404405230360018 0.008057743377896815 0.05750482097511247 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 122404 13204 VGDPSVHLL True PC9_epitope_Rep6 935.5076313199099 935.50652993586 62.438 2 0.01403773820128953 0.008057743377896815 0.05751164170044746 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 108120 18641 SYDPDFNQL True PC9_epitope_Rep4 1097.46655435357 1097.46544993586 79.78 2 0.014032740619513782 0.008057743377896815 0.05751704073742742 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 141233 9761 YTDAALNY True H1975_Epitope_Rep3 929.41306222873 929.41196993586 42.568 2 0.014018024675353544 0.008057743377896815 0.05753294120081349 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 66598 13846 LSISETYDLK True PC9_epitope_Rep6 1167.6023195503901 1167.6012299358601 65.072 2 0.014013422961854816 0.008057743377896815 0.05753791404861445 ['CON__P34955'] 6410 7914 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 35.421 2 0.01400086469858259 0.008057743377896815 0.05755148692742186 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 69883 22365 LVIGQFLEA True PC9_epitope_Rep1 988.5593325395998 988.55822993586 90.844 2 0.013994778027524602 0.008057743377896815 0.05755806629161346 ['ENST00000596386.1_1_19:40477100-40485896:+|nuORF', 'ENST00000593455.5_1_19:40477100-40486089:+|nuORF', 'nc|ENSG00000013275|P43686-2|PSMC4', 'ENSG00000013275|ENST00000157812|PSMC4', 'ENST00000601697.5_1_19:40477100-40486546:+|nuORF'] 133354 20941 VVVGDLVEV True PC9_epitope_Rep1 927.5276980581499 927.5271449679301 85.37 1 0.013975670773636428 0.008057743377896815 0.05757872417139962 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 58893 6524 LETAVGAA True H1975_Epitope_Rep2 730.3861192049 730.3855749679301 30.008 1 0.013958094318822866 0.008080257841935631 0.05759773233406503 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 80381 8775 PGHLQEGFG True PC9_epitope_Rep3 940.4402800360799 940.43918993586 38.706 2 0.013940455767992911 0.008097074166477659 0.057616812769035367 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 31544 9273 GEDPTSVAIA True H1975_Epitope_Rep3 958.46074069714 958.4601949679301 40.663 1 0.013932123124844192 0.008097074166477659 0.05762582835734463 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 21113 18032 ERADPLFL True PC9_epitope_Rep2 959.5076313199099 959.50652993586 74.665 2 0.013910942964137191 0.008097074166477659 0.05764874960040795 ['ENSG00000198060|ENST00000358935|MARCHF5'] 39905 19135 HPFGFVAV True PC9_epitope_Rep3 872.4544735482399 872.45336993586 78.823 2 0.013910465275863253 0.008097074166477659 0.057649266641584616 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 72574 24367 MLPLLAALL True PC9_epitope_Rep3 953.5983609006099 953.59781496793 99.042 1 0.013906352753486827 0.008097074166477659 0.05765371811728283 ['ENSG00000249992|ENST00000503771|TMEM158'] 49461 9323 KEYILVEEA True NCI_RA007_Epitope_Rep3 1092.5702911461199 1092.56918993586 43.77 2 0.013900063556501887 0.008097074166477659 0.05766052620798415 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2', 'ENST00000478055.1_1_5:131553347-131562829:-|nuORF'] 4093 7852 AHQQSIPAV True PC9_epitope_Rep5 949.4981292653698 949.49702993586 35.145 2 0.013874111846518268 0.008097074166477659 0.057688625976473305 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 54338 15588 KYEELFPAF True NCI_RA007_Epitope_Rep1 1142.5648118428596 1142.56370993586 64.721 2 0.013870759942861086 0.008097074166477659 0.057692256131647066 ['ENSG00000105402|ENST00000263354|NAPA'] 96071 13425 RYLTVAAVF True NCI_RA007_Epitope_Rep5 1038.5862159937797 1038.5851099358601 58.325 2 0.013870698002524523 0.008097074166477659 0.05769232321557928 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 117027 7422 TVIAKVNNV True PC9_epitope_Rep2 956.5654805492 956.56438993586 33.924 2 0.013868758703609898 0.008097074166477659 0.05769442358807341 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 44648 7407 ILSGVVTK True PC9_epitope_Rep2 815.51165407119 815.51054993586 33.869 2 0.01386551219314896 0.008097074166477659 0.05769793988484228 ['ENSG00000142534|ENST00000270625|RPS11'] 87809 6263 QREAEQSNVAL True PC9_epitope_Rep2 1243.61567819875 1243.61458993586 29.489 2 0.013843302881364452 0.008097074166477659 0.05772199946160964 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 26183 14511 FHDGDSVVF True PC9_epitope_Rep2 1021.4505103666099 1021.44940993586 61.087 2 0.013836960643207628 0.008097074166477659 0.05772887156714961 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 4816 4912 ALEENNNFSK True NCI_RA007_Epitope_Rep1 1164.54111627616 1164.54000993586 23.187 2 0.013835686693706155 0.008097074166477659 0.057730252029814876 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2'] 40578 6624 HRGTGLVL True PC9_epitope_Rep2 851.49773534255 851.49662993586 30.89 2 0.013829506254059322 0.008097074166477659 0.057736949587530235 ['ENSG00000099812|ENST00000215582|MISP'] 37533 20614 GVVFSVTTV True PC9_epitope_Rep5 907.5014833103099 907.50038993586 84.34 2 0.013819019439004477 0.008097074166477659 0.057748315277354564 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENST00000489758.1_1_1:25072044-25124343:+|nuORF'] 47248 13276 IVCDVPSASA True PC9_epitope_Rep4 960.45863252216 960.45752993586 58.962 2 0.013788560992082824 0.008097074166477659 0.05778133666229582 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 97911 4205 SEMRAPPAA True NCI_RA007_Epitope_Rep4 928.4436511643598 928.44254993586 22.484 2 0.013778006915867754 0.008097074166477659 0.057792782386915036 ['ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF'] 89545 16616 QYLRVETQF True PC9_epitope_Rep1 1182.6033226099 1182.6022299358601 68.74 2 0.013770385582425042 0.008097074166477659 0.057801048742633976 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant'] 68753 6058 LTLEERGDQG True NCI_RA007_Epitope_Rep1 1116.5411162761598 1116.54000993586 27.603 2 0.01376858894395587 0.008097074166477659 0.05780299757705396 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 78057 7287 NVTTEVKSV True PC9_epitope_Rep5 975.5236753068699 975.52256993586 32.994 2 0.01375605012606111 0.008097074166477659 0.05781660006061009 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 125032 6617 VIDDTNITR True PC9_epitope_Rep4 1045.5403880001702 1045.53928993586 32.612 2 0.013751313925939106 0.008097074166477659 0.05782173870703074 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 96856 6431 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42883496793 29.711 1 0.013726285059563215 0.008097074166477659 0.05784890048585818 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 87011 13688 QMISRIEYV True PC9_epitope_Rep6 1137.58523001761 1137.5841299358601 64.436 2 0.013713382904482388 0.008097074166477659 0.05786290617830291 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 29642 18287 FVIRNIVEA True PC9_epitope_Rep5 1059.6076797143498 1059.60658993586 75.355 2 0.013708693634931973 0.008097074166477659 0.05786799720799834 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 58877 9721 LETAEEAVT True H1975_Epitope_Rep2 961.4604063439699 961.45985496793 42.378 1 0.013705576885181996 0.008097074166477659 0.057871381190808535 ['ENSG00000225190|ENST00000430334|PLEKHM1', 'ENST00000582201.5_1_17:62781409-62811241:-|nuORF', 'ENST00000582035.1_1_17:43530658-43531768:-|nuORF'] 141213 13206 YTAEGEINNV True PC9_epitope_Rep1 1108.50366813828 1108.50256993586 55.66 2 0.013705309729925681 0.008097074166477659 0.05787167125967298 ['nc|ENSG00000136485|P61962-2|DCAF7', 'ENSG00000136485|ENST00000614556|DCAF7'] 30665 6428 GALALEEK True PC9_epitope_Rep2 829.4545331178899 829.45342993586 30.134 2 0.01369940172552648 0.008097074166477659 0.057878086288269445 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 20713 20358 EQELIYFTF True NCI_RA007_Epitope_Rep5 1188.57029114612 1188.56918993586 85.244 2 0.013694336479100407 0.008097074166477659 0.05788358669248914 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5'] 116413 5748 TTISKVSQV True PC9_epitope_Rep4 961.5444107514498 961.54330993586 28.942 2 0.013691798628131288 0.008097074166477659 0.05788634273081628 ['ENSG00000065183|ENST00000349139|WDR3'] 7235 22296 ARDEIIWLL True PC9_epitope_Rep3 1127.63389446219 1127.63337496793 91.046 1 0.013686858589925575 0.008097074166477659 0.057891707785351985 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 120158 3220 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 16.948 2 0.013684629725098275 0.008097074166477659 0.057894128542587596 ['ENSG00000155506|ENST00000518297|LARP1'] 96540 20923 SADTTILFV True PC9_epitope_Rep4 965.50696261357 965.50641496793 88.639 1 0.013674766886474822 0.008118282008254343 0.05790484149968173 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 295 16870 AAGTVFTTV True PC9_epitope_Rep5 865.4545331178899 865.45342993586 69.901 2 0.0136739464182083 0.008118282008254343 0.05790573275986395 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 40589 5977 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 31.306 2 0.013673385188549724 0.008118282008254343 0.05790634242013128 ['ENSG00000099812|ENST00000215582|MISP'] 37322 18035 GVSDVDYSL True PC9_epitope_Rep3 953.43419159613 953.43364496793 74.573 1 0.01365312720357801 0.008118282008254343 0.05792835202614763 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 17338 17799 EHASSLLEL True PC9_epitope_Rep3 997.5080252427299 997.50692993586 73.663 2 0.013650269754953008 0.008118282008254343 0.05793145709170851 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 30151 18586 FYPPHPDYTW True PC9_epitope_Rep4 1321.5767735088898 1321.57566993586 79.567 2 0.013635568513643148 0.008118282008254343 0.05794743442592735 ['ENSG00000130309|ENST00000252599|COLGALT1'] 100164 14106 SITSELHAV True PC9_epitope_Rep3 955.4974605590301 955.49636993586 59.344 2 0.013622823280686055 0.008118282008254343 0.05796128885706837 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 25657 7669 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.42114993586 34.45 2 0.01360624273166569 0.008118282008254343 0.057979316403766634 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 1308 5155 AEDRQVSITA True H1975_Epitope_Rep2 1088.5462016566 1088.5451099358602 24.906 2 0.013544635601381017 0.008131554508595892 0.05804633984944415 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 63332 20499 LLTEQINLYL True H1975_Epitope_Rep1 1218.6859896047 1218.6848899358602 85.256 2 0.013538436814563636 0.008131554508595892 0.05805308708987781 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2', 'ENSG00000116793|ENST00000369604|PHTF1'] 89178 17902 QVSEVFNTV True PC9_epitope_Rep5 1021.5080252427299 1021.50692993586 73.877 2 0.013524566963500947 0.008131554508595892 0.05806818641334317 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 35208 8886 GRANGLTI True PC9_epitope_Rep1 800.45045079696 800.44934993586 39.019 2 0.013519844877798606 0.008131554508595892 0.058073327807331585 ['ENSG00000070018|ENST00000261349|LRP6'] 17288 14520 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 63.766 2 0.013513110198088015 0.008131554508595892 0.05808066114625951 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 23883 16728 EYIRSLNQF True PC9_epitope_Rep3 1168.58767254576 1168.58656993586 69.483 2 0.013505883579802966 0.008131554508595892 0.0580885309875952 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 97485 11791 SEEILTVAA True H1975_Epitope_Rep2 931.4862271689899 931.48512993586 50.428 2 0.013471856602404415 0.008131554508595892 0.058125598231307196 ['ENSG00000204560|ENST00000376442|DHX16'] 6904 13782 AQIEVVPSA True PC9_epitope_Rep4 912.4916469025999 912.49109496793 60.909 1 0.01346777436688708 0.008131554508595892 0.05813004649623243 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 114366 20071 TPSIPVLTA True PC9_epitope_Rep2 897.51713337445 897.51602993586 82.609 2 0.01345115155486183 0.008131554508595892 0.05814816262304835 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 136808 19138 YAADNQIYI True PC9_epitope_Rep1 1069.50802524273 1069.5069299358602 78.406 2 0.013450036751332767 0.008131554508595892 0.05814937773886608 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 41063 6265 HTLNQIDSVK True PC9_epitope_Rep3 1153.6091362663299 1153.60750490379 29.134 3 0.013413938200279927 0.008131554508595892 0.05818873562771102 ['CON__P12763'] 24536 2853 FAGDDAPR True H1975_Epitope_Rep1 847.38243080679 847.38132993586 14.588 2 0.013366108456973435 0.008131554508595892 0.05824091714539594 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 71820 13972 MEIPTTIQC True H1975_Epitope_Rep1 1034.47765371458 1034.47654993586 58.901 2 0.013353525555150741 0.008131554508595892 0.058254651192421174 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 4153 8159 AHTAGVVL True PC9_epitope_Rep1 766.43373810366 766.43264993586 36.214 2 0.013339451751531974 0.008131554508595892 0.058270015642970345 ['ENSG00000183751|ENST00000568546|TBL3'] 65327 6014 LRDEHNYTL True PC9_epitope_Rep6 1159.56218607391 1159.56055490379 31.469 3 0.013333824560758606 0.008131554508595892 0.05827615979691766 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 30538 13788 GAGPSLLL True H1975_Epitope_Rep1 726.4275900940601 726.4270449679301 58.179 1 0.01331196591090795 0.008131554508595892 0.05830003155068061 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533865.5_1_11:88068232-88070840:-|nuORF', 'ENST00000534131.1_1_11:88068041-88070840:-|nuORF', 'nc|ENSG00000109861|P53634-2|CTSC', 'nc|ENSG00000109861|P53634-3|CTSC', 'ENST00000393301.4_1_11:88059607-88070840:-|nuORF', 'CTSC-RAB38|1|fusion', 'CTSC-RAB38|2|fusion'] 2862 11370 AEVEVSIPA True H1975_Epitope_Rep1 913.4756624852898 913.47511496793 48.714 1 0.013291811142690934 0.008131554508595892 0.05832204951589901 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 52878 11617 KPFGQVIST True PC9_epitope_Rep5 975.5389314481899 975.53782993586 49.68 2 0.01328649175819506 0.008131554508595892 0.05832786177077361 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 102214 12874 SLSDIEIY True H1975_Epitope_Rep3 938.4596780679799 938.45912496793 54.744 1 0.013267167654827402 0.008131554508595892 0.058348980305004045 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 54879 20136 KYPHYFPLL True PC9_epitope_Rep5 1176.6331661862 1176.63151490379 82.502 3 0.013266177371762979 0.008131554508595892 0.058350062712177575 ['ENSG00000172009|ENST00000307741|THOP1'] 40202 10673 HQGATPLVL True PC9_epitope_Rep6 934.5236157372199 934.52250993586 51.871 2 0.013259126996003252 0.008131554508595892 0.058357769440486436 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 87425 16091 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.46262993586 67.043 2 0.013257178625333732 0.008131554508595892 0.058359899339421144 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 118931 15503 VADPYVVIM True NCI_RA007_Epitope_Rep4 1005.5205045027299 1005.51997496793 67.33 1 0.013255094072082965 0.008131554508595892 0.05836217817864057 ['ENSG00000071894|ENST00000616140|CPSF1'] 1728 5531 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 26.324 2 0.013237581244331031 0.008131554508595892 0.05838132609353884 ['ENSG00000161847|ENST00000617231|RAVER1'] 32213 8721 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 38.506 1 0.013228565982794312 0.008131554508595892 0.05839118504829372 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 390 15823 AALDIYETL True NCI_RA007_Epitope_Rep4 1007.51752729727 1007.5169749679301 68.721 1 0.01321792049517023 0.008131554508595892 0.058402828528820526 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 37117 13496 GVPTKVFNV True PC9_epitope_Rep4 959.5440168286299 959.54290993586 59.809 2 0.0132142365529335 0.008131554508595892 0.05840685827080154 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 39955 9510 HPKYSDMIVA True PC9_epitope_Rep4 1159.56957995347 1159.56848993586 44.191 2 0.013189213912923364 0.008131554508595892 0.05843423566059581 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 6418 7915 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 35.386 2 0.01316582509633741 0.008131554508595892 0.05845983486540102 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 78626 10417 NYTARFSRF True PC9_epitope_Rep2 1160.57269118796 1160.5710449037902 45.391 3 0.013165096490616389 0.008131554508595892 0.05846063247460977 ['ENSG00000144231|ENST00000272645|POLR2D'] 21150 6663 ERAQGVVL True PC9_epitope_Rep6 870.4923156089399 870.49120993586 34.369 2 0.013161108618297893 0.008131554508595892 0.05846499817920449 ['ENSG00000136950|ENST00000353214|ARPC5L'] 45114 20792 IPLQDLVAA True PC9_epitope_Rep2 938.5436824754598 938.54258993586 85.418 2 0.013120894195665433 0.008131554508595892 0.05850903747514727 ['ENSG00000170892|ENST00000396388|TSEN34', 'TSEN34|p.D267Y|1|0.38|ENSG00000170892|chr19:54193228-54193228|G/T|missense_variant'] 2195 13856 AELYGPFTSA True H1975_Epitope_Rep3 1054.49712620586 1054.49657496793 58.605 1 0.013111927610336246 0.008131554508595892 0.0585188605485622 ['ENSG00000169217|ENST00000305596|CD2BP2'] 39907 17258 HPFGFVAV True PC9_epitope_Rep4 872.4544735482399 872.45336993586 74.389 2 0.01309404306167121 0.008131554508595892 0.058538457413647285 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 114773 5721 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.5496749679301 28.694 1 0.013092242704010732 0.008131554508595892 0.058540430436640645 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 103737 17666 SPVLPLTSA True PC9_epitope_Rep4 883.50148331031 883.50038993586 75.979 2 0.013089475704001242 0.008131554508595892 0.058543462913785274 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1'] 40870 14297 HSEVVAIL True PC9_epitope_Rep2 866.4861675993399 866.48506993586 60.259 2 0.013081187571668686 0.008131554508595892 0.05855254700334352 ['ENSG00000092148|ENST00000399332|HECTD1'] 105022 19741 SRDLSLLI True PC9_epitope_Rep5 915.5389314481899 915.53782993586 80.979 2 0.013077172608865236 0.008131554508595892 0.0585569479561713 ['ENSG00000242550|ENST00000238508|SERPINB10'] 41555 20428 HYSPIYLSF True PC9_epitope_Rep2 1125.5494961318898 1125.54838993586 84.004 2 0.01301981423181831 0.008131554508595892 0.058619849867233 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 105540 8390 SSATTSPFFK True NCI_RA007_Epitope_Rep5 1071.52367530687 1071.52256993586 38.948 2 0.013018963166490006 0.008131554508595892 0.058620783597043355 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 55571 6861 LAHAAFSAA True PC9_epitope_Rep2 857.43955176009 857.43844993586 31.794 2 0.012983427167789583 0.008131554508595892 0.05865978196628348 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 101268 20931 SLIADLEQL True PC9_epitope_Rep6 1000.5440763982799 1000.54296993586 93.284 2 0.01298298008474444 0.008131554508595892 0.058660272743472346 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 2913 7403 AEYINEAAA True NCI_RA007_Epitope_Rep3 950.4345259492999 950.43342993586 36.246 2 0.012974318586469394 0.008131554508595892 0.058669781399177126 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 49574 15497 KFRNEDIVP True PC9_epitope_Rep6 1116.5927579261997 1116.5916699358602 71.788 2 0.012963169215905781 0.008131554508595892 0.058682023093880306 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 48111 14231 IYNQVKQII True PC9_epitope_Rep2 1117.64954452633 1117.64844993586 60.006 2 0.012957674543932981 0.008131554508595892 0.05868805684858544 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 90879 4633 REVGSLGTSA True NCI_RA007_Epitope_Rep4 975.4985231881899 975.4974299358599 24.237 2 0.012957551498485553 0.008131554508595892 0.05868819197177457 ['ENSG00000185010|ENST00000360256|F8'] 29719 11014 FVMEVEVDGQK True NCI_RA007_Epitope_Rep1 1279.6118386882697 1279.6107499358602 46.837 2 0.012939324195777644 0.008131554508595892 0.05870821118617515 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 91038 6807 RFKTQPVTF True NCI_RA007_Epitope_Rep3 1122.6185787512197 1122.61748993586 33.88 2 0.012887577665041358 0.008131554508595892 0.05876507496540079 ['nc|nan|Q7Z7L8|C11orf96', 'ENSG00000187479|ENST00000617612|C11orf96'] 131758 20998 VTPPGFQLV True PC9_epitope_Rep5 956.53311779176 956.53202993586 85.831 2 0.012877240063504384 0.008131554508595892 0.058776440193373386 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 69279 18186 LTTNIMEIL True NCI_RA007_Epitope_Rep3 1046.56818297114 1046.5670899358602 79.652 2 0.012865748239032967 0.008131554508595892 0.058789076467113295 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 31607 8291 GEESPLETAA True H1975_Epitope_Rep3 1002.45056993626 1002.4499749679301 36.875 1 0.012797977374483724 0.008131554508595892 0.058863641170451106 ['ENSG00000111817|ENST00000644252|DSE'] 121297 5363 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44906993586 25.694 2 0.012767863938128097 0.008154020385050963 0.058896797910729506 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 110355 7706 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 34.603 1 0.012751104329106129 0.008170008600009052 0.058915257804020744 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 108075 10769 SYANVQDGF True NCI_RA007_Epitope_Rep5 999.4297749220299 999.42866993586 48.058 2 0.012747669076304955 0.008170008600009052 0.058919042144980026 ['ENSG00000152766|ENST00000371930|ANKRD22'] 115670 9914 TRYQIPKEV True PC9_epitope_Rep5 1132.6240580544797 1132.62241490379 43.106 3 0.012727418471607705 0.008170008600009052 0.05894135459459795 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 11054 15841 DAVLLLFANK True H1975_Epitope_Rep3 1102.6386454894598 1102.63754993586 66.38 2 0.012727004807132986 0.008170008600009052 0.05894181044806669 ['ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 32186 5616 GEVTNVTTA True NCI_RA007_Epitope_Rep4 890.4345259493 890.43397496793 28.203 1 0.012716204656362484 0.008170008600009052 0.05895371309737678 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 117725 18548 TVVAVVAGV True PC9_epitope_Rep1 813.4960040070499 813.49490993586 76.135 2 0.012715817091680123 0.008170008600009052 0.05895414026143896 ['ENSG00000105281|ENST00000542575|SLC1A5'] 11946 9843 DHMVSPTAV True PC9_epitope_Rep5 955.44331681119 955.44220993586 42.83 2 0.012694964876097434 0.008170008600009052 0.058977126736625744 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10'] 7669 7205 ASITALEAK True PC9_epitope_Rep6 902.50729696674 902.50618993586 36.803 2 0.01268926617734003 0.008170008600009052 0.05898340996643196 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 126291 5694 VLIAAHGNSLR True PC9_epitope_Rep6 1149.66184054553 1149.66019490379 30.03 3 0.012682042455346116 0.008170008600009052 0.058991375422423484 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 35141 16662 GQWIAETGV True PC9_epitope_Rep6 959.4712458111899 959.47014993586 76.56 2 0.012662158695988246 0.008170008600009052 0.05901330534010264 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 17467 17752 EHFDRILEM True PC9_epitope_Rep1 1188.5597435457598 1188.55810490379 73.08 3 0.012654543965321367 0.008170008600009052 0.05902170541591859 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 141530 13677 YTLREVDTV True PC9_epitope_Rep5 1094.5607890915799 1094.5596899358602 57.633 2 0.012645080869461828 0.008170008600009052 0.05903214583388705 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 40712 12604 HRTDLNPIL True PC9_epitope_Rep5 1077.59309227937 1077.59198993586 53.481 2 0.012632094084416057 0.008170008600009052 0.059046476285981454 ['ENST00000498316.3_1_7:28857752-28858893:+|nuORF', 'nc|ENSG00000146592|Q02930-4|CREB5', 'nc|ENSG00000146592|Q02930-3|CREB5', 'nc|ENSG00000146592|Q02930-2|CREB5', 'ENSG00000146592|ENST00000357727|CREB5'] 25203 14473 FDDPGLM[Oxidation]L True H1975_Epitope_Rep1 922.4106200810199 922.4100749679301 60.87 1 0.012631973534283622 0.008170008600009052 0.0590466093218948 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 98971 7523 SHDAAGAAVL True PC9_epitope_Rep3 910.45084471978 910.44974993586 33.938 2 0.012624216625261605 0.008170008600009052 0.059055170148921844 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 39237 16613 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58057496793 71.873 1 0.012619891579812484 0.008170008600009052 0.05905994387286029 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 99695 7298 SIHENFSQA True PC9_epitope_Rep3 1031.4672230599099 1031.4661299358602 33.078 2 0.012619520486963343 0.008170008600009052 0.05906035347725009 ['ENSG00000125633|ENST00000376300|CCDC93'] 21146 7321 ERAQGVVL True PC9_epitope_Rep2 870.4923156089399 870.49120993586 33.543 2 0.01260646636875856 0.008170008600009052 0.059074763795047 ['ENSG00000136950|ENST00000353214|ARPC5L'] 11864 16892 DHIHIIAL True PC9_epitope_Rep1 930.52870111766 930.52760993586 69.8 2 0.012601875583895049 0.008170008600009052 0.05907983219391997 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 89141 12521 QVRDVIIAA True PC9_epitope_Rep3 983.5763795860698 983.57528993586 53.187 2 0.012589505861593813 0.008170008600009052 0.05909349057971551 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 2710 7057 AETAAVTVAA True H1975_Epitope_Rep1 902.4709114580199 902.46980993586 32.177 2 0.012569682213557332 0.008170008600009052 0.0591153847501976 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 90796 5697 RESLASPVA True H1975_Epitope_Rep2 928.4977949121999 928.49668993586 26.91 2 0.012528214417176872 0.008170008600009052 0.059161204918790664 ['ENST00000373622.9_1_20:35807565-35812612:+|nuORF'] 39544 6742 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 34.729 2 0.012514237181113738 0.008170008600009052 0.059176655635705094 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 66380 12649 LSGHLETVIL True NCI_RA007_Epitope_Rep2 1080.61791004488 1080.6168099358601 53.814 2 0.012512367010054011 0.008170008600009052 0.059178723207359896 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 115406 13329 TRLPALTV True PC9_epitope_Rep6 869.5334521449299 869.53234993586 62.927 2 0.012510737764916543 0.008170008600009052 0.059180524470374155 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 89597 20172 QYPHWAVYV True PC9_epitope_Rep3 1161.56072952193 1161.5596299358601 82.848 2 0.012498210503885804 0.008170008600009052 0.05919437585493218 ['ENSG00000168672|ENST00000304916|LRATD2'] 111505 15294 THYDHVLIEL True PC9_epitope_Rep6 1238.6295373577398 1238.62844993586 70.946 2 0.012492125012312437 0.008170008600009052 0.059201105523511315 ['ENSG00000076003|ENST00000264156|MCM6'] 99830 24887 SILDVLTGI True PC9_epitope_Rep5 929.54334812229 929.54224993586 100.89 2 0.012480277094085402 0.008170008600009052 0.059214209369582035 ['ENSG00000163781|ENST00000260810|TOPBP1'] 125469 16789 VIVPLYDTL True NCI_RA007_Epitope_Rep3 1031.5902983147098 1031.58920993586 73.889 2 0.012478875370519515 0.008170008600009052 0.05921575983645992 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 97950 10529 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.46472993586 45.521 2 0.012477522664096628 0.008170008600009052 0.059217256115832874 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 62948 7486 LLPGELAK True H1975_Epitope_Rep3 839.5116540711899 839.51054993586 33.776 2 0.012476271342859573 0.008170008600009052 0.059218640276418134 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 39901 19034 HPFGFVAV True PC9_epitope_Rep1 872.4544735482399 872.45336993586 78.005 2 0.01246192198378281 0.008170008600009052 0.05923451481991025 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 30153 17494 FYPPHPDYTW True PC9_epitope_Rep6 1321.5767735088898 1321.57566993586 79.919 2 0.012461559769386229 0.008170008600009052 0.05923491557829126 ['ENSG00000130309|ENST00000252599|COLGALT1'] 93475 12041 RQIIAVVL True NCI_RA007_Epitope_Rep5 910.5963867546599 910.59528993586 52.975 2 0.012446084213717788 0.008170008600009052 0.05925203996421636 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 137891 8282 YEVQQVPKV True H1975_Epitope_Rep2 1088.5866099165999 1088.58550993586 36.807 2 0.012424934773913654 0.008170008600009052 0.05927544921495296 ['nc|ENSG00000174606|Q5VTE6-2|ANGEL2', 'ENSG00000174606|ENST00000366962|ANGEL2'] 93007 8666 RPKPSSSPVIF True PC9_epitope_Rep4 1213.68190728377 1213.68080993586 40.824 2 0.012387374906892186 0.008170008600009052 0.05931704073963024 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 103322 20616 SPLTSIISA True PC9_epitope_Rep3 887.49639792987 887.49530993586 84.568 2 0.012374105045145288 0.00819060117202525 0.05933174061041888 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 66965 4567 LSPDREGP True NCI_RA007_Epitope_Rep4 869.4242956187699 869.42318993586 23.968 2 0.01237055666835555 0.00819060117202525 0.05933567187139315 ['nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-12|ARHGAP33'] 99056 6677 SHGDVIRPL True PC9_epitope_Rep2 992.5403284305199 992.53922993586 31.091 2 0.01236782807740441 0.00819060117202525 0.05933869503127816 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 10038 18453 AYSAKIALF True PC9_epitope_Rep2 982.5487678558999 982.54766993586 76.311 2 0.012351889035200826 0.00819060117202525 0.05935635727913108 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 132315 20119 VTYGFPIML True H1975_Epitope_Rep2 1039.5412399473098 1039.5401499358602 83.376 2 0.012337072937178834 0.00819060117202525 0.05937277898257355 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF', 'CLCN7|p.N576I|1|0.15|ENSG00000103249|chr16:1449036-1449036|T/A|missense_variant'] 26510 12428 FIFSDTHEL True NCI_RA007_Epitope_Rep3 1107.52367530687 1107.52256993586 56.1 2 0.012334202314735896 0.00819060117202525 0.059375961115304715 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 38339 5717 HEIEGAHLP True NCI_RA007_Epitope_Rep3 1001.4930438849299 1001.49194993586 29.463 2 0.012325471533785258 0.00819060117202525 0.0593856401768885 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 97670 9106 SEHGLVVIA True NCI_RA007_Epitope_Rep4 923.5076313199099 923.50652993586 41.866 2 0.012324179583875185 0.00819060117202525 0.05938707255810713 ['ENSG00000139684|ENST00000378720|ESD'] 89878 9050 RAYAKFYTL True NCI_RA007_Epitope_Rep4 1131.60767971435 1131.60658993586 41.644 2 0.01231329957195388 0.00819060117202525 0.05939913630237675 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C', 'ENST00000380437.8_1_9:19290781-19335045:+|nuORF'] 106769 14473 SVAAQLTGV True PC9_epitope_Rep4 844.4654321547599 844.46432993586 63.581 2 0.012302083931490659 0.00819060117202525 0.05941157426050282 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 17157 11815 EGQLLAQV True NCI_RA007_Epitope_Rep4 856.4654321547599 856.4648849679301 52.427 1 0.01227056846904643 0.00819060117202525 0.059446535629237116 ['ENSG00000221890|ENST00000333039|NPTXR'] 37853 21302 GYMEGYYTF True PC9_epitope_Rep3 1129.44264810485 1129.44207496793 87.234 1 0.012265968325025007 0.008207841541174874 0.05945164014147707 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 119360 9137 VAPEEHPVLLT True NCI_RA007_Epitope_Rep4 1203.6499384491499 1203.6488499358602 41.985 2 0.012261793185544503 0.008207841541174874 0.05945627335694903 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 58229 10330 LELIGHAVA True H1975_Epitope_Rep2 921.52836676449 921.52726993586 44.743 2 0.012259161273635442 0.008207841541174874 0.05945919417908731 ['ENSG00000119922|ENST00000371826|IFIT2'] 61379 5934 LITEDVQGK True PC9_epitope_Rep6 1001.5393253710098 1001.53822993586 31.117 2 0.012237456633425096 0.008207841541174874 0.059483285793846374 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 76528 17134 NQINGSFAL True PC9_epitope_Rep6 962.48214484806 962.48104993586 78.491 2 0.012209374913021289 0.008207841541174874 0.059514467491675244 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 141179 15838 YSVETVTLL True H1975_Epitope_Rep2 1023.5488274255499 1023.54772993586 66.113 2 0.012200142276216379 0.008207841541174874 0.05952472221014016 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 89327 20752 QWPPDPPLHF True PC9_epitope_Rep2 1232.59784330664 1232.59674993586 85.263 2 0.012197526030208525 0.008207841541174874 0.05952762834181192 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 132545 9046 VVDSSNTAL True PC9_epitope_Rep1 904.45017601344 904.44906993586 39.647 2 0.012191100225594961 0.008207841541174874 0.05953476662496151 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000565309.1_1_16:88925068-88926212:+|nuORF', 'ENST00000565205.5_1_16:88925858-88927364:+|nuORF'] 107344 13650 SVLGKVNEI True PC9_epitope_Rep3 957.54949613189 957.54838993586 57.57 2 0.012189381301534283 0.008207841541174874 0.059536676256410695 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 42192 19825 IDRINLVI True PC9_epitope_Rep5 954.5862159937799 954.58510993586 81.303 2 0.012155859443458664 0.008207841541174874 0.0595739270983882 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 40375 3818 HQSRTVATL True NCI_RA007_Epitope_Rep4 1011.5461420869499 1011.54504993586 20.873 2 0.012151425662614932 0.008207841541174874 0.05957885550152126 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 47216 12168 IVAPGKGILAA True PC9_epitope_Rep6 1008.6331661861998 1008.63206993586 58.161 2 0.01214062786568095 0.008207841541174874 0.05959085925070461 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 86257 19999 QIPVKWIGV True PC9_epitope_Rep3 1038.6226015024997 1038.62150993586 82.171 2 0.012137951119639683 0.008207841541174874 0.059593835250779416 ['ENSG00000035687|ENST00000366535|ADSS2'] 5978 13121 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 55.474 2 0.012128365554755775 0.008207841541174874 0.05960449344257437 ['ENSG00000183856|ENST00000361170|IQGAP3'] 99326 12643 SHSPPLLQV True PC9_epitope_Rep4 976.53418042092 976.53308993586 56.471 2 0.012125835372084644 0.008207841541174874 0.05960730700961127 ['ENSG00000165030|ENST00000297689|NFIL3'] 120429 5103 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 24.708 2 0.012096229115174642 0.008207841541174874 0.05964023717001339 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 62365 19922 LLGPPPVGV True PC9_epitope_Rep1 847.51673945163 847.51564993586 81.448 2 0.012087021234590193 0.008207841541174874 0.05965048181142756 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 134490 10981 VYPTKTFPNL True NCI_RA007_Epitope_Rep4 1178.6335601090198 1178.6324699358602 49.107 2 0.012068610898702025 0.008207841541174874 0.059670969311528294 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 105845 11448 SSLPTQLFK True NCI_RA007_Epitope_Rep1 1019.5651461960299 1019.56404993586 48.494 2 0.012061059637650959 0.008207841541174874 0.059679374191119454 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 46983 6780 ITQGTPLKY True H1975_Epitope_Rep1 1019.5651461960299 1019.56404993586 31.123 2 0.012041684531550606 0.008207841541174874 0.05970094388585916 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 87287 13992 QPQLPYSQA True PC9_epitope_Rep3 1030.5083595959 1030.5072699358602 58.891 2 0.012030800412022296 0.008207841541174874 0.05971306358887351 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 134759 19237 VYTSVVEEL True PC9_epitope_Rep4 1037.5280919809697 1037.52757496793 82.095 1 0.012029713718929873 0.008207841541174874 0.059714273754049536 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 31845 7204 GEKALLVSA True H1975_Epitope_Rep3 886.5123823471799 886.51128993586 32.685 2 0.012026867609149587 0.008207841541174874 0.05971744333777335 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-6|USP48', 'ENST00000464577.1_1_1:22013654-22030763:-|nuORF'] 32590 13929 GGHGPSFPL True PC9_epitope_Rep1 867.42390169595 867.42280993586 58.413 2 0.012023084016848033 0.008207841541174874 0.05972165716330525 ['ENSG00000079246|ENST00000392132|XRCC5'] 1459 7619 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40140993586 34.287 2 0.012004655697472954 0.008207841541174874 0.059742184397405335 ['ENSG00000173545|ENST00000308683|ZNF622'] 6407 7634 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 34.36 2 0.012001748936035159 0.008207841541174874 0.0597454227468766 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 74606 21697 NGGLADIFTVF True H1975_Epitope_Rep1 1152.5815245361598 1152.5804299358601 90.153 2 0.011983146034487429 0.008207841541174874 0.059766151119029026 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000577191.5_1_17:7125289-7125622:+|nuORF'] 21761 11662 ERTSFNYAM True PC9_epitope_Rep4 1117.4862442523297 1117.4851499358601 52.619 2 0.011978152762770864 0.008207841541174874 0.05977171588231153 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 78700 6303 PAAAAAAAAAA True PC9_epitope_Rep2 825.4344663796498 825.43336993586 29.644 2 0.011957323215124075 0.008207841541174874 0.05979493392355167 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 25667 7554 FEQEMATAA True NCI_RA007_Epitope_Rep4 996.4222470134398 996.42114993586 35.704 2 0.011913643537239166 0.008252877201709363 0.05984364588176971 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 72010 6613 METAAAVAA True H1975_Epitope_Rep3 833.3953039896098 833.39420993586 30.389 2 0.011871443194430772 0.008273991183452017 0.059890738429952114 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 31540 5219 GEDPTAAAP True H1975_Epitope_Rep2 827.3661120363099 827.36556496793 25.142 1 0.01187006567459632 0.008273991183452017 0.05989227614597968 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 48073 21900 IYM[Oxidation]DTLNIF True PC9_epitope_Rep2 1144.547447907 1144.54634993586 89.714 2 0.011845585111258732 0.008273991183452017 0.059919608936979 ['ENSG00000165678|ENST00000372134|GHITM'] 7103 17020 AQVALVNEV True PC9_epitope_Rep1 941.51819600361 941.5176449679301 70.291 1 0.011827327838668944 0.008273991183452017 0.05993999990159555 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 53859 14790 KTIEDDLVSA True PC9_epitope_Rep1 1089.55536935797 1089.55477496793 61.709 1 0.011826631330870103 0.008273991183452017 0.05994077791955952 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 42407 5745 IEDINDHTP True H1975_Epitope_Rep2 1052.4774533904401 1052.47634993586 27.095 2 0.011816056348874431 0.008273991183452017 0.05995259145830108 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB5|p.D474Tfs*6|1|0.31|ENSG00000276547|chr5:141399546-141399546|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 37766 19282 GYADIVQLL True NCI_RA007_Epitope_Rep5 990.5385970950199 990.53750993586 81.039 2 0.011802448930329933 0.008273991183452017 0.05996779535527356 ['ENSG00000134996|ENST00000346234|OSTF1'] 48122 16419 IYPDSFTVL True NCI_RA007_Epitope_Rep3 1053.53826274185 1053.5371699358602 72.331 2 0.011792652541773202 0.008273991183452017 0.059978743018636066 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 38638 18539 HFIAEHYMF True PC9_epitope_Rep5 1193.53280052193 1193.53114490379 76.333 3 0.011783409008581835 0.008294910044299792 0.05998907433048865 ['ENSG00000143753|ENST00000323699|DEGS1', 'ENST00000498813.1_1_1:224377853-224378832:+|nuORF'] 105718 9034 SSEVIKDANLY True H1975_Epitope_Rep3 1237.6190322436898 1237.61792993586 39.744 2 0.011769620946517541 0.008294910044299792 0.06000448763395728 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 75328 17273 NIPGITLL True H1975_Epitope_Rep1 839.51165407119 839.51110496793 71.903 1 0.011734407040967823 0.008294910044299792 0.06004386678206687 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 25598 15293 FELPQTPLA True H1975_Epitope_Rep3 1014.5385970950199 1014.53750993586 64.233 2 0.01172574964028823 0.008294910044299792 0.06005355140063145 ['ENSG00000113369|ENST00000265138|ARRDC3'] 46972 8701 ITPQTIHGV True PC9_epitope_Rep4 964.5341804209198 964.53308993586 40.963 2 0.011718884248712895 0.008294910044299792 0.060061232278605006 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 1717 5265 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 25.32 2 0.011718473419221252 0.008294910044299792 0.06006169193240943 ['ENSG00000161847|ENST00000617231|RAVER1'] 137231 16101 YAYTGVLQL True H1975_Epitope_Rep2 1026.53859709502 1026.53750993586 67.142 2 0.011710119197833303 0.008294910044299792 0.060071039610940694 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 12041 14689 DHSPDSLPL True PC9_epitope_Rep3 979.46107505031 979.45996993586 61.638 2 0.011705019077663985 0.008294910044299792 0.060076746796683074 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 124966 11331 VHTIVNETL True PC9_epitope_Rep4 1024.55530978832 1024.5542099358602 51.364 2 0.011698119813286705 0.008294910044299792 0.06008446797274206 ['ENSG00000023516|ENST00000025301|AKAP11'] 126772 16603 VLPGVDALSNI True NCI_RA007_Epitope_Rep5 1096.61282466444 1096.61172993586 70.625 2 0.01168582494126968 0.008314317344840831 0.06009822951707129 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 37326 17966 GVSDVDYSL True PC9_epitope_Rep5 953.43419159613 953.43364496793 74.123 1 0.011674804091481809 0.008314317344840831 0.06011056721549036 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 69703 10974 LVEEPQNLIK True NCI_RA007_Epitope_Rep2 1181.6655885132898 1181.66448993586 47.296 2 0.011665357733202172 0.008314317344840831 0.06012114391358082 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 88996 21876 QVIQSLIAL True PC9_epitope_Rep2 983.6015317047498 983.60042993586 89.621 2 0.011656924054448565 0.008314317344840831 0.06013058802168574 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 116737 13353 TVDNARIVL True PC9_epitope_Rep3 999.5712942056299 999.57018993586 56.397 2 0.011649064519954103 0.008314317344840831 0.060139390272763035 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 41530 20219 HYPPVQVLF True PC9_epitope_Rep3 1098.58621599378 1098.5851099358601 83.032 2 0.011633739522690189 0.008314317344840831 0.06015655641835595 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 503 6566 AAPAEEPAAAA True PC9_epitope_Rep1 967.4610750503098 967.45996993586 30.061 2 0.011630162402677124 0.008314317344840831 0.06016056386188995 ['ENSG00000277443|ENST00000612661|MARCKS'] 78165 4788 NYARGHYTI True NCI_RA007_Epitope_Rep3 1093.5304920228102 1093.52938993586 25.799 2 0.01158563564931845 0.008314317344840831 0.06021046511656361 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 63673 23189 LMSLIINTF True PC9_epitope_Rep3 1050.57835373202 1050.5772499358602 94.467 2 0.011582759466125156 0.008314317344840831 0.06021368960778028 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 119340 2620 VAPAPAVVK True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 14.766 2 0.011568938926979909 0.008314317344840831 0.06022918576291094 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF'] 839 5047 ADALESPASP True H1975_Epitope_Rep2 956.445090633 956.44454496793 24.495 1 0.011568120985426563 0.008314317344840831 0.060230102973075204 ['MFHAS1|p.Q787Lfs*54|1|0.11|ENSG00000147324|chr8:8890696-8890699|TACT/-|frameshift_variant', 'ENSG00000147324|ENST00000276282|MFHAS1'] 8941 5187 AVFRGRMSMK True NCI_RA007_Epitope_Rep4 1181.6161533064098 1181.61451490379 26.482 3 0.011565212980989167 0.008314317344840831 0.060233363995396104 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 29158 20155 FTQDSNYLL True PC9_epitope_Rep1 1099.51858992643 1099.51748993586 82.355 2 0.011481808333341878 0.008314317344840831 0.06032695404611014 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 36814 23480 GVLENIFGV True PC9_epitope_Rep3 946.5123823471798 946.51128993586 95.595 2 0.011478387645678288 0.008314317344840831 0.06033079496490712 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 128028 10670 VPKFDQNLD True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 48.79 2 0.011460866195426325 0.008314317344840831 0.06035047200764172 ['CTSV|p.K102Rfs*25|1|0.09|ENSG00000136943|chr9:97037345-97037345|C/-|frameshift_variant', 'CTSV|p.G93Vfs*34|1|0.63|ENSG00000136943|chr9:97037370-97037370|C/-|frameshift_variant', 'CTSV|p.G174Afs*32|1|0.11|ENSG00000136943|chr9:97036623-97036623|C/-|frameshift_variant', 'ENSG00000136943|ENST00000259470|CTSV'] 138669 22287 YIITEIPSL True PC9_epitope_Rep5 1047.58521293427 1047.5841099358602 90.734 2 0.011460079298778543 0.008314317344840831 0.060351355834066374 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 1823 10069 AEIASSLPAA True H1975_Epitope_Rep2 928.48656152216 928.48546993586 43.722 2 0.011444503749906491 0.008314317344840831 0.06036885211838252 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L'] 24025 9659 EYNKSWQTF True NCI_RA007_Epitope_Rep3 1201.5403880001697 1201.53928993586 45.071 2 0.011405961077057108 0.008331451794987581 0.060412165308155186 ['ENSG00000198440|ENST00000333201|ZNF583'] 125225 8989 VIISAPSAD True H1975_Epitope_Rep1 871.46509780159 871.46454496793 39.482 1 0.011404453719189557 0.008331451794987581 0.06041385974285949 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 32872 14264 GHSEVVAIL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 60.132 2 0.011375177076244315 0.008331451794987581 0.060446777463342885 ['ENSG00000092148|ENST00000399332|HECTD1'] 7054 8901 AQQPTAVQV True PC9_epitope_Rep4 940.4977949121998 940.49668993586 41.776 2 0.011368232578122051 0.008331451794987581 0.060454587750455285 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 48302 8143 IYQRHVYNL True PC9_epitope_Rep2 1204.6352914445197 1204.6336349037902 36.679 3 0.011340741399836603 0.008331451794987581 0.0604855142904732 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 128718 13576 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 57.243 2 0.011334804822967627 0.008331451794987581 0.06049219438537591 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 17890 7190 EHYPNGVCT True PC9_epitope_Rep5 1018.41783033934 1018.41672993586 32.621 2 0.011327019706698433 0.008331451794987581 0.06050095543616055 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'CAPZA2|p.I148Nfs*53|1|0.31|ENSG00000198898|chr7:116906271-116906272|-/A|frameshift_variant'] 54907 8525 KYPNVFKKI True PC9_epitope_Rep4 1135.67536535135 1135.67371490379 40.269 3 0.011319399929723828 0.008331451794987581 0.06050953140858101 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 89148 12277 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.57528993586 52.212 2 0.011312318214335162 0.008331451794987581 0.06051750267489093 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 140768 7585 YSDGKLQTV True PC9_epitope_Rep5 1009.5080252427299 1009.50692993586 34.123 2 0.011307621875283154 0.008331451794987581 0.06052278939761723 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 87865 17743 QRIDEFEAL True PC9_epitope_Rep1 1119.5560380643099 1119.55547496793 73.046 1 0.011299687015203811 0.008331451794987581 0.06053172260408611 ['ENSG00000092820|ENST00000367075|EZR'] 2633 10624 AESEITIAP True H1975_Epitope_Rep2 929.4705771048499 929.47002496793 45.889 1 0.011295657443363026 0.008331451794987581 0.060536259573418114 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 1456 7716 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40140993586 34.632 2 0.011288896713501003 0.008331451794987581 0.06054387221797799 ['ENSG00000173545|ENST00000308683|ZNF622'] 93474 12465 RQIIAVVL True NCI_RA007_Epitope_Rep4 910.5963867546599 910.59528993586 54.954 2 0.011260151920867685 0.008331451794987581 0.060576247711967304 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 115536 12555 TRSAIILHL True PC9_epitope_Rep4 1022.62366413166 1022.62256993586 56.115 2 0.011255156267531048 0.008331451794987581 0.0605818757759359 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1', 'ENST00000518921.1_1_8:63055996-63056374:-|nuORF'] 46974 8230 ITPQTIHGV True PC9_epitope_Rep6 964.5341804209198 964.53308993586 41.24 2 0.011255040201026655 0.008331451794987581 0.060582006540546754 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 26511 12903 FIFSDTHEL True NCI_RA007_Epitope_Rep4 1107.52367530687 1107.52256993586 56.72 2 0.011252067909677789 0.008331451794987581 0.060585355305925466 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 9002 13628 AVGPIVQL True H1975_Epitope_Rep3 795.48543932335 795.48489496793 57.708 1 0.011241496027674004 0.008331451794987581 0.06059726744089096 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.D74Y|1|0.21|ENSG00000112531|chr6:163455356-163455356|G/T|missense_variant'] 121183 7882 VESGVPQPP True H1975_Epitope_Rep2 908.4603467743198 908.45924993586 35.264 2 0.01120965914602914 0.008331451794987581 0.06063315182000474 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 104064 16603 SQDPTMIGV True PC9_epitope_Rep3 946.44298245802 946.44243496793 69.0 1 0.011208560649319013 0.008331451794987581 0.06063439027585794 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 98273 8759 SEVGKLLSA True H1975_Epitope_Rep2 902.50729696674 902.50618993586 38.655 2 0.01120600363815026 0.008331451794987581 0.060637273153791096 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF', 'WDR54|p.A261T|1|0.05|ENSG00000005448|chr2:74425220-74425220|G/A|missense_variant'] 55257 17524 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.49866993586 72.706 2 0.011202785833450659 0.008331451794987581 0.06064090119361251 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 75013 9435 NHSDLDAEL True PC9_epitope_Rep4 1012.44615326216 1012.44504993586 43.904 2 0.011189873560343162 0.008331451794987581 0.06065546139541835 ['ENSG00000184292|ENST00000371225|TACSTD2'] 39741 10646 HLVDEPQNLIK True PC9_epitope_Rep6 1304.7088503076 1304.7077499358602 51.768 2 0.011181017529068667 0.008331451794987581 0.060665449301402254 ['CON__P02769'] 39531 5678 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 28.53 2 0.011146006464001351 0.008331451794987581 0.060704948011247026 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 69660 7669 LVDSNNPKI True PC9_epitope_Rep3 998.53965972418 998.53856993586 34.497 2 0.011138906396753672 0.008331451794987581 0.06071296066934991 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 134868 10927 VYVQHPITF True NCI_RA007_Epitope_Rep1 1102.5811306133398 1102.58002993586 46.497 2 0.011122707011496664 0.008331451794987581 0.06073124538598392 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 32888 6901 GHSGPITSI True PC9_epitope_Rep6 867.4450310633501 867.44392993586 35.463 2 0.011113422927580167 0.008331451794987581 0.06074172659499663 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 116664 7730 TVAVGVIK True PC9_epitope_Rep2 785.50108938749 785.49998993586 35.108 2 0.011106867851461028 0.008331451794987581 0.06074912778262991 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 75081 13434 NHVISPLL True PC9_epitope_Rep6 891.5178020807899 891.51670993586 63.363 2 0.011073851343953367 0.008350447990250288 0.06078641698453586 ['ENSG00000155096|ENST00000337198|AZIN1'] 127833 14256 VPFAAPATA True PC9_epitope_Rep2 843.4490538146299 843.44850496793 60.102 1 0.011067079483556373 0.008350447990250288 0.06079406746859112 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 118351 16396 TYNEPGSQVF True PC9_epitope_Rep3 1140.50875351872 1140.5076499358602 68.204 2 0.01106261111876021 0.008350447990250288 0.06079911601052786 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 23166 5013 EVLEENEQR True NCI_RA007_Epitope_Rep1 1144.53603089572 1144.5349299358602 23.584 2 0.011017911841038348 0.008350447990250288 0.06084963762115477 ['ENSG00000197651|ENST00000358859|CCER1'] 12549 10980 DKNSGVVITV True PC9_epitope_Rep5 1030.56587447202 1030.56476993586 47.224 2 0.011001558122921496 0.008350447990250288 0.060868129923799245 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26'] 34842 17868 GQISEVVVV True PC9_epitope_Rep4 928.5229470308799 928.52184993586 76.769 2 0.011001444722029225 0.008350447990250288 0.06086825816993869 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 8940 16566 AVFQEAAEV True PC9_epitope_Rep5 962.4709114580198 962.46980993586 68.725 2 0.010950332166553455 0.008350447990250288 0.06092608393036081 ['ENSG00000173156|ENST00000308831|RHOD'] 32225 13441 GEYGNLVTI True NCI_RA007_Epitope_Rep3 964.48656152216 964.48546993586 60.148 2 0.010916483267070115 0.008350447990250288 0.06096440286566897 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 71301 15207 LYQEIIHYF True NCI_RA007_Epitope_Rep4 1224.61791004488 1224.6168099358601 66.108 2 0.01088326049958544 0.008350447990250288 0.06100203179149677 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 90266 9717 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54436993586 42.362 2 0.010876542701140792 0.008350447990250288 0.061009642800879366 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 31462 5227 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.3913849679301 25.173 1 0.010870001613815392 0.008350447990250288 0.06101705433557235 ['ENSG00000131116|ENST00000300811|ZNF428'] 96844 5423 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 26.253 2 0.010869817674948084 0.008350447990250288 0.06101726276232898 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 108892 9975 TAAPPAQPL True PC9_epitope_Rep2 864.4705175352 864.46942993586 43.698 2 0.01085665381205327 0.008350447990250288 0.06103218062170123 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 97262 3692 SEAEIQAKA True NCI_RA007_Epitope_Rep4 945.4767251144498 945.47562993586 20.315 2 0.010844789032479527 0.008350447990250288 0.06104562881129954 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 41483 11712 HYLPDLHHL True PC9_epitope_Rep4 1143.5825275956702 1143.5808749037901 52.813 3 0.010839726038853815 0.008350447990250288 0.06105136820877315 ['ENSG00000130702|ENST00000252999|LAMA5'] 110359 7808 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 34.981 2 0.010828833055811782 0.008350447990250288 0.06106371793626282 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 118147 23962 TYIPPLLVAF True PC9_epitope_Rep3 1132.6532329244399 1132.65212993586 97.455 2 0.01079474205804103 0.008350447990250288 0.061102380957649534 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 83524 6883 PTTLPTSTG True H1975_Epitope_Rep3 873.44436235701 873.44381496793 31.434 1 0.010790768105406901 0.008350447990250288 0.06110688914428417 ['ENSG00000198131|ENST00000687789|ZNF544'] 32113 13123 GETIFVTAP True H1975_Epitope_Rep3 933.48074786573 933.47964993586 55.723 2 0.010779029124555 0.008350447990250288 0.0611202078007012 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 86126 21111 QHYPYFLIV True PC9_epitope_Rep2 1178.61243074162 1178.61132993586 86.663 2 0.010756817714321309 0.008371883109556584 0.06114541449829274 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 108470 16298 SYLTSASSL True PC9_epitope_Rep4 927.45492704071 927.4543749679301 70.649 1 0.010727101270074932 0.008371883109556584 0.06117915135131503 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 126768 16610 VLPGVDALSNI True H1975_Epitope_Rep3 1096.61282466444 1096.61172993586 69.389 2 0.010703750321340978 0.008371883109556584 0.061205671980087244 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 19901 8373 ELTRQAVAV True PC9_epitope_Rep5 985.5556441414899 985.55454993586 37.149 2 0.010699618348586352 0.008371883109556584 0.06121036579077712 ['HAGHL|p.E24Q|1|0.31|ENSG00000103253|chr16:727579-727579|G/C|missense_variant'] 96192 12042 RYPDSHQLF True PC9_epitope_Rep5 1161.55670677065 1161.5550749037902 51.313 3 0.01067070510207292 0.008371883109556584 0.061243218544969044 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 71075 17213 LYLEFLQKF True NCI_RA007_Epitope_Rep3 1199.6590465808697 1199.6579499358602 75.603 2 0.010665570025021418 0.008371883109556584 0.061249054768532284 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 1230 8729 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.4074249679301 38.537 1 0.010640407495900171 0.008394069995712706 0.061277659451970994 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 133332 11369 VVVATIKSV True PC9_epitope_Rep1 914.5800679841799 914.57896993586 48.611 2 0.010635073535520349 0.008394069995712706 0.06128372445706857 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1', 'nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 65384 12460 LREERAYIL True PC9_epitope_Rep1 1161.6506071554898 1161.64897490379 52.793 3 0.010585951737248682 0.008414546110810323 0.061339601261296416 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 70961 19076 LYGPSSVSF True PC9_epitope_Rep4 955.46509780159 955.46400993586 81.466 2 0.0105825441610246 0.008414546110810323 0.06134347894635213 ['ENSG00000149257|ENST00000358171|SERPINH1'] 8192 10949 ATFFGEVVK True NCI_RA007_Epitope_Rep3 996.5280324113198 996.52692993586 50.154 2 0.010570687686939285 0.008414546110810323 0.061356972669733875 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1'] 34677 20127 GQDGLYIGV True PC9_epitope_Rep5 920.4603467743199 920.45924993586 82.466 2 0.010535966009984748 0.008414546110810323 0.06139650271759649 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 137859 9237 YESSTASALVA True H1975_Epitope_Rep3 1097.52406922969 1097.52347496793 40.521 1 0.010526238266402553 0.008414546110810323 0.06140758125075018 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 138361 13393 YHFSSSEL True PC9_epitope_Rep5 968.4239612655999 968.42286993586 56.532 2 0.010510051437153764 0.008414546110810323 0.06142601932610433 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 107345 11865 SVLGKVNEI True PC9_epitope_Rep4 957.54949613189 957.54838993586 53.414 2 0.010463366376150595 0.008414546110810323 0.061479222146040825 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 27654 20316 FPFAPPAAA True PC9_epitope_Rep5 887.4541391950698 887.45304993586 83.191 2 0.01045647105838507 0.008414546110810323 0.06148708325642067 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 141797 20703 YVDDFGVSV True PC9_epitope_Rep1 999.4549270407099 999.45382993586 84.46 2 0.010449568255050107 0.008414546110810323 0.061494953707566385 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 121844 16223 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 67.22 2 0.010437580375872633 0.008414546110810323 0.06150862398817486 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 110014 11329 TEIVKILSA True H1975_Epitope_Rep2 972.5855472874399 972.58444993586 48.626 2 0.010435599066691423 0.008414546110810323 0.06151088359245334 ['nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 44651 8192 ILSGVVTK True PC9_epitope_Rep5 815.51165407119 815.51054993586 36.452 2 0.010390026011440798 0.008436153655290641 0.06156287620945561 ['ENSG00000142534|ENST00000270625|RPS11'] 5540 18535 AMLAVLHTV True PC9_epitope_Rep1 953.5368232732101 953.53572993586 76.083 2 0.010388996150502193 0.008436153655290641 0.06156405154646617 ['ENSG00000123395|ENST00000336854|ATG101'] 25615 7819 FENEMATAA True NCI_RA007_Epitope_Rep3 982.4065969492999 982.40548993586 37.873 2 0.010373746166979317 0.008436153655290641 0.061581457815751875 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 8407 14937 ATLSKIIQV True PC9_epitope_Rep4 971.6015317047498 971.60042993586 65.396 2 0.010370278902343448 0.008436153655290641 0.0615854158875372 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 47209 14388 IVAPGKGILAA True PC9_epitope_Rep1 1008.6331661861998 1008.63206993586 60.168 2 0.010366070347897268 0.008436153655290641 0.061590220455883755 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 106421 5895 STIKEVAQA True PC9_epitope_Rep3 945.5131106231698 945.51200993586 27.738 2 0.010351724117740397 0.008457756326401732 0.06160660064998106 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 90797 6097 RESLPSTVSA True H1975_Epitope_Rep2 1045.54038800017 1045.53928993586 28.429 2 0.010349106653369022 0.008457756326401732 0.061609589586685 ['ENSG00000114331|ENST00000326793|ACAP2'] 52688 11821 KLVWVPSDK True PC9_epitope_Rep5 1070.6124307416198 1070.61132993586 50.466 2 0.010343236089128603 0.008457756326401732 0.061616293727811265 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 9695 19462 AYGGAFYAF True PC9_epitope_Rep6 965.42831837005 965.4272299358599 87.523 2 0.010335572273098559 0.008457756326401732 0.06162504662856895 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 99762 22629 SIIPPLFTV True PC9_epitope_Rep4 985.58481901145 985.58372993586 95.271 2 0.010326814214060781 0.008457756326401732 0.061635050491614815 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 34055 23355 GLVPFLVSV True PC9_epitope_Rep2 929.5586042636099 929.55805496793 95.309 1 0.010307050771588257 0.008479354125792121 0.061657629995460476 ['ENSG00000182481|ENST00000330459|KPNA2'] 119148 10099 VAIGNPVHL True H1975_Epitope_Rep3 918.5287011176599 918.52760993586 43.886 2 0.01029919718936245 0.008479354125792121 0.06166660446115048 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant', 'ZFHX3|p.S2241Kfs*30|1|0.48|ENSG00000140836|chr16:72795962-72795963|-/C|frameshift_variant'] 38972 16240 HHIYLEGTLL True PC9_epitope_Rep4 1194.6397081186199 1194.63805490379 70.41 3 0.01029785875408666 0.008479354125792121 0.06166813402567885 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 21661 16550 ERSDTFINL True PC9_epitope_Rep4 1093.54038800017 1093.53987496793 71.634 1 0.010285536780044534 0.008479354125792121 0.06168221701143325 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 118095 16415 TYGGSWKF True PC9_epitope_Rep1 944.43921740692 944.43812993586 67.963 2 0.010267414344908202 0.008479354125792121 0.061702934118219255 ['nc|ENSG00000146416|Q9NVV5-6|AIG1', 'nc|ENSG00000146416|Q9NVV5-5|AIG1', 'nc|ENSG00000146416|Q9NVV5-3|AIG1', 'nc|ENSG00000146416|Q9NVV5-4|AIG1', 'ENSG00000146416|ENST00000357847|AIG1', 'nc|ENSG00000146416|Q9NVV5-1|AIG1'] 76042 14572 NMDNMFESY True H1975_Epitope_Rep3 1149.41069635357 1149.4095899358601 61.418 2 0.010233172554714039 0.008520806095306794 0.06174209367065828 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 109954 6407 TEGYSPPAA True H1975_Epitope_Rep2 891.3974121645898 891.39686496793 29.568 1 0.010232426494921393 0.008520806095306794 0.06174294710004845 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 33409 10495 GLAEAVLEA True H1975_Epitope_Rep2 871.4650978015899 871.46454496793 45.387 1 0.01023231816899436 0.008520806095306794 0.06174307101654492 ['nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP'] 66561 22276 LSIEQLTTL True PC9_epitope_Rep3 1016.5753765265599 1016.57426993586 90.97 2 0.010222411454715509 0.008520806095306794 0.061754404374545976 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 96908 14300 SAVGQFVSL True NCI_RA007_Epitope_Rep4 906.4810822188999 906.48053496793 62.306 1 0.010204319242671005 0.008520806095306794 0.06177510630364028 ['BRF1|p.L343Pfs*104|1|0.45|ENSG00000185024|chr14:105226091-105226092|-/A|frameshift_variant', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1', 'nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1'] 53030 8189 KPLEPVSTV True PC9_epitope_Rep4 968.55424715916 968.55314993586 38.958 2 0.010203870906299739 0.008520806095306794 0.06177561938097311 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 91980 8847 RKQMVIDVL True NCI_RA007_Epitope_Rep3 1100.6375999436398 1100.6365099358602 41.891 2 0.010192953296344055 0.008520806095306794 0.06178811457580928 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 17264 16164 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 66.989 2 0.010187657670317707 0.008520806095306794 0.061794176143705276 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 98131 9888 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 43.022 2 0.010181879673948208 0.008520806095306794 0.061800790393421234 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 83523 6778 PTTLPTSTG True H1975_Epitope_Rep2 873.44436235701 873.44381496793 30.987 1 0.010177417342100405 0.008520806095306794 0.06180589894942557 ['ENSG00000198131|ENST00000687789|ZNF544'] 28016 10781 FQNNVQVKV True PC9_epitope_Rep5 1074.5821932425 1074.58108993586 46.46 2 0.010135435635029017 0.008520806095306794 0.06185397689684546 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550699.5_1_12:58109828-58111744:+|nuORF'] 13934 10846 DRAGSIVL True PC9_epitope_Rep4 829.46576650793 829.46466993586 49.479 2 0.010130523331432235 0.008520806095306794 0.06185960448062202 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 89470 11766 QYFPKAPEF True NCI_RA007_Epitope_Rep5 1125.5494961318898 1125.54838993586 51.916 2 0.010124943105431933 0.008520806095306794 0.06186599774006204 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 93040 8011 RPLLKAITA True PC9_epitope_Rep6 981.63350053937 981.63240993586 40.286 2 0.010123115910538018 0.008520806095306794 0.06186809127037588 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 137460 13972 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.46948993586 58.89 2 0.010115164974138406 0.008520806095306794 0.06187720181060437 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 122079 14881 VGAAALFL True H1975_Epitope_Rep3 760.44832553864 760.4477749679301 62.626 1 0.010109546113263004 0.008520806095306794 0.061883640801341476 ['ENST00000257700.6_1_7:105205780-105205849:+|nuORF'] 140441 14280 YRGQFPEL True PC9_epitope_Rep4 1008.5028802926398 1008.50178993586 62.829 2 0.010108245648295131 0.008520806095306794 0.06188513115880246 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 44259 21130 IKYPENFFLL True PC9_epitope_Rep4 1282.6961603655798 1282.6950699358601 89.439 2 0.010089973682223132 0.008520806095306794 0.06190607421472845 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 109717 6090 TEDPHTVL True H1975_Epitope_Rep2 910.43961132974 910.43850993586 28.4 2 0.01006059339905517 0.008520806095306794 0.06193976134950787 ['ENST00000567111.1_1_16:2284613-2285107:+|nuORF', 'ENST00000569796.1_1_16:2284558-2285107:+|nuORF', 'ENSG00000167967|ENST00000301727|E4F1'] 1295 7873 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 35.23 1 0.010029646107523377 0.008539690408057502 0.06197526105999909 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 33121 9514 GISDVFAK True NCI_RA007_Epitope_Rep2 835.44396843419 835.44286993586 41.621 2 0.010022340812621168 0.008539690408057502 0.06198364335513642 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 121207 12882 VESPVWVSA True H1975_Epitope_Rep3 972.4916469025999 972.49109496793 54.775 1 0.010019644937724987 0.008539690408057502 0.061986736904812614 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC', 'ENST00000557520.1_1_14:88425979-88431954:-|nuORF', 'nc|ENSG00000054983|P54803-5|GALC'] 31829 8874 GEIRTITVV True NCI_RA007_Epitope_Rep3 986.5760452328999 986.57494993586 41.997 2 0.010003057923739253 0.008539690408057502 0.062005773425812385 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 1233 10579 AEDELNIEA True H1975_Epitope_Rep3 1002.45056993626 1002.44946993586 45.761 2 0.010002082075180172 0.008539690408057502 0.06200689352961625 ['ENST00000564047.1_1_16:89590622-89596095:+|nuORF', 'nc|ENSG00000197912|Q9UQ90-2|SPG7', 'ENSG00000197912|ENST00000645818|SPG7'] 96721 20445 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.56298993586 84.706 2 0.009970736915170125 0.008539690408057502 0.062042880912402884 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 39911 16247 HPFGFVAV True PC9_epitope_Rep6 872.4544735482399 872.45336993586 74.857 2 0.00996669349718017 0.008539690408057502 0.062047524377463734 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 103020 20979 SPFPLEAV True PC9_epitope_Rep5 858.44871946146 858.44762993586 85.755 2 0.009966635971410997 0.008539690408057502 0.06204759044211716 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 22900 6692 EVDYSIGR True H1975_Epitope_Rep3 937.4505103666098 937.44940993586 30.695 2 0.009942621809972619 0.008539690408057502 0.06207517407942691 ['ENSG00000111652|ENST00000543155|COPS7A'] 108623 10617 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 45.732 3 0.009896895984207045 0.008539690408057502 0.06212772372785221 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 111340 4305 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 22.971 2 0.009892335475357443 0.008539690408057502 0.06213296676752036 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 5974 11660 APHPPLSVV True PC9_epitope_Rep4 915.51780208079 915.51670993586 52.612 2 0.00987117734480961 0.008539690408057502 0.062157296076039266 ['ENSG00000183856|ENST00000361170|IQGAP3'] 82798 8579 PRQVGVVV True PC9_epitope_Rep4 852.5181364339599 852.51702993586 40.479 2 0.009857826941988859 0.008539690408057502 0.062172651354741044 ['ENST00000465651.1_1_1:205561255-205569586:+|nuORF'] 37896 16081 GYSEHFVEF True PC9_epitope_Rep6 1113.47672511445 1113.47562993586 74.186 2 0.009849190781140788 0.008539690408057502 0.062182586053019136 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 10088 12263 AYTPFHAVL True NCI_RA007_Epitope_Rep4 1017.5283667644899 1017.52726993586 54.166 2 0.009772493957736618 0.008539690408057502 0.06227087074489114 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 739 18933 AAVLSVPAV True PC9_epitope_Rep4 825.4960040070499 825.4954549679301 80.915 1 0.00977110600661045 0.008539690408057502 0.062272469319446085 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 84884 7272 QEAPPVPGA True H1975_Epitope_Rep2 864.4341320264798 864.43302993586 32.907 2 0.009761667550500893 0.008539690408057502 0.06228334094379665 ['ENST00000496125.2_2_19:45596475-45612027:+|nuORF', 'ENSG00000104866|ENST00000221462|PPP1R37'] 87398 8988 QPVSGTQVV True PC9_epitope_Rep2 913.48689587533 913.48578993586 39.926 2 0.009733151624724419 0.008539690408057502 0.06231619604306773 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 87473 9766 QQDPQQYNV True PC9_epitope_Rep3 1118.49925146418 1118.49814993586 42.517 2 0.009726494420538022 0.008539690408057502 0.062323868245820764 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 103026 20278 SPFQFTVGP True PC9_epitope_Rep4 978.4810822188999 978.47998993586 86.142 2 0.00968735925585881 0.00855451250534657 0.062368985463619526 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 32033 13035 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.49187496793 55.224 1 0.009662353828161488 0.00855451250534657 0.06239782678921837 ['ENSG00000051523|ENST00000261623|CYBA'] 24380 14330 FAAEPGNNEL True PC9_epitope_Rep5 1060.48253877088 1060.4814499358602 60.121 2 0.00965523144532025 0.00855451250534657 0.0624060437138506 ['ENSG00000130340|ENST00000392185|SNX9'] 53253 12827 KQFVQWDEL True NCI_RA007_Epitope_Rep3 1191.5924235730297 1191.5913299358601 57.696 2 0.009654966469942372 0.00855451250534657 0.062406349426356665 ['ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3', 'ENSG00000137100|ENST00000259632|DCTN3'] 25616 7950 FENEMATAA True NCI_RA007_Epitope_Rep4 982.4065969492999 982.40548993586 37.325 2 0.009651523766623057 0.00855451250534657 0.06241032151723071 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 42001 23802 IDFPGGILSF True PC9_epitope_Rep3 1064.55424715916 1064.5531499358601 96.841 2 0.00963541525571195 0.00855451250534657 0.06242890973202006 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 100417 17509 SLADLQNDEV True PC9_epitope_Rep2 1102.5142328219802 1102.5131299358602 72.606 2 0.009612976768674217 0.00855451250534657 0.062454809715085984 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 141667 22066 YTTDFIYQL True PC9_epitope_Rep2 1162.55464108198 1162.5540749679299 90.348 1 0.009612406115062106 0.00855451250534657 0.062455468513072245 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 108552 15047 SYNEHWNYL True PC9_epitope_Rep6 1224.5199869087598 1224.5188899358602 69.917 2 0.009597058789100056 0.00855451250534657 0.06247318850219203 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 39978 9065 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.4488349679301 44.932 1 0.009565224781698427 0.00855451250534657 0.06250995678245498 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 134405 23475 VYPGLAVFF True PC9_epitope_Rep2 1011.5429541994698 1011.5423749679301 95.767 1 0.009558465932177754 0.00855451250534657 0.06251776547807202 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 84306 7198 PYSDSTAKL True PC9_epitope_Rep3 980.48147614172 980.48036993586 32.7 2 0.0095471622310621 0.00855451250534657 0.06253082671413575 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF'] 88276 14087 QSEIASMLY True H1975_Epitope_Rep1 1040.48484727 1040.48374993586 59.352 2 0.009534246036606082 0.00855451250534657 0.0625457538269206 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 90316 7055 REFAVTATP True NCI_RA007_Epitope_Rep3 990.5134449763399 990.51234993586 34.869 2 0.009531469290031114 0.00855451250534657 0.06254896325595519 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'nc|ENSG00000109756|Q9Y4G8|RAPGEF2'] 57864 6101 LEFEHQRAP True NCI_RA007_Epitope_Rep1 1125.55670677065 1125.5550749037902 27.769 3 0.009527235178609839 0.00855451250534657 0.06255385739476037 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 47300 11072 IVDSATALY True H1975_Epitope_Rep1 951.49131254943 951.4907649679301 47.552 1 0.009518174297719518 0.00855451250534657 0.06256433174342971 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 116928 14664 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep6 1178.5641606002998 1178.56306993586 68.329 2 0.009506634969387395 0.00855451250534657 0.06257767319693297 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 121327 9143 VEVDAAVTP True H1975_Epitope_Rep3 899.4600124211499 899.4594649679301 40.159 1 0.009497210998130381 0.00855451250534657 0.06258857061816728 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 37115 15052 GVPTKVFNV True PC9_epitope_Rep3 959.5440168286299 959.54290993586 63.027 2 0.00949568322719638 0.00855451250534657 0.06259033740078523 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 97565 11256 SEETMVLEA True H1975_Epitope_Rep2 1007.4481274081098 1007.44702993586 48.341 2 0.009484747573795083 0.00855451250534657 0.06260298504216136 ['ENSG00000125730|ENST00000245907|C3'] 9298 5715 AVQKAIPMYK True NCI_RA007_Epitope_Rep4 1147.64235097091 1147.64071490379 28.597 3 0.009475615394904473 0.00855451250534657 0.06261354843682669 ['nc|ENSG00000131100|P36543-3|ATP6V1E1', 'nc|ENSG00000131100|P36543-2|ATP6V1E1', 'ENSG00000131100|ENST00000253413|ATP6V1E1', 'ENST00000439215.1_1_1:43369124-43369580:+|nuORF', 'ENST00000481365.5_1_22:18080958-18102283:-|nuORF'] 28595 14331 FSGPAITL True H1975_Epitope_Rep2 804.43815477776 804.43760496793 60.273 1 0.009451212868686474 0.00855451250534657 0.06264178236514215 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 2747 4101 AETKPPM[Oxidation]AP True H1975_Epitope_Rep2 956.4637182830398 956.46262993586 20.866 2 0.00944911044623763 0.00855451250534657 0.06264421536116331 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 32117 13071 GETIFVTAP True NCI_RA007_Epitope_Rep4 933.48074786573 933.47964993586 57.377 2 0.009441630067112131 0.00855451250534657 0.06265287252656121 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 35072 7900 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42828993586 39.813 2 0.009439189534213497 0.00855451250534657 0.06265569720194351 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 105220 9882 SRIARALAL True PC9_epitope_Rep4 969.6083484206899 969.60724993586 45.661 2 0.009430727003911607 0.00855451250534657 0.06266549253107255 ['ENSG00000142871|ENST00000451137|CCN1'] 98128 9562 SESLIKQIP True H1975_Epitope_Rep1 1013.57571087973 1013.5746099358599 41.706 2 0.009415292005450384 0.00855451250534657 0.06268336159964591 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 19577 19881 ELQGSNLLTV True PC9_epitope_Rep2 1072.57643915572 1072.57534993586 81.865 2 0.009402648635607703 0.00855451250534657 0.06269800183556541 ['ENSG00000106328|ENST00000265825|FSCN3'] 35837 6848 GTLMWHQMK True NCI_RA007_Epitope_Rep3 1130.5365060033798 1130.53486490379 34.049 3 0.009382315569234348 0.00855451250534657 0.06272155198637473 ['ENST00000352767.7_2_3:184032446-184033585:+|nuORF', 'ENST00000346169.6_1_3:184032401-184033585:+|nuORF'] 119645 21389 VAVAGLLTV True PC9_epitope_Rep3 841.52730413533 841.5267549679301 87.572 1 0.009379133256029699 0.00855451250534657 0.06272523844204465 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 47240 14301 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.45752993586 59.834 2 0.009361325023525005 0.00855451250534657 0.06274587104904181 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 135212 9397 WEVDVTGKEA True NCI_RA007_Epitope_Rep5 1132.540053647 1132.53894993586 42.786 2 0.009356985317267436 0.00855451250534657 0.06275089985079593 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 104084 11604 SQDSTAVAL True PC9_epitope_Rep5 890.4345259492999 890.43397496793 49.632 1 0.009352915120148709 0.00855451250534657 0.06275561664079313 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 119628 9981 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 43.347 2 0.009342116100121206 0.00855451250534657 0.06276813256818219 ['CON__P00761'] 47303 11327 IVDSATALY True H1975_Epitope_Rep2 951.49131254943 951.49020993586 48.618 2 0.00931001809982658 0.00855451250534657 0.06280534550512208 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 121985 19027 VFTYVGALF True NCI_RA007_Epitope_Rep4 1015.5378688190298 1015.5372749679301 82.308 1 0.009303285864415846 0.00855451250534657 0.06281315278070376 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 107823 16634 SVVADTPEL True PC9_epitope_Rep5 929.47057710485 929.46948993586 68.988 2 0.009293784576385957 0.00855451250534657 0.06282417260417762 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 108917 9449 TADGAHFEL True NCI_RA007_Epitope_Rep5 959.43486030247 959.43376993586 42.982 2 0.009265889004492666 0.00855451250534657 0.06285653547665167 ['ENSG00000085872|ENST00000546361|CHERP', 'ENST00000546538.1_1_19:16643407-16652813:-|nuORF'] 40083 11201 HPVHPFLAV True PC9_epitope_Rep4 1015.56033559911 1015.55922993586 50.862 2 0.009252944061768105 0.00855451250534657 0.06287155798866899 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 35262 5952 GRDENSVEL True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 31.194 2 0.009238458461191328 0.00855451250534657 0.06288837181911103 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 98933 16113 SHAENILQI True PC9_epitope_Rep3 1023.53490869691 1023.53380993586 67.13 2 0.009219569788211151 0.008573936134302495 0.06291030180409532 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 9458 7594 AVVGVVAGG True NCI_RA007_Epitope_Rep5 727.4228390667898 727.42229496793 35.905 1 0.009217583913145252 0.008573936134302495 0.06291260778420905 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 121550 10915 VFDFCTHIK True H1975_Epitope_Rep1 1108.5375515491999 1108.5364499358602 46.947 2 0.009215146305292193 0.008573936134302495 0.0629154384045231 ['THAP2|p.I79V|1|0.14|ENSG00000173451|chr12:71674366-71674366|A/G|missense_variant'] 6413 6434 APRQPGLMA True PC9_epitope_Rep4 939.4960210903898 939.49492993586 31.844 2 0.009199925942172204 0.008573936134302495 0.06293311502556989 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 25220 6408 FDENGQEIK True NCI_RA007_Epitope_Rep1 1078.4931034545798 1078.49200993586 28.95 2 0.009192399327140293 0.008573936134302495 0.06294185774750302 ['ENST00000437348.5_1_11:31115730-31149186:-|nuORF', 'DCDC1|p.V715Wfs*20|1|0.2|ENSG00000170959|chr11:30894319-30894319|C/-|frameshift_variant', 'DCDC1|p.M747Ifs*23|1|0.21|ENSG00000170959|chr11:30892971-30892972|-/A|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.K188Sfs*8|1|0.14|ENSG00000170959|chr11:30920827-30920827|T/-|frameshift_variant', 'ENST00000342355.8_1_11:30965860-31263019:-|nuORF'] 104971 9722 SRDKSFLL True PC9_epitope_Rep2 964.5341804209199 964.53308993586 42.736 2 0.009189131978375082 0.008573936134302495 0.06294565331714312 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E'] 76839 8260 NRAVVGVVA True PC9_epitope_Rep5 883.5239500903898 883.52284993586 36.713 2 0.009188532048901299 0.008573936134302495 0.06294635025496112 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 86258 19963 QIPVKWIGV True PC9_epitope_Rep5 1038.6226015024997 1038.62150993586 81.842 2 0.00916975765874198 0.008573936134302495 0.0629681635667018 ['ENSG00000035687|ENST00000366535|ADSS2'] 118302 14145 TYLSIIHSL True NCI_RA007_Epitope_Rep3 1045.58079626017 1045.5796899358602 62.925 2 0.009166889668342516 0.008573936134302495 0.06297149631594723 ['ENSG00000133030|ENST00000651222|MPRIP'] 40132 7529 HPYPPGPGV True PC9_epitope_Rep2 919.4552018242299 919.45410993586 34.328 2 0.009163340094366083 0.008573936134302495 0.06297562129445168 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 60382 15895 LGTIHLVAV True PC9_epitope_Rep4 921.5647522732099 921.56364993586 69.069 2 0.00914690717102781 0.008573936134302495 0.06299472088930022 ['ENST00000438671.3_1_3:45731844-45750997:+|nuORF'] 105461 18525 SRVFSVAEL True PC9_epitope_Rep3 1006.5447451046199 1006.54364993586 76.474 2 0.009143168687070916 0.008573936134302495 0.06299906668506734 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 95845 14640 RYKGPGFEYF True PC9_epitope_Rep4 1262.6084079903396 1262.60730993586 64.242 2 0.009140475994621595 0.008573936134302495 0.06300219695000255 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 85070 11019 QEISQELLY True H1975_Epitope_Rep2 1121.5604547384098 1121.55987496793 47.413 1 0.009125087253480125 0.008573936134302495 0.06302008879882957 ['ENSG00000134698|ENST00000373210|AGO4'] 99350 16421 SHSVIGIAL True PC9_epitope_Rep4 895.5127167003499 895.51160993586 71.125 2 0.009112223709291808 0.008573936134302495 0.0630350478154404 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 76366 8080 NPYYGGESA True PC9_epitope_Rep4 956.3875757568799 956.38646993586 38.532 2 0.009111993118382546 0.008573936134302495 0.06303531599546146 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 36089 21410 GVAETLVLV True PC9_epitope_Rep5 899.5327834385898 899.53168993586 87.417 2 0.0090361855583977 0.008617973988569371 0.06312353043517466 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 117087 21692 TVISILNTI True PC9_epitope_Rep4 972.58554728744 972.58444993586 91.641 2 0.009018889473096908 0.008617973988569371 0.06314367103069646 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 128640 6888 VPVEGSRYAA True PC9_epitope_Rep5 1047.5349086969097 1047.53380993586 31.464 2 0.009012683486529787 0.008617973988569371 0.06315089890116588 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3', 'ENST00000542002.5_1_12:10853889-10868397:-|nuORF'] 8760 9974 AVDEDRKMYL True PC9_epitope_Rep1 1238.5965229772999 1238.59486490379 43.23 3 0.009012676482691256 0.008617973988569371 0.06315090705863598 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 61140 8791 LIIYSRNQ True NCI_RA007_Epitope_Rep2 1005.5607295219299 1005.55962993586 38.841 2 0.009010631707446473 0.008617973988569371 0.06315328867330114 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 27981 20364 FQIPPNAEL True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 83.365 2 0.008978590758548337 0.008638531449653559 0.06319061713628721 ['ENST00000597277.1_9:43426178-43426727:-|nuORF', 'ENSG00000004478|ENST00000001008|FKBP4'] 53250 8137 KQFQFGHAL True NCI_RA007_Epitope_Rep4 1074.5610638750998 1074.5599699358602 38.089 2 0.008962303525801622 0.008638531449653559 0.06320959888875602 ['ENSG00000018510|ENST00000264167|AGPS'] 130884 10721 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.4329149679301 46.265 1 0.008947435041038156 0.008638531449653559 0.06322693114700896 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 115488 16790 TRPPALLL True PC9_epitope_Rep1 879.5541875895099 879.55308993586 69.407 2 0.008927513957467752 0.008638531449653559 0.063250159179123 ['ENSG00000090971|ENST00000205194|NAT14'] 61637 9040 LKPTPEGDL True PC9_epitope_Rep5 968.5178616504398 968.51676993586 39.717 2 0.008924059031878984 0.008638531449653559 0.06325418832273741 ['CON__P02754'] 8387 16173 ATLPSTVAV True PC9_epitope_Rep5 857.4858332461699 857.48472993586 67.198 2 0.008917462660350746 0.008638531449653559 0.0632618815972367 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 86392 4280 QKFDQKQEL True NCI_RA007_Epitope_Rep4 1162.5982372294595 1162.5965849037902 22.796 3 0.00891104329797331 0.008638531449653559 0.06326936914386465 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF'] 26985 10571 FLEGVGIR True NCI_RA007_Epitope_Rep1 889.5021520166499 889.50104993586 45.102 2 0.008868862222408576 0.008638531449653559 0.06331858673395067 ['ENSG00000101331|ENST00000452892|CCM2L'] 132520 10906 VVDPNDPQM True PC9_epitope_Rep1 1013.44879611445 1013.44827496793 46.834 1 0.008867845795341426 0.008638531449653559 0.06331977309450643 ['ENSG00000151883|ENST00000281631|PARP8'] 76328 19519 NPTLILAA True PC9_epitope_Rep1 811.4803539429099 811.47980496793 79.9 1 0.0088643195669551 0.008638531449653559 0.06332388900007947 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 5738 13742 APAPVIISS True PC9_epitope_Rep2 853.49091862661 853.48982993586 58.146 2 0.008840041440761216 0.008655186367519446 0.06335223284770364 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'ENST00000490546.1_1_1:31439047-31452930:-|nuORF'] 31928 6998 GEMPKTLAC True NCI_RA007_Epitope_Rep3 948.4408742830399 948.43976993586 34.637 2 0.008835519494452928 0.008655186367519446 0.06335751317545331 ['nc|ENSG00000124731|Q9NP99-3|TREM1', 'ENST00000586287.1_1_6:41250094-41254393:-|nuORF', 'nc|ENSG00000124731|Q9NP99-2|TREM1', 'ENSG00000124731|ENST00000244709|TREM1'] 98199 15308 SETILTMVA True H1975_Epitope_Rep2 963.49468367771 963.4941349679301 64.041 1 0.008825182233474348 0.008655186367519446 0.06336958542877058 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 117956 5123 TYAEKLHRL True PC9_epitope_Rep4 1129.62439240765 1129.6227449037901 26.363 3 0.008824886873703018 0.008655186367519446 0.0633699303882659 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 140242 14840 YQYPVIIHL True NCI_RA007_Epitope_Rep4 1144.6280808057597 1144.6269899358601 64.545 2 0.008815938146895873 0.008655186367519446 0.06338038258279798 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 92791 8506 RPAGSYLEA True PC9_epitope_Rep5 962.48214484806 962.48104993586 37.66 2 0.008799817004151035 0.008655186367519446 0.06339921569026581 ['ENST00000573483.1_1_17:3785816-3788993:-|nuORF', 'ENSG00000004660|ENST00000348335|CAMKK1', 'nc|ENSG00000004660|Q8N5S9-2|CAMKK1'] 116813 16357 TVEFLEENSF True H1975_Epitope_Rep2 1213.5502839775297 1213.54918993586 68.137 2 0.008791959835425437 0.008655186367519446 0.06340839623983519 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8', 'nc|ENSG00000172943|Q9UPP1-5|PHF8', 'PHF8|p.K342Nfs*17|1|0.11|ENSG00000172943|chrX:54011150-54011150|C/-|frameshift_variant'] 37958 9437 HADPTELAL True NCI_RA007_Epitope_Rep4 965.4818104948899 965.48070993586 43.159 2 0.00879134913558858 0.008655186367519446 0.06340910984403489 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 650 10053 AATATFAAA True PC9_epitope_Rep5 793.3970182417698 793.39646496793 43.648 1 0.008783857130673858 0.008655186367519446 0.0634178647901028 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 26746 6403 FKDLGEEHFK True PC9_epitope_Rep4 1248.6138872935996 1248.61225490379 31.72 3 0.008775973151155666 0.008655186367519446 0.06342707882640655 ['CON__P02769'] 128446 20307 VPSAVLIVA True PC9_epitope_Rep5 867.5429541994699 867.5424049679301 83.155 1 0.008774680096893346 0.008655186367519446 0.06342859012553477 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 96075 18952 RYLTVAAVF True PC9_epitope_Rep4 1038.5862159937797 1038.5851099358601 80.986 2 0.008742855953380632 0.008655186367519446 0.06346579466684352 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 106679 16532 STTNGGILTV True PC9_epitope_Rep3 961.50802524273 961.50692993586 68.728 2 0.008741925151279578 0.008655186367519446 0.06346688309799456 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 104031 10226 SQDNVIKVC True PC9_epitope_Rep1 1004.49608066004 1004.49498993586 44.215 2 0.008736746727889983 0.008655186367519446 0.06347293874610084 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 14060 6283 DRNLQVSL True PC9_epitope_Rep4 943.50869394907 943.50758993586 31.225 2 0.0087278114114041 0.008655186367519446 0.06348338878689293 ['ENSG00000142959|ENST00000372207|BEST4', 'ENST00000524877.5_1_11:61726936-61727579:+|nuORF', 'nc|ENSG00000127325|Q8N1M1-1|BEST3', 'nc|ENSG00000127325|Q8N1M1-5|BEST3', 'BEST1|p.N428Tfs*54|1|0.4|ENSG00000167995|chr11:61962430-61962430|C/-|frameshift_variant', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000167995|ENST00000378043|BEST1', 'ENSG00000127325|ENST00000330891|BEST3', 'nc|ENSG00000167995|O76090-3|BEST1'] 48549 7526 KALSDHHIYL True PC9_epitope_Rep4 1195.63495709135 1195.63330490379 36.315 3 0.008721952123020797 0.008655186367519446 0.06349024209185716 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 104161 8525 SQFGTEHVL True NCI_RA007_Epitope_Rep5 1016.4927095317599 1016.49160993586 39.474 2 0.008710129959102227 0.008655186367519446 0.06350407165603077 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 120741 4590 VEKPVGVAA True NCI_RA007_Epitope_Rep4 868.5018176634799 868.50072993586 24.063 2 0.008675608440332822 0.008655186367519446 0.0635444686497325 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'ENST00000562659.1_1_16:85698640-85699994:+|nuORF'] 35464 5665 GSIDAITGK True NCI_RA007_Epitope_Rep3 860.46034677432 860.45924993586 29.268 2 0.008652894798497407 0.008655186367519446 0.06357105925476467 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 103855 6790 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 33.321 2 0.008627376750088709 0.008655186367519446 0.06360094351381519 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 96637 10201 SAIGLADPP True H1975_Epitope_Rep2 839.4388830537499 839.43778993586 44.242 2 0.008616904328954816 0.008655186367519446 0.06361321103236878 ['ENSG00000186838|ENST00000335426|SELENOV'] 30162 19756 FYPPKVELF True PC9_epitope_Rep4 1138.60628273202 1138.6051899358602 84.115 2 0.008613282591868979 0.008655186367519446 0.06361745401657906 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 99760 23348 SIIPPLFTV True PC9_epitope_Rep2 985.58481901145 985.58372993586 95.282 2 0.008588371447837126 0.008655186367519446 0.06364664434628053 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 40892 12758 HSIPVTVEV True PC9_epitope_Rep4 979.53384606775 979.53274993586 56.936 2 0.008587057946796966 0.008655186367519446 0.06364818377371548 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 23035 6618 EVGSIIGK True NCI_RA007_Epitope_Rep2 801.45961849833 801.45852993586 30.351 2 0.008585371068046231 0.008655186367519446 0.06365016084449976 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENST00000550910.1_1_12:53848575-53849202:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3', 'nc|ENSG00000090097|P57723-2|PCBP4', 'ENSG00000090097|ENST00000461554|PCBP4', 'ENST00000492809.5_1_3:51994845-51995337:-|nuORF', 'ENST00000498822.5_1_3:51994845-51996905:-|nuORF'] 107945 15889 SVWTKVEGV True PC9_epitope_Rep1 1003.5338460677498 1003.53274993586 65.927 2 0.008577640716182148 0.008655186367519446 0.06365922166624681 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 79365 4957 PASGPIRPIVR True NCI_RA007_Epitope_Rep5 1161.6982260542497 1161.6965849037902 25.768 3 0.00856697490654121 0.008655186367519446 0.06367172485252455 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 48127 21114 IYPDSFTVL True PC9_epitope_Rep4 1053.53826274185 1053.5371699358602 89.377 2 0.008537041234880723 0.008655186367519446 0.06370682557582566 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 27187 20406 FLLPHPGLQV True PC9_epitope_Rep5 1119.6440652230701 1119.64296993586 83.529 2 0.008517560533557353 0.008655186367519446 0.06372967724291477 ['ENSG00000184743|ENST00000398868|ATL3'] 91945 5005 RKNDENITL True NCI_RA007_Epitope_Rep4 1101.57783613805 1101.5767299358602 25.734 2 0.008499685295448815 0.008655186367519446 0.06375065137391969 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 5076 21365 ALLELLHEL True PC9_epitope_Rep4 1049.61209638845 1049.61098993586 90.347 2 0.008473174330888268 0.008676692067345516 0.06378176845525901 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF', 'ENSG00000161904|ENST00000293760|LEMD2'] 15201 5911 EADHLQEEY True H1975_Epitope_Rep2 1132.46728262956 1132.46618993586 27.723 2 0.008459627015788411 0.008676692067345516 0.06379767419806648 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 92761 4511 RPAAQPSFHQA True PC9_epitope_Rep5 1208.6050539454 1208.60341490379 22.419 3 0.008459351508376652 0.008676692067345516 0.06379799770080895 ['ENSG00000151929|ENST00000369085|BAG3'] 92902 9744 RPGANLSL True PC9_epitope_Rep4 826.4661008611 826.4650099358599 45.117 2 0.008454851263027701 0.008676692067345516 0.06380328210536262 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 139795 8484 YPIEHGIITN True NCI_RA007_Epitope_Rep2 1155.5924235730297 1155.5913299358601 37.644 2 0.008436304683851535 0.008676692067345516 0.06382506406595577 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 31415 5889 GEAAGSPVP True H1975_Epitope_Rep3 783.37628279719 783.37573496793 27.661 1 0.00842397200435634 0.00869780195082483 0.06383955140998601 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 8868 21969 AVFPDDMPTL True PC9_epitope_Rep3 1104.51614739828 1104.51557496793 89.804 1 0.008422624478862604 0.00869780195082483 0.06384113452260307 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 56544 23028 LDGLYLLTL True PC9_epitope_Rep2 1019.5902983147099 1019.5897749679301 94.07 1 0.008406267223234556 0.00869780195082483 0.0638603539986755 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 64706 17748 LPVWLENHTA True PC9_epitope_Rep2 1178.60840799034 1178.60730993586 73.55 2 0.008397978690668889 0.00869780195082483 0.06387009462973764 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 118552 12818 TYQQVQQTL True PC9_epitope_Rep5 1107.55603806431 1107.5549499358601 54.314 2 0.008386244647665892 0.00869780195082483 0.06388388642378592 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 40549 9247 HRFPTVAV True PC9_epitope_Rep4 925.5133854066898 925.5122899358599 43.165 2 0.008368012405939854 0.00869780195082483 0.06390532067898147 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 20179 8944 ENGSLYDY True H1975_Epitope_Rep1 959.38724140371 959.3866949679301 39.307 1 0.008357830752651325 0.00869780195082483 0.06391729296065495 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 451 12438 AALQAVNSV True PC9_epitope_Rep5 871.47633119163 871.4752299358599 52.844 2 0.008339200695629902 0.008716358898324122 0.0639392040695135 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 24902 17852 FAYGGWNYL True H1975_Epitope_Rep2 1089.4919812557698 1089.4908899358602 73.989 2 0.008318078547737955 0.008716358898324122 0.06396405339184771 ['SLC7A5|p.F394Sfs*22|1|0.28|ENSG00000103257|chr16:87836607-87836607|A/-|frameshift_variant', 'ENSG00000103257|ENST00000261622|SLC7A5'] 27807 9336 FQDDPHAGL True PC9_epitope_Rep2 998.4457593393398 998.44466993586 41.249 2 0.00830807647965808 0.008716358898324122 0.06397582308522898 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 9590 20916 AYAENIALL True PC9_epitope_Rep3 976.5229470308799 976.52239496793 85.73 1 0.008286887258803968 0.008716358898324122 0.06400076268074707 ['ENSG00000196455|ENST00000356763|PIK3R4'] 46952 19972 ITPENLPQI True PC9_epitope_Rep5 1023.5600608155898 1023.55947496793 81.874 1 0.008285139720895339 0.008716358898324122 0.06400281986821844 ['ENSG00000015479|ENST00000394805|MATR3'] 15179 8604 EAAVAAVAV True H1975_Epitope_Rep2 799.44396843419 799.44341496793 38.049 1 0.008260041970061732 0.008716358898324122 0.0640323705376588 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.C638Lfs*2|1|0.17|ENSG00000066735|chr14:104173749-104173750|-/T|frameshift_variant'] 137988 21667 YFQNTQGLIF True PC9_epitope_Rep2 1229.6080736371698 1229.6069699358602 88.819 2 0.008254083163082933 0.008716358898324122 0.06403938816746402 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 86255 17444 QIPQVLNQV True PC9_epitope_Rep6 1037.58694426977 1037.58584993586 79.715 2 0.008200077580158711 0.008716358898324122 0.06410301791215735 ['ENSG00000205339|ENST00000379719|IPO7'] 104319 22151 SQIPFPLSL True PC9_epitope_Rep4 1000.5593325396 1000.55877496793 93.424 1 0.008192474544351474 0.008716358898324122 0.0641119798950346 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 39002 10827 HHNPPTIEL True PC9_epitope_Rep5 1056.53524305008 1056.5341499358601 46.634 2 0.00818282675912296 0.008716358898324122 0.06412335353431595 ['ENSG00000139083|ENST00000396373|ETV6'] 82397 12182 PPLPPPPPP True PC9_epitope_Rep3 907.51673945163 907.51564993586 51.894 2 0.008180755286873787 0.008716358898324122 0.06412579577316005 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'ENST00000549137.1_1_12:50039600-50046016:-|nuORF', 'FMNL3|p.P522S|1|0.35|ENSG00000161791|chr12:49651972-49651972|G/A|missense_variant', 'ENST00000373055.5_1_1:38174529-38174823:+|nuORF', 'ENST00000478808.2_1_12:109490357-109491595:-|nuORF', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000184083|ENST00000375180|FAM120C', 'nc|ENSG00000184083|Q9NX05-2|FAM120C', 'ENSG00000135144|ENST00000548759|DTX1', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000120645|ENST00000538872|IQSEC3', 'nc|ENSG00000161791|Q8IVF7-2|FMNL3', 'ENSG00000161791|ENST00000335154|FMNL3', 'nc|ENSG00000161791|Q8IVF7|FMNL3', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000011114|ENST00000334746|BTBD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 110371 7977 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 35.655 1 0.008157261968492608 0.008716358898324122 0.06415349926458652 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 118489 14336 TYPYLQHEI True PC9_epitope_Rep4 1162.5658744720201 1162.56476993586 63.044 2 0.008156689481745737 0.008716358898324122 0.06415417446381871 ['nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 108772 8325 SYSSTFHSL True NCI_RA007_Epitope_Rep3 1027.46107505031 1027.45996993586 39.863 2 0.008155797599234287 0.008716358898324122 0.06415522637433521 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 126300 20258 VLIDDLTTL True PC9_epitope_Rep6 1001.56447748969 1001.56338993586 90.608 2 0.00814262185699117 0.008716358898324122 0.06417076780063556 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 94 9478 AAAPVVAAA True PC9_epitope_Rep1 739.4228390667898 739.42229496793 41.315 1 0.008138056043987109 0.008716358898324122 0.06417615409632269 ['ENST00000563328.4_1_16:72822270-72822732:+|nuORF'] 71126 21521 LYLPSFFTY True NCI_RA007_Epitope_Rep1 1149.57464825057 1149.57354993586 88.051 2 0.008125816215251392 0.008716358898324122 0.06419059521131004 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 104559 12188 SQPPVQVSV True PC9_epitope_Rep6 939.5025459394699 939.50144993586 58.243 2 0.00811576967611589 0.008716358898324122 0.0642024505116841 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 12492 18878 DKEIEVRNAV True H1975_Epitope_Rep1 1171.6197009500302 1171.6186099358601 78.718 2 0.008114392850512436 0.008716358898324122 0.06420407535410867 ['ENST00000575787.1_1_17:6802758-6803315:+|nuORF'] 23972 19591 EYMAQHLVF True PC9_epitope_Rep1 1136.5324661687598 1136.53136993586 80.184 2 0.008112785061558343 0.008716358898324122 0.0642059728062209 ['ENST00000473429.5_1_1:110591964-110592183:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-3|STRIP1', 'ENST00000485775.5_1_1:110582506-110596531:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-2|STRIP1', 'ENSG00000143093|ENST00000369795|STRIP1'] 140873 5400 YSEAVASHY True H1975_Epitope_Rep2 1025.44542498617 1025.4443299358602 25.804 2 0.00809265669237664 0.00875794390424648 0.06422973132251575 ['nc|ENSG00000147044|O14936-3|CASK', 'nc|ENSG00000147044|O14936-4|CASK', 'nc|ENSG00000147044|O14936-6|CASK', 'nc|ENSG00000147044|O14936-2|CASK', 'ENSG00000147044|ENST00000378163|CASK'] 67935 6525 LTDDEKTYY True H1975_Epitope_Rep2 1146.50808481238 1146.50698993586 30.012 2 0.008053341758236202 0.00875794390424648 0.06427615684431055 ['nc|ENSG00000145293|Q9UHY7-2|ENOPH1', 'ENSG00000145293|ENST00000273920|ENOPH1'] 9986 17841 AYPHNLMTF True PC9_epitope_Rep2 1092.50625142092 1092.5051499358601 73.924 2 0.008037972518025589 0.00875794390424648 0.06429431304692959 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 28420 16217 FSALPSLEEY True H1975_Epitope_Rep2 1154.54955570154 1154.54897496793 67.588 1 0.008028756148623823 0.00875794390424648 0.0643052026095383 ['ENST00000380946.3_1_10:3825413-3827293:-|nuORF'] 111337 4041 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 21.804 2 0.008026210402498022 0.00875794390424648 0.06430821078344381 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 118811 15188 VAAGVLCEL True H1975_Epitope_Rep2 873.46298962661 873.4624449679301 63.577 1 0.008009298445757238 0.00875794390424648 0.06432819758886352 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 72824 24280 MPLGLLWLG True PC9_epitope_Rep5 998.5623097450599 998.56176496793 98.41 1 0.008006305234223878 0.00875794390424648 0.06433173552529435 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 43180 22724 IFGVIIDTF True PC9_epitope_Rep4 1023.56408356687 1023.56298993586 95.628 2 0.008001798579595695 0.00875794390424648 0.06433706262299758 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 8890 20636 AVFPSIVG True PC9_epitope_Rep3 788.4432401582 788.44269496793 84.647 1 0.007986781024421803 0.00875794390424648 0.06435481667545905 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 98136 8094 SESLNHLLY True H1975_Epitope_Rep2 1074.5345743437401 1074.53346993586 36.081 2 0.007971705553136641 0.00875794390424648 0.06437264311143415 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant', 'PRKDC|p.D566G|1|0.33|ENSG00000253729|chr8:47933099-47933099|T/C|missense_variant'] 67472 4335 LSSSSFSR True NCI_RA007_Epitope_Rep5 869.42429561877 869.42318993586 23.279 2 0.00796733245132432 0.00875794390424648 0.06437781494856595 ['LAMP1|p.N181S|1|0.39|ENSG00000185896|chr13:113310847-113310847|A/G|missense_variant'] 43948 13422 IIDNSQGF True PC9_epitope_Rep5 892.4290466460399 892.4279499358599 56.643 2 0.007925773453020871 0.00875794390424648 0.06442698105892176 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 74819 13550 NHDVQVIL True PC9_epitope_Rep3 936.50288029264 936.50178993586 57.176 2 0.007919863133566178 0.00875794390424648 0.06443397564634543 ['ENSG00000179151|ENST00000315127|EDC3'] 89032 19685 QVLEDFPTI True PC9_epitope_Rep6 1060.54407639828 1060.5429699358601 88.377 2 0.007913251761386473 0.00875794390424648 0.06444180061153901 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 54156 7347 KVQNYTVNI True NCI_RA007_Epitope_Rep5 1077.58185888933 1077.5807699358602 34.939 2 0.00791127381941891 0.00875794390424648 0.06444414177403479 ['ENSG00000101544|ENST00000262198|ADNP2', 'ADNP2|p.V571Cfs*147|1|0.2|ENSG00000101544|chr18:80137122-80137123|-/T|frameshift_variant', 'ADNP2|p.L794Qfs*9|1|0.3|ENSG00000101544|chr18:80137794-80137798|TGGGG/-|frameshift_variant', 'ADNP2|p.R132L|1|0.32|ENSG00000101544|chr18:80135808-80135808|G/T|missense_variant'] 138765 20703 YITDLFQVL True NCI_RA007_Epitope_Rep4 1110.59611197114 1110.5950099358602 89.694 2 0.007900377981968866 0.00875794390424648 0.06445703968580717 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10'] 9593 20925 AYAENIALL True PC9_epitope_Rep5 976.5229470308799 976.52239496793 85.545 1 0.007899091622407454 0.00875794390424648 0.06445856254498812 ['ENSG00000196455|ENST00000356763|PIK3R4'] 7932 5335 ATAPPGVLK True NCI_RA007_Epitope_Rep4 852.50690304392 852.50580993586 27.086 2 0.007869777656407482 0.008777640588169267 0.06449327368295323 ['ENSG00000105538|ENST00000222145|RASIP1'] 4312 21829 AIIPVSGITVV True PC9_epitope_Rep3 1067.65904658087 1067.6579499358602 89.265 2 0.007849425279588672 0.008777640588169267 0.06451738198718267 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 31812 10923 GEIIPHIPA True H1975_Epitope_Rep2 945.52836676449 945.52726993586 47.047 2 0.00784710265650328 0.008777640588169267 0.0645201336933152 ['ENSG00000035687|ENST00000366535|ADSS2'] 33665 16166 GLGPVAEV True PC9_epitope_Rep5 740.4068546494799 740.40630496793 67.172 1 0.007831087541390622 0.008777640588169267 0.06453910998855701 ['nc|ENSG00000128283|Q00587-2|CDC42EP1', 'ENSG00000128283|ENST00000249014|CDC42EP1'] 6409 7818 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 35.062 2 0.007797688181486157 0.008777640588169267 0.06457869911483323 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 34881 18340 GQLPNLQTV True PC9_epitope_Rep1 968.5290950404801 968.5285449679301 75.333 1 0.007780553703669644 0.008777640588169267 0.06459901653522108 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 46565 14036 ITAGKLVTL True PC9_epitope_Rep4 914.58006798418 914.57896993586 61.9 2 0.007773509931622319 0.008777640588169267 0.06460737024706073 ['ENSG00000139410|ENST00000403593|SDSL', 'SDSL|p.D221G|1|0.21|ENSG00000139410|chr12:113435547-113435547|A/G|missense_variant'] 71773 4905 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 23.95 2 0.0077729987125147205 0.008777640588169267 0.06460797657164741 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 26554 22081 FIISDFESV True PC9_epitope_Rep2 1055.5175272972701 1055.51642993586 90.406 2 0.007745749176933782 0.008777640588169267 0.06464030205575551 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1'] 116326 9778 TTEHNGLLL True NCI_RA007_Epitope_Rep3 996.5240096600398 996.52290993586 45.527 2 0.007727399475191768 0.008777640588169267 0.06466207710718228 ['NRXN2|p.P526H|1|0.29|ENSG00000110076|chr11:64667471-64667471|G/T|missense_variant'] 64779 18522 LQAPELANV True PC9_epitope_Rep2 953.5181960036099 953.51708993586 76.589 2 0.007717873418328443 0.008777640588169267 0.06467338369391805 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 124962 13287 VHTDCIVSV True PC9_epitope_Rep5 971.47461693947 971.47350993586 56.118 2 0.0076972896963407806 0.008777640588169267 0.06469782010839957 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 139010 17302 YKVEYPIMY True PC9_epitope_Rep6 1204.58383303528 1204.58272993586 79.159 2 0.007691564251162362 0.008777640588169267 0.06470461849773407 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 131077 14352 VTDTGALYLY True H1975_Epitope_Rep1 1114.55464108198 1114.5540749679299 60.397 1 0.007689863330150396 0.008777640588169267 0.06470663827928388 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 64889 11017 LQEDPPAGV True PC9_epitope_Rep2 924.4552613938798 924.45416993586 47.697 2 0.007668226223659413 0.008796535242241322 0.06473233591869199 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 141482 17418 YTIPDEYRI True PC9_epitope_Rep4 1168.57643915572 1168.57534993586 74.991 2 0.007664169399403134 0.008796535242241322 0.06473715496917841 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF'] 131117 16498 VTEEIFLEY True H1975_Epitope_Rep3 1141.55430672881 1141.5532099358602 68.952 2 0.0076598565323541 0.008796535242241322 0.06474227848182618 ['ENSG00000100418|ENST00000263256|DESI1', 'ENST00000463886.1_1_22:41998573-42000148:-|nuORF'] 63829 9249 LNKEVSTI True PC9_epitope_Rep1 902.50729696674 902.50618993586 40.428 2 0.007654543780395525 0.008796535242241322 0.06474859025977582 ['nc|ENSG00000268758|Q86SQ3|ADGRE4P'] 4095 12573 AHQQSIPAVL True PC9_epitope_Rep2 1062.5821932425 1062.58108993586 53.67 2 0.0076295674711660145 0.008796535242241322 0.06477826973255933 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 134467 13659 VYPQPGMQRF True PC9_epitope_Rep5 1221.5964634076497 1221.5953699358602 57.562 2 0.0076274568045086805 0.008796535242241322 0.06478077834275438 ['ENSG00000151929|ENST00000369085|BAG3'] 87290 13874 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.5072699358602 58.386 2 0.007619632459241584 0.008796535242241322 0.06479007855671169 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 90105 6409 REAPPVVPP True H1975_Epitope_Rep3 960.5392658013599 960.53816993586 29.629 2 0.007601133422893219 0.008796535242241322 0.06481207118986988 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 133178 11720 VVRNEQVEI True PC9_epitope_Rep6 1084.58767254576 1084.58656993586 56.227 2 0.007600464223182069 0.008796535242241322 0.06481286688086174 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 117034 8324 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.56438993586 36.959 2 0.007576276139819413 0.008796535242241322 0.06484163216700128 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 41466 11583 HYLDTTTLI True NCI_RA007_Epitope_Rep3 1075.55497543515 1075.5538699358601 52.69 2 0.007564729740878413 0.008796535242241322 0.06485536710492665 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 119625 9709 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 42.3 2 0.00754695933205483 0.008796535242241322 0.06487651027852372 ['CON__P00761'] 5121 15629 ALLLLC[Carbamidomethyl]GEDD True H1975_Epitope_Rep3 1117.53252601784 1117.53197496793 65.533 1 0.007530389290873769 0.008796535242241322 0.06489623018337494 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF'] 9221 13943 AVNPHFIAV True PC9_epitope_Rep4 966.5287011176599 966.52760993586 61.536 2 0.007512228863374118 0.008796535242241322 0.0649178482566309 ['ENSG00000106789|ENST00000375077|CORO2A'] 44517 18277 ILLPRIIEA True PC9_epitope_Rep6 1036.6644663144798 1036.6633699358601 82.944 2 0.007509746739987376 0.008796535242241322 0.06492080340622909 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 591 11135 AARLPLDAA True PC9_epitope_Rep5 896.5079656730799 896.50686993586 47.815 2 0.007505468635901318 0.008796535242241322 0.0649258970526959 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 35960 5132 GTVDPQELQK True NCI_RA007_Epitope_Rep3 1113.56660274801 1113.56550993586 27.181 2 0.0074906872492455576 0.008796535242241322 0.06494349867968693 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 54725 15921 KYMDVQFDF True NCI_RA007_Epitope_Rep2 1191.52704643515 1191.5259499358601 66.646 2 0.007488004428697564 0.008796535242241322 0.06494669377929271 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 119055 10366 VAGGAVYL True H1975_Epitope_Rep1 748.4119400299201 748.41139496793 44.821 1 0.007451903941881941 0.008818777488555784 0.06498969970317937 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 87789 11416 QRDLDGTCSL True PC9_epitope_Rep5 1106.50262259246 1106.5015299358602 48.911 2 0.007426365098115214 0.00884002692393987 0.06502013734625949 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD', 'ENST00000511682.1_1_4:169819766-169825111:+|nuORF'] 35712 5899 GTFGGLGSK True NCI_RA007_Epitope_Rep4 822.42356734278 822.42246993586 29.314 2 0.007405717461955828 0.00884002692393987 0.0650447538225908 ['ENSG00000124942|ENST00000378024|AHNAK'] 6403 6541 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 30.574 2 0.007402005527119169 0.00884002692393987 0.0650491800401562 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 105412 11875 SRSPGLVL True PC9_epitope_Rep5 827.48650195251 827.48540993586 50.675 2 0.007377165349688125 0.00884002692393987 0.06507880632510264 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 116461 20958 TTLPGLLTV True PC9_epitope_Rep4 913.5484335027301 913.54732993586 88.776 2 0.007354454450311477 0.00884002692393987 0.06510590242880765 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 36796 14851 GVLDAILATK True NCI_RA007_Epitope_Rep4 999.59644632431 999.59534993586 64.587 2 0.007348303761175865 0.00884002692393987 0.06511324228121895 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 41436 19121 HYILHNSFF True PC9_epitope_Rep3 1176.5716285587998 1176.56998490379 78.771 3 0.007282725632077513 0.008872756604154063 0.0651915399426522 ['ENSG00000163659|ENST00000295924|TIPARP'] 54709 13004 KYLYVDKNF True PC9_epitope_Rep5 1188.6179100448796 1188.6168099358601 55.028 2 0.0072679260994191275 0.008872756604154063 0.06520922030566366 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 109933 14381 TEGEPPFLP True H1975_Epitope_Rep2 985.4756624852898 985.47456993586 60.467 2 0.007257330654773661 0.008872756604154063 0.06522188055948329 ['ENSG00000241058|ENST00000377304|NSUN6'] 88531 19121 QTAPEEAFIKL True PC9_epitope_Rep2 1245.6605031328497 1245.6594099358601 78.92 2 0.007254494842231626 0.008872756604154063 0.0652252693371743 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 125143 17075 VIGPELVHV True PC9_epitope_Rep2 961.55966689277 961.55856993586 70.931 2 0.00725353523115701 0.008872756604154063 0.0652264160978041 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'ENST00000485409.5_1_3:196921289-197023334:-|nuORF'] 126663 6217 VLNTNIDGR True PC9_epitope_Rep6 1000.53015766964 1000.52906993586 32.383 2 0.007252263017784588 0.008872756604154063 0.06522793645107783 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 72989 18025 MQMSPALTC True PC9_epitope_Rep5 980.4129452830399 980.41239496793 74.349 1 0.007246780910340495 0.008872756604154063 0.06523448814180863 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 72004 6502 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39475496793 29.926 1 0.007237281903348374 0.008872756604154063 0.06524584168112378 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 87843 15099 QRGPPIIL True PC9_epitope_Rep3 892.5494365622399 892.54832993586 63.215 2 0.007205471945249194 0.008872756604154063 0.06528387343354237 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 74821 13363 NHDVQVIL True PC9_epitope_Rep5 936.50288029264 936.50178993586 56.415 2 0.00719735202334189 0.008872756604154063 0.06529358436533064 ['ENSG00000179151|ENST00000315127|EDC3'] 104081 11237 SQDSTAVAL True PC9_epitope_Rep2 890.4345259492999 890.43397496793 48.55 1 0.007181096771206652 0.008872756604154063 0.06531302809412438 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 31930 8837 GEMWNNTAA True H1975_Epitope_Rep2 992.4021802752 992.40108993586 38.958 2 0.007155802996932356 0.008872756604154063 0.06534329237552781 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000446155.1_1_1:45997278-45997635:+|nuORF', 'ENST00000507778.1_1_4:41844266-41844645:-|nuORF', 'nc|ENSG00000124097|B2RPK0|HMGB1P1'] 470 11561 AALTSDPAV True PC9_epitope_Rep5 843.4337976733099 843.43270993586 49.465 2 0.007154962626722893 0.008872756604154063 0.06534429807839796 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 29456 24576 FVEPFVILL True PC9_epitope_Rep1 1075.63176920387 1075.6306699358602 99.395 2 0.00714244343041371 0.008872756604154063 0.06535928172654114 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ATP2A2-IFT81|3|fusion', 'ATP2A1|p.S287Lfs*11|1|0.12|ENSG00000196296|chr16:28887646-28887647|-/G|frameshift_variant', 'ATP2A2-IFT81|2|fusion', 'nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1'] 130236 22136 VSFGDFVQV True PC9_epitope_Rep5 996.4916469025999 996.49054993586 90.181 2 0.007136412814256544 0.008872756604154063 0.06536650046357519 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 75409 12447 NIVERLKEV True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 53.182 2 0.007126801436128021 0.008872756604154063 0.06537800673079537 ['nc|ENSG00000258659|Q9BYJ4-2|TRIM34', 'ENST00000491385.1_1_11:5653561-5662456:+|nuORF', 'ENSG00000258659|ENST00000429814|TRIM34'] 87429 15002 QPYMPTVSA True PC9_epitope_Rep4 992.4637179025999 992.46262993586 65.644 2 0.0071225271537858695 0.008872756604154063 0.0653831242057179 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 25668 7623 FEQEMATAA True NCI_RA007_Epitope_Rep5 996.4222470134398 996.42114993586 36.02 2 0.007090968126250789 0.008872756604154063 0.06542091873628078 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 56136 13893 LAVHPSGVAL True PC9_epitope_Rep5 962.5549158654999 962.55380993586 58.459 2 0.0070759536937837 0.008872756604154063 0.065438905825184 ['ENSG00000187608|ENST00000649529|ISG15'] 106012 10190 SSVPGVRLLQ True NCI_RA007_Epitope_Rep5 1054.61349337078 1054.6123899358602 45.829 2 0.0070702975299087815 0.008872756604154063 0.06544568284895481 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 7247 16352 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.52387496793 68.143 1 0.007055440793568995 0.008872756604154063 0.0654634863332428 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 135981 20340 WQLLLPTAL True NCI_RA007_Epitope_Rep4 1053.62226714933 1053.62116993586 88.06 2 0.00704719532210956 0.008872756604154063 0.06547336890075503 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 21253 16708 ERDQFIATL True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 69.515 2 0.007043389672117229 0.008872756604154063 0.06547793054135785 ['ENSG00000138778|ENST00000265148|CENPE'] 126819 15556 VLPSSLPTF True NCI_RA007_Epitope_Rep4 959.5327834385901 959.53168993586 67.569 2 0.007041707618614461 0.008872756604154063 0.06547994681418441 ['ENSG00000117983|ENST00000529681|MUC5B'] 9219 15413 AVNPHFIAV True PC9_epitope_Rep1 966.5287011176599 966.52760993586 64.104 2 0.007037249873336764 0.008872756604154063 0.06548529053870214 ['ENSG00000106789|ENST00000375077|CORO2A'] 21464 17259 ERLDPGLAL True PC9_epitope_Rep5 982.5447451046198 982.54364993586 71.398 2 0.00702843548752523 0.008872756604154063 0.0654958578045254 ['ENSG00000237649|ENST00000428849|KIFC1'] 57746 5579 LEENPDPSA True H1975_Epitope_Rep3 970.4243551884199 970.42324993586 26.5 2 0.007025181170078766 0.008872756604154063 0.06549975963562522 ['ENSG00000068654|ENST00000263857|POLR1A', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF', 'ENST00000424089.5_1_2:86315699-86317049:-|nuORF'] 4057 3887 AHISGATSV True PC9_epitope_Rep4 841.4293809992101 841.42828993586 21.133 2 0.007020723717204737 0.008872756604154063 0.06550510428939686 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 17787 14027 EHSLSIGSL True PC9_epitope_Rep4 941.4818104948899 941.48070993586 61.866 2 0.007013739556495601 0.008872756604154063 0.06551347925515362 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 54625 9939 KYLEERAMRQF True PC9_epitope_Rep2 1469.74491854649 1469.74327490379 43.561 3 0.0070126978847936915 0.008872756604154063 0.06551472843489732 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 71765 4168 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 21.135 2 0.007006509409820818 0.008872756604154063 0.06552215008461788 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 4643 21964 ALADDDFLTV True PC9_epitope_Rep1 1078.5182555732601 1078.51767496793 89.303 1 0.006984430956895973 0.008872756604154063 0.06554863352361463 ['ENSG00000104738|ENST00000649973|MCM4'] 121022 10117 VEQFPGPPT True H1975_Epitope_Rep2 970.4759968384598 970.47488993586 43.911 2 0.006976653500247889 0.008872756604154063 0.06555796471837931 ['ENST00000464508.1_1_20:30135258-30136223:+|nuORF'] 62024 20510 LLDRFLATV True PC9_epitope_Rep2 1046.61243074162 1046.61132993586 84.322 2 0.006940123129219493 0.008872756604154063 0.06560180699485749 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 109650 15389 TEAPPIIFA True H1975_Epitope_Rep2 957.5171333744499 957.51658496793 64.352 1 0.0069228804818554975 0.008872756604154063 0.06562250898283327 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 77882 8683 NVHAVFQEA True PC9_epitope_Rep4 1013.4930438849299 1013.49194993586 40.89 2 0.006920209770307976 0.008872756604154063 0.06562571597353034 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 12139 13093 DIDLDALAA True H1975_Epitope_Rep2 915.4549270407099 915.4543749679301 55.487 1 0.00691967633787427 0.008872756604154063 0.06562635653410913 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 54173 6036 KVTEGSFVYK True NCI_RA007_Epitope_Rep1 1156.61282466444 1156.61172993586 27.519 2 0.006914703545062542 0.008872756604154063 0.06563232824076869 ['ENSG00000057608|ENST00000380191|GDI2'] 99411 3653 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 20.173 2 0.0069108030849262606 0.008872756604154063 0.06563701250992442 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 95732 20465 RYGNTPFLF True PC9_epitope_Rep3 1113.56072952193 1113.5596299358601 83.975 2 0.006878440887986095 0.008872756604154063 0.0656758881893629 ['ENSG00000188419|ENST00000357749|CHM'] 84382 18743 QAADLAYQL True PC9_epitope_Rep5 991.4974605590301 991.49636993586 77.107 2 0.006873981953784957 0.008872756604154063 0.06568124599301245 ['ENSG00000147113|ENST00000398000|DIPK2B'] 1211 7635 AEDDLNTVA True H1975_Epitope_Rep2 946.42435518842 946.42324993586 34.32 2 0.006853851257188221 0.008872756604154063 0.06570543910943068 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 65274 16269 LQVLEERDLE True PC9_epitope_Rep1 1242.6455813446998 1242.64448993586 67.397 2 0.006850021804358134 0.008872756604154063 0.06571004215242714 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57', 'CCDC57|p.E177Sfs*20|1|0.5|ENSG00000176155|chr17:82195352-82195352|C/-|frameshift_variant'] 60118 15139 LGLTNQPEL True PC9_epitope_Rep3 983.52876068731 983.52766993586 63.37 2 0.00683163948833614 0.008872756604154063 0.06573214144295819 ['ENSG00000179626|ENST00000641569|OR6C4', 'OR6C4|p.L38*|1|0.39|ENSG00000179626|chr12:55551337-55551337|C/-|frameshift_variant', 'OR6C4|p.H52Tfs*16|1|0.15|ENSG00000179626|chr12:55551376-55551376|C/-|frameshift_variant'] 121795 16796 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 69.43 2 0.0068206822830507935 0.008872756604154063 0.06574531703336702 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 21224 6415 ERDPHEEIL True PC9_epitope_Rep4 1136.5462016566 1136.5445549037902 31.769 3 0.006798178305658973 0.008872756604154063 0.06577238369492637 ['ENSG00000153140|ENST00000283122|CETN3'] 41527 19740 HYPPVQVLF True PC9_epitope_Rep2 1098.58621599378 1098.5851099358601 81.319 2 0.00678366825560676 0.008872756604154063 0.06578984033220142 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 82389 18733 PPLPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 76.845 2 0.006777351757854383 0.008872756604154063 0.0657974406794712 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 111271 18834 THLLGVAL True PC9_epitope_Rep1 822.49633836022 822.49524993586 77.229 2 0.0067608442314717205 0.008872756604154063 0.06581730669505564 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 71044 17827 LYKDVRDLL True PC9_epitope_Rep1 1133.6444591458899 1133.64280490379 73.365 3 0.0067484486711102565 0.008872756604154063 0.06583222727487456 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 25450 9213 FEEGLETTA True H1975_Epitope_Rep2 995.4447562798299 995.4442049679301 40.392 1 0.006746322587329447 0.008872756604154063 0.06583478671814792 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 102964 8548 SPFAEGTSA True PC9_epitope_Rep4 865.38176210045 865.3806699358599 40.359 2 0.0067412990009051025 0.008872756604154063 0.06584083457441953 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 104019 22179 SQDGSFYFL True PC9_epitope_Rep2 1062.46582607758 1062.46472993586 90.798 2 0.006730995069413134 0.008872756604154063 0.06585324077136157 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant'] 39035 4219 HHSDGSVSL True PC9_epitope_Rep3 937.42535824793 937.42426993586 21.344 2 0.006727495389483502 0.008872756604154063 0.06585745489596996 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 86086 7632 QHSTAQLNL True PC9_epitope_Rep4 1010.5145076055 1010.51340993586 36.736 2 0.006724433135401412 0.008872756604154063 0.06586114247103522 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 6873 17479 AQIDGTLSTI True PC9_epitope_Rep4 1017.5342399905701 1017.5336749679301 75.233 1 0.0067100932000710494 0.008872756604154063 0.06587841283427971 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 133597 11849 VYAALQRQLL True NCI_RA007_Epitope_Rep1 1173.6869926642098 1173.6858899358601 50.072 2 0.006691610688858577 0.008872756604154063 0.06590067760818469 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 7225 9130 ARDDTHYLL True PC9_epitope_Rep4 1102.54072235334 1102.5396299358601 42.705 2 0.006683499654247975 0.008872756604154063 0.0659104503637028 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 98148 19490 SESPIVVVL True PC9_epitope_Rep6 941.5433481222899 941.54279496793 87.63 1 0.006678188848789821 0.008872756604154063 0.0659168498232277 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 2540 14679 AEQPWPPLPA True H1975_Epitope_Rep2 1104.56039516876 1104.55928993586 61.624 2 0.0066661391092343045 0.008872756604154063 0.06593137144250463 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 20687 19348 EQDQSVLVL True PC9_epitope_Rep4 1029.5342399905699 1029.53367496793 82.532 1 0.006644848767875992 0.008872756604154063 0.06595703545939215 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 102707 16361 SMAPGLTSV True PC9_epitope_Rep5 861.4266041178901 861.42550993586 67.93 2 0.006643285737951369 0.008892970745038305 0.06595891989371433 ['ENSG00000198682|ENST00000456849|PAPSS2', 'nc|ENSG00000198682|O95340|PAPSS2'] 2548 13047 AEQPYFIEA True H1975_Epitope_Rep2 1066.49712620586 1066.4960299358602 55.307 2 0.006638522881486343 0.008892970745038305 0.06596466239437712 ['ENSG00000123607|ENST00000243344|TTC21B'] 90171 7767 REDLSRLV True H1975_Epitope_Rep2 986.5508931142199 986.54978993586 34.823 2 0.00663686605744509 0.008892970745038305 0.0659666600935485 ['ENSG00000185043|ENST00000328649|CIB1', 'nc|ENSG00000185043|Q99828-2|CIB1'] 102859 12146 SPAAPVITA True PC9_epitope_Rep2 825.45961849833 825.45852993586 52.029 2 0.006636317144070059 0.008892970745038305 0.0659673219509582 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 122224 13014 VGAPKIPSV True PC9_epitope_Rep5 866.5225531080599 866.52144993586 55.065 2 0.006621976061004877 0.008892970745038305 0.065984615705386 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 77263 11064 NSATGVPTV True PC9_epitope_Rep1 844.42904664604 844.4284949679301 47.446 1 0.006611948526424597 0.008892970745038305 0.06599670992776022 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 111215 14430 THISPNAIF True PC9_epitope_Rep4 998.5185303567799 998.51742993586 63.414 2 0.00658820508370425 0.008892970745038305 0.0660253539103884 ['ENSG00000125398|ENST00000245479|SOX9'] 47266 12435 IVDEAIYY True H1975_Epitope_Rep3 984.4804135125601 984.4798649679301 53.021 1 0.006580996562992118 0.008892970745038305 0.06603405218142121 ['ENSG00000111229|ENST00000228825|ARPC3'] 82600 7033 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.40686993586 31.977 2 0.006562084805138166 0.008892970745038305 0.06605687664591213 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 22086 9522 ESPEVTQNP True H1975_Epitope_Rep2 999.45090428943 999.44980993586 41.598 2 0.006550547903572864 0.008892970745038305 0.0660708035107665 ['ENSG00000164309|ENST00000446378|CMYA5'] 86092 13364 QHSVPLQL True PC9_epitope_Rep3 920.50796567308 920.50686993586 56.437 2 0.006541537976591012 0.008892970745038305 0.06608168153111145 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 107586 15103 SVPKELVAL True PC9_epitope_Rep4 954.5749826037398 954.57388993586 66.022 2 0.006503153139883257 0.00891377379619261 0.06612804083170233 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000553041.5_1_12:96414526-96429297:-|nuORF'] 41534 20188 HYPPVQVLF True PC9_epitope_Rep5 1098.58621599378 1098.5851099358601 82.701 2 0.006497850546914544 0.00891377379619261 0.06613444705984764 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 29503 23971 FVFPGELLL True PC9_epitope_Rep2 1033.5848190114498 1033.58427496793 97.697 1 0.006489103986086607 0.00891377379619261 0.06614501512449919 ['ENSG00000105281|ENST00000542575|SLC1A5'] 120193 9166 VEAPPVVTA True H1975_Epitope_Rep3 881.4858332461699 881.48472993586 40.247 2 0.006488843277132192 0.00891377379619261 0.06614533014753808 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 55576 6193 LAHAAFSAA True PC9_epitope_Rep6 857.43955176009 857.43844993586 32.277 2 0.006474730737690789 0.00891377379619261 0.06616238455287092 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 68579 11837 LTGVEVEY True H1975_Epitope_Rep2 908.4491133842798 908.4485649679301 50.607 1 0.006457196323404268 0.00891377379619261 0.06618357898780101 ['CON__Q0V8M9'] 124949 9372 VHSPPNVGL True PC9_epitope_Rep2 918.49231560894 918.49120993586 41.383 2 0.006442486930861207 0.00891377379619261 0.06620136286051745 ['ENSG00000146247|ENST00000275034|PHIP'] 134445 5473 VYPPIRHHL True NCI_RA007_Epitope_Rep4 1130.6348975217 1130.63326490379 27.636 3 0.006434113197210921 0.00891377379619261 0.06621148851401047 ['nc|ENSG00000155975|Q8NEZ2-3|VPS37A', 'ENSG00000155975|ENST00000324849|VPS37A', 'nc|ENSG00000155975|Q8NEZ2-2|VPS37A'] 1349 6343 AEEAARKLLPA True H1975_Epitope_Rep2 1167.66117183919 1167.65953490379 29.328 3 0.00642912595703186 0.008935369731714963 0.06621751974632324 ['nc|ENSG00000088298|Q9BV94-2|EDEM2', 'ENSG00000088298|ENST00000374492|EDEM2'] 133649 11084 VYANGIRNI True PC9_epitope_Rep1 1018.5559784946599 1018.55488993586 47.522 2 0.006420944233071445 0.008935369731714963 0.06622741511199147 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 96736 11923 SALSGHLETV True PC9_epitope_Rep3 1012.5189242796 1012.51782993586 50.883 2 0.006418684165620817 0.008935369731714963 0.06623014875080495 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 44188 9169 IIYGGSVTG True NCI_RA007_Epitope_Rep2 865.45453311789 865.4539849679301 40.274 1 0.006413120794349553 0.008935369731714963 0.0662368782427828 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 93681 10758 RQSLGEPAL True PC9_epitope_Rep2 969.5243440132099 969.52324993586 46.699 2 0.006388360172401924 0.008954956568460643 0.06626683541119456 ['ENST00000556883.1_1_14:93650687-93651102:-|nuORF'] 24368 18841 FAADIISVL True H1975_Epitope_Rep2 947.53278343859 947.53168993586 78.229 2 0.006373192352678666 0.008954956568460643 0.06628519180677137 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 21943 10372 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4818899358602 44.906 2 0.006366206391979118 0.008954956568460643 0.06629364770516434 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 59082 16336 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46963496793 68.055 1 0.006359615676934368 0.008954956568460643 0.0663016259739078 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 64596 13637 LPSRFIESA True PC9_epitope_Rep3 1018.5447451046199 1018.54364993586 57.52 2 0.00635958813191142 0.008954956568460643 0.06630165931961908 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 108550 15926 SYNEHWNYL True PC9_epitope_Rep4 1224.5199869087598 1224.5188899358602 69.187 2 0.006355080436178984 0.008954956568460643 0.0663071164664589 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 117193 19503 TVLGKIWKL True PC9_epitope_Rep5 1056.66955169492 1056.66844993586 80.071 2 0.006331136289441245 0.008954956568460643 0.06633610988897441 ['ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF'] 24587 16963 FAIDPHLLL True NCI_RA007_Epitope_Rep4 1037.59096702105 1037.5898699358602 73.515 2 0.006329075855493539 0.008954956568460643 0.06633860528924014 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 132483 14687 VVDGNFEEV True PC9_epitope_Rep4 1006.46074069714 1006.4596499358599 64.428 2 0.006327518141608549 0.008954956568460643 0.06634049189230941 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 67855 19467 LTAPALALA True PC9_epitope_Rep4 839.5116540711899 839.51054993586 82.996 2 0.00630023568523762 0.008954956568460643 0.06637354152096725 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 89602 15532 QYPVIIHLI True NCI_RA007_Epitope_Rep4 1094.64881625034 1094.6477099358601 67.462 2 0.00629306520175588 0.008954956568460643 0.0663822299123447 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 35714 5720 GTFGGLGSK True NCI_RA007_Epitope_Rep5 822.42356734278 822.42246993586 28.69 2 0.006290318119558854 0.008954956568460643 0.06638555875774267 ['ENSG00000124942|ENST00000378024|AHNAK'] 1854 11827 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.48512993586 50.487 2 0.006287613402452843 0.008954956568460643 0.06638883639493325 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 119622 9098 VATVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 40.337 2 0.0062860809189419055 0.008954956568460643 0.06639069354971247 ['CON__P00761'] 34829 14348 GQIGMIQAL True NCI_RA007_Epitope_Rep4 929.5004377644899 929.49988496793 62.496 1 0.006260913574642101 0.00897533461658982 0.0664211987039112 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A2|p.G861C|1|0.16|ENSG00000018625|chr1:160136587-160136587|G/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENSG00000132681|ENST00000368081|ATP1A4'] 58202 13070 LELDTNLPA True H1975_Epitope_Rep1 984.51277627 984.51166993586 55.362 2 0.006257696427109726 0.00897533461658982 0.06642509898237937 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 134 6329 AAAYPHTSL True NCI_RA007_Epitope_Rep5 929.46068112749 929.45958993586 31.021 2 0.0062455841855795936 0.00897533461658982 0.06643978476573668 ['ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 39529 5618 HLGALLAR True NCI_RA007_Epitope_Rep3 849.51847078713 849.51736993586 29.09 2 0.00624544089369795 0.00897533461658982 0.06643995851881929 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 112834 19727 TLISELVQA True PC9_epitope_Rep6 972.5491617787198 972.54806993586 88.538 2 0.006228431156086225 0.00897533461658982 0.06646058676012918 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 45287 19985 IPVYSPLSA True PC9_epitope_Rep1 945.5171333744499 945.51602993586 81.697 2 0.006213675686760849 0.00897533461658982 0.06647848527391448 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 35605 16463 GTASGFYTV True PC9_epitope_Rep5 901.4181476091701 901.4175949679301 68.324 1 0.0062098706493497365 0.00897533461658982 0.06648310143463478 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 13958 16351 DRDGGFVL True PC9_epitope_Rep1 877.4293809992099 877.42828993586 67.715 2 0.006199349447902592 0.00897533461658982 0.0664958667670476 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 48412 21451 IYVISAETF True PC9_epitope_Rep1 1041.53826274185 1041.5371699358602 87.351 2 0.006181333121437297 0.00897533461658982 0.06651773039725836 ['ENSG00000116459|ENST00000369722|ATP5PB'] 95180 13495 RVIDREGVYEI True PC9_epitope_Rep1 1347.7146639640298 1347.71302490379 56.765 3 0.006181315164502514 0.00897533461658982 0.0665177521916436 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000533200.5_1_11:43904193-43919192:+|nuORF'] 96376 7138 RYVPRASYF True NCI_RA007_Epitope_Rep3 1157.5981776598098 1157.59654490379 35.197 3 0.00612015509880975 0.008992483894058698 0.06659201504444989 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 98278 14758 SEVILPVP True NCI_RA007_Epitope_Rep4 852.49566965388 852.4951249679301 64.222 1 0.006107870904077548 0.008992483894058698 0.06660693886165826 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 93428 4362 RQFSGARNQL True NCI_RA007_Epitope_Rep4 1175.6159529822698 1175.61484993586 23.126 2 0.006105420557739423 0.008992483894058698 0.06660991605299416 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3'] 70277 2617 LVRPPTEQA True PC9_epitope_Rep2 1009.55564414149 1009.55454993586 14.722 2 0.006082455694741248 0.008992483894058698 0.06663782365682329 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 86291 17957 QISDTSVVL True PC9_epitope_Rep3 960.51277627 960.51166993586 74.276 2 0.0060643710758612945 0.008992483894058698 0.06665980712978309 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 117936 20540 TWTEVSYTF True PC9_epitope_Rep4 1132.5076908895599 1132.5065899358601 87.157 2 0.006061317559423399 0.008992483894058698 0.06666351951675273 ['ENSG00000116663|ENST00000376753|FBXO6'] 89386 12379 QYAGKYVLF True NCI_RA007_Epitope_Rep4 1087.57023157647 1087.56912993586 54.612 2 0.006047163696336523 0.008992483894058698 0.06668072955040887 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 13937 12181 DRAGSIVL True PC9_epitope_Rep5 829.46576650793 829.46466993586 51.844 2 0.005968294151630924 0.008992483894058698 0.06677669316454195 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 84998 13103 QEFRFLPPP True NCI_RA007_Epitope_Rep4 1129.5920296502097 1129.59092993586 57.501 2 0.005961554617209403 0.008992483894058698 0.0667848984637612 ['ENSG00000113369|ENST00000265138|ARRDC3'] 65005 19065 LQIDDNVTSAV True PC9_epitope_Rep3 1173.5877321154103 1173.5866299358602 78.557 2 0.0059575798919179425 0.008992483894058698 0.0667897380149716 ['ENSG00000025772|ENST00000372813|TOMM34'] 96640 9740 SAIGLADPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 45.38 2 0.005928162309710932 0.008992483894058698 0.06682556491019923 ['ENSG00000186838|ENST00000335426|SELENOV'] 71719 9411 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 41.166 2 0.0059076458230485915 0.008992483894058698 0.06685056036367576 ['ENSG00000026025|ENST00000544301|VIM'] 126844 10071 VLQALEGLK True NCI_RA007_Epitope_Rep5 969.5858816406098 969.58478993586 45.375 2 0.005901781443271838 0.008992483894058698 0.06685770635411131 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 134728 17567 VYTSGIYNV True PC9_epitope_Rep1 1014.5022115863001 1014.50110993586 72.364 2 0.005896300493754953 0.008992483894058698 0.06686438566323227 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 140026 7460 YQEGAKMAV True PC9_epitope_Rep1 995.4746169394698 995.47350993586 33.512 2 0.005866425396106378 0.008992483894058698 0.0669008019264584 ['ENSG00000173801|ENST00000393931|JUP'] 78496 11322 NYNNQSSNFGP True PC9_epitope_Rep3 1240.51087877704 1240.50978993586 48.556 2 0.005864550454952147 0.008992483894058698 0.06690308790804077 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 24418 6971 FADENNEKL True PC9_epitope_Rep4 1078.49310345458 1078.49200993586 34.054 2 0.005861926937774803 0.008992483894058698 0.06690628667814795 ['ENSG00000065308|ENST00000182527|TRAM2'] 114368 20215 TPSIPVLTA True PC9_epitope_Rep3 897.51713337445 897.51602993586 83.015 2 0.0058498160397308825 0.008992483894058698 0.06692105466927016 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 76618 17567 NQPGVLIQV True PC9_epitope_Rep6 966.5498304850599 966.54928496793 80.212 1 0.005844128763421726 0.008992483894058698 0.06692799060264906 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 61370 24831 LITDFFWGI True PC9_epitope_Rep5 1110.57498260374 1110.57388993586 100.67 2 0.005830527180293744 0.008992483894058698 0.066944580748351 ['ENST00000487571.1_1_3:53922418-53925815:-|nuORF', 'ENSG00000113811|ENST00000495461|SELENOK'] 24556 13199 FAGM[Oxidation]PITL True H1975_Epitope_Rep3 864.44152628648 864.4409749679301 56.023 1 0.005829686830182391 0.008992483894058698 0.06694560584788999 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 24267 18239 EYTDVLQKI True PC9_epitope_Rep2 1107.58119018299 1107.58067496793 75.475 1 0.0058067301950946336 0.008992483894058698 0.06697361424223337 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENSG00000131037|ENST00000201647|EPS8L1'] 114632 19327 TQDTPIPAL True PC9_epitope_Rep5 954.5022115862998 954.5016649679301 79.385 1 0.005800000383045438 0.008992483894058698 0.06698182674399678 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 13959 16276 DRDGGFVL True PC9_epitope_Rep5 877.4293809992099 877.42828993586 67.599 2 0.005796672950535836 0.008992483894058698 0.06698588755849577 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 76527 19303 NQINGSFAL True PC9_epitope_Rep5 962.48214484806 962.48159496793 79.294 1 0.0057827967867029656 0.008992483894058698 0.06700282418643948 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 17562 9437 EHGPENIVM True PC9_epitope_Rep6 1024.46478053176 1024.4636899358602 46.529 2 0.005779050839525036 0.008992483894058698 0.06700739690119145 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 104518 18581 SQNDGFFAV True PC9_epitope_Rep6 983.4348603024699 983.43431496793 84.113 1 0.005755979281164006 0.009007196817308123 0.0670355660019899 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 23919 21841 EYLDRIGQLFF True PC9_epitope_Rep4 1399.7136013348697 1399.71250993586 92.214 2 0.005748534960773995 0.009007196817308123 0.06704465709745826 ['nc|ENSG00000239857|Q7L5D6-2|GET4', 'ENSG00000239857|ENST00000265857|GET4'] 43178 23718 IFGVIIDTF True PC9_epitope_Rep1 1023.56408356687 1023.56298993586 96.025 2 0.005748056323572518 0.009007196817308123 0.06704524164831932 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 26162 17655 FHDDSMKSFF True PC9_epitope_Rep5 1259.52810906431 1259.5264649037902 72.923 3 0.005734444231761824 0.009007196817308123 0.06706186752809257 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 104982 15208 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59449490379 63.506 3 0.005720025544136537 0.009007196817308123 0.06707948213054656 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 1318 7424 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 33.501 1 0.005707887545632388 0.009007196817308123 0.06709431335259965 ['ENSG00000012174|ENST00000379484|MBTPS2'] 86737 20700 QLLDLDPEV True PC9_epitope_Rep4 1040.5389910178399 1040.5378899358602 87.783 2 0.005704197124942654 0.009007196817308123 0.0670988231293952 ['ENSG00000113384|ENST00000265070|GOLPH3'] 2702 6374 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43270993586 29.444 2 0.005677656546301143 0.009007196817308123 0.06713126334537968 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 126445 20279 VLKVFLENV True PC9_epitope_Rep1 1059.63283183303 1059.6317299358602 82.831 2 0.005665058939858298 0.009007196817308123 0.06714666556440875 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 81787 17589 PLPPLPPPP True PC9_epitope_Rep4 923.5480395799099 923.54694993586 75.671 2 0.005654991234592496 0.009007196817308123 0.0671589766497559 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 203 18432 AAFDGGFTV True PC9_epitope_Rep6 883.4075829254699 883.40703496793 83.542 1 0.00564545223974373 0.009007196817308123 0.06717064285259466 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 95349 10755 RVVAELVSS True PC9_epitope_Rep5 958.5447451046199 958.54364993586 46.362 2 0.005619708383568997 0.009007196817308123 0.06720213558753803 ['ENSG00000116005|ENST00000433351|PCYOX1'] 91982 9814 RKQMVIDVL True NCI_RA007_Epitope_Rep4 1100.6375999436398 1100.6365099358602 44.598 2 0.005606105786395443 0.009007196817308123 0.06721878048475513 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 88889 20881 QVEEELFSV True PC9_epitope_Rep2 1078.51825557326 1078.51767496793 85.763 1 0.005602281931836559 0.009007196817308123 0.06722346015117735 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 110410 12448 TEWDDIHVV True NCI_RA007_Epitope_Rep3 1112.5138388991597 1112.51274993586 56.184 2 0.0055997498013333315 0.009007196817308123 0.06722655913566479 ['nc|ENSG00000123329|Q9BRR9-4|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-3|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-5|ARHGAP9', 'ENSG00000123329|ENST00000393791|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9|ARHGAP9'] 31327 15312 GDLGIEIPAEK True PC9_epitope_Rep4 1140.60265390356 1140.60154993586 66.83 2 0.005595411438745814 0.009007196817308123 0.0672318689648572 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 1805 10193 AEHPIVIVC True H1975_Epitope_Rep2 979.5160878286299 979.51498993586 44.212 2 0.005595286810593534 0.009007196817308123 0.06723202150521243 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276Q|1|0.1|ENSG00000150990|chr12:124977403-124977403|C/G|missense_variant'] 42962 11121 IESPPAFTA True H1975_Epitope_Rep2 931.46509780159 931.46454496793 47.812 1 0.005585136586195362 0.009007196817308123 0.06724444592807546 ['ENSG00000152382|ENST00000367874|TADA1'] 47579 12221 IVVGRITEV True PC9_epitope_Rep6 984.5967806774798 984.59568993586 58.38 2 0.005582853006182937 0.009007196817308123 0.06724724140244777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 16468 5125 EELKALAER True NCI_RA007_Epitope_Rep4 1057.5767735088898 1057.57566993586 26.228 2 0.005525488706088603 0.009007196817308123 0.06731749468528765 ['ENSG00000137628|ENST00000393743|DDX60'] 26645 19851 FIPPDGNFRL True PC9_epitope_Rep5 1174.61349337078 1174.6123899358602 81.406 2 0.005521188481072839 0.009007196817308123 0.06732276343984454 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 73913 16652 NAYTGIVLL True H1975_Epitope_Rep3 962.54368247546 962.5431349679301 69.569 1 0.005515260095237477 0.009007196817308123 0.06733002759428638 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 101667 7070 SLLVLKNQET True NCI_RA007_Epitope_Rep5 1143.6499384491499 1143.6488499358602 33.876 2 0.005513434893452669 0.009007196817308123 0.0673322641700472 ['ENST00000531832.5_1_11:27063006-27067820:+|nuORF'] 24095 17706 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5802749679299 76.13 1 0.005512633661632517 0.009007196817308123 0.06733324600635533 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 134406 23484 VYPGLAVFF True PC9_epitope_Rep2 1011.5429541994698 1011.54184993586 95.803 2 0.005488886644941502 0.009007196817308123 0.06736235092040072 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 86094 11718 QHSVPLQL True PC9_epitope_Rep4 920.50796567308 920.50686993586 52.834 2 0.005485826753843928 0.009007196817308123 0.06736610191650866 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 77564 9384 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46637496793 41.058 1 0.005474920726213608 0.009007196817308123 0.06737947250965377 ['ENSG00000204019|ENST00000371894|CT83'] 118447 16928 TYPIKTPTF True PC9_epitope_Rep1 1066.5698972233001 1066.5688099358601 69.937 2 0.005445886882271062 0.009007196817308123 0.0674150776602644 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 71113 17556 LYLLNTTKL True PC9_epitope_Rep6 1077.64339651673 1077.6422899358602 80.168 2 0.0054450930290998725 0.009007196817308123 0.0674160513962481 ['ENSG00000076242|ENST00000231790|MLH1', 'nc|ENSG00000076242|P40692-2|MLH1', 'nc|ENSG00000076242|P40692-3|MLH1'] 141594 15481 YTRELLLEL True NCI_RA007_Epitope_Rep4 1148.6441247927198 1148.64302993586 67.219 2 0.005425273063094718 0.009007196817308123 0.067440366046827 ['ENSG00000129925|ENST00000431232|PGAP6'] 26192 18575 FHDHALMII True PC9_epitope_Rep5 1095.55353596651 1095.5524299358601 76.473 2 0.005397436428057777 0.009007196817308123 0.06747452700283436 ['ENSG00000198712|ENST00000361739|MT-CO2'] 2692 13067 AESVLAVVA True H1975_Epitope_Rep3 857.4858332461699 857.48528496793 55.504 1 0.005378408415092481 0.009007196817308123 0.06749788590258059 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 89134 12288 QVRDVIIAA True PC9_epitope_Rep1 983.5763795860698 983.5758349679301 52.119 1 0.005342729122295041 0.009007196817308123 0.06754170315999812 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 130894 18209 VTDDLVCLVY True H1975_Epitope_Rep2 1138.55801221026 1138.5569099358602 75.478 2 0.005336772100407282 0.009007196817308123 0.06754902107754421 ['ENSG00000143742|ENST00000304786|SRP9'] 47239 14209 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.45752993586 59.478 2 0.0053362282531100695 0.009007196817308123 0.0675496891991049 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 48972 4004 KEEVQAGVAA True H1975_Epitope_Rep1 1000.5189242795998 1000.51782993586 20.217 2 0.0053337832903353295 0.009007196817308123 0.06755269292327294 ['ENSG00000183856|ENST00000361170|IQGAP3'] 45778 12850 ISARTTSII True PC9_epitope_Rep4 960.56039516876 960.55928993586 57.293 2 0.005329603555552615 0.009007196817308123 0.06755782812020708 ['ENSG00000215182|ENST00000621226|MUC5AC'] 35045 9415 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 41.072 2 0.005329360755102586 0.009007196817308123 0.06755812643281187 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 106794 12244 SVAEGRALMSV True PC9_epitope_Rep4 1118.5753936099 1118.5742899358602 54.913 2 0.0052724698509486086 0.009028739999106066 0.06762805303509999 ['ENST00000506965.5_1_5:176942058-176943946:-|nuORF', 'ENST00000503078.5_1_5:176938794-176943460:-|nuORF', 'ENSG00000183258|ENST00000330503|DDX41'] 76336 19431 NPTLILAA True PC9_epitope_Rep5 811.4803539429099 811.47980496793 79.792 1 0.005258353237733131 0.009028739999106066 0.06764541307062943 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 11932 16077 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.54754490379 69.774 3 0.005244984249778056 0.009028739999106066 0.06766185693797665 ['ENSG00000273749|ENST00000617928|CYFIP1'] 26543 11647 FIHQHFVEV True PC9_epitope_Rep6 1154.5872786229402 1154.5856249037902 55.926 3 0.0052351564602736225 0.009028739999106066 0.0676739471326543 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 34680 8253 GQDGQLKGF True PC9_epitope_Rep2 948.4664947839199 948.46538993586 37.103 2 0.005208735118895247 0.009047044632086852 0.06770645921870413 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 95679 16389 RYFENPQVI True PC9_epitope_Rep1 1164.5927579262 1164.5916699358602 67.863 2 0.005205233905600517 0.009047044632086852 0.06771076846596905 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 46768 22880 ITFDEIVNI True PC9_epitope_Rep5 1062.55972646242 1062.5586299358602 93.006 2 0.005189753114757572 0.009047044632086852 0.06772982460444421 ['ENSG00000197958|ENST00000361436|RPL12', 'nc|ENSG00000197958|P30050-2|RPL12'] 64765 11499 LQAELEKAV True PC9_epitope_Rep2 999.5600608155898 999.55896993586 49.554 2 0.00516566919185946 0.009047044632086852 0.06775947918335734 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'ENST00000494080.5_1_11:64109984-64120281:+|nuORF', 'nc|ENSG00000168071|A6NC98-2|CCDC88B', 'ENST00000463837.5_1_11:64107738-64120281:+|nuORF', 'ENST00000492980.1_1_11:64111011-64117377:+|nuORF', 'nc|ENSG00000168071|A6NC98-3|CCDC88B', 'ENST00000494566.5_1_11:64110218-64117194:+|nuORF'] 132943 9150 VVNPLFEK True NCI_RA007_Epitope_Rep5 944.53311779176 944.53202993586 41.844 2 0.005162454154050895 0.009047044632086852 0.06776343863751642 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 58388 7736 LENMPSAEA True H1975_Epitope_Rep2 960.4222470134399 960.42114993586 34.709 2 0.005161523457504331 0.009047044632086852 0.06776458486336906 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 82393 18524 PPLPLPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 76.277 2 0.005151754405942172 0.009047044632086852 0.06777661713686794 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 72867 11163 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45333496793 47.925 1 0.005148523482538598 0.009047044632086852 0.06778059694638058 ['ENSG00000115233|ENST00000409682|PSMD14'] 119624 9276 VATVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 41.02 2 0.005136970772379649 0.009047044632086852 0.06779482892763357 ['CON__P00761'] 133651 10111 VYANGIRNI True PC9_epitope_Rep2 1018.5559784946599 1018.55488993586 44.229 2 0.005122784602265149 0.009047044632086852 0.06781230832637031 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 72957 23020 MQDPMEIFV True PC9_epitope_Rep1 1108.49330377872 1108.49220993586 93.343 2 0.005116914355035204 0.009047044632086852 0.06781954235005905 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF'] 97092 11725 SDGVAVLKV True PC9_epitope_Rep1 886.5123823471799 886.5118349679301 49.975 1 0.005111023087997496 0.009047044632086852 0.06782680288669614 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 103386 8889 SPPIPLAK True PC9_epitope_Rep2 821.50108938749 821.49998993586 39.546 2 0.005106824485835668 0.009047044632086852 0.06783197771601178 ['ENSG00000155660|ENST00000652332|PDIA4'] 104773 15044 SQWSLQHEI True PC9_epitope_Rep2 1126.54072235334 1126.5396299358601 63.124 2 0.005072758374710837 0.009047044632086852 0.06787397609487804 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 11983 15777 DHNYQSYIL True PC9_epitope_Rep6 1151.52473793603 1151.52364993586 72.933 2 0.00506394747902582 0.009047044632086852 0.06788484192647369 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 16878 7417 EFHLNESGD True NCI_RA007_Epitope_Rep2 1046.43050319802 1046.4294099358601 33.475 2 0.0050614046773497946 0.009047044632086852 0.06788797803150112 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 87695 13622 QQYNSFVSL True NCI_RA007_Epitope_Rep3 1084.5189242796 1084.5178299358602 60.883 2 0.005059179954576549 0.009047044632086852 0.06789072193472699 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 128991 17647 VQLDPQTVGV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 75.903 2 0.005028198781320425 0.009047044632086852 0.06792894219923691 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 25340 11417 FDVSGYPTLK True NCI_RA007_Epitope_Rep2 1125.57062549929 1125.5695299358601 48.999 2 0.005024262853525615 0.009047044632086852 0.0679337990099282 ['ENSG00000155660|ENST00000652332|PDIA4'] 62478 20822 LLIENVASL True PC9_epitope_Rep4 970.5698972232999 970.56880993586 88.242 2 0.004996746639601653 0.009047044632086852 0.06796776077132899 ['nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1', 'ENST00000388829.3_1_X:13397321-13397372:-|nuORF', 'ENST00000419783.1_2_3:49395567-49395990:-|nuORF'] 121723 15996 VFLKAGASF True PC9_epitope_Rep5 938.5225531080598 938.52144993586 66.519 2 0.004980420846386008 0.009063916236912018 0.06798791711121586 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 121013 8346 VEQDQVLEA True H1975_Epitope_Rep2 1029.4978544818498 1029.4967499358602 37.055 2 0.004966825599577518 0.009063916236912018 0.06800470581555426 ['nc|ENSG00000138182|Q96Q89-4|KIF20B', 'nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-5|KIF20B'] 68415 10920 LTETVVTEY True H1975_Epitope_Rep1 1053.52300660053 1053.52190993586 46.967 2 0.004965645258482327 0.009063916236912018 0.06800616356668536 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 140642 12711 YRSEEACML True PC9_epitope_Rep5 1100.4630662795998 1100.46196993586 53.898 2 0.004953183568527358 0.009063916236912018 0.0680215555669415 ['SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion', 'nc|ENSG00000167642|O43291-2|SPINT2', 'ENSG00000167642|ENST00000301244|SPINT2', 'ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 126917 21092 VLQTVLQEV True PC9_epitope_Rep2 1027.5913609438699 1027.59026993586 86.588 2 0.004939930981241641 0.009063916236912018 0.06803792744290807 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant'] 73685 21149 MYPDVFAHF True PC9_epitope_Rep3 1125.4953523840497 1125.4942499358601 86.635 2 0.004920187062123519 0.009063916236912018 0.0680623242692191 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 20950 14760 EQPETYYKW True PC9_epitope_Rep2 1242.5557037111398 1242.55460993586 62.039 2 0.004894584700229445 0.009063916236912018 0.06809397038633992 ['ENSG00000164880|ENST00000404767|INTS1'] 96476 6450 SAAPISARV True H1975_Epitope_Rep3 870.49231560894 870.49120993586 29.784 2 0.004872939500053027 0.009063916236912018 0.06812073421829917 ['ENSG00000233436|ENST00000422652|BTBD18'] 40552 8725 HRFPTVAV True PC9_epitope_Rep6 925.5133854066898 925.5122899358599 43.424 2 0.004837309157135364 0.009063916236912018 0.06816480837323202 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 118172 13665 TYISRSFQV True PC9_epitope_Rep4 1099.56620882519 1099.5651099358602 60.454 2 0.004832711958543913 0.009063916236912018 0.06817049666363272 ['ENSG00000154127|ENST00000284273|UBASH3B'] 136869 9654 YADVGGKQF True PC9_epitope_Rep3 983.47124581119 983.47014993586 42.082 2 0.004819003337469597 0.009063916236912018 0.06818746107980632 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 17346 5460 EHDAAAESL True PC9_epitope_Rep3 941.4090394774499 941.40794993586 26.078 2 0.004818132213359791 0.009063916236912018 0.06818853920773431 ['SIKE1|p.A49Gfs*13|1|0.06|ENSG00000052723|chr1:114780462-114780462|G/-|frameshift_variant', 'ENST00000506320.1_1_1:115321857-115323228:-|nuORF', 'ENST00000474562.1_1_1:115321817-115323228:-|nuORF', 'ENST00000475335.5_1_1:115321747-115323228:-|nuORF', 'ENSG00000052723|ENST00000060969|SIKE1', 'nc|ENSG00000052723|Q9BRV8-2|SIKE1'] 142905 21087 YYVGGEIVTI True PC9_epitope_Rep2 1112.57537652656 1112.5748749679299 86.568 1 0.004817106996249063 0.009063916236912018 0.06818980806267885 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 42961 11118 IESPPAFTA True H1975_Epitope_Rep2 931.46509780159 931.46400993586 47.8 2 0.004815870193704586 0.009063916236912018 0.0681913388099717 ['ENSG00000152382|ENST00000367874|TADA1'] 48378 12384 IYTNLNQKI True PC9_epitope_Rep3 1105.61315901761 1105.61206993586 52.665 2 0.00480132248105052 0.009063916236912018 0.06820934603061231 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 1991 6115 AEIPETSNA True H1975_Epitope_Rep2 930.4294405688601 930.42834993586 28.5 2 0.004797082983200964 0.009063916236912018 0.06821459440151653 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 128746 5111 VPYGVGKAA True PC9_epitope_Rep6 860.4756029156398 860.4745099358599 27.343 2 0.00479527191573429 0.009063916236912018 0.06821683654524534 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 70166 22467 LVPSDFLSV True PC9_epitope_Rep3 975.52769805815 975.52660993586 91.696 2 0.0047889590248978335 0.009063916236912018 0.06822465250353922 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 121986 19032 VFTYVGALF True NCI_RA007_Epitope_Rep4 1015.5378688190298 1015.53676993586 82.329 2 0.004766543566873795 0.009063916236912018 0.06825241064891585 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 65593 8403 LRVQADSL True PC9_epitope_Rep2 900.5028802926399 900.50178993586 37.693 2 0.004753364021586333 0.009063916236912018 0.06826873565522287 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15'] 27647 20128 FPFAPPAAA True PC9_epitope_Rep2 887.4541391950698 887.45304993586 82.833 2 0.004742970229464527 0.009063916236912018 0.06828161221554054 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 39231 17342 HIIENIVAV True PC9_epitope_Rep2 1006.58113061334 1006.58057496793 71.959 1 0.0047321930121730854 0.009063916236912018 0.06829496580292099 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 107708 7610 SVSDGIHSV True PC9_epitope_Rep1 899.4348603024702 899.43376993586 34.092 2 0.0047076565738120475 0.009063916236912018 0.06832537549588447 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 140548 5517 YRPGTVALR True PC9_epitope_Rep4 1031.5876129761098 1031.58650993586 27.981 2 0.004701214671017205 0.009063916236912018 0.0683333611493532 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 88634 5354 QTEERVQPEY True H1975_Epitope_Rep3 1277.58879474457 1277.58768993586 25.664 2 0.00469206373817627 0.009063916236912018 0.06834470628957343 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 764 13942 AAVPRAAFL True PC9_epitope_Rep4 914.5337864980999 914.53268993586 61.532 2 0.004684221541110479 0.009063916236912018 0.06835443006194625 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 71996 5508 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 26.238 1 0.00467980846491903 0.009063916236912018 0.06835990244313768 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 90757 3620 RERRDNYVP True NCI_RA007_Epitope_Rep4 1203.6108676018298 1203.60922490379 19.992 3 0.0046638716907125835 0.00910531366466558 0.06837966750772591 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 111812 23639 TILPAIILV True PC9_epitope_Rep3 951.63685458431 951.63574993586 96.215 2 0.004648616210195271 0.00910531366466558 0.0683985918204609 ['ENSG00000198712|ENST00000361739|MT-CO2'] 2472 4447 AEQLRDEEVHA True H1975_Epitope_Rep3 1295.6105928183101 1295.6089349037902 22.228 3 0.00462493216030823 0.00910531366466558 0.0684279798540434 ['ENSG00000149257|ENST00000358171|SERPINH1'] 124813 11332 VHGPPVQL True PC9_epitope_Rep1 845.47593726881 845.47484993586 48.468 2 0.0046211175619983455 0.00910531366466558 0.06843271407299498 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 103099 14740 SPHGIIVIA True PC9_epitope_Rep1 905.5334521449299 905.53234993586 61.516 2 0.004618747320324694 0.00910531366466558 0.06843565586028019 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 97327 3697 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41302993586 18.698 2 0.004598648365299064 0.00910531366466558 0.06846060534240189 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 3610 6235 AGPASVPLR True NCI_RA007_Epitope_Rep2 866.4974009893799 866.49630993586 28.86 2 0.004586374642415202 0.00910531366466558 0.06847584461985434 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 17766 5090 EHSKPVVL True PC9_epitope_Rep3 907.5127167003499 907.51160993586 24.664 2 0.004584575096978229 0.00910531366466558 0.06847807919184264 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000557024.1_1_14:64625447-64629048:+|nuORF'] 31871 4573 GELKTQMTSA True NCI_RA007_Epitope_Rep3 1064.51721002744 1064.5161099358602 24.874 2 0.00457210750652148 0.00910531366466558 0.06849356229935787 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 98275 8839 SEVGKLLSA True H1975_Epitope_Rep3 902.50729696674 902.50618993586 39.007 2 0.004557029735582176 0.00910531366466558 0.06851229057606247 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF', 'WDR54|p.A261T|1|0.05|ENSG00000005448|chr2:74425220-74425220|G/A|missense_variant'] 113603 21643 TLVGVFTITL True PC9_epitope_Rep2 1062.6324974798601 1062.6314099358601 88.724 2 0.004556187494706339 0.00910531366466558 0.0685133368518029 ['ENSG00000173175|ENST00000462833|ADCY5', 'nc|ENSG00000173175|O95622-2|ADCY5'] 100938 8166 SLFGSPVAK True NCI_RA007_Epitope_Rep3 904.50181766348 904.50072993586 39.24 2 0.004538176585626568 0.00910531366466558 0.06853571394623417 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 108061 9868 SYAMANTGI True NCI_RA007_Epitope_Rep3 926.41676771018 926.41566993586 45.889 2 0.004529814364718913 0.00910531366466558 0.06854610527608844 ['ENSG00000134294|ENST00000256689|SLC38A2', 'ENSG00000139209|ENST00000266579|SLC38A4'] 119245 21398 VALGALVTV True PC9_epitope_Rep5 841.52730413533 841.52620993586 87.369 2 0.004529466101072748 0.00910531366466558 0.06854653807337706 ['ENSG00000129473|ENST00000250405|BCL2L2'] 36520 6038 GVGPVPARA True PC9_epitope_Rep3 822.47118624154 822.47008993586 28.277 2 0.0045219803937594305 0.00910531366466558 0.06855584129610479 ['ENSG00000129636|ENST00000320640|ITFG1'] 24553 13236 FAGM[Oxidation]PITL True H1975_Epitope_Rep1 864.44152628648 864.4409749679301 56.01 1 0.004507422926293203 0.00910531366466558 0.06857393612406074 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 98297 15902 SEVPSFLV True H1975_Epitope_Rep2 876.45928414516 876.45873496793 66.368 1 0.00448971321482091 0.009127426913635349 0.06859595421817202 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 71871 4400 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 22.034 2 0.004475841281269465 0.009147906021999599 0.06861320475907104 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 70499 11075 LVVSTQTALA True NCI_RA007_Epitope_Rep1 1001.5757108797299 1001.5746099358599 47.076 2 0.004474015720932602 0.009147906021999599 0.06861547520077678 ['CON__P02769'] 89770 5921 RAIEALHGHEL True NCI_RA007_Epitope_Rep4 1244.6625688215202 1244.66092490379 29.396 3 0.004472286758626842 0.009147906021999599 0.06861762555823364 ['nc|ENSG00000239306|Q96PK6-5|RBM14', 'nc|ENSG00000239306|Q96PK6-3|RBM14', 'nc|ENSG00000239306|Q96PK6-4|RBM14', 'ENST00000511114.1_1_11:66384104-66406046:+|nuORF', 'nc|ENSG00000239306|Q96PK6-2|RBM14', 'ENST00000512283.1_1_11:66384104-66384788:+|nuORF', 'ENSG00000239306|ENST00000310137|RBM14'] 88586 14093 QTDNIIYVY True H1975_Epitope_Rep2 1127.5498900547097 1127.5487899358602 59.363 2 0.004417824886506048 0.009147906021999599 0.06868538832046421 ['ENSG00000138002|ENST00000260570|IFT172', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'IFT172|p.D862Gfs*10|1|0.15|ENSG00000138002|chr2:27459766-27459767|-/C|frameshift_variant', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 45631 19862 IRDNFVIVY True PC9_epitope_Rep1 1137.61824439805 1137.61767496793 81.216 1 0.00441598114900563 0.009147906021999599 0.06868768326044006 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 137152 21993 YAVELFEGL True PC9_epitope_Rep4 1039.5226126777097 1039.5215099358602 92.816 2 0.0043913563744514455 0.009147906021999599 0.06871834001329793 ['BCAT1|p.K99Rfs*6|1|0.3|ENSG00000060982|chr12:24881395-24881395|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 7838 20267 [Acetylation]-ASVSELAC[Carbamidomethyl]IY True H1975_Epitope_Rep1 1153.53252633414 1153.5314299358602 84.304 2 0.00438259436507163 0.009147906021999599 0.06872925091335962 ['nc|ENSG00000137818|P05386-2|RPLP1', 'ENSG00000137818|ENST00000260379|RPLP1', 'ENST00000487304.6_1_15:69745218-69746066:+|nuORF'] 410 18853 AALGPGVLAV True PC9_epitope_Rep4 866.5225531080599 866.52144993586 80.604 2 0.0043747823154115266 0.009147906021999599 0.06873898002023349 ['ENSG00000275183|ENST00000611161|LENG9', 'nc|ENSG00000275183|Q96B70|LENG9'] 133176 12333 VVRNEQVEI True PC9_epitope_Rep4 1084.58767254576 1084.58656993586 55.248 2 0.004373764768796644 0.009147906021999599 0.06874024734966809 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 2721 11551 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.4801949679301 49.417 1 0.004329370973062323 0.009170013386880857 0.06879555656769346 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 37038 10036 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 43.595 2 0.004272389500498633 0.009191709613368137 0.06886659958780575 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 2542 14872 AEQPWPPLPA True H1975_Epitope_Rep2 1104.56039516876 1104.55928993586 62.357 2 0.004264415555178675 0.009191709613368137 0.06887654587891963 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 114831 8451 TQLQTTQSV True PC9_epitope_Rep3 1004.5138388991599 1004.51274993586 37.471 2 0.0042598597372368084 0.009191709613368137 0.06888222907814287 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 85166 5404 QENTQTPTV True H1975_Epitope_Rep1 1016.47745339044 1016.47634993586 25.843 2 0.0042451291330197 0.009212991880074952 0.06890060742750517 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 48266 8191 IYQRDPLKL True NCI_RA007_Epitope_Rep4 1144.6604435631998 1144.65880490379 38.294 3 0.0041183552525453585 0.009212991880074952 0.069058933192183 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 13936 12153 DRAGSIVL True PC9_epitope_Rep5 829.46576650793 829.46521496793 51.736 1 0.0041052855599101965 0.009212991880074952 0.06907527189786368 ['ENSG00000162704|ENST00000359856|ARPC5', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 24694 20695 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.54184993586 85.71 2 0.0040734216363045635 0.009212991880074952 0.0691151183631564 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 57611 7761 LEEDHACIP True H1975_Epitope_Rep1 1025.4487961144498 1025.4476899358601 34.81 2 0.0040711801591271956 0.009212991880074952 0.0691179220519446 ['ENSG00000167658|ENST00000309311|EEF2'] 15439 18440 EALFQPSFL True H1975_Epitope_Rep1 1050.53859709502 1050.53807496793 76.868 1 0.004058873832032607 0.00925100312082033 0.06913331666206479 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 96067 14041 RYLTVAAVF True NCI_RA007_Epitope_Rep2 1038.5862159937797 1038.5851099358601 59.274 2 0.004031142756596486 0.00925100312082033 0.06916801671329771 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 16947 7782 EFSGNPIK True PC9_epitope_Rep1 890.4497820906199 890.44868993586 34.757 2 0.004019848336326725 0.00925100312082033 0.0691821533916852 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 106047 9136 STAAKIMGV True PC9_epitope_Rep4 876.4738886634799 876.47278993586 42.732 2 0.004006274076840596 0.00925100312082033 0.06919914662656373 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 9871 11592 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51257496793 52.347 1 0.003999012076447244 0.00925100312082033 0.0692082390625848 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 103089 21270 SPGTALILLEA True PC9_epitope_Rep4 1083.61757569171 1083.61707496793 89.984 1 0.003993665058975725 0.00925100312082033 0.06921493442915809 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 55019 7587 KYQRILERL True NCI_RA007_Epitope_Rep4 1217.72444080209 1217.72278490379 35.833 3 0.0039878588576279135 0.00925100312082033 0.06922220534540016 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1'] 31532 13432 GEDPITFAP True H1975_Epitope_Rep2 945.4443623570099 945.44381496793 56.8 1 0.003984458684320914 0.00925100312082033 0.06922646354886457 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12', 'ENST00000481154.1_1_7:77214868-77221624:+|nuORF', 'ENST00000494248.1_1_7:77214868-77230160:+|nuORF', 'PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion'] 106710 18584 STVEALQNL True PC9_epitope_Rep5 973.50802524273 973.50692993586 76.508 2 0.003970854598095151 0.00925100312082033 0.0692435026629211 ['nc|ENSG00000143401|Q9BTT0-3|ANP32E', 'ENSG00000143401|ENST00000583931|ANP32E'] 26438 18530 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.46017496793 76.064 1 0.003970158176148471 0.00925100312082033 0.06924437501951045 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 33301 4620 GKPKITQSL True NCI_RA007_Epitope_Rep4 970.5811306133401 970.58002993586 24.186 2 0.003964854271888818 0.00925100312082033 0.06925101911275691 ['nc|ENSG00000066294|Q9UIB8-7|CD84', 'nc|ENSG00000066294|Q9UIB8-6|CD84', 'ENST00000368047.3_1_1:160523601-160549236:-|nuORF', 'nc|ENSG00000066294|Q9UIB8-5|CD84', 'nc|ENSG00000066294|Q9UIB8-4|CD84', 'ENST00000360056.7_1_1:160523087-160549236:-|nuORF', 'ENSG00000066294|ENST00000368054|CD84', 'nc|ENSG00000066294|Q9UIB8-2|CD84', 'nc|ENSG00000066294|Q9UIB8|CD84'] 806 4606 AAYNRYFRK True NCI_RA007_Epitope_Rep4 1187.6199757335496 1187.6183249037902 24.13 3 0.003963611535414111 0.00925100312082033 0.06925257593566238 ['ENSG00000111341|ENST00000539261|MGP', 'nc|ENSG00000111341|P08493-2|MGP'] 87657 9025 QQSELQSQV True PC9_epitope_Rep3 1045.5040024914501 1045.50290993586 39.657 2 0.0039464612158022355 0.00925100312082033 0.06927406358580857 ['ENSG00000002834|ENST00000318008|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1', 'nc|ENSG00000078114|O76041-2|NEBL'] 110960 7286 THAGAHLDL True PC9_epitope_Rep5 933.4668291370899 933.4657299358599 32.99 2 0.003923624732419642 0.00925100312082033 0.06930268353348842 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 130805 10582 VTANTMENV True PC9_epitope_Rep3 977.44879611445 977.44768993586 45.65 2 0.003921079220392455 0.00925100312082033 0.06930587428338442 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant'] 96462 13814 SAAMPGASL True PC9_epitope_Rep3 803.38473930591 803.38364993586 58.214 2 0.003905492461587397 0.00925100312082033 0.06932541448967934 ['ENSG00000086062|ENST00000379731|B4GALT1'] 85404 6073 QEVPGPAAA True H1975_Epitope_Rep2 838.4184819623398 838.41793496793 28.337 1 0.003896842369618172 0.00925100312082033 0.06933626046283967 ['ENSG00000146278|ENST00000336032|PNRC1'] 106873 13581 SVDDGITLY True H1975_Epitope_Rep2 981.46549172441 981.46494496793 57.375 1 0.0038967620014693145 0.00925100312082033 0.06933636123918142 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 85402 5541 QEVPGPAA True H1975_Epitope_Rep2 767.3813681776298 767.3808149679301 26.321 1 0.0038855042299165113 0.00925100312082033 0.06935047887226446 ['ENSG00000146278|ENST00000336032|PNRC1'] 5973 11571 APHPPLSVV True PC9_epitope_Rep4 915.51780208079 915.51670993586 52.267 2 0.003881667313648795 0.00925100312082033 0.06935529101115745 ['ENSG00000183856|ENST00000361170|IQGAP3'] 35539 4739 GSSSVILEK True NCI_RA007_Epitope_Rep5 918.5022115863 918.50110993586 24.912 2 0.003869681940967693 0.00925100312082033 0.06937032436850817 ['ENSG00000177409|ENST00000318238|SAMD9L'] 111613 15651 TIDNFTHGL True PC9_epitope_Rep5 1016.49270953176 1016.49160993586 65.213 2 0.0038679201715937964 0.00925100312082033 0.06937253438605866 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 28764 12555 FSSSAGPGL True PC9_epitope_Rep5 821.3919328613299 821.39082993586 53.292 2 0.0038606691496756887 0.00925100312082033 0.06938163087024447 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 9096 22455 AVIGGLVYL True PC9_epitope_Rep1 903.5429541994699 903.54184993586 91.181 2 0.003849461210143331 0.00925100312082033 0.06939569318540903 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 37116 13407 GVPTKVFNV True PC9_epitope_Rep4 959.5440168286299 959.54290993586 59.472 2 0.003848524297666548 0.00925100312082033 0.06939686880650556 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 75052 12042 NHTALTVVM True PC9_epitope_Rep4 984.5062514209201 984.50514993586 54.126 2 0.003806246031189739 0.00925100312082033 0.06944993503669544 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 2892 8087 AEVRVIAPP True NCI_RA007_Epitope_Rep4 950.5549158654998 950.55380993586 37.892 2 0.0038024215330052496 0.00925100312082033 0.06945473698054677 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 5784 6295 APDEKYVAA True PC9_epitope_Rep5 962.4709114580199 962.46980993586 29.189 2 0.003767199475743057 0.00925100312082033 0.06949897311914638 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 98211 5249 SETKNPPIP True H1975_Epitope_Rep2 981.5131106231698 981.51200993586 25.256 2 0.0037354676087255198 0.00925100312082033 0.0695388447150346 ['LTR12C_dup1156|chr6:63273974-63275493:-|1.1245883398790455|0.0455730948213315|4.63|468.0|39|3|sense'] 133855 14095 VYGPLPQSF True NCI_RA007_Epitope_Rep4 1006.5123823471798 1006.51128993586 61.497 2 0.0037308700466200852 0.00925100312082033 0.06954462310809348 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 61261 21107 LIPDIDLKL True PC9_epitope_Rep1 1038.63249747986 1038.6314099358601 86.016 2 0.003724901016688401 0.00925100312082033 0.06955212577481544 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 22290 11639 ETDGDMLGY True H1975_Epitope_Rep2 999.3855271515499 999.38497496793 49.84 1 0.0036958198012739733 0.00925100312082033 0.06958868794720131 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'ENSG00000134313|ENST00000256707|KIDINS220', 'nc|ENSG00000134313|Q9ULH0-2|KIDINS220', 'ENST00000488729.5_1_2:8870852-8965899:-|nuORF', 'KIDINS220|p.A448Qfs*32|1|0.12|ENSG00000134313|chr2:8791159-8791159|C/-|frameshift_variant', 'KIDINS220|p.K576Nfs*2|1|0.13|ENSG00000134313|chr2:8788706-8788706|T/-|frameshift_variant', 'nc|ENSG00000134313|Q9ULH0-3|KIDINS220'] 47373 16333 IVIDPKNPL True PC9_epitope_Rep5 1007.60153170475 1007.60042993586 67.822 2 0.0036553325529050554 0.00927267458707621 0.06963961530017995 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 122337 16708 VGDAIPAVEVF True H1975_Epitope_Rep1 1115.58627556343 1115.5857749679299 69.663 1 0.0036546517793929535 0.00927267458707621 0.06964047186798075 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5'] 2704 6480 AETAAVTVA True H1975_Epitope_Rep3 831.43379767331 831.43270993586 29.893 2 0.003649567738827562 0.00927267458707621 0.06964686900687979 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 435 19724 AALPNVYEV True PC9_epitope_Rep2 974.5072969667399 974.5067449679301 81.258 1 0.0036271666374891823 0.009294343155173182 0.06967506130143951 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 111478 8377 THVGPTPAI True PC9_epitope_Rep2 891.48141657207 891.48030993586 37.595 2 0.003609623313989346 0.009294343155173182 0.0696971461992076 ['ENSG00000157259|ENST00000287957|GATAD1'] 73288 15546 MTDGFQFEY True H1975_Epitope_Rep2 1136.44846176128 1136.44736993586 64.953 2 0.003596587009942753 0.009294343155173182 0.06971356085367403 ['ENSG00000108821|ENST00000225964|COL1A1'] 41531 19027 HYPPVQVLF True PC9_epitope_Rep4 1098.58621599378 1098.5851099358601 81.277 2 0.0035262385104647535 0.009309991536371331 0.06980219226654598 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 39245 15599 HIIENIVAV True PC9_epitope_Rep6 1006.58113061334 1006.58057496793 72.208 1 0.0035221040047678028 0.009309991536371331 0.06980740402920196 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 96074 20223 RYLTVAAVF True PC9_epitope_Rep3 1038.5862159937797 1038.5851099358601 83.048 2 0.003513364577713493 0.009309991536371331 0.06981842153872694 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 111587 21831 TIDDGIFEV True PC9_epitope_Rep5 1007.48114178855 1007.48004993586 89.005 2 0.003497405168045524 0.009309991536371331 0.0698385445491652 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 27185 20085 FLLPHPGLQV True PC9_epitope_Rep2 1119.6440652230701 1119.64296993586 82.665 2 0.0034959705188279053 0.009309991536371331 0.06984035370147616 ['ENSG00000184743|ENST00000398868|ATL3'] 120660 7639 VEILANDQGNR True PC9_epitope_Rep3 1227.6207635791898 1227.6191249037902 34.382 3 0.003478476363302899 0.009309991536371331 0.06986241750401083 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 64901 13966 LQEDPPVGV True PC9_epitope_Rep2 952.4865615221598 952.48546993586 58.994 2 0.003466122389542485 0.009309991536371331 0.06987800173798543 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 132488 10004 VVDGTPLVA True NCI_RA007_Epitope_Rep4 869.4858332461699 869.48528496793 45.324 1 0.00346040767328611 0.009309991536371331 0.06988521163041671 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 1212 7633 AEDDLNTVA True H1975_Epitope_Rep3 946.42435518842 946.4238049679301 34.342 1 0.0034524632105227843 0.009309991536371331 0.06989523561685428 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 6695 18076 AQAGALLQV True PC9_epitope_Rep1 869.49706663621 869.49651496793 74.322 1 0.0034491562744381307 0.009309991536371331 0.0698994084996494 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 69884 22097 LVIGQFLEA True PC9_epitope_Rep2 988.5593325395998 988.55822993586 90.468 2 0.0034477266836652385 0.009309991536371331 0.0699012125000253 ['ENST00000596386.1_1_19:40477100-40485896:+|nuORF', 'ENST00000593455.5_1_19:40477100-40486089:+|nuORF', 'nc|ENSG00000013275|P43686-2|PSMC4', 'ENSG00000013275|ENST00000157812|PSMC4', 'ENST00000601697.5_1_19:40477100-40486546:+|nuORF'] 107479 12008 SVMRLTISY True NCI_RA007_Epitope_Rep5 1068.56376629704 1068.5626699358602 52.849 2 0.003440818821038015 0.009309991536371331 0.06990993004317365 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 78847 19566 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.42140993586 80.086 2 0.0034402596260966916 0.009309991536371331 0.06991063576980693 ['ENSG00000163807|ENST00000296121|KIAA1143'] 122392 6976 VGDPHTVTV True PC9_epitope_Rep2 923.47124581119 923.47014993586 32.23 2 0.003437038674298985 0.009309991536371331 0.06991470084957163 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 45558 6054 IQRTPKIQVYS True NCI_RA007_Epitope_Rep3 1331.75613485319 1331.7550299358602 30.793 2 0.0034238158102945196 0.009309991536371331 0.06993139101791855 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 90754 2606 RERRDNYVP True NCI_RA007_Epitope_Rep3 1203.6108676018298 1203.60922490379 14.725 3 0.003405686330855596 0.009309991536371331 0.06995427947356189 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 24414 15941 FADDMYSLY True H1975_Epitope_Rep3 1123.45321278855 1123.45210993586 66.77 2 0.0033937759874261187 0.009309991536371331 0.06996931945781991 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 76597 19132 NQMDGFDTL True PC9_epitope_Rep4 1039.4280606698699 1039.4269699358601 81.684 2 0.003393102131933494 0.009309991536371331 0.06997017045551214 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 77884 8267 NVHAVFQEA True PC9_epitope_Rep6 1013.4930438849299 1013.49194993586 41.402 2 0.0033922453657548777 0.009309991536371331 0.0699712524588686 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 100492 22436 SLAQYLINV True PC9_epitope_Rep1 1019.5651461960299 1019.5645749679301 91.122 1 0.003384611955574503 0.009309991536371331 0.06998089321008333 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 133974 9144 VYIPSKTDL True NCI_RA007_Epitope_Rep4 1034.5648118428599 1034.56370993586 42.013 2 0.00337568544178542 0.009309991536371331 0.06999216842506491 ['ENSG00000145912|ENST00000274606|NHP2'] 71733 10294 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42662993586 44.648 2 0.003375021753982457 0.009309991536371331 0.06999300679584378 ['ENSG00000026025|ENST00000544301|VIM'] 60965 16840 LIDQKVYEL True PC9_epitope_Rep5 1119.61757569171 1119.61646993586 69.785 2 0.0033587512747664124 0.009309991536371331 0.0700135621259665 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF'] 128820 9748 VQASHFEGL True PC9_epitope_Rep6 986.4821448480599 986.48104993586 47.918 2 0.0033355034449559385 0.009309991536371331 0.07004294047820514 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 114900 15460 TQSELATAL True PC9_epitope_Rep5 932.4814761417199 932.48092496793 64.477 1 0.0033300886820908835 0.009309991536371331 0.070049784511864 ['ENSG00000138629|ENST00000395081|UBL7'] 47806 21000 IYGEGFQTW True PC9_epitope_Rep5 1099.4974605590298 1099.49687496793 85.839 1 0.003325842249140849 0.009309991536371331 0.0700551521906361 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 139436 21131 YLPPGFLSA True PC9_epitope_Rep3 963.50656869075 963.50546993586 86.564 2 0.003297172324874001 0.009309991536371331 0.07009140064306008 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 114514 12156 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 51.622 2 0.0032953559962446565 0.009309991536371331 0.07009369758799056 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 28161 14569 FRDNSTVL True PC9_epitope_Rep1 950.48214484806 950.48104993586 60.864 2 0.003294440027189942 0.009309991536371331 0.07009485595268293 ['nc|ENSG00000198298|Q8NCK3-2|ZNF485', 'ENSG00000198298|ENST00000361807|ZNF485'] 2703 6484 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43270993586 29.857 2 0.0032924463777996155 0.009309991536371331 0.07009737723914299 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 22887 19636 EVDPSDWIGLY True H1975_Epitope_Rep1 1292.5924831426798 1292.5913899358602 81.742 2 0.0032609391532918944 0.009309991536371331 0.0701372325308742 ['ENSG00000138411|ENST00000644978|HECW2'] 72011 6259 METAAAVAA True NCI_RA007_Epitope_Rep3 833.3953039896098 833.39420993586 31.622 2 0.003237532307826386 0.009309991536371331 0.07016685263726731 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 75630 13560 NLEEISNYY True H1975_Epitope_Rep2 1143.50841916555 1143.50732993586 57.296 2 0.003195973320683478 0.00937513917961965 0.07021946735545387 ['ENSG00000130119|ENST00000360845|GNL3L'] 121344 4864 VEVESRNSPE True H1975_Epitope_Rep3 1144.53603089572 1144.5349299358602 23.835 2 0.00318580624299754 0.00937513917961965 0.07023234381586975 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 127345 23851 VMPSSFFLL True PC9_epitope_Rep1 1039.5412399473098 1039.5401499358602 96.542 2 0.0031848265947496917 0.00937513917961965 0.07023358462385297 ['ENSG00000143155|ENST00000367833|TIPRL'] 76573 22113 NQLDSLMGL True PC9_epitope_Rep5 989.48518162317 989.4846349679301 90.092 1 0.003173964460434099 0.00937513917961965 0.07024734358873197 ['ENSG00000135148|ENST00000412615|TRAFD1'] 89027 21573 QVLEDFPTI True PC9_epitope_Rep2 1060.54407639828 1060.5429699358601 88.452 2 0.003168413260397446 0.00937513917961965 0.0702543760543171 ['nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1'] 29698 21272 FVLPILQKL True PC9_epitope_Rep4 1069.68995278633 1069.6888499358602 89.992 2 0.0031620588237663977 0.00937513917961965 0.07026242676394322 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 24495 13878 FAENNFTEL True NCI_RA007_Epitope_Rep5 1083.48728979815 1083.48618993586 60.058 2 0.0031498344204123605 0.00937513917961965 0.07027791641149145 ['ENSG00000066336|ENST00000378538|SPI1', 'nc|ENSG00000066336|P17947-2|SPI1'] 46870 20132 ITLDGGAIYEA True PC9_epitope_Rep1 1121.5604547384098 1121.5593499358602 82.268 2 0.003098244574362802 0.00937513917961965 0.07034331569810673 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF', 'ENST00000473501.1_1_3:196753297-196754890:-|nuORF'] 61736 17715 LLAESVTEV True PC9_epitope_Rep2 959.5175272972699 959.51642993586 73.422 2 0.0030280297464227914 0.009394688216567599 0.07043240171126826 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 57357 13510 LEAHFVPLV True H1975_Epitope_Rep2 1023.5753169569099 1023.57420993586 57.101 2 0.0030050059833669025 0.009394688216567599 0.07046163256891258 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 48413 21379 IYVISAETF True PC9_epitope_Rep5 1041.53826274185 1041.5371699358602 87.295 2 0.002999247463151142 0.009394688216567599 0.07046894503679017 ['ENSG00000116459|ENST00000369722|ATP5PB'] 2117 11114 AELLANVA True H1975_Epitope_Rep2 799.44396843419 799.44341496793 47.786 1 0.002988927625159857 0.009394688216567599 0.07048205118310807 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 98898 10193 SGYLLPDTK True PC9_epitope_Rep6 992.51786165044 992.51676993586 49.849 2 0.0029857217419045536 0.009394688216567599 0.07048612302683642 ['ENSG00000166598|ENST00000299767|HSP90B1'] 70302 17347 LVSDSALYF True H1975_Epitope_Rep2 1013.50696261357 1013.50637496793 72.02 1 0.0029686399357954324 0.009394688216567599 0.07050782199488452 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 24372 18593 FAADIISVL True NCI_RA007_Epitope_Rep4 947.53278343859 947.53168993586 80.425 2 0.002964767641776704 0.009394688216567599 0.0705127416826245 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 142517 11717 YYINGKTGL True PC9_epitope_Rep2 1027.53384606775 1027.53274993586 50.401 2 0.002958367415948538 0.009394688216567599 0.07052087365408682 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 106219 18498 STEDIHCLIP True H1975_Epitope_Rep2 1126.53286009158 1126.5317699358602 76.755 2 0.0029513009815646594 0.009394688216567599 0.07052985294319175 ['ENST00000549034.1_1_12:56383771-56384735:+|nuORF'] 111387 11010 THSDQFLVA True PC9_epitope_Rep4 1016.4927095317599 1016.49160993586 50.127 2 0.0029351551566695285 0.009394688216567599 0.07055037272130134 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C'] 46801 10331 ITGTASTILY True H1975_Epitope_Rep1 1038.55972646242 1038.5586299358602 44.686 2 0.0029238036116381204 0.009394688216567599 0.07056480222047128 ['ENSG00000125304|ENST00000376387|TM9SF2'] 89257 13502 QVVGKLIEV True PC9_epitope_Rep6 983.6015317047498 983.60042993586 63.645 2 0.002895110320392814 0.009394688216567599 0.07060128591067004 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 48825 7361 KDSPSVWAA True H1975_Epitope_Rep3 959.4712458111899 959.47014993586 33.289 2 0.0028923310549035307 0.009394688216567599 0.07060482054412592 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 8002 17377 ATDIPCLLY True H1975_Epitope_Rep2 1007.4997690581499 1007.49866993586 72.133 2 0.0028725199947838907 0.00943900267141585 0.07063001998676298 ['ENSG00000135249|ENST00000257700|RINT1', 'ENST00000474123.1_1_7:105190513-105195680:+|nuORF'] 4790 17207 ALDVVNLVY True H1975_Epitope_Rep2 1004.55424715916 1004.55314993586 71.477 2 0.0028286460165117596 0.009458527140409054 0.07068585213757683 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 5060 22058 ALLAYTLGV True PC9_epitope_Rep5 919.5378688190299 919.53676993586 89.874 2 0.0028169132185553976 0.009458527140409054 0.07070078862202898 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF'] 110011 6143 TEISTKEVP True H1975_Epitope_Rep2 1002.5233409536999 1002.52224993586 28.606 2 0.002815984339005319 0.009458527140409054 0.07070197124083714 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 98082 9524 SERELAALV True H1975_Epitope_Rep2 986.5396597241798 986.53856993586 41.605 2 0.0028128828374864964 0.009458527140409054 0.07070592008194111 ['ENSG00000261308|ENST00000618634|FIGNL2'] 47987 19671 IYKIDFVRF True PC9_epitope_Rep2 1199.6702799709099 1199.66863490379 81.051 3 0.0028113160095009967 0.009458527140409054 0.07070791503740383 ['nc|ENSG00000109103|Q13432-2|UNC119', 'ENSG00000109103|ENST00000335765|UNC119'] 88211 8189 QSAEELLAQ True H1975_Epitope_Rep2 987.4872897981497 987.48674496793 36.451 1 0.002805598965357666 0.009458527140409054 0.0707151946056703 ['CCDC150|p.Q273E|1|0.2|ENSG00000144395|chr2:196666773-196666773|C/G|missense_variant'] 117998 17874 TYDRVESLF True PC9_epitope_Rep4 1128.54513902744 1128.5440499358601 76.791 2 0.00280359945533878 0.009458527140409054 0.07071774073918013 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 132688 4389 VVGVGMTK True NCI_RA007_Epitope_Rep3 789.44186025921 789.44076993586 24.039 2 0.002801073207889419 0.009458527140409054 0.0707209577110612 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 72215 14349 MHAGSLLL True PC9_epitope_Rep4 840.45275929608 840.45166993586 63.1 2 0.002789632229669555 0.009458527140409054 0.07073552829940478 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'RANBP2|p.L369Kfs*5|1|0.07|ENSG00000153201|chr2:108748957-108748958|TT/-|frameshift_variant', 'RGPD4|p.V610Ffs*5|1|0.07|ENSG00000196862|chr2:107860831-107860831|G/-|frameshift_variant', 'RGPD4|p.M814Ifs*6|1|0.37|ENSG00000196862|chr2:107863005-107863005|G/-|frameshift_variant', 'RGPD3|p.H839Ifs*29|1|0.29|ENSG00000153165|chr2:106429736-106429736|G/-|frameshift_variant', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 140113 14977 YQNQGIYQV True PC9_epitope_Rep3 1111.52982331647 1111.5287299358602 62.739 2 0.002782664806942008 0.009458527140409054 0.07074440276418183 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 86747 8380 QLLGSAHEV True PC9_epitope_Rep4 952.4977949122001 952.49668993586 39.692 2 0.002769140746727194 0.009458527140409054 0.07076163094916658 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 103289 5609 SPLNTPHTSA True PC9_epitope_Rep1 1023.4985231881901 1023.4974299358599 26.402 2 0.0027541709792888052 0.009458527140409054 0.07078070461958319 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 5711 21362 APALLLIPAA True PC9_epitope_Rep4 948.60080342876 948.59970993586 90.337 2 0.002753400663343018 0.009458527140409054 0.07078168622296788 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 88185 17421 QRVWAEYAL True PC9_epitope_Rep4 1134.5821932425 1134.58108993586 75.003 2 0.0027515185259459475 0.009476353605908261 0.07078408465028213 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF'] 73178 6033 MRVSDRQQL True PC9_epitope_Rep1 1131.5818759726699 1131.5802449037901 28.021 3 0.0027496587524061724 0.009476353605908261 0.07078645464128873 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 108646 7833 SYPRRFSTL True PC9_epitope_Rep6 1125.59309227937 1125.59143490379 39.525 3 0.0027443293618476445 0.009476353605908261 0.07079324645986021 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 46922 11181 ITNIPFDVK True NCI_RA007_Epitope_Rep1 1045.58079626017 1045.5796899358602 47.49 2 0.0027381164736486187 0.009476353605908261 0.07080116485585754 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 48545 18733 KALQFLEEV True PC9_epitope_Rep4 1075.5913609438699 1075.59077496793 80.138 1 0.002737899388630253 0.009476353605908261 0.07080144154563366 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A'] 3862 19716 AGWTCLLPL True PC9_epitope_Rep4 972.5102741721998 972.50916993586 83.962 2 0.002729483649480307 0.009476353605908261 0.07081216863289924 ['UGT1A7|p.G8C|1|0.32|ENSG00000244122|chr2:233681959-233681959|G/T|missense_variant'] 110397 8813 TEVPIATTA True H1975_Epitope_Rep2 901.47566248529 901.47511496793 38.866 1 0.0027265123860396646 0.009476353605908261 0.07081595624400337 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'ENST00000491005.5_1_1:220324595-220324754:-|nuORF'] 9472 7142 AVVIVDDR True PC9_epitope_Rep4 885.4919812557699 885.49088993586 34.748 2 0.0027219777603344113 0.009476353605908261 0.07082173705170018 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 90341 9003 REFESAIVEA True NCI_RA007_Epitope_Rep5 1149.56660274801 1149.56550993586 41.287 2 0.00272195097828524 0.009476353605908261 0.07082177119494316 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 9719 16879 AYGNVFSAF True NCI_RA007_Epitope_Rep5 974.4497820906199 974.44868993586 71.681 2 0.0027174564662484184 0.009476353605908261 0.0708275012300167 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 27513 19622 FMPPGLQEL True PC9_epitope_Rep6 1030.5157534754599 1030.51464993586 88.135 2 0.002700510126327267 0.009476353605908261 0.07084910929747665 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 14126 17533 DSDFFTSYY True H1975_Epitope_Rep1 1143.43967089939 1143.4390749679299 72.939 1 0.0026972470411968773 0.009476353605908261 0.07085327060626655 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant'] 106031 14858 SSYMHFTNV True PC9_epitope_Rep5 1084.46478053176 1084.4636899358602 62.153 2 0.002666829998078543 0.009476353605908261 0.07089206965355674 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 28056 21256 FQSPPIVEL True PC9_epitope_Rep5 1028.5542471591598 1028.5531499358601 86.813 2 0.0026613388652362126 0.009476353605908261 0.07089907573711247 ['nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 1043 8231 AEAEPPSEVV True H1975_Epitope_Rep1 1026.48695544498 1026.48637496793 36.605 1 0.0026602664117585466 0.009476353605908261 0.0709004441331258 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 45885 4414 ISDSEGFK True PC9_epitope_Rep4 881.4130622287299 881.41196993586 23.426 2 0.002658466798098635 0.009476353605908261 0.07090274039471078 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 108001 19053 SWPEGHFATI True PC9_epitope_Rep5 1143.53490869691 1143.53380993586 78.315 2 0.0026543606095203436 0.009476353605908261 0.07090798000448695 ['ENSG00000100591|ENST00000216479|AHSA1'] 28374 10212 FRVPTANVS True PC9_epitope_Rep6 989.5294293936499 989.52832993586 49.926 2 0.0026514060670410227 0.009476353605908261 0.07091175026864731 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 121869 16429 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 68.193 2 0.002633048639360031 0.009476353605908261 0.07093517950986367 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 6405 6727 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 31.286 2 0.002624536743556594 0.009476353605908261 0.07094604512846035 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 48305 20387 IYQTWLKNL True PC9_epitope_Rep1 1177.64954452633 1177.64844993586 83.241 2 0.0026185554563340862 0.009476353605908261 0.07095368114593052 ['ENST00000507606.2_1_7:135347283-135358947:+|nuORF'] 1303 9300 AEDPVSEVP True H1975_Epitope_Rep1 941.43419159613 941.43308993586 40.681 2 0.0025930555099430122 0.009495219034912164 0.07098624286330064 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant'] 57764 15615 LEEPPLVLAA True H1975_Epitope_Rep2 1050.5961119711399 1050.5950099358602 65.219 2 0.0025811531271796337 0.009495219034912164 0.07100144538824534 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9', 'ENST00000464863.1_1_6:32825734-32826344:+|nuORF', 'ENST00000467593.1_1_6:32823908-32826344:+|nuORF'] 65887 8515 LSDPAAGAY True H1975_Epitope_Rep3 863.40249754503 863.40194496793 37.738 1 0.002556593054856559 0.009495219034912164 0.07103282317867791 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF'] 71728 10527 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 45.514 2 0.002542555616640037 0.009495219034912164 0.07105076216732731 ['ENSG00000026025|ENST00000544301|VIM'] 63439 22425 LLVSLLEHL True PC9_epitope_Rep1 1035.63283183303 1035.6317299358602 91.077 2 0.002533473161199 0.009495219034912164 0.07106237086968348 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000461493.1_1_7:6089476-6098783:-|nuORF'] 128543 4204 VPSYPSKSA True PC9_epitope_Rep4 934.47599683846 934.47488993586 22.542 2 0.0025154944378743362 0.009495219034912164 0.07108535465359919 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 117028 8412 TVIAKVNNV True PC9_epitope_Rep3 956.5654805492 956.56438993586 37.322 2 0.002513879492050586 0.009495219034912164 0.07108741946413656 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 103370 2921 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 15.197 2 0.0025113817747769453 0.009495219034912164 0.07109061304583282 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 35055 9117 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 40.006 2 0.002499538804815154 0.009495219034912164 0.07110575698920855 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 71910 16561 MEQISQFLQAA True H1975_Epitope_Rep2 1264.61217304144 1264.61106993586 68.927 2 0.0024994401070967025 0.009495219034912164 0.07110588320734497 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 108483 21733 SYMFVDENTF True PC9_epitope_Rep3 1251.5117902938298 1251.51068993586 88.89 2 0.0024924025685319276 0.009495219034912164 0.07111488351034666 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 136335 11532 WTDGSTLQY True H1975_Epitope_Rep1 1069.47163973401 1069.47107496793 49.341 1 0.002491694508918949 0.009495219034912164 0.07111578909636812 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 115555 9407 TRSPSVCL True PC9_epitope_Rep1 861.4378375079299 861.43674993586 41.042 2 0.0024374889622681916 0.009495219034912164 0.07118514293765638 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 107542 17472 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 72.208 2 0.0024328411468985656 0.009495219034912164 0.07119109208178818 ['ENSG00000073756|ENST00000367468|PTGS2'] 80563 10290 PGPQTVLI True H1975_Epitope_Rep3 823.4803539429099 823.47924993586 44.631 2 0.0024303601166085634 0.009495219034912164 0.07119426792716063 ['ENSG00000027001|ENST00000382172|MIPEP', 'ENST00000382172.3_1_13:24460505-24460568:-|nuORF', 'ENST00000424756.1_1_13:21875607-21878632:+|nuORF'] 73488 23019 MVDGTLLLL True PC9_epitope_Rep2 973.5518046310099 973.55125496793 94.036 1 0.0024110238102206783 0.009495219034912164 0.07121902316402706 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 112795 23983 TLIEDILGV True PC9_epitope_Rep3 971.5539128059899 971.55280993586 97.537 2 0.0023791693326082382 0.009515974831580586 0.0712598193496235 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 71102 14951 LYLKALEGF True NCI_RA007_Epitope_Rep5 1052.5906326678798 1052.5895299358601 64.175 2 0.0023763121956971497 0.009515974831580586 0.07126347938723897 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 46948 19787 ITPENLPQI True PC9_epitope_Rep2 1023.5600608155898 1023.5589699358601 81.499 2 0.0023747114124967727 0.009515974831580586 0.07126553007978868 ['ENSG00000015479|ENST00000394805|MATR3'] 73068 12807 MRDPTFVRL True PC9_epitope_Rep4 1133.60154878809 1133.59990490379 57.122 3 0.002345878536354675 0.009515974831580586 0.07130247446336242 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 107498 2818 SVNGKVLSK True NCI_RA007_Epitope_Rep5 930.5498304850599 930.54872993586 15.699 2 0.0023403810730929044 0.009515974831580586 0.0713095202102058 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 5668 20707 APAELLAALPA True PC9_epitope_Rep4 1035.5964463243097 1035.5953499358602 87.811 2 0.002287306095630511 0.009515974831580586 0.07137757087037754 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 69482 19033 LVAPPLPAA True PC9_epitope_Rep1 847.51673945163 847.51564993586 78.001 2 0.002274684853468838 0.009515974831580586 0.07139376076496093 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 47355 13775 IVGPDGLVY True H1975_Epitope_Rep1 931.50148331031 931.5009349679301 58.128 1 0.0022397621575957075 0.009537360218759032 0.07143857272705613 ['ENSG00000105202|ENST00000221801|FBL'] 76330 19258 NPTLILAA True PC9_epitope_Rep2 811.4803539429099 811.47924993586 79.45 2 0.002230185784698517 0.009537360218759032 0.07145086471871359 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 74934 12629 NHLGGGAVVL True PC9_epitope_Rep1 935.51886470995 935.51776993586 53.447 2 0.002223563733951444 0.009537360218759032 0.07145936557851018 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 102995 16972 SPFGTITSA True PC9_epitope_Rep3 879.43379767331 879.43270993586 70.443 2 0.0022222641231720904 0.009537360218759032 0.07146103400733539 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 104093 21255 SQDYPTLAF True PC9_epitope_Rep1 1040.48147614172 1040.48097496793 86.58 1 0.0021921735072125063 0.009555130883071864 0.07149967254449932 ['ENSG00000134697|ENST00000373062|GNL2'] 93108 6929 RPNPPPVSV True PC9_epitope_Rep6 961.53451477409 961.53340993586 35.59 2 0.0021856955070438332 0.009555130883071864 0.0715079928919422 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 2693 13150 AESVLAVVA True NCI_RA007_Epitope_Rep4 857.4858332461699 857.48528496793 57.68 1 0.00213037052857592 0.009555130883071864 0.07157908300022918 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 2735 8239 AETDVVNSV True H1975_Epitope_Rep3 932.4450906330001 932.44398993586 36.674 2 0.0021239839001546018 0.009555130883071864 0.07158729306637894 ['ENSG00000106524|ENST00000306999|ANKMY2'] 112798 23119 TLIEDILGV True PC9_epitope_Rep4 971.5539128059899 971.5533649679301 97.147 1 0.0021141987302496974 0.009555130883071864 0.07159987340695488 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 9963 12754 AYNPNTQTF True PC9_epitope_Rep1 1054.4719740871801 1054.47086993586 53.932 2 0.002108326321883273 0.009555130883071864 0.0716074241159903 ['ENSG00000174405|ENST00000442234|LIG4'] 5541 17648 AMLAVLHTV True PC9_epitope_Rep2 953.5368232732101 953.53572993586 73.163 2 0.002107572225635958 0.009555130883071864 0.07160839377346676 ['ENSG00000123395|ENST00000336854|ATG101'] 105149 16426 SRFPEALRL True PC9_epitope_Rep3 1087.61382772395 1087.6127299358602 68.319 2 0.0021051307251566623 0.009555130883071864 0.07161153325599262 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 10077 20067 AYTLLGHEF True PC9_epitope_Rep1 1049.51819600361 1049.5170899358602 82.014 2 0.002101788586546966 0.009555130883071864 0.07161583102671502 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 103763 17731 SPVSIM[Oxidation]VV True PC9_epitope_Rep5 846.45209097018 846.45098993586 73.221 2 0.0020994154899874407 0.009555130883071864 0.0716188827947275 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 131579 18986 VTLGPVPEI True PC9_epitope_Rep6 923.53278343859 923.5322349679301 85.673 1 0.0020803434004835284 0.009555130883071864 0.07164341289793236 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 134444 20362 VYPNWAIGL True PC9_epitope_Rep6 1031.5440168286298 1031.54290993586 91.02 2 0.00206599195611022 0.009555130883071864 0.07166187571615504 ['ENSG00000131389|ENST00000622186|SLC6A6'] 1448 6543 AEEGPGVPAA True H1975_Epitope_Rep2 896.4239612655998 896.4234149679301 30.079 1 0.002065123188921388 0.009555130883071864 0.07166299348476485 ['ENSG00000103335|ENST00000301015|PIEZO1'] 110337 5451 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.4390649679301 25.994 1 0.002063577152571065 0.009555130883071864 0.07166498267132514 ['ENSG00000167470|ENST00000682408|MIDN'] 36090 19354 GVAETLVLV True PC9_epitope_Rep6 899.5327834385898 899.53168993586 87.093 2 0.0020503758194866956 0.009555130883071864 0.07168196973389417 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 43084 13008 IEVPTSFSA True H1975_Epitope_Rep3 949.47566248529 949.47511496793 55.27 1 0.002049209123620465 0.009555130883071864 0.0716834711521299 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462'] 65214 9129 LQRQLQAL True NCI_RA007_Epitope_Rep3 968.5767139392398 968.57560993586 42.996 2 0.0020457624996824565 0.009555130883071864 0.07168790674731629 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|92|3|sense', 'HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|40|1|sense'] 93329 8885 RPSSQYIVA True PC9_epitope_Rep5 1019.53999407735 1019.53888993586 39.119 2 0.0020436832090516928 0.009555130883071864 0.07169058277092599 ['SLC7A5|p.F394Sfs*22|1|0.28|ENSG00000103257|chr16:87836607-87836607|A/-|frameshift_variant', 'ENSG00000103257|ENST00000261622|SLC7A5', 'ENST00000437413.2_1_16:21498935-21531497:-|nuORF', 'nc|ENSG00000260727|Q8MH63|SLC7A5P1', 'nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2', 'nc|ENSG00000258186|Q9GIP4|SLC7A5P2', 'ENST00000522841.6_1_16:21495824-21531728:-|nuORF'] 1856 12043 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.48512993586 51.333 2 0.0020204348364771065 0.009555130883071864 0.07172050845088607 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 1307 4796 AEDREQLVA True H1975_Epitope_Rep2 1029.50908787189 1029.50798993586 23.537 2 0.002014504252660969 0.009555130883071864 0.07172814394769929 ['ENSG00000100867|ENST00000250383|DHRS2', 'ENST00000556729.1_1_14:24108037-24109131:+|nuORF', 'ENST00000553896.5_1_14:24099332-24110898:+|nuORF', 'nc|ENSG00000100867|Q13268-2|DHRS2'] 68198 14379 LTDTFTAYY True H1975_Epitope_Rep2 1093.49679185269 1093.49627496793 60.459 1 0.0020129699405042893 0.009555130883071864 0.07173011944384945 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 111166 8686 THGPPVQL True PC9_epitope_Rep2 847.45520182423 847.45410993586 38.775 2 0.0020030375435353843 0.009574160872559256 0.07174290887591564 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 103617 11944 SPTGGFVDA True PC9_epitope_Rep2 849.3868474808899 849.3862949679301 51.266 1 0.001996788297914392 0.009574160872559256 0.07175095661321844 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 104867 16481 SRATSFLL True PC9_epitope_Rep1 893.49706663621 893.49596993586 68.22 2 0.0019907501596715844 0.009574160872559256 0.07175873315410075 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 27952 12257 FQEPNANSV True PC9_epitope_Rep1 1004.4563240230399 1004.45522993586 52.006 2 0.001989356616527123 0.009574160872559256 0.07176052799654667 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122', 'ENST00000480931.1_1_3:128580492-128584319:-|nuORF', 'ENST00000448668.2_1_3:129200375-129202705:+|nuORF'] 76335 19430 NPTLILAA True PC9_epitope_Rep5 811.4803539429099 811.47924993586 79.788 2 0.0019833091955087073 0.009574160872559256 0.07176831730047745 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 68623 21960 LTIDDGIFEV True PC9_epitope_Rep4 1120.56520576568 1120.5641099358602 92.683 2 0.0019745341291985963 0.009574160872559256 0.07177962108147669 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 5562 14075 [Acetylation]-AM[Oxidation]VSEFLK True H1975_Epitope_Rep1 981.4841196907499 981.48357496793 59.306 1 0.0019597366004833554 0.009574160872559256 0.07179868595343733 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 134562 17402 VYSEAARVLQF True PC9_epitope_Rep6 1281.67173652289 1281.67062993586 79.552 2 0.0019578565573916463 0.009574160872559256 0.07180110844904075 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 71251 9276 LYPPRQPTF True NCI_RA007_Epitope_Rep5 1117.59202965021 1117.59092993586 42.326 2 0.0019447888123539916 0.009574160872559256 0.07181794841074496 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 101313 22142 SLINQLALL True PC9_epitope_Rep1 983.6015317047498 983.60042993586 89.983 2 0.001943164901674002 0.009574160872559256 0.07182004130391123 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENST00000469614.1_1_7:4828357-4829561:+|nuORF', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 7080 14609 AQSELETAL True PC9_epitope_Rep4 960.47639076128 960.47528993586 64.123 2 0.0019270448849259968 0.009574160872559256 0.07184081932212748 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 61270 23516 LIPEYLNFI True PC9_epitope_Rep3 1120.61684741572 1120.61574993586 95.735 2 0.0019265875419857133 0.009574160872559256 0.07184140888590157 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 133970 16228 VYINTAQEF True PC9_epitope_Rep6 1083.5236753068698 1083.52256993586 74.784 2 0.0019235708577887117 0.009574160872559256 0.07184529780737685 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 84157 11904 PYGNIQSRL True PC9_epitope_Rep1 1046.55089311422 1046.5497899358602 50.655 2 0.0019228027372760381 0.009574160872559256 0.07184628804664486 ['ENST00000492568.1_1_1:230398346-230398752:+|nuORF', 'ENSG00000143641|ENST00000366672|GALNT2'] 35458 6861 GSHSMRYFY True NCI_RA007_Epitope_Rep3 1146.4916639859398 1146.49056993586 34.097 2 0.0019202965199067816 0.009574160872559256 0.0718495190650136 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 6968 22614 AQLDPSLVAFL True PC9_epitope_Rep4 1172.6441247927198 1172.64302993586 95.215 2 0.0018703973162940374 0.009594243453927643 0.07191387267385287 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 45680 17496 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6744449037901 72.474 3 0.0018571310911987518 0.009594243453927643 0.07193098928436888 ['ENSG00000136628|ENST00000366923|EPRS1'] 43215 18763 IFIRNPRTLF True PC9_epitope_Rep5 1275.74517624667 1275.74353490379 77.182 3 0.0017623797193098971 0.009594243453927643 0.07205333327675165 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 60849 15355 LHVPGPMAV True PC9_epitope_Rep2 919.49495846123 919.49386993586 64.345 2 0.0017506890948661823 0.009594243453927643 0.07206843952654053 ['ENSG00000102243|ENST00000370634|VGLL1'] 45510 18123 IQNLVSASL True PC9_epitope_Rep5 943.53384606775 943.53274993586 74.72 2 0.0016972704336474821 0.009594243453927643 0.07213749669212517 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 105573 5661 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.53735490379 26.773 3 0.0016904654240095117 0.009594243453927643 0.07214629757968347 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 134075 10006 VYKPAQNSW True PC9_epitope_Rep3 1091.5399940773498 1091.5388899358602 43.442 2 0.0016818332287781173 0.009594243453927643 0.07215746275696139 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 108283 7285 SYIGGHEGL True NCI_RA007_Epitope_Rep5 931.43994568291 931.43884993586 34.698 2 0.0016764737818842877 0.009594243453927643 0.0721643955240839 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 44366 10539 ILELAQGG True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 45.492 1 0.0016764488612284276 0.009594243453927643 0.07216442776165954 ['nc|ENSG00000139908|Q6SA08-3|TSSK4', 'nc|ENSG00000139908|Q6SA08|TSSK4', 'ENSG00000139908|ENST00000339917|TSSK4'] 42828 15771 IEQEGYWLP True H1975_Epitope_Rep3 1133.53932537101 1133.53822993586 66.111 2 0.0016599914562772295 0.009594243453927643 0.07218571964386862 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 5660 6512 APAEEPAAAAA True PC9_epitope_Rep3 967.4610750503098 967.45996993586 30.076 2 0.0016413559071666469 0.009616238784756152 0.07220983540076137 ['ENSG00000277443|ENST00000612661|MARCKS'] 121186 8071 VESGVPQPP True H1975_Epitope_Rep3 908.4603467743198 908.45924993586 36.02 2 0.0016213031214646172 0.009632884982465485 0.07223579214772498 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 21552 10317 ERNNTRLLL True PC9_epitope_Rep1 1127.64110510095 1127.63944490379 44.568 3 0.0015779979826893705 0.009632884982465485 0.07229187192838374 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA2|p.Q162Sfs*16|1|0.19|ENSG00000139220|chr12:81445642-81445642|G/-|frameshift_variant', 'ENST00000602716.5_1_19:49631560-49640169:+|nuORF', 'ENST00000421230.6_1_19:49631605-49643027:+|nuORF', 'nc|ENSG00000143847|O75335|PPFIA4', 'PPFIA3|p.Q899Hfs*20|1|0.28|ENSG00000177380|chr19:49142956-49142968|GGAGATGGTCTCG/-|frameshift_variant', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'ENSG00000143847|ENST00000295706|PPFIA4'] 6293 6203 APRGTGIVSA True PC9_epitope_Rep3 927.5137793295098 927.51268993586 28.9 2 0.0015201590827911724 0.009632884982465485 0.07236682548099199 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 127990 8400 VPHQPFSQA True PC9_epitope_Rep1 1009.4981292653698 1009.49702993586 37.148 2 0.0015061113419164672 0.009632884982465485 0.07238503907342898 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 49280 8253 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5905899358602 36.73 2 0.0014951790397282289 0.009632884982465485 0.07239921580522415 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 1241 6743 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 30.851 1 0.0014752709186635537 0.009632884982465485 0.07242503768231302 ['ENSG00000162783|ENST00000367577|IER5'] 6869 18595 AQIDGTLSTI True PC9_epitope_Rep1 1017.5342399905701 1017.5336749679301 76.313 1 0.0014327342810984524 0.009632884982465485 0.07248023386561796 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 14081 4564 DRSKSYEL True PC9_epitope_Rep4 996.4876241513199 996.48652993586 24.053 2 0.0014253184693739085 0.009632884982465485 0.07248986007322533 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1'] 24244 18220 EYSKYLQQAF True PC9_epitope_Rep1 1275.6135529404298 1275.61244993586 74.875 2 0.0014249854871768888 0.009632884982465485 0.0724902923291038 ['nc|ENSG00000162702|Q9Y2X9-2|ZNF281', 'ENSG00000162702|ENST00000367353|ZNF281'] 59083 16275 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46908993586 67.815 2 0.0014049378089183275 0.009632884982465485 0.07251632060666988 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 93642 4700 RQREQEIAL True NCI_RA007_Epitope_Rep3 1141.6203696563698 1141.61872490379 25.431 3 0.0014042575780180565 0.009632884982465485 0.07251720389032647 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'GIGYF2|p.R806P|1|0.11|ENSG00000204120|chr2:232819873-232819873|G/C|missense_variant'] 24687 21496 FALPYVIVL True H1975_Epitope_Rep3 1033.6212045201698 1033.62010993586 89.834 2 0.0013844335553993639 0.009632884982465485 0.07254294915955735 ['nc|ENSG00000163607|Q8N3Z3-2|GTPBP8', 'ENSG00000163607|ENST00000383678|GTPBP8'] 134298 22919 VYNPVIYVF True PC9_epitope_Rep5 1112.5906326678798 1112.5895299358601 93.149 2 0.0013782584037124739 0.009632884982465485 0.0725509702175387 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 128494 16606 VPSPGLPVSA True PC9_epitope_Rep3 922.5123823471799 922.51128993586 69.012 2 0.0013710076377930753 0.009632884982465485 0.07256038929522726 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 40479 8581 HRDGLRLSI True PC9_epitope_Rep5 1065.60432566941 1065.60322993586 37.948 2 0.001367766265268725 0.009632884982465485 0.07256460029351382 ['ENSG00000115687|ENST00000234040|PASK', 'nc|ENSG00000115687|Q96RG2-2|PASK', 'ENST00000493544.1_1_2:242054361-242072488:-|nuORF', 'nc|ENSG00000115687|Q96RG2-4|PASK'] 89819 10268 RALTVPEL True NCI_RA007_Epitope_Rep3 897.5283667644899 897.52726993586 47.464 2 0.00136468947080232 0.009632884982465485 0.0725685976570531 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 90185 3218 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 16.941 2 0.0013588321589108065 0.009632884982465485 0.07257620793358002 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 1246 6693 AEDFKQQVP True H1975_Epitope_Rep2 1060.5189242796 1060.5178299358602 30.654 2 0.0013510459009988586 0.009632884982465485 0.07258632540511566 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 2789 6285 AEVAAAVSA True H1975_Epitope_Rep2 787.4075829254699 787.40703496793 29.118 1 0.0013369893224599472 0.009632884982465485 0.07260459330632957 ['ENSG00000170684|ENST00000303809|ZNF296'] 89401 21231 QYAPLLAVF True PC9_epitope_Rep6 1020.5644179200399 1020.56332993586 94.514 2 0.001320372811240226 0.009632884982465485 0.07262619268717757 ['ENSG00000136261|ENST00000258761|BZW2'] 3934 15416 AHDDSVMYL True PC9_epitope_Rep3 1049.44879611445 1049.4476899358601 64.452 2 0.0012998851620613834 0.009632884982465485 0.07265283091789937 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 140944 20082 YSETLLSYFY True H1975_Epitope_Rep2 1284.59142051352 1284.5903299358602 83.229 2 0.0012943916149744726 0.009632884982465485 0.07265997496594476 ['ENSG00000062582|ENST00000317534|MRPS24'] 107180 9970 SVILPILKK True NCI_RA007_Epitope_Rep4 1009.68995278633 1009.68884993586 45.194 2 0.0012929293014655335 0.009632884982465485 0.07266187671391135 ['ENSG00000187231|ENST00000428443|SESTD1', 'ENST00000486468.1_1_2:180027226-180056568:-|nuORF'] 111273 18924 THLLGVAL True PC9_epitope_Rep3 822.49633836022 822.49524993586 78.012 2 0.001292763001296699 0.009632884982465485 0.07266209299077579 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 111374 13078 THSDAFRVSL True PC9_epitope_Rep1 1131.56727145435 1131.56563490379 55.172 3 0.0012845326953674066 0.009632884982465485 0.07267279729997789 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1', 'ALPK1|p.D797Gfs*8|1|0.09|ENSG00000073331|chr4:112431936-112431937|-/GATGTGTGCCT|frameshift_variant'] 88999 20035 QVIQSLIAL True PC9_epitope_Rep6 983.6015317047498 983.60042993586 89.732 2 0.0012776705301241417 0.009632884982465485 0.07268172314410261 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 32118 13160 GETIFVTAP True NCI_RA007_Epitope_Rep4 933.48074786573 933.47964993586 57.719 2 0.0012658916808596502 0.009654651988636364 0.07269704626172786 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 103850 8297 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 36.887 2 0.0012648232890170195 0.009654651988636364 0.0726984362576516 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 34912 15386 GQMIFAQAL True NCI_RA007_Epitope_Rep4 977.5004377644899 977.49934993586 66.856 2 0.001249113870813538 0.009675343408117524 0.07271887685540217 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 111491 16875 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62789490379 70.157 3 0.0012180450534803261 0.009675343408117524 0.07275931573092438 ['ENSG00000076003|ENST00000264156|MCM6'] 102086 14635 SLRGLQEQL True PC9_epitope_Rep3 1042.5771078620598 1042.5760099358602 61.425 2 0.0012166502110133464 0.009675343408117524 0.07276113165316521 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-4|MTCL2'] 40401 7628 HQVPAVSSV True PC9_epitope_Rep1 922.4872302285 922.48612993586 34.162 2 0.0012157527616204625 0.009675343408117524 0.07276230004618978 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 40067 7672 HPTWALKEA True PC9_epitope_Rep4 1051.5450794577898 1051.54398993586 36.891 2 0.0012128478629441035 0.009675343408117524 0.07276608204530628 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 12028 16098 DHSIIETL True PC9_epitope_Rep4 926.47091145802 926.46980993586 69.857 2 0.0012082380538586328 0.009675343408117524 0.07277208404537873 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 107031 4279 SVFQQGMKNK True NCI_RA007_Epitope_Rep4 1165.5913780272097 1165.59028993586 22.793 2 0.001192033364319663 0.009675343408117524 0.07279318569604529 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000479960.1_1_1:116943772-116944278:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3'] 134752 13588 VYTSVVEEL True NCI_RA007_Epitope_Rep4 1037.5280919809697 1037.52698993586 59.472 2 0.0011549049922923824 0.00971864737729653 0.07284155191600003 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 78856 19477 PAEPAFLA True PC9_epitope_Rep5 814.4225047136199 814.42140993586 79.971 2 0.0011516233004050928 0.00971864737729653 0.0728458280927374 ['ENSG00000163807|ENST00000296121|KIAA1143'] 133806 11742 VYFSKSEQL True PC9_epitope_Rep2 1099.5549754351498 1099.5538699358601 50.499 2 0.001136957993295757 0.00971864737729653 0.07286493995502363 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant'] 47531 17543 IVSNPVDILTY True NCI_RA007_Epitope_Rep2 1232.66525416012 1232.66414993586 72.976 2 0.0011351810226795796 0.00971864737729653 0.07286725597106068 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 27317 9744 FLRTKELDL True NCI_RA007_Epitope_Rep3 1133.6444591458899 1133.64280490379 45.395 3 0.0011329062338428343 0.00971864737729653 0.07287022090208563 ['nc|ENSG00000136636|Q9Y597-2|KCTD3', 'ENSG00000136636|ENST00000259154|KCTD3'] 134333 21969 VYPASKMFPFI True PC9_epitope_Rep1 1298.67331674602 1298.67220993586 89.323 2 0.0011072079002817585 0.009740403816285778 0.07290372227654851 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 17751 7243 EHSGHTIVSL True PC9_epitope_Rep4 1078.54072235334 1078.5396299358601 35.166 2 0.001094973592678143 0.009740403816285778 0.0729196755997139 ['ENSG00000221926|ENST00000649191|TRIM16'] 20840 19541 EQISQFLQA True PC9_epitope_Rep4 1062.53457434374 1062.53346993586 83.287 2 0.0010913958156619883 0.009781740750598882 0.07292434146930102 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.Q89H|1|0.32|ENSG00000158710|chr1:159919749-159919749|C/G|missense_variant'] 6009 8795 APITGQVSA True PC9_epitope_Rep2 842.4497820906199 842.44868993586 39.184 2 0.0010847069184468014 0.009781740750598882 0.07293306524974508 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 39951 10006 HPKYSDMIVA True PC9_epitope_Rep2 1159.56957995347 1159.56848993586 43.816 2 0.001053237467570463 0.009781740750598882 0.07297411912196528 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 138322 12419 YHDISTEL True PC9_epitope_Rep1 976.45017601344 976.44906993586 52.632 2 0.0010315543838330598 0.009781740750598882 0.0730024164759773 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 103036 10832 SPFSGLQKA True PC9_epitope_Rep1 933.49198125577 933.49088993586 46.551 2 0.0010305724305713952 0.009781740750598882 0.07300369816816538 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'nc|ENSG00000137802|O60336-3|MAPKBP1', 'ENST00000505061.5_1_15:42111671-42117631:+|nuORF', 'nc|ENSG00000137802|O60336-4|MAPKBP1'] 15130 6206 EAAAAVVAA True H1975_Epitope_Rep2 771.41266830591 771.41211496793 28.843 1 0.0010281004819029374 0.009781740750598882 0.07300692475049943 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000398654.7_1_18:44497289-44497409:-|nuORF', 'LRRCC1|p.C52Lfs*3|1|0.35|ENSG00000133739|chr8:85109642-85109643|-/T|frameshift_variant', 'ENSG00000133739|ENST00000360375|LRRCC1'] 33436 20446 GLAISQLVDV True PC9_epitope_Rep3 1013.57571087973 1013.57517496793 83.901 1 0.0010201701982967158 0.009781740750598882 0.07301727672738077 ['ENSG00000169684|ENST00000299565|CHRNA5'] 118924 13680 VADPVEAVL True NCI_RA007_Epitope_Rep3 911.4963979298699 911.49530993586 61.122 2 0.0010164916031818027 0.009781740750598882 0.07302207905141858 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 54505 21792 KYIDYLMTW True PC9_epitope_Rep5 1231.5947320721498 1231.59362993586 88.855 2 0.0009899960524340043 0.009781740750598882 0.07305667562755432 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'nc|ENSG00000114978|Q9H8S9-2|MOB1A', 'ENST00000463975.1_1_2:74392309-74405801:-|nuORF', 'ENST00000509041.5_1_4:71768157-71841035:+|nuORF', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 10817 4302 CSQNQYHQYLK True NCI_RA007_Epitope_Rep1 1410.6350337443403 1410.6333749037901 20.845 3 0.0009880567487210298 0.009781740750598882 0.07305920837249844 ['ADAM7|p.P470Rfs*12|1|0.18|ENSG00000069206|chr8:24491955-24491956|CT/-|frameshift_variant', 'ENSG00000069206|ENST00000175238|ADAM7'] 99746 20353 SIIGRLLEV True PC9_epitope_Rep4 998.6124307416198 998.6118849679301 86.43 1 0.000978780994387189 0.009781740750598882 0.07307132351620621 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 130806 9431 VTANTMENV True PC9_epitope_Rep4 977.44879611445 977.44768993586 43.886 2 0.0009535083173710459 0.009781740750598882 0.07310434027196573 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant'] 64676 21430 LPVLIPVAS True PC9_epitope_Rep5 907.5742543277499 907.57314993586 87.493 2 0.0009265542092028196 0.009781740750598882 0.07313956640985882 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 119356 9245 VAPEEHPVLL True NCI_RA007_Epitope_Rep3 1102.60225998074 1102.60116993586 43.466 2 0.0009228016143996022 0.009781740750598882 0.07314447169184532 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 57774 11179 LEEQNELLSA True H1975_Epitope_Rep2 1144.5611830143998 1144.56008993586 48.038 2 0.0009040179975426761 0.009801095416546555 0.07316902891286407 ['ENSG00000132688|ENST00000368223|NES'] 93049 14092 RPNATLILA True PC9_epitope_Rep1 967.5814649665099 967.58036993586 59.034 2 0.0009019673490735485 0.009801095416546555 0.0731717102646133 ['ENSG00000179913|ENST00000318683|B3GNT3'] 115305 10780 TRHPENWTL True PC9_epitope_Rep3 1152.56760580752 1152.56596490379 46.423 3 0.0008968029383821899 0.009801095416546555 0.07317846339309182 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 89069 13879 QVMQGMGVSA True PC9_epitope_Rep3 1006.4575869763398 1006.45648993586 58.466 2 0.000896267559900421 0.009801095416546555 0.07317916349662622 ['ENSG00000169813|ENST00000682386|HNRNPF'] 118349 16424 TYNEPGSQVF True PC9_epitope_Rep1 1140.50875351872 1140.5076499358602 67.998 2 0.0008869077903795299 0.009801095416546555 0.07319140391407668 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 142651 18054 YYPAQGVQQF True PC9_epitope_Rep5 1199.56112344475 1199.56002993586 74.459 2 0.0008835282972665443 0.009801095416546555 0.07319582390010153 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 81785 18501 PLPPLPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 76.5 2 0.0008628606253756516 0.009801095416546555 0.07322285931865806 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 9019 15830 AVGVLTQTV True PC9_epitope_Rep4 886.5123823471799 886.51128993586 68.813 2 0.0008563341409377826 0.009801095416546555 0.07323139822982443 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|36|1|sense'] 8536 3966 ATTLKNRPL True NCI_RA007_Epitope_Rep4 1012.60292868708 1012.60182993586 21.494 2 0.0008519727263283215 0.009801095416546555 0.07323710490628466 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2', 'AFAP1L2|p.V797A|1|0.14|ENSG00000169129|chr10:114297018-114297018|A/G|missense_variant', 'nc|ENSG00000169129|Q8N4X5-3|AFAP1L2', 'ENST00000491814.1_1_10:116056685-116061337:-|nuORF'] 117885 10466 TWFNQPARKI True PC9_epitope_Rep6 1259.6774906096698 1259.67583490379 51.013 3 0.0008377720629192718 0.009801095416546555 0.07325568809494618 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 130076 11845 VSDGIIAPGY True H1975_Epitope_Rep3 990.5022115862998 990.5016649679301 50.71 1 0.000810990521468159 0.009801095416546555 0.07329074472707392 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000446622.5_1_2:216199652-216212358:+|nuORF'] 21300 12519 EREKWIHAL True PC9_epitope_Rep1 1180.63529144452 1180.6336349037902 53.025 3 0.0008071792570761888 0.009801095416546555 0.07329573466929734 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 103521 8091 SPRNLAMEA True PC9_epitope_Rep5 987.4807649490699 987.47966993586 36.06 2 0.000805096825856365 0.009801095416546555 0.07329846122763059 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 31979 5089 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep3 977.4124109861698 977.41130993586 24.69 2 0.0007422237495729995 0.009819568204991799 0.07338081884186488 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 119525 9430 VASGSAVVL True H1975_Epitope_Rep2 801.45961849833 801.4590749679301 41.24 1 0.0007381712256607827 0.009819568204991799 0.0733861297085728 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 105486 8113 SRYEGKMETL True PC9_epitope_Rep3 1212.5808729131597 1212.57922490379 36.182 3 0.0007357557200972345 0.009819568204991799 0.07338929539036812 ['ENSG00000110395|ENST00000264033|CBL'] 62501 21583 LLIPGLATA True PC9_epitope_Rep2 867.54295419947 867.54184993586 88.491 2 0.0007233642153470029 0.009819568204991799 0.0734055369479819 ['ENSG00000125356|ENST00000371437|NDUFA1'] 47357 13748 IVGPDGLVY True H1975_Epitope_Rep3 931.50148331031 931.5009349679301 58.179 1 0.0007233070822123881 0.009819568204991799 0.07340561183887645 ['ENSG00000105202|ENST00000221801|FBL'] 1824 10037 AEIASSLPAA True H1975_Epitope_Rep3 928.48656152216 928.48546993586 43.643 2 0.0007196656079908755 0.009819568204991799 0.07341038525503063 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L'] 106678 16189 STTNGGILTV True PC9_epitope_Rep2 961.50802524273 961.50692993586 67.522 2 0.0007148034665045987 0.009819568204991799 0.07341675915369203 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 26857 14711 FLDDSTALY True H1975_Epitope_Rep1 1043.48114178855 1043.48004993586 61.804 2 0.0007094684981380706 0.009819568204991799 0.07342375338501153 ['ENSG00000100558|ENST00000216446|PLEK2'] 71727 10432 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 45.142 2 0.0006867804334424091 0.009819568204991799 0.07345350356724809 ['ENSG00000026025|ENST00000544301|VIM'] 47586 10482 IVVNLTGR True PC9_epitope_Rep4 870.5287011176599 870.52760993586 48.035 2 0.0006845302587845669 0.009819568204991799 0.07345645466220177 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 39539 9491 HLGALLAR True PC9_epitope_Rep3 849.51847078713 849.51736993586 41.457 2 0.0006766752253443606 0.009819568204991799 0.0734667572254819 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 30700 10129 GALETIWR True H1975_Epitope_Rep1 944.5079656730799 944.50686993586 43.897 2 0.0006703312863834524 0.009819568204991799 0.07347507867185017 ['ENSG00000162461|ENST00000294454|SLC25A34'] 11915 10781 DHLPNAAL True PC9_epitope_Rep2 849.43446637965 849.43336993586 46.787 2 0.0006397287887993394 0.009819568204991799 0.07351523069710307 ['ENSG00000101577|ENST00000677752|LPIN2'] 134028 7986 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 40.181 3 0.0006343323664442528 0.009819568204991799 0.07352231283565007 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 118418 13751 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47054993586 60.789 2 0.0006179525629031955 0.009819568204991799 0.07354381253762818 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 584 11251 AARLPLDAA True PC9_epitope_Rep1 896.5079656730799 896.50686993586 48.156 2 0.0005948054461727242 0.009819568204991799 0.07357420312578111 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 120190 9296 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48472993586 40.715 2 0.0005938047483175864 0.009819568204991799 0.07357551719283581 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 3403 18229 AGIKEYFNV True PC9_epitope_Rep1 1039.53384606775 1039.53274993586 74.908 2 0.000568620352196886 0.00984107985903318 0.07360859407402756 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF'] 73025 15397 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 64.232 2 0.00056806995852732 0.00984107985903318 0.07360931708274972 ['PODXL|p.G363Efs*14|1|0.12|ENSG00000128567|chr7:131508964-131508964|C/-|frameshift_variant', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENSG00000128567|ENST00000378555|PODXL'] 109088 17603 TALLKIEGV True PC9_epitope_Rep1 942.57498260374 942.57388993586 72.503 2 0.0005660002815208502 0.00984107985903318 0.07361203590321246 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 333 10561 AAIENLNEA True PC9_epitope_Rep4 943.46107505031 943.45996993586 48.354 2 0.0005515008948413381 0.00988059106316046 0.07363108512420637 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 120151 13568 VEALTTLEVA True H1975_Epitope_Rep1 1044.5702911461199 1044.56977496793 57.315 1 0.0005374800505737441 0.00988059106316046 0.07364950926223819 ['ENSG00000149806|ENST00000529639|FAU'] 108636 11066 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 47.565 3 0.0005372331920683416 0.00988059106316046 0.07364983367941438 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 132176 11053 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 50.578 2 0.0005099683963371447 0.00988059106316046 0.07368567140046267 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 89095 12904 QVPEKLDVV True PC9_epitope_Rep5 1025.5757108797297 1025.57460993586 54.647 2 0.0004898319389083861 0.00988059106316046 0.07371214805683662 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000490291.1_1_2:85578731-85581633:-|nuORF'] 62124 6542 LLEGEEERLR True NCI_RA007_Epitope_Rep5 1242.6568147347398 1242.65515490379 31.827 3 0.00048066309091516536 0.00988059106316046 0.07372420625952522 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 135416 13429 WHHTFYNEL True PC9_epitope_Rep4 1245.55670677065 1245.55560993586 59.554 2 0.0004341494721653654 0.00988059106316046 0.07378540107345492 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 2545 12788 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.4960299358602 54.252 2 0.00038057748377735704 0.00988059106316046 0.07385593072901425 ['ENSG00000123607|ENST00000243344|TTC21B'] 107222 18968 SVISQSTLV True PC9_epitope_Rep2 932.51786165044 932.51676993586 78.324 2 0.00036975437933967233 0.00988059106316046 0.07387018609866011 ['ENST00000540013.5_1_11:94212913-94219150:-|nuORF'] 15005 15412 DYKESFNTI True PC9_epitope_Rep5 1115.5135045459901 1115.51297496793 64.291 1 0.00035215319472403953 0.00988059106316046 0.07389337357853398 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 102867 12409 SPAAPVITA True PC9_epitope_Rep5 825.45961849833 825.45852993586 52.73 2 0.0003177840731857195 0.00988059106316046 0.0739386670392643 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 52488 9111 KKVYASFAL True NCI_RA007_Epitope_Rep2 1025.5909670210497 1025.5898699358602 40.045 2 0.0003166141074413875 0.00988059106316046 0.07394020925979787 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 39979 9143 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.4488349679301 45.277 1 0.0002988338687873043 0.00988059106316046 0.0739636497979225 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 92758 10572 RPAAPLIGA True PC9_epitope_Rep1 864.51813643396 864.51702993586 45.556 2 0.0002527377805619719 0.00988059106316046 0.07402444719824283 ['ENSG00000111276|ENST00000228872|CDKN1B'] 110989 4536 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 24.698 2 0.00024707777608336305 0.00988059106316046 0.07403191499322959 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 72516 22877 MLFPGSIAL True PC9_epitope_Rep5 947.51502519947 947.51392993586 92.994 2 0.00023443698332140128 0.00988059106316046 0.0740485953221303 ['ENSG00000101367|ENST00000375571|MAPRE1'] 26635 19821 FIPPDGNFRL True PC9_epitope_Rep1 1174.61349337078 1174.6123899358602 81.056 2 0.00023386421189758912 0.00988059106316046 0.07404935119911646 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 136426 17833 WVDETLSSV True PC9_epitope_Rep6 1034.49204082542 1034.49094993586 81.225 2 0.0002164589730530087 0.00988059106316046 0.07407232344643767 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 115354 6828 TRISGQVV True PC9_epitope_Rep5 858.4923156089399 858.49120993586 31.236 2 0.00021558617582406227 0.00988059106316046 0.07407347554984771 ['ENSG00000076003|ENST00000264156|MCM6', 'MCM6|p.R143W|1|0.21|ENSG00000076003|chr2:135868799-135868799|G/A|missense_variant'] 118614 14604 TYSHGNYLF True PC9_epitope_Rep2 1100.49270953176 1100.4916099358602 61.443 2 0.0002139189872232856 0.00988059106316046 0.07407567629839437 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 26931 15414 FLDPNNIPKA True PC9_epitope_Rep5 1127.5975089534702 1127.59640993586 64.299 2 0.00020983748692159594 0.00988059106316046 0.0740810642377447 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENST00000532552.2_1_11:77817934-77820625:-|nuORF'] 133853 13783 VYGPLPQSF True NCI_RA007_Epitope_Rep3 1006.5123823471798 1006.51187496793 61.546 1 0.00019672537263382557 0.00988059106316046 0.0740983754289989 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 107444 11466 SVLSPLLNK True NCI_RA007_Epitope_Rep2 969.5858816406101 969.58478993586 49.193 2 0.00013866413840776999 0.009900990099009901 0.07417506796131867 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 126714 15092 VLPGHFNTF True PC9_epitope_Rep4 1030.5236157372199 1030.5225099358602 65.984 2 0.00012483629743210482 0.009900990099009901 0.07419334205494743 ['ENSG00000176055|ENST00000316610|MBLAC2'] 98965 6051 SHAQTVVL True PC9_epitope_Rep6 853.46576650793 853.46466993586 31.641 2 0.00011417614445016704 0.009900990099009901 0.07420743228271742 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 58054 7367 LEIKPPPSA True H1975_Epitope_Rep1 950.54368247546 950.54258993586 33.345 2 9.409516472089822e-05 0.009900990099009901 0.07423398024794844 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P1059Rfs*35|1|0.35|ENSG00000080603|chr16:30720897-30720897|C/-|frameshift_variant', 'SRCAP|p.Q1189Sfs*2|1|0.18|ENSG00000080603|chr16:30722142-30722142|G/-|frameshift_variant', 'SRCAP|p.A1596Sfs*250|1|0.25|ENSG00000080603|chr16:30724210-30724214|GCAAT/-|frameshift_variant'] 27650 20358 FPFAPPAAA True PC9_epitope_Rep3 887.4541391950698 887.45304993586 83.556 2 8.875469432883661e-05 0.009900990099009901 0.07424104182546949 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 78247 18521 NYGRVFSEW True PC9_epitope_Rep2 1156.53015766964 1156.5290699358602 76.585 2 8.776883526336042e-05 0.009900990099009901 0.07424234546023972 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'SNX4|p.Y310Lfs*13|1|0.24|ENSG00000114520|chr3:125460786-125460787|-/A|frameshift_variant', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 47875 13697 IYIAGHPAF True PC9_epitope_Rep6 987.51780208079 987.51670993586 64.472 2 6.645714497983909e-05 0.009900990099009901 0.0742705309472545 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 55015 16737 KYQKGFSLW True PC9_epitope_Rep1 1155.6076797143498 1155.60658993586 69.206 2 4.707681351607587e-05 0.009900990099009901 0.07429616930928275 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 98181 6730 SETALPGA True NCI_RA007_Epitope_Rep3 744.3653837603199 744.36483496793 33.562 1 0.0 0.00992248062015504 0.07435847596035647 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 110367 7936 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 35.474 1 0.0 0.00992248062015504 0.07435847596035647 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 121846 16500 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 68.291 2 0.0 0.00992248062015504 0.07435847596035647 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 89388 19203 QYAGKYVLF True PC9_epitope_Rep3 1087.57023157647 1087.56912993586 79.083 2 -2.2483456043555676e-05 0.009964570416297608 0.07438824726674205 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 32114 13579 GETIFVTAP True NCI_RA007_Epitope_Rep1 933.48074786573 933.47964993586 56.829 2 -6.643509108051548e-05 0.009964570416297608 0.07444647206096987 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 134054 9379 VYKDHQTITI True PC9_epitope_Rep1 1216.6451874218799 1216.6440899358602 40.934 2 -6.818754939989043e-05 0.009964570416297608 0.07444879435323769 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 37046 17936 GVPEWFHGA True PC9_epitope_Rep5 998.4610154806597 998.45990993586 74.009 2 -7.542364782057813e-05 0.009964570416297608 0.07445838395204965 ['ENSG00000196684|ENST00000613986|HSH2D'] 89093 16220 QVPEEQVLNAA True PC9_epitope_Rep5 1196.60371653272 1196.60260993586 67.382 2 -7.689530845026071e-05 0.009964570416297608 0.07446033437860482 ['ENSG00000160813|ENST00000292330|PPP1R35'] 6416 7732 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 34.682 2 -0.00013760327429377495 0.009964570416297608 0.07454082641991817 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 118379 11356 TYNSSGAYRF True PC9_epitope_Rep1 1164.5199869087598 1164.5188899358602 48.56 2 -0.00013986453516073679 0.009964570416297608 0.07454382589707108 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 140843 14301 YSDPSVLYM True H1975_Epitope_Rep3 1073.47394823313 1073.4733749679299 60.353 1 -0.00014760308095663175 0.009964570416297608 0.07455409149008353 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Nfs*41|1|0.31|ENSG00000068024|chr2:239053574-239053593|GTGCGCTGCAGGCAGCGCCA/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 131754 21071 VTPPGFQLV True PC9_epitope_Rep1 956.53311779176 956.53202993586 85.882 2 -0.00016197699070206827 0.009964570416297608 0.07457316213931951 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 41833 20665 IAVNAVLTV True PC9_epitope_Rep5 898.5487678559 898.5482149679301 84.542 1 -0.00016826881668481852 0.009964570416297608 0.07458151103109516 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 118514 16504 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 68.619 2 -0.00019574170271345043 0.009985608325030444 0.07461797441686817 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 24593 19891 FAIDPHLLL True PC9_epitope_Rep6 1037.59096702105 1037.5898699358602 89.165 2 -0.0002047425110996468 0.009985608325030444 0.07462992372765428 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 77880 10430 NVHAVFQEA True PC9_epitope_Rep3 1013.4930438849299 1013.49194993586 45.057 2 -0.00022564958515735434 0.009985608325030444 0.07465768527485446 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 34631 6848 GPYGGAQPSA True PC9_epitope_Rep3 903.40864555463 903.40754993586 31.355 2 -0.00024171512366068503 0.009985608325030444 0.07467902337702181 ['ENSG00000239306|ENST00000310137|RBM14'] 70964 20299 LYGQVQVF True PC9_epitope_Rep5 952.5018176634799 952.50072993586 83.131 2 -0.0002589975687911862 0.009985608325030444 0.07470198301197795 ['ENSG00000162408|ENST00000377705|NOL9'] 29567 15505 FVIETARQL True PC9_epitope_Rep2 1075.6025943339098 1075.6014899358602 64.914 2 -0.00028460882461529385 0.010005755523088503 0.07473601743246117 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BP2|p.L310Pfs*23|1|0.15|ENSG00000168264|chr1:234608566-234608567|-/GGGTGTTTGTTGTTTCTGG|frameshift_variant', 'IRF2BP2|p.A444Efs*22|1|0.06|ENSG00000168264|chr1:234607570-234607571|-/CT|frameshift_variant', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2'] 134863 15881 VYVLTVTEL True NCI_RA007_Epitope_Rep3 1035.5852129342697 1035.5841099358602 70.123 2 -0.00029027711070136867 0.010005755523088503 0.07474355154932993 ['ENSG00000196368|ENST00000375992|NUDT11', 'ENSG00000122824|ENST00000356450|NUDT10'] 12305 13055 DINTDGAVNF True NCI_RA007_Epitope_Rep5 1064.47745339044 1064.47634993586 56.893 2 -0.0003331872216159966 0.010005755523088503 0.07480060538002076 ['ENSG00000143546|ENST00000368733|S100A8'] 31830 9394 GEIRTITVV True NCI_RA007_Epitope_Rep4 986.5760452328999 986.57494993586 42.988 2 -0.0003569663702235343 0.010005755523088503 0.0748322368889611 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 17265 14555 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 61.257 2 -0.00037944204920766286 0.010005755523088503 0.07486214397066118 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 80785 13530 PHLENVVL True PC9_epitope_Rep4 919.51271670035 919.51160993586 59.938 2 -0.0004132176357691367 0.010005755523088503 0.07490710450199184 ['ENST00000485726.1_1_7:103828364-103848439:-|nuORF', 'nc|ENSG00000164815|O43913-2|ORC5', 'ENSG00000164815|ENST00000297431|ORC5'] 6947 14097 AQIKPFYTV True PC9_epitope_Rep6 1065.5858816406098 1065.58478993586 66.096 2 -0.0004178007132187959 0.010005755523088503 0.07491320688985166 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 7832 9188 ASVPKVETV True PC9_epitope_Rep3 928.52294703088 928.52184993586 40.28 2 -0.00042009846112250123 0.010005755523088503 0.07491626649548046 ['ENSG00000100664|ENST00000216554|EIF5'] 75156 6397 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59746993586 31.697 2 -0.00044131298713642454 0.010005755523088503 0.07494451960949876 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 28058 21188 FQSPPTPFL True PC9_epitope_Rep2 1032.5280324113198 1032.5269299358602 86.955 2 -0.00045016382317117365 0.01002700429412546 0.07495630941600213 ['nc|ENSG00000175550|Q14919-2|DRAP1', 'ENSG00000175550|ENST00000312515|DRAP1', 'ENST00000530791.5_1_11:65687869-65688903:+|nuORF'] 44296 15417 ILDEAIYKV True PC9_epitope_Rep6 1062.5961119711399 1062.5950099358602 71.458 2 -0.00051597647706377 0.01002700429412546 0.07504402035295638 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 60598 5946 LHHDDPEVL True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 29.801 2 -0.0005218603727748442 0.01002700429412546 0.07505186588477968 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 96745 14269 SAMEVVPAL True NCI_RA007_Epitope_Rep4 915.4735543103099 915.47300496793 62.177 1 -0.0005251613898485184 0.01002700429412546 0.0750562677068767 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 36516 6053 GVGPVPARA True PC9_epitope_Rep1 822.47118624154 822.47008993586 28.096 2 -0.000546286056213118 0.010048694112439133 0.07508444161887949 ['ENSG00000129636|ENST00000320640|ITFG1'] 6593 16065 APVPGIPTA True PC9_epitope_Rep5 821.46470387877 821.46360993586 66.782 2 -0.0005581344647702802 0.010048694112439133 0.07510024737522641 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 23851 13465 EYIPKWEQF True NCI_RA007_Epitope_Rep5 1238.5971746003 1238.5960699358602 58.478 2 -0.0006263390460612889 0.010068599247621155 0.07519128200210685 ['ENSG00000114405|ENST00000462069|C3orf14'] 10996 11448 DALNIETAIK True NCI_RA007_Epitope_Rep2 1086.5920892198599 1086.59157496793 49.121 1 -0.0006271077349556783 0.010068599247621155 0.0751923084774051 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 107471 18855 SVMETFLLY True NCI_RA007_Epitope_Rep3 1101.5416338701298 1101.5405299358601 82.45 2 -0.0006421720141956296 0.010068599247621155 0.07521242686945498 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'nc|ENSG00000142733|O95382-2|MAP3K6'] 52555 9831 KLFVGGLK True PC9_epitope_Rep5 860.5483739330798 860.54726993586 42.783 2 -0.0006763281305261863 0.010068599247621155 0.07525805782150462 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 87365 20620 QPSSLLPLA True PC9_epitope_Rep3 924.5280324113199 924.52692993586 84.583 2 -0.0006838853515700852 0.010068599247621155 0.07526815678950799 ['ENSG00000117984|ENST00000236671|CTSD'] 115130 10369 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 47.583 2 -0.0007208742772493642 0.010068599247621155 0.07531760138258037 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 111177 7841 THGPPVQL True PC9_epitope_Rep6 847.45520182423 847.45410993586 39.555 2 -0.0007672202842709594 0.010068599247621155 0.07537958925102117 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 134593 5874 VYSHVIQKL True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 30.083 2 -0.0007735283607704316 0.010068599247621155 0.07538802934994239 ['ENSG00000135094|ENST00000257549|SDS'] 49150 3195 KELEKTYSA True NCI_RA007_Epitope_Rep3 1067.54989005471 1067.5487899358602 17.853 2 -0.0007835692394875101 0.010068599247621155 0.07540146537494687 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 98331 13435 SEWKFTITP True NCI_RA007_Epitope_Rep4 1107.56006081559 1107.5589699358602 58.865 2 -0.0008153072526138761 0.010068599247621155 0.07544394715804724 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 41525 20173 HYPPVQVLF True PC9_epitope_Rep1 1098.58621599378 1098.5851099358601 82.424 2 -0.0008499985324525824 0.010088495575221238 0.07549040299830173 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 42965 13329 IESPPEINT True PC9_epitope_Rep1 998.4920408254201 998.49094993586 56.129 2 -0.0009278242664908849 0.010088495575221238 0.07559470119379713 ['CON__P02668'] 57614 8016 LEEDHACIP True H1975_Epitope_Rep2 1025.4487961144498 1025.4476899358601 35.781 2 -0.0009660783997624353 0.010088495575221238 0.07564600811051149 ['ENSG00000167658|ENST00000309311|EEF2'] 97306 10215 SEALPSDIAA True H1975_Epitope_Rep2 972.47639076128 972.47528993586 44.297 2 -0.0009667804260617056 0.010088495575221238 0.07564694992710987 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 96724 20533 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.5635749679301 85.067 1 -0.0009668336217410115 0.010088495575221238 0.07564702129314255 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 71340 6966 LYQRAFQHL True NCI_RA007_Epitope_Rep3 1174.6247267608198 1174.62307490379 34.507 3 -0.0009678868006395191 0.010088495575221238 0.07564843422306283 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 64895 11386 LQEDPPAGV True PC9_epitope_Rep5 924.4552613938798 924.45416993586 48.794 2 -0.0009732571009126403 0.010088495575221238 0.07565563925766218 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 71448 18376 LYTGTVSSF True PC9_epitope_Rep5 973.47566248529 973.47456993586 75.702 2 -0.0009795405279505373 0.010088495575221238 0.07566407005401178 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 117029 8508 TVIAKVNNV True PC9_epitope_Rep3 956.5654805492 956.56438993586 37.685 2 -0.0009981033560003587 0.010088495575221238 0.07568898097361657 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 92990 6692 RPKPIITSV True PC9_epitope_Rep2 1009.62841515893 1009.62730993586 31.149 2 -0.0010108469952287173 0.010088495575221238 0.07570608631743804 ['ENSG00000168802|ENST00000448552|CHTF8'] 71288 20077 LYQDGVFKF True PC9_epitope_Rep3 1115.56514619603 1115.56404993586 82.478 2 -0.0010692469367769026 0.010108606693357518 0.07578451256378327 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 125009 13531 VIAENLEAA True PC9_epitope_Rep5 928.4865615221598 928.48546993586 57.07 2 -0.001089895054351602 0.010108606693357518 0.07581225620715912 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 71991 5513 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 26.218 2 -0.0010901499586343387 0.010108606693357518 0.07581259875562876 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 78493 7091 NYNNQSSNF True PC9_epitope_Rep6 1086.4366512076201 1086.43554993586 36.312 2 -0.001099122452296892 0.010108606693357518 0.0758246570358086 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 98987 9227 SHDFYSHEL True PC9_epitope_Rep2 1133.4777877436102 1133.47615490379 40.832 3 -0.0010994333046472243 0.010108606693357518 0.07582507482176877 ['ENSG00000095015|ENST00000399503|MAP3K1'] 2318 7029 AEPGALASA True H1975_Epitope_Rep2 785.39193286133 785.3913849679301 31.963 1 -0.0011426125469988712 0.010108606693357518 0.07588312498042082 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 29644 15803 FVIRNIVEA True PC9_epitope_Rep6 1059.6076797143498 1059.60658993586 73.044 2 -0.001154785869330959 0.010108606693357518 0.0758994969637569 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 85905 12557 QHFRNLEAL True PC9_epitope_Rep5 1126.5883412521 1126.58668490379 53.3 3 -0.001164331773391447 0.010108606693357518 0.07591233721416654 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 35764 18262 GTIGLIHAI True PC9_epitope_Rep3 893.53345214493 893.53234993586 75.453 2 -0.0012012322126621138 0.010108606693357518 0.07596198791243863 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 130514 4985 VSQEPFPNK True NCI_RA007_Epitope_Rep5 1044.5240096600398 1044.52290993586 25.879 2 -0.0012072386298765904 0.010128485813485482 0.07597007209704332 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 23835 16339 EYIKFLRSI True PC9_epitope_Rep6 1167.6651945904698 1167.66355490379 75.22 3 -0.0012090449061298737 0.010128485813485482 0.0759725033380052 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 82954 5658 PSEEREWDREK True H1975_Epitope_Rep3 1459.66917032359 1459.66753490379 26.793 3 -0.001239622079395758 0.010128485813485482 0.0760136691732619 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 96665 20111 SAISMGIVSV True PC9_epitope_Rep4 962.5106680950199 962.50956993586 85.491 2 -0.001272989097708313 0.010128485813485482 0.07605861051776809 ['ENSG00000092148|ENST00000399332|HECTD1'] 29636 18411 FVIRNIVEA True PC9_epitope_Rep1 1059.6076797143498 1059.60658993586 75.608 2 -0.0012872372676067476 0.010128485813485482 0.07607780730277504 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 134388 12663 VYPGDPLRF True NCI_RA007_Epitope_Rep5 1062.5498304850598 1062.5487299358601 55.363 2 -0.001311808665973757 0.010128485813485482 0.07611092148447454 ['ENSG00000170892|ENST00000396388|TSEN34'] 103623 7854 SPTGKEFVSA True PC9_epitope_Rep1 1021.5080252427299 1021.50692993586 35.037 2 -0.0013185436680531396 0.010128485813485482 0.0761199999909493 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766642-105766726:+|nuORF'] 7463 3950 ASASASLPTK True NCI_RA007_Epitope_Rep4 931.4974605590301 931.49636993586 21.43 2 -0.0013290062179466121 0.010128485813485482 0.07613410472933761 ['ENSG00000141568|ENST00000335255|FOXK2', 'ENST00000571989.1_1_17:80551586-80559372:+|nuORF', 'ENST00000473637.6_1_17:80553997-80559372:+|nuORF', 'ENST00000529652.1_1_17:80558017-80559372:+|nuORF'] 4154 8290 AHTAGVVL True PC9_epitope_Rep3 766.43373810366 766.43264993586 36.862 2 -0.0013361514463391265 0.010128485813485482 0.07614373848522192 ['ENSG00000183751|ENST00000568546|TBL3'] 71422 11537 LYTEKFEEF True NCI_RA007_Epitope_Rep3 1204.5652057656796 1204.5641099358602 52.509 2 -0.0013432134786678655 0.010128485813485482 0.07615326099005272 ['ENSG00000084652|ENST00000373610|TXLNA'] 102228 22226 SLSFDPLLI True PC9_epitope_Rep1 1003.5589981864299 1003.55790993586 90.315 2 -0.0013464890047048719 0.010149029319418034 0.0761576780480261 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL'] 96324 18217 RYSNLILNLF True NCI_RA007_Epitope_Rep5 1251.69755734791 1251.69646993586 76.881 2 -0.001369217958421884 0.010149029319418034 0.07618833354181212 ['ENSG00000078142|ENST00000262039|PIK3C3', 'ENST00000587328.2_1_18:39644671-39661098:+|nuORF'] 5911 16351 APGNPVLAV True PC9_epitope_Rep2 836.4756029156399 836.4750549679301 68.139 1 -0.001390433071972803 0.010149029319418034 0.07621695580984032 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 46719 23285 ITEC[Carbamidomethyl]LILL True PC9_epitope_Rep1 973.5518049104398 973.55125496793 94.353 1 -0.001396707545662666 0.010149029319418034 0.07622542256849658 ['OR2A12|p.V115L|1|0.29|ENSG00000221858|chr7:144095450-144095450|G/T|missense_variant'] 88662 2732 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 14.576 2 -0.0013997370382624597 0.010149029319418034 0.07622951081668335 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 108408 13950 SYLLQSTEL True NCI_RA007_Epitope_Rep3 1052.53899101784 1052.5378899358602 62.184 2 -0.001410353356888179 0.010149029319418034 0.07624383868569007 ['ENSG00000100599|ENST00000216487|RIN3', 'ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'nc|ENSG00000100599|Q8TB24-4|RIN3'] 105135 14932 SRFGKYFEI True PC9_epitope_Rep6 1145.58694426977 1145.58529490379 69.434 3 -0.001434940066311169 0.010149029319418034 0.0762770290504379 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 5009 22660 ALIDEQILCV True PC9_epitope_Rep5 1115.58964669171 1115.58854993586 92.163 2 -0.001483434662326963 0.010170465851555418 0.07634252594971115 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 54935 21588 KYPSPFFVF True PC9_epitope_Rep2 1130.5800679841798 1130.5794749679299 88.51 1 -0.001492003286067053 0.010170465851555418 0.07635410323955477 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 37974 14871 HAGVISVL True PC9_epitope_Rep3 794.46503823194 794.46394993586 62.338 2 -0.0015341554382049725 0.010170465851555418 0.07641107574013155 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 40436 10617 HRAPIFMRV True PC9_epitope_Rep2 1125.62295293901 1125.6213149037899 46.153 3 -0.001564650311584851 0.010191448910111863 0.07645231270741293 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 31635 13600 GEFGGFGSV True NCI_RA007_Epitope_Rep5 855.3762827971899 855.37518993586 59.0 2 -0.0015752826552744258 0.010191448910111863 0.07646669440715052 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 114759 6341 TQKSLSLSPG True NCI_RA007_Epitope_Rep2 1016.5502244078799 1016.5496749679301 29.271 1 -0.0015805660974056567 0.010191448910111863 0.0764738417581998 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 72968 19885 MQGPPLLTAA True PC9_epitope_Rep3 997.52665251233 997.52554993586 81.726 2 -0.0016141298904410958 0.010191448910111863 0.07651925826987413 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 111274 17002 THLLGVAL True PC9_epitope_Rep4 822.49633836022 822.49524993586 73.391 2 -0.0016300636200073486 0.010191448910111863 0.07654082608488424 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 29017 7440 FTENDKEYQEY True H1975_Epitope_Rep2 1464.6045043783597 1464.60340993586 33.563 2 -0.0016502423360807564 0.010212878838119239 0.07656814658962029 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 76783 12556 NRAEDSICL True PC9_epitope_Rep3 1019.4705941881899 1019.46948993586 53.317 2 -0.00165391019542564 0.010212878838119239 0.07657311340671889 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 107351 11540 SVLGQLGITK True NCI_RA007_Epitope_Rep5 1014.6073453611799 1014.60624993586 51.038 2 -0.0016640609694171 0.010212878838119239 0.07658686032627804 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 2833 13018 AEVDDILAA True H1975_Epitope_Rep1 915.4549270407099 915.4543749679301 55.157 1 -0.0016903953567862404 0.010228201559635055 0.07662253311037034 ['ENST00000482031.5_1_2:238973007-238991399:+|nuORF', 'nc|ENSG00000132330|Q96I15-2|SCLY', 'ENSG00000132330|ENST00000254663|SCLY'] 90878 4295 REVGSLGTSA True NCI_RA007_Epitope_Rep3 975.4985231881899 975.4974299358599 23.627 2 -0.0016972444978346978 0.010228201559635055 0.07663181310450388 ['ENSG00000185010|ENST00000360256|F8'] 124961 10546 VHSTNVLL True PC9_epitope_Rep5 881.49706663621 881.49596993586 45.554 2 -0.0017455339811139423 0.010228201559635055 0.07669726566594474 ['BACH1|p.P308Lfs*8|1|0.22|ENSG00000156273|chr21:29326746-29326746|C/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 124815 10493 VHGPPVQL True PC9_epitope_Rep2 845.47593726881 845.47484993586 45.684 2 -0.0017509348700265818 0.010228201559635055 0.07670458880911468 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 48225 21407 IYPWVHVVI True PC9_epitope_Rep5 1124.6382515666398 1124.6371499358602 87.406 2 -0.0017604975489136278 0.010228201559635055 0.07671755629955722 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 37838 9478 GYLAVAVVK True H1975_Epitope_Rep3 918.5538532363399 918.55274993586 41.462 2 -0.0017652668695303409 0.010228201559635055 0.07672402437540105 ['CON__Q29443', 'CON__Q0IIK2'] 5970 12385 APHPPLSVV True PC9_epitope_Rep2 915.51780208079 915.51670993586 52.948 2 -0.0017723980552469527 0.010228201559635055 0.07673369635536635 ['ENSG00000183856|ENST00000361170|IQGAP3'] 9738 19449 AYGSLFNTI True PC9_epitope_Rep6 984.4916469026 984.49054993586 87.474 2 -0.001781461139183074 0.010228201559635055 0.07674598990633405 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 102997 15706 SPFGTITSA True PC9_epitope_Rep4 879.43379767331 879.43324496793 68.34 1 -0.0017976474090480462 0.010228201559635055 0.07676794940855296 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 110606 12121 TFTFSHATF True NCI_RA007_Epitope_Rep5 1057.4868958753298 1057.48578993586 53.278 2 -0.0018230474501265738 0.010228201559635055 0.07680241872006888 ['ENSG00000204713|ENST00000377199|TRIM27'] 46949 19798 ITPENLPQI True PC9_epitope_Rep2 1023.5600608155898 1023.55947496793 81.543 1 -0.0018627589897557736 0.010228201559635055 0.07685633335133378 ['ENSG00000015479|ENST00000394805|MATR3'] 45188 21340 IPQSIIECV True PC9_epitope_Rep5 1000.5263181591599 1000.52522993586 87.143 2 -0.0018737059626851545 0.010228201559635055 0.07687120068508344 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 6408 7725 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 34.709 2 -0.0019141495002991382 0.010228201559635055 0.07692614711098313 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 115400 19212 TRLEMYNIL True PC9_epitope_Rep4 1151.6008800817501 1151.5997899358601 81.998 2 -0.0019495562459309788 0.010228201559635055 0.07697427530098151 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 127534 12275 VNQIGSVTESL True NCI_RA007_Epitope_Rep2 1145.59281749585 1145.59227496793 52.349 1 -0.00197024307596949 0.010228201559635055 0.07700240547981232 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 12611 10584 DLAGSIIGK True NCI_RA007_Epitope_Rep2 872.4967322830399 872.49562993586 45.768 2 -0.001988992632423857 0.010228201559635055 0.07702790814381735 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 73180 6042 MRVSDRQQL True PC9_epitope_Rep5 1131.5818759726699 1131.5802449037901 28.233 3 -0.0019930098080765354 0.010228201559635055 0.07703337304526262 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 57612 7801 LEEDHACIP True H1975_Epitope_Rep2 1025.4487961144498 1025.4476899358601 34.953 2 -0.002018318446727717 0.010228201559635055 0.07706780935016593 ['ENSG00000167658|ENST00000309311|EEF2'] 63672 23014 LMSLIINTF True PC9_epitope_Rep2 1050.57835373202 1050.5772499358602 94.017 2 -0.0020552741267825902 0.010228201559635055 0.07711811445356843 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 1294 7777 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 34.861 1 -0.0020606949118414956 0.010228201559635055 0.07712549549455247 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 85897 15666 QHFEHLAPVL True PC9_epitope_Rep1 1189.6243924076498 1189.6227449037901 65.08 3 -0.002072927367334601 0.010228201559635055 0.07714215342206414 ['ENSG00000010292|ENST00000315579|NCAPD2'] 28808 12223 FSVSPVVR True PC9_epitope_Rep1 889.5021520166499 889.50104993586 51.875 2 -0.0020785084182042245 0.010228201559635055 0.0771497545084126 ['ENSG00000167658|ENST00000309311|EEF2'] 141298 18162 YTDQAFFSF True H1975_Epitope_Rep2 1124.48147614172 1124.4803699358602 75.274 2 -0.0020835561404401676 0.010228201559635055 0.07715662972485414 ['ENSG00000169359|ENST00000643144|SLC33A1'] 142364 5401 YYEHVKARF True PC9_epitope_Rep6 1211.60874234351 1211.60710490379 28.663 3 -0.0020861985803295015 0.010228201559635055 0.07716022902982154 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 129727 16017 VRPVALVL True PC9_epitope_Rep6 865.5749230340899 865.57382993586 73.932 2 -0.00211231741883942 0.010228201559635055 0.07719581279666819 ['ENSG00000105464|ENST00000263269|GRIN2D', 'GRIN2D|p.R478Afs*15|1|0.33|ENSG00000105464|chr19:48414878-48414878|C/-|frameshift_variant'] 30273 20928 GAAAFFTAV True PC9_epitope_Rep2 853.4334037504899 853.4328549679301 85.946 1 -0.002113228942927898 0.010228201559635055 0.07719705486544144 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 75183 19014 NIANHFFTV True PC9_epitope_Rep2 1061.52942939365 1061.52887496793 78.502 1 -0.002114649150731882 0.010228201559635055 0.07719899011171562 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 107939 22053 SVWIGGSILA True PC9_epitope_Rep5 1001.5545815123298 1001.5540749679301 89.854 1 -0.002125843322779342 0.010228201559635055 0.07721424515309794 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000428275.1_1_X:53172047-53172134:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENSG00000181786|ENST00000324436|ACTL9'] 93395 7077 RQAPPHIEL True NCI_RA007_Epitope_Rep4 1059.58252759567 1059.5814299358601 33.845 2 -0.002136748432030963 0.010228201559635055 0.07722910849157605 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 6997 15996 AQLPLKVEV True PC9_epitope_Rep4 995.60153170475 995.60042993586 69.461 2 -0.0021416561352438526 0.010228201559635055 0.07723579826021357 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK', 'ENST00000485034.1_1_16:70512152-70512615:+|nuORF', 'ENST00000464499.5_1_16:70508533-70512710:+|nuORF'] 104645 21259 SQTDFSQLL True PC9_epitope_Rep1 1037.50293986229 1037.5023749679299 86.597 1 -0.002168909362267035 0.0102457658930819 0.07727295565238146 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 21139 2690 ERAPPQTHL True PC9_epitope_Rep1 1047.5461420869499 1047.54504993586 14.777 2 -0.0021803878774153043 0.0102457658930819 0.07728860970455885 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 89396 23272 QYAPLLAVF True PC9_epitope_Rep3 1020.5644179200399 1020.56332993586 94.793 2 -0.0021895163409624756 0.0102457658930819 0.07730106056248079 ['ENSG00000136261|ENST00000258761|BZW2'] 2984 16905 AFGYYGPLR True PC9_epitope_Rep1 1042.5236157372199 1042.5225099358602 69.849 2 -0.0021976368409243863 0.0102457658930819 0.07731213789060723 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 8634 5231 AVADAVIEK True NCI_RA007_Epitope_Rep3 914.50729696674 914.50618993586 27.581 2 -0.0022111242223566614 0.0102457658930819 0.07733053897212835 ['ENST00000369426.9_1_1:119575536-119588262:-|nuORF', 'ENSG00000116874|ENST00000235521|WARS2'] 125059 14286 VIDRNLLIL True NCI_RA007_Epitope_Rep4 1067.6702799709099 1067.66918993586 62.252 2 -0.0022178564226688355 0.0102457658930819 0.07733972509214354 ['ENSG00000153208|ENST00000295408|MERTK', 'ENST00000473065.1_1_2:112754988-112760808:+|nuORF'] 82604 6987 PQEEAPEV True H1975_Epitope_Rep3 897.4079768482899 897.40686993586 31.837 2 -0.00221998923427806 0.0102457658930819 0.07734263549838287 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 76347 18073 NPVDILTYV True H1975_Epitope_Rep3 1032.54916177872 1032.5485749679299 75.713 1 -0.002234342765875891 0.0102457658930819 0.077362224319275 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 116408 5831 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 27.823 2 -0.0022480249238577324 0.0102457658930819 0.07738090043002151 ['ENSG00000065183|ENST00000349139|WDR3'] 104697 20692 SQVAVAGLLTV True PC9_epitope_Rep4 1056.6179100448799 1056.61737496793 87.752 1 -0.0022509153879265932 0.0102457658930819 0.07738484634813877 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 43941 12467 IIDLVLDR True NCI_RA007_Epitope_Rep1 955.57023157647 955.56912993586 52.471 2 -0.002251626181387046 0.0102457658930819 0.077385816711722 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 114526 11140 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.4752299358599 50.628 2 -0.0022909565056444875 0.0102457658930819 0.07743952435993669 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 52386 8775 KKLPPLPSL True NCI_RA007_Epitope_Rep3 991.64300259391 991.64190993586 41.604 2 -0.0022975487642506193 0.0102457658930819 0.07744852923365539 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 85930 11009 QHGPPNIVV True PC9_epitope_Rep5 959.51886470995 959.51776993586 47.335 2 -0.002310267297677472 0.0102457658930819 0.07746590472515338 ['ENSG00000124209|ENST00000244040|RAB22A'] 40122 17592 HPYLFPVAA True PC9_epitope_Rep4 1013.5334521449298 1013.53234993586 75.682 2 -0.002313172425914148 0.0102457658930819 0.07746987400041801 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 20304 12885 ENTLQLVRNI True H1975_Epitope_Rep1 1198.6669854956199 1198.6658899358602 54.633 2 -0.0023581359505762765 0.0102457658930819 0.07753132751378025 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 32928 9425 GIAGSLKTV True PC9_epitope_Rep2 844.5018176634801 844.50072993586 41.593 2 -0.0023838978518660667 0.0102457658930819 0.07756655419723466 ['ENSG00000008083|ENST00000341776|JARID2'] 134415 20442 VYPGYYLTF True PC9_epitope_Rep6 1121.54334812229 1121.5422499358601 91.347 2 -0.002384154422771706 0.0102457658930819 0.07756690509254581 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 33089 23026 GIPDYFDIV True PC9_epitope_Rep2 1037.5069626135698 1037.50637496793 94.062 1 -0.002454400674046361 0.0102457658930819 0.07766302206278233 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'ENSG00000100393|ENST00000263253|EP300'] 67813 21530 LTAEDLFEA True PC9_epitope_Rep3 1007.4811417885498 1007.48004993586 88.109 2 -0.0024599123585651145 0.0102457658930819 0.07767056748194706 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 67450 10600 LSSQVGLTSV True PC9_epitope_Rep3 989.5393253710099 989.53822993586 45.72 2 -0.002471691173781798 0.010264447485762218 0.07768669439752526 ['nc|ENSG00000054523|O60333-3|KIF1B', 'KIF1B|p.E545*|1|0.07|ENSG00000054523|chr1:10295126-10295127|-/T|frameshift_variant', 'nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 99848 18010 SILGKFAVV True PC9_epitope_Rep6 932.5695033004798 932.56840993586 81.902 2 -0.002473915972619571 0.010264447485762218 0.07768974075945467 ['ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 53158 14511 KQADPFASL True PC9_epitope_Rep4 975.5025459394699 975.50144993586 63.731 2 -0.002478920672003194 0.010264447485762218 0.07769659390469935 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 34986 20239 GQSELTLLL True PC9_epitope_Rep6 972.54916177872 972.54861496793 90.533 1 -0.002489327561982313 0.010264447485762218 0.07771084597887663 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 77479 7054 NTAQGFRTV True PC9_epitope_Rep3 992.5039429218 992.50284993586 32.144 2 -0.002503291094260685 0.010264447485762218 0.07772997196459439 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 48985 8467 KEFIKIVEA True NCI_RA007_Epitope_Rep1 1075.62774645259 1075.62664993586 36.933 2 -0.0025194180442334843 0.010264447485762218 0.07775206568994678 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 70958 19777 LYGPSSVSF True PC9_epitope_Rep2 955.46509780159 955.46400993586 81.459 2 -0.0025414118566215267 0.010264447485762218 0.0777822046959987 ['ENSG00000149257|ENST00000358171|SERPINH1'] 60679 20288 LHMPFTIAA True PC9_epitope_Rep3 999.52117320907 999.52006993586 83.289 2 -0.002555417553986698 0.010264447485762218 0.07780140192805596 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 9490 11509 AVVPSTATV True PC9_epitope_Rep4 843.4701831820299 843.46963496793 52.031 1 -0.0025595513551529463 0.010264447485762218 0.07780706871126115 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 66560 22118 LSIEQLTTL True PC9_epitope_Rep2 1016.5753765265599 1016.5748749679301 90.553 1 -0.0025603333990304525 0.010264447485762218 0.07780814080444517 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 32111 13285 GETIFVTAP True H1975_Epitope_Rep2 933.48074786573 933.47964993586 56.23 2 -0.0025904860316125202 0.010264447485762218 0.07784948525861801 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 65368 17907 LRDQWFHSL True PC9_epitope_Rep5 1200.60399131624 1200.60235490379 73.896 3 -0.0026069232966231437 0.010264447485762218 0.07787203066309682 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP'] 71767 4343 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 21.82 2 -0.0026212965206167346 0.010264447485762218 0.07789174911838924 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 34831 12377 GQIQEAIAL True NCI_RA007_Epitope_Rep3 941.5181960036098 941.51708993586 55.882 2 -0.0026472474144240343 0.010264447485762218 0.07792736052136912 ['ENSG00000101193|ENST00000266069|GID8'] 49102 8420 KEIEYVETVTS True H1975_Epitope_Rep2 1296.6449126383598 1296.6438099358602 37.339 2 -0.002654581284191971 0.010264447485762218 0.07793742676410696 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 49460 9781 KEYILVEEA True H1975_Epitope_Rep2 1092.5702911461199 1092.56918993586 42.609 2 -0.0026736767556351116 0.010286294505882613 0.07796364128685829 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2', 'ENST00000478055.1_1_5:131553347-131562829:-|nuORF'] 133861 19585 VYGPLPQSF True PC9_epitope_Rep4 1006.5123823471798 1006.51187496793 83.456 1 -0.0026972280148413194 0.01030791303388147 0.07799598206945212 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 98334 12586 SEWLIRPP True NCI_RA007_Epitope_Rep5 996.5392658013599 996.53816993586 55.066 2 -0.002717205860336691 0.01030791303388147 0.07802342385885969 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 121980 9871 VFTSRSAAF True PC9_epitope_Rep4 984.5028802926398 984.50178993586 45.619 2 -0.002744274229164585 0.010327022375215147 0.07806061705652789 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 72902 18356 MPTLPPPSV True PC9_epitope_Rep4 937.49428975489 937.49318993586 78.674 2 -0.002768331505604015 0.010327022375215147 0.07809368425913932 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 73535 16258 MVPEDVPRL True PC9_epitope_Rep5 1054.5481162329 1054.5470099358602 67.528 2 -0.0027860877599334634 0.010327022375215147 0.07811809745622911 ['ENSG00000272333|ENST00000420124|KMT2B'] 108076 10781 SYANVQDGF True NCI_RA007_Epitope_Rep5 999.4297749220299 999.42866993586 48.105 2 -0.002795046266217485 0.010327022375215147 0.07813041678463346 ['ENSG00000152766|ENST00000371930|ANKRD22'] 32241 11656 GEYPATLV True H1975_Epitope_Rep2 848.4279840168799 848.42743496793 49.905 1 -0.0028141958117014177 0.010327022375215147 0.07815675534890729 ['ENSG00000108256|ENST00000225388|NUFIP2'] 37035 9495 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 41.491 2 -0.0028417966136168463 0.010327022375215147 0.07819472984527315 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 71248 21872 LYPLTNYTF True PC9_epitope_Rep2 1130.56481184286 1130.56427496793 89.605 1 -0.002852546125121063 0.010327022375215147 0.07820952335313457 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 31649 9979 GEFQSFSSA True NCI_RA007_Epitope_Rep3 958.4032258210199 958.40212993586 46.336 2 -0.002870386894081537 0.010327022375215147 0.07823408059460636 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 137774 12669 YEPPVQESV True PC9_epitope_Rep4 1046.49204082542 1046.49094993586 56.577 2 -0.00289354316222807 0.010327022375215147 0.07826596324425986 ['ENSG00000145425|ENST00000274065|RPS3A'] 64635 12016 LPTKDLLSA True PC9_epitope_Rep6 956.5542471591599 956.55314993586 57.507 2 -0.0029072431206794654 0.010327022375215147 0.07828483067627577 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3', 'C2CD3|p.I477Nfs*12|1|0.16|ENSG00000168014|chr11:74118318-74118319|-/T|frameshift_variant', 'ENST00000415191.6_1_11:73824618-73881837:-|nuORF'] 137760 4740 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 23.324 2 -0.002916776266133682 0.010327022375215147 0.07829796167174176 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 34832 12823 GQIQEAIAL True NCI_RA007_Epitope_Rep5 941.5181960036098 941.51708993586 56.005 2 -0.0029168786504690618 0.010327022375215147 0.07829810270550719 ['ENSG00000101193|ENST00000266069|GID8'] 41036 12992 HTILIVEKV True PC9_epitope_Rep5 1050.6437308699 1050.6426299358602 54.983 2 -0.00292564760449933 0.010327022375215147 0.07831018260440008 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF'] 25566 7649 FEKIEEVSA True H1975_Epitope_Rep3 1050.5233409537 1050.5222499358601 34.403 2 -0.0029350614237691015 0.01034680550653018 0.07832315244043778 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 1576 12919 AEEVSLISC True H1975_Epitope_Rep2 949.4426481048499 949.4415499358599 54.807 2 -0.0029515614171485953 0.01034680550653018 0.07834588917568473 ['ENST00000395949.2_1_11:31451062-31451945:+|nuORF', 'ENST00000530125.1_1_11:31438740-31451945:+|nuORF', 'ENSG00000170946|ENST00000465995|DNAJC24'] 54984 14950 KYQEVTNNLEF True PC9_epitope_Rep4 1383.6670450652698 1383.66594993586 65.445 2 -0.002983268349851695 0.01034680550653018 0.07838959500652727 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 6288 4701 APRGPGTVPA True PC9_epitope_Rep5 921.5032146458099 921.50210993586 23.133 2 -0.0029992755527355336 0.01034680550653018 0.07841166691814465 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 111207 12310 THISDTSVVL True PC9_epitope_Rep4 1070.56078909158 1070.56027496793 55.162 1 -0.0030267308029426642 0.01034680550653018 0.07844953530614458 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 46664 13894 ITDQGIEFY True H1975_Epitope_Rep3 1084.5076908895599 1084.50717496793 58.754 1 -0.0030309903625163103 0.01034680550653018 0.0784554116703448 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF'] 133903 15031 VYIDQTMVL True NCI_RA007_Epitope_Rep3 1080.5525329069999 1080.5514299358601 66.585 2 -0.0030338879232112855 0.01034680550653018 0.07845940925292924 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 41194 8347 HVIETLTKT True PC9_epitope_Rep5 1040.5866099165999 1040.58550993586 37.047 2 -0.0030487656026640833 0.01034680550653018 0.07847993750595207 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 71722 9618 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 41.972 2 -0.003062923607636011 0.01034680550653018 0.07849947656352921 ['ENSG00000026025|ENST00000544301|VIM'] 139971 9572 YQDLLNVK True NCI_RA007_Epitope_Rep1 991.5338460677499 991.53274993586 41.232 2 -0.003073525805618975 0.01034680550653018 0.07851411078866546 ['ENSG00000026025|ENST00000544301|VIM', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 118416 13569 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47054993586 60.087 2 -0.0030829021996133313 0.01036818071518387 0.07852705477301129 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 114548 7527 TQAPQPAQV True PC9_epitope_Rep5 938.4821448480599 938.48104993586 33.902 2 -0.00308524442764701 0.01036818071518387 0.07853028844157924 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 16341 9541 EEIAETLAS True H1975_Epitope_Rep2 961.4604063439699 961.45930993586 41.671 2 -0.0030877054330805645 0.01036818071518387 0.07853368620330942 ['nc|ENSG00000122188|Q8IWV1-3|LAX1', 'ENSG00000122188|ENST00000442561|LAX1', 'LAX1|p.A199S|1|0.09|ENSG00000122188|chr1:203774079-203774079|G/T|missense_variant', 'nc|ENSG00000122188|Q8IWV1-2|LAX1'] 71417 22854 LYTDIINIF True PC9_epitope_Rep4 1110.5961119711399 1110.5950099358602 96.13 2 -0.0031081289901366458 0.010383597883597884 0.07856188811268001 ['ENST00000533377.1_1_8:145066406-145067006:+|nuORF', 'ENSG00000178719|ENST00000395068|GRINA'] 107970 9071 SVYSDIVGK True NCI_RA007_Epitope_Rep4 966.5022115862998 966.50110993586 41.724 2 -0.003116796686321992 0.010383597883597884 0.07857385925777993 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 48186 20449 IYPSIFHVL True PC9_epitope_Rep4 1087.60661708519 1087.6055299358602 86.801 2 -0.003134056620262887 0.010383597883597884 0.07859770148326285 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9'] 110932 6911 THAAALSV True PC9_epitope_Rep1 768.41300265908 768.41190993586 31.39 2 -0.0031601906699118315 0.010383597883597884 0.07863381260383698 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 56011 19533 LASLLLQI True PC9_epitope_Rep6 869.55860426361 869.55805496793 87.798 1 -0.00316889643870979 0.010383597883597884 0.07864584474737454 ['nc|ENSG00000001631|O00522-2|KRIT1', 'ENST00000486261.5_1_7:91830052-91864980:-|nuORF', 'ENST00000475770.5_1_7:91830052-91864980:-|nuORF', 'ENSG00000001631|ENST00000394505|KRIT1', 'nc|ENSG00000001631|O00522-3|KRIT1'] 108791 13378 SYTRLFSNF True NCI_RA007_Epitope_Rep4 1133.5505587610498 1133.54946993586 58.626 2 -0.003169678497873235 0.010383597883597884 0.0786469256912774 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 97897 7602 SELVSNGV True H1975_Epitope_Rep3 803.40249754503 803.40140993586 34.222 2 -0.003177399543531792 0.010383597883597884 0.07865759814959679 ['ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 110291 10854 TESPCALVA True H1975_Epitope_Rep2 889.4215187374499 889.4209649679301 46.779 1 -0.0032000694647397244 0.010383597883597884 0.07868894016991065 ['ENSG00000166598|ENST00000299767|HSP90B1'] 17708 7631 EHNIFHNEV True PC9_epitope_Rep2 1137.5203212619301 1137.51868490379 34.723 3 -0.0032154227582318964 0.010383597883597884 0.07871017209644188 ['ENSG00000118898|ENST00000345988|PPL'] 72971 13720 MQHENVIGL True PC9_epitope_Rep1 1039.51206507735 1039.5109699358602 57.623 2 -0.003234032483620465 0.010383597883597884 0.07873591318078314 ['nc|ENSG00000156711|O15264-2|MAPK13', 'ENSG00000156711|ENST00000211287|MAPK13'] 122400 15510 VGDPSVHLL True PC9_epitope_Rep3 935.5076313199099 935.50652993586 64.81 2 -0.003235866404762428 0.010383597883597884 0.0787384502196995 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 72281 14852 MIAQTVTAV True PC9_epitope_Rep2 932.50010341132 932.49900993586 62.393 2 -0.003262371348942684 0.010383597883597884 0.07877512402507561 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENST00000463551.1_1_X:118604271-118605018:+|nuORF', 'ENSG00000169100|ENST00000381401|SLC25A6'] 10104 15366 AYTTVLQEW True NCI_RA007_Epitope_Rep3 1109.5393253710097 1109.53822993586 68.001 2 -0.0032703212176978837 0.010383597883597884 0.07878612647665527 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 119635 8257 VATVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 41.357 2 -0.003270851623873263 0.010383597883597884 0.07878686058945178 ['CON__P00761'] 17570 9891 EHGPNPIL True PC9_epitope_Rep5 875.45011644379 875.44900993586 43.016 2 -0.003270953475346671 0.010383597883597884 0.07878700155837465 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 132946 14105 VVPAALKVV True PC9_epitope_Rep2 894.59023874506 894.58914993586 59.529 2 -0.003288762154126148 0.010383597883597884 0.07881165286614254 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 49918 14166 KIIYIVHDEV True PC9_epitope_Rep1 1227.6863239578702 1227.68467490379 59.311 3 -0.0032926124749122552 0.010383597883597884 0.07881698337039535 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3'] 32247 6945 GEYSGIEHV True NCI_RA007_Epitope_Rep4 989.44542498617 989.44432993586 33.339 2 -0.0033230040410077476 0.010383597883597884 0.07885906807057605 ['ENST00000558509.5_1_15:78453927-78455839:+|nuORF', 'ENST00000559889.5_1_15:78449787-78454580:+|nuORF', 'nc|ENSG00000166411|P50213-2|IDH3A', 'ENSG00000166411|ENST00000299518|IDH3A'] 75412 12592 NIVHDLPAA True PC9_epitope_Rep5 948.5028802926399 948.50178993586 53.435 2 -0.0033230250181873976 0.010383597883597884 0.0788590971246382 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1', 'ENST00000411828.5_1_21:40547518-40555177:-|nuORF'] 11723 10690 DHARTITVAL True PC9_epitope_Rep4 1095.60365696307 1095.60254993586 48.87 2 -0.003331122935130822 0.010383597883597884 0.07887031360846398 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 101965 22257 SLQFIPILI True PC9_epitope_Rep4 1042.6426682407398 1042.6415699358602 93.851 2 -0.0033466271347533383 0.010383597883597884 0.07889179198859857 ['ENSG00000260286|ENST00000565469|ARMH2'] 115854 7811 TSDYVSQSY True H1975_Epitope_Rep2 1048.43491987212 1048.43382993586 34.992 2 -0.0033539572308823678 0.010383597883597884 0.07890194812107046 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 96969 20200 SAYEFVTWL True H1975_Epitope_Rep2 1114.5335117145798 1114.5324099358602 83.702 2 -0.003372607882571923 0.010383597883597884 0.0789277938253884 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'ENST00000593636.1_1_19:50321571-50322554:+|nuORF'] 99983 9241 SIPGGPVRL True H1975_Epitope_Rep3 894.52870111766 894.52760993586 40.537 2 -0.0033757121951383225 0.010383597883597884 0.07893209634800248 ['CON__P12763'] 47773 24005 IYEPNFIFF True PC9_epitope_Rep5 1188.5855472874398 1188.5849749679298 97.318 1 -0.0033887738493237414 0.010383597883597884 0.07895020153350579 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 88212 8161 QSAEELLAQ True H1975_Epitope_Rep3 987.4872897981497 987.48674496793 36.37 1 -0.003393027684828453 0.010383597883597884 0.07895609859847105 ['CCDC150|p.Q273E|1|0.2|ENSG00000144395|chr2:196666773-196666773|C/G|missense_variant'] 141651 13781 YTSPVNPAV True PC9_epitope_Rep1 946.47599683846 946.47488993586 57.855 2 -0.0033995234680781012 0.010383597883597884 0.07896510431032275 ['ENSG00000134825|ENST00000537328|TMEM258'] 110165 16299 TEPNSFLTI True NCI_RA007_Epitope_Rep5 1020.5127762699999 1020.51166993586 69.449 2 -0.003400920109577821 0.010383597883597884 0.0789670407075208 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 84396 12309 QAALEFHGV True PC9_epitope_Rep6 970.4872302284999 970.48612993586 58.74 2 -0.003417911098080236 0.010383597883597884 0.07899060105480542 ['ENSG00000187231|ENST00000428443|SESTD1'] 119647 21405 VAVAGLLTV True PC9_epitope_Rep5 841.52730413533 841.5267549679301 87.398 1 -0.0034466345789629454 0.01040518495657158 0.0790304423272813 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 8402 6990 ATLSICSPK True NCI_RA007_Epitope_Rep3 918.4844533471801 918.48334993586 34.604 2 -0.0034513968620063884 0.01040518495657158 0.079037049395757 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 100425 12716 SLAEGLRTV True PC9_epitope_Rep3 944.52909504048 944.52798993586 53.934 2 -0.0034894907569460475 0.01042631045276198 0.07908991506308254 ['ENSG00000111331|ENST00000228928|OAS3', 'OAS3|p.G257C|1|0.08|ENSG00000111331|chr12:112946875-112946875|G/T|missense_variant'] 34820 18433 GQIEVVPEV True PC9_epitope_Rep4 968.5178616504398 968.51731496793 78.971 1 -0.0034911126016932336 0.01042631045276198 0.07909216641398548 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 26170 5575 FHDESTQV True PC9_epitope_Rep1 961.41412485789 961.41302993586 26.272 2 -0.0035311151496494734 0.01042631045276198 0.07914771112112669 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 47476 19483 IVPEGGILQI True PC9_epitope_Rep6 1037.6120963884498 1037.61098993586 87.604 2 -0.0035345529067791186 0.01042631045276198 0.07915248593659646 ['ENSG00000163661|ENST00000295927|PTX3'] 121196 8314 VESPESLAA True H1975_Epitope_Rep1 901.4392769765699 901.43872496793 36.911 1 -0.0035441985957389457 0.010440758607017776 0.079165884329609 ['ENSG00000052749|ENST00000370992|RRP12'] 26151 20998 FGYVDFESA True PC9_epitope_Rep3 1033.4392769765698 1033.43877496793 86.045 1 -0.0035538236572508703 0.010440758607017776 0.07917925579567633 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 132911 10957 VVLYPLVAK True NCI_RA007_Epitope_Rep3 1000.6321035570398 1000.63100993586 50.186 2 -0.003567887547737788 0.010440758607017776 0.0791987969353318 ['ENSG00000110711|ENST00000279146|AIP'] 136979 12368 YAIGNAPEL True H1975_Epitope_Rep3 946.4759968384599 946.47488993586 52.76 2 -0.003574207038474073 0.010440758607017776 0.07920757878047166 ['BAP1|p.G554Vfs*17|1|0.73|ENSG00000163930|chr3:52403484-52403484|C/-|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 115667 8566 TRYQIPKEV True PC9_epitope_Rep2 1132.6240580544797 1132.62241490379 38.309 3 -0.0035985909556739267 0.010440758607017776 0.07924147072247205 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 12461 18738 DIYLPIANV True H1975_Epitope_Rep2 1016.55424715916 1016.55314993586 77.781 2 -0.0036071537550150154 0.010440758607017776 0.0792533750411461 ['ENSG00000120837|ENST00000240055|NFYB'] 2196 13959 AELYGPFTSA True H1975_Epitope_Rep3 1054.49712620586 1054.49657496793 59.01 1 -0.0036255178643142456 0.010440758607017776 0.07927891010410566 ['ENSG00000169217|ENST00000305596|CD2BP2'] 77968 17329 NVLYENPNL True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 74.662 2 -0.003648016601771444 0.010440758607017776 0.07931020287359128 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 9984 12019 AYPHNLMTF True NCI_RA007_Epitope_Rep5 1092.50625142092 1092.5051499358601 52.89 2 -0.0036504483969112965 0.010440758607017776 0.07931358574354952 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 118360 18915 TYNMVLNLL True NCI_RA007_Epitope_Rep3 1079.56851732431 1079.56740993586 82.69 2 -0.0036545777101529117 0.010440758607017776 0.07931933028299465 ['ENSG00000039123|ENST00000230640|MTREX'] 1884 4847 AEIEHKVIEA True H1975_Epitope_Rep3 1137.60298825673 1137.60133490379 23.769 3 -0.003682358281799905 0.010440758607017776 0.07935798578396178 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 103614 10547 SPTELPSA True PC9_epitope_Rep5 800.39159850816 800.39050993586 45.558 2 -0.0036947740083974625 0.010440758607017776 0.07937526639420696 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11', 'ENST00000488544.1_1_20:3209968-3210393:-|nuORF'] 35070 7740 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42828993586 39.131 2 -0.0037065852277243564 0.010440758607017776 0.07939170829646522 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 121199 8470 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43816993586 37.531 2 -0.003711054995955394 0.010440758607017776 0.07939793115079351 ['ENSG00000052749|ENST00000370992|RRP12'] 43852 6046 IHSQPQPAL True PC9_epitope_Rep4 989.5294293936498 989.52832993586 30.247 2 -0.003713293452026972 0.010440758607017776 0.07940104769072169 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 62729 15479 LLLPGELA True H1975_Epitope_Rep2 824.5007550343199 824.50020496793 64.696 1 -0.0037178564125073996 0.010440758607017776 0.07940740086232534 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENST00000600318.1_1_19:58600016-58609306:-|nuORF', 'ENST00000598497.1_1_19:58600016-58601841:-|nuORF', 'ENST00000594191.5_1_19:58598487-58609571:-|nuORF', 'nc|ENSG00000121413|Q8TBC5-4|ZSCAN18', 'ZSCAN18|p.G368Efs*61|1|0.38|ENSG00000121413|chr19:58085115-58085115|C/-|frameshift_variant', 'nc|ENSG00000121413|Q8TBC5-2|ZSCAN18', 'ENSG00000121413|ENST00000601144|ZSCAN18', 'nc|ENSG00000121413|Q8TBC5-3|ZSCAN18', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 132218 17576 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 72.795 2 -0.0037191382049336264 0.010440758607017776 0.07940918561712884 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 120432 5210 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.42324993586 25.128 2 -0.0037766821069300256 0.010440758607017776 0.07948934069618359 ['nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 89811 12105 RALNQEQVIAV True PC9_epitope_Rep4 1239.6935345966301 1239.6924299358602 54.365 2 -0.0038042508590945857 0.010440758607017776 0.07952776411584468 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 8531 8037 ATTDELKTV True PC9_epitope_Rep1 976.50769088956 976.50658993586 35.736 2 -0.0038162945040372837 0.010440758607017776 0.07954455416074055 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 120185 9009 VEAPPVVTA True H1975_Epitope_Rep1 881.4858332461699 881.48472993586 39.557 2 -0.003833272512024551 0.010440758607017776 0.07956822779304554 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 7052 9489 AQQPTAVQV True PC9_epitope_Rep2 940.4977949121998 940.49668993586 41.839 2 -0.0038552936732636827 0.010440758607017776 0.07959894145379567 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 118615 15822 TYSHGNYLF True PC9_epitope_Rep3 1100.49270953176 1100.4916099358602 66.014 2 -0.0038575528490660885 0.010440758607017776 0.07960209291425656 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 130132 4870 VSDSGAHVL True NCI_RA007_Epitope_Rep3 883.43994568291 883.43884993586 26.14 2 -0.003860679729984556 0.010440758607017776 0.07960645494586743 ['ENSG00000064102|ENST00000261191|INTS13'] 87166 7080 QPFPAHIGRSA True PC9_epitope_Rep4 1179.61489035311 1179.61324490379 34.5 3 -0.003861446324691489 0.010440758607017776 0.07960752438133159 ['nc|ENSG00000139436|Q14161-3|GIT2', 'ENSG00000139436|ENST00000355312|GIT2', 'nc|ENSG00000139436|Q14161-4|GIT2'] 48486 5531 KAFSQSTSL True NCI_RA007_Epitope_Rep3 967.49746055903 967.49636993586 28.753 2 -0.003866658641581515 0.010440758607017776 0.07961479609765469 ['ENSG00000179195|ENST00000337815|ZNF664'] 78344 14388 NYKDLNGNVF True PC9_epitope_Rep2 1182.5669371011797 1182.5658499358601 60.605 2 -0.0038820548289265817 0.010440758607017776 0.07963627831513087 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 137343 4790 YDLNKPEAEPK True H1975_Epitope_Rep3 1302.6455813446998 1302.64393490379 23.552 3 -0.0038841926024910955 0.010440758607017776 0.07963926148856404 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 109014 21350 TAIDILTTC True PC9_epitope_Rep1 949.4790336135701 949.47792993586 86.953 2 -0.0039029336168010095 0.010440758607017776 0.07966541743707505 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 43490 16192 IGLFGGAGVGK True PC9_epitope_Rep5 974.5549158654998 974.55380993586 67.272 2 -0.0039144196513155585 0.010440758607017776 0.07968145119029395 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 6011 9260 APITGQVSA True PC9_epitope_Rep5 842.4497820906199 842.44868993586 40.567 2 -0.003920421225599201 0.010440758607017776 0.07968982997431125 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 101492 21247 SLLDKIIGA True PC9_epitope_Rep1 928.5593325396 928.55822993586 86.55 2 -0.003927029493426761 0.010440758607017776 0.07969905653888147 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 138331 13257 YHEDIHTYL True PC9_epitope_Rep3 1189.54038800017 1189.53874490379 56.025 3 -0.0039354325168704735 0.010440758607017776 0.07971079014506638 ['ENSG00000145386|ENST00000274026|CCNA2'] 27267 14344 FLQDYFDGNLK True NCI_RA007_Epitope_Rep1 1358.65066672514 1358.6495699358602 59.833 2 -0.003957183433795378 0.01044736726344961 0.07974116827000331 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 88592 18701 QTDPTLLSV True PC9_epitope_Rep4 972.5127762699999 972.51222496793 80.015 1 -0.003977621302723698 0.01044736726344961 0.07976972058693138 ['ENSG00000144867|ENST00000678299|SRPRB'] 114699 15239 TQIDHYVGI True PC9_epitope_Rep1 1044.52400966004 1044.52347496793 63.436 1 -0.003989549656364375 0.01044736726344961 0.07978638845693037 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 57533 9465 LEDPSQLPP True H1975_Epitope_Rep3 994.49712620586 994.49602993586 41.411 2 -0.003993026832398986 0.01044736726344961 0.07979124772595446 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 102965 8566 SPFAEGTSA True PC9_epitope_Rep4 865.38176210045 865.3812149679301 40.429 1 -0.003996386640185059 0.01044736726344961 0.07979594319001619 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 31582 12609 GEELSPPLP True H1975_Epitope_Rep3 937.4756624852898 937.47511496793 53.705 1 -0.004002570202800223 0.01044736726344961 0.0798045855135452 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 43365 6878 IGAEVYHNLK True PC9_epitope_Rep4 1142.60840799034 1142.6067749037902 33.676 3 -0.004031037800093405 0.01044736726344961 0.0798443818438605 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 104763 12823 SQVVQVVL True NCI_RA007_Epitope_Rep4 870.5174677276198 870.51636993586 56.406 2 -0.004053369290877971 0.01044736726344961 0.07987561077891074 ['ENSG00000102753|ENST00000261667|KPNA3'] 103741 13256 SPVPIAPTA True PC9_epitope_Rep2 851.47526856247 851.47416993586 56.264 2 -0.004090578049905464 0.01044736726344961 0.07992766514873789 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 54369 11482 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.5338699358601 49.485 2 -0.0040967103076232055 0.01044736726344961 0.0799362465455183 ['ENSG00000123975|ENST00000314355|CKS2'] 106434 5775 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 29.697 3 -0.004126019501656271 0.01044736726344961 0.07997727112495684 ['ENSG00000058729|ENST00000283109|RIOK2'] 96840 6429 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42883496793 29.535 1 -0.004126115754997222 0.01044736726344961 0.07997740587882864 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 135171 9383 WEQANVLRP True H1975_Epitope_Rep2 1111.57744221523 1111.5763499358602 41.054 2 -0.004130588388947212 0.01044736726344961 0.07998366771973674 ['ENST00000576250.5_1_16:3109019-3109328:-|nuORF'] 108645 10739 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59198993586 46.299 2 -0.0041516065796577215 0.01044736726344961 0.08001309891048812 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 5810 7101 APELAPLK True H1975_Epitope_Rep3 837.4960040070499 837.49490993586 32.284 2 -0.004165203217779521 0.01044736726344961 0.08003214230176027 ['nc|ENSG00000125868|P60981-2|DSTN', 'ENSG00000125868|ENST00000246069|DSTN'] 116515 17097 TTSDIDYAL True PC9_epitope_Rep4 997.46040634397 997.45985496793 73.762 1 -0.0041851959963470405 0.01044736726344961 0.08006015037112092 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 93690 8392 RQTVAVGVI True NCI_RA007_Epitope_Rep4 941.5658149023698 941.56470993586 39.095 2 -0.004189805819423797 0.01044736726344961 0.08006660937445194 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF', 'ENST00000547505.2_1_12:44054544-44054901:+|nuORF'] 392 16168 AALDIYETL True NCI_RA007_Epitope_Rep5 1007.51752729727 1007.51642993586 68.927 2 -0.00419493758356704 0.01044736726344961 0.08007380015678361 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 140028 6301 YQEGAKMAV True PC9_epitope_Rep4 995.4746169394698 995.47350993586 31.298 2 -0.004226615917216531 0.01044736726344961 0.08011819968426727 ['ENSG00000173801|ENST00000393931|JUP'] 28959 13121 FTDTSLMY True H1975_Epitope_Rep3 976.42118438428 976.42063496793 55.715 1 -0.004230715888038026 0.01044736726344961 0.08012394746704189 ['nc|ENSG00000177426|Q15583-4|TGIF1', 'ENSG00000177426|ENST00000343820|TGIF1', 'nc|ENSG00000177426|Q15583-3|TGIF1', 'nc|ENSG00000177426|Q15583|TGIF1'] 27272 19750 FLQEQLVEL True PC9_epitope_Rep6 1117.60192562757 1117.60082993586 88.628 2 -0.00423502228194267 0.01044736726344961 0.08012998497426553 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 8766 10261 AVDGNTVEL True NCI_RA007_Epitope_Rep1 916.45017601344 916.44962496793 43.923 1 -0.004248535495289412 0.01044736726344961 0.08014893257035102 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 131072 9271 VTDSTQVNV True PC9_epitope_Rep1 961.47163973401 961.47054993586 40.513 2 -0.004252075523717298 0.01044736726344961 0.08015389679682047 ['ENST00000420642.1_7:74765936-74789271:+|nuORF', 'nc|ENSG00000274523|Q96I51-3|RCC1L', 'ENSG00000274523|ENST00000610322|RCC1L', 'nc|ENSG00000274523|Q96I51-2|RCC1L'] 139556 8645 YLTTAVITNK True NCI_RA007_Epitope_Rep2 1122.62847472858 1122.62736993586 38.273 2 -0.004255284501729744 0.01044736726344961 0.080158396989495 ['ENSG00000104408|ENST00000220849|EIF3E'] 132453 14494 VVDAVVTQV True PC9_epitope_Rep4 928.5229470308799 928.52184993586 63.662 2 -0.004273807745966386 0.01044736726344961 0.0801843772982074 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 49223 6852 KENPYEDIP True H1975_Epitope_Rep1 1103.51350454599 1103.5124099358602 31.4 2 -0.004312922594634224 0.01044736726344961 0.08023926002406166 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C', 'ENST00000481894.1_1_1:115138166-115167938:-|nuORF'] 114094 22242 TPFTGPFISV True PC9_epitope_Rep3 1064.55424715916 1064.5531499358601 90.84 2 -0.004321004103440117 0.01044736726344961 0.08025060289505968 ['ENSG00000164142|ENST00000435205|FHIP1A'] 72057 19765 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55707496793 81.999 1 -0.004387150288664203 0.01044736726344961 0.08034348884390814 ['ENSG00000198712|ENST00000361739|MT-CO2'] 39950 12052 HPKYSDMIVA True PC9_epitope_Rep1 1159.56957995347 1159.56848993586 51.217 2 -0.0043927935543597715 0.01044736726344961 0.08035141720230207 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 17479 7002 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.53465490379 31.738 3 -0.004398397172263446 0.01044736726344961 0.08035929044796371 ['ENSG00000162378|ENST00000294353|ZYG11B'] 31288 20627 GDIEQFLITG True PC9_epitope_Rep5 1091.54989005471 1091.5487899358602 84.392 2 -0.004405891928223525 0.01044736726344961 0.08036982171555183 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 93394 6415 RQAPPHIEL True NCI_RA007_Epitope_Rep3 1059.58252759567 1059.5814299358601 32.244 2 -0.004412591391419937 0.01044736726344961 0.08037923636570404 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 121325 9192 VEVDAAVTP True H1975_Epitope_Rep2 899.4600124211499 899.4594649679301 40.31 1 -0.004413825640490262 0.01044736726344961 0.08038097092807661 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 748 15983 AAVPGKTFVNI True PC9_epitope_Rep1 1115.63389446219 1115.63278993586 66.288 2 -0.004435987787616757 0.01044736726344961 0.08041212153898193 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 86191 19918 QIGAKFWEV True PC9_epitope_Rep1 1076.5654805492 1076.5643899358602 81.433 2 -0.004449074593408309 0.01044736726344961 0.08043052037118799 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 25444 16127 FEEDGLGVLP True H1975_Epitope_Rep2 1074.5233409536997 1074.52277496793 67.245 1 -0.0044648647467252925 0.01044736726344961 0.0804527241243532 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 118097 16316 TYGGSWKF True PC9_epitope_Rep5 944.43921740692 944.43812993586 67.756 2 -0.0044708827382953405 0.01044736726344961 0.08046118771459493 ['nc|ENSG00000146416|Q9NVV5-6|AIG1', 'nc|ENSG00000146416|Q9NVV5-5|AIG1', 'nc|ENSG00000146416|Q9NVV5-3|AIG1', 'nc|ENSG00000146416|Q9NVV5-4|AIG1', 'ENSG00000146416|ENST00000357847|AIG1', 'nc|ENSG00000146416|Q9NVV5-1|AIG1'] 40477 9634 HRDGEFQEL True PC9_epitope_Rep3 1129.51523588149 1129.5141299358602 42.007 2 -0.0044767792097988235 0.01044736726344961 0.08046948105860847 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 6986 22419 AQLGGVLLL True PC9_epitope_Rep1 882.5538532363399 882.55274993586 91.054 2 -0.004487643126274574 0.01044736726344961 0.08048476278131823 ['nc|ENSG00000237515|B4DS77-3|SHISA9', 'SHISA9|p.A335Gfs*5|1|0.83|ENSG00000237515|chr16:13235134-13235135|-/G|frameshift_variant', 'ENSG00000237515|ENST00000558583|SHISA9'] 2551 12951 AEQPYFIEA True H1975_Epitope_Rep3 1066.49712620586 1066.4960299358602 55.048 2 -0.004491767802336747 0.01044736726344961 0.08049056533333374 ['ENSG00000123607|ENST00000243344|TTC21B'] 38915 18286 HHFPGPLLV True PC9_epitope_Rep3 1015.5603355991099 1015.55922993586 75.543 2 -0.0045013302778850175 0.01044736726344961 0.08050401895068159 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'nc|ENSG00000140525|Q9NVI1-4|FANCI'] 138390 17110 YHGLTVPL True PC9_epitope_Rep5 898.4912529797799 898.49014993586 70.836 2 -0.0045114090537641685 0.01044736726344961 0.08051820081266822 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 111187 19295 THIETVINAL True PC9_epitope_Rep3 1109.60807363717 1109.6069699358602 79.439 2 -0.004517395823701341 0.01044736726344961 0.0805266257065155 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENST00000524952.2_1_11:985541-988707:+|nuORF'] 65325 8220 LRDEHNYTL True PC9_epitope_Rep5 1159.56218607391 1159.56108993586 36.557 2 -0.004525267524982291 0.01044736726344961 0.08053770419468273 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 54882 17418 KYPHYFPVM True PC9_epitope_Rep5 1180.57393705792 1180.5722849037902 71.999 3 -0.004542626947588029 0.01044736726344961 0.08056213962742288 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 13731 9921 DQAAEGINLIK True H1975_Epitope_Rep1 1170.6244519773002 1170.62334993586 43.096 2 -0.0045767553229096635 0.01044736726344961 0.0806101957851655 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000498505.5_1_3:139068252-139075853:+|nuORF'] 48995 8173 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 38.12 2 -0.004577629622860819 0.01044736726344961 0.0806114271732199 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 110986 5009 THAPATLEA True PC9_epitope_Rep4 909.45559574705 909.45448993586 25.888 2 -0.004579861155281532 0.01044736726344961 0.08061457018963292 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 35600 15882 GTASGFYTV True PC9_epitope_Rep2 901.4181476091701 901.41704993586 66.345 2 -0.004619950514012622 0.01044736726344961 0.08067105019402766 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 131290 12884 VTGAVVTAV True PC9_epitope_Rep4 815.47526856247 815.47472496793 57.434 1 -0.004667585692425015 0.01044736726344961 0.08073820027965864 ['ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 48224 20398 IYPWVHVVI True PC9_epitope_Rep4 1124.6382515666398 1124.6371499358602 86.608 2 -0.00469692104122135 0.01044736726344961 0.08077957471569504 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 104060 16601 SQDPTMIGV True PC9_epitope_Rep1 946.44298245802 946.44243496793 68.68 1 -0.004704081413284136 0.01044736726344961 0.08078967611841739 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 64248 21281 LPHFILVEC True PC9_epitope_Rep5 1069.56303802105 1069.5619499358602 86.91 2 -0.004755305459974646 0.01044736726344961 0.08086196780490087 ['ENSG00000051382|ENST00000674063|PIK3CB'] 35014 9397 GQTQVEIKV True PC9_epitope_Rep4 1000.5553097883198 1000.55420993586 43.753 2 -0.00476767235060265 0.01044736726344961 0.08087942837151406 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000432228.1_1_2:222827655-222828180:+|nuORF'] 74218 7374 NEGVATYAAA True H1975_Epitope_Rep2 965.4454249861698 965.44432993586 33.305 2 -0.004768680615761226 0.01044736726344961 0.08088085204740406 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 90499 4219 RELEVQHPAA True H1975_Epitope_Rep2 1148.59382055536 1148.59272993586 21.336 2 -0.004779787789156886 0.01044736726344961 0.0808965366979316 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 30443 19491 GAFGFQLKEV True PC9_epitope_Rep2 1094.5760452328998 1094.57494993586 80.354 2 -0.004781734788973382 0.01044736726344961 0.08089928633158018 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1'] 21269 9170 ERDSQTQAIL True PC9_epitope_Rep3 1159.5833154413099 1159.5822099358602 40.213 2 -0.004787045654987 0.01044736726344961 0.08090678691746228 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 25355 9021 FEADPPGQV True H1975_Epitope_Rep3 958.4396113297399 958.4390649679301 39.694 1 -0.004789431623609798 0.01044736726344961 0.080910156815463 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 130891 17998 VTDDLVCLVY True H1975_Epitope_Rep1 1138.55801221026 1138.55747496793 74.99 1 -0.004794623315777718 0.01044736726344961 0.08091748983432748 ['ENSG00000143742|ENST00000304786|SRP9'] 9030 12744 AVHDSFVAV True PC9_epitope_Rep3 943.4763311916299 943.4752299358599 54.04 2 -0.004799233290304438 0.01044736726344961 0.08092400162818418 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 53075 5032 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 24.445 2 -0.00480292982535257 0.01044736726344961 0.0809292234360237 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 120317 6545 VEDYSQNVA True H1975_Epitope_Rep3 1023.4509042894298 1023.4498099358599 30.143 2 -0.004803352210371801 0.01044736726344961 0.08092982012282984 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6'] 3418 12420 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5857749679299 52.807 1 -0.004814111847898641 0.01044736726344961 0.08094502097006945 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 102974 9434 SPFENTENA True PC9_epitope_Rep5 1007.41960416115 1007.41850993586 41.243 2 -0.00481886879381134 0.01044736726344961 0.08095174211223456 ['nc|ENSG00000110075|Q5H9R7-5|PPP6R3', 'ENST00000526574.1_1_11:68334490-68338573:+|nuORF', 'nc|ENSG00000110075|Q5H9R7-3|PPP6R3', 'nc|ENSG00000110075|Q5H9R7-4|PPP6R3', 'nc|ENSG00000110075|Q5H9R7-6|PPP6R3', 'nc|ENSG00000110075|Q5H9R7-2|PPP6R3', 'ENSG00000110075|ENST00000393800|PPP6R3'] 95501 8461 RWPKKSAEF True PC9_epitope_Rep5 1147.61382772395 1147.61218490379 37.488 3 -0.004823127813099861 0.01044736726344961 0.08095776008829236 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 41440 16380 HYILHNSFF True PC9_epitope_Rep4 1176.5716285587998 1176.56998490379 70.967 3 -0.0048389003736349825 0.01044736726344961 0.08098004961114882 ['ENSG00000163659|ENST00000295924|TIPARP'] 31445 13153 GEALDALRPW True H1975_Epitope_Rep3 1126.5771078620598 1126.5760099358602 55.841 2 -0.004852796682967151 0.010468440730151749 0.08099969151238776 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 2728 11613 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 49.736 1 -0.004857690822991945 0.010468440730151749 0.08100661005426796 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 114247 15799 TPMSVLQQA True PC9_epitope_Rep4 973.49026700361 973.48916993586 68.696 2 -0.004865380277275321 0.010468440730151749 0.08101748106571277 ['ENSG00000167978|ENST00000301740|SRRM2'] 36519 5946 GVGPVPARA True PC9_epitope_Rep3 822.47118624154 822.47008993586 27.929 2 -0.004872889006807782 0.010468440730151749 0.08102809764664157 ['ENSG00000129636|ENST00000320640|ITFG1'] 112801 21905 TLIEDILGV True PC9_epitope_Rep6 971.5539128059899 971.5533649679301 97.16 1 -0.004898477204103388 0.010489279824079165 0.08106428470119864 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 49287 7870 KEQVPGFTP True H1975_Epitope_Rep1 1001.5181960036098 1001.51708993586 35.222 2 -0.004915698071204256 0.010489279824079165 0.08108864551800911 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 138649 20590 YIGPVLVSV True PC9_epitope_Rep4 945.55351888317 945.55297496793 87.352 1 -0.004948275515864192 0.010489279824079165 0.08113474512658168 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 134609 17697 VYSLQQFGF True NCI_RA007_Epitope_Rep4 1087.53384606775 1087.53274993586 76.576 2 -0.004965340372034013 0.010489279824079165 0.08115890116811263 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 132192 16845 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.49037496793 69.619 1 -0.00496832984720697 0.010489279824079165 0.08116313346195483 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 2396 10222 AEQEFLANA True H1975_Epitope_Rep3 991.4610750503099 991.45996993586 44.366 2 -0.00499126359532994 0.010509421102389904 0.08119560706774387 ['ENSG00000007520|ENST00000007390|TSR3'] 92904 12397 RPGEITGYMA True PC9_epitope_Rep5 1093.52262976105 1093.5215299358601 52.682 2 -0.005018620308257726 0.010509421102389904 0.0812343563905723 ['ENSG00000179820|ENST00000391770|MYADM'] 92407 17882 RLQELFAV True PC9_epitope_Rep1 974.5549158654998 974.55380993586 73.576 2 -0.005024868365502207 0.010509421102389904 0.08124320840059658 ['ENST00000340291.6_1_9:35812160-35812229:-|nuORF'] 8919 12696 AVFPSIVGRPR True PC9_epitope_Rep2 1197.69822605425 1197.6971299358602 54.141 2 -0.005027295532577193 0.010509421102389904 0.08124664731629244 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 103900 11110 SQAEKVYIM True PC9_epitope_Rep2 1067.5321318155898 1067.53102993586 48.059 2 -0.00507620918236511 0.010509421102389904 0.08131597387281618 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000515766.1_1_4:1332171-1332954:+|nuORF'] 75288 21888 NIIPYITNV True PC9_epitope_Rep1 1045.58079626017 1045.5796899358602 89.006 2 -0.005092121390439868 0.010509421102389904 0.08133853633326997 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 47253 14401 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 60.393 2 -0.0051092708383864635 0.010509421102389904 0.08136285844212221 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 114756 6231 TQKSLSLSPG True NCI_RA007_Epitope_Rep1 1016.5502244078799 1016.5496749679301 28.27 1 -0.005110009314898104 0.010509421102389904 0.08136390590636018 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 103684 6599 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48159496793 30.186 1 -0.0051119985159879255 0.010529555296652084 0.08136672746479703 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 76298 11737 NPNQYNYIA True PC9_epitope_Rep6 1095.49852318819 1095.49742993586 56.301 2 -0.005148880410502825 0.010529555296652084 0.08141905560994757 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 1467 6183 AEEHAPSIV True H1975_Epitope_Rep2 951.4661604307499 951.46506993586 28.753 2 -0.005155671873553351 0.010529555296652084 0.0814286941443946 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000555787.1_1_14:90734518-90735894:+|nuORF'] 32217 8694 GEYGFQNA True H1975_Epitope_Rep3 884.36644638948 884.36534993586 38.441 2 -0.005157937726057415 0.010529555296652084 0.08143191006509541 ['CON__P02769'] 64813 5191 LQDAEIAR True PC9_epitope_Rep2 914.4821448480599 914.48104993586 25.355 2 -0.005177955142040966 0.010529555296652084 0.08146032494048035 ['ENSG00000197956|ENST00000368719|S100A6'] 132840 22239 VVLGNLEITYV True PC9_epitope_Rep2 1218.6859896047001 1218.6848899358602 91.02 2 -0.005178419284536389 0.010529555296652084 0.08146098388361295 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'nc|ENSG00000146648|P00533-2|EGFR', 'nc|ENSG00000146648|P00533-4|EGFR', 'nc|ENSG00000146648|P00533-3|EGFR', 'EGFR|p.S752Pfs*3|1|0.48|ENSG00000146648|chr7:55174791-55174813|TCTCCGAAAGCCAACAAGGAAAT/-|frameshift_variant', 'EGFR|p.T751Nfs*15|1|0.5|ENSG00000146648|chr7:55174789-55174789|C/-|frameshift_variant', 'ENSG00000146648|ENST00000275493|EGFR'] 52552 5881 KLFVGGLK True NCI_RA007_Epitope_Rep3 860.5483739330798 860.54726993586 30.111 2 -0.005189063436613362 0.010529555296652084 0.08147609649785278 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 31783 14427 GEIDYEAIV True H1975_Epitope_Rep3 1007.48114178855 1007.48057496793 60.848 1 -0.005197290072593082 0.010529555296652084 0.08148777817054137 ['ENSG00000100519|ENST00000445930|PSMC6'] 25656 7573 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.42114993586 34.081 2 -0.005220680773389289 0.010546205563123435 0.08152099948666303 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 44645 5802 ILSGVVTK True NCI_RA007_Epitope_Rep5 815.51165407119 815.51054993586 29.004 2 -0.005221376136514387 0.010546205563123435 0.08152198725353252 ['ENSG00000142534|ENST00000270625|RPS11'] 31618 4394 GEFEKKYVA True NCI_RA007_Epitope_Rep3 1069.5444107514497 1069.5433099358602 24.058 2 -0.005254667812097666 0.010546205563123435 0.08156928888161456 ['ENSG00000132341|ENST00000543796|RAN'] 77656 22698 NTIDILTAI True PC9_epitope_Rep1 972.54916177872 972.54861496793 92.112 1 -0.005261327481636884 0.010546205563123435 0.08157875360368243 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 106509 18387 STLPDVTEV True PC9_epitope_Rep1 959.48114178855 959.4805949679301 75.516 1 -0.005287006379653099 0.010546205563123435 0.08161525625774463 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 64418 16813 LPNHLAQAL True PC9_epitope_Rep3 975.55016483823 975.54906993586 69.821 2 -0.005300594674042132 0.010546205563123435 0.081634577087031 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.V841Cfs*5|1|0.1|ENSG00000155897|chr8:130836431-130836431|C/-|frameshift_variant'] 6422 6087 APRQPGLMA True PC9_epitope_Rep6 939.4960210903898 939.49492993586 31.806 2 -0.00531327149028315 0.010546205563123435 0.08165260504024624 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 137228 15904 YAYTGVLQL True H1975_Epitope_Rep1 1026.53859709502 1026.53750993586 66.485 2 -0.005326216003084983 0.010546205563123435 0.08167101680819014 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 48553 14377 KALSIFNEL True NCI_RA007_Epitope_Rep4 1033.58079626017 1033.5796899358602 62.609 2 -0.005351410148980388 0.010546205563123435 0.08170686100904001 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 111167 8783 THGPPVQL True PC9_epitope_Rep2 847.45520182423 847.45410993586 39.137 2 -0.005370121882215963 0.010546205563123435 0.08173349028099813 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 140050 12020 YQGVNLYVK True PC9_epitope_Rep4 1082.5760452328998 1082.57494993586 54.035 2 -0.00537415507310206 0.010546205563123435 0.08173923090793053 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENST00000490798.5_1_20:43550276-43564067:+|nuORF', 'ENST00000476056.5_1_20:43550276-43561823:+|nuORF'] 8881 14441 AVFPSIVG True H1975_Epitope_Rep1 788.4432401582 788.44269496793 60.744 1 -0.005375612133531986 0.010546205563123435 0.08174130488459576 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 71770 4617 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 22.861 2 -0.005382918461076102 0.010546205563123435 0.08175170529761212 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 127297 7159 VMDDGTNEY True H1975_Epitope_Rep2 1042.39134080798 1042.39077496793 32.471 1 -0.005409814468085183 0.010546205563123435 0.08178999988496358 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 31658 9034 GEFRQGLISA True NCI_RA007_Epitope_Rep4 1076.56145779792 1076.56036993586 41.582 2 -0.005441127165739071 0.010546205563123435 0.0818346001106982 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 428 19784 AALNTIVTV True PC9_epitope_Rep5 900.5280324113199 900.52692993586 81.145 2 -0.005510165198485853 0.010546205563123435 0.0819329995856498 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 13681 5786 DPRSQAAL True PC9_epitope_Rep5 856.4402800360799 856.43918993586 27.248 2 -0.005536528249897432 0.010546205563123435 0.08197059834756622 ['ENSG00000205502|ENST00000380392|C2CD4B', 'ENSG00000198535|ENST00000355522|C2CD4A'] 96543 21817 SADTTILFV True PC9_epitope_Rep5 965.50696261357 965.50586993586 88.951 2 -0.0055435981286191555 0.010546205563123435 0.08198068357401941 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 119617 6935 VATVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 33.36 2 -0.005546107472192578 0.010546205563123435 0.0819842633946906 ['CON__P00761'] 25414 8295 FEDESPPAP True H1975_Epitope_Rep2 987.4185415319898 987.4179949679301 36.858 1 -0.005556665804074801 0.010546205563123435 0.08199932717252559 ['ENSG00000105464|ENST00000263269|GRIN2D'] 71649 11135 MDYLVNNTP True NCI_RA007_Epitope_Rep3 1065.48009624273 1065.47898993586 50.902 2 -0.005572139486830677 0.010546205563123435 0.08202140756955621 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 111165 9739 THGPPVQL True PC9_epitope_Rep1 847.45520182423 847.45410993586 42.321 2 -0.005592397092409713 0.010546205563123435 0.08205032127014858 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 140181 14101 YQTEIGQTL True PC9_epitope_Rep6 1051.51858992643 1051.51807496793 66.112 1 -0.005608855182526711 0.010546205563123435 0.08207381760858114 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 27645 20384 FPFAPPAAA True PC9_epitope_Rep1 887.4541391950698 887.45304993586 83.23 2 -0.005662368649562709 0.0105623751070511 0.08215025119929917 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 117754 9430 TVVKAISGV True PC9_epitope_Rep4 872.53311779176 872.53202993586 43.883 2 -0.005691095280880077 0.0105623751070511 0.0821913038648111 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B', 'EIF2S3|p.H65Y|1|0.17|ENSG00000130741|chrX:24057480-24057480|C/T|missense_variant'] 132872 22852 VVLPIVITL True PC9_epitope_Rep4 965.65250464845 965.65140993586 96.122 2 -0.005695219633380609 0.0105623751070511 0.08219719917256695 ['ENST00000432401.5_1_3:10067730-10067880:-|nuORF'] 17502 4889 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 26.347 3 -0.005703606158028815 0.0105623751070511 0.08220918777466522 ['ENSG00000162378|ENST00000294353|ZYG11B'] 46171 18021 ISLPKGVVEV True PC9_epitope_Rep2 1039.62774645259 1039.62664993586 74.623 2 -0.005722903536606203 0.0105623751070511 0.08223677856092157 ['ENSG00000149257|ENST00000358171|SERPINH1'] 115870 9428 TSEIALLQSR True H1975_Epitope_Rep1 1116.6138872935999 1116.61278993586 41.177 2 -0.005752727374065106 0.0105623751070511 0.08227943355300894 ['ENSG00000163902|ENST00000296255|RPN1'] 115679 17420 TSAESFVNV True PC9_epitope_Rep1 952.45017601344 952.44962496793 71.802 1 -0.005780410435015364 0.0105623751070511 0.08231904174314203 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 95771 17790 RYIDRIHIF True PC9_epitope_Rep1 1231.68257599011 1231.68094490379 73.225 3 -0.0057953872162360325 0.0105623751070511 0.08234047614731742 ['ENSG00000174231|ENST00000304992|PRPF8'] 115148 20535 TRDFANFVL True PC9_epitope_Rep1 1081.55564414149 1081.5545499358602 83.801 2 -0.005804340647766265 0.0105623751070511 0.08235329210006727 ['ENST00000474983.5_1_6:10529144-10530083:+|nuORF', 'ENSG00000111846|ENST00000495262|GCNT2'] 14415 7968 DTDPSIYR True H1975_Epitope_Rep3 965.4454249861699 965.44432993586 35.62 2 -0.00580899816124181 0.0105623751070511 0.08235995946814527 ['nc|ENSG00000196364|A6NIE9|PRSS29P'] 7839 20176 [Acetylation]-ASVSELAC[Carbamidomethyl]IY True H1975_Epitope_Rep3 1153.53252633414 1153.5314299358602 84.397 2 -0.005809969811182823 0.0105623751070511 0.08236135046529496 ['nc|ENSG00000137818|P05386-2|RPLP1', 'ENSG00000137818|ENST00000260379|RPLP1', 'ENST00000487304.6_1_15:69745218-69746066:+|nuORF'] 100410 15669 SLADAINTEF True NCI_RA007_Epitope_Rep5 1079.51350454599 1079.5124099358602 66.987 2 -0.005828502797238705 0.0105623751070511 0.08238788537377642 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 77997 21019 NVPEGLLATV True PC9_epitope_Rep3 1011.56006081559 1011.5594749679301 86.127 1 -0.005841007664428571 0.0105623751070511 0.08240579308317411 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 8950 12474 AVGAAAFL True H1975_Epitope_Rep2 718.40137534622 718.40082496793 53.07 1 -0.005859069297948573 0.0105623751070511 0.0824316636165221 ['ENSG00000179921|ENST00000519574|GPBAR1'] 96644 10341 SAIGLADPP True NCI_RA007_Epitope_Rep5 839.4388830537499 839.43778993586 46.405 2 -0.005860480082153004 0.0105623751070511 0.08243368460863329 ['ENSG00000186838|ENST00000335426|SELENOV'] 61271 22564 LIPEYLNFI True PC9_epitope_Rep4 1120.61684741572 1120.61574993586 95.032 2 -0.005880003642941118 0.0105623751070511 0.08246165656926766 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 32588 13643 GGHGPSFPL True PC9_epitope_Rep1 867.42390169595 867.42280993586 57.334 2 -0.005880663311937974 0.0105623751070511 0.08246260182136511 ['ENSG00000079246|ENST00000392132|XRCC5'] 57531 9617 LEDPSQLPP True H1975_Epitope_Rep2 994.49712620586 994.49602993586 41.969 2 -0.005931346163835411 0.0105623751070511 0.0825352507769999 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 21595 16852 ERQRWLVAL True PC9_epitope_Rep2 1169.6669259259697 1169.66527490379 70.07 3 -0.005948348399853327 0.0105623751070511 0.08255963269060324 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 57423 14403 LEATINELV True H1975_Epitope_Rep1 1000.5440763982799 1000.54296993586 60.597 2 -0.005958454065929753 0.0105623751070511 0.08257412722073497 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 78703 5602 PAAAAAAAAAA True PC9_epitope_Rep6 825.4344663796498 825.43336993586 29.61 2 -0.005986041243290762 0.0105623751070511 0.08261370524818537 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 121850 15501 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 64.899 2 -0.005990677827844675 0.0105623751070511 0.0826203585481649 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 55398 12266 LAESNDVAI True PC9_epitope_Rep6 930.4658260775799 930.46472993586 58.561 2 -0.006001061765963202 0.0105623751070511 0.08263526052599741 ['ENST00000425050.5_1_10:109631494-109803030:-|nuORF'] 110964 20160 THALEWPSL True PC9_epitope_Rep3 1052.52909504048 1052.5279899358602 82.799 2 -0.006011625790092177 0.0105623751070511 0.08265042303361997 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 123725 4239 VGRGARLQTAL True NCI_RA007_Epitope_Rep4 1140.6727395823998 1140.67108490379 22.622 3 -0.0060605109244594455 0.0105623751070511 0.08272061513121577 ['ENSG00000137877|ENST00000320955|SPTBN5'] 64664 19416 LPVDVVVNA True PC9_epitope_Rep2 924.5280324113199 924.52692993586 80.062 2 -0.006070297822385267 0.010581313663505443 0.08273467314496108 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant'] 47215 14300 IVAPGKGILAA True PC9_epitope_Rep5 1008.6331661861998 1008.63206993586 60.007 2 -0.006077661147877792 0.010581313663505443 0.08274525110343565 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 42602 6659 IEGKDVFREA True NCI_RA007_Epitope_Rep4 1162.59823722946 1162.5965849037902 32.236 3 -0.006082003698425575 0.010581313663505443 0.08275148997655395 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 109804 5460 TEEDTPLKP True H1975_Epitope_Rep2 1028.5026055091198 1028.5015099358602 26.028 2 -0.006084588261909743 0.010581313663505443 0.08275520334674111 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4'] 24604 23478 FAIPGSIFL True PC9_epitope_Rep2 963.5429541994699 963.5424049679301 95.779 1 -0.006108035196317578 0.010581313663505443 0.08278889648045168 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 17842 10709 EHTVETLVV True H1975_Epitope_Rep2 1025.53932537101 1025.53822993586 46.216 2 -0.006110027193595679 0.010581313663505443 0.08279175944963012 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17'] 35039 12922 GQVGGEINV True PC9_epitope_Rep5 871.43994568291 871.43884993586 54.715 2 -0.006110847923761097 0.010581313663505443 0.08279293905394955 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 44643 6000 ILSGVVTK True H1975_Epitope_Rep3 815.51165407119 815.51054993586 28.092 2 -0.006111532294629869 0.010581313663505443 0.08279392268395429 ['ENSG00000142534|ENST00000270625|RPS11'] 106681 15398 STTNGGILTV True PC9_epitope_Rep4 961.50802524273 961.50692993586 67.161 2 -0.006139412524675571 0.010581313663505443 0.08283400179799892 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 45888 5420 ISDSEGFK True PC9_epitope_Rep5 881.4130622287299 881.41196993586 25.86 2 -0.006141824450099981 0.010581313663505443 0.08283746974187058 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 9001 13838 AVGPIVQL True H1975_Epitope_Rep2 795.48543932335 795.48489496793 58.374 1 -0.006184806871496654 0.010581313663505443 0.08289928967894142 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.D74Y|1|0.21|ENSG00000112531|chr6:163455356-163455356|G/T|missense_variant'] 116407 5743 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 27.482 2 -0.0061859911413515226 0.010581313663505443 0.08290099346211095 ['ENSG00000065183|ENST00000349139|WDR3'] 133447 14866 VVYGGGAAEI True PC9_epitope_Rep1 934.4759968384599 934.47544496793 62.001 1 -0.006195521603397752 0.010581313663505443 0.08291470569442419 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 1028 5678 AEAELLQQQK True H1975_Epitope_Rep3 1156.60880191316 1156.6077099358602 26.869 2 -0.006229324919416676 0.010603033828726977 0.08296335504895826 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 93102 7442 RPNPPPVSV True PC9_epitope_Rep4 961.53451477409 961.53340993586 35.976 2 -0.0062611304378203045 0.010622654346728705 0.08300914891450902 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 127693 8753 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 43.559 2 -0.006272251567889732 0.010622654346728705 0.08302516572741778 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 24903 16840 FAYGYIEDL True H1975_Epitope_Rep1 1089.50187723313 1089.50137496793 70.185 1 -0.00628705865613101 0.010622654346728705 0.08304649473962734 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 3528 14627 AGLQFPVGR True PC9_epitope_Rep3 943.5239500903898 943.52284993586 61.394 2 -0.006290510006963041 0.010622654346728705 0.08305146686668723 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 93208 5637 RPPPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 26.682 2 -0.006299673922349447 0.010622654346728705 0.08306466979087496 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 117187 11161 TVLERVEGA True PC9_epitope_Rep5 972.5240096600398 972.52290993586 47.917 2 -0.0063033519538988995 0.010622654346728705 0.08306996936659578 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 6414 6515 APRQPGLMA True PC9_epitope_Rep4 939.4960210903898 939.49492993586 32.183 2 -0.006337669240370355 0.010622654346728705 0.08311942853943768 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 27861 16524 FQDPSVTQL True PC9_epitope_Rep6 1033.50802524273 1033.5069299358602 75.997 2 -0.0063564246445360385 0.010622654346728705 0.08314646884050446 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 97762 8158 SEITDTVAA True H1975_Epitope_Rep3 905.43419159613 905.43308993586 36.359 2 -0.006377515802284588 0.010622654346728705 0.08317688462383632 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 40133 8651 HPYPPGPGV True PC9_epitope_Rep3 919.4552018242299 919.45410993586 38.228 2 -0.006384334281177843 0.010622654346728705 0.0831867194246231 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 38092 4299 HAVQHPVL True NCI_RA007_Epitope_Rep4 899.49773534255 899.49662993586 22.877 2 -0.0064111058842244075 0.010643901154369487 0.08322534261027771 ['nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 80382 7123 PGHLQEGFG True PC9_epitope_Rep4 940.4402800360799 940.43918993586 34.671 2 -0.00641821806994897 0.010643901154369487 0.08323560558534727 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 93492 12382 RQKFFEDIL True NCI_RA007_Epitope_Rep4 1194.6397081186199 1194.6386099358601 54.624 2 -0.0064423669498000075 0.010643901154369487 0.08327045986961526 ['nc|ENSG00000244274|Q9BQY9-4|DBNDD2', 'nc|ENSG00000244274|Q9BQY9-3|DBNDD2', 'ENSG00000244274|ENST00000372710|DBNDD2', 'nc|ENSG00000244274|Q9BQY9|DBNDD2'] 57534 9637 LEDPSQLPP True H1975_Epitope_Rep3 994.49712620586 994.49602993586 42.086 2 -0.006462935149444958 0.010659063493804145 0.08330015482911164 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 24570 20783 FAHPDLFVSI True PC9_epitope_Rep2 1144.59169529704 1144.5905899358602 85.385 2 -0.006466033102728271 0.010659063493804145 0.08330462813580865 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000533825.1_1_1:52237763-52247292:+|nuORF'] 73692 21566 MYPYIFHVL True PC9_epitope_Rep2 1181.59433814933 1181.59324993586 88.425 2 -0.006512182735290237 0.010659063493804145 0.0833712876583464 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 63027 19604 LLPVRLPLA True PC9_epitope_Rep4 990.6589870112199 990.65788993586 83.531 2 -0.006515686896172508 0.010659063493804145 0.08337635079037249 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 140110 9380 YQNQEIHNL True PC9_epitope_Rep3 1157.5465360097699 1157.54542993586 41.019 2 -0.00652772194250037 0.010659063493804145 0.08339374189570954 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 122343 12046 VGDEDFVHL True NCI_RA007_Epitope_Rep5 1029.47672511445 1029.47562993586 52.994 2 -0.006529880506833687 0.010659063493804145 0.08339686139427148 ['ENSG00000160213|ENST00000291568|CSTB'] 71442 18458 LYTGTVSSF True PC9_epitope_Rep1 973.47566248529 973.47511496793 75.79 1 -0.006534034952114296 0.010659063493804145 0.08340286553403119 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 8375 13516 ATLNIIHSV True PC9_epitope_Rep6 966.5498304850599 966.54872993586 63.712 2 -0.006537052391708045 0.010659063493804145 0.08340722664094469 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 93197 8538 RPPPIGAEV True PC9_epitope_Rep2 934.5236157372199 934.52250993586 38.203 2 -0.006595452010797481 0.010659063493804145 0.08349166559307539 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 142643 20814 YYPAGTQLF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 85.334 2 -0.006599773453558562 0.010659063493804145 0.0834979164551292 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1'] 104115 4430 SQEGRPVQV True PC9_epitope_Rep2 998.5145076054997 998.51340993586 22.397 2 -0.006639598740211126 0.010659063493804145 0.08355553941439774 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 2293 11964 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.5118349679301 51.098 1 -0.006646753001666778 0.010659063493804145 0.0835658940537796 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 87841 13928 QRGPPIIL True PC9_epitope_Rep2 892.5494365622399 892.54832993586 58.853 2 -0.006662887746612838 0.010659063493804145 0.08358925005335897 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 118163 22503 TYIQILESF True PC9_epitope_Rep4 1112.57537652656 1112.57426993586 94.788 2 -0.006665167875878451 0.010659063493804145 0.0835925510733176 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM', 'FANCM|p.D696Tfs*8|1|0.16|ENSG00000187790|chr14:45170670-45170670|G/-|frameshift_variant'] 107922 12182 SVVTGGVQSV True PC9_epitope_Rep1 931.49746055903 931.49691496793 51.716 1 -0.006667379313432652 0.010659063493804145 0.08359575274005727 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 47212 14501 IVAPGKGILAA True PC9_epitope_Rep3 1008.6331661861998 1008.63206993586 60.897 2 -0.006672250717671021 0.010659063493804145 0.0836028057701824 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 47304 11228 IVDSATALY True H1975_Epitope_Rep3 951.49131254943 951.4907649679301 48.29 1 -0.0066905034442615524 0.010659063493804145 0.08362923685687534 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 87550 13693 QQLEALTRV True PC9_epitope_Rep3 1056.5927579262 1056.5916699358602 57.745 2 -0.006728649095327475 0.010659063493804145 0.08368449452076726 ['ENSG00000176531|ENST00000292140|PHLDB3', 'ENST00000596902.1_1_19:44005819-44008744:-|nuORF', 'nc|ENSG00000176531|Q6NSJ2-2|PHLDB3'] 119643 21471 VAVAGLLTV True PC9_epitope_Rep1 841.52730413533 841.5267549679301 87.429 1 -0.00673472800222877 0.010659063493804145 0.08369330295240145 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 25356 8535 FEADPPGQVA True H1975_Epitope_Rep1 1029.47672511445 1029.4761749679299 37.759 1 -0.0067397235108896 0.010659063493804145 0.08370054204718119 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 140434 18606 YRGIFPVL True PC9_epitope_Rep6 963.5541875895099 963.55308993586 84.211 2 -0.006760908241268912 0.010659063493804145 0.08373124653330707 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 21676 5838 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 27.27 2 -0.006765182707936343 0.010659063493804145 0.08373744284301826 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 70167 22512 LVPSDFLSV True PC9_epitope_Rep5 975.52769805815 975.52660993586 91.596 2 -0.006781037531297273 0.010659063493804145 0.08376042917855332 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 49278 8657 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 38.258 2 -0.006799018232096665 0.010659063493804145 0.08378650337929991 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 38940 20314 HHHSSVIFIF True PC9_epitope_Rep1 1222.6247267608198 1222.62307490379 82.967 3 -0.006805339239216332 0.010659063493804145 0.08379567106366521 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 31888 12918 GELPAWAA True H1975_Epitope_Rep3 813.40210362221 813.4015549679301 54.918 1 -0.006844010584302471 0.010659063493804145 0.08385177461483401 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 11937 18337 DHMRFISEL True PC9_epitope_Rep5 1146.54917886206 1146.54754490379 75.548 3 -0.00684863921419974 0.010659063493804145 0.08385849163112995 ['ENSG00000273749|ENST00000617928|CYFIP1'] 33454 12777 GLAPPQHLIRV True PC9_epitope_Rep4 1199.71387611839 1199.71222490379 57.009 3 -0.006858597139233486 0.010659063493804145 0.08387294383856857 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant'] 52510 11883 KLAPPLVTL True NCI_RA007_Epitope_Rep3 950.6164534929001 950.61534993586 53.868 2 -0.00686482276850585 0.010659063493804145 0.08388198021900058 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 41753 6170 IAPALVSK True NCI_RA007_Epitope_Rep2 797.5010893874901 797.49998993586 28.607 2 -0.006872121893712298 0.010676312616463882 0.08389257569410714 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 17448 4942 EHEARNCMNR True H1975_Epitope_Rep3 1258.52952312998 1258.52788490379 24.137 3 -0.006883725604280026 0.010676312616463882 0.08390942182363476 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF', 'ENSG00000204859|ENST00000377674|ZBTB48'] 119646 20547 VAVAGLLTV True PC9_epitope_Rep4 841.52730413533 841.5267549679301 87.185 1 -0.006898316313592475 0.010676312616463882 0.08393060806707828 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 31909 12094 GEMEPPALP True H1975_Epitope_Rep1 939.4371688015898 939.43661496793 51.533 1 -0.006901258201831504 0.010676312616463882 0.08393488028554556 ['ENSG00000100726|ENST00000262319|TELO2'] 33410 10426 GLAEAVLEA True H1975_Epitope_Rep3 871.4650978015899 871.46454496793 45.163 1 -0.0069167788201140714 0.010676312616463882 0.0839574220893335 ['nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP'] 90794 3536 RESKVVVPP True NCI_RA007_Epitope_Rep5 1009.5920296502098 1009.59092993586 19.474 2 -0.006916915223791684 0.010676312616463882 0.08395762021928387 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 33784 22449 GLLEELVTV True PC9_epitope_Rep4 971.5539128059899 971.55280993586 94.582 2 -0.006938722539658811 0.010676312616463882 0.08398930046160942 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.W563L|1|0.3|ENSG00000204839|chr8:143568218-143568218|C/A|missense_variant', 'ENST00000533210.5_1_8:144649355-144650416:-|nuORF'] 55105 8274 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 36.767 2 -0.0069947144984831245 0.010676312616463882 0.08407068324322185 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 48124 17103 IYPDSFTVL True NCI_RA007_Epitope_Rep5 1053.53826274185 1053.5371699358602 72.556 2 -0.00699909999049657 0.010676312616463882 0.08407705994830593 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 111163 9542 THGPPVQL True PC9_epitope_Rep1 847.45520182423 847.45410993586 41.561 2 -0.007012604593636562 0.010676312616463882 0.08409669854884033 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 70476 17010 LVVDWDHHL True PC9_epitope_Rep1 1132.56654317836 1132.56490490379 70.251 3 -0.007013659496259352 0.010676312616463882 0.08409823275012794 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 1836 11128 AEIDAITAP True H1975_Epitope_Rep2 899.46001242115 899.45890993586 47.839 2 -0.00702201722269697 0.010676312616463882 0.08411038858512483 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'FNBP4|p.Q159L|1|0.48|ENSG00000109920|chr11:47753077-47753077|T/A|missense_variant', 'ENST00000533707.1_1_11:47774435-47776097:-|nuORF'] 34569 4385 GPSSVEDIKAK True PC9_epitope_Rep5 1129.5979028762897 1129.5962549037902 21.936 3 -0.0070709509487233875 0.010676312616463882 0.0841815864984979 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 34060 21444 GLVPFLVSV True PC9_epitope_Rep6 929.5586042636099 929.55805496793 95.361 1 -0.007075272953127236 0.010676312616463882 0.08418787714160794 ['ENSG00000182481|ENST00000330459|KPNA2'] 103126 6233 SPHPPSEVTA True PC9_epitope_Rep1 1020.48762415132 1020.48652993586 28.788 2 -0.00707573783178485 0.010676312616463882 0.08418855378992987 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 43922 18199 IIDDTIFNL True NCI_RA007_Epitope_Rep3 1062.55972646242 1062.5586299358602 79.703 2 -0.007103909193420352 0.010676312616463882 0.0842295659220774 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 39691 7322 HLSERADWQY True H1975_Epitope_Rep2 1303.5945488313498 1303.59344993586 33.104 2 -0.007110820855599288 0.010676312616463882 0.08423963028678985 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 78620 9530 NYSSAVQKF True PC9_epitope_Rep2 1042.5083595959 1042.5072699358602 42.005 2 -0.007160096313347679 0.010676312616463882 0.08431140866265423 ['OPHN1|p.K700Rfs*7|1|0.44|ENSG00000079482|chrX:68063915-68063915|G/-|frameshift_variant', 'ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 132053 21431 VTTEESFYL True PC9_epitope_Rep1 1087.5073565363898 1087.50624993586 87.272 2 -0.00719469499879207 0.010676312616463882 0.08436183529688022 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3'] 134273 10752 VYNKVHITL True PC9_epitope_Rep2 1085.62332977849 1085.62222993586 46.676 2 -0.007206480296107607 0.010676312616463882 0.08437901723666727 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 71462 20214 LYVGKIPGF True PC9_epitope_Rep1 992.5695033004798 992.56840993586 82.582 2 -0.007230878152777232 0.010694952771263888 0.08441459557889845 ['ENST00000488620.5_1_9:116327559-116353744:+|nuORF'] 64888 11522 LQEDPPAGV True PC9_epitope_Rep1 924.4552613938798 924.45416993586 49.198 2 -0.007232025055209474 0.010694952771263888 0.08441626833559684 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 6388 7503 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 33.811 2 -0.007242672647541743 0.010694952771263888 0.08443179903756595 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 101864 12929 SLPKKLALL True PC9_epitope_Rep4 981.6586526580498 981.65754993586 57.616 2 -0.007246167379421595 0.010694952771263888 0.08443689696371207 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 119630 8758 VATVSLPR True PC9_epitope_Rep4 841.5021520166499 841.50104993586 41.195 2 -0.00724668256633856 0.010694952771263888 0.08443764851019485 ['CON__P00761'] 34823 19350 GQIEVVPEV True PC9_epitope_Rep5 968.5178616504398 968.51731496793 79.476 1 -0.0072578680248446955 0.010694952771263888 0.08445396692279479 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 31781 14518 GEIDYEAIV True H1975_Epitope_Rep2 1007.48114178855 1007.48057496793 61.002 1 -0.007265565841354833 0.010694952771263888 0.08446519861220168 ['ENSG00000100519|ENST00000445930|PSMC6'] 28173 7490 FRDQNPEQL True PC9_epitope_Rep6 1145.5465360097699 1145.54542993586 38.059 2 -0.007293821478466569 0.010694952771263888 0.08450643535180401 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 5844 15937 APFGGFKMS True PC9_epitope_Rep5 940.4476739156399 940.44656993586 66.292 2 -0.007307985355246156 0.010694952771263888 0.0845271120557344 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 52544 16954 KLFNGTFLKA True PC9_epitope_Rep5 1137.65462990677 1137.65299490379 70.231 3 -0.007309918721868747 0.010694952771263888 0.08452993471788865 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1'] 61185 21437 LILEPSLYTV True PC9_epitope_Rep4 1146.65362684726 1146.65252993586 90.636 2 -0.00731346298027003 0.010694952771263888 0.08453510942231449 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 26692 21514 FIVDPVSNL True PC9_epitope_Rep3 1002.53859709502 1002.53750993586 88.049 2 -0.007324574438530364 0.010694952771263888 0.08455133397251842 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 108152 18261 SYFRWRETL True PC9_epitope_Rep5 1256.6302060640796 1256.62855490379 75.255 3 -0.007326694687965329 0.010694952771263888 0.08455443015087022 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 73024 15286 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 63.807 2 -0.007327005845414242 0.010694952771263888 0.08455488453807083 ['PODXL|p.G363Efs*14|1|0.12|ENSG00000128567|chr7:131508964-131508964|C/-|frameshift_variant', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENSG00000128567|ENST00000378555|PODXL'] 89451 11748 QYESKVFYL True NCI_RA007_Epitope_Rep3 1175.5862755634298 1175.5851699358602 53.322 2 -0.00733603801355913 0.010706309935630775 0.08456807513089232 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 8282 22540 ATIFDLSEV True PC9_epitope_Rep5 993.5018772331299 993.50078993586 91.705 2 -0.007339858133390536 0.010706309935630775 0.08457365450673707 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 1218 8073 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.4608749679301 36.0 1 -0.007355478312968748 0.010706309935630775 0.08459647103720254 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 138614 15239 YIDSDCIGNPD True H1975_Epitope_Rep2 1210.48121844154 1210.48012993586 63.775 2 -0.007358082164120348 0.010706309935630775 0.0846002749560752 ['TPD52L2-PDZRN4|1|fusion', 'ENST00000548316.1_1_12:41903559-41967689:+|nuORF', 'nc|ENSG00000165966|Q6ZMN7-4|PDZRN4', 'nc|ENSG00000165966|Q6ZMN7-2|PDZRN4', 'TPD52L2-PDZRN4|2|fusion', 'ENSG00000165966|ENST00000402685|PDZRN4'] 139796 7721 YPIEHGIITN True NCI_RA007_Epitope_Rep3 1155.5924235730297 1155.5913299358601 37.493 2 -0.007365042548499582 0.010706309935630775 0.08461044388815997 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 89239 18402 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48561496793 76.113 1 -0.00737048980311671 0.010706309935630775 0.08461840282145645 ['ENSG00000167658|ENST00000309311|EEF2'] 49484 11681 KFDQLLAEEK True PC9_epitope_Rep1 1219.6448530687096 1219.6437499358601 49.808 2 -0.007370571328137634 0.010706309935630775 0.08461852194119536 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 74778 17034 NHDKLIPLL True PC9_epitope_Rep2 1061.62332977849 1061.62222993586 70.771 2 -0.007382364490643167 0.010706309935630775 0.08463575477321857 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 2719 11324 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.4801949679301 48.536 1 -0.0073830450900639 0.010706309935630775 0.08463674938407567 ['nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 109944 11256 TEGKALLYL True H1975_Epitope_Rep2 1006.5698972232999 1006.56880993586 48.341 2 -0.0073842685775666606 0.010706309935630775 0.08463853738005828 ['ENST00000349457.7_1_16:57609483-57609783:+|nuORF'] 114028 5887 TPASPPRVSA True PC9_epitope_Rep1 981.52434401321 981.52324993586 27.461 2 -0.007395650631398821 0.010706309935630775 0.08465517239731817 ['ENST00000513117.1_1_5:6633573-6668378:+|nuORF'] 26346 15425 FHSDPQHWL True PC9_epitope_Rep3 1165.53049202281 1165.52884490379 64.487 3 -0.007396898685799997 0.010706309935630775 0.08465699659468072 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 34838 18579 GQISEVVVV True PC9_epitope_Rep2 928.5229470308799 928.52184993586 76.817 2 -0.007401644352367968 0.010706309935630775 0.08466393328751196 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 111094 5125 THDQSISQKL True PC9_epitope_Rep5 1155.5884008217497 1155.58675490379 24.738 3 -0.007405774586897042 0.010706309935630775 0.08466997075817001 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 121847 16593 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 68.649 2 -0.0074204261828906895 0.010706309935630775 0.08469139070151423 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 114763 5444 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.5496749679301 28.425 1 -0.007421233335047363 0.010706309935630775 0.0846925708386199 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 32591 12941 GGHGPSFPL True PC9_epitope_Rep2 867.42390169595 867.42280993586 55.072 2 -0.007429559952250984 0.010706309935630775 0.0847047459083036 ['ENSG00000079246|ENST00000392132|XRCC5'] 136912 18443 YAFPKSITV True PC9_epitope_Rep1 1024.5593325395998 1024.55822993586 75.731 2 -0.007434813011878257 0.010706309935630775 0.08471242754115582 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 103258 10106 SPLKHFVTA True PC9_epitope_Rep5 998.5549158654999 998.55380993586 43.857 2 -0.0074499923253076375 0.010706309935630775 0.08473462744315385 ['ENSG00000116688|ENST00000235329|MFN2', 'ENST00000497302.1_1_1:12042112-12052340:+|nuORF'] 85303 7959 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.57184490379 35.562 3 -0.007450650671839477 0.010706309935630775 0.08473559038090253 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 87557 12966 QQLEPVTGQV True PC9_epitope_Rep4 1097.57168812845 1097.5705899358602 57.767 2 -0.007484619738531409 0.010706309935630775 0.08478528679670069 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 211 7589 AAFGGTFKKV True PC9_epitope_Rep2 1024.5705659296398 1024.56946993586 34.56 2 -0.007491540054974999 0.010706309935630775 0.08479541384461 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 55306 8425 LAEAALELREE True NCI_RA007_Epitope_Rep1 1242.6455813446998 1242.64448993586 36.773 2 -0.007494748195511582 0.010706309935630775 0.08480010888023985 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 44841 10515 INELKELQK True H1975_Epitope_Rep1 1113.63937376545 1113.63826993586 45.398 2 -0.007498270922507997 0.010706309935630775 0.08480526453109136 ['nc|ENSG00000152359|Q8NA72-2|POC5', 'nc|ENSG00000152359|Q8NA72-3|POC5', 'ENSG00000152359|ENST00000428202|POC5'] 5710 22185 APALLLIPAA True PC9_epitope_Rep3 948.60080342876 948.59970993586 90.62 2 -0.007515546168674745 0.010706309935630775 0.08483055095837345 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 55270 19260 LADPSAFVAA True PC9_epitope_Rep3 960.4916469025999 960.49054993586 79.305 2 -0.0075155896764686715 0.010706309935630775 0.08483061464953663 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 1321 7372 AEDSPAIGP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 33.334 1 -0.007540229930293035 0.010706309935630775 0.08486669136333683 ['ENSG00000012174|ENST00000379484|MBTPS2'] 89243 17602 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48561496793 75.723 1 -0.007572171583361444 0.010706309935630775 0.08491347552731347 ['ENSG00000167658|ENST00000309311|EEF2'] 130124 13454 VSDPVGVLY True H1975_Epitope_Rep3 947.49639792987 947.49530993586 57.024 2 -0.007580943043863663 0.010706309935630775 0.0849263262714942 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 23348 7296 EVRKEGVAV True PC9_epitope_Rep2 985.5556441414898 985.55454993586 33.449 2 -0.007593948070651128 0.010706309935630775 0.08494538215362143 ['ENST00000441302.6_1_3:39139332-39139530:-|nuORF'] 104792 18858 SQYGEIVNI True PC9_epitope_Rep4 1021.5080252427299 1021.5074749679301 80.623 1 -0.007595922826532023 0.010706309935630775 0.08494827598674545 ['ENSG00000134597|ENST00000305536|RBMX2'] 8814 13663 AVDTNGDII True PC9_epitope_Rep2 916.4501760134399 916.44906993586 57.846 2 -0.007601868138574909 0.010706309935630775 0.08495698877309418 ['nc|ENSG00000110171|O75382-4|TRIM3', 'nc|ENSG00000110171|O75382-3|TRIM3', 'nc|ENSG00000110171|O75382-2|TRIM3', 'ENSG00000110171|ENST00000345851|TRIM3', 'TRIM3|p.N605Kfs*15|1|0.24|ENSG00000110171|chr11:6450947-6450948|-/T|frameshift_variant'] 78202 13990 NYENKQYLF True PC9_epitope_Rep4 1217.57168812845 1217.5705899358602 61.718 2 -0.007606774753080907 0.010706309935630775 0.08496417986703832 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 95925 7731 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 36.438 3 -0.007638970284684683 0.010706309935630775 0.08501137674598677 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 138158 20459 YGLPVVVKL True PC9_epitope_Rep5 986.6164534929 986.6159049679301 83.734 1 -0.007655483114025245 0.010706309935630775 0.08503559130372214 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 90301 4573 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 22.711 3 -0.007668148693810794 0.010706309935630775 0.08505416773998029 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 26640 19775 FIPPDGNFRL True PC9_epitope_Rep3 1174.61349337078 1174.6123899358602 81.293 2 -0.0076788104985308315 0.010706309935630775 0.08506980763461054 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 106051 10228 STAAVFHAV True PC9_epitope_Rep2 901.4657665079299 901.46466993586 44.678 2 -0.007682524512428779 0.010706309935630775 0.08507525626255685 ['nc|ENSG00000090097|P57723-2|PCBP4', 'ENSG00000090097|ENST00000461554|PCBP4', 'ENST00000497390.5_1_3:51992079-51994784:-|nuORF', 'ENST00000492809.5_1_3:51992079-51994784:-|nuORF'] 44471 21530 ILLAEVPTM True PC9_epitope_Rep2 985.55180463101 985.55070993586 88.283 2 -0.007683156409872325 0.010706309935630775 0.08507618331110797 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF'] 115493 17199 TRPPLLAL True PC9_epitope_Rep2 879.5541875895099 879.55308993586 71.414 2 -0.007712056366029563 0.010706309935630775 0.08511859019074437 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 88535 17326 QTAPEEAFIKL True PC9_epitope_Rep6 1245.6605031328497 1245.6594099358601 79.257 2 -0.007726762985147063 0.010706309935630775 0.08514017632575654 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 97629 9169 SEFGKIYGP True NCI_RA007_Epitope_Rep3 996.4916469025998 996.49054993586 43.153 2 -0.007740474415574515 0.010706309935630775 0.08516030545079101 ['ENSG00000082781|ENST00000296181|ITGB5'] 4645 21009 ALADDDFLTV True PC9_epitope_Rep4 1078.5182555732601 1078.51714993586 88.972 2 -0.0077528133994039464 0.010706309935630775 0.08517842281174434 ['ENSG00000104738|ENST00000649973|MCM4'] 49035 7065 KEGDFNNLTA True NCI_RA007_Epitope_Rep3 1107.51965255559 1107.5185499358602 34.906 2 -0.007763873819534949 0.010706309935630775 0.0851946653200574 ['ENSG00000241945|ENST00000291576|PWP2'] 108399 10799 SYLKQLPHF True NCI_RA007_Epitope_Rep4 1131.6076797143498 1131.60604490379 48.385 3 -0.0077707885024710975 0.010706309935630775 0.08520482089203232 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 132591 14211 VVEVGHFWGY True H1975_Epitope_Rep2 1191.5712942056298 1191.57018993586 59.813 2 -0.007774710174880005 0.010727029926224305 0.08521058104423891 ['ENSG00000156414|ENST00000409874|TDRD9', 'nc|ENSG00000156414|Q8NDG6-2|TDRD9'] 48977 5713 KEFDGKSLVS True NCI_RA007_Epitope_Rep5 1108.5764391557198 1108.57534993586 28.662 2 -0.007795250389486807 0.010727029926224305 0.08524075529780485 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000517330.1_1_5:77337712-77337985:-|nuORF', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 65326 5904 LRDEHNYTL True PC9_epitope_Rep6 1159.56218607391 1159.56055490379 30.976 3 -0.007804854768940272 0.010727029926224305 0.08525486720720388 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 31754 6822 GEHIATEITA True H1975_Epitope_Rep2 1040.51383889916 1040.51274993586 31.159 2 -0.007818734065779908 0.010727029926224305 0.08527526344542645 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 90666 7723 REQEELLAPA True H1975_Epitope_Rep2 1154.59315184902 1154.5920499358601 34.658 2 -0.00782378250332399 0.010727029926224305 0.0852826832574839 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP'] 96377 7130 RYVPRASYF True NCI_RA007_Epitope_Rep3 1157.5981776598098 1157.5970899358601 35.166 2 -0.007831690944994868 0.01074845121604168 0.08529430746409693 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 129048 6118 VQNGKVIGV True PC9_epitope_Rep4 912.5392658013598 912.53816993586 30.544 2 -0.007837095120158365 0.01074845121604168 0.08530225146545482 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 92107 11320 RLAPAGIPA True PC9_epitope_Rep5 864.51813643396 864.51702993586 48.537 2 -0.007854038023445326 0.010769870630212551 0.08532716071529255 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 77285 16950 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 70.78 2 -0.007854124360904059 0.010769870630212551 0.08532728766158591 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 137470 7626 YEEAVKTLP True H1975_Epitope_Rep3 1048.54407639828 1048.5429699358601 34.316 2 -0.007865718453954585 0.010787746170678337 0.0853443363286641 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 39944 10733 HPIPDSSPL True PC9_epitope_Rep5 961.4868958753301 961.48578993586 46.277 2 -0.00786884191487631 0.010787746170678337 0.08534892969579687 ['ENSG00000105550|ENST00000593756|FGF21'] 48485 4336 KAFSDHSSL True NCI_RA007_Epitope_Rep4 990.4770594676199 990.47596993586 23.022 2 -0.007881564359883804 0.010787746170678337 0.08536764126764801 ['nc|ENSG00000130803|Q96PQ6-3|ZNF317', 'nc|ENSG00000130803|Q96PQ6-4|ZNF317', 'ENST00000591278.5_1_19:9268612-9272106:+|nuORF', 'ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317'] 112461 11202 TLDGSLHAV True PC9_epitope_Rep5 911.4712458111901 911.47014993586 48.077 2 -0.007889892969338314 0.010787746170678337 0.08537989226490673 ['ENSG00000178607|ENST00000433197|ERN1', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 130677 16210 VSTLPAITLK True PC9_epitope_Rep2 1041.64339651673 1041.6422899358602 67.599 2 -0.007896149390286529 0.010787746170678337 0.08538909603917422 ['ENSG00000117984|ENST00000236671|CTSD'] 4056 4783 AHISGATSV True PC9_epitope_Rep3 841.4293809992101 841.42828993586 23.494 2 -0.007948398470028472 0.010787746170678337 0.08546598841785669 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 134521 4100 VYQNHVQHL True NCI_RA007_Epitope_Rep4 1136.57269118796 1136.5710449037902 22.047 3 -0.007951884536969914 0.010787746170678337 0.08547112054241283 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 111653 20893 TIEDGIFEV True PC9_epitope_Rep4 1021.4967918526899 1021.49627496793 88.523 1 -0.007967169333002923 0.010787746170678337 0.08549362527829288 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 108638 8307 SYPRRFSTL True PC9_epitope_Rep4 1125.59309227937 1125.59143490379 39.41 3 -0.007982304792562452 0.010787746170678337 0.08551591452830022 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 15202 6029 EADHLQEEY True H1975_Epitope_Rep3 1132.46728262956 1132.46618993586 28.205 2 -0.007998019961297067 0.010787746170678337 0.08553906211199051 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 1620 16411 AEFLKVFLP True NCI_RA007_Epitope_Rep4 1062.6113681124598 1062.61026993586 71.128 2 -0.008001869736933051 0.010787746170678337 0.08554473333933321 ['ENSG00000176171|ENST00000368636|BNIP3'] 17500 7212 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.5352099358602 32.705 2 -0.008002365376007603 0.010787746170678337 0.08554546350161571 ['ENSG00000162378|ENST00000294353|ZYG11B'] 104173 14903 SQFPGAITL True NCI_RA007_Epitope_Rep4 932.4967322830399 932.49562993586 64.787 2 -0.008014014856417171 0.010787746170678337 0.08556262655553216 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 26038 17179 FGHPLLVSV True PC9_epitope_Rep4 967.5491022090699 967.54800993586 74.085 2 -0.00802574214132409 0.010787746170678337 0.08557990685327685 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF', 'ENST00000488848.1_1_X:47102801-47104466:+|nuORF'] 40088 9419 HPVLLTEA True PC9_epitope_Rep4 878.4861675993401 878.48561496793 43.841 1 -0.008026466933861606 0.010787746170678337 0.08558097493004768 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTR1B|p.L115I|1|0.36|ENSG00000115073|chr2:97658976-97658976|G/T|missense_variant', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 73803 16701 NAIGSASVVTV True PC9_epitope_Rep3 1016.55022440788 1016.54912993586 69.373 2 -0.008038003511961348 0.010787746170678337 0.08559797693902883 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 17647 13150 EHIVPNAEL True PC9_epitope_Rep5 1020.52400966004 1020.52290993586 55.586 2 -0.008040662773484482 0.010787746170678337 0.08560189638056923 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 141584 6964 YTQKSLSLSPG True NCI_RA007_Epitope_Rep3 1179.6135529404298 1179.61244993586 34.5 2 -0.008049293974928803 0.010809154960395606 0.08561461869529928 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1'] 118434 17337 TYPENWRAF True PC9_epitope_Rep2 1182.5458077337798 1182.54470993586 71.941 2 -0.008060700598070207 0.010809154960395606 0.08563143413796791 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 130916 6662 VTDEPLLK True H1975_Epitope_Rep2 913.5120479940099 913.51094993586 30.533 2 -0.008101593527799864 0.010830324909747292 0.08569173818229305 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 84160 5557 PYHPHPHVF True NCI_RA007_Epitope_Rep4 1129.54574816413 1129.5441149037902 27.975 3 -0.008108513888860738 0.010830324909747292 0.08570194666808813 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000557261.1_1_14:89816083-89817451:-|nuORF'] 142015 20454 YVLDDLIVA True PC9_epitope_Rep6 1019.5539128059899 1019.55280993586 91.392 2 -0.008121925077770771 0.010830324909747292 0.08572173262153043 ['ENSG00000180104|ENST00000512944|EXOC3'] 12008 4581 DHSDAGADELG True NCI_RA007_Epitope_Rep4 1085.42614609357 1085.4250499358602 24.025 2 -0.008129104699141528 0.010850305164832761 0.08573232635630457 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF'] 129334 11822 VQYNEPLKV True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 53.24 2 -0.008136390063581005 0.010850305164832761 0.0857430771238937 ['ENSG00000148843|ENST00000369797|PDCD11'] 28059 19335 FQSPPTPFL True PC9_epitope_Rep6 1032.5280324113198 1032.5269299358602 87.02 2 -0.008163039028121268 0.010850305164832761 0.08578241073838598 ['nc|ENSG00000175550|Q14919-2|DRAP1', 'ENSG00000175550|ENST00000312515|DRAP1', 'ENST00000530791.5_1_11:65687869-65688903:+|nuORF'] 119306 8266 VAMEAVAA True H1975_Epitope_Rep2 760.3789256494799 760.3783749679301 36.747 1 -0.008163765878106693 0.010850305164832761 0.08578348375191013 ['GLI2|p.V1154*|1|0.27|ENSG00000074047|chr2:120989372-120989372|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000074047|P10070-4|GLI2', 'nc|ENSG00000074047|P10070-3|GLI2', 'ENST00000452692.5_1_2:121728002-121748192:+|nuORF', 'ENST00000438299.5_1_2:121728002-121748192:+|nuORF', 'nc|ENSG00000074047|P10070-2|GLI2', 'nc|ENSG00000074047|P10070-1|GLI2'] 109916 7265 TEFQFRGG True NCI_RA007_Epitope_Rep3 940.4402800360797 940.43918993586 35.687 2 -0.008183101160250039 0.010850305164832761 0.0858120311984772 ['ENSG00000124614|ENST00000648437|RPS10', 'ENST00000408001.1_1_6:34712123-34712447:+|nuORF', 'ENST00000440748.1_1_7:37415149-37415623:+|nuORF', 'ENST00000468490.1_1_5:50571220-50571544:+|nuORF'] 113767 16825 TMLGKFYHF True PC9_epitope_Rep4 1142.55828699378 1142.5566449037901 72.691 3 -0.008183656534519574 0.010850305164832761 0.08581285128253312 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 7056 9908 AQQPTAVQV True PC9_epitope_Rep5 940.4977949121998 940.49668993586 43.083 2 -0.0082113665176024 0.010850305164832761 0.08585377624077202 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 105153 16006 SRFPEALRL True PC9_epitope_Rep5 1087.61382772395 1087.6127299358602 66.558 2 -0.008224205992381278 0.010850305164832761 0.08587274387170947 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 87450 8486 QPYYATRVN True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 37.477 2 -0.008238895651155544 0.010869565217391304 0.08589444862340484 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 85215 9141 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57797496793 40.112 1 -0.008243307622373667 0.010869565217391304 0.08590096835028763 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 54977 7045 KYQEVTNNL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 36.105 2 -0.008260965791852088 0.010869565217391304 0.0859270661780051 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 29361 7864 FVDKENLT True PC9_epitope_Rep5 964.48656152216 964.48546993586 35.192 2 -0.00828676855475443 0.010869565217391304 0.08596521198975877 ['ENSG00000171853|ENST00000324266|TRAPPC12', 'ENST00000482645.1_1_2:3383573-3392513:+|nuORF'] 108642 10710 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 46.186 3 -0.008326705011479488 0.010869565217391304 0.08602427759163714 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 43756 18258 IHIPINNII True PC9_epitope_Rep6 1045.6284151589302 1045.62730993586 82.871 2 -0.00833181216205079 0.010869565217391304 0.08603183321186414 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G', 'ENST00000461536.1_1_7:54823470-54826890:-|nuORF'] 118553 10868 TYQQVQQTL True PC9_epitope_Rep6 1107.55603806431 1107.5549499358601 52.664 2 -0.008346948994480874 0.010869565217391304 0.08605422987115138 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 6547 8058 APTPSTAAV True PC9_epitope_Rep5 813.4232329896099 813.42212993586 35.933 2 -0.008371219771104457 0.010869565217391304 0.08609015037612251 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 47984 18513 IYKFITERF True PC9_epitope_Rep3 1215.6651945904698 1215.66355490379 76.429 3 -0.008420967240064412 0.010869565217391304 0.08616381132205442 ['ENSG00000178919|ENST00000375123|FOXE1'] 108073 10429 SYANVQDGF True NCI_RA007_Epitope_Rep3 999.4297749220299 999.42866993586 48.09 2 -0.008434799213544555 0.010869565217391304 0.08618430069505996 ['ENSG00000152766|ENST00000371930|ANKRD22'] 34913 15608 GQMIFAQAL True NCI_RA007_Epitope_Rep5 977.5004377644899 977.49934993586 66.745 2 -0.008442124709192504 0.010869565217391304 0.08619515347090446 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 25565 7682 FEKIEEVSA True H1975_Epitope_Rep2 1050.5233409537 1050.5222499358601 34.501 2 -0.008455615307900607 0.010885959735064595 0.08621514257724085 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 33349 7114 GKSSVINTL True NCI_RA007_Epitope_Rep4 917.51819600361 917.51708993586 33.985 2 -0.008466564019893177 0.010885959735064595 0.0862313679121387 ['ENSG00000134697|ENST00000373062|GNL2', 'ENST00000469191.1_1_1:38041920-38047841:-|nuORF'] 21325 18456 ERFEIPIKV True PC9_epitope_Rep1 1129.6495445263297 1129.64788490379 75.783 3 -0.008511055775176884 0.010885959735064595 0.08629732561319663 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 41497 16473 HYMPPPYASL True PC9_epitope_Rep2 1174.5481162328997 1174.5470099358602 68.605 2 -0.008519088346088326 0.010885959735064595 0.08630923769493068 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 118910 10288 VADLVENSY True H1975_Epitope_Rep1 1008.4763907612801 1008.47528993586 44.517 2 -0.008527465559180403 0.010885959735064595 0.08632166218631497 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 12056 17852 DHTAPLLL True PC9_epitope_Rep1 878.48616759934 878.48506993586 73.462 2 -0.008530547267711656 0.010885959735064595 0.08632623309672396 ['ENSG00000188352|ENST00000338382|FOCAD'] 5822 17163 APELQGVEV True PC9_epitope_Rep5 940.4865615221598 940.48546993586 71.039 2 -0.008543097103933877 0.010885959735064595 0.086344849380156 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 35075 15636 GQVGHILEL True PC9_epitope_Rep4 964.5341804209199 964.53308993586 68.069 2 -0.008548297768602118 0.010885959735064595 0.08635256486961779 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF', 'ENST00000432615.5_1_7:158447451-158457424:-|nuORF'] 37800 14422 GYEPPVQESV True PC9_epitope_Rep5 1103.51350454599 1103.5124099358602 60.473 2 -0.008573147091954359 0.010885959735064595 0.08638943743369387 ['ENSG00000145425|ENST00000274065|RPS3A'] 9687 15812 AYGGAFYAF True NCI_RA007_Epitope_Rep4 965.42831837005 965.4277649679301 68.675 1 -0.008584439734509062 0.010885959735064595 0.08640619787839966 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'L3HYPDH|p.D184G|1|0.38|ENSG00000126790|chr14:59479309-59479309|T/C|missense_variant', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 26413 18317 FHYNGTDVSF True PC9_epitope_Rep5 1185.50908787189 1185.50798993586 75.471 2 -0.008592377294846276 0.010885959735064595 0.08641798019877205 ['ENSG00000176624|ENST00000406189|MEX3C'] 141565 17519 YTPEAFNWR True PC9_epitope_Rep2 1182.54580773378 1182.54470993586 72.648 2 -0.008613667421383983 0.010885959735064595 0.08644958869548919 ['DPP3-FKBP2|1|fusion', 'nc|ENSG00000254986|Q9NY33-4|DPP3', 'DPP3-FKBP2|2|fusion', 'ENSG00000254986|ENST00000531863|DPP3'] 92106 10305 RLAPAGIPA True PC9_epitope_Rep2 864.51813643396 864.51702993586 44.966 2 -0.008625850165148675 0.010885959735064595 0.08646767977115172 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 15952 18215 EDPGQAYVL True PC9_epitope_Rep5 990.4658260775799 990.46472993586 75.076 2 -0.008638467991832354 0.010885959735064595 0.08648641992879591 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13'] 29417 14394 FVDRGFYSV True PC9_epitope_Rep6 1088.52909504048 1088.5279899358602 67.263 2 -0.008647944379859121 0.010885959735064595 0.08650049638522374 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 39880 8130 HPDYNNEL True PC9_epitope_Rep3 1000.4250238947601 1000.42392993586 36.25 2 -0.008659758285049293 0.010885959735064595 0.08651804745345522 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 20537 6724 EPQYPVRSA True PC9_epitope_Rep5 1045.5192586327698 1045.5181699358602 30.834 2 -0.008661718004324463 0.010885959735064595 0.08652095912560297 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 16913 19006 EFNSTPAVF True PC9_epitope_Rep4 1010.4709114580198 1010.4703749679301 81.197 1 -0.008662071384989237 0.010885959735064595 0.08652148417221744 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 55431 19408 LAFEGPILL True H1975_Epitope_Rep2 971.5691689473098 971.5686249679301 80.553 1 -0.008693325368763204 0.010885959735064595 0.08656793023257836 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.I1609Mfs*13|1|0.25|ENSG00000188994|chr6:87258456-87258457|AA/-|frameshift_variant', 'ZNF292|p.L1719Ffs*6|1|0.39|ENSG00000188994|chr6:87258778-87258779|-/C|frameshift_variant', 'ZNF292|p.L434Tfs*10|1|0.31|ENSG00000188994|chr6:87254927-87254928|-/A|frameshift_variant', 'ZNF292|p.H563Afs*10|1|0.12|ENSG00000188994|chr6:87255315-87255316|-/GCCCATT|frameshift_variant'] 90741 3827 RERPPEEVAA True NCI_RA007_Epitope_Rep2 1152.58873517492 1152.5876299358601 19.521 2 -0.008744438083806908 0.010885959735064595 0.08664392834686913 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 53836 14711 KTFSEILNRV True PC9_epitope_Rep2 1205.67682190333 1205.67572993586 61.854 2 -0.008763435857464363 0.010885959735064595 0.08667218837557873 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 63045 19117 LLQDFFNGK True PC9_epitope_Rep2 1080.5603951687601 1080.55928993586 78.904 2 -0.008779379913948768 0.010885959735064595 0.0866959111997291 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 124958 10548 VHSTNVLL True PC9_epitope_Rep1 881.49706663621 881.49596993586 45.463 2 -0.008796489334678066 0.010885959735064595 0.08672137336050433 ['BACH1|p.P308Lfs*8|1|0.22|ENSG00000156273|chr21:29326746-29326746|C/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 133066 18660 VVPQQLLTV True PC9_epitope_Rep6 995.60153170475 995.60042993586 84.419 2 -0.008804208447606486 0.010906627032698023 0.0867328627441788 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 38068 11217 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.4495649679301 48.475 1 -0.008804775187767372 0.010906627032698023 0.08673370634400526 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 54427 13267 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64755490379 57.711 3 -0.008806434477437175 0.010906627032698023 0.08673617625283433 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 12027 17433 DHSIIETL True PC9_epitope_Rep3 926.47091145802 926.46980993586 72.23 2 -0.00882193593642107 0.010906627032698023 0.08675925324708769 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 117976 6480 TYDGNHDTF True PC9_epitope_Rep4 1068.4148531338801 1068.41374993586 32.042 2 -0.008836046839823718 0.010906627032698023 0.08678026412622561 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000599084.1_1_19:48892794-48894615:-|nuORF', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 142324 7818 YYEEQHPEL True NCI_RA007_Epitope_Rep5 1206.5193182024198 1206.51822993586 36.772 2 -0.008851356717450748 0.010927051007474103 0.08680306457102757 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 106439 5741 STIPPELVKQK True NCI_RA007_Epitope_Rep5 1238.72343774258 1238.7217949037902 28.77 3 -0.008857004654490066 0.010927051007474103 0.08681147697252069 ['ENSG00000058729|ENST00000283109|RIOK2'] 40104 12378 HPWETVTTAA True PC9_epitope_Rep3 1111.52982331647 1111.5287299358602 52.641 2 -0.008899363480016763 0.010927051007474103 0.08687458842051063 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 67849 20379 LTAPALALA True PC9_epitope_Rep1 839.5116540711899 839.51110496793 83.214 1 -0.008906760503546267 0.010927051007474103 0.08688561295291819 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 46895 16203 ITLPVLHSA True PC9_epitope_Rep4 949.55966689277 949.55856993586 70.27 2 -0.008908936416383845 0.010927051007474103 0.08688885613552673 ['ENST00000430145.3_1_19:49166463-49183997:+|nuORF', 'ENSG00000176920|ENST00000425340|FUT2'] 55789 6976 LANGQTKVL True PC9_epitope_Rep5 942.5498304850599 942.54872993586 31.801 2 -0.008965291029982078 0.010927051007474103 0.08697288389744663 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 25564 7560 FEKIEEVSA True H1975_Epitope_Rep2 1050.5233409537 1050.5222499358601 34.033 2 -0.008986458656944737 0.010944121630477522 0.0870044616968802 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 73602 22195 MVWEGLNVV True PC9_epitope_Rep3 1045.52665251233 1045.52554993586 90.659 2 -0.008988609501822821 0.010944121630477522 0.08700767080130083 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF'] 27733 13122 FPRPVTVEP True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 55.748 2 -0.00899017426579339 0.010944121630477522 0.08701000551679176 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 38326 9589 HEGPVWQV True H1975_Epitope_Rep3 950.46101548066 950.4604649679301 41.896 1 -0.008996461582120033 0.010944121630477522 0.08701938701820001 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 29494 21760 FVFPGELLL True H1975_Epitope_Rep2 1033.5848190114498 1033.58427496793 90.009 1 -0.009000051259090818 0.010944121630477522 0.08702474362742499 ['ENSG00000105281|ENST00000542575|SLC1A5'] 23845 21277 EYINFLENL True PC9_epitope_Rep6 1153.5655401188499 1153.56444993586 94.696 2 -0.009003377003192219 0.010944121630477522 0.0870297066096575 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 6305 7047 APRLQSEVA True PC9_epitope_Rep3 969.5243440132099 969.52324993586 32.116 2 -0.009005474447333413 0.010944121630477522 0.08703283671840017 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 17563 9686 EHGPNPIL True PC9_epitope_Rep1 875.45011644379 875.44900993586 42.113 2 -0.00901762974441862 0.010944121630477522 0.0870509782673284 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 132450 21119 VVDALWNEEAL True PC9_epitope_Rep2 1257.62411762413 1257.6230299358601 86.693 2 -0.009022977461967285 0.010944121630477522 0.08705896053113993 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 11725 12242 DHARTITVAL True PC9_epitope_Rep5 1095.60365696307 1095.60254993586 52.076 2 -0.009031323528445313 0.010944121630477522 0.08707141937249961 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 119312 22494 VAMLPGLAL True PC9_epitope_Rep2 883.5201105799099 883.51900993586 92.012 2 -0.009033792411743848 0.010944121630477522 0.0870751051282008 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 5212 18955 ALPDDLVEV True PC9_epitope_Rep6 969.5018772331299 969.50078993586 85.557 2 -0.009056109634876307 0.010944121630477522 0.08710842745164542 ['ENSG00000120756|ENST00000457734|PLS1'] 78067 23141 NVVEALIAL True PC9_epitope_Rep3 940.5593325395998 940.55822993586 94.279 2 -0.009066643325491439 0.010944121630477522 0.08712415884888387 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 108171 14658 SYGDILHVI True NCI_RA007_Epitope_Rep4 1015.53384606775 1015.53274993586 63.791 2 -0.009093175655308866 0.010944121630477522 0.08716379262831521 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 6402 7812 APRQPGLMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 34.873 2 -0.009100495499752925 0.010944121630477522 0.08717472932928062 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 118344 16857 TYMKDLYQL True PC9_epitope_Rep6 1173.5739966275698 1173.57288993586 77.358 2 -0.00910522568697305 0.010944121630477522 0.0871817973271623 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 54557 4552 KYISKPENL True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 24.779 2 -0.009113942957390509 0.010944121630477522 0.08719482407742317 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 137789 6476 YEQGPDTPVS True H1975_Epitope_Rep2 1091.4771190372699 1091.4760299358602 29.826 2 -0.009118102597605022 0.010944121630477522 0.08720104059596138 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 38391 8594 HELPTATQKL True PC9_epitope_Rep4 1136.6189726740402 1136.61733490379 40.536 3 -0.009127955795234644 0.010944121630477522 0.08721576737325389 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-3|PPP1R21'] 98333 12606 SEWLIRPP True NCI_RA007_Epitope_Rep4 996.5392658013599 996.53816993586 55.513 2 -0.009135386204341525 0.010944121630477522 0.08722687423654044 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 20813 16983 EQIHTILQV True PC9_epitope_Rep5 1079.59750895347 1079.59640993586 70.343 2 -0.009145952648956497 0.010959262978649085 0.08724267062264662 ['ENSG00000163481|ENST00000295704|RNF25', 'ENST00000463188.5_1_2:219529923-219536693:-|nuORF'] 106711 9633 STVEKLYAA True PC9_epitope_Rep5 980.5178616504397 980.51676993586 42.018 2 -0.00915369016811239 0.010959262978649085 0.08725423924404273 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 96450 7272 SAAHAIVSV True PC9_epitope_Rep6 853.46576650793 853.46466993586 37.106 2 -0.009173397734442592 0.010959262978649085 0.08728370986918912 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 29490 21638 FVFPGELLL True H1975_Epitope_Rep1 1033.5848190114498 1033.58427496793 89.919 1 -0.009201159530035455 0.010959262978649085 0.08732523740537611 ['ENSG00000105281|ENST00000542575|SLC1A5'] 80384 8621 PGHLQEGFG True PC9_epitope_Rep5 940.4402800360799 940.43918993586 38.103 2 -0.009212969633614518 0.010959262978649085 0.0873429080566725 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 138329 13660 YHDYGHLEL True PC9_epitope_Rep5 1145.51417325233 1145.51251490379 57.566 3 -0.009234511924077562 0.010959262978649085 0.08737514720989413 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 35804 12238 GTITDDVRV True PC9_epitope_Rep1 974.50327421546 974.50216993586 51.933 2 -0.009266214544862464 0.010959262978649085 0.08742260802536113 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 96667 20257 SAIVNLPGC True PC9_epitope_Rep1 872.4425885351999 872.44148993586 82.747 2 -0.009286970880857073 0.010959262978649085 0.08745369201694482 ['ENSG00000181789|ENST00000314797|COPG1'] 48882 6235 KEAPSPFQA True H1975_Epitope_Rep3 973.4868958753299 973.48578993586 28.995 2 -0.0093081667314783 0.010959262978649085 0.08748544274774014 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 35068 9433 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 41.239 2 -0.00932432438864242 0.010959262978649085 0.08750965221492796 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 46303 11335 ISQFLQAA True H1975_Epitope_Rep2 876.4705175351999 876.46942993586 48.65 2 -0.009332738908023502 0.010959262978649085 0.08752226190874314 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 5834 12892 APFDLFENK True H1975_Epitope_Rep1 1079.52876068731 1079.52766993586 54.66 2 -0.009345028967641097 0.010959262978649085 0.08754068179021339 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 68 13058 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44794993586 55.35 2 -0.00935536746827097 0.010959262978649085 0.08755617899471153 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 104779 9634 SQWVKAHEL True PC9_epitope_Rep5 1096.56654317836 1096.5654499358602 42.021 2 -0.00936053391378166 0.010959262978649085 0.08756392416191472 ['ENSG00000241685|ENST00000262942|ARPC1A', 'ENST00000441989.6_2_7:98935832-98937548:+|nuORF'] 54559 4720 KYISKPENL True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 25.515 2 -0.009369559860342878 0.010959262978649085 0.08757745644852044 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 88987 19125 QVIPQFQTV True PC9_epitope_Rep4 1058.5760452328998 1058.57494993586 81.657 2 -0.009372758470400075 0.010959262978649085 0.0875822523884642 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 583 11161 AARLPLDAA True PC9_epitope_Rep1 896.5079656730799 896.50686993586 47.816 2 -0.009376760787797877 0.010959262978649085 0.0875882536699346 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 31982 6158 GEQEGAMVAA True NCI_RA007_Epitope_Rep3 961.4174959861698 961.41638993586 31.223 2 -0.009399684335507995 0.010959262978649085 0.08762263235015019 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 8425 19246 ATMPVVPSV True PC9_epitope_Rep5 899.4786396907499 899.47754993586 79.068 2 -0.009400864209565101 0.010959262978649085 0.08762440209257338 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2', 'ENST00000479237.5_1_9:131770965-131773053:-|nuORF', 'ENST00000461811.5_1_9:131770965-131772716:-|nuORF'] 128711 13199 VPWMPPGKSSA True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 55.807 2 -0.009404384486357673 0.010959262978649085 0.08762968246183674 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 89073 11907 QVMQGMGVSA True PC9_epitope_Rep6 1006.4575869763398 1006.45648993586 57.036 2 -0.009411098190680423 0.010959262978649085 0.08763975359074137 ['ENSG00000169813|ENST00000682386|HNRNPF'] 39236 16518 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58057496793 71.509 1 -0.009429307662925511 0.010959262978649085 0.08766707371143644 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 115121 10983 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 47.568 2 -0.00944871425276223 0.010959262978649085 0.08769619691039074 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 60917 17392 LIAHRKFK True PC9_epitope_Rep3 1011.6341692457099 1011.63306993586 72.068 2 -0.009460528169360327 0.010959262978649085 0.08771392943414771 ['ENSG00000277149|ENST00000620995|TYW1B', 'nc|ENSG00000277149|Q6NUM6-2|TYW1B', 'ENSG00000198874|ENST00000359626|TYW1'] 103674 5836 SPVFRTGSE True PC9_epitope_Rep6 978.4770594676199 978.47596993586 30.662 2 -0.009497064278505843 0.010959262978649085 0.08776878659788319 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 130377 17174 VSLALALNGV True PC9_epitope_Rep6 955.57023157647 955.56912993586 78.648 2 -0.009505355989267784 0.010959262978649085 0.08778123976410301 ['ENSG00000203805|ENST00000398250|PLPP4'] 17841 5018 EHTQTVSQL True PC9_epitope_Rep4 1041.50908787189 1041.50798993586 25.925 2 -0.00952628026952253 0.010959262978649085 0.08781267142687124 ['ENSG00000135968|ENST00000309863|GCC2'] 134786 21910 VYTVVDEMF True PC9_epitope_Rep2 1101.5052483614097 1101.50467496793 89.753 1 -0.009531707416798695 0.010959262978649085 0.08782082525688668 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 86158 10234 QIDTGENLY True H1975_Epitope_Rep2 1051.48220441771 1051.4816749679298 44.37 1 -0.009573267056370604 0.010980375035473378 0.08788328387285373 ['ENST00000575471.2_1_16:31925765-31927799:+|nuORF', 'ENSG00000185947|ENST00000300870|ZNF267'] 102213 12782 SLSDIEIY True H1975_Epitope_Rep3 938.4596780679799 938.45912496793 54.382 1 -0.009580568289903212 0.010980375035473378 0.08789426008615418 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 73577 14374 MVVESVERI True PC9_epitope_Rep5 1060.5586809166 1060.55758993586 60.289 2 -0.009607564173304436 0.010980375035473378 0.0879348528938048 ['ENSG00000166886|ENST00000300131|NAB2', 'nc|ENSG00000166886|Q15742-3|NAB2', 'nc|ENSG00000166886|Q15742-2|NAB2'] 103628 5294 SPTKNNIAV True PC9_epitope_Rep1 942.5134449763399 942.51234993586 25.206 2 -0.00962645946533562 0.010998843375597407 0.0879632734505431 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 69633 15286 LVDPYMHEV True PC9_epitope_Rep1 1101.51648175145 1101.5153899358602 63.62 2 -0.009627542085801851 0.010998843375597407 0.08796490203644379 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.S811Tfs*2|1|0.35|ENSG00000064313|chr8:119762511-119762541|TTATCCAAAGTTCTAACTTCATTATTCACAC/-|frameshift_variant'] 52874 9973 KPFGQVIST True PC9_epitope_Rep4 975.5389314481899 975.53782993586 46.022 2 -0.009629540298648374 0.010998843375597407 0.08796790800710498 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF'] 108624 10710 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 46.085 3 -0.009650608890975356 0.010998843375597407 0.08799960678696479 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 48932 7451 KEEEEVFQP True H1975_Epitope_Rep2 1133.5240692296898 1133.5229699358601 33.605 2 -0.009668763465914654 0.010998843375597407 0.08802692812617502 ['FBXL5|p.L419Ffs*16|1|0.08|ENSG00000118564|chr4:15625845-15625846|-/A|frameshift_variant', 'nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 2749 4050 AETKPPM[Oxidation]AP True H1975_Epitope_Rep3 956.4637182830398 956.46262993586 20.707 2 -0.009672856919615301 0.010998843375597407 0.08803308935767552 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 102863 12590 SPAAPVITA True PC9_epitope_Rep3 825.45961849833 825.45852993586 53.452 2 -0.009672893157131837 0.010998843375597407 0.08803314390174435 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 7569 13251 ASETGFLTY True H1975_Epitope_Rep1 987.4549270407099 987.45382993586 56.066 2 -0.00967363241614075 0.010998843375597407 0.08803425662684077 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 109016 21249 TAIDILTTC True PC9_epitope_Rep3 949.4790336135701 949.47792993586 87.027 2 -0.009690737064496666 0.010998843375597407 0.08806000530427147 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 27360 14458 FLSSEAANV True PC9_epitope_Rep1 936.4552613938799 936.45416993586 60.436 2 -0.009699400168217793 0.010998843375597407 0.08807304855347708 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 104045 2553 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44521496793 14.731 1 -0.009704184523947867 0.010998843375597407 0.08808025254267315 ['ENSG00000130935|ENST00000253247|NOL11'] 6463 13092 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37888993586 55.362 2 -0.009707757900171527 0.010998843375597407 0.08808563340055492 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 25358 8584 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.4761749679299 37.972 1 -0.009720267838620594 0.010998843375597407 0.08810447303937552 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 84154 21065 PYFNAPVYL True PC9_epitope_Rep4 1082.5436824754597 1082.5431749679299 89.185 1 -0.009742021323028911 0.010998843375597407 0.08813724038643321 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 93100 8846 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 38.978 2 -0.009748389285759596 0.011012495366029178 0.08814683419314964 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 35710 6328 GTFGGLGSK True NCI_RA007_Epitope_Rep2 822.42356734278 822.42246993586 29.221 2 -0.009761070684160841 0.011012495366029178 0.08816594198191895 ['ENSG00000124942|ENST00000378024|AHNAK'] 48511 12727 KAINVFVSA True PC9_epitope_Rep4 947.54401682863 947.54290993586 56.809 2 -0.009770732848707926 0.011012495366029178 0.08818050259557696 ['ENSG00000114209|ENST00000392750|PDCD10'] 73544 18018 MVPTSQGFTEV True PC9_epitope_Rep5 1194.5590748394202 1194.55796993586 74.322 2 -0.00979400249303357 0.011012495366029178 0.0882155766776209 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 103346 11548 SPNGQFVAP True PC9_epitope_Rep4 915.4450310633499 915.44392993586 52.181 2 -0.009795069598607148 0.011012495366029178 0.08821718536417901 ['ENSG00000121741|ENST00000610343|ZMYM2'] 36510 19541 GVGPVNISV True PC9_epitope_Rep1 840.4705175352 840.46942993586 79.987 2 -0.009814730941523315 0.011012495366029178 0.08824682921985563 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 46950 19980 ITPENLPQI True PC9_epitope_Rep3 1023.5600608155898 1023.5589699358601 82.098 2 -0.009827518374370974 0.011012495366029178 0.0882661131180075 ['ENSG00000015479|ENST00000394805|MATR3'] 134818 18939 VYTWPSGNTF True PC9_epitope_Rep6 1170.53457434374 1170.53346993586 85.494 2 -0.00982881943520426 0.011012495366029178 0.08826807533990066 ['JPH2|p.T601Nfs*41|1|0.4|ENSG00000149596|chr20:44115873-44115874|-/T|frameshift_variant', 'ENSG00000149596|ENST00000372980|JPH2', 'nc|ENSG00000149596|Q9BR39-2|JPH2'] 36088 21401 GVAETLVLV True PC9_epitope_Rep5 899.5327834385898 899.5322349679301 87.382 1 -0.009830486068430037 0.011012495366029178 0.08827058895499153 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 57 11283 AAAGSPLSL True H1975_Epitope_Rep2 785.4283183700501 785.4277649679301 48.447 1 -0.009835390465098 0.011012495366029178 0.0882779860728942 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 21666 6417 ERSDVQIHV True PC9_epitope_Rep2 1081.5516213902101 1081.5505299358601 30.092 2 -0.009855704796189054 0.011012495366029178 0.08830863034944868 ['nc|ENSG00000180228|O75569-3|PRKRA', 'nc|ENSG00000180228|O75569-2|PRKRA', 'ENSG00000180228|ENST00000325748|PRKRA', 'PRKRA|p.T65A|1|0.12|ENSG00000180228|chr2:178450284-178450284|T/C|missense_variant', 'ENST00000466165.1_1_2:179312230-179315757:-|nuORF', 'ENST00000463882.1_1_2:179314855-179315757:-|nuORF', 'ENST00000470200.5_1_2:179312233-179316155:-|nuORF', 'ENST00000460433.5_1_2:179312233-179315416:-|nuORF'] 118362 23012 TYNMVLNLL True PC9_epitope_Rep2 1079.56851732431 1079.56740993586 94.009 2 -0.009889825307427592 0.011012495366029178 0.08836011920271278 ['ENSG00000039123|ENST00000230640|MTREX'] 115099 16690 TRDENPFASL True PC9_epitope_Rep4 1148.5462016565998 1148.5451099358602 72.172 2 -0.009890888382828842 0.011012495366029178 0.08836172377481095 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B'] 73196 15141 MRYVASYL True PC9_epitope_Rep4 1001.5004377644898 1001.49934993586 66.167 2 -0.00989637081747632 0.011012495366029178 0.08836999913229338 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 48040 23429 IYLPYLQNW True PC9_epitope_Rep1 1208.6229954253201 1208.62247496793 94.904 1 -0.00990204044115543 0.011012495366029178 0.08837855764751998 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 59828 11524 LGEYGFQNA True NCI_RA007_Epitope_Rep1 997.4505103666099 997.44940993586 48.793 2 -0.009908145156625803 0.011012495366029178 0.08838777364266626 ['CON__P02769'] 109889 12615 TEFIHLISS True NCI_RA007_Epitope_Rep4 1045.54441075145 1045.5433099358602 55.55 2 -0.00991577882456153 0.011012495366029178 0.08839929883361217 ['ENSG00000117505|ENST00000370272|DR1'] 36278 15097 GVDVTLPRV True PC9_epitope_Rep6 954.5498304850599 954.54872993586 70.129 2 -0.009935177406431102 0.011012495366029178 0.08842859155492784 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 71801 5841 M[Oxidation]EGPTPVSA True H1975_Epitope_Rep3 903.4007836733099 903.40023496793 27.482 1 -0.009935376347282145 0.011012495366029178 0.08842889200200524 ['ENSG00000198786|ENST00000361567|MT-ND5'] 72776 22119 MPAFPLPYA True PC9_epitope_Rep2 1005.4993751353298 1005.49826993586 90.557 2 -0.00995520936579169 0.011012495366029178 0.08845884831113894 ['ENSG00000185359|ENST00000329138|HGS', 'ENST00000570355.1_1_17:79663642-79664026:+|nuORF', 'ENST00000571647.1_1_17:79663564-79664029:+|nuORF'] 130193 3678 VSELKEELKK True NCI_RA007_Epitope_Rep4 1201.69180326113 1201.69015490379 20.257 3 -0.009969110377013098 0.011012495366029178 0.08847984927793758 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'HNRNPU|p.Q207Sfs*132|1|0.2|ENSG00000153187|chr1:244863689-244863689|G/-|frameshift_variant'] 64651 9003 LPTTNSGVSA True PC9_epitope_Rep3 945.47672511445 945.47562993586 39.575 2 -0.009969244147650587 0.011012495366029178 0.08848005139014667 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 85403 5613 QEVPGPAA True H1975_Epitope_Rep3 767.3813681776298 767.3808149679301 26.627 1 -0.010002316351797552 0.011012495366029178 0.08853003030494876 ['ENSG00000146278|ENST00000336032|PNRC1'] 112977 21190 TLLRLLYEA True PC9_epitope_Rep3 1090.6386454894598 1090.63754993586 86.795 2 -0.0100026501368013 0.011012495366029178 0.08853053483027443 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 9945 19787 AYM[Oxidation]PHTFFI True PC9_epitope_Rep5 1141.52665289277 1141.52554993586 81.156 2 -0.010005166493514059 0.011012495366029178 0.08853433844259131 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 62156 7564 LLEKEREDLY True H1975_Epitope_Rep1 1306.6768814729799 1306.6757899358602 34.087 2 -0.01002053462836846 0.011012495366029178 0.08855757087605885 ['ENSG00000102189|ENST00000322349|EEA1', 'EEA1|p.S653*|1|0.32|ENSG00000102189|chr12:92813065-92813065|G/-|frameshift_variant'] 106440 2606 STIPPHVQK True NCI_RA007_Epitope_Rep5 1005.56072952193 1005.55962993586 14.732 2 -0.010066436068613703 0.011012495366029178 0.0886269884458351 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-3|TGFBR2'] 130807 10465 VTANTMENV True PC9_epitope_Rep5 977.44879611445 977.44768993586 45.239 2 -0.010089210877157485 0.011012495366029178 0.08866144626792875 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant'] 139444 19184 YLPPGFLSA True PC9_epitope_Rep6 963.50656869075 963.50546993586 86.443 2 -0.010136580456705756 0.011012495366029178 0.08873314750149282 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 14902 22103 DYATIFNNL True PC9_epitope_Rep4 1069.5080252427301 1069.50747496793 93.236 1 -0.010158264670818127 0.011012495366029178 0.08876598436884435 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 71357 19054 LYRLKFNEF True PC9_epitope_Rep1 1228.6604435632 1228.65934993586 78.082 2 -0.01015904333191141 0.011012495366029178 0.08876716368053986 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 105421 15533 SRSVALAVL True PC9_epitope_Rep5 914.5549158655 914.55380993586 64.758 2 -0.010173499766537837 0.011012495366029178 0.08878906062121805 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 10032 5449 AYRQGHFTY True PC9_epitope_Rep6 1141.53049202281 1141.52884490379 28.882 3 -0.010193300062905555 0.011012495366029178 0.08881905836719087 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 108939 12773 TADSGYYVL True NCI_RA007_Epitope_Rep4 987.45492704071 987.4543749679301 56.192 1 -0.010223178816361103 0.011012495366029178 0.08886433943911902 ['nc|ENSG00000179403|Q6PCB0-2|VWA1', 'ENSG00000179403|ENST00000476993|VWA1'] 16108 6548 EEAGAELQA True H1975_Epitope_Rep2 916.4137905047199 916.41268993586 30.097 2 -0.01025181480025515 0.011034061668629247 0.08890775325983283 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 72803 18821 MPFGNVVSA True PC9_epitope_Rep4 920.4425885351999 920.44148993586 80.48 2 -0.010309407913140986 0.011054662800078495 0.08899511567527611 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 19650 14893 ELRARQLEL True PC9_epitope_Rep3 1126.64585612822 1126.64422490379 62.422 3 -0.010312084254826803 0.011054662800078495 0.08899917694712238 ['RCCD1-BLM|2|fusion', 'RCCD1-BLM|1|fusion', 'ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 57530 9639 LEDPSQLPP True H1975_Epitope_Rep1 994.49712620586 994.49602993586 42.005 2 -0.01032286705420698 0.011054662800078495 0.08901554093642408 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 60556 6880 LHEEPRAVWP True NCI_RA007_Epitope_Rep3 1232.6302060640799 1232.62855490379 34.17 3 -0.010339048843301517 0.011054662800078495 0.08904010264872436 ['ENST00000597853.5_1_19:49559435-49560608:-|nuORF'] 1187 13013 AEASMVIAV True H1975_Epitope_Rep2 889.45790424617 889.4573549679301 55.174 1 -0.01034869130024959 0.011054662800078495 0.08905474096403153 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'ENST00000545930.5_1_11:61091835-61095006:-|nuORF'] 108648 7995 SYPRRFSTL True PC9_epitope_Rep6 1125.59309227937 1125.59143490379 40.217 3 -0.010390650216248371 0.011066814805132563 0.08911846012810819 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 70303 17101 LVSDSALYF True H1975_Epitope_Rep3 1013.50696261357 1013.50637496793 71.399 1 -0.010395071331563937 0.011066814805132563 0.0891251760499579 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 64855 13234 LQDPSAIKI True PC9_epitope_Rep4 983.5651461960299 983.56404993586 58.8 2 -0.01042076306762164 0.011066814805132563 0.08916421070315562 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 40586 5751 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 30.288 2 -0.010464502556934631 0.011066814805132563 0.08923069546328995 ['ENSG00000099812|ENST00000215582|MISP'] 140116 12809 YQNQGIYQV True PC9_epitope_Rep6 1111.52982331647 1111.5287299358602 60.773 2 -0.010466889580082062 0.011066814805132563 0.0892343248415632 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 29805 4882 FVPTSAPR True H1975_Epitope_Rep3 873.4708518883699 873.46974993586 23.904 2 -0.010479730238553753 0.011066814805132563 0.08925385046411377 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 39642 17952 HLPEELAEL True PC9_epitope_Rep4 1049.53932537101 1049.53822993586 77.105 2 -0.010486803567342256 0.011066814805132563 0.08926460759242147 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 120600 15033 VEHLQFLLS True NCI_RA007_Epitope_Rep4 1084.59169529704 1084.5905899358602 65.339 2 -0.01051223601637362 0.011066814805132563 0.08930329327859522 ['nc|ENSG00000170085|Q8NDZ2-4|SIMC1', 'nc|ENSG00000170085|Q8NDZ2-3|SIMC1', 'nc|ENSG00000170085|Q8NDZ2|SIMC1', 'ENSG00000170085|ENST00000429602|SIMC1'] 137223 23580 YAYPYIIDF True PC9_epitope_Rep3 1163.5539128059897 1163.55280993586 95.985 2 -0.010515441963992008 0.011066814805132563 0.08930817078096437 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 52509 11800 KLAPPLVTL True NCI_RA007_Epitope_Rep3 950.6164534929001 950.61534993586 53.531 2 -0.01052136988299299 0.011066814805132563 0.0893171899910802 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 75989 21393 NLVPMIIHL True PC9_epitope_Rep2 1048.61032256664 1048.6092299358602 87.759 2 -0.010532626759062264 0.011066814805132563 0.08933431897079 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.D378N|1|0.11|ENSG00000186432|chr3:160514082-160514082|C/T|missense_variant'] 64317 22157 LPLAGDAVI True PC9_epitope_Rep2 867.50656869075 867.5060249679301 90.713 1 -0.010571684913120489 0.011066814805132563 0.0893937706313393 ['ENST00000521369.2_1_8:107282449-107284274:+|nuORF'] 118213 9691 TYKVISNEF True NCI_RA007_Epitope_Rep5 1099.5549754351498 1099.5538699358601 43.913 2 -0.010624974909422089 0.011066814805132563 0.08947493256710844 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 94838 14524 RSSLGLAVL True PC9_epitope_Rep2 914.5549158655 914.55380993586 61.139 2 -0.010630452148631625 0.011066814805132563 0.08948327764266471 ['ENST00000585203.6_1_17:7127347-7127504:+|nuORF'] 31596 11416 GEEPDIAVP True H1975_Epitope_Rep2 925.4392769765699 925.43872496793 48.962 1 -0.010654765799639148 0.011066814805132563 0.08952032871496367 ['ENSG00000185298|ENST00000329214|CCDC137'] 87247 17955 QPLPVILHV True PC9_epitope_Rep6 1014.6226015025001 1014.62150993586 81.693 2 -0.010667591019167793 0.011066814805132563 0.08953987740535557 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 28153 13241 FRDHLEEVL True PC9_epitope_Rep4 1156.58767254576 1156.58602490379 58.828 3 -0.010676359070655377 0.011066814805132563 0.08955324383448483 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 141566 15673 YTPEAFNWR True PC9_epitope_Rep6 1182.54580773378 1182.54470993586 72.496 2 -0.010693477410847469 0.011066814805132563 0.08957934411783239 ['DPP3-FKBP2|1|fusion', 'nc|ENSG00000254986|Q9NY33-4|DPP3', 'DPP3-FKBP2|2|fusion', 'ENSG00000254986|ENST00000531863|DPP3'] 72846 5709 MPNGTPHPTA True PC9_epitope_Rep3 1021.46511488493 1021.46400993586 27.033 2 -0.010695617669857015 0.011066814805132563 0.08958260776283757 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 124821 11321 VHGPPVQL True PC9_epitope_Rep5 845.47593726881 845.47484993586 48.54 2 -0.01069595192757535 0.011066814805132563 0.08958311747481004 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 134489 10593 VYPTKTFPNL True NCI_RA007_Epitope_Rep3 1178.6335601090198 1178.6324699358602 48.717 2 -0.010702809905227565 0.011066814805132563 0.08959357573041099 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 64043 16076 LPALAGVSA True PC9_epitope_Rep6 797.46470387877 797.4641549679301 74.164 1 -0.01071768409655621 0.011066814805132563 0.08961626164861371 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 6406 6817 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 31.626 2 -0.010734117463403966 0.011066814805132563 0.08964133057325126 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 81789 18429 PLPPLPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 75.907 2 -0.01073988597060367 0.011066814805132563 0.08965013160696465 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 116095 5300 TSREVQTAV True PC9_epitope_Rep5 989.5141732523299 989.51306993586 25.4 2 -0.010740924360940898 0.011066814805132563 0.08965171595143591 ['ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1'] 87929 15774 QRLDLQIKL True PC9_epitope_Rep4 1125.68699266421 1125.6853349037901 68.598 3 -0.010757517011212348 0.011066814805132563 0.0896770353417177 ['nc|ENSG00000140280|Q8IV50-2|LYSMD2', 'ENSG00000140280|ENST00000267838|LYSMD2'] 64652 8964 LPTTNSGVSA True PC9_epitope_Rep5 945.47672511445 945.47562993586 39.423 2 -0.01076130858404054 0.011066814805132563 0.08968282180184842 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 6284 4709 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 23.206 2 -0.010807333447541327 0.011066814805132563 0.08975308422214849 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 111170 9869 THGPPVQL True PC9_epitope_Rep3 847.45520182423 847.45410993586 42.919 2 -0.010823708489294391 0.011066814805132563 0.08977809254784236 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 109635 9491 TEALHFVAA True H1975_Epitope_Rep2 957.4919812557698 957.49088993586 41.476 2 -0.01083142350659781 0.011066814805132563 0.08978987688999093 ['ENSG00000125817|ENST00000379751|CENPB'] 2305 6065 AEPAKIEAFR True NCI_RA007_Epitope_Rep4 1130.6084079903399 1130.6067749037902 29.945 3 -0.01084047724895849 0.011066814805132563 0.08980370754264856 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 91983 9102 RKQMVIDVL True NCI_RA007_Epitope_Rep5 1100.6375999436398 1100.6365099358602 41.664 2 -0.010849866155284145 0.011066814805132563 0.08981805187210265 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 68391 5142 LTEREGALKY True H1975_Epitope_Rep2 1178.6295373577398 1178.62789490379 24.856 3 -0.010849955710467235 0.011066814805132563 0.08981818870232346 ['nc|ENSG00000105963|O75689-3|ADAP1', 'ENSG00000105963|ENST00000265846|ADAP1', 'nc|ENSG00000105963|O75689-2|ADAP1', 'ENST00000478000.5_1_7:938560-944975:-|nuORF', 'ENST00000481406.1_1_7:943651-944759:-|nuORF'] 54439 15837 KYFLWVVKF True NCI_RA007_Epitope_Rep5 1228.7008518231999 1228.6997499358602 67.638 2 -0.010865998850199659 0.011066814805132563 0.08984270331383827 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 25574 5593 FEKPDSVAA True H1975_Epitope_Rep3 962.4709114580198 962.46980993586 26.553 2 -0.010867539525037271 0.011066814805132563 0.08984505779365227 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 130757 11120 VSYQSVLS True H1975_Epitope_Rep1 881.4494477374499 881.4488949679301 47.738 1 -0.010933663482738307 0.011066814805132563 0.08994615258579723 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF', 'ENST00000590884.5_1_18:43437816-43458370:-|nuORF'] 132588 9023 VVESAYEVIK True NCI_RA007_Epitope_Rep2 1135.6124903112698 1135.6119749679299 39.698 1 -0.010944334564745093 0.011066814805132563 0.08996247518759755 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 25357 8602 FEADPPGQVA True H1975_Epitope_Rep1 1029.47672511445 1029.47562993586 38.016 2 -0.010959326698926476 0.011066814805132563 0.08998541103984087 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 80560 8300 PGPPPPPPP True PC9_epitope_Rep2 851.45413919507 851.45304993586 37.29 2 -0.010964709091358505 0.011066814805132563 0.08999364640273197 ['ENST00000375142.5_2_1:19811931-19811970:-|nuORF', 'ENST00000584336.1_1_17:37686825-37687566:+|nuORF', 'ENSG00000125966|ENST00000246186|MMP24', 'ENSG00000099822|ENST00000251287|HCN2', 'ENSG00000182742|ENST00000332503|HOXB4', 'nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3', 'ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'FOXK1|p.R191Pfs*113|1|0.14|ENSG00000164916|chr7:4740844-4740845|-/T|frameshift_variant', 'ENSG00000136928|ENST00000259455|GABBR2', 'ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12'] 86091 12342 QHSVPLQL True PC9_epitope_Rep2 920.50796567308 920.50686993586 52.784 2 -0.010965769942797604 0.011066814805132563 0.0899952696311892 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 594 9393 AARLPLDAA True PC9_epitope_Rep6 896.5079656730799 896.50686993586 46.331 2 -0.010974905510385838 0.011084977568709438 0.09000924903390153 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 14748 12710 DVNAAIATIK True PC9_epitope_Rep4 1014.57095985246 1014.56986993586 56.744 2 -0.010975003947314908 0.011084977568709438 0.09000939967257973 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 52884 8844 KPFKEFVEA True PC9_epitope_Rep4 1093.5807962601698 1093.5796899358602 41.55 2 -0.010993963956747208 0.011084977568709438 0.09003841779611833 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 39540 7083 HLGALLAR True PC9_epitope_Rep4 849.51847078713 849.51736993586 34.511 2 -0.011009895930915753 0.011084977568709438 0.09006280691864775 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 5251 20767 ALPPVLTTV True PC9_epitope_Rep2 909.55351888317 909.55297496793 85.323 1 -0.011014016281328016 0.011084977568709438 0.09006911526873407 ['ENSG00000155506|ENST00000518297|LARP1'] 75682 23339 NLIDLDDLYV True PC9_epitope_Rep2 1191.6023195503901 1191.60177496793 95.248 1 -0.011026996878598174 0.011084977568709438 0.09008899100647917 ['ENSG00000125676|ENST00000245838|THOC2'] 115185 5517 TRDPQFQKL True PC9_epitope_Rep6 1131.6036569630699 1131.6020249037902 29.209 3 -0.011055138684336559 0.011084977568709438 0.09013209260943483 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF'] 35795 12898 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 61.143 2 -0.011091987827009006 0.011084977568709438 0.0901885534328826 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 108337 21412 SYLDNFIKI True PC9_epitope_Rep2 1111.59136094387 1111.59026993586 87.832 2 -0.011100653719582706 0.011084977568709438 0.09020183526543134 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 4772 17066 ALDSTNVEL True PC9_epitope_Rep3 960.47639076128 960.47584496793 70.796 1 -0.011104896800720333 0.011084977568709438 0.09020833897966575 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 58204 13037 LELDTNLPA True H1975_Epitope_Rep3 984.51277627 984.51222496793 55.386 1 -0.01110754007897224 0.011084977568709438 0.09021239072264335 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 90295 4189 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 21.231 3 -0.011115594147583466 0.011084977568709438 0.09022473721737201 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 130959 8773 VTDLAGNEY True H1975_Epitope_Rep2 980.4450906330001 980.44398993586 38.709 2 -0.01111950837009341 0.011084977568709438 0.09023073798335213 ['ENSG00000197081|ENST00000356956|IGF2R'] 96642 10006 SAIGLADPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 46.451 2 -0.011132101871566158 0.011084977568709438 0.09025004667988029 ['ENSG00000186838|ENST00000335426|SELENOV'] 85277 12274 QEQLRLQLP True H1975_Epitope_Rep2 1123.6349570913499 1123.63386993586 52.296 2 -0.011134197519614319 0.011084977568709438 0.0902532600821427 ['ENSG00000160803|ENST00000368309|UBQLN4'] 132332 21234 VTYPGELLL True PC9_epitope_Rep4 1003.5589981864299 1003.55847496793 89.84 1 -0.011142717318862412 0.01110506260206859 0.09026632495607632 ['ENSG00000146386|ENST00000367660|ABRACL'] 136963 9508 YAGSGNVL True PC9_epitope_Rep6 779.38136817763 779.3808149679301 46.831 1 -0.011154261044356252 0.01110506260206859 0.09028402917924643 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 8889 20469 AVFPSIVG True PC9_epitope_Rep2 788.4432401582 788.44269496793 84.163 1 -0.011156392320261357 0.01110506260206859 0.09028729812760382 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 86165 12296 QIEEAGWSY True H1975_Epitope_Rep1 1081.4716397340098 1081.47107496793 52.322 1 -0.011157319521405954 0.01110506260206859 0.0902887202950406 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 54107 21067 KVLPGILFL True PC9_epitope_Rep4 998.6528390016199 998.65174993586 89.193 2 -0.01116663938361103 0.01110506260206859 0.09030301628916172 ['ENSG00000104998|ENST00000263379|IL27RA'] 87844 13251 QRGPPIIL True PC9_epitope_Rep4 892.5494365622399 892.54832993586 58.868 2 -0.011167751829613154 0.01110506260206859 0.09030472281321501 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 76604 9722 NQMPTQPQV True PC9_epitope_Rep6 1041.49132963277 1041.49022993586 47.8 2 -0.011190161716071545 0.01110506260206859 0.09033910532683564 ['ENSG00000100393|ENST00000263253|EP300'] 15807 20953 EDEAESDIFSI True PC9_epitope_Rep5 1253.52994245577 1253.52884993586 85.654 2 -0.011258110685144653 0.011125868187855168 0.09044341594730491 ['ENSG00000108561|ENST00000225698|C1QBP'] 137017 23658 YALDLSTFL True PC9_epitope_Rep3 1041.53826274185 1041.5371699358602 96.286 2 -0.011262444865278774 0.011125868187855168 0.09045007252002334 ['ENSG00000137331|ENST00000259874|IER3'] 48222 21489 IYPWVHVVI True PC9_epitope_Rep1 1124.6382515666398 1124.6371499358602 87.501 2 -0.011275409126935606 0.011125868187855168 0.09046998562137935 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 67853 20325 LTAPALALA True PC9_epitope_Rep3 839.5116540711899 839.51110496793 83.43 1 -0.011277041286273649 0.011125868187855168 0.0904724928483899 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 93490 9915 RQKAVSLFL True NCI_RA007_Epitope_Rep4 1060.6393141958 1060.63820993586 44.984 2 -0.011282964945625109 0.01114618482638511 0.09048159285856933 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 80784 14196 PHLENVVL True PC9_epitope_Rep2 919.51271670035 919.51160993586 59.873 2 -0.01128745392086418 0.01114618482638511 0.09048848933943512 ['ENST00000485726.1_1_7:103828364-103848439:-|nuORF', 'nc|ENSG00000164815|O43913-2|ORC5', 'ENSG00000164815|ENST00000297431|ORC5'] 96446 8048 SAAHAIVSV True PC9_epitope_Rep2 853.46576650793 853.46466993586 36.317 2 -0.011292507578450402 0.01114618482638511 0.0904962538176828 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 99090 12817 SHGPIAVL True PC9_epitope_Rep1 792.4493881678001 792.44828993586 54.175 2 -0.011294238450850086 0.01114618482638511 0.09049891325709893 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 134247 19313 VYNAVLELF True NCI_RA007_Epitope_Rep3 1066.5698972233 1066.5688099358601 84.317 2 -0.011297597431591063 0.01114618482638511 0.09050407440736408 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22'] 101116 19588 SLGLPLLW True H1975_Epitope_Rep2 897.53238951577 897.53184496793 81.277 1 -0.011345013158713281 0.01114618482638511 0.09057695308186228 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'nc|ENSG00000133816|O94851-2|MICAL2', 'ENST00000530691.5_1_11:12229562-12281716:+|nuORF'] 35634 17861 GTDGFVINL True PC9_epitope_Rep2 934.47599683846 934.47544496793 74.004 1 -0.011400959249278366 0.01116601005593888 0.09066299910168356 ['ENSG00000100079|ENST00000215886|LGALS2'] 71393 16797 LYSEVSHLL True PC9_epitope_Rep6 1059.56006081559 1059.5589699358602 77.115 2 -0.01142429394115894 0.01116601005593888 0.09069890618170402 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 98164 8313 SESRFFVSS True H1975_Epitope_Rep3 1044.48762415132 1044.48652993586 36.96 2 -0.01142984499517598 0.01116601005593888 0.09070744961651811 ['ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG', 'nc|ENSG00000172270|P35613-2|BSG'] 71302 15351 LYQEIIHYF True NCI_RA007_Epitope_Rep5 1224.61791004488 1224.6168099358601 65.752 2 -0.011434331959091661 0.01116601005593888 0.09071435578386658 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 17360 10859 EHDGSLFQA True PC9_epitope_Rep2 1002.4406739589 1002.43956993586 47.087 2 -0.011458988887179312 0.01116601005593888 0.09075231377517332 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 121195 8305 VESPESLAA True H1975_Epitope_Rep1 901.4392769765699 901.43816993586 36.877 2 -0.011459012930476938 0.01116601005593888 0.09075235079426848 ['ENSG00000052749|ENST00000370992|RRP12'] 17618 6526 EHINSVSAM True PC9_epitope_Rep4 986.44913046762 986.44802993586 32.224 2 -0.011468771397510779 0.01116601005593888 0.09076737668150459 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 7686 10182 ASLMHSFILK True NCI_RA007_Epitope_Rep3 1145.6267009067699 1145.62504490379 47.137 3 -0.011478004879662631 0.01116601005593888 0.09078159590844913 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 62730 15321 LLLPGELA True H1975_Epitope_Rep3 824.5007550343199 824.50020496793 64.341 1 -0.011510070671232817 0.0111846113673949 0.0908309889060379 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'HIST1H2BE|p.V99L|1|0.18|ENSG00000278588|chr6:26184090-26184090|G/T|missense_variant', 'ENST00000600318.1_1_19:58600016-58609306:-|nuORF', 'ENST00000598497.1_1_19:58600016-58601841:-|nuORF', 'ENST00000594191.5_1_19:58598487-58609571:-|nuORF', 'nc|ENSG00000121413|Q8TBC5-4|ZSCAN18', 'ZSCAN18|p.G368Efs*61|1|0.38|ENSG00000121413|chr19:58085115-58085115|C/-|frameshift_variant', 'nc|ENSG00000121413|Q8TBC5-2|ZSCAN18', 'ENSG00000121413|ENST00000601144|ZSCAN18', 'nc|ENSG00000121413|Q8TBC5-3|ZSCAN18', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 102977 22570 SPFFPLVSA True PC9_epitope_Rep2 963.5065686907499 963.50546993586 92.309 2 -0.011513993359096841 0.0111846113673949 0.09083703264328839 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 39047 8647 HHSGNTYFL True PC9_epitope_Rep4 1074.48829285766 1074.4871899358602 40.751 2 -0.011550177813220819 0.0111846113673949 0.09089279658967281 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 9170 14570 AVLGAVVTA True PC9_epitope_Rep6 799.48035394291 799.47924993586 67.941 2 -0.011551459536918749 0.0111846113673949 0.09089477232289735 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 24140 17156 EYPRETFSF True PC9_epitope_Rep4 1174.5294889632999 1174.52838993586 73.996 2 -0.011554222339790775 0.0111846113673949 0.09089903119740134 ['ENST00000473682.5_1_1:111740397-111743081:-|nuORF', 'nc|ENSG00000162777|Q9H6A0-2|DENND2D', 'ENSG00000162777|ENST00000357640|DENND2D'] 80269 4892 PGDSDIIR True NCI_RA007_Epitope_Rep5 871.43994568291 871.43884993586 25.509 2 -0.011556548509232873 0.0111846113673949 0.09090261711412596 ['ENSG00000156482|ENST00000287038|RPL30'] 98839 10477 SGRTTGIVL True PC9_epitope_Rep3 902.5185303567799 902.51742993586 45.237 2 -0.011599002395250396 0.0111846113673949 0.09096808053362368 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 100426 12544 SLAEGLRTV True PC9_epitope_Rep5 944.52909504048 944.52798993586 53.249 2 -0.011616671847357712 0.0111846113673949 0.09099533694022248 ['ENSG00000111331|ENST00000228928|OAS3', 'OAS3|p.G257C|1|0.08|ENSG00000111331|chr12:112946875-112946875|G/T|missense_variant'] 121722 14378 VFLKAGASF True PC9_epitope_Rep4 938.5225531080598 938.52144993586 63.214 2 -0.011629915623215014 0.0111846113673949 0.09101577039445008 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 64598 11090 LPSRFIESA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 53.582 2 -0.011659818954553997 0.0111846113673949 0.09106191993657237 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 98959 7839 SHAQTVVL True PC9_epitope_Rep3 853.46576650793 853.46466993586 35.141 2 -0.011670565074193782 0.0111846113673949 0.09107850856611208 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 114540 15907 TQAPPNVVL True PC9_epitope_Rep2 937.5232813840499 937.52218993586 66.439 2 -0.011683450312951451 0.0111846113673949 0.0910984022785871 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 138385 17308 YHGLTVPL True PC9_epitope_Rep1 898.4912529797799 898.49014993586 71.392 2 -0.011718683710283631 0.0111846113673949 0.09115281610490526 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 85981 13259 QHLAQLQQL True PC9_epitope_Rep1 1077.59309227937 1077.59198993586 55.867 2 -0.011737018795211229 0.011206127466980003 0.09118114201655816 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.Q1101Lfs*31|1|0.16|ENSG00000119596|chr14:74798598-74798599|-/T|frameshift_variant', 'YLPM1|p.V675Cfs*24|1|0.33|ENSG00000119596|chr14:74782066-74782066|G/-|frameshift_variant'] 23313 7786 EVQLVESGG True NCI_RA007_Epitope_Rep4 916.4501760134399 916.44962496793 36.631 1 -0.011741762933746784 0.011226665506287804 0.09118847230936089 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 205 9540 AAFDGGFTVK True NCI_RA007_Epitope_Rep4 1011.5025459394699 1011.50144993586 43.546 2 -0.011773039915714363 0.011226665506287804 0.09123681013392888 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 72006 6522 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39420993586 30.0 2 -0.011778109592955196 0.011226665506287804 0.09124464698774844 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 72012 6265 METAAAVAA True NCI_RA007_Epitope_Rep3 833.3953039896098 833.39475496793 31.645 1 -0.011778752062161826 0.011226665506287804 0.09124564017088387 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 13218 7499 DLSKNFEVVA True NCI_RA007_Epitope_Rep4 1120.57643915572 1120.57534993586 35.49 2 -0.011780693694030422 0.011226665506287804 0.09124864175806104 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 6796 14367 AQELHTFEV True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 60.263 2 -0.011796840316838088 0.01124499738994258 0.09127360581233968 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 28165 8295 FRDQNPEQL True PC9_epitope_Rep2 1145.5465360097699 1145.54542993586 37.269 2 -0.011821027070021726 0.01124499738994258 0.09131101006785504 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 40080 12979 HPVEPVLVTA True PC9_epitope_Rep1 1060.59169529704 1060.5905899358602 54.796 2 -0.011831981912722393 0.01124499738994258 0.09132795521851587 ['nc|ENSG00000196792|Q13033-2|STRN3', 'ENSG00000196792|ENST00000357479|STRN3'] 142703 8004 YYQDTPKQI True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 38.237 2 -0.011838272528502967 0.01124499738994258 0.09133768671162967 ['ENSG00000048162|ENST00000614830|NOP16'] 1018 6541 AEAEAVAVA True H1975_Epitope_Rep2 829.4181476091699 829.4175949679301 30.07 1 -0.011855123652766563 0.01124499738994258 0.09136375894933868 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 54651 12189 KYLPESNTL True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 51.743 2 -0.011859598933189459 0.01124499738994258 0.09137068407773226 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 120197 9833 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.49530993586 42.808 2 -0.011886247351306094 0.01124499738994258 0.09141192837102446 ['ENSG00000162231|ENST00000294172|NXF1'] 98348 6055 SEYIHAQVA True NCI_RA007_Epitope_Rep3 1016.4927095317598 1016.49160993586 30.796 2 -0.011927376751459261 0.01124499738994258 0.09147561225789093 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 64853 11980 LQDPNHLTL True PC9_epitope_Rep6 1049.55055876105 1049.54946993586 57.351 2 -0.011934362607945113 0.01124499738994258 0.09148643227553911 ['ENSG00000188997|ENST00000340067|KCTD21'] 35047 8586 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 38.386 2 -0.012020909843682958 0.01124499738994258 0.09162055931676831 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 6191 19616 APNPVVFVA True PC9_epitope_Rep2 912.5069030439199 912.5063549679301 80.839 1 -0.012023972712466857 0.01124499738994258 0.0916253086820666 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 131030 5103 VTDRSDARLQY True H1975_Epitope_Rep1 1322.6578773638998 1322.6562449037901 24.699 3 -0.0120370639636602 0.01124499738994258 0.09164561037827323 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 119348 15518 VAPEEHPLLL True PC9_epitope_Rep2 1116.6179100448799 1116.6168099358601 64.965 2 -0.01204094349887712 0.01124499738994258 0.0916516273375611 ['ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 37842 9317 GYLPNKQVL True NCI_RA007_Epitope_Rep4 1030.5811306133398 1030.58002993586 42.694 2 -0.012054410748473856 0.01124499738994258 0.0916725166194351 ['nc|ENSG00000131979|P30793-3|GCH1', 'nc|ENSG00000131979|P30793-2|GCH1', 'nc|ENSG00000131979|P30793-4|GCH1', 'ENSG00000131979|ENST00000491895|GCH1'] 28396 15521 FRYPTTEEL True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 64.976 2 -0.012080048255999174 0.011265767725097868 0.0917122931456419 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 34762 18460 GQFGVGFYSA True PC9_epitope_Rep6 1031.4712458111896 1031.4706749679299 83.647 1 -0.012082506922875415 0.011265767725097868 0.09171610843264846 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'ENSG00000126602|ENST00000246957|TRAP1'] 35951 4947 GTTHNFLYK True NCI_RA007_Epitope_Rep5 1079.5399940773498 1079.5388899358602 25.729 2 -0.012093413637629861 0.011265767725097868 0.09173303456970994 ['ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C', 'ENST00000599239.5_1_19:48565437-48599986:-|nuORF'] 35709 6294 GTFGGLGSK True NCI_RA007_Epitope_Rep1 822.42356734278 822.42246993586 28.511 2 -0.012102013767400098 0.011265767725097868 0.09174638274768408 ['ENSG00000124942|ENST00000378024|AHNAK'] 103520 8073 SPRNLAMEA True PC9_epitope_Rep1 987.4807649490699 987.47966993586 35.876 2 -0.012109048858049483 0.011284325875676734 0.09175730291338907 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 24379 6104 FAAEAQKL True H1975_Epitope_Rep2 876.4705175352 876.46942993586 28.456 2 -0.012138604427906891 0.011284325875676734 0.09180319083935928 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 54562 4713 KYISKPENL True NCI_RA007_Epitope_Rep5 1090.60225998074 1090.60116993586 24.813 2 -0.012151172201006772 0.011284325875676734 0.09182270869125357 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 81780 18319 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 75.253 2 -0.012151435565635279 0.011284325875676734 0.09182311773149483 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 45259 4242 IPVEQKEGA True PC9_epitope_Rep3 969.5131106231698 969.51200993586 21.431 2 -0.01216457686080921 0.011284325875676734 0.09184352962159756 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 65269 13345 LQVEEVHQL True PC9_epitope_Rep3 1093.57677350889 1093.57566993586 56.365 2 -0.012167613522267601 0.011284325875676734 0.0918482468339851 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 140303 7890 YRDEFSHQV True PC9_epitope_Rep3 1179.53088594563 1179.52924490379 35.333 3 -0.012199950023269393 0.011284325875676734 0.09189849014823573 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.T1015Pfs*15|1|0.53|ENSG00000109111|chr17:28688125-28688125|G/-|frameshift_variant'] 41468 12014 HYLDTTTLI True NCI_RA007_Epitope_Rep5 1075.55497543515 1075.5538699358601 52.871 2 -0.012209104190051922 0.011284325875676734 0.09191271726495405 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 66199 9690 LSERYAELY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 42.294 2 -0.012217396137149221 0.011284325875676734 0.09192560575467859 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 5865 14000 APGALLLE True NCI_RA007_Epitope_Rep5 782.4538048419 782.4532549679301 60.536 1 -0.01226237591811717 0.011284325875676734 0.09199554286146056 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 38644 18826 HFLDRHLVF True PC9_epitope_Rep5 1182.62981214126 1182.6281549037901 77.429 3 -0.012296915200646377 0.011284325875676734 0.09204927322114163 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 90774 10137 RESDKMWLV True H1975_Epitope_Rep2 1162.58047899034 1162.57882490379 43.991 3 -0.012312141608459903 0.011284325875676734 0.09207296726055225 ['ENSG00000180104|ENST00000512944|EXOC3'] 49151 2610 KELEKTYSA True NCI_RA007_Epitope_Rep3 1067.54989005471 1067.5487899358602 14.735 2 -0.012312581410571148 0.011284325875676734 0.09207365171022208 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 48045 23367 IYLPYLQNW True PC9_epitope_Rep5 1208.6229954253201 1208.62247496793 94.865 1 -0.012320265144300785 0.011304102084737288 0.0920856102618496 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 72783 18481 MPAGSFITA True PC9_epitope_Rep5 893.43168949833 893.4311449679301 76.108 1 -0.012325088358856656 0.011304102084737288 0.09209311744189572 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 6726 13199 AQAPGVITGV True PC9_epitope_Rep6 911.5076313199099 911.50652993586 62.417 2 -0.012344177826646886 0.011304102084737288 0.09212283403535941 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 89580 4523 QYNPHVHQL True PC9_epitope_Rep4 1134.55704112382 1134.55540490379 23.886 3 -0.012355909345339562 0.011304102084737288 0.092141100022438 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 24755 12278 FASEVSNVL True NCI_RA007_Epitope_Rep3 964.48656152216 964.48546993586 55.457 2 -0.012357397402350354 0.011304102084737288 0.09214341712031489 ['ENSG00000136738|ENST00000377524|STAM', 'nc|ENSG00000136738|Q92783-2|STAM'] 6304 6955 APRLQSEVA True PC9_epitope_Rep3 969.5243440132099 969.52324993586 31.765 2 -0.012377600304645723 0.011304102084737288 0.09217487992788477 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 88757 20707 QTPEFFQDV True PC9_epitope_Rep2 1109.5029398622898 1109.50184993586 85.085 2 -0.01239329405344963 0.011304102084737288 0.09219932593154069 ['ENSG00000169710|ENST00000306749|FASN'] 119060 10347 VAGGAVYL True H1975_Epitope_Rep3 748.4119400299201 748.41139496793 44.854 1 -0.012395535791816986 0.011304102084737288 0.09220281825766206 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 59231 8409 LFERLTLKHD True NCI_RA007_Epitope_Rep4 1270.70337100434 1270.70173490379 39.159 3 -0.01241847977147304 0.011325348346846944 0.09223856751191535 ['ENSG00000087086|ENST00000331825|FTL'] 34977 22088 GQSELTLLL True PC9_epitope_Rep2 972.54916177872 972.54861496793 90.434 1 -0.01241979650002732 0.011325348346846944 0.09224061943152974 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 87452 13983 QQAALLLA True NCI_RA007_Epitope_Rep4 826.4912529797799 826.49070496793 61.057 1 -0.012442372915037933 0.011343880389429763 0.09227580656737593 ['ENSG00000152382|ENST00000367874|TADA1'] 71408 21296 LYSSEQLLI True PC9_epitope_Rep1 1064.57537652656 1064.57426993586 86.743 2 -0.012443745443129416 0.011343880389429763 0.0922779460815714 ['ENSG00000168209|ENST00000307365|DDIT4'] 126909 13787 VLQSALAAIR True PC9_epitope_Rep4 1040.6342288153598 1040.63312993586 60.927 2 -0.01244532523373417 0.011343880389429763 0.09228040872463014 ['ENSG00000143621|ENST00000361891|ILF2'] 108830 18320 SYVQVTSNF True PC9_epitope_Rep1 1043.49237517859 1043.49187496793 75.257 1 -0.012456935698300997 0.011343880389429763 0.0922985090896226 ['ENSG00000072364|ENST00000265343|AFF4'] 93006 8752 RPKPSSSPVIF True PC9_epitope_Rep4 1213.68190728377 1213.68025490379 41.17 3 -0.012465572800256309 0.011343880389429763 0.09231197577522135 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 138360 13462 YHFSSSEL True PC9_epitope_Rep1 968.4239612655999 968.42286993586 56.639 2 -0.012467635792669868 0.011343880389429763 0.0923151925402408 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 70997 19082 LYIGHLTTL True PC9_epitope_Rep2 1029.58588164061 1029.58478993586 78.763 2 -0.01249447045445655 0.011343880389429763 0.0923570426144921 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'ENST00000542302.6_1_12:1519571-1599393:+|nuORF'] 76628 18863 NQQLPIESQMV True PC9_epitope_Rep4 1285.63363676201 1285.63252993586 80.644 2 -0.012497167108557168 0.011343880389429763 0.09236124896499764 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 111175 9627 THGPPVQL True PC9_epitope_Rep5 847.45520182423 847.45410993586 41.995 2 -0.012497815093517821 0.011343880389429763 0.09236225973935143 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 84459 6101 QAIADEQKK True NCI_RA007_Epitope_Rep5 1029.54547338061 1029.54436993586 30.149 2 -0.012503449177805374 0.011343880389429763 0.09237104854108973 ['ENST00000575500.5_2_17:78178032-78182141:+|nuORF', 'ENSG00000141527|ENST00000648509|CARD14'] 58421 13698 LENYSEEDPLY True H1975_Epitope_Rep2 1370.58779168506 1370.58668993586 57.833 2 -0.01251053404061959 0.011343880389429763 0.0923821013400652 ['RGPD4|p.G760E|1|0.15|ENSG00000196862|chr2:107862755-107862755|G/A|missense_variant'] 134098 18581 VYKTIMEQF True PC9_epitope_Rep3 1157.57908200801 1157.5779899358602 76.698 2 -0.012524850125694436 0.011343880389429763 0.09240443825239023 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 118420 14662 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47107496793 61.4 1 -0.012538190173604696 0.011343880389429763 0.09242525588111475 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 1460 7733 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40140993586 34.729 2 -0.012567582206246973 0.011363636363636364 0.09247113545330954 ['ENSG00000173545|ENST00000308683|ZNF622'] 118124 9194 TYIEASGKSL True PC9_epitope_Rep4 1067.54989005471 1067.5487899358602 42.961 2 -0.012572316665293574 0.011363636363636364 0.09247852729439351 ['ENSG00000102575|ENST00000648477|ACP5', 'ENST00000590420.1_1_19:11685827-11688432:-|nuORF'] 73468 13974 MVAPVTGNDV True PC9_epitope_Rep3 1001.48518162317 1001.48408993586 58.824 2 -0.012620266468148317 0.011363636363636364 0.09255341523564951 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 109726 3661 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 19.034 2 -0.012625010400586877 0.011363636363636364 0.09256082673986525 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 9717 16230 AYGNVFSAF True NCI_RA007_Epitope_Rep3 974.4497820906199 974.44923496793 71.529 1 -0.012647600238542769 0.011363636363636364 0.09259612514178464 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 9897 17110 AYLKGTVLF True PC9_epitope_Rep6 1010.5800679841799 1010.57896993586 78.39 2 -0.012648216573469337 0.011363636363636364 0.09259708835310787 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 28299 10123 FRQQRPLEF True PC9_epitope_Rep4 1219.6461904813898 1219.64455490379 46.612 3 -0.012672954057404972 0.011363636363636364 0.09263575433208517 ['ENSG00000089693|ENST00000203630|MLF2'] 103602 5433 SPSTVIHGA True PC9_epitope_Rep5 867.4450310633498 867.44392993586 25.908 2 -0.012697755745876874 0.011363636363636364 0.09267453264549909 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 1249 12373 AEDFTIFKA True H1975_Epitope_Rep3 1040.5178616504397 1040.51676993586 52.779 2 -0.012745149685136873 0.011384869421631251 0.09274866810432514 ['ENSG00000163001|ENST00000349456|CFAP36', 'nc|ENSG00000163001|Q96G28-2|CFAP36'] 126771 16976 VLPGVDALSNI True NCI_RA007_Epitope_Rep2 1096.61282466444 1096.61227496793 70.769 1 -0.012749517314629349 0.011384869421631251 0.0927555023264861 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 76999 7256 NRGPAYGL True PC9_epitope_Rep4 846.4348007328199 846.43370993586 35.219 2 -0.012818979857934539 0.011422366992399565 0.09286424344971408 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'ENST00000592923.5_1_19:11649661-11650145:+|nuORF', 'ENST00000588468.1_1_19:11649742-11652758:+|nuORF', 'ENSG00000130176|ENST00000252456|CNN1'] 119621 9875 VATVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 42.842 2 -0.012819402458754282 0.011422366992399565 0.09286490530426386 ['CON__P00761'] 40442 17443 HRAPVVAIAVL True PC9_epitope_Rep5 1144.7080624619598 1144.7069699358601 72.094 2 -0.012850224547362628 0.011422366992399565 0.09291318658846197 ['ENSG00000131899|ENST00000316843|LLGL1'] 120740 4194 VEKPVGVAA True H1975_Epitope_Rep3 868.5018176634799 868.50072993586 21.25 2 -0.012857216123466055 0.011422366992399565 0.09292414112774254 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'ENST00000562659.1_1_16:85698640-85699994:+|nuORF'] 141808 10830 YVDDGLIS True H1975_Epitope_Rep3 880.4178132559999 880.41726496793 46.737 1 -0.012868596611562142 0.011422366992399565 0.09294197434105778 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 92283 19324 RLLDLENIQI True PC9_epitope_Rep6 1225.70303665117 1225.70192993586 86.979 2 -0.012873069804238692 0.011422366992399565 0.09294898452146345 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 89247 18720 QVVGGIYGV True PC9_epitope_Rep5 890.4861675993399 890.48506993586 77.024 2 -0.012884644012613663 0.011422366992399565 0.09296712489732725 ['ENSG00000167658|ENST00000309311|EEF2'] 49292 8122 KEQVPGFTP True H1975_Epitope_Rep3 1001.5181960036098 1001.51708993586 36.218 2 -0.012885999972541234 0.011422366992399565 0.09296925027837052 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 32167 14005 GEVLMVQV True NCI_RA007_Epitope_Rep4 873.4629896266098 873.46188993586 61.144 2 -0.012900153440544682 0.011422366992399565 0.09299143708255778 ['ENSG00000120948|ENST00000240185|TARDBP'] 61501 2696 LKEEEEDKKR True NCI_RA007_Epitope_Rep2 1302.6779441021397 1302.67630490379 14.713 3 -0.012901992316223439 0.011422366992399565 0.09299431996869524 ['ENSG00000179218|ENST00000316448|CALR'] 77941 19823 NVLDHFSEL True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 81.639 2 -0.01290373445389905 0.011422366992399565 0.0929970512553045 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 31105 15445 GAVHTVIFAG True PC9_epitope_Rep4 970.5236157372199 970.52250993586 67.342 2 -0.012904629021719924 0.011422366992399565 0.09299845376283812 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 90843 4871 REVDAEYEA True NCI_RA007_Epitope_Rep4 1080.4723680099999 1080.4712699358602 25.184 2 -0.012953033019982482 0.011422366992399565 0.09307436506413995 ['nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 63059 13300 LLQESLAQA True PC9_epitope_Rep6 971.52876068731 971.52766993586 62.814 2 -0.012973328261269415 0.011422366992399565 0.09310620741206381 ['ENSG00000168209|ENST00000307365|DDIT4'] 5706 20185 APALLLIPA True PC9_epitope_Rep6 877.56368964405 877.56258993586 90.315 2 -0.012985104966011797 0.011422366992399565 0.09312468823520036 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 24514 20105 FAFESDLHSL True PC9_epitope_Rep2 1164.54513902744 1164.5440499358601 82.742 2 -0.012999185544744347 0.011422366992399565 0.09314678801205664 ['ENST00000488829.1_1_9:89626569-89628063:+|nuORF', 'ENSG00000117399|ENST00000310955|CDC20'] 106511 18375 STLPDVTEV True PC9_epitope_Rep3 959.48114178855 959.4805949679301 75.889 1 -0.013016294049892702 0.011422366992399565 0.09317364539568834 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 121324 9160 VEVDAAVTP True H1975_Epitope_Rep1 899.4600124211499 899.4594649679301 40.141 1 -0.013026451507357796 0.011422366992399565 0.09318959354517585 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 132555 5969 VVEDKVEGY True H1975_Epitope_Rep3 1036.5076908895599 1036.5065899358601 27.971 2 -0.01302935661731709 0.011422366992399565 0.09319415520757557 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF'] 111590 22308 TIDDIVLTI True PC9_epitope_Rep5 1001.56447748969 1001.56338993586 90.815 2 -0.01303365792467679 0.011422366992399565 0.09320090951004954 ['ENSG00000188782|ENST00000456354|CATSPER4', 'nc|ENSG00000188782|Q7RTX7-2|CATSPER4'] 22442 6817 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54316490379 31.14 3 -0.013044790281913859 0.011422366992399565 0.09321839222366331 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 134411 17732 VYPGYYLTF True NCI_RA007_Epitope_Rep4 1121.54334812229 1121.5422499358601 76.747 2 -0.013052487817943485 0.011422366992399565 0.09323048216763724 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 133823 14808 VYGDFQEAF True NCI_RA007_Epitope_Rep5 1074.4658260775798 1074.46472993586 63.631 2 -0.013075635282740276 0.011422366992399565 0.09326684513174266 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A'] 77886 8592 NVHTGELAAV True PC9_epitope_Rep2 1009.51925863277 1009.51816993586 38.411 2 -0.013085241720216403 0.011422366992399565 0.09328193921129033 ['ENSG00000012983|ENST00000682126|MAP4K5'] 47995 14465 IYKQDLPSL True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 63.551 2 -0.013104387882616314 0.011442094750097703 0.09331202792551088 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 23761 20857 EYGNIIVTL True PC9_epitope_Rep4 1020.54916177872 1020.5485749679301 88.38 1 -0.013123004834710312 0.011442094750097703 0.09334129183864481 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 659 7461 AATGGGIVRV True PC9_epitope_Rep4 899.51886470995 899.51776993586 36.054 2 -0.013160000077378818 0.011442094750097703 0.09339946461262862 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 8945 12790 AVFVRGVGV True PC9_epitope_Rep4 902.5337864980997 902.53268993586 57.06 2 -0.013164966883735989 0.011442094750097703 0.09340727665043125 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 45427 8514 IQHPSNVL True PC9_epitope_Rep3 906.49231560894 906.49120993586 37.708 2 -0.013165424895534858 0.011442094750097703 0.09340799705823541 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 28763 12078 FSSSAGPGL True PC9_epitope_Rep2 821.3919328613299 821.39082993586 51.77 2 -0.01316597266441555 0.011442094750097703 0.09340885865054148 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 48204 21107 IYPTTYVQF True PC9_epitope_Rep5 1130.56481184286 1130.56427496793 86.253 1 -0.013166605377491132 0.011442094750097703 0.09340985385989821 ['ENSG00000179820|ENST00000391770|MYADM'] 77315 10410 NSDPNLHLL True NCI_RA007_Epitope_Rep5 1021.5192586327701 1021.51816993586 46.671 2 -0.013178091085994832 0.011442094750097703 0.09342792136236064 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 127406 21104 VNEQLYIL True PC9_epitope_Rep2 990.5385970950199 990.53750993586 86.635 2 -0.013201698392655047 0.011463059855409132 0.0934650647434915 ['ENSG00000115616|ENST00000233969|SLC9A2'] 72908 12800 MPTTLEGA True PC9_epitope_Rep1 818.3844049527399 818.38385496793 54.109 1 -0.013205955244171555 0.011463059855409132 0.09347176356869627 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 78084 13609 NVVNRLTSV True PC9_epitope_Rep3 1000.56654317836 1000.56544993586 57.411 2 -0.013207871210964079 0.011463059855409132 0.09347477875928471 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 13960 14073 DRDGGFVL True PC9_epitope_Rep6 877.4293809992099 877.42828993586 66.003 2 -0.013227243333242676 0.011484022229940952 0.09350526903849037 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 89417 17695 QYASLMHSF True PC9_epitope_Rep3 1082.48551597634 1082.4844099358602 73.261 2 -0.013230621639181667 0.011484022229940952 0.09351058699182412 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 99412 3739 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 20.526 2 -0.013255755643721072 0.011484022229940952 0.09355015863732462 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 48252 14542 IYQKPFQTL True PC9_epitope_Rep5 1136.62299542532 1136.62188993586 60.934 2 -0.013260490284605084 0.011501486512879494 0.0935576143641296 ['ATL2|p.K522Sfs*8|1|0.1|ENSG00000119787|chr2:38298199-38298211|TCCCCAGAGTATT/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 79264 8872 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 39.481 2 -0.013267746002808523 0.011501486512879494 0.09356904092851719 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 17463 12453 EHFDASHVAL True PC9_epitope_Rep3 1124.5250722892 1124.52343490379 52.924 3 -0.013270733642502367 0.011501486512879494 0.09357374626944412 ['ENSG00000164062|ENST00000296456|APEH'] 45578 13531 IQTAVRLLL True NCI_RA007_Epitope_Rep4 1025.6597152872098 1025.65860993586 59.255 2 -0.013284522338115704 0.011501486512879494 0.09359546484200826 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'HIST1H2BD|p.G105R|1|0.42|ENSG00000158373|chr6:26158482-26158482|G/C|missense_variant', 'HIST1H2BJ|p.R93T|1|0.32|ENSG00000124635|chr6:27132473-27132473|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 111584 21783 TIDDGIFEV True PC9_epitope_Rep3 1007.48114178855 1007.48004993586 89.087 2 -0.01329676884754338 0.011501486512879494 0.09361475743414634 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 39957 11904 HPKYSDMIVA True PC9_epitope_Rep5 1159.56957995347 1159.56848993586 50.785 2 -0.013308203004342704 0.011501486512879494 0.09363277293005676 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 6781 15477 AQDPTAFSV True PC9_epitope_Rep4 934.4396113297399 934.43850993586 67.46 2 -0.013333709101044637 0.011501486512879494 0.09367296918727668 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 140032 4277 YQEHPDLAR True NCI_RA007_Epitope_Rep2 1127.5359713260698 1127.53432490379 21.276 3 -0.01333477069724425 0.011501486512879494 0.09367464248240716 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 114515 12250 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 51.98 2 -0.01335279386104037 0.011501486512879494 0.09370305407868518 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 9698 11418 AYGHFGRDSF True PC9_epitope_Rep5 1155.50975657823 1155.50812490379 48.919 3 -0.013407889900194586 0.011501486512879494 0.09378994650541692 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000477975.2_1_3:112415757-112416508:-|nuORF'] 38861 3951 HHDNTYTV True PC9_epitope_Rep5 985.42535824793 985.42426993586 20.278 2 -0.013409692332156309 0.011501486512879494 0.093792790139002 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 34717 6587 GQEDHYNNL True PC9_epitope_Rep1 1088.45230127176 1088.4517749679299 30.142 1 -0.013415758390373794 0.011501486512879494 0.09380236081278674 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 32077 6080 GESNRLLSA True NCI_RA007_Epitope_Rep4 945.4879585044899 945.48686993586 30.003 2 -0.01342418619369883 0.011501486512879494 0.09381565890537139 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 79279 7489 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 38.055 2 -0.013432050879395674 0.011501486512879494 0.09382806971721243 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 87437 14015 QPYMPTVSA True PC9_epitope_Rep6 992.4637179025999 992.46262993586 65.763 2 -0.01347460117382081 0.011501486512879494 0.09389523689364411 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 80385 6679 PGHLQEGFG True PC9_epitope_Rep6 940.4402800360799 940.43918993586 34.44 2 -0.013485284703102353 0.011501486512879494 0.09391210679421222 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 95938 13278 RYLEKPMEI True PC9_epitope_Rep3 1177.6165301458898 1177.6154299358602 56.108 2 -0.01352182661552594 0.011501486512879494 0.09396982543745198 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 121965 18851 VFTNSSWLW True NCI_RA007_Epitope_Rep4 1138.54474510462 1138.54364993586 81.535 2 -0.013562078639927413 0.01151918779963989 0.09403343452028574 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 133441 7757 VVWQRRHAR True PC9_epitope_Rep6 1206.68464167878 1206.6829949037901 39.198 3 -0.013567034415992028 0.01151918779963989 0.09404126817906737 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 409 19562 AALGPGVLAV True PC9_epitope_Rep2 866.5225531080599 866.52144993586 80.627 2 -0.013581474029504447 0.01151918779963989 0.09406409580235316 ['ENSG00000275183|ENST00000611161|LENG9', 'nc|ENSG00000275183|Q96B70|LENG9'] 131764 21535 VTPQSLFILFG True H1975_Epitope_Rep3 1220.6805103014397 1220.6794099358601 89.988 2 -0.013599320517632645 0.01151918779963989 0.09409231500236598 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 100348 11228 SKPPVISL True PC9_epitope_Rep6 839.51165407119 839.51054993586 54.186 2 -0.013610554973954981 0.01151918779963989 0.09411008233223933 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 77303 10507 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.45996993586 45.369 2 -0.013616899105445017 0.01151918779963989 0.09412011668885054 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 112792 24125 TLIEDILGV True PC9_epitope_Rep1 971.5539128059899 971.5533649679301 97.61 1 -0.013643962495140141 0.01151918779963989 0.09416293103692334 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 5735 20589 APAPVFFVT True PC9_epitope_Rep4 947.5116540711899 947.51054993586 87.348 2 -0.013650444219340046 0.01151918779963989 0.09417318726893688 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'ABCC3|p.E507Sfs*5|1|0.28|ENSG00000108846|chr17:50667639-50667639|G/-|frameshift_variant', 'nc|ENSG00000108846|O15438-3|ABCC3'] 65589 15055 LRVGEPVAL True PC9_epitope_Rep2 952.5705659296398 952.56946993586 63.167 2 -0.013660851700164636 0.01151918779963989 0.0941896570675954 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 127727 13236 VPAPSPLSA True PC9_epitope_Rep3 837.45961849833 837.45852993586 55.946 2 -0.0136798652842169 0.01151918779963989 0.0942197514688279 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 100299 11022 SKFPTQISL True NCI_RA007_Epitope_Rep3 1019.5651461960299 1019.56404993586 50.448 2 -0.01368675567304187 0.01151918779963989 0.09423065921535263 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 32598 11717 GGHGPSFPL True PC9_epitope_Rep6 867.42390169595 867.42280993586 56.216 2 -0.013687517826920365 0.01151918779963989 0.09423186579092362 ['ENSG00000079246|ENST00000392132|XRCC5'] 87574 11715 QQLGTAVEL True NCI_RA007_Epitope_Rep5 957.5131106231698 957.51200993586 51.716 2 -0.013688826839451268 0.01151918779963989 0.09423393813198208 ['ENSG00000138594|ENST00000308580|TMOD3'] 10192 18977 AYYPAQGVQQF True PC9_epitope_Rep3 1270.59823722946 1270.5971499358602 78.217 2 -0.013734070678773715 0.01151918779963989 0.09430558577680476 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 39543 6669 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 34.391 2 -0.013734505774445299 0.01151918779963989 0.09430627498414806 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 99846 19131 SILGKFAVV True PC9_epitope_Rep4 932.5695033004798 932.56840993586 81.68 2 -0.013785905106110252 0.01151918779963989 0.0943877194871174 ['ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 78545 10851 NYQGHFHLF True NCI_RA007_Epitope_Rep4 1161.5355774032498 1161.53392490379 48.588 3 -0.013795376954754057 0.011540380485476908 0.09440273369576674 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 2464 15976 AEQLMTLISA True H1975_Epitope_Rep3 1075.55834656343 1075.5577749679298 66.909 1 -0.01381292065316205 0.011540380485476908 0.09443054756151212 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 24686 21751 FALPYVIVL True H1975_Epitope_Rep2 1033.6212045201698 1033.62010993586 89.972 2 -0.013841820200791007 0.01156182212581345 0.0944763781961179 ['nc|ENSG00000163607|Q8N3Z3-2|GTPBP8', 'ENSG00000163607|ENST00000383678|GTPBP8'] 88369 20356 QSLAGGIIGV True PC9_epitope_Rep2 913.5232813840499 913.5227349679301 83.722 1 -0.013883762636168017 0.011574977240213292 0.09454292213748909 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 60 12707 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44794993586 53.934 2 -0.013888059286096398 0.011574977240213292 0.0945497409517712 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 142243 13468 YWQNHPEL True PC9_epitope_Rep1 1085.4930438849299 1085.49194993586 56.662 2 -0.013892121090334462 0.011574977240213292 0.0945561873969718 ['ENSG00000119203|ENST00000238112|CPSF3'] 73447 12381 M[Oxidation]VAPAVASV True PC9_epitope_Rep3 859.4473399429099 859.44624993586 52.652 2 -0.013904790759277056 0.011574977240213292 0.09457629736784326 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 134356 10610 VYPEKLATKF True PC9_epitope_Rep4 1194.6648602372995 1194.66376993586 48.56 2 -0.013968613570402267 0.011574977240213292 0.09467764817049262 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 74247 10419 NEIEPNFSA True H1975_Epitope_Rep1 1019.45598966987 1019.45488993586 45.028 2 -0.013970418513880568 0.011574977240213292 0.09468051558692735 ['nc|ENSG00000242498|Q7Z6K5-2|ARPIN', 'ENSG00000242498|ENST00000357484|ARPIN'] 27737 13891 FPRPVTVEP True PC9_epitope_Rep5 1040.5654805492 1040.5643899358602 58.452 2 -0.013974262715839783 0.011574977240213292 0.09468662287630829 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 21400 5721 ERIMKAQAL True PC9_epitope_Rep4 1058.5906497512199 1058.58954993586 28.827 2 -0.014011618695188473 0.011574977240213292 0.09474598546532481 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 45475 19961 IQLPSVNTV True PC9_epitope_Rep3 969.54949613189 969.54838993586 82.025 2 -0.014011706896402885 0.011574977240213292 0.09474612565873256 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292'] 49791 2678 KHGGPKDEER True NCI_RA007_Epitope_Rep2 1151.5683340835099 1151.56669490379 14.637 3 -0.014013455326170177 0.011574977240213292 0.09474890477131175 ['ENSG00000142168|ENST00000270142|SOD1'] 37113 14847 GVPTKVFNV True PC9_epitope_Rep1 959.5440168286299 959.54290993586 61.928 2 -0.014031232128561005 0.011574977240213292 0.09477716423395349 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 2912 7698 AEYINEAAA True H1975_Epitope_Rep2 950.4345259492999 950.43342993586 34.565 2 -0.01408090857721038 0.011574977240213292 0.09485616684871712 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 23211 21769 EVLVIANSGL True PC9_epitope_Rep1 1013.5757108797299 1013.5746099358599 88.569 2 -0.01409456301246484 0.011574977240213292 0.09487789057119167 ['nc|ENSG00000182652|Q8NH05|OR4Q3', 'ENSG00000182652|ENST00000642117|OR4Q3'] 49033 6128 KEFTEAVEA True NCI_RA007_Epitope_Rep3 1022.4920408254197 1022.4909499358599 31.092 2 -0.014094622039844004 0.011574977240213292 0.09487798448959886 ['ENSG00000167085|ENST00000300408|PHB1'] 25664 7346 FEQEMATAA True NCI_RA007_Epitope_Rep3 996.4222470134398 996.42114993586 36.019 2 -0.014111385009037128 0.011574977240213292 0.09490465879991113 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 54903 11605 KYPNVFKKI True PC9_epitope_Rep3 1135.67536535135 1135.67371490379 49.654 3 -0.014122686535483818 0.011574977240213292 0.09492264562379275 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 41372 5984 HYAHLIKTF True NCI_RA007_Epitope_Rep3 1128.6080140675201 1128.60637490379 30.518 3 -0.014128821457801373 0.011574977240213292 0.0949324106432912 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1', 'ENST00000495574.1_1_10:129046289-129055694:+|nuORF', 'ENST00000484400.5_1_10:129046280-129142589:+|nuORF'] 12084 9846 DHVQTVSL True PC9_epitope_Rep2 897.45559574705 897.45448993586 43.207 2 -0.014171015136107553 0.011574977240213292 0.0949995907631675 ['nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1', 'ENSG00000101391|ENST00000346416|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6|CDK5RAP1', 'ENST00000482967.5_1_20:31946851-31989286:-|nuORF', 'ENST00000461710.5_1_20:31948117-31960625:-|nuORF'] 114092 12633 TPFTAIREA True PC9_epitope_Rep5 1004.5290950404798 1004.52798993586 53.595 2 -0.014206666417903817 0.011574977240213292 0.09505638140962795 ['nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14'] 7067 19147 AQQVILVQV True PC9_epitope_Rep4 996.5967806774798 996.59568993586 81.744 2 -0.014213580349375646 0.011574977240213292 0.09506739783227158 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF', 'nc|ENSG00000075420|Q53EP0-3|FNDC3B'] 35631 7981 GTDESKFNAV True PC9_epitope_Rep5 1066.49310345458 1066.49200993586 35.638 2 -0.014259565000805854 0.011574977240213292 0.09514069207934328 ['ENSG00000122359|ENST00000422982|ANXA11', 'nc|ENSG00000122359|P50995-2|ANXA11'] 32134 6079 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40140993586 28.36 2 -0.014265958085647169 0.011574977240213292 0.09515088520786602 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 139408 21294 YLPDSLTQL True PC9_epitope_Rep1 1048.54407639828 1048.54357496793 86.735 1 -0.01427240430415744 0.011574977240213292 0.095161163865003 ['ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 78224 20678 NYGDYFNVF True PC9_epitope_Rep6 1137.47672511445 1137.47562993586 92.298 2 -0.014289884614242694 0.011574977240213292 0.09518904076322103 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 78852 19539 PAEPAFLA True PC9_epitope_Rep3 814.4225047136199 814.42140993586 80.389 2 -0.014293495119217722 0.011574977240213292 0.09519479939936794 ['ENSG00000163807|ENST00000296121|KIAA1143'] 77891 21548 NVIDNLIVA True PC9_epitope_Rep5 969.5494961318899 969.54838993586 87.922 2 -0.014295830553380868 0.011574977240213292 0.09519852447600716 ['ENSG00000143621|ENST00000361891|ILF2'] 102963 9716 SPFAEGTSA True PC9_epitope_Rep3 865.38176210045 865.3806699358599 42.326 2 -0.014329493269489433 0.011574977240213292 0.09525222925651833 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 32183 5464 GEVTNVTTA True H1975_Epitope_Rep2 890.4345259493 890.43342993586 26.044 2 -0.01434471271004361 0.011574977240213292 0.09527651733158708 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 6321 5265 APRPPVSAA True PC9_epitope_Rep1 864.4817509252399 864.48064993586 25.098 2 -0.0143786189087093 0.011574977240213292 0.09533064318438858 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2'] 97880 9102 SELRSVLV True H1975_Epitope_Rep3 901.5232813840499 901.52218993586 39.999 2 -0.01440414499080071 0.011574977240213292 0.09537140641077103 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1', 'ENST00000575981.1_1_16:3022956-3024767:-|nuORF'] 127859 11938 VPFQNAATA True PC9_epitope_Rep5 917.4606811274898 917.45958993586 50.917 2 -0.01440867933787561 0.011574977240213292 0.09537864875933157 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 54424 13291 KYFLWEEKF True NCI_RA007_Epitope_Rep4 1288.6492101731599 1288.64810993586 58.263 2 -0.014418878090203787 0.011574977240213292 0.09539493988331246 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 15016 16141 DYKNTFPKW True PC9_epitope_Rep5 1197.5818588893299 1197.5807699358602 67.074 2 -0.014449002879274194 0.011574977240213292 0.09544307207950324 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1'] 136280 18826 WSEITELLY True H1975_Epitope_Rep2 1152.5702911461199 1152.56918993586 78.168 2 -0.014450200211022089 0.011574977240213292 0.09544498549714997 ['ENSG00000138095|ENST00000260665|LRPPRC'] 11903 15268 DHLETIQQL True PC9_epitope_Rep5 1095.55603806431 1095.5549499358601 63.738 2 -0.014476645937045979 0.011591376882244611 0.09548725474846366 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000497765.1_1_3:183515808-183519351:+|nuORF'] 26289 10188 FHGPGEAL True PC9_epitope_Rep1 826.3973525949399 826.3962499358599 44.067 2 -0.014498164713879038 0.011591376882244611 0.0955216592006786 ['ENSG00000277150|ENST00000622749|F8A3'] 117032 7079 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 34.495 2 -0.014508434284350509 0.011591376882244611 0.09553808150764753 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 41496 16117 HYMPPPYASL True PC9_epitope_Rep2 1174.5481162328997 1174.5470099358602 67.252 2 -0.014518130967318868 0.011591376882244611 0.09555358959909117 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 3109 15204 AGAGPLVGV True PC9_epitope_Rep2 739.42283906679 739.42229496793 63.745 1 -0.014518235879911568 0.011591376882244611 0.0955537573979201 ['ENSG00000180921|ENST00000388913|FAM83H'] 23589 18743 EWASRFWLW True NCI_RA007_Epitope_Rep3 1279.61382772395 1279.6127299358602 81.955 2 -0.014530198043077678 0.011591376882244611 0.09557289128555997 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 2765 5670 AETPGTVSP True H1975_Epitope_Rep2 857.41306222873 857.4125149679301 26.807 1 -0.014552941791129183 0.011591376882244611 0.09560927844135167 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 88988 20039 QVIPQFQTV True PC9_epitope_Rep5 1058.5760452328998 1058.57547496793 82.133 1 -0.014608791179416507 0.011591376882244611 0.09569867361914448 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 87506 4905 QQHDVQEL True PC9_epitope_Rep4 995.46722305991 995.46612993586 25.462 2 -0.014632340723278304 0.011591376882244611 0.09573638651165926 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 111406 7185 THSLETQEL True PC9_epitope_Rep6 1056.5087535187201 1056.5076499358602 36.72 2 -0.014636008144757245 0.011591376882244611 0.09574226060320615 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 77986 16804 NVPDSFNEV True PC9_epitope_Rep5 1019.45598966987 1019.45488993586 69.644 2 -0.014658991274881879 0.011591376882244611 0.09577907859430192 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 141107 6875 YSQNQQSY True PC9_epitope_Rep5 1016.4199385143199 1016.41884993586 31.415 2 -0.014666574916363383 0.011591376882244611 0.09579122954218781 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 53980 7849 KVADGFKVV True PC9_epitope_Rep6 961.5596668927699 961.55856993586 39.59 2 -0.014683130149123529 0.011591376882244611 0.09581775921982104 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 73070 14923 MRDPTFVRL True PC9_epitope_Rep5 1133.60154878809 1133.60044993586 62.406 2 -0.014712883664300557 0.011591376882244611 0.09586545262525047 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 54561 4627 KYISKPENL True NCI_RA007_Epitope_Rep5 1090.60225998074 1090.60116993586 24.474 2 -0.014719836345348883 0.011591376882244611 0.095876599936503 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 38183 5702 HDPSAVAV True PC9_epitope_Rep3 794.3922672145001 794.39116993586 27.005 2 -0.014735193441960276 0.011591376882244611 0.09590122551004605 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 95115 5233 RVEEAIHPV True PC9_epitope_Rep4 1048.56654317836 1048.5654499358602 26.828 2 -0.014794443910814428 0.011591376882244611 0.09599627891782386 ['ENST00000367590.8_1_1:180601192-180601402:+|nuORF'] 117937 21483 TWTEVSYTF True PC9_epitope_Rep5 1132.5076908895599 1132.5065899358601 87.668 2 -0.014800088103600924 0.011591376882244611 0.0960053372967275 ['ENSG00000116663|ENST00000376753|FBXO6'] 131289 13541 VTGAVVTAV True PC9_epitope_Rep2 815.47526856247 815.47472496793 57.378 1 -0.014808176177706866 0.011591376882244611 0.096018318959223 ['ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 6594 14192 APVPGIPTA True PC9_epitope_Rep6 821.46470387877 821.46360993586 66.473 2 -0.014818998775031334 0.011591376882244611 0.0960356916472076 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 85991 12241 QHLLDTNQL True PC9_epitope_Rep4 1080.5563724174801 1080.55526993586 54.902 2 -0.014819472797560638 0.011591376882244611 0.09603645261200239 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 120362 5776 VEEGAPPPP True H1975_Epitope_Rep3 891.4337976733099 891.43270993586 27.243 2 -0.014843298957787071 0.011611282006845457 0.09607470726811619 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 47243 14302 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.4580849679301 59.838 1 -0.014879476242112496 0.011611282006845457 0.09613281391932937 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 100910 23104 SLFAFSLSV True PC9_epitope_Rep4 969.51713337445 969.51602993586 97.088 2 -0.01495761839216029 0.011611282006845457 0.09625841092344592 ['ENST00000507678.5_1_4:177241188-177241371:+|nuORF', 'ENST00000513139.1_1_4:177241188-177248429:+|nuORF', 'ENSG00000129128|ENST00000503362|SPCS3'] 90523 8655 RELVKNWVP True H1975_Epitope_Rep1 1139.64512785223 1139.64349490379 38.22 3 -0.01496464090756866 0.011611282006845457 0.096269704019515 ['ENSG00000127540|ENST00000591899|UQCR11'] 138326 13767 YHDYGHLEL True PC9_epitope_Rep1 1145.51417325233 1145.51251490379 57.799 3 -0.014978457173595678 0.011611282006845457 0.0962919251625419 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 110224 2762 TEQQQRFHEI True H1975_Epitope_Rep2 1314.6316626160599 1314.63001490379 14.652 3 -0.01498761893686862 0.011611282006845457 0.09630666239180968 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 40061 7931 HPTWALKEA True PC9_epitope_Rep2 1051.5450794577898 1051.54398993586 35.871 2 -0.014992266077679308 0.011611282006845457 0.0963141382198194 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 103660 9037 SPVDYGTSA True PC9_epitope_Rep3 895.39232678415 895.39122993586 39.703 2 -0.015019016078351325 0.011626899926384618 0.09635717905534724 ['ENSG00000149658|ENST00000370339|YTHDF1'] 74186 9125 NEEMSGLPA True H1975_Epitope_Rep3 946.4065969492998 946.40604496793 40.089 1 -0.015023715159178906 0.011626899926384618 0.09636474134598083 ['ENSG00000197601|ENST00000354817|FAR1'] 33363 13212 GKVQIPIML True NCI_RA007_Epitope_Rep3 997.5994235297699 997.59832993586 59.24 2 -0.015043462011701694 0.011626899926384618 0.09639652495954099 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 142014 21614 YVLDDLIVA True PC9_epitope_Rep4 1019.5539128059899 1019.55280993586 91.329 2 -0.015075902720334971 0.011626899926384618 0.09644875668036111 ['ENSG00000180104|ENST00000512944|EXOC3'] 96910 14447 SAVGQFVSL True NCI_RA007_Epitope_Rep5 906.4810822188999 906.47998993586 62.251 2 -0.01510999883970318 0.011626899926384618 0.09650367606159452 ['BRF1|p.L343Pfs*104|1|0.45|ENSG00000185024|chr14:105226091-105226092|-/A|frameshift_variant', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1', 'nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1'] 104667 14248 SQTLVSQGL True PC9_epitope_Rep2 931.4974605590301 931.49691496793 60.072 1 -0.015124767453578726 0.011626899926384618 0.09652747130441833 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 5075 21165 ALLEGLTVV True PC9_epitope_Rep4 913.54843350273 913.54788496793 89.574 1 -0.015155852485879206 0.011626899926384618 0.09657756965572731 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 124863 17543 VHLETILGA True PC9_epitope_Rep5 951.5389314481898 951.53782993586 72.487 2 -0.015183525484256506 0.011626899926384618 0.09662218500018661 ['ENSG00000165591|ENST00000374900|FAAH2'] 97727 10312 SEIIESVPP True H1975_Epitope_Rep1 969.5018772331299 969.50132496793 44.611 1 -0.015191129671862286 0.011626899926384618 0.09663444737111831 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ZNF451|p.H887Qfs*4|1|0.08|ENSG00000112200|chr6:57150770-57150773|ATAT/-|frameshift_variant', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 55269 19031 LADPSAFVAA True PC9_epitope_Rep2 960.4916469025999 960.49054993586 78.567 2 -0.015199305458409522 0.011626899926384618 0.09664763276270211 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 76260 8528 NPKEFYHEV True PC9_epitope_Rep1 1161.54547338061 1161.54382490379 37.64 3 -0.015226850369620874 0.011626899926384618 0.09669206514667615 ['ENSG00000174231|ENST00000304992|PRPF8'] 37085 21564 GVPQALFGV True PC9_epitope_Rep5 886.4912529797799 886.49014993586 87.986 2 -0.0152369996831688 0.011626899926384618 0.0967084406582972 ['ENSG00000010292|ENST00000315579|NCAPD2'] 87421 15604 QPYMPTVSA True PC9_epitope_Rep2 992.4637179025999 992.46262993586 65.3 2 -0.015272472927292457 0.011626899926384618 0.0967656912648464 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 114522 12206 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.4752299358599 51.981 2 -0.015279228846929362 0.011626899926384618 0.0967765975190299 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 49291 8022 KEQVPGFTP True H1975_Epitope_Rep3 1001.5181960036098 1001.51708993586 35.83 2 -0.01531288127301055 0.011626899926384618 0.09683093689305046 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'MTHFD1|p.V94Wfs*15|1|0.1|ENSG00000100714|chr14:64415393-64415397|TACTG/-|frameshift_variant'] 134246 15751 VYNAVANLW True NCI_RA007_Epitope_Rep3 1048.53418042092 1048.53308993586 69.594 2 -0.015341419845616504 0.011626899926384618 0.0968770362974409 ['SMPDL3A|p.A316Lfs*7|1|0.11|ENSG00000172594|chr6:122806258-122806258|G/-|frameshift_variant', 'nc|ENSG00000172594|Q92484-2|SMPDL3A', 'ENSG00000172594|ENST00000368440|SMPDL3A'] 76368 9187 NPYYGGESA True PC9_epitope_Rep5 956.3875757568799 956.38646993586 40.282 2 -0.015351059221551142 0.011626899926384618 0.09689261076253818 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 85224 9018 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57797496793 39.685 1 -0.015351177478989043 0.011626899926384618 0.09689280184399263 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 31562 10172 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43816993586 44.129 2 -0.015398807846749917 0.011626899926384618 0.09696978584797125 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 140296 5127 YRASGEQL True NCI_RA007_Epitope_Rep5 922.45084471978 922.44974993586 26.417 2 -0.015436512424564636 0.011626899926384618 0.09703075871694965 ['nc|ENSG00000106328|Q9NQT6-2|FSCN3'] 140568 8479 YRPVRQYVY True PC9_epitope_Rep2 1242.65094150866 1242.6493049037902 37.981 3 -0.015442354196795818 0.011626899926384618 0.09704020807831035 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A'] 108299 18141 SYIPSTVFF True NCI_RA007_Epitope_Rep4 1059.52769805815 1059.52660993586 78.507 2 -0.015443515017689088 0.011626899926384618 0.09704208584483003 ['ENSG00000140830|ENST00000268483|TXNL4B'] 59683 17958 LGAPALEGV True PC9_epitope_Rep2 825.45961849833 825.45852993586 74.38 2 -0.015444105095999654 0.011626899926384618 0.09704304037720235 ['KIF1A-C2orf54|2|fusion', 'KIF1A-C2orf54|1|fusion', 'nc|ENSG00000172478|Q08AI8-3|MAB21L4', 'nc|ENSG00000172478|Q08AI8-2|MAB21L4', 'ENSG00000172478|ENST00000388934|MAB21L4'] 72901 18264 MPTLPPPSV True PC9_epitope_Rep4 937.49428975489 937.49318993586 78.322 2 -0.015466863549202249 0.011626899926384618 0.09707986052751942 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 27939 21841 FQEGDIILV True PC9_epitope_Rep5 1032.5491617787197 1032.5485749679299 89.045 1 -0.015481378076896292 0.011648299304999242 0.0971033484375721 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 47142 9748 ITVNDLPVGR True H1975_Epitope_Rep1 1082.6084079903399 1082.60730993586 42.425 2 -0.015549112100523378 0.011689829848032213 0.09721301291661552 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 47812 6649 IYGGSVTG True NCI_RA007_Epitope_Rep2 752.3704691407601 752.36992496793 30.473 1 -0.015558915907258402 0.011689829848032213 0.09722889322541446 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 89232 18817 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48561496793 77.166 1 -0.015560166019342656 0.011689829848032213 0.09723091830636867 ['ENSG00000167658|ENST00000309311|EEF2'] 108760 20631 SYSMIVNNL True PC9_epitope_Rep1 1039.50083168731 1039.50027496793 84.177 1 -0.015575904365418785 0.011689829848032213 0.09725641579772759 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 110332 5339 TETQEKNPLP True H1975_Epitope_Rep3 1155.5771674317098 1155.57606993586 25.606 2 -0.015605631424886001 0.011689829848032213 0.09730458955643922 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000402089.4_1_4:91760056-91760137:-|nuORF'] 84305 6306 PYSDSTAKL True PC9_epitope_Rep2 980.48147614172 980.48036993586 29.654 2 -0.015613119511662516 0.011689829848032213 0.09731672701709446 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF'] 108078 15388 SYANVQDGF True PC9_epitope_Rep2 999.4297749220299 999.42866993586 64.472 2 -0.015613854787861689 0.011689829848032213 0.09731791888798408 ['ENSG00000152766|ENST00000371930|ANKRD22'] 16911 20019 EFNSTPAVF True PC9_epitope_Rep1 1010.4709114580198 1010.4703749679301 81.829 1 -0.0156192836745864 0.011710970646809248 0.09732671935620124 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 39193 13108 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 55.287 2 -0.015631560073147487 0.011710970646809248 0.0973466220919954 ['ENSG00000132646|ENST00000379143|PCNA'] 75909 9185 NLQYNISRNT True H1975_Epitope_Rep3 1221.61019889549 1221.60910993586 40.32 2 -0.015647529498387214 0.01172982448546757 0.09737251648512672 ['ENST00000298105.7_1_13:103543811-103548031:+|nuORF', 'nc|ENSG00000250878|A6NDL7|METTL21EP'] 102950 11766 SPEKFQIEA True PC9_epitope_Rep5 1047.5236753068698 1047.52256993586 50.255 2 -0.01566787242324201 0.01172982448546757 0.0974055097889688 ['ENSG00000113194|ENST00000261942|FAF2'] 78853 18492 PAEPAFLA True PC9_epitope_Rep4 814.4225047136199 814.42140993586 79.203 2 -0.01567792229436397 0.01172982448546757 0.09742181225145047 ['ENSG00000163807|ENST00000296121|KIAA1143'] 58848 9219 LESTPSPVV True H1975_Epitope_Rep3 927.49131254943 927.4907649679301 40.453 1 -0.01568408189000138 0.01172982448546757 0.0974318050640955 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 3956 13036 AHDPISPVL True PC9_epitope_Rep4 947.50763131991 947.50652993586 58.036 2 -0.015685133550825573 0.01172982448546757 0.09743351126547779 ['ENSG00000116199|ENST00000263733|FAM20B'] 87670 9018 QQSSIHNVL True PC9_epitope_Rep1 1024.53015766964 1024.5290699358602 39.535 2 -0.015712349664628953 0.01172982448546757 0.09747767394137191 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'ENST00000583577.1_1_17:56283442-56283917:-|nuORF'] 54252 18516 KWNPTAGVAF True PC9_epitope_Rep1 1089.56072952193 1089.56017496793 76.011 1 -0.015717436559520247 0.01172982448546757 0.09748592989707697 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 69097 15897 LTREACLSI True PC9_epitope_Rep2 1004.5324661687599 1004.53136993586 66.402 2 -0.01572727960893292 0.01172982448546757 0.09750190647222255 ['ENSG00000104356|ENST00000401707|POP1'] 25522 7251 FEIATKEDP True H1975_Epitope_Rep2 1048.5076908895599 1048.5065899358601 32.825 2 -0.015738690145908722 0.01172982448546757 0.09752042968144163 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 25523 7251 FEIATKEDP True H1975_Epitope_Rep2 1048.5076908895599 1048.5065899358601 32.825 2 -0.015738690145908722 0.01172982448546757 0.09752042968144163 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 46688 21940 ITDSSEVYV True PC9_epitope_Rep1 1011.4760564081099 1011.47494993586 89.21 2 -0.015752431453401338 0.01172982448546757 0.09754273994103636 ['ENSG00000114204|ENST00000264677|SERPINI2'] 3887 14828 AHAPATLML True PC9_epitope_Rep5 923.4898730807901 923.48876993586 62.035 2 -0.015767654300289688 0.011750194754609193 0.0975674599668012 ['ENST00000588498.1_1_19:10506000-10506648:-|nuORF'] 31597 4072 GEEPPRPSP True H1975_Epitope_Rep2 964.4614094034799 964.46030993586 20.748 2 -0.015776205035303064 0.011750194754609193 0.0975813473126135 ['ENSG00000104626|ENST00000250263|ERI1'] 25424 6120 FEDNQDVSA True H1975_Epitope_Rep2 1023.4145187807098 1023.4134299358601 28.519 2 -0.01578500867119268 0.011750194754609193 0.09759564690593119 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 110375 8026 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 35.845 2 -0.015786039543465014 0.011750194754609193 0.09759732143400084 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 73485 18600 MVDGTLLLL True NCI_RA007_Epitope_Rep3 973.5518046310099 973.55125496793 81.379 1 -0.015789690746374763 0.011750194754609193 0.09760325254293883 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 26258 8366 FHEGEAVSV True PC9_epitope_Rep4 973.4505103666098 973.44940993586 39.638 2 -0.015814203394503394 0.0117710699989181 0.09764307834202551 ['ENSG00000156521|ENST00000287078|TYSND1'] 24713 20223 FAMPYFIQV True NCI_RA007_Epitope_Rep5 1114.55213898418 1114.5510499358602 84.729 2 -0.0158203555270779 0.0117710699989181 0.0976530755995232 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|12|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 122093 18838 VGAANLPQV True PC9_epitope_Rep1 867.4814165720699 867.4808649679301 77.245 1 -0.015854199015463064 0.0117710699989181 0.09770808486541706 ['ENST00000550513.1_1_12:53689756-53691495:+|nuORF'] 108635 10981 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 47.224 3 -0.015868631337751266 0.011789646743245289 0.09773155006785761 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 133719 17221 VYDPATETW True PC9_epitope_Rep6 1080.4763907612798 1080.47528993586 78.831 2 -0.01587320749015547 0.011789646743245289 0.0977389911946853 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 90527 8947 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64349490379 39.369 3 -0.015875246646928107 0.011789646743245289 0.09774230713184742 ['ENSG00000127540|ENST00000591899|UQCR11'] 132475 16312 VVDGFNVLY True H1975_Epitope_Rep2 1024.52294703088 1024.5223749679299 67.961 1 -0.015886883336742697 0.011789646743245289 0.09776123149199609 ['nc|ENSG00000179889|Q6P996-3|PDXDC1', 'nc|ENSG00000179889|Q6P996-4|PDXDC1', 'nc|ENSG00000179889|Q6P996-5|PDXDC1', 'ENSG00000179889|ENST00000396410|PDXDC1', 'nc|ENSG00000179889|Q6P996-2|PDXDC1', 'ENST00000570001.5_1_16:15069056-15125764:+|nuORF'] 70102 19660 LVPDVVNEV True PC9_epitope_Rep5 982.53351171458 982.5329649679301 80.679 1 -0.01589386834237137 0.011789646743245289 0.09777259225810579 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 8071 7382 ATDRFRSLY True H1975_Epitope_Rep2 1127.5723568347898 1127.57071490379 33.335 3 -0.015902938191581912 0.011789646743245289 0.09778734535737264 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-10|DST'] 67852 20316 LTAPALALA True PC9_epitope_Rep3 839.5116540711899 839.51054993586 83.393 2 -0.01591645301042331 0.011789646743245289 0.09780933169946866 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 17680 15842 EHLQVITTL True PC9_epitope_Rep4 1052.5866099166 1052.58607496793 68.86 1 -0.015925197897107973 0.011789646743245289 0.09782356008521614 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 26557 8577 FIISRPTKL True H1975_Epitope_Rep1 1073.65971528721 1073.65860993586 37.918 2 -0.015933753734450235 0.011789646743245289 0.09783748233999304 ['ENSG00000111331|ENST00000228928|OAS3'] 106378 22656 STIDILYQL True PC9_epitope_Rep2 1064.57537652656 1064.5748749679299 92.643 1 -0.015941517479973376 0.011789646743245289 0.09785011693637241 ['ENSG00000115760|ENST00000421745|BIRC6'] 13735 13222 DQAKLIVGI True PC9_epitope_Rep1 955.5702315764698 955.56912993586 55.722 2 -0.015961844975460063 0.011789646743245289 0.0978832032212141 ['ENST00000489178.1_1_3:105269066-105271430:+|nuORF', 'nc|ENSG00000170017|Q13740-4|ALCAM', 'nc|ENSG00000170017|Q13740-2|ALCAM', 'ENSG00000170017|ENST00000306107|ALCAM'] 71783 5031 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 24.474 2 -0.015988708727775573 0.011789646743245289 0.09792694084499026 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 25215 12613 FDEFLGIR True H1975_Epitope_Rep3 995.5076313199098 995.50652993586 53.722 2 -0.016063804109156747 0.011806426501751503 0.09804928138225572 ['ENSG00000188676|ENST00000502986|IDO2', 'IDO2|p.G381Afs*8|1|0.19|ENSG00000188676|chr8:40015517-40015517|G/-|frameshift_variant'] 126631 16693 VLNEYFHNV True PC9_epitope_Rep1 1133.5505587610498 1133.54946993586 69.037 2 -0.016077826389131473 0.011806426501751503 0.09807213792282807 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 5969 12203 APHPPLSVV True PC9_epitope_Rep2 915.51780208079 915.51670993586 52.25 2 -0.016086115002676052 0.011806426501751503 0.09808565032314488 ['ENSG00000183856|ENST00000361170|IQGAP3'] 3521 10083 AGLQFPVGR True NCI_RA007_Epitope_Rep4 943.5239500903898 943.52284993586 45.631 2 -0.016091654715727582 0.011806426501751503 0.09809468212269434 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 69485 18045 LVAPPLPAA True PC9_epitope_Rep4 847.51673945163 847.51564993586 77.476 2 -0.01610294739042417 0.011806426501751503 0.09811309527536967 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 84201 16072 PYLDSFYEY True NCI_RA007_Epitope_Rep3 1195.5073565363898 1195.50624993586 70.907 2 -0.016117082910594112 0.011806426501751503 0.09813614735288557 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 30879 9754 GAPQVVAVTG True PC9_epitope_Rep2 897.4919812557698 897.49088993586 42.857 2 -0.0161465792832052 0.011806426501751503 0.09818426249058906 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 88036 14745 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54527496793 61.536 1 -0.01615078724984119 0.011806426501751503 0.09819112802122097 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 76664 10986 NQSDTSVSL True PC9_epitope_Rep3 949.43525422529 949.4347049679301 47.243 1 -0.01615855095827849 0.011806426501751503 0.09820379586041095 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 68543 21374 LTGLLLLQ True PC9_epitope_Rep2 869.55860426361 869.55750993586 87.684 2 -0.01616466778272243 0.011806426501751503 0.09821377736163832 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'ENST00000459805.5_1_1:155188177-155188668:-|nuORF', 'ENST00000473223.5_1_1:155187710-155188755:-|nuORF', 'ENST00000470104.1_1_1:155210013-155210993:-|nuORF', 'GBA|p.T69Dfs*12|1|0.16|ENSG00000177628|chr1:155239989-155239990|-/G|frameshift_variant', 'ENST00000467918.5_1_1:155209712-155213886:-|nuORF'] 101933 12811 SLPYQVSL True H1975_Epitope_Rep3 905.4858332461699 905.48528496793 54.496 1 -0.016194268184289675 0.011806426501751503 0.0982620900745345 ['nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 104555 13097 SQPPVQVSV True PC9_epitope_Rep4 939.5025459394699 939.50144993586 58.27 2 -0.0161980816947686 0.011806426501751503 0.09826831560934517 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 112513 5046 TLDRQLNHY True H1975_Epitope_Rep3 1158.57817049122 1158.57652490379 24.531 3 -0.016203558309554965 0.011806426501751503 0.09827725665583976 ['NSMCE2|p.I97Nfs*21|1|0.08|ENSG00000156831|chr8:125182121-125182122|-/A|frameshift_variant', 'ENST00000523824.5_1_8:126104167-126163564:+|nuORF', 'ENSG00000156831|ENST00000287437|NSMCE2'] 41312 16768 HVVEILVET True PC9_epitope_Rep1 1037.57571087973 1037.57460993586 69.322 2 -0.016242088761229567 0.011806426501751503 0.09834017771195744 ['ENSG00000170779|ENST00000336219|CDCA4'] 112979 21188 TLLRLLYEA True PC9_epitope_Rep5 1090.6386454894598 1090.63754993586 86.547 2 -0.016266023161572576 0.011806426501751503 0.09837927788745278 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 142169 11146 YVTEKVLAA True PC9_epitope_Rep5 992.5542471591598 992.55314993586 47.857 2 -0.016275011002544044 0.011806426501751503 0.09839396370360633 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000136872|ENST00000647789|ALDOB', 'ENSG00000109107|ENST00000226253|ALDOC'] 140443 13426 YRGQFPEL True PC9_epitope_Rep6 1008.5028802926398 1008.50178993586 63.326 2 -0.01630849540995628 0.011806426501751503 0.09844869011456815 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 8392 19713 ATLPTTLGV True PC9_epitope_Rep5 871.5014833103099 871.5009349679301 80.871 1 -0.016317073868748196 0.011806426501751503 0.09846271418758294 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 21868 11258 ESDEVELSY True H1975_Epitope_Rep3 1069.44515020265 1069.4445749679298 48.407 1 -0.016324652733823462 0.011806426501751503 0.09847510533512598 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 111926 19756 TIPNNLIGC True PC9_epitope_Rep5 943.47970231991 943.47860993586 81.036 2 -0.016360151223295302 0.01182370360763461 0.09853315910283036 ['ENSG00000169564|ENST00000303577|PCBP1'] 107251 17679 SVKNGFLTI True PC9_epitope_Rep3 977.55458151233 977.55348993586 73.198 2 -0.016367553201505944 0.01182370360763461 0.09854526734329455 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2'] 25540 8523 FEILNDEK True NCI_RA007_Epitope_Rep1 1006.4971262058599 1006.49602993586 37.153 2 -0.01637670758978208 0.01182370360763461 0.09856024369572065 ['DDX59|p.K440E|1|0.34|ENSG00000118197|chr1:200649223-200649223|T/C|missense_variant'] 1377 12245 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43342993586 52.182 2 -0.016439322638755922 0.01182370360763461 0.09866272483101739 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 29443 22356 FVEETVYLL True PC9_epitope_Rep5 1111.58012755383 1111.5795749679298 91.001 1 -0.016470841162011505 0.01182370360763461 0.09871434009878241 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 53308 17221 KQLEAIDQLHL True PC9_epitope_Rep5 1306.7245003717399 1306.72285490379 71.261 3 -0.01648168179500499 0.01182370360763461 0.09873209744797415 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 109814 13899 TEEEVEMLVA True H1975_Epitope_Rep2 1148.5271060047999 1148.5260099358602 58.608 2 -0.01648435324530107 0.01182370360763461 0.09873647373753128 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56553869-56554112:+|nuORF'] 592 11234 AARLPLDAA True PC9_epitope_Rep5 896.5079656730799 896.50686993586 48.201 2 -0.01649400555527925 0.01182370360763461 0.098752287038963 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 68770 9316 LTLGRWERAP True H1975_Epitope_Rep1 1197.66184054553 1197.6607499358602 40.74 2 -0.016512735074351997 0.01182370360763461 0.09878297672058849 ['ENSG00000182810|ENST00000332395|DDX28'] 36676 19415 GVIPTLVKL True PC9_epitope_Rep4 938.6164534929 938.61534993586 82.791 2 -0.01654452900984325 0.01182370360763461 0.09883508930208622 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF'] 118363 23175 TYNMVLNLL True PC9_epitope_Rep3 1079.56851732431 1079.56740993586 94.413 2 -0.016546634178225734 0.01182370360763461 0.09883854053325482 ['ENSG00000039123|ENST00000230640|MTREX'] 47951 21539 IYIPSYFDF True PC9_epitope_Rep6 1163.55391280599 1163.55280993586 95.724 2 -0.016557403632547218 0.01182370360763461 0.09885619744210855 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 25649 4230 FEQDVGSRTT True H1975_Epitope_Rep2 1138.5254662120199 1138.52436993586 21.379 2 -0.016559072944020106 0.01182370360763461 0.09885893454406575 ['ENSG00000157350|ENST00000342907|ST3GAL2'] 136961 11226 YAGSGNVL True PC9_epitope_Rep5 779.38136817763 779.38026993586 48.17 2 -0.016565127457718966 0.01182370360763461 0.0988688623463148 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 141453 17767 YTGEGQWEV True PC9_epitope_Rep5 1067.45598966987 1067.4548899358601 73.358 2 -0.016578712300246698 0.01182370360763461 0.09889114053916648 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 2958 8314 AFFAGSQR True PC9_epitope_Rep1 882.4348007328199 882.43370993586 36.814 2 -0.016584575185381784 0.01182370360763461 0.09890075639022923 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'chr11:62629292-62629588|114|13.33|0.66|4.34|-|2|None,GANAB|1'] 95774 18084 RYIDRIHIF True PC9_epitope_Rep3 1231.68257599011 1231.68094490379 74.758 3 -0.01663858692328227 0.01182370360763461 0.0989893742916386 ['ENSG00000174231|ENST00000304992|PRPF8'] 71959 13325 MESPFITSP True H1975_Epitope_Rep3 1007.46338354943 1007.46228993586 56.515 2 -0.016651982987034592 0.011843271163363662 0.099011362365091 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 8356 12471 ATLGGPAIVHA True PC9_epitope_Rep3 1005.56072952193 1005.55962993586 52.995 2 -0.01665404938193902 0.011843271163363662 0.09901475442733704 ['ENSG00000123983|ENST00000357430|ACSL3'] 119623 9187 VATVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 40.68 2 -0.016670699788130326 0.011843271163363662 0.09904208976013569 ['CON__P00761'] 72858 11206 MPQSGTGVSV True PC9_epitope_Rep1 961.45388149489 961.45333496793 47.985 1 -0.016671568351383084 0.011843271163363662 0.09904351584996862 ['ENSG00000115233|ENST00000409682|PSMD14'] 48156 11323 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 48.876 3 -0.016679409518104437 0.011843271163363662 0.09905639090039724 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 87475 8662 QQDPQQYNV True PC9_epitope_Rep4 1118.49925146418 1118.49814993586 40.809 2 -0.01669085581835543 0.011843271163363662 0.0990751877000247 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 114527 11234 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.4752299358599 50.987 2 -0.016725051686281737 0.011843271163363662 0.09913135867500336 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 31286 20597 GDIEQFLITG True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 84.495 2 -0.01673663458642622 0.011843271163363662 0.09915039028499759 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 117655 13800 TVTNAVVTV True PC9_epitope_Rep5 902.50729696674 902.50618993586 58.1 2 -0.016831397089238656 0.01186385737439222 0.09930619233102858 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 82794 8990 PRQLAPTL True PC9_epitope_Rep4 894.5287011176599 894.52760993586 42.136 2 -0.01683789264089792 0.01186385737439222 0.09931687839187973 ['ENST00000470487.5_1_3:167813015-167813639:-|nuORF'] 103031 11541 SPFRVNVGA True PC9_epitope_Rep2 945.5032146458099 945.50210993586 49.718 2 -0.016842698344689135 0.01186385737439222 0.09932478496272827 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 73292 13036 MTDGGLGLY True H1975_Epitope_Rep3 925.42151873745 925.4209649679301 55.382 1 -0.016888760414237848 0.01186385737439222 0.09940059167802938 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 8388 19805 ATLPTTLGV True PC9_epitope_Rep1 871.5014833103099 871.5009349679301 80.995 1 -0.016901032989731626 0.011905276349336675 0.09942079638250112 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 13424 5251 DM[Oxidation]ESVLRN True H1975_Epitope_Rep3 978.44404546762 978.44294993586 25.282 2 -0.016937733867246094 0.011905276349336675 0.0994812359416279 ['ENSG00000124570|ENST00000380539|SERPINB6'] 96400 7762 SAAAALVLK True NCI_RA007_Epitope_Rep4 842.52255310806 842.52144993586 36.536 2 -0.016951235253549597 0.011905276349336675 0.09950347694805146 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 122443 9654 VGDYDQKV True H1975_Epitope_Rep3 922.4396113297398 922.4390649679301 42.151 1 -0.016982032340345333 0.011905276349336675 0.09955422290967163 ['SYCP2L|p.Q230K|1|0.25|ENSG00000153157|chr6:10907553-10907553|C/A|missense_variant'] 27069 22917 FLFSKFIEL True PC9_epitope_Rep1 1142.6375828603 1142.63648993586 92.948 2 -0.016982629812574652 0.011905276349336675 0.09955520758172358 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 34352 6547 GPEGEAVPAA True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 30.094 2 -0.016987889860565087 0.011905276349336675 0.09956387677926935 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 37077 21291 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49070496793 87.359 1 -0.017003738467137423 0.011905276349336675 0.09959000052392102 ['ENSG00000010292|ENST00000315579|NCAPD2'] 93496 5020 RQKLEAQL True NCI_RA007_Epitope_Rep4 984.5716285587998 984.57052993586 25.795 2 -0.01704278633076438 0.011926109970832884 0.0996543855734329 ['ENSG00000204220|ENST00000374606|PFDN6', 'ENST00000395134.3_1_6:33257633-33258228:+|nuORF', 'ENST00000491382.1_1_6:33257633-33258228:+|nuORF'] 59588 9112 LFVKAGID True NCI_RA007_Epitope_Rep4 861.4960040070498 861.49490993586 41.888 2 -0.017064585705955412 0.011926109970832884 0.09969034317512879 ['nc|ENSG00000112782|Q9NZA1|CLIC5', 'nc|ENSG00000112782|Q9NZA1-3|CLIC5', 'ENSG00000112782|ENST00000339561|CLIC5'] 29384 15509 FVDPLVTNY True H1975_Epitope_Rep2 1066.53351171458 1066.5324099358602 64.812 2 -0.017065646738228846 0.011926109970832884 0.09969209356567593 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 39938 15285 HPIEPVLITA True PC9_epitope_Rep4 1088.62299542532 1088.62188993586 66.723 2 -0.017082470419550126 0.011945908580316253 0.09971985066606737 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 134438 22200 VYPNWAIGL True PC9_epitope_Rep2 1031.5440168286298 1031.54290993586 90.874 2 -0.017089438887633982 0.011945908580316253 0.09973134946538253 ['ENSG00000131389|ENST00000622186|SLC6A6'] 133617 14539 VYADQPHIF True PC9_epitope_Rep4 1088.52909504048 1088.5279899358602 63.838 2 -0.017093846699746486 0.011945908580316253 0.09973862337586487 ['ENSG00000100439|ENST00000428304|ABHD4'] 70348 19901 LVSPASFENV True PC9_epitope_Rep2 1061.5393253710101 1061.53822993586 81.944 2 -0.017103314326035228 0.011945908580316253 0.09975424845430444 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 138766 21365 YITDLFQVL True NCI_RA007_Epitope_Rep5 1110.59611197114 1110.5950099358602 89.24 2 -0.01710810614477055 0.011945908580316253 0.09976215740197325 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10'] 49488 9842 KFDQLLAEEK True PC9_epitope_Rep4 1219.6448530687096 1219.6437499358601 45.506 2 -0.017111087494091754 0.011945908580316253 0.09976707838055572 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 8548 9219 ATVAVPLVGK True NCI_RA007_Epitope_Rep4 953.5909670210499 953.58986993586 42.311 2 -0.01711758917644447 0.011945908580316253 0.0997778105892525 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 79245 6272 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 31.673 2 -0.017143295470118714 0.01196053455385479 0.0998202517139961 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 134488 10499 VYPTKTFPNL True NCI_RA007_Epitope_Rep3 1178.6335601090198 1178.6324699358602 48.359 2 -0.017180894089525237 0.01196053455385479 0.09988235069895195 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 77287 16962 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.51837496793 70.832 1 -0.017216533106689795 0.01196053455385479 0.09994123904629136 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 26005 21205 FGFTLLEAL True NCI_RA007_Epitope_Rep4 1009.5484335027298 1009.54732993586 91.94 2 -0.017226760951808317 0.01196053455385479 0.09995814374385362 ['ENSG00000155957|ENST00000358230|TMBIM4'] 103101 13879 SPHGIIVIA True PC9_epitope_Rep2 905.5334521449299 905.53234993586 58.667 2 -0.017245132141804728 0.01196053455385479 0.09998851306769599 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 128586 14974 VPTNIIAA True PC9_epitope_Rep5 797.4647038787699 797.46360993586 62.601 2 -0.01725810694820376 0.01196053455385479 0.1000099656928173 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 87686 17400 QQVQRLPFL True PC9_epitope_Rep6 1127.64512785223 1127.64402993586 79.544 2 -0.017261547677776098 0.01196053455385479 0.10001565517695056 ['ENSG00000132963|ENST00000380842|POMP'] 54932 21982 KYPSPFFVF True PC9_epitope_Rep1 1130.5800679841798 1130.5794749679299 89.374 1 -0.01732557728383411 0.01196053455385479 0.10012157543705634 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 52669 19442 KLVEFDFLGA True PC9_epitope_Rep6 1137.60701100801 1137.6059099358602 87.445 2 -0.017344921473177476 0.01196053455385479 0.100153591356342 ['ENSG00000013810|ENST00000313288|TACC3', 'TACC3|p.A598S|1|0.3|ENSG00000013810|chr4:1737284-1737284|G/T|missense_variant', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 80078 14483 PFLGAPAAT True PC9_epitope_Rep5 843.44905381463 843.44794993586 60.71 2 -0.017348159218250732 0.01196053455385479 0.1001589507655522 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant'] 138123 21767 YGIENEVFL True PC9_epitope_Rep2 1082.52842633414 1082.5278749679298 89.197 1 -0.0173634748964474 0.01196053455385479 0.10018430548601737 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 29084 20410 FTIGEAITSA True PC9_epitope_Rep2 1008.5127762699999 1008.51166993586 83.932 2 -0.01736670851634877 0.01196053455385479 0.10018965925805927 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 103901 10529 SQAEKVYIM True PC9_epitope_Rep4 1067.5321318155898 1067.53102993586 48.225 2 -0.01740163208254919 0.01196053455385479 0.10024749400799386 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000515766.1_1_4:1332171-1332954:+|nuORF'] 108493 14546 SYMGHFDLL True NCI_RA007_Epitope_Rep4 1081.49026700361 1081.4891699358602 63.328 2 -0.017427995062391198 0.01196053455385479 0.1002911681461982 ['ENSG00000169976|ENST00000367569|SF3B5'] 111267 15763 THLGPLASL True PC9_epitope_Rep4 907.51271670035 907.51160993586 68.555 2 -0.01744263913743857 0.01196053455385479 0.10031543416542385 ['ENSG00000127399|ENST00000359623|LRRC61'] 142806 10443 YYSHLEGARF True PC9_epitope_Rep2 1241.5829215184897 1241.58127490379 45.489 3 -0.017447637514061018 0.01196053455385479 0.10032371771913437 ['ENSG00000142207|ENST00000382751|URB1'] 104325 7869 SQIQEFKEA True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 35.635 2 -0.017449360053885126 0.01196053455385479 0.10032657251118743 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 26984 10131 FLEGVGIR True H1975_Epitope_Rep3 889.5021520166499 889.50104993586 44.012 2 -0.01746536820045849 0.01196053455385479 0.10035310588061365 ['ENSG00000101331|ENST00000452892|CCM2L'] 110110 6745 TEMFPERVRSA True H1975_Epitope_Rep2 1321.6448701520499 1321.64323490379 30.859 3 -0.017471641814172018 0.01196053455385479 0.10036350573140711 ['ENSG00000100216|ENST00000216034|TOMM22', 'ENST00000492561.1_1_22:39078186-39079843:+|nuORF'] 40084 13781 HPVHPFLAV True PC9_epitope_Rep5 1015.56033559911 1015.55922993586 58.028 2 -0.01748276891112096 0.01196053455385479 0.10038195318742114 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 108462 11482 SYLTSASSL True NCI_RA007_Epitope_Rep4 927.45492704071 927.4543749679301 51.1 1 -0.01750966907247809 0.01196053455385479 0.10042656074382353 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 108404 16826 SYLKQLPHF True PC9_epitope_Rep5 1131.6076797143498 1131.60658993586 69.731 2 -0.017556001334273777 0.01196053455385479 0.10050342554987414 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 71781 4793 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 23.564 2 -0.017570473325827556 0.01196053455385479 0.10052744319620799 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 86289 18057 QISDTSVVL True PC9_epitope_Rep1 960.51277627 960.51166993586 74.249 2 -0.017586242491656058 0.01196053455385479 0.10055361836479719 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 4036 6704 AHFQKSYTL True PC9_epitope_Rep4 1093.5556441414901 1093.5545499358602 32.971 2 -0.017587727487749043 0.01196053455385479 0.10055608355783033 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 14169 10004 DSDPLQDHNMY True H1975_Epitope_Rep2 1333.5244802358502 1333.5233899358602 43.47 2 -0.017594714378555705 0.01196053455385479 0.10056768285296473 ['ENSG00000010404|ENST00000340855|IDS'] 102021 20455 SLQSIYTL True PC9_epitope_Rep2 923.4963979298699 923.49530993586 84.109 2 -0.017619178256080056 0.01196053455385479 0.1006083042339884 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 48877 3136 KEAPPMEKP True NCI_RA007_Epitope_Rep2 1025.52156713189 1025.52046993586 16.829 2 -0.017657823202710244 0.011981089307687326 0.10067249700195909 ['ENSG00000115268|ENST00000592588|RPS15'] 46662 23121 ITDPSILFL True PC9_epitope_Rep2 1017.5746482505699 1017.57354993586 94.426 2 -0.017669689490766898 0.011981089307687326 0.1006922139416121 ['nc|ENSG00000118777|Q9UNQ0-2|ABCG2', 'ENSG00000118777|ENST00000237612|ABCG2'] 95664 13973 RYFDPANGKF True PC9_epitope_Rep3 1213.5880068989297 1213.58635490379 58.82 3 -0.017683082945280863 0.011981089307687326 0.10071447177273436 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 45171 12044 IPPPVPPSA True PC9_epitope_Rep4 873.4960040070499 873.49490993586 54.133 2 -0.01768553499345321 0.011981089307687326 0.10071854708029984 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 40485 8870 HRDLPIKL True PC9_epitope_Rep4 990.5974493838199 990.59634993586 41.65 2 -0.01772973291225802 0.01199827362969357 0.10079202457938231 ['ENSG00000136628|ENST00000366923|EPRS1'] 111203 13797 THISDTSVVL True PC9_epitope_Rep3 1070.56078909158 1070.5596899358602 58.148 2 -0.017733697449627443 0.01199827362969357 0.10079861738263365 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 40650 12111 HRNSMKVFL True PC9_epitope_Rep5 1130.60188314126 1130.6002349037901 51.576 3 -0.01778326520880977 0.01199827362969357 0.10088107216589193 ['ENSG00000185033|ENST00000411539|SEMA4B'] 53227 6693 KQFEKQVEL True PC9_epitope_Rep4 1147.6237237013097 1147.62262993586 32.928 2 -0.01780357355936654 0.01199827362969357 0.10091486873112152 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 35513 8814 GSPRVSGTAL True PC9_epitope_Rep3 943.5086939490699 943.50758993586 38.853 2 -0.017805164990823383 0.01199827362969357 0.1009175174915262 ['ENST00000379613.7_1_6:10398366-10398585:-|nuORF'] 96253 15236 RYQDIIHSI True PC9_epitope_Rep5 1143.6036569630699 1143.60254993586 63.614 2 -0.017836908668575784 0.01199827362969357 0.10097036183001658 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 130532 5961 VSQVGKEL True PC9_epitope_Rep1 858.4810822188998 858.47998993586 27.743 2 -0.017841501377511962 0.01199827362969357 0.10097800906445492 ['ENSG00000168209|ENST00000307365|DDIT4'] 112799 24079 TLIEDILGV True PC9_epitope_Rep5 971.5539128059899 971.5533649679301 97.603 1 -0.017842806458420093 0.01199827362969357 0.10098018220700732 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 108641 10618 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 45.829 3 -0.0178434559451683 0.01199827362969357 0.10098126370606009 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 86610 16009 QLELTDAEL True PC9_epitope_Rep2 1030.51825557326 1030.51714993586 66.834 2 -0.017847588249585822 0.01199827362969357 0.10098814484868035 ['ENSG00000122735|ENST00000242317|DNAI1', 'nc|ENSG00000122735|Q9UI46-2|DNAI1'] 35673 11697 GTEFGGSIY True H1975_Epitope_Rep2 929.4130622287298 929.4125149679301 50.067 1 -0.017855763124308876 0.01199827362969357 0.1010017587086143 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 42759 8506 IELVSNSA True H1975_Epitope_Rep2 831.4337976733101 831.43324496793 37.672 1 -0.01791580779524463 0.01199827362969357 0.1011017936102728 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 69885 20241 LVIGQFLEA True PC9_epitope_Rep6 988.5593325395998 988.55822993586 90.541 2 -0.017924059371865718 0.01199827362969357 0.1011155464083702 ['ENST00000596386.1_1_19:40477100-40485896:+|nuORF', 'ENST00000593455.5_1_19:40477100-40486089:+|nuORF', 'nc|ENSG00000013275|P43686-2|PSMC4', 'ENSG00000013275|ENST00000157812|PSMC4', 'ENST00000601697.5_1_19:40477100-40486546:+|nuORF'] 121984 19839 VFTYVGALF True NCI_RA007_Epitope_Rep2 1015.5378688190298 1015.5372749679301 82.157 1 -0.017956214925984974 0.01199827362969357 0.10116915258794454 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 128166 14268 VPLRFPAGSAA True PC9_epitope_Rep1 1084.6029286870798 1084.60182993586 59.705 2 -0.017976975196472494 0.01199827362969357 0.10120377274123149 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 88939 8907 QVGPEAGMQKV True PC9_epitope_Rep1 1142.5753936099 1142.5742899358602 39.1 2 -0.01797878322975511 0.01199827362969357 0.10120678825191035 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 1346 6441 AEEAARKLLP True H1975_Epitope_Rep2 1096.62405805448 1096.62296993586 29.695 2 -0.017982579770605165 0.01199827362969357 0.10121312048724719 ['nc|ENSG00000088298|Q9BV94-2|EDEM2', 'ENSG00000088298|ENST00000374492|EDEM2'] 134721 13560 VYTSGIYNI True NCI_RA007_Epitope_Rep1 1028.51786165044 1028.51676993586 56.755 2 -0.018014601401806933 0.012039094694599668 0.1012665406501643 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'TNS1|p.G239Dfs*4|1|0.05|ENSG00000079308|chr2:217885769-217885769|C/-|frameshift_variant', 'TNS1|p.K282Rfs*80|1|0.15|ENSG00000079308|chr2:217885063-217885063|C/-|frameshift_variant'] 32129 6814 GETSVPPPP True H1975_Epitope_Rep2 879.4337976733099 879.43324496793 31.129 1 -0.018072696326693498 0.012039094694599668 0.10136350974341597 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 24834 14649 FAVPENSSV True PC9_epitope_Rep2 948.4552613938799 948.45471496793 61.614 1 -0.018129496456390233 0.012039094694599668 0.10145838258048567 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 60433 5416 LGVIEDHSNR True PC9_epitope_Rep3 1138.5730851107799 1138.57144490379 25.905 3 -0.01813411606855222 0.012039094694599668 0.10146610150878044 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 138389 15678 YHGLTVPL True PC9_epitope_Rep4 898.4912529797799 898.49014993586 68.231 2 -0.01813720444203082 0.012039094694599668 0.10147126212124875 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 6411 8005 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 35.767 2 -0.018150911265939963 0.012039094694599668 0.1014941682510694 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 93075 12320 RPNDIMAEV True PC9_epitope_Rep4 1043.50697969691 1043.50647496793 55.199 1 -0.01815160893380758 0.012039094694599668 0.10149533425729432 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 97252 12206 SEAEIEREC True H1975_Epitope_Rep2 1064.44443901 1064.4433499358602 52.032 2 -0.01816284858620849 0.012039094694599668 0.10151412032605689 ['ENSG00000166262|ENST00000299338|FAM227B'] 44153 21579 IITDFDMTL True PC9_epitope_Rep4 1067.52089842555 1067.52037496793 91.186 1 -0.01822645041503486 0.012039094694599668 0.10162047245718918 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF', 'ENST00000461851.1_1_7:33061643-33066527:-|nuORF', 'ENST00000464840.5_1_7:33063600-33075596:-|nuORF'] 120313 13637 VEDWDSFQA True H1975_Epitope_Rep1 1095.45090428943 1095.44980993586 57.587 2 -0.018324298669823384 0.01206014972708248 0.10178424723822237 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 76739 14489 NQVEALNNL True PC9_epitope_Rep6 1013.5141732523299 1013.51306993586 67.616 2 -0.018326142849975205 0.01206014972708248 0.10178733578965699 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 89460 16289 QYESKVFYL True PC9_epitope_Rep6 1175.5862755634298 1175.5851699358602 75.016 2 -0.01836098777519834 0.01208120294263586 0.10184570526524817 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 48878 3242 KEAPPMEKP True NCI_RA007_Epitope_Rep4 1025.52156713189 1025.52046993586 18.107 2 -0.018377109075512002 0.01208120294263586 0.10187271858322623 ['ENSG00000115268|ENST00000592588|RPS15'] 77313 10514 NSDPNLHLL True NCI_RA007_Epitope_Rep4 1021.5192586327701 1021.51816993586 47.29 2 -0.01847464284496009 0.012101732208727916 0.10203625943715604 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 97370 7492 SEDLRVQDV True H1975_Epitope_Rep2 1059.51965255559 1059.5185499358602 33.768 2 -0.018480666603856107 0.012101732208727916 0.10204636605904756 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 42989 5753 IESSSPEV True H1975_Epitope_Rep2 846.39707781142 846.39598993586 27.126 2 -0.018496683465727203 0.012101732208727916 0.10207324255955127 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 36086 21392 GVAETLVLV True PC9_epitope_Rep3 899.5327834385898 899.53168993586 87.583 2 -0.018507887777459636 0.012101732208727916 0.10209204657852514 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 5221 20222 ALPEDLVEV True PC9_epitope_Rep4 983.5175272972699 983.51642993586 85.923 2 -0.01851551594738635 0.012122780905541534 0.10210485024707706 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 117646 14175 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.50618993586 59.346 2 -0.018523551664405013 0.012122780905541534 0.10211833922646575 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 41751 5490 IAPALVSK True H1975_Epitope_Rep3 797.5010893874901 797.49998993586 26.17 2 -0.018569239093225946 0.012156482379566763 0.10219505588713977 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 138414 11308 YHHGYSYIL True PC9_epitope_Rep4 1151.53999407735 1151.5388899358602 51.274 2 -0.018580752163341534 0.012156482379566763 0.10221439477816588 ['ENSG00000134531|ENST00000256951|EMP1'] 119632 9718 VATVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 42.348 2 -0.018583161370681882 0.012156482379566763 0.10221844193911532 ['CON__P00761'] 4990 4381 ALHHGIDLEK True NCI_RA007_Epitope_Rep4 1131.6036569630699 1131.6020249037902 23.203 3 -0.018585042384995136 0.012156482379566763 0.10222160188361762 ['ENSG00000115866|ENST00000264161|DARS1', 'nc|ENSG00000115866|P14868-2|DARS1', 'ENST00000478212.5_1_2:136664888-136669084:-|nuORF', 'ENST00000491481.1_1_2:136668634-136670100:-|nuORF', 'ENST00000489964.5_1_2:136664888-136672125:-|nuORF'] 85779 4525 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 22.766 2 -0.01862018689425651 0.012156482379566763 0.10228065465068376 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 78524 21427 NYPPQYLILKL True PC9_epitope_Rep1 1360.77547331544 1360.77436993586 87.257 2 -0.01864985404882352 0.012156482379566763 0.10233052307461851 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 8423 19333 ATMPVVPSV True PC9_epitope_Rep1 899.4786396907499 899.47754993586 79.17 2 -0.018661817788187693 0.012156482379566763 0.10235063825463162 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2', 'ENST00000479237.5_1_9:131770965-131773053:-|nuORF', 'ENST00000461811.5_1_9:131770965-131772716:-|nuORF'] 95500 8334 RWPKKSAEF True PC9_epitope_Rep5 1147.61382772395 1147.61218490379 36.998 3 -0.018681443958867748 0.012156482379566763 0.10238364281162837 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 81782 18499 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 75.947 2 -0.018687011552874205 0.012156482379566763 0.10239300701355811 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 142374 15528 YYEKLHTYF True PC9_epitope_Rep3 1262.5971746003 1262.5960699358602 64.879 2 -0.01869627973590918 0.012156482379566763 0.10240859665093115 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 17468 17633 EHFDRILEM True PC9_epitope_Rep5 1188.5597435457598 1188.55810490379 72.836 3 -0.018700782432335597 0.012156482379566763 0.10241617107357236 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 142872 14494 YYTNSLEKL True PC9_epitope_Rep5 1129.5655401188499 1129.56444993586 60.751 2 -0.018716824355774167 0.012156482379566763 0.10244316003657579 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant', 'ZFHX3|p.S2241Kfs*30|1|0.48|ENSG00000140836|chr16:72795962-72795963|-/C|frameshift_variant'] 105144 16094 SRFPEALRL True PC9_epitope_Rep1 1087.61382772395 1087.6127299358602 66.722 2 -0.018723961886436963 0.012156482379566763 0.10245516988192184 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 100443 20565 SLAGGIIGV True PC9_epitope_Rep3 785.46470387877 785.46360993586 84.369 2 -0.01879013785600499 0.012156482379566763 0.10256656814783387 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 652 8609 AATAVTQAL True NCI_RA007_Epitope_Rep4 844.4654321547599 844.46432993586 39.897 2 -0.018800304539180773 0.012156482379566763 0.10258369012142857 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 73879 11934 NATTVVTTV True PC9_epitope_Rep1 904.48656152216 904.48546993586 50.77 2 -0.0188025296732253 0.012156482379566763 0.10258743780217615 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 103671 6288 SPVFRTGSE True PC9_epitope_Rep4 978.4770594676199 978.47596993586 31.246 2 -0.018827688813367716 0.012156482379566763 0.10262981894270182 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 128101 14885 VPLGPGQISA True PC9_epitope_Rep4 937.5232813840499 937.52218993586 65.192 2 -0.0188647953677236 0.012156482379566763 0.10269234882324024 ['LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 121966 19390 VFTNSSWLW True NCI_RA007_Epitope_Rep5 1138.54474510462 1138.54364993586 81.469 2 -0.018877322658766717 0.012156482379566763 0.10271346531395759 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 5971 12087 APHPPLSVV True PC9_epitope_Rep2 915.51780208079 915.51670993586 51.801 2 -0.018900485469090827 0.012156482379566763 0.10275251769982192 ['ENSG00000183856|ENST00000361170|IQGAP3'] 6464 13198 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37888993586 55.773 2 -0.01891345783237539 0.012156482379566763 0.10277439371896971 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 78082 13439 NVVNRLTSV True PC9_epitope_Rep1 1000.56654317836 1000.56544993586 56.553 2 -0.018930150826275877 0.012156482379566763 0.10280254898659515 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 31290 18582 GDIEQFLITG True PC9_epitope_Rep6 1091.54989005471 1091.5487899358602 84.117 2 -0.01895182412713816 0.012156482379566763 0.10283911259611014 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 45821 17798 ISDGANIINL True PC9_epitope_Rep4 1028.55022440788 1028.54912993586 76.491 2 -0.018962945993775474 0.012156482379566763 0.1028578792107059 ['nc|ENSG00000244694|Q6ZW05|PTCHD4', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 99092 13017 SHGPIAVL True PC9_epitope_Rep3 792.4493881678001 792.44828993586 55.099 2 -0.01897079844020294 0.012156482379566763 0.10287113061709655 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 34655 13942 GQATTAYFL True NCI_RA007_Epitope_Rep5 970.47599683846 970.47544496793 60.313 1 -0.01897427976859728 0.012156482379566763 0.10287700593125952 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 17239 14123 EHAEALLL True PC9_epitope_Rep4 894.4810822188999 894.48053496793 62.229 1 -0.018997114942305927 0.012156482379566763 0.10291555004021674 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 46451 9094 ISTEVNPKL True PC9_epitope_Rep6 999.56006081559 999.55896993586 45.064 2 -0.019007902611335756 0.012156482379566763 0.10293376245975931 ['ENSG00000007545|ENST00000397412|CRAMP1'] 57678 8015 LEEGEGPIA True H1975_Epitope_Rep3 913.4392769765699 913.43872496793 35.802 1 -0.0190116534942144 0.012156482379566763 0.10294009547986036 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509178.5_1_5:134117763-134126202:+|nuORF'] 75009 8607 NHSADFETV True PC9_epitope_Rep5 1018.43558857846 1018.43448993586 38.051 2 -0.019029067137312887 0.012156482379566763 0.10296950049057524 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 107853 7473 SVVGPVKGV True PC9_epitope_Rep6 840.5069030439199 840.50580993586 37.989 2 -0.019040235879583416 0.012156482379566763 0.10298836342908574 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 137185 9072 YAYDGKDYLA True NCI_RA007_Epitope_Rep5 1177.5291546101298 1177.52804993586 41.551 2 -0.019042780236448568 0.012156482379566763 0.10299266095303024 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 76419 22309 NQDNLQLFL True PC9_epitope_Rep1 1103.5611234447501 1103.56002993586 90.623 2 -0.019044764435880594 0.012156482379566763 0.1029960124376137 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 688 5408 AAVADPHSL True NCI_RA007_Epitope_Rep3 879.4450310633501 879.44392993586 28.285 2 -0.019060061853194938 0.012156482379566763 0.10302185373875634 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000594962.5_1_19:17611587-17615418:+|nuORF', 'nc|ENSG00000130304|Q6PCB7-2|SLC27A1'] 114586 12715 TQDGTPITV True PC9_epitope_Rep2 930.4658260775799 930.4652749679301 54.213 1 -0.019067448730924915 0.012156482379566763 0.10303433376196193 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 27855 8466 FQDNHGVTV True PC9_epitope_Rep3 1015.4723084403499 1015.47120993586 37.527 2 -0.019074667937013158 0.012156482379566763 0.10304653155909306 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 87794 12976 QRDPNSPLYSV True PC9_epitope_Rep3 1274.62551460646 1274.62440993586 54.94 2 -0.01910060477665951 0.012176986572986487 0.1030903638433155 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF'] 78464 20528 NYMPGQLTI True PC9_epitope_Rep3 1035.5059170677498 1035.50537496793 84.223 1 -0.01911130168223186 0.012176986572986487 0.10310844512440338 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 75100 12762 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56087496793 53.963 1 -0.0191145610094773 0.012176986572986487 0.10311395491134592 ['ENSG00000171223|ENST00000302754|JUNB'] 100091 19926 SISDVIAQV True PC9_epitope_Rep4 930.5022115863 930.50110993586 84.779 2 -0.01912643916145445 0.012176986572986487 0.10313403633724046 ['ENSG00000154122|ENST00000284268|ANKH'] 58390 7772 LENMPSAEA True H1975_Epitope_Rep3 960.4222470134399 960.42114993586 34.88 2 -0.019157545881245394 0.012198275862068966 0.10318663929179886 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 29818 9361 FVRCCGLVLGA True NCI_RA007_Epitope_Rep3 1136.5834561958 1136.58234993586 43.913 2 -0.01916862359248193 0.012219300892202922 0.10320537689933194 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 37041 9827 GVPENGYQTLY True H1975_Epitope_Rep3 1239.5771674317102 1239.57606993586 42.826 2 -0.01916908233347068 0.012219300892202922 0.10320615289844506 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 106213 10342 STDWHVVNY True H1975_Epitope_Rep3 1119.49852318819 1119.49742993586 44.833 2 -0.019230550610835926 0.012260817100499914 0.10331016969744793 ['ENSG00000147251|ENST00000276202|DOCK11'] 57613 7916 LEEDHACIP True H1975_Epitope_Rep2 1025.4487961144498 1025.4476899358601 35.398 2 -0.019235514047775893 0.012260817100499914 0.10331857213339968 ['ENSG00000167658|ENST00000309311|EEF2'] 90664 4451 REQEAREPVL True H1975_Epitope_Rep3 1225.6414990237697 1225.6398449037902 22.243 3 -0.019241396334926275 0.012260817100499914 0.10332853069733364 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 49563 14332 KFNPVSFTW True NCI_RA007_Epitope_Rep3 1124.5654805492 1124.5643899358602 63.69 2 -0.019265949019960087 0.012260817100499914 0.10337010523909822 ['ENSG00000124702|ENST00000326974|KLHDC3'] 7509 14476 ASDMLQLEY True H1975_Epitope_Rep1 1068.4797618895598 1068.47917496793 60.881 1 -0.0192741967845069 0.012260817100499914 0.10338407370671807 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 117024 8387 TVIAKVNNV True PC9_epitope_Rep1 956.5654805492 956.56438993586 37.097 2 -0.01930832176619824 0.012260817100499914 0.10344188244322547 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 121522 17767 VFAGVFNTF True NCI_RA007_Epitope_Rep4 1000.50181766348 1000.50127496793 76.913 1 -0.01930969606590924 0.012275487789120042 0.10344421103533387 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 89084 18593 QVPAAFAGL True PC9_epitope_Rep6 872.4756029156398 872.4745099358599 84.16 2 -0.019314976992671127 0.012275487789120042 0.10345315930685699 ['ENSG00000132965|ENST00000380490|ALOX5AP'] 24758 11475 FASGAVEL True H1975_Epitope_Rep2 792.40176926904 792.40122496793 49.193 1 -0.019324987652029474 0.012275487789120042 0.10347012340788478 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8', 'ENST00000428182.2_1_12:15408356-15408710:-|nuORF'] 44668 20504 ILSSNIISV True PC9_epitope_Rep1 944.55424715916 944.55314993586 83.682 2 -0.01932826836808752 0.012275487789120042 0.10347568335735124 ['nc|ENSG00000204385|Q53GD3-3|SLC44A4', 'nc|ENSG00000204385|Q53GD3-4|SLC44A4', 'ENSG00000204385|ENST00000229729|SLC44A4'] 67103 8919 LSQILAGR True PC9_epitope_Rep2 856.5130510535199 856.51194993586 39.665 2 -0.01934110355058449 0.012275487789120042 0.1034974376772834 ['nc|ENSG00000133115|Q8TAV4-2|STOML3', 'ENSG00000133115|ENST00000379631|STOML3'] 104728 4288 SQVEGEHQL True PC9_epitope_Rep4 1025.47778774361 1025.4766899358601 22.904 2 -0.019378628747715725 0.012275487789120042 0.10356105792708796 ['ENSG00000117724|ENST00000366955|CENPF'] 88913 20282 QVFENFVQA True PC9_epitope_Rep1 1080.5240096600398 1080.52290993586 82.842 2 -0.019430474162992043 0.012275487789120042 0.10364900299049842 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'ENST00000531732.5_1_11:12183702-12229694:+|nuORF', 'MICAL2|p.G13W|1|0.56|ENSG00000133816|chr11:12162192-12162192|G/T|missense_variant', 'MICAL2|p.G13E|1|0.19|ENSG00000133816|chr11:12162193-12162193|G/A|missense_variant', 'nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 114842 19678 TQNDIISTL True PC9_epitope_Rep3 1003.51858992643 1003.51748993586 80.923 2 -0.0194310958480281 0.012275487789120042 0.10365005787704844 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 29740 18800 FVNDIFERI True PC9_epitope_Rep6 1151.59750895347 1151.59640993586 84.954 2 -0.01945063429520424 0.012275487789120042 0.10368321500891736 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 25350 8849 FEADPPGQV True H1975_Epitope_Rep1 958.4396113297399 958.4390649679301 38.959 1 -0.019463260550373607 0.012275487789120042 0.10370464607334999 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 679 17493 AATSVTFVGV True PC9_epitope_Rep6 950.5072969667399 950.50618993586 79.915 2 -0.019483468720627273 0.012275487789120042 0.10373895286793369 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF'] 109308 10675 TAVTVNQSL True PC9_epitope_Rep6 931.4974605590301 931.49636993586 51.878 2 -0.019483523972079742 0.012275487789120042 0.10373904667783182 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 39366 5246 HKFAGDKGYL True NCI_RA007_Epitope_Rep4 1134.5821932425 1134.58108993586 26.719 2 -0.019489654309406093 0.012275487789120042 0.10374945558543291 ['ENSG00000197747|ENST00000368811|S100A10', 'ENST00000478574.5_1_1:151956596-151958706:-|nuORF', 'ENST00000478348.1_1_1:151957748-151958706:-|nuORF'] 31 4462 AAAAPLGAR True PC9_epitope_Rep3 796.4555361774 796.45442993586 22.259 2 -0.019581817258574434 0.012275487789120042 0.10390603274850667 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 89212 13505 QVTNEFQTV True PC9_epitope_Rep4 1064.51383889916 1064.51274993586 59.843 2 -0.019596878891560924 0.012275487789120042 0.1039316373540658 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 118321 19488 TYMDRVFKQF True PC9_epitope_Rep1 1333.6488929033296 1333.64725490379 79.778 3 -0.01961721954804627 0.012275487789120042 0.10396622344073247 ['ENSG00000158201|ENST00000289119|ABHD3'] 130897 17936 VTDDLVCLVY True H1975_Epitope_Rep3 1138.55801221026 1138.55747496793 75.12 1 -0.019621349616933768 0.012275487789120042 0.10397324698387368 ['ENSG00000143742|ENST00000304786|SRP9'] 92120 18427 RLAVLFSGA True PC9_epitope_Rep5 932.5443511817999 932.54324993586 75.9 2 -0.019624138207552527 0.012275487789120042 0.10397798941890611 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7482995-7483061:+|nuORF', 'nc|ENSG00000129226|P34810-2|CD68', 'nc|ENSG00000129226|P34810-3|CD68'] 30794 16468 GANAILGVSL True NCI_RA007_Epitope_Rep2 913.5232813840499 913.52218993586 68.784 2 -0.01962438506795928 0.012275487789120042 0.10397840925117909 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENO3|p.F106L|1|0.52|ENSG00000108515|chr17:4953719-4953719|T/A|missense_variant', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 107000 10510 SVFAGVGER True PC9_epitope_Rep3 920.4715801643599 920.47048993586 45.364 2 -0.01964999018093335 0.012275487789120042 0.10402196215272232 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 95844 15349 RYKGPGFEYF True PC9_epitope_Rep2 1262.6084079903396 1262.60730993586 64.321 2 -0.01965119591138017 0.012275487789120042 0.10402401335779478 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 140773 7075 YSDGPNPEV True H1975_Epitope_Rep2 976.4137905047199 976.41324496793 32.143 1 -0.019675735601681277 0.012275487789120042 0.10406576693230744 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 108799 18764 SYTSGLETL True PC9_epitope_Rep3 969.4654917244101 969.46494496793 77.397 1 -0.01967632690802922 0.012275487789120042 0.10406677317161427 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 117031 6993 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 34.145 2 -0.01968078703048133 0.012275487789120042 0.10407436328761777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 122401 14026 VGDPSVHLL True PC9_epitope_Rep4 935.5076313199099 935.50652993586 61.863 2 -0.01970226723436139 0.012275487789120042 0.10411092329216749 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 42974 7500 IESRTLAIA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 33.799 2 -0.019729368468072883 0.012275487789120042 0.10415706364203205 ['ENSG00000147872|ENST00000276914|PLIN2'] 71799 6461 M[Oxidation]EGPTPVSA True H1975_Epitope_Rep2 903.4007836733099 903.40023496793 29.77 1 -0.01974553496009852 0.01229490547349382 0.104184594390004 ['ENSG00000198786|ENST00000361567|MT-ND5'] 106198 5965 STDSETLRY True H1975_Epitope_Rep2 1070.48801807414 1070.48747496793 27.927 1 -0.019748830627310573 0.01229490547349382 0.10419020739230114 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 68261 5145 LTEAPLNPK True NCI_RA007_Epitope_Rep3 981.5494961318899 981.54838993586 27.231 2 -0.019754797989292788 0.01229490547349382 0.10420037123374516 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 66156 16932 LSEPNIASI True PC9_epitope_Rep4 942.5022115863 942.50110993586 73.115 2 -0.019774865556137108 0.01229490547349382 0.10423455631573687 ['NOM1|p.M377I|1|0.3|ENSG00000146909|chr7:156954121-156954121|G/T|missense_variant'] 79249 6647 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 32.19 2 -0.019786999406779505 0.01229490547349382 0.10425523022853203 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 109540 18113 TDRQLFDTI True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 74.869 2 -0.019789786469787577 0.01229490547349382 0.10425997930183548 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 41678 17304 IAGPVLLI True H1975_Epitope_Rep1 794.5265758593399 794.5260249679301 72.02 1 -0.019800894718897316 0.01229490547349382 0.10427890897562049 ['ENSG00000243279|ENST00000553851|PRAF2'] 89962 4550 RDFEGKVV True NCI_RA007_Epitope_Rep5 948.5028802926398 948.50178993586 24.157 2 -0.01981785003737507 0.01229490547349382 0.10430780745738491 ['ENSG00000066379|ENST00000332435|POLR1H'] 45601 8555 IQVTKVTQV True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 42.674 2 -0.01987275740350727 0.012312726020320302 0.10440143052813386 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 134243 19043 VYMPDHSYVTI True PC9_epitope_Rep1 1323.61692406871 1323.6158299358601 78.039 2 -0.019881993387400744 0.012312726020320302 0.10441718482050677 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF'] 52822 10067 KPAEFTVDA True PC9_epitope_Rep5 976.4865615221598 976.48546993586 43.704 2 -0.01988631158063997 0.012312726020320302 0.10442455117039684 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 92408 17779 RLQELFAV True PC9_epitope_Rep5 974.5549158654998 974.55380993586 73.406 2 -0.01989184262656713 0.012312726020320302 0.10443398705518443 ['ENST00000340291.6_1_9:35812160-35812229:-|nuORF'] 105394 6586 SRSDSNFQV True PC9_epitope_Rep4 1038.47303671634 1038.47192993586 32.491 2 -0.019903254751195486 0.012312726020320302 0.10445345791084158 ['ENST00000505131.1_1_4:48384636-48389420:+|nuORF', 'ENSG00000109171|ENST00000264313|SLAIN2'] 84997 12955 QEFRFLPPP True NCI_RA007_Epitope_Rep4 1129.5920296502097 1129.59092993586 56.924 2 -0.019935230841005215 0.012312726020320302 0.10450802796860362 ['ENSG00000113369|ENST00000265138|ARRDC3'] 60341 9067 LGSLWQPDCR True NCI_RA007_Epitope_Rep1 1173.5600778989299 1173.5589899358602 39.272 2 -0.019940073216040428 0.012312726020320302 0.10451629369934465 ['ENST00000262494.12_3_16:56379319-56379799:+|nuORF'] 17232 15754 EHAEALLL True PC9_epitope_Rep1 894.4810822188999 894.48053496793 65.422 1 -0.01994427184439915 0.012312726020320302 0.10452346096152317 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 71764 4084 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 20.799 2 -0.01995841725539597 0.012312726020320302 0.10454761046136168 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 62940 18604 LLPEEWDEI True PC9_epitope_Rep2 1142.54955570154 1142.5484499358602 76.913 2 -0.019967506808407524 0.012312726020320302 0.10456313055222918 ['nc|ENSG00000151812|A4IF30-2|SLC35F4', 'ENSG00000151812|ENST00000556826|SLC35F4', 'nc|ENSG00000151812|A4IF30|SLC35F4'] 116517 18194 TTSDIDYAL True PC9_epitope_Rep5 997.46040634397 997.45985496793 74.993 1 -0.020005886025133104 0.012312726020320302 0.10462867994770457 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 45814 13732 ISDEGIAYL True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 57.959 1 -0.020021089073842917 0.012312726020320302 0.10465465399660241 ['ENSG00000163918|ENST00000296273|RFC4', 'nc|ENSG00000163918|P35249-2|RFC4', 'ENST00000494047.5_1_3:186509405-186522502:-|nuORF', 'ENST00000479307.5_1_3:186508099-186512490:-|nuORF'] 139993 21126 YQDPSVLYI True PC9_epitope_Rep2 1096.54407639828 1096.5429699358601 86.72 2 -0.02003086928227545 0.012312726020320302 0.10467136569758718 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 32120 13135 GETIFVTAP True NCI_RA007_Epitope_Rep5 933.48074786573 933.4801949679301 57.2 1 -0.020044263237569398 0.012312726020320302 0.10469425541125742 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 24092 17635 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5797699358602 75.856 2 -0.020046766921518838 0.012333986266870439 0.10469853450173928 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 133175 14057 VVRNEQVEI True PC9_epitope_Rep3 1084.58767254576 1084.58656993586 59.161 2 -0.020070756784212385 0.012349131903358361 0.10473954236405664 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 36912 21801 GVLPQLSMV True PC9_epitope_Rep5 942.5208388559 942.51974993586 88.889 2 -0.0200823417325969 0.012349131903358361 0.1047593496041902 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 7687 10971 ASLMHSFILK True NCI_RA007_Epitope_Rep4 1145.6267009067699 1145.62504490379 49.068 3 -0.020085346586451204 0.012349131903358361 0.10476448755955807 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 97912 4290 SEMRAPPAA True NCI_RA007_Epitope_Rep4 928.4436511643598 928.44254993586 22.835 2 -0.020111384555223048 0.012349131903358361 0.10480901707196573 ['ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF'] 38924 10924 HHGLLGGAL True PC9_epitope_Rep2 873.48208527841 873.48098993586 47.341 2 -0.020115496573144365 0.012349131903358361 0.10481605058840421 ['ENST00000464036.5_1_1:1190585-1197670:-|nuORF', 'nc|ENSG00000160087|Q8N2K1-2|UBE2J2', 'ENSG00000160087|ENST00000349431|UBE2J2', 'nc|ENSG00000160087|Q8N2K1-3|UBE2J2'] 77280 17058 NSDLNNLLF True H1975_Epitope_Rep1 1048.5189242796 1048.51837496793 71.038 1 -0.020142512044592574 0.012349131903358361 0.10486226838165555 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 78070 21056 NVVEALIAL True PC9_epitope_Rep6 940.5593325395998 940.55822993586 93.814 2 -0.020187938288484027 0.012349131903358361 0.10494001609719864 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 111120 13247 THEEGSYLF True PC9_epitope_Rep4 1081.47163973401 1081.4705499358602 58.854 2 -0.02025345653777298 0.012349131903358361 0.10505222440572096 ['ENSG00000182827|ENST00000366812|ACBD3'] 39457 6589 HLARLGAL True PC9_epitope_Rep6 849.5184707871299 849.51736993586 34.049 2 -0.020262193407302308 0.012349131903358361 0.1050671939022819 ['ENSG00000170128|ENST00000304244|GPR25'] 65833 15119 LSDLFSDDY True H1975_Epitope_Rep3 1073.45532096353 1073.4542299358602 63.554 2 -0.020276417441721234 0.012349131903358361 0.10509156821901498 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 140575 11047 YRQKQVVIL True PC9_epitope_Rep3 1145.6920780446499 1145.69044490379 47.486 3 -0.02027939581929143 0.012349131903358361 0.10509667248257833 ['ENSG00000143179|ENST00000367879|UCK2'] 85826 14556 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.51274993586 60.989 2 -0.02028134404811961 0.012349131903358361 0.10510001140104516 ['ENSG00000085872|ENST00000546361|CHERP'] 85923 8442 QHGGPAVAI True PC9_epitope_Rep3 848.4504507969599 848.44934993586 37.435 2 -0.020289247260115446 0.012349131903358361 0.10511355688402432 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 66668 9275 LSKTSVVDL True PC9_epitope_Rep6 960.54916177872 960.54806993586 45.83 2 -0.020300071098164202 0.012349131903358361 0.10513211012122976 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 75911 9525 NLQYNISRNT True NCI_RA007_Epitope_Rep2 1221.61019889549 1221.60910993586 41.664 2 -0.02030633779245025 0.012349131903358361 0.10514285299097398 ['ENST00000298105.7_1_13:103543811-103548031:+|nuORF', 'nc|ENSG00000250878|A6NDL7|METTL21EP'] 34028 8394 GLVEAAAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 37.215 1 -0.020363048222876268 0.012349131903358361 0.10524010634942742 ['ENSG00000204366|ENST00000375527|ZBTB12'] 73745 10301 NADHTTLLL True NCI_RA007_Epitope_Rep4 996.52400966004 996.5234649679301 46.478 1 -0.02040269509196105 0.012349131903358361 0.10530813550339367 ['VPS11|p.S379Dfs*2|1|0.05|ENSG00000160695|chr11:119081555-119081556|-/GACTGACC|frameshift_variant', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENSG00000160695|ENST00000621676|VPS11'] 106876 13787 SVDDTIVAL True NCI_RA007_Epitope_Rep3 931.4862271689899 931.48512993586 61.56 2 -0.020424874871212376 0.012349131903358361 0.10534620702430139 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 23636 17242 EWSPYTKIFQF True NCI_RA007_Epitope_Rep4 1444.7027022979998 1444.70160993586 74.653 2 -0.020448023300854955 0.012349131903358361 0.1053859517495371 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 62937 20726 LLPDYYLVTV True PC9_epitope_Rep6 1194.65362684726 1194.65252993586 92.483 2 -0.020464884934814277 0.012349131903358361 0.10541490911672054 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 6460 13282 APSGNFVAC True PC9_epitope_Rep3 864.37998827864 864.37888993586 56.123 2 -0.020465262991193976 0.012349131903358361 0.1054155584380892 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 29232 8565 FTVGEGIR True NCI_RA007_Epitope_Rep1 877.4657665079299 877.46466993586 37.318 2 -0.02047917574487188 0.012349131903358361 0.10543945593698004 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 108196 5256 SYGKQTNVL True NCI_RA007_Epitope_Rep3 1008.52400966004 1008.52290993586 27.678 2 -0.020521829492294533 0.012349131903358361 0.105512745128742 ['ENSG00000175336|ENST00000398189|APOF'] 17235 14807 EHAEALLL True PC9_epitope_Rep2 894.4810822188999 894.48053496793 62.22 1 -0.020530114720288244 0.012349131903358361 0.10552698533541122 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 26519 18457 FIGAGAATVGV True PC9_epitope_Rep2 961.5232813840499 961.52218993586 76.328 2 -0.020540934165571522 0.012369847689527579 0.10554558329207828 ['ENST00000497075.5_1_2:176043783-176046391:-|nuORF', 'ENST00000513781.5_1_17:46970480-46973128:+|nuORF', 'ENST00000502964.5_1_17:46971694-46973128:+|nuORF', 'ENSG00000159199|ENST00000393366|ATP5MC1', 'ENSG00000135390|ENST00000394349|ATP5MC2', 'ENSG00000154518|ENST00000284727|ATP5MC3', 'nc|ENSG00000135390|Q06055-3|ATP5MC2', 'nc|ENSG00000135390|Q06055-2|ATP5MC2'] 37532 19718 GVVFSVTTV True PC9_epitope_Rep4 907.5014833103099 907.50038993586 83.969 2 -0.02055285317520683 0.012369847689527579 0.1055660740497762 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENST00000489758.1_1_1:25072044-25124343:+|nuORF'] 16120 9276 EEALPVTTA True H1975_Epitope_Rep3 929.47057710485 929.46948993586 40.674 2 -0.020570524292080127 0.012369847689527579 0.10559645887956719 ['ENSG00000184897|ENST00000333762|H1-10'] 47290 23931 IVDPFQILV True PC9_epitope_Rep1 1042.60628273202 1042.6051899358602 96.853 2 -0.020657891736484545 0.01238283601341474 0.10574677600673822 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 23659 7652 EYAKIEETM True NCI_RA007_Epitope_Rep3 1112.5059766374 1112.5048699358601 37.223 2 -0.020679327937204506 0.01238283601341474 0.10578368074048199 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 105893 10873 SSQAPVIY True H1975_Epitope_Rep2 863.43888305375 863.43833496793 46.852 1 -0.020688589387901406 0.01238283601341474 0.10579962818011844 ['ENST00000520124.5_1_8:22005675-22011752:-|nuORF', 'nc|ENSG00000168481|Q8N145-2|LGI3', 'ENSG00000168481|ENST00000306317|LGI3'] 26620 22138 FIMEGGAMVL True PC9_epitope_Rep5 1066.5191246037398 1066.51802993586 90.189 2 -0.020690498459006695 0.01238283601341474 0.10580291565405953 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 114579 16088 TQDGNIYQL True PC9_epitope_Rep4 1050.4981888350198 1050.49767496793 69.818 1 -0.020692043744103075 0.01238283601341474 0.10580557673185703 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 109125 15407 TALREKLL True PC9_epitope_Rep6 942.5862159937799 942.58510993586 71.418 2 -0.02072325445921262 0.01238283601341474 0.1058593337975552 ['ENSG00000163060|ENST00000295201|TEKT4'] 34808 11002 GQIAGSTGL True PC9_epitope_Rep5 802.41848196234 802.41793496793 47.307 1 -0.020725070746180886 0.01238283601341474 0.10586246275643056 ['ENSG00000102243|ENST00000370634|VGLL1'] 21327 16811 ERFEIPIKV True PC9_epitope_Rep4 1129.6495445263297 1129.64788490379 72.635 3 -0.02073984249100613 0.01238283601341474 0.10588791283608819 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 42853 14958 IEQPTPFLP True H1975_Epitope_Rep1 1040.5542471591598 1040.55367496793 62.777 1 -0.02075060124957699 0.01238283601341474 0.10590645174142328 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 128311 7584 VPPPPPIAR True PC9_epitope_Rep4 942.56508662638 942.56398993586 36.552 2 -0.02082585843674532 0.01238283601341474 0.10603619578349155 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 27652 19436 FPFAPPAAA True PC9_epitope_Rep4 887.4541391950698 887.45304993586 82.874 2 -0.020828077113357293 0.01238283601341474 0.10604002252646019 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 9100 22389 AVIGGLVYL True PC9_epitope_Rep5 903.5429541994699 903.54184993586 91.122 2 -0.020832066126471236 0.01238283601341474 0.1060469029700902 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 103260 9246 SPLLEACEFLR True NCI_RA007_Epitope_Rep1 1276.64855855016 1276.64746993586 39.964 2 -0.020835982570435972 0.01238283601341474 0.10605365855371139 ['nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 138962 6165 YKKRLSVEL True NCI_RA007_Epitope_Rep4 1134.67609362734 1134.6749899358601 30.324 2 -0.020854308266768193 0.01238283601341474 0.1060852731509178 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 747 15606 AAVNVICEL True H1975_Epitope_Rep2 930.48445334718 930.48334993586 65.185 2 -0.02085761619989394 0.01238283601341474 0.10609098055412859 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 17619 7801 EHINSVSAM True PC9_epitope_Rep5 986.44913046762 986.44802993586 34.95 2 -0.02090154876019506 0.01238283601341474 0.10616680123953491 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 12065 16659 DHTLGNII True PC9_epitope_Rep3 881.46068112749 881.45958993586 69.214 2 -0.02091584968363458 0.01238283601341474 0.10619149074387607 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 29407 19454 FVDPVLNQL True PC9_epitope_Rep6 1043.56514619603 1043.56404993586 87.493 2 -0.020917221856248957 0.01238283601341474 0.106193859916039 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 26046 15113 FGIDRDAIAQA True PC9_epitope_Rep2 1175.59348620219 1175.5923899358602 63.389 2 -0.02091777805894011 0.01238283601341474 0.10619482025783283 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 108379 16691 SYLERHGLINF True PC9_epitope_Rep4 1347.6935345966297 1347.69187490379 72.176 3 -0.020920985783380724 0.01238283601341474 0.10620035884892366 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 36116 21326 GVAIPLPGV True PC9_epitope_Rep1 821.50108938749 821.5005449679301 86.861 1 -0.020941102771472868 0.01238283601341474 0.10623509839277169 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 100964 13783 SLFNTGFLK True NCI_RA007_Epitope_Rep4 1025.5545815123298 1025.5534899358602 60.239 2 -0.020953540110980058 0.01238283601341474 0.10625658020139503 ['ENSG00000121486|ENST00000367506|TRMT1L'] 111275 18709 THLLGVAL True PC9_epitope_Rep5 822.49633836022 822.49524993586 76.982 2 -0.020975353823535735 0.01238283601341474 0.10629426441118713 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 73487 19394 MVDGTLLLL True NCI_RA007_Epitope_Rep5 973.5518046310099 973.55125496793 81.484 1 -0.02098417614312322 0.01238283601341474 0.10630950809556669 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 117181 11188 TVLERVEGA True PC9_epitope_Rep1 972.5240096600398 972.52290993586 47.917 2 -0.02098609356237511 0.01238283601341474 0.1063128213238036 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 79482 6687 PAYHSSLMD True NCI_RA007_Epitope_Rep4 1019.43823143075 1019.43712993586 32.346 2 -0.020990987239782266 0.01238283601341474 0.10632127774875197 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 17464 10778 EHFDASHVAL True PC9_epitope_Rep4 1124.5250722892 1124.52343490379 49.217 3 -0.021031802597967206 0.01238283601341474 0.10639182667890491 ['ENSG00000164062|ENST00000296456|APEH'] 9194 4993 AVLTHSGFPAK True NCI_RA007_Epitope_Rep3 1126.6134933707797 1126.6118549037901 26.638 3 -0.021041179200008257 0.01238283601341474 0.10640803876675572 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 28791 18664 FSTTVIQNV True PC9_epitope_Rep5 1007.5287606873098 1007.52766993586 76.814 2 -0.021054972224857044 0.01238283601341474 0.10643189003274774 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.D78E|1|0.25|ENSG00000100554|chr14:67350616-67350616|G/C|missense_variant'] 44075 22598 IILPEDIEL True PC9_epitope_Rep3 1053.59577761797 1053.59468993586 92.193 2 -0.021058194146133927 0.01238283601341474 0.10643746201550501 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 30211 14043 FYSGSPTSY True PC9_epitope_Rep1 1007.4236269124299 1007.42252993586 58.854 2 -0.021060097985883198 0.01238283601341474 0.10644075460932433 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1'] 97661 15345 SEGSPLVVLP True H1975_Epitope_Rep2 996.54916177872 996.54861496793 64.183 1 -0.02108273725144082 0.01238283601341474 0.10647991364680398 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'KIF5B-MET|1|fusion'] 95353 13286 RVVDELDNQM True PC9_epitope_Rep3 1217.57103650545 1217.56992993586 56.139 2 -0.021104653660455684 0.012400868275699027 0.10651783217210832 ['nc|ENSG00000085231|Q9Y3D8-2|AK6', 'ENSG00000085231|ENST00000380822|AK6'] 46175 20196 ISLPLPNFSSL True H1975_Epitope_Rep1 1186.65977485686 1186.6586699358602 84.033 2 -0.021144243400078654 0.012400868275699027 0.10658635255300865 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 38133 5780 HCWEVMLP True H1975_Epitope_Rep2 1013.4462940166499 1013.44518993586 27.227 2 -0.02116482245830276 0.012400868275699027 0.10662198242706782 ['ENST00000373242.6_1_10:71911919-71912228:-|nuORF'] 32187 5521 GEVTNVTTA True NCI_RA007_Epitope_Rep5 890.4345259493 890.43342993586 27.923 2 -0.021183484242361092 0.012400868275699027 0.10665430015685345 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 107288 23539 SVLDGLLYV True PC9_epitope_Rep5 977.54334812229 977.54224993586 95.527 2 -0.021213421443619287 0.012400868275699027 0.1067061588225847 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 106936 20955 SVDSLTFSV True PC9_epitope_Rep5 953.47057710485 953.47002496793 85.663 1 -0.02121713513653909 0.012400868275699027 0.10671259311666569 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 91754 7194 RKFLDGNEL True NCI_RA007_Epitope_Rep3 1090.5771078620598 1090.5760099358602 35.41 2 -0.021223683379564724 0.012400868275699027 0.10672393918921326 ['ENSG00000213719|ENST00000375784|CLIC1'] 71771 4708 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 23.201 2 -0.021240787180416693 0.012400868275699027 0.1067535788326277 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 6485 6625 APSPATAAATA True PC9_epitope_Rep2 927.4661604307499 927.46506993586 30.894 2 -0.021242727953498214 0.012400868275699027 0.10675694242275519 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 32871 14463 GHSEVLPAAL True PC9_epitope_Rep1 992.5290950404799 992.52798993586 60.455 2 -0.021244825808255912 0.012400868275699027 0.10676057833922682 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 89485 16767 QYGGDLTNTF True PC9_epitope_Rep6 1114.49310345458 1114.49200993586 76.987 2 -0.021245871083763173 0.012400868275699027 0.1067623900012082 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 108150 21710 SYFPKILTF True PC9_epitope_Rep3 1114.60628273202 1114.6051899358602 88.8 2 -0.021248155172455676 0.012400868275699027 0.10676634883934119 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 1090 10060 AEAIRILAA True NCI_RA007_Epitope_Rep4 926.5549158654999 926.55380993586 45.541 2 -0.021269176554935158 0.012400868275699027 0.10680278853534948 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 21816 13028 ERYPYPVRL True PC9_epitope_Rep2 1191.6400424717897 1191.63838490379 55.393 3 -0.021325629770471914 0.012442782541422217 0.10690069180987913 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 8218 14177 [Acetylation]-ATFVELSTK True H1975_Epitope_Rep3 1036.54407671458 1036.54357496793 59.867 1 -0.02134951141071246 0.012442782541422217 0.10694212752871658 ['nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000198074|ENST00000359579|AKR1B10', 'AKR1B10|p.T244Nfs*29|1|0.24|ENSG00000198074|chr7:134537643-134537644|-/A|frameshift_variant'] 55272 17213 LADPSAFVAA True PC9_epitope_Rep6 960.4916469025999 960.49054993586 78.799 2 -0.021373627118223337 0.012442782541422217 0.10698398100198456 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 90697 2761 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 14.648 3 -0.021383962721528316 0.012442782541422217 0.10700192230574689 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 109997 8901 TEILKSVVA True H1975_Epitope_Rep3 958.5698972232999 958.56880993586 39.235 2 -0.021414681090389246 0.012506984140628358 0.1070552582003034 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 113734 12913 TMAKESSIIGV True PC9_epitope_Rep2 1134.59546034814 1134.5943699358602 54.966 2 -0.021428236737886693 0.012526051178480116 0.10707880072544612 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 115543 5213 TRSITNTTV True PC9_epitope_Rep2 991.52982331647 991.52872993586 25.442 2 -0.021452326646112428 0.012526051178480116 0.10712064755685619 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.S268L|1|0.19|ENSG00000168066|chr11:64769106-64769106|G/A|missense_variant'] 79480 7133 PAYHSSLMD True NCI_RA007_Epitope_Rep1 1019.43823143075 1019.43712993586 31.735 2 -0.021468032176849283 0.012526051178480116 0.10714793608409455 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 81802 16423 PLPPPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 75.575 2 -0.021473558327386545 0.012526051178480116 0.10715753900963636 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 131073 9250 VTDSTQVNV True PC9_epitope_Rep5 961.47163973401 961.47054993586 40.527 2 -0.02149619801121932 0.012526051178480116 0.10719688694967032 ['ENST00000420642.1_7:74765936-74789271:+|nuORF', 'nc|ENSG00000274523|Q96I51-3|RCC1L', 'ENSG00000274523|ENST00000610322|RCC1L', 'nc|ENSG00000274523|Q96I51-2|RCC1L'] 7193 10034 AQYEHDLEVA True PC9_epitope_Rep4 1173.5302172392899 1173.52912993586 46.259 2 -0.021505945039536886 0.012526051178480116 0.10721383053296352 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 114531 12213 TQAPGNPVL True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 51.964 2 -0.021517462050966975 0.012526051178480116 0.10723385340005406 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 74496 9623 NFGEDMDDER True PC9_epitope_Rep5 1226.4509809424198 1226.44988993586 41.98 2 -0.02153560294933234 0.012526051178480116 0.1072653976186499 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 92815 6335 RPAPVAVAA True PC9_epitope_Rep5 850.5024863698198 850.50138993586 29.342 2 -0.021551946758707214 0.012526051178480116 0.10729382264683035 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 69103 12687 LTRGDLWVS True PC9_epitope_Rep3 1045.55564414149 1045.5545499358602 53.824 2 -0.021579685640116468 0.012542685938875883 0.10734207819853744 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 3932 15120 AHDDSVMYL True PC9_epitope_Rep1 1049.44879611445 1049.4476899358601 62.978 2 -0.021636131573241044 0.012542685938875883 0.10744032137463265 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 71769 4523 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 22.509 2 -0.02165395852372594 0.012542685938875883 0.10747136219819006 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 44953 16556 IPAALPTQ True PC9_epitope_Rep5 809.46470387877 809.4641549679301 68.687 1 -0.021655121854957264 0.012542685938875883 0.10747338804790454 ['nc|ENSG00000108509|O94983-6|CAMTA2'] 108159 17995 SYFSGSHMF True PC9_epitope_Rep5 1061.4276667470501 1061.42656993586 74.234 2 -0.021672311852808795 0.012542685938875883 0.10750332625012837 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 121824 16868 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 69.893 2 -0.021673807615270817 0.012542685938875883 0.10750593156016988 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 107721 9618 SVSDLFNTK True NCI_RA007_Epitope_Rep3 1009.50802524273 1009.50692993586 44.914 2 -0.02168866539094631 0.012542685938875883 0.1075318131895415 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 128480 6753 VPSLQGEKA True PC9_epitope_Rep3 927.5025459394699 927.50144993586 30.998 2 -0.021700884059027117 0.012542685938875883 0.10755310093241842 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'MAX|p.R60del|1|0.54|ENSG00000125952|chr14:65078028-65078030|CCG/-|inframe_deletion'] 73915 16675 NAYTGIVLL True H1975_Epitope_Rep3 962.54368247546 962.54258993586 69.661 2 -0.021722518258483918 0.012542685938875883 0.10759080007737684 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 89066 13881 QVMQGMGVSA True PC9_epitope_Rep1 1006.4575869763398 1006.45648993586 58.233 2 -0.021726668265129926 0.012542685938875883 0.10759803283873243 ['ENSG00000169813|ENST00000682386|HNRNPF'] 103785 15841 SPVVPQISA True PC9_epitope_Rep2 896.4967322830399 896.49618496793 66.191 1 -0.02172971691605674 0.012542685938875883 0.10760334634379154 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 8229 7382 ATGDVALLR True NCI_RA007_Epitope_Rep3 914.5185303567799 914.51742993586 36.164 2 -0.021734277777598114 0.012542685938875883 0.10761129583568804 ['ENSG00000100605|ENST00000267615|ITPK1'] 40074 7437 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 37.835 2 -0.02174254404443268 0.012542685938875883 0.10762570484333553 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 77307 10720 NSDPGLAVGY True H1975_Epitope_Rep2 991.46107505031 991.45996993586 46.261 2 -0.021820173523792 0.012542685938875883 0.10776108864298041 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 17228 11507 EGYADKNLIA True PC9_epitope_Rep5 1092.54513902744 1092.5440499358601 49.258 2 -0.021834666027409643 0.012542685938875883 0.10778637663418715 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000466798.1_1_7:99013792-99015269:+|nuORF'] 103630 5298 SPTKNNIAV True PC9_epitope_Rep5 942.5134449763399 942.51234993586 25.392 2 -0.021845868889826515 0.012542685938875883 0.10780592742382017 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 111442 7511 THTPSGLTV True PC9_epitope_Rep4 911.47124581119 911.47014993586 36.258 2 -0.021852859314059232 0.012542685938875883 0.10781812811449464 ['ENSG00000116685|ENST00000376572|KIAA2013', 'nc|ENSG00000116685|Q8IYS2-2|KIAA2013'] 43943 12319 IIDNNDTQL True PC9_epitope_Rep2 1044.50875351872 1044.5076499358602 52.697 2 -0.02185953566632633 0.012542685938875883 0.1078297815604657 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 104755 18868 SQVPHLPVL True PC9_epitope_Rep5 988.5705659296399 988.56946993586 77.594 2 -0.021885492125155413 0.012559307842590009 0.10787509659490364 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 63218 21254 LLSEDFVSV True PC9_epitope_Rep5 1007.5175272972699 1007.5169749679301 86.804 1 -0.021891960953028155 0.012559307842590009 0.1078863920486999 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF'] 140156 19835 YQSGFSLV True PC9_epitope_Rep3 899.4388830537499 899.43833496793 81.53 1 -0.021896625821185307 0.012559307842590009 0.10789453806634167 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'ENST00000587856.1_1_17:43311355-43318139:+|nuORF'] 42496 6123 IEEIHSVSA True H1975_Epitope_Rep3 983.49237517859 983.49126993586 28.564 2 -0.021913357934733833 0.012559307842590009 0.10792376009489214 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 34804 9998 GQHPNIITL True NCI_RA007_Epitope_Rep4 991.5450794577899 991.5445349679301 45.302 1 -0.021915542761083175 0.012559307842590009 0.10792757623096658 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 137644 11559 YEIAEGISA True H1975_Epitope_Rep3 951.4549270407099 951.45382993586 49.591 2 -0.02197423183220004 0.012559307842590009 0.10803012172312382 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 8892 20671 AVFPSIVG True PC9_epitope_Rep5 788.4432401582 788.44269496793 84.566 1 -0.022003854742355656 0.012559307842590009 0.10808190721324291 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 103491 8064 SPQQPGLSA True PC9_epitope_Rep1 883.4399456829099 883.43884993586 35.842 2 -0.02202552471768655 0.012559307842590009 0.10811980092321954 ['ENSG00000170498|ENST00000367194|KISS1'] 23722 19808 EYFKSFNF True PC9_epitope_Rep2 1080.4916469026 1080.4905499358601 81.581 2 -0.02205733565023189 0.012559307842590009 0.10817544499421897 ['ENSG00000151470|ENST00000425929|C4orf33'] 34749 6057 GQFDHGSGSL True NCI_RA007_Epitope_Rep5 1003.4359229316299 1003.43482993586 29.98 2 -0.022060862625956086 0.012559307842590009 0.1081816156788003 ['THRAP3|p.T757Rfs*5|1|0.18|ENSG00000054118|chr1:36296736-36296737|AC/-|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 36703 16329 GVISKTFQL True PC9_epitope_Rep4 991.57023157647 991.56912993586 70.772 2 -0.02208105848638269 0.012559307842590009 0.1082169545410412 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 49899 17025 KIIDIFTTL True NCI_RA007_Epitope_Rep4 1062.6324974798601 1062.6314099358601 73.77 2 -0.022097271911264923 0.012559307842590009 0.10824533085657731 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 86142 17628 QIDGTLSTI True PC9_epitope_Rep5 946.49712620586 946.49602993586 72.817 2 -0.02210878392910642 0.012559307842590009 0.10826548210748788 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 81805 11981 PLPPPPPPP True PC9_epitope_Rep2 907.51673945163 907.51564993586 51.405 2 -0.02211004476375191 0.012559307842590009 0.1082676893020668 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A', 'nc|ENSG00000146083|Q7L0R7-2|RNF44', 'nc|ENSG00000110076|P58401|NRXN2', 'ENSG00000204334|ENST00000697325|ERICH2', 'ENSG00000146083|ENST00000274811|RNF44', 'ENST00000508096.1_1_10:126605730-126631034:+|nuORF', 'JUND|p.G86Sfs*101|1|0.19|ENSG00000130522|chr19:18281196-18281229|TCAGCAGCCCCAGGTCGGGAGAGGCGAGCAGGCC/-|frameshift_variant', 'ENST00000508478.1_1_5:175957081-175957609:-|nuORF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'ENSG00000100312|ENST00000216139|ACR', 'nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000138771|ENST00000296043|SHROOM3', 'ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B', 'ENSG00000152217|ENST00000649279|SETBP1', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENST00000596700.5_1_19:50084718-50093643:+|nuORF', 'ENST00000597121.5_1_19:50086773-50093643:+|nuORF', 'ENSG00000126460|ENST00000246794|PRRG2', 'ENSG00000259956|ENST00000563281|RBM15B'] 97844 11621 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42760993586 52.833 2 -0.022150618885401936 0.012559307842590009 0.10833873473808704 ['ENSG00000126247|ENST00000246533|CAPNS1'] 30673 5808 GALALEEK True PC9_epitope_Rep6 829.4545331178899 829.45342993586 30.546 2 -0.02216534963600901 0.012559307842590009 0.10836453654625935 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 114543 15198 TQAPPNVVL True PC9_epitope_Rep4 937.5232813840499 937.52218993586 66.382 2 -0.022178010780748 0.012559307842590009 0.10838671680866677 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 5398 17287 ALSSALLS True PC9_epitope_Rep2 760.4330693973201 760.43252496793 71.753 1 -0.022191654234329453 0.012559307842590009 0.10841062153305178 ['ENST00000373095.5_1_9:130703347-130703578:-|nuORF'] 74938 12570 NHLGGGAVVL True PC9_epitope_Rep5 935.51886470995 935.51776993586 53.35 2 -0.0222124944794532 0.012580236577145187 0.10844714301446898 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 110296 7168 TESQANVVV True H1975_Epitope_Rep2 945.4767251144499 945.47562993586 32.505 2 -0.022237266221208144 0.012580236577145187 0.10849056563450046 ['ENSG00000100219|ENST00000344347|XBP1'] 98302 5311 SEVQSTVEA True H1975_Epitope_Rep1 948.4400052525599 948.43890993586 25.491 2 -0.02224162041555835 0.01260062251797789 0.10849819942121118 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 44467 19746 ILLAELEQLK True PC9_epitope_Rep4 1168.7067250492798 1168.70562993586 84.077 2 -0.02225475982950183 0.01260062251797789 0.10852123779848873 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 21392 6134 ERIGVDHVA True PC9_epitope_Rep5 994.5195929859399 994.51848993586 28.58 2 -0.0222676608826781 0.01260062251797789 0.10854386162544985 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000468499.5_1_7:99688666-99688864:+|nuORF'] 105145 16192 SRFPEALRL True PC9_epitope_Rep1 1087.61382772395 1087.6127299358602 67.099 2 -0.022289609070921035 0.01260062251797789 0.10858235859791827 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 22302 9799 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 42.678 2 -0.0224017154054972 0.01262046317958404 0.1087791438651436 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 133967 17979 VYINTAQEF True PC9_epitope_Rep2 1083.5236753068698 1083.52256993586 74.46 2 -0.022410181451356537 0.01262046317958404 0.10879401498754347 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 39949 11947 HPKYSDMIVA True PC9_epitope_Rep1 1159.56957995347 1159.56848993586 50.82 2 -0.022439695348895488 0.01262046317958404 0.108845869241199 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 108249 16381 SYIEHIFEI True NCI_RA007_Epitope_Rep1 1149.57062549929 1149.57007496793 67.832 1 -0.02245610830364626 0.01262046317958404 0.10887471347964686 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 2914 7534 AEYINEAAA True NCI_RA007_Epitope_Rep4 950.4345259492999 950.43342993586 35.625 2 -0.02247381902599232 0.01262046317958404 0.10890584451936185 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 39152 7034 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.54013490379 34.306 3 -0.022486451615917377 0.01262046317958404 0.1089280533331572 ['ENSG00000156482|ENST00000287038|RPL30'] 74184 8971 NEEMSGLPA True H1975_Epitope_Rep2 946.4065969492998 946.40604496793 39.461 1 -0.02252719762476913 0.012659585881343204 0.10899970908091798 ['ENSG00000197601|ENST00000354817|FAR1'] 28958 13196 FTDTSLMY True H1975_Epitope_Rep2 976.42118438428 976.42063496793 55.884 1 -0.02256107104990511 0.012659585881343204 0.10905930423284432 ['nc|ENSG00000177426|Q15583-4|TGIF1', 'ENSG00000177426|ENST00000343820|TGIF1', 'nc|ENSG00000177426|Q15583-3|TGIF1', 'nc|ENSG00000177426|Q15583|TGIF1'] 70805 15432 LYAPYSTHF True PC9_epitope_Rep4 1097.51819600361 1097.5170899358602 67.293 2 -0.022615066879598522 0.012659585881343204 0.10915434957206831 ['ENSG00000013588|ENST00000014914|GPRC5A'] 60536 15910 LHDITVPL True PC9_epitope_Rep4 906.51746772762 906.51636993586 69.125 2 -0.02262772595104012 0.012659585881343204 0.1091766410244011 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000504058.1_1_5:6377277-6378620:-|nuORF'] 137696 23840 YEKKPKKQKRR True PC9_epitope_Rep2 1487.9048647755496 1487.90320490379 97.171 3 -0.022648306701271707 0.012659585881343204 0.10921288872270428 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 8290 15186 ATIIDILTK True NCI_RA007_Epitope_Rep2 986.60119735158 986.6006449679301 63.762 1 -0.02264912948445084 0.012659585881343204 0.10921433802137447 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 87289 13779 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.5072699358602 58.02 2 -0.022686218969325062 0.012659585881343204 0.10927968381160724 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 57552 7286 LEDRPANLP True H1975_Epitope_Rep3 1023.53490869691 1023.53380993586 33.001 2 -0.02268737620742306 0.012659585881343204 0.10928172312829809 ['nc|ENSG00000132405|Q9P2M4-2|TBC1D14', 'ENSG00000132405|ENST00000409757|TBC1D14'] 71800 6603 M[Oxidation]EGPTPVSA True H1975_Epitope_Rep2 903.4007836733099 903.40023496793 30.309 1 -0.022699267835516193 0.012659585881343204 0.10930268044733879 ['ENSG00000198786|ENST00000361567|MT-ND5'] 134782 17277 VYTVVDEMF True NCI_RA007_Epitope_Rep5 1101.5052483614097 1101.5041499358601 73.23 2 -0.022699425750851623 0.012659585881343204 0.10930295877007278 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 138104 13348 YGGPVGAGI True PC9_epitope_Rep4 789.4021036222099 789.4015549679301 59.245 1 -0.022739196375891776 0.012659585881343204 0.10937306975803099 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 120469 13249 VEESALPSA True PC9_epitope_Rep5 901.4392769765699 901.43816993586 55.972 2 -0.02275599799457967 0.012659585881343204 0.1094026986526232 ['ENSG00000122299|ENST00000355758|ZC3H7A'] 48530 19306 KALDGFVMV True PC9_epitope_Rep2 978.5208388558999 978.51974993586 79.635 2 -0.022804522415099268 0.012659585881343204 0.10948830127319176 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 65091 23512 LQLSLPLFL True PC9_epitope_Rep4 1042.64266824074 1042.6420749679298 98.742 1 -0.022817785329719835 0.012659585881343204 0.10951170684269772 ['ENST00000495882.1_1_7:99764639-99764801:-|nuORF'] 36301 7939 GVEGAIHA True PC9_epitope_Rep5 752.3817025308 752.38060993586 35.477 2 -0.022828984055925202 0.012680498637543716 0.10953147242621797 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 133748 10863 VYEDQVGKF True PC9_epitope_Rep4 1083.5236753068698 1083.52256993586 49.547 2 -0.022874407267486734 0.012680498637543716 0.10961166968099427 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 133619 15965 VYADQPHIF True PC9_epitope_Rep5 1088.52909504048 1088.5279899358602 66.399 2 -0.022903496632435162 0.012701137095043983 0.10966305049068722 ['ENSG00000100439|ENST00000428304|ABHD4'] 70501 11112 LVVSTQTALA True NCI_RA007_Epitope_Rep2 1001.5757108797299 1001.5746099358599 47.803 2 -0.022938220878882025 0.012701137095043983 0.10972440662025543 ['CON__P02769'] 47252 14307 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 60.035 2 -0.0229392611928866 0.012701137095043983 0.10972624518250755 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 96077 17851 RYLTVAAVF True PC9_epitope_Rep6 1038.5862159937797 1038.5851099358601 81.292 2 -0.022990165065953836 0.012742679395044514 0.1098162350527933 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 130308 9266 VSHVLAAL True NCI_RA007_Epitope_Rep4 808.4806882960798 808.47958993586 42.493 2 -0.02301582042733236 0.012742679395044514 0.1098616094498544 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000486788.2_1_9:35704327-35706084:-|nuORF'] 593 9313 AARLPLDAA True PC9_epitope_Rep6 896.5079656730799 896.50686993586 45.99 2 -0.023028012280977637 0.012742679395044514 0.10988317677776695 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 108469 17629 SYLTSASSL True PC9_epitope_Rep3 927.45492704071 927.45382993586 73.002 2 -0.023051096179905986 0.012742679395044514 0.10992402030529935 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 5273 4174 ALQASALK True NCI_RA007_Epitope_Rep5 800.47560291564 800.4745099358599 22.579 2 -0.023053660539745915 0.012742679395044514 0.10992855822327463 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 34911 15020 GQMIFAQAL True NCI_RA007_Epitope_Rep3 977.5004377644899 977.49934993586 66.544 2 -0.023112868307628993 0.012762215263180473 0.11003336985959827 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 42767 22147 IEMEQSILL True PC9_epitope_Rep2 1074.5630975907 1074.56200993586 90.671 2 -0.023127726877930632 0.012762215263180473 0.11005968413366854 ['DNM1L|p.R263Lfs*23|1|0.29|ENSG00000087470|chr12:32720710-32720722|CGTGATGAGTATG/-|frameshift_variant'] 107999 19163 SWPEGHFATI True PC9_epitope_Rep1 1143.53490869691 1143.53380993586 78.505 2 -0.02313961965404247 0.012762215263180473 0.11008074925169854 ['ENSG00000100591|ENST00000216479|AHSA1'] 8880 14240 AVFPSIVG True H1975_Epitope_Rep1 788.4432401582 788.44269496793 59.955 1 -0.023148151179781314 0.012762215263180473 0.11009586250497051 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 77864 24294 NVFFGSIWL True PC9_epitope_Rep5 1081.5596668927699 1081.55856993586 98.47 2 -0.0231584337262975 0.012762215263180473 0.11011407957576157 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 38182 5865 HDPSAVAV True PC9_epitope_Rep1 794.3922672145001 794.39116993586 27.376 2 -0.02316524718115532 0.012762215263180473 0.1101261518083603 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 34773 10197 GQFTGSTGV True PC9_epitope_Rep5 852.3977465177599 852.39664993586 44.212 2 -0.02317476307448356 0.012762215263180473 0.11014301385255272 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 35702 22287 GTFDIFYTA True PC9_epitope_Rep2 1033.4756624852898 1033.47507496793 91.205 1 -0.02321215884666312 0.012778456722626015 0.11020929642338433 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 71207 16537 LYPDHFHLL True PC9_epitope_Rep6 1153.59202965021 1153.5903749037902 76.049 3 -0.023219247953658963 0.012778456722626015 0.1102218647806666 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 73474 17729 MVDESGLWAVY True H1975_Epitope_Rep2 1268.5747249035599 1268.57362993586 73.516 2 -0.023222380489748923 0.012778456722626015 0.11022741881265229 ['ENSG00000105088|ENST00000264833|OLFM2', 'nc|ENSG00000130558|Q99784-5|OLFM1', 'nc|ENSG00000130558|Q99784-3|OLFM1', 'ENSG00000130558|ENST00000371793|OLFM1'] 45602 22117 IQVWLYEQV True PC9_epitope_Rep5 1176.6179100448799 1176.6168099358601 90.107 2 -0.02327507002717612 0.012778456722626015 0.11032086785693986 ['ENSG00000182004|ENST00000414487|SNRPE', 'ENST00000338402.6_1_16:20250446-20250542:-|nuORF'] 71732 10181 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42662993586 44.207 2 -0.023296544502856363 0.012778456722626015 0.11035897062976345 ['ENSG00000026025|ENST00000544301|VIM'] 116513 17809 TTSDIDYAL True PC9_epitope_Rep2 997.46040634397 997.45985496793 73.795 1 -0.023301510476646123 0.012778456722626015 0.11036778322561415 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 128686 8435 VPVSLKEA True PC9_epitope_Rep3 841.49091862661 841.48982993586 37.409 2 -0.02331527056883279 0.012778456722626015 0.11039220443128754 ['ENSG00000115306|ENST00000356805|SPTBN1'] 32481 16784 GGDDSFNTF True PC9_epitope_Rep2 958.3668403123 958.36574993586 69.808 2 -0.023316873296029644 0.012778456722626015 0.11039504917645261 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 25421 12525 FEDGSQLVV True H1975_Epitope_Rep2 992.4814761417199 992.48036993586 53.272 2 -0.023321340502700894 0.012778456722626015 0.11040297847594008 ['ENSG00000066135|ENST00000372396|KDM4A', 'nc|ENSG00000066135|O75164-2|KDM4A'] 70202 14525 LVQGELVTA True PC9_epitope_Rep1 928.5229470308799 928.52184993586 60.696 2 -0.023339492746795257 0.012778456722626015 0.11043520289138327 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1'] 34816 19135 GQIEVVPEV True PC9_epitope_Rep2 968.5178616504398 968.51731496793 78.973 1 -0.023347731073304154 0.012778456722626015 0.11044983001711887 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant', 'PHF3|p.E778Ffs*10|1|0.06|ENSG00000118482|chr6:63691878-63691879|-/TTTATCCCTTTTTTTAACAA|frameshift_variant', 'PHF3|p.K817Wfs*8|1|0.09|ENSG00000118482|chr6:63691995-63691996|-/TGGAAAACAG|frameshift_variant'] 72007 6627 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39420993586 30.399 2 -0.023361231625366456 0.012778456722626015 0.11047380317698326 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 87845 13339 QRGPPIIL True PC9_epitope_Rep4 892.5494365622399 892.54832993586 59.208 2 -0.023369501421904557 0.012778456722626015 0.1104884898156471 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 76363 8511 NPYYGGESA True PC9_epitope_Rep2 956.3875757568799 956.38646993586 38.101 2 -0.023389131935873424 0.012778456722626015 0.11052335791204153 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 6533 10469 APTLPGSAA True PC9_epitope_Rep5 783.41266830591 783.41211496793 45.255 1 -0.023407902348765493 0.012778456722626015 0.11055670556887036 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 114666 22084 TQFADMISL True PC9_epitope_Rep3 1024.4899326504399 1024.4888299358602 90.242 2 -0.02340884841357344 0.012778456722626015 0.11055838654334935 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 54626 9470 KYLEERAMRQF True PC9_epitope_Rep4 1469.74491854649 1469.74327490379 44.034 3 -0.023466517150153077 0.012778456722626015 0.110660886935801 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 96448 9082 SAAHAIVSV True PC9_epitope_Rep5 853.46576650793 853.46466993586 39.881 2 -0.023475847520075893 0.012778456722626015 0.11067747705416178 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 59162 17632 LFAGAEVIL True H1975_Epitope_Rep2 931.53786881903 931.53676993586 73.137 2 -0.023476696117739886 0.012778456722626015 0.11067898601371269 ['ENSG00000181958|ENST00000641526|OR4A15', 'nc|ENSG00000181958|Q8NGL6|OR4A15'] 505 6606 AAPAEEPAAAA True PC9_epitope_Rep3 967.4610750503098 967.45996993586 30.435 2 -0.02352190122059778 0.012799073835863133 0.11075938988858652 ['ENSG00000277443|ENST00000612661|MARCKS'] 125318 6719 VIPELNGK True NCI_RA007_Epitope_Rep4 868.50181766348 868.50072993586 32.468 2 -0.02352755079066755 0.012799073835863133 0.1107694413797892 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 32050 6858 GERIPDVAA True NCI_RA007_Epitope_Rep5 926.4821448480599 926.48104993586 33.063 2 -0.023554563244362007 0.012799073835863133 0.11081750979174518 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 67449 10521 LSSQVGLTSV True PC9_epitope_Rep1 989.5393253710099 989.53822993586 45.36 2 -0.02359649710111141 0.012815841923662159 0.11089215995032663 ['nc|ENSG00000054523|O60333-3|KIF1B', 'KIF1B|p.E545*|1|0.07|ENSG00000054523|chr1:10295126-10295127|-/T|frameshift_variant', 'nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 111654 21803 TIEDGIFEV True PC9_epitope_Rep5 1021.4967918526899 1021.49568993586 88.897 2 -0.023611223683371017 0.012815841923662159 0.11091838448052609 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 74 18728 AAAGVFALL True NCI_RA007_Epitope_Rep4 831.4854393233499 831.48489496793 81.025 1 -0.023618105029466537 0.012815841923662159 0.11093064002085676 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 48906 15172 KEDPFVFIP True H1975_Epitope_Rep1 1090.5698972233 1090.5688099358601 63.619 2 -0.02362074896446923 0.012815841923662159 0.11093534907123835 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 70793 20140 LYAPTILLW True NCI_RA007_Epitope_Rep3 1088.6270181766 1088.62592993586 87.767 2 -0.023621837926261623 0.012815841923662159 0.11093728863657545 ['ENSG00000081051|ENST00000395792|AFP', 'AFP|p.P171H|1|0.29|ENSG00000081051|chr4:73442325-73442325|C/A|missense_variant', 'AFP|p.A182G|1|0.38|ENSG00000081051|chr4:73442358-73442358|C/G|missense_variant'] 31648 9893 GEFQSFSSA True NCI_RA007_Epitope_Rep3 958.4032258210199 958.40212993586 45.993 2 -0.023630713596871935 0.012815841923662159 0.11095309811459055 ['ENSG00000112936|ENST00000313164|C7', 'C7|p.R48Qfs*21|1|0.16|ENSG00000112936|chr5:40934328-40934329|CG/-|frameshift_variant'] 109723 3439 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 18.017 2 -0.023652919840145493 0.012815841923662159 0.11099265919282408 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 7260 17125 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.52387496793 70.892 1 -0.02370057417996104 0.012815841923662159 0.11107759049370808 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 72211 13791 MHAETAFESL True PC9_epitope_Rep6 1134.5015599633 1134.50046993586 64.846 2 -0.02370895981068757 0.012815841923662159 0.11109254042579585 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 133177 11636 VVRNEQVEI True PC9_epitope_Rep6 1084.58767254576 1084.58656993586 55.879 2 -0.02372406086616476 0.012815841923662159 0.11111946623018171 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 124901 7172 VHPPPTTTY True PC9_epitope_Rep3 1011.5025459394701 1011.50144993586 32.599 2 -0.02373200182812306 0.012815841923662159 0.11113362714446033 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 39157 6596 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.54013490379 34.078 3 -0.023742334728279364 0.012815841923662159 0.1111520554519239 ['ENSG00000156482|ENST00000287038|RPL30'] 87508 4839 QQHDVQEL True PC9_epitope_Rep6 995.46722305991 995.46612993586 26.119 2 -0.023749613663985283 0.012815841923662159 0.11116503843536063 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 130460 16932 VSPASFENV True PC9_epitope_Rep5 948.45526139388 948.45416993586 70.145 2 -0.023755380459666138 0.012815841923662159 0.11117532507041489 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 98105 13919 SESDYIVMP True H1975_Epitope_Rep2 1039.4532127885498 1039.45210993586 58.687 2 -0.02376354238235259 0.012815841923662159 0.11118988521093863 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|4|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1', 'NCOR2-SCARB1|11|fusion', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'SCARB1|p.G379*|1|0.3|ENSG00000073060|chr12:124795254-124795263|GGGGATTCCC/-|frameshift_variant'] 103629 5262 SPTKNNIAV True PC9_epitope_Rep3 942.5134449763399 942.51234993586 25.32 2 -0.023765914108104805 0.012815841923662159 0.11119411641054663 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 18071 13902 EIGPFQLEP True H1975_Epitope_Rep2 1028.5178616504397 1028.51676993586 58.621 2 -0.02376787617691291 0.012815841923662159 0.11119761686117277 ['ENSG00000131381|ENST00000253699|RBSN'] 43242 21082 IFLSQPILL True PC9_epitope_Rep6 1042.64266824074 1042.6415699358602 93.917 2 -0.023796824769520428 0.012836172720454302 0.11124927197615402 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 55608 20685 LAIGASFTV True PC9_epitope_Rep2 877.49091862661 877.49037496793 85.0 1 -0.023797093812432148 0.012836172720454302 0.11124975212888852 ['nc|ENSG00000104635|Q15043-3|SLC39A14', 'nc|ENSG00000104635|Q15043-2|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 118256 17573 TYLEKFQNL True PC9_epitope_Rep2 1154.5971746002997 1154.5960699358602 72.87 2 -0.023855378605496767 0.012836172720454302 0.11135380578043971 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 87939 6314 QRLETQVSA True PC9_epitope_Rep5 1030.5407223533398 1030.5396299358601 29.261 2 -0.023898162177527937 0.012836172720454302 0.11143022945965955 ['ENSG00000196878|ENST00000356082|LAMB3'] 125 19995 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.50506993586 82.888 2 -0.023951894397425667 0.012856224555388901 0.11152626305910915 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 38946 10493 HHIGDRSLSL True PC9_epitope_Rep3 1133.59415490853 1133.5924949037899 45.301 3 -0.02395974137326721 0.012856224555388901 0.11154029256027287 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 111588 19757 TIDDGIFEV True PC9_epitope_Rep6 1007.48114178855 1007.48004993586 88.655 2 -0.02396771090053432 0.012856224555388901 0.11155454244589547 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 25741 4546 FESTDPREA True H1975_Epitope_Rep2 1050.4618033262998 1050.4607099358602 22.595 2 -0.0239739120294891 0.012856224555388901 0.1115656312429072 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 98531 18085 SFNDTFVHV True PC9_epitope_Rep5 1064.49270953176 1064.4916099358602 74.577 2 -0.023980579707279227 0.012856224555388901 0.11157755518682642 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 114768 5926 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.5496749679301 29.415 1 -0.023999056629038028 0.012871308333154863 0.11161060254709324 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 112158 5895 TKASIKDVL True NCI_RA007_Epitope_Rep3 973.5807962601699 973.57968993586 30.164 2 -0.024024784804666105 0.012871308333154863 0.1116566308368575 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 84826 7166 QEAGSPPVV True H1975_Epitope_Rep2 882.4446967101799 882.44414496793 32.497 1 -0.024036999167264046 0.012871308333154863 0.11167848730232298 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 64015 18593 LPAAMPITA True PC9_epitope_Rep1 883.48372507119 883.48317496793 76.305 1 -0.02404129138650722 0.012871308333154863 0.11168616854690604 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2'] 107788 17143 SVTFVAEQV True PC9_epitope_Rep4 978.5022115862997 978.50110993586 73.945 2 -0.02404364351635908 0.012871308333154863 0.1116903780159663 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 107124 7674 SVHTDMASV True PC9_epitope_Rep5 945.42258136661 945.42148993586 34.462 2 -0.024056673665499066 0.012871308333154863 0.1117136993409775 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'ENST00000571745.1_1_17:7130492-7131139:-|nuORF'] 75900 10915 NLQTVNVDEN True PC9_epitope_Rep1 1144.53603089572 1144.5349299358602 46.87 2 -0.024062691570670893 0.012871308333154863 0.11172447133212231 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 134754 13807 VYTSVVEEL True NCI_RA007_Epitope_Rep5 1037.5280919809697 1037.52757496793 59.783 1 -0.024064847368868627 0.012871308333154863 0.11172833036820133 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 103086 21961 SPGTALILLEA True PC9_epitope_Rep2 1083.61757569171 1083.61646993586 89.951 2 -0.024088448364924464 0.012871308333154863 0.11177058403068897 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 78702 6056 PAAAAAAAAAA True PC9_epitope_Rep4 825.4344663796498 825.43336993586 30.288 2 -0.024103802945288747 0.012871308333154863 0.11179807991487158 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 9146 8454 AVLDFVKQK True NCI_RA007_Epitope_Rep1 1046.61243074162 1046.61132993586 36.883 2 -0.02413634163579408 0.012871308333154863 0.11185636366099762 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 24571 14703 FAHPYQYEL True PC9_epitope_Rep4 1166.53965972418 1166.53856993586 64.49 2 -0.024144546549490446 0.012871308333154863 0.11187106380094211 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 37450 11752 GVTLVPIE True NCI_RA007_Epitope_Rep5 826.48001958974 826.4794749679301 51.863 1 -0.024166196609585695 0.012871308333154863 0.1119098591684511 ['ENSG00000130702|ENST00000252999|LAMA5'] 119057 10431 VAGGAVYL True H1975_Epitope_Rep2 748.4119400299201 748.41139496793 45.138 1 -0.024206371756784247 0.012871308333154863 0.11198187533976355 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 29809 19735 FVQDLLSTV True PC9_epitope_Rep6 1020.54916177872 1020.54806993586 88.568 2 -0.024214589616693576 0.012871308333154863 0.1119966103372363 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 110331 5060 TETQEKNPLP True H1975_Epitope_Rep2 1155.5771674317098 1155.57606993586 24.545 2 -0.02422153820696723 0.012871308333154863 0.11200907054423276 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000402089.4_1_4:91760056-91760137:-|nuORF'] 54500 15676 KYIDQKFVL True PC9_epitope_Rep3 1152.6542955536 1152.6531899358602 65.44 2 -0.02422878797351757 0.012871308333154863 0.11202207186334222 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 134564 14213 VYSEVAAYEF True NCI_RA007_Epitope_Rep4 1176.5339056373998 1176.53280993586 61.95 2 -0.024238047961227 0.012871308333154863 0.11203867974793488 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 75861 13532 NLQEAEEWYK True PC9_epitope_Rep6 1308.59863115228 1308.5975299358602 63.781 2 -0.024250853297755247 0.012871308333154863 0.11206164911586296 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 72063 8214 MEVASVAA True H1975_Epitope_Rep3 776.3738402690399 776.37274993586 36.578 2 -0.02425879995664784 0.012871308333154863 0.11207590497949214 ['ENST00000367188.4_1_1:204380617-204380770:-|nuORF'] 86311 9313 QITQINHGL True PC9_epitope_Rep2 1022.5508931142199 1022.5497899358601 41.161 2 -0.024261681175962883 0.012871308333154863 0.11208107404268386 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 55115 15709 LAAATATFAAA True PC9_epitope_Rep1 977.5181960036099 977.51708993586 65.248 2 -0.024267882142850816 0.012871308333154863 0.11209219948319471 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 76367 8083 NPYYGGESA True PC9_epitope_Rep4 956.3875757568799 956.3870249679301 38.543 1 -0.02427740288213503 0.012871308333154863 0.11210928259727725 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 35760 18111 GTIGLIHAI True PC9_epitope_Rep1 893.53345214493 893.53234993586 74.456 2 -0.024295077094528265 0.012890240246670378 0.11214100040343011 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 118139 21604 TYIPGTQITF True PC9_epitope_Rep2 1139.58627556343 1139.5857749679299 88.574 1 -0.024303850715343432 0.012890240246670378 0.11215674772853408 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 138565 11857 YIDEGRLVL True NCI_RA007_Epitope_Rep5 1076.5866099165999 1076.58550993586 52.264 2 -0.024306221490706242 0.012890240246670378 0.11216100318024758 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 7236 21269 ARDEIIWLL True PC9_epitope_Rep4 1127.63389446219 1127.63337496793 89.98 1 -0.024326246357932665 0.012890240246670378 0.11219695160152536 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 3863 20572 AGWTCLLPL True PC9_epitope_Rep5 972.5102741721998 972.50916993586 84.177 2 -0.024336316919928665 0.012890240246670378 0.1122150332354295 ['UGT1A7|p.G8C|1|0.32|ENSG00000244122|chr2:233681959-233681959|G/T|missense_variant'] 39940 14394 HPIEPVLITA True PC9_epitope_Rep6 1088.62299542532 1088.62188993586 67.263 2 -0.024364127162988605 0.012890240246670378 0.11226497703865054 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 91547 17052 RIIDVVYNA True PC9_epitope_Rep1 1061.58694426977 1061.58637496793 70.416 1 -0.02437107374211051 0.012890240246670378 0.1122774546944716 ['ENSG00000142937|ENST00000396651|RPS8'] 5274 4260 ALQASALK True NCI_RA007_Epitope_Rep5 800.47560291564 800.4745099358599 22.956 2 -0.02437760677108506 0.012890240246670378 0.11228919041165078 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 32595 12405 GGHGPSFPL True PC9_epitope_Rep4 867.42390169595 867.42280993586 55.519 2 -0.024378972682373566 0.012890240246670378 0.11229164419888187 ['ENSG00000079246|ENST00000392132|XRCC5'] 137911 10735 YEYGIFNQK True NCI_RA007_Epitope_Rep1 1160.55022440788 1160.54912993586 45.749 2 -0.024426637064633574 0.012910823252328445 0.11237729442583769 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 9483 21544 AVVPGLLEV True PC9_epitope_Rep2 895.5378688190299 895.5373249679301 88.336 1 -0.024441462562817335 0.012910823252328445 0.1124039444082585 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 105624 16042 SSDSTFLVL True NCI_RA007_Epitope_Rep3 967.4862271689899 967.48512993586 70.788 2 -0.024443452173761263 0.012910823252328445 0.11240752122736698 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 85436 12504 QEYFGSLAA True NCI_RA007_Epitope_Rep4 984.4552613938797 984.45471496793 55.112 1 -0.02445992419412834 0.01293168047615989 0.11243713685227319 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 76331 19482 NPTLILAA True PC9_epitope_Rep3 811.4803539429099 811.47924993586 80.167 2 -0.024488542623658804 0.01293168047615989 0.1124886040169366 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 138721 19728 YIPTELDQV True PC9_epitope_Rep2 1076.53899101784 1076.53847496793 81.273 1 -0.02450191306712188 0.012951704058914198 0.1125126550124824 ['ENSG00000149100|ENST00000531120|EIF3M'] 738 19645 AAVLSVPAV True PC9_epitope_Rep2 825.4960040070499 825.49490993586 80.949 2 -0.024549663381982632 0.012951704058914198 0.11259857873677033 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 109633 9167 TEALHFVAA True H1975_Epitope_Rep1 957.4919812557698 957.49088993586 40.166 2 -0.024554450311408887 0.012951704058914198 0.11260719506908848 ['ENSG00000125817|ENST00000379751|CENPB'] 106159 4710 STDPAAPNLK True NCI_RA007_Epitope_Rep5 1012.5189242796 1012.51782993586 24.803 2 -0.024556497808750966 0.012951704058914198 0.11261088064605346 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 119179 10983 VAKGGLGLI True PC9_epitope_Rep4 826.5276384884999 826.52654993586 50.021 2 -0.02456467287164545 0.012951704058914198 0.1126255969331633 ['ENSG00000101843|ENST00000217958|PSMD10'] 114440 12980 TPVETVNIS True PC9_epitope_Rep4 958.49712620586 958.4965749679301 57.822 1 -0.024616147657573206 0.01297227871133469 0.11271829007914777 ['ENSG00000169676|ENST00000304374|DRD5'] 88951 2686 QVHPDTGISSK True PC9_epitope_Rep3 1167.5884008217502 1167.58675490379 14.799 3 -0.024640120792825453 0.01297227871133469 0.11276147801271512 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 125491 17126 VIYPARISL True PC9_epitope_Rep4 1030.61751612206 1030.61640993586 73.877 2 -0.024651751697844605 0.01297227871133469 0.11278243544891109 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 124903 7133 VHPPPTTTY True PC9_epitope_Rep5 1011.5025459394701 1011.50144993586 32.406 2 -0.02470569553810826 0.012992850721349373 0.11287967138713108 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 27993 19639 FQLEHIM[Oxidation]DL True PC9_epitope_Rep3 1160.5535959166 1160.5524899358602 80.778 2 -0.02472363623196194 0.012992850721349373 0.11291202329235288 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 137707 5869 YELGRPAA True NCI_RA007_Epitope_Rep3 875.4501164437899 875.44900993586 30.064 2 -0.024723839326538082 0.012992850721349373 0.11291238956398629 ['ENSG00000142937|ENST00000396651|RPS8', 'ENST00000470475.1_1_1:45241268-45242451:+|nuORF'] 114883 4218 TQRPEGTSL True NCI_RA007_Epitope_Rep4 987.49852318819 987.4974299358599 22.536 2 -0.02475881221923276 0.013012584538994948 0.11297547403397687 ['ENST00000569758.1_1_15:75646945-75647372:+|nuORF', 'ENST00000567393.5_1_15:75645991-75647372:+|nuORF', 'ENSG00000140398|ENST00000355059|NEIL1', 'ENST00000561643.5_1_15:75646668-75647372:+|nuORF'] 71676 5712 M[Oxidation]EDAKVYVA True H1975_Epitope_Rep2 1040.4848476504399 1040.48374993586 26.97 2 -0.024769588441444952 0.013012584538994948 0.11299491729907664 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 17571 8082 EHGPNPIL True PC9_epitope_Rep6 875.45011644379 875.44900993586 40.59 2 -0.02477345612890156 0.013012584538994948 0.1130018962444576 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 73291 13098 MTDGGLGLY True H1975_Epitope_Rep2 925.42151873745 925.4209649679301 55.507 1 -0.024781815167539023 0.013012584538994948 0.11301698052575194 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 7093 8645 AQSKRGILTL True PC9_epitope_Rep2 1085.65569253593 1085.65458993586 38.619 2 -0.024805005812171585 0.013012584538994948 0.11305883656805289 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000411655.1_1_10:70782635-70782722:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 103019 20101 SPFPLEAV True PC9_epitope_Rep4 858.44871946146 858.4481749679301 85.452 1 -0.024805570475553592 0.013012584538994948 0.1130598558468102 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 64674 21329 LPVLIPVAS True PC9_epitope_Rep2 907.5742543277499 907.57314993586 87.506 2 -0.024828846327849048 0.013031476686709606 0.11310187692118656 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 126298 22252 VLIDDLTTL True PC9_epitope_Rep3 1001.56447748969 1001.56338993586 90.878 2 -0.024841422013368687 0.013031476686709606 0.11312458501894147 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 100431 10473 SLAELEKR True PC9_epitope_Rep6 944.5290950404799 944.52798993586 51.043 2 -0.02489765203444726 0.013031476686709606 0.11322615965646643 ['nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN', 'ENST00000562715.1_1_16:14670117-14678644:-|nuORF'] 81790 18615 PLPPLPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 76.629 2 -0.024903886000986964 0.013031476686709606 0.11323742472729223 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 81788 17677 PLPPLPPPP True PC9_epitope_Rep4 923.5480395799099 923.54694993586 76.019 2 -0.024919189762861702 0.013031476686709606 0.11326508269132819 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 103993 22362 SQDAGIWYL True PC9_epitope_Rep1 1051.49746055903 1051.49687496793 90.832 1 -0.024968995004561994 0.013031476686709606 0.11335512692133576 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 40620 17385 HRLDEDWDSAL True PC9_epitope_Rep5 1355.6105928183101 1355.6094899358602 71.872 2 -0.02500317485756106 0.013031476686709606 0.11341695074172395 ['ENSG00000118217|ENST00000367942|ATF6', 'ATF6|p.N437Tfs*15|1|0.29|ENSG00000118217|chr1:161846567-161846567|A/-|frameshift_variant'] 26537 14904 FIHQHFVEV True PC9_epitope_Rep1 1154.5872786229402 1154.5856249037902 62.149 3 -0.0250198933076737 0.013031476686709606 0.11344719937467553 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 96447 7666 SAAHAIVSV True PC9_epitope_Rep4 853.46576650793 853.46466993586 36.869 2 -0.02502663113578952 0.013031476686709606 0.11345939170847975 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 64023 11214 LPAEAVEAA True PC9_epitope_Rep2 869.4494477374499 869.44834993586 48.462 2 -0.0250969682294568 0.013071475942921934 0.11358672418422157 ['ENSG00000130706|ENST00000253003|ADRM1'] 93919 15941 RRGEYVLTF True PC9_epitope_Rep5 1139.60874234351 1139.60710490379 66.307 3 -0.02511796099380127 0.013071475942921934 0.11362474722998875 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1', 'ENSG00000111252|ENST00000341259|SH2B3'] 72969 19867 MQGPPLLTAA True PC9_epitope_Rep5 997.52665251233 997.52554993586 81.47 2 -0.0251200804396779 0.013071475942921934 0.11362858656401971 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 57351 12634 LEAFSQAISA True H1975_Epitope_Rep3 1035.5236753068698 1035.52256993586 53.802 2 -0.025140242613739396 0.013071475942921934 0.11366511450529647 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'nc|ENSG00000160563|Q6P2C8-4|MED27'] 104377 20869 SQIYPVVCV True PC9_epitope_Rep5 1006.5157534754599 1006.5151749679301 85.324 1 -0.025172706970903982 0.013071475942921934 0.11372394774993573 ['ENSG00000144224|ENST00000272638|UBXN4'] 101493 21167 SLLDKIIGA True PC9_epitope_Rep3 928.5593325396 928.55822993586 86.707 2 -0.0251950125407254 0.013071475942921934 0.1137643832353717 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 127532 12490 VNQIGSVTESL True NCI_RA007_Epitope_Rep1 1145.59281749585 1145.59227496793 52.562 1 -0.02519563834399988 0.013071475942921934 0.11376551783592642 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 103130 5082 SPHPPSEVTA True PC9_epitope_Rep4 1020.48762415132 1020.48652993586 26.198 2 -0.025237035094955413 0.013071475942921934 0.11384058909502948 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 46465 15332 ISVASFQEL True NCI_RA007_Epitope_Rep5 992.5178616504401 992.51676993586 65.676 2 -0.025246353163335088 0.013071475942921934 0.11385749182101608 ['nc|ENSG00000108788|Q9UH92|MLX', 'nc|ENSG00000108788|Q9UH92-2|MLX', 'ENSG00000108788|ENST00000435881|MLX', 'ENST00000585403.5_1_17:40721871-40723618:+|nuORF'] 108629 8572 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59143490379 38.333 3 -0.02526616189377745 0.013071475942921934 0.11389343019052438 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 33351 6272 GKSTISTEL True NCI_RA007_Epitope_Rep4 934.49712620586 934.49602993586 30.73 2 -0.025306117554740198 0.01308698999230177 0.11396594478731079 ['ENSG00000095906|ENST00000262302|NUBP2', 'ENST00000566447.5_1_16:1832991-1836957:+|nuORF', 'ENST00000566090.5_1_16:1832991-1836988:+|nuORF', 'ENST00000568706.1_1_16:1834024-1837680:+|nuORF'] 116093 6025 TSRENVSI True PC9_epitope_Rep6 904.4614094034799 904.46030993586 31.519 2 -0.02535553407585577 0.01308698999230177 0.11405567457422651 ['ENSG00000069248|ENST00000261396|NUP133'] 18842 12129 ELDPNNAVYY True H1975_Epitope_Rep2 1196.53496826656 1196.53437496793 51.738 1 -0.02539506310286756 0.01308698999230177 0.11412748654209402 ['ENSG00000197860|ENST00000381007|SGTB'] 58413 4878 LENSTRENLEK True H1975_Epitope_Rep3 1331.6681076944299 1331.66647490379 23.889 3 -0.02541845839429639 0.01308698999230177 0.11417000349097449 ['ENSG00000165959|ENST00000298912|CLMN', 'ENST00000556454.1_1_14:95660863-95677170:-|nuORF', 'CLMN|p.P528Qfs*6|1|0.25|ENSG00000165959|chr14:95203766-95203766|G/-|frameshift_variant'] 10292 9773 C[Carbamidomethyl]C[Carbamidomethyl]SGAIIVLTK True NCI_RA007_Epitope_Rep1 1220.62571548946 1220.62460993586 42.018 2 -0.025442743501558743 0.01308698999230177 0.11421414930326743 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF'] 97087 16655 SDGSFFLY True NCI_RA007_Epitope_Rep4 934.4072485723 934.4067049679301 72.213 1 -0.025445672059032035 0.01308698999230177 0.11421947368704907 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 134166 12553 VYLPNINKI True NCI_RA007_Epitope_Rep2 1072.62808080576 1072.6269899358601 53.442 2 -0.025452087589784834 0.01308698999230177 0.1142311383149877 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 7107 15945 AQVALVNEV True PC9_epitope_Rep4 941.51819600361 941.5176449679301 69.26 1 -0.025473407599852813 0.01308698999230177 0.1142699080718798 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 131653 5459 VTLTSEEEAR True PC9_epitope_Rep6 1133.5564319871298 1133.55532993586 28.932 2 -0.025473683808588773 0.01308698999230177 0.11427041040930644 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 23349 7387 EVRKEGVAV True PC9_epitope_Rep2 985.5556441414898 985.55454993586 33.794 2 -0.025476389777743684 0.01308698999230177 0.11427533180416087 ['ENST00000441302.6_1_3:39139332-39139530:-|nuORF'] 133740 13996 VYDTVFKHF True PC9_epitope_Rep4 1154.5760452328998 1154.5744049037899 61.743 3 -0.025489297170573248 0.01308698999230177 0.11429880876179356 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 24588 17087 FAIDPHLLL True NCI_RA007_Epitope_Rep5 1037.59096702105 1037.5898699358602 72.493 2 -0.025501483321916898 0.01308698999230177 0.1143209769803348 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 6779 16618 AQDPTAFSV True PC9_epitope_Rep1 934.4396113297399 934.43850993586 68.747 2 -0.025502190757781634 0.01308698999230177 0.11432226399237266 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 84999 13187 QEFRFLPPP True NCI_RA007_Epitope_Rep4 1129.5920296502097 1129.59092993586 57.837 2 -0.025516738334264384 0.01308698999230177 0.11434873212035669 ['ENSG00000113369|ENST00000265138|ARRDC3'] 21819 7339 ERYSGNQVL True PC9_epitope_Rep2 1064.5250722892 1064.5239699358601 33.611 2 -0.025534167147213682 0.01308698999230177 0.11438044809201502 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 76266 6753 NPKEFYHEV True PC9_epitope_Rep4 1161.54547338061 1161.54382490379 33.171 3 -0.02555054930352904 0.01308698999230177 0.11441026505157018 ['ENSG00000174231|ENST00000304992|PRPF8'] 112211 19516 TKKLFHEIYLF True PC9_epitope_Rep5 1437.80202241645 1437.80038490379 80.121 3 -0.025569947118230327 0.01308698999230177 0.11444557783438819 ['ENSG00000066248|ENST00000264051|NGEF', 'nc|ENSG00000066248|Q8N5V2-3|NGEF'] 36119 21266 GVAIPLPGV True PC9_epitope_Rep5 821.50108938749 821.5005449679301 86.85 1 -0.02558764049889322 0.01308698999230177 0.11447779445434271 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 4901 23808 ALFGALFLA True PC9_epitope_Rep2 921.5323895157699 921.53184496793 97.047 1 -0.02560555277658517 0.01308698999230177 0.11451041613741225 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 8676 11879 AVAISLPK True PC9_epitope_Rep2 797.50108938749 797.49998993586 51.017 2 -0.02560603086539068 0.01308698999230177 0.1145112869180124 ['ENSG00000149257|ENST00000358171|SERPINH1'] 108890 7236 TAAPPAQPL True NCI_RA007_Epitope_Rep5 864.4705175352 864.46942993586 34.511 2 -0.025663700344945552 0.01308698999230177 0.11461635898207306 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 103037 9988 SPFSGLQKA True PC9_epitope_Rep2 933.49198125577 933.49088993586 43.749 2 -0.025667120477456007 0.013106412092963588 0.11462259248723097 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'nc|ENSG00000137802|O60336-3|MAPKBP1', 'ENST00000505061.5_1_15:42111671-42117631:+|nuORF', 'nc|ENSG00000137802|O60336-4|MAPKBP1'] 141452 17882 YTGEGQWEV True PC9_epitope_Rep3 1067.45598966987 1067.4548899358601 73.983 2 -0.025671675058832836 0.013106412092963588 0.11463089399913154 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 37352 17827 GVSGRIFTI True PC9_epitope_Rep5 948.53926580136 948.53816993586 73.591 2 -0.025674067976731295 0.013106412092963588 0.1146352556748531 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 87195 21913 QPILLELEA True PC9_epitope_Rep5 1024.580461907 1024.57936993586 89.328 2 -0.025677705863716118 0.013106412092963588 0.11464188683325849 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 86020 10347 QHQEHFIQM True PC9_epitope_Rep1 1196.5396768075198 1196.53804490379 44.681 3 -0.025691927120274995 0.013106412092963588 0.11466781199498115 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 8769 12990 AVDGNTVEL True PC9_epitope_Rep4 916.45017601344 916.44906993586 57.859 2 -0.025692204381383067 0.013106412092963588 0.11466831747920951 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 4216 9833 AIATFNVDHK True PC9_epitope_Rep1 1114.5771078620598 1114.5760099358602 42.684 2 -0.02571844572300243 0.013106412092963588 0.11471616605121443 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 71023 14412 LYITEPKTI True PC9_epitope_Rep4 1076.61176203528 1076.6106699358602 63.345 2 -0.0257894106199778 0.013124706083536403 0.11484563395882709 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 70096 19727 LVPDVVNEV True PC9_epitope_Rep1 982.53351171458 982.53240993586 80.707 2 -0.02580865955100767 0.013124706083536403 0.11488076926476902 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 119125 21707 VAIAGLMEV True PC9_epitope_Rep1 901.49428975489 901.49318993586 88.328 2 -0.025819775036749235 0.013124706083536403 0.11490106193131779 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 73669 14324 MYKLSSEQF True PC9_epitope_Rep2 1131.52704643515 1131.5259499358601 60.361 2 -0.025820235106537578 0.013124706083536403 0.11490190189870578 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 8424 18365 ATMPVVPSV True PC9_epitope_Rep4 899.4786396907499 899.47754993586 78.707 2 -0.025828913971489145 0.013124706083536403 0.11491774804912458 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2', 'ENST00000479237.5_1_9:131770965-131773053:-|nuORF', 'ENST00000461811.5_1_9:131770965-131772716:-|nuORF'] 99836 19830 SILETVTAV True PC9_epitope_Rep4 931.52261267771 931.52150993586 84.404 2 -0.025856240458254114 0.013124706083536403 0.11496765164484658 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 77865 24299 NVFFGSIWL True PC9_epitope_Rep5 1081.5596668927699 1081.55907496793 98.488 1 -0.025863099950271574 0.013124706083536403 0.11498018082837502 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 126297 22126 VLIDDLTTL True PC9_epitope_Rep2 1001.56447748969 1001.56338993586 90.585 2 -0.025865795713523657 0.013124706083536403 0.11498510502855298 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 70870 19668 LYEAPVSYTF True NCI_RA007_Epitope_Rep4 1188.5702911461196 1188.56918993586 84.999 2 -0.0259171991260909 0.013124706083536403 0.11507902909141163 ['ENSG00000128849|ENST00000281282|CGNL1', 'nc|ENSG00000128849|Q0VF96-2|CGNL1'] 90293 4518 REERPPTLSA True H1975_Epitope_Rep2 1154.6043852390599 1154.6027249037902 22.491 3 -0.02592381994187217 0.013124706083536403 0.11509113052600314 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 35720 7435 GTFPGNYVK True NCI_RA007_Epitope_Rep3 981.4919812557698 981.49088993586 36.37 2 -0.025928440864137543 0.013124706083536403 0.1150995771122517 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'PDLIM1-SORBS1|11|fusion', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'PDLIM1-SORBS1|9|fusion', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'PDLIM1-SORBS1|7|fusion', 'PDLIM1-SORBS1|10|fusion', 'PDLIM1-SORBS1|8|fusion', 'nc|ENSG00000095637|Q9BX66-4|SORBS1', 'PDLIM1-SORBS1|6|fusion', 'nc|ENSG00000154556|O94875-8|SORBS2', 'nc|ENSG00000154556|O94875-12|SORBS2', 'nc|ENSG00000154556|O94875-10|SORBS2', 'nc|ENSG00000154556|O94875-4|SORBS2', 'ENST00000478461.1_1_4:186508783-186510953:-|nuORF', 'nc|ENSG00000154556|O94875-2|SORBS2', 'nc|ENSG00000154556|O94875-3|SORBS2', 'nc|ENSG00000154556|O94875-9|SORBS2', 'nc|ENSG00000154556|O94875-7|SORBS2', 'nc|ENSG00000154556|O94875|SORBS2', 'nc|ENSG00000154556|O94875-11|SORBS2', 'ENSG00000154556|ENST00000695409|SORBS2'] 13493 12825 DNKTSQPITL True PC9_epitope_Rep1 1115.58225281215 1115.5811499358601 54.206 2 -0.02600950312881989 0.013166894664842681 0.11524782161762973 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'SDK2|p.P1051Lfs*33|1|0.18|ENSG00000069188|chr17:73398361-73398371|GCGGGCATCGG/-|frameshift_variant', 'SDK2|p.S1083Vfs*66|1|0.28|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 30054 17451 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6171499358602 72.378 2 -0.026018569057419436 0.013166894664842681 0.11526440946958746 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 134207 18517 VYLTDPQGL True PC9_epitope_Rep4 1004.5178616504397 1004.51676993586 79.299 2 -0.026056019094070886 0.013186860159439184 0.1153329492294761 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK', 'ENST00000464499.5_1_16:70501260-70504246:+|nuORF'] 126474 17535 VLLGKVYVV True PC9_epitope_Rep4 988.63210355704 988.63100993586 75.461 2 -0.026061697695073462 0.013186860159439184 0.11534334450370526 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 28029 19835 FQPPPGVNI True PC9_epitope_Rep1 967.5127167003499 967.51160993586 81.111 2 -0.026072243213899376 0.013186860159439184 0.11536265092437678 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 49268 8098 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 36.098 2 -0.026084958401038326 0.013186860159439184 0.11538593252271544 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 40397 10468 HQVKIGDFGL True NCI_RA007_Epitope_Rep3 1112.5978433066398 1112.59674993586 48.24 2 -0.02608684036899443 0.013186860159439184 0.11538937869939979 ['ENSG00000162434|ENST00000342505|JAK1'] 128053 7788 VPKNSDPWAA True PC9_epitope_Rep6 1083.53490869691 1083.53380993586 39.343 2 -0.026112423904125676 0.013207668141309225 0.1154362333005918 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 110302 5037 TESSHFYSA True H1975_Epitope_Rep1 1027.4246895415897 1027.42358993586 24.444 2 -0.026117830740875366 0.013207668141309225 0.11544613728234866 ['ENSG00000111266|ENST00000298573|DUSP16'] 104762 12310 SQVVQVVL True NCI_RA007_Epitope_Rep3 870.5174677276198 870.51636993586 55.597 2 -0.026191350580296317 0.01322847434445323 0.11558086650445747 ['ENSG00000102753|ENST00000261667|KPNA3'] 45570 12080 IQSGGNYNL True PC9_epitope_Rep5 964.4614094034799 964.46030993586 51.46 2 -0.026246229839851625 0.01322847434445323 0.11568150764649122 ['ENSG00000092201|ENST00000216297|SUPT16H', 'ENST00000537175.1_1_12:16554488-16554707:-|nuORF'] 74185 9156 NEEMSGLPA True H1975_Epitope_Rep2 946.4065969492998 946.40604496793 40.17 1 -0.026294729163264464 0.01326923076923077 0.11577049996422925 ['ENSG00000197601|ENST00000354817|FAR1'] 123600 5663 VGQDPVLR True PC9_epitope_Rep2 882.49231560894 882.49120993586 27.17 2 -0.026301239928613097 0.01326923076923077 0.11578245034147462 ['ENSG00000106028|ENST00000265304|SSBP1', 'ENST00000489378.5_1_7:141438966-141445458:+|nuORF'] 1228 8728 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.40686993586 38.533 2 -0.02630146889904737 0.01326923076923077 0.11578287062778073 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 112975 21267 TLLRLLYEA True PC9_epitope_Rep1 1090.6386454894598 1090.63754993586 86.628 2 -0.026305790831370437 0.01326923076923077 0.11579080394414801 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 38181 5760 HDPSAVAV True PC9_epitope_Rep1 794.3922672145001 794.39116993586 26.972 2 -0.026324130995030514 0.01326923076923077 0.11582447329083324 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 30753 7424 GALPYAVGK True NCI_RA007_Epitope_Rep4 874.4912529797799 874.49014993586 35.201 2 -0.02634681151223357 0.01326923076923077 0.11586612025831883 ['ENSG00000165934|ENST00000298875|CPSF2'] 97488 4703 SEEKPVPAAP True H1975_Epitope_Rep3 1023.5236753068698 1023.5225699358599 23.215 2 -0.02638193518888417 0.01326923076923077 0.1159306366105028 ['nc|ENSG00000189159|Q9UK76-3|JPT1', 'ENSG00000189159|ENST00000409753|JPT1'] 134178 17422 VYLPNINKI True PC9_epitope_Rep4 1072.62808080576 1072.6269899358601 75.007 2 -0.026407352736979355 0.01328492097394276 0.11597734011352802 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 131565 14736 VTLGEVPAA True PC9_epitope_Rep4 855.4701831820299 855.46908993586 64.615 2 -0.02643121683070837 0.01328492097394276 0.11602120121596812 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3', 'chrX:152751822-152752394|112|20.12|0.06|8.5|-|ENST00000623806|MAGEA2,MAGEA2', 'ENSG00000183305|ENST00000682532|MAGEA2B', 'chrX:152752513-152753313|115|31.17|0.07|8.89|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751428-152751509|133|65.11|0.18|8.5|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152751725|116|29.16|0.07|8.73|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152752394|126|53.4|0.12|8.82|-|ENST00000623438|MAGEA2,MAGEA2', 'ENSG00000268606|ENST00000684311|MAGEA2', 'chrX:152752513-152753788|112|27.71|0.06|8.91|-|ENST00000620710|MAGEA2,MAGEA2', 'chrX:152716745-152716896|116|29.12|0.07|8.72|+|ENST00000447530|MAGEA2B,MAGEA2B', 'chrX:152714682-152715079|111|18.5|0.03|9.17|+|ENST00000447530|MAGEA2B,MAGEA2B'] 6401 7716 APRQPGLMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 34.499 2 -0.02643627060501561 0.01328492097394276 0.11603049131057222 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 142659 15087 YYPEYKLLF True NCI_RA007_Epitope_Rep3 1234.62741209942 1234.62630993586 66.829 2 -0.026438111077652104 0.01328492097394276 0.11603387468664188 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 107359 18861 SVLGTSVVQV True PC9_epitope_Rep2 987.56006081559 987.55896993586 77.916 2 -0.026444192793477945 0.01328492097394276 0.11604505531272656 ['CDH10|p.V175L|1|0.18|ENSG00000040731|chr5:24537383-24537383|C/A|missense_variant'] 38825 5947 HHAQDYGGL True PC9_epitope_Rep1 996.44134266524 996.44024993586 27.689 2 -0.02646987886944789 0.01328492097394276 0.11609228491783022 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 41599 13701 IADGLPVAV True NCI_RA007_Epitope_Rep4 853.49091862661 853.49037496793 59.925 1 -0.026478422699147103 0.01328492097394276 0.1161079976463741 ['ENSG00000198355|ENST00000360612|PIM3'] 71980 5190 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep1 849.3902189896098 849.38966496793 25.026 1 -0.026527660687594816 0.01328492097394276 0.11619857894045747 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 76487 14144 NQIECHPYL True PC9_epitope_Rep1 1115.50697969691 1115.50588993586 59.228 2 -0.026568307411510363 0.01328492097394276 0.11627339248443677 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2'] 49443 6317 KEYDVAVEA True NCI_RA007_Epitope_Rep5 1022.4920408254197 1022.4909499358599 30.976 2 -0.02658108476449359 0.01328492097394276 0.11629691718974587 ['STAG1|p.L780Rfs*13|1|0.05|ENSG00000118007|chr3:136377670-136377691|ACTGGAGTATTAACATTAGACA/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 8884 14426 AVFPSIVG True H1975_Epitope_Rep3 788.4432401582 788.44269496793 60.844 1 -0.026584523704898125 0.01328492097394276 0.11630324927836568 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 6457 13252 APSGNFVAC True PC9_epitope_Rep1 864.37998827864 864.37888993586 55.84 2 -0.026624733725484826 0.01328492097394276 0.1163773055236558 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 119626 9796 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 42.635 2 -0.026657569928755863 0.01328492097394276 0.11643780562490441 ['CON__P00761'] 74746 7192 NHAPSVQI True PC9_epitope_Rep2 864.44536541652 864.44426993586 33.056 2 -0.02667064547041438 0.01328492097394276 0.11646190319797325 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 89062 8300 QVMQGM[Oxidation]GVSA True PC9_epitope_Rep1 1022.4525019763398 1022.4514099358599 36.759 2 -0.026734898432347397 0.01328492097394276 0.11658036893419355 ['ENSG00000169813|ENST00000682386|HNRNPF'] 134328 23884 VYPALTFIL True PC9_epitope_Rep1 1035.60046907559 1035.59936993586 96.671 2 -0.026735572540991123 0.01328492097394276 0.11658161226190149 ['nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 105039 9909 SRDPHTEFTL True PC9_epitope_Rep4 1201.57275075761 1201.57111490379 45.765 3 -0.026739657177535747 0.01328492097394276 0.11658914617446096 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 61910 19205 LLDELPMIY True H1975_Epitope_Rep1 1105.57293399841 1105.57237496793 80.027 1 -0.026746508080920644 0.01328492097394276 0.11660178309600025 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 6419 7737 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49547496793 34.702 1 -0.026750339854235746 0.01328492097394276 0.11660885146046822 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 108381 16703 SYLERHGLINF True PC9_epitope_Rep4 1347.6935345966297 1347.6924299358602 72.221 2 -0.026772994553620696 0.01328492097394276 0.1166506480741436 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 133859 20294 VYGPLPQSF True PC9_epitope_Rep2 1006.5123823471798 1006.51187496793 83.483 1 -0.02684033929476546 0.013305995173106084 0.11677495712996737 ['ENSG00000131143|ENST00000253452|COX4I1', 'COX4I1|p.K135E|1|0.23|ENSG00000131143|chr16:85806767-85806767|A/G|missense_variant', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 76338 17434 NPTLILAA True PC9_epitope_Rep6 811.4803539429099 811.47924993586 79.674 2 -0.02689429684409674 0.013325645460952015 0.11687462213216758 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 45368 10424 IQDNKFIEA True PC9_epitope_Rep2 1076.55022440788 1076.54912993586 45.417 2 -0.02690941808216134 0.013325645460952015 0.1169025632441821 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 5564 14083 [Acetylation]-AM[Oxidation]VSEFLK True H1975_Epitope_Rep3 981.4841196907499 981.48357496793 59.496 1 -0.02692279041827799 0.013325645460952015 0.11692727661724948 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 42959 10790 IESPPAFTA True H1975_Epitope_Rep1 931.46509780159 931.46454496793 46.467 1 -0.026953608102385278 0.013325645460952015 0.11698424459637961 ['ENSG00000152382|ENST00000367874|TADA1'] 109678 4434 TEAVPRAPA True H1975_Epitope_Rep3 910.4872302284998 910.48612993586 22.177 2 -0.026961400594494547 0.013325645460952015 0.11699865246861872 ['ENSG00000168476|ENST00000306306|REEP4'] 72778 18486 MPAGSFITA True PC9_epitope_Rep1 893.43168949833 893.4311449679301 75.897 1 -0.026987865576378636 0.013325645460952015 0.11704759396954023 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 88733 14364 QTISALIKA True PC9_epitope_Rep1 943.57023157647 943.56912993586 60.075 2 -0.02700296429838099 0.013345575674752306 0.11707552233980147 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 111987 17196 TIREGETLEL True PC9_epitope_Rep3 1159.6084675599898 1159.60736993586 71.3 2 -0.027025762882729443 0.013345575674752306 0.11711770210871757 ['MDGA2|p.G334Dfs*22|2|0.16|ENSG00000139915|chr14:47061568-47061568|T/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2', 'nc|ENSG00000139915|Q7Z553|MDGA2'] 38184 5800 HDPSAVAV True PC9_epitope_Rep3 794.3922672145001 794.39116993586 27.38 2 -0.027048958703664472 0.013345575674752306 0.11716062770911628 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 125001 7112 VIADNVKDWSK True NCI_RA007_Epitope_Rep5 1273.6666511424498 1273.66501490379 34.036 3 -0.027061304661672808 0.013345575674752306 0.11718347931142942 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 90300 4476 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 22.335 3 -0.027073929710841813 0.013345575674752306 0.11720685071607291 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 87260 15212 QPMAVVQSV True PC9_epitope_Rep3 957.4953523840499 957.49424993586 63.658 2 -0.02711624702478434 0.01338513758725957 0.11728521200091617 ['nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'ENSG00000140464|ENST00000268058|PML'] 70101 19639 LVPDVVNEV True PC9_epitope_Rep5 982.53351171458 982.53240993586 80.596 2 -0.027144842858597265 0.01338513758725957 0.11733818519749933 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 48069 22312 IYMDTLNIF True PC9_epitope_Rep4 1128.5525329069999 1128.55197496793 94.063 1 -0.027156050151159662 0.01338513758725957 0.11735895103742451 ['ENSG00000165678|ENST00000372134|GHITM'] 44955 18023 IPAALPVAA True PC9_epitope_Rep1 821.50108938749 821.49998993586 74.118 2 -0.027163104488089333 0.01338513758725957 0.11737202323926726 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 75333 21767 NIPPYFVAL True PC9_epitope_Rep4 1032.56441792004 1032.56332993586 91.921 2 -0.027185957352770254 0.01338513758725957 0.1174143782546141 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 127858 12007 VPFQNAATA True PC9_epitope_Rep1 917.4606811274898 917.45958993586 51.047 2 -0.027232901997764524 0.01338513758725957 0.11750141796466339 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 47949 19896 IYIPSYFDF True NCI_RA007_Epitope_Rep3 1163.55391280599 1163.55280993586 86.717 2 -0.02727482655998788 0.01338513758725957 0.11757918807313493 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 86688 18804 QLIKELPEL True PC9_epitope_Rep4 1081.63831113629 1081.63720993586 80.415 2 -0.027292615975050765 0.01338513758725957 0.11761219832014 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 77260 17082 NRYYPQIL True PC9_epitope_Rep5 1065.56072952193 1065.5596299358601 70.726 2 -0.027321427261309088 0.01338513758725957 0.11766567461118917 ['ENST00000495641.5_1_9:95858537-95872895:+|nuORF', 'ENST00000466929.5_1_9:95858543-95872895:+|nuORF', 'ENST00000468781.5_1_9:95858594-95875386:+|nuORF', 'ENSG00000165233|ENST00000375464|CARD19', 'nc|ENSG00000165233|Q96LW7|CARD19'] 111272 17719 THLLGVAL True PC9_epitope_Rep2 822.49633836022 822.49524993586 73.437 2 -0.02732408806705206 0.01338513758725957 0.11767061415801251 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 1006 8109 AEAAVVAVA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 36.141 1 -0.02733076693663411 0.01338513758725957 0.11768301351736611 ['ENSG00000211450|ENST00000534355|SELENOH'] 45334 9748 IQDDAVHTL True PC9_epitope_Rep1 1010.50327421546 1010.50216993586 42.355 2 -0.027343839772576206 0.013401621852326078 0.11770728595256083 ['ENSG00000115816|ENST00000234170|CEBPZ'] 40441 8092 HRAPVVAIA True PC9_epitope_Rep5 932.5555845718399 932.55448993586 36.064 2 -0.027377565113914887 0.013401621852326078 0.11776992019687879 ['ENSG00000131899|ENST00000316843|LLGL1'] 75487 5540 NKLDHYAIIK True NCI_RA007_Epitope_Rep5 1213.68190728377 1213.68025490379 27.995 3 -0.02737817952269388 0.013401621852326078 0.1177710614843042 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000498163.1_1_8:23064590-23064794:+|nuORF', 'ENST00000438548.2_1_6:133318790-133319099:-|nuORF', 'ENST00000395315.2_1_2:54756482-54756872:+|nuORF'] 63674 22297 LMSLIINTF True PC9_epitope_Rep4 1050.57835373202 1050.5772499358602 94.004 2 -0.027387585060404344 0.013401621852326078 0.11778853358853925 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 47462 2828 IVNTNVPR True NCI_RA007_Epitope_Rep1 911.51886470995 911.51776993586 14.826 2 -0.02740047867791164 0.013401621852326078 0.1178124882309046 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 5238 15677 ALPGLLHA True PC9_epitope_Rep5 790.47012361238 790.46902993586 65.313 2 -0.027402474526922564 0.013401621852326078 0.11781619655937584 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 1677 6718 AEGAYQVAA True H1975_Epitope_Rep2 878.4133965818999 878.41228993586 30.754 2 -0.027429728038460582 0.013401621852326078 0.11786684229871304 ['ENSG00000166188|ENST00000299237|ZNF319'] 26642 18849 FIPPDGNFRL True PC9_epitope_Rep4 1174.61349337078 1174.6123899358602 80.59 2 -0.027438733538077895 0.013401621852326078 0.11788358073727294 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 35811 13664 GTITQVIKV True PC9_epitope_Rep4 957.58588164061 957.58478993586 60.45 2 -0.027464383267151105 0.013401621852326078 0.11793126474503979 ['ENSG00000166747|ENST00000299980|AP1G1', 'nc|ENSG00000166747|O43747-2|AP1G1'] 88815 6565 QTVHEVTTV True PC9_epitope_Rep5 1012.5189242796 1012.51782993586 30.222 2 -0.02746508261395234 0.013401621852326078 0.11793256505094583 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112', 'ENST00000498289.5_1_1:169773308-169819597:+|nuORF'] 139839 6686 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.39156993586 31.125 2 -0.027469305151598615 0.013401621852326078 0.1179404162906204 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 137222 23454 YAYPYIIDF True PC9_epitope_Rep2 1163.5539128059897 1163.55280993586 95.686 2 -0.027474057893784175 0.013401621852326078 0.1179492538106402 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 76658 11046 NQSDTSVSL True PC9_epitope_Rep1 949.43525422529 949.43414993586 47.377 2 -0.027494026237833594 0.013401621852326078 0.11798638913996358 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 129332 13203 VQYNEPLKV True PC9_epitope_Rep3 1088.5866099165999 1088.58550993586 55.821 2 -0.027501527271428114 0.013401621852326078 0.11800034099560584 ['ENSG00000148843|ENST00000369797|PDCD11'] 26142 18859 FGYPFRLNEA True PC9_epitope_Rep4 1212.5927579262 1212.5916699358602 80.627 2 -0.027524102534993232 0.013401621852326078 0.11804233773260304 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 96444 9067 SAAHAIVSV True PC9_epitope_Rep1 853.46576650793 853.46466993586 39.728 2 -0.027549753592031337 0.013401621852326078 0.11809006902402293 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 35866 5324 GTMKAQGVLLK True NCI_RA007_Epitope_Rep5 1144.6638146914797 1144.66216490379 27.171 3 -0.027552184430253746 0.013401621852326078 0.11809459300785308 ['nc|ENSG00000166482|P55083-2|MFAP4'] 128732 8291 VPYEIQKGQA True PC9_epitope_Rep5 1131.59242357303 1131.5913299358601 36.83 2 -0.027590915996605087 0.013414374066965239 0.11816669185912061 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 80988 20061 PIIGSLFL True H1975_Epitope_Rep1 858.5214904789 858.5209449679301 83.479 1 -0.027595774266961446 0.013414374066965239 0.11817573770195217 ['ENSG00000108784|ENST00000225927|NAGLU'] 24371 18618 FAADIISVL True H1975_Epitope_Rep3 947.53278343859 947.53168993586 78.074 2 -0.0276003531476057 0.013414374066965239 0.11818426377818622 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF'] 71766 4255 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 21.476 2 -0.0276265706015113 0.013414374066965239 0.11823309008964392 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 134083 17460 VYKPVSIYL True PC9_epitope_Rep4 1080.6219327961599 1080.62082993586 75.158 2 -0.027630389721125127 0.013414374066965239 0.11824020383568412 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 109852 11970 TEENTIFAP True H1975_Epitope_Rep2 1020.4763907612798 1020.47528993586 51.122 2 -0.027649952640614997 0.013414374066965239 0.11827664771227739 ['ENSG00000102390|ENST00000373358|PBDC1'] 58635 7068 LERDPIPAA True H1975_Epitope_Rep3 980.5290950404798 980.52798993586 32.154 2 -0.027655268095023038 0.013414374066965239 0.11828655125696323 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000493232.5_1_7:2583168-2583660:-|nuORF', 'nc|ENSG00000106009|Q6PJG6-2|BRAT1', 'ENST00000469750.5_1_7:2583168-2595320:-|nuORF'] 27550 18026 FNDSTRLIL True PC9_epitope_Rep1 1077.58185888933 1077.5807699358602 74.129 2 -0.027683780619808904 0.013414374066965239 0.11833968454107581 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 19700 9055 ELRNIELQ True PC9_epitope_Rep6 1013.5505587610498 1013.54946993586 44.887 2 -0.027691661571224463 0.013414374066965239 0.11835437368407316 ['PDZRN4|p.E679Q|1|0.17|ENSG00000165966|chr12:41572814-41572814|G/C|missense_variant'] 134384 23376 VYPFPTFQPAF True PC9_epitope_Rep1 1312.6492101731599 1312.64810993586 94.695 2 -0.027705721932169882 0.013414374066965239 0.11838058365974506 ['ENSG00000132017|ENST00000254337|DCAF15'] 1461 13264 AEEGPPLGAIP True H1975_Epitope_Rep2 1049.53932537101 1049.53822993586 56.149 2 -0.02774185536571931 0.013414374066965239 0.11844795870924439 ['ENSG00000173545|ENST00000308683|ZNF622'] 68305 14484 LTEIMSMGY True H1975_Epitope_Rep3 1043.46675467771 1043.4661749679299 61.072 1 -0.027747649453098447 0.013414374066965239 0.11845876495616402 ['nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 76729 18707 NQTVVRVFL True PC9_epitope_Rep1 1074.61857875122 1074.61748993586 76.745 2 -0.02776311212261511 0.013414374066965239 0.11848760693165268 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 75615 7237 NLDSARFRY True H1975_Epitope_Rep2 1140.5676058075198 1140.56596490379 32.771 3 -0.02777096072025248 0.013414374066965239 0.11850224851929488 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 1809 6299 AEHRIDFVA True NCI_RA007_Epitope_Rep3 1056.53524305008 1056.5341499358601 31.779 2 -0.027778227531232037 0.013414374066965239 0.1185158059066228 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000488235.1_1_3:195969427-195975126:-|nuORF'] 17693 14549 EHMATIEAL True PC9_epitope_Rep1 1013.4851816231699 1013.48408993586 60.787 2 -0.02779194914069023 0.013414374066965239 0.11854140869258907 ['ENSG00000095906|ENST00000262302|NUBP2'] 34989 12836 GQTEVFQAL True NCI_RA007_Epitope_Rep3 991.4974605590297 991.49636993586 57.735 2 -0.027819240218291078 0.013414374066965239 0.11859234185092443 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'THOC6|p.L11V|1|0.09|ENSG00000131652|chr16:3024357-3024357|C/G|missense_variant', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 90877 4049 REVGSLGTSA True NCI_RA007_Epitope_Rep3 975.4985231881899 975.4974299358599 22.395 2 -0.02782027888782553 0.013414374066965239 0.1185942806143971 ['ENSG00000185010|ENST00000360256|F8'] 15411 17419 EAITHLLGV True PC9_epitope_Rep6 951.5389314481898 951.53782993586 79.617 2 -0.02784090773533678 0.013414374066965239 0.11863279065991317 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 40742 4140 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 22.251 3 -0.027851270581700706 0.013414374066965239 0.11865213936774102 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 52388 9463 KKLPPLPSL True NCI_RA007_Epitope_Rep4 991.64300259391 991.64190993586 43.256 2 -0.027864507752364712 0.013414374066965239 0.11867685799215054 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 139535 20490 YLTDIALSL True PC9_epitope_Rep4 1007.55391280599 1007.55280993586 86.964 2 -0.02787405602528483 0.013414374066965239 0.11869469032787743 ['FASTKD2|p.R556T|1|0.22|ENSG00000118246|chr2:206788009-206788009|G/C|missense_variant'] 6794 14450 AQELHTFEV True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 60.404 2 -0.027876467756037897 0.013414374066965239 0.11869919476695238 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 116185 11397 TSVPPGSAL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 48.718 2 -0.027879335894559668 0.013414374066965239 0.11870455180331571 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.G1446W|1|0.48|ENSG00000181555|chr3:47120300-47120300|C/A|missense_variant'] 80379 7459 PGHLQEGFG True PC9_epitope_Rep2 940.4402800360799 940.43918993586 34.065 2 -0.027919097458508447 0.013414374066965239 0.118778834807433 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 135411 14284 WHHTFYNEL True PC9_epitope_Rep2 1245.55670677065 1245.55560993586 60.208 2 -0.027941613805883125 0.013414374066965239 0.11882091446830827 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 112516 16754 TLDSITLMY True H1975_Epitope_Rep2 1055.52089842555 1055.5198099358602 69.682 2 -0.028006214949829755 0.013414374066965239 0.11894170193552363 ['ENSG00000104643|ENST00000221086|MTMR9', 'ENST00000528389.1_1_8:11152715-11157663:+|nuORF', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 89071 13796 QVMQGMGVSA True PC9_epitope_Rep5 1006.4575869763398 1006.45648993586 58.085 2 -0.028012143448626074 0.013414374066965239 0.11895279098276071 ['ENSG00000169813|ENST00000682386|HNRNPF'] 54639 15393 KYLGQLHYL True PC9_epitope_Rep1 1133.62332977849 1133.62168490379 64.027 3 -0.028022432923842384 0.013414374066965239 0.11897203879212517 ['ENSG00000076201|ENST00000265562|PTPN23'] 73349 7610 MTEGSTVNTEY True H1975_Epitope_Rep3 1230.50743318938 1230.50687496793 34.253 1 -0.02804614101388976 0.013414374066965239 0.11901639613573349 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 104524 10622 SQNQVQVVL True NCI_RA007_Epitope_Rep3 1013.5505587610498 1013.54946993586 48.83 2 -0.028074116368830913 0.013433695119090773 0.11906875226100191 ['ENSG00000140688|ENST00000327237|RUSF1', 'nc|ENSG00000140688|Q96GQ5-2|RUSF1', 'ENST00000568491.1_1_16:31502158-31504599:-|nuORF'] 139058 17749 YLDAIPPTFY True H1975_Epitope_Rep2 1198.5910265907 1198.58992993586 73.592 2 -0.028093308093602196 0.013433695119090773 0.11910467902200594 ['nc|ENSG00000092969|P61812-2|TGFB2'] 98920 15465 SHADVVNLL True PC9_epitope_Rep4 966.51344497634 966.51234993586 67.415 2 -0.028099638775855508 0.013433695119090773 0.1191165316665044 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 73533 15847 MVPEDVPRL True PC9_epitope_Rep2 1054.5481162329 1054.5470099358602 66.215 2 -0.028119898110510126 0.013433695119090773 0.11915446780631955 ['ENSG00000272333|ENST00000420124|KMT2B'] 103334 13780 SPMPGTLTA True PC9_epitope_Rep1 873.4266041178901 873.4260549679301 57.851 1 -0.028148408055967626 0.013433695119090773 0.11920786768540612 ['ENSG00000113456|ENST00000382038|RAD1'] 52511 12711 KLAPPLVTL True NCI_RA007_Epitope_Rep4 950.6164534929001 950.61534993586 55.947 2 -0.02816590470430158 0.013433695119090773 0.1192406476205291 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 134363 6100 VYPERSTSY True PC9_epitope_Rep2 1100.51383889916 1100.51274993586 28.856 2 -0.028205034582071083 0.013433695119090773 0.1193139800831466 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 87229 15407 QPLGTLPQA True PC9_epitope_Rep1 923.5076313199098 923.50652993586 64.081 2 -0.02821933209784588 0.01345415778251599 0.1193407825817841 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 2986 17001 AFGYYGPLR True PC9_epitope_Rep3 1042.5236157372199 1042.5225099358602 70.553 2 -0.02822556134677019 0.01345415778251599 0.1193524614064774 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 40652 8553 HRPELIDYGK True PC9_epitope_Rep1 1226.64077074778 1226.6391149037902 37.736 3 -0.02825733602133039 0.01345415778251599 0.11941204611535935 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 118465 16205 TYPKIWVKV True PC9_epitope_Rep5 1132.66446631448 1132.6633699358601 67.323 2 -0.02835619519503033 0.013474617828283905 0.11959756188397261 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 33840 7708 GLNTEENPP True H1975_Epitope_Rep2 969.44033960573 969.43924993586 34.604 2 -0.028356830141403288 0.013474617828283905 0.11959875405069009 ['ENST00000457356.8_1_8:72965279-72965408:+|nuORF'] 1598 5373 AEFAEVSK True PC9_epitope_Rep2 879.43379767331 879.43270993586 26.055 2 -0.028367598677423295 0.013474617828283905 0.11961897416776 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 8598 18600 ATWLALNV True PC9_epitope_Rep6 886.4912529797799 886.49014993586 84.188 2 -0.028390447919893556 0.013492486411595438 0.11966188614798529 ['ENST00000538588.2_1_7:99821243-99844125:-|nuORF', 'nc|ENSG00000291122|Q8NAP1|CASTOR3P', 'ENSG00000274070|ENST00000616305|CASTOR2'] 82391 18320 PPLPLPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 75.796 2 -0.02839323784075884 0.013492486411595438 0.11966712648778345 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 78561 13941 NYQGHFHLF True PC9_epitope_Rep6 1161.5355774032498 1161.53392490379 65.473 3 -0.02840131449480333 0.013492486411595438 0.11968229785839034 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 6688 10879 AQAEVYKEL True PC9_epitope_Rep3 1049.53932537101 1049.53822993586 46.827 2 -0.02842278387818569 0.013492486411595438 0.11972263294357272 ['ENSG00000169710|ENST00000306749|FASN'] 127416 19923 VNEVAILSL True PC9_epitope_Rep4 956.5542471591599 956.55369496793 84.768 1 -0.02843665685948901 0.013492486411595438 0.11974870150185624 ['ENST00000455385.6_1_7:105731299-105731344:-|nuORF'] 11919 19357 DHLSSLII True PC9_epitope_Rep3 896.49673228304 896.49562993586 79.679 2 -0.028455662967024516 0.013492486411595438 0.11978442206918145 ['ENSG00000179299|ENST00000381782|NSUN7', 'NSUN7|p.I262Nfs*5|1|0.11|ENSG00000179299|chr4:40774909-40774910|-/ACACTAACACC|frameshift_variant', 'nc|ENSG00000179299|Q8NE18-3|NSUN7', 'ENST00000473399.5_1_4:40752710-40776973:+|nuORF', 'NSUN7|p.T340Hfs*6|1|0.32|ENSG00000179299|chr4:40776235-40776236|-/T|frameshift_variant', 'nc|ENSG00000179299|Q8NE18-2|NSUN7'] 3731 12763 AGSIHGALQAI True PC9_epitope_Rep2 1036.5665431783598 1036.5654499358602 54.399 2 -0.028468930511942138 0.013492486411595438 0.11980936182746083 ['ENSG00000169208|ENST00000641040|OR10G3'] 54377 10885 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.5338699358601 49.634 2 -0.028476174993870097 0.013492486411595438 0.11982298121653873 ['ENSG00000123975|ENST00000314355|CKS2'] 25772 7241 FETPSKLA True H1975_Epitope_Rep2 891.4701831820298 891.46908993586 32.786 2 -0.02850094215542961 0.013492486411595438 0.11986955080511245 ['ENSG00000198146|ENST00000356321|ZNF770'] 109049 19014 TAISLFYEL True NCI_RA007_Epitope_Rep3 1055.5539128059902 1055.55337496793 83.073 1 -0.028523469960889218 0.013492486411595438 0.11991192067452981 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 35711 5558 GTFGGLGSK True NCI_RA007_Epitope_Rep3 822.42356734278 822.42246993586 28.857 2 -0.028555230083630322 0.013492486411595438 0.11997167220442946 ['ENSG00000124942|ENST00000378024|AHNAK'] 80077 14589 PFLGAPAAT True PC9_epitope_Rep3 843.44905381463 843.44794993586 61.243 2 -0.028568184460352006 0.013492486411595438 0.11999604971173808 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant'] 134607 16959 VYSKDNPNLLF True PC9_epitope_Rep4 1308.67140216972 1308.6703099358601 73.225 2 -0.028580892445458864 0.013513225483300296 0.12001996690693656 ['ENSG00000174231|ENST00000304992|PRPF8'] 127712 7254 VPAPAPAAA True PC9_epitope_Rep5 763.42283906679 763.42174993586 32.867 2 -0.028612920317115677 0.013513225483300296 0.12008026000035807 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 42495 6112 IEEIHSVSA True H1975_Epitope_Rep2 983.49237517859 983.49126993586 28.489 2 -0.028621981503760014 0.013534251246856217 0.1200973216824487 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 6780 16172 AQDPTAFSV True PC9_epitope_Rep2 934.4396113297399 934.43850993586 67.459 2 -0.028641094214215616 0.013550366456451338 0.12013331532051566 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 54895 7146 KYPNVFKKI True NCI_RA007_Epitope_Rep4 1135.67536535135 1135.67371490379 34.108 3 -0.02866810688203653 0.013550366456451338 0.12018419918853541 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 77948 12488 NVLELNDVR True PC9_epitope_Rep2 1070.5720224816198 1070.57092993586 53.344 2 -0.028673348766590702 0.013550366456451338 0.12019407508258934 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRD|p.R286T|1|0.42|ENSG00000153707|chr9:8521381-8521381|C/G|missense_variant'] 30885 10495 GAPQVVAVTG True PC9_epitope_Rep5 897.4919812557698 897.49088993586 45.356 2 -0.02870673163307366 0.013550366456451338 0.12025698280902601 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 125324 9084 VIPELNGK True PC9_epitope_Rep3 868.50181766348 868.50072993586 39.881 2 -0.028713814766137654 0.013550366456451338 0.12027033343098147 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 91619 17548 RIPAYFVTV True PC9_epitope_Rep6 1064.60186605792 1064.6007699358602 80.138 2 -0.0287355589069513 0.013550366456451338 0.12031132424468673 ['ENSG00000204394|ENST00000375663|VARS1', 'ENST00000461874.1_1_6:31749609-31749932:-|nuORF', 'ENST00000483275.1_1_6:31749724-31750195:-|nuORF'] 108616 23863 SYPNVFLVF True PC9_epitope_Rep1 1084.5593325396 1084.55822993586 96.591 2 -0.028771488091586066 0.013550366456451338 0.12037907716969193 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 85686 13033 QGTLSVVTV True PC9_epitope_Rep4 902.50729696674 902.5067449679301 58.025 1 -0.028779140976701756 0.013550366456451338 0.1203935119085828 ['CON__Q2UVX4'] 108473 15300 SYLTSASSL True PC9_epitope_Rep6 927.45492704071 927.45382993586 70.969 2 -0.028786828939709602 0.013550366456451338 0.12040801402186316 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 137354 7514 YDNEFGYSNR True NCI_RA007_Epitope_Rep2 1263.5156298043098 1263.5150749679299 33.852 1 -0.02879558691354435 0.013550366456451338 0.12042453601857685 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 9714 19927 AYGLVSATF True PC9_epitope_Rep4 927.47018318203 927.46963496793 84.783 1 -0.028800635753561118 0.013550366456451338 0.12043406141669093 ['ENSG00000156875|ENST00000370152|MFSD14A'] 95952 8357 RYLENGKETL True PC9_epitope_Rep3 1221.6353510141698 1221.63424993586 37.113 2 -0.028810358542380794 0.013550366456451338 0.1204524063989888 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 87032 8641 QMTDQVADLR True H1975_Epitope_Rep1 1175.5604718217498 1175.55936993586 38.166 2 -0.028812435196374248 0.013550366456451338 0.12045632488657956 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 97296 12051 SEALLGVAA True H1975_Epitope_Rep2 829.4545331178899 829.4539849679301 51.435 1 -0.02882305383407449 0.013550366456451338 0.1204763628298918 ['ENST00000591274.1_2_17:76972225-76973496:-|nuORF', 'ENST00000588899.1_1_17:76973220-76975958:-|nuORF', 'ENST00000587310.5_1_17:76973066-76975958:-|nuORF', 'ENST00000589906.5_2_17:76970879-76975958:-|nuORF', 'ENST00000262776.7_1_17:76972225-76976165:-|nuORF', 'ENST00000586720.5_1_17:76967660-76975958:-|nuORF'] 41076 8345 HTMEFALVK True NCI_RA007_Epitope_Rep5 1074.55320161334 1074.55210993586 38.772 2 -0.02882750540050042 0.013550366456451338 0.12048476386531551 ['ENSG00000182636|ENST00000649030|NDN'] 75265 5593 NIHLNLDRR True NCI_RA007_Epitope_Rep4 1149.6366884268498 1149.6350549037902 28.113 3 -0.02883283371815482 0.013550366456451338 0.1204948200485603 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A'] 132058 14080 VTTGAVVPV True PC9_epitope_Rep2 841.4909186266099 841.48982993586 59.434 2 -0.028836291247652888 0.013550366456451338 0.12050134578797234 ['ENST00000520272.6_1_8:38089657-38090580:+|nuORF', 'ENST00000533100.5_1_8:38089049-38090580:+|nuORF', 'ENST00000397166.6_1_8:38089123-38090580:+|nuORF'] 99777 20739 SIITKDLFQV True PC9_epitope_Rep1 1162.65977485686 1162.6586699358602 84.599 2 -0.028850576534129833 0.013550366456451338 0.12052831043349817 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 122078 14882 VGAAALFL True H1975_Epitope_Rep1 760.44832553864 760.4477749679301 62.478 1 -0.028908147129162422 0.01356849212942254 0.12063702212456878 ['ENST00000257700.6_1_7:105205780-105205849:+|nuORF'] 33191 12262 GIYRANRWHL True PC9_epitope_Rep1 1284.68397297244 1284.68233490379 52.027 3 -0.028955875859630397 0.01356849212942254 0.12072720085358343 ['nc|nan|Q9H3H3-1|C11orf68', 'nc|nan|Q9H3H3|C11orf68', 'ENSG00000175573|ENST00000438576|C11orf68'] 104476 18453 SQLRDYITL True PC9_epitope_Rep4 1107.5924235730301 1107.5913299358601 79.05 2 -0.028967921637219233 0.01356849212942254 0.1207499675592477 ['ENSG00000175595|ENST00000311895|ERCC4'] 69702 10944 LVEEPQNLIK True NCI_RA007_Epitope_Rep1 1181.6655885132898 1181.66448993586 46.563 2 -0.028977205314031747 0.01356849212942254 0.12076751588613961 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 24098 19184 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5797699358602 78.829 2 -0.028983896786790156 0.01356849212942254 0.12078016543755836 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant'] 480 9217 AAMKALQAL True NCI_RA007_Epitope_Rep5 915.5211732090698 915.52006993586 42.104 2 -0.028989579615270402 0.01356849212942254 0.12079090897162931 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'STAU2|p.K410Ifs*9|1|0.08|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant', 'ENST00000521451.5_1_8:74528012-74659064:-|nuORF'] 2785 12978 AETVNAFLA True H1975_Epitope_Rep2 934.4759968384599 934.47488993586 55.036 2 -0.02900027298550559 0.01356849212942254 0.12081112686355339 ['ENST00000343470.8_2_4:4283598-4285408:-|nuORF'] 70024 19253 LVMGDIPAA True PC9_epitope_Rep5 885.4629896266099 885.46188993586 79.098 2 -0.02900690326184756 0.01356849212942254 0.12082366386799796 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'ENST00000529333.5_1_1:46049729-46070604:+|nuORF'] 104946 13465 SRDEYYHLL True PC9_epitope_Rep2 1194.56693710118 1194.56530490379 57.072 3 -0.02904178133532419 0.01356849212942254 0.12088962871891287 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 142181 21050 YVTSILQSL True PC9_epitope_Rep1 1022.5648118428599 1022.56370993586 85.799 2 -0.02909805548381691 0.01356849212942254 0.1209961126463644 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 88839 7145 QVASTLKQV True PC9_epitope_Rep3 972.5603951687598 972.55928993586 32.496 2 -0.029113301285298966 0.01356849212942254 0.12102497249496473 ['ENSG00000166295|ENST00000299381|ANAPC16'] 28760 9393 FSSPSVHNV True PC9_epitope_Rep1 972.4664947839201 972.46538993586 40.989 2 -0.029163973752767042 0.013587766750436598 0.12112092829888212 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'MUC4|p.L101V|1|0.09|ENSG00000145113|chr3:195791279-195791279|G/C|missense_variant'] 102575 11386 SLVYNLTK True PC9_epitope_Rep1 936.5280324113199 936.52692993586 48.677 2 -0.029174285118682638 0.013587766750436598 0.12114046085716687 ['nc|ENSG00000290503|Q9HBA9|FOLH1B', 'ENST00000529567.5_1_11:89372457-89431764:+|nuORF'] 118322 19421 TYMDRVFKQF True PC9_epitope_Rep5 1333.6488929033296 1333.64725490379 79.751 3 -0.02918971775472169 0.013587766750436598 0.12116969859115813 ['ENSG00000158201|ENST00000289119|ABHD3'] 106682 15491 STTNGGILTV True PC9_epitope_Rep4 961.50802524273 961.50692993586 67.513 2 -0.02920246012924669 0.013587766750436598 0.1211938432097836 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 132371 10237 VVADETPAV True PC9_epitope_Rep4 899.4600124211499 899.45890993586 47.055 2 -0.029209220489959668 0.013587766750436598 0.12120665429152822 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 26230 8782 FHDPDSAVV True PC9_epitope_Rep6 985.4505103666099 985.44940993586 43.677 2 -0.029228113302204907 0.013587766750436598 0.12124246170703618 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 132739 20836 VVIGADTIVTV True PC9_epitope_Rep2 1085.6332257558502 1085.6321299358601 85.591 2 -0.02924863060712619 0.013587766750436598 0.12128135632501609 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL'] 126766 16550 VLPGVDALSNI True H1975_Epitope_Rep1 1096.61282466444 1096.61227496793 69.034 1 -0.029299811983033296 0.013607904936326078 0.1213784184962549 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 5842 15205 APFGGFKMS True PC9_epitope_Rep2 940.4476739156399 940.44656993586 63.749 2 -0.02930245314931878 0.013607904936326078 0.12138342875904294 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 34629 6887 GPYGGAQPSA True PC9_epitope_Rep1 903.40864555463 903.40754993586 31.295 2 -0.02933096620902915 0.013607904936326078 0.1214375268474049 ['ENSG00000239306|ENST00000310137|RBM14'] 27395 17211 FLVQNIHTL True PC9_epitope_Rep4 1083.60767971435 1083.60658993586 74.211 2 -0.029334942347465993 0.013607904936326078 0.12144507213953097 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF'] 35158 17388 GQWSQGLISA True PC9_epitope_Rep6 1045.5192586327698 1045.5181699358602 79.497 2 -0.029408780133385402 0.013628910326029088 0.12158524900106948 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 54124 15015 KVPEIEVTV True PC9_epitope_Rep4 1012.5804619069999 1012.57936993586 65.692 2 -0.029423142844804726 0.013644394303837884 0.12161252882541328 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 9116 22757 AVITGFFTV True PC9_epitope_Rep5 953.5222187548899 953.52112993586 92.533 2 -0.029449970741065565 0.013644394303837884 0.12166349577233929 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 47015 9137 ITRARFEEL True PC9_epitope_Rep2 1133.61930702721 1133.61766490379 40.487 3 -0.029454255759925385 0.013644394303837884 0.12167163771225475 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA6|p.S298F|1|0.15|ENSG00000173110|chr1:161525551-161525551|C/T|missense_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 47963 19821 IYIWDLNNF True NCI_RA007_Epitope_Rep3 1196.5866099165999 1196.58607496793 86.375 1 -0.02948563240120644 0.013644394303837884 0.12173126779989785 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 132912 9200 VVLYSIRN True H1975_Epitope_Rep1 962.5549158655 962.55380993586 40.295 2 -0.029522923877891568 0.013644394303837884 0.12180216514580719 ['ENSG00000176853|ENST00000334705|FAM91A1'] 125327 16377 VIPGMFKEV True PC9_epitope_Rep4 1018.5521389841799 1018.55104993586 70.956 2 -0.02954112906120923 0.013644394303837884 0.12183678664425521 ['ENSG00000122729|ENST00000309951|ACO1'] 90702 5040 REQPPRFAQP True H1975_Epitope_Rep3 1224.6363540736797 1224.63469490379 24.507 3 -0.0295425831154698 0.013644394303837884 0.12183955216936583 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 134082 19109 VYKPVSIYL True PC9_epitope_Rep3 1080.6219327961599 1080.62082993586 78.726 2 -0.029568441631117985 0.013644394303837884 0.12188874080184973 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 109858 9580 TEEPLEVSA True H1975_Epitope_Rep2 973.4604063439699 973.45930993586 41.825 2 -0.02958661504771621 0.013644394303837884 0.1219233189050226 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1', 'ALMS1|p.Y811*|1|0.24|ENSG00000116127|chr2:73448959-73448966|ACTCACAC/-|frameshift_variant', 'ALMS1|p.T1608Dfs*2|1|0.12|ENSG00000116127|chr2:73451340-73451341|-/A|frameshift_variant', 'ALMS1|p.A2503Cfs*22|1|0.17|ENSG00000116127|chr2:73454032-73454033|-/C|frameshift_variant', 'ALMS1|p.A2503Dfs*23|1|0.16|ENSG00000116127|chr2:73454034-73454035|-/ATTC|frameshift_variant'] 38299 7301 HEFLHEVPAA True H1975_Epitope_Rep1 1148.56145779792 1148.55982490379 33.094 3 -0.0295960256020822 0.013644394303837884 0.12194122680144365 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 78643 13364 NYTLVSHLI True NCI_RA007_Epitope_Rep4 1058.5760452329 1058.57494993586 58.561 2 -0.029632271183558302 0.013644394303837884 0.12201021767549883 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 48184 11913 IYPQVLHSL True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 52.481 2 -0.02967050892687453 0.013644394303837884 0.12208302979728926 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 49188 7349 KEMENFEAP True H1975_Epitope_Rep2 1093.4750108622898 1093.47390993586 33.208 2 -0.029671900940980867 0.013644394303837884 0.12208568103141954 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 6412 6349 APRQPGLMA True PC9_epitope_Rep4 939.4960210903898 939.49492993586 31.497 2 -0.02967973318186947 0.013644394303837884 0.1221005990838582 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 28285 12554 FRPLYTHEY True PC9_epitope_Rep3 1224.5927579261997 1224.59110490379 53.309 3 -0.02968885961905828 0.013644394303837884 0.12211798378219424 ['ENSG00000008952|ENST00000337002|SEC62'] 106716 8643 [Acetylation]-STVHEILC[Carbamidomethyl]K True H1975_Epitope_Rep1 1127.56449516876 1127.5633899358602 38.174 2 -0.02969018203533505 0.013644394303837884 0.12212050295868444 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 89827 15382 RAPGIQLL True PC9_epitope_Rep5 866.5337864981 866.53268993586 64.175 2 -0.02970679749383791 0.013644394303837884 0.12215215814168255 ['ENST00000476077.1_1_22:24179058-24181169:-|nuORF'] 54942 21910 KYPSPFFVF True PC9_epitope_Rep5 1130.5800679841798 1130.5794749679299 89.316 1 -0.029715554767993518 0.013644394303837884 0.12216884447727487 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 74456 11351 NEVKSQNLL True PC9_epitope_Rep2 1043.5611234447501 1043.56002993586 48.985 2 -0.02972284229803694 0.013644394303837884 0.1221827315281672 ['ENST00000451029.5_1_7:89905415-89916830:+|nuORF', 'ENST00000475031.5_1_7:89901258-89916830:+|nuORF', 'nc|ENSG00000105792|A5D8W1-2|CFAP69', 'nc|ENSG00000105792|A5D8W1-5|CFAP69', 'ENSG00000105792|ENST00000389297|CFAP69'] 72811 6633 MPFQGSGKSA True PC9_epitope_Rep1 1008.4698659121999 1008.46876993586 30.318 2 -0.029742107937058376 0.013644394303837884 0.12221944922028605 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 85718 12489 QHAEPWVV True PC9_epitope_Rep4 964.4766655447999 964.47556993586 55.847 2 -0.029758026822288952 0.013684344939133395 0.12224979421972226 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 105447 5025 SRVDDAVAA True PC9_epitope_Rep5 902.4457593393399 902.44466993586 24.358 2 -0.029770144016473755 0.013684344939133395 0.12227289583247036 ['ENSG00000244187|ENST00000290079|TMEM141', 'ENST00000465017.5_1_9:139685822-139687379:+|nuORF'] 5708 22059 APALLLIPAA True PC9_epitope_Rep2 948.60080342876 948.59970993586 90.322 2 -0.029774765199875753 0.013684344939133395 0.12228170698435101 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 139620 17190 YLYVDKNFI True PC9_epitope_Rep6 1173.6070110080097 1173.6059099358602 78.71 2 -0.029776157945816766 0.013684344939133395 0.12228436260163005 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 101117 19313 SLGLPLLW True H1975_Epitope_Rep3 897.53238951577 897.53184496793 80.956 1 -0.029800609046206083 0.013684344939133395 0.12233099122451778 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'nc|ENSG00000133816|O94851-2|MICAL2', 'ENST00000530691.5_1_11:12229562-12281716:+|nuORF'] 39744 12536 HLVGIDIFTGK True NCI_RA007_Epitope_Rep1 1198.6710082469 1198.66990993586 52.74 2 -0.029816921553078052 0.013684344939133395 0.12236210627093082 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 67850 20381 LTAPALALA True PC9_epitope_Rep1 839.5116540711899 839.51054993586 83.218 2 -0.029852110355517863 0.013684344939133395 0.12242924528324332 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 48980 5843 KEFEGKTLV True NCI_RA007_Epitope_Rep4 1049.57571087973 1049.57460993586 29.1 2 -0.029860614798329525 0.013684344939133395 0.12244547529067941 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 25420 8523 FEDGQKIVV True H1975_Epitope_Rep3 1033.5444107514497 1033.5433099358602 37.769 2 -0.02986462998354093 0.013684344939133395 0.12245313844854894 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF'] 30701 10348 GALETIWR True H1975_Epitope_Rep3 944.5079656730799 944.50686993586 44.857 2 -0.02988328003429319 0.013704751973782214 0.12248873724477685 ['ENSG00000162461|ENST00000294454|SLC25A34'] 111266 15666 THLGPLASL True PC9_epitope_Rep4 907.51271670035 907.51160993586 68.187 2 -0.029907960937705456 0.013704751973782214 0.12253585860930447 ['ENSG00000127399|ENST00000359623|LRRC61'] 54094 7414 KVLGAFSD True NCI_RA007_Epitope_Rep3 835.44396843419 835.44286993586 36.287 2 -0.029942260107710058 0.013704751973782214 0.12260136422898461 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.G65V|1|0.3|ENSG00000223609|chr11:5234112-5234112|C/A|missense_variant', 'HBB|p.G75C|1|0.37|ENSG00000244734|chr11:5226669-5226669|C/A|missense_variant', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 33333 17355 GKPSPGLVNL True PC9_epitope_Rep5 980.5654805492 980.56438993586 71.755 2 -0.029946361960508473 0.01372544847104888 0.12260919969702075 ['ENST00000592904.5_1_19:9524750-9525065:-|nuORF'] 62604 20063 LLLAQLSDA True PC9_epitope_Rep4 942.53859709502 942.53750993586 85.309 2 -0.029953791744171173 0.01372544847104888 0.12262339314929299 ['ENSG00000175348|ENST00000534025|TMEM9B'] 72797 19941 MPFAGLISA True PC9_epitope_Rep6 905.46807500705 905.4675249679301 89.363 1 -0.02998294731521371 0.013740880182077298 0.12267910134347529 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 92663 15751 RNLVTEVL True PC9_epitope_Rep5 942.5498304850599 942.54872993586 65.585 2 -0.029992341519042388 0.013740880182077298 0.12269705478648632 ['ENST00000591735.2_1_19:1491211-1495711:+|nuORF', 'ENSG00000115255|ENST00000233596|REEP6', 'nc|ENSG00000115255|Q96HR9|REEP6'] 61337 24563 LISDELLLD True PC9_epitope_Rep5 1029.55939210925 1029.55887496793 99.596 1 -0.03000226794529614 0.013740880182077298 0.12271602734542386 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 6320 5562 APRPPTAAP True PC9_epitope_Rep5 876.4817509252399 876.48064993586 26.399 2 -0.030023197953994694 0.013740880182077298 0.12275603790394463 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ZFP90|p.W121Lfs*4|1|0.24|ENSG00000184939|chr16:68563147-68563148|-/T|frameshift_variant', 'ENSG00000184939|ENST00000563169|ZFP90'] 108826 15108 SYVPKVAGL True PC9_epitope_Rep2 932.5331177917599 932.53202993586 63.37 2 -0.030062097142393558 0.013740880182077298 0.12283042296781835 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 8278 22339 ATIFDLSEV True PC9_epitope_Rep2 993.5018772331299 993.50078993586 91.413 2 -0.030064101266636233 0.013740880182077298 0.12283425620357398 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 1437 14244 AEEFPNLAVA True H1975_Epitope_Rep2 1059.5236753068698 1059.52317496793 59.939 1 -0.030106502080529507 0.013740880182077298 0.12291537452324887 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 32962 9156 GIDSSSPEV True PC9_epitope_Rep4 889.4028914678499 889.40178993586 42.811 2 -0.030109895398340584 0.013740880182077298 0.12292186798640635 ['ENSG00000169564|ENST00000303577|PCBP1'] 48886 4733 KEAVTTIAA True NCI_RA007_Epitope_Rep5 902.5072969667399 902.50618993586 24.89 2 -0.03011809405835051 0.013740880182077298 0.12293755794604606 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 108749 12269 SYSGTFHSL True PC9_epitope_Rep5 997.4505103666099 997.44940993586 52.181 2 -0.03013000324893025 0.013740880182077298 0.12296035129866696 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1'] 58971 7021 LEVAKSLSA True H1975_Epitope_Rep2 916.5229470308799 916.52184993586 31.931 2 -0.030141250263637315 0.013740880182077298 0.12298187997676777 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 71015 21061 LYIPIFSTF True NCI_RA007_Epitope_Rep3 1099.59538369515 1099.5942899358602 91.628 2 -0.030166100701567628 0.013740880182077298 0.12302945713849396 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'MTMR12|p.F493L|1|0.16|ENSG00000150712|chr5:32234995-32234995|G/T|missense_variant'] 74554 13675 NFTNVAATF True NCI_RA007_Epitope_Rep4 983.4712458111899 983.47014993586 59.823 2 -0.030187677221167022 0.013740880182077298 0.12307077657456011 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 64024 10641 LPAEAVEAA True PC9_epitope_Rep4 869.4494477374499 869.44834993586 48.68 2 -0.030198615998745498 0.013740880182077298 0.12309172820224226 ['ENSG00000130706|ENST00000253003|ADRM1'] 133353 18170 VVVEYLRAV True PC9_epitope_Rep5 1046.6124307416198 1046.61132993586 74.901 2 -0.030201804245167153 0.013740880182077298 0.12309783528585932 ['ENSG00000180104|ENST00000512944|EXOC3', 'ENST00000515601.6_1_5:465213-467010:+|nuORF', 'ENST00000505947.1_1_5:465213-465961:+|nuORF'] 98996 4011 SHDHGYTTL True PC9_epitope_Rep4 1029.45157299577 1029.4504699358602 21.673 2 -0.030204381894163856 0.013740880182077298 0.1231027729237352 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 108940 15885 TADSYLLQL True NCI_RA007_Epitope_Rep3 1022.52842633414 1022.5273299358599 70.14 2 -0.030206538316452862 0.013740880182077298 0.1231069037823471 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 119178 12727 VAKGGLGLI True PC9_epitope_Rep3 826.5276384884999 826.52654993586 53.975 2 -0.030230284263095868 0.013740880182077298 0.12315239803364672 ['ENSG00000101843|ENST00000217958|PSMD10'] 55581 9280 LAHGALPVAT True PC9_epitope_Rep5 948.53926580136 948.53816993586 40.644 2 -0.030231250351548757 0.013740880182077298 0.12315424918383039 ['ENSG00000181778|ENST00000377311|TMEM252'] 103863 7597 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 36.604 2 -0.030237735059758387 0.013740880182077298 0.12316667521980564 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 141893 11986 YVDRGYYSV True PC9_epitope_Rep5 1120.5189242796 1120.5178299358602 51.1 2 -0.03027453410285585 0.013760980071038134 0.12323720617896204 ['ENSG00000104695|ENST00000221138|PPP2CB', 'PPP2CB|p.E95D|1|0.18|ENSG00000104695|chr8:30799573-30799573|C/G|missense_variant', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 107790 16111 SVTFVAEQV True PC9_epitope_Rep6 978.5022115862997 978.50110993586 74.31 2 -0.030334273118392308 0.013760980071038134 0.12335176452657151 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 73716 17759 MYSDVWKQL True PC9_epitope_Rep6 1168.5586809166 1168.55758993586 80.943 2 -0.030340215231903923 0.013760980071038134 0.12336316342630188 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 23892 11455 EYISTVKTL True PC9_epitope_Rep6 1052.57537652656 1052.57426993586 55.123 2 -0.030385729930504268 0.013760980071038134 0.12345049951574094 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 95817 9988 RYIPTAAAF True NCI_RA007_Epitope_Rep5 1008.5392658013599 1008.5386749679301 45.061 1 -0.030396809873627254 0.013781662732087028 0.12347176678067312 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 32801 13074 GHFPSPIRL True PC9_epitope_Rep4 1022.5661492555399 1022.56504993586 58.181 2 -0.030404014437618948 0.013781662732087028 0.1234855968534672 ['ENSG00000062822|ENST00000440232|POLD1'] 117608 20692 TVTDSMFAV True PC9_epitope_Rep1 969.4477334852899 969.44662993586 84.415 2 -0.03042574167776658 0.013801169590643274 0.12352731152332626 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 98963 7720 SHAQTVVL True PC9_epitope_Rep5 853.46576650793 853.46466993586 34.636 2 -0.030430926572739284 0.013801169590643274 0.12353726757116243 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 138868 11659 YKDGTELEL True PC9_epitope_Rep6 1066.51825557326 1066.51767496793 55.975 1 -0.030440203814172343 0.013801169590643274 0.12355508313599413 ['ENSG00000143815|ENST00000272163|LBR'] 1574 10309 AEEVFQHIP True H1975_Epitope_Rep2 1068.5240096600398 1068.52290993586 44.66 2 -0.03044220504883095 0.013801169590643274 0.12355892644278102 ['ENSG00000067704|ENST00000366922|IARS2', 'ENST00000467924.1_1_1:220313569-220316509:+|nuORF'] 10938 21668 DAFLGSFLYEY True H1975_Epitope_Rep1 1323.60231955039 1323.60177496793 90.036 1 -0.03045244578405578 0.013801169590643274 0.12357859473808852 ['CON__P02769'] 77076 16875 NRLEEPGNFVL True PC9_epitope_Rep6 1286.6619001151798 1286.66080993586 77.427 2 -0.030452500926726512 0.013801169590643274 0.12357870065062904 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 8893 18613 AVFPSIVG True PC9_epitope_Rep6 788.4432401582 788.44269496793 84.238 1 -0.03046399601492311 0.013820377615240687 0.12360078063833212 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 33387 17170 GLAAGGIVAV True PC9_epitope_Rep6 826.4912529797799 826.49014993586 78.63 2 -0.03046974060120795 0.013820377615240687 0.12361181597200402 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 45449 17082 IQINVGTTV True PC9_epitope_Rep4 943.53384606775 943.53329496793 73.702 1 -0.030485331370192475 0.013820377615240687 0.12364176922443555 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 96499 7840 SADETWDSA True NCI_RA007_Epitope_Rep3 980.37231961556 980.37177496793 37.962 1 -0.030520672882310303 0.013820377615240687 0.12370968650602909 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 107733 4973 SVSGYIYHK True NCI_RA007_Epitope_Rep5 1052.52909504048 1052.5279899358602 25.831 2 -0.030528697265044365 0.013820377615240687 0.12372511089123203 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 114703 15243 TQIDHYVGI True PC9_epitope_Rep3 1044.52400966004 1044.52290993586 63.78 2 -0.030539990914163484 0.013820377615240687 0.12374682167648535 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 9856 8813 AYLHTTTTF True NCI_RA007_Epitope_Rep5 1053.51311062317 1053.51200993586 40.564 2 -0.030559365292843522 0.013820377615240687 0.12378407289450982 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 71120 24074 LYLPFSLTF True PC9_epitope_Rep2 1099.59538369515 1099.5942899358602 98.103 2 -0.030580848968377258 0.013840756883172106 0.12382538872226334 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 24893 16592 FAYEGPMYL True H1975_Epitope_Rep3 1089.4841189940098 1089.48302993586 69.318 2 -0.03059074667272479 0.013840756883172106 0.12384442646452326 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 40607 11498 HRIPEPEAAVL True PC9_epitope_Rep4 1230.67207087606 1230.67042490379 51.988 3 -0.030611719632111383 0.013840756883172106 0.1238847735878331 ['ENSG00000101255|ENST00000217233|TRIB3'] 103100 14792 SPHGIIVIA True PC9_epitope_Rep1 905.5334521449299 905.5329049679301 61.718 1 -0.030629314292849884 0.013860544217687076 0.12391862864586996 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 17613 6662 EHINSVSAM True PC9_epitope_Rep2 986.44913046762 986.44802993586 31.031 2 -0.03063424605484232 0.013860544217687076 0.12392811932348678 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 38809 13592 HGYLGIVEL True NCI_RA007_Epitope_Rep3 999.5389314481899 999.53782993586 60.761 2 -0.03066211517021739 0.013860544217687076 0.12398176005045705 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555371.1_1_14:35871898-35872434:-|nuORF'] 1347 6550 AEEAARKLLP True H1975_Epitope_Rep2 1096.62405805448 1096.62296993586 30.105 2 -0.030687311522154762 0.013860544217687076 0.12403027020401779 ['nc|ENSG00000088298|Q9BV94-2|EDEM2', 'ENSG00000088298|ENST00000374492|EDEM2'] 47691 14755 IYAGQWNDF True NCI_RA007_Epitope_Rep4 1112.49270953176 1112.4916099358602 64.21 2 -0.030697301511894287 0.013860544217687076 0.12404950740613747 ['ENST00000582147.1_1_18:320047-333168:-|nuORF', 'ENSG00000158270|ENST00000400256|COLEC12'] 97487 3563 SEEKPVPAA True H1975_Epitope_Rep1 926.4709114580198 926.46980993586 18.038 2 -0.03071240802041303 0.013879147271993028 0.12407860113323566 ['nc|ENSG00000189159|Q9UK76-3|JPT1', 'ENSG00000189159|ENST00000409753|JPT1'] 42191 19369 IDRINLVI True PC9_epitope_Rep2 954.5862159937799 954.58510993586 79.879 2 -0.030718568292846055 0.013879147271993028 0.1240904665953995 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 31444 13224 GEALDALRPW True H1975_Epitope_Rep1 1126.5771078620598 1126.5760099358602 55.964 2 -0.030755781315353642 0.013879147271993028 0.12416216022774289 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 108349 16753 SYLDSIHFF True NCI_RA007_Epitope_Rep3 1127.52876068731 1127.52766993586 73.742 2 -0.030756160433099245 0.013879147271993028 0.12416289077310202 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 35165 17369 GQWYGPNTV True PC9_epitope_Rep3 1020.4664947839199 1020.46538993586 71.981 2 -0.030759043019331172 0.013879147271993028 0.12416844550326497 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 10109 15986 AYVEDTVLF True NCI_RA007_Epitope_Rep4 1055.51752729727 1055.51642993586 69.363 2 -0.030786997517272475 0.013879147271993028 0.12422232258548967 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 71119 21991 LYLPFSLTF True NCI_RA007_Epitope_Rep5 1099.59538369515 1099.5942899358602 91.722 2 -0.03079140617010836 0.013879147271993028 0.12423082091415566 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 127669 10260 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.4914349679301 44.348 1 -0.03081171291614148 0.013879147271993028 0.12426997034214236 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 58633 6900 LERDPIPAA True H1975_Epitope_Rep1 980.5290950404798 980.52798993586 31.581 2 -0.030825661542290116 0.013879147271993028 0.12429686686566696 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000493232.5_1_7:2583168-2583660:-|nuORF', 'nc|ENSG00000106009|Q6PJG6-2|BRAT1', 'ENST00000469750.5_1_7:2583168-2595320:-|nuORF'] 26923 9558 FLDHKTLYY True H1975_Epitope_Rep2 1198.60225998074 1198.60116993586 41.739 2 -0.030884803823187788 0.013895971443141255 0.12441095294567386 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000444292.2_1_X:95228575-95229244:-|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5', 'nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7'] 102984 16393 SPFGSITSA True PC9_epitope_Rep2 865.4181476091701 865.4175949679301 68.301 1 -0.030913923629522597 0.013895971443141255 0.12446715188664353 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 71289 19057 LYQDGVFKF True PC9_epitope_Rep4 1115.56514619603 1115.56404993586 81.393 2 -0.030922007627326702 0.013895971443141255 0.12448275647260296 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 106920 7527 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4499749679298 33.934 1 -0.03092523293197578 0.013895971443141255 0.1244889826726623 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 79366 5047 PASGPIRPIVR True NCI_RA007_Epitope_Rep5 1161.6982260542497 1161.6965849037902 26.113 3 -0.03093417002306284 0.013895971443141255 0.12450623615480012 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 59230 7418 LFERLTLKHD True NCI_RA007_Epitope_Rep3 1270.70337100434 1270.70173490379 36.304 3 -0.03095722010025899 0.013895971443141255 0.12455074304373331 ['ENSG00000087086|ENST00000331825|FTL'] 69067 20017 LTQPVYDQI True PC9_epitope_Rep4 1075.55497543515 1075.5538699358601 85.129 2 -0.03096696367487189 0.013895971443141255 0.12456955999716617 ['ENSG00000189233|ENST00000413272|NUGGC'] 52617 5397 KLLRKARRKLI True H1975_Epitope_Rep1 1393.9721564897297 1393.97104993586 25.817 2 -0.030988335556492302 0.013895971443141255 0.12461084059616179 ['ENST00000402913.2_1_X:26704220-26705692:+|nuORF'] 66037 14375 LSEFQLEGY True H1975_Epitope_Rep2 1084.5076908895599 1084.5065899358601 60.443 2 -0.031005816078244007 0.013895971443141255 0.12464461189821466 ['ENSG00000177303|ENST00000321617|CASKIN2', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2', 'CASKIN2|p.N496K|1|0.4|ENSG00000177303|chr17:75503942-75503942|G/C|missense_variant'] 88541 8749 QTATTTMVY True H1975_Epitope_Rep3 1014.4691972058599 1014.46867496793 38.657 1 -0.03101223272420194 0.013895971443141255 0.12465701005014133 ['ENSG00000198218|ENST00000395443|QRICH1'] 2677 7172 AESPGVPVA True NCI_RA007_Epitope_Rep3 825.4232329896099 825.42212993586 35.326 2 -0.031054101644013187 0.013895971443141255 0.12473792945531059 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 12353 18526 DIRNYFQV True PC9_epitope_Rep4 1053.5243440132099 1053.5232499358601 79.334 2 -0.031065138221500744 0.013895971443141255 0.12475926570493491 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 45120 21299 IPLTLLPAA True PC9_epitope_Rep5 907.5742543277498 907.57314993586 86.978 2 -0.031066062763471132 0.013895971443141255 0.1247610531719834 ['ENSG00000116903|ENST00000366645|EXOC8'] 90327 5550 REFDRRFSP True NCI_RA007_Epitope_Rep4 1208.6050539453997 1208.60341490379 27.945 3 -0.031068236597928504 0.013895971443141255 0.12476525603338963 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 90095 5051 REAHPPISV True H1975_Epitope_Rep3 1004.5403284305199 1004.53922993586 24.551 2 -0.031069072753653212 0.013895971443141255 0.12476687267126688 ['ENST00000466317.1_1_17:17124695-17126113:-|nuORF', 'nc|ENSG00000154803|Q8NFG4-2|FLCN'] 39902 17882 HPFGFVAV True PC9_epitope_Rep2 872.4544735482399 872.45336993586 74.085 2 -0.03110336632748493 0.013913967073818374 0.1248331888984156 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 87742 8658 QRAQMTAAL True PC9_epitope_Rep3 988.5123994305198 988.51130993586 38.254 2 -0.03114108476334817 0.013913967073818374 0.1249061561062578 ['ENSG00000114315|ENST00000232424|HES1'] 71290 20056 LYQDGVFKF True PC9_epitope_Rep5 1115.56514619603 1115.56404993586 82.199 2 -0.031143687147883747 0.013913967073818374 0.12491119156451519 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 92947 19543 RPGTALELLEA True PC9_epitope_Rep5 1168.6451874218799 1168.6440899358602 80.225 2 -0.031145465396662225 0.013913967073818374 0.12491463244988406 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 86021 8469 QHQEHFIQM True PC9_epitope_Rep2 1196.5396768075198 1196.53804490379 37.943 3 -0.031148527621475307 0.013913967073818374 0.12492055796318684 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 10046 21209 AYSPAIQMF True PC9_epitope_Rep5 1026.4844533471799 1026.4833499358601 86.629 2 -0.031156061510558598 0.013913967073818374 0.12493513712950256 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2'] 107906 14485 SVVSDILFK True NCI_RA007_Epitope_Rep1 1006.5698972233 1006.56880993586 60.388 2 -0.031162273918874425 0.013913967073818374 0.12494715992121204 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 136016 12119 WQYRQLSAL True NCI_RA007_Epitope_Rep5 1163.60874234351 1163.60764993586 53.27 2 -0.031190079883858617 0.013913967073818374 0.12500098220799552 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 128587 13128 VPTNIIAA True PC9_epitope_Rep6 797.4647038787699 797.46360993586 62.129 2 -0.03120067098964385 0.013913967073818374 0.12502148695702986 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 5890 6951 APGIPRKD True PC9_epitope_Rep2 852.4817509252399 852.48064993586 32.136 2 -0.031207464519599444 0.013913967073818374 0.12503464068717865 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 102869 10782 SPAAPVITA True PC9_epitope_Rep6 825.45961849833 825.45852993586 52.304 2 -0.0312077308239414 0.013913967073818374 0.12503515632888604 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 5281 18075 ALQEKLWNV True PC9_epitope_Rep5 1099.60259433391 1099.6014899358602 74.54 2 -0.031217752784184108 0.013934913756478885 0.12505456278802607 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 7887 2613 ATAGIIGVNRK True NCI_RA007_Epitope_Rep3 1098.65094150866 1098.6498499358602 14.743 2 -0.031246821961316517 0.01395437746909647 0.12511086389368511 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 29350 18320 FVDGSAIQV True PC9_epitope_Rep3 934.47599683846 934.47488993586 75.676 2 -0.03126904772628997 0.01395437746909647 0.12515392247435136 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 114530 12120 TQAPGNPVL True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 51.608 2 -0.03128893947659976 0.01395437746909647 0.12519246796012776 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 87382 5903 QPTSVLDKA True PC9_epitope_Rep6 957.5131106231698 957.51200993586 30.972 2 -0.031323282643716664 0.01395437746909647 0.12525903610194203 ['ENSG00000165507|ENST00000298295|DEPP1'] 93471 12361 RQIIAVVL True NCI_RA007_Epitope_Rep1 910.5963867546599 910.59528993586 52.056 2 -0.031323588904080234 0.01395437746909647 0.12525962984301203 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 85377 15359 QEVAVKEQLT True PC9_epitope_Rep4 1143.6135529404298 1143.61244993586 67.01 2 -0.031339926434079665 0.01395437746909647 0.12529130590747237 ['ENSG00000197892|ENST00000524189|KIF13B'] 98960 7932 SHAQTVVL True PC9_epitope_Rep3 853.46576650793 853.46466993586 35.49 2 -0.031365747081935104 0.013973836221542644 0.12534137958868208 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 8103 14833 ATDYTFAMY True H1975_Epitope_Rep2 1081.44264810485 1081.44207496793 62.212 1 -0.03137444548860249 0.013973836221542644 0.12535825140995888 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 107102 8949 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 44.408 2 -0.031382564574195526 0.013973836221542644 0.12537400096497384 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 85428 12386 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45416993586 52.676 2 -0.03139545284418384 0.013973836221542644 0.12539900467150014 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 64154 19079 LPFISYPQI True NCI_RA007_Epitope_Rep3 1076.5906326678798 1076.5895299358601 83.341 2 -0.03144827839416542 0.013973836221542644 0.12550152400975026 ['ENST00000482658.1_1_2:102626076-102632522:+|nuORF', 'nc|ENSG00000115590|P27930-2|IL1R2', 'ENSG00000115590|ENST00000332549|IL1R2'] 114161 5737 TPKMPGQSV True PC9_epitope_Rep6 943.47970231991 943.47860993586 30.226 2 -0.031459130537352234 0.013973836221542644 0.1255225920689243 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 75 19184 AAAGVFALL True NCI_RA007_Epitope_Rep5 831.4854393233499 831.48489496793 80.659 1 -0.03150073087973531 0.013994478657889149 0.12560337640895414 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 42327 8630 IEAELEKVA True H1975_Epitope_Rep1 1000.5440763982799 1000.54296993586 38.123 2 -0.03150894659681953 0.013994478657889149 0.1256193348657736 ['ENSG00000100604|ENST00000216492|CHGA'] 106858 13956 SVATELNAV True PC9_epitope_Rep6 902.4709114580199 902.46980993586 65.535 2 -0.0315888961575813 0.014013631441493089 0.12577470417055023 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.W1179Cfs*25|1|0.06|ENSG00000003393|chr2:201723411-201723423|ATCTTGCCACATT/-|frameshift_variant', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF', 'nc|ENSG00000003393|Q96Q42-2|ALS2', 'nc|ENSG00000003393|Q96Q42-3|ALS2', 'ENST00000482789.5_1_2:202606311-202633608:-|nuORF'] 24538 4291 FAGDDAPR True NCI_RA007_Epitope_Rep1 847.38243080679 847.38132993586 20.801 2 -0.03159632215893875 0.014013631441493089 0.12578914213548503 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 68578 11806 LTGVEVEY True H1975_Epitope_Rep1 908.4491133842798 908.4485649679301 50.406 1 -0.031600647442544115 0.014013631441493089 0.12579755207137316 ['CON__Q0V8M9'] 4691 12980 ALASHLIEA True PC9_epitope_Rep5 923.5076313199099 923.50652993586 54.936 2 -0.03160284059971371 0.014013631441493089 0.1258018165201727 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 117896 4846 TWKSNDTAASE True H1975_Epitope_Rep3 1208.5309455152799 1208.52984993586 23.766 2 -0.03160605429551569 0.014013631441493089 0.1258080655183706 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 111397 14590 THSGYFSSL True PC9_epitope_Rep3 997.45051036661 997.44940993586 61.247 2 -0.031645153908347066 0.014013631441493089 0.12588411141601963 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2'] 141511 20179 YTLDGGDIINA True PC9_epitope_Rep5 1150.5506183307 1150.55007496793 82.666 1 -0.03165251174067626 0.014013631441493089 0.12589842539804597 ['ENSG00000204628|ENST00000512805|RACK1'] 134329 23644 VYPALTFIL True PC9_epitope_Rep2 1035.60046907559 1035.59936993586 96.418 2 -0.03166268560395915 0.014034566223618837 0.12591821955203822 ['nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 48976 5502 KEFDGKSLVS True NCI_RA007_Epitope_Rep3 1108.5764391557198 1108.57534993586 28.644 2 -0.031665266326842974 0.0140552016985138 0.12592324091781598 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000517330.1_1_5:77337712-77337985:-|nuORF', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 44766 16049 IMDSGELDFY True H1975_Epitope_Rep3 1188.50089125696 1188.49978993586 67.189 2 -0.03168171288737566 0.0140552016985138 0.12595524456592463 ['ENSG00000101216|ENST00000370077|GMEB2'] 95568 17540 RWSPVRPLVF True PC9_epitope_Rep6 1255.71896149883 1255.7173049037901 80.108 3 -0.031707047996731776 0.014074341392998917 0.12600455554181395 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 85151 4103 QEMQEVQSSR True PC9_epitope_Rep3 1220.5455500336 1220.54444993586 20.9 2 -0.03173315322808379 0.014074341392998917 0.1260553793310298 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 54738 7476 KYMEDYHQF True NCI_RA007_Epitope_Rep4 1259.52810906431 1259.5270099358602 35.403 2 -0.03174603869184564 0.014074341392998917 0.1260804709964859 ['ENSG00000118898|ENST00000345988|PPL'] 28754 14950 FSSPPVIL True H1975_Epitope_Rep2 858.4851049701799 858.4845549679301 62.657 1 -0.031750076329851114 0.014074341392998917 0.12608833413355386 ['ENSG00000171867|ENST00000379440|PRNP'] 42825 15778 IEQEGYWLP True H1975_Epitope_Rep1 1133.53932537101 1133.5387749679298 65.997 1 -0.03175397415056941 0.014074341392998917 0.12609592530199112 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 110784 13272 TGIQPGTSL True PC9_epitope_Rep1 872.46034677432 872.45924993586 55.915 2 -0.031757987571302576 0.014074341392998917 0.12610374193465765 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66611269-66612734:+|nuORF'] 7764 5270 ASREEILAQAK True PC9_epitope_Rep2 1214.66190011518 1214.66026490379 25.658 3 -0.03176092433526283 0.014074341392998917 0.12610946185635452 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 68975 13697 LTPKLFHEV True PC9_epitope_Rep1 1082.6124307416198 1082.61132993586 57.537 2 -0.03179743796441714 0.014092877154257577 0.1261805941827624 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 128050 8444 VPKNSDPWAA True PC9_epitope_Rep4 1083.53490869691 1083.53380993586 39.944 2 -0.03180328619996078 0.014092877154257577 0.12619198971291434 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 34748 5871 GQFDHGSGSL True NCI_RA007_Epitope_Rep3 1003.4359229316299 1003.43482993586 30.072 2 -0.03181337497672963 0.014092877154257577 0.12621164977704474 ['THRAP3|p.T757Rfs*5|1|0.18|ENSG00000054118|chr1:36296736-36296737|AC/-|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 55362 13539 LAELTGIK True PC9_epitope_Rep1 843.5065686907499 843.50546993586 56.934 2 -0.03183865935908803 0.014092877154257577 0.12626093086672957 ['ENSG00000123066|ENST00000281928|MED13L'] 1585 11446 AEEYGGVMV True H1975_Epitope_Rep2 953.4164333570099 953.41532993586 49.08 2 -0.03184338294671974 0.014092877154257577 0.12627013894682707 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000479169.5_1_2:242177863-242181895:-|nuORF'] 57327 8110 LEAEEWCK True H1975_Epitope_Rep1 1006.4429824580199 1006.44188993586 36.14 2 -0.03187404656422776 0.014092877154257577 0.12632992529762638 ['ENSG00000206052|ENST00000382713|DOK6', 'DOK6|p.C108S|1|0.19|ENSG00000206052|chr18:69677766-69677766|T/A|missense_variant'] 2678 7504 AESPGVPVA True NCI_RA007_Epitope_Rep4 825.4232329896099 825.4226849679301 35.509 1 -0.0318853639032764 0.014092877154257577 0.12635199618055887 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 8999 13645 AVGPIVQL True H1975_Epitope_Rep1 795.48543932335 795.48489496793 57.618 1 -0.031886812581750516 0.014092877154257577 0.1263548215601039 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.D74Y|1|0.21|ENSG00000112531|chr6:163455356-163455356|G/T|missense_variant'] 127417 18769 VNEVAILSL True PC9_epitope_Rep6 956.5542471591599 956.55369496793 84.834 1 -0.03188959196893624 0.014092877154257577 0.12636024236255267 ['ENST00000455385.6_1_7:105731299-105731344:-|nuORF'] 91011 6260 RFEEKHAYF True PC9_epitope_Rep6 1225.5880068989297 1225.58635490379 32.582 3 -0.03189864194196473 0.01410841200806195 0.12637789416523765 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 5677 14193 APAGGFQNIA True PC9_epitope_Rep5 944.4715801643599 944.47048993586 59.6 2 -0.03190718310179252 0.01410841200806195 0.12639455509170944 ['ENSG00000037897|ENST00000324871|METTL1'] 87553 20697 QQLEGAFAL True PC9_epitope_Rep5 975.5025459394698 975.50199496793 84.667 1 -0.03192063943585471 0.01410841200806195 0.12642080693024607 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 115135 9506 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 46.824 2 -0.03192542855988278 0.01410841200806195 0.1264301508923505 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 53062 8887 KPNSVVISC True PC9_epitope_Rep5 945.49535238405 945.49424993586 39.127 2 -0.03194651441625555 0.01410841200806195 0.12647129672101795 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF'] 129374 13163 VRDPRVLIL True PC9_epitope_Rep6 1079.68151336095 1079.68040993586 62.275 2 -0.03194945840605592 0.01410841200806195 0.12647704219947536 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.E632G|1|0.23|ENSG00000204267|chr6:32829437-32829437|T/C|missense_variant'] 2213 7150 AEMNGKLIAA True H1975_Epitope_Rep2 1016.5324661687598 1016.53136993586 32.437 2 -0.03196297704237873 0.01410841200806195 0.1265034274175261 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ENST00000494880.5_1_1:185268818-185270317:-|nuORF', 'ENST00000491112.1_1_1:185269520-185270317:-|nuORF'] 58910 11614 LETFLESAP True H1975_Epitope_Rep3 1005.5018772331299 1005.50078993586 49.805 2 -0.03196715172756218 0.01410841200806195 0.12651157619140854 ['nc|ENSG00000171044|Q5GH73-2|XKR6', 'XKR6|p.L584Sfs*19|1|0.21|ENSG00000171044|chr8:10898132-10898132|C/-|frameshift_variant', 'ENSG00000171044|ENST00000416569|XKR6'] 8778 17888 AVDLTLPKV True PC9_epitope_Rep4 954.57498260374 954.57388993586 76.845 2 -0.03197022578214563 0.01410841200806195 0.1265175768207077 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 115162 6582 TRDPAQRVVL True PC9_epitope_Rep4 1153.6567551650899 1153.65511490379 32.473 3 -0.03197281149846222 0.01410841200806195 0.1265226243532596 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 71363 18864 LYRLKFNEF True PC9_epitope_Rep5 1228.6604435632 1228.65934993586 77.577 2 -0.03198757649842715 0.01410841200806195 0.12655144950768246 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 24471 6874 FAEDGARTV True PC9_epitope_Rep5 964.4614094034799 964.46030993586 31.411 2 -0.03199655386392052 0.01410841200806195 0.12656897788636526 ['ENSG00000157240|ENST00000287934|FZD1'] 13217 7088 DLSKNFEVVA True NCI_RA007_Epitope_Rep3 1120.57643915572 1120.57534993586 34.996 2 -0.03200840522384622 0.01410841200806195 0.12659212031671174 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 4152 8889 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 39.135 2 -0.03201298177222126 0.01410841200806195 0.12660105782876263 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 137708 6049 YELGRPAA True NCI_RA007_Epitope_Rep5 875.4501164437899 875.44900993586 29.948 2 -0.032015420590311254 0.01410841200806195 0.12660582075805815 ['ENSG00000142937|ENST00000396651|RPS8', 'ENST00000470475.1_1_1:45241268-45242451:+|nuORF'] 99344 7626 SHSSVILKM True PC9_epitope_Rep2 1000.5375515492 1000.53644993586 34.705 2 -0.03201567552839793 0.01410841200806195 0.12660631865063066 ['ENSG00000129315|ENST00000261900|CCNT1'] 110388 8852 TEVLKTHGLLV True NCI_RA007_Epitope_Rep3 1208.71287305888 1208.71123490379 41.911 3 -0.03202128380888144 0.01410841200806195 0.1266172719294534 ['ENSG00000142541|ENST00000391857|RPL13A'] 2157 8849 AELQRLVAA True NCI_RA007_Epitope_Rep1 969.5607295219298 969.55962993586 38.421 2 -0.03203453014034958 0.01410841200806195 0.12664314532453022 ['ENSG00000150779|ENST00000504148|TIMM8B'] 43959 5706 IIEAEESR True H1975_Epitope_Rep3 945.47672511445 945.47562993586 26.978 2 -0.032043008609236354 0.01410841200806195 0.12665970779880073 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF'] 71401 21289 LYSQLVEAL True PC9_epitope_Rep2 1034.5648118428599 1034.56370993586 87.351 2 -0.03209510953665027 0.014126031348760261 0.1267615183050372 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 98244 14834 SEVEIAWPA True H1975_Epitope_Rep3 1000.4865615221598 1000.48597496793 62.441 1 -0.032100281288038435 0.014126031348760261 0.12677162749827028 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 22286 6316 ETDEQRLRDEY True H1975_Epitope_Rep1 1452.6481005258397 1452.64645490379 29.359 3 -0.0321809660267177 0.014126031348760261 0.12692941320216217 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 9454 17418 AVVGGVVAV True PC9_epitope_Rep2 769.4697892592098 769.4692449679301 72.257 1 -0.03221958603673641 0.014126031348760261 0.1270049855319166 ['ENSG00000165948|ENST00000555523|IFI27L1'] 141025 16939 YSLDHISSL True PC9_epitope_Rep2 1033.5080252427301 1033.5069299358602 70.397 2 -0.032227674318764256 0.014126031348760261 0.12702081673855417 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 79367 7847 PASGPIRPIVR True PC9_epitope_Rep3 1161.6982260542497 1161.6965849037902 35.171 3 -0.032228025607064455 0.014126031348760261 0.12702150434636772 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 100026 15126 SIQQSQNALL True PC9_epitope_Rep1 1100.5825871653199 1100.5814899358602 63.002 2 -0.03224323158253057 0.014126031348760261 0.12705127080279352 ['ENSG00000083097|ENST00000349129|DOP1A'] 6287 3996 APRGPGTVPA True PC9_epitope_Rep4 921.5032146458099 921.50210993586 21.604 2 -0.0322475892969807 0.014126031348760261 0.12705980212909107 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 34981 21387 GQSELTLLL True PC9_epitope_Rep4 972.54916177872 972.54861496793 90.433 1 -0.03225307169212068 0.014126031348760261 0.1270705358603287 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 98887 10077 SGVSLAALK True PC9_epitope_Rep6 844.50181766348 844.50072993586 49.358 2 -0.032260077414535175 0.014126031348760261 0.12708425295030223 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 107091 10171 SVHKGFAFV True PC9_epitope_Rep2 990.5287011176598 990.52815496793 44.46 1 -0.03226727301518093 0.014126031348760261 0.12709834287673036 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 65441 13219 LRHPNIVSL True PC9_epitope_Rep1 1047.61891310439 1047.6178099358601 55.71 2 -0.03226771509685229 0.014126031348760261 0.12709920856537502 ['ENSG00000170312|ENST00000395284|CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'CDK1|p.E57V|1|0.26|ENSG00000170312|chr10:60784837-60784837|A/T|missense_variant'] 97978 7076 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.41776993586 32.185 2 -0.03228761171329076 0.014146641498229019 0.12713817450376583 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 47119 16498 ITVEKIIKI True PC9_epitope_Rep3 1055.69543208959 1055.6943299358602 68.596 2 -0.03229515012731039 0.014146641498229019 0.12715294002849165 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 127991 8444 VPHQPFSQA True PC9_epitope_Rep5 1009.4981292653698 1009.49702993586 37.423 2 -0.032337244485250764 0.014166648993701356 0.12723541206569333 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 13375 14313 DLYANTVL True H1975_Epitope_Rep3 907.46509780159 907.46400993586 60.401 2 -0.03234421503448626 0.014166648993701356 0.1272490724348835 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 64673 21510 LPVLIPVAS True PC9_epitope_Rep1 907.5742543277499 907.57314993586 87.573 2 -0.032358983137669974 0.014166648993701356 0.1272780172006464 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 71399 19125 LYSPLAEQF True PC9_epitope_Rep6 1066.5335117145798 1066.5324099358602 86.214 2 -0.032408265377960335 0.014166648993701356 0.12737464068907245 ['ENSG00000103148|ENST00000611875|NPRL3'] 49134 9113 KEKSIFLVA True NCI_RA007_Epitope_Rep4 1033.6171817688898 1033.6160899358601 41.892 2 -0.03246041358574538 0.014187254798006574 0.12747693801597348 ['ENSG00000118363|ENST00000263672|SPCS2'] 14920 16907 DYDSVFHHL True PC9_epitope_Rep1 1131.4985231881901 1131.49687490379 69.857 3 -0.03249906326328431 0.014187254798006574 0.12755279209313683 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'EPC1|p.S472L|1|0.26|ENSG00000120616|chr10:32285027-32285027|G/A|missense_variant', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 65905 7267 LSDPQVHTV True PC9_epitope_Rep2 994.5083595959 994.50726993586 33.34 2 -0.03253861265856251 0.014228461163298628 0.1276304439974514 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 96921 12732 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 53.848 2 -0.032552934713757045 0.014228461163298628 0.12765857213833107 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 87243 19796 QPLPVILHV True PC9_epitope_Rep2 1014.6226015025001 1014.62150993586 81.535 2 -0.032558571840454506 0.014228461163298628 0.12766964447294057 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 25445 16048 FEEDGLGVLP True H1975_Epitope_Rep2 1074.5233409536997 1074.5222499358601 66.929 2 -0.0325585806517326 0.014228461163298628 0.12766966178039693 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 97631 9506 SEFGKIYGP True NCI_RA007_Epitope_Rep5 996.4916469025998 996.49054993586 43.197 2 -0.032589853864827004 0.014248155372741923 0.1277310999814784 ['ENSG00000082781|ENST00000296181|ITGB5'] 87417 16013 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.4631649679301 66.406 1 -0.0325975502693169 0.014248155372741923 0.12774622316119952 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 2010 6431 AEITNIRP True H1975_Epitope_Rep2 912.5028802926399 912.50178993586 29.658 2 -0.03262295467787262 0.014248155372741923 0.12779615069434463 ['ENSG00000132718|ENST00000368324|SYT11'] 2294 12065 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.5118349679301 51.49 1 -0.032623295234505904 0.014248155372741923 0.12779682008447482 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 107225 17620 SVISVVSYL True H1975_Epitope_Rep3 965.5433481222899 965.54279496793 73.615 1 -0.032650659386233974 0.014248155372741923 0.12785061427431316 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3', 'ENST00000543123.1_1_11:63449027-63517671:+|nuORF', 'nc|ENSG00000133318|O95197-6|RTN3', 'nc|ENSG00000133318|O95197-5|RTN3'] 100428 13160 SLAEGSVTSV True PC9_epitope_Rep5 948.47639076128 948.47528993586 55.625 2 -0.032764406825382814 0.014269055443655252 0.12807439255049088 ['ENSG00000079246|ENST00000392132|XRCC5'] 35116 6580 GQVTEAVKV True PC9_epitope_Rep6 929.5181960036099 929.51708993586 34.014 2 -0.032778542715332176 0.014289954628333969 0.12810222118636783 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 98957 7772 SHAQTVVL True PC9_epitope_Rep1 853.46576650793 853.46521496793 34.716 1 -0.03284489621313163 0.014308729384830627 0.1282329034308699 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 137970 21991 YFLKGVLVF True PC9_epitope_Rep1 1084.6321035570397 1084.6310099358602 89.409 2 -0.03285125087571468 0.014308729384830627 0.12824542363513097 ['ENSG00000031698|ENST00000234677|SARS1'] 67851 20163 LTAPALALA True PC9_epitope_Rep2 839.5116540711899 839.51054993586 82.969 2 -0.03285191626020406 0.014308729384830627 0.12824673465004283 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 70196 21256 LVQDLLTQV True PC9_epitope_Rep5 1027.5913609438699 1027.59026993586 86.813 2 -0.03285834078199799 0.014308729384830627 0.12825939343331014 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66099749-66102792:-|nuORF'] 120601 17291 VEHLTVPL True PC9_epitope_Rep5 906.5174677276199 906.51636993586 71.515 2 -0.032890589926380116 0.014308729384830627 0.12832294960178312 ['ENST00000503518.2_1_4:2967477-2967627:+|nuORF'] 101494 19013 SLLDKIIGA True PC9_epitope_Rep6 928.5593325396 928.55822993586 85.777 2 -0.032929463416185675 0.014308729384830627 0.12839958960047293 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 114240 17764 TPMPPISSV True PC9_epitope_Rep5 927.47355431031 927.47244993586 73.347 2 -0.032945416039462765 0.014308729384830627 0.12843104963961038 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 129484 25796 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 109.27 2 -0.03295439503141082 0.014308729384830627 0.12844875935782551 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 132500 12634 VVDLLAPYAK True NCI_RA007_Epitope_Rep2 1087.62774645259 1087.62664993586 53.756 2 -0.03298415833618473 0.014325979613029012 0.12850747497887913 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 102880 5303 SPAHAVDAV True PC9_epitope_Rep1 865.4293809992099 865.42828993586 25.239 2 -0.03300092365955412 0.014325979613029012 0.1285405568933557 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 89961 4984 RDFEGKVV True NCI_RA007_Epitope_Rep4 948.5028802926398 948.50178993586 25.648 2 -0.033007779535555434 0.014325979613029012 0.12855408682358327 ['ENSG00000066379|ENST00000332435|POLR1H'] 108093 11792 SYASLQQNKW True PC9_epitope_Rep4 1223.59348620219 1223.5923899358602 53.127 2 -0.03301581200583746 0.014325979613029012 0.12856993997845423 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 77827 14419 NVDGHLYEL True PC9_epitope_Rep4 1058.5032742154601 1058.5021699358601 63.371 2 -0.03308837019793812 0.014325979613029012 0.1287132039158049 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1', 'ENST00000510566.1_1_4:41263775-41266241:+|nuORF'] 7792 11846 ASSYIAHL True PC9_epitope_Rep5 860.4392174069199 860.43812993586 50.564 2 -0.033090915828200604 0.014325979613029012 0.12871823216776648 ['ENSG00000125878|ENST00000246080|TCF15', 'TCF23|p.A122S|1|0.42|ENSG00000163792|chr2:27150264-27150264|G/T|missense_variant', 'ENSG00000118526|ENST00000367882|TCF21', 'ENSG00000178860|ENST00000325509|MSC'] 133907 21270 VYIDQTMVL True PC9_epitope_Rep3 1080.5525329069999 1080.5514299358601 87.108 2 -0.033115942606792584 0.014325979613029012 0.12876767342717252 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 78346 13710 NYKDLNGNVF True PC9_epitope_Rep4 1182.5669371011797 1182.5658499358601 60.624 2 -0.0331537848885687 0.014325979613029012 0.12884245682717455 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 114302 13918 TPQEKIFIAA True PC9_epitope_Rep2 1116.6179100448799 1116.6168099358601 58.814 2 -0.033195252993814546 0.014325979613029012 0.1289244396420605 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7', 'ENST00000505692.1_1_4:122780107-122782831:-|nuORF', 'ENST00000502444.1_1_4:122782546-122791468:-|nuORF'] 67558 22198 LSTRLTLLL True PC9_epitope_Rep1 1028.65938093404 1028.65828993586 90.204 2 -0.0332088136231546 0.014325979613029012 0.12895125686786038 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 4127 11428 AHSPLAAQL True PC9_epitope_Rep3 906.4923156089401 906.49120993586 48.957 2 -0.03321429201213927 0.014325979613029012 0.12896209190084987 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 29324 16384 FVDEPLIHATT True PC9_epitope_Rep1 1241.6292030045697 1241.62810993586 67.843 2 -0.0332501912455204 0.014325979613029012 0.12903310799615403 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 131944 8212 VTRVESLSP True NCI_RA007_Epitope_Rep4 986.53965972418 986.53856993586 38.375 2 -0.033251892952869316 0.014325979613029012 0.12903647498839185 ['nc|ENSG00000113073|Q96Q91-4|SLC4A9', 'nc|ENSG00000113073|Q96Q91-2|SLC4A9', 'ENSG00000113073|ENST00000506757|SLC4A9', 'nc|ENSG00000113073|Q96Q91|SLC4A9'] 1619 15752 AEFLKVFLP True NCI_RA007_Epitope_Rep3 1062.6113681124598 1062.61026993586 69.598 2 -0.03329682515341144 0.014341701090986125 0.12912539942187162 ['ENSG00000176171|ENST00000368636|BNIP3'] 140155 15974 YQSELELRV True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 66.697 2 -0.03329906658975261 0.014341701090986125 0.1291298365013811 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E922Sfs*10|1|0.13|ENSG00000048707|chr1:12276351-12276351|G/-|frameshift_variant', 'VPS13D|p.E671K|1|0.1|ENSG00000048707|chr1:12271032-12271032|G/A|missense_variant'] 138431 16061 YHISLEHEIL True PC9_epitope_Rep4 1252.64518742188 1252.6435349037902 69.713 3 -0.033312909753972136 0.014341701090986125 0.1291572423202103 ['ENSG00000168002|ENST00000301788|POLR2G'] 1858 12102 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.48512993586 51.634 2 -0.033340427968394 0.014341701090986125 0.1292117329454597 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 141652 13692 YTSPVNPAV True PC9_epitope_Rep5 946.47599683846 946.47488993586 57.693 2 -0.03335963373538358 0.014341701090986125 0.12924977285797226 ['ENSG00000134825|ENST00000537328|TMEM258'] 37118 14759 GVPTKVFNV True PC9_epitope_Rep5 959.5440168286299 959.54290993586 61.77 2 -0.03338273232706903 0.014341701090986125 0.1292955332350451 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 1611 6258 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.38646993586 29.026 2 -0.03338494603620425 0.014341701090986125 0.12929991937236698 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 125325 7445 VIPELNGK True PC9_epitope_Rep6 868.50181766348 868.50072993586 37.871 2 -0.03340835671780435 0.014341701090986125 0.12934631040120187 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 76534 17392 NQIPTVNNL True PC9_epitope_Rep3 1011.5349086969101 1011.53380993586 72.068 2 -0.033414842769370776 0.014341701090986125 0.1293591652901695 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 39156 6462 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.54013490379 33.496 3 -0.03344323181948381 0.014341701090986125 0.1294154406255014 ['ENSG00000156482|ENST00000287038|RPL30'] 28446 4538 FSDHHENKYL True H1975_Epitope_Rep2 1288.58364979448 1288.5820049037902 22.565 3 -0.033468828439655214 0.014341701090986125 0.12946619489488181 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 65071 14654 LQLERISV True PC9_epitope_Rep5 956.5654805492 956.56438993586 61.369 2 -0.03348234655265166 0.014341701090986125 0.12949300477863304 ['ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF'] 17402 15701 EHDPQYAVIL True PC9_epitope_Rep6 1183.5873381925899 1183.58624993586 72.607 2 -0.03350608772570679 0.014341701090986125 0.12954009879209677 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 31718 5298 GEGPPANPP True H1975_Epitope_Rep3 834.38718183406 834.38608993586 25.458 2 -0.033519634296795955 0.014341701090986125 0.1295669755966144 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 108776 11168 SYSSTFHSL True PC9_epitope_Rep4 1027.46107505031 1027.45996993586 50.736 2 -0.033523170664015764 0.014341701090986125 0.12957399248257503 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 2819 7490 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.37346993586 33.76 2 -0.033531458270405635 0.014341701090986125 0.1295904378294941 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 111388 10165 THSELTVTV True PC9_epitope_Rep4 985.50802524273 985.50692993586 46.776 2 -0.033550779651179474 0.014341701090986125 0.12962878336409436 ['ENSG00000130702|ENST00000252999|LAMA5'] 53797 10788 KTDHFIFTY True H1975_Epitope_Rep2 1170.57095985246 1170.5693249037902 46.524 3 -0.0335557775865388 0.014341701090986125 0.12963870361160842 ['ENSG00000116212|ENST00000371370|LRRC42'] 67715 19450 LSWRLCFNQVL True PC9_epitope_Rep3 1377.72272654993 1377.7216299358602 80.04 2 -0.03356443367844046 0.01436227678098587 0.1296558860478641 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 8979 14127 AVGKIFSNV True PC9_epitope_Rep3 933.52836676449 933.52726993586 59.425 2 -0.03356910921808 0.01436227678098587 0.12966516769175027 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 27348 17213 FLSQPILL True H1975_Epitope_Rep1 929.5586042636099 929.55750993586 71.671 2 -0.03359661600476907 0.014382546070747723 0.12971978195704392 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 26983 9959 FLEGVGIR True H1975_Epitope_Rep1 889.5021520166499 889.50104993586 43.245 2 -0.033601942459645616 0.014382546070747723 0.1297303593596018 ['ENSG00000101331|ENST00000452892|CCM2L'] 58973 7087 LEVAKSLSA True H1975_Epitope_Rep3 916.5229470308799 916.52184993586 32.228 2 -0.03360737703260682 0.014382546070747723 0.12974115207274978 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 5222 21094 ALPEDLVEV True PC9_epitope_Rep5 983.5175272972699 983.51642993586 86.201 2 -0.03365413950517084 0.014424604435407003 0.1298340446817327 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 128684 8323 VPVSLKEA True PC9_epitope_Rep1 841.49091862661 841.48982993586 36.848 2 -0.033694750456207026 0.01444425618434429 0.12991475426896007 ['ENSG00000115306|ENST00000356805|SPTBN1'] 49050 6765 KEGMNIVEA True H1975_Epitope_Rep3 989.4851816231699 989.48408993586 30.976 2 -0.03371078484401539 0.01444425618434429 0.129946630198125 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000454070.2_1_1:101736433-101736811:-|nuORF', 'ENST00000449839.1_1_19:12618945-12619074:+|nuORF', 'ENST00000585753.1_1_19:30412142-30412556:+|nuORF', 'ENST00000440938.1_1_2:174350595-174351021:-|nuORF', 'ENST00000420099.1_1_13:91924337-91924628:-|nuORF', 'ENST00000435399.1_1_1:45880815-45881013:+|nuORF', 'ENST00000418508.1_1_2:130254157-130254292:+|nuORF', 'ENST00000567565.3_1_15:76039466-76039598:+|nuORF', 'ENST00000562009.1_1_15:74654250-74654382:+|nuORF', 'ENST00000567559.1_1_16:77926680-77926809:+|nuORF', 'ENST00000550612.1_1_12:31014923-31015109:+|nuORF'] 75104 12029 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56087496793 51.586 1 -0.03371772373544916 0.01444425618434429 0.12996042618175252 ['ENSG00000171223|ENST00000302754|JUNB'] 91610 19111 RIMGNIWDA True PC9_epitope_Rep3 1074.5280494946599 1074.52694993586 78.734 2 -0.0337283627571203 0.01444425618434429 0.12998158074864327 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 111419 17798 THSMDLVAL True PC9_epitope_Rep3 985.4902670036099 985.48916993586 73.659 2 -0.03373762129607848 0.01444425618434429 0.1299999922848957 ['nc|ENSG00000254536|Q6QHF9-5|PAOX', 'nc|ENSG00000254536|Q6QHF9-4|PAOX', 'ENST00000368535.2_1_10:135193041-135204956:+|nuORF', 'ENSG00000148832|ENST00000278060|PAOX'] 93187 8792 RPPLNPVSA True PC9_epitope_Rep1 949.53451477409 949.53340993586 38.659 2 -0.033747064321445114 0.014455026455026455 0.1300187725247268 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1'] 93533 17554 RQLESLIRL True PC9_epitope_Rep3 1126.6822416369398 1126.68058490379 72.707 3 -0.033753888518640696 0.014455026455026455 0.13003234560543359 ['ENSG00000104738|ENST00000649973|MCM4', 'nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 75023 12649 NHSDYNMVL True PC9_epitope_Rep4 1091.47059418819 1091.46948993586 56.494 2 -0.033761891408798414 0.014455026455026455 0.13004826429588628 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 41752 5802 IAPALVSK True NCI_RA007_Epitope_Rep1 797.5010893874901 797.49998993586 26.621 2 -0.03377768378177422 0.014455026455026455 0.13007968108681048 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 27358 17312 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55750993586 72.243 2 -0.03378044851069822 0.014455026455026455 0.13008518167400854 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 114837 13898 TQMNAELNYKV True PC9_epitope_Rep5 1309.6336367620102 1309.63252993586 58.478 2 -0.03380829498423834 0.014455026455026455 0.13014059268699096 ['ENSG00000139433|ENST00000318348|GLTP'] 138755 10735 YISPDQLA True H1975_Epitope_Rep1 905.44944773745 905.4488949679301 46.254 1 -0.033810547797587284 0.014455026455026455 0.13014507620908825 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 5736 21464 APAPVFFVT True PC9_epitope_Rep5 947.5116540711899 947.51054993586 87.6 2 -0.033823390468375646 0.014455026455026455 0.13017063755182764 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'ABCC3|p.E507Sfs*5|1|0.28|ENSG00000108846|chr17:50667639-50667639|G/-|frameshift_variant', 'nc|ENSG00000108846|O15438-3|ABCC3'] 76531 23370 NQIPGLIWI True PC9_epitope_Rep2 1052.60186605792 1052.6007699358602 95.367 2 -0.03385271386359515 0.014455026455026455 0.13022901406013487 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 127547 9307 VNRQAVAL True PC9_epitope_Rep5 869.5083000262498 869.50720993586 40.752 2 -0.03385418149212647 0.014455026455026455 0.13023193625899962 ['nc|ENSG00000198788|Q02817|MUC2'] 782 11948 AAVTSLFAK True PC9_epitope_Rep6 906.5174677276199 906.51636993586 57.208 2 -0.03390884384087516 0.014455026455026455 0.1303408064684109 ['CON__Q3SX09'] 92759 9723 RPAAPLIGA True PC9_epitope_Rep2 864.51813643396 864.51702993586 42.74 2 -0.033909978579935045 0.014455026455026455 0.13034306716946187 ['ENSG00000111276|ENST00000228872|CDKN1B'] 138562 14378 YIDDVFHAL True NCI_RA007_Epitope_Rep3 1091.52876068731 1091.52766993586 63.87 2 -0.03391248004564262 0.014455026455026455 0.13034805084682913 ['nc|ENSG00000143622|Q92963-2|RIT1', 'ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1'] 109624 8125 TEAGFPEQA True H1975_Epitope_Rep2 948.4188758851598 948.4183249679301 36.203 1 -0.03392540247777174 0.014455026455026455 0.13037379831621188 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 129107 14594 VQQEVLQL True NCI_RA007_Epitope_Rep5 955.5338460677499 955.53274993586 62.805 2 -0.033927921713823625 0.014455026455026455 0.13037881820523295 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 131015 18381 VTDQDFYSL True PC9_epitope_Rep1 1086.48695544498 1086.4858499358602 75.493 2 -0.03393561551075136 0.014455026455026455 0.13039414986226008 ['DNAJC10|p.G31V|1|0.12|ENSG00000077232|chr2:182718178-182718178|G/T|missense_variant'] 12615 15179 DLAGSIIGK True PC9_epitope_Rep5 872.4967322830399 872.49562993586 63.394 2 -0.0339400932312539 0.014455026455026455 0.13040307331470602 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 95867 13607 RYKPGEPITF True PC9_epitope_Rep5 1206.6397081186199 1206.6386099358601 57.362 2 -0.0339609448436691 0.014455026455026455 0.13044463306370765 ['ENSG00000213047|ENST00000620048|DENND1B', 'nc|ENSG00000213047|Q6P3S1-4|DENND1B', 'nc|ENSG00000213047|Q6P3S1-2|DENND1B', 'nc|ENSG00000213047|Q6P3S1-5|DENND1B'] 115665 13883 TRYIAPTVL True PC9_epitope_Rep4 1032.5967806774797 1032.59568993586 61.301 2 -0.0339846256883267 0.014455026455026455 0.13049184276563236 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 443 17869 AALPNVYEV True PC9_epitope_Rep6 974.5072969667399 974.5067449679301 81.361 1 -0.033984741720419265 0.014455026455026455 0.13049207411379207 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 39248 17047 HIIGGVIAV True PC9_epitope_Rep2 877.53853752537 877.53744993586 70.824 2 -0.03400710970687638 0.014455026455026455 0.13053667728070154 ['ENST00000550528.5_1_12:58133675-58140075:+|nuORF', 'ENST00000546993.5_1_12:58138937-58140584:+|nuORF', 'ENSG00000135452|ENST00000257910|TSPAN31'] 40307 18553 HQPTTWVSF True PC9_epitope_Rep3 1101.52434401321 1101.5232499358601 76.583 2 -0.03400737633679483 0.014455026455026455 0.13053720902017302 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 45736 9121 IRYPDSHQL True PC9_epitope_Rep1 1127.57235683479 1127.57071490379 39.935 3 -0.03403988959415777 0.014455026455026455 0.13060206121289106 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 39203 11307 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45884993586 51.27 2 -0.034064541167060265 0.014455026455026455 0.13065124683011936 ['ENSG00000132646|ENST00000379143|PCNA'] 40883 20078 HSFTEFMGV True PC9_epitope_Rep3 1053.45896687533 1053.4578699358601 82.481 2 -0.0340908405703595 0.014455026455026455 0.13070373417600323 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 126662 7666 VLNTNIDGR True PC9_epitope_Rep5 1000.53015766964 1000.52906993586 34.431 2 -0.03411536844271422 0.014455026455026455 0.13075269892328475 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 64650 8486 LPTTNSGVSA True PC9_epitope_Rep2 945.47672511445 945.47562993586 38.007 2 -0.03412884639498193 0.014455026455026455 0.13077961014849107 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 116188 11483 TSVPPGSAL True PC9_epitope_Rep5 827.4388830537499 827.43778993586 49.167 2 -0.03413431749392869 0.014455026455026455 0.13079053528714538 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.G1446W|1|0.48|ENSG00000181555|chr3:47120300-47120300|C/A|missense_variant'] 96970 19979 SAYEFVTWL True H1975_Epitope_Rep3 1114.5335117145798 1114.5324099358602 83.61 2 -0.034145318458026236 0.014455026455026455 0.1308125047968888 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'ENST00000593636.1_1_19:50321571-50322554:+|nuORF'] 26464 7026 FIDRPSTY True H1975_Epitope_Rep1 997.48689587533 997.48578993586 32.06 2 -0.0341604479525346 0.014455026455026455 0.13084272330998142 ['nc|ENSG00000151364|Q9BQ13-2|KCTD14', 'ENSG00000151364|ENST00000353172|KCTD14'] 77740 4368 NTNPNFVR True PC9_epitope_Rep6 960.4777281739599 960.47662993586 23.893 2 -0.03417720116683982 0.014455026455026455 0.1308761904702072 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 133717 18345 VYDPATETW True PC9_epitope_Rep4 1080.4763907612798 1080.47528993586 78.631 2 -0.034184589757011705 0.014455026455026455 0.13089095218615437 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 104961 14431 SRDGMNIVL True PC9_epitope_Rep4 1003.5120650773499 1003.5114749679301 63.417 1 -0.034185654089308785 0.014455026455026455 0.13089307871660005 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 49266 7911 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 35.377 2 -0.03419831747323073 0.014455026455026455 0.13091838189930907 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 104014 16324 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42922496793 67.786 1 -0.03427818265493548 0.01447465876626812 0.13107804033092352 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 26086 12114 FGPALSVK True PC9_epitope_Rep3 817.46978925921 817.46868993586 51.64 2 -0.03428237010629473 0.01447465876626812 0.13108641512096322 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 70778 8880 LYAEKPPRCSC True H1975_Epitope_Rep3 1265.58966377505 1265.58856993586 39.157 2 -0.03428524989638669 0.01447465876626812 0.13109217483523666 ['ENST00000493450.1_1_20:37659368-37662889:+|nuORF'] 31605 8323 GEESPLETAA True H1975_Epitope_Rep2 1002.45056993626 1002.44946993586 36.964 2 -0.03429455665756553 0.01447465876626812 0.13111078997003575 ['ENSG00000111817|ENST00000644252|DSE'] 133488 22195 VWFPDMMPTW True NCI_RA007_Epitope_Rep1 1308.5671374253197 1308.5660299358601 90.916 2 -0.03430792117979131 0.01447465876626812 0.13113752447993546 ['ENSG00000005812|ENST00000355619|FBXL3'] 119631 9618 VATVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 41.96 2 -0.03431908930790877 0.014511761719411069 0.13115986815187974 ['CON__P00761'] 49276 8468 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 37.524 2 -0.03434498852644237 0.014511761719411069 0.13121169376737526 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 97313 9294 SEAPESVVV True H1975_Epitope_Rep2 915.45492704071 915.4543749679301 40.708 1 -0.03436348818913211 0.014511761719411069 0.13124872104611937 ['nc|ENSG00000205189|Q96DT7-4|ZBTB10', 'nc|ENSG00000205189|Q96DT7-3|ZBTB10', 'nc|ENSG00000205189|Q96DT7-2|ZBTB10', 'ENSG00000205189|ENST00000455036|ZBTB10'] 139678 13424 YNELTEILVR True H1975_Epitope_Rep3 1248.6714021697198 1248.6703099358601 56.906 2 -0.034389888121619215 0.014511761719411069 0.13130157312693036 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 79026 11267 PALGEAALA True H1975_Epitope_Rep2 811.4439684341899 811.44341496793 48.383 1 -0.034399920460936886 0.014511761719411069 0.131321661448859 ['ENSG00000167378|ENST00000422989|IRGQ'] 90291 2759 REERPPTLSA True H1975_Epitope_Rep2 1154.6043852390599 1154.6027249037902 14.64 3 -0.03441551158572012 0.014511761719411069 0.13135288459637087 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 90378 7133 REHPLWQAA True NCI_RA007_Epitope_Rep4 1106.5621265042598 1106.56102993586 34.056 2 -0.03443803739558906 0.014511761719411069 0.1313980042334842 ['ENSG00000198113|ENST00000357503|TOR4A'] 103088 21260 SPGTALILLEA True PC9_epitope_Rep4 1083.61757569171 1083.61646993586 89.946 2 -0.03446636870290638 0.014511761719411069 0.13145476737933853 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 41701 12581 IAIDNLEKA True PC9_epitope_Rep2 985.54441075145 985.54330993586 53.699 2 -0.03448015822534624 0.014511761719411069 0.13148240139567335 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-1|BNIP1'] 73494 21123 MVDGTLLLL True PC9_epitope_Rep6 973.5518046310099 973.55125496793 94.09 1 -0.03448326750883489 0.014511761719411069 0.13148863290416107 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 98924 16914 SHADVVNLL True PC9_epitope_Rep5 966.51344497634 966.51289496793 70.075 1 -0.03451570733264464 0.014511761719411069 0.1315536595673221 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 25587 11034 FELFADKVPK True NCI_RA007_Epitope_Rep2 1192.6492101731599 1192.64810993586 47.52 2 -0.03452271521036997 0.014511761719411069 0.131567709957358 ['ENSG00000196262|ENST00000468812|PPIA'] 98133 10080 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 43.765 2 -0.034534168219399364 0.014511761719411069 0.1315906747780461 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 95800 16999 RYILLPVVL True NCI_RA007_Epitope_Rep5 1084.7008518231999 1084.6997499358602 72.147 2 -0.0345490784367554 0.014511761719411069 0.13162057585418166 ['DOCK4|p.L1501*|1|0.32|ENSG00000128512|chr7:111747332-111747332|G/-|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 130893 18129 VTDDLVCLVY True H1975_Epitope_Rep2 1138.55801221026 1138.5569099358602 75.137 2 -0.034602209736568114 0.014511761719411069 0.13172716341739368 ['ENSG00000143742|ENST00000304786|SRP9'] 142244 13395 YWQNHPEL True PC9_epitope_Rep5 1085.4930438849299 1085.49194993586 56.54 2 -0.03460307831301105 0.014511761719411069 0.13172890637060727 ['ENSG00000119203|ENST00000238112|CPSF3'] 81087 15530 PITPSPTV True PC9_epitope_Rep2 810.4487194614601 810.44762993586 65.009 2 -0.03462644348056942 0.014511761719411069 0.13177579862809777 ['ENST00000486360.1_1_1:203045208-203045709:+|nuORF'] 5734 21286 APAPVFFVT True PC9_epitope_Rep2 947.5116540711899 947.51054993586 87.34 2 -0.0346552900221533 0.01453137889459991 0.13183370728886823 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'ABCC3|p.E507Sfs*5|1|0.28|ENSG00000108846|chr17:50667639-50667639|G/-|frameshift_variant', 'nc|ENSG00000108846|O15438-3|ABCC3'] 46174 17514 ISLPLPNFSS True H1975_Epitope_Rep1 1073.57571087973 1073.57517496793 72.863 1 -0.03465987457757637 0.01453137889459991 0.13184291225583428 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 79278 7406 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 37.706 2 -0.03467563034368978 0.01453137889459991 0.13187455034928522 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 119864 7594 VDFNVPM[Oxidation]K True H1975_Epitope_Rep1 964.4688036634799 964.46770993586 34.203 2 -0.034700034143822785 0.01453137889459991 0.13192356417466136 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant', 'chrX:78105340-78109867|153|32.44|0.48|6.09|+|1|None,PGK1|1'] 26518 17381 FIFSDTHEL True PC9_epitope_Rep6 1107.52367530687 1107.52256993586 79.472 2 -0.034709222681764476 0.01453137889459991 0.13194202211019154 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 103736 18673 SPVLPLTSA True PC9_epitope_Rep1 883.50148331031 883.50038993586 76.615 2 -0.034728901946945376 0.014548837996151325 0.13198155973036296 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1'] 106406 3287 STIGPEGVHQK True NCI_RA007_Epitope_Rep3 1151.5934862021898 1151.5918349037902 18.351 3 -0.03475902128478876 0.014548837996151325 0.132042088112455 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 55543 8811 LAGPLRPAA True PC9_epitope_Rep3 864.5181364339599 864.51702993586 38.841 2 -0.034761885412062744 0.014548837996151325 0.13204784489899266 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 60372 8313 LGTDEISPR True PC9_epitope_Rep5 986.5032742154599 986.50216993586 36.914 2 -0.03477203032328431 0.014548837996151325 0.13206823715683977 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 128194 20103 VPMEIHFMEA True PC9_epitope_Rep1 1202.54640198074 1202.5453099358601 82.155 2 -0.034808628607041925 0.014548837996151325 0.13214182106817818 ['ENST00000472678.1_1_2:61258678-61258789:+|nuORF'] 2714 7187 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 32.578 2 -0.0348217670746792 0.014548837996151325 0.13216824385719741 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 109719 3146 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 16.575 2 -0.034890659588642965 0.014548837996151325 0.13230685249830812 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 77569 4614 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 22.85 2 -0.03492490311763379 0.014548837996151325 0.13237578570017147 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 128306 5728 VPPPPPIAR True NCI_RA007_Epitope_Rep3 942.56508662638 942.56398993586 29.508 2 -0.034938591580776016 0.014548837996151325 0.13240334779727655 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 93310 7824 RPRVTEPISA True PC9_epitope_Rep5 1124.6302060640799 1124.62855490379 35.039 3 -0.03494209327953506 0.014548837996151325 0.13241039919068018 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 9789 17001 AYIQVTHVI True PC9_epitope_Rep3 1042.58113061334 1042.58002993586 70.553 2 -0.034949024735085106 0.014548837996151325 0.1324243578603052 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9'] 133868 16892 VYGPMKNYL True PC9_epitope_Rep3 1083.5423025764699 1083.54120993586 70.13 2 -0.03495807246002223 0.014548837996151325 0.13244257981016425 ['ENSG00000166825|ENST00000300060|ANPEP'] 103666 6238 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 29.393 2 -0.034983089385278714 0.014566288239149279 0.1324929723043897 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 108647 7913 SYPRRFSTL True PC9_epitope_Rep6 1125.59309227937 1125.59143490379 39.865 3 -0.03498721833262366 0.014566288239149279 0.13250129064469254 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 71729 10645 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 45.97 2 -0.03499504415602151 0.014566288239149279 0.1325170578314285 ['ENSG00000026025|ENST00000544301|VIM'] 84226 12788 PYLGSAVSL True H1975_Epitope_Rep3 905.4858332461699 905.48472993586 54.405 2 -0.03500677971596188 0.014566288239149279 0.13254070460436698 ['ENSG00000253309|ENST00000681248|SERPINE3', 'nc|ENSG00000253309|A8MV23|SERPINE3'] 88627 11730 QTEEDYTLTM[Oxidation]Y True H1975_Epitope_Rep2 1408.5704277492 1408.5693299358602 50.192 2 -0.03503191544274714 0.014566288239149279 0.13259136192841636 ['nc|ENSG00000166206|P28472-3|GABRB3'] 63951 9355 LNSVVQSV True PC9_epitope_Rep1 844.4654321547599 844.46432993586 40.842 2 -0.0350366579744858 0.014566288239149279 0.13260092127208162 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 35977 19018 GTVEQIVYL True PC9_epitope_Rep6 1020.5491617787197 1020.54806993586 85.796 2 -0.03506281706325282 0.014566288239149279 0.1326536575846529 ['ENSG00000182481|ENST00000330459|KPNA2'] 76838 8320 NRAVVGVVA True PC9_epitope_Rep3 883.5239500903898 883.52284993586 36.975 2 -0.0350639210949061 0.014566288239149279 0.13265588360855116 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 27856 7197 FQDNHGVTV True PC9_epitope_Rep4 1015.4723084403499 1015.47120993586 34.986 2 -0.03508839414600844 0.014566288239149279 0.1327052343607226 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 1007 8208 AEAAVVAVA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 36.525 1 -0.03510636905857135 0.014566288239149279 0.13274148933737764 ['ENSG00000211450|ENST00000534355|SELENOH'] 5189 20963 ALMPVLNQV True PC9_epitope_Rep2 983.54738795691 983.54628993586 86.083 2 -0.03512706148954775 0.014566288239149279 0.13278323381689797 ['ENSG00000223496|ENST00000435634|EXOSC6'] 119182 10431 VAKGGLGLI True PC9_epitope_Rep6 826.5276384884999 826.52654993586 50.876 2 -0.03513054888932368 0.014566288239149279 0.13279027010274824 ['ENSG00000101843|ENST00000217958|PSMD10'] 5951 10549 APGYSYTAA True PC9_epitope_Rep1 899.4024975450299 899.40140993586 45.467 2 -0.03516050704163258 0.014587121051963976 0.13285072503373724 ['ENSG00000172115|ENST00000305786|CYCS'] 2928 5446 AEYRSYVA True H1975_Epitope_Rep2 957.45559574705 957.45448993586 25.975 2 -0.03519716646442101 0.014606717821886824 0.13292472842389091 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P1343Lfs*68|1|0.26|ENSG00000198753|chrX:153774974-153774974|C/-|frameshift_variant'] 77980 16439 NVPDSFNEV True PC9_epitope_Rep2 1019.45598966987 1019.4554749679301 68.474 1 -0.03522493842793711 0.014606717821886824 0.13298080957607147 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 128818 10325 VQASHFEGL True PC9_epitope_Rep4 986.4821448480599 986.48104993586 47.405 2 -0.03522654716273521 0.014606717821886824 0.13298405865758678 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 48209 19072 IYPVDLGDKF True PC9_epitope_Rep4 1165.6019256275697 1165.60082993586 81.451 2 -0.03523186580308215 0.014606717821886824 0.13299480083425663 ['nc|ENSG00000163882|P52434-3|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H', 'nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H'] 35807 12177 GTITDDVRV True PC9_epitope_Rep5 974.50327421546 974.50216993586 51.828 2 -0.03523850357061833 0.014606717821886824 0.13300820810822028 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 70548 17553 LVYQEPIPTA True PC9_epitope_Rep4 1129.60192562757 1129.60082993586 75.536 2 -0.03527173986091376 0.01462229265715795 0.1330753541294379 ['ENSG00000106588|ENST00000223321|PSMA2', 'ENST00000433579.1_1_7:42952135-42964395:-|nuORF', 'ENST00000411875.1_1_7:42961455-42966220:-|nuORF'] 26448 17374 FIDDANYSV True PC9_epitope_Rep4 1042.4607406971402 1042.46017496793 74.832 1 -0.03527810307906891 0.01462229265715795 0.13308821212338312 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 93203 5091 RPPPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 24.96 2 -0.03527894508027978 0.01462229265715795 0.13308991359712583 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 115628 9554 TRVNPVTL True PC9_epitope_Rep2 898.5236157372199 898.52250993586 42.095 2 -0.035288095157537405 0.01462229265715795 0.13310840456593398 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19', 'nc|ENSG00000278259|Q96H55-2|MYO19', 'nc|ENSG00000278259|Q96H55-3|MYO19'] 109301 12381 TAVTVNQSL True PC9_epitope_Rep1 931.4974605590301 931.49691496793 52.482 1 -0.03531854984104954 0.01462229265715795 0.1331699615950222 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 142815 15132 YYSPHGHILVL True PC9_epitope_Rep2 1297.68190728377 1297.68080993586 63.463 2 -0.035322845544649734 0.01462229265715795 0.1331786459115652 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 28814 15030 FSVTGRVL True PC9_epitope_Rep5 877.50215201665 877.50104993586 62.816 2 -0.035346801082352095 0.01462229265715795 0.13322708215835388 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 105602 11466 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45877496793 49.159 1 -0.035353431623975175 0.01462229265715795 0.13324049071417715 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 27510 20769 FMPPGLQEL True PC9_epitope_Rep4 1030.5157534754599 1030.51464993586 88.043 2 -0.03535786921311193 0.01462229265715795 0.1332494651023889 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 46569 11178 ITAIDQDKGR True NCI_RA007_Epitope_Rep1 1115.5934862021898 1115.5923899358602 47.479 2 -0.03537111338397569 0.01462229265715795 0.13327625198017093 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-6|CDH23', 'nc|ENSG00000107736|Q9H251-5|CDH23'] 38078 11968 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.4495649679301 51.031 1 -0.035410160671942754 0.01462229265715795 0.13335524799257872 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 69257 10815 LTTEVHPEL True PC9_epitope_Rep6 1037.5393253710097 1037.53822993586 52.448 2 -0.035411668148450995 0.01462229265715795 0.1333582983838331 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3', 'ERGIC3|p.Y48C|1|0.27|ENSG00000125991|chr20:35542377-35542377|A/G|missense_variant'] 104046 3576 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 19.852 2 -0.03541949895546733 0.01462229265715795 0.133374144848924 ['ENSG00000130935|ENST00000253247|NOL11'] 101240 17754 SLHQGLPVL True PC9_epitope_Rep4 962.5549158654999 962.55380993586 76.314 2 -0.0354502506199543 0.01462229265715795 0.13343638645302955 ['ENST00000529943.6_1_16:31724582-31724693:+|nuORF'] 132191 11444 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 50.668 2 -0.03552464643077019 0.01462229265715795 0.13358704565937962 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 114439 13990 TPVETVNIS True PC9_epitope_Rep1 958.49712620586 958.4965749679301 58.651 1 -0.03553842059290406 0.01462229265715795 0.13361495241794896 ['ENSG00000169676|ENST00000304374|DRD5'] 31808 10102 GEIGLGTPP True NCI_RA007_Epitope_Rep5 839.43888305375 839.43833496793 45.493 1 -0.0355434555609583 0.01462229265715795 0.1336251543621224 ['ENSG00000131400|ENST00000253719|NAPSA'] 102850 10881 SNWYTAETP True H1975_Epitope_Rep2 1067.45598966987 1067.4548899358601 46.882 2 -0.03560809305509022 0.01462229265715795 0.13375617097055675 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 71661 17111 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50884993586 71.249 2 -0.03563059977505656 0.01464218555219844 0.13380181128463656 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 116219 11892 TTATEALWHY True H1975_Epitope_Rep2 1191.5560380643099 1191.5549499358601 50.823 2 -0.03563130075924478 0.01464218555219844 0.13380323294693142 ['ENST00000216277.12_1_14:96968904-96986484:+|nuORF'] 79240 6705 PAPPPPPPP True NCI_RA007_Epitope_Rep2 865.46978925921 865.46868993586 30.693 2 -0.035642670292065685 0.01464218555219844 0.13382629286639033 ['BAG6|p.P688A|1|0.19|ENSG00000204463|chr6:31642295-31642295|G/C|missense_variant', 'ENSG00000095539|ENST00000210633|SEMA4G', 'nc|ENSG00000095539|Q9NTN9|SEMA4G', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000137460|ENST00000511601|FHDC1', 'RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 8279 22492 ATIFDLSEV True PC9_epitope_Rep3 993.5018772331299 993.50078993586 91.789 2 -0.03566644377784787 0.01464218555219844 0.13387451944666817 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 128492 16637 VPSPGLPVSA True PC9_epitope_Rep1 922.5123823471799 922.5118349679301 68.824 1 -0.03570917069064624 0.014658358855211743 0.13396122432015298 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 39958 11994 HPKYSDMIVA True PC9_epitope_Rep5 1159.56957995347 1159.56848993586 51.13 2 -0.035724971562258914 0.014658358855211743 0.13399329835562107 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 35908 11065 GTQPWFISK True NCI_RA007_Epitope_Rep5 1062.5498304850598 1062.5487299358601 49.196 2 -0.03572601734461569 0.014658358855211743 0.13399542136272707 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK'] 133738 9784 VYDTVFKHF True NCI_RA007_Epitope_Rep3 1154.5760452328998 1154.5744049037899 45.549 3 -0.035738425331135276 0.014658358855211743 0.13402061213355376 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 2292 11855 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.5118349679301 50.678 1 -0.03576114883502007 0.014658358855211743 0.1340667538547572 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 89064 8948 QVM[Oxidation]QGMGVSA True PC9_epitope_Rep5 1022.4525019763398 1022.4514099358599 39.361 2 -0.035777907883702616 0.014658358855211743 0.13410079121661847 ['ENSG00000169813|ENST00000682386|HNRNPF'] 137048 14692 YALYDATYETK True PC9_epitope_Rep3 1336.61869789052 1336.6176099358602 61.649 2 -0.035827811801873555 0.014658358855211743 0.1342021799706618 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 130237 20087 VSFGDFVQV True PC9_epitope_Rep6 996.4916469025999 996.49054993586 89.94 2 -0.03584645234137565 0.014658358855211743 0.13424006489110485 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 125286 18682 VILSLILHL True PC9_epitope_Rep6 1019.6743027221901 1019.67320993586 84.504 2 -0.0358504358498847 0.014658358855211743 0.1342481618896721 ['ENSG00000113249|ENST00000523175|HAVCR1'] 93101 7355 RPNPPPVSV True PC9_epitope_Rep4 961.53451477409 961.53340993586 35.625 2 -0.03586672430041663 0.014658358855211743 0.13428127372495854 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 115685 16231 TSAESFVNV True PC9_epitope_Rep4 952.45017601344 952.44962496793 70.374 1 -0.03591633026706281 0.014658358855211743 0.1343821488730714 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 24555 13305 FAGM[Oxidation]PITL True H1975_Epitope_Rep2 864.44152628648 864.4409749679301 56.307 1 -0.035963231702890675 0.014658358855211743 0.13447757148840972 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 127679 10398 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.4914349679301 44.936 1 -0.03597062051624482 0.014658358855211743 0.13449260847219266 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 133739 10251 VYDTVFKHF True NCI_RA007_Epitope_Rep4 1154.5760452328998 1154.5744049037899 46.285 3 -0.03601629782045608 0.014658358855211743 0.13458559169774184 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 26722 21052 FIWENIHTL True PC9_epitope_Rep5 1171.6025943339098 1171.6014899358602 86.036 2 -0.03603559863137347 0.014658358855211743 0.1346248945692494 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 5470 16632 ALVVQVAEA True PC9_epitope_Rep1 898.5123823471799 898.51128993586 68.803 2 -0.036042479326322104 0.014658358855211743 0.13463890783231144 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 44959 17923 IPAALPVAA True PC9_epitope_Rep5 821.50108938749 821.49998993586 73.958 2 -0.03606792484401986 0.014674211393099953 0.13469073890161856 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 67857 20319 LTAPALALA True PC9_epitope_Rep5 839.5116540711899 839.51054993586 83.194 2 -0.03606965511503125 0.014674211393099953 0.13469426385559882 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 58055 7460 LEIKPPPSA True H1975_Epitope_Rep2 950.54368247546 950.54258993586 33.642 2 -0.03614126493349191 0.014674211393099953 0.13484020406915273 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P1059Rfs*35|1|0.35|ENSG00000080603|chr16:30720897-30720897|C/-|frameshift_variant', 'SRCAP|p.Q1189Sfs*2|1|0.18|ENSG00000080603|chr16:30722142-30722142|G/-|frameshift_variant', 'SRCAP|p.A1596Sfs*250|1|0.25|ENSG00000080603|chr16:30724210-30724214|GCAAT/-|frameshift_variant'] 111595 12906 TIDDLEDKLK True PC9_epitope_Rep1 1188.62378327096 1188.6221249037899 54.515 3 -0.03616967808775016 0.014674211393099953 0.13489813949294596 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 139439 20408 YLPPGFLSA True PC9_epitope_Rep4 963.50656869075 963.50546993586 86.646 2 -0.03618483285091746 0.014674211393099953 0.1349290474790359 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 23734 19908 EYFSYPVSL True PC9_epitope_Rep6 1103.51752729727 1103.5169749679299 89.231 1 -0.03620109889456129 0.014674211393099953 0.13496222724353032 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 129046 7307 VQNGKVIGV True PC9_epitope_Rep3 912.5392658013598 912.53816993586 33.111 2 -0.036215530156935 0.014674211393099953 0.1349916690113611 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 53939 13003 KTSESSTILVV True PC9_epitope_Rep2 1162.64451871554 1162.64342993586 55.302 2 -0.03625290961831503 0.014674211393099953 0.13506794848365158 ['ENSG00000203926|ENST00000370518|SPANXA2', 'ENSG00000198573|ENST00000358993|SPANXC', 'ENSG00000198021|ENST00000370519|SPANXA1', 'ENSG00000196406|ENST00000370515|SPANXD', 'ENSG00000227234|ENST00000449283|SPANXB1'] 120373 3227 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 16.976 2 -0.03627044934782215 0.014674211393099953 0.13510375148940096 ['ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 131078 14448 VTDTGALYLY True H1975_Epitope_Rep2 1114.55464108198 1114.5540749679299 60.73 1 -0.03630044454305597 0.014674211393099953 0.13516499411840294 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 103103 13224 SPHGIIVIA True PC9_epitope_Rep4 905.5334521449299 905.53234993586 58.761 2 -0.03631749651066738 0.014674211393099953 0.13519981831159697 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 79445 6334 PAVFPAAR True NCI_RA007_Epitope_Rep3 827.4653725851099 827.46426993586 31.919 2 -0.0363392689702554 0.014674211393099953 0.1352442917002448 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 136968 6357 YAHPSGTAL True PC9_epitope_Rep2 915.4450310633499 915.44392993586 29.856 2 -0.036342160338886396 0.014674211393099953 0.13525019848197953 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'AFAP1|p.G490V|1|0.32|ENSG00000196526|chr4:7786255-7786255|C/A|missense_variant'] 78356 14827 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.60641490379 61.853 3 -0.036373225776778685 0.014674211393099953 0.13531367312692477 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 104323 7680 SQIQEFKEA True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 34.91 2 -0.03637382765890218 0.014674211393099953 0.135314903125185 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G72Afs*2|1|0.23|ENSG00000101335|chr20:36548060-36548060|G/-|frameshift_variant', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 7109 5030 AQVEPGEHV True PC9_epitope_Rep5 964.4614094034799 964.46030993586 24.377 2 -0.03638939819397968 0.014674211393099953 0.1353467254910127 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 4590 6006 AKQLTTTI True NCI_RA007_Epitope_Rep3 874.51238234718 874.51128993586 30.604 2 -0.036424418659523596 0.014674211393099953 0.13541831725259557 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 110403 2863 TEVSPKTAE True H1975_Epitope_Rep1 960.47639076128 960.47528993586 14.619 2 -0.03644882373274686 0.014693463941901706 0.13546822328207536 ['nc|ENSG00000205838|Q6PF05-3|TTC23L', 'ENSG00000205838|ENST00000505624|TTC23L'] 36690 23102 GVISGLFEL True PC9_epitope_Rep2 933.5171333744499 933.51602993586 94.352 2 -0.03645008328691786 0.014693463941901706 0.13547079928678418 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 122436 7520 VGDVTGAQAY True H1975_Epitope_Rep1 979.4610750503098 979.46052496793 33.923 1 -0.036454585045442724 0.014693463941901706 0.13548000642727037 ['ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000185201|ENST00000616316|IFITM2', 'ENSG00000142089|ENST00000399808|IFITM3'] 126299 21427 VLIDDLTTL True PC9_epitope_Rep4 1001.56447748969 1001.56338993586 90.595 2 -0.03646058644294726 0.014693463941901706 0.13549228133541047 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 71284 13489 LYQDGVFKF True NCI_RA007_Epitope_Rep4 1115.56514619603 1115.56404993586 59.096 2 -0.03648200654035822 0.014693463941901706 0.13553609888447535 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 129045 6485 VQNGKVIGV True PC9_epitope_Rep2 912.5392658013598 912.53816993586 30.359 2 -0.03648619155308912 0.014693463941901706 0.13554466098206358 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 87403 9554 QPVSGTQVV True PC9_epitope_Rep5 913.48689587533 913.48578993586 41.708 2 -0.03649390728247267 0.014711779977626275 0.13556044751468305 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 117727 17437 TVVAVVAGV True PC9_epitope_Rep4 813.4960040070499 813.49490993586 75.065 2 -0.036503337991978635 0.014711779977626275 0.1355797446183089 ['ENSG00000105281|ENST00000542575|SLC1A5'] 71121 24199 LYLPFSLTF True PC9_epitope_Rep3 1099.59538369515 1099.5942899358602 98.372 2 -0.03650965584302144 0.014711779977626275 0.13559267323444105 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 78487 8757 NYNNQSSNF True PC9_epitope_Rep3 1086.4366512076201 1086.43554993586 38.638 2 -0.036513136044847926 0.014711779977626275 0.13559979534644936 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 5670 8012 APAEPGWKA True PC9_epitope_Rep5 925.4657665079299 925.46466993586 35.756 2 -0.03651744508040367 0.014711779977626275 0.1356086139882999 ['nc|ENSG00000091732|Q86WB0-3|ZC3HC1', 'nc|ENSG00000091732|Q86WB0-2|ZC3HC1', 'ENSG00000091732|ENST00000358303|ZC3HC1'] 80068 15822 PFKSPSIGF True PC9_epitope_Rep4 978.5174677276199 978.51636993586 68.783 2 -0.036522045286711755 0.014711779977626275 0.13561802895256558 ['ENST00000486283.1_1_7:129497270-129520783:-|nuORF', 'ENSG00000186591|ENST00000355621|UBE2H'] 105154 16105 SRFPEALRL True PC9_epitope_Rep5 1087.61382772395 1087.6127299358602 66.938 2 -0.036540640861794704 0.014711779977626275 0.1356560918960494 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 97628 9080 SEFGKIYGP True NCI_RA007_Epitope_Rep3 996.4916469025998 996.49054993586 42.803 2 -0.036559753464347915 0.014711779977626275 0.13569522065876513 ['ENSG00000082781|ENST00000296181|ITGB5'] 34914 8928 GQMKEPIQL True NCI_RA007_Epitope_Rep3 1042.5481162329 1042.5470099358602 42.201 2 -0.03656118136804705 0.014711779977626275 0.13569814427725932 ['ENSG00000105483|ENST00000651546|CARD8', 'ENST00000517510.5_1_19:48707456-48744240:-|nuORF', 'ENST00000522773.5_1_19:48714969-48736545:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-7|CARD8', 'ENST00000522051.5_1_19:48714969-48735770:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-1|CARD8', 'nc|ENSG00000105483|Q9Y2G2-4|CARD8'] 45550 7003 IQRTPKIQVY True NCI_RA007_Epitope_Rep4 1244.7241064489199 1244.72245490379 33.562 3 -0.03657714112810418 0.014732265349627472 0.1357308246234596 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 70873 22676 LYEEAFTVF True PC9_epitope_Rep3 1117.53317736141 1117.53208993586 92.496 2 -0.03658074413173464 0.014732265349627472 0.13573820312739585 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 95499 5182 RWPKKSAEF True PC9_epitope_Rep4 1147.61382772395 1147.61218490379 26.63 3 -0.036603412015385715 0.01477229561473853 0.13578463035614324 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 55983 20470 LASDRYGLLAF True PC9_epitope_Rep5 1224.65027280232 1224.64916993586 83.774 2 -0.036629044971148564 0.01477229561473853 0.13583714342658534 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 75450 8282 NKDDASYSL True PC9_epitope_Rep5 1011.4509042894301 1011.44980993586 36.795 2 -0.03664709472393957 0.01477229561473853 0.13587412936794543 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 27893 11344 FQDRPVSSL True PC9_epitope_Rep3 1047.53490869691 1047.53380993586 48.639 2 -0.036684701422482244 0.01477229561473853 0.135951211514634 ['ENSG00000130147|ENST00000392011|SH3BP4'] 109018 21279 TAIDILTTC True PC9_epitope_Rep5 949.4790336135701 949.47792993586 86.903 2 -0.036685723971215424 0.01477229561473853 0.1359533078370588 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 104663 4713 SQTLPTVK True NCI_RA007_Epitope_Rep2 872.49673228304 872.49562993586 22.96 2 -0.03669330335126939 0.01477229561473853 0.1359688469699518 ['nc|ENSG00000167994|Q8TBN0-2|RAB3IL1', 'ENSG00000167994|ENST00000394836|RAB3IL1'] 134872 10467 VYVQHPITF True NCI_RA007_Epitope_Rep5 1102.5811306133398 1102.58002993586 46.893 2 -0.03669378148787918 0.01477229561473853 0.13596982727879497 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 113124 22300 TLPDLVPQL True PC9_epitope_Rep1 994.5698972232999 994.5693449679301 90.588 1 -0.036725164079925474 0.014792774542078163 0.1360341804889072 ['ENSG00000163811|ENST00000407426|WDR43'] 49272 8236 KEQLPPLAAA True H1975_Epitope_Rep1 1036.5916952970397 1036.5905899358602 36.622 2 -0.036727958641321765 0.014792774542078163 0.1360399120200258 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 34353 6641 GPEGEAVPAA True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 30.453 2 -0.0367606921805641 0.014811688996729612 0.13610705931725076 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 22788 10411 ETYNGHLVSC True PC9_epitope_Rep1 1121.48115887189 1121.48006993586 44.93 2 -0.036794509699974456 0.014811688996729612 0.13617645372410522 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 118419 14506 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47054993586 60.797 2 -0.03679599223502504 0.014811688996729612 0.13617949647026817 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 45333 6178 IQDADRVI True NCI_RA007_Epitope_Rep2 928.4977949122 928.49668993586 28.638 2 -0.03679669061821481 0.014811688996729612 0.13618092984370378 ['ENSG00000167880|ENST00000301607|EVPL'] 103310 16444 SPLSSPLAQA True PC9_epitope_Rep1 969.5131106231698 969.51200993586 68.076 2 -0.036801254920939684 0.014811688996729612 0.13619029794650517 ['ENST00000394540.3_1_11:64010007-64010954:+|nuORF', 'ENST00000541388.1_1_11:64010007-64011498:+|nuORF'] 107343 12489 SVLGKVNEI True PC9_epitope_Rep2 957.54949613189 957.54838993586 53.347 2 -0.036803726384781424 0.014811688996729612 0.1361953707380823 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 5889 7582 APGIPRKD True PC9_epitope_Rep1 852.4817509252399 852.48064993586 33.983 2 -0.03681304320269261 0.014811688996729612 0.13621449507651878 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 32800 15422 GHFPSPIRL True PC9_epitope_Rep1 1022.5661492555399 1022.56504993586 64.14 2 -0.03684833797828906 0.014829033687008247 0.13628695999843748 ['ENSG00000062822|ENST00000440232|POLD1'] 41089 4860 HTQREKIT True PC9_epitope_Rep5 1011.5461420869499 1011.54504993586 23.735 2 -0.036849208717659954 0.014829033687008247 0.1362887480724692 ['ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 115669 8234 TRYQIPKEV True PC9_epitope_Rep4 1132.6240580544797 1132.62241490379 39.134 3 -0.03687795326565053 0.014829033687008247 0.1363477842495597 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 101590 22368 SLLPAIVEL True PC9_epitope_Rep4 953.57973363101 953.57862993586 94.272 2 -0.03688846874290408 0.014829033687008247 0.13636938547826621 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 86192 19895 QIGAKFWEV True PC9_epitope_Rep3 1076.5654805492 1076.5643899358602 81.767 2 -0.03697871788479383 0.014829033687008247 0.13655487315858045 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'chr16:89933367-89933468|452|10.58|0.47|4.5|+|ENST00000557490|TUBB3,TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 47343 22801 IVGDFGIVVV True PC9_epitope_Rep5 1016.5906326678798 1016.58952993586 92.695 2 -0.03697990706299764 0.014829033687008247 0.13655731839451132 ['nc|ENSG00000157064|Q9BZQ4-2|NMNAT2', 'ENSG00000157064|ENST00000287713|NMNAT2'] 30245 19025 FYVGHIDAF True PC9_epitope_Rep4 1067.50763131991 1067.50652993586 81.271 2 -0.03699386620701987 0.014829033687008247 0.1365860239560827 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 120358 5654 VEEGAPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43324496793 26.745 1 -0.03699662940187873 0.014829033687008247 0.13659170666843928 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 138457 8940 YHNPTANSF True PC9_epitope_Rep1 1049.45665837621 1049.45556993586 39.228 2 -0.0369976480142979 0.014829033687008247 0.13659380155964537 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 105240 5696 SRKESYSVY True PC9_epitope_Rep1 1117.5403880001697 1117.53928993586 26.731 2 -0.037009734999075235 0.014829033687008247 0.1366186614609819 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENST00000609585.1_1_1:149399050-149399179:-|nuORF', 'ENST00000412169.1_1_1:120906105-120906168:+|nuORF'] 93000 9117 RPKPSSSPVIF True PC9_epitope_Rep2 1213.68190728377 1213.68025490379 40.408 3 -0.03702398649572504 0.014829033687008247 0.13664797714378876 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 47256 12345 IVCDVPSASA True PC9_epitope_Rep6 960.45863252216 960.45752993586 58.888 2 -0.037027570311875535 0.014829033687008247 0.13665534981063301 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 23634 16837 EWSPYTKIFQF True NCI_RA007_Epitope_Rep3 1444.7027022979998 1444.70160993586 74.099 2 -0.03704368947388023 0.01484856154560027 0.1366885136507456 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 136347 14727 WTEMNTIVY True H1975_Epitope_Rep1 1155.52704643515 1155.52647496793 61.868 1 -0.03705016758051618 0.01484856154560027 0.1367018433481535 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 135608 19942 WLIEDGKVVTV True PC9_epitope_Rep5 1257.69688864157 1257.6957899358601 81.761 2 -0.03705917326246884 0.01484856154560027 0.13672037537647297 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 14059 7543 DRNLQVSL True PC9_epitope_Rep3 943.50869394907 943.50758993586 34.014 2 -0.03709238275292693 0.01484856154560027 0.13678872901902103 ['ENSG00000142959|ENST00000372207|BEST4', 'ENST00000524877.5_1_11:61726936-61727579:+|nuORF', 'nc|ENSG00000127325|Q8N1M1-1|BEST3', 'nc|ENSG00000127325|Q8N1M1-5|BEST3', 'BEST1|p.N428Tfs*54|1|0.4|ENSG00000167995|chr11:61962430-61962430|C/-|frameshift_variant', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000167995|ENST00000378043|BEST1', 'ENSG00000127325|ENST00000330891|BEST3', 'nc|ENSG00000167995|O76090-3|BEST1'] 71204 17403 LYPDHFHLL True PC9_epitope_Rep4 1153.59202965021 1153.59092993586 74.935 2 -0.03709727783831742 0.01484856154560027 0.13679880630871205 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 99697 7295 SIHENFSQA True PC9_epitope_Rep5 1031.4672230599099 1031.4661299358602 33.023 2 -0.037153791636263735 0.014863070014546835 0.13691518496679636 ['ENSG00000125633|ENST00000376300|CCDC93'] 5714 20206 APALLLIPAA True PC9_epitope_Rep6 948.60080342876 948.59970993586 90.396 2 -0.037188225527036496 0.014863070014546835 0.13698612728579085 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 110985 4926 THAPATLEA True PC9_epitope_Rep4 909.45559574705 909.45448993586 25.545 2 -0.037199441837322024 0.014863070014546835 0.13700924100718548 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 90921 12073 REYQDLLNV True NCI_RA007_Epitope_Rep1 1148.5825871653199 1148.5820749679299 50.949 1 -0.03720851755447348 0.014863070014546835 0.13702794548174094 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 71651 11548 MDYLVNNTP True NCI_RA007_Epitope_Rep5 1065.48009624273 1065.47898993586 51.068 2 -0.03721343424438729 0.014863070014546835 0.13703807918541172 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 9697 11453 AYGHFGRDSF True PC9_epitope_Rep1 1155.50975657823 1155.50812490379 48.932 3 -0.037242314873733515 0.014863070014546835 0.13709761474955098 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000477975.2_1_3:112415757-112416508:-|nuORF'] 83369 14724 PTGRSQVFSV True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 61.903 2 -0.03724247770164753 0.014863070014546835 0.13709795045828405 ['ENST00000480631.5_1_3:122920951-122928060:+|nuORF'] 30316 8579 GAAKDLPGV True PC9_epitope_Rep3 826.4548674710599 826.45376993586 37.95 2 -0.03726558930769794 0.014863070014546835 0.13714560619147217 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 108468 17645 SYLTSASSL True PC9_epitope_Rep3 927.45492704071 927.4543749679301 73.064 1 -0.037268401919785234 0.014863070014546835 0.13715140651137073 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 29640 16667 FVIRNIVEA True PC9_epitope_Rep4 1059.6076797143498 1059.60658993586 72.083 2 -0.037285435750422286 0.014863070014546835 0.1371865381271864 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 66383 12523 LSGHLETVILG True NCI_RA007_Epitope_Rep2 1137.63937376545 1137.63826993586 53.325 2 -0.03730036518340689 0.014863070014546835 0.13721733449328008 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 17251 7090 EHAGGEVEL True PC9_epitope_Rep2 939.42977492203 939.42866993586 32.669 2 -0.037338743051581816 0.014863070014546835 0.13729652157353364 ['ENSG00000218891|ENST00000325421|ZNF579'] 98261 10005 SEVEVIHVP True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 46.446 2 -0.0373467950179005 0.014863070014546835 0.13731313952925608 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 65386 10634 LREERAYIL True PC9_epitope_Rep2 1161.6506071554898 1161.64897490379 46.216 3 -0.037398900436299454 0.014863070014546835 0.13742070945716914 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 89063 8308 QVMQGM[Oxidation]GVSA True PC9_epitope_Rep5 1022.4525019763398 1022.4514099358599 36.895 2 -0.03742232331824703 0.014863070014546835 0.13746908372748814 ['ENSG00000169813|ENST00000682386|HNRNPF'] 93188 7817 RPPLNPVSA True PC9_epitope_Rep2 949.53451477409 949.53340993586 35.436 2 -0.03744821461494269 0.014863070014546835 0.1375225692602703 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1'] 62929 21053 LLPDNFIAA True PC9_epitope_Rep2 972.5280324113199 972.52692993586 86.434 2 -0.03745244570378325 0.014863070014546835 0.13753131106070796 ['ENSG00000139684|ENST00000378720|ESD'] 131079 14538 VTDTGALYLY True H1975_Epitope_Rep2 1114.55464108198 1114.5540749679299 61.077 1 -0.03746934283846387 0.014863070014546835 0.13756622575559455 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 5777 6332 APDEKYVAA True PC9_epitope_Rep1 962.4709114580199 962.46980993586 29.167 2 -0.03748040616413838 0.014863070014546835 0.13758908923568122 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 55567 13157 LAGVSSILGAI True PC9_epitope_Rep6 999.5964463243099 999.59534993586 62.249 2 -0.037486280444116116 0.014863070014546835 0.13760123006919006 ['ENSG00000198804|ENST00000361624|MT-CO1'] 42328 13013 IEAELEKVA True PC9_epitope_Rep1 1000.5440763982799 1000.54296993586 54.926 2 -0.03748936518213096 0.014863070014546835 0.13760760582734333 ['ENSG00000100604|ENST00000216492|CHGA'] 119668 10474 VAVEPGAAV True PC9_epitope_Rep4 811.4439684341899 811.44341496793 48.001 1 -0.0374992161427577 0.01487819269999157 0.13762796783319753 ['ENSG00000171421|ENST00000505059|MRPL36'] 28025 14639 FQPPGPQAV True PC9_epitope_Rep2 939.4814165720697 939.48030993586 61.577 2 -0.037538055463036846 0.01487819269999157 0.13770826876327008 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 28772 14101 FSTALYGESDL True H1975_Epitope_Rep1 1201.55028397753 1201.54977496793 59.408 1 -0.037541657894896385 0.01487819269999157 0.13771571844916283 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 75991 21610 NLVPMIIHL True PC9_epitope_Rep5 1048.61032256664 1048.6092299358602 88.164 2 -0.03755317978736244 0.01487819269999157 0.13773954708741903 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.D378N|1|0.11|ENSG00000186432|chr3:160514082-160514082|C/T|missense_variant'] 70330 10136 LVSESSDVLPK True PC9_epitope_Rep4 1172.6288686514001 1172.6277699358602 46.665 2 -0.037562259974733614 0.01487819269999157 0.1377583279469725 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 8 6084 AAAAAAAAAAA True PC9_epitope_Rep5 799.41881631551 799.41770993586 28.392 2 -0.03756960685372939 0.01487819269999157 0.13777352500834197 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 48163 10755 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 49.126 3 -0.03757380292059888 0.01487819269999157 0.13778220510335262 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 8215 10217 ATFTNVFGK True NCI_RA007_Epitope_Rep4 983.5076313199098 983.50652993586 46.156 2 -0.03758053870669595 0.01487819269999157 0.13779613969898558 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 35040 12833 GQVGGEINV True PC9_epitope_Rep5 871.43994568291 871.4393949679301 54.373 1 -0.03760411111599224 0.01487819269999157 0.13784491237715665 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 133920 17444 VYIHPSSALF True PC9_epitope_Rep4 1132.59169529704 1132.5905899358602 75.093 2 -0.0376197319933227 0.01487819269999157 0.13787723927983417 ['ENSG00000067596|ENST00000262415|DHX8'] 46702 15762 ITDVIIGFQ True H1975_Epitope_Rep3 1004.5542471591598 1004.5536749679301 66.074 1 -0.03762934828537614 0.01487819269999157 0.1378971424252248 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 62157 7703 LLEKEREDLY True H1975_Epitope_Rep2 1306.6768814729799 1306.67524490379 34.584 3 -0.03763652415911037 0.01487819269999157 0.13791199581971472 ['ENSG00000102189|ENST00000322349|EEA1', 'EEA1|p.S653*|1|0.32|ENSG00000102189|chr12:92813065-92813065|G/-|frameshift_variant'] 96026 17256 RYLPKGFLNQF True PC9_epitope_Rep6 1381.7506555499297 1381.7495499358602 78.974 2 -0.03763796721799066 0.01487819269999157 0.1379149829481451 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 46418 15381 ISSQDGPLSV True PC9_epitope_Rep4 1001.5029398622898 1001.50184993586 67.095 2 -0.03764882624507966 0.01487819269999157 0.13793746250568575 ['ENSG00000105928|ENST00000645220|GSDME', 'nc|ENSG00000105928|O60443-3|GSDME', 'ENST00000469133.1_1_7:24747667-24749942:-|nuORF'] 59164 20595 LFAGFENFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 87.371 2 -0.03766043957143974 0.01487819269999157 0.13796150628805895 ['ENSG00000188269|ENST00000322301|OR7A5'] 47818 20651 IYGLLKNPF True PC9_epitope_Rep3 1063.60661708519 1063.6055299358602 84.705 2 -0.03766189934275661 0.01487819269999157 0.13796452874185075 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1', 'ENST00000463270.1_1_10:27418274-27425210:-|nuORF'] 41463 12299 HYKPTPLYF True PC9_epitope_Rep6 1164.59678067748 1164.59568993586 58.697 2 -0.0376695297166304 0.01487819269999157 0.13798032814233865 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 87192 21889 QPILLELEA True PC9_epitope_Rep3 1024.580461907 1024.57936993586 89.501 2 -0.03768038214278926 0.01487819269999157 0.13800280120083097 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 67432 5721 LSSPRASQSL True PC9_epitope_Rep6 1044.55637241748 1044.55526993586 30.156 2 -0.037682378959537126 0.01487819269999157 0.13800693645057677 ['ENSG00000140471|ENST00000314742|LINS1', 'ENST00000559169.1_1_15:101109445-101112292:-|nuORF'] 125227 13023 VIISAPSAD True PC9_epitope_Rep2 871.46509780159 871.46400993586 55.374 2 -0.0377226665698543 0.014893617021276596 0.13809038673088936 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 71776 4315 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 21.714 2 -0.037733453745318515 0.014893617021276596 0.13811273665507492 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 114304 14554 TPQEKIFIAA True PC9_epitope_Rep5 1116.6179100448799 1116.6168099358601 60.982 2 -0.037755784448788604 0.014893617021276596 0.13815901132595687 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7', 'ENST00000505692.1_1_4:122780107-122782831:-|nuORF', 'ENST00000502444.1_1_4:122782546-122791468:-|nuORF'] 24605 21553 FAIPGSIFL True PC9_epitope_Rep6 963.5429541994699 963.54184993586 95.778 2 -0.03776549342811734 0.014893617021276596 0.1381791339567518 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 48502 15794 KAIGAVPLI True PC9_epitope_Rep4 880.57458868092 880.57348993586 68.677 2 -0.03778091144360517 0.014893617021276596 0.1382110930718356 ['ENSG00000117984|ENST00000236671|CTSD', 'ENST00000497544.2_2_11:1775127-1776230:-|nuORF'] 122629 13320 VGFTNSYFGN True NCI_RA007_Epitope_Rep4 1104.48762415132 1104.48652993586 58.384 2 -0.037796628635142104 0.014893617021276596 0.13824367745190297 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1'] 10191 18515 AYYPAQGVQQF True PC9_epitope_Rep2 1270.59823722946 1270.5971499358602 76.562 2 -0.03783211925679609 0.014893617021276596 0.13831727449274686 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 130387 18750 VSLESVEGV True PC9_epitope_Rep4 917.4705771048499 917.46948993586 80.205 2 -0.0378347664481683 0.014893617021276596 0.13832276504024477 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 121983 10369 VFTTGFSR True PC9_epitope_Rep2 913.4657665079299 913.46466993586 45.209 2 -0.03783760014060943 0.014893617021276596 0.13832864257268232 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B', 'ENST00000547361.1_1_12:109046046-109052582:-|nuORF', 'ENST00000552030.5_1_12:109042755-109052582:-|nuORF', 'ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 71521 19868 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep2 1000.5415746809199 1000.54046993586 82.405 2 -0.03784819061146278 0.014893617021276596 0.13835061039482052 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 87336 8879 QPRYPVNSV True PC9_epitope_Rep3 1058.55089311422 1058.5497899358602 39.103 2 -0.0378484044414303 0.014893617021276596 0.13835105396666791 ['ENSG00000120438|ENST00000321394|TCP1'] 36913 19755 GVLPQLSMV True PC9_epitope_Rep6 942.5208388559 942.51974993586 88.647 2 -0.03785970630345598 0.014893617021276596 0.138374500067761 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 106689 16112 STTPYLQSV True PC9_epitope_Rep5 994.4971262058599 994.4965749679301 66.965 1 -0.037862710758297294 0.014893617021276596 0.13838073336234577 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2'] 90331 4586 REFEERHIP True H1975_Epitope_Rep2 1211.6047195922297 1211.60308490379 22.744 3 -0.03787024628537712 0.014893617021276596 0.1383963680314378 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 90035 5909 RDTQALLSA True NCI_RA007_Epitope_Rep3 973.51925863277 973.51816993586 30.217 2 -0.03788141055078034 0.014893617021276596 0.13841953377102947 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF'] 20057 14785 EMDSPILGDY True H1975_Epitope_Rep3 1138.4852411928198 1138.48467496793 62.25 1 -0.03788229745397898 0.014893617021276596 0.1384213741981882 ['ENSG00000182195|ENST00000370526|LDOC1'] 5374 8207 ALSGHLETV True PC9_epitope_Rep6 925.48689587533 925.48578993586 41.142 2 -0.0378972740023492 0.014893617021276596 0.13845245476196116 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant'] 11886 7963 DHIKDSFHSL True PC9_epitope_Rep4 1197.57783613805 1197.57619490379 38.072 3 -0.03790590177381805 0.014893617021276596 0.13847036195345888 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 120189 9204 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48472993586 40.357 2 -0.0379286664773692 0.014914368772513745 0.13851761823883713 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 91816 9794 RKILAAIIM True NCI_RA007_Epitope_Rep3 1027.65760711223 1027.6565099358602 45.588 2 -0.03801042020645545 0.014933861319403488 0.13868741677103533 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 89149 12219 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.5758349679301 51.987 1 -0.038094539857840934 0.014933861319403488 0.13886227523877076 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 17617 6444 EHINSVSAM True PC9_epitope_Rep4 986.44913046762 986.44802993586 31.884 2 -0.038094658429836024 0.014933861319403488 0.1388625218174321 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 37531 20424 GVVFSVTTV True PC9_epitope_Rep2 907.5014833103099 907.50038993586 83.988 2 -0.038109947992905825 0.014933861319403488 0.13889431998656337 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENST00000489758.1_1_1:25072044-25124343:+|nuORF'] 5473 16751 ALVVQVAEA True PC9_epitope_Rep3 898.5123823471799 898.51128993586 69.574 2 -0.03811259945019407 0.014933861319403488 0.13889983480076948 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 61323 17995 LIRGESLII True PC9_epitope_Rep4 1012.62808080576 1012.62698993586 77.275 2 -0.03812616564358751 0.014952405020638531 0.13892805367569386 ['ENSG00000162753|ENST00000367714|SLC9C2', 'SLC9C2|p.S555Vfs*10|1|0.12|ENSG00000162753|chr1:173535942-173535943|-/AC|frameshift_variant'] 2919 5520 AEYLQPKAA True NCI_RA007_Epitope_Rep4 989.5181960036099 989.51708993586 27.827 2 -0.03813830359230435 0.014952405020638531 0.1389533049415839 ['TGFBR3|p.E219K|1|0.13|ENSG00000069702|chr1:91729887-91729887|C/T|missense_variant', 'TGFBR3|p.C572Afs*6|1|0.9|ENSG00000069702|chr1:91716388-91716388|A/-|frameshift_variant', 'nc|ENSG00000069702|Q03167-2|TGFBR3', 'ENSG00000069702|ENST00000212355|TGFBR3', 'ENST00000532540.5_1_1:92149298-92327033:-|nuORF'] 5823 15152 APELQGVEV True PC9_epitope_Rep6 940.4865615221598 940.48546993586 70.356 2 -0.03814971498474378 0.014952405020638531 0.13897704752372894 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 118093 18058 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 82.09 2 -0.03815689723952193 0.014952405020638531 0.13899199234532914 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 8001 17457 ATDIPCLLY True H1975_Epitope_Rep2 1007.4997690581499 1007.49917496793 72.441 1 -0.03816731643671583 0.014952405020638531 0.13901367450982546 ['ENSG00000135249|ENST00000257700|RINT1', 'ENST00000474123.1_1_7:105190513-105195680:+|nuORF'] 32798 16600 GHFNSMVAL True PC9_epitope_Rep1 974.4643866089399 974.46328993586 68.676 2 -0.03817364652799156 0.014952405020638531 0.1390268484271731 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 84996 12619 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 56.882 2 -0.03820631279248534 0.014952405020638531 0.13909484540380482 ['ENSG00000113369|ENST00000265138|ARRDC3'] 114534 10520 TQAPGNPVL True PC9_epitope_Rep6 895.4763311916299 895.4752299358599 51.253 2 -0.03821638374165221 0.014952405020638531 0.1391158132513869 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 139800 12049 YPIEHGIITN True PC9_epitope_Rep3 1155.5924235730297 1155.5913299358601 51.384 2 -0.038255079679396266 0.014987580516145328 0.1391963984506693 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 85733 8704 QHAVGIVV True PC9_epitope_Rep6 821.47593726881 821.47484993586 43.333 2 -0.03826962513250002 0.014987580516145328 0.1392266978043166 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 99684 18367 SIGTIYFSS True PC9_epitope_Rep5 973.4756624852901 973.47511496793 75.668 1 -0.038270674833265905 0.014987580516145328 0.13922888458714597 ['ZBTB40|p.R36Sfs*19|1|0.46|ENSG00000184677|chr1:22490055-22490056|GG/-|frameshift_variant'] 139919 6868 YQAEAREAL True PC9_epitope_Rep2 1049.5141732523298 1049.5130699358601 31.82 2 -0.03827760873887862 0.014987580516145328 0.13924333018389543 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 39884 15156 HPEKCSECSY True H1975_Epitope_Rep2 1181.44814449145 1181.4464849037902 63.453 3 -0.038297327891597725 0.014987580516145328 0.13928441713979944 ['ZFP64|p.E437Rfs*22|1|0.1|ENSG00000020256|chr20:52152883-52152883|C/-|frameshift_variant', 'nc|ENSG00000020256|Q9NTW7-6|ZFP64', 'nc|ENSG00000020256|Q9NTW7-4|ZFP64', 'ENSG00000020256|ENST00000216923|ZFP64'] 105131 18640 SRFGKYFEI True PC9_epitope_Rep1 1145.58694426977 1145.58529490379 76.488 3 -0.038315153501321794 0.014987580516145328 0.13932156570245413 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 121797 16979 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 70.133 2 -0.03835800982374133 0.014987580516145328 0.1394109054809016 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 119177 12535 VAKGGLGLI True PC9_epitope_Rep1 826.5276384884999 826.52654993586 53.086 2 -0.03836242525203938 0.014987580516145328 0.13942011222096415 ['ENSG00000101843|ENST00000217958|PSMD10'] 107949 8347 SVYDGHGGEEV True PC9_epitope_Rep1 1147.47818166643 1147.47708993586 36.94 2 -0.03836452790997738 0.014987580516145328 0.13942449667864734 ['ENSG00000115241|ENST00000344034|PPM1G'] 140297 6917 YRASGEQL True PC9_epitope_Rep5 922.45084471978 922.44974993586 31.576 2 -0.038376773947762184 0.014987580516145328 0.13945003392889221 ['nc|ENSG00000106328|Q9NQT6-2|FSCN3'] 72502 9095 MLDSHEELY True H1975_Epitope_Rep3 1135.48557554599 1135.48446993586 39.972 2 -0.03840531476585269 0.014987580516145328 0.1395095636519146 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.L3042dup|1|0.12|ENSG00000197102|chr14:102027693-102027694|-/CTG|inframe_insertion'] 27007 19529 FLEQELETI True PC9_epitope_Rep6 1120.56520576568 1120.5641099358602 87.781 2 -0.03841883251476913 0.014987580516145328 0.13953776458518322 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 70098 19655 LVPDVVNEV True PC9_epitope_Rep3 982.53351171458 982.53240993586 80.838 2 -0.03843485481364661 0.014987580516145328 0.1395711955031512 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 8943 14358 AVFVRGVGV True PC9_epitope_Rep1 902.5337864980997 902.53268993586 60.052 2 -0.038453673313229755 0.014987580516145328 0.1396104676256087 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 90548 7893 REMDSCPVV True H1975_Epitope_Rep3 1034.4525015958998 1034.45140993586 35.336 2 -0.038468301172470055 0.014987580516145328 0.13964099946777395 ['ENSG00000119912|ENST00000265986|IDE', 'nc|ENSG00000119912|P14735-2|IDE', 'ENST00000496903.5_1_10:94214203-94257457:-|nuORF'] 21420 15606 ERIPDVAAL True PC9_epitope_Rep4 982.5447451046199 982.54419496793 67.952 1 -0.03846838663544187 0.014987580516145328 0.13964117786260768 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 126588 8943 VLLVPGPEKEN True H1975_Epitope_Rep3 1193.6655885132898 1193.66448993586 39.396 2 -0.03847605955912856 0.014987580516145328 0.13965719489517528 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 70099 18787 LVPDVVNEV True PC9_epitope_Rep4 982.53351171458 982.53240993586 80.349 2 -0.038477984881597434 0.014987580516145328 0.1396612141501922 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 16205 3680 EEEEPVKEA True H1975_Epitope_Rep1 1058.4767846840998 1058.4756899358601 18.608 2 -0.03848146038646537 0.014987580516145328 0.13966846972369823 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 131235 21218 VTEVELLLY True H1975_Epitope_Rep3 1077.5957776179698 1077.59527496793 88.621 1 -0.03848846974258253 0.014987580516145328 0.13968310344579468 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 109676 4217 TEAVPRAPA True H1975_Epitope_Rep3 910.4872302284998 910.48612993586 21.338 2 -0.03850977168693358 0.014987580516145328 0.13972758270764707 ['ENSG00000168476|ENST00000306306|REEP4'] 103463 8762 SPPVPGPSA True PC9_epitope_Rep5 807.41266830591 807.41156993586 38.645 2 -0.03851589304024355 0.014987580516145328 0.13974036608114915 ['ENSG00000143756|ENST00000366862|FBXO28'] 125096 12265 VIELLNPQRL True NCI_RA007_Epitope_Rep2 1193.71320741205 1193.71210993586 52.308 2 -0.038621356908803056 0.015006419295771683 0.13996073208351048 ['ENST00000581395.5_1_17:8053998-8059672:-|nuORF'] 2807 5853 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 27.503 2 -0.03863935698237999 0.015006419295771683 0.13999836637469684 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 137651 12345 YEIEYMEKI True H1975_Epitope_Rep3 1216.56857689396 1216.5674699358601 52.671 2 -0.03863979774383093 0.015006419295771683 0.1399992879973999 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-2|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 114518 11740 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.4752299358599 50.492 2 -0.03864077881515863 0.015006419295771683 0.1400013394110244 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 125264 6744 VILHLKEDQTE True NCI_RA007_Epitope_Rep4 1323.7034305739896 1323.70177490379 32.561 3 -0.03865986912473443 0.015006419295771683 0.14004126113289525 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 21594 18870 ERQRWLVAL True PC9_epitope_Rep1 1169.6669259259697 1169.66527490379 77.368 3 -0.03865992685547569 0.015006419295771683 0.14004138187119536 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 35972 20877 GTVEQIVYL True PC9_epitope_Rep2 1020.5491617787197 1020.54806993586 85.746 2 -0.03867225138003636 0.015006419295771683 0.14006715902816727 ['ENSG00000182481|ENST00000330459|KPNA2'] 7647 19130 ASIDILHSI True PC9_epitope_Rep4 967.5338460677501 967.53274993586 81.676 2 -0.038692018983655825 0.015017667844522967 0.14010851027647558 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 1258 14860 AEDGFFVPP True H1975_Epitope_Rep3 977.4494477374499 977.4488949679301 62.543 1 -0.03870756546767134 0.015017667844522967 0.14014103724095048 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 130284 11368 VSGSTGILS True H1975_Epitope_Rep2 819.4337976733101 819.43324496793 48.777 1 -0.03873709979839879 0.015017667844522967 0.14020284406708172 ['nc|ENSG00000100336|Q9BPW4-3|APOL4', 'ENSG00000100336|ENST00000683024|APOL4', 'nc|ENSG00000100336|Q9BPW4|APOL4'] 103567 11467 SPSLSPLAA True H1975_Epitope_Rep3 841.4545331178899 841.4539849679301 49.229 1 -0.03882878142099494 0.015017667844522967 0.14039482358225847 ['ENSG00000166341|ENST00000299441|DCHS1'] 48551 14632 KALSIFNEL True NCI_RA007_Epitope_Rep1 1033.58079626017 1033.5796899358602 60.966 2 -0.03883161021407509 0.015017667844522967 0.14040074981847142 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 37024 12123 GVPDKLIQA True PC9_epitope_Rep5 939.5389314481898 939.53782993586 51.62 2 -0.0388398148735269 0.015017667844522967 0.14041793928045196 ['nc|ENSG00000067208|O60447|EVI5', 'nc|ENSG00000067208|O60447-2|EVI5', 'ENSG00000067208|ENST00000684568|EVI5'] 111185 17273 THIDTVINAL True PC9_epitope_Rep4 1095.59242357303 1095.5913299358601 74.446 2 -0.03884204499500766 0.015017667844522967 0.14042261181898508 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF'] 137633 6137 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.3765249679301 28.618 1 -0.03884577451152585 0.015017667844522967 0.14043042611465018 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 77987 14735 NVPDSFNEV True PC9_epitope_Rep6 1019.45598966987 1019.45488993586 68.627 2 -0.038851500380705783 0.015017667844522967 0.14044242384909614 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 94234 9557 RRQEAIYEM True PC9_epitope_Rep5 1194.5815416194998 1194.5798849037901 41.719 3 -0.03885179974775842 0.015017667844522967 0.14044305114853695 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000465087.1_1_10:5494419-5494892:+|nuORF'] 142436 20020 YYFEGIKQTF True PC9_epitope_Rep1 1294.6233893481397 1294.6217549037901 81.832 3 -0.03885977584720376 0.015017667844522967 0.14045976511077046 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 104549 12008 SQPPVFKV True PC9_epitope_Rep2 900.5069030439199 900.50580993586 51.507 2 -0.03887334760920164 0.015017667844522967 0.14048820787795632 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 116409 5920 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 28.163 2 -0.03888355685291752 0.015017667844522967 0.14050960625215358 ['ENSG00000065183|ENST00000349139|WDR3'] 6470 9652 APSGNYVAC True PC9_epitope_Rep3 880.3749028981999 880.37380993586 42.074 2 -0.038886781173788174 0.015017667844522967 0.14051636481884255 ['ENSG00000114450|ENST00000232564|GNB4'] 108233 20882 SYIDLLQRF True PC9_epitope_Rep4 1153.6131590176099 1153.61206993586 88.479 2 -0.038915343783054 0.015017667844522967 0.14057624501009708 ['ENSG00000127580|ENST00000293883|WDR24'] 49273 8330 KEQLPPLAAA True H1975_Epitope_Rep1 1036.5916952970397 1036.5905899358602 36.974 2 -0.0389162447675893 0.015017667844522967 0.14057813416051396 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 126769 16998 VLPGVDALSNI True NCI_RA007_Epitope_Rep1 1096.61282466444 1096.61172993586 70.245 2 -0.03893211011668709 0.015017667844522967 0.14061140281172263 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 114523 12299 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.4752299358599 52.334 2 -0.038934519881413596 0.015017667844522967 0.14061645639971845 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 4094 6263 AHQQSIPAV True PC9_epitope_Rep6 949.4981292653698 949.49702993586 32.593 2 -0.03894571177693097 0.015017667844522967 0.1406399288446166 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 13083 5683 DLQEPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43270993586 26.858 2 -0.038977870247828436 0.015017667844522967 0.14070738848988434 ['ENSG00000142530|ENST00000600100|GARIN5A', 'nc|ENSG00000142530|Q6IPT2-2|GARIN5A'] 139172 21266 YLEDGFAYV True PC9_epitope_Rep2 1075.48622716899 1075.4851299358602 87.26 2 -0.03899169949530006 0.015017667844522967 0.14073640511434815 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 107392 21827 SVLLLNPAL True PC9_epitope_Rep2 938.58006798418 938.57896993586 89.432 2 -0.039013848356789435 0.015017667844522967 0.14078288635537048 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 7850 3452 ASYVASTKYQK True NCI_RA007_Epitope_Rep4 1244.6401020414398 1244.63845490379 19.205 3 -0.03902384489980191 0.015017667844522967 0.1408038683028928 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'ENST00000522792.1_1_5:138268134-138269775:+|nuORF', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 2894 8021 AEVTSTLEA True H1975_Epitope_Rep2 919.44984166027 919.44874993586 35.8 2 -0.03902624134696423 0.015017667844522967 0.14080889856557455 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 76475 9410 NQGPHSPIL True PC9_epitope_Rep3 961.4981292653699 961.49702993586 41.133 2 -0.039026634683363697 0.015017667844522967 0.14080972420987728 ['ENSG00000100147|ENST00000255784|CCDC134'] 63953 9476 LNSVVQSV True PC9_epitope_Rep1 844.4654321547599 844.4648849679301 41.307 1 -0.03903239548258242 0.015017667844522967 0.14082181695561571 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 111174 9534 THGPPVQL True PC9_epitope_Rep5 847.45520182423 847.45410993586 41.631 2 -0.03904232842256415 0.015017667844522967 0.14084266925685418 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 46556 7381 ITADVNHNL True PC9_epitope_Rep6 995.50360856863 995.50250993586 37.599 2 -0.03904876447651181 0.015017667844522967 0.14085618162008412 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 97326 3628 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41302993586 18.361 2 -0.03904922524237055 0.015017667844522967 0.14085714902182675 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 70851 19861 LYDIVFKHF True PC9_epitope_Rep5 1180.6280808057602 1180.62643490379 81.445 3 -0.039058742619805215 0.015017667844522967 0.14087713224219003 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 97420 11100 SEEDPVTSIP True H1975_Epitope_Rep2 1072.49243474824 1072.49187496793 47.731 1 -0.039111392597445886 0.015017667844522967 0.14098771336593477 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 89959 4780 RDFEAQAAA True NCI_RA007_Epitope_Rep4 977.4566583762097 977.45556993586 24.823 2 -0.03911690403711905 0.015037435854294607 0.1409992924385491 ['ENSG00000105472|ENST00000250340|CLEC11A'] 88494 22173 QSVDLVFPV True PC9_epitope_Rep5 1002.5385970950199 1002.53807496793 90.326 1 -0.03914025780554858 0.015037435854294607 0.14104836380653438 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 71650 11357 MDYLVNNTP True NCI_RA007_Epitope_Rep4 1065.48009624273 1065.47898993586 50.596 2 -0.03914662936179702 0.015037435854294607 0.14106175382099026 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 9424 2626 AVTTVVNPK True NCI_RA007_Epitope_Rep3 927.5389314481899 927.53782993586 14.79 2 -0.03918953100599581 0.015037435854294607 0.14115193503421403 ['ENSG00000150093|ENST00000302278|ITGB1'] 14411 17182 DTDIVDEAIYY True H1975_Epitope_Rep3 1315.58197802863 1315.58147496793 71.729 1 -0.03919254049415792 0.015052452330397124 0.14115826256244118 ['ENSG00000111229|ENST00000228825|ARPC3'] 58056 7553 LEIKPPPSA True H1975_Epitope_Rep2 950.54368247546 950.54258993586 34.006 2 -0.0392042631376973 0.015052452330397124 0.14118291153804852 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P1059Rfs*35|1|0.35|ENSG00000080603|chr16:30720897-30720897|C/-|frameshift_variant', 'SRCAP|p.Q1189Sfs*2|1|0.18|ENSG00000080603|chr16:30722142-30722142|G/-|frameshift_variant', 'SRCAP|p.A1596Sfs*250|1|0.25|ENSG00000080603|chr16:30724210-30724214|GCAAT/-|frameshift_variant'] 53114 5734 KPTASPSSIAA True PC9_epitope_Rep5 1028.55022440788 1028.54912993586 27.049 2 -0.03921149692894255 0.015052452330397124 0.1411981233267681 ['ENSG00000056097|ENST00000265069|ZFR'] 106534 10844 STLRALETV True PC9_epitope_Rep4 988.55530978832 988.55420993586 49.471 2 -0.03923236682917313 0.015052452330397124 0.14124201634641312 ['ENSG00000056586|ENST00000357244|RC3H2', 'nc|ENSG00000056586|Q9HBD1-6|RC3H2', 'nc|ENSG00000056586|Q9HBD1-4|RC3H2'] 76327 19508 NPTLILAA True PC9_epitope_Rep1 811.4803539429099 811.47924993586 79.856 2 -0.039234323791401196 0.015052452330397124 0.1412461326451527 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 133174 12984 VVRNEQVEI True PC9_epitope_Rep2 1084.58767254576 1084.58656993586 55.231 2 -0.03926096584100689 0.015052452330397124 0.14130217984303856 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 17089 13960 EGLEELLSA True NCI_RA007_Epitope_Rep1 959.48114178855 959.48004993586 58.324 2 -0.039267823305679656 0.015052452330397124 0.14131660837892485 ['ENSG00000111671|ENST00000524270|SPSB2', 'nc|ENSG00000111671|Q99619-2|SPSB2'] 139994 21309 YQDPSVLYI True PC9_epitope_Rep3 1096.54407639828 1096.5429699358601 87.261 2 -0.03926796489188823 0.015052452330397124 0.14131690629556753 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 2792 9498 AEVAIVSAA True H1975_Epitope_Rep2 829.4545331178899 829.4539849679301 41.503 1 -0.03930343910819341 0.015052452330397124 0.1413915621026498 ['ENST00000440088.5_1_7:77325266-77325488:-|nuORF'] 104008 15914 SQDFPGSNL True PC9_epitope_Rep2 963.42977492203 963.42922496793 66.465 1 -0.03934938650712395 0.015052452330397124 0.14148829799306098 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 111161 16042 THGIFTIST True PC9_epitope_Rep3 975.5025459394701 975.50144993586 66.855 2 -0.03935561837840228 0.015052452330397124 0.14150142174090338 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 7705 4268 ASMPHPLRSR True NCI_RA007_Epitope_Rep4 1150.60294577042 1150.60129490379 22.749 3 -0.039375593560228475 0.015052452330397124 0.1415434931189616 ['nc|ENSG00000158352|Q9ULL8-2|SHROOM4', 'ENSG00000158352|ENST00000376020|SHROOM4'] 77937 7300 NVKVDPEIQ True PC9_epitope_Rep6 1040.5502244078798 1040.54912993586 37.227 2 -0.03938627226469683 0.015052452330397124 0.1415659878472204 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 40930 4302 HSSNVKVVL True NCI_RA007_Epitope_Rep5 981.5607295219299 981.55962993586 23.134 2 -0.03940735868377462 0.015052452330397124 0.14161041347701392 ['ENSG00000055483|ENST00000449938|USP36'] 71445 18452 LYTGTVSSF True PC9_epitope_Rep3 973.47566248529 973.47456993586 76.179 2 -0.03943770230723182 0.015052452330397124 0.1416743588621788 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 136349 14715 WTEMNTIVY True H1975_Epitope_Rep3 1155.52704643515 1155.52647496793 61.974 1 -0.03944193695232754 0.015052452330397124 0.1416832843796428 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 26986 10725 FLEGVGIR True NCI_RA007_Epitope_Rep2 889.5021520166499 889.50104993586 46.318 2 -0.0394478505938348 0.015052452330397124 0.14169574940817115 ['ENSG00000101331|ENST00000452892|CCM2L'] 651 8216 AATAVTQAL True NCI_RA007_Epitope_Rep3 844.4654321547599 844.46432993586 39.451 2 -0.03947345239016634 0.015052452330397124 0.14174972242788247 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 32226 13752 GEYGNLVTI True NCI_RA007_Epitope_Rep4 964.48656152216 964.48546993586 60.124 2 -0.03947949109820017 0.015052452330397124 0.14176245507097301 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 63541 21685 LM[Oxidation]ALLTLGI True PC9_epitope_Rep5 959.57254045603 959.57144993586 88.459 2 -0.039500022294825035 0.015069990331665896 0.14180575090436615 ['ENSG00000131966|ENST00000254286|ACTR10'] 93065 13941 RPNDIMAEV True PC9_epitope_Rep1 1043.50697969691 1043.50647496793 58.46 1 -0.03950072589963517 0.015069990331665896 0.14180723481052435 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 81798 18412 PLPPPLPPP True PC9_epitope_Rep2 923.54803957991 923.54694993586 76.152 2 -0.039526638816750975 0.015069990331665896 0.14186189250880255 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 28803 15608 FSVICPAVL True PC9_epitope_Rep5 947.51502519947 947.51392993586 65.047 2 -0.03952872780927743 0.015069990331665896 0.14186629939965587 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 45332 5994 IQDADRVI True NCI_RA007_Epitope_Rep2 928.4977949122 928.49668993586 27.925 2 -0.039529094211009204 0.015069990331665896 0.14186707236179036 ['ENSG00000167880|ENST00000301607|EVPL'] 134293 22979 VYNPVIYVF True PC9_epitope_Rep1 1112.5906326678798 1112.5895299358601 93.186 2 -0.03953507187228748 0.015069990331665896 0.14187968325015665 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 90616 4647 REMPVKVEA True NCI_RA007_Epitope_Rep3 1057.5590152697698 1057.5579099358602 25.202 2 -0.039561110908163215 0.015069990331665896 0.14193462573505472 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 142127 22143 YVPPELITL True PC9_epitope_Rep5 1043.59029831471 1043.58977496793 90.21 1 -0.03956882444741302 0.015069990331665896 0.14195090406474845 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 36655 21786 GVIGGGVFQAI True PC9_epitope_Rep3 1016.5654805491998 1016.56438993586 89.098 2 -0.0395715477782573 0.015069990331665896 0.14195665156559883 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 4215 14157 AIATELAQA True PC9_epitope_Rep5 886.4759968384598 886.47488993586 59.466 2 -0.03958022043425324 0.015069990331665896 0.14197495595803128 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 117983 9852 TYDKGYQF True PC9_epitope_Rep4 1020.45526139388 1020.45416993586 45.545 2 -0.03958713078718433 0.015069990331665896 0.14198954198478908 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 2803 5835 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 27.515 2 -0.03959472155374822 0.01508720319394831 0.14200556534733394 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 75050 9114 NHSTLHSVF True PC9_epitope_Rep5 1040.5039429218 1040.50284993586 40.002 2 -0.0396361283310853 0.01508720319394831 0.1420929922341993 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 86295 17877 QISDTSVVL True PC9_epitope_Rep5 960.51277627 960.51222496793 73.782 1 -0.03964035228668713 0.01508720319394831 0.14210191277557058 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 84379 12200 QAADLAYQL True NCI_RA007_Epitope_Rep4 991.4974605590301 991.49691496793 53.921 1 -0.039684646214953545 0.01508720319394831 0.14219547930996063 ['ENSG00000147113|ENST00000398000|DIPK2B'] 118471 21016 TYPNTYIF True PC9_epitope_Rep1 1017.48074786573 1017.47964993586 85.667 2 -0.0397258297295109 0.01508720319394831 0.14228251227119004 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 118850 13199 VAASDIAAL True PC9_epitope_Rep5 829.4545331178899 829.45342993586 55.777 2 -0.039734050616228006 0.01508720319394831 0.14229988969274135 ['ENSG00000131899|ENST00000316843|LLGL1'] 11802 6248 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 29.43 2 -0.0397479043779941 0.01508720319394831 0.14232917716462168 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 35105 14905 GQVPPLQSV True PC9_epitope_Rep1 923.50763131991 923.50652993586 62.153 2 -0.03975230611428024 0.01508720319394831 0.14233848347354272 ['ENSG00000106351|ENST00000300176|AGFG2'] 112210 5140 TKKKVFETL True NCI_RA007_Epitope_Rep4 1092.6542955536 1092.6531899358602 26.291 2 -0.03975583523676737 0.01508720319394831 0.142345945164167 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1'] 123313 8614 VGLQVVAVK True H1975_Epitope_Rep1 911.5804023373498 911.57930993586 38.061 2 -0.03979814410043812 0.01508720319394831 0.14243541990844621 ['ENSG00000144381|ENST00000388968|HSPD1'] 31479 13200 GEAPVPVLP True H1975_Epitope_Rep2 877.4909186266099 877.49037496793 55.899 1 -0.03980102708256127 0.01508720319394831 0.14244151820080017 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 92807 6814 RPAPALAPA True PC9_epitope_Rep3 862.50248636982 862.50138993586 31.228 2 -0.039813751770936545 0.01508720319394831 0.14246843646222743 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1'] 40439 8083 HRAPVVAIA True PC9_epitope_Rep1 932.5555845718399 932.55448993586 35.915 2 -0.039833245571774166 0.015105676709105424 0.14250968092440508 ['ENSG00000131899|ENST00000316843|LLGL1'] 92956 11454 RPHTVLTVI True PC9_epitope_Rep2 1034.6236641316598 1034.6225699358602 49.377 2 -0.039853774816268166 0.015105676709105424 0.14255312475590023 ['ENSG00000183751|ENST00000568546|TBL3'] 48784 18740 KDLPWPPP True PC9_epitope_Rep1 948.5069030439199 948.50580993586 76.873 2 -0.03989903118669079 0.015105676709105424 0.1426489271253175 ['ENSG00000138606|ENST00000690270|SHF', 'nc|ENSG00000138606|Q7M4L6|SHF'] 70276 6841 LVRPPTEQA True PC9_epitope_Rep1 1009.55564414149 1009.55454993586 31.119 2 -0.03992254271176175 0.015105676709105424 0.14269871516964033 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 118735 10935 TYVSGTLRF True NCI_RA007_Epitope_Rep4 1042.54474510462 1042.54364993586 48.922 2 -0.039952345347954644 0.015105676709105424 0.14276184192267527 ['ENSG00000134255|ENST00000357172|CEPT1'] 43898 12084 IHYNSHFEVP True PC9_epitope_Rep3 1241.5829215184901 1241.58127490379 51.524 3 -0.03998027505322063 0.015105676709105424 0.14282101839635927 ['nc|ENSG00000080845|Q9Y2H0-1|DLGAP4', 'ENSG00000080845|ENST00000339266|DLGAP4', 'DLGAP4|p.R73C|1|0.18|ENSG00000080845|chr20:36431934-36431934|C/T|missense_variant'] 36087 20497 GVAETLVLV True PC9_epitope_Rep4 899.5327834385898 899.5322349679301 86.992 1 -0.03999589956100204 0.015105676709105424 0.14285413017938967 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 72974 18329 MQIQRVVI True PC9_epitope_Rep5 985.5742714110899 985.57316993586 75.518 2 -0.04002799612684542 0.015105676709105424 0.14292216593404158 ['ENST00000392987.7_1_19:14817461-14817590:+|nuORF', 'ENST00000601134.5_1_19:14805840-14818739:+|nuORF', 'ENST00000597301.5_1_19:14804303-14827921:+|nuORF', 'nc|ENSG00000160961|Q96JL9-3|ZNF333', 'ENSG00000160961|ENST00000292530|ZNF333'] 28366 14184 FRVKYETEL True PC9_epitope_Rep3 1183.62372370131 1183.62208490379 59.644 3 -0.040069837609948845 0.015124144015460236 0.1430108905937614 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 88989 20054 QVIPQFQTV True PC9_epitope_Rep5 1058.5760452328998 1058.57547496793 82.191 1 -0.04007301237326949 0.015124144015460236 0.1430176241606823 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 6282 4529 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 22.512 2 -0.040073954409518275 0.015124144015460236 0.14301962222870787 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 38185 4950 HDPSAVAV True PC9_epitope_Rep4 794.3922672145001 794.39116993586 25.644 2 -0.040081503092178554 0.015124144015460236 0.143035633729191 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 108176 20727 SYGDILHVI True PC9_epitope_Rep3 1015.53384606775 1015.53274993586 84.994 2 -0.04008249484934297 0.015124144015460236 0.14303773743267184 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 121477 11168 VEYGGTMTDP True PC9_epitope_Rep1 1068.44337638084 1068.4422699358602 47.843 2 -0.0400886644641536 0.015124144015460236 0.14305082480886427 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'SLC35E4-SEC14L2|2|fusion', 'SLC35E4-SEC14L2|3|fusion', 'SLC35E4-SEC14L2|1|fusion'] 106021 11979 SSVVTVPSSNF True NCI_RA007_Epitope_Rep5 1122.55570371114 1122.55460993586 52.737 2 -0.04012505131146301 0.015124144015460236 0.14312802710381647 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211893|P01859|IGHG2'] 121345 5412 VEVESRNSPE True NCI_RA007_Epitope_Rep2 1144.53603089572 1144.5349299358602 25.671 2 -0.040125935330315034 0.015124144015460236 0.14312990307950854 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 17301 13240 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 62.577 2 -0.0401477388369415 0.015143559261515196 0.14317617746441536 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 23444 9099 EVTGPVIA True H1975_Epitope_Rep2 784.43306939732 784.43252496793 39.95 1 -0.04017269283527562 0.015143559261515196 0.14322915047471171 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 97094 10541 SDGVAVLKV True PC9_epitope_Rep4 886.5123823471799 886.5118349679301 48.275 1 -0.04017421418977684 0.015143559261515196 0.14323238046831913 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 107710 6811 SVSDGIHSV True PC9_epitope_Rep2 899.4348603024702 899.43376993586 31.604 2 -0.04021856886161433 0.015143559261515196 0.14332657135575505 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 85429 12606 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45416993586 53.586 2 -0.04022050899656383 0.015143559261515196 0.14333069233674778 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 55607 20956 LAIGASFTV True PC9_epitope_Rep1 877.49091862661 877.49037496793 85.43 1 -0.04024241679718425 0.015161378383486277 0.14337723149466913 ['nc|ENSG00000104635|Q15043-3|SLC39A14', 'nc|ENSG00000104635|Q15043-2|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 121955 18169 VFTEVANLF True NCI_RA007_Epitope_Rep5 1038.53859709502 1038.53750993586 76.693 2 -0.040253857653862385 0.015161378383486277 0.1434015395205555 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 87232 14329 QPLGTLPQA True PC9_epitope_Rep4 923.5076313199098 923.50652993586 63.017 2 -0.040254738579872086 0.015161378383486277 0.14340341130984371 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 11721 11363 DHARTITVAL True PC9_epitope_Rep2 1095.60365696307 1095.60254993586 49.03 2 -0.04029841637788434 0.015161378383486277 0.14349623816613097 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 129406 13017 VRESQLLL True PC9_epitope_Rep6 956.5654805492 956.56438993586 61.65 2 -0.04034576008170178 0.015161378383486277 0.14359690117658 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'nc|ENSG00000100890|O15091-4|PRORP', 'GTF2A1-KIAA0391|1|fusion', 'nc|ENSG00000100890|O15091-3|PRORP', 'GTF2A1-KIAA0391|2|fusion', 'FAM177A1-KIAA0391|2|fusion', 'FAM177A1-KIAA0391|1|fusion'] 88540 8804 QTATTTMVY True H1975_Epitope_Rep2 1014.4691972058599 1014.46867496793 38.831 1 -0.040350151566463786 0.015161378383486277 0.1436062408079004 ['ENSG00000198218|ENST00000395443|QRICH1'] 107284 23483 SVLDGLLYV True PC9_epitope_Rep3 977.54334812229 977.54224993586 95.606 2 -0.04037733424953017 0.015161378383486277 0.14366406082323374 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 31656 9462 GEFRQGLISA True NCI_RA007_Epitope_Rep2 1076.56145779792 1076.56036993586 41.416 2 -0.040393330570138726 0.015161378383486277 0.14369809367261832 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 27003 17424 FLEPVNPRL True PC9_epitope_Rep5 1083.60767971435 1083.60658993586 72.022 2 -0.04041179818525902 0.015161378383486277 0.14373739097221838 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 66341 17957 LSGALVSFL True H1975_Epitope_Rep2 905.52221875489 905.52167496793 74.394 1 -0.040443570618800266 0.015161378383486277 0.14380501635869028 ['ENST00000487582.1_2_12:56226726-56226987:+|nuORF'] 4047 12245 AHGVSLVL True PC9_epitope_Rep6 794.46503823194 794.46394993586 58.478 2 -0.0404565985133271 0.01517919002330415 0.14383275142775198 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 2891 7456 AEVRVIAPP True NCI_RA007_Epitope_Rep3 950.5549158654998 950.55380993586 36.449 2 -0.04047074613131428 0.01517919002330415 0.14386287430178976 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 112978 19980 TLLRLLYEA True PC9_epitope_Rep4 1090.6386454894598 1090.63754993586 84.985 2 -0.04049584102163029 0.01517919002330415 0.1439163162418286 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 47588 9848 IVVNLTGR True PC9_epitope_Rep6 870.5287011176599 870.52760993586 48.356 2 -0.04051302981142863 0.01517919002330415 0.1439529290066006 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 131234 21417 VTEVELLLY True H1975_Epitope_Rep2 1077.5957776179698 1077.59468993586 88.614 2 -0.04051438772561273 0.01517919002330415 0.1439558216783649 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 39933 7604 HPIDDLQSA True PC9_epitope_Rep2 994.47197408718 994.47086993586 34.621 2 -0.04053809176617607 0.01517919002330415 0.1440063229981502 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'ENSG00000213186|ENST00000309784|TRIM59'] 64902 14233 LQEDPPVGV True PC9_epitope_Rep3 952.4865615221598 952.48546993586 59.833 2 -0.04056322224931158 0.01517919002330415 0.14405987620000285 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 57529 9439 LEDPSQLPP True H1975_Epitope_Rep1 994.49712620586 994.49602993586 41.222 2 -0.04056450810969284 0.01517919002330415 0.1440626167315468 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 138392 14803 YHGLTVPL True PC9_epitope_Rep6 898.4912529797799 898.49014993586 68.909 2 -0.04057304116414114 0.01517919002330415 0.14408080395754214 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 1742 11593 AEGPVAVVV True H1975_Epitope_Rep3 839.4752685624699 839.47472496793 49.723 1 -0.04062881497455157 0.01517919002330415 0.1441997169996995 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 96593 7658 SAGGFLGVK True NCI_RA007_Epitope_Rep3 834.4599528514999 834.45884993586 37.246 2 -0.040659157198880816 0.015198908365697492 0.14426443577461764 ['ENST00000426740.6_3_1:161514508-161514637:-|nuORF'] 70023 18303 LVMGDIPAA True PC9_epitope_Rep4 885.4629896266099 885.46188993586 78.471 2 -0.04066822278054811 0.015198908365697492 0.14428377604693451 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'ENST00000529333.5_1_1:46049729-46070604:+|nuORF'] 110391 9105 TEVLKTHGLLV True NCI_RA007_Epitope_Rep5 1208.71287305888 1208.71123490379 41.675 3 -0.040692216335596075 0.015198908365697492 0.14433497157149142 ['ENSG00000142541|ENST00000391857|RPL13A'] 141940 22354 YVGEELIYL True PC9_epitope_Rep2 1097.5644774896898 1097.5633899358602 91.474 2 -0.04070114559057394 0.015198908365697492 0.14435402717927562 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 44956 17719 IPAALPVAA True PC9_epitope_Rep2 821.50108938749 821.49998993586 73.437 2 -0.04072256297702806 0.015216706894742365 0.14439974007535142 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 33374 8047 GKWGAKIVM True NCI_RA007_Epitope_Rep4 988.5528076905199 988.55170993586 37.721 2 -0.04072370151076016 0.015216706894742365 0.1444021704108815 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant'] 104171 17412 SQFPEEILL True NCI_RA007_Epitope_Rep4 1074.55972646242 1074.5586299358602 75.397 2 -0.040726835281512046 0.015216706894742365 0.14440885995713784 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 108640 10530 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 45.491 3 -0.04072928485219189 0.015216706894742365 0.14441408910968379 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 104738 15165 SQVFKLYTA True PC9_epitope_Rep2 1055.56514619603 1055.56404993586 63.59 2 -0.04074490038388028 0.015216706894742365 0.14444742688432297 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-2|ANAPC5', 'ENST00000534976.5_1_12:121766230-121783868:-|nuORF', 'ENST00000541652.5_1_12:121773337-121785669:-|nuORF'] 74273 8264 NEINKLLAHR True PC9_epitope_Rep4 1206.6833042660999 1206.6816449037901 39.248 3 -0.04074889305124253 0.015216706894742365 0.14445595169492031 ['nc|ENSG00000149212|P58005-3|SESN3', 'ENSG00000149212|ENST00000536441|SESN3'] 115306 10870 TRHPENWTL True PC9_epitope_Rep3 1152.56760580752 1152.56596490379 46.789 3 -0.04075243776914222 0.015216706894742365 0.14446352036101365 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 4046 12160 AHGVSLVL True PC9_epitope_Rep6 794.46503823194 794.46394993586 58.13 2 -0.04078347405404228 0.015216706894742365 0.14452980014212816 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 53713 4901 KSINPDEAV True NCI_RA007_Epitope_Rep3 971.4923751785899 971.49126993586 26.269 2 -0.04079823680356239 0.015216706894742365 0.14456133392939696 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 60381 16612 LGTIHLVAV True PC9_epitope_Rep2 921.5647522732099 921.56364993586 69.142 2 -0.04080311819533124 0.015216706894742365 0.14457176176990083 ['ENST00000438671.3_1_3:45731844-45750997:+|nuORF'] 1231 8719 AEDEAAALP True H1975_Epitope_Rep3 885.4079768482899 885.40686993586 38.539 2 -0.04081372231172718 0.015230343207183016 0.14459441646261206 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 86023 8052 QHQEHFIQM True PC9_epitope_Rep4 1196.5396768075198 1196.53804490379 38.422 3 -0.040855483092896216 0.015230343207183016 0.1446836573312313 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 134449 13112 VYPPPHQVF True PC9_epitope_Rep1 1082.5549158654999 1082.55380993586 55.302 2 -0.04085720172737101 0.015230343207183016 0.14468733075676488 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 60580 15529 LHGNIITSL True PC9_epitope_Rep2 966.54983048506 966.54872993586 65.005 2 -0.04087624147997841 0.015230343207183016 0.14472803064341233 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 104626 15233 SQSSLIHLV True PC9_epitope_Rep4 982.5447451046201 982.54364993586 66.522 2 -0.040884786616389765 0.015230343207183016 0.1447462994255655 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 63333 20614 LLTEQINLYL True H1975_Epitope_Rep2 1218.6859896047 1218.6848899358602 85.385 2 -0.040887742392046386 0.015230343207183016 0.14475261898111574 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2', 'ENSG00000116793|ENST00000369604|PHTF1'] 32892 9558 GHSTAVVSL True PC9_epitope_Rep1 869.46068112749 869.45958993586 41.623 2 -0.04088922374997498 0.015230343207183016 0.1447557862469396 ['ENSG00000156463|ENST00000359120|SH3RF2'] 38810 14275 HGYLGIVEL True NCI_RA007_Epitope_Rep4 999.5389314481899 999.53782993586 62.202 2 -0.040901187285996586 0.015230343207183016 0.14478136696166055 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555371.1_1_14:35871898-35872434:-|nuORF'] 87484 16667 QQDYFPKAL True PC9_epitope_Rep1 1108.5553097883198 1108.5542099358602 68.938 2 -0.040910237655391715 0.015230343207183016 0.144800720666906 ['ENSG00000100401|ENST00000356244|RANGAP1'] 114702 14549 TQIDHYVGI True PC9_epitope_Rep2 1044.52400966004 1044.52347496793 61.235 1 -0.04091673926677545 0.015230343207183016 0.14481462505579176 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 110790 14728 TGISDVFAK True PC9_epitope_Rep3 936.4916469026 936.49054993586 61.789 2 -0.04091827429013104 0.015230343207183016 0.14481790799605793 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 98692 10947 SGFEGMFTK True NCI_RA007_Epitope_Rep5 1002.4480678384599 1002.44696993586 48.746 2 -0.040949637568141274 0.015230343207183016 0.14488499515646933 ['ENSG00000153201|ENST00000283195|RANBP2'] 76362 9266 NPYYGGESA True PC9_epitope_Rep1 956.3875757568799 956.38646993586 40.494 2 -0.04095734237336254 0.015230343207183016 0.14490147916015633 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 118128 16869 TYIKFINLF True NCI_RA007_Epitope_Rep3 1157.6484818971699 1157.64738993586 74.228 2 -0.040968963839107385 0.015230343207183016 0.14492634499449014 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50303271-50309027:+|nuORF'] 110981 5990 THAPATLEA True PC9_epitope_Rep3 909.45559574705 909.45448993586 28.094 2 -0.04100587096355519 0.015230343207183016 0.1450053319729364 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 13312 7759 DLTREGGSIP True NCI_RA007_Epitope_Rep3 1043.5247379360299 1043.52364993586 37.641 2 -0.04101609427197258 0.015230343207183016 0.14502721648764955 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 139586 22630 YLVYILNEL True PC9_epitope_Rep4 1138.6274120994199 1138.62687496793 95.275 1 -0.04103088521145713 0.015230343207183016 0.14505888257251764 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 136941 11087 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.3808149679301 47.534 1 -0.04103827723327416 0.015230343207183016 0.14507470995081764 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 48884 4696 KEAVTTIAA True H1975_Epitope_Rep2 902.5072969667399 902.50618993586 23.157 2 -0.041075205957314405 0.015230343207183016 0.14515379678603513 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 47758 21832 IYEPNFIFF True NCI_RA007_Epitope_Rep1 1188.5855472874398 1188.5844499358602 89.376 2 -0.041081056453529996 0.015230343207183016 0.1451663288745965 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 5674 5577 APAFKYFIRRD True NCI_RA007_Epitope_Rep3 1382.7459045226599 1382.74480993586 28.93 2 -0.04109130705647817 0.015230343207183016 0.14518828796547134 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 115434 11240 TRMGIGDEAV True PC9_epitope_Rep1 1047.5018943164698 1047.5007899358602 48.114 2 -0.04113180561566152 0.015230343207183016 0.145275066491377 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000494718.5_1_X:51643260-51645023:+|nuORF'] 99318 15089 SHSLSELL True PC9_epitope_Rep4 884.46034677432 884.45924993586 65.973 2 -0.041164606084842896 0.015230343207183016 0.1453453750726305 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 137866 13448 YESSTASALVA True PC9_epitope_Rep5 1097.52406922969 1097.5229699358601 56.744 2 -0.04120037201470208 0.015244925348095958 0.14542206587569007 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 106883 17506 SVDETLRLVQA True PC9_epitope_Rep5 1229.66156576201 1229.6604699358602 72.339 2 -0.041205161021110284 0.015244925348095958 0.14543233669788308 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF', 'ENSG00000123131|ENST00000379341|PRDX4'] 27253 20976 FLPPDAFIHV True PC9_epitope_Rep2 1154.61243074162 1154.61132993586 86.134 2 -0.0412481009242069 0.015244925348095958 0.14552444994165312 ['ENSG00000130383|ENST00000588525|FUT5', 'ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 124960 8950 VHSTNVLL True PC9_epitope_Rep4 881.49706663621 881.49596993586 41.97 2 -0.04125126911034792 0.015244925348095958 0.14553124775866383 ['BACH1|p.P308Lfs*8|1|0.22|ENSG00000156273|chr21:29326746-29326746|C/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 1738 11455 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 49.116 1 -0.041253201694751454 0.015244925348095958 0.14553539451067596 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 137860 9741 YESSTASALVA True NCI_RA007_Epitope_Rep1 1097.52406922969 1097.52347496793 41.892 1 -0.041262816397436564 0.015244925348095958 0.14555602596926948 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 75725 14577 NLLARLCL True PC9_epitope_Rep1 914.5371576263799 914.53606993586 60.894 2 -0.041326936537704397 0.015244925348095958 0.14569366601846684 ['ENST00000374279.3_1_9:114696562-114696673:+|nuORF'] 37073 21540 GVPQALFGV True PC9_epitope_Rep1 886.4912529797799 886.49014993586 87.677 2 -0.04134450888192994 0.015244925348095958 0.14573140178181646 ['ENSG00000010292|ENST00000315579|NCAPD2'] 663 10202 AATKIINEV True PC9_epitope_Rep5 957.54949613189 957.54838993586 44.231 2 -0.04135249537081858 0.015244925348095958 0.14574855452031404 ['ENST00000470900.1_1_3:51423580-51426517:+|nuORF', 'ENSG00000145050|ENST00000528157|MANF', 'ENST00000482262.1_1_3:51425158-51426517:+|nuORF', 'ENST00000446668.5_1_3:51424348-51426517:+|nuORF'] 118035 11239 TYETKTALL True PC9_epitope_Rep2 1038.5597264624198 1038.5586299358602 48.557 2 -0.041354238744160075 0.015244925348095958 0.1457522989750325 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 122254 7126 VGARIYHTI True PC9_epitope_Rep4 1028.5767139392399 1028.57560993586 34.683 2 -0.041363625335786455 0.015244925348095958 0.14577246079245934 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant', 'ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 101607 15332 SLLQPLNV True NCI_RA007_Epitope_Rep4 882.51746772762 882.51636993586 66.633 2 -0.041372557974992244 0.015244925348095958 0.1457916492621904 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT3|p.V305*|1|0.36|ENSG00000186442|chr12:52793177-52793177|C/-|frameshift_variant', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546'] 31925 9781 GEM[Oxidation]EPPALP True H1975_Epitope_Rep3 955.4320838015898 955.43098993586 42.646 2 -0.041388328646372215 0.015244925348095958 0.1458255307941846 ['ENSG00000100726|ENST00000262319|TELO2'] 30421 8716 GAERITDVAL True NCI_RA007_Epitope_Rep3 1043.56112344475 1043.56002993586 41.37 2 -0.0413949759830574 0.015244925348095958 0.14583981341798458 ['ENST00000473604.2_1_9:132580793-132585603:-|nuORF', 'ENSG00000136827|ENST00000351698|TOR1A'] 281 9869 AAGPVGMAA True PC9_epitope_Rep1 743.3636099385099 743.3630649679301 42.82 1 -0.0413977989724166 0.015244925348095958 0.14584587923927864 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1'] 46117 14919 ISIPAVQKV True PC9_epitope_Rep5 953.5909670210499 953.58986993586 62.39 2 -0.04140968213969379 0.015244925348095958 0.14587141470087125 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 118148 23151 TYIPPLLVAF True PC9_epitope_Rep4 1132.6532329244399 1132.65212993586 97.271 2 -0.04141836848862058 0.015244925348095958 0.14589008246536952 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 130940 7726 VTDIYNHRFHR True H1975_Epitope_Rep3 1456.7323797168401 1456.73074490379 34.701 3 -0.04143748849920628 0.015244925348095958 0.1459311786991325 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15'] 6280 4716 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 23.01 2 -0.041445657703529634 0.015244925348095958 0.14594873978647274 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 29920 12026 FVYDEPGHAV True PC9_epitope_Rep2 1132.5189242795998 1132.5178299358602 51.576 2 -0.04147999919965215 0.015244925348095958 0.14602257793563392 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 25728 15305 FESPLTLAA True H1975_Epitope_Rep2 947.4963979298699 947.4958449679301 64.029 1 -0.04149964942907 0.015263974504130499 0.14606483929150163 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant', 'nc|ENSG00000131503|Q8IWZ3-5|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-3|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-2|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 78544 10079 NYQGHFHLF True NCI_RA007_Epitope_Rep3 1161.5355774032498 1161.5344899358602 46.739 2 -0.041502268256201263 0.015263974504130499 0.1460704721615307 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 53932 5694 KTQNFLIQK True NCI_RA007_Epitope_Rep4 1118.64479349906 1118.64368993586 28.514 2 -0.04150978243645083 0.015263974504130499 0.1460866353090483 ['ENSG00000142867|ENST00000648566|BCL10'] 102985 16966 SPFGSITSA True PC9_epitope_Rep3 865.4181476091701 865.4175949679301 70.421 1 -0.04151822563134093 0.015263974504130499 0.14610479819625885 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 63675 22315 LMSLIINTF True PC9_epitope_Rep4 1050.57835373202 1050.57777496793 94.074 1 -0.041531040455773924 0.015263974504130499 0.14613236812740452 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 49224 7027 KENPYEDIP True H1975_Epitope_Rep2 1103.51350454599 1103.5124099358602 31.954 2 -0.041537708867406584 0.015263974504130499 0.14614671597032367 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C', 'ENST00000481894.1_1_1:115138166-115167938:-|nuORF'] 62073 20186 LLDVPTAAV True PC9_epitope_Rep1 897.5171333744499 897.51602993586 82.476 2 -0.04154912980298361 0.015283339273360029 0.14617129157069045 ['ENSG00000216490|ENST00000407280|IFI30'] 45524 10585 IQPSSFRSV True PC9_epitope_Rep1 1019.53999407735 1019.53888993586 45.608 2 -0.041574752127427346 0.015283339273360029 0.14622643569957872 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B'] 2144 2750 AELPSRAP True H1975_Epitope_Rep2 839.45011644379 839.44900993586 14.606 2 -0.04159796590679304 0.015283339273360029 0.14627640805405734 ['ENST00000403892.7_1_22:37414793-37415237:-|nuORF'] 28064 19865 FQSSAVMAL True PC9_epitope_Rep3 952.4688032830398 952.4682549679301 81.647 1 -0.04161651422833729 0.015283339273360029 0.1463163451803396 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 16754 7329 EETIEKMQE True PC9_epitope_Rep5 1135.5067049133897 1135.50560993586 33.15 2 -0.04161747567539265 0.015283339273360029 0.14631841550656588 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000443413.1_1_X:91931520-91931646:-|nuORF', 'ENST00000584441.5_2_17:8280884-8281016:-|nuORF', 'ENST00000495104.1_1_4:165841772-165841955:-|nuORF', 'ENST00000584906.5_1_17:8280884-8283916:-|nuORF'] 114957 12944 TQVGTVTSL True PC9_epitope_Rep4 904.48656152216 904.48546993586 57.676 2 -0.041620582070362074 0.015295325497098078 0.14632510477581545 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000482301.1_1_3:49714104-49717481:+|nuORF'] 55303 7966 LAEAALELREE True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 35.591 2 -0.04162180449622248 0.015295325497098078 0.14632773718668624 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 114374 18218 TPSIPVLTA True PC9_epitope_Rep6 897.51713337445 897.51602993586 82.718 2 -0.04162221168073823 0.015295325497098078 0.1463286140377708 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 6456 13160 APSGNFVAC True PC9_epitope_Rep1 864.37998827864 864.37888993586 55.484 2 -0.04165147003873689 0.015295325497098078 0.14639162951017617 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 40702 6008 HRSDALQL True PC9_epitope_Rep2 938.4933782380999 938.49228993586 28.499 2 -0.04167101080987744 0.015295325497098078 0.1464337256231139 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 140108 8215 YQNQEIHNL True PC9_epitope_Rep2 1157.5465360097699 1157.54542993586 36.956 2 -0.041681862495668846 0.015295325497098078 0.1464571065474284 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 135953 18461 WQDYIYKEV True PC9_epitope_Rep5 1242.5920892198599 1242.59098993586 76.031 2 -0.04171975989022337 0.015295325497098078 0.1465387792117993 ['ENSG00000152147|ENST00000281950|GEMIN6'] 4687 13030 ALASHLIEA True PC9_epitope_Rep1 923.5076313199099 923.50652993586 54.989 2 -0.04174341014722105 0.015295325497098078 0.14658976311965882 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 49277 8561 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 37.883 2 -0.041743933025344064 0.015295325497098078 0.14659089044359966 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 119341 4219 VAPAPAVVK True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 22.767 2 -0.041758811960192946 0.015295325497098078 0.146622971790515 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF'] 34373 17079 GPFSQFIKA True PC9_epitope_Rep6 993.5283667644898 993.52726993586 78.263 2 -0.0417781731256051 0.015295325497098078 0.1466647244817092 ['ENSG00000075420|ENST00000415807|FNDC3B'] 38579 5231 HEVQRLTVT True H1975_Epitope_Rep1 1081.5880068989297 1081.5869099358601 25.183 2 -0.04178585955955854 0.015295325497098078 0.14668130258815432 ['nc|ENSG00000062038|P22223-2|CDH3', 'ENST00000542274.5_1_16:68679206-68732300:+|nuORF', 'ENSG00000062038|ENST00000264012|CDH3'] 82450 5868 PPPQPPPPP True NCI_RA007_Epitope_Rep3 922.4912529797798 922.49014993586 30.06 2 -0.04178693800174872 0.015295325497098078 0.14668362867206902 ['ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000203867|ENST00000369519|RBM20'] 55573 8152 LAHAAFSAA True PC9_epitope_Rep3 857.43955176009 857.43844993586 36.335 2 -0.04179738432954804 0.015295325497098078 0.14670616153949034 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 8564 14350 ATVLQAVSA True PC9_epitope_Rep4 858.4810822188999 858.47998993586 63.103 2 -0.041820063060609466 0.015295325497098078 0.14675508773080156 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 102462 18582 SLVAVELEKV True PC9_epitope_Rep2 1085.63322575585 1085.6321299358601 76.828 2 -0.041839949541277226 0.015295325497098078 0.14679799889778322 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 118545 15588 TYQLGFHSI True PC9_epitope_Rep6 1064.52909504048 1064.5279899358602 72.168 2 -0.041847487009456376 0.015295325497098078 0.1468142654566513 ['ENSG00000142507|ENST00000270586|PSMB6'] 139434 21096 YLPPGFLSA True PC9_epitope_Rep2 963.50656869075 963.50546993586 86.605 2 -0.041849481256248176 0.015295325497098078 0.14681856942618815 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 1867 12041 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.48512993586 51.477 2 -0.041858429414741 0.015295325497098078 0.1468378823050206 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 21588 4102 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 22.659 2 -0.04186295358769886 0.015295325497098078 0.14684764750044058 ['ENSG00000180921|ENST00000388913|FAM83H'] 81784 18228 PLPPLPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 75.432 2 -0.04187549545605818 0.015295325497098078 0.14687472072211125 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 103864 6365 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 33.062 2 -0.041899438298749515 0.015295325497098078 0.14692641354919286 ['ENSG00000105701|ENST00000608443|FKBP8', 'nc|ENSG00000105701|Q14318|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 1524 4564 AEENLDRRVP True H1975_Epitope_Rep3 1197.61019889549 1197.60856490379 22.675 3 -0.041899556183748 0.015295325497098078 0.146926668093742 ['ENSG00000115159|ENST00000438166|GPD2', 'nc|ENSG00000115159|P43304-2|GPD2', 'ENST00000464846.5_1_2:157435526-157439427:+|nuORF'] 126009 19900 VLDSEGYLLFY True H1975_Epitope_Rep2 1317.6492697428098 1317.64867496793 82.529 1 -0.04192660330957661 0.015295325497098078 0.14698507760869997 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 62636 21710 LLLENSGIL True PC9_epitope_Rep1 970.5698972232999 970.56880993586 88.34 2 -0.04194698909666421 0.015295325497098078 0.14702911178273723 ['ENSG00000172244|ENST00000306862|C5orf34'] 98956 7718 SHAQTVVL True PC9_epitope_Rep1 853.46576650793 853.46466993586 34.506 2 -0.04195533533286652 0.015295325497098078 0.14704714252224194 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 98206 6407 SETKIFTA True NCI_RA007_Epitope_Rep3 895.4650978015899 895.46400993586 32.207 2 -0.04195889425463745 0.015295325497098078 0.1470548314605115 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.L529Hfs*14|1|0.03|ENSG00000143569|chr1:154251571-154251587|GTCCTTTCTGATTATGA/-|frameshift_variant', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 99311 14905 SHSEWVSCV True PC9_epitope_Rep5 1032.43348040348 1032.43238993586 62.336 2 -0.04198501635210478 0.015295325497098078 0.14711127554855033 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000515417.5_1_5:180666387-180668514:-|nuORF'] 75575 5064 NLDDNAQRY True H1975_Epitope_Rep2 1107.49450043691 1107.4934099358602 24.561 2 -0.041993447357511156 0.01531306952678216 0.14712949614167944 ['ENSG00000198113|ENST00000357503|TOR4A'] 91760 10806 RKFLETVEL True NCI_RA007_Epitope_Rep4 1133.6444591458899 1133.6433699358602 48.412 2 -0.0419936675649496 0.01531306952678216 0.14712997206099873 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 75905 11052 NLQTVNVDEN True PC9_epitope_Rep3 1144.53603089572 1144.5349299358602 47.507 2 -0.0419947560692437 0.01531306952678216 0.14713232458601624 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 29543 7455 FVHPGAATV True PC9_epitope_Rep6 897.4708518883699 897.46974993586 37.911 2 -0.04203049002357825 0.01531306952678216 0.14720956821486741 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 87571 8373 QQLGKVVQV True PC9_epitope_Rep6 997.5920296502098 997.59092993586 41.864 2 -0.04203991992601849 0.01531306952678216 0.14722995664604713 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 134061 7643 VYKDHQTITI True PC9_epitope_Rep4 1216.6451874218799 1216.6435349037902 36.779 3 -0.042048904350737534 0.01531306952678216 0.14724938364062343 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 69280 18550 LTTNIMEIL True NCI_RA007_Epitope_Rep4 1046.56818297114 1046.5670899358602 80.261 2 -0.04206169256851506 0.01531306952678216 0.14727703848141824 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 64590 8849 LPSQPPPAA True PC9_epitope_Rep1 876.4705175351999 876.46942993586 38.879 2 -0.04206264971032405 0.01531306952678216 0.1472791084622985 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD'] 107366 8678 SVLIQKQIFK True NCI_RA007_Epitope_Rep4 1202.7386938838997 1202.7370349037901 40.168 3 -0.04206891684627963 0.01531306952678216 0.1472926626768408 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000528833.1_1_11:9431619-9435997:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 114513 11991 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 50.986 2 -0.04207377459135049 0.01531306952678216 0.14730316930478313 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 30007 21361 FYAELYHII True PC9_epitope_Rep1 1167.59644632431 1167.5953499358602 86.997 2 -0.042095313089299896 0.015332090568250844 0.14734976003842762 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000559005.2_1_14:24612620-24612898:-|nuORF'] 102442 21347 SLTSLSLSV True PC9_epitope_Rep3 905.5069626135701 905.50586993586 87.408 2 -0.042113854636678445 0.015332090568250844 0.1473898757380677 ['ENST00000467638.1_1_7:139757417-139762332:-|nuORF'] 37083 20666 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49070496793 87.65 1 -0.04211405745139781 0.015332090568250844 0.1473903145791389 ['ENSG00000010292|ENST00000315579|NCAPD2'] 17466 10172 EHFDASHVAL True PC9_epitope_Rep6 1124.5250722892 1124.52343490379 49.757 3 -0.04212641856773669 0.015332090568250844 0.1474170626149556 ['ENSG00000164062|ENST00000296456|APEH'] 103052 7872 SPGADAELP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 35.226 2 -0.04214090754463924 0.015332090568250844 0.14744841917042978 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 5637 14102 ANVTVTVLS True PC9_epitope_Rep3 902.50729696674 902.5067449679301 59.328 1 -0.042171168465914344 0.015332090568250844 0.1475139230166117 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 117986 9278 TYDKGYQF True PC9_epitope_Rep6 1020.45526139388 1020.45416993586 45.844 2 -0.04219328536688516 0.015349820953657362 0.1475618101625602 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 28447 4372 FSDHHENKYL True H1975_Epitope_Rep3 1288.58364979448 1288.5820049037902 21.936 3 -0.04219929336243543 0.015349820953657362 0.14757482034389255 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 42026 12706 IDHDQVLV True PC9_epitope_Rep6 937.48689587533 937.48578993586 60.352 2 -0.04222541995941088 0.015349820953657362 0.14763140570214148 ['nc|ENSG00000159023|P11171-4|EPB41', 'nc|ENSG00000159023|P11171-6|EPB41', 'nc|ENSG00000159023|P11171-3|EPB41', 'nc|ENSG00000159023|P11171-5|EPB41', 'nc|ENSG00000159023|P11171-2|EPB41', 'ENSG00000159023|ENST00000343067|EPB41'] 131909 5895 VTRQDYTY True PC9_epitope_Rep2 1044.4876241513198 1044.48652993586 28.069 2 -0.04223256530414669 0.015349820953657362 0.1476468836815026 ['ENSG00000005059|ENST00000394650|MCUB'] 46145 22308 ISLDILSSVG True PC9_epitope_Rep5 1002.55972646242 1002.55862993586 90.815 2 -0.0422532982819993 0.015349820953657362 0.14769180073709243 ['GUCY2F|p.M956I|1|0.15|ENSG00000101890|chrX:109388577-109388577|C/G|missense_variant'] 31896 10011 GELRSYLV True H1975_Epitope_Rep2 935.5076313199098 935.50652993586 43.498 2 -0.042302671076897544 0.015349820953657362 0.14779880089734904 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 57556 6723 LEDRPSNLP True H1975_Epitope_Rep2 1039.52982331647 1039.5287299358602 30.774 2 -0.042314982636924285 0.015349820953657362 0.14782549032156422 ['ENSG00000108239|ENST00000225235|TBC1D12'] 62969 14419 LLPHVVPGTT True PC9_epitope_Rep5 1032.59678067748 1032.59568993586 60.463 2 -0.04231847301730003 0.015349820953657362 0.14783305746591135 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 110975 6022 THAPATLEA True PC9_epitope_Rep1 909.45559574705 909.45448993586 27.977 2 -0.042359183128503626 0.015349820953657362 0.14792133582222147 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 90149 6739 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 30.876 2 -0.04237366722948387 0.015349820953657362 0.14795275242396447 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 43573 4901 IGSGC[Carbamidomethyl]NLDSAR True NCI_RA007_Epitope_Rep1 1148.5244209456298 1148.5233299358601 23.143 2 -0.04252399769151602 0.015390091712383265 0.1482790846581377 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 43224 17263 IFKPPDPDNTF True PC9_epitope_Rep2 1289.62920300457 1289.62810993586 71.662 2 -0.04254866702734634 0.015390091712383265 0.1483326812003627 ['ENSG00000165943|ENST00000298894|MOAP1'] 17405 7400 EHDPRVITV True PC9_epitope_Rep4 1064.56145779792 1064.56036993586 35.81 2 -0.042559961078414525 0.015390091712383265 0.14835722288108655 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 142406 18961 YYEYNHDLF True PC9_epitope_Rep3 1262.5244035828598 1262.5233099358602 78.158 2 -0.04256693720979252 0.015390091712383265 0.1483723831680974 ['ENSG00000151748|ENST00000324679|SAV1'] 8640 7965 AVADTVYRA True PC9_epitope_Rep5 964.4977949122 964.49668993586 35.578 2 -0.042589701011100475 0.015390091712383265 0.14842185975822686 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 100644 21356 SLDGIIVLA True PC9_epitope_Rep4 899.53278343859 899.5322349679301 90.314 1 -0.042631490341866744 0.01540586930129359 0.1485127161262081 ['ENSG00000171180|ENST00000641868|OR2M4'] 31524 5932 GEDIRKQLP True H1975_Epitope_Rep3 1054.5771078620598 1054.5760099358602 27.826 2 -0.042656433058503536 0.01540586930129359 0.14856696281030152 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7674005-7689702:+|nuORF'] 8574 15694 ATVPGLLKV True PC9_epitope_Rep4 896.5695033004799 896.56840993586 68.292 2 -0.042665960118926885 0.01540586930129359 0.14858768618094875 ['ENSG00000179820|ENST00000391770|MYADM'] 105148 16334 SRFPEALRL True PC9_epitope_Rep3 1087.61382772395 1087.6127299358602 67.964 2 -0.04268336367079006 0.01540586930129359 0.14862554749074894 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 39640 18665 HLPEELAEL True PC9_epitope_Rep2 1049.53932537101 1049.53822993586 77.16 2 -0.04268701979721124 0.01540586930129359 0.14863350217493357 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 82398 12314 PPLPPPPPP True PC9_epitope_Rep3 907.51673945163 907.51564993586 52.389 2 -0.04268919749917599 0.01540586930129359 0.14863824036379125 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'ENST00000549137.1_1_12:50039600-50046016:-|nuORF', 'FMNL3|p.P522S|1|0.35|ENSG00000161791|chr12:49651972-49651972|G/A|missense_variant', 'ENST00000373055.5_1_1:38174529-38174823:+|nuORF', 'ENST00000478808.2_1_12:109490357-109491595:-|nuORF', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000184083|ENST00000375180|FAM120C', 'nc|ENSG00000184083|Q9NX05-2|FAM120C', 'ENSG00000135144|ENST00000548759|DTX1', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000120645|ENST00000538872|IQSEC3', 'nc|ENSG00000161791|Q8IVF7-2|FMNL3', 'ENSG00000161791|ENST00000335154|FMNL3', 'nc|ENSG00000161791|Q8IVF7|FMNL3', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000011114|ENST00000334746|BTBD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 24174 7157 EYQKVGQSF True PC9_epitope_Rep6 1084.5189242795998 1084.5178299358602 36.607 2 -0.04269388230019333 0.01540586930129359 0.14864843377180786 ['nc|ENSG00000178996|Q96RF0-3|SNX18', 'ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 117719 14857 TVVAQLKQL True PC9_epitope_Rep5 998.6124307416198 998.61132993586 62.148 2 -0.04271456802801689 0.01540586930129359 0.14869344823294514 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 126 20086 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.50506993586 83.244 2 -0.04271945902178958 0.01540586930129359 0.14870409289243733 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 109855 10828 TEEPEIYEP True H1975_Epitope_Rep2 1105.48153571137 1105.48042993586 46.68 2 -0.04272304897153428 0.01540586930129359 0.1487119063047482 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 22525 17406 ETHFGFETV True PC9_epitope_Rep3 1065.47672511445 1065.47562993586 72.121 2 -0.04273826637374613 0.01540586930129359 0.14874502949533808 ['ENSG00000110871|ENST00000288532|COQ5', 'ENST00000547736.1_1_12:120964341-120966944:-|nuORF', 'ENST00000547448.1_1_12:120965158-120966944:-|nuORF'] 130448 19153 VSNPVDILTYV True H1975_Epitope_Rep1 1218.64960409598 1218.6485099358601 79.818 2 -0.0427431049961323 0.01540586930129359 0.14875556257206266 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 39973 9592 HPLLGVSA True PC9_epitope_Rep4 792.4493881678001 792.4488349679301 44.521 1 -0.04275503305086701 0.01540586930129359 0.1487815305505583 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 36084 21478 GVAETLVLV True PC9_epitope_Rep1 899.5327834385898 899.53168993586 87.456 2 -0.042767830397031935 0.01540586930129359 0.14880939433157905 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 103051 7776 SPGADAELP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 34.857 2 -0.042784327856140544 0.01540586930129359 0.14884531946019083 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 106510 18344 STLPDVTEV True PC9_epitope_Rep3 959.48114178855 959.48004993586 75.771 2 -0.04279662563630965 0.01540586930129359 0.14887210300680578 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 38104 5724 HAYDGKDYI True NCI_RA007_Epitope_Rep5 1080.48762415132 1080.48652993586 28.705 2 -0.04280112791615484 0.015423249973841164 0.14888190939086446 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'nc|ENSG00000206341|P01893|HLA-H'] 49107 5850 KEIHVNIEA True H1975_Epitope_Rep3 1051.56620882519 1051.5651099358602 27.515 2 -0.04283653284744442 0.015423249973841164 0.1489590394067783 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 93488 8681 RQKAVSLFL True NCI_RA007_Epitope_Rep3 1060.6393141958 1060.63820993586 41.226 2 -0.04284002418463738 0.015423249973841164 0.14896664674257543 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 64360 22256 LPLLIAPALAA True PC9_epitope_Rep4 1061.68486740589 1061.68376993586 93.847 2 -0.04285840819019727 0.015423249973841164 0.149006708182305 ['ENSG00000168140|ENST00000304735|VASN'] 22421 18571 ETEPVFWYY True H1975_Epitope_Rep2 1232.5389910178399 1232.5378899358602 77.067 2 -0.042895923678830127 0.015423249973841164 0.14908848186642168 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 6176 9773 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 42.546 2 -0.0429053138170312 0.015423249973841164 0.14910895445266031 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 102960 9021 SPFAEGTSA True PC9_epitope_Rep2 865.38176210045 865.3806699358599 40.049 2 -0.042943916985777535 0.015423249973841164 0.14919313731520245 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 29643 15724 FVIRNIVEA True PC9_epitope_Rep6 1059.6076797143498 1059.60658993586 72.706 2 -0.04294848674241797 0.015423249973841164 0.14920310475793866 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 69737 11815 LVEVQLLESK True NCI_RA007_Epitope_Rep1 1156.6703395405598 1156.66924993586 49.937 2 -0.042992955323156244 0.015423249973841164 0.1493001213647761 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 77594 17348 NTDSLDWALY True H1975_Epitope_Rep3 1196.5349682665599 1196.53437496793 72.382 1 -0.042994880821549605 0.015423249973841164 0.1493043231376895 ['ENSG00000108561|ENST00000225698|C1QBP'] 77837 19887 NVDTSWPVL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 81.734 2 -0.04299673819734532 0.015423249973841164 0.14930837632873045 ['ENST00000275364.7_1_7:2769482-2769623:-|nuORF'] 91984 9195 RKQMVIDVL True NCI_RA007_Epitope_Rep5 1100.6375999436398 1100.6365099358602 42.019 2 -0.04305697857285282 0.015443207499790742 0.14943987283783963 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 6504 9138 APTAEGLAA True PC9_epitope_Rep2 799.4075829254699 799.40703496793 40.491 1 -0.043059885739853684 0.015443207499790742 0.14944622070656063 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 9000 13742 AVGPIVQL True H1975_Epitope_Rep2 795.48543932335 795.48489496793 58.005 1 -0.043067750288497623 0.015443207499790742 0.14946339402287978 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.D74Y|1|0.21|ENSG00000112531|chr6:163455356-163455356|G/T|missense_variant'] 74985 10574 NHQGATPLVL True PC9_epitope_Rep6 1048.56654317836 1048.5654499358602 51.481 2 -0.0430699230762326 0.01546186839627576 0.149468138829845 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 68153 21884 LTDQTLIYL True PC9_epitope_Rep5 1078.5910265906998 1078.59047496793 89.215 1 -0.04311857509253928 0.01546186839627576 0.14957440812644854 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 131632 7990 VTLSWKPVQK True NCI_RA007_Epitope_Rep4 1184.6917436914798 1184.69008490379 37.498 3 -0.043121999093113664 0.01546186839627576 0.14958188894428331 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 14980 21112 DYGNGFGGF True PC9_epitope_Rep5 932.3664463894798 932.3658949679301 86.273 1 -0.04312328811075968 0.01546186839627576 0.14958470527668666 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 34789 16658 GQGPVLFL True H1975_Epitope_Rep2 829.46978925921 829.4692449679301 69.309 1 -0.04314896135500314 0.01546186839627576 0.14964080514656167 ['nc|ENSG00000173928|Q6NVH7|SWSAP1', 'ENSG00000173928|ENST00000674460|SWSAP1'] 55570 7977 LAHAAFSAA True PC9_epitope_Rep1 857.43955176009 857.43844993586 35.506 2 -0.043174191843836605 0.01546186839627576 0.14969595096268384 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 83141 11262 PSRAQLPSL True PC9_epitope_Rep5 967.5450794577899 967.5439899358599 48.31 2 -0.043190348632048674 0.01546186839627576 0.14973127155162244 ['ENST00000389851.8_2_4:1341218-1341545:+|nuORF'] 68275 10731 LTEEALAESA True H1975_Epitope_Rep1 1032.4975201286798 1032.4969749679299 46.239 1 -0.0432216503978588 0.015480847681010858 0.14979971633205935 ['ENSG00000047662|ENST00000265018|FAM184B'] 70609 26467 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 110.47 3 -0.04325993450453181 0.015480847681010858 0.14988345663531227 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 104759 19907 SQVQQLISL True PC9_epitope_Rep4 1014.5709598524599 1014.56986993586 84.707 2 -0.04327633842845623 0.015480847681010858 0.149919346952398 ['ENSG00000021776|ENST00000156471|AQR', 'AQR|p.R163G|1|0.07|ENSG00000021776|chr15:34942065-34942065|G/C|missense_variant'] 28003 21975 FQLPIRFNL True PC9_epitope_Rep3 1146.65496425994 1146.65386993586 89.828 2 -0.04329816996628658 0.015480847681010858 0.14996712113194305 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3', 'ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000509410.1_1_5:33461160-33466106:+|nuORF'] 7123 7370 AQVRGGYVL True NCI_RA007_Epitope_Rep5 961.5345147740899 961.53340993586 35.029 2 -0.043324669370113644 0.015480847681010858 0.15002512344351268 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 3526 14869 AGLQFPVGR True PC9_epitope_Rep1 943.5239500903898 943.5234049679301 62.013 1 -0.04332743421827345 0.015480847681010858 0.1500311760326858 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 2203 14982 AEMEEPPLLP True H1975_Epitope_Rep2 1124.5423621461198 1124.54126993586 62.779 2 -0.04340970797820811 0.015499173795728838 0.1502113564642636 ['ENSG00000087053|ENST00000346299|MTMR2', 'ENST00000485740.5_1_11:95598759-95621397:-|nuORF'] 62987 15992 LLPNHSYVF True PC9_epitope_Rep4 1088.5654805492 1088.5643899358602 69.446 2 -0.04342748397597925 0.015499173795728838 0.15025030468858233 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 70119 10381 LVPEQIGK True PC9_epitope_Rep2 882.5174677276199 882.51636993586 45.254 2 -0.04346808677456717 0.015499173795728838 0.1503392925165948 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 35098 7206 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 35.022 2 -0.043475370049091265 0.015499173795728838 0.15035525867783964 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 85732 8622 QHAVGIVV True PC9_epitope_Rep6 821.47593726881 821.47484993586 42.981 2 -0.04351223394897908 0.015499173795728838 0.150436087552728 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 129280 14062 VQVPHHLLSSV True PC9_epitope_Rep5 1214.6771562565002 1214.67550490379 59.103 3 -0.0435609494051551 0.015499173795728838 0.15054294608218222 ['ENST00000441339.2_11:69061685-69061946:+|nuORF'] 9534 7542 AVYEGHVSC True PC9_epitope_Rep1 963.4120166829099 963.41090993586 33.828 2 -0.04356957617060889 0.015499173795728838 0.1505618742715703 ['ENSG00000105887|ENST00000393085|MTPN'] 6028 16697 APLAAAALPA True PC9_epitope_Rep5 864.5069030439199 864.50580993586 69.229 2 -0.04357460686757937 0.015499173795728838 0.15057291296054529 ['ENST00000366600.7_1_1:235658098-235667703:-|nuORF'] 128332 6395 VPQEAQKIQA True PC9_epitope_Rep3 1110.6033226098998 1110.6022299358601 29.623 2 -0.04359316076124219 0.015517818303496737 0.15061362971873132 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN'] 5676 14335 APAGGFQNIA True PC9_epitope_Rep3 944.4715801643599 944.47048993586 60.226 2 -0.043623448870565795 0.015517818303496737 0.15068011282696825 ['ENSG00000037897|ENST00000324871|METTL1'] 3834 16367 AGVNKSYLYL True PC9_epitope_Rep3 1126.60225998074 1126.60116993586 68.093 2 -0.04362621352058916 0.015517818303496737 0.15068618225355057 ['ENST00000522364.5_1_8:80963727-80992703:-|nuORF', 'nc|ENSG00000076554|P55327|TPD52', 'nc|ENSG00000076554|P55327-7|TPD52', 'nc|ENSG00000076554|P55327-5|TPD52', 'nc|ENSG00000076554|P55327-6|TPD52', 'nc|ENSG00000076554|P55327-8|TPD52'] 40634 6391 HRLVESTSL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 31.673 2 -0.043651927860703064 0.015517818303496737 0.1507426423694576 ['ENSG00000076242|ENST00000231790|MLH1', 'nc|ENSG00000076242|P40692-2|MLH1', 'nc|ENSG00000076242|P40692-3|MLH1'] 95787 11562 RYIFAKNLF True NCI_RA007_Epitope_Rep3 1170.6549642599398 1170.65386993586 52.61 2 -0.04367438249496983 0.015517818303496737 0.15079195656320904 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 138700 15062 YINGGELFY True H1975_Epitope_Rep1 1074.5022115862998 1074.5016749679298 63.186 1 -0.04369547480887554 0.015517818303496737 0.15083828846961633 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF'] 35062 8435 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42828993586 39.909 2 -0.04370312920738367 0.015517818303496737 0.15085510461327303 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 133604 21191 VYADGIFDLF True NCI_RA007_Epitope_Rep3 1158.55972646242 1158.5586299358602 92.151 2 -0.04372754757578837 0.015536132485781198 0.1509087581355318 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF'] 41673 19745 IAGPGFINV True PC9_epitope_Rep4 886.49125297978 886.49070496793 84.073 1 -0.0437354467883951 0.015536132485781198 0.1509261174331786 ['ENSG00000113643|ENST00000231572|RARS1', 'nc|ENSG00000113643|P54136-2|RARS1', 'ENST00000521939.5_1_5:167913503-167921691:+|nuORF'] 57555 6623 LEDRPSNLP True H1975_Epitope_Rep2 1039.52982331647 1039.5287299358602 30.384 2 -0.04376138951418405 0.015536132485781198 0.15098313830301824 ['ENSG00000108239|ENST00000225235|TBC1D12'] 38079 9939 HAVGDIPGV True PC9_epitope_Rep6 863.45011644379 863.44900993586 48.755 2 -0.04378588657088878 0.015536132485781198 0.15103699457385308 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 139797 11755 YPIEHGIITN True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 50.088 2 -0.043846182407129015 0.015536132485781198 0.1511696071436904 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 14345 4630 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 23.18 2 -0.04389380946930371 0.015536132485781198 0.15127441015920629 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 128582 15001 VPTNIIAA True PC9_epitope_Rep3 797.4647038787699 797.46360993586 62.828 2 -0.043907833189085664 0.015536132485781198 0.15130527828926607 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 5208 20822 ALPDDLVEV True PC9_epitope_Rep2 969.5018772331299 969.50078993586 85.535 2 -0.043909225434256946 0.015536132485781198 0.15130834303602275 ['ENSG00000120756|ENST00000457734|PLS1'] 34024 12668 GLVDEKALAQA True PC9_epitope_Rep4 1113.60298825673 1113.60188993586 56.573 2 -0.043923780388403916 0.015555741406707369 0.15134038525507615 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF', 'ENST00000511907.1_1_4:1208072-1210006:-|nuORF', 'ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 121 19890 AAAWPLLL True H1975_Epitope_Rep1 853.5061747679299 853.50506993586 82.781 2 -0.043978128803607665 0.015555741406707369 0.15146007050063484 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 57652 6479 LEEELREAA True H1975_Epitope_Rep1 1058.5244035828598 1058.5233099358602 29.982 2 -0.043991950651942904 0.015555741406707369 0.1514905186063323 ['nc|ENSG00000185347|Q86SX3-4|TEDC1', 'nc|ENSG00000185347|Q86SX3-5|TEDC1', 'nc|ENSG00000185347|Q86SX3-3|TEDC1', 'nc|ENSG00000185347|Q86SX3-2|TEDC1', 'nc|ENSG00000185347|Q86SX3-6|TEDC1', 'ENSG00000185347|ENST00000392523|TEDC1'] 21818 14138 ERYPYPVRL True PC9_epitope_Rep5 1191.6400424717897 1191.63838490379 59.393 3 -0.044012688838087295 0.015555741406707369 0.15153621017766955 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 117984 11192 TYDKGYQF True PC9_epitope_Rep5 1020.45526139388 1020.45416993586 48.038 2 -0.04406492491297997 0.015574370231002404 0.1516513395384331 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 37537 15083 GVVGEVTQV True PC9_epitope_Rep1 886.47599683846 886.47544496793 62.835 1 -0.04407551790178931 0.015574370231002404 0.15167469365103703 ['ENSG00000059378|ENST00000263549|PARP12', 'PARP12|p.Q445Sfs*10|1|0.14|ENSG00000059378|chr7:140034323-140034324|-/A|frameshift_variant', 'PARP12|p.C457Lfs*48|1|0.1|ENSG00000059378|chr7:140034286-140034287|-/A|frameshift_variant'] 53070 5261 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 25.082 2 -0.04414660737489963 0.015574370231002404 0.15183148358627846 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 130534 5970 VSQVGKEL True PC9_epitope_Rep5 858.4810822188998 858.47998993586 27.959 2 -0.044150029838557925 0.015574370231002404 0.15183903459454132 ['ENSG00000168209|ENST00000307365|DDIT4'] 740 18942 AAVLSVPAV True PC9_epitope_Rep4 825.4960040070499 825.49490993586 80.948 2 -0.04415379164380601 0.015574370231002404 0.15184733457705532 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 24919 10133 FC[Carbamidomethyl]GGSLINS True H1975_Epitope_Rep1 953.42766702648 953.42711496793 43.913 1 -0.044176064547008745 0.015574370231002404 0.15189648318427637 ['CON__P00761'] 116453 21900 TTLGDMIYV True PC9_epitope_Rep5 1011.49468367771 1011.49417496793 89.277 1 -0.04419853991203891 0.015574370231002404 0.15194608905818913 ['ENSG00000117153|ENST00000367261|KLHL12', 'nc|ENSG00000117153|Q53G59-2|KLHL12'] 99454 9767 SIARPLSLL True H1975_Epitope_Rep2 968.6018660579199 968.60076993586 42.555 2 -0.04420692519802633 0.015590060813776096 0.15196459911028676 ['ENST00000554302.1_1_15:91498777-91498930:+|nuORF'] 8283 20469 ATIFDLSEV True PC9_epitope_Rep6 993.5018772331299 993.50078993586 91.451 2 -0.04420801166056742 0.015590060813776096 0.1519669975233401 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 34917 13000 GQNNSVFTL True NCI_RA007_Epitope_Rep3 978.47705946762 978.47596993586 58.408 2 -0.04421417606596995 0.015590060813776096 0.151980606181671 ['ENSG00000131475|ENST00000253794|VPS25'] 35969 21126 GTVEQIVYL True PC9_epitope_Rep1 1020.5491617787197 1020.5485749679301 86.092 1 -0.04422918205518115 0.015590060813776096 0.15201373700566942 ['ENSG00000182481|ENST00000330459|KPNA2'] 54231 4566 KWDWRSWRESR True NCI_RA007_Epitope_Rep2 1590.7803925384198 1590.7787549037903 22.39 3 -0.04424072139366608 0.015590060813776096 0.15203921721807753 ['ENST00000340124.8_1_16:46964176-46964458:+|nuORF'] 106424 4702 STIKEVAQA True PC9_epitope_Rep4 945.5131106231698 945.51200993586 24.627 2 -0.04424811914663723 0.015590060813776096 0.1520555537869504 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 103738 18551 SPVLPLTSA True PC9_epitope_Rep5 883.50148331031 883.50038993586 76.379 2 -0.044262026125537916 0.015590060813776096 0.1520862678709675 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1'] 105625 16357 SSDSTFLVL True NCI_RA007_Epitope_Rep4 967.4862271689899 967.48512993586 70.918 2 -0.04426591495977778 0.015590060813776096 0.15209485722975033 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 117618 12367 TVTETSTVL True PC9_epitope_Rep5 949.49679185269 949.49624496793 52.565 1 -0.04427345866774042 0.015590060813776096 0.15211152009382317 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant'] 120359 5746 VEEGAPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43324496793 27.099 1 -0.04430204195189914 0.015590060813776096 0.15217466685405728 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 60493 5818 LHAAEQESL True PC9_epitope_Rep4 996.4876241513201 996.48652993586 29.238 2 -0.04430444518056991 0.015590060813776096 0.15217997689222 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000518168.5_1_5:179228470-179228931:-|nuORF', 'ENST00000520134.1_1_5:179228412-179228937:-|nuORF'] 90509 13161 RELLIIGGVAA True NCI_RA007_Epitope_Rep4 1110.6760936273397 1110.6749899358601 57.723 2 -0.044325761005731344 0.015590060813776096 0.15222708041301364 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 17447 4942 EHEARNCMNR True H1975_Epitope_Rep3 1258.52952312998 1258.52788490379 24.137 3 -0.044342020902273446 0.015590060813776096 0.15226301776692258 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF', 'ENSG00000204859|ENST00000377674|ZBTB48'] 133972 9579 VYIPSKTDL True NCI_RA007_Epitope_Rep2 1034.5648118428599 1034.56370993586 41.875 2 -0.04434379686655062 0.015590060813776096 0.15226694330816795 ['ENSG00000145912|ENST00000274606|NHP2'] 91 12207 AAAPPLTL True H1975_Epitope_Rep2 752.4432401582001 752.44214993586 52.036 2 -0.04439010747987823 0.015590060813776096 0.1523693302288954 ['nc|ENSG00000105327|Q96PG8-1|BBC3', 'nc|ENSG00000105327|Q96PG8|BBC3'] 138277 14367 YHAPDTALSTL True PC9_epitope_Rep4 1187.58225281215 1187.5811499358601 63.171 2 -0.04439237439834132 0.015590060813776096 0.15237434324916221 ['ENST00000263056.5_1_10:30726187-30726295:+|nuORF'] 86143 17629 QIDGTLSTI True PC9_epitope_Rep5 946.49712620586 946.4965749679301 72.821 1 -0.044440938859265665 0.015631203895262576 0.15248176354309922 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 91550 15802 RIIDVVYNA True PC9_epitope_Rep2 1061.58694426977 1061.58637496793 66.042 1 -0.04445338302099266 0.015631203895262576 0.15250929685406514 ['ENSG00000142937|ENST00000396651|RPS8'] 130526 17833 VSQQTIFSV True PC9_epitope_Rep5 1007.5287606873098 1007.52766993586 73.614 2 -0.04448732221922962 0.01565177414636185 0.1525844054077442 ['ENSG00000174405|ENST00000442234|LIG4'] 89234 18822 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48506993586 77.185 2 -0.04451645370993338 0.015669069257286117 0.15264889352620503 ['ENSG00000167658|ENST00000309311|EEF2'] 5240 18490 ALPHVVPTL True PC9_epitope_Rep5 945.5647522732099 945.56364993586 76.145 2 -0.04452159428637393 0.015669069257286117 0.1526602750128566 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 78373 14804 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.60641490379 61.943 3 -0.0445240926822963 0.015669069257286117 0.1526658067823354 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 76476 9497 NQGPHSPIL True PC9_epitope_Rep3 961.4981292653699 961.49702993586 41.479 2 -0.04452759188569716 0.015669069257286117 0.15267355468717012 ['ENSG00000100147|ENST00000255784|CCDC134'] 29925 15978 FVYENPISL True H1975_Epitope_Rep1 1080.54916177872 1080.5485749679299 66.784 1 -0.044536126720563785 0.015669069257286117 0.15269245351411287 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 139798 11959 YPIEHGIITN True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 50.867 2 -0.044538210795102604 0.015669069257286117 0.15269706854604648 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 85929 9719 QHGPPNIVV True PC9_epitope_Rep4 959.51886470995 959.51776993586 45.021 2 -0.044538512369968516 0.015669069257286117 0.15269773636922657 ['ENSG00000124209|ENST00000244040|RAB22A'] 128728 7451 VPYEIQKGQA True PC9_epitope_Rep2 1131.59242357303 1131.5913299358601 34.036 2 -0.04453885254969011 0.015669069257286117 0.15269848968329985 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 42430 7912 IEDSEPHIP True H1975_Epitope_Rep2 1035.48728979815 1035.48618993586 35.381 2 -0.044612232045841874 0.015669069257286117 0.15286104203286813 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 96843 5333 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 25.902 2 -0.044613525590760116 0.015669069257286117 0.15286390853848722 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 118396 14575 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 60.886 2 -0.04461665187795274 0.015669069257286117 0.15287083655946818 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 84458 5929 QAIADEQKK True NCI_RA007_Epitope_Rep3 1029.54547338061 1029.54436993586 30.301 2 -0.04466983253743682 0.0156889780228963 0.15298871901691077 ['ENST00000575500.5_2_17:78178032-78182141:+|nuORF', 'ENSG00000141527|ENST00000648509|CARD14'] 128100 15996 VPLGPGQISA True PC9_epitope_Rep3 937.5232813840499 937.52218993586 66.672 2 -0.04470191561651558 0.0156889780228963 0.15305986424707957 ['LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 26278 17220 FHFTTPAL True PC9_epitope_Rep6 932.4756029156399 932.4745099358599 78.827 2 -0.044724403723366134 0.0156889780228963 0.1531097451316684 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 31923 9974 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 43.354 2 -0.04474289411000622 0.015709212450386464 0.15315076657630725 ['ENSG00000100726|ENST00000262319|TELO2'] 103313 9516 SPLSTPTSA True PC9_epitope_Rep1 859.42871229287 859.42760993586 41.458 2 -0.04476641539357513 0.015709212450386464 0.15320295951787255 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'CD320|p.A240Qfs*29|1|0.16|ENSG00000167775|chr19:8302594-8302594|C/-|frameshift_variant', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 142598 17572 YYLTPDGQRF True PC9_epitope_Rep1 1258.59823722946 1258.5971499358602 72.383 2 -0.04481781979188852 0.01572714551264646 0.1533170643411902 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'CYP4F3|p.A508Qfs*12|1|0.29|ENSG00000186529|chr19:15659344-15659344|G/-|frameshift_variant', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'ENSG00000171903|ENST00000402119|CYP4F11'] 137889 11521 YEVKPFLTA True H1975_Epitope_Rep2 1066.5698972233 1066.5688099358601 49.373 2 -0.04486518706585361 0.01572714551264646 0.15342225657240655 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000533676.5_1_11:61641288-61643947:-|nuORF'] 77955 16840 NVLNDLAKV True PC9_epitope_Rep6 984.5603951687599 984.55928993586 77.289 2 -0.04491933193100235 0.01572714551264646 0.1535425576675547 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant'] 2256 5762 AENPKLISA True NCI_RA007_Epitope_Rep5 941.5181960036099 941.51708993586 28.85 2 -0.04492279921851049 0.01572714551264646 0.15355026350077622 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 35637 18178 GTDGFVINL True PC9_epitope_Rep5 934.47599683846 934.47544496793 74.932 1 -0.04492567042536076 0.01572714551264646 0.15355664477122077 ['ENSG00000100079|ENST00000215886|LGALS2'] 106572 12051 STMYPGLPSRL True NCI_RA007_Epitope_Rep4 1220.6223438023198 1220.62124993586 53.355 2 -0.04493035896057346 0.01572714551264646 0.1535670654320066 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 103876 8914 SPYSGPKFNSA True PC9_epitope_Rep2 1153.54038800017 1153.53928993586 39.647 2 -0.044970534867441056 0.01572714551264646 0.15365637853738753 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 106770 14506 SVAAQLTGV True PC9_epitope_Rep4 844.4654321547599 844.4648849679301 63.712 1 -0.045053553063557794 0.01572714551264646 0.15384103891499834 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 74836 14516 NHEEEMLAL True PC9_epitope_Rep4 1084.4859098991599 1084.48480993586 63.752 2 -0.045065894108390216 0.01572714551264646 0.15386850181984016 ['ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8'] 115808 15106 TSDQATLLLY True H1975_Epitope_Rep1 1123.57610480255 1123.57557496793 63.359 1 -0.045109374467370664 0.015747373697291202 0.15396528530220646 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 115686 17315 TSAESFVNV True PC9_epitope_Rep5 952.45017601344 952.44906993586 71.604 2 -0.04512187855527514 0.015747373697291202 0.15399312560920286 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 69543 20431 LVDDNYFYL True PC9_epitope_Rep6 1160.5389910178399 1160.5378899358602 91.293 2 -0.045166783406565866 0.015767929493337787 0.15409313297821867 ['ENSG00000174231|ENST00000304992|PRPF8'] 48372 7701 IYTIDGSRK True NCI_RA007_Epitope_Rep2 1051.56620882519 1051.5651099358602 34.581 2 -0.045224633570137104 0.01578815470720909 0.15422203276052807 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2', 'nc|ENSG00000077279|O43602-2|DCX', 'nc|ENSG00000077279|O43602|DCX', 'ENSG00000077279|ENST00000636035|DCX'] 70533 14979 LVYEGQLSQA True PC9_epitope_Rep2 1106.56078909158 1106.5596899358602 62.873 2 -0.04522570719882534 0.01578815470720909 0.15422442564323935 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 7255 15654 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.52387496793 68.14 1 -0.045266244613159846 0.015807387917893462 0.15431479222637184 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 137115 20646 YASDVQLIL True PC9_epitope_Rep4 1020.54916177872 1020.54806993586 87.571 2 -0.04526679647047936 0.015807387917893462 0.15431602267095818 ['nc|ENSG00000123094|Q8NHQ8-2|RASSF8', 'ENSG00000123094|ENST00000689635|RASSF8'] 38675 5611 HFVALSTNTTK True NCI_RA007_Epitope_Rep4 1217.64043639461 1217.6393299358601 28.182 2 -0.04527095721731113 0.015807387917893462 0.1543252998537098 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI'] 100764 4807 SLEDKQQVP True H1975_Epitope_Rep3 1042.5294889633 1042.52838993586 23.619 2 -0.04530183718016753 0.015807387917893462 0.15439416392980396 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A', 'ENST00000503417.1_1_5:137515369-137517456:+|nuORF'] 78843 12757 PAEPAFLA True H1975_Epitope_Rep1 814.4225047136199 814.4219549679301 54.13 1 -0.045304245961612394 0.015807387917893462 0.1543995364854111 ['ENSG00000163807|ENST00000296121|KIAA1143'] 45132 17718 IPMRDFVCA True PC9_epitope_Rep5 1050.4990578655 1050.49796993586 73.169 2 -0.04538492912231231 0.0158478274486877 0.15457956239707982 ['ENSG00000178896|ENST00000316052|EXOSC4'] 107560 8599 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6336349037902 40.899 3 -0.04538608198367788 0.0158478274486877 0.15458213572524832 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1'] 120673 12483 VEIPDPVEA True H1975_Epitope_Rep1 967.4862271689899 967.48512993586 53.056 2 -0.045394659202526985 0.0158478274486877 0.15460128200094056 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 114244 17125 TPMSVLQQA True PC9_epitope_Rep1 973.49026700361 973.48916993586 70.695 2 -0.04543213184797337 0.0158478274486877 0.15468494733023178 ['ENSG00000167978|ENST00000301740|SRRM2'] 38916 15121 HHFPGPLLV True PC9_epitope_Rep4 1015.5603355991099 1015.55922993586 66.09 2 -0.04545243509645765 0.01586671955573185 0.1547302907000233 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'nc|ENSG00000140525|Q9NVI1-4|FANCI'] 134620 11356 VYSPHVLNL True NCI_RA007_Epitope_Rep5 1040.5654805492 1040.5643899358602 50.332 2 -0.0454861172323813 0.01586671955573185 0.15480553216827092 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'DNM3|p.L134F|1|0.58|ENSG00000197959|chr1:171988959-171988959|C/T|missense_variant', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 59690 8199 LGAPQTHLGLK True PC9_epitope_Rep4 1133.6556925359298 1133.65405490379 38.996 3 -0.04550638845090188 0.01586671955573185 0.15485082680387396 ['ENSG00000142634|ENST00000375980|EFHD2', 'nc|ENSG00000115468|Q9BUP0-2|EFHD1', 'ENSG00000115468|ENST00000264059|EFHD1'] 78718 8074 PAAAEQEV True PC9_epitope_Rep3 813.3868474808899 813.38574993586 36.032 2 -0.04555404448199605 0.01586671955573185 0.15495734463550812 ['ENSG00000196453|ENST00000247930|ZNF777'] 141764 12013 YVADLVHSA True PC9_epitope_Rep1 973.4868958753299 973.48578993586 51.069 2 -0.045562332926946815 0.01586671955573185 0.15497587528902992 ['ENSG00000179820|ENST00000391770|MYADM'] 92118 17201 RLAVLFSGA True PC9_epitope_Rep2 932.5443511817999 932.54324993586 71.422 2 -0.04557239706508159 0.01586671955573185 0.15499837782192463 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7482995-7483061:+|nuORF', 'nc|ENSG00000129226|P34810-2|CD68', 'nc|ENSG00000129226|P34810-3|CD68'] 109102 16391 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.57388993586 71.009 2 -0.045580361320433214 0.01588494374517294 0.1550161866962917 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 119180 12484 VAKGGLGLI True PC9_epitope_Rep5 826.5276384884999 826.52654993586 53.019 2 -0.045584005543424316 0.01588494374517294 0.15502433598537654 ['ENSG00000101843|ENST00000217958|PSMD10'] 90096 5147 REAHPPISV True H1975_Epitope_Rep3 1004.5403284305199 1004.53922993586 24.902 2 -0.04561507680003783 0.01588494374517294 0.15509382942768324 ['ENST00000466317.1_1_17:17124695-17126113:-|nuORF', 'nc|ENSG00000154803|Q8NFG4-2|FLCN'] 8068 11594 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.48637496793 49.727 1 -0.045676041522859714 0.01588494374517294 0.15523024053205692 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 111268 17291 THLGPLASL True PC9_epitope_Rep5 907.51271670035 907.51160993586 71.515 2 -0.04568118106674913 0.01588494374517294 0.1552417440140797 ['ENSG00000127399|ENST00000359623|LRRC61'] 133840 18093 VYGHQFMNL True PC9_epitope_Rep3 1107.51715045779 1107.51604993586 74.791 2 -0.0457671340728403 0.01588494374517294 0.15543420816586556 ['ENSG00000146263|ENST00000683635|MMS22L', 'ENST00000506256.5_1_6:97707503-97720651:-|nuORF', 'ENST00000511335.5_1_6:97715738-97720957:-|nuORF', 'ENST00000509383.5_1_6:97679279-97717985:-|nuORF', 'ENST00000508976.5_1_6:97702357-97730353:-|nuORF'] 128521 6450 VPSSPLRAA True PC9_epitope_Rep6 896.50796567308 896.50686993586 33.441 2 -0.04576854196207193 0.01588494374517294 0.1554373619624928 ['ENST00000372409.7_1_20:44563346-44566100:+|nuORF'] 35632 18270 GTDGFVINL True PC9_epitope_Rep1 934.47599683846 934.47544496793 75.065 1 -0.04577527883556666 0.01588494374517294 0.15545245372743421 ['ENSG00000100079|ENST00000215886|LGALS2'] 111264 17542 THLGPLASL True PC9_epitope_Rep3 907.51271670035 907.51160993586 72.66 2 -0.0459166288175502 0.015903161849107793 0.15576932015023734 ['ENSG00000127399|ENST00000359623|LRRC61'] 11720 11272 DHARTITVAL True PC9_epitope_Rep2 1095.60365696307 1095.60254993586 48.684 2 -0.045921373266710856 0.015903161849107793 0.15577996307106826 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 127698 8875 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.4914349679301 44.076 1 -0.04593532052712764 0.015903161849107793 0.15581125278652913 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 129336 13018 VQYNEPLKV True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 55.08 2 -0.04593647239445553 0.015903161849107793 0.15581383710237473 ['ENSG00000148843|ENST00000369797|PDCD11'] 109994 8754 TEILKSVVA True H1975_Epitope_Rep1 958.5698972232999 958.56880993586 38.602 2 -0.04594930133799498 0.015903161849107793 0.15584262183468242 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 66667 11133 LSKTSVVDL True PC9_epitope_Rep3 960.54916177872 960.54806993586 47.823 2 -0.045992198099491295 0.015903161849107793 0.1559388956247554 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 74022 16115 NDFQLIGIQD True H1975_Epitope_Rep1 1161.56660274801 1161.56550993586 67.33 2 -0.045994832528149766 0.015903161849107793 0.15594480935764626 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 7213 8127 ARAIVNSAL True PC9_epitope_Rep4 913.53451477409 913.53340993586 38.715 2 -0.04605998581735229 0.015903161849107793 0.15609111062399925 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000475971.5_1_7:893033-912965:+|nuORF', 'ENST00000413171.6_1_7:892397-912965:+|nuORF', 'nc|ENSG00000164828|O94901-6|SUN1'] 6765 10519 AQDEPAESL True PC9_epitope_Rep3 958.4243551884199 958.42324993586 45.4 2 -0.04609698448499443 0.015923035185107893 0.15617423021386728 ['nc|ENSG00000141582|O00257-3|CBX4', 'ENSG00000141582|ENST00000269397|CBX4'] 20956 6941 EQPQEAVP True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 31.618 2 -0.046122854853267774 0.015923035185107893 0.1562323663780042 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'nc|ENSG00000117385|Q32P28-2|P3H1', 'ENST00000495874.5_1_1:43222117-43232675:-|nuORF', 'ENST00000463465.1_1_1:43223527-43225049:-|nuORF'] 34711 8187 GQDVGRYQV True PC9_epitope_Rep5 1020.49885754136 1020.49827496793 36.431 1 -0.0461342440671922 0.015923035185107893 0.15625796475529313 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 41839 7385 IAVTGDKK True PC9_epitope_Rep1 830.48616759934 830.48506993586 33.219 2 -0.04613720117030195 0.01593924726696153 0.15626461157650592 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant', 'MYH13|p.A197E|1|0.13|ENSG00000006788|chr17:10360015-10360015|G/T|missense_variant'] 112521 15474 TLDTHTLSL True PC9_epitope_Rep1 999.5236753068701 999.52256993586 64.342 2 -0.04613908294143227 0.01593924726696153 0.15626884141766495 ['ENSG00000078399|ENST00000343483|HOXA9'] 103987 20360 SQATDFGEALV True PC9_epitope_Rep5 1136.5349682665599 1136.53437496793 83.35 1 -0.046148023801084195 0.01593924726696153 0.15628893966989438 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 57148 4660 LDTNADKQLS True NCI_RA007_Epitope_Rep5 1103.54586730343 1103.5447699358601 24.609 2 -0.04615670219106993 0.01593924726696153 0.15630844950481887 ['ENSG00000163220|ENST00000368738|S100A9'] 99759 23349 SIIPPLFTV True PC9_epitope_Rep2 985.58481901145 985.58427496793 95.286 1 -0.04617743785131716 0.01593924726696153 0.1563550715606569 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 20308 13377 ENTLQLVRNI True NCI_RA007_Epitope_Rep2 1198.6669854956199 1198.6658899358602 56.673 2 -0.04617877113474911 0.01593924726696153 0.15635806962110074 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 16560 12209 EELSNVLAA True H1975_Epitope_Rep3 944.4814761417199 944.48036993586 52.134 2 -0.04617943474787031 0.01593924726696153 0.15635956185492272 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 123161 5647 VGKSTATLP True NCI_RA007_Epitope_Rep2 872.4967322830399 872.49562993586 26.58 2 -0.04621182720695619 0.01593924726696153 0.15643241230713828 ['ENSG00000133019|ENST00000676153|CHRM3'] 142091 17625 YVNKFASLF True PC9_epitope_Rep4 1087.57023157647 1087.56912993586 75.815 2 -0.04622202645531898 0.01593924726696153 0.15645535487689544 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6', 'nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4'] 138626 11956 YIEGGTASGFY True H1975_Epitope_Rep2 1163.51350454599 1163.51297496793 51.068 1 -0.046239753152190886 0.01593924726696153 0.1564952351201902 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 1242 6624 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.4074249679301 30.431 1 -0.046260577486350374 0.01593924726696153 0.15654209255585042 ['ENSG00000162783|ENST00000367577|IER5'] 49034 6512 KEFTEAVEA True NCI_RA007_Epitope_Rep4 1022.4920408254197 1022.4909499358599 31.654 2 -0.04628382002932331 0.01593924726696153 0.15659440192757976 ['ENSG00000167085|ENST00000300408|PHB1'] 36695 23348 GVISGLFEL True PC9_epitope_Rep5 933.5171333744499 933.51602993586 94.79 2 -0.04633038155015732 0.01593924726696153 0.15669922650245893 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 48427 21941 IYVPVSLGF True PC9_epitope_Rep4 993.55351888317 993.55297496793 92.606 1 -0.04633250071796672 0.01593924726696153 0.15670399848633293 ['ENSG00000172818|ENST00000335987|OVOL1'] 37954 5810 HADEHRLKYQC True H1975_Epitope_Rep3 1398.64626713438 1398.6451699358602 27.371 2 -0.04638110471573176 0.01595478434971219 0.15681347156832579 ['ENSG00000198018|ENST00000370489|ENTPD7'] 15568 10039 EAQFTAVE True H1975_Epitope_Rep1 893.4130622287298 893.4125149679301 43.555 1 -0.046406818211058125 0.01595478434971219 0.15687140716353687 ['nc|ENSG00000121270|Q96J66-2|ABCC11', 'ENSG00000121270|ENST00000356608|ABCC11'] 30165 18600 FYPPPRITL True PC9_epitope_Rep4 1102.61751612206 1102.61640993586 79.622 2 -0.04641431038874132 0.01595478434971219 0.15688829052745476 ['ENSG00000102221|ENST00000614628|JADE3'] 127408 21304 VNEQLYIL True PC9_epitope_Rep5 990.5385970950199 990.53750993586 86.999 2 -0.04641511758601833 0.01595478434971219 0.15689010958833513 ['ENSG00000115616|ENST00000233969|SLC9A2'] 6080 21272 APLNLGMIAA True PC9_epitope_Rep3 969.5317378927699 969.53064993586 87.117 2 -0.04642325427882615 0.01595478434971219 0.15690844680387123 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 9715 17251 AYGNVFSAF True NCI_RA007_Epitope_Rep1 974.4497820906199 974.44923496793 71.233 1 -0.0464868383166161 0.01595478434971219 0.1570517900607524 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 44889 12368 INLHSQDLL True PC9_epitope_Rep4 1051.56620882519 1051.5651099358602 55.38 2 -0.046489908425073535 0.01595478434971219 0.15705871341216174 ['nc|ENSG00000165495|Q96KN3-2|PKNOX2', 'PKNOX2|p.D397Mfs*25|1|0.64|ENSG00000165495|chr11:125430134-125430134|C/-|frameshift_variant', 'ENSG00000165495|ENST00000298282|PKNOX2'] 24494 13579 FAENNFTEL True NCI_RA007_Epitope_Rep4 1083.48728979815 1083.48618993586 59.439 2 -0.04649421924201928 0.01595478434971219 0.1570684349958268 ['ENSG00000066336|ENST00000378538|SPI1', 'nc|ENSG00000066336|P17947-2|SPI1'] 31922 9876 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 42.976 2 -0.04653733362047095 0.01595478434971219 0.15716568609343462 ['ENSG00000100726|ENST00000262319|TELO2'] 1229 8824 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.40686993586 38.908 2 -0.04654688704792668 0.01595478434971219 0.15718724054635497 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 64905 14161 LQEDPPVGV True PC9_epitope_Rep5 952.4865615221598 952.48546993586 59.481 2 -0.04655357153468204 0.01595478434971219 0.15720232322070196 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 138121 22070 YGIENEVFL True PC9_epitope_Rep1 1082.52842633414 1082.5278749679298 89.701 1 -0.04656920440617759 0.01595478434971219 0.15723760038746487 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 38085 5915 HAVGPSTSL True PC9_epitope_Rep4 867.4450310633501 867.44392993586 29.661 2 -0.046575903469834715 0.01595478434971219 0.15725271906212293 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 33593 16608 GLFIIDDK True PC9_epitope_Rep6 919.5014833103099 919.50038993586 76.339 2 -0.04669598891519252 0.01595478434971219 0.15752389023349553 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 14916 14472 DYAYLREHF True PC9_epitope_Rep6 1212.5563724174797 1212.55471490379 67.552 3 -0.046701727801036735 0.01595478434971219 0.15753685701418998 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 86259 17822 QIPVKWIGV True PC9_epitope_Rep6 1038.6226015024997 1038.62150993586 81.184 2 -0.04670584018825799 0.01595478434971219 0.15754614920797946 ['ENSG00000035687|ENST00000366535|ADSS2'] 126192 14664 VLGAFSDG True PC9_epitope_Rep1 764.37046914076 764.36992496793 61.226 1 -0.04671578474811834 0.01597530709712403 0.1575686210100188 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 25966 15036 FGANAILGV True H1975_Epitope_Rep1 860.4756029156399 860.4750549679301 63.084 1 -0.046760607712768486 0.01599582898852972 0.1576699333344214 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 118520 15023 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.52387496793 65.723 1 -0.04678245211841269 0.016014012260728138 0.15771932287880602 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A'] 42432 7893 IEDSEPHIP True H1975_Epitope_Rep3 1035.48728979815 1035.48618993586 35.336 2 -0.046859351169141306 0.016014012260728138 0.15789326821427485 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 517 7023 AAPGAEFAPNK True PC9_epitope_Rep2 1071.5349086969097 1071.53380993586 32.416 2 -0.04686946452438029 0.016014012260728138 0.15791615372435588 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 117308 19974 TVMPEDLVEA True PC9_epitope_Rep2 1102.5216267015398 1102.5205299358602 82.231 2 -0.04687168016087484 0.016014012260728138 0.1579211677716273 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118788237-118827866:+|nuORF'] 139536 21385 YLTDIALSL True PC9_epitope_Rep5 1007.55391280599 1007.55280993586 87.32 2 -0.04689456803171741 0.016014012260728138 0.15797296963124763 ['FASTKD2|p.R556T|1|0.22|ENSG00000118246|chr2:206788009-206788009|G/C|missense_variant'] 2247 11686 AENNWIEEA True H1975_Epitope_Rep3 1074.4618033263 1074.4607099358602 50.088 2 -0.04689962781801706 0.016014012260728138 0.15798442285737632 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1', 'nc|ENSG00000119661|Q4LDG9-2|DNAL1'] 32188 5525 GEVTNVTTA True NCI_RA007_Epitope_Rep5 890.4345259493 890.43397496793 27.938 1 -0.04692120070580158 0.016014012260728138 0.15803326076165744 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 1199 5427 AEAVLKHIA True NCI_RA007_Epitope_Rep4 950.5549158655 950.55380993586 27.45 2 -0.046945503869863195 0.016014012260728138 0.15808829119817902 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'UBA6|p.Y611Tfs*17|1|0.45|ENSG00000033178|chr4:67635464-67635464|A/-|frameshift_variant', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 57557 6822 LEDRPSNLP True H1975_Epitope_Rep2 1039.52982331647 1039.5287299358602 31.159 2 -0.04703755367780592 0.016054376381301864 0.15829683377619 ['ENSG00000108239|ENST00000225235|TBC1D12'] 71905 5869 MEQERFEEA True H1975_Epitope_Rep3 1167.48663817515 1167.48554993586 27.586 2 -0.04704512692844581 0.016054376381301864 0.1583139991181259 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1'] 99659 9563 SIGGILAS True H1975_Epitope_Rep3 716.40685464948 716.40630496793 41.793 1 -0.04705852681098417 0.016054376381301864 0.15834437387757921 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 5696 8015 APAKSLVGQVA True PC9_epitope_Rep4 1039.6025943339098 1039.6014899358602 38.28 2 -0.04706673686739875 0.016054376381301864 0.15836298621795133 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 16287 13635 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.37484993586 57.585 2 -0.047090958063814005 0.016074555916937704 0.15841790424689262 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 26286 13058 FHGISPGL True PC9_epitope_Rep2 826.43373810366 826.43264993586 55.507 2 -0.047099573104596934 0.016074555916937704 0.15843744053209996 ['ENSG00000174282|ENST00000380599|ZBTB4'] 64892 11524 LQEDPPAGV True PC9_epitope_Rep3 924.4552613938798 924.45416993586 49.335 2 -0.0471583607328943 0.016095069321380173 0.1585707940837206 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 72978 18487 MQLEDLKQQL True PC9_epitope_Rep1 1244.64347316972 1244.6423699358602 75.901 2 -0.047189343853394995 0.016114909939959975 0.15864110490832517 ['nc|ENSG00000269335|Q9Y6K9-2|IKBKG', 'ENSG00000269335|ENST00000594239|IKBKG'] 118448 16171 TYPIKTPTF True PC9_epitope_Rep2 1066.5698972233001 1066.5688099358601 67.455 2 -0.047189389578824695 0.016114909939959975 0.15864120868899464 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 18929 9981 ELEERQNL True H1975_Epitope_Rep3 1029.5090878718897 1029.50798993586 43.428 2 -0.047221550668737435 0.016114909939959975 0.15871421382189385 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'ATAD5|p.N1157Pfs*17|1|0.06|ENSG00000176208|chr17:30869507-30869508|-/CCTTT|frameshift_variant', 'nc|ENSG00000176208|Q96QE3-2|ATAD5'] 31565 14327 GEEETFPIP True H1975_Epitope_Rep2 1017.4654917244098 1017.46438993586 60.259 2 -0.047243878261506354 0.016156267589484876 0.15876490970960402 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 103669 6859 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 31.786 2 -0.04731702100166837 0.01617677715238691 0.15893105633927454 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 71553 4980 MAQTDPETND True PC9_epitope_Rep1 1120.43426824912 1120.4331699358602 24.015 2 -0.04733393018186639 0.016196272981198148 0.15896948201343053 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 27218 19347 FLNRAEDYTL True PC9_epitope_Rep1 1240.6088019131598 1240.6077099358602 79.223 2 -0.04733395138619258 0.016196272981198148 0.158969530203438 ['ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 107714 7571 SVSDGIHSV True PC9_epitope_Rep5 899.4348603024702 899.43376993586 34.07 2 -0.047338906745043145 0.016196272981198148 0.15898079225458736 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 67787 15377 LSYVIRRLVP True H1975_Epitope_Rep2 1214.7499272739399 1214.7488299358602 64.307 2 -0.047367921251170814 0.016196272981198148 0.15904674379136788 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 90297 4378 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 21.96 3 -0.04738198670608964 0.01620394476495949 0.15907872161604342 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 24139 17868 EYPRETFSF True PC9_epitope_Rep2 1174.5294889632999 1174.52838993586 74.032 2 -0.04738788799152106 0.01620394476495949 0.1590921394164643 ['ENST00000473682.5_1_1:111740397-111743081:-|nuORF', 'nc|ENSG00000162777|Q9H6A0-2|DENND2D', 'ENSG00000162777|ENST00000357640|DENND2D'] 78851 19530 PAEPAFLA True PC9_epitope_Rep3 814.4225047136199 814.42140993586 80.353 2 -0.04739335314479455 0.01620394476495949 0.1591045662241963 ['ENSG00000163807|ENST00000296121|KIAA1143'] 78738 10357 PAAATVAVA True PC9_epitope_Rep5 769.4334037504899 769.4328549679301 44.822 1 -0.04741351236119729 0.01620394476495949 0.15915041013465045 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 86508 13642 QLAESVANV True PC9_epitope_Rep5 929.4818104948899 929.48070993586 57.497 2 -0.04747245643236015 0.01620394476495949 0.1592845027431547 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 111817 21621 TILPAIILV True PC9_epitope_Rep6 951.63685458431 951.6363049679301 96.044 1 -0.04747525922897168 0.01620394476495949 0.1592908806558215 ['ENSG00000198712|ENST00000361739|MT-CO2'] 142906 20371 YYVGGEIVTI True PC9_epitope_Rep4 1112.57537652656 1112.5748749679299 86.502 1 -0.04750599895751541 0.01620394476495949 0.1593608412382401 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 38463 8690 HEPEPHIL True PC9_epitope_Rep5 970.4872302285 970.48612993586 38.367 2 -0.0475087208788654 0.01620394476495949 0.1593670370068863 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 5979 10945 APHPPLSVV True PC9_epitope_Rep6 915.51780208079 915.51670993586 52.977 2 -0.04752257782401073 0.01620394476495949 0.15939858123674994 ['ENSG00000183856|ENST00000361170|IQGAP3'] 134046 12726 VYKAFVDNY True PC9_epitope_Rep4 1117.54441075145 1117.5433099358602 56.806 2 -0.04754813342352934 0.01620394476495949 0.15945676696743444 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 114399 9967 TPSQIGVILR True H1975_Epitope_Rep1 1082.64479349906 1082.64368993586 43.274 2 -0.04759235595552037 0.01620394476495949 0.15955748611826842 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF'] 1057 11605 AEAFVSQIA True H1975_Epitope_Rep3 934.47599683846 934.47488993586 49.771 2 -0.047596284217667095 0.01620394476495949 0.159566434904474 ['ENSG00000128654|ENST00000249442|MTX2'] 109811 8512 TEEENYNVVA True H1975_Epitope_Rep2 1166.50914744154 1166.50804993586 37.696 2 -0.04760617023466989 0.01620394476495949 0.15958895718361385 ['ENSG00000184178|ENST00000401642|SCFD2', 'nc|ENSG00000184178|Q8WU76-2|SCFD2'] 29797 16078 FVPLPVSV True H1975_Epitope_Rep3 856.50584041476 856.50474993586 67.301 2 -0.04765130566020235 0.01620394476495949 0.15969181026113247 ['CON__P12763'] 95773 15440 RYIDRIHIF True PC9_epitope_Rep2 1231.68257599011 1231.68094490379 64.668 3 -0.04766805307528174 0.01620394476495949 0.15972998445064707 ['ENSG00000174231|ENST00000304992|PRPF8'] 62942 21541 LLPEHFLFL True PC9_epitope_Rep4 1127.63791721347 1127.63682993586 91.036 2 -0.04766981096669329 0.01620394476495949 0.15973399173948538 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 3454 9225 AGLAKSIGV True PC9_epitope_Rep4 814.4912529797799 814.49014993586 43.081 2 -0.04767642721479 0.01620394476495949 0.1597490747116037 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3'] 114985 15453 TQYTVFHSL True PC9_epitope_Rep4 1094.53965972418 1094.53856993586 67.371 2 -0.04769046525773946 0.01620394476495949 0.1597810800566631 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 30823 15548 GAPEDVDILQ True PC9_epitope_Rep4 1055.51350454599 1055.5124099358602 67.728 2 -0.04769046956462889 0.01620394476495949 0.15978108987657083 ['ENSG00000196739|ENST00000356083|COL27A1', 'nc|ENSG00000196739|Q8IZC6-3|COL27A1'] 76258 4896 NPKDNNQFASA True PC9_epitope_Rep5 1204.54726428576 1204.54616993586 23.872 2 -0.04770884997461973 0.01620394476495949 0.15982300156810736 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 26794 21769 FLAALALYLL True PC9_epitope_Rep5 1106.6739683690198 1106.67286993586 88.763 2 -0.04771298640436024 0.01620394476495949 0.15983243457417243 ['ENSG00000110628|ENST00000649076|SLC22A18'] 31886 12722 GELPAWAA True H1975_Epitope_Rep1 813.40210362221 813.4015549679301 53.992 1 -0.047725771333370165 0.01620394476495949 0.15986159247105092 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 45509 18032 IQNLVSASL True PC9_epitope_Rep5 943.53384606775 943.53274993586 74.375 2 -0.047782671401189906 0.01620394476495949 0.15999140249374352 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 133804 15542 VYFSAAHAL True PC9_epitope_Rep1 977.4970666362098 977.49596993586 64.607 2 -0.0477906951066547 0.01620394476495949 0.16000971292368474 ['nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 99093 11165 SHGPIAVL True PC9_epitope_Rep4 792.4493881678001 792.44828993586 50.725 2 -0.0477984109502063 0.01620394476495949 0.16002732205899203 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 40159 14638 HQDPQSIFV True PC9_epitope_Rep1 1069.51925863277 1069.5181699358602 61.128 2 -0.04779965854100011 0.01620394476495949 0.16003016943264445 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 36681 21763 GVIQDFINA True PC9_epitope_Rep3 975.5025459394699 975.50144993586 89.009 2 -0.04780038025523012 0.01620394476495949 0.16003181661413732 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 803 19662 AAYGWPLYI True H1975_Epitope_Rep2 1052.5331177917599 1052.53202993586 81.578 2 -0.04781980078558042 0.01620394476495949 0.16007614449857238 ['ENSG00000164535|ENST00000297056|DAGLB', 'nc|ENSG00000164535|Q8NCG7-2|DAGLB'] 85408 7919 QEVQVPEA True NCI_RA007_Epitope_Rep4 898.4396113297398 898.43850993586 37.202 2 -0.047831353588271265 0.01620394476495949 0.16010251779196993 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B'] 138386 16381 YHGLTVPL True PC9_epitope_Rep2 898.4912529797799 898.49014993586 68.256 2 -0.04783220533204593 0.01620394476495949 0.16010446230313707 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 26042 19672 FGIDLDTRV True PC9_epitope_Rep1 1034.53965972418 1034.53856993586 80.492 2 -0.04784053358022484 0.01620394476495949 0.1601234762919977 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 1634 10010 AEFQVKITA True NCI_RA007_Epitope_Rep4 1005.5494961318899 1005.54838993586 45.347 2 -0.04784465222030803 0.01620394476495949 0.160132879974605 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 35768 15593 GTIGLIHAI True PC9_epitope_Rep6 893.53345214493 893.53234993586 72.187 2 -0.04785605501948239 0.01620394476495949 0.16015891669027668 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 1184 11667 AEASAVLKV True PC9_epitope_Rep5 886.5123823471799 886.5118349679301 49.873 1 -0.04787231100454261 0.01620394476495949 0.16019603964586693 ['GPT2|p.V393Gfs*8|1|0.12|ENSG00000166123|chr16:46922373-46922374|-/C|frameshift_variant', 'ENSG00000166123|ENST00000340124|GPT2'] 71446 17217 LYTGTVSSF True PC9_epitope_Rep4 973.47566248529 973.47456993586 74.233 2 -0.04787793893183 0.01620394476495949 0.16020889313014078 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 57868 5783 LEFEHQRAP True NCI_RA007_Epitope_Rep4 1125.55670677065 1125.55560993586 28.866 2 -0.04790600250241764 0.01620394476495949 0.16027299662724176 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 120504 9402 VEFDSVQSA True H1975_Epitope_Rep2 980.445090633 980.44398993586 41.129 2 -0.047911792634404524 0.01620394476495949 0.16028622462068662 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 49281 8395 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5905899358602 37.275 2 -0.04791501818532437 0.01620394476495949 0.16029359393658132 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 2801 5634 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 26.739 2 -0.04792280202375109 0.01620394476495949 0.16031137831843395 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 96546 6875 SADYIGGSHY True H1975_Epitope_Rep3 1068.4512386426 1068.45014993586 31.403 2 -0.04794956295554558 0.01622409663646777 0.16037253082251565 ['ENSG00000120837|ENST00000240055|NFYB'] 47291 23819 IVDPFQILV True PC9_epitope_Rep3 1042.60628273202 1042.6051899358602 96.905 2 -0.04794969315095936 0.01622409663646777 0.16037282837368838 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 104338 6815 SQIRETQQL True PC9_epitope_Rep1 1101.5778361380499 1101.5767299358602 31.02 2 -0.04797241574455488 0.016244246829247976 0.1604247644201118 ['nc|ENSG00000186283|Q9H497-3|TOR3A', 'ENSG00000186283|ENST00000367627|TOR3A', 'ENST00000472001.1_1_1:179057051-179060848:+|nuORF', 'nc|ENSG00000186283|Q9H497-2|TOR3A', 'ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 129485 25861 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 109.6 2 -0.04800048220106754 0.016244246829247976 0.16048892947525414 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 116935 12977 TVFTHLSSL True PC9_epitope_Rep1 1003.5338460677499 1003.53274993586 54.788 2 -0.04803870458293722 0.016280473840901047 0.16057633909107918 ['ENSG00000171970|ENST00000306908|ZNF57'] 42000 23734 IDFPGGILSF True PC9_epitope_Rep2 1064.55424715916 1064.55367496793 96.765 1 -0.0481179591713062 0.016280473840901047 0.16075768050253117 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 102987 15696 SPFGSITSA True PC9_epitope_Rep4 865.4181476091701 865.4175949679301 68.3 1 -0.048126713146789096 0.016280473840901047 0.1607777183444827 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 1558 3995 AEERIEGRVAA True H1975_Epitope_Rep2 1199.62584895963 1199.62420490379 20.436 3 -0.04813069614337355 0.016280473840901047 0.1607868359456559 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 74232 7167 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.42834993586 32.501 2 -0.04814351828346121 0.016280473840901047 0.1608161897371273 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 107141 21074 SVIDIINGEA True PC9_epitope_Rep5 1029.5342399905699 1029.5331499358601 86.121 2 -0.04814505923794893 0.016280473840901047 0.1608197176814876 ['ENSG00000168090|ENST00000303904|COPS6'] 111263 16460 THLGPLASL True PC9_epitope_Rep2 907.51271670035 907.51160993586 68.555 2 -0.048169385054761316 0.016280473840901047 0.16087541703794786 ['ENSG00000127399|ENST00000359623|LRRC61'] 84265 21026 PYNPILGETF True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 89.039 2 -0.048170748768424886 0.016280473840901047 0.1608785399259744 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 77565 9342 NTDNNLAVY True H1975_Epitope_Rep3 1022.4668887067398 1022.46637496793 40.933 1 -0.04818434911045 0.016280473840901047 0.16090968665532104 ['ENSG00000204019|ENST00000371894|CT83'] 2790 8361 AEVAAAVVA True H1975_Epitope_Rep3 799.4439684341899 799.44341496793 37.145 1 -0.04823203284598003 0.016280473840901047 0.16101891950425903 ['ENSG00000117472|ENST00000372003|TSPAN1'] 74998 5437 NHQKDIQVL True PC9_epitope_Rep2 1093.58800689893 1093.5869099358601 26.305 2 -0.04823854738243078 0.016280473840901047 0.16103384651789757 ['ENSG00000153561|ENST00000283632|RMND5A'] 85928 10230 QHGPPNIVV True PC9_epitope_Rep2 959.51886470995 959.51776993586 44.685 2 -0.048241756976839946 0.016280473840901047 0.16104120111110504 ['ENSG00000124209|ENST00000244040|RAB22A'] 71333 23701 LYQILQGIVF True PC9_epitope_Rep3 1192.6855956818797 1192.68448993586 96.452 2 -0.0482590019668803 0.016280473840901047 0.1610807206257337 ['ENSG00000170312|ENST00000395284|CDK1'] 10042 16597 AYSIVAGVF True NCI_RA007_Epitope_Rep4 925.4909186266099 925.49037496793 71.957 1 -0.04826216138680723 0.016280473840901047 0.16108796158420888 ['ENSG00000051523|ENST00000261623|CYBA', 'ENST00000562209.1_1_16:88713507-88717421:-|nuORF', 'ENST00000566534.5_1_16:88713161-88717421:-|nuORF'] 95498 8345 RWPKKSAEF True PC9_epitope_Rep1 1147.61382772395 1147.61218490379 36.932 3 -0.04826248640080164 0.016280473840901047 0.16108870648357362 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 95181 13424 RVIDREGVYEI True PC9_epitope_Rep5 1347.7146639640298 1347.71302490379 56.651 3 -0.048271242701314936 0.016280473840901047 0.1611087758666955 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000533200.5_1_11:43904193-43919192:+|nuORF'] 134053 18100 VYKAFVMETF True PC9_epitope_Rep6 1233.6103821362897 1233.60928993586 82.257 2 -0.04830692541363911 0.01629925685380628 0.1611905768316497 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 1949 5007 AEINGTM[Oxidation]NA True H1975_Epitope_Rep3 935.4018463024701 935.40074993586 24.385 2 -0.04830703337947747 0.01629925685380628 0.16119082437835272 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 128583 15008 VPTNIIAA True PC9_epitope_Rep3 797.4647038787699 797.4641549679301 62.854 1 -0.048321670784728585 0.01629925685380628 0.1612243876127707 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 44961 15238 IPADLPVVV True H1975_Epitope_Rep2 921.55351888317 921.55242993586 63.771 2 -0.04833325262760304 0.01629925685380628 0.1612509476575951 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 77001 16265 NRGQFFTVY True PC9_epitope_Rep4 1130.55089311422 1130.5497899358602 70.516 2 -0.04834495363581702 0.01629925685380628 0.16127778379945423 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 124817 11532 VHGPPVQL True PC9_epitope_Rep3 845.47593726881 845.47484993586 49.367 2 -0.04836004003283008 0.01629925685380628 0.161312388480636 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 109103 17497 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.57388993586 72.305 2 -0.048370600536474205 0.016319733555370523 0.16133661462117832 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 98958 6714 SHAQTVVL True PC9_epitope_Rep2 853.46576650793 853.46466993586 31.237 2 -0.048439942682973705 0.016340209404467017 0.1614957451429312 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 6400 7695 APRQPGLMA True PC9_epitope_Rep1 939.4960210903898 939.49547496793 34.421 1 -0.04846550142403469 0.016356939212952365 0.16155442399048356 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 6308 6966 APRLQSEVA True PC9_epitope_Rep5 969.5243440132099 969.52324993586 31.762 2 -0.048480504252749135 0.016356939212952365 0.16158887442458805 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 31637 13329 GEFGGFSEV True NCI_RA007_Epitope_Rep4 927.3974121645899 927.39686496793 58.423 1 -0.04854654590126616 0.016356939212952365 0.1617405787989215 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 39210 13881 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45940496793 58.413 1 -0.048556226364758086 0.016356939212952365 0.16176282339473724 ['ENSG00000132646|ENST00000379143|PCNA'] 45046 8174 IPGTGFTVDA True PC9_epitope_Rep6 976.4865615221598 976.48546993586 40.997 2 -0.04866164751586249 0.016356939212952365 0.16200519471042893 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 126576 17036 VLLTGLHAV True PC9_epitope_Rep1 921.5647522732099 921.56364993586 70.353 2 -0.04868768947618658 0.016356939212952365 0.16206510260629195 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 14164 13450 DSDMQTLVY True H1975_Epitope_Rep3 1070.45902644498 1070.45847496793 57.009 1 -0.04870058746039291 0.016356939212952365 0.1620947788070013 ['ENSG00000149823|ENST00000279281|VPS51'] 45131 17854 IPMRDFVCA True PC9_epitope_Rep1 1050.4990578655 1050.49796993586 73.47 2 -0.04873215258771426 0.016356939212952365 0.16216741964373535 ['ENSG00000178896|ENST00000316052|EXOSC4'] 9192 19808 AVLTGLVEA True PC9_epitope_Rep5 871.5014833103099 871.50038993586 81.239 2 -0.04873425086207104 0.016356939212952365 0.1621722491339952 ['ENSG00000100726|ENST00000262319|TELO2'] 17628 15771 EHIPNSPFHVL True PC9_epitope_Rep4 1288.65642081192 1288.65478490379 68.587 3 -0.04874005627385746 0.016356939212952365 0.16218561162672732 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 33137 16795 GISQPIWL True H1975_Epitope_Rep2 912.5069030439199 912.5063549679301 69.85 1 -0.048746752284420936 0.016356939212952365 0.16220102490384802 ['ENSG00000163344|ENST00000368467|PMVK'] 117155 21984 TVLDAIYEV True PC9_epitope_Rep3 1021.53317736141 1021.53208993586 89.861 2 -0.04875206262622619 0.016356939212952365 0.16221324922551839 ['ENSG00000180346|ENST00000603357|TIGD2'] 35793 15490 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 64.591 2 -0.04879136987140291 0.016376386374513597 0.16230375201856656 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 119127 21639 VAIAGLMEV True PC9_epitope_Rep5 901.49428975489 901.49318993586 88.277 2 -0.04880225425302976 0.016376386374513597 0.16232881836689503 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 121433 13699 VEWDYKLVP True NCI_RA007_Epitope_Rep3 1147.5913609438699 1147.59026993586 61.199 2 -0.04881878400631717 0.016376386374513597 0.16236689049566122 ['ENSG00000162654|ENST00000355754|GBP4'] 84928 7820 QEEANLYAA True H1975_Epitope_Rep2 1007.4559896698697 1007.45488993586 35.027 2 -0.04885831979059629 0.016376386374513597 0.16245797415983007 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3', 'nc|ENSG00000167081|P40426-4|PBX3', 'ENST00000538998.1_1_9:128606084-128725334:+|nuORF', 'nc|ENSG00000167081|P40426-2|PBX3'] 24454 21165 FADPDDLPGL True PC9_epitope_Rep2 1058.49204082542 1058.49094993586 86.866 2 -0.04888842440675924 0.01639685380165633 0.16252735171690322 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 61061 6955 LIGGSHLIL True H1975_Epitope_Rep3 921.5647522732099 921.56364993586 31.714 2 -0.04892738710398242 0.01641629561815988 0.16261717098804468 ['ENSG00000197275|ENST00000336148|RAD54B', 'RAD54B|p.D840Gfs*26|1|0.1|ENSG00000197275|chr8:94372384-94372385|-/ATAAC|frameshift_variant', 'RAD54B|p.D739A|1|0.37|ENSG00000197275|chr8:94380176-94380176|T/G|missense_variant'] 85427 12575 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45416993586 53.417 2 -0.048990740251613644 0.01641629561815988 0.16276328370436977 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 106515 16268 STLPDVTEV True PC9_epitope_Rep6 959.48114178855 959.48004993586 74.938 2 -0.048994824315854675 0.01641629561815988 0.1627727057170587 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 110710 12895 TGEVIGLVA True H1975_Epitope_Rep1 857.4858332461699 857.48528496793 54.672 1 -0.04903278631928465 0.01641629561815988 0.16286030127485832 ['ALDH1B1|p.H67L|1|0.34|ENSG00000137124|chr9:38395948-38395948|A/T|missense_variant'] 44340 10139 ILDQKINEV True PC9_epitope_Rep6 1070.5971746003 1070.5960699358602 49.619 2 -0.04907367032198757 0.016431631931444736 0.16295467254086207 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 133618 14631 VYADQPHIF True PC9_epitope_Rep4 1088.52909504048 1088.5279899358602 64.207 2 -0.049081751751859214 0.016431631931444736 0.16297333074422068 ['ENSG00000100439|ENST00000428304|ABHD4'] 25554 12844 FEIQGTTVP True H1975_Epitope_Rep2 990.5022115863 990.5016649679301 54.515 1 -0.049081896585710834 0.016431631931444736 0.16297366514531636 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 111986 17041 TIREGETLEL True PC9_epitope_Rep1 1159.6084675599898 1159.60736993586 70.374 2 -0.049101450526651935 0.016431631931444736 0.1630188164408801 ['MDGA2|p.G334Dfs*22|2|0.16|ENSG00000139915|chr14:47061568-47061568|T/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2', 'nc|ENSG00000139915|Q7Z553|MDGA2'] 106802 17826 SVAESLNYV True PC9_epitope_Rep5 980.48147614172 980.48036993586 73.587 2 -0.04911192761062313 0.016431631931444736 0.16304301194814427 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 42955 8681 IESPAVAAP True H1975_Epitope_Rep2 853.4545331178899 853.4539849679301 38.352 1 -0.049153719685004135 0.016431631931444736 0.16313954806786019 ['ENSG00000106211|ENST00000248553|HSPB1'] 42963 10974 IESPPAFTA True H1975_Epitope_Rep3 931.46509780159 931.46454496793 47.3 1 -0.049171181312079516 0.016431631931444736 0.16317989362935245 ['ENSG00000152382|ENST00000367874|TADA1'] 49274 8275 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 36.78 2 -0.049182443134646765 0.016431631931444736 0.16320591771854126 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 46835 22511 ITIEDFYSV True PC9_epitope_Rep1 1085.52809198097 1085.52698993586 91.39 2 -0.04920791851040955 0.016431631931444736 0.1632647965002059 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant', 'USP24|p.V1215*|1|0.31|ENSG00000162402|chr1:55125751-55125751|C/-|frameshift_variant', 'USP24|p.A1582Qfs*15|1|0.1|ENSG00000162402|chr1:55107257-55107257|C/-|frameshift_variant'] 47920 8808 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.68958993586 40.546 2 -0.049239190309782015 0.016431631931444736 0.16333709033863616 ['ENSG00000103479|ENST00000262133|RBL2'] 70546 21735 LVYPGAFNL True PC9_epitope_Rep2 992.5331177917599 992.53202993586 89.08 2 -0.04924380518835059 0.016431631931444736 0.16334776068116716 ['ENST00000478856.5_1_3:100065035-100067726:+|nuORF', 'ENST00000465368.5_1_3:100064894-100074109:+|nuORF', 'ENSG00000114021|ENST00000394140|NIT2'] 72014 6589 METAAAVAA True NCI_RA007_Epitope_Rep4 833.3953039896098 833.39420993586 31.97 2 -0.04925709374206388 0.016431631931444736 0.1633784884163526 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 11836 4783 DHHDNTYTV True PC9_epitope_Rep5 1100.45230127176 1100.45120993586 23.442 2 -0.04927970647543465 0.016431631931444736 0.1634307852715524 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 90538 8151 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64349490379 39.175 3 -0.049284139854464684 0.016431631931444736 0.1634410396621599 ['ENSG00000127540|ENST00000591899|UQCR11'] 60490 13139 LHAAAVLL True PC9_epitope_Rep4 806.50142374066 806.50032993586 58.434 2 -0.049288401634177914 0.016431631931444736 0.16345089752706696 ['nc|ENSG00000074410|O43570-2|CA12', 'ENSG00000074410|ENST00000178638|CA12'] 2296 11953 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.5118349679301 51.133 1 -0.049293653691669874 0.016431631931444736 0.1634630465064276 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 53026 6251 KPKVIIVQA True PC9_epitope_Rep4 994.6539016307798 994.65280993586 31.09 2 -0.049378004188106395 0.016450378504284168 0.16365824288528483 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 85435 12306 QEYFGSLAA True NCI_RA007_Epitope_Rep3 984.4552613938797 984.45416993586 55.582 2 -0.04940905175502276 0.016450378504284168 0.1637301274065751 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 74014 13832 NDEELNKLLGR True PC9_epitope_Rep4 1299.67827845531 1299.67663490379 61.102 3 -0.049448597990226884 0.016450378504284168 0.16382171775911264 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6'] 114844 18696 TQNDIISTL True PC9_epitope_Rep4 1003.51858992643 1003.51807496793 79.994 1 -0.0494720687115189 0.016450378504284168 0.1638760919827405 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 84715 17500 QDPETFLII True NCI_RA007_Epitope_Rep4 1074.55972646242 1074.5586299358602 75.761 2 -0.04952123604147802 0.016450378504284168 0.16399003399431838 ['nc|ENSG00000198130|Q6NVY1-2|HIBCH', 'ENSG00000198130|ENST00000359678|HIBCH'] 41584 17121 IAAGIFNDL True NCI_RA007_Epitope_Rep2 932.4967322830399 932.49618496793 71.335 1 -0.04952146013495305 0.016450378504284168 0.16399055343033328 ['ENSG00000136930|ENST00000259457|PSMB7'] 126194 14636 VLGAFSDG True PC9_epitope_Rep3 764.37046914076 764.36992496793 61.429 1 -0.04952887588142115 0.01649162940625975 0.16400774329681167 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 105081 10855 SRDSSILIA True PC9_epitope_Rep2 960.52400966004 960.52290993586 47.072 2 -0.049552682874061026 0.016508306131359545 0.16406293611582412 ['ENST00000327320.8_2_11:85989390-85989564:+|nuORF', 'ENST00000528250.1_1_11:85988947-85989564:+|nuORF', 'ENSG00000074266|ENST00000263360|EED', 'nc|ENSG00000074266|O75530-2|EED'] 138273 18456 YHADPSLVSF True PC9_epitope_Rep3 1134.53457434374 1134.53346993586 76.195 2 -0.04957207105988542 0.016508306131359545 0.16410789326544217 ['nc|ENSG00000078900|O15350-11|TP73', 'nc|ENSG00000078900|O15350-8|TP73', 'ENSG00000078900|ENST00000378295|TP73'] 78855 19447 PAEPAFLA True PC9_epitope_Rep5 814.4225047136199 814.4219549679301 79.853 1 -0.04958596322231762 0.016508306131359545 0.1641401110601689 ['ENSG00000163807|ENST00000296121|KIAA1143'] 104374 20936 SQIYPVVCV True PC9_epitope_Rep1 1006.5157534754599 1006.5151749679301 85.352 1 -0.049586567013304744 0.016508306131359545 0.16414151142312658 ['ENSG00000144224|ENST00000272638|UBXN4'] 1866 11952 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.48512993586 51.129 2 -0.04960830011488308 0.016508306131359545 0.164191921677186 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 49990 4878 KIVDQIRPDR True NCI_RA007_Epitope_Rep4 1238.7095190139398 1238.70787490379 25.212 3 -0.049609442693709774 0.016508306131359545 0.16419457217574615 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF'] 40082 14140 HPVHPFLAV True PC9_epitope_Rep3 1015.56033559911 1015.55922993586 59.475 2 -0.04962847379570219 0.016508306131359545 0.16423872356091346 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 128673 9209 VPVQPGSSV True PC9_epitope_Rep1 868.4654321547599 868.46432993586 40.272 2 -0.049692113219800715 0.016508306131359545 0.1643864187645668 ['nc|ENSG00000149476|Q3LXA3-2|TKFC', 'ENSG00000149476|ENST00000394900|TKFC', 'ENST00000524953.1_1_11:61110045-61110363:+|nuORF'] 100179 6786 SITTVQIQK True NCI_RA007_Epitope_Rep2 1016.5866099166 1016.58550993586 31.012 2 -0.049693204233924024 0.016508306131359545 0.16438895153344327 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 130458 17048 VSPASFENV True PC9_epitope_Rep3 948.45526139388 948.45416993586 70.729 2 -0.04970542497063523 0.016508306131359545 0.1644173234244891 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 13517 4599 DNNRWRRR True NCI_RA007_Epitope_Rep4 1171.60711963407 1171.60546490379 24.101 3 -0.04974593788628493 0.016508306131359545 0.16451140102138465 ['ENST00000578774.1_1_17:38517261-38520175:+|nuORF'] 120383 4327 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 21.758 2 -0.049752962773263 0.016508306131359545 0.16452771740168645 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 141506 19980 YTLDGGDIINA True PC9_epitope_Rep2 1150.5506183307 1150.55007496793 82.255 1 -0.04977533501384307 0.01652669216697156 0.16457968715928747 ['ENSG00000204628|ENST00000512805|RACK1'] 79441 6183 PAVAVTTTT True PC9_epitope_Rep1 859.4650978015901 859.46400993586 28.598 2 -0.049882978059240524 0.01652669216697156 0.16482988178714955 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant'] 39459 14286 HLAVLTNL True PC9_epitope_Rep4 879.51780208079 879.51670993586 62.852 2 -0.049905476168766796 0.01652669216697156 0.16488220433579995 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF'] 115285 17610 TRFAEVECL True PC9_epitope_Rep3 1066.5117307241799 1066.5106299358602 72.925 2 -0.04991095147545675 0.01652669216697156 0.164894939519404 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 92806 7494 RPALVEQTAA True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 33.775 2 -0.04994586023965472 0.01652669216697156 0.16497614942896308 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 116575 15210 TTYEGSITV True PC9_epitope_Rep5 969.46549172441 969.46438993586 63.514 2 -0.04997366476389542 0.01652669216697156 0.16504085039882874 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.W2883Lfs*11|1|0.24|ENSG00000181143|chr19:8972491-8972492|-/A|frameshift_variant', 'MUC16|p.T2979Lfs*26|1|0.59|ENSG00000181143|chr19:8972205-8972205|G/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 7032 6260 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep2 935.4348606187698 935.43376993586 28.955 2 -0.049997171820721685 0.01652669216697156 0.16509556362967223 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 24813 19761 FAVALPQLL True H1975_Epitope_Rep2 970.5851533646198 970.5846049679301 81.983 1 -0.05002734784123991 0.01654404123539926 0.16516581574172945 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 69822 17546 LVGPVLGAA True PC9_epitope_Rep5 795.4854393233499 795.48489496793 72.498 1 -0.050031434124275576 0.01654404123539926 0.16517533036915594 ['nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 91429 17710 RHLDVRILL True PC9_epitope_Rep5 1133.70331143469 1133.70166490379 73.139 3 -0.05003475418814245 0.01654404123539926 0.1651830611618744 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 97879 9238 SELRSVLV True H1975_Epitope_Rep2 901.5232813840499 901.52218993586 40.49 2 -0.05004283994060297 0.01654404123539926 0.16520188984618958 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1', 'ENST00000575981.1_1_16:3022956-3024767:-|nuORF'] 32115 12662 GETIFVTAP True NCI_RA007_Epitope_Rep3 933.48074786573 933.4801949679301 57.049 1 -0.050057220256898724 0.01654404123539926 0.1652353795406508 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 132365 5250 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 27.979 2 -0.05006543682393728 0.01654404123539926 0.1652545166619832 ['ENSG00000160161|ENST00000291495|CILP2'] 45532 5507 IQQNTFTR True PC9_epitope_Rep3 1006.51959298594 1006.51848993586 26.258 2 -0.05008919931817618 0.01654404123539926 0.16530986947892898 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 45118 21175 IPLTLLPAA True PC9_epitope_Rep2 907.5742543277498 907.57314993586 86.905 2 -0.050135466540591485 0.01654404123539926 0.16541767866262289 ['ENSG00000116903|ENST00000366645|EXOC8'] 71295 15886 LYQDHMQYI True PC9_epitope_Rep3 1209.54884450889 1209.54774993586 66.255 2 -0.05014253784777175 0.01654404123539926 0.16543415969974823 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 104086 16881 SQDTSFTTL True PC9_epitope_Rep1 998.4556553167 998.4551049679301 69.756 1 -0.05016912461713303 0.01654404123539926 0.16549613449040126 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 131998 17079 VTSNSGILGV True PC9_epitope_Rep5 945.51311062317 945.51200993586 70.713 2 -0.05018081377714217 0.01656344818986658 0.16552338698910535 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 114545 16194 TQAPPNVVL True PC9_epitope_Rep5 937.5232813840499 937.52218993586 67.281 2 -0.050209385838087386 0.01656344818986658 0.1655900127084783 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 18310 20641 EISAHLSALVL True PC9_epitope_Rep5 1151.65502382959 1151.65392993586 84.448 2 -0.050223861607572064 0.01656344818986658 0.1656237744354774 ['ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 128169 12873 VPLRFPAGSAA True PC9_epitope_Rep4 1084.6029286870798 1084.60182993586 57.39 2 -0.05024007067899324 0.01656344818986658 0.16566158385702948 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 47143 9725 ITVNDLPVGR True H1975_Epitope_Rep3 1082.6084079903399 1082.60730993586 42.427 2 -0.05026059538446167 0.016583885783162576 0.16570946773670678 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 1302 6798 AEDPSQLPS True H1975_Epitope_Rep3 942.42944056886 942.42834993586 31.101 2 -0.05029435784906676 0.01660225242072892 0.16578825403577613 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 37078 21385 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49070496793 87.729 1 -0.050298789400593194 0.01660225242072892 0.165798597014375 ['ENSG00000010292|ENST00000315579|NCAPD2'] 27927 12468 FQEEVFGKHV True PC9_epitope_Rep1 1218.6033226098998 1218.60166490379 52.824 3 -0.0503115137837959 0.01660225242072892 0.16582829722066073 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2', 'ENST00000550859.5_1_12:56575573-56583167:-|nuORF'] 5981 11143 APHPPLSVV True PC9_epitope_Rep6 915.51780208079 915.51670993586 53.813 2 -0.05032397158052228 0.01660225242072892 0.1658573784162514 ['ENSG00000183856|ENST00000361170|IQGAP3'] 63904 21939 LNPYTLYTF True PC9_epitope_Rep2 1130.5648118428599 1130.56370993586 89.865 2 -0.050388465613646655 0.01660225242072892 0.16600798296058555 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 27735 12480 FPRPVTVEP True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 55.811 2 -0.050461705234261404 0.01660225242072892 0.16617911389141715 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 28298 10697 FRQQRPLEF True PC9_epitope_Rep2 1219.6461904813898 1219.64455490379 46.46 3 -0.05047895168096271 0.01660225242072892 0.16621942783744525 ['ENSG00000089693|ENST00000203630|MLF2'] 136218 20755 WRSLPLLPV True PC9_epitope_Rep3 1079.64915060351 1079.6480499358602 85.103 2 -0.05048629134827392 0.016620959029335993 0.16623658632930674 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 124902 7263 VHPPPTTTY True PC9_epitope_Rep3 1011.5025459394701 1011.50144993586 32.945 2 -0.05049234226460961 0.016620959029335993 0.16625073284590622 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 140850 16422 YSDSFPMEL True H1975_Epitope_Rep1 1087.45321278855 1087.4526749679299 68.527 1 -0.05051174536509422 0.016620959029335993 0.16629610069682005 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 141841 5275 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 26.84 2 -0.050521019116922465 0.016620959029335993 0.16631778709422054 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 1250 14876 AEDGFFVPP True H1975_Epitope_Rep1 977.4494477374499 977.4488949679301 62.455 1 -0.050554813741807064 0.016620959029335993 0.1663968298290493 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 53153 10999 KPYTVVDVSA True PC9_epitope_Rep4 1077.57062549929 1077.5695299358601 50.085 2 -0.050559914342639144 0.016620959029335993 0.16640876174132163 ['PEAK1-TSPAN3|1|fusion', 'PEAK1-TSPAN3|2|fusion', 'PEAK1|p.K1454Rfs*15|1|0.13|ENSG00000173517|chr15:77115025-77115038|GGCTCCTCTGCTTC/-|frameshift_variant', 'ENSG00000173517|ENST00000682557|PEAK1'] 130234 21956 VSFGDFVQV True PC9_epitope_Rep2 996.4916469025999 996.49109496793 89.93 1 -0.05059734419099663 0.01664035233505069 0.16649633834528693 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 78660 11420 NYVEVTRKW True PC9_epitope_Rep5 1193.61930702721 1193.61820993586 48.926 2 -0.05060659686083264 0.01664035233505069 0.1665179917569924 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 124888 21075 VHNLLLTYL True PC9_epitope_Rep2 1084.62808080576 1084.6269899358601 86.522 2 -0.050609635648907955 0.01664035233505069 0.1665251036165686 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1'] 103588 10967 SPSPPSVAV True PC9_epitope_Rep6 839.4388830537499 839.43778993586 53.072 2 -0.050615526643204206 0.01664035233505069 0.16653889120869048 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 108155 18120 SYFSGSHMF True PC9_epitope_Rep1 1061.4276667470501 1061.42656993586 74.49 2 -0.05063332113527114 0.016658704276841907 0.16658054271205144 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 91004 7150 RFEEKHAYF True PC9_epitope_Rep2 1225.5880068989297 1225.58635490379 32.896 3 -0.05066896437732261 0.016658704276841907 0.16666399233460097 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 98546 21415 SFPLDIGSV True PC9_epitope_Rep1 933.48074786573 933.47964993586 87.209 2 -0.0506709338836117 0.016658704276841907 0.16666860419750681 ['ENSG00000130052|ENST00000374599|STARD8', 'STARD8|p.A398Hfs*61|1|0.27|ENSG00000130052|chrX:68718345-68718345|G/-|frameshift_variant', 'STARD8|p.E40Kfs*44|1|0.58|ENSG00000130052|chrX:68717271-68717271|G/-|frameshift_variant'] 58794 10367 LESLHSFVA True H1975_Epitope_Rep3 1001.51819600361 1001.51708993586 44.931 2 -0.0507075729183371 0.016658704276841907 0.16675441397284266 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 120194 9181 VEAPPVVTA True H1975_Epitope_Rep3 881.4858332461699 881.48528496793 40.305 1 -0.05072754411643069 0.016658704276841907 0.16680119878952857 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 74749 6977 NHAPSVQI True PC9_epitope_Rep4 864.44536541652 864.44426993586 34.081 2 -0.050734949466000184 0.016658704276841907 0.16681854875549149 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 103672 6372 SPVFRTGSE True PC9_epitope_Rep4 978.4770594676199 978.47596993586 31.594 2 -0.05074988876849643 0.016658704276841907 0.16685355342842403 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 10025 6210 AYRQGHFTY True PC9_epitope_Rep2 1141.53049202281 1141.52884490379 29.282 3 -0.0507712839236409 0.01667497300440236 0.16690369298261679 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 2436 16819 AEQIPLLVQGV True H1975_Epitope_Rep2 1165.6706738937298 1165.6695699358602 69.941 2 -0.050784065588251215 0.01667497300440236 0.16693365131541602 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 118041 15466 TYFDKNYNL True PC9_epitope_Rep2 1176.5451390274397 1176.5440499358601 64.767 2 -0.05080489684191609 0.01667497300440236 0.16698248390299453 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 76854 18942 NRDELELEL True PC9_epitope_Rep5 1129.5615173675699 1129.56097496793 77.885 1 -0.05082377765880074 0.01667497300440236 0.16702675199804212 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 35902 5860 GTQPGPLLK True NCI_RA007_Epitope_Rep4 909.5283667644899 909.52726993586 29.163 2 -0.05083920952647097 0.01667497300440236 0.16706293911280487 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'ENST00000492668.5_1_10:7611547-7618533:-|nuORF', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 72455 12530 MKTILSNQTVD True PC9_epitope_Rep3 1248.63838778928 1248.63728993586 53.221 2 -0.05084952410479324 0.01667497300440236 0.16708712912123333 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF'] 127687 9599 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 44.548 2 -0.0508542319293543 0.01667497300440236 0.16709817075764977 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 1283 6048 AEDPAPHYP True H1975_Epitope_Rep3 995.43486030247 995.43376993586 28.277 2 -0.05087377303219451 0.01667497300440236 0.16714400694138748 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 9003 14150 AVGPIVQL True NCI_RA007_Epitope_Rep2 795.48543932335 795.48489496793 59.703 1 -0.05087738939731955 0.01667497300440236 0.1671524904553182 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.D74Y|1|0.21|ENSG00000112531|chr6:163455356-163455356|G/T|missense_variant'] 57810 5256 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.60254993586 25.284 2 -0.05091075121035539 0.01667497300440236 0.16723076554849992 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 49265 7899 KEQLPPLAA True H1975_Epitope_Rep1 965.5545815123298 965.55348993586 35.336 2 -0.05091514161926372 0.01667497300440236 0.16724106824304866 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 96539 21787 SADTTILFV True PC9_epitope_Rep3 965.50696261357 965.50586993586 89.102 2 -0.05091534565615094 0.01667497300440236 0.16724154705313693 ['ENSG00000124783|ENST00000244763|SSR1', 'SSR1-FARS2|1|fusion'] 117682 20438 TVTSVLTSV True PC9_epitope_Rep4 905.50696261357 905.50586993586 86.762 2 -0.0509250723440291 0.01667497300440236 0.1672643735094055 ['ENSG00000106689|ENST00000373615|LHX2'] 110338 5559 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.4390649679301 26.39 1 -0.050937192233696055 0.01669469881019124 0.16729281902296855 ['ENSG00000167470|ENST00000682408|MIDN'] 31805 10201 GEIGLGTPP True H1975_Epitope_Rep3 839.43888305375 839.43833496793 44.283 1 -0.05095744911795715 0.01669469881019124 0.16734036890013734 ['ENSG00000131400|ENST00000253719|NAPSA'] 61322 18700 LIRGESLII True PC9_epitope_Rep2 1012.62808080576 1012.62698993586 77.301 2 -0.05097804369409364 0.01669469881019124 0.16738872011255518 ['ENSG00000162753|ENST00000367714|SLC9C2', 'SLC9C2|p.S555Vfs*10|1|0.12|ENSG00000162753|chr1:173535942-173535943|-/AC|frameshift_variant'] 5698 9510 APAKSLVGQVA True PC9_epitope_Rep5 1039.6025943339098 1039.6014899358602 41.539 2 -0.05099535099779274 0.016712340142833418 0.16742936033273934 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 48201 20921 IYPTTYVQF True PC9_epitope_Rep2 1130.56481184286 1130.56427496793 85.918 1 -0.051011809897164896 0.016712340142833418 0.1674680140861137 ['ENSG00000179820|ENST00000391770|MYADM'] 115232 7323 TREAGSALL True PC9_epitope_Rep4 916.4977949121999 916.49668993586 35.496 2 -0.05102028277189993 0.016712340142833418 0.16748791482009098 ['ENSG00000145386|ENST00000274026|CCNA2'] 113997 10266 TPAPHSPWTA True PC9_epitope_Rep2 1063.50869394907 1063.50758993586 44.821 2 -0.05103121208243232 0.016712340142833418 0.16751358730917132 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 132199 17130 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.49037496793 70.715 1 -0.051031842299937735 0.016712340142833418 0.1675150677384278 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 140170 15823 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51807496793 66.122 1 -0.051032687276547445 0.016712340142833418 0.1675170526661144 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 78848 19199 PAEPAFLA True PC9_epitope_Rep2 814.4225047136199 814.42140993586 79.22 2 -0.05104839801886837 0.016712340142833418 0.16755396131877426 ['ENSG00000163807|ENST00000296121|KIAA1143'] 5967 12940 APHPPLSVV True PC9_epitope_Rep1 915.51780208079 915.51670993586 54.646 2 -0.051087261372241455 0.016712340142833418 0.16764528334073642 ['ENSG00000183856|ENST00000361170|IQGAP3'] 126770 17014 VLPGVDALSNI True NCI_RA007_Epitope_Rep1 1096.61282466444 1096.61227496793 70.309 1 -0.05109075721730604 0.016712340142833418 0.16765349948278446 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 24837 14979 FAVPENSSV True PC9_epitope_Rep5 948.4552613938799 948.45471496793 62.62 1 -0.05114069062705478 0.016732058707521123 0.16777088337693066 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 113766 17580 TMLGKFYHF True PC9_epitope_Rep2 1142.55828699378 1142.5566449037901 72.899 3 -0.05114441831849697 0.016732058707521123 0.1677796485235349 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 90094 5136 REAHPPISV True H1975_Epitope_Rep2 1004.5403284305199 1004.53922993586 24.833 2 -0.05114479275185293 0.016732058707521123 0.1677805289671523 ['ENST00000466317.1_1_17:17124695-17126113:-|nuORF', 'nc|ENSG00000154803|Q8NFG4-2|FLCN'] 103336 13680 SPMPGTLTA True PC9_epitope_Rep5 873.4266041178901 873.42550993586 57.646 2 -0.051158487207816204 0.01675073167694128 0.16781273212959516 ['ENSG00000113456|ENST00000382038|RAD1'] 53306 16373 KQLEAIDQLHL True PC9_epitope_Rep2 1306.7245003717399 1306.72285490379 68.224 3 -0.051168821207270766 0.01675073167694128 0.1678370355726201 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 42431 8069 IEDSEPHIP True H1975_Epitope_Rep2 1035.48728979815 1035.48618993586 35.985 2 -0.051173600639021 0.01675073167694128 0.16784827655665763 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 89810 12723 RALNQEQVIAV True PC9_epitope_Rep2 1239.6935345966301 1239.6924299358602 54.245 2 -0.0511777265171807 0.01675073167694128 0.16785798079319578 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 9936 14423 AYMPHTFFI True NCI_RA007_Epitope_Rep3 1125.53173789277 1125.53064993586 64.045 2 -0.05121404699613115 0.01675073167694128 0.1679434231706886 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 53080 4387 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 23.317 2 -0.051234136570521095 0.01675073167694128 0.16799069468908726 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 55717 19235 LALLAALL True H1975_Epitope_Rep3 796.54222592348 796.54167496793 80.657 1 -0.05126136619211472 0.016765572477901815 0.16805478025155302 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 97627 9969 SEFGKIYGP True NCI_RA007_Epitope_Rep1 996.4916469025998 996.49054993586 42.781 2 -0.051275869268967586 0.016765572477901815 0.16808891981012447 ['ENSG00000082781|ENST00000296181|ITGB5'] 68953 9014 LTPEELER True PC9_epitope_Rep3 985.5080252427299 985.50692993586 39.616 2 -0.05128257442390275 0.016765572477901815 0.16810470489025603 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 8399 8909 ATLQYIVGR True NCI_RA007_Epitope_Rep3 1019.5763795860698 1019.57528993586 42.128 2 -0.051300393213779584 0.016765572477901815 0.16814665785741156 ['ENSG00000085377|ENST00000652536|PREP'] 109142 17584 TAMDQVFHV True PC9_epitope_Rep4 1046.4855159763401 1046.4844099358602 75.652 2 -0.05130074555548461 0.016765572477901815 0.16814748748460528 ['ENSG00000145012|ENST00000617246|LPP'] 61283 20038 LIPPSLQGV True PC9_epitope_Rep1 922.5487678558999 922.54766993586 81.905 2 -0.051338840593178794 0.016765572477901815 0.16823720148387153 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 108467 16992 SYLTSASSL True PC9_epitope_Rep2 927.45492704071 927.45382993586 70.609 2 -0.051390796624017625 0.016765572477901815 0.16835960627468594 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 8761 9952 AVDEDRKMYL True PC9_epitope_Rep5 1238.5965229772999 1238.59486490379 43.255 3 -0.05139497471267814 0.016765572477901815 0.1683694519708277 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 102910 9773 SPASPLSSA True PC9_epitope_Rep1 815.4024975450301 815.40140993586 42.453 2 -0.0514295807956902 0.016765572477901815 0.1684510152473056 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 17167 9702 EGRLALKL True PC9_epitope_Rep2 898.5600012459399 898.55890993586 42.657 2 -0.05145028431810407 0.016765572477901815 0.16849982326455484 ['ENSG00000129749|ENST00000250699|CHRNA10'] 5210 20106 ALPDDLVEV True PC9_epitope_Rep4 969.5018772331299 969.50078993586 85.472 2 -0.051450848906440784 0.016765572477901815 0.1685011543902917 ['ENSG00000120756|ENST00000457734|PLS1'] 116406 6988 TTISKVSQV True PC9_epitope_Rep1 961.5444107514498 961.54330993586 31.684 2 -0.05146008701762347 0.016765572477901815 0.1685229359469675 ['ENSG00000065183|ENST00000349139|WDR3'] 49419 6549 KEVLVPEA True NCI_RA007_Epitope_Rep3 883.5014833103099 883.50038993586 32.807 2 -0.05147154314559109 0.016765572477901815 0.16854994956446492 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-4|NISCH', 'nc|ENSG00000010322|Q9Y2I1-3|NISCH'] 109913 14073 TEFPGVVV True H1975_Epitope_Rep3 846.4487194614599 846.4481749679301 59.456 1 -0.05153901947083431 0.016765572477901815 0.16870911385336324 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 112791 24110 TLIEDILGV True PC9_epitope_Rep1 971.5539128059899 971.55280993586 97.553 2 -0.051546356692456864 0.016765572477901815 0.1687264266535474 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 5472 16665 ALVVQVAEA True PC9_epitope_Rep3 898.5123823471799 898.51128993586 69.238 2 -0.051575290757689934 0.016765572477901815 0.1687947098274213 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 26908 15234 FLDGNEMTL True NCI_RA007_Epitope_Rep5 1038.46919720586 1038.46808993586 65.281 2 -0.05159597130347484 0.016765572477901815 0.16884352558156815 ['ENSG00000169504|ENST00000374379|CLIC4'] 71779 4601 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 22.82 2 -0.0516108088024271 0.016785973648718748 0.16887855442635297 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 71730 9547 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42662993586 41.731 2 -0.05162613257402043 0.016802190507799537 0.16891473602555798 ['ENSG00000026025|ENST00000544301|VIM'] 100371 5521 SKTSAQVVL True NCI_RA007_Epitope_Rep3 931.5338460677499 931.53274993586 28.716 2 -0.051627529237664206 0.016802190507799537 0.16891803398642077 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'ENST00000528593.1_1_11:46804822-46806223:-|nuORF', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 37039 10166 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 44.105 2 -0.051646847770967744 0.016802190507799537 0.16896365521130619 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 17227 11540 EGYADKNLIA True PC9_epitope_Rep1 1092.54513902744 1092.5440499358601 49.267 2 -0.05165643336556722 0.016802190507799537 0.1689862946902356 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000466798.1_1_7:99013792-99015269:+|nuORF'] 21556 17157 ERNRYFISL True PC9_epitope_Rep1 1196.6302060640799 1196.62855490379 70.815 3 -0.05165680851462808 0.016802190507799537 0.16898718076432961 ['ENSG00000163481|ENST00000295704|RNF25'] 101820 22292 SLPEVLPIL True PC9_epitope_Rep4 979.5953836951498 979.59428993586 93.985 2 -0.05167052306776557 0.016802190507799537 0.16901957549976068 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 33290 11298 GKLFMAQAL True NCI_RA007_Epitope_Rep3 977.5368232732097 977.53572993586 51.55 2 -0.051680594878546475 0.016802190507799537 0.16904336828232583 ['ENSG00000147677|ENST00000521861|EIF3H'] 134285 10540 VYNPHSDTW True PC9_epitope_Rep5 1117.48287312405 1117.48176993586 45.532 2 -0.05172289917172674 0.016802190507799537 0.1691433270673838 ['ENSG00000197429|ENST00000396478|IPP'] 11713 11912 DHAQESLSL True PC9_epitope_Rep5 998.4668887067401 998.46578993586 50.817 2 -0.05173409106725535 0.016802190507799537 0.16916977800707914 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN', 'ENST00000492437.1_1_1:231474120-231475626:+|nuORF'] 13314 7966 DLTREGGSIP True NCI_RA007_Epitope_Rep5 1043.5247379360299 1043.52364993586 37.33 2 -0.05174101883614665 0.016802190507799537 0.16918615239324608 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 4328 14177 AIITGFRNV True PC9_epitope_Rep4 989.56581490237 989.56470993586 62.435 2 -0.0517771909886201 0.016802190507799537 0.16927166443466646 ['nc|ENSG00000156970|O60566-2|BUB1B', 'ENSG00000156970|ENST00000287598|BUB1B', 'nc|ENSG00000156970|O60566-3|BUB1B'] 130200 18388 VSEPRYFQL True PC9_epitope_Rep5 1137.5818588893299 1137.5807699358602 75.749 2 -0.05181059614336428 0.016802190507799537 0.1693506590678731 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 30752 7010 GALPYAVGK True NCI_RA007_Epitope_Rep3 874.4912529797799 874.49014993586 34.687 2 -0.051823344561135534 0.016802190507799537 0.1693808118488034 ['ENSG00000165934|ENST00000298875|CPSF2'] 95780 13497 RYIDRIHIFF True NCI_RA007_Epitope_Rep4 1378.7509899031 1378.74934490379 59.126 3 -0.051918944280239035 0.016822236050611908 0.16960703227128918 ['ENSG00000174231|ENST00000304992|PRPF8'] 26617 22620 FILPIGATV True PC9_epitope_Rep1 929.5586042636099 929.55750993586 91.817 2 -0.051962698481004405 0.016822236050611908 0.16971063168149647 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5', 'nc|ENSG00000115902|P43007-2|SLC1A4', 'ENSG00000115902|ENST00000234256|SLC1A4'] 128 19803 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.50506993586 82.914 2 -0.05199630853101146 0.01684088269454123 0.16979023885987513 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 6588 12407 APVNVTTEV True PC9_epitope_Rep4 928.4865615221601 928.48546993586 55.528 2 -0.05200482273213701 0.01684088269454123 0.1698104088737835 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 75334 20611 NIPPYFVAL True PC9_epitope_Rep6 1032.56441792004 1032.56332993586 92.011 2 -0.05201762975204536 0.01684088269454123 0.16984075131134704 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 119620 9780 VATVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 42.48 2 -0.05205899866921133 0.01684088269454123 0.1699387856848628 ['CON__P00761'] 49976 7174 KIRRSSEEHLR True H1975_Epitope_Rep1 1409.7851435656899 1409.78350490379 32.616 3 -0.052062975229903795 0.01684088269454123 0.16994821102558139 ['ENSG00000078401|ENST00000379375|EDN1'] 106045 10847 STAAKIMGV True PC9_epitope_Rep3 876.4738886634799 876.47278993586 46.696 2 -0.0520635795407202 0.01684088269454123 0.1699496434061424 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 8768 14149 AVDGNTVEL True PC9_epitope_Rep3 916.45017601344 916.44906993586 59.508 2 -0.052091662844550274 0.016880962256325176 0.17001621671586348 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 85989 13911 QHLLDTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 58.344 2 -0.05210342188046356 0.016880962256325176 0.17004409708436127 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 24428 12233 FADGHVLEL True NCI_RA007_Epitope_Rep4 999.5025459394699 999.50144993586 54.049 2 -0.05211664353043231 0.016880962256325176 0.17007544865946173 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 59985 10130 LGIETPLPK True NCI_RA007_Epitope_Rep1 966.5749826037398 966.57388993586 43.414 2 -0.05212999678660034 0.016880962256325176 0.17010711594170314 ['ENSG00000090339|ENST00000264832|ICAM1'] 108626 10561 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59198993586 45.514 2 -0.05216090488404276 0.016918930126477296 0.17018042860273602 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 91813 6891 RKIKGVIEL True NCI_RA007_Epitope_Rep4 1054.6862643882198 1054.6851699358601 33.124 2 -0.05217098164135722 0.016918930126477296 0.17020433446646588 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF', 'ENST00000495254.5_1_1:79119932-79128426:+|nuORF'] 14976 21947 DYFFKPVLF True PC9_epitope_Rep4 1174.60628273202 1174.6051899358602 92.629 2 -0.05217683701004176 0.016918930126477296 0.1702182265628039 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 93189 7443 RPPLNPVSA True PC9_epitope_Rep4 949.53451477409 949.53340993586 35.981 2 -0.05218434677337775 0.016918930126477296 0.17023604480559043 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1'] 138125 21051 YGIENEVFL True PC9_epitope_Rep4 1082.52842633414 1082.52732993586 89.133 2 -0.052190889925715765 0.016918930126477296 0.17025157053535236 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 78410 24143 NYLPFIMEL True PC9_epitope_Rep1 1138.57326835158 1138.57216993586 97.679 2 -0.05220012822483057 0.016918930126477296 0.17027349286082033 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 14254 13090 DSNNLC[Carbamidomethyl]LHF True NCI_RA007_Epitope_Rep1 1118.48149350449 1118.48038993586 54.91 2 -0.052204028285545864 0.016918930126477296 0.17028274816335034 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 57921 9159 LEGGQEDFESS True PC9_epitope_Rep6 1196.48332661652 1196.48222993586 45.353 2 -0.05220724569735976 0.016918930126477296 0.1702903836945482 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 99973 19190 SIPEGALVAV True PC9_epitope_Rep4 954.5385970950199 954.53750993586 81.914 2 -0.052226593029520964 0.016918930126477296 0.17033630307507688 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 85931 11113 QHGPPNIVV True PC9_epitope_Rep5 959.51886470995 959.51776993586 47.736 2 -0.05223203831097589 0.016918930126477296 0.17034922840887864 ['ENSG00000124209|ENST00000244040|RAB22A'] 111612 14301 TIDNFTHGL True PC9_epitope_Rep4 1016.49270953176 1016.49160993586 62.909 2 -0.052268579241841424 0.016938259319152466 0.17043598046543004 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 45363 7357 IQDNHDGTYTV True PC9_epitope_Rep2 1261.55749461629 1261.5563899358601 33.68 2 -0.052286249717443584 0.016938259319152466 0.1704779418730759 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 47694 9503 IYAIVKEKY True PC9_epitope_Rep2 1125.64339651673 1125.6417449037901 41.898 3 -0.05230925571368471 0.016938259319152466 0.17053258293063733 ['ENST00000473576.6_1_13:50235206-50237234:-|nuORF', 'ENSG00000123179|ENST00000242827|EBPL', 'nc|ENSG00000123179|Q9BY08-5|EBPL', 'ENST00000569153.1_1_16:64294558-64295142:-|nuORF'] 91593 21287 RILDYVINL True PC9_epitope_Rep2 1117.64954452633 1117.64844993586 87.344 2 -0.052345271310704475 0.016938259319152466 0.17061814460356378 ['nc|ENSG00000153832|Q8NEA4-3|FBXO36', 'ENSG00000153832|ENST00000283946|FBXO36'] 114808 19631 TQLGPPYHILV True PC9_epitope_Rep2 1236.68665831104 1236.68556993586 80.896 2 -0.05244754114114011 0.016957936853452742 0.17086125031920493 ['ENSG00000119616|ENST00000341162|FCF1'] 104949 12845 SRDEYYHLL True PC9_epitope_Rep4 1194.56693710118 1194.5658499358601 57.273 2 -0.05244811107907814 0.016957936853452742 0.17086260571983167 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 36619 19657 GVIAGLNVL True PC9_epitope_Rep6 854.52255310806 854.52144993586 88.269 2 -0.052463648131476935 0.016957936853452742 0.17089955779921642 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 71780 4697 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 23.192 2 -0.0524746323869343 0.016997284580146342 0.17092568485622395 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 77976 16262 NVPDRYFAV True PC9_epitope_Rep5 1079.53999407735 1079.5388899358602 67.543 2 -0.052478452297256485 0.016997284580146342 0.1709347714419534 ['IGSF3|p.K1161Rfs*33|1|0.26|ENSG00000143061|chr1:116577417-116577417|C/-|frameshift_variant', 'ENSG00000143061|ENST00000369486|IGSF3', 'nc|ENSG00000143061|O75054-2|IGSF3'] 1081 8341 AEAILGQNAA True NCI_RA007_Epitope_Rep5 956.4927095317599 956.49160993586 38.757 2 -0.05249625056132531 0.016997284580146342 0.17097711288371248 ['ENSG00000132383|ENST00000254719|RPA1'] 90148 6262 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.5503749679299 29.099 1 -0.052516212672290154 0.016997284580146342 0.17102460976320535 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 103102 14907 SPHGIIVIA True PC9_epitope_Rep3 905.5334521449299 905.53234993586 62.475 2 -0.052521779976987315 0.016997284580146342 0.1710378577942805 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 5306 17180 ALQPLPAT True PC9_epitope_Rep3 809.46470387877 809.46360993586 71.24 2 -0.05252642790044593 0.016997284580146342 0.17104891854013304 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1', 'nc|ENSG00000103932|Q9BWH6-3|RPAP1'] 75161 5908 NHYQKQLEI True PC9_epitope_Rep6 1171.5985715826298 1171.59746993586 30.993 2 -0.05259775488485537 0.017017307493004456 0.17121871214084838 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 105526 12434 SSAPGLTSV True PC9_epitope_Rep1 817.4181476091701 817.4175949679301 52.69 1 -0.05261168131549557 0.017017307493004456 0.1712518761145419 ['ENSG00000115216|ENST00000379852|NRBP1'] 108254 15561 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.5695299358601 68.773 2 -0.05261856529007603 0.01703768188036314 0.17126827086723023 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 43923 18464 IIDDTIFNL True NCI_RA007_Epitope_Rep4 1062.55972646242 1062.5586299358602 79.915 2 -0.05261993736939342 0.017052400389532353 0.17127153870320405 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 13313 8094 DLTREGGSIP True NCI_RA007_Epitope_Rep4 1043.5247379360299 1043.52364993586 37.919 2 -0.052635565658795604 0.017052400389532353 0.1713087628048461 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 76342 18053 NPTVFFDI True H1975_Epitope_Rep1 951.4701831820299 951.46963496793 75.221 1 -0.05264584451071012 0.017052400389532353 0.17133324812389372 ['ENSG00000196262|ENST00000468812|PPIA', 'ENST00000355968.10_1_7:44836323-44838373:+|nuORF', 'ENST00000452411.1_1_7:98083525-98083918:-|nuORF'] 77207 16154 NRSRIQVWL True PC9_epitope_Rep1 1170.6621748986997 1170.66052490379 66.951 3 -0.052650823734707225 0.017052400389532353 0.17134510994338692 ['ENSG00000182004|ENST00000414487|SNRPE'] 20180 8973 ENGSLYDY True H1975_Epitope_Rep2 959.38724140371 959.3866949679301 39.47 1 -0.052652228724034945 0.017052400389532353 0.17134845708888835 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 136220 18641 WRSLPLLPV True PC9_epitope_Rep6 1079.64915060351 1079.6480499358602 84.346 2 -0.05265291094850418 0.017052400389532353 0.17135008238596872 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 89647 5347 QYTPHSHQF True PC9_epitope_Rep5 1143.50975657823 1143.50812490379 25.582 3 -0.05269277928636059 0.017052400389532353 0.17144507925477753 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR'] 14817 3611 DVRQTLVGT True NCI_RA007_Epitope_Rep4 987.5349086969098 987.53380993586 19.948 2 -0.05271222043526532 0.017052400389532353 0.17149141474633003 ['ENST00000483350.1_1_3:50085717-50095163:+|nuORF'] 115050 7726 TRDAPLAV True PC9_epitope_Rep2 841.4657665079299 841.46466993586 35.093 2 -0.052746409501866265 0.017052400389532353 0.1715729187887008 ['ENSG00000101407|ENST00000373447|TTI1'] 90296 4288 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 21.609 3 -0.05276977863448194 0.017052400389532353 0.17162864273323822 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 59578 8821 LFVGGIKED True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 41.788 2 -0.05277842942027265 0.017052400389532353 0.17164927345980718 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 44954 17932 IPAALPVAA True PC9_epitope_Rep1 821.50108938749 821.49998993586 73.767 2 -0.05279895075637993 0.017052400389532353 0.1716982196603927 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 1253 14994 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 62.826 1 -0.05280788882323404 0.017052400389532353 0.1717195408712525 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 69998 13877 LVLVGDGG True PC9_epitope_Rep4 728.40685464948 728.40630496793 61.278 1 -0.05280905096851891 0.017052400389532353 0.17172231321779766 ['ENSG00000132341|ENST00000543796|RAN'] 95154 7938 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67870993586 38.333 2 -0.05284864227085642 0.017052400389532353 0.17181677645568494 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 67799 18610 LTAAATLSV True PC9_epitope_Rep6 845.48583324617 845.48528496793 84.226 1 -0.05285312517694698 0.017052400389532353 0.17182747451002672 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 101914 17981 SLPTNLTVAT True PC9_epitope_Rep3 1015.55497543515 1015.55386993586 74.367 2 -0.05287642636994194 0.017052400389532353 0.1718830873497568 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000461757.1_1_2:27424532-27424700:-|nuORF'] 103458 8330 SPPVPGPSA True PC9_epitope_Rep2 807.41266830591 807.41156993586 37.412 2 -0.05292168279581504 0.017069583411016512 0.1719911323919715 ['ENSG00000143756|ENST00000366862|FBXO28'] 128817 11788 VQASHFEGL True PC9_epitope_Rep1 986.4821448480599 986.48104993586 50.213 2 -0.05293546438228423 0.017069583411016512 0.17202404283403305 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 126717 14254 VLPGHFNTF True PC9_epitope_Rep6 1030.5236157372199 1030.5225099358602 66.719 2 -0.052939712201138536 0.017069583411016512 0.17203418741348453 ['ENSG00000176055|ENST00000316610|MBLAC2'] 70116 8205 LVPEQIGK True NCI_RA007_Epitope_Rep1 882.5174677276199 882.51636993586 35.914 2 -0.05297820461097826 0.017069583411016512 0.1721261312664463 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 8888 20720 AVFPSIVG True PC9_epitope_Rep1 788.4432401582 788.44269496793 84.524 1 -0.052982760708382565 0.017069583411016512 0.17213701607243634 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 110987 6014 THAPATLEA True PC9_epitope_Rep5 909.45559574705 909.45448993586 28.127 2 -0.052996445154313176 0.017069583411016512 0.17216971163709083 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 78397 14819 NYLKDGPYI True PC9_epitope_Rep4 1081.54441075145 1081.5433099358602 64.938 2 -0.053042456538845026 0.017069583411016512 0.17227967245214576 ['ENSG00000174231|ENST00000304992|PRPF8'] 5879 6545 APGGFVHSA True PC9_epitope_Rep5 841.40825163181 841.40714993586 30.148 2 -0.053045242157374474 0.017069583411016512 0.17228633108424307 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 120388 3906 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 20.144 2 -0.0530531069292551 0.017069583411016512 0.17230513158022334 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 119896 6087 VDITTPKAA True NCI_RA007_Epitope_Rep4 914.5072969667399 914.50618993586 30.029 2 -0.053054712846818765 0.017069583411016512 0.17230897063252906 ['PSIP1|p.Q447Hfs*21|1|0.19|ENSG00000164985|chr9:15468706-15468709|TCTT/-|frameshift_variant', 'ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000422292.2_1_9:15055292-15055805:+|nuORF'] 102979 21865 SPFFPLVSA True PC9_epitope_Rep4 963.5065686907499 963.50546993586 92.311 2 -0.053089113220707994 0.017088528936575666 0.17239121967815665 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 71287 19761 LYQDGVFKF True PC9_epitope_Rep2 1115.56514619603 1115.56404993586 81.399 2 -0.053096731910851 0.017088528936575666 0.1724094387437132 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 40711 12681 HRTDLNPIL True PC9_epitope_Rep1 1077.59309227937 1077.59198993586 53.649 2 -0.053110285187202386 0.017088528936575666 0.17244185250412827 ['ENST00000498316.3_1_7:28857752-28858893:+|nuORF', 'nc|ENSG00000146592|Q02930-4|CREB5', 'nc|ENSG00000146592|Q02930-3|CREB5', 'nc|ENSG00000146592|Q02930-2|CREB5', 'ENSG00000146592|ENST00000357727|CREB5'] 23976 13975 EYMEHVYLI True NCI_RA007_Epitope_Rep2 1195.5583465634297 1195.55724993586 59.016 2 -0.0531171946835542 0.017088528936575666 0.17245837857193871 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2'] 109048 19089 TAISLFYEL True NCI_RA007_Epitope_Rep3 1055.5539128059902 1055.55280993586 83.38 2 -0.053132859431228786 0.017088528936575666 0.17249584898445916 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 39899 17658 HPFDLGLYNEA True PC9_epitope_Rep6 1274.59315184902 1274.5920499358601 80.56 2 -0.05316813074708073 0.017129600861658278 0.1725802371076442 ['ENSG00000106399|ENST00000223129|RPA3'] 25967 15040 FGANAILGV True H1975_Epitope_Rep3 860.4756029156399 860.4750549679301 63.245 1 -0.05318369397835011 0.01714889298510863 0.17261748089332138 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 96703 11055 SALGYLHSL True NCI_RA007_Epitope_Rep4 959.5076313199099 959.50652993586 49.393 2 -0.053197428987553405 0.01714889298510863 0.17265035374549126 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000477460.6_1_6:134491408-134493948:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF', 'ENST00000474427.6_1_6:134493798-134493948:-|nuORF'] 41636 10638 IAELETEKRD True H1975_Epitope_Rep1 1202.61428121642 1202.6131899358602 45.876 2 -0.05320175425059894 0.01714889298510863 0.17266070646568552 ['ENST00000497858.1_1_1:38027642-38030659:+|nuORF', 'ENST00000467277.1_1_1:38027150-38030659:+|nuORF', 'nc|ENSG00000163879|O14645-2|DNALI1', 'ENSG00000163879|ENST00000652629|DNALI1'] 17667 14234 EHLNYVTEI True PC9_epitope_Rep4 1116.54513902744 1116.5440499358601 62.658 2 -0.05320615201418655 0.01714889298510863 0.17267123311171304 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 75537 7042 NKWCRLWNGP True H1975_Epitope_Rep2 1272.6185958345598 1272.61693490379 32.011 3 -0.053258166563333785 0.01716853746427536 0.17279576702984112 ['ENST00000376552.6_1_9:82227592-82242331:+|nuORF'] 55863 17024 LAPSLALL True H1975_Epitope_Rep2 796.50584041476 796.50529496793 70.738 1 -0.053274036084460796 0.01716853746427536 0.1728337730640011 ['ENST00000338779.10_1_16:70714719-70719815:-|nuORF'] 118609 12545 TYSEKTTLF True PC9_epitope_Rep4 1088.5389910178399 1088.5378899358602 56.073 2 -0.05328953309750149 0.01716853746427536 0.1728708919468454 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 49269 8192 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 36.463 2 -0.053334014581125425 0.017208531787119487 0.17297746253385088 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 103459 8430 SPPVPGPSA True PC9_epitope_Rep2 807.41266830591 807.41156993586 37.795 2 -0.053358306485413974 0.017208531787119487 0.17303567917057916 ['ENSG00000143756|ENST00000366862|FBXO28'] 45267 3560 IPVIREED True PC9_epitope_Rep4 969.51311062317 969.51200993586 19.789 2 -0.05337042966257573 0.017208531787119487 0.1730647374215571 ['ENSG00000141639|ENST00000400384|MAPK4'] 31677 9921 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51727496793 46.108 1 -0.05339558998491876 0.017208531787119487 0.17312505422011035 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 12613 15341 DLAGSIIGK True PC9_epitope_Rep1 872.4967322830399 872.49562993586 63.828 2 -0.053424073452884864 0.017247805201258903 0.1731933532115075 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 103190 20642 SPILTSSTL True PC9_epitope_Rep5 917.5069626135701 917.50641496793 84.452 1 -0.05342675947870429 0.017247805201258903 0.1731997947457285 ['ENST00000544327.1_1_12:125284722-125292339:-|nuORF'] 6031 16508 APLAIPSAA True PC9_epitope_Rep5 809.46470387877 809.46360993586 68.496 2 -0.05349464995480993 0.017247805201258903 0.1733626563179237 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 47813 20495 IYGGTYML True PC9_epitope_Rep1 916.4364405255999 916.43589496793 83.646 1 -0.05349506926178557 0.017247805201258903 0.1733636624807068 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENST00000471972.1_1_X:153668686-153669692:+|nuORF', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 126777 16636 VLPKLYVKL True PC9_epitope_Rep2 1071.7056028504699 1071.7045099358602 69.236 2 -0.05350708666578278 0.017247805201258903 0.17339250079224944 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000471178.2_1_19:35024355-35024547:-|nuORF', 'ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 41613 10085 IADRPLYL True H1975_Epitope_Rep1 959.54401682863 959.54290993586 43.728 2 -0.053529088765543506 0.017247805201258903 0.1734453071508376 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5'] 72847 5813 MPNGTPHPTA True PC9_epitope_Rep3 1021.46511488493 1021.46400993586 27.428 2 -0.053584410383678484 0.017288142611648273 0.1735781260697183 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 132329 21938 VTYPGELLL True PC9_epitope_Rep2 1003.5589981864299 1003.55847496793 89.861 1 -0.05358951432884779 0.017288142611648273 0.17359038302935792 ['ENSG00000146386|ENST00000367660|ABRACL'] 35553 10917 GSVLLSSLLSK True NCI_RA007_Epitope_Rep2 1102.65977485686 1102.6586699358602 47.072 2 -0.05360369014949586 0.017288142611648273 0.17362442859812405 ['NLRP8|p.E1003Gfs*22|1|0.17|ENSG00000179709|chr19:55979525-55979525|A/-|frameshift_variant', 'nc|ENSG00000179709|Q86W28-2|NLRP8', 'ENSG00000179709|ENST00000291971|NLRP8'] 87847 12536 QRGPPIIL True PC9_epitope_Rep6 892.5494365622399 892.54832993586 59.655 2 -0.053662084670323205 0.017307055316329912 0.17376471596223067 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 64294 8088 LPKEDPTAVA True PC9_epitope_Rep2 1039.5549754351498 1039.5538699358601 36.468 2 -0.05367056583750022 0.017307055316329912 0.1737850969668155 ['ENSG00000181789|ENST00000314797|COPG1'] 70278 6815 LVRPPTEQA True PC9_epitope_Rep3 1009.55564414149 1009.55454993586 31.231 2 -0.05370663171617694 0.017307055316329912 0.1738717829189324 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 78736 10393 PAAATVAVA True PC9_epitope_Rep1 769.4334037504899 769.4328549679301 44.861 1 -0.05372827399153953 0.017307055316329912 0.17392381385478434 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 107139 21137 SVIDIINGEA True PC9_epitope_Rep1 1029.5342399905699 1029.5331499358601 86.134 2 -0.05373942694456329 0.017307055316329912 0.17395063078781559 ['ENSG00000168090|ENST00000303904|COPS6'] 25411 8136 FEDESPPAP True H1975_Epitope_Rep1 987.4185415319898 987.4179949679301 36.234 1 -0.053808366156200334 0.01732452962970629 0.17411644940524956 ['ENSG00000105464|ENST00000263269|GRIN2D'] 141930 13150 YVFPGVTRL True H1975_Epitope_Rep2 1050.58621599378 1050.58567496793 55.703 1 -0.053815946314270315 0.01732452962970629 0.1741346877883558 ['ENSG00000160284|ENST00000291672|SPATC1L', 'nc|ENSG00000160284|Q9H0A9-2|SPATC1L'] 77108 7069 NRMDGTYAC True PC9_epitope_Rep3 1029.4008003762099 1029.39970993586 32.2 2 -0.05381718236484436 0.01732452962970629 0.1741376619225821 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 66325 11180 LSFYPLLSF True NCI_RA007_Epitope_Rep5 1085.57973363101 1085.5786299358601 49.638 2 -0.053849166670115 0.01732452962970629 0.17421463209844662 ['ENST00000416382.6_1_10:11375127-11375370:+|nuORF'] 133968 17269 VYINTAQEF True PC9_epitope_Rep4 1083.5236753068698 1083.52256993586 74.43 2 -0.05385227912049075 0.01732452962970629 0.17422212332054093 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 96263 10344 RYQQWMERF True NCI_RA007_Epitope_Rep4 1342.6240751378198 1342.62296993586 46.644 2 -0.05389966706202092 0.01732452962970629 0.17433620374416994 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 120273 13061 VEDEFDLEA True H1975_Epitope_Rep3 1065.4502355830898 1065.4491299358601 55.48 2 -0.053914102663427936 0.01732452962970629 0.17437096472614105 ['nc|ENSG00000163950|Q14493-2|SLBP', 'ENSG00000163950|ENST00000489418|SLBP'] 43211 20534 IFIQNSKLYF True PC9_epitope_Rep1 1271.69140933831 1271.6903099358601 83.797 2 -0.05391665620586046 0.01732452962970629 0.17437711410880288 ['SLC35A5|p.Y300Mfs*8|1|0.19|ENSG00000138459|chr3:112581009-112581009|T/-|frameshift_variant', 'ENSG00000138459|ENST00000492406|SLC35A5'] 412 6210 AALGTDKEL True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 30.495 2 -0.053967505612353465 0.01732452962970629 0.17449959621605324 ['ENSG00000196628|ENST00000354452|TCF4', 'nc|ENSG00000196628|P15884|TCF4', 'nc|ENSG00000196628|P15884-4|TCF4', 'nc|ENSG00000196628|P15884-5|TCF4', 'TCF4|p.Q491Gfs*21|1|0.11|ENSG00000196628|chr18:55234563-55234564|GG/-|frameshift_variant'] 4043 13625 AHGVSLVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 57.699 2 -0.054042800023671365 0.01734307415302469 0.17468105652085023 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 84001 21458 PVSSMESLLL True PC9_epitope_Rep4 1074.5630975907 1074.56200993586 90.728 2 -0.0540579709997503 0.01734307415302469 0.1747176327388825 ['nc|ENSG00000155393|Q7Z4Q2-3|HEATR3', 'nc|ENSG00000155393|Q7Z4Q2-2|HEATR3', 'ENSG00000155393|ENST00000299192|HEATR3'] 92159 10314 RLERGEYVL True PC9_epitope_Rep4 1133.61930702721 1133.61766490379 47.36 3 -0.054059198865692916 0.01734307415302469 0.17472059324783268 ['ENST00000400596.2_1_13:20134155-20134623:-|nuORF'] 35225 15878 GRAPQVLVL True PC9_epitope_Rep1 951.5865503469499 951.5860049679301 65.883 1 -0.05406406839795264 0.01734307415302469 0.17473233448557984 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 29115 16823 FTLGQLIL True H1975_Epitope_Rep2 903.5429541994699 903.54184993586 69.956 2 -0.05407013816151818 0.01734307415302469 0.17474697035479314 ['nc|ENSG00000197847|A6NK97|SLC22A20P'] 130900 5703 VTDDSPKYNY True H1975_Epitope_Rep2 1200.5298828861198 1200.52878993586 26.933 2 -0.054091772777763905 0.01734307415302469 0.17479914348187056 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 46417 4172 ISSPTETER True PC9_epitope_Rep1 1018.49310345458 1018.49200993586 20.945 2 -0.05415720942284678 0.01736197334657727 0.17495700588099647 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11', 'S100A11|p.K3T|1|0.08|ENSG00000163191|chr1:152033796-152033796|T/G|missense_variant'] 107787 17858 SVTFVAEQV True PC9_epitope_Rep2 978.5022115862997 978.50110993586 73.993 2 -0.054160124175030244 0.01736197334657727 0.17496403959752624 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 69333 12334 LTVKENLSL True NCI_RA007_Epitope_Rep4 1015.59136094387 1015.59026993586 54.441 2 -0.05416549883373196 0.01736197334657727 0.17497700987716122 ['ENSG00000154262|ENST00000284425|ABCA6', 'nc|ENSG00000154262|Q8N139-2|ABCA6', 'ABCA9|p.R581S|1|0.1|ENSG00000154258|chr17:69027688-69027688|C/A|missense_variant', 'ENST00000590311.5_1_17:67109638-67111556:-|nuORF', 'ENST00000589803.5_1_17:67102167-67114054:-|nuORF'] 118580 22001 TYQVLAVTF True PC9_epitope_Rep3 1040.5542471591598 1040.5531499358601 89.925 2 -0.054166604275601195 0.01736197334657727 0.174979677634098 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 71778 4505 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 22.448 2 -0.054179903637959284 0.01736197334657727 0.1750117748688173 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 132665 6294 VVGDVAYDEAK True H1975_Epitope_Rep3 1164.5662683948397 1164.56516993586 29.215 2 -0.05419544402781254 0.017382307294361098 0.17504928526572525 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 53082 5014 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 24.318 2 -0.054201933374329055 0.017402640400612505 0.1750649502930634 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 116649 18050 TVASGSEVVL True PC9_epitope_Rep3 960.5127762699999 960.51166993586 74.628 2 -0.054209448202818075 0.01742261215030624 0.1750830918673394 ['nc|ENSG00000256590|A0JD37|TRDV3'] 8636 10293 AVADAVVTA True NCI_RA007_Epitope_Rep4 815.43888305375 815.43833496793 46.447 1 -0.05421616836237854 0.01742261215030624 0.17509931600455603 ['ENSG00000197774|ENST00000568449|EME2', 'nc|ENSG00000197774|A4GXA9-2|EME2'] 47247 13183 IVCDVPSASA True PC9_epitope_Rep4 960.45863252216 960.45752993586 58.606 2 -0.05423936181511874 0.0174407779042102 0.1751553178488588 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 47571 4519 IVVEQMNKYK True NCI_RA007_Epitope_Rep2 1250.66929399474 1250.66818993586 22.209 2 -0.05431851371544589 0.0174407779042102 0.17534651702981272 ['nc|ENSG00000066933|B2RTY4-2|MYO9A', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A'] 7 5245 AAAAAAAAAAA True PC9_epitope_Rep4 799.41881631551 799.41770993586 26.874 2 -0.0543228342470555 0.0174407779042102 0.1753569573766855 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 61357 9870 LISQLVSS True H1975_Epitope_Rep1 845.48583324617 845.48528496793 42.898 1 -0.054331644576189844 0.0174407779042102 0.1753782482729931 ['ENST00000577035.5_1_17:7144758-7144931:-|nuORF'] 104727 3957 SQVEGEHQL True PC9_epitope_Rep4 1025.47778774361 1025.4766899358601 21.439 2 -0.05434918911497092 0.0174407779042102 0.1754206508326989 ['ENSG00000117724|ENST00000366955|CENPF'] 87611 9841 QQPQPLPPP True PC9_epitope_Rep4 1000.5341804209198 1000.53308993586 45.502 2 -0.05436380421476242 0.0174407779042102 0.17545597816477934 ['nc|ENSG00000204540|Q9UIG5-2|PSORS1C1', 'ENSG00000204540|ENST00000259881|PSORS1C1'] 104475 19148 SQLRDYITL True PC9_epitope_Rep2 1107.5924235730301 1107.5913299358601 79.024 2 -0.0543735378755576 0.0174407779042102 0.17547950859560865 ['ENSG00000175595|ENST00000311895|ERCC4'] 89818 10173 RALTVPEL True NCI_RA007_Epitope_Rep3 897.5283667644899 897.52726993586 47.102 2 -0.05441350453531384 0.017458938397252908 0.17557614540309374 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 103828 10266 SPYHNFDSV True PC9_epitope_Rep2 1064.45632402304 1064.4552299358602 44.821 2 -0.054434270664084 0.017458938397252908 0.17562636942541035 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 29436 17996 FVEEEEHFL True PC9_epitope_Rep3 1177.52915461013 1177.52804993586 74.425 2 -0.05446849890427305 0.017458938397252908 0.17570917149747928 ['ENSG00000168159|ENST00000305943|RNF187'] 126577 16213 VLLTGLHAV True PC9_epitope_Rep2 921.5647522732099 921.56364993586 67.61 2 -0.05448471733151549 0.017458938397252908 0.1757484140911729 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 75896 7421 NLQTVNVDEN True NCI_RA007_Epitope_Rep3 1144.53603089572 1144.5349299358602 36.315 2 -0.054506016852966764 0.017458938397252908 0.17579995920053393 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 35442 4818 GSGTAEVELK True H1975_Epitope_Rep1 989.50293986229 989.50184993586 23.607 2 -0.05451514778256586 0.017458938397252908 0.17582205899765127 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 7144 8734 AQYDRQIRL True PC9_epitope_Rep2 1161.6254550368099 1161.62380490379 38.956 3 -0.05454121904946044 0.017458938397252908 0.1758851692357925 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 138148 22098 YGLEKFWAF True PC9_epitope_Rep5 1159.57023157647 1159.56912993586 90.032 2 -0.054621316095907216 0.017519908987485778 0.17607914537360547 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 9236 19820 AVPDEIPPLE True PC9_epitope_Rep2 1078.55464108198 1078.55354993586 81.627 2 -0.054696917925192226 0.017519908987485778 0.17626235512856567 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 40678 12668 HRQWRGPIL True PC9_epitope_Rep3 1161.6519445681697 1161.65029490379 53.753 3 -0.054703376745835225 0.017519908987485778 0.1762780125180268 ['nc|ENSG00000196104|Q9BQ16-9|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-7|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-2|SPOCK3', 'SPOCK3|p.V330Gfs*13|1|0.22|ENSG00000196104|chr4:166742011-166742012|-/C|frameshift_variant', 'nc|ENSG00000196104|Q9BQ16-6|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-4|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-8|SPOCK3', 'ENSG00000196104|ENST00000357545|SPOCK3', 'nc|ENSG00000196104|Q9BQ16|SPOCK3'] 84484 14452 QALLDLHAL True NCI_RA007_Epitope_Rep2 992.5654805492001 992.56438993586 60.877 2 -0.054712124701499935 0.017539868037313586 0.1762992205545239 ['ENSG00000087086|ENST00000331825|FTL'] 86292 17975 QISDTSVVL True PC9_epitope_Rep3 960.51277627 960.51222496793 74.345 1 -0.05475565375680749 0.017539868037313586 0.17640477305861846 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 117985 9196 TYDKGYQF True PC9_epitope_Rep6 1020.45526139388 1020.45416993586 45.505 2 -0.05478165873381196 0.017554016334125917 0.1764678502920977 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 6475 8231 APSGSQGVL True PC9_epitope_Rep2 814.4184819623399 814.41738993586 37.017 2 -0.054799449133643964 0.017554016334125917 0.17651101032339803 ['nc|ENSG00000221978|Q96S94-5|CCNL2', 'nc|ENSG00000221978|Q96S94-2|CCNL2', 'nc|ENSG00000221978|Q96S94-4|CCNL2', 'ENSG00000221978|ENST00000400809|CCNL2'] 118234 19190 TYLDNGVVF True PC9_epitope_Rep6 1026.5022115862998 1026.50110993586 86.466 2 -0.054817295957778386 0.017554016334125917 0.17655431372084263 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 47354 8975 IVGLPNVGK True H1975_Epitope_Rep1 895.5491022090699 895.54800993586 39.427 2 -0.054828326294676426 0.017554016334125917 0.17658108089056263 ['ENSG00000138430|ENST00000284719|OLA1', 'OLA1|p.G26V|1|0.22|ENSG00000138430|chr2:174246739-174246739|C/A|missense_variant', 'nc|ENSG00000138430|Q9NTK5-3|OLA1'] 119561 19708 VATDFFTVL True NCI_RA007_Epitope_Rep2 1011.5276980581499 1011.52717496793 81.609 1 -0.05488071223870634 0.017554016334125917 0.1767082389930947 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 109294 21003 TAVPSLFSV True PC9_epitope_Rep4 919.50148331031 919.50038993586 88.95 2 -0.054884956627103465 0.017554016334125917 0.1767185439829932 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 45389 16463 IQEETVAEL True PC9_epitope_Rep1 1030.5182555732597 1030.51714993586 68.15 2 -0.05489702229779426 0.017554016334125917 0.17674784034087362 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 4962 19034 ALGLAISLD True PC9_epitope_Rep1 871.50148331031 871.50038993586 78.005 2 -0.05490134578373424 0.017554016334125917 0.1767583388122728 ['ENSG00000183751|ENST00000568546|TBL3'] 1758 12612 AEGSEFWSA True H1975_Epitope_Rep2 982.4032258210199 982.40267496793 53.609 1 -0.054968160138211875 0.017554016334125917 0.17692062865696653 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'CAPN2|p.S303Lfs*2|1|0.23|ENSG00000162909|chr1:223752002-223752011|CAAGCTGGAA/-|frameshift_variant'] 128636 10179 VPVDTGVAA True PC9_epitope_Rep5 827.4388830537498 827.43833496793 44.141 1 -0.054975942215166294 0.017554016334125917 0.1769395369744326 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 74242 7262 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4601949679301 32.868 1 -0.054985712540957896 0.017554016334125917 0.17696327793867236 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 48203 20217 IYPTTYVQF True PC9_epitope_Rep4 1130.56481184286 1130.56427496793 85.904 1 -0.054993576942684586 0.017554016334125917 0.17698238910045494 ['ENSG00000179820|ENST00000391770|MYADM'] 116592 6018 TVADHIQKV True PC9_epitope_Rep3 1009.5556441414899 1009.55454993586 28.202 2 -0.055004330052774476 0.017554016334125917 0.17700852210637932 ['ENSG00000181789|ENST00000314797|COPG1'] 506 5719 AAPAEEPAAAA True PC9_epitope_Rep4 967.4610750503098 967.45996993586 28.82 2 -0.055077219613204074 0.017554016334125917 0.1771857257932798 ['ENSG00000277443|ENST00000612661|MARCKS'] 98921 15391 SHADVVNLL True PC9_epitope_Rep4 966.51344497634 966.51289496793 67.134 1 -0.05510517505613468 0.017554016334125917 0.17725371768888115 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 110193 6073 TEQEVAQVA True H1975_Epitope_Rep3 973.4716397340098 973.47054993586 28.372 2 -0.05515305470587207 0.017554016334125917 0.1773702052478283 ['ENSG00000196878|ENST00000356082|LAMB3'] 37084 21505 GVPQALFGV True PC9_epitope_Rep5 886.4912529797799 886.49070496793 87.754 1 -0.05520286260560171 0.017554016334125917 0.17749143361128453 ['ENSG00000010292|ENST00000315579|NCAPD2'] 85434 12538 QEYFGSLAA True H1975_Epitope_Rep3 984.4552613938797 984.45416993586 53.427 2 -0.05520839484120219 0.017554016334125917 0.17750490173679345 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 117609 20604 TVTDSMFAV True PC9_epitope_Rep3 969.4477334852899 969.44662993586 84.521 2 -0.05522625298270072 0.017572875749431466 0.1775483813032357 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 47258 20122 IVCTWYCSI True PC9_epitope_Rep2 1086.48782447546 1086.48672993586 82.809 2 -0.05523983863736834 0.017572875749431466 0.17758146290910248 ['nc|ENSG00000139880|Q86UP0-3|CDH24'] 83580 16440 PVAPAVPTV True PC9_epitope_Rep5 849.49600400705 849.49490993586 68.234 2 -0.05524047873976434 0.017572875749431466 0.1775830216763784 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 96103 7324 RYMPQNPHI True PC9_epitope_Rep4 1154.5654976325397 1154.5638449037901 35.5 3 -0.055245861701466815 0.017572875749431466 0.17759613050984133 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 36139 19209 GVAPGFQVV True PC9_epitope_Rep2 872.4756029156399 872.4750549679301 79.26 1 -0.05524883806848316 0.017572875749431466 0.177603378947484 ['ENSG00000165724|ENST00000298585|ZMYND19'] 134463 10896 VYPPPHQVF True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 52.774 2 -0.05532420646635394 0.01761313129224981 0.17778698598594284 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 98947 7444 SHANSAVVL True PC9_epitope_Rep3 896.47158016436 896.47048993586 33.639 2 -0.05535862452820763 0.01761313129224981 0.1778708712174222 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 29113 22603 FTLGDIAQL True PC9_epitope_Rep2 976.5229470308798 976.52184993586 92.443 2 -0.055386308931160276 0.01761313129224981 0.17793836236330482 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 43651 13179 IHDFQPHVI True PC9_epitope_Rep3 1104.5716285588 1104.5705299358601 55.726 2 -0.055415543597808675 0.01763015935349193 0.17800964978398978 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 90356 4361 REFTDSAEA True NCI_RA007_Epitope_Rep5 1024.4461532621597 1024.4450499358602 23.388 2 -0.05541639762621295 0.01763015935349193 0.17801173255520408 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL'] 35607 14347 GTASGFYTV True PC9_epitope_Rep6 901.4181476091701 901.41704993586 67.083 2 -0.05541952725823239 0.01763015935349193 0.17801936510668648 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 140252 10516 YRAPEAEL True PC9_epitope_Rep5 947.4712458111899 947.47014993586 45.437 2 -0.055425889192539775 0.01763015935349193 0.17803488121615027 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1', 'nc|ENSG00000152332|Q8TAS1-2|UHMK1', 'ENSG00000152332|ENST00000489294|UHMK1'] 86985 3913 QLYWSHPRK True NCI_RA007_Epitope_Rep3 1213.6356257976897 1213.63399490379 21.701 3 -0.05542703051367892 0.01763015935349193 0.17803766486919 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 14058 7609 DRNLQVSL True PC9_epitope_Rep1 943.50869394907 943.50758993586 34.088 2 -0.05543673657602387 0.01763015935349193 0.17806133877744684 ['ENSG00000142959|ENST00000372207|BEST4', 'ENST00000524877.5_1_11:61726936-61727579:+|nuORF', 'nc|ENSG00000127325|Q8N1M1-1|BEST3', 'nc|ENSG00000127325|Q8N1M1-5|BEST3', 'BEST1|p.N428Tfs*54|1|0.4|ENSG00000167995|chr11:61962430-61962430|C/-|frameshift_variant', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000167995|ENST00000378043|BEST1', 'ENSG00000127325|ENST00000330891|BEST3', 'nc|ENSG00000167995|O76090-3|BEST1'] 34236 12076 GNPSYNMYEVY True H1975_Epitope_Rep2 1335.54415305127 1335.5430499358602 51.532 2 -0.05549469921754627 0.01763015935349193 0.17820275445414194 ['LRP1B|p.D4501Y|1|0.15|ENSG00000168702|chr2:140238211-140238211|C/A|missense_variant'] 85437 12737 QEYFGSLAA True NCI_RA007_Epitope_Rep5 984.4552613938797 984.45416993586 55.658 2 -0.055506550695232096 0.01763015935349193 0.17823167778004226 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 25687 8795 FEQKGFRLV True H1975_Epitope_Rep3 1122.6185787512197 1122.61748993586 38.836 2 -0.05551576438676906 0.01763015935349193 0.17825416560787322 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF'] 64898 9770 LQEDPPAGV True PC9_epitope_Rep6 924.4552613938798 924.45416993586 48.02 2 -0.055523226235531006 0.01763015935349193 0.17827237898363882 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 9657 13257 AYEHKFYEI True PC9_epitope_Rep1 1198.5658744720197 1198.56421490379 55.859 3 -0.0555398582728373 0.017649368632070596 0.1783129796383356 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 47924 13783 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.6890249037901 57.863 3 -0.05554040958392236 0.017649368632070596 0.1783143255463801 ['ENSG00000103479|ENST00000262133|RBL2'] 116416 5313 TTISKVSQV True PC9_epitope_Rep6 961.5444107514498 961.54330993586 28.268 2 -0.05556622783723925 0.017649368632070596 0.17837736220832703 ['ENSG00000065183|ENST00000349139|WDR3'] 106547 4348 STLTYRMTK True NCI_RA007_Epitope_Rep3 1099.5695799534699 1099.56848993586 23.854 2 -0.055590110746414644 0.017649368632070596 0.17843568568923437 ['ENST00000446662.5_1_16:22466144-22470768:+|nuORF', 'ENST00000522841.6_1_16:21490806-21495758:-|nuORF'] 107947 15752 SVWTKVEGV True PC9_epitope_Rep5 1003.5338460677498 1003.53274993586 65.589 2 -0.05563801543043089 0.01766857473497138 0.1785527067242331 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 58793 10485 LESLHSFVA True H1975_Epitope_Rep2 1001.51819600361 1001.51708993586 45.348 2 -0.05567183008811665 0.01766857473497138 0.17863533688250205 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 53419 5556 KQYAGKYVL True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 28.057 2 -0.05567387456265088 0.01766857473497138 0.1786403335454711 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 52839 11210 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54346496793 48.445 1 -0.05571268544065441 0.01766857473497138 0.17873520282169328 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 137632 6044 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.3765249679301 28.262 1 -0.055909470092621795 0.01768193179236124 0.17921669406148744 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 24612 16814 FAIPLIEKL True NCI_RA007_Epitope_Rep4 1042.64266824074 1042.6415699358602 72.854 2 -0.055932449730832265 0.01768193179236124 0.17927297176469717 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 79483 6554 PAYHSSLMD True NCI_RA007_Epitope_Rep5 1019.43823143075 1019.43712993586 31.872 2 -0.055954344576258405 0.01768193179236124 0.17932660276048587 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 54099 17706 KVLNELTQL True PC9_epitope_Rep3 1056.6179100448799 1056.6168099358601 73.302 2 -0.05597694019090299 0.01768193179236124 0.1793819604842843 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 104101 21144 SQDYPTLAF True PC9_epitope_Rep5 1040.48147614172 1040.48097496793 86.391 1 -0.055998350026591245 0.01768193179236124 0.1794344226958177 ['ENSG00000134697|ENST00000373062|GNL2'] 6032 14653 APLAIPSAA True PC9_epitope_Rep6 809.46470387877 809.46360993586 68.283 2 -0.05599845518558528 0.01768193179236124 0.17943468039817764 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 21398 5804 ERIMKAQAL True PC9_epitope_Rep2 1058.5906497512199 1058.58954993586 27.719 2 -0.05603920323254913 0.01768193179236124 0.1795345543571532 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 8313 17920 ATINEVVQV True PC9_epitope_Rep5 971.52876068731 971.52821496793 73.947 1 -0.056061283613929404 0.01768193179236124 0.17958868772345396 ['ENSG00000171940|ENST00000371471|ZNF217'] 127730 12373 VPAPSPLSA True PC9_epitope_Rep4 837.45961849833 837.4590749679301 55.399 1 -0.05606617839618329 0.01768193179236124 0.1796006893564895 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 77267 11152 NSATGVPTV True PC9_epitope_Rep3 844.42904664604 844.4284949679301 47.896 1 -0.05608547878756341 0.01768193179236124 0.1796480171851354 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 104950 14840 SRDEYYHLL True PC9_epitope_Rep5 1194.56693710118 1194.56530490379 62.084 3 -0.05610779469422674 0.01768193179236124 0.17970274899418998 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 86139 17719 QIDGTLSTI True PC9_epitope_Rep1 946.49712620586 946.4965749679301 72.951 1 -0.056131766433356385 0.01768193179236124 0.17976155314577172 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 125834 11454 VLADVIDN True H1975_Epitope_Rep3 857.44944773745 857.4488949679301 49.177 1 -0.05613653278900714 0.01768193179236124 0.17977324669967754 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 108095 20391 SYATLLHVL True PC9_epitope_Rep2 1015.5702315764698 1015.56912993586 83.859 2 -0.05613722832641278 0.01768193179236124 0.17977495313715308 ['ENSG00000183840|ENST00000329321|GPR39'] 23614 18610 EWLSFGHKF True PC9_epitope_Rep5 1149.56072952193 1149.55909490379 76.608 3 -0.0561382752900263 0.01768193179236124 0.17977752178523448 ['ENSG00000133812|ENST00000256190|SBF2'] 45543 8023 IQRQETISL True NCI_RA007_Epitope_Rep5 1086.6033226099 1086.6022299358601 37.551 2 -0.05613956431165727 0.01768193179236124 0.17978068433538374 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 4503 6100 AKAPPTACY True PC9_epitope_Rep5 920.4425885352 920.44148993586 28.452 2 -0.05613977087429776 0.01768193179236124 0.17978119112963373 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB', 'nc|ENSG00000172216|P17676-3|CEBPB'] 133611 10582 VYADQPHIF True NCI_RA007_Epitope_Rep4 1088.52909504048 1088.5279899358602 47.547 2 -0.05618297794312412 0.01768193179236124 0.17988721720428652 ['ENSG00000100439|ENST00000428304|ABHD4'] 54122 16375 KVPEIEVTV True PC9_epitope_Rep1 1012.5804619069999 1012.57936993586 67.808 2 -0.056191175111459594 0.01768193179236124 0.17990733655852964 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 114753 8914 TQKSLSLSLG True NCI_RA007_Epitope_Rep5 1032.5815245361598 1032.5804299358601 40.95 2 -0.0562731713190224 0.01768193179236124 0.18010866532770892 ['nc|ENSG00000211892|P01861-1|IGHG4'] 133243 7959 VVTGGVQSV True PC9_epitope_Rep6 844.4654321547599 844.46432993586 40.068 2 -0.05633434000387741 0.017701125684188784 0.1802589442320721 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 85150 2703 QEMQEVQSSR True PC9_epitope_Rep1 1220.5455500336 1220.54444993586 14.816 2 -0.05634548730104643 0.017701125684188784 0.18028633902966232 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 125184 16587 VIIDDHPEVTV True PC9_epitope_Rep1 1235.63976768827 1235.6386699358602 68.627 2 -0.05634667004758804 0.017701125684188784 0.18028924581059236 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 37087 19465 GVPQALFGV True PC9_epitope_Rep6 886.4912529797799 886.49014993586 87.536 2 -0.05635823625802458 0.017701125684188784 0.1803176730412003 ['ENSG00000010292|ENST00000315579|NCAPD2'] 90342 4695 REFGNPNRPVA True NCI_RA007_Epitope_Rep4 1255.64216773011 1255.64106993586 24.485 2 -0.056364155329559754 0.017717023209713387 0.18033222188176387 ['ENSG00000007520|ENST00000007390|TSR3'] 43332 18551 IFYGSILSI True PC9_epitope_Rep1 1011.56408356687 1011.56298993586 76.146 2 -0.05636604600143192 0.017717023209713387 0.18033686922718026 ['OR6N1|p.M258I|1|0.17|ENSG00000197403|chr1:158765909-158765909|C/A|missense_variant'] 4042 13535 AHGVSLVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 57.355 2 -0.05638086498927023 0.017717023209713387 0.1803732973900776 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 139985 4310 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 22.997 2 -0.05638764810386272 0.017717023209713387 0.1803899731864311 ['ENSG00000146648|ENST00000275493|EGFR'] 18070 13814 EIGPFQLEP True H1975_Epitope_Rep2 1028.5178616504397 1028.51676993586 58.282 2 -0.05645173832694739 0.017717023209713387 0.18054758042049088 ['ENSG00000131381|ENST00000253699|RBSN'] 25415 8274 FEDESPPAP True H1975_Epitope_Rep3 987.4185415319898 987.41744993586 36.807 2 -0.056463587415947494 0.017717023209713387 0.18057672818697598 ['ENSG00000105464|ENST00000263269|GRIN2D'] 87231 15465 QPLGTLPQA True PC9_epitope_Rep3 923.5076313199098 923.50652993586 64.638 2 -0.056479461885448036 0.017717023209713387 0.18061578251409902 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 87150 10936 QPFAVPHSA True PC9_epitope_Rep1 952.4766655447999 952.47556993586 46.953 2 -0.05649865298697081 0.017717023209713387 0.18066300323249687 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF', 'ENST00000556516.1_1_14:71517389-71527455:+|nuORF', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 134059 9599 VYKDHQTITI True PC9_epitope_Rep3 1216.6451874218799 1216.6435349037902 41.874 3 -0.056529340350096664 0.017717023209713387 0.1807385266254935 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 120739 4421 VEKPVGVAA True H1975_Epitope_Rep2 868.5018176634799 868.50072993586 22.113 2 -0.05654412527419818 0.017717023209713387 0.18077492000191756 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'ENST00000562659.1_1_16:85698640-85699994:+|nuORF'] 103619 12523 SPTGGFVDA True PC9_epitope_Rep3 849.3868474808899 849.38574993586 53.194 2 -0.05656805444392471 0.017717023209713387 0.18083383150522783 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 89806 19538 RALLLGAL True PC9_epitope_Rep1 825.5436229058099 825.54252993586 79.975 2 -0.05659015698836833 0.017717023209713387 0.18088825632981187 ['ENST00000525095.2_1_11:134094621-134094950:+|nuORF', 'ENST00000281187.9_1_11:134094584-134094950:+|nuORF'] 10044 19780 AYSLTYNTI True PC9_epitope_Rep3 1044.5127762700001 1044.51166993586 81.314 2 -0.05662996867917622 0.017717023209713387 0.1809863127505991 ['ENSG00000130766|ENST00000253063|SESN2'] 28761 9315 FSSPSVHNV True PC9_epitope_Rep5 972.4664947839201 972.46538993586 40.784 2 -0.05666619793126581 0.017729618163054697 0.1810755735199085 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'MUC4|p.L101V|1|0.09|ENSG00000145113|chr3:195791279-195791279|G/C|missense_variant'] 9962 8813 AYNPNTQTF True NCI_RA007_Epitope_Rep5 1054.4719740871801 1054.47086993586 40.564 2 -0.05666819099748125 0.017729618163054697 0.1810804847608947 ['ENSG00000174405|ENST00000442234|LIG4'] 134250 14382 VYNENLVHM True PC9_epitope_Rep1 1117.52262976105 1117.5215299358601 60.144 2 -0.05666921355663796 0.017729618163054697 0.1810830045450702 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 142300 11839 YYDKHFTEF True PC9_epitope_Rep4 1248.54513902744 1248.5440499358601 53.312 2 -0.056700369632049004 0.017729618163054697 0.1811597893176163 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 17811 6267 EHSTEGSVSL True PC9_epitope_Rep4 1044.47236801 1044.4712699358602 31.158 2 -0.056798861881306395 0.017729618163054697 0.18140265479444304 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 7038 6036 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep5 935.4348606187698 935.43376993586 29.899 2 -0.05680148401557382 0.017729618163054697 0.18140912322612443 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 5695 9575 APAKSLVGQVA True PC9_epitope_Rep3 1039.6025943339098 1039.6014899358602 41.781 2 -0.05681244023975347 0.017729618163054697 0.18143615217695283 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 77209 16039 NRSRIQVWL True PC9_epitope_Rep5 1170.6621748986997 1170.66052490379 66.683 3 -0.05683948597633349 0.017729618163054697 0.181502884283664 ['ENSG00000182004|ENST00000414487|SNRPE'] 58894 6631 LETAVGAA True H1975_Epitope_Rep2 730.3861192049 730.3855749679301 30.414 1 -0.056845555302539895 0.017729618163054697 0.18151786165241604 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 118472 20690 TYPNTYIF True PC9_epitope_Rep2 1017.48074786573 1017.47964993586 85.019 2 -0.05687264169080282 0.017729618163054697 0.18158471223914255 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 131233 21329 VTEVELLLY True H1975_Epitope_Rep1 1077.5957776179698 1077.59527496793 88.604 1 -0.05689285688287233 0.017729618163054697 0.18163461404537665 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 102661 18601 SLYGGTITI True PC9_epitope_Rep6 923.49639792987 923.4958449679301 84.192 1 -0.056893826700368924 0.017729618163054697 0.18163700827689253 ['ENSG00000155827|ENST00000389120|RNF20', 'RNF20|p.Q440Sfs*14|1|0.08|ENSG00000155827|chr9:101551726-101551727|-/T|frameshift_variant'] 111057 13112 THDGSILIV True PC9_epitope_Rep6 953.51819600361 953.51708993586 62.054 2 -0.05690413831897563 0.017729618163054697 0.18166246620538004 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 9444 14645 AVVESMVTA True PC9_epitope_Rep1 905.4528188657299 905.4522749679301 61.154 1 -0.05691973093542013 0.017729618163054697 0.18170096626019766 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 55575 8004 LAHAAFSAA True PC9_epitope_Rep5 857.43955176009 857.43844993586 35.726 2 -0.05692325571009853 0.017729618163054697 0.18170967003713848 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 62141 15207 LLEGSEIYL True H1975_Epitope_Rep2 1035.54882742555 1035.54827496793 63.649 1 -0.0569328700156138 0.017729618163054697 0.18173341205922136 ['ENST00000581386.5_1_17:26684693-26686548:+|nuORF', 'ENST00000483505.6_1_17:26684735-26687632:+|nuORF', 'ENSG00000244045|ENST00000292114|TMEM199'] 62388 16247 LLGPTVML True H1975_Epitope_Rep3 842.4935614789 842.4930149679301 67.95 1 -0.05693782521054838 0.017729618163054697 0.1817456493834877 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 93487 7535 RQITNEAL True PC9_epitope_Rep2 943.5086939490699 943.50758993586 34.35 2 -0.05694604697741053 0.017729618163054697 0.18176595491392464 ['ABCB11|p.G937R|1|0.13|ENSG00000073734|chr2:168936235-168936235|C/G|missense_variant'] 55611 18839 LAIGASFTV True PC9_epitope_Rep6 877.49091862661 877.49037496793 85.108 1 -0.05696895077192057 0.017729618163054697 0.18182252828020165 ['nc|ENSG00000104635|Q15043-3|SLC39A14', 'nc|ENSG00000104635|Q15043-2|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 47757 15161 IYEPLHTHW True PC9_epitope_Rep5 1194.5821932425 1194.58054490379 63.323 3 -0.05699274338552249 0.017729618163054697 0.1818813083141601 ['ENSG00000182749|ENST00000675840|PAQR7'] 104530 9797 SQPEKVYTL True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 43.022 2 -0.057010613512042015 0.017729618163054697 0.18192546428425418 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 54304 14651 KYAMMFAEL True NCI_RA007_Epitope_Rep5 1102.51912460374 1102.51802993586 63.023 2 -0.057019847959775855 0.017729618163054697 0.18194828456290568 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 89808 19433 RALLLGAL True PC9_epitope_Rep5 825.5436229058099 825.54252993586 79.799 2 -0.05703857951340302 0.01774769383164455 0.18199457950573839 ['ENST00000525095.2_1_11:134094621-134094950:+|nuORF', 'ENST00000281187.9_1_11:134094584-134094950:+|nuORF'] 53206 9084 KQELLEALTK True NCI_RA007_Epitope_Rep1 1171.68123857743 1171.68014993586 39.334 2 -0.057078309040905384 0.01774769383164455 0.18209279434208184 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 107391 22072 SVLLLNPAL True PC9_epitope_Rep1 938.58006798418 938.57896993586 89.709 2 -0.0570888302613397 0.01774769383164455 0.18211880906097735 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 19451 7503 ELNITAAK True PC9_epitope_Rep3 858.4810822188999 858.47998993586 33.863 2 -0.05709256589761506 0.01774769383164455 0.1821280463160969 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 47552 18589 IVTNFLAGFEA True H1975_Epitope_Rep1 1180.61282466444 1180.61172993586 77.516 2 -0.05713364587100172 0.01774769383164455 0.18222964501304226 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43664250-43664349:-|nuORF'] 138119 16788 YGIENEVFL True H1975_Epitope_Rep1 1082.52842633414 1082.5278749679298 69.976 1 -0.05716822616181151 0.01774769383164455 0.18231519521062772 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 136334 11332 WTDGSTLQY True H1975_Epitope_Rep1 1069.47163973401 1069.47107496793 48.567 1 -0.0572117877658154 0.01774769383164455 0.1824229992356653 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 8526 18280 ATSVTFVGV True PC9_epitope_Rep4 879.4701831820299 879.46963496793 78.384 1 -0.0572518799513209 0.017767964010070577 0.18252225124334828 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 133676 21974 VYAPPVGGFSF True PC9_epitope_Rep3 1139.56514619603 1139.56457496793 89.824 1 -0.05726427331568431 0.01778713218604267 0.18255293877060397 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 35454 9382 GSHSMRYFFT True H1975_Epitope_Rep3 1231.5444278347898 1231.54279490379 41.089 3 -0.057265841378809995 0.01778713218604267 0.182556821713301 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 78471 16314 NYNDFGNY True PC9_epitope_Rep5 1005.3828247296099 1005.38172993586 67.748 2 -0.05726989744407177 0.01778713218604267 0.18256686584382706 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 520 18290 AAPGVDLTQLL True H1975_Epitope_Rep2 1096.61282466444 1096.61172993586 75.838 2 -0.05729975239688934 0.01778713218604267 0.18264080660827978 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 124492 6786 VGVNGFGR True PC9_epitope_Rep6 804.4242360491198 804.42312993586 34.924 2 -0.05730197124385106 0.017827665896335426 0.18264630267202767 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 83670 9508 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43308993586 41.542 2 -0.05730615005225511 0.017827665896335426 0.1826566538127546 ['ENSG00000168143|ENST00000306858|FAM83B'] 108182 13267 SYGDLKNAI True PC9_epitope_Rep5 979.49746055903 979.49636993586 56.042 2 -0.0573133056985688 0.017842777285010006 0.18267437956649943 ['nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5', 'ENST00000554465.5_1_14:70237039-70238175:+|nuORF', 'ENST00000554929.1_1_14:70237619-70238175:+|nuORF'] 20305 12992 ENTLQLVRNI True H1975_Epitope_Rep1 1198.6669854956199 1198.6658899358602 55.054 2 -0.057314648093022724 0.017842777285010006 0.18267770502136252 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 138719 20016 YIPTELDQV True PC9_epitope_Rep1 1076.53899101784 1076.53847496793 81.817 1 -0.05731490376518715 0.017842777285010006 0.18267833839092482 ['ENSG00000149100|ENST00000531120|EIF3M'] 35635 17151 GTDGFVINL True PC9_epitope_Rep4 934.47599683846 934.47544496793 73.978 1 -0.05731944146903814 0.017842777285010006 0.18268957973873798 ['ENSG00000100079|ENST00000215886|LGALS2'] 87337 7425 QPRYPVNSV True PC9_epitope_Rep4 1058.55089311422 1058.5497899358602 35.91 2 -0.057346124402557604 0.017842777285010006 0.18275569034513564 ['ENSG00000120438|ENST00000321394|TCP1'] 116518 16041 TTSDIDYAL True PC9_epitope_Rep6 997.46040634397 997.45930993586 74.026 2 -0.05735029144495432 0.017842777285010006 0.18276601606049778 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 35106 14814 GQVPPLQSV True PC9_epitope_Rep5 923.50763131991 923.50652993586 61.982 2 -0.0573919121900714 0.017842777285010006 0.1828691693762109 ['ENSG00000106351|ENST00000300176|AGFG2'] 48239 7788 IYQKAFEHL True NCI_RA007_Epitope_Rep4 1147.6025943339098 1147.60093490379 36.638 3 -0.0573998454988351 0.017842777285010006 0.18288883535010872 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 78850 19508 PAEPAFLA True PC9_epitope_Rep3 814.4225047136199 814.4219549679301 80.269 1 -0.05747009340134412 0.017842777285010006 0.18306302921779932 ['ENSG00000163807|ENST00000296121|KIAA1143'] 138602 8125 YIDQEELNK True PC9_epitope_Rep1 1150.5506183307 1150.5495299358602 36.082 2 -0.05748537689391559 0.017842777285010006 0.1831009409346652 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 120198 10144 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.49530993586 44.018 2 -0.0574983106167049 0.017842777285010006 0.18313302757900912 ['ENSG00000162231|ENST00000294172|NXF1'] 118303 14704 TYLSIIHSL True NCI_RA007_Epitope_Rep4 1045.58079626017 1045.5796899358602 63.979 2 -0.05752806286352083 0.017842777285010006 0.1832068513125636 ['ENSG00000133030|ENST00000651222|MPRIP'] 135071 6222 WEDDKVTEA True H1975_Epitope_Rep2 1091.4771190372699 1091.4760299358602 28.897 2 -0.05753821524607162 0.017842777285010006 0.18323204633566845 ['ENSG00000144224|ENST00000272638|UBXN4'] 139846 6437 YPNSGSVSA True PC9_epitope_Rep4 880.39266113732 880.39156993586 31.855 2 -0.057575505654473336 0.017842777285010006 0.18332460728065472 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 45043 10013 IPGTGFTVDA True PC9_epitope_Rep1 976.4865615221598 976.48546993586 43.381 2 -0.057579887761304224 0.017842777285010006 0.18333548623707088 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 1859 12198 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.48512993586 52.002 2 -0.057582410616642724 0.017860825805387122 0.1833417496179726 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 26325 9691 FHNTEVEAM True PC9_epitope_Rep3 1076.45969515132 1076.4585899358601 42.225 2 -0.05760118437877722 0.017860825805387122 0.18338836244120946 ['ENSG00000198730|ENST00000361367|CTR9'] 121435 14232 VEWDYKLVP True NCI_RA007_Epitope_Rep5 1147.5913609438699 1147.59026993586 61.434 2 -0.05760899841692606 0.017860825805387122 0.18340776578536577 ['ENSG00000162654|ENST00000355754|GBP4'] 23450 13632 EVTINQSLL True H1975_Epitope_Rep1 1015.55497543515 1015.55386993586 57.567 2 -0.0576472970455097 0.017860825805387122 0.18350288444308774 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT3|p.V305*|1|0.36|ENSG00000186442|chr12:52793177-52793177|C/-|frameshift_variant', 'KRT6A|p.V140I|1|0.25|ENSG00000205420|chr12:52492771-52492771|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'CON__P50446', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 35345 8157 GRTTGIVM True PC9_epitope_Rep1 833.44292288837 833.44182993586 36.206 2 -0.057657363762605426 0.017860825805387122 0.18352789110598783 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000415776.1_1_Y:19869357-19869702:-|nuORF', 'ACTA1|p.L155M|1|0.51|ENSG00000143632|chr1:229432423-229432423|G/T|missense_variant', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 76925 10303 NRDQYSHLL True PC9_epitope_Rep1 1144.56252042708 1144.5614299358601 44.515 2 -0.05772836741547248 0.017860825805387122 0.18370432890469557 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 2617 8140 AERSRAERRWP True NCI_RA007_Epitope_Rep2 1412.7385277264398 1412.73688490379 36.297 3 -0.05773225558560194 0.017860825805387122 0.18371399360297663 ['ENST00000322659.12_1_X:54069115-54069579:-|nuORF', 'ENST00000338154.10_1_X:54069115-54070263:-|nuORF'] 21596 19052 ERQRWLVAL True PC9_epitope_Rep3 1169.6669259259697 1169.66527490379 78.506 3 -0.057783757806758554 0.01788071275367101 0.18384203979310035 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 2644 8970 AESKQYFEQY True H1975_Epitope_Rep2 1291.57208205127 1291.57098993586 39.457 2 -0.05780810941828284 0.01788071275367101 0.183902602056609 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 4565 9701 AKLRLEVNL True NCI_RA007_Epitope_Rep5 1054.6498788795 1054.6487899358601 43.951 2 -0.057882872461868504 0.01791974264857508 0.1840886119108603 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 840 5124 ADALESPASP True H1975_Epitope_Rep3 956.445090633 956.44454496793 24.819 1 -0.057928920239651356 0.01791974264857508 0.18420323452866083 ['MFHAS1|p.Q787Lfs*54|1|0.11|ENSG00000147324|chr8:8890696-8890699|TACT/-|frameshift_variant', 'ENSG00000147324|ENST00000276282|MFHAS1'] 68772 12325 LTLHNLEK True PC9_epitope_Rep3 966.5498304850599 966.54872993586 52.435 2 -0.057931383610099994 0.01791974264857508 0.18420936758176645 ['ENSG00000139719|ENST00000267199|VPS33A'] 24904 16971 FAYGYIEDL True H1975_Epitope_Rep2 1089.50187723313 1089.50137496793 70.525 1 -0.05795586830919629 0.01791974264857508 0.18427033378789703 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 30880 10132 GAPQVVAVTG True PC9_epitope_Rep3 897.4919812557698 897.49088993586 43.924 2 -0.05798856432559882 0.01791974264857508 0.18435176479301082 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 72938 13630 MPYSGMTGA True PC9_epitope_Rep5 913.36737498961 913.36682496793 57.45 1 -0.05799294654851997 0.01791974264857508 0.1843626805687306 ['ENSG00000111816|ENST00000606080|FRK', 'nc|ENSG00000111816|P42685-2|FRK'] 72942 16566 MQAERIFSEV True PC9_epitope_Rep4 1208.5859582936 1208.58486993586 71.696 2 -0.05802475304915329 0.017939993813795237 0.18444191968691082 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 111445 7990 THTQPGVQL True PC9_epitope_Rep5 979.5086939490698 979.50758993586 35.672 2 -0.058042911275887836 0.017975304570097505 0.18448716618523836 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 28645 15232 FSLPHVGYL True H1975_Epitope_Rep2 1031.54401682863 1031.54290993586 63.747 2 -0.058081644482685255 0.017975304570097505 0.18458370343627065 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 8280 21638 ATIFDLSEV True PC9_epitope_Rep4 993.5018772331299 993.50078993586 91.423 2 -0.05809674070023551 0.017975304570097505 0.18462133689576862 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 4045 12951 AHGVSLVL True PC9_epitope_Rep4 794.46503823194 794.46394993586 57.705 2 -0.05811837650613131 0.017975304570097505 0.18467528094666322 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 101484 24566 SLLDELLEV True PC9_epitope_Rep5 1029.55939210925 1029.55828993586 99.608 2 -0.058140900511324506 0.017975304570097505 0.18473144954693257 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 71386 19164 LYSEVDVHF True PC9_epitope_Rep5 1107.52367530687 1107.52256993586 78.751 2 -0.05814256103088247 0.017975304570097505 0.18473559082520774 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 91979 8754 RKQMVIDVL True NCI_RA007_Epitope_Rep3 1100.6375999436398 1100.6365099358602 41.524 2 -0.05816288966264885 0.017975304570097505 0.18478629423262774 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 106884 19066 SVDEVEISV True PC9_epitope_Rep1 975.4760564081099 975.4755049679301 78.128 1 -0.058164530649169585 0.017975304570097505 0.18479038752296234 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000556963.5_1_14:77924568-77929110:+|nuORF'] 24814 19490 FAVALPQLL True H1975_Epitope_Rep3 970.5851533646198 970.5846049679301 81.684 1 -0.058209637742491466 0.017975304570097505 0.1849029242719566 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 72990 18350 MQNKSVFIL True PC9_epitope_Rep1 1078.58450174162 1078.5834099358601 75.372 2 -0.058212925459669405 0.017975304570097505 0.18491112833191098 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2', 'nc|ENSG00000109854|Q9BUP3-2|HTATIP2'] 81285 16209 PLAAIAPS True PC9_epitope_Rep2 738.4275900940601 738.4270449679301 67.595 1 -0.058246327735903915 0.017975304570097505 0.18499449160328657 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 60675 16605 LHLYLSHSIF True PC9_epitope_Rep4 1228.6604435632 1228.65880490379 71.846 3 -0.05826385243620115 0.017975304570097505 0.18503823762141022 ['ENST00000592643.5_1_17:73774540-73774585:-|nuORF'] 112976 20698 TLLRLLYEA True PC9_epitope_Rep2 1090.6386454894598 1090.63754993586 85.051 2 -0.058272250227161156 0.017975304570097505 0.18505920279216612 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 53546 22610 KRNYRFFYMFI True PC9_epitope_Rep5 1583.8071248802296 1583.8054649037902 91.966 3 -0.05829653867174761 0.017975304570097505 0.18511984713606733 ['ENST00000523468.5_1_6:157963626-158049550:+|nuORF', 'nc|ENSG00000175048|Q8IZN3-2|ZDHHC14', 'ENSG00000175048|ENST00000359775|ZDHHC14'] 103030 19122 SPFQFTVGP True PC9_epitope_Rep6 978.4810822188999 978.47998993586 86.202 2 -0.05830139262102093 0.017975304570097505 0.18513196809190274 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 70370 6388 LVSWGAGC[Carbamidomethyl]QKS True H1975_Epitope_Rep3 1191.57064286206 1191.56954993586 29.548 2 -0.05831799907258919 0.017975304570097505 0.18517344019468313 ['nc|ENSG00000283706|Q9UI38|PRSS50'] 20306 12987 ENTLQLVRNI True H1975_Epitope_Rep3 1198.6669854956199 1198.6658899358602 55.188 2 -0.058357683597493604 0.0179948056231191 0.1852725687873661 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 109251 7684 TASKREFLRRT True H1975_Epitope_Rep3 1363.7684308723897 1363.76677490379 34.539 3 -0.05836634278047264 0.0179948056231191 0.1852942029094541 ['nc|ENSG00000159625|Q8IY82-2|DRC7', 'ENSG00000159625|ENST00000360716|DRC7'] 116853 19119 TVESVIESAL True PC9_epitope_Rep3 1046.54955570154 1046.5484499358602 78.764 2 -0.05842003004171255 0.0179948056231191 0.18542836897320109 ['ENSG00000132478|ENST00000589666|UNK'] 24831 14745 FAVIGRSSL True PC9_epitope_Rep2 948.53926580136 948.53816993586 61.984 2 -0.05842868950697518 0.018013932973329486 0.1854500146681715 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'ENST00000502426.5_1_17:48755439-48768558:+|nuORF'] 127305 15217 VMEKPSPLLVG True PC9_epitope_Rep5 1168.6525813014398 1168.6514899358601 63.542 2 -0.058432998041657455 0.018013932973329486 0.18546078509031266 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENST00000507701.1_1_4:76587113-76598433:-|nuORF', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000518726.5_1_5:151166169-151166277:+|nuORF'] 65028 11859 LQITTREDI True PC9_epitope_Rep2 1087.58733819259 1087.58624993586 50.942 2 -0.058446698834826685 0.018013932973329486 0.18549503664791556 ['ENSG00000164830|ENST00000517566|OXR1', 'nc|ENSG00000164830|Q8N573|OXR1', 'nc|ENSG00000164830|Q8N573-4|OXR1'] 17289 14607 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 64.115 2 -0.05846088969898766 0.018013932973329486 0.18553051735053028 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 73442 16645 MVADKFTEL True PC9_epitope_Rep5 1052.52123277872 1052.52012993586 69.03 2 -0.058476403117567494 0.01803305716994353 0.18556930940590674 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 142116 22296 YVPPELITL True PC9_epitope_Rep1 1043.59029831471 1043.58920993586 90.573 2 -0.05851050692081774 0.01803305716994353 0.1856546046437746 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 24214 21237 EYSIVIQQL True PC9_epitope_Rep3 1091.58627556343 1091.5851699358602 86.979 2 -0.058545879531667594 0.01803305716994353 0.1857430979518706 ['nc|ENSG00000244038|P39656-2|DDOST', 'nc|ENSG00000244038|P39656-3|DDOST', 'ENSG00000244038|ENST00000602624|DDOST', 'nc|ENSG00000244038|P39656|DDOST'] 134351 12489 VYPEKLATKF True PC9_epitope_Rep1 1194.6648602372995 1194.66376993586 52.907 2 -0.05858614687101173 0.01803305716994353 0.1858438672648318 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 49255 6537 KEQEPMPTV True H1975_Epitope_Rep3 1057.5113963710098 1057.51028993586 30.113 2 -0.0586484677255632 0.01804957451630849 0.1859998899530013 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2'] 120827 16414 VELNIVAGYG True H1975_Epitope_Rep2 1033.5444107514497 1033.5433099358602 68.357 2 -0.058658968052388884 0.01804957451630849 0.18602618561835263 ['nc|ENSG00000110697|O00562-2|PITPNM1', 'ENSG00000110697|ENST00000356404|PITPNM1', 'ENST00000527370.5_1_11:67259506-67263940:-|nuORF'] 73806 18142 NAIGVLQQC True PC9_epitope_Rep5 944.4749512926401 944.47384993586 74.793 2 -0.05868448988129819 0.01804957451630849 0.18609010843975876 ['ENSG00000152944|ENST00000282892|MED21'] 139085 7773 YLDEGRLRY True H1975_Epitope_Rep2 1183.5985715826298 1183.59691490379 34.846 3 -0.05869981602750353 0.01804957451630849 0.1861285011081856 ['ENSG00000087095|ENST00000407008|NLK'] 61901 9211 LLDEDNNIK True PC9_epitope_Rep3 1072.540053647 1072.53894993586 40.365 2 -0.05870118907975951 0.01804957451630849 0.18613194089477358 ['ENSG00000142149|ENST00000270112|HUNK'] 103104 14658 SPHGIIVIA True PC9_epitope_Rep5 905.5334521449299 905.53234993586 61.386 2 -0.05870517954886881 0.01804957451630849 0.18614193807983098 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 62033 9881 LLDRLYEHY True H1975_Epitope_Rep2 1220.61897267404 1220.61733490379 42.995 3 -0.05871275249667984 0.01804957451630849 0.18616091120575218 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ-CACNG4|1|fusion'] 30142 23751 FYPALADLF True PC9_epitope_Rep3 1055.5327834385898 1055.5316899358602 96.643 2 -0.058727980447734536 0.01804957451630849 0.1861990665274211 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 100167 11721 SITSELHAV True PC9_epitope_Rep6 955.4974605590301 955.49636993586 56.231 2 -0.05874026838027644 0.01804957451630849 0.18622985870438807 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 1696 8154 AEGLEPPAA True H1975_Epitope_Rep2 853.4181476091699 853.4175949679301 36.314 1 -0.05876120268291068 0.01804957451630849 0.1862823247014628 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 27254 20265 FLPPDAFIHV True PC9_epitope_Rep4 1154.61243074162 1154.61132993586 86.092 2 -0.05877691865373977 0.01804957451630849 0.18632171819162546 ['ENSG00000130383|ENST00000588525|FUT5', 'ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 87131 17129 QPAGVSLVSV True PC9_epitope_Rep4 955.53384606775 955.53274993586 73.891 2 -0.058803126791388056 0.018087056836207073 0.18638742227856553 ['ENSG00000196663|ENST00000359520|TECPR2'] 47241 14421 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.45752993586 60.294 2 -0.058831214825359995 0.018087056836207073 0.18645785460777053 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 107510 5285 SVNRPALR True H1975_Epitope_Rep3 911.5300980999899 911.52900993586 25.412 2 -0.0589600714481283 0.018087056836207073 0.18678117297516666 ['nc|ENSG00000099834|Q9HBB8-2|CDHR5', 'nc|ENSG00000099834|Q9HBB8-4|CDHR5', 'ENSG00000099834|ENST00000397542|CDHR5'] 114224 10439 TPLYTDNTA True PC9_epitope_Rep5 994.46074069714 994.4596499358599 45.14 2 -0.05896717642345246 0.018087056836207073 0.18679901000112242 ['ENSG00000174231|ENST00000304992|PRPF8'] 31802 9948 GEIGLGTPP True H1975_Epitope_Rep1 839.43888305375 839.43833496793 43.202 1 -0.05898005425805131 0.018087056836207073 0.18683134236183685 ['ENSG00000131400|ENST00000253719|NAPSA'] 24581 21191 FAIDEVLEKV True PC9_epitope_Rep2 1161.62814037541 1161.6270499358602 86.966 2 -0.05899522331192875 0.018087056836207073 0.1868694315543282 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF', 'DDX60L|p.V1147I|1|0.13|ENSG00000181381|chr4:168400878-168400878|C/T|missense_variant'] 108241 22982 SYIDVLPEF True PC9_epitope_Rep3 1081.53317736141 1081.53267496793 93.667 1 -0.05901355569099634 0.018087056836207073 0.18691546995828806 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 97241 5707 SEAATPPVA True H1975_Epitope_Rep2 841.4181476091699 841.4175949679301 26.948 1 -0.05902027365986171 0.018087056836207073 0.18693234259272584 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 108976 16796 TAFPEASFL True H1975_Epitope_Rep2 981.4807478657299 981.4801949679301 69.854 1 -0.05902210074661717 0.018087056836207073 0.1869369316017312 ['ENSG00000171206|ENST00000643721|TRIM8'] 98274 8922 SEVGKLLSA True H1975_Epitope_Rep2 902.50729696674 902.50618993586 39.28 2 -0.0590397225624685 0.018087056836207073 0.186981194938481 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF', 'WDR54|p.A261T|1|0.05|ENSG00000005448|chr2:74425220-74425220|G/A|missense_variant'] 56429 18518 LDEHGIAAAL True PC9_epitope_Rep3 1008.5240096600398 1008.52290993586 76.448 2 -0.05905375076135614 0.018107284113381673 0.1870164361087016 ['SBF1|p.R777Vfs*41|1|0.13|ENSG00000100241|chr22:50462257-50462272|GCTCCCGAAGTAGGCG/-|frameshift_variant', 'nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 17379 9499 EHDPHVLLA True PC9_epitope_Rep3 1029.5243440132099 1029.5232499358601 41.487 2 -0.0590845699698425 0.01811780692182578 0.18709387295940616 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 37079 21459 GVPQALFGV True PC9_epitope_Rep3 886.4912529797799 886.49014993586 87.833 2 -0.05909390001619961 0.01811780692182578 0.18711731954624813 ['ENSG00000010292|ENST00000315579|NCAPD2'] 96894 11698 SATSLLHTV True PC9_epitope_Rep4 927.5025459394701 927.50144993586 52.758 2 -0.05911586468477308 0.01811780692182578 0.18717252407955273 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 30146 21704 FYPALADLF True PC9_epitope_Rep6 1055.5327834385898 1055.5316899358602 96.371 2 -0.0591167212922335 0.01811780692182578 0.18717467721575026 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 43222 17886 IFKPPDPDNTF True PC9_epitope_Rep1 1289.62920300457 1289.62810993586 73.591 2 -0.059127697938847416 0.01811780692182578 0.18720226900367126 ['ENSG00000165943|ENST00000298894|MOAP1'] 124728 12781 VHAPPMQL True PC9_epitope_Rep3 891.46365833295 891.46256993586 54.184 2 -0.05915256585675567 0.01811780692182578 0.18726478795817272 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 26290 8992 FHGPGEAL True PC9_epitope_Rep2 826.3973525949399 826.3962499358599 39.94 2 -0.05915309748969677 0.01811780692182578 0.18726612464040696 ['ENSG00000277150|ENST00000622749|F8A3'] 137825 6070 YEREQVIAA True NCI_RA007_Epitope_Rep4 1077.5454733806098 1077.54436993586 29.965 2 -0.05917357913751813 0.01811780692182578 0.1873176258693327 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 23784 17331 EYGYIRTVL True PC9_epitope_Rep4 1112.5866099165999 1112.58550993586 74.67 2 -0.059181094206906336 0.01811780692182578 0.18733652466762607 ['PKP2|p.R46Afs*66|1|0.45|ENSG00000057294|chr12:32896596-32896596|G/-|frameshift_variant', 'PKP2|p.G47Rfs*39|1|0.45|ENSG00000057294|chr12:32896593-32896594|-/T|frameshift_variant', 'PKP2|p.V104Cfs*3|1|0.31|ENSG00000057294|chr12:32878947-32878948|-/G|frameshift_variant', 'nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 23779 22908 EYGSIIAFF True PC9_epitope_Rep4 1045.51204799401 1045.5114749679299 96.335 1 -0.05919113151292223 0.01811780692182578 0.18736176812059283 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 45122 19339 IPLTLLPAA True PC9_epitope_Rep6 907.5742543277498 907.57314993586 87.036 2 -0.059212807429648476 0.01811780692182578 0.18741628914245517 ['ENSG00000116903|ENST00000366645|EXOC8'] 72903 19015 MPTLPPPSV True PC9_epitope_Rep5 937.49428975489 937.49318993586 78.167 2 -0.05923298191856885 0.01811780692182578 0.18746704211819407 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 25261 14466 FDLGGGTFD True H1975_Epitope_Rep3 927.39741216459 927.39686496793 61.002 1 -0.05925971797157772 0.01811780692182578 0.1875343146010618 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000442006.2_1_1:39174637-39175513:+|nuORF'] 48848 4541 KEADYVAQA True NCI_RA007_Epitope_Rep4 993.4767251144498 993.47562993586 23.869 2 -0.05927860684295339 0.01811780692182578 0.1875818508729704 ['ENSG00000013583|ENST00000014930|HEBP1'] 26292 8553 FHGPGEAL True PC9_epitope_Rep4 826.3973525949399 826.3962499358599 40.378 2 -0.05927927274468145 0.01811780692182578 0.1875835268307768 ['ENSG00000277150|ENST00000622749|F8A3'] 15188 7781 EAAVVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44341496793 37.73 1 -0.05928413222470281 0.01811780692182578 0.18759575755848903 ['ENSG00000154174|ENST00000284320|TOMM70'] 43649 12958 IHDFQPHVI True PC9_epitope_Rep1 1104.5716285588 1104.5705299358601 54.715 2 -0.05930341468628287 0.01811780692182578 0.1876442938654938 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 64891 11436 LQEDPPAGV True PC9_epitope_Rep3 924.4552613938798 924.45416993586 48.987 2 -0.05932238696169921 0.01811780692182578 0.18769205667116698 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 114048 16023 TPEDPFSSA True PC9_epitope_Rep5 949.4028914678499 949.40178993586 66.621 2 -0.059337644053202805 0.01811780692182578 0.1877304717157081 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'ENST00000557486.1_1_14:73748983-73753845:-|nuORF', 'ENST00000553997.5_1_14:73748216-73753941:-|nuORF'] 10026 8029 AYRQGHFTY True PC9_epitope_Rep3 1141.53049202281 1141.52884490379 35.859 3 -0.05938492759980751 0.01811780692182578 0.1878495541569634 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 85927 11146 QHGPPNIVV True PC9_epitope_Rep1 959.51886470995 959.51776993586 47.757 2 -0.05943325173413476 0.01811780692182578 0.18797130358663516 ['ENSG00000124209|ENST00000244040|RAB22A'] 38572 4495 HEVIVSAA True NCI_RA007_Epitope_Rep5 824.43921740692 824.43812993586 23.943 2 -0.05943626293100237 0.01811780692182578 0.18797889164473958 ['ENSG00000179051|ENST00000375436|RCC2'] 126196 14618 VLGAFSDG True PC9_epitope_Rep5 764.37046914076 764.36992496793 61.229 1 -0.059444155019463464 0.01811780692182578 0.18799878015555985 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 73154 12584 MRSPISAQL True PC9_epitope_Rep4 1001.5328005219299 1001.53170993586 56.234 2 -0.05946067458213615 0.01811780692182578 0.18804041443063493 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF'] 134033 8388 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 41.932 3 -0.059473441541695926 0.01811780692182578 0.1880725947604421 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 76595 19849 NQMDGFDTL True PC9_epitope_Rep2 1039.4280606698699 1039.4269699358601 81.741 2 -0.05947822148027979 0.01811780692182578 0.18808464388808077 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 118926 14047 VADPVEAVL True NCI_RA007_Epitope_Rep4 911.4963979298699 911.49530993586 61.314 2 -0.05948413772107119 0.01811780692182578 0.1880995580064791 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 69841 14771 LVHDLFQKV True PC9_epitope_Rep1 1097.62332977849 1097.62222993586 61.636 2 -0.059493061720172796 0.01813540830399967 0.18812205564155618 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 63039 18846 LLQAQNLLT True PC9_epitope_Rep5 1012.59169529704 1012.59058993586 77.508 2 -0.059503806331781046 0.01813540830399967 0.18814914520484505 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'ENST00000560232.6_1_1:167301714-167356435:+|nuORF'] 38063 12016 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.4495649679301 51.081 1 -0.059532011683081955 0.01813540830399967 0.18822026819047163 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 71933 9835 MEQQTLSIA True H1975_Epitope_Rep2 1019.4957463068699 1019.4951749679301 42.816 1 -0.0595399325019961 0.01813540830399967 0.18824024429720057 ['ENSG00000104738|ENST00000649973|MCM4'] 118407 14420 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47107496793 60.736 1 -0.059567054508325175 0.01813540830399967 0.18830865483341938 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 127413 6993 VNESVYNAT True H1975_Epitope_Rep3 995.4559896698701 995.45544496793 31.861 1 -0.0595969984885255 0.01813540830399967 0.18838420041458367 ['PCDH7|p.S844Y|1|0.3|ENSG00000169851|chr4:30723953-30723953|C/A|missense_variant'] 42983 7725 IESRTLAIA True NCI_RA007_Epitope_Rep4 972.5603951687599 972.5598449679301 36.386 1 -0.05961548578478681 0.01813540830399967 0.188430850923786 ['ENSG00000147872|ENST00000276914|PLIN2'] 63028 20533 LLPVRLPLA True PC9_epitope_Rep5 990.6589870112199 990.65788993586 84.022 2 -0.05965199456483335 0.01813540830399967 0.18852299661582275 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 1003 8108 AEAAVVAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 36.132 1 -0.05967964538464018 0.018154124814753828 0.18859280316948365 ['ENSG00000211450|ENST00000534355|SELENOH'] 128589 12246 VPTPAPISA True PC9_epitope_Rep4 851.47526856247 851.47416993586 54.921 2 -0.059703675192149225 0.018154124814753828 0.18865348063452408 ['ZXDB|p.S747Cfs*17|1|0.09|ENSG00000198455|chrX:57594287-57594288|AG/-|frameshift_variant', 'ENSG00000198455|ENST00000374888|ZXDB', 'ZXDB|p.F334Lfs*22|1|0.19|ENSG00000198455|chrX:57593045-57593045|C/-|frameshift_variant', 'ENSG00000198205|ENST00000358697|ZXDA'] 76224 15380 NNWLRVVPR True PC9_epitope_Rep1 1152.6516102149997 1152.64996490379 63.977 3 -0.05972221650723498 0.018154124814753828 0.1887003070508017 ['nc|ENSG00000095713|Q9NQ79-3|CRTAC1', 'nc|ENSG00000095713|Q9NQ79-2|CRTAC1', 'ENSG00000095713|ENST00000370597|CRTAC1'] 90543 8607 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64349490379 39.783 3 -0.05974495920595544 0.018154124814753828 0.18875775352810192 ['ENSG00000127540|ENST00000591899|UQCR11'] 2802 5739 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 27.144 2 -0.05977932206428401 0.018154124814753828 0.18884457135037666 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 104649 13068 SQTDVKTFL True PC9_epitope_Rep4 1037.53932537101 1037.53822993586 58.159 2 -0.05985341064763832 0.018170219771174584 0.18903183664440668 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF'] 6575 6765 APVFTQRP True NCI_RA007_Epitope_Rep4 914.4974009893799 914.49630993586 32.64 2 -0.05987149756130749 0.018170219771174584 0.18907756955085764 ['nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 40079 11090 HPVEDGIMDA True PC9_epitope_Rep5 1082.47025983502 1082.46916993586 47.646 2 -0.05991742153062388 0.018170219771174584 0.1891937180626625 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000469811.1_1_14:77352823-77353039:-|nuORF'] 116978 19968 TVGPLIFL True H1975_Epitope_Rep3 858.5214904789 858.5209449679301 83.567 1 -0.05992734926731548 0.018170219771174584 0.18921883231966216 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'ENST00000310842.8_1_7:76239320-76240795:-|nuORF'] 31755 6884 GEHIATEITA True H1975_Epitope_Rep3 1040.51383889916 1040.51274993586 31.438 2 -0.05993173466766157 0.018170219771174584 0.18922992672142683 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 89033 21811 QVLEELTEL True PC9_epitope_Rep1 1072.5652057656798 1072.5641099358602 88.707 2 -0.05993605080039988 0.018170219771174584 0.18924084626194032 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT2|p.R386W|1|0.28|ENSG00000131459|chr5:180316458-180316458|G/A|missense_variant', 'ENSG00000131459|ENST00000253778|GFPT2'] 43916 12891 IIAPMMLVNL True PC9_epitope_Rep4 1113.62900940589 1113.62790993586 57.465 2 -0.05999974075231327 0.018170219771174584 0.18940202106084497 ['OR5D16|p.L100Ffs*14|1|0.43|ENSG00000205029|chr11:55839047-55839048|-/T|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16'] 8372 15796 ATLNIIHSV True PC9_epitope_Rep1 966.5498304850599 966.54872993586 65.572 2 -0.06001095414339498 0.018170219771174584 0.18943040623788857 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 69483 18840 LVAPPLPAA True PC9_epitope_Rep2 847.51673945163 847.51564993586 77.837 2 -0.06004141588473456 0.018170219771174584 0.1895075286826649 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 94663 9964 RRWSLVDDLY True H1975_Epitope_Rep2 1321.6778845324898 1321.6767899358601 43.319 2 -0.06004632800245573 0.018170219771174584 0.1895199668226213 ['STARD13|p.R155L|1|0.21|ENSG00000133121|chr13:33130213-33130213|C/A|missense_variant'] 6458 13176 APSGNFVAC True PC9_epitope_Rep1 864.37998827864 864.37943496793 55.545 1 -0.06005040615322752 0.018170219771174584 0.18953029361279244 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 108643 10801 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 46.536 3 -0.06005290912773172 0.018170219771174584 0.18953663186877107 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 1254 15097 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 63.224 1 -0.06005598151482886 0.018189300411522634 0.18954441221336102 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 131214 17391 VTERNLLEV True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 72.156 2 -0.060067304540338026 0.018189300411522634 0.18957308765025283 ['VPS45|p.S343T|1|0.11|ENSG00000136631|chr1:150082807-150082807|G/C|missense_variant'] 40440 5725 HRAPVVAIA True PC9_epitope_Rep4 932.5555845718399 932.55448993586 28.846 2 -0.06008430474985699 0.018189300411522634 0.1896161453019367 ['ENSG00000131899|ENST00000316843|LLGL1'] 111899 15573 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.5336349679301 65.051 1 -0.060094418646533934 0.018189300411522634 0.18964176423321635 ['ENSG00000213719|ENST00000375784|CLIC1'] 133439 10034 VVWQRRHAR True PC9_epitope_Rep3 1206.68464167878 1206.6829949037901 43.552 3 -0.060137273792033534 0.018228202279553966 0.18975034081098985 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 139996 19278 YQDPSVLYI True PC9_epitope_Rep6 1096.54407639828 1096.5429699358601 86.799 2 -0.06014314807557244 0.018228202279553966 0.18976522658689118 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 89118 13047 QVQELFHEA True PC9_epitope_Rep5 1099.52982331647 1099.5287299358602 55.189 2 -0.060146679192370614 0.018228202279553966 0.18977417497367488 ['ENSG00000221955|ENST00000469902|SLC12A8', 'ENST00000481760.2_1_3:124925611-124930193:-|nuORF'] 89128 4532 QVQRPFMNK True NCI_RA007_Epitope_Rep4 1146.59679776082 1146.59515490379 23.828 3 -0.060151695580207235 0.018228202279553966 0.189786887691153 ['ENST00000281172.9_1_12:15822752-15835827:-|nuORF'] 26690 21619 FIVDPVSNL True PC9_epitope_Rep1 1002.53859709502 1002.53750993586 87.983 2 -0.060153597799222434 0.018228202279553966 0.18979170849704496 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 71777 4409 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 22.081 2 -0.060165034421116245 0.018228202279553966 0.18982069392449466 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 35423 16096 GSEGFVIIN True PC9_epitope_Rep6 934.47599683846 934.47544496793 74.249 1 -0.06023182268493728 0.01824464693419997 0.18999001689699033 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|269|2|anti-sense'] 80331 8506 PGGGGSLPAG True PC9_epitope_Rep1 768.37661715036 768.37552993586 37.554 2 -0.06023712749957622 0.01824464693419997 0.190003469588617 ['ENST00000331457.8_1_22:31795578-31795629:+|nuORF'] 24023 18355 EYNAFFYSL True NCI_RA007_Epitope_Rep3 1152.51277627 1152.51166993586 80.379 2 -0.06026628781366294 0.01824464693419997 0.19007742842464265 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3', 'ENST00000491292.5_1_2:128018779-128018920:-|nuORF'] 114841 19407 TQNDIISTL True PC9_epitope_Rep2 1003.51858992643 1003.51807496793 80.027 1 -0.06027277067609428 0.01824464693419997 0.1900938731101736 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 22318 7317 ETDLRNHFY True H1975_Epitope_Rep2 1193.5465360097699 1193.54488490379 33.085 3 -0.06027888827907227 0.01824464693419997 0.1901093920332472 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22'] 24631 16792 FAITAIKGV True PC9_epitope_Rep4 918.5538532363399 918.55274993586 72.561 2 -0.06028737667321206 0.01824464693419997 0.1901309263341386 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18', 'ENST00000495909.2_1_5:90650295-90650631:+|nuORF'] 101964 22969 SLQFIPILI True PC9_epitope_Rep2 1042.6426682407398 1042.6415699358602 93.843 2 -0.06029680158918099 0.01824464693419997 0.19015483819204784 ['ENSG00000260286|ENST00000565469|ARMH2'] 88536 9372 QTAQIFFTK True NCI_RA007_Epitope_Rep3 1082.5760452328998 1082.57494993586 43.956 2 -0.06034068765494368 0.01824464693419997 0.19026620442069878 ['ENSG00000167778|ENST00000301463|SPRYD3'] 35703 22289 GTFDIFYTA True PC9_epitope_Rep2 1033.4756624852898 1033.47456993586 91.213 2 -0.06034462148532217 0.01824464693419997 0.1902761888701317 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 118776 17704 VAAAPTLVS True PC9_epitope_Rep1 827.47526856247 827.47416993586 72.893 2 -0.06035070190927509 0.01824464693419997 0.1902916221930819 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 111262 16363 THLGPLASL True PC9_epitope_Rep2 907.51271670035 907.51160993586 68.185 2 -0.060356190491727024 0.01824464693419997 0.19030555393814533 ['ENSG00000127399|ENST00000359623|LRRC61'] 71725 10240 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 44.394 2 -0.06036956849000064 0.018259206711492195 0.1903395140142593 ['ENSG00000026025|ENST00000544301|VIM'] 34681 9177 GQDGQLKGF True PC9_epitope_Rep3 948.4664947839199 948.46538993586 40.239 2 -0.06037282283966758 0.018259206711492195 0.19034777572740275 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 19677 9996 ELRGPPVLP True H1975_Epitope_Rep2 976.5705659296399 976.56946993586 43.44 2 -0.06037299859798159 0.018259206711492195 0.19034822192541093 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1'] 96606 20488 SAGPEGLLGV True PC9_epitope_Rep5 898.4759968384599 898.47488993586 83.847 2 -0.06038038774112865 0.018259206711492195 0.19036698131640206 ['ENSG00000130935|ENST00000253247|NOL11', 'NOL11|p.L15M|1|0.25|ENSG00000130935|chr17:67717990-67717990|C/A|missense_variant', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 103018 21063 SPFPLEAV True PC9_epitope_Rep1 858.44871946146 858.44762993586 85.85 2 -0.06038368227490902 0.018259206711492195 0.19037534575592793 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 80353 10629 PGGLGSSSLY True H1975_Epitope_Rep1 936.4552613938799 936.45471496793 45.841 1 -0.06038547074690798 0.018259206711492195 0.19037988656975743 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 98903 19657 SGYPGLLNGV True PC9_epitope_Rep4 975.5025459394699 975.50199496793 83.729 1 -0.060387447151311884 0.018259206711492195 0.19038490460591617 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 71407 21307 LYSSEQLLI True PC9_epitope_Rep1 1064.57537652656 1064.5748749679299 86.786 1 -0.06042996229191052 0.018259206711492195 0.19049286823463937 ['ENSG00000168209|ENST00000307365|DDIT4'] 40117 16327 HPYLFPVA True PC9_epitope_Rep6 942.4963383602199 942.49524993586 75.171 2 -0.06043844141221405 0.018259206711492195 0.19051440455966387 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 140312 10305 YRDETLSGSEL True PC9_epitope_Rep6 1268.5884603913998 1268.5873699358601 50.33 2 -0.06048846686936766 0.018259206711492195 0.19064149461812513 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 136306 6269 WSQHYHQGYY True H1975_Epitope_Rep2 1367.56833408351 1367.56669490379 29.058 3 -0.06052150385271207 0.018259206711492195 0.19072545268036795 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 86288 17978 QISDTSVVL True PC9_epitope_Rep1 960.51277627 960.51222496793 73.945 1 -0.06053852473753126 0.018259206711492195 0.19076871695226646 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 86849 19662 QLQLSLAI True PC9_epitope_Rep6 884.5331177917599 884.53202993586 88.288 2 -0.060562246550586354 0.018259206711492195 0.1908290235053077 ['ENSG00000089775|ENST00000608382|ZBTB25'] 58590 8210 LEQQRRYHEEK True NCI_RA007_Epitope_Rep1 1514.7589883875 1514.75788993586 35.934 2 -0.06059658222462585 0.018259206711492195 0.19091633290665574 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF'] 93382 13896 RQALMPVIL True NCI_RA007_Epitope_Rep4 1039.6212216035099 1039.6201299358602 60.724 2 -0.06060607915089784 0.018259206711492195 0.19094048601743877 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2'] 78292 15294 NYIMKIHNF True PC9_epitope_Rep3 1178.5906497512199 1178.58901490379 63.981 3 -0.06061252633147216 0.018259206711492195 0.19095688386942342 ['ENSG00000101126|ENST00000621696|ADNP'] 86315 8273 QITQINHGL True PC9_epitope_Rep6 1022.5508931142199 1022.5497899358601 41.429 2 -0.06062174579856948 0.018271503442606103 0.19098033423365313 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24697 20371 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.54184993586 85.176 2 -0.060640477290691316 0.018271503442606103 0.19102798431873755 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 6030 16629 APLAIPSAA True PC9_epitope_Rep3 809.46470387877 809.46360993586 69.099 2 -0.06066349180496506 0.018271503442606103 0.1910865393337116 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 6006 7250 APIRPDIVN True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 34.522 2 -0.06067409337673402 0.018271503442606103 0.19111351608706362 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 92031 4942 RKRSSSRDNR True H1975_Epitope_Rep3 1260.6759274698798 1260.67429490379 24.137 3 -0.060676744442221785 0.018271503442606103 0.19112026233662557 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 76297 13702 NPNQYNYIA True PC9_epitope_Rep5 1095.49852318819 1095.4979749679298 57.732 1 -0.0606863427969492 0.018271503442606103 0.19114468874196153 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 34288 12170 GPAAAFTAA True PC9_epitope_Rep5 775.38645355807 775.3859049679301 51.801 1 -0.06070455963343867 0.018271503442606103 0.19119105296500116 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 68947 13931 LTPEEEEILNK True PC9_epitope_Rep1 1313.6714617393698 1313.6703699358602 58.421 2 -0.06070737785447938 0.018271503442606103 0.1911982262950939 ['ENSG00000142937|ENST00000396651|RPS8'] 5811 14573 APELLFFAK True H1975_Epitope_Rep3 1034.5800679841798 1034.5789699358602 61.422 2 -0.06072988792449631 0.018271503442606103 0.19125552774784407 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 106625 11232 STRPASAAAL True PC9_epitope_Rep5 943.5086939490699 943.50758993586 48.194 2 -0.06073166637899827 0.018271503442606103 0.1912600553973262 ['ENST00000215941.8_1_22:38227477-38227936:-|nuORF'] 102394 21029 SLTGVPILVV True PC9_epitope_Rep2 996.6219327961599 996.62082993586 86.341 2 -0.06074947124744587 0.018271503442606103 0.19130538710325967 ['ENSG00000250510|ENST00000311268|GPR162'] 43944 11703 IIDNNDTQL True PC9_epitope_Rep4 1044.50875351872 1044.5076499358602 52.777 2 -0.060759043732017015 0.018271503442606103 0.19132976153237014 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 64069 6202 LPASNLAGKEA True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 32.314 2 -0.060814594337716174 0.018271503442606103 0.19147124611343097 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 67629 20537 LSVPGLVSV True PC9_epitope_Rep4 869.52221875489 869.52167496793 87.146 1 -0.06082434908776036 0.018271503442606103 0.19149609730768866 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 117197 20306 TVLGYISAV True PC9_epitope_Rep4 921.5171333744499 921.51602993586 86.25 2 -0.06085810194022922 0.018271503442606103 0.19158210066231107 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 64070 6289 LPASNLAGKEA True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 32.705 2 -0.06086139175532073 0.018271503442606103 0.19159048442952145 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 131161 13460 VTEIMSMGY True H1975_Epitope_Rep3 1029.45110461357 1029.4500099358602 57.047 2 -0.060862340690693136 0.018271503442606103 0.19159290273714213 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 6246 5215 APQPQRTL True PC9_epitope_Rep3 909.50321464581 909.50210993586 25.141 2 -0.06088561091112328 0.018271503442606103 0.19165221117203454 ['ENST00000583776.1_1_18:2906615-2908961:+|nuORF'] 132741 17167 VVIGAVVAA True PC9_epitope_Rep2 797.50108938749 797.5005449679301 71.292 1 -0.06102207499883084 0.018271503442606103 0.19200023177950507 ['ENSG00000234745|ENST00000412585|HLA-B'] 118927 14161 VADPVEAVL True NCI_RA007_Epitope_Rep5 911.4963979298699 911.49530993586 61.161 2 -0.06103138777845803 0.018271503442606103 0.19202399540310391 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 34286 11015 GPAAAFTAA True PC9_epitope_Rep4 775.38645355807 775.3859049679301 50.146 1 -0.061037966180494146 0.018271503442606103 0.19204078269467714 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 117969 16107 TYAPVKSFL True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 69.893 2 -0.061068055849892625 0.018271503442606103 0.1921175788818859 ['ENSG00000157350|ENST00000342907|ST3GAL2'] 119313 21793 VAMLPGLAL True PC9_epitope_Rep4 883.5201105799099 883.51900993586 92.021 2 -0.06112280130294406 0.01830508474576271 0.19225734880653733 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 97733 4403 SEIKMEQA True NCI_RA007_Epitope_Rep3 934.4429824580199 934.44188993586 24.098 2 -0.06114839308545369 0.01830508474576271 0.19232270729103176 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 136219 20734 WRSLPLLPV True PC9_epitope_Rep5 1079.64915060351 1079.6480499358602 84.812 2 -0.06115003068846326 0.01830508474576271 0.19232688998474148 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 127854 20908 VPFPTPLEA True PC9_epitope_Rep5 969.5171333744498 969.51602993586 85.477 2 -0.061175832131016385 0.01830508474576271 0.1923927979291495 ['ENSG00000196976|ENST00000357360|LAGE3'] 35051 8965 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 39.84 2 -0.06117904636587513 0.01830508474576271 0.19240100938918875 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 119315 20628 VAMLPGLAL True PC9_epitope_Rep6 883.5201105799099 883.51900993586 92.078 2 -0.06118599842835796 0.01830508474576271 0.19241877064253182 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 13494 11998 DNKTSQPITL True PC9_epitope_Rep2 1115.58225281215 1115.5811499358601 51.467 2 -0.061190253242620125 0.01830508474576271 0.19242964139156526 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'SDK2|p.P1051Lfs*33|1|0.18|ENSG00000069188|chr17:73398361-73398371|GCGGGCATCGG/-|frameshift_variant', 'SDK2|p.S1083Vfs*66|1|0.28|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 25416 8279 FEDESPPAP True H1975_Epitope_Rep3 987.4185415319898 987.4179949679301 36.828 1 -0.061205032708925 0.01830508474576271 0.19246740467497103 ['ENSG00000105464|ENST00000263269|GRIN2D'] 138339 7979 YHEHQANLL True PC9_epitope_Rep1 1123.5410567065098 1123.53940490379 35.514 3 -0.06123119003997196 0.01830508474576271 0.19253425038174168 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 121254 8139 VETFSGVYK True NCI_RA007_Epitope_Rep2 1028.5178616504397 1028.51676993586 36.293 2 -0.06125136043308284 0.01830508474576271 0.19258580559945027 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 64818 10675 LQDAGLLAD True H1975_Epitope_Rep2 914.4709114580199 914.46980993586 46.085 2 -0.06125644741317406 0.01830508474576271 0.19259880911883553 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF', 'ENST00000320442.8_1_12:58014065-58016599:+|nuORF'] 77888 21344 NVIDNLIVA True PC9_epitope_Rep2 969.5494961318899 969.54838993586 87.566 2 -0.06127995294146541 0.01830508474576271 0.1926589014585892 ['ENSG00000143621|ENST00000361891|ILF2'] 131125 15616 VTEFQETL True PC9_epitope_Rep2 965.4705771048499 965.46948993586 65.344 2 -0.06128801399963323 0.01830508474576271 0.19267951223657726 ['ARMC7|p.Q28L|1|0.17|ENSG00000125449|chr17:75110371-75110371|A/T|missense_variant'] 137352 7951 YDNEFGYSNR True NCI_RA007_Epitope_Rep1 1263.5156298043098 1263.5150749679299 34.92 1 -0.061317433735272556 0.01830508474576271 0.19275474452757127 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 54556 8368 KYISGPHEL True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 37.131 2 -0.061335195200209296 0.01830508474576271 0.19280017254974502 ['ENSG00000117724|ENST00000366955|CENPF'] 5440 19842 ALVESLITV True PC9_epitope_Rep6 943.55899818643 943.55790993586 88.983 2 -0.061373677366211334 0.01830508474576271 0.19289861883238477 ['ENSG00000196233|ENST00000421806|LCOR', 'LCOR|p.S314L|1|0.1|ENSG00000196233|chr10:96955561-96955561|C/T|missense_variant'] 103210 6399 SPKAALRYAA True PC9_epitope_Rep5 1046.58727862294 1046.5861899358601 29.59 2 -0.06138064626599211 0.01830508474576271 0.19291645003317637 ['ENSG00000181789|ENST00000314797|COPG1'] 134639 15697 VYSQFITQL True NCI_RA007_Epitope_Rep5 1097.5757108797297 1097.57460993586 67.096 2 -0.06141562034156518 0.01830508474576271 0.1930059521368502 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 7833 7895 ASVPKVETV True PC9_epitope_Rep4 928.52294703088 928.52184993586 37.797 2 -0.06143061460552244 0.01830508474576271 0.1930443313678843 ['ENSG00000100664|ENST00000216554|EIF5'] 142807 10546 YYSHLEGARF True PC9_epitope_Rep2 1241.5829215184897 1241.58127490379 45.885 3 -0.06147573552533847 0.01830508474576271 0.19315984951724474 ['ENSG00000142207|ENST00000382751|URB1'] 62757 20163 LLLPSEYSL True PC9_epitope_Rep4 1033.56956287013 1033.56846993586 85.695 2 -0.06152116855441192 0.01832412333860597 0.1932762075263232 ['ENST00000463792.5_1_2:220099420-220100035:+|nuORF', 'ENST00000477479.5_1_2:220099420-220101164:+|nuORF'] 48180 22028 IYPPLLGALSF True PC9_epitope_Rep6 1189.6746966450098 1189.67358993586 97.659 2 -0.06158424119840712 0.01832412333860597 0.1934378100028043 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 103316 9488 SPLSTPTSA True PC9_epitope_Rep5 859.42871229287 859.42760993586 41.451 2 -0.06159094795445538 0.01832412333860597 0.19345499845266773 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'CD320|p.A240Qfs*29|1|0.16|ENSG00000167775|chr19:8302594-8302594|C/-|frameshift_variant', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 127678 10304 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.4914349679301 44.581 1 -0.061619856042294974 0.01832412333860597 0.1935290959222333 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 123174 13436 VGLADAGL True H1975_Epitope_Rep1 714.39120458534 714.39065496793 56.795 1 -0.061626275690853445 0.01834278202284118 0.19354555307040533 ['nc|ENSG00000157077|O95405-3|ZFYVE9', 'ENST00000361625.5_1_1:52698878-52729552:+|nuORF', 'nc|ENSG00000157077|O95405-2|ZFYVE9', 'ENSG00000157077|ENST00000287727|ZFYVE9', 'ZFYVE9|p.C439F|1|0.16|ENSG00000157077|chr1:52238733-52238733|G/T|missense_variant'] 22433 13037 ETERFRELLLY True H1975_Epitope_Rep2 1467.7721788401498 1467.7710899358601 55.266 2 -0.06165160345902355 0.01834278202284118 0.1936104902674759 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 114644 6507 TQDTQPHYI True PC9_epitope_Rep6 1101.50908787189 1101.50798993586 33.698 2 -0.061656811023016386 0.01834278202284118 0.19362384337907373 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 128327 6251 VPPSFIRK True H1975_Epitope_Rep1 942.5650866263799 942.56398993586 29.113 2 -0.061666151329979005 0.01834278202284118 0.1936477949180573 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 36693 22382 GVISGLFEL True PC9_epitope_Rep4 933.5171333744499 933.51602993586 94.326 2 -0.06168570666851594 0.01834278202284118 0.19369794666823006 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 64572 13664 LPSIVNEVLK True H1975_Epitope_Rep3 1110.6648602373 1110.66376993586 57.85 2 -0.06169857724302259 0.018356535665886412 0.19373095876278124 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000544888.5_1_12:7077022-7079603:-|nuORF'] 45199 8104 IPRNTVVPT True PC9_epitope_Rep2 995.57637958607 995.57528993586 36.53 2 -0.06172359123483005 0.018356535665886412 0.19379512723282818 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000442006.2_1_1:39175842-39176013:+|nuORF', 'ENST00000509378.1_1_4:165110527-165110881:+|nuORF'] 110056 7516 TELESTVSA True H1975_Epitope_Rep2 935.4447562798299 935.4442049679301 33.861 1 -0.06172663025410662 0.018356535665886412 0.19380292408271735 ['ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 6660 17054 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 78.163 2 -0.06174603760741097 0.018356535665886412 0.19385271953248626 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 100922 11916 SLFEKGLKNV True PC9_epitope_Rep2 1133.6444591458899 1133.64280490379 51.159 3 -0.06175338049671033 0.018356535665886412 0.19387156188678775 ['FBXL5|p.L419Ffs*16|1|0.08|ENSG00000118564|chr4:15625845-15625846|-/A|frameshift_variant', 'nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 95776 14681 RYIDRIHIF True PC9_epitope_Rep4 1231.68257599011 1231.68094490379 64.405 3 -0.061809124417890576 0.018356535665886412 0.19401463940861766 ['ENSG00000174231|ENST00000304992|PRPF8'] 17869 6710 EHVPSSSSI True PC9_epitope_Rep5 941.44542498617 941.44432993586 30.782 2 -0.06181121128629891 0.018356535665886412 0.1940199969536195 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 82434 12351 PPPLPPPPP True PC9_epitope_Rep5 907.51673945163 907.51564993586 52.501 2 -0.06181225445484117 0.018356535665886412 0.19402267507641946 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'ENSG00000135723|ENST00000258201|FHOD1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000090470|ENST00000204549|PDCD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 13486 9071 DNIQTVKRLRT True PC9_epitope_Rep4 1342.7680965192199 1342.76644490379 42.475 3 -0.06183675139846036 0.018356535665886412 0.1940855721839794 87191 21727 QPILLELEA True PC9_epitope_Rep2 1024.580461907 1024.57936993586 89.049 2 -0.061837953101290075 0.018356535665886412 0.1940886579207875 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 56132 13977 LAVHPSGVAL True PC9_epitope_Rep1 962.5549158654999 962.55380993586 58.6 2 -0.0618409638147854 0.018356535665886412 0.1940963889671605 ['ENSG00000187608|ENST00000649529|ISG15'] 2863 11465 AEVEVSIPA True H1975_Epitope_Rep2 913.4756624852898 913.47511496793 49.155 1 -0.061877648189212965 0.018356535665886412 0.19419060317655137 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 38902 15987 HHFEQMLKL True PC9_epitope_Rep5 1181.6015487880898 1181.59990490379 66.485 3 -0.06189261507941917 0.018356535665886412 0.19422904936526364 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 125968 8649 VLDLEEELEK True NCI_RA007_Epitope_Rep1 1215.6234489177898 1215.62234993586 37.644 2 -0.061907508901470794 0.018356535665886412 0.19426731226101432 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113931616-113943025:+|nuORF'] 15428 9735 EALATLPSSP True H1975_Epitope_Rep1 984.51277627 984.51222496793 42.374 1 -0.06194027907475767 0.018356535665886412 0.19435151575774107 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 35091 7871 GQVPPGESV True PC9_epitope_Rep2 868.42904664604 868.4279499358599 35.643 2 -0.06194319245185887 0.018356535665886412 0.19435900275639284 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 56363 7696 LDDLVSTGK True PC9_epitope_Rep4 946.49712620586 946.49602993586 36.987 2 -0.06195091941582411 0.018356535665886412 0.19437886085794534 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 109479 10878 TDLLPNITRNG True H1975_Epitope_Rep1 1212.64625005104 1212.6451499358602 46.802 2 -0.06195191134591755 0.018356535665886412 0.1943814101786987 ['ENSG00000163933|ENST00000296292|RFT1', 'ENST00000471158.1_1_3:53137921-53154019:-|nuORF'] 57648 13552 LEEELKKKQVY True H1975_Epitope_Rep1 1405.78168089469 1405.78058993586 57.251 2 -0.061994893020852405 0.018376691374247994 0.19449189439627118 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 47141 9570 ITVNDLPVGR True H1975_Epitope_Rep1 1082.6084079903399 1082.60730993586 41.734 2 -0.06202698426595041 0.018416622182072025 0.19457440863578135 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 119564 19372 VATDFFTVL True NCI_RA007_Epitope_Rep5 1011.5276980581499 1011.52660993586 81.398 2 -0.06202940458593126 0.018416622182072025 0.1945806326812762 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 73804 15584 NAIGSASVVTV True PC9_epitope_Rep4 1016.55022440788 1016.54912993586 67.865 2 -0.06202994323190736 0.018416622182072025 0.19458201786804122 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 130091 13848 VSDMVEDLY True H1975_Epitope_Rep1 1069.4637774722498 1069.46268993586 58.413 2 -0.062064004191552065 0.01843450413647281 0.19466962098582857 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 35089 8100 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 35.983 2 -0.06206838565152235 0.01843450413647281 0.19468089155124155 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 127546 9402 VNRQAVAL True PC9_epitope_Rep3 869.5083000262498 869.50720993586 41.101 2 -0.062128284612201615 0.01843450413647281 0.19483500956502633 ['nc|ENSG00000198788|Q02817|MUC2'] 31640 13200 GEFNFSEV True NCI_RA007_Epitope_Rep3 927.3974121645899 927.39630993586 59.192 2 -0.0621373681116029 0.01843450413647281 0.19485838729656027 ['nc|ENSG00000136193|Q12765-3|SCRN1', 'ENSG00000136193|ENST00000242059|SCRN1', 'nc|ENSG00000136193|Q12765-2|SCRN1'] 105522 4216 SSAKPGPAL True NCI_RA007_Epitope_Rep4 826.4548674710599 826.45376993586 22.529 2 -0.06215684140218686 0.01843450413647281 0.19490851018986305 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 121467 6187 VEYETYKEAQA True H1975_Epitope_Rep2 1329.60886148281 1329.60776993586 28.768 2 -0.06218139589571088 0.01843450413647281 0.19497172242647082 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 9659 13188 AYEHKFYEI True PC9_epitope_Rep5 1198.5658744720197 1198.56421490379 55.732 3 -0.06219360369271927 0.01843450413647281 0.19500315418913794 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 64501 17315 LPQSFLLL True H1975_Epitope_Rep1 929.5586042636099 929.55750993586 72.064 2 -0.06222545440609931 0.018452380952380953 0.19508517498859557 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 142900 21572 YYVDFFKTL True PC9_epitope_Rep2 1194.5961119711399 1194.5950099358602 88.448 2 -0.06226892664826733 0.018452380952380953 0.19519715546252944 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 92119 16478 RLAVLFSGA True PC9_epitope_Rep4 932.5443511817999 932.54324993586 71.354 2 -0.06227362018111486 0.018452380952380953 0.1952092478009816 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7482995-7483061:+|nuORF', 'nc|ENSG00000129226|P34810-2|CD68', 'nc|ENSG00000129226|P34810-3|CD68'] 111424 14369 THSNTIVVSL True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 60.095 2 -0.06230150163825474 0.018452380952380953 0.1952810900803517 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 38854 4008 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 22.207 2 -0.062371269685848975 0.018452380952380953 0.1954609289698404 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 70011 18775 LVLYRTKV True PC9_epitope_Rep4 990.6226015025 990.62150993586 80.301 2 -0.06239272820584774 0.018452380952380953 0.19551626123333435 ['ENSG00000112234|ENST00000369244|FBXL4'] 96545 6771 SADYIGGSHY True H1975_Epitope_Rep2 1068.4512386426 1068.45014993586 30.96 2 -0.062401616059788424 0.018452380952380953 0.19553918183407487 ['ENSG00000120837|ENST00000240055|NFYB'] 74989 7654 NHQGTYVL True PC9_epitope_Rep2 930.4559301002199 930.45482993586 34.811 2 -0.06241845719407437 0.01847214810557859 0.19558261716770747 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 5980 11026 APHPPLSVV True PC9_epitope_Rep6 915.51780208079 915.51670993586 53.315 2 -0.06245381506108882 0.01847214810557859 0.19567382760933155 ['ENSG00000183856|ENST00000361170|IQGAP3'] 5211 20968 ALPDDLVEV True PC9_epitope_Rep5 969.5018772331299 969.50078993586 85.714 2 -0.06247278731709973 0.018490775134935456 0.19572277929599088 ['ENSG00000120756|ENST00000457734|PLS1'] 73437 16795 MVADKFTEL True PC9_epitope_Rep1 1052.52123277872 1052.52012993586 69.427 2 -0.06247910178410896 0.018490775134935456 0.19573907328219098 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 35096 8277 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 36.812 2 -0.06247989787722088 0.018490775134935456 0.1957411275937507 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 72492 18073 MLDQTLLEL True NCI_RA007_Epitope_Rep4 1074.5630975907 1074.56200993586 78.207 2 -0.06248562640681207 0.018490775134935456 0.19575591038450998 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 85278 5010 QEQLRPQTP True H1975_Epitope_Rep2 1095.56727145435 1095.5661699358602 24.354 2 -0.06253709859835449 0.018490775134935456 0.19588876627322543 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3'] 13995 8249 DRDSGGPVL True PC9_epitope_Rep1 914.4457593393399 914.44466993586 36.565 2 -0.06253985426868001 0.018505221262540263 0.19589588046104095 ['ENST00000471909.1_1_21:45217249-45223652:+|nuORF', 'ENST00000467112.5_1_21:45213150-45223652:+|nuORF', 'ENSG00000160214|ENST00000497547|RRP1'] 135074 6317 WEDDKVTEA True H1975_Epitope_Rep3 1091.4771190372699 1091.4760299358602 29.293 2 -0.06255697968552101 0.018505221262540263 0.19594009572009466 ['ENSG00000144224|ENST00000272638|UBXN4'] 138701 15190 YINGGELFY True H1975_Epitope_Rep2 1074.5022115862998 1074.5016749679298 63.585 1 -0.06259822197169815 0.018505221262540263 0.1960466008383684 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF'] 93900 17035 RRFMQTFVL True PC9_epitope_Rep4 1196.64883333368 1196.64772993586 73.517 2 -0.06259921907739623 0.018505221262540263 0.19604917620414627 ['G3BP1|p.A115S|1|0.19|ENSG00000145907|chr5:151791054-151791054|G/T|missense_variant', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 92080 4625 RKVSINNTGL True NCI_RA007_Epitope_Rep3 1100.63020606408 1100.62910993586 25.111 2 -0.06260966011126237 0.018505221262540263 0.19607614491401829 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 1486 7071 AEEKNNWMAA True H1975_Epitope_Rep2 1162.5077079729 1162.50660993586 32.127 2 -0.06263843482159809 0.018505221262540263 0.19615047978059375 ['ENSG00000115904|ENST00000402219|SOS1', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2', 'SOS2|p.Q742Tfs*14|1|0.03|ENSG00000100485|chr14:50150168-50150169|-/CACATCTCAAATTTGTTTCCCCTAGT|frameshift_variant'] 40126 12935 HPYLPINSA True PC9_epitope_Rep1 1010.51853035678 1010.51742993586 54.627 2 -0.06264483651951835 0.018505221262540263 0.1961670197620631 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 85699 9648 QGVVTTLENV True PC9_epitope_Rep6 1058.56078909158 1058.5596899358602 47.465 2 -0.06266440304361279 0.018505221262540263 0.19621757853261582 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'ENST00000492816.6_1_2:216226280-216244056:-|nuORF'] 119742 15577 VAYEAPSL True PC9_epitope_Rep4 848.4279840168799 848.42688993586 67.838 2 -0.06270151360810246 0.018505221262540263 0.19631349080112234 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 111925 19652 TIPNNLIGC True PC9_epitope_Rep5 943.47970231991 943.47860993586 80.648 2 -0.06273292366650517 0.018505221262540263 0.19639469129548132 ['ENSG00000169564|ENST00000303577|PCBP1'] 56134 14107 LAVHPSGVAL True PC9_epitope_Rep3 962.5549158654999 962.55380993586 59.348 2 -0.06275341524857994 0.018505221262540263 0.19644767608611935 ['ENSG00000187608|ENST00000649529|ISG15'] 119244 20527 VALGALVTV True PC9_epitope_Rep4 841.52730413533 841.52620993586 87.108 2 -0.06275828868626207 0.018505221262540263 0.1964602784806455 ['ENSG00000129473|ENST00000250405|BCL2L2'] 683 13570 AATTVLQEL True NCI_RA007_Epitope_Rep4 944.5178616504398 944.51676993586 59.403 2 -0.06281769337042248 0.018505221262540263 0.19661393271797564 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'nc|ENSG00000040341|Q9NUL3-4|STAU2', 'STAU2|p.K410Ifs*9|1|0.08|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant'] 20746 5527 EQEVNILKK True NCI_RA007_Epitope_Rep2 1099.62372370131 1099.62262993586 26.114 2 -0.0629061649684275 0.018505221262540263 0.19684289916658537 ['ENSG00000100345|ENST00000216181|MYH9'] 6192 18895 APNPVVFVA True PC9_epitope_Rep4 912.5069030439199 912.5063549679301 80.766 1 -0.06293467903000843 0.018505221262540263 0.19691672698121823 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 39197 11929 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45884993586 51.207 2 -0.06296582648178592 0.018505221262540263 0.1969973913592805 ['ENSG00000132646|ENST00000379143|PCNA'] 111834 15184 TILRSYEERLR True PC9_epitope_Rep1 1434.7943112670598 1434.79267490379 63.227 3 -0.06298955157196177 0.018542829012143092 0.19705884640502874 ['ENSG00000103269|ENST00000352681|RHBDL1', 'nc|ENSG00000103269|O75783|RHBDL1', 'ENST00000450775.2_1_16:727761-728049:+|nuORF'] 31735 4784 GEGSPPAVA True H1975_Epitope_Rep2 783.3762827971899 783.37573496793 23.49 1 -0.0630151078972194 0.018542829012143092 0.1971250572675177 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant'] 67559 22123 LSTRLTLLL True PC9_epitope_Rep3 1028.65938093404 1028.65828993586 90.394 2 -0.06305275228575125 0.018542829012143092 0.19722260903231076 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 108094 20778 SYATLLHVL True PC9_epitope_Rep1 1015.5702315764698 1015.56912993586 84.752 2 -0.06308332611198574 0.018542829012143092 0.1973018586049412 ['ENSG00000183840|ENST00000329321|GPR39'] 30048 19292 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6166049037902 79.011 3 -0.06309536366643323 0.018542829012143092 0.19733306585416308 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 29466 7940 FVEQHTPQL True NCI_RA007_Epitope_Rep4 1097.5505587610498 1097.54946993586 37.283 2 -0.06311583373304762 0.018542829012143092 0.19738614084586942 ['ENSG00000168878|ENST00000519937|SFTPB'] 116798 11874 TVEDPVTVEY True H1975_Epitope_Rep2 1150.5393849406598 1150.5382899358601 50.751 2 -0.06311956079498071 0.018542829012143092 0.19739580529422665 ['nc|ENSG00000101182|O14818-4|PSMA7', 'ENST00000484488.5_1_20:60714188-60718428:-|nuORF', 'ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8'] 8351 18153 ATLEKVIEI True PC9_epitope_Rep1 1014.5961119711399 1014.59500993586 74.615 2 -0.06313327363191075 0.018542829012143092 0.19743136567796354 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 52390 9127 KKLPPLPSL True NCI_RA007_Epitope_Rep5 991.64300259391 991.64190993586 41.757 2 -0.0632005489100173 0.018542829012143092 0.19760587864548482 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 107347 11166 SVLGKVNEI True PC9_epitope_Rep6 957.54949613189 957.54838993586 53.902 2 -0.06324134077563802 0.018561437332075395 0.19771173653342503 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 103050 7680 SPGADAELP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 34.493 2 -0.06324684640354437 0.018561437332075395 0.19772602654217222 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 100209 4776 SIVREKLYK True NCI_RA007_Epitope_Rep5 1134.6760936273397 1134.6744449037901 25.054 3 -0.06332767770732692 0.018561437332075395 0.19793589483825424 ['ENSG00000125482|ENST00000334270|TTF1'] 26536 9513 FIHQHFTEV True PC9_epitope_Rep4 1156.56654317836 1156.56490490379 44.202 3 -0.06333207666094763 0.018561437332075395 0.19794731984222763 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 139387 17463 YLNDLIHSV True PC9_epitope_Rep6 1072.55530978832 1072.5542099358602 79.793 2 -0.06335472716166184 0.018561437332075395 0.19800615394123833 ['ENSG00000108599|ENST00000225737|AKAP10'] 8525 18259 ATSVTFVGV True PC9_epitope_Rep4 879.4701831820299 879.46908993586 78.304 2 -0.06339798348679902 0.018601694046227364 0.19811853907820876 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 43192 16229 IFIDPGYQTF True NCI_RA007_Epitope_Rep3 1199.58627556343 1199.5851699358602 71.525 2 -0.06340506419227562 0.018601694046227364 0.1981369390946171 ['ENSG00000121741|ENST00000610343|ZMYM2'] 49049 6802 KEGMNIVEA True H1975_Epitope_Rep2 989.4851816231699 989.48408993586 31.082 2 -0.0634526490884303 0.0186210573807473 0.19826061932251665 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000454070.2_1_1:101736433-101736811:-|nuORF', 'ENST00000449839.1_1_19:12618945-12619074:+|nuORF', 'ENST00000585753.1_1_19:30412142-30412556:+|nuORF', 'ENST00000440938.1_1_2:174350595-174351021:-|nuORF', 'ENST00000420099.1_1_13:91924337-91924628:-|nuORF', 'ENST00000435399.1_1_1:45880815-45881013:+|nuORF', 'ENST00000418508.1_1_2:130254157-130254292:+|nuORF', 'ENST00000567565.3_1_15:76039466-76039598:+|nuORF', 'ENST00000562009.1_1_15:74654250-74654382:+|nuORF', 'ENST00000567559.1_1_16:77926680-77926809:+|nuORF', 'ENST00000550612.1_1_12:31014923-31015109:+|nuORF'] 24472 6870 FAEDLTNR True PC9_epitope_Rep1 964.46140940348 964.46030993586 31.23 2 -0.06346800586210337 0.0186210573807473 0.19830054332839472 ['ENSG00000136051|ENST00000332180|WASHC4', 'nc|ENSG00000136051|Q2M389-2|WASHC4', 'ENST00000311317.8_1_12:105501518-105541426:+|nuORF'] 106817 12467 SVALVIHNV True PC9_epitope_Rep6 950.5549158655001 950.55380993586 59.38 2 -0.06349554523284998 0.0186210573807473 0.19837215079205575 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2'] 120272 13144 VEDEFDLEA True H1975_Epitope_Rep2 1065.4502355830898 1065.4491299358601 55.68 2 -0.06353653891501786 0.018637360834888154 0.19847876945686915 ['nc|ENSG00000163950|Q14493-2|SLBP', 'ENSG00000163950|ENST00000489418|SLBP'] 8872 20039 AVFPDDMPTL True PC9_epitope_Rep6 1104.51614739828 1104.5150499358601 89.747 2 -0.06354575452581207 0.018637360834888154 0.19850274246200864 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 64591 8829 LPSQPPPAA True PC9_epitope_Rep3 876.4705175351999 876.46942993586 38.91 2 -0.06356063453398646 0.018637360834888154 0.19854145404091253 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD'] 64359 23077 LPLLIAPALAA True PC9_epitope_Rep3 1061.68486740589 1061.68376993586 94.034 2 -0.06356972059573049 0.018637360834888154 0.1985650943168821 ['ENSG00000168140|ENST00000304735|VASN'] 13495 11199 DNKTSQPITL True PC9_epitope_Rep4 1115.58225281215 1115.5811499358601 50.855 2 -0.06357400225111895 0.018637360834888154 0.1985762349634948 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'SDK2|p.P1051Lfs*33|1|0.18|ENSG00000069188|chr17:73398361-73398371|GCGGGCATCGG/-|frameshift_variant', 'SDK2|p.S1083Vfs*66|1|0.28|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 76902 13880 NRDNVGLVL True PC9_epitope_Rep2 998.5508931142199 998.5503449679301 58.67 1 -0.06359912427299294 0.018637360834888154 0.19864160839578002 ['ENSG00000013523|ENST00000251089|ANGEL1'] 19920 16497 ELVEHIISF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 68.697 2 -0.06365044749980792 0.018637360834888154 0.19877520192395118 ['nc|ENSG00000106336|O75426-2|FBXO24', 'nc|ENSG00000106336|O75426-4|FBXO24', 'ENSG00000106336|ENST00000241071|FBXO24', 'nc|ENSG00000106336|O75426-3|FBXO24', 'ENST00000474649.1_1_7:100184248-100189648:+|nuORF', 'FBXO24|p.T215Pfs*24|1|0.57|ENSG00000106336|chr7:100592866-100592866|T/-|frameshift_variant'] 128202 12387 VPMSALKSV True PC9_epitope_Rep3 930.5208388559 930.51974993586 52.677 2 -0.06367454362467047 0.018637360834888154 0.19883794151732376 ['ENSG00000108256|ENST00000225388|NUFIP2'] 29853 13765 FVTEGSHFVEA True PC9_epitope_Rep1 1221.56660274801 1221.56550993586 57.792 2 -0.06368485104199842 0.018637360834888154 0.19886478262614501 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 8746 21864 AVDAFFTAV True PC9_epitope_Rep5 939.4701831820299 939.46908993586 89.136 2 -0.0637222238089852 0.018637360834888154 0.19896212088354567 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 17117 11990 EGLVQELQKKA True NCI_RA007_Epitope_Rep5 1241.6979512707296 1241.6968499358602 52.78 2 -0.06372969043259007 0.018637360834888154 0.1989815711538407 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 134720 14924 VYTRHMTWI True PC9_epitope_Rep5 1205.6015487880898 1205.59990490379 62.409 3 -0.06388939219255789 0.018656333927875843 0.1993978489534656 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000455605.2_1_6:43488011-43488227:+|nuORF', 'ENST00000481352.6_1_6:43488011-43488806:+|nuORF'] 116410 6130 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 28.974 2 -0.06393477907869065 0.018656333927875843 0.19951624506363472 ['ENSG00000065183|ENST00000349139|WDR3'] 8721 17730 AVASVLSFL True H1975_Epitope_Rep3 905.52221875489 905.52167496793 74.125 1 -0.0639567810650486 0.018656333927875843 0.1995736538548541 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF', 'nc|ENSG00000169247|Q8TF17-4|SH3TC2'] 57130 18697 LDTFNYEQTL True PC9_epitope_Rep6 1242.5768330785397 1242.5757299358602 84.561 2 -0.06395754298108236 0.018656333927875843 0.19957564205723444 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 55610 20879 LAIGASFTV True PC9_epitope_Rep5 877.49091862661 877.49037496793 85.363 1 -0.06397631723485464 0.01867377267602747 0.1996246366190877 ['nc|ENSG00000104635|Q15043-3|SLC39A14', 'nc|ENSG00000104635|Q15043-2|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 109306 11353 TAVTVNQSL True PC9_epitope_Rep4 931.4974605590301 931.49691496793 51.447 1 -0.06398286240780075 0.01867377267602747 0.1996417189614627 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 131213 18186 VTERNLLEV True PC9_epitope_Rep1 1071.59242357303 1071.5913299358601 74.743 2 -0.06398871451892692 0.01867377267602747 0.1996569931793452 ['VPS45|p.S343T|1|0.11|ENSG00000136631|chr1:150082807-150082807|G/C|missense_variant'] 16825 7553 EEYEYMNRRRR True PC9_epitope_Rep1 1600.75285746124 1600.75120490379 33.871 3 -0.0639939622906105 0.01867377267602747 0.19967069061796824 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 118392 18513 TYPAELNNI True PC9_epitope_Rep5 1033.50802524273 1033.50747496793 76.234 1 -0.06399470369883654 0.01867377267602747 0.19967262584334777 ['ENSG00000106546|ENST00000242057|AHR'] 142754 18011 YYQNYFEKL True PC9_epitope_Rep4 1266.5920892198599 1266.59098993586 77.337 2 -0.06399634133085413 0.01867377267602747 0.19967690043203443 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 137409 5270 YEAPGVREA True H1975_Epitope_Rep3 990.4770594676198 990.47651496793 25.355 1 -0.06402918172862986 0.01867377267602747 0.1997626323147739 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 43570 4393 IGSGC[Carbamidomethyl]NLDSAR True H1975_Epitope_Rep3 1148.5244209456298 1148.5233299358601 22.018 2 -0.0640324489307096 0.01867377267602747 0.1997711626975891 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 11068 4213 DAVTYTEHAK True PC9_epitope_Rep3 1133.53530261973 1133.53366490379 21.322 3 -0.06405820135415256 0.01869273811719855 0.1998384073403174 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 76321 11364 NPSSVIHVV True PC9_epitope_Rep2 950.51853035678 950.51742993586 49.034 2 -0.06406213288329209 0.01869273811719855 0.19984867447393695 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP', 'HINFP|p.Q469L|1|0.54|ENSG00000172273|chr11:119134350-119134350|A/T|missense_variant'] 42829 15801 IEQEGYWLP True H1975_Epitope_Rep3 1133.53932537101 1133.5387749679298 66.227 1 -0.06406433364135886 0.01869273811719855 0.19985442185455465 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 31935 9165 GEMWSEQSA True H1975_Epitope_Rep3 1023.39676054159 1023.3956699358599 40.243 2 -0.06407238915009153 0.01869273811719855 0.19987545999041478 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 137235 16754 YAYTQALLL True H1975_Epitope_Rep2 1054.5698972233 1054.5688099358601 69.682 2 -0.06417054881404838 0.018709399782782434 0.20013191987496 ['nc|ENSG00000157625|Q8N5C8-2|TAB3', 'ENSG00000157625|ENST00000288422|TAB3'] 54703 13082 KYLYVDKNF True PC9_epitope_Rep1 1188.6179100448796 1188.6168099358601 55.187 2 -0.06418310604629027 0.018709399782782434 0.20016474146158714 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 140454 14921 YRHRRKYF True NCI_RA007_Epitope_Rep5 1224.6628436050398 1224.6617499358601 64.061 2 -0.06419780725429207 0.018709399782782434 0.20020317078844255 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 75267 21321 NIIDELPPC True PC9_epitope_Rep5 1012.4899326504399 1012.4888299358599 87.066 2 -0.06422214296017374 0.018709399782782434 0.20026679418597257 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 139801 10715 YPIEHGIITN True PC9_epitope_Rep4 1155.5924235730297 1155.5913299358601 48.969 2 -0.06424560930999104 0.018709399782782434 0.20032815565657358 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 35099 7294 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 35.373 2 -0.0642458763748296 0.018709399782782434 0.20032885405830317 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 120389 4090 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 20.858 2 -0.06425773135272178 0.018709399782782434 0.20035985743080967 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 35030 19620 GQVEDVVGNL True PC9_epitope_Rep3 1028.5138388991597 1028.51274993586 80.705 2 -0.06426038785062521 0.018709399782782434 0.20036680513189245 ['ENSG00000196878|ENST00000356082|LAMB3'] 57615 7908 LEEDHACIP True H1975_Epitope_Rep3 1025.4487961144498 1025.4476899358601 35.391 2 -0.06427153737062984 0.018709399782782434 0.2003959666502973 ['ENSG00000167658|ENST00000309311|EEF2'] 95772 15350 RYIDRIHIF True PC9_epitope_Rep2 1231.68257599011 1231.68094490379 64.324 3 -0.06435077741893856 0.018709399782782434 0.20060328833464072 ['ENSG00000174231|ENST00000304992|PRPF8'] 136265 5271 WRYHKEER True NCI_RA007_Epitope_Rep1 1202.5944892616997 1202.59285490379 24.584 3 -0.06436198545985289 0.018728356863307583 0.2006326226358651 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'nc|ENSG00000111596|Q9NZN8-3|CNOT2', 'nc|ENSG00000111596|Q9NZN8-2|CNOT2'] 32905 6089 GHVFEESQVAG True NCI_RA007_Epitope_Rep3 1158.53055159246 1158.5294499358602 30.935 2 -0.06441525306748323 0.018728356863307583 0.2007720709506786 ['ENSG00000167658|ENST00000309311|EEF2'] 142826 9028 YYSPTKNEI True PC9_epitope_Rep2 1113.53423999057 1113.5331499358601 40.075 2 -0.0644406464416459 0.018728356863307583 0.20083856723154814 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1'] 103288 15372 SPLNSPLSSA True PC9_epitope_Rep1 971.49237517859 971.49126993586 63.946 2 -0.06444155866859173 0.018728356863307583 0.2008409562651045 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 84463 15919 QAIEKLEEI True PC9_epitope_Rep1 1071.58119018299 1071.58008993586 66.043 2 -0.06450836039400717 0.018748463240717973 0.2010159474434925 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B', 'ANKRD18A|p.E833A|1|0.3|ENSG00000180071|chr9:38577898-38577898|T/G|missense_variant', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 7909 4298 ATALKLSQD True NCI_RA007_Epitope_Rep2 945.51311062317 945.51200993586 21.356 2 -0.06451993131835282 0.018768568794180925 0.20104626699474953 ['ENSG00000120051|ENST00000369704|CFAP58', 'CFAP58|p.V618Ffs*7|1|0.12|ENSG00000120051|chr10:104400713-104400713|C/-|frameshift_variant'] 1005 8298 AEAAVVAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 36.85 1 -0.06455242098084689 0.018788288565164832 0.20113141428865586 ['ENSG00000211450|ENST00000534355|SELENOH'] 20240 16708 ENLRTGLEL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 69.274 2 -0.06457282098446897 0.018788288565164832 0.20118488808464097 ['ENST00000564731.5_1_16:46761123-46772038:-|nuORF', 'ENSG00000140795|ENST00000394809|MYLK3'] 115311 13110 TRHPFLTAL True PC9_epitope_Rep2 1054.59236400338 1054.59126993586 55.703 2 -0.06461492999766934 0.01880800672007212 0.20129529248668268 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 128775 17887 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 74.105 2 -0.0646208926510019 0.01880800672007212 0.20131092857762184 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 49270 8043 KEQLPPLAA True H1975_Epitope_Rep3 965.5545815123298 965.55348993586 35.911 2 -0.06463089872411493 0.018827723259101432 0.2013371694319803 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 8874 19641 AVFPFQPGSV True PC9_epitope_Rep6 1047.53893144819 1047.5378299358601 88.208 2 -0.0646508681909853 0.018827723259101432 0.2013895450246337 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 38186 5765 HDPSAVAV True PC9_epitope_Rep5 794.3922672145001 794.39116993586 27.168 2 -0.06470751855236913 0.01884319187284942 0.20153816879226868 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 120384 4418 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 22.102 2 -0.06471148701405655 0.01884319187284942 0.20154858249372387 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 132054 12344 VTTELSTSI True PC9_epitope_Rep5 949.49679185269 949.49568993586 52.474 2 -0.06473836595370173 0.01884319187284942 0.20161912397618495 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 94231 9604 RRQEAIYEM True PC9_epitope_Rep1 1194.5815416194998 1194.5798849037901 41.797 3 -0.06474891913059595 0.01884319187284942 0.20164682371944043 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000465087.1_1_10:5494419-5494892:+|nuORF'] 44958 17829 IPAALPVAA True PC9_epitope_Rep5 821.50108938749 821.49998993586 73.598 2 -0.06475787352372286 0.01884319187284942 0.20167032870475707 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 89797 10968 RALKLLTTL True NCI_RA007_Epitope_Rep4 1027.67536535135 1027.6742699358601 49.056 2 -0.06477486670732267 0.01884319187284942 0.20171493952449007 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'nc|ENSG00000117385|Q32P28-2|P3H1', 'ENST00000495874.5_1_1:43222117-43232675:-|nuORF', 'P3H1|p.K158Nfs*17|1|0.06|ENSG00000117385|chr1:42762466-42762467|AC/-|frameshift_variant', 'ENST00000492956.1_1_1:43227954-43232675:-|nuORF'] 60201 7606 LGPLQVAR True H1975_Epitope_Rep3 852.51813643396 852.51702993586 34.238 2 -0.0647976383299716 0.01884319187284942 0.20177472878889752 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB'] 128449 10343 VPSDETLLG True H1975_Epitope_Rep2 929.4705771048499 929.46948993586 44.792 2 -0.06482937847529605 0.01884319187284942 0.2018580826154111 ['ENSG00000171872|ENST00000372299|KLF17', 'KLF17|p.V336Yfs*18|1|0.26|ENSG00000171872|chr1:44130590-44130590|G/-|frameshift_variant'] 7122 7628 AQVRGGYVL True NCI_RA007_Epitope_Rep4 961.5345147740899 961.53340993586 35.994 2 -0.06483372221172999 0.01884319187284942 0.20186949136194193 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 11727 10199 DHARTITVAL True PC9_epitope_Rep6 1095.60365696307 1095.60254993586 49.873 2 -0.06483461932282344 0.01884319187284942 0.2018718476538486 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 35606 14257 GTASGFYTV True PC9_epitope_Rep6 901.4181476091701 901.41704993586 66.73 2 -0.06484292186436431 0.01884319187284942 0.20189365529355607 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 85309 8064 QERFTQDTQP True H1975_Epitope_Rep3 1248.5734790335998 1248.57184490379 35.992 3 -0.0648673701432111 0.01884319187284942 0.2019578794440494 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 27188 24242 FLLPILSQI True PC9_epitope_Rep3 1042.64266824074 1042.6415699358602 98.549 2 -0.06487441094272596 0.01884319187284942 0.20197637734695548 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y', 'DDX3X|p.V422Kfs*13|1|0.5|ENSG00000215301|chrX:41345494-41345497|TGGG/-|frameshift_variant', 'ENST00000463199.1_1_Y:15025644-15026909:+|nuORF', 'nc|ENSG00000067048|O15523-3|DDX3Y', 'ENST00000472510.5_1_Y:15024878-15026576:+|nuORF'] 61455 9025 LIYNEALKG True NCI_RA007_Epitope_Rep1 1019.5651461960299 1019.56404993586 39.109 2 -0.06497873569824407 0.01885787997297242 0.20225057653805356 ['ENSG00000197956|ENST00000368719|S100A6'] 114245 16525 TPMSVLQQA True PC9_epitope_Rep2 973.49026700361 973.48916993586 68.803 2 -0.06499232166997321 0.01885787997297242 0.20228630037621032 ['ENSG00000167978|ENST00000301740|SRRM2'] 32486 15074 GGDDSFNTF True PC9_epitope_Rep6 958.3668403123 958.36574993586 70.036 2 -0.0650311737015445 0.01885787997297242 0.20238848015551622 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 25412 8139 FEDESPPAP True H1975_Epitope_Rep1 987.4185415319898 987.41744993586 36.247 2 -0.06504290292324032 0.01885787997297242 0.2024193334288259 ['ENSG00000105464|ENST00000263269|GRIN2D'] 101416 6301 SLKPHSVPP True H1975_Epitope_Rep3 960.53926580136 960.53816993586 29.241 2 -0.0650556616445915 0.01885787997297242 0.20245289778502765 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA', 'MGA|p.H2273Rfs*60|1|0.26|ENSG00000174197|chr15:41750425-41750431|ACTTACT/-|frameshift_variant', 'MGA|p.A2391Qfs*13|1|0.36|ENSG00000174197|chr15:41757814-41757814|A/-|frameshift_variant', 'MGA|p.G1370Afs*26|1|0.34|ENSG00000174197|chr15:41736371-41736371|G/-|frameshift_variant', 'MGA|p.L1900Yfs*10|1|0.13|ENSG00000174197|chr15:41749300-41749301|-/TACA|frameshift_variant', 'MGA|p.T2133Sfs*24|1|0.22|ENSG00000174197|chr15:41750003-41750069|CACCTTTAAGGAAGAAAGTAAATTTGAATTGTCAGGAAGCAAAGTTATGGAGCAGCAATCTAATCTA/-|frameshift_variant', 'MGA|p.I918Hfs*13|1|0.18|ENSG00000174197|chr15:41711016-41711022|CATTTTA/-|frameshift_variant', 'MGA|p.E1222Kfs*14|1|0.47|ENSG00000174197|chr15:41729168-41729168|G/-|frameshift_variant', 'MGA|p.E1249Rfs*42|1|0.5|ENSG00000174197|chr15:41729244-41729244|A/-|frameshift_variant'] 57355 13950 LEAGVSMLP True H1975_Epitope_Rep2 915.47355431031 915.47300496793 58.808 1 -0.06507315708540759 0.01885787997297242 0.20249892814557618 ['ENST00000441052.1_1_7:44079131-44079272:+|nuORF'] 54548 4823 KYIQRQETI True NCI_RA007_Epitope_Rep4 1177.64552177505 1177.6444299358602 24.987 2 -0.06512252697235792 0.01885787997297242 0.20262885184203078 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 88154 10005 QRVDPDVL True PC9_epitope_Rep2 940.4977949121999 940.49668993586 43.813 2 -0.06517113494011063 0.01885787997297242 0.20275681649498678 ['ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 69487 18093 LVAPPLPAA True PC9_epitope_Rep4 847.51673945163 847.51619496793 77.662 1 -0.06518077915128437 0.01885787997297242 0.20278221114074022 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 32965 12161 GIDVWEHAY True H1975_Epitope_Rep1 1088.4927095317598 1088.4916099358602 51.795 2 -0.06518339375159575 0.01885787997297242 0.20278909608293588 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2', 'ENST00000541573.5_1_6:160103527-160113001:-|nuORF', 'ENST00000535459.5_1_6:160103527-160109299:-|nuORF', 'ENST00000546260.5_1_6:160103527-160113680:-|nuORF'] 103189 19766 SPILTSSTL True PC9_epitope_Rep4 917.5069626135701 917.50641496793 84.154 1 -0.06529778129503364 0.01885787997297242 0.20309043840715602 ['ENST00000544327.1_1_12:125284722-125292339:-|nuORF'] 94703 9132 RSDEIVLTV True PC9_epitope_Rep6 1030.56587447202 1030.56476993586 45.23 2 -0.06531589073247965 0.01885787997297242 0.20313816905021098 ['nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL', 'CTCFL|p.E210K|1|0.26|ENSG00000124092|chr20:57523194-57523194|C/T|missense_variant', 'CTCFL|p.H279Tfs*13|1|0.2|ENSG00000124092|chr20:57519297-57519297|G/-|frameshift_variant'] 140742 14544 YSDDIPHAL True PC9_epitope_Rep5 1029.47672511445 1029.47562993586 60.943 2 -0.06532865957945798 0.01885787997297242 0.20317182742412876 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 2809 6077 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 28.353 2 -0.06537057619336248 0.01885787997297242 0.20328234073907878 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 12138 13049 DIDLDALAA True H1975_Epitope_Rep2 915.4549270407099 915.45382993586 55.315 2 -0.0653795555859414 0.01885787997297242 0.203306019353359 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 6103 15192 APLYQVAAA True PC9_epitope_Rep5 902.4861675993398 902.48506993586 63.443 2 -0.06538902761967609 0.018877195856025552 0.20333099874653193 ['ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 6303 5760 APRLQSEVA True PC9_epitope_Rep2 969.5243440132099 969.52324993586 27.55 2 -0.06539397704325174 0.018877195856025552 0.2033440519223251 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 78462 20342 NYMPGQLTI True PC9_epitope_Rep2 1035.5059170677498 1035.50537496793 83.667 1 -0.06540156311647129 0.018877195856025552 0.20336405968428786 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 138709 15950 YIPGRQIIEV True PC9_epitope_Rep4 1186.6710082468999 1186.66990993586 69.281 2 -0.06543445934736296 0.018894575230296827 0.20345083414649281 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 76677 14988 NQSEKIFSL True PC9_epitope_Rep4 1064.55022440788 1064.54912993586 65.591 2 -0.06543645589433143 0.018894575230296827 0.20345610135772899 ['ENSG00000130818|ENST00000253115|ZNF426'] 98905 18493 SGYPGLLNGV True PC9_epitope_Rep6 975.5025459394699 975.50144993586 83.774 2 -0.06546444802565725 0.018894575230296827 0.20352995718786726 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 107812 6359 SVTSKGVVTC True PC9_epitope_Rep3 979.5008316873099 979.49972993586 29.486 2 -0.06547626679783174 0.018894575230296827 0.2035611449612758 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 25789 6886 FEVTKTAVA True H1975_Epitope_Rep3 964.5229470308799 964.52184993586 31.447 2 -0.06550293877783349 0.018894575230296827 0.20363153777794896 ['ENSG00000074842|ENST00000262947|MYDGF'] 77893 19488 NVIDNLIVA True PC9_epitope_Rep6 969.5494961318899 969.5489449679301 87.623 1 -0.06551188269137949 0.018894575230296827 0.20365514566830728 ['ENSG00000143621|ENST00000361891|ILF2'] 64952 5294 LQEPVQEQP True H1975_Epitope_Rep3 1066.5294889632999 1066.52838993586 25.442 2 -0.06553413282507209 0.018894575230296827 0.20371388265786258 ['ENSG00000155761|ENST00000336338|SPAG17'] 68965 8755 LTPERFHNL True PC9_epitope_Rep2 1125.59309227937 1125.59143490379 39.033 3 -0.06555373154956975 0.018894575230296827 0.20376562823310507 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 8701 7191 AVAPAGILK True NCI_RA007_Epitope_Rep5 838.5276384885 838.52654993586 34.339 2 -0.0655889403594095 0.018911948913176962 0.20385860696556451 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3', 'ENST00000593331.1_1_19:8399202-8399642:-|nuORF'] 59790 22510 LGELGLVDL True PC9_epitope_Rep2 927.5276980581499 927.5271449679301 92.074 1 -0.06559867404071378 0.018911948913176962 0.20388431569441307 ['ENST00000379619.5_1_2:28635552-28635666:+|nuORF'] 120675 12589 VEIPDPVEA True H1975_Epitope_Rep2 967.4862271689899 967.48512993586 53.521 2 -0.06565247592585967 0.018911948913176962 0.20402645087648003 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 84341 15434 PYVDNSYKW True PC9_epitope_Rep5 1170.53457434374 1170.53346993586 64.377 2 -0.0656567769038792 0.018911948913176962 0.2040378157156902 ['ENSG00000103642|ENST00000261893|LACTB'] 24743 12068 FAQTLQETL True NCI_RA007_Epitope_Rep3 1049.53932537101 1049.53822993586 54.589 2 -0.06567081384292313 0.018911948913176962 0.20407490918936858 ['ANLN-EEPD1|2|fusion', 'ENSG00000122547|ENST00000242108|EEPD1'] 105178 14177 SRGDFVVEY True PC9_epitope_Rep2 1070.50327421546 1070.50277496793 59.799 1 -0.06569826026920761 0.018911948913176962 0.2041474490180994 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 118044 13919 TYFDKNYNL True PC9_epitope_Rep6 1176.5451390274397 1176.5440499358601 65.381 2 -0.0657491500461704 0.018911948913176962 0.2042819870732701 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 53671 4393 KSDSGKPYYY True H1975_Epitope_Rep2 1206.55570371114 1206.55405490379 22.008 3 -0.06575211582811571 0.018911948913176962 0.20428982929179518 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 25429 9820 FEDSSRIIP True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 42.756 2 -0.06584131144853464 0.01895172018583328 0.20452576236789685 ['ENSG00000009335|ENST00000348165|UBE3C', 'nc|ENSG00000009335|Q15386-2|UBE3C', 'UBE3C|p.S489T|1|0.11|ENSG00000009335|chr7:157207444-157207444|T/A|missense_variant'] 78488 7478 NYNNQSSNF True PC9_epitope_Rep4 1086.4366512076201 1086.43554993586 36.122 2 -0.06584158224195084 0.01895172018583328 0.20452647888182685 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 104056 4648 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44521496793 22.935 1 -0.06588081096087173 0.01895172018583328 0.20463029217854561 ['ENSG00000130935|ENST00000253247|NOL11'] 38920 8538 HHGGPLTL True PC9_epitope_Rep1 830.4398861132601 830.43878993586 37.68 2 -0.06597167875911795 0.018987600769325205 0.20487087465168136 ['ENST00000322310.9_1_9:140084508-140084799:+|nuORF'] 60676 16717 LHLYLSHSIF True PC9_epitope_Rep4 1228.6604435632 1228.65880490379 72.271 3 -0.06598509156917132 0.018987600769325205 0.2049063999749814 ['ENST00000592643.5_1_17:73774540-73774585:-|nuORF'] 19044 13890 ELFKEYQEEAY True H1975_Epitope_Rep1 1447.6507262947903 1447.64962993586 58.577 2 -0.06598522629965131 0.018987600769325205 0.20490675684121223 ['ENSG00000243710|ENST00000372492|CFAP57', 'nc|ENSG00000243710|Q96MR6-2|CFAP57'] 134274 10244 VYNKVHITL True PC9_epitope_Rep4 1085.62332977849 1085.62222993586 47.084 2 -0.06598606949651818 0.018987600769325205 0.20490899025977172 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 87066 11126 QNIKELNTL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 47.787 2 -0.06601004530409055 0.018987600769325205 0.20497250191837907 ['ENSG00000128313|ENST00000249044|APOL5'] 5724 2540 APAPKPEAA True PC9_epitope_Rep6 850.4548674710599 850.45376993586 14.699 2 -0.06602131545502425 0.018987600769325205 0.20500236024194018 ['ENSG00000205903|ENST00000382252|ZNF316'] 70547 18260 LVYQEPIPTA True PC9_epitope_Rep2 1129.60192562757 1129.60082993586 75.558 2 -0.066034314692979 0.018987600769325205 0.2050368025123809 ['ENSG00000106588|ENST00000223321|PSMA2', 'ENST00000433579.1_1_7:42952135-42964395:-|nuORF', 'ENST00000411875.1_1_7:42961455-42966220:-|nuORF'] 116187 10572 TSVPPGSAL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 48.405 2 -0.06603849182053932 0.018987600769325205 0.20504787075427056 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.G1446W|1|0.48|ENSG00000181555|chr3:47120300-47120300|C/A|missense_variant'] 55547 13116 LAGPVVEI True H1975_Epitope_Rep2 796.4694549060399 796.46890496793 55.572 1 -0.06607708132317114 0.018987600769325205 0.20515013818755115 ['ENSG00000197403|ENST00000641846|OR6N1'] 67284 14466 LSRSGELAV True PC9_epitope_Rep1 930.51344497634 930.51234993586 60.466 2 -0.06610664944669019 0.018987600769325205 0.20522851707715092 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000582450.1_1_17:7127649-7127876:+|nuORF'] 84718 15950 QDQIVSLGATV True PC9_epitope_Rep1 1129.59790287629 1129.5968099358602 66.161 2 -0.0661462540968136 0.018987600769325205 0.2053335269731314 ['ENST00000525625.1_1_11:125884983-125893371:-|nuORF', 'ENSG00000064309|ENST00000531738|CDON', 'nc|ENSG00000064309|Q4KMG0|CDON'] 34771 10225 GQFTGSTGV True PC9_epitope_Rep1 852.3977465177599 852.3971949679301 44.211 1 -0.06617807266362678 0.018987600769325205 0.2054179142247403 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 107765 18987 SVSTQLSLV True PC9_epitope_Rep2 932.51786165044 932.51731496793 78.399 1 -0.06618542928668177 0.018987600769325205 0.20543742777258242 ['ENSG00000214194|ENST00000397764|SMIM30'] 54097 17658 KVLNELTQL True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 72.716 2 -0.0662599071375226 0.019006505994516962 0.20563503975787334 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 40116 18915 HPYLFPVA True PC9_epitope_Rep5 942.4963383602199 942.49524993586 77.777 2 -0.06626017697550182 0.019006505994516962 0.20563575591192365 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 129278 14183 VQVPHHLLSSV True PC9_epitope_Rep1 1214.6771562565002 1214.67550490379 59.377 3 -0.06626296888324185 0.019006505994516962 0.20564316575890607 ['ENST00000441339.2_11:69061685-69061946:+|nuORF'] 1004 8202 AEAAVVAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 36.491 1 -0.06626581891973365 0.019006505994516962 0.2056507300362325 ['ENSG00000211450|ENST00000534355|SELENOH'] 55574 6611 LAHAAFSAA True PC9_epitope_Rep4 857.43955176009 857.43844993586 32.588 2 -0.0663131068730434 0.019065542917928155 0.20577625963022608 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 5936 14852 APGSGTFPLG True PC9_epitope_Rep4 902.4497820906199 902.44868993586 65.067 2 -0.06635276158177801 0.019065542917928155 0.20588155919449277 ['ENST00000336576.9_2_2:220151153-220151270:+|nuORF'] 13650 19104 DPNTVFALVNY True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 79.621 2 -0.06638687488926055 0.019065542917928155 0.20597216815122263 ['CON__P34955'] 37953 5624 HADEHRLKYQC True H1975_Epitope_Rep1 1398.64626713438 1398.6451699358602 26.7 2 -0.06638839380957648 0.019065542917928155 0.20597620310027362 ['ENSG00000198018|ENST00000370489|ENTPD7'] 76932 10281 NRDQYSHLL True PC9_epitope_Rep5 1144.56252042708 1144.5614299358601 44.534 2 -0.06639792549746769 0.019065542917928155 0.20600152464335025 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 64057 20163 LPAQPLPLSV True PC9_epitope_Rep4 1033.6171817688898 1033.6160899358601 85.695 2 -0.06640738265978857 0.019065542917928155 0.2060266499230487 ['ENSG00000074181|ENST00000263388|NOTCH3'] 44541 14489 ILMQGMNILI True NCI_RA007_Epitope_Rep5 1144.63482306232 1144.6337299358602 62.411 2 -0.06645198374989353 0.019084828277456174 0.20614516676790487 ['DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant'] 93520 12046 RQLEAIVRI True PC9_epitope_Rep4 1096.6716769532397 1096.6705699358602 54.141 2 -0.06645688109154693 0.019084828277456174 0.206158182613789 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 67798 20799 LTAAATLSV True PC9_epitope_Rep1 845.48583324617 845.48472993586 84.829 2 -0.06647748859820186 0.019084828277456174 0.2062129569729718 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 128049 8268 VPKNSDPWAA True PC9_epitope_Rep4 1083.53490869691 1083.53380993586 39.263 2 -0.06652053869332418 0.019122218586387435 0.2063274095110212 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 130724 23230 VSVQLLLV True PC9_epitope_Rep1 869.5586042636099 869.55750993586 94.153 2 -0.06653936450517073 0.019122218586387435 0.20637747075695914 ['ENSG00000183303|ENST00000329434|OR5P2'] 128830 20232 VQCETLEDLKL True PC9_epitope_Rep1 1289.65370350025 1289.65260993586 82.652 2 -0.06654250115957426 0.019122218586387435 0.20638581234806036 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000561658.5_1_16:67486328-67515058:-|nuORF'] 108591 18836 SYPDLLPTF True NCI_RA007_Epitope_Rep5 1051.52261267771 1051.5215099358602 79.297 2 -0.06654796415743068 0.019122218586387435 0.20640034104550636 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 103613 10156 SPTELPSA True PC9_epitope_Rep2 800.39159850816 800.39050993586 44.402 2 -0.06658001922097571 0.019122218586387435 0.20648560212810466 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11', 'ENST00000488544.1_1_20:3209968-3210393:-|nuORF'] 140079 8049 YQLDQDHNV True PC9_epitope_Rep4 1130.49925146418 1130.49814993586 38.41 2 -0.06663781238485121 0.019122218586387435 0.20663937184644557 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'ENST00000534794.1_1_11:77413524-77475723:-|nuORF'] 89769 4816 RAIEALHGHEL True NCI_RA007_Epitope_Rep3 1244.6625688215202 1244.66092490379 25.912 3 -0.0666670311403207 0.019122218586387435 0.20671713819311954 ['nc|ENSG00000239306|Q96PK6-5|RBM14', 'nc|ENSG00000239306|Q96PK6-3|RBM14', 'nc|ENSG00000239306|Q96PK6-4|RBM14', 'ENST00000511114.1_1_11:66384104-66406046:+|nuORF', 'nc|ENSG00000239306|Q96PK6-2|RBM14', 'ENST00000512283.1_1_11:66384104-66384788:+|nuORF', 'ENSG00000239306|ENST00000310137|RBM14'] 27796 6457 FQDDDQTRV True PC9_epitope_Rep3 1122.4941660837399 1122.4930699358601 29.862 2 -0.0666739117619472 0.019122218586387435 0.2067354534875193 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 63540 21763 LM[Oxidation]ALLTLGI True PC9_epitope_Rep1 959.57254045603 959.57144993586 88.545 2 -0.06667938532423288 0.019122218586387435 0.20675002402380147 ['ENSG00000131966|ENST00000254286|ACTR10'] 5657 6586 APAEEPAAAAA True PC9_epitope_Rep1 967.4610750503098 967.46052496793 30.138 1 -0.06669456202145532 0.019141495736109123 0.20679042714397824 ['ENSG00000277443|ENST00000612661|MARCKS'] 64890 11105 LQEDPPAGV True PC9_epitope_Rep2 924.4552613938798 924.45416993586 48.038 2 -0.0667066903676854 0.019141495736109123 0.20682271816237596 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 97544 16547 SEEPWTVLP True H1975_Epitope_Rep2 1056.51277627 1056.51227496793 68.873 1 -0.06673692156854602 0.019141495736109123 0.20690321920389756 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF'] 5728 2548 APAPPKAEA True PC9_epitope_Rep4 850.4548674710599 850.45376993586 14.719 2 -0.06676142441126133 0.019181219582021184 0.20696847930630624 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF', 'ENST00000399247.6_1_6:29694709-29694913:-|nuORF', 'ENST00000606975.1_1_8:163470-182153:-|nuORF'] 114239 17672 TPMPPISSV True PC9_epitope_Rep5 927.47355431031 927.47244993586 72.989 2 -0.06677770973260828 0.019181219582021184 0.20701185945765951 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 29457 23615 FVEPFVILL True PC9_epitope_Rep4 1075.63176920387 1075.6306699358602 99.155 2 -0.06678909564731896 0.019181219582021184 0.20704219178201025 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ATP2A2-IFT81|3|fusion', 'ATP2A1|p.S287Lfs*11|1|0.12|ENSG00000196296|chr16:28887646-28887647|-/G|frameshift_variant', 'ATP2A2-IFT81|2|fusion', 'nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1'] 47872 16194 IYIAGHPAF True PC9_epitope_Rep3 987.51780208079 987.51670993586 67.43 2 -0.06684525339191086 0.019199705563620748 0.20719183340999267 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 47590 7893 IVVPKAAIVAR True NCI_RA007_Epitope_Rep4 1135.7441136175098 1135.74247490379 37.093 3 -0.06691901104039781 0.019199705563620748 0.20738846425246543 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 73407 4551 [Acetylation]-M[Oxidation]TM[Oxidation]DKSELVQK True H1975_Epitope_Rep3 1382.64215391756 1382.64104993586 22.626 2 -0.06694237462078019 0.019199705563620748 0.2074507709475875 ['ENSG00000166913|ENST00000353703|YWHAB'] 39207 13065 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45884993586 55.26 2 -0.06694781844304065 0.019199705563620748 0.20746529018958806 ['ENSG00000132646|ENST00000379143|PCNA'] 108628 10748 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59198993586 46.23 2 -0.06694892848827923 0.019199705563620748 0.2074682508653649 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 141885 14129 YVDPVNKVL True PC9_epitope_Rep4 1045.58079626017 1045.5796899358602 62.251 2 -0.0670258304545923 0.019216223398818406 0.2076734183668942 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 37797 13393 GYEPPVQESV True PC9_epitope_Rep4 1103.51350454599 1103.5124099358602 59.418 2 -0.06704727366393669 0.019216223398818406 0.20773064699007035 ['ENSG00000145425|ENST00000274065|RPS3A'] 108765 18472 SYSMIVNNL True PC9_epitope_Rep6 1039.50083168731 1039.4997299358602 83.693 2 -0.06705391120712205 0.019216223398818406 0.20774836334450572 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 6459 13188 APSGNFVAC True PC9_epitope_Rep3 864.37998827864 864.37888993586 55.764 2 -0.06707104806008768 0.019216223398818406 0.20779410742286736 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 93200 5500 RPPPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 25.986 2 -0.06712115357903412 0.019216223398818406 0.20792788811890459 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 90685 14496 REQLLVTI True PC9_epitope_Rep4 970.5811306133398 970.58002993586 63.669 2 -0.06715624121980099 0.019216223398818406 0.2080215998236639 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1', 'ENST00000558070.1_1_15:31352716-31354937:-|nuORF'] 61273 23497 LIPEYLNFI True PC9_epitope_Rep5 1120.61684741572 1120.61627496793 95.362 1 -0.06716572548078437 0.019216223398818406 0.20804693430859691 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 136943 11252 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.38026993586 48.16 2 -0.06716853888455347 0.019216223398818406 0.20805444983936044 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 73187 11922 MRYNEKELQAL True PC9_epitope_Rep2 1393.70238502817 1393.7012899358601 51.181 2 -0.06718772416331972 0.019216223398818406 0.20810570406833007 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 14478 5075 DTFYRIHRRGP True H1975_Epitope_Rep2 1416.7374650972797 1416.7358249037902 24.603 3 -0.0672092363696177 0.019216223398818406 0.20816318309793086 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 106174 12633 STDPLDAGVDY True H1975_Epitope_Rep3 1151.4982484046698 1151.49714993586 53.798 2 -0.06723907283124929 0.01923470013490863 0.20824291848415494 ['ENSG00000139645|ENST00000267116|ANKRD52'] 96503 8133 SADETWDSA True NCI_RA007_Epitope_Rep5 980.37231961556 980.37177496793 37.967 1 -0.06723975820119728 0.01923470013490863 0.2082447502753641 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 108335 11216 SYLDKVQAL True H1975_Epitope_Rep2 1035.5600608155898 1035.5589699358602 48.183 2 -0.06724984781289976 0.01923470013490863 0.20827171785687248 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 39972 11351 HPLLGVSA True PC9_epitope_Rep3 792.4493881678001 792.44828993586 48.665 2 -0.06726394909726227 0.01923470013490863 0.2083094111045879 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 103054 7801 SPGADAELP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 34.99 2 -0.06733094181981591 0.01923470013490863 0.20848853669499282 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 90699 5105 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 24.716 3 -0.0673832996260718 0.019254353691439786 0.20862859067533682 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 99971 19895 SIPEGALVAV True PC9_epitope_Rep2 954.5385970950199 954.53750993586 81.921 2 -0.0673865668182506 0.019254353691439786 0.20863733194255438 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 67023 9864 LSPQAVNSIAK True PC9_epitope_Rep1 1126.6346227381798 1126.63352993586 42.801 2 -0.06744234304216762 0.019292078803237144 0.208786590673539 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 108825 15884 SYVPKVAGL True PC9_epitope_Rep1 932.5331177917599 932.53202993586 65.908 2 -0.06746897161524627 0.019292078803237144 0.2088578702910939 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 141203 6767 YSYPTGNHTY True H1975_Epitope_Rep2 1201.50400249145 1201.50290993586 30.945 2 -0.06747127286438204 0.019292078803237144 0.20886403092796288 ['nc|ENSG00000089159|P49023-2|PXN', 'nc|ENSG00000089159|P49023|PXN', 'nc|ENSG00000089159|P49023-3|PXN', 'ENSG00000089159|ENST00000637617|PXN'] 37040 9447 GVPENGYQTLY True H1975_Epitope_Rep3 1239.5771674317102 1239.57606993586 41.341 2 -0.06747956537910862 0.019292078803237144 0.20888623151806615 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 91522 18297 RIATLLQQV True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 75.584 2 -0.06750983339087338 0.019292078803237144 0.20896727562862508 ['ENSG00000183665|ENST00000328599|TRMT12'] 111426 14671 THSNTIVVSL True PC9_epitope_Rep3 1069.57677350889 1069.57566993586 61.568 2 -0.06758698845277974 0.019292078803237144 0.2091739407030512 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 38305 7421 HEFLHEVPAA True H1975_Epitope_Rep3 1148.56145779792 1148.55982490379 33.523 3 -0.06763040293782137 0.019292078803237144 0.20929027893636418 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 37796 14444 GYEPPVQESV True PC9_epitope_Rep3 1103.51350454599 1103.5124099358602 60.664 2 -0.06764378217460523 0.019292078803237144 0.20932613860731727 ['ENSG00000145425|ENST00000274065|RPS3A'] 17899 8452 EIAAEYGIK True NCI_RA007_Epitope_Rep2 992.5178616504398 992.51676993586 37.519 2 -0.06767101576660506 0.019307780320366133 0.20939914185502653 ['ENSG00000169989|ENST00000304337|TIGD4', 'TIGD4|p.K208Vfs*45|1|0.44|ENSG00000169989|chr4:152770382-152770383|TT/-|frameshift_variant'] 24606 18003 FAIPGSSFL True H1975_Epitope_Rep3 937.49091862661 937.49037496793 75.413 1 -0.06774357656624631 0.019307780320366133 0.20959371920956166 ['ENST00000467061.1_1_3:185214522-185216779:-|nuORF', 'ENST00000475480.5_1_3:185199046-185216749:-|nuORF', 'TMEM41A|p.P235Hfs*2|1|0.1|ENSG00000163900|chr3:185491618-185491628|GAGGGTTCCAG/-|frameshift_variant', 'ENSG00000163900|ENST00000421852|TMEM41A'] 41585 16148 IAAGIFNDL True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49618496793 71.215 1 -0.06774603051482907 0.019307780320366133 0.20960030140262467 ['ENSG00000136930|ENST00000259457|PSMB7'] 6144 12531 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 53.507 2 -0.06775336603024117 0.019307780320366133 0.20961997803552437 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 83669 9408 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43308993586 41.155 2 -0.06780750855666574 0.019307780320366133 0.20976524029138413 ['ENSG00000168143|ENST00000306858|FAM83B'] 111173 8390 THGPPVQL True PC9_epitope_Rep4 847.45520182423 847.45410993586 39.734 2 -0.06783137649563518 0.019307780320366133 0.20982929463030925 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 115881 4661 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 23.025 3 -0.06783494289469934 0.019307780320366133 0.20983886669295854 ['ENSG00000204560|ENST00000376442|DHX16'] 78357 12879 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 54.837 3 -0.06785353854357537 0.019307780320366133 0.2098887805144396 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 33600 19734 GLFPQLYR True PC9_epitope_Rep5 992.5443511817998 992.54324993586 80.953 2 -0.06788805855004064 0.019307780320366133 0.20998145529137952 ['nc|ENSG00000168658|Q502W6-2|VWA3B', 'nc|ENSG00000168658|Q502W6-8|VWA3B', 'ENST00000409460.5_1_2:98703705-98907168:+|nuORF', 'ENSG00000168658|ENST00000477737|VWA3B', 'nc|ENSG00000168658|Q502W6-6|VWA3B', 'VWA3B|p.D245Mfs*34|1|0.16|ENSG00000168658|chr2:98128265-98128265|G/-|frameshift_variant'] 65387 12762 LREERAYIL True PC9_epitope_Rep3 1161.6506071554898 1161.64897490379 54.108 3 -0.06792723323588723 0.019307780320366133 0.21008665361095208 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 41595 14699 IADEGTWTL True NCI_RA007_Epitope_Rep5 1004.48147614172 1004.48036993586 63.21 2 -0.06792725585052772 0.019307780320366133 0.21008671434788156 ['ENSG00000170584|ENST00000302764|NUDCD2'] 35653 15484 GTDPLVLAV True H1975_Epitope_Rep2 883.5014833103099 883.5009349679301 64.716 1 -0.06795045831710506 0.019307780320366133 0.2101490351107682 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1'] 5856 6122 APFPHGDSA True PC9_epitope_Rep5 897.3980808709299 897.39698993586 28.533 2 -0.06799187488704327 0.019327027192677794 0.21026030338708757 ['ENSG00000010017|ENST00000011619|RANBP9'] 109996 9042 TEILKSVVA True H1975_Epitope_Rep2 958.5698972232999 958.56880993586 39.733 2 -0.06799537428375213 0.019327027192677794 0.2102697062247435 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 6888 16490 AQIEDLQVKL True PC9_epitope_Rep6 1155.6499384491499 1155.6488499358602 75.853 2 -0.0680095294150922 0.019327027192677794 0.21030774325387994 ['ENSG00000157933|ENST00000378536|SKI'] 54123 15625 KVPEIEVTV True PC9_epitope_Rep2 1012.5804619069999 1012.57936993586 65.378 2 -0.06801151456502376 0.019342715333238017 0.21031307796139506 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 109254 14373 TASPTTTAAI True PC9_epitope_Rep4 932.48147614172 932.48036993586 63.193 2 -0.06802976816930946 0.019342715333238017 0.21036213448754365 ['ENST00000319070.2_1_16:681311-683059:+|nuORF'] 2808 5963 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 27.918 2 -0.068033548494254 0.019342715333238017 0.21037229488936038 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 125148 14934 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 62.683 1 -0.06804243102019895 0.019342715333238017 0.21039616956819912 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 40733 4521 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 22.752 3 -0.06805421277493759 0.019342715333238017 0.21042783916437108 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 44307 16732 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52547496793 69.595 1 -0.06805921182437841 0.019342715333238017 0.21044127750210398 ['ENSG00000138160|ENST00000260731|KIF11'] 23922 13510 EYLENALKL True NCI_RA007_Epitope_Rep1 1091.58627556343 1091.5851699358602 56.557 2 -0.068169741791297 0.019342715333238017 0.21073852218840394 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6', 'GBP6|p.L464Tfs*13|1|0.05|ENSG00000183347|chr1:89383674-89383681|TCCTGGAG/-|frameshift_variant'] 58381 14738 LENLTLMQL True PC9_epitope_Rep5 1073.57908200801 1073.5779899358602 61.689 2 -0.06817362312667742 0.019342715333238017 0.21074896432410284 ['ENST00000258301.5_1_1:180971785-180971830:-|nuORF'] 49282 8489 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5905899358602 37.638 2 -0.06822780361982177 0.019342715333238017 0.21089475823810735 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 89035 21750 QVLEELTEL True PC9_epitope_Rep5 1072.5652057656798 1072.5641099358602 88.69 2 -0.06824214356486032 0.019342715333238017 0.21093335475049488 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'GFPT2|p.R386W|1|0.28|ENSG00000131459|chr5:180316458-180316458|G/A|missense_variant', 'ENSG00000131459|ENST00000253778|GFPT2'] 63652 16260 LMQLLQESL True NCI_RA007_Epitope_Rep3 1073.5790820080101 1073.5779899358602 71.645 2 -0.0682511429195537 0.019342715333238017 0.2109575788365872 ['ENSG00000168209|ENST00000307365|DDIT4'] 44152 22280 IITDFDMTL True PC9_epitope_Rep2 1067.52089842555 1067.52037496793 91.177 1 -0.06827057526012947 0.019342715333238017 0.2110098911983493 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF', 'ENST00000461851.1_1_7:33061643-33066527:-|nuORF', 'ENST00000464840.5_1_7:33063600-33075596:-|nuORF'] 47016 9227 ITRARFEEL True PC9_epitope_Rep2 1133.61930702721 1133.61766490379 40.832 3 -0.06832831663367972 0.019361558728019118 0.21116537440277178 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA6|p.S298F|1|0.15|ENSG00000173110|chr1:161525551-161525551|C/T|missense_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 106373 22429 STIANVWLV True PC9_epitope_Rep3 1001.55458151233 1001.55348993586 91.55 2 -0.0683397582440579 0.019361558728019118 0.21119619127069242 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 94233 7250 RRQEAIYEM True PC9_epitope_Rep4 1194.5815416194998 1194.5798849037901 35.197 3 -0.0683620681092431 0.019361558728019118 0.21125628781154582 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000465087.1_1_10:5494419-5494892:+|nuORF'] 6505 9615 APTAEGLAA True PC9_epitope_Rep5 799.4075829254699 799.40703496793 41.948 1 -0.06838481509370753 0.019361558728019118 0.21131757146810215 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 128400 6552 VPRPETAVA True PC9_epitope_Rep5 938.5185303567798 938.51742993586 30.175 2 -0.06841678892188736 0.019377233282286882 0.2114037300222989 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 75906 10011 NLQTVNVDEN True PC9_epitope_Rep4 1144.53603089572 1144.5349299358602 46.17 2 -0.0684322204915852 0.019377233282286882 0.21144531971218464 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 14352 5420 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 25.92 2 -0.06847287245148703 0.019377233282286882 0.21155490240899505 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 81086 21573 PITMTDSWSL True PC9_epitope_Rep5 1149.53761111885 1149.53650993586 88.02 2 -0.06848675559787731 0.019377233282286882 0.21159233336660352 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000436990.2_1_22:23654089-23657706:+|nuORF'] 33115 7394 GIRQMRLFSQ True H1975_Epitope_Rep3 1234.6604606465398 1234.65936993586 33.419 2 -0.06850755552342556 0.019377233282286882 0.21164841973076942 ['nc|ENSG00000091542|Q6P6C2-3|ALKBH5', 'ENSG00000091542|ENST00000399138|ALKBH5', 'nc|ENSG00000091542|Q6P6C2-1|ALKBH5'] 110185 7987 TEQDVLRSRVK True NCI_RA007_Epitope_Rep1 1329.73646203777 1329.73480490379 35.06 3 -0.06850932012484166 0.019377233282286882 0.21165317829856437 ['ENSG00000114349|ENST00000232461|GNAT1'] 7891 10795 ATAGVVTSV True PC9_epitope_Rep5 803.43888305375 803.43778993586 46.513 2 -0.06852815062946291 0.019377233282286882 0.21170396181167242 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 78470 16386 NYNDFGNY True PC9_epitope_Rep1 1005.3828247296099 1005.38172993586 67.852 2 -0.06854075747991893 0.019377233282286882 0.2117379646300825 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 73130 9898 MRPRKAFLL True PC9_epitope_Rep2 1130.6746541587 1130.6730149037899 43.404 3 -0.06854389035588046 0.019377233282286882 0.2117464149919808 ['ENSG00000155660|ENST00000652332|PDIA4'] 139425 20483 YLPESSFIGA True PC9_epitope_Rep5 1082.52842633414 1082.52732993586 83.827 2 -0.06859294864814892 0.019377233282286882 0.21187876482704424 ['ENSG00000188352|ENST00000338382|FOCAD'] 118636 16992 TYSPALNKMF True PC9_epitope_Rep4 1170.5743309807401 1170.5732299358601 73.351 2 -0.06860434092163002 0.019377233282286882 0.21190950545217493 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 81803 16713 PLPPPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 76.761 2 -0.06862171897476349 0.019377233282286882 0.21195640264586788 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 44654 17812 ILSKDGVLYV True PC9_epitope_Rep3 1105.63831113629 1105.63720993586 73.711 2 -0.06864431206228513 0.01941489904660801 0.21201738183664734 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 33332 16361 GKPSPGLVNL True PC9_epitope_Rep4 980.5654805492 980.56438993586 70.895 2 -0.06864593214840388 0.01941489904660801 0.21202175484910263 ['ENST00000592904.5_1_19:9524750-9525065:-|nuORF'] 16235 5500 EEERNVPLA True H1975_Epitope_Rep2 1055.5247379360299 1055.52364993586 26.168 2 -0.06865112016146199 0.01941489904660801 0.21203575890858745 ['ENSG00000113328|ENST00000340828|CCNG1'] 100906 5015 SLEWSSER True NCI_RA007_Epitope_Rep5 992.45632402304 992.45522993586 25.993 2 -0.0686737697769528 0.01941489904660801 0.21209690317210994 ['ENSG00000135862|ENST00000258341|LAMC1'] 127724 12891 VPAPSPLSA True PC9_epitope_Rep2 837.45961849833 837.45852993586 54.882 2 -0.06868737370663495 0.01941489904660801 0.21213363258150725 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 58558 7410 LEQLREKP True H1975_Epitope_Rep3 1011.5712942056299 1011.57018993586 33.48 2 -0.0687025598019993 0.01941489904660801 0.21217463779730328 ['nc|ENSG00000162398|Q3ZCV2-2|CIMAP2', 'ENSG00000162398|ENST00000371273|LEXM'] 132350 6744 VVAAHLAGA True PC9_epitope_Rep1 807.46028720467 807.45918993586 30.746 2 -0.0687066025613343 0.01941489904660801 0.21218555471050185 ['ENSG00000160161|ENST00000291495|CILP2'] 139842 7397 YPNSGSVSA True PC9_epitope_Rep3 880.39266113732 880.39156993586 33.461 2 -0.06871065611969686 0.01941489904660801 0.2121965010925947 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 98237 6385 SEVATLTAAGK True NCI_RA007_Epitope_Rep2 1046.5607890915799 1046.5596899358602 29.444 2 -0.0687721134954699 0.01943293392394211 0.2123625006396238 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 95170 4424 RVHEVFRVGK True NCI_RA007_Epitope_Rep4 1225.7043740638499 1225.70272490379 23.379 3 -0.06884582099395387 0.01943293392394211 0.21256168171763917 ['ENST00000393094.6_1_11:107879697-107879871:+|nuORF'] 13834 11857 DQLLGDAVAV True H1975_Epitope_Rep2 999.5236753068699 999.52317496793 50.686 1 -0.06886158247326986 0.01943293392394211 0.21260428744419838 ['ENST00000471934.1_1_1:44435799-44436661:+|nuORF', 'ENST00000527567.1_1_1:44435799-44436540:+|nuORF', 'ENST00000490861.5_1_1:44435799-44436893:+|nuORF', 'nc|ENSG00000132768|Q9BQC3-2|DPH2', 'ENSG00000132768|ENST00000255108|DPH2'] 88768 11746 QTPQRLLEV True PC9_epitope_Rep6 1082.6084079903399 1082.60730993586 56.339 2 -0.06887903013459899 0.01943293392394211 0.2126514566052832 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 39487 4663 HLDQSQKSLY True H1975_Epitope_Rep2 1217.60405088589 1217.6023949037901 23.033 3 -0.06890237980635074 0.01943293392394211 0.21271459056504105 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 78491 8720 NYNNQSSNF True PC9_epitope_Rep5 1086.4366512076201 1086.43554993586 38.484 2 -0.0689392380513374 0.01943293392394211 0.21281427041086393 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 29400 12633 FVDPSQDHAL True PC9_epitope_Rep3 1127.52473793603 1127.52364993586 53.616 2 -0.06895452776190655 0.019452949581547255 0.21285562753024612 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 98238 14833 SEVEIAWPA True H1975_Epitope_Rep1 1000.4865615221598 1000.48597496793 62.284 1 -0.06900895885711761 0.01947057983141825 0.21300289361228608 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 102967 8021 SPFAEGTSA True PC9_epitope_Rep6 865.38176210045 865.3806699358599 40.329 2 -0.06901947431427331 0.01947057983141825 0.2130313500967996 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 29233 8409 FTVGEGIR True NCI_RA007_Epitope_Rep2 877.4657665079299 877.46466993586 37.35 2 -0.06907931842500983 0.01947057983141825 0.21319333703145396 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 5975 12809 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 54.281 2 -0.06911630046409245 0.01947057983141825 0.21329347401102158 ['ENSG00000183856|ENST00000361170|IQGAP3'] 70117 8311 LVPEQIGK True NCI_RA007_Epitope_Rep2 882.5174677276199 882.51636993586 36.967 2 -0.06912336709955293 0.01947057983141825 0.21331261138209165 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 140698 11165 YRYGREEML True PC9_epitope_Rep1 1215.57064258263 1215.56899490379 47.831 3 -0.06912504955262987 0.01947057983141825 0.213317167822002 ['ENSG00000146830|ENST00000678049|GIGYF1', 'nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF'] 137224 22734 YAYPYIIDF True PC9_epitope_Rep4 1163.5539128059897 1163.55280993586 95.664 2 -0.0691423596087693 0.01947057983141825 0.213364050195456 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 18343 12822 EITALAPS True PC9_epitope_Rep2 800.42798401688 800.42743496793 54.62 1 -0.06916503202282391 0.019485024075736556 0.21342546438254006 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 62153 16354 LLEKELESV True PC9_epitope_Rep1 1058.58594121026 1058.5848499358601 67.726 2 -0.06916636905740461 0.019485024075736556 0.21342908639134758 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF'] 2806 5677 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 26.835 2 -0.06917122955961966 0.019485024075736556 0.213442253707942 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 98288 18169 SEVNLFLVP True NCI_RA007_Epitope_Rep4 1016.5542471591599 1016.55314993586 78.626 2 -0.06923030531927897 0.019485024075736556 0.21360232780152588 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9'] 128580 15049 VPTNIIAA True PC9_epitope_Rep1 797.4647038787699 797.46360993586 62.703 2 -0.06925974288144997 0.019485024075736556 0.21368211732219403 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 136217 20481 WRSLPLLPV True PC9_epitope_Rep2 1079.64915060351 1079.6480499358602 84.21 2 -0.06928588796231196 0.019485024075736556 0.2137529962299409 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 53452 6433 KRFDDKYTL True PC9_epitope_Rep6 1184.6189726740397 1184.61733490379 33.371 3 -0.06928804792723803 0.019485024075736556 0.21375885243108889 ['ENSG00000118363|ENST00000263672|SPCS2'] 142446 19944 YYFEGIKQTF True PC9_epitope_Rep5 1294.6233893481397 1294.6217549037901 81.77 3 -0.06929959951451135 0.019485024075736556 0.21379017312800797 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 118244 14335 TYLEKAIKI True PC9_epitope_Rep1 1077.6433965167298 1077.6422899358602 59.964 2 -0.06931862840140383 0.019485024075736556 0.21384177301811907 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 40105 12474 HPWETVTTAA True PC9_epitope_Rep3 1111.52982331647 1111.5287299358602 53.007 2 -0.06932663334476301 0.019485024075736556 0.2138634817268531 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 118408 14685 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 61.623 2 -0.06935357416929783 0.019485024075736556 0.21393655166476636 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 17848 13790 EHVEAIKIGL True PC9_epitope_Rep2 1107.6288090817498 1107.6277099358601 58.328 2 -0.06935388256319305 0.019485024075736556 0.21393738818078992 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ZWINT|p.A199Qfs*76|1|0.22|ENSG00000122952|chr10:56358833-56358833|C/-|frameshift_variant', 'ENSG00000122952|ENST00000373944|ZWINT'] 59163 21618 LFAGFENFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 88.45 2 -0.06944692015384653 0.019485024075736556 0.21418983277155565 ['ENSG00000188269|ENST00000322301|OR7A5'] 41870 15230 IC[Carbamidomethyl]C[Carbamidomethyl]DILDVLDK True H1975_Epitope_Rep1 1362.6523241601196 1362.65122993586 63.847 2 -0.06945631166206645 0.019485024075736556 0.2142153242786733 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 132219 17700 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 73.28 2 -0.06946438463723605 0.019485024075736556 0.2142372381840807 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 108617 23616 SYPNVFLVF True PC9_epitope_Rep2 1084.5593325396 1084.55822993586 96.307 2 -0.06953649661030278 0.019523042085721865 0.2144330382551028 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 54881 17924 KYPHYFPVM True PC9_epitope_Rep3 1180.57393705792 1180.5722849037902 74.15 3 -0.06956548611341287 0.019523042085721865 0.21451177846282682 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 36812 23264 GVLENIFGV True PC9_epitope_Rep2 946.5123823471798 946.5118349679301 94.969 1 -0.06957148196587275 0.019523042085721865 0.2145280661233048 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 85325 10331 QESGSSVFY True H1975_Epitope_Rep2 1002.42944056886 1002.42834993586 44.748 2 -0.06960180264568122 0.019523042085721865 0.2146104421137262 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 125408 12090 VISQPDQTL True PC9_epitope_Rep6 999.5236753068699 999.52256993586 57.831 2 -0.0696162902294883 0.019523042085721865 0.21464980837894967 ['ENSG00000123505|ENST00000368885|AMD1', 'nc|ENSG00000123505|P17707-2|AMD1'] 81799 18544 PLPPPLPPP True PC9_epitope_Rep3 923.54803957991 923.54694993586 76.549 2 -0.06962591429830482 0.019523042085721865 0.21467596145437307 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 29798 15174 FVPQEMGVHTV True PC9_epitope_Rep1 1242.6066937381797 1242.60558993586 63.187 2 -0.06963262133162339 0.019523042085721865 0.21469418860361553 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 32218 8526 GEYGGWYKA True NCI_RA007_Epitope_Rep3 1029.45559574705 1029.45448993586 40.609 2 -0.06974271214502609 0.01954144908616188 0.2149934926635691 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 119682 10944 VAVGVIKAV True PC9_epitope_Rep6 854.5589386167799 854.55784993586 52.973 2 -0.06976030672089788 0.01954144908616188 0.21504134790973464 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 132358 6805 VVAAHLAGA True PC9_epitope_Rep3 807.46028720467 807.45918993586 31.192 2 -0.06978426264364214 0.01954144908616188 0.2151065145277161 ['ENSG00000160161|ENST00000291495|CILP2'] 90705 4435 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 22.171 2 -0.069820485398573 0.01954144908616188 0.2152050704729463 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 39727 8246 HLVDEPQNLIK True NCI_RA007_Epitope_Rep5 1304.7088503076 1304.7077499358602 38.397 2 -0.06982342715961701 0.01954144908616188 0.21521307557159117 ['CON__P02769'] 14738 9829 DVNAAIATIK True NCI_RA007_Epitope_Rep1 1014.57095985246 1014.5703749679301 42.236 1 -0.06984275336329966 0.01956104923917921 0.21526566988428225 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000167553|ENST00000301072|TUBA1C'] 77993 20846 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.5594749679301 85.63 1 -0.06984593984929077 0.01956104923917921 0.2152743422490828 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 64233 15654 LPGVDALSNI True H1975_Epitope_Rep3 997.5444107514501 997.54330993586 65.631 2 -0.06992753763412117 0.019581047178085544 0.21549648349765477 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 114147 11124 TPIVGQPSIPG True H1975_Epitope_Rep1 1064.5866099165999 1064.58607496793 47.753 1 -0.06993941324080738 0.019600644516510637 0.21552882384761793 ['CON__P12763'] 78443 17727 NYLSTMKNF True PC9_epitope_Rep3 1116.52738078832 1116.5262899358602 73.383 2 -0.06996113637294217 0.019600644516510637 0.2155879883140085 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 20309 19488 ENTLQLVRNI True PC9_epitope_Rep2 1198.6669854956199 1198.6658899358602 80.342 2 -0.06997147044711216 0.019635029054949536 0.2156161369524426 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 4295 9012 AIIEEERLK True H1975_Epitope_Rep1 1099.62372370131 1099.62262993586 39.569 2 -0.06999429636986775 0.019635029054949536 0.21567831872311297 ['ENSG00000138587|ENST00000260453|MNS1'] 127850 20982 VPFPTPLEA True PC9_epitope_Rep1 969.5171333744498 969.51602993586 85.534 2 -0.07001625454242022 0.019635029054949536 0.21573814569014496 ['ENSG00000196976|ENST00000357360|LAGE3'] 66142 3996 LSENEQNTIEK True NCI_RA007_Epitope_Rep2 1303.62557417611 1303.6244699358601 20.181 2 -0.07004670083988758 0.019635029054949536 0.21582111405613677 ['ENSG00000023516|ENST00000025301|AKAP11'] 109089 17693 TALLKIEGV True PC9_epitope_Rep1 942.57498260374 942.57388993586 72.852 2 -0.07005739075941725 0.019635029054949536 0.21585024892779653 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 105095 5356 SREEGSPQL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 25.615 2 -0.07006717790079185 0.019635029054949536 0.2158769251731813 ['ENSG00000120278|ENST00000696526|PLEKHG1', 'PLEKHG1|p.S567Ffs*10|1|0.2|ENSG00000120278|chr6:150830811-150830815|CCTCC/-|frameshift_variant'] 118577 22123 TYQVLAVTF True PC9_epitope_Rep1 1040.5542471591598 1040.55367496793 89.908 1 -0.07009930527751196 0.019635029054949536 0.21596450535491463 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 55794 9974 LANLSFAD True H1975_Epitope_Rep3 849.42323298961 849.4226849679301 43.4 1 -0.07010973481072909 0.019635029054949536 0.21599294067412575 ['ENSG00000280204|ENST00000641544|OR1S1', 'nc|ENSG00000280204|Q8NH92|OR1S1'] 108967 10054 TAETVEEFCR True H1975_Epitope_Rep3 1183.51793830343 1183.5168499358601 43.709 2 -0.07018023572935318 0.019635029054949536 0.21618520871490993 ['ENSG00000103381|ENST00000381774|CPPED1'] 133731 18472 VYDPTTNAW True PC9_epitope_Rep5 1065.4767251144501 1065.47562993586 76.074 2 -0.07018862546978137 0.019635029054949536 0.21620809508248448 ['nc|ENSG00000109466|O95198-3|KLHL2', 'ENSG00000109466|ENST00000226725|KLHL2', 'nc|ENSG00000109466|O95198-2|KLHL2'] 103542 4702 SPRTDPYSA True PC9_epitope_Rep3 992.4563240230399 992.45522993586 23.179 2 -0.07025430187696574 0.019635029054949536 0.21638729861746908 ['ENSG00000043355|ENST00000376335|ZIC2'] 47388 16319 IVIRGLNTI True PC9_epitope_Rep4 997.62841515893 997.62730993586 70.733 2 -0.0702912990216848 0.019635029054949536 0.21648828345477178 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 54121 16284 KVPEIEVTV True PC9_epitope_Rep1 1012.5804619069999 1012.57936993586 67.454 2 -0.07032198828509015 0.019635029054949536 0.21657206989684522 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 129049 11103 VQNKVVVI True NCI_RA007_Epitope_Rep4 897.5647522732098 897.56364993586 49.584 2 -0.07032820731854562 0.019635029054949536 0.216589050937917 ['ENSG00000184544|ENST00000571134|DHRS7C', 'nc|ENSG00000184544|A6NNS2|DHRS7C'] 78409 20760 NYLPFIMEL True NCI_RA007_Epitope_Rep3 1138.57326835158 1138.57216993586 90.415 2 -0.07033612600536808 0.019635029054949536 0.2166106739065354 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 77475 18089 NTANSLLSV True PC9_epitope_Rep5 917.48181049489 917.48070993586 74.592 2 -0.07038500284900953 0.019635029054949536 0.2167441638530403 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 87736 6817 QRAPGQQVL True PC9_epitope_Rep1 995.5512274673898 995.55012993586 31.028 2 -0.07043350348455224 0.0196526135529642 0.21687666983674897 ['ENSG00000140987|ENST00000396852|ZSCAN32'] 95830 5435 RYIRDAHTF True NCI_RA007_Epitope_Rep2 1177.59924028897 1177.5976049037902 25.76 3 -0.07043601711653168 0.0196526135529642 0.21688353837692592 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 120191 9224 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48528496793 40.434 1 -0.07045109550508954 0.0196526135529642 0.21692474276108836 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 76323 12096 NPSSVIHVV True PC9_epitope_Rep5 950.51853035678 950.51742993586 51.522 2 -0.07046794678897829 0.0196526135529642 0.21697079685198042 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP', 'HINFP|p.Q469L|1|0.54|ENSG00000172273|chr11:119134350-119134350|A/T|missense_variant'] 22857 11812 EVCRRSAFPKA True H1975_Epitope_Rep1 1262.6553752661 1262.6542699358602 50.429 2 -0.07050528826841229 0.0196526135529642 0.21707286870672135 ['ENSG00000249156|ENST00000503184|TAF11L12', 'ENSG00000284373|ENST00000639081|TAF11L2', 'ENSG00000283740|ENST00000510838|TAF11L11'] 54976 9170 KYQEVTNNL True PC9_epitope_Rep5 1107.5560380643099 1107.55547496793 40.219 1 -0.07053888982244495 0.0196526135529642 0.21716473952049464 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 133438 9945 VVWQRRHAR True PC9_epitope_Rep3 1206.68464167878 1206.6829949037901 43.207 3 -0.07054014227056028 0.0196526135529642 0.21716816427050237 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 138400 6487 YHGNTNPEL True PC9_epitope_Rep3 1043.46722305991 1043.4661299358602 29.978 2 -0.07054293869315123 0.0196725990255438 0.21717581103735856 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 114536 16087 TQAPPNVVL True PC9_epitope_Rep1 937.5232813840499 937.52218993586 66.693 2 -0.07064724944723702 0.019712969380682514 0.21746114963754873 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 81783 18859 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 77.325 2 -0.07065180124740897 0.019732148317263592 0.21747360549029887 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 118397 14671 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 61.254 2 -0.07068688079003746 0.019732148317263592 0.21756961228709235 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 130544 8460 VSREAVAL True PC9_epitope_Rep4 843.4814165720699 843.48030993586 40.007 2 -0.07069936199832855 0.019732148317263592 0.21760377670346226 ['ENSG00000091536|ENST00000647165|MYO15A'] 8716 10700 AVARGLPGV True PC9_epitope_Rep5 838.5024863698198 838.50138993586 46.147 2 -0.07072905965946721 0.019745287824758023 0.21768507867366432 ['ENST00000373087.6_1_1:37940193-37941091:+|nuORF'] 71398 20262 LYSPLAEQF True PC9_epitope_Rep4 1066.5335117145798 1066.5324099358602 86.081 2 -0.07077136989193054 0.019745287824758023 0.2178009374894786 ['ENSG00000103148|ENST00000611875|NPRL3'] 117254 21116 TVLTQEAIITV True PC9_epitope_Rep5 1186.6809042242598 1186.67980993586 86.287 2 -0.07078327999993114 0.019745287824758023 0.21783355706337515 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 73661 24599 MYIIPVVLF True PC9_epitope_Rep5 1093.6245756484498 1093.6234699358602 99.738 2 -0.07079356973833666 0.019745287824758023 0.21786174084174426 ['ENSG00000161671|ENST00000334976|EMC10'] 29800 22524 FVPQFISQL True PC9_epitope_Rep1 1077.5858816406098 1077.58478993586 91.44 2 -0.07082624626748135 0.019745287824758023 0.21795125532128792 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 30145 23809 FYPALADLF True PC9_epitope_Rep5 1055.5327834385898 1055.5316899358602 96.562 2 -0.07091723068430948 0.019745287824758023 0.2182006022943976 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 28468 12854 FSDPVYAEAY True H1975_Epitope_Rep1 1160.5026055091198 1160.5015099358602 54.512 2 -0.07092314945250884 0.019745287824758023 0.21821682820676314 ['ENSG00000129083|ENST00000439561|COPB1'] 105626 16686 SSDSTFLVL True NCI_RA007_Epitope_Rep5 967.4862271689899 967.4856749679301 70.949 1 -0.0709291390052014 0.019745287824758023 0.2182332488235635 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 8929 12032 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6971299358602 54.084 2 -0.07095372179836042 0.019745287824758023 0.21830065049442765 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34635 17032 GPYKIILTA True PC9_epitope_Rep1 974.5800679841799 974.57896993586 70.337 2 -0.07098273232901509 0.019745287824758023 0.21838020647677497 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF', 'GANAB|p.P155L|1|0.17|ENSG00000089597|chr11:62634917-62634917|G/A|missense_variant'] 55349 6990 LAELEKRLKET True NCI_RA007_Epitope_Rep1 1328.7663651837197 1328.76472490379 31.189 3 -0.07098657412981485 0.019745287824758023 0.21839074305622097 ['nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN', 'ENST00000562715.1_1_16:14670117-14678644:-|nuORF'] 98547 21178 SFPLDIGSV True PC9_epitope_Rep2 933.48074786573 933.47964993586 86.917 2 -0.07102201048897813 0.019745287824758023 0.21848794407747804 ['ENSG00000130052|ENST00000374599|STARD8', 'STARD8|p.A398Hfs*61|1|0.27|ENSG00000130052|chrX:68718345-68718345|G/-|frameshift_variant', 'STARD8|p.E40Kfs*44|1|0.58|ENSG00000130052|chrX:68717271-68717271|G/-|frameshift_variant'] 6 5158 AAAAAAAAAAA True PC9_epitope_Rep4 799.41881631551 799.41770993586 26.526 2 -0.07105063915616289 0.019745287824758023 0.21856648855943003 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 37420 17195 GVTEVLHGL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 71.399 2 -0.07105590947018456 0.019745287824758023 0.21858094961964286 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion'] 62465 16900 LLIDDKGTIKL True PC9_epitope_Rep4 1227.74383883399 1227.74218490379 72.99 3 -0.07107366121585632 0.019745287824758023 0.21862966185279892 ['ENSG00000170312|ENST00000395284|CDK1'] 2875 16628 AEVISLFSA True H1975_Epitope_Rep3 935.49639792987 935.49530993586 69.467 2 -0.07113254770829303 0.019745287824758023 0.2187912924443143 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 87848 12624 QRGPPIIL True PC9_epitope_Rep6 892.5494365622399 892.54832993586 60.02 2 -0.07113260104078735 0.019745287824758023 0.21879143885912844 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 72721 11047 MNFKTPRGPV True PC9_epitope_Rep3 1145.60154878809 1145.59990490379 47.486 3 -0.07117216323992066 0.019745287824758023 0.2189000641163297 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561157.5_1_15:83205554-83205662:-|nuORF', 'ENST00000558397.1_1_15:83205554-83206687:-|nuORF'] 17569 9794 EHGPNPIL True PC9_epitope_Rep5 875.45011644379 875.44900993586 42.642 2 -0.07118622723749349 0.019764053872328286 0.2189386862863344 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 109044 10907 TAIRGAIIL True H1975_Epitope_Rep2 926.5913013742199 926.59020993586 46.985 2 -0.07118721690151296 0.019764053872328286 0.21894140421101144 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000438210.1_1_1:40428398-40429073:+|nuORF', 'ENST00000479476.1_1_18:68097766-68098228:+|nuORF', 'ENST00000527871.5_1_16:2012676-2013018:-|nuORF', 'ENST00000533161.5_1_16:2012676-2014626:-|nuORF'] 33500 5692 GLDEGALR True NCI_RA007_Epitope_Rep1 829.4293809992099 829.42828993586 26.2 2 -0.0712385479739264 0.019764053872328286 0.2190823998016775 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000482444.5_2_22:31477435-31483924:+|nuORF', 'ENST00000497697.5_1_22:31477435-31484100:+|nuORF', 'ENST00000475548.5_1_22:31477435-31484563:+|nuORF'] 22330 10841 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.49727496793 46.781 1 -0.07125728774625367 0.019764053872328286 0.21913388597901634 ['ENSG00000150787|ENST00000280362|PTS'] 121137 17619 VERSFLTL True PC9_epitope_Rep5 963.5389314481899 963.53782993586 72.781 2 -0.07127021192873778 0.019775967413441956 0.21916939797667234 ['ENST00000322893.11_1_14:63447681-63447711:-|nuORF'] 62104 7583 LLEDKHFQSY True H1975_Epitope_Rep3 1278.6244519773 1278.62334993586 34.149 2 -0.07130648038345284 0.019775967413441956 0.2192690697122089 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 18309 19618 EISAHLSALVL True PC9_epitope_Rep4 1151.65502382959 1151.65392993586 83.577 2 -0.07131969582967587 0.019775967413441956 0.2193053939189388 ['ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 86141 16559 QIDGTLSTI True PC9_epitope_Rep4 946.49712620586 946.4965749679301 71.669 1 -0.07134459796975622 0.019775967413441956 0.2193738490344811 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 109518 7504 TDPVDIYK True H1975_Epitope_Rep3 949.47566248529 949.47456993586 33.845 2 -0.071360914108779 0.019775967413441956 0.21941870766497257 ['ENSG00000140575|ENST00000268182|IQGAP1'] 38802 7880 HGVSLGSSL True NCI_RA007_Epitope_Rep4 855.4450310633501 855.44392993586 37.034 2 -0.07138095122050786 0.019775967413441956 0.21947380315930257 ['ENSG00000140396|ENST00000452400|NCOA2'] 38899 16084 HHFEQMLKL True PC9_epitope_Rep1 1181.6015487880898 1181.59990490379 66.681 3 -0.07140301617514687 0.019775967413441956 0.21953448302505074 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 26361 8985 FHSNDGGNVL True PC9_epitope_Rep5 1058.47812209678 1058.4770299358602 39.504 2 -0.07142628360868657 0.019775967413441956 0.2195984793872112 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 139802 11908 YPIEHGIITN True PC9_epitope_Rep5 1155.5924235730297 1155.5913299358601 50.802 2 -0.0714278735828767 0.019775967413441956 0.21960285292254125 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 106 18629 AAASHFFNL True PC9_epitope_Rep5 976.4766655448 976.47556993586 76.682 2 -0.0714463517718895 0.019775967413441956 0.21965368417757114 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-4|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-3|KLHL7'] 85228 5812 QEQEERLRKQE True H1975_Epitope_Rep3 1471.7379185897496 1471.73626490379 27.378 3 -0.07149373095596503 0.019775967413441956 0.2197840469794488 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 118429 21109 TYPEGLEVLHF True PC9_epitope_Rep2 1303.64485306871 1303.6437499358601 86.654 2 -0.07157379433569647 0.019775967413441956 0.22000443251651894 ['ENSG00000151849|ENST00000381884|CENPJ'] 47822 13714 IYGYVAEQF True NCI_RA007_Epitope_Rep3 1088.5178616504397 1088.51727496793 61.265 1 -0.07161427898445684 0.019775967413441956 0.22011591651231116 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 141336 18395 YTDTGLWGLY True H1975_Epitope_Rep2 1187.5498900547097 1187.5487899358602 76.307 2 -0.07161742603337348 0.019775967413441956 0.22012458389968279 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF', 'ENST00000444457.5_1_7:102938385-102969496:+|nuORF', 'ENSG00000105819|ENST00000249269|PMPCB', 'ENST00000443722.5_1_7:102939135-102952660:+|nuORF'] 42429 7842 IEDSEPHIP True H1975_Epitope_Rep1 1035.48728979815 1035.48618993586 35.114 2 -0.07162021058517476 0.019775967413441956 0.22013225307238976 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 100093 18745 SISDVIAQV True PC9_epitope_Rep6 930.5022115863 930.50110993586 84.742 2 -0.07163471402383996 0.019775967413441956 0.22017220051477154 ['ENSG00000154122|ENST00000284268|ANKH'] 1314 4350 AEDRSLQAEP True H1975_Epitope_Rep3 1114.5254662120199 1114.52436993586 21.849 2 -0.07163852646735382 0.019775967413441956 0.22018270192595601 ['ENSG00000111816|ENST00000606080|FRK'] 103315 8541 SPLSTPTSA True PC9_epitope_Rep4 859.42871229287 859.42760993586 40.332 2 -0.07167313728289881 0.019775967413441956 0.22027804982527618 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'CD320|p.A240Qfs*29|1|0.16|ENSG00000167775|chr19:8302594-8302594|C/-|frameshift_variant', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 104532 10531 SQPEKVYTL True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 45.495 2 -0.07167404075145263 0.019775967413441956 0.22028053904484463 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 35088 8004 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 35.608 2 -0.07168739137764615 0.019775967413441956 0.22031732416788402 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 88844 5463 QVASTLKQV True PC9_epitope_Rep6 972.5603951687598 972.55928993586 28.952 2 -0.07169583826959644 0.019775967413441956 0.22034059965209615 ['ENSG00000166295|ENST00000299381|ANAPC16'] 24668 11917 FALNNPEM True NCI_RA007_Epitope_Rep3 934.42185309062 934.42074993586 54.007 2 -0.07180200199676079 0.01979230299328039 0.22063324520056377 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1'] 5277 5506 ALQASALK True PC9_epitope_Rep3 800.47560291564 800.4745099358599 26.254 2 -0.07181616525871187 0.01979230299328039 0.22067230239650176 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 177 6264 AAEAVAAAV True NCI_RA007_Epitope_Rep4 771.4126683059098 771.41211496793 30.698 1 -0.07187027565139746 0.01979230299328039 0.2208215529537441 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant', 'MAP1B|p.K790N|1|0.65|ENSG00000131711|chr5:72195725-72195725|G/T|missense_variant', 'MAP1B|p.G800C|1|0.17|ENSG00000131711|chr5:72195753-72195753|G/T|missense_variant'] 9999 20632 AYPYNFSNL True PC9_epitope_Rep2 1087.49746055903 1087.49636993586 84.795 2 -0.07192337073076621 0.01979230299328039 0.2209680546108832 ['ENSG00000174282|ENST00000380599|ZBTB4'] 4120 12989 AHSNLASVL True PC9_epitope_Rep3 910.4872302285 910.48612993586 54.989 2 -0.0719349644932136 0.01979230299328039 0.2210000512900563 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 106758 6669 STYRDFQQA True PC9_epitope_Rep4 1114.50433684462 1114.5032299358602 32.827 2 -0.07193944595471186 0.01979230299328039 0.22101241996263007 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.S39G|1|0.41|ENSG00000125676|chrX:123712865-123712865|T/C|missense_variant'] 46150 16599 ISLGEGHLSV True PC9_epitope_Rep5 1010.5396597241801 1010.53856993586 68.853 2 -0.0719449137763072 0.01979230299328039 0.22102751144634958 ['ENSG00000124942|ENST00000378024|AHNAK'] 38822 14266 HHALPITDL True PC9_epitope_Rep5 1015.54507945779 1015.5439899358599 59.878 2 -0.07196678764096044 0.01979230299328039 0.2210878899138838 ['ENSG00000065268|ENST00000585809|WDR18'] 142234 18757 YWMHVQNTF True PC9_epitope_Rep2 1224.53861417836 1224.53750993586 77.524 2 -0.07201814103411487 0.01979230299328039 0.22122967482336733 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 24698 20456 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.54184993586 85.518 2 -0.07205977945084663 0.01979230299328039 0.2213446720668342 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 45811 7893 ISDECKRRFYK True NCI_RA007_Epitope_Rep1 1443.7292684823499 1443.72763490379 34.694 3 -0.07207287140347116 0.01981064847806169 0.2213808359865406 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000484615.5_1_22:39713464-39715605:-|nuORF', 'ENST00000460589.5_1_22:39713464-39715412:-|nuORF', 'ENST00000465618.5_1_22:39712851-39715803:-|nuORF', 'ENST00000467870.1_1_14:57445264-57445663:+|nuORF'] 115213 8886 TRDSNIIRL True PC9_epitope_Rep4 1086.61455599994 1086.6134499358602 41.712 2 -0.07211965750891568 0.01981064847806169 0.22151009864630858 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS'] 64052 13595 LPAPPAVSA True PC9_epitope_Rep4 821.46470387877 821.46360993586 60.186 2 -0.07216377910219801 0.01981064847806169 0.22163203593343508 ['ENSG00000010017|ENST00000011619|RANBP9'] 4591 6267 AKQLTTTI True NCI_RA007_Epitope_Rep5 874.51238234718 874.51128993586 30.785 2 -0.07217838856779685 0.01981064847806169 0.22167241934958523 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 75899 7692 NLQTVNVDEN True NCI_RA007_Epitope_Rep5 1144.53603089572 1144.53547496793 36.291 1 -0.0722107143910051 0.01981064847806169 0.22176178794217588 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 17429 12355 EHDSQIVQI True PC9_epitope_Rep1 1067.5247379360299 1067.52364993586 52.38 2 -0.07221754925978115 0.019828586551576717 0.22178068616892122 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1', 'RC3H1|p.M449*|1|0.14|ENSG00000135870|chr1:173965110-173965110|T/-|frameshift_variant'] 58551 10926 LEQLFQDEVAK True NCI_RA007_Epitope_Rep2 1318.67688147298 1318.6757899358602 47.108 2 -0.07225904711561079 0.019828586551576717 0.22189544472122708 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 112980 18868 TLLRLLYEA True PC9_epitope_Rep6 1090.6386454894598 1090.63754993586 85.224 2 -0.07225944043461455 0.019828586551576717 0.22189653255793498 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 84611 20076 QDCSLYLLF True PC9_epitope_Rep5 1100.52123277872 1100.52012993586 82.275 2 -0.07227389109636537 0.019828586551576717 0.2219365019504562 ['ENST00000552189.5_1_12:48437042-48437348:-|nuORF'] 31779 14338 GEIASGFWQA True NCI_RA007_Epitope_Rep3 1064.49270953176 1064.4916099358602 63.714 2 -0.07227790641982387 0.019828586551576717 0.22194760868801422 ['ENSG00000145685|ENST00000380345|LHFPL2'] 88007 11470 QRNPQGFVL True PC9_epitope_Rep6 1057.5668775315298 1057.56578993586 55.187 2 -0.07228584769206359 0.019828586551576717 0.22196957580159682 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 17621 6060 EHINSVSAM True PC9_epitope_Rep6 986.44913046762 986.44802993586 31.684 2 -0.07232841075453202 0.019847732269359174 0.22208733295498395 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 69818 17629 LVGPVLGAA True PC9_epitope_Rep1 795.4854393233499 795.48489496793 72.602 1 -0.07233616984775007 0.019847732269359174 0.22210880318183415 ['nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 125046 6596 VIDPGFAK True NCI_RA007_Epitope_Rep3 845.46470387877 845.46360993586 33.004 2 -0.07237791105622472 0.019847732269359174 0.22222432412223564 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 6010 8395 APITGQVSA True PC9_epitope_Rep4 842.4497820906199 842.44868993586 39.753 2 -0.07241862739578438 0.01986728005536783 0.222337038941935 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 103390 17041 SPPPEWDSV True PC9_epitope_Rep2 1012.45017601344 1012.44906993586 70.799 2 -0.07243748081325897 0.01986728005536783 0.22238924087158077 ['ENSG00000075568|ENST00000186436|TMEM131'] 44542 20838 ILMQGMNILI True PC9_epitope_Rep5 1144.63482306232 1144.6337299358602 85.202 2 -0.07250868860214352 0.019907181240840253 0.22258646095818063 ['DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant'] 48362 12611 IYTFPHSAF True NCI_RA007_Epitope_Rep4 1081.5232813840498 1081.52218993586 55.534 2 -0.072517153909853 0.019907181240840253 0.22260991290079632 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 27713 2664 FPPKPKDT True NCI_RA007_Epitope_Rep5 928.50181766348 928.50072993586 14.936 2 -0.07262921050787541 0.019924697262643738 0.22292047138342072 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3', 'CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 96484 7632 SAASASAAL True PC9_epitope_Rep5 747.37628279719 747.37573496793 34.303 1 -0.07263338179073167 0.019924697262643738 0.2229320362145676 ['ENSG00000124766|ENST00000244745|SOX4'] 111202 12946 THISDTSVVL True PC9_epitope_Rep2 1070.56078909158 1070.56027496793 55.09 1 -0.07263756093337984 0.019924697262643738 0.22294362315044686 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 127411 6985 VNESVYNAT True H1975_Epitope_Rep2 995.4559896698701 995.45488993586 31.791 2 -0.07267201041875875 0.019924697262643738 0.223039148470323 ['PCDH7|p.S844Y|1|0.3|ENSG00000169851|chr4:30723953-30723953|C/A|missense_variant'] 131965 15662 VTSAYQVP True PC9_epitope_Rep1 863.4388830537499 863.43778993586 65.064 2 -0.07271023756313855 0.019924697262643738 0.22314517384882598 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 106376 22454 STIANVWLV True PC9_epitope_Rep5 1001.55458151233 1001.5540749679301 91.37 1 -0.07271871003853113 0.019924697262643738 0.22316867634202195 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 45045 10222 IPGTGFTVDA True PC9_epitope_Rep3 976.4865615221598 976.48546993586 44.269 2 -0.07272844083424303 0.019924697262643738 0.223195670982896 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 35596 16460 GTASGFYTV True PC9_epitope_Rep1 901.4181476091701 901.4175949679301 68.138 1 -0.07278359200518109 0.01996377622662244 0.2233487004519259 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 39211 10677 HIGDAVVI True PC9_epitope_Rep6 822.4599528515 822.45884993586 51.885 2 -0.07282225403716351 0.01996377622662244 0.22345600958687772 ['ENSG00000132646|ENST00000379143|PCNA'] 16375 9507 EEIQGLTTA True NCI_RA007_Epitope_Rep5 960.47639076128 960.47528993586 43.202 2 -0.07284011436435693 0.01996377622662244 0.22350559120706037 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 85376 11076 QEVAVKEQLT True NCI_RA007_Epitope_Rep2 1143.6135529404298 1143.61244993586 47.672 2 -0.07284261504051245 0.01996377622662244 0.2235125337297387 ['ENSG00000197892|ENST00000524189|KIF13B'] 72049 18318 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.55197496793 76.767 1 -0.07288104442736146 0.019980467160413445 0.22361923772558495 ['ENSG00000198712|ENST00000361739|MT-CO2'] 90518 6687 RELSEITTA True NCI_RA007_Epitope_Rep4 1018.5294889633 1018.52838993586 32.346 2 -0.07288293258428287 0.019980467160413445 0.22362448111135474 ['nc|ENSG00000165699|Q92574-2|TSC1', 'ENSG00000165699|ENST00000298552|TSC1'] 77977 16873 NVPDSFNEV True PC9_epitope_Rep1 1019.45598966987 1019.45488993586 69.726 2 -0.07293477771735313 0.019980467160413445 0.22376847928329194 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 107662 9414 SVQQLRCTEAK True NCI_RA007_Epitope_Rep1 1261.64487015205 1261.64376993586 40.612 2 -0.07294527733782727 0.019980467160413445 0.22379764749932435 ['nc|ENSG00000151422|P16591-2|FER', 'ENSG00000151422|ENST00000281092|FER'] 134492 11000 VYPTKTFPNL True NCI_RA007_Epitope_Rep5 1178.6335601090198 1178.6324699358602 48.946 2 -0.07299081365028184 0.019980467160413445 0.2239241713863756 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 17323 8631 EHANDYAEI True PC9_epitope_Rep2 1060.44615326216 1060.4450499358602 38.566 2 -0.07301055474551695 0.019980467160413445 0.2239790340887604 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 63677 23240 LMSLIINTF True PC9_epitope_Rep5 1050.57835373202 1050.57777496793 94.376 1 -0.07302270535556292 0.019980467160413445 0.22401280545358665 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 62775 19050 LLLRNLTVQ True PC9_epitope_Rep2 1068.6655289436399 1068.6644299358602 78.64 2 -0.07306600018671613 0.019980467160413445 0.2241331604279991 ['ENSG00000126773|ENST00000406854|PCNX4'] 44973 18080 IPALDNFLDKL True H1975_Epitope_Rep3 1257.69688864157 1257.6957899358601 75.742 2 -0.07307636453351612 0.019980467160413445 0.22416197716930022 ['ENSG00000167658|ENST00000309311|EEF2'] 27921 8470 FQEENTEKL True PC9_epitope_Rep3 1136.5349682665599 1136.5338699358601 37.541 2 -0.07318818821576537 0.020038245585482953 0.22447301069106196 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 12051 10458 DHSQGLEL True PC9_epitope_Rep4 897.4192102383299 897.41810993586 47.937 2 -0.07318935329300534 0.020038245585482953 0.22447625248668637 ['ENST00000461942.5_1_9:116079031-116083765:-|nuORF', 'nc|ENSG00000148225|Q8NA23-2|WDR31', 'ENSG00000148225|ENST00000374193|WDR31'] 5737 19428 APAPVFFVT True PC9_epitope_Rep6 947.5116540711899 947.51054993586 87.391 2 -0.07319775968093202 0.020038245585482953 0.22449964374980247 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'ABCC3|p.E507Sfs*5|1|0.28|ENSG00000108846|chr17:50667639-50667639|G/-|frameshift_variant', 'nc|ENSG00000108846|O15438-3|ABCC3'] 4041 14844 AHGVSLVL True PC9_epitope_Rep1 794.46503823194 794.46394993586 61.917 2 -0.07320874154893667 0.020038245585482953 0.22453020333613033 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 79145 10157 PALRGALL True H1975_Epitope_Rep2 809.5123227775299 809.51122993586 44.069 2 -0.07321422844071294 0.020038245585482953 0.22454547268721017 ['ENST00000262738.7_1_22:46932303-46932903:-|nuORF'] 98108 13826 SESDYIVMP True H1975_Epitope_Rep3 1039.4532127885498 1039.45210993586 58.487 2 -0.07324452025329946 0.020038245585482953 0.22462978077915197 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|4|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1', 'NCOR2-SCARB1|11|fusion', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'SCARB1|p.G379*|1|0.3|ENSG00000073060|chr12:124795254-124795263|GGGGATTCCC/-|frameshift_variant'] 85997 10406 QHLQAAGQVL True PC9_epitope_Rep5 1063.57744221523 1063.5763499358602 45.012 2 -0.07325693995452118 0.020038245585482953 0.22466435199019963 ['ENSG00000155561|ENST00000285968|NUP205'] 105147 14626 SRFPEALRL True PC9_epitope_Rep2 1087.61382772395 1087.6127299358602 61.526 2 -0.0732645767291172 0.020038245585482953 0.22468561091636427 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 90246 4516 REEEKMIPP True H1975_Epitope_Rep2 1127.5644945730298 1127.56285490379 22.484 3 -0.07330227195755265 0.02005818093048803 0.22479056051528504 ['nc|ENSG00000064607|Q8IX01-4|SUGP2', 'nc|ENSG00000064607|Q8IX01-3|SUGP2', 'ENSG00000064607|ENST00000452918|SUGP2', 'ENST00000598240.1_1_19:19105804-19136912:-|nuORF'] 71784 5142 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 24.882 2 -0.07337850905388982 0.020077707032283 0.2250028942999763 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 20328 21625 ENVLAIISL True PC9_epitope_Rep3 970.5698972233 970.5693449679301 88.479 1 -0.07338681169623314 0.020077707032283 0.22502602487805684 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 109710 6830 TEDLKTLSA True H1975_Epitope_Rep3 976.50769088956 976.50658993586 31.227 2 -0.07345443831086378 0.020097640358014646 0.22521447358281949 ['GPSM2|p.K514Rfs*17|1|0.1|ENSG00000121957|chr1:108922514-108922514|A/-|frameshift_variant', 'ENSG00000121957|ENST00000264126|GPSM2', 'nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-3|GPSM1'] 62219 9768 LLEVLSQK True NCI_RA007_Epitope_Rep2 928.5593325396 928.55822993586 42.615 2 -0.07347546349084356 0.020116345293304045 0.22527307905319044 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 110440 21494 TFAELSLGL True PC9_epitope_Rep4 949.5120479940099 949.51094993586 90.863 2 -0.07349513400301412 0.020116345293304045 0.22532791564991186 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 90681 4639 REQFSRAPVSA True H1975_Epitope_Rep3 1246.64183337694 1246.64017490379 22.965 3 -0.07351999011719534 0.020116345293304045 0.22539721828313053 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 2805 6051 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 28.347 2 -0.07358420611229265 0.020116345293304045 0.22557631309843768 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 54216 17956 KVVQFLMKL True PC9_epitope_Rep4 1104.6729228232 1104.6718299358602 77.122 2 -0.07363207785587854 0.020135866249033886 0.22570987237546153 ['ENST00000314607.10_1_1:35734570-35791000:+|nuORF', 'ENST00000441447.1_1_1:35734647-35790997:+|nuORF'] 54766 16968 KYNANFVTF True PC9_epitope_Rep2 1102.54474510462 1102.5441749679298 70.515 1 -0.07363330089533983 0.020135866249033886 0.2257132851149093 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 71785 5127 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 24.796 2 -0.0736924994970116 0.02019647324424919 0.22587850319145394 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 3774 5728 AGTAGGAEVAP True H1975_Epitope_Rep2 899.4348603024699 899.43376993586 27.031 2 -0.07372400210186081 0.02021516747676476 0.22596644953185868 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 2804 5931 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 27.885 2 -0.07373719325674935 0.02021516747676476 0.22600328072404752 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 56115 22554 LAVADILFL True PC9_epitope_Rep4 973.58481901145 973.58372993586 94.992 2 -0.0737462954082427 0.02021516747676476 0.22602869675656967 ['ENSG00000126353|ENST00000246657|CCR7'] 59479 21643 LFQPLVAV True PC9_epitope_Rep1 885.5323895157699 885.53128993586 88.078 2 -0.07375920955478321 0.02021516747676476 0.22606475958292627 ['FUT3|p.L24P|1|0.17|ENSG00000171124|chr19:5844769-5844769|A/G|missense_variant'] 5954 10511 APGYSYTAA True PC9_epitope_Rep5 899.4024975450299 899.40140993586 45.418 2 -0.07381857483595346 0.020233447210021148 0.22623057548514944 ['ENSG00000172115|ENST00000305786|CYCS'] 7013 14167 AQMDYYGTRL True PC9_epitope_Rep2 1216.55465816532 1216.5535699358602 59.762 2 -0.07382900376626543 0.020233447210021148 0.22625971145868712 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000397102.5_1_3:10355120-10362775:-|nuORF', 'ENST00000397099.1_1_3:10357003-10360966:-|nuORF'] 96131 20036 RYNPRILFQL True PC9_epitope_Rep5 1318.7509899031 1318.74934490379 82.12 3 -0.0738423161326382 0.020233447210021148 0.22629690587175985 ['ENSG00000164961|ENST00000318410|WASHC5'] 76945 5161 NRDRTQIAL True PC9_epitope_Rep6 1085.59415490853 1085.59304993586 27.59 2 -0.07385825481560578 0.020233447210021148 0.22634144227442135 ['ENSG00000241685|ENST00000262942|ARPC1A'] 13311 7672 DLTREGGSIP True NCI_RA007_Epitope_Rep3 1043.5247379360299 1043.52364993586 37.297 2 -0.07385860231625604 0.020233447210021148 0.22634241332249752 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2'] 13100 8038 DLQNEDLK True H1975_Epitope_Rep1 973.47163973401 973.47054993586 35.863 2 -0.07388247636729921 0.02027164409743402 0.22640913155724296 ['KIF27|p.E692Q|1|0.4|ENSG00000165115|chr9:83888498-83888498|C/G|missense_variant'] 90541 8981 RELVKNWVP True NCI_RA007_Epitope_Rep4 1139.64512785223 1139.64349490379 41.381 3 -0.0739024177478147 0.02027164409743402 0.22646486731413737 ['ENSG00000127540|ENST00000591899|UQCR11'] 82395 18174 PPLPPLPPP True PC9_epitope_Rep3 923.54803957991 923.54694993586 75.11 2 -0.07391605341576472 0.02027164409743402 0.2265029827821602 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 74995 6893 NHQGTYVL True PC9_epitope_Rep6 930.4559301002199 930.45482993586 35.425 2 -0.07399487538558429 0.02027164409743402 0.2267233764626864 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A'] 316 11185 AAIAAVNAL True NCI_RA007_Epitope_Rep3 812.47560291564 812.4745099358599 51.104 2 -0.07399811997221029 0.02027164409743402 0.22673245098744566 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39', 'ENST00000496183.5_1_20:34292405-34295154:-|nuORF', 'ENST00000397254.2_1_X:43889279-43890164:+|nuORF'] 101276 24173 SLIDQFFGV True PC9_epitope_Rep3 1024.5229470308798 1024.52184993586 98.268 2 -0.07401538499659376 0.02027164409743402 0.22678074128172473 ['nc|ENSG00000101557|P54578-2|USP14', 'nc|ENSG00000101557|P54578-3|USP14', 'ENSG00000101557|ENST00000261601|USP14'] 39271 10536 HILDSQTVVLK True PC9_epitope_Rep4 1251.7186867153102 1251.71704490379 48.254 3 -0.07402788978168487 0.020289501504431977 0.22681572046977827 ['nc|ENSG00000138182|Q96Q89-4|KIF20B', 'nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B'] 110928 4772 TGYGMPRQ True NCI_RA007_Epitope_Rep5 908.4174364165199 908.41632993586 25.039 2 -0.07403677042358761 0.020289501504431977 0.22684056364932276 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 111389 9824 THSEPLSTI True PC9_epitope_Rep5 983.49237517859 983.49126993586 42.755 2 -0.07413202479993693 0.020289501504431977 0.2271071208812342 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-5|CCDC14'] 108450 13708 SYLPTAERL True PC9_epitope_Rep4 1048.55530978832 1048.5542099358602 60.615 2 -0.07417737609875309 0.020289501504431977 0.22723408697516992 ['ENSG00000173227|ENST00000527043|SYT12'] 23716 22597 EYFESPFTI True PC9_epitope_Rep2 1131.5124419168299 1131.5113499358602 92.419 2 -0.07418589926536212 0.020289501504431977 0.22725795259378204 ['ENSG00000198938|ENST00000362079|MT-CO3'] 132407 15157 VVAGVANALA True PC9_epitope_Rep3 883.5127167003499 883.51160993586 63.444 2 -0.07419856951942658 0.020289501504431977 0.22729343279039987 ['ENSG00000244734|ENST00000335295|HBB', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070'] 1009 8125 AEAAVVAVA True H1975_Epitope_Rep3 799.4439684341899 799.44341496793 36.229 1 -0.07424246377499513 0.020307767365275547 0.22741637066159426 ['ENSG00000211450|ENST00000534355|SELENOH'] 46555 7876 ITADVNHNL True PC9_epitope_Rep4 995.50360856863 995.50250993586 37.722 2 -0.0742501000243338 0.020307767365275547 0.22743776153395667 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 5190 21107 ALMPVLNQV True PC9_epitope_Rep3 983.54738795691 983.54628993586 86.469 2 -0.07426144591567052 0.020307767365275547 0.2274695458548837 ['ENSG00000223496|ENST00000435634|EXOSC6'] 323 18058 AAIDWFDGK True PC9_epitope_Rep4 1021.4868958753299 1021.48578993586 77.522 2 -0.07428271176205063 0.020307767365275547 0.22752912599387903 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 137016 23549 YALDLSTFL True PC9_epitope_Rep2 1041.53826274185 1041.53767496793 96.056 1 -0.07428704670766707 0.020307767365275547 0.22754127211018588 ['ENSG00000137331|ENST00000259874|IER3'] 120390 4188 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 21.227 2 -0.07429109603907501 0.02032768223767126 0.22755261826083362 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 102391 11572 SLTGRLDEV True PC9_epitope_Rep4 988.5189242795999 988.51782993586 52.271 2 -0.07434557100094398 0.020367509553622244 0.22770528414371552 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 45643 17044 IRDPFIHEI True PC9_epitope_Rep3 1138.6134933707801 1138.6118549037901 70.714 3 -0.07436495873485237 0.020367509553622244 0.2277596307980907 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 131763 21643 VTPQSLFILFG True H1975_Epitope_Rep1 1220.6805103014397 1220.6794099358601 89.938 2 -0.07441297025331864 0.020387421997276257 0.22789424256631222 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 93199 9495 RPPPIGAEV True PC9_epitope_Rep5 934.5236157372199 934.52250993586 41.479 2 -0.0744707892260364 0.02040733363144843 0.2280564056614581 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 52848 10627 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54346496793 48.627 1 -0.07449687981801234 0.020427244456188133 0.22812960037475946 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 106428 9380 STIKTLEEA True PC9_epitope_Rep1 990.5233409536999 990.52224993586 40.938 2 -0.07455721632679989 0.02044299939036781 0.22829891458361765 ['ENSG00000181789|ENST00000314797|COPG1'] 104694 8304 SQTTVYEKL True PC9_epitope_Rep6 1067.54989005471 1067.5487899358602 41.567 2 -0.07456806186702807 0.02044299939036781 0.22832935573566734 ['ENSG00000118193|ENST00000367350|KIF14'] 142281 14097 YYAEVETRI True PC9_epitope_Rep3 1142.5607890915799 1142.5596899358602 59.309 2 -0.0745783464373467 0.02044299939036781 0.22835822426949576 ['ENSG00000112685|ENST00000230449|EXOC2'] 14477 4859 DTFYRIHRRGP True H1975_Epitope_Rep2 1416.7374650972797 1416.7358249037902 23.777 3 -0.0745893477548924 0.02044299939036781 0.228389106749044 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 73285 8505 MTDDKITEV True PC9_epitope_Rep4 1050.49032657326 1050.48922993586 40.191 2 -0.07459230148557323 0.02044299939036781 0.22839739871081227 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.E1969K|1|0.23|ENSG00000148773|chr10:128105935-128105935|C/T|missense_variant'] 38643 15578 HFLDRHLVF True PC9_epitope_Rep4 1182.62981214126 1182.6281549037901 67.842 3 -0.07460509834898495 0.02044299939036781 0.22843332491212767 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 72960 11986 MQDPNFHTM True PC9_epitope_Rep5 1119.4477505686302 1119.44664993586 51.1 2 -0.07460720880050672 0.02044299939036781 0.22843925011693486 ['ENSG00000140396|ENST00000452400|NCOA2', 'ENST00000518287.6_1_8:71025838-71050550:-|nuORF'] 89242 18831 QVVGGIYGV True PC9_epitope_Rep3 890.4861675993399 890.48506993586 77.657 2 -0.07461377744426667 0.02044299939036781 0.22845769243324393 ['ENSG00000167658|ENST00000309311|EEF2'] 141474 13712 YTIDTDNSTV True PC9_epitope_Rep1 1127.4982484046702 1127.49714993586 57.593 2 -0.07461649166904386 0.02044299939036781 0.22846531319100732 ['nc|ENSG00000149657|Q9BX40-2|LSM14B', 'ENSG00000149657|ENST00000279068|LSM14B'] 89807 17861 RALLLGAL True PC9_epitope_Rep4 825.5436229058099 825.54252993586 76.743 2 -0.07462976312162192 0.02044299939036781 0.22850257744939584 ['ENST00000525095.2_1_11:134094621-134094950:+|nuORF', 'ENST00000281187.9_1_11:134094584-134094950:+|nuORF'] 40491 4679 HRDNAGYTAL True PC9_epitope_Rep4 1116.5312202987998 1116.53012993586 24.531 2 -0.07465514654352855 0.02044299939036781 0.2285738589105493 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 111909 15331 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.5336349679301 63.981 1 -0.07468500271047546 0.0204624888238641 0.22865771513936298 ['ENSG00000213719|ENST00000375784|CLIC1'] 110679 6245 TGAPHLEEK True NCI_RA007_Epitope_Rep5 980.4927095317599 980.49160993586 30.697 2 -0.07469211369981639 0.0204624888238641 0.22867768989043466 ['nc|ENSG00000258597|P20848|SERPINA2'] 26294 15071 FHGPLLYEA True PC9_epitope_Rep6 1045.5232813840498 1045.52218993586 70.024 2 -0.07470886327848092 0.020479479886225112 0.22872474291477826 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000558539.5_1_15:79170271-79178570:+|nuORF', 'ENST00000557961.5_1_15:79165359-79178570:+|nuORF', 'ENST00000561171.5_1_15:79170562-79187198:+|nuORF', 'ENST00000559619.5_1_15:79165359-79179692:+|nuORF', 'ENST00000558522.5_1_15:79165359-79183469:+|nuORF', 'ENST00000558893.5_1_15:79165359-79184661:+|nuORF'] 34636 16957 GPYKIILTA True PC9_epitope_Rep5 974.5800679841799 974.57896993586 70.244 2 -0.074738578385653 0.020479479886225112 0.22880823087500413 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF', 'GANAB|p.P155L|1|0.17|ENSG00000089597|chr11:62634917-62634917|G/A|missense_variant'] 52792 6876 KNLQTVNVDEN True PC9_epitope_Rep5 1272.6309939097198 1272.62988993586 31.419 2 -0.07476601049128795 0.020479479886225112 0.22888531820608202 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 142766 17281 YYQSSVQYL True PC9_epitope_Rep4 1149.5342399905699 1149.5331499358601 74.476 2 -0.07477777847310396 0.020479479886225112 0.22891839160770935 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 24712 19712 FAMPYFIQV True NCI_RA007_Epitope_Rep4 1114.55213898418 1114.5510499358602 85.187 2 -0.07477821323063077 0.020479479886225112 0.2289196135212668 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|12|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 109100 16218 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.57388993586 70.325 2 -0.0748072422787646 0.020479479886225112 0.22900120898104617 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 70534 14291 LVYEGQLSQA True PC9_epitope_Rep4 1106.56078909158 1106.5596899358602 62.87 2 -0.07480990114823162 0.020479479886225112 0.2290086833242551 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 2547 12978 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.4960299358602 54.997 2 -0.07481325060805198 0.020479479886225112 0.22901809916076468 ['ENSG00000123607|ENST00000243344|TTC21B'] 106797 10164 SVAEKLSKL True PC9_epitope_Rep5 973.5807962601699 973.57968993586 44.083 2 -0.07487622395505796 0.020487309644670052 0.2291951632463727 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 114533 10441 TQAPGNPVL True PC9_epitope_Rep6 895.4763311916299 895.4752299358599 50.915 2 -0.07487832797240382 0.020487309644670052 0.22920108037298367 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 45217 11606 IPSGTILKA True PC9_epitope_Rep5 898.5487678558999 898.54766993586 49.639 2 -0.074882253500476 0.020487309644670052 0.22921212033982624 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'ENST00000509936.5_1_12:112130513-112147506:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-4|ACAD10', 'ENST00000507135.5_1_12:112130513-112159479:+|nuORF'] 2717 7217 AETAAVTVAA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 32.731 2 -0.07489428862710878 0.020487309644670052 0.22924596903083128 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 87193 21020 QPILLELEA True PC9_epitope_Rep4 1024.580461907 1024.57936993586 89.015 2 -0.07489497398414088 0.020487309644670052 0.2292478966677987 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 55572 8061 LAHAAFSAA True PC9_epitope_Rep3 857.43955176009 857.43844993586 35.984 2 -0.07491598929090945 0.020487309644670052 0.2293070083575522 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'ENSG00000169446|ENST00000305963|MMGT1'] 134241 5624 VYMNRVKEI True NCI_RA007_Epitope_Rep3 1150.6168644990598 1150.61521490379 29.112 3 -0.07492711067252517 0.020487309644670052 0.22933829361371724 ['ENSG00000197223|ENST00000410067|C1D', 'ENST00000455013.2_1_10:81784495-81784867:-|nuORF'] 57649 12877 LEEELKTFKRI True H1975_Epitope_Rep1 1404.7976653119997 1404.7965699358601 54.602 2 -0.07493508685584409 0.020487309644670052 0.22936073252817238 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 138727 19936 YIPTELDQV True PC9_epitope_Rep5 1076.53899101784 1076.53847496793 81.738 1 -0.07495013286403608 0.020487309644670052 0.2294030635778309 ['ENSG00000149100|ENST00000531120|EIF3M'] 35056 9254 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 40.541 2 -0.07495280860001652 0.020487309644670052 0.22941059201589994 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 28139 16074 FRDAFTQEL True PC9_epitope_Rep4 1125.54547338061 1125.54436993586 69.763 2 -0.07508509313159437 0.020487309644670052 0.22978294289415566 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 134440 22418 VYPNWAIGL True PC9_epitope_Rep3 1031.5440168286298 1031.54347496793 91.508 1 -0.0750959861616307 0.020487309644670052 0.22981361789415763 ['ENSG00000131389|ENST00000622186|SLC6A6'] 81913 14566 PLSIAVEAA True H1975_Epitope_Rep3 869.4858332461699 869.48528496793 61.396 1 -0.07510985917403115 0.020487309644670052 0.22985268758004024 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000466876.1_1_3:195006441-195012466:-|nuORF'] 128385 5623 VPRPASVSA True PC9_epitope_Rep5 882.49231560894 882.49120993586 26.63 2 -0.07511003846814109 0.020487309644670052 0.22985319253663059 ['ENSG00000108773|ENST00000225916|KAT2A'] 131218 18082 VTERNLLEV True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 74.565 2 -0.07513466104306002 0.020487309644670052 0.2299225438674155 ['VPS45|p.S343T|1|0.11|ENSG00000136631|chr1:150082807-150082807|G/C|missense_variant'] 70777 8708 LYAEKPPRCSC True H1975_Epitope_Rep1 1265.58966377505 1265.58856993586 38.421 2 -0.0751716620718344 0.020487309644670052 0.23002677989676293 ['ENST00000493450.1_1_20:37659368-37662889:+|nuORF'] 67744 21585 LSYGQEVLI True PC9_epitope_Rep4 1020.5491617787198 1020.54806993586 91.209 2 -0.0751813706442166 0.020487309644670052 0.23005413397655833 ['ENSG00000254656|ENST00000649591|RTL1'] 78170 5558 NYARGHYTI True PC9_epitope_Rep4 1093.5304920228102 1093.52938993586 28.145 2 -0.07522936313525155 0.020487309644670052 0.23018937779042395 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 36910 21764 GVLPQLSMV True PC9_epitope_Rep3 942.5208388559 942.51974993586 89.013 2 -0.07523869982200064 0.020487309644670052 0.2302156934191303 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 109539 17071 TDRQLFDTI True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 70.915 2 -0.07524943014005107 0.020487309644670052 0.2302459388965113 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 118888 11547 VADAVTYQL True NCI_RA007_Epitope_Rep3 978.5022115863001 978.50110993586 52.551 2 -0.07525017369349743 0.020487309644670052 0.23024803481993292 ['ENSG00000142507|ENST00000270586|PSMB6'] 119276 9167 VALLASRNL True H1975_Epitope_Rep3 955.58146496651 955.58036993586 40.251 2 -0.07526661822133664 0.020487309644670052 0.23029439100101812 ['nc|ENSG00000157992|Q53RY4-2|KRTCAP3', 'ENSG00000157992|ENST00000288873|KRTCAP3', 'KRTCAP3-AVIL|1|fusion'] 138609 6476 YIDQEELNK True PC9_epitope_Rep6 1150.5506183307 1150.5495299358602 33.557 2 -0.07531614927699545 0.020487309644670052 0.23043404460868458 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 78625 12114 NYTARFSRF True PC9_epitope_Rep1 1160.57269118796 1160.5710449037902 51.459 3 -0.07532909564958608 0.020487309644670052 0.23047055414186232 ['ENSG00000144231|ENST00000272645|POLR2D'] 118350 15815 TYNEPGSQVF True PC9_epitope_Rep2 1140.50875351872 1140.5076499358602 66.092 2 -0.07534309050423464 0.020487309644670052 0.23051002373088073 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 98213 5173 SETKVFTA True NCI_RA007_Epitope_Rep5 881.4494477374499 881.44834993586 26.592 2 -0.07534611512030527 0.020487309644670052 0.2305185544811061 ['UBAP2|p.D873Tfs*30|1|0.22|ENSG00000137073|chr9:33923974-33923974|C/-|frameshift_variant', 'ENSG00000137073|ENST00000379238|UBAP2'] 25970 20843 FGANAILGV True PC9_epitope_Rep2 860.4756029156399 860.4745099358599 85.618 2 -0.07534886318651819 0.020487309644670052 0.2305263053766115 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 107317 14058 SVLEKQVSL True PC9_epitope_Rep1 1001.5757108797299 1001.5746099358599 58.913 2 -0.07539264087888457 0.020487309644670052 0.2306497976379881 ['ENST00000539855.5_1_11:95532492-95564417:+|nuORF', 'nc|ENSG00000166037|Q86XR8-2|CEP57', 'nc|ENSG00000166037|Q86XR8-4|CEP57', 'nc|ENSG00000166037|Q86XR8-5|CEP57', 'ENSG00000166037|ENST00000325542|CEP57', 'ENST00000432815.2_1_1:173332252-173332432:-|nuORF', 'ENST00000541768.1_1_11:95546181-95551118:+|nuORF', 'nc|ENSG00000166037|Q86XR8-3|CEP57'] 1008 8400 AEAAVVAVA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 37.263 1 -0.0754552566364814 0.020487309644670052 0.23082648790489133 ['ENSG00000211450|ENST00000534355|SELENOH'] 117276 13326 TVMDEIHTV True PC9_epitope_Rep6 1043.49574630687 1043.49464993586 62.916 2 -0.07545760548078416 0.020487309644670052 0.23083311723926325 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 20474 21764 EPIPYEFMA True PC9_epitope_Rep5 1095.49468367771 1095.4935899358602 88.744 2 -0.07547704404675366 0.020525834940615165 0.23088798395723154 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 2871 16650 AEVISLFSA True H1975_Epitope_Rep1 935.49639792987 935.49530993586 69.432 2 -0.07553121445510858 0.020525834940615165 0.23104091829820492 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 28627 20977 FSIPVVSDV True PC9_epitope_Rep4 961.51204799401 961.51094993586 88.849 2 -0.07553977266393554 0.020525834940615165 0.231065084554507 ['ENSG00000126749|ENST00000599672|EMG1'] 108419 18039 SYLPFTEAF True NCI_RA007_Epitope_Rep3 1073.5069626135698 1073.50637496793 79.049 1 -0.07556016164517014 0.020525834940615165 0.2311226630852704 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 126110 16739 VLERQRRNELK True NCI_RA007_Epitope_Rep2 1439.8320937581095 1439.83098993586 69.844 2 -0.075564153718525 0.020525834940615165 0.2311339375525662 ['nc|ENSG00000136997|P01106-1|MYC', 'nc|ENSG00000136997|P01106-3|MYC', 'ENSG00000136997|ENST00000621592|MYC'] 78169 5616 NYARGHYTI True PC9_epitope_Rep2 1093.5304920228102 1093.52938993586 26.988 2 -0.07559128486371042 0.02056560488864527 0.23121056900799858 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 77890 20643 NVIDNLIVA True PC9_epitope_Rep4 969.5494961318899 969.5489449679301 87.56 1 -0.07559478290526958 0.02056560488864527 0.23122045009392647 ['ENSG00000143621|ENST00000361891|ILF2'] 83133 20100 PSQPQIIVV True PC9_epitope_Rep1 979.5702315764698 979.56912993586 82.142 2 -0.07565743819076798 0.02058507074849266 0.23139747134822766 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ENST00000470175.1_1_1:35859216-35862664:+|nuORF'] 142120 22190 YVPPELITL True PC9_epitope_Rep3 1043.59029831471 1043.58920993586 90.64 2 -0.07571424912138691 0.02058507074849266 0.23155803911614356 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 59555 10849 LFTELCHPP True H1975_Epitope_Rep2 1055.5110024481899 1055.5099099358602 46.76 2 -0.07574499917091743 0.02060328028580708 0.23164497289053732 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant', 'WDFY3|p.N1161Kfs*4|1|0.29|ENSG00000163625|chr4:84794523-84794524|-/T|frameshift_variant', 'ENST00000426414.6_1_4:85730999-85781744:-|nuORF', 'ENST00000504990.1_1_4:85771028-85781672:-|nuORF'] 84994 12467 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 56.262 2 -0.07575028339977058 0.02060328028580708 0.23165991363182184 ['ENSG00000113369|ENST00000265138|ARRDC3'] 110304 7265 TESSQSFVA True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 32.881 2 -0.07579057384219488 0.02060328028580708 0.2317738475426813 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'PJA2|p.Q111E|1|0.27|ENSG00000198961|chr5:109379156-109379156|G/C|missense_variant'] 9597 12255 AYAGSGNVL True PC9_epitope_Rep1 850.41848196234 850.41738993586 51.999 2 -0.0758258531494059 0.02060328028580708 0.23187363390306728 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 77979 16398 NVPDSFNEV True PC9_epitope_Rep2 1019.45598966987 1019.45488993586 68.319 2 -0.07583509285222857 0.02060328028580708 0.23189977164781536 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 132364 5171 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 27.63 2 -0.07594442688273505 0.0206223232589766 0.2322091731335216 ['ENSG00000160161|ENST00000291495|CILP2'] 109172 8537 TAMHLRRKEL True PC9_epitope_Rep2 1253.7026598116897 1253.7010049037901 38.199 3 -0.07594449986654336 0.0206223232589766 0.2322093797372832 ['ENSG00000218823|ENST00000404991|PAPOLB'] 45044 10129 IPGTGFTVDA True PC9_epitope_Rep3 976.4865615221598 976.48546993586 43.913 2 -0.07595614443674428 0.0206223232589766 0.23224234455275414 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 4517 4820 AKFSRPAQL True NCI_RA007_Epitope_Rep3 1016.5767139392399 1016.57560993586 25.929 2 -0.07595960352721645 0.02063885055605163 0.2322521374018214 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 35064 8352 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42883496793 39.583 1 -0.07596989853625989 0.02063885055605163 0.2322812842796601 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 83167 6634 PSSPPGFHTG True PC9_epitope_Rep4 982.4508447197801 982.44974993586 32.681 2 -0.07597337639670916 0.02063885055605163 0.23229113109176888 ['ENST00000046640.7_1_17:3540070-3540534:+|nuORF', 'ENST00000381870.7_1_17:3539773-3540534:+|nuORF'] 110963 20222 THALEWPSL True PC9_epitope_Rep1 1052.52909504048 1052.5279899358602 82.613 2 -0.07600115186313483 0.02063885055605163 0.23236977881018298 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 67624 21240 LSVPGLVSV True PC9_epitope_Rep2 869.52221875489 869.52167496793 87.158 1 -0.07604789152292651 0.02063885055605163 0.23250215462803386 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 53133 7961 KPYDGIPAS True PC9_epitope_Rep5 946.4759968384599 946.47488993586 35.561 2 -0.0760516336596104 0.02063885055605163 0.23251275471291138 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'ENST00000485503.1_1_7:55266411-55268235:+|nuORF', 'ENSG00000146648|ENST00000275493|EGFR'] 9 6179 AAAAAAAAAAA True PC9_epitope_Rep5 799.41881631551 799.41770993586 28.751 2 -0.07608191678755129 0.02063885055605163 0.23259854443989922 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 46826 10991 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1118.5277749905702 1118.5266699358601 47.365 2 -0.07612418646206832 0.02063885055605163 0.23271831747654273 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 107341 13361 SVLGKVNEI True PC9_epitope_Rep1 957.54949613189 957.54838993586 56.252 2 -0.07613729003077829 0.02063885055605163 0.23275545326670297 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 98883 11979 SGVSLAALK True PC9_epitope_Rep1 844.50181766348 844.50072993586 50.939 2 -0.07623085819343096 0.02065830593774098 0.23302071312111505 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 107268 21589 SVLDDFYTA True PC9_epitope_Rep1 1029.46549172441 1029.46497496793 87.865 1 -0.0762386927310924 0.02065830593774098 0.23304293036074966 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN', 'nc|ENSG00000101336|P08631-3|HCK', 'nc|ENSG00000101336|P08631-2|HCK', 'nc|ENSG00000101336|P08631-4|HCK', 'ENSG00000101336|ENST00000375852|HCK'] 7649 17991 ASIDILHSI True PC9_epitope_Rep6 967.5338460677501 967.53274993586 81.83 2 -0.07627623119668006 0.020695952115248047 0.23314939682655644 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 128102 13988 VPLGPGQISA True PC9_epitope_Rep6 937.5232813840499 937.52218993586 65.661 2 -0.07630879445975446 0.020695952115248047 0.23324177221201384 ['LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 24657 19445 FALASHLIEA True PC9_epitope_Rep5 1070.5760452329 1070.57494993586 79.846 2 -0.07633738576113076 0.020695952115248047 0.2333228949304774 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 88805 8246 QTVAVGVIK True PC9_epitope_Rep4 913.5596668927699 913.55856993586 39.179 2 -0.07634091165469686 0.020695952115248047 0.23333289999480897 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 107338 22004 SVLGALIGV True PC9_epitope_Rep4 827.5116540711899 827.51054993586 92.859 2 -0.0763458991689585 0.020695952115248047 0.2333470529130713 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 132357 6713 VVAAHLAGA True PC9_epitope_Rep3 807.46028720467 807.45918993586 30.843 2 -0.07636832276159618 0.020695952115248047 0.23341068892744457 ['ENSG00000160161|ENST00000291495|CILP2'] 73440 16878 MVADKFTEL True PC9_epitope_Rep3 1052.52123277872 1052.52012993586 70.077 2 -0.07638033707008209 0.020695952115248047 0.23344478793042434 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 2768 3875 AETQQPPAA True H1975_Epitope_Rep1 911.4348603024698 911.43376993586 19.582 2 -0.07639110274785274 0.020714981334198995 0.2334753451700279 ['ENSG00000065978|ENST00000321358|YBX1'] 81287 16424 PLAAIAPS True PC9_epitope_Rep5 738.4275900940601 738.4270449679301 68.175 1 -0.07640131267532349 0.020714981334198995 0.2335043268042556 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 45507 18151 IQNLVSASL True PC9_epitope_Rep1 943.53384606775 943.53274993586 74.608 2 -0.07641844353810275 0.020714981334198995 0.23355295803367707 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 132961 18313 VVPEQGIVDL True PC9_epitope_Rep6 1067.5862755634298 1067.5851699358602 83.083 2 -0.07644392408483328 0.020731064140533086 0.23362530170224868 ['ENSG00000166535|ENST00000299698|A2ML1', 'A2ML1|p.P541Sfs*8|1|0.19|ENSG00000166535|chr12:8846154-8846155|-/T|frameshift_variant'] 96905 7387 SAVEPKTAL True PC9_epitope_Rep5 914.5072969667399 914.50618993586 33.371 2 -0.07644682638438917 0.020731064140533086 0.23363354253611943 ['LMO7-ITGBL1|1|fusion', 'nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7', 'ENSG00000136153|ENST00000377534|LMO7', 'ENST00000563635.5_1_13:76195947-76378681:+|nuORF', 'LMO7-ITGBL1|2|fusion', 'nc|ENSG00000136153|Q8WWI1-5|LMO7'] 110699 6937 TGEDSAFQEPD True H1975_Epitope_Rep2 1194.46767655238 1194.4665699358602 31.605 2 -0.07646572922533809 0.020731064140533086 0.2336872190777634 ['ENSG00000166483|ENST00000450114|WEE1'] 38302 7457 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.55982490379 33.63 3 -0.07656137374326699 0.020731064140533086 0.23395890507294811 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 141476 13297 YTIDTENSTV True PC9_epitope_Rep2 1141.51389846881 1141.51280993586 56.424 2 -0.07660441421105296 0.020731064140533086 0.23408121598982443 ['nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A'] 17695 7108 EHMGNVVEA True PC9_epitope_Rep5 984.4334804034798 984.43238993586 32.309 2 -0.07660858138616686 0.020731064140533086 0.23409305980348963 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 111890 15509 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.5336349679301 64.478 1 -0.07662276960074961 0.020731064140533086 0.2341333873217385 ['ENSG00000213719|ENST00000375784|CLIC1'] 133730 18022 VYDPTTNAW True PC9_epitope_Rep2 1065.4767251144501 1065.47562993586 74.627 2 -0.07664083316933946 0.020731064140533086 0.2341847348263193 ['nc|ENSG00000109466|O95198-3|KLHL2', 'ENSG00000109466|ENST00000226725|KLHL2', 'nc|ENSG00000109466|O95198-2|KLHL2'] 6987 22156 AQLGGVLLL True PC9_epitope_Rep2 882.5538532363399 882.55274993586 90.709 2 -0.07669973682243621 0.020731064140533086 0.23435221302835277 ['nc|ENSG00000237515|B4DS77-3|SHISA9', 'SHISA9|p.A335Gfs*5|1|0.83|ENSG00000237515|chr16:13235134-13235135|-/G|frameshift_variant', 'ENSG00000237515|ENST00000558583|SHISA9'] 27764 14440 FPTVPGVY True H1975_Epitope_Rep3 878.4538048418999 878.4532549679301 60.899 1 -0.07673422946002396 0.020731064140533086 0.2344503119071136 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 19278 8434 ELKKSTVIL True NCI_RA007_Epitope_Rep5 1029.6433965167298 1029.6422899358602 39.122 2 -0.07677820335823046 0.020744616133349558 0.23457540538165383 ['ASPM|p.F3079L|1|0.05|ENSG00000066279|chr1:197093109-197093109|A/T|missense_variant'] 26267 22137 FHFIIPAL True PC9_epitope_Rep5 956.5483739330798 956.54726993586 90.186 2 -0.07678074060609305 0.020744616133349558 0.2345826241489138 ['ENSG00000009335|ENST00000348165|UBE3C', 'nc|ENSG00000009335|Q15386-2|UBE3C', 'UBE3C|p.A288V|1|0.16|ENSG00000009335|chr7:157182200-157182200|C/T|missense_variant', 'nc|ENSG00000009335|Q15386-3|UBE3C'] 25413 8281 FEDESPPAP True H1975_Epitope_Rep2 987.4185415319898 987.41744993586 36.803 2 -0.07679387270595223 0.020744616133349558 0.23461998826225103 ['ENSG00000105464|ENST00000263269|GRIN2D'] 73805 16590 NAIGSASVVTV True PC9_epitope_Rep5 1016.55022440788 1016.54912993586 68.819 2 -0.07682938538696582 0.020744616133349558 0.2347210454360747 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 17309 12846 EHAKFLNSL True PC9_epitope_Rep1 1057.5556441414901 1057.5545499358602 54.286 2 -0.07684941849006657 0.020744616133349558 0.23477806239197854 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10'] 13485 8990 DNIQTVKRLRT True PC9_epitope_Rep4 1342.7680965192199 1342.76644490379 42.136 3 -0.07687195211420887 0.020744616133349558 0.2348422043304152 53345 5227 KQQAPPPPP True H1975_Epitope_Rep3 958.5236157372198 958.52250993586 25.191 2 -0.07688197318052986 0.020744616133349558 0.23487073205926115 ['ENSG00000125398|ENST00000245479|SOX9'] 118388 11799 TYPAELNNI True NCI_RA007_Epitope_Rep3 1033.50802524273 1033.5069299358602 53.527 2 -0.07689724783621288 0.020744616133349558 0.2349142188633417 ['ENSG00000106546|ENST00000242057|AHR'] 75766 15256 NLLQQYKTL True PC9_epitope_Rep2 1119.62880908175 1119.6277099358601 63.956 2 -0.07692085111782698 0.020744616133349558 0.23498142498703775 ['nc|ENSG00000155755|Q96Q45-4|TMEM237', 'nc|ENSG00000155755|Q96Q45-2|TMEM237', 'ENSG00000155755|ENST00000409883|TMEM237', 'nc|ENSG00000155755|Q96Q45-5|TMEM237', 'nc|ENSG00000155755|Q96Q45-3|TMEM237'] 120210 12527 VEAQLQELQVK True PC9_epitope_Rep4 1283.7085159544297 1283.7074099358601 56.004 2 -0.07698291522690222 0.020744616133349558 0.23515818660099203 ['ENSG00000100345|ENST00000216181|MYH9'] 118966 17969 VAEAALDLA True PC9_epitope_Rep6 871.4650978015899 871.46454496793 81.746 1 -0.07698342217057871 0.020744616133349558 0.23515963067066123 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'nc|ENSG00000007174|Q9NYC9-3|DNAH9', 'ENST00000581682.1_1_17:11787806-11828539:+|nuORF'] 34740 4715 GQEVNELKT True NCI_RA007_Epitope_Rep4 1016.51383889916 1016.51274993586 24.567 2 -0.07699593413310139 0.020744616133349558 0.23519527338066304 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 117036 8513 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.56438993586 37.687 2 -0.07702565081254237 0.020744616133349558 0.23527993765463925 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 54137 17689 KVPEWVDTV True PC9_epitope_Rep3 1071.5600608155898 1071.5589699358602 73.237 2 -0.07708498776810302 0.020744616133349558 0.2354490363626978 ['ENSG00000105372|ENST00000598742|RPS19'] 127739 14337 VPAPSPLSAA True PC9_epitope_Rep1 908.4967322830399 908.49562993586 59.971 2 -0.0771445528925661 0.020744616133349558 0.2356188453341438 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 109929 14135 TEGEPPFLP True H1975_Epitope_Rep1 985.4756624852898 985.47511496793 59.542 1 -0.07718493678714479 0.020744616133349558 0.23573400640867442 ['ENSG00000241058|ENST00000377304|NSUN6'] 135715 7665 WLSQCFDAK True H1975_Epitope_Rep1 1096.50116604048 1096.5000699358602 34.455 2 -0.07722978691012808 0.020764473283990673 0.2358619359930979 ['ENSG00000154127|ENST00000284273|UBASH3B', 'ENST00000530578.1_1_11:122665536-122667965:+|nuORF'] 111988 16966 TIREGETLEL True PC9_epitope_Rep5 1159.6084675599898 1159.60736993586 70.279 2 -0.07724427246649004 0.020783065350067926 0.23590326157181718 ['MDGA2|p.G334Dfs*22|2|0.16|ENSG00000139915|chr14:47061568-47061568|T/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2', 'nc|ENSG00000139915|Q7Z553|MDGA2'] 104531 9272 SQPEKVYTL True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 43.269 2 -0.07724503514770824 0.020783065350067926 0.23590543750945478 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 6258 14919 APRAALVFA True PC9_epitope_Rep3 914.5337864980999 914.53268993586 62.521 2 -0.07732801309436735 0.020783065350067926 0.23614223320718872 ['ENSG00000170006|ENST00000304385|TMEM154'] 90960 8408 REYVPPPVP True H1975_Epitope_Rep1 1052.5654805491997 1052.5643899358602 37.27 2 -0.07733592732804624 0.020783065350067926 0.23616482427931085 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1'] 139799 11292 YPIEHGIITN True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 48.758 2 -0.07734465981779558 0.02079996756340341 0.23618975227977854 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 14909 16023 DYAYLREHF True PC9_epitope_Rep2 1212.5563724174797 1212.55471490379 66.886 3 -0.07737058181317027 0.02079996756340341 0.2362637574902404 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 104521 10621 SQNKNIEVL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 51.67 2 -0.0773950119479159 0.02079996756340341 0.23633351394113017 ['OR4P4|p.V299Cfs*8|1|0.41|ENSG00000181927|chr11:55639252-55639252|G/-|frameshift_variant', 'ENSG00000181927|ENST00000641760|OR4P4'] 72911 10954 MPTTLEGA True PC9_epitope_Rep6 818.3844049527399 818.38385496793 53.016 1 -0.07740537492318927 0.02079996756340341 0.23636310684790351 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 109303 11975 TAVTVNQSL True PC9_epitope_Rep2 931.4974605590301 931.49691496793 51.381 1 -0.07740553153641387 0.02079996756340341 0.23636355409248977 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 119243 21231 VALGALVTV True PC9_epitope_Rep2 841.52730413533 841.52620993586 87.124 2 -0.07741141213399522 0.02079996756340341 0.23638034777222172 ['ENSG00000129473|ENST00000250405|BCL2L2'] 103464 8855 SPPVPGPSA True PC9_epitope_Rep5 807.41266830591 807.41156993586 39.006 2 -0.07741597981633375 0.02079996756340341 0.23639339246037983 ['ENSG00000143756|ENST00000366862|FBXO28'] 129482 25669 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 108.59 2 -0.07741968972308617 0.02079996756340341 0.23640398771552487 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 95770 9519 RYIDRIHIF True NCI_RA007_Epitope_Rep3 1231.68257599011 1231.68094490379 44.536 3 -0.07744238612817293 0.020815176635116235 0.2364688122434483 ['ENSG00000174231|ENST00000304992|PRPF8'] 123062 9032 VGKDSYVEL True NCI_RA007_Epitope_Rep3 1008.5127762699999 1008.51166993586 42.622 2 -0.0774551821439964 0.020815176635116235 0.23650536352081938 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3'] 107877 17327 SVVKVLTEL True PC9_epitope_Rep6 986.6011973515799 986.60010993586 79.261 2 -0.07747604569662773 0.020815176635116235 0.23656496529506624 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 45216 10348 IPSGTILKA True PC9_epitope_Rep4 898.5487678558999 898.54766993586 47.499 2 -0.0775086285932371 0.020815176635116235 0.2366580608787195 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'ENST00000509936.5_1_12:112130513-112147506:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-4|ACAD10', 'ENST00000507135.5_1_12:112130513-112159479:+|nuORF'] 76225 15273 NNWLRVVPR True PC9_epitope_Rep5 1152.6516102149997 1152.64996490379 63.757 3 -0.07753044168334405 0.020815176635116235 0.2367203950548518 ['nc|ENSG00000095713|Q9NQ79-3|CRTAC1', 'nc|ENSG00000095713|Q9NQ79-2|CRTAC1', 'ENSG00000095713|ENST00000370597|CRTAC1'] 43708 12172 IHEKELLLA True PC9_epitope_Rep4 1064.62299542532 1064.62188993586 54.637 2 -0.07754003338018543 0.020815176635116235 0.2367478073035432 ['ENSG00000258986|ENST00000556573|TMEM179'] 85124 6853 QELPQPQA True NCI_RA007_Epitope_Rep3 909.4555957470499 909.45448993586 34.068 2 -0.07755682360898683 0.020815176635116235 0.23679579606970536 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'ENST00000551520.1_1_12:57108340-57119068:-|nuORF'] 15372 17388 EAGTYSLNV True PC9_epitope_Rep3 952.4501760134399 952.44906993586 72.053 2 -0.07755746923354791 0.020815176635116235 0.2367976414476016 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 24537 3834 FAGDDAPR True H1975_Epitope_Rep1 847.38243080679 847.38132993586 19.38 2 -0.07758391081620168 0.020815176635116235 0.2368732250092386 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48076 19411 IYMESGIVKI True PC9_epitope_Rep5 1151.6260322004298 1151.62492993586 79.713 2 -0.07758975646729419 0.020815176635116235 0.23688993645684006 ['ENSG00000172244|ENST00000306862|C5orf34', 'ENST00000514462.1_1_5:43505848-43515051:-|nuORF'] 85922 7393 QHGGPAVAI True PC9_epitope_Rep2 848.4504507969599 848.44934993586 33.818 2 -0.07765799648015473 0.020815176635116235 0.23708506236061747 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 48445 14426 IYYTGKYQSL True PC9_epitope_Rep3 1234.6233893481399 1234.6222899358602 60.594 2 -0.07768228729217966 0.020815176635116235 0.23715453854909693 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant', 'MYCBP2|p.K641Gfs*11|1|0.09|ENSG00000005810|chr13:77257813-77257814|-/TTTTTCTTTTTGTTCCT|frameshift_variant'] 70779 9284 LYAEKPPRCSC True NCI_RA007_Epitope_Rep2 1265.58966377505 1265.58856993586 40.722 2 -0.07771379627977096 0.02085486714902414 0.23724467481753753 ['ENST00000493450.1_1_20:37659368-37662889:+|nuORF'] 126985 21420 VLRSALLIL True PC9_epitope_Rep4 996.6695516949198 996.6684499358599 90.569 2 -0.07775253533796689 0.02085486714902414 0.23735551665795807 ['ENSG00000278870|ENST00000623849|OR51G1'] 3452 10862 AGLAKSIGV True PC9_epitope_Rep1 814.4912529797799 814.49014993586 46.667 2 -0.07780498644783086 0.020874711199383892 0.23750563214271625 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3'] 28755 15039 FSSPPVIL True H1975_Epitope_Rep2 858.4851049701799 858.4845549679301 62.999 1 -0.07782659819507609 0.020894130998702982 0.23756749855647055 ['ENSG00000171867|ENST00000379440|PRNP'] 89644 4437 QYTHKIYHL True NCI_RA007_Epitope_Rep3 1201.6243924076498 1201.6227449037901 24.251 3 -0.07783521945656897 0.020894130998702982 0.2375921802145877 ['ENST00000460566.5_1_22:28293057-28315179:-|nuORF', 'ENSG00000180957|ENST00000335272|PITPNB', 'nc|ENSG00000180957|P48739-2|PITPNB', 'nc|ENSG00000180957|P48739-3|PITPNB', 'ENST00000471825.1_1_22:28306950-28315179:-|nuORF', 'ENSG00000174238|ENST00000313486|PITPNA'] 38407 6909 HEMVVYEA True NCI_RA007_Epitope_Rep3 976.4324177743199 976.43132993586 34.281 2 -0.07787071268987211 0.020911430366152662 0.23769380629162162 ['ENSG00000181789|ENST00000314797|COPG1'] 28133 17812 FRDAFTQEL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 73.309 2 -0.0779035001982606 0.020911430366152662 0.2377877039518322 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 85925 7010 QHGGPAVAI True PC9_epitope_Rep4 848.4504507969599 848.44934993586 34.212 2 -0.0779264989123718 0.020911430366152662 0.2378535789699554 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 28768 17013 FSSSVPTLSF True NCI_RA007_Epitope_Rep5 1070.52842633414 1070.52732993586 72.203 2 -0.07796799092122406 0.020911430366152662 0.23797244656901562 ['ENST00000344746.8_2_X:153626795-153628185:+|nuORF'] 118203 16588 TYKNFFYLI True NCI_RA007_Epitope_Rep3 1207.62774645259 1207.62664993586 73.034 2 -0.07800191452834755 0.020911430366152662 0.23806965337781608 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 28134 17906 FRDAFTQEL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 73.667 2 -0.07800317340050218 0.020911430366152662 0.23807326099857895 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 114356 22763 TPSDIFMVM True PC9_epitope_Rep1 1039.4718400581498 1039.47074993586 92.367 2 -0.07800833052089721 0.020911430366152662 0.23808804032529945 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 5857 6215 APFPHGDSA True PC9_epitope_Rep5 897.3980808709299 897.39698993586 28.887 2 -0.07802987477976103 0.020929148854265858 0.23814978688477814 ['ENSG00000010017|ENST00000011619|RANBP9'] 118626 11562 TYSPALNKMF True NCI_RA007_Epitope_Rep3 1170.5743309807401 1170.5732299358601 52.61 2 -0.07806935003499206 0.020929148854265858 0.23826294440341808 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant'] 47815 20423 IYGGTYML True PC9_epitope_Rep5 916.4364405255999 916.43589496793 83.592 1 -0.07811572453969731 0.020929148854265858 0.23839591217031855 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENST00000471972.1_1_X:153668686-153669692:+|nuORF', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 90332 4385 REFEERHIP True H1975_Epitope_Rep3 1211.6047195922297 1211.60308490379 21.987 3 -0.07813158257870326 0.020929148854265858 0.238441389531343 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 28078 9660 FQTEVGKQL True PC9_epitope_Rep4 1048.5553097883198 1048.5542099358602 44.782 2 -0.07813367158044776 0.020929148854265858 0.23844738064084278 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 39052 8320 HHSGNTYFL True PC9_epitope_Rep6 1074.48829285766 1074.4871899358602 41.632 2 -0.07815446925075178 0.020929148854265858 0.23850703086225775 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ASH2L|p.R592Afs*3|1|0.14|ENSG00000129691|chr8:38138869-38138869|C/-|frameshift_variant'] 4086 17869 AHPPLLVL True PC9_epitope_Rep4 858.53272386894 858.53162993586 76.773 2 -0.07818717322769175 0.020948560546202314 0.23860084439895482 ['nc|ENSG00000130810|Q9NQ55-2|PPAN', 'ENSG00000130810|ENST00000253107|PPAN', 'nc|ENSG00000130810|Q9NQ55-3|PPAN'] 37373 6837 GVSKPLPSVP True NCI_RA007_Epitope_Rep4 979.57023157647 979.56912993586 32.919 2 -0.07818948325052266 0.020948560546202314 0.238607471527827 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD', 'MADD|p.P744S|1|0.17|ENSG00000110514|chr11:47285013-47285013|C/T|missense_variant'] 2666 4293 AESPDARRPLP True H1975_Epitope_Rep3 1207.6309343400699 1207.62928490379 21.628 3 -0.07823536305166748 0.020967970665099978 0.23873911261938813 ['ENST00000552943.5_1_16:699416-703842:+|nuORF'] 71322 22039 LYQFNPAFF True PC9_epitope_Rep4 1145.5545815123298 1145.5540749679299 92.994 1 -0.078324165385973 0.020967970665099978 0.23899400925493314 ['ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 56455 24628 LDELITDLV True PC9_epitope_Rep1 1029.55939210925 1029.55828993586 99.605 2 -0.07834726967593383 0.02098695405558707 0.23906034891580727 ['ENSG00000232434|ENST00000436881|AJM1'] 33976 8942 GLSQSALPYRR True PC9_epitope_Rep5 1246.6782188856598 1246.6765649037902 39.341 3 -0.07837273067092172 0.02098695405558707 0.23913346570009605 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 88724 18640 QTIALITYL True H1975_Epitope_Rep2 1034.60119735158 1034.60010993586 77.36 2 -0.07837370554225327 0.02098695405558707 0.23913626546942837 ['ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 19289 19645 ELKPFIEEL True PC9_epitope_Rep6 1116.60667665484 1116.60556993586 88.223 2 -0.07844607568699485 0.021026617510027143 0.23934415210077292 ['ENST00000543815.5_1_6:131486241-131540820:+|nuORF', 'ENSG00000118507|ENST00000431975|AKAP7'] 35162 17404 GQWYGPNTV True PC9_epitope_Rep1 1020.4664947839199 1020.46597496793 71.744 1 -0.07845996675860023 0.021026617510027143 0.23938406480884414 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 30043 17650 FYGPQVNNI True PC9_epitope_Rep4 1050.51344497634 1050.5123499358601 75.915 2 -0.0785089929472479 0.02104602171447091 0.23952495557010667 ['ENSG00000106299|ENST00000223023|WASL'] 122218 13080 VGAPKIPSV True PC9_epitope_Rep1 866.5225531080599 866.52144993586 55.18 2 -0.07853686772833655 0.02104602171447091 0.2396050795045713 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 105344 10566 SRPYLVEL True NCI_RA007_Epitope_Rep3 975.5389314481899 975.53782993586 48.615 2 -0.07859188382412649 0.021065851040126395 0.23976325689360126 ['ENSG00000109265|ENST00000682029|CRACD'] 126195 13466 VLGAFSDG True PC9_epitope_Rep4 764.37046914076 764.36992496793 59.694 1 -0.0786192691225402 0.02108567956248734 0.23984201137020703 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 89179 14335 QVSHEFAL True PC9_epitope_Rep2 929.4606811274898 929.45958993586 60.404 2 -0.07862420353516537 0.02110422489569409 0.2398562030453951 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483495.5_1_20:34214165-34218616:-|nuORF'] 76472 6674 NQGIKVAAI True NCI_RA007_Epitope_Rep3 912.5392658013599 912.53816993586 33.332 2 -0.07867613401314753 0.02110422489569409 0.24000558275457845 ['ENSG00000261150|ENST00000615648|EPPK1'] 9416 15880 AVTGTHTLAL True PC9_epitope_Rep4 982.54474510462 982.54364993586 69.013 2 -0.07867797065916284 0.02110422489569409 0.24001086674396763 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 18431 16348 EIYDGLDFY True H1975_Epitope_Rep3 1133.49170647225 1133.4906099358602 68.356 2 -0.07868291382511428 0.02110422489569409 0.24002508839884706 ['NMD3|p.H192Y|1|0.5|ENSG00000169251|chr3:161235209-161235209|C/T|missense_variant'] 73353 8652 MTEKQLNLY True H1975_Epitope_Rep1 1138.5692456002998 1138.5681499358602 38.209 2 -0.07875955766282287 0.02114387556707712 0.2402456470206705 ['ENSG00000167985|ENST00000301761|SDHAF2', 'SDHAF2|p.D106Y|1|0.36|ENSG00000256591|chr11:61438059-61438059|G/T|missense_variant', 'ENST00000536250.1_1_11:61204372-61205638:+|nuORF', 'ENSG00000256591|ENST00000541135|unknown'] 35104 7980 GQVPPGESV True PC9_epitope_Rep5 868.42904664604 868.4279499358599 35.634 2 -0.078809201438467 0.02114387556707712 0.24038855915399673 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 48270 7955 IYQRDPLKL True NCI_RA007_Epitope_Rep5 1144.6604435631998 1144.65880490379 37.287 3 -0.07882245089644123 0.021163271092389323 0.24042670794417645 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 34788 18004 GQGEVLVYV True PC9_epitope_Rep6 962.5072969667398 962.50618993586 81.88 2 -0.07886665143405515 0.021163271092389323 0.2405539942653953 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 6465 13097 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37943496793 55.381 1 -0.07892714920836702 0.02118137820707531 0.240728264742229 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 103046 17747 SPFTVGVAA True PC9_epitope_Rep5 847.4439684341899 847.44341496793 73.282 1 -0.07893046317070854 0.02118137820707531 0.24073781271793268 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 102110 7147 SLRLDRVFHK True NCI_RA007_Epitope_Rep1 1269.73058881169 1269.72895490379 31.79 3 -0.07893341301134894 0.02118137820707531 0.24074631176184103 ['ENST00000380548.8_1_9:18770742-18777100:+|nuORF'] 137615 15625 YEFLTPVEEAP True H1975_Epitope_Rep3 1293.61288423409 1293.61178993586 65.518 2 -0.07893556564698481 0.02118137820707531 0.2407525139992001 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'ENSG00000111348|ENST00000228945|ARHGDIB'] 1701 8893 AEGMPPMQA True H1975_Epitope_Rep2 930.3939240906199 930.39282993586 39.178 2 -0.07896605525021186 0.02118137820707531 0.24084036974537873 ['nc|ENSG00000170265|Q9UDV7-2|ZNF282', 'ENSG00000170265|ENST00000610704|ZNF282'] 121019 13262 VEQESLLTAFR True NCI_RA007_Epitope_Rep2 1291.67721582615 1291.67610993586 56.222 2 -0.07903116348874795 0.021200340177378204 0.24102803029974287 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 117715 14859 TVVAQLKQL True PC9_epitope_Rep1 998.6124307416198 998.61132993586 61.975 2 -0.07903480923827721 0.021200340177378204 0.24103854045534784 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 103105 12463 SPHGIIVIA True PC9_epitope_Rep6 905.5334521449299 905.53234993586 59.365 2 -0.07906894972816914 0.021200340177378204 0.24113697304157505 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 34742 6071 GQEVNELKT True PC9_epitope_Rep1 1016.51383889916 1016.51274993586 28.166 2 -0.0791416300512253 0.021240407394658514 0.24134658607283557 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 83593 7478 PVCDQPECPK True NCI_RA007_Epitope_Rep5 1114.4787163437397 1114.47760993586 35.446 2 -0.0791965211271348 0.02125764262865935 0.24150495171399466 ['nc|ENSG00000174453|B2RUY7-2|VWC2L', 'ENSG00000174453|ENST00000312504|VWC2L'] 37036 9587 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 41.851 2 -0.07919989851544355 0.02125764262865935 0.24151469739557602 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 78370 12303 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 55.137 3 -0.07921183320604515 0.02125764262865935 0.24154913724933733 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 23882 15801 EYIRSLNQF True PC9_epitope_Rep2 1168.58767254576 1168.58656993586 66.038 2 -0.07922086084124527 0.02125764262865935 0.2415751897863253 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 6749 5107 AQDEERQASL True PC9_epitope_Rep5 1145.53127986845 1145.53018993586 24.67 2 -0.07922403046494345 0.02125764262865935 0.24158433720979383 ['ENSG00000184575|ENST00000332707|XPOT'] 56430 15966 LDEHGIAAAL True PC9_epitope_Rep6 1008.5240096600398 1008.52290993586 73.713 2 -0.07922529135936131 0.02125764262865935 0.24158797615294647 ['SBF1|p.R777Vfs*41|1|0.13|ENSG00000100241|chr22:50462257-50462272|GCTCCCGAAGTAGGCG/-|frameshift_variant', 'nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 73354 8945 MTEKQLNLY True H1975_Epitope_Rep2 1138.5692456002998 1138.5681499358602 39.365 2 -0.07922613373584059 0.02125764262865935 0.24159040726724482 ['ENSG00000167985|ENST00000301761|SDHAF2', 'SDHAF2|p.D106Y|1|0.36|ENSG00000256591|chr11:61438059-61438059|G/T|missense_variant', 'ENST00000536250.1_1_11:61204372-61205638:+|nuORF', 'ENSG00000256591|ENST00000541135|unknown'] 109318 15278 TAYDNFVEL True NCI_RA007_Epitope_Rep4 1070.49204082542 1070.49094993586 66.414 2 -0.07923268626119712 0.02127659574468085 0.2416093183756525 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 115097 17601 TRDELPYTF True PC9_epitope_Rep2 1140.54513902744 1140.5440499358601 72.98 2 -0.07923339160103633 0.02127659574468085 0.2416113540844205 ['nc|ENSG00000087269|P78316-2|NOP14', 'ENSG00000087269|ENST00000416614|NOP14'] 122094 17704 VGAANLPQV True PC9_epitope_Rep4 867.4814165720699 867.4808649679301 76.123 1 -0.07924088805661565 0.02127659574468085 0.2416329904010045 ['ENST00000550513.1_1_12:53689756-53691495:+|nuORF'] 99304 9484 SHSELIHNL True PC9_epitope_Rep1 1048.5301576696402 1048.5290699358602 41.337 2 -0.0792553268909774 0.021295977651369462 0.24167466645177607 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 47372 15242 IVIDPKNPL True PC9_epitope_Rep4 1007.60153170475 1007.60042993586 66.558 2 -0.07927286111502962 0.021295977651369462 0.24172528158914106 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 35706 20419 GTFDIFYTA True PC9_epitope_Rep6 1033.4756624852898 1033.47456993586 91.246 2 -0.07933473875913596 0.021314926521193475 0.2419039408535221 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 20954 13273 EQPETYYKW True PC9_epitope_Rep6 1242.5557037111398 1242.55460993586 62.706 2 -0.07934312565457459 0.021314926521193475 0.24192816115621918 ['ENSG00000164880|ENST00000404767|INTS1'] 52553 6487 KLFVGGLK True NCI_RA007_Epitope_Rep4 860.5483739330798 860.54726993586 31.55 2 -0.07936188544926583 0.021314926521193475 0.24198234126136028 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 132352 5648 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 27.11 2 -0.0794514144077079 0.021352817357512953 0.2422409888991279 ['ENSG00000160161|ENST00000291495|CILP2'] 57499 7059 LEDKYRYLFKQ True NCI_RA007_Epitope_Rep1 1501.79291428473 1501.79125490379 31.453 3 -0.07946032981723182 0.021352817357512953 0.24226675254259808 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-12|DMD', 'nc|ENSG00000198947|P11532-14|DMD', 'nc|ENSG00000198947|P11532-15|DMD', 'nc|ENSG00000198947|P11532-16|DMD', 'nc|ENSG00000198947|P11532-13|DMD', 'nc|ENSG00000198947|P11532-17|DMD', 'nc|ENSG00000198947|P11532-18|DMD', 'nc|ENSG00000198947|P11532-6|DMD', 'nc|ENSG00000198947|P11532-5|DMD', 'nc|ENSG00000198947|P11532-7|DMD', 'nc|ENSG00000198947|P11532-8|DMD', 'nc|ENSG00000198947|P11532-9|DMD'] 14528 10875 DTNADKQLSF True PC9_epitope_Rep6 1137.53021723929 1137.52912993586 52.693 2 -0.07946697126856195 0.021352817357512953 0.24228594577337173 ['ENSG00000163220|ENST00000368738|S100A9'] 132135 19616 VTVFGYSIVI True PC9_epitope_Rep5 1096.61684741572 1096.61574993586 80.506 2 -0.0794972004005395 0.021352817357512953 0.24237331450644775 ['TECTA|p.D2032Ifs*79|1|0.16|ENSG00000109927|chr11:121187923-121187923|G/-|frameshift_variant', 'ENSG00000109927|ENST00000392793|TECTA'] 114834 6986 TQLQTTQSV True PC9_epitope_Rep6 1004.5138388991599 1004.51274993586 35.846 2 -0.07949730050253737 0.021352817357512953 0.24237360384768541 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 110965 20148 THALEWPSL True PC9_epitope_Rep5 1052.52909504048 1052.5279899358602 82.547 2 -0.07959751193309111 0.021352817357512953 0.24266334345895318 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 52855 7486 KPAVNQIEC True PC9_epitope_Rep5 1000.5011660404799 1000.50006993586 33.745 2 -0.07963017872541572 0.021371759324846695 0.24275782781635694 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF'] 70667 26936 LWHIWRERN True PC9_epitope_Rep5 1308.68397297244 1308.68233490379 110.08 3 -0.07963909341005487 0.021371759324846695 0.24278361538005877 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 133437 6918 VVWQRRHAR True NCI_RA007_Epitope_Rep4 1206.68464167878 1206.6829949037901 33.229 3 -0.07964648357690259 0.021371759324846695 0.24280499394400565 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 49222 4170 KENPVVVA True NCI_RA007_Epitope_Rep5 854.4861675993399 854.48506993586 22.561 2 -0.07966393155301918 0.02139113188836946 0.2428554716649605 ['ENSG00000107372|ENST00000376962|ZFAND5'] 30190 14942 FYQPKIQQF True PC9_epitope_Rep6 1197.61824439805 1197.6171499358602 69.478 2 -0.07967656168926363 0.02139113188836946 0.2428920142708977 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 42423 15066 IEDPLIVTP True H1975_Epitope_Rep2 995.55391280599 995.5533649679301 63.102 1 -0.0797783549296356 0.02141093617193508 0.24318662618740927 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 26700 21429 FIVEETLPL True PC9_epitope_Rep4 1059.58521293427 1059.5841099358602 90.602 2 -0.07978671859883833 0.02143073965395123 0.24321083997817453 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 5831 9595 APFAAHGYGA True PC9_epitope_Rep5 960.4453654165198 960.44426993586 41.869 2 -0.07989520150619717 0.021450108262338872 0.2435250136786786 ['ENSG00000126067|ENST00000373237|PSMB2'] 71291 17915 LYQDGVFKF True PC9_epitope_Rep6 1115.56514619603 1115.56404993586 81.535 2 -0.0798956931928615 0.021450108262338872 0.24352643807159974 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 70401 21510 LVTGYFMQV True PC9_epitope_Rep2 1056.5314035396 1056.53030993586 88.206 2 -0.07997520727498064 0.021490145291189446 0.24375683828435904 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'ENST00000508032.5_1_4:24529549-24538851:-|nuORF', 'ENST00000508368.1_1_4:24529637-24534570:-|nuORF', 'ENST00000510645.5_1_4:24519211-24534570:-|nuORF', 'ENST00000512903.1_1_4:24529549-24534804:-|nuORF'] 127302 12808 VMDSKIVQV True PC9_epitope_Rep3 1017.5528672601698 1017.55176993586 54.287 2 -0.08007774940762555 0.021507769504694074 0.2440541162224264 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 87189 21989 QPILLELEA True PC9_epitope_Rep1 1024.580461907 1024.57936993586 89.402 2 -0.08008563049189209 0.021507769504694074 0.2440769711844207 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 102827 14954 SNPVDILTY True H1975_Epitope_Rep3 1020.5127762699999 1020.51166993586 62.908 2 -0.08009317229581747 0.021507769504694074 0.24409884318461786 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 46767 22689 ITFDEIVNI True PC9_epitope_Rep2 1062.55972646242 1062.5586299358602 92.767 2 -0.08011070722543867 0.021507769504694074 0.24414969983374932 ['ENSG00000197958|ENST00000361436|RPL12', 'nc|ENSG00000197958|P30050-2|RPL12'] 95814 10249 RYIPTAAAF True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.5386749679301 46.277 1 -0.08014330135138305 0.021507769504694074 0.2442442459961671 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 67826 15949 LTAGDYIYI True H1975_Epitope_Rep2 1027.52261267771 1027.52207496793 66.546 1 -0.080145846672259 0.021507769504694074 0.2442516299631794 ['ENSG00000275793|ENST00000619918|RIMBP3', 'RIMBP3|p.Q1152Sfs*13|1|0.07|ENSG00000275793|chr22:18607981-18607981|G/-|frameshift_variant', 'ENSG00000274600|ENST00000620804|RIMBP3B', 'ENSG00000183246|ENST00000433039|RIMBP3C'] 78928 14297 PAGSFLLT True H1975_Epitope_Rep2 804.43815477776 804.43704993586 60.144 2 -0.08019924298219168 0.021525389439611572 0.24440655667621325 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 31523 5827 GEDIRKQLP True H1975_Epitope_Rep2 1054.5771078620598 1054.5760099358602 27.404 2 -0.08020293567788819 0.021525389439611572 0.24441727255518192 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7674005-7689702:+|nuORF'] 73659 24445 MYIIPVVLF True PC9_epitope_Rep2 1093.6245756484498 1093.6234699358602 99.601 2 -0.08020333270789147 0.021525389439611572 0.24441842471457262 ['ENSG00000161671|ENST00000334976|EMC10'] 85443 10159 QEYPTLKVP True NCI_RA007_Epitope_Rep3 1073.57571087973 1073.57460993586 47.049 2 -0.08023046763831862 0.021525389439611572 0.24449717485089942 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 106757 6994 STYRDFQQA True PC9_epitope_Rep2 1114.50433684462 1114.5032299358602 32.299 2 -0.0802400734062931 0.021525389439611572 0.2445250552642756 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.S39G|1|0.41|ENSG00000125676|chrX:123712865-123712865|T/C|missense_variant'] 118415 13740 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47107496793 60.748 1 -0.08024398197428849 0.021525389439611572 0.2445364001769715 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 122225 11236 VGAPKIPSV True PC9_epitope_Rep6 866.5225531080599 866.52144993586 54.216 2 -0.08026681425979991 0.021544312503793014 0.24460267754569226 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 35427 18040 GSFGSNFVSA True PC9_epitope_Rep5 971.4348603024699 971.43376993586 74.406 2 -0.08032283353723507 0.021544312503793014 0.24476532558185826 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 137439 6121 YEDGGKPPVP True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 28.523 2 -0.08032652481002646 0.021544312503793014 0.24477604471596906 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 75614 7138 NLDSARFRY True H1975_Epitope_Rep2 1140.5676058075198 1140.56596490379 32.389 3 -0.08036280698075408 0.021561924796213515 0.24488141670142222 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 45290 19007 IPVYSPLSA True PC9_epitope_Rep4 945.5171333744499 945.51602993586 81.201 2 -0.08037094064018267 0.021561924796213515 0.24490504168837735 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF'] 32799 16502 GHFNSMVAL True PC9_epitope_Rep5 974.4643866089399 974.46328993586 68.473 2 -0.08037861905381986 0.021561924796213515 0.2449273453520107 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 15697 12513 EAVRGSVVL True PC9_epitope_Rep4 928.5341804209198 928.53308993586 55.949 2 -0.08043325618624225 0.021561924796213515 0.24508607859202713 ['ENSG00000147251|ENST00000276202|DOCK11'] 35041 11045 GQVGGEINV True PC9_epitope_Rep6 871.43994568291 871.43884993586 53.395 2 -0.08044123593682437 0.021561924796213515 0.24510926561064192 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 23918 10421 EYLDRAEKL True PC9_epitope_Rep5 1135.5873381925899 1135.58569490379 45.069 3 -0.0804484602484396 0.021561924796213515 0.24513025841295957 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B'] 75027 6962 NHSEGSTTLL True PC9_epitope_Rep4 1057.5040024914501 1057.50290993586 34.017 2 -0.08049362352312973 0.021580405719717654 0.24526151544582317 ['nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-11|CD44', 'nc|ENSG00000026508|P16070-10|CD44', 'nc|ENSG00000026508|P16070-4|CD44'] 48079 5025 IYNEIAGK True NCI_RA007_Epitope_Rep3 906.4810822188999 906.47998993586 26.76 2 -0.0804947151119206 0.021580405719717654 0.24526468831393022 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 85205 8938 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57797496793 39.285 1 -0.080495680414807 0.021580405719717654 0.245267494128959 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 68946 9314 LTPEEEEILNK True NCI_RA007_Epitope_Rep5 1313.6714617393698 1313.6703699358602 42.47 2 -0.08052381590016616 0.021580405719717654 0.24534928125188565 ['ENSG00000142937|ENST00000396651|RPS8'] 122461 21799 VGEEFQIVL True PC9_epitope_Rep3 1032.5491617787197 1032.5480699358602 89.148 2 -0.08058617243204755 0.02161954455365449 0.24553059115344772 ['nc|ENSG00000163297|P58335|ANTXR2', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335-3|ANTXR2'] 104258 5796 SQIDQQNSV True PC9_epitope_Rep4 1017.4727023631701 1017.47160993586 29.148 2 -0.08058848793231793 0.02161954455365449 0.24553732498571804 ['ENSG00000121931|ENST00000369763|LRIF1'] 29170 10203 FTQGHIVEV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 49.888 2 -0.08061071685830531 0.02161954455365449 0.2456019745325648 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 93087 11039 RPNGVITGLAA True PC9_epitope_Rep4 1067.60874234351 1067.60764993586 50.237 2 -0.08065390193051757 0.02163714308824719 0.24572759470063626 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1', 'nc|ENSG00000122068|Q96QD9-4|FYTTD1'] 293 15759 AAGTVFTTV True PC9_epitope_Rep4 865.4545331178899 865.45342993586 68.54 2 -0.0806595186409131 0.02163714308824719 0.2457439352423698 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 7953 5456 ATATVAALQEK True NCI_RA007_Epitope_Rep3 1101.6029882567298 1101.60188993586 28.471 2 -0.08067308967336782 0.02163714308824719 0.24578341917288815 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 49900 16963 KIIDIFTTL True NCI_RA007_Epitope_Rep5 1062.6324974798601 1062.6314099358601 72.008 2 -0.08068888115960636 0.02163714308824719 0.2458293670862924 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 67717 19416 LSWRLCFNQVL True PC9_epitope_Rep5 1377.72272654993 1377.7216299358602 79.732 2 -0.08069016717229606 0.02163714308824719 0.24583310912751508 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 49485 10345 KFDQLLAEEK True PC9_epitope_Rep2 1219.6448530687096 1219.6437499358601 45.118 2 -0.08069156798068047 0.02163714308824719 0.24583718523168985 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 72852 6058 MPNGTPHPTAA True PC9_epitope_Rep5 1092.50222866964 1092.50112993586 28.293 2 -0.08074375832211714 0.021656488858332996 0.2459890723934785 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 109104 17590 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.57388993586 72.669 2 -0.08075160240603396 0.021656488858332996 0.24601190446195775 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 102993 16401 SPFGTITSA True PC9_epitope_Rep2 879.43379767331 879.43324496793 68.331 1 -0.08084951267162452 0.02167627135780002 0.2462969788182088 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 15910 16571 EDLDQLENVP True H1975_Epitope_Rep2 1170.5404475698201 1170.5393499358602 68.968 2 -0.08087095627878697 0.02169517570463828 0.24635943434321167 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'ENST00000431180.5_1_3:47122459-47155398:-|nuORF'] 31435 11444 GEAIPALAA True H1975_Epitope_Rep2 811.44396843419 811.44286993586 49.072 2 -0.08091689906940779 0.02169517570463828 0.24649326977653155 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 39885 6330 HPEPASGLAA True PC9_epitope_Rep5 948.4664947839199 948.46538993586 29.323 2 -0.08095055730508367 0.02169517570463828 0.2465913407249844 ['ENSG00000169710|ENST00000306749|FASN'] 33869 12270 GLPRELAEA True PC9_epitope_Rep5 954.5134449763399 954.51234993586 52.185 2 -0.08114847854251314 0.021733416897478923 0.2471683970697689 ['ENSG00000126261|ENST00000246548|UBA2'] 8367 17906 ATLLDKAVL True PC9_epitope_Rep3 942.57498260374 942.57388993586 74.078 2 -0.08115250305365962 0.021733416897478923 0.24718013739043015 ['ENSG00000158445|ENST00000371741|KCNB1', 'KCNB1|p.P721T|1|0.29|ENSG00000158445|chr20:49373399-49373399|G/T|missense_variant'] 140267 14881 YRAPELVL True PC9_epitope_Rep4 959.5440168286299 959.54346496793 65.177 1 -0.08116617295830826 0.021733416897478923 0.2472200172298774 ['nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 40246 4829 HQISQQTQL True NCI_RA007_Epitope_Rep4 1081.55162139021 1081.5505299358601 25.009 2 -0.08122376132948314 0.021733416897478923 0.24738805527257823 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1', 'RC3H1|p.G985E|1|0.06|ENSG00000135870|chr1:173946483-173946483|C/T|missense_variant'] 141508 19277 YTLDGGDIINA True PC9_epitope_Rep4 1150.5506183307 1150.5495299358602 82.254 2 -0.08124669771343583 0.021733416897478923 0.24745499649772437 ['ENSG00000204628|ENST00000512805|RACK1'] 132836 16820 VVLGIRPIRL True PC9_epitope_Rep4 1134.76009803482 1134.7584449037902 72.67 3 -0.0813598238198622 0.021753194242277212 0.24778528495092714 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 136952 11288 YAGSGNVL True PC9_epitope_Rep3 779.38136817763 779.3808149679301 48.425 1 -0.08142244107226086 0.021772970787425454 0.2479681932220713 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 8977 12776 AVGKIFSNV True PC9_epitope_Rep2 933.52836676449 933.52726993586 54.447 2 -0.08145408061438764 0.021792746532972144 0.2480606377843014 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 85873 15173 QHFDSVMQL True PC9_epitope_Rep6 1103.5069796969099 1103.50588993586 70.439 2 -0.08165014805922889 0.02185295247336608 0.24863386449673539 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 73548 5669 MVRCDAAVGT True PC9_epitope_Rep5 1021.4684860132098 1021.46738993586 26.803 2 -0.08170891291614012 0.02189072827602935 0.2488057898578808 ['ROCK1|p.T233A|1|0.26|ENSG00000067900|chr18:21042688-21042688|T/C|missense_variant'] 39975 9654 HPLLGVSA True PC9_epitope_Rep4 792.4493881678001 792.44828993586 44.759 2 -0.08171083920054803 0.02189072827602935 0.2488114264204226 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 22164 9863 ESSNETIYY True H1975_Epitope_Rep3 1104.46113461996 1104.4600299358601 42.968 2 -0.08172717484943222 0.02189072827602935 0.248859229058424 ['BRINP2|p.D655E|1|0.34|ENSG00000198797|chr1:177281141-177281141|C/G|missense_variant'] 96020 19011 RYLPKGFLNQF True PC9_epitope_Rep2 1381.7506555499297 1381.7495499358602 78.491 2 -0.08172933663800648 0.02189072827602935 0.24886555536914462 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 130545 13729 VSREGSLAL True PC9_epitope_Rep3 930.5134449763399 930.51234993586 57.892 2 -0.08173685210750532 0.02189072827602935 0.24888754940031232 ['ENST00000545251.6_1_1:175130158-175130197:-|nuORF'] 38459 9005 HEPEPHIL True PC9_epitope_Rep3 970.4872302285 970.48612993586 39.582 2 -0.08174155837458039 0.02189072827602935 0.24890132275424529 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 42505 15826 IEEKIVDNL True PC9_epitope_Rep1 1071.58119018299 1071.58008993586 65.688 2 -0.08177555990921075 0.021910055583628095 0.24900084205407494 ['nc|ENSG00000127125|Q9HAB8-2|PPCS', 'ENSG00000127125|ENST00000372561|PPCS'] 70650 25880 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 105.32 3 -0.08179948100470483 0.021910055583628095 0.24907086786529026 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 7179 8321 AQYEEMAKC True PC9_epitope_Rep1 1071.4365171785898 1071.4354099358602 36.84 2 -0.08184877281415226 0.02192805173807599 0.24921519171649845 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 84260 10873 PYNHRMKKYL True NCI_RA007_Epitope_Rep2 1348.70741083896 1348.7063099358602 46.899 2 -0.08185613215861814 0.02192805173807599 0.24923674280428026 ['ENSG00000100412|ENST00000216254|ACO2', 'ENST00000466237.1_1_22:41911770-41917430:+|nuORF'] 77308 10698 NSDPGLAVGY True H1975_Epitope_Rep3 991.46107505031 991.45996993586 46.226 2 -0.08186405801808541 0.02192805173807599 0.24925995383501123 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 39159 6549 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.5406899358602 33.872 2 -0.08188804782508974 0.02192805173807599 0.2493302145195698 ['ENSG00000156482|ENST00000287038|RPL30'] 86025 7856 QHQETINTL True PC9_epitope_Rep1 1082.5356369729 1082.53452993586 35.045 2 -0.08192510695380689 0.02192805173807599 0.24943877022414157 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 119918 9769 VDLGVLGK True H1975_Epitope_Rep3 799.4803539429099 799.47924993586 42.6 2 -0.08194543782163353 0.021947374802958653 0.24949833381168107 ['ENSG00000079739|ENST00000371084|PGM1', 'nc|ENSG00000079739|P36871-2|PGM1'] 13646 5485 DPNRDVISP True H1975_Epitope_Rep2 1011.4985231881899 1011.4974299358599 26.112 2 -0.08198674455307114 0.021947374802958653 0.24961937082531038 ['ENST00000553883.1_1_14:94401004-94406176:-|nuORF', 'nc|ENSG00000100628|Q96Q27-1|ASB2', 'ENSG00000100628|ENST00000555019|ASB2'] 103115 6924 SPHLGPAPA True PC9_epitope_Rep5 845.4395517600899 845.43844993586 31.603 2 -0.08203586864856341 0.021967140229977974 0.24976334948993786 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 14414 8002 DTDPSIYR True H1975_Epitope_Rep2 965.4454249861699 965.44432993586 35.727 2 -0.08208384448909606 0.021985127707727127 0.24990399961088725 ['nc|ENSG00000196364|A6NIE9|PRSS29P'] 20310 19711 ENTLQLVRNI True PC9_epitope_Rep3 1198.6669854956199 1198.6658899358602 81.048 2 -0.08208818495932543 0.021985127707727127 0.2499167263063627 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 43559 13601 IGRSSELAV True PC9_epitope_Rep2 930.5134449763399 930.51234993586 57.604 2 -0.08209202501256843 0.021985127707727127 0.24992798597752341 ['ENSG00000226763|ENST00000417606|SRRM5'] 78372 14613 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.60641490379 61.209 3 -0.08216530696066797 0.021985127707727127 0.2501429054869129 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 508 6637 AAPAEEPAAAA True PC9_epitope_Rep5 967.4610750503098 967.45996993586 30.503 2 -0.0821785326107279 0.021985127707727127 0.2501817024000944 ['ENSG00000277443|ENST00000612661|MARCKS'] 91935 5702 RKMAQAVTL True NCI_RA007_Epitope_Rep4 1016.5800850675199 1016.57898993586 28.546 2 -0.08220261016758995 0.022003111551128444 0.2502523400467164 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'ENST00000488127.1_1_1:25880414-25890333:+|nuORF'] 24591 21031 FAIDPHLLL True PC9_epitope_Rep4 1037.59096702105 1037.5898699358602 89.058 2 -0.08222828389932277 0.022003111551128444 0.25032767057435257 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 24623 22836 FAISILQQL True PC9_epitope_Rep2 1031.60153170475 1031.60097496793 93.328 1 -0.08224450533796508 0.022003111551128444 0.2503752720453537 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 40335 11920 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5445349679301 53.633 1 -0.08224581118312906 0.022003111551128444 0.2503791042013774 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 9540 19414 AVYGPELYAA True PC9_epitope_Rep1 1052.51786165044 1052.51676993586 79.486 2 -0.08225144138979897 0.022003111551128444 0.2503956270126775 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000100320|O43251-4|RBFOX2', 'nc|ENSG00000100320|O43251-9|RBFOX2'] 107494 2611 SVNGKVLSK True NCI_RA007_Epitope_Rep3 930.5498304850599 930.54872993586 14.737 2 -0.08226287757309919 0.022062388879909488 0.25042919000412767 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 57086 16802 LDSLSDENETL True PC9_epitope_Rep2 1234.55649155678 1234.5553899358601 69.875 2 -0.0823246667032762 0.022062388879909488 0.2506105649054282 ['ARMC7|p.E68D|1|0.43|ENSG00000125449|chr17:75110575-75110575|G/T|missense_variant'] 35102 7738 GQVPPGESV True PC9_epitope_Rep5 868.42904664604 868.4279499358599 34.705 2 -0.08234658207105501 0.022062388879909488 0.25067490943162124 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 78489 7562 NYNNQSSNF True PC9_epitope_Rep4 1086.4366512076201 1086.43554993586 36.464 2 -0.0823752509345346 0.02208080808080808 0.25075909397214247 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 26376 7678 FHTTPNTSL True PC9_epitope_Rep6 1016.49270953176 1016.49160993586 38.86 2 -0.08240062354732008 0.02208080808080808 0.25083361006778193 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 72877 7419 MPRQLSAAAA True PC9_epitope_Rep2 1014.5280494946599 1014.52694993586 33.913 2 -0.0824240375431327 0.02208080808080808 0.25090238296352885 ['ENSG00000078081|ENST00000265598|LAMP3'] 113898 16473 TNQIYTNEI True PC9_epitope_Rep1 1094.52440358286 1094.5233099358602 68.189 2 -0.08242486951779077 0.02208080808080808 0.25090482684494925 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 131217 16674 VTERNLLEV True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 72.113 2 -0.08245411323787795 0.022099670727026646 0.25099073565248253 ['VPS45|p.S343T|1|0.11|ENSG00000136631|chr1:150082807-150082807|G/C|missense_variant'] 21731 7273 ERTIHTDVL True PC9_epitope_Rep2 1082.57202248162 1082.57092993586 33.363 2 -0.0824715835304136 0.022099670727026646 0.25104206428084 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF', 'ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33'] 45370 9901 IQDNKFIEA True PC9_epitope_Rep4 1076.55022440788 1076.54912993586 45.736 2 -0.08249254810154379 0.022099670727026646 0.2511036656283688 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 118100 18418 TYGKIDLGF True PC9_epitope_Rep4 1012.5229470308799 1012.52184993586 78.912 2 -0.08253726945495539 0.022119424692954106 0.2512350959607376 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 124861 16029 VHLETILGA True PC9_epitope_Rep2 951.5389314481898 951.53782993586 66.91 2 -0.08257554783269085 0.022137836309283346 0.25134761621782936 ['ENSG00000165591|ENST00000374900|FAAH2'] 92750 7452 RPAAGFVA True PC9_epitope_Rep3 787.4340724568299 787.43296993586 33.668 2 -0.08261109958334077 0.022137836309283346 0.2514521421338716 ['ENSG00000141526|ENST00000582743|SLC16A3'] 8464 8100 ATQMVRMILK True NCI_RA007_Epitope_Rep3 1189.6675201729297 1189.6658849037901 38.962 3 -0.08261254077954577 0.022137836309283346 0.25145637982277125 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 139584 23347 YLVYILNEL True PC9_epitope_Rep2 1138.6274120994199 1138.62687496793 95.279 1 -0.08261915925727578 0.022137836309283346 0.2514758411937951 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 7036 5823 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep4 935.4348606187698 935.43376993586 29.023 2 -0.082672887728101 0.022156692452182342 0.2516338531158438 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 4322 19436 AIIQCEVV True PC9_epitope_Rep5 873.4629896266099 873.46188993586 79.811 2 -0.08268256360618689 0.022156692452182342 0.2516623140619914 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 78342 15233 NYKDLNGNVF True PC9_epitope_Rep1 1182.5669371011797 1182.5658499358601 63.414 2 -0.0826832103218509 0.022156692452182342 0.25166421638516806 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 43574 4993 IGSGC[Carbamidomethyl]NLDSAR True NCI_RA007_Epitope_Rep2 1148.5244209456298 1148.5233299358601 24.046 2 -0.08272522673843118 0.02218767665347654 0.25178782234173974 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 53081 2547 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 14.717 2 -0.08273047019959234 0.02218767665347654 0.251803249759075 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 6099 23197 APLVTLEVL True PC9_epitope_Rep3 953.57973363101 953.57918496793 94.496 1 -0.08274373686169646 0.02218767665347654 0.25184228512813384 ['ENSG00000125872|ENST00000378858|LRRN4'] 29437 16516 FVEEEEHFL True PC9_epitope_Rep4 1177.52915461013 1177.52804993586 71.501 2 -0.08275393978588275 0.02218767665347654 0.25187230774006564 ['ENSG00000168159|ENST00000305943|RNF187'] 44337 12186 ILDQKINEV True PC9_epitope_Rep3 1070.5971746003 1070.5960699358602 51.908 2 -0.08276363839980716 0.02218767665347654 0.2519008479088709 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 17756 12502 EHSGPPIVI True PC9_epitope_Rep4 947.5076313199099 947.50652993586 55.901 2 -0.08278857303039339 0.02218767665347654 0.25197422997085117 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 8563 15039 ATVLQAVSA True PC9_epitope_Rep2 858.4810822188999 858.47998993586 63.103 2 -0.08282939399566629 0.02218767665347654 0.25209438621794134 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 57651 13236 LEEELKTFKRI True NCI_RA007_Epitope_Rep1 1404.7976653119997 1404.7965699358601 55.484 2 -0.08285365727755178 0.02218767665347654 0.25216581741406163 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 35074 7837 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42883496793 39.54 1 -0.08298275998084621 0.02218767665347654 0.2525460514055314 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 105150 16516 SRFPEALRL True PC9_epitope_Rep3 1087.61382772395 1087.6127299358602 68.665 2 -0.08299002715371732 0.02218767665347654 0.2525674624822657 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 133440 9757 VVWQRRHAR True PC9_epitope_Rep5 1206.68464167878 1206.6829949037901 42.5 3 -0.08303475779556148 0.02218767665347654 0.2526992693704004 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 142294 8870 YYDKHFTEF True NCI_RA007_Epitope_Rep5 1248.54513902744 1248.5440499358601 40.783 2 -0.08305246680514976 0.02218767665347654 0.2527514608030412 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 115113 11356 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 48.56 2 -0.08305458835130695 0.02218767665347654 0.2527577136856891 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 45873 17613 ISDRTDALLL True PC9_epitope_Rep4 1115.6186383208699 1115.61754993586 75.766 2 -0.08306335007986194 0.02218767665347654 0.25278353807883214 ['nc|ENSG00000142197|Q9Y3R5-2|DOP1B', 'ENSG00000142197|ENST00000691173|DOP1B'] 59469 11884 LFQEREHVLRL True PC9_epitope_Rep6 1438.80448202794 1438.80283490379 56.939 3 -0.08314155044191465 0.02218767665347654 0.2530140796350059 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 97857 12449 SELPIVTPA True H1975_Epitope_Rep3 925.51204799401 925.51149496793 53.077 1 -0.08315741961542467 0.02218767665347654 0.2530608750174122 ['ENSG00000182481|ENST00000330459|KPNA2'] 139534 21374 YLTDIALSL True PC9_epitope_Rep3 1007.55391280599 1007.55280993586 87.514 2 -0.08317165948394803 0.02218767665347654 0.25310286921551683 ['FASTKD2|p.R556T|1|0.22|ENSG00000118246|chr2:206788009-206788009|G/C|missense_variant'] 97858 12537 SELPIVTPA True H1975_Epitope_Rep3 925.51204799401 925.51149496793 53.423 1 -0.08320443679828933 0.02218767665347654 0.25319954344564416 ['ENSG00000182481|ENST00000330459|KPNA2'] 134350 8195 VYPEKLATKF True NCI_RA007_Epitope_Rep4 1194.6648602372995 1194.66322490379 38.31 3 -0.08320616500046296 0.02218767665347654 0.25320464111369956 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 5892 7593 APGIPRKD True PC9_epitope_Rep5 852.4817509252399 852.48064993586 34.156 2 -0.08324615718316124 0.02218767665347654 0.2533226188426501 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 33868 10766 GLPRELAEA True PC9_epitope_Rep4 954.5134449763399 954.51234993586 49.17 2 -0.08324746661995082 0.02218767665347654 0.25332648212888403 ['ENSG00000126261|ENST00000246548|UBA2'] 130914 11660 VTDELPLP True H1975_Epitope_Rep2 882.4698488288599 882.46930496793 49.922 1 -0.08336848084022286 0.022245099820343568 0.25368363083535445 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1'] 130198 18471 VSEPRYFQL True PC9_epitope_Rep1 1137.5818588893299 1137.5807699358602 75.841 2 -0.08337278869116713 0.022245099820343568 0.2536963487815299 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 85177 18185 QENVDTILV True PC9_epitope_Rep6 1029.5342399905699 1029.5331499358601 82.589 2 -0.08340162634178966 0.022245099820343568 0.2537814928008095 ['ENSG00000089775|ENST00000608382|ZBTB25'] 110992 4819 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 26.026 2 -0.08340735906043284 0.022245099820343568 0.25379842036531136 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 90546 4320 REMDQTMAA True NCI_RA007_Epitope_Rep3 1051.44266518819 1051.4415699358601 23.732 2 -0.08349605650152653 0.022245099820343568 0.25406039121775853 ['ENST00000371870.3_1_1:47799617-47838812:+|nuORF', 'nc|ENSG00000162368|P30085|CMPK1', 'ENSG00000162368|ENST00000371873|CMPK1'] 54125 16186 KVPEIEVTV True PC9_epitope_Rep5 1012.5804619069999 1012.57936993586 67.248 2 -0.08351597921583913 0.022245099820343568 0.2541192504457237 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 132363 6832 VVAAHLAGA True PC9_epitope_Rep5 807.46028720467 807.45918993586 31.251 2 -0.08352805781097912 0.022245099820343568 0.254154938184829 ['ENSG00000160161|ENST00000291495|CILP2'] 134793 20055 VYTVVDEMF True PC9_epitope_Rep6 1101.5052483614097 1101.50467496793 89.808 1 -0.08359071434937113 0.022277827104689642 0.25434010123875195 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 117185 9346 TVLERVEGA True PC9_epitope_Rep4 972.5240096600398 972.52290993586 43.556 2 -0.08359293056453057 0.022277827104689642 0.25434665173023957 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 133613 16055 VYADQPHIF True PC9_epitope_Rep1 1088.52909504048 1088.5279899358602 66.569 2 -0.0836010577762608 0.022277827104689642 0.2543706740718025 ['ENSG00000100439|ENST00000428304|ABHD4'] 40115 18793 HPYLFPVA True PC9_epitope_Rep5 942.4963383602199 942.49524993586 77.3 2 -0.08366148831362186 0.022277827104689642 0.25454932627949023 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 34578 12991 GPSVFLFPPK True NCI_RA007_Epitope_Rep5 1087.6066170851898 1087.6055299358602 56.648 2 -0.08366437671036647 0.022277827104689642 0.254557866733088 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 40592 13514 HRHPDAFYL True PC9_epitope_Rep5 1154.5621265042598 1154.56048490379 57.002 3 -0.0836660893810293 0.022277827104689642 0.2545629308437873 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1', 'nc|ENSG00000187778|Q96EZ8-4|MCRS1'] 137899 12138 YEWVNPAA True H1975_Epitope_Rep2 948.4341320264798 948.43302993586 51.773 2 -0.08369947488068986 0.022277827104689642 0.25466165585395817 ['ENSG00000092148|ENST00000399332|HECTD1'] 63954 8546 LNSVVQSV True PC9_epitope_Rep4 844.4654321547599 844.46432993586 40.351 2 -0.08370881810807723 0.022277827104689642 0.25468928801657403 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 5712 21372 APALLLIPAA True PC9_epitope_Rep4 948.60080342876 948.60025496793 90.376 1 -0.08370962559255897 0.022277827104689642 0.2546916761780974 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 2681 9765 AESPSWTP True H1975_Epitope_Rep3 873.38684748089 873.3862949679301 42.585 1 -0.08371326952175528 0.022277827104689642 0.25470245334251634 ['ENSG00000085840|ENST00000371568|ORC1'] 110528 22646 TFLDDSGSLNW True PC9_epitope_Rep5 1253.5564319871298 1253.55532993586 92.108 2 -0.08382072496805305 0.022277827104689642 0.25502035250512073 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 26265 12657 FHESGFTTV True PC9_epitope_Rep5 1023.4661604307499 1023.46506993586 53.689 2 -0.08385026661059973 0.022277827104689642 0.2551077806521332 ['ARAP2|p.P1501Qfs*6|1|1.0|ENSG00000047365|chr4:36083374-36083374|G/-|frameshift_variant', 'ENSG00000047365|ENST00000303965|ARAP2', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 85039 12277 QEIATVVVP True NCI_RA007_Epitope_Rep3 954.5385970950199 954.53750993586 55.453 2 -0.08386263654192223 0.022277827104689642 0.2551443933312253 ['ENSG00000139233|ENST00000266604|LLPH'] 6263 4188 APRAGAGMAAA True PC9_epitope_Rep5 942.4705346185398 942.46942993586 21.182 2 -0.08387597791605321 0.022277827104689642 0.2551838839525035 ['ENST00000375344.7_1_9:97136898-97137102:+|nuORF'] 125493 10062 VIYPYVYEK True NCI_RA007_Epitope_Rep5 1172.6117620352795 1172.6106699358602 45.342 2 -0.0838823699637778 0.022277827104689642 0.2552028054630809 ['STEAP4|p.F357Nfs*35|1|0.06|ENSG00000127954|chr7:88280996-88280997|-/TGTTG|frameshift_variant', 'ENSG00000127954|ENST00000380079|STEAP4'] 2255 6097 AENPKLISA True NCI_RA007_Epitope_Rep4 941.5181960036099 941.51708993586 30.067 2 -0.08388878626659098 0.022277827104689642 0.255221799408263 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 136344 15357 WTDLALQY True H1975_Epitope_Rep2 1008.4916469026 1008.4910749679301 64.23 1 -0.08389322631499632 0.022277827104689642 0.2552349434929718 ['ENSG00000129055|ENST00000354910|ANAPC13'] 8565 15380 ATVLQAVSA True PC9_epitope_Rep5 858.4810822188999 858.47998993586 64.168 2 -0.08391942096224253 0.022293507646370496 0.2553124949470932 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 79882 15032 PELQIYQL True NCI_RA007_Epitope_Rep4 1002.5385970950199 1002.53750993586 65.335 2 -0.08394411081684772 0.022293507646370496 0.25538560104733715 ['ENST00000585421.5_1_17:76850481-76850583:-|nuORF'] 108810 4516 SYTSHTNEI True NCI_RA007_Epitope_Rep5 1050.4618033263002 1050.4607099358602 24.024 2 -0.08399148109032133 0.022293507646370496 0.25552588972829055 ['ENSG00000112936|ENST00000313164|C7'] 59101 4652 LEYGDNAEK True PC9_epitope_Rep3 1037.4665543535698 1037.46544993586 22.987 2 -0.08399798930127213 0.022293507646370496 0.25554516672539057 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000507713.1_1_5:94775848-94776172:+|nuORF'] 139845 6470 YPNSGSVSA True PC9_epitope_Rep4 880.39266113732 880.3921149679301 32.0 1 -0.08403142517780253 0.022293507646370496 0.25564421243998914 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 76349 19927 NPVTGLLSA True PC9_epitope_Rep1 870.4810822189 870.47998993586 81.468 2 -0.08405419627037827 0.022293507646370496 0.2557116761849482 ['ENSG00000044446|ENST00000379942|PHKA2', 'PHKA2|p.Q1025Pfs*38|1|0.65|ENSG00000044446|chrX:18899215-18899216|-/A|frameshift_variant'] 38417 14228 HENILGFIA True H1975_Epitope_Rep1 1012.5341804209199 1012.53308993586 59.907 2 -0.08405874914760138 0.022293507646370496 0.2557251659200515 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'ENSG00000107779|ENST00000372037|BMPR1A', 'ENSG00000115170|ENST00000434821|ACVR1', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 116394 18346 TTIGDITLS True PC9_epitope_Rep4 919.4862271689901 919.48512993586 78.635 2 -0.08406781853109678 0.022293507646370496 0.25575203857982504 ['ENST00000462363.6_1_1:198608398-198672548:+|nuORF'] 85693 6797 QGVLNDRLAT True H1975_Epitope_Rep3 1085.58292151849 1085.58182993586 31.098 2 -0.08408531226487126 0.022293507646370496 0.2558038762451758 ['ENST00000247295.4_1_9:134133967-134134456:-|nuORF'] 77688 10718 NTIMDLQTQLK True H1975_Epitope_Rep3 1303.6805869544298 1303.6794899358601 46.303 2 -0.08409188278230117 0.022293507646370496 0.2558233473096342 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'ERC1-VWF|2|fusion', 'ERC1-VWF|1|fusion'] 21826 11357 ESAFRKLDELY True H1975_Epitope_Rep2 1369.6877805098497 1369.68613490379 48.733 3 -0.08410316285238034 0.022313232594266347 0.2558567762102817 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF'] 6676 21655 APYPGFLSV True PC9_epitope_Rep1 949.49091862661 949.48982993586 88.125 2 -0.08411180494469461 0.022332506203473945 0.2558823886948166 ['ENSG00000160447|ENST00000291906|PKN3'] 43495 13748 IGLKASDFLP True H1975_Epitope_Rep2 1059.59644632431 1059.5953499358602 58.027 2 -0.0841132243674786 0.022332506203473945 0.25588659553436227 ['ENSG00000140854|ENST00000379661|KATNB1', 'ENST00000566611.5_1_16:57786940-57790081:+|nuORF'] 85808 13679 QHDPYITSI True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 57.685 2 -0.08415793842870246 0.022351778257448912 0.256019133529996 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 111219 5015 THISSQNSEL True PC9_epitope_Rep2 1114.52546621202 1114.52436993586 24.662 2 -0.08419141278607027 0.022351778257448912 0.2561183758239136 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 9167 16554 AVLGAVVTA True PC9_epitope_Rep1 799.48035394291 799.47924993586 68.497 2 -0.0842319568317879 0.022387608156350214 0.2562386009177936 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 37540 15015 GVVGEVTQV True PC9_epitope_Rep5 886.47599683846 886.47544496793 62.758 1 -0.0842610006104702 0.022387608156350214 0.2563247398746124 ['ENSG00000059378|ENST00000263549|PARP12', 'PARP12|p.Q445Sfs*10|1|0.14|ENSG00000059378|chr7:140034323-140034324|-/A|frameshift_variant', 'PARP12|p.C457Lfs*48|1|0.1|ENSG00000059378|chr7:140034286-140034287|-/A|frameshift_variant'] 81804 16508 PLPPPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 75.93 2 -0.08430265824135905 0.022387608156350214 0.2564483120536909 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 45453 10137 IQKNRRVVL True PC9_epitope_Rep4 1124.71421047156 1124.71255490379 46.669 3 -0.08430383188665955 0.022387608156350214 0.2564517939130934 ['nc|ENSG00000172663|Q9H6X4-2|TMEM134', 'nc|ENSG00000172663|Q9H6X4-3|TMEM134', 'ENSG00000172663|ENST00000308022|TMEM134'] 94232 9787 RRQEAIYEM True PC9_epitope_Rep3 1194.5815416194998 1194.5798849037901 42.599 3 -0.0843098295477697 0.022387608156350214 0.25646958753515275 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000465087.1_1_10:5494419-5494892:+|nuORF'] 45430 6583 IQHPSNVL True PC9_epitope_Rep6 906.49231560894 906.49120993586 34.026 2 -0.08432245766776601 0.022387608156350214 0.2565070539470495 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 132835 19089 VVLGIRPIRL True PC9_epitope_Rep3 1134.76009803482 1134.7584449037902 78.65 3 -0.08433204565074297 0.022387608156350214 0.2565355022037793 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 2797 5102 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 24.695 2 -0.08433449096935859 0.022387608156350214 0.2565427578717058 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 79368 7821 PASGPIRPIVR True PC9_epitope_Rep5 1161.6982260542497 1161.6965849037902 35.028 3 -0.0843488958382971 0.022387608156350214 0.2565855013845687 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 29229 16668 FTVDSRPLTQV True PC9_epitope_Rep5 1261.66665114245 1261.66554993586 69.118 2 -0.08439795801106956 0.022387608156350214 0.25673110731031956 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 118099 19140 TYGKIDLGF True PC9_epitope_Rep2 1012.5229470308799 1012.52184993586 78.992 2 -0.08441013767157118 0.022404614019520853 0.2567672596401232 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 37081 20665 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49014993586 87.646 2 -0.08443167215379425 0.022404614019520853 0.25683118503462016 ['ENSG00000010292|ENST00000315579|NCAPD2'] 98967 6767 SHAVAQSVL True PC9_epitope_Rep4 910.4872302285 910.48612993586 33.228 2 -0.08447251101951342 0.022404614019520853 0.25695243529886674 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19', 'SNX19|p.F516Lfs*6|1|0.1|ENSG00000120451|chr11:130914392-130914392|G/-|frameshift_variant'] 102870 10865 SPAAPVITA True PC9_epitope_Rep6 825.45961849833 825.45852993586 52.65 2 -0.08448517917201308 0.022404614019520853 0.2569900521431646 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 35059 9321 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42883496793 40.794 1 -0.08448680841874116 0.022404614019520853 0.25699489021124805 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 85485 12642 QFPGNSVAP True PC9_epitope_Rep3 915.4450310633499 915.44392993586 53.649 2 -0.08449098367621505 0.022404614019520853 0.2570072888752815 ['ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 31911 12212 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43661496793 52.056 1 -0.08452534247300221 0.022404614019520853 0.2571093294265729 ['ENSG00000100726|ENST00000262319|TELO2'] 85921 7249 QHGGPAVAI True PC9_epitope_Rep2 848.4504507969599 848.44934993586 33.272 2 -0.08457534051175837 0.022442683443227876 0.2572578485506626 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 98218 5868 SETQHWERR True PC9_epitope_Rep3 1227.5744820931097 1227.5728349037902 27.637 3 -0.08457786347818468 0.022442683443227876 0.25726534403536666 ['ENST00000560672.1_1_15:84949646-84950209:+|nuORF'] 140158 9540 YQSKYEELQIT True NCI_RA007_Epitope_Rep5 1400.6823607762399 1400.6812699358602 43.333 2 -0.08459017651504133 0.022442683443227876 0.25730192625435516 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 122667 15863 VGGDTKDLLL True PC9_epitope_Rep4 1029.57062549929 1029.5695299358601 68.948 2 -0.08459146338079078 0.022442683443227876 0.2573057496860557 ['ENST00000493287.5_1_1:1337440-1337563:-|nuORF'] 28107 11680 FQYEEEVKA True PC9_epitope_Rep5 1141.5291546101298 1141.52804993586 49.923 2 -0.08462581667150028 0.022442683443227876 0.25740782678922924 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 128170 14145 VPLRFPAGSAA True PC9_epitope_Rep5 1084.6029286870798 1084.60182993586 59.419 2 -0.08463092925610428 0.022461941727996773 0.2574230198287679 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 3455 10841 AGLAKSIGV True PC9_epitope_Rep5 814.4912529797799 814.49014993586 46.687 2 -0.08463155653261246 0.022461941727996773 0.25742488393048146 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3'] 1045 8390 AEAEPPSEVV True H1975_Epitope_Rep2 1026.48695544498 1026.48637496793 37.225 1 -0.08467360491827872 0.022474854366975067 0.2575498544699543 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 110785 12853 TGIQPGTSL True PC9_epitope_Rep2 872.46034677432 872.45924993586 54.739 2 -0.08467852737116643 0.022474854366975067 0.25756448608977695 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66611269-66612734:+|nuORF'] 142507 20322 YYIFIPSKF True PC9_epitope_Rep4 1176.6219327961599 1176.62029490379 86.311 3 -0.08475091443520476 0.022474854366975067 0.25777969397911854 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 28465 9510 FSDPESQTL True NCI_RA007_Epitope_Rep3 1022.4556553167 1022.45454993586 44.501 2 -0.08477090083374939 0.022474854366975067 0.2578391279735366 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'USP4|p.K811Sfs*32|1|0.71|ENSG00000114316|chr3:49284095-49284095|T/-|frameshift_variant', 'nc|ENSG00000114316|Q13107-3|USP4'] 26445 18476 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.46017496793 76.276 1 -0.08479265154128193 0.022474854366975067 0.2579038154692734 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 9660 13225 AYEHKFYEI True PC9_epitope_Rep5 1198.5658744720197 1198.56476993586 55.878 2 -0.08482947227060646 0.022474854366975067 0.25801333830088574 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 92413 7350 RLQPSSLTSV True PC9_epitope_Rep6 1086.6033226099 1086.6022299358601 37.449 2 -0.08486162900458873 0.022474854366975067 0.25810900506822393 ['nc|ENSG00000172113|O75414-3|NME6'] 109542 18200 TDRQLFDTI True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 75.216 2 -0.08490220456212025 0.022474854366975067 0.25822974048377323 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 89960 4460 RDFEGKVV True NCI_RA007_Epitope_Rep3 948.5028802926398 948.50178993586 24.356 2 -0.08497525201037376 0.022474854366975067 0.25844716158374315 ['ENSG00000066379|ENST00000332435|POLR1H'] 62656 21554 LLLGTLLQ True PC9_epitope_Rep5 869.55860426361 869.55750993586 87.945 2 -0.08505563844150017 0.022474854366975067 0.25868652068029346 ['ENSG00000171794|ENST00000304477|UTF1'] 111712 16609 TIGGTLSIL True H1975_Epitope_Rep1 873.5171333744499 873.51658496793 69.264 1 -0.08507694863615463 0.022474854366975067 0.2587499905371887 ['nc|ENSG00000180068|P47883|OR3A4P'] 29451 9997 FVELGTQPA True NCI_RA007_Epitope_Rep3 960.4916469025999 960.49054993586 46.414 2 -0.08508595405674782 0.022474854366975067 0.2587768141789282 ['ENSG00000158874|ENST00000367990|APOA2'] 126783 21530 VLPLDLVLI True NCI_RA007_Epitope_Rep5 993.6474192680099 993.64632993586 89.899 2 -0.08509548938296492 0.022474854366975067 0.25880521754825836 ['SLC26A7|p.V261L|1|0.47|ENSG00000147606|chr8:91334433-91334433|G/T|missense_variant'] 139731 22158 YNTLLPYTF True PC9_epitope_Rep5 1130.56481184286 1130.56370993586 90.268 2 -0.08515040476346455 0.022474854366975067 0.258968823750642 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 93472 11559 RQIIAVVL True NCI_RA007_Epitope_Rep3 910.5963867546599 910.59528993586 52.599 2 -0.08516307172573434 0.022474854366975067 0.2590065682038316 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 76263 7081 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54382490379 32.633 3 -0.08525721743282479 0.022474854366975067 0.2592871758086841 ['ENSG00000174231|ENST00000304992|PRPF8'] 28131 13239 FRAQEIDGQAL True PC9_epitope_Rep4 1246.6305999868998 1246.6295099358601 58.82 2 -0.08526483288294157 0.02249093107617896 0.2593098800536948 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3', 'nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000467894.5_1_1:33790468-33797238:-|nuORF', 'nc|ENSG00000134686|Q8IXK0-2|PHC2'] 33367 13849 GKVQIPIML True NCI_RA007_Epitope_Rep5 997.5994235297699 997.59832993586 59.946 2 -0.08528474286125703 0.02249093107617896 0.25936924262462263 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 104964 15910 SRDGMNIVL True PC9_epitope_Rep5 1003.5120650773499 1003.5114749679301 66.19 1 -0.0853103706925033 0.02249093107617896 0.2594456621070132 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 49275 8370 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 37.148 2 -0.08531123727164847 0.02249093107617896 0.25944824632852964 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 64367 20485 LPLLPAPGAAA True PC9_epitope_Rep5 989.5909670210498 989.58986993586 83.834 2 -0.08531131047794184 0.02249093107617896 0.2594484646371881 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 75308 19961 NILEHLEQL True PC9_epitope_Rep4 1107.59242357303 1107.5913299358601 84.914 2 -0.08532638265068024 0.02249093107617896 0.2594934131299005 ['nc|ENSG00000109572|P51790-2|CLCN3'] 9869 11631 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 52.496 2 -0.08535127014989242 0.02249093107617896 0.2595676405986464 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 127412 6990 VNESVYNAT True H1975_Epitope_Rep3 995.4559896698701 995.45488993586 31.849 2 -0.08536218777869702 0.02249093107617896 0.2596002056102272 ['PCDH7|p.S844Y|1|0.3|ENSG00000169851|chr4:30723953-30723953|C/A|missense_variant'] 2295 11780 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.5118349679301 50.456 1 -0.08536594968177967 0.02249093107617896 0.2596114270017186 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 39451 11275 HLAIKLEQV True PC9_epitope_Rep4 1049.62332977849 1049.62222993586 51.145 2 -0.08538837147882307 0.022530329289428077 0.2596783134932659 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 96963 11609 SAYDGKDYI True PC9_epitope_Rep5 1030.46074069714 1030.4596499358602 49.651 2 -0.08539971157271072 0.022530329289428077 0.25971214504268114 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 106046 10935 STAAKIMGV True PC9_epitope_Rep3 876.4738886634799 876.47278993586 47.045 2 -0.08541113785558017 0.022547755299427742 0.25974623569511585 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 24699 23691 FALSGPLFL True PC9_epitope_Rep1 963.5429541994699 963.54184993586 95.921 2 -0.08541418173521695 0.022547755299427742 0.2597553175335197 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 72724 7510 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep1 1057.4750115590298 1057.4744749679298 33.886 1 -0.08541748938594904 0.022547755299427742 0.25976518652879316 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'TXNRD1|p.Y161C|1|0.29|ENSG00000198431|chr12:104311357-104311357|A/G|missense_variant'] 98693 16508 SGFGGITML True H1975_Epitope_Rep1 881.43168949833 881.4311449679301 68.868 1 -0.08542373221581384 0.022547755299427742 0.25978381363209824 ['nc|ENSG00000141219|Q9BSJ5-2|MTNAP1', 'nc|ENSG00000141219|Q9BSJ5-3|MTNAP1', 'ENSG00000141219|ENST00000535032|C17orf80'] 120196 9463 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.49530993586 41.367 2 -0.08544185063083189 0.022547755299427742 0.25983787796833996 ['ENSG00000162231|ENST00000294172|NXF1'] 11726 10117 DHARTITVAL True PC9_epitope_Rep6 1095.60365696307 1095.60254993586 49.528 2 -0.0854429598881066 0.022547755299427742 0.25984118809143686 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 24708 19632 FAMEIDPSL True PC9_epitope_Rep6 1021.4790336135699 1021.47792993586 88.174 2 -0.08546550226250929 0.022566995768688293 0.2599084605922852 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 52566 7937 KLHDVELHQV True PC9_epitope_Rep1 1216.65642081192 1216.65478490379 35.352 3 -0.08546977860273278 0.022566995768688293 0.2599212232082918 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000560075.1_1_15:52439654-52476873:-|nuORF'] 5780 6226 APDEKYVAA True PC9_epitope_Rep3 962.4709114580199 962.46980993586 28.986 2 -0.08551565846117896 0.022586689770506336 0.2600581677536051 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 45969 12638 ISERQAEVL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 53.614 2 -0.08552021990315443 0.022604561205576596 0.2600717847189305 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 48269 7759 IYQRDPLKL True NCI_RA007_Epitope_Rep5 1144.6604435631998 1144.65880490379 36.543 3 -0.08553424046431836 0.022604561205576596 0.26011364132521486 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 128927 22385 VQIDGLVVL True PC9_epitope_Rep2 954.5749826037398 954.57388993586 91.599 2 -0.08554957756706466 0.022604561205576596 0.26015943170324596 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF'] 18930 10607 ELEERQNL True NCI_RA007_Epitope_Rep1 1029.5090878718897 1029.50798993586 45.246 2 -0.08555370543202606 0.022604561205576596 0.26017175644375873 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'ATAD5|p.N1157Pfs*17|1|0.06|ENSG00000176208|chr17:30869507-30869508|-/CCTTT|frameshift_variant', 'nc|ENSG00000176208|Q96QE3-2|ATAD5'] 98316 5279 SEVSPRISA True H1975_Epitope_Rep3 944.4927095317599 944.49160993586 25.388 2 -0.08556705483515131 0.022604561205576596 0.2602116160828895 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 36874 11863 GVLLNVDR True H1975_Epitope_Rep3 884.50796567308 884.50686993586 50.78 2 -0.08561868194386879 0.022622884770346494 0.2603657934799046 ['ENSG00000185269|ENST00000409678|NOTUM'] 141 8161 AADDSKLVL True NCI_RA007_Epitope_Rep3 930.5022115863 930.50110993586 39.219 2 -0.08564832237442466 0.022622884770346494 0.2604543288165984 ['nc|ENSG00000153046|Q9Y232-3|CDYL', 'ENST00000472453.5_1_6:4776866-4954287:+|nuORF', 'nc|ENSG00000153046|Q9Y232-4|CDYL', 'ENSG00000172352|ENST00000382407|CDY1B', 'ENSG00000182415|ENST00000250838|CDY2A', 'ENSG00000129873|ENST00000382867|CDY2B', 'ENSG00000153046|ENST00000397588|CDYL', 'ENSG00000172288|ENST00000306609|CDY1', 'nc|ENSG00000153046|Q9Y232|CDYL'] 2594 6381 AERGDWVQA True NCI_RA007_Epitope_Rep5 1030.4832074772198 1030.48210993586 31.217 2 -0.08566005692106755 0.022622884770346494 0.2604893833225606 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'DOK2|p.D205Tfs*3|1|0.4|ENSG00000147443|chr8:21910678-21910678|C/-|frameshift_variant', 'DOK2|p.A237Pfs*167|1|0.21|ENSG00000147443|chr8:21909829-21909841|CCTCTTCCAGGGC/-|frameshift_variant', 'ENSG00000147443|ENST00000276420|DOK2'] 70944 15604 LYGKIAEAF True PC9_epitope_Rep4 1010.5436824754598 1010.5431749679301 67.945 1 -0.08567011034111432 0.022622884770346494 0.2605194174668499 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 75306 22635 NILEDLETL True PC9_epitope_Rep4 1058.54955570154 1058.5484499358602 95.293 2 -0.08571628680104817 0.022641205382322133 0.260657387166976 ['ENSG00000095139|ENST00000264028|ARCN1'] 137123 6500 YASSANLHLPK True NCI_RA007_Epitope_Rep5 1199.62987171091 1199.62822490379 31.668 3 -0.08572736840259407 0.022641205382322133 0.26069050244173764 ['CON__P34955'] 104955 16000 SRDGMNIVL True PC9_epitope_Rep1 1003.5120650773499 1003.5114749679301 66.355 1 -0.08578556522231429 0.022641205382322133 0.2608644430349863 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 55116 15720 LAAATATFAAA True PC9_epitope_Rep3 977.5181960036099 977.51708993586 65.625 2 -0.08584492678655771 0.022641205382322133 0.2610419174057582 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 6591 15842 APVPGIPTA True PC9_epitope_Rep2 821.46470387877 821.46360993586 66.195 2 -0.08587152879367922 0.022659979454951962 0.26112146712790435 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 100658 19911 SLDKFLANV True PC9_epitope_Rep5 1005.5494961318899 1005.54838993586 81.643 2 -0.0858867329360061 0.022659979454951962 0.261166937849713 ['CON__P01966'] 139587 23551 YLVYILNEL True PC9_epitope_Rep5 1138.6274120994199 1138.62687496793 95.573 1 -0.08590998439194726 0.022659979454951962 0.2612364822324194 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 14361 2553 DSYVGDEAQSK True PC9_epitope_Rep6 1197.51496109797 1197.5138699358602 14.749 2 -0.08593127364632325 0.022676010955372965 0.2613001648579822 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 141509 19279 YTLDGGDIINA True PC9_epitope_Rep4 1150.5506183307 1150.55007496793 82.262 1 -0.08593218850523185 0.022676010955372965 0.26130290163146563 ['ENSG00000204628|ENST00000512805|RACK1'] 107766 18276 SVSTQLSLV True PC9_epitope_Rep4 932.51786165044 932.51731496793 78.37 1 -0.08593420789392349 0.022676010955372965 0.26130894261778603 ['ENSG00000214194|ENST00000397764|SMIM30'] 31921 9779 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 42.602 2 -0.08595063407115998 0.022676010955372965 0.2613580836815409 ['ENSG00000100726|ENST00000262319|TELO2'] 102961 9116 SPFAEGTSA True PC9_epitope_Rep2 865.38176210045 865.3806699358599 40.405 2 -0.08596578022621945 0.022676010955372965 0.2614033989828212 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 131155 6277 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 29.152 2 -0.08600778450744659 0.022676010955372965 0.2615290882842544 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 120674 12501 VEIPDPVEA True H1975_Epitope_Rep2 967.4862271689899 967.48512993586 53.176 2 -0.08603606278323893 0.022676010955372965 0.2616137202108083 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 118929 15167 VADPYVVIM True NCI_RA007_Epitope_Rep3 1005.5205045027299 1005.51940993586 67.178 2 -0.08605234937575132 0.022676010955372965 0.26166246857417846 ['ENSG00000071894|ENST00000616140|CPSF1'] 99972 19911 SIPEGALVAV True PC9_epitope_Rep2 954.5385970950199 954.5380449679301 81.983 1 -0.08605419656484582 0.022676010955372965 0.26166799775632266 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 133980 11697 VYIRGSKIRF True PC9_epitope_Rep5 1237.7295261825295 1237.72789490379 49.989 3 -0.08606068892871133 0.02269569245020843 0.2616874317235426 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 108622 10527 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 45.382 3 -0.08609067666748124 0.022712171549380853 0.26177720395303355 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 84465 14324 QAIEKLEEI True PC9_epitope_Rep4 1071.58119018299 1071.58008993586 62.999 2 -0.08609850061968437 0.022712171549380853 0.2618006281976009 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B', 'ANKRD18A|p.E833A|1|0.3|ENSG00000180071|chr9:38577898-38577898|T/G|missense_variant', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 9521 11718 AVWGGSCSAP True PC9_epitope_Rep1 933.4014519992099 933.40034993586 49.949 2 -0.08613379595317121 0.022712171549380853 0.2619063108138573 ['ENST00000266087.11_1_22:32870816-32870993:+|nuORF'] 121591 23273 VFFEVSPVSF True PC9_epitope_Rep1 1156.5804619069997 1156.57936993586 94.305 2 -0.0861792546821907 0.022712171549380853 0.26204245254321756 ['ENSG00000087263|ENST00000566157|OGFOD1', 'nc|ENSG00000087263|Q8N543-2|OGFOD1'] 77927 17121 NVKEMWTEV True PC9_epitope_Rep3 1134.53794547202 1134.5368499358601 71.009 2 -0.08620964422726639 0.022712171549380853 0.26213348169324546 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 42329 12457 IEAELEKVA True PC9_epitope_Rep2 1000.5440763982799 1000.54296993586 53.224 2 -0.08628166897816633 0.022712171549380853 0.2623492805243422 ['ENSG00000100604|ENST00000216492|CHGA'] 138325 15253 YHDRLSQIL True PC9_epitope_Rep5 1143.6036569630699 1143.6020249037902 63.68 3 -0.08634888144105458 0.022712171549380853 0.2625507308195536 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4'] 78628 9917 NYTARFSRF True PC9_epitope_Rep4 1160.57269118796 1160.5710449037902 45.798 3 -0.08635089253805711 0.022712171549380853 0.2625567595518763 ['ENSG00000144231|ENST00000272645|POLR2D'] 7959 7010 ATAVVDGAFK True NCI_RA007_Epitope_Rep4 977.5181960036098 977.51708993586 33.591 2 -0.08643359007779665 0.0227313910644895 0.262804716976195 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 96594 8168 SAGGFLGVK True NCI_RA007_Epitope_Rep4 834.4599528514999 834.45884993586 38.207 2 -0.08643539886302025 0.0227313910644895 0.2628101415146559 ['ENST00000426740.6_3_1:161514508-161514637:-|nuORF'] 64554 14311 LPSDIAAEA True PC9_epitope_Rep1 885.4443623570099 885.44326993586 59.871 2 -0.08649847575963182 0.02275106708544737 0.2629993393292554 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 41900 17422 IDALSCLYV True H1975_Epitope_Rep3 995.49976905815 995.4992249679301 72.694 1 -0.08652193133607346 0.02277074231411947 0.26306970894967546 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-3|CAND1'] 74480 10532 NEYRKRFMLKP True PC9_epitope_Rep3 1480.7972884725195 1480.7956349037902 45.451 3 -0.08657211551342246 0.022790416750553655 0.26322029516987405 ['ENSG00000073756|ENST00000367468|PTGS2'] 96460 13511 SAAMPGASL True PC9_epitope_Rep1 803.38473930591 803.38364993586 56.825 2 -0.08659548278565463 0.02280963118054437 0.2632904254568089 ['ENSG00000086062|ENST00000379731|B4GALT1'] 120028 11053 VDSFSLEVA True H1975_Epitope_Rep1 965.4705771048499 965.47002496793 47.476 1 -0.08660768863529332 0.02280963118054437 0.26332706110528403 ['ENST00000359541.6_1_2:27560353-27560389:-|nuORF'] 9076 13825 AVIEAEKIAQV True PC9_epitope_Rep4 1169.66558851329 1169.66448993586 61.074 2 -0.08662024163862321 0.022824249255293454 0.2633647410397327 ['ENSG00000107566|ENST00000421367|ERLIN1'] 114413 15586 TPTPVPVV True PC9_epitope_Rep1 808.4694549060399 808.46834993586 64.773 2 -0.08663314926359764 0.022824249255293454 0.26340348787244505 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 30881 10223 GAPQVVAVTG True PC9_epitope_Rep3 897.4919812557698 897.49088993586 44.273 2 -0.08663674741910421 0.022824249255293454 0.2634142894587687 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 39952 10095 HPKYSDMIVA True PC9_epitope_Rep2 1159.56957995347 1159.56848993586 44.164 2 -0.08663765724603821 0.022824249255293454 0.2634170207703511 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 39208 13165 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45884993586 55.644 2 -0.08664170016652181 0.022824249255293454 0.2634291578158433 ['ENSG00000132646|ENST00000379143|PCNA'] 77305 10711 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.45996993586 46.16 2 -0.08665865969787984 0.022824249255293454 0.26348007380630195 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 122418 9829 VGDSRLQLLP True NCI_RA007_Epitope_Rep4 1096.62405805448 1096.62296993586 44.656 2 -0.08666328247877866 0.022824249255293454 0.26349395308341983 ['ENST00000582766.5_1_17:43884387-43907895:+|nuORF'] 332 11674 AAIENLNEA True PC9_epitope_Rep3 943.46107505031 943.45996993586 49.924 2 -0.08668760371648097 0.022824249255293454 0.2635669795515493 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 28054 17708 FQSGDFHVI True PC9_epitope_Rep5 1048.4977949122 1048.49668993586 73.131 2 -0.08672376006992677 0.022824249255293454 0.2636755581356808 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 142407 17272 YYEYNHDLF True PC9_epitope_Rep4 1262.5244035828598 1262.5233099358602 74.442 2 -0.08673137222412279 0.022824249255293454 0.2636984201289689 ['ENSG00000151748|ENST00000324679|SAV1'] 118618 13167 TYSHGNYLF True PC9_epitope_Rep6 1100.49270953176 1100.4916099358602 62.289 2 -0.08675515185849077 0.022824249255293454 0.2637698443245056 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 134085 16521 VYKPVSIYL True PC9_epitope_Rep6 1080.6219327961599 1080.62082993586 75.985 2 -0.08675582953698632 0.022824249255293454 0.2637718799135957 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 107940 22055 SVWIGGSILA True PC9_epitope_Rep5 1001.5545815123298 1001.55348993586 89.862 2 -0.08685913835989681 0.022842537433585573 0.2640822752814158 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000428275.1_1_X:53172047-53172134:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENSG00000181786|ENST00000324436|ACTL9'] 77795 22030 NTVDFFNQI True PC9_epitope_Rep1 1096.5189242796 1096.5178299358602 89.553 2 -0.0868719064085502 0.022842537433585573 0.26412064835587934 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'nc|ENSG00000114978|Q9H8S9-2|MOB1A', 'ENST00000463975.1_1_2:74392309-74405801:-|nuORF', 'ENST00000509041.5_1_4:71768157-71841035:+|nuORF', 'ENST00000511449.1_1_4:71768157-71863814:+|nuORF', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 96132 4519 RYNPRTNQW True NCI_RA007_Epitope_Rep3 1233.60030291813 1233.59866490379 24.633 3 -0.08687296492953529 0.022842537433585573 0.26412382974160453 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 27071 21742 FLFSKFIEL True PC9_epitope_Rep4 1142.6375828603 1142.63648993586 91.825 2 -0.08687816629049794 0.022842537433585573 0.2641394626773948 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 87814 5468 QREAEQSNVAL True PC9_epitope_Rep6 1243.61567819875 1243.61458993586 28.973 2 -0.08693227453614595 0.022860362626526874 0.2643021113053984 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 13254 19929 DLSTSDEDDLY True H1975_Epitope_Rep1 1271.50412163075 1271.50302993586 82.942 2 -0.08695199298990296 0.022860362626526874 0.2643613954666956 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 85845 4688 QHETSSPAL True PC9_epitope_Rep3 968.4563240230399 968.45522993586 23.126 2 -0.08695340475176455 0.022860362626526874 0.26436564019436126 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 102728 21064 SMPDFDLHL True PC9_epitope_Rep1 1073.48518162317 1073.48408993586 85.854 2 -0.08701966177529592 0.022860362626526874 0.2645648875299004 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 127384 20813 VNEALSVLL True PC9_epitope_Rep5 956.5542471591599 956.55369496793 85.107 1 -0.08702428661937006 0.022860362626526874 0.26457879772737697 ['ENSG00000110328|ENST00000227756|GALNT18'] 131163 10418 VTEIMSM[Oxidation]GY True H1975_Epitope_Rep3 1045.44601961357 1045.44492993586 45.132 2 -0.0870499283024888 0.022878644586192324 0.26465592624587597 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 128168 14395 VPLRFPAGSAA True PC9_epitope_Rep3 1084.6029286870798 1084.60182993586 60.465 2 -0.08708126177956411 0.022878644586192324 0.26475018848526205 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 17310 12789 EHAKFLNSL True PC9_epitope_Rep5 1057.5556441414901 1057.5545499358602 54.204 2 -0.087114673485924 0.022878644586192324 0.264850718733041 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10'] 23280 12858 EVPTEYWTY True H1975_Epitope_Rep3 1186.51825557326 1186.51714993586 54.681 2 -0.08713278641685804 0.022878644586192324 0.264905224399538 ['ENST00000549540.1_2_12:85286033-85305752:-|nuORF'] 20780 15537 EQHLKALKCL True PC9_epitope_Rep1 1181.65906366421 1181.65741490379 64.588 3 -0.08719139681526072 0.02291796615626069 0.26508162870264695 ['ENSG00000137492|ENST00000260045|THAP12', 'ENST00000520248.1_1_8:79672597-79674655:-|nuORF', 'ENST00000551685.2_1_12:43963803-43964301:-|nuORF'] 134262 16853 VYNENLVHMI True PC9_epitope_Rep6 1230.60669373818 1230.60558993586 77.341 2 -0.08720006095800044 0.02291796615626069 0.2651077101438076 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 96895 13095 SATSLLHTV True PC9_epitope_Rep5 927.5025459394701 927.50144993586 55.374 2 -0.08723394245415295 0.022956822663071908 0.26520971333144927 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 127407 21291 VNEQLYIL True PC9_epitope_Rep3 990.5385970950199 990.53750993586 87.19 2 -0.08723647332308208 0.022956822663071908 0.26521733341037496 ['ENSG00000115616|ENST00000233969|SLC9A2'] 72514 22690 MLFPGSIAL True PC9_epitope_Rep2 947.51502519947 947.51392993586 92.771 2 -0.08723800179113349 0.022956822663071908 0.2652219354514302 ['ENSG00000101367|ENST00000375571|MAPRE1'] 60213 16397 LGPRLVLA True PC9_epitope_Rep5 837.5436229058099 837.54252993586 68.07 2 -0.08724280975811588 0.02297555577909667 0.26523641190973646 ['ENSG00000170348|ENST00000303575|TMED10'] 22229 12923 ESYSVYVY True NCI_RA007_Epitope_Rep2 1008.4440280038398 1008.44347496793 54.889 1 -0.08728727990298056 0.02297555577909667 0.2653703245784307 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14'] 641 17623 AASTLVTWL True H1975_Epitope_Rep2 960.52803241132 960.52692993586 73.104 2 -0.08730941948528659 0.02297555577909667 0.26543700420590105 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 73734 12771 NAAPGVDL True PC9_epitope_Rep2 755.38136817763 755.38026993586 54.428 2 -0.08738556394654243 0.022994749230490677 0.2656663898106283 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 7591 11839 ASFGMEVTAP True H1975_Epitope_Rep2 1008.45863252216 1008.45752993586 50.614 2 -0.08738800490633615 0.022994749230490677 0.265673744623698 ['ENSG00000013523|ENST00000251089|ANGEL1'] 23756 14205 EYGKVEFVF True NCI_RA007_Epitope_Rep5 1116.54916177872 1116.5480699358602 61.33 2 -0.08742780923441786 0.023029888571543505 0.2657936906832618 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'ENST00000479185.1_1_2:218746916-218750490:-|nuORF'] 3773 5637 AGTAGGAEVAP True H1975_Epitope_Rep2 899.4348603024699 899.43376993586 26.682 2 -0.08743082184251687 0.023029888571543505 0.2658027697998003 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 27072 22835 FLFSKFIEL True PC9_epitope_Rep5 1142.6375828603 1142.63648993586 92.83 2 -0.08746142808701848 0.023029888571543505 0.2658950155817683 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 117156 21126 TVLDAIYEV True PC9_epitope_Rep4 1021.53317736141 1021.53208993586 89.424 2 -0.0874666216547242 0.023029888571543505 0.26591067011367664 ['ENSG00000180346|ENST00000603357|TIGD2'] 139016 16321 YLADIFTKL True H1975_Epitope_Rep1 1082.6011973515801 1082.60010993586 68.135 2 -0.08746692315606898 0.023029888571543505 0.2659115789158249 ['ENSG00000236287|ENST00000413761|ZBED5'] 6659 16962 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 77.79 2 -0.08752874574799199 0.023029888571543505 0.2660979561555427 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 35603 15266 GTASGFYTV True PC9_epitope_Rep4 901.4181476091701 901.41704993586 66.651 2 -0.08755530220120572 0.023029888571543505 0.2661780333711486 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 122253 7579 VGARIYHTI True PC9_epitope_Rep2 1028.5767139392399 1028.57560993586 34.522 2 -0.08755973314480522 0.023029888571543505 0.2661913952576706 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant', 'ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 128503 7407 VPSPVSNSA True PC9_epitope_Rep3 856.4290466460401 856.4279499358599 33.498 2 -0.08756488665116106 0.023029888571543505 0.26620693645496885 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160507-49161165:-|nuORF'] 93306 7873 RPRVTEPISA True PC9_epitope_Rep3 1124.6302060640799 1124.62855490379 35.268 3 -0.08762048673631087 0.023029888571543505 0.2663746318407022 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 118616 13935 TYSHGNYLF True PC9_epitope_Rep4 1100.49270953176 1100.4916099358602 61.504 2 -0.0876276200057689 0.023029888571543505 0.26639614976299036 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 103556 14532 SPSGVILQEA True PC9_epitope_Rep4 999.5236753068698 999.52256993586 63.812 2 -0.08764889389007799 0.023047684170303482 0.26646032808963976 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 25501 11980 FEGGVVIAA True H1975_Epitope_Rep2 861.4596184983299 861.45852993586 51.162 2 -0.0876581006491553 0.023047684170303482 0.26648810477624746 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 120386 4597 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 22.787 2 -0.08769051952912534 0.023047684170303482 0.2665859220231858 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 80332 8548 PGGGGSLPAG True PC9_epitope_Rep5 768.37661715036 768.37552993586 37.824 2 -0.08769076522767295 0.023047684170303482 0.2665866634262105 ['ENST00000331457.8_1_22:31795578-31795629:+|nuORF'] 12025 17409 DHSIIETL True PC9_epitope_Rep1 926.47091145802 926.46980993586 71.763 2 -0.0877295802108327 0.023047684170303482 0.26670379991583576 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 106717 8621 [Acetylation]-STVHEILC[Carbamidomethyl]K True H1975_Epitope_Rep3 1127.56449516876 1127.5633899358602 38.154 2 -0.08778628132101018 0.023067331670822942 0.2668749529677139 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 142647 13785 YYPAKIEAI True PC9_epitope_Rep4 1066.5698972233 1066.5688099358601 60.92 2 -0.08780142571362082 0.023083728786294538 0.26692067445130485 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 102395 21170 SLTGVPILVV True PC9_epitope_Rep5 996.6219327961599 996.62082993586 86.48 2 -0.08781093119984959 0.023083728786294538 0.2669493735749327 ['ENSG00000250510|ENST00000311268|GPR162'] 104083 10650 SQDSTAVAL True PC9_epitope_Rep4 890.4345259492999 890.43397496793 48.715 1 -0.08781866690217423 0.023083728786294538 0.2669727303091971 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 35093 7786 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 34.942 2 -0.08781866999262171 0.023083728786294538 0.2669727396404905 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 21059 18544 EQVDKFFPL True PC9_epitope_Rep6 1121.5757108797297 1121.57460993586 83.97 2 -0.08782349636809295 0.023083728786294538 0.26698731256272185 ['ENSG00000132383|ENST00000254719|RPA1'] 133835 21352 VYGFPVNQL True PC9_epitope_Rep5 1035.53893144819 1035.5378299358601 87.19 2 -0.0878264047270884 0.023083728786294538 0.2669960943246733 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 134801 19202 VYTVVDEMFL True NCI_RA007_Epitope_Rep4 1214.5893123385397 1214.58820993586 83.02 2 -0.08782795047564795 0.023083728786294538 0.2670007617477073 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 29005 20490 FTEGELMSV True PC9_epitope_Rep1 1011.4582981689899 1011.45777496793 83.629 1 -0.08784451631930103 0.023083728786294538 0.2670507848760645 ['STK11-HMHA1|1|fusion', 'STK11|p.L282Afs*3|2|0.54|ENSG00000118046|chr19:1221314-1221315|-/C|frameshift_variant', 'ENSG00000118046|ENST00000326873|STK11', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'STK11|p.D284Efs*5|1|0.57|ENSG00000118046|chr19:1221326-1221333|CTGACCTG/-|frameshift_variant', 'STK11|p.P281Rfs*6|1|0.7|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'STK11|p.N259Kfs*28|1|0.77|ENSG00000118046|chr19:1221255-1221255|C/-|frameshift_variant', 'STK11|p.T250Rfs*37|1|0.54|ENSG00000118046|chr19:1221227-1221227|C/-|frameshift_variant', 'STK11|p.D176Tfs*111|1|0.54|ENSG00000118046|chr19:1220433-1220433|G/-|frameshift_variant', 'STK11|p.H168Lfs*119|1|0.44|ENSG00000118046|chr19:1220411-1220411|A/-|frameshift_variant', 'STK11|p.E265Gfs*19|1|0.52|ENSG00000118046|chr19:1221271-1221280|GAGAACATCG/-|frameshift_variant', 'STK11|p.K44Sfs*7|1|0.24|ENSG00000118046|chr19:1207041-1207041|C/-|frameshift_variant', 'STK11|p.D30Gfs*133|1|0.53|ENSG00000118046|chr19:1207000-1207001|-/G|frameshift_variant', 'STK11|p.D53Gfs*110|2|0.64|ENSG00000118046|chr19:1207065-1207066|-/G|frameshift_variant', 'STK11|p.Q37Pfs*123|1|0.29|ENSG00000118046|chr19:1207022-1207029|CAGCCGCG/-|frameshift_variant', 'STK11|p.R75Sfs*23|1|0.39|ENSG00000118046|chr19:1207137-1207138|-/CTCCT|frameshift_variant', 'STK11|p.V77Sfs*19|1|0.77|ENSG00000118046|chr19:1207140-1207140|C/-|frameshift_variant', 'STK11|p.D53Tfs*11|4|0.32|ENSG00000118046|chr19:1207066-1207066|G/-|frameshift_variant', 'STK11|p.E57Kfs*7|2|0.43|ENSG00000118046|chr19:1207078-1207078|G/-|frameshift_variant', 'STK11|p.Y60*|1|0.59|ENSG00000118046|chr19:1207093-1207093|C/-|frameshift_variant', 'STK11|p.A43Pfs*8|1|0.17|ENSG00000118046|chr19:1207038-1207038|G/-|frameshift_variant', 'STK11|p.K41Tfs*8|1|0.14|ENSG00000118046|chr19:1207035-1207041|AGCGGGC/-|frameshift_variant', 'STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 103675 5912 SPVFRTGSE True PC9_epitope_Rep6 978.4770594676199 978.47596993586 31.01 2 -0.08788371794576856 0.02310012062726176 0.2671691761733132 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 116412 7046 TTISKVSQV True PC9_epitope_Rep3 961.5444107514498 961.54330993586 32.112 2 -0.08788689954734763 0.02310012062726176 0.26717878578531545 ['ENSG00000065183|ENST00000349139|WDR3'] 38571 5127 HEVIVSAA True NCI_RA007_Epitope_Rep4 824.43921740692 824.43812993586 26.237 2 -0.08792076679263414 0.02310012062726176 0.26728108650633153 ['ENSG00000179051|ENST00000375436|RCC2'] 57650 12867 LEEELKTFKRI True H1975_Epitope_Rep3 1404.7976653119997 1404.7965699358601 54.715 2 -0.08792670047928586 0.02310012062726176 0.2672990117495498 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 96704 12266 SALGYLHSL True NCI_RA007_Epitope_Rep4 959.5076313199099 959.50652993586 54.177 2 -0.0879281536645939 0.02310012062726176 0.26730340179656087 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000477460.6_1_6:134491408-134493948:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF', 'ENST00000474427.6_1_6:134493798-134493948:-|nuORF'] 107167 18339 SVIGSLNGV True PC9_epitope_Rep5 844.46543215476 844.4648849679301 75.556 1 -0.08796722754300698 0.02310012062726176 0.2674214548037426 ['ENST00000531017.5_1_19:50314409-50316363:-|nuORF', 'nc|ENSG00000010361|Q9BT04-3|FUZ', 'nc|ENSG00000010361|Q9BT04-2|FUZ', 'ENSG00000010361|ENST00000313777|FUZ'] 96186 12458 RYPDSHQLF True PC9_epitope_Rep3 1161.55670677065 1161.5550749037902 52.944 3 -0.08796936355549667 0.02310012062726176 0.2674279089288812 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 68078 12927 LTDLVPNTEY True H1975_Epitope_Rep3 1163.57101942211 1163.56992993586 54.952 2 -0.08799896705349704 0.02310012062726176 0.26751736499037626 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 39644 16949 HLPEELAEL True PC9_epitope_Rep6 1049.53932537101 1049.53822993586 77.738 2 -0.08810916663220204 0.02318007277698478 0.2678504787244555 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 64046 21676 LPALSLLAA True PC9_epitope_Rep2 867.5429541994699 867.54184993586 88.854 2 -0.08813501715606498 0.02319597989949749 0.26792864577402087 ['ENST00000311626.8_1_17:46629537-46651367:-|nuORF'] 7170 5513 AQYEDIAQKS True PC9_epitope_Rep6 1151.5458673034298 1151.5447699358601 29.191 2 -0.08819676715082692 0.02319597989949749 0.2681154051657673 ['ENSG00000167768|ENST00000252244|KRT1'] 142650 18175 YYPAQGVQQF True PC9_epitope_Rep1 1199.56112344475 1199.56002993586 74.7 2 -0.0881981850300381 0.02319597989949749 0.2681196941104634 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 34094 7512 GLYESHVGC True PC9_epitope_Rep3 963.4120166829099 963.41090993586 33.898 2 -0.0882230895468837 0.02319597989949749 0.26819503256151017 ['ENSG00000164733|ENST00000353047|CTSB'] 36064 17601 GVAANDVIVHI True PC9_epitope_Rep1 1106.6084079903399 1106.60730993586 72.494 2 -0.08822546278997796 0.02319597989949749 0.2682022123083853 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 96416 12112 SAAFPGASL True NCI_RA007_Epitope_Rep5 819.41266830591 819.41211496793 53.244 1 -0.08827931388243183 0.02319597989949749 0.2683651493434156 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 106368 20755 STIAILNSV True PC9_epitope_Rep5 916.5229470308801 916.52184993586 84.886 2 -0.08829498119796289 0.02319597989949749 0.2684125617531559 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 32932 8506 GIAGSLKTV True PC9_epitope_Rep6 844.5018176634801 844.50072993586 42.452 2 -0.08833380926379861 0.02319597989949749 0.26853007848619814 ['ENSG00000008083|ENST00000341776|JARID2'] 20329 21662 ENVLAIISL True PC9_epitope_Rep5 970.5698972233 970.5693449679301 88.37 1 -0.08835676378786508 0.02319597989949749 0.2685995627208105 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 33029 23738 GIIDDLVVL True PC9_epitope_Rep5 955.5589981864299 955.55790993586 96.289 2 -0.08841229326858409 0.023211881267710364 0.2687676840722125 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 48881 6266 KEAPSPFQA True H1975_Epitope_Rep2 973.4868958753299 973.48578993586 29.047 2 -0.08841877908174983 0.023211881267710364 0.2687873234566983 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 132356 6022 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 28.553 2 -0.08842158697033872 0.023211881267710364 0.2687958260797128 ['ENSG00000160161|ENST00000291495|CILP2'] 9881 22874 AYLIGSIGV True PC9_epitope_Rep2 891.50656869075 891.50546993586 93.476 2 -0.08843246524590238 0.023211881267710364 0.2688287678749307 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'ENST00000552300.1_1_12:78574665-78583766:+|nuORF'] 103673 5971 SPVFRTGSE True PC9_epitope_Rep4 978.4770594676199 978.47596993586 29.913 2 -0.08844060398645619 0.023211881267710364 0.2688534148755913 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 114481 6611 TPYKQEINA True PC9_epitope_Rep3 1062.53457434374 1062.53346993586 30.454 2 -0.08847897286837302 0.023211881267710364 0.26896962235729976 ['ENSG00000138356|ENST00000374700|AOX1'] 27104 18066 FLHDNMVEI True PC9_epitope_Rep2 1116.52738078832 1116.5262899358602 74.793 2 -0.08847974767835343 0.023211881267710364 0.2689719692357589 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'ENST00000593099.5_1_17:33324760-33324883:+|nuORF'] 45887 4595 ISDSEGFK True PC9_epitope_Rep4 881.4130622287299 881.41196993586 24.176 2 -0.08849684949060278 0.023211881267710364 0.2690237723645795 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 1251 14970 AEDGFFVPP True H1975_Epitope_Rep1 977.4494477374499 977.4488949679301 62.825 1 -0.08849804016790276 0.023211881267710364 0.2690273792041193 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 35582 15255 GTAGLLEQWLK True NCI_RA007_Epitope_Rep3 1214.66592286646 1214.66482993586 67.549 2 -0.08854603929098065 0.023230577549133876 0.26917279675535316 ['ENSG00000183624|ENST00000383463|HMCES'] 122752 16449 VGGLGVAVV True PC9_epitope_Rep2 769.46978925921 769.4692449679301 68.512 1 -0.08855263850551544 0.023230577549133876 0.2691927922478279 ['nc|ENSG00000157593|Q8TB61-5|SLC35B2', 'nc|ENSG00000157593|Q8TB61-4|SLC35B2', 'nc|ENSG00000157593|Q8TB61-3|SLC35B2', 'nc|ENSG00000157593|Q8TB61-2|SLC35B2', 'ENSG00000157593|ENST00000393812|SLC35B2'] 132590 7780 VVETDPSPY True H1975_Epitope_Rep1 1005.46549172441 1005.4649749679301 34.879 1 -0.08855371456139367 0.023230577549133876 0.26919605273576847 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 35597 16461 GTASGFYTV True PC9_epitope_Rep1 901.4181476091701 901.41704993586 68.142 2 -0.08857196845992728 0.02324880440461359 0.2692513652422579 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 5898 8294 APGKGILAA True PC9_epitope_Rep3 796.4806882960798 796.47958993586 36.876 2 -0.088584784858921 0.02324880440461359 0.26929020403819864 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 109149 16282 TAMDVVYAL True NCI_RA007_Epitope_Rep5 981.4841189940099 981.48357496793 69.386 1 -0.08860030988064721 0.02324880440461359 0.2693372542045767 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 39966 11187 HPLLGVSA True PC9_epitope_Rep1 792.4493881678001 792.44828993586 47.913 2 -0.08861262646561782 0.02324880440461359 0.2693745833406451 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 113895 6865 TNQELQEINR True PC9_epitope_Rep2 1243.61567819875 1243.61458993586 31.809 2 -0.08867834583271354 0.02326702833031947 0.2695738026128935 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.R135I|1|0.08|ENSG00000182718|chr15:60357190-60357190|C/A|missense_variant'] 44703 16633 ILTVIRTEP True PC9_epitope_Rep3 1040.62299542532 1040.62188993586 69.114 2 -0.088679713777423 0.02326702833031947 0.26957795000933016 ['ENSG00000167360|ENST00000300778|OR51Q1'] 58487 7384 LEQDHFQVA True H1975_Epitope_Rep1 1085.5141732523298 1085.5130699358601 33.407 2 -0.08871249117869334 0.02326702833031947 0.26967733404616023 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 118073 13808 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.5429699358601 59.787 2 -0.08873504797484702 0.02326702833031947 0.2697457372433834 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 116702 23450 TVDDLAFLL True PC9_epitope_Rep5 1005.53826274185 1005.53716993586 95.185 2 -0.08875837297512426 0.023284781516825715 0.26981647768610967 ['nc|ENSG00000153093|Q9NUZ1-2|ACOXL', 'nc|ENSG00000153093|Q9NUZ1|ACOXL', 'ENSG00000153093|ENST00000439055|ACOXL'] 37671 10945 GVYDVVELK True NCI_RA007_Epitope_Rep4 1020.5491617787198 1020.54806993586 48.963 2 -0.08876247067526191 0.023284781516825715 0.2698289060639497 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 35601 16501 GTASGFYTV True PC9_epitope_Rep3 901.4181476091701 901.41704993586 68.608 2 -0.08878437895135627 0.023284781516825715 0.2698953582347501 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 45230 10445 IPTENSMTA True PC9_epitope_Rep1 962.43789707758 962.43678993586 45.065 2 -0.08878908416891837 0.023284781516825715 0.2699096309955449 ['ENSG00000046604|ENST00000261590|DSG2'] 103919 5687 SQALQHAL True NCI_RA007_Epitope_Rep4 866.46101548066 866.45990993586 28.485 2 -0.08880581738683617 0.023284781516825715 0.26996039194516164 ['ENSG00000138629|ENST00000395081|UBL7'] 31804 10271 GEIGLGTPP True H1975_Epitope_Rep2 839.43888305375 839.43833496793 44.516 1 -0.08886724314666751 0.023324493731918996 0.27014676406378907 ['ENSG00000131400|ENST00000253719|NAPSA'] 132212 16831 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 69.893 2 -0.08906452114706973 0.02339827274553123 0.2707456908974236 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 71552 4889 MAQTDPETND True PC9_epitope_Rep1 1120.43426824912 1120.4331699358602 23.671 2 -0.08907203418190243 0.02339827274553123 0.27076851110660255 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 18956 16016 ELEKLQAEL True PC9_epitope_Rep3 1071.5811901829898 1071.58008993586 66.753 2 -0.08908762303307123 0.02339827274553123 0.2708158634941205 ['ENSG00000103549|ENST00000324685|RNF40', 'ENST00000566703.1_1_16:30776326-30777900:+|nuORF', 'nc|ENSG00000103549|O75150-3|RNF40', 'ENST00000493683.5_1_16:30773821-30780773:+|nuORF'] 110247 4816 TERFGQGGAGP True NCI_RA007_Epitope_Rep4 1075.5046711977898 1075.50356993586 24.958 2 -0.08909861100243135 0.02339827274553123 0.27084924241541075 ['ENSG00000116560|ENST00000357214|SFPQ'] 92879 9822 RPFQGTMGV True PC9_epitope_Rep6 991.4909357099498 991.48982993586 48.244 2 -0.08909905438385539 0.02339827274553123 0.27085058934222916 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 105528 12377 SSAPGLTSV True PC9_epitope_Rep5 817.4181476091701 817.41704993586 52.604 2 -0.08914238215992348 0.02339827274553123 0.2709822261948632 ['ENSG00000115216|ENST00000379852|NRBP1'] 45025 19194 IPFGITEEA True PC9_epitope_Rep4 975.49131254943 975.49020993586 81.929 2 -0.08917446528811089 0.02339827274553123 0.27107971720437524 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 107224 17668 SVISVVSYL True H1975_Epitope_Rep1 965.5433481222899 965.54279496793 73.54 1 -0.08918828662674988 0.02339827274553123 0.271121720625915 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3', 'ENST00000543123.1_1_11:63449027-63517671:+|nuORF', 'nc|ENSG00000133318|O95197-6|RTN3', 'nc|ENSG00000133318|O95197-5|RTN3'] 15029 24131 DYLEWPEYF True PC9_epitope_Rep5 1260.5339056373998 1260.53280993586 97.806 2 -0.08919300967593499 0.02339827274553123 0.27113607472328904 ['ENSG00000129187|ENST00000438320|DCTD', 'nc|ENSG00000129187|P32321-2|DCTD'] 28026 13929 FQPPGPQAV True PC9_epitope_Rep4 939.4814165720697 939.48030993586 61.482 2 -0.08921995345472825 0.02339827274553123 0.27121796722097835 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 131551 22376 VTLDLVELT True PC9_epitope_Rep1 1001.56447748969 1001.56338993586 90.885 2 -0.08928161034296568 0.02339827274553123 0.27140540504164634 ['nc|ENSG00000100150|O75140-8|DEPDC5', 'nc|ENSG00000100150|O75140-5|DEPDC5', 'nc|ENSG00000100150|O75140-1|DEPDC5', 'nc|ENSG00000100150|O75140-4|DEPDC5', 'nc|ENSG00000100150|O75140-9|DEPDC5', 'ENSG00000100150|ENST00000651528|DEPDC5', 'nc|ENSG00000100150|O75140-2|DEPDC5', 'nc|ENSG00000100150|O75140-6|DEPDC5'] 54654 12135 KYLPESNTL True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 51.667 2 -0.08930032440361813 0.02339827274553123 0.27146230674122707 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 28522 11028 FSEENSALEY True H1975_Epitope_Rep2 1187.4982484046698 1187.49714993586 47.448 2 -0.08932610805381536 0.02339827274553123 0.27154071227929916 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 102828 18441 SNPVDILTYV True H1975_Epitope_Rep1 1119.58119018299 1119.58008993586 76.872 2 -0.08935799710828875 0.02339827274553123 0.27163769680461497 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 105146 16285 SRFPEALRL True PC9_epitope_Rep1 1087.61382772395 1087.6127299358602 67.458 2 -0.08941203381704227 0.023416946157090356 0.2718020721666975 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 55399 12350 LAESNDVAI True PC9_epitope_Rep6 930.4658260775799 930.46472993586 58.907 2 -0.08941505669974038 0.023416946157090356 0.271811268757886 ['ENST00000425050.5_1_10:109631494-109803030:-|nuORF'] 111998 16662 TIRNVFSV True PC9_epitope_Rep1 934.52361573722 934.52250993586 68.919 2 -0.08941939282536465 0.023416946157090356 0.2718244608868327 ['ENSG00000100271|ENST00000266254|TTLL1', 'nc|ENSG00000100271|O95922-4|TTLL1', 'ENST00000439248.5_1_22:43464548-43465849:-|nuORF'] 49271 8137 KEQLPPLAA True H1975_Epitope_Rep3 965.5545815123298 965.55348993586 36.276 2 -0.08945934857210987 0.023435617318660132 0.2719460338714974 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 15187 8267 EAAVVAAAV True H1975_Epitope_Rep3 799.4439684341899 799.44341496793 36.784 1 -0.08948143827942559 0.023435617318660132 0.27201325572871027 ['ENSG00000154174|ENST00000284320|TOMM70'] 121627 9952 VFHPRQELI True PC9_epitope_Rep4 1137.62947778809 1137.62782490379 45.935 3 -0.08951756976776139 0.023435617318660132 0.27212322344517365 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant'] 136983 14584 YAISKPEVL True PC9_epitope_Rep5 1018.5698972232999 1018.56880993586 61.098 2 -0.08951794302517359 0.023452873378579174 0.2721243595663452 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'ZNF746|p.C265Afs*6|1|0.13|ENSG00000181220|chr7:149476968-149476968|T/-|frameshift_variant'] 118422 14851 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47107496793 62.125 1 -0.08951999011120709 0.023452873378579174 0.27213059052329225 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 125228 13741 VIISAPSADA True PC9_epitope_Rep2 942.5022115863 942.50110993586 58.143 2 -0.08952986419649908 0.023452873378579174 0.27216064627271525 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 88561 10080 QTDHLFFKY True H1975_Epitope_Rep3 1197.5818588893299 1197.58021490379 43.811 3 -0.08953341785252965 0.023452873378579174 0.2721714635914495 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 67810 21645 LTAEDLFEA True PC9_epitope_Rep1 1007.4811417885498 1007.48004993586 88.086 2 -0.08957793303771976 0.023452873378579174 0.27230698281688653 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 118561 13936 TYQRWQFTL True NCI_RA007_Epitope_Rep4 1241.61930702721 1241.61820993586 60.881 2 -0.08961822078951473 0.023452873378579174 0.27242965645473766 ['ENSG00000174231|ENST00000304992|PRPF8'] 85978 15142 QHITLPVSV True PC9_epitope_Rep6 992.5654805492 992.56438993586 70.309 2 -0.0896465443778277 0.023470125281079345 0.2725159137009266 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 96461 13710 SAAMPGASL True PC9_epitope_Rep3 803.38473930591 803.3841949679301 57.816 1 -0.0896495602479368 0.023470125281079345 0.27252509896181354 ['ENSG00000086062|ENST00000379731|B4GALT1'] 4044 14970 AHGVSLVL True PC9_epitope_Rep3 794.46503823194 794.46394993586 62.713 2 -0.08966069824151078 0.023470125281079345 0.27255902241619223 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 83150 8233 PSRRLSSPAP True H1975_Epitope_Rep3 1066.5883412521 1066.5872499358602 36.651 2 -0.0896693989731685 0.023470125281079345 0.272585523817692 ['ENST00000373880.8_1_10:60936426-60936663:+|nuORF'] 3775 5801 AGTAGGAEVAP True H1975_Epitope_Rep3 899.4348603024699 899.43376993586 27.337 2 -0.08974218448017096 0.023470125281079345 0.2728072617076943 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 10010 20427 AYQSIQNYL True PC9_epitope_Rep1 1098.53457434374 1098.53346993586 83.387 2 -0.08976272706436535 0.023470125281079345 0.27286985731202884 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 120638 13098 VEIILHVV True NCI_RA007_Epitope_Rep4 920.5695033004799 920.56840993586 57.479 2 -0.08985753686843304 0.02348784453857427 0.2731588306268241 ['ENSG00000185627|ENST00000532097|PSMD13', 'nc|ENSG00000185627|Q9UNM6-2|PSMD13', 'ENST00000534590.5_1_11:244044-244236:+|nuORF', 'ENST00000527047.5_1_11:237024-247462:+|nuORF'] 55736 16532 LALPRALQ True PC9_epitope_Rep5 880.5494365622399 880.54832993586 68.592 2 -0.08985996984628312 0.02348784453857427 0.2731662478289358 ['ENST00000597244.1_1_19:16688850-16689066:-|nuORF'] 18498 15687 EKFQHYPHIKR True PC9_epitope_Rep4 1481.78916631697 1481.7875249037902 68.267 3 -0.08986339876299955 0.02348784453857427 0.2731767014021716 ['ENSG00000164934|ENST00000612750|DCAF13'] 120053 13374 VDSQILYY True H1975_Epitope_Rep3 999.49131254943 999.49020993586 56.706 2 -0.08988719459168325 0.02348784453857427 0.27324925115293675 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 11722 12480 DHARTITVAL True PC9_epitope_Rep3 1095.60365696307 1095.60254993586 53.03 2 -0.08990194475202519 0.02348784453857427 0.2732942260748956 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 103541 4720 SPRTDPYSA True PC9_epitope_Rep1 992.4563240230399 992.45522993586 23.025 2 -0.08993140797713947 0.023506032077403295 0.273384071961308 ['ENSG00000043355|ENST00000376335|ZIC2'] 31918 12202 GEMEPPALP True H1975_Epitope_Rep3 939.4371688015898 939.43606993586 52.107 2 -0.09002707508974894 0.023506032077403295 0.2736758856402932 ['ENSG00000100726|ENST00000262319|TELO2'] 117681 21142 TVTSVLTSV True PC9_epitope_Rep2 905.50696261357 905.50586993586 86.777 2 -0.09002774971526237 0.023506032077403295 0.2736779439083545 ['ENSG00000106689|ENST00000373615|LHX2'] 111485 5985 THVSNGCQL True PC9_epitope_Rep5 957.43381475665 957.43270993586 28.016 2 -0.09004913017500471 0.023506032077403295 0.2737431785401607 ['ENSG00000171223|ENST00000302754|JUNB'] 79107 6458 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 29.646 2 -0.09007116787052287 0.023525633305231042 0.2738104251901508 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 134248 19609 VYNAVLELF True NCI_RA007_Epitope_Rep4 1066.5698972233 1066.5688099358601 84.735 2 -0.09009738474562026 0.02354239839438033 0.27389043320561496 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22'] 29219 8048 FTTREGLY True H1975_Epitope_Rep3 985.4868958753298 985.48578993586 35.93 2 -0.09017327292227967 0.02354239839438033 0.2741220811067856 ['nc|ENSG00000140153|Q8TBZ3-8|WDR20', 'ENST00000561154.1_1_14:102606260-102633856:+|nuORF', 'nc|ENSG00000140153|Q8TBZ3-3|WDR20', 'nc|ENSG00000140153|Q8TBZ3-4|WDR20', 'nc|ENSG00000140153|Q8TBZ3-5|WDR20', 'nc|ENSG00000140153|Q8TBZ3-6|WDR20', 'ENSG00000140153|ENST00000342702|WDR20', 'nc|ENSG00000140153|Q8TBZ3-2|WDR20', 'nc|ENSG00000140153|Q8TBZ3-7|WDR20'] 118106 20658 TYGPSFPAF True PC9_epitope_Rep4 985.4545331178899 985.45342993586 87.619 2 -0.09017589279609026 0.02354239839438033 0.2741300796839427 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 119760 17986 VAYLDPLEL True NCI_RA007_Epitope_Rep3 1031.5539128059897 1031.55280993586 78.816 2 -0.0902756862738334 0.02354239839438033 0.2744348244739118 ['ENSG00000187244|ENST00000270233|BCAM'] 107142 19000 SVIDIINGEA True PC9_epitope_Rep6 1029.5342399905699 1029.5331499358601 85.727 2 -0.09029888952359068 0.02354239839438033 0.2745057014272431 ['ENSG00000168090|ENST00000303904|COPS6'] 124812 11236 VHGPPVQL True PC9_epitope_Rep1 845.47593726881 845.47484993586 48.099 2 -0.09029901484676378 0.02354239839438033 0.2745060842614579 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 27922 7202 FQEENTEKL True PC9_epitope_Rep4 1136.5349682665599 1136.5338699358601 35.005 2 -0.0902997892287212 0.02354239839438033 0.27450844982969447 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 118129 17506 TYIKFINLF True NCI_RA007_Epitope_Rep4 1157.6484818971699 1157.64738993586 75.785 2 -0.09030665546693227 0.023561995745193274 0.274529425058001 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50303271-50309027:+|nuORF'] 117724 19436 TVVATVLAT True PC9_epitope_Rep5 873.5171333744499 873.51602993586 79.811 2 -0.09036850300621775 0.023579226200032107 0.27471838874375015 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 107829 18848 SVVDGTPLV True PC9_epitope_Rep3 885.48074786573 885.4801949679301 77.721 1 -0.09039548987627992 0.023579226200032107 0.27480085882303995 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 21317 5976 ERERQYRKDKK True NCI_RA007_Epitope_Rep2 1534.8328220340998 1534.83118490379 27.854 3 -0.09040100475541275 0.023579226200032107 0.2748177131748266 ['ENSG00000159450|ENST00000614923|TCHH'] 80206 16111 PFYRGERITF True PC9_epitope_Rep1 1284.6615061923596 1284.65986490379 66.788 3 -0.09042182951629639 0.023579226200032107 0.27488136078958053 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 45023 19900 IPFGITEEA True PC9_epitope_Rep2 975.49131254943 975.49020993586 81.94 2 -0.09042977222109312 0.023579226200032107 0.27490563801094203 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 120188 9036 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48528496793 39.71 1 -0.0904486960637175 0.023579226200032107 0.2749634830931199 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 58972 7114 LEVAKSLSA True H1975_Epitope_Rep2 916.5229470308799 916.52184993586 32.296 2 -0.09048500193119166 0.023597399470262462 0.27507447428161524 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 98187 6458 SETEATPVP True NCI_RA007_Epitope_Rep3 929.4341915961298 929.43364496793 32.432 1 -0.09049292711114378 0.023597399470262462 0.2750987048999027 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 28028 9269 FQPPIHQSL True NCI_RA007_Epitope_Rep5 1065.56072952193 1065.5596299358601 42.3 2 -0.09053898920452938 0.023597399470262462 0.2752395534284473 ['nc|ENSG00000273749|Q7L576-2|CYFIP1', 'nc|ENSG00000273749|Q7L576-3|CYFIP1', 'ENSG00000055163|ENST00000620254|CYFIP2', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENSG00000273749|ENST00000617928|CYFIP1'] 109017 20402 TAIDILTTC True PC9_epitope_Rep4 949.4790336135701 949.47792993586 86.623 2 -0.09054954740364789 0.023597399470262462 0.2752718424094134 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 74507 8350 NFGTRDAE True NCI_RA007_Epitope_Rep1 908.3988091469199 908.39770993586 36.48 2 -0.09058009924489856 0.023615096005296845 0.27536528446904573 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 45920 8423 ISEELVQKY True H1975_Epitope_Rep2 1107.5811901829898 1107.58008993586 37.35 2 -0.09061092488376084 0.023615096005296845 0.27545957705943935 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 38456 7251 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 33.279 2 -0.09062398863971814 0.023615096005296845 0.2754995417774133 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 78695 4987 PAAAAAAAAA True PC9_epitope_Rep3 754.3973525949399 754.3962499358599 24.274 2 -0.09063400842761918 0.023615096005296845 0.27553019597417844 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENST00000257359.6_1_11:130297588-130298293:-|nuORF', 'ENST00000370272.8_1_1:93811487-93811679:+|nuORF', 'ENST00000280665.10_1_12:2062308-2062389:-|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 38455 7156 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 32.918 2 -0.09071327842040235 0.023615096005296845 0.27577276092134195 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 131216 18265 VTERNLLEV True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 75.464 2 -0.09080669473817399 0.023633737260251985 0.27605872504396073 ['VPS45|p.S343T|1|0.11|ENSG00000136631|chr1:150082807-150082807|G/C|missense_variant'] 54308 10289 KYAPRFNGF True PC9_epitope_Rep4 1098.5610638750998 1098.5599699358602 47.262 2 -0.0908172165368711 0.023633737260251985 0.2760909417188585 ['ENSG00000170832|ENST00000300896|USP32'] 32355 17845 GFGGDFDG True PC9_epitope_Rep5 770.28713343962 770.28658496793 73.66 1 -0.0908196143512435 0.023633737260251985 0.2760982837960095 ['ENSG00000015413|ENST00000690203|DPEP1'] 107869 9497 SVVKNTISL True NCI_RA007_Epitope_Rep4 959.56514619603 959.56404993586 43.381 2 -0.09086438678023452 0.023650952858575727 0.27623539098888994 ['ENST00000601004.1_1_19:23567552-23568092:+|nuORF'] 109093 16933 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.57388993586 70.375 2 -0.09086852047954622 0.023650952858575727 0.27624805106577194 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 99012 6976 SHDTTIRL True PC9_epitope_Rep5 941.49304388493 941.49194993586 31.801 2 -0.09087281201409234 0.023650952858575727 0.27626119478635874 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 108877 9936 TAAHGLEL True PC9_epitope_Rep5 810.42356734278 810.42246993586 43.192 2 -0.09090702979893968 0.023650952858575727 0.27636600298793584 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 101957 19192 SLQEKLWAI True PC9_epitope_Rep4 1086.6073453611798 1086.6062499358602 81.921 2 -0.09090783687894838 0.023650952858575727 0.2763684752483786 ['ENST00000217398.3_1_20:32295514-32298573:-|nuORF', 'ENSG00000101417|ENST00000409299|PXMP4'] 63955 9422 LNSVVQSV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 41.196 2 -0.09092268115564216 0.023650952858575727 0.27641394807712694 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 142586 21984 YYLSLPPEM True PC9_epitope_Rep1 1111.5259838059899 1111.52488993586 89.383 2 -0.09093957232029924 0.023670538203847465 0.2764656948823221 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 56746 10140 LDLLPPSELHA True H1975_Epitope_Rep3 1203.64993844915 1203.6488499358602 44.047 2 -0.09101350006791825 0.023690122763379604 0.2766922219534561 ['ENST00000360085.6_1_17:42043665-42081769:-|nuORF'] 106360 20829 STIAILNSV True PC9_epitope_Rep1 916.5229470308801 916.52184993586 84.946 2 -0.09104436538147442 0.02370780432035622 0.2767868207393762 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 128835 12618 VQDDPRLVHL True PC9_epitope_Rep5 1190.64077074778 1190.6391149037902 53.537 3 -0.09116626282415714 0.02370780432035622 0.2771605509798046 ['ENST00000473976.1_1_6:31937656-31938043:-|nuORF', 'ENST00000485557.5_1_6:31937656-31938645:-|nuORF', 'ENSG00000204348|ENST00000337523|DXO'] 124754 20151 VHCGIIEPLM True PC9_epitope_Rep1 1110.55657274162 1110.5554699358602 82.341 2 -0.09118955629092243 0.02370780432035622 0.27723199057293596 ['ENSG00000182481|ENST00000330459|KPNA2'] 17446 14915 EHDYTSVCL True PC9_epitope_Rep5 1065.44371073401 1065.4426099358602 62.374 2 -0.09123441256261049 0.02370780432035622 0.2773695828937862 ['ARV1|p.W199R|1|0.23|ENSG00000173409|chr1:230995906-230995906|T/C|missense_variant', 'ENSG00000173409|ENST00000310256|ARV1'] 100934 18305 SLFGKDIK True PC9_epitope_Rep2 906.5174677276199 906.51636993586 75.738 2 -0.09124706638407759 0.02370780432035622 0.2774084022685599 ['ENSG00000175318|ENST00000309731|GRAMD2A'] 111819 18857 TILPKVMQV True PC9_epitope_Rep5 1027.6099882134697 1027.6088899358601 77.551 2 -0.09133064171479496 0.02372738577560271 0.2776648496233308 ['ENSG00000140259|ENST00000267812|MFAP1', 'ENST00000484386.1_1_15:44097294-44102132:-|nuORF'] 24255 10975 EYSRRHPEYAV True PC9_epitope_Rep4 1405.67386178121 1405.67221490379 49.989 3 -0.09137846276694257 0.0237398243573806 0.27781162948556776 ['CON__P02769'] 21845 15762 ESAVDLFSY True H1975_Epitope_Rep2 1029.46549172441 1029.46497496793 65.805 1 -0.09138720637386658 0.0237398243573806 0.27783847011424934 ['ENST00000467753.1_1_6:127838909-127839799:-|nuORF', 'ENST00000481848.6_2_6:127837845-127839799:-|nuORF', 'ENST00000525778.5_2_6:127839703-127839799:-|nuORF'] 117159 22172 TVLEALQQL True PC9_epitope_Rep1 1013.57571087973 1013.5746099358599 90.102 2 -0.09138904454413725 0.0237398243573806 0.27784411295802414 ['BAP1|p.G554Vfs*17|1|0.73|ENSG00000163930|chr3:52403484-52403484|C/-|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 84381 18806 QAADLAYQL True PC9_epitope_Rep3 991.4974605590301 991.49636993586 77.563 2 -0.09140098931724364 0.0237398243573806 0.27788078233374336 ['ENSG00000147113|ENST00000398000|DIPK2B'] 10028 8098 AYRQGHFTY True PC9_epitope_Rep3 1141.53049202281 1141.52938993586 36.127 2 -0.09140215537099383 0.0237398243573806 0.27788436211799594 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 85815 14698 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 61.356 2 -0.0914183454689489 0.0237398243573806 0.2779340676275669 ['ENSG00000085872|ENST00000546361|CHERP'] 107175 12423 SVIKELRQL True PC9_epitope_Rep4 1084.6604435631998 1084.65934993586 55.589 2 -0.09144900534550711 0.0237398243573806 0.278028206872151 ['ATP2A2-IFT81|2|fusion', 'ATP2A2-IFT81|1|fusion', 'ENSG00000122970|ENST00000242591|IFT81'] 66472 15481 LSGVNYDEM True PC9_epitope_Rep1 1026.4328116971399 1026.43170993586 64.368 2 -0.09147314201910453 0.0237398243573806 0.27810232605507307 ['ENSG00000153975|ENST00000368576|ZUP1'] 2800 5531 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 26.339 2 -0.09149492523061575 0.0237398243573806 0.27816922502282504 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 111432 11078 THSPYVAQI True PC9_epitope_Rep5 1014.51344497634 1014.51234993586 47.602 2 -0.0914994498676611 0.0237398243573806 0.2781831215610472 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 137631 6138 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.37596993586 28.622 2 -0.09151554688467643 0.0237398243573806 0.27823256266544777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 140363 12190 YRDPYSGSTI True PC9_epitope_Rep5 1157.53530261973 1157.5342099358602 51.878 2 -0.0915397501070506 0.0237398243573806 0.2783069081831512 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 70143 14727 LVPPDQPEV True PC9_epitope_Rep3 992.51786165044 992.51676993586 61.785 2 -0.09159403181426953 0.0237398243573806 0.2784736753996123 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 1666 7422 AEFYALKG True H1975_Epitope_Rep2 897.4596184983299 897.45852993586 33.492 2 -0.0915960257522818 0.0237398243573806 0.27847980204851364 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 5166 17063 ALLSSLARC True PC9_epitope_Rep5 932.51133680136 932.51022993586 70.651 2 -0.09161273884102883 0.0237398243573806 0.2785311574410146 ['nc|ENSG00000107789|Q9UNW1-3|MINPP1', 'nc|ENSG00000107789|Q9UNW1-2|MINPP1', 'ENSG00000107789|ENST00000371996|MINPP1'] 1091 12403 AEALAAFTA True H1975_Epitope_Rep3 863.43888305375 863.43833496793 52.897 1 -0.09168619550344434 0.0237398243573806 0.2787569175430839 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000472050.5_1_2:203130664-203149064:+|nuORF'] 118413 13563 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47107496793 60.065 1 -0.0917043895092187 0.023758922126874648 0.27881284593605576 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 64819 10604 LQDAGLLAD True H1975_Epitope_Rep3 914.4709114580199 914.46980993586 45.857 2 -0.09171003355004778 0.023758922126874648 0.2788301966373601 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF', 'ENST00000320442.8_1_12:58014065-58016599:+|nuORF'] 37972 13652 HAGVISVL True PC9_epitope_Rep2 794.46503823194 794.46448496793 57.805 1 -0.0917989324929636 0.023778495097940933 0.27910354352013433 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 32149 11181 GEVFNELVGK True NCI_RA007_Epitope_Rep2 1090.5658744720197 1090.56476993586 48.073 2 -0.09186745197666665 0.023796158935086804 0.2793143006775405 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 37042 10082 GVPENGYQTLY True H1975_Epitope_Rep3 1239.5771674317102 1239.57606993586 43.819 2 -0.09187858313534607 0.023796158935086804 0.2793485447007851 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 108570 11935 SYNPITHQL True PC9_epitope_Rep2 1071.5349086969102 1071.53380993586 51.23 2 -0.09190078317988011 0.023796158935086804 0.2794168461785089 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 127617 9432 VPAAAAVAA True PC9_epitope_Rep5 739.42283906679 739.42229496793 41.235 1 -0.09191063008091754 0.023796158935086804 0.2794471436534212 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 85804 7310 QHDPSSNNAML True PC9_epitope_Rep5 1212.51933528576 1212.51822993586 33.08 2 -0.09191482726071187 0.023796158935086804 0.27946005816077724 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 83204 6562 PSTSVPAP True H1975_Epitope_Rep2 754.3861192049 754.3855749679301 30.151 1 -0.09194299300083625 0.023813819231463106 0.2795467288655944 ['ENSG00000153201|ENST00000283195|RANBP2'] 90537 8328 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64349490379 39.874 3 -0.09196281822218744 0.023813819231463106 0.27960774082777345 ['ENSG00000127540|ENST00000591899|UQCR11'] 128502 7475 VPSPVSNSA True PC9_epitope_Rep1 856.4290466460401 856.4279499358599 33.572 2 -0.09197193231680527 0.023813819231463106 0.27963579116442755 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160507-49161165:-|nuORF'] 63442 11004 LLVSNSRLE True PC9_epitope_Rep4 1029.5818588893299 1029.5807699358602 50.104 2 -0.09199244138874862 0.023813819231463106 0.2796989157867043 ['ENST00000540707.5_2_19:19144688-19153597:+|nuORF', 'ENST00000538663.5_1_19:19144747-19153597:+|nuORF'] 33528 6708 GLDVEDVK True NCI_RA007_Epitope_Rep5 873.4443623570099 873.44326993586 32.474 2 -0.09200999528351567 0.023813819231463106 0.2797529492176526 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 67548 6988 LSTQIAHLA True H1975_Epitope_Rep2 952.5341804209198 952.53308993586 31.802 2 -0.0920339596403366 0.023832909058109003 0.2798267216962464 ['ENSG00000167094|ENST00000373289|TTC16', 'ENST00000488285.1_1_9:130486913-130493681:+|nuORF', 'ENST00000489226.5_1_9:130485405-130489873:+|nuORF'] 108639 8320 SYPRRFSTL True PC9_epitope_Rep4 1125.59309227937 1125.59198993586 39.461 2 -0.09205862651056819 0.023832909058109003 0.27990266490447474 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 115154 7005 TRDGVLKL True PC9_epitope_Rep4 900.5392658013599 900.53816993586 34.192 2 -0.09208414113361241 0.023849607182940515 0.2799812267700722 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 57356 13345 LEAHFVPLV True H1975_Epitope_Rep1 1023.5753169569099 1023.57420993586 56.439 2 -0.09208454735546232 0.023849607182940515 0.27998247763541834 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 45228 6725 IPTDNQIKA True PC9_epitope_Rep2 998.53965972418 998.53856993586 31.278 2 -0.09210602740217712 0.023849607182940515 0.2800486235930722 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1'] 114222 10382 TPLYTDNTA True PC9_epitope_Rep1 994.46074069714 994.4596499358599 44.818 2 -0.0921238935509188 0.023849607182940515 0.28010364559949863 ['ENSG00000174231|ENST00000304992|PRPF8'] 133634 20368 VYAFSIENF True PC9_epitope_Rep6 1088.5178616504397 1088.51676993586 91.043 2 -0.09212437277555094 0.023849607182940515 0.28010512151685085 ['nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS', 'ENST00000528557.5_1_1:26759436-26769365:+|nuORF'] 83577 16506 PVAPAVPTV True PC9_epitope_Rep1 849.49600400705 849.49490993586 68.314 2 -0.09212517716742505 0.023849607182940515 0.28010759889213255 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 27738 11845 FPRPVTVEP True PC9_epitope_Rep6 1040.5654805492 1040.5643899358602 56.767 2 -0.0921646169095568 0.023849607182940515 0.28022907654897417 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 75904 10664 NLQTVNVDEN True PC9_epitope_Rep2 1144.53603089572 1144.5349299358602 46.331 2 -0.09217940145659251 0.023869170491211896 0.280274619569233 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 49211 5853 KENCFRQSTAK True NCI_RA007_Epitope_Rep1 1310.6401191247799 1310.63848490379 26.819 3 -0.09224045384869901 0.0238815539037926 0.28046271939925344 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 24757 11240 FASGAVEL True H1975_Epitope_Rep2 792.40176926904 792.40122496793 48.277 1 -0.0922411705011851 0.0238815539037926 0.28046492767277503 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8', 'ENST00000428182.2_1_12:15408356-15408710:-|nuORF'] 69546 13611 LVDDPLEY True H1975_Epitope_Rep1 962.4596780679799 962.45858993586 57.486 2 -0.09227397358294454 0.0238815539037926 0.2805660135865404 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 102386 8899 SLTGHISTV True PC9_epitope_Rep2 913.4868958753301 913.48578993586 39.586 2 -0.0922765212157413 0.0238815539037926 0.2805738649718473 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 173 4903 AAEAAAEAAAT True H1975_Epitope_Rep1 945.4403396057298 945.43924993586 23.936 2 -0.09227954206650625 0.0238815539037926 0.280583174850077 ['ENST00000242719.3_1_1:51701983-51702103:+|nuORF'] 119761 17999 VAYLDPLEL True NCI_RA007_Epitope_Rep3 1031.5539128059897 1031.55337496793 78.865 1 -0.09230423366416163 0.0238815539037926 0.28065927581113054 ['ENSG00000187244|ENST00000270233|BCAM'] 21694 5378 ERSGVSLAA True PC9_epitope_Rep4 888.4664947839199 888.46538993586 27.413 2 -0.09231790967357846 0.0238815539037926 0.28070142960134303 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 21402 8025 ERIMKAQAL True PC9_epitope_Rep5 1058.5906497512199 1058.58954993586 35.807 2 -0.09234656299897856 0.0238815539037926 0.2807897563583525 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 18747 6685 ELAVQIQK True H1975_Epitope_Rep3 927.53893144819 927.53782993586 30.668 2 -0.09236727727841464 0.0238815539037926 0.28085361706618484 ['ENSG00000141543|ENST00000649764|EIF4A3'] 9455 6002 AVVGPSHEV True PC9_epitope_Rep5 893.46068112749 893.45958993586 28.082 2 -0.09241371959828248 0.0238815539037926 0.2809968164686704 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 38637 18509 HFIAEHYMF True PC9_epitope_Rep5 1193.53280052193 1193.5317099358601 76.218 2 -0.09241794316161403 0.0238815539037926 0.2810098407604367 ['ENSG00000143753|ENST00000323699|DEGS1', 'ENST00000498813.1_1_1:224377853-224378832:+|nuORF'] 62985 17539 LLPNHSYVF True PC9_epitope_Rep1 1088.5654805492 1088.5643899358602 72.258 2 -0.0924396411672146 0.0238815539037926 0.28107675512637703 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 102706 16470 SMAPGLTSV True PC9_epitope_Rep3 861.4266041178901 861.42550993586 68.49 2 -0.09244509167057667 0.0238815539037926 0.2810935648958043 ['ENSG00000198682|ENST00000456849|PAPSS2', 'nc|ENSG00000198682|O95340|PAPSS2'] 53069 5165 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 24.721 2 -0.09245445047025293 0.0238815539037926 0.28112242907775264 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 103662 8983 SPVDYGTSA True PC9_epitope_Rep5 895.39232678415 895.39122993586 39.496 2 -0.09252373930480129 0.0238815539037926 0.2813361644657034 ['ENSG00000149658|ENST00000370339|YTHDF1'] 48178 23239 IYPPLLGALSF True PC9_epitope_Rep4 1189.6746966450098 1189.67358993586 97.632 2 -0.09253219672990749 0.0238815539037926 0.28136225749544413 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 55089 19019 LAAAISEVV True PC9_epitope_Rep3 871.5014833103099 871.50038993586 78.379 2 -0.0926111204466374 0.023897758458364216 0.2816058007000662 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST'] 6455 8502 APSGGRLLSA True PC9_epitope_Rep5 927.5137793295099 927.51268993586 37.645 2 -0.09261410362508793 0.023897758458364216 0.28161500783806354 ['nc|ENSG00000094914|Q9NRG9-2|AAAS', 'ENSG00000094914|ENST00000209873|AAAS', 'ENST00000546572.1_1_12:53702939-53703546:-|nuORF', 'ENST00000550033.5_1_12:53701834-53703447:-|nuORF'] 89249 16544 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48506993586 76.076 2 -0.09262541852843756 0.023897758458364216 0.28164993068880245 ['ENSG00000167658|ENST00000309311|EEF2'] 55117 14608 LAAATATFAAA True PC9_epitope_Rep4 977.5181960036099 977.51708993586 64.119 2 -0.09269934437878316 0.023897758458364216 0.28187814092328023 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 86902 17717 QLSEGSITL True PC9_epitope_Rep1 946.49712620586 946.49602993586 72.944 2 -0.0927027831909859 0.023897758458364216 0.28188875836177313 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF'] 18043 10459 EIEVFEPNP True H1975_Epitope_Rep1 1072.5076908895599 1072.5065899358601 45.185 2 -0.09271725926700325 0.023897758458364216 0.28193345541863785 ['TRPV3|p.G49V|1|0.25|ENSG00000167723|chr17:3545245-3545245|C/A|missense_variant'] 5829 9653 APFAAHGYGA True PC9_epitope_Rep3 960.4453654165198 960.44426993586 42.078 2 -0.09273556279627707 0.023897758458364216 0.28198997430556294 ['ENSG00000126067|ENST00000373237|PSMB2'] 67175 9737 LSQYSVQSL True PC9_epitope_Rep1 1023.5236753068698 1023.5225699358599 42.312 2 -0.09278235435315962 0.023897758458364216 0.28213448073281455 ['TNR|p.A563S|1|0.16|ENSG00000116147|chr1:175386122-175386122|C/A|missense_variant'] 96933 11729 SAVPPGTSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 50.114 2 -0.09282290790803895 0.02391731100516806 0.282259745879341 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 49839 8348 KIAELQTEFQK True NCI_RA007_Epitope_Rep1 1333.7241660185698 1333.7230699358602 36.471 2 -0.09286248516121251 0.023936862768663743 0.28238201641102 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'nc|ENSG00000196275|Q86UP8-6|GTF2IRD2'] 142728 16381 YYQGGKFQF True PC9_epitope_Rep3 1136.52909504048 1136.5279899358602 68.149 2 -0.09288584167864167 0.023956413748898325 0.28245418412699524 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 25769 7186 FETLQAQAGK True PC9_epitope_Rep2 1091.5611234447497 1091.56002993586 33.031 2 -0.09299075106536976 0.02397500350511747 0.2827784257321255 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 101968 8240 SLQFVHQECLK True NCI_RA007_Epitope_Rep2 1330.6703566239 1330.66924993586 36.689 2 -0.09299186505551713 0.02397500350511747 0.2827818695043943 ['ENSG00000173838|ENST00000311269|MARCHF10'] 46909 14235 ITMMCMASNIY True H1975_Epitope_Rep1 1276.5324087927202 1276.53130993586 59.935 2 -0.09299473740988767 0.02397500350511747 0.2827907491329867 ['MS4A4A|p.T91I|1|0.22|ENSG00000110079|chr11:60297267-60297267|C/T|missense_variant'] 91753 6958 RKFLDGNEL True NCI_RA007_Epitope_Rep3 1090.5771078620598 1090.5760099358602 34.475 2 -0.09306476166828723 0.02399455215510335 0.28300725668591364 ['ENSG00000213719|ENST00000375784|CLIC1'] 132354 5823 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 27.791 2 -0.09313713541950909 0.024028353457079352 0.2832310967402712 ['ENSG00000160161|ENST00000291495|CILP2'] 86507 13721 QLAESVANV True PC9_epitope_Rep1 929.4818104948899 929.48070993586 57.626 2 -0.09316040241450636 0.024028353457079352 0.28330307240341657 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 78654 14587 NYVEKGFQI True PC9_epitope_Rep4 1096.5553097883198 1096.5542099358602 64.034 2 -0.09319927888586733 0.024028353457079352 0.2834233513904841 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 48081 5184 IYNEIAGK True NCI_RA007_Epitope_Rep5 906.4810822188999 906.47998993586 26.634 2 -0.09322559357844135 0.024028353457079352 0.2835047770988495 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 25650 17129 FEQEIILVP True H1975_Epitope_Rep2 1086.5961119711399 1086.5950099358602 71.161 2 -0.09326450161806574 0.024028353457079352 0.2836251871924213 ['ENSG00000163904|ENST00000296257|SENP2', 'nc|ENSG00000163904|Q9HC62-2|SENP2'] 78381 11688 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.60641490379 56.088 3 -0.09331457596024534 0.024028353457079352 0.2837801833687357 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 120361 5817 VEEGAPPPP True H1975_Epitope_Rep3 891.4337976733099 891.43324496793 27.4 1 -0.09334813486536547 0.024028353457079352 0.2838840774202167 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 8559 7857 ATVGHGLTAV True PC9_epitope_Rep4 924.5028802926399 924.50178993586 37.638 2 -0.09335607411135105 0.024028353457079352 0.28390865846952607 ['FAM114A1|p.E412Rfs*27|1|0.09|ENSG00000197712|chr4:38931521-38931522|-/T|frameshift_variant', 'ENSG00000197712|ENST00000358869|FAM114A1'] 71447 17221 LYTGTVSSF True PC9_epitope_Rep4 973.47566248529 973.47511496793 74.249 1 -0.09337642448928338 0.024028353457079352 0.2839716699536086 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 41238 10266 HVLGPDLKSV True PC9_epitope_Rep2 1063.60259433391 1063.6014899358602 44.821 2 -0.09337746625158645 0.024028353457079352 0.28397489573978085 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 117977 7549 TYDKGYQF True NCI_RA007_Epitope_Rep3 1020.45526139388 1020.45416993586 36.816 2 -0.09337853349738658 0.024028353457079352 0.2839782004496306 ['nc|ENSG00000139197|P50542-2|PEX5', 'nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 6552 2552 APTTAATTAA True PC9_epitope_Rep4 874.43961132974 874.43850993586 14.727 2 -0.09338346810880702 0.024028353457079352 0.28399348059085344 ['ENSG00000140319|ENST00000267884|SRP14'] 105575 5862 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.53735490379 27.534 3 -0.09342157365363009 0.024028353457079352 0.2841114860809549 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 30173 10520 FYQEHPDL True PC9_epitope_Rep4 1047.4661604307498 1047.4650699358601 48.189 2 -0.09349862833836146 0.024067436878040967 0.2843501677206286 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 45158 13422 IPPHGIDSAI True PC9_epitope_Rep1 1018.54474510462 1018.54364993586 56.489 2 -0.09350401078874127 0.024067436878040967 0.2843668431009689 ['ENSG00000156103|ENST00000286614|MMP16'] 65749 12509 LSDDGSWTAY True H1975_Epitope_Rep2 1113.46146897313 1113.4608749679298 53.208 1 -0.09351636739755934 0.024086977414704468 0.2844051265713075 ['nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 97797 5594 SELEERRLP True H1975_Epitope_Rep3 1127.59348620219 1127.5918349037902 26.557 3 -0.0935297487075084 0.024146561217339074 0.2844465870447173 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000575323.1_1_16:3580476-3582910:+|nuORF'] 109317 15075 TAYDNFVEL True NCI_RA007_Epitope_Rep3 1070.49204082542 1070.49094993586 66.781 2 -0.09354859381625172 0.024165615552485635 0.28450498045569234 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 14039 12180 DRLKLQNEL True PC9_epitope_Rep1 1127.62987171091 1127.62822490379 51.708 3 -0.09360519534721873 0.024165615552485635 0.2846803937696074 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 1688 12893 AEGFPGLEA True H1975_Epitope_Rep2 889.4181476091699 889.4175949679301 54.706 1 -0.09361459661657505 0.024183700026025504 0.284709533219272 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2'] 63204 19023 LLSAALALY True H1975_Epitope_Rep1 933.55351888317 933.55297496793 79.302 1 -0.09365494001133223 0.024183700026025504 0.2848345916077415 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD'] 35046 9280 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42883496793 40.55 1 -0.09366739602634436 0.024183700026025504 0.2848732076552557 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 135421 20331 WHIDTILHV True PC9_epitope_Rep1 1132.60292868708 1132.60182993586 83.034 2 -0.09371809179139498 0.024183700026025504 0.28503039519293166 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000556741.5_1_14:24032738-24033292:-|nuORF'] 98287 17758 SEVNLFLVP True NCI_RA007_Epitope_Rep3 1016.5542471591599 1016.55314993586 77.864 2 -0.0937738130935272 0.024200812698921072 0.28520320360231777 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9'] 59633 14813 LFYTTDIVP True H1975_Epitope_Rep2 1067.55391280599 1067.55280993586 62.136 2 -0.09381442783930354 0.024200812698921072 0.2853291875538343 ['ENSG00000175398|ENST00000309675|OR10P1'] 14409 17252 DTDIVDEAIYY True H1975_Epitope_Rep2 1315.58197802863 1315.58147496793 71.65 1 -0.09381677438909715 0.024200812698921072 0.2853364670347963 ['ENSG00000111229|ENST00000228825|ARPC3'] 25972 20131 FGANAILGV True PC9_epitope_Rep4 860.4756029156399 860.4745099358599 85.57 2 -0.09383011277283171 0.024200812698921072 0.2853778468108511 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 88755 5231 QTMSDTTFK True NCI_RA007_Epitope_Rep5 1057.47501086229 1057.47390993586 26.818 2 -0.09384077472302776 0.024200812698921072 0.2854109251302258 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF'] 102015 17251 SLQQYLLF True H1975_Epitope_Rep1 1010.5436824754598 1010.5431749679301 71.817 1 -0.09387767480650944 0.024200812698921072 0.28552541773349294 ['ENST00000462265.5_1_1:241761073-241761154:-|nuORF'] 98188 6470 SETEATPVP True NCI_RA007_Epitope_Rep3 929.4341915961298 929.43308993586 32.479 2 -0.09391324122930092 0.02421937550040032 0.28563578904081705 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 47706 15724 IYAPPLPSL True NCI_RA007_Epitope_Rep3 969.55351888317 969.55242993586 69.491 2 -0.09395284510768222 0.02421937550040032 0.28575870889361227 ['ENSG00000121057|ENST00000337714|AKAP1'] 64893 10433 LQEDPPAGV True PC9_epitope_Rep4 924.4552613938798 924.45416993586 47.841 2 -0.09395760226611784 0.02421937550040032 0.2857734752115736 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 99169 11574 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.4914349679301 55.628 1 -0.09401936234034979 0.024238421200112086 0.2859652064004963 ['ENSG00000132646|ENST00000379143|PCNA'] 41052 2740 HTLNQIDSVK True H1975_Epitope_Rep3 1153.6091362663299 1153.60802993586 14.624 2 -0.0940529734089085 0.024238421200112086 0.28606957112646364 ['CON__P12763'] 87281 7557 QPQKVLASL True PC9_epitope_Rep3 982.5811306133398 982.58002993586 34.069 2 -0.09410042420983289 0.024257950883653904 0.2862169340964843 ['ENST00000327155.9_1_18:20513414-20516744:+|nuORF'] 64555 14319 LPSDIAAEA True PC9_epitope_Rep1 885.4443623570099 885.44381496793 59.901 1 -0.09412848574716658 0.024276508025457312 0.2863040955754249 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 120677 12421 VEIPDPVEA True H1975_Epitope_Rep3 967.4862271689899 967.48512993586 52.968 2 -0.09414689342724551 0.024276508025457312 0.2863612768976614 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 105094 5327 SREEGSPQL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 25.33 2 -0.09418705931520029 0.024276508025457312 0.28648606276914373 ['ENSG00000120278|ENST00000696526|PLEKHG1', 'PLEKHG1|p.S567Ffs*10|1|0.2|ENSG00000120278|chr6:150830811-150830815|CCTCC/-|frameshift_variant'] 58221 9054 LELGAHAPPP True PC9_epitope_Rep6 1000.5341804209199 1000.53308993586 44.883 2 -0.0941958217365632 0.024293604418474345 0.28651328829941125 ['ENSG00000119919|ENST00000344586|NKX2-3'] 126685 24031 VLPDMFFSF True PC9_epitope_Rep2 1101.5205045027299 1101.51940993586 97.933 2 -0.09419961389126161 0.024293604418474345 0.2865250711287675 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 115606 10733 TRTVTTLAV True PC9_epitope_Rep5 960.5603951687599 960.55928993586 46.277 2 -0.09425893242300869 0.024293604418474345 0.28670940742167317 ['ENSG00000165572|ENST00000379485|KBTBD6'] 33775 12458 GLKYSIETI True NCI_RA007_Epitope_Rep5 1022.5648118428599 1022.56370993586 54.576 2 -0.09431911348461361 0.024293604418474345 0.2868964704464848 ['ENST00000505312.5_1_5:118542414-118576152:+|nuORF'] 114433 9749 TPTYGDLNHL True H1975_Epitope_Rep1 1129.54038800017 1129.53928993586 42.429 2 -0.094321368538627 0.024293604418474345 0.28690348082137357 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 30074 18067 FYIHEVQEL True PC9_epitope_Rep2 1176.5815245361598 1176.5804299358601 74.797 2 -0.09436444842464085 0.024293604418474345 0.28703741752359613 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF'] 6777 20916 AQDGSFWNV True PC9_epitope_Rep1 1022.4457593393399 1022.44517496793 85.274 1 -0.09441801607572477 0.02431264257413855 0.2872039943113332 ['ENST00000295767.9_1_3:14163506-14166176:-|nuORF'] 45341 8187 IQDDAVHTL True PC9_epitope_Rep6 1010.50327421546 1010.50216993586 41.053 2 -0.09442086572684112 0.02431264257413855 0.28721285676975555 ['ENSG00000115816|ENST00000234170|CEBPZ'] 83233 18897 PSVSTALSPA True PC9_epitope_Rep2 928.48656152216 928.48546993586 78.051 2 -0.09445961070299244 0.02432875835300708 0.28733336458725034 ['ENST00000338820.7_1_10:74095033-74095504:-|nuORF'] 9527 15428 AVYDFFIGR True NCI_RA007_Epitope_Rep2 1086.5498304850598 1086.5487299358601 64.712 2 -0.0944690850309427 0.02432875835300708 0.2873628353559033 ['ENSG00000143815|ENST00000272163|LBR'] 63260 10213 LLSNDEVTIK True PC9_epitope_Rep6 1130.6183039677 1130.61720993586 49.93 2 -0.09447492914378927 0.02432875835300708 0.2873810145810783 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 71522 19963 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep2 1000.5415746809199 1000.54046993586 82.767 2 -0.09448157913788514 0.02432875835300708 0.2874017011863998 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 87176 18041 QPGEAWKELQV True PC9_epitope_Rep5 1283.65100107831 1283.64990993586 74.411 2 -0.09449755199342474 0.02432875835300708 0.2874513913921834 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant'] 82925 13754 PSCSAAVAM True PC9_epitope_Rep3 835.35681030591 835.35570993586 57.986 2 -0.09451229724320502 0.02432875835300708 0.2874972655251921 ['ENST00000427525.2_1_15:85175210-85177593:+|nuORF'] 104706 14792 SQVDRLVAL True PC9_epitope_Rep4 999.5712942056298 999.5707749679301 64.836 1 -0.09452533077019289 0.02432875835300708 0.28753781661724065 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 7034 5834 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep3 935.4348606187698 935.43376993586 29.928 2 -0.09453796169116588 0.02432875835300708 0.28757711716282586 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 62042 12654 LLDSKVPSV True PC9_epitope_Rep4 956.55424715916 956.55314993586 56.513 2 -0.09459795234841159 0.024348278414660984 0.28776380331804474 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant'] 92752 5974 RPAAGFVA True PC9_epitope_Rep4 787.4340724568299 787.43296993586 29.926 2 -0.09461495750259143 0.024367797695262483 0.28781673038789923 ['ENSG00000141526|ENST00000582743|SLC16A3'] 77828 13579 NVDGHLYEL True PC9_epitope_Rep6 1058.5032742154601 1058.5021699358601 63.97 2 -0.09472920677112157 0.02440683391349578 0.28817241721180253 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1', 'ENST00000510566.1_1_4:41263775-41266241:+|nuORF'] 35103 7853 GQVPPGESV True PC9_epitope_Rep5 868.42904664604 868.4279499358599 35.149 2 -0.09474657492111341 0.02440683391349578 0.28822650324717713 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 129938 10846 VRVDRDYVL True PC9_epitope_Rep2 1133.61930702721 1133.61766490379 47.036 3 -0.09482530133069073 0.02444635605257367 0.28847171285194373 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 9168 16653 AVLGAVVTA True PC9_epitope_Rep1 799.48035394291 799.47924993586 68.886 2 -0.09485675180380941 0.024459510809783803 0.2885696938976985 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 4248 11769 AIDQLHLEY True H1975_Epitope_Rep3 1100.5502244078798 1100.54912993586 50.413 2 -0.09488199731536828 0.024459510809783803 0.28864835306776887 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 112324 17942 TLAAHLPAEF True PC9_epitope_Rep2 1068.56039516876 1068.55928993586 74.319 2 -0.09490709277378252 0.024459510809783803 0.28872655274231457 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 88983 20135 QVIPQFQTV True PC9_epitope_Rep1 1058.5760452328998 1058.57547496793 82.28 1 -0.09499154357603537 0.024459510809783803 0.28898976771768453 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 32245 13871 GEYSFKIFP True NCI_RA007_Epitope_Rep3 1086.53859709502 1086.53750993586 61.887 2 -0.09499200962571071 0.024459510809783803 0.2889912205454879 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 18090 17043 EIHSGLLEV True PC9_epitope_Rep5 995.52876068731 995.52766993586 70.574 2 -0.09503262775409332 0.024459510809783803 0.2891178509942266 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF'] 36509 19533 GVGPVNISV True PC9_epitope_Rep1 840.4705175352 840.4699649679301 79.956 1 -0.09503698899000373 0.024459510809783803 0.28913144875974517 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 77889 21355 NVIDNLIVA True PC9_epitope_Rep2 969.5494961318899 969.5489449679301 87.611 1 -0.09505951728470144 0.024459510809783803 0.28920169288768616 ['ENSG00000143621|ENST00000361891|ILF2'] 72572 15877 MLPHSSFSL True PC9_epitope_Rep1 1017.4953523840501 1017.49424993586 65.88 2 -0.09511837461483634 0.024459510809783803 0.28938524274821675 ['ENST00000235382.6_1_1:192781079-192781220:+|nuORF'] 85697 11795 QGVVTTLENV True PC9_epitope_Rep1 1058.56078909158 1058.5596899358602 50.239 2 -0.09512815752649854 0.024459510809783803 0.28941575555324817 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'ENST00000492816.6_1_2:216226280-216244056:-|nuORF'] 96262 9727 RYQQWMERF True NCI_RA007_Epitope_Rep3 1342.6240751378198 1342.62296993586 45.331 2 -0.09519312927047002 0.024459510809783803 0.2896184324949523 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 4809 5942 ALEEAMEQK True PC9_epitope_Rep2 1047.4906609264297 1047.4895699358601 28.245 2 -0.09521493764765122 0.024459510809783803 0.2896864748762858 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 104952 11721 SRDGALEL True PC9_epitope_Rep1 859.43994568291 859.43884993586 49.96 2 -0.09524440409870343 0.024459510809783803 0.28977842007301696 ['CON__Q2UVX4'] 85002 8546 QEFVRALAA True NCI_RA007_Epitope_Rep3 1003.5450794577897 1003.5439899358599 40.687 2 -0.09524849128770689 0.024459510809783803 0.2897911743371496 ['ENSG00000105372|ENST00000598742|RPS19'] 31422 11519 GEAEAFAIGA True NCI_RA007_Epitope_Rep3 934.4396113297398 934.4390649679301 52.431 1 -0.09529431686353977 0.024479020839166435 0.2899341896127648 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 111415 9248 THSLTTPVV True PC9_epitope_Rep4 953.51819600361 953.51708993586 43.169 2 -0.09534483780572002 0.024498040156787457 0.29009188915423495 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 120180 5033 VEAPPPSSP True H1975_Epitope_Rep2 879.43379767331 879.43324496793 24.439 1 -0.09536040749893646 0.024498040156787457 0.2901404959448241 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 30143 22905 FYPALADLF True PC9_epitope_Rep4 1055.5327834385898 1055.5316899358602 96.323 2 -0.09538295372760541 0.024516567680524726 0.29021088808445 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 30672 5731 GALALEEK True PC9_epitope_Rep6 829.4545331178899 829.45342993586 30.199 2 -0.09542958936616003 0.024516567680524726 0.2903565106591214 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 5739 13913 APAPVIISS True PC9_epitope_Rep5 853.49091862661 853.49037496793 58.537 1 -0.09546514079525312 0.024516567680524726 0.29046754048769463 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'ENST00000490546.1_1_1:31439047-31452930:-|nuORF'] 17588 17649 EHIMDLTRL True PC9_epitope_Rep3 1126.58047899034 1126.57882490379 73.079 3 -0.09554932503233479 0.024534111813164842 0.2907305175563325 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 125149 14964 VIGPPVVL True H1975_Epitope_Rep2 792.5109257952 792.51037496793 62.71 1 -0.09559999941924846 0.024534111813164842 0.2908888584580753 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 35017 15033 GQTSVVSFL True NCI_RA007_Epitope_Rep3 936.4916469025999 936.49054993586 66.593 2 -0.0956163403909715 0.024534111813164842 0.29093992551226444 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 58143 5143 LEKPDPVAA True H1975_Epitope_Rep2 938.5072969667399 938.50618993586 24.859 2 -0.0956212141606987 0.024534111813164842 0.29095515714232983 ['ENSG00000169951|ENST00000395091|ZNF764', 'nc|ENSG00000169951|Q96H86|ZNF764', 'ENST00000395094.3_1_16:30543822-30545758:-|nuORF', 'ENST00000252799.3_1_16:30543822-30545758:-|nuORF', 'nc|ENSG00000169955|Q9BV97|ZNF747', 'ENSG00000169955|ENST00000693075|ZNF747'] 111176 9719 THGPPVQL True PC9_epitope_Rep5 847.45520182423 847.45410993586 42.352 2 -0.09563198822049887 0.024534111813164842 0.29098882956494104 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 93367 8456 RPYQPLPEA True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 42.225 2 -0.09564515186634312 0.024553616059824444 0.2910299721880838 ['ENSG00000165476|ENST00000373758|REEP3'] 102871 10798 SPAAPVITA True PC9_epitope_Rep6 825.45961849833 825.4590749679301 52.375 1 -0.09571158474159017 0.024571645640482236 0.2912376394171053 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 5832 7769 APFAAHGYGA True PC9_epitope_Rep6 960.4453654165198 960.44426993586 39.248 2 -0.095721682469183 0.024571645640482236 0.29126920944616214 ['ENSG00000126067|ENST00000373237|PSMB2'] 129137 22105 VQQVQVIL True PC9_epitope_Rep5 925.5596668927698 925.55856993586 90.06 2 -0.09573953893966612 0.024571645640482236 0.2913250399040733 ['ENST00000533105.1_1_11:47600795-47602306:+|nuORF'] 103280 17559 SPLLSLPAS True PC9_epitope_Rep6 883.50148331031 883.50038993586 80.18 2 -0.09577822460639474 0.024571645640482236 0.29144600906090684 ['ENST00000519757.5_1_5:179294406-179298488:-|nuORF'] 107546 15406 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 71.414 2 -0.09578751417726121 0.024589180760465394 0.2914750601065428 ['ENSG00000073756|ENST00000367468|PTGS2'] 38901 12778 HHFEQMLKL True PC9_epitope_Rep4 1181.6015487880898 1181.59990490379 57.013 3 -0.09578754920207525 0.024589180760465394 0.29147516964081494 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 118669 9867 TYSTEPNNL True PC9_epitope_Rep4 1037.46655435357 1037.46544993586 45.604 2 -0.0958224017571277 0.024589180760465394 0.29158417277884996 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 115127 10106 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 46.544 2 -0.095828665656992 0.024589180760465394 0.2916037650486204 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 26634 21912 FIPPDGDFEL True PC9_epitope_Rep5 1148.5389910178399 1148.5378899358602 89.324 2 -0.09582922799256446 0.024589180760465394 0.2916055239496598 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 49476 19252 KFAEEFYSF True PC9_epitope_Rep4 1166.5284263341398 1166.5278749679298 82.155 1 -0.09583750950298785 0.02460818806972653 0.29163142772396794 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 11053 14344 DAVEDLESVGK True PC9_epitope_Rep6 1160.55609763396 1160.5550099358602 67.072 2 -0.09583763666487173 0.02460818806972653 0.2916318254808637 ['ENSG00000161634|ENST00000293371|DCD', 'nc|ENSG00000161634|P81605-2|DCD'] 76417 15811 NQDKNFAFL True PC9_epitope_Rep6 1095.53490869691 1095.53380993586 73.08 2 -0.09584113452277368 0.024627686156921538 0.291642766708667 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 9184 17160 AVLQVTETV True PC9_epitope_Rep2 958.53351171458 958.53240993586 71.263 2 -0.09584419779973809 0.024646690786975033 0.29165234870133544 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 132406 9061 VVAGVAAE True PC9_epitope_Rep6 714.39120458534 714.39065496793 44.915 1 -0.09584782651700353 0.024646690786975033 0.29166369955393895 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 134887 11295 VYVQNVVKL True NCI_RA007_Epitope_Rep2 1060.6280808057597 1060.6269899358601 48.523 2 -0.09588281599989532 0.024665693897539427 0.2917731572349898 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 120508 9393 VEFDSVQSA True NCI_RA007_Epitope_Rep5 980.445090633 980.44398993586 42.77 2 -0.09589971933162934 0.024665693897539427 0.29182604142363333 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 77156 10729 NRPPIASL True PC9_epitope_Rep5 866.49740098938 866.49630993586 46.261 2 -0.09591120536273681 0.024679269413692497 0.29186197893679117 ['ENSG00000118193|ENST00000367350|KIF14'] 118365 23229 TYNMVLNLL True PC9_epitope_Rep5 1079.56851732431 1079.56740993586 94.334 2 -0.09592685096675671 0.024679269413692497 0.29191093356701703 ['ENSG00000039123|ENST00000230640|MTREX'] 20755 15906 EQFHQFLEA True PC9_epitope_Rep2 1147.52982331647 1147.5287299358602 66.435 2 -0.09595958509472112 0.024679269413692497 0.2920133675199563 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF', 'DUS3L|p.E258Kfs*28|1|0.17|ENSG00000141994|chr19:5789335-5789335|C/-|frameshift_variant'] 142614 19938 YYMEKELANF True PC9_epitope_Rep3 1306.5903749676997 1306.58926993586 81.934 2 -0.09601678599766572 0.024679269413692497 0.2921923965738823 ['nc|ENSG00000105699|Q86X29-6|LSR', 'nc|ENSG00000105699|Q86X29-5|LSR', 'nc|ENSG00000105699|Q86X29-2|LSR', 'ENSG00000105699|ENST00000605618|LSR', 'nc|ENSG00000105699|Q86X29-3|LSR', 'nc|ENSG00000105699|Q86X29-4|LSR', 'nc|ENSG00000105699|Q86X29|LSR'] 116534 6827 TTTIAVEVK True NCI_RA007_Epitope_Rep1 960.54916177872 960.54806993586 30.562 2 -0.09603666270794456 0.024679269413692497 0.29225461678389053 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K382Rfs*43|1|0.28|ENSG00000115677|chr2:241255094-241255094|T/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 90735 4333 RERLEQQVP True NCI_RA007_Epitope_Rep3 1153.62036965637 1153.61872490379 23.793 3 -0.0960441787884092 0.024679269413692497 0.2922781457011484 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 109995 8820 TEILKSVVA True H1975_Epitope_Rep2 958.5698972232999 958.56880993586 38.893 2 -0.09607008922313055 0.024679269413692497 0.29235926308824894 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 100125 19540 SISSGGFYGV True PC9_epitope_Rep1 972.45526139388 972.45416993586 79.983 2 -0.09612866689859031 0.024679269413692497 0.2925426819311357 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 43891 7493 IHVPPTTENKP True NCI_RA007_Epitope_Rep4 1231.65608645875 1231.6544549037899 35.468 3 -0.09621060738583885 0.024679269413692497 0.2927993257806738 ['ENSG00000103769|ENST00000261890|RAB11A'] 48038 20255 IYLPYLQNW True NCI_RA007_Epitope_Rep5 1208.6229954253201 1208.62188993586 84.851 2 -0.09624336904171887 0.024679269413692497 0.29290196098983756 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 10008 9837 AYQKLSQLI True NCI_RA007_Epitope_Rep4 1062.6073453611798 1062.6062499358602 44.685 2 -0.09627092505655838 0.024679269413692497 0.2929882983004479 ['ENSG00000155530|ENST00000285928|LRGUK'] 116610 7095 TVAEKVDAV True PC9_epitope_Rep1 930.5022115862998 930.50110993586 32.1 2 -0.09627194146689504 0.024679269413692497 0.29299148305229894 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3', 'nc|ENSG00000185515|P46736|BRCC3', 'nc|ENSG00000185515|P46736-5|BRCC3'] 2164 10908 AELRAWIA True H1975_Epitope_Rep3 928.5130510535199 928.51194993586 47.045 2 -0.09627549725983457 0.024679269413692497 0.29300262463518223 ['ENSG00000142552|ENST00000270645|RCN3'] 5191 21122 ALMPVLNQV True PC9_epitope_Rep5 983.54738795691 983.54628993586 86.306 2 -0.0963519280752198 0.024691851289529936 0.29324214763235285 ['ENSG00000223496|ENST00000435634|EXOSC6'] 101394 16500 SLKLEDVAL True PC9_epitope_Rep4 986.5648118428599 986.56370993586 71.438 2 -0.09638535412045059 0.024691851289529936 0.29334692257148076 ['PDZD8|p.I1116*|1|0.13|ENSG00000165650|chr10:117283387-117283387|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 35053 8793 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42883496793 39.176 1 -0.09641749442362467 0.024691851289529936 0.29344768027020085 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 141322 2765 YTDSSYEEKKY True H1975_Epitope_Rep3 1411.61434078607 1411.61269490379 14.72 3 -0.09646480931673047 0.024691851289529936 0.293596032386416 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 85333 5987 QESPPAAAV True H1975_Epitope_Rep2 868.4290466460399 868.4279499358599 28.008 2 -0.09647553677572543 0.024691851289529936 0.29362967131038353 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 108779 16283 SYSTLTGSL True PC9_epitope_Rep4 927.45492704071 927.45382993586 70.589 2 -0.0964758334503605 0.024691851289529936 0.2936306016360809 ['ENSG00000115165|ENST00000264192|CYTIP', 'ENST00000483929.1_1_2:158291208-158300532:-|nuORF', 'ENST00000462109.1_1_2:158290860-158300532:-|nuORF'] 70624 25810 LWHIWRERN True NCI_RA007_Epitope_Rep2 1308.68397297244 1308.68233490379 109.33 3 -0.09654510810370161 0.024691851289529936 0.2938478657711876 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 68135 4810 LTDPRGAQAHY True H1975_Epitope_Rep3 1227.5996342117899 1227.5979749037901 23.629 3 -0.09656869254487092 0.024691851289529936 0.2939218464063555 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 2828 7272 AEVDAAMAA True NCI_RA007_Epitope_Rep3 847.3745685450299 847.3740149679301 35.714 1 -0.09662855456850786 0.024691851289529936 0.29410965461175126 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 61502 8110 LKEERRAQSV True PC9_epitope_Rep4 1214.67313350522 1214.67148490379 38.649 3 -0.09664422213103945 0.024691851289529936 0.2941588164984204 ['nc|ENSG00000135299|Q9Y2G4-4|ANKRD6', 'nc|ENSG00000135299|Q9Y2G4-3|ANKRD6', 'ENSG00000135299|ENST00000339746|ANKRD6', 'ENST00000479572.1_1_6:90331643-90337989:+|nuORF', 'ENST00000518253.5_1_6:90312741-90340720:+|nuORF'] 4289 14816 AIGSVQALI True H1975_Epitope_Rep2 870.5174677276199 870.51636993586 62.147 2 -0.09666211908873841 0.024691851289529936 0.2942149774819489 ['nc|ENSG00000123572|Q7Z2Y5-2|NRK', 'ENSG00000123572|ENST00000243300|NRK'] 6784 16659 AQEALTVLSLA True H1975_Epitope_Rep1 1114.62338934814 1114.6222899358602 69.469 2 -0.09667000594977458 0.024691851289529936 0.29423972783973906 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 33704 21547 GLHGVTLLYL True PC9_epitope_Rep1 1084.62808080576 1084.6269899358601 87.702 2 -0.09671222911192502 0.024691851289529936 0.2943722444714823 ['ADAMTS6|p.I158Tfs*17|1|0.07|ENSG00000049192|chr5:65460328-65460329|-/GTATAGTAAGG|frameshift_variant'] 109109 15369 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.57388993586 71.264 2 -0.09671450171869177 0.024691851289529936 0.2943793776239529 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 59772 9960 LGEGASLPP True H1975_Epitope_Rep1 839.4388830537499 839.43778993586 43.249 2 -0.09673974980519037 0.024691851289529936 0.2944586293827076 ['ENST00000313401.3_1_17:30816702-30816975:+|nuORF'] 97974 7147 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.41776993586 32.426 2 -0.09677194550946165 0.024708866827796976 0.2945597004438962 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 24655 18958 FALASHLIEA True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 78.285 2 -0.09684809418517601 0.024708866827796976 0.29479880207231557 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 70021 7330 LVMFQRRYYK True NCI_RA007_Epitope_Rep1 1402.7543610313799 1402.7527049037901 32.506 3 -0.09689097849677399 0.024708866827796976 0.2949334869290834 ['ENSG00000099194|ENST00000370355|SCD'] 49007 12030 KEFPGFLEN True NCI_RA007_Epitope_Rep2 1079.5287606873098 1079.52766993586 51.386 2 -0.09689458444304015 0.024708866827796976 0.2949448129835694 ['ENSG00000197747|ENST00000368811|S100A10'] 38870 6476 HHDSHSSVIL True PC9_epitope_Rep5 1130.5468703629401 1130.54521490379 29.882 3 -0.09691100764010731 0.024708866827796976 0.29499639922931736 ['ENSG00000129315|ENST00000261900|CCNT1'] 108978 3092 TAFYWCLRKRR True NCI_RA007_Epitope_Rep1 1498.7979571788599 1498.79632490379 15.913 3 -0.09697757612917918 0.024708866827796976 0.2952055283781323 ['nc|ENSG00000101384|P78504-2|JAG1', 'JAG1|p.A1131Pfs*19|1|0.19|ENSG00000101384|chr20:10639764-10639764|C/-|frameshift_variant', 'JAG1|p.N1187Tfs*25|1|0.07|ENSG00000101384|chr20:10639597-10639597|G/-|frameshift_variant', 'ENSG00000101384|ENST00000254958|JAG1'] 81286 15514 PLAAIAPS True PC9_epitope_Rep4 738.4275900940601 738.4270449679301 67.6 1 -0.09698547300235164 0.024726865999560588 0.2952303404753695 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 98276 9026 SEVGKLLSA True NCI_RA007_Epitope_Rep4 902.50729696674 902.50618993586 41.55 2 -0.09700769788123782 0.024726865999560588 0.2953001754452848 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF', 'WDR54|p.A261T|1|0.05|ENSG00000005448|chr2:74425220-74425220|G/A|missense_variant'] 53785 11299 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep1 1213.59004099497 1213.58894993586 48.439 2 -0.09702950308772135 0.024726865999560588 0.29536869753854134 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 73262 16308 MSELPEEVLEY True H1975_Epitope_Rep1 1337.6060846014898 1337.6049899358602 68.086 2 -0.0970392338063189 0.024726865999560588 0.29539927783746145 ['ENSG00000037637|ENST00000375592|FBXO42', 'ENST00000478089.1_1_1:16621266-16641853:-|nuORF'] 105183 15014 SRGDFVVEY True PC9_epitope_Rep5 1070.50327421546 1070.50277496793 62.754 1 -0.09706411317431454 0.02474140341067934 0.2954774703394533 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 133842 17216 VYGIRLEHF True PC9_epitope_Rep1 1132.60292868708 1132.60129490379 71.039 3 -0.09707370919421528 0.02474140341067934 0.2955076313392857 ['ENSG00000143228|ENST00000271452|NUF2', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF', 'ENST00000490881.5_1_1:163291794-163297702:+|nuORF'] 38323 9756 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.4604649679301 42.515 1 -0.09707618099727904 0.02474140341067934 0.29551540057947717 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 5709 22075 APALLLIPAA True PC9_epitope_Rep2 948.60080342876 948.60025496793 90.384 1 -0.09714449908084455 0.02474140341067934 0.29573016359286775 ['NRM|p.L63Pfs*21|1|0.23|ENSG00000137404|chr6:30690189-30690190|-/G|frameshift_variant', 'nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 97477 7852 SEEGNTMVP True H1975_Epitope_Rep2 962.40151156886 962.40096496793 35.153 1 -0.09714843103882849 0.02474140341067934 0.2957425257138525 ['ENSG00000135587|ENST00000258052|SMPD2'] 132362 6736 VVAAHLAGA True PC9_epitope_Rep5 807.46028720467 807.45918993586 30.881 2 -0.09718650009501657 0.02474140341067934 0.2958622249157609 ['ENSG00000160161|ENST00000291495|CILP2'] 101541 20919 SLLGGDVVSV True PC9_epitope_Rep5 944.51786165044 944.51731496793 85.521 1 -0.0971951573144252 0.02474140341067934 0.2958894479490495 ['nc|ENSG00000157514|Q99576|TSC22D3'] 68891 11183 LTNIPGNRVA True NCI_RA007_Epitope_Rep2 1053.59309227937 1053.59198993586 48.082 2 -0.09724412218521317 0.02474140341067934 0.2960434372995836 ['ENSG00000204316|ENST00000309352|MRPL38', 'nc|ENSG00000204316|Q96DV4-2|MRPL38'] 96760 7320 SANSHNIAL True PC9_epitope_Rep5 925.46174375665 925.46064993586 33.117 2 -0.09728364676794546 0.02474140341067934 0.2961677590138814 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 35092 7693 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 34.588 2 -0.09731498643470388 0.02474140341067934 0.29626634903574967 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 65850 21703 LSDLGVILS True PC9_epitope_Rep1 915.52769805815 915.52660993586 88.312 2 -0.09732676967620989 0.02474140341067934 0.2963034204519887 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-2|DQX1'] 103114 5718 SPHLGPAPA True PC9_epitope_Rep4 845.4395517600899 845.43844993586 28.815 2 -0.0974086917367336 0.02475840587812475 0.2965612026913854 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 72915 18860 MPVGLIAGA True PC9_epitope_Rep4 827.4575103233499 827.45640993586 80.631 2 -0.09740957030635929 0.02475840587812475 0.2965639677027881 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF', 'nc|ENSG00000214881|A8MWL7|TMEM14DP'] 80649 8450 PGSRTSLLLA True NCI_RA007_Epitope_Rep3 1013.5869442697699 1013.58584993586 40.319 2 -0.09741310313669577 0.02475840587812475 0.29657508622776374 ['ENSG00000136488|ENST00000316193|CSH1'] 116699 14387 TVDDDDDDNDP True H1975_Epitope_Rep2 1234.4109495219 1234.4098499358602 60.49 2 -0.09741728905192046 0.02475840587812475 0.29658826033561464 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'nc|ENSG00000085224|P46100-6|ATRX'] 128834 12683 VQDDPRLVHL True PC9_epitope_Rep1 1190.64077074778 1190.6391149037902 53.656 3 -0.09744665765313108 0.02475840587812475 0.2966806964799655 ['ENST00000473976.1_1_6:31937656-31938043:-|nuORF', 'ENST00000485557.5_1_6:31937656-31938645:-|nuORF', 'ENSG00000204348|ENST00000337523|DXO'] 44005 10484 IIGGKNSL True PC9_epitope_Rep2 800.47560291564 800.4745099358599 45.647 2 -0.09745222997448355 0.02475840587812475 0.29669823623909986 ['ENSG00000164099|ENST00000296498|PRSS12', 'PRSS12|p.K816Tfs*18|1|0.1|ENSG00000164099|chr4:118282117-118282118|-/TGTG|frameshift_variant'] 85178 21381 QENVLYIL True PC9_epitope_Rep1 990.5385970950199 990.5380449679301 87.074 1 -0.09746786353476036 0.02477787760806629 0.29674744731977637 ['ENSG00000122733|ENST00000242315|PHF24'] 119163 15890 VAISSLTYL True H1975_Epitope_Rep2 965.5433481222901 965.54224993586 66.322 2 -0.09752050113204112 0.02479536833699341 0.29691316066912216 ['ENSG00000068697|ENST00000175091|LAPTM4A'] 2799 5435 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 25.964 2 -0.09757059636092068 0.02479536833699341 0.29707090095560007 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 99427 20305 SIAASSIVTL True PC9_epitope_Rep4 960.54916177872 960.54806993586 86.246 2 -0.09763500782301167 0.02479536833699341 0.2972737644119817 ['ENSG00000205678|ENST00000381210|TECRL', 'TECRL|p.Y133C|1|0.36|ENSG00000205678|chr4:64322726-64322726|T/C|missense_variant'] 64897 11419 LQEDPPAGV True PC9_epitope_Rep5 924.4552613938798 924.45471496793 48.922 1 -0.0976371003105636 0.02479536833699341 0.29728035551828846 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 131063 6307 VTDSIRDEY True H1975_Epitope_Rep2 1096.5036681382799 1096.50307496793 29.196 1 -0.0976522115629889 0.02479536833699341 0.29732795585797045 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 140313 9148 YRDGHLVNL True PC9_epitope_Rep4 1085.56179215109 1085.5606899358602 42.779 2 -0.09768166668353875 0.02481483699666607 0.2974207471150186 ['ENST00000585105.5_1_17:73482215-73489290:+|nuORF', 'ENST00000581085.5_1_17:73467944-73489290:+|nuORF', 'ENSG00000177728|ENST00000314256|TMEM94', 'nc|ENSG00000177728|Q12767-3|TMEM94', 'nc|ENSG00000177728|Q12767-2|TMEM94'] 134740 12763 VYTSGVYHI True PC9_epitope_Rep2 1037.51819600361 1037.5170899358602 54.399 2 -0.09773230942912829 0.0248343048790226 0.2975803090640199 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 87044 13026 QNETGIAAL True PC9_epitope_Rep1 915.4661604307498 915.46506993586 54.974 2 -0.09782514103679048 0.0248737348531731 0.29787287631291576 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 111172 8302 THGPPVQL True PC9_epitope_Rep4 847.45520182423 847.45410993586 39.392 2 -0.09786285600572284 0.024891710082440066 0.2979917677429978 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 27858 18342 FQDPSVTQL True PC9_epitope_Rep2 1033.50802524273 1033.50747496793 75.882 1 -0.09786998775627095 0.024891710082440066 0.29801425153919586 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 97302 9910 SEALPSDIA True H1975_Epitope_Rep2 901.43927697657 901.43816993586 43.107 2 -0.09787389531582923 0.024891710082440066 0.29802657089878204 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 124862 17451 VHLETILGA True PC9_epitope_Rep5 951.5389314481898 951.53782993586 72.124 2 -0.09788674053650795 0.024891710082440066 0.2980670692922915 ['ENSG00000165591|ENST00000374900|FAAH2'] 38900 16428 HHFEQMLKL True PC9_epitope_Rep3 1181.6015487880898 1181.59990490379 68.327 3 -0.09792451317785389 0.024911174098766416 0.2981861701685093 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 120766 9731 VELAEAPVP True H1975_Epitope_Rep2 923.4963979298698 923.49530993586 42.416 2 -0.09796079755210935 0.024930139720558884 0.2983005943267917 ['ENSG00000177096|ENST00000321753|PHETA2'] 45047 8252 IPGTGFTVDA True PC9_epitope_Rep6 976.4865615221598 976.48546993586 41.334 2 -0.0980795547813653 0.024930139720558884 0.2986752088077717 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 3410 12906 AGIPQKPQGAP True PC9_epitope_Rep4 1062.5821932425 1062.58108993586 57.523 2 -0.09812214486673658 0.024948605871903878 0.2988095979967186 ['MAGEB1|p.G212Afs*13|1|0.77|ENSG00000214107|chrX:30251126-30251126|G/-|frameshift_variant', 'MAGEB1|p.P301Hfs*8|1|0.16|ENSG00000214107|chrX:30251393-30251393|C/-|frameshift_variant', 'ENSG00000214107|ENST00000397548|MAGEB1'] 73023 15186 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 63.42 2 -0.09815133862382738 0.024948605871903878 0.29890172864704856 ['PODXL|p.G363Efs*14|1|0.12|ENSG00000128567|chr7:131508964-131508964|C/-|frameshift_variant', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENSG00000128567|ENST00000378555|PODXL'] 72964 21006 MQFGELLAA True PC9_epitope_Rep4 978.4844533471799 978.48334993586 88.96 2 -0.0981569225001065 0.024948605871903878 0.29891935157926425 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16', 'nc|ENSG00000291110|Q309B1-2|TRIM16L'] 130913 11572 VTDELPLP True H1975_Epitope_Rep2 882.4698488288599 882.46930496793 49.576 1 -0.0982095766435459 0.024966571536911012 0.2990855481983267 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1'] 43650 11513 IHDFQPHVI True PC9_epitope_Rep2 1104.5716285588 1104.5705299358601 49.609 2 -0.09825675769784156 0.024966571536911012 0.29923449740422087 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 102947 10706 SPEEMQEPP True PC9_epitope_Rep5 1042.4277263167 1042.42662993586 46.17 2 -0.09826336265591094 0.024966571536911012 0.2992553511544673 ['nc|ENSG00000182606|Q9UPV9-2|TRAK1'] 63519 12992 LLYLC[Carbamidomethyl]GGDD True H1975_Epitope_Rep3 1024.4535474211498 1024.45297496793 55.207 1 -0.0982997171838632 0.024966571536911012 0.2993701420306673 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 700 6180 AAVDAGM[Oxidation]AM True NCI_RA007_Epitope_Rep4 851.35172530591 851.35062993586 30.381 2 -0.09837093422456025 0.025022448368751872 0.29959505770847245 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 71739 11103 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43170993586 47.742 2 -0.09838158497799272 0.025022448368751872 0.29962869974153306 ['ENSG00000026025|ENST00000544301|VIM'] 6592 15158 APVPGIPTA True PC9_epitope_Rep4 821.46470387877 821.46360993586 66.233 2 -0.09839116911122205 0.025022448368751872 0.2996589738294831 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 84447 17990 QAFVIFKEV True PC9_epitope_Rep6 1079.60153170475 1079.6004299358601 81.826 2 -0.09840199698436478 0.025022448368751872 0.2996931779042321 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'SNRPA|p.S64I|1|0.49|ENSG00000077312|chr19:40757449-40757449|G/T|missense_variant'] 136970 7290 YAHPSGTAL True PC9_epitope_Rep3 915.4450310633499 915.44392993586 33.048 2 -0.09841679520398872 0.025022448368751872 0.29973992609596445 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'AFAP1|p.G490V|1|0.32|ENSG00000196526|chr4:7786255-7786255|C/A|missense_variant'] 134062 7592 VYKDHQTITI True PC9_epitope_Rep4 1216.6451874218799 1216.6440899358602 36.584 2 -0.09842022552539713 0.025022448368751872 0.29975076299067976 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 14336 3848 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 21.041 2 -0.0984356935409343 0.025022448368751872 0.2997996304620818 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 16064 17465 EDYLSLILNR True NCI_RA007_Epitope_Rep2 1234.65575210558 1234.65464993586 72.668 2 -0.0984996014618605 0.025022448368751872 0.3000015618672972 ['CON__P02769'] 34678 18046 GQDGLYIGV True PC9_epitope_Rep6 920.4603467743199 920.45924993586 82.045 2 -0.09853820473307812 0.025040903467815956 0.3001235607164571 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'GATA6|p.S573C|1|0.32|ENSG00000141448|chr18:22200752-22200752|A/T|missense_variant'] 44089 9584 IINEPTAAA True PC9_epitope_Rep1 898.4759968384599 898.47488993586 41.721 2 -0.09853944538732667 0.025040903467815956 0.3001274818750518 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 100713 12923 SLDRQLTGL True PC9_epitope_Rep4 1001.55055876105 1001.54946993586 57.593 2 -0.09859733053154181 0.025040903467815956 0.30031045117565214 ['ENSG00000168434|ENST00000307149|COG7'] 48277 10868 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 47.12 3 -0.09861693468581566 0.025079308074459808 0.3003724268674543 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 26883 16738 FLDGNELTL True NCI_RA007_Epitope_Rep1 1020.51277627 1020.51166993586 69.232 2 -0.09863953647361474 0.025079308074459808 0.30044388470883354 ['ENSG00000213719|ENST00000375784|CLIC1'] 28757 17873 FSSPPVILL True H1975_Epitope_Rep1 971.5691689473099 971.5686249679301 74.439 1 -0.09866207462791755 0.025079308074459808 0.30051514729931567 ['ENSG00000171867|ENST00000379440|PRNP'] 85483 12558 QFPGNSVAP True PC9_epitope_Rep1 915.4450310633499 915.44392993586 53.174 2 -0.09875020876760181 0.02511720698254364 0.3007938723295732 ['ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 135098 8087 WEEAGPPSA True H1975_Epitope_Rep1 942.4083112014598 942.40720993586 36.051 2 -0.09878602561917076 0.02511720698254364 0.30090716928513594 ['ENSG00000101191|ENST00000395343|DIDO1'] 83578 16232 PVAPAVPTV True PC9_epitope_Rep2 849.49600400705 849.49490993586 67.681 2 -0.09880724781613227 0.02511720698254364 0.30097430702005523 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 111444 8001 THTQPGVQL True PC9_epitope_Rep3 979.5086939490698 979.50758993586 35.752 2 -0.09881102923904987 0.02511720698254364 0.3009862703349771 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 6522 6260 APTGDLPRA True PC9_epitope_Rep4 896.4715801643599 896.47048993586 31.128 2 -0.09885108906864765 0.025135151309621177 0.30111301810342084 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 59861 23091 LGFVALVLS True PC9_epitope_Rep2 917.5586042636099 917.55805496793 94.309 1 -0.09889926483290147 0.025135151309621177 0.30126546904094437 ['ENST00000409811.5_2_2:120015228-120020911:+|nuORF', 'nc|ENSG00000115107|Q658P3-3|STEAP3', 'nc|ENSG00000115107|Q658P3|STEAP3', 'ENSG00000115107|ENST00000393110|STEAP3'] 108489 14897 SYMGHFDLL True NCI_RA007_Epitope_Rep2 1081.49026700361 1081.4891699358602 62.621 2 -0.09892174431410596 0.025135151309621177 0.30133661397409894 ['ENSG00000169976|ENST00000367569|SF3B5'] 8944 14452 AVFVRGVGV True PC9_epitope_Rep3 902.5337864980997 902.53268993586 60.694 2 -0.09896752867593421 0.025135151309621177 0.30148153423321217 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 142520 15742 YYINKISSTL True PC9_epitope_Rep4 1200.63903941228 1200.6379499358602 68.475 2 -0.09902790793352301 0.025151587681506302 0.30167268848702306 ['ENST00000463527.5_1_1:155141918-155144917:-|nuORF', 'ENST00000490672.1_1_1:155141918-155142388:-|nuORF', 'ENST00000471891.5_1_1:155141918-155145146:-|nuORF', 'ENST00000497317.5_1_1:155141918-155145314:-|nuORF', 'ENST00000482246.5_1_1:155141918-155145739:-|nuORF', 'ENSG00000163463|ENST00000295682|KRTCAP2', 'nc|ENSG00000163463|Q8N6L1-2|KRTCAP2'] 120050 13407 VDSQILYY True H1975_Epitope_Rep1 999.49131254943 999.49020993586 56.683 2 -0.09910812541618544 0.025151587681506302 0.3019267135840675 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 115500 10252 TRQTGIVL True PC9_epitope_Rep1 886.5236157372198 886.52250993586 44.317 2 -0.09914760763859735 0.025151587681506302 0.30205176939273204 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 58332 5073 LEMQRKGP True NCI_RA007_Epitope_Rep3 957.5065857740898 957.5054899358599 26.947 2 -0.09916028077219088 0.025151587681506302 0.3020919140260253 ['nc|ENSG823|P61582|ERVK-7_np9'] 20307 13441 ENTLQLVRNI True NCI_RA007_Epitope_Rep1 1198.6669854956199 1198.6658899358602 56.286 2 -0.09916558288366417 0.025151587681506302 0.30210871005169626 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 35087 7788 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 34.78 2 -0.0992038482168137 0.025151587681506302 0.3022299365492469 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 18007 11478 EIEAELGI True H1975_Epitope_Rep2 872.4491133842798 872.4485649679301 49.206 1 -0.09924199692726468 0.025151587681506302 0.3023508103506755 ['nc|ENSG00000182938|Q7RTS5|OTOP3', 'ENSG00000182938|ENST00000328801|OTOP3'] 100995 7744 SLFSSKLST True NCI_RA007_Epitope_Rep4 968.5178616504401 968.51676993586 36.464 2 -0.09928622603699744 0.02518846476008137 0.3024909707758633 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-6|NDC1'] 1060 11587 AEAGFLAEA True H1975_Epitope_Rep3 877.4181476091699 877.4175949679301 49.698 1 -0.0993091494290575 0.02518846476008137 0.3025636230035177 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000487660.1_1_3:53268946-53276200:-|nuORF', 'ENST00000472528.5_1_3:53269083-53276224:-|nuORF'] 682 13249 AATTVLQEL True NCI_RA007_Epitope_Rep3 944.5178616504398 944.51676993586 59.391 2 -0.09932311367588453 0.02518846476008137 0.30260788353001034 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'nc|ENSG00000040341|Q9NUL3-4|STAU2', 'STAU2|p.K410Ifs*9|1|0.08|ENSG00000040341|chr8:73552313-73552314|-/A|frameshift_variant'] 6872 18557 AQIDGTLSTI True PC9_epitope_Rep3 1017.5342399905701 1017.5336749679301 76.6 1 -0.09932434810181016 0.02518846476008137 0.3026117962254156 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 37891 18857 GYSEHFVEF True PC9_epitope_Rep3 1113.47672511445 1113.47562993586 77.758 2 -0.09932453244465961 0.02518846476008137 0.3026123805288209 ['ENSG00000137198|ENST00000259727|GMPR', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2'] 2832 7480 AEVDAAMAA True NCI_RA007_Epitope_Rep5 847.3745685450299 847.37346993586 35.454 2 -0.09934315466900522 0.02518846476008137 0.30267140858117547 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 83579 16558 PVAPAVPTV True PC9_epitope_Rep3 849.49600400705 849.49490993586 68.831 2 -0.09940871449434995 0.025225836042036414 0.30287924937208405 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 75305 23645 NILEDLETL True PC9_epitope_Rep1 1058.54955570154 1058.5484499358602 95.74 2 -0.09942865950267998 0.025225836042036414 0.30294248972588145 ['ENSG00000095139|ENST00000264028|ARCN1'] 48006 10015 IYLEKLKTI True NCI_RA007_Epitope_Rep4 1119.69034670915 1119.68924993586 45.367 2 -0.09949566623510646 0.025225836042036414 0.3031549837000321 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 34772 9583 GQFTGSTGV True PC9_epitope_Rep2 852.3977465177599 852.39664993586 42.205 2 -0.09952062632231622 0.025225836042036414 0.30323415107374907 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 1904 13486 AEIGSMFTA True H1975_Epitope_Rep2 925.42151873745 925.4209649679301 57.006 1 -0.09952505367183252 0.025225836042036414 0.3032481943009478 ['ENST00000548443.2_14:19856929-19857043:-|nuORF'] 3073 14125 AFVTFDDHD True PC9_epitope_Rep4 1065.4403396057298 1065.43924993586 62.236 2 -0.09953911160622883 0.025244770583660692 0.30329278651859687 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'HNRNPA1L2|p.V159Sfs*3|1|0.45|ENSG00000139675|chr13:52642966-52642967|-/A|frameshift_variant', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 33056 12635 GILKNGLI True PC9_epitope_Rep3 826.5276384884999 826.52654993586 53.623 2 -0.09958388988827434 0.025244770583660692 0.30343483969092605 ['nc|ENSG00000062194|Q86WP2-4|GPBP1', 'nc|ENSG00000062194|Q86WP2-3|GPBP1', 'ENSG00000062194|ENST00000506184|GPBP1', 'nc|ENSG00000062194|Q86WP2-2|GPBP1'] 78525 21124 NYPPQYLILKL True PC9_epitope_Rep2 1360.77547331544 1360.77436993586 86.712 2 -0.09965324251113644 0.025284147557328017 0.3036548968121109 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 39445 10876 HLAAIVDAV True PC9_epitope_Rep5 907.51271670035 907.51160993586 46.822 2 -0.09969072127399685 0.025303078640931568 0.3037738403895875 ['ENSG00000128965|ENST00000617768|CHAC1', 'nc|ENSG00000128965|Q9BUX1-2|CHAC1'] 139676 20314 YNDTAGYFI True PC9_epitope_Rep6 1062.46582607758 1062.46472993586 90.845 2 -0.09969297682134634 0.025303078640931568 0.30378099916299744 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 2761 11493 AETLSSWEA True H1975_Epitope_Rep2 992.445090633 992.44398993586 49.263 2 -0.0997365381247853 0.025319484040750413 0.30391926763318045 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant', 'LTN1|p.L617Ffs*33|1|0.19|ENSG00000198862|chr21:28966643-28966643|A/-|frameshift_variant'] 67237 5803 LSRNLSEIK True NCI_RA007_Epitope_Rep4 1058.60840799034 1058.60730993586 28.946 2 -0.09979855231732677 0.025319484040750413 0.3041161448168728 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant'] 132355 5934 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 28.215 2 -0.09980786125510976 0.025319484040750413 0.3041457017765947 ['ENSG00000160161|ENST00000291495|CILP2'] 108440 15871 SYLPLAHMF True NCI_RA007_Epitope_Rep4 1077.53173789277 1077.53064993586 68.916 2 -0.09981689457605387 0.025319484040750413 0.3041743845599833 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 16082 8735 EEAENTLQSFR True NCI_RA007_Epitope_Rep2 1322.61025846514 1322.60967496793 38.624 1 -0.09983620751166328 0.025319484040750413 0.3042357104858817 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 118146 23857 TYIPPLLVAF True PC9_epitope_Rep2 1132.6532329244399 1132.65212993586 97.234 2 -0.09984400185337801 0.025319484040750413 0.30426046168616894 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 5765 6561 APASVPAQA True PC9_epitope_Rep5 810.4235673427798 810.42246993586 30.207 2 -0.09986353333415801 0.025319484040750413 0.304322487597566 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 23778 23627 EYGSIIAFF True PC9_epitope_Rep2 1045.51204799401 1045.5114749679299 96.352 1 -0.09988702851822337 0.025337905187193494 0.3043971067204047 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 127405 21382 VNEQLYIL True PC9_epitope_Rep1 990.5385970950199 990.53750993586 87.078 2 -0.0999020800803024 0.025337905187193494 0.304444912750637 ['ENSG00000115616|ENST00000233969|SLC9A2'] 57801 7204 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 32.645 2 -0.09991840813724139 0.025337905187193494 0.30449677601834524 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 138960 5454 YKKRLSVEL True NCI_RA007_Epitope_Rep1 1134.67609362734 1134.6744449037901 25.288 3 -0.09999999252234082 0.02537727009947571 0.3047559599306357 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 110984 4839 THAPATLEA True PC9_epitope_Rep4 909.45559574705 909.45448993586 25.198 2 -0.10002019763521322 0.02539669882784467 0.30482016078488827 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 57816 18300 LEESPEDSIQL True PC9_epitope_Rep6 1258.5928770654998 1258.59178993586 83.035 2 -0.10007202220995634 0.02541612678162065 0.30498485212493404 ['ENSG00000064989|ENST00000392370|CALCRL', 'CALCRL|p.I284Hfs*23|1|0.04|ENSG00000064989|chr2:187359122-187359123|-/GTATG|frameshift_variant'] 1695 8046 AEGLEPPAA True H1975_Epitope_Rep2 853.4181476091699 853.4175949679301 35.9 1 -0.10009447250439414 0.02543555396084998 0.30505620545142675 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 46825 11036 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1118.5277749905702 1118.5266699358601 47.412 2 -0.10011157096122844 0.02545447297081805 0.3051105529441574 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 103407 6186 SPPPPPPPP True NCI_RA007_Epitope_Rep5 881.4647038787699 881.46360993586 30.474 2 -0.10014263420810887 0.02545447297081805 0.3052092959758167 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 44635 21432 ILSDLELYL True H1975_Epitope_Rep2 1077.59577761797 1077.59527496793 88.674 1 -0.10016726947842966 0.02551274640728708 0.30528761363791607 ['ENST00000437184.5_1_2:33683166-33740095:+|nuORF', 'ENST00000425210.5_1_2:33718199-33740095:+|nuORF', 'ENST00000402538.7_1_2:33672919-33740095:+|nuORF'] 57383 6986 LEANKLQLQEK True NCI_RA007_Epitope_Rep2 1312.7350650554397 1312.73341490379 31.796 3 -0.1001711832060434 0.02551274640728708 0.3053000563453801 ['nc|ENSG00000167740|Q8WUJ1-3|CYB5D2', 'ENSG00000167740|ENST00000301391|CYB5D2'] 64368 18510 LPLLPAPGAAA True PC9_epitope_Rep6 989.5909670210498 989.58986993586 83.841 2 -0.10017186169699804 0.02551274640728708 0.3053022134533331 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 107032 4309 SVFQQGMKNK True NCI_RA007_Epitope_Rep4 1165.5913780272097 1165.58974490379 22.919 3 -0.10021735699191749 0.025531151592458244 0.30544686720945496 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000479960.1_1_1:116943772-116944278:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3'] 14272 10699 DSSVSEAISY True H1975_Epitope_Rep2 1056.46113461996 1056.46057496793 46.179 1 -0.10022583567105571 0.025531151592458244 0.30547382801122164 ['nc|ENSG00000198961|O43164-2|PJA2'] 95808 10640 RYIPTAAAF True NCI_RA007_Epitope_Rep2 1008.5392658013599 1008.5386749679301 45.987 1 -0.10022759687612912 0.025531151592458244 0.3054794284541465 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 1763 7474 AEGSTYVP True H1975_Epitope_Rep3 822.3759484440199 822.3753949679301 33.727 1 -0.10034562391246728 0.025547517984894682 0.3058548209722352 ['KIF5B-MET|1|fusion', 'ENSG00000170759|ENST00000302418|KIF5B'] 48036 19408 IYLPYLQNW True NCI_RA007_Epitope_Rep3 1208.6229954253201 1208.62188993586 84.696 2 -0.10035659554689594 0.025547517984894682 0.30588972487732186 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 39970 11293 HPLLGVSA True PC9_epitope_Rep3 792.4493881678001 792.4488349679301 48.444 1 -0.10036242667767431 0.025547517984894682 0.30590827591879843 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 34910 16819 GQMGSFIRL True PC9_epitope_Rep6 1007.5222358382299 1007.52112993586 77.201 2 -0.1003645733517123 0.025547517984894682 0.30591510539988115 ['ENSG00000119392|ENST00000309971|GLE1'] 109893 11124 TEFLFHTA True NCI_RA007_Epitope_Rep5 964.46543215476 964.46432993586 49.424 2 -0.1004003632251632 0.025547517984894682 0.3060289757621253 ['ENSG00000065308|ENST00000182527|TRAM2'] 101655 8488 SLLTDCNPADP True NCI_RA007_Epitope_Rep1 1144.50703926656 1144.5059499358601 37.016 2 -0.1004026994668537 0.025547517984894682 0.3060364093311577 ['nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000493707.1_1_3:23907959-23932094:+|nuORF', 'ENST00000475680.5_1_3:23852460-23932094:+|nuORF', 'nc|ENSG00000170142|P51965-2|UBE2E1', 'ENSG00000182247|ENST00000396703|UBE2E2', 'ENSG00000170035|ENST00000410062|UBE2E3', 'NR1D2-UBE2E2|2|fusion', 'NR1D2-UBE2E2|1|fusion'] 106655 15886 STTGMLTGV True PC9_epitope_Rep5 865.42151873745 865.4209649679301 66.095 1 -0.10040283237062676 0.025547517984894682 0.30603683221277 ['ENSG00000066084|ENST00000301180|DIP2B'] 46177 5828 ISLQYRSTLER True H1975_Epitope_Rep1 1364.7412130650398 1364.7395549037901 27.488 3 -0.10045006425170255 0.025565917423880122 0.30618713007989007 ['ENSG00000115904|ENST00000402219|SOS1', 'ENST00000395038.6_1_2:39249904-39249949:-|nuORF'] 103462 7935 SPPVPGPSA True PC9_epitope_Rep4 807.41266830591 807.41156993586 37.956 2 -0.10052178881487872 0.025565917423880122 0.3064154143604946 ['ENSG00000143756|ENST00000366862|FBXO28'] 115745 18116 TSCRYMTVLFY True H1975_Epitope_Rep2 1382.6362796142998 1382.6351899358601 75.073 2 -0.1005239948697121 0.025565917423880122 0.30642243668005753 ['ENSG00000178467|ENST00000383729|P4HTM'] 96449 7196 SAAHAIVSV True PC9_epitope_Rep6 853.46576650793 853.46466993586 36.768 2 -0.10069678218811884 0.02560424014186941 0.30697262180528767 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 8350 5964 ATLEGEAAP True H1975_Epitope_Rep3 857.4130622287298 857.4125149679301 27.952 1 -0.10071821410382079 0.02560424014186941 0.3070408878830195 ['ENST00000434408.1_3_22:41833373-41842568:-|nuORF', 'ENST00000327492.3_1_22:41833342-41842568:-|nuORF'] 134382 19886 VYPEYVIQY True PC9_epitope_Rep4 1172.57537652656 1172.5748749679299 84.624 1 -0.10072818772518868 0.02560424014186941 0.3070726581274301 ['ENSG00000059378|ENST00000263549|PARP12'] 21399 8109 ERIMKAQAL True PC9_epitope_Rep3 1058.5906497512199 1058.58954993586 36.167 2 -0.1007351077150927 0.02562314451373807 0.30709470189863347 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 132007 10891 VTSQLYAS True H1975_Epitope_Rep1 867.4337976733099 867.43324496793 46.854 1 -0.1007391018678341 0.02562314451373807 0.30710742559630877 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB'] 117025 8483 TVIAKVNNV True PC9_epitope_Rep1 956.5654805492 956.56438993586 37.466 2 -0.10078442490987596 0.025641536499840613 0.3072518181947683 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 111269 14832 THLGPLASL True PC9_epitope_Rep6 907.51271670035 907.51160993586 69.025 2 -0.10079710711181457 0.025641536499840613 0.3072922259085795 ['ENSG00000127399|ENST00000359623|LRRC61'] 47876 13784 IYIAGHPAF True PC9_epitope_Rep6 987.51780208079 987.51670993586 64.82 2 -0.10079856254237428 0.025641536499840613 0.3072968632786896 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 22895 8831 EVDSVVAAEY True H1975_Epitope_Rep1 1080.4975201286798 1080.49642993586 38.891 2 -0.10086678981915302 0.025659926287478832 0.3075142789149037 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 106708 8121 STVAQLVK True PC9_epitope_Rep3 844.5018176634799 844.50072993586 36.214 2 -0.10089453338354139 0.025659926287478832 0.3076027023099833 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF', 'ENST00000586523.1_1_18:43668039-43668150:-|nuORF'] 64925 18428 LQEEPGQLL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 75.674 2 -0.10090537051426347 0.025659926287478832 0.3076372443698374 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF', 'ENST00000566424.1_1_16:29468907-29469081:+|nuORF', 'ENST00000395400.4_1_16:29468907-29472819:+|nuORF', 'nc|ENSG00000181625|Q9BQ83-2|SLX1A', 'ENST00000561824.5_1_16:30205929-30212162:+|nuORF', 'ENSG00000181625|ENST00000330181|SLX1B', 'ENSG00000132207|ENST00000251303|SLX1A'] 103420 8773 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 38.697 2 -0.10106124633179565 0.025678313877046895 0.30813422299170595 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 98699 6724 [Acetylation]-SGFSTEER True H1975_Epitope_Rep3 953.4090397937499 953.4084949679301 30.82 1 -0.10110242051480188 0.025678313877046895 0.3082655431623543 ['ENSG00000180817|ENST00000373232|PPA1'] 142335 9966 YYEEQHPEL True PC9_epitope_Rep4 1206.5193182024198 1206.51822993586 45.994 2 -0.10111210272117636 0.025678313877046895 0.3082964261118325 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 100710 14487 SLDRQLTGL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 60.549 2 -0.10114125305668224 0.02573448859675331 0.30838941198578307 ['ENSG00000168434|ENST00000307149|COG7'] 5693 9453 APAKSLVGQVA True PC9_epitope_Rep1 1039.6025943339098 1039.6014899358602 41.217 2 -0.10114785929915267 0.02573448859675331 0.308410486356 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 27070 22446 FLFSKFIEL True PC9_epitope_Rep2 1142.6375828603 1142.63648993586 91.827 2 -0.10115145068432335 0.02573448859675331 0.30842194332361333 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 58386 5736 LENM[Oxidation]PSAEA True H1975_Epitope_Rep1 976.4171620134399 976.41606993586 27.133 2 -0.10117213919137796 0.02573448859675331 0.3084879449980546 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 77208 13094 NRSRIQVWL True PC9_epitope_Rep4 1170.6621748986997 1170.66052490379 58.259 3 -0.10121175406662103 0.02573448859675331 0.3086143397448215 ['ENSG00000182004|ENST00000414487|SNRPE'] 117680 21445 TVTSVLTSV True PC9_epitope_Rep1 905.50696261357 905.50586993586 87.327 2 -0.10122375761043975 0.02573448859675331 0.3086526414972416 ['ENSG00000106689|ENST00000373615|LHX2'] 65797 20584 LSDILQALI True PC9_epitope_Rep2 984.5855472874399 984.58444993586 84.609 2 -0.10123825749012723 0.02573448859675331 0.3086989108347038 ['ENSG00000106617|ENST00000287878|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-2|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-3|PRKAG2'] 28015 10800 FQNNVQVKV True PC9_epitope_Rep1 1074.5821932425 1074.58108993586 46.429 2 -0.10127055313482557 0.025747227145104443 0.30880197498765377 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550699.5_1_12:58109828-58111744:+|nuORF'] 8915 13739 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6965849037902 57.693 3 -0.10130390521379477 0.025747227145104443 0.30890842246349204 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 47848 10779 IYHNPTANSF True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 46.42 2 -0.10132961049294358 0.025747227145104443 0.30899047247050154 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 73427 21348 MTVDDLLSL True PC9_epitope_Rep6 1005.5052483614099 1005.50414993586 94.988 2 -0.10133013946292958 0.025747227145104443 0.30899216099276744 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 91656 15443 RISLPLPNF True NCI_RA007_Epitope_Rep5 1055.61276509479 1055.6116699358602 66.105 2 -0.10133383702970569 0.025747227145104443 0.30900396406111164 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 8655 18927 AVAELNYGL True PC9_epitope_Rep4 948.4916469026 948.49109496793 80.889 1 -0.10134278657373418 0.025747227145104443 0.3090325326759487 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 110605 12093 TFTFSHATF True NCI_RA007_Epitope_Rep4 1057.4868958753298 1057.48578993586 53.514 2 -0.10136485159160677 0.025747227145104443 0.3091029720601755 ['ENSG00000204713|ENST00000377199|TRIM27'] 35847 9978 GTLSSWNLK True NCI_RA007_Epitope_Rep2 1004.52909504048 1004.52798993586 43.44 2 -0.10136802251374864 0.025747227145104443 0.3091130952072741 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 36512 19288 GVGPVNISV True PC9_epitope_Rep2 840.4705175352 840.4699649679301 79.566 1 -0.10139240301322273 0.025747227145104443 0.30919093344153886 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 119685 6394 VAVLGASR True PC9_epitope_Rep3 771.46028720467 771.45918993586 29.619 2 -0.10140917684163857 0.025747227145104443 0.30924449004708743 ['ENST00000534336.1_1_11:65265902-65266112:+|nuORF'] 57872 10301 LEFKCRNILR True PC9_epitope_Rep3 1290.7230609030998 1290.72142490379 44.57 3 -0.10143703251468515 0.025747227145104443 0.30933343627279297 ['nc|ENSG00000067840|Q76G19-2|PDZD4', 'nc|ENSG00000067840|Q76G19|PDZD4', 'ENSG00000067840|ENST00000393758|PDZD4'] 6087 13126 APLRLIAA True PC9_epitope_Rep2 823.5279728416699 823.52686993586 55.762 2 -0.10144494880648003 0.025747227145104443 0.30935871540230553 ['ENSG00000112159|ENST00000369393|MDN1'] 27797 5404 FQDDDQTRV True PC9_epitope_Rep4 1122.4941660837399 1122.4930699358601 27.518 2 -0.1015228531349777 0.025747227145104443 0.3096075239538544 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 9204 12473 AVMGAYVLLK True NCI_RA007_Epitope_Rep4 1063.60998821347 1063.6088899358601 54.987 2 -0.10153552524374115 0.025747227145104443 0.3096480019909942 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000591406.1_1_18:56822908-56825914:+|nuORF'] 135480 15015 WIGGSILAS True H1975_Epitope_Rep3 902.48616759934 902.48561496793 63.147 1 -0.10155658251724531 0.025762522895596083 0.3097152682930682 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000428275.1_1_X:53172047-53172134:-|nuORF', 'ENST00000461125.1_1_3:179304300-179305795:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B', 'ENST00000484312.1_1_3:179298984-179304429:+|nuORF', 'ENSG00000181786|ENST00000324436|ACTL9', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104240622-104242055:-|nuORF', 'ENSG00000115073|ENST00000289228|ACTR1B'] 107548 8232 SVPEEFHTT True PC9_epitope_Rep2 1045.47163973401 1045.4705499358602 37.021 2 -0.10156011826082013 0.025762522895596083 0.3097265635027392 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 84285 17230 PYPPPPPEF True PC9_epitope_Rep6 1039.5014833103098 1039.50038993586 78.871 2 -0.10159489415583128 0.025762522895596083 0.3098376650392758 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 9150 14855 AVLDLVHSA True PC9_epitope_Rep4 923.50763131991 923.50652993586 65.078 2 -0.10160333732920938 0.025762522895596083 0.30986464114581946 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 54147 7557 KVPGCRRRRRE True H1975_Epitope_Rep3 1411.8055021707899 1411.8044099358601 34.049 2 -0.1016319980997195 0.025762522895596083 0.3099562186310999 ['ENST00000487849.7_1_17:46669689-46683672:+|nuORF', 'ENST00000491264.5_1_17:46679554-46683672:+|nuORF'] 24029 14094 EYNKSWQTF True PC9_epitope_Rep2 1201.5403880001697 1201.53928993586 59.486 2 -0.10166136771514699 0.025762522895596083 0.3100500702495577 ['ENSG00000198440|ENST00000333201|ZNF583'] 4040 14749 AHGVSLVL True PC9_epitope_Rep1 794.46503823194 794.46394993586 61.551 2 -0.101679943955395 0.025762522895596083 0.3101094360790951 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 120115 19643 VEAAIALQV True PC9_epitope_Rep2 912.5280324113199 912.52692993586 80.942 2 -0.1017222625635059 0.025762522895596083 0.3102446915317421 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 127697 8797 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.4914349679301 43.738 1 -0.10175232696516524 0.025762522895596083 0.310340792782247 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 90 12201 AAAPPLTL True H1975_Epitope_Rep2 752.4432401582001 752.44269496793 52.013 1 -0.10175423935579037 0.025779865825254315 0.3103469060934693 ['nc|ENSG00000105327|Q96PG8-1|BBC3', 'nc|ENSG00000105327|Q96PG8|BBC3'] 121100 10070 VERGQTKTI True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 43.606 2 -0.10180635873082007 0.025779865825254315 0.31051353051307584 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000412120.2_1_1:1853728-1858343:-|nuORF', 'ENST00000464311.5_1_1:1853728-1858229:-|nuORF'] 5901 8258 APGKGILAA True PC9_epitope_Rep5 796.4806882960798 796.47958993586 36.705 2 -0.10185055655082678 0.025779865825254315 0.3106548528242475 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 78003 19019 NVPEGLLATV True PC9_epitope_Rep6 1011.56006081559 1011.5594749679301 85.8 1 -0.10186644753782666 0.025779865825254315 0.31070566931198024 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 77221 7623 NRVEVGKDQEF True PC9_epitope_Rep1 1319.6469783270297 1319.64532490379 34.143 3 -0.10191640764249559 0.025779865825254315 0.31086545032063806 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 134741 12126 VYTSGVYHI True PC9_epitope_Rep4 1037.51819600361 1037.5170899358602 54.453 2 -0.1019498366497304 0.025798232343339438 0.3109723769997463 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'TNS2|p.L739Ffs*17|1|0.14|ENSG00000111077|chr12:53059858-53059858|G/-|frameshift_variant', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 91532 4802 RIFEPPPPK True NCI_RA007_Epitope_Rep5 1079.61276509479 1079.6116699358602 25.158 2 -0.10196930143402222 0.025798232343339438 0.31103464296258965 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 98961 6410 SHAQTVVL True PC9_epitope_Rep4 853.46576650793 853.46521496793 31.748 1 -0.10199628391299172 0.025798232343339438 0.31112096402014555 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 26148 13847 FGYQFTQQGPR True PC9_epitope_Rep2 1327.6309343400699 1327.62982993586 58.545 2 -0.1020001955770006 0.025817110553764084 0.3111334786760911 ['ENSG00000138594|ENST00000308580|TMOD3'] 28915 11882 FTDIDGQVY True H1975_Epitope_Rep1 1056.4763907612798 1056.47528993586 50.704 2 -0.10201144892069207 0.025817110553764084 0.3111694826116829 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 91412 16031 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.6067749037902 69.595 3 -0.10204124922958098 0.025853833293527584 0.3112648322358509 ['ENSG00000079246|ENST00000392132|XRCC5'] 64364 20568 LPLLPAPGAAA True PC9_epitope_Rep1 989.5909670210498 989.58986993586 83.928 2 -0.1020450938089859 0.025853833293527584 0.3112771341158875 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 119704 8382 VAVSGKGF True PC9_epitope_Rep4 763.4228390667898 763.42174993586 39.699 2 -0.10205019370549447 0.025853833293527584 0.31129345300188566 ['nc|ENSG00000165409|P16473-3|TSHR'] 67800 18611 LTAAATLSV True PC9_epitope_Rep6 845.48583324617 845.48472993586 84.23 2 -0.10212309324198289 0.025853833293527584 0.3115267507179028 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 87239 19252 QPLIGAIAA True PC9_epitope_Rep5 852.5069030439199 852.50580993586 79.094 2 -0.10216063843569345 0.025853833293527584 0.3116469273644572 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 107664 9110 SVQRSFTQV True PC9_epitope_Rep1 1050.54580773378 1050.54470993586 39.893 2 -0.1022305074665354 0.025853833293527584 0.31187060786505744 ['ENSG00000198911|ENST00000361204|SREBF2', 'nc|ENSG00000198911|Q12772-2|SREBF2', 'SREBF2-MEI1|1|fusion'] 6260 13137 APRAALVFA True PC9_epitope_Rep4 914.5337864980999 914.53268993586 58.426 2 -0.10229153429717076 0.02587219137460943 0.3120660232330228 ['ENSG00000170006|ENST00000304385|TMEM154'] 74894 10918 NHHMQSISF True PC9_epitope_Rep3 1099.4869129586702 1099.48580993586 46.977 2 -0.10231654529589741 0.02587219137460943 0.31214612294293353 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 121656 21104 VFIGNLNTL True PC9_epitope_Rep2 989.55458151233 989.55348993586 86.635 2 -0.10236340012491607 0.02587219137460943 0.31229619712777756 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'HNRNPC|p.N174Dfs*11|1|0.12|ENSG00000092199|chr14:21212990-21213002|CACTCTTAGAATT/-|frameshift_variant', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF', 'HNRNPCL2|p.R17H|1|0.1|ENSG00000275774|chr1:13116351-13116351|C/T|missense_variant'] 128249 17876 VPPAVTGITFL True H1975_Epitope_Rep1 1113.64339651673 1113.6422899358602 74.45 2 -0.1025258412086067 0.025891577774239772 0.31281666964281485 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 7121 7063 AQVRGGYVL True NCI_RA007_Epitope_Rep3 961.5345147740899 961.53340993586 34.899 2 -0.1025528186116431 0.02591096340225676 0.31290313412337045 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 76191 10404 NNISEGDGYV True H1975_Epitope_Rep2 1066.45671794586 1066.45562993586 45.032 2 -0.10257318979136607 0.02593034825870647 0.31296843027998184 ['SEZ6L2|p.E181D|1|0.15|ENSG00000174938|chr16:29895829-29895829|T/A|missense_variant'] 136734 21414 WYGYHFPEL True PC9_epitope_Rep1 1210.5447451046198 1210.54364993586 87.205 2 -0.10266832595309974 0.025949215951603915 0.3132734300442412 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant', 'ENST00000484998.5_1_20:2635830-2636687:+|nuORF', 'ENST00000480992.5_1_20:2635438-2636687:+|nuORF'] 138444 14175 YHKWRIYYKKR True PC9_epitope_Rep5 1639.9099501559897 1639.90831490379 59.534 3 -0.10267438977795237 0.025949215951603915 0.3132928734643662 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL', 'MLXIPL|p.P412Hfs*61|1|0.5|ENSG00000009950|chr7:73597550-73597550|G/-|frameshift_variant'] 14273 10647 DSSVSEAISY True H1975_Epitope_Rep3 1056.46113461996 1056.46057496793 46.028 1 -0.10271216896912273 0.02596859888961853 0.3134140196861227 ['nc|ENSG00000198961|O43164-2|PJA2'] 39467 15806 HLDATKLLL True PC9_epitope_Rep4 1022.61243074162 1022.61132993586 68.721 2 -0.10275471075789944 0.025984878631118185 0.31355045603379056 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 5828 8605 APFAAHGYGA True PC9_epitope_Rep2 960.4453654165198 960.44426993586 38.459 2 -0.10276824337799467 0.025984878631118185 0.3135938606645195 ['ENSG00000126067|ENST00000373237|PSMB2'] 98860 7345 SGTVDPQELQK True PC9_epitope_Rep1 1200.59863115228 1200.5975299358602 33.064 2 -0.10281738941498328 0.025984878631118185 0.3137515081909576 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 73753 7527 NADPQAVTM True NCI_RA007_Epitope_Rep5 945.42258136661 945.42148993586 35.638 2 -0.10284773210042449 0.025984878631118185 0.31384885215527064 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 90736 2630 RERLEQQVP True NCI_RA007_Epitope_Rep3 1153.62036965637 1153.61872490379 14.805 3 -0.10284872064637106 0.025984878631118185 0.31385202372357035 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 116969 18421 TVGLGTAAGV True PC9_epitope_Rep1 844.4654321547599 844.46432993586 75.648 2 -0.10285036798194042 0.025984878631118185 0.3138573089202218 ['ENST00000582193.5_2_17:37356602-37357495:+|nuORF', 'ENST00000579260.5_2_17:37356602-37356950:+|nuORF'] 38280 7605 HEENRRRTYCP True NCI_RA007_Epitope_Rep1 1459.6738788645498 1459.6722449037902 33.574 3 -0.10285268302884179 0.025984878631118185 0.31386473640336954 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|98|3|sense'] 47217 12252 IVAPGKGILAA True PC9_epitope_Rep6 1008.6331661861998 1008.63206993586 58.505 2 -0.1028674577616988 0.02600425777441754 0.31391214025361586 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 2163 10927 AELRAWIA True H1975_Epitope_Rep1 928.5130510535199 928.51194993586 46.993 2 -0.10291746316184582 0.02602363614659186 0.3140725965333102 ['ENSG00000142552|ENST00000270645|RCN3'] 109802 13388 TEEDPSLPAL True H1975_Epitope_Rep2 1070.5131701928199 1070.51257496793 56.631 1 -0.10304943010300326 0.026040423330946128 0.31449617457995166 ['ENSG00000068654|ENST00000263857|POLR1A'] 100690 10768 SLDNIVKL True PC9_epitope_Rep5 900.5280324113199 900.52692993586 46.411 2 -0.10305510955449791 0.026040423330946128 0.31451440814861253 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000463824.1_1_2:203748330-203749074:-|nuORF'] 97973 7053 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.41776993586 32.056 2 -0.10310556040578009 0.026040423330946128 0.3146763925724425 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 1313 4507 AEDRSLQAEP True H1975_Epitope_Rep2 1114.5254662120199 1114.52436993586 22.448 2 -0.10318423831497518 0.026040423330946128 0.3149290594136021 ['ENSG00000111816|ENST00000606080|FRK'] 126197 12567 VLGAFSDG True PC9_epitope_Rep6 764.37046914076 764.36992496793 59.783 1 -0.1031845374240021 0.026040423330946128 0.314930020097136 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 5727 8544 APAPLTSA True PC9_epitope_Rep5 726.39120458534 726.39065496793 37.809 1 -0.10321094200834892 0.026040423330946128 0.315014830449849 ['ENSG00000247596|ENST00000305533|TWF2'] 127615 9505 VPAAAAVAA True PC9_epitope_Rep3 739.42283906679 739.42229496793 41.509 1 -0.103232423347469 0.026059798285225488 0.3150838328844384 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 69947 16516 LVKVCYSWESY True H1975_Epitope_Rep1 1375.6482241969898 1375.6471299358602 68.902 2 -0.1033062541095222 0.026095950354045667 0.3153210287228168 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF'] 29911 18365 FVWSGTAEA True PC9_epitope_Rep2 966.4446967101799 966.44414496793 75.97 1 -0.10333202670591499 0.026095950354045667 0.3154038415187793 ['ENSG00000124422|ENST00000261497|USP22'] 105181 13499 SRGDFVVEY True PC9_epitope_Rep4 1070.50327421546 1070.50277496793 59.821 1 -0.10335048350014994 0.026095950354045667 0.31546315131016545 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 40486 8965 HRDLPIKL True PC9_epitope_Rep4 990.5974493838199 990.59634993586 42.033 2 -0.10337821065508186 0.026095950354045667 0.31555225744894694 ['ENSG00000136628|ENST00000366923|EPRS1'] 134327 16789 VYNYAEQTL True PC9_epitope_Rep3 1099.51858992643 1099.51748993586 69.726 2 -0.1033783451640631 0.026095950354045667 0.3155526897367765 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 18677 12549 ELAEQTLNNIK True PC9_epitope_Rep2 1271.6721304457099 1271.6710299358601 53.578 2 -0.10338149788367987 0.026095950354045667 0.3155628220676576 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 26540 12236 FIHQHFVEV True PC9_epitope_Rep4 1154.5872786229402 1154.5861899358601 54.884 2 -0.10339121840537063 0.026095950354045667 0.31559406289684394 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 106853 15658 SVASTITGV True PC9_epitope_Rep1 833.44944773745 833.44834993586 65.048 2 -0.10340090928927187 0.02611324357113025 0.315625209442134 ['ENSG00000147872|ENST00000276914|PLIN2'] 72909 11691 MPTTLEGA True PC9_epitope_Rep4 818.3844049527399 818.38385496793 52.732 1 -0.10343075546279196 0.02611324357113025 0.3157211412571388 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 47017 11013 ITRARFEEL True PC9_epitope_Rep5 1133.61930702721 1133.61766490379 47.351 3 -0.10343827805941325 0.02611324357113025 0.31574532189562243 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA6|p.S298F|1|0.15|ENSG00000173110|chr1:161525551-161525551|C/T|missense_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 12663 15365 DLDLGWPEVP True H1975_Epitope_Rep2 1139.54989005471 1139.5487899358602 64.26 2 -0.10346295212619566 0.02611324357113025 0.31582463831525404 ['ENSG00000125998|ENST00000374408|FAM83C', 'FAM83C|p.N530Qfs*40|1|0.45|ENSG00000125998|chr20:35287191-35287192|-/G|frameshift_variant'] 77247 7995 NRYDGIYKV True PC9_epitope_Rep6 1126.5771078620598 1126.5754649037901 40.217 3 -0.10347912166642768 0.02611324357113025 0.31587661976747994 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 80076 14217 PFLGAPAAT True PC9_epitope_Rep2 843.44905381463 843.44794993586 59.952 2 -0.10353695206444628 0.026150939644029033 0.3160625535343583 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant'] 131748 11006 VTPNATPGSM True PC9_epitope_Rep1 973.45388149489 973.45278993586 47.224 2 -0.1036127173015678 0.026150939644029033 0.3163062025317456 ['ENST00000425841.1_1_2:55451250-55451310:-|nuORF'] 140712 15704 YSAPEILL True H1975_Epitope_Rep3 904.4905842734399 904.49003496793 65.835 1 -0.10361793127284287 0.026150939644029033 0.3163229720001016 ['ENSG00000163788|ENST00000296088|SNRK', 'nc|ENSG00000163788|Q9NRH2-2|SNRK', 'ENST00000462810.1_1_3:43344695-43373803:+|nuORF'] 20327 21760 ENVLAIISL True PC9_epitope_Rep1 970.5698972233 970.5693449679301 88.533 1 -0.10362111919447999 0.026150939644029033 0.3163332253104893 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 142297 12564 YYDKHFTEF True PC9_epitope_Rep2 1248.54513902744 1248.5440499358601 53.636 2 -0.10368405110047293 0.026164062189351467 0.3165356544445212 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 139541 16550 YLTDRVMTV True PC9_epitope_Rep3 1096.5586809166 1096.55758993586 68.799 2 -0.10368453786273961 0.026164062189351467 0.31653722034012033 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3'] 21817 12388 ERYPYPVRL True PC9_epitope_Rep4 1191.6400424717897 1191.63838490379 55.456 3 -0.1036894464482794 0.026164062189351467 0.31655301120739554 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 114309 11908 TPQPPLLKA True PC9_epitope_Rep1 963.5753169569099 963.57420993586 50.67 2 -0.10371371687376864 0.026164062189351467 0.3166310925237085 ['ENSG00000155561|ENST00000285968|NUP205'] 134323 10075 VYNSWKNNKF True PC9_epitope_Rep5 1298.64077074778 1298.6391149037902 43.734 3 -0.10372312639907039 0.026164062189351467 0.3166613658861314 ['ENSG00000067596|ENST00000262415|DHX8'] 49565 13470 KFPELNYQL True NCI_RA007_Epitope_Rep4 1150.60225998074 1150.60116993586 59.016 2 -0.10373396842377743 0.026164062189351467 0.31669624916401445 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000478276.1_1_17:40481763-40483548:-|nuORF'] 114310 12060 TPQPPLLKA True PC9_epitope_Rep3 963.5753169569099 963.57420993586 51.43 2 -0.10375461956499556 0.026164062189351467 0.31676269574435484 ['ENSG00000155561|ENST00000285968|NUP205'] 74822 13462 NHDVQVIL True PC9_epitope_Rep5 936.50288029264 936.50178993586 56.8 2 -0.10383018136345092 0.026164062189351467 0.31700585849063906 ['ENSG00000179151|ENST00000315127|EDC3'] 141766 12036 YVADLVHSA True PC9_epitope_Rep3 973.4868958753299 973.48578993586 51.331 2 -0.10383772102687121 0.026164062189351467 0.3170301248044378 ['ENSG00000179820|ENST00000391770|MYADM'] 28675 18785 FSPDGQYLVTG True PC9_epitope_Rep5 1182.55570371114 1182.55460993586 77.269 2 -0.10386349535326096 0.026164062189351467 0.3171130835238553 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1'] 79446 6735 PAVFPAAR True NCI_RA007_Epitope_Rep4 827.4653725851099 827.46426993586 32.528 2 -0.10389503838964638 0.026164062189351467 0.3172146189339482 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 87451 8484 QPYYATRVN True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 37.574 2 -0.10393219975286763 0.026164062189351467 0.31733425241745117 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 135072 6323 WEDDKVTEA True H1975_Epitope_Rep2 1091.4771190372699 1091.4760299358602 29.254 2 -0.10394123878865341 0.026164062189351467 0.31736335388246595 ['ENSG00000144224|ENST00000272638|UBXN4'] 142923 21387 YYYINYTTI True PC9_epitope_Rep5 1212.5702911461199 1212.56918993586 87.327 2 -0.10399343549431034 0.026219536437005527 0.3175314190571581 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 133912 16796 VYIGSTLSYF True NCI_RA007_Epitope_Rep3 1148.5753765265601 1148.57426993586 73.918 2 -0.1040028955743801 0.026219536437005527 0.31756188198192387 ['nc|ENSG00000089041|Q99572-7|P2RX7', 'nc|ENSG00000089041|Q99572-5|P2RX7', 'nc|ENSG00000089041|Q99572-6|P2RX7', 'ENST00000539606.5_1_12:121592718-121615069:+|nuORF', 'nc|ENSG00000089041|Q99572-2|P2RX7', 'nc|ENSG00000089041|Q99572-4|P2RX7', 'nc|ENSG00000089041|Q99572-8|P2RX7', 'ENST00000538011.5_1_12:121592718-121622602:+|nuORF', 'ENSG00000089041|ENST00000328963|P2RX7'] 35602 16576 GTASGFYTV True PC9_epitope_Rep3 901.4181476091701 901.4175949679301 68.898 1 -0.10401528451905512 0.026219536437005527 0.3176017776759308 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 43962 5791 IIEAEESR True NCI_RA007_Epitope_Rep2 945.47672511445 945.47562993586 27.144 2 -0.10401851725166555 0.026219536437005527 0.31761218818971304 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF'] 35426 10628 GSEYLKLGY True H1975_Epitope_Rep2 1028.51786165044 1028.51676993586 45.904 2 -0.1040286465829832 0.026219536437005527 0.31764480881479923 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D', 'ENST00000462641.1_1_22:36907036-36908721:-|nuORF'] 84953 16250 QEELDTLFTTA True H1975_Epitope_Rep1 1266.5979624459399 1266.59686993586 67.855 2 -0.10404110190178441 0.026219536437005527 0.3176849215028578 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 35097 8100 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 36.134 2 -0.10405368871067437 0.026219536437005527 0.31772545925320056 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 6307 5671 APRLQSEVA True PC9_epitope_Rep4 969.5243440132099 969.52324993586 28.621 2 -0.10418768685026167 0.026219536437005527 0.31815712008274133 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 63841 13083 LNKQGCYTV True PC9_epitope_Rep3 1024.50116604048 1024.5000699358602 55.348 2 -0.10425614865317356 0.026238893195777924 0.31837773244083484 ['ENSG00000157570|ENST00000520358|TSPAN18'] 83674 9469 PVESDVEAP True H1975_Epitope_Rep3 941.4341915961298 941.43308993586 41.426 2 -0.10427848701028578 0.026256161551916044 0.3184497261124374 ['ENSG00000168143|ENST00000306858|FAM83B'] 126869 16036 VLQGAVPTV True PC9_epitope_Rep2 882.51746772762 882.51636993586 66.938 2 -0.10428130821217525 0.026256161551916044 0.3184588188427187 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 66666 10973 LSKTSVVDL True PC9_epitope_Rep1 960.54916177872 960.54806993586 47.097 2 -0.10428184481866809 0.026256161551916044 0.31846054833385606 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 6486 7161 APSPATAAATA True PC9_epitope_Rep3 927.4661604307499 927.46506993586 32.558 2 -0.10428903898096692 0.026256161551916044 0.3184837355113087 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 107342 13598 SVLGKVNEI True PC9_epitope_Rep1 957.54949613189 957.54838993586 57.161 2 -0.10433695154471728 0.026256161551916044 0.31863817358441493 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 57802 7297 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 33.006 2 -0.10440451292731105 0.026271860095389506 0.3188559854714614 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 2933 8006 AFAAGADIK True PC9_epitope_Rep1 862.45486747106 862.45376993586 35.616 2 -0.10440548346758351 0.026271860095389506 0.3188591147404576 ['ENSG00000127884|ENST00000368547|ECHS1'] 102982 16945 SPFGSITSA True PC9_epitope_Rep1 865.4181476091701 865.4175949679301 70.003 1 -0.10448359682963489 0.026271860095389506 0.31911100304564927 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 58530 11957 LEQHKGFMMEP True PC9_epitope_Rep5 1345.61587852289 1345.61422490379 50.99 3 -0.10449654595812846 0.026271860095389506 0.3191527653613087 ['ENSG00000105696|ENST00000262817|TMEM59L', 'ENST00000598660.1_1_19:18729161-18731343:+|nuORF'] 133459 18301 VVYQDGFYGA True PC9_epitope_Rep1 1117.50802524273 1117.5069299358602 75.183 2 -0.10458100268918753 0.026271860095389506 0.31942518839033895 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 78032 8528 NVSIGIVGK True NCI_RA007_Epitope_Rep2 885.52836676449 885.52726993586 37.817 2 -0.10458638947697153 0.026271860095389506 0.31944256638994867 ['ENSG00000129084|ENST00000396394|PSMA1', 'nc|ENSG00000129084|P25786-2|PSMA1'] 9303 6648 AVQMYENCLRK True H1975_Epitope_Rep1 1353.65332666077 1353.65167490379 30.626 3 -0.10459208838424357 0.026271860095389506 0.3194609516149291 ['ENSG00000198730|ENST00000361367|CTR9'] 101102 13977 SLGKQPYDLY True H1975_Epitope_Rep2 1182.5920892198599 1182.59098993586 58.909 2 -0.10460617213171748 0.026271860095389506 0.31950638853277946 ['ENSG00000102010|ENST00000348343|BMX'] 78214 7390 NYGDQVQHF True NCI_RA007_Epitope_Rep3 1106.47812209678 1106.4770299358602 36.195 2 -0.10464790591970714 0.026291210429045527 0.31964104148410083 ['ENSG00000154016|ENST00000284154|GRAP'] 109108 15286 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.57388993586 70.914 2 -0.10471151774421575 0.02631055999364095 0.3198463166885532 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 8596 20631 ATWLALNV True PC9_epitope_Rep3 886.4912529797799 886.49070496793 84.628 1 -0.10474283043706914 0.026328862394436166 0.31994737744849 ['ENST00000538588.2_1_7:99821243-99844125:-|nuORF', 'nc|ENSG00000291122|Q8NAP1|CASTOR3P', 'ENSG00000274070|ENST00000616305|CASTOR2'] 75079 16136 NHVISPLL True PC9_epitope_Rep3 891.5178020807899 891.51670993586 67.216 2 -0.10479983923667838 0.026328862394436166 0.32013139660325196 ['ENSG00000155096|ENST00000337198|AZIN1'] 58918 8022 LETIETPRP True H1975_Epitope_Rep2 1054.5658744720201 1054.56476993586 35.804 2 -0.1048342254418203 0.026328862394436166 0.32024240769011597 ['SLC39A6|p.A691Lfs*64|1|0.31|ENSG00000141424|chr18:36111103-36111104|-/AA|frameshift_variant', 'ENSG00000141424|ENST00000269187|SLC39A6'] 20470 21837 EPIPYEFMA True PC9_epitope_Rep1 1095.49468367771 1095.49417496793 88.805 1 -0.10489851760474725 0.026345068743542876 0.3204499974216033 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 32906 6620 GHVFEESQVAG True NCI_RA007_Epitope_Rep4 1158.53055159246 1158.5294499358602 32.09 2 -0.10491319362561902 0.026345068743542876 0.320497389819947 ['ENSG00000167658|ENST00000309311|EEF2'] 4777 14981 ALDSTNVEL True PC9_epitope_Rep6 960.47639076128 960.47584496793 69.636 1 -0.10493070685807267 0.026345068743542876 0.32055394704237467 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 48975 11664 KEFAAIVDV True NCI_RA007_Epitope_Rep4 990.5385970950198 990.53750993586 51.824 2 -0.10494478395586662 0.026345068743542876 0.3205994098104046 ['ENSG00000153066|ENST00000283033|TXNDC11', 'nc|ENSG00000153066|Q6PKC3|TXNDC11', 'ENST00000572732.1_1_16:11785059-11785929:-|nuORF'] 4807 6511 ALEEAGFK True NCI_RA007_Epitope_Rep1 863.4388830537498 863.43778993586 29.343 2 -0.10494920005868602 0.026345068743542876 0.32061367226267995 ['nc|ENSG00000162909|P17655-2|CAPN2', 'ENSG00000162909|ENST00000295006|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000498027.5_1_1:223958187-223959968:+|nuORF', 'ENST00000472601.5_1_1:223957560-223960168:+|nuORF'] 23886 14210 EYIRSLNQF True PC9_epitope_Rep6 1168.58767254576 1168.58656993586 66.545 2 -0.1049544847213095 0.026345068743542876 0.3206307401094467 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 126688 24203 VLPDMFFSF True PC9_epitope_Rep5 1101.5205045027299 1101.51940993586 98.094 2 -0.10501684702175847 0.026345068743542876 0.32083217211436027 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 133902 23004 VYIDFPGGILS True PC9_epitope_Rep1 1179.6175756917098 1179.61646993586 93.28 2 -0.10504079738283263 0.02636388922001033 0.3209095426532988 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 87175 18242 QPGEAWKELQV True PC9_epitope_Rep3 1283.65100107831 1283.64990993586 75.379 2 -0.10504587187453243 0.02636388922001033 0.320925936290638 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant'] 38537 3425 HESGHAIIA True H1975_Epitope_Rep1 933.4668291370899 933.4657299358599 17.368 2 -0.10511544576636653 0.02642244119516847 0.32115072705162423 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 28756 14825 FSSPPVIL True H1975_Epitope_Rep3 858.4851049701799 858.4845549679301 62.405 1 -0.10514035828786884 0.02642244119516847 0.32123123009293475 ['ENSG00000171867|ENST00000379440|PRNP'] 132230 16968 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.49037496793 70.287 1 -0.10516639797899123 0.026481514591652263 0.3213153820189678 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 1449 6628 AEEGPGVPAA True H1975_Epitope_Rep3 896.4239612655998 896.4234149679301 30.447 1 -0.10519731252469551 0.026498222195737244 0.32141529655169243 ['ENSG00000103335|ENST00000301015|PIEZO1'] 31920 9677 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 42.203 2 -0.1052263913900388 0.026498222195737244 0.3215092867961977 ['ENSG00000100726|ENST00000262319|TELO2'] 37082 20565 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49070496793 87.254 1 -0.10522688747132034 0.026498222195737244 0.3215108903282241 ['ENSG00000010292|ENST00000315579|NCAPD2'] 75849 11207 NLPSIQQAP True PC9_epitope_Rep1 966.5134449763399 966.51234993586 47.989 2 -0.10523005753305367 0.026498222195737244 0.32152113728563225 ['ENSG00000253537|ENST00000518325|PCDHGA7'] 76927 8706 NRDQYSHLL True PC9_epitope_Rep2 1144.56252042708 1144.5614299358601 38.85 2 -0.1052312906260922 0.026498222195737244 0.3215251231815658 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 22842 8924 EVANSVGLTG True PC9_epitope_Rep1 945.4767251144499 945.47562993586 39.167 2 -0.10526374488063586 0.026498222195737244 0.32163003487908715 ['GRIN2B|p.A794Lfs*16|1|0.52|ENSG00000273079|chr12:13567243-13567243|C/-|frameshift_variant', 'ENSG00000273079|ENST00000609686|GRIN2B'] 24205 15950 EYRPEFSNF True PC9_epitope_Rep4 1187.5247379360299 1187.52364993586 69.281 2 -0.1053031197612515 0.026516505780002385 0.32175733205067497 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 78527 20416 NYPPQYLILKL True PC9_epitope_Rep4 1360.77547331544 1360.77436993586 86.676 2 -0.1053251500994294 0.026516505780002385 0.32182856173229146 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 87237 19335 QPLIGAIAA True PC9_epitope_Rep1 852.5069030439199 852.50580993586 79.178 2 -0.10533426362780604 0.026516505780002385 0.3218580294724751 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 96968 8719 SAYDGKDYIA True PC9_epitope_Rep6 1101.49785448185 1101.4967499358602 43.397 2 -0.1053672334372236 0.026555175975212522 0.32196464103874595 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 71164 10320 LYMKNGQGF True PC9_epitope_Rep2 1056.5062514209196 1056.5051499358601 45.024 2 -0.1053805152122376 0.026555175975212522 0.32200759214243774 ['nc|ENSG00000127314|P61224-4|RAP1B', 'ENST00000494982.1_1_1:112233982-112249293:+|nuORF', 'nc|ENSG00000127314|P61224-3|RAP1B', 'nc|ENSG00000254893|A6NIZ1|RAP1BL', 'ENSG00000127314|ENST00000250559|RAP1B', 'ENSG00000116473|ENST00000369709|RAP1A'] 78661 12616 NYVKDLSRL True PC9_epitope_Rep2 1106.6084079903399 1106.60730993586 53.838 2 -0.10543333054093124 0.026593843098311816 0.3221784053643429 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL', 'CTDSPL|p.G202R|1|0.1|ENSG00000144677|chr3:37975793-37975793|G/A|missense_variant', 'ENST00000497677.5_1_2:219264813-219268311:+|nuORF', 'ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 114036 7841 TPDAPGSPEA True H1975_Epitope_Rep3 940.4137905047199 940.41268993586 35.137 2 -0.10549748270717993 0.026593843098311816 0.3223859202832704 ['ENST00000420190.6_3_1:859345-859660:+|nuORF'] 98964 7784 SHAQTVVL True PC9_epitope_Rep5 853.46576650793 853.46521496793 34.886 1 -0.10550917765847574 0.0266131755079343 0.3224237546053868 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 38457 7344 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 33.629 2 -0.10551532301234162 0.026630920464700624 0.3224436359648768 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 134060 7555 VYKDHQTITI True PC9_epitope_Rep4 1216.6451874218799 1216.6435349037902 36.436 3 -0.10552652921373361 0.026630920464700624 0.32247989104974223 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 70536 13378 LVYEGQLSQA True PC9_epitope_Rep6 1106.56078909158 1106.5596899358602 63.127 2 -0.10553133157660873 0.026630920464700624 0.3224954283628556 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 2665 4527 AESPDARRPLP True H1975_Epitope_Rep2 1207.6309343400699 1207.62928490379 22.524 3 -0.10555224818899155 0.026630920464700624 0.3225631034872292 ['ENST00000552943.5_1_16:699416-703842:+|nuORF'] 85717 14330 QHAEPWVV True PC9_epitope_Rep3 964.4766655447999 964.47556993586 60.206 2 -0.10558001712198013 0.026647604296975835 0.3226529556702879 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 77037 6753 NRISHGEVL True PC9_epitope_Rep5 1023.5461420869499 1023.54504993586 30.947 2 -0.10558329766151038 0.026647604296975835 0.322663571035465 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 9169 16565 AVLGAVVTA True PC9_epitope_Rep5 799.48035394291 799.47924993586 68.722 2 -0.10558388577432475 0.026647604296975835 0.32266547409697083 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 39546 6892 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 35.421 2 -0.10559407195267116 0.026647604296975835 0.3226984358629967 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 131572 20828 VTLGPVPEI True PC9_epitope_Rep2 923.53278343859 923.5322349679301 85.558 1 -0.10561952221491822 0.026647604296975835 0.32278079554270606 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 62032 12133 LLDRLRVPP True H1975_Epitope_Rep3 1077.66586329681 1077.66476993586 51.838 2 -0.10565228758361245 0.026647604296975835 0.3228868369063405 ['ENST00000468819.1_1_3:195606029-195638730:-|nuORF'] 109662 5667 TEAREAALP True H1975_Epitope_Rep2 956.4927095317598 956.49160993586 26.795 2 -0.10565877374356913 0.02666693141654422 0.3229078298532342 ['ENST00000314845.7_1_11:46418495-46418936:-|nuORF'] 103764 13509 SPVSLQGNI True PC9_epitope_Rep5 913.48689587533 913.48578993586 56.982 2 -0.10568529927660571 0.026682549136390708 0.32299368598365646 ['ENST00000524669.5_1_11:57416538-57416754:-|nuORF'] 6883 17636 AQIEAKFYEEV True PC9_epitope_Rep5 1325.6503323719699 1325.6492299358601 72.849 2 -0.10569898004309511 0.026682549136390708 0.3230379696651837 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 21887 6600 ESDINSVRY True H1975_Epitope_Rep2 1081.50400249145 1081.5034749679298 30.297 1 -0.10572062247273575 0.026682549136390708 0.3231080283881155 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000559541.1_1_15:52416976-52428016:-|nuORF'] 44646 8175 ILSGVVTK True PC9_epitope_Rep1 815.51165407119 815.51054993586 36.277 2 -0.10572453057102975 0.026682549136390708 0.3231206797782326 ['ENSG00000142534|ENST00000270625|RPS11'] 88717 11365 QTHSVFVNV True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 51.489 2 -0.10574560086055194 0.026682549136390708 0.32318889157058905 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 103111 6861 SPHLGPAPA True PC9_epitope_Rep1 845.4395517600899 845.43844993586 31.195 2 -0.10576633248570066 0.026682549136390708 0.32325601117449176 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 47707 16269 IYAPPLPSL True NCI_RA007_Epitope_Rep4 969.55351888317 969.55242993586 70.556 2 -0.10580114861043566 0.026682549136390708 0.32336873933538096 ['ENSG00000121057|ENST00000337714|AKAP1'] 84384 8624 QAAHLIQAL True NCI_RA007_Epitope_Rep3 963.55016483823 963.54906993586 40.999 2 -0.10580730161883645 0.026682549136390708 0.32338866285222373 ['ENSG00000136463|ENST00000258975|TACO1'] 105525 12433 SSAPGLTSV True PC9_epitope_Rep1 817.4181476091701 817.41704993586 52.686 2 -0.1058271135624374 0.026719072574241703 0.32345281664860076 ['ENSG00000115216|ENST00000379852|NRBP1'] 69659 7032 LVDSNNPKI True PC9_epitope_Rep2 998.53965972418 998.53856993586 32.45 2 -0.10584476536184198 0.026719072574241703 0.3235099787872834 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 27746 10415 FPSAAATAA True PC9_epitope_Rep5 805.39701824177 805.39592993586 45.046 2 -0.10589657945105801 0.026719072574241703 0.3236777866085235 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 114308 15320 TPQKLPSL True PC9_epitope_Rep4 882.5174677276199 882.51636993586 66.86 2 -0.10592070404046308 0.026719072574241703 0.32375592657756735 ['ENSG00000185009|ENST00000355264|AP3M1'] 39980 9097 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.44828993586 45.074 2 -0.1059275038157166 0.026719072574241703 0.3237779521796753 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 41320 19476 HVVGLLTTL True PC9_epitope_Rep2 951.5753169569101 951.57420993586 80.294 2 -0.10594264285031126 0.026719072574241703 0.32382699162417417 ['ENSG00000149932|ENST00000279396|TMEM219'] 54126 16288 KVPEIEVTV True PC9_epitope_Rep5 1012.5804619069999 1012.57936993586 67.645 2 -0.10605073397603106 0.026756649464073044 0.3241771920428411 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 31803 10178 GEIGLGTPP True H1975_Epitope_Rep2 839.43888305375 839.43833496793 44.151 1 -0.10613136041499917 0.026756649464073044 0.32443848350434956 ['ENSG00000131400|ENST00000253719|NAPSA'] 85381 4499 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 22.417 2 -0.10615679112541626 0.026756649464073044 0.32452091138722405 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 116390 13532 TTIEAIHGL True PC9_epitope_Rep4 953.51819600361 953.51708993586 59.946 2 -0.10617217910315338 0.026756649464073044 0.3245707910268491 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67955470-67955572:-|nuORF'] 133964 11934 VYINTAQEF True NCI_RA007_Epitope_Rep4 1083.5236753068698 1083.52256993586 52.904 2 -0.10618952790742119 0.02677490423357085 0.3246270293326064 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 73283 16300 MTAKLSTSFVL True PC9_epitope_Rep6 1196.647495921 1196.64586490379 75.061 3 -0.10619268462358655 0.02677490423357085 0.3246372625291761 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 63065 13004 LLQGISDVP True PC9_epitope_Rep1 940.52294703088 940.52184993586 54.891 2 -0.10620357787496414 0.02677490423357085 0.3246725761526121 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 87177 9686 QPGLYTVS True H1975_Epitope_Rep3 863.43888305375 863.43833496793 42.277 1 -0.10627715127873497 0.026831252852805177 0.3249111152125705 ['ENSG00000135605|ENST00000381501|TEC'] 142676 14244 YYPSTPGRYSI True PC9_epitope_Rep2 1302.6244519773 1302.6238749679299 60.057 1 -0.10629540505930832 0.026831252852805177 0.3249703054403203 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 89070 13896 QVMQGMGVSA True PC9_epitope_Rep3 1006.4575869763398 1006.45707496793 58.529 1 -0.10633840840004176 0.026831252852805177 0.32510976181495843 ['ENSG00000169813|ENST00000682386|HNRNPF'] 53079 4303 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 22.964 2 -0.10640448722393246 0.026831252852805177 0.32532408434012733 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 1348 6583 AEEAARKLLP True H1975_Epitope_Rep3 1096.62405805448 1096.62296993586 30.278 2 -0.10643296692159929 0.026831252852805177 0.32541646922128015 ['nc|ENSG00000088298|Q9BV94-2|EDEM2', 'ENSG00000088298|ENST00000374492|EDEM2'] 116739 11892 TVDNARIVL True PC9_epitope_Rep4 999.5712942056299 999.57018993586 53.517 2 -0.10646207273714668 0.026831252852805177 0.325510893093146 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 79018 9254 PALASQVTG True PC9_epitope_Rep1 842.4497820906199 842.44868993586 40.448 2 -0.10656017300504564 0.026889188760120655 0.3258292048842714 ['ENST00000310442.4_2_11:66303863-66304043:-|nuORF'] 54434 15116 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.6997499358602 66.959 2 -0.10657989475581434 0.026889188760120655 0.32589320819538353 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 86910 21507 QLSLAQLI True PC9_epitope_Rep2 884.5331177917599 884.53256496793 88.195 1 -0.10662492686120043 0.026889188760120655 0.32603936534713146 ['ENSG00000117971|ENST00000261751|CHRNB4', 'CHRNB4|p.S218Kfs*224|1|0.08|ENSG00000117971|chr15:78629652-78629653|-/T|frameshift_variant', 'nc|ENSG00000117971|P30926-2|CHRNB4', 'ENST00000560511.5_1_15:78923416-78927882:-|nuORF'] 9559 6822 AWAPKPYHKF True PC9_epitope_Rep6 1243.6502132326698 1243.64857490379 35.102 3 -0.10674687467880602 0.026904228090712485 0.3264352575645479 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 38466 6444 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 33.414 2 -0.10675481327337111 0.026904228090712485 0.3264610343145804 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 33146 11760 GITFIAAK True PC9_epitope_Rep2 819.4854393233499 819.48434993586 50.568 2 -0.10675846636681229 0.026904228090712485 0.3264728961690429 ['ENSG00000117984|ENST00000236671|CTSD'] 97910 4003 SEMRAPPAA True NCI_RA007_Epitope_Rep3 928.4436511643598 928.44254993586 22.167 2 -0.10676161218183454 0.026904228090712485 0.3264831109546801 ['ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF'] 93566 4520 RQLPSSHAL True NCI_RA007_Epitope_Rep4 1007.55122746739 1007.55012993586 23.781 2 -0.1067839950838853 0.026904228090712485 0.32655579322401435 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF', 'ENST00000460863.1_1_2:114500256-114501404:-|nuORF'] 20960 13431 EQPYKWEKF True PC9_epitope_Rep5 1253.6080736371698 1253.6069699358602 56.678 2 -0.10682522328646553 0.026904228090712485 0.3266896826711758 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 97479 6381 SEEHNTWEP True H1975_Epitope_Rep3 1127.45196691859 1127.45086993586 29.522 2 -0.10682843031702934 0.026904228090712485 0.32670009823708024 ['ENSG00000094916|ENST00000209875|CBX5'] 105949 5645 SSSISSFKDPK True PC9_epitope_Rep5 1181.59281749585 1181.59117490379 26.714 3 -0.10683280468617945 0.026904228090712485 0.3267143051574906 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1'] 90542 8511 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64349490379 39.422 3 -0.10684736832417345 0.026904228090712485 0.3267616057131595 ['ENSG00000127540|ENST00000591899|UQCR11'] 118310 13109 TYLSINSTSI True PC9_epitope_Rep4 1097.5604547384103 1097.5593499358602 58.317 2 -0.10688209115815946 0.026920864165691272 0.3268743883784564 ['NLRP11|p.C698S|1|0.21|ENSG00000179873|chr19:55801650-55801650|C/G|missense_variant'] 109744 3071 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 16.198 2 -0.10697775546708783 0.026920864165691272 0.32718517229967925 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 114417 14660 TPTPVPVV True PC9_epitope_Rep4 808.4694549060399 808.46834993586 64.323 2 -0.10698906117688249 0.026920864165691272 0.3272219067143712 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'U2AF2|p.A131S|1|0.29|ENSG00000063244|chr19:55661094-55661094|G/T|missense_variant'] 139989 5273 YQDPHSTAV True PC9_epitope_Rep5 1016.45632402304 1016.45522993586 25.299 2 -0.10700461412701553 0.026920864165691272 0.3272724431715821 ['ENSG00000146648|ENST00000275493|EGFR'] 65531 9633 LRRAEEYLI True PC9_epitope_Rep6 1161.6506071554898 1161.64897490379 47.397 3 -0.10700709332392985 0.026920864165691272 0.32728049907516266 ['ENST00000510457.1_1_4:48091737-48136211:-|nuORF', 'ENSG00000074966|ENST00000264316|TXK'] 4268 6298 AIERVTCHAVP True NCI_RA007_Epitope_Rep2 1194.61792712822 1194.61627490379 29.103 3 -0.10704741800272004 0.026920864165691272 0.3274115381380597 ['ENST00000563562.5_1_16:68349816-68371418:+|nuORF'] 104486 8586 SQLSMKAAL True NCI_RA007_Epitope_Rep4 947.51100244819 947.50990993586 39.809 2 -0.10709902244026558 0.02693909938504265 0.32757925395974596 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 106856 15594 SVASTITGV True PC9_epitope_Rep5 833.44944773745 833.44834993586 64.991 2 -0.107121347308237 0.02693909938504265 0.3276518180518299 ['ENSG00000147872|ENST00000276914|PLIN2'] 5072 23545 ALLDWVTSV True PC9_epitope_Rep5 1002.53859709502 1002.53750993586 95.55 2 -0.10712243934319382 0.02693909938504265 0.3276553676887122 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 85982 11549 QHLAQLQQL True PC9_epitope_Rep4 1077.59309227937 1077.59198993586 52.185 2 -0.10716294615039873 0.026957867174482265 0.327787042037329 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.Q1101Lfs*31|1|0.16|ENSG00000119596|chr14:74798598-74798599|-/T|frameshift_variant', 'YLPM1|p.V675Cfs*24|1|0.33|ENSG00000119596|chr14:74782066-74782066|G/-|frameshift_variant'] 111643 16249 TIDVAAVTAV True PC9_epitope_Rep1 958.53351171458 958.53240993586 67.32 2 -0.10723638989021259 0.026957867174482265 0.3280258223265955 ['nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 38460 6841 HEPEPHIL True PC9_epitope_Rep4 970.4872302285 970.48612993586 33.535 2 -0.10727087563929516 0.02697663347482842 0.3281379596133889 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 52389 9034 KKLPPLPSL True NCI_RA007_Epitope_Rep5 991.64300259391 991.64190993586 41.406 2 -0.10728444376309927 0.02697663347482842 0.32818208208485294 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 212 9559 AAFGGTFKKV True PC9_epitope_Rep3 1024.5705659296398 1024.56946993586 41.721 2 -0.10731586628547991 0.02699593374987603 0.3282842721830632 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 752 16132 AAVPGKTFVNI True PC9_epitope_Rep3 1115.63389446219 1115.63278993586 67.2 2 -0.1073503331314526 0.027010411502231036 0.328396373290905 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 131732 19563 VTPGSGYLSL True PC9_epitope_Rep5 992.51786165044 992.51676993586 80.299 2 -0.10737602917431635 0.027010411502231036 0.3284799550742606 ['ENST00000262644.8_1_8:57872809-57872962:-|nuORF'] 35172 16328 GQYFGELAL True NCI_RA007_Epitope_Rep4 996.4916469025998 996.49054993586 70.803 2 -0.10744085440933888 0.027010411502231036 0.3286908397956438 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A', 'ENSG00000005249|ENST00000265717|PRKAR2B'] 50002 11642 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.55447496793 49.66 1 -0.10746368884464877 0.027010411502231036 0.3287651323168206 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF', 'RPL5|p.P139Vfs*24|1|0.12|ENSG00000122406|chr1:92836277-92836280|CAGC/-|frameshift_variant'] 117723 19507 TVVATVLAT True PC9_epitope_Rep1 873.5171333744499 873.51602993586 79.852 2 -0.10748096891539727 0.027010411502231036 0.32882135672989754 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 104065 15529 SQDPTMIGV True PC9_epitope_Rep4 946.44298245802 946.44243496793 67.656 1 -0.10754146238929721 0.027010411502231036 0.32901820679788296 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 133715 19527 VYDPATETW True PC9_epitope_Rep1 1080.4763907612798 1080.47528993586 79.931 2 -0.10761399936445819 0.027010411502231036 0.3292542914856928 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 108481 21827 SYMFVDENTF True PC9_epitope_Rep1 1251.5117902938298 1251.51127496793 88.768 1 -0.10765127801803881 0.027010411502231036 0.32937564032082256 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 96561 18986 SAERPLLSI True PC9_epitope_Rep5 984.5603951687599 984.55928993586 78.055 2 -0.10765662743410923 0.027010411502231036 0.3293930546902035 ['ENST00000458258.5_1_9:114981336-114981609:-|nuORF'] 6776 6089 AQDGAHVVV True PC9_epitope_Rep1 894.4559301002199 894.45482993586 28.235 2 -0.1076602898482385 0.027010411502231036 0.3294049773819202 ['nc|ENSG00000285467|P0CG22|DHRS4L1', 'ENST00000558682.1_1_14:24505709-24507249:+|nuORF', 'nc|ENSG00000157326|Q9BTZ2-3|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-7|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-2|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-5|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-8|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-4|DHRS4', 'ENSG00000157326|ENST00000313250|DHRS4'] 103456 8750 SPPVPGPSA True PC9_epitope_Rep1 807.41266830591 807.41156993586 38.495 2 -0.10776465190055427 0.027029706897235554 0.32974477098506677 ['ENSG00000143756|ENST00000366862|FBXO28'] 139498 14857 YLSEEVQAV True PC9_epitope_Rep4 1036.5076908895599 1036.5065899358601 65.086 2 -0.10779500098207816 0.02704792877114359 0.3298436035284039 ['ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000496047.5_1_2:85872080-85873002:+|nuORF'] 29502 23965 FVFPGELLL True PC9_epitope_Rep2 1033.5848190114498 1033.5837299358602 97.672 2 -0.10781132425399712 0.02704792877114359 0.32989676413638624 ['ENSG00000105281|ENST00000542575|SLC1A5'] 56248 14955 LCRREEDFI True PC9_epitope_Rep4 1179.57064258263 1179.56899490379 65.464 3 -0.1078191087254113 0.02704792877114359 0.32992211696750195 ['ENST00000355072.9_1_4:3244305-3244500:+|nuORF'] 9882 23094 AYLIGSIGV True PC9_epitope_Rep5 891.50656869075 891.50546993586 93.817 2 -0.10784515056357453 0.027066685173801827 0.3300069352475024 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'ENST00000552300.1_1_12:78574665-78583766:+|nuORF'] 132901 12104 VVLVLAGR True PC9_epitope_Rep4 825.5436229058099 825.54252993586 54.362 2 -0.10786261980907089 0.027066685173801827 0.33006383604004214 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 137437 5923 YEDGGKPPVP True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 27.767 2 -0.10787378612379123 0.027085977157360407 0.33010020838968057 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 34747 16455 GQFDGLVEL True NCI_RA007_Epitope_Rep4 976.48656152216 976.48601496793 71.332 1 -0.10790447987128166 0.02709452361603869 0.33020019381982046 ['nc|ENSG00000074370|Q93084-4|ATP2A3', 'ENSG00000074370|ENST00000397041|ATP2A3', 'nc|ENSG00000074370|Q93084-3|ATP2A3', 'nc|ENSG00000074370|Q93084-7|ATP2A3', 'nc|ENSG00000074370|Q93084-1|ATP2A3', 'nc|ENSG00000074370|Q93084-6|ATP2A3', 'nc|ENSG00000074370|Q93084-5|ATP2A3'] 11373 5734 DERANLTTL True NCI_RA007_Epitope_Rep3 1031.5247379360299 1031.52364993586 29.533 2 -0.10793262428778354 0.02709452361603869 0.3302918822633942 ['ENSG00000015413|ENST00000690203|DPEP1', 'ENST00000565249.5_1_16:89680092-89703400:+|nuORF', 'ENST00000564281.5_1_16:89680092-89704100:+|nuORF'] 71752 4968 MEERAQLEA True H1975_Epitope_Rep1 1075.4968089360298 1075.49570993586 24.185 2 -0.10794278731266868 0.02709452361603869 0.3303249929713431 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2'] 120051 13450 VDSQILYY True H1975_Epitope_Rep2 999.49131254943 999.49020993586 56.869 2 -0.10794909172394543 0.02709452361603869 0.33034553294826535 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 67240 3581 LSRNQTVVV True NCI_RA007_Epitope_Rep4 1014.5821932424999 1014.58108993586 19.808 2 -0.10796418372226073 0.02709452361603869 0.33039470463071724 ['ENSG00000139946|ENST00000267460|PELI2'] 126543 13793 VLLNEDGKQL True PC9_epitope_Rep4 1127.6186383208699 1127.61754993586 60.95 2 -0.10802664060298092 0.02709452361603869 0.33059821912462817 ['ENSG00000164961|ENST00000318410|WASHC5'] 26491 21726 FIEVVGFII True PC9_epitope_Rep6 1035.6004690755897 1035.59936993586 96.456 2 -0.10805189721929018 0.02709452361603869 0.33068052730824943 ['ENSG00000147145|ENST00000614823|LPAR4'] 34895 16001 GQLSLYNIL True NCI_RA007_Epitope_Rep3 1019.56514619603 1019.56404993586 70.617 2 -0.10805282985996603 0.02709452361603869 0.3306835667788875 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'ENST00000401554.5_1_4:38112345-38138953:+|nuORF', 'ENST00000407365.5_1_4:38113700-38138953:+|nuORF'] 125018 18136 VICCSPSVF True PC9_epitope_Rep1 953.4350606266099 953.43396993586 74.552 2 -0.10806165277583005 0.02709452361603869 0.3307123209995724 ['ENSG00000168280|ENST00000435030|KIF5C', 'nc|ENSG00000168280|O60282-2|KIF5C'] 74555 13877 NFTNVAATF True NCI_RA007_Epitope_Rep5 983.4712458111899 983.47014993586 60.054 2 -0.10807636167285095 0.02709452361603869 0.33076025941917 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF'] 279 5789 AAGPPVEERFR True PC9_epitope_Rep3 1227.63601972051 1227.6343649037901 27.338 3 -0.10812863935640635 0.02709452361603869 0.33093065571969804 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 28898 14693 FTDGDAALEF True H1975_Epitope_Rep3 1084.4713053808398 1084.47020993586 61.888 2 -0.10813267900660788 0.02709452361603869 0.33094382376687714 ['ENSG00000173545|ENST00000308683|ZNF622'] 28137 18019 FRDAFTQEL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 74.512 2 -0.10823039817018706 0.02709452361603869 0.3312624036146793 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 1047 8368 AEAEPPSEVV True H1975_Epitope_Rep3 1026.48695544498 1026.48637496793 37.17 1 -0.10825339384406289 0.02709452361603869 0.3313373855931859 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 89515 21015 QYLDVLHAL True PC9_epitope_Rep5 1070.5760452329 1070.57494993586 85.891 2 -0.1082764026449045 0.02709452361603869 0.33141241512034914 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-3|TBC1D7'] 124816 11447 VHGPPVQL True PC9_epitope_Rep3 845.47593726881 845.47484993586 49.029 2 -0.1082915489662458 0.02709452361603869 0.3314618084334815 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 41913 19547 IDASNIVSL True PC9_epitope_Rep2 930.5022115863001 930.5016649679301 80.57 1 -0.1083016261678773 0.02709452361603869 0.3314946720975473 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 80071 20648 PFLDSQTGV True PC9_epitope_Rep5 962.47091145802 962.46980993586 84.476 2 -0.10831451817246869 0.02709452361603869 0.33153671669300055 ['nc|ENSG00000205683|Q92784-3|DPF3', 'nc|ENSG00000205683|Q92784-4|DPF3', 'nc|ENSG00000205683|Q92784-2|DPF3', 'nc|ENSG00000205683|Q92784-5|DPF3', 'ENSG00000205683|ENST00000556509|DPF3', 'ENSG00000133884|ENST00000528416|DPF2', 'ENST00000444314.6_1_11:65101357-65109054:+|nuORF', 'nc|ENSG00000133884|Q92785-2|DPF2', 'DPF2|p.K258Nfs*55|1|0.25|ENSG00000133884|chr11:65345800-65345800|A/-|frameshift_variant', 'ENSG00000011332|ENST00000355526|DPF1', 'nc|ENSG00000011332|Q92782-1|DPF1'] 56324 9155 LDCAHTAASF True PC9_epitope_Rep4 1034.44913046762 1034.4480299358602 42.808 2 -0.1083145790192674 0.02709452361603869 0.33153691513572453 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 130581 8880 VSRVVCAMI True PC9_epitope_Rep4 976.5197933100799 976.51868993586 41.689 2 -0.10832852406857234 0.02709452361603869 0.33158239570003034 ['nc|ENSG00000104055|O43548-2|TGM5', 'ENSG00000104055|ENST00000220420|TGM5'] 13947 10233 DRATLAAL True PC9_epitope_Rep6 829.4657665079299 829.46521496793 50.018 1 -0.1083494742235898 0.02709452361603869 0.3316507260764318 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 126684 24278 VLPDMFFSF True PC9_epitope_Rep1 1101.5205045027299 1101.51940993586 98.21 2 -0.10838749695252178 0.02710950814474258 0.3317747498519688 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 82432 11416 PPPLPPPPP True PC9_epitope_Rep4 907.51673945163 907.51564993586 51.682 2 -0.10844411977221133 0.02710950814474258 0.3319594679308683 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'ENSG00000135723|ENST00000258201|FHOD1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000090470|ENST00000204549|PDCD7', 'ENSG00000122574|ENST00000242140|WIPF3'] 141446 17566 YTFTRRFIYF True PC9_epitope_Rep6 1412.72410644892 1412.72245490379 80.208 3 -0.10845195115294225 0.02710950814474258 0.33198501814286124 ['ENST00000335670.10_1_15:60784332-60784527:-|nuORF'] 73504 21443 MVGEGFIEV True PC9_epitope_Rep1 979.4684689298699 979.46736993586 87.319 2 -0.10846021391688736 0.02710950814474258 0.3320119763534128 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 142781 20888 YYRPRFFLL True PC9_epitope_Rep5 1273.6971634250897 1273.69552490379 85.399 3 -0.10846225809081687 0.02710950814474258 0.3320186457980548 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 38496 3907 HEQQFAHPP True H1975_Epitope_Rep2 1089.4991918945298 1089.4980899358602 20.07 2 -0.10847792516105674 0.02710950814474258 0.33206976335821814 ['nc|ENSG00000130810|Q9NQ55-2|PPAN', 'ENSG00000130810|ENST00000253107|PPAN', 'nc|ENSG00000130810|Q9NQ55-3|PPAN'] 103587 12686 SPSPPSVAV True PC9_epitope_Rep5 839.4388830537499 839.43833496793 53.802 1 -0.10848111067888726 0.02710950814474258 0.33208015713869166 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 124729 12709 VHAPPMQL True PC9_epitope_Rep5 891.46365833295 891.46256993586 53.89 2 -0.10848316305065894 0.02710950814474258 0.33208685371212915 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 128650 7951 VPVHDIYVSQ True NCI_RA007_Epitope_Rep5 1155.59242357303 1155.5913299358601 37.273 2 -0.10852227879452991 0.02710950814474258 0.3322144895335994 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 131767 19188 VTPRQFFNV True PC9_epitope_Rep1 1106.58727862294 1106.5861899358601 78.601 2 -0.10858369357414117 0.02712394991282295 0.3324149152061564 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 83671 9600 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43308993586 41.902 2 -0.1085869803153258 0.02712394991282295 0.3324256423520274 ['ENSG00000168143|ENST00000306858|FAM83B'] 32991 8712 GIGAPVSRQVP True NCI_RA007_Epitope_Rep1 1079.6087423435101 1079.60764993586 37.89 2 -0.10860185673323046 0.02712394991282295 0.33247419666029593 ['nc|ENSG00000158062|Q5T124-4|UBXN11', 'ENSG00000158062|ENST00000374222|UBXN11', 'nc|ENSG00000158062|Q5T124-6|UBXN11', 'ENST00000472155.5_1_1:26611834-26629395:-|nuORF'] 64790 20402 LQAPPLTSL True PC9_epitope_Rep5 938.5436824754601 938.5431349679301 83.514 1 -0.10861314487363449 0.02712394991282295 0.332511040700184 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 69837 9211 LVGTNDADL True NCI_RA007_Epitope_Rep3 916.4501760134399 916.44906993586 43.327 2 -0.10863211845123333 0.02712394991282295 0.33257297224561677 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13136054-13190160:-|nuORF'] 134409 21559 VYPGLAVFF True PC9_epitope_Rep6 1011.5429541994698 1011.54184993586 95.802 2 -0.10865024594115415 0.02712394991282295 0.3326321450608822 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 99341 5957 SHSSSPTVL True PC9_epitope_Rep1 913.45051036661 913.44940993586 27.728 2 -0.10865215821337657 0.02712394991282295 0.3326383873816865 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 138563 14768 YIDDVFHAL True NCI_RA007_Epitope_Rep4 1091.52876068731 1091.52766993586 64.264 2 -0.10870436214349383 0.02712394991282295 0.33280881164577586 ['nc|ENSG00000143622|Q92963-2|RIT1', 'ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1'] 107727 18226 SVSFQDVTV True PC9_epitope_Rep1 980.4814761417199 980.48036993586 74.898 2 -0.1087213973197326 0.02712394991282295 0.33286442967402274 ['ZNF782|p.F353Lfs*9|1|0.24|ENSG00000196597|chr9:96818964-96818964|G/-|frameshift_variant', 'ENSG00000196597|ENST00000481138|ZNF782', 'ZNF658|p.H340Ifs*2|1|0.45|ENSG00000274349|chr9:66918582-66918582|C/-|frameshift_variant', 'nc|ENSG00000274349|Q5TYW1-2|ZNF658', 'ZNF658|p.A871Hfs*181|1|0.18|ENSG00000274349|chr9:66920175-66920175|G/-|frameshift_variant', 'ENSG00000274349|ENST00000621410|ZNF658', 'ENST00000377618.4_9:39444499-39464431:-|nuORF'] 53067 4982 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 24.023 2 -0.10873242694783575 0.02712394991282295 0.3329004415976564 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 30157 14745 FYPPKVELF True NCI_RA007_Epitope_Rep5 1138.60628273202 1138.6051899358602 63.39 2 -0.1088718494708015 0.027142687324166897 0.3333557510269255 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 62508 21742 LLIPGLATA True PC9_epitope_Rep5 867.54295419947 867.5424049679301 88.662 1 -0.10887525346528706 0.027142687324166897 0.3333668695265255 ['ENSG00000125356|ENST00000371437|NDUFA1'] 38642 19229 HFLDRHLVF True PC9_epitope_Rep3 1182.62981214126 1182.6281549037901 79.184 3 -0.10893925917937013 0.027161961367013373 0.33357595095705644 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 99070 11061 SHGNPILL True PC9_epitope_Rep4 849.47085188837 849.46974993586 50.323 2 -0.10895874055503656 0.027180696158646513 0.33363959606942795 ['nc|ENSG00000135318|P21589-2|NT5E', 'ENSG00000135318|ENST00000257770|NT5E'] 72615 11416 MLVTWQVP True H1975_Epitope_Rep1 972.5102741722 972.50916993586 48.892 2 -0.10896826986474667 0.027180696158646513 0.33367072927149993 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 27736 12566 FPRPVTVEP True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 56.159 2 -0.10904592422287115 0.027197274329972466 0.33392446343453447 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 56745 9982 LDLLPPSELHA True H1975_Epitope_Rep1 1203.64993844915 1203.6488499358602 43.33 2 -0.10905877509422139 0.027197274329972466 0.33396645850561 ['ENST00000360085.6_1_17:42043665-42081769:-|nuORF'] 67866 22719 LTAPPEALLMV True PC9_epitope_Rep1 1153.6416822645701 1153.6405899358601 92.193 2 -0.10906748623021958 0.027197274329972466 0.33399492625041916 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 39206 12379 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45940496793 55.424 1 -0.1091151877192335 0.027197274329972466 0.3341508251142127 ['ENSG00000132646|ENST00000379143|PCNA'] 48223 21106 IYPWVHVVI True PC9_epitope_Rep2 1124.6382515666398 1124.6371499358602 86.643 2 -0.10911658782823398 0.027197274329972466 0.33415540127570714 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 12519 9042 DKKEHLVL True PC9_epitope_Rep4 980.5654805491998 980.56438993586 42.353 2 -0.10917312660125661 0.027197274329972466 0.3343402087113743 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3'] 107055 9871 SVGGGLGGLLL True NCI_RA007_Epitope_Rep5 941.55458151233 941.55348993586 44.615 2 -0.10922613332139536 0.02725616036764123 0.334513496267147 ['nc|ENSG00000132677|Q9H310-3|RHBG', 'nc|ENSG00000132677|Q9H310-4|RHBG', 'nc|ENSG00000132677|Q9H310-2|RHBG', 'ENSG00000132677|ENST00000537040|RHBG'] 6467 9569 APSGNYVAC True PC9_epitope_Rep1 880.3749028981999 880.37380993586 41.665 2 -0.10925188042066412 0.027293614324195848 0.3345976765237764 ['ENSG00000114450|ENST00000232564|GNB4'] 101077 5640 SLGGEVTR True NCI_RA007_Epitope_Rep1 817.42938099921 817.42828993586 25.999 2 -0.10929596680658923 0.027293614324195848 0.3347418305312149 ['ENST00000375050.5_1_6:32157573-32157942:-|nuORF'] 86771 22451 QLLNWVYLSL True PC9_epitope_Rep5 1247.69140933831 1247.6903099358601 91.358 2 -0.10930609417175036 0.027293614324195848 0.334774947450983 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 77268 10091 NSATGVPTV True PC9_epitope_Rep4 844.42904664604 844.4284949679301 46.487 1 -0.10933235194653655 0.027293614324195848 0.33486081564626835 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 37794 14058 GYEPPVQESV True PC9_epitope_Rep2 1103.51350454599 1103.5124099358602 59.352 2 -0.10933691764415615 0.027309093789607098 0.3348757470039994 ['ENSG00000145425|ENST00000274065|RPS3A'] 14195 9486 DSDYHDENMYY True H1975_Epitope_Rep1 1450.49832505766 1450.49722993586 41.407 2 -0.10938009547412188 0.027309093789607098 0.3350169618706183 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 121232 10572 VETDFSTPTP True H1975_Epitope_Rep2 1092.49752012868 1092.4969749679299 45.688 1 -0.10939054093127461 0.027309093789607098 0.3350511265911885 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 3909 10304 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47787496793 44.519 1 -0.10940128518937085 0.027309093789607098 0.33508626960637905 ['ENSG00000075618|ENST00000382361|FSCN1'] 12616 13155 DLAGSIIGK True PC9_epitope_Rep6 872.4967322830399 872.49562993586 62.242 2 -0.10941265228696667 0.027309093789607098 0.33512345093185764 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 57799 7163 LEERTPPVP True H1975_Epitope_Rep1 1036.5553097883198 1036.5542099358602 32.576 2 -0.10944566978473041 0.027309093789607098 0.33523145618899214 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 103460 8721 SPPVPGPSA True PC9_epitope_Rep3 807.41266830591 807.41156993586 38.498 2 -0.10944640244664387 0.027309093789607098 0.3352338529443262 ['ENSG00000143756|ENST00000366862|FBXO28'] 76 8776 AAAIEVHEV True PC9_epitope_Rep2 937.48689587533 937.48578993586 39.112 2 -0.10945309384631793 0.027309093789607098 0.33525574272004016 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 96147 5008 RYPDNLKHL True PC9_epitope_Rep6 1154.61964138038 1154.61799490379 26.883 3 -0.1094756506115042 0.027327814962968832 0.33532953618678024 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 85806 13427 QHDPYITSI True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 56.508 2 -0.10948222223609555 0.027327814962968832 0.3353510357936797 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 108916 9347 TADGAHFEL True NCI_RA007_Epitope_Rep4 959.43486030247 959.43376993586 42.808 2 -0.10953508550691121 0.027347076179726332 0.33552399584398257 ['ENSG00000085872|ENST00000546361|CHERP', 'ENST00000546538.1_1_19:16643407-16652813:-|nuORF'] 84281 19390 PYPPPPPEF True PC9_epitope_Rep1 1039.5014833103098 1039.50038993586 79.395 2 -0.10957436410777276 0.027366336633663366 0.3356525246367362 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 118130 17612 TYIKFINLF True NCI_RA007_Epitope_Rep5 1157.6484818971699 1157.64738993586 74.527 2 -0.10959643786669766 0.02738505405726506 0.33572476097477044 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50303271-50309027:+|nuORF'] 45262 3990 IPVEQKEGA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 20.426 2 -0.10959931995643189 0.02738505405726506 0.3357341929174766 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 64262 8055 LPHGFTNM[Oxidation]A True PC9_epitope_Rep4 1002.4593016089401 1002.4582099358599 38.435 2 -0.10967452903933936 0.027423027423027425 0.33598034778152874 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 1355 6469 AEEAARLSVAA True H1975_Epitope_Rep3 1086.56693710118 1086.5658499358601 29.855 2 -0.1096835651523276 0.027423027423027425 0.3360099257069238 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 114854 15472 TQNPNYYNL True PC9_epitope_Rep2 1125.5090878718902 1125.50798993586 64.79 2 -0.1097602169472869 0.027423027423027425 0.336260858281677 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 115838 19062 TSDTQWGWFY True H1975_Epitope_Rep2 1289.53530261973 1289.5342099358602 79.133 2 -0.10985059495831923 0.027461539984556596 0.3365567904260134 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11'] 108608 8723 SYPDNHQEF True PC9_epitope_Rep5 1135.45705229903 1135.4559499358602 38.495 2 -0.10989849246681727 0.027461539984556596 0.33671365339729026 ['ENSG00000169967|ENST00000682094|MAP3K2'] 138028 5908 YFYKYFRDERR True NCI_RA007_Epitope_Rep1 1641.8052103039297 1641.80356490379 27.032 3 -0.10995501221369679 0.02748025104436833 0.33689877904803284 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 48363 12659 IYTFPHSAF True NCI_RA007_Epitope_Rep5 1081.5232813840498 1081.52218993586 55.348 2 -0.10996322077929693 0.02748025104436833 0.336925667766829 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 97913 4071 SEMRAPPAA True NCI_RA007_Epitope_Rep5 928.4436511643598 928.44254993586 22.106 2 -0.10997439975397565 0.027499505048505245 0.33696228754546925 ['ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF'] 39450 13819 HLAIKLEQV True PC9_epitope_Rep3 1049.62332977849 1049.62222993586 58.235 2 -0.11007171507792513 0.02752711153328584 0.3372811151531943 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 56871 9863 LDPNADLAY True H1975_Epitope_Rep1 990.46582607758 990.46472993586 42.872 2 -0.11007901748155043 0.02752711153328584 0.3373050427566823 ['ENSG00000167306|ENST00000285039|MYO5B', 'MYO5B|p.L1524Tfs*10|1|0.05|ENSG00000167306|chr18:49843282-49843283|-/T|frameshift_variant', 'nc|ENSG00000167306|Q9ULV0-2|MYO5B'] 29854 13863 FVTEGSHFVEA True PC9_epitope_Rep3 1221.56660274801 1221.56550993586 58.405 2 -0.11009060368141536 0.02752711153328584 0.3373430078931203 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 71122 24246 LYLPFSLTF True PC9_epitope_Rep5 1099.59538369515 1099.5942899358602 98.271 2 -0.11014541490127444 0.02752711153328584 0.3375226261896398 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 76322 10758 NPSSVIHVV True PC9_epitope_Rep4 950.51853035678 950.51742993586 49.138 2 -0.11015759464594661 0.02752711153328584 0.33756254308367306 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP', 'HINFP|p.Q469L|1|0.54|ENSG00000172273|chr11:119134350-119134350|A/T|missense_variant'] 142939 6610 YYYRRRHRHER True NCI_RA007_Epitope_Rep5 1690.8665222042198 1690.8648749037902 32.085 3 -0.11024349920913558 0.02752711153328584 0.3378441151202618 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 138668 22100 YIITEIPSL True PC9_epitope_Rep2 1047.58521293427 1047.5841099358602 90.479 2 -0.110248068887473 0.02752711153328584 0.33785909503486733 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 121954 17804 VFTEVANLF True NCI_RA007_Epitope_Rep4 1038.53859709502 1038.53750993586 77.088 2 -0.11024923624998086 0.02752711153328584 0.33786292180733934 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 87180 14996 QPHIAGVFSA True PC9_epitope_Rep1 1025.52942939365 1025.52832993586 62.501 2 -0.11024999294674134 0.02752711153328584 0.33786540236796536 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 117033 7161 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 34.83 2 -0.11025931918708663 0.02752711153328584 0.3378959755178832 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 67158 9689 LSQTEDRQLR True PC9_epitope_Rep1 1244.6473126801998 1244.64565490379 42.124 3 -0.11026507377470499 0.02752711153328584 0.33791484049056064 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'ENST00000485409.5_1_3:196921289-197023334:-|nuORF', 'ENST00000486877.1_1_3:197009543-197024075:-|nuORF'] 107140 20880 SVIDIINGEA True PC9_epitope_Rep2 1029.5342399905699 1029.5331499358601 85.759 2 -0.11027744624289741 0.02752711153328584 0.3379554014670746 ['ENSG00000168090|ENST00000303904|COPS6'] 765 17157 AAVPSVCFL True H1975_Epitope_Rep2 905.46807500705 905.4675249679301 71.275 1 -0.1103995087023099 0.02752711153328584 0.3383556307107195 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 80564 10558 PGPQTVLI True NCI_RA007_Epitope_Rep1 823.4803539429099 823.47924993586 45.052 2 -0.11040245625993475 0.02752711153328584 0.3383652969667906 ['ENSG00000027001|ENST00000382172|MIPEP', 'ENST00000382172.3_1_13:24460505-24460568:-|nuORF', 'ENST00000424756.1_1_13:21875607-21878632:+|nuORF'] 48371 12708 IYTHQSDVW True PC9_epitope_Rep5 1147.5298233164701 1147.5287299358602 53.886 2 -0.11040793512876987 0.02752711153328584 0.33838326462833146 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000146648|ENST00000275493|EGFR'] 70963 20053 LYGQVQVF True PC9_epitope_Rep2 952.5018176634799 952.50072993586 82.54 2 -0.11042044096879762 0.02752711153328584 0.33842427781109974 ['ENSG00000162408|ENST00000377705|NOL9'] 49106 5768 KEIHVNIEA True H1975_Epitope_Rep1 1051.56620882519 1051.5651099358602 27.258 2 -0.11044179493956306 0.02752711153328584 0.33849431165622285 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 70798 11012 LYAPYSTHF True NCI_RA007_Epitope_Rep5 1097.51819600361 1097.5170899358602 48.992 2 -0.11044585815751744 0.02752711153328584 0.3385076380761582 ['ENSG00000013588|ENST00000014914|GPRC5A'] 37951 13707 HACGVIATI True PC9_epitope_Rep5 883.4585729525099 883.45746993586 57.751 2 -0.11044901678302875 0.02752711153328584 0.33851799773620717 ['ENSG00000183726|ENST00000374358|TMEM50A', 'ENST00000480937.5_1_1:25666968-25687193:+|nuORF'] 106048 10688 STAAKIMGV True PC9_epitope_Rep5 876.4738886634799 876.47278993586 46.102 2 -0.11047588702913312 0.02752711153328584 0.33860613013554314 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 119160 7409 VAIRRKDSPP True H1975_Epitope_Rep2 1137.66184054553 1137.6607499358602 33.441 2 -0.11048017680648926 0.02752711153328584 0.33862020084199906 ['ENST00000421951.5_1_2:89072537-89077837:+|nuORF'] 20208 5348 ENKGTALLTVY True NCI_RA007_Epitope_Rep4 1207.64485306871 1207.64320490379 27.137 3 -0.11048325613259741 0.02752711153328584 0.3386303012961306 ['NALCN|p.D1171Y|1|0.08|ENSG00000102452|chr13:101083783-101083783|C/A|missense_variant'] 4135 6423 AHSSDPVEM True PC9_epitope_Rep5 971.40184592203 971.40074993586 29.682 2 -0.11053111204008613 0.027545810741283098 0.3387872829349749 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF'] 133668 18862 VYAPPVGGF True PC9_epitope_Rep4 905.4647038787698 905.4641549679301 80.64 1 -0.11057399769821935 0.027545810741283098 0.3389279768638482 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 113439 11321 TLSNPQMSLE True NCI_RA007_Epitope_Rep2 1118.5277747111402 1118.5266699358601 48.626 2 -0.11062074582904174 0.027565053923023646 0.33908135971589337 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000498017.1_1_1:201979803-201980477:+|nuORF', 'ENST00000495848.1_1_1:201979803-201981353:+|nuORF', 'ELF3|p.F303Lfs*22|1|0.37|ENSG00000163435|chr1:202013932-202013932|C/-|frameshift_variant'] 8271 2614 ATIDGSVNPK True NCI_RA007_Epitope_Rep5 1000.5189242796 1000.51782993586 14.747 2 -0.11063381024858567 0.027580476030310823 0.33912422794255603 ['ENSG00000116830|ENST00000369466|TTF2', 'ENST00000463696.1_1_1:117637951-117640053:+|nuORF', 'ENST00000492682.5_1_1:117635418-117640830:+|nuORF'] 64365 20378 LPLLPAPGAAA True PC9_epitope_Rep2 989.5909670210498 989.58986993586 83.807 2 -0.11064567531026247 0.027580476030310823 0.3391631619471321 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 110959 5343 THAGAHLDL True PC9_epitope_Rep4 933.4668291370899 933.4657299358599 27.269 2 -0.11073755888171222 0.027580476030310823 0.3394647080874927 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 130244 17459 VSFNIFITL True PC9_epitope_Rep1 1052.59063266788 1052.5895299358601 71.953 2 -0.11076660893442183 0.027580476030310823 0.33956005990205285 ['OR5B3|p.A208T|1|0.27|ENSG00000172769|chr11:58402788-58402788|C/T|missense_variant'] 77892 21549 NVIDNLIVA True PC9_epitope_Rep5 969.5494961318899 969.5489449679301 87.926 1 -0.11080348123761342 0.027580476030310823 0.3396810969382227 ['ENSG00000143621|ENST00000361891|ILF2'] 68134 4705 LTDPRGAQAHY True H1975_Epitope_Rep3 1227.5996342117899 1227.5979749037901 23.223 3 -0.11084350425090897 0.027580476030310823 0.33981248917507795 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 69486 18146 LVAPPLPAA True PC9_epitope_Rep4 847.51673945163 847.51564993586 77.864 2 -0.11084451629803095 0.027580476030310823 0.33981581181286147 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 93252 17474 RPRRPRRWWRQ True NCI_RA007_Epitope_Rep5 1648.9399619279998 1648.93886993586 74.0 2 -0.11087664937384377 0.027580476030310823 0.33992131184539537 ['ENST00000372022.5_1_9:136199397-136199478:-|nuORF'] 57798 7070 LEERTPPVP True H1975_Epitope_Rep1 1036.5553097883198 1036.5542099358602 32.221 2 -0.1109066913395574 0.027598623036442053 0.340019953973774 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 31797 6313 GEIEYEVQR True NCI_RA007_Epitope_Rep4 1121.53530261973 1121.5342099358602 30.888 2 -0.11093394306493803 0.027598623036442053 0.3401094408187891 ['ENSG00000173546|ENST00000308508|CSPG4'] 121239 13813 VETDQRKM True H1975_Epitope_Rep3 1005.4913296327699 1005.49022993586 58.438 2 -0.11093938685889117 0.027598623036442053 0.34012731740582447 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 47709 21531 IYAPPLPSL True PC9_epitope_Rep2 969.55351888317 969.55242993586 88.286 2 -0.1109684657186004 0.027617860604981503 0.3402228120497137 ['ENSG00000121057|ENST00000337714|AKAP1'] 138708 17532 YIPGRQIIEV True PC9_epitope_Rep1 1186.6710082468999 1186.66990993586 72.23 2 -0.11102445795364745 0.027655786350148367 0.3404067094132261 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 38377 5844 HEKQVYDIAA True H1975_Epitope_Rep3 1172.5825871653199 1172.58094490379 27.493 3 -0.11103063267093355 0.027655786350148367 0.3404269908349076 ['ENSG00000018510|ENST00000264167|AGPS'] 60924 9850 LIANNNAP True PC9_epitope_Rep1 825.43446637965 825.43336993586 42.748 2 -0.11105678059869098 0.027655786350148367 0.3405128795394987 ['nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 38458 8895 HEPEPHIL True PC9_epitope_Rep3 970.4872302285 970.48612993586 39.166 2 -0.11109579277886693 0.027673926374300238 0.3406410341283895 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 77982 16872 NVPDSFNEV True PC9_epitope_Rep3 1019.45598966987 1019.45488993586 70.055 2 -0.11110154176496652 0.027673926374300238 0.3406599205348716 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 126578 15501 VLLTGLHAV True PC9_epitope_Rep4 921.5647522732099 921.56364993586 67.55 2 -0.11110890898814775 0.027673926374300238 0.3406841235218704 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 8391 18826 ATLPTTLGV True PC9_epitope_Rep4 871.5014833103099 871.5009349679301 80.501 1 -0.11117094038577384 0.027692612006725348 0.3408879281601728 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 57712 9279 LEELEAAR True PC9_epitope_Rep1 929.4818104948899 929.48070993586 40.546 2 -0.11118274553084907 0.027692612006725348 0.34092671760185345 ['ENSG00000108479|ENST00000588479|GALK1', 'GALK1|p.D268N|1|0.45|ENSG00000108479|chr17:75758591-75758591|C/T|missense_variant'] 5830 8216 APFAAHGYGA True PC9_epitope_Rep4 960.4453654165198 960.44426993586 39.061 2 -0.11128149673129067 0.027731624337368463 0.341251239419678 ['ENSG00000126067|ENST00000373237|PSMB2'] 70502 15744 LVVSTQTALA True PC9_epitope_Rep2 1001.5757108797299 1001.5746099358599 65.829 2 -0.11131165102839743 0.027750855470063493 0.34135034994057006 ['CON__P02769'] 77220 8600 NRVAVQGDVV True PC9_epitope_Rep1 1055.5723568347898 1055.5712499358601 37.915 2 -0.11140111645673482 0.027827772393742213 0.341644446317729 ['ENSG00000136628|ENST00000366923|EPRS1'] 47983 16712 IYKFITERF True PC9_epitope_Rep2 1215.6651945904698 1215.66355490379 69.53 3 -0.1114018984505054 0.027827772393742213 0.34164701722161067 ['ENSG00000178919|ENST00000375123|FOXE1'] 716 17006 AAVEWFDGK True PC9_epitope_Rep6 1021.4868958753298 1021.48578993586 77.965 2 -0.11141817238570809 0.027827772393742213 0.3417005209701511 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 73762 7014 NAEYSEKRFRM True PC9_epitope_Rep4 1429.67723290949 1429.6761299358602 34.226 2 -0.11143674729616575 0.027827772393742213 0.34176159223335617 ['MRAP2|p.S80Y|1|0.29|ENSG00000135324|chr6:84089102-84089102|C/A|missense_variant'] 87438 14099 QPYMPTVSA True PC9_epitope_Rep6 992.4637179025999 992.46262993586 66.104 2 -0.11150024509540399 0.027884900622960545 0.34197038356803733 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 37074 21560 GVPQALFGV True PC9_epitope_Rep1 886.4912529797799 886.49070496793 87.752 1 -0.1115198606947394 0.027884900622960545 0.34203488947645644 ['ENSG00000010292|ENST00000315579|NCAPD2'] 85993 11588 QHLLDTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 55.687 2 -0.1115255248697384 0.027884900622960545 0.34205351669368295 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 68857 6986 LTMPGGVAK True NCI_RA007_Epitope_Rep4 872.47897404392 872.47786993586 33.497 2 -0.11153482970847307 0.027884900622960545 0.34208411716388903 ['nc|ENSG00000087266|P78314-2|SH3BP2', 'ENST00000511663.5_1_4:2811506-2826487:+|nuORF', 'ENST00000511237.5_1_4:2795936-2826487:+|nuORF', 'ENST00000511185.5_1_4:2814082-2826487:+|nuORF', 'ENSG00000087266|ENST00000503393|SH3BP2', 'nc|ENSG00000087266|P78314-3|SH3BP2', 'nc|ENSG00000087266|P78314-4|SH3BP2'] 77210 5505 NRSSVEVRM True PC9_epitope_Rep5 1076.53967680752 1076.53856993586 26.183 2 -0.11157324813856533 0.027903021673785795 0.3422104697503897 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 17564 9810 EHGPNPIL True PC9_epitope_Rep1 875.45011644379 875.44900993586 42.596 2 -0.1115942642366994 0.027903021673785795 0.3422795936222797 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 15989 19095 EDRLGSVLL True PC9_epitope_Rep5 1000.5553097883198 1000.55420993586 78.479 2 -0.11160456966344735 0.027903021673785795 0.34231349040710085 ['ENSG00000132205|ENST00000254528|EMILIN2'] 33189 9838 GIYAYGFEK True NCI_RA007_Epitope_Rep4 1046.50729696674 1046.5061899358602 44.689 2 -0.11165407510020821 0.02794091475351486 0.3424763363734182 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000465222.1_1_3:186502277-186502505:+|nuORF', 'ENST00000485101.5_1_3:186501384-186502505:+|nuORF', 'ENST00000486805.5_1_3:186501384-186502505:+|nuORF', 'ENST00000584054.5_1_17:7476159-7478064:+|nuORF', 'ENST00000467585.1_1_3:186502182-186503751:+|nuORF', 'ENST00000575957.1_1_17:78115565-78120760:-|nuORF', 'ENST00000582848.5_1_17:7476159-7480015:+|nuORF', 'ENST00000584901.5_1_17:7476159-7480015:+|nuORF', 'nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 72984 18162 MQMSPALTC True PC9_epitope_Rep1 980.4129452830399 980.41239496793 74.651 1 -0.11166980286937803 0.02794091475351486 0.34252807628087867 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 19532 7354 ELPRSAQTQGS True NCI_RA007_Epitope_Rep2 1172.5785644140399 1172.57746993586 33.228 2 -0.11169130709726459 0.02794091475351486 0.34259882229772465 ['ENST00000396008.2_1_22:46447675-46449969:-|nuORF'] 75675 12542 NLGSVVLQLK True NCI_RA007_Epitope_Rep1 1069.6495445263297 1069.64844993586 52.765 2 -0.11178605176878154 0.027960136043660523 0.3429105634110886 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant', 'ENST00000503562.1_1_4:24541566-24543501:-|nuORF'] 71797 2743 MEGPPRPQA True H1975_Epitope_Rep2 981.47020026537 981.46910993586 14.593 2 -0.11187569875739142 0.02797548438117833 0.34320559717505095 ['ENST00000380502.7_2_9:19102712-19102766:-|nuORF'] 134400 21030 VYPGLAVFF True NCI_RA007_Epitope_Rep2 1011.5429541994698 1011.5423749679301 86.994 1 -0.11194549753953499 0.02797548438117833 0.3434353533637421 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 109801 13385 TEEDPSLPAL True H1975_Epitope_Rep2 1070.5131701928199 1070.5120699358602 56.619 2 -0.11194569735893634 0.02797548438117833 0.34343601116324984 ['ENSG00000068654|ENST00000263857|POLR1A'] 24629 17470 FAITAIKGV True PC9_epitope_Rep2 918.5538532363399 918.55274993586 72.45 2 -0.11194820208394655 0.02797548438117833 0.3434442566700205 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18', 'ENST00000495909.2_1_5:90650295-90650631:+|nuORF'] 104343 18339 SQISDTSVVL True PC9_epitope_Rep1 1047.5448046742702 1047.54427496793 75.329 1 -0.11197149563792808 0.02797548438117833 0.3435209409769916 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 678 19329 AATSVTFVGV True PC9_epitope_Rep2 950.5072969667399 950.50618993586 79.723 2 -0.11204191058187092 0.02797548438117833 0.34375277882686767 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF'] 88979 13317 QVIKDITQV True PC9_epitope_Rep5 1042.60225998074 1042.60116993586 56.236 2 -0.11204229549069639 0.02797548438117833 0.34375404622821615 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 117058 13309 TVIENIHTI True PC9_epitope_Rep4 1038.57095985246 1038.5698699358602 59.087 2 -0.11204555605408466 0.02797548438117833 0.3437647824342229 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant', 'USP24|p.V1215*|1|0.31|ENSG00000162402|chr1:55125751-55125751|C/-|frameshift_variant', 'USP24|p.A1582Qfs*15|1|0.1|ENSG00000162402|chr1:55107257-55107257|C/-|frameshift_variant'] 113708 20350 TLYQSNTIL True PC9_epitope_Rep3 1051.55497543515 1051.5538699358601 83.524 2 -0.11208076744994346 0.027993594685961687 0.3438807299354503 ['ENSG00000084207|ENST00000398606|GSTP1', 'GSTP1|p.K189Pfs*13|1|0.3|ENSG00000084207|chr11:67586505-67586506|-/CC|frameshift_variant', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'ENST00000494593.1_1_11:67352122-67352251:+|nuORF'] 276 5704 AAGPPVEERFR True PC9_epitope_Rep1 1227.63601972051 1227.6343649037901 26.762 3 -0.11209195177186405 0.027993594685961687 0.3439175607962815 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 68133 4833 LTDPRGAQAHY True H1975_Epitope_Rep2 1227.5996342117899 1227.5979749037901 23.68 3 -0.112103569434267 0.027993594685961687 0.3439558197225738 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 14996 15494 DYKESFNTI True PC9_epitope_Rep1 1115.5135045459901 1115.51297496793 64.42 1 -0.11213302426834543 0.02801059539811813 0.34405282422073724 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1'] 77983 15704 NVPDSFNEV True PC9_epitope_Rep4 1019.45598966987 1019.45488993586 68.332 2 -0.11213747706297965 0.02801059539811813 0.3440674893368029 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 71648 6606 MDYHRRQREER True PC9_epitope_Rep2 1574.74844078714 1574.7467849037898 30.822 3 -0.1122335230880588 0.02801059539811813 0.344383851218979 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 97979 7181 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.41776993586 32.596 2 -0.11226396510008729 0.02801059539811813 0.34448413791695326 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 73735 13149 NAAPGVDL True PC9_epitope_Rep3 755.38136817763 755.38026993586 55.608 2 -0.11229309477299203 0.02801059539811813 0.34458010808188444 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 29565 12864 FVIEIQKN True H1975_Epitope_Rep3 989.5545815123298 989.55348993586 54.704 2 -0.11231835944304354 0.028047912713472487 0.34466335002745024 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-3|CDCP1'] 136954 11304 YAGSGNVL True PC9_epitope_Rep3 779.38136817763 779.38026993586 48.486 2 -0.11232284337799077 0.028047912713472487 0.34467812420020033 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 96913 5480 SAVLQDSSP True NCI_RA007_Epitope_Rep2 902.4345259493 902.43342993586 25.933 2 -0.11235762189459177 0.028047912713472487 0.3447927216810242 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'nc|ENSG00000179532|Q96M86-4|DNHD1'] 73763 7099 NAEYSEKRFRM True PC9_epitope_Rep4 1429.67723290949 1429.6761299358602 34.573 2 -0.11235838376878064 0.028047912713472487 0.3447952322115363 ['MRAP2|p.S80Y|1|0.29|ENSG00000135324|chr6:84089102-84089102|C/A|missense_variant'] 101732 15146 SLNIITVTL True PC9_epitope_Rep4 972.58554728744 972.58444993586 66.186 2 -0.11239760375533103 0.028066569158398228 0.34492447614529886 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132676-7132733:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 5782 5260 APDEKYVAA True PC9_epitope_Rep4 962.4709114580199 962.46980993586 26.933 2 -0.11240423918604317 0.028066569158398228 0.34494634345342595 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 132763 19566 VVINYTEQL True PC9_epitope_Rep5 1077.57062549929 1077.57007496793 80.31 1 -0.11242962883145981 0.028085779227196364 0.34503001912815273 ['ENSG00000095015|ENST00000399503|MAP3K1'] 54627 9560 KYLEERAMRQF True PC9_epitope_Rep4 1469.74491854649 1469.74327490379 44.39 3 -0.11262231822427134 0.0281044330691543 0.34566522076602063 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 32891 13618 GHSSVFQAL True PC9_epitope_Rep2 944.47158016436 944.47048993586 57.674 2 -0.11263051398191919 0.0281044330691543 0.34569224447971303 ['ENST00000581005.1_1_17:71069947-71084903:-|nuORF', 'ENST00000582179.5_1_17:70943804-71084903:-|nuORF', 'SLC39A11|p.M271Nfs*18|1|0.5|ENSG00000133195|chr17:72648941-72648942|-/T|frameshift_variant', 'ENSG00000133195|ENST00000255559|SLC39A11', 'nc|ENSG00000133195|Q8N1S5|SLC39A11'] 52844 12411 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54346496793 52.769 1 -0.11275994190507674 0.028122529644268774 0.34611907312359563 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 46279 13182 ISPMAPIAT True PC9_epitope_Rep1 899.47863969075 899.47754993586 55.568 2 -0.11276455371416869 0.028122529644268774 0.3461342843628272 ['ENST00000592091.5_3_19:5897005-5903757:-|nuORF', 'ENST00000593233.1_1_19:5901390-5903757:-|nuORF', 'ENST00000591160.1_1_19:5902449-5903757:-|nuORF'] 79444 6243 PAVFPAAR True NCI_RA007_Epitope_Rep3 827.4653725851099 827.46426993586 31.563 2 -0.11287486145090385 0.028122529644268774 0.346498163453566 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 137676 17069 YEIYSDFAL True PC9_epitope_Rep6 1119.5124419168299 1119.5113499358602 78.22 2 -0.11295773255218756 0.02817624975301324 0.3467715966357754 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'nc|ENSG00000196655|Q9Y296-2|TRAPPC4'] 7631 16626 ASGSEVVLL True PC9_epitope_Rep3 873.4807478657299 873.47964993586 69.088 2 -0.11299728139276773 0.02817624975301324 0.3469021064350639 ['nc|ENSG00000256590|A0JD37|TRDV3'] 38867 3896 HHDSHSSVIL True PC9_epitope_Rep4 1130.5468703629401 1130.54521490379 21.168 3 -0.11300279801268912 0.02817624975301324 0.3469203120326852 ['ENSG00000129315|ENST00000261900|CCNT1'] 112351 21851 TLAGALLALYL True PC9_epitope_Rep5 1117.6746966450098 1117.67358993586 89.085 2 -0.11303751461595002 0.02817624975301324 0.34703488685111544 ['ENSG00000259803|ENST00000682282|SLC22A31', 'nc|ENSG00000259803|A6NKX4|SLC22A31'] 12430 8893 DIVMTQSPD True NCI_RA007_Epitope_Rep3 1004.44846176128 1004.44736993586 42.067 2 -0.11304442631731056 0.02817624975301324 0.34705769855226865 ['nc|ENSG00000211598|P06312|IGKV4-1'] 134238 14345 VYMGCDLPP True PC9_epitope_Rep4 993.4299752461699 993.42886993586 63.082 2 -0.11305968316836561 0.02817624975301324 0.34710805425489477 ['nc|ENSG00000073146|Q9BXT6-2|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-4|MOV10L1', 'ENSG00000073146|ENST00000262794|MOV10L1'] 120186 9015 VEAPPVVTA True H1975_Epitope_Rep1 881.4858332461699 881.48528496793 39.581 1 -0.11305996108329157 0.02817624975301324 0.3471089715379339 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 75188 19636 NIANHFFTV True PC9_epitope_Rep5 1061.52942939365 1061.52887496793 80.585 1 -0.11307544397551046 0.02817624975301324 0.3471600751301079 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 108900 9007 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.5387149679301 39.641 1 -0.1130783133037801 0.02817624975301324 0.34716954597468996 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 33021 6872 GIHETTFNS True PC9_epitope_Rep1 1004.4563240230401 1004.45522993586 31.237 2 -0.11309939785005703 0.02817624975301324 0.3472391420338551 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000437653.1_1_3:175695464-175695797:-|nuORF', 'ENST00000418351.1_1_15:44281261-44281585:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 134372 7115 VYPERSTSY True PC9_epitope_Rep5 1100.51383889916 1100.51274993586 32.335 2 -0.11312084676356582 0.028194894491424958 0.34730994424685546 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 80931 13623 PIDGIDAVL True NCI_RA007_Epitope_Rep3 911.49639792987 911.4958449679301 60.887 1 -0.11312575263743148 0.028194894491424958 0.3473261388759456 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 74498 9295 NFGFGDSRG True PC9_epitope_Rep4 955.4147935642299 955.41368993586 43.36 2 -0.11314943436146019 0.028212422949265053 0.3474043164404472 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 17849 13119 EHVEAIKIGL True PC9_epitope_Rep4 1107.6288090817498 1107.6277099358601 58.356 2 -0.11320212804912905 0.028212422949265053 0.3475782828053602 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ZWINT|p.A199Qfs*76|1|0.22|ENSG00000122952|chr10:56358833-56358833|C/-|frameshift_variant', 'ENSG00000122952|ENST00000373944|ZWINT'] 18091 11923 EIHSIGSIIAV True H1975_Epitope_Rep3 1137.63937376545 1137.63826993586 51.014 2 -0.11321502608530068 0.028212422949265053 0.34762086840558465 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 126687 23312 VLPDMFFSF True PC9_epitope_Rep4 1101.5205045027299 1101.51940993586 97.924 2 -0.11322503332664052 0.028212422949265053 0.34765391029614623 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 45337 9891 IQDDAVHTL True PC9_epitope_Rep3 1010.50327421546 1010.50216993586 43.003 2 -0.11330287285502354 0.028229390964224332 0.34791094639011994 ['ENSG00000115816|ENST00000234170|CEBPZ'] 125471 17494 VIVPLYDTL True NCI_RA007_Epitope_Rep5 1031.5902983147098 1031.58920993586 74.081 2 -0.11333418932322889 0.028229390964224332 0.34801437020023646 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 5876 6557 APGGFVHSA True PC9_epitope_Rep1 841.40825163181 841.40714993586 30.026 2 -0.113339884420461 0.028229390964224332 0.3480331792616465 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 108385 15825 SYLERHGLINF True PC9_epitope_Rep6 1347.6935345966297 1347.69187490379 73.135 3 -0.11334239522958729 0.028229390964224332 0.34804147172800615 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 106771 17149 SVAAQLTGV True PC9_epitope_Rep4 844.4654321547599 844.46432993586 73.97 2 -0.11334329931731295 0.028229390964224332 0.3480444576762337 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 77279 16968 NSDLNNLLF True H1975_Epitope_Rep1 1048.5189242796 1048.5178299358602 70.69 2 -0.11339805373492118 0.02824802955178476 0.34822530755888675 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 138287 7976 YHDDDNSVL True PC9_epitope_Rep2 1076.44106788172 1076.43996993586 36.043 2 -0.11339996242576239 0.02824802955178476 0.3482316122308475 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 8873 21498 AVFPFQPGSV True PC9_epitope_Rep2 1047.53893144819 1047.5378299358601 88.162 2 -0.11348859866277795 0.02830673198482933 0.3485244200084945 ['ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 12102 10024 DIAENCNGTSP True H1975_Epitope_Rep2 1119.45025266643 1119.44914993586 43.548 2 -0.11350774250471334 0.028325366412515308 0.3485876689348367 ['ENSG00000197140|ENST00000379907|ADAM32'] 135983 14053 WQLQDDKNQSL True PC9_epitope_Rep2 1373.6575430107298 1373.65644993586 59.333 2 -0.11360948732499453 0.028325366412515308 0.3489238671233348 ['ENSG00000119655|ENST00000555619|NPC2'] 127658 10016 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 43.505 1 -0.1137283214966456 0.028343439530703746 0.34931663113970796 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 5223 19047 ALPEDLVEV True PC9_epitope_Rep6 983.5175272972699 983.51642993586 85.909 2 -0.11380983217824892 0.028343439530703746 0.3495860958516729 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 120192 9313 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48528496793 40.783 1 -0.11381003068411051 0.028343439530703746 0.34958675214829266 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF'] 68222 5854 LTEAAPPAPP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 27.531 2 -0.1138985336347014 0.028362630851273947 0.3498793878518253 ['ENSG00000188766|ENST00000691638|SPRED3'] 68700 13147 LTKMEQQQLE True PC9_epitope_Rep1 1246.62273772514 1246.6216499358602 55.435 2 -0.11397142720359646 0.028380700333774416 0.3501204540632285 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS', 'nc|ENSG00000119969|Q9NRZ9-6|HELLS', 'nc|ENSG00000119969|Q9NRZ9-5|HELLS', 'ENST00000462057.2_1_10:96313888-96330576:+|nuORF', 'nc|ENSG00000119969|Q9NRZ9-9|HELLS', 'nc|ENSG00000119969|Q9NRZ9-8|HELLS', 'nc|ENSG00000119969|Q9NRZ9-7|HELLS'] 67716 19465 LSWRLCFNQVL True PC9_epitope_Rep3 1377.72272654993 1377.7216299358602 80.1 2 -0.11397932245169673 0.028380700333774416 0.3501465667549629 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 109908 11858 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.41632993586 50.759 2 -0.11405559994958209 0.028380700333774416 0.3503988698402871 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 29507 24159 FVFPGELLL True PC9_epitope_Rep5 1033.5848190114498 1033.5837299358602 97.913 2 -0.11407126887350949 0.028399889402377847 0.3504507031822961 ['ENSG00000105281|ENST00000542575|SLC1A5'] 71692 12225 MEDLGGSLP True H1975_Epitope_Rep2 917.41643335701 917.4158849679301 52.106 1 -0.11412889994374338 0.028438265265818784 0.3506413640910799 ['ENST00000540056.5_1_12:16500716-16500800:+|nuORF'] 58340 9063 LENDEEQEALP True H1975_Epitope_Rep1 1285.5673905936499 1285.5662899358601 39.771 2 -0.11415944145398413 0.028438265265818784 0.35074241435254044 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 802 8983 AAYEHFETM True NCI_RA007_Epitope_Rep5 1097.4487961144498 1097.4476899358601 41.21 2 -0.11418487864204886 0.028456890082546704 0.3508265815038545 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 56109 10333 LATVTVRP True PC9_epitope_Rep3 855.5178020807899 855.51670993586 44.69 2 -0.11422498108466893 0.028456890082546704 0.3509592828862099 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 127410 6960 VNESVYNAT True H1975_Epitope_Rep2 995.4559896698701 995.45544496793 31.691 1 -0.11427560865511037 0.028474388847201926 0.3511268291232007 ['PCDH7|p.S844Y|1|0.3|ENSG00000169851|chr4:30723953-30723953|C/A|missense_variant'] 1762 7449 AEGSTYVP True H1975_Epitope_Rep2 822.3759484440199 822.3753949679301 33.597 1 -0.11432424501871265 0.028474388847201926 0.35128780307451035 ['KIF5B-MET|1|fusion', 'ENSG00000170759|ENST00000302418|KIF5B'] 84191 22259 PYLALLTIP True PC9_epitope_Rep4 999.60046907559 999.5998749679301 93.859 1 -0.11434150585272809 0.028474388847201926 0.3513449361202158 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17', 'nc|ENSG00000152942|O75943-4|RAD17', 'nc|ENSG00000152942|O75943-3|RAD17'] 107296 23869 SVLDLVVAL True PC9_epitope_Rep2 927.56408356687 927.56298993586 97.284 2 -0.11437326370135936 0.028474388847201926 0.3514500596100604 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 225 21094 AAFPGASLYL True PC9_epitope_Rep4 1008.5280324113198 1008.5274749679301 89.3 1 -0.11441627639570548 0.028491884847766852 0.3515924499491322 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 95694 16507 RYFKGPELL True PC9_epitope_Rep5 1121.6233297784897 1121.62222993586 68.492 2 -0.11445241532649374 0.028491884847766852 0.35171209544570486 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 72843 4874 M[Oxidation]PNGDHIVSA True PC9_epitope_Rep4 1055.47059456863 1055.46948993586 25.338 2 -0.1144692171573506 0.028491884847766852 0.351767724605274 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 36956 14954 GVMDGVPSA True PC9_epitope_Rep5 831.3796539254699 831.3791049679301 62.522 1 -0.11449228233889833 0.028491884847766852 0.3518440943690724 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 137717 8382 YELRAPVA True H1975_Epitope_Rep2 917.4970666362098 917.49596993586 37.195 2 -0.11453905698097458 0.028525742261528743 0.3519989787857445 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1'] 6473 9537 APSGNYVAC True PC9_epitope_Rep5 880.3749028981999 880.37435496793 41.644 1 -0.11455480152145682 0.028525742261528743 0.35205111703689496 ['ENSG00000114450|ENST00000232564|GNB4'] 98180 7239 SETAAIPSA True NCI_RA007_Epitope_Rep4 845.4130622287299 845.4125149679301 34.479 1 -0.11458061463495377 0.028525742261528743 0.35213660131673746 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 71868 4603 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 22.81 2 -0.11459900102875206 0.028525742261528743 0.3521974937088239 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 12614 14054 DLAGSIIGK True PC9_epitope_Rep4 872.4967322830399 872.49562993586 61.968 2 -0.11460256795003056 0.028525742261528743 0.3522093069815992 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 86483 5483 QKSLSLSPG True NCI_RA007_Epitope_Rep5 915.5025459394699 915.50199496793 27.778 1 -0.11465058226374851 0.028525742261528743 0.35236833419346253 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 9718 16422 AYGNVFSAF True NCI_RA007_Epitope_Rep4 974.4497820906199 974.44868993586 71.175 2 -0.11466851535131493 0.028525742261528743 0.35242773419481677 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 138722 19939 YIPTELDQV True PC9_epitope_Rep3 1076.53899101784 1076.53847496793 81.938 1 -0.11468812750465734 0.028525742261528743 0.35249269839605296 ['ENSG00000149100|ENST00000531120|EIF3M'] 60920 18116 LIALLEVLSQK True NCI_RA007_Epitope_Rep1 1225.76457427857 1225.76346993586 74.609 2 -0.11469167303267415 0.028525742261528743 0.3525044430572403 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 103198 19407 SPIPSIPEI True PC9_epitope_Rep6 951.52769805815 951.52660993586 87.305 2 -0.11470636809563278 0.028525742261528743 0.35255312181463694 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 48326 15360 IYSENSVSI True PC9_epitope_Rep1 1010.49204082542 1010.49147496793 63.899 1 -0.11473062289203147 0.028564096490189112 0.35263347141526 ['ENST00000544520.5_1_15:72546082-72558314:-|nuORF', 'nc|ENSG00000137817|Q2NL67-3|PARP6', 'nc|ENSG00000137817|Q2NL67-2|PARP6', 'ENSG00000137817|ENST00000569795|PARP6'] 11918 9640 DHLPNAAL True PC9_epitope_Rep6 849.43446637965 849.43336993586 47.428 2 -0.11475177162938928 0.028564096490189112 0.3527035348722845 ['ENSG00000101577|ENST00000677752|LPIN2'] 35114 7039 GQVTEAVKV True PC9_epitope_Rep4 929.5181960036099 929.51708993586 34.328 2 -0.11477042362964672 0.02858327246886042 0.3527653295323788 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 94470 22666 RRRRRLWRWWW True PC9_epitope_Rep5 1812.0185466018697 1812.0174499358602 92.187 2 -0.11484648744216612 0.028602447690485592 0.35301735670981865 ['chr12:54283228-54283827|536|15.08|0.0|20.52|+|1|HNRNPA1,HNRNPA1|2'] 6213 3980 APPHELTEEEK True NCI_RA007_Epitope_Rep2 1278.60919583598 1278.6075449037899 20.118 3 -0.11487749571903712 0.028620492272467088 0.353120110129286 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000470286.1_1_2:172571934-172582592:+|nuORF'] 137630 6043 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.37596993586 28.258 2 -0.11491901499457209 0.028620492272467088 0.3532577048530076 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 71132 20461 LYLPSFFTY True NCI_RA007_Epitope_Rep4 1149.57464825057 1149.5740749679298 88.611 1 -0.11492116483642693 0.028620492272467088 0.3532648297500466 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 46356 12468 ISRGTTEIL True PC9_epitope_Rep2 988.55530978832 988.55420993586 53.269 2 -0.11502170127532074 0.028676310959363713 0.35359805864902366 ['ENST00000459899.1_1_14:35857513-35858113:-|nuORF'] 135099 8278 WEEAGPPSA True H1975_Epitope_Rep2 942.4083112014598 942.40720993586 36.792 2 -0.11506874073635678 0.028676310959363713 0.35375399558800247 ['ENSG00000101191|ENST00000395343|DIDO1'] 86687 19889 QLIKELPEL True PC9_epitope_Rep3 1081.63831113629 1081.63720993586 81.743 2 -0.11508515764625502 0.028676310959363713 0.3538084216657691 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 31616 11083 GEFEHVFEA True H1975_Epitope_Rep2 1063.4610750503098 1063.45996993586 47.664 2 -0.1151069264640215 0.028676310959363713 0.3538805935209262 ['ENSG00000178814|ENST00000618853|OPLAH'] 138413 14436 YHHGYSYIL True PC9_epitope_Rep3 1151.53999407735 1151.5383449037902 60.633 3 -0.11510820938172754 0.028676310959363713 0.35388484698063055 ['ENSG00000134531|ENST00000256951|EMP1'] 48479 3971 KAFNQGKIFK True NCI_RA007_Epitope_Rep5 1179.67642798051 1179.67477490379 21.636 3 -0.11511087454483009 0.028676310959363713 0.3538936832533906 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 34735 4855 GQENLKTDL True PC9_epitope_Rep4 1016.51383889916 1016.51274993586 25.263 2 -0.11516474568009058 0.028711249679341713 0.354072302052582 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'STRN4|p.V351Sfs*20|1|0.27|ENSG00000090372|chr19:46727996-46727996|C/-|frameshift_variant'] 7890 10825 ATAGVVTSV True PC9_epitope_Rep1 803.43888305375 803.43778993586 46.524 2 -0.11520766414360374 0.028711249679341713 0.3542146198331071 ['ENSG00000013588|ENST00000014914|GPRC5A', 'GPRC5A|p.S110Cfs*42|1|0.47|ENSG00000013588|chr12:12908577-12908578|-/G|frameshift_variant', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 106078 3285 STARLWDHKK True NCI_RA007_Epitope_Rep4 1240.6676542019597 1240.66600490379 18.329 3 -0.1152114979876599 0.028711249679341713 0.35422733349450863 ['ENST00000529974.1_1_11:88068229-88070878:-|nuORF'] 128195 20033 VPMEIHFMEA True PC9_epitope_Rep3 1202.54640198074 1202.5453099358601 82.306 2 -0.11521472384672543 0.028711249679341713 0.3542380310558539 ['ENST00000472678.1_1_2:61258678-61258789:+|nuORF'] 35765 16493 GTIGLIHAI True PC9_epitope_Rep4 893.53345214493 893.53234993586 71.41 2 -0.11523515061956163 0.028711249679341713 0.35430577178520667 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 71418 21159 LYTEAIKFF True PC9_epitope_Rep1 1130.60119735158 1130.60010993586 86.222 2 -0.11527275459748104 0.028711249679341713 0.3544304843346858 ['nc|ENSG00000038532|Q2KHT3-2|CLEC16A', 'ENSG00000038532|ENST00000409790|CLEC16A'] 8745 20964 AVDAFFTAV True PC9_epitope_Rep4 939.4701831820299 939.46908993586 88.799 2 -0.11527528105880824 0.028711249679341713 0.35443886362361404 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 53721 13125 KSKRRSCS True NCI_RA007_Epitope_Rep5 950.50798275642 950.50688993586 57.162 2 -0.11527627888425113 0.028711249679341713 0.35444217303438963 ['ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 45229 6500 IPTDNQIKA True PC9_epitope_Rep4 998.53965972418 998.53856993586 32.123 2 -0.1153000438518193 0.028749013417521705 0.354520994501157 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1'] 114619 19717 TQDSSILPL True PC9_epitope_Rep4 972.5127762699999 972.51222496793 83.965 1 -0.1153095203228855 0.028749013417521705 0.3545524262779332 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 45180 10663 IPQLNSKAV True PC9_epitope_Rep3 968.5654805492 968.56438993586 45.962 2 -0.11532444684327788 0.028749013417521705 0.35460193615818286 ['ENSG00000157456|ENST00000288207|CCNB2'] 121993 16175 VFVDSVPEF True NCI_RA007_Epitope_Rep5 1037.5069626135698 1037.5058699358601 68.958 2 -0.11537862752631156 0.02876704220350019 0.35478166132917266 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'ENST00000520983.5_1_8:28651295-28747426:-|nuORF'] 130494 8333 VSPSLLEKDP True NCI_RA007_Epitope_Rep3 1083.58119018299 1083.58008993586 39.893 2 -0.11538936063245943 0.02876704220350019 0.35481726699087285 ['ENSG00000166263|ENST00000376352|STXBP4', 'STXBP4|p.H432Qfs*12|1|0.07|ENSG00000166263|chr17:55078184-55078185|-/G|frameshift_variant'] 33856 16366 GLPHGFCTV True PC9_epitope_Rep5 929.44292288837 929.44182993586 67.95 2 -0.11540892632766403 0.02876704220350019 0.35488217563470603 ['ENSG00000145391|ENST00000274031|SETD7'] 114317 22579 TPQSIFIFA True PC9_epitope_Rep2 1022.5436824754598 1022.5431749679301 92.349 1 -0.115480600207628 0.028786204719438088 0.3551199741292487 ['ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 103668 6566 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 30.669 2 -0.11553640069443184 0.02880479816911968 0.3553051324500814 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 78846 19535 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.4219549679301 79.964 1 -0.11560888345159766 0.02880479816911968 0.35554567792701375 ['ENSG00000163807|ENST00000296121|KIAA1143'] 118226 10350 TYLDKIKKF True PC9_epitope_Rep6 1154.66994561774 1154.6683049037902 50.528 3 -0.11563946363196966 0.028822821519461816 0.35564717380588995 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 133607 23456 VYADGIFDLF True PC9_epitope_Rep4 1158.55972646242 1158.5586299358602 98.511 2 -0.11564072721140652 0.028822821519461816 0.3556513677734506 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF'] 44574 18337 ILPKVIYRF True PC9_epitope_Rep5 1147.7117508600697 1147.7101049037901 75.548 3 -0.11565006458816884 0.028822821519461816 0.355682359952203 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|9|1|sense', 'chr3:98867438-98881540|151|18.55|0.23|6.34|-|1|TE_info:L1PA5,L1PA5_dup2059,L1,LINE,acceptor,-,98865721,98867438|None,DCBLD2|4', 'L1PA3_dup1115|chr2:110017555-110020014:+|1.8409101932023448|0.4680770941019235|1.98|537.0|62|3|sense', 'L1PA3_dup1120|chr2:110351377-110353837:-|1.2372248013512652|0.4358200479832063|1.51|529.0|67|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|163|3|sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|45|1|sense', 'nc|ENSG999|O00370|L1_ORF2', 'L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|40|3|sense', 'L1PA4_dup9334|chr12:12409221-12411354:-|1.3393414808808248|0.0111968938891953|6.9|450.0|23|2|sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|176|3|sense'] 15212 6475 EADSIAAVA True H1975_Epitope_Rep2 845.4130622287299 845.4125149679301 29.822 1 -0.11567005774285365 0.028874600607471105 0.35574872227388765 ['nc|ENSG00000067208|O60447|EVI5', 'nc|ENSG00000067208|O60447-2|EVI5', 'ENSG00000067208|ENST00000684568|EVI5'] 126429 13297 VLKLLSEDP True PC9_epitope_Rep1 1012.580461907 1012.57936993586 56.011 2 -0.11570654378448966 0.028874600607471105 0.35586983563041524 ['ENSG00000178814|ENST00000618853|OPLAH'] 112386 20212 TLASNAIILI True PC9_epitope_Rep1 1027.62774645259 1027.62664993586 82.574 2 -0.11576057985114324 0.028874600607471105 0.3560492218559602 ['nc|ENSG00000249730|P0C629|OR10J4'] 6683 8918 AQAAALYKV True PC9_epitope_Rep4 933.5283667644899 933.52726993586 41.844 2 -0.11576840555406394 0.028874600607471105 0.35607520286792527 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 114311 11782 TPQPPLLKA True PC9_epitope_Rep5 963.5753169569099 963.57420993586 50.317 2 -0.1157694914097791 0.028874600607471105 0.3560788078969212 ['ENSG00000155561|ENST00000285968|NUP205'] 133462 18195 VVYQDGFYGA True PC9_epitope_Rep5 1117.50802524273 1117.5069299358602 74.996 2 -0.11577193157867266 0.028874600607471105 0.356086909259768 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 132108 9002 VTVAAETVLAA True H1975_Epitope_Rep1 1043.58627556343 1043.5851699358602 39.532 2 -0.11577994784121175 0.028874600607471105 0.35611352354120474 ['ENST00000360415.7_1_7:65617938-65618154:+|nuORF'] 83599 17171 PVCPPGGIQEV True PC9_epitope_Rep3 1094.5430308524599 1094.54192993586 71.205 2 -0.11579853803592978 0.028874600607471105 0.35617524532802997 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 14525 8613 DTNADKQLSF True NCI_RA007_Epitope_Rep3 1137.53021723929 1137.52912993586 40.956 2 -0.11580013795268887 0.028874600607471105 0.35618055736199267 ['ENSG00000163220|ENST00000368738|S100A9'] 103013 9828 SPFPGHVGA True PC9_epitope_Rep1 867.42390169595 867.42280993586 42.666 2 -0.11580899194226678 0.028874600607471105 0.356209954636645 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 6489 7250 APSPATAAATA True PC9_epitope_Rep5 927.4661604307499 927.46506993586 32.85 2 -0.11586932817602402 0.028874600607471105 0.35641029881466574 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 125048 6652 VIDPVAPR True NCI_RA007_Epitope_Rep1 865.5021520166499 865.50104993586 29.887 2 -0.11591482175988134 0.028874600607471105 0.3565613747155741 ['ENSG00000136628|ENST00000366923|EPRS1'] 237 19864 AAFVHFYGV True PC9_epitope_Rep5 1009.5021520166498 1009.50104993586 81.457 2 -0.11591534008688835 0.028874600607471105 0.35656309606511755 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 83603 17330 PVCPPGGIQEV True PC9_epitope_Rep5 1094.5430308524599 1094.54192993586 71.659 2 -0.11594285183398831 0.0288937538212729 0.3566544643948553 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 31046 14511 GATDIALA True NCI_RA007_Epitope_Rep1 730.3861192049 730.3855749679301 60.491 1 -0.11600967552579242 0.02890948530861763 0.35687641138627246 ['ENST00000473361.5_1_1:32259103-32263870:-|nuORF', 'ENSG00000182070|ENST00000380367|OR52A1'] 5843 16120 APFGGFKMS True PC9_epitope_Rep3 940.4476739156399 940.44656993586 67.156 2 -0.1160581414793392 0.02890948530861763 0.3570374039792245 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 104625 16899 SQSSLIHLV True PC9_epitope_Rep3 982.5447451046201 982.54364993586 70.159 2 -0.11608720758598538 0.02890948530861763 0.35713396231449374 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 141318 2785 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61269490379 14.743 3 -0.11611775850812833 0.02890948530861763 0.3572354593026875 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 1900 13460 AEIGAVTLVSA True H1975_Epitope_Rep3 1029.57062549929 1029.5695299358601 57.047 2 -0.1161679193955252 0.02890948530861763 0.3574021184208225 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 2317 6918 AEPGALASA True H1975_Epitope_Rep2 785.39193286133 785.3913849679301 31.531 1 -0.1161702400151663 0.02890948530861763 0.3574098290636038 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 9938 14922 AYMPHTFFI True NCI_RA007_Epitope_Rep5 1125.53173789277 1125.53064993586 64.064 2 -0.11618594340305884 0.02890948530861763 0.35746200710626697 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L696F|1|0.09|ENSG00000147162|chrX:71562957-71562957|G/C|missense_variant', 'nc|ENSG00000147162|O15294-4|OGT'] 60810 7600 LHSSPGASL True PC9_epitope_Rep3 867.44503106335 867.44392993586 34.232 2 -0.11622437288358088 0.028927493936465994 0.3575897045959086 ['ENST00000571846.5_2_17:7762991-7763075:+|nuORF'] 54630 9200 KYLEERAMRQF True PC9_epitope_Rep6 1469.74491854649 1469.74327490379 45.523 3 -0.11623343801810802 0.028927493936465994 0.35761982859506464 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 119669 9795 VAVEPGAAV True PC9_epitope_Rep6 811.4439684341899 811.44286993586 48.128 2 -0.11624900620844994 0.028927493936465994 0.35767156391534566 ['ENSG00000171421|ENST00000505059|MRPL36'] 76515 6711 NQIKKIENL True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 31.226 2 -0.11630716774690227 0.02894150582575952 0.3578648571644104 ['nc|ENSG00000115685|Q15435-2|PPP1R7', 'ENSG00000115685|ENST00000234038|PPP1R7', 'nc|ENSG00000115685|Q15435-5|PPP1R7', 'nc|ENSG00000115685|Q15435-4|PPP1R7', 'nc|ENSG00000115685|Q15435-3|PPP1R7'] 33421 8634 GLAEVAAAV True NCI_RA007_Epitope_Rep1 799.4439684341899 799.44286993586 37.586 2 -0.11632589583405119 0.02894150582575952 0.35792710257342736 ['ENSG00000170684|ENST00000303809|ZNF296'] 87141 5026 QPATATAATAA True PC9_epitope_Rep5 972.4876241513199 972.48652993586 24.362 2 -0.11633445081047526 0.02894150582575952 0.3579555369984053 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 108874 9958 TAAHGLEL True PC9_epitope_Rep1 810.42356734278 810.42246993586 43.166 2 -0.11634285925648524 0.02894150582575952 0.3579834848650059 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 12 4594 AAAAAAAKVPA True PC9_epitope_Rep5 910.5236157372199 910.52250993586 22.73 2 -0.11635515078494571 0.02894150582575952 0.35802434009903883 ['ENSG00000188846|ENST00000396203|RPL14'] 70965 13162 LYGRHFNYL True PC9_epitope_Rep2 1181.59817765981 1181.59654490379 55.9 3 -0.11637452996768084 0.02894150582575952 0.3580887556701859 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 30079 18403 FYISPVNKL True PC9_epitope_Rep1 1079.60153170475 1079.6004299358601 75.576 2 -0.11641236949560939 0.02894150582575952 0.35821453974003414 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 35591 11089 GTAPALAGL True H1975_Epitope_Rep1 769.43340375049 769.4328549679301 47.617 1 -0.11641653949603814 0.02894150582575952 0.3582284019994874 ['ENST00000448759.1_1_1:43352460-43353038:-|nuORF'] 63797 18829 LNGQLPLN True PC9_epitope_Rep3 867.48141657207 867.4808649679301 77.649 1 -0.11643255705247506 0.02894150582575952 0.35828164994101674 ['ENSG00000189108|ENST00000372582|IL1RAPL2', 'IL1RAPL2|p.N657K|1|0.06|ENSG00000189108|chrX:105767571-105767571|C/G|missense_variant', 'IL1RAPL2|p.L648Q|1|0.44|ENSG00000189108|chrX:105767543-105767543|T/A|missense_variant'] 87807 7156 QREAEQSNVAL True PC9_epitope_Rep1 1243.61567819875 1243.61458993586 32.336 2 -0.11644609911245618 0.02894150582575952 0.358326669779576 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 73880 11886 NATTVVTTV True PC9_epitope_Rep5 904.48656152216 904.48546993586 50.718 2 -0.11647478164496324 0.028960078856579596 0.3584220272523506 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 44896 22191 INLTQISTL True PC9_epitope_Rep1 1001.5757108797301 1001.5746099358599 90.178 2 -0.11649061333533545 0.028960078856579596 0.3584746633305336 ['ENSG00000135077|ENST00000307851|HAVCR2'] 42668 8571 IEIAKNYNV True H1975_Epitope_Rep3 1062.57095985246 1062.5698699358602 37.959 2 -0.11649889678138098 0.028975794370417095 0.35850220419489354 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'ENST00000587765.1_1_19:38282860-38283352:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 142439 19632 YYFEGIKQTF True PC9_epitope_Rep2 1294.6233893481397 1294.6217549037901 80.9 3 -0.11653267885673221 0.028975794370417095 0.3586145277302931 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 133469 6391 VVYTSHLQLK True NCI_RA007_Epitope_Rep3 1186.6710082469 1186.66936490379 32.143 3 -0.11655997218655288 0.028975794370417095 0.3587052819755138 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'RGPD4|p.V610Ffs*5|1|0.07|ENSG00000196862|chr2:107860831-107860831|G/-|frameshift_variant', 'RGPD4|p.M814Ifs*6|1|0.37|ENSG00000196862|chr2:107863005-107863005|G/-|frameshift_variant', 'RGPD3|p.H839Ifs*29|1|0.29|ENSG00000153165|chr2:106429736-106429736|G/-|frameshift_variant', 'ENST00000522286.5_1_2:113158797-113161561:-|nuORF', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 121525 11289 VFAHTDNMVF True NCI_RA007_Epitope_Rep3 1179.5382798251899 1179.5371899358602 51.517 2 -0.11662007617663966 0.028975794370417095 0.35890515346221896 ['ENSG00000179913|ENST00000318683|B3GNT3'] 82477 6063 PPQPPPPPP True NCI_RA007_Epitope_Rep5 922.4912529797799 922.49014993586 30.003 2 -0.11662407973040727 0.028975794370417095 0.3589184678249704 ['HOXD3|p.S341Tfs*88|1|0.15|ENSG00000128652|chr2:176171993-176171996|GCGA/-|frameshift_variant', 'ENSG00000128652|ENST00000683222|HOXD3', 'ENSG00000077044|ENST00000264057|DGKD', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'DGKD-SAG|2|fusion', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 139554 19777 YLTSSWLTL True PC9_epitope_Rep5 1082.56481184286 1082.56370993586 81.117 2 -0.11669505073998739 0.028975794370417095 0.35915450881112054 ['ENSG00000181104|ENST00000319211|F2R'] 142731 9665 YYQHIVTTL True NCI_RA007_Epitope_Rep3 1136.5866099166 1136.58550993586 45.095 2 -0.11672525919938062 0.028975794370417095 0.3592549883750104 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 68705 14894 LTKPHTLPLS True PC9_epitope_Rep5 1105.64954452633 1105.64844993586 62.293 2 -0.11676284758726457 0.028994934263694244 0.35938002332581004 ['ENST00000576017.1_1_17:7306563-7306632:-|nuORF'] 126681 19333 VLPDDLSGV True PC9_epitope_Rep2 913.47566248529 913.47456993586 79.738 2 -0.11685354934347898 0.029033211786734996 0.35968177336151236 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 82263 5956 PPGAPPPPPP True NCI_RA007_Epitope_Rep5 922.4912529797799 922.49014993586 29.593 2 -0.11686530474736073 0.029033211786734996 0.35972088555184456 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'ENST00000413725.5_1_11:64533292-64535069:-|nuORF'] 140109 8311 YQNQEIHNL True PC9_epitope_Rep2 1157.5465360097699 1157.54542993586 37.333 2 -0.11690803094539604 0.029072059287291074 0.35986305019994624 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 139942 18846 YQAPDIDVQL True PC9_epitope_Rep6 1160.57135377528 1160.57077496793 85.137 1 -0.116924868476659 0.029088902465461856 0.35991907762426606 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 21003 4348 EQRNRLYKK True NCI_RA007_Epitope_Rep4 1233.6942033029698 1233.69256490379 23.071 3 -0.11693627853044765 0.029088902465461856 0.3599570459737094 ['ENST00000515466.1_1_5:43576000-43602992:-|nuORF'] 71789 5357 MEGKVPVAA True H1975_Epitope_Rep3 900.4738886634798 900.47278993586 25.671 2 -0.11697007305859854 0.029088902465461856 0.3600695062771143 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 92619 5537 RNAGDEVTI True PC9_epitope_Rep4 973.48287312405 973.48176993586 28.061 2 -0.11697314468986482 0.029088902465461856 0.3600797283104632 ['ENSG00000172554|ENST00000308624|SNTG2'] 9227 15712 AVNPRFVAI True PC9_epitope_Rep1 985.5709002828099 985.56980993586 65.259 2 -0.11697736168855596 0.029088902465461856 0.3600937620920369 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C', 'CORO1C|p.I50M|1|0.27|ENSG00000110880|chr12:108701169-108701169|T/C|missense_variant', 'ENST00000551059.1_1_12:109094839-109125250:-|nuORF', 'CORO1C|p.N153Mfs*9|1|0.19|ENSG00000110880|chr12:108658892-108658910|TTCCAGATGATAATGGCAT/-|frameshift_variant'] 94539 8568 RRRRWWSVTWW True NCI_RA007_Epitope_Rep2 1673.8803813632098 1673.87928993586 37.972 2 -0.11699532755922462 0.029108036734854754 0.36015355211792943 ['ENST00000380486.3_2_21:43339056-43362335:-|nuORF'] 36218 15538 GVCSPTDIGV True PC9_epitope_Rep4 946.4429824580199 946.44188993586 67.691 2 -0.11702624916802347 0.02912200504413619 0.36025646337143147 ['ENST00000564439.5_1_15:66795703-66797150:-|nuORF'] 25652 7147 FEQEMATA True NCI_RA007_Epitope_Rep4 925.3851332287298 925.38402993586 34.112 2 -0.11704329173840747 0.02912200504413619 0.3603131859272248 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000428275.1_1_X:53172253-53172460:-|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 82036 19805 PLWGGVLI True H1975_Epitope_Rep1 853.5061747679299 853.50506993586 82.42 2 -0.11705787872983901 0.02912200504413619 0.36036173707895824 ['nc|ENSG00000018280|P49279-2|SLC11A1', 'ENSG00000018280|ENST00000233202|SLC11A1', 'ENST00000494322.5_1_2:219247091-219256951:+|nuORF', 'nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 106720 8718 [Acetylation]-STVHEILC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep5 1127.56449516876 1127.5633899358602 40.198 2 -0.11711629614295718 0.02912200504413619 0.3605561863649355 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 5275 4394 ALQASALK True NCI_RA007_Epitope_Rep5 800.47560291564 800.4745099358599 23.53 2 -0.11711723798627431 0.02912200504413619 0.36055932157925613 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 34284 11619 GPAAAFTAA True PC9_epitope_Rep2 775.38645355807 775.3859049679301 50.018 1 -0.11713552059208845 0.02912200504413619 0.3606201819518986 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 84150 16782 PYFNAPVYL True NCI_RA007_Epitope_Rep4 1082.5436824754597 1082.5425899358602 72.736 2 -0.11713995268840267 0.02912200504413619 0.36063493613185404 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 44091 9528 IINEPTAAA True PC9_epitope_Rep5 898.4759968384599 898.47488993586 41.608 2 -0.11714351784948533 0.02912200504413619 0.36064680442713903 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 119683 4815 VAVKGYSKT True NCI_RA007_Epitope_Rep5 951.5389314481899 951.53782993586 25.209 2 -0.11715745065104576 0.02912200504413619 0.36069318700195124 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 81806 12027 PLPPPPPPP True PC9_epitope_Rep5 907.51673945163 907.51564993586 51.256 2 -0.11717724693884417 0.02912200504413619 0.36075909134904216 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A', 'nc|ENSG00000146083|Q7L0R7-2|RNF44', 'nc|ENSG00000110076|P58401|NRXN2', 'ENSG00000204334|ENST00000697325|ERICH2', 'ENSG00000146083|ENST00000274811|RNF44', 'ENST00000508096.1_1_10:126605730-126631034:+|nuORF', 'JUND|p.G86Sfs*101|1|0.19|ENSG00000130522|chr19:18281196-18281229|TCAGCAGCCCCAGGTCGGGAGAGGCGAGCAGGCC/-|frameshift_variant', 'ENST00000508478.1_1_5:175957081-175957609:-|nuORF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'ENSG00000100312|ENST00000216139|ACR', 'nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000138771|ENST00000296043|SHROOM3', 'ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B', 'ENSG00000152217|ENST00000649279|SETBP1', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENST00000596700.5_1_19:50084718-50093643:+|nuORF', 'ENST00000597121.5_1_19:50086773-50093643:+|nuORF', 'ENSG00000126460|ENST00000246794|PRRG2', 'ENSG00000259956|ENST00000563281|RBM15B'] 71668 17102 MEALPLLAA True H1975_Epitope_Rep3 927.5099398190299 927.50884993586 71.403 2 -0.11723635512315377 0.02913883799278917 0.3609558846855903 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 102223 11005 SLSEISNPE True PC9_epitope_Rep2 974.4556553167 974.45454993586 47.652 2 -0.11723701047745941 0.02913883799278917 0.3609580667294936 ['ENSG00000150907|ENST00000379561|FOXO1'] 132361 5626 VVAAHLAGA True PC9_epitope_Rep4 807.46028720467 807.45918993586 28.438 2 -0.11725400282033391 0.02913883799278917 0.36101464476087053 ['ENSG00000160161|ENST00000291495|CILP2'] 86022 10598 QHQEHFIQM True PC9_epitope_Rep3 1196.5396768075198 1196.53804490379 45.712 3 -0.11730203690112093 0.02913883799278917 0.3611745897755206 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 97335 4678 SEAQPPESP True H1975_Epitope_Rep3 940.4137905047199 940.41268993586 23.118 2 -0.11734500812137168 0.02913883799278917 0.3613176886255655 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 134866 18968 VYVPHIHVW True PC9_epitope_Rep1 1148.6130994479597 1148.61145490379 77.744 3 -0.11735543577224672 0.02915566762538907 0.3613524155840876 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF'] 132366 5326 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 28.318 2 -0.11736127154004498 0.02915566762538907 0.3613718506001865 ['ENSG00000160161|ENST00000291495|CILP2'] 28597 14184 FSGPAITL True NCI_RA007_Epitope_Rep4 804.43815477776 804.43760496793 61.838 1 -0.11740825991026842 0.02915566762538907 0.3615283450039704 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 35101 7640 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 36.768 2 -0.11741378449390887 0.02915566762538907 0.36154674549288235 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 127806 11794 VPEFVHNVA True PC9_epitope_Rep4 1010.5185303567799 1010.51742993586 53.135 2 -0.1174290986389541 0.02915566762538907 0.3615977526407252 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant'] 128926 22378 VQIDGLVVL True PC9_epitope_Rep2 954.5749826037398 954.5744349679301 91.571 1 -0.1174614341307316 0.029172493942915673 0.36170545795021863 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF'] 107348 11244 SVLGKVNEI True PC9_epitope_Rep6 957.54949613189 957.54838993586 54.247 2 -0.11747412873464413 0.029172493942915673 0.3617477438009971 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 70962 17925 LYGPSSVSF True PC9_epitope_Rep6 955.46509780159 955.46400993586 81.575 2 -0.11749072019634972 0.029172493942915673 0.3618030116344124 ['ENSG00000149257|ENST00000358171|SERPINH1'] 7011 14499 AQLTSTPAI True PC9_epitope_Rep5 900.4916469026 900.49054993586 60.77 2 -0.11749116196577329 0.029172493942915673 0.3618044832363341 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 22299 10007 ETDKITLEV True H1975_Epitope_Rep2 1046.54955570154 1046.5484499358602 43.481 2 -0.11750305567273892 0.029172493942915673 0.36184410345999274 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 47285 10747 IVDKTIINA True PC9_epitope_Rep5 985.5807962601699 985.57968993586 46.33 2 -0.11751065367221197 0.029187017488577282 0.36186941431633957 ['ENSG00000221823|ENST00000234310|PPP3R1'] 96793 8462 SAQGNHIPL True PC9_epitope_Rep5 935.4824792012299 935.48138993586 37.493 2 -0.11752634613845273 0.029187017488577282 0.361921691021357 ['ENST00000337198.9_1_8:103876093-103876378:-|nuORF'] 97872 6696 SELQEEVP True NCI_RA007_Epitope_Rep5 929.43419159613 929.43308993586 32.427 2 -0.11754016095021745 0.029187017488577282 0.36196771391341903 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 6466 13202 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37943496793 55.788 1 -0.11757998782180384 0.029187017488577282 0.3621004004296006 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 19002 6851 ELERQREEERR True H1975_Epitope_Rep1 1528.7706157003597 1528.7689649037902 31.396 3 -0.11758992762533521 0.029187017488577282 0.3621335172378661 ['nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'ITSN1|p.E686Hfs*57|1|0.07|ENSG00000205726|chr21:33797480-33797481|-/ACATT|frameshift_variant', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'ITSN1|p.G1004Ffs*20|1|0.1|ENSG00000205726|chr21:33819308-33819309|-/TCGTT|frameshift_variant', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1'] 136913 17768 YAFPKSITV True PC9_epitope_Rep2 1024.5593325395998 1024.55822993586 73.631 2 -0.11763670288122081 0.029187017488577282 0.3622893682709832 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1', 'SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 120300 6046 VEDRKEVLG True H1975_Epitope_Rep3 1043.56112344475 1043.56002993586 28.269 2 -0.11764513288476428 0.029187017488577282 0.3623174577365946 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.C1821Vfs*7|1|0.06|ENSG00000007174|chr17:11705093-11705094|-/G|frameshift_variant', 'DNAH9|p.V1997Ffs*6|1|0.82|ENSG00000007174|chr17:11742190-11742190|G/-|frameshift_variant', 'DNAH9|p.K2222Sfs*9|1|0.17|ENSG00000007174|chr17:11752883-11752883|C/-|frameshift_variant'] 112201 19893 TKIDSWNCK True PC9_epitope_Rep5 1093.52262976105 1093.5215299358601 81.57 2 -0.117666830135574 0.029187017488577282 0.3623897567767275 ['ENST00000255390.9_1_17:10584188-10584290:-|nuORF'] 85335 6117 QESPPAAAV True H1975_Epitope_Rep3 868.4290466460399 868.4279499358599 28.541 2 -0.11768178619563638 0.029187017488577282 0.3624395946768044 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 102058 4333 SLQYRLRRER True NCI_RA007_Epitope_Rep2 1375.7796642624296 1375.77802490379 21.493 3 -0.11781058071230703 0.02924552454851606 0.36286883196283676 ['CEBPE|p.E206Q|1|0.06|ENSG00000092067|chr14:23117717-23117717|C/G|missense_variant'] 70371 6888 LVSWGAGC[Carbamidomethyl]QKS True NCI_RA007_Epitope_Rep2 1191.57064286206 1191.56954993586 31.41 2 -0.11785311275876287 0.029279146238210565 0.3630106020761492 ['nc|ENSG00000283706|Q9UI38|PRSS50'] 872 7030 ADGVASTPSLN True NCI_RA007_Epitope_Rep5 1030.49310345458 1030.49200993586 33.719 2 -0.11800952773863381 0.029279146238210565 0.3635320676566135 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-8|MECOM', 'nc|ENSG00000085276|Q03112-9|MECOM', 'ENST00000485957.1_1_3:168867411-169381160:-|nuORF'] 107189 23222 SVINFLDQL True PC9_epitope_Rep2 1047.5600608155898 1047.5594749679299 94.805 1 -0.11802142083767975 0.029279146238210565 0.3635717236500001 ['ENSG00000196976|ENST00000357360|LAGE3'] 37702 10763 GVYNGKTFNQV True PC9_epitope_Rep2 1225.60913626633 1225.60802993586 46.718 2 -0.11802354688181864 0.029279146238210565 0.3635788127580555 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 137815 4292 YEQNQSDVNEA True H1975_Epitope_Rep3 1295.52658841083 1295.5254899358602 21.624 2 -0.118051551258385 0.029279146238210565 0.36367219344978946 ['ENST00000473460.1_1_20:25394446-25397839:+|nuORF', 'ENSG00000101003|ENST00000262460|GINS1'] 134522 4123 VYQNHVQHL True NCI_RA007_Epitope_Rep4 1136.57269118796 1136.5715899358602 22.146 2 -0.11806017586208738 0.029279146238210565 0.3637009531750081 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 12949 10465 DLLDSQVQY True H1975_Epitope_Rep2 1079.51350454599 1079.5124099358602 45.271 2 -0.11808037192542224 0.029279146238210565 0.36376830100876095 ['nc|ENSG00000156735|O95429-2|BAG4', 'ENSG00000156735|ENST00000287322|BAG4'] 96849 5007 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 25.881 2 -0.11809015365988176 0.029279146238210565 0.3638009210530256 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 15097 5846 DYVDRTGN True NCI_RA007_Epitope_Rep2 938.4093738306201 938.40826993586 27.357 2 -0.11809790815004755 0.029279146238210565 0.3638267810700746 ['ENSG00000124772|ENST00000244751|CPNE5', 'nc|ENSG00000124772|Q9HCH3-2|CPNE5'] 21329 15911 ERFEIPIKV True PC9_epitope_Rep6 1129.6495445263297 1129.64788490379 73.485 3 -0.11815801047930115 0.029279146238210565 0.36402722524836856 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 82643 15118 PQLFQSTI True NCI_RA007_Epitope_Rep5 932.4967322830399 932.49562993586 64.818 2 -0.11820184884831272 0.029296528912602628 0.3641734420141186 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 61540 7912 LKGEATVSFDD True NCI_RA007_Epitope_Rep4 1180.5611830144 1180.56008993586 37.173 2 -0.11823981243401711 0.029296528912602628 0.3643000735613705 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 35090 8573 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 37.813 2 -0.11824440862256451 0.029296528912602628 0.3643154052184351 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 15133 8766 EAAAAVVAAAA True H1975_Epitope_Rep2 913.4868958753299 913.48578993586 38.683 2 -0.1182562100110523 0.029296528912602628 0.36435477207573785 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 2285 11654 AENVPPVIP True H1975_Epitope_Rep1 934.5123823471799 934.5118349679301 49.817 1 -0.11829631847421573 0.029315640258308396 0.36448857137308144 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 76278 17634 NPLGMPVPAA True PC9_epitope_Rep6 965.5004377644899 965.49934993586 80.469 2 -0.11836022926475567 0.029333595826360862 0.3647017935326065 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 142845 19714 YYTDIMHTL True PC9_epitope_Rep2 1155.5270464351497 1155.52647496793 81.219 1 -0.11837366496380684 0.029333595826360862 0.3647466214274247 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 140900 13914 YSEEIVEMY True H1975_Epitope_Rep1 1161.4899922200898 1161.48947496793 58.672 1 -0.11842003219611458 0.029333595826360862 0.3649013328353513 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant'] 5972 13150 APHPPLSVV True PC9_epitope_Rep3 915.51780208079 915.51670993586 55.612 2 -0.11849909293432775 0.02937123508799559 0.36516516049857434 ['ENSG00000183856|ENST00000361170|IQGAP3'] 33474 13689 GLATDVQTV True PC9_epitope_Rep2 902.47091145802 902.4703649679301 57.946 1 -0.11850518303883623 0.02937123508799559 0.3651854848605725 ['ENSG00000277791|ENST00000619426|PSMB3'] 73765 6595 NAEYSEKRFRM True PC9_epitope_Rep6 1429.67723290949 1429.6761299358602 34.074 2 -0.11850996730551704 0.02937123508799559 0.3652014514341414 ['MRAP2|p.S80Y|1|0.29|ENSG00000135324|chr6:84089102-84089102|C/A|missense_variant'] 64048 16114 LPANAILNQF True H1975_Epitope_Rep1 1099.6025943339098 1099.6014899358602 67.326 2 -0.11853833229787554 0.02938976377952756 0.36529611693163894 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4', 'ENST00000525045.5_1_1:40029448-40030891:-|nuORF'] 118773 4489 VAAAESHPL True NCI_RA007_Epitope_Rep4 893.46068112749 893.45958993586 23.651 2 -0.11856210587210007 0.02938976377952756 0.3653754626490819 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 97388 11651 SEDSAPGVWRE True H1975_Epitope_Rep2 1231.5469299325898 1231.5458299358602 49.885 2 -0.11858238217681717 0.029408869904135746 0.3654431386458997 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3'] 78371 12582 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 56.226 3 -0.11864344795394853 0.029447659540962953 0.3656469717782837 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 23330 13025 EVRAQYEEI True PC9_epitope_Rep2 1135.5509526838698 1135.54984993586 55.381 2 -0.11865818667377705 0.029466763773792887 0.36569617182629094 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'CON__Q9R0H5'] 21616 9645 ERRLSELAL True PC9_epitope_Rep2 1085.61930702721 1085.61820993586 42.44 2 -0.11868678765190793 0.029483545898283735 0.365791649784868 ['nc|ENSG00000135596|Q8TDZ2-3|MICAL1', 'nc|ENSG00000135596|Q8TDZ2-2|MICAL1', 'ENSG00000135596|ENST00000358807|MICAL1', 'nc|ENSG00000135596|Q8TDZ2-4|MICAL1'] 97855 12629 SELPIVTPA True H1975_Epitope_Rep2 925.51204799401 925.51149496793 53.676 1 -0.1187025693319178 0.029483545898283735 0.3658443354328271 ['ENSG00000182481|ENST00000330459|KPNA2'] 41435 17111 HYILHNSFF True PC9_epitope_Rep2 1176.5716285587998 1176.56998490379 71.067 3 -0.11870726074647464 0.029483545898283735 0.36585999755727566 ['ENSG00000163659|ENST00000295924|TIPARP'] 43914 13600 IIAPMMLVNL True PC9_epitope_Rep2 1113.62900940589 1113.62790993586 57.6 2 -0.11873820293596449 0.029483545898283735 0.3659633001939844 ['OR5D16|p.L100Ffs*14|1|0.43|ENSG00000205029|chr11:55839047-55839048|-/T|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16'] 80932 14131 PIDGIDAVL True NCI_RA007_Epitope_Rep5 911.49639792987 911.4958449679301 61.044 1 -0.11874875888098446 0.029483545898283735 0.3659985432207474 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 6963 16042 AQLDNYGQQEL True PC9_epitope_Rep5 1277.5887947445701 1277.58768993586 66.694 2 -0.11877584764050723 0.02949858312342569 0.36608898715286176 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 102916 8106 SPASSIAAA True PC9_epitope_Rep5 773.3919328613299 773.39082993586 36.118 2 -0.11878061699421098 0.02949858312342569 0.36610491150924573 ['ENST00000576370.5_1_17:53045786-53045891:-|nuORF'] 1438 14135 AEEFPNLAVA True H1975_Epitope_Rep3 1059.5236753068698 1059.52317496793 59.701 1 -0.11881501245622937 0.02949858312342569 0.3662197581472885 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 76369 7579 NPYYGGESA True PC9_epitope_Rep6 956.3875757568799 956.38646993586 38.426 2 -0.11881888440907463 0.02949858312342569 0.36623268704888945 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 126467 6791 VLLGETGK True PC9_epitope_Rep1 815.47526856247 815.47416993586 30.927 2 -0.11883399342928849 0.02949858312342569 0.3662831386581865 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 54629 9110 KYLEERAMRQF True PC9_epitope_Rep6 1469.74491854649 1469.74327490379 45.134 3 -0.11883473202389633 0.02949858312342569 0.36628560498612533 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 121543 7881 VFCFRYKIQAK True NCI_RA007_Epitope_Rep1 1401.75911205865 1401.75745490379 34.648 3 -0.11893350573328605 0.02949858312342569 0.3666154602739544 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'ENST00000557417.5_3_12:56748997-56753873:-|nuORF', 'ENST00000556140.5_1_12:56748997-56753873:-|nuORF'] 95779 13998 RYIDRIHIF True PC9_epitope_Rep6 1231.68257599011 1231.68094490379 65.701 3 -0.11893764727380061 0.02949858312342569 0.36662929219814083 ['ENSG00000174231|ENST00000304992|PRPF8'] 47553 18504 IVTNFLAGFEA True H1975_Epitope_Rep3 1180.61282466444 1180.61172993586 77.601 2 -0.11899503329229788 0.0295159386068477 0.3668209602754915 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43664250-43664349:-|nuORF'] 84399 16929 QAAQLLQV True PC9_epitope_Rep4 869.49706663621 869.49651496793 73.104 1 -0.119046721984259 0.0295159386068477 0.3669936155826016 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 82412 10113 PPNASLLI True H1975_Epitope_Rep1 823.48035394291 823.47924993586 43.836 2 -0.11905378701146407 0.0295159386068477 0.36701721602273807 ['nc|ENSG00000188175|A8MVW5-2|HEPACAM2', 'ENSG00000188175|ENST00000394468|HEPACAM2', 'nc|ENSG00000188175|A8MVW5-3|HEPACAM2', 'HEPACAM2|p.C315Afs*7|1|0.16|ENSG00000188175|chr7:93208649-93208649|A/-|frameshift_variant'] 28758 17825 FSSPPVILL True H1975_Epitope_Rep3 971.5691689473099 971.5686249679301 74.579 1 -0.11907374480971424 0.0295159386068477 0.3670838857897505 ['ENSG00000171867|ENST00000379440|PRNP'] 119640 18752 VATWVDETL True PC9_epitope_Rep6 1032.51277627 1032.51166993586 84.77 2 -0.11916027864036113 0.029529224292262596 0.3673729815616736 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 4514 8955 AKFGSNINL True NCI_RA007_Epitope_Rep3 962.5185303567799 962.51742993586 42.318 2 -0.11926555022067287 0.029529224292262596 0.36772473456308974 ['ENSG00000101132|ENST00000371419|PFDN4', 'ENST00000487129.1_1_20:52825073-52835686:+|nuORF'] 11715 13743 DHARLQLQL True PC9_epitope_Rep2 1092.60399131624 1092.60288993586 58.15 2 -0.11927574563976354 0.029529224292262596 0.3677588047285374 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 28784 5330 FSTPEQAAK True PC9_epitope_Rep1 977.4818104948898 977.48070993586 25.342 2 -0.11927753726850601 0.029529224292262596 0.36776479189843553 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 116841 5311 TVEPRRRKFHR True NCI_RA007_Epitope_Rep3 1480.8487468817598 1480.84711490379 27.901 3 -0.11930200397547298 0.029529224292262596 0.3678465552557942 ['nc|ENSG00000029534|P16157-14|ANK1', 'nc|ENSG00000029534|P16157-8|ANK1', 'nc|ENSG00000029534|P16157-12|ANK1', 'nc|ENSG00000029534|P16157-21|ANK1', 'nc|ENSG00000029534|P16157|ANK1', 'ENSG00000029534|ENST00000289734|ANK1', 'nc|ENSG00000029534|P16157-16|ANK1', 'nc|ENSG00000029534|P16157-5|ANK1', 'nc|ENSG00000029534|P16157-10|ANK1', 'ENST00000524227.5_1_8:41525962-41555361:-|nuORF', 'nc|ENSG00000029534|P16157-15|ANK1', 'nc|ENSG00000029534|P16157-13|ANK1', 'nc|ENSG00000029534|P16157-4|ANK1', 'nc|ENSG00000029534|P16157-7|ANK1', 'nc|ENSG00000029534|P16157-6|ANK1', 'nc|ENSG00000029534|P16157-9|ANK1', 'nc|ENSG00000029534|P16157-11|ANK1', 'nc|ENSG00000029534|P16157-2|ANK1'] 48107 20865 IYNLLPDII True PC9_epitope_Rep4 1072.61684741572 1072.61574993586 88.412 2 -0.11934012661499192 0.029529224292262596 0.36797396102487806 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000535804.1_1_12:6637788-6638275:+|nuORF'] 45759 10936 ISAHKPLLIS True NCI_RA007_Epitope_Rep1 1077.65462990677 1077.6535299358602 46.531 2 -0.11936221593906494 0.029529224292262596 0.36804778723703063 ['ENSG00000008853|ENST00000251822|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2'] 11695 11339 DGYDYDGYR True PC9_epitope_Rep3 1122.42541781758 1122.4243299358602 48.622 2 -0.119364377464238 0.029529224292262596 0.3680550115627506 ['ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 128627 9844 VPVDTGVAA True PC9_epitope_Rep2 827.4388830537498 827.43778993586 43.2 2 -0.11939469070309265 0.029529224292262596 0.36815632830485123 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 26274 14358 FHFTNRDCDSL True PC9_epitope_Rep1 1353.57718451505 1353.5755349037902 60.052 3 -0.1194181907813589 0.029529224292262596 0.36823487678836564 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF'] 91798 4797 RKHWIANNL True NCI_RA007_Epitope_Rep3 1150.63596015086 1150.63432490379 25.835 3 -0.11946335947810581 0.029529224292262596 0.3683858608297568 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000464173.5_1_20:30136866-30137929:+|nuORF', 'ENST00000483310.5_1_20:30136863-30150236:+|nuORF', 'ENST00000472128.5_1_20:30136905-30155443:+|nuORF', 'ENST00000492709.5_1_20:30132820-30157019:+|nuORF', 'ENST00000460389.5_1_20:30136650-30157019:+|nuORF'] 96664 20815 SAISMGIVSV True PC9_epitope_Rep2 962.5106680950199 962.50956993586 85.507 2 -0.1194799448932874 0.029545991029978756 0.36844130326137126 ['ENSG00000092148|ENST00000399332|HECTD1'] 134778 17502 VYTVVDEMF True NCI_RA007_Epitope_Rep2 1101.5052483614097 1101.50467496793 72.81 1 -0.11948755505012024 0.029545991029978756 0.3684667433316884 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 15129 6078 EAAAAVALG True H1975_Epitope_Rep1 771.41266830591 771.41156993586 28.446 2 -0.11949078015171578 0.029545991029978756 0.368477524654001 ['ENSG00000146216|ENST00000259750|TTBK1', 'TTBK1|p.A1019Pfs*75|1|0.11|ENSG00000146216|chr6:43283794-43283794|G/-|frameshift_variant'] 2082 6647 AELEKSLSP True H1975_Epitope_Rep2 972.5127762699999 972.51166993586 30.475 2 -0.11949123406781417 0.029545991029978756 0.36847904207310994 ['nc|ENSG00000167112|O95900-2|TRUB2', 'ENSG00000167112|ENST00000372890|TRUB2'] 37119 12670 GVPTKVFNV True PC9_epitope_Rep6 959.5440168286299 959.54290993586 60.203 2 -0.11949241419621982 0.029545991029978756 0.36848298718949307 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 17212 3302 EGVHGGLINKK True NCI_RA007_Epitope_Rep2 1150.64585612822 1150.64422490379 17.509 3 -0.11953886203127852 0.029564498996813408 0.3686382663882593 ['ENSG00000108518|ENST00000225655|PFN1'] 114897 15050 TQSELATAL True PC9_epitope_Rep2 932.4814761417199 932.48092496793 63.148 1 -0.119555292397082 0.029564498996813408 0.3686931974232141 ['ENSG00000138629|ENST00000395081|UBL7'] 68577 9583 LTGTYESAV True PC9_epitope_Rep5 939.45492704071 939.45382993586 41.822 2 -0.11963216645020239 0.029581259957122907 0.3689502275235444 ['CON__Streptavidin'] 141074 10129 YSPAQSQATIY True H1975_Epitope_Rep2 1227.57716743171 1227.57606993586 43.96 2 -0.1196473537993542 0.029581259957122907 0.36900101063671287 ['ENSG00000181555|ENST00000409792|SETD2'] 100965 13768 SLFNTGFLK True NCI_RA007_Epitope_Rep5 1025.5545815123298 1025.5534899358602 59.633 2 -0.11966824672143304 0.029581259957122907 0.369070873999568 ['ENSG00000121486|ENST00000367506|TRMT1L'] 94747 10134 RSHLLVLV True NCI_RA007_Epitope_Rep4 935.59163572739 935.59052993586 45.838 2 -0.11967033785109196 0.029581259957122907 0.36907786661287206 ['ENST00000272793.9_1_2:170734066-170735040:+|nuORF'] 59539 18300 LFSPATASSV True PC9_epitope_Rep3 978.5022115863001 978.50110993586 75.596 2 -0.11967422675819837 0.029581259957122907 0.36909087095134707 ['TAF3|p.R673S|1|0.25|ENSG00000165632|chr10:7965529-7965529|G/T|missense_variant'] 40071 7206 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 36.806 2 -0.11971662791761055 0.02959918184321284 0.36923266402450633 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 89117 13090 QVQELFHEA True PC9_epitope_Rep1 1099.52982331647 1099.5287299358602 55.219 2 -0.11972059691817472 0.02959918184321284 0.36924593720633436 ['ENSG00000221955|ENST00000469902|SLC12A8', 'ENST00000481760.2_1_3:124925611-124930193:-|nuORF'] 132231 17194 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.49037496793 71.157 1 -0.11973220224085422 0.02959918184321284 0.36928474837072994 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 39194 13201 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 55.641 2 -0.11981060569457957 0.02961826656439908 0.3695469689494458 ['ENSG00000132646|ENST00000379143|PCNA'] 74744 9244 NHANVVRLL True PC9_epitope_Rep4 1034.5985120129799 1034.59740993586 43.154 2 -0.11984937266651555 0.029636767684713565 0.36967663765314857 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 31446 13704 GEALDALRPW True NCI_RA007_Epitope_Rep1 1126.5771078620598 1126.5760099358602 57.319 2 -0.11985146774208079 0.029636767684713565 0.36968364554664784 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 21200 10784 ERDMSNVSL True PC9_epitope_Rep5 1049.48115887189 1049.48057496793 46.472 1 -0.11992688981680116 0.029674349091481162 0.369935943508791 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 77881 8658 NVHAVFQEA True PC9_epitope_Rep4 1013.4930438849299 1013.49194993586 40.794 2 -0.11993759426926459 0.029674349091481162 0.3699717539925669 ['ENSG00000173156|ENST00000308831|RHOD', 'RHOD|p.A187V|1|0.33|ENSG00000173156|chr11:67071529-67071529|C/T|missense_variant'] 5894 8239 APGKGILAA True PC9_epitope_Rep1 796.4806882960798 796.47958993586 36.525 2 -0.11994831520158258 0.029674349091481162 0.37000762023236855 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 72982 13854 MQLPTRQEI True PC9_epitope_Rep5 1114.58047899034 1114.57938993586 58.311 2 -0.12001435309835948 0.02969343008278764 0.3702285598386513 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B', 'ENST00000466199.1_1_7:2406190-2411546:+|nuORF'] 30045 16573 FYGPQVNNI True PC9_epitope_Rep6 1050.51344497634 1050.5123499358601 76.189 2 -0.12002210827410624 0.02970958925657209 0.37025450748357003 ['ENSG00000106299|ENST00000223023|WASL'] 72780 17997 MPAGSFITA True PC9_epitope_Rep2 893.43168949833 893.43058993586 74.529 2 -0.12003865831362345 0.02970958925657209 0.37030988250047353 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 48248 9286 IYQKAFEHL True PC9_epitope_Rep6 1147.6025943339098 1147.60093490379 45.879 3 -0.12004941793318216 0.02970958925657209 0.37034588406175994 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 104018 22178 SQDGSFYFL True PC9_epitope_Rep2 1062.46582607758 1062.4652749679299 90.794 1 -0.12006496250123638 0.02970958925657209 0.3703978971092528 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant'] 54751 14137 KYMPNVKVAVF True PC9_epitope_Rep6 1294.7107648838999 1294.7091149037901 66.248 3 -0.12011153603222019 0.02970958925657209 0.3705537427120638 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 97852 12286 SELPIVTPA True H1975_Epitope_Rep1 925.51204799401 925.51149496793 52.282 1 -0.12014081342727423 0.02970958925657209 0.37065171749839965 ['ENSG00000182481|ENST00000330459|KPNA2'] 128315 10274 VPPPPPPPP True PC9_epitope_Rep2 893.50108938749 893.49998993586 44.85 2 -0.12025796891732668 0.029728666928824223 0.37104381629071015 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1019Efs*12|1|0.21|ENSG00000139734|chr13:59810896-59810896|T/-|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000188316|ENST00000341276|ENO4'] 101731 16870 SLNIITVTL True PC9_epitope_Rep1 972.58554728744 972.58444993586 69.715 2 -0.12026721668567651 0.029747158979198617 0.37107477006826073 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132676-7132733:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 55218 5412 LADDRRYFCR True NCI_RA007_Epitope_Rep5 1313.6298887942498 1313.62825490379 27.505 3 -0.12027994248270257 0.029747158979198617 0.3711173661163692 ['SIGLEC15|p.A239Gfs*73|1|0.26|ENSG00000197046|chr18:45838934-45838935|-/A|frameshift_variant', 'ENSG00000197046|ENST00000389474|SIGLEC15'] 277 5798 AAGPPVEERFR True PC9_epitope_Rep1 1227.63601972051 1227.6343649037901 27.118 3 -0.1202951997960818 0.029765064386120123 0.37116843684536294 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 39969 10194 HPLLGVSA True PC9_epitope_Rep2 792.4493881678001 792.44828993586 44.547 2 -0.12029581594846317 0.029765064386120123 0.3711704993152011 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 54741 10010 KYMEDYHQF True PC9_epitope_Rep2 1259.52810906431 1259.5270099358602 43.831 2 -0.12030569480221857 0.029765064386120123 0.3712035674466317 ['ENSG00000118898|ENST00000345988|PPL'] 22190 12720 ESVFENFYIYY True H1975_Epitope_Rep2 1472.6499980188 1472.64890993586 54.028 2 -0.12045377096115185 0.029778869778869777 0.3716992944838124 ['ENST00000299638.7_2_15:58008553-58008757:+|nuORF'] 106205 12979 STDVSDLLHQY True H1975_Epitope_Rep2 1276.5935457718401 1276.59244993586 55.04 2 -0.12047822549369991 0.029778869778869777 0.37178117413609957 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 108216 19728 SYIALPLTL True NCI_RA007_Epitope_Rep1 989.57973363101 989.57862993586 80.924 2 -0.12049728779048492 0.029778869778869777 0.37184500147134564 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 142341 9385 YYEEQHPEL True PC9_epitope_Rep6 1206.5193182024198 1206.51822993586 46.297 2 -0.12056237848426887 0.029778869778869777 0.37206296260748595 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 100015 10502 SIQIEFQQE True H1975_Epitope_Rep3 1120.540053647 1120.53894993586 45.46 2 -0.12057583230266067 0.029778869778869777 0.37210801651192515 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1', 'nc|ENSG00000152969|Q96N16-3|JAKMIP1'] 78167 4910 NYARGHYTI True NCI_RA007_Epitope_Rep5 1093.5304920228102 1093.52938993586 25.579 2 -0.12059506215195723 0.029778869778869777 0.3721724147292215 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 30303 17653 GAAGTVFTTV True PC9_epitope_Rep5 922.47599683846 922.47488993586 72.915 2 -0.1206257607985928 0.029778869778869777 0.3722752244349628 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 132353 5736 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 27.453 2 -0.12063655930384992 0.029778869778869777 0.3723113897769871 ['ENSG00000160161|ENST00000291495|CILP2'] 140576 11137 YRQKQVVIL True PC9_epitope_Rep3 1145.6920780446499 1145.69044490379 47.838 3 -0.12063846022647066 0.029778869778869777 0.37231775623187563 ['ENSG00000143179|ENST00000367879|UCK2'] 65860 16776 LSDLNDELLLK True NCI_RA007_Epitope_Rep1 1271.69728256439 1271.69618993586 69.382 2 -0.12066780265289452 0.029778869778869777 0.3724160304977445 ['ENSG00000137628|ENST00000393743|DDX60'] 2074 13816 AELDSVFSSA True H1975_Epitope_Rep2 1024.47130538084 1024.4707749679299 58.29 1 -0.12069990196353274 0.029796768740909627 0.37252354331001175 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1', 'nc|ENSG00000173744|P52594-3|AGFG1', 'nc|ENSG00000173744|P52594-4|AGFG1'] 88614 7571 QTDTLQNDY True H1975_Epitope_Rep2 1096.4672826295598 1096.46618993586 34.074 2 -0.12070070723597479 0.029796768740909627 0.37252624054287126 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 61987 12007 LLDPKYGMFRY True H1975_Epitope_Rep3 1401.7114931598899 1401.70984490379 51.346 3 -0.120745765485391 0.029796768740909627 0.3726771669904148 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 108620 6282 SYPRRFSTL True NCI_RA007_Epitope_Rep3 1125.59309227937 1125.59198993586 31.715 2 -0.12078763620028785 0.02981173603741697 0.3728174259468078 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 5114 11255 ALLKQIQEA True PC9_epitope_Rep2 1012.5916952970399 1012.59058993586 48.618 2 -0.12080287756717753 0.02981173603741697 0.3728684838860445 ['ENST00000484795.5_1_12:6761826-6762560:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-8|ING4', 'ENST00000488381.5_1_12:6760363-6764813:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-3|ING4', 'nc|ENSG00000111653|Q9UNL4-4|ING4', 'nc|ENSG00000111653|Q9UNL4-7|ING4', 'nc|ENSG00000111653|Q9UNL4-5|ING4', 'nc|ENSG00000111653|Q9UNL4-6|ING4', 'ENSG00000111653|ENST00000341550|ING4', 'nc|ENSG00000111653|Q9UNL4|ING4'] 6487 6398 APSPATAAATA True PC9_epitope_Rep4 927.4661604307499 927.46506993586 31.701 2 -0.1208240302088428 0.02981173603741697 0.37293934633414216 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 65862 21296 LSDLNDELLLK True PC9_epitope_Rep2 1271.69728256439 1271.69618993586 87.378 2 -0.12085014773383473 0.02981173603741697 0.37302684458089524 ['ENSG00000137628|ENST00000393743|DDX60'] 142310 14616 YYDPKHVIF True PC9_epitope_Rep2 1180.59169529704 1180.5900449037902 61.489 3 -0.12085509865240363 0.02981173603741697 0.3730434314143214 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 48229 19668 IYQEVWNLF True NCI_RA007_Epitope_Rep3 1210.60225998074 1210.60116993586 85.774 2 -0.12085938927229785 0.02981173603741697 0.373057806181649 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 126978 16893 VLRRCMKIP True PC9_epitope_Rep1 1114.6467251586998 1114.6456299358601 69.804 2 -0.12089421925915002 0.02981173603741697 0.3731744998051322 ['CAMK2D|p.V28L|1|0.32|ENSG00000145349|chr4:113759398-113759398|C/A|missense_variant'] 69217 6123 LTSNNIDVKK True NCI_RA007_Epitope_Rep5 1130.6295373577398 1130.62844993586 30.232 2 -0.12091170703855178 0.02981173603741697 0.3732330928260661 ['ENSG00000189058|ENST00000343267|APOD'] 54912 8156 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 40.916 3 -0.12098026193919116 0.029870104348851376 0.3734628019716264 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 34890 18482 GQLSDLVVV True PC9_epitope_Rep2 928.52294703088 928.52239496793 76.425 1 -0.12102197506110343 0.029908819368023896 0.37360258323847534 ['ENST00000511288.1_1_17:48545715-48548505:+|nuORF', 'ENST00000506085.5_1_17:48545715-48551043:+|nuORF'] 134201 19025 VYLQEFELL True NCI_RA007_Epitope_Rep3 1152.60667665484 1152.60556993586 83.116 2 -0.12106340199097727 0.029927882253532198 0.3737414142394872 ['ENSG00000136051|ENST00000332180|WASHC4'] 1374 11969 AEEDPPWAP True H1975_Epitope_Rep1 1010.4345259492999 1010.43342993586 51.043 2 -0.12111817031897558 0.029942825706819654 0.3739249686523025 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 20651 16971 EQAAWYHTL True PC9_epitope_Rep3 1117.51925863277 1117.5181699358602 70.439 2 -0.1211451448030944 0.029942825706819654 0.37401537841106913 ['ENSG00000170915|ENST00000442253|PAQR8'] 30075 17348 FYIHEVQEL True PC9_epitope_Rep4 1176.5815245361598 1176.5804299358601 74.733 2 -0.1211828554744903 0.029942825706819654 0.3741417785620096 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF'] 12595 18851 DLADELALVD True H1975_Epitope_Rep1 1072.52882025696 1072.5277299358602 78.61 2 -0.12118430615106346 0.029942825706819654 0.37414664114157764 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENSG00000166796|ENST00000541669|LDHC', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF'] 39319 4738 HITHSREREYK True NCI_RA007_Epitope_Rep2 1454.7378590201 1454.7362249037901 23.06 3 -0.12123010058608132 0.029942825706819654 0.3743001467462079 ['ENSG00000180257|ENST00000444460|ZNF816'] 64775 6369 LQALQEKRINE True NCI_RA007_Epitope_Rep5 1340.7412130650398 1340.7395549037901 31.173 3 -0.12124478861686741 0.029942825706819654 0.3743493841112866 ['ENST00000282964.5_1_21:21112145-21112373:+|nuORF', 'ENST00000513458.8_2_5:64023996-64036906:-|nuORF', 'ENST00000495198.6_1_5:64023893-64064425:-|nuORF', 'ENSG00000153006|ENST00000513458|SREK1IP1'] 70140 14959 LVPPDQPEV True PC9_epitope_Rep1 992.51786165044 992.51676993586 62.362 2 -0.12126449972775788 0.029942825706819654 0.3744154615977837 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 119590 20673 VATLLLQL True PC9_epitope_Rep4 869.55860426361 869.55750993586 87.677 2 -0.12129944084551457 0.029942825706819654 0.37453259936694494 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8'] 112919 21582 TLLEQQGLI True PC9_epitope_Rep3 1013.57571087973 1013.5746099358599 88.311 2 -0.1213425112330751 0.02995894151621712 0.37467699837340945 ['ENSG00000100889|ENST00000216780|PCK2', 'ENST00000558674.5_1_14:24566116-24567637:+|nuORF', 'ENST00000561050.5_1_14:24566116-24568822:+|nuORF', 'nc|ENSG00000100889|Q16822-2|PCK2'] 125147 14847 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 62.34 1 -0.12134763077360788 0.02995894151621712 0.37469416290644497 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 48772 9018 KDLEALLNSK True NCI_RA007_Epitope_Rep2 1129.63428838501 1129.63264490379 39.678 3 -0.12135119881957031 0.02995894151621712 0.3747061257453135 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 8767 9532 AVDGNTVEL True NCI_RA007_Epitope_Rep4 916.45017601344 916.44962496793 43.516 1 -0.12137990183969784 0.02995894151621712 0.37480236268910505 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 64277 20812 LPIFLPRVA True PC9_epitope_Rep5 1024.64333694708 1024.64222993586 85.104 2 -0.12145653509909793 0.02995894151621712 0.37505932263731134 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 48003 20253 IYLDLPQNF True PC9_epitope_Rep6 1121.57571087973 1121.57460993586 90.587 2 -0.12146032613227632 0.02995894151621712 0.37507203515447957 ['RNF14|p.L342Vfs*10|1|0.21|ENSG00000013561|chr5:141980309-141980310|-/G|frameshift_variant', 'ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 17118 18586 EGLVQELQKKA True PC9_epitope_Rep3 1241.6979512707296 1241.6968499358602 76.716 2 -0.12157403696067498 0.029972109832266173 0.37545337603547024 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 137188 12927 YAYDGKDYLA True PC9_epitope_Rep2 1177.5291546101298 1177.52804993586 55.018 2 -0.1215999197856001 0.029972109832266173 0.3755401856270643 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 38921 8847 HHGGPLTL True PC9_epitope_Rep3 830.4398861132601 830.43878993586 38.982 2 -0.12160955518342827 0.029972109832266173 0.37557250306868495 ['ENST00000322310.9_1_9:140084508-140084799:+|nuORF'] 2408 16686 AEQFAVGEI True PC9_epitope_Rep3 962.4709114580198 962.46980993586 69.318 2 -0.12165480051914562 0.029972109832266173 0.3757242634962393 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 53406 17954 KQVEEIFNLKF True PC9_epitope_Rep6 1393.7605515272896 1393.7594499358602 81.689 2 -0.12165607069503279 0.029972109832266173 0.3757285240232488 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 93535 14250 RQLESLIRL True PC9_epitope_Rep6 1126.6822416369398 1126.68058490379 66.703 3 -0.12166821397524424 0.029972109832266173 0.37576925639684067 ['ENSG00000104738|ENST00000649973|MCM4', 'nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 23635 16926 EWSPYTKIFQF True NCI_RA007_Epitope_Rep3 1444.7027022979998 1444.70160993586 74.444 2 -0.12168096634317258 0.029972109832266173 0.375812032616988 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF'] 41502 15408 HYMPPPYASL True PC9_epitope_Rep4 1174.5481162328997 1174.5470099358602 67.198 2 -0.12170675041219764 0.029972109832266173 0.37589852446874117 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 89513 9769 QYLDRAEKL True PC9_epitope_Rep5 1134.6033226098998 1134.60166490379 42.548 3 -0.12171774524452829 0.029972109832266173 0.3759354072744954 ['ENSG00000132612|ENST00000254950|VPS4A'] 62275 13863 LLFPERSQR True NCI_RA007_Epitope_Rep3 1144.63529144452 1144.6341899358601 61.857 2 -0.12175315644181442 0.029972109832266173 0.37605420019637836 ['ENST00000451429.6_1_1:26603851-26603926:+|nuORF'] 8963 19319 AVGGALAGLV True PC9_epitope_Rep1 826.4912529797799 826.49070496793 79.115 1 -0.12179878623735152 0.029972109832266173 0.37620728213127325 ['ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENST00000472564.1_1_13:113976589-113976733:+|nuORF'] 82947 2768 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 14.733 3 -0.12184294861112027 0.029988805750309315 0.3763554506590768 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 114528 11163 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.47578496793 50.718 1 -0.12187606071670015 0.029988805750309315 0.37646655077226665 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 73022 15090 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 63.05 2 -0.1219062808244797 0.029988805750309315 0.376567952056116 ['PODXL|p.G363Efs*14|1|0.12|ENSG00000128567|chr7:131508964-131508964|C/-|frameshift_variant', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENSG00000128567|ENST00000378555|PODXL'] 64039 17834 LPALAGVSA True PC9_epitope_Rep2 797.46470387877 797.46360993586 73.898 2 -0.12192529453425341 0.029988805750309315 0.37663175337013294 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 46120 8848 ISISTSGG True PC9_epitope_Rep3 720.36538376032 720.36483496793 38.986 1 -0.12199846314096023 0.029988805750309315 0.37687728991963104 ['ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF'] 70118 10624 LVPEQIGK True PC9_epitope_Rep1 882.5174677276199 882.51636993586 45.758 2 -0.12219011812478876 0.03000431999371637 0.37752055964268205 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 23781 23818 EYGSIIAFF True PC9_epitope_Rep5 1045.51204799401 1045.51094993586 96.598 2 -0.12219928617458009 0.03000431999371637 0.3775513355925596 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 142376 13250 YYEKLHTYF True PC9_epitope_Rep4 1262.5971746003 1262.5960699358602 58.864 2 -0.12221660321882537 0.03000431999371637 0.3776094677365217 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 113525 13847 TLTLEQKL True PC9_epitope_Rep6 944.5542471591599 944.55314993586 65.076 2 -0.1222198238681725 0.03000431999371637 0.3776202793938166 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38'] 5845 13682 APFGGFKMS True PC9_epitope_Rep6 940.4476739156399 940.44656993586 64.412 2 -0.1222407720065142 0.03000431999371637 0.37769060307792857 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 54545 9571 KYINTDAKF True PC9_epitope_Rep3 1098.5709598524597 1098.5698699358602 41.766 2 -0.1222532400201614 0.03000431999371637 0.3777324596451509 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 141872 20786 YVDPVITSI True PC9_epitope_Rep1 1005.53826274185 1005.53767496793 84.783 1 -0.12225519119555006 0.03000431999371637 0.37773901003318283 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 85720 10227 QHAEVYYKL True PC9_epitope_Rep5 1149.58185888933 1149.58021490379 44.327 3 -0.12235786409049532 0.030061458108346914 0.3780837234725023 ['ENSG00000102390|ENST00000373358|PBDC1'] 17843 10614 EHTVETLVV True H1975_Epitope_Rep3 1025.53932537101 1025.53822993586 45.896 2 -0.12236988026607644 0.030061458108346914 0.3781240697356088 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17'] 141250 12832 YTDFPCQY True H1975_Epitope_Rep2 1035.40078329287 1035.3996899358601 54.467 2 -0.12238981722794141 0.030061458108346914 0.378191012809439 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 34283 12239 GPAAAFTAA True PC9_epitope_Rep1 775.38645355807 775.3859049679301 51.936 1 -0.12242533922591865 0.030078140338477246 0.37831029091403984 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 78201 15805 NYENKQYLF True PC9_epitope_Rep3 1217.57168812845 1217.5705899358602 65.948 2 -0.12250259148283331 0.030078140338477246 0.378569713817972 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 139978 4631 YQDPHSTAV True PC9_epitope_Rep2 1016.45632402304 1016.45522993586 23.183 2 -0.12256209142862427 0.030078140338477246 0.37876954098161886 ['ENSG00000146648|ENST00000275493|EGFR'] 37260 12257 GVRQQLAL True PC9_epitope_Rep6 883.5239500903898 883.52284993586 58.526 2 -0.12259634158418516 0.030078140338477246 0.3788845755491726 ['nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5'] 59232 7672 LFERLTLKHD True NCI_RA007_Epitope_Rep5 1270.70337100434 1270.70173490379 36.212 3 -0.1226097912707707 0.030078140338477246 0.37892974992043976 ['ENSG00000087086|ENST00000331825|FTL'] 29224 19097 FTVAELKQL True PC9_epitope_Rep2 1047.59644632431 1047.5953499358602 78.826 2 -0.12265102078892129 0.030095410106403864 0.37906823544473883 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 134199 14544 VYLPTHTSL True PC9_epitope_Rep5 1029.54949613189 1029.54838993586 60.943 2 -0.12265634701707716 0.030095410106403864 0.379086126239371 ['ENSG00000007944|ENST00000356840|MYLIP'] 48133 14326 IYPEVVHMF True NCI_RA007_Epitope_Rep4 1133.5579526406098 1133.55684993586 62.411 2 -0.12270900397683107 0.030095410106403864 0.37926300786399764 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 114234 17782 TPMPPISSV True PC9_epitope_Rep1 927.47355431031 927.47244993586 73.196 2 -0.12272718309874905 0.030095410106403864 0.3793240768425684 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 110977 4997 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 24.592 2 -0.12278463887029505 0.030133490380840205 0.3795170974003517 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 19083 22024 ELGELLLSL True PC9_epitope_Rep2 985.56956287013 985.56846993586 90.186 2 -0.12279333377218936 0.030133490380840205 0.3795463089046272 ['ENSG00000103528|ENST00000355377|SYT17'] 114851 11901 TQNEVAAAL True PC9_epitope_Rep4 915.4661604307498 915.46506993586 53.555 2 -0.1228373833557747 0.030151345621577057 0.37969430368931484 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 131445 21839 VTIPALLAA True PC9_epitope_Rep5 867.5429541994699 867.54184993586 89.038 2 -0.12287711513142789 0.030151345621577057 0.3798277992826137 ['ENST00000251473.9_1_19:11466164-11467636:+|nuORF'] 5083 12006 ALLFCYGLK True H1975_Epitope_Rep1 1026.5572243646197 1026.55612993586 51.19 2 -0.12288064610923904 0.030151345621577057 0.37983966342879055 ['ENST00000463001.5_1_1:157765953-157771747:-|nuORF', 'nc|ENSG00000163534|Q96LA6-2|FCRL1', 'ENSG00000163534|ENST00000368176|FCRL1'] 64144 4977 LPEVGAKG True H1975_Epitope_Rep1 769.4334037504899 769.43230993586 24.219 2 -0.12291884580010262 0.030170383165829144 0.3799680186157401 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 106854 14994 SVASTITGV True PC9_epitope_Rep2 833.44944773745 833.44834993586 62.931 2 -0.12294050971725483 0.030189419962704876 0.38004081467225614 ['ENSG00000147872|ENST00000276914|PLIN2'] 118967 7154 VAEAEATVLG True H1975_Epitope_Rep3 958.4971262058599 958.4965749679301 32.49 1 -0.122979770708875 0.03020549155070558 0.380172746531803 ['ENSG00000143375|ENST00000271636|CGN', 'CGN|p.K837Nfs*2|1|0.2|ENSG00000143375|chr1:151530686-151530687|GG/-|frameshift_variant', 'CGN|p.K837Mfs*4|1|0.2|ENSG00000143375|chr1:151530684-151530685|-/TGCC|frameshift_variant'] 55076 7565 KYVPAIAHL True NCI_RA007_Epitope_Rep3 1010.5913013742199 1010.59020993586 36.881 2 -0.12299428812581391 0.03020549155070558 0.3802215323093218 ['CPVL|p.L318Afs*6|1|0.28|ENSG00000106066|chr7:29066033-29066034|AA/-|frameshift_variant', 'CPVL|p.L381*|1|0.07|ENSG00000106066|chr7:29030756-29030756|G/-|frameshift_variant', 'CPVL|p.I382Sfs*14|1|0.07|ENSG00000106066|chr7:29030754-29030754|C/-|frameshift_variant', 'ENSG00000106066|ENST00000265394|CPVL'] 107830 17830 SVVDGTPLV True PC9_epitope_Rep4 885.48074786573 885.4801949679301 76.617 1 -0.12300195348364751 0.03020549155070558 0.3802472921208716 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 106506 9806 STLPAITLK True NCI_RA007_Epitope_Rep3 942.5749826037401 942.57388993586 45.635 2 -0.12301542073701775 0.03020549155070558 0.38029255011888563 ['ENSG00000117984|ENST00000236671|CTSD'] 124781 7679 VHDPAGALQAA True PC9_epitope_Rep6 1048.5301576696397 1048.5290699358602 38.863 2 -0.12302302726794567 0.03020549155070558 0.3803181129518321 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 112480 14122 TLDLGTVKI True PC9_epitope_Rep4 958.5698972233 958.56880993586 62.225 2 -0.12303461346693409 0.03020549155070558 0.3803570505199784 ['TECTA|p.D2032Ifs*79|1|0.16|ENSG00000109927|chr11:121187923-121187923|G/-|frameshift_variant', 'ENSG00000109927|ENST00000392793|TECTA', 'TECTA|p.K805Sfs*19|1|0.3|ENSG00000109927|chr11:121129679-121129679|G/-|frameshift_variant'] 30449 8183 GAFGKPSSL True PC9_epitope_Rep4 862.45486747106 862.45376993586 38.936 2 -0.12309539822204478 0.030220966285960986 0.38056133867499264 ['ENSG00000099812|ENST00000215582|MISP'] 30302 17758 GAAGTVFTTV True PC9_epitope_Rep1 922.47599683846 922.47488993586 73.103 2 -0.12313937537184506 0.030220966285960986 0.38070914922261945 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 33457 17507 GLAQPDSVSI True PC9_epitope_Rep4 985.50802524273 985.50692993586 75.345 2 -0.12314063492779417 0.030220966285960986 0.38071338281124006 ['ENSG00000108700|ENST00000394620|CCL8'] 116255 17270 TTDFIYQLY True H1975_Epitope_Rep3 1162.55464108198 1162.55354993586 72.074 2 -0.12314528776564791 0.030220966285960986 0.38072902187629787 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 84825 6977 QEAGSPPVV True H1975_Epitope_Rep2 882.4446967101799 882.44414496793 31.758 1 -0.12319079664099615 0.030220966285960986 0.3808819907873163 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 118390 18615 TYPAELNNI True PC9_epitope_Rep1 1033.50802524273 1033.5069299358602 76.39 2 -0.12319670914685817 0.030220966285960986 0.38090186514924024 ['ENSG00000106546|ENST00000242057|AHR'] 116393 19056 TTIGDITLS True PC9_epitope_Rep2 919.4862271689901 919.48512993586 78.664 2 -0.12320598715657234 0.030220966285960986 0.380933052660551 ['ENST00000462363.6_1_1:198608398-198672548:+|nuORF'] 16275 9248 EEFEKVMVA True NCI_RA007_Epitope_Rep3 1080.5161473982798 1080.5150499358601 43.481 2 -0.1232770586963135 0.030257839174286722 0.3811719681172745 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 17436 5561 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51822993586 26.781 2 -0.12329193899550225 0.030257839174286722 0.38122199279804464 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 28651 21768 FSLSWQLSL True PC9_epitope_Rep1 1079.56514619603 1079.56404993586 88.565 2 -0.12332040443327154 0.030257839174286722 0.3813176907547336 ['nc|ENSG00000150967|Q9NP78-3|ABCB9', 'ENST00000538895.5_1_12:123424612-123444782:-|nuORF', 'nc|ENSG00000150967|Q9NP78-6|ABCB9', 'nc|ENSG00000150967|Q9NP78-5|ABCB9', 'nc|ENSG00000150967|Q9NP78-7|ABCB9', 'nc|ENSG00000150967|Q9NP78-2|ABCB9', 'ENSG00000150967|ENST00000280560|ABCB9', 'ENST00000537276.5_1_12:123416657-123444319:-|nuORF'] 49621 6015 KGEYDVTVPK True NCI_RA007_Epitope_Rep1 1134.5920892198599 1134.59044490379 27.443 3 -0.12335770285733663 0.030257839174286722 0.38144308963270107 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 91010 6333 RFEEKHAYF True PC9_epitope_Rep6 1225.5880068989297 1225.58635490379 32.921 3 -0.1235177825792075 0.03035476022290244 0.3819813523260821 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 26261 10098 FHEPSQEL True PC9_epitope_Rep3 985.4505103666098 985.44940993586 43.796 2 -0.12351779064581811 0.03035476022290244 0.38198137945254984 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 114552 13821 TQASYVTLI True H1975_Epitope_Rep3 994.5335117145798 994.5329649679301 58.468 1 -0.1235962179842602 0.03039281089353687 0.3822451286442498 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7', 'nc|ENSG00000184313|Q68CQ1-4|MROH7', 'nc|ENSG00000184313|Q68CQ1-8|MROH7'] 118740 21753 TYVTILPEL True PC9_epitope_Rep4 1047.58521293427 1047.5841099358602 91.869 2 -0.1235995808549064 0.03039281089353687 0.38225643847742247 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 110387 8764 TEVLKTHGLLV True NCI_RA007_Epitope_Rep3 1208.71287305888 1208.71123490379 41.561 3 -0.12372953645860435 0.03043145564777209 0.38269353495065184 ['ENSG00000142541|ENST00000391857|RPL13A'] 103977 22075 SQAPFIVAL True PC9_epitope_Rep5 944.5331177917599 944.53256496793 89.94 1 -0.12373314454931145 0.030450478731753258 0.38270567151931206 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 138327 12427 YHDYGHLEL True PC9_epitope_Rep2 1145.51417325233 1145.51251490379 53.108 3 -0.12379836504667996 0.030467707761123754 0.3829250636846291 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 73767 20675 NAFFDEKEDT True PC9_epitope_Rep1 1214.5091474415399 1214.50804993586 84.35 2 -0.12380021529289587 0.030467707761123754 0.3829312878992638 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000561199.5_1_14:24652794-24657993:-|nuORF'] 27721 19359 FPQCGHTWFL True PC9_epitope_Rep6 1234.5593496229399 1234.5582499358602 87.112 2 -0.12380211781592909 0.030467707761123754 0.382937687987562 ['ENST00000497543.5_1_3:75471615-75471942:-|nuORF'] 48100 21240 IYNGETLVF True PC9_epitope_Rep5 1054.5335117145798 1054.53297496793 86.751 1 -0.12382485466331662 0.030467707761123754 0.38301417591508397 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 78618 18989 NYSPYVNYF True PC9_epitope_Rep6 1165.50802524273 1165.50747496793 85.684 1 -0.12386840393560836 0.03048613018401538 0.3831606838955841 ['ENSG00000156162|ENST00000414645|DPY19L4'] 31100 8190 GAVGKTCLL True H1975_Epitope_Rep2 860.47897404392 860.47786993586 36.454 2 -0.12387853474430137 0.03048613018401538 0.38319476697468463 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42', 'ENST00000518493.1_1_8:144077326-144077527:+|nuORF', 'ENST00000469532.1_1_22:37628528-37640188:-|nuORF', 'ENSG00000177105|ENST00000351018|RHOG', 'nc|ENSG00000126785|Q9H4E5-2|RHOJ', 'ENSG00000126785|ENST00000316754|RHOJ', 'ENSG00000119729|ENST00000238738|RHOQ', 'ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENSG00000128340|ENST00000249071|RAC2'] 111513 7909 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1005.4437110134398 1005.4431749679301 35.395 1 -0.12388607416432469 0.030502157708905454 0.3832201321200178 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 28135 16706 FRDAFTQEL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 69.508 2 -0.12389340228327059 0.030502157708905454 0.38324478660216493 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 127365 18908 VMVLARTEL True PC9_epitope_Rep4 1030.58450174162 1030.5834099358601 80.816 2 -0.1238980272579849 0.030502157708905454 0.3832603468288069 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'nc|ENSG00000142303|Q9H324-2|ADAMTS10'] 87507 4615 QQHDVQEL True PC9_epitope_Rep6 995.46722305991 995.46612993586 25.054 2 -0.12408543631056702 0.030502157708905454 0.3838909380579376 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 73764 6516 NAEYSEKRFRM True PC9_epitope_Rep6 1429.67723290949 1429.6761299358602 33.736 2 -0.12412366849906566 0.030502157708905454 0.3840195987284624 ['MRAP2|p.S80Y|1|0.29|ENSG00000135324|chr6:84089102-84089102|C/A|missense_variant'] 80561 7683 PGPPTTCPP True H1975_Epitope_Rep2 865.40038937005 865.39928993586 34.505 2 -0.12417095562837517 0.030502157708905454 0.3841787396586787 ['ENST00000417456.1_1_1:35442444-35442927:-|nuORF'] 11066 3596 DAVTYTEHAK True NCI_RA007_Epitope_Rep5 1133.53530261973 1133.53366490379 19.773 3 -0.12420452135711028 0.030539591628582077 0.38429170781021355 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 6595 14279 APVPGIPTA True PC9_epitope_Rep6 821.46470387877 821.46360993586 66.816 2 -0.12422221184008371 0.030539591628582077 0.3843512483688928 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 34287 11046 GPAAAFTAA True PC9_epitope_Rep4 775.38645355807 775.38534993586 50.264 2 -0.12422467325690009 0.030539591628582077 0.38435953281713575 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 99343 6031 SHSSSPTVL True PC9_epitope_Rep5 913.45051036661 913.44940993586 28.191 2 -0.12427521039767125 0.030558606621685233 0.38452963221115033 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 111462 11226 THTTPVLL True PC9_epitope_Rep2 880.5018176634799 880.50072993586 48.509 2 -0.12430729655115723 0.03057402286678041 0.3846376340170966 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 40108 10128 HPWETVTTAA True PC9_epitope_Rep6 1111.52982331647 1111.5287299358602 49.573 2 -0.12431760822026405 0.03057402286678041 0.3846723439048433 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 25435 8708 FEDVVNQSSPK True PC9_epitope_Rep1 1248.59863115228 1248.5975299358602 38.334 2 -0.12432331037025321 0.03057402286678041 0.384691537970714 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 2873 16854 AEVISLFSA True H1975_Epitope_Rep2 935.49639792987 935.49530993586 70.075 2 -0.12434321696041485 0.03057402286678041 0.3847585467604632 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 1855 11943 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.48512993586 50.943 2 -0.12437656567754611 0.03057402286678041 0.3848708074325075 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 17648 11007 EHIVPNAEL True PC9_epitope_Rep6 1020.52400966004 1020.52290993586 53.232 2 -0.1243841030656204 0.03057402286678041 0.3848961808992942 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 24607 16691 FAIPLIEKL True H1975_Epitope_Rep1 1042.64266824074 1042.6415699358602 69.599 2 -0.1244039416747042 0.03057402286678041 0.3849629656211414 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 92957 10876 RPHTVLTVI True PC9_epitope_Rep4 1034.6236641316598 1034.6225699358602 49.598 2 -0.12441699113936996 0.030591234434748506 0.3850068962033575 ['ENSG00000183751|ENST00000568546|TBL3'] 6027 16806 APLAAAALPA True PC9_epitope_Rep1 864.5069030439199 864.50580993586 69.468 2 -0.12445511498583489 0.030591234434748506 0.38513524268190596 ['ENST00000366600.7_1_1:235658098-235667703:-|nuORF'] 12445 12064 DIWKMENEFY True H1975_Epitope_Rep2 1373.5961886241298 1373.5950899358602 51.486 2 -0.12446316584513209 0.030591234434748506 0.38516234716785375 ['ENSG00000153936|ENST00000370550|HS2ST1'] 106807 18387 SVAGGFVGL True PC9_epitope_Rep6 805.4334037504899 805.4328549679301 83.37 1 -0.12449048113399723 0.030591234434748506 0.3852543102824876 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6'] 114541 16199 TQAPPNVVL True PC9_epitope_Rep3 937.5232813840499 937.52218993586 67.448 2 -0.12452572813706912 0.03060844330280986 0.3853729816216002 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 649 10011 AATATFAAA True PC9_epitope_Rep5 793.3970182417698 793.39592993586 43.484 2 -0.12455769915362266 0.03060844330280986 0.3854806273966589 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 99263 13299 SHQKETWIL True PC9_epitope_Rep1 1140.5927579262 1140.59110490379 56.018 3 -0.12455883621403178 0.03060844330280986 0.3854844559295891 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 11071 6041 DAWEDLRRYKS True NCI_RA007_Epitope_Rep5 1437.7000765290497 1437.69844490379 29.918 3 -0.12456461397233952 0.03060844330280986 0.38550390997618816 ['nc|ENSG00000118322|O94823-3|ATP10B'] 93304 7813 RPRVTEPISA True PC9_epitope_Rep1 1124.6302060640799 1124.62855490379 34.877 3 -0.12461575239224942 0.03062685045391267 0.38567610163916805 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 2843 5818 AEVEELRAT True H1975_Epitope_Rep3 1016.5138388991599 1016.51274993586 27.403 2 -0.12463763625395428 0.03062685045391267 0.3857497913741152 ['ENSG00000109063|ENST00000583535|MYH3'] 71788 5424 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 25.89 2 -0.1247185843688568 0.030645857025214697 0.3860223847534753 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 54034 14562 KVIDEIYRV True PC9_epitope_Rep3 1133.64445914589 1133.64280490379 61.141 3 -0.12473631672101924 0.03066486285120483 0.38608210193741793 ['ENSG00000143756|ENST00000366862|FBXO28'] 139516 15600 YLSPDLSKV True PC9_epitope_Rep1 1020.54916177872 1020.54806993586 64.825 2 -0.12497095264164923 0.03068086024034974 0.3868723969471097 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000445336.2_1_X:74804463-74804925:+|nuORF', 'ENST00000479537.5_1_7:140434399-140447180:-|nuORF'] 22111 3622 ESQKVELSESR True NCI_RA007_Epitope_Rep2 1290.6415585934199 1290.6399149037902 18.741 3 -0.12500888017143474 0.03068086024034974 0.3870001629743238 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 31639 7796 GEFKQPIP True NCI_RA007_Epitope_Rep4 914.4861675993398 914.48506993586 36.67 2 -0.12501506791242323 0.03068086024034974 0.3870210080540715 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 106029 12640 SSYGQQSSF True PC9_epitope_Rep4 989.4090394774499 989.40794993586 56.461 2 -0.1250329911347634 0.03068086024034974 0.3870813880820067 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1'] 68658 10292 LTISEQNIQRA True NCI_RA007_Epitope_Rep1 1271.68336383575 1271.6822699358602 44.036 2 -0.12506446704117993 0.03068086024034974 0.3871874274886854 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 72848 5948 MPNGTPHPTAA True PC9_epitope_Rep1 1092.50222866964 1092.50112993586 27.693 2 -0.12507240570325287 0.03068086024034974 0.3872141726842365 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 136136 6883 WRRADGKPIAR True H1975_Epitope_Rep1 1324.7476358581598 1324.74598490379 31.518 3 -0.12507342197982393 0.030693243958370083 0.3872175965167571 ['ENSG00000144619|ENST00000418658|CNTN4', 'CNTN4|p.R342Kfs*7|1|0.07|ENSG00000144619|chr3:2900766-2900767|-/CAAAAGTACACTT|frameshift_variant', 'CNTN4|p.G444Efs*5|1|0.82|ENSG00000144619|chr3:2925747-2925747|G/-|frameshift_variant', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 1857 12002 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.48512993586 51.248 2 -0.12510324261242442 0.030693243958370083 0.38731806383292255 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 99758 23591 SIIPPLFTV True PC9_epitope_Rep1 985.58481901145 985.58427496793 95.531 1 -0.12511997549462578 0.030693243958370083 0.38737443925166476 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 99683 5067 SIGTDNVCRDR True NCI_RA007_Epitope_Rep2 1234.57243348778 1234.5713299358601 24.336 2 -0.12513994304589338 0.030693243958370083 0.38744171407249867 ['nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENSG00000086200|ENST00000325324|IPO11'] 120392 4377 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 21.956 2 -0.12517805246379238 0.030693243958370083 0.3875701166712355 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 81402 12961 PLEDYSGECFR True PC9_epitope_Rep1 1314.55505208814 1314.5533949037901 54.727 3 -0.1251910303825238 0.030693243958370083 0.3876138445712404 ['ENSG00000150990|ENST00000308736|DHX37'] 63289 19024 LLSRRWVL True PC9_epitope_Rep2 1041.64473392941 1041.6436299358602 78.541 2 -0.12530995860917424 0.030693243958370083 0.38801459086178675 ['ENSG00000215148|ENST00000399677|PRSS41', 'nc|ENSG00000215148|Q7RTY9|PRSS41'] 71787 5321 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 25.52 2 -0.12532962100725248 0.030693243958370083 0.38808085117062774 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 72722 10689 MNFKTPRGPV True PC9_epitope_Rep5 1145.60154878809 1145.59990490379 46.106 3 -0.12537825172630157 0.030693243958370083 0.38824473780267116 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561157.5_1_15:83205554-83205662:-|nuORF', 'ENST00000558397.1_1_15:83205554-83206687:-|nuORF'] 92618 6839 RNAGDEVTI True PC9_epitope_Rep3 973.48287312405 973.48176993586 31.323 2 -0.12539946055428713 0.030693243958370083 0.38831621469919403 ['ENSG00000172554|ENST00000308624|SNTG2'] 25571 5411 FEKPDSVAA True H1975_Epitope_Rep2 962.4709114580198 962.46980993586 25.843 2 -0.12541882030956708 0.030693243958370083 0.38838146135403034 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 119821 7044 VDASPGPGL True H1975_Epitope_Rep2 811.4075829254699 811.40703496793 32.019 1 -0.12545079943957094 0.030693243958370083 0.38848924102658305 ['ENSG00000106780|ENST00000373930|MEGF9'] 105948 5551 SSSISSFKDPK True PC9_epitope_Rep5 1181.59281749585 1181.59117490379 26.357 3 -0.12546678999721478 0.03071103794292882 0.38854313557671655 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1'] 113986 7406 TPAKAIAAV True PC9_epitope_Rep3 840.5069030439199 840.50580993586 33.495 2 -0.12546718157528408 0.03071103794292882 0.3885444553622454 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 38641 19042 HFLDRHLVF True PC9_epitope_Rep1 1182.62981214126 1182.6281549037901 78.036 3 -0.1254684530446832 0.03071103794292882 0.38854874076155294 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 56321 23707 LDAYSTLIF True PC9_epitope_Rep5 1041.53826274185 1041.53767496793 96.169 1 -0.12561447150103383 0.030748427303192428 0.3890409239184078 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 90444 3767 REIQVQHPAA True H1975_Epitope_Rep2 1147.60980497267 1147.6087099358601 19.496 2 -0.12563656810657806 0.030748427303192428 0.3891154112983763 ['ENSG00000163468|ENST00000295688|CCT3', 'ENST00000368256.3_1_1:156302875-156308050:-|nuORF'] 8597 18602 ATWLALNV True PC9_epitope_Rep6 886.4912529797799 886.49070496793 84.196 1 -0.12568434838723855 0.030748427303192428 0.38927648386085695 ['ENST00000538588.2_1_7:99821243-99844125:-|nuORF', 'nc|ENSG00000291122|Q8NAP1|CASTOR3P', 'ENSG00000274070|ENST00000616305|CASTOR2'] 42793 11683 IENLRQQAHK True PC9_epitope_Rep1 1235.67346785839 1235.6723699358602 49.816 2 -0.12571859828456217 0.03076681886770268 0.38939194891171447 ['ENSG00000171951|ENST00000305409|SCG2'] 79950 5164 PESRNRIR True NCI_RA007_Epitope_Rep4 1026.56827451386 1026.5671699358602 26.388 2 -0.12574358837242955 0.03076681886770268 0.38947619937607136 ['ENSG00000160877|ENST00000292431|NACC1'] 35069 9241 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42883496793 40.492 1 -0.12574977051298988 0.03078581226729375 0.38949704190186857 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 125998 4012 VLDQQQTPSR True NCI_RA007_Epitope_Rep2 1170.59929985862 1170.59820993586 20.244 2 -0.12582668195420832 0.03082440085438263 0.38975635286887883 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 44290 17295 ILDDSHLLV True PC9_epitope_Rep6 1023.56006081559 1023.5589699358601 79.13 2 -0.125853448648783 0.0308421836422777 0.3898466029551599 ['ENSG00000021776|ENST00000156471|AQR'] 73009 15611 MRAFADAL True PC9_epitope_Rep5 893.4429228883698 893.44237496793 65.059 1 -0.12585608168542897 0.0308421836422777 0.38985548097821787 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 105132 15764 SRFGKYFEI True PC9_epitope_Rep4 1145.58694426977 1145.58529490379 68.559 3 -0.12587485078059904 0.0308421836422777 0.3899187669440889 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 87153 18606 QPFGDHIISV True PC9_epitope_Rep1 1111.56620882519 1111.5651099358602 76.355 2 -0.1259059229656497 0.030880163022180423 0.39002353932709327 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 57805 7241 LEERTPPVP True H1975_Epitope_Rep3 1036.5553097883198 1036.5542099358602 32.825 2 -0.12592393615798322 0.030880163022180423 0.39008427956269864 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 142627 13120 YYNKVSTVF True PC9_epitope_Rep4 1119.5600608155898 1119.5589699358602 58.36 2 -0.12609395702502849 0.03089551946398135 0.3906576415617802 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 5052 14935 ALLAPLRGA True PC9_epitope_Rep4 880.54943656224 880.54832993586 65.389 2 -0.12612189219302677 0.03089551946398135 0.3907518566984232 ['ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 103872 20981 SPYLLSPTF True PC9_epitope_Rep4 1023.52769805815 1023.5266099358599 88.864 2 -0.12612378424028603 0.03089551946398135 0.3907582379778844 ['ENST00000420027.3_1_20:48698513-48698663:-|nuORF'] 12431 9028 DIVMTQSPD True NCI_RA007_Epitope_Rep4 1004.44846176128 1004.44736993586 41.558 2 -0.12612686267658393 0.03089551946398135 0.39076862059931755 ['nc|ENSG00000211598|P06312|IGKV4-1'] 72849 6058 MPNGTPHPTAA True PC9_epitope_Rep1 1092.50222866964 1092.50112993586 28.116 2 -0.12614145062771687 0.03089551946398135 0.3908178217120908 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 87136 13527 QPAPVIPSA True PC9_epitope_Rep5 878.48616759934 878.48506993586 57.053 2 -0.12616744658647466 0.03089551946398135 0.39090550061929386 ['ENSG00000151694|ENST00000310823|ADAM17'] 131542 15389 VTLAGEEI True PC9_epitope_Rep2 830.43854870058 830.43744993586 64.476 2 -0.12621311562850912 0.03089551946398135 0.39105953811205735 ['ENST00000339303.5_16:18434460-18437593:-|nuORF'] 132430 10924 VVASRQYTV True PC9_epitope_Rep6 1021.5556441414901 1021.55454993586 52.888 2 -0.12626145892765103 0.03091450513282658 0.3912226031071997 ['nc|ENSG00000164694|Q4ZHG4-2|FNDC1', 'ENSG00000164694|ENST00000297267|FNDC1'] 124989 17474 VHVVDFFNR True PC9_epitope_Rep5 1131.58252759567 1131.5814299358601 72.216 2 -0.12628008233129231 0.03095126155774957 0.39128542306517994 ['ENSG00000172081|ENST00000357066|MOB3A', 'ENSG00000120162|ENST00000262244|MOB3B', 'ENSG00000142961|ENST00000319928|MOB3C'] 72272 7951 MHYNRKIIL True PC9_epitope_Rep4 1186.6644833978198 1186.66282490379 38.026 3 -0.12630007066742496 0.03095126155774957 0.3913528484369138 ['ENST00000557431.5_1_14:78177213-78182211:+|nuORF'] 96381 7311 RYVPRASYF True NCI_RA007_Epitope_Rep5 1157.5981776598098 1157.59654490379 34.798 3 -0.1263353594979427 0.03095126155774957 0.39147188916217723 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 72951 18851 MQDEPRYMML True PC9_epitope_Rep5 1312.5614004218799 1312.56030993586 77.527 2 -0.1263420822650854 0.03095126155774957 0.3914945677055864 ['ENSG00000103319|ENST00000263026|EEF2K'] 127677 10078 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.4914349679301 44.096 1 -0.12637946751778606 0.031007600094021783 0.39162068557076873 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 59700 4424 LGARRQQRSR True NCI_RA007_Epitope_Rep4 1226.70683367534 1226.70517490379 23.379 3 -0.1264447725256073 0.031007600094021783 0.39184100059316046 ['ENST00000564529.1_1_15:75165550-75165682:-|nuORF'] 101524 10559 SLLEQKEKEN True PC9_epitope_Rep2 1216.6299312805597 1216.62882993586 45.933 2 -0.12648954622072822 0.031007600094021783 0.39199205844544066 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'ERC1-VWF|2|fusion', 'ERC1-VWF|1|fusion', 'ENST00000539007.5_1_12:1192665-1225250:+|nuORF'] 42248 3201 IDSYRCFQPKQ True NCI_RA007_Epitope_Rep1 1383.6605202161898 1383.65887490379 16.345 3 -0.12650309934207962 0.031007600094021783 0.39203778533798345 ['ENSG00000169188|ENST00000374987|APEX2'] 71975 5275 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 25.372 2 -0.12654350703872264 0.03102658022055511 0.3921741203849157 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 16435 7014 EEKVLNLK True H1975_Epitope_Rep3 971.5651461960299 971.56404993586 31.944 2 -0.12656688231104363 0.03104434346599812 0.392252990617994 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B'] 85359 9361 QETSSIVSV True NCI_RA007_Epitope_Rep4 948.47639076128 948.47528993586 42.862 2 -0.12658925420265651 0.03104434346599812 0.3923284769747436 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant'] 113649 16826 TLVYHVVGV True PC9_epitope_Rep3 985.5596668927699 985.55856993586 69.872 2 -0.12661260693508425 0.03104434346599812 0.39240727453046864 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3', 'SF3B3-CDH15|1|fusion'] 139523 14180 YLSQDTVSV True PC9_epitope_Rep4 1010.49204082542 1010.49094993586 62.446 2 -0.1266719222870725 0.031060279660021152 0.3926074260409888 ['ENSG00000117984|ENST00000236671|CTSD'] 34510 4998 GPPQEPSP True H1975_Epitope_Rep2 807.3762827971899 807.37518993586 24.31 2 -0.12670096654599206 0.031060279660021152 0.39270543591945967 ['ENSG00000175764|ENST00000321582|TTLL11'] 47249 13230 IVCDVPSASA True PC9_epitope_Rep4 960.45863252216 960.4580849679301 58.786 1 -0.12671461835026776 0.031060279660021152 0.39275150485385163 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 115149 18221 TRDFANFVL True PC9_epitope_Rep6 1081.55564414149 1081.5545499358602 82.73 2 -0.12676960306839707 0.031060279660021152 0.3929370603527476 ['ENST00000474983.5_1_6:10529144-10530083:+|nuORF', 'ENSG00000111846|ENST00000495262|GCNT2'] 103457 8839 SPPVPGPSA True PC9_epitope_Rep1 807.41266830591 807.41156993586 38.841 2 -0.1267722377217672 0.031060279660021152 0.39294595168399576 ['ENSG00000143756|ENST00000366862|FBXO28'] 23777 23880 EYGSIIAFF True PC9_epitope_Rep1 1045.51204799401 1045.5114749679299 96.656 1 -0.12681142080931967 0.031060279660021152 0.3930781878531043 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 89547 15031 QYLRVETQF True PC9_epitope_Rep4 1182.6033226099 1182.6022299358601 65.75 2 -0.12686335443082247 0.0310780377949672 0.3932534621484202 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant'] 13946 11466 DRATLAAL True PC9_epitope_Rep2 829.4657665079299 829.46521496793 49.422 1 -0.12689316240465598 0.0310780377949672 0.3933540668235534 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 64366 20489 LPLLPAPGAAA True PC9_epitope_Rep3 989.5909670210498 989.58986993586 84.069 2 -0.12692743144523944 0.0310780377949672 0.39346973135519026 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 118036 10661 TYETKTALL True PC9_epitope_Rep4 1038.5597264624198 1038.5586299358602 48.756 2 -0.1269529934156128 0.03109457607205796 0.39355601018819064 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 45377 6374 IQDSRTLP True PC9_epitope_Rep2 928.4977949122 928.49668993586 29.921 2 -0.1269690410495692 0.03109457607205796 0.3936101764720044 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 135115 10176 WEEETVPTTA True H1975_Epitope_Rep2 1161.51898384925 1161.51847496793 44.144 1 -0.12697443059338603 0.03109457607205796 0.39362836821038555 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 114667 22131 TQFADMISL True PC9_epitope_Rep5 1024.4899326504399 1024.48937496793 90.161 1 -0.12698898097885802 0.03109457607205796 0.39367748167372724 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 100813 8137 SLEKDRERWRK True NCI_RA007_Epitope_Rep5 1501.8113583135298 1501.8097049037901 37.982 3 -0.12700001374973016 0.03109457607205796 0.3937147221833435 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA', 'MGA|p.H2273Rfs*60|1|0.26|ENSG00000174197|chr15:41750425-41750431|ACTTACT/-|frameshift_variant', 'MGA|p.A2391Qfs*13|1|0.36|ENSG00000174197|chr15:41757814-41757814|A/-|frameshift_variant', 'ENST00000566288.1_1_15:42040980-42042834:+|nuORF'] 6035 17490 APLAIPSAAAA True PC9_epitope_Rep1 951.5389314481899 951.53782993586 72.069 2 -0.12706182522518636 0.03112886174086691 0.3939233701640064 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 33562 5361 GLERLYEMILK True NCI_RA007_Epitope_Rep5 1363.75335797187 1363.75171490379 27.311 3 -0.12706965318203808 0.03112886174086691 0.3939497946710857 ['ENSG00000175906|ENST00000320033|ARL4D'] 142301 11929 YYDKHFTEF True PC9_epitope_Rep4 1248.54513902744 1248.5440499358601 53.669 2 -0.12708015738094383 0.03112886174086691 0.39398525354370206 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 134464 11003 VYPPPHQVF True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 53.217 2 -0.12710153574424893 0.03112886174086691 0.39405742119027737 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 96794 9792 SAQGSDVSLTA True PC9_epitope_Rep2 1034.48801807414 1034.4869299358602 43.003 2 -0.12710211303527855 0.03112886174086691 0.3940593699894932 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 66912 16129 LSNNKIQAL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 67.03 2 -0.12712012168969788 0.03112886174086691 0.39412016348266027 ['ENSG00000164342|ENST00000296795|TLR3'] 37320 17620 GVSDVDYSL True PC9_epitope_Rep2 953.43419159613 953.43364496793 73.054 1 -0.12713831101145648 0.03112886174086691 0.39418156784672626 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 3390 9287 AGHSDVVL True PC9_epitope_Rep5 796.4079172786401 796.40682993586 40.673 2 -0.1271447535371263 0.03112886174086691 0.3942033170612012 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'MTMR11|p.G424Efs*52|1|0.33|ENSG00000014914|chr1:149931279-149931279|C/-|frameshift_variant', 'MTMR11|p.V303E|1|0.24|ENSG00000014914|chr1:149933483-149933483|A/T|missense_variant', 'nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 52653 16002 KLSRFFDKV True PC9_epitope_Rep5 1138.6498788795 1138.6482449037899 66.542 3 -0.12724419413233304 0.031145390834524205 0.3945390323912019 ['ENSG00000144840|ENST00000273375|RABL3'] 19090 16093 ELGFHEGDVI True PC9_epitope_Rep3 1114.5294889632999 1114.52838993586 67.051 2 -0.1272644779290306 0.031145390834524205 0.3946075148346603 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 120470 13264 VEESALPSA True PC9_epitope_Rep5 901.4392769765699 901.43872496793 56.03 1 -0.12726578140149178 0.031145390834524205 0.394611915677935 ['ENSG00000122299|ENST00000355758|ZC3H7A'] 77994 20946 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.5594749679301 86.017 1 -0.12729468059336874 0.031145390834524205 0.3947094877182443 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 5071 23611 ALLDWVTSV True PC9_epitope_Rep1 1002.53859709502 1002.53750993586 95.61 2 -0.1272959391721121 0.031145390834524205 0.39471373709962176 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 36933 13459 GVLSDLTK True H1975_Epitope_Rep1 831.47018318203 831.46908993586 56.886 2 -0.12741230071717496 0.031183932346723044 0.39510663220552084 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 81955 13959 PLTGRRWKI True PC9_epitope_Rep3 1125.67709668685 1125.67546490379 58.769 3 -0.1275122178293955 0.031202897132230595 0.3954440335196957 ['nc|ENSG00000171495|Q7Z745-2|MROH2B', 'ENSG00000171495|ENST00000399564|MROH2B'] 39331 19064 HIYDTIVNV True PC9_epitope_Rep5 1072.55530978832 1072.5542099358602 78.359 2 -0.12754029671734504 0.03122186117527307 0.3955388557317321 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 46827 11005 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1118.5277749905702 1118.52727496793 47.419 1 -0.12760269418335668 0.031237767165113912 0.39574957946618733 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 97848 11883 SELPGAFEA True NCI_RA007_Epitope_Rep4 919.4287122928699 919.42760993586 52.705 2 -0.1276681772639573 0.031237767165113912 0.39597073535959765 ['ENSG00000126247|ENST00000246533|CAPNS1'] 24770 5979 FASIHPAS True H1975_Epitope_Rep2 828.41300265908 828.41190993586 27.977 2 -0.12766873420987992 0.031237767165113912 0.3959726163830485 ['ENSG00000154845|ENST00000400556|PPP4R1', 'nc|ENSG00000154845|Q8TF05-2|PPP4R1', 'ENST00000582594.5_1_18:9547789-9550464:-|nuORF', 'ENST00000285124.12_1_18:9547789-9562973:-|nuORF'] 133453 14778 VVYGGGAAEI True PC9_epitope_Rep5 934.4759968384599 934.47488993586 61.843 2 -0.1276767422227168 0.031237767165113912 0.3959996626582528 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 85698 11744 QGVVTTLENV True PC9_epitope_Rep5 1058.56078909158 1058.5596899358602 50.174 2 -0.12769991031297653 0.031237767165113912 0.3960779115990273 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'ENST00000492816.6_1_2:216226280-216244056:-|nuORF'] 52545 21375 KLFPGFEIETV True PC9_epitope_Rep3 1278.6859896047 1278.6848899358602 87.517 2 -0.1277092809665221 0.031237767165113912 0.39610956088177435 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 132501 16483 VVDLLAPYAK True PC9_epitope_Rep6 1087.62774645259 1087.62664993586 75.827 2 -0.12775597112850762 0.03125611617802482 0.396267259998419 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 17530 20705 EHGIVVFSL True PC9_epitope_Rep1 999.5389314481899 999.53837496793 84.468 1 -0.12775635032984323 0.03125611617802482 0.3962685408004875 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 101822 23158 SLPEVLPIL True PC9_epitope_Rep5 979.5953836951498 979.59428993586 94.066 2 -0.1277800984170645 0.03127446375450133 0.3963487538503063 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 26968 15148 FLEACPKVESF True PC9_epitope_Rep2 1268.61111041228 1268.6094749037902 63.525 3 -0.1277998904022334 0.03127446375450133 0.3964156056914431 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant', 'ENST00000479187.5_1_12:40692272-40758932:+|nuORF'] 35094 7889 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 35.329 2 -0.127924072282408 0.03135152060746017 0.3968350818283634 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 110817 14201 TGLYTSTSV True PC9_epitope_Rep5 927.45492704071 927.45382993586 59.632 2 -0.12793487746137108 0.03135152060746017 0.39687158278782075 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN', 'RELN|p.T1573Nfs*21|1|0.2|ENSG00000189056|chr7:103566630-103566631|-/T|frameshift_variant', 'RELN|p.N1689*|1|0.1|ENSG00000189056|chr7:103565423-103565424|-/TA|frameshift_variant', 'RELN|p.V1697Cfs*59|1|0.42|ENSG00000189056|chr7:103565399-103565400|-/A|frameshift_variant'] 19720 16744 ELRREFTV True PC9_epitope_Rep6 1048.56654317836 1048.5654499358602 76.895 2 -0.1279818523678006 0.031363725298376055 0.3970302722634226 ['ENSG00000197272|ENST00000356897|IL27'] 28140 17707 FRDAFTQEL True PC9_epitope_Rep5 1125.54547338061 1125.54436993586 73.127 2 -0.12802505682776985 0.031363725298376055 0.3971762296703093 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 28027 8918 FQPPIHQSL True NCI_RA007_Epitope_Rep3 1065.56072952193 1065.5596299358601 42.162 2 -0.12805144519266443 0.031363725298376055 0.397265379768492 ['nc|ENSG00000273749|Q7L576-2|CYFIP1', 'nc|ENSG00000273749|Q7L576-3|CYFIP1', 'ENSG00000055163|ENST00000620254|CYFIP2', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENSG00000273749|ENST00000617928|CYFIP1'] 65885 8359 LSDPAAGAY True H1975_Epitope_Rep1 863.40249754503 863.40194496793 37.084 1 -0.12805180314382114 0.031363725298376055 0.3972665890784541 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF'] 31583 12630 GEELSPPLP True H1975_Epitope_Rep3 937.4756624852898 937.47456993586 53.787 2 -0.12807528731338955 0.031363725298376055 0.3973459292405746 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 4759 15798 ALDNFLDKL True NCI_RA007_Epitope_Rep1 1047.56006081559 1047.5589699358602 65.546 2 -0.12808858955614552 0.031363725298376055 0.39739087088198416 ['ENSG00000167658|ENST00000309311|EEF2'] 47769 23942 IYEPNFIFF True PC9_epitope_Rep3 1188.5855472874398 1188.5849749679298 97.38 1 -0.1280954289049878 0.031363725298376055 0.3974139778091904 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 72769 10766 MNVAEVDKV True PC9_epitope_Rep3 1003.5008316873099 1003.49972993586 46.366 2 -0.12813272552318947 0.031363725298376055 0.3975399875972378 ['ENSG00000171858|ENST00000343986|RPS21'] 37075 21261 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49014993586 87.241 2 -0.1281343205401169 0.031363725298376055 0.3975453765777958 ['ENSG00000010292|ENST00000315579|NCAPD2'] 11707 7227 DHADVSNQL True PC9_epitope_Rep5 997.4464876153302 997.44538993586 32.763 2 -0.12818373874348984 0.031363725298376055 0.3977123459273518 ['ENSG00000147416|ENST00000276390|ATP6V1B2'] 94881 19617 RTATSLDLEWD True H1975_Epitope_Rep1 1305.62009487285 1305.61898993586 81.665 2 -0.12823021651613867 0.031363725298376055 0.3978693861789919 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.K1083Qfs*87|1|0.22|ENSG00000116147|chr1:175355505-175355506|-/G|frameshift_variant'] 111481 7456 THVGPTPAI True PC9_epitope_Rep6 891.48141657207 891.48030993586 37.916 2 -0.12830301589486226 0.031363725298376055 0.398115373618599 ['ENSG00000157259|ENST00000287957|GATAD1'] 77148 15725 NRPLIYLGL True PC9_epitope_Rep4 1057.62841515893 1057.62730993586 68.411 2 -0.12833200458619162 0.031380834996282816 0.3982133294877429 ['ENST00000485596.5_1_15:85634092-85681131:+|nuORF', 'nc|ENSG00000073417|O60658-6|PDE8A', 'nc|ENSG00000073417|O60658-2|PDE8A', 'ENSG00000073417|ENST00000394553|PDE8A'] 29092 19510 FTIRDLQRL True PC9_epitope_Rep1 1160.6665915728 1160.66494490379 79.863 3 -0.12834084695403727 0.031380834996282816 0.398243209210563 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 5530 10818 AMDVYKNLY True H1975_Epitope_Rep2 1115.53213181559 1115.53102993586 46.64 2 -0.12836560150329854 0.031380834996282816 0.3983268596912142 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 56547 23227 LDGLYLLTL True PC9_epitope_Rep5 1019.5902983147099 1019.58920993586 94.326 2 -0.12837262693848134 0.031380834996282816 0.39835060029588937 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 27005 21388 FLEQELETI True PC9_epitope_Rep2 1120.56520576568 1120.5641099358602 87.74 2 -0.12841630123124848 0.031416275430359936 0.39849818881513643 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 2596 6057 AERISISA True H1975_Epitope_Rep2 845.4606811274899 845.45958993586 28.275 2 -0.1284321567877624 0.031416275430359936 0.3985517706673238 ['ENST00000393640.8_1_16:70432915-70433221:-|nuORF'] 49402 5744 KEVDWSQNTA True H1975_Epitope_Rep2 1176.5411162761602 1176.54000993586 27.092 2 -0.12843939778047211 0.031416275430359936 0.39857624089615007 ['ENSG00000100522|ENST00000216410|GNPNAT1'] 280 5754 AAGPPVEERFR True PC9_epitope_Rep5 1227.63601972051 1227.6343649037901 27.127 3 -0.12850874639974363 0.031416275430359936 0.39881060436303706 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 3948 16168 AHDGSVFTL True PC9_epitope_Rep1 945.4555957470501 945.45448993586 67.004 2 -0.12851068167174234 0.031416275430359936 0.3988171447793812 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'EML4-ALK|7|fusion', 'EML4-ALK|6|fusion'] 1621 16429 AEFLKVFLP True NCI_RA007_Epitope_Rep5 1062.6113681124598 1062.61026993586 69.948 2 -0.12851860211145885 0.031416275430359936 0.39884391267496444 ['ENSG00000176171|ENST00000368636|BNIP3'] 38780 4577 HGVLGPER True NCI_RA007_Epitope_Rep4 863.46134983383 863.46024993586 24.01 2 -0.12878034886765857 0.03147249823957437 0.3997285967283466 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 108090 13542 SYAQYVHNL True PC9_epitope_Rep4 1093.51925863277 1093.5181699358602 59.985 2 -0.1287902106254101 0.03147249823957437 0.39976193191391746 ['ENST00000543374.1_1_11:73555872-73556061:+|nuORF', 'ENST00000544140.5_1_11:73555872-73571072:+|nuORF', 'nc|ENSG00000175581|Q96GC5-3|MRPL48', 'ENSG00000175581|ENST00000310614|MRPL48'] 85903 12601 QHFPEQMKL True PC9_epitope_Rep3 1156.5699143066397 1156.56826490379 53.493 3 -0.12884885884089675 0.03147249823957437 0.3999601821339871 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B'] 108902 14711 TAAPTVCLL True H1975_Epitope_Rep2 887.4786396907499 887.47809496793 61.747 1 -0.12887808553807178 0.03147249823957437 0.4000589809627744 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 75152 8593 NHYQKQLEI True PC9_epitope_Rep3 1171.5985715826298 1171.59746993586 38.004 2 -0.12894872620428047 0.03148713134631933 0.40029778501797314 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 79616 14031 PDLQLNKQLIQ True H1975_Epitope_Rep1 1308.74015043588 1308.73904993586 59.134 2 -0.12896183068469005 0.03148713134631933 0.40034208658605186 ['HAO2|p.P192Lfs*5|1|0.1|ENSG00000116882|chr1:119386634-119386634|C/-|frameshift_variant', 'ENSG00000116882|ENST00000325945|HAO2', 'nc|ENSG00000116882|Q9NYQ3-2|HAO2'] 62366 19877 LLGPPPVGV True PC9_epitope_Rep1 847.51673945163 847.51619496793 81.275 1 -0.12896756110733412 0.03148713134631933 0.40036145922205074 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 46703 15768 ITDVIIGFQ True H1975_Epitope_Rep3 1004.5542471591598 1004.55314993586 66.1 2 -0.1289744528506804 0.03148713134631933 0.4003847579931388 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 29855 12365 FVTEGSHFVEA True PC9_epitope_Rep4 1221.56660274801 1221.56550993586 55.368 2 -0.1290583510605388 0.03148713134631933 0.4006683995658214 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 120509 11650 VEFECLALGDP True H1975_Epitope_Rep2 1191.5481758025498 1191.54706993586 49.881 2 -0.1290949487806783 0.03148713134631933 0.40079213346950165 ['ENSG00000142798|ENST00000374695|HSPG2'] 141941 22571 YVGEELIYL True PC9_epitope_Rep3 1097.5644774896898 1097.5633899358602 92.088 2 -0.12910377528020117 0.03148713134631933 0.40082197559365607 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 14495 14051 DTIDIVRDAV True H1975_Epitope_Rep1 1115.58225281215 1115.5811499358601 59.211 2 -0.12910671403161517 0.03148713134631933 0.4008319114607449 ['nc|ENSG00000110697|O00562-2|PITPNM1', 'ENSG00000110697|ENST00000356404|PITPNM1'] 2995 15756 AFIEKHWTF True PC9_epitope_Rep4 1177.59202965021 1177.5903749037902 68.529 3 -0.12921431393398897 0.03154333541927409 0.40119571807226073 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 48713 7266 KCVSSRIKQF True NCI_RA007_Epitope_Rep4 1194.65431263694 1194.65266490379 34.584 3 -0.12922214939941432 0.03154333541927409 0.4012222116059192 ['ENSG00000268964|ENST00000601417|ERVV-2'] 141883 14805 YVDPVNKVL True PC9_epitope_Rep2 1045.58079626017 1045.5796899358602 62.212 2 -0.12931195471495333 0.03154333541927409 0.4015258738715187 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 84445 12389 QAFQDSAAL True PC9_epitope_Rep1 949.4505103666098 949.44940993586 52.514 2 -0.12943153198825808 0.03154333541927409 0.4019302322448472 ['ENSG00000204740|ENST00000454679|MALRD1'] 68111 15151 LTDPDIHVL True PC9_epitope_Rep6 1021.5444107514501 1021.54330993586 70.353 2 -0.12951257014767403 0.03158182920390324 0.4022042853274386 ['ENSG00000091157|ENST00000254442|WDR7', 'nc|ENSG00000091157|Q9Y4E6-2|WDR7'] 28966 18101 FTDVNKIYL True PC9_epitope_Rep3 1111.5913609438699 1111.59026993586 74.821 2 -0.12958053764759656 0.031598912809683036 0.402434146897252 ['ENSG00000101337|ENST00000398022|TM9SF4'] 27170 20192 FLLFPDMEA True NCI_RA007_Epitope_Rep4 1081.5154191222898 1081.5143299358601 87.369 2 -0.12963040421503833 0.031598912809683036 0.4026027983599425 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 68697 14675 LTKLYDYNL True PC9_epitope_Rep2 1141.6019256275702 1141.60082993586 61.712 2 -0.12963913263107246 0.031598912809683036 0.402632318862624 ['ENSG00000108018|ENST00000263054|SORCS1', 'SORCS1|p.V427Sfs*40|1|0.14|ENSG00000108018|chr10:106699348-106699348|C/-|frameshift_variant', 'nc|ENSG00000108018|Q8WY21-4|SORCS1', 'nc|ENSG00000108018|Q8WY21-3|SORCS1', 'nc|ENSG00000108018|Q8WY21-2|SORCS1', 'SORCS1|p.G200W|1|0.44|ENSG00000108018|chr10:106956541-106956541|C/A|missense_variant'] 72782 18382 MPAGSFITA True PC9_epitope_Rep5 893.43168949833 893.4311449679301 75.725 1 -0.1296419037638369 0.031598912809683036 0.40264169118336535 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 121276 15474 VETLAWPSP True PC9_epitope_Rep1 998.5072969667399 998.50618993586 64.342 2 -0.1297799286279145 0.031631835154737935 0.4031085282214847 ['SLC12A5|p.G477E|1|0.2|ENSG00000124140|chr20:46043900-46043900|G/A|missense_variant'] 69882 18561 LVIFQVTGI True PC9_epitope_Rep5 988.5957180483199 988.59462993586 76.42 2 -0.12978804554963352 0.031631835154737935 0.4031359830031427 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 17692 19470 EHLTTFVL True PC9_epitope_Rep3 958.5123823471799 958.51128993586 80.12 2 -0.1298210865904257 0.031631835154737935 0.4032477427846679 ['ENSG00000151491|ENST00000281172|EPS8', 'EPS8|p.K307*|1|0.12|ENSG00000151491|chr12:15660633-15660634|-/C|frameshift_variant'] 102373 13368 SLTEKYFSV True PC9_epitope_Rep2 1072.54407639828 1072.5429699358601 56.697 2 -0.12988061462212047 0.031631835154737935 0.4034490989502974 ['ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 92357 15969 RLPDIPLRQV True PC9_epitope_Rep5 1205.72444080209 1205.7233499358601 66.414 2 -0.12988558203758716 0.031631835154737935 0.4034659017600131 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 72322 18326 MILDEVHTI True PC9_epitope_Rep4 1069.54778187973 1069.54668993586 78.559 2 -0.12988821437487694 0.031631835154737935 0.40347480593937796 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 471 17855 [Acetylation]-AALTTLFK True H1975_Epitope_Rep1 905.52221907119 905.52167496793 74.352 1 -0.1299014928247573 0.031631835154737935 0.40351972200491315 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 15838 9812 EDENGDDQGF True PC9_epitope_Rep1 1124.3894262316796 1124.3883299358602 42.604 2 -0.12991108695605125 0.031631835154737935 0.40355217559931994 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'HNRNPU|p.Q207Sfs*132|1|0.2|ENSG00000153187|chr1:244863689-244863689|G/-|frameshift_variant'] 1268 7581 AEDLLAPGAPC True NCI_RA007_Epitope_Rep2 1055.49574630687 1055.49464993586 34.115 2 -0.1299875906594458 0.031631835154737935 0.4038109671770162 ['ENSG00000152518|ENST00000282388|ZFP36L2'] 45231 10513 IPTENSMTA True PC9_epitope_Rep3 962.43789707758 962.43678993586 45.377 2 -0.13010065233282547 0.031631835154737935 0.40419344471501295 ['ENSG00000046604|ENST00000261590|DSG2'] 126669 12056 VLNWQDCEVP True PC9_epitope_Rep1 1201.54375912845 1201.5426699358602 51.232 2 -0.13012446632140173 0.03164767285024532 0.4042740083213027 ['nc|ENSG00000157368|Q6ZMJ4-2|IL34', 'ENSG00000157368|ENST00000288098|IL34'] 72851 5965 MPNGTPHPTAA True PC9_epitope_Rep5 1092.50222866964 1092.50112993586 27.94 2 -0.1301365501174915 0.03164767285024532 0.40431488864762916 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 96155 9902 RYPDRITLI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65405490379 44.732 3 -0.1301428708063866 0.03164767285024532 0.4043362720855999 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 66911 16197 LSNNKIQAL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 67.118 2 -0.13017268217923353 0.03164767285024532 0.40443712751869704 ['ENSG00000164342|ENST00000296795|TLR3'] 24276 14534 EYTEKMVSI True PC9_epitope_Rep3 1098.52671208198 1098.52560993586 61.025 2 -0.13019450496292534 0.03164767285024532 0.40451095761822714 ['ENSG00000126749|ENST00000599672|EMG1'] 18137 13675 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59727496793 57.626 1 -0.13020579700075222 0.03164767285024532 0.4045491607924241 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 75619 7570 NLDSQRLQY True H1975_Epitope_Rep2 1135.56218607391 1135.56108993586 34.07 2 -0.13026019242815717 0.031664744629698406 0.4047331943578632 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-7|UEVLD'] 14282 18056 DSTLIMQLLR True NCI_RA007_Epitope_Rep1 1188.6536439305999 1188.6525499358602 74.372 2 -0.1302602656392692 0.031664744629698406 0.404733442053214 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 31919 12307 GEMEPPALP True H1975_Epitope_Rep3 939.4371688015898 939.43606993586 52.519 2 -0.13035206478169176 0.031664744629698406 0.40504403373417763 ['ENSG00000100726|ENST00000262319|TELO2'] 8748 8845 AVDATVNQV True PC9_epitope_Rep4 915.4661604307499 915.46506993586 41.554 2 -0.13042023199116676 0.031664744629698406 0.405274678969815 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 85990 12905 QHLLDTNQL True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 54.936 2 -0.13044437554585903 0.03168305220569552 0.4053563711126641 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 15245 5766 EAEMNHLSP True H1975_Epitope_Rep3 1026.44404508718 1026.44294993586 27.206 2 -0.13046343839714672 0.03168305220569552 0.4054208728809734 ['AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|6|3|sense'] 37259 14708 GVRQQLAL True PC9_epitope_Rep3 883.5239500903898 883.52284993586 61.715 2 -0.13049053284706252 0.031701977953248375 0.4055125517136582 ['nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5'] 131521 19651 VTKNQNIIL True PC9_epitope_Rep5 1041.61824439805 1041.6171499358602 80.644 2 -0.13050528558815458 0.031719663064084275 0.40556247072153223 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19', 'MAP3K19|p.D49Afs*36|1|0.13|ENSG00000176601|chr2:135005524-135005524|T/-|frameshift_variant', 'nc|ENSG00000176601|Q56UN5-7|MAP3K19', 'nc|ENSG00000176601|Q56UN5-4|MAP3K19', 'nc|ENSG00000176601|Q56UN5-5|MAP3K19'] 29330 16401 FVDEPLIHATT True PC9_epitope_Rep5 1241.6292030045697 1241.62810993586 68.085 2 -0.13050639968916516 0.031719663064084275 0.40556624053175827 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 104816 17084 SRADQFEYVM True PC9_epitope_Rep1 1244.54957278488 1244.54846993586 70.539 2 -0.13056356073104944 0.031719663064084275 0.40575966047174583 ['nc|ENSG00000163882|P52434-3|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H'] 103455 8646 SPPVPGPSA True PC9_epitope_Rep1 807.41266830591 807.41156993586 38.095 2 -0.13058245218110534 0.031738586616635395 0.40582358601460355 ['ENSG00000143756|ENST00000366862|FBXO28'] 23901 11434 EYKNTNEMF True PC9_epitope_Rep3 1174.49647458286 1174.49536993586 48.979 2 -0.13059641411330508 0.03175688880203244 0.40587083125830586 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 38301 7368 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.55982490379 33.281 3 -0.13059960406353086 0.03175688880203244 0.4058816256522812 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 73658 24676 MYIIPVVLF True PC9_epitope_Rep1 1093.6245756484498 1093.6234699358602 99.801 2 -0.1306278056081804 0.03177518955678887 0.40597705688122576 ['ENSG00000161671|ENST00000334976|EMC10'] 77566 3424 NTDPHSQEY True H1975_Epitope_Rep1 1089.43631685445 1089.43520993586 17.364 2 -0.13065143755326697 0.03177518955678887 0.40605702602570387 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 28766 14007 FSSSKLESISL True PC9_epitope_Rep6 1196.6288686514 1196.6272349037902 65.733 3 -0.13067510249827166 0.03179348888107242 0.4061371077359414 ['ENST00000557373.1_1_14:35344887-35344989:+|nuORF'] 126193 14117 VLGAFSDG True PC9_epitope_Rep2 764.37046914076 764.36992496793 59.573 1 -0.13069574871705844 0.03179348888107242 0.40620697486369417 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 71790 5449 MEGKVPVAA True H1975_Epitope_Rep3 900.4738886634798 900.47278993586 26.018 2 -0.1307657931306715 0.0318117867750508 0.40644401125904844 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 49040 2847 KEGKPPISV True H1975_Epitope_Rep1 953.5545815123298 953.55348993586 14.579 2 -0.1307694414067579 0.0318117867750508 0.4064563575529519 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 107162 21839 SVIEQLFFV True PC9_epitope_Rep6 1080.58554728744 1080.5844499358602 96.906 2 -0.130780773038061 0.03182946130248735 0.4064947055636197 ['ENST00000506162.1_1_5:92927828-92929545:+|nuORF', 'nc|ENSG00000185551|P24468-3|NR2F2', 'nc|ENSG00000185551|P24468-2|NR2F2', 'ENSG00000185551|ENST00000394166|NR2F2', 'ENSG00000175745|ENST00000327111|NR2F1'] 38570 4400 HEVIVSAA True NCI_RA007_Epitope_Rep3 824.43921740692 824.43812993586 24.083 2 -0.130830830894688 0.03182946130248735 0.4066641115376888 ['ENSG00000179051|ENST00000375436|RCC2'] 71230 19215 LYPFQIHSI True PC9_epitope_Rep4 1116.59678067748 1116.59568993586 82.011 2 -0.13083888807061167 0.03182946130248735 0.4066913790190358 ['ENSG00000163624|ENST00000295887|CDS1'] 121240 14406 VETDQRKM True NCI_RA007_Epitope_Rep1 1005.4913296327699 1005.49022993586 60.078 2 -0.1308926755257289 0.031848378272762795 0.4068734116244175 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 64098 19923 LPDIKVLTL True PC9_epitope_Rep1 1010.6375828603 1010.63648993586 81.452 2 -0.13092919510735573 0.031864804141838426 0.4069970071294999 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 118104 21527 TYGPSFPAF True PC9_epitope_Rep3 985.4545331178899 985.4539849679301 88.098 1 -0.13097020088158487 0.031864804141838426 0.40713578789233273 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 64263 9471 LPHGFTNM[Oxidation]A True PC9_epitope_Rep5 1002.4593016089401 1002.4582099358599 41.387 2 -0.13097553501859802 0.031864804141838426 0.4071538410340673 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 12437 5993 DIVSGPRSQDP True NCI_RA007_Epitope_Rep1 1169.56766537717 1169.5665699358601 27.355 2 -0.130981078715661 0.031864804141838426 0.407172603466269 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'TP53BP2|p.N110Ifs*8|1|0.06|ENSG00000143514|chr1:223810474-223810475|-/A|frameshift_variant'] 76273 12236 NPLALISR True H1975_Epitope_Rep3 882.52870111766 882.52815496793 52.241 1 -0.13100059478781306 0.031864804141838426 0.4072386552280163 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD', 'ENST00000482824.1_1_3:15676934-15683645:+|nuORF'] 33428 8135 GLAEVAAAV True NCI_RA007_Epitope_Rep5 799.4439684341899 799.44286993586 37.974 2 -0.13105407855511453 0.03188371820419646 0.40741967281000663 ['ENSG00000170684|ENST00000303809|ZNF296'] 113123 22295 TLPDLVPQL True PC9_epitope_Rep1 994.5698972232999 994.56880993586 90.569 2 -0.13109268418524025 0.03189826932843692 0.40755033738817553 ['ENSG00000163811|ENST00000407426|WDR43'] 140570 12089 YRQGEVRFL True PC9_epitope_Rep6 1166.6196413803798 1166.61799490379 57.827 3 -0.1311608292290602 0.03189826932843692 0.40778098616020625 ['CHIT1|p.A39V|1|0.13|ENSG00000133063|chr1:203225810-203225810|G/A|missense_variant'] 5788 7777 APDGYIVK True PC9_epitope_Rep5 861.45961849833 861.45852993586 34.858 2 -0.13118700454883708 0.03189826932843692 0.40786958280515623 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 5694 8444 APAKSLVGQVA True PC9_epitope_Rep2 1039.6025943339098 1039.6014899358602 37.848 2 -0.13119668384817262 0.03189826932843692 0.4079023449527783 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 26257 8792 FHEGEAVSV True PC9_epitope_Rep2 973.4505103666098 973.44940993586 39.172 2 -0.13120262353327766 0.03189826932843692 0.40792244945084577 ['ENSG00000156521|ENST00000287078|TYSND1'] 5697 9420 APAKSLVGQVA True PC9_epitope_Rep5 1039.6025943339098 1039.6014899358602 41.189 2 -0.13120926103415403 0.03189826932843692 0.4079449159553394 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 56317 20591 LDAYSTLIF True H1975_Epitope_Rep1 1041.53826274185 1041.53767496793 85.621 1 -0.13122097391395565 0.03189826932843692 0.40798456166585884 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 46353 6391 ISRERAVELL True NCI_RA007_Epitope_Rep3 1184.6877209401998 1184.68606490379 32.143 3 -0.1312692386226233 0.03189826932843692 0.4081479298239615 ['ENSG00000126067|ENST00000373237|PSMB2'] 4314 19884 AIIPVSGITVV True PC9_epitope_Rep6 1067.65904658087 1067.6579499358602 89.14 2 -0.13129847420608587 0.03191156940863995 0.4082468890182823 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 2881 3089 AEVKGSVSA True H1975_Epitope_Rep3 846.4446967101799 846.44358993586 16.38 2 -0.1313199850962652 0.03191156940863995 0.4083197017096664 ['ENST00000443199.6_1_17:73623504-73629591:-|nuORF', 'nc|ENSG00000108469|O94762-4|RECQL5', 'ENSG00000108469|ENST00000317905|RECQL5', 'ENST00000578865.5_1_17:73623504-73624919:-|nuORF'] 4600 12748 AKRNRKTNGSI True PC9_epitope_Rep5 1243.71091599627 1243.70926490379 54.042 3 -0.13133044721843035 0.03191156940863995 0.40835511540033176 ['nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'nc|ENSG00000183629|P0DX52-2|GOLGA8F', 'nc|ENSG00000183629|P0DX53-5|GOLGA8G', 'nc|ENSG00000183629|P0DX53-4|GOLGA8G', 'ENSG00000261739|ENST00000562295|GOLGA8S'] 111778 12019 TIKKGDLLL True NCI_RA007_Epitope_Rep4 999.6328318330299 999.63172993586 53.235 2 -0.13133839154585011 0.03191156940863995 0.4083820065943366 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6'] 70903 20585 LYEQAFQLL True PC9_epitope_Rep6 1123.5913609438699 1123.59026993586 91.91 2 -0.1313631120863503 0.03191156940863995 0.4084656850483673 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 21100 8406 ERAAQLAI True PC9_epitope_Rep5 870.4923156089399 870.4917649679301 37.274 1 -0.13136476660337953 0.03191156940863995 0.40847128557836004 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000475274.1_1_17:58322664-58322841:-|nuORF', 'ENST00000342691.5_1_X:40767440-40767641:+|nuORF'] 17491 7115 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.5352099358602 32.376 2 -0.13138715858701533 0.03191156940863995 0.4085470826537688 ['ENSG00000162378|ENST00000294353|ZYG11B'] 100162 13963 SITSELHAV True PC9_epitope_Rep1 955.4974605590301 955.49636993586 58.545 2 -0.13140482467625283 0.03191156940863995 0.40860688298765524 ['ENSG00000004700|ENST00000444129|RECQL', 'RECQL|p.R203Sfs*4|1|0.07|ENSG00000004700|chr12:21483467-21483468|-/AGTTA|frameshift_variant'] 43560 12943 IGRSSELAV True PC9_epitope_Rep4 930.5134449763399 930.51234993586 57.672 2 -0.13140660685566324 0.03191156940863995 0.4086129157498955 ['ENSG00000226763|ENST00000417606|SRRM5'] 68690 19822 LTKGYNSVLNV True PC9_epitope_Rep5 1206.66083748602 1206.6597499358602 81.291 2 -0.13145503090646246 0.03191156940863995 0.4087768350155033 ['ENST00000512560.5_1_5:79279160-79279214:-|nuORF'] 2992 18191 AFIEKHWTF True PC9_epitope_Rep1 1177.59202965021 1177.5903749037902 74.761 3 -0.13152627132844769 0.03192860490548352 0.40901799485980933 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 29803 20388 FVPQFISQL True PC9_epitope_Rep6 1077.5858816406098 1077.58478993586 91.121 2 -0.13154897672517274 0.03192860490548352 0.40909485745471924 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 138340 8117 YHEHQANLL True PC9_epitope_Rep3 1123.5410567065098 1123.53940490379 36.198 3 -0.13161963537497873 0.03192860490548352 0.40933405599836215 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 83677 18703 PVEVQEVSL True PC9_epitope_Rep5 998.5284263341398 998.5273299358599 76.958 2 -0.13162494603239383 0.03192860490548352 0.40935203424411787 ['nc|ENSG00000141425|Q96P16-3|RPRD1A', 'ENSG00000141425|ENST00000399022|RPRD1A'] 3828 7676 AGVLREEIQ True NCI_RA007_Epitope_Rep4 1013.5505587610498 1013.54946993586 36.187 2 -0.13165714043161858 0.031943142767885034 0.40946102312476196 ['STXBP5L|p.Q1114Hfs*9|1|0.17|ENSG00000145087|chr3:121418379-121418379|A/-|frameshift_variant', 'ENSG00000145087|ENST00000471454|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9-2|STXBP5L', 'STXBP5L|p.I702Mfs*17|1|0.24|ENSG00000145087|chr3:121279951-121279951|T/-|frameshift_variant', 'STXBP5L|p.W929*|1|0.17|ENSG00000145087|chr3:121407369-121407369|G/-|frameshift_variant'] 78564 6881 NYQKRFQNL True PC9_epitope_Rep2 1209.6254550368096 1209.6243499358602 31.869 2 -0.13167562291956977 0.031943142767885034 0.4095235931184406 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 58783 17054 LESIISGAAL True PC9_epitope_Rep5 972.54916177872 972.54806993586 70.617 2 -0.1316864480193238 0.031943142767885034 0.4095602402320574 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'ENST00000522730.1_1_5:138160461-138163428:+|nuORF', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2'] 62469 16001 LLIDDKGTIKL True PC9_epitope_Rep6 1227.74383883399 1227.74218490379 73.861 3 -0.13169038964277327 0.031943142767885034 0.4095735841726098 ['ENSG00000170312|ENST00000395284|CDK1'] 142385 14683 YYEKQFPEI True PC9_epitope_Rep6 1215.5811901829898 1215.58008993586 68.407 2 -0.13174261721709768 0.031943142767885034 0.40975039667198765 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2-SCARB1|15|fusion', 'NCOR2-SCARB1|13|fusion', 'NCOR2-SCARB1|8|fusion', 'NCOR2-SCARB1|6|fusion', 'NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|2|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|4|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 120052 13542 VDSQILYY True H1975_Epitope_Rep2 999.49131254943 999.49020993586 57.226 2 -0.13174420957360666 0.031943142767885034 0.4097557875233195 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 4654 14932 ALAFSDETL True PC9_epitope_Rep4 965.47057710485 965.46948993586 65.376 2 -0.13175147863526945 0.031943142767885034 0.4097803966410719 ['ENSG00000262655|ENST00000576479|SPON1'] 92617 5650 RNAGDEVTI True PC9_epitope_Rep2 973.48287312405 973.48176993586 27.118 2 -0.13185956146412695 0.031943142767885034 0.41014631369470117 ['ENSG00000172554|ENST00000308624|SNTG2'] 133450 14877 VVYGGGAAEI True PC9_epitope_Rep3 934.4759968384599 934.47488993586 62.361 2 -0.1318936333624436 0.03195892389988677 0.41026166758804683 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 57602 10665 LEEANNDLENK True NCI_RA007_Epitope_Rep2 1287.5942740478297 1287.59316993586 46.083 2 -0.13193942316866797 0.03195892389988677 0.4104166956078189 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 2826 7174 AEVDAAMAA True NCI_RA007_Epitope_Rep3 847.3745685450299 847.37346993586 35.333 2 -0.1319419144293961 0.03195892389988677 0.41042513019526083 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 57264 7685 LDYEVEAYRR True H1975_Epitope_Rep1 1312.6411646706 1312.64006993586 34.526 2 -0.13195725791013627 0.03195892389988677 0.41047707830540187 ['ENSG00000229549|ENST00000287721|TSPY8'] 49001 9705 KEFNFPEEA True NCI_RA007_Epitope_Rep4 1109.5029398622898 1109.50184993586 44.175 2 -0.13197521247843363 0.03195892389988677 0.4105378670327919 ['ENSG00000105063|ENST00000412770|PPP6R1', 'ENST00000589343.1_1_19:55750771-55751051:-|nuORF'] 42765 13482 IEMDPPALPP True H1975_Epitope_Rep2 1078.53688284286 1078.53578993586 56.991 2 -0.13198810427154678 0.03195892389988677 0.41058151494335415 ['nc|ENSG00000117461|Q92569-2|PIK3R3', 'ENSG00000117461|ENST00000262741|PIK3R3', 'ENST00000518292.1_1_5:67586526-67589028:+|nuORF', 'nc|ENSG00000145675|P27986-2|PIK3R1'] 120275 12104 VEDFDREFR True H1975_Epitope_Rep1 1211.55710069347 1211.5560099358602 51.572 2 -0.13202652666742093 0.03197719818834921 0.4107116031559395 ['ENSG00000125998|ENST00000374408|FAM83C', 'FAM83C|p.N530Qfs*40|1|0.45|ENSG00000125998|chr20:35287191-35287192|-/G|frameshift_variant'] 52927 9896 KPGKPRKRKKR True NCI_RA007_Epitope_Rep4 1377.9157042427698 1377.91405490379 44.912 3 -0.13202826612198584 0.03197719818834921 0.41071749253101014 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 31586 12231 GEEMPGLSV True H1975_Epitope_Rep1 917.4164333570099 917.41532993586 52.069 2 -0.13206215121162354 0.03199609565641776 0.4108322199076232 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 66665 10859 LSKTSVVDL True PC9_epitope_Rep1 960.54916177872 960.54806993586 46.656 2 -0.1321260755101957 0.032012492680070274 0.41104865646627115 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 89237 18397 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48506993586 76.095 2 -0.13214210058294193 0.032012492680070274 0.4111029152010324 ['ENSG00000167658|ENST00000309311|EEF2'] 114256 6183 TPNGNSLSA True PC9_epitope_Rep1 859.40356017419 859.40246993586 28.598 2 -0.1321608769969943 0.032012492680070274 0.4111664899205596 ['ENSG00000092621|ENST00000641023|PHGDH', 'PHGDH|p.H275Qfs*2|1|0.28|ENSG00000092621|chr1:119737144-119737145|-/A|frameshift_variant'] 6866 10749 AQIDGTLST True PC9_epitope_Rep2 904.4501760134401 904.44962496793 46.665 1 -0.13217442608222005 0.032012492680070274 0.4112123657313825 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 84225 19580 PYLFPVAA True PC9_epitope_Rep6 876.4745402864799 876.47344993586 87.979 2 -0.13220142669446774 0.032012492680070274 0.41130378754898045 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 54142 15969 KVPEWVDTV True PC9_epitope_Rep4 1071.5600608155898 1071.5594749679299 69.354 1 -0.13221110229729635 0.032030136825873946 0.4113365484985288 ['ENSG00000105372|ENST00000598742|RPS19'] 28715 19399 FSRQWADTF True PC9_epitope_Rep5 1156.53015766964 1156.5290699358602 79.664 2 -0.13221537001961747 0.032030136825873946 0.41135099875106157 ['WDR91|p.D718Pfs*28|1|0.1|ENSG00000105875|chr7:135186243-135186244|-/CACGGTGACCACAGGGG|frameshift_variant', 'nc|ENSG00000105875|A4D1P6-2|WDR91', 'WDR91|p.E606Rfs*77|1|0.26|ENSG00000105875|chr7:135188498-135188498|C/-|frameshift_variant', 'ENSG00000105875|ENST00000354475|WDR91', 'nc|ENSG00000105875|A4D1P6-3|WDR91', 'ENST00000466182.5_1_7:134882699-134896254:-|nuORF'] 134563 16296 VYSEKVMHMF True PC9_epitope_Rep5 1269.58860114589 1269.58696490379 67.676 3 -0.1322401853844889 0.032030136825873946 0.4114350224270586 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'MYO18A|p.A484Gfs*3|1|0.27|ENSG00000196535|chr17:29121132-29121132|G/-|frameshift_variant', 'nc|ENSG00000196535|Q92614-2|MYO18A'] 102922 12625 SPAVIVGLLK True H1975_Epitope_Rep1 995.6379172134699 995.63682993586 53.612 2 -0.13230320862664222 0.032067296432196114 0.41164841873648517 ['ENSG00000092621|ENST00000641023|PHGDH', 'PHGDH|p.E381Q|1|0.23|ENSG00000092621|chr1:119741829-119741829|G/C|missense_variant', 'ENST00000482968.1_1_1:120282927-120286660:+|nuORF'] 71360 19139 LYRLKFNEF True PC9_epitope_Rep3 1228.6604435632 1228.65880490379 78.838 3 -0.1323039422173748 0.032067296432196114 0.41165090269126725 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 88985 20056 QVIPQFQTV True PC9_epitope_Rep3 1058.5760452328998 1058.57547496793 82.396 1 -0.13231365530906428 0.032067296432196114 0.41168379148421513 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 142512 19188 YYIFIPSKF True PC9_epitope_Rep6 1176.6219327961599 1176.62029490379 86.458 3 -0.13234419832562827 0.03210570486172102 0.4117872115141145 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 27382 8791 FLVGTLTYR True H1975_Epitope_Rep1 1068.59678067748 1068.59568993586 38.744 2 -0.1323713101025441 0.03214285714285714 0.411879013896176 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.N627Kfs*7|1|0.66|ENSG00000134982|chr5:112835084-112835085|-/A|frameshift_variant', 'APC|p.R805Dfs*15|1|0.71|ENSG00000134982|chr5:112838007-112838007|C/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 41148 15925 HVDGFIANV True PC9_epitope_Rep1 970.4872302284999 970.48612993586 66.065 2 -0.13239282555373735 0.03214285714285714 0.41195186717799737 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000473864.1_1_3:156528118-156528448:-|nuORF', 'ENST00000414718.1_1_20:12360810-12361446:+|nuORF'] 12306 17548 DINTDGAVNF True PC9_epitope_Rep6 1064.47745339044 1064.47634993586 80.138 2 -0.1324222167311178 0.03214285714285714 0.41205138902558475 ['ENSG00000143546|ENST00000368733|S100A8'] 42753 5540 IELRGAAAA True H1975_Epitope_Rep2 870.4923156089399 870.49120993586 26.317 2 -0.13245149560753322 0.03215735248204808 0.41215053133191687 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 48151 8419 IYPPKLHQF True NCI_RA007_Epitope_Rep4 1141.62841515893 1141.62676490379 39.198 3 -0.1324551026324567 0.03215735248204808 0.412162745264242 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 5755 7211 APASLTSA True PC9_epitope_Rep5 716.3704691407601 716.36992496793 32.701 1 -0.1324893635338732 0.03215735248204808 0.4122787583955107 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 53348 4963 KQQAPPPPP True NCI_RA007_Epitope_Rep5 958.5236157372198 958.52250993586 25.791 2 -0.13253362013264977 0.03215735248204808 0.41242862003516023 ['ENSG00000125398|ENST00000245479|SOX9'] 85924 8537 QHGGPAVAI True PC9_epitope_Rep3 848.4504507969599 848.44934993586 37.793 2 -0.13255401541908457 0.03215735248204808 0.4124976830537725 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 47449 16538 IVMQEVETV True PC9_epitope_Rep4 1046.53179746242 1046.5307099358602 71.587 2 -0.13257370571355787 0.03215735248204808 0.41256435912084627 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 18753 3342 ELCFIHHWRER True NCI_RA007_Epitope_Rep1 1524.7408362255599 1524.73918490379 16.894 3 -0.13259066844250172 0.03215735248204808 0.4126217992370717 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J'] 72861 10779 MPQSGTGVSV True PC9_epitope_Rep2 961.45388149489 961.45333496793 46.779 1 -0.13260644845278483 0.03215735248204808 0.41267523456550925 ['ENSG00000115233|ENST00000409682|PSMD14'] 96445 7958 SAAHAIVSV True PC9_epitope_Rep2 853.46576650793 853.46466993586 35.974 2 -0.13264011668059883 0.032174981951571674 0.41278924480678436 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 69664 6061 LVDSNNPKI True PC9_epitope_Rep6 998.53965972418 998.53856993586 31.688 2 -0.1326490216003801 0.032174981951571674 0.4128193995523189 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 36435 17687 GVGAVNISV True PC9_epitope_Rep1 814.45486747106 814.45376993586 72.827 2 -0.1326603816569221 0.032174981951571674 0.4128578682172769 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 76930 8311 NRDQYSHLL True PC9_epitope_Rep4 1144.56252042708 1144.5614299358601 39.425 2 -0.13268522982558223 0.032193237469026206 0.4129420121327242 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 69109 12700 LTRGQVWL True H1975_Epitope_Rep2 971.5552502186698 971.55414993586 53.951 2 -0.1326917045248358 0.032193237469026206 0.41296393762725037 ['ENST00000587009.5_1_19:4446812-4447750:-|nuORF', 'ENST00000588238.1_1_19:4447432-4447750:-|nuORF'] 84200 5989 PYLDNQVRR True PC9_epitope_Rep5 1159.60980497267 1159.60816490379 28.032 3 -0.13271683934008005 0.03223100185347771 0.4130490527946348 ['ENST00000584808.1_1_6:32938512-32938569:+|nuORF', 'ENST00000415875.2_1_6:32938180-32938569:+|nuORF'] 93204 5671 RPPPPPPPP True PC9_epitope_Rep3 950.5337864980999 950.53268993586 26.888 2 -0.13275223302827385 0.03223100185347771 0.41316890881267804 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 85858 11229 QHFDSVM[Oxidation]QL True PC9_epitope_Rep2 1119.5018946969099 1119.5007899358602 48.52 2 -0.1329637954938403 0.03226813375473097 0.41388535454384634 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 12711 5877 DLEAHIDSANK True PC9_epitope_Rep4 1211.57823006087 1211.57659490379 29.501 3 -0.1329773140901855 0.03226813375473097 0.413931135562071 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 41675 19458 IAGPGLPDL True PC9_epitope_Rep1 851.47526856247 851.47472496793 79.661 1 -0.13300360559932706 0.03226813375473097 0.4140201726384749 ['nc|ENSG00000284922|Q8WZ04-2|TOMT', 'nc|ENSG00000284922|Q8WZ04|TOMT'] 54495 17329 KYIDFDHVF True PC9_epitope_Rep6 1182.57095985246 1182.5698699358602 79.269 2 -0.13304453937218838 0.03228449368940561 0.4141587970392709 ['ENSG00000007545|ENST00000397412|CRAMP1'] 14601 9200 DTYLSHFNPR True NCI_RA007_Epitope_Rep2 1248.58873517492 1248.5870849037901 40.396 3 -0.13304867976860377 0.03228449368940561 0.41417281876595696 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 46204 8903 ISMTFPACWK True NCI_RA007_Epitope_Rep1 1182.55657274162 1182.5554699358602 38.631 2 -0.1330598496033648 0.03228449368940561 0.41421064619979514 ['nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 113344 7947 TLRRKIEEEWK True H1975_Epitope_Rep3 1486.82561139534 1486.82395490379 35.537 3 -0.1331017991841839 0.03228449368940561 0.4143527120405701 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 120387 3741 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 19.464 2 -0.13314114586729525 0.03228449368940561 0.41448596382058256 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 5209 20829 ALPDDLVEV True PC9_epitope_Rep2 969.5018772331299 969.50132496793 85.562 1 -0.1332217551549608 0.032302740661269876 0.41475895838588844 ['ENSG00000120756|ENST00000457734|PLS1'] 118374 5475 TYNQKHSLF True NCI_RA007_Epitope_Rep3 1136.5614577979202 1136.56036993586 28.543 2 -0.13322227592462613 0.032302740661269876 0.41476072205548814 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 129047 7396 VQNGKVIGV True PC9_epitope_Rep3 912.5392658013598 912.53816993586 33.458 2 -0.13324929047210093 0.03231972537010669 0.41485221131508826 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 73829 19941 NALGAISLE True PC9_epitope_Rep1 886.47599683846 886.47544496793 81.523 1 -0.13327643554561244 0.03231972537010669 0.41494414297743776 ['ENSG00000171595|ENST00000311014|DNAI2', 'nc|ENSG00000171595|Q9GZS0-2|DNAI2', 'ENST00000579055.5_1_17:72281302-72310327:+|nuORF'] 80378 7367 PGHLQEGFG True PC9_epitope_Rep2 940.4402800360799 940.43918993586 33.718 2 -0.13328058869005466 0.03231972537010669 0.4149582083771334 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 139848 5997 YPNSGSVSA True PC9_epitope_Rep6 880.39266113732 880.39156993586 31.388 2 -0.1332918464726924 0.03231972537010669 0.41499633500220345 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 6469 9562 APSGNYVAC True PC9_epitope_Rep3 880.3749028981999 880.37380993586 41.733 2 -0.13332333248634318 0.032337968832283355 0.4151029686944771 ['ENSG00000114450|ENST00000232564|GNB4'] 142373 15576 YYEKLHTYF True PC9_epitope_Rep3 1262.5971746003 1262.59552490379 65.061 3 -0.13335821493611713 0.032337968832283355 0.4152211056185769 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 57472 6797 LEDATHIALR True NCI_RA007_Epitope_Rep2 1137.61422164677 1137.6131299358601 31.056 2 -0.13346799029564077 0.03235557982603269 0.4155928868686345 ['nc|ENSG00000196505|Q9NXN4-2|GDAP2', 'ENSG00000196505|ENST00000369443|GDAP2', 'GDAP2|p.E247Sfs*11|1|0.18|ENSG00000196505|chr1:117899118-117899118|T/-|frameshift_variant', 'ENST00000493555.5_1_1:118439453-118462815:-|nuORF'] 89177 17976 QVSEVFNTV True PC9_epitope_Rep1 1021.5080252427299 1021.50692993586 73.937 2 -0.1335410334718894 0.03235557982603269 0.41584026816775654 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 78444 15861 NYLSTMKNF True PC9_epitope_Rep4 1116.52738078832 1116.5262899358602 68.941 2 -0.13354323309941082 0.03235557982603269 0.4158477178564429 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 58858 19915 LESVPMTWDP True PC9_epitope_Rep1 1173.53761111885 1173.53650993586 81.421 2 -0.13356578187578605 0.03236813883201716 0.4159240860498192 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 60964 16933 LIDQKVYEL True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 69.956 2 -0.13368147977176922 0.03236813883201716 0.4163159343180921 ['nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF'] 5763 6591 APASVPAQA True PC9_epitope_Rep1 810.4235673427798 810.42246993586 30.158 2 -0.1337126180744465 0.03236813883201716 0.41642139493077746 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 64167 22325 LPFTPILAS True PC9_epitope_Rep2 957.5535188831699 957.55242993586 91.356 2 -0.13371957421385322 0.03236813883201716 0.4164449543361402 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 89246 17702 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48506993586 76.115 2 -0.13372273371033297 0.03236813883201716 0.4164556550833289 ['ENSG00000167658|ENST00000309311|EEF2'] 23530 16286 EVVRPLVRL True PC9_epitope_Rep3 1079.6815133609498 1079.68040993586 67.781 2 -0.13372403463038868 0.03236813883201716 0.41646006110791234 ['nc|ENSG00000141161|Q8IWX7-2|UNC45B', 'ENSG00000141161|ENST00000394570|UNC45B', 'nc|ENSG00000141161|Q8IWX7|UNC45B'] 47144 10186 ITVNDLPVGR True NCI_RA007_Epitope_Rep1 1082.6084079903399 1082.60730993586 43.632 2 -0.13376423195833106 0.03236813883201716 0.4165962037609536 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 136197 11144 WRRWCWRWPWR True NCI_RA007_Epitope_Rep2 1772.8735221609597 1772.87188490379 47.928 3 -0.1338192922540994 0.03236813883201716 0.41678268585015116 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 73469 12930 MVAPVTGNDV True PC9_epitope_Rep4 1001.48518162317 1001.48408993586 57.619 2 -0.13382822301811445 0.03236813883201716 0.41681293325968805 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 2695 10779 AESWTHWAT True H1975_Epitope_Rep2 1087.47230844035 1087.47120993586 46.492 2 -0.13388446934478263 0.03236813883201716 0.41700343312338783 ['ENST00000399767.5_1_22:18226574-18257190:-|nuORF'] 132351 6835 VVAAHLAGA True PC9_epitope_Rep1 807.46028720467 807.45918993586 31.097 2 -0.13391771592825466 0.03236813883201716 0.4171160358025508 ['ENSG00000160161|ENST00000291495|CILP2'] 96604 20287 SAGPEGLLGV True PC9_epitope_Rep2 898.4759968384599 898.47544496793 83.456 1 -0.13408077330516674 0.03242473873030728 0.4176682967262271 ['ENSG00000130935|ENST00000253247|NOL11', 'NOL11|p.L15M|1|0.25|ENSG00000130935|chr17:67717990-67717990|C/A|missense_variant', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 72726 7655 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep3 1057.4750115590298 1057.4744749679298 34.428 1 -0.1340878088420906 0.03242473873030728 0.41769212555297136 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'TXNRD1|p.Y161C|1|0.29|ENSG00000198431|chr12:104311357-104311357|A/G|missense_variant'] 106772 18295 SVAAQLTGV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 75.386 2 -0.13409770750908379 0.03242473873030728 0.4177256515925086 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 21925 5038 ESDTHMTLP True H1975_Epitope_Rep3 1029.44371073401 1029.4426099358602 24.499 2 -0.13415124812763027 0.032461835409721 0.41790698981404634 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.E805Ffs*3|1|0.08|ENSG00000048028|chr11:113805034-113805035|-/AGGTGAA|frameshift_variant'] 13225 15291 DLSLFSYDD True H1975_Epitope_Rep2 1073.45532096353 1073.45477496793 63.975 1 -0.13417853546528485 0.032461835409721 0.41799941016448056 ['nc|ENSG00000173867|Q7L5Y6-2|DET1', 'ENSG00000140543|ENST00000268148|DET1'] 83144 8354 PSRPAAPSL True PC9_epitope_Rep5 894.49231560894 894.49120993586 37.076 2 -0.13421340220596065 0.032461835409721 0.418117501517352 ['ENSG00000169733|ENST00000310496|RFNG', 'ENST00000582478.5_1_17:80008786-80009642:-|nuORF'] 37573 18485 GVVPQLVKL True PC9_epitope_Rep4 951.6117024656298 951.61115496793 79.175 1 -0.13425496849487006 0.0324794322922759 0.41825828389419667 ['ENSG00000182481|ENST00000330459|KPNA2'] 17557 10503 EHGPENIVM True PC9_epitope_Rep2 1024.46478053176 1024.4636899358602 45.721 2 -0.13432191053644912 0.0324794322922759 0.41848501247386233 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 37034 9909 GVPENGYQTLY True H1975_Epitope_Rep1 1239.5771674317102 1239.57606993586 43.05 2 -0.13437480621527972 0.0324794322922759 0.4186641669358726 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 84138 18877 PYDQSGFVSAI True PC9_epitope_Rep1 1182.5557037111398 1182.55460993586 77.395 2 -0.13442258252422226 0.03249829418071937 0.41882598238054813 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000595934.1_1_19:50360240-50360429:+|nuORF', 'ENST00000498792.1_1_3:120025975-120026458:+|nuORF', 'ENST00000596424.1_1_19:50360315-50362048:+|nuORF', 'nc|ENSG00000104960|Q86YD1-3|PTOV1'] 120535 5725 VEFRNYCLRYR True H1975_Epitope_Rep1 1517.75615193653 1517.7544949037901 27.09 3 -0.13452988934398868 0.03253538149635463 0.41918942370723655 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 132542 16410 VVDSGAGFTV True PC9_epitope_Rep2 950.4709114580199 950.46980993586 68.365 2 -0.13453874298339977 0.03253538149635463 0.41921941038434607 ['ENSG00000110375|ENST00000264031|UPK2', 'ENST00000534788.1_1_11:118795899-118828340:+|nuORF'] 21814 7051 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58569490379 36.135 3 -0.1345438286127217 0.03253538149635463 0.41923663506357994 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 127616 8684 VPAAAAVAA True PC9_epitope_Rep4 739.42283906679 739.42229496793 40.894 1 -0.13458009340732954 0.03255424082340786 0.41935946138015767 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 44409 11854 ILGEAELQ True H1975_Epitope_Rep2 871.46509780159 871.46454496793 50.674 1 -0.13467165507385884 0.03257119466697854 0.41966957369268604 ['nc|ENSG00000137601|Q96PY6-4|NEK1', 'nc|ENSG00000137601|Q96PY6-2|NEK1', 'nc|ENSG00000137601|Q96PY6-6|NEK1', 'nc|ENSG00000137601|Q96PY6|NEK1', 'ENSG00000137601|ENST00000507142|NEK1'] 40882 20124 HSFTEFMGV True PC9_epitope_Rep1 1053.45896687533 1053.4578699358601 82.237 2 -0.13467318236462864 0.03257119466697854 0.41967474649986647 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 38464 8791 HEPEPHIL True PC9_epitope_Rep5 970.4872302285 970.48612993586 38.757 2 -0.13468362537133818 0.03257119466697854 0.4197101160886768 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 85926 6602 QHGGPAVAI True PC9_epitope_Rep6 848.4504507969599 848.44934993586 34.102 2 -0.13471956820423708 0.03257119466697854 0.41983185132804457 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 60246 6223 LGQYRAGRP True H1975_Epitope_Rep3 1016.5515618205599 1016.55046993586 28.949 2 -0.1348133154830154 0.03260572987721692 0.4201493641507333 ['ENSG00000103404|ENST00000219689|USP31'] 23877 11165 EYIRSLNQF True NCI_RA007_Epitope_Rep2 1168.58767254576 1168.58656993586 48.012 2 -0.1348389571960953 0.03260572987721692 0.42023620981891074 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 78631 9448 NYTARFSRF True PC9_epitope_Rep6 1160.57269118796 1160.5710449037902 46.575 3 -0.1348626182354266 0.03260572987721692 0.4203163470378905 ['ENSG00000144231|ENST00000272645|POLR2D'] 136950 10631 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.38026993586 46.205 2 -0.13487530870775252 0.03260572987721692 0.42035932815677235 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 22083 9168 ESPALLLQK True NCI_RA007_Epitope_Rep4 997.5807962601699 997.57968993586 42.105 2 -0.13491966688206872 0.03260572987721692 0.42050956371526577 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 110978 5122 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 25.078 2 -0.13493436798940803 0.03260572987721692 0.42055935441079895 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 28142 15171 FRDAFTQEL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 70.432 2 -0.13499791891127078 0.03260572987721692 0.42077459227757474 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 83372 5274 PTGVRSWRLR True NCI_RA007_Epitope_Rep3 1226.6996230365799 1226.69797490379 27.75 3 -0.1351068509199709 0.032679865928755165 0.4211435266526851 ['ENSG00000183304|ENST00000381003|FAM9A'] 61173 11100 LILCFQRM True PC9_epitope_Rep6 1022.54052875466 1022.5394299358601 53.623 2 -0.13512040991104243 0.032679865928755165 0.42118944840872685 ['ENST00000464491.5_1_2:172180771-172182690:-|nuORF'] 114237 17875 TPMPPISSV True PC9_epitope_Rep3 927.47355431031 927.47244993586 73.953 2 -0.13513487853266754 0.032679865928755165 0.42123845084402955 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 57804 7143 LEERTPPVP True H1975_Epitope_Rep3 1036.5553097883198 1036.5542099358602 32.448 2 -0.1352059425735546 0.032679865928755165 0.42147912999393405 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 72517 20823 MLFPGSIAL True PC9_epitope_Rep6 947.51502519947 947.51392993586 92.868 2 -0.1352900362883409 0.032679865928755165 0.4217639354791267 ['ENSG00000101367|ENST00000375571|MAPRE1'] 127614 9160 VPAAAAVAA True PC9_epitope_Rep2 739.42283906679 739.42229496793 40.573 1 -0.1352994975484682 0.032679865928755165 0.42179597834731386 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 27474 15505 FMDPASALY True H1975_Epitope_Rep3 1013.45281886573 1013.45172993586 65.057 2 -0.1353451882227803 0.03269871582516515 0.42195072044269605 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 6496 8513 APSRGFVV True PC9_epitope_Rep4 831.4602872046698 831.45918993586 40.221 2 -0.13541894401483554 0.03275653766709537 0.422200509641646 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169181-242169382:-|nuORF'] 37421 16459 GVTEVLHGL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 71.279 2 -0.13557140606414905 0.03277538533486623 0.42271684550399574 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion'] 5726 7668 APAPLTSA True PC9_epitope_Rep4 726.39120458534 726.39065496793 36.876 1 -0.1356197106234945 0.03279295428860917 0.4228804336909576 ['ENSG00000247596|ENST00000305533|TWF2'] 33889 13962 GLPSVHSESL True PC9_epitope_Rep5 1024.5189242796 1024.5178299358602 58.726 2 -0.13563024171697088 0.03279295428860917 0.42291609811331504 ['nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENSG00000177034|ENST00000512528|MTX3', 'ENST00000512560.5_1_5:79286041-79287061:-|nuORF'] 76529 17152 NQINGSFAL True PC9_epitope_Rep6 962.48214484806 962.48159496793 78.561 1 -0.13564882368275571 0.03279295428860917 0.4229790273303389 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 85122 16791 QELPEFWEA True H1975_Epitope_Rep2 1147.51858992643 1147.51748993586 69.832 2 -0.13567570027155265 0.03280924269877453 0.4230700465584761 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 33658 19724 GLGPLQLAV True PC9_epitope_Rep5 866.5225531080599 866.52144993586 80.915 2 -0.13567991918669722 0.03280924269877453 0.42308433413713875 ['ENST00000585457.5_1_17:42253853-42254417:-|nuORF'] 15349 9086 EAGFSTQTV True H1975_Epitope_Rep2 938.4345259493 938.43342993586 39.902 2 -0.13569164254014124 0.03280924269877453 0.4231240358370828 ['nc|ENSG00000197168|Q6P3R8|NEK5', 'ENSG00000197168|ENST00000684899|NEK5'] 118105 20656 TYGPSFPAF True PC9_epitope_Rep4 985.4545331178899 985.4539849679301 87.611 1 -0.13569835261967003 0.03280924269877453 0.42314675980744 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 86137 7594 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep3 1118.4736312427299 1118.4725299358602 34.191 2 -0.13575025231237473 0.03280924269877453 0.4233225194156823 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 118412 14956 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 62.66 2 -0.1357689268114495 0.03282744647275419 0.423385760670863 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 609 5064 AASAETASVT True NCI_RA007_Epitope_Rep2 906.42944056886 906.4288949679301 24.323 1 -0.13577501910594414 0.03282744647275419 0.4234063922000404 ['nc|ENSG00000132952|Q5W0Q7-2|USPL1', 'ENSG00000132952|ENST00000255304|USPL1'] 133454 14786 VVYGGGAAEI True PC9_epitope_Rep5 934.4759968384599 934.47544496793 61.875 1 -0.13581760455943376 0.03284628872004676 0.4235506069992054 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 28835 16847 FSYLLEQDL True NCI_RA007_Epitope_Rep3 1126.55464108198 1126.55354993586 74.139 2 -0.1358484446690769 0.03286384976525822 0.4236550456924583 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-4|FBXO11'] 1259 14957 AEDGFFVPP True H1975_Epitope_Rep3 977.4494477374499 977.4488949679301 62.919 1 -0.1358618625004008 0.03286384976525822 0.4237004844007183 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 64261 8374 LPHGFTNM[Oxidation]A True PC9_epitope_Rep2 1002.4593016089401 1002.4582099358599 37.584 2 -0.13586895187060197 0.03286384976525822 0.4237244920937188 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 64047 20976 LPALSLLAA True PC9_epitope_Rep4 867.5429541994699 867.5424049679301 88.845 1 -0.13590138147501726 0.03288012778059137 0.4238343124170664 ['ENST00000311626.8_1_17:46629537-46651367:-|nuORF'] 24341 16755 EYVSQHLVF True PC9_epitope_Rep4 1120.5553097883198 1120.5542099358602 72.415 2 -0.13592737641095717 0.03288012778059137 0.4239223417192965 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 52512 12258 KLAPPLVTL True NCI_RA007_Epitope_Rep5 950.6164534929001 950.61534993586 53.801 2 -0.1359697834179736 0.03288012778059137 0.42406594787892216 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 76361 9242 NPYYGGESA True PC9_epitope_Rep1 956.3875757568799 956.3870249679301 40.401 1 -0.13597542269537397 0.03288012778059137 0.42408504450833023 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 67811 21370 LTAEDLFEA True PC9_epitope_Rep2 1007.4811417885498 1007.48004993586 87.669 2 -0.13598317018474265 0.03288012778059137 0.42411128026746353 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 64232 15566 LPGVDALSNI True H1975_Epitope_Rep3 997.5444107514501 997.54330993586 65.292 2 -0.13609202947126875 0.032898965698591714 0.424479911926574 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 142359 5542 YYEHVKARF True PC9_epitope_Rep4 1211.60874234351 1211.60710490379 28.081 3 -0.13612245902848208 0.03291716172259987 0.4245829543388087 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 78697 4333 PAAAAAAAAA True PC9_epitope_Rep4 754.3973525949399 754.39680496793 23.094 1 -0.1361611887904559 0.03291716172259987 0.4247141023583868 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENST00000257359.6_1_11:130297588-130298293:-|nuORF', 'ENST00000370272.8_1_1:93811487-93811679:+|nuORF', 'ENST00000280665.10_1_12:2062308-2062389:-|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 38891 17911 HHFDSILSM True PC9_epitope_Rep5 1085.49641501321 1085.4953099358602 73.913 2 -0.13618489924412314 0.03293407342487097 0.4247943909019528 ['ENSG00000142961|ENST00000319928|MOB3C'] 47245 14285 IVCDVPSASA True PC9_epitope_Rep3 960.45863252216 960.4580849679301 60.035 1 -0.13619295993697839 0.03293407342487097 0.42482168598647135 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 16992 3957 EGALC[Carbamidomethyl]EENM[Oxidation]R True NCI_RA007_Epitope_Rep2 1223.49107259246 1223.48996993586 20.029 2 -0.13623424425339117 0.03293407342487097 0.42496148193258143 ['ENSG00000167658|ENST00000309311|EEF2'] 53068 5072 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 24.366 2 -0.13623596746179328 0.03293407342487097 0.42496731698825757 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 100926 22498 SLFFHFPPLL True PC9_epitope_Rep4 1216.66446631448 1216.6633699358601 94.769 2 -0.13624807453857998 0.03294649115974765 0.425008313391599 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000572932.1_1_16:16374097-16382502:+|nuORF'] 130046 13277 VSAYGPGLVY True H1975_Epitope_Rep2 1024.5229470308798 1024.5223749679299 56.199 1 -0.13625505899237908 0.03294649115974765 0.42503196375854707 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 6257 13803 APRAALVFA True PC9_epitope_Rep2 914.5337864980999 914.53268993586 58.376 2 -0.1363162707283745 0.03294649115974765 0.4252392337406464 ['ENSG00000170006|ENST00000304385|TMEM154'] 16398 8980 EEKAALEEY True H1975_Epitope_Rep3 1080.4975201286798 1080.49642993586 39.537 2 -0.1363254368069031 0.03294649115974765 0.42527027085888625 ['ENSG00000142621|ENST00000688493|FHAD1'] 17283 13891 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 61.333 2 -0.13632987373827832 0.03294649115974765 0.4252852946579026 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 141512 18096 YTLDGGDIINA True PC9_epitope_Rep6 1150.5506183307 1150.5495299358602 82.242 2 -0.1363335550352495 0.03294649115974765 0.4252977598062038 ['ENSG00000204628|ENST00000512805|RACK1'] 81797 18600 PLPPPLPPP True PC9_epitope_Rep2 923.54803957991 923.54694993586 76.897 2 -0.1363594794773229 0.03294649115974765 0.42538554157695074 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 5952 9941 APGYSYTAA True PC9_epitope_Rep2 899.4024975450299 899.40194496793 43.568 1 -0.13638241647081684 0.03294649115974765 0.42546320716140307 ['ENSG00000172115|ENST00000305786|CYCS'] 91124 14008 RFVEKYTEL True PC9_epitope_Rep3 1183.62372370131 1183.62208490379 58.963 3 -0.13638324836693613 0.03294649115974765 0.4254660239862941 ['ENSG00000181610|ENST00000313608|MRPS23'] 27271 21824 FLQEQLVEL True PC9_epitope_Rep5 1117.60192562757 1117.60082993586 88.979 2 -0.13644381269357705 0.03294649115974765 0.42567109489084765 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 64915 16693 LQEEKLIYV True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 69.457 2 -0.13647778842766534 0.03294649115974765 0.42578613528748394 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 136877 6465 YAEFQYRRRHR True H1975_Epitope_Rep1 1580.8072759926 1580.80564490379 29.929 3 -0.1365281532855228 0.03298222386635774 0.42595666654034553 ['ENSG00000001629|ENST00000265742|ANKIB1'] 137629 6065 YEGPPDDEA True H1975_Epitope_Rep2 991.3770706428298 991.37596993586 28.306 2 -0.13654442018932544 0.03298222386635774 0.4260117444094437 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 713 15061 AAVEWFDGK True PC9_epitope_Rep2 1021.4868958753298 1021.48578993586 63.189 2 -0.13654468513676046 0.03298222386635774 0.42601264148890217 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 133821 14262 VYGDFQEAF True NCI_RA007_Epitope_Rep3 1074.4658260775798 1074.46472993586 63.417 2 -0.13655285782721516 0.03298222386635774 0.42604031318062313 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A'] 91286 9934 RGNDSILV True PC9_epitope_Rep1 872.4715801643599 872.47048993586 43.073 2 -0.13660482626151052 0.03298222386635774 0.426216270145789 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant'] 62866 19864 LLMTSLTES True PC9_epitope_Rep1 993.50524836141 993.50414993586 81.224 2 -0.13674468901582 0.03307892994821074 0.4266898097334456 ['ENSG00000175928|ENST00000319331|LRRN1'] 114096 21379 TPFTGPFISV True PC9_epitope_Rep4 1064.55424715916 1064.55367496793 90.403 1 -0.13677963606901164 0.033115934975177654 0.42680812829184395 ['ENSG00000164142|ENST00000435205|FHIP1A'] 68966 10576 LTPERFHNL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 45.628 3 -0.1367818850628994 0.033115934975177654 0.4268157425567453 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 113748 8403 TMDPKPLAY True H1975_Epitope_Rep2 1034.5106680950198 1034.50956993586 37.275 2 -0.13678721516135595 0.033115934975177654 0.42683378828464413 ['ENSG00000163328|ENST00000392552|GPR155'] 99970 20262 SIPEGALVAV True PC9_epitope_Rep1 954.5385970950199 954.5380449679301 82.768 1 -0.13680287675056435 0.03313411334125022 0.42688681241070464 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 33510 18841 GLDQSLVSL True PC9_epitope_Rep4 930.5022115863 930.5016649679301 80.559 1 -0.1368351656843333 0.03313411334125022 0.4269961294803892 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 120385 4505 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 22.44 2 -0.1368817513657218 0.03315164492894686 0.4271538473992312 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 33424 7871 GLAEVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44286993586 38.079 2 -0.1369415963537809 0.03315164492894686 0.4273564516424141 ['ENSG00000170684|ENST00000303809|ZNF296'] 19963 22868 ELVTLLLSI True PC9_epitope_Rep2 999.6215984429899 999.62050993586 93.451 2 -0.13696151880886506 0.03315164492894686 0.42742389786516466 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 85405 13627 QEVQELPIP True NCI_RA007_Epitope_Rep4 1051.5549754351498 1051.5538699358601 59.637 2 -0.13700438759894426 0.03316917446907909 0.42756902586784495 ['nc|ENSG00000109046|Q9Y6I7-2|WSB1', 'ENSG00000109046|ENST00000262394|WSB1', 'nc|ENSG00000109046|Q9Y6I7-4|WSB1', 'ENST00000467843.6_1_17:25636020-25639392:+|nuORF'] 127333 18948 VMLDVPIRL True PC9_epitope_Rep6 1054.62088725034 1054.6197899358601 85.529 2 -0.13703963937499353 0.03316917446907909 0.42768836557366086 ['RASAL2|p.Q869Rfs*10|1|0.08|ENSG00000075391|chr1:178458318-178458318|C/-|frameshift_variant', 'ENSG00000075391|ENST00000367649|RASAL2', 'nc|ENSG00000075391|Q9UJF2|RASAL2'] 124820 11218 VHGPPVQL True PC9_epitope_Rep5 845.47593726881 845.47484993586 48.139 2 -0.13705798370765065 0.03316917446907909 0.42775046701584873 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 14928 15993 DYEAGHLSF True PC9_epitope_Rep4 1037.4454249861699 1037.4443299358602 69.45 2 -0.1370760326741465 0.03318734793187348 0.427811568144691 ['nc|ENSG00000154370|Q96F44-3|TRIM11', 'ENSG00000154370|ENST00000284551|TRIM11'] 64894 10519 LQEDPPAGV True PC9_epitope_Rep4 924.4552613938798 924.45416993586 48.185 2 -0.13711520665029348 0.03318734793187348 0.42794418233150283 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 2407 16645 AEQFAVGEI True PC9_epitope_Rep1 962.4709114580198 962.4703649679301 68.854 1 -0.13714474617080566 0.033202934937038985 0.4280441800823762 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 118712 15390 TYTLRVFEL True NCI_RA007_Epitope_Rep4 1140.61791004488 1140.6168099358601 66.871 2 -0.13715755816276357 0.033202934937038985 0.42808755113837554 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 108151 18397 SYFRWRETL True PC9_epitope_Rep1 1256.6302060640796 1256.62855490379 75.554 3 -0.13716490285083577 0.033202934937038985 0.4281124142249445 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 77560 12827 NTDNLLTEY True H1975_Epitope_Rep3 1081.49276910141 1081.49217496793 54.559 1 -0.1371849126689334 0.033202934937038985 0.42818015069675575 ['ENSG00000164151|ENST00000296564|ICE1', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF', 'ICE1|p.P362Tfs*7|1|0.08|ENSG00000164151|chr5:5457722-5457723|-/A|frameshift_variant'] 93665 5886 RQRRQVEEEIL True NCI_RA007_Epitope_Rep4 1454.7953738962199 1454.7937349037902 29.264 3 -0.13722294851756456 0.033202934937038985 0.4283089067682391 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 334 11637 AAIENLNEA True PC9_epitope_Rep5 943.46107505031 943.46052496793 49.756 1 -0.13724054262232324 0.033202934937038985 0.4283684643578868 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 35889 3975 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 22.023 2 -0.13731865765220763 0.03322175080767584 0.42863288562347807 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 137465 13055 YEDSGIPLPA True H1975_Epitope_Rep2 1060.5076908895599 1060.50717496793 55.338 1 -0.13741771735260427 0.03323862530650372 0.42896819315992923 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 9239 18124 AVPDGPLQEV True PC9_epitope_Rep5 1023.52367530687 1023.5225699358599 74.724 2 -0.1374616340470762 0.03323862530650372 0.42911684255073684 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 61765 19505 LLALALAL True H1975_Epitope_Rep2 796.54222592348 796.54167496793 80.938 1 -0.1374836561969256 0.03323862530650372 0.4291913821715787 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF', 'TGFBI|p.Y82Sfs*47|1|0.21|ENSG00000120708|chr5:136044069-136044069|A/-|frameshift_variant'] 129067 21298 VQPFLRVPL True PC9_epitope_Rep1 1067.64915060351 1067.6480499358602 86.75 2 -0.13749833288610275 0.03323862530650372 0.42924105880764685 ['nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENSG00000023287|ENST00000025008|RB1CC1', 'RB1CC1|p.D931Gfs*17|1|0.1|ENSG00000023287|chr8:52657039-52657040|-/T|frameshift_variant'] 109907 12005 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.4168749679301 51.338 1 -0.13751743745372852 0.033257438651799094 0.4293057221518617 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 5776 6232 APDEKYVAA True PC9_epitope_Rep1 962.4709114580199 962.46980993586 28.784 2 -0.13765825323186687 0.03330998521285703 0.42978232555456136 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 86768 22288 QLLNWVYLSL True PC9_epitope_Rep2 1247.69140933831 1247.6903099358601 91.209 2 -0.1376598537203608 0.03330998521285703 0.42978774237777395 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 2798 5329 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 25.56 2 -0.13766834742747608 0.03330998521285703 0.4298164891043994 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 84464 14993 QAIEKLEEI True PC9_epitope_Rep2 1071.58119018299 1071.58008993586 62.927 2 -0.1376718439610842 0.03330998521285703 0.4298283229977058 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B', 'ANKRD18A|p.E833A|1|0.3|ENSG00000180071|chr9:38577898-38577898|T/G|missense_variant', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 19936 17008 ELVITWETV True PC9_epitope_Rep1 1088.57537652656 1088.57426993586 70.244 2 -0.13767619638012302 0.03330998521285703 0.42984305357859126 ['ENSG00000144619|ENST00000418658|CNTN4', 'nc|ENSG00000144619|Q8IWV2-3|CNTN4', 'nc|ENSG00000144619|Q8IWV2-4|CNTN4'] 24635 9056 FAKDFMTYLSA True NCI_RA007_Epitope_Rep2 1292.61111041228 1292.61000993586 39.829 2 -0.137732831638055 0.03330998521285703 0.4300347305882248 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 109663 5769 TEAREAALP True H1975_Epitope_Rep2 956.4927095317598 956.49160993586 27.185 2 -0.13775862955452894 0.03330998521285703 0.43012203969610036 ['ENST00000314845.7_1_11:46418495-46418936:-|nuORF'] 19959 12332 ELVRRNVEL True PC9_epitope_Rep2 1126.64585612822 1126.64422490379 52.747 3 -0.13779463584182972 0.03330998521285703 0.43024389572415445 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 14475 12543 DTFLDSLQ True H1975_Epitope_Rep2 937.43927697657 937.43872496793 53.342 1 -0.13779574450869647 0.03330998521285703 0.4302476477512902 ['nc|ENSG00000169372|P78560-2|CRADD', 'ENST00000549615.5_1_12:94071236-94184481:+|nuORF', 'ENSG00000169372|ENST00000332896|CRADD'] 28795 18809 FSVDDVQTV True PC9_epitope_Rep2 1008.4763907612801 1008.47528993586 77.72 2 -0.13781742849779777 0.03332749664390358 0.4303210318139145 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 142443 18914 YYFEGIKQTF True PC9_epitope_Rep4 1294.6233893481397 1294.6217549037901 80.84 3 -0.1378195186852909 0.03332749664390358 0.4303281054933992 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 78854 18572 PAEPAFLA True PC9_epitope_Rep4 814.4225047136199 814.4219549679301 79.514 1 -0.13783087477544495 0.03332749664390358 0.4303665370150972 ['ENSG00000163807|ENST00000296121|KIAA1143'] 161 13064 AADPVSPLL True NCI_RA007_Epitope_Rep3 881.4858332461699 881.48472993586 58.667 2 -0.13789752394811686 0.03334565475379857 0.43059208835873364 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 24702 21966 FALVGSYTL True PC9_epitope_Rep5 969.51713337445 969.51602993586 89.526 2 -0.13790351406283008 0.03334565475379857 0.4306123594997394 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 128637 10133 VPVDTGVAA True PC9_epitope_Rep5 827.4388830537498 827.43778993586 43.961 2 -0.1379852480424564 0.03338066800241212 0.43088894943932154 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 96914 14875 SAVMALQEA True PC9_epitope_Rep5 918.44806783846 918.44696993586 62.22 2 -0.13803215797285104 0.03338066800241212 0.43104768881651156 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 9720 16883 AYGNVFSAF True NCI_RA007_Epitope_Rep5 974.4497820906199 974.44923496793 71.697 1 -0.13805461633447438 0.03338066800241212 0.4311236847537259 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 22307 9962 ETDKNGFLQY True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 43.353 2 -0.13806201677751923 0.03338066800241212 0.4311487266227089 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 72958 22759 MQDPMEIFV True PC9_epitope_Rep2 1108.49330377872 1108.49220993586 93.035 2 -0.1380789364837569 0.03338066800241212 0.4312059797413696 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF'] 142123 21253 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58977496793 89.916 1 -0.13810274736252598 0.03338066800241212 0.43128655045870007 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 7809 11597 ASVFGTMPLK True NCI_RA007_Epitope_Rep1 1049.5579526406098 1049.55684993586 49.08 2 -0.1381414914317141 0.03339882121807466 0.43141764965778545 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 28575 23664 FSFMAFFFTF True PC9_epitope_Rep3 1290.5783537320197 1290.5772499358602 96.309 2 -0.13815439096116286 0.03339882121807466 0.4314612975077379 ['nc|ENSG00000198794|Q8TAC9-3|SCAMP5', 'ENSG00000198794|ENST00000425597|SCAMP5', 'nc|ENSG00000198794|Q8TAC9-2|SCAMP5'] 100265 16832 SIYLRVHRDEK True PC9_epitope_Rep3 1414.7680965192196 1414.76644490379 69.897 3 -0.13831156050690285 0.03347597743629644 0.4319930846679828 ['ENSG00000197779|ENST00000338637|ZNF81'] 103921 12198 SQANIAQVL True NCI_RA007_Epitope_Rep2 942.5134449763399 942.51234993586 52.045 2 -0.1383657516222958 0.03348565872630044 0.4321764312247322 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 4104 18813 AHSDTLFTI True PC9_epitope_Rep1 1003.4974605590301 1003.49636993586 77.151 2 -0.13839077659792587 0.03348565872630044 0.43226109718658823 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 64589 8756 LPSQPPPAA True PC9_epitope_Rep1 876.4705175351999 876.46942993586 38.519 2 -0.13841885885266683 0.03348565872630044 0.43235610530979596 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD'] 37760 19730 GYADIVQLL True NCI_RA007_Epitope_Rep1 990.5385970950199 990.5380449679301 80.932 1 -0.13846292062979074 0.03348565872630044 0.43250517247073084 ['ENSG00000134996|ENST00000346234|OSTF1'] 106435 5883 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 30.118 3 -0.13856762504041642 0.03348565872630044 0.4328593871348062 ['ENSG00000058729|ENST00000283109|RIOK2'] 84385 12618 QAAHLIQAL True PC9_epitope_Rep2 963.55016483823 963.54906993586 53.845 2 -0.13859525362161554 0.03348565872630044 0.43295285095316716 ['ENSG00000136463|ENST00000258975|TACO1'] 9584 14466 AYAENIALL True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 64.205 2 -0.1386060008899128 0.03348565872630044 0.43298920712508804 ['ENSG00000196455|ENST00000356763|PIK3R4'] 94746 10513 RSHLLVLV True NCI_RA007_Epitope_Rep2 935.59163572739 935.59052993586 45.489 2 -0.13865047582588785 0.03348565872630044 0.43313965578385183 ['ENST00000272793.9_1_2:170734066-170735040:+|nuORF'] 134466 13765 VYPQPGMQRF True PC9_epitope_Rep1 1221.5964634076497 1221.5953699358602 57.792 2 -0.13868427333667224 0.03348565872630044 0.43325398246890157 ['ENSG00000151929|ENST00000369085|BAG3'] 36544 14693 GVGTSLLSTL True PC9_epitope_Rep5 946.53351171458 946.53240993586 61.52 2 -0.13870571469277707 0.03348565872630044 0.43332651084678725 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3'] 38461 6928 HEPEPHIL True PC9_epitope_Rep4 970.4872302285 970.48612993586 33.877 2 -0.13875320614980516 0.03348565872630044 0.4334871539822838 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 63423 20377 LLVPLDLKV True PC9_epitope_Rep4 1008.6583183048799 1008.65722993586 86.526 2 -0.13877993155406826 0.03348565872630044 0.43357755246843166 ['CON__Q0VBK2'] 103667 6474 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 30.317 2 -0.13882691256617102 0.03348565872630044 0.43373646180393877 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 37834 18545 GYISSAFLF True NCI_RA007_Epitope_Rep3 1003.5014833103099 1003.50097496793 81.147 1 -0.13887548271779543 0.03348565872630044 0.4339007414028084 ['ENSG00000131471|ENST00000308423|AOC3', 'nc|ENSG00000131471|Q16853-2|AOC3'] 74166 7237 NEDYTMSSP True H1975_Epitope_Rep3 1042.3913408079802 1042.39024993586 32.81 2 -0.13888079318831037 0.03348565872630044 0.4339187027894723 ['nc|ENSG00000083642|Q9NTI5-2|PDS5B', 'ENSG00000083642|ENST00000315596|PDS5B'] 122393 7599 VGDPHTVTV True PC9_epitope_Rep3 923.47124581119 923.47014993586 34.228 2 -0.13889102009917614 0.03349989306476387 0.43395329268190713 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 33026 20519 GIIDAFHQI True PC9_epitope_Rep1 1012.5341804209202 1012.53308993586 83.738 2 -0.13890161816528476 0.03349989306476387 0.4339891376764057 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 81403 12854 PLEDYSGECFR True PC9_epitope_Rep5 1314.55505208814 1314.5533949037901 54.453 3 -0.1389461447212987 0.03349989306476387 0.43413973367239994 ['ENSG00000150990|ENST00000308736|DHX37'] 71304 20768 LYQEIIHYF True PC9_epitope_Rep2 1224.61791004488 1224.6168099358601 85.327 2 -0.138950721710006 0.03349989306476387 0.4341552135450377 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 75985 12054 NLVMTPQG True PC9_epitope_Rep1 858.4269384710599 858.4263849679301 51.224 1 -0.139041148657885 0.03349989306476387 0.4344610379652635 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 121281 20463 VETLPAWNL True PC9_epitope_Rep1 1041.54949613189 1041.54838993586 83.523 2 -0.13907767061834428 0.03349989306476387 0.43458455034308435 ['ENST00000382349.4_1_19:1776116-1776464:+|nuORF'] 43744 9098 IHGVAAFK True PC9_epitope_Rep5 841.48102264925 841.47992993586 39.941 2 -0.13909998009610897 0.03349989306476387 0.43465999655203535 ['PARD3B|p.G536V|1|0.27|ENSG00000116117|chr2:205158894-205158894|G/T|missense_variant'] 125392 8498 VISFAQKVTN True H1975_Epitope_Rep3 1105.6131590176099 1105.61206993586 37.673 2 -0.13914279494611 0.03349989306476387 0.43480478472735296 ['nc|ENSG00000106327|Q9UP52-2|TFR2', 'ENST00000476304.5_1_7:100218482-100231271:-|nuORF', 'nc|ENSG00000106327|Q9UP52-3|TFR2', 'ENSG00000106327|ENST00000223051|TFR2'] 14652 11880 DVEGQDVVE True PC9_epitope_Rep3 988.4349198721198 988.43382993586 50.713 2 -0.1391798878301581 0.03351868413889645 0.43493021943186155 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF', 'ENST00000555808.1_1_12:56815681-56815917:-|nuORF'] 41239 9740 HVLGPDLKSV True PC9_epitope_Rep4 1063.60259433391 1063.6014899358602 45.102 2 -0.13920892994524872 0.03353617046095223 0.43502842716982637 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 8465 8936 ATQMVRMILK True NCI_RA007_Epitope_Rep4 1189.6675201729297 1189.6658849037901 41.206 3 -0.13924687943101327 0.03353617046095223 0.43515675283344935 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 60765 6915 LHSEVLSP True H1975_Epitope_Rep2 880.46543215476 880.46432993586 31.519 2 -0.13928923598625642 0.03353617046095223 0.4352999770200077 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 125799 17480 VKVNLVYL True PC9_epitope_Rep4 946.5851533646198 946.58404993586 75.237 2 -0.13932231346043103 0.03355365474339036 0.4354118220806166 ['nc|nan|Q8N4C9-2|C17orf78', 'ENSG00000278505|ENST00000615133|C17orf78'] 44888 20824 INLEELETL True PC9_epitope_Rep4 1072.56520576568 1072.5641099358602 88.25 2 -0.13933645122222163 0.03355365474339036 0.435459625398017 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant'] 103347 11524 SPNGQFVAP True PC9_epitope_Rep4 915.4450310633499 915.4444849679301 52.089 1 -0.13934313940325002 0.03355365474339036 0.4354822396514633 ['ENSG00000121741|ENST00000610343|ZMYM2'] 57986 5336 LEHERQGR True NCI_RA007_Epitope_Rep2 1023.52098996827 1023.5198899358601 25.375 2 -0.1394147752404187 0.03356852683344024 0.4357244499955223 ['ENSG00000105321|ENST00000221922|CCDC9', 'chr19:47272161-47273357|537|39.19|0.0|21.9|+|ENST00000643617|CCDC9,CCDC9'] 83205 6452 PSTSVPAP True H1975_Epitope_Rep3 754.3861192049 754.3855749679301 29.791 1 -0.13941998191744598 0.03356852683344024 0.4357420539911414 ['ENSG00000153201|ENST00000283195|RANBP2'] 4770 16655 ALDSTNVEL True PC9_epitope_Rep2 960.47639076128 960.47584496793 69.306 1 -0.13942792250881017 0.03356852683344024 0.4357689013421282 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 85226 12686 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 54.007 2 -0.1395275402044721 0.03356852683344024 0.43610569851355996 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 69996 10183 LVLVGDGG True NCI_RA007_Epitope_Rep4 728.40685464948 728.40630496793 46.025 1 -0.13953080391864664 0.03356852683344024 0.436116732387408 ['ENSG00000132341|ENST00000543796|RAN'] 9486 20858 AVVPGLLEV True PC9_epitope_Rep4 895.5378688190299 895.5373249679301 88.384 1 -0.13953683481511603 0.03356852683344024 0.43613712140540556 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 31076 7858 GATTTTTAV True PC9_epitope_Rep5 821.41306222873 821.41196993586 35.169 2 -0.13954060206923896 0.03356852683344024 0.43614985754504093 ['ENSG00000178828|ENST00000375121|RNF186'] 112918 21676 TLLEQQGLI True PC9_epitope_Rep1 1013.57571087973 1013.5746099358599 88.207 2 -0.13960513992554574 0.033584700303195214 0.43636803839721666 ['ENSG00000100889|ENST00000216780|PCK2', 'ENST00000558674.5_1_14:24566116-24567637:+|nuORF', 'ENST00000561050.5_1_14:24566116-24568822:+|nuORF', 'nc|ENSG00000100889|Q16822-2|PCK2'] 133616 16062 VYADQPHIF True PC9_epitope_Rep3 1088.52909504048 1088.5279899358602 66.933 2 -0.13963215956889963 0.033584700303195214 0.43645937968794957 ['ENSG00000100439|ENST00000428304|ABHD4'] 27169 19931 FLLFPDMEA True NCI_RA007_Epitope_Rep3 1081.5154191222898 1081.5143299358601 86.867 2 -0.13964345831476016 0.033584700303195214 0.43649757513822385 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 98522 17091 SFMALSQDIQK True PC9_epitope_Rep5 1266.62782310558 1266.62672993586 70.762 2 -0.13973232132306543 0.033584700303195214 0.4367979656595204 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 89252 16627 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48561496793 76.42 1 -0.13975537877627414 0.033584700303195214 0.4368759052861911 ['ENSG00000167658|ENST00000309311|EEF2'] 114300 10597 TPQEDYVEA True PC9_epitope_Rep2 1050.4505699362599 1050.4494699358602 46.077 2 -0.13979405091302138 0.033622918002837544 0.43700662316777505 ['ENSG00000140829|ENST00000268482|DHX38'] 59872 13101 LGGALSWE True H1975_Epitope_Rep1 831.41266830591 831.41211496793 55.482 1 -0.13981759100320973 0.033641045573802354 0.4370861904759248 ['ENST00000371717.7_1_9:139317959-139318130:+|nuORF'] 103593 9980 SPSRAQLPSL True NCI_RA007_Epitope_Rep4 1054.5771078620598 1054.5760099358602 45.231 2 -0.1398430650951732 0.033641045573802354 0.4371722932419557 ['ENST00000389851.8_2_4:1341218-1341545:+|nuORF'] 14429 7846 DTDYRSLP True H1975_Epitope_Rep2 965.4454249861699 965.44432993586 35.129 2 -0.139932772673574 0.03365720948309366 0.4374754925429862 ['nc|ENSG00000160185|P57075-3|UBASH3A'] 104132 3902 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 21.676 2 -0.1399429028529012 0.03365720948309366 0.4375097298271996 ['ENSG00000168090|ENST00000303904|COPS6', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 113125 22048 TLPDLVPQL True PC9_epitope_Rep2 994.5698972232999 994.56880993586 90.28 2 -0.13995742364416144 0.03365720948309366 0.4375588057254147 ['ENSG00000163811|ENST00000407426|WDR43'] 30149 19308 FYPPHPDYTW True PC9_epitope_Rep2 1321.5767735088898 1321.57566993586 79.643 2 -0.13997893070140896 0.03365720948309366 0.4376314920668232 ['ENSG00000130309|ENST00000252599|COLGALT1'] 44799 19872 IMPKTGFLI True PC9_epitope_Rep3 1018.5885244928999 1018.58742993586 81.674 2 -0.1400122895696178 0.03365720948309366 0.4377442309453324 ['ENSG00000198681|ENST00000356661|MAGEA1', 'MAGEA1|p.Q187E|1|0.18|ENSG00000198681|chrX:153182948-153182948|C/G|missense_variant', 'ENSG00000197172|ENST00000329342|MAGEA6'] 142311 15736 YYDPKHVIF True PC9_epitope_Rep3 1180.59169529704 1180.5900449037902 65.689 3 -0.1400544639852913 0.03367598764112629 0.43788675836922963 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 142660 15504 YYPEYKLLF True NCI_RA007_Epitope_Rep4 1234.62741209942 1234.62630993586 67.334 2 -0.1400845450059005 0.03369476506937157 0.43798841351592976 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 21954 8510 ESEEGEEDAT True H1975_Epitope_Rep2 1094.3887575253398 1094.38766993586 37.689 2 -0.14018116122071692 0.03377183607640441 0.43831489952491204 ['ENSG00000089199|ENST00000378961|CHGB'] 96475 6089 SAAPGAEAKY True H1975_Epitope_Rep3 963.46616043075 963.46506993586 28.434 2 -0.14019549918874608 0.033789954337899546 0.43836334826770934 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 116611 7142 TVAEKVDAV True PC9_epitope_Rep5 930.5022115862998 930.50110993586 32.44 2 -0.1402010950878055 0.033789954337899546 0.4383822569480818 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3', 'nc|ENSG00000185515|P46736|BRCC3', 'nc|ENSG00000185515|P46736-5|BRCC3'] 118963 16245 VADVLGTAL True PC9_epitope_Rep1 857.48583324617 857.48472993586 67.305 2 -0.1402835286211592 0.03380347359832148 0.43866079174961775 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 677 19641 AATSVTFVGV True PC9_epitope_Rep1 950.5072969667399 950.5067449679301 80.375 1 -0.14028377699810812 0.03380347359832148 0.43866163096207333 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF'] 47842 5709 IYHHTGNNTF True PC9_epitope_Rep1 1202.5468703629401 1202.54521490379 26.78 3 -0.14030858075604594 0.03380347359832148 0.43874543666415317 ['nc|ENSG00000154380|Q8N8S7|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7-3|ENAH'] 93229 18659 RPRKAFLLLL True PC9_epitope_Rep2 1225.8022971999699 1225.80064490379 77.136 3 -0.14033451378955059 0.03380347359832148 0.4388330560420331 ['ENSG00000155660|ENST00000652332|PDIA4'] 14654 13402 DVERATLTL True PC9_epitope_Rep2 1016.5502244078799 1016.54912993586 56.831 2 -0.14036068385115982 0.03380347359832148 0.4389214743209457 ['nc|ENSG00000105137|Q6ZW31-2|SYDE1', 'ENSG00000105137|ENST00000342784|SYDE1'] 99473 19997 SICNGVPMV True PC9_epitope_Rep3 918.43030959934 918.42920993586 82.164 2 -0.1403791175073975 0.03380347359832148 0.4389837531734622 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 34591 14852 GPTLQTTSV True PC9_epitope_Rep4 902.47091145802 902.46980993586 65.067 2 -0.1404361153365798 0.03380347359832148 0.43917631646176225 ['ENSG00000162745|ENST00000294794|OLFML2B'] 24 9067 AAAAEVLGL True H1975_Epitope_Rep2 813.4596184983299 813.4590749679301 39.829 1 -0.14046010616585494 0.03380347359832148 0.43925736503699575 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 96098 9592 RYMNHMQSL True PC9_epitope_Rep5 1178.5324832521 1178.53138993586 41.856 2 -0.1404758266362787 0.03380347359832148 0.43931047282827707 ['ENSG00000166233|ENST00000379887|ARIH1'] 1869 11547 AEIEDPPIP True NCI_RA007_Epitope_Rep3 979.4862271689899 979.48512993586 52.551 2 -0.1405290162775993 0.03382224380767363 0.439490155755635 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 106881 17611 SVDETLRLVQA True PC9_epitope_Rep1 1229.66156576201 1229.6604699358602 72.533 2 -0.14059350523117956 0.033839698511985705 0.4397079983496732 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF', 'ENSG00000123131|ENST00000379341|PRDX4'] 138605 8020 YIDQEELNK True PC9_epitope_Rep3 1150.5506183307 1150.5495299358602 35.825 2 -0.14059590255361404 0.033839698511985705 0.43971609622651964 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 46119 11417 ISIRWFFK True NCI_RA007_Epitope_Rep1 1095.62293585567 1095.6218299358602 48.375 2 -0.14063765467442474 0.033839698511985705 0.43985712729292065 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF'] 66374 15121 LSGGYWNSV True PC9_epitope_Rep5 981.45559574705 981.45448993586 63.169 2 -0.14065168186438792 0.0338778919559432 0.4399045074169352 ['ENSG00000177189|ENST00000379565|RPS6KA3'] 48220 16069 IYPWVHVVI True NCI_RA007_Epitope_Rep4 1124.6382515666398 1124.6371499358602 69.699 2 -0.1406991880973233 0.03389534206130298 0.4400649664600296 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 35118 17508 GQVVHLTLV True PC9_epitope_Rep3 964.57056592964 964.56946993586 72.523 2 -0.14070680319602494 0.03389534206130298 0.4400906869021806 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ'] 96892 13145 SATSLLHTV True PC9_epitope_Rep1 927.5025459394701 927.50144993586 55.427 2 -0.1407070838449843 0.03389534206130298 0.4400916348071293 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 96273 6438 RYQRYQHRWSP True H1975_Epitope_Rep1 1575.78072689159 1575.7790849037901 29.825 3 -0.14076976194499083 0.03391344883847409 0.44030332700807756 ['ENST00000599581.5_1_19:52786637-52794448:+|nuORF'] 103337 13690 SPMPGTLTA True PC9_epitope_Rep5 873.4266041178901 873.4260549679301 57.685 1 -0.14079124209516938 0.03391344883847409 0.4403758723955162 ['ENSG00000113456|ENST00000382038|RAD1'] 69638 9708 LVDQNDNSP True NCI_RA007_Epitope_Rep1 1000.44615326216 1000.44504993586 41.762 2 -0.14084910865756645 0.03393155420891116 0.4405712993457032 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 85687 12212 QGTLSVVTV True PC9_epitope_Rep6 902.50729696674 902.5067449679301 58.339 1 -0.1408703122530239 0.03393155420891116 0.4406429055295667 ['CON__Q2UVX4'] 98988 8778 SHDFYSHEL True PC9_epitope_Rep4 1133.4777877436102 1133.47615490379 41.277 3 -0.14093801780862372 0.03396776073023888 0.44087154303516846 ['ENSG00000095015|ENST00000399503|MAP3K1'] 44812 19023 INAAATEVVNI True PC9_epitope_Rep2 1113.60298825673 1113.60188993586 78.537 2 -0.1409896525447812 0.03396776073023888 0.4410459006762243 ['nc|ENSG00000089060|Q6J4K2-2|SLC8B1', 'SLC8B1|p.G557Mfs*10|1|0.56|ENSG00000089060|chr12:113299863-113299864|-/AT|frameshift_variant', 'ENSG00000089060|ENST00000680972|SLC8B1'] 69958 21757 LVLFYPTFEI True PC9_epitope_Rep5 1240.67436229184 1240.6732699358602 88.717 2 -0.14099066649708794 0.03396776073023888 0.4410493244560583 ['ENST00000327892.12_1_6:30692959-30693124:+|nuORF'] 95569 17543 RWSPVRPLVF True PC9_epitope_Rep6 1255.71896149883 1255.71786993586 80.119 2 -0.14099538244077048 0.03396776073023888 0.4410652485870674 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 64696 20623 LPVSPSLLPV True PC9_epitope_Rep1 1020.62193279616 1020.62082993586 84.145 2 -0.14101187311323926 0.03398652191645142 0.44112093139934777 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 130666 7538 VSTGDVNVE True PC9_epitope_Rep6 918.42944056886 918.42834993586 38.256 2 -0.14110787148974172 0.0340046219874546 0.4414450646158493 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'KRT10|p.R295Q|1|0.08|ENSG00000186395|chr17:40820407-40820407|C/T|missense_variant'] 138683 19902 YILLEDPQL True PC9_epitope_Rep6 1102.5910265907 1102.58992993586 89.208 2 -0.14111674839353286 0.0340046219874546 0.4414750354925357 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 67278 13018 LSRRTTPFVP True PC9_epitope_Rep2 1172.6665915728 1172.66548993586 55.358 2 -0.14114329114612686 0.0340233813648192 0.4415646496256547 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2'] 99969 20147 SIPEGALVAV True PC9_epitope_Rep1 954.5385970950199 954.5380449679301 82.325 1 -0.1413919659055824 0.03407965512554129 0.44240411739394864 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 14335 2754 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 15.4 2 -0.1414518593140364 0.03407965512554129 0.4426062726028602 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 46211 11551 ISNEFKVEV True PC9_epitope_Rep3 1063.5549754351498 1063.5538699358601 49.443 2 -0.14145428196138055 0.03407965512554129 0.4426144493860915 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 75331 22741 NIPPYFVAL True PC9_epitope_Rep1 1032.56441792004 1032.56387496793 92.278 1 -0.14164217891931313 0.03413592233009709 0.44324856713643723 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 106429 9365 STIKTLEEA True PC9_epitope_Rep5 990.5233409536999 990.52224993586 40.977 2 -0.1416762619833588 0.03413592233009709 0.4433635780668582 ['ENSG00000181789|ENST00000314797|COPG1'] 118395 9708 TYPDVNNSI True NCI_RA007_Epitope_Rep4 1021.4716397340101 1021.47054993586 44.187 2 -0.1416948151462748 0.03413592233009709 0.4434261827075476 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 40740 3826 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 20.887 3 -0.1417428821058473 0.03417143966605184 0.44358837121047284 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 21140 4407 ERAPPQTHL True PC9_epitope_Rep5 1047.5461420869499 1047.54504993586 22.022 2 -0.14174421249852528 0.03417143966605184 0.4435928601316988 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 30397 5813 GAEIENDVP True H1975_Epitope_Rep3 942.4294405688598 942.42834993586 27.382 2 -0.14176623411480563 0.03417143966605184 0.4436671630687563 ['ENSG00000198932|ENST00000537097|GPRASP1'] 708 13659 AAVDYLLY True H1975_Epitope_Rep2 926.4749342093 926.4743849679301 57.678 1 -0.14179625195614434 0.03417143966605184 0.4437684432101877 ['DCSTAMP|p.P332Qfs*7|1|0.12|ENSG00000164935|chr8:104349546-104349546|C/-|frameshift_variant', 'ENSG00000164935|ENST00000297581|DCSTAMP'] 103345 11458 SPNGQFVAP True PC9_epitope_Rep4 915.4450310633499 915.44392993586 51.837 2 -0.14187970525349317 0.03417143966605184 0.44404999748165747 ['ENSG00000121741|ENST00000610343|ZMYM2'] 40081 13864 HPVHPFLAV True PC9_epitope_Rep1 1015.56033559911 1015.55922993586 58.168 2 -0.14195466000759377 0.034188200120367315 0.44430285791064 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 134401 19830 VYPGLAVFF True NCI_RA007_Epitope_Rep3 1011.5429541994698 1011.54184993586 86.412 2 -0.14198015909211828 0.034188200120367315 0.44438887458590604 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 83601 17359 PVCPPGGIQEV True PC9_epitope_Rep3 1094.5430308524599 1094.54192993586 71.944 2 -0.1419851148015409 0.034188200120367315 0.44440559152269227 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 9599 12293 AYAGSGNVL True PC9_epitope_Rep3 850.41848196234 850.41793496793 52.311 1 -0.14199041465922946 0.034188200120367315 0.4444234692639332 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 141001 19264 YSIKYNNQL True PC9_epitope_Rep5 1141.57677350889 1141.57566993586 79.141 2 -0.14206438572454602 0.03420562199099239 0.4446729812856841 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 5255 13719 ALPRGFLSP True PC9_epitope_Rep2 956.5443511817999 956.54324993586 58.061 2 -0.1421375046131493 0.03420562199099239 0.4449195988388633 ['nc|ENSG00000167566|Q9HCH0-4|NCKAP5L', 'ENST00000491441.1_1_12:50196735-50197827:-|nuORF'] 118015 15870 TYDYNFHSF True PC9_epitope_Rep6 1192.48253877088 1192.4814499358602 73.32 2 -0.14217726737281658 0.03420562199099239 0.445053703439493 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 61276 21476 LIPEYLNFI True PC9_epitope_Rep6 1120.61684741572 1120.61574993586 95.484 2 -0.1422298199173159 0.03422304183247598 0.4452309339382279 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 107339 22970 SVLGALIGV True PC9_epitope_Rep5 827.5116540711899 827.51054993586 93.344 2 -0.14225880316233303 0.03422304183247598 0.44532867381426705 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 40808 15786 HSAEQILEF True PC9_epitope_Rep4 1072.5189242795998 1072.51837496793 68.645 1 -0.14228381297597922 0.03422304183247598 0.4454130115558084 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000418559.5_1_2:183617332-183641856:+|nuORF', 'ENST00000491074.5_1_2:183616895-183641856:+|nuORF'] 130915 11529 VTDELPLP True H1975_Epitope_Rep3 882.4698488288599 882.46930496793 49.472 1 -0.14229009511058832 0.03423979502707739 0.4454341957057159 ['WWTR1|p.F360Sfs*12|1|0.21|ENSG00000018408|chr3:149520929-149520929|A/-|frameshift_variant', 'ENSG00000018408|ENST00000360632|WWTR1'] 107832 18812 SVVDGTPLV True PC9_epitope_Rep5 885.48074786573 885.47964993586 77.373 2 -0.14229102416324219 0.03423979502707739 0.44543732857556045 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 121101 9975 VERGQTKTI True PC9_epitope_Rep5 1030.5771078620598 1030.5760099358602 43.344 2 -0.14230474437932963 0.03423979502707739 0.4454835942991085 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000412120.2_1_1:1853728-1858343:-|nuORF', 'ENST00000464311.5_1_1:1853728-1858229:-|nuORF'] 33427 8330 GLAEVAAAV True NCI_RA007_Epitope_Rep4 799.4439684341899 799.44341496793 38.854 1 -0.1423363172695859 0.03423979502707739 0.44559005799548734 ['ENSG00000170684|ENST00000303809|ZNF296'] 56794 6518 LDMEHNNSGP True H1975_Epitope_Rep3 1112.45567240004 1112.45456993586 30.042 2 -0.14234134715400595 0.03425721051201429 0.44560701839701244 ['ENST00000545914.5_1_12:13132494-13132551:+|nuORF'] 48781 16802 KDLNFQGKTI True PC9_epitope_Rep1 1162.63462273818 1162.63352993586 69.453 2 -0.1423420109109344 0.03425721051201429 0.44560925652942723 ['nc|ENSG00000167103|Q5T9C9-2|PIP5KL1', 'ENST00000464759.5_1_9:130684128-130689655:-|nuORF', 'ENST00000498783.5_1_9:130687427-130690958:-|nuORF', 'ENSG00000167103|ENST00000388747|PIP5KL1'] 33355 7293 GKTTVSMAL True NCI_RA007_Epitope_Rep3 906.48445334718 906.48334993586 35.796 2 -0.14238876445709747 0.03425721051201429 0.44576690126105695 ['ENSG00000138801|ENST00000265174|PAPSS1'] 8926 11981 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6965849037902 53.878 3 -0.14247084463698478 0.034271963360437814 0.44604364062990853 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 102393 21232 SLTGVPILVV True PC9_epitope_Rep1 996.6219327961599 996.62082993586 86.493 2 -0.14248531921869156 0.034271963360437814 0.4460924400139449 ['ENSG00000250510|ENST00000311268|GPR162'] 56610 6948 LDHVIVTD True NCI_RA007_Epitope_Rep2 910.47599683846 910.47488993586 31.646 2 -0.14253179995210266 0.034271963360437814 0.4462491388734845 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1'] 6197 13575 APNTPAWEA True PC9_epitope_Rep5 955.43994568291 955.43884993586 57.24 2 -0.14254101350347378 0.034271963360437814 0.4462801991817334 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF'] 89477 20605 QYGEVANLL True PC9_epitope_Rep3 1005.5131106231698 1005.51200993586 84.525 2 -0.1425595545461124 0.034271963360437814 0.4463427028881542 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 65906 8073 LSDPQVHTV True PC9_epitope_Rep3 994.5083595959 994.50726993586 36.028 2 -0.14256921679846862 0.034271963360437814 0.4463752747652753 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 70638 26181 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 108.29 3 -0.14257763081206784 0.034271963360437814 0.4464036384725551 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 89533 11135 QYLPHVARL True PC9_epitope_Rep4 1095.61891310439 1095.6178099358601 50.607 2 -0.1425874684127497 0.03429003900564709 0.4464368007461643 ['ENSG00000148248|ENST00000371989|SURF4', 'ENST00000467910.5_1_9:136231851-136242840:-|nuORF', 'nc|ENSG00000148248|O15260-3|SURF4', 'nc|ENSG00000148248|O15260-2|SURF4'] 84242 20099 PYMDSPQSIGF True PC9_epitope_Rep4 1240.5434247752798 1240.54287496793 85.444 1 -0.1426152889069985 0.03429003900564709 0.44653058075733887 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 22066 15710 ESLSYLSIL True H1975_Epitope_Rep3 1023.5488274255499 1023.54772993586 65.865 2 -0.1426262870123044 0.034308779011099896 0.4465676533811815 ['ENST00000532378.5_1_11:14901840-14912470:-|nuORF'] 140643 12870 YRSEEACML True PC9_epitope_Rep5 1100.4630662795998 1100.46196993586 54.513 2 -0.1427034011755124 0.03434359113663704 0.4468275776419738 ['SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion', 'nc|ENSG00000167642|O43291-2|SPINT2', 'ENSG00000167642|ENST00000301244|SPINT2', 'ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 63680 23553 LMTFFLAL True PC9_epitope_Rep4 954.5248616071799 954.52376993586 98.904 2 -0.14274381871187483 0.03434359113663704 0.44696380111458944 ['ENSG00000174669|ENST00000357440|SLC29A2'] 110991 4747 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 25.691 2 -0.1427483256251162 0.03434359113663704 0.44697899082753406 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 64919 5392 LQEELSQAKC True NCI_RA007_Epitope_Rep2 1147.55432381215 1147.5532299358601 25.593 2 -0.14276961188106657 0.03434359113663704 0.4470507310780493 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 120337 7208 VEEDSRVFSA True H1975_Epitope_Rep2 1137.5302172392899 1137.52912993586 32.66 2 -0.14279417980365228 0.03434359113663704 0.4471335291075619 ['ENSG00000115760|ENST00000421745|BIRC6'] 102981 16961 SPFGSITSA True PC9_epitope_Rep1 865.4181476091701 865.41704993586 70.063 2 -0.14281573244113657 0.03434359113663704 0.4472061630877799 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 33469 18005 GLASLQIP True PC9_epitope_Rep6 797.46470387877 797.4641549679301 81.884 1 -0.142882626976852 0.03440113312248976 0.4474315904648712 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1'] 32483 16083 GGDDSFNTF True PC9_epitope_Rep4 958.3668403123 958.36574993586 69.797 2 -0.14290919642314895 0.03441920024834598 0.4475211215124584 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 55364 8802 LAENTRYFRRR True NCI_RA007_Epitope_Rep1 1480.801127983 1480.79947490379 38.239 3 -0.14292412726676118 0.03441920024834598 0.44757143268329774 ['ENSG00000100596|ENST00000216484|SPTLC2'] 107716 6093 SVSDGIHSV True PC9_epitope_Rep6 899.4348603024702 899.43376993586 31.833 2 -0.1429894841455585 0.034437265972100964 0.44779164917629294 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 14094 12294 DRVSAVAL True PC9_epitope_Rep3 829.4657665079299 829.46521496793 52.315 1 -0.14299270804074926 0.034437265972100964 0.44780251145621813 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 42954 8583 IESPAVAAP True H1975_Epitope_Rep2 853.4545331178899 853.45342993586 37.968 2 -0.1430616396430842 0.03445132005198735 0.4480347524685266 ['ENSG00000106211|ENST00000248553|HSPB1'] 61243 17589 LINFLKEVPA True PC9_epitope_Rep2 1142.66994561774 1142.6688499358602 72.935 2 -0.1430870871819352 0.03445132005198735 0.4481204840183885 ['NPL|p.A132P|1|0.58|ENSG00000135838|chr1:182816743-182816743|G/C|missense_variant'] 86769 21588 QLLNWVYLSL True PC9_epitope_Rep4 1247.69140933831 1247.6903099358601 91.22 2 -0.14313946790868062 0.03445132005198735 0.44829694355233984 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 98262 10374 SEVEVIHVP True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52766993586 46.76 2 -0.1431977862432085 0.03445132005198735 0.44849339185995124 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 4497 10959 AIYGTDDL True H1975_Epitope_Rep3 866.4021631918599 866.4016149679301 47.242 1 -0.14322991922818282 0.03445132005198735 0.4486016272414127 ['ENST00000508252.1_1_5:137463382-137465094:-|nuORF', 'ENSG00000112981|ENST00000265191|NME5'] 103657 6415 SPVASTTPSA True PC9_epitope_Rep5 916.45017601344 916.44906993586 29.652 2 -0.14325524999921524 0.03445132005198735 0.4486869472008352 ['ENSG00000166825|ENST00000300060|ANPEP'] 125152 14824 VIGPPVVL True H1975_Epitope_Rep3 792.5109257952 792.51037496793 62.402 1 -0.14325743199835964 0.03445132005198735 0.44869429655460413 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 62333 5789 LLGGAKPGP True H1975_Epitope_Rep2 808.48068829608 808.47958993586 27.262 2 -0.143264969484253 0.03445132005198735 0.4487196839637443 ['ENSG00000176678|ENST00000320241|FOXL1'] 64467 5540 LPPVGNAK True NCI_RA007_Epitope_Rep3 794.46503823194 794.46394993586 28.789 2 -0.1433063148926273 0.03448810955502968 0.44885893726932496 ['nc|ENSG00000136933|Q7Z6M1-2|RABEPK', 'ENSG00000136933|ENST00000373538|RABEPK'] 28775 14096 FSTALYGESDL True H1975_Epitope_Rep3 1201.55028397753 1201.54977496793 59.547 1 -0.14332963233949286 0.03448810955502968 0.4489374682694001 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 33418 8401 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44286993586 37.267 2 -0.14336092037154038 0.03448810955502968 0.4490428397409333 ['ENSG00000170684|ENST00000303809|ZNF296'] 121343 12808 VEVERTEVLR True PC9_epitope_Rep4 1228.67755017932 1228.67644993586 57.126 2 -0.143438182418791 0.03454362077660111 0.449303023614894 ['ENSG00000100884|ENST00000689861|CPNE6', 'nc|ENSG00000100884|O95741-2|CPNE6'] 118263 15977 TYLEKFQNL True PC9_epitope_Rep6 1154.5971746002997 1154.5960699358602 73.758 2 -0.14346390950412022 0.03454362077660111 0.4493896550567862 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 44992 13438 IPATPGIGA True PC9_epitope_Rep5 795.4490538146299 795.44850496793 56.706 1 -0.1435104165048412 0.03454362077660111 0.44954625178716956 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 35456 5349 GSHSMRYFS True NCI_RA007_Epitope_Rep4 1070.4603638576598 1070.4592699358602 27.141 2 -0.14351690265654526 0.03454362077660111 0.4495680909660151 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G'] 81912 14682 PLSIAVEAA True H1975_Epitope_Rep2 869.4858332461699 869.48528496793 61.636 1 -0.14354573309932284 0.03456234605015613 0.44966516216304264 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000466876.1_1_3:195006441-195012466:-|nuORF'] 112373 15474 TLAQLQQSL True PC9_epitope_Rep1 1000.5553097883201 1000.55420993586 64.342 2 -0.14355655006985338 0.034577046891362526 0.44970158160845014 ['ENSG00000137877|ENST00000320955|SPTBN5'] 129279 14365 VQVPHHLLSSV True PC9_epitope_Rep3 1214.6771562565002 1214.67550490379 60.347 3 -0.14356324218269584 0.034577046891362526 0.44972411289017833 ['ENST00000441339.2_11:69061685-69061946:+|nuORF'] 24700 23631 FALSGPLFL True PC9_epitope_Rep5 963.5429541994699 963.54184993586 95.875 2 -0.1435706275593785 0.034577046891362526 0.44974897804904534 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 105152 13948 SRFPEALRL True PC9_epitope_Rep4 1087.61382772395 1087.6127299358602 61.554 2 -0.1436276104048924 0.034577046891362526 0.4499408202422441 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 3456 8712 AGLAKSIGV True PC9_epitope_Rep6 814.4912529797799 814.49014993586 43.367 2 -0.1436853231114724 0.034577046891362526 0.4501351047497125 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3'] 132041 7804 VTTATTDP True PC9_epitope_Rep3 804.3865131277199 804.38540993586 35.01 2 -0.14369992898794137 0.034577046891362526 0.4501842717006709 ['ENSG00000166987|ENST00000355673|MBD6'] 86391 11123 QKESDHIL True PC9_epitope_Rep6 968.4927095317598 968.49160993586 53.723 2 -0.14370830255007327 0.034577046891362526 0.45021245872203797 ['nc|ENSG00000180881|Q9BXY5|CAPS2', 'ENSG00000180881|ENST00000699294|CAPS2', 'nc|ENSG00000180881|Q9BXY5-5|CAPS2', 'nc|ENSG00000180881|Q9BXY5-3|CAPS2', 'ENST00000409004.5_1_12:75670025-75710066:-|nuORF', 'nc|ENSG00000180881|Q9BXY5-2|CAPS2', 'ENST00000336815.10_1_12:75687137-75710066:-|nuORF'] 67914 10374 LTCVGQGTV True PC9_epitope_Rep1 876.43750315476 876.43640993586 44.788 2 -0.14374555226637822 0.03459509773502947 0.4503378445766942 ['ENST00000546516.5_1_16:705169-713132:+|nuORF', 'WDR90|p.S1458Vfs*13|1|0.09|ENSG00000161996|chr16:665739-665739|A/-|frameshift_variant', 'ENSG00000161996|ENST00000293879|WDR90', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'WDR90|p.R1329Lfs*9|1|0.39|ENSG00000161996|chr16:662009-662019|CGCGTGCCGGC/-|frameshift_variant', 'ENST00000547407.5_1_16:711076-715728:+|nuORF', 'ENST00000549024.5_1_16:711101-717586:+|nuORF'] 77172 7385 NRRFSGQP True H1975_Epitope_Rep2 960.488961564 960.48786993586 33.346 2 -0.14376547818296578 0.03459509773502947 0.45040491439004365 ['nc|ENSG00000120925|Q96K19-4|RNF170', 'nc|ENSG00000120925|Q96K19-6|RNF170', 'nc|ENSG00000120925|Q96K19-2|RNF170', 'ENSG00000120925|ENST00000527424|RNF170', 'ENST00000528318.5_1_8:42716773-42751856:-|nuORF'] 34632 5888 GPYGGAQPSA True PC9_epitope_Rep4 903.40864555463 903.40754993586 29.547 2 -0.1438100134372858 0.034633209874149196 0.450554811663706 ['ENSG00000239306|ENST00000310137|RBM14'] 63952 9449 LNSVVQSV True PC9_epitope_Rep1 844.4654321547599 844.46432993586 41.202 2 -0.14383937563797278 0.03465125748967443 0.45065363432713085 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 79147 15474 PALRGALL True PC9_epitope_Rep5 809.5123227775299 809.51122993586 64.531 2 -0.14391207452809474 0.03465125748967443 0.4508982956983626 ['ENST00000262738.7_1_22:46932303-46932903:-|nuORF'] 33055 12337 GILKNGLI True PC9_epitope_Rep1 826.5276384884999 826.52654993586 52.311 2 -0.14394529015353794 0.034669975955945086 0.451010071665713 ['nc|ENSG00000062194|Q86WP2-4|GPBP1', 'nc|ENSG00000062194|Q86WP2-3|GPBP1', 'ENSG00000062194|ENST00000506184|GPBP1', 'nc|ENSG00000062194|Q86WP2-2|GPBP1'] 135386 3852 WGYRKCQHK True NCI_RA007_Epitope_Rep2 1204.59238108672 1204.59073490379 19.618 3 -0.14399170729290434 0.03468533095505836 0.45116626427217166 ['ENSG00000173705|ENST00000309558|SUSD5'] 108208 13904 SYGTVSQIF True NCI_RA007_Epitope_Rep4 1000.4865615221598 1000.48597496793 60.757 1 -0.143994205229759 0.03468533095505836 0.4511746694872654 ['CLEC5A|p.F148Lfs*19|1|0.17|ENSG00000258227|chr7:141931728-141931728|G/-|frameshift_variant', 'nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 47370 16404 IVIDPKNPL True PC9_epitope_Rep1 1007.60153170475 1007.60042993586 67.922 2 -0.1440003356726572 0.03468533095505836 0.45119529746364323 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 48063 19663 IYMDTLNIF True NCI_RA007_Epitope_Rep5 1128.5525329069999 1128.5514299358601 82.547 2 -0.1440067958781273 0.03468533095505836 0.4512170348490622 ['ENSG00000165678|ENST00000372134|GHITM'] 44216 6820 IKFYRMRHHYK True H1975_Epitope_Rep1 1577.84015634401 1577.83852490379 31.275 3 -0.14409965504850059 0.03468533095505836 0.45152946698287677 ['ENSG00000134758|ENST00000261593|RNF138'] 133978 9371 VYIRGSKIRF True PC9_epitope_Rep2 1237.7295261825295 1237.72789490379 41.379 3 -0.1441488266774339 0.03468533095505836 0.4516948924065505 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 35734 8410 GTGIVSAPVPK True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 42.03 2 -0.14419875117706146 0.03470135509760968 0.45186283892901175 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 70500 11085 LVVSTQTALA True NCI_RA007_Epitope_Rep1 1001.5757108797299 1001.57517496793 47.115 1 -0.14424867630814647 0.03470135509760968 0.4520307756838166 ['CON__P02769'] 62902 9885 LLNQTQVE True PC9_epitope_Rep2 943.4974605590298 943.49636993586 43.356 2 -0.14425456752896312 0.03470135509760968 0.45205059161985234 ['ENST00000486166.1_1_X:16875796-16876897:-|nuORF'] 70366 9810 LVSSVSLPS True NCI_RA007_Epitope_Rep3 887.49639792987 887.4958449679301 45.654 1 -0.1443631143453961 0.03470135509760968 0.4524156739484575 ['ZMYM4|p.A664Ffs*28|1|0.06|ENSG00000146463|chr1:35387155-35387156|-/TTTCCTAGACAATATTGTTTAGT|frameshift_variant'] 56839 15852 LDPAIPIPD True H1975_Epitope_Rep1 949.51204799401 949.51149496793 66.282 1 -0.1443817793054984 0.03470135509760968 0.4524784452407054 ['ENSG00000172037|ENST00000305544|LAMB2'] 57498 4392 LEDKPSPPP True H1975_Epitope_Rep2 978.5022115863 978.50110993586 22.004 2 -0.14439013033920184 0.03471266595600349 0.4525065296805816 ['ENSG00000116903|ENST00000366645|EXOC8'] 701 6199 AAVDAGM[Oxidation]AM True NCI_RA007_Epitope_Rep4 851.35172530591 851.3511749679301 30.454 1 -0.14441792727584643 0.03471266595600349 0.45260000804590533 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 121488 9048 VEYLRNNFR True PC9_epitope_Rep5 1209.62545503681 1209.62380490379 39.748 3 -0.14443105526551936 0.03471266595600349 0.45264415487527115 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG'] 20472 21717 EPIPYEFMA True PC9_epitope_Rep3 1095.49468367771 1095.4935899358602 88.828 2 -0.1444469731791822 0.03471266595600349 0.45269768253760634 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 89986 5182 RDKLKFPTR True NCI_RA007_Epitope_Rep4 1159.6825759901099 1159.68094490379 26.461 3 -0.1444977502086845 0.03471266595600349 0.4528684237403217 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A'] 18839 12099 ELDPNNAVYY True H1975_Epitope_Rep1 1196.53496826656 1196.53437496793 51.552 1 -0.14452196183724952 0.03471266595600349 0.4529498325242526 ['ENSG00000197860|ENST00000381007|SGTB'] 118479 18843 TYPNTYIF True PC9_epitope_Rep6 1017.48074786573 1017.47964993586 85.124 2 -0.14453048480471037 0.03471266595600349 0.45297848932376483 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 89658 10158 QYVDFHNQL True NCI_RA007_Epitope_Rep4 1162.54072235334 1162.5396299358601 45.93 2 -0.14459812751118375 0.03471266595600349 0.45320591187627113 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 9951 20125 AYNDNWFITF True NCI_RA007_Epitope_Rep4 1289.57168812845 1289.5705899358602 87.071 2 -0.144619250318077 0.03471266595600349 0.4532769245344492 ['ENSG00000107929|ENST00000316157|LARP4B'] 118965 13894 VADVLTSLA True NCI_RA007_Epitope_Rep2 887.49639792987 887.4958449679301 58.698 1 -0.14464935863407363 0.03471266595600349 0.45337814169363555 ['nc|ENSG00000068137|Q7Z736-4|PLEKHH3', 'ENST00000456950.6_1_17:40821512-40828020:-|nuORF', 'nc|ENSG00000068137|Q7Z736-2|PLEKHH3', 'ENST00000591490.5_1_17:40821740-40828722:-|nuORF'] 132360 5542 VVAAHLAGA True PC9_epitope_Rep4 807.46028720467 807.45918993586 28.081 2 -0.1446664695687768 0.03471266595600349 0.4534356626641843 ['ENSG00000160161|ENST00000291495|CILP2'] 137445 10762 YEDGNVQLV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 46.425 2 -0.14468726285107014 0.03471266595600349 0.4535055604287359 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 91899 15083 RKLFFRRCLSL True PC9_epitope_Rep5 1437.83909371485 1437.83743490379 63.024 3 -0.14474426034650995 0.03473002829567037 0.45369714954002516 ['ENST00000414441.5_1_7:100031292-100031550:+|nuORF'] 33166 21350 GIVFVVDSV True PC9_epitope_Rep5 933.5171333744499 933.51602993586 87.181 2 -0.14477135515158843 0.03473002829567037 0.45378821920974266 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 33422 8705 GLAEVAAAV True NCI_RA007_Epitope_Rep2 799.4439684341899 799.44341496793 38.508 1 -0.14482814741675498 0.03473002829567037 0.4539790944267291 ['ENSG00000170684|ENST00000303809|ZNF296'] 17116 11598 EGLVQELQKKA True NCI_RA007_Epitope_Rep3 1241.6979512707296 1241.6968499358602 52.746 2 -0.1448757132915379 0.03474738861649968 0.45413894773825275 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 45207 11398 IPRTGVSEYPP True H1975_Epitope_Rep2 1214.6295373577398 1214.62844993586 48.893 2 -0.14489191706608986 0.03474738861649968 0.4541934006815876 ['nc|ENSG00000186628|A1L4K1-2|FSD2', 'ENSG00000186628|ENST00000334574|FSD2'] 116514 18266 TTSDIDYAL True PC9_epitope_Rep3 997.46040634397 997.45985496793 75.468 1 -0.144924347276778 0.03474738861649968 0.4543023786949369 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 87801 18789 QRDSLLWKL True PC9_epitope_Rep3 1157.6556925359298 1157.65405490379 77.494 3 -0.14497115760488918 0.034785473431262356 0.4544596699469305 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 99954 12603 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.55090993586 53.527 2 -0.1450168611785824 0.034804178051663665 0.4546132314291927 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 48206 19066 IYPTTYVQF True PC9_epitope_Rep6 1130.56481184286 1130.56427496793 85.982 1 -0.14512317290882837 0.03483753463408963 0.454970391152401 ['ENSG00000179820|ENST00000391770|MYADM'] 70956 19753 LYGNIIDNL True PC9_epitope_Rep6 1033.54441075145 1033.5433099358602 88.64 2 -0.14513664670617976 0.03483753463408963 0.45501565286969503 ['nc|ENSG00000101365|O43837-3|IDH3B', 'nc|ENSG00000101365|O43837-2|IDH3B', 'ENSG00000101365|ENST00000380843|IDH3B', 'ENST00000492240.5_1_20:2640597-2640995:-|nuORF'] 26922 9562 FLDHKTLYY True H1975_Epitope_Rep2 1198.60225998074 1198.60060490379 41.754 3 -0.1451669898746723 0.03483753463408963 0.45511757937720404 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000444292.2_1_X:95228575-95229244:-|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5', 'nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7'] 33126 20443 GISFADLF True H1975_Epitope_Rep1 868.43306939732 868.43252496793 85.025 1 -0.1451715724398783 0.03483753463408963 0.4551329723694968 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2', 'RIN2|p.P358Tfs*9|1|0.44|ENSG00000132669|chr20:19974942-19974943|-/A|frameshift_variant'] 43874 4550 IHSSSTVL True PC9_epitope_Rep6 842.44978209062 842.44868993586 24.757 2 -0.14521268686954947 0.03483753463408963 0.4552710722083593 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 136652 7206 WWRRRWTRSQW True NCI_RA007_Epitope_Rep1 1702.8705449554998 1702.86944993586 32.02 2 -0.145228600369761 0.03483753463408963 0.4553245219042907 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 76255 4931 NPKDNNQFASA True PC9_epitope_Rep1 1204.54726428576 1204.54616993586 23.83 2 -0.14523771196462246 0.03483753463408963 0.4553551250031434 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 102320 9555 SLSREVAVV True PC9_epitope_Rep3 958.5447451046198 958.54364993586 41.704 2 -0.1452647401251121 0.03483753463408963 0.4554459018656788 ['ENSG00000188112|ENST00000341865|C6orf132'] 101167 18962 SLGSVDLALE True PC9_epitope_Rep3 1002.5233409536999 1002.52224993586 78.162 2 -0.14540235321242956 0.03491233168652524 0.4559080295299724 ['ENST00000560590.5_1_15:77864683-77865123:+|nuORF', 'ENST00000561123.2_1_15:77864683-77901013:+|nuORF'] 118108 19499 TYGPSFPAF True PC9_epitope_Rep6 985.4545331178899 985.4539849679301 87.664 1 -0.14544599862574198 0.03491233168652524 0.45605457698805224 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 101907 17795 SLPTAPLAP True PC9_epitope_Rep1 865.49091862661 865.48982993586 73.244 2 -0.1455188155849577 0.03491233168652524 0.45629905044603036 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 78051 15593 NVTEYVVRV True PC9_epitope_Rep5 1077.5818588893299 1077.5807699358602 64.987 2 -0.14553650994230125 0.03491233168652524 0.45635845262323094 ['ENSG00000125651|ENST00000394456|GTF2F1', 'ENST00000595047.5_1_19:6392384-6393012:-|nuORF'] 96893 12325 SATSLLHTV True PC9_epitope_Rep2 927.5025459394701 927.50144993586 52.721 2 -0.14566102106379503 0.03498915065096094 0.45677640397214453 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 134565 14227 VYSEVAAYEF True NCI_RA007_Epitope_Rep4 1176.5339056373998 1176.5333749679298 62.004 1 -0.14567706854337578 0.03500784625220373 0.4568302650172439 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF'] 112320 16812 TLAAASYEGV True PC9_epitope_Rep2 980.4814761417199 980.48036993586 69.916 2 -0.1457072364987089 0.03506528730287884 0.45693151557278694 ['PPOX|p.G448A|1|0.04|ENSG00000143224|chr1:161171085-161171085|G/C|missense_variant'] 111669 15714 TIELWGYEE True H1975_Epitope_Rep2 1138.51825557326 1138.51714993586 65.612 2 -0.1457330991715506 0.035080582674724935 0.45701831263206016 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 101924 19430 SLPVTIPSA True PC9_epitope_Rep2 883.5014833103099 883.5009349679301 80.116 1 -0.1457411607732951 0.035080582674724935 0.45704536721558514 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 86697 7530 QLIVGVNK True PC9_epitope_Rep6 869.53345214493 869.53234993586 38.225 2 -0.145821711490421 0.035080582674724935 0.45731567417793945 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 48129 19950 IYPDSFTVL True PC9_epitope_Rep6 1053.53826274185 1053.5371699358602 89.397 2 -0.14582251212809236 0.035080582674724935 0.45731836072633114 ['RWDD1|p.T120Dfs*3|1|0.14|ENSG00000111832|chr6:116588928-116588929|-/GATC|frameshift_variant', 'RWDD1|p.K127Sfs*5|1|0.12|ENSG00000111832|chr6:116588949-116588950|-/TCCATACATTTAT|frameshift_variant', 'RWDD1|p.K127Sfs*28|1|0.13|ENSG00000111832|chr6:116588949-116588950|-/TCCAT|frameshift_variant', 'ENSG00000111832|ENST00000466444|RWDD1'] 73689 16326 MYPYIFHVL True NCI_RA007_Epitope_Rep3 1181.59433814933 1181.59324993586 71.92 2 -0.14588420405013405 0.035080582674724935 0.45752535791296106 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 23661 19279 EYAKTFGYTF True PC9_epitope_Rep3 1225.5655401188499 1225.56444993586 79.378 2 -0.14592190128440105 0.035080582674724935 0.4576518343814481 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 113160 17889 TLPPSALAP True PC9_epitope_Rep1 865.49091862661 865.48982993586 73.602 2 -0.14603512908999935 0.035099273607748185 0.45803167243923 ['ENST00000483551.6_1_15:69082366-69082516:-|nuORF'] 75509 16875 NKNTESIIEL True PC9_epitope_Rep5 1159.6084675599898 1159.60736993586 69.92 2 -0.14606796377576056 0.035117963816681516 0.45814180731695325 ['ENSG00000166402|ENST00000299506|TUB', 'nc|ENSG00000166402|P50607-2|TUB'] 29796 16040 FVPLPVSV True H1975_Epitope_Rep1 856.50584041476 856.50529496793 67.035 1 -0.1461494087274195 0.03513529218075113 0.458414965453147 ['CON__P12763'] 1700 17556 AEGLTLAQV True PC9_epitope_Rep5 900.4916469025999 900.49054993586 72.538 2 -0.1461582595298217 0.03513529218075113 0.4584446478714083 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 16820 10905 EEWGWNDIHC True H1975_Epitope_Rep3 1287.49787156519 1287.4967699358601 47.033 2 -0.14616805462492471 0.03513529218075113 0.45847749658669046 ['ENSG00000198178|ENST00000360345|CLEC4C', 'nc|ENSG00000198178|Q8WTT0-2|CLEC4C', 'ENST00000537530.1_1_12:7882194-7883423:-|nuORF'] 90354 4267 REFTDSAEA True NCI_RA007_Epitope_Rep3 1024.4461532621597 1024.4450499358602 23.482 2 -0.14619822947206526 0.03514989542179874 0.45857868714475386 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL'] 81801 17503 PLPPPLPPP True PC9_epitope_Rep4 923.54803957991 923.54694993586 75.329 2 -0.14619928787704134 0.03514989542179874 0.4585822363833145 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 92745 7421 RPAAGFVA True PC9_epitope_Rep1 787.4340724568299 787.43296993586 33.361 2 -0.14626339850183995 0.03514989542179874 0.4587972119339875 ['ENSG00000141526|ENST00000582743|SLC16A3'] 45137 19456 IPNIAPDI True PC9_epitope_Rep1 851.47526856247 851.47416993586 79.654 2 -0.14632613624833612 0.03514989542179874 0.4590075609988241 ['nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 53083 5106 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 24.666 2 -0.14636525802406408 0.03514989542179874 0.45913871815578966 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 82476 5777 PPQPPPPPP True NCI_RA007_Epitope_Rep3 922.4912529797799 922.49014993586 29.704 2 -0.14638103998059462 0.03514989542179874 0.45919162521217477 ['HOXD3|p.S341Tfs*88|1|0.15|ENSG00000128652|chr2:176171993-176171996|GCGA/-|frameshift_variant', 'ENSG00000128652|ENST00000683222|HOXD3', 'ENSG00000077044|ENST00000264057|DGKD', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'DGKD-SAG|2|fusion', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 81456 4132 PLFRPRSEF True NCI_RA007_Epitope_Rep5 1147.61382772395 1147.61218490379 22.391 3 -0.14638404152801288 0.03514989542179874 0.4592016873642977 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 127835 13557 VPFAAPATA True PC9_epitope_Rep4 843.4490538146299 843.44850496793 60.043 1 -0.14643339067734062 0.03518794662741832 0.45936711404408415 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 142372 15487 YYEKLHTYF True PC9_epitope_Rep3 1262.5971746003 1262.59552490379 64.722 3 -0.14650938343988198 0.035225996359270303 0.45962182672412 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 97330 3594 SEAPPTNQA True H1975_Epitope_Rep2 913.41412485789 913.41302993586 18.729 2 -0.146532606941603 0.035244679408973835 0.4596996605252645 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 87376 6407 QPTETPVA True PC9_epitope_Rep5 841.4181476091699 841.41704993586 29.622 2 -0.1466223419677168 0.03525994772001162 0.46000037841736463 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 73443 14341 MVADKFTEL True PC9_epitope_Rep6 1052.52123277872 1052.52012993586 67.06 2 -0.14663510977932787 0.03525994772001162 0.46004316172381443 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 61 13011 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44850496793 55.129 1 -0.14665176851317893 0.03525994772001162 0.46009898155539913 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 75673 14059 NLGPKIIML True NCI_RA007_Epitope_Rep1 997.59942352977 997.59832993586 58.715 2 -0.1466592534488957 0.03525994772001162 0.4601240614257582 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 67766 4725 LSYRHFQFRR True NCI_RA007_Epitope_Rep1 1408.7476358581596 1408.74598490379 22.46 3 -0.14666245833090566 0.03525994772001162 0.4601347999630138 ['ENST00000581475.5_1_18:690653-693903:-|nuORF'] 137440 6047 YEDGGKPPVP True H1975_Epitope_Rep3 1057.50802524273 1057.5069299358602 28.273 2 -0.14666466957999386 0.03525994772001162 0.46014220911761095 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 32654 8073 GGPGGVGGL True NCI_RA007_Epitope_Rep4 669.34458874609 669.34404496793 37.832 1 -0.1467009413208037 0.03527862758006428 0.4602637393982278 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.G136E|1|0.35|ENSG00000172867|chr12:52651736-52651736|C/T|missense_variant'] 139995 20419 YQDPSVLYI True PC9_epitope_Rep4 1096.54407639828 1096.5429699358601 86.688 2 -0.1467396960245944 0.03531188291323034 0.46039358027332566 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 141478 11819 YTIDTENSTV True PC9_epitope_Rep6 1141.51389846881 1141.51280993586 56.664 2 -0.1467754696838047 0.03531188291323034 0.4605134256797464 ['nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A'] 45081 20301 IPIQDVAI True PC9_epitope_Rep6 867.5065686907499 867.50546993586 90.794 2 -0.14680541797790822 0.03531188291323034 0.4606137495972864 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 16785 11269 EEVEELSPQN True H1975_Epitope_Rep1 1172.5197121252397 1172.51860993586 48.322 2 -0.14682113848474695 0.03531188291323034 0.46066640962513705 ['ENST00000442216.1_2_22:38693892-38696026:-|nuORF'] 4496 10783 AIYGTDDL True H1975_Epitope_Rep1 866.4021631918599 866.4016149679301 46.439 1 -0.14682439324225202 0.03531188291323034 0.46067731211646873 ['ENST00000508252.1_1_5:137463382-137465094:-|nuORF', 'ENSG00000112981|ENST00000265191|NME5'] 100745 12786 SLDYYNTCEYP True PC9_epitope_Rep1 1366.53873331766 1366.5376299358602 54.056 2 -0.14682880887354577 0.03531188291323034 0.4606921030951488 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 83912 7096 PVPYRKIA True PC9_epitope_Rep6 942.5650866263799 942.56398993586 36.334 2 -0.1468511644544041 0.03531188291323034 0.4607669854636238 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 103248 14223 SPLHLAVEA True PC9_epitope_Rep3 935.5076313199099 935.50652993586 59.794 2 -0.14686349738149504 0.03531188291323034 0.46080829460469835 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 30138 20163 FYPALADLF True NCI_RA007_Epitope_Rep3 1055.5327834385898 1055.5316899358602 87.862 2 -0.14691512258237124 0.03534923339011925 0.460981203205607 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 68151 20992 LTDQTLIYL True PC9_epitope_Rep4 1078.5910265906998 1078.59047496793 88.906 1 -0.1469206937549185 0.03534923339011925 0.46099986179938185 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 56178 21880 LAWGFSTVL True PC9_epitope_Rep3 992.5331177917599 992.53202993586 89.464 2 -0.14695234327897588 0.035361746603181976 0.46110585665288556 ['ENSG00000160991|ENST00000495936|ORAI2'] 111355 17597 THQPVFIQL True PC9_epitope_Rep4 1081.59202965021 1081.59092993586 75.701 2 -0.14695396549041487 0.035361746603181976 0.46111128930501033 ['ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant'] 48554 14322 KALSIFNEL True NCI_RA007_Epitope_Rep5 1033.58079626017 1033.5796899358602 61.781 2 -0.1469557515519122 0.035361746603181976 0.46111727065886526 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 112590 9882 TLEQEIER True PC9_epitope_Rep1 1016.5138388991599 1016.51274993586 42.868 2 -0.14699571965253733 0.035361746603181976 0.46125111501076127 ['ENST00000560301.5_1_15:41067690-41071423:-|nuORF', 'ENST00000559238.5_1_15:41060140-41072106:-|nuORF', 'ENSG00000104129|ENST00000220496|DNAJC17'] 37752 15564 GWYDEEHPLVF True NCI_RA007_Epitope_Rep3 1390.6193665968601 1390.61826993586 68.785 2 -0.14701891504916262 0.035361746603181976 0.4613287867918172 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 122838 16114 VGGVALSLS True PC9_epitope_Rep6 801.4596184983301 801.4590749679301 74.321 1 -0.1470207261041678 0.035361746603181976 0.46133485112641975 ['ENSG00000108733|ENST00000225873|PEX12'] 3889 7941 AHATPLPVT True PC9_epitope_Rep2 905.4970666362101 905.49596993586 35.911 2 -0.14702268734732 0.035361746603181976 0.4613414183447309 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 122753 16794 VGGLGVAVV True PC9_epitope_Rep3 769.46978925921 769.4692449679301 69.746 1 -0.14702723495445222 0.035361746603181976 0.4613566459061902 ['nc|ENSG00000157593|Q8TB61-5|SLC35B2', 'nc|ENSG00000157593|Q8TB61-4|SLC35B2', 'nc|ENSG00000157593|Q8TB61-3|SLC35B2', 'nc|ENSG00000157593|Q8TB61-2|SLC35B2', 'ENSG00000157593|ENST00000393812|SLC35B2'] 335 13149 AAIGALQEA True PC9_epitope_Rep5 842.4497820906199 842.44868993586 55.582 2 -0.14707346274418 0.035361746603181976 0.4615114314181555 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 4235 9508 AIDNPLHY True H1975_Epitope_Rep2 941.46068112749 941.45958993586 41.542 2 -0.14707819275222797 0.035361746603181976 0.46152726826481594 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'CNOT1|p.A195Tfs*7|1|0.2|ENSG00000125107|chr16:58586580-58586599|TCTTGTCCAACTCCAAAGGC/-|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 33088 23023 GIPDYFDIV True PC9_epitope_Rep2 1037.5069626135698 1037.5058699358601 94.05 2 -0.14710310448088465 0.03538041690053612 0.46161067456123106 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'ENSG00000100393|ENST00000263253|EP300'] 85992 11509 QHLLDTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 55.348 2 -0.1471424805193265 0.03539908647518774 0.46174250060634653 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 3464 13408 AGLDFSQQF True PC9_epitope_Rep4 1011.4661604307499 1011.46506993586 59.476 2 -0.14718284013210722 0.03541501364348886 0.461877609563428 ['DEFB105A|p.P34Q|1|0.35|ENSG00000186599|chr8:7823393-7823393|G/T|missense_variant'] 34285 11638 GPAAAFTAA True PC9_epitope_Rep2 775.38645355807 775.38534993586 50.092 2 -0.1471831960550052 0.03541501364348886 0.4618788010157762 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 43136 17440 IFDCQGSLI True H1975_Epitope_Rep2 994.4793679667399 994.47826993586 72.373 2 -0.1472145782547934 0.03541501364348886 0.4619838498703832 ['ENSG00000181778|ENST00000377311|TMEM252'] 40189 11268 HQFESSFEL True NCI_RA007_Epitope_Rep3 1122.4981888350198 1122.49708993586 51.437 2 -0.14729991472334936 0.03541501364348886 0.46226947429837545 ['ENSG00000197442|ENST00000359015|MAP3K5'] 7388 8335 ARTPPIINA True PC9_epitope_Rep2 951.55016483823 951.54906993586 37.431 2 -0.147391826560116 0.03541501364348886 0.46257705562140483 ['TMEM132B|p.G937Afs*35|1|0.09|ENSG00000139364|chr12:125654281-125654281|G/-|frameshift_variant', 'nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-2|TMEM132B', 'ENST00000534945.2_1_12:125834026-126068624:+|nuORF', 'TMEM132B|p.S92L|1|0.19|ENSG00000139364|chr12:125349674-125349674|C/T|missense_variant'] 10059 11268 AYSRVQYQF True PC9_epitope_Rep6 1160.5614577979202 1160.56036993586 54.354 2 -0.14743634829960464 0.0354309377297883 0.4627260276609834 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 3886 11141 AHALPTTL True PC9_epitope_Rep5 822.4599528515001 822.45884993586 47.838 2 -0.14744334269779338 0.0354309377297883 0.46274943013729436 ['ENSG00000130309|ENST00000252599|COLGALT1'] 96778 12532 SAPSPGLSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 53.203 2 -0.14745855600248356 0.0354309377297883 0.4628003310862664 ['ENST00000333483.14_1_17:60501366-60501510:+|nuORF'] 88150 10020 QRTKQEVL True PC9_epitope_Rep3 1000.5665431783598 1000.56544993586 43.498 2 -0.14746057224086054 0.0354309377297883 0.46280707694267564 ['ENST00000462159.1_1_1:100573356-100598412:-|nuORF', 'ENSG00000156876|ENST00000287482|SASS6'] 63681 22347 LMTFFLAL True PC9_epitope_Rep6 954.5248616071799 954.52376993586 98.928 2 -0.14746257442507854 0.0354309377297883 0.4628137757516404 ['ENSG00000174669|ENST00000357440|SLC29A2'] 107587 15899 SVPLDLIVS True H1975_Epitope_Rep2 941.54334812229 941.54279496793 66.357 1 -0.14749393748885914 0.03544823049089607 0.46291870541303964 ['ENST00000524739.1_1_11:134129171-134129964:+|nuORF', 'ENST00000527082.5_1_11:134129171-134129738:+|nuORF'] 71118 21332 LYLPFSLTF True NCI_RA007_Epitope_Rep4 1099.59538369515 1099.5942899358602 92.469 2 -0.14751342779615068 0.03544823049089607 0.4629839098969108 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 108351 19981 SYLDSIHFF True PC9_epitope_Rep6 1127.52876068731 1127.52766993586 89.521 2 -0.14756932590334465 0.03544823049089607 0.46317090258994037 ['CREBBP|p.C1486Pfs*4|1|0.04|ENSG00000005339|chr16:3736753-3736754|CA/-|frameshift_variant', 'CREBBP|p.W1676Lfs*59|1|0.23|ENSG00000005339|chr16:3731337-3731338|-/A|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 133921 16470 VYIHPSSALF True PC9_epitope_Rep6 1132.59169529704 1132.5905899358602 75.771 2 -0.14763201717936325 0.03548624279246159 0.4633805962606967 ['ENSG00000067596|ENST00000262415|DHX8'] 128004 19796 VPIIFADEL True PC9_epitope_Rep2 1015.5589981864299 1015.55790993586 81.535 2 -0.147652608914934 0.03550421793978794 0.4634494672627269 ['ENSG00000173402|ENST00000308775|DAG1'] 70639 26268 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 108.63 3 -0.14766564568026008 0.03550421793978794 0.463493068541315 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 128585 14881 VPTNIIAA True PC9_epitope_Rep5 797.4647038787699 797.46360993586 62.244 2 -0.14771546525227205 0.035541539294973494 0.4636596792876763 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 44370 6533 ILEQDQQDKT True NCI_RA007_Epitope_Rep1 1216.5935457718397 1216.59244993586 29.426 2 -0.14772874184897167 0.035541539294973494 0.4637040772734853 ['ENSG00000173451|ENST00000308086|THAP2'] 108348 13575 SYLDRVRSL True PC9_epitope_Rep4 1107.60365696307 1107.60254993586 60.109 2 -0.14775460736907148 0.03557541640067321 0.46379057032822907 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000506277.1_1_5:36885388-36885895:+|nuORF', 'ENST00000402024.2_1_6:116779363-116779789:-|nuORF', 'ENST00000411618.1_1_9:30800375-30800732:-|nuORF', 'ENST00000510337.1_1_5:122971848-122972142:+|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 73439 16011 MVADKFTEL True PC9_epitope_Rep2 1052.52123277872 1052.52012993586 66.841 2 -0.14779675742037815 0.03557541640067321 0.4639315087560316 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 86695 7996 QLIVGVNK True PC9_epitope_Rep4 869.53345214493 869.53234993586 38.207 2 -0.14781007029098533 0.03557541640067321 0.4639760210082549 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 118812 14687 VAAGVLCEL True NCI_RA007_Epitope_Rep3 873.46298962661 873.46188993586 65.16 2 -0.14789873266160672 0.03557541640067321 0.46427243855617656 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 807 4173 AAYNRYFRK True NCI_RA007_Epitope_Rep5 1187.6199757335496 1187.6183249037902 22.574 3 -0.147907374391452 0.03557541640067321 0.46430132697914983 ['ENSG00000111341|ENST00000539261|MGP', 'nc|ENSG00000111341|P08493-2|MGP'] 87161 16266 QPFGDHIISV True PC9_epitope_Rep6 1111.56620882519 1111.5651099358602 74.932 2 -0.14791227385204125 0.03557541640067321 0.4643177051590796 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36', 'WDR36|p.W187Pfs*19|1|0.07|ENSG00000134987|chr5:111098819-111098820|-/CCCAAAAACATGC|frameshift_variant'] 103742 13509 SPVPIAPTA True PC9_epitope_Rep3 851.47526856247 851.47416993586 57.013 2 -0.14791542911882674 0.03557541640067321 0.4643282526707807 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 116620 15028 TVAGKSILTNI True PC9_epitope_Rep2 1115.65502382959 1115.65392993586 63.062 2 -0.14794774766576083 0.03558925359277383 0.4644362842174776 ['ENSG00000198691|ENST00000370225|ABCA4'] 128402 5080 VPRPETAVA True PC9_epitope_Rep6 938.5185303567798 938.51742993586 27.202 2 -0.14798458123001595 0.03558925359277383 0.4645593997652441 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 89222 12021 QVVAIPQNLQ True H1975_Epitope_Rep3 1108.62405805448 1108.62296993586 51.4 2 -0.14799332731547288 0.03558925359277383 0.4645886320873497 ['ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 99418 13098 SHYEEAMGL True PC9_epitope_Rep3 1035.43314605031 1035.43204993586 55.405 2 -0.14801454835765582 0.03558925359277383 0.46465955775424406 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 15018 7556 DYKYRYFRRVP True H1975_Epitope_Rep3 1561.8153810648098 1561.81372490379 34.045 3 -0.14802515644072134 0.03558925359277383 0.4646950113213163 ['nc|ENSG00000112146|Q9UK97-3|FBXO9', 'ENSG00000112146|ENST00000323557|FBXO9', 'nc|ENSG00000112146|Q9UK97|FBXO9', 'ENST00000474457.1_1_6:52958219-52962625:+|nuORF'] 15713 20500 EAWNGFVAA True PC9_epitope_Rep1 963.4450310633498 963.4444849679301 83.665 1 -0.14804697931198388 0.03558925359277383 0.4647679437950474 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1', 'ENSG00000128335|ENST00000358502|APOL2'] 58781 13365 LESIDDALA True H1975_Epitope_Rep2 945.46549172441 945.46494496793 56.541 1 -0.14805986081699754 0.03558925359277383 0.4648109925595776 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 10080 15571 AYTLLLHTW True NCI_RA007_Epitope_Rep2 1116.59678067748 1116.59568993586 65.277 2 -0.1480736208324805 0.03558925359277383 0.4648569760043736 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 126579 14695 VLLTGLHAV True PC9_epitope_Rep6 921.5647522732099 921.56364993586 68.458 2 -0.14816095282597253 0.035607218149817224 0.4651487940692651 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 43093 11571 IEWDKPPVP True NCI_RA007_Epitope_Rep3 1079.56514619603 1079.56404993586 52.645 2 -0.1481689173251457 0.035607218149817224 0.4651754047439498 ['ENSG00000154447|ENST00000284637|SH3RF1', 'SH3RF1|p.S448Cfs*15|1|0.21|ENSG00000154447|chr4:169122103-169122104|CT/-|frameshift_variant', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 26264 8020 FHEPSQEL True PC9_epitope_Rep6 985.4505103666098 985.44940993586 40.324 2 -0.1482037479053656 0.03562242549652865 0.4652917743269166 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 128734 12441 VPYGEFKSV True PC9_epitope_Rep2 1024.5229470308798 1024.52184993586 53.16 2 -0.14820999289975187 0.03562242549652865 0.4653126381025 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'ENST00000572968.5_1_17:19282213-19283750:+|nuORF', 'ENST00000486905.1_1_17:19281885-19283261:+|nuORF'] 34485 19817 GPLLAAAVA True PC9_epitope_Rep4 781.46978925921 781.4692449679301 84.353 1 -0.1482427959441322 0.03562242549652865 0.46542222482456475 ['ENSG00000174326|ENST00000574600|SLC16A11', 'nc|ENSG00000174326|Q8NCK7|SLC16A11'] 30187 15840 FYQPKIQQF True PC9_epitope_Rep4 1197.61824439805 1197.6171499358602 68.852 2 -0.1482524853000985 0.03562242549652865 0.46545459314039017 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 34741 5959 GQEVNELKT True PC9_epitope_Rep1 1016.51383889916 1016.51274993586 27.735 2 -0.1482620208849807 0.03562242549652865 0.4654864471498723 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 132119 20521 VTVDNLGILYI True H1975_Epitope_Rep1 1218.6859896047 1218.6854749679298 85.345 1 -0.14827003645214518 0.03562242549652865 0.46551322300385994 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 120833 6739 VELPHWLRR True NCI_RA007_Epitope_Rep4 1204.68291034328 1204.6818099358602 32.543 2 -0.14829767007561512 0.035659034653465344 0.46560552928660537 ['ENST00000473770.5_1_22:32017296-32019834:-|nuORF', 'ENST00000460723.5_1_22:32017538-32058194:-|nuORF', 'nc|ENSG00000241878|Q9UG56-2|PISD', 'ENSG00000241878|ENST00000439502|PISD'] 30297 5838 GAAGGLRGV True PC9_epitope_Rep3 756.4242360491199 756.42312993586 27.522 2 -0.14829883263948926 0.035659034653465344 0.4656094125567029 ['ENST00000291442.3_1_19:17351565-17356474:-|nuORF'] 29468 7909 FVEQHTPQL True NCI_RA007_Epitope_Rep5 1097.5505587610498 1097.54946993586 37.114 2 -0.14832862157192014 0.035659034653465344 0.4657089123312822 ['ENSG00000168878|ENST00000519937|SFTPB'] 9414 21096 AVTGILVQL True PC9_epitope_Rep6 912.5644179200399 912.56332993586 93.974 2 -0.14843975549998076 0.03569494933869596 0.46608006415810355 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000487805.6_1_3:49750857-49758735:+|nuORF'] 131524 5101 VTKQHNDECK True NCI_RA007_Epitope_Rep3 1200.55572079448 1200.55408490379 27.058 3 -0.1484745389979416 0.03569494933869596 0.4661962126257602 ['ENSG00000168496|ENST00000305885|FEN1', 'nc|ENSG00000168496|P39748-2|FEN1'] 106044 10705 STAAKIMGV True PC9_epitope_Rep1 876.4738886634799 876.47278993586 46.066 2 -0.14848468957712416 0.03569494933869596 0.46623010570688467 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 119648 19380 VAVAGLLTV True PC9_epitope_Rep6 841.52730413533 841.52620993586 87.197 2 -0.14851627033347886 0.03569494933869596 0.46633555025817797 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 48058 20555 IYLWEFLL True PC9_epitope_Rep6 1095.60046907559 1095.59936993586 91.792 2 -0.14854962664662102 0.03575157585366797 0.4664469157510469 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1', 'ENST00000445099.2_1_9:90431423-90431870:+|nuORF', 'ENSG00000102034|ENST00000308167|ELF4'] 81786 18379 PLPPLPPPP True PC9_epitope_Rep3 923.5480395799099 923.54694993586 75.903 2 -0.14861469558629054 0.03575157585366797 0.46666413695338793 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 141130 15066 YSSEIWDLY True H1975_Epitope_Rep1 1174.51825557326 1174.51714993586 63.203 2 -0.14865964553856212 0.035766070565490575 0.466814177359384 ['ENST00000345122.7_1_14:32559748-32559826:+|nuORF'] 105828 14554 SSLLPKEIV True PC9_epitope_Rep6 984.58554728744 984.58444993586 67.875 2 -0.14869341628629854 0.035766070565490575 0.4669268929883625 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 130078 15249 VSDGVPLVL True NCI_RA007_Epitope_Rep4 897.5171333744499 897.51658496793 66.292 1 -0.14872889523104432 0.035766070565490575 0.4670453014697005 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'ENST00000476095.5_1_3:47048543-47048780:+|nuORF'] 62376 19641 LLGPRLVLA True PC9_epitope_Rep1 950.6276868829399 950.62713496793 80.375 1 -0.1487325794610468 0.035766070565490575 0.46705759682529796 ['ENSG00000170348|ENST00000303575|TMED10'] 41677 17322 IAGPGLPDL True PC9_epitope_Rep6 851.47526856247 851.47416993586 79.242 2 -0.1487638327998967 0.035766070565490575 0.4671618945682656 ['nc|ENSG00000284922|Q8WZ04-2|TOMT', 'nc|ENSG00000284922|Q8WZ04|TOMT'] 70648 21492 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 88.139 3 -0.1488380106497085 0.035766070565490575 0.46740941138767383 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 2823 8065 AEVDAAMAA True NCI_RA007_Epitope_Rep1 847.3745685450299 847.37346993586 35.369 2 -0.14885525318858384 0.035766070565490575 0.467466940799206 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77745 14494 NTPAQFASV True PC9_epitope_Rep1 933.4555957470499 933.45448993586 60.576 2 -0.1489162329566142 0.03578471175037699 0.4676703818668037 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 112159 6656 TKASIKDVL True NCI_RA007_Epitope_Rep4 973.5807962601699 973.57968993586 32.224 2 -0.14895112622332635 0.035803352214510795 0.46778678117986694 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 5899 6759 APGKGILAA True PC9_epitope_Rep4 796.4806882960798 796.47958993586 33.196 2 -0.149002790745018 0.03582060699787357 0.4679591113318947 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 36300 7942 GVEGAIHA True PC9_epitope_Rep1 752.3817025308 752.38060993586 35.371 2 -0.14903169138658162 0.03582060699787357 0.46805550290642417 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 57796 13184 LEERSVLFAVA True H1975_Epitope_Rep2 1232.6764875501601 1232.67538993586 55.837 2 -0.14903690155837146 0.03582060699787357 0.46807287962720756 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000487875.5_1_15:91491769-91496943:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 43285 23824 IFSSAFLVS True PC9_epitope_Rep2 969.51713337445 969.51658496793 97.109 1 -0.14906219489403422 0.035839245326786645 0.4681572340248043 ['KCNJ4|p.A64S|1|0.4|ENSG00000168135|chr22:38427943-38427943|C/A|missense_variant'] 110318 7986 TETDSLVSA True H1975_Epitope_Rep3 921.4291062156899 921.42800993586 35.688 2 -0.14908351723899183 0.03585580361457427 0.468228341444861 ['nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183881502-183882771:+|nuORF'] 107913 18931 SVVSPSSFENV True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 78.183 2 -0.14909275083252652 0.03585580361457427 0.46825913334502056 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42'] 291 16464 AAGTVFTTV True PC9_epitope_Rep2 865.4545331178899 865.45342993586 68.57 2 -0.14909984963101863 0.03585580361457427 0.46828280578250087 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|532|37.25|0.0|21.83|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 9429 12833 AVTWRARPS True NCI_RA007_Epitope_Rep1 1042.5672118846999 1042.5661099358601 53.907 2 -0.1490999609344753 0.03585580361457427 0.4682831769444292 ['nc|ENSG00000196092|Q02548-5|PAX5', 'nc|ENSG00000196092|Q02548-11|PAX5'] 65027 12788 LQISTLEER True PC9_epitope_Rep3 1087.58733819259 1087.58624993586 54.21 2 -0.1491598054739087 0.03587374606181263 0.4684827267544093 ['ENSG00000172766|ENST00000379406|NAA16', 'nc|ENSG00000172766|Q6N069-5|NAA16', 'ENST00000476980.5_1_13:41885589-41929305:+|nuORF', 'nc|ENSG00000172766|Q6N069-4|NAA16', 'nc|ENSG00000172766|Q6N069-3|NAA16', 'nc|ENSG00000172766|Q6N069-2|NAA16'] 44990 13213 IPATPGIGA True PC9_epitope_Rep2 795.4490538146299 795.44850496793 56.102 1 -0.14917065065750576 0.03587374606181263 0.46851888694011967 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 73736 11290 NAAPGVDL True PC9_epitope_Rep6 755.38136817763 755.38026993586 54.442 2 -0.14925701377743092 0.03591032083494395 0.468806810005049 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 79117 6155 PALPPQAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 28.72 2 -0.14927257385879633 0.03591032083494395 0.46885867950328075 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 36542 14822 GVGTSLLSTL True PC9_epitope_Rep3 946.53351171458 946.53240993586 62.149 2 -0.1492944138947958 0.03591032083494395 0.46893148025891196 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3'] 96352 9060 RYSTQIHSF True PC9_epitope_Rep5 1137.55670677065 1137.5550749037902 39.793 3 -0.14940873840733834 0.0359482808604395 0.46931250872610564 ['ENSG00000180535|ENST00000609256|BHLHA15'] 127366 17795 VMVLARTEL True PC9_epitope_Rep6 1030.58450174162 1030.5834099358601 81.082 2 -0.14951856959005963 0.03596621765262934 0.4696784715583832 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'nc|ENSG00000142303|Q9H324-2|ADAMTS10'] 136209 24176 WRRWRRRRRGG True PC9_epitope_Rep4 1596.9198951897597 1596.91878993586 101.47 2 -0.14954170378820197 0.03596621765262934 0.46975554452686713 ['ENST00000396912.1_1_7:5085705-5085882:+|nuORF'] 114539 15759 TQAPPNVVL True PC9_epitope_Rep2 937.5232813840499 937.52218993586 65.884 2 -0.14962297082095982 0.03598137162070764 0.47002625919547036 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 128414 13485 VPRPPSLLA True PC9_epitope_Rep4 948.5756513100799 948.57454993586 59.766 2 -0.14965688424494566 0.03598137162070764 0.4701392162630955 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A', 'ENST00000494435.5_1_21:47924311-47965916:+|nuORF'] 113161 17800 TLPPSALAP True PC9_epitope_Rep5 865.49091862661 865.48982993586 73.487 2 -0.14967372887770833 0.03598137162070764 0.470195318313508 ['ENST00000483551.6_1_15:69082366-69082516:-|nuORF'] 39624 16176 HLMKNLCL True PC9_epitope_Rep5 970.5092286263799 970.50812993586 67.211 2 -0.14968156070903824 0.03598137162070764 0.47022140197435963 ['ENST00000442441.5_1_21:34841172-34852188:-|nuORF'] 92753 7434 RPAAGFVA True PC9_epitope_Rep5 787.4340724568299 787.43296993586 33.549 2 -0.14970363026276548 0.03598137162070764 0.4702949014517996 ['ENSG00000141526|ENST00000582743|SLC16A3'] 46012 10408 ISGFEAGL True H1975_Epitope_Rep1 792.4017692690398 792.40122496793 44.985 1 -0.14975981202883745 0.03598137162070764 0.4704819903461608 ['ENST00000319074.5_1_14:23567114-23567315:+|nuORF'] 110583 10566 TFRSSLFLW True NCI_RA007_Epitope_Rep4 1155.6076797143498 1155.60604490379 47.487 3 -0.14977892359739386 0.036 0.47054562771627106 ['ENSG00000185245|ENST00000329125|GP1BA'] 70147 14593 LVPPDQPEV True PC9_epitope_Rep5 992.51786165044 992.51676993586 61.133 2 -0.14983472245920237 0.036031684698608964 0.470731410115333 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 57321 7196 LEADHVISA True H1975_Epitope_Rep3 953.4818104948899 953.48070993586 32.654 2 -0.14992524766122234 0.036031684698608964 0.47103276401260974 ['ENST00000462977.1_1_1:161139323-161139551:+|nuORF', 'PPOX|p.P361Lfs*5|1|0.18|ENSG00000143224|chr1:161170498-161170498|C/-|frameshift_variant', 'ENST00000495483.5_2_1:161137139-161146869:+|nuORF', 'ENSG00000143224|ENST00000367999|PPOX'] 136210 22972 WRRWRRRRRGG True PC9_epitope_Rep6 1596.9198951897597 1596.91878993586 101.46 2 -0.14996358143872002 0.036031684698608964 0.4711603565572896 ['ENST00000396912.1_1_7:5085705-5085882:+|nuORF'] 39956 9602 HPKYSDMIVA True PC9_epitope_Rep4 1159.56957995347 1159.56848993586 44.559 2 -0.1499698404714958 0.036031684698608964 0.47118118845398843 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 39201 13276 HIGDAVVI True PC9_epitope_Rep3 822.4599528515 822.45884993586 56.101 2 -0.14998328056308802 0.036031684698608964 0.4712259200137289 ['ENSG00000132646|ENST00000379143|PCNA'] 38985 18110 HHLIVITSL True PC9_epitope_Rep5 1031.6127650947901 1031.6116699358602 74.672 2 -0.15001748426641243 0.036031684698608964 0.47133975120294563 ['nc|ENSG00000133318|O95197-5|RTN3'] 106654 15983 STTGMLTGV True PC9_epitope_Rep3 865.42151873745 865.4209649679301 66.624 1 -0.15006945259976415 0.036031684698608964 0.47151268664618845 ['ENSG00000066084|ENST00000301180|DIP2B'] 137338 14839 YDLDNYQTTF True PC9_epitope_Rep5 1278.54044756982 1278.5393499358602 62.08 2 -0.1500768119836426 0.036031684698608964 0.4715371748573071 ['nc|ENSG00000103310|Q05996-2|ZP2', 'ENSG00000103310|ENST00000574091|ZP2'] 127373 17791 VNAIQPNI True PC9_epitope_Rep4 867.48141657207 867.4808649679301 76.462 1 -0.15020603491817733 0.036031684698608964 0.4719670939161818 ['ENST00000312655.8_1_17:57474537-57474684:+|nuORF'] 2465 16843 AEQLMTLISAA True H1975_Epitope_Rep1 1146.59546034814 1146.5943699358602 70.197 2 -0.15020993401491783 0.036031684698608964 0.47198006403949977 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 101766 14411 SLNRYFIKV True PC9_epitope_Rep2 1138.6498788795 1138.6482449037899 60.699 3 -0.15024100167604545 0.03608825006761717 0.4720834046406176 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'nc|ENSG00000141568|Q01167-2|FOXK2', 'ENSG00000141568|ENST00000335255|FOXK2'] 23272 8954 EVPQASQVPPP True NCI_RA007_Epitope_Rep5 1147.5873381925899 1147.58624993586 41.101 2 -0.1502544993784899 0.03608825006761717 0.47212829982148474 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 111477 9312 THVGPTPAI True PC9_epitope_Rep1 891.48141657207 891.48030993586 40.675 2 -0.15031904834659415 0.03610268693619734 0.4723429788322273 ['ENSG00000157259|ENST00000287957|GATAD1'] 56545 22319 LDGLYLLTL True PC9_epitope_Rep4 1019.5902983147099 1019.58920993586 94.089 2 -0.15032754291258274 0.03610268693619734 0.47237122791430375 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 65510 7385 LRNRFASP True H1975_Epitope_Rep2 959.5300980999899 959.52900993586 33.346 2 -0.15035044694102423 0.03610268693619734 0.47244739354102 ['ENST00000480941.1_1_1:46126892-46152773:-|nuORF'] 100711 13493 SLDRQLTGL True PC9_epitope_Rep2 1001.55055876105 1001.54946993586 57.188 2 -0.15041968802043165 0.03610268693619734 0.4726776245961716 ['ENSG00000168434|ENST00000307149|COG7'] 66205 13180 LSESQLVHGP True PC9_epitope_Rep1 1065.5454733806098 1065.54436993586 55.56 2 -0.15044108603818182 0.03610268693619734 0.47274876677906513 ['ENST00000606150.5_1_6:13281194-13295113:-|nuORF'] 4692 10653 ALASHLIEA True PC9_epitope_Rep6 923.5076313199099 923.50652993586 51.795 2 -0.15044592342146784 0.03610268693619734 0.472764849172133 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 142332 11243 YYEEQHPEL True PC9_epitope_Rep3 1206.5193182024198 1206.51822993586 48.254 2 -0.15044618484535457 0.03610268693619734 0.4727657182982896 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 116389 14210 TTIEAIHGL True PC9_epitope_Rep2 953.51819600361 953.51708993586 59.926 2 -0.15050040917585192 0.03611642234969195 0.47294598010434497 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67955470-67955572:-|nuORF'] 5257 12310 ALPRGFLSP True PC9_epitope_Rep6 956.5443511817999 956.54324993586 58.744 2 -0.15051193765230306 0.03611642234969195 0.47298430205000946 ['nc|ENSG00000167566|Q9HCH0-4|NCKAP5L', 'ENST00000491441.1_1_12:50196735-50197827:-|nuORF'] 112947 23126 TLLLLLSEA True PC9_epitope_Rep2 971.59029831471 971.58920993586 94.446 2 -0.15059210788506489 0.03611642234969195 0.473250767775926 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 36117 21128 GVAIPLPGV True PC9_epitope_Rep2 821.50108938749 821.5005449679301 86.727 1 -0.15059377932116985 0.03611642234969195 0.47325632266727874 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 5900 8165 APGKGILAA True PC9_epitope_Rep5 796.4806882960798 796.47958993586 36.348 2 -0.15061230714246773 0.03611642234969195 0.4733178969906237 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 77920 19485 NVIQTVPNL True PC9_epitope_Rep2 996.5603951687599 996.55928993586 80.331 2 -0.15062807332413958 0.03611642234969195 0.4733702912839675 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7', 'ENST00000550231.1_1_12:110825542-110834223:-|nuORF'] 7993 20826 ATDIFSYLVEY True H1975_Epitope_Rep3 1319.62853429823 1319.6274299358602 86.996 2 -0.15066100694999082 0.03611642234969195 0.4734797301644425 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'ENST00000554574.1_1_14:91942052-91948315:-|nuORF', 'nc|ENSG00000100796|Q6IN85-5|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A'] 84466 13471 QAIEKLEEI True PC9_epitope_Rep6 1071.58119018299 1071.58008993586 63.511 2 -0.15067118963092602 0.03611642234969195 0.4735135655975667 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B', 'ANKRD18A|p.E833A|1|0.3|ENSG00000180071|chr9:38577898-38577898|T/G|missense_variant', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 111421 4909 THSNMANAL True PC9_epitope_Rep6 957.4338147566499 957.43270993586 26.438 2 -0.15069435931429442 0.03613434017651944 0.4735905516903593 ['ENSG00000169756|ENST00000544547|LIMS1'] 123308 15600 VGLPVLAQ True PC9_epitope_Rep6 795.48543932335 795.48489496793 72.212 1 -0.15071120437624494 0.03613434017651944 0.4736465202154219 ['ENST00000572652.5_1_17:78195046-78195277:+|nuORF'] 91994 23768 RKREEEERRKQ True PC9_epitope_Rep4 1542.8338846632598 1542.83278993586 99.805 2 -0.1507628715883522 0.03619018191649608 0.4738181728063494 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 53417 5397 KQYAGKYVL True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 28.239 2 -0.15078293828701098 0.03619018191649608 0.47388483407584947 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 45369 11364 IQDNKFIEA True PC9_epitope_Rep3 1076.55022440788 1076.54912993586 48.716 2 -0.1507835881146978 0.03619018191649608 0.4738869927394111 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 115214 8351 TRDSNIIRL True PC9_epitope_Rep6 1086.61455599994 1086.6134499358602 41.774 2 -0.15084149525026525 0.03620739596408226 0.47407934086590564 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS'] 129603 7435 VRNRYTHVK True PC9_epitope_Rep3 1171.65742387143 1171.6557749037902 33.604 3 -0.15087223924398258 0.03620739596408226 0.47418145111204807 ['GCNT4|p.F378Sfs*21|1|0.19|ENSG00000176928|chr5:75028905-75028905|A/-|frameshift_variant', 'ENSG00000176928|ENST00000652361|GCNT4'] 46872 17987 ITLDGGAIYEA True PC9_epitope_Rep6 1121.5604547384098 1121.5593499358602 81.814 2 -0.15087648660170097 0.03620739596408226 0.47419555728979357 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF', 'ENST00000473501.1_1_3:196753297-196754890:-|nuORF'] 126686 24150 VLPDMFFSF True PC9_epitope_Rep3 1101.5205045027299 1101.51940993586 98.18 2 -0.15093184564839865 0.036226007028926734 0.4743794004541748 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 142379 15299 YYEKLHTYF True PC9_epitope_Rep5 1262.5971746003 1262.59552490379 63.857 3 -0.15098402262367072 0.03626392724042713 0.47455265337712726 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 82566 21127 PPVGGFSF True PC9_epitope_Rep4 806.39628996578 806.39574496793 89.428 1 -0.15101730637043806 0.03630184598748745 0.4746631599883408 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 8197 5415 ATFLFRRGLK True NCI_RA007_Epitope_Rep3 1207.71896149883 1207.7173049037901 28.311 3 -0.15106090796657085 0.03631975284804016 0.4748079095555288 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 107337 22704 SVLGALIGV True PC9_epitope_Rep2 827.5116540711899 827.51054993586 92.826 2 -0.15106108241690547 0.03631975284804016 0.474808488668392 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 3296 10868 AGFSPECPEDP True H1975_Epitope_Rep2 1147.44919003727 1147.44808993586 46.833 2 -0.1511118716445349 0.036338359946708886 0.47497708014574846 ['ENSG00000136002|ENST00000409359|ARHGEF4'] 84002 6807 PVSSTYSQL True PC9_epitope_Rep2 980.4814761417201 980.48036993586 31.59 2 -0.15119212407156518 0.03639277164259788 0.47524342942273345 ['ENSG00000161682|ENST00000293443|FAM171A2'] 83124 22515 PSPYTLILF True PC9_epitope_Rep1 1049.57973363101 1049.5786299358601 91.406 2 -0.1512265265526416 0.03639277164259788 0.47535759128555694 ['ENST00000367607.7_2_1:180082752-180082971:+|nuORF'] 96857 4692 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 25.421 2 -0.15124636367430944 0.03639277164259788 0.4754234147121168 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 65074 19573 LQLGNLLSL True PC9_epitope_Rep6 969.58588164061 969.58478993586 87.951 2 -0.15125512682915324 0.03639277164259788 0.47545249152236757 ['ENST00000509462.5_1_5:68661579-68665127:-|nuORF'] 102647 12635 SLWTSLSL True H1975_Epitope_Rep1 905.48583324617 905.48472993586 53.653 2 -0.15128422894798382 0.03639277164259788 0.47554904996839015 ['nc|ENSG00000014919|Q7KZN9-2|COX15', 'ENSG00000014919|ENST00000016171|COX15'] 114194 7916 TPLHVTSPSSA True PC9_epitope_Rep5 1095.55603806431 1095.5549499358601 35.389 2 -0.15128904510750982 0.036411375176168506 0.4755650289108892 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 29354 16068 FVDGSAIQV True PC9_epitope_Rep6 934.47599683846 934.47488993586 74.132 2 -0.15135547602890803 0.03642857142857143 0.4757854121299736 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 107584 21936 SVPIEIPTI True PC9_epitope_Rep1 967.5589981864299 967.55790993586 89.194 2 -0.1514081966526407 0.03642857142857143 0.4759602854289864 ['ENSG00000112996|ENST00000507110|MRPS30'] 63057 14230 LLQESLAQA True PC9_epitope_Rep4 971.52876068731 971.52766993586 62.644 2 -0.15140873898009147 0.03642857142857143 0.4759620841975443 ['ENSG00000168209|ENST00000307365|DDIT4'] 130751 19147 VSYLHMLQL True PC9_epitope_Rep1 1102.58450174162 1102.5834099358601 78.441 2 -0.15144314953240767 0.03646647748112971 0.47607621059320915 ['ENSG00000183111|ENST00000333677|ARHGEF37'] 25675 12381 FEQFKEVLP True H1975_Epitope_Rep2 1135.5913609438699 1135.59026993586 52.71 2 -0.15149645869951633 0.03648366921473245 0.4762529966328356 ['nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A', 'ENST00000467042.1_1_2:99182504-99185377:+|nuORF'] 25971 21034 FGANAILGV True PC9_epitope_Rep3 860.4756029156399 860.4745099358599 86.185 2 -0.15151975806517404 0.03648366921473245 0.47633025540457813 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 139840 6778 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.39156993586 31.477 2 -0.15154694866350843 0.03648366921473245 0.4764204113719711 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 47985 15954 IYKFITERF True PC9_epitope_Rep4 1215.6651945904698 1215.66355490379 69.296 3 -0.15163793215619753 0.03649874541594287 0.4767220400272785 ['ENSG00000178919|ENST00000375123|FOXE1'] 16826 13047 EEYEYMNRRRR True PC9_epitope_Rep3 1600.75285746124 1600.75120490379 55.213 3 -0.15165928075289478 0.03649874541594287 0.4767928047248528 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 105306 11063 SRNKDTYFL True PC9_epitope_Rep5 1142.57202248162 1142.57038490379 47.542 3 -0.15167460723315604 0.03649874541594287 0.4768436053704827 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 14107 8172 DSADGFLK True NCI_RA007_Epitope_Rep2 851.40249754503 851.40140993586 36.424 2 -0.1516937741291156 0.03649874541594287 0.4769071325045014 ['CON__Q29443', 'CON__Q0IIK2'] 102988 16870 SPFGSITSA True PC9_epitope_Rep5 865.4181476091701 865.41704993586 69.901 2 -0.15171976130211223 0.03649874541594287 0.47699325987412033 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 82702 19607 PQVINQAVGL True PC9_epitope_Rep1 1037.58694426977 1037.58637496793 80.246 1 -0.15179769812015573 0.03649874541594287 0.47725152534976933 ['nc|ENSG00000153266|Q8TBJ5-2|FEZF2', 'ENSG00000153266|ENST00000283268|FEZF2'] 35451 9776 GSHSMRYFF True H1975_Epitope_Rep2 1130.4967493663798 1130.4951149037902 42.591 3 -0.1518278233177211 0.036514522821576766 0.4773513396145448 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 79131 6357 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 29.428 2 -0.151841988471219 0.036514522821576766 0.47739827052001205 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 84912 3643 QEDHRSEEKSK True NCI_RA007_Epitope_Rep2 1371.6378701953097 1371.63622490379 18.82 3 -0.15184220272498122 0.036514522821576766 0.4773989803559135 ['ENST00000496433.5_1_2:3193107-3197993:-|nuORF', 'ENSG00000032389|ENST00000382125|EIPR1'] 18656 13726 ELAAELAL True H1975_Epitope_Rep2 828.4592841451599 828.45873496793 57.942 1 -0.15184877752418327 0.036514522821576766 0.477420762877397 ['ENSG00000234438|ENST00000432196|KBTBD13'] 102814 4044 SNNKYAASSY True NCI_RA007_Epitope_Rep4 1103.48835242731 1103.48724993586 21.815 2 -0.15188882514093097 0.036514522821576766 0.47755343384227256 ['nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5', 'ENSG00000128322|ENST00000330377|IGLL1'] 114384 13887 TPSPIISP True PC9_epitope_Rep6 810.4487194614601 810.4481749679301 65.253 1 -0.15196631347686781 0.03655241624208739 0.4778101000479532 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 118391 18599 TYPAELNNI True PC9_epitope_Rep3 1033.50802524273 1033.5069299358602 76.764 2 -0.1519830987583202 0.036566775370009456 0.4778656913950137 ['ENSG00000106546|ENST00000242057|AHR'] 11719 12391 DHARTITVAL True PC9_epitope_Rep1 1095.60365696307 1095.60254993586 52.523 2 -0.1519855190009234 0.036566775370009456 0.47787370681882874 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 29914 18829 FVWSGTAEA True PC9_epitope_Rep5 966.4446967101799 966.44358993586 77.44 2 -0.15201131289342937 0.036566775370009456 0.4779591285418246 ['ENSG00000124422|ENST00000261497|USP22'] 92832 18336 RPAVLLLTA True PC9_epitope_Rep3 952.6069514383599 952.60584993586 75.739 2 -0.15203549844455758 0.036566775370009456 0.47803921863370624 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6', 'nc|ENSG00000124587|Q13608-2|PEX6'] 93901 17039 RRFMQTFVL True PC9_epitope_Rep4 1196.64883333368 1196.64718490379 73.532 3 -0.15204067459660972 0.036566775370009456 0.4780563587192182 ['G3BP1|p.A115S|1|0.19|ENSG00000145907|chr5:151791054-151791054|G/T|missense_variant', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 17381 9472 EHDPHVLLA True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 41.391 2 -0.15206800922422936 0.036566775370009456 0.47814686952806695 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 42958 9495 IESPFVPDP True H1975_Epitope_Rep1 999.4913125494298 999.49020993586 41.443 2 -0.15216027484628245 0.036566775370009456 0.4784523323140322 ['GRK7|p.P469S|1|0.31|ENSG00000114124|chr3:141816793-141816793|C/T|missense_variant'] 102625 7747 SLWPRQGR True PC9_epitope_Rep2 998.5409971368599 998.53990993586 35.174 2 -0.1522057921406294 0.036585365853658534 0.47860299828608044 ['nc|ENSG00000074660|Q14162-3|SCARF1'] 45376 7246 IQDSRTLP True PC9_epitope_Rep1 928.4977949122 928.49668993586 32.686 2 -0.15226308673678515 0.0365983060984315 0.4787926220264617 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 56319 23766 LDAYSTLIF True PC9_epitope_Rep1 1041.53826274185 1041.53767496793 96.211 1 -0.15226498462744864 0.0365983060984315 0.478798902838382 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 103465 7411 SPPVPGPSA True PC9_epitope_Rep6 807.41266830591 807.41156993586 37.727 2 -0.15227172234631442 0.0365983060984315 0.4788212001473849 ['ENSG00000143756|ENST00000366862|FBXO28'] 98834 14837 SGRKSPVLYL True PC9_epitope_Rep6 1118.64479349906 1118.64368993586 69.044 2 -0.15229074235184478 0.0365983060984315 0.4788841413715204 ['CON__ENSEMBL:ENSBTAP00000034412'] 62195 15514 LLEPVLLLGK True NCI_RA007_Epitope_Rep5 1093.7110821537299 1093.7099899358602 66.373 2 -0.1523120786219774 0.0365983060984315 0.4789547437756844 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 128632 9223 VPVDTGVAA True PC9_epitope_Rep4 827.4388830537498 827.43778993586 43.074 2 -0.15232383076862266 0.0365983060984315 0.4789936302754759 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 83859 6699 PVNSRANQDF True PC9_epitope_Rep1 1146.5417849825 1146.54013490379 30.57 3 -0.15232621050116216 0.0365983060984315 0.4790015043865269 ['ENSG00000023445|ENST00000263464|BIRC3'] 109685 7188 TEDAPRPPVP True H1975_Epitope_Rep2 1077.5454733806098 1077.54436993586 32.582 2 -0.15239386026931884 0.0365983060984315 0.479225324271886 ['nc|ENSG00000103126|O15169-2|AXIN1', 'ENSG00000103126|ENST00000262320|AXIN1'] 46829 11573 ITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep1 1118.5277749905702 1118.52727496793 48.985 1 -0.1524461699021183 0.0365983060984315 0.47939836309585965 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 75051 9178 NHSTSFSL True PC9_epitope_Rep4 891.4086455546301 891.40754993586 42.897 2 -0.1525007182573808 0.0366161859747275 0.4795787813720269 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 41733 17923 IALSSYSSF True PC9_epitope_Rep2 973.4756624852901 973.47456993586 74.247 2 -0.1525243709372623 0.0366161859747275 0.47965700410329615 ['ENST00000390658.3_2_19:40030720-40030798:-|nuORF'] 56202 8579 LAYTLGVK True H1975_Epitope_Rep3 863.5116540711899 863.51054993586 37.99 2 -0.15267774375842783 0.03665052757469956 0.4801641066787763 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000559385.1_1_15:53230224-53230302:-|nuORF'] 114382 15695 TPSPIISP True PC9_epitope_Rep1 810.4487194614601 810.4481749679301 65.193 1 -0.15268256544059436 0.03665052757469956 0.48018004533098774 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 129494 25957 VRKERKRHKT True PC9_epitope_Rep4 1336.81638412432 1336.8152899358602 109.66 2 -0.1527360381197465 0.03665052757469956 0.48035679150343424 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 88807 11753 QTVAVGVIKA True PC9_epitope_Rep1 984.5967806774798 984.59568993586 50.081 2 -0.1527440118794577 0.03665052757469956 0.4803831453694489 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 90143 6303 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.5503749679299 29.18 1 -0.15279156563162136 0.03665052757469956 0.4805403019502149 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 142312 15769 YYDPKHVIF True PC9_epitope_Rep3 1180.59169529704 1180.5900449037902 65.814 3 -0.1527971602144981 0.03665052757469956 0.4805587896752743 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 118774 2534 VAAAESHPL True PC9_epitope_Rep6 893.46068112749 893.45958993586 14.683 2 -0.15287769837450033 0.036707688746576136 0.4808249022690723 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 57800 7117 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 32.308 2 -0.15289442625618693 0.036725561299282464 0.4808801667096756 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 115785 9217 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4445749679298 40.407 1 -0.15290274336107215 0.036725561299282464 0.4809076432349304 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 26291 10249 FHGPGEAL True PC9_epitope_Rep3 826.3973525949399 826.3962499358599 44.373 2 -0.15310941558983773 0.03674414119008583 0.48159020294896665 ['ENSG00000277150|ENST00000622749|F8A3'] 85152 2694 QEMQEVQSSR True PC9_epitope_Rep3 1220.5455500336 1220.54444993586 14.824 2 -0.1531599462756424 0.03676130226816849 0.4817570259699147 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 103664 18744 SPVFFASPSP True PC9_epitope_Rep3 1034.50729696674 1034.5061899358602 77.321 2 -0.1531801696951613 0.03676130226816849 0.4818237852638368 ['nc|ENSG00000065989|P27815-2|PDE4A'] 61107 18215 LIIDENGVHEL True PC9_epitope_Rep4 1250.65066672514 1250.6495699358602 78.132 2 -0.15323480752622148 0.03676130226816849 0.48200413034231565 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 56827 9794 LDNQIKKDLA True H1975_Epitope_Rep3 1156.64518742188 1156.6440899358602 42.696 2 -0.1533471260449551 0.03677846136043664 0.4823747756869907 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 108991 6660 TAGPAVHL True H1975_Epitope_Rep3 764.41808803952 764.41698993586 30.57 2 -0.15334786280684762 0.03677846136043664 0.48237720656907923 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 29909 18934 FVWSGTAEA True PC9_epitope_Rep1 966.4446967101799 966.44358993586 77.614 2 -0.15335362032706013 0.03677846136043664 0.4823962028312056 ['ENSG00000124422|ENST00000261497|USP22'] 5653 9546 APAASYGVGA True PC9_epitope_Rep5 862.4184819623399 862.41738993586 41.676 2 -0.15336441710365503 0.036790651934980045 0.48243182467983226 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 54132 17630 KVPEWVDTV True PC9_epitope_Rep1 1071.5600608155898 1071.5594749679299 72.606 1 -0.15337664891987557 0.036790651934980045 0.4824721798226153 ['ENSG00000105372|ENST00000598742|RPS19'] 30298 5852 GAAGGLRGV True PC9_epitope_Rep5 756.4242360491199 756.42312993586 27.502 2 -0.15343745269112105 0.036790651934980045 0.4826727621729046 ['ENST00000291442.3_1_19:17351565-17356474:-|nuORF'] 128624 10188 VPVDTGVAA True PC9_epitope_Rep1 827.4388830537498 827.43778993586 44.067 2 -0.15346858977534916 0.036790651934980045 0.4827754650082678 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 113955 5553 TPAGAAVSA True PC9_epitope_Rep1 743.3813681776301 743.3808149679301 26.189 1 -0.15348924242187434 0.036790651934980045 0.4828435807707364 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 111512 7780 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1005.4437110134398 1005.4431749679301 34.879 1 -0.1535010127633287 0.036790651934980045 0.482882399431434 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 97333 2772 SEAPPTNQATA True H1975_Epitope_Rep3 1085.49891711101 1085.4978299358602 14.748 2 -0.1535059799762705 0.036790651934980045 0.48289878093317296 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 118611 13934 TYSEKTTLF True PC9_epitope_Rep5 1088.5389910178399 1088.5378899358602 58.618 2 -0.1535086146439338 0.036790651934980045 0.4829074697767879 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 118428 12859 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47054993586 60.978 2 -0.1535810019780818 0.036790651934980045 0.48314616917850034 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 26360 9083 FHSNDGGNVL True PC9_epitope_Rep3 1058.47812209678 1058.4770299358602 39.877 2 -0.15359096842537528 0.036790651934980045 0.48317902989326755 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 64254 12581 LPHGFTNMA True PC9_epitope_Rep2 986.4643866089401 986.46328993586 53.699 2 -0.153610886972098 0.036809224480351704 0.4832447011501542 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 115065 6229 TRDEDHIAL True PC9_epitope_Rep4 1068.51998690876 1068.5188899358602 31.006 2 -0.15364892945329994 0.03684565699411935 0.4833701162149929 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 142130 20134 YVPPELITL True PC9_epitope_Rep6 1043.59029831471 1043.58977496793 90.117 1 -0.15367768625457554 0.03684565699411935 0.4834649098010186 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 99843 9627 SILFYRCRK True PC9_epitope_Rep1 1184.64883333368 1184.64718490379 41.885 3 -0.15368158483363514 0.03684565699411935 0.4834777604161779 ['NEIL3|p.F266Lfs*7|1|0.79|ENSG00000109674|chr4:177341569-177341569|T/-|frameshift_variant', 'ENSG00000109674|ENST00000264596|NEIL3', 'chr4:177339857-177341476|452|10.86|0.67|4.03|+|0|NEIL3,NEIL3|1'] 68353 13059 LTEMQVDSSY True H1975_Epitope_Rep2 1171.50670491339 1171.50560993586 55.354 2 -0.15373636164579418 0.036862805583404025 0.4836583018462974 ['VPS13B|p.E409D|1|0.24|ENSG00000132549|chr8:99134652-99134652|G/T|missense_variant'] 104707 16214 SQVDRLVAL True PC9_epitope_Rep5 999.5712942056298 999.5707749679301 67.359 1 -0.15377165951879868 0.036862805583404025 0.4837746263107065 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 116806 10974 TVEELCYQNE True H1975_Epitope_Rep1 1226.51251856982 1226.5114299358602 47.176 2 -0.15379395610244737 0.036862805583404025 0.4838480986615669 ['TSC2|p.D396Y|1|0.17|ENSG00000103197|chr16:2061937-2061937|G/T|missense_variant'] 130896 17928 VTDDLVCLVY True H1975_Epitope_Rep3 1138.55801221026 1138.5569099358602 75.087 2 -0.15387827509432933 0.03689994216310006 0.48412590521644633 ['ENSG00000143742|ENST00000304786|SRP9'] 14084 9122 DRSVPVRL True PC9_epitope_Rep5 940.5454138109599 940.54430993586 40.034 2 -0.15388422727875337 0.03689994216310006 0.48414551330703465 ['ENST00000507678.5_1_4:177241188-177241371:+|nuORF', 'ENST00000513139.1_1_4:177241188-177248429:+|nuORF', 'ENSG00000129128|ENST00000503362|SPCS3'] 134554 14366 VYSDYLQTI True NCI_RA007_Epitope_Rep4 1100.53899101784 1100.5378899358602 62.565 2 -0.1539860557219422 0.03691423945100912 0.4844809096507614 ['ENSG00000179715|ENST00000546455|PCED1B'] 30883 9551 GAPQVVAVTG True PC9_epitope_Rep4 897.4919812557698 897.4914349679301 44.352 1 -0.15399392300834855 0.03691423945100912 0.4845068181983214 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 89091 19158 QVPDWLHHL True PC9_epitope_Rep3 1143.58252759567 1143.5808749037901 78.912 3 -0.15400758237244766 0.03691423945100912 0.48455179976712226 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 60737 13035 LHRKVEII True PC9_epitope_Rep4 1006.6287495120998 1006.62764993586 58.032 2 -0.15406820720277925 0.03691423945100912 0.48475142079959593 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 111715 19605 TIGIVDNEL True PC9_epitope_Rep3 972.51277627 972.51166993586 80.648 2 -0.15407207376814702 0.03691423945100912 0.484764151112263 ['ENSG00000145723|ENST00000399004|GIN1'] 34479 19171 GPLGALPVE True PC9_epitope_Rep2 851.47526856247 851.47472496793 79.114 1 -0.15411074214401774 0.03691423945100912 0.4848914550554654 ['ENST00000397261.7_1_3:9848473-9848707:+|nuORF'] 111479 9369 THVGPTPAI True PC9_epitope_Rep3 891.48141657207 891.48030993586 40.978 2 -0.15414948154451028 0.03691423945100912 0.4850189779508601 ['ENSG00000157259|ENST00000287957|GATAD1'] 19091 14493 ELGFHEGDVI True PC9_epitope_Rep4 1114.5294889632999 1114.52838993586 63.658 2 -0.15418182653554563 0.036931380107941406 0.48512544021168774 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 43402 11359 IGELIM[Oxidation]IKFK True H1975_Epitope_Rep3 1206.70461725474 1206.7035099358602 48.803 2 -0.1541962442815946 0.036931380107941406 0.48517289229671384 ['ENSG00000166035|ENST00000299022|LIPC'] 648 10076 AATATFAAA True PC9_epitope_Rep1 793.3970182417698 793.39592993586 43.628 2 -0.15422713422789608 0.036931380107941406 0.48527455116492124 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 15483 10932 EALRSQAAL True PC9_epitope_Rep1 957.5243440132099 957.52324993586 46.936 2 -0.1542386592385508 0.036948518782645566 0.4853124775554512 ['ENSG00000110811|ENST00000290510|P3H3'] 24340 18278 EYVSQHLVF True PC9_epitope_Rep3 1120.5553097883198 1120.5542099358602 75.513 2 -0.15426704862440915 0.036948518782645566 0.4854058954005891 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 76965 11149 NRDYPPPPL True PC9_epitope_Rep4 1067.5399940773498 1067.5388899358602 50.664 2 -0.15429558220599646 0.036948518782645566 0.48549977960612495 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 83323 9298 PTEDELSLP True H1975_Epitope_Rep1 999.4760564081099 999.47547496793 40.673 1 -0.1543442859258719 0.03696708041014571 0.48566001086828736 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 117337 10021 TVNWEEPEY True H1975_Epitope_Rep3 1165.49276910141 1165.49166993586 43.585 2 -0.15438010319359416 0.03698564132215477 0.4857778315416016 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 56318 20481 LDAYSTLIF True H1975_Epitope_Rep3 1041.53826274185 1041.53767496793 85.619 1 -0.1544008795148089 0.037003488349682964 0.48584616919692947 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 47007 20583 ITQTLFHIS True PC9_epitope_Rep5 1058.5760452329 1058.57494993586 84.22 2 -0.15440214063678417 0.037003488349682964 0.4858503171501386 ['ENST00000457388.1_1_10:37627086-37627398:+|nuORF'] 71361 16642 LYRLKFNEF True PC9_epitope_Rep4 1228.6604435632 1228.65934993586 71.98 2 -0.15453217669650082 0.03705844944209979 0.48627793212790893 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 118761 9747 VAAAAEILQ True H1975_Epitope_Rep3 884.49673228304 884.49618496793 42.514 1 -0.15454792510710666 0.03705844944209979 0.48632970809614806 ['ENSG00000109016|ENST00000395511|DHRS7B'] 110402 3182 TEVSKTPEA True H1975_Epitope_Rep3 960.47639076128 960.47528993586 16.846 2 -0.15456045463654502 0.03705844944209979 0.4863708995640659 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 110777 4819 TGIDRLTPK True NCI_RA007_Epitope_Rep4 999.57129420563 999.57018993586 24.97 2 -0.1546125697353213 0.03705844944209979 0.48654221345923776 ['ENST00000432366.6_2_7:86781849-86783743:+|nuORF'] 25525 15446 FEIEKRES True H1975_Epitope_Rep2 1036.5189242795998 1036.5178299358602 64.57 2 -0.15465875111012425 0.037076291600023126 0.4866939987258573 ['nc|ENSG00000080546|Q9Y6P5-3|SESN1', 'nc|ENSG00000080546|Q9Y6P5|SESN1', 'ENSG00000080546|ENST00000436639|SESN1'] 77035 6812 NRISHGEVL True PC9_epitope_Rep3 1023.5461420869499 1023.54504993586 31.221 2 -0.1546608906002969 0.037076291600023126 0.48670103010339794 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 88838 6264 QVASTLKQV True PC9_epitope_Rep2 972.5603951687598 972.55928993586 29.492 2 -0.15489653963651623 0.03722973754191236 0.48747519645581777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 69620 7677 LVDPNHSGLVT True H1975_Epitope_Rep1 1150.59823722946 1150.5971499358602 34.497 2 -0.1550469492796714 0.037267559495134404 0.487969029447464 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF'] 213 9323 AAFGGTFKKV True PC9_epitope_Rep5 1024.5705659296398 1024.56946993586 40.814 2 -0.15511788758281814 0.03730106739624677 0.4882018559378582 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 137402 16614 YEALGEII True NCI_RA007_Epitope_Rep5 906.4698488288599 906.46874993586 70.669 2 -0.15512316235335885 0.03730106739624677 0.48821916614716526 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF', 'nc|ENSG00000113391|Q8WUF8-4|ARB2A', 'nc|ENSG00000113391|Q8WUF8-3|ARB2A', 'ENSG00000113391|ENST00000395965|FAM172A', 'ENST00000504768.2_1_5:93246475-93410459:-|nuORF'] 123138 18433 VGKQGDLII True PC9_epitope_Rep2 941.5545815123298 941.55348993586 76.234 2 -0.15512894301093164 0.03730106739624677 0.4882381361900651 ['ENSG00000139344|ENST00000266736|AMDHD1'] 2150 8633 AELQQRLL True NCI_RA007_Epitope_Rep4 969.5607295219299 969.55962993586 39.99 2 -0.15515189184455894 0.03730106739624677 0.4883134425612631 ['ENSG00000174145|ENST00000309447|NWD2'] 1551 13398 AEEQPPFGVYA True H1975_Epitope_Rep1 1206.5557037111398 1206.55460993586 56.647 2 -0.15518229259578545 0.03730106739624677 0.4884131938007489 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2', 'ENST00000483432.1_1_9:140070142-140074912:-|nuORF'] 37043 8419 GVPERREP True PC9_epitope_Rep3 938.4933782380998 938.49228993586 37.349 2 -0.15520520134693436 0.03730106739624677 0.48848835578827227 ['ENST00000499900.2_1_5:177045699-177046068:+|nuORF'] 1099 11083 AEALPSLAA True NCI_RA007_Epitope_Rep3 841.4545331178899 841.45342993586 50.694 2 -0.1552103882545223 0.03730106739624677 0.4885053728962091 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 75551 18320 NLAEKLIGV True PC9_epitope_Rep4 955.5702315764698 955.56912993586 78.537 2 -0.15525963183730343 0.037315301778111695 0.4886669161636483 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 142304 13653 YYDKHFTEF True PC9_epitope_Rep5 1248.54513902744 1248.54349490379 57.539 3 -0.15529687106755985 0.037315301778111695 0.4887890622045354 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 46787 13255 ITFVAETGP True H1975_Epitope_Rep2 933.4807478657299 933.4801949679301 56.114 1 -0.15530061698567804 0.037315301778111695 0.4888013481405312 ['ENSG00000159495|ENST00000452443|TGM7'] 20373 16008 ENYTAVAQTV True PC9_epitope_Rep2 1094.5244035828598 1094.5233099358602 66.83 2 -0.1553416221773822 0.037315301778111695 0.4889358280463153 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'nc|ENSG00000101158|Q8IXH7-3|NELFCD', 'ENST00000482747.1_1_20:57556337-57564148:+|nuORF'] 59049 7630 LEVSFTEPP True H1975_Epitope_Rep3 1017.5018772331299 1017.50078993586 34.331 2 -0.15534989094373125 0.037315301778111695 0.4889629439847888 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 97474 13978 SEEFRLLN True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 58.604 2 -0.15536868915820076 0.037315301778111695 0.48902458665919757 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 66929 5169 LSNSCWSKP True NCI_RA007_Epitope_Rep3 1020.4698659121999 1020.46876993586 27.324 2 -0.15540847122387935 0.037315301778111695 0.489155026700346 ['ENSG00000118496|ENST00000237281|FBXO30'] 136878 6995 YAEFQYRRRHR True NCI_RA007_Epitope_Rep1 1580.8072759926 1580.80564490379 31.207 3 -0.15543617433728324 0.037349513628045845 0.4892458515210132 ['ENSG00000001629|ENST00000265742|ANKIB1'] 85374 10652 QEVAVKEQLT True H1975_Epitope_Rep1 1143.6135529404298 1143.61244993586 45.929 2 -0.15543953100439648 0.037349513628045845 0.4892568558177486 ['ENSG00000197892|ENST00000524189|KIF13B'] 92760 4420 RPAAQPSFHQA True PC9_epitope_Rep5 1208.6050539454 1208.60341490379 22.071 3 -0.15544795008683812 0.037349513628045845 0.48928445590489655 ['ENSG00000151929|ENST00000369085|BAG3'] 61285 17943 LIPPSLQGV True PC9_epitope_Rep6 922.5487678558999 922.54766993586 81.644 2 -0.1554894841236573 0.037349513628045845 0.48942060490975065 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 79920 21497 PEQVINNIL True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 87.98 2 -0.15550772474449295 0.037349513628045845 0.4894803920212966 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2', 'ENST00000487486.5_1_22:30188501-30200764:-|nuORF'] 119440 21395 VAQVFLAEI True PC9_epitope_Rep4 988.5593325395998 988.55822993586 90.465 2 -0.155525380694175 0.037349513628045845 0.4895382593662056 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000586702.1_1_19:11310175-11313198:-|nuORF', 'nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 54169 7277 KVSRFRIRRTP True NCI_RA007_Epitope_Rep4 1414.8633343167396 1414.86169490379 34.626 3 -0.15555051630268216 0.03736517719568567 0.48962063551145507 ['ENST00000571654.1_1_16:30666672-30667261:+|nuORF', 'ENST00000567989.1_1_16:30666816-30667629:+|nuORF', 'ENSG00000156858|ENST00000300835|PRR14'] 100672 21927 SLDLLCQIKRN True PC9_epitope_Rep5 1301.7125557890497 1301.7114499358602 89.384 2 -0.15555315660224298 0.03736517719568567 0.48962928808915834 ['ENST00000392066.7_1_2:223797982-223799297:+|nuORF'] 96634 19125 SAIETLVTA True PC9_epitope_Rep1 903.49131254943 903.49020993586 78.354 2 -0.1555702430906923 0.03736517719568567 0.489685280746408 ['nc|ENSG00000111605|Q16630-3|CPSF6', 'ENSG00000111605|ENST00000435070|CPSF6', 'nc|ENSG00000111605|Q16630-2|CPSF6'] 19280 10738 ELKKSTVIL True PC9_epitope_Rep6 1029.6433965167298 1029.6422899358602 52.125 2 -0.1555752648877909 0.03736517719568567 0.4897017366477888 ['ASPM|p.F3079L|1|0.05|ENSG00000066279|chr1:197093109-197093109|A/T|missense_variant'] 101706 19389 SLMRRQKGSL True PC9_epitope_Rep3 1174.6604606465398 1174.65880490379 79.804 3 -0.15559676451223536 0.03736517719568567 0.48977218559108593 ['MBL2|p.Q159Rfs*40|1|0.26|ENSG00000165471|chr10:52768409-52768409|G/-|frameshift_variant'] 116977 20242 TVGPLIFL True H1975_Epitope_Rep2 858.5214904789 858.5209449679301 83.884 1 -0.15566250430461778 0.037401536891165765 0.48998756770957363 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'ENST00000310842.8_1_7:76239320-76240795:-|nuORF'] 128888 8080 VQEYGELDAKG True H1975_Epitope_Rep3 1207.5720820512695 1207.57098993586 36.054 2 -0.15567182787577152 0.037401536891165765 0.4900181105841016 ['ENST00000519902.1_1_8:26237308-26237995:-|nuORF'] 55196 19337 LACALQAFSL True PC9_epitope_Rep5 1035.5423025764699 1035.54120993586 79.424 2 -0.15572332576891398 0.037401536891165765 0.4901867944201516 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 74368 9415 NERKAEVV True PC9_epitope_Rep5 943.5086939490698 943.50758993586 41.17 2 -0.15575279302581027 0.03741719303651209 0.49028330291933153 ['nc|ENSG00000110104|Q9H6F5-2|CCDC86', 'ENSG00000110104|ENST00000227520|CCDC86'] 29980 9496 FWQFQRRVKH True NCI_RA007_Epitope_Rep4 1430.76837130274 1430.7667349037902 43.377 3 -0.15579164628525302 0.03741719303651209 0.49041053719712946 ['ENSG00000187980|ENST00000679259|PLA2G2C'] 120009 13397 VDRGMQVL True PC9_epitope_Rep3 916.48003667308 916.47892993586 56.562 2 -0.15579455744031329 0.03741719303651209 0.4904200698088578 ['SDR9C7|p.A55S|1|0.17|ENSG00000170426|chr12:56934099-56934099|C/A|missense_variant', 'ENSG00000170426|ENST00000293502|SDR9C7'] 49149 3025 KELEKTYSA True NCI_RA007_Epitope_Rep2 1067.54989005471 1067.5487899358602 16.337 2 -0.15581009331311116 0.03741719303651209 0.4904709406491342 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 30065 15772 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6166049037902 72.91 3 -0.15581283961855236 0.03741719303651209 0.490479932909939 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 133442 7838 VVWQRRHAR True PC9_epitope_Rep6 1206.68464167878 1206.6829949037901 39.544 3 -0.15591992369196137 0.03743356697219441 0.4908304954226842 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 142305 8394 YYDPHQATF True NCI_RA007_Epitope_Rep4 1140.48762415132 1140.48652993586 39.103 2 -0.15595560843163792 0.03743356697219441 0.4909472891555424 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 110448 20486 TFDDITVYL True H1975_Epitope_Rep1 1085.52809198097 1085.52698993586 85.202 2 -0.1559765812476317 0.03743356697219441 0.49101592524342985 ['ZNF862|p.I1034Sfs*13|1|0.16|ENSG00000106479|chr7:149862257-149862257|C/-|frameshift_variant', 'ENSG00000106479|ENST00000223210|ZNF862', 'ZNF862|p.P510Lfs*7|1|0.09|ENSG00000106479|chr7:149860684-149860684|G/-|frameshift_variant', 'ENST00000489820.5_1_7:149535487-149541977:+|nuORF'] 24586 16418 FAIDPHLLL True NCI_RA007_Epitope_Rep3 1037.59096702105 1037.5898699358602 72.327 2 -0.15600207414415335 0.03743356697219441 0.4910993473385306 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 58312 4917 LEMEDQKNS True H1975_Epitope_Rep2 1092.47573913828 1092.47464993586 23.995 2 -0.15600856419525225 0.037451380598451885 0.4911205840219391 ['nc|ENSG00000009790|Q9Y228-3|TRAF3IP3', 'nc|ENSG00000009790|Q9Y228-2|TRAF3IP3', 'ENSG00000009790|ENST00000367025|TRAF3IP3', 'ENST00000476050.5_1_1:209941981-209948930:+|nuORF'] 57806 7337 LEERTPPVP True H1975_Epitope_Rep3 1036.5553097883198 1036.5542099358602 33.198 2 -0.1560111386768502 0.037451380598451885 0.4911290080877547 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 35168 17296 GQWYGPNTV True PC9_epitope_Rep5 1020.4664947839199 1020.46597496793 71.535 1 -0.1561811438518585 0.03746991431597189 0.4916851270527507 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 86701 18650 QLKDIFSEV True PC9_epitope_Rep4 1077.57062549929 1077.5695299358601 79.814 2 -0.1562306724350782 0.037506979609912006 0.491847084161271 ['ENSG00000177613|ENST00000331173|CSTF2T', 'nc|ENSG00000101811|P33240-2|CSTF2', 'ENSG00000101811|ENST00000372972|CSTF2'] 113215 10386 TLQKEGVIGV True PC9_epitope_Rep4 1042.6022599807397 1042.60116993586 47.651 2 -0.15623968407522693 0.037506979609912006 0.49187654904407335 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 103122 7182 SPHPGLVAA True PC9_epitope_Rep5 847.4552018242299 847.45410993586 32.591 2 -0.1563399216482018 0.0375440420493271 0.49220422947491604 ['ENSG00000100393|ENST00000263253|EP300'] 127 19717 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.50506993586 82.569 2 -0.15634835419431295 0.0375440420493271 0.49223179066880157 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 44090 9605 IINEPTAAA True PC9_epitope_Rep3 898.4759968384599 898.47488993586 41.897 2 -0.15641091033741977 0.03758037811405029 0.4924362262152569 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 116680 18389 TVCGYYTSV True PC9_epitope_Rep1 991.4320834211501 991.43098993586 75.524 2 -0.15641299007526258 0.03758037811405029 0.49244302211324437 ['ENSG00000244234|ENST00000463439|GMCL2'] 8524 18997 ATSVTFVGV True PC9_epitope_Rep2 879.4701831820299 879.46963496793 78.438 1 -0.15641701394489602 0.03758037811405029 0.49245617065537545 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 107802 18328 SVTNSLIAV True PC9_epitope_Rep4 902.5072969667399 902.50618993586 78.567 2 -0.156490214009655 0.03761743415986447 0.4926953300499897 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR', 'RICTOR|p.L717Qfs*8|1|0.15|ENSG00000164327|chr5:38959219-38959223|GGAAA/-|frameshift_variant', 'nc|ENSG00000164327|Q6R327-4|RICTOR', 'ENST00000513566.1_1_5:38981926-39074494:-|nuORF', 'ENST00000510711.5_1_5:38971963-39074479:-|nuORF'] 114953 10037 TQVEASEESAL True PC9_epitope_Rep6 1162.5353621893798 1162.53426993586 49.183 2 -0.15650299153071165 0.03761743415986447 0.49273707060561345 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 103205 18201 SPISSLYQA True PC9_epitope_Rep5 964.4865615221601 964.48546993586 75.021 2 -0.15655194246011375 0.037635961112715374 0.4928969624287404 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'DYNC2H1|p.G2197Wfs*36|1|0.44|ENSG00000187240|chr11:103185004-103185005|-/T|frameshift_variant', 'nc|ENSG00000187240|Q8NCM8-3|DYNC2H1'] 8631 18405 AVAAVLTQV True PC9_epitope_Rep3 870.5174677276199 870.51636993586 76.002 2 -0.1565851242967468 0.03765303765303765 0.49300533116835926 ['ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 137601 6329 YEESQSRLN True H1975_Epitope_Rep2 1124.5098161478797 1124.50870993586 29.277 2 -0.15661997027364905 0.03765303765303765 0.4931191214142548 ['nc|ENSG00000002079|Q9H6N6|MYH16'] 100536 7056 SLAVQGGK True PC9_epitope_Rep3 758.4286527232199 758.42754993586 32.151 2 -0.15662323202228326 0.03765303765303765 0.49312977201636643 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 142664 21415 YYPNPPLVL True PC9_epitope_Rep2 1074.57498260374 1074.57447496793 87.845 1 -0.1566307690355702 0.03767011222113145 0.4931543821973572 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 7049 8061 AQQPHIAGV True PC9_epitope_Rep1 919.4875645816699 919.48646993586 35.829 2 -0.15663474979898215 0.03767011222113145 0.49316738009776073 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 2997 15766 AFIEKHWTF True PC9_epitope_Rep4 1177.59202965021 1177.59092993586 68.566 2 -0.15666504507870377 0.03767011222113145 0.4932662936798464 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 6298 14311 APRLLLAA True PC9_epitope_Rep3 823.5279728416699 823.52686993586 60.134 2 -0.1566999914130988 0.03768863566368956 0.4933803799246199 ['ENST00000552138.5_1_14:105821400-105836438:+|nuORF'] 109319 15674 TAYDNFVEL True NCI_RA007_Epitope_Rep5 1070.49204082542 1070.49094993586 67.005 2 -0.15691386443100025 0.037783423797975134 0.49407828887951394 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 92616 6840 RNAGDEVTI True PC9_epitope_Rep1 973.48287312405 973.48176993586 31.116 2 -0.15694994609845472 0.037783423797975134 0.4941959786552683 ['ENSG00000172554|ENST00000308624|SNTG2'] 72065 9870 MEVDTTPTV True H1975_Epitope_Rep3 991.45321278855 991.45210993586 42.993 2 -0.15708547709470047 0.037859686266961796 0.4946379143488658 ['ENSG00000074201|ENST00000525428|CLNS1A', 'ENST00000503181.1_1_4:170754403-170754511:+|nuORF'] 127671 10449 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.4914349679301 45.08 1 -0.1571385187151929 0.03787747560482707 0.4948108131585949 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 111235 7268 THIVGTEV True PC9_epitope_Rep2 854.4497820906199 854.44868993586 33.344 2 -0.15714774449608773 0.03787747560482707 0.49484088293854284 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 129020 22725 VQLQDYIQL True PC9_epitope_Rep1 1118.5971746003 1118.5960699358602 92.216 2 -0.15724910537196155 0.037913779830638955 0.49517118540249283 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant'] 29916 16648 FVWSGTAEA True PC9_epitope_Rep6 966.4446967101799 966.44358993586 76.505 2 -0.15725147190489663 0.037913779830638955 0.4951788957423403 ['ENSG00000124422|ENST00000261497|USP22'] 7031 6665 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep1 935.4348606187698 935.43376993586 29.937 2 -0.1572788817122481 0.037913779830638955 0.495268194167081 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 6261 14698 APRAALVFA True PC9_epitope_Rep5 914.5337864980999 914.53268993586 61.539 2 -0.157316536363164 0.037950810207459294 0.49539085496742735 ['ENSG00000170006|ENST00000304385|TMEM154'] 139443 19097 YLPPGFLSA True PC9_epitope_Rep6 963.50656869075 963.50546993586 86.105 2 -0.15731794161496748 0.037950810207459294 0.495395432283295 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 118376 6248 TYNQKHSLF True NCI_RA007_Epitope_Rep4 1136.5614577979202 1136.55982490379 30.638 3 -0.15740404098254213 0.03796713235577108 0.49567583897536993 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 16733 8079 EESPPGLTA True H1975_Epitope_Rep3 899.4236269124299 899.42252993586 36.05 2 -0.15748898302756018 0.03796713235577108 0.49595239123942836 ['ENST00000280098.8_1_2:139259536-139307756:+|nuORF'] 118729 18621 TYVFNIIF True NCI_RA007_Epitope_Rep3 1015.5378688190299 1015.53676993586 81.479 2 -0.1575139737438388 0.03796713235577108 0.4960337392388193 ['ENSG00000121743|ENST00000241125|GJA3'] 111417 8729 THSLTTPVV True PC9_epitope_Rep6 953.51819600361 953.51708993586 43.443 2 -0.15751683690875032 0.03796713235577108 0.49604305873903987 ['nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'ENSG00000116604|ENST00000348159|MEF2D'] 76733 17771 NQVALPNI True PC9_epitope_Rep4 867.48141657207 867.48030993586 76.385 2 -0.15753549637068245 0.037984913793103446 0.4961037922561209 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 19365 18933 ELLLVVLSHV True PC9_epitope_Rep2 1120.6855956818802 1120.68448993586 78.19 2 -0.15754014274567193 0.037984913793103446 0.4961189148126596 ['ENSG00000161243|ENST00000292853|FBXO27'] 87139 4971 QPATATAATAA True PC9_epitope_Rep1 972.4876241513199 972.48652993586 23.98 2 -0.15758004824215302 0.038003425118820836 0.49624878472722594 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 112539 21818 TLEDIEIIQ True PC9_epitope_Rep4 1072.5652057656798 1072.5641099358602 92.118 2 -0.15766644493941553 0.038021935732153164 0.49652989272372966 ['ENST00000456360.5_1_Y:23556925-23559248:-|nuORF'] 43248 10451 IFNPVSKNF True NCI_RA007_Epitope_Rep3 1064.5654805492002 1064.5643899358602 48.172 2 -0.1577003304404994 0.03804044563314156 0.49664012142959135 ['ENST00000589391.5_1_2:179401165-179403504:+|nuORF', 'ENST00000415561.1_1_2:179402212-179403504:+|nuORF', 'ENST00000588244.5_1_2:179402120-179403504:+|nuORF', 'ENST00000419746.5_1_2:179402219-179403504:+|nuORF', 'ENST00000589434.5_1_2:179388144-179403504:+|nuORF'] 191 12812 AAEPGNLAGV True PC9_epitope_Rep2 897.4555957470499 897.45448993586 54.583 2 -0.1578152283576462 0.03805895482182714 0.4970137797769687 ['ENSG00000095906|ENST00000262302|NUBP2', 'ENST00000566447.5_1_16:1832991-1836957:+|nuORF', 'ENST00000566090.5_1_16:1832991-1836988:+|nuORF'] 24554 13032 FAGM[Oxidation]PITL True H1975_Epitope_Rep1 864.44152628648 864.4409749679301 55.212 1 -0.1578647826104935 0.03807160308574287 0.4971748860077086 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 6507 7392 APTAITEA True PC9_epitope_Rep4 772.3966838886 772.39558993586 35.778 2 -0.15793179983581493 0.03807160308574287 0.4973927194555336 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 37703 10152 GVYNGKTFNQV True PC9_epitope_Rep4 1225.60913626633 1225.60802993586 46.726 2 -0.15794851386739392 0.03807160308574287 0.49744703850956634 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 121251 4533 VETFGGLK True NCI_RA007_Epitope_Rep3 849.4596184983299 849.45852993586 24.698 2 -0.15797446379321392 0.03807160308574287 0.4975313667097815 ['COL6A6|p.D2019Rfs*12|1|0.45|ENSG00000206384|chr3:130661854-130661855|-/C|frameshift_variant', 'ENSG00000206384|ENST00000358511|COL6A6', 'COL6A6|p.D1304Vfs*12|1|0.12|ENSG00000206384|chr3:130582008-130582009|-/TAGATCTCAAACTTGGGAGAAT|frameshift_variant', 'COL6A6|p.D1304Lfs*23|1|0.12|ENSG00000206384|chr3:130582007-130582008|-/CT|frameshift_variant', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6'] 142293 8790 YYDKHFTEF True NCI_RA007_Epitope_Rep4 1248.54513902744 1248.5440499358601 40.621 2 -0.15797651890158615 0.03807160308574287 0.49753804474844215 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 52883 11501 KPFKEFVEA True PC9_epitope_Rep3 1093.5807962601698 1093.5796899358602 49.24 2 -0.15798098079852108 0.03807160308574287 0.4975525434294166 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 18876 9943 ELDSDSEDLDP True PC9_epitope_Rep1 1233.48847156661 1233.4873699358602 43.108 2 -0.15800992232625816 0.03807160308574287 0.4976465814620689 ['ENSG00000198816|ENST00000597229|ZNF358'] 55412 12928 LAEVVAVR True PC9_epitope_Rep5 855.5178020807898 855.51670993586 54.739 2 -0.15801482429922212 0.03807160308574287 0.49766250816010366 ['ENST00000601500.1_1_5:50674700-50674763:-|nuORF'] 83022 21134 PSIFVAGLV True PC9_epitope_Rep4 901.5273041353298 901.5267549679301 89.454 1 -0.1580288527030915 0.03807160308574287 0.4977080853812554 ['ENSG00000158683|ENST00000289672|PKD1L1'] 9258 19406 AVPEVAVYL True PC9_epitope_Rep6 959.5327834385898 959.53168993586 87.301 2 -0.1580957808891812 0.03810348143873822 0.49792549728790575 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 81800 17767 PLPPPLPPP True PC9_epitope_Rep4 923.54803957991 923.54694993586 76.367 2 -0.15811260363681856 0.03810348143873822 0.4979801363869254 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 65390 12426 LREERAYIL True PC9_epitope_Rep5 1161.6506071554898 1161.6495099358601 52.796 2 -0.15815376857291624 0.03810348143873822 0.49811382274798877 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 37076 21384 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49014993586 87.725 2 -0.15817736903693438 0.03810348143873822 0.4981904578433418 ['ENSG00000010292|ENST00000315579|NCAPD2'] 17690 20564 EHLTMLQVL True PC9_epitope_Rep5 1082.57941636118 1082.57830993586 84.144 2 -0.15822181122746803 0.03810348143873822 0.4983347515443152 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 96712 16013 SALNEVHLV True PC9_epitope_Rep3 980.52909504048 980.52798993586 66.74 2 -0.15822811238672344 0.03810348143873822 0.4983552080346558 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 103118 5983 SPHPGLVAA True PC9_epitope_Rep2 847.4552018242299 847.45410993586 28.401 2 -0.15823234887599155 0.03810348143873822 0.49836896137552833 ['ENSG00000100393|ENST00000263253|EP300'] 107828 18530 SVVDGTPLV True PC9_epitope_Rep2 885.48074786573 885.4801949679301 76.625 1 -0.15823629956794222 0.03810348143873822 0.4983817867071083 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 20469 21833 EPIPYEFMA True PC9_epitope_Rep1 1095.49468367771 1095.4935899358602 88.79 2 -0.15824154343141633 0.03810348143873822 0.49839880983364615 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 72 12986 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44794993586 55.184 2 -0.15830025508065218 0.03815824902873408 0.4985893822876348 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 48931 11557 KEEEERWRRKV True NCI_RA007_Epitope_Rep1 1543.8219229972296 1543.8202649037903 48.923 3 -0.15832015589506773 0.03815824902873408 0.498653968908929 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4'] 19934 14144 ELVIHRLEAD True PC9_epitope_Rep4 1193.6404363946099 1193.6393299358601 62.309 2 -0.15835748173853356 0.03815824902873408 0.4987750941294395 ['nc|ENSG00000141577|Q9UPN4-3|CEP131', 'ENSG00000141577|ENST00000450824|CEP131', 'nc|ENSG00000141577|Q9UPN4|CEP131'] 139517 15520 YLSPDLSKV True PC9_epitope_Rep5 1020.54916177872 1020.54806993586 64.707 2 -0.15835998682193544 0.03815824902873408 0.4987832227071014 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000445336.2_1_X:74804463-74804925:+|nuORF', 'ENST00000479537.5_1_7:140434399-140447180:-|nuORF'] 114707 13850 TQIDHYVGI True PC9_epitope_Rep4 1044.52400966004 1044.52347496793 61.175 1 -0.1584712052873765 0.0381767477642081 0.4991440306057922 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 117648 14180 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.5067449679301 59.365 1 -0.15856311232935838 0.03818863570810499 0.4994420749418136 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 105009 12883 SRDKTIIMW True PC9_epitope_Rep6 1148.60121443492 1148.59957490379 61.079 3 -0.15859253003065832 0.03818863570810499 0.4995374512888928 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 2149 15837 AELQPLFAD True H1975_Epitope_Rep2 1002.5022115862998 1002.50110993586 66.109 2 -0.158609568642098 0.03818863570810499 0.49959268798934986 ['ENSG00000179044|ENST00000314586|EXOC3L1'] 68094 4692 LTDNGRHITY True H1975_Epitope_Rep3 1188.58873517492 1188.5876299358601 23.171 2 -0.1586323497604968 0.03818863570810499 0.49966653545629175 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.A516Qfs*19|1|0.53|ENSG00000103197|chr16:2064373-2064373|G/-|frameshift_variant'] 71171 17798 LYMPKLLYF True NCI_RA007_Epitope_Rep4 1186.6460393690197 1186.64494993586 77.061 2 -0.1586695928170879 0.03818863570810499 0.49978724903524174 ['nc|ENSG00000170786|Q8N3Y7-2|SDR16C5', 'ENSG00000170786|ENST00000303749|SDR16C5'] 61651 8317 LKQYENLIL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64755490379 39.833 3 -0.15873072455578802 0.03818863570810499 0.4999853542317712 ['ENSG00000187823|ENST00000695839|RTL4'] 128802 13230 VQADNIRSL True PC9_epitope_Rep3 1014.54580773378 1014.5447099358599 55.924 2 -0.15879779513239395 0.03818863570810499 0.5002026515842577 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 28014 11842 FQNESAAAL True PC9_epitope_Rep2 949.4505103666098 949.44940993586 50.879 2 -0.1588607298871257 0.03818863570810499 0.5004064986204 ['ENSG00000198700|ENST00000361565|IPO9'] 113912 5945 TNRPPLSLSR True PC9_epitope_Rep4 1139.64110510095 1139.63944490379 29.797 3 -0.1588726046902263 0.03818863570810499 0.5004449558224553 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 126035 16537 VLEAEQNSL True PC9_epitope_Rep3 1001.50293986229 1001.50184993586 68.749 2 -0.15887789172396694 0.03818863570810499 0.5004620776048462 ['ENST00000465425.1_1_19:36497111-36499583:-|nuORF', 'ENSG00000181392|ENST00000324444|SYNE4'] 126468 6708 VLLGETGK True PC9_epitope_Rep3 815.47526856247 815.47416993586 30.825 2 -0.15911789890879405 0.03827962777820503 0.5012389592922184 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 24590 21737 FAIDPHLLL True PC9_epitope_Rep2 1037.59096702105 1037.5898699358602 89.089 2 -0.1591509574851595 0.03827962777820503 0.501345910131954 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 134524 5147 VYQNHVQHL True PC9_epitope_Rep5 1136.57269118796 1136.5710449037902 24.82 3 -0.15916422451099432 0.03827962777820503 0.5013888276246816 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 124265 21045 VGTLAVVLG True PC9_epitope_Rep5 827.5116540711899 827.51110496793 86.009 1 -0.15916965001056285 0.03827962777820503 0.501406377928425 ['ENSG00000146360|ENST00000275169|GPR6', 'nc|ENSG00000146360|P46095-2|GPR6'] 36798 14418 GVLDKLRSV True PC9_epitope_Rep2 985.59202965021 985.59092993586 60.727 2 -0.1592075162162037 0.03827962777820503 0.5015288564465105 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 22132 7169 ESRKDMVV True PC9_epitope_Rep2 962.4855159763399 962.48440993586 32.966 2 -0.1592112130554542 0.03827962777820503 0.5015408129273812 ['ENSG00000106038|ENST00000496902|EVX1'] 58978 10843 LEVDPPVAA True H1975_Epitope_Rep2 909.4807478657299 909.4801949679301 46.736 1 -0.15930442233904907 0.03827962777820503 0.5018422172305482 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 31429 4712 GEAGTPVAA True H1975_Epitope_Rep2 771.3762827971899 771.37573496793 23.215 1 -0.15941361921252464 0.03833656970372792 0.5021951789252126 ['ENSG00000105245|ENST00000252891|NUMBL'] 78492 8656 NYNNQSSNF True PC9_epitope_Rep5 1086.4366512076201 1086.43607496793 38.239 1 -0.1594805383106796 0.03837428384665667 0.5024114091507842 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 103290 5597 SPLNTPHTSA True PC9_epitope_Rep3 1023.4985231881901 1023.4974299358599 26.606 2 -0.1594891579971844 0.038392033220547524 0.50243925707499 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 43403 11721 IGELIM[Oxidation]IKFK True NCI_RA007_Epitope_Rep1 1206.70461725474 1206.7035099358602 49.569 2 -0.1594952976734326 0.038392033220547524 0.5024590921624554 ['ENSG00000166035|ENST00000299022|LIPC'] 54515 15465 KYIEGVSDF True PC9_epitope_Rep5 1056.51277627 1056.51227496793 64.498 1 -0.15951292247838234 0.03840904284972799 0.5025160288892659 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 138088 15848 YGGLIFNSY True H1975_Epitope_Rep1 1032.4916469026 1032.4905499358601 66.267 2 -0.15951559786251054 0.03840904284972799 0.5025246713383417 ['ENSG00000198712|ENST00000361739|MT-CO2'] 91536 17916 RIGDPQLVI True PC9_epitope_Rep5 1009.5920296502098 1009.59092993586 73.932 2 -0.15951623484681043 0.03840904284972799 0.5025267290122737 ['nc|ENSG00000154027|Q9Y6K8-3|AK5', 'ENSG00000154027|ENST00000354567|AK5', 'nc|ENSG00000154027|Q9Y6K8-2|AK5'] 98642 16085 SFYPEEVSSI True PC9_epitope_Rep3 1156.52882025696 1156.5277299358602 67.019 2 -0.15962247319732514 0.03844675124951941 0.5028698417730764 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 6088 12484 APLRLIAA True PC9_epitope_Rep4 823.5279728416699 823.52686993586 55.826 2 -0.1597380591328163 0.038463756415431635 0.5032429788357176 ['ENSG00000112159|ENST00000369393|MDN1'] 57623 8090 LEEEDTGDDP True PC9_epitope_Rep1 1118.4251430340598 1118.42404993586 35.942 2 -0.1598093584795445 0.038463756415431635 0.5034730628042109 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D'] 40055 9471 HPTLITHW True PC9_epitope_Rep5 1003.5239500903901 1003.52284993586 41.387 2 -0.15982808392682776 0.038463756415431635 0.5035334791499315 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 66317 13574 LSFTQQGW True PC9_epitope_Rep1 965.46068112749 965.45958993586 57.068 2 -0.159953571527942 0.038499240778826375 0.5039382384551397 ['ENSG00000184178|ENST00000401642|SCFD2', 'nc|ENSG00000184178|Q8WU76-2|SCFD2', 'SCFD2|p.Q16L|2|0.16|ENSG00000184178|chr4:53365895-53365895|T/A|missense_variant'] 16150 2767 EEDEKWKMSP True H1975_Epitope_Rep2 1277.55980311541 1277.55814490379 14.672 3 -0.15997813396710178 0.038499240778826375 0.5040174404002177 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 76421 21333 NQDNLQLFL True PC9_epitope_Rep4 1103.5611234447501 1103.56002993586 90.226 2 -0.15998094158665455 0.038499240778826375 0.5040264931088738 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 12697 13322 DLDTALPGT True PC9_epitope_Rep3 901.4392769765699 901.43816993586 56.277 2 -0.1600207163341283 0.038499240778826375 0.5041547291885727 ['ENSG00000269855|ENST00000601382|RNF225'] 117847 17939 TVYEGFISA True PC9_epitope_Rep6 985.4756624852898 985.47511496793 81.629 1 -0.1600656734458622 0.0385177212270316 0.5042996485868962 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 72224 7093 MHDGNVITA True PC9_epitope_Rep1 956.43856578392 956.43746993586 32.092 2 -0.160124561538989 0.03853620096484653 0.5044894344650185 ['ENST00000553691.5_1_14:77907431-77919723:-|nuORF', 'ENSG00000151445|ENST00000557658|VIPAS39', 'ENST00000555854.1_1_14:77906782-77910618:-|nuORF', 'nc|ENSG00000151445|Q9H9C1-2|VIPAS39'] 70138 14697 LVPPDQPEV True PC9_epitope_Rep1 992.51786165044 992.51676993586 61.352 2 -0.16026629323564792 0.03857093438905331 0.5049460235998176 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 36142 18505 GVAPGFQVV True PC9_epitope_Rep4 872.4756029156399 872.4750549679301 79.252 1 -0.1602760967968346 0.03857093438905331 0.5049775960089985 ['ENSG00000165724|ENST00000298585|ZMYND19'] 2846 5673 AEVEGRALP True H1975_Epitope_Rep2 940.4977949121998 940.49668993586 26.818 2 -0.16031356904135402 0.03857093438905331 0.5050982638165886 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF', 'nc|ENSG00000159788|O14924-7|RGS12', 'nc|ENSG00000159788|O14924-6|RGS12', 'nc|ENSG00000159788|O14924-2|RGS12', 'nc|ENSG00000159788|O14924-3|RGS12', 'nc|ENSG00000159788|O14924-5|RGS12', 'nc|ENSG00000159788|O14924-4|RGS12', 'ENSG00000159788|ENST00000336727|RGS12', 'ENST00000506998.5_1_4:3371967-3419414:+|nuORF'] 74944 19597 NHLREIWEL True PC9_epitope_Rep3 1208.6302060640799 1208.62855490379 80.618 3 -0.16032118191504205 0.03857093438905331 0.5051227764581752 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'ENST00000555791.5_1_15:91527220-91537794:-|nuORF'] 12054 7496 DHSVAESL True PC9_epitope_Rep4 856.3926611373201 856.39156993586 36.196 2 -0.1603584867074573 0.03857093438905331 0.50524288281616 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 101912 15735 SLPTAPLAP True PC9_epitope_Rep6 865.49091862661 865.48982993586 72.75 2 -0.16040748969531612 0.03860862880753339 0.5054006245958157 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 14069 5476 DRQQMEAL True PC9_epitope_Rep4 989.4600295044899 989.4589299358599 27.812 2 -0.16042035250909095 0.03862636201164556 0.5054420250155299 ['ENSG00000105472|ENST00000250340|CLEC11A'] 31632 13275 GEFGGFGSV True NCI_RA007_Epitope_Rep4 855.3762827971899 855.37518993586 58.197 2 -0.16042366116819176 0.03862636201164556 0.5054526739532429 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 74752 15990 NHASLISAL True PC9_epitope_Rep1 924.50288029264 924.5023349679301 66.316 1 -0.1604413212193771 0.038644093852687404 0.5055095104647086 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 125150 15147 VIGPPVVL True H1975_Epitope_Rep2 792.5109257952 792.51037496793 63.417 1 -0.16046085514026837 0.038644093852687404 0.5055723729431406 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 1702 8926 AEGMPPMQA True H1975_Epitope_Rep2 930.3939240906199 930.3933749679301 39.297 1 -0.16046908131265075 0.03866256725595696 0.505598844223688 ['nc|ENSG00000170265|Q9UDV7-2|ZNF282', 'ENSG00000170265|ENST00000610704|ZNF282'] 41676 19383 IAGPGLPDL True PC9_epitope_Rep5 851.47526856247 851.47472496793 79.602 1 -0.16054257927319085 0.03868103994927077 0.5058353157939813 ['nc|ENSG00000284922|Q8WZ04-2|TOMT', 'nc|ENSG00000284922|Q8WZ04|TOMT'] 58629 15554 LERALQASL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 64.652 2 -0.16061640765473165 0.038696537678207736 0.5060727778380308 ['ENST00000473218.5_1_2:227771569-227779114:+|nuORF', 'nc|ENSG00000144468|Q8TEB9-2|RHBDD1', 'ENST00000493526.1_1_2:227773206-227860235:+|nuORF', 'ENST00000491490.5_1_2:227771589-227860235:+|nuORF', 'ENSG00000144468|ENST00000392062|RHBDD1'] 75735 22513 NLLDLLTEV True PC9_epitope_Rep6 1028.57537652656 1028.57426993586 99.6 2 -0.1606336434843302 0.038696537678207736 0.5061282047611517 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 36286 11764 GVEAGPDLLQ True H1975_Epitope_Rep3 997.5080252427299 997.5074749679301 50.394 1 -0.16070272975880703 0.038696537678207736 0.506350332188684 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 23331 12340 EVRAQYEEI True PC9_epitope_Rep4 1135.5509526838698 1135.54984993586 55.274 2 -0.16075011870203915 0.038696537678207736 0.5065026608990155 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'CON__Q9R0H5'] 32832 17215 GHLYTVPI True PC9_epitope_Rep1 898.4912529797799 898.49014993586 71.035 2 -0.16075579763560466 0.038696537678207736 0.5065209134386297 ['ENSG00000105974|ENST00000341049|CAV1', 'ENST00000489856.1_1_7:116165116-116166890:+|nuORF'] 80472 14207 PGLELPLMMAK True PC9_epitope_Rep3 1198.64538774602 1198.6442899358601 59.735 2 -0.1607750478925864 0.03871351995235259 0.5065827820493498 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'ENST00000472686.1_1_17:74309820-74324990:-|nuORF'] 33423 7778 GLAEVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44286993586 37.719 2 -0.1607806910002558 0.03871351995235259 0.5066009175484635 ['ENSG00000170684|ENST00000303809|ZNF296'] 140853 16397 YSDSFPMEL True H1975_Epitope_Rep3 1087.45321278855 1087.45210993586 68.545 2 -0.1607915380306275 0.03871351995235259 0.5066357759137117 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 68219 5704 LTEAAPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 26.937 2 -0.16086253066803086 0.03873198847262248 0.5068638809409414 ['ENSG00000188766|ENST00000691638|SPRED3'] 3939 15274 AHDDSVMYL True PC9_epitope_Rep5 1049.44879611445 1049.4476899358601 63.761 2 -0.16091408707805668 0.03876743381872671 0.5070294931204046 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 28030 19546 FQPPPGVNI True PC9_epitope_Rep2 967.5127167003499 967.51160993586 80.567 2 -0.16092823529154066 0.03876743381872671 0.5070749344545606 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 103461 8813 SPPVPGPSA True PC9_epitope_Rep3 807.41266830591 807.41156993586 38.849 2 -0.16094228174593367 0.03876743381872671 0.5071200462746859 ['ENSG00000143756|ENST00000366862|FBXO28'] 15189 5993 EAAYQVRE True NCI_RA007_Epitope_Rep5 964.4614094034798 964.46030993586 29.736 2 -0.16098649101448861 0.03876743381872671 0.5072620120099913 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 37704 11558 GVYNGKTFNQV True PC9_epitope_Rep5 1225.60913626633 1225.60802993586 49.454 2 -0.1610196701986774 0.03878589952934396 0.5073685402716113 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 54382 10289 KYFDEHYEY True PC9_epitope_Rep6 1292.53496826656 1292.5338699358601 50.265 2 -0.1610498867430542 0.03880361910982193 0.5074655433741972 ['ENSG00000123975|ENST00000314355|CKS2'] 98548 21330 SFPLDIGSV True PC9_epitope_Rep3 933.48074786573 933.47964993586 87.342 2 -0.16106606623814093 0.03880361910982193 0.5075174787254662 ['ENSG00000130052|ENST00000374599|STARD8', 'STARD8|p.A398Hfs*61|1|0.27|ENSG00000130052|chrX:68718345-68718345|G/-|frameshift_variant', 'STARD8|p.E40Kfs*44|1|0.58|ENSG00000130052|chrX:68717271-68717271|G/-|frameshift_variant'] 41368 16412 HYAALAHYF True PC9_epitope_Rep1 1091.51886470995 1091.51776993586 67.952 2 -0.16108399341568763 0.03881984594994334 0.5075750198832277 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF'] 25387 9290 FEDAERPFP True NCI_RA007_Epitope_Rep2 1106.50327421546 1106.5021699358601 40.745 2 -0.16111527037632473 0.03881984594994334 0.507675399569024 ['ENST00000369681.9_1_6:84569383-84569569:+|nuORF'] 27460 13864 FMCVCCQELVY True H1975_Epitope_Rep2 1336.5324087927202 1336.53130993586 58.473 2 -0.1611217501558577 0.03881984594994334 0.507696193981876 ['ENSG00000147854|ENST00000276893|UHRF2'] 103112 6917 SPHLGPAPA True PC9_epitope_Rep3 845.4395517600899 845.43844993586 31.619 2 -0.16116562542407822 0.03881984594994334 0.5078369800494376 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 110980 5297 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 25.762 2 -0.16124075934394436 0.038876723906111944 0.5080780070846215 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 33420 8282 GLAEVAAAV True H1975_Epitope_Rep3 799.4439684341899 799.44286993586 36.84 2 -0.1612937780086219 0.03891439217870657 0.5082480425683217 ['ENSG00000170684|ENST00000303809|ZNF296'] 109649 15385 TEAPPIIFA True H1975_Epitope_Rep2 957.5171333744499 957.51602993586 64.337 2 -0.16141257699804382 0.038968272259353155 0.5086289009493787 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 103250 14003 SPLHLAVEA True PC9_epitope_Rep5 935.5076313199099 935.50652993586 58.882 2 -0.16142649590437458 0.038968272259353155 0.5086735109225623 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 8954 13881 AVGDLAAV True NCI_RA007_Epitope_Rep2 714.39120458534 714.39065496793 58.646 1 -0.16142787699458105 0.038968272259353155 0.5086779371587405 ['ENSG00000162460|ENST00000375782|TMEM82'] 86135 7488 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep2 1118.4736312427299 1118.4725299358602 33.752 2 -0.161458781045199 0.038968272259353155 0.5087769742154876 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 133837 12348 VYGGGAAEI True PC9_epitope_Rep1 835.4075829254699 835.40648993586 52.353 2 -0.16145905074353467 0.038968272259353155 0.5087778384495759 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 107277 19954 SVLDDNKLLTL True PC9_epitope_Rep4 1229.68671788069 1229.68617496793 84.887 1 -0.16151018931382144 0.038976249447996464 0.5089416911159006 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 472 17802 [Acetylation]-AALTTLFK True H1975_Epitope_Rep3 905.52221907119 905.52167496793 74.471 1 -0.16151243852628572 0.038976249447996464 0.5089488969676453 ['nc|ENSG00000133313|Q96KP4-2|CNDP2', 'ENSG00000133313|ENST00000324262|CNDP2', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 14359 4306 DSYVGDEAQSK True PC9_epitope_Rep6 1197.51496109797 1197.5138699358602 23.602 2 -0.16152412725434187 0.038976249447996464 0.5089863432758319 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 22133 6812 ESRKDMVV True PC9_epitope_Rep4 962.4855159763399 962.48440993586 33.417 2 -0.16155129141861632 0.038976249447996464 0.5090733597726556 ['ENSG00000106038|ENST00000496902|EVX1'] 137119 19793 YASNFSVI True PC9_epitope_Rep5 899.4388830537499 899.43833496793 81.179 1 -0.16155923750451037 0.038976249447996464 0.5090988119822782 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000515868.5_1_4:845337-862348:-|nuORF', 'ENST00000509566.1_1_4:844107-866085:-|nuORF', 'ENST00000511345.5_1_4:845337-845877:-|nuORF'] 25870 15237 FFIRQNKTNSI True PC9_epitope_Rep3 1366.7357337617798 1366.73407490379 63.757 3 -0.1615791798569076 0.038976249447996464 0.509162685727531 ['nc|ENSG00000057149|P29508-2|SERPINB3', 'ENSG00000206073|ENST00000341074|SERPINB4', 'ENSG00000057149|ENST00000283752|SERPINB3'] 36697 21199 GVISGLFEL True PC9_epitope_Rep6 933.5171333744499 933.51602993586 94.39 2 -0.16158885788401658 0.038976249447996464 0.5091936816770538 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 93849 13595 RRDRIVVVL True PC9_epitope_Rep1 1124.71421047156 1124.71255490379 57.148 3 -0.16164771681569853 0.038976249447996464 0.5093821619435329 ['WDR45B|p.S248Qfs*12|1|0.29|ENSG00000141580|chr17:82617359-82617360|GA/-|frameshift_variant', 'WDR45B|p.S249Afs*89|1|0.29|ENSG00000141580|chr17:82617357-82617357|T/-|frameshift_variant', 'ENSG00000141580|ENST00000392325|WDR45B', 'ENST00000583470.1_1_17:30439049-30439436:-|nuORF'] 41310 13750 HVVDVSVAV True PC9_epitope_Rep5 923.5076313199099 923.50652993586 57.911 2 -0.161681914818151 0.038976249447996464 0.5094916499162582 ['ENSG00000150768|ENST00000280346|DLAT', 'ENST00000533297.1_1_11:111896132-111933256:+|nuORF'] 6471 8605 APSGNYVAC True PC9_epitope_Rep4 880.3749028981999 880.37380993586 40.58 2 -0.1616864732176274 0.038976249447996464 0.5095062428101885 ['ENSG00000114450|ENST00000232564|GNB4'] 9415 16608 AVTGTHTLAL True PC9_epitope_Rep2 982.54474510462 982.54364993586 69.126 2 -0.16169726163851358 0.038976249447996464 0.5095407788399386 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 117897 5485 TWKSNDTAASE True NCI_RA007_Epitope_Rep1 1208.5309455152799 1208.52984993586 25.407 2 -0.1617051711059571 0.038976249447996464 0.5095660976960729 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 118224 10828 TYLDKIKKF True PC9_epitope_Rep4 1154.66994561774 1154.6683049037902 49.411 3 -0.16172257105084153 0.038976249447996464 0.5096217932789667 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 26362 13468 FHSRTIYDI True PC9_epitope_Rep5 1150.5771078620598 1150.5754649037901 56.823 3 -0.16174162791680582 0.038976249447996464 0.5096827876601833 ['ENSG00000144021|ENST00000488633|CIAO1'] 16358 14909 EEIKDFLLTA True H1975_Epitope_Rep2 1177.6230549949698 1177.6219499358601 62.5 2 -0.16178733831258107 0.038976249447996464 0.5098290700066366 ['ENSG00000172809|ENST00000311111|RPL38', 'ENST00000529123.2_1_17:72199871-72200367:+|nuORF', 'ENST00000530646.1_1_17:72199871-72200367:+|nuORF'] 46824 11026 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1118.5277749905702 1118.52727496793 47.372 1 -0.161817897433604 0.03899320354797834 0.509926848958674 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 106973 7822 SVEEYQDP True H1975_Epitope_Rep2 965.3978060874099 965.39670993586 35.035 2 -0.16182917110771003 0.03899320354797834 0.5099629176370183 ['ENSG00000114270|ENST00000681320|COL7A1', 'nc|ENSG00000114270|Q02388-2|COL7A1', 'ENST00000466591.1_1_3:48601841-48602743:-|nuORF'] 70141 14373 LVPPDQPEV True PC9_epitope_Rep2 992.51786165044 992.51676993586 60.547 2 -0.16184961459989064 0.03899320354797834 0.5100283194308731 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 6965 20587 AQLDPEALGNI True PC9_epitope_Rep3 1139.58225281215 1139.5811499358601 84.454 2 -0.16194377978468727 0.03903010290277991 0.5103294922062274 ['ENSG00000134690|ENST00000373055|CDCA8'] 52562 9564 KLGSLHSRK True NCI_RA007_Epitope_Rep4 1024.61416207712 1024.61306993586 43.634 2 -0.161960629371341 0.03903010290277991 0.510383369850704 ['ENST00000443959.1_1_1:151254316-151254367:+|nuORF'] 56107 9537 LATVTVRP True PC9_epitope_Rep2 855.5178020807899 855.51670993586 42.03 2 -0.1620203858576206 0.039048551517594884 0.5105744128327561 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 55518 13663 LAGPAELL True H1975_Epitope_Rep1 782.4538048418999 782.4532549679301 57.689 1 -0.16206079275455368 0.0390639996928629 0.510703566137273 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 81845 17389 PLPWVNSSV True PC9_epitope_Rep2 997.52328138405 997.52218993586 72.148 2 -0.1620874651439021 0.0390639996928629 0.5107888069405377 ['ENST00000571156.1_1_17:78181480-78183436:-|nuORF', 'ENST00000326317.10_1_17:78183109-78183520:-|nuORF'] 142510 21267 YYIFIPSKF True PC9_epitope_Rep5 1176.6219327961599 1176.62029490379 86.854 3 -0.1620995203420554 0.0390639996928629 0.510827330174434 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 5781 5171 APDEKYVAA True PC9_epitope_Rep4 962.4709114580199 962.46980993586 26.582 2 -0.1621038239034038 0.0390639996928629 0.5108410820092899 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 89393 19913 QYAPLLAVF True NCI_RA007_Epitope_Rep5 1020.5644179200399 1020.56332993586 83.509 2 -0.16213853908969456 0.0390639996928629 0.5109520032185131 ['ENSG00000136261|ENST00000258761|BZW2'] 32699 6769 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.3753949679301 32.715 1 -0.16217263941230736 0.03908169533169533 0.511060943196442 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 69537 14089 LVDDNYFY True H1975_Epitope_Rep3 1047.45492704071 1047.45382993586 59.52 2 -0.16219119937191423 0.03908169533169533 0.5111202295890792 ['ENSG00000174231|ENST00000304992|PRPF8'] 117040 6695 TVIAKVNNV True PC9_epitope_Rep6 956.5654805492 956.56438993586 34.51 2 -0.1622868169812038 0.03909938961188529 0.5114255849340161 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 125145 14628 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 61.476 1 -0.1623043204484686 0.03909938961188529 0.5114814682537674 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 122223 12018 VGAPKIPSV True PC9_epitope_Rep4 866.5225531080599 866.52144993586 54.027 2 -0.16236663735108042 0.0391178333557266 0.511680391940617 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 124063 9403 VGSKSQDVSL True PC9_epitope_Rep4 1018.5294889633 1018.52838993586 43.777 2 -0.16239235758867215 0.0391362763915547 0.5117624781209138 ['nc|ENSG00000102385|Q13474-2|DRP2', 'ENSG00000102385|ENST00000395209|DRP2'] 90292 4430 REERPPTLSA True H1975_Epitope_Rep2 1154.6043852390599 1154.6027249037902 22.151 3 -0.16249705118060043 0.039173912208978715 0.512096510131469 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 39927 11719 HPHDRLMFP True PC9_epitope_Rep1 1148.55493294884 1148.55328490379 49.952 3 -0.16254431061266617 0.03919235346051975 0.5122472430296876 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3'] 127565 17057 VNSNENIIF True H1975_Epitope_Rep1 1048.5189242796 1048.5178299358602 71.034 2 -0.16257735092948808 0.03920928893580271 0.512352605299705 ['NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 90294 4092 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 20.866 3 -0.16258420747800273 0.03920928893580271 0.5123744681787967 ['IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'ENSG00000166452|ENST00000309377|AKIP1'] 19913 8482 ELVDGHFDTKI True H1975_Epitope_Rep1 1272.6350166609998 1272.6339099358602 37.555 2 -0.1626480596660422 0.03920928893580271 0.5125780355480362 ['nc|ENSG00000145293|Q9UHY7-2|ENOPH1', 'ENSG00000145293|ENST00000273920|ENOPH1'] 24820 13042 FAVATPEEL True NCI_RA007_Epitope_Rep3 975.4913125494298 975.49020993586 58.576 2 -0.16274498026102716 0.0392661113883238 0.5128869158784951 ['AMFR|p.M380Vfs*3|1|0.07|ENSG00000159461|chr16:56389322-56389323|AT/-|frameshift_variant', 'ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 54426 13177 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64755490379 57.362 3 -0.1627703484197844 0.03928379519459584 0.512967740279082 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 65859 16280 LSDLNDELLLK True H1975_Epitope_Rep3 1271.69728256439 1271.69618993586 68.088 2 -0.1627761318782497 0.03928379519459584 0.5129861654015747 ['ENSG00000137628|ENST00000393743|DDX60'] 79146 15555 PALRGALL True PC9_epitope_Rep1 809.5123227775299 809.51122993586 64.655 2 -0.16281710104156782 0.03929092164837695 0.5131166723439938 ['ENST00000262738.7_1_22:46932303-46932903:-|nuORF'] 90678 4849 REQERAYIV True H1975_Epitope_Rep2 1162.6094706195 1162.60783490379 23.739 3 -0.16281785162638024 0.03929092164837695 0.5131190630985966 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant', 'ENST00000482693.1_1_11:64540804-64545891:-|nuORF'] 62613 15860 LLLCRFNRFSV True PC9_epitope_Rep1 1366.75436103138 1366.7527049037901 65.814 3 -0.16284030862664198 0.03929092164837695 0.5131905891059924 ['ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-4|GREB1'] 95471 19743 RWLWRQRIRLY True PC9_epitope_Rep2 1644.9477326470399 1644.94662993586 81.331 2 -0.1628583616418645 0.03929092164837695 0.5132480830149385 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 138764 20453 YITDLFQVL True NCI_RA007_Epitope_Rep3 1110.59611197114 1110.5950099358602 89.111 2 -0.16289831279810799 0.03929092164837695 0.5133752996460142 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10'] 12333 18169 DIQQLYGGL True PC9_epitope_Rep6 1005.51311062317 1005.51200993586 82.529 2 -0.1629195323898977 0.03929092164837695 0.5134428598270471 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant', 'ZFHX3|p.S2241Kfs*30|1|0.48|ENSG00000140836|chr16:72795962-72795963|-/C|frameshift_variant'] 73465 13768 MVAPAVASV True PC9_epitope_Rep6 843.4524249429099 843.45187496793 64.761 1 -0.16293676263818094 0.03929092164837695 0.5134977136733355 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 494 4298 AAPAAAAAAA True PC9_epitope_Rep4 754.3973525949399 754.3962499358599 22.946 2 -0.16294229533804439 0.03929092164837695 0.5135153265386817 ['ENST00000525718.5_1_11:832961-833994:+|nuORF', 'ENST00000530155.5_1_11:832961-836303:+|nuORF', 'ENST00000280481.8_1_13:39261339-39261684:+|nuORF', 'nc|ENSG00000169181|Q6UXU4-3|GSG1L', 'ENSG00000169181|ENST00000447459|GSG1L', 'ENSG00000131668|ENST00000253968|BARX1'] 84696 17053 QDLLVASL True PC9_epitope_Rep6 857.48583324617 857.48472993586 78.159 2 -0.16295057789367942 0.03929092164837695 0.5135416924942144 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF', 'ENST00000574767.5_1_17:78681670-78831736:+|nuORF', 'nc|ENSG00000141564|Q8N122-2|RPTOR'] 16230 11664 EEEREKTL True PC9_epitope_Rep3 1032.5087535187197 1032.5076499358602 49.884 2 -0.16295374087371725 0.03929092164837695 0.5135517609811401 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 82296 4777 PPHPPPPPP True NCI_RA007_Epitope_Rep2 931.49158733295 931.49048993586 23.212 2 -0.16299144714331806 0.03929092164837695 0.5136717773868901 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 20636 20743 EPVTYFITF True PC9_epitope_Rep6 1115.5539128059897 1115.55280993586 92.547 2 -0.16299524414381292 0.03929092164837695 0.5136838618214149 ['ENSG00000005059|ENST00000394650|MCUB', 'ENST00000494604.1_1_4:110605598-110605826:+|nuORF'] 52639 7504 KLREVLHELYK True H1975_Epitope_Rep3 1426.82963414662 1426.82797490379 33.845 3 -0.1630110699223652 0.03929092164837695 0.5137342270941334 ['ENSG00000155097|ENST00000518738|ATP6V1C1'] 33030 5716 GIIEAFRRYAR True NCI_RA007_Epitope_Rep5 1350.75205253226 1350.7504049037902 28.674 3 -0.16302239496626453 0.03929092164837695 0.5137702666064374 ['CRNN|p.T295Pfs*34|1|0.07|ENSG00000143536|chr1:152410205-152410206|TC/-|frameshift_variant', 'ENSG00000143536|ENST00000271835|CRNN'] 80373 8028 PGHLQEGF True PC9_epitope_Rep2 883.41881631551 883.41770993586 36.241 2 -0.1630671755616294 0.03929092164837695 0.5139127528158354 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 82914 13326 PSAPVPLAS True PC9_epitope_Rep3 837.45961849833 837.45852993586 56.291 2 -0.1630685888115244 0.03929092164837695 0.5139172491207377 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 23902 9920 EYKNTNEMF True PC9_epitope_Rep4 1174.49647458286 1174.49536993586 45.809 2 -0.16312296333184756 0.03930784430333608 0.5140902213529445 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 141501 15104 YTKYSYYI True PC9_epitope_Rep3 1099.52261267771 1099.5215099358602 63.236 2 -0.16312354243470706 0.03930784430333608 0.514092063318953 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.A1711Lfs*3|1|0.11|ENSG00000042781|chr1:216084735-216084735|G/-|frameshift_variant', 'USH2A|p.T1128S|1|0.11|ENSG00000042781|chr1:216200056-216200056|T/A|missense_variant'] 142299 13943 YYDKHFTEF True PC9_epitope_Rep3 1248.54513902744 1248.5440499358601 58.708 2 -0.1631620317651736 0.03930784430333608 0.5142144761875187 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 68099 13963 LTDPAIVKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 58.545 2 -0.1632025523363283 0.03934243842553518 0.5143433257504387 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 24630 18169 FAITAIKGV True PC9_epitope_Rep3 918.5538532363399 918.55274993586 75.089 2 -0.16324730873900756 0.03934243842553518 0.5144856165447877 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18', 'ENST00000495909.2_1_5:90650295-90650631:+|nuORF'] 48782 16696 KDLNFQGKTI True PC9_epitope_Rep5 1162.63462273818 1162.63352993586 69.225 2 -0.1632481893553783 0.03934243842553518 0.5144884159285313 ['nc|ENSG00000167103|Q5T9C9-2|PIP5KL1', 'ENST00000464759.5_1_9:130684128-130689655:-|nuORF', 'ENST00000498783.5_1_9:130687427-130690958:-|nuORF', 'ENSG00000167103|ENST00000388747|PIP5KL1'] 109664 5792 TEAREAALP True H1975_Epitope_Rep3 956.4927095317598 956.49160993586 27.303 2 -0.16325465574638837 0.03934243842553518 0.5145089715324583 ['ENST00000314845.7_1_11:46418495-46418936:-|nuORF'] 41637 10782 IAELETEKRD True H1975_Epitope_Rep3 1202.61428121642 1202.6131899358602 46.553 2 -0.16327803129779392 0.03934243842553518 0.5145832734569908 ['ENST00000497858.1_1_1:38027642-38030659:+|nuORF', 'ENST00000467277.1_1_1:38027150-38030659:+|nuORF', 'nc|ENSG00000163879|O14645-2|DNALI1', 'ENSG00000163879|ENST00000652629|DNALI1'] 29046 14259 FTETDDPEEYY True H1975_Epitope_Rep2 1407.53542175903 1407.5343299358601 59.997 2 -0.16329359781694394 0.03935935551932483 0.5146327489841482 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 31806 10072 GEIGLGTPP True NCI_RA007_Epitope_Rep3 839.43888305375 839.43833496793 46.711 1 -0.1633336331503376 0.03935935551932483 0.5147599780170107 ['ENSG00000131400|ENST00000253719|NAPSA'] 108585 19014 SYPAFWTSF True NCI_RA007_Epitope_Rep4 1104.4916469026 1104.4905499358601 82.248 2 -0.1633343024488362 0.03935935551932483 0.5147621047917464 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 73377 6939 MTERQALSY True H1975_Epitope_Rep2 1097.5175443806097 1097.51644993586 31.612 2 -0.16337884493581956 0.0393916728995263 0.5149036288785721 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000480468.1_1_11:116728475-116732017:-|nuORF', 'nc|ENSG00000160584|Q9Y2K2-6|SIK3'] 9658 11716 AYEHKFYEI True PC9_epitope_Rep2 1198.5658744720197 1198.56421490379 50.397 3 -0.16340701676144556 0.0393916728995263 0.514993123564125 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 123175 13674 VGLADAGL True H1975_Epitope_Rep1 714.39120458534 714.39065496793 57.732 1 -0.16345000265952378 0.0393916728995263 0.5151296560745687 ['nc|ENSG00000157077|O95405-3|ZFYVE9', 'ENST00000361625.5_1_1:52698878-52729552:+|nuORF', 'nc|ENSG00000157077|O95405-2|ZFYVE9', 'ENSG00000157077|ENST00000287727|ZFYVE9', 'ZFYVE9|p.C439F|1|0.16|ENSG00000157077|chr1:52238733-52238733|G/T|missense_variant'] 127852 20904 VPFPTPLEA True PC9_epitope_Rep3 969.5171333744498 969.51602993586 85.682 2 -0.16346542359954763 0.0393916728995263 0.515178629625847 ['ENSG00000196976|ENST00000357360|LAGE3'] 55661 22124 LALAIYTGV True PC9_epitope_Rep1 919.53786881903 919.53676993586 89.912 2 -0.16347469502736928 0.0393916728995263 0.5152080719621276 ['ENSG00000105370|ENST00000596399|LIM2', 'nc|ENSG00000105370|P55344-2|LIM2'] 38909 14504 HHFEWIQKL True PC9_epitope_Rep6 1236.64037682496 1236.63874490379 67.672 3 -0.16352251177156416 0.0393916728995263 0.5153598984532473 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 4305 22020 AIIGGMFTV True PC9_epitope_Rep2 907.48372507119 907.48262993586 90.171 2 -0.16355997299270816 0.0393916728995263 0.5154788205579961 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 64766 10900 LQAELEKAV True PC9_epitope_Rep4 999.5600608155898 999.55896993586 49.692 2 -0.16360451963236933 0.0393916728995263 0.5156202083431422 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'ENST00000494080.5_1_11:64109984-64120281:+|nuORF', 'nc|ENSG00000168071|A6NC98-2|CCDC88B', 'ENST00000463837.5_1_11:64107738-64120281:+|nuORF', 'ENST00000492980.1_1_11:64111011-64117377:+|nuORF', 'nc|ENSG00000168071|A6NC98-3|CCDC88B', 'ENST00000494566.5_1_11:64110218-64117194:+|nuORF'] 17387 5030 EHDPPHHCSR True H1975_Epitope_Rep2 1213.50468828113 1213.5030449037902 24.428 3 -0.16367259434015916 0.03940707217918233 0.515836215193337 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 57506 11941 LEDLPTVEA True H1975_Epitope_Rep1 985.49679185269 985.49568993586 50.935 2 -0.1636910866346677 0.03940707217918233 0.5158948808348207 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 22354 9797 ETDSIHIEY True H1975_Epitope_Rep3 1105.49276910141 1105.49166993586 42.708 2 -0.16372455119097828 0.03940707217918233 0.5160010319986246 ['ENST00000302754.5_1_19:12903662-12904103:+|nuORF'] 12239 14696 DIKDRFLLP True H1975_Epitope_Rep2 1115.63389446219 1115.63278993586 61.688 2 -0.16373796656909273 0.03940707217918233 0.5160435814965633 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2'] 33419 8496 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 37.634 1 -0.16376354606142193 0.03940707217918233 0.5161247043724339 ['ENSG00000170684|ENST00000303809|ZNF296'] 105134 18506 SRFGKYFEI True PC9_epitope_Rep5 1145.58694426977 1145.58529490379 76.207 3 -0.1638229856368592 0.039483019808625286 0.5163131732131196 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 34682 7849 GQDGQLKGF True PC9_epitope_Rep4 948.4664947839199 948.46538993586 37.605 2 -0.16386313442532222 0.0394976512319049 0.5164404454168732 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 73441 15310 MVADKFTEL True PC9_epitope_Rep4 1052.52123277872 1052.52012993586 66.823 2 -0.16387448223534692 0.0394976512319049 0.5164764137215224 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 29047 14115 FTETDDPEEYY True H1975_Epitope_Rep3 1407.53542175903 1407.5343299358601 59.622 2 -0.16391035822277686 0.0394976512319049 0.5165901143652383 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 59161 11683 LFAGAEAEA True H1975_Epitope_Rep2 877.41814760917 877.4175949679301 50.011 1 -0.1639381591407067 0.0394976512319049 0.5166782095672521 ['ENST00000541086.5_1_14:103389974-103397014:+|nuORF', 'ENSG00000166126|ENST00000299155|AMN'] 106018 7564 SSVVTVPSS True NCI_RA007_Epitope_Rep4 861.44436235701 861.44381496793 35.741 1 -0.1639768211382552 0.0394976512319049 0.5168007017821031 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 75858 15962 NLQEAEEWYK True PC9_epitope_Rep3 1308.59863115228 1308.5975299358602 66.544 2 -0.16400488735371338 0.0394976512319049 0.5168896093573577 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 2890 7828 AEVRVIAPP True H1975_Epitope_Rep2 950.5549158654998 950.55380993586 35.059 2 -0.16410451436461757 0.039532966506259704 0.5172051091821297 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 23662 17860 EYAKTFGYTF True PC9_epitope_Rep4 1225.5655401188499 1225.56444993586 76.739 2 -0.1641151644375355 0.039532966506259704 0.517238827011884 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 33429 8136 GLAEVAAAV True NCI_RA007_Epitope_Rep5 799.4439684341899 799.44341496793 37.978 1 -0.16414561153926094 0.039532966506259704 0.5173352121460538 ['ENSG00000170684|ENST00000303809|ZNF296'] 39906 17169 HPFGFVAV True PC9_epitope_Rep4 872.4544735482399 872.45336993586 74.047 2 -0.164146753477805 0.039532966506259704 0.5173388268589559 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 105155 13126 SRFPEALRL True PC9_epitope_Rep6 1087.61382772395 1087.6127299358602 62.122 2 -0.16415500758007656 0.03955062211230613 0.5173649539522314 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 73737 11371 NAAPGVDL True PC9_epitope_Rep6 755.38136817763 755.38026993586 54.784 2 -0.16417084092369794 0.03955062211230613 0.5174150690619979 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 24343 15787 EYVSQHLVF True PC9_epitope_Rep6 1120.5553097883198 1120.5542099358602 72.975 2 -0.16422600966558148 0.03956903492964227 0.517589657212395 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 48550 10111 KALSDHHIYL True PC9_epitope_Rep5 1195.63495709135 1195.63330490379 43.877 3 -0.1642544850945377 0.039606617717539254 0.5176797529472604 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 64228 15543 LPGVAGAVG True PC9_epitope_Rep5 739.42283906679 739.42229496793 64.796 1 -0.16433169433862638 0.03964419906448892 0.5179239791031911 ['ENSG00000164692|ENST00000297268|COL1A2', 'COL1A2|p.R882H|1|0.23|ENSG00000164692|chr7:94424415-94424415|G/A|missense_variant'] 10721 18659 CRSLSVPVDL True PC9_epitope_Rep4 1087.5695799534699 1087.56848993586 79.85 2 -0.1644314161546782 0.039737003527066404 0.5182392809825331 ['ENSG00000120709|ENST00000239906|FAM53C'] 87790 18029 QRDMYRILL True PC9_epitope_Rep1 1206.65431263694 1206.65266490379 74.14 3 -0.16443218622331454 0.039737003527066404 0.5182417152014428 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant', 'nc|ENSG00000047410|P12270-2|TPR'] 92756 5616 RPAAGFVA True PC9_epitope_Rep6 787.4340724568299 787.43296993586 29.678 2 -0.1644551821793293 0.039737003527066404 0.518314402162555 ['ENSG00000141526|ENST00000582743|SLC16A3'] 59934 14209 LGGQLNVSV True PC9_epitope_Rep6 885.4919812557699 885.49088993586 66.542 2 -0.16447427835319897 0.039737003527066404 0.5183747562694818 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1'] 132740 17456 VVIGAVVAA True PC9_epitope_Rep1 797.50108938749 797.49998993586 71.942 2 -0.1645293794882308 0.03975312428122364 0.5185488737345737 ['ENSG00000234745|ENST00000412585|HLA-B'] 44957 18032 IPAALPVAA True PC9_epitope_Rep3 821.50108938749 821.49998993586 74.563 2 -0.16453016128126224 0.03975312428122364 0.518551343833043 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 36682 19613 GVIQDFINA True PC9_epitope_Rep6 975.5025459394699 975.50144993586 88.102 2 -0.16456831945402103 0.03975312428122364 0.5186718942330766 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 59551 18956 LFSYSQIF True NCI_RA007_Epitope_Rep4 1003.5014833103099 1003.50038993586 81.991 2 -0.16457025164326036 0.03975312428122364 0.5186779978618542 ['ENSG00000127529|ENST00000248072|OR7C2'] 131561 11259 VTLELREN True PC9_epitope_Rep5 972.52400966004 972.52290993586 48.298 2 -0.16461153838023507 0.0397715293350967 0.5188084054924104 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 134402 20119 VYPGLAVFF True NCI_RA007_Epitope_Rep4 1011.5429541994698 1011.54184993586 87.046 2 -0.16464654942681986 0.03978917105893627 0.5189189701245912 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 27327 13497 FLSEKLERI True PC9_epitope_Rep5 1133.6444591458899 1133.64280490379 56.935 3 -0.1646570934158379 0.03978917105893627 0.5189522642392785 ['ENSG00000183291|ENST00000331835|SELENOF'] 29130 21922 FTLVSLSLTL True PC9_epitope_Rep3 1092.64306216356 1092.64196993586 89.622 2 -0.1647365948481175 0.039806811430323705 0.5192032454700528 ['ENST00000544451.2_1_8:52730731-52730815:-|nuORF'] 20756 16828 EQFHQFLEA True PC9_epitope_Rep3 1147.52982331647 1147.5287299358602 69.88 2 -0.1647516582144003 0.039806811430323705 0.5192507885283347 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF', 'DUS3L|p.E258Kfs*28|1|0.17|ENSG00000141994|chr19:5789335-5789335|C/-|frameshift_variant'] 107950 7511 SVYDGHGGEEV True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 34.259 2 -0.16478911845512148 0.03981987161061608 0.5193690053632904 ['ENSG00000115241|ENST00000344034|PPM1G'] 71370 18373 LYRLQFNEF True PC9_epitope_Rep6 1228.6240580544797 1228.62296993586 83.317 2 -0.16480672096512322 0.03981987161061608 0.5194245477157297 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 5165 17217 ALLSSLARC True PC9_epitope_Rep1 932.51133680136 932.51022993586 71.043 2 -0.16483880652106583 0.03981987161061608 0.5195257769266197 ['nc|ENSG00000107789|Q9UNW1-3|MINPP1', 'nc|ENSG00000107789|Q9UNW1-2|MINPP1', 'ENSG00000107789|ENST00000371996|MINPP1'] 30171 12009 FYQEHPDL True PC9_epitope_Rep3 1047.4661604307498 1047.4650699358601 51.218 2 -0.16484817474937632 0.03981987161061608 0.5195553304437299 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 11455 10210 DFC[Carbamidomethyl]IQVGR True H1975_Epitope_Rep3 993.4702005447999 993.46910993586 44.318 2 -0.16486474390508873 0.03981987161061608 0.5196075970345657 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF'] 79489 6704 PAYQQISRER True PC9_epitope_Rep1 1246.64183337694 1246.64017490379 30.591 3 -0.16488637490976785 0.03981987161061608 0.5196758245176062 ['ENST00000421312.5_1_7:56099644-56119024:-|nuORF', 'ENST00000419984.6_1_7:56101084-56118851:-|nuORF', 'ENST00000395471.7_1_7:56099644-56118857:-|nuORF'] 105627 16687 SSDSTFLVL True NCI_RA007_Epitope_Rep5 967.4862271689899 967.48512993586 70.953 2 -0.16489238071921647 0.03981987161061608 0.5196947664564237 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 108033 19541 SYADQMFLL True NCI_RA007_Epitope_Rep1 1086.50558271458 1086.5044899358602 80.176 2 -0.164920394226833 0.03981987161061608 0.5197831118051706 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 103294 19879 SPLPGLASV True PC9_epitope_Rep2 839.47526856247 839.47416993586 81.857 2 -0.16506806411121203 0.03983827080059786 0.5202486102604529 ['nc|ENSG00000075426|P15408-3|FOSL2', 'nc|ENSG00000075426|P15408-2|FOSL2', 'ENSG00000075426|ENST00000264716|FOSL2'] 86096 7856 QHSVQVDQL True PC9_epitope_Rep4 1052.5250722892 1052.5239699358601 37.634 2 -0.1650986452140071 0.03987583114568762 0.5203449679184003 ['nc|ENSG00000269335|Q9Y6K9-2|IKBKG', 'ENSG00000269335|ENST00000594239|IKBKG'] 110983 6174 THAPATLEA True PC9_epitope_Rep3 909.45559574705 909.45448993586 28.79 2 -0.1651632277617124 0.039891171060698956 0.5205484118707121 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 3578 9050 AGLYKENLLL True NCI_RA007_Epitope_Rep4 1132.6492101731599 1132.64810993586 41.644 2 -0.16516800025804615 0.039891171060698956 0.5205634432797537 ['ENSG00000206190|ENST00000555815|ATP10A'] 16080 9118 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.60967496793 39.469 1 -0.16517192678876697 0.039891171060698956 0.5205758099735595 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 91520 10817 RIAGIRGIQGV True PC9_epitope_Rep2 1138.69347502698 1138.69183490379 46.926 3 -0.1651740582064512 0.039891171060698956 0.5205825228177846 ['EFR3A-ZFAT|2|fusion', 'EFR3A-ZFAT|1|fusion', 'EFR3A|p.R244Sfs*9|1|0.49|ENSG00000132294|chr8:131955854-131955855|-/G|frameshift_variant', 'EFR3A|p.G390Efs*13|1|0.19|ENSG00000132294|chr8:131976035-131976035|G/-|frameshift_variant', 'nc|ENSG00000132294|Q14156-3|EFR3A', 'nc|ENSG00000132294|Q14156-2|EFR3A', 'ENSG00000132294|ENST00000254624|EFR3A'] 55675 12114 LALEVCPLPP True H1975_Epitope_Rep1 1050.5783537320199 1050.5772499358602 51.61 2 -0.16522379786882277 0.039891171060698956 0.5207391561733064 ['ENSG00000143502|ENST00000366878|SUSD4', 'SUSD4|p.E293Sfs*18|1|0.1|ENSG00000143502|chr1:223229216-223229237|TTGATAAGAAGGAAACCACTCT/-|frameshift_variant'] 39608 16512 HLLDHLSIV True PC9_epitope_Rep6 1045.5920296502102 1045.59092993586 75.947 2 -0.1652810434295733 0.03990803716831114 0.5209193775702876 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L'] 142849 19996 YYTDIMHTL True PC9_epitope_Rep5 1155.5270464351497 1155.52647496793 81.968 1 -0.1653097415127443 0.03990803716831114 0.5210097057718754 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 110136 13369 TENCDFLFSP True H1975_Epitope_Rep2 1171.4855755459898 1171.48446993586 56.556 2 -0.16531172237426053 0.03990803716831114 0.5210159401188794 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 107769 17220 SVSTQLSLV True PC9_epitope_Rep6 932.51786165044 932.51676993586 78.827 2 -0.1653347625133868 0.039926431144148976 0.5210884495533289 ['ENSG00000214194|ENST00000397764|SMIM30'] 86134 7450 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep1 1118.4736312427299 1118.4725299358602 33.659 2 -0.1654219317258323 0.03994329393283396 0.5213627026356571 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 58380 6080 LENLSTASS True H1975_Epitope_Rep3 920.4450906330001 920.44454496793 28.399 1 -0.165457962507855 0.03994329393283396 0.5214760278431586 ['RASAL2|p.Q869Rfs*10|1|0.08|ENSG00000075391|chr1:178458318-178458318|C/-|frameshift_variant', 'ENSG00000075391|ENST00000367649|RASAL2', 'nc|ENSG00000075391|Q9UJF2|RASAL2'] 90913 11939 REYPNLVTI True NCI_RA007_Epitope_Rep2 1103.59750895347 1103.59640993586 51.043 2 -0.1654616511329226 0.03994329393283396 0.5214876282593403 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 6256 14783 APRAALVFA True PC9_epitope_Rep1 914.5337864980999 914.53268993586 61.682 2 -0.16549005815386802 0.03996168582375479 0.5215769586724958 ['ENSG00000170006|ENST00000304385|TMEM154'] 53333 8468 KQMEQVAQFLK True NCI_RA007_Epitope_Rep3 1348.7173068163195 1348.71565490379 40.388 3 -0.16552040390111936 0.04001762384582966 0.5216723714680609 ['ENSG00000149591|ENST00000392951|TAGLN', 'ENST00000533863.1_2_11:117074025-117074655:+|nuORF'] 128628 10157 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43778993586 44.022 2 -0.1655386285476925 0.04001762384582966 0.521729666137707 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 59422 7395 LFMFRRLRQFR True NCI_RA007_Epitope_Rep5 1568.8874408895997 1568.88580490379 35.122 3 -0.16564732198457094 0.04005286748649581 0.5220712661451276 ['PNPLA7|p.A228Lfs*27|1|0.31|ENSG00000130653|chr9:137522845-137522849|GTGCA/-|frameshift_variant', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 34541 13391 GPSGCLVPA True PC9_epitope_Rep5 799.3898246863499 799.3887299358599 56.525 2 -0.16566616703724005 0.04005286748649581 0.5221304727804514 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 115843 10326 TSDVGGYYY True H1975_Epitope_Rep1 1023.4185415319901 1023.41744993586 44.667 2 -0.16566869722000957 0.04005286748649581 0.5221384215729532 ['ENSG00000131711|ENST00000296755|MAP1B'] 63328 5476 LLTEEHLR True H1975_Epitope_Rep3 1009.5556441414899 1009.55454993586 26.116 2 -0.16569301912131412 0.04005286748649581 0.5222148257185787 ['ENSG00000187033|ENST00000335556|SAMD7'] 95283 21082 RVPSLLVLL True PC9_epitope_Rep4 1008.66955169492 1008.6684499358599 89.253 2 -0.16581615252994109 0.04007048728164266 0.5226014872687577 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF', 'nc|ENSG00000145730|P19021-4|PAM', 'nc|ENSG00000145730|P19021-3|PAM', 'nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM'] 5256 13053 ALPRGFLSP True PC9_epitope_Rep4 956.5443511817999 956.54324993586 58.103 2 -0.1658453840189218 0.04007048728164266 0.5226932435550263 ['nc|ENSG00000167566|Q9HCH0-4|NCKAP5L', 'ENST00000491441.1_1_12:50196735-50197827:-|nuORF'] 55149 17220 LAAGLLEEL True NCI_RA007_Epitope_Rep5 927.52769805815 927.5271449679301 73.008 1 -0.16590484071142433 0.04008887356586029 0.5228798326672431 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1', 'ENST00000469476.2_1_1:40313418-40313755:-|nuORF'] 74517 22866 NFIPTIVNF True PC9_epitope_Rep2 1063.57023157647 1063.56912993586 93.443 2 -0.16600302724823984 0.040144028192752625 0.5231878395977615 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 49360 16356 KESNDLLLIR True PC9_epitope_Rep5 1199.68738658703 1199.68573490379 67.911 3 -0.16600730526762 0.040144028192752625 0.5232012559976424 ['ENSG00000023445|ENST00000263464|BIRC3'] 74930 13092 NHKGEVLI True PC9_epitope_Rep1 908.5079656730799 908.50686993586 55.226 2 -0.16610206143791065 0.040144028192752625 0.5234983466772888 ['nc|ENSG00000161203|Q96CW1-2|AP2M1', 'ENSG00000161203|ENST00000292807|AP2M1', 'ENST00000484469.5_1_3:183894781-183895400:+|nuORF', 'AP2M1|p.M89Dfs*22|1|0.1|ENSG00000161203|chr3:184179045-184179046|-/G|frameshift_variant', 'ENST00000466598.5_1_3:183894781-183896942:+|nuORF', 'ENST00000487958.5_1_3:183894781-183898060:+|nuORF', 'ENST00000472560.5_1_3:183894781-183898834:+|nuORF'] 87285 13570 QPQLPYSQA True PC9_epitope_Rep2 1030.5083595959 1030.5072699358602 57.49 2 -0.16619736337820273 0.04017925540064348 0.5237970006635049 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 113126 21359 TLPDLVPQL True PC9_epitope_Rep4 994.5698972232999 994.5693449679301 90.325 1 -0.1662341852542653 0.04017925540064348 0.523912351993826 ['ENSG00000163811|ENST00000407426|WDR43'] 15074 18553 DYSPYFKTI True PC9_epitope_Rep4 1132.5440763982801 1132.5429699358601 79.439 2 -0.16624085767280747 0.04017925540064348 0.5239332521989708 ['ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__Q6IFX2'] 55147 16521 LAAGLLEEL True NCI_RA007_Epitope_Rep3 927.52769805815 927.52660993586 72.782 2 -0.16627021450026552 0.04017925540064348 0.524025198742312 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1', 'ENST00000469476.2_1_1:40313418-40313755:-|nuORF'] 86060 14234 QHRRWRLHCLK True PC9_epitope_Rep2 1531.8418876795097 1531.84024490379 60.017 3 -0.1663132225839874 0.04019532746074301 0.5241598759123688 ['ENSG00000120254|ENST00000367321|MTHFD1L'] 65092 6180 LQLSPHQIQA True NCI_RA007_Epitope_Rep1 1133.6193070272102 1133.61820993586 28.074 2 -0.1663224568259093 0.04019532746074301 0.5241887884085691 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 118393 18520 TYPAELNNI True PC9_epitope_Rep5 1033.50802524273 1033.5069299358602 76.262 2 -0.16633284214712954 0.04019532746074301 0.5242213032689133 ['ENSG00000106546|ENST00000242057|AHR'] 35054 8884 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42883496793 39.525 1 -0.16633536522702733 0.04019532746074301 0.5242292023802048 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 110952 6978 THADSLNNL True PC9_epitope_Rep4 983.46722305991 983.46612993586 34.084 2 -0.16638950663275043 0.04020985715926933 0.5243986798775342 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'OGT|p.L354Sfs*34|1|0.06|ENSG00000147162|chrX:71556089-71556090|-/CCACTGA|frameshift_variant'] 132178 11157 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 50.992 2 -0.16639884979850467 0.04020985715926933 0.524427921670597 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 64712 20395 LPWAPAGVAA True PC9_epitope_Rep3 951.5178020807898 951.51670993586 83.7 2 -0.16642081288143734 0.04020985715926933 0.5244966550065137 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 42752 14143 IELPSMAVA True NCI_RA007_Epitope_Rep3 929.48920437445 929.48810993586 62.917 2 -0.16642335753005585 0.04020985715926933 0.5245046179545938 ['nc|ENSG00000130592|P33241-3|LSP1', 'nc|ENSG00000130592|P33241-2|LSP1', 'ENST00000485341.5_1_11:1902588-1908790:+|nuORF', 'ENSG00000130592|ENST00000311604|LSP1'] 42518 12418 IEEMRRMP True NCI_RA007_Epitope_Rep5 1060.5157705587999 1060.5146699358602 54.422 2 -0.16642582481577076 0.04020985715926933 0.5245123387095312 ['nc|ENSG00000227345|Q86W56-4|PARG', 'nc|ENSG00000227345|Q86W56-3|PARG', 'nc|ENSG00000227345|Q86W56-2|PARG', 'ENSG00000227345|ENST00000616448|PARG'] 133724 14786 VYDPLSKRW True PC9_epitope_Rep1 1162.61349337078 1162.6118549037901 61.693 3 -0.16649045897096648 0.04020985715926933 0.5247145593520215 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 141219 16300 YTAGPYECEIR True PC9_epitope_Rep2 1300.57578753272 1300.57468993586 67.942 2 -0.1666226423386199 0.040247381622532406 0.5251279056378872 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221878|ENST00000406070|PSG7', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF', 'nc|ENSG00000124467|Q9UQ74-2|PSG8', 'nc|ENSG00000124467|Q9UQ74-3|PSG8', 'ENSG00000124467|ENST00000306511|PSG8'] 111535 18211 TIAEIKNLF True PC9_epitope_Rep6 1047.59644632431 1047.5953499358602 82.69 2 -0.16666657399441315 0.04028490464884736 0.5252652186724776 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 58878 6525 LETAEEVK True NCI_RA007_Epitope_Rep1 917.4705771048499 917.46948993586 29.396 2 -0.16669485019675598 0.04030250813708597 0.5253535819491277 ['ENSG00000100345|ENST00000216181|MYH9'] 92749 7362 RPAAGFVA True PC9_epitope_Rep3 787.4340724568299 787.43296993586 33.327 2 -0.1667026419449837 0.04030250813708597 0.5253779288624466 ['ENSG00000141526|ENST00000582743|SLC16A3'] 96268 17315 RYQQWMERF True PC9_epitope_Rep3 1342.6240751378198 1342.62296993586 71.777 2 -0.16674287873844848 0.04034002795274837 0.5255036408630392 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 114236 17515 TPMPPISSV True PC9_epitope_Rep2 927.47355431031 927.47244993586 72.631 2 -0.16681124499147576 0.040358400980241994 0.5257171759194235 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 27197 23173 FLLPVINEM True PC9_epitope_Rep2 1074.57835373202 1074.5772499358602 94.62 2 -0.16692373438344318 0.04041428954320941 0.5260683549753352 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 140593 10151 YRREITSL True PC9_epitope_Rep2 1036.5665431783598 1036.5654499358602 44.383 2 -0.16692530686081056 0.04041428954320941 0.5260732625672945 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant', 'ENST00000469463.1_1_1:186321098-186322975:-|nuORF'] 57331 8305 LEAEGGAKTLS True NCI_RA007_Epitope_Rep2 1074.5557037111398 1074.55460993586 36.944 2 -0.1670358781718569 0.04047017382647982 0.5264182437287074 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 84434 7048 QAESPLGIRP True H1975_Epitope_Rep1 1066.5771078620598 1066.5760099358602 32.144 2 -0.16704927245527676 0.04047017382647982 0.5264600197633375 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000514104.5_1_5:145522433-145523105:-|nuORF', 'ENST00000512412.1_1_5:145519224-145523084:-|nuORF'] 107155 13878 SVIEQGGIQTV True PC9_epitope_Rep6 1129.59790287629 1129.5968099358602 65.209 2 -0.1670875125292441 0.04048854260390145 0.5265792718142239 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 34006 9594 GLTPLATLKND True NCI_RA007_Epitope_Rep2 1141.63428838501 1141.6331899358602 41.933 2 -0.1671971194751449 0.040506135262926166 0.5269209453528475 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF', 'nc|ENSG00000258628|A8MT19|RHPN2P1'] 59190 4006 LFDENDRRYQK True NCI_RA007_Epitope_Rep2 1482.7215402496201 1482.7198949037902 20.22 3 -0.1671971528827932 0.040506135262926166 0.5269210494622576 ['ENST00000558316.5_2_14:103800804-103802377:+|nuORF'] 89145 10785 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.5758349679301 49.243 1 -0.16736026597742681 0.04052217521964665 0.5274291387403551 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 108170 14181 SYGDILHVI True NCI_RA007_Epitope_Rep3 1015.53384606775 1015.53274993586 63.073 2 -0.1674129922870877 0.04052217521964665 0.5275932818561385 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 35736 7066 GTGLAKCTMGP True H1975_Epitope_Rep3 1034.4888871046198 1034.48778993586 32.147 2 -0.16742214367489108 0.04052217521964665 0.5276217663616941 ['ENST00000370481.8_1_1:89472980-89473100:-|nuORF'] 26671 8921 FISNQTLQ True H1975_Epitope_Rep3 949.48689587533 949.48578993586 39.314 2 -0.16742246403267383 0.04052217521964665 0.5276227634778072 ['ENST00000377865.6_1_13:67799697-67799736:-|nuORF'] 127736 11467 VPAPSPLSA True PC9_epitope_Rep6 837.45961849833 837.45852993586 55.174 2 -0.16753405440232377 0.04057882244851083 0.5279699827415958 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4'] 142839 12954 YYTDIMHTL True NCI_RA007_Epitope_Rep3 1155.5270464351497 1155.5259499358601 58.228 2 -0.16759371159934672 0.04063391199494708 0.5281555218275289 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 134585 21846 VYSGGVYLF True PC9_epitope_Rep3 1003.5014833103099 1003.50038993586 89.333 2 -0.167617660974711 0.04063391199494708 0.5282299893078181 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 70142 14484 LVPPDQPEV True PC9_epitope_Rep2 992.51786165044 992.51676993586 60.983 2 -0.1676436134607737 0.04063391199494708 0.5283106740855396 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 132679 4670 VVGPSHEV True PC9_epitope_Rep1 822.42356734278 822.42246993586 22.834 2 -0.16766174586115606 0.04065149572240617 0.5283670398032329 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 21167 12101 ERDAYVQAL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 51.588 2 -0.16766585503206857 0.04065149572240617 0.5283798126364472 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 73289 15587 MTDGFQFEY True H1975_Epitope_Rep2 1136.44846176128 1136.44787496793 65.111 1 -0.16783643566856726 0.04072337575351641 0.5289097841520545 ['ENSG00000108821|ENST00000225964|COL1A1'] 62822 12859 LLLWKNFMYRR True H1975_Epitope_Rep3 1538.85440942582 1538.8533099358601 54.684 2 -0.1678402974793014 0.04072337575351641 0.5289217764756255 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF', 'ENST00000530703.1_1_19:1041282-1041597:+|nuORF'] 44638 9280 ILSFPAIAL True NCI_RA007_Epitope_Rep4 943.5742543277498 943.57314993586 42.55 2 -0.16788468931823405 0.04072337575351641 0.5290596107173915 ['ENSG00000166073|ENST00000561100|GPR176', 'nc|ENSG00000166073|Q14439-3|GPR176', 'nc|ENSG00000166073|Q14439-2|GPR176'] 105124 8050 SREVLSLSP True H1975_Epitope_Rep2 986.53965972418 986.53856993586 35.913 2 -0.16791523530429978 0.04072337575351641 0.5291544345268738 ['ENST00000461307.5_1_22:18347351-18347441:-|nuORF'] 108633 10762 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 46.351 3 -0.1679212080618055 0.04072337575351641 0.5291729738498172 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 54893 6159 KYPNVFKKI True NCI_RA007_Epitope_Rep3 1135.67536535135 1135.67371490379 31.227 3 -0.1679308759183573 0.04072337575351641 0.5292029813775994 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 73473 23212 MVDDVFYIV True PC9_epitope_Rep5 1099.52598380599 1099.52488993586 94.266 2 -0.16798696855042472 0.04076008955737987 0.5293770522147089 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000526700.5_1_16:70530266-70542451:-|nuORF'] 35460 7473 GSHSMRYFYT True NCI_RA007_Epitope_Rep4 1247.5393424543497 1247.53768490379 35.391 3 -0.16807850438895927 0.04076008955737987 0.529660995640065 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 118096 15446 TYGGSWKF True PC9_epitope_Rep2 944.43921740692 944.43812993586 64.69 2 -0.16812825148711627 0.040777665091180464 0.5298152495376351 ['nc|ENSG00000146416|Q9NVV5-6|AIG1', 'nc|ENSG00000146416|Q9NVV5-5|AIG1', 'nc|ENSG00000146416|Q9NVV5-3|AIG1', 'nc|ENSG00000146416|Q9NVV5-4|AIG1', 'ENSG00000146416|ENST00000357847|AIG1', 'nc|ENSG00000146416|Q9NVV5-1|AIG1'] 118842 6682 VAAQFEECREK True H1975_Epitope_Rep1 1308.6132356705996 1308.6121299358601 30.755 2 -0.16813380144481493 0.040777665091180464 0.5298324559577289 ['ENSG00000138246|ENST00000260818|DNAJC13'] 37086 19422 GVPQALFGV True PC9_epitope_Rep6 886.4912529797799 886.49070496793 87.366 1 -0.16819167637581078 0.040814374007386 0.530011852371306 ['ENSG00000010292|ENST00000315579|NCAPD2'] 78468 18489 NYMPGQLTI True PC9_epitope_Rep6 1035.5059170677498 1035.50537496793 83.758 1 -0.16822454391414318 0.040814374007386 0.530113706659655 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 74521 4840 NFKRLKKTL True NCI_RA007_Epitope_Rep2 1146.7237125261 1146.7220549037902 23.449 3 -0.168246136921805 0.04083116485534976 0.5301806116465926 ['ENST00000275732.5_1_7:100279067-100279163:-|nuORF'] 91521 10263 RIAGIRGIQGV True PC9_epitope_Rep4 1138.69347502698 1138.69183490379 47.16 3 -0.1682698965798799 0.04083116485534976 0.530254220468069 ['EFR3A-ZFAT|2|fusion', 'EFR3A-ZFAT|1|fusion', 'EFR3A|p.R244Sfs*9|1|0.49|ENSG00000132294|chr8:131955854-131955855|-/G|frameshift_variant', 'EFR3A|p.G390Efs*13|1|0.19|ENSG00000132294|chr8:131976035-131976035|G/-|frameshift_variant', 'nc|ENSG00000132294|Q14156-3|EFR3A', 'nc|ENSG00000132294|Q14156-2|EFR3A', 'ENSG00000132294|ENST00000254624|EFR3A'] 98605 5736 SFSTVHEKF True NCI_RA007_Epitope_Rep3 1080.5240096600398 1080.52290993586 29.541 2 -0.16827066964225057 0.04083116485534976 0.5302566152947008 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 30696 13492 GALEPHINAQI True PC9_epitope_Rep4 1161.61422164677 1161.6131299358601 59.794 2 -0.16836621382256012 0.040849516885104756 0.5305525155286952 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 33643 6238 GLGLEPTA True H1975_Epitope_Rep3 756.40176926904 756.40122496793 29.006 1 -0.1683840994919745 0.04088387220202793 0.5306078896101161 ['ENSG00000167378|ENST00000422989|IRGQ'] 97490 11810 SEEKVVTY True H1975_Epitope_Rep2 953.47057710485 953.46948993586 50.503 2 -0.16838586130632238 0.04088387220202793 0.5306133438877478 ['ENSG00000068383|ENST00000368594|INPP5A'] 91564 6368 RIIPRHLQL True NCI_RA007_Epitope_Rep3 1144.719295852 1144.7176649037901 32.051 3 -0.16839040752949552 0.04088387220202793 0.530627417969368 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 120148 7148 VEALIHAA True NCI_RA007_Epitope_Rep4 822.4599528515 822.45884993586 34.116 2 -0.1684166256604062 0.04088387220202793 0.5307085762922522 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000554481.1_1_15:91489865-91490237:+|nuORF', 'ENST00000556704.1_1_15:91490006-91491606:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 89660 14881 QYVDFHNQL True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 62.503 2 -0.16842822931111232 0.04088387220202793 0.5307444915732065 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 126469 6737 VLLGETGK True PC9_epitope_Rep5 815.47526856247 815.47416993586 30.885 2 -0.1684476406852595 0.04090143862871136 0.5308045677887446 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 101367 13075 SLIYTWTTTN True H1975_Epitope_Rep3 1198.5870038394198 1198.5859099358602 55.535 2 -0.16846832733813366 0.04090143862871136 0.5308685835508138 ['ENST00000376414.4_1_13:99948343-99959645:-|nuORF'] 36658 19745 GVIGGGVFQAI True PC9_epitope_Rep6 1016.5654805491998 1016.56438993586 88.608 2 -0.16854901684295412 0.040938916840433874 0.5311182086076125 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 37701 10672 GVYNGKTFNQV True PC9_epitope_Rep2 1225.60913626633 1225.60802993586 46.362 2 -0.16858028497833055 0.04095569668681613 0.5312149103283287 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 99960 12623 SINSHATEWSP True H1975_Epitope_Rep3 1227.55201531303 1227.55090993586 53.759 2 -0.16859852615174586 0.04095569668681613 0.5312713160896659 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 100369 4188 SKTPPQRPPPQ True NCI_RA007_Epitope_Rep2 1231.66731984879 1231.66567490379 20.93 3 -0.1686130578059735 0.04095569668681613 0.5313162469764467 ['ENSG00000157152|ENST00000621198|SYN2', 'nc|ENSG00000157152|Q92777-2|SYN2'] 127098 5226 VLTEVDGK True NCI_RA007_Epitope_Rep5 859.4650978015899 859.46400993586 26.799 2 -0.16867087637756914 0.04097090721294543 0.5314949809925669 ['ENSG00000150656|ENST00000358821|CNDP1'] 9293 8706 AVQFCWNHYK True NCI_RA007_Epitope_Rep1 1294.59171238038 1294.5906099358601 37.867 2 -0.1687108357476878 0.04097090721294543 0.5316184723543333 ['ENSG00000131477|ENST00000253796|RAMP2', 'nc|ENSG00000131477|O60895-2|RAMP2'] 103121 5890 SPHPGLVAA True PC9_epitope_Rep4 847.4552018242299 847.45410993586 29.554 2 -0.16871725019063133 0.04097090721294543 0.5316382930548046 ['ENSG00000100393|ENST00000263253|EP300'] 76196 11171 NNLIEGIG True H1975_Epitope_Rep1 828.4341320264799 828.43302993586 47.937 2 -0.1687457806003959 0.04097090721294543 0.5317264434769597 ['ENSG00000158006|ENST00000374282|PAFAH2'] 103113 5635 SPHLGPAPA True PC9_epitope_Rep4 845.4395517600899 845.43844993586 28.472 2 -0.1687665290442813 0.04097090721294543 0.53179054086007 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 87791 17896 QRDMYRILL True PC9_epitope_Rep5 1206.65431263694 1206.65266490379 73.855 3 -0.16887057781983503 0.04100837764431353 0.5321118591199839 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant', 'nc|ENSG00000047410|P12270-2|TPR'] 78056 6209 NVTTEVKSV True PC9_epitope_Rep2 975.5236753068699 975.52256993586 29.279 2 -0.1689260408410659 0.04102671996633705 0.5322830582983591 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 91287 9915 RGNDSILV True PC9_epitope_Rep5 872.4715801643599 872.47048993586 43.11 2 -0.1689479845903546 0.04104349156561986 0.5323507774609708 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant'] 108990 6676 TAGPAVHL True H1975_Epitope_Rep2 764.41808803952 764.41698993586 30.588 2 -0.1689552068126607 0.04104349156561986 0.5323730636012193 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 3931 15443 AHDDSVMYL True PC9_epitope_Rep1 1049.44879611445 1049.4476899358601 64.222 2 -0.16895688679138857 0.04104349156561986 0.5323782475006995 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 37792 14495 GYEPPVQESV True PC9_epitope_Rep1 1103.51350454599 1103.51297496793 60.58 1 -0.16915713683270756 0.04117343328679888 0.5329957949259886 ['ENSG00000145425|ENST00000274065|RPS3A'] 126074 16158 VLEHLNAIV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 74.504 2 -0.16916556297942173 0.04117343328679888 0.5330217643536211 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.I755Sfs*38|1|0.15|ENSG00000121871|chr3:165188569-165188569|G/-|frameshift_variant'] 31807 10314 GEIGLGTPP True NCI_RA007_Epitope_Rep4 839.43888305375 839.43833496793 46.529 1 -0.169179410105742 0.04117343328679888 0.5330644384885965 ['ENSG00000131400|ENST00000253719|NAPSA'] 26720 13603 FIVSVAKP True PC9_epitope_Rep2 859.5167394516299 859.51564993586 57.612 2 -0.16918198607291982 0.04117343328679888 0.5330723767342171 ['nc|ENSG00000100473|O43405-2|COCH', 'ENSG00000100473|ENST00000396618|COCH'] 13272 14405 DLTDYLMK True NCI_RA007_Epitope_Rep1 997.47903361357 997.47792993586 60.074 2 -0.16926999126805023 0.04117343328679888 0.5333435065603429 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 49154 3205 KELEKTYSA True NCI_RA007_Epitope_Rep5 1067.54989005471 1067.5487899358602 17.702 2 -0.16929542139574105 0.04123001606364262 0.5334218266215391 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 76966 12712 NRDYPPPPL True PC9_epitope_Rep5 1067.5399940773498 1067.5388899358602 53.902 2 -0.1694697725432537 0.04133922254727624 0.5339584800564546 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 72956 11729 MQDKSSYLL True PC9_epitope_Rep4 1083.52704643515 1083.5259499358601 52.877 2 -0.16947176020502902 0.04133922254727624 0.5339645949034062 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9', 'DOCK9|p.D312Efs*18|1|0.3|ENSG00000088387|chr13:98914352-98914352|A/-|frameshift_variant'] 83535 5466 PTTSGPSTPP True H1975_Epitope_Rep3 940.45017601344 940.44906993586 26.079 2 -0.16951619362619505 0.04133922254727624 0.5341012712028591 ['ENSG00000065526|ENST00000375759|SPEN'] 125965 4967 VLDKFMRIYR True NCI_RA007_Epitope_Rep4 1339.74346199451 1339.74181490379 25.575 3 -0.1695305471136851 0.04133922254727624 0.5341454145539367 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 1760 13822 AEGSGPLLYL True H1975_Epitope_Rep2 1018.5335117145801 1018.53240993586 58.314 2 -0.16953565688671224 0.04133922254727624 0.5341611284698948 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 41318 3869 HVVFRYQGVRM True NCI_RA007_Epitope_Rep2 1390.7292089127 1390.7281099358602 19.685 2 -0.16953595149674971 0.04133922254727624 0.5341620344598852 ['nc|ENSG00000197948|Q86WN1-3|FCHSD1'] 120532 10451 VEFNGKLLA True NCI_RA007_Epitope_Rep5 989.5545815123298 989.55348993586 46.831 2 -0.16956002583053648 0.04133922254727624 0.5342360629274461 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 20239 16797 ENLRTGLEL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 69.434 2 -0.16956783000495318 0.04135438972162741 0.5342600584594804 ['ENST00000564731.5_1_16:46761123-46772038:-|nuORF', 'ENSG00000140795|ENST00000394809|MYLK3'] 60814 14413 LHSYFAERL True PC9_epitope_Rep1 1134.5821932425 1134.58054490379 60.262 3 -0.16958560726571875 0.04135438972162741 0.5343147141375943 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1'] 13410 15327 DLYSQISSV True PC9_epitope_Rep3 1010.4920408254201 1010.49094993586 64.111 2 -0.16959955454573072 0.04135438972162741 0.5343575906106273 ['ENST00000566590.5_1_16:8807641-8875284:+|nuORF', 'ENSG00000183044|ENST00000268251|ABAT', 'ENST00000565671.1_1_16:8839919-8854000:+|nuORF'] 115258 12619 TREEGTPLTL True PC9_epitope_Rep5 1115.5822528121498 1115.58167496793 53.541 1 -0.16964102436282247 0.04135438972162741 0.5344850553693733 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 39572 5715 HLHHGKVRRNF True PC9_epitope_Rep2 1399.7697682850696 1399.76812490379 27.373 3 -0.16972113640106884 0.04135438972162741 0.5347312046975161 ['ENST00000589825.5_1_17:42960950-42971889:-|nuORF'] 33994 6692 GLTAHVVSA True PC9_epitope_Rep5 853.46576650793 853.46466993586 30.713 2 -0.16977373037195068 0.04139025369453419 0.5348927391031448 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6'] 68897 8447 LTNLLGAR True PC9_epitope_Rep4 856.5130510535199 856.51194993586 39.955 2 -0.1697774410738888 0.04139025369453419 0.5349041340463256 ['ENSG00000124279|ENST00000264669|FASTKD3'] 92620 6844 RNAGDEVTI True PC9_epitope_Rep5 973.48287312405 973.48176993586 31.296 2 -0.1698173113780733 0.04139025369453419 0.5350265531239753 ['ENSG00000172554|ENST00000308624|SNTG2'] 13657 8433 DPPSNPVAA True PC9_epitope_Rep4 866.4133965819 866.41228993586 39.902 2 -0.16984812314670608 0.041408579949529706 0.5351211385923266 ['ENSG00000056277|ENST00000370978|ZNF280C'] 13303 19736 DLTPNQEYL True PC9_epitope_Rep1 1091.51350454599 1091.5124099358602 80.743 2 -0.16990685632073269 0.04143730886850153 0.5353013884257847 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209'] 118925 14023 VADPVEAVL True NCI_RA007_Epitope_Rep4 911.4963979298699 911.4958449679301 61.221 1 -0.16990796619580728 0.04143730886850153 0.5353047939788088 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 121198 8391 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 37.229 1 -0.16992693862198702 0.04143730886850153 0.5353630056779491 ['ENSG00000052749|ENST00000370992|RRP12'] 86140 17281 QIDGTLSTI True PC9_epitope_Rep2 946.49712620586 946.4965749679301 71.729 1 -0.16996336351628671 0.04143730886850153 0.5354747469338111 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 140150 23583 YQRWREERFRQ True PC9_epitope_Rep1 1652.8284053599998 1652.82730993586 95.5 2 -0.17000287470218833 0.04143730886850153 0.5355959284316967 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 39468 17902 HLDATKLLL True PC9_epitope_Rep5 1022.61243074162 1022.61132993586 73.877 2 -0.17000541986352186 0.04143730886850153 0.5356037334998406 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 112707 13842 TLGPRFLL True H1975_Epitope_Rep2 915.55418758951 915.55308993586 58.39 2 -0.1700223998822981 0.04143730886850153 0.535655801879349 ['ENST00000502001.2_1_5:8457745-8460055:+|nuORF'] 56172 16643 LAVVAGVAAE True PC9_epitope_Rep5 898.5123823471799 898.51128993586 69.022 2 -0.17003159654292926 0.04143730886850153 0.5356840007605176 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 46580 8172 ITAPPGTAA True PC9_epitope_Rep3 797.42831837005 797.4272299358599 36.411 2 -0.17003855176053453 0.04143730886850153 0.535705325873606 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 104754 18993 SQVPHLPVL True PC9_epitope_Rep1 988.5705659296399 988.56946993586 77.842 2 -0.17005857359049895 0.04143730886850153 0.5357667090196697 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 80997 22799 PIKAARYRRP True PC9_epitope_Rep1 1226.7360085453 1226.73490993586 92.508 2 -0.17008274229513118 0.04143730886850153 0.5358407958450158 ['ENSG00000139874|ENST00000267377|SSTR1'] 56174 14694 LAVVAGVAAE True PC9_epitope_Rep6 898.5123823471799 898.51128993586 68.455 2 -0.1700857950372747 0.04143730886850153 0.5358501529636372 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 104424 17655 SQLEREEKLL True PC9_epitope_Rep4 1243.67721582615 1243.67610993586 75.936 2 -0.17023650035615234 0.04147236449812705 0.5363118735142649 ['ENSG00000062370|ENST00000354340|ZNF112', 'nc|ENSG00000062370|Q9UJU3|ZNF112'] 132543 14729 VVDSGAGFTV True PC9_epitope_Rep6 950.4709114580199 950.46980993586 68.605 2 -0.1702436702738787 0.04147236449812705 0.536333829739554 ['ENSG00000110375|ENST00000264031|UPK2', 'ENST00000534788.1_1_11:118795899-118828340:+|nuORF'] 41871 15227 IC[Carbamidomethyl]C[Carbamidomethyl]DILDVLDK True H1975_Epitope_Rep3 1362.6523241601196 1362.65122993586 63.975 2 -0.1702785340261553 0.04147236449812705 0.5364405783905136 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 47988 18959 IYKIDFVRF True PC9_epitope_Rep4 1199.6702799709099 1199.66863490379 81.013 3 -0.17028508993147876 0.04147236449812705 0.5364606492737553 ['nc|ENSG00000109103|Q13432-2|UNC119', 'ENSG00000109103|ENST00000335765|UNC119'] 109559 8442 TDTDTNSQEDP True H1975_Epitope_Rep2 1221.46331944793 1221.46222993586 37.422 2 -0.17044250415386136 0.041526524996177955 0.5369423328326695 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000456826.2_1_1:149262279-149263299:+|nuORF', 'nc|ENSG00000291158|P0C866|LINC00869'] 107481 6048 SVMRPEQIMK True NCI_RA007_Epitope_Rep3 1217.6260492837698 1217.62441490379 30.769 3 -0.17046890303674278 0.041526524996177955 0.5370230676476149 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 97853 12525 SELPIVTPA True H1975_Epitope_Rep1 925.51204799401 925.51149496793 53.221 1 -0.17047848597015877 0.041526524996177955 0.5370523716009554 ['ENSG00000182481|ENST00000330459|KPNA2'] 47917 9089 IYIKQIKTF True NCI_RA007_Epitope_Rep4 1152.6906810623198 1152.6890249037901 41.793 3 -0.17051247726016425 0.041526524996177955 0.5371563008423983 ['ENSG00000103479|ENST00000262133|RBL2'] 23974 11566 EYMEHTYLI True NCI_RA007_Epitope_Rep3 1197.5376111188498 1197.53650993586 52.625 2 -0.17061481798803735 0.0415440473915536 0.5374690801808206 ['ENSG00000141447|ENST00000319481|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-2|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-4|OSBPL1A'] 67393 9325 LSSLVTLNK True NCI_RA007_Epitope_Rep3 973.58079626017 973.57968993586 43.778 2 -0.1706325061744704 0.0415440473915536 0.5375231199719088 ['ARHGEF7|p.S445Qfs*17|1|0.08|ENSG00000102606|chr13:111274773-111274774|-/CCTTCAAAAA|frameshift_variant', 'nc|ENSG00000102606|Q14155-2|ARHGEF7', 'nc|ENSG00000102606|Q14155-3|ARHGEF7', 'nc|ENSG00000102606|Q14155|ARHGEF7', 'ENSG00000102606|ENST00000646102|ARHGEF7', 'ENST00000491775.5_1_13:111806017-111861644:+|nuORF'] 55523 13926 LAGPAELL True H1975_Epitope_Rep3 782.4538048418999 782.4532549679301 58.88 1 -0.1706748063341591 0.041562362653111924 0.5376523289469769 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 38837 4348 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 22.073 2 -0.17077323913523826 0.04158067721470611 0.537952869666114 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 64252 13537 LPHGFTNMA True PC9_epitope_Rep1 986.4643866089401 986.46328993586 56.926 2 -0.1708507876297887 0.0416348211556099 0.5381895173665817 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 108748 12464 SYSGTFHSL True PC9_epitope_Rep3 997.4505103666099 997.44940993586 52.967 2 -0.17088553739639673 0.0416348211556099 0.5382955234626412 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1'] 38467 6521 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 33.754 2 -0.170890106203759 0.0416348211556099 0.5383094591768753 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 62061 9898 LLDTHRGLLY True H1975_Epitope_Rep3 1199.6662572196299 1199.6646149037902 43.104 3 -0.17089044056689523 0.0416348211556099 0.5383104790313791 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 103600 20032 SPSTFALSF True PC9_epitope_Rep5 955.4650978015899 955.46400993586 82.105 2 -0.1709212681889676 0.04165313258306743 0.5384044985812015 ['ENSG00000165379|ENST00000298119|LRFN5', 'LRFN5|p.E280Vfs*13|1|0.61|ENSG00000165379|chr14:41887463-41887475|GAAGAGTTTTTGT/-|frameshift_variant'] 69235 11097 LTSSSPIPR True PC9_epitope_Rep4 956.52909504048 956.52798993586 50.462 2 -0.17093493164225051 0.04167144331078757 0.5384461643187648 ['nc|ENSG00000165806|P55210-2|CASP7'] 8820 20699 AVEAQQFAL True PC9_epitope_Rep5 975.5025459394699 975.50144993586 84.676 2 -0.17097713060207173 0.04170806266717616 0.5385748249046244 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 38636 18682 HFIAEHYMF True PC9_epitope_Rep1 1193.53280052193 1193.5317099358601 76.651 2 -0.17104000967027852 0.04170806266717616 0.5387664749768117 ['ENSG00000143753|ENST00000323699|DEGS1', 'ENST00000498813.1_1_1:224377853-224378832:+|nuORF'] 70644 26819 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 110.91 3 -0.17106890832440633 0.04172557410874632 0.538854530641103 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 36515 19451 GVGPVNISV True PC9_epitope_Rep5 840.4705175352 840.46942993586 79.869 2 -0.17108660479567553 0.04172557410874632 0.5389084449126311 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 36500 12452 GVGLSSYL True H1975_Epitope_Rep3 794.4174193331801 794.4168749679301 53.089 1 -0.1712842107986533 0.04182030070878628 0.539510071836603 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 128763 9333 VPYPGMSNHEA True PC9_epitope_Rep5 1200.5233580370402 1200.52226993586 40.853 2 -0.17135830796046017 0.0418720152817574 0.5397354759285372 ['ENSG00000101213|ENST00000542869|PTK6'] 4214 13030 AIATELAQA True PC9_epitope_Rep4 886.4759968384598 886.47488993586 58.014 2 -0.1714048130900706 0.0418720152817574 0.5398768916713351 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 46704 16255 ITDVIIGFQ True NCI_RA007_Epitope_Rep1 1004.5542471591598 1004.55314993586 67.338 2 -0.17143459367673392 0.0418720152817574 0.5399674287966296 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 28968 15672 FTDVNKIYL True PC9_epitope_Rep6 1111.5913609438699 1111.59026993586 72.492 2 -0.171438730173957 0.0418720152817574 0.5399800029907806 ['ENSG00000101337|ENST00000398022|TM9SF4'] 45886 4497 ISDSEGFK True PC9_epitope_Rep4 881.4130622287299 881.41196993586 23.772 2 -0.17147624218463178 0.0418720152817574 0.5400940177866492 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 69245 4942 LTSVRVHV True NCI_RA007_Epitope_Rep1 909.5396001545299 909.53850993586 23.305 2 -0.17148166960013977 0.0418720152817574 0.5401105117721449 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 72576 22605 MLPSILNQL True PC9_epitope_Rep1 1027.57360270475 1027.5725099358601 91.759 2 -0.17150969810474676 0.0418720152817574 0.5401956818387169 ['nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3'] 6292 2612 APRGTGIVSA True PC9_epitope_Rep2 927.5137793295098 927.51268993586 14.706 2 -0.17151738369943872 0.041889517114914426 0.5402190334025422 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 16802 21942 EEVQSLPLPL True PC9_epitope_Rep2 1123.6124903112698 1123.6113899358602 89.876 2 -0.17153050259015404 0.041889517114914426 0.5402588906499924 ['ENSG00000145912|ENST00000274606|NHP2'] 22447 6889 ETERRMDFY True H1975_Epitope_Rep3 1245.54482175761 1245.54316490379 31.458 3 -0.17161048672149318 0.04190701761087978 0.5405018240606199 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 83136 9406 PSQPVVTEITK True NCI_RA007_Epitope_Rep5 1197.6605031328497 1197.6594099358601 42.819 2 -0.17163123317999393 0.04190701761087978 0.5405648167393402 ['nc|ENSG00000154134|Q96MS0-2|ROBO3', 'ENSG00000154134|ENST00000397801|ROBO3'] 15444 19016 EALFQPSFL True NCI_RA007_Epitope_Rep2 1050.53859709502 1050.53750993586 78.819 2 -0.17165982736972757 0.04194281566934698 0.5406516241027393 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 39550 18481 HLGGLVIGI True PC9_epitope_Rep3 877.53853752537 877.53744993586 76.295 2 -0.17167692429611273 0.04194281566934698 0.5407035201668156 ['ENST00000370272.8_1_1:93826284-93826383:+|nuORF'] 5913 15655 APGNPVLAV True PC9_epitope_Rep4 836.4756029156399 836.4750549679301 68.144 1 -0.17171376545604225 0.04194281566934698 0.5408153289621608 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 108797 18200 SYTSGLETL True PC9_epitope_Rep2 969.4654917244101 969.46494496793 75.313 1 -0.17175289197696444 0.04196111386989572 0.5409340451679506 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 64928 8108 LQEESDLELAK True H1975_Epitope_Rep3 1273.64016161109 1273.63906993586 36.163 2 -0.17193139398988608 0.04199369808077914 0.5414752773250947 ['nc|ENSG00000104131|O75822-3|EIF3J', 'ENSG00000104131|ENST00000261868|EIF3J', 'ENST00000558053.1_1_15:44846774-44849853:+|nuORF', 'nc|ENSG00000104131|O75822-2|EIF3J'] 126126 9085 VLEVLEDKEK True NCI_RA007_Epitope_Rep1 1200.66016877968 1200.65906993586 39.338 2 -0.17197027751170108 0.04199369808077914 0.5415930941649322 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1'] 96605 19578 SAGPEGLLGV True PC9_epitope_Rep4 898.4759968384599 898.47544496793 83.43 1 -0.17200473286332874 0.04199369808077914 0.5416974694010266 ['ENSG00000130935|ENST00000253247|NOL11', 'NOL11|p.L15M|1|0.25|ENSG00000130935|chr17:67717990-67717990|C/A|missense_variant', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 54134 16698 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5589699358602 69.477 2 -0.1720136804443547 0.04199369808077914 0.541724570481856 ['ENSG00000105372|ENST00000598742|RPS19'] 79130 6249 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 29.015 2 -0.17202306195393677 0.04199369808077914 0.5417529842235151 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 39466 16508 HLDATKLLL True PC9_epitope_Rep2 1022.61243074162 1022.61132993586 68.74 2 -0.17202844497454986 0.04199369808077914 0.541769286992834 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 53084 5203 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 25.03 2 -0.17204553685657709 0.04199369808077914 0.5418210469877943 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 129924 5982 VRSWRLREMKP True PC9_epitope_Rep1 1456.8085218625597 1456.80688490379 27.824 3 -0.1721393012434319 0.04205018523469427 0.5421048971774929 ['ENSG00000183304|ENST00000381003|FAM9A'] 120327 14756 VEEASAPATL True PC9_epitope_Rep4 986.4920408254198 986.49094993586 64.692 2 -0.17215448605426706 0.04206767491597922 0.5421508497723414 ['ENST00000471073.1_1_22:21354171-21355180:-|nuORF', 'ENSG00000184436|ENST00000215742|THAP7'] 55397 13899 LAESNDVAI True PC9_epitope_Rep2 930.4658260775799 930.46472993586 58.742 2 -0.17218267188941092 0.04206767491597922 0.5422361345523001 ['ENST00000425050.5_1_10:109631494-109803030:-|nuORF'] 6945 16347 AQIKPFYTV True PC9_epitope_Rep5 1065.5858816406098 1065.58478993586 67.876 2 -0.17227457825351278 0.04210265027113725 0.5425141185513195 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 20925 7940 EQMRLMDHNLK True NCI_RA007_Epitope_Rep1 1413.68568941821 1413.68404490379 34.877 3 -0.17227960072841877 0.04210265027113725 0.5425293050449594 ['ENST00000338274.4_1_2:26032960-26033152:-|nuORF'] 19465 8414 ELNLLKAQLNE True H1975_Epitope_Rep1 1283.7085159544297 1283.7074099358601 37.292 2 -0.17236258043933556 0.04210265027113725 0.5427801407628402 ['ENSG00000126777|ENST00000395314|KTN1'] 79113 5524 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 26.637 2 -0.17249984661985515 0.04210265027113725 0.5431947837905704 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 12078 20227 DHTVGFIL True PC9_epitope_Rep5 900.4705175351999 900.4699649679301 82.85 1 -0.17256498142320284 0.04212013594531638 0.5433914099929091 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 111398 14416 THSGYFSSL True PC9_epitope_Rep5 997.45051036661 997.44940993586 60.45 2 -0.1725787404947662 0.04212013594531638 0.5434329347476364 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2'] 76259 5001 NPKDNNQFASA True PC9_epitope_Rep5 1204.54726428576 1204.54616993586 24.269 2 -0.17278080564405995 0.042214797136038186 0.5440423408568184 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 91993 24500 RKREEEERRKQ True PC9_epitope_Rep2 1542.8338846632598 1542.83278993586 99.833 2 -0.17281224367170614 0.042232277526395176 0.5441370828584736 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 36935 13437 GVLSDLTK True H1975_Epitope_Rep3 831.47018318203 831.46908993586 56.956 2 -0.1728173750290949 0.042232277526395176 0.5441525449427281 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 70641 26450 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 109.34 3 -0.17296766564636873 0.04224975658183623 0.5446051802767309 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 31641 13694 GEFNFSEV True NCI_RA007_Epitope_Rep5 927.3974121645899 927.39630993586 59.357 2 -0.17297429346935098 0.04224975658183623 0.5446251313304061 ['nc|ENSG00000136193|Q12765-3|SCRN1', 'ENSG00000136193|ENST00000242059|SCRN1', 'nc|ENSG00000136193|Q12765-2|SCRN1'] 63129 13009 LLRGPAIL True H1975_Epitope_Rep2 851.5592729699499 851.55816993586 55.156 2 -0.17298853966962588 0.04226723430251427 0.5446680122860018 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF'] 27909 7652 FQEDSRSTL True PC9_epitope_Rep1 1081.50400249145 1081.50290993586 34.256 2 -0.1730010259481812 0.04226723430251427 0.5447055926172514 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 108596 22819 SYPDLLPTF True PC9_epitope_Rep3 1051.52261267771 1051.52207496793 93.043 1 -0.17305672349855808 0.042285517926005114 0.5448731899625509 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 134694 11126 VYTHVLSAF True NCI_RA007_Epitope_Rep3 1035.53893144819 1035.5378299358601 50.868 2 -0.17310435590525716 0.04229895588768635 0.5450164704674867 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000590387.1_1_18:21107838-21109292:+|nuORF'] 6195 17754 APNPVVFVA True PC9_epitope_Rep6 912.5069030439199 912.50580993586 80.925 2 -0.17315024506833757 0.04229895588768635 0.5451544650324658 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 142465 17615 YYGSAAEW True PC9_epitope_Rep3 945.3868474808899 945.3862949679301 72.943 1 -0.17324627681773888 0.04229895588768635 0.5454431106242537 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'nc|ENSG00000101158|Q8IXH7-3|NELFCD', 'ENST00000482747.1_1_20:57556337-57564148:+|nuORF', 'ENST00000464363.5_1_20:57556337-57561303:+|nuORF'] 101751 14924 SLNLYENQV True PC9_epitope_Rep1 1078.5294889633 1078.52838993586 62.227 2 -0.17324756969335794 0.04229895588768635 0.5454469954209183 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 87416 15866 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.4631649679301 65.837 1 -0.17328623072992747 0.04229895588768635 0.5455631477979859 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 17119 17391 EGLVQELQKKA True PC9_epitope_Rep4 1241.6979512707296 1241.6968499358602 74.896 2 -0.17329031473805076 0.04229895588768635 0.5455754159814852 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 34846 16722 GQISEVVVV True PC9_epitope_Rep6 928.5229470308799 928.52239496793 76.801 1 -0.17331730182071212 0.04229895588768635 0.5456564757354497 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 61284 19111 LIPPSLQGV True PC9_epitope_Rep4 922.5487678558999 922.54766993586 81.602 2 -0.17336340099888528 0.042316428394189844 0.5457949082775179 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 25969 21120 FGANAILGV True PC9_epitope_Rep1 860.4756029156399 860.4750549679301 86.068 1 -0.173372856491396 0.042316428394189844 0.5458232972583434 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 107713 6579 SVSDGIHSV True PC9_epitope_Rep4 899.4348603024702 899.43376993586 32.462 2 -0.17337683980423438 0.042333091575371226 0.5458352561478819 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 79119 4884 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 25.378 2 -0.1734991136102011 0.042333091575371226 0.5462021996546998 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 18188 11896 EILHFYKWTSP True NCI_RA007_Epitope_Rep1 1419.7186867153098 1419.7175899358601 50.255 2 -0.1735004272857396 0.042333091575371226 0.546206140386035 ['nc|ENSG00000197822|Q16625-3|OCLN', 'ENSG00000197822|ENST00000396442|OCLN', 'nc|ENSG00000197822|Q16625-2|OCLN'] 101925 19547 SLPVTIPSA True PC9_epitope_Rep5 883.5014833103099 883.5009349679301 80.24 1 -0.173557716061352 0.042348944616206724 0.546377960566511 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 38462 7012 HEPEPHIL True PC9_epitope_Rep4 970.4872302285 970.48612993586 34.219 2 -0.1735683499908242 0.042348944616206724 0.5464098466284135 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 83328 9427 PTEDELSLP True H1975_Epitope_Rep3 999.4760564081099 999.47547496793 41.262 1 -0.17360578564987883 0.042348944616206724 0.5465220803890664 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 112144 8465 TIYRKVYDQ True PC9_epitope_Rep4 1184.61897267404 1184.61733490379 40.03 3 -0.17361257870185234 0.042348944616206724 0.5465424432773656 ['ENSG00000107960|ENST00000224950|STN1'] 103043 17876 SPFTVGVAA True PC9_epitope_Rep3 847.4439684341899 847.44341496793 73.956 1 -0.17365644156942095 0.04236722074848757 0.5466739047756665 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 56052 5365 LASVPAGG True NCI_RA007_Epitope_Rep5 670.3649898374999 670.36444496793 27.326 1 -0.1736880949792253 0.042404580152671754 0.5467687495314838 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 127545 9345 VNRQAVAL True PC9_epitope_Rep1 869.5083000262498 869.50720993586 40.803 2 -0.1737136268354082 0.042420425921685365 0.5468452374423792 ['nc|ENSG00000198788|Q02817|MUC2'] 103958 15709 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51289496793 72.641 1 -0.17376671394132798 0.042420425921685365 0.547004233388541 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 84342 9928 PYVNNVPHL True NCI_RA007_Epitope_Rep4 1051.54507945779 1051.54398993586 45.032 2 -0.17378501523609594 0.042420425921685365 0.5470590327816193 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 79481 6331 PAYHSSLMD True NCI_RA007_Epitope_Rep3 1019.43823143075 1019.43712993586 31.908 2 -0.17378806819367634 0.042420425921685365 0.547068173574157 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 84234 20641 PYMAKFVVF True PC9_epitope_Rep2 1100.5728744287599 1100.5717699358602 84.83 2 -0.17384723091673585 0.04245697057588826 0.547245274688956 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 94815 6479 RSRFTPELQPK True NCI_RA007_Epitope_Rep3 1357.7466327986497 1357.74499490379 32.517 3 -0.17385351162351217 0.04245697057588826 0.5472640716217169 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1', 'ENST00000489540.1_1_6:30671361-30671724:-|nuORF'] 86772 20415 QLLNWVYLSL True PC9_epitope_Rep6 1247.69140933831 1247.6903099358601 91.23 2 -0.1740046253023993 0.04251016008089905 0.5477160879862112 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 44650 7021 ILSGVVTK True PC9_epitope_Rep4 815.51165407119 815.51054993586 34.256 2 -0.17401026412020867 0.04251016008089905 0.547732946175403 ['ENSG00000142534|ENST00000270625|RPS11'] 9600 11059 AYAGSGNVL True PC9_epitope_Rep4 850.41848196234 850.41793496793 50.315 1 -0.17404203145514574 0.04251016008089905 0.5478279080470713 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 8886 13971 AVFPSIVG True NCI_RA007_Epitope_Rep3 788.4432401582 788.44269496793 62.266 1 -0.17404453419582763 0.04251016008089905 0.5478353886137801 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 86136 7584 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep2 1118.4736312427299 1118.4725299358602 34.124 2 -0.1740465118360444 0.04251016008089905 0.5478412995927578 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 57803 7392 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 33.376 2 -0.17412146017672622 0.04252518315018315 0.5480652553222469 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 83325 9461 PTEDELSLP True H1975_Epitope_Rep2 999.4760564081099 999.47547496793 41.359 1 -0.1742329760288194 0.04252518315018315 0.5483982711646086 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 29265 16832 FVADGIFK True PC9_epitope_Rep5 895.4803539429099 895.47924993586 69.753 2 -0.17425193207858952 0.04252518315018315 0.5484548541092794 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 114282 11325 TPPPGLASA True PC9_epitope_Rep3 809.42831837005 809.4272299358599 48.568 2 -0.17427984358868512 0.04252518315018315 0.5485381555453562 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 124065 11825 VGSKTNLVTI True NCI_RA007_Epitope_Rep4 1030.60225998074 1030.60116993586 52.464 2 -0.17429098488511208 0.04252518315018315 0.5485714021833517 ['ST8SIA6|p.K302Sfs*3|1|0.09|ENSG00000148488|chr10:17321172-17321172|G/-|frameshift_variant', 'ENSG00000148488|ENST00000377602|ST8SIA6'] 34892 17783 GQLSDLVVV True PC9_epitope_Rep4 928.52294703088 928.52239496793 76.431 1 -0.17434825644094015 0.042536957558416785 0.5487422662711325 ['ENST00000511288.1_1_17:48545715-48548505:+|nuORF', 'ENST00000506085.5_1_17:48545715-48551043:+|nuORF'] 96777 11757 SAPSPGLSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 50.557 2 -0.17435961486370408 0.042536957558416785 0.5487761451674341 ['ENST00000333483.14_1_17:60501366-60501510:+|nuORF'] 64903 13267 LQEDPPVGV True PC9_epitope_Rep4 952.4865615221598 952.48601496793 58.929 1 -0.17437210701514738 0.042536957558416785 0.5488134026481246 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 131249 6693 VTFEERDKCP True H1975_Epitope_Rep3 1222.5652228490198 1222.5635849037901 30.699 3 -0.17438991802946233 0.042536957558416785 0.548866518045862 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 58706 8095 LERRLWEENRR True NCI_RA007_Epitope_Rep5 1555.8331563872696 1555.83151490379 37.827 3 -0.17439151956216306 0.042536957558416785 0.5488712937686152 ['ENSG00000109265|ENST00000682029|CRACD'] 110286 3543 TESHNSRKKRE True NCI_RA007_Epitope_Rep2 1370.70147351138 1370.6998349037901 18.433 3 -0.17443024490673542 0.042536957558416785 0.5489867558484454 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 80044 5057 PFHDSEVR True NCI_RA007_Epitope_Rep3 985.46174375665 985.46064993586 26.886 2 -0.17448327593469756 0.042536957558416785 0.5491448221524647 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF'] 118476 19983 TYPNTYIF True PC9_epitope_Rep4 1017.48074786573 1017.47964993586 84.997 2 -0.1745322680419311 0.042536957558416785 0.5492907994333752 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 82611 7496 PQEVGQSI True PC9_epitope_Rep4 856.42904664604 856.4279499358599 36.196 2 -0.17454389525267555 0.042536957558416785 0.5493254368440385 ['ENST00000242770.9_1_19:13255392-13255605:-|nuORF'] 77725 13695 NTLGVTVLS True PC9_epitope_Rep2 902.50729696674 902.5067449679301 57.968 1 -0.1746031733514547 0.04255278567205173 0.5495019835478717 ['ENSG00000100104|ENST00000215917|SRRD'] 106143 11055 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.46057496793 47.553 1 -0.17461625017215623 0.04255278567205173 0.549540920393909 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 6033 16515 APLAIPSAAA True PC9_epitope_Rep2 880.50181766348 880.50072993586 68.766 2 -0.17466411847555358 0.04255278567205173 0.5496834209743613 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 38468 6601 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 34.099 2 -0.17468356751826303 0.04255278567205173 0.5497413061483997 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 71786 5226 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 25.169 2 -0.17468920449321657 0.042571047110432955 0.549758081750717 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 101361 22663 SLITSELIV True PC9_epitope_Rep4 973.56956287013 973.56846993586 95.402 2 -0.17469566464100333 0.04258605893010394 0.5497773063181605 ['ENSG00000137561|ENST00000260116|TTPA'] 19214 16872 ELILWEDESY True H1975_Epitope_Rep2 1295.59214878951 1295.5910499358602 70.144 2 -0.174713964839599 0.04258605893010394 0.549831760757715 ['ENST00000448841.5_1_10:104573393-104573648:+|nuORF'] 21528 12664 ERMPEQIRL True PC9_epitope_Rep3 1170.61792712822 1170.61682993586 53.736 2 -0.1747600590519726 0.04258605893010394 0.5499688895205289 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 111158 12064 THGGLVTGL True PC9_epitope_Rep3 853.46576650793 853.46466993586 51.447 2 -0.17478232038751465 0.04258605893010394 0.5500351008185866 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 43377 5495 IGASHCWK True NCI_RA007_Epitope_Rep5 900.4276071774 900.4265099358599 27.825 2 -0.17480425588070833 0.04258605893010394 0.5501003331288572 ['ENST00000608756.5_1_3:122145799-122145940:+|nuORF'] 35455 4654 GSHSMRYFS True NCI_RA007_Epitope_Rep3 1070.4603638576598 1070.4592699358602 25.23 2 -0.17482557858252945 0.04260269270376445 0.5501637337358231 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G'] 63309 12567 LLSTVAELIY True H1975_Epitope_Rep1 1120.63797678312 1120.6368699358602 53.385 2 -0.17487292879658706 0.04260269270376445 0.550304491115432 ['chr2:142812388-142885349|114|16.36|0.04|8.65|+|1|TE_info:L1PA16,L1PA16_dup1542,L1,LINE,donor,-,142812304,142812388|None,KYNU|3'] 68132 4731 LTDPRGAQAHY True H1975_Epitope_Rep2 1227.5996342117899 1227.5979749037901 23.291 3 -0.1748789003176481 0.04260269270376445 0.5503222393425301 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 91996 7784 RKREIEELL True NCI_RA007_Epitope_Rep4 1184.6877209401998 1184.68606490379 36.623 3 -0.17508911397437696 0.04261851187979101 0.550946561974525 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 24128 23841 EYPFILDAF True PC9_epitope_Rep2 1113.5382627418498 1113.53767496793 97.175 1 -0.17510575311925422 0.04261851187979101 0.5509959407898056 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 114112 19155 TPGLFYII True H1975_Epitope_Rep3 922.5164050984599 922.5158549679301 80.323 1 -0.17510761662623023 0.04261851187979101 0.5510014706356742 ['ENST00000369651.7_1_6:86204486-86204609:+|nuORF'] 4309 21315 AIIGGMFTV True PC9_epitope_Rep4 907.48372507119 907.48262993586 90.154 2 -0.17514210654946452 0.04261851187979101 0.5511038046155493 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 114675 9976 TQFGGKRPFGV True PC9_epitope_Rep4 1192.63529144452 1192.6336349037902 46.033 3 -0.17522450978128404 0.04263514157689008 0.5513482021901488 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 132081 16275 VTTQSLLF True H1975_Epitope_Rep1 907.5014833103098 907.5009349679301 67.955 1 -0.17527199152092765 0.04263514157689008 0.5514889639047493 ['ENSG00000186910|ENST00000334708|SERPINA11'] 79903 4938 PEPNHVTEASE True H1975_Epitope_Rep3 1208.5309455152799 1208.52984993586 24.122 2 -0.17527941257037793 0.04263514157689008 0.5515109597596347 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000587504.5_1_17:73835995-73839803:-|nuORF', 'nc|ENSG00000092929|Q70J99-2|UNC13D', 'ENST00000591563.5_1_17:73836050-73840487:-|nuORF', 'ENST00000585574.5_1_17:73837076-73839803:-|nuORF', 'UNC13D|p.I195Tfs*54|1|0.21|ENSG00000092929|chr17:75840987-75840987|A/-|frameshift_variant'] 76787 14416 NRAEYYHLL True PC9_epitope_Rep3 1177.58800689893 1177.58635490379 60.555 3 -0.17528546110808435 0.04265258260720346 0.5515288866798491 ['ENSG00000100393|ENST00000263253|EP300'] 53071 4563 KPPPPPPPP True PC9_epitope_Rep2 922.5276384884999 922.52654993586 22.921 2 -0.17532538845332601 0.04265258260720346 0.5516472062701253 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 136141 9896 WRRAWWGL True NCI_RA007_Epitope_Rep3 1129.59336706289 1129.5917249037902 46.006 3 -0.1754213395291331 0.04270896888346553 0.5519314112553324 ['ENST00000545797.6_1_19:3958504-3958831:-|nuORF'] 91128 13628 RFVEKYTEL True PC9_epitope_Rep5 1183.62372370131 1183.62208490379 57.443 3 -0.1754732270693584 0.04273895306721568 0.5520850222104621 ['ENSG00000181610|ENST00000313608|MRPS23'] 20389 17169 EPAIQGVLD True PC9_epitope_Rep5 940.4865615221598 940.48601496793 71.061 1 -0.1754955614664974 0.04273895306721568 0.5521511252387494 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 34626 11715 GPWSRSLSA True PC9_epitope_Rep5 959.4824792012299 959.48138993586 50.06 2 -0.17551457158069955 0.04273895306721568 0.5522073813125499 ['ENSG00000039068|ENST00000261769|CDH1', 'nc|ENSG00000039068|P12830-2|CDH1'] 106514 16261 STLPDVTEV True PC9_epitope_Rep6 959.48114178855 959.4805949679301 74.912 1 -0.1755345366015346 0.04273895306721568 0.5522664552038289 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 78844 19388 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.4219549679301 79.387 1 -0.17553879041023 0.04273895306721568 0.5522790406079134 ['ENSG00000163807|ENST00000296121|KIAA1143'] 60766 7024 LHSEVLSP True H1975_Epitope_Rep2 880.46543215476 880.46432993586 31.943 2 -0.1755529629268874 0.04273895306721568 0.5523209690116951 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 134590 13265 VYSHFNETL True PC9_epitope_Rep1 1108.5189242796 1108.5178299358602 55.889 2 -0.1755588752581583 0.04273895306721568 0.5523384590089923 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 35063 8260 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42883496793 39.233 1 -0.17557840394334318 0.04273895306721568 0.5523962241057281 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 91731 5578 RKEDNDEI True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 29.501 2 -0.17560807809506565 0.04273895306721568 0.5524839840531939 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 97854 12533 SELPIVTPA True H1975_Epitope_Rep2 925.51204799401 925.51149496793 53.302 1 -0.1756132400455594 0.04273895306721568 0.5524992484319541 ['ENSG00000182481|ENST00000330459|KPNA2'] 58544 6418 LEQKVELAQ True H1975_Epitope_Rep2 1056.5815245361598 1056.5804299358601 29.609 2 -0.17571685168193313 0.04275638581776592 0.5528055216087253 ['ENSG00000100941|ENST00000216832|PNN', 'ENST00000557680.1_1_14:39648378-39651535:+|nuORF'] 134462 10795 VYPPPHQVF True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 52.361 2 -0.17572603673887124 0.04275638581776592 0.5528326616889622 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF'] 128631 10259 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43833496793 44.411 1 -0.17575947017967175 0.04279124733150351 0.5529314363628398 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 132680 4737 VVGPSHEV True PC9_epitope_Rep5 822.42356734278 822.42246993586 23.27 2 -0.17578321274985986 0.04279124733150351 0.5530015666069839 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 36513 19502 GVGPVNISV True PC9_epitope_Rep3 840.4705175352 840.46942993586 80.247 2 -0.17578593348649219 0.04279124733150351 0.5530096023100121 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 57330 8439 LEAEGGAKTLS True NCI_RA007_Epitope_Rep1 1074.5557037111398 1074.55460993586 36.824 2 -0.17580274041139546 0.04279124733150351 0.5530592382128225 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 12300 19614 DINLILALS True PC9_epitope_Rep6 970.5698972233 970.5693449679301 88.106 1 -0.17583319777782916 0.042827736057637324 0.5531491730760573 ['ENST00000502604.5_2_5:68550491-68551353:+|nuORF'] 49534 9290 KFIDTTSKF True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 43.34 2 -0.17584518552682912 0.042827736057637324 0.5531845653719951 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 56735 8133 LDLGSGVK True PC9_epitope_Rep3 787.44396843419 787.44286993586 36.261 2 -0.17586824312516292 0.04284108017456597 0.5532526316134697 ['ENST00000494039.1_X:52241120-52243863:+|nuORF', 'ENSG00000204382|ENST00000375616|XAGE1B', 'ENSG00000204379|ENST00000375602|XAGE1A', 'chrX:52515573-52520709|381|19.18|0.09|7.67|-|ENST00000518075|XAGE1B,XAGE1B'] 89199 11651 QVSSINVSV True PC9_epitope_Rep2 931.49746055903 931.49636993586 50.145 2 -0.17587004412078738 0.04284108017456597 0.5532579477052639 ['ENSG00000113721|ENST00000261799|PDGFRB', 'nc|ENSG00000113721|P09619-2|PDGFRB'] 66345 5642 LSGCTCRWR True NCI_RA007_Epitope_Rep3 1080.49570382056 1080.4946099358601 29.182 2 -0.17589152549287526 0.04284108017456597 0.553321350198122 ['ENST00000584408.5_1_17:80407084-80408584:-|nuORF'] 78313 8235 NYIPVKNGKQF True PC9_epitope_Rep2 1306.70337100434 1306.70173490379 37.032 3 -0.1759095232758654 0.04284108017456597 0.5533744634770141 ['ENSG00000095951|ENST00000379388|HIVEP1'] 120852 6770 VELSGAERERP True NCI_RA007_Epitope_Rep1 1241.63641364333 1241.63530993586 30.342 2 -0.17592172933157507 0.04284108017456597 0.5534104809602243 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-2|NUP160', 'ENST00000529863.1_1_11:47861610-47869870:-|nuORF', 'NUP160|p.I186Vfs*5|1|0.23|ENSG00000030066|chr11:47840035-47840036|-/TGAC|frameshift_variant'] 139543 17783 YLTFYDNVQSY True H1975_Epitope_Rep2 1411.62959692739 1411.6284899358602 73.724 2 -0.17594581438373783 0.04284108017456597 0.5534815417786779 ['SLC38A1|p.D340Y|1|0.4|ENSG00000111371|chr12:46198729-46198729|C/A|missense_variant'] 32315 3660 GFEDLERGRRE True NCI_RA007_Epitope_Rep1 1362.6640253734997 1362.66238490379 18.188 3 -0.17594809474286408 0.04284108017456597 0.5534882691531003 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 130461 14788 VSPASFENV True PC9_epitope_Rep6 948.45526139388 948.45416993586 68.848 2 -0.17604320454530306 0.04285687062903748 0.5537687600463413 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 69775 7764 LVFRNGDA True PC9_epitope_Rep1 890.4610154806599 890.45990993586 34.686 2 -0.17612924679562467 0.04285687062903748 0.5540223475808471 ['ENSG00000183066|ENST00000328823|WBP2NL'] 75745 19094 NLLILYDAI True PC9_epitope_Rep3 1046.6011973515801 1046.60010993586 78.668 2 -0.176165858170721 0.04285687062903748 0.5541302035162268 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 67496 10149 LSSVVTVPS True NCI_RA007_Epitope_Rep5 887.49639792987 887.4958449679301 45.671 1 -0.17616803265439474 0.04285687062903748 0.5541366085969305 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 33012 15179 GIGTEIIQV True PC9_epitope_Rep2 928.5229470308799 928.52184993586 63.643 2 -0.1764240458720519 0.04297038759099051 0.5548900222624721 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant', 'FAT3|p.H1979Tfs*13|1|0.35|ENSG00000165323|chr11:92799397-92799397|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7-2|FAT3', 'FAT3-DPP3|1|fusion'] 7656 14756 ASILTESVL True H1975_Epitope_Rep3 931.52261267771 931.5220649679301 62.137 1 -0.17644173108327027 0.04298862402103699 0.5549420169576542 ['nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B', 'ENST00000520794.1_1_5:179290450-179293075:-|nuORF'] 79329 5340 PARLPAAPA True PC9_epitope_Rep4 862.5024863698198 862.50138993586 27.257 2 -0.17648102662287005 0.04300685975609756 0.5550575227870589 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 82008 19545 PLVENLLKD True PC9_epitope_Rep2 1039.5913609438699 1039.59026993586 80.563 2 -0.17652395244684208 0.043043329141419916 0.5551836625459563 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 25235 13679 FDIAEGVRTVL True H1975_Epitope_Rep1 1218.66083748602 1218.6597499358602 57.752 2 -0.17652524022919433 0.043043329141419916 0.5551874461643412 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 61712 12211 LKYRYDTEI True PC9_epitope_Rep2 1199.6186383208699 1199.61700490379 52.281 3 -0.1765888389663779 0.04307979574727536 0.5553742615924964 ['ENSG00000139618|ENST00000380152|BRCA2'] 88726 18390 QTIALITYL True H1975_Epitope_Rep3 1034.60119735158 1034.60010993586 77.092 2 -0.176623355430495 0.04307979574727536 0.5554756149823457 ['ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 59993 4172 LGIHEDSTNR True PC9_epitope_Rep5 1140.5523496662001 1140.5506949037901 21.121 3 -0.17666357242394878 0.0430947436605765 0.555593675712744 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 79112 5340 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 25.928 2 -0.17666775129031478 0.0430947436605765 0.5556059412146275 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 65341 17525 LRDGQILEL True PC9_epitope_Rep2 1055.59750895347 1055.59697496793 72.673 1 -0.17668320114129918 0.0430947436605765 0.5556512852954636 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 75932 10896 NLSIFDPPP True PC9_epitope_Rep5 998.5072969667399 998.50618993586 46.899 2 -0.17670977267556304 0.0430947436605765 0.555729258889064 ['nc|ENSG00000163600|Q9Y6W8-2|ICOS', 'ENSG00000163600|ENST00000316386|ICOS'] 80828 4224 PHPPPPPPP True NCI_RA007_Epitope_Rep5 931.49158733295 931.49048993586 22.785 2 -0.17674571968913583 0.0430947436605765 0.555834720982 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8'] 79111 5248 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 25.575 2 -0.1768099732184013 0.04313038177246056 0.5560231615330277 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 134090 11498 VYKTIMEQF True NCI_RA007_Epitope_Rep3 1157.57908200801 1157.5779899358602 52.341 2 -0.17684229729298093 0.04313038177246056 0.5561179275744617 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 103314 9518 SPLSTPTSA True PC9_epitope_Rep3 859.42871229287 859.42760993586 41.558 2 -0.17689114035231035 0.04313038177246056 0.5562610812934837 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'CD320|p.A240Qfs*29|1|0.16|ENSG00000167775|chr19:8302594-8302594|C/-|frameshift_variant', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 135707 6741 WLRRGWRTRWR True H1975_Epitope_Rep3 1627.9072648173897 1627.90561490379 30.883 3 -0.17691502984383234 0.04314532258986228 0.5563310804622584 ['ENST00000431489.5_1_2:62933068-62933182:+|nuORF'] 102986 15688 SPFGSITSA True PC9_epitope_Rep4 865.4181476091701 865.41704993586 68.271 2 -0.17694968786625295 0.04314532258986228 0.5564326113200415 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 101017 16988 SLGAGFDSL True PC9_epitope_Rep3 865.41814760917 865.41704993586 70.505 2 -0.17698323710244138 0.04314532258986228 0.5565308697878284 ['ENSG00000168806|ENST00000305641|LCMT2'] 22874 6552 EVDEYRRHWWR True NCI_RA007_Epitope_Rep1 1630.7753071579798 1630.7736749037902 29.5 3 -0.17698409842249221 0.04314532258986228 0.5565333920947169 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN'] 91910 4443 RKLKNFKTL True NCI_RA007_Epitope_Rep4 1146.7237125261 1146.7220549037902 23.459 3 -0.17702847727730586 0.04314532258986228 0.5566633307707376 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 70146 14504 LVPPDQPEV True PC9_epitope_Rep5 992.51786165044 992.51676993586 60.789 2 -0.17709024942479226 0.04316354908758429 0.5568441265229207 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 89213 14638 QVTNEFQTV True PC9_epitope_Rep5 1064.51383889916 1064.5132749679299 61.306 1 -0.17710231463578655 0.04317437342881085 0.5568794297385008 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 110379 8738 TEVGWFRNK True NCI_RA007_Epitope_Rep5 1135.57744221523 1135.5763499358602 40.277 2 -0.17710625812016426 0.04317437342881085 0.5568909678374979 ['ENST00000427183.6_1_2:242204008-242206250:-|nuORF'] 125852 14366 VLAGTMATVV True PC9_epitope_Rep3 960.5314035396 960.53030993586 60.351 2 -0.1771381632975468 0.04317437342881085 0.5569843059097654 ['CDHR1|p.A801Rfs*40|1|0.28|ENSG00000148600|chr10:84214441-84214441|G/-|frameshift_variant', 'ENSG00000148600|ENST00000623527|CDHR1', 'ENST00000459673.1_1_10:85972822-85974374:+|nuORF'] 104088 16788 SQDTSFTTL True PC9_epitope_Rep5 998.4556553167 998.4551049679301 69.581 1 -0.17717217072722272 0.04317437342881085 0.5570837702868512 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 65162 9609 LQPGCRQTCY True PC9_epitope_Rep3 1167.51649883479 1167.5154099358601 41.912 2 -0.1771806774006448 0.04317437342881085 0.5571086466248687 ['ENSG00000183153|ENST00000578689|GJD3', 'nc|ENSG00000183153|Q8N144-2|GJD3'] 45739 9319 IRYPDSHQL True PC9_epitope_Rep3 1127.57235683479 1127.57071490379 40.787 3 -0.17721050114573217 0.04317437342881085 0.5571958490087415 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2'] 75150 6706 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59746993586 31.203 2 -0.17724921913324126 0.04317437342881085 0.5573090292639182 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 133460 17720 VVYQDGFYGA True PC9_epitope_Rep2 1117.50802524273 1117.5069299358602 73.441 2 -0.17728015616908968 0.04317437342881085 0.5573994413399728 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 17625 15639 EHIPESPYL True PC9_epitope_Rep5 1083.52367530687 1083.52256993586 65.166 2 -0.17728855541396155 0.04317437342881085 0.5574239842316067 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'FLNB|p.P2279L|1|0.08|ENSG00000136068|chr3:58156023-58156023|C/T|missense_variant'] 106414 3295 STIGPEGVHQK True NCI_RA007_Epitope_Rep5 1151.5934862021898 1151.5918349037902 18.197 3 -0.17731138193235835 0.04317437342881085 0.5574906765347762 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 102229 20078 SLSFDPLLI True PC9_epitope_Rep6 1003.5589981864299 1003.55790993586 89.906 2 -0.17734462816555524 0.04319177299561988 0.5575877922777689 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL'] 117775 6033 TVVTPDDVRYF True H1975_Epitope_Rep1 1310.65066672514 1310.6495699358602 28.277 2 -0.1773592105490564 0.04319177299561988 0.557630381515403 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1'] 142464 15197 YYGQGFPSF True NCI_RA007_Epitope_Rep3 1064.4603467743198 1064.45924993586 67.299 2 -0.17756050536474835 0.043285344302254725 0.5582178179035541 ['ENSG00000147459|ENST00000276440|DOCK5', 'ENST00000467709.6_1_8:25227083-25246387:+|nuORF', 'ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 131280 14791 VTFYPQDAP True PC9_epitope_Rep6 1036.4865615221597 1036.48546993586 68.861 2 -0.17759756785131572 0.043285344302254725 0.5583258823842338 ['ENSG00000128965|ENST00000617768|CHAC1'] 102928 5987 SPDGNRFATA True PC9_epitope_Rep5 1034.47812209678 1034.4770299358602 28.024 2 -0.17764123389397363 0.04329449394562486 0.5584531632927668 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF', 'ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 131348 14439 VTGPRRQPWF True PC9_epitope_Rep3 1242.6621748986997 1242.66052490379 60.646 3 -0.17767491110665815 0.04329449394562486 0.5585513000845992 ['ENST00000507297.5_1_5:138861213-138862139:-|nuORF', 'ENST00000514348.1_1_5:138861213-138862244:-|nuORF'] 60531 9131 LHDINAQM True PC9_epitope_Rep3 940.4436511643601 940.44254993586 40.06 2 -0.1776870327881566 0.04329449394562486 0.5585866172031495 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 104497 7491 SQMEQFPVK True NCI_RA007_Epitope_Rep4 1092.5273807883198 1092.5262899358602 35.46 2 -0.17769852752784154 0.04329449394562486 0.5586201047786375 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000461189.1_1_2:230659893-230661399:-|nuORF'] 85631 5761 QGKYPEVH True NCI_RA007_Epitope_Rep5 956.4715801643599 956.47048993586 28.846 2 -0.17771742319013864 0.04329449394562486 0.5586751472574212 ['ENSG00000022840|ENST00000325954|RNF10', 'nc|ENSG00000022840|Q8N5U6-2|RNF10'] 6005 21248 APIRGFWIV True PC9_epitope_Rep5 1057.6072857915299 1057.6061899358601 86.781 2 -0.17776747379331678 0.04329449394562486 0.5588209059993035 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88', 'ENST00000570937.1_1_17:5294807-5298221:-|nuORF', 'ENST00000576862.5_1_17:5290923-5298221:-|nuORF'] 142 8534 AADDSKLVL True NCI_RA007_Epitope_Rep4 930.5022115863 930.50110993586 39.619 2 -0.17777683600876923 0.04329449394562486 0.5588481649145454 ['nc|ENSG00000153046|Q9Y232-3|CDYL', 'ENST00000472453.5_1_6:4776866-4954287:+|nuORF', 'nc|ENSG00000153046|Q9Y232-4|CDYL', 'ENSG00000172352|ENST00000382407|CDY1B', 'ENSG00000182415|ENST00000250838|CDY2A', 'ENSG00000129873|ENST00000382867|CDY2B', 'ENSG00000153046|ENST00000397588|CDYL', 'ENSG00000172288|ENST00000306609|CDY1', 'nc|ENSG00000153046|Q9Y232|CDYL'] 79330 5510 PARLPAAPA True PC9_epitope_Rep4 862.5024863698198 862.50138993586 27.953 2 -0.17777811992306303 0.04329449394562486 0.5588519029969852 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 120393 4569 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 22.696 2 -0.17779381929004362 0.04329449394562486 0.5588976084168089 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 93202 4914 RPPPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 24.267 2 -0.17779505790462302 0.04329449394562486 0.5589012141578739 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 20637 16022 EPVVHGDIIV True H1975_Epitope_Rep2 1076.5866099165999 1076.58550993586 66.827 2 -0.17780395385931266 0.04329449394562486 0.5589271102734346 ['ENSG00000175065|ENST00000308128|DSG4', 'nc|ENSG00000175065|Q86SJ6-2|DSG4'] 43868 4869 IHSSSTVL True PC9_epitope_Rep2 842.44978209062 842.44868993586 24.096 2 -0.17782699458216156 0.04329449394562486 0.5589941738674377 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 66904 13348 LSNLTHLELIG True NCI_RA007_Epitope_Rep2 1208.6764875501601 1208.67538993586 56.559 2 -0.17786372519781815 0.043312708234174206 0.5591010603500224 ['ENSG00000197147|ENST00000330947|LRRC8B'] 55118 15600 LAAATATFAAA True PC9_epitope_Rep5 977.5181960036099 977.51708993586 65.015 2 -0.17790851761298512 0.043368998210410084 0.5592313673628377 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 118313 15905 TYLTSIPSL True NCI_RA007_Epitope_Rep4 993.53826274185 993.53716993586 69.05 2 -0.17798644664113497 0.04338638440450807 0.559457969844141 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L'] 15160 3911 EAAKEALEA True H1975_Epitope_Rep3 930.4658260775799 930.46472993586 20.165 2 -0.17801853992366082 0.04338638440450807 0.559551252700721 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 33989 16784 GLSTVTLVGI True PC9_epitope_Rep2 958.5698972232999 958.56880993586 69.808 2 -0.17807489823914052 0.043398812243033345 0.5597150107342738 ['nc|ENSG00000162493|Q86YL7-2|PDPN', 'nc|ENSG00000162493|Q86YL7-5|PDPN', 'nc|ENSG00000162493|Q86YL7-6|PDPN', 'ENSG00000162493|ENST00000621990|PDPN', 'nc|ENSG00000162493|Q86YL7-4|PDPN', 'nc|ENSG00000162493|Q86YL7-3|PDPN'] 46584 8276 ITAPPGTAA True PC9_epitope_Rep5 797.42831837005 797.4272299358599 36.772 2 -0.17808469188236226 0.043398812243033345 0.5597434607014905 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 115678 17490 TSAESFVNV True PC9_epitope_Rep1 952.45017601344 952.44906993586 72.069 2 -0.17813665555535033 0.043398812243033345 0.5598943773739433 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 117683 21381 TVTSVLTSV True PC9_epitope_Rep5 905.50696261357 905.50586993586 87.303 2 -0.17814919180875885 0.043398812243033345 0.5599307773002548 ['ENSG00000106689|ENST00000373615|LHX2'] 140855 17622 YSDSGLFGIY True H1975_Epitope_Rep2 1120.5076908895599 1120.50717496793 73.1 1 -0.17815858089849645 0.043398812243033345 0.5599580369730185 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'UQCRC2|p.L444Ffs*8|1|0.28|ENSG00000140740|chr16:21983137-21983138|-/T|frameshift_variant', 'ENSG00000140740|ENST00000268379|UQCRC2'] 120391 4287 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 21.605 2 -0.17817459774292738 0.043398812243033345 0.5600045348202582 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 89416 16600 QYASLMHSF True PC9_epitope_Rep2 1082.48551597634 1082.4844099358602 69.094 2 -0.1782145950355196 0.043398812243033345 0.5601206249939097 ['ENSG00000125971|ENST00000357156|DYNLRB1', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 102689 13865 SLYSDCIIE True H1975_Epitope_Rep2 1041.4688628526899 1041.4677699358601 58.477 2 -0.17827069033102266 0.043398812243033345 0.5602833802360617 ['nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'nc|ENSG00000162105|Q9UPX8-2|SHANK2'] 137466 12993 YEDSGIPLPA True H1975_Epitope_Rep3 1060.5076908895599 1060.50717496793 55.211 1 -0.17831995443248105 0.043417020385632984 0.5604262589305862 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 101908 17537 SLPTAPLAP True PC9_epitope_Rep2 865.49091862661 865.48982993586 72.724 2 -0.1783973465179565 0.043453434591446356 0.5606506092883763 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 106438 6152 STIPPELVKQK True NCI_RA007_Epitope_Rep4 1238.72343774258 1238.7217949037902 30.275 3 -0.1784105461527425 0.043453434591446356 0.560688860402338 ['ENSG00000058729|ENST00000283109|RIOK2'] 39805 17519 HMVMADIYL True PC9_epitope_Rep6 1091.5143735764698 1091.51326993586 80.018 2 -0.1785112398706841 0.04350308289563827 0.5609805346593278 ['nc|ENSG00000290649|Q8NH63|OR51H1'] 33416 8120 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44286993586 36.183 2 -0.1785122140344335 0.04350308289563827 0.5609833553862887 ['ENSG00000170684|ENST00000303809|ZNF296'] 13483 10165 DNIQTVKRLRT True PC9_epitope_Rep1 1342.7680965192199 1342.76644490379 43.975 3 -0.17854028762858756 0.04350308289563827 0.5610646345892302 110176 9166 TEPSNVTTI True NCI_RA007_Epitope_Rep3 960.47639076128 960.47528993586 43.142 2 -0.17854585761076755 0.04350308289563827 0.5610807588568162 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 118530 10229 TYQDRLTKL True PC9_epitope_Rep5 1136.61897267404 1136.61733490379 44.334 3 -0.1785854078138726 0.04350308289563827 0.5611952312579166 ['ENST00000519879.1_1_8:118533115-118541135:+|nuORF', 'nc|ENSG00000164758|Q96HR3-2|MED30', 'ENSG00000164758|ENST00000297347|MED30'] 142313 13872 YYDPKHVIF True PC9_epitope_Rep4 1180.59169529704 1180.5900449037902 61.26 3 -0.17865019854387057 0.04350308289563827 0.56138268467861 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 20136 12496 ENALVGDVI True PC9_epitope_Rep4 928.48656152216 928.48546993586 55.876 2 -0.17870819050073558 0.04350308289563827 0.5615503896893692 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 59465 9180 LFQEREHVLRL True NCI_RA007_Epitope_Rep4 1438.80448202794 1438.80283490379 42.151 3 -0.17872120610026143 0.04350308289563827 0.5615880189208672 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 131846 8218 VTQVADGSLIN True H1975_Epitope_Rep3 1115.5822528121498 1115.5811499358601 36.593 2 -0.17874479724828618 0.04350308289563827 0.5616562134953078 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENST00000469614.1_1_7:4828357-4829561:+|nuORF', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 73699 12461 MYQEHINEI True PC9_epitope_Rep5 1175.52810906431 1175.5270099358602 52.931 2 -0.1788045594870123 0.04355934461169575 0.561828912524907 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 58251 7809 LELPARGG True PC9_epitope_Rep3 811.4552018242299 811.45410993586 35.029 2 -0.17884541633037956 0.0435767159521227 0.5619469341014983 ['ENST00000359523.6_1_1:167734946-167741561:+|nuORF'] 39573 5965 HLHHGKVRRNF True PC9_epitope_Rep2 1399.7697682850696 1399.76812490379 28.332 3 -0.1788862835821711 0.0435767159521227 0.5620649489551313 ['ENST00000589825.5_1_17:42960950-42971889:-|nuORF'] 131222 5184 VTESDLSR True NCI_RA007_Epitope_Rep5 905.44542498617 905.44432993586 26.634 2 -0.1789560448435339 0.04359491551225453 0.5622663176991313 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'ENST00000460094.1_1_9:138758268-138774700:-|nuORF', 'ENST00000312405.10_1_9:138742295-138774724:-|nuORF'] 106759 6754 STYRDFQQA True PC9_epitope_Rep4 1114.50433684462 1114.5032299358602 33.175 2 -0.17902250829382155 0.043613114379768995 0.5624580672138707 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.S39G|1|0.41|ENSG00000125676|chrX:123712865-123712865|T/C|missense_variant'] 78547 10536 NYQGHFHLF True NCI_RA007_Epitope_Rep5 1161.5355774032498 1161.53392490379 47.16 3 -0.1791205588539037 0.043631312554705634 0.5627407683234034 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 72321 19404 MILDEVHTI True PC9_epitope_Rep3 1069.54778187973 1069.54668993586 79.862 2 -0.17920966806893812 0.04370659309295024 0.5629975048267237 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 102033 6861 SLQTNEAP True PC9_epitope_Rep2 858.4083112014599 858.40720993586 31.794 2 -0.17927696040907234 0.04374048706240487 0.5631912669632588 ['nc|ENSG00000130821|P48029-2|SLC6A8'] 164 13509 AADPVSPLL True NCI_RA007_Epitope_Rep4 881.4858332461699 881.48472993586 59.17 2 -0.17928430161574915 0.04374048706240487 0.5632123992086504 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 24301 21645 EYTSILHLF True PC9_epitope_Rep2 1121.57571087973 1121.57460993586 88.732 2 -0.1792934245278977 0.04374048706240487 0.5632386585646815 ['ENSG00000198799|ENST00000361127|LRIG2'] 59655 16940 LGAEVALGAV True PC9_epitope_Rep5 898.5123823471798 898.51128993586 70.175 2 -0.1792982516890867 0.04374048706240487 0.5632525522985683 ['ENST00000264203.7_1_1:19665365-19665608:-|nuORF'] 140394 7429 YRESQKHRKEK True NCI_RA007_Epitope_Rep2 1487.7957082493897 1487.79406490379 33.524 3 -0.17930820783602894 0.04374048706240487 0.5632812068534275 ['nc|ENSG00000118096|Q9NQC8-2|IFT46'] 56104 7108 LATVTVRP True NCI_RA007_Epitope_Rep5 855.5178020807899 855.51670993586 34.021 2 -0.17934036728168729 0.04375868039040353 0.563373749138838 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 1544 9762 AEEPWGEEA True H1975_Epitope_Rep1 1016.4087051242799 1016.40760993586 42.479 2 -0.17936332472991842 0.04377520736625828 0.5634397975983739 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 20997 8337 EQRLIPGAP True H1975_Epitope_Rep2 979.5450794577897 979.5439899358599 37.02 2 -0.17937973215464403 0.04377520736625828 0.5634869944825377 ['BRF1|p.L343Pfs*104|1|0.45|ENSG00000185024|chr14:105226091-105226092|-/A|frameshift_variant'] 122296 8763 VGAVSELRCK True NCI_RA007_Epitope_Rep2 1060.56991430664 1060.5688099358601 38.732 2 -0.17940315078638142 0.04377520736625828 0.5635543491101348 ['ENST00000546516.5_1_16:705169-713132:+|nuORF', 'WDR90|p.S1458Vfs*13|1|0.09|ENSG00000161996|chr16:665739-665739|A/-|frameshift_variant', 'ENSG00000161996|ENST00000293879|WDR90', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'ENST00000547407.5_1_16:711076-715728:+|nuORF', 'ENST00000549024.5_1_16:711101-717586:+|nuORF', 'ENST00000548603.1_1_16:712278-713180:+|nuORF'] 62125 9692 LLEGEEERLR True PC9_epitope_Rep5 1242.6568147347398 1242.65515490379 42.248 3 -0.17952575410988825 0.04382977913900356 0.5639067704490859 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 48883 6256 KEAPSPFQA True H1975_Epitope_Rep3 973.4868958753299 973.4863449679301 29.075 1 -0.17956128673740976 0.04382977913900356 0.5640088456895086 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 16603 15640 EENVPIGTLVY True H1975_Epitope_Rep2 1232.6288686514 1232.6277699358602 65.315 2 -0.179605738109212 0.04382977913900356 0.5641365022169403 ['ENSG00000197410|ENST00000357232|DCHS2', 'DCHS2|p.E1385Kfs*12|1|0.17|ENSG00000197410|chr4:154304756-154304756|C/-|frameshift_variant', 'DCHS2|p.T1131Kfs*2|1|0.22|ENSG00000197410|chr4:154320642-154320642|G/-|frameshift_variant'] 111721 15135 TIGLIHAV True PC9_epitope_Rep5 822.4963383602201 822.49524993586 63.222 2 -0.17973110053909302 0.04386281931790082 0.5644962827054615 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 88937 21274 QVGEVMPFI True PC9_epitope_Rep4 1018.5157534754599 1018.51464993586 89.998 2 -0.17977208980219736 0.04386281931790082 0.5646138422608297 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 79141 12041 PALQSQSPV True PC9_epitope_Rep3 925.4868958753299 925.48578993586 51.352 2 -0.17977689650919781 0.04386281931790082 0.5646276257005667 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 15450 4705 EALHVITN True NCI_RA007_Epitope_Rep1 895.47633119163 895.4752299358599 22.383 2 -0.17977999055448673 0.04386281931790082 0.5646364977344038 ['ENSG00000147912|ENST00000432825|FBXO10', 'nc|ENSG00000147912|Q9UK96-2|FBXO10', 'ENST00000541804.1_1_9:37512546-37588833:-|nuORF', 'ENST00000276960.7_1_9:37515899-37521812:-|nuORF'] 11718 12119 DHARTITVAL True PC9_epitope_Rep1 1095.60365696307 1095.60254993586 51.478 2 -0.17982439676162904 0.04386281931790082 0.5647638068116978 ['nc|ENSG00000090861|P49588-2|AARS1', 'ENSG00000090861|ENST00000261772|AARS1'] 29549 6647 FVIATSTK True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 32.19 2 -0.1798962793394445 0.04386281931790082 0.5649697944766131 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 95347 19244 RVTFLVVAI True PC9_epitope_Rep6 1016.6382515666398 1016.63714993586 86.672 2 -0.17997411599160376 0.04388017118402283 0.5651927130083072 ['nc|ENSG00000288611|P48145|NPBWR1'] 5609 11844 ANLSEQQI True PC9_epitope_Rep3 901.4505103666099 901.44940993586 50.577 2 -0.17998437047266697 0.04388017118402283 0.5652220709174143 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF', 'EIF4G1|p.S1475C|1|0.16|ENSG00000114867|chr3:184331756-184331756|C/G|missense_variant'] 67285 6115 LSRSPGLAV True PC9_epitope_Rep2 898.5236157372199 898.52250993586 28.914 2 -0.17999015137455412 0.043892512789304526 0.56523862021621 ['ENST00000510733.1_1_4:155665168-155665375:+|nuORF'] 11133 13892 DDEYDYLFK True H1975_Epitope_Rep1 1206.5080848123796 1206.50698993586 58.585 2 -0.18006145089827863 0.043892512789304526 0.5654426711772218 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B', 'ENST00000598706.1_1_19:8455252-8465174:+|nuORF', 'ENST00000601897.1_1_19:8455300-8467022:+|nuORF'] 109229 8699 TARKQEII True H1975_Epitope_Rep2 957.5607295219298 957.55962993586 38.422 2 -0.18009355505531646 0.043892512789304526 0.5655345120572567 ['ENST00000466584.5_1_7:44259663-44260543:-|nuORF'] 64690 19082 LPVRLPLA True PC9_epitope_Rep3 877.5749230340899 877.57382993586 78.623 2 -0.18013176736968392 0.043892512789304526 0.5656437962670631 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 121903 16918 VFRHNLEI True PC9_epitope_Rep5 1026.5610638751 1026.5599699358602 70.092 2 -0.18014583229640072 0.043892512789304526 0.5656840125332099 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 130967 24967 VTDLITVGL True PC9_epitope_Rep1 929.54334812229 929.54224993586 100.95 2 -0.1801487789680956 0.043892512789304526 0.5656924374726269 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3'] 99612 9942 SIFFTRRWELW True H1975_Epitope_Rep1 1539.7986683715098 1539.79702490379 43.178 3 -0.18015776116561405 0.043892512789304526 0.5657181175973975 ['ENST00000587971.5_1_18:31684099-31802142:-|nuORF'] 133845 10611 VYGKVDSF True PC9_epitope_Rep1 913.4545331178899 913.45342993586 45.707 2 -0.18017059282133255 0.043892512789304526 0.5657548001643314 ['ENSG00000152127|ENST00000281923|MGAT5'] 24038 17386 EYNNIQHLF True PC9_epitope_Rep4 1176.5563724174801 1176.55526993586 74.877 2 -0.18020758742048626 0.04390819023713085 0.5658605378070574 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 45867 10988 ISDRPSLSV True PC9_epitope_Rep4 972.52400966004 972.52290993586 50.041 2 -0.18021655053000657 0.04390819023713085 0.5658861514227166 ['nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 3179 9293 AGEDCGEEVP True PC9_epitope_Rep2 1004.3756907438399 1004.37458993586 41.086 2 -0.18021903364781233 0.04390819023713085 0.5658932470336948 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 62407 19522 LLGTIIQL True PC9_epitope_Rep6 869.55860426361 869.55750993586 87.754 2 -0.18023497174525702 0.04390819023713085 0.5659387874732459 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'ENST00000488988.5_1_3:52422617-52433783:+|nuORF', 'ENST00000486752.5_1_3:52422617-52434459:+|nuORF'] 114538 16323 TQAPPNVVL True PC9_epitope_Rep1 937.5232813840499 937.52218993586 67.605 2 -0.1802457043270756 0.04392637103521716 0.5659694507803 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 133461 18254 VVYQDGFYGA True PC9_epitope_Rep3 1117.50802524273 1117.5069299358602 75.424 2 -0.18032026544005883 0.0439618946207526 0.5661824019661723 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 101752 14835 SLNLYENQV True PC9_epitope_Rep5 1078.5294889633 1078.52838993586 62.065 2 -0.1803577315912261 0.0439618946207526 0.5662893599765808 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 114686 5091 TQGPVHETV True PC9_epitope_Rep5 966.47705946762 966.47596993586 24.608 2 -0.18037861466851157 0.0439618946207526 0.5663489629395299 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK', 'PTPRK|p.Y967*|1|0.09|ENSG00000152894|chr6:127991374-127991375|CT/-|frameshift_variant'] 92457 19454 RLRRQERERKF True NCI_RA007_Epitope_Rep5 1572.9073243870396 1572.9062299358602 81.717 2 -0.18045619681925842 0.04397923678056015 0.5665703053940744 ['ENSG00000159450|ENST00000614923|TCHH'] 101891 8451 SLPRWVRRFWP True H1975_Epitope_Rep1 1498.8309715592998 1498.82932490379 37.435 3 -0.18048789050353595 0.04397923678056015 0.5666606882850792 ['ENST00000272438.8_1_2:71215398-71215467:-|nuORF'] 32482 17327 GGDDSFNTF True PC9_epitope_Rep3 958.3668403123 958.36574993586 71.822 2 -0.18053661468763985 0.0439965776214469 0.5667995934803088 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 26144 17738 FGYPFRLNEA True PC9_epitope_Rep6 1212.5927579262 1212.5916699358602 80.863 2 -0.18053848436419573 0.0439965776214469 0.5668049225635582 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 41560 20603 HYTIVFNTF True PC9_epitope_Rep1 1140.56039516876 1140.55928993586 84.066 2 -0.18057557352805909 0.044013080345260275 0.5669106202141172 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'nc|ENSG00000070961|P20020-5|ATP2B1', 'nc|ENSG00000070961|P20020-2|ATP2B1', 'nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 48114 13562 IYNQVKQII True PC9_epitope_Rep4 1117.64954452633 1117.64844993586 60.061 2 -0.18058746840003576 0.044013080345260275 0.5669445118755324 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 112404 12914 TLCGDLVLG True H1975_Epitope_Rep1 889.45790424617 889.4573549679301 54.747 1 -0.18061781277705133 0.044013080345260275 0.5670309564593612 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 73405 4354 [Acetylation]-M[Oxidation]TM[Oxidation]DKSELVQK True H1975_Epitope_Rep3 1382.64215391756 1382.64104993586 21.865 2 -0.18065908127572486 0.04403125534705983 0.5671484877428749 ['ENSG00000166913|ENST00000353703|YWHAB'] 38658 8692 HFQKSYTL True PC9_epitope_Rep5 1022.5185303567799 1022.5174299358599 38.375 2 -0.18069535108089457 0.04404859223208684 0.5672517507619761 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 56826 7392 LDNPERWNKVK True H1975_Epitope_Rep1 1397.74154741821 1397.7399149037901 33.437 3 -0.18074887937038137 0.04404859223208684 0.5674040950511067 ['ENSG00000179918|ENST00000478753|SEPHS2'] 120462 16520 VEERNLLSV True PC9_epitope_Rep6 1057.57677350889 1057.57566993586 75.981 2 -0.1807739035839517 0.04406592779879474 0.5674752927488874 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 78086 10793 NVVNRLTSV True PC9_epitope_Rep6 1000.56654317836 1000.56544993586 52.354 2 -0.1807758196701289 0.04406592779879474 0.5674807437143073 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 30551 7229 GAGTRLADAL True PC9_epitope_Rep4 943.5086939490698 943.50758993586 35.111 2 -0.18084159436584865 0.044083262047333906 0.567667811384233 ['ENST00000302538.9_1_17:907871-908078:-|nuORF'] 19070 18748 ELGASLVTV True PC9_epitope_Rep1 887.49639792987 887.4958449679301 76.902 1 -0.18090851609764427 0.044083262047333906 0.5678580393913938 ['ENST00000432031.6_1_2:179315212-179315317:-|nuORF'] 63779 15022 LNETEVGLY True H1975_Epitope_Rep1 1036.5076908895599 1036.5065899358601 63.03 2 -0.18095875282689888 0.044158461012051856 0.5680007719081119 ['MYH3|p.V606E|1|0.05|ENSG00000109063|chr17:10642488-10642488|A/T|missense_variant'] 21870 12195 ESDFDDEAYY True H1975_Epitope_Rep3 1252.4407930982 1252.43968993586 52.079 2 -0.1809803528294053 0.04419563936358279 0.568062123956207 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 107712 6499 SVSDGIHSV True PC9_epitope_Rep4 899.4348603024702 899.43376993586 32.119 2 -0.1810672575811774 0.04421380778588808 0.5683088572420674 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 131567 16263 VTLGKEDLSIK True PC9_epitope_Rep3 1201.69180326113 1201.69070993586 67.693 2 -0.18109074382289156 0.044231975517497 0.5683755076977305 ['ENSG00000067992|ENST00000379162|PDK3', 'nc|ENSG00000067992|Q15120-2|PDK3'] 124120 13479 VGSPYWMAP True PC9_epitope_Rep2 1006.4582385993399 1006.45714993586 57.132 2 -0.18125227080958334 0.04432533120450096 0.5688335522478642 ['ENSG00000107140|ENST00000336395|TESK1'] 98444 17044 SFFLSCSLCL True NCI_RA007_Epitope_Rep3 1118.5140392233 1118.5129499358602 74.905 2 -0.18125474529836433 0.04432533120450096 0.5688405645031398 ['ENST00000581424.1_1_17:61228485-61228857:+|nuORF'] 93809 16201 RRAQQETQQVP True PC9_epitope_Rep1 1339.69565985495 1339.69456993586 67.135 2 -0.18135873827381316 0.04434349578043032 0.5691351336599156 ['ENST00000440760.5_1_2:27594325-27599583:+|nuORF', 'nc|ENSG00000115234|Q15036-2|SNX17', 'ENSG00000115234|ENST00000233575|SNX17', 'ENST00000494893.5_1_2:27594167-27597059:+|nuORF'] 58048 7871 LEIIAFHCKSP True NCI_RA007_Epitope_Rep2 1256.6587293110401 1256.65762993586 35.248 2 -0.18139052064835612 0.04436081651271525 0.5692251099933031 ['ENSG00000187688|ENST00000338560|TRPV2'] 23449 11640 EVTINPDTT True PC9_epitope_Rep4 988.47130538084 988.47020993586 52.53 2 -0.18145165486439194 0.04436081651271525 0.5693981158728444 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'ENSG00000243480|ENST00000414303|AMY2A', 'CON__Q3MHH8'] 103562 6958 SPSLGSLMY True H1975_Epitope_Rep3 953.45281886573 953.45172993586 31.725 2 -0.1814991093355962 0.04437813592823476 0.5695323491079847 ['OR4A16|p.G49C|1|0.16|ENSG00000181961|chr11:55343345-55343345|G/T|missense_variant', 'ENSG00000181961|ENST00000314721|OR4A16'] 136942 11121 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.38026993586 47.662 2 -0.18151055886830758 0.04437813592823476 0.5695647282655866 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 107166 18417 SVIGSLNGV True PC9_epitope_Rep1 844.46543215476 844.4648849679301 75.631 1 -0.18155237865696527 0.044392079358443234 0.5696829682745913 ['ENST00000531017.5_1_19:50314409-50316363:-|nuORF', 'nc|ENSG00000010361|Q9BT04-3|FUZ', 'nc|ENSG00000010361|Q9BT04-2|FUZ', 'ENSG00000010361|ENST00000313777|FUZ'] 109618 4816 TEAGAGAVAAA True H1975_Epitope_Rep1 887.4348603024698 887.43431496793 23.6 1 -0.18156980215056445 0.044392079358443234 0.5697322189229138 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 124756 13305 VHCKTFSSI True PC9_epitope_Rep5 1020.50625142092 1020.50514993586 56.19 2 -0.18157793993747887 0.044392079358443234 0.569755219424212 ['MER20_dup10570|chr11:77042712-77042911:-|1.5771589287899446|0.4794554752219361|1.72|516.0|7|1|anti-sense'] 97329 3518 SEAPPTNQA True H1975_Epitope_Rep2 913.41412485789 913.41302993586 18.385 2 -0.181582549786457 0.044392079358443234 0.5697682479379864 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF', 'MAGED1|p.A206*|1|0.15|ENSG00000179222|chrX:51895601-51895602|-/AATGTAAATCAGGCCAA|frameshift_variant'] 22734 7526 ETTDGTLVT True H1975_Epitope_Rep3 935.44475627983 935.44364993586 33.93 2 -0.18169144872969084 0.044392079358443234 0.570075877827588 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 125836 17253 VLADVIDN True PC9_epitope_Rep1 857.44944773745 857.4488949679301 71.181 1 -0.18169587424885533 0.044392079358443234 0.5700883736790574 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 27843 9423 FQDGTKATF True PC9_epitope_Rep3 1013.4818104948899 1013.48070993586 41.181 2 -0.18185003427908195 0.044447400425661296 0.5705233727725548 ['ENSG00000110711|ENST00000279146|AIP'] 105156 13212 SRFPEALRL True PC9_epitope_Rep6 1087.61382772395 1087.6127299358602 62.469 2 -0.18188178842493344 0.044447400425661296 0.5706129055711016 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 121608 15849 VFFVCFAP True PC9_epitope_Rep1 928.4516966669198 928.45058993586 65.776 2 -0.18189711099374445 0.044465558194774345 0.5706561000625474 ['nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'ENSG00000181631|ENST00000325602|P2RY13'] 5269 19469 ALPTVLVGV True PC9_epitope_Rep6 867.5429541994698 867.54184993586 87.551 2 -0.1819853229279861 0.04452002736186061 0.5709046634175201 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 82299 2611 PPHPPPPPP True NCI_RA007_Epitope_Rep3 931.49158733295 931.49048993586 14.737 2 -0.18200314534489173 0.04452002736186061 0.5709548612052625 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 15387 13770 EAIEAILA True H1975_Epitope_Rep2 828.4592841451599 828.45818993586 58.112 2 -0.1820968502542194 0.04452002736186061 0.5712186633116323 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 119544 7958 VASQAPQSL True H1975_Epitope_Rep2 899.4712458111899 899.47014993586 35.558 2 -0.1822493059307569 0.04459094881635445 0.5716474214978213 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS'] 12669 12604 DLDNDLMKY True H1975_Epitope_Rep2 1125.50122561013 1125.50012993586 53.578 2 -0.18225111855117232 0.04459094881635445 0.5716525159186767 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000554026.5_1_14:76548780-76549917:+|nuORF'] 66941 7611 LSPACPAPK True NCI_RA007_Epitope_Rep1 882.46332397978 882.46222993586 33.597 2 -0.18228772337140428 0.04459094881635445 0.5717553782044427 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2', 'ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 14382 8416 DTDAQQAFKY True H1975_Epitope_Rep2 1185.5302172392899 1185.52912993586 37.327 2 -0.18232693187379784 0.04459094881635445 0.5718655219364104 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 106589 8663 STPEAPYASL True PC9_epitope_Rep1 1034.4920408254197 1034.49094993586 38.161 2 -0.18237380165086015 0.04459094881635445 0.5719971398950633 ['nc|ENSG00000143365|P51449-2|RORC', 'ENSG00000143365|ENST00000318247|RORC'] 99252 9881 SHPLLPGA True PC9_epitope_Rep3 790.43373810366 790.43264993586 42.965 2 -0.1823899296356271 0.04459094881635445 0.5720424178867339 ['ENST00000589764.1_1_18:12067489-12068164:-|nuORF'] 78358 12981 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 55.22 3 -0.18245349424696802 0.04460825290675583 0.5722208103655203 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 101911 17711 SLPTAPLAP True PC9_epitope_Rep5 865.49091862661 865.48982993586 73.142 2 -0.18245929410928727 0.04460825290675583 0.5722370827696615 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 122754 14787 VGGLGVAVV True PC9_epitope_Rep6 769.46978925921 769.4692449679301 68.844 1 -0.18250893500289248 0.044624707916183816 0.572376325308184 ['nc|ENSG00000157593|Q8TB61-5|SLC35B2', 'nc|ENSG00000157593|Q8TB61-4|SLC35B2', 'nc|ENSG00000157593|Q8TB61-3|SLC35B2', 'nc|ENSG00000157593|Q8TB61-2|SLC35B2', 'ENSG00000157593|ENST00000393812|SLC35B2'] 56734 5921 LDLGSGVK True NCI_RA007_Epitope_Rep5 787.44396843419 787.44286993586 29.462 2 -0.18251290065825648 0.044624707916183816 0.5723874464382196 ['ENST00000494039.1_X:52241120-52243863:+|nuORF', 'ENSG00000204382|ENST00000375616|XAGE1B', 'ENSG00000204379|ENST00000375602|XAGE1A', 'chrX:52515573-52520709|381|19.18|0.09|7.67|-|ENST00000518075|XAGE1B,XAGE1B'] 107594 17993 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 74.002 2 -0.18253580649260173 0.044624707916183816 0.5724516753718699 ['ENSG00000115919|ENST00000264170|KYNU'] 28810 12134 FSVSSTLTDHK True H1975_Epitope_Rep3 1220.60371653272 1220.60260993586 51.842 2 -0.1825524652239184 0.044642857142857144 0.5724983793444967 ['ENSG00000185177|ENST00000319636|ZNF479'] 75948 14644 NLSTAVPSL True PC9_epitope_Rep4 900.4916469026 900.49109496793 64.257 1 -0.18264958169608753 0.04467915352760154 0.5727705212956461 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 65858 16193 LSDLNDELLLK True H1975_Epitope_Rep3 1271.69728256439 1271.69618993586 67.743 2 -0.18265344416376156 0.04467915352760154 0.572781340154804 ['ENSG00000137628|ENST00000393743|DDX60'] 48113 15346 IYNQVKQII True PC9_epitope_Rep3 1117.64954452633 1117.64844993586 64.184 2 -0.1826981641908702 0.04471459777756672 0.5729065761222228 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 113682 20310 TLWVWALAP True PC9_epitope_Rep4 1055.5804023373498 1055.57930993586 86.265 2 -0.18275304313404872 0.04471459777756672 0.5730601965265311 ['nc|ENSG00000284730|P0DPE3|TMDD1'] 83324 9356 PTEDELSLP True H1975_Epitope_Rep2 999.4760564081099 999.47547496793 40.949 1 -0.182836088514523 0.04471459777756672 0.5732925256323378 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 65094 5404 LQLSPHQIQA True NCI_RA007_Epitope_Rep3 1133.6193070272102 1133.61820993586 28.267 2 -0.18296532321807327 0.044750037988147695 0.5736537473280289 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 78540 11004 NYPSAFHSV True PC9_epitope_Rep2 1020.46649478392 1020.46538993586 47.648 2 -0.18301315396997664 0.044750037988147695 0.5737873369975733 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 83997 15102 PVSRSVLTL True PC9_epitope_Rep2 970.58113061334 970.58002993586 63.347 2 -0.18301802410669757 0.044750037988147695 0.5738009360527441 ['FCRL5|p.P752S|1|0.17|ENSG00000143297|chr1:157521278-157521278|G/A|missense_variant'] 87113 16172 QNSMATVEL True PC9_epitope_Rep5 991.4644461785899 991.46334993586 67.195 2 -0.18304722531378134 0.0447673314339981 0.5738824637037055 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'nc|ENSG00000144406|Q8N2C7-3|UNC80', 'ENST00000478701.1_1_2:210636760-210659540:+|nuORF'] 107327 22121 SVLETSPDILL True PC9_epitope_Rep5 1185.64926974281 1185.64816993586 90.124 2 -0.18307340045645054 0.0447673314339981 0.5739555254395912 ['ENSG00000119514|ENST00000375011|GALNT12'] 33016 6706 GIGTVPVGR True NCI_RA007_Epitope_Rep2 854.4974009893798 854.49630993586 30.697 2 -0.18316963546453927 0.044801063526730606 0.5742240015174267 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 101909 17823 SLPTAPLAP True PC9_epitope_Rep3 865.49091862661 865.48982993586 73.754 2 -0.18317063299450284 0.044801063526730606 0.5742267832590655 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 47525 10245 IVSEKSRYSL True PC9_epitope_Rep4 1180.6451874218799 1180.6440899358602 47.088 2 -0.18317581075398606 0.044801063526730606 0.5742412217287929 ['ENSG00000163686|ENST00000478253|ABHD6'] 31892 18945 GELPSWIL True H1975_Epitope_Rep2 913.49091862661 913.49037496793 78.642 1 -0.1831886027374301 0.044801063526730606 0.574276890124299 ['nc|ENSG00000241468|P56134-2|ATP5MF', 'ENSG00000241468|ENST00000292475|ATP5MF', 'ENST00000491560.1_1_7:99055952-99057898:-|nuORF', 'ENST00000481899.1_1_7:99056719-99057898:-|nuORF', 'nc|ENSG00000241468|P56134-4|ATP5MF', 'ENST00000485011.1_1_7:99057682-99063764:-|nuORF', 'nc|ENSG00000241468|P56134-3|ATP5MF', 'ENST00000524321.1_1_7:99057682-99063764:-|nuORF'] 137057 11061 YANQSGVI True PC9_epitope_Rep4 850.4184819623399 850.41738993586 50.323 2 -0.18321314529735722 0.044801063526730606 0.5743453121127305 ['nc|ENSG807|P61550|ERVS71-1'] 48765 6053 KDKNYTSI True NCI_RA007_Epitope_Rep4 967.49746055903 967.49636993586 29.899 2 -0.18334264288494512 0.04487191659862137 0.5747060974467445 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 137441 6148 YEDGGKPPVP True H1975_Epitope_Rep3 1057.50802524273 1057.5069299358602 28.659 2 -0.18338481588670566 0.04487191659862137 0.574823505914336 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 104968 14736 SRDGQYLL True PC9_epitope_Rep5 950.48214484806 950.48159496793 61.681 1 -0.1833882492694778 0.04487191659862137 0.5748330624695772 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'ENST00000503716.5_1_4:151186876-151502511:-|nuORF', 'ENST00000515096.5_1_4:151186876-151231561:-|nuORF'] 37682 6492 GVYGSFASK True NCI_RA007_Epitope_Rep4 914.4497820906199 914.44868993586 31.571 2 -0.18339369707413816 0.04487191659862137 0.5748482254289385 ['ENSG00000155096|ENST00000337198|AZIN1'] 142683 14916 YYPSTPGRYSI True PC9_epitope_Rep5 1302.6244519773 1302.6228149037902 62.379 3 -0.1834362143483275 0.04487191659862137 0.5749665398242993 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 5895 6949 APGKGILAA True PC9_epitope_Rep2 796.4806882960798 796.47958993586 32.128 2 -0.18347335829519398 0.04487191659862137 0.5750698659587327 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 9230 9569 AVNSATGVPTV True NCI_RA007_Epitope_Rep1 1014.5345743437399 1014.53346993586 41.22 2 -0.1835136940040749 0.04489005354904865 0.5751820331214588 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 113100 16156 TLNTTYSFLT True PC9_epitope_Rep2 1159.57610480255 1159.5750099358602 67.398 2 -0.18359993306454725 0.04496430198997418 0.5754217182253473 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000504459.5_1_5:74009375-74016573:+|nuORF'] 30060 16727 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6166049037902 72.308 3 -0.18362373516607264 0.04496430198997418 0.5754878399597689 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 114383 13808 TPSPIISP True PC9_epitope_Rep6 810.4487194614601 810.4481749679301 64.916 1 -0.18362964414745836 0.044980727970076136 0.5755042528593577 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 78624 7342 NYTARFSRF True NCI_RA007_Epitope_Rep3 1160.57269118796 1160.5710449037902 36.004 3 -0.18363822899790935 0.044980727970076136 0.5755280967970826 ['ENSG00000144231|ENST00000272645|POLR2D'] 9541 17193 AVYGPELYAA True PC9_epitope_Rep6 1052.51786165044 1052.51676993586 78.721 2 -0.18364621093932534 0.044980727970076136 0.5755502645872985 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000100320|O43251-4|RBFOX2', 'nc|ENSG00000100320|O43251-9|RBFOX2'] 55154 16148 LAAHIPLFL True H1975_Epitope_Rep2 993.60113778193 993.6000499358599 67.325 2 -0.18367607670592487 0.04499629777296805 0.5756331953807831 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9'] 13084 5841 DLQEPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43324496793 27.458 1 -0.18368006471658854 0.04499629777296805 0.5756442675903192 ['ENSG00000142530|ENST00000600100|GARIN5A', 'nc|ENSG00000142530|Q6IPT2-2|GARIN5A'] 15614 6347 EASADVMLSP True H1975_Epitope_Rep2 1018.46411182542 1018.46300993586 29.343 2 -0.18368216500629467 0.04499629777296805 0.5756500986252883 ['ENST00000496594.5_1_9:130883426-130884979:-|nuORF'] 35595 16272 GTASGFYTV True PC9_epitope_Rep1 901.4181476091701 901.4175949679301 67.409 1 -0.18370064362442617 0.04499629777296805 0.5757013962091636 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 59480 21384 LFQPLVAV True PC9_epitope_Rep2 885.5323895157699 885.53128993586 87.725 2 -0.18374808529308123 0.045012719747883206 0.5758330587752206 ['FUT3|p.L24P|1|0.17|ENSG00000171124|chr19:5844769-5844769|A/G|missense_variant'] 113396 15889 TLSCSVTGV True PC9_epitope_Rep5 865.42151873745 865.4204299358599 66.107 2 -0.18375027603827804 0.045012719747883206 0.5758391373255402 ['ENST00000540139.5_3_11:61120480-61121493:-|nuORF'] 1252 14899 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 62.463 1 -0.18375678162067238 0.045012719747883206 0.5758571873509034 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 14710 14675 DVLKFLAA True H1975_Epitope_Rep2 875.5116540711899 875.51054993586 61.608 2 -0.18377029540692433 0.04502999468448629 0.5758946786647435 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 70672 24111 LWHIWRERN True PC9_epitope_Rep6 1308.68397297244 1308.68233490379 106.34 3 -0.183778997926688 0.04502999468448629 0.5759188197300722 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 18341 13140 EITAALSP True PC9_epitope_Rep1 800.42798401688 800.42743496793 55.411 1 -0.1837959895902604 0.04504812346944587 0.5759659498442989 ['ENSG00000111012|ENST00000228606|CYP27B1'] 108992 7186 TAGREARQVFR True NCI_RA007_Epitope_Rep5 1289.6952659321298 1289.6936249037901 34.32 3 -0.18382477984770523 0.04506197445096141 0.5760457899524186 ['ENST00000559239.1_1_15:65112173-65113270:-|nuORF'] 80374 9315 PGHLQEGF True PC9_epitope_Rep3 883.41881631551 883.41770993586 40.77 2 -0.18382979091125876 0.04506197445096141 0.5760596843973914 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 29780 11406 FVPEKNFRV True PC9_epitope_Rep5 1134.61857875122 1134.61693490379 48.87 3 -0.18383159067681837 0.04506197445096141 0.5760646745551414 ['THRAP3|p.T757Rfs*5|1|0.18|ENSG00000054118|chr1:36296736-36296737|AC/-|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 83534 5413 PTTSGPSTPP True H1975_Epitope_Rep2 940.45017601344 940.44906993586 25.849 2 -0.18387374052594263 0.04506197445096141 0.576181519719092 ['ENSG00000065526|ENST00000375759|SPEN'] 70145 13766 LVPPDQPEV True PC9_epitope_Rep4 992.51786165044 992.51676993586 60.845 2 -0.18387915523211756 0.04506197445096141 0.576196526898612 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 10913 7073 DAALGVRAEP True NCI_RA007_Epitope_Rep1 997.51925863277 997.51816993586 31.506 2 -0.18389142660136323 0.04506197445096141 0.576230535089505 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA', 'ENST00000567284.6_1_16:89836854-89845216:-|nuORF'] 2822 7499 AEVDAAMAA True H1975_Epitope_Rep3 847.3745685450299 847.37346993586 33.826 2 -0.18393943032184865 0.0450801002201807 0.5763635347640331 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 62231 11841 LLEYCMVT True PC9_epitope_Rep1 970.4503763375799 970.44926993586 50.411 2 -0.1841557094994476 0.04517329081729492 0.5769620648357183 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 8241 8382 ATGIILPAR True NCI_RA007_Epitope_Rep4 910.5600012459399 910.55890993586 39.055 2 -0.1842144695324521 0.04517329081729492 0.5771244801638455 ['ENSG00000163909|ENST00000372852|HEYL'] 42453 6780 IEDYMREWRTK True H1975_Epitope_Rep1 1525.73474778561 1525.73311490379 31.123 3 -0.18428309218384573 0.04520867733302966 0.577314049532321 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9'] 6559 13676 APVAAPVAA True PC9_epitope_Rep2 765.43848913093 765.4379449679301 57.895 1 -0.18429397831187508 0.04520867733302966 0.5773441117804453 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 62861 21683 LLMPAILLL True PC9_epitope_Rep5 995.6453110930299 995.64420993586 88.451 2 -0.18431132870061143 0.04520867733302966 0.5773920192221405 ['ENST00000471365.1_1_10:38658087-38667032:+|nuORF', 'nc|ENSG00000132196|P56937-2|HSD17B7', 'ENSG00000132196|ENST00000254521|HSD17B7'] 24656 18227 FALASHLIEA True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 78.181 2 -0.18434971025394256 0.04522422333137229 0.5774979712312968 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 31490 5245 GEASPPAPP True NCI_RA007_Epitope_Rep4 821.3919328613299 821.39082993586 26.715 2 -0.18437931862783527 0.04522422333137229 0.5775796803342179 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 112538 22680 TLEDIEIIQ True PC9_epitope_Rep3 1072.5652057656798 1072.5641099358602 92.511 2 -0.18438721238762196 0.04522422333137229 0.5776014608232011 ['ENST00000456360.5_1_Y:23556925-23559248:-|nuORF'] 73072 9769 MRDPTLYRC True PC9_epitope_Rep1 1153.5372342793698 1153.53559490379 42.437 3 -0.1843915926666403 0.04522422333137229 0.5776135462465607 ['ENSG00000136628|ENST00000366923|EPRS1'] 33353 11294 GKTTISFAL True NCI_RA007_Epitope_Rep3 936.5280324113199 936.52692993586 51.535 2 -0.18445849524361493 0.045259602246849856 0.5777980756839041 ['ENSG00000198682|ENST00000456849|PAPSS2', 'nc|ENSG00000198682|O95340|PAPSS2', 'PAPSS2|p.G541Wfs*26|1|0.67|ENSG00000198682|chr10:87745140-87745141|-/C|frameshift_variant'] 120925 9436 VENVMEDICSK True H1975_Epitope_Rep1 1265.5631742436901 1265.56206993586 41.21 2 -0.1844643973376321 0.045259602246849856 0.5778143494710613 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 6097 23080 APLVTLEVL True PC9_epitope_Rep2 953.57973363101 953.57862993586 94.27 2 -0.1845630049964866 0.045259602246849856 0.5780861132238709 ['ENSG00000125872|ENST00000378858|LRRN4'] 53078 4225 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 22.626 2 -0.18470085771342667 0.045333788758586666 0.5784656372000537 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 16967 13219 EFVQQAQSL True PC9_epitope_Rep1 1048.5189242795998 1048.5178299358602 55.71 2 -0.18470197774986566 0.045333788758586666 0.5784687188759686 ['ENSG00000164244|ENST00000296666|PRRC1', 'nc|ENSG00000164244|Q96M27-3|PRRC1', 'nc|ENSG00000164244|Q96M27-2|PRRC1'] 16617 12888 EEPRTPRRRER True PC9_epitope_Rep5 1480.79710523172 1480.79545490379 54.584 3 -0.18482869157647072 0.04537001897533207 0.5788171611909648 ['ENST00000502027.1_1_15:57598736-57599752:+|nuORF'] 88070 20315 QRRERRFRRYL True NCI_RA007_Epitope_Rep2 1634.9342078412196 1634.93310993586 84.052 2 -0.18484279631943534 0.04537001897533207 0.5788559225169632 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 126882 15072 VLQLGNIVFK True NCI_RA007_Epitope_Rep2 1129.68593003505 1129.68482993586 63.312 2 -0.18485307562217515 0.04540710802451566 0.5788841680458631 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 94238 3372 RRQFAIQK True NCI_RA007_Epitope_Rep4 1045.6144964302896 1045.6133899358601 18.794 2 -0.18492663046092234 0.04542435914464072 0.5790862065993665 ['PARP4|p.K205Q|1|0.33|ENSG00000102699|chr13:24494701-24494701|T/G|missense_variant'] 79120 4969 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 25.718 2 -0.18492722440468048 0.04542435914464072 0.5790878374868887 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 85144 5820 QEMDSGTEY True H1975_Epitope_Rep2 1058.38625542754 1058.38514993586 27.378 2 -0.18496541888306592 0.0454778302692242 0.5791926960067417 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 46212 11457 ISNEFKVEV True PC9_epitope_Rep5 1063.5549754351498 1063.5538699358601 49.068 2 -0.1849801836579485 0.0454778302692242 0.5792332213570462 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 73703 6814 MYRRWWEQFVQ True NCI_RA007_Epitope_Rep5 1627.77180200067 1627.7701649037901 32.895 3 -0.18498980617467106 0.0454778302692242 0.5792596296958455 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 53260 7010 KQGWTPRRMFK True NCI_RA007_Epitope_Rep5 1433.7714080778494 1433.76976490379 33.643 3 -0.1850842777795656 0.0454778302692242 0.5795187793469694 ['ENSG00000159640|ENST00000290866|ACE', 'nc|ENSG00000159640|P12821-2|ACE', 'ENST00000579314.5_1_17:61565977-61574724:+|nuORF', 'ENST00000578839.5_1_17:61562212-61574724:+|nuORF', 'nc|ENSG00000159640|P12821-4|ACE', 'nc|ENSG00000159640|P12821-3|ACE'] 100681 10386 SLDLTTLVP True H1975_Epitope_Rep2 957.53826274185 957.53716993586 44.961 2 -0.18508876874811195 0.04549507674211235 0.5795310932608646 ['ENST00000570036.5_1_16:84513521-84531159:-|nuORF', 'ENSG00000140950|ENST00000343629|MEAK7'] 63979 13003 LNVLANVI True NCI_RA007_Epitope_Rep5 854.52255310806 854.52144993586 56.694 2 -0.18510159559720057 0.04549507674211235 0.5795662608214963 ['nc|ENSG00000197444|Q9ULD0-3|OGDHL', 'nc|ENSG00000197444|Q9ULD0-2|OGDHL', 'ENSG00000197444|ENST00000374103|OGDHL', 'OGDHL|p.R310L|1|0.39|ENSG00000197444|chr10:49749784-49749784|C/A|missense_variant', 'nc|ENSG00000105953|Q02218-2|OGDH', 'ENSG00000105953|ENST00000222673|OGDH', 'nc|ENSG00000105953|Q02218-3|OGDH', 'OGDH|p.H691Mfs*13|1|0.17|ENSG00000105953|chr7:44697388-44697388|C/-|frameshift_variant'] 22041 15213 ESLGTLYLL True NCI_RA007_Epitope_Rep3 1007.55391280599 1007.55280993586 67.361 2 -0.18514355028754542 0.04551059510936581 0.5796812602526845 ['ENST00000541346.1_1_12:6859683-6861527:-|nuORF', 'ENST00000564181.1_1_12:6859683-6859983:-|nuORF'] 53025 6672 KPKVIIVQA True PC9_epitope_Rep2 994.6539016307798 994.65280993586 31.07 2 -0.1851507669841963 0.04551059510936581 0.5797010371179624 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 120880 8503 VENAYYYCNP True H1975_Epitope_Rep1 1234.49647458286 1234.49536993586 37.637 2 -0.18517909492634238 0.04551059510936581 0.5797786554810261 ['ENSG00000151461|ENST00000357604|UPF2'] 78663 11665 NYVKKFQSF True PC9_epitope_Rep5 1159.6025943339098 1159.60093490379 49.865 3 -0.1851904698867957 0.04551059510936581 0.5798098172161205 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000278882.8_1_20:29623179-29633907:+|nuORF'] 139544 16719 YLTFYSTVAPV True PC9_epitope_Rep5 1259.64379043955 1259.64268993586 69.317 2 -0.18527121176141206 0.045547672345107565 0.5800309179109882 ['ENST00000417121.2_1_3:50255369-50255834:+|nuORF'] 59550 18526 LFSYSQIF True NCI_RA007_Epitope_Rep3 1003.5014833103099 1003.50038993586 81.066 2 -0.18529703774148717 0.04556577824148724 0.5801016048426926 ['ENSG00000127529|ENST00000248072|OR7C2'] 122460 21641 VGEEFQIVL True PC9_epitope_Rep2 1032.5491617787197 1032.5480699358602 88.716 2 -0.18532349826621095 0.04558388345094468 0.5801740114427149 ['nc|ENSG00000163297|P58335|ANTXR2', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335-3|ANTXR2'] 39582 14265 HLIGDFSKV True PC9_epitope_Rep1 1014.54983048506 1014.54872993586 59.694 2 -0.18537721713439542 0.04560025797150932 0.5803209545040534 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 73698 11071 MYQEHINEI True PC9_epitope_Rep4 1175.52810906431 1175.5270099358602 50.362 2 -0.1853930022972021 0.04560025797150932 0.5803641197966698 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 83600 17267 PVCPPGGIQEV True PC9_epitope_Rep3 1094.5430308524599 1094.54192993586 71.572 2 -0.18544433316314837 0.04560025797150932 0.5805044438745521 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 106761 6210 STYRDFQQA True PC9_epitope_Rep6 1114.50433684462 1114.5032299358602 32.349 2 -0.18557066627368637 0.04563732928679818 0.5808495247272247 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.S39G|1|0.41|ENSG00000125676|chrX:123712865-123712865|T/C|missense_variant'] 55927 16485 LARDSLAL True PC9_epitope_Rep3 857.4970666362099 857.49596993586 68.546 2 -0.185639412784003 0.04569163363238055 0.5810371405180624 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.A128S|1|0.29|ENSG00000137642|chr11:121470103-121470103|G/T|missense_variant'] 68589 5128 LTHHRGWWYK True NCI_RA007_Epitope_Rep4 1382.69962303658 1382.69797490379 26.241 3 -0.185671628128791 0.04569163363238055 0.5811250188843645 ['TNN|p.G1230R|1|0.13|ENSG00000120332|chr1:175144479-175144479|G/C|missense_variant'] 61740 15936 LLAESVTEV True PC9_epitope_Rep6 959.5175272972699 959.51642993586 73.593 2 -0.18567286980659434 0.04569163363238055 0.5811284054690252 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 62371 19819 LLGPPPVGV True PC9_epitope_Rep5 847.51673945163 847.51619496793 81.282 1 -0.18575608571199845 0.045727833096254146 0.5813552833715914 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 18276 16102 EIRATFLQT True PC9_epitope_Rep5 1077.5818588893299 1077.5807699358602 66.925 2 -0.18576223488601512 0.045727833096254146 0.5813720415044134 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-2|ZZEF1'] 945 4916 ADRLKLRPR True NCI_RA007_Epitope_Rep4 1123.6938093801498 1123.6921649037902 25.368 3 -0.18578435760552972 0.045744196631770595 0.5814323240131926 ['ENSG00000107863|ENST00000396432|ARHGAP21', 'ENST00000486374.5_1_10:24873343-24884978:-|nuORF'] 12070 9918 DHTSVGIL True PC9_epitope_Rep4 840.4341320264799 840.43302993586 45.802 2 -0.1857922087488079 0.045744196631770595 0.5814537147762932 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 35785 14001 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 61.762 2 -0.18581312625847293 0.045744196631770595 0.5815106979053731 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 79132 6455 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 29.804 2 -0.18586292188654818 0.04580022378577254 0.581646306495877 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 82926 13672 PSCSAAVAM True PC9_epitope_Rep5 835.35681030591 835.3562649679301 57.614 1 -0.1858853151502503 0.045814844312966965 0.5817072700145284 ['ENST00000427525.2_1_15:85175210-85177593:+|nuORF'] 119181 10351 VAKGGLGLI True PC9_epitope_Rep6 826.5276384884999 826.52654993586 50.532 2 -0.18590207014324056 0.045814844312966965 0.5817528757108974 ['ENSG00000101843|ENST00000217958|PSMD10'] 56961 14991 LDQTLLDLNEM-[Oxidation] True NCI_RA007_Epitope_Rep2 1319.6278830556698 1319.6267899358602 62.993 2 -0.18592108107050512 0.045814844312966965 0.5818046134020021 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 45375 5909 IQDSRTLP True NCI_RA007_Epitope_Rep1 928.4977949122 928.49668993586 27.036 2 -0.1859258745184124 0.045814844312966965 0.5818176572107217 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 1394 10500 AEEEAPWAA True H1975_Epitope_Rep3 972.4188758851598 972.4183249679301 45.451 1 -0.18598984677151198 0.045814844312966965 0.5819916820503407 ['ENSG00000100294|ENST00000290429|MCAT', 'nc|ENSG00000100294|Q8IVS2-2|MCAT'] 47906 12098 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6584049037901 54.339 3 -0.18603057870400252 0.045832938276287094 0.5821024326588551 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 100709 14399 SLDRQLTGL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 60.21 2 -0.18605528899015877 0.045845815479124793 0.5821696000457509 ['ENSG00000168434|ENST00000307149|COG7'] 8163 3460 ATEQPLTAK True NCI_RA007_Epitope_Rep5 957.5131106231698 957.51200993586 19.073 2 -0.18610265724383526 0.045845815479124793 0.5822983136015166 ['ENSG00000120725|ENST00000394817|SIL1'] 89566 12404 QYMKIISSF True NCI_RA007_Epitope_Rep3 1115.5685173243098 1115.56740993586 55.997 2 -0.18611843232572417 0.045845815479124793 0.5823411667278757 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 56243 12522 LCPMNFVPVP True H1975_Epitope_Rep2 1115.5507590851898 1115.54966993586 53.259 2 -0.18615308792148538 0.045845815479124793 0.5824352870794367 ['ENST00000478275.1_1_1:212860135-212870482:-|nuORF', 'ENSG00000123685|ENST00000243440|BATF3'] 93308 5541 RPRVTEPISA True PC9_epitope_Rep4 1124.6302060640799 1124.62855490379 28.077 3 -0.18619893803241805 0.045845815479124793 0.5825597642393564 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 126073 17136 VLEHLNAIV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 73.919 2 -0.18620024418857944 0.045845815479124793 0.5825633095156213 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.I755Sfs*38|1|0.15|ENSG00000121871|chr3:165188569-165188569|G/-|frameshift_variant'] 101081 11174 SLGGYSLSV True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 48.019 1 -0.18626573141411984 0.045845815479124793 0.5827410056201139 ['ENSG00000125508|ENST00000217188|SRMS', 'SRMS|p.A162D|1|0.24|ENSG00000125508|chr20:63543474-63543474|G/T|missense_variant', 'SRMS|p.S384Qfs*13|1|0.19|ENSG00000125508|chr20:63541326-63541327|-/G|frameshift_variant'] 101523 10247 SLLEQDLAT True H1975_Epitope_Rep2 988.5076908895599 988.50658993586 44.42 2 -0.18637461041011555 0.04588199605642348 0.583036205416951 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'ENST00000488203.1_1_12:120221699-120241095:-|nuORF'] 6262 12372 APRAALVFA True PC9_epitope_Rep6 914.5337864980999 914.53268993586 58.993 2 -0.18638020165714786 0.04588199605642348 0.5830513567538081 ['ENSG00000170006|ENST00000304385|TMEM154'] 33673 8890 GLGRPKRERR True NCI_RA007_Epitope_Rep5 1223.7323201471897 1223.73067490379 40.858 3 -0.1864285260460266 0.045899215106358776 0.5831822750534442 ['ENSG00000169551|ENST00000276241|CT55'] 12415 8352 DITSDTSGDFR True NCI_RA007_Epitope_Rep2 1212.5258601348398 1212.52527496793 37.129 1 -0.1864334343735826 0.045899215106358776 0.5831955692028682 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 103950 17475 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51289496793 72.22 1 -0.18647879963674963 0.04593539091529537 0.5833184119071925 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 98901 20555 SGYPGLLNGV True PC9_epitope_Rep3 975.5025459394699 975.50144993586 84.328 2 -0.18648823407888787 0.04593539091529537 0.5833439525557995 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 110979 5209 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 25.425 2 -0.1865343305713995 0.04597156398104266 0.5834687115305037 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 79110 5159 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 25.22 2 -0.18654485234204227 0.04597156398104266 0.5834971809569556 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 102051 10553 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 45.482 3 -0.18659153698431868 0.04602581843686615 0.5836234650450768 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 114254 6000 TPNEIKVSA True PC9_epitope_Rep6 957.51311062317 957.51200993586 31.402 2 -0.18659685454632707 0.04602581843686615 0.5836378458205714 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 130106 12974 VSDPNLIHV True PC9_epitope_Rep4 992.52909504048 992.52798993586 57.799 2 -0.18663894483689045 0.04602581843686615 0.5837516494257021 ['ENSG00000115760|ENST00000421745|BIRC6'] 116256 17328 TTDFIYQLY True H1975_Epitope_Rep3 1162.55464108198 1162.5540749679299 72.306 1 -0.18666965830392182 0.04604215634240655 0.5838346643105727 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 102355 8528 SLSVRTEFHPR True NCI_RA007_Epitope_Rep2 1327.69968260623 1327.69804490379 37.817 3 -0.18668060874228815 0.04604215634240655 0.5838642563211852 ['ENST00000424768.1_1_7:105926115-105926304:-|nuORF'] 117157 16479 TVLDIHDNQL True PC9_epitope_Rep1 1166.59315184902 1166.5920499358601 68.212 2 -0.1867056914231961 0.04604215634240655 0.5839320273543613 ['ENSG00000066557|ENST00000370952|LRRC40'] 80989 19876 PIIGSLFL True H1975_Epitope_Rep3 858.5214904789 858.5209449679301 83.209 1 -0.18677042497226748 0.04605761940864291 0.5841068581552368 ['ENSG00000108784|ENST00000225927|NAGLU'] 70503 15636 LVVTHTIAL True PC9_epitope_Rep4 965.5909670210499 965.58986993586 68.069 2 -0.18678891484300322 0.04605761940864291 0.5841567757869611 ['ENST00000533632.5_1_11:118889218-118889467:+|nuORF'] 85149 3877 QEMMSQIKYKK True NCI_RA007_Epitope_Rep2 1412.7155925641598 1412.71393490379 19.716 3 -0.18680248434027905 0.04605761940864291 0.5841934042698436 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 90345 8021 REFLWQEGHSA True NCI_RA007_Epitope_Rep3 1358.6367479965002 1358.63509490379 38.643 3 -0.1868054240567895 0.04605761940864291 0.5842013389090245 ['ENSG00000136628|ENST00000366923|EPRS1'] 128937 14435 VQIEHISSL True PC9_epitope_Rep5 1024.5553097883198 1024.5542099358602 60.524 2 -0.18684800715609137 0.04607569985405887 0.5843162512707631 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 86770 22427 QLLNWVYLSL True PC9_epitope_Rep5 1247.69140933831 1247.6903099358601 91.266 2 -0.1869072020259386 0.04609377961411622 0.5844759153260708 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 6259 15013 APRAALVFA True PC9_epitope_Rep3 914.5337864980999 914.53268993586 62.873 2 -0.18702868011632015 0.04616871671436423 0.5848032967958818 ['ENSG00000170006|ENST00000304385|TMEM154'] 26282 10638 FHGAPLTV True PC9_epitope_Rep6 840.4493881678001 840.44828993586 51.735 2 -0.18715494083673276 0.04618679402623001 0.5851431725175623 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 30697 14934 GALEPHINAQI True PC9_epitope_Rep5 1161.61422164677 1161.6131299358601 62.448 2 -0.1871721084409375 0.04620399499677823 0.585189354127326 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 57474 8376 LEDDARVI True PC9_epitope_Rep1 929.4818104948899 929.48070993586 37.054 2 -0.1871770326485177 0.04620399499677823 0.5852025990867036 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 106715 8444 [Acetylation]-STVHEILC[Carbamidomethyl]K True H1975_Epitope_Rep1 1127.56449516876 1127.5633899358602 37.408 2 -0.18722987475081634 0.04624102185077795 0.5853446932993144 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 83598 17298 PVCPPGGIQEV True PC9_epitope_Rep1 1094.5430308524599 1094.54192993586 71.353 2 -0.18734785099557708 0.04629524350956983 0.5856616803981258 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 134058 7863 VYKDHQTITI True PC9_epitope_Rep2 1216.6451874218799 1216.6440899358602 35.613 2 -0.18737830640462963 0.04629524350956983 0.5857434529378979 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 83056 22478 PSLLFGSEIF True PC9_epitope_Rep1 1108.580461907 1108.57936993586 91.264 2 -0.18740543170728258 0.04629524350956983 0.5858162643725551 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L'] 1565 5137 AEETEQMIEK True H1975_Epitope_Rep3 1206.5438186980998 1206.54272993586 24.863 2 -0.18743168222454556 0.04630892830074276 0.5858867098902312 ['ENSG00000171724|ENST00000302536|VAT1L'] 130459 16899 VSPASFENV True PC9_epitope_Rep5 948.45526139388 948.45471496793 70.015 1 -0.18743391210644733 0.04630892830074276 0.5858926931645289 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 54909 11445 KYPNVFKKI True PC9_epitope_Rep5 1135.67536535135 1135.67371490379 49.021 3 -0.18744924911553162 0.04630892830074276 0.5859338423898567 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 5615 7223 ANPEDC[Carbamidomethyl]VAFGK True H1975_Epitope_Rep1 1206.5339230001698 1206.53282993586 32.795 2 -0.18746738334939017 0.04630892830074276 0.5859824888757122 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant', 'ENSG00000008394|ENST00000396210|MGST1', 'nc|ENSG00000008394|P10620-2|MGST1', 'ENST00000539708.5_1_12:16507186-16513330:+|nuORF', 'ENST00000539036.5_1_12:16500588-16536519:+|nuORF', 'ENST00000538857.1_1_12:16507186-16536519:+|nuORF'] 141821 12934 YVDDTPAEQM True PC9_epitope_Rep1 1167.47540478511 1167.4743099358602 54.623 2 -0.18749522977569405 0.04630892830074276 0.5860571728248962 ['ENSG00000136628|ENST00000366923|EPRS1'] 111910 15433 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.5336349679301 64.373 1 -0.18751199003576394 0.04630892830074276 0.5861021142549747 ['ENSG00000213719|ENST00000375784|CLIC1'] 134857 19571 VYVGSFSWW True NCI_RA007_Epitope_Rep3 1129.5232813840498 1129.52218993586 85.365 2 -0.18752699108982163 0.046326120732123235 0.5861423324532203 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 64713 20397 LPWAPAGVAA True PC9_epitope_Rep3 951.5178020807898 951.5172549679301 83.708 1 -0.18753604643290797 0.046326120732123235 0.5861666072873215 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 89043 14185 QVLKDLVKV True PC9_epitope_Rep5 1040.6593809340397 1040.65828993586 59.571 2 -0.1876144476567768 0.04634418992402281 0.5863766918916233 ['ENSG00000104408|ENST00000220849|EIF3E'] 68223 5993 LTEAAPPAPP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 28.065 2 -0.18763514277986756 0.04635874507426493 0.5864321206685251 ['ENSG00000188766|ENST00000691638|SPRED3'] 135425 5917 WHLDIFRRSFR True NCI_RA007_Epitope_Rep5 1531.81604977115 1531.81385987172 29.445 4 -0.18775787826745688 0.04635874507426493 0.5867606253787762 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'nc|ENSG00000166348|Q70EL1-4|USP54', 'USP54|p.D221Ifs*19|1|0.13|ENSG00000166348|chr10:73541650-73541650|C/-|frameshift_variant'] 84992 3586 QEFQRAQAA True NCI_RA007_Epitope_Rep4 1047.5097565782296 1047.5086499358601 19.832 2 -0.18777660597388537 0.04635874507426493 0.586810716861971 ['ENSG00000204220|ENST00000374606|PFDN6', 'ENST00000395134.3_1_6:33258469-33258619:+|nuORF'] 11851 11341 DHHENKYLLL True PC9_epitope_Rep4 1280.65133543148 1280.6502299358601 51.4 2 -0.18784578461878357 0.04635874507426493 0.5869956733463589 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 25371 5586 FEAEVARA True H1975_Epitope_Rep3 891.4450310633498 891.44392993586 26.526 2 -0.18785078493833687 0.04635874507426493 0.5870090375091969 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 46493 13303 ISVPFGNSSP True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 56.446 2 -0.1879498832510111 0.046375933012541205 0.5872737622902501 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 103624 6855 SPTGKEFVSA True PC9_epitope_Rep2 1021.5080252427299 1021.50692993586 31.772 2 -0.18797234304473515 0.046375933012541205 0.587333725105441 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766642-105766726:+|nuORF'] 63792 19071 LNFTVAIDFT True PC9_epitope_Rep2 1139.5862755634298 1139.5851699358602 78.72 2 -0.18814226560797445 0.04648783814503296 0.5877869644542554 ['ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 90177 3154 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 16.044 2 -0.1881617219704659 0.04648783814503296 0.5878388138955282 ['ENST00000488788.2_1_20:629360-656142:-|nuORF', 'ENSG00000271303|ENST00000381962|SRXN1'] 47789 24934 IYFITFIFFVF True PC9_epitope_Rep2 1455.7842470939902 1455.7825949037901 101.58 3 -0.18819342549827112 0.046543787531493304 0.5879232801824023 ['nc|ENSG00000078795|Q9NZM6-7|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-5|PKD2L2', 'ENSG00000078795|ENST00000508883|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-2|PKD2L2'] 79749 14840 PEALEAQV True PC9_epitope_Rep3 855.4337976733099 855.43324496793 62.218 1 -0.18825761950376665 0.04659885207705859 0.5880942306433944 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 69007 16477 LTPSPVTVTV True PC9_epitope_Rep3 1012.5804619070001 1012.57936993586 68.516 2 -0.18825947074826577 0.04659885207705859 0.588099158995519 ['ENST00000496425.1_1_20:62373927-62374363:+|nuORF'] 5323 17674 ALREFWAL True PC9_epitope_Rep4 1004.5443511817998 1004.54324993586 76.008 2 -0.18827206161426935 0.04661602864016063 0.5881326758606918 ['ENSG00000175087|ENST00000374269|PDIK1L'] 70149 12774 LVPPDQPEV True PC9_epitope_Rep6 992.51786165044 992.51676993586 60.629 2 -0.18827384233778427 0.04661602864016063 0.5881374158162387 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 89661 14971 QYVDFHNQL True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 62.843 2 -0.18831582949797607 0.04663143739227608 0.5882491543158002 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 54921 17409 KYPSPFFVF True NCI_RA007_Epitope_Rep2 1130.5800679841798 1130.5789699358602 72.46 2 -0.1883378159408457 0.04663143739227608 0.5883076478121608 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 69366 7251 LTVTNYRL True H1975_Epitope_Rep1 978.54983048506 978.54872993586 32.901 2 -0.18834733842837992 0.04663143739227608 0.5883329779251355 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 78737 9447 PAAATVAVA True PC9_epitope_Rep4 769.4334037504899 769.4328549679301 43.948 1 -0.18835561141912968 0.04663143739227608 0.5883549824515737 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 65982 19217 LSDWYTMLY True H1975_Epitope_Rep3 1190.53179746242 1190.5307099358602 80.573 2 -0.18858735373284585 0.046718175964852476 0.5889706580874854 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 86297 15841 QISDTSVVL True PC9_epitope_Rep6 960.51277627 960.51222496793 73.202 1 -0.18859030599223783 0.046718175964852476 0.5889784925359547 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 48306 20347 IYQTWLKNL True PC9_epitope_Rep3 1177.64954452633 1177.64844993586 83.513 2 -0.1886410245833583 0.046718175964852476 0.5891130501335722 ['ENST00000507606.2_1_7:135347283-135358947:+|nuORF'] 119511 15556 VASEIMAVL True NCI_RA007_Epitope_Rep3 931.50485443859 931.50374993586 68.755 2 -0.1886889552281688 0.046718175964852476 0.5892401504695739 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554677.1_1_14:64902319-64908231:+|nuORF', 'ENST00000413059.1_1_X:57419910-57420861:-|nuORF', 'ENSG00000120254|ENST00000367321|MTHFD1L'] 31486 5145 GEASPPAPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 24.858 2 -0.18869636572326645 0.046718175964852476 0.5892597960150678 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 78983 10917 PAKFKMKYWGV True PC9_epitope_Rep1 1353.7267493012098 1353.72511490379 46.878 3 -0.1887298352890843 0.046718175964852476 0.5893485076937248 ['ENSG00000138207|ENST00000371464|RBP4'] 79945 16889 PESIAASIS True PC9_epitope_Rep5 873.44436235701 873.44381496793 69.976 1 -0.18873458394062176 0.046718175964852476 0.5893610917442079 ['ENST00000481424.5_1_7:99227639-99227963:+|nuORF'] 136393 10838 WTRFQWRRRAW True NCI_RA007_Epitope_Rep1 1647.8647312990697 1647.8636299358602 46.152 2 -0.188748253253314 0.046718175964852476 0.5893973125400715 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 119317 7272 VAMSRMRQR True PC9_epitope_Rep1 1133.59100118773 1133.58934490379 32.784 3 -0.1887808120434883 0.046718175964852476 0.5894835670972292 ['ENSG00000187961|ENST00000338591|KLHL17'] 65861 16661 LSDLNDELLLK True NCI_RA007_Epitope_Rep2 1271.69728256439 1271.69618993586 69.541 2 -0.1888433289811011 0.046736228151570816 0.5896491100791857 ['ENSG00000137628|ENST00000393743|DDX60'] 43371 18538 IGAGLSVVS True PC9_epitope_Rep5 801.4596184983301 801.4590749679301 76.329 1 -0.18897888555914177 0.046773216179366764 0.5900077138708797 ['nc|ENSG00000164124|Q7Z5S9-2|TMEM144', 'ENSG00000164124|ENST00000296529|TMEM144'] 109174 14164 TAMQILSGL True PC9_epitope_Rep4 932.5001034113199 932.49900993586 62.386 2 -0.1890494877525744 0.04679126664015604 0.5901942984416956 ['ENSG00000171798|ENST00000304613|KNDC1', 'KNDC1|p.A1582S|1|0.19|ENSG00000171798|chr10:133218897-133218897|G/T|missense_variant'] 56959 15253 LDQTLLDLNEM-[Oxidation] True NCI_RA007_Epitope_Rep1 1319.6278830556698 1319.6267899358602 63.405 2 -0.18906845019960533 0.046806657451763774 0.5902443896931189 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 17179 5563 EGSELCLEP True H1975_Epitope_Rep3 975.4219126602699 975.42080993586 26.439 2 -0.18908754100429107 0.046806657451763774 0.5902948106333101 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 61627 24494 LKNWEIRERKK True PC9_epitope_Rep5 1498.8732302940996 1498.8721299358601 99.296 2 -0.18912816702677748 0.046806657451763774 0.590402077143322 ['ENSG00000119707|ENST00000261973|RBM25', 'ENST00000532683.5_1_14:73569902-73577964:+|nuORF', 'RBM25|p.V706Lfs*18|1|0.09|ENSG00000119707|chr14:73111625-73111626|-/TTAATTTCCAAAT|frameshift_variant', 'RBM25|p.P707Sfs*27|1|0.08|ENSG00000119707|chr14:73111627-73111628|-/TTCATTTTATA|frameshift_variant'] 137464 13811 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.46948993586 58.429 2 -0.18913292412669416 0.046806657451763774 0.5904146347149253 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 99461 13269 SIAVENQL True PC9_epitope_Rep5 872.46034677432 872.45924993586 56.051 2 -0.1892074236857593 0.0468400923927449 0.5906112188734711 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1'] 121294 5248 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44962496793 25.253 1 -0.18920942484338163 0.0468400923927449 0.5906164974070786 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 142810 11882 YYSHLEGARF True PC9_epitope_Rep5 1241.5829215184897 1241.58182993586 50.703 2 -0.18921421714528092 0.0468400923927449 0.5906291378326771 ['ENSG00000142207|ENST00000382751|URB1'] 20266 7602 ENPNSLAIY True H1975_Epitope_Rep2 1019.49237517859 1019.49126993586 34.194 2 -0.18924415976208234 0.0468400923927449 0.590708102588541 ['DCAF12L1|p.N429Mfs*13|1|0.05|ENSG00000198889|chrX:126551325-126551325|G/-|frameshift_variant', 'ENSG00000198889|ENST00000371126|DCAF12L1', 'ENSG00000198354|ENST00000360028|DCAF12L2'] 130868 8833 VTCYLTWSP True PC9_epitope_Rep5 1068.49501803088 1068.49392993586 38.921 2 -0.18924942527170688 0.0468400923927449 0.5907219864074816 ['nc|ENSG00000100298|Q6NTF7-4|APOBEC3H', 'APOBEC3H|p.W145Lfs*17|1|0.35|ENSG00000100298|chr22:39101931-39101932|-/T|frameshift_variant', 'nc|ENSG00000100298|Q6NTF7-2|APOBEC3H', 'ENSG00000100298|ENST00000442487|APOBEC3H', 'nc|ENSG00000100298|Q6NTF7|APOBEC3H'] 92748 6319 RPAAGFVA True PC9_epitope_Rep2 787.4340724568299 787.43296993586 29.703 2 -0.18929485814533256 0.046858138169976714 0.5908417516134505 ['ENSG00000141526|ENST00000582743|SLC16A3'] 3660 20647 AGPVLLEDLS True PC9_epitope_Rep2 1012.54407639828 1012.54296993586 84.855 2 -0.1893568827677291 0.04687529581037845 0.591005167902601 ['ENST00000586212.1_1_19:3532513-3533660:+|nuORF'] 15413 12299 EAIYPPEVP True H1975_Epitope_Rep1 1013.5069626135698 1013.50586993586 52.335 2 -0.18942026298063216 0.04687529581037845 0.5911720528097947 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant'] 41609 8861 IADPNIAKL True NCI_RA007_Epitope_Rep3 953.55458151233 953.55348993586 41.947 2 -0.18944292478770655 0.04691138329894175 0.5912316977955755 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 61616 21547 LKLVQLFV True PC9_epitope_Rep3 958.6215388733399 958.62044993586 88.176 2 -0.18946888448820376 0.04691138329894175 0.5913000063422669 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA', 'ENST00000562424.1_1_16:89805011-89806109:-|nuORF'] 121466 5802 VEYETYKEA True H1975_Epitope_Rep3 1130.5131701928199 1130.5120699358602 27.341 2 -0.189537731803743 0.046948356807511735 0.591481081706731 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 44520 17615 ILLRQGEVEKL True PC9_epitope_Rep5 1296.7765359445996 1296.77488490379 72.765 3 -0.18958748773987147 0.04696373135458469 0.5916118682401109 ['ENST00000426448.1_1_22:20804701-20805505:+|nuORF'] 114002 9195 TPAPHSPWTA True PC9_epitope_Rep6 1063.50869394907 1063.50758993586 45.502 2 -0.1895988131039466 0.04696373135458469 0.5916416286734701 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 70617 26006 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 107.64 3 -0.18961713732026833 0.04696373135458469 0.5916897734133387 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 142541 10030 YYKPDSPEY True PC9_epitope_Rep5 1160.5026055091198 1160.5015099358602 43.56 2 -0.189627987923694 0.04696373135458469 0.5917182779956817 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 70477 17138 LVVDWDHHL True PC9_epitope_Rep3 1132.56654317836 1132.56490490379 71.079 3 -0.18966360161930132 0.04698177137557023 0.5918118138301686 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 68307 4027 LTEKANHYY True H1975_Epitope_Rep2 1137.54547338061 1137.54382490379 20.565 3 -0.18972291200251123 0.04699803149606299 0.5919675134895058 ['nc|ENSG00000127054|Q5TA45-2|INTS11', 'nc|ENSG00000127054|Q5TA45-4|INTS11', 'nc|ENSG00000127054|Q5TA45-3|INTS11', 'ENSG00000127054|ENST00000435064|INTS11', 'nc|ENSG00000127054|Q5TA45-5|INTS11', 'ENST00000478641.5_1_1:1248876-1249468:-|nuORF', 'ENST00000470030.6_1_1:1248876-1250311:-|nuORF'] 8514 12760 ATSRTTLVL True PC9_epitope_Rep3 960.5603951687599 960.55928993586 54.101 2 -0.1897411189631623 0.04699803149606299 0.5920152914509561 ['ENST00000254719.9_1_17:1787200-1792065:+|nuORF'] 30692 15125 GALEPHINAQI True PC9_epitope_Rep1 1161.61422164677 1161.6131299358601 62.998 2 -0.1897470926174705 0.04699803149606299 0.5920309653916199 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 106007 11041 SSVPGVRLL True NCI_RA007_Epitope_Rep4 926.5549158655 926.55380993586 49.342 2 -0.1898066093398408 0.04701251017279558 0.5921870773143888 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 127472 22160 VNLGAALLL True PC9_epitope_Rep2 882.5538532363399 882.5533049679301 90.726 1 -0.1898445910290824 0.04701251017279558 0.5922866548103954 ['ENST00000564806.1_1_16:30036506-30036905:-|nuORF', 'nc|ENSG00000149926|Q71RH2-2|TLCD3B', 'ENSG00000149926|ENST00000380495|TLCD3B'] 96529 12039 SADRGLVL True PC9_epitope_Rep3 829.46576650793 829.46466993586 51.344 2 -0.18987564818137737 0.04701251017279558 0.5923680501663124 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 57267 6787 LDYHTSSCFR True H1975_Epitope_Rep3 1227.53425707391 1227.5326049037901 31.06 3 -0.18987676890345834 0.04701251017279558 0.5923709869129152 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENST00000560078.1_1_15:41100333-41100738:+|nuORF'] 36514 18566 GVGPVNISV True PC9_epitope_Rep4 840.4705175352 840.46942993586 79.491 2 -0.18989613299746447 0.04701251017279558 0.592421723529577 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 59284 8240 LFGGLCFRFRD True NCI_RA007_Epitope_Rep2 1329.6652116738098 1329.66410993586 36.689 2 -0.1899688153909348 0.04704769114307343 0.5926120743278132 ['nc|ENSG00000102226|P51784|USP11'] 117650 13847 TVTNAVVTV True PC9_epitope_Rep3 902.50729696674 902.50618993586 58.343 2 -0.18999664108854647 0.04704769114307343 0.5926849116976821 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 60427 7929 LGVGWRRG True NCI_RA007_Epitope_Rep1 899.5089687325899 899.50786993586 34.835 2 -0.19001626529457316 0.04704769114307343 0.5927362684606463 ['ENST00000544365.5_1_1:53373489-53379588:-|nuORF'] 28523 11071 FSEENSALEY True H1975_Epitope_Rep2 1187.4982484046698 1187.49767496793 47.617 1 -0.19005737523405802 0.04706572547832176 0.5928438210673409 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 84223 20724 PYLFPVAA True PC9_epitope_Rep4 876.4745402864799 876.47344993586 87.879 2 -0.19006998905332062 0.0470819771402619 0.5928768127437046 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 45373 19243 IQDNYLLI True PC9_epitope_Rep6 990.5385970950199 990.53750993586 86.669 2 -0.19007943789626452 0.0470819771402619 0.5929015236471494 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant', 'FAT3|p.H1979Tfs*13|1|0.35|ENSG00000165323|chr11:92799397-92799397|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7-2|FAT3', 'FAT3-DPP3|1|fusion'] 10907 6071 DAAENGQMEVP True H1975_Epitope_Rep2 1159.4815527947098 1159.47991490379 28.329 3 -0.19008716730436737 0.0470819771402619 0.5929217360999478 ['nc|ENSG00000144488|Q6ZVH7-2|ESPNL'] 119563 18906 VATDFFTVL True NCI_RA007_Epitope_Rep4 1011.5276980581499 1011.52660993586 81.749 2 -0.1900993412413017 0.04710000946163308 0.5929535678638828 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 20476 10143 EPISIYFSQ True H1975_Epitope_Rep3 1082.52842633414 1082.52732993586 44.059 2 -0.19014878398610494 0.047118041100556333 0.5930828083800329 ['ENSG00000101842|ENST00000217957|VSIG1'] 89990 6147 RDLELQAA True NCI_RA007_Epitope_Rep3 914.48214484806 914.48104993586 31.173 2 -0.1902358199359222 0.0471342882552177 0.5933101603611001 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000590856.1_1_17:73826107-73826739:-|nuORF'] 56958 14742 LDQTLLDLNEM-[Oxidation] True H1975_Epitope_Rep3 1319.6278830556698 1319.6267899358602 62.08 2 -0.19023960766454823 0.0471342882552177 0.59332005002985 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 58695 15839 LERQLRREIEI True PC9_epitope_Rep5 1453.83651043221 1453.83487490379 65.915 3 -0.1902572957703534 0.0471342882552177 0.5933662282902119 ['AURKC|p.H86R|1|0.24|ENSG00000105146|chr19:57232185-57232185|A/G|missense_variant'] 35265 10279 GRDKSIVL True PC9_epitope_Rep5 886.5236157372199 886.52250993586 44.525 2 -0.19027901151822366 0.047151425706230723 0.5934229103233546 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2'] 33690 22364 GLGVGLLYL True PC9_epitope_Rep3 903.5429541994699 903.54184993586 91.303 2 -0.1903275019704195 0.047151425706230723 0.5935494347149672 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 30745 16382 GALNKASTVI True PC9_epitope_Rep5 972.56039516876 972.55928993586 68.01 2 -0.19035976285752895 0.04718837508514342 0.5936335778515699 ['nc|ENSG00000240184|Q9UN70-2|PCDHGC3', 'ENSG00000240184|ENST00000308177|PCDHGC3'] 41689 11168 IAHEIYQKILS True NCI_RA007_Epitope_Rep1 1313.7343367794501 1313.73268490379 47.44 3 -0.1903940607059029 0.04722532306586192 0.5937230039772348 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 63846 8283 LNLAVSGR True PC9_epitope_Rep2 828.48175092524 828.48064993586 37.22 2 -0.19052929556488238 0.04728029514710056 0.5940753073983926 ['ENST00000596643.5_1_19:17622170-17622251:-|nuORF'] 79118 4799 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 25.033 2 -0.19058452217050748 0.04728029514710056 0.5942190419113249 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 91852 24887 RKKKRCRL True NCI_RA007_Epitope_Rep1 1086.6920355583397 1086.6909299358601 103.01 2 -0.1905993433202562 0.04729742512817602 0.5942576023200224 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF', 'ENST00000478462.5_1_X:11777869-11779061:+|nuORF', 'nc|ENSG00000005302|Q8N5Y2-5|MSL3', 'nc|ENSG00000005302|Q8N5Y2-2|MSL3', 'nc|ENSG00000005302|Q8N5Y2-3|MSL3', 'ENSG00000005302|ENST00000312196|MSL3'] 92751 5897 RPAAGFVA True PC9_epitope_Rep4 787.4340724568299 787.43296993586 29.583 2 -0.19062664434176083 0.04729742512817602 0.5943286167482358 ['ENSG00000141526|ENST00000582743|SLC16A3'] 66255 9339 LSFEEDFQN True NCI_RA007_Epitope_Rep5 1127.4771190372699 1127.4760299358602 42.564 2 -0.19070100452178537 0.04735328616292709 0.594521940791362 ['nc|ENSG00000165509|Q8TD91-2|MAGEC3'] 33015 6564 GIGTVPVGR True NCI_RA007_Epitope_Rep1 854.4974009893798 854.49630993586 29.547 2 -0.19079433456673334 0.04742806333831514 0.5947643783456882 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 45545 11467 IQRQRNTLVK True PC9_epitope_Rep6 1254.75205253226 1254.7504049037902 55.174 3 -0.19088894480121824 0.04744518643234143 0.5950099083697706 ['ENST00000468386.2_1_2:70057024-70067283:+|nuORF'] 75268 24719 NIIEAINELLV True PC9_epitope_Rep1 1239.70745332527 1239.70634993586 99.968 2 -0.1908975925348362 0.04744518643234143 0.5950323390378573 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000555522.1_1_14:75469672-75471687:+|nuORF'] 128214 13497 VPNKFLVTA True PC9_epitope_Rep1 987.5753169569099 987.57420993586 56.773 2 -0.19103254549554868 0.047501040444932086 0.595382128614676 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 91851 25077 RKKKRCRL True NCI_RA007_Epitope_Rep1 1086.6920355583397 1086.6909299358601 103.78 2 -0.19107295782825395 0.04751726094769696 0.5954867818530606 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF', 'ENST00000478462.5_1_X:11777869-11779061:+|nuORF', 'nc|ENSG00000005302|Q8N5Y2-5|MSL3', 'nc|ENSG00000005302|Q8N5Y2-2|MSL3', 'nc|ENSG00000005302|Q8N5Y2-3|MSL3', 'ENSG00000005302|ENST00000312196|MSL3'] 78554 17455 NYQGHFHLF True PC9_epitope_Rep3 1161.5355774032498 1161.5344899358602 72.316 2 -0.19112095125646503 0.04751726094769696 0.5956110116764921 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 70123 10429 LVPGHLDQV True PC9_epitope_Rep6 976.53418042092 976.53308993586 50.869 2 -0.19112680182162528 0.04751726094769696 0.5956261515864777 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D'] 32855 15638 GHPVPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54290993586 65.427 2 -0.19120636417423215 0.047532580529232635 0.5958319513161735 ['ENST00000292748.7_2_22:21367412-21368150:-|nuORF'] 29467 8024 FVEQHTPQL True NCI_RA007_Epitope_Rep4 1097.5505587610498 1097.54946993586 37.631 2 -0.19121319260206196 0.047532580529232635 0.5958496063008071 ['ENSG00000168878|ENST00000519937|SFTPB'] 63406 9963 LLVLHLSHNR True NCI_RA007_Epitope_Rep2 1200.70912509112 1200.7080299358602 43.381 2 -0.191242879629366 0.047532580529232635 0.595926348235042 ['ENSG00000188783|ENST00000343110|PRELP'] 85258 9309 QEQGVSVV True PC9_epitope_Rep2 844.4290466460399 844.4279499358599 41.146 2 -0.1912623168959698 0.047532580529232635 0.5959765816572183 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.S1928Lfs*58|1|0.21|ENSG00000171467|chr6:43338204-43338216|TTCTAGAAGCTGA/-|frameshift_variant'] 7113 5877 AQVHVNGGAL True NCI_RA007_Epitope_Rep4 964.5090283022399 964.50792993586 29.23 2 -0.19135622563928464 0.047588424437299034 0.5962191383069922 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant'] 38018 6125 HANVPERSNVG True PC9_epitope_Rep3 1178.57923312038 1178.57758490379 28.607 3 -0.1914804191551321 0.047605537902859735 0.5965395612340746 ['CDH11|p.Q563Rfs*10|1|0.26|ENSG00000140937|chr16:64950975-64950975|C/-|frameshift_variant', 'nc|ENSG00000140937|P55287-2|CDH11', 'ENSG00000140937|ENST00000268603|CDH11', 'ENST00000569128.1_1_16:65025665-65032510:-|nuORF', 'CDH11|p.R404Efs*14|1|0.55|ENSG00000140937|chr16:64982092-64982092|C/-|frameshift_variant'] 33417 8307 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44286993586 36.904 2 -0.1915478004699875 0.047605537902859735 0.596713237169733 ['ENSG00000170684|ENST00000303809|ZNF296'] 56110 8983 LATVTVRP True PC9_epitope_Rep4 855.5178020807899 855.51670993586 42.108 2 -0.19158759660579505 0.04764246401755149 0.596815755917572 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 128661 8233 VPVKQGGLG True PC9_epitope_Rep2 853.5021520166497 853.50104993586 37.025 2 -0.19172687875532757 0.04769739952718676 0.5971742319072153 ['DPP10|p.R395L|1|0.13|ENSG00000175497|chr2:115768367-115768367|G/T|missense_variant'] 4773 15953 ALDSTNVEL True PC9_epitope_Rep4 960.47639076128 960.47584496793 69.292 1 -0.19173394281341163 0.04769739952718676 0.5971923993337088 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 115682 17417 TSAESFVNV True PC9_epitope_Rep3 952.45017601344 952.44962496793 72.165 1 -0.19181649302246445 0.04771450725268075 0.5974046054135129 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 71384 10255 LYSERTIL True PC9_epitope_Rep1 993.5494961318899 993.54838993586 44.329 2 -0.1918451534310492 0.04771450725268075 0.5974782387115865 ['ENSG00000123384|ENST00000243077|LRP1'] 78494 11271 NYNNQSSNFGP True PC9_epitope_Rep1 1240.51087877704 1240.50978993586 48.234 2 -0.19190293594666488 0.04773251635840992 0.597626625614659 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 14823 12321 DVSKWSERTRK True H1975_Epitope_Rep3 1390.7317110104998 1390.73005490379 52.575 3 -0.19197975068479337 0.04776853252647504 0.5978237513331334 ['ENST00000488487.2_1_6:3127447-3138314:+|nuORF', 'nc|ENSG00000137274|Q86WA6-2|BPHL', 'ENST00000490918.5_1_6:3118974-3138432:+|nuORF', 'ENSG00000137274|ENST00000380379|BPHL'] 125144 16379 VIGPELVHV True PC9_epitope_Rep4 961.55966689277 961.55856993586 70.963 2 -0.1919811517706183 0.04776853252647504 0.5978273454216786 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'ENST00000485409.5_1_3:196921289-197023334:-|nuORF'] 40092 8957 HPVLMSEA True PC9_epitope_Rep1 882.4269384710601 882.42584993586 39.296 2 -0.19207627992313914 0.04782436035627163 0.5980712485212948 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 76200 7020 NNLSASKVL True NCI_RA007_Epitope_Rep4 944.52909504048 944.52798993586 33.63 2 -0.19212182788606513 0.04786127604856095 0.5981879462699262 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 64653 8980 LPTTNSGVSA True PC9_epitope_Rep5 945.47672511445 945.4761749679301 39.485 1 -0.19216556058870357 0.04787837531200363 0.5982999415955944 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 76256 4819 NPKDNNQFASA True PC9_epitope_Rep3 1204.54726428576 1204.54616993586 23.632 2 -0.19216715990691924 0.04787837531200363 0.5983040363408831 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 91771 14379 RKFWAGIVF True NCI_RA007_Epitope_Rep2 1122.6338348925399 1122.6327299358602 60.598 2 -0.19220950906388018 0.04788913466810353 0.5984124385833987 ['ENSG00000165029|ENST00000374736|ABCA1'] 31684 8332 GEFSKEWAA True NCI_RA007_Epitope_Rep3 1023.4661604307498 1023.46506993586 39.889 2 -0.19222307327723615 0.04788913466810353 0.5984471492323274 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 20030 18107 ELYSQQHRQR True PC9_epitope_Rep3 1343.66944510711 1343.66834993586 74.844 2 -0.19224860271190158 0.04788913466810353 0.5985124655394107 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 7739 4965 ASPPEQPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 24.172 2 -0.19226220561273866 0.04788913466810353 0.598547261124775 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A'] 19279 10647 ELKKSTVIL True PC9_epitope_Rep6 1029.6433965167298 1029.6422899358602 51.772 2 -0.19227752924535524 0.04788913466810353 0.5985864524021907 ['ASPM|p.F3079L|1|0.05|ENSG00000066279|chr1:197093109-197093109|A/T|missense_variant'] 45316 18542 IQAEEIMKL True PC9_epitope_Rep5 1073.57908200801 1073.5779899358602 76.344 2 -0.19233952210577257 0.04788913466810353 0.5987449401689002 ['ENSG00000125656|ENST00000245816|CLPP'] 103014 9991 SPFPGHVGA True PC9_epitope_Rep3 867.42390169595 867.42280993586 43.387 2 -0.19234166625360827 0.04788913466810353 0.5987504199687834 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 127112 15597 VLTLQIQSL True PC9_epitope_Rep2 1013.61209638845 1013.61098993586 65.271 2 -0.1923596721776982 0.04788913466810353 0.5987964329210651 ['ENST00000484256.1_1_22:29191536-29192243:-|nuORF', 'nc|ENSG00000100219|P17861|XBP1'] 33090 14074 GIPEVDLGI True NCI_RA007_Epitope_Rep5 911.4963979298699 911.49530993586 60.824 2 -0.19236716641733684 0.04788913466810353 0.5988155814289464 ['ENST00000461762.5_1_9:132591268-132595829:-|nuORF', 'ENSG00000136819|ENST00000372447|C9orf78'] 142944 4524 YYYYHRQYRRV True NCI_RA007_Epitope_Rep2 1665.81644369397 1665.81534993586 22.23 2 -0.19238637322981947 0.047905323653962495 0.5988646499109398 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2009625-2011290:+|nuORF'] 11211 4560 DEDKEKTFEEK True H1975_Epitope_Rep3 1396.6358045066397 1396.6347099358602 22.66 2 -0.19244374142435433 0.047905323653962495 0.5990111528243889 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 114276 11291 TPPGPLASA True PC9_epitope_Rep5 809.42831837005 809.4272299358599 48.425 2 -0.19245924889620597 0.047905323653962495 0.5990507397762445 ['ENSG00000124875|ENST00000226317|CXCL6'] 46147 21101 ISLEKLFVT True PC9_epitope_Rep3 1048.6168474157198 1048.61574993586 86.446 2 -0.1925296228206595 0.047920604914933836 0.5992303079685666 ['ENSG00000172901|ENST00000357872|LVRN', 'ENST00000504467.5_1_5:115348136-115357442:+|nuORF'] 104212 6174 SQGQPPPAV True PC9_epitope_Rep5 879.4450310633499 879.44392993586 28.732 2 -0.19256984326805915 0.047920604914933836 0.5993328767679436 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB'] 32655 11387 GGPGGVGGL True PC9_epitope_Rep3 669.34458874609 669.34404496793 48.802 1 -0.19257337621523016 0.047920604914933836 0.5993418843212879 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.G136E|1|0.35|ENSG00000172867|chr12:52651736-52651736|C/T|missense_variant'] 37801 12532 GYEPPVQESV True PC9_epitope_Rep6 1103.51350454599 1103.5124099358602 59.639 2 -0.1926153597751081 0.047920604914933836 0.5994488997185801 ['ENSG00000145425|ENST00000274065|RPS3A'] 16136 6250 EEASFYYGT True PC9_epitope_Rep5 1065.42910621569 1065.42800993586 29.019 2 -0.19271683186353566 0.04797278140062376 0.5997073575532431 ['ENSG00000188501|ENST00000695545|LCTL'] 134093 11936 VYKTIMEQF True NCI_RA007_Epitope_Rep5 1157.57908200801 1157.5779899358602 52.568 2 -0.1927253004132621 0.04797278140062376 0.5997289153155174 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 56114 8535 LATVTVRP True PC9_epitope_Rep6 855.5178020807899 855.51670993586 42.581 2 -0.1927453964096533 0.04797278140062376 0.5997800646026885 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 57481 8068 LEDETAIK True PC9_epitope_Rep1 917.4705771048499 917.46948993586 35.857 2 -0.19277499789983957 0.04797278140062376 0.5998553882249953 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'ENSG00000118997|ENST00000312428|DNAH7'] 98986 10562 SHDFYSHEL True PC9_epitope_Rep1 1133.4777877436102 1133.47615490379 45.518 3 -0.19277879716526972 0.04797278140062376 0.5998650541112365 ['ENSG00000095015|ENST00000399503|MAP3K1'] 141842 5359 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 27.18 2 -0.19286046452569164 0.04799077609344876 0.6000727352558854 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 30944 8356 GARLAAEGYLV True H1975_Epitope_Rep2 1118.6084079903399 1118.60730993586 37.094 2 -0.19293698011090682 0.04800786270507296 0.6002671548346878 ['ENSG00000168758|ENST00000305476|SEMA4C', 'ENST00000467747.1_1_2:97526365-97527817:-|nuORF', 'ENST00000474420.1_1_2:97526365-97527817:-|nuORF'] 235 19939 AAFVHFYGV True PC9_epitope_Rep1 1009.5021520166498 1009.50104993586 81.515 2 -0.19297725190621068 0.04800786270507296 0.600369419628586 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 55333 6601 LAEGTAIK True PC9_epitope_Rep1 801.4596184983299 801.45852993586 30.193 2 -0.19310418128661408 0.04802404036967738 0.6006914579562829 ['nc|ENSG00000109814|O60701-2|UGDH', 'ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH'] 57579 7353 LEDVLESK True NCI_RA007_Epitope_Rep1 931.48622716899 931.48512993586 32.595 2 -0.1931203872103019 0.04802404036967738 0.6007325439432966 ['nc|ENSG00000141013|O95995-2|GAS8', 'ENSG00000141013|ENST00000268699|GAS8', 'ENST00000564789.5_1_16:90106452-90109750:+|nuORF', 'ENST00000569558.5_1_16:90103573-90109750:+|nuORF'] 74511 22169 NFIGSVYNYI True PC9_epitope_Rep1 1188.5815245361598 1188.5804299358601 90.09 2 -0.19312557452465737 0.04802404036967738 0.6007456935820901 ['ENST00000554266.5_1_12:25348248-25356752:+|nuORF'] 65857 16282 LSDLNDELLLK True H1975_Epitope_Rep1 1271.69728256439 1271.69618993586 67.983 2 -0.193152252603012 0.048039308324671647 0.6008133101737432 ['ENSG00000137628|ENST00000393743|DDX60'] 114255 6170 TPNGNSLSA True PC9_epitope_Rep1 859.40356017419 859.4030149679301 28.548 1 -0.1931548213911256 0.048039308324671647 0.600819819865661 ['ENSG00000092621|ENST00000641023|PHGDH', 'PHGDH|p.H275Qfs*2|1|0.28|ENSG00000092621|chr1:119737144-119737145|-/A|frameshift_variant'] 89290 13603 QVYDPTTTY True H1975_Epitope_Rep2 1086.4869554449801 1086.4858499358602 57.46 2 -0.19326680960951978 0.048039308324671647 0.6011034442316644 ['A1CF|p.N370Kfs*11|1|0.32|ENSG00000148584|chr10:50816037-50816038|-/T|frameshift_variant', 'A1CF|p.Q351Rfs*34|1|0.22|ENSG00000148584|chr10:50816096-50816096|G/-|frameshift_variant', 'A1CF|p.L439*|1|0.15|ENSG00000148584|chr10:50813888-50813888|A/-|frameshift_variant', 'nc|ENSG00000148584|Q9NQ94-5|A1CF', 'nc|ENSG00000148584|Q9NQ94-6|A1CF', 'nc|ENSG00000148584|Q9NQ94-3|A1CF', 'ENSG00000148584|ENST00000373997|A1CF', 'nc|ENSG00000148584|Q9NQ94|A1CF', 'nc|ENSG00000148584|Q9NQ94-4|A1CF'] 70613 25508 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 105.57 3 -0.19331912627633174 0.048039308324671647 0.6012358285707359 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 33786 11363 GLLENNLG True H1975_Epitope_Rep3 828.4341320264799 828.43302993586 48.819 2 -0.19333717091993266 0.04805729835966437 0.601281472629966 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'ENST00000460333.5_1_1:12359354-12409038:+|nuORF', 'ENST00000487188.1_1_1:12371595-12395946:+|nuORF'] 136003 4904 WQTMRFKPPPP True PC9_epitope_Rep1 1383.7121618662297 1383.71050490379 23.728 3 -0.19336860387743393 0.048072562358276644 0.6013609618457473 ['ENSG00000001084|ENST00000650454|GCLC'] 100793 11374 SLEGLEVAP True H1975_Epitope_Rep2 913.47566248529 913.47511496793 48.799 1 -0.19337575812549052 0.048072562358276644 0.6013790501900556 ['nc|ENSG00000183837|Q9UL41-2|PNMA3', 'ENSG00000183837|ENST00000593810|PNMA3'] 100030 13451 SIQRTCLDL True PC9_epitope_Rep6 1047.5382798251899 1047.5371899358602 63.431 2 -0.19341000938660038 0.048072562358276644 0.6014656300289395 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 101717 10250 SLNDAGVEL True NCI_RA007_Epitope_Rep1 916.45017601344 916.44906993586 43.881 2 -0.19342524301233743 0.048072562358276644 0.6015041273378997 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 111021 10141 THDDSHLVSL True PC9_epitope_Rep5 1122.5305515924601 1122.5289149037899 43.992 3 -0.19344755344343426 0.048090550065191515 0.6015604974893629 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 70178 4035 LVQADEKEANV True H1975_Epitope_Rep3 1214.6142812164198 1214.6131899358602 20.651 2 -0.19350766705967412 0.04812470477090222 0.6017123162788394 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 142126 22262 YVPPELITL True PC9_epitope_Rep5 1043.59029831471 1043.58920993586 90.638 2 -0.19353968925678292 0.04812470477090222 0.6017931500550868 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 45378 6545 IQDSRTLP True PC9_epitope_Rep2 928.4977949122 928.49668993586 30.589 2 -0.1936406986756647 0.04812470477090222 0.6020479496756426 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 42831 7461 IEQELTSKQG True NCI_RA007_Epitope_Rep1 1131.57716743171 1131.57606993586 33.013 2 -0.19367760400744927 0.04812470477090222 0.6021409768159669 ['nc|ENSG00000141376|Q9H6U6-6|BCAS3', 'ENSG00000141376|ENST00000407086|BCAS3', 'nc|ENSG00000141376|Q9H6U6|BCAS3', 'nc|ENSG00000141376|Q9H6U6-7|BCAS3', 'nc|ENSG00000141376|Q9H6U6-3|BCAS3', 'nc|ENSG00000141376|Q9H6U6-8|BCAS3'] 98445 17413 SFFLSCSLCL True NCI_RA007_Epitope_Rep4 1118.5140392233 1118.5129499358602 75.401 2 -0.19374705568602693 0.04818047840380909 0.6023159450047778 ['ENST00000581424.1_1_17:61228485-61228857:+|nuORF'] 56957 14788 LDQTLLDLNEM-[Oxidation] True H1975_Epitope_Rep1 1319.6278830556698 1319.6267899358602 62.107 2 -0.1937606817477214 0.048187536598726835 0.6023502577771583 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 10962 13281 DAIITQQLVKD True H1975_Epitope_Rep3 1242.68196685342 1242.68086993586 56.342 2 -0.19376261176818324 0.048187536598726835 0.6023551175012511 ['nc|ENSG00000177853|Q6AHZ1-2|ZNF518A', 'ZNF518A|p.I1208Vfs*15|1|0.07|ENSG00000177853|chr10:96159943-96159944|-/GTGTTCCTTC|frameshift_variant', 'ENSG00000177853|ENST00000316045|ZNF518A'] 27908 24915 FQEDRYWRFNE True H1975_Epitope_Rep2 1588.7058901854796 1588.7047899358602 102.41 2 -0.19381029666159866 0.048187536598726835 0.6024751548611101 ['MMP15|p.Q560Rfs*65|1|0.18|ENSG00000102996|chr16:58045113-58045113|C/-|frameshift_variant', 'ENSG00000102996|ENST00000219271|MMP15'] 17915 16287 EIAGYILE True NCI_RA007_Epitope_Rep4 906.4698488288599 906.46930496793 70.635 1 -0.19381081287706572 0.048187536598726835 0.6024764540005357 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 24339 17559 EYVSQHLVF True PC9_epitope_Rep2 1120.5553097883198 1120.5542099358602 72.813 2 -0.19381307982961266 0.048187536598726835 0.6024821590678892 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 138582 7739 YIDHGDPQV True PC9_epitope_Rep5 1042.4719740871801 1042.47086993586 34.709 2 -0.1938417109788046 0.048187536598726835 0.6025542011126667 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 121299 5390 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44962496793 25.797 1 -0.19387908275137875 0.048187536598726835 0.6026482035296241 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 79399 11596 PASTTTPGL True PC9_epitope_Rep1 843.43379767331 843.43270993586 49.481 2 -0.1938958850041872 0.048187536598726835 0.6026904546354631 ['ENSG00000205277|ENST00000536621|MUC12', 'nc|ENSG00000205277|Q9UKN1|MUC12'] 76254 4839 NPKDNNQFASA True PC9_epitope_Rep1 1204.54726428576 1204.54616993586 23.483 2 -0.19391510300735615 0.048187536598726835 0.6027387711774721 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 130931 5990 VTDGPGNYKY True H1975_Epitope_Rep3 1112.51383889916 1112.51274993586 28.053 2 -0.19392606253029415 0.048187536598726835 0.6027663204220433 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 114634 17558 TQDTQLITV True PC9_epitope_Rep5 1017.5342399905699 1017.53314993586 72.545 2 -0.19394814531759333 0.048187536598726835 0.6028218207786509 ['ENSG00000164258|ENST00000296684|NDUFS4'] 55258 17609 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.49866993586 73.048 2 -0.19394901831200864 0.048187536598726835 0.6028240145958006 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 78541 12002 NYPSAFHSV True PC9_epitope_Rep3 1020.46649478392 1020.46538993586 51.192 2 -0.1939542329594423 0.048187536598726835 0.6028371184748618 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 2608 3992 AERPPGVAA True NCI_RA007_Epitope_Rep4 866.4610154806599 866.45990993586 21.607 2 -0.19397990481978206 0.04820005288407056 0.6029016186718419 ['ENST00000545260.5_2_10:35104042-35104177:-|nuORF'] 114850 12565 TQNEVAAAL True PC9_epitope_Rep2 915.4661604307498 915.46561496793 53.64 1 -0.19402693153315217 0.04820005288407056 0.6030197270243631 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 119757 13407 VAYILYRRYRE True H1975_Epitope_Rep1 1500.82013209208 1500.81847490379 56.683 3 -0.1940285365122854 0.04820005288407056 0.6030237569137963 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH', 'ENST00000463553.1_1_1:151755369-151755498:-|nuORF'] 100403 12692 SLAACVLTS True NCI_RA007_Epitope_Rep2 863.4422541820301 863.44170496793 53.985 1 -0.19403536842450259 0.04820005288407056 0.6030409101686566 ['ENSG00000140519|ENST00000268122|RHCG', 'ENST00000558184.1_1_15:90021028-90029524:-|nuORF'] 54631 7330 KYLEETNSL True NCI_RA007_Epitope_Rep3 1095.5448046742702 1095.54370993586 35.956 2 -0.1940394781826623 0.04820005288407056 0.603051228162571 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 77270 11143 NSATGVPTV True PC9_epitope_Rep5 844.42904664604 844.4284949679301 47.847 1 -0.19405362992136957 0.04820005288407056 0.6030867541890785 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 106590 8668 STPEAPYASL True PC9_epitope_Rep5 1034.4920408254197 1034.49094993586 38.285 2 -0.19409910433907485 0.04820005288407056 0.6032008753700544 ['nc|ENSG00000143365|P51449-2|RORC', 'ENSG00000143365|ENST00000318247|RORC'] 70605 25475 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 106.0 3 -0.19419648390534733 0.04823691616144447 0.6034450703423226 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 83327 9449 PTEDELSLP True H1975_Epitope_Rep2 999.4760564081099 999.47494993586 41.313 2 -0.19424356626237507 0.048273778046385135 0.603563046098353 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 103296 14236 SPLPPGLSAA True PC9_epitope_Rep5 908.4967322830399 908.49562993586 59.764 2 -0.19427926928940242 0.048289928424392364 0.6036524688145678 ['TBATA|p.A182Qfs*63|1|0.45|ENSG00000166220|chr10:70777299-70777299|C/-|frameshift_variant'] 46210 10772 ISNEFKVEV True PC9_epitope_Rep2 1063.5549754351498 1063.5538699358601 46.754 2 -0.19429798863849834 0.048289928424392364 0.6036993401618289 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 116851 9675 TVESEPAG True PC9_epitope_Rep3 788.3552129994399 788.35410993586 42.163 2 -0.19430596456691934 0.048289928424392364 0.6037193082301691 ['nc|ENSG00000101213|Q13882-2|PTK6'] 78291 13483 NYIMKIHNF True PC9_epitope_Rep2 1178.5906497512199 1178.58901490379 57.146 3 -0.1944091161981744 0.048307901495694215 0.6039773993914539 ['ENSG00000101126|ENST00000621696|ADNP'] 3451 6406 AGLAAEVAA True H1975_Epitope_Rep3 771.41266830591 771.41211496793 29.618 1 -0.19443317466536425 0.04832222369091905 0.6040375541031455 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF'] 36172 14524 GVAVAVAEIG True PC9_epitope_Rep6 884.4967322830399 884.49618496793 67.757 1 -0.19444807345051845 0.04832222369091905 0.6040747985944188 ['ENST00000492039.6_1_2:68374697-68384644:-|nuORF', 'ENST00000468984.1_1_2:68384284-68384644:-|nuORF'] 28329 13737 FRRRRWRRRME True NCI_RA007_Epitope_Rep1 1703.9491467127098 1703.9475149037899 57.45 3 -0.19450980067457 0.04832222369091905 0.6042290431456361 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 99999 9013 SIPSTTSAP True PC9_epitope_Rep2 859.42871229287 859.42760993586 40.02 2 -0.19458105132193806 0.04832222369091905 0.6044069581454092 ['ENSG00000215182|ENST00000621226|MUC5AC'] 122358 10200 VGDGAEWGLG True H1975_Epitope_Rep2 959.4348603024698 959.43431496793 44.238 1 -0.19459175063099327 0.04832222369091905 0.6044336629063106 ['TRIM58|p.E354D|1|0.14|ENSG00000162722|chr1:247876090-247876090|A/T|missense_variant'] 31172 13226 GAYGTMTYL True H1975_Epitope_Rep3 975.4371688015899 975.43661496793 56.129 1 -0.19463462811373305 0.04833928133084084 0.6045406514900018 ['ENSG00000044446|ENST00000379942|PHKA2', 'ENST00000473597.1_1_X:18911605-18913336:-|nuORF', 'ENST00000469485.5_1_X:18911605-18915466:-|nuORF'] 69488 18897 LVAPPLPAA True PC9_epitope_Rep5 847.51673945163 847.51619496793 77.707 1 -0.19467384431842302 0.04833928133084084 0.6046384612936931 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN', 'NCLN-ACSBG2|1|fusion', 'NCLN|p.W233Gfs*179|1|0.36|ENSG00000125912|chr19:3198893-3198893|C/-|frameshift_variant'] 73461 14670 MVAPAVASV True PC9_epitope_Rep4 843.4524249429099 843.45187496793 64.363 1 -0.19480906898814693 0.04837613293051359 0.6049754115341333 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.V284*|1|0.43|ENSG00000177606|chr1:58782222-58782222|T/-|frameshift_variant', 'JUN|p.N291Tfs*23|1|0.23|ENSG00000177606|chr1:58782201-58782201|C/-|frameshift_variant'] 107781 19179 SVTDLAFKV True PC9_epitope_Rep5 978.5385970950199 978.53750993586 78.809 2 -0.19484936954219964 0.04843186495723268 0.6050757369140481 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 236 18747 AAFVHFYGV True PC9_epitope_Rep4 1009.5021520166498 1009.50104993586 80.194 2 -0.19487531120510565 0.048449831954986596 0.6051402938199775 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 5648 14901 APAAHSDAVL True PC9_epitope_Rep3 950.4821448480599 950.48104993586 62.452 2 -0.19492298797883037 0.048482102401449935 0.6052588924054425 ['RAB3GAP1|p.E741Ifs*5|1|0.06|ENSG00000115839|chr2:135153807-135153808|-/ATTA|frameshift_variant', 'nc|ENSG00000115839|Q15042-4|RAB3GAP1', 'ENSG00000115839|ENST00000264158|RAB3GAP1', 'nc|ENSG00000115839|Q15042-3|RAB3GAP1'] 75310 13217 NILMCFWYL True NCI_RA007_Epitope_Rep3 1201.56640914933 1201.5653099358601 59.259 2 -0.19496366415421393 0.048482102401449935 0.6053600284379282 ['ENSG00000162972|ENST00000392290|MAIP1'] 89235 18915 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48506993586 77.541 2 -0.1949808689348486 0.048482102401449935 0.6054027925397975 ['ENSG00000167658|ENST00000309311|EEF2'] 132672 17517 VVGGIYGV True PC9_epitope_Rep5 762.42759009406 762.4270449679301 72.384 1 -0.19499750259286683 0.048482102401449935 0.6054441295144709 ['ENSG00000167658|ENST00000309311|EEF2'] 128062 6042 VPLAGAAG True NCI_RA007_Epitope_Rep5 654.37007521794 654.36952496793 29.922 1 -0.19500345684250445 0.048482102401449935 0.6054589248567442 ['SNRPN|p.A93S|1|0.16|ENSG00000128739|chr15:24976886-24976886|G/T|missense_variant', 'ENSG00000125835|ENST00000381342|SNRPB', 'nc|ENSG00000125835|P14678|SNRPB', 'ENSG00000128739|ENST00000390687|SNRPN', 'nc|ENSG00000128739|P63162-2|SNRPN', 'nc|ENSG00000125835|P14678-3|SNRPB'] 113601 10317 TLVGNGKV True PC9_epitope_Rep2 786.4599528515 786.45884993586 45.012 2 -0.19500376902198435 0.048482102401449935 0.605459700545759 ['ENST00000253039.8_1_X:24094929-24095118:+|nuORF'] 69821 17640 LVGPVLGAA True PC9_epitope_Rep3 795.4854393233499 795.48489496793 73.043 1 -0.19507578230610978 0.04849640382836539 0.6056385659333525 ['nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 103182 14454 SPIFAGVV True NCI_RA007_Epitope_Rep4 788.4432401581998 788.44269496793 62.95 1 -0.1950799756071986 0.04849640382836539 0.6056489768973741 ['ENST00000520515.5_1_5:133541561-133657575:-|nuORF', 'nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 137112 10227 YARVVGSDAV True PC9_epitope_Rep4 1035.5349086969097 1035.53380993586 47.016 2 -0.1950853683496079 0.04849640382836539 0.6056623650938295 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT'] 70880 15619 LYEEKFESI True PC9_epitope_Rep2 1156.5652057656798 1156.5641099358602 65.355 2 -0.19509406536585425 0.04849640382836539 0.605683954943077 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.D1423Gfs*6|1|0.12|ENSG00000181555|chr3:47120368-47120369|-/C|frameshift_variant'] 56108 10238 LATVTVRP True PC9_epitope_Rep3 855.5178020807899 855.51670993586 44.331 2 -0.19511645574128475 0.04849640382836539 0.6057395284395777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 14040 10273 DRLKLQNEL True PC9_epitope_Rep4 1127.62987171091 1127.6287699358602 47.2 2 -0.19519241574927326 0.04853324272284517 0.6059279629032461 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 67816 21572 LTAEDLFEA True PC9_epitope_Rep5 1007.4811417885498 1007.48004993586 88.016 2 -0.19520988446491958 0.04856916339474479 0.6059712757474486 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 33014 6149 GIGTVPVGR True H1975_Epitope_Rep3 854.4974009893798 854.49630993586 28.662 2 -0.19521264955045256 0.04856916339474479 0.6059781308935595 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 29513 10835 FVFSYGPEK True NCI_RA007_Epitope_Rep5 1072.5229470308798 1072.52184993586 48.312 2 -0.19522676541818867 0.04858712271363044 0.6060131234782773 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'ENST00000479185.1_1_2:218746916-218750490:-|nuORF'] 79103 5560 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 26.217 2 -0.19527582292020082 0.04860508135452452 0.6061346931496827 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 44798 19919 IMPKTGFLI True PC9_epitope_Rep1 1018.5885244928999 1018.58742993586 81.436 2 -0.19530467941556012 0.04862120382778732 0.6062061724001319 ['ENSG00000198681|ENST00000356661|MAGEA1', 'MAGEA1|p.Q187E|1|0.18|ENSG00000198681|chrX:153182948-153182948|C/G|missense_variant', 'ENSG00000197172|ENST00000329342|MAGEA6'] 15657 11945 EATEWIQDP True H1975_Epitope_Rep2 1087.48220441771 1087.48110993586 51.025 2 -0.1953256435115947 0.04862120382778732 0.6062580876812877 ['ENSG00000134256|ENST00000682167|CD101'] 43735 14471 IHETIFNSI True PC9_epitope_Rep1 1072.55530978832 1072.5542099358602 60.487 2 -0.1953561570065672 0.04862120382778732 0.6063336299002123 ['ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 23773 18532 EYGPVYSTW True PC9_epitope_Rep6 1100.48147614172 1100.48097496793 83.926 1 -0.1954011914411578 0.04863916046959345 0.6064450758810422 ['ENSG00000148158|ENST00000374232|SNX30'] 113493 15171 TLTDITVVC True H1975_Epitope_Rep3 963.49468367771 963.4941349679301 63.757 1 -0.19546664615014028 0.04865711643357303 0.6066069583986698 ['ENST00000434365.1_1_X:114937583-114938135:+|nuORF'] 112688 10282 TLGFGTEQAP True H1975_Epitope_Rep2 1019.4923751785899 1019.49126993586 44.556 2 -0.19550121799562334 0.04867507171976446 0.606692414970529 ['ENSG00000157557|ENST00000360938|ETS2'] 134068 11392 VYKKYPNVF True PC9_epitope_Rep1 1156.6280808057597 1156.62643490379 48.699 3 -0.19554507741550128 0.048730772860243465 0.6068007828284027 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 9261 21289 AVPGPGGIWSV True PC9_epitope_Rep3 1038.5498304850598 1038.5487299358601 87.183 2 -0.19557273615830104 0.04874688608741602 0.6068690954542207 ['ENSG00000185085|ENST00000330574|INTS5'] 119339 4757 VAPAPAVVK True NCI_RA007_Epitope_Rep4 850.5276384885 850.52654993586 24.731 2 -0.19559720993171925 0.04874688608741602 0.6069295245619963 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF'] 78930 14278 PAGSFLLT True NCI_RA007_Epitope_Rep5 804.43815477776 804.43760496793 61.614 1 -0.19560242340447515 0.04874688608741602 0.6069423952606328 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 30552 13764 GAGTVLLL True H1975_Epitope_Rep2 742.45889022234 742.4583449679301 58.088 1 -0.19568188267087566 0.04876483798524222 0.6071384688728374 ['nc|ENSG00000204475|O14931-6|NCR3', 'nc|ENSG00000204475|O14931-5|NCR3', 'nc|ENSG00000204475|O14931-4|NCR3', 'nc|ENSG00000204475|O14931-3|NCR3', 'nc|ENSG00000204475|O14931-2|NCR3', 'ENSG00000204475|ENST00000340027|NCR3'] 221 7816 AAFNNRSVL True PC9_epitope_Rep5 990.5246783663799 990.52358993586 35.009 2 -0.19572185012572282 0.04878186861919949 0.6072370283077879 ['ENST00000305641.6_1_15:43621161-43621251:-|nuORF'] 102911 8787 SPASPLSSA True PC9_epitope_Rep4 815.4024975450301 815.40140993586 41.314 2 -0.1957440456824798 0.04878186861919949 0.6072917438118469 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 120468 12928 VEESALPSA True PC9_epitope_Rep2 901.4392769765699 901.43816993586 55.022 2 -0.19576586841514215 0.04879889796765611 0.6073455273178064 ['ENSG00000122299|ENST00000355758|ZC3H7A'] 68194 11834 LTDSWLGTALK True NCI_RA007_Epitope_Rep2 1203.64993844915 1203.6488499358602 50.632 2 -0.19577238417422474 0.04879889796765611 0.6073615833331515 ['nc|ENSG00000158161|Q99504-2|EYA3', 'nc|ENSG00000158161|Q99504-4|EYA3', 'nc|ENSG00000158161|Q99504-5|EYA3', 'nc|ENSG00000158161|Q99504-3|EYA3', 'ENSG00000158161|ENST00000373871|EYA3'] 25556 16285 FEIRDLLPA True H1975_Epitope_Rep2 1072.59169529704 1072.5905899358602 67.855 2 -0.1958427124420832 0.04883571725100955 0.6075348122222995 ['ENSG00000075420|ENST00000415807|FNDC3B'] 49391 4323 KETKLFTA True NCI_RA007_Epitope_Rep3 936.5280324113198 936.52692993586 23.745 2 -0.19593121657553367 0.04887253514482498 0.6077526216595938 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.W489*|1|0.16|ENSG00000081237|chr1:198718109-198718109|G/-|frameshift_variant'] 140270 16488 YRAPEVLL True PC9_epitope_Rep1 959.5440168286299 959.54346496793 68.246 1 -0.19599769008736875 0.048927297771571975 0.6079160747796984 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 108621 7051 SYPRRFSTL True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59143490379 33.747 3 -0.1960338173945847 0.048927297771571975 0.6080048590336088 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 85892 14090 QHFEFEYQT True PC9_epitope_Rep4 1227.5196525555898 1227.5185499358602 62.105 2 -0.19607710858088484 0.04894524321672516 0.6081112024620915 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 85751 18104 QHDFTSQIF True PC9_epitope_Rep3 1121.51417325233 1121.5130699358601 74.832 2 -0.1961556738483145 0.048963187984678955 0.6083040664998972 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 75403 23342 NIVEHRENFG True PC9_epitope_Rep2 1213.5839841476497 1213.58288993586 95.26 2 -0.1962123337211101 0.049 0.6084430533020452 ['nc|ENSG00000172171|Q96QE5-4|TEFM', 'ENSG00000172171|ENST00000581216|TEFM'] 131206 10383 VTEPWFTQRYR True PC9_epitope_Rep5 1481.7415474182098 1481.7399149037901 44.922 3 -0.19625585883492158 0.049017943057678155 0.6085497616971366 ['ENSG00000183665|ENST00000328599|TRMT12', 'ENST00000521443.1_1_8:125463141-125474348:+|nuORF'] 23917 9369 EYLDRAEKL True PC9_epitope_Rep2 1135.5873381925899 1135.58569490379 41.372 3 -0.19634501411212027 0.049031260022261214 0.6087681797464537 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B'] 107825 7474 SVVCVCVKL True PC9_epitope_Rep2 948.5136453004799 948.51254993586 34.12 2 -0.1964115933516654 0.049031260022261214 0.6089311497124361 ['ENST00000483060.1_1_1:67091531-67109432:+|nuORF'] 46582 7418 ITAPPGTAA True PC9_epitope_Rep4 797.42831837005 797.4272299358599 35.881 2 -0.19644010208729565 0.049031260022261214 0.6090008956480487 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 127662 8620 VPAGGAVAV True PC9_epitope_Rep6 739.42283906679 739.42229496793 42.974 1 -0.19645014709363973 0.049031260022261214 0.6090254652858355 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 76735 18732 NQVALPNI True PC9_epitope_Rep5 867.48141657207 867.48030993586 77.067 2 -0.19648407942726148 0.049031260022261214 0.6091084421126866 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 57176 7619 LDVDNDRTTP True PC9_epitope_Rep1 1144.53603089572 1144.5349299358602 34.126 2 -0.19653855571821505 0.049031260022261214 0.6092415913062561 ['ENSG00000164741|ENST00000276297|DLC1', 'nc|ENSG00000164741|Q96QB1-4|DLC1', 'nc|ENSG00000164741|Q96QB1-1|DLC1', 'nc|ENSG00000164741|Q96QB1-6|DLC1'] 97126 13638 SDLPSDFSI True NCI_RA007_Epitope_Rep3 979.4498416602701 979.44874993586 60.948 2 -0.1966121182015983 0.04906343727010356 0.6094212631322008 ['ENSG00000166164|ENST00000394688|BRD7', 'nc|ENSG00000166164|Q9NPI1-2|BRD7', 'BRD7|p.E435K|1|0.15|ENSG00000166164|chr16:50325776-50325776|C/T|missense_variant'] 39488 2746 HLDQSQKSLY True H1975_Epitope_Rep2 1217.60405088589 1217.6029499358601 14.599 2 -0.19662773992842 0.04906343727010356 0.6094593994135049 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 10945 6853 DAGDPAVEA True H1975_Epitope_Rep3 843.36102665587 843.36047496793 31.319 1 -0.19663872629393578 0.04906343727010356 0.6094862157461856 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000570116.6_1_16:89971082-89977643:+|nuORF', 'ENST00000563484.1_1_16:89971421-89975542:+|nuORF'] 5286 12542 ALQEMVHQV True PC9_epitope_Rep3 1053.52771514149 1053.52660993586 53.265 2 -0.19666762313867073 0.04906343727010356 0.6095567337270896 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 56828 10202 LDNQIKKDLA True NCI_RA007_Epitope_Rep1 1156.64518742188 1156.6440899358602 43.695 2 -0.19667040121473972 0.04906343727010356 0.6095635119742344 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 99959 12864 SINSHATEWSP True H1975_Epitope_Rep2 1227.55201531303 1227.55090993586 54.594 2 -0.19669436241894755 0.04906343727010356 0.6096219664251679 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 67790 20767 LSYWHCSWAK True PC9_epitope_Rep3 1279.58081334351 1279.5797099358601 85.151 2 -0.1967677288631438 0.04910023767306749 0.6098008507119949 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 43085 14194 IEVQSNSL True PC9_epitope_Rep1 888.4552613938799 888.45416993586 59.42 2 -0.1968279832116818 0.049114468398121426 0.609947655867176 ['ENSG00000099219|ENST00000339450|ERMP1', 'ENST00000475005.1_1_9:5812814-5833063:-|nuORF', 'ENST00000214893.9_1_9:5823966-5832826:-|nuORF'] 45269 19326 IPVMLTGP True PC9_epitope_Rep1 826.46226135062 826.46116993586 79.143 2 -0.1968701993340276 0.049114468398121426 0.6100504537719931 ['ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'CACNA1B|p.E1102Kfs*15|1|0.34|ENSG00000148408|chr9:138043790-138043790|G/-|frameshift_variant'] 136650 6826 WWRRRWTRSQW True H1975_Epitope_Rep3 1702.8705449554998 1702.86944993586 31.212 2 -0.1969343112794402 0.049114468398121426 0.6102064766944423 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 92081 4760 RKVSINNTGL True NCI_RA007_Epitope_Rep3 1100.63020606408 1100.62910993586 25.683 2 -0.19697334162984934 0.049114468398121426 0.6103014065767499 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 27289 6387 FLQVTATDA True NCI_RA007_Epitope_Rep3 964.48656152216 964.48546993586 32.127 2 -0.19701324061225362 0.049114468398121426 0.6103984065637209 ['ENSG00000166341|ENST00000299441|DCHS1'] 85256 15488 QEQGDAPAILF True H1975_Epitope_Rep3 1187.5822528121496 1187.5811499358601 64.991 2 -0.1970803531602352 0.0491324028668427 0.6105614693870117 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 92746 6043 RPAAGFVA True PC9_epitope_Rep2 787.4340724568299 787.43296993586 28.636 2 -0.1970978681233356 0.04914848273390793 0.6106040053038494 ['ENSG00000141526|ENST00000582743|SLC16A3'] 136651 7159 WWRRRWTRSQW True NCI_RA007_Epitope_Rep1 1702.8705449554998 1702.86944993586 31.836 2 -0.19710411935113548 0.04914848273390793 0.6106191846966796 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 33002 8146 GIGICYAVCK True NCI_RA007_Epitope_Rep3 1025.5038088927697 1025.5027099358601 39.155 2 -0.19713750586807388 0.04914848273390793 0.6107002367970166 ['MSH4|p.E779K|1|0.19|ENSG00000057468|chr1:75890804-75890804|G/A|missense_variant'] 75236 14787 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.48937496793 62.258 1 -0.19717952586058238 0.049164560781503414 0.6108022054287697 ['ENSG00000116285|ENST00000377482|ERRFI1'] 59178 22411 LFCCGAGFFI True PC9_epitope_Rep2 1076.4823451721998 1076.4812499358602 91.698 2 -0.19718002996241368 0.049164560781503414 0.6108034284272487 ['EGFR-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'ZNF679-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 5774 11596 APDASTWP True PC9_epitope_Rep1 843.37628279719 843.37518993586 49.481 2 -0.1971908328529406 0.049164560781503414 0.6108296356035168 ['ENST00000509525.5_1_5:132534789-132560973:-|nuORF'] 109714 7502 TEDNDDDLYG True NCI_RA007_Epitope_Rep3 1155.4203920067898 1155.4192899358602 36.631 2 -0.19724007952097522 0.049220208572991114 0.6109490651057512 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 92809 6634 RPAPPAQSL True PC9_epitope_Rep3 935.5188647099499 935.51776993586 30.54 2 -0.1973580639247723 0.049275854265670965 0.6112349254422786 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 27403 19459 FLWHNMKLP True PC9_epitope_Rep2 1184.6164705762399 1184.6153699358601 80.23 2 -0.19739501700210849 0.049289135271712484 0.6113243802828235 ['ENSG00000183751|ENST00000568546|TBL3'] 92755 5542 RPAAGFVA True PC9_epitope_Rep6 787.4340724568299 787.43296993586 29.335 2 -0.1974007922047701 0.049289135271712484 0.6113383573703158 ['ENSG00000141526|ENST00000582743|SLC16A3'] 79125 5387 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 27.45 2 -0.19742722549539546 0.049289135271712484 0.6114023194293272 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 46301 12163 ISQEQVTV True PC9_epitope_Rep6 902.4709114580199 902.46980993586 58.142 2 -0.19744180575450176 0.049289135271712484 0.6114375919730949 ['ENST00000558287.1_1_15:63632408-63634218:-|nuORF'] 70932 20842 LYGAPGVEF True PC9_epitope_Rep1 951.4701831820299 951.46963496793 84.996 1 -0.19747979625738962 0.049289135271712484 0.6115294715083452 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 23811 8305 EYHKWRIYYKK True NCI_RA007_Epitope_Rep2 1612.8514322203598 1612.84978490379 36.944 3 -0.19750467579286768 0.049289135271712484 0.6115896211616443 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL', 'MLXIPL|p.P412Hfs*61|1|0.5|ENSG00000009950|chr7:73597550-73597550|G/-|frameshift_variant'] 33523 20231 GLDSQFVEV True PC9_epitope_Rep5 992.4814761417199 992.48092496793 82.866 1 -0.1976048253605747 0.049325916847364946 0.6118315767727431 ['ENSG00000131389|ENST00000622186|SLC6A6'] 26821 14313 FLAQPVTL True H1975_Epitope_Rep2 887.5116540711899 887.51054993586 60.204 2 -0.19772970344267318 0.04936269703597557 0.612132894457922 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1'] 37681 6147 GVYGSFASK True NCI_RA007_Epitope_Rep3 914.4497820906199 914.44868993586 31.173 2 -0.19774147405423756 0.04937875902637682 0.6121612739178607 ['ENSG00000155096|ENST00000337198|AZIN1'] 137652 8301 YEIGHTWHP True H1975_Epitope_Rep2 1138.5195929859399 1138.51795490379 36.882 3 -0.19776359977507124 0.04937875902637682 0.6122146098390171 ['ENST00000529023.5_1_11:86749009-86868454:+|nuORF', 'nc|ENSG00000166575|Q86UB9-2|TMEM135', 'ENSG00000166575|ENST00000305494|TMEM135'] 87802 16181 QRDSLLWKL True PC9_epitope_Rep4 1157.6556925359298 1157.65405490379 70.185 3 -0.1977701197926981 0.04937875902637682 0.6122303243624436 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 99875 23827 SILQTLILV True PC9_epitope_Rep5 998.6375828602999 998.63648993586 96.632 2 -0.19785239720716274 0.04940528924996701 0.6124285301031347 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 139599 18600 YLYARLRGVP True PC9_epitope_Rep1 1206.6873270173799 1206.6862299358602 76.332 2 -0.19786164160464653 0.04940528924996701 0.6124507883302546 ['ENSG00000198691|ENST00000370225|ABCA4'] 118378 19390 TYNSNLFFW True NCI_RA007_Epitope_Rep3 1190.53965972418 1190.53856993586 84.624 2 -0.19787503007750515 0.04940528924996701 0.6124830203615308 ['CPVL|p.L318Afs*6|1|0.28|ENSG00000106066|chr7:29066033-29066034|AA/-|frameshift_variant', 'CPVL|p.L381*|1|0.07|ENSG00000106066|chr7:29030756-29030756|G/-|frameshift_variant', 'CPVL|p.I382Sfs*14|1|0.07|ENSG00000106066|chr7:29030754-29030754|C/-|frameshift_variant', 'ENSG00000106066|ENST00000265394|CPVL'] 103123 5438 SPHPGLVAA True PC9_epitope_Rep6 847.4552018242299 847.45410993586 28.835 2 -0.19789714068625985 0.04940528924996701 0.6125362398308033 ['ENSG00000100393|ENST00000263253|EP300'] 24560 17185 FAGMPITL True H1975_Epitope_Rep2 848.44661128648 848.44550993586 71.391 2 -0.19791018061948404 0.04940528924996701 0.6125676202864317 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 107952 8348 SVYDGHGGEEV True PC9_epitope_Rep5 1147.47818166643 1147.47708993586 37.051 2 -0.19795194713244998 0.04940528924996701 0.6126680999155261 ['ENSG00000115241|ENST00000344034|PPM1G'] 101203 11494 SLHDPVSI True PC9_epitope_Rep2 866.44978209062 866.44868993586 49.535 2 -0.1979541567791231 0.04940528924996701 0.6126734144475349 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 43915 16093 IIAPMMLVNL True PC9_epitope_Rep3 1113.62900940589 1113.62790993586 67.051 2 -0.19798003181574642 0.04940528924996701 0.6127356379456643 ['OR5D16|p.L100Ffs*14|1|0.43|ENSG00000205029|chr11:55839047-55839048|-/T|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16'] 23645 14368 EWTEDDELP True NCI_RA007_Epitope_Rep5 1132.4560492395199 1132.4549499358602 61.952 2 -0.19800181346184492 0.04940528924996701 0.6127880037127097 ['ENSG00000124743|ENST00000370905|KLHL31', 'KLHL31|p.E602K|1|0.12|ENSG00000124743|chr6:53651699-53651699|C/T|missense_variant'] 62396 7922 LLGSAHEV True PC9_epitope_Rep5 824.4392174069201 824.43812993586 35.412 2 -0.1980106261970759 0.04940528924996701 0.6128091869616774 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 56112 10055 LATVTVRP True PC9_epitope_Rep5 855.5178020807899 855.51670993586 43.656 2 -0.19805174839268858 0.04940528924996701 0.6129080049073442 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 69820 17307 LVGPVLGAA True PC9_epitope_Rep2 795.4854393233499 795.48489496793 71.831 1 -0.19807801580986523 0.04940528924996701 0.6129711023496764 ['nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 87282 13883 QPQLPYSQA True PC9_epitope_Rep1 1030.5083595959 1030.5072699358602 58.24 2 -0.19813331128856426 0.049423207419135945 0.6131038674810094 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 74363 4944 NEQYQKLT True H1975_Epitope_Rep1 1022.5032742154599 1022.50216993586 24.093 2 -0.1982367853150096 0.049459973988275875 0.6133520871368059 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35'] 72906 17143 MPTLPPPSV True PC9_epitope_Rep6 937.49428975489 937.49318993586 78.526 2 -0.19825891959157946 0.04947416035282144 0.6134051464530567 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 87391 9487 QPVLSQTEA True PC9_epitope_Rep1 971.4923751785899 971.49126993586 41.348 2 -0.1982685851508459 0.04947416035282144 0.6134283121387853 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF', 'ENST00000493673.1_1_1:151373717-151374107:+|nuORF'] 128401 5001 VPRPETAVA True PC9_epitope_Rep6 938.5185303567798 938.51742993586 26.844 2 -0.1982950373262596 0.04947416035282144 0.6134916977656868 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 107543 15158 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 70.381 2 -0.19833507865290861 0.04947416035282144 0.6135876100775403 ['ENSG00000073756|ENST00000367468|PTGS2'] 57362 11543 LEAIGLGT True H1975_Epitope_Rep2 772.4330693973201 772.43252496793 49.461 1 -0.19835227486475776 0.04947416035282144 0.6136287873801953 ['TACC2|p.M2621I|1|0.21|ENSG00000138162|chr10:122227975-122227975|G/T|missense_variant'] 83226 7425 PSVPVRAP True PC9_epitope_Rep2 821.47593726881 821.47484993586 33.936 2 -0.19841619557210183 0.049491142103279304 0.6137817787922752 ['ENST00000353258.7_1_16:19533228-19533372:-|nuORF'] 89591 6621 QYNPVKQQL True NCI_RA007_Epitope_Rep3 1116.5927579262 1116.5916699358602 33.104 2 -0.19841744317403423 0.049491142103279304 0.6137847637698076 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 31488 5028 GEASPPAPP True NCI_RA007_Epitope_Rep3 821.3919328613299 821.39082993586 26.773 2 -0.1984981143971758 0.049526968451999547 0.6139776858209461 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 77727 12195 NTLGVTVLS True PC9_epitope_Rep6 902.50729696674 902.50618993586 58.273 2 -0.1985369530994411 0.049526968451999547 0.6140705040646041 ['ENSG00000100104|ENST00000215917|SRRD'] 495 4379 AAPAAAAAAA True PC9_epitope_Rep4 754.3973525949399 754.3962499358599 23.287 2 -0.1985974192081948 0.04956372613685619 0.6142149268406671 ['ENST00000525718.5_1_11:832961-833994:+|nuORF', 'ENST00000530155.5_1_11:832961-836303:+|nuORF', 'ENST00000280481.8_1_13:39261339-39261684:+|nuORF', 'nc|ENSG00000169181|Q6UXU4-3|GSG1L', 'ENSG00000169181|ENST00000447459|GSG1L', 'ENSG00000131668|ENST00000253968|BARX1'] 84144 11342 PYERPPFAQI True NCI_RA007_Epitope_Rep4 1216.6240580544797 1216.62296993586 50.531 2 -0.19861589533917173 0.049580702911523604 0.6142590371241866 ['ENSG00000066056|ENST00000372476|TIE1'] 81729 18860 PLPAIVPAA True PC9_epitope_Rep5 847.51673945163 847.51564993586 77.562 2 -0.19861814666544855 0.049580702911523604 0.6142644113520848 ['ENST00000521856.1_1_8:55013466-55014395:-|nuORF', 'ENST00000517297.5_1_8:54967680-55014407:-|nuORF', 'ENST00000519926.5_1_8:54966225-55014407:-|nuORF', 'nc|ENSG00000120992|O75608-2|LYPLA1', 'ENSG00000120992|ENST00000316963|LYPLA1'] 65385 10599 LREERAYIL True PC9_epitope_Rep2 1161.6506071554898 1161.6495099358601 46.085 2 -0.19862888192272962 0.04959861304790261 0.6142900360070894 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 57731 20448 LEELTGFTELF True PC9_epitope_Rep2 1297.64418436237 1297.6430899358602 84.082 2 -0.1987015188906713 0.049672118790985154 0.6144633355155479 ['MKI67|p.R1836T|1|0.1|ENSG00000148773|chr10:128106333-128106333|C/G|missense_variant'] 41643 18652 IAEQYESYYDY True H1975_Epitope_Rep2 1442.58779168506 1442.58668993586 77.413 2 -0.19877161834342522 0.049672118790985154 0.6146304451163451 ['DOCK4|p.L1501*|1|0.32|ENSG00000128512|chr7:111747332-111747332|G/-|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 23271 8753 EVPQASQVPPP True NCI_RA007_Epitope_Rep3 1147.5873381925899 1147.58624993586 41.52 2 -0.19879654424501123 0.04968908988128887 0.6146898336442016 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 79152 8113 PALVEQTAA True PC9_epitope_Rep6 898.47599683846 898.47488993586 40.74 2 -0.19880175400458877 0.04968908988128887 0.6147022443013911 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'ENSG00000163349|ENST00000426820|HIPK1', 'HIPK1|p.V768Gfs*25|1|0.26|ENSG00000163349|chr1:113966189-113966190|-/G|frameshift_variant', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 2520 17573 AEQPPPPPLWI True H1975_Epitope_Rep2 1243.6601092100298 1243.65900993586 72.906 2 -0.1988891525926011 0.049724902019897495 0.6149103347805664 ['ENSG00000135045|ENST00000376854|C9orf40'] 137628 5970 YEGPPDDEA True H1975_Epitope_Rep2 991.3770706428298 991.37596993586 27.943 2 -0.19889923706310725 0.049724902019897495 0.6149343319144043 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 118579 21865 TYQVLAVTF True PC9_epitope_Rep2 1040.5542471591598 1040.55367496793 89.579 1 -0.19897040814535008 0.04974280707704482 0.6151036129876994 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 17561 11397 EHGPENIVM True PC9_epitope_Rep5 1024.46478053176 1024.4636899358602 48.836 2 -0.19899183541712226 0.04976071145947168 0.6151545510035685 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 107626 21077 SVPVIIAAV True PC9_epitope_Rep5 867.5429541994699 867.5424049679301 86.133 1 -0.19907316635233632 0.04977767729293843 0.6153477815821657 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 121471 9756 VEYEVPEA True NCI_RA007_Epitope_Rep4 934.4283779396998 934.4278249679301 44.375 1 -0.1990985731669782 0.04977767729293843 0.615408107674151 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 12307 9599 DIPAKGPNI True NCI_RA007_Epitope_Rep1 923.5076313199099 923.50652993586 41.335 2 -0.1991551251051795 0.04981348204529183 0.6155423219671092 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 28136 17926 FRDAFTQEL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 74.157 2 -0.19917552327379187 0.04981348204529183 0.6155907114634599 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 6590 16108 APVPGIPTA True PC9_epitope_Rep1 821.46470387877 821.46360993586 66.776 2 -0.19924866045948111 0.04982856712256509 0.6157641179918784 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 128793 16195 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 74.648 2 -0.1992949872590905 0.04982856712256509 0.6158738825298392 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 137862 9560 YESSTASALVA True NCI_RA007_Epitope_Rep2 1097.52406922969 1097.52347496793 41.8 1 -0.19930647880039357 0.04982856712256509 0.6159011010177847 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 77984 15733 NVPDSFNEV True PC9_epitope_Rep4 1019.45598966987 1019.4554749679301 68.442 1 -0.19931432939004853 0.04982856712256509 0.6159196936034672 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 112213 24879 TKKRKRRRRRS True PC9_epitope_Rep2 1526.9818267399799 1526.9807299358602 101.37 2 -0.19934149843561286 0.049846466853795 0.6159840252421018 ['nc|ENSG00000028310|Q9H8M2-6|BRD9', 'ENST00000467963.5_3_5:889215-891867:-|nuORF'] 23774 20090 EYGSIIAFF True NCI_RA007_Epitope_Rep3 1045.51204799401 1045.5114749679299 87.546 1 -0.19937141677859335 0.04986248728478318 0.6160548435330491 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 49227 6473 KENSHFFVA True H1975_Epitope_Rep2 1077.5243440132099 1077.5232499358601 29.815 2 -0.1994024753119071 0.04986248728478318 0.6161283349744905 ['ENSG00000124659|ENST00000372876|TBCC'] 32207 5786 GEYDKAIQA True NCI_RA007_Epitope_Rep4 993.4767251144498 993.47562993586 28.878 2 -0.19940840890344919 0.04986248728478318 0.616142372196796 ['ENSG00000198677|ENST00000358746|SKIC3'] 81925 7888 PLSPEEECR True NCI_RA007_Epitope_Rep2 1058.47025983502 1058.46916993586 35.314 2 -0.19951110572462538 0.04991805903516869 0.6163851725839835 ['ENST00000377735.7_1_19:46286802-46287057:-|nuORF'] 79751 12872 PEALEAQV True PC9_epitope_Rep6 855.4337976733099 855.43324496793 61.031 1 -0.19962385877099245 0.049972687374032286 0.616651418097097 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 46579 7659 ITAPPGTAA True PC9_epitope_Rep2 797.42831837005 797.4272299358599 34.83 2 -0.19963327222026572 0.049972687374032286 0.6166736305846978 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 58599 9523 LEQRRGFL True PC9_epitope_Rep2 1017.5719629119698 1017.57086993586 41.978 2 -0.19967874035940222 0.05000941796948578 0.6167808857514357 ['ENST00000579023.5_1_17:73127274-73127802:-|nuORF', 'nc|ENSG00000125458|Q8TCD5-2|NT5C', 'ENSG00000125458|ENST00000245552|NT5C', 'ENST00000583655.5_1_17:73127559-73127802:-|nuORF'] 28414 16140 FSAFGNYDP True PC9_epitope_Rep1 1016.4239612655999 1016.42286993586 66.897 2 -0.1997228485965195 0.050027311597069184 0.6168848793067169 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'CD109|p.G972V|1|0.29|ENSG00000156535|chr6:73803256-73803256|G/T|missense_variant', 'ENST00000474094.1_1_6:74502386-74513776:+|nuORF'] 136967 7256 YAHPSGTAL True PC9_epitope_Rep1 915.4450310633499 915.44392993586 32.723 2 -0.1997677760244138 0.05004426195543669 0.6169907498611771 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'AFAP1|p.G490V|1|0.32|ENSG00000196526|chr4:7786255-7786255|C/A|missense_variant'] 27683 23930 FPILYWFYQE True H1975_Epitope_Rep1 1404.675424921 1404.6743299358602 99.325 2 -0.19980127283459065 0.05004426195543669 0.6170696486744893 ['FCRL3|p.H512Q|1|0.42|ENSG00000160856|chr1:157690409-157690409|G/C|missense_variant'] 137718 8571 YELRAPVA True H1975_Epitope_Rep2 917.4970666362098 917.49596993586 37.921 2 -0.1998448257778396 0.050080988435604774 0.617172188190332 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1'] 11216 5095 DEDKEKTFEEK True NCI_RA007_Epitope_Rep2 1396.6358045066397 1396.6347099358602 24.442 2 -0.19994255799557506 0.05019021432069005 0.6174020976612142 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 107954 7649 SVYDHQGIFK True NCI_RA007_Epitope_Rep4 1192.58767254576 1192.58602490379 36.077 3 -0.1999501900868488 0.05019021432069005 0.6174200407818019 ['ENSG00000153989|ENST00000368494|NUS1'] 95879 16222 RYLDGWNAIF True NCI_RA007_Epitope_Rep3 1253.61930702721 1253.61820993586 71.499 2 -0.1999658626912713 0.05019021432069005 0.6174568822579337 ['ENST00000466602.1_1_2:219677084-219677513:+|nuORF', 'ENST00000494263.5_1_2:219646839-219678911:+|nuORF', 'ENSG00000135929|ENST00000258415|CYP27A1'] 60815 14435 LHTANCFLYL True H1975_Epitope_Rep2 1193.5903153980498 1193.58920993586 60.677 2 -0.19997007122357952 0.05019021432069005 0.6174667740856512 ['CFTR|p.W1089C|1|0.1|ENSG00000001626|chr7:117611708-117611708|G/C|missense_variant'] 125146 14722 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 61.849 1 -0.20002806938826914 0.050207156308851225 0.6176030451743364 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 47523 7551 IVSEKSRYSL True H1975_Epitope_Rep1 1180.6451874218799 1180.6440899358602 34.037 2 -0.2000588691521091 0.050207156308851225 0.6176753743461676 ['ENSG00000163686|ENST00000478253|ABHD6'] 101186 5143 SLGYFSPAP True H1975_Epitope_Rep2 937.4545331178898 937.45342993586 24.859 2 -0.20011436354542372 0.05024387487994576 0.6178056304301629 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1'] 105827 16973 SSLLPKEIV True PC9_epitope_Rep3 984.58554728744 984.58444993586 70.447 2 -0.20018996662178876 0.05028059206809536 0.6179829506168122 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 16950 16049 EFSHKELFDFY True H1975_Epitope_Rep2 1460.6612314088397 1460.6601299358601 66.933 2 -0.2002240805099973 0.05031636034950286 0.6180629107248974 ['ENSG00000145781|ENST00000274458|COMMD10'] 114856 14779 TQNPNYYNL True PC9_epitope_Rep4 1125.5090878718902 1125.50798993586 64.778 2 -0.20024911117522567 0.05031636034950286 0.6181215603681819 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 114448 15566 TPVLSELP True H1975_Epitope_Rep1 854.4749342093 854.4743849679301 65.156 1 -0.200255100434431 0.050334243479898316 0.6181355913426572 ['nc|ENSG00000106624|Q8IUX7-2|AEBP1', 'ENSG00000106624|ENST00000223357|AEBP1'] 79121 5049 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 26.058 2 -0.2002716531150003 0.05034738566398674 0.6181743640547509 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 124834 16030 VHKCWNGLS True PC9_epitope_Rep5 1042.50183474682 1042.5007299358601 66.648 2 -0.20027853057873188 0.05034738566398674 0.6181904715134198 ['ENST00000415814.6_2_3:17550096-17784135:-|nuORF'] 94511 24101 RRRRRWWSVTW True PC9_epitope_Rep5 1643.9021794369498 1643.90108993586 97.688 2 -0.200282694218448 0.05034738566398674 0.618200222397475 ['ENST00000380486.3_2_21:43339056-43362335:-|nuORF'] 42220 10953 IDSFDRRIL True PC9_epitope_Rep1 1133.61930702721 1133.61766490379 47.018 3 -0.20029123804593352 0.05034738566398674 0.6182202298246722 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 54771 16245 KYNANFVTF True PC9_epitope_Rep4 1102.54474510462 1102.5441749679298 70.428 1 -0.20034576226726472 0.05034738566398674 0.6183478645990224 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF'] 42685 15746 IEIPSVVSV True H1975_Epitope_Rep3 941.54334812229 941.54279496793 66.01 1 -0.20036679961591786 0.05034738566398674 0.6183970889147901 ['ZBTB20|p.I383*|1|0.24|ENSG00000181722|chr3:114350932-114350932|G/-|frameshift_variant', 'nc|ENSG00000181722|Q9HC78-2|ZBTB20', 'ZBTB20|p.P692Lfs*43|1|0.14|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant', 'ENSG00000181722|ENST00000675478|ZBTB20'] 82300 4369 PPHPPPPPP True NCI_RA007_Epitope_Rep4 931.49158733295 931.49048993586 23.154 2 -0.20048049371017476 0.05038124823496187 0.6186629079247258 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 134685 17448 VYTFGLGQF True NCI_RA007_Epitope_Rep3 1030.5123823471797 1030.51128993586 76.551 2 -0.20053365993528038 0.05038124823496187 0.618787090821072 ['nc|ENSG00000156313|Q92834-5|RPGR', 'nc|ENSG00000156313|Q92834-3|RPGR', 'nc|ENSG00000156313|Q92834-4|RPGR', 'nc|ENSG00000156313|Q92834-2|RPGR', 'nc|ENSG00000156313|Q92834|RPGR', 'ENSG00000156313|ENST00000645032|RPGR'] 2148 6668 AELPSSTPA True H1975_Epitope_Rep2 871.42871229287 871.42816496793 30.556 1 -0.20053977085932947 0.05038124823496187 0.6188013594669015 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 59873 13329 LGGALSWE True H1975_Epitope_Rep1 831.41266830591 831.41211496793 56.375 1 -0.20054957689361405 0.05038124823496187 0.6188242538511983 ['ENST00000371717.7_1_9:139317959-139318130:+|nuORF'] 58824 6161 LESQKRLYEKN True NCI_RA007_Epitope_Rep1 1406.7517777487399 1406.75014490379 28.002 3 -0.20060387315052802 0.05041795315912343 0.6189509732386217 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 32237 8116 GEYKIMVA True NCI_RA007_Epitope_Rep3 909.4629896266099 909.46188993586 39.029 2 -0.20069864658222064 0.0505092339840735 0.6191719679532949 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 35343 8339 GRTEALELAP True NCI_RA007_Epitope_Rep4 1055.56112344475 1055.56002993586 38.891 2 -0.20070641768017888 0.0505092339840735 0.6191900779138373 ['ENST00000339007.3_1_19:18508083-18508422:-|nuORF'] 121898 24256 VFQWSFSALLI True PC9_epitope_Rep1 1309.7070594024499 1309.7059699358601 98.12 2 -0.20071816362571446 0.0505092339840735 0.6192174478363344 ['ENSG00000147160|ENST00000276101|AWAT2'] 76920 17140 NRDPILVSL True PC9_epitope_Rep4 1025.58694426977 1025.58637496793 73.934 1 -0.20073158710750955 0.0505252061292873 0.6192487220840572 ['ENSG00000106789|ENST00000375077|CORO2A'] 10936 15834 DAFEHIVTQF True NCI_RA007_Epitope_Rep1 1205.57168812845 1205.5705899358602 65.689 2 -0.20075028549480883 0.0505252061292873 0.6192922777130774 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF'] 92245 4011 RLKKKKKKRKE True PC9_epitope_Rep5 1469.0041848939998 1469.00308993586 20.505 2 -0.20078715240892828 0.0505252061292873 0.6193781268256894 ['AluJb_dup107864|chr17:42999154-42999315:-|5.3964784527216985|0.0002278324850216|14.53|541.0|4|2|sense'] 107663 4803 SVQRRSPEAL True NCI_RA007_Epitope_Rep3 1141.6203696563698 1141.61872490379 25.859 3 -0.20080384645137422 0.05054307926886659 0.6194169887644755 ['ENST00000571306.1_1_17:1057467-1057878:-|nuORF'] 83291 9185 PTDENLLKY True H1975_Epitope_Rep1 1091.54989005471 1091.5487899358602 40.237 2 -0.20084550502030848 0.05059669465045364 0.6195139323315825 ['ENSG00000137547|ENST00000260102|MRPL15'] 17001 4250 EGARAPQSI True PC9_epitope_Rep6 927.47739382079 927.47628993586 23.345 2 -0.20085413200098917 0.05059669465045364 0.6195340022511221 ['ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A', 'ENST00000475339.1_1_2:220085171-220086945:-|nuORF'] 110701 8332 TGEISTKRALD True H1975_Epitope_Rep1 1189.63026563373 1189.62916993586 36.98 2 -0.20085937551871466 0.05059669465045364 0.6195461998479795 ['PCDHA11|p.T633K|1|0.17|ENSG00000249158|chr5:140871001-140871001|C/A|missense_variant'] 35641 8005 GTDHLPVLFK True NCI_RA007_Epitope_Rep4 1125.61824439805 1125.6166049037902 37.559 3 -0.2008954502282031 0.0506474441014831 0.6196300974003643 ['ENSG00000181378|ENST00000341552|CFAP65'] 108515 17621 SYMLVNENRF True PC9_epitope_Rep1 1271.5968573304701 1271.59522490379 72.571 3 -0.20093132745588324 0.0506474441014831 0.6197135005132759 ['ENSG00000182195|ENST00000370526|LDOC1'] 27228 21549 FLPAGIVAV True PC9_epitope_Rep3 885.53238951577 885.53128993586 88.183 2 -0.20093572126143938 0.0506474441014831 0.6197237122996343 ['nc|ENSG00000122882|O95905-2|ECD', 'ENSG00000122882|ENST00000372979|ECD', 'nc|ENSG00000122882|O95905-3|ECD'] 33823 9974 GLNDILVK True H1975_Epitope_Rep1 870.51746772762 870.51636993586 43.302 2 -0.20095377010483523 0.0506474441014831 0.6197656546854479 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 106855 14307 SVASTITGV True PC9_epitope_Rep4 833.44944773745 833.44834993586 62.931 2 -0.20096737809676105 0.0506474441014831 0.6197972714331755 ['ENSG00000147872|ENST00000276914|PLIN2'] 30422 11343 GAERITDVAL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 54.67 2 -0.20096978874267807 0.0506474441014831 0.6198028717910923 ['ENST00000473604.2_1_9:132580793-132585603:-|nuORF', 'ENSG00000136827|ENST00000351698|TOR1A'] 56103 6860 LATVTVRP True NCI_RA007_Epitope_Rep3 855.5178020807899 855.51670993586 34.094 2 -0.20104929282215828 0.05066531157660964 0.6199874851420378 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 59226 6867 LFEQQRQRAD True NCI_RA007_Epitope_Rep3 1289.64764703337 1289.64601490379 34.119 3 -0.20106054816561686 0.05067936316760134 0.6200136068229612 ['nc|ENSG00000166317|Q9H987-2|SYNPO2L', 'ENSG00000166317|ENST00000394810|SYNPO2L'] 93415 12081 RQERRQMK True PC9_epitope_Rep5 1130.6090937800197 1130.60743490379 51.464 3 -0.2010673258499375 0.05067936316760134 0.6200293349760271 ['ENST00000562235.5_1_16:67262534-67263013:+|nuORF', 'ENST00000563271.5_1_16:67262538-67263013:+|nuORF', 'ENST00000567193.5_1_16:67262538-67263013:+|nuORF', 'ENSG00000168701|ENST00000304800|TMEM208'] 142768 18559 YYQSSVQYL True PC9_epitope_Rep5 1149.5342399905699 1149.53367496793 76.411 1 -0.20107136857328317 0.05067936316760134 0.6200387158396278 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 128649 7629 VPVHDIYVSQ True NCI_RA007_Epitope_Rep3 1155.59242357303 1155.5913299358601 37.136 2 -0.201093870443988 0.05067936316760134 0.6200909217567099 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 41583 17172 IAAGIFNDL True NCI_RA007_Epitope_Rep1 932.4967322830399 932.49618496793 70.928 1 -0.2011299246891134 0.05067936316760134 0.6201745413670677 ['ENSG00000136930|ENST00000259457|PSMB7'] 120460 19090 VEERNLLSV True PC9_epitope_Rep3 1057.57677350889 1057.57566993586 78.653 2 -0.20117117359699427 0.05072818274188086 0.6202701653670859 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 98902 19649 SGYPGLLNGV True PC9_epitope_Rep4 975.5025459394699 975.50144993586 83.698 2 -0.20118435186657005 0.05072818274188086 0.6203007057079972 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 117381 13277 TVPKPDVVVQV True PC9_epitope_Rep6 1179.68632395787 1179.6852299358602 62.721 2 -0.20119680665160644 0.05072818274188086 0.6203295650396036 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 54431 16399 KYFLWVVKF True NCI_RA007_Epitope_Rep2 1228.7008518231999 1228.6997499358602 68.516 2 -0.20121461450934347 0.05072818274188086 0.6203708207824783 ['nc|ENSG00000177885|P62993-2|GRB2', 'ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'ENSG00000177885|ENST00000316804|GRB2'] 69930 10318 LVKHWYQQRAR True H1975_Epitope_Rep1 1483.8160497711501 1483.81441490379 44.635 3 -0.2012845417028704 0.05072818274188086 0.6205327386032273 ['nc|ENSG00000135114|Q15646-3|OASL'] 53983 8471 KVASLLHQV True PC9_epitope_Rep2 993.5971150306501 993.59600993586 37.95 2 -0.20130627022541067 0.05072818274188086 0.6205830242933005 ['ENST00000502256.1_1_4:2743986-2746461:-|nuORF', 'ENST00000505186.1_1_4:2743986-2747794:-|nuORF', 'nc|ENSG00000168884|Q8NFZ5-2|TNIP2', 'ENSG00000168884|ENST00000315423|TNIP2'] 52929 9645 KPGKPRKRKKR True NCI_RA007_Epitope_Rep5 1377.9157042427698 1377.91405490379 43.737 3 -0.20132547594985983 0.05072818274188086 0.6206274608306939 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 4174 11865 AHVDLIEKL True PC9_epitope_Rep6 1036.59169529704 1036.5905899358602 56.854 2 -0.20138392252753456 0.05072818274188086 0.6207626275922764 ['ENSG00000177700|ENST00000322028|POLR2L'] 8910 9247 AVFPSIVGRPR True NCI_RA007_Epitope_Rep4 1197.69822605425 1197.6971299358602 42.421 2 -0.20139799498515737 0.05074413441457036 0.6207951584208072 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 90221 7640 REDTLRVLAA True H1975_Epitope_Rep2 1142.64077074778 1142.6391149037902 34.339 3 -0.20141427369054854 0.05074413441457036 0.6208327826242365 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 125158 8209 VIGSGC[Carbamidomethyl]NL True NCI_RA007_Epitope_Rep2 818.3956386222101 818.3950849679301 36.568 1 -0.2014244581458079 0.05074413441457036 0.6208563178015594 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'LDHA|p.R268Gfs*9|1|0.08|ENSG00000134333|chr11:18405540-18405540|A/-|frameshift_variant', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 92688 4358 RNRKSWRKQGP True H1975_Epitope_Rep3 1411.79089765247 1411.78924490379 21.881 3 -0.20144823953207325 0.05076103930311753 0.6209112630097162 ['ENST00000542357.1_1_12:6747897-6752833:-|nuORF'] 73238 13678 MSDTTFKAL True PC9_epitope_Rep1 1012.48993265044 1012.4888299358599 57.466 2 -0.2014636445291902 0.05076103930311753 0.6209468469360071 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF'] 71529 20816 MAAAWPLLL True H1975_Epitope_Rep3 984.5466596809199 984.54556993586 86.958 2 -0.20148277408347376 0.050776987620875194 0.6209910251935904 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 124419 12393 VGVFIEQPTP True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 52.699 2 -0.2014838848422711 0.050776987620875194 0.6209935901005039 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 93893 11679 RRFKWAIEL True NCI_RA007_Epitope_Rep4 1217.7033114346898 1217.70166490379 51.883 3 -0.20153046242757866 0.050776987620875194 0.621101114380169 ['nc|ENSG00000128463|Q5J8M3-3|EMC4', 'ENST00000557941.1_1_15:34517315-34518058:+|nuORF', 'nc|ENSG00000128463|Q5J8M3-2|EMC4', 'ENSG00000128463|ENST00000267750|EMC4'] 100981 12630 SLFRSNLVP True PC9_epitope_Rep4 1031.5763795860698 1031.5752899358602 56.421 2 -0.2015368415516375 0.0507929341384954 0.6211158359727387 ['ENST00000590891.1_1_16:4659124-4659325:-|nuORF'] 82020 16548 PLVPTASENCP True H1975_Epitope_Rep2 1126.53286009158 1126.5317699358602 68.877 2 -0.20162597731260784 0.0507929341384954 0.6213214253267092 ['ENSG00000196531|ENST00000454682|NACA'] 18496 9430 EKEVNQLREK True NCI_RA007_Epitope_Rep2 1271.6833638357496 1271.6822699358602 41.29 2 -0.2016568738640563 0.0507929341384954 0.6213926368751157 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 17501 4815 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 26.009 3 -0.2017068012514089 0.05080887885628292 0.6215076564037202 ['ENSG00000162378|ENST00000294353|ZYG11B'] 46583 8099 ITAPPGTAA True PC9_epitope_Rep5 797.42831837005 797.4272299358599 36.091 2 -0.20172711698153228 0.05080887885628292 0.6215544390302016 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 31492 5237 GEASPPAPP True NCI_RA007_Epitope_Rep5 821.3919328613299 821.39082993586 26.841 2 -0.2017835436479076 0.05080887885628292 0.6216843181029575 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 38454 7067 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 32.581 2 -0.20192465537994683 0.05093959857790486 0.6220087394302019 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 449 15801 AALPVNVKI True PC9_epitope_Rep4 923.5804023373499 923.57930993586 68.704 2 -0.20212680023108237 0.051012922521302406 0.6224725320191532 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 5896 7037 APGKGILAA True PC9_epitope_Rep2 796.4806882960798 796.47958993586 32.468 2 -0.20229041912423093 0.051012922521302406 0.6228471160414806 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 59955 16030 LGGVGSLSL True PC9_epitope_Rep6 801.4596184983301 801.4590749679301 73.984 1 -0.20242771190373735 0.051048622213862506 0.6231608663276565 ['ENST00000409106.5_2_2:114513945-114514152:-|nuORF'] 71938 8273 MEQVKVQIA True H1975_Epitope_Rep2 1044.5637662970398 1044.5626699358602 36.774 2 -0.2024550288909037 0.051048622213862506 0.6232232315192541 ['ENSG00000099800|ENST00000215570|TIMM13'] 7114 5555 AQVHVNGGAL True NCI_RA007_Epitope_Rep5 964.5090283022399 964.50792993586 28.053 2 -0.20252305904596643 0.051085280066207724 0.6233784571386729 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant', 'TNS1|p.G1313Afs*51|1|0.17|ENSG00000079308|chr2:217818082-217818082|C/-|frameshift_variant'] 47124 9566 ITVESDFSNP True H1975_Epitope_Rep2 1107.50841916555 1107.50732993586 41.771 2 -0.202603364637143 0.051138821493727546 0.623561529315999 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 102257 16391 SLSIDTFSY True PC9_epitope_Rep5 1031.48114178855 1031.48004993586 68.046 2 -0.20261650690517002 0.051138821493727546 0.6235914729096023 ['nc|ENSG00000108231|O95970-2|LGI1', 'ENSG00000108231|ENST00000371418|LGI1', 'nc|ENSG00000108231|O95970-3|LGI1'] 91332 25288 RGRRRRRRPMS True PC9_epitope_Rep3 1482.8650827355798 1482.8639899358602 102.67 2 -0.2026415497455464 0.051138821493727546 0.6236485179461041 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant', 'NOTCH3|p.C608Afs*8|1|0.71|ENSG00000074181|chr19:15187124-15187124|G/-|frameshift_variant', 'ENSG00000074181|ENST00000263388|NOTCH3'] 5950 10528 APGYSYTAA True PC9_epitope_Rep1 899.4024975450299 899.40194496793 45.386 1 -0.20273183859854227 0.05121212691128623 0.6238540446599748 ['ENSG00000172115|ENST00000305786|CYCS'] 103991 14182 SQCSQRSEDLY True H1975_Epitope_Rep2 1314.55102933686 1314.54992993586 59.703 2 -0.20275511995950737 0.05121212691128623 0.6239070045097271 ['CON__ENSEMBL:ENSBTAP00000031900'] 86825 13515 QLQAELRSL True PC9_epitope_Rep5 1056.5927579262 1056.5916699358602 57.006 2 -0.2028151219056609 0.05124781374005604 0.6240434272283463 ['ENST00000576487.5_1_17:7011095-7018009:-|nuORF', 'nc|ENSG00000161944|P07307-3|ASGR2', 'nc|ENSG00000161944|P07307-2|ASGR2', 'ENSG00000161944|ENST00000691900|ASGR2', 'nc|ENSG00000161944|P07307|ASGR2'] 122462 20941 VGEEFQIVL True PC9_epitope_Rep4 1032.5491617787197 1032.5480699358602 88.709 2 -0.2028366624045842 0.05124781374005604 0.6240923785666148 ['nc|ENSG00000163297|P58335|ANTXR2', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335-3|ANTXR2'] 34421 17863 GPITLLVQ True NCI_RA007_Epitope_Rep2 839.5116540711899 839.51110496793 74.223 1 -0.20297953541159866 0.0512646920545369 0.6244167408304605 ['nc|ENSG00000165521|Q05BV3|EML5', 'ENSG00000165521|ENST00000554922|EML5', 'ENST00000553281.5_1_14:89088194-89171927:-|nuORF', 'nc|ENSG00000165521|Q05BV3-2|EML5', 'EML5|p.E1680Rfs*7|1|0.14|ENSG00000165521|chr14:88621254-88621255|-/C|frameshift_variant'] 64227 14519 LPGVAGAVG True PC9_epitope_Rep4 739.42283906679 739.42229496793 63.762 1 -0.2029940054699501 0.0512646920545369 0.6244495609339396 ['ENSG00000164692|ENST00000297268|COL1A2', 'COL1A2|p.R882H|1|0.23|ENSG00000164692|chr7:94424415-94424415|G/A|missense_variant'] 62247 20124 LLFFAYDVFG True PC9_epitope_Rep3 1190.6011973515797 1190.60010993586 82.66 2 -0.20303356257688238 0.05127771196479946 0.6245392528313416 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'ENST00000495874.5_1_1:43220834-43223503:-|nuORF'] 134349 7710 VYPEKLATKF True NCI_RA007_Epitope_Rep3 1194.6648602372995 1194.66322490379 37.448 3 -0.20306342142433764 0.05127771196479946 0.6246069266322213 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 67958 4544 LTDDLHKQY True H1975_Epitope_Rep3 1131.55603806431 1131.55438490379 22.598 3 -0.20312453551061027 0.05127771196479946 0.6247453633794285 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 108827 14373 SYVPKVAGL True PC9_epitope_Rep4 932.5331177917599 932.53202993586 63.193 2 -0.20314439789813313 0.05127771196479946 0.6247903341247139 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 72850 5937 MPNGTPHPTAA True PC9_epitope_Rep3 1092.50222866964 1092.50112993586 27.895 2 -0.2031610866347713 0.05127771196479946 0.6248281110535128 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 56168 16727 LAVVAGVAAE True PC9_epitope_Rep1 898.5123823471799 898.51128993586 69.168 2 -0.20316383738063593 0.05127771196479946 0.6248343369642213 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 8240 7796 ATGIILPAR True NCI_RA007_Epitope_Rep3 910.5600012459399 910.55890993586 37.789 2 -0.2031979836795089 0.051331227436823106 0.6249116049680626 ['ENSG00000163909|ENST00000372852|HEYL'] 70144 13677 LVPPDQPEV True PC9_epitope_Rep4 992.51786165044 992.51676993586 60.499 2 -0.20320057210030865 0.051331227436823106 0.6249174608860273 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 130139 8289 VSDSISAQY True H1975_Epitope_Rep1 968.4450906330001 968.44398993586 36.816 2 -0.20320300542245243 0.051331227436823106 0.624922965750026 ['ENST00000504824.5_1_5:218488-235547:+|nuORF', 'ENSG00000073578|ENST00000264932|SDHA', 'ENST00000505555.5_1_5:218470-251793:+|nuORF', 'ENST00000502379.5_1_5:218428-224813:+|nuORF', 'nc|ENSG00000073578|P31040-3|SDHA', 'nc|ENSG00000073578|P31040-2|SDHA'] 115953 18365 TSHHAWLILY True H1975_Epitope_Rep2 1239.64004247179 1239.6389499358602 76.174 2 -0.20321582000676217 0.05134809912382958 0.6249519533111836 ['ENST00000341259.6_1_12:111887440-111887905:+|nuORF'] 107946 13995 SVWTKVEGV True PC9_epitope_Rep4 1003.5338460677498 1003.53274993586 61.739 2 -0.2032259200633941 0.05134809912382958 0.624974797256046 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 20995 2632 EQRIKEAI True NCI_RA007_Epitope_Rep5 985.5556441414898 985.55454993586 14.812 2 -0.20324380703977563 0.051363038165068625 0.625015246565494 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 55671 13000 LALDVVRA True PC9_epitope_Rep1 855.5178020807899 855.51670993586 54.875 2 -0.20324884682952565 0.051363038165068625 0.6250266418899747 ['ENST00000540276.1_1_11:60692015-60695132:+|nuORF'] 137438 6020 YEDGGKPPVP True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 28.134 2 -0.20325737727452392 0.051363038165068625 0.6250459282605834 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 76326 19385 NPTLILAA True PC9_epitope_Rep1 811.4803539429099 811.47924993586 79.374 2 -0.20326339626397233 0.051363038165068625 0.6250595353232961 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 95237 15653 RVLPPSALQSV True PC9_epitope_Rep5 1165.68190728377 1165.68080993586 65.222 2 -0.20327510887335168 0.05137700911739825 0.6250860110647326 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'nc|ENSG00000178999|Q96GD4-2|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB'] 34322 7338 GPAQSPLQS True PC9_epitope_Rep2 883.4399456829099 883.4393949679301 33.607 1 -0.20328487933196315 0.05137700911739825 0.6251080938211564 ['MAGEC1|p.P813L|1|0.64|ENSG00000155495|chrX:141907842-141907842|C/T|missense_variant', 'ENSG00000155495|ENST00000285879|MAGEC1'] 125086 12232 VIEGCEIK True NCI_RA007_Epitope_Rep5 889.45790424617 889.45680993586 53.701 2 -0.20332203369057272 0.05137700911739825 0.6251920447431648 ['ENSG00000162944|ENST00000295049|RFTN2', 'ENST00000494346.1_1_2:198436734-198482697:-|nuORF'] 77726 13698 NTLGVTVLS True PC9_epitope_Rep2 902.50729696674 902.50618993586 57.981 2 -0.20332685298791928 0.05137700911739825 0.6252029312792369 ['ENSG00000100104|ENST00000215917|SRRD'] 89578 6284 QYNPHVHQL True PC9_epitope_Rep3 1134.55704112382 1134.55540490379 29.205 3 -0.20335031059966974 0.05137700911739825 0.6252559117574237 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 104077 15998 SQDSFYRVL True PC9_epitope_Rep4 1113.54547338061 1113.54436993586 69.469 2 -0.2034623534842874 0.05141364012331754 0.6255087612655128 ['ENSG00000143179|ENST00000367879|UCK2', 'UCK2|p.S70L|1|0.15|ENSG00000143179|chr1:165890313-165890313|C/T|missense_variant'] 26528 7528 FIGSEDIR True NCI_RA007_Epitope_Rep1 935.4712458111899 935.47014993586 33.274 2 -0.20349796272517076 0.05142663809631217 0.6255890499516502 ['ENSG00000187775|ENST00000389840|DNAH17'] 128633 9309 VPVDTGVAA True PC9_epitope_Rep4 827.4388830537498 827.43778993586 43.413 2 -0.2035141046249515 0.05142663809631217 0.6256254339892839 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 63294 21012 LLSSLNLLL True PC9_epitope_Rep1 984.62193279616 984.62082993586 85.651 2 -0.2035294010263373 0.05142663809631217 0.625659905733674 ['ENSG00000132854|ENST00000371153|KANK4'] 44693 16057 ILTNNQTL True PC9_epitope_Rep2 915.50254593947 915.50144993586 67.019 2 -0.20355242525133038 0.05142663809631217 0.6257117808087695 ['nc|ENSG00000167123|Q5T4B2-2|CERCAM', 'ENSG00000167123|ENST00000372838|CERCAM'] 30304 4695 GAAGVNRL True PC9_epitope_Rep4 756.4242360491199 756.42312993586 24.601 2 -0.2035551718684554 0.05142663809631217 0.6257179681547516 ['ENSG00000136444|ENST00000258955|RSAD1', 'ENST00000443328.2_1_17:48556221-48557532:+|nuORF'] 27458 6162 FM[Oxidation]C[Carbamidomethyl]QGGDFTR True H1975_Epitope_Rep3 1233.4906786696397 1233.48958993586 28.714 2 -0.20356293643774404 0.05142663809631217 0.6257354584096978 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000289549|F5H284|PPIAL4D', 'nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000279782|ENST00000581138|PPIAL4F', 'ENSG00000271567|ENST00000581164|PPIAL4E', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A', 'ENST00000428093.1_1_2:68352508-68352655:+|nuORF'] 72594 22046 MLSALQVAL True PC9_epitope_Rep3 944.53648892004 944.5353899358599 90.097 2 -0.20374217525421315 0.051519651147491685 0.6261387520501159 ['ENSG00000198569|ENST00000673835|SLC34A3'] 140854 17506 YSDSGLFGIY True H1975_Epitope_Rep1 1120.5076908895599 1120.50717496793 72.833 1 -0.20377129995858242 0.051555304952542055 0.6262042013615567 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'UQCRC2|p.L444Ffs*8|1|0.28|ENSG00000140740|chr16:21983137-21983138|-/T|frameshift_variant', 'ENSG00000140740|ENST00000268379|UQCRC2'] 52930 9804 KPGKPRKRKKR True NCI_RA007_Epitope_Rep5 1377.9157042427698 1377.91405490379 44.358 3 -0.2037764450172205 0.051555304952542055 0.6262157609960884 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 58777 7205 LESGPHREMA True H1975_Epitope_Rep3 1125.52369239021 1125.5225899358602 32.69 2 -0.20387343181751358 0.05162951546818028 0.626433531376334 ['ENST00000484414.5_1_3:67048755-67053668:+|nuORF', 'ENST00000469661.1_1_3:67048755-67053962:+|nuORF'] 5820 17241 APELQGVEV True PC9_epitope_Rep1 940.4865615221598 940.48546993586 71.136 2 -0.20392555196681536 0.05166322119902274 0.6265504546580647 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 84224 20727 PYLFPVAA True PC9_epitope_Rep4 876.4745402864799 876.47399496793 87.891 1 -0.20399717682765295 0.05166322119902274 0.6267110136683832 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 36315 10101 GVEIC[Carbamidomethyl]IATPGR True NCI_RA007_Epitope_Rep2 1171.6019429903397 1171.6008499358602 43.879 2 -0.20399952383666456 0.05166322119902274 0.6267162725287473 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 35095 8009 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 35.782 2 -0.20402951358909074 0.05166322119902274 0.6267834563876825 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 23646 20534 EWTVDTSKLVF True PC9_epitope_Rep4 1323.6710678165498 1323.66996993586 87.134 2 -0.20412771428751642 0.051680072164173495 0.6270032779786079 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 87197 19886 QPILLELEA True PC9_epitope_Rep6 1024.580461907 1024.57936993586 89.146 2 -0.20413641794781595 0.051680072164173495 0.6270227484802795 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 1357 9953 AEEADLIQA True H1975_Epitope_Rep3 958.4607406971398 958.4596499358599 43.318 2 -0.20421392536746436 0.051716685772273695 0.6271960459422121 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 62643 6799 LLLEQGKA True H1975_Epitope_Rep3 870.5174677276199 870.51636993586 31.105 2 -0.2042851263011695 0.05178796249318827 0.6273550997806479 ['ENSG00000171827|ENST00000330173|ZNF570'] 125838 16972 VLADVIDN True PC9_epitope_Rep2 857.44944773745 857.4488949679301 70.53 1 -0.20432195106067325 0.05178796249318827 0.6274373078884085 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 69017 10083 LTQAIPLHRL True H1975_Epitope_Rep3 1160.70297708152 1160.7018899358602 43.823 2 -0.20433822218530145 0.05178796249318827 0.6274736201100026 ['ENSG00000204347|ENST00000375366|BTBD17'] 66277 2867 LSFIKILLKRR True NCI_RA007_Epitope_Rep1 1385.9234749618097 1385.92183490379 14.976 3 -0.2043449167936143 0.05178796249318827 0.6274885583724149 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|122|3|sense'] 5020 19127 ALIESLLNTL True PC9_epitope_Rep5 1085.63322575585 1085.6321299358601 78.606 2 -0.20442058413720535 0.05180383314543405 0.6276573173931786 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11'] 102306 18807 SLSPSLESL True PC9_epitope_Rep6 931.48622716899 931.48512993586 84.983 2 -0.20446926870459148 0.05180383314543405 0.6277658157082682 ['USP9X|p.D1077E|1|0.11|ENSG00000124486|chrX:41184080-41184080|C/A|missense_variant'] 133084 15495 VVQAVIEQ True PC9_epitope_Rep4 884.4967322830398 884.49562993586 67.527 2 -0.20450201327086912 0.05180383314543405 0.6278387542123189 ['ENST00000471757.5_1_2:96691131-96693504:-|nuORF', 'nc|ENSG00000186281|Q6NUI2-3|GPAT2', 'ENST00000486463.5_1_2:96687909-96693504:-|nuORF', 'ENST00000484440.5_1_2:96688852-96698107:-|nuORF', 'nc|ENSG00000186281|Q6NUI2|GPAT2', 'ENSG00000186281|ENST00000434632|GPAT2'] 114273 10835 TPPGPLASA True PC9_epitope_Rep2 809.42831837005 809.4272299358599 46.995 2 -0.2045419075405845 0.05184043892448469 0.62792757960499 ['ENSG00000124875|ENST00000226317|CXCL6'] 15228 6116 EAEEEFERRWR True NCI_RA007_Epitope_Rep1 1535.7117038419096 1535.7100649037898 27.827 3 -0.2046749630171426 0.051929508135121934 0.6282235201823136 ['ENSG00000181409|ENST00000326724|AATK', 'nc|ENSG00000181409|Q6ZMQ8-3|AATK'] 42904 17067 IERLVSYYY True PC9_epitope_Rep3 1204.61282466444 1204.61172993586 70.8 2 -0.20471646374315422 0.051929508135121934 0.6283157280831732 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-3|HS2ST1'] 24736 10886 FAPREFLR True NCI_RA007_Epitope_Rep4 1034.5661492555398 1034.56504993586 48.727 2 -0.2047399283626369 0.051929508135121934 0.6283678421503864 ['ENST00000358022.4_1_9:25677009-25677096:-|nuORF'] 20544 5086 EPRKQAGSLA True NCI_RA007_Epitope_Rep3 1055.5723568347898 1055.5712499358601 26.998 2 -0.20474669293981254 0.051929508135121934 0.6283828632780489 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF', 'ENST00000496181.1_1_6:167435938-167438429:+|nuORF', 'nc|ENSG00000272980|O95684-3|CEP43'] 141321 4109 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61324993586 20.898 2 -0.20475334743109833 0.051929508135121934 0.628397638751902 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 113397 7142 TLSDALRQW True NCI_RA007_Epitope_Rep1 1088.56145779792 1088.56036993586 31.771 2 -0.20482650213888495 0.05194731996918857 0.6285599911596972 ['ENSG00000112159|ENST00000369393|MDN1'] 43234 17979 IFLHTLNNI True PC9_epitope_Rep2 1083.60767971435 1083.60658993586 74.46 2 -0.20484219957001584 0.05196415487798005 0.6285948097406394 ['ENSG00000122140|ENST00000241600|MRPS2'] 59283 8267 LFGGLCFRFRD True NCI_RA007_Epitope_Rep1 1329.6652116738098 1329.66410993586 36.155 2 -0.20485737613027494 0.05196415487798005 0.6286284666724498 ['nc|ENSG00000102226|P51784|USP11'] 114547 17215 TQAPPSVIL True PC9_epitope_Rep4 924.5280324113199 924.52692993586 74.226 2 -0.20500823234473525 0.05198196505729852 0.6289626825343858 ['ENSG00000174839|ENST00000311128|DENND6A'] 66347 9789 LSGDLDSCVI True PC9_epitope_Rep2 1020.47976188956 1020.47866993586 42.99 2 -0.2051073672995319 0.052018560613176536 0.6291819790903941 ['ENSG00000166415|ENST00000360509|WDR72'] 55925 16347 LARDSLAL True PC9_epitope_Rep1 857.4970666362099 857.49596993586 67.699 2 -0.20526846039645297 0.05209272617974151 0.6295377707358693 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.A128S|1|0.29|ENSG00000137642|chr11:121470103-121470103|G/T|missense_variant'] 81713 13187 PLNKDHIPIT True PC9_epitope_Rep2 1146.6397081186199 1146.63805490379 55.999 3 -0.20535585968639028 0.05211053294009355 0.6297305103784641 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155'] 114584 20845 TQDGPVAFL True PC9_epitope_Rep2 946.4759968384599 946.47544496793 85.626 1 -0.20539183217020895 0.052143205980690485 0.6298097802058229 ['ENST00000609682.1_1_3:101395365-101395752:+|nuORF'] 130853 10964 VTCAYTTPGP True PC9_epitope_Rep1 1008.4586325221599 1008.45752993586 47.061 2 -0.20540602902016764 0.052143205980690485 0.6298410551847916 ['ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2'] 109746 4405 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 22.065 2 -0.20542585991832019 0.052143205980690485 0.6298847326648556 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 6508 8301 APTAITEA True PC9_epitope_Rep5 772.3966838886 772.39558993586 36.868 2 -0.20544012612737922 0.052143205980690485 0.629916147424385 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 99419 11427 SHYEEAMGL True PC9_epitope_Rep4 1035.43314605031 1035.43204993586 51.722 2 -0.2054527839191878 0.052143205980690485 0.6299440158224863 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 63633 21312 LMLQHITLL True PC9_epitope_Rep2 1080.6365373144802 1080.6354299358602 87.44 2 -0.2054635682867746 0.05216003005259204 0.6299677561569342 ['nc|ENSG00000116906|O15228-2|GNPAT', 'ENSG00000116906|ENST00000366647|GNPAT'] 139683 12379 YNGAVEAI True PC9_epitope_Rep3 835.4075829254699 835.40648993586 52.644 2 -0.20550355831969297 0.05216003005259204 0.6300557616573043 ['ENSG00000135917|ENST00000644224|SLC19A3'] 37080 20551 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49014993586 87.201 2 -0.20569954694367043 0.05223319935389354 0.6304864524163524 ['ENSG00000010292|ENST00000315579|NCAPD2'] 116659 12417 TVATVGQGIS True PC9_epitope_Rep3 931.4974605590298 931.49691496793 52.791 1 -0.2057428396592994 0.05223319935389354 0.6305814509661799 ['ENSG00000055147|ENST00000351797|FAM114A2'] 4980 5468 ALGTESPR True PC9_epitope_Rep1 829.4293809992099 829.42828993586 25.863 2 -0.2057514346737474 0.052248056192014426 0.6306003053159671 ['ENSG00000167194|ENST00000681219|C16orf92', 'nc|ENSG00000167194|Q96LL3|FIMP'] 138681 10224 YILENRPP True PC9_epitope_Rep4 1000.5341804209199 1000.53308993586 47.004 2 -0.20579299995243544 0.052248056192014426 0.6306914566452254 ['nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5', 'ENSG00000240764|ENST00000252087|PCDHGC5'] 32512 9699 GGETLDQVKMR True NCI_RA007_Epitope_Rep2 1232.6183210510399 1232.61722993586 42.347 2 -0.20579925397993848 0.052248056192014426 0.6307051675346577 ['ENSG00000078237|ENST00000179259|TIGAR'] 43045 11946 IETSTLTEEGV True PC9_epitope_Rep2 1177.57141334493 1177.57030993586 51.273 2 -0.20580204831251112 0.052248056192014426 0.6307112932950272 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 17504 5054 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 27.08 3 -0.20595358538143543 0.05228463575412699 0.6310431820875592 ['ENSG00000162378|ENST00000294353|ZYG11B'] 98212 5542 SETKVFTA True NCI_RA007_Epitope_Rep4 881.4494477374499 881.44834993586 27.913 2 -0.20603720403392164 0.05232023136584724 0.6312260571711081 ['UBAP2|p.D873Tfs*30|1|0.22|ENSG00000137073|chr9:33923974-33923974|C/-|frameshift_variant', 'ENSG00000137073|ENST00000379238|UBAP2'] 105036 8540 SRDPGTHFSL True PC9_epitope_Rep4 1115.5359713260702 1115.5348699358601 40.328 2 -0.20604398077367397 0.05232023136584724 0.6312408698247951 ['ENSG00000178078|ENST00000594605|STAP2', 'nc|ENSG00000178078|Q9UGK3-2|STAP2'] 110891 13607 TGSVDYLAL True NCI_RA007_Epitope_Rep3 937.47566248529 937.47456993586 60.822 2 -0.20608255700669137 0.05233802816901408 0.6313251667634643 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 136695 10927 WWWRRRRRHR True NCI_RA007_Epitope_Rep3 1649.9140815333299 1649.9124449037902 50.062 3 -0.20611297434256043 0.05235582430376894 0.631391606892688 ['ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF', 'ENST00000395136.6_2_1:70687096-70687432:+|nuORF'] 108463 11664 SYLTSASSL True NCI_RA007_Epitope_Rep5 927.45492704071 927.45382993586 51.519 2 -0.20619065427131508 0.05238944700028166 0.6315611701832593 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 134825 16092 VYVAALKTL True PC9_epitope_Rep2 976.5957180483199 976.59462993586 67.155 2 -0.2062108194327268 0.05238944700028166 0.6316051613540247 ['ENSG00000095015|ENST00000399503|MAP3K1'] 24452 21620 FADPDDFTL True PC9_epitope_Rep3 1039.4498416602698 1039.4487499358602 88.458 2 -0.2063058093230399 0.05238944700028166 0.6318122403780299 ['ENSG00000180921|ENST00000388913|FAM83H', 'FAM83H|p.A493P|1|0.23|ENSG00000180921|chr8:143727984-143727984|C/G|missense_variant'] 95522 12186 RWRKRWRWRRY True NCI_RA007_Epitope_Rep2 1804.0134612214297 1804.01236993586 51.999 2 -0.206307090812592 0.05238944700028166 0.6318150323988045 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 130311 19523 VSIAELAQA True PC9_epitope_Rep2 900.4916469025999 900.49054993586 80.479 2 -0.20630901962037237 0.052406256454550576 0.6318192346694191 ['ENSG00000198171|ENST00000354488|DDRGK1'] 29426 17054 FVDVLGLEEE True H1975_Epitope_Rep3 1148.5601203852398 1148.5595749679298 71.201 1 -0.20632553121160707 0.052406256454550576 0.6318552042290443 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 45551 6302 IQRTPKIQVYS True H1975_Epitope_Rep1 1331.75613485319 1331.7544949037901 29.307 3 -0.2063709419557593 0.052424048969168954 0.6319540915653883 ['ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'ENSG00000166710|ENST00000648006|B2M', 'B2M|p.F82Ifs*20|1|0.36|ENSG00000166710|chr15:44715596-44715599|TCTT/-|frameshift_variant'] 109935 14395 TEGEPPFLP True H1975_Epitope_Rep3 985.4756624852898 985.47511496793 60.724 1 -0.20641433018133235 0.05243987157582471 0.6320485234238375 ['ENSG00000241058|ENST00000377304|NSUN6'] 56328 9039 LDCHMALIA True H1975_Epitope_Rep3 985.4725087644899 985.47140993586 39.756 2 -0.20641753894172732 0.05243987157582471 0.6320555051109864 ['ENST00000419888.1_1_20:18763070-18763415:-|nuORF'] 78543 11917 NYPSAFHSV True PC9_epitope_Rep5 1020.46649478392 1020.46538993586 50.836 2 -0.20646836841750799 0.05243987157582471 0.6321660644510984 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 114193 6751 TPLHVTSPSSA True PC9_epitope_Rep4 1095.55603806431 1095.5549499358601 33.164 2 -0.20658990974647706 0.05249521234651346 0.632430151213466 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 4306 22197 AIIGGMFTV True PC9_epitope_Rep3 907.48372507119 907.48262993586 90.666 2 -0.20660829242670387 0.0525120156203064 0.6324700592373641 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 113384 12736 TLSAFPEETGY True H1975_Epitope_Rep2 1213.55028397753 1213.54918993586 54.092 2 -0.20664311439190966 0.0525120156203064 0.6325456316844558 ['ENST00000560980.5_1_15:71197061-71276639:+|nuORF'] 70643 26689 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 110.35 3 -0.20674039377841869 0.052529803811133015 0.6327565821249774 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 78696 5080 PAAAAAAAAA True PC9_epitope_Rep3 754.3973525949399 754.3962499358599 24.626 2 -0.20687860735707128 0.05258119016331894 0.633055867227802 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'ENST00000257359.6_1_11:130297588-130298293:-|nuORF', 'ENST00000370272.8_1_1:93811487-93811679:+|nuORF', 'ENST00000280665.10_1_12:2062308-2062389:-|nuORF', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENSG00000163064|ENST00000295206|EN1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 115251 11886 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.58167496793 51.043 1 -0.20689656636396214 0.05258119016331894 0.6330947181980939 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 90018 8771 RDRDRQRERRR True NCI_RA007_Epitope_Rep2 1597.8733984898097 1597.8717449037902 38.764 3 -0.20693118238034974 0.05258119016331894 0.6331695794305806 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 53181 7874 KQDLPNAM True PC9_epitope_Rep3 915.44840219163 915.44730993586 35.271 2 -0.20693454555748172 0.05258119016331894 0.6331768510094893 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 101664 19182 SLLVEVEEVV True PC9_epitope_Rep4 1114.6121559581 1114.6110499358601 81.88 2 -0.207006888173875 0.05258119016331894 0.6333331917069304 ['ENST00000434813.3_1_2:201724904-201726163:-|nuORF', 'ENST00000473565.5_1_2:201725944-201726163:-|nuORF'] 107608 18044 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 74.422 2 -0.20707115000305784 0.052617746991796666 0.6334719528514027 ['ENSG00000115919|ENST00000264170|KYNU'] 77239 12799 NRWWRWRRARW True NCI_RA007_Epitope_Rep2 1727.9134128269898 1727.91230993586 54.403 2 -0.20716712726556605 0.052633554829748096 0.6336789942472142 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 132006 19671 VTSPVWTQLP True PC9_epitope_Rep1 1126.60225998074 1126.60116993586 80.488 2 -0.20721407960442925 0.052633554829748096 0.6337801908614864 ['ENST00000524624.5_1_8:144674908-144679524:-|nuORF', 'ENST00000528303.5_1_8:144674908-144676084:-|nuORF', 'ENST00000526340.5_1_8:144674908-144676158:-|nuORF'] 103335 12712 SPMPGTLTA True PC9_epitope_Rep4 873.4266041178901 873.42550993586 56.751 2 -0.20727449645748613 0.052633554829748096 0.6339103220164702 ['ENSG00000113456|ENST00000382038|RAD1'] 138680 10794 YILENRPP True PC9_epitope_Rep2 1000.5341804209199 1000.53308993586 46.837 2 -0.20739320677346926 0.052650349125309706 0.6341657303804827 ['nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5', 'ENSG00000240764|ENST00000252087|PCDHGC5'] 98376 23441 SEYPLFLLV True PC9_epitope_Rep2 1079.59029831471 1079.58920993586 95.637 2 -0.20739768520736246 0.052650349125309706 0.6341753585776321 ['ENST00000404404.5_1_7:5036439-5036553:+|nuORF'] 128398 5384 VPRPETAVA True PC9_epitope_Rep4 938.5185303567798 938.51742993586 27.439 2 -0.20755500861580897 0.052684922765066915 0.6345132533838225 ['F3|p.L55*|1|0.16|ENSG00000117525|chr1:94540304-94540305|CA/-|frameshift_variant', 'ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 95846 14656 RYKGPGFEYF True PC9_epitope_Rep4 1262.6084079903396 1262.6067749037902 64.306 3 -0.20755553969268747 0.052684922765066915 0.634514392912393 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 32511 9909 GGETLDQVKMR True NCI_RA007_Epitope_Rep1 1232.6183210510399 1232.61722993586 42.547 2 -0.207568445538881 0.052684922765066915 0.6345420826300758 ['ENSG00000078237|ENST00000179259|TIGAR'] 59953 18292 LGGVGSLSL True PC9_epitope_Rep1 801.4596184983301 801.4590749679301 75.149 1 -0.20763488094696048 0.052702702702702706 0.6346845516242127 ['ENST00000409106.5_2_2:114513945-114514152:-|nuORF'] 6096 23306 APLVTLEVL True PC9_epitope_Rep1 953.57973363101 953.57862993586 94.435 2 -0.20767291165532722 0.05271949251154236 0.6347660552451586 ['ENSG00000125872|ENST00000378858|LRRN4'] 39711 5441 HLTGEFEK True PC9_epitope_Rep3 959.47124581119 959.47014993586 26.002 2 -0.20769172454392196 0.05271949251154236 0.6348063590957476 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 32514 14103 GGETLDQVKMR True PC9_epitope_Rep3 1232.6183210510399 1232.61722993586 59.332 2 -0.20776722281959478 0.05276985437621979 0.6349680095107486 ['ENSG00000078237|ENST00000179259|TIGAR'] 29548 6094 FVIATSTK True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 30.957 2 -0.20776888388069784 0.05276985437621979 0.634971564348474 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 133595 16254 VWYPGKPLKV True PC9_epitope_Rep5 1185.6910154154898 1185.68935490379 67.511 3 -0.2078460577786661 0.05276985437621979 0.6351366443708404 ['ENSG00000118849|ENST00000237696|RARRES1'] 31821 10323 GEIPKVLVA True NCI_RA007_Epitope_Rep4 924.5644179200399 924.56332993586 46.563 2 -0.20784824249746678 0.05276985437621979 0.6351413153517423 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 57857 20175 LEEYNEML True PC9_epitope_Rep5 1039.45321278855 1039.45210993586 82.651 2 -0.20785962586290957 0.05276985437621979 0.6351656512318122 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 73998 9357 NDEELNKLLGK True NCI_RA007_Epitope_Rep4 1271.6721304457099 1271.67049490379 42.847 3 -0.2078713790266687 0.05276985437621979 0.6351907741156205 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 33659 17709 GLGPLQLAV True PC9_epitope_Rep6 866.5225531080599 866.52144993586 80.751 2 -0.20794744709401683 0.052825160915010605 0.6353532851919107 ['ENST00000585457.5_1_17:42253853-42254417:-|nuORF'] 140280 15374 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54346496793 67.069 1 -0.20803654872637375 0.05286170013135673 0.635543448102937 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 9240 20938 AVPDLYFENA True PC9_epitope_Rep1 1137.53423999057 1137.5331499358601 85.359 2 -0.2081243830134736 0.052935767765664 0.6357307026168691 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 64145 5078 LPEVGAKG True H1975_Epitope_Rep1 769.4334037504899 769.43230993586 24.604 2 -0.2081805073299932 0.05295254536243034 0.6358502486552617 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 112985 16479 TLLSEDMRK True PC9_epitope_Rep5 1091.5644945730298 1091.5633899358602 68.384 2 -0.2081845711587499 0.05295254536243034 0.6358589014999274 ['ENSG00000154781|ENST00000383794|CCDC174', 'CCDC174|p.T436Nfs*23|1|0.73|ENSG00000154781|chr3:14671095-14671096|-/A|frameshift_variant', 'CCDC174|p.D443Rfs*16|1|0.12|ENSG00000154781|chr3:14671111-14671112|-/C|frameshift_variant', 'ENST00000465759.1_1_3:14693292-14708492:+|nuORF'] 56106 9449 LATVTVRP True PC9_epitope_Rep2 855.5178020807899 855.51670993586 41.684 2 -0.20821341043649153 0.05297031560776072 0.6359202946733346 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 90033 5735 RDSVFLRFRTR True NCI_RA007_Epitope_Rep1 1451.8109643907096 1451.80930490379 26.365 3 -0.20822734263862988 0.0529860967784303 0.635949945808155 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135282676-135283553:+|nuORF'] 85061 9113 QEISHLIEP True NCI_RA007_Epitope_Rep3 1064.55022440788 1064.54912993586 42.931 2 -0.20827804933813723 0.0529860967784303 0.6360578192104948 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 83342 18354 PTEKFLQEL True PC9_epitope_Rep2 1103.58627556343 1103.5851699358602 75.929 2 -0.20828592626397785 0.0529860967784303 0.6360745705448521 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1'] 40289 14581 HQLTEVGTMNI True PC9_epitope_Rep4 1241.60742201417 1241.60632993586 64.004 2 -0.20833239849867308 0.053000881784581906 0.6361733669457611 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 48974 15115 KEEYWRRREEE True NCI_RA007_Epitope_Rep1 1608.76446769076 1608.76336993586 62.864 2 -0.20833428988909808 0.053000881784581906 0.6361773867011784 ['ENSG00000056097|ENST00000265069|ZFR'] 40488 8746 HRDLRAANVL True PC9_epitope_Rep1 1163.65233849099 1163.65069490379 38.48 3 -0.20835837469823057 0.053000881784581906 0.6362285657604342 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN'] 4212 11390 AIARKLLLM True NCI_RA007_Epitope_Rep4 1027.65760711223 1027.6565099358602 50.725 2 -0.20836833967918533 0.053000881784581906 0.6362497364326002 ['ENSG00000204361|ENST00000389586|NXPE2', 'nc|ENSG00000204361|Q96DL1-3|NXPE2'] 82399 22805 PPLQLQELF True H1975_Epitope_Rep1 1083.59644632431 1083.5953499358602 94.85 2 -0.20841763435558716 0.05303342963268675 0.6363544251696938 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000486282.6_1_1:110163774-110168851:+|nuORF'] 46218 15051 ISNHDVIL True PC9_epitope_Rep4 909.4919812557699 909.49088993586 65.826 2 -0.20842918739862776 0.05303342963268675 0.6363789515711955 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B', 'nc|ENSG00000204084|P32019-3|INPP5B', 'ENSG00000204084|ENST00000373024|INPP5B', 'INPP5B-SF3A3|1|fusion'] 54755 6157 KYMYQPMT True NCI_RA007_Epitope_Rep3 1060.4721744113199 1060.4710699358602 31.219 2 -0.20850631590312962 0.05303342963268675 0.6365426013839595 ['ENSG00000187068|ENST00000335012|C3orf70'] 114214 8590 TPLSLKRPP True H1975_Epitope_Rep1 1007.6127650947899 1007.61166993586 37.97 2 -0.20852554526824862 0.05303342963268675 0.6365833777149109 ['nc|ENSG00000144460|Q9P242|NYAP2', 'ENSG00000144460|ENST00000272907|NYAP2'] 43187 22546 IFICCIVMLI True PC9_epitope_Rep1 1166.62656687774 1166.62546993586 91.525 2 -0.20854387535986332 0.05303342963268675 0.6366222381354454 ['OR2M7|p.V208I|1|0.23|ENSG00000177186|chr1:248323947-248323947|C/T|missense_variant'] 104360 13306 SQISQLQRL True PC9_epitope_Rep5 1071.6036569630699 1071.60254993586 56.194 2 -0.2087028325188275 0.05310747181420827 0.636958865414816 ['ENST00000462400.1_1_16:24816349-24826700:+|nuORF', 'nc|ENSG00000090905|Q8NDV7-3|TNRC6A', 'nc|ENSG00000090905|Q8NDV7-2|TNRC6A', 'nc|ENSG00000090905|Q8NDV7-6|TNRC6A', 'nc|ENSG00000090905|Q8NDV7-5|TNRC6A', 'ENSG00000090905|ENST00000395799|TNRC6A'] 76286 11233 NPNELSVSA True PC9_epitope_Rep1 929.44542498617 929.44432993586 48.087 2 -0.20875108059478073 0.05314299649214954 0.6370609112700396 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 121369 8039 VEVPAPAA True H1975_Epitope_Rep2 752.4068546494799 752.40574993586 35.872 2 -0.20877773154398888 0.05314299649214954 0.637117252694621 ['ENST00000462672.1_1_10:131506162-131515894:+|nuORF', 'ENSG00000170430|ENST00000651593|MGMT'] 142355 8039 YYEHVKARF True PC9_epitope_Rep1 1211.60874234351 1211.60764993586 35.743 2 -0.20882338635484257 0.0531577663984394 0.6372137262711347 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 119068 7438 VAGKPMYL True H1975_Epitope_Rep2 877.47316038749 877.47206993586 33.556 2 -0.20883433120056452 0.0531577663984394 0.6372368458614688 ['ENSG00000103888|ENST00000394685|CEMIP', 'nc|ENSG00000103888|Q8WUJ3-2|CEMIP'] 24037 18111 EYNNIQHLF True PC9_epitope_Rep2 1176.5563724174801 1176.55526993586 74.966 2 -0.2088508855458448 0.0531577663984394 0.6372718088837859 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 602 7501 AARRGRGACP True NCI_RA007_Epitope_Rep3 1013.5301151833297 1013.52900993586 36.627 2 -0.2088676881342486 0.0531577663984394 0.6373072889112584 ['LGALS4|p.G70Afs*37|1|0.63|ENSG00000171747|chr19:38808874-38808874|C/-|frameshift_variant'] 102825 10704 SNPPAEYF True H1975_Epitope_Rep1 923.4024975450301 923.40140993586 46.132 2 -0.2088969429009721 0.05317153681683484 0.6373690452057866 ['ENSG00000183668|ENST00000270077|PSG9', 'nc|ENSG00000183668|Q00887-2|PSG9'] 67701 10951 LSWMCKTLNDP True PC9_epitope_Rep2 1306.6049794860198 1306.60388993586 47.443 2 -0.20895805178595725 0.05317153681683484 0.6374979732148093 ['nc|ENSG00000162585|Q6NZ36-4|FAAP20'] 39632 5380 HLPAGPSPA True PC9_epitope_Rep6 845.43955176009 845.43844993586 28.568 2 -0.20896072441871888 0.05317153681683484 0.6375036097418156 ['ENST00000394430.5_1_11:64511793-64512018:-|nuORF'] 78351 13103 NYKKFYEAF True PC9_epitope_Rep4 1208.5866099165999 1208.58496490379 58.294 3 -0.20899565144990953 0.05317153681683484 0.6375772530685794 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 75299 7920 NIKQISEVQ True PC9_epitope_Rep4 1057.57677350889 1057.57566993586 37.894 2 -0.20904308795412474 0.05317153681683484 0.6376772217727422 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 18133 12295 EIIRQLNGV True PC9_epitope_Rep4 1040.59784330664 1040.59727496793 55.107 1 -0.20909547796783304 0.053188297074268566 0.6377875617278954 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 64788 19537 LQAPPLTSL True PC9_epitope_Rep4 938.5436824754601 938.5431349679301 83.27 1 -0.20909693922856296 0.053188297074268566 0.637790638305668 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 73406 4446 [Acetylation]-M[Oxidation]TM[Oxidation]DKSELVQK True H1975_Epitope_Rep3 1382.64215391756 1382.64104993586 22.224 2 -0.20914945523841716 0.053222811919809467 0.637901170161864 ['ENSG00000166913|ENST00000353703|YWHAB'] 22503 7467 ETGDWDVDAP True H1975_Epitope_Rep2 1103.4407335285498 1103.43962993586 33.669 2 -0.2092138351662005 0.053222811919809467 0.6380365747459583 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-3|SVEP1'] 47027 5971 ITRENLEA True H1975_Epitope_Rep2 944.4927095317598 944.49160993586 27.946 2 -0.209224701805648 0.053222811919809467 0.6380594189858808 ['ENSG00000125901|ENST00000380325|MRPS26'] 81338 14760 PLARRLRDP True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 61.933 2 -0.20942060441562713 0.05324056709924237 0.6384707279504228 ['ENST00000396958.7_2_16:2933286-2946389:+|nuORF', 'ENST00000573965.1_3_16:2933286-2946490:+|nuORF'] 116593 4289 TVADHIQKV True PC9_epitope_Rep4 1009.5556441414899 1009.55454993586 22.907 2 -0.2095506099429374 0.0532760754603758 0.6387431340657724 ['ENSG00000181789|ENST00000314797|COPG1'] 112392 11146 TLATRRSL True NCI_RA007_Epitope_Rep4 916.54541381096 916.54430993586 49.747 2 -0.20960985288207698 0.0532760754603758 0.6388671234690336 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 96978 9232 SAYGGPVGA True PC9_epitope_Rep5 777.3657181134898 777.36516496793 40.457 1 -0.20965582506312 0.05328883222080552 0.6389632760912287 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 17973 4878 EIDKNDHLY True H1975_Epitope_Rep1 1145.53530261973 1145.53366490379 23.84 3 -0.20965882348906234 0.05328883222080552 0.6389695455219261 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.M479Wfs*5|1|0.2|ENSG00000102316|chrX:54815295-54815295|G/-|frameshift_variant', 'MAGED2|p.A472Qfs*12|1|0.16|ENSG00000102316|chrX:54815273-54815273|G/-|frameshift_variant'] 64259 13556 LPHGFTNMA True PC9_epitope_Rep5 986.4643866089401 986.46328993586 57.166 2 -0.20966803594855563 0.05328883222080552 0.6389888064692957 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 65622 13647 LSAELEITAV True H1975_Epitope_Rep2 1044.5702911461199 1044.56977496793 57.634 1 -0.209671360843296 0.05328883222080552 0.6389957574543114 ['FCRL2|p.P263T|1|0.41|ENSG00000132704|chr1:157768510-157768510|G/T|missense_variant'] 54877 19375 KYPHYFPLL True PC9_epitope_Rep2 1176.6331661862 1176.63151490379 79.902 3 -0.20967994983138927 0.05328883222080552 0.6390137121695219 ['ENSG00000172009|ENST00000307741|THOP1'] 130426 5922 VSLWLRRREHR True NCI_RA007_Epitope_Rep5 1506.8643969459 1506.8627549037901 29.466 3 -0.20968407039105388 0.05328883222080552 0.6390223252531267 ['ENSG00000178297|ENST00000696167|TMPRSS9', 'nc|ENSG00000178297|Q7Z410|TMPRSS9'] 16995 21307 EGALSLLCFL True PC9_epitope_Rep1 1064.55761828744 1064.55707496793 86.786 1 -0.2098025993461629 0.05332533328333302 0.6392698953503007 ['ENST00000593631.1_1_19:49901215-49902480:+|nuORF'] 30871 9619 GAPPRRAAP True PC9_epitope_Rep1 891.5038833521498 891.50278993586 41.855 2 -0.20983817452248052 0.05334208305990438 0.6393441301642159 ['ENST00000555567.5_1_14:75421952-75422225:-|nuORF'] 101432 9542 SLKRRFYFKE True NCI_RA007_Epitope_Rep1 1372.7615545868 1372.7599049037901 41.114 3 -0.2098497496271135 0.05334208305990438 0.6393682769352536 ['ENST00000486187.5_1_10:43078317-43078551:-|nuORF'] 15984 6838 EDRKDVVV True H1975_Epitope_Rep2 958.5083595958998 958.50726993586 31.218 2 -0.20989173716176074 0.05335983200839958 0.6394558379718559 ['nc|ENSG00000239732|Q9NR96-4|TLR9', 'nc|ENSG00000239732|Q9NR96-2|TLR9', 'nc|ENSG00000239732|Q9NR96-5|TLR9', 'ENSG00000239732|ENST00000360658|TLR9', 'nc|ENSG00000239732|Q9NR96-3|TLR9'] 99425 16179 SHYYDYPSI True PC9_epitope_Rep1 1143.48728979815 1143.48618993586 67.047 2 -0.20990246996604595 0.05337457817772778 0.6394782129364879 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 31291 18588 GDIEQFLITG True PC9_epitope_Rep6 1091.54989005471 1091.54937496793 84.14 1 -0.2099135160618567 0.05337457817772778 0.6395012379320145 ['COL11A1|p.Q221E|1|0.33|ENSG00000060718|chr1:103031235-103031235|G/C|missense_variant'] 96527 12011 SADRGLVL True PC9_epitope_Rep1 829.46576650793 829.46466993586 51.061 2 -0.2099365400724639 0.05337457817772778 0.6395492201555455 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 85661 21671 QGPLLLPGL True PC9_epitope_Rep1 906.5538532363399 906.55274993586 88.187 2 -0.2099479697025393 0.05337457817772778 0.639573034530177 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000131355|Q9BY15-3|ADGRE3'] 24841 17498 FAWERVRGL True PC9_epitope_Rep4 1132.6141620771198 1132.61306993586 75.307 2 -0.2099592081328861 0.053392324853302336 0.6395964472507816 ['ENSG00000124762|ENST00000244741|CDKN1A'] 17662 16060 EHLKYFVNM True PC9_epitope_Rep5 1179.57466533391 1179.5735699358602 66.764 2 -0.20995998394897167 0.05340706720404911 0.6395980633677442 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 30694 15219 GALEPHINAQI True PC9_epitope_Rep3 1161.61422164677 1161.6131299358601 63.687 2 -0.2099673902463092 0.05340706720404911 0.6396134907845363 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 91799 4881 RKHWIANNL True NCI_RA007_Epitope_Rep3 1150.63596015086 1150.63432490379 26.185 3 -0.21004254850422743 0.05340706720404911 0.6397699666641012 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000464173.5_1_20:30136866-30137929:+|nuORF', 'ENST00000483310.5_1_20:30136863-30150236:+|nuORF', 'ENST00000472128.5_1_20:30136905-30155443:+|nuORF', 'ENST00000492709.5_1_20:30132820-30157019:+|nuORF', 'ENST00000460389.5_1_20:30136650-30157019:+|nuORF'] 110190 9573 TEQETKVP True H1975_Epitope_Rep2 930.4658260775799 930.46472993586 41.797 2 -0.2100570770397385 0.05340706720404911 0.6398001976309161 ['nc|ENSG00000154358|Q5VST9-3|OBSCN'] 82182 5223 PNSDULGMEEK True PC9_epitope_Rep5 1269.4450242871296 1269.44392993586 25.107 2 -0.21014039509554105 0.05346230270310801 0.6399734610912183 ['ENSG00000138018|ENST00000260585|SELENOI'] 46358 5266 ISRHTFRGLK True NCI_RA007_Epitope_Rep4 1213.7043740638499 1213.70272490379 26.803 3 -0.21023357256303754 0.05351753613136634 0.6401670165966741 ['nc|ENSG00000108231|O95970-2|LGI1', 'ENSG00000108231|ENST00000371418|LGI1'] 885 8763 ADIRGFVA True NCI_RA007_Epitope_Rep3 847.4552018242299 847.45410993586 41.558 2 -0.21031934746241135 0.05357176329453223 0.6403449981661287 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 56169 16267 LAVVAGVAAE True PC9_epitope_Rep2 898.5123823471799 898.51128993586 67.812 2 -0.2103253109399643 0.05357176329453223 0.6403573652817186 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 106436 6044 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 30.753 3 -0.21043659804370698 0.053683223992502346 0.6405879865460966 ['ENSG00000058729|ENST00000283109|RIOK2'] 7835 12659 ASVPSPASI True PC9_epitope_Rep5 827.43888305375 827.43778993586 53.697 2 -0.21048328518646056 0.05370096155648441 0.6406846424192099 ['ENST00000529958.1_1_11:6704370-6704496:-|nuORF'] 109982 11971 TEIGSFVA True H1975_Epitope_Rep2 822.4123339527399 822.4117849679301 51.126 1 -0.21053576672709676 0.053731399227857114 0.6407932278772901 ['PCDHB14|p.L48V|1|0.08|ENSG00000120327|chr5:141223647-141223647|C/G|missense_variant', 'ENSG00000120327|ENST00000239449|PCDHB14'] 62869 7586 LLNAAAGK True NCI_RA007_Epitope_Rep1 756.4493881678 756.44828993586 33.501 2 -0.21064299153440405 0.053731399227857114 0.6410148597670243 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4', 'MAP3K4|p.G1039Pfs*16|1|0.05|ENSG00000085511|chr6:161091519-161091520|-/CCACTTGGTAAAGGAATTACCAAATATA|frameshift_variant'] 12698 11484 DLDTALPGT True PC9_epitope_Rep6 901.4392769765699 901.43816993586 55.246 2 -0.21064340816451338 0.053731399227857114 0.6410157203624617 ['ENSG00000269855|ENST00000601382|RNF225'] 43184 17974 IFHEVPLKF True PC9_epitope_Rep5 1128.6331661861998 1128.63151490379 74.155 3 -0.21065154648802176 0.053731399227857114 0.6410325300795222 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000483823.1_1_3:88997907-88998639:+|nuORF'] 59933 16243 LGGQLNVSV True PC9_epitope_Rep5 885.4919812557699 885.49088993586 67.468 2 -0.2106647405636441 0.053731399227857114 0.6410597788705621 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1'] 94529 20335 RRRRTRKSWLG True NCI_RA007_Epitope_Rep4 1470.8756303359398 1470.8745299358602 88.036 2 -0.2106820143882473 0.053731399227857114 0.6410954465703339 ['AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 134547 5471 VYRQLHNSLDP True NCI_RA007_Epitope_Rep2 1340.68369818892 1340.68204490379 25.898 3 -0.2106879839786496 0.053731399227857114 0.6411077710565429 ['ENSG00000169641|ENST00000302291|LUZP1'] 36170 21041 GVATVGLVSS True H1975_Epitope_Rep3 888.4916469026 888.49054993586 87.885 2 -0.21070426494567815 0.05376787421053618 0.6411413792247916 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant'] 67261 14387 LSRQLQVL True PC9_epitope_Rep2 955.58146496651 955.58036993586 60.601 2 -0.21080096489162195 0.05378359131966568 0.6413408540327009 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 74741 6642 NHANGLTL True PC9_epitope_Rep6 838.4297153523801 838.42860993586 34.277 2 -0.21081869884680227 0.05378359131966568 0.6413774102014493 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 128652 10628 VPVHDIYVSQ True PC9_epitope_Rep4 1155.59242357303 1155.5913299358601 48.631 2 -0.21084958586505387 0.05378359131966568 0.6414410605421405 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 62406 21620 LLGTIIQL True PC9_epitope_Rep1 869.55860426361 869.55750993586 87.987 2 -0.21088550294278746 0.053799306661669634 0.6415150460551096 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'ENST00000488988.5_1_3:52422617-52433783:+|nuORF', 'ENST00000486752.5_1_3:52422617-52434459:+|nuORF'] 41924 7813 IDCFRRVP True NCI_RA007_Epitope_Rep3 1004.5225701914 1004.52146993586 37.851 2 -0.21090842683198363 0.053799306661669634 0.641562249781686 ['nc|ENSG00000167984|Q7RTR2-3|NLRC3'] 28470 12910 FSDPVYAEAY True H1975_Epitope_Rep2 1160.5026055091198 1160.5015099358602 54.771 2 -0.2109244789470495 0.053799306661669634 0.6415952955448845 ['ENSG00000129083|ENST00000439561|COPB1'] 138729 17866 YIPTELDQV True PC9_epitope_Rep6 1076.53899101784 1076.53847496793 81.349 1 -0.2109407538679406 0.05381401187955555 0.6416287933049566 ['ENSG00000149100|ENST00000531120|EIF3M'] 79659 10968 PDRAYDAV True PC9_epitope_Rep1 905.4242956187699 905.42318993586 47.077 2 -0.21097415803758832 0.05381401187955555 0.6416975261656667 ['ENSG00000128266|ENST00000615612|GNAZ', 'GNAZ|p.E146Gfs*12|1|0.12|ENSG00000128266|chr22:23096132-23096132|A/-|frameshift_variant'] 60715 10646 LHQLYQYTLK True PC9_epitope_Rep6 1305.7081220316097 1305.7070299358602 51.768 2 -0.211022339563324 0.05381401187955555 0.6417966152099827 ['PLXNB2|p.Q1799L|1|0.27|ENSG00000196576|chr22:50275905-50275905|T/A|missense_variant'] 5877 5346 APGGFVHSA True PC9_epitope_Rep2 841.40825163181 841.40714993586 25.95 2 -0.21107467104081912 0.05381401187955555 0.6419041722203729 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 22043 8110 ESLKELHVF True NCI_RA007_Epitope_Rep3 1100.5866099165999 1100.58550993586 39.005 2 -0.21115138882530796 0.05383174067828368 0.6420617249612725 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2', 'nc|ENSG00000137501|Q9HCH5-4|SYTL2', 'nc|ENSG00000137501|Q9HCH5-9|SYTL2', 'nc|ENSG00000137501|Q9HCH5-2|SYTL2'] 37835 18951 GYISSAFLF True NCI_RA007_Epitope_Rep4 1003.5014833103099 1003.50097496793 81.967 1 -0.2112838794110323 0.053847450958349724 0.642333465463764 ['ENSG00000131471|ENST00000308423|AOC3', 'nc|ENSG00000131471|Q16853-2|AOC3'] 30295 13168 GAAGGFLL True NCI_RA007_Epitope_Rep1 704.38572528208 704.3851749679301 55.218 1 -0.2112844746053468 0.053847450958349724 0.6423346852156291 ['ENSG00000119946|ENST00000356713|CNNM1', 'nc|ENSG00000119946|Q9NRU3-2|CNNM1', 'CNNM1|p.G311Afs*51|1|0.38|ENSG00000119946|chr10:99330315-99330315|G/-|frameshift_variant'] 111111 6213 THEEAVAAM True PC9_epitope_Rep3 957.4225813666098 957.42148993586 28.938 2 -0.21130370856348263 0.053847450958349724 0.6423740971959141 ['ENSG00000169813|ENST00000682386|HNRNPF'] 109699 17712 TEDELTAQDIT True PC9_epitope_Rep1 1234.5564915567797 1234.5553899358601 72.924 2 -0.2113204856581441 0.053862150364389155 0.6424084672221358 ['nc|ENSG00000096070|Q9ULD4-3|BRPF3', 'nc|ENSG00000096070|Q9ULD4-2|BRPF3', 'ENSG00000096070|ENST00000357641|BRPF3'] 90767 23667 RERRYRERKLQ True PC9_epitope_Rep4 1588.9022390065995 1588.90114993586 99.381 2 -0.21134353110929557 0.053862150364389155 0.6424556671823303 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 82297 4070 PPHPPPPPP True NCI_RA007_Epitope_Rep3 931.49158733295 931.49048993586 22.508 2 -0.2113674914871695 0.053862150364389155 0.6425047267986093 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 604 3621 AARSDALAA True NCI_RA007_Epitope_Rep4 844.4402800360799 844.43918993586 19.996 2 -0.2113769466937513 0.053862150364389155 0.6425240826367798 ['ZIC4|p.A92V|1|0.14|ENSG00000174963|chr3:147396265-147396265|G/A|missense_variant', 'ZIC4|p.G100Afs*2|1|0.5|ENSG00000174963|chr3:147396241-147396241|C/-|frameshift_variant', 'nc|ENSG00000174963|Q8N9L1-2|ZIC4', 'ENSG00000174963|ENST00000383075|ZIC4', 'nc|ENSG00000174963|Q8N9L1-5|ZIC4', 'nc|ENSG00000174963|Q8N9L1-3|ZIC4', 'ENST00000493664.5_1_3:147108719-147114575:-|nuORF'] 78412 21964 NYLPFIMEL True PC9_epitope_Rep6 1138.57326835158 1138.57216993586 97.405 2 -0.21144912542571392 0.05389760017984601 0.642671765984605 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 102024 4321 SLQSSETHPP True H1975_Epitope_Rep3 1081.50400249145 1081.50290993586 21.737 2 -0.21147689804400266 0.05389760017984601 0.6427285559153184 ['ENSG00000121570|ENST00000335658|DPPA4'] 25743 6081 FESTSGVSA True H1975_Epitope_Rep3 883.3923267841499 883.39122993586 28.403 2 -0.21152349448344207 0.053915324091420004 0.6428237934263697 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 92100 8508 RKYREWYEKYY True NCI_RA007_Epitope_Rep1 1682.8205260148995 1682.81887490379 37.094 3 -0.21160904803640634 0.0539320370162227 0.6429985121303677 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 87679 11609 QQVFIEMTL True PC9_epitope_Rep4 1107.56343194387 1107.5623299358601 52.414 2 -0.21161731039845644 0.0539320370162227 0.6430153758850123 ['ENSG00000166866|ENST00000300119|MYO1A'] 42247 9830 IDSYLRRELIY True H1975_Epitope_Rep1 1439.77726422059 1439.77616993586 42.74 2 -0.21171238968634823 0.053968491841972166 0.6432093122404297 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A', 'ENST00000460991.1_1_2:85066267-85069119:-|nuORF'] 2779 9181 AETSPAPIP True H1975_Epitope_Rep3 881.44944773745 881.4488949679301 40.305 1 -0.21179874746294106 0.05402367750636895 0.6433852620790022 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 167 13641 AADPVSPLL True NCI_RA007_Epitope_Rep5 881.4858332461699 881.48472993586 59.153 2 -0.2118295702450399 0.05404139739627236 0.6434480166637495 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 60212 15485 LGPRLVLA True PC9_epitope_Rep2 837.5436229058099 837.54252993586 64.839 2 -0.21193609519449325 0.05407784812497658 0.6436647158325053 ['ENSG00000170348|ENST00000303575|TMED10'] 125021 14597 VICNNAVIE True PC9_epitope_Rep3 973.4902670036099 973.48916993586 61.275 2 -0.2119613589795268 0.054133028639931066 0.6437160671348867 ['ENSG00000070785|ENST00000360403|EIF2B3'] 110537 18083 TFLSSSPEFLW True PC9_epitope_Rep2 1312.63395403184 1312.6328499358601 74.858 2 -0.21209515069026505 0.054166432544810926 0.6439877464159577 ['ENST00000508622.1_1_4:130017347-130021853:+|nuORF'] 70227 12420 LVQPPPASTI True NCI_RA007_Epitope_Rep4 1021.5807962601699 1021.57968993586 54.775 2 -0.2121213619158512 0.054166432544810926 0.6440409188223588 ['nc|ENSG00000089101|Q8NHU2-6|CFAP61', 'nc|ENSG00000089101|Q8NHU2-4|CFAP61', 'ENSG00000089101|ENST00000245957|CFAP61'] 55941 12220 LARIGEIAA True PC9_epitope_Rep5 912.5392658013599 912.53816993586 51.991 2 -0.21216451374773812 0.054166432544810926 0.6441284197351211 ['ENST00000587327.5_1_19:11546705-11546834:+|nuORF'] 99791 15212 SIKDLLQTV True PC9_epitope_Rep4 1015.5913609438701 1015.59026993586 66.437 2 -0.21218719083592139 0.054166432544810926 0.6441743844376963 ['ENSG00000132855|ENST00000371129|ANGPTL3', 'ANGPTL3|p.D184E|1|0.37|ENSG00000132855|chr1:62598752-62598752|C/A|missense_variant'] 142298 12558 YYDKHFTEF True PC9_epitope_Rep2 1248.54513902744 1248.54349490379 53.611 3 -0.2122291438458004 0.0541841474378184 0.6442593860834029 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 91890 2598 RKKYMRWMNHK True NCI_RA007_Epitope_Rep5 1576.82312638088 1576.82093987172 14.711 4 -0.2122659307822672 0.05419881639074088 0.6443338845139063 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 101510 9553 SLLDVSFCSQ True H1975_Epitope_Rep1 1097.50631099057 1097.5052099358602 41.67 2 -0.21227423257093708 0.05419881639074088 0.6443506920680826 ['ENSG00000112234|ENST00000369244|FBXL4'] 30695 13399 GALEPHINAQI True PC9_epitope_Rep4 1161.61422164677 1161.6131299358601 59.44 2 -0.2122842805624331 0.05419881639074088 0.6443710326327373 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 99953 12511 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.55090993586 53.164 2 -0.212290363284902 0.05419881639074088 0.6443833449156358 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 11473 12126 DFEYSTQSY True H1975_Epitope_Rep1 1138.44548455582 1138.44438993586 51.659 2 -0.21231476968022747 0.05421449839884642 0.644432737602031 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'ELP3-PNOC|1|fusion', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 130710 8061 VSVKEDIGI True NCI_RA007_Epitope_Rep4 958.5335117145798 958.53240993586 37.785 2 -0.21232581016116978 0.05421449839884642 0.6444550760067038 ['nc|ENSG00000151632|P52895-2|AKR1C2', 'chr10:5000460-5000550|160|15.68|0.77|4.35|-|0|AKR1C2,AKR1C2|1'] 117742 10009 TVVGKTYGL True PC9_epitope_Rep4 936.5280324113198 936.52692993586 46.162 2 -0.21238026151933465 0.05421449839884642 0.6445652039840329 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 37399 20449 GVSTITATSL True PC9_epitope_Rep3 948.51277627 948.51166993586 83.913 2 -0.21239672044898278 0.05422916315562796 0.6445984776625132 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17'] 60308 10456 LGSFGRELHLP True H1975_Epitope_Rep2 1224.6615061923599 1224.6604099358601 45.234 2 -0.212406104984028 0.05422916315562796 0.6446174465931699 ['ENST00000359232.7_1_14:100758430-100758577:-|nuORF'] 125364 13358 VIRDKDYHL True PC9_epitope_Rep5 1157.61930702721 1157.61766490379 56.395 3 -0.21240955467754358 0.05422916315562796 0.6446244188963952 ['ENSG00000046889|ENST00000288368|PREX2', 'ENST00000517617.1_1_8:68864752-69023167:+|nuORF', 'nc|ENSG00000046889|Q70Z35-3|PREX2', 'ENST00000529398.5_1_8:68864629-69017594:+|nuORF', 'nc|ENSG00000046889|Q70Z35-4|PREX2'] 123904 4585 VGRRRYSDR True NCI_RA007_Epitope_Rep4 1163.6271863723098 1163.62555490379 24.042 3 -0.21249026404310611 0.05422916315562796 0.6447874590493149 ['ENST00000431532.6_2_1:86174040-86174079:-|nuORF'] 120537 11040 VEFSIDSVA True H1975_Epitope_Rep1 965.4705771048499 965.46948993586 47.428 2 -0.21255216242949893 0.05426559808254063 0.644912389557869 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000412120.2_1_1:1853728-1858343:-|nuORF', 'ENST00000464311.5_1_1:1853728-1858229:-|nuORF'] 59150 6684 LFAAGAEK True NCI_RA007_Epitope_Rep1 805.43340375049 805.43230993586 30.01 2 -0.2126074315781297 0.0542833068064788 0.6450238597077511 ['ENSG00000090863|ENST00000422840|GLG1', 'nc|ENSG00000090863|Q92896-3|GLG1', 'nc|ENSG00000090863|Q92896-2|GLG1', 'GLG1|p.C190Yfs*35|1|0.08|ENSG00000090863|chr16:74503736-74503737|-/AT|frameshift_variant'] 1255 15191 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 63.589 1 -0.21272163206969155 0.054352099754732174 0.6452539459355383 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.G900V|1|0.38|ENSG00000122218|chr1:160293441-160293441|C/A|missense_variant'] 45283 10160 IPVVCHLP True H1975_Epitope_Rep2 876.4891448047999 876.48804993586 44.082 2 -0.2127491012848648 0.054352099754732174 0.6453092414711347 ['ENSG00000016391|ENST00000315251|CHDH'] 110988 4466 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 24.362 2 -0.2127541327815076 0.054352099754732174 0.6453193678485565 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 112126 8309 TIYCNVEPS True H1975_Epitope_Rep3 1024.4535471417198 1024.4524499358602 36.945 2 -0.21276339416463283 0.054352099754732174 0.6453380056448811 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 9892 18900 AYLKGTVLF True PC9_epitope_Rep2 1010.5800679841799 1010.5794749679301 78.063 1 -0.21281864315892568 0.054352099754732174 0.6454491457070369 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 138911 12307 YKILAMVL True NCI_RA007_Epitope_Rep4 949.5670607723299 949.56596993586 54.333 2 -0.21284614229506743 0.054352099754732174 0.645504435389985 ['LMBRD2|p.V391M|1|0.18|ENSG00000164187|chr5:36117866-36117866|C/T|missense_variant'] 77222 7601 NRVEVGKDQEF True PC9_epitope_Rep5 1319.6469783270297 1319.64532490379 34.186 3 -0.2129714772008971 0.05436776874976598 0.6457561964894607 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 125076 11926 VIDWHNYGY True H1975_Epitope_Rep3 1165.51925863277 1165.5181699358602 51.027 2 -0.2129725450666059 0.05436776874976598 0.6457583398506631 ['nc|ENSG00000033011|Q9BT22-2|ALG1', 'ENSG00000033011|ENST00000262374|ALG1', 'ALG1|p.N171Tfs*21|1|0.14|ENSG00000033011|chr16:5075504-5075504|C/-|frameshift_variant'] 93305 7781 RPRVTEPISA True PC9_epitope_Rep3 1124.6302060640799 1124.62855490379 34.924 3 -0.21299319133089087 0.05436776874976598 0.6457997743581805 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 79015 12343 PALALTAA True PC9_epitope_Rep1 726.42759009406 726.4270449679301 52.335 1 -0.21303080669195845 0.05438241791156539 0.6458752366951626 ['ENST00000375446.4_1_9:95883958-95884504:-|nuORF'] 79135 4854 PALPPQAH True PC9_epitope_Rep6 829.44463714053 829.44354993586 26.191 2 -0.2130696988611587 0.05438241791156539 0.6459532237920872 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 15517 11952 EANLQALIAT True H1975_Epitope_Rep2 1042.56587447202 1042.56476993586 51.051 2 -0.21310481661176583 0.05438241791156539 0.646023610319255 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENSG00000175520|ENST00000311659|UBQLN3', 'ENSG00000160803|ENST00000368309|UBQLN4'] 86601 15360 QLEGLNWL True PC9_epitope_Rep5 971.5076313199099 971.50652993586 64.092 2 -0.2131062047821137 0.05438241791156539 0.6460263920050746 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000173575|O14647-3|CHD2', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000116254|ENST00000262450|CHD5'] 35100 7412 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 35.859 2 -0.21318934456306157 0.05441883973866976 0.6461929051021671 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 45968 12825 ISERQAEVL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 54.352 2 -0.21323823098269 0.05443654062149008 0.646290735783728 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 120461 18982 VEERNLLSV True PC9_epitope_Rep5 1057.57677350889 1057.57566993586 78.04 2 -0.21327959099199825 0.054443030393771526 0.6463734588154729 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 116492 19040 TTPIKLLAV True PC9_epitope_Rep1 954.6113681124599 954.61026993586 78.028 2 -0.2132839552622097 0.054443030393771526 0.6463821852197646 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 134045 14458 VYKAFVDNY True PC9_epitope_Rep3 1117.54441075145 1117.5433099358602 60.718 2 -0.21329230109197367 0.054443030393771526 0.6463988714901837 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 109593 12486 TDYWPQEDP True H1975_Epitope_Rep2 1149.46146897313 1149.4603699358602 53.118 2 -0.21333719291228143 0.054443030393771526 0.6464885967679358 ['MPP4|p.E252D|1|0.3|ENSG00000082126|chr2:201681011-201681011|C/A|missense_variant'] 55274 6015 LADPSAKAV True PC9_epitope_Rep5 870.4810822188999 870.47998993586 28.13 2 -0.21337161652225356 0.054443030393771526 0.6465573656899491 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 33569 14694 GLESTYLF True PC9_epitope_Rep1 928.45419876472 928.45310993586 61.342 2 -0.213396855969186 0.054443030393771526 0.6466077686841525 ['ENST00000373109.6_1_10:73820245-73820362:-|nuORF'] 124822 9321 VHGPPVQL True PC9_epitope_Rep6 845.47593726881 845.47484993586 46.024 2 -0.213432688593235 0.054443030393771526 0.646679299316996 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 40530 7680 HRETSMVHEL True PC9_epitope_Rep5 1237.5873552759301 1237.58569490379 34.486 3 -0.213511073508876 0.054443030393771526 0.6468356648606146 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF'] 44357 15588 ILEFFGLK True H1975_Epitope_Rep3 965.5586042636098 965.55750993586 65.376 2 -0.21352661691781255 0.054443030393771526 0.6468666536139516 ['ENSG00000185624|ENST00000331483|P4HB'] 64970 13608 LQFDKAINA True PC9_epitope_Rep5 1018.5447451046199 1018.54364993586 57.365 2 -0.21357153444651933 0.054443030393771526 0.6469561720168514 ['ENSG00000140307|ENST00000396060|GTF2A2'] 116551 6226 TTVGKGVTTV True PC9_epitope_Rep3 961.54441075145 961.54330993586 28.986 2 -0.2136531888533425 0.054443030393771526 0.6471187786812799 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2'] 11605 20245 DGFSQLLNL True PC9_epitope_Rep3 1005.5131106231698 1005.51200993586 83.132 2 -0.2136561043664086 0.054443030393771526 0.6471245816205705 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN'] 78623 9160 NYSTVPQKQTL True PC9_epitope_Rep5 1277.6615657620098 1277.6604699358602 40.181 2 -0.213722295598158 0.05447944154361537 0.6472562705097303 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 135223 5437 WFFFQRHKLK True NCI_RA007_Epitope_Rep2 1435.7877097649896 1435.78606490379 25.768 3 -0.2137684277512434 0.05449713665456451 0.6473479881225038 ['ENSG00000174567|ENST00000308302|GOLT1A'] 71151 20114 LYLTATHLL True PC9_epitope_Rep5 1043.60153170475 1043.6004299358601 82.415 2 -0.21381785094945333 0.05451279076295451 0.6474461911744366 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 102666 4567 SLYHSRMK True NCI_RA007_Epitope_Rep5 1020.5174848109599 1020.51638993586 24.227 2 -0.21382568199115612 0.05451279076295451 0.647461745850337 ['ENSG00000089558|ENST00000264661|KCNH4'] 15060 15152 DYQITASRI True PC9_epitope_Rep1 1065.54547338061 1065.54436993586 63.103 2 -0.21383567817360977 0.05451279076295451 0.6474815989379892 ['EDIL3|p.S339R|1|0.09|ENSG00000164176|chr5:84060420-84060420|G/T|missense_variant'] 109028 20663 TAIELIPSV True PC9_epitope_Rep4 941.5433481222899 941.54224993586 87.639 2 -0.21386181602667212 0.05452946350043975 0.6475334989472714 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 134403 20123 VYPGLAVFF True NCI_RA007_Epitope_Rep4 1011.5429541994698 1011.5423749679301 87.063 1 -0.21387167133334575 0.05452946350043975 0.6475530635791384 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 14978 13019 DYFPEPVT True NCI_RA007_Epitope_Rep3 966.4334633201399 966.43236993586 58.481 2 -0.21400016221193918 0.05456280523174223 0.6478079255297919 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 74432 6247 NETNVTENYE True NCI_RA007_Epitope_Rep5 1211.4942256533898 1211.49312993586 30.706 2 -0.21402931402934808 0.05456280523174223 0.64786569229264 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 22596 17368 ETLLECYYAYY True H1975_Epitope_Rep2 1429.61116998193 1429.61006993586 72.099 2 -0.21403267671175327 0.05456280523174223 0.6478723543992232 ['F2R|p.G265C|1|0.66|ENSG00000181104|chr5:76733018-76733018|G/T|missense_variant'] 5430 7179 ALTSSVIS True NCI_RA007_Epitope_Rep2 776.42798401688 776.42743496793 32.546 1 -0.2140474399956529 0.05456280523174223 0.6479015999889696 ['ENST00000358932.8_1_14:20784504-20793722:-|nuORF', 'ENST00000398169.7_1_14:20784507-20786020:-|nuORF'] 9253 9120 AVPEPSEDP True PC9_epitope_Rep1 939.41854153199 939.41744993586 39.931 2 -0.21424048136478835 0.054630495790458374 0.6482835215042593 ['nc|ENSG00000187867|A6NDB9|PALM3', 'ENSG00000187867|ENST00000669674|PALM3'] 102341 11471 SLSSVVTVPS True NCI_RA007_Epitope_Rep4 974.52842633414 974.5278749679301 51.056 1 -0.21429354777740445 0.054630495790458374 0.6483883520107002 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 27380 12862 FLVGEGAV True H1975_Epitope_Rep1 790.4225047136199 790.4219549679301 54.542 1 -0.2142994973375256 0.054630495790458374 0.6484001008675088 ['ENSG00000204950|ENST00000378075|LRRC10B'] 96472 16036 SAAMVFSAL True NCI_RA007_Epitope_Rep5 895.4473395624699 895.44624993586 68.41 2 -0.2143069050141452 0.054630495790458374 0.6484147279325564 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 48301 8049 IYQRHVYNL True PC9_epitope_Rep2 1204.6352914445197 1204.6336349037902 36.321 3 -0.21434223278785258 0.054630495790458374 0.6484844672407082 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 52387 9375 KKLPPLPSL True NCI_RA007_Epitope_Rep4 991.64300259391 991.64190993586 42.916 2 -0.21437626975192103 0.054630495790458374 0.6485516298341433 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 61234 21736 LIMLVLKLD True PC9_epitope_Rep3 1056.66168943316 1056.6605899358601 88.901 2 -0.21440350083857987 0.054630495790458374 0.6486053427176511 ['ENSG00000135211|ENST00000257663|TMEM60'] 139316 16133 YLKNSVMEL True PC9_epitope_Rep4 1095.56343194387 1095.5623299358601 69.996 2 -0.21446534252373872 0.05466586844271496 0.6487272578641564 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 42830 6734 IEQELTSKQG True H1975_Epitope_Rep1 1131.57716743171 1131.57606993586 30.943 2 -0.21446655220015945 0.05466586844271496 0.6487296417074185 ['nc|ENSG00000141376|Q9H6U6-6|BCAS3', 'ENSG00000141376|ENST00000407086|BCAS3', 'nc|ENSG00000141376|Q9H6U6|BCAS3', 'nc|ENSG00000141376|Q9H6U6-7|BCAS3', 'nc|ENSG00000141376|Q9H6U6-3|BCAS3', 'nc|ENSG00000141376|Q9H6U6-8|BCAS3'] 78807 7033 PAASVPTPEVP True NCI_RA007_Epitope_Rep2 1063.55497543515 1063.5538699358601 31.979 2 -0.21458002508908083 0.054681507810307735 0.6489530994322454 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 127364 19626 VMVLARTEL True PC9_epitope_Rep2 1030.58450174162 1030.5834099358601 80.876 2 -0.21460275551765232 0.054681507810307735 0.6489978242278803 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'nc|ENSG00000142303|Q9H324-2|ADAMTS10'] 98641 15869 SFYPEEVSSI True PC9_epitope_Rep1 1156.52882025696 1156.5277299358602 65.85 2 -0.2146831425705254 0.054681507810307735 0.6491558953343513 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 31901 14586 GELTMTFPA True H1975_Epitope_Rep2 965.4528188657299 965.4522749679301 61.261 1 -0.2147631970045372 0.05469816862150888 0.6493131577585332 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 107297 23149 SVLDLVVAL True PC9_epitope_Rep4 927.56408356687 927.5635349679301 97.263 1 -0.21478488447644012 0.05469816862150888 0.6493557350356735 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 35576 12016 GTADALGL True NCI_RA007_Epitope_Rep2 716.37046914076 716.36992496793 51.33 1 -0.21486719325313205 0.05475326424482772 0.6495172224109297 ['ENSG00000100151|ENST00000356976|PICK1', 'nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 88904 8504 QVEQQIQK True H1975_Epitope_Rep1 999.5349086969098 999.53437496793 37.641 1 -0.21491634497152798 0.05477094595858508 0.6496135790419463 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 89250 16626 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48506993586 76.416 2 -0.21498047104122414 0.05482398713104635 0.6497392041423677 ['ENSG00000167658|ENST00000309311|EEF2'] 46213 9469 ISNEFKVEV True PC9_epitope_Rep6 1063.5549754351498 1063.5538699358601 46.662 2 -0.21500257113169757 0.05482398713104635 0.6497824761132729 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 141695 15231 YTTWKLTL True PC9_epitope_Rep6 1024.5593325395998 1024.55822993586 70.685 2 -0.21500841208622778 0.05482398713104635 0.6497939107454107 ['ENSG00000163885|ENST00000352312|CFAP100', 'nc|ENSG00000163885|Q494V2-2|CFAP100'] 103001 14748 SPFGTITSA True PC9_epitope_Rep6 879.43379767331 879.43324496793 68.676 1 -0.21503939429611443 0.054840640430944186 0.6498545498692812 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC3|p.V325Lfs*2|1|0.04|ENSG00000151846|chr13:25097170-25097170|G/-|frameshift_variant'] 76154 11211 NMYGKVVTV True PC9_epitope_Rep4 1009.52665251233 1009.52554993586 50.9 2 -0.21510793783305254 0.054840640430944186 0.6499886232666888 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 34542 10157 GPSGLLTYT True H1975_Epitope_Rep1 907.4650978015901 907.46400993586 44.008 2 -0.21517968375725616 0.054863682261864694 0.6501288402681175 ['ENSG00000159348|ENST00000367249|CYB5R1'] 106653 15973 STTGMLTGV True PC9_epitope_Rep1 865.42151873745 865.4209649679301 66.247 1 -0.21518170773309162 0.054863682261864694 0.6501327940510416 ['ENSG00000066084|ENST00000301180|DIP2B'] 27655 18276 FPFAPPAAA True PC9_epitope_Rep6 887.4541391950698 887.45304993586 82.94 2 -0.21520030434476595 0.054863682261864694 0.6501691174566737 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 26907 15222 FLDGNEMTL True NCI_RA007_Epitope_Rep5 1038.46919720586 1038.46867496793 65.234 1 -0.21523917396743825 0.054863682261864694 0.6502450119850796 ['ENSG00000169504|ENST00000374379|CLIC4'] 95853 15972 RYKLYQEMF True PC9_epitope_Rep2 1276.6274291827597 1276.62577490379 66.69 3 -0.21531192359764992 0.054863682261864694 0.6503869617208397 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 118582 21162 TYQVLAVTF True PC9_epitope_Rep4 1040.5542471591598 1040.55367496793 89.563 1 -0.2153400312721418 0.054863682261864694 0.650441771867824 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 58083 15633 LEIRSMQLR True PC9_epitope_Rep1 1144.6386625728 1144.63756993586 64.951 2 -0.21535059478036395 0.054863682261864694 0.6504623659092514 ['LINGO4|p.V474M|1|0.3|ENSG00000213171|chr1:151801285-151801285|C/T|missense_variant'] 58821 18554 LESQAVEAL True PC9_epitope_Rep3 958.4971262058599 958.49602993586 76.587 2 -0.21537720621778644 0.054863682261864694 0.6505142343365424 ['nc|ENSG00000170579|O14490-7|DLGAP1', 'ENSG00000170579|ENST00000315677|DLGAP1', 'nc|ENSG00000170579|O14490-3|DLGAP1', 'nc|ENSG00000170579|O14490-2|DLGAP1', 'nc|ENSG00000170579|O14490-4|DLGAP1', 'nc|ENSG00000170579|O14490-6|DLGAP1', 'ENST00000485480.5_1_18:3680126-3742463:-|nuORF', 'ENST00000478161.5_1_18:3722450-3874706:-|nuORF', 'nc|ENSG00000170579|O14490-5|DLGAP1'] 43370 17459 IGAGLSVVS True PC9_epitope_Rep4 801.4596184983301 801.4590749679301 75.154 1 -0.2153796155140743 0.054863682261864694 0.6505189294699647 ['nc|ENSG00000164124|Q7Z5S9-2|TMEM144', 'ENSG00000164124|ENST00000296529|TMEM144'] 96412 5978 SAAEESPPP True H1975_Epitope_Rep2 883.3923267841499 883.39122993586 27.973 2 -0.21540203866186275 0.054863682261864694 0.650562620110237 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 112287 6022 TKSKTVYSILR True PC9_epitope_Rep5 1294.76088588046 1294.7592449037902 28.157 3 -0.2154257958382789 0.054863682261864694 0.6506088969944859 ['ENSG00000134001|ENST00000256383|EIF2S1'] 83422 15660 PTLSSSPEI True PC9_epitope_Rep4 929.47057710485 929.46948993586 68.162 2 -0.21547973522290945 0.054863682261864694 0.650713916298585 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'ENST00000507162.1_1_5:82837792-82840785:+|nuORF'] 64037 16507 LPALAASP True PC9_epitope_Rep1 738.4275900940601 738.4270449679301 68.318 1 -0.21548576984758372 0.054863682261864694 0.6507256613331117 ['ENSG00000176678|ENST00000320241|FOXL1'] 79123 5213 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 26.752 2 -0.21549307289480582 0.054863682261864694 0.6507398739078514 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 134091 11584 VYKTIMEQF True NCI_RA007_Epitope_Rep3 1157.57908200801 1157.5779899358602 52.693 2 -0.21552547717220422 0.05488135529834141 0.6508029210885402 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 31629 13086 GEFGGFGSV True NCI_RA007_Epitope_Rep3 855.3762827971899 855.37518993586 58.756 2 -0.21558054357078846 0.05491156564334592 0.6509100034687479 ['RBBP7|p.H310Ifs*32|1|0.14|ENSG00000102054|chrX:16852586-16852586|G/-|frameshift_variant', 'ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 6844 22099 AQFPPEEWP True PC9_epitope_Rep2 1099.4974605590298 1099.49636993586 90.475 2 -0.21558863713421492 0.05491156564334592 0.6509257361815257 ['STOX1|p.Y782Lfs*9|1|0.29|ENSG00000165730|chr10:68886139-68886140|-/T|frameshift_variant', 'STOX1|p.L805Cfs*20|1|0.18|ENSG00000165730|chr10:68886206-68886206|G/-|frameshift_variant', 'ENSG00000165730|ENST00000298596|STOX1', 'STOX1|p.G417Vfs*55|1|0.25|ENSG00000165730|chr10:68885044-68885044|G/-|frameshift_variant', 'nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 57882 20255 LEFMTNSSL True PC9_epitope_Rep2 1040.48484727 1040.48374993586 83.332 2 -0.21560244892898983 0.05491156564334592 0.6509525807156521 ['ENST00000505025.1_1_4:184908904-184909039:+|nuORF'] 1399 4907 AEEEGVPRP True H1975_Epitope_Rep2 982.4719740871798 982.47086993586 23.958 2 -0.21560709835216754 0.05491156564334592 0.6509616162924101 ['ENSG00000142235|ENST00000600059|LMTK3'] 119670 11125 VAVERLKE True PC9_epitope_Rep4 942.5498304850598 942.54872993586 50.569 2 -0.21561185243372363 0.05491156564334592 0.6509708547293339 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 99446 15781 SIALCWEVP True PC9_epitope_Rep3 1016.50010341132 1016.49900993586 65.859 2 -0.2156767632413073 0.05491156564334592 0.6510969399541752 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF', 'nc|ENSG00000080031|Q9HD43-3|PTPRH'] 115438 14721 TRMPDGPVAL True PC9_epitope_Rep1 1055.54336520563 1055.54277496793 61.446 1 -0.21570975326718209 0.05491156564334592 0.6511609827541539 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 23969 18581 EYLTKWPKF True PC9_epitope_Rep5 1210.6386454894598 1210.63699490379 76.496 3 -0.21579556698858887 0.05494690397846246 0.6513274502906021 ['ENSG00000184575|ENST00000332707|XPOT', 'XPOT|p.G138Efs*2|1|0.17|ENSG00000184575|chr12:64419015-64419015|G/-|frameshift_variant', 'XPOT|p.K328Sfs*6|1|0.09|ENSG00000184575|chr12:64421373-64421374|-/GTGCT|frameshift_variant'] 116628 17057 TVAILPLFL True PC9_epitope_Rep6 985.62120452017 985.62010993586 78.174 2 -0.2158186864141577 0.05494690397846246 0.6513722691908463 ['ENSG00000091262|ENST00000205557|ABCC6', 'ENST00000456970.6_1_16:16251574-16267200:-|nuORF'] 64558 14218 LPSDIAAEA True PC9_epitope_Rep5 885.4443623570099 885.44326993586 59.695 2 -0.21582874461482202 0.054964572155022526 0.6513917638907345 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 10684 17594 CQSMNILTSV True PC9_epitope_Rep5 1094.51001647202 1094.5089099358602 72.683 2 -0.21589823817463683 0.05497915615127213 0.6515263902507428 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 125151 15058 VIGPPVVL True H1975_Epitope_Rep2 792.5109257952 792.50982993586 63.072 2 -0.21590544688117191 0.05497915615127213 0.6515403487819995 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2', 'ECT2|p.R147T|1|0.06|ENSG00000114346|chr3:172757119-172757119|G/C|missense_variant'] 136424 18988 WVDETLSSV True PC9_epitope_Rep4 1034.49204082542 1034.49147496793 81.129 1 -0.2159389776578519 0.05497915615127213 0.6516052597531908 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 23354 14821 EVRLLKYLF True PC9_epitope_Rep2 1179.70158009919 1179.6999449037899 62.272 3 -0.21593902927537906 0.05497915615127213 0.6516053596571634 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 53074 4939 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 24.091 2 -0.21596741612338585 0.05499682207350357 0.651660291913375 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 21404 5529 ERIMKAQAL True PC9_epitope_Rep6 1058.5906497512199 1058.58954993586 29.274 2 -0.21599057008329878 0.05501037402568272 0.6517050837715427 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 15597 4317 EARERRREQP True H1975_Epitope_Rep2 1325.6912431808498 1325.68960490379 21.715 3 -0.216014634707603 0.05501037402568272 0.6517516239327728 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000461374.1_1_22:25437297-25445586:+|nuORF', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 82913 13058 PSAPVPLAS True PC9_epitope_Rep1 837.45961849833 837.45852993586 55.095 2 -0.216028871854221 0.05501037402568272 0.6517791516605025 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 41298 23626 HVSLPLHA True NCI_RA007_Epitope_Rep3 872.48683630568 872.48572993586 102.47 2 -0.21603131914390317 0.05501037402568272 0.6517838830491316 ['nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF', 'ENSG00000163867|ENST00000357182|ZMYM6'] 25770 6515 FETLQEKAQ True H1975_Epitope_Rep3 1092.5451390274397 1092.5440499358601 30.029 2 -0.21605747489049942 0.05501037402568272 0.6518344416047503 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'ENST00000586709.1_1_18:21478707-21479460:+|nuORF'] 102826 10885 SNPPAEYF True H1975_Epitope_Rep3 923.4024975450301 923.40140993586 46.953 2 -0.2162229795054322 0.05504672897196262 0.6521539855294908 ['ENSG00000183668|ENST00000270077|PSG9', 'nc|ENSG00000183668|Q00887-2|PSG9'] 102319 9472 SLSREVAVV True PC9_epitope_Rep1 958.5447451046198 958.54364993586 41.29 2 -0.21627024555372124 0.0550830825592045 0.6522451250762298 ['ENSG00000188112|ENST00000341865|C6orf132'] 26904 14666 FLDGNEMTL True NCI_RA007_Epitope_Rep3 1038.46919720586 1038.46867496793 65.067 1 -0.21637885518464045 0.05510074389742439 0.652454350186386 ['ENSG00000169504|ENST00000374379|CLIC4'] 118425 12705 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47107496793 60.348 1 -0.21644524073979318 0.055117374401913874 0.6525820988928838 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 89380 7359 QWWKKRRRR True NCI_RA007_Epitope_Rep4 1398.8221382110999 1398.82048490379 34.946 3 -0.21644810194341285 0.055117374401913874 0.6525876025161435 ['ENST00000324344.8_1_16:20911624-20911678:-|nuORF'] 11475 12089 DFEYSTQSY True H1975_Epitope_Rep3 1138.44548455582 1138.44438993586 51.665 2 -0.21650513942427074 0.05513503410896178 0.6526972760989225 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'ELP3-PNOC|1|fusion', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 72781 17322 MPAGSFITA True PC9_epitope_Rep4 893.43168949833 893.4311449679301 74.636 1 -0.21663414426237804 0.055184915251069874 0.6529450504620565 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF'] 132443 7191 VVAWAARR True PC9_epitope_Rep1 927.5402688608699 927.53916993586 32.473 2 -0.2166406896842992 0.055184915251069874 0.6529576116314924 ['ENST00000354619.9_1_1:236433277-236445243:-|nuORF'] 13491 10376 DNKRYRYAYHR True H1975_Epitope_Rep1 1540.7647424742802 1540.76308490379 44.861 3 -0.21664852590137967 0.055184915251069874 0.6529726486218631 ['ENSG00000164532|ENST00000408931|TBX20', 'ENST00000492961.1_1_7:35271114-35293240:-|nuORF'] 108036 18354 SYADQMFLL True NCI_RA007_Epitope_Rep3 1086.50558271458 1086.5050749679299 80.375 1 -0.21669279902895622 0.055184915251069874 0.6530575778403666 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 76239 16400 NPEGLLNLV True H1975_Epitope_Rep3 967.53384606775 967.53329496793 68.556 1 -0.21671214526019195 0.055184915251069874 0.6530946754041167 ['nc|ENSG00000165185|Q8N8K9-2|KIAA1958'] 9057 21631 AVIAGLYLLL True PC9_epitope_Rep4 1044.65831830488 1044.6572299358602 91.396 2 -0.21672776987216344 0.055184915251069874 0.6531246301728953 ['ENSG00000155066|ENST00000317620|PROM2', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'ENST00000487138.5_1_2:95940333-95943144:+|nuORF', 'ENST00000431567.5_1_2:95941253-95943708:+|nuORF'] 103032 12640 SPFRVNVGA True PC9_epitope_Rep3 945.5032146458099 945.50210993586 53.642 2 -0.21673366962530327 0.05519844532476269 0.6531359394220904 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 57018 16047 LDRNRLGGF True PC9_epitope_Rep6 1046.5621265042598 1046.56102993586 74.049 2 -0.2167374066782702 0.05519844532476269 0.6531431025673615 ['ENSG00000204950|ENST00000378075|LRRC10B'] 132479 15910 VVDGNFEEV True PC9_epitope_Rep1 1006.46074069714 1006.46017496793 66.008 1 -0.21681236250978075 0.05519844532476269 0.6532867084697027 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 57966 13090 LEGSGTIIA True H1975_Epitope_Rep1 859.46509780159 859.46454496793 55.439 1 -0.21682140019188556 0.05519844532476269 0.6533040146906303 ['ENST00000601033.1_1_19:46531262-46531590:+|nuORF'] 107549 7892 SVPEEFHTT True PC9_epitope_Rep4 1045.47163973401 1045.4705499358602 37.786 2 -0.21682334780618007 0.05519844532476269 0.6533077439203904 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 5897 7131 APGKGILAA True PC9_epitope_Rep2 796.4806882960798 796.47958993586 32.824 2 -0.216833941464853 0.05521403613669912 0.6533280267742877 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 59398 21508 LFLLSHEVL True PC9_epitope_Rep3 1069.61718176889 1069.6160899358601 88.025 2 -0.216852484443878 0.05521403613669912 0.6533635232868819 ['ENST00000466609.1_1_3:98377983-98378526:+|nuORF'] 80966 18868 PIGAVIII True H1975_Epitope_Rep2 794.5265758593399 794.5260249679301 78.336 1 -0.21686542292949837 0.05521403613669912 0.6533882864732997 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1'] 119325 14568 VANKVYLL True PC9_epitope_Rep4 918.5538532363398 918.55274993586 63.954 2 -0.21698083496226958 0.055229625200851985 0.653609003250448 ['ENSG00000257335|ENST00000475668|MGAM', 'nc|ENSG00000257335|O43451-1|MGAM'] 79105 6166 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 28.532 2 -0.2170560814346143 0.055229625200851985 0.6537527396962786 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 5699 7550 APAKSLVGQVA True PC9_epitope_Rep6 1039.6025943339098 1039.6014899358602 38.311 2 -0.21705912112111778 0.055229625200851985 0.6537585433669246 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 132693 8134 VVGVGQVGM[Oxidation]AC-[Carbamidomethyl] True H1975_Epitope_Rep1 1091.5103514850598 1091.50924993586 36.225 2 -0.21721702904188156 0.055247276871625284 0.6540597418054368 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 47293 23882 IVDPFQILV True PC9_epitope_Rep5 1042.60628273202 1042.6051899358602 96.844 2 -0.21724608900131107 0.055259765734461695 0.6541151086352964 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 64917 7658 LQEELAKLSEK True NCI_RA007_Epitope_Rep1 1286.7081816012599 1286.70652490379 33.781 3 -0.21725011670949956 0.055259765734461695 0.6541227809285344 ['ENST00000473581.5_1_X:48834665-48847670:-|nuORF', 'nc|ENSG00000068400|Q4V328-2|GRIPAP1', 'nc|ENSG00000068400|Q4V328-4|GRIPAP1', 'ENSG00000068400|ENST00000376423|GRIPAP1'] 103120 6187 SPHPGLVAA True PC9_epitope_Rep2 847.4552018242299 847.45410993586 29.188 2 -0.21729053321585032 0.055259765734461695 0.6541997486244959 ['ENSG00000100393|ENST00000263253|EP300'] 56644 21205 LDINFQEQP True PC9_epitope_Rep2 1102.5294889632999 1102.52838993586 87.023 2 -0.21734476118354815 0.055259765734461695 0.6543029588764256 ['ENST00000426595.1_1_7:55979573-55979666:+|nuORF'] 15161 9399 EAALEAAVLNK True H1975_Epitope_Rep3 1127.6186383208699 1127.61754993586 41.155 2 -0.2173850115222111 0.055259765734461695 0.6543795219282506 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 115344 11032 TRIGLINDM-[Oxidation] True PC9_epitope_Rep4 1047.53828020563 1047.5371899358602 50.211 2 -0.21739942959673889 0.055259765734461695 0.6544069384523992 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 142254 13529 YWRRREEEERW True NCI_RA007_Epitope_Rep2 1693.80733556225 1693.80622993586 57.266 2 -0.21746820048110543 0.05527741453390622 0.6545376427099361 ['ENSG00000056097|ENST00000265069|ZFR'] 20912 8053 EQLVRRVEI True NCI_RA007_Epitope_Rep3 1140.6615061923599 1140.65986490379 38.762 3 -0.21751844975335116 0.055313743438381496 0.6546330760379564 ['ENSG00000161800|ENST00000312377|RACGAP1', 'ENST00000550149.5_1_12:50399137-50419185:-|nuORF', 'ENST00000548247.1_1_12:50399137-50425547:-|nuORF'] 82400 22706 PPLQLQELF True H1975_Epitope_Rep3 1083.59644632431 1083.5953499358602 94.878 2 -0.2176207022764112 0.05534903704257187 0.6548270935177507 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000486282.6_1_1:110163774-110168851:+|nuORF'] 129475 17188 VRKEFFLL True NCI_RA007_Epitope_Rep4 1050.6226015025 1050.62150993586 74.429 2 -0.21764098796166206 0.05534903704257187 0.6548655555484639 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 26187 21189 FHDGFLLEV True PC9_epitope_Rep3 1075.53384606775 1075.53274993586 86.791 2 -0.2176657256288959 0.05536461446503287 0.6549124457508837 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF', 'CEP76|p.V235Cfs*17|1|0.48|ENSG00000101624|chr18:12697227-12697228|-/C|frameshift_variant'] 72777 17625 MPAGLIAGA True PC9_epitope_Rep3 799.42621019507 799.42510993586 72.985 2 -0.21766922386296314 0.05536461446503287 0.6549190755060654 ['ENST00000466421.5_1_6:10723434-10730896:+|nuORF', 'ENSG00000111843|ENST00000229563|TMEM14C'] 66645 9818 LSKPKANVSP True H1975_Epitope_Rep2 1039.6025943339098 1039.6014899358602 42.748 2 -0.21770721873230894 0.05536461446503287 0.6549910641101212 ['ENSG00000174373|ENST00000680220|RALGAPA1'] 108149 20278 SYFPEITHI True PC9_epitope_Rep1 1105.54441075145 1105.5433099358602 82.826 2 -0.2177694795466496 0.055398868114832175 0.65510895715653 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 79142 21053 PALQVSVAL True PC9_epitope_Rep3 896.5331177917599 896.53202993586 86.26 2 -0.21777015426018753 0.055398868114832175 0.6551102342602745 ['ENST00000586558.5_1_19:14523585-14524032:-|nuORF'] 96607 18440 SAGPEGLLGV True PC9_epitope_Rep6 898.4759968384599 898.47488993586 83.574 2 -0.21777757063864925 0.055398868114832175 0.6551242713544778 ['ENSG00000130935|ENST00000253247|NOL11', 'NOL11|p.L15M|1|0.25|ENSG00000130935|chr17:67717990-67717990|C/A|missense_variant', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 64255 13749 LPHGFTNMA True PC9_epitope_Rep3 986.4643866089401 986.46328993586 57.968 2 -0.21779864346925712 0.05541340604747586 0.6551641492995914 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 99133 12949 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.4914349679301 55.102 1 -0.21781609427078438 0.05541340604747586 0.6551971652088713 ['ENSG00000132646|ENST00000379143|PCNA'] 31900 14478 GELTMTFPA True H1975_Epitope_Rep1 965.4528188657299 965.4522749679301 60.889 1 -0.2178206712994373 0.05541340604747586 0.6552058235198638 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 37355 23035 GVSIALLGV True PC9_epitope_Rep1 827.5116540711899 827.51054993586 93.403 2 -0.21784175469275072 0.05541340604747586 0.655245700485674 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-3|CDCP1'] 56349 7044 LDDGNGGQF True NCI_RA007_Epitope_Rep5 921.38282472961 921.38172993586 33.773 2 -0.21790957314575782 0.05543104736291648 0.65537390225731 ['nc|ENSG00000100505|Q9C026-5|TRIM9', 'TRIM9|p.D613Efs*11|1|0.19|ENSG00000100505|chr14:50981868-50981869|-/T|frameshift_variant', 'nc|ENSG00000100505|Q9C026|TRIM9', 'ENSG00000100505|ENST00000684578|TRIM9', 'nc|ENSG00000100505|Q9C026-4|TRIM9'] 3885 11153 AHALPTTL True PC9_epitope_Rep1 822.4599528515001 822.45884993586 47.783 2 -0.217991014684766 0.055466328017032086 0.6555277165654021 ['ENSG00000130309|ENST00000252599|COLGALT1'] 83339 6911 PTEGSVPPP True H1975_Epitope_Rep2 879.4337976733099 879.43324496793 31.504 1 -0.21799118320871927 0.055466328017032086 0.6555280346892057 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4'] 12260 20753 DIKLFEGV True PC9_epitope_Rep2 919.5014833103098 919.50038993586 85.267 2 -0.21800956431032797 0.05547982297249351 0.6555627288921164 ['ENSG00000197275|ENST00000336148|RAD54B', 'RAD54B|p.D840Gfs*26|1|0.1|ENSG00000197275|chr8:94372384-94372385|-/ATAAC|frameshift_variant', 'nc|ENSG00000197275|Q9Y620-2|RAD54B'] 30922 6865 GAQSLQREL True NCI_RA007_Epitope_Rep5 1000.53015766964 1000.52906993586 33.088 2 -0.2180132865315006 0.05547982297249351 0.6555697536115701 ['ENST00000479606.5_1_22:21351676-21351817:+|nuORF'] 125430 6102 VITIESQK True NCI_RA007_Epitope_Rep2 916.5229470308801 916.52184993586 28.341 2 -0.21801435032288266 0.05547982297249351 0.6555717611810978 ['ENSG00000099381|ENST00000262519|SETD1A'] 129321 13878 VQYEGNINV True PC9_epitope_Rep4 1034.50327421546 1034.5021699358601 61.282 2 -0.21804072308156297 0.05547982297249351 0.6556215230847661 ['SLFN5|p.E282Kfs*34|1|0.15|ENSG00000166750|chr17:35259530-35259530|C/-|frameshift_variant', 'nc|ENSG00000166750|Q08AF3-2|SLFN5', 'ENSG00000166750|ENST00000299977|SLFN5'] 10903 5091 DAAEARDP True H1975_Epitope_Rep2 843.3722600459099 843.3711699358599 24.664 2 -0.2180499250439779 0.05547982297249351 0.6556388822007967 ['BEST2|p.A345D|1|0.34|ENSG00000039987|chr19:12756226-12756226|C/A|missense_variant'] 19947 9225 ELVNQGQAL True PC9_epitope_Rep6 970.5083595958998 970.50726993586 45.628 2 -0.2181117498280696 0.055495387832841615 0.6557554615241712 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3'] 82396 18748 PPLPPLPPP True PC9_epitope_Rep5 923.54803957991 923.54694993586 77.126 2 -0.21815068448659455 0.055495387832841615 0.6558288331626515 ['GLIS3|p.R396Ifs*4|1|0.13|ENSG00000107249|chr9:4117825-4117828|GCGG/-|frameshift_variant', 'nc|ENSG00000107249|Q8NEA6|GLIS3', 'ENSG00000107249|ENST00000381971|GLIS3', 'ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant'] 49058 4950 KEHQETIVP True H1975_Epitope_Rep2 1079.56112344475 1079.56002993586 24.123 2 -0.2181519466503411 0.055495387832841615 0.6558312111031869 ['ENSG00000062096|ENST00000381127|ARSF'] 103683 6502 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48159496793 29.813 1 -0.21820074988676744 0.055529622645032396 0.6559231292355591 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 44700 8627 ILTSIKKEY True H1975_Epitope_Rep1 1093.63831113629 1093.63720993586 38.11 2 -0.21821907394754422 0.055529622645032396 0.655957627425956 ['ENSG00000162994|ENST00000401408|CLHC1'] 32179 6626 GEVTAVEEA True H1975_Epitope_Rep3 903.41854153199 903.4179949679301 30.439 1 -0.2182582622968789 0.055529622645032396 0.6560313803204142 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 67611 6745 LSVLRPSQKT True PC9_epitope_Rep1 1127.66625721963 1127.6646149037902 30.75 3 -0.21835358793772347 0.055564891054724695 0.6562106369097596 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1', 'nc|ENSG00000138688|Q2LD37-5|BLTP1', 'ENST00000482114.1_1_4:123130334-123145991:+|nuORF'] 49618 6440 KGEFETGFEK True NCI_RA007_Epitope_Rep1 1170.5557037111396 1170.55460993586 29.071 2 -0.21835692693210063 0.055564891054724695 0.6562169119912468 ['nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'nc|ENSG00000103342|P15170|GSPT1', 'ENSG00000189369|ENST00000340438|GSPT2'] 27171 20801 FLLFPDMEA True NCI_RA007_Epitope_Rep5 1081.5154191222898 1081.5143299358601 86.991 2 -0.21850677474232993 0.055575260888233426 0.6564982625265253 ['ENSG00000173369|ENST00000509305|C1QB', 'nc|ENSG00000173369|P02746|C1QB'] 38469 6711 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 34.585 2 -0.21851606090920467 0.055575260888233426 0.6565156810575175 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 86871 16708 QLREAFEQL True PC9_epitope_Rep3 1132.5876725457597 1132.58656993586 69.401 2 -0.21853311966066669 0.055575260888233426 0.6565476738662133 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ZWINT|p.A199Qfs*76|1|0.22|ENSG00000122952|chr10:56358833-56358833|C/-|frameshift_variant', 'ENSG00000122952|ENST00000373944|ZWINT', 'ZWINT|p.Q139H|1|0.08|ENSG00000122952|chr10:56359693-56359693|C/A|missense_variant'] 67626 21358 LSVPGLVSV True PC9_epitope_Rep3 869.52221875489 869.52167496793 87.451 1 -0.21853610160004597 0.055575260888233426 0.656553265654895 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 124829 15495 VHIGQVIM True PC9_epitope_Rep1 895.4949584612299 895.49386993586 64.423 2 -0.21855707027377394 0.055575260888233426 0.6565925807507106 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000491035.5_1_X:153628724-153629192:+|nuORF', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000431607.1_1_9:119942983-119943337:-|nuORF'] 47050 15606 ITSATQTSSL True PC9_epitope_Rep2 1007.51350454599 1007.51240993586 65.307 2 -0.2186301457094757 0.055575260888233426 0.6567295144009407 ['nc|ENSG00000236301|Q2M3A8|MRGPRG-AS1'] 116186 11674 TSVPPGSAL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 49.782 2 -0.2186515626930072 0.055575260888233426 0.6567696238065291 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.G1446W|1|0.48|ENSG00000181555|chr3:47120300-47120300|C/A|missense_variant'] 105157 13304 SRFPEALRL True PC9_epitope_Rep6 1087.61382772395 1087.6127299358602 62.829 2 -0.21870034126955826 0.055575260888233426 0.6568609364020225 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 1798 3868 AEHKHFQTMLK True H1975_Epitope_Rep3 1368.6972400780799 1368.6955949037902 19.995 3 -0.21876018980145365 0.0555908157550868 0.6569728973682484 ['ENST00000482518.6_1_2:229715274-230109633:-|nuORF'] 31421 11515 GEAEAFAIGA True NCI_RA007_Epitope_Rep3 934.4396113297398 934.43850993586 52.411 2 -0.21876228280023918 0.0555908157550868 0.6569768113393586 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 101496 22702 SLLDNMIGV True PC9_epitope_Rep2 960.4950180308799 960.49392993586 92.819 2 -0.2187738648130348 0.0555908157550868 0.6569984682429542 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF'] 42804 19551 IEPCFVFII True PC9_epitope_Rep3 1079.5725400755898 1079.57144993586 80.437 2 -0.21883699603333165 0.055607406854326885 0.6571164617437769 ['SLC9A3|p.G288C|1|0.26|ENSG00000066230|chr5:484590-484590|C/A|missense_variant'] 112967 16425 TLLQEAQV True PC9_epitope_Rep4 900.4916469025999 900.49054993586 71.14 2 -0.21886443295644548 0.055607406854326885 0.6571677134982954 ['nc|ENSG00000087460|P84996|GNAS'] 128167 13519 VPLRFPAGSAA True PC9_epitope_Rep2 1084.6029286870798 1084.60182993586 57.29 2 -0.21887113975654235 0.055623996714824354 0.6571802390825316 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 122860 13151 VGGYYPGIIL True NCI_RA007_Epitope_Rep3 1050.5749826037397 1050.57388993586 59.004 2 -0.21892206877956016 0.055623996714824354 0.6572753203290465 ['ENSG00000184497|ENST00000375353|TMEM255B'] 13073 12342 DLPRNAQVAL True PC9_epitope_Rep5 1095.6036569630699 1095.60254993586 52.467 2 -0.21894339843090624 0.05564162389174055 0.6573151238321461 ['ENSG00000078142|ENST00000262039|PIK3C3'] 21823 17403 ESAFEFLSSA True H1975_Epitope_Rep1 1086.48695544498 1086.48637496793 72.415 1 -0.21900622440837803 0.05567791548454532 0.6574323037505483 ['nc|ENSG00000014641|P40925-2|MDH1', 'ENSG00000014641|ENST00000233114|MDH1', 'nc|ENSG00000014641|P40925-3|MDH1'] 7740 5145 ASPPEQPP True NCI_RA007_Epitope_Rep5 821.3919328613299 821.39082993586 26.486 2 -0.21906453741826493 0.055710046471697056 0.6575409857128348 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A'] 4979 6814 ALGTESPR True PC9_epitope_Rep1 829.4293809992099 829.42828993586 31.015 2 -0.21907988637958292 0.055710046471697056 0.657569579732866 ['ENSG00000167194|ENST00000681219|C16orf92', 'nc|ENSG00000167194|Q96LL3|FIMP'] 63307 11665 LLSTTTVP True PC9_epitope_Rep1 830.4749342093 830.47382993586 49.746 2 -0.21908396552389978 0.055710046471697056 0.6575771779842159 ['ENSG00000255307|ENST00000530810|OR52B2'] 103295 18032 SPLPGLASV True PC9_epitope_Rep6 839.47526856247 839.47416993586 81.989 2 -0.21912103454376336 0.055710046471697056 0.6576462093260685 ['nc|ENSG00000075426|P15408-3|FOSL2', 'nc|ENSG00000075426|P15408-2|FOSL2', 'ENSG00000075426|ENST00000264716|FOSL2'] 5675 14286 APAGGFQNIA True PC9_epitope_Rep1 944.4715801643599 944.47048993586 59.776 2 -0.21912775157298908 0.055710046471697056 0.6576587146818833 ['ENSG00000037897|ENST00000324871|METTL1'] 14650 19122 DVEDWKLTLIT True H1975_Epitope_Rep1 1331.6972825643898 1331.69618993586 79.695 2 -0.219153859017852 0.055722470002052736 0.6577073101674563 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 4179 9926 AHVQNGIAL True PC9_epitope_Rep3 921.5032146458099 921.50210993586 43.137 2 -0.21916603305172225 0.055722470002052736 0.6577299651790797 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 12791 16313 DLEYFECSNVP True H1975_Epitope_Rep2 1314.5438186980998 1314.54272993586 67.965 2 -0.21917770205283366 0.055722470002052736 0.6577516771913219 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 31828 6876 GEIRGFETA True NCI_RA007_Epitope_Rep3 978.4770594676199 978.47596993586 34.154 2 -0.21918044003249917 0.055722470002052736 0.6577567711839062 ['ENSG00000109586|ENST00000265000|GALNT7'] 55735 15542 LALPRALQ True PC9_epitope_Rep2 880.5494365622399 880.54832993586 65.054 2 -0.2192007118219367 0.055722470002052736 0.6577944813981753 ['ENST00000597244.1_1_19:16688850-16689066:-|nuORF'] 55522 13837 LAGPAELL True H1975_Epitope_Rep3 782.4538048418999 782.4532549679301 58.532 1 -0.2192339308087594 0.055722470002052736 0.6578562561588013 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 17440 6789 EHDTTEYKL True PC9_epitope_Rep3 1134.51931820242 1134.51822993586 31.134 2 -0.21929434115117621 0.0557338508041945 0.6579685321808983 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'PTPN6|p.R393C|1|0.1|ENSG00000111679|chr12:6957756-6957756|C/T|missense_variant'] 17505 5137 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 27.469 3 -0.21930984278854918 0.0557338508041945 0.6579973294564607 ['ENSG00000162378|ENST00000294353|ZYG11B'] 36931 13272 GVLSDLTK True H1975_Epitope_Rep1 831.47018318203 831.46908993586 56.151 2 -0.21933286093734916 0.0557338508041945 0.658040080013092 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 90753 3852 RERRDNYVP True NCI_RA007_Epitope_Rep2 1203.6108676018298 1203.60922490379 19.618 3 -0.21935408750789537 0.0557338508041945 0.6580794924721187 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 38207 5311 HEAEKFRP True H1975_Epitope_Rep3 1012.5090283022399 1012.50792993586 25.504 2 -0.21938661985165872 0.0557338508041945 0.6581398770530371 ['ENSG00000155875|ENST00000380534|SAXO1'] 64404 22434 LPLVDEAL True PC9_epitope_Rep1 868.4905842734399 868.48948993586 91.114 2 -0.21939620245409827 0.0557338508041945 0.6581576591159101 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant'] 16289 13494 EEFPSFGA True H1975_Epitope_Rep3 882.3759484440199 882.37484993586 57.182 2 -0.21940679933779533 0.0557338508041945 0.6581773209105947 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 2830 7391 AEVDAAMAA True NCI_RA007_Epitope_Rep4 847.3745685450299 847.37346993586 35.072 2 -0.2194559632596253 0.05575146935348447 0.6582685078265669 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 49840 8453 KIAELQTEFQK True NCI_RA007_Epitope_Rep2 1333.7241660185698 1333.7230699358602 37.522 2 -0.21952651380316543 0.055785663644165824 0.6583992657024563 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'nc|ENSG00000196275|Q86UP8-6|GTF2IRD2'] 108347 14257 SYLDRVRSL True PC9_epitope_Rep2 1107.60365696307 1107.60254993586 60.106 2 -0.21952942931886066 0.055785663644165824 0.6584046668665645 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000506277.1_1_5:36885388-36885895:+|nuORF', 'ENST00000402024.2_1_6:116779363-116779789:-|nuORF', 'ENST00000411618.1_1_9:30800375-30800732:-|nuORF', 'ENST00000510337.1_1_5:122971848-122972142:+|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 45970 10536 ISERQAEVL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 51.319 2 -0.21955430295073847 0.055785663644165824 0.6584507388852497 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 79660 10037 PDRAYDAV True PC9_epitope_Rep4 905.4242956187699 905.42318993586 46.271 2 -0.2196115716134237 0.05579911572113501 0.6585567610035331 ['ENSG00000128266|ENST00000615612|GNAZ', 'GNAZ|p.E146Gfs*12|1|0.12|ENSG00000128266|chr22:23096132-23096132|A/-|frameshift_variant'] 106437 6041 STIPPELVKQK True NCI_RA007_Epitope_Rep4 1238.72343774258 1238.7217949037902 29.853 3 -0.21961967257524162 0.05579911572113501 0.6585717523977943 ['ENSG00000058729|ENST00000283109|RIOK2'] 32510 9440 GGETLDQVKMR True H1975_Epitope_Rep3 1232.6183210510399 1232.61722993586 41.312 2 -0.21963866709076443 0.05579911572113501 0.6586068972353862 ['ENSG00000078237|ENST00000179259|TIGAR'] 40188 15961 HQEVLYSL True PC9_epitope_Rep3 987.5025459394699 987.50144993586 66.54 2 -0.2196542959551783 0.05579911572113501 0.6586358085993339 ['ENSG00000129933|ENST00000262815|MAU2', 'ENST00000262816.11_1_19:19456115-19463084:+|nuORF'] 40948 17795 HSYLDSPLV True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 81.082 2 -0.21966191321550813 0.05579911572113501 0.6586498975314082 ['LARP4B|p.P373S|1|0.34|ENSG00000107929|chr10:829393-829393|G/A|missense_variant'] 29871 11125 FVTLRVFCVF True NCI_RA007_Epitope_Rep2 1229.6630864154897 1229.6619899358602 47.854 2 -0.21968438448845923 0.05581673009476905 0.6586914528729464 ['KCND3|p.R293C|1|0.4|ENSG00000171385|chr1:111981850-111981850|G/A|missense_variant'] 131372 15475 VTGYFTVTL True PC9_epitope_Rep5 999.5276980581499 999.52660993586 64.535 2 -0.21968970391621037 0.05585299878742655 0.6587012882295791 ['ENSG00000170848|ENST00000187910|PSG6', 'nc|ENSG00000170848|Q00889|PSG6', 'ENST00000402456.4_1_19:43414555-43422019:-|nuORF'] 42807 21620 IEPGFVFII True H1975_Epitope_Rep1 1033.5848190114498 1033.5837299358602 89.851 2 -0.21992107621107101 0.05595970900951315 0.6591284638529367 ['nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3'] 45966 12697 ISERQAEVL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 53.711 2 -0.22000916447217062 0.05595970900951315 0.6592907801682119 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 62337 12055 LLGGIVAA True NCI_RA007_Epitope_Rep5 712.44832553864 712.4477749679301 53.028 1 -0.22001157685570275 0.05595970900951315 0.6592952228926139 ['ENSG00000119227|ENST00000412723|PIGZ', 'PIGZ|p.L357Pfs*26|1|0.32|ENSG00000119227|chr3:196947820-196947827|GGCACCCA/-|frameshift_variant'] 6037 22036 APLDAYFQV True PC9_epitope_Rep1 1022.50729696674 1022.5061899358601 89.576 2 -0.2200392172928434 0.05595970900951315 0.6593461170416803 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.H309Ifs*39|1|0.07|ENSG00000168411|chr16:74644604-74644604|C/-|frameshift_variant'] 54392 16096 KYFEKQFEL True PC9_epitope_Rep5 1230.6284747285797 1230.62736993586 66.901 2 -0.220065343603844 0.05595970900951315 0.6593942073747521 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 137286 3746 YCRWIYNFNIK True NCI_RA007_Epitope_Rep2 1518.7441902704998 1518.74254490379 19.212 3 -0.22012738530351939 0.055975229888273366 0.65950834489967 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 80067 16520 PFKSPSIGF True PC9_epitope_Rep2 978.5174677276199 978.51636993586 68.785 2 -0.2202333855754681 0.055975229888273366 0.6597031516140661 ['ENST00000486283.1_1_7:129497270-129520783:-|nuORF', 'ENSG00000186591|ENST00000355621|UBE2H'] 79124 5303 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 27.108 2 -0.22027358715360054 0.055975229888273366 0.659776967582163 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 79084 19822 PALLQSVV True PC9_epitope_Rep3 825.49600400705 825.49490993586 81.478 2 -0.2203494514745702 0.05601044483819827 0.6599161663470162 ['ENST00000452079.5_2_1:3659748-3662767:-|nuORF', 'ENST00000418088.5_2_1:3659748-3662908:-|nuORF'] 55526 20081 LAGPAELL True PC9_epitope_Rep2 782.4538048418999 782.4532549679301 82.649 1 -0.2203629884647277 0.05601044483819827 0.6599409909061689 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 19543 12152 ELPSSQNVSPA True NCI_RA007_Epitope_Rep2 1127.54586730343 1127.5447699358601 51.862 2 -0.22049868804458694 0.05608295876307887 0.6601896131762347 ['ENSG00000164309|ENST00000446378|CMYA5'] 103969 10039 SQANVVVKI True PC9_epitope_Rep4 956.5654805492 956.56438993586 46.279 2 -0.22050289745146212 0.05608295876307887 0.6601973188258083 ['ENSG00000100219|ENST00000344347|XBP1'] 28674 17595 FSPDGQYLVTG True PC9_epitope_Rep4 1182.55570371114 1182.55460993586 75.693 2 -0.22055062579826493 0.05610056324368682 0.6602846614456513 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1'] 76371 7865 NQADKAINTAV True PC9_epitope_Rep3 1143.5884008217502 1143.58730993586 35.238 2 -0.22058919525512188 0.056118167067643936 0.6603552059439035 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 117559 15617 TVSIPVWRRS True PC9_epitope_Rep1 1199.67749060967 1199.67638993586 64.89 2 -0.22069649789324627 0.056172022155498776 0.6605512893731821 ['ENST00000589203.5_2_18:14077183-14077513:-|nuORF'] 59282 7637 LFGGLCFRFRD True H1975_Epitope_Rep1 1329.6652116738098 1329.66410993586 34.361 2 -0.2207147866568965 0.056172022155498776 0.660584684240206 ['nc|ENSG00000102226|P51784|USP11'] 124267 15024 VGTLGAWLS True H1975_Epitope_Rep1 902.48616759934 902.48561496793 63.038 1 -0.22082400559198107 0.056184384731571786 0.6607839593605044 ['ENST00000580170.5_1_18:7567593-7774159:+|nuORF'] 17484 5367 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 26.032 3 -0.22088251401407302 0.056184384731571786 0.6608906007658594 ['ENSG00000162378|ENST00000294353|ZYG11B'] 17194 12078 EGSTQPLLS True PC9_epitope_Rep4 930.46582607758 930.4652749679301 54.263 1 -0.2209028499166406 0.056184384731571786 0.6609276483987916 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 95592 9766 RWWFRRLFLIF True NCI_RA007_Epitope_Rep2 1638.9299573245796 1638.9288699358601 42.608 2 -0.22093845994833594 0.056184384731571786 0.6609924998996766 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 116657 8037 TVATILGCQPK True H1975_Epitope_Rep1 1129.6165301458898 1129.6154299358602 35.858 2 -0.22097374093943792 0.056184384731571786 0.6610567241728772 ['ENSG00000181786|ENST00000324436|ACTL9'] 117686 15848 TVTTLVQAP True PC9_epitope_Rep2 928.5229470308799 928.52184993586 66.219 2 -0.22097400084531005 0.056184384731571786 0.6610571971930103 ['ENST00000438404.5_2_21:40816571-40817638:-|nuORF'] 66850 12012 LSNALLETP True H1975_Epitope_Rep3 956.5178616504401 956.51676993586 51.364 2 -0.22100717167149525 0.056215389778681034 0.6611175545996635 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-2|TANGO2', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'ENST00000462579.5_1_22:20030937-20049207:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-5|TANGO2'] 124811 8344 VHGPPTVSV True PC9_epitope_Rep4 891.48141657207 891.48030993586 39.553 2 -0.22101873633746524 0.056215389778681034 0.6611385917995602 ['ENSG00000142798|ENST00000374695|HSPG2'] 111024 8295 THDDSHLVSL True PC9_epitope_Rep6 1122.5305515924601 1122.5294499358602 41.523 2 -0.2210481058044352 0.056215389778681034 0.6611920041403404 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 81015 15281 PILNQVSSL True PC9_epitope_Rep4 969.54949613189 969.54838993586 66.707 2 -0.22105700199008022 0.056215389778681034 0.6612081792490314 ['chr1:221918712-221976287|258|18.01|0.18|6.65|-|0|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|2'] 29857 11648 FVTEGSHFVEA True PC9_epitope_Rep6 1221.56660274801 1221.56550993586 55.929 2 -0.22108629596095217 0.056215389778681034 0.6612614292525892 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 27088 19031 FLGSFLYEY True H1975_Epitope_Rep3 1137.5382627418498 1137.53767496793 79.801 1 -0.22124624255306677 0.056215389778681034 0.6615518389225816 ['CON__P02769'] 104146 5991 SQESFTEGL True PC9_epitope_Rep5 996.4400052525599 996.43890993586 28.039 2 -0.22130514216748687 0.05623193810012119 0.6616586371235014 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.A1711Lfs*3|1|0.11|ENSG00000042781|chr1:216084735-216084735|G/-|frameshift_variant', 'USH2A|p.L537F|1|0.09|ENSG00000042781|chr1:216321918-216321918|G/A|missense_variant'] 12685 7999 DLDSPLQEDP True H1975_Epitope_Rep3 1127.49824840467 1127.49714993586 35.738 2 -0.22134154585362686 0.05623193810012119 0.661724606479751 ['nc|nan|Q8ND61-2|C3orf20', 'ENSG00000131379|ENST00000253697|C3orf20'] 46209 10489 ISNEFKVEV True PC9_epitope_Rep2 1063.5549754351498 1063.5538699358601 45.668 2 -0.22136791113360335 0.05624848518746388 0.6617723661782317 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 4904 23078 ALFGALFLA True PC9_epitope_Rep4 921.5323895157699 921.53128993586 96.992 2 -0.22137924814189505 0.05624848518746388 0.6617928979733164 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 112350 9760 TLAFNLGCDP True H1975_Epitope_Rep3 1049.4851816231699 1049.48408993586 42.565 2 -0.22143560835242895 0.056284723516909656 0.6618949261658746 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-2|PEX6'] 112565 10948 TLEIPEVL True PC9_epitope_Rep1 912.5167990212799 912.51570993586 47.001 2 -0.22150266156690215 0.05630231734372378 0.6620162196357218 ['nc|ENSG00000224287|P0C860|MSL3B'] 67506 9519 LSTELYYCK True NCI_RA007_Epitope_Rep1 1118.5317974624202 1118.5307099358602 41.022 2 -0.22160455859185688 0.05631991051454139 0.6622003510240182 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462'] 7176 7355 AQYEEIAQR True PC9_epitope_Rep3 1106.5356369728997 1106.53452993586 33.3 2 -0.2216386368423232 0.056337503029399154 0.6622618800668896 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6A|p.K338N|1|0.3|ENSG00000205420|chr12:52490632-52490632|C/A|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 12371 16785 DISDVFEMP True PC9_epitope_Rep3 1051.45321278855 1051.45210993586 69.711 2 -0.22166786178564377 0.05635299381105063 0.6623146258002998 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 89245 17609 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48506993586 75.749 2 -0.2216810410825437 0.05635299381105063 0.6623384058383879 ['ENSG00000167658|ENST00000309311|EEF2'] 19116 11390 ELGLPPPPP True H1975_Epitope_Rep2 915.50656869075 915.50546993586 48.861 2 -0.22170519554228185 0.05635299381105063 0.6623819788754739 ['ENSG00000108798|ENST00000225941|ABI3', 'nc|ENSG00000108798|Q9P2A4-2|ABI3'] 29422 18432 FVDSVRRQFEF True PC9_epitope_Rep2 1428.7149983171996 1428.71335490379 76.23 3 -0.2217426470404751 0.05637058439742753 0.6624495132696238 ['ENSG00000158246|ENST00000289166|TENT5B'] 100638 12112 SLDFFHSDRK True H1975_Epitope_Rep1 1250.60438523906 1250.6032899358602 51.602 2 -0.22176951679903087 0.05638712323149477 0.6624979469658762 ['ENST00000590311.5_1_17:67108322-67108499:-|nuORF'] 97409 10736 SEDYENLPTS True H1975_Epitope_Rep3 1153.47751296009 1153.4764099358601 46.374 2 -0.22177450694693546 0.05638712323149477 0.6625069401210325 ['ENSG00000147454|ENST00000519973|SLC25A37', 'ENST00000519192.1_1_8:23386515-23389239:+|nuORF', 'nc|ENSG00000147454|Q9NYZ2-2|SLC25A37'] 5891 7576 APGIPRKD True PC9_epitope_Rep3 852.4817509252399 852.48064993586 34.141 2 -0.22180256026400647 0.056402609506057785 0.662557487023122 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 65167 17930 LQPPPPTWA True PC9_epitope_Rep5 1005.52836676449 1005.52726993586 73.984 2 -0.22186993338500777 0.056402609506057785 0.6626788096621152 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 133846 10575 VYGKVDSF True PC9_epitope_Rep5 913.4545331178899 913.45342993586 45.665 2 -0.22188460236924185 0.056402609506057785 0.6627052116018208 ['ENSG00000152127|ENST00000281923|MGAT5'] 2217 8586 AEMPADSGYPA True H1975_Epitope_Rep3 1107.45427541771 1107.45377496793 38.017 1 -0.22191395144588222 0.05642019720042497 0.6627580211592243 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 31831 9120 GEIRTITVV True NCI_RA007_Epitope_Rep5 986.5760452328999 986.57494993586 41.731 2 -0.22217287910679112 0.056512338775814505 0.6632230990639549 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 119570 7120 VATFSSPEQK True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 32.357 2 -0.22217762730574053 0.0565464541981176 0.6632316137897288 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 41692 17566 IAHEIYQKILS True PC9_epitope_Rep5 1313.7343367794501 1313.73268490379 72.575 3 -0.22222225507466106 0.0565464541981176 0.6633116183681423 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 21141 4574 ERAPPQTHL True PC9_epitope_Rep5 1047.5461420869499 1047.54504993586 22.657 2 -0.22222414548572345 0.0565464541981176 0.6633150063529514 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 78061 19425 NVVDVFHAV True PC9_epitope_Rep3 998.51853035678 998.51742993586 79.944 2 -0.2222390585238545 0.056561929255656195 0.6633417306552442 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 103697 6497 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48159496793 30.016 1 -0.22224016643331604 0.056561929255656195 0.6633437158433003 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 26553 8482 FIIPQNMNP True NCI_RA007_Epitope_Rep3 1072.5375515492 1072.5364499358602 40.44 2 -0.22227660979401404 0.056561929255656195 0.6634090011327204 ['ZNF782|p.F353Lfs*9|1|0.24|ENSG00000196597|chr9:96818964-96818964|G/-|frameshift_variant', 'ENSG00000196597|ENST00000481138|ZNF782'] 59418 13909 LFLVASDG True NCI_RA007_Epitope_Rep5 820.43306939732 820.43252496793 60.182 1 -0.2223209234164259 0.05657845695117406 0.6634883458629612 ['PCDHGA3|p.V211F|1|0.18|ENSG00000254245|chr5:141344664-141344664|G/T|missense_variant'] 63241 14027 LLSKRLVD True PC9_epitope_Rep4 942.5862159937799 942.58510993586 61.866 2 -0.2224133692889418 0.05657845695117406 0.6636537332640148 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 120847 10228 VELRLSCRHLL True NCI_RA007_Epitope_Rep5 1337.76017468781 1337.75851490379 45.974 3 -0.22251775695131779 0.056632253736349746 0.6638402583752981 ['nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7'] 142356 5934 YYEHVKARF True PC9_epitope_Rep2 1211.60874234351 1211.60710490379 28.215 3 -0.22260386233665624 0.056632253736349746 0.6639939352699722 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 79413 4871 PATLRLARPAP True NCI_RA007_Epitope_Rep3 1161.6982260542497 1161.6965849037902 26.144 3 -0.2226082783299832 0.056648777579010136 0.6640018123334235 ['ENST00000282928.4_1_3:147127600-147127744:+|nuORF'] 117691 23582 TVTTVILEV True PC9_epitope_Rep3 973.5695628701299 973.56846993586 95.993 2 -0.2226101064160552 0.056648777579010136 0.6640050730710911 ['ENSG00000119203|ENST00000238112|CPSF3'] 126207 9202 VLGDSEEEDMG True H1975_Epitope_Rep1 1179.4601486437898 1179.45904993586 40.302 2 -0.2226290246754448 0.05668287774610096 0.6640388130542243 ['nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L', 'nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L', 'ENSG00000074964|ENST00000361221|ARHGEF10L', 'ENST00000469726.5_1_1:17942561-18023872:+|nuORF', 'nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L'] 128801 13024 VQADNIRSL True PC9_epitope_Rep1 1014.54580773378 1014.5447099358599 54.967 2 -0.2226563072667924 0.05668287774610096 0.6640874566449728 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 108007 18449 SWRRRWQHRYW True PC9_epitope_Rep6 1715.86579392823 1715.86468993586 83.607 2 -0.22265732396479418 0.05668287774610096 0.6640892690540058 ['ENST00000570069.5_1_16:1826945-1827407:+|nuORF', 'ENST00000561903.6_1_16:1826945-1828699:+|nuORF'] 33426 8243 GLAEVAAAV True NCI_RA007_Epitope_Rep4 799.4439684341899 799.44341496793 38.502 1 -0.2226925731660634 0.05671803089306676 0.6641520917318702 ['ENSG00000170684|ENST00000303809|ZNF296'] 121295 5353 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44962496793 25.637 1 -0.22269900751379051 0.05671803089306676 0.6641635563632443 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 13111 21186 DLQQVFQIAY True H1975_Epitope_Rep1 1223.61863832087 1223.61754993586 88.011 2 -0.22279674632526472 0.05673560648406931 0.6643375942272995 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant', 'LAMA2|p.A438Hfs*14|1|0.34|ENSG00000196569|chr6:129177710-129177710|G/-|frameshift_variant'] 118942 13818 VADSSPFAL True NCI_RA007_Epitope_Rep4 905.44944773745 905.4488949679301 60.393 1 -0.2228454189485389 0.05679044549197891 0.6644241845609123 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 64817 20060 LQDAFHISL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 82.567 2 -0.2228785604191366 0.05680801907884931 0.6644831146856943 ['ENST00000571053.1_1_17:54962003-54962030:-|nuORF', 'ENST00000449319.2_1_11:65340387-65341109:+|nuORF', 'nc|ENSG00000176973|Q8N5H3-2|FAM89B', 'nc|ENSG00000176973|Q8N5H3-1|FAM89B', 'ENSG00000176973|ENST00000530349|FAM89B'] 41087 4782 HTQREKIT True PC9_epitope_Rep1 1011.5461420869499 1011.54504993586 23.263 2 -0.2229320543247345 0.0568255920108807 0.664578183462072 ['ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 27398 9593 FLVSAPFLP True NCI_RA007_Epitope_Rep5 989.5586042636098 989.55750993586 43.542 2 -0.22300088873413712 0.05689799720540289 0.6647004229724508 ['ENST00000357508.5_1_1:45190214-45190565:+|nuORF'] 88589 8205 QTDPATLLH True H1975_Epitope_Rep2 994.5083595959 994.50726993586 36.514 2 -0.22301509090546914 0.05689799720540289 0.6647256309710157 ['ENSG00000114744|ENST00000473414|COMMD2', 'ENST00000463077.5_1_3:149459310-149470177:-|nuORF'] 80991 11335 PIILKRKRGRP True H1975_Epitope_Rep3 1332.88300713216 1332.88135490379 48.709 3 -0.22312263228941423 0.05693313709782588 0.6649163672056283 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 43190 20616 IFIDKIYSI True PC9_epitope_Rep2 1110.63249747986 1110.6314099358601 84.734 2 -0.22312577314672513 0.05693313709782588 0.6649219340528854 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 74877 5253 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 25.592 2 -0.22328686220714095 0.0569869036308426 0.665207158862656 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 101969 8405 SLQGEQELP True H1975_Epitope_Rep2 999.4872897981498 999.48618993586 37.283 2 -0.22331606740601834 0.0569869036308426 0.6652588090116243 ['ENST00000435221.6_1_1:2487266-2487602:+|nuORF'] 87408 5059 QPWRGGAGA True PC9_epitope_Rep1 898.4409487424198 898.43984993586 24.316 2 -0.22335846117313754 0.05702203759244425 0.6653337503775261 ['ENSG00000165684|ENST00000684778|SNAPC4'] 92805 16014 RPALPVSYLQA True PC9_epitope_Rep6 1213.68190728377 1213.68080993586 73.919 2 -0.22340911939430136 0.05702203759244425 0.6654232497993954 ['ENSG00000167615|ENST00000326764|LENG8'] 32513 13644 GGETLDQVKMR True PC9_epitope_Rep2 1232.6183210510399 1232.61722993586 57.773 2 -0.22345630162885788 0.057036416131135324 0.6655065577891959 ['ENSG00000078237|ENST00000179259|TIGAR'] 118529 10247 TYQDRLTKL True PC9_epitope_Rep1 1136.61897267404 1136.61733490379 44.297 3 -0.2234983884677768 0.057036416131135324 0.665580828104516 ['ENST00000519879.1_1_8:118533115-118541135:+|nuORF', 'nc|ENSG00000164758|Q96HR3-2|MED30', 'ENSG00000164758|ENST00000297347|MED30'] 87593 14426 QQLRTGEVL True PC9_epitope_Rep1 1042.5771078620598 1042.5760099358602 60.313 2 -0.22363090136834693 0.057036416131135324 0.6658144208266079 ['nc|ENSG00000160097|Q8NAU1-4|FNDC5', 'nc|ENSG00000160097|Q8NAU1-3|FNDC5', 'nc|ENSG00000160097|Q8NAU1-2|FNDC5', 'ENSG00000160097|ENST00000373471|FNDC5'] 44473 18803 ILLANFLAQTE True H1975_Epitope_Rep1 1231.68123857743 1231.68014993586 78.405 2 -0.22364416803165488 0.057036416131135324 0.6658377861693048 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000586392.1_1_19:34884680-34890938:+|nuORF', 'CON__Q3ZBD7'] 13290 8595 DLTGGSFQIIA True H1975_Epitope_Rep2 1120.57643915572 1120.57534993586 38.015 2 -0.223663068800233 0.05705398055358939 0.6658710677318846 ['chr8:123194148-123202384|366|13.69|0.72|4.25|+|2|TE_info:L2b,L2b_dup46378,L2,LINE,acceptor,+,123202384,123202636|FAM83A,None|1'] 96748 20312 SAMEVVPAL True PC9_epitope_Rep2 915.4735543103099 915.47244993586 83.553 2 -0.22370256368040084 0.05707048129935926 0.6659405875379107 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 22491 9872 ETFRRWHRKRR True NCI_RA007_Epitope_Rep5 1626.9079930933797 1626.9063449037899 44.619 3 -0.2237112893983986 0.05707048129935926 0.6659559421797413 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 102978 21863 SPFFPLVSA True PC9_epitope_Rep4 963.5065686907499 963.5060249679301 92.304 1 -0.22376260101928694 0.05708591756532752 0.6660462017707546 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 107018 9580 SVFHHWHSYME True H1975_Epitope_Rep2 1458.6139043769401 1458.61225490379 41.825 3 -0.22379501539590507 0.05708591756532752 0.6661031907579087 ['ENSG00000161040|ENST00000440067|FBXL13', 'nc|ENSG00000161040|Q8NEE6-3|FBXL13', 'nc|ENSG00000161040|Q8NEE6-2|FBXL13', 'nc|ENSG00000161040|Q8NEE6|FBXL13', 'nc|ENSG00000161040|Q8NEE6-4|FBXL13'] 18312 20704 EISEEDDAV True PC9_epitope_Rep5 1005.4138500743699 1005.41274993586 84.695 2 -0.22381216808876864 0.05708591756532752 0.6661333383594215 ['ENSG00000162994|ENST00000401408|CLHC1', 'ENST00000494539.5_1_2:55402928-55459402:-|nuORF', 'nc|ENSG00000162994|Q8NHS4-2|CLHC1'] 35914 8572 GTQWLWKP True NCI_RA007_Epitope_Rep2 1014.5287011176598 1014.52760993586 37.988 2 -0.22387256328174363 0.05710347910303211 0.6662394382868911 ['ENST00000424845.5_1_12:53564215-53567250:-|nuORF'] 82602 6956 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.4074249679301 31.676 1 -0.22390037998064113 0.05711784862932062 0.6662882790011151 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 35457 4774 GSHSMRYFS True NCI_RA007_Epitope_Rep5 1070.4603638576598 1070.4592699358602 25.047 2 -0.22390069728096915 0.05711784862932062 0.666288836022133 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G'] 64284 19465 LPISVAASI True PC9_epitope_Rep1 869.52221875489 869.52167496793 79.689 1 -0.22390410985074913 0.05711784862932062 0.666294826653726 ['ENSG00000178401|ENST00000549441|DNAJC22'] 141076 10069 YSPAQSQATIY True H1975_Epitope_Rep3 1227.57716743171 1227.57606993586 43.77 2 -0.22392182195928587 0.05711784862932062 0.6663259155111877 ['ENSG00000181555|ENST00000409792|SETD2'] 25826 6359 FFERRYQERMK True NCI_RA007_Epitope_Rep5 1588.7932657212398 1588.79216993586 31.135 2 -0.22402215028668848 0.0571705245907745 0.6665018868784043 ['nc|ENSG00000188732|A4D161-3|FAM221A', 'nc|ENSG00000188732|A4D161-2|FAM221A', 'ENSG00000188732|ENST00000344962|FAM221A'] 97657 11150 SEGLAQLTS True PC9_epitope_Rep5 904.45017601344 904.44962496793 47.873 1 -0.22404593487826235 0.0571705245907745 0.6665435720715838 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 109050 19320 TAISLFYEL True NCI_RA007_Epitope_Rep4 1055.5539128059902 1055.55280993586 83.554 2 -0.22407113371983337 0.0571705245907745 0.666587722566552 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 62891 10313 LLNKSGPV True PC9_epitope_Rep1 826.4912529797799 826.49014993586 44.553 2 -0.22414916190202921 0.057206703910614526 0.6667243475836768 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 6223 18390 APPLTSLQL True PC9_epitope_Rep6 938.54368247546 938.5431349679301 83.382 1 -0.22418569819647668 0.05722426025586116 0.6667882763996505 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 30081 18267 FYISPVNKL True PC9_epitope_Rep5 1079.60153170475 1079.6004299358601 75.278 2 -0.2242191048010159 0.057258304781766724 0.6668467039087987 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 33050 20810 GILGNGLVI True PC9_epitope_Rep4 854.5225531080599 854.52144993586 88.196 2 -0.2242334078194575 0.057258304781766724 0.6668717122625197 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 92221 20480 RLINQVLEL True PC9_epitope_Rep5 1096.6604435632 1096.65934993586 83.815 2 -0.22425947168269666 0.057258304781766724 0.6669172727349306 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC'] 25377 9946 FEAPATINSA True H1975_Epitope_Rep2 1019.49237517859 1019.49187496793 43.246 1 -0.2243407462765259 0.05732958459791088 0.6670592494699905 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 64457 5785 LPPQRCWARRW True NCI_RA007_Epitope_Rep4 1467.7669914037497 1467.76534490379 28.874 3 -0.22434939768953394 0.05732958459791088 0.6670743540599363 ['ENST00000569796.1_1_16:2278495-2279691:+|nuORF', 'ENST00000565413.1_3_16:2273792-2282300:+|nuORF'] 55430 19251 LAFEGPILL True H1975_Epitope_Rep1 971.5691689473098 971.5686249679301 80.212 1 -0.22440345573747164 0.05732958459791088 0.6671686981296551 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.I1609Mfs*13|1|0.25|ENSG00000188994|chr6:87258456-87258457|AA/-|frameshift_variant', 'ZNF292|p.L1719Ffs*6|1|0.39|ENSG00000188994|chr6:87258778-87258779|-/C|frameshift_variant', 'ZNF292|p.L434Tfs*10|1|0.31|ENSG00000188994|chr6:87254927-87254928|-/A|frameshift_variant', 'ZNF292|p.H563Afs*10|1|0.12|ENSG00000188994|chr6:87255315-87255316|-/GCCCATT|frameshift_variant'] 37054 16676 GVPIRLEVGP True PC9_epitope_Rep5 1035.6076797143498 1035.60658993586 69.147 2 -0.22443748226383026 0.05734606862909382 0.6672280502710983 ['ENSG00000136628|ENST00000366923|EPRS1'] 67865 16824 LTAPELIL True H1975_Epitope_Rep2 868.52696978216 868.5264249679301 69.96 1 -0.22444519642049274 0.05734606862909382 0.6672415025438061 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 140670 12165 YRTTVYHPF True PC9_epitope_Rep1 1182.5821932425 1182.58054490379 51.656 3 -0.22448319029275624 0.05736361943772109 0.6673077392326032 ['ENST00000535589.3_1_2:114648352-114674470:+|nuORF', 'ENST00000263238.6_1_2:114647705-114674470:+|nuORF', 'ENST00000415792.5_1_2:114647705-114688890:+|nuORF', 'ENST00000446821.5_1_2:114647705-114684940:+|nuORF'] 53072 2616 KPPPPPPPP True PC9_epitope_Rep2 922.5276384884999 922.52654993586 14.719 2 -0.22452301417331957 0.05737689658382202 0.6673771330350305 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 4957 9441 ALGKEEIAL True NCI_RA007_Epitope_Rep5 942.5385970950198 942.53750993586 42.952 2 -0.2245253541696713 0.05737689658382202 0.6673812094616127 ['KHNYN|p.H451Qfs*27|1|0.27|ENSG00000100441|chr14:24432725-24432725|T/-|frameshift_variant', 'ENSG00000100441|ENST00000553935|KHNYN'] 29297 21585 FVCNWMYCGKR True PC9_epitope_Rep3 1405.6093536738097 1405.6082499358602 88.322 2 -0.2245323830058667 0.05737689658382202 0.6673934534479353 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 12957 6781 DLLEYHRRQR True NCI_RA007_Epitope_Rep5 1384.73237971684 1384.73074490379 32.769 3 -0.22456027882428795 0.05737689658382202 0.6674420365472951 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 139835 7435 YPNSGSVSA True PC9_epitope_Rep1 880.39266113732 880.3921149679301 33.414 1 -0.2245610349091883 0.05737689658382202 0.667443353105697 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 89567 12928 QYMKIISSF True NCI_RA007_Epitope_Rep5 1115.5685173243098 1115.56740993586 56.409 2 -0.2246621072721081 0.057394444858142823 0.6676192386005382 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 41170 4544 HVGKTPIVGQP True H1975_Epitope_Rep3 1131.6400424717897 1131.63838490379 22.598 3 -0.22473896946472557 0.057410923712721995 0.6677528474469272 ['CON__P12763'] 70240 14706 LVQYRWPR True PC9_epitope_Rep1 1116.6192474575598 1116.6181499358602 61.386 2 -0.22474252256935967 0.057410923712721995 0.6677590207236156 ['ENSG00000102595|ENST00000376747|UGGT2'] 99812 9153 SIKQSPLSV True PC9_epitope_Rep3 957.5494961318899 957.54838993586 40.148 2 -0.2248229292206847 0.05742633234675453 0.6678986497288184 ['ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-6|NSD2', 'ENST00000508355.5_1_4:1902372-1920392:+|nuORF', 'nc|ENSG00000109685|O96028-5|NSD2', 'nc|ENSG00000109685|O96028-3|NSD2', 'WHSC1-GSDMB|4|fusion', 'WHSC1-GSDMB|3|fusion', 'WHSC1-GSDMB|1|fusion', 'WHSC1-GSDMB|2|fusion', 'nc|ENSG00000109685|O96028-7|NSD2'] 55521 14061 LAGPAELL True H1975_Epitope_Rep2 782.4538048418999 782.4532549679301 59.24 1 -0.22484792162664222 0.05742633234675453 0.6679420218282376 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 114272 11359 TPPGPLASA True PC9_epitope_Rep1 809.42831837005 809.4272299358599 48.573 2 -0.2248967779374554 0.05742633234675453 0.6680267691571861 ['ENSG00000124875|ENST00000226317|CXCL6'] 127342 18118 VMPEAVPEV True PC9_epitope_Rep5 969.4841189940098 969.48302993586 74.701 2 -0.22491277325595563 0.05743960093809329 0.6680545039693703 ['ENSG00000101191|ENST00000395343|DIDO1', 'nc|ENSG00000101191|Q9BTC0-1|DIDO1'] 116293 10301 TTDNANIL True PC9_epitope_Rep6 860.4239612656 860.42286993586 50.312 2 -0.2249197749329507 0.05743960093809329 0.6680666426941548 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 128651 11869 VPVHDIYVSQ True PC9_epitope_Rep1 1155.59242357303 1155.5913299358601 50.519 2 -0.22498647851412776 0.05743960093809329 0.6681822335759677 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 85332 6404 QESPGGLEA True H1975_Epitope_Rep3 886.4032258210199 886.40212993586 29.609 2 -0.22499304047377353 0.05743960093809329 0.6681935997050953 ['ENSG00000121892|ENST00000303538|PDS5A', 'chr4:39825488-39837932|110|16.31|0.92|4.15|-|2|PDS5A,None|1'] 44988 13173 IPATPGIGA True PC9_epitope_Rep2 795.4490538146299 795.44794993586 55.944 2 -0.225010888595245 0.05743960093809329 0.6682245102354318 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 12785 7586 DLETGVHLDP True H1975_Epitope_Rep3 1094.5244035828598 1094.5233099358602 34.16 2 -0.22507120762574348 0.05747575706814079 0.6683289245168 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110501354-110532119:+|nuORF'] 35166 17423 GQWYGPNTV True PC9_epitope_Rep3 1020.4664947839199 1020.46597496793 72.186 1 -0.22513893248655711 0.05752731198004876 0.6684460664458526 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 64226 15619 LPGVAGAVG True PC9_epitope_Rep1 739.42283906679 739.42229496793 64.898 1 -0.22516521137573678 0.05752731198004876 0.6684914941440927 ['ENSG00000164692|ENST00000297268|COL1A2', 'COL1A2|p.R882H|1|0.23|ENSG00000164692|chr7:94424415-94424415|G/A|missense_variant'] 47279 9315 IVDHIHFQY True H1975_Epitope_Rep3 1170.5821932425 1170.58054490379 40.825 3 -0.22521143547612754 0.05752731198004876 0.668571365126775 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8'] 25729 12864 FESPNISVP True H1975_Epitope_Rep3 988.48656152216 988.48546993586 54.704 2 -0.22521271645287683 0.05752731198004876 0.6685735778915315 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 13488 10135 DNIQTVKRLRT True PC9_epitope_Rep5 1342.7680965192199 1342.76644490379 43.969 3 -0.22532838084373152 0.05754271038820858 0.6687732338336093 10076 13564 AYTISATELL True PC9_epitope_Rep2 1080.5702911461199 1080.56918993586 57.465 2 -0.22535440614241414 0.05754271038820858 0.6688181188059882 ['ENSG00000185985|ENST00000335565|SLITRK2', 'SLITRK2|p.P733T|1|0.6|ENSG00000185985|chrX:145824622-145824622|C/A|missense_variant'] 32316 3227 GFEDLERGRRE True NCI_RA007_Epitope_Rep2 1362.6640253734997 1362.66238490379 17.207 3 -0.22535812688791165 0.05754271038820858 0.6688245346827467 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 131761 18547 VTPPSVPGI True PC9_epitope_Rep2 865.49091862661 865.48982993586 76.692 2 -0.22540409639477782 0.057559178204555604 0.6689037781791134 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 4690 11286 ALASHLIEA True PC9_epitope_Rep4 923.5076313199099 923.50652993586 51.19 2 -0.2254319479173668 0.057559178204555604 0.668951767681164 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 73761 5824 NAEYSEKRFRM True NCI_RA007_Epitope_Rep4 1429.67723290949 1429.6761299358602 29.027 2 -0.22545730541546255 0.05757564479511705 0.6689954456169608 ['MRAP2|p.S80Y|1|0.29|ENSG00000135324|chr6:84089102-84089102|C/A|missense_variant'] 97769 10893 SEIVDFSVP True H1975_Epitope_Rep2 991.4862271689899 991.48512993586 46.929 2 -0.22550805718649514 0.05757564479511705 0.6690828240810446 ['ENSG00000105464|ENST00000263269|GRIN2D', 'ENST00000584176.1_1_17:72843434-72846906:-|nuORF', 'ENSG00000161509|ENST00000293190|GRIN2C'] 26096 23345 FGQEELQANL True H1975_Epitope_Rep1 1147.5509526838698 1147.54984993586 97.035 2 -0.22561657842940797 0.05761179031987942 0.669269481103473 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 131791 12447 VTQDGTPITVP True H1975_Epitope_Rep1 1126.58700383942 1126.5859099358602 52.914 2 -0.22564211829797476 0.0576218207527862 0.6693133737446473 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 69733 11815 LVESGWGSLLP True NCI_RA007_Epitope_Rep1 1156.6128246644398 1156.61172993586 49.937 2 -0.22564420824633058 0.0576218207527862 0.6693169649079458 ['ENST00000588984.5_1_19:3751026-3754498:-|nuORF', 'ENSG00000011132|ENST00000316757|APBA3'] 131894 4736 VTRLESLL True NCI_RA007_Epitope_Rep3 929.55458151233 929.55348993586 25.58 2 -0.22571110746132603 0.0576218207527862 0.6694318694641604 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 107715 6020 SVSDGIHSV True PC9_epitope_Rep6 899.4348603024702 899.43376993586 31.495 2 -0.2257378909284501 0.0576218207527862 0.669477845765429 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 127853 20056 VPFPTPLEA True PC9_epitope_Rep4 969.5171333744498 969.51602993586 85.284 2 -0.22575887166757813 0.0576218207527862 0.6695138506229358 ['ENSG00000196976|ENST00000357360|LAGE3'] 116814 13357 TVEFRRTDV True PC9_epitope_Rep2 1121.58292151849 1121.58182993586 56.651 2 -0.22581793792868482 0.0576218207527862 0.6696151640801832 ['ENST00000474430.5_1_1:155151285-155154671:+|nuORF', 'ENST00000468878.1_1_1:155151285-155156663:+|nuORF', 'nc|ENSG00000163462|Q7Z4K8-2|TRIM46', 'nc|ENSG00000163462|Q7Z4K8-5|TRIM46', 'ENSG00000163462|ENST00000334634|TRIM46'] 59591 21498 LFVLLPEQSPV True PC9_epitope_Rep1 1240.70672504928 1240.70562993586 87.537 2 -0.2258444444710596 0.0576218207527862 0.6696606056598884 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 107604 16595 SVPNKDVFQEL True PC9_epitope_Rep4 1274.65066672514 1274.6495699358602 71.808 2 -0.2258537082578355 0.0576218207527862 0.6696764835900488 ['ENSG00000115919|ENST00000264170|KYNU'] 114133 12772 TPHPFPAV True PC9_epitope_Rep5 864.4493881678 864.44828993586 54.136 2 -0.22596193558358585 0.057694096634355985 0.6698618496970008 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 118983 21919 VAEGVLMTSL True PC9_epitope_Rep1 1018.53688284286 1018.53578993586 89.128 2 -0.22603789458834017 0.057694096634355985 0.6699918019318741 ['ENST00000416880.5_1_3:42610473-42623377:-|nuORF'] 100712 12840 SLDRQLTGL True PC9_epitope_Rep4 1001.55055876105 1001.54946993586 57.254 2 -0.22611046275010224 0.057711627906976745 0.6701158404400243 ['ENSG00000168434|ENST00000307149|COG7'] 27139 8345 FLKFKHYHT True NCI_RA007_Epitope_Rep4 1219.65021323267 1219.64857490379 38.914 3 -0.22612601013472175 0.05772808453638934 0.670142400803764 ['ENST00000332290.3_1_6:170104364-170104589:+|nuORF'] 116141 15651 TSTDFLYF True H1975_Epitope_Rep2 992.4491133842799 992.4485649679301 65.359 1 -0.2261925121248606 0.05772808453638934 0.6702559525337489 ['ENST00000391835.1_1_19:50380125-50380224:-|nuORF'] 36853 20000 GVLKGYRVIFW True PC9_epitope_Rep5 1336.7655773380798 1336.76392490379 81.984 3 -0.22625802288789568 0.057745614198277305 0.6703677216447288 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 8385 19774 ATLPAVVTV True PC9_epitope_Rep2 869.52221875489 869.52167496793 81.447 1 -0.2263080135809343 0.05780034974141459 0.6704529515857653 ['ENST00000580601.5_1_17:73689468-73702598:+|nuORF', 'nc|ENSG00000161526|Q9UHR5-2|SAP30BP', 'ENSG00000161526|ENST00000584667|SAP30BP', 'ENST00000579005.1_1_17:73702284-73702598:+|nuORF', 'ENST00000584557.1_1_17:73702349-73702598:+|nuORF', 'ENST00000580322.5_1_17:73702024-73702598:+|nuORF', 'ENST00000293208.13_1_17:73701692-73702598:+|nuORF', 'ENST00000583329.5_1_17:73699767-73702598:+|nuORF', 'ENST00000578756.5_1_17:73699860-73702598:+|nuORF'] 45119 20476 IPLTLLPAA True PC9_epitope_Rep4 907.5742543277498 907.57314993586 86.907 2 -0.22634726636637295 0.05781572632401362 0.6705198378682969 ['ENSG00000116903|ENST00000366645|EXOC8'] 100249 21211 SIYDFYFI True PC9_epitope_Rep3 1066.50114895714 1066.50004993586 86.878 2 -0.22636111728644925 0.05781572632401362 0.6705434320286502 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'ENST00000572640.5_1_16:21008599-21073979:-|nuORF'] 60227 17446 LGQDRYRRRY True PC9_epitope_Rep5 1381.73271407001 1381.7310749037902 72.105 3 -0.2264327902726742 0.05781572632401362 0.6706654587420642 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 67104 5106 LSQIQENYQKP True NCI_RA007_Epitope_Rep5 1346.68302948258 1346.6813849037899 26.337 3 -0.22644996044358673 0.05783110119047619 0.6706946759540139 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant'] 36106 22305 GVAGTDIFLVV True PC9_epitope_Rep4 1089.60701100801 1089.60647496793 94.035 1 -0.22645799225487215 0.05783110119047619 0.6707083409946373 ['ENST00000481918.1_1_1:213186656-213188829:-|nuORF'] 78779 6553 PAAPAVSQA True PC9_epitope_Rep3 810.4235673427801 810.42246993586 30.233 2 -0.2264935936178765 0.05783110119047619 0.6707688957921257 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 73239 13598 MSDTTFKAL True PC9_epitope_Rep5 1012.48993265044 1012.4888299358599 57.329 2 -0.2265230726048507 0.05784862632763527 0.6708190170809565 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF'] 25205 11582 FDDPLLGPR True H1975_Epitope_Rep3 1028.52909504048 1028.5279899358602 49.679 2 -0.22664367076713032 0.057940552806815225 0.6710238752619999 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 15466 7427 EALNRDLVP True NCI_RA007_Epitope_Rep5 1025.5505587610498 1025.54946993586 35.246 2 -0.22668841229320494 0.05797128403511382 0.6710998004834356 ['ENSG00000144840|ENST00000273375|RABL3'] 95854 16075 RYKLYQEMF True PC9_epitope_Rep2 1276.6274291827597 1276.62577490379 67.089 3 -0.22672219079839945 0.05797128403511382 0.6711570943449822 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 64913 4116 LQEEFQLQR True NCI_RA007_Epitope_Rep2 1189.6091362663299 1189.60750490379 20.65 3 -0.22672391149656765 0.05797128403511382 0.6711600122994867 ['ENST00000502850.5_1_4:77053774-77066720:-|nuORF'] 58144 18358 LEKQACEL True PC9_epitope_Rep5 932.4637179025999 932.46262993586 75.631 2 -0.22673002273598064 0.05797128403511382 0.6711703752259245 ['ENSG00000127578|ENST00000319070|WFIKKN1'] 119571 7716 VATFSSPEQK True NCI_RA007_Epitope_Rep1 1092.54513902744 1092.5440499358601 34.006 2 -0.22678521501898932 0.05797128403511382 0.6712639307543983 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 105808 3370 SSIRHMIRK True NCI_RA007_Epitope_Rep2 1126.63933127914 1126.6376849037902 17.769 3 -0.2267868259545047 0.05797128403511382 0.6712666604808613 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28'] 48303 7702 IYQRHVYNL True PC9_epitope_Rep4 1204.6352914445197 1204.6336349037902 37.012 3 -0.2268467274779856 0.05802600011158846 0.6713681254964707 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 32238 8477 GEYKIMVA True NCI_RA007_Epitope_Rep5 909.4629896266099 909.46188993586 39.29 2 -0.2268700684503199 0.058043518690719734 0.6714076419072338 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 107238 14843 SVKDAYSL True PC9_epitope_Rep6 881.44944773745 881.44834993586 69.066 2 -0.22691404495644374 0.058059956854868706 0.6714820639322508 ['CAPN7|p.P559S|1|0.29|ENSG00000131375|chr3:15241475-15241475|C/T|missense_variant'] 11354 3954 DEPEKERLRQR True NCI_RA007_Epitope_Rep2 1454.7589883875 1454.75734490379 20.017 3 -0.22691509753257197 0.058059956854868706 0.671483844733134 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 110181 13763 TEPYEDGCEDY True H1975_Epitope_Rep2 1319.44997788291 1319.44888993586 58.084 2 -0.22703393057293972 0.05809499014393573 0.6716847459689058 ['PAIP1|p.S147P|1|0.15|ENSG00000172239|chr5:43547910-43547910|A/G|missense_variant'] 57693 8686 LEEIAESSP True H1975_Epitope_Rep2 973.46040634397 973.45930993586 38.373 2 -0.22704551616633042 0.05809499014393573 0.6717043172584483 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 36511 19274 GVGPVNISV True PC9_epitope_Rep2 840.4705175352 840.46942993586 79.511 2 -0.22716195687503593 0.05811034457109917 0.6719008651144693 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q5XQN5', 'CON__Q922U2'] 80476 6739 PGLHTCIAT True PC9_epitope_Rep2 911.45348757207 911.45238993586 31.33 2 -0.22716261751575703 0.05811034457109917 0.6719019794601842 ['MUSK|p.Y280H|1|0.26|ENSG00000030304|chr9:110747725-110747725|T/C|missense_variant'] 1607 18297 AEFGDFDIK True PC9_epitope_Rep3 1040.48147614172 1040.4803699358602 75.584 2 -0.2271647794890902 0.05811034457109917 0.6719056261388675 ['nc|ENSG00000156531|Q8IWS0-4|PHF6', 'nc|ENSG00000156531|Q8IWS0-2|PHF6', 'nc|ENSG00000156531|Q8IWS0-5|PHF6', 'nc|ENSG00000156531|Q8IWS0-3|PHF6', 'ENSG00000156531|ENST00000370803|PHF6'] 62673 17070 LLLKREVP True PC9_epitope_Rep1 966.6226015025 966.62150993586 70.485 2 -0.2272130033832293 0.05812785897578936 0.6719869422523633 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENST00000540578.6_1_18:9182415-9235682:+|nuORF'] 118402 14234 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47054993586 60.017 2 -0.22735563310814078 0.05819466393976016 0.6722271690564278 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 26864 10405 FLDEKTHEL True PC9_epitope_Rep5 1130.56078909158 1130.55913490379 45.008 3 -0.22736520639236796 0.05819466393976016 0.672243278159982 ['ENSG00000129317|ENST00000344862|PUS7L'] 62719 21434 LLLPASLTGG True PC9_epitope_Rep1 940.5593325396 940.55822993586 87.285 2 -0.22737444159168568 0.05819466393976016 0.6722588165909483 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550793.1_1_12:58087944-58089649:+|nuORF', 'ENST00000549897.1_1_12:58087944-58088778:+|nuORF', 'ENST00000553208.5_1_12:58087944-58109621:+|nuORF'] 35517 12447 GSQSGSFSF True PC9_epitope_Rep1 902.3770110731799 902.37646496793 52.742 1 -0.22738462360197323 0.05819466393976016 0.6722759460359031 ['ENST00000550078.2_2_1:203764956-203765340:+|nuORF'] 93107 6852 RPNPPPVSV True PC9_epitope_Rep6 961.53451477409 961.53340993586 35.232 2 -0.2274432379914896 0.05819466393976016 0.6723745133414426 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 65185 8327 LQQQRIQQL True NCI_RA007_Epitope_Rep4 1153.6567551650899 1153.65564993586 38.843 2 -0.22744805060878193 0.05819466393976016 0.6723826032383889 ['ENST00000567762.1_1_15:72767286-72810465:+|nuORF'] 108402 14878 SYLKQLPHF True PC9_epitope_Rep4 1131.6076797143498 1131.60604490379 65.166 3 -0.2274493825213459 0.05819466393976016 0.6723848420688379 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 118918 5266 VADPETRTV True PC9_epitope_Rep1 986.50327421546 986.50216993586 25.101 2 -0.2274854788379128 0.05820568114217727 0.6724455031119189 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 57732 12988 LEELWGLSL True PC9_epitope_Rep2 1058.5648118428599 1058.56370993586 55.246 2 -0.22751877588319905 0.05820568114217727 0.6725014363647865 ['ENST00000318407.4_1_2:242512778-242512907:+|nuORF'] 48046 21257 IYLPYLQNW True PC9_epitope_Rep6 1208.6229954253201 1208.62188993586 94.618 2 -0.22752816804495757 0.05820568114217727 0.6725172094854028 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 87761 9078 QRDEKVLEL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 40.262 2 -0.2275429705047459 0.05820568114217727 0.6725420649738275 ['ENSG00000135968|ENST00000309863|GCC2'] 61463 19630 LIYRKLLP True PC9_epitope_Rep4 1014.6589870112199 1014.65788993586 83.623 2 -0.22755035618740507 0.05820568114217727 0.6725544649453481 ['chr8:40114873-40125442|196|46.56|0.21|7.78|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 17193 13064 EGSTQPLLS True PC9_epitope_Rep1 930.46582607758 930.4652749679301 55.119 1 -0.22755091464469776 0.05820568114217727 0.6725554025054431 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 82603 7048 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.4074249679301 32.037 1 -0.2275666388890152 0.05820568114217727 0.6725817983828868 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 76390 5441 NQDDLTHKL True PC9_epitope_Rep2 1082.5356369729002 1082.53452993586 26.321 2 -0.22761140988105674 0.05824069598840019 0.672656926748792 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 18335 2780 EISSHRYETP True H1975_Epitope_Rep2 1217.56766537717 1217.5660049037901 14.722 3 -0.2276467012898375 0.05824069598840019 0.6727161191148542 ['nc|ENSG00000141027|O75376-2|NCOR1'] 108746 17380 SYSFWLASL True PC9_epitope_Rep5 1072.52294703088 1072.52184993586 71.852 2 -0.2276846648531496 0.058258202435170554 0.6727797651133609 ['ENSG00000169031|ENST00000396578|COL4A3'] 111655 8831 TIEDLLYSE True H1975_Epitope_Rep1 1081.5179212200899 1081.5168299358602 38.891 2 -0.2277356759142521 0.05827570823109525 0.6728652392383893 ['ENSG00000247746|ENST00000500968|USP51'] 128132 18603 VPLLKIEEP True H1975_Epitope_Rep2 1036.6168474157198 1036.61574993586 77.206 2 -0.2278315521420597 0.058292129818952376 0.6730257467581713 ['ENSG00000243708|ENST00000458483|PLA2G4B', 'nc|ENSG00000243708|P0C869-8|PLA2G4B', 'nc|ENSG00000243708|P0C869-7|PLA2G4B', 'nc|ENSG00000243708|P0C869-6|PLA2G4B', 'nc|ENSG00000243708|P0C869-4|PLA2G4B'] 140091 18566 YQLKSDKPL True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 76.766 2 -0.22785568666841674 0.058292129818952376 0.6730661213408079 ['ENST00000379520.7_1_2:30369834-30371121:+|nuORF'] 90603 14886 REMIPFAVV True NCI_RA007_Epitope_Rep2 1060.57393705792 1060.57282993586 62.579 2 -0.22803885524906495 0.05830963400806707 0.6733721600060679 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 5542 16917 AMLAVLHTV True PC9_epitope_Rep4 953.5368232732101 953.53572993586 73.06 2 -0.22805126853766047 0.058324969331995095 0.6733928756795646 ['ENSG00000123395|ENST00000336854|ATG101'] 59146 8921 LEYWMRLRFP True NCI_RA007_Epitope_Rep4 1409.7278119303696 1409.72670993586 41.148 2 -0.22808631340044452 0.058324969331995095 0.6734513428597781 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-6|RPGRIP1'] 19277 8172 ELKKSTVIL True NCI_RA007_Epitope_Rep3 1029.6433965167298 1029.6422899358602 39.265 2 -0.22811016701114034 0.058324969331995095 0.6734911249427316 ['ASPM|p.F3079L|1|0.05|ENSG00000066279|chr1:197093109-197093109|A/T|missense_variant'] 73139 13316 MRRMRRRRRW True NCI_RA007_Epitope_Rep1 1558.8786246247398 1558.8775299358601 55.798 2 -0.22819309001522156 0.05836105793357248 0.6736293314935143 ['ENST00000281708.8_1_4:153271275-153332654:-|nuORF'] 24039 18758 EYNNIQHLF True PC9_epitope_Rep5 1176.5563724174801 1176.55526993586 77.163 2 -0.22820065929292838 0.058376389250269486 0.6736419402120383 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 55529 20275 LAGPAELL True PC9_epitope_Rep5 782.4538048418999 782.4532549679301 83.039 1 -0.22820578601210817 0.058376389250269486 0.6736504795221512 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 67598 18894 LSVETLLDV True PC9_epitope_Rep3 987.5488274255499 987.54772993586 77.899 2 -0.2282409657403221 0.058376389250269486 0.6737090623293176 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 31130 10004 GAVQWGLTL True PC9_epitope_Rep5 943.5127167003499 943.51160993586 43.458 2 -0.22831338247556388 0.05842888736085042 0.6738295756161561 ['ENST00000511959.1_1_4:5437650-5448758:+|nuORF'] 84674 9630 QDIWYHEDRIR True NCI_RA007_Epitope_Rep1 1529.73752466693 1529.73642993586 41.458 2 -0.22840248311895045 0.05842888736085042 0.6739777094036393 ['ENSG00000181610|ENST00000313608|MRPS23', 'ENST00000579768.1_1_17:55926599-55927356:-|nuORF'] 54237 5061 KWGNRWWRWRR True NCI_RA007_Epitope_Rep2 1685.8916147532498 1685.88997490379 24.312 3 -0.22840957892076666 0.05842888736085042 0.6739894996555355 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 55519 13869 LAGPAELL True H1975_Epitope_Rep1 782.4538048418999 782.4532549679301 58.496 1 -0.22846555695468598 0.05846388284923157 0.6740824763937057 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 99618 16948 SIFKNAIQL True PC9_epitope_Rep6 1032.59678067748 1032.59568993586 77.734 2 -0.22851195511331943 0.05846388284923157 0.6741594939516465 ['ENSG00000107960|ENST00000224950|STN1', 'ENST00000466828.5_1_10:105642444-105658073:-|nuORF'] 56133 13291 LAVHPSGVAL True PC9_epitope_Rep2 962.5549158654999 962.55380993586 56.402 2 -0.22853820731949726 0.05848137961792909 0.6742030516489836 ['ENSG00000187608|ENST00000649529|ISG15'] 69779 5909 LVFRNGDA True PC9_epitope_Rep6 890.4610154806599 890.45990993586 30.997 2 -0.2285556334328043 0.05849887573634623 0.674231957482688 ['ENSG00000183066|ENST00000328823|WBP2NL'] 87488 5504 QQEANLGT True PC9_epitope_Rep2 859.4035601741899 859.40246993586 26.564 2 -0.22861301963575786 0.05854592073725869 0.6743271049018927 ['ENSG00000163885|ENST00000352312|CFAP100', 'nc|ENSG00000163885|Q494V2-2|CFAP100'] 138504 12426 YHSEVPVSL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 59.225 2 -0.22863311281187088 0.05854592073725869 0.6743604042500833 ['ENSG00000115306|ENST00000356805|SPTBN1'] 30698 15035 GALEPHINAQI True PC9_epitope_Rep5 1161.61422164677 1161.6131299358601 62.836 2 -0.22864915615937864 0.05854592073725869 0.6743869862569374 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 29264 16924 FVADGIFK True PC9_epitope_Rep1 895.4803539429099 895.47924993586 69.923 2 -0.22866242501479747 0.05854592073725869 0.6744089673710159 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 19089 15268 ELGFHEGDVI True PC9_epitope_Rep2 1114.5294889632999 1114.52838993586 64.005 2 -0.22866551884329622 0.05854592073725869 0.6744140920864221 ['nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 81120 10938 PKEIHISV True PC9_epitope_Rep5 921.52836676449 921.52726993586 47.063 2 -0.2286723004526696 0.05854592073725869 0.6744253246918939 ['ENST00000528737.5_1_11:58911028-58911139:+|nuORF'] 63877 18662 LNNAVSINL True PC9_epitope_Rep1 956.52909504048 956.52798993586 76.571 2 -0.2286987694308614 0.05854592073725869 0.6744691573806536 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.I755Sfs*38|1|0.15|ENSG00000121871|chr3:165188569-165188569|G/-|frameshift_variant'] 121300 5501 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44962496793 26.211 1 -0.22870304164626404 0.05854592073725869 0.6744762308720942 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 61875 19635 LLCVYVWQI True PC9_epitope_Rep6 1135.60998821347 1135.6088899358601 88.186 2 -0.22872291459428343 0.058560148629818856 0.6745091296655403 ['ENST00000290551.4_1_1:203277319-203277361:+|nuORF'] 127099 4668 VLTEVDGK True NCI_RA007_Epitope_Rep5 859.4650978015899 859.46400993586 24.639 2 -0.22875614581883316 0.058560148629818856 0.6745641249484411 ['ENSG00000150656|ENST00000358821|CNDP1'] 107911 12536 SVVSGAVVAA True PC9_epitope_Rep2 858.4810822188999 858.47998993586 53.526 2 -0.22882007410626365 0.058560148629818856 0.6746698599309516 ['ENSG00000204592|ENST00000376630|HLA-E'] 101832 9677 SLPGSPPSIT True H1975_Epitope_Rep2 954.5022115863001 954.50110993586 42.203 2 -0.22883030712557073 0.058560148629818856 0.6746867774231271 ['ENST00000395105.8_1_15:74472186-74472399:-|nuORF'] 14337 3920 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 21.389 2 -0.22886329348352874 0.058572198175772326 0.6747412971744271 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 44297 20128 ILDEAYVMAYV True PC9_epitope_Rep4 1285.62642612325 1285.62532993586 85.557 2 -0.2288749991119344 0.058572198175772326 0.6747606390110445 ['ERBB2|p.Y772_A775dup|5|0.47|ENSG00000141736|chr17:39724728-39724729|-/GCATACGTGATG|inframe_insertion'] 45024 20118 IPFGITEEA True PC9_epitope_Rep3 975.49131254943 975.49020993586 82.635 2 -0.2289173972405026 0.058572198175772326 0.674830672964297 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 78430 13553 NYLSIFRKF True NCI_RA007_Epitope_Rep4 1186.6498788795 1186.6482449037899 59.337 3 -0.2289220309410014 0.058572198175772326 0.6748383248299047 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF'] 67110 8030 LSQKRMYRKFH True H1975_Epitope_Rep3 1492.8085218625597 1492.80688490379 35.86 3 -0.22896473704030115 0.058572198175772326 0.6749088275598011 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 74987 5238 NHQGGSVQL True PC9_epitope_Rep5 938.4569927293799 938.45588993586 25.163 2 -0.22903485270904453 0.058572198175772326 0.6750245019522898 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant', 'MACC1|p.D299Ifs*7|1|0.2|ENSG00000183742|chr7:20159466-20159466|C/-|frameshift_variant'] 171 14366 AADWHNLIL True NCI_RA007_Epitope_Rep3 1051.54507945779 1051.54398993586 63.819 2 -0.22917679287750695 0.05858968643186209 0.6752583724653675 ['ENST00000558523.1_1_14:102821996-102829188:-|nuORF', 'nc|ENSG00000100865|Q9BW66-2|CINP', 'ENST00000561468.5_1_14:102816372-102829233:-|nuORF', 'ENSG00000100865|ENST00000216756|CINP', 'nc|ENSG00000100865|Q9BW66-3|CINP'] 78929 13750 PAGSFLLT True NCI_RA007_Epitope_Rep3 804.43815477776 804.43760496793 61.409 1 -0.22924449308999442 0.05860064265681012 0.6753697800554486 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 66539 11359 LSHVLNQTL True PC9_epitope_Rep4 1023.5712942056299 1023.57018993586 51.467 2 -0.22924461566394544 0.05860064265681012 0.6753699816814693 ['ZNF536|p.G611V|1|0.12|ENSG00000198597|chr19:30445394-30445394|G/T|missense_variant'] 139386 18155 YLNDEELIT True PC9_epitope_Rep4 1108.52882025696 1108.5277299358602 77.897 2 -0.22927691570841544 0.05860064265681012 0.6754231028032914 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-4|SRCIN1'] 25440 6758 FEEAAGAAP True H1975_Epitope_Rep2 861.3868474808897 861.38574993586 30.909 2 -0.2292910033153686 0.05860064265681012 0.6754462650549939 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 66401 8663 LSGLDVSFCDK True H1975_Epitope_Rep1 1182.55907483942 1182.55796993586 38.252 2 -0.2293059327524701 0.05860064265681012 0.675470807146911 ['ENSG00000171823|ENST00000339235|FBXL14'] 134069 9684 VYKKYPNVF True PC9_epitope_Rep2 1156.6280808057597 1156.62643490379 42.589 3 -0.22930701331210926 0.05860064265681012 0.6754725832790983 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 114585 12693 TQDGTPITV True PC9_epitope_Rep2 930.4658260775799 930.46472993586 54.13 2 -0.22932303229923678 0.05860064265681012 0.6754989112365208 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 135781 24317 WMRLTPAGRR True PC9_epitope_Rep3 1242.6767794170198 1242.67513490379 98.847 3 -0.22941483465517531 0.05861812778603269 0.6756496954564444 ['ENST00000588685.1_1_19:56989432-56989657:+|nuORF'] 56105 10079 LATVTVRP True PC9_epitope_Rep1 855.5178020807899 855.51670993586 43.639 2 -0.22944222906723147 0.058635612265745436 0.6756946583779433 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 92747 6132 RPAAGFVA True PC9_epitope_Rep2 787.4340724568299 787.43296993586 28.981 2 -0.22946854256198548 0.05867057927678621 0.6757378333100219 ['ENSG00000141526|ENST00000582743|SLC16A3'] 113609 12714 TLVLLKTC True PC9_epitope_Rep2 889.5306752636101 889.52956993586 54.209 2 -0.22947227543323948 0.05867057927678621 0.6757439570700442 ['PDE10A|p.W446Cfs*60|1|0.33|ENSG00000112541|chr6:165396370-165396370|C/-|frameshift_variant'] 60082 5409 LGLNKTLAI True NCI_RA007_Epitope_Rep5 941.5909670210499 941.58986993586 27.494 2 -0.22962893910284246 0.058688061808186615 0.676000717115434 ['nc|ENSG00000285467|P0CG22|DHRS4L1', 'ENST00000559270.5_2_14:24507775-24520174:+|nuORF'] 47150 8897 ITVQKKRRDLK True NCI_RA007_Epitope_Rep2 1383.8674166376697 1383.86630993586 39.236 2 -0.2296313106833983 0.05872193436960276 0.6760046002693765 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 128921 13212 VQHRRQEELEP True NCI_RA007_Epitope_Rep2 1419.7218746027897 1419.72076993586 56.025 2 -0.22965722190204071 0.05872193436960276 0.6760470193517756 ['ENST00000290902.9_1_4:1166395-1166464:-|nuORF'] 131306 13874 VTGFGIQLQG True PC9_epitope_Rep3 1018.54474510462 1018.54364993586 58.448 2 -0.22966144148658418 0.05872193436960276 0.676053925963498 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1'] 96386 6519 RYVRSWMEP True PC9_epitope_Rep2 1222.5917123803797 1222.59007490379 30.491 3 -0.2297844702423531 0.05877437325905292 0.6762551465474006 ['ENSG00000128709|ENST00000249499|HOXD9'] 68611 11681 LTHTHTLSL True PC9_epitope_Rep4 1021.55564414149 1021.55454993586 52.693 2 -0.2297930854621482 0.05877437325905292 0.6762692261766731 ['ENST00000590846.1_1_18:31804054-31804756:-|nuORF', 'ENST00000588355.1_1_18:31804054-31804846:-|nuORF'] 126017 5687 VLDSNVKHF True NCI_RA007_Epitope_Rep1 1057.55564414149 1057.5545499358602 26.18 2 -0.22988396445466763 0.05877437325905292 0.676417659328295 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 34744 5945 GQEVNELKT True PC9_epitope_Rep5 1016.51383889916 1016.51274993586 27.862 2 -0.22989672529817057 0.05879185159049971 0.6764384888187602 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 111561 16113 TIAQLVHAV True PC9_epitope_Rep4 950.5549158654999 950.55380993586 69.916 2 -0.22991264193036717 0.05880823723840826 0.6764644650582096 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 9130 10857 AVKALVSSV True PC9_epitope_Rep1 872.53311779176 872.53202993586 46.647 2 -0.22994056057890197 0.05880823723840826 0.6765100169210285 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70-2|COL6A5'] 89236 18306 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48506993586 75.741 2 -0.2300497089955726 0.05882571396739332 0.6766879574757398 ['ENSG00000167658|ENST00000309311|EEF2'] 102352 7973 SLSVHPSNL True PC9_epitope_Rep4 952.4977949122 952.49668993586 38.114 2 -0.23013077193523884 0.05886175842540154 0.6768199619006804 ['ZNF382|p.K359Sfs*186|1|0.55|ENSG00000161298|chr19:36626969-36626969|G/-|frameshift_variant', 'ZNF382|p.K252N|1|0.08|ENSG00000161298|chr19:36626653-36626653|G/T|missense_variant', 'nc|ENSG00000161298|Q96SR6-3|ZNF382', 'nc|ENSG00000161298|Q96SR6-2|ZNF382', 'ENSG00000161298|ENST00000292928|ZNF382'] 28330 13651 FRRRRWRRRME True NCI_RA007_Epitope_Rep2 1703.9491467127098 1703.9475149037899 57.74 3 -0.23022589431598245 0.058894520878590394 0.6769746988767155 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 27795 5453 FQDDDQTRV True PC9_epitope_Rep2 1122.4941660837399 1122.4930699358601 26.371 2 -0.23025877491691352 0.058894520878590394 0.677028145580293 ['nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 127689 10216 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.4914349679301 44.284 1 -0.23027361306186536 0.058894520878590394 0.6770522578304253 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 59145 20804 LEYWMEDIYTP True PC9_epitope_Rep2 1458.6377190829398 1458.6366299358601 85.464 2 -0.23027893363992755 0.058894520878590394 0.6770609028300221 ['ENSG00000169330|ENST00000305428|MINAR1', 'ENST00000559272.1_1_15:79756054-79760723:+|nuORF'] 75897 7610 NLQTVNVDEN True NCI_RA007_Epitope_Rep4 1144.53603089572 1144.5349299358602 35.924 2 -0.230462735991881 0.05894912736724842 0.6773592143341539 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 95472 19038 RWLWRQRIRLY True PC9_epitope_Rep4 1644.9477326470399 1644.94662993586 81.318 2 -0.23054802259130874 0.05898078529657477 0.677497413958559 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 32515 13313 GGFDGTTYL True H1975_Epitope_Rep2 929.41306222873 929.4125149679301 56.339 1 -0.23057193015781602 0.05898078529657477 0.6775361290708184 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 229 19581 AAFTAFEEA True PC9_epitope_Rep1 955.4287122928698 955.42760993586 80.145 2 -0.23060131489948976 0.05898078529657477 0.6775836987245148 ['ENSG00000007080|ENST00000445755|CCDC124'] 94076 5565 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 26.484 2 -0.23061936761645296 0.05898078529657477 0.6776129152606056 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 57907 12104 LEGDRCLVL True PC9_epitope_Rep2 1016.5324661687599 1016.53136993586 51.867 2 -0.2306195297950012 0.05898078529657477 0.677613177702241 ['ENST00000546793.1_1_12:53439809-53447194:-|nuORF'] 138659 18680 YIHVHFLEV True PC9_epitope_Rep2 1155.60767971435 1155.60604490379 77.219 3 -0.23062729288824446 0.05899825492889763 0.6776257395567175 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 9413 22989 AVTGILVQL True PC9_epitope_Rep2 912.5644179200399 912.56332993586 93.921 2 -0.23066784879231608 0.05901243734917394 0.6776913463574974 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000487805.6_1_3:49750857-49758735:+|nuORF'] 66716 14272 LSLGAYNTTL True PC9_epitope_Rep5 1051.5549754351503 1051.5538699358601 59.901 2 -0.23069175748384044 0.05901243734917394 0.6777300084120086 ['SERPINA3|p.H92Y|1|0.13|ENSG00000196136|chr14:94614715-94614715|C/T|missense_variant'] 24480 9941 FAEGKPLEL True NCI_RA007_Epitope_Rep3 1002.5385970950198 1002.53750993586 46.184 2 -0.2307011842310423 0.05901243734917394 0.6777452491268204 ['ENSG00000134256|ENST00000682167|CD101'] 134526 2686 VYQPRGGWPRR True PC9_epitope_Rep5 1370.7319857940197 1370.73034490379 14.834 3 -0.23075493359397145 0.05901243734917394 0.6778321160689882 ['ENST00000371173.7_1_20:56179671-56185320:-|nuORF'] 94980 6208 RTNSTFNQV True PC9_epitope_Rep3 1065.5203212619301 1065.51922993586 28.919 2 -0.23085337048131072 0.059048467635648125 0.6779910616201189 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 76290 7266 NPNQYHYVA True PC9_epitope_Rep3 1104.49885754136 1104.49776993586 32.958 2 -0.23090898916364816 0.05906374132234473 0.6780807871185417 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A'] 9256 21269 AVPEVAVYL True PC9_epitope_Rep2 959.5327834385898 959.53168993586 87.271 2 -0.2309128297149055 0.05906374132234473 0.6780869806198799 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 118231 20357 TYLDNGVVF True PC9_epitope_Rep4 1026.5022115862998 1026.50110993586 86.445 2 -0.23091836679437433 0.05906374132234473 0.6780959095490611 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 70148 14793 LVPPDQPEV True PC9_epitope_Rep5 992.51786165044 992.51676993586 61.901 2 -0.23097941434431823 0.05907901330809065 0.6781943143192325 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 93951 27418 RRHLLFLRRSF True PC9_epitope_Rep3 1499.8949687981897 1499.89333490379 113.04 3 -0.23104712815040168 0.05907901330809065 0.6783033817608561 ['ENST00000308664.10_1_12:110719046-110719250:+|nuORF'] 17000 4666 EGARAPQSI True PC9_epitope_Rep2 927.47739382079 927.47628993586 23.32 2 -0.23104776104295943 0.05907901330809065 0.6783044007575345 ['ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A', 'ENST00000475339.1_1_2:220085171-220086945:-|nuORF'] 38971 16150 HHIYLEGTLL True PC9_epitope_Rep4 1194.6397081186199 1194.63805490379 70.06 3 -0.23109052695590673 0.05913140311804009 0.6783732389367754 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 43908 18306 IIAILTPKKHT True NCI_RA007_Epitope_Rep2 1233.7808930490498 1233.7797899358602 75.964 2 -0.2310986068351949 0.05913140311804009 0.6783862408206565 ['ENSG00000119729|ENST00000238738|RHOQ', 'ENST00000557531.1_1_14:50067143-50067293:+|nuORF', 'ENST00000437982.1_1_2:130970445-130970847:-|nuORF', 'ENST00000489471.5_3_2:46787807-46808219:+|nuORF'] 30977 7121 GASEASISSYP True H1975_Epitope_Rep2 1067.47711903727 1067.4760299358602 32.323 2 -0.2310987458953949 0.05913140311804009 0.6783864645810488 117888 17543 TWFTAGAKLLF True NCI_RA007_Epitope_Rep3 1253.68084465461 1253.6797499358602 76.971 2 -0.23115077648268884 0.059166326416985264 0.6784701607421935 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2'] 23307 16578 EVQKTEESKVP True PC9_epitope_Rep1 1272.6561460284 1272.65504993586 68.591 2 -0.2311635645427139 0.059166326416985264 0.6784907236986699 ['ENSG00000273136|ENST00000620612|NBPF26'] 10453 15880 C[Carbamidomethyl]IESLIAVFQK True H1975_Epitope_Rep1 1306.6955090220097 1306.6944099358602 66.393 2 -0.23120218598924686 0.05918378709425978 0.6785528074393389 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 48370 12783 IYTHQSDVW True PC9_epitope_Rep1 1147.5298233164701 1147.5287299358602 54.045 2 -0.23143485142500597 0.05925582258513501 0.6789262189444623 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000146648|ENST00000275493|EGFR'] 118142 20908 TYIPGTQITF True PC9_epitope_Rep4 1139.58627556343 1139.5857749679299 88.582 1 -0.231456722900262 0.05925582258513501 0.678961268578665 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 8346 13344 ATLAANNTQL True PC9_epitope_Rep2 1015.5298233164701 1015.52872993586 56.601 2 -0.2315084362188711 0.059272180674374154 0.6790441047467537 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant'] 27743 10341 FPSAAATAA True PC9_epitope_Rep1 805.39701824177 805.39592993586 44.659 2 -0.23151802470114155 0.059272180674374154 0.6790594583749479 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 56470 11242 LDEQCERLP True PC9_epitope_Rep2 1101.5124590001699 1101.51136993586 48.568 2 -0.2315530053362858 0.05928853754940711 0.6791154567132068 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'FLT1|p.V842Ffs*19|1|0.26|ENSG00000102755|chr13:28334094-28334094|C/-|frameshift_variant'] 77724 6520 NTLGISSIGP True NCI_RA007_Epitope_Rep5 957.51311062317 957.51200993586 31.744 2 -0.23161785826114706 0.05928853754940711 0.6792192149090298 ['ENST00000344096.3_1_12:68055799-68055877:+|nuORF'] 135588 19767 WLCALALSL True PC9_epitope_Rep1 988.54157430048 988.54046993586 80.86 2 -0.2318333217073037 0.05932344918446494 0.679563368497226 ['ENSG00000115884|ENST00000254351|SDC1'] 112522 10878 TLDTLSIYE True H1975_Epitope_Rep3 1053.52300660053 1053.52190993586 46.925 2 -0.2318365908037795 0.05932344918446494 0.6795685834389148 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B', 'ENST00000468250.1_1_7:2406190-2406681:+|nuORF', 'ENST00000466199.1_1_7:2406190-2411546:+|nuORF'] 68097 9496 LTDNRRSI True PC9_epitope_Rep5 973.53049202281 973.52938993586 41.482 2 -0.2318629434155192 0.05933870189631499 0.6796106144682937 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant'] 81542 9047 PLISRFMERNP True H1975_Epitope_Rep3 1358.7128901422197 1358.71123490379 39.787 3 -0.23188637803664247 0.05933870189631499 0.6796479805586614 ['ENSG00000162877|ENST00000367136|PM20D1'] 32697 6607 GGTEPVVE True NCI_RA007_Epitope_Rep3 786.37594844402 786.3753949679301 33.048 1 -0.2319051778392451 0.05933870189631499 0.6796779491000863 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 18202 9014 EILTPNSIPK True H1975_Epitope_Rep1 1110.62847472858 1110.62736993586 39.576 2 -0.23200881442468022 0.0594041037438314 0.6798430366070991 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 58820 8497 LESPVSSAIP True H1975_Epitope_Rep2 998.52842633414 998.5273299358599 37.638 2 -0.23202982739077863 0.0594041037438314 0.6798764847284945 ['ENST00000601780.5_1_19:50985512-50985971:+|nuORF'] 56170 15570 LAVVAGVAAE True PC9_epitope_Rep4 898.5123823471799 898.51128993586 67.81 2 -0.2320670516413442 0.0594041037438314 0.6799357175521754 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 34120 22163 GMLDGLVNV True PC9_epitope_Rep2 916.4688032830401 916.4682549679301 90.737 1 -0.23208578514781245 0.0594041037438314 0.6799655173603237 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-3|DNAJC10'] 94682 9849 RRYLRRLLLL True NCI_RA007_Epitope_Rep4 1370.8986571962998 1370.89702490379 44.73 3 -0.23208992198645248 0.0594041037438314 0.6799720970425077 ['ENSG00000141096|ENST00000268793|DPEP3'] 109651 15255 TEAPPIIFA True H1975_Epitope_Rep3 957.5171333744499 957.51602993586 64.085 2 -0.2321149895445806 0.0594041037438314 0.680011960433716 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 103119 6071 SPHPGLVAA True PC9_epitope_Rep2 847.4552018242299 847.45410993586 28.747 2 -0.23212463669119365 0.0594041037438314 0.6800272985839451 ['ENSG00000100393|ENST00000263253|EP300'] 100633 11512 SLDEFRQTWKL True PC9_epitope_Rep5 1421.73031402817 1421.72866490379 49.277 3 -0.23213826830246814 0.0594041037438314 0.6800489687496375 ['ENSG00000156194|ENST00000286719|PPEF2'] 63005 21576 LLPQGLPGL True PC9_epitope_Rep3 906.5538532363399 906.55274993586 88.286 2 -0.23219524260403157 0.05942155353134334 0.6801395034229861 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.G181Efs*69|1|0.35|ENSG00000204267|chr6:32837603-32837603|C/-|frameshift_variant'] 6543 13607 APTPGLLQ True PC9_epitope_Rep3 795.4490538146299 795.44794993586 57.404 2 -0.23220535973847556 0.05943900267141585 0.6801555736970484 ['ENSG00000021762|ENST00000263650|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5', 'ENST00000498536.5_1_11:3109437-3111932:-|nuORF'] 100726 14922 SLDTENIDEIL True PC9_epitope_Rep3 1260.60852712964 1260.6074299358602 62.532 2 -0.2324635596931816 0.05947279574081288 0.6805650627195035 ['ENSG00000023318|ENST00000262455|ERP44'] 89130 12615 QVQTTLVAL True PC9_epitope_Rep4 971.5651461960299 971.56404993586 56.362 2 -0.232500669351888 0.05947279574081288 0.6806238150916547 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 68566 17619 LTGTAIYQV True PC9_epitope_Rep5 964.5229470308801 964.52184993586 72.781 2 -0.2325120316588148 0.05947279574081288 0.6806417989297949 ['nc|ENSG00000137868|Q9BX79-5|STRA6', 'ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6'] 29146 20445 FTPDVKVWEV True PC9_epitope_Rep1 1218.62847472858 1218.62736993586 83.451 2 -0.23253707788561775 0.059508792758032204 0.6806814327679559 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 55432 19143 LAFEGPILL True H1975_Epitope_Rep3 971.5691689473098 971.5686249679301 80.269 1 -0.23259143117297196 0.059563338218108296 0.6807674031718238 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.I1609Mfs*13|1|0.25|ENSG00000188994|chr6:87258456-87258457|AA/-|frameshift_variant', 'ZNF292|p.L1719Ffs*6|1|0.39|ENSG00000188994|chr6:87258778-87258779|-/C|frameshift_variant', 'ZNF292|p.L434Tfs*10|1|0.31|ENSG00000188994|chr6:87254927-87254928|-/A|frameshift_variant', 'ZNF292|p.H563Afs*10|1|0.12|ENSG00000188994|chr6:87255315-87255316|-/GCCCATT|frameshift_variant'] 132742 17351 VVIGAVVAA True PC9_epitope_Rep5 797.50108938749 797.49998993586 71.739 2 -0.2326088278351392 0.05959712123460454 0.6807949079272297 ['ENSG00000234745|ENST00000412585|HLA-B'] 64900 14270 LQEDPPVGV True PC9_epitope_Rep1 952.4865615221598 952.48601496793 59.713 1 -0.23262077684171945 0.05959712123460454 0.6808137965168458 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 66455 11148 LSGRVTLLLN True NCI_RA007_Epitope_Rep4 1084.6604435631998 1084.65934993586 49.755 2 -0.232634884320126 0.05959712123460454 0.6808360937675172 ['ENST00000361127.5_1_1:113666969-113667131:+|nuORF'] 142230 12477 YWMHVQNTF True NCI_RA007_Epitope_Rep4 1224.53861417836 1224.53750993586 55.002 2 -0.2327134685322749 0.0596134584708981 0.680960231330661 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 42114 10139 IDLSSSARQEA True NCI_RA007_Epitope_Rep2 1175.57823006087 1175.57712993586 44.027 2 -0.23284211751943168 0.0596134584708981 0.6811632105002335 ['VSX1|p.T336A|1|0.19|ENSG00000100987|chr20:25076353-25076353|T/C|missense_variant'] 117030 6909 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 33.8 2 -0.23288354131717864 0.05966688923510646 0.6812285034428444 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 36826 5897 GVLGAVEG True NCI_RA007_Epitope_Rep5 700.3755545212 700.3750049679301 29.37 1 -0.23291347832737205 0.05966688923510646 0.6812756711731037 ['XKR6|p.G192V|1|0.24|ENSG00000171044|chr8:11200765-11200765|C/A|missense_variant'] 78015 14299 NVQGIIEILK True NCI_RA007_Epitope_Rep1 1125.6757592741699 1125.67466993586 59.659 2 -0.23304851556207404 0.059739970695698946 0.6814882278776815 ['ENSG00000138095|ENST00000260665|LRPPRC', 'LRPPRC|p.M465Ifs*9|1|0.25|ENSG00000138095|chr2:43963681-43963682|-/A|frameshift_variant'] 83267 10343 PTAEGLAAAA True PC9_epitope_Rep2 870.4446967101799 870.44358993586 45.11 2 -0.23316179155169117 0.059756301118344186 0.6816662748436805 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 2842 5261 AEVDVRTHSIK True NCI_RA007_Epitope_Rep1 1253.67279915205 1253.67115490379 24.547 3 -0.23323143044757516 0.059756301118344186 0.6817756173447809 ['ENST00000607947.1_1_20:1340372-1341782:+|nuORF'] 14339 4285 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 23.062 2 -0.23333644801391046 0.05979117597967397 0.6819403427955715 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 132661 7176 VVGAPGGQSL True PC9_epitope_Rep2 883.4763311916299 883.4752299358599 32.994 2 -0.23337887942831637 0.05979117597967397 0.6820068419956158 ['ENSG00000139531|ENST00000266971|SUOX'] 30882 9372 GAPQVVAVTG True PC9_epitope_Rep4 897.4919812557698 897.4914349679301 43.658 1 -0.23340551996593709 0.059807503291730804 0.682048576836063 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 18327 14800 EISPHDLSL True PC9_epitope_Rep1 1009.50802524273 1009.50692993586 61.748 2 -0.23340574350205734 0.059807503291730804 0.6820489269715729 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 85375 10795 QEVAVKEQLT True H1975_Epitope_Rep3 1143.6135529404298 1143.61244993586 46.602 2 -0.23342966800432793 0.05982272002373623 0.682086395864142 ['ENSG00000197892|ENST00000524189|KIF13B'] 70150 12855 LVPPDQPEV True PC9_epitope_Rep6 992.51786165044 992.51676993586 60.964 2 -0.23343591498011 0.05982272002373623 0.6820961777407017 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 118828 19964 VAALEQQVL True PC9_epitope_Rep1 969.5494961318899 969.54838993586 81.616 2 -0.23347185931311198 0.05982272002373623 0.6821524477659412 ['TBC1D2|p.A616Pfs*41|1|0.12|ENSG00000095383|chr9:98208972-98208972|C/-|frameshift_variant', 'nc|ENSG00000095383|Q9BYX2-4|TBC1D2', 'TBC1D2|p.I743Hfs*4|1|0.29|ENSG00000095383|chr9:98203331-98203332|AT/-|frameshift_variant', 'nc|ENSG00000095383|Q9BYX2-3|TBC1D2', 'nc|ENSG00000095383|Q9BYX2-2|TBC1D2', 'ENSG00000095383|ENST00000465784|TBC1D2'] 69913 16240 LVIVHPEVT True PC9_epitope_Rep3 1005.58588164061 1005.58478993586 67.605 2 -0.2334825985069992 0.059837935062767716 0.6821692552014398 ['ENSG00000179409|ENST00000319004|GEMIN4'] 90723 11632 REQWWRWNRWP True NCI_RA007_Epitope_Rep2 1698.8280114371796 1698.8269099358602 49.839 2 -0.233500679243985 0.059837935062767716 0.6821975478589716 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 138441 14228 YHKVQVIIF True PC9_epitope_Rep5 1145.6597152872098 1145.65807490379 59.734 3 -0.23350725118845878 0.059837935062767716 0.6822078301474319 ['OR13F1|p.P21H|1|0.35|ENSG00000186881|chr9:104504324-104504324|C/A|missense_variant'] 134651 11517 VYSQIPAAVKL True NCI_RA007_Epitope_Rep5 1187.6914093383098 1187.6903099358601 50.95 2 -0.23353942908141578 0.05984981922684713 0.6822581635762393 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 39926 12816 HPHCCLLWTP True PC9_epitope_Rep1 1205.54740504025 1205.54575490379 54.171 3 -0.2335750768479836 0.05984981922684713 0.6823139028779476 ['ENST00000462054.6_2_X:53295593-53296058:-|nuORF'] 47958 6558 IYIVDRRFRSP True PC9_epitope_Rep6 1420.7939173442398 1420.79227490379 33.911 3 -0.23357926032290635 0.05984981922684713 0.6823204427119265 ['ENSG00000111713|ENST00000261195|GYS2'] 99498 9594 SIDEVVEK True NCI_RA007_Epitope_Rep1 917.4705771048499 917.46948993586 41.315 2 -0.23359778637063622 0.05984981922684713 0.6823493998431548 ['nc|ENSG00000132359|Q684P5-3|RAP1GAP2', 'nc|ENSG00000132359|Q684P5-2|RAP1GAP2', 'ENSG00000132359|ENST00000254695|RAP1GAP2'] 18909 12835 ELEDTFLQAQP True H1975_Epitope_Rep2 1289.61394686325 1289.6128499358601 54.479 2 -0.23359842843568418 0.05984981922684713 0.6823504033118916 ['ENSG00000185002|ENST00000332958|RFX6', 'RFX6|p.W295Cfs*49|1|0.24|ENSG00000185002|chr6:116916226-116916226|G/-|frameshift_variant', 'RFX6|p.W356Cfs*14|1|0.09|ENSG00000185002|chr6:116919181-116919182|GG/-|frameshift_variant', 'RFX6|p.E632Sfs*9|1|0.26|ENSG00000185002|chr6:116927034-116927034|G/-|frameshift_variant'] 6098 23195 APLVTLEVL True PC9_epitope_Rep3 953.57973363101 953.57862993586 94.489 2 -0.23360700609388013 0.05984981922684713 0.6823638084255018 ['ENSG00000125872|ENST00000378858|LRRN4'] 83029 11578 PSKTIPGL True PC9_epitope_Rep1 811.4803539429099 811.47924993586 49.413 2 -0.2336628687475353 0.05986725007416197 0.6824510778732101 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 33154 14890 GIVCTLCIP True H1975_Epitope_Rep2 917.4714461353299 917.47034993586 62.428 2 -0.23383212202210002 0.05994030072121179 0.6827151456875008 ['ENST00000285021.11_1_3:14193875-14197868:-|nuORF'] 86369 13398 QKARWLIP True NCI_RA007_Epitope_Rep5 1010.6025347642599 1010.60142993586 58.222 2 -0.23392455359023864 0.05995772924468835 0.6828591401278699 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-3|ACAD10', 'ENST00000508303.5_1_12:112159488-112186840:+|nuORF'] 75977 19623 NLVEELQSV True PC9_epitope_Rep5 1029.5342399905699 1029.5331499358601 80.532 2 -0.2339329137975367 0.05997404523544679 0.682872156536833 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-2|ADGRV1'] 16151 4888 EEDEKWKMSP True H1975_Epitope_Rep2 1277.55980311541 1277.55814490379 23.886 3 -0.23396785370940393 0.05997404523544679 0.6829265426554892 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 75752 15325 NLLLLYLQHNR True H1975_Epitope_Rep1 1395.79866837151 1395.79756993586 64.216 2 -0.23400988517521285 0.060006673587423995 0.6829919383393347 ['PRELP|p.D201Y|2|0.11|ENSG00000188783|chr1:203483785-203483785|G/T|missense_variant'] 106991 15364 SVENKIVSL True PC9_epitope_Rep3 987.56006081559 987.55896993586 64.255 2 -0.23402100413214408 0.060006673587423995 0.683009232769417 ['ENST00000494463.1_1_1:160606951-160616738:-|nuORF', 'nc|ENSG00000117090|Q13291-2|SLAMF1', 'nc|ENSG00000117090|Q13291-3|SLAMF1', 'ENSG00000117090|ENST00000302035|SLAMF1', 'nc|ENSG00000117090|Q13291-4|SLAMF1'] 74400 14104 NESGELVAI True PC9_epitope_Rep5 930.4658260775799 930.46472993586 59.261 2 -0.23402146411785593 0.060006673587423995 0.6830099481838933 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 46063 10038 ISGQEGMQV True PC9_epitope_Rep3 947.4382314307499 947.43712993586 43.567 2 -0.2340505337490994 0.060006673587423995 0.6830551524482957 ['ENST00000517815.1_1_5:160030929-160033886:-|nuORF'] 28297 12638 FRQQRPLEF True PC9_epitope_Rep1 1219.6461904813898 1219.64455490379 53.482 3 -0.2340720657074426 0.06004152300448597 0.6830886256680386 ['ENSG00000089693|ENST00000203630|MLF2'] 89657 9903 QYVDFHNQL True NCI_RA007_Epitope_Rep3 1162.54072235334 1162.5396299358601 46.035 2 -0.23410161584901001 0.06004152300448597 0.6831345503799784 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 110882 15178 TGSFYQSL True PC9_epitope_Rep4 901.4181476091699 901.41704993586 66.307 2 -0.23414570018872916 0.060058946744026544 0.6832030342181785 ['ENST00000584706.1_1_18:678488-685971:-|nuORF'] 56190 6462 LAWPHGGRSRS True NCI_RA007_Epitope_Rep5 1222.63193739958 1222.6308499358602 31.52 2 -0.23417943156027476 0.0600915645678486 0.6832554116624491 ['ENST00000403325.5_1_22:19841974-19842145:-|nuORF'] 69357 2838 LTVRGRSWCWR True NCI_RA007_Epitope_Rep1 1418.7353569222998 1418.73370490379 14.863 3 -0.23418585226804647 0.0600915645678486 0.683265379327123 ['ENST00000422053.3_1_20:368928-376885:+|nuORF'] 10454 15879 C[Carbamidomethyl]IESLIAVFQK True H1975_Epitope_Rep3 1306.6955090220097 1306.6944099358602 66.527 2 -0.23427976997338876 0.0600915645678486 0.6834110958415001 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 127369 5117 VMYAFCRVK True NCI_RA007_Epitope_Rep5 1115.5619924752298 1115.5608899358601 26.38 2 -0.23430424427852697 0.0600915645678486 0.6834490428644897 ['nc|ENSG00000136279|Q9UJU6-6|DBNL', 'ENSG00000136279|ENST00000448521|DBNL', 'nc|ENSG00000136279|Q9UJU6-2|DBNL', 'nc|ENSG00000136279|Q9UJU6-3|DBNL', 'ENST00000458579.5_1_7:44091436-44097592:+|nuORF', 'DBNL|p.E170Dfs*2|1|0.1|ENSG00000136279|chr7:44057814-44057815|TG/-|frameshift_variant', 'DBNL|p.Q150Rfs*132|1|0.15|ENSG00000136279|chr7:44056876-44056876|C/-|frameshift_variant'] 117972 22124 TYASQRWRRR True PC9_epitope_Rep1 1378.73304842318 1378.73140490379 89.912 3 -0.2343890886066166 0.060142711518858305 0.6835805105336957 ['ENSG00000070388|ENST00000215530|FGF22'] 80905 8037 PHYPTPPAP True PC9_epitope_Rep1 975.4814165720699 975.48030993586 35.736 2 -0.2344147875243245 0.060142711518858305 0.6836203062990865 ['ENSG00000271503|ENST00000651122|CCL5'] 79439 21534 PAVAKNYSV True PC9_epitope_Rep1 947.50763131991 947.50652993586 87.659 2 -0.23442744794779244 0.060142711518858305 0.6836399071618163 ['ENSG00000137509|ENST00000313010|PRCP', 'nc|ENSG00000137509|P42785-2|PRCP'] 111686 16648 TIETYKNIESY True H1975_Epitope_Rep2 1359.6558116752299 1359.6547099358602 69.267 2 -0.23444948169420102 0.060142711518858305 0.6836740130476588 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'LRP12|p.D244*|1|0.14|ENSG00000147650|chr8:104497822-104497823|-/A|frameshift_variant'] 66922 16897 LSNQLHWPKIP True PC9_epitope_Rep3 1331.7350054857898 1331.73334490379 70.151 3 -0.2345007971215433 0.06015790058934727 0.68375341062496 ['LRRIQ1|p.S1543Ifs*14|1|0.13|ENSG00000133640|chr12:85153747-85153748|-/ATCTTGAAAGGCAATAAAAGTC|frameshift_variant', 'nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1'] 117547 13941 TVSFSTQAP True PC9_epitope_Rep2 936.4552613938798 936.45416993586 58.903 2 -0.2345011225762048 0.06015790058934727 0.6837539140350414 ['ENST00000399423.8_1_14:24711613-24711790:-|nuORF'] 104004 14477 SQDEQNELLK True PC9_epitope_Rep3 1202.5778957076998 1202.5762649037902 60.794 3 -0.23453167920453272 0.06015790058934727 0.6838011704089794 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128441244-128446479:+|nuORF'] 18600 10509 EKRNTRKQFWK True PC9_epitope_Rep3 1519.83717913855 1519.83553490379 45.361 3 -0.23456257269666161 0.06017420311341735 0.6838489310201484 ['ENST00000435033.1_1_19:12491157-12492084:-|nuORF'] 142256 13413 YWRRREEEERW True NCI_RA007_Epitope_Rep5 1693.80733556225 1693.80622993586 58.278 2 -0.23458328207251855 0.06017420311341735 0.6838809378163453 ['ENSG00000056097|ENST00000265069|ZFR'] 77587 18682 NTDRSWLI True PC9_epitope_Rep2 1003.5086939490699 1003.50758993586 77.228 2 -0.23465198334413326 0.06019161987361243 0.683987063099028 ['ENSG00000118997|ENST00000312428|DNAH7'] 62336 11630 LLGGIVAA True NCI_RA007_Epitope_Rep3 712.44832553864 712.4477749679301 52.868 1 -0.23481252387511736 0.06028092802609147 0.6842347325519939 ['ENSG00000119227|ENST00000412723|PIGZ', 'PIGZ|p.L357Pfs*26|1|0.32|ENSG00000119227|chr3:196947820-196947827|GGCACCCA/-|frameshift_variant'] 38465 6368 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 33.073 2 -0.2348222661275375 0.06028092802609147 0.6842497476007032 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 119911 3625 VDKTRDTLPPQ True NCI_RA007_Epitope_Rep5 1268.67246479888 1268.6708249037902 19.914 3 -0.23485461700804958 0.06028092802609147 0.6842995958208551 ['ENSG00000166669|ENST00000562102|ATF7IP2'] 10961 13287 DAIITQQLVKD True H1975_Epitope_Rep1 1242.68196685342 1242.68086993586 56.211 2 -0.23496564491051822 0.06031687204669693 0.6844705352679777 ['nc|ENSG00000177853|Q6AHZ1-2|ZNF518A', 'ZNF518A|p.I1208Vfs*15|1|0.07|ENSG00000177853|chr10:96159943-96159944|-/GTGTTCCTTC|frameshift_variant', 'ENSG00000177853|ENST00000316045|ZNF518A'] 107239 12504 SVKDGSQYFV True PC9_epitope_Rep5 1128.54513902744 1128.5440499358601 53.095 2 -0.2350417319149467 0.060369107619329974 0.6845875551913781 ['ENSG00000139117|ENST00000331366|CPNE8', 'ENST00000546603.5_1_12:39047686-39073432:-|nuORF', 'nc|ENSG00000139117|Q86YQ8-2|CPNE8', 'ENST00000552259.5_1_12:39040880-39073423:-|nuORF'] 45997 15615 ISFNNQLAL True PC9_epitope_Rep5 1018.5447451046199 1018.54364993586 65.074 2 -0.2351311226494772 0.060369107619329974 0.6847249071166596 ['nc|ENSG00000174776|Q8IV35-3|CFAP337', 'ENSG00000174776|ENST00000682715|WDR49', 'ENST00000460448.5_1_3:167254737-167322194:-|nuORF'] 55525 20343 LAGPAELL True PC9_epitope_Rep1 782.4538048418999 782.4532549679301 83.081 1 -0.23518401281721224 0.060369107619329974 0.6848061092553762 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 33505 14020 GLDLQACIDL True H1975_Epitope_Rep1 1059.52704643515 1059.5259499358601 59.089 2 -0.23524492510497863 0.06038316163936856 0.6848995675719773 ['ENSG00000144821|ENST00000693548|MYH15'] 5437 13205 ALVDKRVAP True PC9_epitope_Rep1 967.5814649665099 967.58036993586 55.656 2 -0.23530975547393976 0.06038316163936856 0.684998966787284 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENST00000587198.1_1_18:59947574-59954602:+|nuORF'] 44407 17705 ILGCFWLLL True PC9_epitope_Rep4 1076.60925993748 1076.6081699358601 76.126 2 -0.23536954997217285 0.06038316163936856 0.6850905804151335 ['ENST00000517938.5_2_5:154214216-154230085:-|nuORF'] 63321 19804 LLSWPELEP True PC9_epitope_Rep3 1082.5648118428599 1082.56370993586 81.408 2 -0.2353832570156805 0.06038316163936856 0.685111572834836 ['ENST00000457542.6_2_15:42118039-42118483:+|nuORF'] 140187 6524 YQTKYEDL True NCI_RA007_Epitope_Rep3 1058.49204082542 1058.49094993586 32.703 2 -0.23545848767191901 0.06040057065569822 0.685226731265227 ['KRT75|p.E348D|1|0.04|ENSG00000170454|chr12:52428735-52428735|C/G|missense_variant'] 34736 4940 GQENLKTDL True PC9_epitope_Rep4 1016.51383889916 1016.51274993586 25.605 2 -0.23559125755728627 0.060455033905213625 0.6854297291476485 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'STRN4|p.V351Sfs*20|1|0.27|ENSG00000090372|chr19:46727996-46727996|C/-|frameshift_variant'] 2905 8769 AEWPSHVP True H1975_Epitope_Rep3 921.43446637965 921.43336993586 38.736 2 -0.23563908448836368 0.060489847339558325 0.6855027796068779 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ENST00000573536.1_1_17:3920391-3920838:-|nuORF'] 2994 16479 AFIEKHWTF True PC9_epitope_Rep2 1177.59202965021 1177.5903749037902 68.628 3 -0.2356495329347957 0.060489847339558325 0.6855187332479195 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 14979 21191 DYGNGFGGF True PC9_epitope_Rep1 932.3664463894798 932.3658949679301 86.347 1 -0.23565927061941888 0.06050725308927877 0.6855335999456261 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 135076 8007 WEDDLNRI True H1975_Epitope_Rep2 1059.49852318819 1059.49742993586 35.746 2 -0.23569889332173763 0.06054318426025418 0.6855940758546634 ['CASQ2|p.G267R|1|0.18|ENSG00000118729|chr1:115717879-115717879|C/T|missense_variant'] 132564 15312 VVEIRNFL True PC9_epitope_Rep2 988.57056592964 988.56946993586 64.179 2 -0.23570591297818885 0.06056058837696141 0.6856047871090667 ['ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 127798 14475 VPEDEILTV True PC9_epitope_Rep5 1013.52809198097 1013.52698993586 60.678 2 -0.2358053096768003 0.060577991848832904 0.6857563653645904 ['ENSG00000110318|ENST00000263468|CEP126'] 5800 14621 APEEHAVLV True PC9_epitope_Rep5 963.5025459394698 963.50144993586 61.24 2 -0.23589238812984703 0.06061167404553285 0.6858890196240212 ['ENSG00000187003|ENST00000333999|ACTL7A'] 46898 19090 ITLRDEISI True PC9_epitope_Rep3 1058.5971746003 1058.5960699358602 78.653 2 -0.23589242803302932 0.06061167404553285 0.6858890803823569 ['nc|ENSG00000148297|Q15528-2|MED22', 'ENSG00000148297|ENST00000343730|MED22'] 77699 19480 NTIVTVYNV True PC9_epitope_Rep1 1021.54441075145 1021.54330993586 79.747 2 -0.2359139311305117 0.06061167404553285 0.6859218179891031 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 131912 7372 VTRQTYII True PC9_epitope_Rep2 992.5654805492 992.56438993586 33.738 2 -0.23591507776299916 0.06062907528156491 0.6859235634696882 ['nc|ENSG00000154188|Q15389-2|ANGPT1', 'ENSG00000154188|ENST00000517746|ANGPT1'] 1699 17639 AEGLTLAQV True PC9_epitope_Rep1 900.4916469025999 900.49054993586 72.642 2 -0.23608448740048824 0.06070092246137888 0.6861812040219278 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 128318 13424 VPPPPTPPP True PC9_epitope_Rep5 897.4960040070499 897.49490993586 56.651 2 -0.2360933074674856 0.06070092246137888 0.6861946043326801 ['ENSG00000136367|ENST00000419474|ZFHX2'] 104523 8066 SQNMWKRMWRT True PC9_epitope_Rep5 1522.7285572896997 1522.72690490379 35.963 3 -0.23611891570874943 0.0607138226741494 0.6862335033975823 ['ENST00000373491.3_1_6:37259064-37280717:+|nuORF'] 46602 11627 ITDDLHFY True H1975_Epitope_Rep1 1022.47091145802 1022.4698099358601 49.713 2 -0.236182358372 0.0607138226741494 0.6863298252297042 ['ENSG00000197157|ENST00000354725|SND1', 'SND1|p.H839Mfs*18|1|0.2|ENSG00000197157|chr7:128089581-128089581|C/-|frameshift_variant'] 2601 11776 AERLWRLP True H1975_Epitope_Rep1 1039.5926983565498 1039.59160993586 50.288 2 -0.2362600738473538 0.0607138226741494 0.6864477238069703 ['ENST00000419769.6_1_10:127408273-127409798:+|nuORF'] 124304 6662 VGTPGNSSVP True H1975_Epitope_Rep2 913.45051036661 913.44940993586 30.533 2 -0.2362868653853749 0.0607138226741494 0.6864883443264415 ['ENST00000602967.5_1_10:81610043-81610133:+|nuORF'] 64256 11869 LPHGFTNMA True PC9_epitope_Rep4 986.4643866089401 986.46328993586 53.429 2 -0.23632082293655932 0.0607138226741494 0.6865398123024233 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 47918 9176 IYIKQIKTF True NCI_RA007_Epitope_Rep4 1152.6906810623198 1152.6890249037901 42.135 3 -0.23633763144355566 0.06072447127671395 0.6865652810140849 ['ENSG00000103479|ENST00000262133|RBL2'] 74924 14310 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69592490379 66.941 3 -0.23634012578302008 0.06072447127671395 0.6865690600992628 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 16555 10708 EELSIKLDP True PC9_epitope_Rep1 1042.55464108198 1042.55354993586 46.077 2 -0.23636470508870372 0.06072447127671395 0.6866062937163245 ['ENSG00000189233|ENST00000413272|NUGGC'] 20029 11482 ELYSQQHRQR True H1975_Epitope_Rep3 1343.66944510711 1343.66779490379 49.288 3 -0.23639656824280542 0.06072447127671395 0.686654545997591 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 7925 6967 ATAPPAPAY True NCI_RA007_Epitope_Rep3 857.42831837005 857.4277649679301 34.511 1 -0.23639909787970498 0.06072447127671395 0.6866583760445597 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 79014 10518 PALALAAT True PC9_epitope_Rep6 726.4275900940601 726.4270449679301 51.246 1 -0.23640996214172053 0.06072447127671395 0.6866748240696404 ['ENST00000551489.5_1_12:107349705-107350883:+|nuORF'] 68220 5809 LTEAAPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 27.335 2 -0.2364407257537858 0.06072447127671395 0.6867213880640267 ['ENSG00000188766|ENST00000691638|SPRED3'] 78633 13474 NYTDIKDYL True NCI_RA007_Epitope_Rep5 1143.54480467427 1143.54370993586 58.512 2 -0.2365509601218667 0.060739615933038275 0.6868881086926099 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 55926 16195 LARDSLAL True PC9_epitope_Rep1 857.4970666362099 857.49596993586 67.111 2 -0.23657154144460563 0.060739615933038275 0.6869192136637456 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.A128S|1|0.29|ENSG00000137642|chr11:121470103-121470103|G/T|missense_variant'] 20586 15814 EPSLASTLG True PC9_epitope_Rep4 873.44436235701 873.44326993586 68.753 2 -0.23657357287553465 0.060739615933038275 0.6869222834209496 ['ENST00000498004.5_1_X:15768244-15782785:+|nuORF'] 125878 18282 VLAPSLVVA True PC9_epitope_Rep6 867.5429541994699 867.54184993586 82.965 2 -0.2366180626315306 0.06075700899966668 0.6869894958823138 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3', 'ENST00000497918.5_1_2:220033318-220033813:-|nuORF', 'nc|ENSG00000213901|Q6PIS1-2|SLC23A3'] 108330 10570 SYKNSGVVVL True NCI_RA007_Epitope_Rep5 1064.5866099165999 1064.58550993586 47.293 2 -0.23668963030173007 0.06076764983613842 0.687097546416397 ['nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7', 'ENST00000532500.1_1_16:89651241-89653999:+|nuORF'] 22087 9483 ESPEVTQNP True H1975_Epitope_Rep3 999.45090428943 999.44980993586 41.481 2 -0.23672658741476393 0.06076764983613842 0.6871533094849516 ['ENSG00000164309|ENST00000446378|CMYA5'] 22628 7607 ETMSLADSLY True H1975_Epitope_Rep2 1128.50089125696 1128.49978993586 34.213 2 -0.23673074747043038 0.06076764983613842 0.6871595849913613 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 68221 5904 LTEAAPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 27.696 2 -0.2367440533799607 0.06076764983613842 0.6871796552128013 ['ENSG00000188766|ENST00000691638|SPRED3'] 141574 9584 YTPHRGRLW True PC9_epitope_Rep3 1184.6203100867199 1184.6186549037902 41.816 3 -0.2367460337629294 0.06076764983613842 0.6871826421080489 ['ENSG00000103671|ENST00000261884|TRIP4', 'ENST00000560567.5_1_15:64710826-64716404:+|nuORF'] 136919 7242 YAGAKFSDP True NCI_RA007_Epitope_Rep2 954.4446967101799 954.44358993586 32.789 2 -0.23675097835331085 0.06076764983613842 0.6871900994569847 ['ENSG00000146278|ENST00000336032|PNRC1', 'nc|ENSG00000146278|Q12796-2|PNRC1'] 107897 16209 SVVQGTLGV True PC9_epitope_Rep3 858.4810822188999 858.47998993586 67.484 2 -0.23676913232064747 0.06076764983613842 0.6872174754648692 ['ENSG00000163872|ENST00000305135|YEATS2'] 33825 18276 GLNDLLNV True PC9_epitope_Rep5 856.46543215476 856.4648849679301 75.311 1 -0.23681585290978296 0.06080355489724125 0.6872879043537028 ['nc|ENSG00000018280|P49279-2|SLC11A1', 'ENSG00000018280|ENST00000233202|SLC11A1', 'ENST00000490536.1_1_2:219257709-219258917:+|nuORF'] 136196 10929 WRRWCWRWPWR True NCI_RA007_Epitope_Rep2 1772.8735221609597 1772.87188490379 47.118 3 -0.2368892202626606 0.060820943881801856 0.6873984283846859 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 77240 23781 NRWWRWRRARW True PC9_epitope_Rep3 1727.9134128269898 1727.91230993586 96.758 2 -0.23697275547874927 0.06083833222246908 0.687524160628777 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 79114 2642 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 14.814 2 -0.23698076817597527 0.06085571991927869 0.6875362147651596 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 82642 14500 PQLFQSTI True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49562993586 64.342 2 -0.23709391286947698 0.06088936611374408 0.687706313519171 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 43907 18148 IIAILTPKKHT True NCI_RA007_Epitope_Rep1 1233.7808930490498 1233.7797899358602 74.735 2 -0.23713013213858405 0.06088936611374408 0.6877607197689884 ['ENSG00000119729|ENST00000238738|RHOQ', 'ENST00000557531.1_1_14:50067143-50067293:+|nuORF', 'ENST00000437982.1_1_2:130970445-130970847:-|nuORF', 'ENST00000489471.5_3_2:46787807-46808219:+|nuORF'] 128550 12691 VPTAFSSSVP True H1975_Epitope_Rep1 990.5022115863 990.50110993586 53.872 2 -0.2371750087221888 0.06088936611374408 0.6878281003589605 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'NXF3|p.L509I|1|0.38|ENSG00000147206|chrX:103077673-103077673|G/T|missense_variant'] 31263 9106 GDFC[Carbamidomethyl]IQVGR True H1975_Epitope_Rep1 1050.49166426537 1050.49056993586 39.93 2 -0.23732069465287914 0.06092413639897812 0.6880466132660016 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF'] 45967 11817 ISERQAEVL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 50.784 2 -0.23735754705448825 0.06092413639897812 0.6881018323647358 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 38103 5914 HAYDGKDYI True NCI_RA007_Epitope_Rep4 1080.48762415132 1080.48652993586 29.37 2 -0.2374034926594212 0.06093926436015624 0.6881706452841336 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'nc|ENSG00000206341|P01893|HLA-H'] 74700 15603 NGTDLQLRLVN True H1975_Epitope_Rep3 1241.67279915205 1241.67170993586 65.433 2 -0.23741233302542603 0.06093926436015624 0.688183881554196 ['CD163L1|p.E47Q|1|0.13|ENSG00000177675|chr12:7433680-7433680|C/G|missense_variant'] 136951 10719 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.38026993586 46.546 2 -0.2374422241086583 0.06093926436015624 0.6882286265752402 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 119424 14930 VAQLKQLQAET True PC9_epitope_Rep3 1227.6823012065897 1227.6812099358601 62.563 2 -0.23753754986079198 0.06097515826885343 0.6883712251139331 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 73711 8054 MYRRWWEQFVQ True PC9_epitope_Rep6 1627.77180200067 1627.7701649037901 40.471 3 -0.2375851178764244 0.061046942099807495 0.6884423267826653 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 3599 22380 AGNQQNQALL True PC9_epitope_Rep4 1055.53597132607 1055.5348699358601 94.319 2 -0.23761720543093995 0.061046942099807495 0.6884902683219764 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant'] 112577 8505 TLELQKQIM[Oxidation]S True NCI_RA007_Epitope_Rep2 1205.63257451329 1205.6314699358602 37.725 2 -0.2376895881527921 0.061058671108643346 0.6885983524831838 ['ENST00000560591.5_1_15:67835673-67951132:+|nuORF', 'nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 11247 5348 DEEQIQEQVK True NCI_RA007_Epitope_Rep2 1244.5884603913998 1244.5873699358601 25.421 2 -0.23772918842821364 0.061058671108643346 0.6886574486712054 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'nc|ENSG00000132003|Q9H7M6|ZSWIM4', 'ZSWIM4|p.Q790Rfs*107|1|0.35|ENSG00000132003|chr19:13830447-13830447|C/-|frameshift_variant'] 100523 17999 SLASVVVGVI True PC9_epitope_Rep3 942.5749826037398 942.57388993586 74.436 2 -0.23773608999770712 0.061058671108643346 0.6886677453882172 ['ENSG00000136856|ENST00000373371|SLC2A8'] 74909 17104 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69592490379 70.941 3 -0.23781598661549072 0.061058671108643346 0.6887868897378885 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 95547 6616 RWRRRRPWLDP True NCI_RA007_Epitope_Rep2 1592.8912804000797 1592.8896449037902 30.344 3 -0.23781924737037055 0.061058671108643346 0.6887917500709111 ['RXRB|p.G327Vfs*10|1|0.2|ENSG00000204231|chr6:33196447-33196447|C/-|frameshift_variant', 'ENSG00000204231|ENST00000374680|RXRB', 'nc|ENSG00000204231|P28702-3|RXRB'] 29007 20425 FTEGELMSV True PC9_epitope_Rep5 1011.4582981689899 1011.45777496793 83.601 1 -0.23784391236471014 0.061058671108643346 0.6888285089881255 ['STK11-HMHA1|1|fusion', 'STK11|p.L282Afs*3|2|0.54|ENSG00000118046|chr19:1221314-1221315|-/C|frameshift_variant', 'ENSG00000118046|ENST00000326873|STK11', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'STK11|p.D284Efs*5|1|0.57|ENSG00000118046|chr19:1221326-1221333|CTGACCTG/-|frameshift_variant', 'STK11|p.P281Rfs*6|1|0.7|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'STK11|p.N259Kfs*28|1|0.77|ENSG00000118046|chr19:1221255-1221255|C/-|frameshift_variant', 'STK11|p.T250Rfs*37|1|0.54|ENSG00000118046|chr19:1221227-1221227|C/-|frameshift_variant', 'STK11|p.D176Tfs*111|1|0.54|ENSG00000118046|chr19:1220433-1220433|G/-|frameshift_variant', 'STK11|p.H168Lfs*119|1|0.44|ENSG00000118046|chr19:1220411-1220411|A/-|frameshift_variant', 'STK11|p.E265Gfs*19|1|0.52|ENSG00000118046|chr19:1221271-1221280|GAGAACATCG/-|frameshift_variant', 'STK11|p.K44Sfs*7|1|0.24|ENSG00000118046|chr19:1207041-1207041|C/-|frameshift_variant', 'STK11|p.D30Gfs*133|1|0.53|ENSG00000118046|chr19:1207000-1207001|-/G|frameshift_variant', 'STK11|p.D53Gfs*110|2|0.64|ENSG00000118046|chr19:1207065-1207066|-/G|frameshift_variant', 'STK11|p.Q37Pfs*123|1|0.29|ENSG00000118046|chr19:1207022-1207029|CAGCCGCG/-|frameshift_variant', 'STK11|p.R75Sfs*23|1|0.39|ENSG00000118046|chr19:1207137-1207138|-/CTCCT|frameshift_variant', 'STK11|p.V77Sfs*19|1|0.77|ENSG00000118046|chr19:1207140-1207140|C/-|frameshift_variant', 'STK11|p.D53Tfs*11|4|0.32|ENSG00000118046|chr19:1207066-1207066|G/-|frameshift_variant', 'STK11|p.E57Kfs*7|2|0.43|ENSG00000118046|chr19:1207078-1207078|G/-|frameshift_variant', 'STK11|p.Y60*|1|0.59|ENSG00000118046|chr19:1207093-1207093|C/-|frameshift_variant', 'STK11|p.A43Pfs*8|1|0.17|ENSG00000118046|chr19:1207038-1207038|G/-|frameshift_variant', 'STK11|p.K41Tfs*8|1|0.14|ENSG00000118046|chr19:1207035-1207041|AGCGGGC/-|frameshift_variant', 'STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 63847 7899 LNLAVSGR True PC9_epitope_Rep4 828.48175092524 828.48064993586 37.812 2 -0.23795952973916012 0.061093426117856085 0.6890006849511168 ['ENST00000596643.5_1_19:17622170-17622251:-|nuORF'] 130752 19066 VSYLHMLQL True PC9_epitope_Rep5 1102.58450174162 1102.5834099358601 78.367 2 -0.23796458982973626 0.061093426117856085 0.6890082154192775 ['ENSG00000183111|ENST00000333677|ARHGEF37'] 6535 8315 APTLSTSP True PC9_epitope_Rep1 772.3966838886 772.39558993586 36.818 2 -0.23801910040867896 0.06112930986619288 0.6890893121873437 ['ENSG00000106771|ENST00000374586|TMEM245', 'nc|ENSG00000106771|Q9H330-4|TMEM245'] 42966 13258 IESPPEINT True PC9_epitope_Rep5 998.4920408254201 998.49094993586 56.007 2 -0.2380999135235149 0.06116066471742108 0.6892094513526897 ['CON__P02668'] 76904 14912 NRDNVGLVL True PC9_epitope_Rep3 998.5508931142199 998.5503449679301 62.495 1 -0.2381002220369619 0.06116066471742108 0.6892099097954528 ['ENSG00000013523|ENST00000251089|ANGEL1'] 108944 15559 TADVDFSYL True H1975_Epitope_Rep3 1029.46549172441 1029.46497496793 65.265 1 -0.23814824999573359 0.06116066471742108 0.6892812593018585 ['NDUFAF7|p.N362Kfs*5|1|0.34|ENSG00000003509|chr2:37247598-37247599|-/A|frameshift_variant', 'ENSG00000003509|ENST00000002125|NDUFAF7', 'nc|ENSG00000003509|Q7L592-2|NDUFAF7'] 78730 5243 PAAAPTAEAPP True H1975_Epitope_Rep3 991.4974605590298 991.49636993586 25.252 2 -0.2381506067112464 0.06116066471742108 0.689284759438506 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 138581 7746 YIDHGDPQV True PC9_epitope_Rep1 1042.4719740871801 1042.47086993586 34.617 2 -0.23817305503523237 0.06116066471742108 0.6893180946483505 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 5623 15898 ANSSQANDCL True PC9_epitope_Rep5 1021.4134732348899 1021.4123699358599 66.142 2 -0.2381912444321575 0.06117690599555885 0.6893450994900019 ['nc|ENSG00000291164|Q6ZMU1|C3P1'] 100520 5241 SLASNRVQHSV True PC9_epitope_Rep3 1196.6261833128 1196.6245349037902 25.239 3 -0.23822413659339436 0.06117690599555885 0.6893939191993267 ['nc|ENSG00000196503|Q6T311|ARL9', 'ENSG00000196503|ENST00000640821|ARL9'] 59774 10192 LGEGASLPP True NCI_RA007_Epitope_Rep5 839.4388830537499 839.43833496793 45.836 1 -0.2382469054631098 0.061189749283004906 0.6894277033434643 ['ENST00000313401.3_1_17:30816702-30816975:+|nuORF'] 55248 10841 LADKTRRTV True PC9_epitope_Rep3 1058.61964138038 1058.61854993586 46.672 2 -0.2382499525352292 0.061189749283004906 0.6894322239143584 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant', 'LRP2|p.S830Rfs*3|1|0.26|ENSG00000081479|chr2:169259051-169259051|C/-|frameshift_variant'] 112731 10139 TLGVDFDSATP True H1975_Epitope_Rep2 1121.52406922969 1121.5229699358601 44.0 2 -0.23829897153500965 0.061189749283004906 0.689504926895424 ['nc|ENSG00000129810|Q5FBB7-4|SGO1', 'nc|ENSG00000129810|Q5FBB7-2|SGO1'] 118456 14718 TYPIKTPTF True PC9_epitope_Rep6 1066.5698972233001 1066.5688099358601 68.56 2 -0.2383131494515789 0.061189749283004906 0.6895259477898846 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 66738 19285 LSLIKDLGL True PC9_epitope_Rep6 970.60628273202 970.60518993586 86.826 2 -0.2383676924648805 0.061189749283004906 0.6896067858654544 ['ENSG00000104324|ENST00000220763|CPQ'] 92866 13796 RPFGGLIRDV True PC9_epitope_Rep4 1128.64037682496 1128.63874490379 60.963 3 -0.23846679518955213 0.061273194827299135 0.6897535434704126 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 97291 6548 SEAGLAGAPA True H1975_Epitope_Rep3 842.4133965818999 842.41284496793 30.154 1 -0.23849458800636228 0.061273194827299135 0.689794672545449 ['ENSG00000177879|ENST00000316788|AP3S1', 'COMMD10-AP3S1|1|fusion', 'COMMD10-AP3S1|2|fusion'] 84529 17627 QAQLLANL True PC9_epitope_Rep2 869.49706663621 869.49651496793 73.08 1 -0.23850603475567758 0.061273194827299135 0.6898116083664929 ['ENSG00000165644|ENST00000372538|COMTD1', 'ENST00000460899.5_1_10:76994802-76995157:-|nuORF', 'ENST00000470947.5_1_10:76993833-76995157:-|nuORF'] 64027 11511 LPAFNAKL True PC9_epitope_Rep5 872.5119884243599 872.51088993586 49.274 2 -0.23852551728239327 0.061273194827299135 0.6898404285429595 ['BRINP3|p.Q747P|1|0.29|ENSG00000162670|chr1:190098079-190098079|T/G|missense_variant'] 116555 6232 TTVKNSSLL True PC9_epitope_Rep1 961.54441075145 961.54330993586 28.784 2 -0.238538873204669 0.061273194827299135 0.689860182223799 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 114274 10927 TPPGPLASA True PC9_epitope_Rep2 809.42831837005 809.4272299358599 47.352 2 -0.23857708013809842 0.061273194827299135 0.6899166752891637 ['ENSG00000124875|ENST00000226317|CXCL6'] 32750 7013 GHASVVNTL True PC9_epitope_Rep4 896.47158016436 896.47048993586 34.222 2 -0.23859410362779768 0.061273194827299135 0.689941838831073 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 72241 12338 MHFVRSDEL True PC9_epitope_Rep1 1132.5335287979199 1132.53187490379 52.315 3 -0.23860566689874588 0.061273194827299135 0.6899589286210568 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153760401-153761015:-|nuORF'] 93079 7303 RPNDSRMLVA True PC9_epitope_Rep1 1157.59752603681 1157.59588490379 32.904 3 -0.23862731443255703 0.061287159849788185 0.6899909165741078 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 116812 19345 TVEFEECVK True PC9_epitope_Rep1 1082.4954119536999 1082.4943099358602 79.215 2 -0.23863310051653758 0.061287159849788185 0.6899994652397823 ['ENSG00000131584|ENST00000354700|ACAP3', 'ENST00000479108.5_1_1:1237366-1243195:-|nuORF'] 10906 5345 DAAEARDP True H1975_Epitope_Rep3 843.3722600459099 843.3711699358599 25.629 2 -0.2386874830027839 0.061287159849788185 0.6900797866670813 ['BEST2|p.A345D|1|0.34|ENSG00000039987|chr19:12756226-12756226|C/A|missense_variant'] 128638 8684 VPVDTGVAA True PC9_epitope_Rep6 827.4388830537498 827.43833496793 43.252 1 -0.23869587712552193 0.061287159849788185 0.6900921803487727 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 83973 9242 PVSETAVTP True H1975_Epitope_Rep3 899.4600124211499 899.4594649679301 40.541 1 -0.23870714943960292 0.06130452476969181 0.6901088218293605 ['L1CAM|p.V707A|1|0.35|ENSG00000198910|chrX:153867373-153867373|A/G|missense_variant'] 103564 11419 SPSLSPALA True NCI_RA007_Epitope_Rep4 841.4545331178899 841.4539849679301 50.845 1 -0.23886525621366095 0.06132075471698113 0.6903420238454797 ['ENSG00000089558|ENST00000264661|KCNH4'] 13658 9177 DPPSNPVAA True PC9_epitope_Rep5 866.4133965819 866.41228993586 40.245 2 -0.23888433731234252 0.06132075471698113 0.6903701409144845 ['ENSG00000056277|ENST00000370978|ZNF280C'] 114576 17332 TQDGNIYQL True PC9_epitope_Rep3 1050.4981888350198 1050.49767496793 71.842 1 -0.2389769758252392 0.061336983463430875 0.6905065668122704 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1'] 69281 15296 LTTNKWDVM True PC9_epitope_Rep6 1106.5430308524599 1106.54192993586 70.954 2 -0.2390070406373697 0.061336983463430875 0.6905508130905247 ['nc|ENSG00000239474|O60662-2|KLHL41', 'ENSG00000239474|ENST00000284669|KLHL41'] 61462 20756 LIYRKLLP True PC9_epitope_Rep3 1014.6589870112199 1014.65788993586 85.107 2 -0.2390557816897935 0.06137057245907704 0.6906225147119064 ['chr8:40114873-40125442|196|46.56|0.21|7.78|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 113192 10039 TLQALQIPAAK True H1975_Epitope_Rep3 1152.6866583110398 1152.68556993586 43.651 2 -0.2391019707592928 0.06137057245907704 0.6906904274961654 ['ENSG00000140575|ENST00000268182|IQGAP1'] 3160 16618 AGDRFSLDVL True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 69.165 2 -0.23910763479541686 0.06137057245907704 0.6906987531290593 ['nc|ENSG00000116703|P20941-2|PDC', 'ENSG00000116703|ENST00000391997|PDC', 'nc|ENSG00000116703|P20941-3|PDC'] 58341 19505 LENDIKVEI True PC9_epitope_Rep3 1071.58119018299 1071.58008993586 80.257 2 -0.2393417905604332 0.061477001609055094 0.6910424985387448 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1', 'nc|ENSG00000153956|P54289-4|CACNA2D1', 'nc|ENSG00000153956|P54289-5|CACNA2D1', 'nc|ENSG00000153956|P54289|CACNA2D1'] 44607 9438 ILQTSEVSLP True H1975_Epitope_Rep3 1085.59684024713 1085.59574993586 41.305 2 -0.23935134732513438 0.061477001609055094 0.6910565097293938 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P1213Qfs*54|1|0.19|ENSG00000155966|chrX:148987378-148987378|C/-|frameshift_variant', 'AFF2|p.T833Qfs*26|1|0.6|ENSG00000155966|chrX:148956540-148956540|C/-|frameshift_variant', 'nc|ENSG00000155966|P51816-4|AFF2'] 80975 11247 PIGWLPRQFR True NCI_RA007_Epitope_Rep2 1268.7142104715597 1268.71310993586 48.335 2 -0.23936306374622898 0.061477001609055094 0.691073685238282 ['ENST00000495741.1_1_3:69887753-69928374:+|nuORF'] 4906 21879 ALFGALFLA True PC9_epitope_Rep6 921.5323895157699 921.53128993586 97.058 2 -0.23938385813312046 0.061477001609055094 0.6911041631435602 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 62765 23916 LLLQQMLQV True PC9_epitope_Rep1 1084.6314519340401 1084.63034993586 96.796 2 -0.2394550504366197 0.061512853708156096 0.6912084568511699 ['nc|ENSG00000165304|Q14680-3|MELK', 'nc|ENSG00000165304|Q14680-4|MELK', 'nc|ENSG00000165304|Q14680-5|MELK', 'nc|ENSG00000165304|Q14680-2|MELK', 'nc|ENSG00000165304|Q14680-8|MELK', 'nc|ENSG00000165304|Q14680-7|MELK', 'nc|ENSG00000165304|Q14680-6|MELK', 'ENSG00000165304|ENST00000298048|MELK', 'MELK|p.M440Vfs*3|1|0.15|ENSG00000165304|chr9:36665490-36665491|TA/-|frameshift_variant'] 32354 17923 GFGGDFDG True PC9_epitope_Rep1 770.28713343962 770.28658496793 73.733 1 -0.23949487088739627 0.061545289788068204 0.6912667574717102 ['ENSG00000015413|ENST00000690203|DPEP1'] 79750 13733 PEALEAQV True PC9_epitope_Rep4 855.4337976733099 855.43324496793 60.722 1 -0.2395344039631346 0.061545289788068204 0.6913246127878642 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 5864 12302 APGAAFVGS True PC9_epitope_Rep3 775.38645355807 775.3859049679301 52.345 1 -0.23957673399438134 0.061545289788068204 0.6913865342477781 ['ENST00000360105.8_1_19:13207240-13207303:+|nuORF'] 27512 21657 FMPPGLQEL True PC9_epitope_Rep5 1030.5157534754599 1030.5151749679299 88.35 1 -0.23958116245488265 0.061545289788068204 0.691393010695237 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 31168 16021 GAWWFGFLI True PC9_epitope_Rep4 1095.5541875895099 1095.55308993586 69.558 2 -0.23960042988406544 0.06158113730929265 0.691421184977577 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2', 'ENSG00000084453|ENST00000683939|SLCO1A2'] 58376 14474 LENLMIGLV True H1975_Epitope_Rep3 1000.5627036678799 1000.56160993586 61.034 2 -0.23971981690684147 0.061605591095662465 0.6915956324675133 ['ESR1|p.I386N|1|0.55|ENSG00000091831|chr6:152011716-152011716|T/A|missense_variant'] 44914 7741 INQVWQNEN True H1975_Epitope_Rep3 1143.5308859456297 1143.5297899358602 34.758 2 -0.2397287433496793 0.061605591095662465 0.6916086667957831 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 142124 21343 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58977496793 90.263 1 -0.23973344592385618 0.061605591095662465 0.6916155329620514 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 69776 6589 LVFRNGDA True PC9_epitope_Rep2 890.4610154806599 890.45990993586 30.758 2 -0.23974070219294272 0.061605591095662465 0.691626127068843 ['ENSG00000183066|ENST00000328823|WBP2NL'] 128629 10249 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43778993586 44.373 2 -0.23979988306361794 0.061605591095662465 0.6917125001708416 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 119126 21617 VAIAGLMEV True PC9_epitope_Rep3 901.49428975489 901.49318993586 88.446 2 -0.23980367681096368 0.061605591095662465 0.6917180351987859 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 116597 2621 TVADKIHSV True PC9_epitope_Rep2 968.52909504048 968.52798993586 14.737 2 -0.23984497894453036 0.061605591095662465 0.6917782800009854 ['ENSG00000276023|ENST00000617516|DUSP14'] 142483 8476 YYICFDTFTEY True H1975_Epitope_Rep3 1463.5955199177897 1463.59442993586 37.588 2 -0.23990555093116156 0.061605591095662465 0.6918665846077728 ['ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'nc|ENSG00000081913|O60346-2|PHLPP1', 'ENST00000588953.1_1_18:60506025-60506217:+|nuORF'] 127304 15314 VMEKPSPLLVG True PC9_epitope_Rep1 1168.6525813014398 1168.6514899358601 63.726 2 -0.23991169500432574 0.061605591095662465 0.6918755385383888 ['ENSG00000138757|ENST00000359707|G3BP2', 'nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENST00000507701.1_1_4:76587113-76598433:-|nuORF', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000518726.5_1_5:151166169-151166277:+|nuORF'] 7464 7097 ASASIIDKKP True H1975_Epitope_Rep3 1028.5866099165999 1028.58550993586 32.268 2 -0.23993853640300414 0.061605591095662465 0.6919146484007802 ['ENST00000428388.6_1_6:32135427-32135845:+|nuORF', 'ENST00000489721.1_1_6:32135321-32135845:+|nuORF'] 28066 18878 FQSSAVMAL True PC9_epitope_Rep4 952.4688032830398 952.4682549679301 80.701 1 -0.23994160802042627 0.061605591095662465 0.6919191232578953 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 86794 20493 QLNGILLHL True PC9_epitope_Rep2 1019.6127650947899 1019.61166993586 84.257 2 -0.24002485877112092 0.06161724469422465 0.6920403506981128 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 106227 12787 STEGPSATEVP True PC9_epitope_Rep2 1073.48768372097 1073.4865899358601 54.488 2 -0.24002701656586922 0.06161724469422465 0.6920434913933325 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 126809 19887 VLPSEPLNL True PC9_epitope_Rep2 980.5542471591599 980.55314993586 81.888 2 -0.24003305329919009 0.06161724469422465 0.6920522775460868 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 97941 10858 SENLFKAEEY True H1975_Epitope_Rep2 1228.5611830143998 1228.55953490379 46.794 3 -0.2400615719465383 0.06161724469422465 0.6920937773441977 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant'] 95449 12814 RWKRYRRWMKN True NCI_RA007_Epitope_Rep1 1678.9103015924995 1678.9092099358602 53.832 2 -0.2400908241925482 0.06161724469422465 0.6921363316071062 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 10455 16406 C[Carbamidomethyl]IESLIAVFQK True NCI_RA007_Epitope_Rep1 1306.6955090220097 1306.6944099358602 67.93 2 -0.24010326775890464 0.06161724469422465 0.6921544296916026 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 38358 10639 HEIKSELL True PC9_epitope_Rep1 967.5338460677499 967.53274993586 45.815 2 -0.24024720559436058 0.06164852025066085 0.6923636012292378 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 24470 12084 FAEANTEAI True NCI_RA007_Epitope_Rep4 964.4501760134399 964.44906993586 53.48 2 -0.24025181509742166 0.06164852025066085 0.6923702945218985 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1'] 137128 16371 YASTSTVSI True PC9_epitope_Rep4 927.45492704071 927.45382993586 70.934 2 -0.24026495336001993 0.06164852025066085 0.6923893703249476 ['DLGAP1|p.D733Y|1|0.28|ENSG00000170579|chr18:3534476-3534476|C/A|missense_variant'] 64785 20249 LQAPPLTSL True PC9_epitope_Rep2 938.5436824754601 938.5431349679301 83.308 1 -0.2402702673277083 0.06164852025066085 0.6923970850662915 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 33057 12283 GILKNGLI True PC9_epitope_Rep5 826.5276384884999 826.52654993586 52.235 2 -0.24028783576973006 0.06164852025066085 0.6924225875865418 ['nc|ENSG00000062194|Q86WP2-4|GPBP1', 'nc|ENSG00000062194|Q86WP2-3|GPBP1', 'ENSG00000062194|ENST00000506184|GPBP1', 'nc|ENSG00000062194|Q86WP2-2|GPBP1'] 66313 18702 LSFSMYQSFV True PC9_epitope_Rep6 1207.55834656343 1207.55724993586 84.579 2 -0.24036773731934452 0.06166586565122555 0.6925385136461735 ['ENSG00000189077|ENST00000493111|TMEM120A', 'ENST00000465989.1_1_7:75616979-75617289:-|nuORF', 'ENST00000440632.5_1_7:75616492-75617528:-|nuORF', 'ENST00000417509.5_1_7:75616545-75617528:-|nuORF'] 66269 14602 LSFFMARVFMR True PC9_epitope_Rep5 1403.7206183749497 1403.71897490379 61.168 3 -0.24043325144693553 0.06168207024029575 0.6926334924959547 ['ENSG00000198856|ENST00000361564|OSTC', 'nc|ENSG00000198856|Q9NRP0-2|OSTC'] 105826 16110 SSLLPKEIV True PC9_epitope_Rep2 984.58554728744 984.58444993586 67.226 2 -0.24046173977601273 0.06168207024029575 0.6926747728320432 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 83264 9605 PTAEGLAAA True PC9_epitope_Rep5 799.4075829254699 799.40648993586 41.907 2 -0.24052494500125418 0.06171789800558215 0.6927663145371801 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 30765 11791 GALRRVQRAPA True H1975_Epitope_Rep1 1193.71052207345 1193.70942993586 50.346 2 -0.24061873458231745 0.06172839506172839 0.6929020398853865 ['ENST00000594806.5_1_19:59055852-59056390:+|nuORF'] 119403 15532 VAQEVWQL True PC9_epitope_Rep3 971.5076313199099 971.50652993586 64.893 2 -0.24062068598739775 0.06172839506172839 0.692904862389696 ['ENST00000526950.1_1_12:104705113-104707050:+|nuORF'] 78483 8678 NYNNQSSNF True PC9_epitope_Rep1 1086.4366512076201 1086.43607496793 38.219 1 -0.24064207497463871 0.06172839506172839 0.6929357955294391 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|541|309.39|0.0|24.88|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 108758 13856 SYSMIVNNL True NCI_RA007_Epitope_Rep3 1039.50083168731 1039.4997299358602 61.831 2 -0.24071351739294666 0.06172839506172839 0.6930390663531212 ['nc|ENSG00000116161|Q9HB71-3|CACYBP', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 12328 13780 DIQLTQSPSF True NCI_RA007_Epitope_Rep3 1134.55570371114 1134.55460993586 61.534 2 -0.24073158062766115 0.06172839506172839 0.6930651646654715 ['nc|ENSG00000241755|A0A0C4DH69|IGKV1-9'] 90004 11687 RDPSLTPSI True PC9_epitope_Rep3 984.5240096600401 984.52290993586 49.973 2 -0.24074406416345626 0.06172839506172839 0.6930831983605419 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 14093 7429 DRTTISRAL True PC9_epitope_Rep5 1031.5723568347898 1031.5712499358601 33.53 2 -0.24078897833902546 0.06172839506172839 0.6931480617234745 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 6501 18326 APTAAQVLI True PC9_epitope_Rep6 882.5174677276199 882.51636993586 83.134 2 -0.240857419875782 0.061745735459905006 0.6932468435513149 ['ENSG00000131067|ENST00000336431|GGT7'] 89180 10716 QVSLEMTLET True H1975_Epitope_Rep3 1149.55874048625 1149.5576499358601 46.295 2 -0.24087129574857308 0.06175965110047493 0.6932668619730399 ['ENST00000575041.5_1_16:11862239-11862353:-|nuORF'] 44385 8405 ILEYDTIRQE True NCI_RA007_Epitope_Rep1 1278.6455813446998 1278.64448993586 36.696 2 -0.240907525704758 0.06175965110047493 0.6933191164018592 ['ENSG00000274443|ENST00000624510|C8orf89'] 68942 9399 LTPEDGEQEL True PC9_epitope_Rep1 1129.5138984688099 1129.51280993586 41.013 2 -0.24092260790954648 0.06175965110047493 0.6933408635935695 ['ENST00000286614.10_1_8:89339558-89339669:-|nuORF'] 79116 5834 PALPPQAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 27.508 2 -0.24094358176416505 0.06175965110047493 0.693371100298177 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 24716 5442 FANGRSTGL True PC9_epitope_Rep4 921.46682913709 921.4657299358599 27.669 2 -0.24098135076693092 0.06177470618671003 0.6934255327551498 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 102123 22207 SLRNFRMIGSF True PC9_epitope_Rep6 1326.6866753943798 1326.68556993586 98.374 2 -0.2409880094003469 0.06177470618671003 0.6934351269022203 ['ENST00000366844.7_2_1:225684839-225684929:-|nuORF'] 32698 6819 GGTEPVVE True NCI_RA007_Epitope_Rep4 786.37594844402 786.3753949679301 32.852 1 -0.24098943185957475 0.06177470618671003 0.6934371763775636 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 6530 10491 APTLPGSAA True PC9_epitope_Rep1 783.41266830591 783.41156993586 45.243 2 -0.24123096048647952 0.06184633578476662 0.6937847279385 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 139234 19258 YLGPTLFL True H1975_Epitope_Rep1 922.5164050984599 922.5158549679301 80.238 1 -0.24126296169608136 0.06184633578476662 0.6938307107863377 ['ENST00000462381.1_1_7:73151257-73151715:-|nuORF', 'nc|ENSG00000106077|Q8NFV4-6|ABHD11', 'nc|ENSG00000106077|Q8NFV4-4|ABHD11', 'ENSG00000106077|ENST00000222800|ABHD11'] 48806 4579 KDQLPSLDSD True NCI_RA007_Epitope_Rep3 1116.52988288612 1116.52878993586 24.899 2 -0.2412794532441782 0.06186252771618625 0.6938544016529846 ['ENST00000586256.1_1_16:4784633-4796526:+|nuORF', 'ENSG00000166246|ENST00000299320|DNAAF8'] 137356 10527 YDPELIKEEK True H1975_Epitope_Rep3 1262.6394333350997 1262.6383299358602 45.558 2 -0.24129469376578414 0.06186252771618625 0.693876291737104 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 30277 19087 GAAAFFTAV True PC9_epitope_Rep6 853.4334037504899 853.43230993586 86.062 2 -0.24132110599115847 0.061879861791171636 0.693914219586094 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 118943 14016 VADSTFTVL True NCI_RA007_Epitope_Rep4 951.49131254943 951.4907649679301 61.192 1 -0.24146727947863167 0.06191452801951111 0.6941239353929283 ['nc|ENSG00000050748|P45984-5|MAPK9', 'nc|ENSG00000050748|P45984-3|MAPK9', 'nc|ENSG00000050748|P45984-2|MAPK9', 'nc|ENSG00000050748|P45984-4|MAPK9', 'ENSG00000050748|ENST00000452135|MAPK9'] 103230 7934 SPLFCSPEWP True NCI_RA007_Epitope_Rep1 1161.5164817514499 1161.5153899358602 34.855 2 -0.24149167233882912 0.06191452801951111 0.6941589008724823 ['nc|ENSG00000115486|P38435-2|GGCX', 'ENSG00000115486|ENST00000233838|GGCX'] 142897 17066 YYTTPIYRF True PC9_epitope_Rep6 1222.60225998074 1222.60116993586 78.209 2 -0.24154250406609523 0.061945758202778596 0.694231736135479 ['ENSG00000104957|ENST00000221554|YJU2B'] 61461 20340 LIYRKLLP True PC9_epitope_Rep2 1014.6589870112199 1014.65788993586 83.66 2 -0.2415863496285092 0.061945758202778596 0.6942945302166823 ['chr8:40114873-40125442|196|46.56|0.21|7.78|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 15615 5082 EASENVKEKK True H1975_Epitope_Rep1 1160.60371653272 1160.60260993586 24.62 2 -0.24158999938658074 0.061945758202778596 0.6942997559826791 ['ENSG00000136449|ENST00000323776|MYCBPAP', 'nc|ENSG00000136449|Q8TBZ2|MYCBPAP', 'MYCBPAP|p.E778Pfs*41|1|0.4|ENSG00000136449|chr17:50527311-50527312|-/ACCACAG|frameshift_variant', 'ENST00000470609.5_1_17:48585906-48599496:+|nuORF'] 84143 10890 PYERPPFAQI True NCI_RA007_Epitope_Rep3 1216.6240580544797 1216.62296993586 49.91 2 -0.24161164589288306 0.061945758202778596 0.6943307456296656 ['ENSG00000066056|ENST00000372476|TIE1'] 68564 6858 LTGSNHRK True NCI_RA007_Epitope_Rep1 911.4937125912701 911.49260993586 30.68 2 -0.24161354881348876 0.061945758202778596 0.694333469562331 ['ENSG00000080200|ENST00000389622|CRYBG3'] 122547 5172 VGEVIVTK True H1975_Epitope_Rep3 843.50656869075 843.50546993586 24.994 2 -0.24162321486376853 0.06195507610462539 0.694347305183395 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 47145 10103 ITVNDLPVGR True NCI_RA007_Epitope_Rep2 1082.6084079903399 1082.60730993586 43.886 2 -0.2416363756493487 0.06195507610462539 0.6943661408047095 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 66141 3961 LSENEQNTIEK True NCI_RA007_Epitope_Rep2 1303.62557417611 1303.6239149037901 20.044 3 -0.24163968639122282 0.06195507610462539 0.6943708787094185 ['ENSG00000023516|ENST00000025301|AKAP11'] 140628 22710 YRRRLWKWWKS True NCI_RA007_Epitope_Rep1 1663.9211835460299 1663.92008993586 93.125 2 -0.2416511954880561 0.06195507610462539 0.6943873477703433 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 125353 8573 VIQNNLKYP True NCI_RA007_Epitope_Rep1 1087.6025943339098 1087.6014899358602 37.349 2 -0.24172471384928276 0.06195507610462539 0.6944925032309384 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'ENST00000556686.1_1_14:52473253-52474606:-|nuORF'] 123272 15923 VGLLERLPQR True PC9_epitope_Rep5 1179.7087907379498 1179.70714490379 66.239 3 -0.24172906666089847 0.06195507610462539 0.6944987266706677 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'ENST00000589085.5_1_19:5785216-5787684:-|nuORF'] 108876 8534 TAAHGLEL True PC9_epitope_Rep4 810.42356734278 810.42246993586 40.303 2 -0.24174514889039986 0.06195507610462539 0.6945217178298926 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 36314 10139 GVEIC[Carbamidomethyl]IATPGR True NCI_RA007_Epitope_Rep1 1171.6019429903397 1171.6008499358602 43.448 2 -0.24176448204761442 0.06195507610462539 0.6945493514438595 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 100996 15965 SLFSSQNNAF True PC9_epitope_Rep2 1113.50908787189 1113.50798993586 66.663 2 -0.24181156891229139 0.06197125863533932 0.694616631330448 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 62798 24668 LLLVLLLLLED True PC9_epitope_Rep6 1265.82102652553 1265.81938490379 109.39 3 -0.2418187512488486 0.06197125863533932 0.6946268909008806 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2'] 18095 7952 EIIAKQGG True NCI_RA007_Epitope_Rep2 814.45486747106 814.45376993586 35.564 2 -0.24206141928518773 0.06208093980309943 0.6949730813447708 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 87291 13975 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.5072699358602 58.776 2 -0.24215778094914175 0.062097116787647066 0.6951103106188175 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 102480 22284 SLVFGNYLV True PC9_epitope_Rep3 1010.5436824754598 1010.54258993586 91.002 2 -0.24216782901722386 0.062097116787647066 0.6951246122951402 ['ENSG00000146409|ENST00000275227|SLC18B1', 'ENST00000460518.1_1_6:133108648-133118195:-|nuORF'] 23422 15575 EVSWPDSWPVP True PC9_epitope_Rep1 1297.59790287629 1297.5968099358602 64.732 2 -0.2423235570116883 0.06213176218532405 0.6953460750588678 ['ENST00000498157.1_1_1:109813918-109815451:+|nuORF'] 19779 9444 ELSEQLGQA True H1975_Epitope_Rep3 973.47163973401 973.4710949679301 41.328 1 -0.24237251300615448 0.06213176218532405 0.6954156228032287 ['ENSG00000261150|ENST00000615648|EPPK1'] 74933 11692 NHLDSHLLL True PC9_epitope_Rep4 1060.56654317836 1060.5654499358602 52.736 2 -0.24240701691032912 0.06214793609751593 0.695464618662759 ['DCAF4L2|p.G222Vfs*3|1|0.06|ENSG00000176566|chr8:87873307-87873308|-/A|frameshift_variant', 'DCAF4L2|p.F249Lfs*25|1|0.12|ENSG00000176566|chr8:87873228-87873228|G/-|frameshift_variant', 'DCAF4L2|p.L285Wfs*6|1|0.37|ENSG00000176566|chr8:87873119-87873119|G/-|frameshift_variant', 'ENSG00000176566|ENST00000319675|DCAF4L2', 'DCAF4L2|p.L135P|1|0.28|ENSG00000176566|chr8:87873568-87873568|A/G|missense_variant', 'DCAF4L2|p.L135M|1|0.32|ENSG00000176566|chr8:87873569-87873569|G/T|missense_variant', 'DCAF4L2|p.G148Dfs*18|1|0.14|ENSG00000176566|chr8:87873529-87873529|C/-|frameshift_variant'] 15687 5505 EAVFDDDME True H1975_Epitope_Rep3 1069.3910064548097 1069.38990993586 26.227 2 -0.24244503012331006 0.06214793609751593 0.6955185776996163 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'ENST00000472776.1_1_2:122122630-122145458:-|nuORF'] 121926 11644 VFRYNSSL True PC9_epitope_Rep3 984.50288029264 984.50178993586 49.803 2 -0.2424662971728179 0.062164108814892795 0.6955487567013303 ['nc|ENSG00000186272|P17021-3|ZNF17', 'ENST00000602050.1_1_19:57930944-57932846:+|nuORF', 'nc|ENSG00000186272|P17021|ZNF17', 'ENSG00000186272|ENST00000307658|ZNF17'] 86229 18342 QILEHLDNL True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 75.567 2 -0.24260057146572322 0.062164108814892795 0.6957391469059084 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 5827 9561 APFAAHGYGA True PC9_epitope_Rep1 960.4453654165198 960.44426993586 41.634 2 -0.24262515739072116 0.062181428676959444 0.6957739794562583 ['ENSG00000126067|ENST00000373237|PSMB2'] 31624 12254 GEFGDLNAV True NCI_RA007_Epitope_Rep4 920.4239612655999 920.4234149679301 54.132 1 -0.24263026073737504 0.06219759926131117 0.6957812086169998 ['ENSG00000080298|ENST00000617270|RFX3'] 70959 19789 LYGPSSVSF True PC9_epitope_Rep2 955.46509780159 955.46454496793 81.507 1 -0.2426402626558184 0.06219759926131117 0.6957953757703725 ['ENSG00000149257|ENST00000358171|SERPINH1'] 94876 11673 RSYWKEVLL True H1975_Epitope_Rep2 1192.6604435631998 1192.65880490379 49.973 3 -0.24267377401271215 0.06222993684677032 0.6958428321661743 ['nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7', 'ENST00000513075.1_1_17:47900608-47903534:+|nuORF', 'ENST00000503635.1_1_17:47903366-47904308:+|nuORF'] 140603 11460 YRRGQVVLY True PC9_epitope_Rep5 1152.6403768249597 1152.63874490379 49.079 3 -0.2426958925397745 0.06222993684677032 0.6958741459499881 ['ENSG00000166450|ENST00000389286|PRTG', 'PRTG|p.R972Tfs*3|1|0.55|ENSG00000166450|chr15:55627021-55627022|-/T|frameshift_variant'] 98586 10886 SFSDIPTIS True H1975_Epitope_Rep1 965.47057710485 965.46948993586 46.834 2 -0.24272883946483906 0.06222993684677032 0.6959207766736751 ['ENSG00000268629|ENST00000600991|TEX13A'] 81982 17490 PLTQTLGV True PC9_epitope_Rep2 827.4752685624699 827.47416993586 72.531 2 -0.24274660061288697 0.06222993684677032 0.6959459080298597 ['nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F', 'ENSG00000049769|ENST00000055335|PPP1R3F'] 11291 5485 DEHRLKYQCFK True NCI_RA007_Epitope_Rep2 1465.7136184182098 1465.71196490379 25.953 3 -0.2428275664083105 0.06224495448418487 0.6960604139279827 ['ENSG00000198018|ENST00000370489|ENTPD7'] 128351 7422 VPQPSGPPA True PC9_epitope_Rep5 848.4392174069199 848.43812993586 33.504 2 -0.24286977447363195 0.06224495448418487 0.6961200692437713 ['ENST00000588300.1_1_19:45920077-45926632:-|nuORF', 'nc|ENSG00000012061|P07992-4|ERCC1', 'ENST00000592905.5_1_19:45918043-45926632:-|nuORF', 'nc|ENSG00000012061|P07992-2|ERCC1', 'ENSG00000012061|ENST00000300853|ERCC1', 'nc|ENSG00000012061|P07992-3|ERCC1'] 66450 7213 LSGRCEQR True NCI_RA007_Epitope_Rep1 947.4606982108298 947.45960993586 32.048 2 -0.24288760365873596 0.06224495448418487 0.6961452606520948 ['ENST00000409470.5_2_2:85843553-85850780:+|nuORF'] 108420 18301 SYLPFTEAF True NCI_RA007_Epitope_Rep4 1073.5069626135698 1073.50637496793 79.169 1 -0.2430174109692315 0.062316512490998725 0.6963285317766453 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 69453 13594 LTYTDVPYIP True H1975_Epitope_Rep2 1180.6015912743999 1180.6004899358602 57.425 2 -0.24307676909456785 0.062316512490998725 0.6964122572685739 ['nc|ENSG00000165694|Q6ZUT3-2|FRMD7', 'ENSG00000165694|ENST00000298542|FRMD7'] 101556 3519 SLLHLRYYNYR True NCI_RA007_Epitope_Rep2 1496.7888319638 1496.7871949037901 18.338 3 -0.2431685966130824 0.062351138272927015 0.6965416820285792 ['ENST00000457379.1_1_2:50815958-50816216:-|nuORF'] 39953 10042 HPKYSDMIVA True PC9_epitope_Rep2 1159.56957995347 1159.56793490379 43.951 3 -0.24317297444688504 0.062351138272927015 0.6965478492855735 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 112479 11814 TLDLGENQL True NCI_RA007_Epitope_Rep1 1001.5029398622901 1001.50184993586 49.933 2 -0.24322031368283006 0.062363844478085885 0.6966145207965763 ['ENSG00000171236|ENST00000306390|LRG1'] 88862 16605 QVDNNNLLL True PC9_epitope_Rep2 1041.54547338061 1041.54436993586 69.112 2 -0.2432356319667352 0.062363844478085885 0.6966360878806932 ['ENSG00000126838|ENST00000261336|PZP', 'nc|ENSG00000126838|P20742-2|PZP'] 42421 14881 IEDPLIVTP True H1975_Epitope_Rep1 995.55391280599 995.55280993586 62.474 2 -0.24323745215237402 0.062363844478085885 0.6966386503539485 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 139990 4263 YQDPHSTAV True PC9_epitope_Rep6 1016.45632402304 1016.45522993586 23.408 2 -0.24324433944302778 0.062363844478085885 0.6966483459148404 ['ENSG00000146648|ENST00000275493|EGFR'] 18157 5933 EIKHWRKMLWR True NCI_RA007_Epitope_Rep1 1581.87145647229 1581.86925987172 27.125 4 -0.24325345523439976 0.062363844478085885 0.6966611776015592 ['ENSG00000141371|ENST00000269127|CHCT1'] 103226 7066 SPLATSTTA True PC9_epitope_Rep5 847.42871229287 847.42760993586 32.147 2 -0.24328184325848304 0.062378851372556256 0.6967011299366717 ['ENSG00000127423|ENST00000374298|AUNIP', 'nc|ENSG00000127423|Q9H7T9-2|AUNIP'] 58949 8738 LETRRPSYL True PC9_epitope_Rep4 1133.61930702721 1133.61820993586 41.116 2 -0.24338876440768145 0.062378851372556256 0.696851504267255 ['ENSG00000154319|ENST00000284486|FAM167A'] 102122 23387 SLRNFRMIGSF True PC9_epitope_Rep4 1326.6866753943798 1326.68556993586 98.217 2 -0.24340409220568135 0.062378851372556256 0.6968730480417807 ['ENST00000366844.7_2_1:225684839-225684929:-|nuORF'] 60286 4136 LGSALRPSTSR True NCI_RA007_Epitope_Rep1 1143.6360197205101 1143.6343649037901 20.167 3 -0.24347997054337495 0.06239616023629315 0.6969796487512842 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 67238 12511 LSRNLYVVL True PC9_epitope_Rep2 1075.6389798426299 1075.6378899358601 53.432 2 -0.24351147014727645 0.06242847122235759 0.6970238782859551 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 9174 20656 AVLIDFSPLT True PC9_epitope_Rep1 1074.5961119711399 1074.5950099358602 84.275 2 -0.24354523935984312 0.06242847122235759 0.6970712790656057 ['ENST00000429172.5_2_2:171627798-171634191:+|nuORF'] 57487 15984 LEDGKMILAS True H1975_Epitope_Rep1 1075.55834656343 1075.5577749679298 66.814 1 -0.24354870740677576 0.06242847122235759 0.6970761461415074 ['ENST00000473607.5_1_3:125854214-125879740:-|nuORF', 'nc|ENSG00000144908|O75891-4|ALDH1L1', 'ALDH1L1|p.G655Afs*5|1|0.4|ENSG00000144908|chr3:126118023-126118023|C/-|frameshift_variant', 'nc|ENSG00000144908|O75891-2|ALDH1L1', 'ENSG00000144908|ENST00000393434|ALDH1L1', 'nc|ENSG00000144908|O75891-3|ALDH1L1'] 9412 23320 AVTGILVQL True PC9_epitope_Rep1 912.5644179200399 912.56332993586 94.491 2 -0.2435529932038332 0.06242847122235759 0.6970821606177047 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000487805.6_1_3:49750857-49758735:+|nuORF'] 46505 21306 ISWAIYYL True PC9_epitope_Rep4 1027.53786881903 1027.53676993586 90.121 2 -0.24356992581996975 0.06246423627134287 0.6971059204794169 ['ENSG00000157103|ENST00000287766|SLC6A1'] 127226 2624 VLWEARRNLK True NCI_RA007_Epitope_Rep5 1283.7462388758297 1283.7445949037901 14.78 3 -0.2436110364656197 0.06249538575119971 0.6971635901359801 ['ENST00000359653.4_1_10:126631759-126631801:+|nuORF'] 59951 17764 LGGVAVSLS True PC9_epitope_Rep2 801.4596184983301 801.4590749679301 73.617 1 -0.24362255874545483 0.06249538575119971 0.6971797492135882 ['nc|ENSG00000167077|Q5TIA1-5|MEI1', 'nc|ENSG00000167077|Q5TIA1-3|MEI1', 'nc|ENSG00000167077|Q5TIA1-2|MEI1', 'ENSG00000167077|ENST00000401548|MEI1', 'nc|ENSG00000167077|Q5TIA1-7|MEI1', 'SREBF2-MEI1|1|fusion'] 66907 10920 LSNNASIVL True NCI_RA007_Epitope_Rep3 929.51819600361 929.51708993586 50.033 2 -0.24362441582370062 0.06249538575119971 0.6971823534424517 ['ENST00000525268.2_1_11:77612536-77632479:-|nuORF'] 70669 16868 LWHIWRERN True PC9_epitope_Rep6 1308.68397297244 1308.68233490379 77.401 3 -0.2436291874046926 0.06249538575119971 0.6971890445310228 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 40838 8661 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48724993586 38.273 2 -0.2436497740892394 0.06249538575119971 0.6972179091318265 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4'] 47524 7644 IVSEKSRYSL True H1975_Epitope_Rep1 1180.6451874218799 1180.6440899358602 34.382 2 -0.24371140790421308 0.06251153519619061 0.6973042902619848 ['ENSG00000163686|ENST00000478253|ABHD6'] 36232 4895 GVDDKFYSK True NCI_RA007_Epitope_Rep4 1057.50802524273 1057.5069299358602 25.28 2 -0.24371408358925573 0.06251153519619061 0.6973080390823311 ['ENST00000589308.1_1_19:36606815-36612715:+|nuORF', 'nc|ENSG00000105254|Q99426-2|TBCB', 'ENST00000392178.8_1_19:36606435-36612715:+|nuORF', 'ENSG00000105254|ENST00000221855|TBCB', 'ENST00000481742.1_1_19:36606435-36607215:+|nuORF'] 83724 12208 PVGNPEIL True H1975_Epitope_Rep2 837.45961849833 837.45852993586 52.04 2 -0.24374172905381333 0.06252537555826228 0.6973467664046709 ['nc|ENSG00000132530|Q6GPH4-6|XAF1', 'ENST00000575369.5_1_17:6662992-6674357:+|nuORF', 'nc|ENSG00000132530|Q6GPH4-2|XAF1', 'nc|ENSG00000132530|Q6GPH4-7|XAF1', 'ENSG00000132530|ENST00000361842|XAF1'] 104651 12991 SQTFEHPLV True PC9_epitope_Rep5 1056.52400966004 1056.52290993586 54.979 2 -0.24374502500428277 0.06252537555826228 0.697351382841047 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF'] 69233 11676 LTSSSPIPR True PC9_epitope_Rep2 956.52909504048 956.52798993586 50.243 2 -0.2437783628224455 0.06252537555826228 0.6973980685099072 ['nc|ENSG00000165806|P55210-2|CASP7'] 18719 19897 ELANYQVL True PC9_epitope_Rep3 948.4916469025999 948.49054993586 81.775 2 -0.2437791794330815 0.06252537555826228 0.6973992118806867 ['SLC8A1|p.H824Tfs*8|1|0.29|ENSG00000183023|chr2:40139476-40139476|G/-|frameshift_variant', 'nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1'] 136947 10444 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.3808149679301 45.493 1 -0.24390623816946963 0.06254267628767048 0.6975769982675403 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 134070 9215 VYKKYPNVF True PC9_epitope_Rep4 1156.6280808057597 1156.62643490379 43.044 3 -0.24391206187980377 0.0625576674663222 0.6975851416519034 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 46115 12484 ISINFWVP True H1975_Epitope_Rep2 974.5225531080599 974.52144993586 53.111 2 -0.24394306058358237 0.0625576674663222 0.6976284796415275 ['ENSG00000156886|ENST00000389202|ITGAD'] 21977 9302 ESERRWVLTGT True H1975_Epitope_Rep2 1332.6786128084798 1332.6769649037901 40.738 3 -0.24395901265322137 0.0625576674663222 0.6976507763298608 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 69777 6770 LVFRNGDA True PC9_epitope_Rep2 890.4610154806599 890.45990993586 31.446 2 -0.2440241162910923 0.0625726569852195 0.6977417368194567 ['ENSG00000183066|ENST00000328823|WBP2NL'] 108494 14561 SYMGHFDLL True NCI_RA007_Epitope_Rep5 1081.49026700361 1081.4891699358602 62.681 2 -0.24403072759281497 0.0625726569852195 0.6977509705892401 ['ENSG00000169976|ENST00000367569|SF3B5'] 90677 4303 REQELMRAA True NCI_RA007_Epitope_Rep4 1102.5553268716599 1102.5542299358601 22.896 2 -0.2440651210646974 0.0625726569852195 0.6977989969030017 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 15996 11912 EDRSFRTTRNR True NCI_RA007_Epitope_Rep2 1436.7232715851198 1436.72161490379 50.938 3 -0.24414399748701607 0.06258879970476981 0.6979090760972 ['ENST00000362000.9_1_7:65540928-65547388:+|nuORF'] 137320 9904 YDGHLPIEIK True NCI_RA007_Epitope_Rep2 1183.62372370131 1183.62208490379 43.152 3 -0.2441493861362837 0.06258879970476981 0.697916593289473 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 24042 10470 EYNNNFHVL True NCI_RA007_Epitope_Rep5 1148.5250722892001 1148.5239699358601 46.904 2 -0.24420377652714495 0.06260494123290956 0.6979924455832576 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 109394 6367 TDAVEYARKR True NCI_RA007_Epitope_Rep1 1207.6309343400699 1207.62928490379 28.793 3 -0.24425018853639632 0.06260494123290956 0.6980571388634046 ['ENSG00000179097|ENST00000319595|HTR1F'] 100639 12096 SLDFFHSDRK True H1975_Epitope_Rep3 1250.60438523906 1250.6032899358602 51.692 2 -0.244266416795581 0.0626222369829145 0.6980797522457437 ['ENST00000590311.5_1_17:67108322-67108499:-|nuORF'] 56099 7015 LATTVRPV True NCI_RA007_Epitope_Rep5 855.5178020807899 855.51670993586 33.663 2 -0.24437855106188794 0.06265104695138825 0.698235906991242 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'XPO6|p.S683L|1|0.11|ENSG00000169180|chr16:28113007-28113007|G/A|missense_variant'] 52791 5720 KNLQTVNVDEN True PC9_epitope_Rep4 1272.6309939097198 1272.62988993586 28.823 2 -0.2444140003548466 0.06265104695138825 0.6982852364674417 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 12161 5827 DIEKLRKREQK True NCI_RA007_Epitope_Rep1 1441.83651043221 1441.83487490379 26.719 3 -0.2444605750044035 0.06265104695138825 0.6983500211084332 ['ENSG00000103549|ENST00000324685|RNF40', 'ENST00000566703.1_1_16:30776326-30777900:+|nuORF', 'nc|ENSG00000103549|O75150-3|RNF40', 'ENST00000493683.5_1_16:30773821-30780773:+|nuORF', 'nc|ENSG00000103549|O75150-4|RNF40'] 108282 7460 SYIGGHEGL True NCI_RA007_Epitope_Rep4 931.43994568291 931.43884993586 35.34 2 -0.24449118217355473 0.06265104695138825 0.6983925789592741 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 65093 6355 LQLSPHQIQA True NCI_RA007_Epitope_Rep2 1133.6193070272102 1133.61820993586 29.325 2 -0.24450796399129676 0.06265104695138825 0.6984159078291564 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 109671 6988 TEASEDDMG True H1975_Epitope_Rep2 953.3284061982499 953.32730993586 31.802 2 -0.24452187661464128 0.06265104695138825 0.6984352452167234 ['ENSG00000132563|ENST00000378339|REEP2', 'nc|ENSG00000132563|Q9BRK0|REEP2', 'ENST00000507635.5_1_5:137780026-137781437:+|nuORF'] 13477 5902 DNIQGITK True PC9_epitope_Rep3 887.47124581119 887.47014993586 27.764 2 -0.24452834277020258 0.06265104695138825 0.698444231728797 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000275663|ENST00000611444|H4C7'] 103968 10577 SQANVVVKI True PC9_epitope_Rep2 956.5654805492 956.56438993586 46.002 2 -0.2445930348540024 0.06268678744050474 0.6985341076680109 ['ENSG00000100219|ENST00000344347|XBP1'] 31091 21462 GAVDPLLAL True PC9_epitope_Rep4 867.50656869075 867.5060249679301 90.743 1 -0.24466003875882336 0.06269829558031433 0.6986271348818772 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 133351 17150 VVVEIIKAV True PC9_epitope_Rep4 968.6270181765998 968.62592993586 73.974 2 -0.24472188454661853 0.06269829558031433 0.6987129460995345 ['ENSG00000066654|ENST00000396083|THUMPD1'] 11412 11716 DETLLSAIA True H1975_Epitope_Rep1 931.48622716899 931.4856749679301 50.057 1 -0.24473141929508632 0.06269829558031433 0.6987261709395917 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF'] 12640 6817 DLCNNPMTKEP True H1975_Epitope_Rep1 1260.54785853272 1260.54676993586 31.264 2 -0.24473291483538018 0.06269829558031433 0.6987282451638724 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 15693 9026 EAVQEITEY True H1975_Epitope_Rep2 1080.49752012868 1080.49642993586 39.67 2 -0.24475309781363963 0.06269829558031433 0.6987562347508447 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 140017 5459 YQDTPKQI True PC9_epitope_Rep4 991.4974605590298 991.49636993586 27.738 2 -0.24480179645179756 0.06269829558031433 0.6988237467251154 ['ENSG00000048162|ENST00000614830|NOP16'] 114238 16795 TPMPPISSV True PC9_epitope_Rep4 927.47355431031 927.47244993586 72.573 2 -0.24491338611546573 0.06271558482282848 0.6989783239656643 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 125417 15271 VITAMVISSI True PC9_epitope_Rep4 1032.58891841572 1032.58782993586 66.67 2 -0.24493910915261685 0.06274900398406374 0.6990139322174629 ['ENSG00000136052|ENST00000258538|SLC41A2'] 99696 5936 SIHENFSQA True PC9_epitope_Rep4 1031.4672230599099 1031.4661299358602 29.759 2 -0.24495471767470056 0.06274900398406374 0.6990355346171486 ['ENSG00000125633|ENST00000376300|CCDC93'] 79562 7245 PDERIKMER True NCI_RA007_Epitope_Rep1 1172.59719168364 1172.5960899358602 32.173 2 -0.24499621660304707 0.06274900398406374 0.6990929535714239 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 118359 13347 TYNKHINISF True PC9_epitope_Rep5 1235.62987171091 1235.62822490379 56.354 3 -0.24510137606246443 0.0628193068850403 0.6992383501180691 ['ENSG00000173451|ENST00000308086|THAP2'] 133026 11196 VVPHLHGQV True PC9_epitope_Rep3 984.5504991914 984.54940993586 48.07 2 -0.24515762007763248 0.0628193068850403 0.6993160531912382 ['ENST00000303277.6_1_4:1718988-1719900:-|nuORF'] 15463 7131 EALNKFVDP True H1975_Epitope_Rep2 1031.5287606873098 1031.52766993586 32.362 2 -0.24515826191115178 0.0628193068850403 0.6993169396594117 ['ENSG00000149654|ENST00000537909|CDH22'] 66833 15380 LSMKLSICFMK True PC9_epitope_Rep3 1299.67530797531 1299.67366490379 64.315 3 -0.24519275886173944 0.0628354327659025 0.6993645769080906 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 91215 12838 RGDLPFVVPR True PC9_epitope_Rep6 1154.6560268890998 1154.65492993586 60.892 2 -0.24519872870454218 0.0628354327659025 0.6993728191002917 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 11602 21577 DGFLSELTQQL True NCI_RA007_Epitope_Rep1 1249.6190322436898 1249.6184749679298 88.296 1 -0.2452071342988042 0.0628527166094943 0.6993844233663401 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 142239 16968 YWMHVQNTF True PC9_epitope_Rep6 1224.53861417836 1224.53750993586 77.813 2 -0.24531506471762426 0.0629045643153527 0.699533340856452 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 138179 17817 YGNSLISTV True PC9_epitope_Rep1 952.4865615221601 952.48546993586 73.328 2 -0.2453233494235713 0.0629045643153527 0.6995447652160128 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 138200 10034 YGRADIAV True PC9_epitope_Rep2 863.4501164437899 863.44900993586 43.921 2 -0.24533696233268176 0.0629045643153527 0.699563534995908 ['GRIA3|p.S817Rfs*3|1|0.6|ENSG00000125675|chrX:123482810-123482810|C/-|frameshift_variant', 'nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 106804 7034 [Acetylation]-SVAGGEIR True H1975_Epitope_Rep3 829.42938131551 829.42883496793 32.021 1 -0.24536848713287232 0.06292068526748668 0.6996069924905101 ['ENST00000565758.1_1_16:30441199-30441310:-|nuORF', 'ENSG00000179958|ENST00000319285|DCTPP1'] 128660 10324 VPVKAKNV True PC9_epitope_Rep2 853.53853752537 853.53744993586 45.039 2 -0.24540122930464736 0.06292068526748668 0.6996521139698457 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 132485 15830 VVDGNFEEV True PC9_epitope_Rep5 1006.46074069714 1006.46017496793 65.881 1 -0.24544848110417872 0.0629552453484298 0.6997172054839158 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 102380 20203 SLTFSPNWQP True PC9_epitope_Rep5 1175.56112344475 1175.56002993586 82.759 2 -0.24546086838326167 0.0629552453484298 0.6997342645545577 ['ENST00000557990.1_3_15:91459481-91459855:+|nuORF'] 101915 8920 SLPTSQSYCPP True H1975_Epitope_Rep2 1178.52777471114 1178.5266699358601 39.272 2 -0.2454763726230411 0.06297252443297068 0.699755613220618 ['nc|ENSG00000135903|P23760|PAX3', 'nc|ENSG00000135903|P23760-6|PAX3', 'ENSG00000135903|ENST00000392070|PAX3', 'nc|ENSG00000135903|P23760-8|PAX3'] 79109 4853 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 24.037 2 -0.24553359912543687 0.06302551998819884 0.6998343836495706 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 130378 23535 VSLAQVTYV True PC9_epitope_Rep5 978.53859709502 978.53750993586 95.512 2 -0.24558434728521567 0.06302551998819884 0.699904200039532 ['ALDH1L1|p.D460Y|1|0.11|ENSG00000144908|chr3:126135629-126135629|C/A|missense_variant'] 27236 10685 FLPETEPP True PC9_epitope_Rep1 928.4541987647199 928.45310993586 45.99 2 -0.24575024982725 0.063110734171614 0.7001321981878591 ['ENSG00000110876|ENST00000550948|SELPLG', 'nc|ENSG00000110876|Q14242-2|SELPLG'] 71354 15891 LYRKMRLR True PC9_epitope_Rep3 1134.6808021682998 1134.67915490379 66.273 3 -0.24587267053559594 0.063110734171614 0.7003002035970274 ['ENSG00000197943|ENST00000564138|PLCG2', 'ENST00000567980.5_1_16:81819579-81955027:+|nuORF'] 33914 20547 GLQSLIGDI True PC9_epitope_Rep5 914.50729696674 914.50618993586 84.078 2 -0.24587901157908224 0.063110734171614 0.7003089003476629 ['nc|ENSG00000088298|Q9BV94-2|EDEM2', 'ENSG00000088298|ENST00000374492|EDEM2'] 78859 17454 PAEPAFLA True PC9_epitope_Rep6 814.4225047136199 814.4219549679301 79.757 1 -0.24588983335480333 0.063110734171614 0.7003237411906515 ['ENSG00000163807|ENST00000296121|KIAA1143'] 92562 18911 RMKYYELI True PC9_epitope_Rep4 1114.58450174162 1114.5839749679299 80.827 1 -0.24589055955796843 0.063110734171614 0.7003247370403427 ['ENSG00000099381|ENST00000262519|SETD1A'] 19140 17206 ELGSALAP True H1975_Epitope_Rep3 756.40176926904 756.40122496793 71.824 1 -0.245894852266301 0.063110734171614 0.7003306235307323 ['ENST00000490187.1_1_20:25205760-25206148:+|nuORF'] 136445 15815 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.53367496793 66.019 1 -0.2459130222841977 0.06312218862915714 0.7003555369299016 ['ENSG00000116221|ENST00000360840|MRPL37'] 73436 16700 MVADKFTEL True PC9_epitope_Rep1 1052.52123277872 1052.52012993586 69.065 2 -0.2459147049146466 0.06312218862915714 0.7003578438070239 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 120079 3570 VDVDGNPHPTK True NCI_RA007_Epitope_Rep2 1177.57275075761 1177.57111490379 18.537 3 -0.24592440423620526 0.06312218862915714 0.7003711407880675 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant'] 102983 16383 SPFGSITSA True PC9_epitope_Rep2 865.4181476091701 865.41704993586 68.264 2 -0.24596226873966032 0.06312218862915714 0.7004230379459698 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 42323 6860 IDYVPYDDP True H1975_Epitope_Rep1 1095.4760564081098 1095.4749499358602 31.431 2 -0.2459935189801681 0.06312218862915714 0.7004658552034119 ['ENSG00000198734|ENST00000367797|F5'] 135823 16630 WNPRRWWRWCW True PC9_epitope_Rep2 1730.8153385785 1730.81368490379 69.212 3 -0.24605459486818124 0.06312218862915714 0.70054950031665 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 124923 7035 VHRSPRPP True H1975_Epitope_Rep3 944.5304324531598 944.52932993586 32.025 2 -0.24612734485564952 0.06315789473684211 0.7006490687482084 ['ENST00000425690.7_1_19:45165089-45165437:+|nuORF'] 63012 7852 LLPRPPGV True NCI_RA007_Epitope_Rep1 847.5279728416699 847.52686993586 34.532 2 -0.24617357883359936 0.06316235693090293 0.7007123098473605 ['ENST00000592120.5_2_16:4897773-4898130:+|nuORF'] 60278 9750 LGRRHQSTLQE True PC9_epitope_Rep3 1323.7007452353903 1323.6991049037902 42.457 3 -0.2461898566835899 0.06316235693090293 0.7007345687423336 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 5051 13617 ALLADIRKG True PC9_epitope_Rep1 955.58146496651 955.58036993586 57.233 2 -0.24619198491631178 0.06316235693090293 0.7007374787017984 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 67541 4613 LSTNKATIA True NCI_RA007_Epitope_Rep3 917.5181960036099 917.51708993586 25.06 2 -0.24620208989039927 0.06316235693090293 0.7007512945415104 ['ENST00000538862.6_1_12:6960604-6960844:-|nuORF'] 74829 7775 NHEDKIRVVL True PC9_epitope_Rep4 1221.6829699129298 1221.68131490379 37.303 3 -0.24622054820199252 0.06316235693090293 0.700776527836146 ['ENSG00000110047|ENST00000320631|EHD1'] 62939 23312 LLPECFYSF True PC9_epitope_Rep5 1117.5154191222898 1117.5143299358601 94.649 2 -0.24623655260105884 0.06316235693090293 0.7007984028764183 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1', 'ENST00000522920.1_1_8:95655542-95658518:+|nuORF'] 138173 4877 YGMRLGREVR True NCI_RA007_Epitope_Rep5 1235.6557096192698 1235.65405490379 25.453 3 -0.24624725617005552 0.06316235693090293 0.7008130307745957 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 85056 6778 QEIQCEKAQAK True H1975_Epitope_Rep1 1274.6288857347397 1274.6277899358602 31.115 2 -0.2462526111869093 0.06316235693090293 0.7008203485720822 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 103707 6504 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48159496793 29.99 1 -0.24627656205536813 0.06316235693090293 0.700853073537089 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 24585 17477 FAIDPHLLL True NCI_RA007_Epitope_Rep1 1037.59096702105 1037.5898699358602 72.115 2 -0.24631321315531352 0.06316235693090293 0.7009031366150158 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 82298 4137 PPHPPPPPP True NCI_RA007_Epitope_Rep3 931.49158733295 931.49048993586 22.846 2 -0.24633731246171583 0.06316235693090293 0.7009360450639831 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 122516 11912 VGEQAQAAP True H1975_Epitope_Rep2 869.4242956187697 869.42318993586 50.899 2 -0.24633847860863137 0.06316235693090293 0.7009376372839163 ['ENST00000461072.5_1_20:62701832-62703375:+|nuORF'] 75058 12207 NHTIYINNL True PC9_epitope_Rep6 1100.5614577979202 1100.56036993586 58.32 2 -0.2463712808177808 0.06317729450792481 0.7009824170205861 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 77238 12774 NRWWRWRRARW True NCI_RA007_Epitope_Rep1 1727.9134128269898 1727.91230993586 53.676 2 -0.24640453862008097 0.06317729450792481 0.7010278042079774 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 85988 13744 QHLLDTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 57.711 2 -0.24641870360174456 0.06317729450792481 0.7010471308404191 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 102980 20703 SPFFPLVSA True PC9_epitope_Rep6 963.5065686907499 963.50546993586 92.396 2 -0.24648529070300818 0.06321065919687448 0.7011379465217914 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 137192 13535 YAYDGKDYLA True PC9_epitope_Rep5 1177.5291546101298 1177.52804993586 57.084 2 -0.2464933561477723 0.06321065919687448 0.7011489427175491 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 84062 16694 PVYKNLQLF True PC9_epitope_Rep6 1120.6280808057597 1120.6269899358601 76.685 2 -0.24649950827561726 0.06321065919687448 0.7011573297762088 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 3075 14564 AFVYLRQPY True PC9_epitope_Rep5 1155.6076797143498 1155.60604490379 61.019 3 -0.246590309393864 0.06324635117204777 0.7012810590101849 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 114812 16233 TQLIDKLEER True PC9_epitope_Rep2 1243.67721582615 1243.67610993586 67.685 2 -0.24668444705050122 0.0632820418317516 0.7014092203889742 ['ENSG00000149679|ENST00000279101|CABLES2'] 80597 12647 PGQLKILTG True PC9_epitope_Rep1 925.55966689277 925.55856993586 53.516 2 -0.24676913557367586 0.06331539765607724 0.7015244181953666 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 17047 19944 EGFLQASL True PC9_epitope_Rep5 863.4388830537499 863.43778993586 81.77 2 -0.24683981463005567 0.06331539765607724 0.7016204877237077 ['ARHGEF7|p.S445Qfs*17|1|0.08|ENSG00000102606|chr13:111274773-111274774|-/CCTTCAAAAA|frameshift_variant', 'nc|ENSG00000102606|Q14155-2|ARHGEF7', 'nc|ENSG00000102606|Q14155-3|ARHGEF7', 'nc|ENSG00000102606|Q14155|ARHGEF7', 'ENSG00000102606|ENST00000646102|ARHGEF7', 'ENST00000422836.2_1_13:111767873-111768762:+|nuORF', 'nc|ENSG00000102606|Q14155-5|ARHGEF7'] 110917 8849 TGVVESEEMMP True H1975_Epitope_Rep3 1207.51007604167 1207.50896993586 39.043 2 -0.24688413690151156 0.06331539765607724 0.7016806988501318 ['ENSG00000221843|ENST00000447166|C2orf16'] 98594 8186 SFSLRGRPP True H1975_Epitope_Rep2 1015.5563128478299 1015.55520993586 36.438 2 -0.24690441173504632 0.06333149069467478 0.701708233350927 ['ENST00000553852.1_1_14:35515838-35522488:+|nuORF'] 27894 11439 FQDRPVSSL True PC9_epitope_Rep3 1047.53490869691 1047.53380993586 49.0 2 -0.24694280979031397 0.06333149069467478 0.7017603656319161 ['ENSG00000130147|ENST00000392011|SH3BP4'] 101649 14969 SLLSNWDY True H1975_Epitope_Rep2 996.4552613938799 996.45416993586 62.73 2 -0.24698858440400692 0.0633671758397671 0.701822487805943 ['ENST00000548257.1_1_12:48745482-48835873:+|nuORF', 'ENST00000524168.1_1_8:23225784-23261561:-|nuORF'] 93505 3201 RQKRLQEAL True NCI_RA007_Epitope_Rep3 1140.6727395823998 1140.67108490379 17.883 3 -0.24709967034360805 0.06340285966981132 0.7019731326244144 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'CALD1|p.T726Lfs*13|1|0.67|ENSG00000122786|chr7:134960083-134960083|C/-|frameshift_variant', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1'] 46214 9620 ISNEFKVEV True PC9_epitope_Rep6 1063.5549754351498 1063.5538699358601 47.338 2 -0.24713244162663273 0.06343737332792866 0.7020175434648797 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 27416 14778 FLWREQFYRYY True H1975_Epitope_Rep3 1669.8041476747699 1669.8030499358601 62.222 2 -0.24713288983721454 0.06343737332792866 0.7020181507722094 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 74396 14200 NESGELVAI True PC9_epitope_Rep3 930.4658260775799 930.46472993586 59.707 2 -0.24718685976532995 0.0634707150358347 0.7020912587986825 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 4217 7536 AIAVAVNQ True NCI_RA007_Epitope_Rep5 784.4443027873601 784.4437549679301 35.673 1 -0.24723137361970765 0.0634707150358347 0.7021515291380586 ['UROC1|p.I526V|1|0.57|ENSG00000159650|chr3:126492450-126492450|T/C|missense_variant'] 96888 10088 SATPPASLP True NCI_RA007_Epitope_Rep5 839.43888305375 839.43778993586 45.438 2 -0.24723140296434218 0.0634707150358347 0.7021515688612885 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'BRAF|p.G397S|1|0.08|ENSG00000157764|chr7:140783146-140783146|C/T|missense_variant'] 20754 16733 EQFHQFLEA True PC9_epitope_Rep1 1147.52982331647 1147.5287299358602 69.191 2 -0.24727988191475647 0.06348329096201319 0.7022171785951793 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF', 'DUS3L|p.E258Kfs*28|1|0.17|ENSG00000141994|chr19:5789335-5789335|C/-|frameshift_variant'] 23297 9965 EVQEQWPCLP True H1975_Epitope_Rep2 1227.5594091925898 1227.55830993586 43.322 2 -0.2473126230027875 0.06348329096201319 0.7022614720421737 ['nc|ENSG00000117411|O60909-3|B4GALT2'] 101391 12067 SLKKEFESV True PC9_epitope_Rep6 1065.57062549929 1065.5695299358601 57.732 2 -0.24736028452166312 0.06348329096201319 0.7023259256668618 ['nc|ENSG00000101190|Q9UL49-1|TCFL5', 'ENSG00000101190|ENST00000335351|TCFL5', 'nc|ENSG00000101190|Q9UL49-2|TCFL5'] 99962 16202 SINSILDYI True H1975_Epitope_Rep2 1036.54407639828 1036.54357496793 67.53 1 -0.247467940570958 0.06348329096201319 0.7024714031420857 ['ENST00000558545.1_1_15:49431640-49447775:-|nuORF', 'ENSG00000166200|ENST00000388901|COPS2', 'nc|ENSG00000166200|P61201-2|COPS2'] 118697 13302 TYTDVTPRQF True PC9_epitope_Rep5 1226.59315184902 1226.59150490379 56.177 3 -0.24748612321782792 0.06348329096201319 0.7024959589130382 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF', 'STARD7|p.G169R|1|0.36|ENSG00000084090|chr2:96195002-96195002|C/G|missense_variant'] 13206 13511 DLSFTEEGY True H1975_Epitope_Rep3 1059.43967089939 1059.4385699358602 57.248 2 -0.2474948567127995 0.06350054344822505 0.7025077520348835 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'GRIN2A|p.F1234Sfs*51|1|0.28|ENSG00000183454|chr16:9763845-9763845|G/-|frameshift_variant', 'ENSG00000183454|ENST00000330684|GRIN2A'] 103312 15281 SPLSSPLAQA True PC9_epitope_Rep4 969.5131106231698 969.51200993586 66.707 2 -0.2475474144727059 0.0635177952987989 0.7025787017469658 ['ENST00000394540.3_1_11:64010007-64010954:+|nuORF', 'ENST00000541388.1_1_11:64010007-64011498:+|nuORF'] 93418 12147 RQEVEMLVK True PC9_epitope_Rep1 1130.6117791186198 1130.61013490379 51.585 3 -0.24758040253294106 0.06353387613749402 0.7026232154255546 ['UBN2|p.A180V|1|0.12|ENSG00000157741|chr7:139237075-139237075|C/T|missense_variant'] 53543 5292 KRNARQMRKQP True PC9_epitope_Rep4 1411.79426878075 1411.79263490379 27.061 3 -0.24758062822424698 0.06353387613749402 0.7026235199224062 ['ENST00000570267.2_1_16:89283339-89283555:-|nuORF'] 32509 9297 GGETLDQVKMR True H1975_Epitope_Rep1 1232.6183210510399 1232.61722993586 40.669 2 -0.24765898522331245 0.06354761466200037 0.7027291975977904 ['ENSG00000078237|ENST00000179259|TIGAR'] 47171 11532 ITWTLDDDP True PC9_epitope_Rep1 1074.48695544498 1074.4858499358602 49.237 2 -0.2476828734551707 0.06354761466200037 0.7027613992440185 ['DSCAM|p.N748Kfs*38|1|0.29|ENSG00000171587|chr21:40276209-40276210|-/T|frameshift_variant', 'DSCAM|p.V784Lfs*6|1|0.32|ENSG00000171587|chr21:40276103-40276103|C/-|frameshift_variant', 'nc|ENSG00000171587|O60469-2|DSCAM', 'DSCAM|p.D1921Afs*63|1|0.05|ENSG00000171587|chr21:40013310-40013311|GT/-|frameshift_variant', 'ENSG00000171587|ENST00000400454|DSCAM'] 38408 7371 HEMVVYEA True NCI_RA007_Epitope_Rep4 976.4324177743199 976.43132993586 34.993 2 -0.2477250331471762 0.06354761466200037 0.702818213201187 ['ENSG00000181789|ENST00000314797|COPG1'] 82601 6852 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.4074249679301 31.274 1 -0.2477882192603413 0.06354761466200037 0.7029033195035568 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 23660 11624 EYAKIEETM True PC9_epitope_Rep5 1112.5059766374 1112.5048699358601 49.707 2 -0.24784272450618489 0.06356252187206454 0.7029766923765515 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 70543 19267 LVYMEIESL True PC9_epitope_Rep3 1095.55219855383 1095.55110993586 79.333 2 -0.2478817876038531 0.06356252187206454 0.703029254263848 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23', 'MED23|p.H779Pfs*26|1|0.22|ENSG00000112282|chr6:131598646-131598647|-/G|frameshift_variant'] 108524 17480 SYMLVNENRF True PC9_epitope_Rep5 1271.5968573304701 1271.59522490379 72.239 3 -0.24790282364878513 0.06356252187206454 0.7030575515306708 ['ENSG00000182195|ENST00000370526|LDOC1'] 129297 12748 VQVQVGSL True PC9_epitope_Rep5 828.4705175351999 828.46942993586 54.042 2 -0.24790423193613087 0.06357742743480183 0.7030594457289123 ['ENSG00000113805|ENST00000263665|CNTN3', 'CNTN3|p.D447Mfs*2|1|0.22|ENSG00000113805|chr3:74361915-74361915|C/-|frameshift_variant'] 111407 7025 THSLLDSP True PC9_epitope_Rep5 868.42904664604 868.4279499358599 31.991 2 -0.24792817077873516 0.06357742743480183 0.7030916404809436 ['ENST00000512959.1_1_4:55595508-55599400:+|nuORF'] 84909 5072 QEDDRYYTA True H1975_Epitope_Rep1 1159.47818166643 1159.47708993586 24.58 2 -0.24793901009433944 0.06357742743480183 0.7031062156016602 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 5966 12844 APHPPLSVV True PC9_epitope_Rep1 915.51780208079 915.51670993586 54.278 2 -0.24801885484778918 0.0635946737388806 0.7032135329657039 ['ENSG00000183856|ENST00000361170|IQGAP3'] 103053 7755 SPGADAELP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 34.814 1 -0.2481052372722936 0.06368558694611219 0.7033295460702405 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 3728 14594 AGSFLQDQF True PC9_epitope_Rep3 1011.4661604307499 1011.46506993586 61.264 2 -0.24816299361492292 0.06372124716845615 0.7034070609564813 ['nc|ENSG00000136535|Q16650-2|TBR1', 'ENSG00000136535|ENST00000389554|TBR1'] 14696 6479 DVKADNLSSD True PC9_epitope_Rep1 1062.4829326937001 1062.48182993586 29.726 2 -0.24825660759595855 0.06375690607734806 0.7035326105746772 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 72912 9972 MPVDRNLL True PC9_epitope_Rep4 956.51133680136 956.51022993586 46.018 2 -0.24828010036863232 0.06376827606525982 0.7035641002887264 ['nc|ENSG00000114805|Q4KWH8-2|PLCH1', 'ENSG00000114805|ENST00000460012|PLCH1', 'nc|ENSG00000114805|Q4KWH8|PLCH1', 'nc|ENSG00000114805|Q4KWH8-3|PLCH1', 'nc|ENSG00000114805|Q4KWH8-4|PLCH1', 'PLCH1|p.E1139Kfs*38|1|0.33|ENSG00000114805|chr3:155482635-155482635|C/-|frameshift_variant'] 33817 17401 GLLYHIVL True PC9_epitope_Rep1 926.55893861678 926.55784993586 71.734 2 -0.24829916888297743 0.06376827606525982 0.7035896545918978 ['ENST00000237937.7_1_9:74969735-74969897:-|nuORF'] 10107 13443 AYVDKYKYS True H1975_Epitope_Rep1 1135.55497543515 1135.5538699358601 56.822 2 -0.2483119840666547 0.06376827606525982 0.7036068260300917 ['ENSG00000139218|ENST00000369367|SCAF11', 'nc|ENSG00000139218|Q99590-2|SCAF11'] 89577 4993 QYNPHVHQL True PC9_epitope_Rep2 1134.55704112382 1134.55540490379 24.577 3 -0.24831638289104216 0.06376827606525982 0.7036127196643813 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 100542 10901 SLAWPFCKSK True H1975_Epitope_Rep3 1165.5954007784899 1165.59430993586 47.016 2 -0.24833383342596843 0.06376827606525982 0.7036360978356522 ['ENST00000556631.1_1_14:56139883-56140117:+|nuORF'] 107961 22295 SVYEGGVFFL True PC9_epitope_Rep4 1116.5491617787197 1116.5480699358602 93.996 2 -0.2483428382317288 0.06376827606525982 0.7036481599083726 ['nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000493707.1_1_3:23907959-23932094:+|nuORF', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'ENST00000475680.5_1_3:23852460-23932094:+|nuORF', 'nc|ENSG00000170142|P51965-2|UBE2E1', 'ENSG00000182247|ENST00000396703|UBE2E2', 'ENSG00000170035|ENST00000410062|UBE2E3', 'UBE2E3|p.G102C|2|0.1|ENSG00000170035|chr2:181057751-181057751|G/T|missense_variant', 'UBE2E3|p.D113N|1|0.41|ENSG00000170035|chr2:181057784-181057784|G/A|missense_variant', 'ENST00000411687.1_1_X:14262689-14263010:+|nuORF'] 34002 13422 GLTLAQVTG True PC9_epitope_Rep6 858.4810822188999 858.47998993586 63.309 2 -0.24840242048896624 0.0638039295118493 0.7037279454308606 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 6512 5434 APTASTVSA True PC9_epitope_Rep5 803.40249754503 803.40140993586 25.912 2 -0.24843470244010143 0.0638211681520218 0.7037711548942011 ['ENST00000338302.7_1_1:156876157-156878457:+|nuORF'] 84714 10711 QDPDCLFCEDP True H1975_Epitope_Rep3 1280.4689395056798 1280.4678499358602 46.277 2 -0.2485579240241118 0.06385681931171629 0.7039359665451812 ['ENSG00000164756|ENST00000456015|SLC30A8', 'nc|ENSG00000164756|Q8IWU4-2|SLC30A8'] 59278 8832 LFGDHYDTM True NCI_RA007_Epitope_Rep4 1097.4487961144503 1097.4476899358601 40.782 2 -0.24859891820891256 0.06389246915853435 0.7039907548473788 ['ENSG00000174607|ENST00000310836|UGT8'] 35120 14967 GQVVHLTLV True PC9_epitope_Rep6 964.57056592964 964.56946993586 69.58 2 -0.24873255193122504 0.06397982104061568 0.7041692084742234 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ'] 58096 8174 LEKCFQTENP True H1975_Epitope_Rep2 1207.5543238121497 1207.5532299358601 36.392 2 -0.2487384023246621 0.06397982104061568 0.7041770159383735 ['ENSG00000081051|ENST00000395792|AFP'] 103625 6602 SPTGKEFVSA True PC9_epitope_Rep4 1021.5080252427299 1021.50692993586 32.554 2 -0.24873992532628617 0.06397982104061568 0.7041790483434447 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766642-105766726:+|nuORF'] 79106 6354 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 29.25 2 -0.2487574373094038 0.06397982104061568 0.7042024155317229 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 35190 10563 GRADGYVL True PC9_epitope_Rep3 849.43446637965 849.43336993586 45.577 2 -0.24888192027428918 0.06402916106702995 0.7043684093869415 ['ENSG00000142937|ENST00000396651|RPS8'] 20385 8521 EPAGEAVALA True H1975_Epitope_Rep2 926.4709114580198 926.4703649679301 37.731 1 -0.24889615946866464 0.06402916106702995 0.7043873845399037 ['ENSG00000104626|ENST00000250263|ERI1'] 112442 22575 TLDDLIAAV True PC9_epitope_Rep1 929.50696261357 929.50586993586 91.641 2 -0.24892455498335372 0.06402916106702995 0.7044252168578197 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1', 'ENST00000462121.1_1_5:139876268-139877642:+|nuORF'] 135949 7783 WPYLSPRRKSP True H1975_Epitope_Rep1 1385.75680355953 1385.75515490379 34.892 3 -0.2489470002868104 0.06402916106702995 0.7044551143922779 ['nc|ENSG00000170264|Q3B820-2|FAM161A', 'nc|ENSG00000170264|Q3B820|FAM161A', 'ENSG00000170264|ENST00000404929|FAM161A'] 135822 15379 WNPRRWWRWCW True NCI_RA007_Epitope_Rep2 1730.8153385785 1730.81424993586 64.519 2 -0.24905646932265357 0.06402916106702995 0.7046008391524607 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 36192 4373 GVAWRRDGT True NCI_RA007_Epitope_Rep3 1016.5151763118398 1016.51406993586 23.971 2 -0.24908865986734824 0.0640452127169971 0.7046436627296883 ['ENST00000413040.6_1_7:151038900-151042524:+|nuORF'] 83799 8406 PVLEHPDCFP True H1975_Epitope_Rep1 1152.52738078832 1152.5262899358602 37.262 2 -0.2490976049214981 0.0640452127169971 0.7046555601878639 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET', 'MET|p.C98F|1|0.11|ENSG00000105976|chr7:116699377-116699377|G/T|missense_variant'] 18980 10404 ELENLQKLNVS True NCI_RA007_Epitope_Rep1 1285.68778050985 1285.6866899358602 44.453 2 -0.24912816896098935 0.06405890473999079 0.7046962046974851 ['ENSG00000066557|ENST00000370952|LRRC40'] 26462 11216 FIDKVRFL True H1975_Epitope_Rep2 1036.6069514383598 1036.60584993586 48.183 2 -0.249131984696447 0.06405890473999079 0.7047012781047288 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT3|p.V305*|1|0.36|ENSG00000186442|chr12:52793177-52793177|C/-|frameshift_variant', 'ENSG00000170423|ENST00000304620|KRT78', 'CON__Q8N1N4-2', 'CON__Q7RTT2', 'KRT85|p.Q147L|1|0.28|ENSG00000135443|chr12:52365151-52365151|T/A|missense_variant', 'KRT77|p.S177Y|1|0.04|ENSG00000189182|chr12:52702905-52702905|G/T|missense_variant', 'KRT2|p.S191F|1|0.22|ENSG00000172867|chr12:52651571-52651571|G/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'CON__Q6IFZ6', 'CON__Q7Z794', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q3TTY5', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5', 'ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386', 'CON__Q61726', 'KRT83|p.C462Afs*7|1|0.62|ENSG00000170523|chr12:52314730-52314730|G/-|frameshift_variant', 'ENSG00000170442|ENST00000423955|KRT86', 'CON__O43790', 'ENSG00000170523|ENST00000293670|KRT83', 'CON__Q6NT21', 'CON__P78385', 'ENSG00000205426|ENST00000327741|KRT81', 'CON__Q14533'] 89551 19071 QYLTAAALHNL True PC9_epitope_Rep5 1213.6455217750497 1213.6444299358602 78.387 2 -0.24916712489828574 0.06405890473999079 0.7047479920777688 ['ENSG00000115008|ENST00000263339|IL1A'] 1868 12138 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.48512993586 51.857 2 -0.24921391412743485 0.06405890473999079 0.7048101680443497 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 109687 16156 TEDARTILEL True PC9_epitope_Rep2 1159.6084675599898 1159.60736993586 67.398 2 -0.24927328222859063 0.0640749535221897 0.7048890204596889 ['ENSG00000005189|ENST00000261377|REXO5', 'nc|ENSG00000005189|Q96IC2-2|REXO5'] 69234 12287 LTSSSPIPR True PC9_epitope_Rep3 956.52909504048 956.52798993586 52.29 2 -0.24929382656370544 0.0640749535221897 0.704916297190563 ['nc|ENSG00000165806|P55210-2|CASP7'] 108286 20544 SYILRLEEI True PC9_epitope_Rep5 1134.62847472858 1134.62736993586 84.067 2 -0.24932147357367154 0.0641278138747262 0.7049529959166809 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 137960 8686 YFHRKHWVRIR True NCI_RA007_Epitope_Rep3 1596.89021777092 1596.8885849037902 41.247 3 -0.24932611010196834 0.0641278138747262 0.7049591495341583 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF'] 18331 12968 EISQELLY True H1975_Epitope_Rep1 993.50187723313 993.50078993586 54.958 2 -0.2493354352888511 0.06414503957297994 0.7049715251527945 ['ENSG00000134698|ENST00000373210|AGO4'] 75248 10441 NIEEDIRNGLK True NCI_RA007_Epitope_Rep2 1299.67827845531 1299.67718993586 45.205 2 -0.24942921262102688 0.06416108370757564 0.7050959190470246 ['ACTN2|p.F66I|1|0.45|ENSG00000077522|chr1:236717927-236717927|T/A|missense_variant'] 140621 27634 YRRQLRWKMLQ True PC9_epitope_Rep3 1576.8772701287196 1576.8761699358602 114.17 2 -0.2494421913390937 0.06416108370757564 0.7051131265368541 ['nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1', 'ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1'] 54373 12892 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.5338699358601 54.606 2 -0.2495524227357049 0.0641967128632691 0.7052591903559501 ['ENSG00000123975|ENST00000314355|CKS2'] 85330 6325 QESPGGLEA True H1975_Epitope_Rep2 886.4032258210199 886.40212993586 29.262 2 -0.24960854048650738 0.06425074538962712 0.7053334926984762 ['ENSG00000121892|ENST00000303538|PDS5A', 'chr4:39825488-39837932|110|16.31|0.92|4.15|-|2|PDS5A,None|1'] 87390 19728 QPVLGALAV True PC9_epitope_Rep3 866.5225531080599 866.52144993586 81.113 2 -0.24968656355595786 0.0642679672402687 0.7054367344604842 ['TRPM6|p.E8Gfs*11|1|0.16|ENSG00000119121|chr9:74887839-74887840|-/T|frameshift_variant'] 84449 20129 QAFVLARYL True PC9_epitope_Rep5 1079.61276509479 1079.6116699358602 82.474 2 -0.24974169235736526 0.06430359246171967 0.7055096371050548 ['ENST00000475890.5_1_12:53552117-53555118:-|nuORF', 'nc|ENSG00000139631|Q9Y600-2|CSAD', 'ENSG00000139631|ENST00000444623|CSAD', 'nc|ENSG00000139631|Q9Y600-3|CSAD'] 100631 22330 SLDDLTNLV True PC9_epitope_Rep1 988.5076908895601 988.50714496793 90.706 1 -0.24980940033999002 0.06432081270589102 0.7055991236928189 ['ENSG00000119912|ENST00000265986|IDE', 'ENST00000478361.6_1_10:94240585-94297282:-|nuORF'] 127089 8226 VLTEAGYY True NCI_RA007_Epitope_Rep5 914.43854870058 914.43744993586 38.32 2 -0.24983121246787846 0.06435525129280996 0.7056279398770647 ['GLB1L2|p.D353Y|1|0.24|ENSG00000149328|chr11:134369834-134369834|G/T|missense_variant'] 111251 7814 THLASDTIY True H1975_Epitope_Rep3 1019.49237517859 1019.49126993586 35.04 2 -0.24984613992210078 0.06435525129280996 0.7056476573158523 ['BMX|p.P634T|1|0.65|ENSG00000102010|chrX:15549944-15549944|C/A|missense_variant'] 46439 14731 ISTCASHFTL True PC9_epitope_Rep1 1078.51173072418 1078.5106299358602 61.485 2 -0.249917175565604 0.06436773148829678 0.7057414499576264 ['OR6N1|p.V247L|1|0.55|ENSG00000197403|chr1:158765944-158765944|C/G|missense_variant'] 110915 5953 TGVPYRTGNQ True NCI_RA007_Epitope_Rep4 1091.53597132607 1091.5348699358601 29.518 2 -0.24992347347489108 0.06436773148829678 0.7057497625005417 ['ENST00000308436.11_1_11:62343181-62343496:-|nuORF'] 110899 5614 TGVFRNQVD True NCI_RA007_Epitope_Rep3 1034.5145076054998 1034.5134099358602 29.076 2 -0.24993505180667133 0.06436773148829678 0.7057650433567754 ['ENSG00000244509|ENST00000361441|APOBEC3C'] 127092 13150 VLTEEKGSVI True PC9_epitope_Rep2 1073.5968402471299 1073.59574993586 55.852 2 -0.24998786403086173 0.06436773148829678 0.7058347232144291 ['ENSG00000204290|ENST00000454136|BTNL2', 'nc|ENSG00000204290|Q9UIR0-1|BTNL2'] 58373 8596 LENLIIKQGEQ True H1975_Epitope_Rep3 1283.7085159544301 1283.7074099358601 38.055 2 -0.2500453640656105 0.06436773148829678 0.7059105495728594 ['nc|ENSG00000172673|Q8N1K5-3|THEMIS', 'nc|ENSG00000172673|Q8N1K5-2|THEMIS', 'ENSG00000172673|ENST00000368248|THEMIS', 'nc|ENSG00000172673|Q8N1K5-4|THEMIS'] 81068 18541 PIRLEFEKV True PC9_epitope_Rep3 1129.64954452633 1129.64788490379 76.538 3 -0.2501126443614287 0.06440334897414665 0.7059992224005781 ['ENSG00000062822|ENST00000440232|POLD1'] 6531 10060 APTLPGSAA True PC9_epitope_Rep2 783.41266830591 783.41156993586 44.025 2 -0.250186075733101 0.06442056453096824 0.7060959395116371 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 35959 17498 GTVASLTMVAL True PC9_epitope_Rep1 1061.5790820080101 1061.5779899358602 72.101 2 -0.25020687737292735 0.06443540819518298 0.7061233256764119 ['ENSG00000130827|ENST00000369682|PLXNA3'] 102230 3584 SLSFFFVFRDR True NCI_RA007_Epitope_Rep2 1419.72992010535 1419.7282649037902 18.59 3 -0.25021049649867766 0.06443540819518298 0.7061280898613828 ['ENST00000393892.7_1_17:40126102-40126558:+|nuORF'] 114129 12077 TPHFSGLAA True PC9_epitope_Rep5 899.4501164437899 899.44900993586 51.448 2 -0.25023616591519976 0.06443540819518298 0.7061618763099826 ['ENSG00000178952|ENST00000313511|TUFM'] 12071 20291 DHTVGFIL True PC9_epitope_Rep1 900.4705175351999 900.4699649679301 82.876 1 -0.2502889275092082 0.0644526218951242 0.7062312968756906 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 57411 9791 LEASCWIPL True PC9_epitope_Rep3 1030.5157534754599 1030.51464993586 42.613 2 -0.2502936724312061 0.06446746269755119 0.7062375383150398 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 83032 11441 PSKTIPGL True PC9_epitope_Rep5 811.4803539429099 811.47924993586 49.006 2 -0.2503834672382031 0.06446746269755119 0.7063556026485438 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 101066 17877 SLGFDVRDHYK True PC9_epitope_Rep1 1335.6571490879098 1335.6555149037902 73.557 3 -0.2504253174302518 0.06446746269755119 0.7064105950994031 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 64691 16771 LPVRLPLA True PC9_epitope_Rep6 877.5749230340899 877.57382993586 77.004 2 -0.25042858063176304 0.06448467454097215 0.706414882162087 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 57749 8464 LEENQVKK True H1975_Epitope_Rep3 986.5396597241798 986.53856993586 37.541 2 -0.2504807107059215 0.06450188575108086 0.7064833512008319 ['ENSG00000072501|ENST00000322213|SMC1A'] 127446 7222 VNIGSSFENRP True H1975_Epitope_Rep3 1218.5992998586198 1218.59820993586 32.751 2 -0.2505028247388838 0.06451909632791228 0.706512386505473 ['ENSG00000158516|ENST00000222481|CPA2'] 36833 12875 GVLGSQVIV True NCI_RA007_Epitope_Rep4 870.51746772762 870.51691496793 56.607 1 -0.25053895497722556 0.064532744665195 0.7065598121950548 ['ENST00000374242.8_1_9:115478806-115480332:-|nuORF'] 110049 13004 TELEDSVQQMY True H1975_Epitope_Rep2 1341.57584710237 1341.5747499358602 55.137 2 -0.25054092852771787 0.064532744665195 0.7065624022886638 ['ENSG00000140743|ENST00000268383|CDR2'] 74477 11538 NEYLNKCFY True H1975_Epitope_Rep3 1192.52229540788 1192.52118993586 49.506 2 -0.25055887190099474 0.064532744665195 0.70658594908361 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000492174.1_1_9:138741977-138754403:-|nuORF'] 71556 5055 MAQTDPETND True PC9_epitope_Rep5 1120.43426824912 1120.4331699358602 24.471 2 -0.2505955045756591 0.064532744665195 0.7066340095644167 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 125305 6503 VINSVDIK True NCI_RA007_Epitope_Rep2 886.5123823471799 886.51128993586 29.904 2 -0.25066883992093725 0.06456834863229154 0.7067301740912115 ['ENSG00000071127|ENST00000499869|WDR1'] 13479 7415 DNIQTVKRLRT True NCI_RA007_Epitope_Rep1 1342.7680965192199 1342.76644490379 32.839 3 -0.25072469273472026 0.06460395128950369 0.7068033706753053 75983 19002 NLVKWESL True PC9_epitope_Rep6 987.5389314481899 987.53782993586 85.734 2 -0.2507716693776411 0.0646579475010577 0.7068649059744191 ['ENSG00000065802|ENST00000264607|ASB1'] 54914 7917 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 39.885 3 -0.25087385058349637 0.06470956112276055 0.7069986636244572 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 97594 8001 SEEVGIAEA True H1975_Epitope_Rep2 903.41854153199 903.41744993586 35.725 2 -0.25088884173005327 0.06470956112276055 0.7070182769440082 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 61658 8562 LKRKRKTFK True NCI_RA007_Epitope_Rep5 1203.7927951454296 1203.7911449037902 39.616 3 -0.2508909761190751 0.06470956112276055 0.707021069205213 ['ENST00000514814.5_1_5:64817333-64824304:-|nuORF'] 23238 7471 EVNGEVFQ True H1975_Epitope_Rep3 920.4239612655999 920.42286993586 33.716 2 -0.2510194991897087 0.06472557386698058 0.707189106617568 ['nc|ENSG00000145725|O43314-2|PPIP5K2', 'ENSG00000145725|ENST00000358359|PPIP5K2'] 64285 18484 LPISVAASI True PC9_epitope_Rep4 869.52221875489 869.52167496793 79.17 1 -0.2510505035916512 0.06472557386698058 0.7072296139818187 ['ENSG00000178401|ENST00000549441|DNAJC22'] 22843 9026 EVANSVGLTG True PC9_epitope_Rep1 945.4767251144499 945.47562993586 39.568 2 -0.2510765101136947 0.06475878685328576 0.7072635828215306 ['GRIN2B|p.A794Lfs*16|1|0.52|ENSG00000273079|chr12:13567243-13567243|C/-|frameshift_variant', 'ENSG00000273079|ENST00000609686|GRIN2B'] 112877 13231 TLKKAMLTFI True PC9_epitope_Rep2 1164.6940521906 1164.69241490379 56.171 3 -0.25107919888746705 0.06475878685328576 0.7072670943504427 ['ENST00000263708.6_1_2:120737192-120737405:+|nuORF'] 53476 3515 KRHCWMKQFK True NCI_RA007_Epitope_Rep1 1390.7114506735795 1390.70980490379 17.595 3 -0.25110379904029695 0.06475878685328576 0.7072992180920045 ['LRRIQ1|p.S1543Ifs*14|1|0.13|ENSG00000133640|chr12:85153747-85153748|-/ATCTTGAAAGGCAATAAAAGTC|frameshift_variant', 'nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF', 'ENST00000529408.1_1_12:85431954-85441296:+|nuORF', 'LRRIQ1|p.L280*|1|0.25|ENSG00000133640|chr12:85055631-85055631|T/-|frameshift_variant', 'LRRIQ1|p.I328Nfs*38|1|0.25|ENSG00000133640|chr12:85055770-85055771|-/A|frameshift_variant', 'LRRIQ1|p.V216F|1|0.72|ENSG00000133640|chr12:85047438-85047438|G/T|missense_variant'] 133333 10097 VVVATIKSV True PC9_epitope_Rep4 914.5800679841799 914.57896993586 46.509 2 -0.25125488501763654 0.06484597701149425 0.7074963547402671 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'PSEN1|p.G402Efs*7|1|0.49|ENSG00000080815|chr14:73217200-73217200|G/-|frameshift_variant', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1', 'nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 79104 5847 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 27.304 2 -0.2512779671002408 0.06484597701149425 0.7075264485040632 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 110850 17221 TGQWSYAAP True PC9_epitope_Rep1 979.4399456829099 979.43884993586 71.059 2 -0.2512899186150431 0.06484597701149425 0.7075420280876943 ['ENSG00000124743|ENST00000370905|KLHL31'] 123063 9273 VGKDSYVEL True NCI_RA007_Epitope_Rep4 1008.5127762699999 1008.51166993586 42.522 2 -0.25129628734335374 0.06484597701149425 0.707550329457131 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3'] 84677 17702 QDKEEVVL True PC9_epitope_Rep5 958.4971262058598 958.49602993586 73.107 2 -0.25139439283422277 0.06485840382493564 0.7076781456753792 ['ENSG00000077147|ENST00000371142|TM9SF3'] 114444 15740 TPVITSTQV True PC9_epitope_Rep4 944.5178616504401 944.51676993586 68.468 2 -0.2514419840630333 0.06485840382493564 0.7077401090231809 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'MUC17|p.N4447Kfs*5|1|0.28|ENSG00000169876|chr7:101053409-101053410|-/A|frameshift_variant', 'ENSG00000169876|ENST00000306151|MUC17'] 128659 11345 VPVIISRA True PC9_epitope_Rep3 853.53853752537 853.53744993586 48.643 2 -0.2514445157561343 0.06485840382493564 0.7077434045222248 ['nc|ENSG00000175550|Q14919-2|DRAP1', 'ENSG00000175550|ENST00000312515|DRAP1'] 114074 13376 TPFEKGLHVV True PC9_epitope_Rep5 1125.61824439805 1125.6166049037902 56.467 3 -0.2514610937508534 0.06485840382493564 0.7077649822075104 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 131335 14804 VTGLQYSV True PC9_epitope_Rep6 865.45453311789 865.45342993586 68.913 2 -0.25153889728320084 0.06485840382493564 0.707866207310574 ['nc|ENSG00000134313|Q9ULH0-3|KIDINS220'] 89483 19046 QYGGDLTNTF True PC9_epitope_Rep5 1114.49310345458 1114.4925749679298 78.289 1 -0.251602442027953 0.0648755999338004 0.707948828873917 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 91446 8860 RHPGVLSL True PC9_epitope_Rep2 877.51338540669 877.5122899358599 39.431 2 -0.25178919968612085 0.06490879670491322 0.7081913816821752 ['ENST00000468965.2_1_3:47462484-47464052:-|nuORF'] 137608 8485 YEEWAERRLQA True H1975_Epitope_Rep3 1449.7000765290497 1449.69896993586 37.623 2 -0.25181290653378463 0.06490879670491322 0.7082221422237589 ['ATP8B2|p.V1008Cfs*94|1|0.11|ENSG00000143515|chr1:154346372-154346372|G/-|frameshift_variant', 'ENSG00000143515|ENST00000368489|ATP8B2', 'nc|ENSG00000143515|P98198|ATP8B2', 'nc|ENSG00000143515|P98198-3|ATP8B2'] 82992 14758 PSGFTITSA True PC9_epitope_Rep6 879.43379767331 879.43270993586 68.718 2 -0.2518523223713566 0.06490879670491322 0.7082732714137454 ['ENST00000171757.2_1_X:78216246-78216354:+|nuORF'] 6100 21170 APLVTLEVL True PC9_epitope_Rep6 953.57973363101 953.57862993586 94.276 2 -0.2518620471589686 0.06492240935500478 0.7082858833957858 ['ENSG00000125872|ENST00000378858|LRRN4'] 34051 16749 GLVLSLEEQL True PC9_epitope_Rep6 1099.61249031127 1099.6113899358602 76.916 2 -0.2519140949500978 0.06492240935500478 0.708353365138547 ['ENSG00000116830|ENST00000369466|TTF2'] 44494 12702 ILLKAASQ True PC9_epitope_Rep2 842.52255310806 842.52144993586 54.164 2 -0.251971967253076 0.06492240935500478 0.7084283619488532 ['ENSG00000144357|ENST00000272793|UBR3', 'nc|ENSG00000144357|Q6ZT12-4|UBR3'] 29449 19352 FVEHGPYVVT True PC9_epitope_Rep6 1146.5709598524597 1146.5698699358602 87.086 2 -0.2520082855960828 0.06492240935500478 0.7084754072922869 ['CPVL|p.L318Afs*6|1|0.28|ENSG00000106066|chr7:29066033-29066034|AA/-|frameshift_variant', 'CPVL|p.L381*|1|0.07|ENSG00000106066|chr7:29030756-29030756|G/-|frameshift_variant', 'CPVL|p.I382Sfs*14|1|0.07|ENSG00000106066|chr7:29030754-29030754|C/-|frameshift_variant', 'ENSG00000106066|ENST00000265394|CPVL'] 139629 9821 YMDYRGYSY True H1975_Epitope_Rep3 1216.4859098991599 1216.48480993586 42.803 2 -0.2520607494891348 0.06493840779555066 0.7085433402231253 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'CHD1L|p.R589Wfs*2|1|0.24|ENSG00000131778|chr1:147284408-147284426|ACAGAAAATCATTTGAACA/-|frameshift_variant', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L'] 85157 8279 QENFELLQEYY True H1975_Epitope_Rep2 1474.66162533166 1474.65997490379 36.796 3 -0.2520776296968652 0.06493840779555066 0.70856519087254 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B'] 131654 15668 VTLTSIVP True PC9_epitope_Rep2 828.49566965388 828.49456993586 65.544 2 -0.25213985035584296 0.06495321089110731 0.7086457044859923 ['ENSG00000165912|ENST00000298838|PACSIN3'] 47819 19577 IYGLLKNPF True PC9_epitope_Rep4 1063.60661708519 1063.6055299358602 83.426 2 -0.25215201429235207 0.06495321089110731 0.7086614394647079 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1', 'ENST00000463270.1_1_10:27418274-27425210:-|nuORF'] 84293 18090 PYRLIFEKF True PC9_epitope_Rep4 1211.6702799709099 1211.66863490379 77.65 3 -0.2521601386773926 0.06495321089110731 0.7086719480346969 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 37605 10383 GVVRGRPVTP True NCI_RA007_Epitope_Rep3 1036.6141620771198 1036.61306993586 47.899 2 -0.2522131392568214 0.06497040114718536 0.7087404837016551 ['ENST00000603791.1_1_6:3751774-3752740:+|nuORF'] 64944 13572 LQELLELDSK True NCI_RA007_Epitope_Rep2 1186.6445187155398 1186.64342993586 57.432 2 -0.25227891218056053 0.06502316346790205 0.7088254909343021 ['COL28A1|p.P350Lfs*88|1|0.16|ENSG00000215018|chr7:7490624-7490624|G/-|frameshift_variant'] 59874 13323 LGGALSWE True H1975_Epitope_Rep3 831.41266830591 831.41211496793 56.507 1 -0.252318193185792 0.06502316346790205 0.7088762356178021 ['ENST00000371717.7_1_9:139317959-139318130:+|nuORF'] 87990 16573 QRNEVVVEL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 68.752 2 -0.2523367794345717 0.06503915585131806 0.7089002399276474 ['ENSG00000186432|ENST00000334256|KPNA4'] 15442 19048 EALFQPSFL True NCI_RA007_Epitope_Rep1 1050.53859709502 1050.53750993586 78.234 2 -0.2523581289008834 0.06503915585131806 0.7089278081213178 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 44815 9254 INAKANAK True PC9_epitope_Rep3 828.4817509252399 828.48064993586 40.541 2 -0.25240405050591913 0.06507352941176471 0.7089870883816997 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10'] 75207 13414 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.4842749679299 56.711 1 -0.2524048781232133 0.06507352941176471 0.7089881565348521 ['ENSG00000116285|ENST00000377482|ERRFI1'] 61464 18516 LIYRKLLP True PC9_epitope_Rep6 1014.6589870112199 1014.65788993586 83.863 2 -0.2524249124372369 0.06508832233516534 0.7090140111883144 ['chr8:40114873-40125442|196|46.56|0.21|7.78|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 23377 8950 EVRSSGLGL True PC9_epitope_Rep1 916.4977949121999 916.49668993586 39.269 2 -0.25253721129251655 0.06508832233516534 0.7091588509795579 ['chr11:57741926-57742117|112|16.38|0.0|20.64|+|0|None,SELENOH|1'] 72363 19212 MITEASFYL True NCI_RA007_Epitope_Rep1 1073.51033374185 1073.5097749679298 78.88 1 -0.2525537717198388 0.06508832233516534 0.7091801981002412 ['CLCA2|p.A725Sfs*9|1|0.16|ENSG00000137975|chr1:86453386-86453387|GC/-|frameshift_variant', 'ENSG00000137975|ENST00000370565|CLCA2', 'CLCA2|p.D389Tfs*18|1|0.22|ENSG00000137975|chr1:86439068-86439068|G/-|frameshift_variant', 'CLCA2|p.G706Rfs*15|1|0.09|ENSG00000137975|chr1:86450692-86450693|-/A|frameshift_variant'] 62612 10776 LLLCPYTVERE True H1975_Epitope_Rep1 1334.69042336214 1334.68932993586 46.413 2 -0.2525851449063361 0.06510191703273475 0.7092206310542312 ['ENST00000472045.1_1_5:131820398-131820557:-|nuORF'] 17932 10262 EIAQDFKTDLR True PC9_epitope_Rep6 1334.68302948258 1334.6813849037899 50.151 3 -0.25258683707688856 0.06510191703273475 0.7092228115652042 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 101736 13161 SLNILSSSN True H1975_Epitope_Rep3 933.4767251144501 933.4761749679301 55.874 1 -0.2525870608822159 0.06510191703273475 0.7092230999556919 ['ENST00000486056.1_1_9:35732760-35733244:+|nuORF', 'nc|ENSG00000107175|O43889-3|CREB3', 'ENSG00000107175|ENST00000353704|CREB3'] 79115 5523 PALPPQAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 26.324 2 -0.2526484778167569 0.06510191703273475 0.7093022191531525 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 13478 6887 DNIQTVKRLRT True H1975_Epitope_Rep1 1342.7680965192199 1342.76644490379 31.535 3 -0.2527154097048118 0.06513388836816085 0.7093883946762877 72865 11354 MPQSGTGVSV True PC9_epitope_Rep3 961.45388149489 961.45333496793 48.677 1 -0.25273501550995625 0.06513388836816085 0.7094136278558516 ['ENSG00000115233|ENST00000409682|PSMD14'] 14464 7226 DTETKQQY True H1975_Epitope_Rep2 1011.4509042894299 1011.44980993586 32.729 2 -0.2527422872682222 0.06513388836816085 0.7094229857035796 ['ENSG00000132953|ENST00000255305|XPO4'] 87487 6284 QQEANLGT True PC9_epitope_Rep1 859.4035601741899 859.40246993586 28.985 2 -0.25276285912906393 0.06513388836816085 0.7094494559242503 ['ENSG00000163885|ENST00000352312|CFAP100', 'nc|ENSG00000163885|Q494V2-2|CFAP100'] 93307 5456 RPRVTEPISA True PC9_epitope_Rep4 1124.6302060640799 1124.62855490379 27.725 3 -0.25281750773794825 0.0651694479159009 0.7095197504032766 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 79129 6001 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 28.078 2 -0.2528787358080055 0.06520500615661698 0.7095984684613897 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 28138 15986 FRDAFTQEL True PC9_epitope_Rep4 1125.54547338061 1125.54436993586 69.424 2 -0.2529460665919842 0.06523097276836573 0.7096849843095876 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 23028 13539 EVGETLLY True H1975_Epitope_Rep1 922.46476344842 922.46421496793 57.199 1 -0.2529507904047252 0.06523097276836573 0.7096910522219584 ['ENSG00000127948|ENST00000461988|POR'] 12399 14462 DITELYSTL True PC9_epitope_Rep3 1053.5230066005302 1053.52190993586 60.732 2 -0.2529712375120537 0.06523097276836573 0.7097173144311261 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 100029 14997 SIQRTCLDL True PC9_epitope_Rep2 1047.5382798251899 1047.5371899358602 62.942 2 -0.2529982522291262 0.06523097276836573 0.7097520049466867 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 543 5864 AAPTRHPIHIK True NCI_RA007_Epitope_Rep5 1239.72002412799 1239.71836490379 29.241 3 -0.2530035811343712 0.06523097276836573 0.7097588470191999 ['ENSG00000164399|ENST00000296870|IL3'] 26461 11702 FIDITEVRW True H1975_Epitope_Rep3 1177.6131590176099 1177.61206993586 50.152 2 -0.253020880236535 0.06523097276836573 0.7097810561121752 ['ENSG00000172244|ENST00000306862|C5orf34', 'ENST00000514462.1_1_5:43505848-43515051:-|nuORF'] 53355 16694 KQQQQLVL True PC9_epitope_Rep4 983.5763795860697 983.57528993586 72.188 2 -0.25303276030791694 0.06523097276836573 0.7097963061748697 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 29913 17653 FVWSGTAEA True PC9_epitope_Rep4 966.4446967101799 966.44414496793 75.928 1 -0.25304545540693 0.06523097276836573 0.709812600734833 ['ENSG00000124422|ENST00000261497|USP22'] 32700 6863 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.3753949679301 33.081 1 -0.25309658045445554 0.06523097276836573 0.7098782032974893 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 25810 19026 FEYLSYCL True PC9_epitope_Rep1 1036.4575698929998 1036.45646993586 77.974 2 -0.253109208031759 0.06524095610795716 0.7098944022843596 ['ENSG00000100151|ENST00000356976|PICK1', 'nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 19831 15000 ELSRSLSVGL True PC9_epitope_Rep6 1059.59242357303 1059.5913299358601 69.719 2 -0.25314205274200396 0.06524095610795716 0.7099365280943838 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB'] 85551 15106 QGELDGFL True H1975_Epitope_Rep3 877.4181476091699 877.4175949679301 63.504 1 -0.2531466907426291 0.06524095610795716 0.7099424757197776 ['ENSG00000219626|ENST00000615575|FAM228B'] 101433 14149 SLKRRFYFKE True PC9_epitope_Rep3 1372.7615545868 1372.7599049037901 59.508 3 -0.2531559243917577 0.06524095610795716 0.7099543159533073 ['ENST00000486187.5_1_10:43078317-43078551:-|nuORF'] 135824 16641 WNPRRWWRWCW True PC9_epitope_Rep2 1730.8153385785 1730.81424993586 69.255 2 -0.2531936950606419 0.06524095610795716 0.7100027391932237 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 121296 5458 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44962496793 26.021 1 -0.25320396622814334 0.06524095610795716 0.7100159044506021 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 109052 19823 TAISLFYEL True NCI_RA007_Epitope_Rep5 1055.5539128059902 1055.55337496793 83.16 1 -0.25321929240376506 0.06524095610795716 0.7100355468987184 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant'] 84448 20196 QAFVLARYL True PC9_epitope_Rep1 1079.61276509479 1079.6116699358602 82.513 2 -0.25322927967835035 0.06525812970788168 0.7100483454739639 ['ENST00000475890.5_1_12:53552117-53555118:-|nuORF', 'nc|ENSG00000139631|Q9Y600-2|CSAD', 'ENSG00000139631|ENST00000444623|CSAD', 'nc|ENSG00000139631|Q9Y600-3|CSAD'] 6990 11646 AQLILKAI True NCI_RA007_Epitope_Rep4 868.57458868092 868.57348993586 51.753 2 -0.2532545150922456 0.06527530267678346 0.7100806794750398 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000511494.5_1_5:134670668-134681802:-|nuORF', 'ENST00000512507.5_1_5:134670668-134688768:-|nuORF'] 70630 25025 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 108.17 3 -0.25329931863117694 0.06529247501469723 0.7101380687779252 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 36920 16057 GVLQLGNIVFK True NCI_RA007_Epitope_Rep2 1186.70739375562 1186.70628993586 67.177 2 -0.2534396819142706 0.0653819304111401 0.7103177191489536 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 62163 20630 LLELGEDAKLP True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 84.173 2 -0.25349328336688776 0.0653819304111401 0.7103862666344541 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 109841 10773 TEELLANSL True PC9_epitope_Rep5 988.50769088956 988.50658993586 46.43 2 -0.25352957643824964 0.06541747037751447 0.7104326617627476 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 18051 14769 EIFHLNSV True PC9_epitope_Rep2 957.49198125577 957.49088993586 62.074 2 -0.253570617445472 0.06543223483596017 0.7104851091393836 ['PCDHGA3|p.L732Ffs*55|1|0.3|ENSG00000254245|chr5:141346226-141346227|-/T|frameshift_variant', 'nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3', 'ENSG00000254245|ENST00000253812|PCDHGA3', 'PCDHGA3|p.G299R|1|0.59|ENSG00000254245|chr5:141344928-141344928|G/A|missense_variant'] 10934 7817 DAEVSAVRLK True H1975_Epitope_Rep3 1086.6033226098998 1086.6022299358601 35.051 2 -0.25359245190537394 0.06543223483596017 0.710513004510085 ['ENSG00000274443|ENST00000624510|C8orf89'] 80999 8452 PIKNQQSV True PC9_epitope_Rep4 912.50288029264 912.50178993586 39.975 2 -0.2535977630501894 0.06543223483596017 0.710519789164706 ['ENSG00000181378|ENST00000341552|CFAP65'] 107603 16498 SVPNKDVFQEL True PC9_epitope_Rep4 1274.65066672514 1274.6495699358602 71.43 2 -0.2536437362493857 0.06548614045077977 0.7105785042612408 ['ENSG00000115919|ENST00000264170|KYNU'] 66538 11969 LSHVLNQTL True PC9_epitope_Rep2 1023.5712942056299 1023.57018993586 51.359 2 -0.25372767938834767 0.065521675238795 0.7106856539823017 ['ZNF536|p.G611V|1|0.12|ENSG00000198597|chr19:30445394-30445394|G/T|missense_variant'] 42119 15027 IDMNDIKAFY True H1975_Epitope_Rep1 1228.579810284 1228.5787099358602 63.049 2 -0.25379346235313144 0.06553884021233997 0.7107695698500492 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 76598 19133 NQMDGFDTL True PC9_epitope_Rep4 1039.4280606698699 1039.42747496793 81.689 1 -0.2538941501400117 0.06555600455530657 0.7108979217221563 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 102990 14751 SPFGSITSA True PC9_epitope_Rep6 865.4181476091701 865.41704993586 68.689 2 -0.25401696045493055 0.06556835087332635 0.7110543270638432 ['nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 101536 10651 SLLGEELPP True H1975_Epitope_Rep2 953.5069626135698 953.50586993586 45.994 2 -0.2540174644035442 0.06556835087332635 0.7110549685362284 ['ENSG00000089558|ENST00000264661|KCNH4'] 137622 8288 YEGAGQILIR True H1975_Epitope_Rep3 1118.6084079903399 1118.60730993586 36.863 2 -0.2540732677975604 0.06556835087332635 0.711125983482537 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK'] 58609 9277 LEQTDIQGA True H1975_Epitope_Rep1 973.4716397340097 973.4710949679301 40.596 1 -0.25409410938284543 0.06556835087332635 0.7111524977961308 ['ENSG00000198730|ENST00000361367|CTR9'] 82616 5036 PQGEREAEQK True NCI_RA007_Epitope_Rep5 1170.5629143498998 1170.56125490379 26.073 3 -0.25410698366767054 0.06556835087332635 0.7111688739321045 ['ENST00000461997.5_1_12:2997543-2997672:+|nuORF'] 32173 6282 GEVPESPEA True H1975_Epitope_Rep2 913.4028914678499 913.40178993586 29.107 2 -0.2541799205444428 0.06558310376492195 0.7112616166024538 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 99432 8968 SIAFSSQTL True PC9_epitope_Rep1 952.4865615221601 952.48546993586 39.34 2 -0.25418355199879294 0.06558310376492195 0.7112662326899641 ['nc|ENSG00000215474|Q2VWA4-2|SKOR2'] 91566 8299 RIIPRHLQL True NCI_RA007_Epitope_Rep4 1144.719295852 1144.7176649037901 38.732 3 -0.2541864002011255 0.06558310376492195 0.711269853056397 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 70273 11387 LVRNPVLQ True PC9_epitope_Rep5 937.5709002828098 937.56980993586 48.798 2 -0.2542519818473591 0.06561862959357954 0.7113531904634485 ['ENST00000557951.1_1_15:73996325-74000993:+|nuORF', 'nc|ENSG00000103855|Q5ZPR3-2|CD276', 'nc|ENSG00000103855|Q5ZPR3-3|CD276', 'nc|ENSG00000103855|Q5ZPR3-4|CD276', 'ENSG00000103855|ENST00000318443|CD276'] 60185 16751 LGPGLELAP True PC9_epitope_Rep4 865.4909186266099 865.48982993586 72.4 2 -0.25433152963894756 0.06565294841422878 0.7114542141319158 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 76372 6651 NQADKAINTAV True PC9_epitope_Rep4 1143.5884008217502 1143.58730993586 32.752 2 -0.25433738927518146 0.06565294841422878 0.711461653076239 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 107598 17395 SVPNKDVFQEL True PC9_epitope_Rep2 1274.65066672514 1274.6495699358602 72.17 2 -0.25437415039424477 0.06566890092737122 0.7115083139047671 ['ENSG00000115919|ENST00000264170|KYNU'] 45026 18040 IPFGITEEA True PC9_epitope_Rep6 975.49131254943 975.49020993586 82.023 2 -0.2544892985708251 0.06566890092737122 0.711654379195874 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 116729 17200 TVDKQNISL True PC9_epitope_Rep3 1016.5502244078799 1016.54912993586 71.316 2 -0.2545510210566418 0.06570321538094276 0.711732616751543 ['ENSG00000116031|ENST00000410009|CD207'] 69881 17013 LVIFQVTGI True PC9_epitope_Rep4 988.5957180483199 988.59462993586 73.433 2 -0.2545991394000069 0.06570321538094276 0.711793582432935 ['nc|ENSG00000163513|P37173-2|TGFBR2', 'ENSG00000163513|ENST00000295754|TGFBR2'] 57208 21347 LDVSCRKTVLK True PC9_epitope_Rep2 1260.72239219676 1260.72128993586 87.578 2 -0.25473780699158133 0.06581218553747842 0.7119691383301147 ['HJURP|p.G352V|1|0.08|ENSG00000123485|chr2:233841725-233841725|C/A|missense_variant'] 98126 9933 SESKRREQW True NCI_RA007_Epitope_Rep1 1204.5948831845199 1204.59378993586 42.641 2 -0.25485797303683705 0.0658795879771588 0.7121211091982321 ['ENST00000372242.7_1_1:45101133-45101517:-|nuORF'] 79955 23490 PESVRRPWEKN True PC9_epitope_Rep1 1396.7211463267997 1396.72004993586 95.14 2 -0.25486800603538406 0.0658795879771588 0.7121337909021513 ['ENST00000588273.1_1_19:46027302-46029432:+|nuORF', 'ENST00000588463.1_1_19:46027302-46027401:+|nuORF'] 46731 6853 ITEKTC[Carbamidomethyl]RGF True H1975_Epitope_Rep2 1110.54917914149 1110.5480899358602 31.278 2 -0.25491274447676804 0.0658795879771588 0.7121903275970235 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2', 'ENST00000486886.1_1_3:111680917-111693407:+|nuORF'] 110881 16551 TGSFYQSL True PC9_epitope_Rep1 901.4181476091699 901.41704993586 68.486 2 -0.2549194009664434 0.0658795879771588 0.7121987377439999 ['ENST00000584706.1_1_18:678488-685971:-|nuORF'] 2483 7582 AEQLRQMM True H1975_Epitope_Rep2 1005.47357139365 1005.47246993586 34.117 2 -0.25497887677985986 0.0658795879771588 0.7122738622183945 ['ENST00000270502.6_1_19:11040414-11040630:+|nuORF'] 127916 11618 VPGTEPEKDP True H1975_Epitope_Rep2 1067.51350454599 1067.5124099358602 49.756 2 -0.2550654356453896 0.06589673913043478 0.7123831304871165 ['ENSG00000189114|ENST00000433642|BLOC1S3'] 59124 5700 LEYMDRMVGYK True H1975_Epitope_Rep1 1403.65774333487 1403.65609490379 26.992 3 -0.25515688807526477 0.06592861863846662 0.7124984926414294 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant'] 43889 20719 IHVIKPVLP True PC9_epitope_Rep5 1014.6589870112199 1014.65788993586 84.753 2 -0.25516349730099774 0.06592861863846662 0.7125068264941399 ['ENSG00000059588|ENST00000040877|TARBP1'] 118764 13140 VAAAALGEAA True PC9_epitope_Rep5 842.4497820906199 842.44923496793 55.547 1 -0.2551909942680116 0.06592861863846662 0.7125414937914489 ['ENST00000334371.3_1_1:152749031-152749076:+|nuORF'] 65600 9994 LRWEKRWCDLR True NCI_RA007_Epitope_Rep1 1559.8143355189898 1559.81269490379 42.88 3 -0.25522072460821127 0.06592861863846662 0.712578968165683 ['nc|ENSG00000147481|Q9NSN8-2|SNTG1', 'SNTG1|p.S448Rfs*40|1|0.25|ENSG00000147481|chr8:50752060-50752060|C/-|frameshift_variant', 'ENSG00000147481|ENST00000642720|SNTG1'] 105572 5715 SSDKGRLCYY True H1975_Epitope_Rep1 1190.53900810118 1190.53735490379 27.051 3 -0.2552297261597572 0.06594334600062418 0.712590312624617 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 68110 16064 LTDPDIHVL True PC9_epitope_Rep4 1021.5444107514501 1021.54330993586 69.724 2 -0.2552442121363089 0.06594334600062418 0.7126085672498693 ['ENSG00000091157|ENST00000254442|WDR7', 'nc|ENSG00000091157|Q9Y4E6-2|WDR7'] 100238 10410 SIWLSRQKR True PC9_epitope_Rep1 1172.6778249628398 1172.67616490379 44.926 3 -0.25531208730116567 0.06594334600062418 0.7126940722407218 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF'] 55715 19345 LALLAALL True H1975_Epitope_Rep1 796.54222592348 796.54167496793 80.586 1 -0.2553576008405294 0.06596049346453224 0.7127513811828404 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 130636 7374 VSSYQHTSVT True NCI_RA007_Epitope_Rep5 1107.51965255559 1107.5185499358602 35.044 2 -0.25539502941263476 0.06597764029886366 0.7127984940857598 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF', 'ENST00000443317.1_1_20:32801869-32802238:-|nuORF'] 25600 11944 FELTGIPPAPR True H1975_Epitope_Rep1 1196.6553581827598 1196.6542699358602 50.947 2 -0.2554070008325401 0.06599357503441945 0.7128135600137985 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'ENST00000532091.1_1_11:122929265-122929517:-|nuORF', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 20958 5705 EQPTWWDP True H1975_Epitope_Rep2 1057.45051036661 1057.44940993586 26.941 2 -0.25541924325014814 0.06599357503441945 0.7128289654891087 ['ENST00000359943.7_1_7:121004237-121011402:-|nuORF'] 47024 21455 ITREAMLKV True PC9_epitope_Rep1 1059.61105084263 1059.6099499358602 87.367 2 -0.2555408216429125 0.06605851473881282 0.7129818737135721 ['ENSG00000182798|ENST00000400004|MAGEB17'] 73712 12933 MYSDVWKQL True NCI_RA007_Epitope_Rep3 1168.5586809166 1168.55758993586 58.142 2 -0.25555714543654384 0.06605851473881282 0.7130023926718042 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 76589 14260 NQLQQWVNLRR True H1975_Epitope_Rep1 1453.79022894613 1453.78912993586 60.035 2 -0.2555759160594593 0.06605851473881282 0.7130259839714247 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 7045 8927 AQQIQKVIL True NCI_RA007_Epitope_Rep4 1039.6389798426299 1039.6378899358601 41.173 2 -0.25563889539586643 0.06605851473881282 0.7131051118000471 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF'] 113541 9475 TLTQNLLI True NCI_RA007_Epitope_Rep5 914.5436824754598 914.54258993586 43.079 2 -0.2556512421706495 0.06605851473881282 0.7131206197347617 ['ITGA5|p.T573N|1|0.18|ENSG00000161638|chr12:54403683-54403683|G/T|missense_variant'] 27058 7587 FLFKAGGG True NCI_RA007_Epitope_Rep3 795.4279244472298 795.42682993586 36.976 2 -0.25570075510932416 0.06605851473881282 0.7131827941819258 ['TMEM182|p.Y146F|1|0.1|ENSG00000170417|chr2:102797968-102797968|A/T|missense_variant'] 100276 9233 SIYRELAV True PC9_epitope_Rep6 949.5232813840498 949.52218993586 45.661 2 -0.25571166857035044 0.06605851473881282 0.7131964951446044 ['ENST00000606714.5_1_6:52442273-52442435:+|nuORF'] 18213 14472 EIMSRPERL True PC9_epitope_Rep2 1129.5913780272099 1129.59028993586 60.937 2 -0.2557378470975365 0.06607444387343073 0.7132293553002712 ['ENSG00000171487|ENST00000390649|NLRP5', 'NLRP5|p.P424Lfs*6|1|0.54|ENSG00000171487|chr19:56027500-56027501|-/CC|frameshift_variant'] 12944 9753 DLLANSSDPD True H1975_Epitope_Rep2 1045.4563835926901 1045.45528993586 42.503 2 -0.25574217079386635 0.06607444387343073 0.7132347818881513 ['nc|ENSG00000164463|Q8IUR6-2|CREBRF', 'ENST00000520464.1_1_5:172507634-172535847:+|nuORF', 'ENSG00000164463|ENST00000296953|CREBRF', 'nc|ENSG00000164463|Q8IUR6-3|CREBRF'] 84885 7370 QEAPPVPGA True H1975_Epitope_Rep2 864.4341320264798 864.4335849679301 33.288 1 -0.2558248409073932 0.06610629863456174 0.7133385036623753 ['ENST00000496125.2_2_19:45596475-45612027:+|nuORF', 'ENSG00000104866|ENST00000221462|PPP1R37'] 960 14714 ADSEALFGVP True NCI_RA007_Epitope_Rep5 1004.4814761417199 1004.48097496793 63.27 1 -0.2558356091132391 0.06610629863456174 0.7133520089402108 ['ENSG00000173214|ENST00000671876|MFSD4B'] 14940 16694 DYESGHIAF True PC9_epitope_Rep2 1037.4454249861699 1037.4443299358602 69.461 2 -0.25584703546455023 0.06610629863456174 0.7133663383893493 ['ENSG00000184108|ENST00000332517|TRIML1'] 509 5422 AAPAEEPAAAA True PC9_epitope_Rep6 967.4610750503098 967.45996993586 28.766 2 -0.25591496520555496 0.06610629863456174 0.7134515002720384 ['ENSG00000277443|ENST00000612661|MARCKS'] 9733 14861 AYGSAVLTF True NCI_RA007_Epitope_Rep5 927.47018318203 927.46908993586 63.832 2 -0.255966418684356 0.06611858403831684 0.7135159757811202 ['nc|ENSG00000179698|A6NE52-2|WDR97', 'ENSG00000179698|ENST00000323662|WDR97'] 60589 3295 LHGSEFNRHQK True NCI_RA007_Epitope_Rep2 1351.67453048755 1351.67287490379 17.481 3 -0.2560045476511251 0.06611858403831684 0.7135637376507646 ['ENSG00000197863|ENST00000356725|ZNF790'] 76269 6290 NPKEFYHEV True PC9_epitope_Rep6 1161.54547338061 1161.54382490379 32.71 3 -0.25600673556388165 0.06611858403831684 0.7135664778816287 ['ENSG00000174231|ENST00000304992|PRPF8'] 19628 14551 ELQSGEYWVDP True H1975_Epitope_Rep2 1321.58264673497 1321.58154993586 61.126 2 -0.25603563855138417 0.06611858403831684 0.713602672718319 ['CON__P04258'] 102463 8476 SLVCSFFHVP True NCI_RA007_Epitope_Rep2 1134.55320161334 1134.55210993586 37.614 2 -0.2560366222592666 0.06611858403831684 0.7136039044577666 ['ENST00000013070.10_1_14:93693825-93693894:+|nuORF'] 44887 21715 INLEELETL True PC9_epitope_Rep3 1072.56520576568 1072.5641099358602 88.82 2 -0.25608502961986185 0.06614557531054475 0.71366450542932 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant'] 3048 21841 AFSFIIAEI True NCI_RA007_Epitope_Rep5 1009.5484335027298 1009.54787496793 91.14 1 -0.25608996437408904 0.06614557531054475 0.7136706819298672 ['ENSG00000006116|ENST00000005284|CACNG3'] 30675 18846 GALAQERRF True PC9_epitope_Rep3 1046.5621265042598 1046.56102993586 77.713 2 -0.2560994199095077 0.06614557531054475 0.7136825161185558 ['SIGLEC6|p.P281Lfs*4|1|0.13|ENSG00000105492|chr19:51529894-51529894|G/-|frameshift_variant', 'nc|ENSG00000105492|O43699-4|SIGLEC6', 'nc|ENSG00000105492|O43699-2|SIGLEC6', 'nc|ENSG00000105492|O43699-5|SIGLEC6', 'SIGLEC6|p.T404Kfs*3|1|0.07|ENSG00000105492|chr19:51520233-51520233|G/-|frameshift_variant', 'ENST00000489837.1_1_19:52032900-52035046:-|nuORF', 'nc|ENSG00000105492|O43699-3|SIGLEC6', 'ENSG00000105492|ENST00000425629|SIGLEC6'] 110994 8393 THASEIAI True PC9_epitope_Rep2 840.4341320264799 840.43302993586 37.656 2 -0.256145358740246 0.06614557531054475 0.7137399988899578 ['OR2D2|p.M197I|1|0.2|ENSG00000166368|chr11:6891910-6891910|C/T|missense_variant'] 102312 11171 SLSQNPSL True PC9_epitope_Rep1 844.42904664604 844.4279499358599 47.854 2 -0.2561905437157156 0.06614557531054475 0.7137965181362191 ['ENST00000595638.1_1_19:51485457-51485655:-|nuORF'] 24407 14322 FACHIGNYSL True PC9_epitope_Rep1 1123.51206507735 1123.5109699358602 59.913 2 -0.25623227520365416 0.06614557531054475 0.7138486998245379 ['ENST00000464101.2_1_3:132379321-132384968:+|nuORF'] 68453 14336 LTFAAFNLTV True PC9_epitope_Rep6 1095.5964463243101 1095.5953499358602 67.042 2 -0.2562986542836855 0.06614557531054475 0.7139316661104326 ['ENSG00000130943|ENST00000253255|PKDREJ'] 107982 10195 SWFWFRLYWFP True NCI_RA007_Epitope_Rep5 1633.7870410586497 1633.78540490379 45.847 3 -0.25632076589901476 0.06614557531054475 0.7139592935494444 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 28851 3219 FTATCAGR True NCI_RA007_Epitope_Rep2 825.3803226318098 825.3792299358599 17.172 2 -0.25654949394895815 0.06619819092527017 0.714244799550559 ['ENST00000500813.6_1_4:183812171-183812324:-|nuORF'] 131566 8515 VTLGGTSVTV True PC9_epitope_Rep4 932.5178616504401 932.51676993586 40.228 2 -0.2565666921170607 0.06619819092527017 0.7142662463812932 ['ENSG00000177150|ENST00000651643|FAM210A'] 27128 19519 FLISLYTILTY True NCI_RA007_Epitope_Rep2 1345.7533408885301 1345.7522499358602 80.863 2 -0.25672020940807627 0.06625201820049904 0.7144575625229505 ['ENSG00000123983|ENST00000357430|ACSL3'] 57256 7433 LDWYSWVP True NCI_RA007_Epitope_Rep2 1064.49673228304 1064.49562993586 33.539 2 -0.2567738789339691 0.06626793380545261 0.7145243930782091 ['nc|ENSG00000161905|P16050-2|ALOX15', 'ENSG00000161905|ENST00000293761|ALOX15'] 43095 12000 IEWDKPPVP True NCI_RA007_Epitope_Rep4 1079.56514619603 1079.56404993586 53.162 2 -0.2568133457409567 0.06626793380545261 0.7145735204768385 ['ENSG00000154447|ENST00000284637|SH3RF1', 'SH3RF1|p.S448Cfs*15|1|0.21|ENSG00000154447|chr4:169122103-169122104|CT/-|frameshift_variant', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 101750 11957 SLNLRFHHKDL True PC9_epitope_Rep3 1378.74696715182 1378.74532490379 51.015 3 -0.2569393822520653 0.06634010310602308 0.714730308357086 ['ENST00000356245.7_1_5:151178821-151179531:+|nuORF'] 63690 23026 LMVMRRLL True PC9_epitope_Rep1 1030.6143624012598 1030.6132699358602 93.369 2 -0.2570658432345463 0.06635479728490186 0.7148874725209395 ['ENST00000430945.5_1_9:94907296-94910408:+|nuORF'] 13643 7248 DPNEPQKPLSA True H1975_Epitope_Rep1 1194.5880664685799 1194.58696993586 32.889 2 -0.25707838487942136 0.06635479728490186 0.7149030508702227 ['TOX|p.V265L|1|0.13|ENSG00000198846|chr8:58838212-58838212|C/A|missense_variant'] 80835 7057 PHQPFSQAV True PC9_epitope_Rep4 1009.4981292653699 1009.49702993586 34.407 2 -0.25722465330881034 0.06635479728490186 0.7150846257019238 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 17929 12426 EIAQDFKTDLR True PC9_epitope_Rep3 1334.68302948258 1334.6813849037899 52.823 3 -0.25730542250471566 0.06636948984645864 0.7151848048745781 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 41713 19513 IAKNSYNDALL True PC9_epitope_Rep2 1220.6401020414398 1220.63900993586 80.44 2 -0.2573095684191512 0.06636948984645864 0.7151899454620954 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 141218 9589 YTAESHTTL True NCI_RA007_Epitope_Rep3 1021.4716397340101 1021.47054993586 44.804 2 -0.2574012769862074 0.06636948984645864 0.715303615363319 ['ENST00000407073.5_2_2:148990944-149215877:+|nuORF'] 122342 11894 VGDEDFVHL True NCI_RA007_Epitope_Rep4 1029.47672511445 1029.47562993586 52.749 2 -0.25740766272033183 0.06638539851417041 0.7153115273596327 ['ENSG00000160213|ENST00000291568|CSTB'] 18829 8669 ELDPDNETY True H1975_Epitope_Rep2 1094.44039917538 1094.4398749679299 38.305 1 -0.2574613364343272 0.06638539851417041 0.7153780146931937 ['ENSG00000104969|ENST00000221566|SGTA'] 11810 5454 DHFASVHSV True PC9_epitope_Rep6 997.46174375665 997.46064993586 28.907 2 -0.25750773863181603 0.06641599413059428 0.7154354729926584 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 92028 24141 RKRRTVHINLL True PC9_epitope_Rep4 1404.8789843808797 1404.8778899358601 101.34 2 -0.25751074385212064 0.06641599413059428 0.7154391935682938 ['ENST00000494079.1_2_7:92205125-92206979:-|nuORF'] 80802 16963 PHLQFYHP True NCI_RA007_Epitope_Rep4 1037.50830002625 1037.5072099358601 73.515 2 -0.2575228342875899 0.06641599413059428 0.7154541611356741 ['ENSG00000139044|ENST00000266383|B4GALNT3'] 11283 11311 DEHKQQGELY True H1975_Epitope_Rep2 1245.56257999673 1245.5614899358602 48.555 2 -0.25761129918364983 0.06641599413059428 0.7155636366431587 ['ENSG00000197943|ENST00000564138|PLCG2', 'ENST00000567980.5_1_16:81819579-81955027:+|nuORF'] 64612 20865 LPSSPIYASV True PC9_epitope_Rep2 1032.54916177872 1032.5480699358602 85.703 2 -0.2576257075560951 0.06641599413059428 0.7155814601885085 ['nc|ENSG00000095397|Q9P202-3|WHRN', 'nc|ENSG00000095397|Q9P202-4|WHRN', 'ENSG00000095397|ENST00000362057|WHRN'] 37248 18433 GVRKRRVRP True PC9_epitope_Rep1 1122.7210271874999 1122.71938490379 75.693 3 -0.2576527860542945 0.0664318990499248 0.7156149518410716 ['ENST00000416255.5_1_2:101179854-101179926:+|nuORF'] 104563 5262 SQQEHRNMENK True NCI_RA007_Epitope_Rep3 1399.6262599657896 1399.62460490379 27.702 3 -0.2576644541918518 0.0664318990499248 0.7156293813268212 ['ENSG00000198707|ENST00000552810|CEP290'] 117712 20103 TVVAPEQNL True PC9_epitope_Rep2 969.5131106231701 969.51200993586 82.734 2 -0.2577233859894976 0.06643927307403129 0.7157022406140419 ['nc|ENSG00000118733|Q96PB7-4|OLFM3', 'nc|ENSG00000118733|Q96PB7-2|OLFM3', 'OLFM3|p.G402Wfs*27|1|0.2|ENSG00000118733|chr1:101804471-101804472|-/A|frameshift_variant', 'ENSG00000118733|ENST00000370103|OLFM3', 'nc|ENSG00000118733|Q96PB7|OLFM3'] 138743 21100 YIRRVHNL True PC9_epitope_Rep5 1069.61449643029 1069.6133899358601 86.226 2 -0.2577421635984585 0.06643927307403129 0.7157254492747983 ['ENSG00000155561|ENST00000285968|NUP205'] 81620 24351 PLLFLSQLL True PC9_epitope_Rep1 1042.64266824074 1042.6415699358602 98.495 2 -0.25774267568948983 0.06643927307403129 0.7157260821613284 ['ENST00000407418.7_1_22:39259662-39259899:-|nuORF'] 92027 24883 RKRRTVHINLL True PC9_epitope_Rep2 1404.8789843808797 1404.8778899358601 101.39 2 -0.2577470851997562 0.06643927307403129 0.715731531717163 ['ENST00000494079.1_2_7:92205125-92206979:-|nuORF'] 58876 10618 LETADGEPEP True H1975_Epitope_Rep1 1056.46113461996 1056.4600299358601 45.799 2 -0.2577875064878978 0.06643927307403129 0.7157814786320073 ['ENSG00000169006|ENST00000306928|NTSR2'] 75338 19316 NIPVHLPNI True PC9_epitope_Rep2 1015.58146496651 1015.58036993586 79.673 2 -0.2577903204045738 0.06643927307403129 0.7157849551151674 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 73979 9365 NCYKEINSQ True H1975_Epitope_Rep1 1097.4811588718899 1097.48006993586 40.929 2 -0.2578464025910699 0.06643927307403129 0.715854227336982 ['ENSG00000139985|ENST00000603540|ADAM21', 'ENST00000529267.2_1_14:70712472-70713909:-|nuORF'] 34109 22155 GMEAALLNV True PC9_epitope_Rep2 916.46880328304 916.46770993586 90.705 2 -0.2579144240505978 0.06643927307403129 0.7159382083009171 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000598424.5_1_19:17597384-17597952:+|nuORF'] 88144 6021 QRSQTQTIL True PC9_epitope_Rep4 1073.58292151849 1073.58182993586 30.14 2 -0.25794212646670533 0.06643927307403129 0.7159723983042842 ['ENSG00000164151|ENST00000296564|ICE1'] 126884 11330 VLQLKQDI True PC9_epitope_Rep5 955.57023157647 955.56912993586 48.575 2 -0.2579907568601836 0.06649306829017824 0.7160324005037096 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-2|EPB41L5'] 19065 6021 ELFVREPP True H1975_Epitope_Rep3 985.5232813840498 985.52218993586 28.172 2 -0.2580063737161748 0.06650896688304545 0.7160516646750694 ['nc|ENSG00000196091|Q00872-5|MYBPC1', 'nc|ENSG00000196091|Q00872-3|MYBPC1', 'nc|ENSG00000196091|Q00872-9|MYBPC1', 'nc|ENSG00000196091|Q00872-8|MYBPC1', 'nc|ENSG00000196091|Q00872-7|MYBPC1', 'nc|ENSG00000196091|Q00872-10|MYBPC1', 'nc|ENSG00000196091|Q00872-2|MYBPC1', 'ENSG00000196091|ENST00000361466|MYBPC1', 'nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 101954 11754 SLQEEWIPFRR True NCI_RA007_Epitope_Rep1 1459.7571974823497 1459.7561099358602 49.698 2 -0.25803917105118107 0.06650896688304545 0.7160921146280232 ['ENSG00000158006|ENST00000374282|PAFAH2'] 57620 10156 LEEDTYTGTV True H1975_Epitope_Rep2 1126.50299943194 1126.50190993586 44.065 2 -0.25806873275546854 0.06654442101402769 0.7161285656336492 ['ENSG00000138792|ENST00000265162|ENPEP'] 72979 17204 MQLEDLKQQL True PC9_epitope_Rep4 1244.64347316972 1244.6423699358602 74.181 2 -0.25812972600669004 0.066576211518363 0.7162037482938439 ['nc|ENSG00000269335|Q9Y6K9-2|IKBKG', 'ENSG00000269335|ENST00000594239|IKBKG'] 36168 16825 GVATLGALL True H1975_Epitope_Rep1 813.4960040070499 813.4954549679301 70.127 1 -0.25814753699199267 0.066576211518363 0.7162256964772453 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 93892 11005 RRFKWAIEL True NCI_RA007_Epitope_Rep1 1217.7033114346898 1217.70166490379 46.8 3 -0.2581575056594884 0.066576211518363 0.7162379794542166 ['nc|ENSG00000128463|Q5J8M3-3|EMC4', 'ENST00000557941.1_1_15:34517315-34518058:+|nuORF', 'nc|ENSG00000128463|Q5J8M3-2|EMC4', 'ENSG00000128463|ENST00000267750|EMC4'] 59126 7112 LEYQGKYILK True NCI_RA007_Epitope_Rep1 1253.7019740220096 1253.70031490379 31.655 3 -0.2581692994057164 0.066576211518363 0.7162525100616443 ['ENSG00000121879|ENST00000263967|PIK3CA'] 6544 12536 APTPGLLQ True PC9_epitope_Rep4 795.4490538146299 795.44794993586 56.039 2 -0.2582137702066764 0.0665933259992666 0.7163072895195689 ['ENSG00000021762|ENST00000263650|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5', 'ENST00000498536.5_1_11:3109437-3111932:-|nuORF'] 57773 14167 LEEQLTTDEIL True PC9_epitope_Rep6 1302.6554773220598 1302.65438993586 66.365 2 -0.2582640768199404 0.06661043985258797 0.7163692361639267 ['nc|ENSG00000105607|Q92947-2|GCDH', 'ENSG00000105607|ENST00000222214|GCDH', 'ENST00000590627.5_1_19:13002616-13004571:+|nuORF', 'ENST00000585420.5_1_19:13002616-13007066:+|nuORF', 'ENST00000587832.5_1_19:13002118-13004571:+|nuORF', 'ENST00000421816.6_1_19:13002118-13008243:+|nuORF', 'ENST00000591043.1_1_19:13002118-13008243:+|nuORF'] 115343 11627 TRIGLINDM-[Oxidation] True PC9_epitope_Rep2 1047.53828020563 1047.5371899358602 50.049 2 -0.2583091074331204 0.06662633151825166 0.7164246668018683 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 30274 21174 GAAAFFTAV True PC9_epitope_Rep3 853.4334037504899 853.4328549679301 86.733 1 -0.2583243667970882 0.06662633151825166 0.7164434462700634 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 3577 8436 AGLYKENLLL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64810993586 40.268 2 -0.25834177806977104 0.06664222201851681 0.7164648715182887 ['ENSG00000206190|ENST00000555815|ATP10A'] 26650 20398 FIQKYLSL True PC9_epitope_Rep3 1010.58006798418 1010.57896993586 83.712 2 -0.2583436773408163 0.06664222201851681 0.7164672084814067 ['ENST00000433866.6_1_16:83845533-83845581:+|nuORF'] 133419 11326 VVVSKGLTI True PC9_epitope_Rep5 914.5800679841799 914.57896993586 48.56 2 -0.2584844576819264 0.06671433285667143 0.716640342532438 ['ENST00000477132.1_1_2:37544174-37551396:-|nuORF'] 110135 3796 TEMSWWRTSR True NCI_RA007_Epitope_Rep2 1338.61390437694 1338.61225490379 19.401 3 -0.25854696342846895 0.06672410316572874 0.7167171566456485 ['ENST00000589707.5_1_19:44732617-44732743:+|nuORF', 'ENST00000588219.5_1_19:44732617-44738899:+|nuORF'] 79122 5130 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 26.395 2 -0.25857308039481 0.06672410316572874 0.7167492418402208 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 79962 20585 PETLKFTSI True PC9_epitope_Rep4 1034.56481184286 1034.56370993586 87.332 2 -0.2585898877257757 0.06672410316572874 0.716769886766594 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant'] 60131 19872 LGMEHCDTL True PC9_epitope_Rep3 1017.4259524948899 1017.42484993586 81.674 2 -0.25861256167316254 0.06672410316572874 0.7167977338538674 ['ENSG00000130176|ENST00000252456|CNN1', 'nc|ENSG00000130176|P51911-2|CNN1'] 12322 6460 DIQEQELQSKE True NCI_RA007_Epitope_Rep1 1345.63613885981 1345.63450490379 29.15 3 -0.2586163057948831 0.06672410316572874 0.7168023317711774 ['FGD2|p.E446K|1|0.22|ENSG00000146192|chr6:37022248-37022248|G/A|missense_variant'] 25409 12214 FEDENFILK True NCI_RA007_Epitope_Rep2 1153.5655401188499 1153.5649749679299 52.108 1 -0.2587032771237479 0.06672410316572874 0.7169091007410564 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 41770 10582 IAPVLPHTA True PC9_epitope_Rep2 917.5334521449302 917.53234993586 46.021 2 -0.25871167156126296 0.06672410316572874 0.7169194024918142 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 44807 15291 IMVQEERRL True PC9_epitope_Rep5 1172.6335771923598 1172.63194490379 63.826 3 -0.2587321242976016 0.06673998716891211 0.7169444997137885 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000469599.6_1_Y:21877495-21878275:-|nuORF', 'ENST00000465402.1_1_X:53230656-53239709:-|nuORF', 'ENST00000492117.1_1_Y:21877982-21883284:-|nuORF', 'ENST00000481369.1_1_X:53230656-53231176:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 88723 18474 QTIALITYL True H1975_Epitope_Rep1 1034.60119735158 1034.60067496793 77.016 1 -0.25876253550080947 0.06673998716891211 0.7169818099624317 ['ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 11633 10400 DGIVNENLVQ True H1975_Epitope_Rep1 1099.55095268387 1099.54984993586 44.953 2 -0.25881595540230895 0.06677419946111407 0.7170473288213266 ['RRM2|p.E147Q|1|0.1|ENSG00000171848|chr2:10124720-10124720|G/C|missense_variant'] 136145 13125 WRREFWWSLT True PC9_epitope_Rep5 1465.7255034312498 1465.72384490379 55.49 3 -0.258886903758343 0.06677419946111407 0.7171343071160547 ['nc|ENSG00000133816|O94851|MICAL2'] 101728 6566 SLNHEWTFEKL True NCI_RA007_Epitope_Rep1 1402.6881148630198 1402.68646490379 29.554 3 -0.2589528294745868 0.06678518409911478 0.7172150881249533 ['ENSG00000171492|ENST00000337338|LRRC8D'] 101661 7660 SLLTSTVP True H1975_Epitope_Rep2 816.45928414516 816.45818993586 34.419 2 -0.2589655841856035 0.06678518409911478 0.7172307124765355 ['ENST00000252445.7_1_19:11663878-11664130:-|nuORF'] 3170 6697 AGDVAAVLG True NCI_RA007_Epitope_Rep2 771.41266830591 771.41211496793 30.662 1 -0.2589806428143909 0.06678518409911478 0.7172491572501477 ['ENSG00000259431|ENST00000288014|THTPA'] 98090 13420 SERRCRAP True H1975_Epitope_Rep2 973.4875816650098 973.48648993586 56.755 2 -0.25900355487577026 0.06678518409911478 0.7172772175766201 ['ENSG00000198542|ENST00000376180|ITGBL1'] 119422 14835 VAQLKQLQAET True PC9_epitope_Rep1 1227.6823012065897 1227.6812099358601 61.882 2 -0.2590080164516372 0.06678518409911478 0.7172826811157741 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 64698 20550 LPVSPSLLPV True PC9_epitope_Rep3 1020.62193279616 1020.62082993586 84.309 2 -0.2590339409924646 0.06678518409911478 0.7173144242184607 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 90005 7707 RDQEEERRERW True NCI_RA007_Epitope_Rep3 1587.7502146089496 1587.7491099358601 37.437 2 -0.25908636950022323 0.06680228722234441 0.7173786018093367 ['ENSG00000159450|ENST00000614923|TCHH'] 108625 10799 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 46.425 3 -0.2591595923976221 0.06683159245006413 0.7174681932775724 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 24040 10091 EYNNNFHVL True NCI_RA007_Epitope_Rep3 1148.5250722892001 1148.5239699358601 46.784 2 -0.25917618552382116 0.06683159245006413 0.7174884891534379 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 91228 9617 RGGEVYGL True PC9_epitope_Rep2 849.4344663796498 849.43391496793 42.333 1 -0.2591795479527274 0.06683159245006413 0.7174926016122481 ['ENST00000433861.6_2_3:9773506-9775843:+|nuORF', 'ENST00000420291.1_1_3:9773506-9774924:+|nuORF'] 102410 13300 SLTLLQSNT True PC9_epitope_Rep1 975.52367530687 975.52256993586 56.022 2 -0.2592259952914749 0.06683159245006413 0.7175493994237031 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'nc|ENSG00000166473|Q7Z442-4|PKD1L2', 'ENST00000299598.11_1_16:81199358-81222588:-|nuORF', 'nc|ENSG00000166473|Q7Z442-3|PKD1L2', 'ENST00000533478.5_1_16:81174978-81214887:-|nuORF', 'nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 79564 7147 PDEVARRWGER True NCI_RA007_Epitope_Rep2 1369.6850951712497 1369.68343490379 32.422 3 -0.25923140213784013 0.06683159245006413 0.7175560099179747 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENST00000528790.1_1_11:128676959-128680880:+|nuORF', 'nc|ENSG00000151702|Q01543-4|FLI1', 'nc|ENSG00000151702|Q01543-2|FLI1', 'FLI1|p.Y358Tfs*41|1|0.43|ENSG00000151702|chr11:128810700-128810700|T/-|frameshift_variant', 'nc|ENSG00000151702|Q01543-3|FLI1', 'FLI1|p.S406Ifs*36|1|0.1|ENSG00000151702|chr11:128810843-128810844|-/A|frameshift_variant', 'ENSG00000151702|ENST00000527786|FLI1'] 101662 7253 SLLTSTVP True H1975_Epitope_Rep3 816.45928414516 816.45818993586 32.871 2 -0.25928135132044705 0.06683159245006413 0.7176170664313625 ['ENST00000252445.7_1_19:11663878-11664130:-|nuORF'] 5344 20564 ALRPLIPAL True PC9_epitope_Rep2 962.6276868829399 962.62658993586 84.533 2 -0.25931283697601226 0.06686701728024042 0.7176555423897658 ['ENST00000506004.5_1_5:141348908-141349118:+|nuORF'] 99674 6668 SIGNAQKVP True H1975_Epitope_Rep3 912.5028802926399 912.50178993586 30.603 2 -0.25933798845048195 0.06688411639668694 0.7176862716372477 ['ENST00000504327.1_1_3:98501668-98501887:+|nuORF'] 33572 5694 GLETYLGP True H1975_Epitope_Rep3 848.4279840168799 848.42688993586 26.932 2 -0.259352978912085 0.06690121488648233 0.7177045838557564 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2'] 31011 6360 GASNLKEHNFP True NCI_RA007_Epitope_Rep1 1212.58873517492 1212.5876299358601 28.765 2 -0.2593847833135828 0.06691095639428363 0.7177434293204008 ['ENST00000344120.4_1_5:141692654-141692750:-|nuORF'] 128577 18697 VPTLVTPSA True PC9_epitope_Rep4 883.50148331031 883.50038993586 79.998 2 -0.259397963406507 0.06691095639428363 0.7177595247115257 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 86767 22514 QLLNWVYLSL True PC9_epitope_Rep1 1247.69140933831 1247.6903099358601 91.402 2 -0.2594050319532406 0.06691095639428363 0.7177681561201921 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 141978 8224 YVIRDEVEK True H1975_Epitope_Rep1 1149.6029882567298 1149.60188993586 36.577 2 -0.2594528719634508 0.06691095639428363 0.7178265621071243 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48'] 23776 20961 EYGSIIAFF True NCI_RA007_Epitope_Rep5 1045.51204799401 1045.5114749679299 87.634 1 -0.25945541242527953 0.06691095639428363 0.7178296630973123 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 10905 5311 DAAEARDP True H1975_Epitope_Rep2 843.3722600459099 843.3711699358599 25.48 2 -0.2594746677163556 0.06691095639428363 0.7178531650476585 ['BEST2|p.A345D|1|0.34|ENSG00000039987|chr19:12756226-12756226|C/A|missense_variant'] 132669 17596 VVGGIYGV True PC9_epitope_Rep1 762.42759009406 762.4270449679301 72.476 1 -0.2594889077528559 0.06691095639428363 0.7178705435691222 ['ENSG00000167658|ENST00000309311|EEF2'] 97875 8871 SELRAFVA True H1975_Epitope_Rep3 891.4814165720699 891.48030993586 39.125 2 -0.2595158361240667 0.0669280518861875 0.7179034020736412 ['ENSG00000118655|ENST00000650450|DCLRE1B', 'ENST00000466480.1_1_1:114448336-114454776:+|nuORF'] 2699 20174 AESYQEILI True PC9_epitope_Rep6 1064.5389910178399 1064.5378899358602 90.272 2 -0.25954960678263633 0.06693901478373972 0.7179446007135767 ['ENST00000401788.2_1_6:27978946-27979378:+|nuORF'] 132589 10227 VVESTGVF True NCI_RA007_Epitope_Rep4 836.4279840168799 836.42743496793 46.193 1 -0.2595962657395543 0.06693901478373972 0.7180015061017648 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6645960-6646242:+|nuORF', 'ENST00000425487.2_1_X:46299833-46299950:-|nuORF'] 83976 19254 PVSHPVLTL True PC9_epitope_Rep1 961.55966689277 961.55856993586 78.86 2 -0.25963704713157976 0.06693901478373972 0.7180512276434649 ['FCRL5|p.H721Qfs*8|1|0.22|ENSG00000143297|chr1:157524355-157524356|-/T|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.G523Efs*9|1|0.09|ENSG00000143297|chr1:157534727-157534727|C/-|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-4|FCRL5', 'ENST00000449287.1_1_1:157606263-157609923:-|nuORF'] 27642 6793 FPERRYFYWYT True NCI_RA007_Epitope_Rep2 1626.7619485096197 1626.76030490379 31.039 3 -0.2596513093999784 0.06693901478373972 0.7180686130829219 ['nc|ENSG00000078549|P41586-5|ADCYAP1R1', 'nc|ENSG00000078549|P41586-3|ADCYAP1R1', 'ENSG00000078549|ENST00000304166|ADCYAP1R1', 'nc|ENSG00000078549|P41586-4|ADCYAP1R1', 'nc|ENSG00000078549|P41586-2|ADCYAP1R1'] 12423 20953 DITYFIQQL True H1975_Epitope_Rep1 1139.58627556343 1139.5851699358602 87.042 2 -0.259659907439581 0.06693901478373972 0.7180790930765701 ['ENSG00000106526|ENST00000683684|ACTR3C', 'ENST00000415792.5_1_2:114670765-114697700:+|nuORF', 'nc|ENSG00000133627|Q9P1U1-3|ACTR3B', 'ENSG00000115091|ENST00000263238|ACTR3', 'nc|ENSG00000133627|Q9P1U1-2|ACTR3B', 'ENSG00000133627|ENST00000256001|ACTR3B'] 137190 12290 YAYDGKDYLA True PC9_epitope_Rep4 1177.5291546101298 1177.52804993586 55.09 2 -0.2596743949997739 0.06693901478373972 0.7180967502424569 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'HLA-G|p.K200Rfs*14|1|0.15|ENSG00000204632|chr6:29828794-29828794|G/-|frameshift_variant', 'nc|ENSG00000204632|P17693-4|HLA-G'] 47278 9476 IVDHIHFQY True H1975_Epitope_Rep2 1170.5821932425 1170.58054490379 41.418 3 -0.25969339229303856 0.06695365451547902 0.7181199010157262 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8'] 121600 23626 VFFLIVVICK True H1975_Epitope_Rep1 1179.70897397875 1179.70732490379 98.114 3 -0.2597254810521766 0.06695365451547902 0.7181589983754095 ['ENSG00000134294|ENST00000256689|SLC38A2', 'nc|ENSG00000134294|Q96QD8-2|SLC38A2'] 60196 21791 LGPKVLLFL True PC9_epitope_Rep2 998.6528390016199 998.65174993586 89.29 2 -0.2597549264766122 0.06695365451547902 0.7181948671773004 ['ENST00000538107.5_1_12:8804361-8814700:-|nuORF', 'ENST00000537128.1_1_12:8806991-8814700:-|nuORF', 'ENST00000534833.5_1_12:8803096-8814700:-|nuORF', 'nc|ENSG00000197614|Q13361-2|MFAP5', 'ENSG00000197614|ENST00000359478|MFAP5'] 96528 11435 SADRGLVL True PC9_epitope_Rep2 829.46576650793 829.46466993586 49.306 2 -0.2597896845633293 0.06698170229133468 0.7182371978677414 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 93223 5344 RPREALSTNEC True PC9_epitope_Rep1 1274.6037336160598 1274.60209490379 25.395 3 -0.2597978102640049 0.06698170229133468 0.7182470923670968 ['ENSG00000018510|ENST00000264167|AGPS'] 111537 16410 TIAEVKRRLSP True H1975_Epitope_Rep2 1268.75646920636 1268.75536993586 68.342 2 -0.25981206377136157 0.06698170229133468 0.7182644471849573 ['ENSG00000008197|ENST00000008391|TFAP2D'] 24739 5587 FAQHGTFE True NCI_RA007_Epitope_Rep4 935.4137309350699 935.41262993586 28.091 2 -0.2598150543892588 0.06698170229133468 0.7182680882842062 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 88940 8907 QVGPEAGMQKV True PC9_epitope_Rep3 1142.5753936099 1142.5742899358602 39.212 2 -0.2598398149220592 0.06698170229133468 0.7182982314297239 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 39041 4803 HHSGAKVVL True PC9_epitope_Rep3 946.53484912726 946.53374993586 23.571 2 -0.25986343139268675 0.06698170229133468 0.718326976847451 ['ENSG00000135624|ENST00000258091|CCT7', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000479109.2_1_5:92225632-92225905:-|nuORF', 'nc|ENSG00000135624|Q99832-2|CCT7'] 53354 17424 KQQQQLVL True PC9_epitope_Rep2 983.5763795860697 983.57528993586 72.275 2 -0.259883606653359 0.06698170229133468 0.7183515298692484 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 47008 12231 ITQTNNQLI True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 52.076 2 -0.2599725306411355 0.06699020236242102 0.7184597070882379 ['ENSG00000205301|ENST00000511113|MGAT4D'] 121191 7760 VESLELCMSP True H1975_Epitope_Rep3 1106.49878308198 1106.49768993586 34.833 2 -0.25997639928942895 0.06699020236242102 0.718464411794448 ['ENST00000507587.1_1_5:176965994-176980212:-|nuORF'] 29844 16931 FVSLPTPVLPR True NCI_RA007_Epitope_Rep1 1224.7230438197598 1224.72194993586 69.985 2 -0.25999334319548856 0.06699020236242102 0.7184850159393621 ['ENSG00000173988|ENST00000595396|LRRC63'] 15656 10420 EATEWIQDP True H1975_Epitope_Rep2 1087.48220441771 1087.48110993586 45.093 2 -0.2599989963693542 0.06699020236242102 0.7184918897639659 ['ENSG00000134256|ENST00000682167|CD101'] 57314 9380 LEAALGLERAH True NCI_RA007_Epitope_Rep2 1178.6407707477802 1178.6396699358602 41.095 2 -0.26000204579926794 0.06699020236242102 0.7184955975212649 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 43023 9523 IETLRPKSP True H1975_Epitope_Rep1 1039.6025943339098 1039.6014899358602 41.552 2 -0.2600535718658385 0.06699020236242102 0.7185582351392976 ['METTL14|p.R394T|1|0.1|ENSG00000145388|chr4:118710112-118710112|G/C|missense_variant'] 119695 15574 VAVPLYDTL True NCI_RA007_Epitope_Rep4 989.54334812229 989.54279496793 67.656 1 -0.2601365709722132 0.06699020236242102 0.7186590846329232 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 76277 19695 NPLGMPVPAA True PC9_epitope_Rep1 965.5004377644899 965.49934993586 80.582 2 -0.2601651348523481 0.06699020236242102 0.718693777896237 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 48687 11253 KAWEWRYRLYR True H1975_Epitope_Rep3 1625.8579145831297 1625.8568099358602 48.387 2 -0.2602688608276292 0.06702069218091924 0.7188197026969511 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 95847 13937 RYKGPGFEYF True PC9_epitope_Rep6 1262.6084079903396 1262.6067749037902 65.454 3 -0.2602875091724619 0.06702069218091924 0.7188423322106062 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 102115 15751 SLRLQNLV True PC9_epitope_Rep5 941.56581490237 941.56470993586 65.585 2 -0.26029423441910254 0.06702069218091924 0.7188504924709574 ['ENST00000398956.2_1_21:38862623-38862677:+|nuORF'] 33202 5623 GKAAIVEKL True NCI_RA007_Epitope_Rep4 927.57531695691 927.57420993586 28.229 2 -0.2603095599090006 0.06702069218091924 0.7188690866138653 ['ENST00000568233.5_1_16:67899033-67902523:+|nuORF', 'ENST00000551207.2_1_14:36289043-36289391:+|nuORF', 'ENSG00000102898|ENST00000219169|NUTF2', 'CBFB-NUTF2|1|fusion'] 35924 9966 GTSFSAVPP True H1975_Epitope_Rep1 861.4232329896099 861.42212993586 43.271 2 -0.26032152828491645 0.06702069218091924 0.7188836062234749 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'KIAA1549L|p.S237Vfs*6|1|0.18|ENSG00000110427|chr11:33543161-33543162|-/A|frameshift_variant'] 10456 16463 C[Carbamidomethyl]IESLIAVFQK True NCI_RA007_Epitope_Rep2 1306.6955090220097 1306.6944099358602 68.765 2 -0.26037648452875395 0.06703777627217959 0.7189502613584423 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 15158 11007 EAAGSAQLY True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 47.366 1 -0.2604940564881445 0.06704872109416482 0.7190927743954978 ['ENST00000453914.1_1_20:34064361-34064475:-|nuORF'] 15398 12583 EAILLTRKDTP True NCI_RA007_Epitope_Rep1 1255.71360133487 1255.71250993586 52.925 2 -0.26049473064249296 0.06704872109416482 0.7190935912188561 ['nc|ENSG00000180953|Q9HBF5|ST20'] 57709 4312 LEEKSRLVSA True H1975_Epitope_Rep2 1130.62953735774 1130.62789490379 21.697 3 -0.2605822213372293 0.06704872109416482 0.7191995641793593 ['ENSG00000128683|ENST00000358196|GAD1', 'nc|ENSG00000128683|Q99259-3|GAD1', 'nc|ENSG00000128683|Q99259-4|GAD1'] 70633 25536 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 110.4 3 -0.260602894922189 0.06704872109416482 0.7192245954374393 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 55716 19592 LALLAALL True H1975_Epitope_Rep2 796.54222592348 796.54167496793 81.291 1 -0.2607419976891122 0.06704872109416482 0.7193929237704254 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 16143 10708 EECPPTSPSP True PC9_epitope_Rep1 1042.4277263167 1042.42662993586 46.077 2 -0.26081163159326926 0.06704872109416482 0.7194771256512776 ['ENST00000582168.5_1_17:72769619-72771837:-|nuORF', 'ENST00000582993.5_1_17:72769619-72771837:-|nuORF', 'ENST00000582118.1_1_17:72769619-72771837:-|nuORF'] 55075 9337 KYVKGLISI True NCI_RA007_Epitope_Rep4 1019.6379172134698 1019.63682993586 42.771 2 -0.26090821162065825 0.0671195005401051 0.7195938424951768 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35'] 108546 11080 SYNEHWNYL True NCI_RA007_Epitope_Rep3 1224.5199869087598 1224.5188899358602 50.683 2 -0.2609308144257114 0.0671195005401051 0.7196211464739378 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 130747 5809 VSYDEWNRK True NCI_RA007_Epitope_Rep1 1195.56218607391 1195.56108993586 26.65 2 -0.26101687907742105 0.06715488831929696 0.7197250719569654 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 65090 24464 LQLSLPLFL True PC9_epitope_Rep1 1042.64266824074 1042.6415699358602 98.943 2 -0.26111486956330315 0.06717196682594606 0.7198433215293611 ['ENST00000495882.1_1_7:99764639-99764801:-|nuORF'] 34308 6289 GPALPDRDR True H1975_Epitope_Rep3 995.51484195867 995.51374993586 29.196 2 -0.2611536264293254 0.06718289490544968 0.7198900686953332 ['ENST00000423600.1_1_3:195384570-195384792:-|nuORF'] 62938 23382 LLPECFYSF True PC9_epitope_Rep1 1117.5154191222898 1117.5143299358601 94.72 2 -0.26115569491077884 0.06718289490544968 0.7198925632664753 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1', 'ENST00000522920.1_1_8:95655542-95658518:+|nuORF'] 141812 16737 YVDDGLISL True NCI_RA007_Epitope_Rep1 993.5018772331299 993.50132496793 69.228 1 -0.2611732064914976 0.06718289490544968 0.7199136806304903 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 82383 18750 PPLLPPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 77.498 2 -0.2611888120093979 0.06718289490544968 0.7199324972656647 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENST00000525088.5_1_11:67202187-67202637:+|nuORF', 'ENSG00000175634|ENST00000312629|RPS6KB2'] 104597 15547 SQRPPRRRWRR True H1975_Epitope_Rep1 1549.8926773824098 1549.89158993586 65.082 2 -0.2611959685928276 0.06718289490544968 0.7199411257548524 ['ENST00000584868.1_1_19:40827171-40828232:-|nuORF'] 118232 20358 TYLDNGVVF True PC9_epitope_Rep4 1026.5022115862998 1026.5016749679298 86.449 1 -0.26120968819632107 0.06718289490544968 0.7199576658768074 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 14791 11634 DVPQSPPESP True H1975_Epitope_Rep1 1051.48220441771 1051.48110993586 49.74 2 -0.2612142175938548 0.0671999707109907 0.7199631260915935 ['ENSG00000214872|ENST00000527972|SMTNL1'] 96531 12046 SADRGLVL True PC9_epitope_Rep5 829.46576650793 829.46466993586 51.329 2 -0.26122437959528794 0.06721212454011312 0.7199753758102201 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 45971 10711 ISERQAEVL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 52.011 2 -0.26123627271291017 0.06721212454011312 0.7199897111803971 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 109267 19092 TATLWIAVF True NCI_RA007_Epitope_Rep3 1020.5644179200398 1020.56332993586 83.394 2 -0.26127198807783963 0.06721212454011312 0.7200327534972815 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'ENST00000526482.1_1_14:92920194-92959969:+|nuORF', 'nc|ENSG00000140090|Q8NFF2-4|SLC24A4', 'nc|ENSG00000140090|Q8NFF2-2|SLC24A4'] 32875 9075 GHSGAVMEL True PC9_epitope_Rep4 899.4171020633501 899.41600993586 42.49 2 -0.2612989236525807 0.06721212454011312 0.7200652077203082 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40'] 5902 6358 APGKGILAA True PC9_epitope_Rep6 796.4806882960798 796.47958993586 33.033 2 -0.2613303068101698 0.06721212454011312 0.7201030130186272 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ALDOA|p.L116Pfs*38|1|0.13|ENSG00000149925|chr16:30068662-30068663|-/CC|frameshift_variant', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 64159 19420 LPFLNIEI True NCI_RA007_Epitope_Rep4 957.5535188831699 957.55297496793 83.965 1 -0.2613913454830308 0.0672291979353516 0.720176518585909 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A'] 42396 11385 IEDGERCVRP True PC9_epitope_Rep1 1172.56080617492 1172.5597099358602 48.673 2 -0.26145537742137465 0.06724257842527179 0.7202535949575094 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000523198.5_1_5:153826164-153832030:+|nuORF'] 37426 4364 GVTFPCHFARR True NCI_RA007_Epitope_Rep3 1289.64514493557 1289.64349490379 23.931 3 -0.26147728725651503 0.06724257842527179 0.7202799602664538 ['ENST00000397501.5_1_8:27316032-27316239:+|nuORF'] 18679 8447 ELAERQQK True NCI_RA007_Epitope_Rep2 1000.5301576696401 1000.52906993586 37.499 2 -0.2614996121930739 0.06724257842527179 0.7203068209254986 ['nc|ENSG00000100206|Q14565-2|DMC1', 'ENSG00000100206|ENST00000216024|DMC1'] 48791 13149 KDLWPEQDIK True PC9_epitope_Rep4 1270.65575210558 1270.65409490379 58.474 3 -0.26151102290570016 0.06724257842527179 0.7203205483120898 ['ENST00000600692.5_1_19:21350445-21366834:+|nuORF', 'ENSG00000196705|ENST00000311048|ZNF431'] 79356 7879 PASASSSTPVP True PC9_epitope_Rep1 999.48728979815 999.48618993586 35.134 2 -0.26152985472470824 0.06725964970076319 0.7203432010843472 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-5|NCAM1'] 58020 6859 LEHNQVQL True PC9_epitope_Rep2 979.50869394907 979.50758993586 31.786 2 -0.26170753607992636 0.06729009589341922 0.7205567868199736 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 57763 15486 LEEPPLVLAA True H1975_Epitope_Rep1 1050.5961119711399 1050.59557496793 64.839 1 -0.2617199152616935 0.06729009589341922 0.7205716575952454 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9', 'ENST00000464863.1_1_6:32825734-32826344:+|nuORF', 'ENST00000467593.1_1_6:32823908-32826344:+|nuORF'] 118230 21055 TYLDNGVVF True PC9_epitope_Rep2 1026.5022115862998 1026.5016749679298 86.442 1 -0.261811431398154 0.06729009589341922 0.7206815535525034 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 1656 9100 AEFVEVTK True PC9_epitope_Rep1 921.4807478657299 921.47964993586 39.854 2 -0.2618218976464923 0.06729009589341922 0.7206941173346991 ['CON__P02769'] 31236 13749 GDDIALLK True H1975_Epitope_Rep3 843.47018318203 843.46908993586 58.184 2 -0.2618651504406065 0.06729009589341922 0.7207460286589372 ['ENSG00000166278|ENST00000299367|C2', 'nc|ENSG00000166278|P06681-2|C2', 'nc|ENSG00000166278|P06681-3|C2', 'ENST00000486124.5_1_6:31905151-31913001:+|nuORF'] 82650 4865 PQNQTIESP True H1975_Epitope_Rep2 1012.48253877088 1012.48144993586 23.801 2 -0.26188985158883216 0.06729977493549981 0.7207756675608482 ['ENST00000371206.6_1_10:97583001-97605437:+|nuORF', 'nc|ENSG00000138185|P49961-3|ENTPD1', 'nc|ENSG00000138185|P49961-4|ENTPD1', 'nc|ENSG00000138185|P49961-5|ENTPD1', 'ENSG00000138185|ENST00000371205|ENTPD1', 'nc|ENSG00000138185|P49961-2|ENTPD1', 'nc|ENSG00000138185|P49961-6|ENTPD1', 'ENST00000422161.2_1_10:97604371-97605854:+|nuORF'] 53249 7465 KQFQFGHAL True NCI_RA007_Epitope_Rep3 1074.5610638750998 1074.5599699358602 36.483 2 -0.2619395215378131 0.06729977493549981 0.7208352510648546 ['ENSG00000018510|ENST00000264167|AGPS'] 56113 8460 LATVTVRP True PC9_epitope_Rep6 855.5178020807899 855.51670993586 42.245 2 -0.2620146669723012 0.06729977493549981 0.7209253554632634 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 12936 13863 DLKRCQYVT True PC9_epitope_Rep6 1124.5648289261999 1124.56372993586 65.145 2 -0.26202967580835695 0.06729977493549981 0.7209433464094882 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000566146.1_1_16:30080209-30080764:+|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 33559 6628 GLERAASLAV True PC9_epitope_Rep6 985.5556441414898 985.55454993586 34.212 2 -0.2620482640712533 0.06729977493549981 0.7209656253734112 ['ENST00000433688.2_2_11:63533575-63533752:-|nuORF'] 42339 10869 IEALQKAG True PC9_epitope_Rep5 828.4705175351999 828.46942993586 46.796 2 -0.262051126314641 0.06729977493549981 0.7209690556592492 ['ENSG00000068650|ENST00000375645|ATP11A', 'ENST00000459908.5_1_13:113439469-113512287:+|nuORF'] 129064 4438 VQPEELRV True PC9_epitope_Rep5 968.5290950404798 968.52798993586 22.139 2 -0.26211503202281944 0.06729977493549981 0.7210456263354497 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000481673.5_1_22:51020665-51021234:-|nuORF', 'nc|ENSG00000100288|Q9Y259-2|CHKB', 'ENST00000492556.5_1_22:51020829-51021234:-|nuORF'] 118733 15394 TYVSFRNLT True PC9_epitope_Rep1 1099.56620882519 1099.5651099358602 64.031 2 -0.26213747302049234 0.06731560939015242 0.7210725066605519 ['ENSG00000146242|ENST00000369750|TPBG'] 105376 17922 SRRRPRPRWRL True NCI_RA007_Epitope_Rep5 1534.9181638542598 1534.9170699358601 75.728 2 -0.262156330888352 0.06731560939015242 0.7210950917891101 ['nc|ENSG00000120913|Q96JY6-2|PDLIM2'] 27018 13035 FLETRKSWRK True PC9_epitope_Rep6 1349.7568035595298 1349.75515490379 61.725 3 -0.26217782086571456 0.06733144268593907 0.7211208256536729 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 35575 11787 GTADALGL True H1975_Epitope_Rep3 716.37046914076 716.36992496793 50.485 1 -0.2622537888167215 0.06733144268593907 0.7212117651144717 ['ENSG00000100151|ENST00000356976|PICK1', 'nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 33829 11745 GLNKEQSNLLP True NCI_RA007_Epitope_Rep4 1211.65100107831 1211.64990993586 52.147 2 -0.2623107179573046 0.0673838666593483 0.7212798822105339 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 11849 11957 DHHENKYLLL True PC9_epitope_Rep2 1280.65133543148 1280.6502299358601 51.314 2 -0.26233040504175603 0.0673838666593483 0.7213034320201708 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 32180 7628 GEVTKIMSP True NCI_RA007_Epitope_Rep4 960.4950180308799 960.49392993586 35.994 2 -0.2623610843408694 0.06741922499908522 0.7213401243709092 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 131926 7578 VTRSENSI True PC9_epitope_Rep5 904.4614094034799 904.46030993586 34.097 2 -0.26241344456881255 0.06745334796926454 0.7214027290156996 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 6532 10548 APTLPGSAA True PC9_epitope_Rep3 783.41266830591 783.41156993586 45.517 2 -0.26242233281635857 0.06745334796926454 0.7214133540158741 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 62484 16679 LLIHRKNLNYL True PC9_epitope_Rep3 1395.83505388023 1395.83341490379 69.293 3 -0.2624649261500945 0.06747040851795613 0.7214642609516202 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 8332 7402 ATIRVLESVQK True NCI_RA007_Epitope_Rep4 1242.7295857521797 1242.7279349037901 35.113 3 -0.2625197570033109 0.067487468442428 0.7215297718811186 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B'] 90357 12327 REFVLLPAA True NCI_RA007_Epitope_Rep3 1014.5862159937798 1014.58510993586 55.672 2 -0.2625633262608279 0.06749835369869027 0.721581809925171 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENSG00000105287|ENST00000291281|PRKD2'] 111171 8213 THGPPVQL True PC9_epitope_Rep4 847.45520182423 847.45410993586 39.05 2 -0.2625812043224763 0.06749835369869027 0.7216031584999779 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant'] 70666 26428 LWHIWRERN True PC9_epitope_Rep5 1308.68397297244 1308.68233490379 107.57 3 -0.2625944055542597 0.06749835369869027 0.721618920677679 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 117115 17574 TVKDVNLDI True PC9_epitope_Rep2 1015.5549754351499 1015.55386993586 72.874 2 -0.2625978791024059 0.06749835369869027 0.7216230678304777 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2', 'ZCCHC2|p.G622A|1|0.42|ENSG00000141664|chr18:62570121-62570121|G/C|missense_variant'] 106528 11242 STLPKSLSL True PC9_epitope_Rep5 944.55424715916 944.55314993586 48.232 2 -0.26277602678770207 0.06749835369869027 0.7218356291845054 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 122760 18846 VGGLTLEVIL True PC9_epitope_Rep5 1012.6168474157199 1012.61574993586 77.508 2 -0.2628271414864294 0.06749835369869027 0.7218965696968304 ['ENST00000378119.8_1_6:24720133-24720250:-|nuORF'] 35636 18153 GTDGFVINL True PC9_epitope_Rep5 934.47599683846 934.47488993586 74.834 2 -0.2629175925130012 0.06755075910005487 0.7220043555550435 ['ENSG00000100079|ENST00000215886|LGALS2'] 130580 10106 VSRVVCAMI True PC9_epitope_Rep1 976.5197933100799 976.51868993586 43.745 2 -0.2629243964226132 0.06755075910005487 0.7220124607085827 ['nc|ENSG00000104055|O43548-2|TGM5', 'ENSG00000104055|ENST00000220420|TGM5'] 131975 18386 VTSETAKLP True PC9_epitope_Rep3 944.5178616504398 944.51676993586 75.929 2 -0.26294907196280815 0.06756781474639205 0.7220418522448634 ['ENST00000523988.5_1_13:45969985-45970081:-|nuORF'] 85334 6087 QESPPAAAV True H1975_Epitope_Rep2 868.4290466460399 868.4279499358599 28.388 2 -0.26299919021247087 0.0675799253785939 0.7221015337353881 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 97655 11191 SEGLAQLTS True PC9_epitope_Rep1 904.45017601344 904.44962496793 47.928 1 -0.2630216635112102 0.0675799253785939 0.7221282885577538 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 121241 20366 VETDQRKM True PC9_epitope_Rep1 1005.4913296327699 1005.49022993586 83.162 2 -0.2630270664947634 0.0675799253785939 0.7221347202792905 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 41737 8938 IALYFHPFCL True PC9_epitope_Rep5 1222.62088725034 1222.6192349037901 39.324 3 -0.2630457712786076 0.0675799253785939 0.7221569846416447 ['ENSG00000078589|ENST00000171757|P2RY10', 'P2RY10|p.R281Q|1|0.21|ENSG00000078589|chrX:78961362-78961362|G/A|missense_variant'] 111138 10616 THFHELTAL True PC9_epitope_Rep6 1067.53999407735 1067.5388899358602 51.652 2 -0.2630555482272732 0.0675799253785939 0.7221686210339089 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 20700 12228 EQEFLTEAL True H1975_Epitope_Rep2 1078.51825557326 1078.51767496793 52.118 1 -0.2631138898380522 0.0675920337960169 0.7222380421687765 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 127856 18901 VPFPTPLEA True PC9_epitope_Rep6 969.5171333744498 969.51602993586 85.349 2 -0.26317333172099866 0.0675920337960169 0.7223087439000083 ['ENSG00000196976|ENST00000357360|LAGE3'] 94077 5662 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 26.853 2 -0.2631915984559047 0.0675920337960169 0.7223304650338258 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 69413 14824 LTWRVVSP True PC9_epitope_Rep3 956.5443511817998 956.54324993586 62.157 2 -0.26323643587696666 0.0675920337960169 0.7223837700529421 ['ENSG00000164363|ENST00000324642|SLC6A18'] 4879 5423 ALERNSWLQKR True NCI_RA007_Epitope_Rep1 1399.76843087239 1399.76677490379 25.167 3 -0.2632483232874755 0.0675920337960169 0.7223978996633431 ['ENST00000586864.1_1_19:56160799-56160967:+|nuORF', 'ENSG00000173581|ENST00000586790|CCDC106'] 133448 14336 VVYGGGAAEI True PC9_epitope_Rep2 934.4759968384599 934.47488993586 60.407 2 -0.2633013721048715 0.06760661253748812 0.7224609404887008 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 16676 7118 EEREKQLAA True NCI_RA007_Epitope_Rep4 1072.5512870370396 1072.55018993586 33.999 2 -0.26331414183314816 0.06760661253748812 0.7224761120337093 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7'] 103252 7460 SPLHNQVL True PC9_epitope_Rep2 906.49231560894 906.49120993586 34.069 2 -0.263364620814613 0.06760661253748812 0.7225360724424296 ['SPATA31E1|p.P1087Qfs*6|1|0.41|ENSG00000177992|chr9:87887746-87887746|C/-|frameshift_variant', 'ENSG00000177992|ENST00000325643|SPATA31E1'] 17580 15813 EHIFKWIT True PC9_epitope_Rep4 1072.57056592964 1072.56946993586 68.749 2 -0.2634072007746329 0.06764071243096953 0.7225866340391187 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 60361 8603 LGSTGSELLR True NCI_RA007_Epitope_Rep1 1031.56112344475 1031.56002993586 37.465 2 -0.26344259692911054 0.06764071243096953 0.7226286540004021 ['ENST00000452236.2_1_6:28554764-28555010:-|nuORF'] 136750 20501 WYMDNPQNL True PC9_epitope_Rep5 1179.5018943164698 1179.5007899358602 83.896 2 -0.26351632584139495 0.06765776144239033 0.7227161473839773 ['nc|ENSG00000107679|Q9HB21-2|PLEKHA1', 'ENSG00000107679|ENST00000368990|PLEKHA1', 'ENSG00000169499|ENST00000617275|PLEKHA2'] 46284 9222 ISPTGWNNV True NCI_RA007_Epitope_Rep5 986.4821448480601 986.48104993586 42.123 2 -0.26355748101203735 0.06774671323300846 0.7227649666396361 ['ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'nc|ENSG00000134955|Q8TED4-4|SLC37A2'] 94079 5851 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 27.571 2 -0.26363322860751814 0.06774671323300846 0.722854784376506 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 128674 9232 VPVQPGSSV True PC9_epitope_Rep3 868.4654321547599 868.46432993586 40.452 2 -0.26371640182664996 0.06778204424940575 0.7229533535505405 ['nc|ENSG00000149476|Q3LXA3-2|TKFC', 'ENSG00000149476|ENST00000394900|TKFC', 'ENST00000524953.1_1_11:61110045-61110363:+|nuORF'] 130721 7225 VSVPQAGP True H1975_Epitope_Rep2 753.4021036222099 753.40100993586 32.725 2 -0.2637297937032733 0.06779908942970507 0.7229692191306775 ['JAG1|p.P248Sfs*165|1|0.24|ENSG00000101384|chr20:10656411-10656412|-/GA|frameshift_variant'] 92092 16334 RKWRRKRRWNN True NCI_RA007_Epitope_Rep2 1654.9505266116994 1654.94942993586 68.263 2 -0.26379799220411115 0.06781613398668909 0.7230499925632713 ['ENST00000553345.5_1_20:31020694-31021097:+|nuORF'] 94080 5942 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 27.914 2 -0.26384420234289896 0.06784649980803335 0.7231047019279528 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 110900 5960 TGVFRNQVD True NCI_RA007_Epitope_Rep4 1034.5145076054998 1034.5134099358602 29.544 2 -0.2639076415822851 0.06784649980803335 0.7231797812295551 ['ENSG00000244509|ENST00000361441|APOBEC3C'] 140626 22218 YRRRLWKWWKS True H1975_Epitope_Rep1 1663.9211835460299 1663.92008993586 92.441 2 -0.2639355858611338 0.06784649980803335 0.7232128425433568 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 8184 9000 ATEVDSRWQEY True H1975_Epitope_Rep1 1382.6102584651399 1382.60916993586 39.525 2 -0.2639780569313697 0.06784649980803335 0.72326307869964 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'MACF1|p.S820Afs*39|1|0.14|ENSG00000127603|chr1:39297705-39297705|C/-|frameshift_variant', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 140627 22102 YRRRLWKWWKS True H1975_Epitope_Rep3 1663.9211835460299 1663.92008993586 92.432 2 -0.26398370121366205 0.06784649980803335 0.7232697538473317 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 40638 12083 HRNELQMQL True PC9_epitope_Rep1 1167.5818759726699 1167.5807699358602 51.337 2 -0.2640848417751715 0.0679001060367838 0.7233893232206924 ['ENSG00000067900|ENST00000399799|ROCK1'] 25956 8606 FFYFFMEHWIP True NCI_RA007_Epitope_Rep1 1562.7056795034598 1562.7040349037902 37.477 3 -0.2641208772829513 0.06791466335167547 0.7234319049156317 ['ENSG00000176894|ENST00000317479|PXMP2'] 88216 5793 QSALSIAKEK True NCI_RA007_Epitope_Rep5 1073.6080736371698 1073.6069699358602 28.969 2 -0.26412190147848297 0.06791466335167547 0.723433115013669 ['TET3|p.K1103Rfs*79|1|0.42|ENSG00000187605|chr2:74099315-74099315|A/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3'] 94557 7495 RRRWHWHWPRP True NCI_RA007_Epitope_Rep5 1668.87629904228 1668.87520993586 35.512 2 -0.26413898400294156 0.06791466335167547 0.7234532969602576 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 120277 5157 VEDFDWCTPP True H1975_Epitope_Rep2 1207.4855755459898 1207.48446993586 24.913 2 -0.26417396992500675 0.06792673564142873 0.7234946233650875 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'SMCHD1-NDC80|5|fusion'] 15980 5173 EDRFNSIP True H1975_Epitope_Rep2 976.4614094034799 976.46030993586 24.974 2 -0.26418903136983796 0.06792673564142873 0.7235124113697244 ['nc|ENSG00000101190|Q9UL49-1|TCFL5', 'ENSG00000101190|ENST00000335351|TCFL5', 'TCFL5|p.R402Gfs*22|1|0.13|ENSG00000101190|chr20:62857430-62857430|A/-|frameshift_variant'] 122775 14903 VGGPEIEVG True PC9_epitope_Rep1 855.4337976733099 855.43270993586 62.145 2 -0.2642078757367158 0.06792673564142873 0.723534664557549 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 13014 4337 DLNDKEKKDEE True NCI_RA007_Epitope_Rep1 1361.63105347937 1361.6293949037902 20.979 3 -0.26428860024190076 0.06792673564142873 0.7236299594376792 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant', 'ENST00000564383.1_1_15:28525212-28544620:-|nuORF'] 15824 9528 EDEEYDEEDY True H1975_Epitope_Rep2 1334.4310162601398 1334.42990993586 41.621 2 -0.2643262003815235 0.06792673564142873 0.7236743284361136 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152', 'ENST00000559630.1_1_15:49097750-49103222:-|nuORF', 'ENST00000559444.1_1_15:49090143-49103222:-|nuORF'] 102313 9475 SLSQNPSL True PC9_epitope_Rep6 844.42904664604 844.4279499358599 46.69 2 -0.2644077932527043 0.06796205238817701 0.7237705710169999 ['ENST00000595638.1_1_19:51485457-51485655:-|nuORF'] 118474 20922 TYPNTYIF True PC9_epitope_Rep3 1017.48074786573 1017.47964993586 85.753 2 -0.2644506330103577 0.06797784642380596 0.7238210812476615 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 4502 7440 AKAGGLLQ True NCI_RA007_Epitope_Rep4 756.4493881678 756.44828993586 35.262 2 -0.26445451039100093 0.06797784642380596 0.7238256521530366 ['nc|ENSG00000142405|P59046-5|NLRP12'] 101697 18371 SLMITC[Carbamidomethyl]VTI True PC9_epitope_Rep5 1036.52968956687 1036.52858993586 75.683 2 -0.26453239757304964 0.0679923965492031 0.7239174452189608 ['ENSG00000128519|ENST00000249284|TAS2R16', 'TAS2R16|p.G132C|1|0.09|ENSG00000128519|chr7:122995241-122995241|C/A|missense_variant'] 27898 17872 FQDSIHVGF True PC9_epitope_Rep3 1048.4977949121999 1048.49668993586 73.942 2 -0.26457481240038533 0.0679923965492031 0.7239674124461818 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'SDK2|p.P1051Lfs*33|1|0.18|ENSG00000069188|chr17:73398361-73398371|GCGGGCATCGG/-|frameshift_variant', 'SDK2|p.S1083Vfs*66|1|0.28|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 9732 14312 AYGSAVLTF True NCI_RA007_Epitope_Rep3 927.47018318203 927.46908993586 63.613 2 -0.26461489554118844 0.0679923965492031 0.7240146196693825 ['nc|ENSG00000179698|A6NE52-2|WDR97', 'ENSG00000179698|ENST00000323662|WDR97'] 88739 9400 QTLEELEELGK True H1975_Epitope_Rep1 1287.6558116752296 1287.6547099358602 41.07 2 -0.2646332460685941 0.06800570217121135 0.724036227427562 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant', 'ENSG00000253797|ENST00000521776|UTP14C'] 30884 10412 GAPQVVAVTG True PC9_epitope_Rep5 897.4919812557698 897.4914349679301 45.035 1 -0.2646434867855386 0.06800570217121135 0.7240482847167174 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 97056 4609 SDDGVDLKTQP True NCI_RA007_Epitope_Rep3 1173.55134660669 1173.5502499358602 25.044 2 -0.2647194191098376 0.06800570217121135 0.7241376605180848 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN', 'LYN|p.E110Kfs*15|1|0.08|ENSG00000254087|chr8:55950495-55950495|A/-|frameshift_variant'] 59995 18779 LGILSEGQFGI True PC9_epitope_Rep5 1132.61282466444 1132.61172993586 77.246 2 -0.26476297415112005 0.06800570217121135 0.7241889061654706 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 130942 7888 VTDKEQEFAAR True H1975_Epitope_Rep3 1292.63607929016 1292.6349899358602 35.317 2 -0.2647930168104545 0.06802273516457408 0.7242242447699295 ['ENSG00000082397|ENST00000341928|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-3|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-2|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-4|EPB41L3'] 40135 7338 HPYPPGPGV True PC9_epitope_Rep4 919.4552018242299 919.45410993586 35.554 2 -0.2648859883897984 0.06805679928361263 0.7243335602431759 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 86922 7726 QLTAQLAD True PC9_epitope_Rep5 858.4446967101799 858.44358993586 34.659 2 -0.26490891948830425 0.06805679928361263 0.7243605120063128 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 28882 17338 FTDEEVDELYR True PC9_epitope_Rep5 1414.6252398229399 1414.62358490379 71.69 3 -0.26493941730760856 0.06807258639279253 0.7243963507854876 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 82605 7065 PQEEAPEV True H1975_Epitope_Rep3 897.4079768482899 897.4074249679301 32.143 1 -0.2649922962402762 0.06807258639279253 0.7244584728091886 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 67597 18893 LSVETLLDV True PC9_epitope_Rep1 987.5488274255499 987.54772993586 77.457 2 -0.2650271427689879 0.06808588396528095 0.7244993983718355 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 134413 22623 VYPGYYLTF True PC9_epitope_Rep1 1121.54334812229 1121.54277496793 91.828 1 -0.26503285979266344 0.06808588396528095 0.7245061118266398 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 97290 6463 SEAGLAGAPA True H1975_Epitope_Rep2 842.4133965818999 842.41284496793 29.778 1 -0.2650552762302867 0.06808588396528095 0.7245324327867741 ['ENSG00000177879|ENST00000316788|AP3S1', 'COMMD10-AP3S1|1|fusion', 'COMMD10-AP3S1|2|fusion'] 31134 19527 GAVSCLASFLI True PC9_epitope_Rep1 1079.56851732431 1079.56740993586 79.931 2 -0.26506289205414496 0.06808588396528095 0.7245413742442744 ['ENST00000479818.5_1_22:50717015-50717261:-|nuORF'] 55530 18240 LAGPAELL True PC9_epitope_Rep6 782.4538048418999 782.4532549679301 82.801 1 -0.2650844456367734 0.06810042391463236 0.7245666770368708 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 56111 9065 LATVTVRP True PC9_epitope_Rep4 855.5178020807899 855.51670993586 42.45 2 -0.26512865282919496 0.06810042391463236 0.7246185625693015 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 94078 5759 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 27.223 2 -0.26516365338771886 0.06810042391463236 0.7246596314786071 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 82479 8599 PPQPPPPPP True PC9_epitope_Rep5 922.4912529797799 922.49014993586 38.018 2 -0.2651816484902369 0.06813572329112537 0.7246807428045356 ['HOXD3|p.S341Tfs*88|1|0.15|ENSG00000128652|chr2:176171993-176171996|GCGA/-|frameshift_variant', 'ENSG00000128652|ENST00000683222|HOXD3', 'ENSG00000077044|ENST00000264057|DGKD', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'DGKD-SAG|2|fusion', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 127136 4931 VLTSVEQK True PC9_epitope_Rep3 902.50729696674 902.50618993586 24.062 2 -0.2652559148868963 0.06814901430581186 0.7247678430854521 ['ENST00000302764.8_1_5:162880914-162881052:-|nuORF'] 25232 6027 FDGVEGPR True NCI_RA007_Epitope_Rep2 875.4137309350699 875.41262993586 28.053 2 -0.2652771976778122 0.06814901430581186 0.7247927957592237 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 1338 7265 AEDVVARVP True H1975_Epitope_Rep2 954.5134449763399 954.51234993586 32.881 2 -0.2653349776261961 0.06814901430581186 0.7248605210666269 ['ENSG00000197724|ENST00000359246|PHF2'] 17995 15478 EIDQELVIP True H1975_Epitope_Rep2 1054.55464108198 1054.55354993586 64.692 2 -0.2653415068121989 0.06814901430581186 0.7248681724441902 ['ENSG00000101544|ENST00000262198|ADNP2', 'ADNP2|p.V571Cfs*147|1|0.2|ENSG00000101544|chr18:80137122-80137123|-/T|frameshift_variant', 'ADNP2|p.L794Qfs*9|1|0.3|ENSG00000101544|chr18:80137794-80137798|TGGGG/-|frameshift_variant', 'ADNP2|p.H128Mfs*12|1|0.23|ENSG00000101544|chr18:80135794-80135794|C/-|frameshift_variant'] 34110 21450 GMEAALLNV True PC9_epitope_Rep4 916.46880328304 916.46770993586 90.695 2 -0.26539338451297084 0.06818306385311045 0.7249289546808119 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000598424.5_1_19:17597384-17597952:+|nuORF'] 85160 3923 QENGNVHAIA True NCI_RA007_Epitope_Rep4 1051.5046711977898 1051.50356993586 21.322 2 -0.26540787434496027 0.06818306385311045 0.7249459278587652 ['ENSG00000109321|ENST00000395748|AREG'] 99720 8027 SIHQSVVAV True PC9_epitope_Rep5 938.5185303567798 938.51742993586 35.814 2 -0.26547707205794635 0.06824866188049176 0.7250269624400392 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 94075 5902 RRLKHKRKK True PC9_epitope_Rep1 1248.83672564608 1248.8356299358602 27.518 2 -0.2654870193141833 0.06824866188049176 0.7250386081876512 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 70673 24254 LWHIWRERN True PC9_epitope_Rep6 1308.68397297244 1308.68233490379 107.1 3 -0.2655155714138948 0.06824866188049176 0.7250720312612278 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 38361 10637 HEIKSELL True PC9_epitope_Rep5 967.5338460677499 967.53274993586 45.903 2 -0.26552223617328263 0.06824866188049176 0.7250798321093801 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 89889 25411 RCCLLRHLLRL True PC9_epitope_Rep1 1394.8114990680199 1394.8104099358602 102.72 2 -0.2655264129206241 0.06824866188049176 0.7250847206570971 ['nc|ENSG00000162891|Q9NYY1-2|IL20', 'ENSG00000162891|ENST00000367098|IL20'] 94081 6326 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 29.363 2 -0.26552725951868245 0.06824866188049176 0.7250857115156205 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 31692 6362 GEFVSDRK True NCI_RA007_Epitope_Rep2 936.4664947839199 936.46538993586 29.352 2 -0.26557094776992135 0.06826194172983834 0.7251368366627399 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 138002 4445 YFSCLRRSRP True PC9_epitope_Rep6 1283.6557096192698 1283.65405490379 24.254 3 -0.26557399990827724 0.06826194172983834 0.7251404077993052 ['ENST00000529983.2_1_12:89918135-89918465:-|nuORF'] 47642 21307 IWETFRRWHRK True NCI_RA007_Epitope_Rep1 1613.86914797317 1613.8680499358602 87.182 2 -0.26557434735916297 0.06826194172983834 0.7251408143275673 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 67632 19390 LSVPGLVSV True PC9_epitope_Rep6 869.52221875489 869.52167496793 87.236 1 -0.2655754733903609 0.06826194172983834 0.7251421318123583 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'PELP1|p.G710C|1|0.53|ENSG00000141456|chr17:4672863-4672863|C/A|missense_variant'] 73705 8890 MYRRWWEQFVQ True PC9_epitope_Rep2 1627.77180200067 1627.7701649037901 39.55 3 -0.26564921883964066 0.06829722719468088 0.725228394309403 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 117340 15221 TVNWYQQLP True PC9_epitope_Rep3 1147.56620882519 1147.5651099358602 63.694 2 -0.26568644576996925 0.06834828033388737 0.7252719237782408 ['nc|ENSG00000211651|P01699|IGLV1-44'] 97636 12234 SEFQIPTA True NCI_RA007_Epitope_Rep3 891.4337976733099 891.43270993586 55.267 2 -0.26569704095525604 0.06834828033388737 0.7252843107590288 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA', 'nc|ENSG00000132185|Q7L513-10|FCRLA', 'nc|ENSG00000132185|Q7L513-9|FCRLA', 'nc|ENSG00000132185|Q7L513-2|FCRLA', 'ENSG00000132185|ENST00000236938|FCRLA', 'nc|ENSG00000132185|Q7L513-12|FCRLA', 'nc|ENSG00000132185|Q7L513-5|FCRLA', 'nc|ENSG00000132185|Q7L513-14|FCRLA', 'nc|ENSG00000132185|Q7L513-3|FCRLA', 'ENST00000470841.1_1_1:161681590-161683167:+|nuORF'] 108889 6978 TAAPPAQPL True NCI_RA007_Epitope_Rep3 864.4705175352 864.46942993586 34.557 2 -0.26578087297823927 0.06834828033388737 0.7253822891171715 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 76291 6031 NPNQYHYVA True PC9_epitope_Rep4 1104.49885754136 1104.49776993586 30.181 2 -0.26583361736041733 0.06836529680365297 0.725443905854136 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A'] 33776 11701 GLLADAAGL True H1975_Epitope_Rep2 799.44396843419 799.44341496793 50.082 1 -0.26589086864438277 0.06841759205143191 0.7255107630992242 ['ENST00000576921.1_1_16:3073505-3073679:-|nuORF'] 38048 8707 HASGDVLV True PC9_epitope_Rep2 796.4079172786401 796.40682993586 38.854 2 -0.265935433848588 0.06841759205143191 0.7255627880582681 ['ENSG00000106648|ENST00000392800|GALNTL5'] 139196 16216 YLEQQFNLT True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 67.367 2 -0.26594805675563277 0.06843085689239535 0.7255775211006465 ['nc|ENSG00000176463|Q9UIG8-3|SLCO3A1', 'ENST00000553653.5_1_15:92397138-92694297:+|nuORF', 'nc|ENSG00000176463|Q9UIG8-2|SLCO3A1', 'ENSG00000176463|ENST00000318445|SLCO3A1', 'nc|ENSG00000176463|Q9UIG8-4|SLCO3A1', 'ENST00000555549.5_1_15:92641439-92706362:+|nuORF'] 123420 16118 VGNFSQACDP True PC9_epitope_Rep3 1036.4283950230397 1036.42728993586 67.148 2 -0.2659577265280312 0.06843085689239535 0.7255888065026289 ['nc|ENSG00000127952|Q9Y6J8-4|STYXL1', 'nc|ENSG00000127952|Q9Y6J8-2|STYXL1', 'ENSG00000127952|ENST00000359697|STYXL1', 'nc|ENSG00000127952|Q9Y6J8-3|STYXL1'] 139173 19401 YLEDGFAYV True PC9_epitope_Rep6 1075.48622716899 1075.4851299358602 87.281 2 -0.26600928051863043 0.06843085689239535 0.7256489618776173 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 112124 10397 TIWTQQSQGGP True PC9_epitope_Rep2 1201.5727507576098 1201.57111490379 45.314 3 -0.2660212766466039 0.06843085689239535 0.7256629565017282 ['ENST00000464023.1_1_22:24177016-24178512:-|nuORF', 'ENST00000404056.1_1_22:24177016-24177280:-|nuORF', 'nc|ENSG00000099958|Q96Q80-2|DERL3'] 64756 9494 LQAEASGWGSY True PC9_epitope_Rep1 1167.5196525555898 1167.5185499358602 41.375 2 -0.26607983844780664 0.068466132184013 0.7257312583461065 ['ENST00000413916.5_1_7:44807309-44807855:+|nuORF'] 59773 10143 LGEGASLPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43833496793 45.874 1 -0.2661183242590038 0.06850015522562501 0.7257761306279926 ['ENST00000313401.3_1_17:30816702-30816975:+|nuORF'] 66683 15321 LSLALQRQREK True NCI_RA007_Epitope_Rep1 1340.7888319637998 1340.7877299358602 63.671 2 -0.26614968414422235 0.06850015522562501 0.725812685970782 ['ENST00000406316.6_3_2:51256197-51256272:-|nuORF'] 133698 5291 VYATRSSAVRL True NCI_RA007_Epitope_Rep3 1221.6829699129298 1221.68131490379 27.82 3 -0.2661689185703447 0.06851716581446311 0.7258351032233745 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 83031 10190 PSKTIPGL True PC9_epitope_Rep4 811.4803539429099 811.47924993586 46.873 2 -0.2662779790190608 0.06855118512837369 0.7259621561620024 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 87321 14458 QPRFPAPVP True PC9_epitope_Rep5 1007.5552502186697 1007.55414993586 60.612 2 -0.26632874669010875 0.06855118512837369 0.7260212678406 ['ENST00000548477.5_1_12:113772646-113772703:-|nuORF'] 107655 10840 SVQKLVVVI True PC9_epitope_Rep6 983.6379172134698 983.63682993586 52.554 2 -0.26640752770041304 0.06856068213770564 0.7261129574369751 ['ENSG00000164109|ENST00000296509|MAD2L1'] 128584 13952 VPTNIIAA True PC9_epitope_Rep4 797.4647038787699 797.4641549679301 61.569 1 -0.2664398081657504 0.06856068213770564 0.7261505132805784 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 103404 6395 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 31.2 2 -0.2665482876832843 0.06856068213770564 0.7262766616736993 ['FNBP4|p.E720K|1|0.07|ENSG00000109920|chr11:47724629-47724629|C/T|missense_variant', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'ENSG00000137460|ENST00000511601|FHDC1', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 59992 4184 LGIHEDSTNR True PC9_epitope_Rep3 1140.5523496662001 1140.5506949037901 21.209 3 -0.2665486153730895 0.06856068213770564 0.7262770425986228 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 13893 7596 DQVANSAFVER True NCI_RA007_Epitope_Rep2 1234.59421447818 1234.59367496793 34.171 1 -0.2665611651072989 0.06856068213770564 0.726291630484113 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 100519 13369 SLASNISREWR True NCI_RA007_Epitope_Rep1 1317.67894716165 1317.6778499358602 56.006 2 -0.26656223829197206 0.06856068213770564 0.7262928779036988 ['ENST00000482091.1_1_10:1089580-1089787:-|nuORF'] 87272 8753 QPNYIPQEP True NCI_RA007_Epitope_Rep4 1084.5189242796 1084.5178299358602 40.465 2 -0.2665975958019627 0.06856068213770564 0.726333970826674 ['ENSG00000154485|ENST00000368808|MMP21'] 95950 6269 RYLENGKETL True PC9_epitope_Rep2 1221.6353510141698 1221.63424993586 29.511 2 -0.26668846130682655 0.06857768851561073 0.7264395313885181 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 84435 7314 QAESPLGIRP True H1975_Epitope_Rep2 1066.5771078620598 1066.5760099358602 33.073 2 -0.2667582034025088 0.06859218958245851 0.72652050903495 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000514104.5_1_5:145522433-145523105:-|nuORF', 'ENST00000512412.1_1_5:145519224-145523084:-|nuORF'] 20897 12407 EQLQALEAL True H1975_Epitope_Rep2 1013.5393253710098 1013.53822993586 52.809 2 -0.2667915514960742 0.06859218958245851 0.7265592162510581 ['ENSG00000063515|ENST00000086933|GSC2'] 62850 8030 LLMCRWVWDHH True H1975_Epitope_Rep3 1494.7012799126999 1494.6996449037902 35.86 3 -0.26683844311249855 0.06859218958245851 0.7266136289140278 ['ENST00000525088.5_1_11:67201493-67201556:+|nuORF'] 44677 12822 ILTATKTISF True PC9_epitope_Rep5 1093.63831113629 1093.63720993586 54.329 2 -0.2668739294566982 0.06864570781757769 0.7266547956840406 ['OR1C1|p.G88A|1|0.1|ENSG00000221888|chr1:247758144-247758144|C/G|missense_variant'] 25385 5774 FECECFEGY True H1975_Epitope_Rep2 1125.3783335961298 1125.3772299358602 27.205 2 -0.2669327499571578 0.06866145757265955 0.7267230103473021 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.G1136D|1|0.49|ENSG00000138829|chr5:128338998-128338998|C/T|missense_variant'] 84763 11778 QDVAPNPDDP True H1975_Epitope_Rep2 1066.45671794586 1066.45562993586 50.378 2 -0.2669704247379237 0.06866145757265955 0.7267666880793883 ['nc|ENSG00000130956|Q5JVS0-2|HABP4', 'ENSG00000130956|ENST00000375249|HABP4'] 70898 17814 LYENWNKTF True PC9_epitope_Rep5 1213.57677350889 1213.57566993586 73.54 2 -0.2670902410229343 0.06871497161217299 0.7269055225289232 ['nc|ENSG00000132436|Q6PIW4-2|FIGNL1', 'ENSG00000132436|ENST00000433017|FIGNL1'] 71863 15519 MELQEIQLK True PC9_epitope_Rep4 1130.6005457285798 1130.59944993586 67.619 2 -0.2671538004539861 0.06874646318979208 0.7269791256039506 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 23766 19441 EYGPIHILW True PC9_epitope_Rep6 1126.5811306133398 1126.58002993586 87.441 2 -0.26715901697565136 0.06874646318979208 0.7269851650543946 ['ENSG00000162627|ENST00000306121|SNX7', 'nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7'] 49602 18128 KGAAGFSI True PC9_epitope_Rep5 749.4071890026501 749.40608993586 74.739 2 -0.26718218873608673 0.06874646318979208 0.7270119897218836 ['ENSG00000144029|ENST00000272418|MRPS5'] 82394 16619 PPLPLPPPP True PC9_epitope_Rep6 923.5480395799099 923.54694993586 76.388 2 -0.26721306469361 0.06874646318979208 0.7270477266750939 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 124054 7769 VGSKDYVLS True PC9_epitope_Rep2 966.5022115863 966.50110993586 35.257 2 -0.26725472599016054 0.06876095210280374 0.7270959353152072 ['SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion', 'nc|ENSG00000001617|Q13275-2|SEMA3F', 'ENSG00000001617|ENST00000002829|SEMA3F'] 106719 9092 [Acetylation]-STVHEILC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1127.56449516876 1127.5633899358602 39.97 2 -0.2672682503825485 0.06876095210280374 0.7271115822756927 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 94082 6856 RRLKHKRKK True PC9_epitope_Rep5 1248.83672564608 1248.8356299358602 31.341 2 -0.2672993921595612 0.06876095210280374 0.7271476061953925 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 104918 16158 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.49147496793 70.093 1 -0.2673186415089663 0.06877041849938859 0.7271698695547342 ['ENSG00000113387|ENST00000265073|SUB1'] 44989 13261 IPATPGIGA True PC9_epitope_Rep2 795.4490538146299 795.44794993586 56.282 2 -0.26734550540182567 0.06877041849938859 0.7272009349472388 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 14236 15989 DSILVNTNLRA True NCI_RA007_Epitope_Rep1 1214.66190011518 1214.66080993586 66.295 2 -0.2673689053762181 0.06877041849938859 0.727227990133697 ['nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ASXL2|p.K444Rfs*3|1|0.05|ENSG00000143970|chr2:25750221-25750225|TTCTT/-|frameshift_variant', 'ASXL2|p.K569Nfs*11|1|0.24|ENSG00000143970|chr2:25749849-25749849|C/-|frameshift_variant'] 65750 12426 LSDDGSWTAY True H1975_Epitope_Rep3 1113.46146897313 1113.4608749679298 52.986 1 -0.2674169760723457 0.06877041849938859 0.7272835565156932 ['nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 98886 10760 SGVSLAALK True PC9_epitope_Rep4 844.50181766348 844.50072993586 49.145 2 -0.2674378883639047 0.06877041849938859 0.7273077241139076 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000168298|ENST00000304218|H1-4'] 120565 20103 VEGLQGVYV True PC9_epitope_Rep3 962.5072969667398 962.50618993586 82.578 2 -0.2674579665688522 0.06877041849938859 0.7273309246181566 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'ENST00000496420.5_1_7:92123531-92130970:-|nuORF'] 65154 7665 LQNTNNANGI True PC9_epitope_Rep2 1057.51523588149 1057.5141299358602 34.853 2 -0.26745980412400017 0.06877041849938859 0.7273330477707278 ['ENSG00000105849|ENST00000222567|POLR1F'] 1668 6716 AEGAAALAAA True H1975_Epitope_Rep2 814.4184819623399 814.41793496793 30.745 1 -0.267487722511654 0.06878615881590715 0.7273653021055915 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 6882 16333 AQIEAKFYEEV True PC9_epitope_Rep4 1325.6503323719699 1325.6492299358601 70.787 2 -0.267501494478276 0.06878615881590715 0.7273812107575378 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 94083 7243 RRLKHKRKK True PC9_epitope_Rep5 1248.83672564608 1248.8356299358602 32.824 2 -0.2675513678101308 0.06879813131866126 0.7274388095914737 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 71461 15571 LYTVQSDVW True NCI_RA007_Epitope_Rep4 1109.5393253710097 1109.53822993586 67.643 2 -0.26756005676743444 0.06879813131866126 0.7274488425314688 ['ENSG00000092445|ENST00000263798|TYRO3'] 108654 21339 SYPTFFPRF True PC9_epitope_Rep1 1160.5654805491997 1160.5643899358602 86.912 2 -0.26761437339325433 0.06879813131866126 0.7275115475286915 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 30409 19223 GAELVLRRFP True PC9_epitope_Rep1 1156.67167695324 1156.6705699358602 78.738 2 -0.267615434172309 0.06879813131866126 0.7275127719028613 ['ENST00000313478.11_1_15:50941001-50979001:-|nuORF'] 118358 12020 TYNKHINISF True PC9_epitope_Rep2 1235.62987171091 1235.62822490379 51.552 3 -0.2676420690242679 0.06879813131866126 0.7275435115890091 ['ENSG00000173451|ENST00000308086|THAP2'] 43512 13625 IGMEEHPEL True PC9_epitope_Rep1 1053.48009624273 1053.47898993586 57.265 2 -0.2676673994895997 0.06881512436358328 0.727572740800849 ['ENSG00000157483|ENST00000288235|MYO1E'] 33620 13541 GLGEETCSGNV True PC9_epitope_Rep5 1064.44443901 1064.4433499358602 57.107 2 -0.267703731570657 0.0688208140998741 0.7276146563319873 ['ENSG00000282936|ENST00000634965|unknown'] 77588 17980 NTDRSWLI True PC9_epitope_Rep4 1003.5086939490699 1003.50758993586 77.215 2 -0.26772631443198003 0.0688208140998741 0.7276407045732294 ['ENSG00000118997|ENST00000312428|DNAH7'] 64742 18817 LPYHVLLL True PC9_epitope_Rep2 966.59023874506 966.58914993586 77.75 2 -0.267790964768013 0.0688208140998741 0.7277152539447184 ['ENSG00000119714|ENST00000650645|GPR68'] 79022 10715 PALEGAAPVGT True H1975_Epitope_Rep2 981.5131106231698 981.51200993586 46.241 2 -0.26779520800766915 0.0688208140998741 0.7277201457713636 ['ENST00000466543.1_1_7:6210722-6211705:-|nuORF', 'ENST00000478541.1_1_7:6210722-6217545:-|nuORF'] 31058 4905 GATHVERCMVR True NCI_RA007_Epitope_Rep2 1257.60704517469 1257.6053849037899 23.701 3 -0.26780711250792444 0.0688208140998741 0.7277338691579596 ['nc|ENSG00000145016|Q92622-3|RUBCN'] 46958 15874 ITPGGFSSV True PC9_epitope_Rep1 863.43888305375 863.43833496793 65.868 1 -0.267819800803626 0.0688208140998741 0.727748494897379 ['ENSG00000087365|ENST00000322535|SF3B2'] 93716 14536 RQWRRRRRPQQ True NCI_RA007_Epitope_Rep2 1621.92504013985 1621.92394993586 61.205 2 -0.2678201690667863 0.0688208140998741 0.7277489193741425 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 96791 14788 SAQFHYLI True PC9_epitope_Rep2 977.4970666362099 977.49596993586 62.145 2 -0.2678522813006464 0.0688208140998741 0.7277859293806213 ['ENSG00000277481|ENST00000620267|PKD1L3'] 84439 6278 QAETVRWMKK True PC9_epitope_Rep2 1275.67577635751 1275.67414490379 29.544 3 -0.2678802499029821 0.0688208140998741 0.7278181573144678 ['ENST00000260604.8_1_2:55870335-55906871:-|nuORF'] 75986 11988 NLVMTPQG True PC9_epitope_Rep5 858.4269384710599 858.4263849679301 51.108 1 -0.2678827149549092 0.0688208140998741 0.72782099748051 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 45461 14345 IQLDKVNLQV True PC9_epitope_Rep5 1168.6815729306002 1168.6804699358602 60.178 2 -0.2679564566661164 0.06887429301222404 0.7279059391116963 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 35052 8695 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42883496793 38.808 1 -0.26798356254744876 0.06888876726324047 0.7279371513548557 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 114126 12131 TPHFSGLAA True PC9_epitope_Rep1 899.4501164437899 899.44900993586 51.524 2 -0.2680045572313575 0.06888876726324047 0.7279613227203686 ['ENSG00000178952|ENST00000313511|TUFM'] 125470 17305 VIVPLYDTL True NCI_RA007_Epitope_Rep4 1031.5902983147098 1031.58977496793 74.935 1 -0.2680063191408147 0.06888876726324047 0.7279633510685274 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 40398 10997 HQVKIGDFGL True NCI_RA007_Epitope_Rep4 1112.5978433066398 1112.59674993586 49.167 2 -0.26808631747651884 0.06894224103331266 0.7280554217938867 ['ENSG00000162434|ENST00000342505|JAK1'] 118466 13561 TYPKIWVKV True PC9_epitope_Rep6 1132.66446631448 1132.66282490379 63.893 3 -0.2681732435568864 0.06895796847635727 0.7281554100916069 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 126063 8833 VLEESLPP True PC9_epitope_Rep1 882.4698488288599 882.46874993586 38.817 2 -0.26818986059497674 0.06895796847635727 0.7281745175475205 ['nc|ENSG00000112769|Q16363-2|LAMA4', 'nc|ENSG00000112769|Q16363|LAMA4', 'ENSG00000112769|ENST00000230538|LAMA4'] 100260 22495 SIYGGFLLGV True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 94.758 2 -0.26819743456929185 0.0690114380575369 0.7281832259416468 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 97634 10808 SEFMFEKAP True NCI_RA007_Epitope_Rep4 1084.4899326504399 1084.4888299358602 48.419 2 -0.2683163241283366 0.06902590295512587 0.7283198650429096 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 16858 13478 EFELPKTM[Oxidation]NNS True H1975_Epitope_Rep3 1324.5969172805599 1324.5958099358602 57.118 2 -0.2683995784268802 0.06902590295512587 0.7284154843229537 ['ENSG00000089289|ENST00000356413|IGBP1'] 92032 4910 RKRTIVEEL True NCI_RA007_Epitope_Rep3 1142.6771562564998 1142.67550490379 26.303 3 -0.2684584432835097 0.06902590295512587 0.728483059823969 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 61617 19302 LKLVQLFV True PC9_epitope_Rep6 958.6215388733399 958.62044993586 86.892 2 -0.2684844822093447 0.06904288502581128 0.7285129434581319 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA', 'ENST00000562424.1_1_16:89805011-89806109:-|nuORF'] 58539 16222 LEQKDVNSL True PC9_epitope_Rep2 1044.54513902744 1044.5440499358601 67.644 2 -0.2687221616699673 0.06911458903359965 0.728785477356115 ['ENSG00000123545|ENST00000316149|NDUFAF4'] 57008 23593 LDRLRKKRHLL True H1975_Epitope_Rep2 1446.9259345732999 1446.92428490379 97.239 3 -0.2687338771043301 0.06913030789435284 0.7287988996407857 ['ENSG00000178605|ENST00000326153|GTPBP6'] 57280 9378 LDYVIRPAP True H1975_Epitope_Rep1 1042.5811306133398 1042.58002993586 40.982 2 -0.26874375341389195 0.06913030789435284 0.7288102140403205 ['ENSG00000100335|ENST00000325301|MIEF1'] 60329 13135 LGSLAALAAL True PC9_epitope_Rep5 898.5487678558999 898.54766993586 55.527 2 -0.2687989121670047 0.0691655266757866 0.7288733907761752 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'OCA2|p.Q609Pfs*8|1|0.13|ENSG00000104044|chr15:27955176-27955177|-/T|frameshift_variant'] 75238 14838 NIDQDINNL True PC9_epitope_Rep6 1057.5040024914501 1057.50290993586 69.048 2 -0.26892598324416084 0.06920074417247292 0.7290188448441022 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 75067 8852 NHVANSPVSI True PC9_epitope_Rep4 1036.53015766964 1036.5290699358602 41.58 2 -0.26894879848191505 0.0692359603844821 0.7290449476591089 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 33651 17256 GLGLWGVLL True PC9_epitope_Rep5 926.5589386167799 926.55784993586 71.387 2 -0.2689972420929691 0.06926991190793193 0.729100358633716 ['ENST00000261275.4_2_15:29413103-29413565:-|nuORF'] 75279 15678 NIINFDTSL True PC9_epitope_Rep2 1035.52367530687 1035.52256993586 65.582 2 -0.2690024606421931 0.06926991190793193 0.7291063266699008 ['nc|ENSG00000113851|Q96SW2-2|CRBN', 'ENSG00000113851|ENST00000231948|CRBN', 'ENST00000478353.1_1_3:3215741-3221371:-|nuORF', 'ENST00000492178.1_1_3:3214458-3216930:-|nuORF', 'ENST00000498700.5_1_3:3214275-3221371:-|nuORF'] 28561 4901 FSESKHTEP True H1975_Epitope_Rep2 1060.48253877088 1060.4814499358602 23.935 2 -0.26901593584224975 0.06930259702363584 0.7291217362160335 ['ENSG00000183354|ENST00000399933|KIAA2026', 'ENST00000540714.1_1_9:5919686-5933837:-|nuORF'] 55363 4180 LAEMWLEKNDP True NCI_RA007_Epitope_Rep2 1344.6383877892797 1344.63673490379 20.898 3 -0.269112052789108 0.06930259702363584 0.7292316105094137 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENST00000543813.1_1_15:101717595-101728206:-|nuORF'] 56005 8770 LASLEYSF True NCI_RA007_Epitope_Rep5 928.45419876472 928.45310993586 40.401 2 -0.26915061765297 0.06930259702363584 0.7292756754447501 ['ENST00000543940.1_1_12:124114818-124118191:-|nuORF'] 68642 9880 LTIGHKYPSKE True H1975_Epitope_Rep1 1271.68738658703 1271.68628993586 42.937 2 -0.26917867624342545 0.0693081944495095 0.7293077286032504 ['STOX1|p.Y782Lfs*9|1|0.29|ENSG00000165730|chr10:68886139-68886140|-/T|frameshift_variant', 'STOX1|p.L805Cfs*20|1|0.18|ENSG00000165730|chr10:68886206-68886206|G/-|frameshift_variant', 'ENSG00000165730|ENST00000298596|STOX1', 'STOX1|p.G417Vfs*55|1|0.25|ENSG00000165730|chr10:68885044-68885044|G/-|frameshift_variant'] 9237 17919 AVPDEIPPLE True PC9_epitope_Rep6 1078.55464108198 1078.55354993586 81.55 2 -0.26917919462846834 0.0693081944495095 0.7293083207319541 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 36728 6914 GVKFREHQFT True NCI_RA007_Epitope_Rep3 1247.64110510095 1247.63944490379 34.299 3 -0.2691924744563864 0.0693081944495095 0.7293234890052309 ['ENSG00000044524|ENST00000336596|EPHA3', 'nc|ENSG00000044524|P29320-2|EPHA3'] 109364 17579 TCMSLASQVV True PC9_epitope_Rep6 1037.48855275145 1037.48744993586 80.257 2 -0.26921194249783204 0.0693081944495095 0.7293457230563389 ['nc|ENSG00000064692|Q9Y6H5-4|SNCAIP', 'ENSG00000064692|ENST00000261368|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-3|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-5|SNCAIP', 'ENST00000512146.6_1_5:121736783-121799188:+|nuORF', 'nc|ENSG00000064692|Q9Y6H5-2|SNCAIP'] 54283 6264 KWVDKSVSSL True PC9_epitope_Rep6 1147.62372370131 1147.62208490379 32.597 3 -0.26921254795299626 0.0693081944495095 0.7293464144880522 ['ENSG00000198932|ENST00000537097|GPRASP1'] 125130 15567 VIFYFLLL True PC9_epitope_Rep1 1026.6153908637398 1026.6142899358601 64.702 2 -0.26922248454206676 0.0693081944495095 0.7293577617058692 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 54911 8078 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 40.572 3 -0.26926395018211247 0.0693081944495095 0.7294051058315179 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 53826 18971 KTETFFKEF True PC9_epitope_Rep3 1175.5862755634298 1175.5851699358602 78.195 2 -0.2692663170906912 0.0693081944495095 0.7294078078966991 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-2|RIOX2'] 103041 17841 SPFTVGVAA True PC9_epitope_Rep1 847.4439684341899 847.44286993586 73.419 2 -0.2692770452313226 0.0693081944495095 0.7294200546186653 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 78781 6661 PAAPAVSQA True PC9_epitope_Rep5 810.4235673427801 810.42246993586 30.593 2 -0.26928115190053226 0.0693081944495095 0.7294247423603204 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 75606 13594 NLDPLTETY True H1975_Epitope_Rep3 1064.50260550912 1064.5015099358602 57.575 2 -0.26936369014107403 0.06936163229582627 0.7295189321577139 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 18649 10272 EKYEQVEQY True H1975_Epitope_Rep1 1214.54553295026 1214.54442993586 44.455 2 -0.26940318383142026 0.06939683465830356 0.729563982687535 ['HCN3|p.K365E|1|0.34|ENSG00000143630|chr1:155285168-155285168|A/G|missense_variant'] 18997 8173 ELERFNKLV True H1975_Epitope_Rep2 1146.63970811862 1146.6386099358601 36.389 2 -0.26947323513868265 0.06941380253441518 0.7296438612114226 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 117802 8068 TVWNNWFYRRF True NCI_RA007_Epitope_Rep1 1587.77351625283 1587.7718849037901 35.381 3 -0.2695604995575937 0.06944773643043375 0.7297433155011199 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 38393 3819 HELQSRLNR True NCI_RA007_Epitope_Rep2 1151.61595298227 1151.61430490379 19.49 3 -0.2695762733203122 0.06944773643043375 0.7297612865172733 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 57010 22372 LDRLRKKRHLL True NCI_RA007_Epitope_Rep3 1446.9259345732999 1446.92428490379 97.227 3 -0.2695881158748145 0.0694634359787781 0.7297747774753857 ['ENSG00000178605|ENST00000326153|GTPBP6'] 62895 8239 LLNLSWQRM True NCI_RA007_Epitope_Rep1 1159.6171988522299 1159.61610993586 36.047 2 -0.26961497530729056 0.0694634359787781 0.7298053716173376 ['ENST00000480169.1_1_1:40205875-40207612:+|nuORF'] 106417 10818 STIHEKAMIQ True NCI_RA007_Epitope_Rep4 1156.5910436740398 1156.5899499358602 48.459 2 -0.2696843597311382 0.06949863263445762 0.7298843783833563 ['ENSG00000175267|ENST00000389398|VWA3A', 'nc|ENSG00000175267|A6NCI4-2|VWA3A'] 101961 16480 SLQENCDHVP True PC9_epitope_Rep1 1140.48697252832 1140.4858699358601 68.216 2 -0.26988613820171053 0.06957029042314634 0.7301139325239832 ['GRIK4|p.W289L|1|0.22|ENSG00000149403|chr11:120862080-120862080|G/T|missense_variant'] 67074 13991 LSQDQYLVY True H1975_Epitope_Rep2 1127.5498900547097 1127.5487899358602 58.965 2 -0.2699843287769916 0.06962117621322055 0.7302255279650316 ['nc|ENSG00000211456|Q9NTJ5-2|SACM1L'] 101057 10028 SLGERETLFQK True H1975_Epitope_Rep1 1306.6881148630198 1306.68646490379 43.511 3 -0.27000152504041436 0.06962117621322055 0.7302450643381336 ['AluJb_dup115673|chr19:17814641-17814928:+|1.0059209388849557|0.4649285931816585|1.11|527.0|9|2|sense'] 2947 9294 AFDKMCSKLPK True H1975_Epitope_Rep1 1266.6464503751802 1266.6453499358602 40.657 2 -0.270048954926059 0.06962117621322055 0.7302989370103727 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 29799 15078 FVPQEMGVHTV True PC9_epitope_Rep5 1242.6066937381797 1242.60558993586 63.005 2 -0.2702122854941832 0.06968393423498961 0.7304843240252465 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 8467 4924 ATQNSELIK True NCI_RA007_Epitope_Rep5 1002.5345743437399 1002.53346993586 25.64 2 -0.27021607457808317 0.06968393423498961 0.7304886224022715 ['ZFP2|p.R178Tfs*12|1|0.09|ENSG00000198939|chr5:178931842-178931843|-/A|frameshift_variant', 'ENSG00000198939|ENST00000361362|ZFP2'] 141110 12080 YSQRRFCP True NCI_RA007_Epitope_Rep3 1055.49708371955 1055.49598993586 54.637 2 -0.2702282223130888 0.06968393423498961 0.730502402191099 ['ENSG00000118496|ENST00000237281|FBXO30'] 85632 9823 QGLADNTVI True NCI_RA007_Epitope_Rep3 929.48181049489 929.48070993586 45.713 2 -0.27023514813084815 0.06968393423498961 0.7305102579970487 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 83225 8223 PSVPVRAP True PC9_epitope_Rep1 821.47593726881 821.47484993586 36.462 2 -0.2702694868808532 0.06968393423498961 0.730549202353877 ['ENST00000353258.7_1_16:19533228-19533372:-|nuORF'] 123672 14412 VGQSACVWCVP True H1975_Epitope_Rep2 1147.5154362056298 1147.5143299358601 60.587 2 -0.2703232850192766 0.06968393423498961 0.7306101981540412 ['ENST00000518067.5_1_8:25309047-25315927:-|nuORF'] 87449 6260 QPYRYTVKA True PC9_epitope_Rep3 1124.59784330664 1124.5961849037901 29.116 3 -0.27032479196326054 0.06968393423498961 0.7306119063979063 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 132735 22705 VVIDILQQI True PC9_epitope_Rep2 1039.62774645259 1039.62664993586 92.829 2 -0.2703292296310786 0.06968393423498961 0.7306169367566732 ['ENSG00000198920|ENST00000361413|KIAA0753', 'nc|ENSG00000198920|Q2KHM9-2|KIAA0753'] 82508 4709 PPRPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 24.658 2 -0.27041855305646584 0.06971911853161511 0.7307181585567024 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 45338 9983 IQDDAVHTL True PC9_epitope_Rep3 1010.50327421546 1010.50216993586 43.355 2 -0.27056419925908365 0.06977252843394575 0.7308830766638929 ['ENSG00000115816|ENST00000234170|CEBPZ'] 14683 13446 DVIEEYFK True NCI_RA007_Epitope_Rep2 1041.50187723313 1041.50137496793 56.944 1 -0.27072075484661473 0.0698623895015037 0.7310601695545004 ['ENSG00000112306|ENST00000230050|RPS12'] 77928 15234 NVKEMWTEV True PC9_epitope_Rep4 1134.53794547202 1134.5368499358601 66.526 2 -0.2707762559311877 0.06993274645962054 0.7311229071190863 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 111869 19300 TINISLSL True PC9_epitope_Rep5 859.50148331031 859.50038993586 79.283 2 -0.2708212163287322 0.06993274645962054 0.7311737126746286 ['ENSG00000123384|ENST00000243077|LRP1', 'nc|ENSG00000123384|Q07954-2|LRP1'] 29252 12101 FTYKFAEEIRR True NCI_RA007_Epitope_Rep4 1458.7619485096197 1458.76084993586 53.544 2 -0.27084955484373263 0.06994969745571189 0.7312057275833849 ['ENSG00000006757|ENST00000381042|PNPLA4'] 83276 6628 PTASLPAT True NCI_RA007_Epitope_Rep2 756.4017692690401 756.40122496793 30.392 1 -0.2709405776017101 0.06996664783393172 0.7313085180330059 ['ENST00000436467.3_1_2:73520434-73520539:-|nuORF'] 140591 23595 YRRAHRRFVTK True NCI_RA007_Epitope_Rep3 1488.8538322621996 1488.85272993586 102.35 2 -0.27105021357715414 0.0700382722799344 0.7314322454773393 ['ENSG00000116898|ENST00000373116|MRPS15', 'ENST00000477040.1_1_1:36921391-36921985:-|nuORF', 'ENST00000488606.5_1_1:36921391-36923601:-|nuORF'] 57934 9718 LEGITIVG True H1975_Epitope_Rep3 800.4643695256 800.46382496793 42.401 1 -0.271057078532404 0.07005394372357486 0.7314399897814867 ['ENSG00000181458|ENST00000323523|TMEM45A'] 103592 9538 SPSRAQLPSL True NCI_RA007_Epitope_Rep3 1054.5771078620598 1054.5760099358602 44.605 2 -0.2711045984182069 0.07005394372357486 0.7314935869119386 ['ENST00000389851.8_2_4:1341218-1341545:+|nuORF'] 107602 16408 SVPNKDVFQEL True PC9_epitope_Rep4 1274.65066672514 1274.6495699358602 71.075 2 -0.2711742161141097 0.07010222862036919 0.7315720773287775 ['ENSG00000115919|ENST00000264170|KYNU'] 14577 8229 DTVNVEIQA True H1975_Epitope_Rep2 987.4872897981498 987.48618993586 36.604 2 -0.2711789852112434 0.07010222862036919 0.7315774529137777 ['nc|ENSG00000140481|Q8N5R6|CCDC33', 'nc|ENSG00000140481|Q8N5R6-2|CCDC33', 'ENSG00000140481|ENST00000398814|CCDC33'] 24628 23153 FAISILQQL True PC9_epitope_Rep5 1031.60153170475 1031.6004299358601 94.047 2 -0.27118017117211857 0.07010222862036919 0.7315787896672719 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 92594 15975 RMQNTLYLS True PC9_epitope_Rep3 1124.5648289261999 1124.56372993586 66.594 2 -0.2711823581308113 0.07010222862036919 0.7315812546658643 ['ENSG00000153012|ENST00000382114|LGI2'] 82506 5578 PPRPPPPPP True PC9_epitope_Rep3 950.5337864980999 950.53268993586 26.534 2 -0.27119616549096137 0.07010222862036919 0.7315968166028467 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 2773 9015 AETSPAPIP True H1975_Epitope_Rep1 881.44944773745 881.4488949679301 39.581 1 -0.2712445592955744 0.07013611764062756 0.7316513487940373 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 72937 13690 MPYSGMTGA True PC9_epitope_Rep1 913.36737498961 913.36682496793 57.511 1 -0.2712798271368203 0.07013611764062756 0.7316910790400131 ['ENSG00000111816|ENST00000606080|FRK', 'nc|ENSG00000111816|P42685-2|FRK'] 131911 15648 VTRQQELVL True PC9_epitope_Rep1 1084.6240580544797 1084.62296993586 65.011 2 -0.2713313519274915 0.07015178294856143 0.7317491064643035 ['ENST00000595302.1_1_19:58864324-58864802:+|nuORF'] 41732 20779 IALSLPSPE True PC9_epitope_Rep1 925.51204799401 925.51094993586 84.756 2 -0.2713563885435834 0.07015178294856143 0.7317772956248108 ['nc|ENSG00000155846|Q86YN6-6|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-5|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-4|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-2|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-3|PPARGC1B', 'ENSG00000155846|ENST00000309241|PPARGC1B'] 116701 23528 TVDDLAFLL True PC9_epitope_Rep1 1005.53826274185 1005.53716993586 95.289 2 -0.27137774811173127 0.07016872562953246 0.731801341024085 ['nc|ENSG00000153093|Q9NUZ1-2|ACOXL', 'nc|ENSG00000153093|Q9NUZ1|ACOXL', 'ENSG00000153093|ENST00000439055|ACOXL'] 49039 4494 KEGKPPISV True H1975_Epitope_Rep1 953.5545815123298 953.55348993586 22.31 2 -0.2714810374557983 0.07022082938561329 0.7319175701822208 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'CLPTM1-AP1M1|1|fusion'] 119703 8819 VAVSGKGF True PC9_epitope_Rep2 763.4228390667898 763.42174993586 39.274 2 -0.27148324569767934 0.07022082938561329 0.7319200541954337 ['nc|ENSG00000165409|P16473-3|TSHR'] 116392 19375 TTIGDITLS True PC9_epitope_Rep1 919.4862271689901 919.48512993586 79.335 2 -0.27161084198207397 0.07032502550648594 0.7320635231447931 ['ENST00000462363.6_1_1:198608398-198672548:+|nuORF'] 110 10616 AAATATFAAA True PC9_epitope_Rep2 864.4341320264798 864.43302993586 46.149 2 -0.27163509587600815 0.07032502550648594 0.7320907804022181 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 64112 9581 LPEAFLCRSR True PC9_epitope_Rep2 1190.62301250866 1190.62190993586 42.197 2 -0.2716374597418737 0.07032502550648594 0.7320934367509518 ['ENST00000408957.4_1_2:233414953-233415175:-|nuORF'] 202 20539 AAFDGGFTV True PC9_epitope_Rep5 883.4075829254699 883.40648993586 84.047 2 -0.2716505285321273 0.07032502550648594 0.7321081217990365 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 67909 13527 LTCRWTEK True PC9_epitope_Rep1 1035.5171504577897 1035.51604993586 56.887 2 -0.2717348989306936 0.0703550543785182 0.7322028958516056 ['ENST00000500102.6_1_12:26109649-26110418:-|nuORF'] 33425 7873 GLAEVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44341496793 38.087 1 -0.2717802578633238 0.0703550543785182 0.7322538259993622 ['ENSG00000170684|ENST00000303809|ZNF296'] 97764 8110 SEITDTVAA True NCI_RA007_Epitope_Rep5 905.43419159613 905.43308993586 37.882 2 -0.2717915852112268 0.0703550543785182 0.7322665422341172 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 87654 10753 QQRRWQWVPVV True PC9_epitope_Rep3 1480.80515073428 1480.8034949037901 46.315 3 -0.27181684803872985 0.0703550543785182 0.7322948991796446 ['ENST00000346169.6_1_3:184052699-184052807:+|nuORF'] 104743 8799 SQVLSKWDP True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 38.771 2 -0.27182341902897694 0.0703550543785182 0.7323022741856706 ['ENSG00000253797|ENST00000521776|UTP14C'] 86656 13789 QLHCHPACL True PC9_epitope_Rep1 1020.4633410631199 1020.46224993586 57.884 2 -0.2718502078488476 0.0703694258233751 0.7323323375113285 ['ENSG00000175595|ENST00000311895|ERCC4', 'ENST00000576348.1_1_16:14014055-14020614:+|nuORF', 'nc|ENSG00000175595|Q92889-2|ERCC4'] 55528 19376 LAGPAELL True PC9_epitope_Rep4 782.4538048418999 782.4532549679301 82.639 1 -0.2718549475882129 0.0703694258233751 0.7323376560513875 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 15888 13686 EDISMKFDELY True H1975_Epitope_Rep2 1388.6169836383601 1388.6158899358602 57.785 2 -0.2718638355726738 0.0703694258233751 0.7323476289548371 ['nc|ENSG00000080845|Q9Y2H0-1|DLGAP4', 'ENSG00000080845|ENST00000339266|DLGAP4', 'nc|ENSG00000080845|Q9Y2H0-3|DLGAP4'] 82304 5655 PPHPPPPPP True PC9_epitope_Rep5 931.49158733295 931.49048993586 26.751 2 -0.2718903585933262 0.07040457584203144 0.7323773860323778 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 119687 15946 VAVLQEVAA True PC9_epitope_Rep4 898.5123823471798 898.51128993586 69.263 2 -0.2719608057584907 0.07041766088049398 0.7324563976883679 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENST00000466110.5_1_2:74592577-74593714:-|nuORF'] 72573 14989 MLPHSSFSL True PC9_epitope_Rep2 1017.4953523840501 1017.49424993586 62.912 2 -0.27200337386716217 0.07041766088049398 0.7325041230677827 ['ENST00000235382.6_1_1:192781079-192781220:+|nuORF'] 20473 20842 EPIPYEFMA True PC9_epitope_Rep4 1095.49468367771 1095.4935899358602 88.322 2 -0.2720739343885947 0.07041766088049398 0.7325832026302009 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 101363 5249 SLITVSAAK True NCI_RA007_Epitope_Rep5 888.5280324113199 888.52692993586 26.887 2 -0.27211298155293523 0.07041766088049398 0.7326269482563997 ['ENST00000474863.5_1_1:222885158-222885545:-|nuORF'] 58378 5981 LENLSTASS True H1975_Epitope_Rep2 920.4450906330001 920.44454496793 27.985 1 -0.2721871289864966 0.0704528068194237 0.7327099866591615 ['RASAL2|p.Q869Rfs*10|1|0.08|ENSG00000075391|chr1:178458318-178458318|C/-|frameshift_variant', 'ENSG00000075391|ENST00000367649|RASAL2', 'nc|ENSG00000075391|Q9UJF2|RASAL2'] 67734 11928 LSYDYHSP True PC9_epitope_Rep2 980.4239612655999 980.42286993586 51.204 2 -0.272240211326571 0.07048666763805916 0.7327694091339226 ['ENSG00000166926|ENST00000684409|MS4A6E'] 93303 7714 RPRVTEPISA True PC9_epitope_Rep1 1124.6302060640799 1124.62855490379 34.492 3 -0.2722552332126613 0.07048666763805916 0.7327862214564381 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 106768 18402 SVAAQLTGV True PC9_epitope_Rep3 844.4654321547599 844.46432993586 75.991 2 -0.27236914899901293 0.0705205259898736 0.7329136606333563 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 101669 11873 SLLVMKMHQLK True NCI_RA007_Epitope_Rep1 1326.7515841500601 1326.75048993586 50.166 2 -0.27240133915209 0.0705205259898736 0.7329496549202481 ['ENST00000443101.6_1_7:112077294-112095874:+|nuORF', 'ENST00000476927.5_1_7:112091109-112095874:+|nuORF'] 94528 21015 RRRRTRKSWLG True NCI_RA007_Epitope_Rep1 1470.8756303359398 1470.8745299358602 85.997 2 -0.272435856039044 0.07053231592941304 0.7329882424589124 ['AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 3180 10014 AGEDCGEEVP True PC9_epitope_Rep5 1004.3756907438399 1004.37458993586 43.496 2 -0.2724560908355817 0.07053231592941304 0.73301085952732 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 28141 15086 FRDAFTQEL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 70.085 2 -0.272458519143799 0.07053231592941304 0.7330135735221195 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 106529 9100 STLPKSLSL True PC9_epitope_Rep6 944.55424715916 944.55314993586 45.088 2 -0.2724639673788369 0.07053231592941304 0.7330196625760994 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 16521 12309 EELLQLKAIHQ True H1975_Epitope_Rep1 1320.74015043588 1320.73904993586 52.373 2 -0.2725034335913138 0.07053231592941304 0.7330637642958492 ['ENSG00000135968|ENST00000309863|GCC2'] 27972 16669 FQGVEFHYV True PC9_epitope_Rep6 1124.5290950404801 1124.5279899358602 76.586 2 -0.27256777950639205 0.07054795767850965 0.7331356435306228 ['ENSG00000143815|ENST00000272163|LBR'] 70151 12937 LVPPDQPEV True PC9_epitope_Rep6 992.51786165044 992.51676993586 61.306 2 -0.2725678880825337 0.07054795767850965 0.733135764792778 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 68568 15956 LTGTWTSV True PC9_epitope_Rep1 863.43888305375 863.43778993586 66.184 2 -0.2726044100791071 0.07056488327202536 0.7331765491273013 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 101002 4582 SLFWLFIT True NCI_RA007_Epitope_Rep5 1025.5586042636098 1025.55750993586 24.286 2 -0.2726851080675573 0.07060001820996085 0.7332666305602735 ['ENST00000430297.6_2_2:220048236-220048374:+|nuORF'] 76624 14856 NQQLLQLE True PC9_epitope_Rep5 984.52400966004 984.5234649679301 62.145 1 -0.2727551631605097 0.07065336149755991 0.7333447931081957 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 70611 25349 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 104.88 3 -0.27283051366455235 0.07072491214013875 0.7334288240994165 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 79927 6113 PERLAVTTA True H1975_Epitope_Rep2 956.52909504048 956.52798993586 28.492 2 -0.2728739683451673 0.07073410530915447 0.7334772660997283 ['ENSG00000085465|ENST00000369732|OVGP1'] 86824 13581 QLQAELRSL True PC9_epitope_Rep1 1056.5927579262 1056.5916699358602 57.095 2 -0.27288126729694057 0.07073410530915447 0.7334854014147185 ['ENST00000576487.5_1_17:7011095-7018009:-|nuORF', 'nc|ENSG00000161944|P07307-3|ASGR2', 'nc|ENSG00000161944|P07307-2|ASGR2', 'ENSG00000161944|ENST00000691900|ASGR2', 'nc|ENSG00000161944|P07307|ASGR2'] 34543 10320 GPSGLLTYT True H1975_Epitope_Rep3 907.4650978015901 907.46400993586 44.748 2 -0.27289225465946193 0.07073410530915447 0.7334976470561376 ['ENSG00000159348|ENST00000367249|CYB5R1'] 80874 10612 PHTLGFTA True PC9_epitope_Rep2 842.42865272322 842.42754993586 46.133 2 -0.27292085583291525 0.07073410530915447 0.7335295195547964 ['FUT3|p.R304Pfs*191|1|0.09|ENSG00000171124|chr19:5843929-5843930|-/G|frameshift_variant'] 120146 17018 VEALIALT True PC9_epitope_Rep5 828.49566965388 828.49456993586 70.478 2 -0.2729347878389726 0.07073410530915447 0.7335450429230426 ['ENST00000458412.1_2_15:44093902-44094001:+|nuORF', 'ENSG00000242028|ENST00000442995|HYPK'] 114403 18715 TPSTLALSV True PC9_epitope_Rep3 887.49639792987 887.49530993586 77.212 2 -0.2729455071233521 0.07073410530915447 0.7335569856461585 ['ENST00000487233.1_1_2:217364074-217364125:+|nuORF', 'ENST00000427280.6_1_2:217364074-217364681:+|nuORF'] 116 10946 AAATPVRR True PC9_epitope_Rep1 840.49298431528 840.49188993586 46.992 2 -0.27296472433264596 0.07073410530915447 0.7335783941207111 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 93080 7391 RPNDSRMLVA True PC9_epitope_Rep1 1157.59752603681 1157.59588490379 33.243 3 -0.27301858287496716 0.07078485990496478 0.7336383797376171 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 55119 13665 LAAATATFAAA True PC9_epitope_Rep6 977.5181960036099 977.51708993586 64.349 2 -0.27308488716228924 0.07078485990496478 0.7337121982286569 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 31716 7247 GEGPAALGA True H1975_Epitope_Rep2 741.36571811349 741.36516496793 32.81 1 -0.2730923719478495 0.07078485990496478 0.7337205292690306 ['ENSG00000185085|ENST00000330574|INTS5', 'INTS5|p.E601Nfs*21|1|0.24|ENSG00000185085|chr11:62648279-62648279|C/-|frameshift_variant'] 103980 20068 SQAPFIVAL True PC9_epitope_Rep6 944.5331177917599 944.53256496793 89.86 1 -0.27322323006381033 0.07085639382464316 0.7338661175696237 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 70636 23460 LWHIWRERN True NCI_RA007_Epitope_Rep4 1308.68397297244 1308.68233490379 101.81 3 -0.27328045125615963 0.07087201893318769 0.733929741315782 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 119965 11390 VDNYYRLVTER True PC9_epitope_Rep5 1426.7204776204596 1426.71883490379 48.81 3 -0.2732826439414512 0.07087201893318769 0.7339321788769465 ['nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1', 'ENSG00000204956|ENST00000517417|PCDHGA1'] 142306 11903 YYDPHQATF True PC9_epitope_Rep2 1140.48762415132 1140.48652993586 51.109 2 -0.2734084543684307 0.07092534270266335 0.7340719820578285 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 69778 6465 LVFRNGDA True PC9_epitope_Rep4 890.4610154806599 890.45990993586 31.976 2 -0.2734151307445056 0.0709409644475998 0.7340793978287381 ['ENSG00000183066|ENST00000328823|WBP2NL'] 8466 5248 ATQNSELIK True NCI_RA007_Epitope_Rep4 1002.5345743437399 1002.53346993586 26.727 2 -0.2734906666305199 0.0709409644475998 0.7341632770310219 ['ZFP2|p.R178Tfs*12|1|0.09|ENSG00000198939|chr5:178931842-178931843|-/A|frameshift_variant', 'ENSG00000198939|ENST00000361362|ZFP2'] 77628 8580 NTEPVETSSP True NCI_RA007_Epitope_Rep5 1059.47203365683 1059.47147496793 39.683 1 -0.27353405393288827 0.07095658505506508 0.7342114383153264 ['PLXDC2|p.R391P|1|0.24|ENSG00000120594|chr10:20217475-20217475|G/C|missense_variant'] 93298 4496 RPRRRPRRWLK True NCI_RA007_Epitope_Rep2 1575.9810984639896 1575.9800099358602 22.119 2 -0.2735354711874074 0.07095658505506508 0.7342130112871577 ['ENST00000251102.12_1_16:57965650-57974178:-|nuORF'] 30801 6516 GANPVEIR True PC9_epitope_Rep1 854.46101548066 854.45990993586 29.867 2 -0.27354793245195774 0.07097091266518621 0.7342268410877095 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000429127.2_1_12:8167969-8168583:+|nuORF', 'nc|ENSG00000144381|P10809-2|HSPD1', 'ENST00000461097.1_1_2:198361816-198363572:-|nuORF', 'ENST00000388967.3_1_3:36809324-36810203:-|nuORF'] 102411 13236 SLTLLQSNT True PC9_epitope_Rep5 975.52367530687 975.52256993586 55.92 2 -0.27355316625499676 0.07097091266518621 0.7342326493548041 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'nc|ENSG00000166473|Q7Z442-4|PKD1L2', 'ENST00000299598.11_1_16:81199358-81222588:-|nuORF', 'nc|ENSG00000166473|Q7Z442-3|PKD1L2', 'ENST00000533478.5_1_16:81174978-81214887:-|nuORF', 'nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 102574 16553 SLVYFHCSAL True PC9_epitope_Rep1 1138.5481162329002 1138.54648490379 68.493 3 -0.2735803669969162 0.07097091266518621 0.7342628325272725 ['nc|ENSG00000103310|Q05996-2|ZP2', 'ENSG00000103310|ENST00000574091|ZP2'] 36437 17680 GVGAVNISV True PC9_epitope_Rep3 814.45486747106 814.45376993586 73.202 2 -0.2736235484578661 0.07098653076083 0.7343107378449171 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 56660 15943 LDIYASQVT True PC9_epitope_Rep2 1008.5127762699999 1008.51166993586 66.573 2 -0.27362359631324934 0.07098653076083 0.7343107909281282 ['ENST00000508041.1_1_3:134332031-134343939:-|nuORF', 'nc|ENSG00000174611|Q8NBH2-3|KY', 'ENSG00000174611|ENST00000423778|KY'] 67607 7546 LSVKWDVDDP True NCI_RA007_Epitope_Rep2 1172.57135377528 1172.5702499358601 33.978 2 -0.27364292879234187 0.07102034873138946 0.734332234002406 ['NALCN|p.E1234D|1|0.4|ENSG00000102452|chr13:101082872-101082872|C/A|missense_variant'] 82536 5014 PPRVAAVAA True PC9_epitope_Rep4 850.5024863698197 850.50138993586 25.91 2 -0.2736828440462946 0.07102034873138946 0.7343764985711314 ['ENST00000311234.8_1_13:52025275-52027034:-|nuORF'] 100833 11991 SLELERARSE True H1975_Epitope_Rep1 1188.6098645423197 1188.6087699358602 51.131 2 -0.2737205772274447 0.07103725679340407 0.7344183329342544 ['ENSG00000162069|ENST00000572449|BICDL2', 'nc|ENSG00000162069|A1A5D9-2|BICDL2'] 79140 7023 PALQRLDFSVR True NCI_RA007_Epitope_Rep5 1300.72516907808 1300.7235149037901 33.693 3 -0.2737824085134894 0.0710515779128599 0.7344868628503206 ['nc|ENSG00000141699|Q86VR2-2|RETREG3', 'ENSG00000141699|ENST00000309428|RETREG3'] 74440 10748 NEVANFDLA True H1975_Epitope_Rep3 991.4610750503099 991.46052496793 46.421 1 -0.27378283088029354 0.0710515779128599 0.7344873308823617 ['CT47B1|p.A103V|1|0.5|ENSG00000236446|chrX:120875363-120875363|G/A|missense_variant'] 140115 14855 YQNQGIYQV True PC9_epitope_Rep5 1111.52982331647 1111.52927496793 62.141 1 -0.2738091558939329 0.0710515779128599 0.7345164996070487 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 120229 9702 VEASTQFKKKQ True H1975_Epitope_Rep3 1292.7088503076 1292.7077499358602 42.341 2 -0.2738366411824882 0.07108538982310549 0.7345469487299912 ['nc|ENSG00000074803|Q13621-3|SLC12A1', 'ENSG00000074803|ENST00000380993|SLC12A1'] 34743 5897 GQEVNELKT True PC9_epitope_Rep3 1016.51383889916 1016.51274993586 27.746 2 -0.27383719690274777 0.07108538982310549 0.7345475643206033 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 84398 18053 QAAQLLQV True PC9_epitope_Rep1 869.49706663621 869.49596993586 74.235 2 -0.2738535532456896 0.0711022948552294 0.734565681835059 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 119554 6101 VASVVDVAK True H1975_Epitope_Rep3 886.5123823471798 886.51128993586 28.479 2 -0.27392946201619933 0.07111919927206552 0.7346497394521228 ['ENSG00000167676|ENST00000301286|PLIN4'] 114549 9920 TQAQGLTNV True PC9_epitope_Rep3 930.4770594676199 930.47596993586 43.114 2 -0.27404528786945226 0.07115430110462048 0.7347779212980088 ['nc|ENSG00000130731|Q96S19-6|METTL26', 'ENSG00000130731|ENST00000301686|METTL26', 'nc|ENSG00000130731|Q96S19-4|METTL26', 'ENST00000448973.6_1_16:685482-685995:-|nuORF'] 91844 20176 RKKKLKKKKTL True NCI_RA007_Epitope_Rep4 1397.9922232279696 1397.99056490379 87.302 3 -0.2740908338733695 0.07116602372807337 0.7348283002820046 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 102002 6635 SLQPRPWRK True NCI_RA007_Epitope_Rep2 1166.6672602791398 1166.6656049037902 30.42 3 -0.27409297427569296 0.07116602372807337 0.7348306674498554 ['ENSG00000187833|ENST00000409561|C2orf78'] 81944 10376 PLSSSSLEIP True H1975_Epitope_Rep1 1028.5389910178399 1028.5378899358602 44.861 2 -0.2741036766918189 0.07116602372807337 0.7348425032560498 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'ENST00000487397.1_1_3:180327676-180328522:+|nuORF'] 121526 7894 VFAIGQVK True NCI_RA007_Epitope_Rep1 860.51198842436 860.51088993586 34.698 2 -0.27419345909926596 0.07116602372807337 0.7349417621539771 ['ENST00000536573.6_1_12:1213918-1353789:+|nuORF'] 47198 5255 IVAEKEHRL True NCI_RA007_Epitope_Rep1 1093.6243924076498 1093.6232899358602 24.523 2 -0.27419908323447706 0.07116602372807337 0.7349479780423551 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ABCA2|p.R973Afs*36|1|0.26|ENSG00000107331|chr9:137016581-137016581|C/-|frameshift_variant'] 19910 9701 ELVAEEDQDP True H1975_Epitope_Rep2 1143.4931630242297 1143.4920699358602 42.299 2 -0.27424516995599807 0.07118162960806435 0.7349989055573082 ['ENSG00000239697|ENST00000293825|TNFSF12', 'nc|ENSG00000239697|O43508-2|TNFSF12'] 29121 11743 FTLPRRPGP True H1975_Epitope_Rep3 1039.5926983565498 1039.59160993586 50.312 2 -0.27428015833368363 0.07118162960806435 0.7350375591236303 ['ENST00000397821.7_1_X:19854391-19905523:-|nuORF'] 69062 12253 LTQPHFMAL True PC9_epitope_Rep1 1056.54263692964 1056.5415299358601 51.991 2 -0.2743628642317189 0.07121413365841232 0.7351288950119877 ['nc|ENSG00000147044|O14936-3|CASK', 'nc|ENSG00000147044|O14936-4|CASK', 'nc|ENSG00000147044|O14936-6|CASK', 'nc|ENSG00000147044|O14936-2|CASK', 'ENSG00000147044|ENST00000378163|CASK', 'nc|ENSG00000147044|O14936-5|CASK'] 113611 4879 TLVLSRSLT True NCI_RA007_Epitope_Rep3 988.59169529704 988.59058993586 26.176 2 -0.2743801624759091 0.07121413365841232 0.735147992247974 ['ENSG00000214456|ENST00000381848|PLIN5'] 142042 6266 YVLMDGDH True NCI_RA007_Epitope_Rep4 948.4011176460399 948.40002993586 30.706 2 -0.2743917380414138 0.07121413365841232 0.7351607704967007 ['FAT2|p.A968D|1|0.14|ENSG00000086570|chr5:151566029-151566029|G/T|missense_variant'] 61451 14522 LIYGHWSI True PC9_epitope_Rep4 987.51780208079 987.51670993586 63.773 2 -0.27445479570822 0.07122973636810218 0.7352303634598866 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF', 'ENST00000511584.2_1_19:19627047-19637070:+|nuORF'] 80572 11203 PGPSASSLL True PC9_epitope_Rep5 827.43888305375 827.43778993586 48.081 2 -0.27451638356832053 0.07122973636810218 0.7352983077384763 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 64982 15378 LQGTGPVEFT True PC9_epitope_Rep5 1047.52367530687 1047.52256993586 64.16 2 -0.27464938752899365 0.07126353133812426 0.7354449496266422 ['SCAP|p.P50Q|1|0.26|ENSG00000114650|chr3:47435111-47435111|G/T|missense_variant'] 38991 18379 HHLVIPSVL True PC9_epitope_Rep5 1013.6022004110899 1013.60110993586 75.713 2 -0.2746620513652336 0.07126353133812426 0.7354589056345526 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 87286 13892 QPQLPYSQA True PC9_epitope_Rep3 1030.5083595959 1030.5072699358602 58.515 2 -0.27469616593402085 0.07129732384885477 0.735496495646499 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 18683 5984 ELAGANRQ True NCI_RA007_Epitope_Rep2 857.4355290088099 857.43442993586 27.887 2 -0.27473116510212103 0.07129732384885477 0.7355350520726258 ['nc|nan|Q8WYQ4-2|C22orf15'] 109966 5471 TEHWWHVRREP True H1975_Epitope_Rep1 1531.74327875371 1531.74163490379 26.105 3 -0.2748027815268797 0.07133111390056214 0.7356139212978451 ['nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27', 'ENSG00000159314|ENST00000685559|ARHGAP27', 'nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27', 'ENST00000531735.5_1_17:43481393-43507645:-|nuORF'] 36554 19376 GVGWTLLL True H1975_Epitope_Rep1 857.5010893874899 857.5005449679301 80.711 1 -0.274810406934005 0.07133111390056214 0.7356223168827132 ['ENST00000577830.5_2_17:55938859-55939276:-|nuORF'] 81855 20174 PLQQISVSL True PC9_epitope_Rep5 983.56514619603 983.56404993586 82.647 2 -0.27486979736872325 0.07133892354984812 0.7356876922323257 ['ENST00000607802.1_1_20:61640736-61711710:+|nuORF'] 70179 4449 LVQADEKEANV True NCI_RA007_Epitope_Rep2 1214.6142812164198 1214.6131899358602 21.939 2 -0.2749291007915887 0.07133892354984812 0.7357529477635564 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 29162 20088 FTQDSNYLL True PC9_epitope_Rep5 1099.51858992643 1099.51807496793 82.319 1 -0.2749476674989449 0.07133892354984812 0.7357733730256482 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 43899 10116 IHYVLEPIYAK True NCI_RA007_Epitope_Rep1 1344.7441731871597 1344.7430699358601 43.359 2 -0.27499540257419197 0.07133892354984812 0.7358258756727926 ['ENSG00000150433|ENST00000682305|TMEM218', 'ENST00000527257.1_1_11:124967504-124971231:-|nuORF'] 137679 4156 YEKDDKLTP True NCI_RA007_Epitope_Rep4 1107.54480467427 1107.54370993586 22.279 2 -0.2750863919106057 0.07133892354984812 0.7359259097069134 ['ENSG00000092820|ENST00000367075|EZR'] 79126 5482 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 27.84 2 -0.2751013911557269 0.07133892354984812 0.735942394538601 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 102248 6596 SLSGPELPPP True H1975_Epitope_Rep2 992.51786165044 992.51676993586 30.282 2 -0.2752202897672578 0.07133892354984812 0.7360730154282145 ['ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 16431 14085 EEKRQLSL True PC9_epitope_Rep6 1001.5505587610498 1001.54946993586 66.05 2 -0.27524453557188305 0.07133892354984812 0.7360996399027373 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 132671 16346 VVGGIYGV True PC9_epitope_Rep4 762.42759009406 762.4270449679301 70.84 1 -0.2752480235386076 0.07135451717928663 0.7361034697348634 ['ENSG00000167658|ENST00000309311|EEF2'] 58191 10197 LELDDAIR True PC9_epitope_Rep1 943.49746055903 943.49636993586 44.101 2 -0.27526119595575027 0.07135451717928663 0.7361179324768266 ['ENSG00000124237|ENST00000371168|C20orf85'] 99609 21702 SIFEVAFLLI True PC9_epitope_Rep1 1150.66379760814 1150.6627099358602 88.307 2 -0.27533051311666057 0.0713701096742511 0.7361940204266436 ['ENSG00000152661|ENST00000282561|GJA1', 'GJA1|p.R299Afs*49|1|0.28|ENSG00000152661|chr6:121447741-121447741|C/-|frameshift_variant'] 73179 6075 MRVSDRQQL True PC9_epitope_Rep3 1131.5818759726699 1131.5802449037901 28.417 3 -0.27539847666184053 0.0713701096742511 0.7362685911268945 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.R703Kfs*32|1|0.49|ENSG00000171681|chr12:14457240-14457241|-/A|frameshift_variant'] 83678 16661 PVEVQEVSL True PC9_epitope_Rep6 998.5284263341398 998.5273299358599 76.556 2 -0.27540897217166554 0.0713869993816158 0.7362801042014921 ['nc|ENSG00000141425|Q96P16-3|RPRD1A', 'ENSG00000141425|ENST00000399022|RPRD1A'] 106686 7819 STTPLLAWSP True H1975_Epitope_Rep2 1071.56006081559 1071.5589699358602 35.023 2 -0.2754514195029542 0.07140388847461943 0.7363266593573582 ['IGSF3|p.K1161Rfs*33|1|0.26|ENSG00000143061|chr1:116577417-116577417|C/-|frameshift_variant'] 61307 6215 LIQQWMVP True H1975_Epitope_Rep3 1013.53682327321 1013.53572993586 28.92 2 -0.27548085546655376 0.0714207769532955 0.7363589368766501 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 90006 7810 RDQEEERRERW True NCI_RA007_Epitope_Rep3 1587.7502146089496 1587.7491099358601 37.84 2 -0.2755867367175358 0.07143636562033973 0.7364749912344525 ['ENSG00000159450|ENST00000614923|TCHH'] 111797 14910 TILDAIKNI True PC9_epitope_Rep2 999.59644632431 999.59534993586 62.615 2 -0.27558874535154426 0.07143636562033973 0.736477192134055 ['ENSG00000221944|ENST00000408957|TIGD1', 'Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|63|3|sense'] 95595 13057 RWWFRRLFLIF True PC9_epitope_Rep4 1638.9299573245796 1638.9288699358601 58.118 2 -0.2756667295712992 0.0714714387036936 0.736562620151132 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 68359 9667 LTEPPLNTP True PC9_epitope_Rep1 980.51786165044 980.51676993586 42.04 2 -0.27569821940943806 0.07148312481815537 0.7365971042849624 ['ENSG00000115091|ENST00000263238|ACTR3', 'ACTR3|p.L111V|1|0.19|ENSG00000115091|chr2:113927450-113927450|C/G|missense_variant', 'ENST00000489779.1_1_2:114684960-114691984:+|nuORF'] 111924 19644 TIPNNLIGC True PC9_epitope_Rep3 943.47970231991 943.47860993586 80.798 2 -0.2757579505207802 0.07148312481815537 0.7366624969581608 ['ENSG00000169564|ENST00000303577|PCBP1'] 101071 12303 SLGFLLAT True H1975_Epitope_Rep2 820.4694549060399 820.46834993586 52.407 2 -0.27579285230632683 0.07148312481815537 0.7367006959033972 ['nc|ENSG00000197858|O43292-2|GPAA1', 'ENSG00000197858|ENST00000355091|GPAA1', 'ENST00000530796.1_1_8:145140395-145141025:+|nuORF', 'ENST00000529638.1_1_8:145140125-145141025:+|nuORF', 'ENST00000534072.1_1_8:145139936-145140713:+|nuORF'] 42249 3421 IDSYRCFQPKQ True NCI_RA007_Epitope_Rep1 1383.6605202161898 1383.65887490379 17.206 3 -0.2758388616065199 0.07148312481815537 0.7367510393336312 ['ENSG00000169188|ENST00000374987|APEX2'] 44445 24231 ILIDWLVQV True PC9_epitope_Rep5 1097.64848189717 1097.64738993586 98.21 2 -0.27586324911092575 0.07148312481815537 0.736777718479083 ['ENSG00000134057|ENST00000256442|CCNB1', 'nc|ENSG00000134057|P14635-2|CCNB1'] 44971 18459 IPAKITVTI True PC9_epitope_Rep2 954.61136811246 954.61026993586 76.336 2 -0.2759029161791557 0.07150000909206626 0.7368211045638337 ['nc|ENSG00000172534|P51610-4|HCFC1'] 58111 12142 LEKHYLDI True PC9_epitope_Rep1 1029.5494961318898 1029.54838993586 51.566 2 -0.2759729896640208 0.07151689275193658 0.7368977224190779 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 42683 15776 IEIPSVVSV True H1975_Epitope_Rep1 941.54334812229 941.54279496793 65.989 1 -0.2760457243653488 0.0715493572376675 0.7369772157557298 ['ZBTB20|p.I383*|1|0.24|ENSG00000181722|chr3:114350932-114350932|G/-|frameshift_variant', 'nc|ENSG00000181722|Q9HC78-2|ZBTB20', 'ZBTB20|p.P692Lfs*43|1|0.14|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant', 'ENSG00000181722|ENST00000675478|ZBTB20'] 49483 8292 KFDFSDEEIMA True NCI_RA007_Epitope_Rep2 1330.57511882638 1330.5740299358602 36.893 2 -0.27609411515010873 0.0715493572376675 0.737030083795334 ['nc|ENSG00000038532|Q2KHT3-2|CLEC16A', 'ENSG00000038532|ENST00000409790|CLEC16A'] 57658 3783 LEEERIQHQQK True NCI_RA007_Epitope_Rep2 1436.7371903137598 1436.73553490379 19.354 3 -0.2760972645276918 0.0715493572376675 0.7370335240285986 ['nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1'] 140772 12091 YSDGLGGNSLY True H1975_Epitope_Rep3 1144.5036681382799 1144.50307496793 51.673 1 -0.2761223012547065 0.07157921530126177 0.7370608706632613 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 127485 12296 VNLLREQL True PC9_epitope_Rep4 983.5763795860698 983.57528993586 55.111 2 -0.27616085910903043 0.07157921530126177 0.7371029778431833 ['CON__Q6IFU5', 'ENSG00000204889|ENST00000377755|KRT40', 'chr17:40981151-40982307|122|12.53|0.36|5.14|-|0|KRT40,KRT40|1'] 82118 11736 PNDMMREIRK True NCI_RA007_Epitope_Rep1 1288.6380109497998 1288.63690993586 49.625 2 -0.2761630636031509 0.07157921530126177 0.7371053849704228 ['nc|ENSG00000116141|Q9P0L2-2|MARK1', 'nc|ENSG00000116141|Q9P0L2-3|MARK1', 'ENSG00000116141|ENST00000366917|MARK1'] 110601 8709 TFTAYDTSRR True PC9_epitope_Rep3 1216.58364979448 1216.5820049037902 38.453 3 -0.27619955824545894 0.07157921530126177 0.7371452295039599 ['ENST00000304788.3_1_20:25596948-25597023:-|nuORF'] 6511 5436 APTASTVSA True PC9_epitope_Rep1 803.40249754503 803.40140993586 25.743 2 -0.2762142366900971 0.07157921530126177 0.7371612528410584 ['ENST00000338302.7_1_1:156876157-156878457:+|nuORF'] 64538 19257 LPRQVELL True PC9_epitope_Rep5 966.5862159937799 966.58510993586 79.113 2 -0.27630653415005535 0.07161427558496809 0.7372619746263925 ['nc|ENSG00000113108|O95704-3|APBB3', 'nc|ENSG00000113108|O95704-2|APBB3', 'ENSG00000113108|ENST00000357560|APBB3', 'nc|ENSG00000113108|O95704-4|APBB3', 'ENST00000515056.5_1_5:139938172-139941333:-|nuORF', 'ENST00000509914.5_1_5:139938172-139941496:-|nuORF'] 27745 9968 FPSAAATAA True PC9_epitope_Rep2 805.39701824177 805.39592993586 43.672 2 -0.27637236824217853 0.07164803199709117 0.7373337836391453 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 66316 16559 LSFTAEHLV True PC9_epitope_Rep1 1015.53384606775 1015.53274993586 68.516 2 -0.2764508504408568 0.07164803199709117 0.7374193517722326 ['ENSG00000145283|ENST00000273905|SLC10A6'] 108724 13521 SYRLAFGG True PC9_epitope_Rep5 869.4395517600898 869.43844993586 57.03 2 -0.2764836699725163 0.07171293014124448 0.7374551226100838 ['DCHS1|p.S1586F|1|0.18|ENSG00000166341|chr11:6630037-6630037|G/A|missense_variant'] 9886 15795 AYLKAIVLF True NCI_RA007_Epitope_Rep5 1036.6321035570397 1036.6310099358602 67.476 2 -0.27650594819165014 0.07171293014124448 0.7374794002197966 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 3655 8009 AGPSLPPPAA True PC9_epitope_Rep4 876.4705175351999 876.46942993586 38.255 2 -0.27653229427463777 0.07171293014124448 0.737508106614397 ['ENST00000455843.5_1_22:19705679-19706159:+|nuORF'] 47035 9381 ITRPENISA True PC9_epitope_Rep5 999.53490869691 999.53380993586 41.039 2 -0.27654080188494073 0.07171293014124448 0.7375173754493447 ['ENSG00000137200|ENST00000373451|CMTR1'] 34369 18831 GPFSAVIT True PC9_epitope_Rep4 790.42250471362 790.4219549679301 80.521 1 -0.27654580394737355 0.07171293014124448 0.7375228248560082 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 43477 6264 IGISHGSVVA True PC9_epitope_Rep4 938.5185303567799 938.51742993586 31.148 2 -0.27658329515361796 0.07171293014124448 0.7375636638150476 ['ENSG00000155897|ENST00000286355|ADCY8'] 93309 7736 RPRVTEPISA True PC9_epitope_Rep5 1124.6302060640799 1124.62855490379 34.698 3 -0.276724860452777 0.07178303310126698 0.7377177881721739 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 23858 19915 EYIQFVPLL True NCI_RA007_Epitope_Rep3 1120.6168474157198 1120.61574993586 86.799 2 -0.27675853403688394 0.07178303310126698 0.7377544301031799 ['ENSG00000179409|ENST00000319004|GEMIN4'] 44045 10353 IIISPRNGVP True H1975_Epitope_Rep3 1064.63422881536 1064.63312993586 44.877 2 -0.2768506937497789 0.07179990547860544 0.737854676466909 ['ENST00000392557.8_1_14:105713688-105714024:-|nuORF'] 117720 12479 TVVAQLKQL True PC9_epitope_Rep6 998.6124307416198 998.61132993586 59.422 2 -0.27691825377114065 0.0718673888545567 0.7379281299945356 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 48521 10925 KAKGMEPIEV True PC9_epitope_Rep3 1100.58998104488 1100.5888899358602 47.004 2 -0.27693142199311643 0.0718673888545567 0.7379424435243715 ['ENSG00000075643|ENST00000261326|MOCOS'] 78382 4708 NYKSHHLQL True NCI_RA007_Epitope_Rep4 1138.5883412521 1138.58668490379 24.538 3 -0.27696000841173063 0.0718673888545567 0.7379735124330394 ['nc|ENSG00000095485|Q69YN2-2|CWF19L1', 'nc|ENSG00000095485|Q69YN2-3|CWF19L1', 'ENSG00000095485|ENST00000354105|CWF19L1'] 81641 24560 PLLLLCVAL True PC9_epitope_Rep1 953.5983609006099 953.59726993586 99.33 2 -0.2769641508535705 0.0718673888545567 0.7379780141777217 ['ENSG00000187944|ENST00000342506|C2orf66', 'nc|nan|Q6UXQ4|C2orf66'] 133517 23869 VWLRWFLWRLL True PC9_epitope_Rep4 1586.92380931498 1586.9227099358602 100.25 2 -0.27697099803822034 0.07188164519001836 0.7379854550259654 ['ENST00000264649.10_1_17:40610912-40612943:+|nuORF'] 11950 4078 DHNDGLGNAF True NCI_RA007_Epitope_Rep3 1058.44173658806 1058.4406299358602 22.551 2 -0.27700931729660616 0.07188164519001836 0.7380270911078619 ['ENSG00000271447|ENST00000605424|MMP28'] 13064 8492 DLPGGSHRRVP True H1975_Epitope_Rep3 1189.63160304641 1189.6305099358601 37.65 2 -0.27705329295819875 0.07188164519001836 0.7380748616518041 ['ENST00000303277.6_1_4:1718988-1719900:-|nuORF'] 85154 5523 QEMSRC[Carbamidomethyl]KT True H1975_Epitope_Rep2 1038.4586498849299 1038.45754993586 26.252 2 -0.27708600220468366 0.0719127669241254 0.7381103855523846 ['nc|ENSG00000139973|Q17RD7-2|SYT16', 'ENSG00000139973|ENST00000683842|SYT16', 'nc|ENSG00000139973|Q17RD7-3|SYT16'] 127851 20765 VPFPTPLEA True PC9_epitope_Rep2 969.5171333744498 969.51602993586 85.315 2 -0.27709139373347846 0.0719127669241254 0.7381162403721495 ['ENSG00000196976|ENST00000357360|LAGE3'] 65610 5254 LRWTCPWVE True PC9_epitope_Rep6 1188.5749996870798 1188.57390993586 27.994 2 -0.2771155052673315 0.0719127669241254 0.7381424215332254 ['ENST00000256649.8_1_1:117663501-117663540:-|nuORF'] 31769 5903 GEIAIDDIR True NCI_RA007_Epitope_Rep4 1000.5189242796 1000.51782993586 29.329 2 -0.2771294278376481 0.0719127669241254 0.7381575374715255 ['nc|ENSG00000118257|O60462-4|NRP2', 'nc|ENSG00000118257|O60462-5|NRP2', 'nc|ENSG00000118257|O60462-2|NRP2', 'ENSG00000118257|ENST00000357785|NRP2', 'nc|ENSG00000118257|O60462|NRP2', 'ENST00000472299.5_1_2:206628534-206631586:+|nuORF', 'ENST00000485684.5_1_2:206628477-206631981:+|nuORF', 'ENST00000467850.1_1_2:206629136-206659779:+|nuORF'] 8338 16972 ATKKTIERRY True NCI_RA007_Epitope_Rep5 1264.72516907808 1264.7240699358601 72.041 2 -0.2772280627496759 0.07192963326427507 0.7382645915907952 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 85076 7384 QEKEAIERLK True NCI_RA007_Epitope_Rep5 1242.6932002434598 1242.6915449037901 35.081 3 -0.27735159015096883 0.07196205637027749 0.738398576054295 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B', 'nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A'] 54285 13556 KWWGWERRNRR True NCI_RA007_Epitope_Rep2 1628.8548948913597 1628.85378993586 57.369 2 -0.27736455354168094 0.07196205637027749 0.7384126312569643 ['ENST00000395648.7_2_11:44955194-44955650:-|nuORF'] 67777 8379 LSYRWLHNEFP True NCI_RA007_Epitope_Rep1 1460.7200836976394 1460.71843490379 36.594 3 -0.277371065613162 0.07196205637027749 0.7384196913928782 ['CNTN2|p.L170H|1|0.66|ENSG00000184144|chr1:205059105-205059105|T/A|missense_variant'] 19732 24181 ELRRRFERLRL True PC9_epitope_Rep4 1542.9219118220196 1542.92080993586 101.49 2 -0.27744905358540867 0.07197761261834239 0.7385042221778406 ['PABPC5|p.S327Qfs*7|1|0.12|ENSG00000174740|chrX:91436553-91436553|G/-|frameshift_variant', 'nc|ENSG00000174740|Q96DU9-2|PABPC5', 'ENSG00000174740|ENST00000312600|PABPC5'] 82139 9293 PNIICDCCKK True H1975_Epitope_Rep1 1135.51880733391 1135.51770993586 40.654 2 -0.2774582734240344 0.07197761261834239 0.7385142129863572 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF', 'ENST00000508455.1_1_1:1558985-1559326:+|nuORF'] 46220 17976 ISNIDTFDV True PC9_epitope_Rep1 1022.49204082542 1022.4909499358599 73.937 2 -0.27749035844498054 0.07200479668592609 0.7385489768167903 ['SOX9|p.E287D|1|0.05|ENSG00000125398|chr17:72123718-72123718|G/T|missense_variant'] 22493 5516 ETFSQQAPP True H1975_Epitope_Rep2 1003.4610750503099 1003.45996993586 26.229 2 -0.2775308881481834 0.07200479668592609 0.7385928811450038 ['ENSG00000081853|ENST00000394576|PCDHGA2'] 117471 12390 TVQWENSF True PC9_epitope_Rep2 1009.4505103666099 1009.44940993586 52.966 2 -0.2775610337191717 0.07200479668592609 0.7386255300462009 ['ENSG00000174231|ENST00000304992|PRPF8'] 34079 18435 GLWNFVEGL True PC9_epitope_Rep5 1033.5232813840498 1033.52218993586 75.932 2 -0.27756426178607724 0.07200479668592609 0.7386290258387466 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|206|1|anti-sense'] 99906 9097 SIMGYYYVP True PC9_epitope_Rep1 1091.4997690581502 1091.49866993586 39.843 2 -0.2775674429278977 0.07200479668592609 0.7386324707505368 ['nc|ENSG00000163406|Q16348-2|SLC15A2', 'ENSG00000163406|ENST00000489711|SLC15A2'] 72270 9906 MHWKMRSHFNR True PC9_epitope_Rep1 1528.7292259960398 1528.7275649037902 42.961 3 -0.2776008861611718 0.07200479668592609 0.7386686831541419 ['nc|ENSG00000292332|P26951-2|IL3RA', 'ENSG00000185291|ENST00000331035|IL3RA'] 83980 20939 PVSITQDIL True PC9_epitope_Rep2 984.54916177872 984.54806993586 85.989 2 -0.2776048103309604 0.07200479668592609 0.7386729317946618 ['ENSG00000171811|ENST00000368586|CFAP46', 'CFAP46|p.R2443K|1|0.09|ENSG00000171811|chr10:132814212-132814212|C/T|missense_variant'] 129068 20978 VQPFLRVPL True PC9_epitope_Rep2 1067.64915060351 1067.6480499358602 86.143 2 -0.2776509036516077 0.07202165737022838 0.7387228291435249 ['nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENSG00000023287|ENST00000025008|RB1CC1', 'RB1CC1|p.D931Gfs*17|1|0.1|ENSG00000023287|chr8:52657039-52657040|-/T|frameshift_variant'] 61867 9272 LLCNCQVP True NCI_RA007_Epitope_Rep5 888.4197449156401 888.41864993586 42.311 2 -0.27768348999691617 0.07203851744186046 0.738758096794943 ['ENSG00000144182|ENST00000651691|LIPT1'] 108612 18989 SYPKCFSLGV True PC9_epitope_Rep4 1099.53721719603 1099.5361099358602 81.133 2 -0.27774663740886196 0.07210857163620508 0.7388264213233776 ['ENSG00000188649|ENST00000646931|CC2D2B', 'CC2D2B|p.A87Vfs*6|1|0.09|ENSG00000188649|chr10:96012670-96012671|-/TTTATTTTTGC|frameshift_variant', 'CC2D2B|p.A87Nfs*19|1|0.09|ENSG00000188649|chr10:96012669-96012670|-/AACCAAT|frameshift_variant', 'nc|ENSG00000188649|Q6DHV5-4|CC2D2B'] 79789 20298 PEEGIVIID True PC9_epitope_Rep4 983.5175272972699 983.5169749679301 86.219 1 -0.2777799313247822 0.07210857163620508 0.7388624348313028 ['nc|ENSG00000163728|Q96N46-2|TTC14'] 89636 22443 QYSPLLAAF True PC9_epitope_Rep3 1008.5280324113198 1008.5274749679301 91.602 1 -0.2778313883292501 0.07212542920989044 0.738918081512961 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 43750 6023 IHIEQLDKISE True NCI_RA007_Epitope_Rep3 1323.70343057399 1323.70177490379 30.67 3 -0.2778985672833909 0.07213966500744831 0.7389907055111267 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF', 'HUWE1|p.V474Cfs*21|1|0.25|ENSG00000086758|chrX:53627479-53627480|-/A|frameshift_variant'] 48219 15397 IYPWVHVVI True NCI_RA007_Epitope_Rep3 1124.6382515666398 1124.6371499358602 68.119 2 -0.2779041995246138 0.07213966500744831 0.7389967929907865 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 41130 9312 HTVGPIRRRYS True PC9_epitope_Rep1 1340.74255047772 1340.7409049037901 40.675 3 -0.2779129537893598 0.07213966500744831 0.7390062544486129 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 73554 7628 MVRPVAVAA True PC9_epitope_Rep6 912.5215075622399 912.52040993586 38.643 2 -0.27800189172045703 0.07215652079132377 0.7391023501616641 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 3047 16188 AFRTLSELVL True PC9_epitope_Rep5 1147.66010921003 1147.6584749037902 67.256 3 -0.278048321066548 0.07219023052189867 0.7391524967712965 ['ENSG00000071246|ENST00000167106|VASH1'] 22068 7999 ESLTDTQL True NCI_RA007_Epitope_Rep4 905.43419159613 905.43364496793 37.536 1 -0.27810859261203347 0.07219023052189867 0.7392175740194546 ['ENSG00000113615|ENST00000398844|SEC24A'] 88382 19100 QSLEYLEQV True PC9_epitope_Rep4 1107.54480467427 1107.54427496793 81.56 1 -0.2781402758584588 0.07220708446866485 0.7392517745453924 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 70670 16966 LWHIWRERN True PC9_epitope_Rep6 1308.68397297244 1308.68233490379 77.805 3 -0.27824669391608026 0.0722784327260177 0.7393666025848419 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 115677 17399 TSAESFVNV True PC9_epitope_Rep1 952.45017601344 952.44906993586 71.726 2 -0.27831726734498513 0.0722952844583303 0.7394427150475236 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 101168 10729 SLGSVQAP True PC9_epitope_Rep2 757.3970182417698 757.39592993586 46.588 2 -0.27841004797722657 0.07230819529206627 0.7395427314325237 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF', 'ENST00000453838.2_1_1:182929095-182929497:-|nuORF'] 118728 14975 TYVFFVNTL True NCI_RA007_Epitope_Rep5 1102.5698972233 1102.5688099358601 64.268 2 -0.2784165624832699 0.07230819529206627 0.7395497520207215 ['ENSG00000169402|ENST00000404077|RSPH10B2'] 96154 9811 RYPDRITLI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65405490379 44.383 3 -0.27845844657029956 0.07230819529206627 0.7395948837288641 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 13647 4688 DPNSEKCNCY True H1975_Epitope_Rep2 1171.42740904687 1171.42576490379 23.127 3 -0.2784765259909859 0.07230819529206627 0.739614361704389 ['nc|ENSG00000196277|Q14831-5|GRM7'] 67013 16876 LSPNHKVLHY True H1975_Epitope_Rep2 1206.65094150866 1206.6498499358602 70.159 2 -0.27850795755994023 0.07234320794812649 0.739648219977643 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ELMO1|p.R578L|1|0.17|ENSG00000155849|chr7:36878099-36878099|C/A|missense_variant'] 142302 11913 YYDKHFTEF True PC9_epitope_Rep4 1248.54513902744 1248.54349490379 53.604 3 -0.2786670065685009 0.07240928407976463 0.7398194569005021 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 99820 12075 SIKYKEENL True PC9_epitope_Rep1 1122.59208921986 1122.59044490379 51.306 3 -0.2787130021967701 0.07240928407976463 0.7398689487713368 ['ENSG00000196187|ENST00000366835|TMEM63A', 'ENST00000537914.5_1_1:226053833-226054426:-|nuORF'] 90919 17272 REYPNSGPQL True PC9_epitope_Rep1 1159.5621860739097 1159.56055490379 71.255 3 -0.27874008907600706 0.07240928407976463 0.7398980886561496 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'nc|ENSG00000146414|Q149N8-5|SHPRH'] 28114 13797 FQYRRIQYMTK True NCI_RA007_Epitope_Rep1 1532.7922030920797 1532.79110993586 57.684 2 -0.27877805436075787 0.07240928407976463 0.7399389240669407 ['ENST00000548860.5_1_12:49210766-49210967:+|nuORF'] 140647 7620 YRSRKKHLI True NCI_RA007_Epitope_Rep4 1199.7251095084298 1199.7234749037902 35.964 3 -0.27878691043161463 0.07240928407976463 0.7399484484060759 ['ENSG00000244005|ENST00000374092|NFS1', 'nc|ENSG00000244005|Q9Y697-2|NFS1'] 77958 18123 NVLQMLEV True PC9_epitope_Rep5 944.50010341132 944.49900993586 74.72 2 -0.2788292150764997 0.07246245210032146 0.7399939388504863 ['BUB1|p.A13V|1|0.29|ENSG00000169679|chr2:110674354-110674354|G/A|missense_variant'] 27974 4551 FQHQAFRREFW True NCI_RA007_Epitope_Rep2 1550.7531151614198 1550.75146490379 22.331 3 -0.27887366266334285 0.07249745750399535 0.7400417221296733 ['ENST00000523612.1_1_8:142469282-142469963:+|nuORF'] 135876 18622 WPHRYLTYRYF True H1975_Epitope_Rep1 1600.7939173442398 1600.79282993586 77.664 2 -0.27906042195633235 0.072531144444848 0.740242369338738 ['ENSG00000174792|ENST00000311623|ODAPH'] 79463 11041 PAVSENSDLEQ True H1975_Epitope_Rep1 1187.53061116211 1187.52950993586 47.432 2 -0.27912929478628323 0.072531144444848 0.7403163118537402 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 138242 10141 YGSSVSYLGVP True NCI_RA007_Epitope_Rep1 1127.54989005471 1127.5487899358602 43.457 2 -0.27918219778567865 0.07254666957216532 0.7403730901343009 ['nc|ENSG00000293543|Q6B8I1|DUSP13A', 'nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 103505 4761 SPQRIASAV True PC9_epitope_Rep6 927.5137793295098 927.51268993586 25.758 2 -0.2792007207503657 0.07254666957216532 0.7403929660879044 ['nc|ENSG00000112139|Q8NFP4-2|MDGA1', 'ENSG00000112139|ENST00000434837|MDGA1'] 118480 15555 TYPPSGPTVFP True H1975_Epitope_Rep2 1161.57062549929 1161.5695299358601 64.988 2 -0.2794835444500969 0.07269062448927709 0.7406962009370438 ['nc|ENSG00000104763|Q13510-3|ASAH1'] 9117 20677 AVITGFFTV True PC9_epitope_Rep6 953.5222187548899 953.52112993586 92.294 2 -0.279625833328147 0.07275929692039512 0.7408485845833286 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 59052 4236 LEVSVDSDQKK True NCI_RA007_Epitope_Rep2 1246.6404959642598 1246.63885490379 21.116 3 -0.2796752758903795 0.07275929692039512 0.74090150784022 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 119656 8674 VAVDQQPVT True NCI_RA007_Epitope_Rep3 955.4974605590298 955.49636993586 41.2 2 -0.2797258792681696 0.07275929692039512 0.7409556592610393 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 132648 3964 VVFYARQRIQP True H1975_Epitope_Rep3 1375.77245362367 1375.7707949037901 20.376 3 -0.2797316089922522 0.07279296945927298 0.7409617898088889 ['ENSG00000141560|ENST00000269373|FN3KRP'] 66968 8188 LSPDTVQRL True H1975_Epitope_Rep1 1027.56620882519 1027.5651099358602 36.435 2 -0.27975411365338826 0.07279296945927298 0.7409858669899204 ['ENSG00000184571|ENST00000616349|PIWIL3', 'nc|ENSG00000184571|Q7Z3Z3|PIWIL3'] 67564 13062 LSTSELGHL True PC9_epitope_Rep2 955.4974605590301 955.49636993586 55.521 2 -0.27979692957445657 0.07280980481162051 0.7410316667863678 ['ENSG00000125872|ENST00000378858|LRRN4'] 104347 18029 SQISDTSVVL True PC9_epitope_Rep2 1047.5448046742702 1047.54427496793 74.653 1 -0.2798735107722567 0.07282399506154907 0.7411135592326324 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 62154 14788 LLEKELESV True PC9_epitope_Rep4 1058.58594121026 1058.5848499358601 64.818 2 -0.27992220142379065 0.07282399506154907 0.7411656096737964 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF'] 39512 7328 HLEQLDERWRD True H1975_Epitope_Rep3 1495.71678922235 1495.7151449037901 33.162 3 -0.27994142988075943 0.07282399506154907 0.7411861612913159 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 65981 19335 LSDWYTMLY True H1975_Epitope_Rep1 1190.53179746242 1190.5307099358602 80.548 2 -0.27999027953332006 0.07285898436790791 0.7412383631278405 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 142363 5171 YYEHVKARF True PC9_epitope_Rep6 1211.60874234351 1211.60710490379 27.63 3 -0.2802408800829957 0.07294843863471315 0.7415059522270859 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 69937 13833 LVKMYSLGL True PC9_epitope_Rep1 1022.5834391124599 1022.58234993586 58.051 2 -0.28026696907224874 0.07296394466431866 0.7415337899190168 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 112466 9134 TLDICPNVLP True H1975_Epitope_Rep2 1083.56343194387 1083.5623299358601 40.087 2 -0.2802679420504614 0.07296394466431866 0.7415348280421802 ['ENST00000538886.5_1_17:73233291-73233537:-|nuORF'] 95593 9185 RWWFRRLFLIF True NCI_RA007_Epitope_Rep5 1638.9299573245796 1638.9288699358601 41.981 2 -0.280288756737004 0.07298077446762159 0.7415570351164635 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 4903 23941 ALFGALFLA True PC9_epitope_Rep3 921.5323895157699 921.53128993586 97.376 2 -0.2804763023996081 0.07303258600344921 0.7417570199515346 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 134320 16174 VYNSEYYHF True PC9_epitope_Rep5 1220.5138388991602 1220.5132749679299 67.204 1 -0.28050193969459936 0.07303258600344921 0.7417843428300556 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 32090 5976 GESSFGSHLP True H1975_Epitope_Rep2 1016.45632402304 1016.45522993586 27.965 2 -0.2805376748474268 0.0730494136441201 0.7418224215495335 ['ENSG00000123307|ENST00000242994|NEUROD4'] 55387 11582 LAEQNHLYEDL True NCI_RA007_Epitope_Rep4 1343.63574493699 1343.6346499358601 51.497 2 -0.2806385875871231 0.07306358801212583 0.7419299151796853 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL'] 103503 4830 SPQRIASAV True PC9_epitope_Rep4 927.5137793295098 927.51268993586 25.162 2 -0.2806499698753693 0.07306358801212583 0.7419420363182351 ['nc|ENSG00000112139|Q8NFP4-2|MDGA1', 'ENSG00000112139|ENST00000434837|MDGA1'] 54965 9170 KYQEVTNNL True PC9_epitope_Rep1 1107.5560380643099 1107.55547496793 40.122 1 -0.2806679822665449 0.07306358801212583 0.7419612165175986 ['ENSG00000135387|ENST00000341394|CAPRIN1', 'nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.V435Dfs*6|1|0.27|ENSG00000135387|chr11:34090188-34090189|-/A|frameshift_variant'] 130246 4910 VSFRRDHLL True NCI_RA007_Epitope_Rep3 1141.63562579769 1141.63399490379 26.303 3 -0.2807669779224454 0.07309591229216583 0.742066599495983 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENSG00000118217|ENST00000367942|ATF6'] 69904 13627 LVILNCPL True PC9_epitope_Rep6 883.52011057991 883.51900993586 64.185 2 -0.2807953103784043 0.07309591229216583 0.7420967503957212 ['ENST00000372004.7_1_20:46282573-46282858:+|nuORF'] 2482 7454 AEQLRQMM True H1975_Epitope_Rep2 1005.47357139365 1005.47246993586 33.618 2 -0.28081034475662087 0.07309591229216583 0.7421127479856284 ['ENST00000270502.6_1_19:11040414-11040630:+|nuORF'] 37356 22709 GVSIALLGV True PC9_epitope_Rep2 827.5116540711899 827.51110496793 92.845 1 -0.2809156439386033 0.07311140959088104 0.7422247598804602 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-3|CDCP1'] 118984 21853 VAEGVLMTSL True PC9_epitope_Rep5 1018.53688284286 1018.53578993586 89.093 2 -0.2809250271112326 0.07311140959088104 0.7422347383816935 ['ENST00000416880.5_1_3:42610473-42623377:-|nuORF'] 64258 13463 LPHGFTNMA True PC9_epitope_Rep5 986.4643866089401 986.46328993586 56.803 2 -0.2810027964272844 0.07314505590242486 0.7423174240733714 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 57291 6970 LEAAFEFEVTR True NCI_RA007_Epitope_Rep1 1310.65066672514 1310.64901490379 31.114 3 -0.28100408050165365 0.07314505590242486 0.7423187890573988 ['ENST00000567073.2_1_16:33123771-33127908:-|nuORF'] 125405 12171 VISPHGIASV True PC9_epitope_Rep3 978.5498304850599 978.54872993586 51.853 2 -0.28106996816976665 0.07318887921022067 0.7423888167432431 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000489065.1_1_2:224866320-224903835:-|nuORF'] 20762 15258 EQFSFVEY True H1975_Epitope_Rep2 1047.45492704071 1047.45382993586 63.847 2 -0.281089016113218 0.07318887921022067 0.7424090573323952 ['ENSG00000189319|ENST00000337318|FAM53B', 'nc|ENSG00000189319|Q14153-2|FAM53B', 'ENST00000494792.1_1_10:126307332-126395327:-|nuORF'] 78784 19043 PAAPHFLPV True PC9_epitope_Rep5 947.52288746123 947.5217899358599 78.277 2 -0.28109763993831555 0.07318887921022067 0.7424182204980959 ['ENSG00000185504|ENST00000327787|FAAP100', 'nc|ENSG00000185504|Q0VG06-3|FAAP100'] 131197 19025 VTEMRRTL True PC9_epitope_Rep5 1004.5436995587999 1004.54260993586 78.206 2 -0.28118462524915167 0.07318887921022067 0.7425106243295944 ['nc|ENSG00000105325|Q9UM11-3|FZR1', 'ENSG00000105325|ENST00000441788|FZR1', 'nc|ENSG00000105325|Q9UM11|FZR1', 'ENST00000588327.1_1_19:3506419-3526183:+|nuORF'] 20751 16220 EQFAGVVLY True H1975_Epitope_Rep3 1024.5229470308798 1024.5223749679299 67.847 1 -0.28118666933484004 0.07318887921022067 0.7425127952743962 ['ENSG00000184500|ENST00000394236|PROS1'] 27237 10789 FLPETEPP True PC9_epitope_Rep1 928.4541987647199 928.45310993586 46.388 2 -0.2812701042035297 0.07318887921022067 0.7426013898178816 ['ENSG00000110876|ENST00000550948|SELPLG', 'nc|ENSG00000110876|Q14242-2|SELPLG'] 109917 9506 TEFQRRVSK True H1975_Epitope_Rep1 1149.6254550368099 1149.6243499358602 41.485 2 -0.2812763668975862 0.07318887921022067 0.7426080383534901 ['ENST00000506547.5_1_4:81117206-81117508:+|nuORF'] 27837 19045 FQDGDTIVNV True PC9_epitope_Rep1 1106.52440358286 1106.52387496793 78.048 1 -0.2812853024075314 0.07318887921022067 0.7426175240265368 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 53066 4141 KPPPPPPPP True H1975_Epitope_Rep2 922.5276384884999 922.52654993586 21.02 2 -0.2813472234376385 0.0732211878708694 0.7426832462928089 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 62387 16382 LLGPTVML True H1975_Epitope_Rep2 842.4935614789 842.4930149679301 68.234 1 -0.28138932546332607 0.0732211878708694 0.742727921676926 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 68838 21139 LTLWIFWTIP True PC9_epitope_Rep1 1288.7219811905998 1288.7208899358602 86.141 2 -0.2814228865696542 0.0732211878708694 0.7427635276180573 ['ENST00000608279.1_1_2:133104517-133104757:-|nuORF'] 31517 19252 GEDFLSWNDL True H1975_Epitope_Rep1 1194.51931820242 1194.5187749679299 80.216 1 -0.28143466801795375 0.07323667640494293 0.742776025532935 ['ENSG00000183856|ENST00000361170|IQGAP3'] 31264 9278 GDFC[Carbamidomethyl]IQVGR True H1975_Epitope_Rep3 1050.49166426537 1050.49056993586 40.682 2 -0.28144386210770517 0.07323667640494293 0.7427857782528847 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF'] 30135 13634 FYNPAVSRI True PC9_epitope_Rep4 1065.56072952193 1065.5596299358601 60.335 2 -0.2814795498287692 0.07327163854109962 0.7428236302760919 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 123271 16045 VGLLERLPQR True PC9_epitope_Rep1 1179.7087907379498 1179.70714490379 66.532 3 -0.2815348282500167 0.07330260913742424 0.7428822483289439 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'ENST00000589085.5_1_19:5785216-5787684:-|nuORF'] 45258 4153 IPVEQKEGA True PC9_epitope_Rep3 969.5131106231698 969.51200993586 21.093 2 -0.2815501682317819 0.07330260913742424 0.7428985123293603 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 133910 11986 VYIDRVRSL True PC9_epitope_Rep5 1119.64004247179 1119.6389499358602 51.1 2 -0.28160968716338614 0.07330260913742424 0.7429616051943606 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 139361 7609 YLLSESFRR True NCI_RA007_Epitope_Rep3 1169.61930702721 1169.61766490379 37.061 3 -0.2816316324537066 0.07330260913742424 0.742984863730403 ['ENSG00000135577|ENST00000258042|NMBR'] 135825 17067 WNPRRWWRWCW True PC9_epitope_Rep5 1730.8153385785 1730.81424993586 70.668 2 -0.2817357852348155 0.07335571078653724 0.7430952162559789 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 65388 10087 LREERAYIL True PC9_epitope_Rep4 1161.6506071554898 1161.64897490379 46.471 3 -0.281788305982138 0.073371192191157 0.7431508427665039 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 16895 20344 EFLGAPVG True PC9_epitope_Rep3 788.4068546494799 788.40630496793 83.501 1 -0.2817934355296482 0.073371192191157 0.7431562749086099 ['IKZF4|p.P387Hfs*56|1|0.17|ENSG00000123411|chr12:56034732-56034732|C/-|frameshift_variant', 'nc|ENSG00000123411|Q9H2S9-2|IKZF4', 'ENST00000551124.5_1_12:56418779-56429112:+|nuORF', 'ENSG00000123411|ENST00000547167|IKZF4'] 5167 14843 ALLSTALGKP True PC9_epitope_Rep2 969.5858816406098 969.58478993586 62.358 2 -0.28181200293958103 0.07338800391886498 0.7431759365259373 ['ENST00000489330.6_1_X:11166772-11683098:-|nuORF'] 121581 10663 VFEQEAKKV True PC9_epitope_Rep6 1076.5866099165999 1076.58550993586 51.833 2 -0.2818324312196286 0.07340348330914369 0.7431975666996362 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 38561 5688 HETPPPLAA True H1975_Epitope_Rep2 931.4763311916299 931.4752299358599 26.877 2 -0.28184119309068106 0.07340348330914369 0.7432068434392551 ['ENST00000489567.5_1_6:7310225-7313369:-|nuORF'] 36125 18990 GVALLNFYNMP True PC9_epitope_Rep6 1237.61653014589 1237.6154299358602 85.688 2 -0.28184774079285624 0.07341762966456833 0.7432137756517089 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-5|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'CRB1|p.N1184Kfs*10|1|0.64|ENSG00000134376|chr1:197435411-197435412|-/A|frameshift_variant', 'CRB1|p.G1260Vfs*3|1|0.28|ENSG00000134376|chr1:197438575-197438576|-/T|frameshift_variant', 'nc|ENSG00000134376|P82279-2|CRB1', 'CRB1|p.G899Efs*89|1|0.27|ENSG00000134376|chr1:197429467-197429467|G/-|frameshift_variant'] 45989 5121 ISFENASFLDP True H1975_Epitope_Rep3 1238.58191845898 1238.58082993586 24.808 2 -0.28186174205494197 0.07341762966456833 0.7432285984178496 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 102202 7096 SLSAGPAVAA True NCI_RA007_Epitope_Rep4 842.4497820906199 842.44868993586 33.916 2 -0.28187205304798135 0.07341762966456833 0.7432395137733008 ['ENST00000315872.10_1_2:11484261-11484312:-|nuORF'] 137299 17266 YDDKIYYF True NCI_RA007_Epitope_Rep4 1125.5018772331298 1125.5007899358602 74.765 2 -0.28202406230632704 0.07350700239460126 0.7434003719929655 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 115681 16949 TSAESFVNV True PC9_epitope_Rep2 952.45017601344 952.44962496793 70.437 1 -0.2820622164262387 0.07351847484989751 0.7434407293877127 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 70601 26626 LWHIWRERN True H1975_Epitope_Rep2 1308.68397297244 1308.68233490379 109.68 3 -0.2820701646518391 0.07351847484989751 0.7434491357021429 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 34129 12410 GMYLGEIVRQ True PC9_epitope_Rep4 1164.59612905448 1164.59502993586 55.54 2 -0.282074590609596 0.07351847484989751 0.7434538166123733 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000470920.1_1_10:71018680-71021051:+|nuORF'] 132565 13810 VVEIRNFL True PC9_epitope_Rep6 988.57056592964 988.56946993586 64.923 2 -0.28209075910849224 0.07351847484989751 0.7434709156681728 ['ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 59166 19052 LFAGKRAFSQK True PC9_epitope_Rep5 1251.7087907379498 1251.7076899358601 78.311 2 -0.28214054528526034 0.07351847484989751 0.7435235592305061 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A'] 110179 7741 TEPVAATETL True PC9_epitope_Rep2 1030.51825557326 1030.51714993586 35.151 2 -0.282155225508821 0.07353394641853041 0.7435390796989482 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2'] 54233 8771 KWEPRQRRRRE True NCI_RA007_Epitope_Rep2 1595.8869232956297 1595.88526490379 38.764 3 -0.28218099006104896 0.07353394641853041 0.7435663163978722 ['LTR12C_dup1156|chr6:63273974-63275493:-|1.1245883398790455|0.0455730948213315|4.63|468.0|67|2|anti-sense'] 42589 9665 IEGASIVDG True H1975_Epitope_Rep2 859.4287122928699 859.42816496793 42.158 1 -0.28226191635299297 0.07356888921134731 0.7436518458173269 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.L1765Ffs*29|1|0.47|ENSG00000136011|chr12:103733013-103733014|-/T|frameshift_variant', 'STAB2|p.D1112G|1|0.54|ENSG00000136011|chr12:103692849-103692849|A/G|missense_variant', 'STAB2|p.E1519Rfs*42|1|0.29|ENSG00000136011|chr12:103715831-103715831|G/-|frameshift_variant'] 124623 12346 VGWICHFSYGK True H1975_Epitope_Rep1 1295.6121134717898 1295.61100993586 52.519 2 -0.2823974158197619 0.07360249573765734 0.7437949820548395 ['ENST00000522958.5_1_5:179046175-179048291:-|nuORF'] 56434 8125 LDEIDEAR True PC9_epitope_Rep2 959.45598966987 959.45488993586 36.611 2 -0.2824041077866851 0.07360249573765734 0.743802048906215 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5'] 11538 18728 DFQDSVFNDL True H1975_Epitope_Rep2 1198.51423282198 1198.5131299358602 77.742 2 -0.2824244012533107 0.07365423679628555 0.7438234779094647 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 32351 12414 GFGGAALL True H1975_Epitope_Rep1 704.38572528208 704.3851749679301 52.784 1 -0.2824310080979359 0.07365423679628555 0.7438304540220739 ['ENST00000366663.9_1_1:230972959-230973187:-|nuORF'] 70070 5200 LVNGYRCICPP True NCI_RA007_Epitope_Rep4 1233.5998345359299 1233.59818490379 26.534 3 -0.28250166423321826 0.07368917423871447 0.7439050462843199 ['nc|ENSG00000101384|P78504-2|JAG1', 'JAG1|p.A1131Pfs*19|1|0.19|ENSG00000101384|chr20:10639764-10639764|C/-|frameshift_variant', 'JAG1|p.N1187Tfs*25|1|0.07|ENSG00000101384|chr20:10639597-10639597|G/-|frameshift_variant', 'ENSG00000101384|ENST00000254958|JAG1'] 13482 10163 DNIQTVKRLRT True PC9_epitope_Rep1 1342.7680965192199 1342.76698993586 43.968 2 -0.2826221242337329 0.07377851935144547 0.7440321624689508 137710 17379 YELIYVLYKA True PC9_epitope_Rep1 1273.69582601241 1273.69472993586 71.655 2 -0.28272646239328175 0.07378862614246337 0.7441422109160784 ['C9|p.D363Y|1|0.35|ENSG00000113600|chr5:39311161-39311161|C/A|missense_variant'] 10102 18386 AYTTEHWLV True PC9_epitope_Rep5 1118.53965972418 1118.53856993586 75.741 2 -0.2829332017280778 0.07378862614246337 0.7443601154022704 ['ENST00000526364.1_1_11:125488416-125491330:+|nuORF', 'nc|ENSG00000134910|P46977-2|STT3A', 'ENSG00000134910|ENST00000392708|STT3A'] 101454 16609 SLKYLIGEV True PC9_epitope_Rep3 1020.5855472874399 1020.58444993586 69.023 2 -0.28293818422195477 0.07378862614246337 0.744365364548312 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'ENST00000492261.5_1_12:124409716-124414381:+|nuORF'] 1599 6281 AEFAEVSK True PC9_epitope_Rep3 879.43379767331 879.43270993586 29.193 2 -0.2829591531240671 0.07378862614246337 0.7443874544126959 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 58509 13290 LEQERQRNFEK True H1975_Epitope_Rep3 1475.7480893506297 1475.74698993586 56.377 2 -0.2829764507679158 0.07378862614246337 0.744405675243739 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 16627 3819 EEQDPSPEA True H1975_Epitope_Rep3 1000.3985343633999 1000.39742993586 19.787 2 -0.2829968542727381 0.07378862614246337 0.7444271659387154 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550699.5_1_12:58109828-58111744:+|nuORF'] 41473 6532 HYLDTTTLIE True H1975_Epitope_Rep3 1204.59756852312 1204.5964699358601 30.092 2 -0.28324095611969374 0.07385982410009974 0.7446841280096189 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 12160 11302 DIEKESEGQAP True PC9_epitope_Rep2 1201.54626122625 1201.54516993586 48.796 2 -0.28331526396754286 0.07390618483799025 0.7447622974050289 ['ENSG00000125482|ENST00000334270|TTF1'] 131790 6559 VTQDGIQE True PC9_epitope_Rep5 888.41887588516 888.41776993586 30.2 2 -0.2833229997304988 0.07390618483799025 0.744770433754108 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3'] 73524 14015 MVLGEVNI True NCI_RA007_Epitope_Rep4 873.4629896266099 873.4624449679301 61.188 1 -0.28334170628845223 0.07390618483799025 0.7447901079042389 ['ENSG00000134259|ENST00000369512|NGF'] 107477 14275 SVMPETEEV True PC9_epitope_Rep1 1019.4481274081099 1019.4475749679301 59.733 1 -0.28334691725086564 0.07390618483799025 0.7447955881250103 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 59932 15136 LGGQLNVSV True PC9_epitope_Rep4 885.4919812557699 885.49088993586 66.148 2 -0.2833532587151769 0.07390618483799025 0.7448022570994967 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1'] 62906 16725 LLNSYTTP True PC9_epitope_Rep1 907.46509780159 907.46400993586 69.161 2 -0.283357731067441 0.07390618483799025 0.7448069603225754 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF'] 30522 11821 GAGLLISSLL True NCI_RA007_Epitope_Rep5 942.5749826037401 942.57388993586 52.127 2 -0.2834561809773394 0.07392163617572933 0.744910469928263 ['ENSG00000112337|ENST00000377850|SLC17A2', 'nc|ENSG00000112337|O00624|SLC17A2', 'nc|ENSG00000112337|O00624-2|SLC17A2'] 5723 2689 APAPKPEAA True PC9_epitope_Rep1 850.4548674710599 850.45376993586 14.776 2 -0.2834991607472506 0.07392163617572933 0.7449556451571209 ['ENSG00000205903|ENST00000382252|ZNF316'] 78710 12151 PAAAAAMEAMP True H1975_Epitope_Rep2 1029.4623380036098 1029.46124993586 51.823 2 -0.2836244253530262 0.07394583227584206 0.7450872621986188 ['ENST00000325192.7_1_14:45366516-45366663:+|nuORF'] 67750 9759 LSYINTSADP True H1975_Epitope_Rep2 1079.51350454599 1079.5124099358602 42.528 2 -0.2836917471485263 0.07394583227584206 0.7451579697566936 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 7730 15368 ASPFVVAAAA True PC9_epitope_Rep3 902.4861675993398 902.48506993586 64.27 2 -0.28371541339936457 0.07394583227584206 0.7451828215670132 ['GLI2|p.L35F|1|0.11|ENSG00000074047|chr2:120797425-120797425|G/C|missense_variant'] 119560 19788 VATDFFTVL True NCI_RA007_Epitope_Rep1 1011.5276980581499 1011.52717496793 81.162 1 -0.2837698719559312 0.07394583227584206 0.7452399990322465 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 23205 9369 EVLSKWKGDYE True NCI_RA007_Epitope_Rep2 1352.66123140884 1352.6601299358601 41.052 2 -0.2837771587145447 0.07394583227584206 0.7452476486213792 ['ENSG00000119900|ENST00000370435|OGFRL1'] 99956 12698 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.55090993586 53.899 2 -0.2837773707089336 0.07394583227584206 0.7452478711682118 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 74084 7173 NDPRWKRYRRW True H1975_Epitope_Rep1 1631.8545605381898 1631.8529249037902 32.612 3 -0.2837786072921047 0.07394583227584206 0.7452491693009249 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 102615 16220 SLWLVHVLP True H1975_Epitope_Rep2 1062.6226015025002 1062.62150993586 67.599 2 -0.2838012147430661 0.07394583227584206 0.7452729008536043 ['ENST00000343813.9_1_1:6293667-6294963:-|nuORF'] 90752 3749 RERRDNYVP True NCI_RA007_Epitope_Rep2 1203.6108676018298 1203.60922490379 19.224 3 -0.2838225936200935 0.07394583227584206 0.7452953407252687 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 105546 13552 SSCSLHLQVV True PC9_epitope_Rep3 1071.53827982519 1071.5371899358602 57.183 2 -0.2838506826147327 0.0739572570558486 0.7453248207475845 ['ENST00000412260.5_1_17:18420776-18423033:-|nuORF'] 42887 12281 IERDGYAQI True PC9_epitope_Rep1 1063.5298233164697 1063.5287299358602 52.094 2 -0.28386067893132527 0.0739572570558486 0.7453353112887386 ['ENSG00000100412|ENST00000216254|ACO2'] 19334 14577 ELLDSDDPP True H1975_Epitope_Rep2 999.43967089939 999.43856993586 61.227 2 -0.283861310124432 0.0739572570558486 0.745335973674115 ['chr2:65048212-65055530|299|10.03|0.0|19.94|-|2|TE_info:AluJo,AluJo_dup8582,Alu,SINE,donor,+,65055530,65055630|LINC02245,None|1'] 123861 8747 VGRQPFVL True NCI_RA007_Epitope_Rep4 914.5337864980999 914.53268993586 40.443 2 -0.28387785595385456 0.0739572570558486 0.7453533365574457 ['ENST00000527132.1_1_11:11985552-11985876:-|nuORF'] 74941 18628 NHLPSLVL True PC9_epitope_Rep5 891.51780208079 891.51670993586 76.678 2 -0.28390234686177684 0.0739572570558486 0.7453790347128958 ['nc|ENSG00000159873|Q8IWD4-2|CCDC117', 'nc|ENSG00000159873|Q8IWD4-4|CCDC117', 'nc|ENSG00000159873|Q8IWD4-3|CCDC117', 'ENSG00000159873|ENST00000249064|CCDC117'] 138387 17358 YHGLTVPL True PC9_epitope_Rep3 898.4912529797799 898.49014993586 71.94 2 -0.2840469016622818 0.0740284222737819 0.7455306632731854 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 45324 8809 IQALGEHLK True NCI_RA007_Epitope_Rep1 1007.57637958607 1007.57528993586 38.266 2 -0.2840990383414664 0.0740452065471551 0.7455853296063913 ['ENST00000523639.5_1_6:99998829-100016472:-|nuORF', 'ENSG00000112237|ENST00000520429|CCNC'] 105885 7998 SSPSDFSVSLK True NCI_RA007_Epitope_Rep5 1152.56626839484 1152.56516993586 37.455 2 -0.28417011871335845 0.07406199021207178 0.7456598404216264 ['ENSG00000071051|ENST00000233154|NCK2'] 73701 6776 MYRRWWEQFVQ True NCI_RA007_Epitope_Rep4 1627.77180200067 1627.7701649037901 32.683 3 -0.2843078480744841 0.07411368085260639 0.745804156967907 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 13880 8598 DQSVMVEMSGP True H1975_Epitope_Rep3 1178.4947603307 1178.49366993586 38.064 2 -0.2843474600981809 0.07411368085260639 0.7458456489998785 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 83017 8833 PSHQEATL True PC9_epitope_Rep1 881.42429561877 881.42318993586 38.817 2 -0.2843850094633976 0.07413046236383738 0.7458849745264389 ['ENST00000521305.5_1_5:179228789-179229839:-|nuORF'] 33430 14453 GLAEVFQL True H1975_Epitope_Rep2 875.4752685624699 875.47472496793 60.749 1 -0.28442899701575713 0.07414589941096511 0.7459310354362227 ['ENSG00000004139|ENST00000585482|SARM1'] 77680 22198 NTIEHLLPLFL True PC9_epitope_Rep4 1308.7441731871597 1308.7430699358601 93.63 2 -0.2844387198212622 0.07414589941096511 0.7459412154605998 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF'] 119728 20556 VAWGLLWLLL True PC9_epitope_Rep5 1182.71650188734 1182.7154099358602 84.113 2 -0.2844496884453325 0.07416267942583732 0.7459526994260032 ['ENSG00000141696|ENST00000393928|P3H4'] 28125 6613 FRAPNTDAA True PC9_epitope_Rep5 961.4617437566499 961.46064993586 30.409 2 -0.2844954364587033 0.07419758232596915 0.7460005915490105 ['nc|ENSG00000147394|O15231-4|ZNF185', 'nc|ENSG00000147394|O15231-7|ZNF185', 'nc|ENSG00000147394|O15231|ZNF185', 'nc|ENSG00000147394|O15231-3|ZNF185', 'nc|ENSG00000147394|O15231-8|ZNF185', 'nc|ENSG00000147394|O15231-6|ZNF185', 'ENSG00000147394|ENST00000695776|ZNF185', 'nc|ENSG00000147394|O15231-5|ZNF185'] 107896 15718 SVVQGTLGV True PC9_epitope_Rep2 858.4810822188999 858.47998993586 65.734 2 -0.2845780626933489 0.07421301582123634 0.7460870687961527 ['ENSG00000163872|ENST00000305135|YEATS2'] 95596 14343 RWWFRRLFLIF True PC9_epitope_Rep5 1638.9299573245796 1638.9288699358601 60.171 2 -0.2845897309917743 0.07421301582123634 0.7460992787049541 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 71858 15081 MELLTFKD True H1975_Epitope_Rep1 995.4997690581499 995.49866993586 63.261 2 -0.28464541401287324 0.07424253406784576 0.7461575388395278 ['ENSG00000250312|ENST00000510175|ZNF718'] 117238 9982 TVLREDQL True PC9_epitope_Rep2 972.5240096600398 972.52290993586 43.726 2 -0.28467676289028165 0.07424253406784576 0.7461903331314866 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 1871 11907 AEIEDPPIP True NCI_RA007_Epitope_Rep4 979.4862271689899 979.48512993586 52.802 2 -0.2846786601614646 0.07424253406784576 0.7461923177547364 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 58884 6330 LETAMHVKEK True NCI_RA007_Epitope_Rep3 1184.62234380232 1184.62124993586 31.904 2 -0.2846808297027102 0.07424253406784576 0.7461945871659809 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 58406 7923 LENRREPA True H1975_Epitope_Rep1 983.5148419586699 983.51374993586 35.427 2 -0.28468993093676326 0.07424253406784576 0.7462041071502332 ['ENST00000541522.5_2_6:26458277-26458358:+|nuORF'] 48696 18727 KAYTSQFISL True PC9_epitope_Rep5 1156.6128246644398 1156.61172993586 77.049 2 -0.2847146767218809 0.07427743046117605 0.7462299898246681 ['ENSG00000131459|ENST00000253778|GFPT2'] 94405 7762 RRRRLWRWWW True NCI_RA007_Epitope_Rep5 1655.9174355782698 1655.91580490379 36.554 3 -0.28476246516913034 0.07429016651869032 0.7462799669057363 ['chr12:54283228-54283827|536|15.08|0.0|20.52|+|1|HNRNPA1,HNRNPA1|2'] 140694 8174 YRWQDERQYRR True H1975_Epitope_Rep3 1654.8076699154199 1654.8065699358601 36.421 2 -0.2847660158163115 0.07429016651869032 0.7462836798048325 ['ENSG00000142961|ENST00000319928|MOB3C'] 74398 13220 NESGELVAI True PC9_epitope_Rep4 930.4658260775799 930.46472993586 58.747 2 -0.2848024415161601 0.07429016651869032 0.7463217671447807 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 61580 23841 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 99.416 3 -0.28483412606559194 0.07429016651869032 0.7463548927900717 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 68900 8820 LTNLTENGL True H1975_Epitope_Rep3 973.50802524273 973.50692993586 38.933 2 -0.28498757122143936 0.07434048412813452 0.7465152612345831 ['ENST00000413422.4_1_19:44085374-44085893:+|nuORF', 'nc|ENSG00000234465|A6NC86-4|PINLYP', 'ENSG00000234465|ENST00000599207|PINLYP', 'nc|ENSG00000234465|A6NC86-2|PINLYP'] 914 4022 ADLSPGDKGP True NCI_RA007_Epitope_Rep2 955.4610750503099 955.45996993586 20.283 2 -0.28500444784443096 0.07434048412813452 0.7465328937007272 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD'] 70628 24778 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 107.14 3 -0.2850162586760901 0.07434048412813452 0.7465452328389058 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 98021 8757 SEQFGSPVA True H1975_Epitope_Rep3 920.4239612655998 920.4234149679301 38.689 1 -0.28507672267252127 0.07435590825089684 0.7466083929653897 ['ENSG00000127804|ENST00000263092|METTL16'] 2093 15028 AELESGGGSVP True H1975_Epitope_Rep2 1001.4665543535698 1001.46544993586 62.958 2 -0.2850785071419766 0.07435590825089684 0.7466102567908174 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1'] 88752 10699 QTMKVILDTN True PC9_epitope_Rep4 1161.6063593850097 1161.6052699358602 48.906 2 -0.285106948926945 0.07437267868466346 0.746639961734478 ['ENSG00000104321|ENST00000262209|TRPA1'] 38001 17250 HALLTLYIS True PC9_epitope_Rep6 1029.58588164061 1029.58478993586 78.951 2 -0.28515985448167214 0.07438675314322983 0.7466952086584235 ['nc|ENSG00000136883|Q96FN5|KIF12', 'ENSG00000136883|ENST00000640217|KIF12'] 31107 6494 GAVIRTVSG True H1975_Epitope_Rep2 858.49231560894 858.49120993586 29.896 2 -0.2851688893441757 0.07438675314322983 0.7467046422912624 ['ENSG00000165733|ENST00000374518|BMS1', 'BMS1|p.E1057K|1|0.23|ENSG00000165733|chr10:42823154-42823154|G/A|missense_variant', 'ENST00000413293.1_1_22:22663100-22664193:+|nuORF'] 136969 6133 YAHPSGTAL True PC9_epitope_Rep2 915.4450310633499 915.44392993586 28.985 2 -0.28519826135461 0.07438675314322983 0.7467353085319385 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'AFAP1|p.G490V|1|0.32|ENSG00000196526|chr4:7786255-7786255|C/A|missense_variant'] 130468 16386 VSPGLTPSL True PC9_epitope_Rep4 869.48583324617 869.48472993586 70.989 2 -0.2852184428783571 0.07439947827977247 0.7467563774125099 ['ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 59435 17807 LFNNMLLYCVP True PC9_epitope_Rep1 1325.65120140245 1325.6501099358602 73.291 2 -0.28522035839842724 0.07439947827977247 0.7467583770749537 ['ENST00000464083.5_1_6:36982408-36995936:+|nuORF', 'ENST00000494343.5_1_6:36981367-36995936:+|nuORF', 'ENSG00000146192|ENST00000274963|FGD2', 'nc|ENSG00000139132|Q96M96-2|FGD4', 'ENST00000493087.5_1_12:32755237-32793464:+|nuORF', 'nc|ENSG00000139132|Q96M96|FGD4', 'ENSG00000139132|ENST00000534526|FGD4'] 33341 4318 GKRKRKKKKRL True NCI_RA007_Epitope_Rep1 1424.9892035361997 1424.9881099358602 20.904 2 -0.2852906823375906 0.07439947827977247 0.7468317804510156 ['USP36|p.P852L|1|0.06|ENSG00000055483|chr17:78803640-78803640|G/A|missense_variant'] 100837 10466 SLELQDLAT True H1975_Epitope_Rep2 988.50769088956 988.50658993586 45.275 2 -0.28529440138604567 0.07439947827977247 0.7468356618317307 ['ENST00000305366.7_1_3:149093296-149093356:-|nuORF'] 87067 14586 QNILEPFYVL True PC9_epitope_Rep5 1234.65977485686 1234.6586699358602 61.106 2 -0.2853498828589787 0.07445247540894516 0.7468935588025297 ['nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 79577 7558 PDGQEAKALP True H1975_Epitope_Rep2 1024.5189242795998 1024.5178299358602 34.025 2 -0.285387491701909 0.07446654349164945 0.7469327984269702 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A', 'ENSG00000197213|ENST00000586855|ZSCAN5B'] 108882 8807 TAAKWKWKDWL True NCI_RA007_Epitope_Rep3 1431.7663056140698 1431.7646549037902 41.732 3 -0.2853900274640773 0.07446654349164945 0.7469354439527591 ['chr12:12330958-12335246|109|19.22|0.04|8.75|-|2|TE_info:L2a,L2a_dup119479,L2,LINE,donor,+,12335246,12335339|MANSC1,None|1'] 140154 16055 YQSDYDKTYP True PC9_epitope_Rep3 1278.54044756982 1278.5393499358602 66.907 2 -0.28545544122229116 0.07446654349164945 0.7470036809046674 ['ENSG00000175664|ENST00000380473|TEX26', 'TEX26|p.T235A|1|0.4|ENSG00000175664|chr13:30968941-30968941|A/G|missense_variant'] 80158 20477 PFSLSPSLS True PC9_epitope_Rep4 933.48074786573 933.47964993586 86.911 2 -0.28556578466266336 0.07451818577017824 0.7471187505461042 ['ENST00000357375.4_1_19:51914355-51919928:-|nuORF'] 58439 18430 LEPGEVVVP True H1975_Epitope_Rep3 937.5120479940099 937.51149496793 77.267 1 -0.2855666143406216 0.07451818577017824 0.7471196155897815 ['ENSG00000204946|ENST00000434415|ZNF783'] 84301 14877 PYRRCYFF True PC9_epitope_Rep4 1150.53822025554 1150.53658490379 65.162 3 -0.28577974771333425 0.07458928797840932 0.7473417503392542 ['ENSG00000103150|ENST00000262430|MLYCD', 'nc|ENSG00000103150|O95822-2|MLYCD'] 14657 8667 DVEVAAGA True PC9_epitope_Rep3 730.3497336961798 730.34918496793 38.287 1 -0.2858116665142106 0.07460604962869045 0.7473750029494852 ['ENST00000305901.6_1_15:53050010-53081074:-|nuORF'] 42004 17534 IDFPRHLDF True PC9_epitope_Rep5 1158.5821932425 1158.58054490379 72.45 3 -0.2859364521238704 0.0746563309365548 0.7475049678073707 ['ENST00000561423.2_1_15:101093736-101094444:-|nuORF', 'ENSG00000183943|ENST00000262848|PRKX'] 107681 5181 SVRESFHRR True PC9_epitope_Rep1 1172.61628733544 1172.61463490379 24.782 3 -0.28596749287105644 0.0746563309365548 0.7475372882294848 ['ENSG00000133030|ENST00000651222|MPRIP'] 3930 15344 AHDDSVMYL True PC9_epitope_Rep1 1049.44879611445 1049.4476899358601 63.839 2 -0.2860148419960273 0.0746563309365548 0.7475865827282228 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 33182 20849 GIVTAVVLG True PC9_epitope_Rep2 827.5116540711899 827.51054993586 85.642 2 -0.28603103169277644 0.07467173775242235 0.747603435758968 ['ENST00000474729.5_1_1:167734818-167757155:+|nuORF', 'nc|ENSG00000197965|O95297-2|MPZL1', 'ENSG00000197965|ENST00000359523|MPZL1', 'nc|ENSG00000197965|O95297-4|MPZL1', 'nc|ENSG00000197965|O95297-3|MPZL1', 'ENST00000465787.5_1_1:167691238-167742606:+|nuORF'] 11131 7116 DDEVQVVR True PC9_epitope_Rep5 958.4719740871799 958.47086993586 32.339 2 -0.2861101857948561 0.07467173775242235 0.7476858196205106 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'RPL26|p.R50Q|1|0.1|ENSG00000161970|chr17:8382162-8382162|C/T|missense_variant', 'ENST00000415894.1_1_1:165788676-165788994:+|nuORF', 'ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 100019 13385 SIQLHLAV True PC9_epitope_Rep6 879.5178020807899 879.5172549679301 63.156 1 -0.28614228914723255 0.07467902866559223 0.7477192265830835 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'LAMA3-ZNF521|1|fusion', 'LAMA3-ZNF521|2|fusion', 'ENSG00000198795|ENST00000361524|ZNF521', 'ZNF521|p.R991Gfs*14|1|0.4|ENSG00000198795|chr18:25224947-25224947|G/-|frameshift_variant'] 140268 16913 YRAPELVL True PC9_epitope_Rep5 959.5440168286299 959.54346496793 70.071 1 -0.28614575795171915 0.07467902866559223 0.747722836026563 ['nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 64146 5220 LPEVGAKG True H1975_Epitope_Rep1 769.4334037504899 769.43230993586 25.142 2 -0.2862117999618005 0.07467902866559223 0.7477915475649862 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 88089 11166 QRRQVHRRLRH True NCI_RA007_Epitope_Rep1 1540.9035764192797 1540.9019249037901 47.432 3 -0.2862310047692027 0.07467902866559223 0.7478115257895375 ['ENST00000401884.5_2_2:241974133-241976762:+|nuORF'] 64553 11695 LPSCVDDSV True H1975_Epitope_Rep2 933.4113479765699 933.41024993586 50.059 2 -0.2862363230401409 0.07467902866559223 0.7478170580098342 ['ITGAX|p.E724D|1|0.25|ENSG00000140678|chr16:31372389-31372389|G/T|missense_variant'] 29302 19339 FVDDNYVIR True PC9_epitope_Rep5 1139.56112344475 1139.56002993586 79.431 2 -0.2862450396979631 0.07467902866559223 0.7478261251170958 ['CPS1|p.H1447D|1|0.21|ENSG00000021826|chr2:210677071-210677071|C/G|missense_variant'] 6034 14880 APLAIPSAAA True PC9_epitope_Rep6 880.50181766348 880.50072993586 69.219 2 -0.2862459146775004 0.07467902866559223 0.7478270352601278 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 44987 13571 IPATPGIGA True PC9_epitope_Rep1 795.4490538146299 795.44794993586 57.056 2 -0.2863224090538162 0.07467902866559223 0.7479065934488273 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 38401 5362 HEM[Oxidation]FPAVHAA True H1975_Epitope_Rep2 1124.50731443052 1124.5062099358602 25.669 2 -0.28636591757798097 0.07469307934668454 0.7479518355273598 ['ENSG00000113638|ENST00000337702|TTC33'] 29945 7937 FWCDHMSLIVT True H1975_Epitope_Rep3 1350.6100648664599 1350.6089699358602 35.499 2 -0.28639461792090865 0.07469307934668454 0.7479816758156737 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 70657 26923 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 110.75 3 -0.2863969970063706 0.07469307934668454 0.7479841492678425 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 94372 22648 RRRQRRRRERD True H1975_Epitope_Rep2 1638.9475664895797 1638.94591490379 93.556 3 -0.28643256452281235 0.07470848120518578 0.7480211252435192 ['ENST00000452135.6_3_5:179707603-179719088:-|nuORF'] 116694 11446 TVDALFGK True H1975_Epitope_Rep1 849.45961849833 849.4590749679301 49.007 1 -0.2864379332959508 0.07470848120518578 0.7480267062388232 ['nc|ENSG00000160310|P55345-5|PRMT2'] 82502 5687 PPRPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 26.697 2 -0.28654004255547527 0.07476144779011026 0.7481328329149781 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 99930 9516 SINFYKRR True NCI_RA007_Epitope_Rep1 1082.5985120129799 1082.59740993586 41.009 2 -0.2866059290975117 0.07477549246813442 0.7482012927811309 ['ENST00000474223.1_1_X:23803122-23803970:+|nuORF', 'ENST00000462639.1_1_X:23803617-23803970:+|nuORF', 'ENSG00000130066|ENST00000379270|SAT1'] 107597 17208 SVPNKDVFQEL True PC9_epitope_Rep2 1274.65066672514 1274.6495699358602 71.448 2 -0.28663491552102016 0.07477549246813442 0.7482314066441357 ['ENSG00000115919|ENST00000264170|KYNU'] 87288 12827 QPQLPYSQA True PC9_epitope_Rep4 1030.5083595959 1030.5072699358602 57.201 2 -0.2866403748612895 0.07477549246813442 0.7482370780086001 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 63645 22772 LMPVELNLF True PC9_epitope_Rep3 1074.57835373202 1074.5772499358602 92.862 2 -0.28679676579655716 0.07478547376805822 0.7483994999423206 ['ENST00000541124.5_1_17:40995311-40995464:+|nuORF'] 134202 12715 VYLQEGKVI True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 55.962 2 -0.28685229352615416 0.07478547376805822 0.7484571492611063 ['ENSG00000134020|ENST00000256404|PEBP4'] 87045 12983 QNETGIAAL True PC9_epitope_Rep5 915.4661604307498 915.46561496793 54.948 1 -0.28685696738394384 0.07478547376805822 0.7484620012266747 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 58240 12385 LELLDFSFP True NCI_RA007_Epitope_Rep1 1079.55391280599 1079.55280993586 52.15 2 -0.2868664376593706 0.07478547376805822 0.7484718321648538 ['ENSG00000171608|ENST00000377346|PIK3CD'] 2166 9327 AELRQAFLA True NCI_RA007_Epitope_Rep3 1017.5607295219298 1017.55962993586 43.785 2 -0.28691561169177215 0.07478547376805822 0.7485228741268317 ['ENST00000553597.5_1_15:25166388-25213181:+|nuORF', 'ENSG00000273173|ENST00000577949|SNURF', 'ENST00000400100.5_1_15:25165251-25213181:+|nuORF'] 886 9084 ADIRGFVA True NCI_RA007_Epitope_Rep4 847.4552018242299 847.45410993586 41.775 2 -0.2869336795107063 0.07478547376805822 0.7485416262546755 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 116508 3806 TTRRCQCRLGP True NCI_RA007_Epitope_Rep4 1289.6444933125697 1289.6428349037901 20.821 3 -0.2870067540176208 0.07480086893555395 0.7486174574035979 ['nc|ENSG00000286025|P0DSO1|FAM246C'] 117959 14873 TYAGLHVLL True PC9_epitope_Rep6 985.55966689277 985.55856993586 69.187 2 -0.2870245517304024 0.07480086893555395 0.7486359238451742 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 82742 23857 PRIRYRKKKRI True PC9_epitope_Rep3 1512.9841181557597 1512.98302993586 97.051 2 -0.2870759416345666 0.074816262988306 0.7486892388257167 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 85145 15245 QEMEFYMRTFR True NCI_RA007_Epitope_Rep2 1536.6853550650396 1536.6842499358602 63.993 2 -0.287130241301822 0.074816262988306 0.7487455631739434 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1', 'ENSG00000159714|ENST00000565726|ZDHHC1'] 138969 13776 YKLRRKRNFRL True NCI_RA007_Epitope_Rep5 1548.9477326470399 1548.94662993586 59.663 2 -0.2871656280154414 0.07483301051716959 0.7487822641820367 ['GPR139|p.S214R|1|0.13|ENSG00000180269|chr16:20032155-20032155|G/T|missense_variant'] 1799 4342 AEHKHFQTMLK True NCI_RA007_Epitope_Rep2 1368.6972400780799 1368.6955949037902 21.526 3 -0.2872196607288605 0.07484975743972196 0.7488382958704877 ['ENST00000482518.6_1_2:229715274-230109633:-|nuORF'] 70634 25651 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 110.93 3 -0.2872625657111008 0.07486650375599602 0.7488827814184958 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 82639 21596 PQLAKFSP True PC9_epitope_Rep5 886.4912529797799 886.49070496793 88.111 1 -0.2873261131101216 0.074879183333635 0.7489486589235904 ['nc|ENSG00000115419|O94925-3|GLS', 'ENSG00000115419|ENST00000320717|GLS', 'ENST00000469774.1_1_2:191760380-191769916:+|nuORF'] 98198 15180 SETILTMVA True H1975_Epitope_Rep1 963.49468367771 963.4941349679301 63.652 1 -0.2873922541256105 0.074879183333635 0.7490172113903655 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 67250 10118 LSRPLSQAV True PC9_epitope_Rep2 969.5607295219299 969.55962993586 44.257 2 -0.28739999560544865 0.074879183333635 0.7490252342049997 ['ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 87122 18745 QNVSTTVIV True PC9_epitope_Rep4 959.52876068731 959.52821496793 80.186 1 -0.2874507161911829 0.074879183333635 0.7490777933182067 ['ENSG00000197410|ENST00000357232|DCHS2', 'DCHS2|p.E1385Kfs*12|1|0.17|ENSG00000197410|chr4:154304756-154304756|C/-|frameshift_variant', 'DCHS2|p.T1131Kfs*2|1|0.22|ENSG00000197410|chr4:154320642-154320642|G/-|frameshift_variant', 'nc|ENSG00000197410|Q6V1P9-5|DCHS2'] 41138 15319 HVAGMLAVAV True PC9_epitope_Rep5 966.5320722459398 966.53096993586 63.936 2 -0.28748820879155484 0.0748864397270934 0.7491166397053288 ['ENSG00000204052|ENST00000372441|LRRC73'] 57949 12123 LEGNAGFSI True PC9_epitope_Rep6 906.44469671018 906.44358993586 57.975 2 -0.2874896397857231 0.0748864397270934 0.7491181222817805 ['ENSG00000103326|ENST00000219611|CAPN15', 'ENST00000565010.1_1_16:602435-603513:+|nuORF'] 113345 8049 TLRRKIEEEWK True NCI_RA007_Epitope_Rep1 1486.82561139534 1486.82395490379 35.306 3 -0.2875341459637567 0.0748864397270934 0.7491642295203241 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 100888 9534 SLETDFWAV True PC9_epitope_Rep1 1066.49712620586 1066.4960299358602 41.53 2 -0.28756841786813164 0.0748864397270934 0.7491997300628941 ['nc|ENSG00000242485|Q9BYC9-2|MRPL20'] 139843 7377 YPNSGSVSA True PC9_epitope_Rep3 880.39266113732 880.3921149679301 33.385 1 -0.2875782901203601 0.0748864397270934 0.749209955547411 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 75636 14214 NLEGQLCDLDP True PC9_epitope_Rep1 1215.5441530512699 1215.5430499358602 59.497 2 -0.2876119748522248 0.0748864397270934 0.7492448432278609 ['nc|ENSG00000107821|Q96I82-2|KAZALD1', 'ENSG00000107821|ENST00000370200|KAZALD1'] 98215 5951 SETPKPDVSK True NCI_RA007_Epitope_Rep2 1086.5557037111398 1086.55460993586 27.758 2 -0.28762143703626775 0.0748864397270934 0.749254642685761 ['ENSG00000188738|ENST00000424728|FSIP2'] 127354 11365 VMSERQVTRVP True H1975_Epitope_Rep1 1300.69215469764 1300.69104993586 48.692 2 -0.28762256867670394 0.0748864397270934 0.7492558146440851 ['PLXNA2|p.Y1854Lfs*6|1|0.42|ENSG00000076356|chr1:208028034-208028038|GAGTA/-|frameshift_variant', 'ENSG00000076356|ENST00000367033|PLXNA2'] 31820 9628 GEIPKVLVA True NCI_RA007_Epitope_Rep3 924.5644179200399 924.56332993586 44.952 2 -0.2876595970961072 0.07490182594690457 0.7492941600980462 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'nc|ENSG00000183020|O94973-3|AP2A2'] 61109 20459 LIIGSIAGAIL True PC9_epitope_Rep2 1039.6641319613097 1039.66302993586 84.125 2 -0.28767974165192994 0.07490182594690457 0.7493150193633471 ['ENSG00000114948|ENST00000264377|ADAM23'] 107631 7138 SVQAVLVGK True NCI_RA007_Epitope_Rep4 899.5440168286299 899.54290993586 34.075 2 -0.2877999929926839 0.07493666304741223 0.7494395109091887 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant', 'MYCBP2|p.K641Gfs*11|1|0.09|ENSG00000005810|chr13:77257813-77257814|-/TTTTTCTTTTTGTTCCT|frameshift_variant'] 28391 13065 FRYMRIYRRYI True H1975_Epitope_Rep3 1635.8820211559898 1635.8809299358602 55.496 2 -0.2878294564512496 0.0749534029424006 0.7494700064732388 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 101192 5891 SLGYPSTTLP True H1975_Epitope_Rep2 1034.52842633414 1034.52732993586 27.645 2 -0.2878601337806621 0.0749828104078457 0.7495017555962603 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 68733 23271 LTKWPKFFF True PC9_epitope_Rep4 1212.6695516949196 1212.66790490379 97.764 3 -0.28786412727733074 0.0749828104078457 0.7495058884040257 ['ENSG00000184575|ENST00000332707|XPOT', 'XPOT|p.G138Efs*2|1|0.17|ENSG00000184575|chr12:64419015-64419015|G/-|frameshift_variant', 'XPOT|p.K328Sfs*6|1|0.09|ENSG00000184575|chr12:64421373-64421374|-/GTGCT|frameshift_variant'] 129185 7215 VQSLSLPR True NCI_RA007_Epitope_Rep5 898.5236157372199 898.52250993586 34.431 2 -0.28792137183971767 0.0749828104078457 0.749565124553985 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'nc|ENSG00000205221|Q6UXI7-3|VIT', 'VIT|p.R130S|1|0.24|ENSG00000205221|chr2:36755035-36755035|A/T|missense_variant', 'VIT|p.R130I|1|0.25|ENSG00000205221|chr2:36755034-36755034|G/T|missense_variant'] 59288 9204 LFGIKQIVI True NCI_RA007_Epitope_Rep3 1029.6586526580497 1029.65754993586 43.298 2 -0.2879219404380597 0.0749828104078457 0.7495657128841833 ['ENSG00000145723|ENST00000399004|GIN1'] 127100 6101 VLTEVDGK True PC9_epitope_Rep3 859.4650978015899 859.46400993586 28.514 2 -0.2879243556902836 0.0749828104078457 0.7495682119410253 ['ENSG00000150656|ENST00000358821|CNDP1'] 30352 6738 GAATHVVI True PC9_epitope_Rep4 766.43373810366 766.43264993586 33.109 2 -0.2879409840275094 0.07499954765049668 0.7495854167675001 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 4270 20339 AIFFQQSL True PC9_epitope_Rep1 952.5018176634799 952.50072993586 83.064 2 -0.2879763825797172 0.07505247159296519 0.7496220397555382 ['SLC5A11|p.I169F|1|0.06|ENSG00000158865|chr16:24877285-24877285|A/T|missense_variant'] 28392 13334 FRYMRIYRRYI True NCI_RA007_Epitope_Rep1 1635.8820211559898 1635.8809299358602 55.868 2 -0.28809035402798516 0.07506784874253664 0.7497399277241791 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 7989 17886 ATDFGEALV True PC9_epitope_Rep6 921.4443623570098 921.44381496793 81.424 1 -0.2881083874567306 0.07506784874253664 0.7497585772715304 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 12342 8818 DIREKHRLWHA True PC9_epitope_Rep3 1459.77966426243 1459.77802490379 38.868 3 -0.288179733078775 0.07507914970601538 0.7498323509027986 ['INSM2|p.A504Gfs*37|1|0.33|ENSG00000168348|chr14:35535763-35535763|C/-|frameshift_variant', 'ENSG00000168348|ENST00000307169|INSM2'] 89673 21088 QYVVDLTSF True PC9_epitope_Rep4 1070.5284263341398 1070.5278749679298 89.276 1 -0.28819871821668364 0.07507914970601538 0.7498519795790762 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 126682 18627 VLPDDLSGV True PC9_epitope_Rep4 913.47566248529 913.47456993586 79.726 2 -0.288199251121746 0.07507914970601538 0.7498525305325305 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 82189 9566 PNTVISQEP True PC9_epitope_Rep3 983.4923751785899 983.49126993586 41.747 2 -0.28820491918069513 0.07507914970601538 0.7498583905046842 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 128655 10065 VPVHDIYVSQ True PC9_epitope_Rep6 1155.59242357303 1155.5913299358601 49.305 2 -0.2882394011899761 0.07507914970601538 0.7498940379759322 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 134017 8494 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 40.145 3 -0.2883422135100331 0.0751139735147261 0.7500003044055011 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'CLPTM1|p.H106L|1|0.17|ENSG00000104853|chr19:44974446-44974446|A/T|missense_variant'] 102422 9545 SLTNRQVI True PC9_epitope_Rep3 929.52942939365 929.52832993586 41.662 2 -0.28835568196917344 0.07512934621368356 0.7500142230509842 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 137331 5386 YDHRLHTPMYF True H1975_Epitope_Rep2 1478.6765046335001 1478.67484490379 25.753 3 -0.2883896833567527 0.07512934621368356 0.7500493585796856 ['ENSG00000276240|ENST00000641792|OR4E1'] 35598 15867 GTASGFYTV True PC9_epitope_Rep2 901.4181476091701 901.4175949679301 66.289 1 -0.2884291347784767 0.0751406399797406 0.7500901217011355 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 91497 7114 RHSVARELR True NCI_RA007_Epitope_Rep5 1122.6370227800198 1122.63538490379 34.044 3 -0.2884390142299497 0.0751406399797406 0.750100328919539 ['SYT13|p.G256R|1|0.53|ENSG00000019505|chr11:45252501-45252501|C/T|missense_variant'] 100606 14923 SLCWGWFSV True PC9_epitope_Rep2 1083.48478770035 1083.4836899358602 62.663 2 -0.28844424650545564 0.0751406399797406 0.7501057346693651 ['ENSG00000074276|ENST00000261944|CDHR2'] 117679 7353 TVTSRQSEI True PC9_epitope_Rep6 1019.52473793603 1019.52364993586 37.46 2 -0.2884492188520399 0.0751406399797406 0.750110871798686 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 93816 19604 RRARFWRRHRE True NCI_RA007_Epitope_Rep1 1624.9035764192797 1624.9024699358602 80.441 2 -0.2884670665325532 0.0751406399797406 0.7501293103570714 ['FOXD4L5|p.V313F|1|0.23|ENSG00000204779|chr9:65283441-65283441|C/A|missense_variant'] 64260 11271 LPHGFTNMA True PC9_epitope_Rep6 986.4643866089401 986.46328993586 54.367 2 -0.28848749296101905 0.07517545763692932 0.7501504119037794 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 19262 11477 ELKFHYMV True PC9_epitope_Rep2 1065.53173789277 1065.53064993586 49.464 2 -0.2884924241031263 0.07518810591810157 0.7501555058450711 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000564547.1_1_16:88923507-88925305:+|nuORF', 'ENST00000561840.1_2_16:88923580-88926055:+|nuORF'] 73817 8979 NAKQWQSV True PC9_epitope_Rep5 959.4824792012299 959.48138993586 39.481 2 -0.28855485564905725 0.07518810591810157 0.7502199924647315 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF'] 107607 17949 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 74.057 2 -0.28856288067067287 0.07518810591810157 0.7502282808333631 ['ENSG00000115919|ENST00000264170|KYNU'] 74421 15566 NESVTTLLS True PC9_epitope_Rep2 962.4920408254201 962.4914949679301 65.148 1 -0.2886168512270646 0.07518810591810157 0.7502840176723715 ['HECW2|p.Q652L|1|0.23|ENSG00000138411|chr2:196318935-196318935|T/A|missense_variant'] 130969 14889 VTDLLKELV True H1975_Epitope_Rep3 1028.61176203528 1028.6106699358602 62.656 2 -0.2886680855042455 0.07524100634845991 0.7503369209758513 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2', 'ENST00000498819.1_1_9:91963122-91972225:+|nuORF'] 55520 13962 LAGPAELL True H1975_Epitope_Rep2 782.4538048418999 782.4532549679301 58.852 1 -0.28876413298404474 0.07525773195876288 0.7504360772356334 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 131525 16176 VTKQVINGI True PC9_epitope_Rep5 970.5811306133398 970.58002993586 67.211 2 -0.2888146731371049 0.07527445696406286 0.7504882427685102 ['ENSG00000149218|ENST00000278505|ENDOD1'] 68209 3973 LTDVREQNKY True H1975_Epitope_Rep2 1264.6411646706 1264.63951490379 20.353 3 -0.2888405561070473 0.07529118136439268 0.7505149553619566 ['ENSG00000176208|ENST00000321990|ATAD5'] 135298 25057 WFWKLVPARYR True PC9_epitope_Rep2 1520.8404736138398 1520.83936993586 102.05 2 -0.288850298590871 0.07532599063172553 0.7505250096344163 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 130008 7003 VSAEDLGG True PC9_epitope_Rep3 746.34464831574 746.34409496793 31.948 1 -0.28890991376569725 0.07535807291666667 0.7505865269019781 ['nc|ENSG00000131844|Q9HCC0-2|MCCC2', 'ENSG00000131844|ENST00000340941|MCCC2', 'ENST00000505435.3_1_5:70900220-70936922:+|nuORF', 'ENST00000510895.6_1_5:70898342-70931145:+|nuORF'] 99583 8956 SIERKSDGP True H1975_Epitope_Rep2 987.4985231881899 987.4974299358599 39.403 2 -0.28891902428870214 0.07535807291666667 0.7505959272352872 ['ENSG00000107036|ENST00000414202|RIC1', 'nc|ENSG00000107036|Q4ADV7-3|RIC1', 'nc|ENSG00000107036|Q4ADV7-2|RIC1'] 126016 5155 VLDSNVKHF True H1975_Epitope_Rep3 1057.55564414149 1057.5545499358602 24.932 2 -0.28893404451533783 0.07535807291666667 0.7506114247596185 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 49368 7673 KESYSIYVYK True NCI_RA007_Epitope_Rep5 1278.6496040959798 1278.6479549037902 36.216 3 -0.2889504470991744 0.07537479429263794 0.7506283478536253 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 12921 10164 DLKKLNCSP True PC9_epitope_Rep1 1016.5324661687599 1016.53136993586 43.972 2 -0.2889638737813091 0.07538878842676311 0.750642200055835 ['SEC24B|p.M1196Nfs*23|1|0.12|ENSG00000138802|chr4:109533679-109533680|-/A|frameshift_variant', 'nc|ENSG00000138802|O95487-2|SEC24B', 'ENSG00000138802|ENST00000265175|SEC24B', 'nc|ENSG00000138802|O95487-3|SEC24B'] 23015 18002 EVFREKNVP True PC9_epitope_Rep1 1116.5927579262 1116.5916699358602 74.038 2 -0.28896915079302393 0.07538878842676311 0.7506476441707572 ['ENSG00000122965|ENST00000261741|RBM19'] 5278 6516 ALQASALNA True PC9_epitope_Rep5 857.46068112749 857.45958993586 30.036 2 -0.288993893119851 0.07538878842676311 0.7506731689686904 ['ENSG00000109107|ENST00000226253|ALDOC'] 17858 21424 EHVLLVSIL True PC9_epitope_Rep3 1021.61718176889 1021.61608993586 87.699 2 -0.2890465686127086 0.07540005424464334 0.750727504696745 ['ENSG00000146909|ENST00000275820|NOM1'] 93815 19049 RRARFWRRHRE True H1975_Epitope_Rep3 1624.9035764192797 1624.9024699358602 79.879 2 -0.2890514282209026 0.07540005424464334 0.7507325170868515 ['FOXD4L5|p.V313F|1|0.23|ENSG00000204779|chr9:65283441-65283441|C/A|missense_variant'] 53533 18338 KRLYYREKKYK True NCI_RA007_Epitope_Rep1 1573.90928144965 1573.90818993586 75.468 2 -0.28906179121688913 0.07540005424464334 0.7507432056703415 ['ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4', 'nc|ENSG00000135124|Q99571-2|P2RX4'] 63670 20598 LMRWILIL True PC9_epitope_Rep4 1056.6517934557999 1056.65068993586 87.383 2 -0.2890673626050008 0.07540005424464334 0.7507489519802961 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant'] 46138 6699 ISKQYHQEI True PC9_epitope_Rep1 1144.5876725457601 1144.58602490379 30.57 3 -0.28906767244913273 0.07540005424464334 0.7507492715499414 ['ENSG00000033030|ENST00000633063|ZCCHC8', 'ENST00000536306.5_1_12:122967212-122983396:-|nuORF', 'ENST00000540586.1_1_12:122967996-122984530:-|nuORF', 'ENST00000543897.5_2_12:122967996-122983396:-|nuORF'] 91229 10634 RGGEVYGL True PC9_epitope_Rep5 849.4344663796498 849.43391496793 45.892 1 -0.2891036237325037 0.07543485336129896 0.7507863495047964 ['ENST00000433861.6_2_3:9773506-9775843:+|nuORF', 'ENST00000420291.1_1_3:9773506-9774924:+|nuORF'] 128175 10027 VPLSDPTGP True NCI_RA007_Epitope_Rep5 881.44944773745 881.44834993586 45.209 2 -0.2891477085088855 0.0754515703256369 0.7508318110366536 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 142673 15014 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.6228149037902 62.571 3 -0.2891752768980741 0.07548636725247704 0.7508602376956809 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 64697 20279 LPVSPSLLPV True PC9_epitope_Rep2 1020.62193279616 1020.62082993586 83.424 2 -0.2892330772668036 0.075503082680938 0.7509198308539697 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 82509 4791 PPRPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 25.002 2 -0.2892931396838185 0.07553787741818839 0.75098174669393 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 142013 22456 YVLDDLIVA True PC9_epitope_Rep3 1019.5539128059899 1019.55337496793 91.654 1 -0.2893592473545114 0.07555185941821994 0.7510498831766177 ['ENSG00000180104|ENST00000512944|EXOC3'] 109268 19465 TATLWIAVF True NCI_RA007_Epitope_Rep4 1020.5644179200398 1020.56332993586 84.14 2 -0.2894624287904784 0.07555185941821994 0.7511562080164214 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'ENST00000526482.1_1_14:92920194-92959969:+|nuORF', 'nc|ENSG00000140090|Q8NFF2-4|SLC24A4', 'nc|ENSG00000140090|Q8NFF2-2|SLC24A4'] 116943 5105 TVGARGKQ True PC9_epitope_Rep4 815.4613498338299 815.46024993586 26.292 2 -0.28953543797901593 0.07555185941821994 0.7512314244848358 ['ENST00000316881.8_1_17:54965952-54966114:-|nuORF'] 7364 17703 ARRRLEIEVP True H1975_Epitope_Rep2 1237.72550343125 1237.7244099358602 73.416 2 -0.2896501639374128 0.07559379631972814 0.7513495908765567 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 64943 13718 LQELLELDSK True NCI_RA007_Epitope_Rep1 1186.6445187155398 1186.64342993586 57.375 2 -0.289674132529924 0.07559379631972814 0.7513742739458753 ['COL28A1|p.P350Lfs*88|1|0.16|ENSG00000215018|chr7:7490624-7490624|G/-|frameshift_variant'] 102046 11219 SLQVWRGQGP True H1975_Epitope_Rep1 1126.5883412520998 1126.5872499358602 48.125 2 -0.2897224110203725 0.07559379631972814 0.7514239870819015 ['ENST00000301634.11_1_17:76170195-76170261:-|nuORF'] 91579 10714 RIKFESLEI True NCI_RA007_Epitope_Rep4 1133.6444591458899 1133.6433699358602 48.058 2 -0.28975020069848445 0.07559379631972814 0.7514525998524962 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'nc|ENSG00000046651|O75665-2|OFD1', 'ENST00000490265.5_1_X:13753187-13770868:+|nuORF'] 128576 19575 VPTLVTPSA True PC9_epitope_Rep3 883.50148331031 883.50038993586 80.53 2 -0.2898674380027645 0.07559379631972814 0.751573287945015 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 7855 13077 ATAAALAPGL True PC9_epitope_Rep1 854.48616759934 854.48506993586 55.168 2 -0.2898737291499001 0.07559379631972814 0.7515797632842394 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant', 'nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 138432 15995 YHISLEHEIL True PC9_epitope_Rep4 1252.64518742188 1252.6440899358602 69.458 2 -0.28988628240734493 0.07559379631972814 0.7515926837779923 ['ENSG00000168002|ENST00000301788|POLR2G'] 5732 12268 APAPPVYEA True PC9_epitope_Rep5 913.4545331178899 913.45342993586 52.177 2 -0.2899573685699886 0.07559379631972814 0.7516658420552561 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P162Rfs*4|1|0.1|ENSG00000169375|chr15:75413034-75413035|GG/-|frameshift_variant', 'ENST00000568919.1_1_15:75722503-75722716:-|nuORF', 'SIN3A|p.P107Hfs*15|1|0.34|ENSG00000169375|chr15:75422693-75422693|G/-|frameshift_variant'] 30134 14311 FYNPAVSRI True PC9_epitope_Rep2 1065.56072952193 1065.5596299358601 60.312 2 -0.2899603337574992 0.07559379631972814 0.7516688934014282 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 44661 17559 ILSQSAVQVL True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 72.549 2 -0.2899993471325305 0.07561050557634257 0.7517090383380246 ['ENSG00000172139|ENST00000305815|SLC9C1', 'nc|ENSG00000172139|Q4G0N8-2|SLC9C1', 'SLC9C1|p.T573Sfs*5|1|0.17|ENSG00000172139|chr3:112217513-112217514|TG/-|frameshift_variant'] 67602 12736 LSVIDMGLSTV True PC9_epitope_Rep4 1133.60021137541 1133.59910993586 56.848 2 -0.2901777079742597 0.07562584726615454 0.7518925245408175 ['OR1B1|p.G176Afs*107|1|0.34|ENSG00000280094|chr9:122629009-122629009|C/-|frameshift_variant', 'ENSG00000280094|ENST00000623530|OR1B1'] 57246 11647 LDWREVRSQEL True H1975_Epitope_Rep3 1429.73137665733 1429.7302699358602 49.935 2 -0.29019080308811324 0.07562584726615454 0.7519059928836873 ['ENST00000540943.1_1_11:63357798-63375964:-|nuORF'] 112540 20634 TLEDIEIIQ True PC9_epitope_Rep6 1072.5652057656798 1072.5641099358602 92.103 2 -0.29025140171710667 0.07564118784680174 0.7519683132393298 ['ENST00000456360.5_1_Y:23556925-23559248:-|nuORF'] 34148 11973 GNDLASRTFPS True H1975_Epitope_Rep1 1163.5571006934701 1163.5560099358602 51.059 2 -0.2902587185561815 0.07564118784680174 0.7519758373630954 ['ENST00000466134.5_1_21:45734838-45734964:+|nuORF'] 64637 8608 LPTLSDSDP True H1975_Epitope_Rep2 943.44984166027 943.44874993586 38.067 2 -0.2902629251958062 0.07567596876807403 0.751980163117556 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 14267 7589 DSSNSM[Oxidation]QTIQK True H1975_Epitope_Rep1 1253.55578074457 1253.55468993586 34.183 2 -0.29031070668847814 0.07569130670522321 0.7520292945965679 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000506277.1_1_5:36886275-36886596:+|nuORF', 'ENST00000447938.1_1_21:21797263-21797497:-|nuORF', 'ENST00000446618.1_1_22:19245879-19246326:+|nuORF'] 17744 13485 EHRKDLGL True PC9_epitope_Rep1 966.5246783663798 966.52358993586 56.726 2 -0.2903119718938149 0.07569130670522321 0.7520305954736234 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'nc|ENSG00000101624|Q8TAP6-2|CEP76'] 43788 9511 IHPKGVIP True PC9_epitope_Rep3 859.5279728416699 859.52686993586 41.531 2 -0.2904194260922698 0.07574142012903692 0.7521410653289988 ['ENSG00000175985|ENST00000322564|PLEKHD1'] 61854 19335 LLCHTLCDIL True PC9_epitope_Rep4 1142.58278748946 1142.5816899358601 82.479 2 -0.2905299094605525 0.07574142012903692 0.752254620853154 ['nc|ENSG00000148481|Q9H8M7-2|MINDY3', 'ENST00000477891.1_1_10:15883425-15902451:-|nuORF', 'ENSG00000148481|ENST00000277632|MINDY3'] 65166 17931 LQPPPPTWA True PC9_epitope_Rep5 1005.52836676449 1005.5277749679301 73.988 1 -0.29058258153538347 0.07574142012903692 0.7523087474835738 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 112613 6826 TLETVLEK True NCI_RA007_Epitope_Rep2 931.5226126777098 931.52150993586 31.166 2 -0.29069813142712514 0.07581233961036614 0.7524274657901778 ['ENSG00000105929|ENST00000310018|ATP6V0A4'] 59537 10160 LFSLSQRKR True PC9_epitope_Rep1 1133.66692592597 1133.66527490379 43.956 3 -0.2907346813891179 0.07584711303876389 0.752465011571926 ['ENSG00000205277|ENST00000536621|MUC12', 'nc|ENSG00000205277|Q9UKN1|MUC12'] 126870 14350 VLQGAVPTV True PC9_epitope_Rep6 882.51746772762 882.51636993586 67.094 2 -0.2908579797728633 0.07593335501825148 0.7525916468613624 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 8800 6938 AVDRLCLGI True NCI_RA007_Epitope_Rep3 958.5269868654999 958.52588993586 34.398 2 -0.29090295121996573 0.07593335501825148 0.7526378268658341 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 119508 13538 VASASLVGL True PC9_epitope_Rep2 815.47526856247 815.47416993586 57.366 2 -0.29091217530798186 0.07593335501825148 0.7526472982811562 ['ENST00000599637.5_1_19:53594847-53594907:-|nuORF'] 101476 16063 SLLCLPIMT True PC9_epitope_Rep4 989.52896101145 989.5278699358599 69.72 2 -0.2909823212751873 0.07594730850544804 0.7527193188838132 ['ENSG00000141506|ENST00000447110|PIK3R5', 'nc|ENSG00000141506|Q8WYR1-2|PIK3R5', 'ENST00000585260.5_1_17:8783958-8784126:-|nuORF', 'ENST00000583810.5_1_17:8783958-8785234:-|nuORF'] 14897 23087 DYATIFNNL True PC9_epitope_Rep1 1069.5080252427301 1069.50747496793 93.606 1 -0.2910070201067808 0.07594730850544804 0.7527446751877063 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 15227 17379 EAEDSSDESL True PC9_epitope_Rep4 1080.40949296992 1080.4083899358602 74.851 2 -0.2910351396444621 0.07594730850544804 0.7527735416162642 ['nc|ENSG00000204851|Q9ULN7-1|PNMA8B', 'ENSG00000204851|ENST00000599531|PNMA8B'] 85979 8549 QHKFLVAV True PC9_epitope_Rep3 940.5494365622397 940.54832993586 37.838 2 -0.2910559581133737 0.07596126047990749 0.7527949119293635 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000568870.1_1_16:89958640-89960287:+|nuORF'] 127644 9672 VPAFQPHTG True PC9_epitope_Rep4 952.4766655447999 952.47556993586 44.833 2 -0.29105739213061355 0.07596126047990749 0.7527963839236841 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 43094 11478 IEWDKPPVP True NCI_RA007_Epitope_Rep3 1079.56514619603 1079.56404993586 52.266 2 -0.2910624448956965 0.07596126047990749 0.7528015704652063 ['ENSG00000154447|ENST00000284637|SH3RF1', 'SH3RF1|p.S448Cfs*15|1|0.21|ENSG00000154447|chr4:169122103-169122104|CT/-|frameshift_variant', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 3263 4703 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.44045496793 24.777 1 -0.2910731047133422 0.07597658367361688 0.7528125123274234 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 8249 5323 ATGRRAFPP True NCI_RA007_Epitope_Rep4 971.5300980999898 971.52900993586 27.038 2 -0.2910781396173925 0.07597658367361688 0.7528176803617997 ['ENST00000264360.6_2_4:134072476-134072524:+|nuORF'] 142613 19509 YYMEKELANF True PC9_epitope_Rep2 1306.5903749676997 1306.58926993586 80.423 2 -0.29118798132291196 0.07606555007498148 0.7529304127006843 ['nc|ENSG00000105699|Q86X29-6|LSR', 'nc|ENSG00000105699|Q86X29-5|LSR', 'nc|ENSG00000105699|Q86X29-2|LSR', 'ENSG00000105699|ENST00000605618|LSR', 'nc|ENSG00000105699|Q86X29-3|LSR', 'nc|ENSG00000105699|Q86X29-4|LSR', 'nc|ENSG00000105699|Q86X29|LSR'] 101283 14923 SLIEKYFSV True PC9_epitope_Rep2 1084.580461907 1084.57936993586 62.663 2 -0.29120788201326714 0.07609618615743166 0.7529508343082716 ['ENSG00000182481|ENST00000330459|KPNA2'] 130616 19404 VSSLVQTGI True PC9_epitope_Rep1 902.50729696674 902.50618993586 79.449 2 -0.29121181203788643 0.07609618615743166 0.7529548671037154 ['ENSG00000184445|ENST00000333479|KNTC1'] 108873 12928 TAAGTLVVAV True PC9_epitope_Rep2 900.5280324113198 900.52692993586 55.022 2 -0.29121824094776483 0.07609618615743166 0.7529614640590728 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 23342 20286 EVRGPRRRR True PC9_epitope_Rep2 1180.7013543720798 1180.70024993586 83.452 2 -0.29124746319150246 0.07609618615743166 0.7529914490253441 ['chr6:34243712-34244831|167|16.51|0.7|4.56|+|1|None,HMGA1|2'] 8533 5041 ATTKCHKCTYK True NCI_RA007_Epitope_Rep4 1282.61621287606 1282.6145549037901 25.883 3 -0.2912898799774863 0.07610875259687472 0.7530349696694585 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 1800 3893 AEHKHFQTMLK True NCI_RA007_Epitope_Rep5 1368.6972400780799 1368.6955949037902 21.259 3 -0.29132346523527697 0.07610875259687472 0.7530694262336097 ['ENST00000482518.6_1_2:229715274-230109633:-|nuORF'] 44151 20445 IISTEHILI True PC9_epitope_Rep3 1037.61209638845 1037.61098993586 83.897 2 -0.2913368472707317 0.07610875259687472 0.753083154773806 ['ENSG00000164946|ENST00000380880|FREM1'] 107601 18146 SVPNKDVFQEL True PC9_epitope_Rep3 1274.65066672514 1274.6495699358602 75.0 2 -0.29135734974202754 0.07610875259687472 0.7531041873861481 ['ENSG00000115919|ENST00000264170|KYNU'] 4321 18480 AIIQCEVV True PC9_epitope_Rep4 873.4629896266099 873.46188993586 79.154 2 -0.2914076813723001 0.07616157236794566 0.7531558167038962 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 99987 19113 SIPGPGYCMGI True PC9_epitope_Rep2 1093.49363813189 1093.49254993586 78.888 2 -0.29145579928126714 0.07617688500307092 0.753205170256057 ['ENSG00000137869|ENST00000396402|CYP19A1', 'nc|ENSG00000137869|P11511-2|CYP19A1', 'CYP19A1|p.Y241*|1|0.68|ENSG00000137869|chr15:51218561-51218561|G/-|frameshift_variant'] 139546 7255 YLTHDSPSV True PC9_epitope_Rep4 1017.47672511445 1017.47562993586 35.216 2 -0.2914591933383294 0.07617688500307092 0.7532086512882079 ['ENSG00000124562|ENST00000244520|SNRPC'] 1010 8055 AEADENDMFNY True H1975_Epitope_Rep2 1317.48194671753 1317.48084993586 35.932 2 -0.2916949780694954 0.0762477645911234 0.7534504200271095 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 67267 4581 LSRRAHALPPP True NCI_RA007_Epitope_Rep3 1213.7043740638499 1213.70272490379 24.907 3 -0.2917173582871487 0.07626445086705202 0.7534733623475517 ['ENST00000440114.1_1_2:198362106-198364543:-|nuORF'] 105359 24267 SRRHRRRWLEN True PC9_epitope_Rep4 1564.8559575205197 1564.85486993586 101.82 2 -0.2917975115526555 0.07629782161049095 0.7535555205004526 ['ENST00000263864.9_1_2:85808699-85808759:+|nuORF'] 52631 4585 KLQEEEERMK True NCI_RA007_Epitope_Rep2 1318.6551004825799 1318.65346490379 22.46 3 -0.2918241559547823 0.07629782161049095 0.7535828285251978 ['nc|ENSG00000176783|Q96T51-3|RUFY1'] 73660 23720 MYIIPVVLF True PC9_epitope_Rep4 1093.6245756484498 1093.6234699358602 99.601 2 -0.29189384213055236 0.07634925222166028 0.7536542437081646 ['ENSG00000161671|ENST00000334976|EMC10'] 119589 21524 VATLLLQL True PC9_epitope_Rep3 869.55860426361 869.55750993586 88.086 2 -0.29190916315338955 0.07634925222166028 0.7536699435842037 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8'] 106577 14399 STNKLTFMDL True PC9_epitope_Rep5 1168.579810284 1168.5787099358602 60.386 2 -0.29195218039026166 0.07636593515759053 0.7537140220819277 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'SMCHD1-NDC80|5|fusion'] 57503 20363 LEDLGWQKRRE True PC9_epitope_Rep4 1428.74736107464 1428.74626993586 86.471 2 -0.2920556613259461 0.07641874074341654 0.7538200412353495 ['ENST00000562866.1_1_16:89782895-89783186:+|nuORF'] 98900 20364 SGYPGLLNGV True PC9_epitope_Rep2 975.5025459394699 975.50144993586 83.754 2 -0.2920842557260265 0.0764534831217151 0.7538493333729248 ['WDR89|p.I117Nfs*6|1|0.11|ENSG00000140006|chr14:63599593-63599594|-/T|frameshift_variant', 'ENSG00000140006|ENST00000620954|WDR89'] 62759 14298 LLLQDSAV True PC9_epitope_Rep6 857.4858332461699 857.48472993586 66.894 2 -0.29212255396643955 0.07647016327120358 0.7538885636895478 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 124266 20909 VGTLCAIAGV True PC9_epitope_Rep3 902.4895387276199 902.48844993586 85.702 2 -0.2922005490351554 0.07650352176268738 0.7539684483469836 ['ENSG00000143105|ENST00000369771|KCNA10'] 16997 18379 EGALTLAVQ True PC9_epitope_Rep2 900.4916469026 900.49109496793 76.026 1 -0.2922035924027408 0.07650352176268738 0.7539715652137924 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'ENST00000483412.5_1_9:123169248-123169542:-|nuORF'] 45790 5302 ISCTVEGAP True H1975_Epitope_Rep3 875.4058686733099 875.40476993586 25.473 2 -0.2922439119406044 0.0765119092764144 0.7540128568549832 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A', 'ENST00000526234.1_1_19:17530944-17533268:+|nuORF', 'ENST00000528997.5_1_19:17530944-17531526:+|nuORF', 'ENST00000528732.1_1_19:17530944-17531526:+|nuORF'] 107862 2544 SVVHERVP True PC9_epitope_Rep6 921.5032146458099 921.50210993586 14.714 2 -0.29227691282026497 0.0765119092764144 0.7540466511260041 ['ENSG00000198964|ENST00000361781|SGMS1'] 71957 13508 MESPFITSP True H1975_Epitope_Rep2 1007.46338354943 1007.46287496793 57.094 1 -0.29227821776097035 0.0765119092764144 0.754047987397824 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 76257 3906 NPKDNNQFASA True PC9_epitope_Rep4 1204.54726428576 1204.54616993586 21.215 2 -0.29229115524606086 0.0765119092764144 0.7540612353358446 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 103568 6165 SPSLVQGR True PC9_epitope_Rep3 842.4610154806599 842.45990993586 28.757 2 -0.2923145208432224 0.0765119092764144 0.7540851608371978 ['ENSG00000181072|ENST00000680005|CHRM2'] 137413 9191 YEAPTIVLDP True H1975_Epitope_Rep3 1116.5702911461199 1116.56918993586 40.344 2 -0.29236120855295616 0.0765119092764144 0.7541329642968476 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 56173 14613 LAVVAGVAAE True PC9_epitope_Rep6 898.5123823471799 898.51128993586 68.119 2 -0.29238995080032965 0.0765119092764144 0.7541623914420121 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 54027 11500 KVIDDTNITRL True PC9_epitope_Rep4 1286.7194149913 1286.7183099358601 51.997 2 -0.2924602518425699 0.07656331822532007 0.7542343613487746 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 71873 11711 MELRRRYQNLY True H1975_Epitope_Rep3 1540.7932657212398 1540.79216993586 50.186 2 -0.29251268730643243 0.07656331822532007 0.7542880357619565 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1', 'CCAR1|p.T1062Ifs*11|1|0.15|ENSG00000060339|chr10:68788325-68788326|-/TATAC|frameshift_variant'] 28036 6041 FQQYELDLREP True NCI_RA007_Epitope_Rep5 1436.6935941662796 1436.69194490379 29.918 3 -0.29257819772999305 0.07659528366617313 0.7543550871721794 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant'] 138427 10985 YHIQQNEALAA True PC9_epitope_Rep1 1256.6149499227602 1256.6138499358601 47.144 2 -0.29263685333997724 0.07659528366617313 0.7544151160867236 ['ENSG00000100575|ENST00000395159|TIMM9'] 95557 19493 RWSHRYDEWIY True NCI_RA007_Epitope_Rep2 1609.7426100473697 1609.7415099358602 80.751 2 -0.2926980317081083 0.07659528366617313 0.7544777204127878 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 81847 13548 PLQDSPLL True NCI_RA007_Epitope_Rep5 881.4858332461699 881.48472993586 58.799 2 -0.29277843983707735 0.07662447866827957 0.75455999286869 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 53109 7920 KPSINYYQELK True NCI_RA007_Epitope_Rep2 1381.7241660185698 1381.7230699358602 35.44 2 -0.2927852517691588 0.07662447866827957 0.7545669622316886 ['ENST00000496851.6_1_6:167347386-167366008:-|nuORF'] 9480 17411 AVVNAFYSSRR True PC9_epitope_Rep2 1268.66256882152 1268.6614699358602 72.23 2 -0.2927896264157661 0.07662447866827957 0.7545714379392673 ['MME|p.G549R|1|0.06|ENSG00000196549|chr3:155160433-155160433|G/A|missense_variant'] 14660 13553 DVFHAYLSL True PC9_epitope_Rep1 1063.53384606775 1063.53274993586 56.986 2 -0.29283725619046636 0.07662447866827957 0.7546201659299936 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'nc|ENSG00000111530|Q86VP6-3|CAND1'] 100615 7485 SLDC[Carbamidomethyl]EIVSAK True H1975_Epitope_Rep3 1120.5434250547098 1120.5423299358602 33.772 2 -0.2928858694922228 0.07662447866827957 0.7546698961748335 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 94780 5222 RSMWRWRTRPS True NCI_RA007_Epitope_Rep2 1517.7786187166098 1517.77696490379 24.932 3 -0.2929157439155814 0.07663838237949089 0.7547004550304343 ['ENST00000330978.3_1_16:29465045-29465621:-|nuORF', 'ENST00000568556.1_3_16:29458291-29465582:-|nuORF'] 117514 7921 TVRSDTSLI True PC9_epitope_Rep6 990.53457434374 990.53346993586 39.9 2 -0.29292752133059563 0.07663838237949089 0.7547125018608173 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 91299 9938 RGQGPISL True PC9_epitope_Rep2 826.4661008611 826.4650099358599 43.557 2 -0.2929565491458343 0.07663838237949089 0.7547421927216326 ['ENST00000442114.6_2_6:43971070-43971394:+|nuORF'] 67644 10839 LSVRDFDPV True H1975_Epitope_Rep2 1046.53965972418 1046.53856993586 46.721 2 -0.2930097872195443 0.07665366839976892 0.7547966432314713 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN'] 28509 5465 FSEDVLSK True NCI_RA007_Epitope_Rep5 923.4600124211499 923.45890993586 27.708 2 -0.29305148032809863 0.07665366839976892 0.7548392826118572 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant'] 81626 21199 PLLGPAALYVP True PC9_epitope_Rep3 1109.64848189717 1109.64738993586 86.832 2 -0.29320019147057585 0.07675367341781292 0.7549913460835366 ['ENST00000409179.2_1_2:128100707-128145117:-|nuORF'] 70668 13470 LWHIWRERN True PC9_epitope_Rep6 1308.68397297244 1308.68233490379 63.507 3 -0.29323916041009573 0.07675367341781292 0.7550311876687252 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 93812 19054 RRARFWRRHRE True H1975_Epitope_Rep1 1624.9035764192797 1624.9024699358602 79.425 2 -0.293299139657084 0.07675367341781292 0.7550925054094836 ['FOXD4L5|p.V313F|1|0.23|ENSG00000204779|chr9:65283441-65283441|C/A|missense_variant'] 110620 10375 TFTMKKKSW True NCI_RA007_Epitope_Rep5 1155.6110508426298 1155.6094049037902 46.536 3 -0.29330370906195824 0.07675367341781292 0.7550971765557399 ['ENST00000548811.5_1_12:51818730-51834771:+|nuORF', 'ENST00000546497.1_1_12:51818730-51834609:+|nuORF', 'ENST00000535225.6_1_12:51834522-51846003:+|nuORF'] 30147 21708 FYPALADLF True PC9_epitope_Rep6 1055.5327834385898 1055.5322749679299 96.386 1 -0.2933416780362672 0.07675367341781292 0.755135989692201 ['P3H4|p.I261L|1|0.14|ENSG00000141696|chr17:41810869-41810869|T/A|missense_variant'] 14092 5074 DRTQYIDSSK True H1975_Epitope_Rep3 1211.57823006087 1211.57712993586 24.635 2 -0.29334315232684754 0.07675367341781292 0.7551374967158433 ['ENSG00000136546|ENST00000643258|SCN7A', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 81503 11443 PLGSDGPAVT True PC9_epitope_Rep1 912.4552613938799 912.45416993586 48.893 2 -0.29343496753062037 0.07684254228415675 0.7552313439183248 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'nc|ENSG00000183337|Q6W2J9-3|BCOR', 'ENST00000490976.5_1_X:39931586-39937182:-|nuORF'] 6745 5167 AQDEERQASL True PC9_epitope_Rep1 1145.53127986845 1145.53018993586 24.728 2 -0.29348802857056755 0.07687586866663057 0.7552855734641033 ['ENSG00000184575|ENST00000332707|XPOT'] 20493 16945 EPLRGYIL True PC9_epitope_Rep5 959.54401682863 959.54290993586 70.197 2 -0.29350018223264945 0.07687586866663057 0.7552979941804843 ['nc|ENSG00000074803|Q13621-3|SLC12A1', 'ENSG00000074803|ENST00000380993|SLC12A1', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 115689 15225 TSAESFVNV True PC9_epitope_Rep6 952.45017601344 952.44906993586 70.661 2 -0.29354647420134977 0.07689114307889465 0.7553453013220632 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 79128 5590 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 26.505 2 -0.2935465005708893 0.07689114307889465 0.7553453282689784 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 79159 20163 PALVYQDYQY True PC9_epitope_Rep2 1258.58700383942 1258.58536490379 82.969 3 -0.29364395028674023 0.07694112550987257 0.7554449047483911 ['nc|ENSG00000284491|A0A1W2PP97|THSD8'] 2996 15846 AFIEKHWTF True PC9_epitope_Rep4 1177.59202965021 1177.5903749037902 68.875 3 -0.2936574132077621 0.07694112550987257 0.7554586604027401 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 45637 19785 IRDNFVIVY True PC9_epitope_Rep5 1137.61824439805 1137.61767496793 81.149 1 -0.29366454782064594 0.07694112550987257 0.755465950042462 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 48686 8631 KAVVLTLA True NCI_RA007_Epitope_Rep3 813.5323895157699 813.53128993586 41.025 2 -0.2937729827220944 0.0769911025284701 0.7555767321647463 ['CON__P15497', 'APOA4|p.A188Pfs*54|1|0.19|ENSG00000110244|chr11:116821496-116821496|C/-|frameshift_variant', 'ENSG00000110244|ENST00000357780|APOA4'] 125837 17255 VLADVIDN True PC9_epitope_Rep1 857.44944773745 857.44834993586 71.189 2 -0.29381078575482994 0.0769911025284701 0.7556153495932504 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 63775 24235 LNERQIKIWF True PC9_epitope_Rep2 1345.7506555499297 1345.7490149037899 98.76 3 -0.29383307278004617 0.0769911025284701 0.7556381158169422 ['ENSG00000172789|ENST00000312492|HOXC5'] 81293 19791 PLACLLAQ True PC9_epitope_Rep3 827.4575103233499 827.45640993586 81.356 2 -0.2939043857951502 0.07700776033207002 0.7557109575396126 ['CON__ENSEMBL:ENSBTAP00000013050'] 31595 9477 GEEPARAVHP True H1975_Epitope_Rep3 1061.52540664237 1061.5243099358602 41.458 2 -0.2939323372120219 0.07702302750306793 0.7557395062402847 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant', 'ENST00000532739.1_1_16:16450692-16458759:+|nuORF', 'ENST00000532415.5_1_16:18480742-18495490:-|nuORF', 'ENST00000534164.5_1_16:15012355-15014181:+|nuORF', 'ENST00000525846.6_1_16:18443548-18445649:-|nuORF', 'ENST00000343738.10_1_16:15227887-15231353:-|nuORF'] 69341 14403 LTVLKVDK True PC9_epitope_Rep4 914.58006798418 914.57896993586 63.311 2 -0.29397320448743924 0.07702302750306793 0.7557812448888159 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 82301 4575 PPHPPPPPP True NCI_RA007_Epitope_Rep4 931.49158733295 931.49048993586 24.003 2 -0.29407696795070776 0.0770674317472347 0.7558872107655296 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 16695 12663 EERQRHWQRER True NCI_RA007_Epitope_Rep2 1608.7981678608796 1608.79706993586 53.869 2 -0.29410690167490355 0.0770674317472347 0.7559177772025754 ['ENSG00000107816|ENST00000454422|LZTS2'] 26157 21940 FHCFFLGL True PC9_epitope_Rep2 982.4734947406598 982.47238993586 89.868 2 -0.2941095477608645 0.0770674317472347 0.755920479162908 ['ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 127834 13544 VPFAAPATA True PC9_epitope_Rep4 843.4490538146299 843.44794993586 59.992 2 -0.29423250797109685 0.0770674317472347 0.7560460258234354 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 87576 17668 QQLGTAVEL True PC9_epitope_Rep1 957.5131106231698 957.5125649679301 72.754 1 -0.29429406521418183 0.0770674317472347 0.7561088706976269 ['ENSG00000138594|ENST00000308580|TMOD3'] 102269 8956 SLSKVEVNELK True NCI_RA007_Epitope_Rep3 1244.6976169175598 1244.6965099358601 42.322 2 -0.29432834104803474 0.0770674317472347 0.7561438614499753 ['ENSG00000198707|ENST00000552810|CEP290'] 56007 10309 LASLKPAERTQ True NCI_RA007_Epitope_Rep2 1212.6826355597598 1212.68152993586 44.69 2 -0.2943815767319152 0.0770674317472347 0.756198204640381 ['ENSG00000104142|ENST00000220509|VPS18'] 112803 14658 TLIEGTSLTF True PC9_epitope_Rep6 1080.57029114612 1080.56918993586 68.306 2 -0.29440031726546967 0.07708269428555962 0.7562173342244903 ['ENSG00000153294|ENST00000283303|ADGRF4'] 75580 20133 NLDFIEVNV True PC9_epitope_Rep3 1061.53932537101 1061.53822993586 82.695 2 -0.29447314429571336 0.07708269428555962 0.7562916691057073 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 70158 21691 LVPRFQVIL True PC9_epitope_Rep2 1083.68045073179 1083.67934993586 88.912 2 -0.29449924080892526 0.07709934682977879 0.7563183043921159 ['ENST00000372070.7_1_1:46016813-46018162:+|nuORF'] 8819 19784 AVEAQQFAL True PC9_epitope_Rep4 975.5025459394699 975.50199496793 84.226 1 -0.2945618379547981 0.0771076512295008 0.756382190608114 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 93831 3529 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 17.871 3 -0.29457449950137976 0.0771076512295008 0.7563951123384358 ['ZNF14|p.H273Lfs*53|1|0.1|ENSG00000105708|chr19:19712460-19712463|GTGT/-|frameshift_variant', 'ENSG00000105708|ENST00000344099|ZNF14'] 12163 15797 DIEMMLLL True PC9_epitope_Rep5 976.4973265299999 976.49622993586 65.751 2 -0.29458919708986414 0.0771076512295008 0.7564101117163718 ['ENST00000261590.12_1_18:29126842-29127004:+|nuORF'] 138037 15172 YGAQASMGL True PC9_epitope_Rep1 896.40620302648 896.4056549679301 63.18 1 -0.29462554125644175 0.0771076512295008 0.7564472010776072 ['ENSG00000239306|ENST00000310137|RBM14'] 29747 23127 FVNILFEEV True PC9_epitope_Rep2 1108.580461907 1108.57936993586 94.45 2 -0.29463185579668794 0.0771076512295008 0.7564536449355834 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 136944 11344 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.38026993586 48.513 2 -0.29463871545508874 0.0771076512295008 0.7564606450237669 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 65219 16556 LQRRLKRLEPC True NCI_RA007_Epitope_Rep4 1410.8241719267 1410.82252490379 71.761 3 -0.29468002407036636 0.0771076512295008 0.756502798171154 ['ENSG00000186710|ENST00000335621|CFAP73'] 108380 16784 SYLERHGLINF True PC9_epitope_Rep4 1347.6935345966297 1347.69187490379 72.528 3 -0.2947390550068436 0.07712430092007938 0.7565630326286382 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 19233 12784 ELISDDIRRY True H1975_Epitope_Rep1 1278.65681473474 1278.6557099358602 54.237 2 -0.2948000763384572 0.07713260097047099 0.7566252939978285 ['ENSG00000284395|ENST00000640283|PERCC1'] 112983 13026 TLLRRYNIP True H1975_Epitope_Rep1 1144.67167695324 1144.6705699358602 55.187 2 -0.29487929851820577 0.07713260097047099 0.7567061200316109 ['ENSG00000102119|ENST00000369842|EMD', 'ENST00000485261.1_1_X:153607844-153608453:+|nuORF', 'ENST00000486738.5_1_X:153607844-153608453:+|nuORF', 'EMD|p.H131Ifs*106|1|0.38|ENSG00000102119|chrX:154380358-154380358|C/-|frameshift_variant'] 119430 6181 VAQQAYSTL True NCI_RA007_Epitope_Rep4 979.49746055903 979.49636993586 30.385 2 -0.2948862646466453 0.07713260097047099 0.7567132268669904 ['ENSG00000236699|ENST00000420470|ARHGEF38'] 119423 14200 VAQLKQLQAET True PC9_epitope_Rep2 1227.6823012065897 1227.6812099358601 59.887 2 -0.29489495397385224 0.07713260097047099 0.756722091635169 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 133350 17890 VVVEIIKAV True PC9_epitope_Rep2 968.6270181765998 968.62592993586 74.116 2 -0.2949424407050575 0.07713260097047099 0.7567705357313586 ['ENSG00000066654|ENST00000396083|THUMPD1'] 1063 10471 AEAGPLASVPA True H1975_Epitope_Rep1 981.51311062317 981.5125649679301 45.233 1 -0.2949455940190756 0.07713260097047099 0.7567737525343654 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 117347 16083 TVPDEIQEV True PC9_epitope_Rep3 1028.50260550912 1028.5015099358602 67.012 2 -0.2949986375822187 0.07713260097047099 0.7568278625274947 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant', 'ENST00000560519.1_1_15:64026898-64041594:-|nuORF'] 56028 20250 LASNVIC[Carbamidomethyl]P True PC9_epitope_Rep1 872.44258881463 872.44203496793 82.72 1 -0.29514393590726123 0.0771672859771276 0.75697606733907 ['ENSG00000174914|ENST00000642097|OR9G1'] 7475 8968 ASCMLGPEGVP True NCI_RA007_Epitope_Rep5 1059.47290268731 1059.4718099358602 41.153 2 -0.29518040701465387 0.07718393188910334 0.7570132646956899 ['GLYATL1|p.A208S|1|0.26|ENSG00000166840|chr11:58955740-58955740|G/T|missense_variant'] 53118 5630 KPTHFTVNA True PC9_epitope_Rep1 1013.5294293936499 1013.52832993586 26.482 2 -0.29522862273218375 0.0772324729902783 0.757062438546205 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 110619 10702 TFTMKKKSW True NCI_RA007_Epitope_Rep1 1155.6110508426298 1155.6094049037902 45.619 3 -0.2952537624958125 0.0772324729902783 0.7570880769952331 ['ENST00000548811.5_1_12:51818730-51834771:+|nuORF', 'ENST00000546497.1_1_12:51818730-51834609:+|nuORF', 'ENST00000535225.6_1_12:51834522-51846003:+|nuORF'] 129061 21520 VQNVDLVLA True PC9_epitope_Rep3 969.5494961318898 969.5489449679301 88.071 1 -0.29525707628955955 0.0772324729902783 0.7570914564781364 ['ENST00000424556.2_1_11:1856509-1858658:+|nuORF', 'ENSG00000149043|ENST00000341958|SYT8'] 105527 12479 SSAPGLTSV True PC9_epitope_Rep3 817.4181476091701 817.4175949679301 53.026 1 -0.29526779581954904 0.0772324729902783 0.757102388429341 ['ENSG00000115216|ENST00000379852|NRBP1'] 62386 14430 LLGPTVM[Oxidation]L True H1975_Epitope_Rep2 858.4884764789 858.4879249679301 60.658 1 -0.29545831036393977 0.07726715244210375 0.7572966604542827 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 71840 13774 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 58.127 2 -0.2955154092512462 0.07730183064297953 0.7573548791109217 ['ENSG00000100296|ENST00000490103|THOC5', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF'] 12811 15046 DLFQDYERWVR True PC9_epitope_Rep5 1525.73137665733 1525.7297249037902 62.879 3 -0.29561855703581236 0.07731847202683692 0.7574600425696651 ['ENSG00000169684|ENST00000299565|CHRNA5'] 100275 11338 SIYRELAV True PC9_epitope_Rep1 949.5232813840498 949.52218993586 48.491 2 -0.2956928725550322 0.07733232339627405 0.7575358047777803 ['ENST00000606714.5_1_6:52442273-52442435:+|nuORF'] 110481 6203 TFFPRVYYRPP True H1975_Epitope_Rep3 1441.7506555499297 1441.7490149037899 28.873 3 -0.29569567532618507 0.07733232339627405 0.7575386620209875 ['ENST00000469074.1_1_1:156697530-156698223:-|nuORF'] 19993 16615 ELWTHAQVV True PC9_epitope_Rep6 1081.55564414149 1081.5545499358602 76.373 2 -0.2957389544773167 0.07733232339627405 0.757582781495973 ['ENSG00000265203|ENST00000584701|RBP3'] 74940 18725 NHLPSLVL True PC9_epitope_Rep1 891.51780208079 891.51670993586 76.815 2 -0.2957747611854472 0.07734756812320788 0.7576192823027785 ['nc|ENSG00000159873|Q8IWD4-2|CCDC117', 'nc|ENSG00000159873|Q8IWD4-4|CCDC117', 'nc|ENSG00000159873|Q8IWD4-3|CCDC117', 'ENSG00000159873|ENST00000249064|CCDC117'] 138021 10925 YFWRLYHRMEE True NCI_RA007_Epitope_Rep5 1628.7558175833599 1628.75472993586 48.663 2 -0.29579583020682465 0.07734756812320788 0.7576407592634999 ['FPGS|p.L163M|1|0.12|ENSG00000136877|chr9:127807073-127807073|C/A|missense_variant'] 32353 8728 GFGGDDAPR True NCI_RA007_Epitope_Rep1 890.38824446322 890.38714993586 37.951 2 -0.2958131703723563 0.07736281175049141 0.7576584349085304 ['ENSG00000169067|ENST00000423391|ACTBL2'] 110694 11951 TGDTIALNIIK True H1975_Epitope_Rep3 1157.66558851329 1157.66448993586 51.125 2 -0.29585955338076675 0.07736281175049141 0.757705714139245 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 56822 17652 LDNLRRVMP True PC9_epitope_Rep1 1112.61244782496 1112.61134993586 72.691 2 -0.2959211261607791 0.07741272360069244 0.757768474102674 ['ENSG00000123307|ENST00000242994|NEUROD4'] 99772 18775 SIIQVVLIL True PC9_epitope_Rep5 996.6583183048799 996.65722993586 77.231 2 -0.2959430754524684 0.07741272360069244 0.7577908459101944 ['ENSG00000183706|ENST00000328795|OR4N4', 'ENSG00000176294|ENST00000557677|OR4N2', 'ENSG00000279408|ENST00000623441|OR4N4C'] 137298 17101 YDDKIYYF True NCI_RA007_Epitope_Rep3 1125.5018772331298 1125.5007899358602 75.139 2 -0.2959522230256314 0.07741272360069244 0.7578001694653946 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 46050 15621 ISGLVQGISV True PC9_epitope_Rep3 971.56514619603 971.56404993586 65.234 2 -0.29597256110926906 0.07742517129462675 0.7578208985947549 ['ENSG00000056291|ENST00000308744|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5-3|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5|NPFFR2'] 102933 21616 SPDLSFLVV True PC9_epitope_Rep4 975.52769805815 975.52660993586 91.336 2 -0.29601587319058625 0.07742517129462675 0.7578650424450764 ['nc|ENSG00000164306|Q96LW4-2|PRIMPOL', 'ENSG00000164306|ENST00000314970|PRIMPOL'] 125343 8106 VIQEKEKKGKE True NCI_RA007_Epitope_Rep4 1314.7507151195798 1314.74960993586 37.967 2 -0.296020414719657 0.07742517129462675 0.7578696711116936 ['ENSG00000089048|ENST00000617257|ESF1'] 84697 11608 QDLNVDQL True PC9_epitope_Rep5 943.46107505031 943.45996993586 49.647 2 -0.2960300065146945 0.07742517129462675 0.7578794468943838 ['CCDC40|p.Y442N|1|0.22|ENSG00000141519|chr17:80058864-80058864|T/A|missense_variant'] 20113 23504 EMRKMRLRE True H1975_Epitope_Rep3 1247.6590807475498 1247.65744490379 98.079 3 -0.2960456583951512 0.07744180595373325 0.7578953988649687 ['ENST00000543471.5_2_9:130187043-130190860:+|nuORF'] 24890 16617 FAYEGPMYL True H1975_Epitope_Rep1 1089.4841189940098 1089.48302993586 69.294 2 -0.29606673417055185 0.07745844001298186 0.7579168784478257 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145'] 131546 17854 VTLARSLVVL True PC9_epitope_Rep3 1069.68593003505 1069.68482993586 73.87 2 -0.2962055814866779 0.0774917063320352 0.758058378394566 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2'] 37423 10439 GVTFEAAV True H1975_Epitope_Rep2 792.4017692690398 792.40122496793 45.169 1 -0.296236191409649 0.0774917063320352 0.758089571372292 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 99957 12676 SINSHATEWSP True H1975_Epitope_Rep2 1227.55201531303 1227.55090993586 53.859 2 -0.2962964782509129 0.07750694118919699 0.7581510047805934 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 53437 16153 KREEHQRWYEK True H1975_Epitope_Rep1 1587.7906228689496 1587.7895299358602 67.478 2 -0.2963036852912769 0.07750694118919699 0.7581583487335404 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 98011 9655 SEQESLLQQA True H1975_Epitope_Rep1 1131.54078192299 1131.53968993586 42.068 2 -0.2963565302562913 0.07754160131249212 0.7582121966078131 ['ENSG00000198952|ENST00000361813|SMG5'] 110990 4610 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 25.033 2 -0.2964713033545018 0.0776123170116103 0.7583291420810355 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 108293 19903 SYIPLFPQL True NCI_RA007_Epitope_Rep5 1076.5906326678798 1076.5895299358601 83.471 2 -0.2964843846449998 0.0776275464214891 0.7583424704774713 ['ENSG00000165996|ENST00000361271|HACD1'] 130248 11167 VSFTGSVP True PC9_epitope_Rep3 792.4017692690398 792.40066993586 47.955 2 -0.29652365921412294 0.0776275464214891 0.7583824863583204 ['ENST00000491436.1_1_1:165638124-165649867:-|nuORF', 'nc|ENSG00000143149|P49189-2|ALDH9A1', 'nc|ENSG00000143149|P49189|ALDH9A1', 'ENSG00000143149|ENST00000354775|ALDH9A1'] 139509 11859 YLSKMRVWFYR True NCI_RA007_Epitope_Rep1 1547.8071248802298 1547.8060299358601 50.11 2 -0.296591968117849 0.07764417443348777 0.7584520825514607 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 111579 12915 TIDAHGLMVLP True H1975_Epitope_Rep2 1165.61653014589 1165.6154299358602 54.791 2 -0.29660228003766603 0.07765660207300586 0.7584625885795679 ['ENSG00000151640|ENST00000338492|DPYSL4'] 100208 18014 SIVPKLQAI True PC9_epitope_Rep5 967.6066170851899 967.60552993586 74.307 2 -0.2966836695741629 0.07765660207300586 0.7585455081932044 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A'] 83590 13739 PVAVVQAI True NCI_RA007_Epitope_Rep4 795.4854393233499 795.48434993586 60.073 2 -0.2967193847501512 0.07765660207300586 0.7585818937158002 ['ENST00000521314.5_1_16:67198707-67203685:+|nuORF', 'nc|ENSG00000102878|Q9ULV5-2|HSF4', 'ENSG00000102878|ENST00000521374|HSF4', 'ENST00000523562.5_1_16:67201036-67203307:+|nuORF', 'ENST00000520528.1_1_16:67201435-67203617:+|nuORF'] 100788 14148 SLEEYWQQWL True H1975_Epitope_Rep1 1380.635016661 1380.6339099358602 59.592 2 -0.2967382735245488 0.07765660207300586 0.7586011367593676 ['ENST00000380946.3_1_10:3825413-3827293:-|nuORF'] 380 8191 AALARAALA True PC9_epitope_Rep1 826.5024863698198 826.5019349679301 36.341 1 -0.2968952320546938 0.07774533131444228 0.7587610325095038 ['ENSG00000116032|ENST00000234389|GRIN3B', 'GRIN3B|p.A583Gfs*64|1|0.31|ENSG00000116032|chr19:1005249-1005249|C/-|frameshift_variant'] 72318 22661 MIIPSLEEL True PC9_epitope_Rep2 1043.5572839342701 1043.5567749679299 92.661 1 -0.29700260223795993 0.07777998089298267 0.7588704055543192 ['ENST00000558123.5_1_15:41625155-41634596:+|nuORF', 'nc|ENSG00000137804|Q9BXS6-7|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-4|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-6|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-3|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-5|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-2|NUSAP1', 'ENSG00000137804|ENST00000559596|NUSAP1'] 76356 8748 NPYFQQNP True PC9_epitope_Rep3 1006.4508447197799 1006.44974993586 38.603 2 -0.29701622092704577 0.07779660405926674 0.758884277936077 ['ENST00000532317.5_1_11:85669958-85670087:-|nuORF'] 141977 21541 YVIQKFFEF True PC9_epitope_Rep2 1219.62774645259 1219.62664993586 88.324 2 -0.297089049635952 0.07784927630274519 0.7589584620530719 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 29045 14119 FTETDDPEEYY True H1975_Epitope_Rep1 1407.53542175903 1407.5343299358601 59.478 2 -0.297151979320972 0.07786589762076424 0.759022561265724 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 88611 4632 QTDRANRFEY True H1975_Epitope_Rep2 1298.6003624877799 1298.59870490379 22.917 3 -0.29719183402392224 0.07791856671653359 0.7590631559010043 ['ENSG00000153147|ENST00000283131|SMARCA5', 'SMARCA5|p.F300Lfs*9|1|0.09|ENSG00000153147|chr4:143527965-143527966|-/ACATCACG|frameshift_variant'] 39200 13051 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45940496793 55.481 1 -0.2973054496558908 0.07797123391370174 0.7591788778764924 ['ENSG00000132646|ENST00000379143|PCNA'] 141073 12855 YSNMLGEENTY True H1975_Epitope_Rep1 1319.5339822903898 1319.53288993586 54.516 2 -0.2974288113083145 0.07798785213488817 0.7593045219188371 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'SLC25A3|p.A284Lfs*8|1|0.17|ENSG00000075415|chr12:98601203-98601203|G/-|frameshift_variant'] 52419 27277 KKRKRKKREKL True PC9_epitope_Rep1 1497.0103329035994 1497.00868490379 111.46 3 -0.2974766018229751 0.07800165807591104 0.759353195458401 ['ENSG00000065183|ENST00000349139|WDR3'] 52420 27086 KKRKRKKREKL True PC9_epitope_Rep3 1497.0103329035994 1497.00868490379 111.43 3 -0.2974824118798499 0.07800165807591104 0.7593591128256906 ['ENSG00000065183|ENST00000349139|WDR3'] 44729 6699 ILWEEERAERR True NCI_RA007_Epitope_Rep2 1485.7688247952099 1485.76717490379 30.671 3 -0.2974890470048286 0.07800165807591104 0.7593658704890358 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44', 'ENSG00000155275|ENST00000389737|TRMT44'] 33816 23660 GLLWGLLA True PC9_epitope_Rep2 841.5061747679299 841.5056249679301 96.48 1 -0.29750098338920583 0.07801686851211073 0.7593780272872487 ['ENST00000295598.9_1_1:116941306-116941363:+|nuORF'] 84612 8119 QDDEARVQY True H1975_Epitope_Rep1 1122.4941660837399 1122.4930699358601 36.175 2 -0.29753002045623944 0.07801686851211073 0.7594076003922711 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000443754.1_1_9:67328347-67334199:-|nuORF'] 107606 17854 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 73.694 2 -0.2975917223502101 0.07803348411396853 0.7594704406462846 ['ENSG00000115919|ENST00000264170|KYNU'] 37324 16901 GVSDVDYSL True PC9_epitope_Rep4 953.43419159613 953.43364496793 72.994 1 -0.29770269817541667 0.07804728609529302 0.7595834617557231 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 130665 6406 VSTGDVNVE True NCI_RA007_Epitope_Rep4 918.42944056886 918.42834993586 31.242 2 -0.29774282177004513 0.07804728609529302 0.7596243242154491 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'KRT10|p.R295Q|1|0.08|ENSG00000186395|chr17:40820407-40820407|C/T|missense_variant'] 66915 15257 LSNNQLSYL True PC9_epitope_Rep3 1050.53457434374 1050.53346993586 63.834 2 -0.2977937397710635 0.07804728609529302 0.7596761794377358 ['nc|ENSG00000132000|Q6PEZ8-3|PODNL1', 'nc|ENSG00000132000|Q6PEZ8|PODNL1', 'ENSG00000132000|ENST00000588872|PODNL1'] 138038 15077 YGAQASMGL True PC9_epitope_Rep5 896.40620302648 896.4056549679301 63.001 1 -0.29780877660411187 0.07805967997693528 0.7596914929616074 ['ENSG00000239306|ENST00000310137|RBM14'] 46437 9248 ISSYSLEH True H1975_Epitope_Rep2 934.43961132974 934.43850993586 40.529 2 -0.29781066709741344 0.07805967997693528 0.7596934182390223 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159681329-159707642:-|nuORF'] 95831 4013 RYIRDAHTF True NCI_RA007_Epitope_Rep3 1177.59924028897 1177.5976049037902 22.225 3 -0.2978397060795199 0.07805967997693528 0.7597229914524936 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 108864 4275 TAAEKTATDK True NCI_RA007_Epitope_Rep4 1034.5244035828598 1034.5233099358602 22.778 2 -0.2978594491099174 0.07805967997693528 0.7597430976225293 ['ENSG00000124383|ENST00000244230|MPHOSPH10'] 132482 15920 VVDGNFEEV True PC9_epitope_Rep3 1006.46074069714 1006.46017496793 66.383 1 -0.2979308755344286 0.07806785218817001 0.7598158373574798 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 106420 4989 STIKEVAQA True PC9_epitope_Rep2 945.5131106231698 945.51200993586 24.56 2 -0.2979630642297181 0.07806785218817001 0.7598486176899483 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 14552 5898 DTSVKPQAL True NCI_RA007_Epitope_Rep3 957.5131106231698 957.51200993586 30.174 2 -0.2979759719829548 0.07806785218817001 0.7598617626576116 ['ENSG00000171169|ENST00000373078|NAIF1', 'ENST00000488519.1_1_9:130825709-130828462:-|nuORF'] 28177 10960 FRDSGLLG True PC9_epitope_Rep5 863.4501164437899 863.44900993586 47.147 2 -0.29805990967313223 0.07806785218817001 0.759947242511215 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 67589 8368 LSVASKNVG True PC9_epitope_Rep4 873.49198125577 873.49088993586 39.645 2 -0.2980634450811549 0.07806785218817001 0.7599508428600859 ['ENST00000392459.3_1_6:127676988-127677414:+|nuORF'] 11271 8907 DEGIFISK True NCI_RA007_Epitope_Rep1 907.46509780159 907.46400993586 38.646 2 -0.29806512899985116 0.07806785218817001 0.759952557709816 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'SCRIB|p.P1129S|1|0.44|ENSG00000180900|chr8:143803676-143803676|G/A|missense_variant'] 33691 21469 GLGVGLLYL True PC9_epitope_Rep4 903.5429541994699 903.54184993586 90.77 2 -0.29809033199941537 0.07806785218817001 0.7599782236233673 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 47392 15634 IVISKLTQI True PC9_epitope_Rep6 1013.6484818971699 1013.64738993586 72.338 2 -0.29813907701425413 0.07808446238108965 0.760027863829211 ['ENSG00000113141|ENST00000417647|IK'] 133843 17415 VYGIRLEHF True PC9_epitope_Rep3 1132.60292868708 1132.60129490379 72.157 3 -0.2981610307893844 0.07813288174677524 0.7600502207325803 ['ENSG00000143228|ENST00000271452|NUF2', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF', 'ENST00000490881.5_1_1:163291794-163297702:+|nuORF'] 139984 4223 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 22.618 2 -0.2981788810336232 0.07813288174677524 0.7600683987349798 ['ENSG00000146648|ENST00000275493|EGFR'] 7462 7663 ASASALQT True PC9_epitope_Rep1 747.3762827971901 747.37573496793 34.298 1 -0.2981984439189313 0.07813288174677524 0.7600883208082818 ['ENST00000415814.6_2_3:17550096-17784135:-|nuORF', 'ENST00000485432.1_1_3:17665388-17784150:-|nuORF', 'ENST00000471679.1_1_3:17688462-17784150:-|nuORF'] 9577 15988 AWWLMVLL True PC9_epitope_Rep5 1030.5673951254998 1030.5662899358601 66.489 2 -0.2982135803311475 0.07813288174677524 0.7601037351247087 ['ENST00000252699.6_1_19:39220957-39221242:+|nuORF'] 139336 22082 YLLIPLLER True PC9_epitope_Rep2 1128.69068106232 1128.68958993586 90.41 2 -0.29823791997717164 0.07814948927200994 0.7601285216294973 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7'] 25237 13275 FDIAEGVRTVL True NCI_RA007_Epitope_Rep3 1218.66083748602 1218.6597499358602 59.488 2 -0.298283664836721 0.07816468807984003 0.7601751062911968 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 99722 17383 SIHRRRTDP True H1975_Epitope_Rep2 1136.61628733544 1136.6151899358601 72.157 2 -0.29831172373759407 0.07816468807984003 0.7602036802923433 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.E1748Rfs*44|1|0.18|ENSG00000122728|chr9:32630339-32630339|T/-|frameshift_variant', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 64257 11956 LPHGFTNMA True PC9_epitope_Rep4 986.4643866089401 986.46328993586 53.778 2 -0.298328327012652 0.07817988579251707 0.7602205883650789 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 77627 8324 NTEPVETSSP True NCI_RA007_Epitope_Rep5 1059.47203365683 1059.47147496793 38.694 1 -0.2983420068107503 0.07817988579251707 0.760234519292578 ['PLXDC2|p.R391P|1|0.24|ENSG00000120594|chr10:20217475-20217475|G/C|missense_variant'] 114696 14256 TQHLEVVL True PC9_epitope_Rep6 937.5232813840498 937.52218993586 66.726 2 -0.2983505925920046 0.07818944865721644 0.7602432626892671 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 37465 16195 GVTSQVLGV True PC9_epitope_Rep1 858.4810822188999 858.47998993586 67.111 2 -0.2983724433323769 0.07818944865721644 0.7602655145624375 ['nc|ENSG00000140995|Q6ZN54|DEF8'] 29328 16284 FVDEPLIHATT True PC9_epitope_Rep5 1241.6292030045697 1241.62810993586 67.631 2 -0.2984080713522806 0.07818944865721644 0.7603017966523208 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 57014 6230 LDRMMKKLDTN True NCI_RA007_Epitope_Rep2 1363.6951914727497 1363.69354490379 28.839 3 -0.2984401371351892 0.07818944865721644 0.7603344511354858 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 128885 5536 VQETTFHVAP True NCI_RA007_Epitope_Rep5 1127.56112344475 1127.55946490379 27.98 3 -0.29844373946205394 0.07818944865721644 0.7603381196000498 ['DYRK1A|p.S645Ifs*30|1|0.1|ENSG00000157540|chr21:37512171-37512172|-/A|frameshift_variant', 'DYRK1A|p.S671Lfs*32|1|0.16|ENSG00000157540|chr21:37512248-37512248|C/-|frameshift_variant', 'ENSG00000157540|ENST00000647188|DYRK1A', 'nc|ENSG00000157540|Q13627|DYRK1A'] 84562 7355 QAVDYDWDP True PC9_epitope_Rep3 1107.45090428943 1107.44980993586 33.3 2 -0.2984795556458003 0.07818944865721644 0.7603745933867624 ['ENSG00000081479|ENST00000649046|LRP2'] 73833 15934 NALLSLVGSDP True H1975_Epitope_Rep1 1084.57643915572 1084.5758749679298 66.602 1 -0.29854838584615256 0.07820464328812521 0.7604446875272906 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1'] 108201 10458 SYGQQSSF True PC9_epitope_Rep6 902.3770110731799 902.37590993586 50.981 2 -0.2985500836731777 0.07820464328812521 0.7604464165355025 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1'] 139694 18150 YNILRGIGKL True PC9_epitope_Rep2 1145.6920780446499 1145.69044490379 75.116 3 -0.2985692681490264 0.07822124563236195 0.7604659533552504 ['ENST00000525494.1_1_11:70016194-70034107:+|nuORF', 'nc|ENSG00000131620|Q5XXA6-2|ANO1', 'nc|ENSG00000131620|Q5XXA6-4|ANO1', 'ENSG00000131620|ENST00000355303|ANO1', 'nc|ENSG00000131620|Q5XXA6-5|ANO1'] 79384 7335 PASPALTAA True PC9_epitope_Rep4 797.42831837005 797.4272299358599 35.544 2 -0.2986518512985163 0.07825585793274858 0.7605500535798541 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 80947 4984 PIEHGIITN True NCI_RA007_Epitope_Rep3 992.52909504048 992.52798993586 26.602 2 -0.2986746337394586 0.07827245875657374 0.7605732546546607 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 93646 16878 RQRFRQFQYRE True H1975_Epitope_Rep2 1612.8334907404399 1612.8323899358602 70.167 2 -0.29872643051507636 0.07828482927532056 0.7606260034262194 ['nc|ENSG00000173275|Q6P9G9-3|ZNF449', 'nc|ENSG00000173275|Q6P9G9-2|ZNF449', 'ZNF449|p.T406Sfs*16|1|0.28|ENSG00000173275|chrX:135360735-135360750|ACATATAAATGTCTTG/-|frameshift_variant', 'ENSG00000173275|ENST00000339249|ZNF449'] 16048 9924 EDWKLWRCRLR True NCI_RA007_Epitope_Rep2 1559.8143355189898 1559.81269490379 43.228 3 -0.29873803629794593 0.07828482927532056 0.7606378225612603 ['ENSG00000165197|ENST00000297904|VEGFD'] 16996 18845 EGALTLAVQ True PC9_epitope_Rep1 900.4916469026 900.49109496793 77.272 1 -0.298749879937666 0.07828482927532056 0.7606498839435601 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'ENST00000483412.5_1_9:123169248-123169542:-|nuORF'] 81313 20063 PLAIFALL True H1975_Epitope_Rep3 856.5422259234799 856.54112993586 83.963 2 -0.29876431612177423 0.07828482927532056 0.7606645855586736 ['ENSG00000182327|ENST00000331264|GLTPD2'] 26001 16222 FGFLYLLTF True NCI_RA007_Epitope_Rep2 1119.60046907559 1119.59936993586 67.828 2 -0.29882315605252885 0.07831802629209436 0.7607245076546031 ['nc|ENSG00000285010|A0A2R8YFL7|OOSP4A'] 15991 15348 EDRPGGHIVAE True PC9_epitope_Rep1 1178.5679997303398 1178.5669099358602 63.854 2 -0.2988259337038693 0.07831802629209436 0.7607273364043788 ['nc|ENSG00000177679|A6NNA2|SRRM3', 'ENSG00000177679|ENST00000611745|SRRM3'] 79133 2555 PALPPQAH True PC9_epitope_Rep6 829.44463714053 829.44354993586 14.756 2 -0.29890096365672303 0.07833039219217056 0.7608037471056981 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 57711 5838 LEELDRRQEK True H1975_Epitope_Rep1 1314.6891774921799 1314.68752490379 27.527 3 -0.29895293396450445 0.07833039219217056 0.760856674387701 ['ENSG00000152578|ENST00000282499|GRIA4', 'ENST00000525032.1_1_11:105481676-105732994:+|nuORF', 'nc|ENSG00000152578|P48058-2|GRIA4'] 130759 16515 VSYQSVLS True PC9_epitope_Rep2 881.4494477374499 881.44834993586 68.766 2 -0.2989534501252767 0.07833039219217056 0.7608572000555648 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF', 'ENST00000590884.5_1_18:43437816-43458370:-|nuORF'] 78872 13405 PAFLSGPGAAE True NCI_RA007_Epitope_Rep3 1015.4974605590297 1015.49636993586 60.008 2 -0.2989645954476929 0.07833039219217056 0.7608685506748785 ['ENSG00000132478|ENST00000589666|UNK'] 130749 6397 VSYGKSSGVP True PC9_epitope_Rep1 979.49746055903 979.49636993586 29.415 2 -0.2989955163157093 0.07834275631099427 0.7609000412363839 ['ENST00000552252.1_1_14:25042845-25044048:-|nuORF', 'ENSG00000100448|ENST00000216336|CTSG'] 33443 16032 GLALPHDLAVQ True PC9_epitope_Rep3 1132.62405805448 1132.62296993586 66.817 2 -0.2990065598928519 0.07834275631099427 0.7609112883309781 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1', 'ENST00000487671.1_1_22:31840579-31845472:-|nuORF'] 78640 17139 NYTEFTQFL True PC9_epitope_Rep5 1161.53423999057 1161.5331499358601 70.946 2 -0.2990284721400927 0.07834275631099427 0.7609336044669398 ['nc|ENSG00000115840|O75746-2|SLC25A12', 'ENSG00000115840|ENST00000422440|SLC25A12'] 80607 19483 PGQVALFQEV True PC9_epitope_Rep5 1086.57095985246 1086.5698699358602 79.994 2 -0.29907269868250347 0.07834275631099427 0.7609786465214999 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 112334 9910 TLADGFTSPTP True H1975_Epitope_Rep3 1105.52915461013 1105.52804993586 43.151 2 -0.299130419132197 0.0783565294107056 0.7610374319933902 ['ENSG00000138443|ENST00000261018|ABI2'] 77488 15468 NTCFMCSQSP True PC9_epitope_Rep3 1116.40383715132 1116.4027299358602 64.65 2 -0.29915859362566144 0.0783565294107056 0.7610661266455337 ['ENST00000367091.7_1_1:207078149-207078371:-|nuORF'] 16573 9930 EELYLNDNP True H1975_Epitope_Rep2 1105.49276910141 1105.49166993586 43.184 2 -0.2991732100783162 0.0783565294107056 0.7610810130286405 ['nc|ENSG00000108061|Q9UQ13-2|SHOC2', 'ENSG00000108061|ENST00000369452|SHOC2'] 14792 12821 DVPSPVRRTP True PC9_epitope_Rep3 1122.61455599994 1122.6134499358602 54.337 2 -0.29921508251048845 0.07835901497695852 0.7611236590595205 ['ENST00000273854.7_2_4:66468008-66535587:-|nuORF'] 44723 11979 ILVSRDLP True PC9_epitope_Rep3 911.54401682863 911.54290993586 51.102 2 -0.29921666569430044 0.07835901497695852 0.7611252715022734 ['ENST00000417689.5_1_16:66968640-66968817:+|nuORF', 'ENST00000561697.5_1_16:66968640-66972065:+|nuORF'] 139073 15195 YLDDPTNSWY True H1975_Epitope_Rep1 1272.52988288612 1272.52878993586 63.711 2 -0.2992271667236359 0.07835901497695852 0.7611359666196504 ['ENSG00000064195|ENST00000434704|DLX3'] 103249 12684 SPLHLAVEA True PC9_epitope_Rep4 935.5076313199099 935.50652993586 56.638 2 -0.29925491990870556 0.07835901497695852 0.7611642329106582 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 67352 6752 LSSGNSEDCSP True H1975_Epitope_Rep3 1094.41861818498 1094.41752993586 30.924 2 -0.2993015649430803 0.07835901497695852 0.7612117408297641 ['ENST00000566799.5_1_15:69018666-69018927:+|nuORF'] 126794 12655 VLPNRPFGLF True NCI_RA007_Epitope_Rep5 1158.6549642599398 1158.65386993586 55.332 2 -0.2993415123707507 0.07835901497695852 0.7612524277574728 ['ENSG00000005187|ENST00000289416|ACSM3'] 117237 19032 TVLQSQLLT True PC9_epitope_Rep6 1001.5757108797299 1001.57517496793 85.849 1 -0.2993988799179116 0.07835901497695852 0.7613108581385992 ['ENST00000406641.5_1_7:50772961-50823704:-|nuORF', 'ENST00000403097.5_1_7:50778658-50860317:-|nuORF'] 88808 11662 QTVAVGVIKA True PC9_epitope_Rep5 984.5967806774798 984.59568993586 49.853 2 -0.2994588760155976 0.07835901497695852 0.761371966883667 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 76145 18854 NMVDIIHSV True PC9_epitope_Rep4 1026.51681610462 1026.51570993586 80.608 2 -0.2995362429163723 0.07835901497695852 0.7614507703286512 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 77453 16850 NSVAQTALLAE True PC9_epitope_Rep3 1115.5822528121498 1115.5811499358601 69.966 2 -0.2995435531381125 0.07835901497695852 0.7614582163909719 ['ENSG00000237988|ENST00000641137|OR2I1P', 'nc|ENSG00000237988|Q8NGU4|OR2I1P'] 121948 19626 VFSVKTEMI True PC9_epitope_Rep4 1052.55761828744 1052.55652993586 83.608 2 -0.2995478462004241 0.07835901497695852 0.7614625892367421 ['ENSG00000116918|ENST00000366639|TSNAX'] 114235 17938 TPMPPISSV True PC9_epitope_Rep1 927.47355431031 927.47244993586 73.791 2 -0.29962948167713144 0.07840455019979121 0.7615457430786774 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 25976 9394 FGDGYNGY True H1975_Epitope_Rep1 891.33989728847 891.3393449679301 41.046 1 -0.2996501098536329 0.07840455019979121 0.7615667553022857 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF'] 75783 22278 NLLTVIQL True PC9_epitope_Rep4 912.5644179200399 912.56386496793 93.932 1 -0.2996968941360589 0.07840455019979121 0.7616144111742758 ['nc|ENSG00000147874|Q7Z4H7-2|HAUS6', 'nc|ENSG00000147874|Q7Z4H7-3|HAUS6', 'ENSG00000147874|ENST00000380502|HAUS6'] 56852 5964 LDPGGQSFP True H1975_Epitope_Rep2 916.42904664604 916.4279499358599 27.922 2 -0.2997044040112406 0.07840455019979121 0.7616220610339616 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO'] 79013 12281 PALALAAT True PC9_epitope_Rep3 726.4275900940601 726.4270449679301 52.267 1 -0.29971735587559606 0.07840455019979121 0.7616352543716479 ['ENST00000551489.5_1_12:107349705-107350883:+|nuORF'] 68571 15965 LTGTWTSV True PC9_epitope_Rep3 863.43888305375 863.43778993586 66.556 2 -0.2997336484642463 0.07840455019979121 0.7616518508079421 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 37742 21599 GWRRGRPWWRW True PC9_epitope_Rep4 1597.8279518675297 1597.82684993586 91.265 2 -0.29981881017134265 0.07841972642188624 0.7617386024001294 ['ENST00000569487.1_1_16:87741959-87742978:-|nuORF'] 90845 9103 REVDPLRIPP True H1975_Epitope_Rep1 1190.6771562565 1190.6760499358602 39.918 2 -0.299836339362722 0.07841972642188624 0.7617564591984631 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 84185 9531 PYKVTQDEL True PC9_epitope_Rep4 1091.54989005471 1091.5487899358602 44.274 2 -0.2998745655393224 0.07843490155142004 0.7617954002217134 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 111473 21403 THVDILNDFTL True PC9_epitope_Rep2 1286.65066672514 1286.6495699358602 87.798 2 -0.2998754250573202 0.07843490155142004 0.7617962758199092 ['ENSG00000114491|ENST00000232607|UMPS', 'nc|ENSG00000114491|P11172-4|UMPS', 'nc|ENSG00000114491|P11172-2|UMPS', 'nc|ENSG00000114491|P11172-3|UMPS'] 114132 13042 TPHPFPAV True PC9_epitope_Rep3 864.4493881678 864.44828993586 55.192 2 -0.2999046550592882 0.0784514875006749 0.7618260528488023 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 133035 9891 VVPISEKDV True PC9_epitope_Rep4 984.54916177872 984.54806993586 45.698 2 -0.29993698317056544 0.07846807285292635 0.761858986379554 ['ENST00000316902.11_1_14:23652148-23652238:-|nuORF'] 121138 12259 VERSTDQVI True PC9_epitope_Rep1 1045.54038800017 1045.53928993586 52.014 2 -0.29997834755183655 0.07848324514991181 0.7619011260479903 ['ENSG00000169902|ENST00000304842|TPST1'] 16893 13935 EFLGAPVG True NCI_RA007_Epitope_Rep4 788.4068546494799 788.40630496793 60.877 1 -0.29998290265711847 0.07848324514991181 0.7619057665736235 ['IKZF4|p.P387Hfs*56|1|0.17|ENSG00000123411|chr12:56034732-56034732|C/-|frameshift_variant', 'nc|ENSG00000123411|Q9H2S9-2|IKZF4', 'ENST00000551124.5_1_12:56418779-56429112:+|nuORF', 'ENSG00000123411|ENST00000547167|IKZF4'] 117713 19388 TVVAPEQNL True PC9_epitope_Rep4 969.5131106231701 969.51200993586 82.686 2 -0.3000999122641121 0.07853582162074613 0.7620249735310921 ['nc|ENSG00000118733|Q96PB7-4|OLFM3', 'nc|ENSG00000118733|Q96PB7-2|OLFM3', 'OLFM3|p.G402Wfs*27|1|0.2|ENSG00000118733|chr1:101804471-101804472|-/A|frameshift_variant', 'ENSG00000118733|ENST00000370103|OLFM3', 'nc|ENSG00000118733|Q96PB7|OLFM3'] 34622 7428 GPWRQPER True NCI_RA007_Epitope_Rep3 1024.5202616922797 1024.5191699358602 36.343 2 -0.3001183903668401 0.07854957710995142 0.7620437991969172 ['ENSG00000163481|ENST00000295704|RNF25'] 59564 8545 LFTVRKWEWGP True NCI_RA007_Epitope_Rep5 1417.7506555499297 1417.7490149037899 39.551 3 -0.30017369517401904 0.07854957710995142 0.7621001451931274 ['ENST00000534358.5_2_11:118393008-118393158:+|nuORF'] 6534 10497 APTLPGSAA True PC9_epitope_Rep5 783.41266830591 783.41156993586 45.363 2 -0.30018093974769927 0.07854957710995142 0.7621075262609539 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 45752 4690 ISAGGYIK True NCI_RA007_Epitope_Rep5 807.44905381463 807.44794993586 24.727 2 -0.3002155040942415 0.078566158607907 0.7621427421698922 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 118405 14243 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47107496793 60.053 1 -0.3002475685864528 0.07857708363322298 0.7621754116077686 ['nc|ENSG00000122958|O75436-2|VPS26A', 'ENSG00000122958|ENST00000263559|VPS26A'] 89593 6850 QYNPVKQQL True NCI_RA007_Epitope_Rep5 1116.5927579262 1116.5916699358602 33.033 2 -0.30027837551990594 0.07857708363322298 0.76220680022715 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 37283 5499 GVRTIEIK True PC9_epitope_Rep5 914.5549158654999 914.55380993586 26.161 2 -0.3002786036299536 0.07857708363322298 0.7622070326460112 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A', 'FAM135A|p.S926Ffs*3|1|0.11|ENSG00000082269|chr6:70525854-70525855|-/T|frameshift_variant'] 45838 15288 ISDLPSSMSS True H1975_Epitope_Rep1 1022.4590264449802 1022.4584749679301 64.075 1 -0.30036456394468564 0.07857708363322298 0.7622946185071283 ['ENSG00000277399|ENST00000616987|GPR179', 'nc|ENSG00000277399|Q6PRD1|GPR179'] 102457 4479 SLTWKRWRRCW True NCI_RA007_Epitope_Rep4 1576.8197552525999 1576.81757987172 23.607 4 -0.3003740408908144 0.07857708363322298 0.7623042748920819 ['ENST00000415950.4_2_19:35528037-35528250:+|nuORF'] 41149 15839 HVDGFIANV True PC9_epitope_Rep5 970.4872302284999 970.48612993586 65.915 2 -0.3004690165312646 0.07859224873151247 0.7624010513616544 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000473864.1_1_3:156528118-156528448:-|nuORF', 'ENST00000414718.1_1_20:12360810-12361446:+|nuORF'] 6172 8991 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51397496793 39.937 1 -0.30048202426857573 0.07859224873151247 0.7624143061026952 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 128575 19426 VPTLVTPSA True PC9_epitope_Rep2 883.50148331031 883.50038993586 80.1 2 -0.30051688157536144 0.07860882707497437 0.762449825755145 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 128613 7656 VPTVTTSSA True PC9_epitope_Rep5 861.44436235701 861.44326993586 34.394 2 -0.3005343834850554 0.07862540482187837 0.762467660473705 ['ENSG00000111676|ENST00000396684|ATN1'] 134367 7086 VYPERSTSY True PC9_epitope_Rep3 1100.51383889916 1100.51274993586 32.265 2 -0.30056525739173345 0.07863632274894305 0.7624991218672418 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 87447 6318 QPYRYTVKA True PC9_epitope_Rep1 1124.59784330664 1124.5961849037901 29.114 3 -0.3005668424156683 0.07863632274894305 0.7625007370658684 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 68572 14683 LTGTWTSV True PC9_epitope_Rep4 863.43888305375 863.43778993586 64.413 2 -0.300599447983924 0.07863632274894305 0.7625339636625532 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 68813 15871 LTLQLLWPEVQ True H1975_Epitope_Rep3 1338.75473787086 1338.75364993586 66.496 2 -0.300618066301221 0.07863632274894305 0.7625529368590889 ['ENST00000492843.5_1_7:151433267-151433363:-|nuORF'] 60590 19200 LHGVTIAPSL True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 78.893 2 -0.3006289259713351 0.07863632274894305 0.7625640036112553 ['ENST00000345732.8_1_11:60235980-60236097:+|nuORF'] 128654 9987 VPVHDIYVSQ True PC9_epitope_Rep6 1155.59242357303 1155.5913299358601 48.968 2 -0.30074063310324095 0.07872485877739 0.7626778447245817 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 40653 8658 HRPELIDYGK True PC9_epitope_Rep5 1226.64077074778 1226.6391149037902 38.246 3 -0.3008071860932314 0.07873859936318336 0.762745672507786 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 10816 8090 CSQLWDGAR True H1975_Epitope_Rep3 1034.4603638576598 1034.4592699358602 36.092 2 -0.3009123012303621 0.07873859936318336 0.7628528064283623 ['ENSG00000172270|ENST00000333511|BSG'] 18650 14984 EKYEQVIF True NCI_RA007_Epitope_Rep3 1054.5335117145798 1054.5324099358602 66.383 2 -0.3009256041116499 0.07873859936318336 0.7628663652739316 ['ENST00000559735.1_1_19:19681361-19681643:-|nuORF'] 67817 19497 LTAEDLFEA True PC9_epitope_Rep6 1007.4811417885498 1007.48004993586 87.657 2 -0.3009660208861499 0.0787537551042435 0.7629075603862759 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 102032 21284 SLQTKQRRP True PC9_epitope_Rep5 1112.6414394541198 1112.64034993586 86.922 2 -0.30097524731222824 0.0787537551042435 0.7629169646347934 ['nc|ENSG00000182132|Q9NZI2|KCNIP1', 'ENSG00000182132|ENST00000328939|KCNIP1', 'nc|ENSG00000182132|Q9NZI2-5|KCNIP1'] 11123 8453 DDDTSVCL True NCI_RA007_Epitope_Rep1 866.3327633027 866.33166993586 36.879 2 -0.3010174322885765 0.0787703266657073 0.7629599633273015 ['ENSG00000226887|ENST00000443173|ERVMER34-1'] 60084 20280 LGLQKQLDL True PC9_epitope_Rep1 1026.6073453611798 1026.6062499358602 82.835 2 -0.30107622002579026 0.07880488550716817 0.7630198869126331 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 44740 11380 ILYCVCKKWEI True H1975_Epitope_Rep1 1396.7247006958798 1396.7236099358602 48.752 2 -0.30115690869800726 0.07882145555275749 0.7631021382106001 ['nc|ENSG00000161929|Q6UWF3-2|SCIMP', 'nc|ENSG00000161929|Q6UWF3-3|SCIMP'] 11952 4213 DHNDGLGNAF True NCI_RA007_Epitope_Rep3 1058.44173658806 1058.4406299358602 23.228 2 -0.30118578047635075 0.0788366069501403 0.7631315701594653 ['ENSG00000271447|ENST00000605424|MMP28'] 131215 11430 VTERNLLEV True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 48.964 2 -0.3012211699921777 0.0788366069501403 0.7631676470589304 ['VPS45|p.S343T|1|0.11|ENSG00000136631|chr1:150082807-150082807|G/C|missense_variant'] 96686 23765 SALALSLLLV True PC9_epitope_Rep3 998.6375828603 998.63648993586 96.696 2 -0.3012593935673171 0.07886548803079081 0.7632066140093515 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000563753.1_1_15:73884305-73925556:-|nuORF', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF', 'nc|ENSG00000156642|Q9Y639-4|NPTN'] 87589 13131 QQLQNQIRL True PC9_epitope_Rep1 1139.6411051009497 1139.64000993586 55.376 2 -0.3013226025083653 0.07886548803079081 0.7632710544242858 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD'] 139612 18779 YLYLQANLI True PC9_epitope_Rep4 1109.6120963884498 1109.61098993586 80.317 2 -0.3013700793626424 0.07886548803079081 0.7633194580638901 ['ENSG00000225968|ENST00000424383|ELFN1'] 122425 8639 VGDVFRGG True PC9_epitope_Rep2 805.4082516318099 805.40714993586 38.595 2 -0.3014001047964404 0.07886548803079081 0.7633500704312651 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 96459 13478 SAAMPGASL True PC9_epitope_Rep1 803.38473930591 803.3841949679301 56.7 1 -0.30140095820184865 0.07886548803079081 0.7633509405282211 ['ENSG00000086062|ENST00000379731|B4GALT1'] 79408 8619 PATGFSFST True PC9_epitope_Rep4 913.41814760917 913.41704993586 40.635 2 -0.3015168372969743 0.07888205460235244 0.7634690909031454 ['ENSG00000213024|ENST00000352066|NUP62', 'NUP62|p.I92Sfs*8|1|0.23|ENSG00000213024|chr19:49909535-49909535|C/-|frameshift_variant'] 109998 9981 TEILSLEKP True H1975_Epitope_Rep3 1028.57537652656 1028.57426993586 43.428 2 -0.3015522765811613 0.07889862057802637 0.7635052267534796 ['nc|ENSG00000196290|Q9GZT8-2|NIF3L1', 'ENSG00000196290|ENST00000409020|NIF3L1'] 59351 15176 LFKRFWWRHYQ True NCI_RA007_Epitope_Rep1 1665.8680853440098 1665.8669899358601 63.102 2 -0.3015646966717744 0.07891518595784476 0.7635178911817639 ['ENST00000354179.8_2_5:176671236-176673694:+|nuORF'] 18445 7077 EIYPEWNPD True H1975_Epitope_Rep1 1161.49785448185 1161.4967499358602 32.248 2 -0.3016353022971531 0.07894973473608488 0.7635898879916991 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3'] 27747 8803 FPSAAATAA True PC9_epitope_Rep6 805.39701824177 805.39592993586 43.764 2 -0.3017276603908405 0.07896345849518055 0.7636840715445165 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 83712 11344 PVGEGLGSL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 51.411 2 -0.3017453959138391 0.07896345849518055 0.7637021583578583 ['ENSG00000135631|ENST00000486777|RAB11FIP5'] 118846 9035 VAARDQLSV True PC9_epitope_Rep3 957.52434401321 957.52324993586 39.695 2 -0.30176266784257494 0.07896345849518055 0.7637197726284333 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 125893 16978 VLATGSGIVI True PC9_epitope_Rep5 928.5593325395998 928.55822993586 70.324 2 -0.30185922329588444 0.0790325481028592 0.7638182461794661 ['nc|ENSG00000167695|Q8TBR7-1|TLCD3A', 'ENST00000570699.1_1_17:636236-644807:+|nuORF', 'ENSG00000167695|ENST00000308278|TLCD3A'] 74397 13131 NESGELVAI True PC9_epitope_Rep4 930.4658260775799 930.46472993586 58.404 2 -0.30191354441113266 0.0790325481028592 0.763873649648857 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 109535 14149 TDRMTENMATV True PC9_epitope_Rep1 1267.55367218915 1267.5520349037902 59.247 3 -0.3019772898176783 0.07904768754944975 0.7639386682286411 ['TNN|p.V719M|1|0.15|ENSG00000120332|chr1:175116974-175116974|G/A|missense_variant'] 116576 15226 TTYEGSITV True PC9_epitope_Rep5 969.46549172441 969.46494496793 63.575 1 -0.3020651303479181 0.07904768754944975 0.7640282686452975 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.W2883Lfs*11|1|0.24|ENSG00000181143|chr19:8972491-8972492|-/A|frameshift_variant', 'MUC16|p.T2979Lfs*26|1|0.59|ENSG00000181143|chr19:8972205-8972205|G/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 123363 19678 VGMEESQAVP True PC9_epitope_Rep2 1045.4750108622898 1045.47390993586 81.078 2 -0.3021356903885286 0.07906424756801467 0.7641002470272277 ['SSH3|p.A521V|1|0.18|ENSG00000172830|chr11:67310218-67310218|C/T|missense_variant'] 57087 15080 LDSLSDENETL True PC9_epitope_Rep6 1234.55649155678 1234.5553899358601 70.061 2 -0.3021585059546428 0.07908080699104542 0.7641235221163061 ['ARMC7|p.E68D|1|0.43|ENSG00000125449|chr17:75110575-75110575|G/T|missense_variant'] 101742 8067 SLNKNNSAI True PC9_epitope_Rep6 959.5036085686299 959.50250993586 40.526 2 -0.3022362221557135 0.07912621359223301 0.7642028069356764 ['nc|ENSG00000157087|Q01814-6|ATP2B2', 'nc|ENSG00000157087|Q01814-8|ATP2B2', 'nc|ENSG00000157087|Q01814-5|ATP2B2', 'ENSG00000157087|ENST00000360273|ATP2B2', 'ENST00000468426.1_1_3:10370500-10373830:-|nuORF', 'ENST00000467702.2_1_3:10370500-10373681:-|nuORF'] 128158 11014 VPLPRNFPRVP True H1975_Epitope_Rep1 1290.75607528354 1290.7549699358601 47.326 2 -0.3022541119833114 0.07912621359223301 0.7642210585912845 ['ENST00000321037.4_1_6:46097759-46107324:+|nuORF'] 91621 21720 RIPDIVLWPT True PC9_epitope_Rep1 1208.6917436914798 1208.6906499358602 88.379 2 -0.30229020527930905 0.07912621359223301 0.7642578827393396 ['ENSG00000018510|ENST00000264167|AGPS', 'ENST00000460342.1_1_2:178301730-178305781:+|nuORF'] 11953 4265 DHNDGLGNAF True NCI_RA007_Epitope_Rep4 1058.44173658806 1058.4406299358602 22.736 2 -0.3022906272093216 0.07912621359223301 0.764258313219769 ['ENSG00000271447|ENST00000605424|MMP28'] 30930 4330 GARAQLREATT True NCI_RA007_Epitope_Rep4 1172.6261833127996 1172.6245349037902 23.0 3 -0.30233538724742015 0.07912621359223301 0.7643039812144697 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3', 'ENST00000593331.1_1_19:8399202-8399642:-|nuORF'] 7699 5999 ASLVGVGLPPP True NCI_RA007_Epitope_Rep3 1005.5858816406098 1005.58478993586 30.574 2 -0.3023582617304618 0.07912621359223301 0.7643273203932841 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000590400.1_1_19:11303345-11305238:-|nuORF'] 85100 8050 QELARVRQREK True NCI_RA007_Epitope_Rep2 1411.8007936298297 1411.79914490379 35.944 3 -0.3023831543200585 0.07914276981715539 0.7643527192083701 ['ENSG00000143847|ENST00000295706|PPFIA4'] 125524 21199 VKEYTMIIL True PC9_epitope_Rep3 1108.620218544 1108.6191299358602 86.832 2 -0.3024954697799628 0.07915932544676567 0.7644673257332621 ['ENSG00000174937|ENST00000641993|OR5M3'] 87502 12484 QQGPVGVNV True PC9_epitope_Rep1 896.4715801643599 896.4710349679301 52.888 1 -0.3025381111501674 0.07917303370786517 0.764510839951803 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.T950P|1|0.48|ENSG00000196924|chrX:154361766-154361766|T/G|missense_variant'] 69298 15529 LTTTRRAV True PC9_epitope_Rep6 916.5454138109599 916.54430993586 71.91 2 -0.3025637788702425 0.07917303370786517 0.764537033891932 ['nc|ENSG00000120594|Q6UX71-2|PLXDC2', 'ENSG00000120594|ENST00000377252|PLXDC2', 'nc|ENSG00000120594|Q6UX71-3|PLXDC2', 'ENST00000377238.2_1_10:20332341-20568745:+|nuORF'] 107177 19479 SVILASVSV True PC9_epitope_Rep3 873.51713337445 873.51602993586 80.155 2 -0.30256806879522263 0.07917303370786517 0.7645414118256711 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 126230 14915 VLGPPVIV True H1975_Epitope_Rep3 792.5109257952 792.51037496793 62.757 1 -0.30264265361889214 0.0791895876029195 0.7646175295394363 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'IGSF9|p.R978Gfs*9|1|0.16|ENSG00000085552|chr1:159928456-159928456|T/-|frameshift_variant', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 113158 14646 TLPPPHADSL True PC9_epitope_Rep4 1046.5396597241802 1046.53856993586 64.265 2 -0.30269358864918755 0.07920044579461091 0.7646695144352844 ['ENST00000459905.5_1_9:139835382-139837220:-|nuORF'] 121360 9533 VEVLFNELE True NCI_RA007_Epitope_Rep1 1090.55464108198 1090.55354993586 41.078 2 -0.3026937509923168 0.07920044579461091 0.764669680128577 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 98581 7026 SFRSFQRS True H1975_Epitope_Rep3 1013.50427727497 1013.50318993586 31.988 2 -0.3027059216274287 0.07920044579461091 0.7646821019928361 ['ENST00000530743.1_1_X:74520797-74523284:+|nuORF'] 142424 17687 YYFDHNSNW True PC9_epitope_Rep5 1244.48868678048 1244.4875899358601 73.047 2 -0.30274474046719124 0.07920044579461091 0.7647217230950228 ['ENSG00000100147|ENST00000255784|CCDC134'] 41594 14322 IADEGTWTL True NCI_RA007_Epitope_Rep4 1004.48147614172 1004.48036993586 62.395 2 -0.3027813916408339 0.07920044579461091 0.7647591330744113 ['ENSG00000170584|ENST00000302764|NUDCD2'] 133449 14426 VVYGGGAAEI True PC9_epitope_Rep2 934.4759968384599 934.47488993586 60.759 2 -0.30280228729451963 0.07921699741156168 0.764780461927481 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 68452 17880 LTFAAERFCRL True PC9_epitope_Rep1 1325.69142642165 1325.68978490379 73.568 3 -0.3028693665756121 0.07923212424057231 0.7648489347725721 ['ENST00000578562.6_1_18:3252236-3252314:+|nuORF'] 69266 19487 LTTILKAWDF True PC9_epitope_Rep2 1206.6648602373 1206.66376993586 80.339 2 -0.3028696031370337 0.07923212424057231 0.7648491762564172 ['ENST00000569461.1_1_16:81045544-81053727:+|nuORF', 'nc|ENSG00000166451|Q96H22-2|CENPN', 'nc|ENSG00000166451|Q96H22-5|CENPN', 'nc|ENSG00000166451|Q96H22-4|CENPN', 'ENSG00000166451|ENST00000305850|CENPN', 'nc|ENSG00000166451|Q96H22-3|CENPN'] 106049 8635 STAAKIMGV True PC9_epitope_Rep6 876.4738886634799 876.47278993586 43.032 2 -0.30287412860614993 0.07924155283968368 0.7648537959032451 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 101904 19069 SLPSWSCSLSI True PC9_epitope_Rep5 1178.56416021986 1178.56306993586 78.378 2 -0.3029435847241138 0.07924155283968368 0.7649247000146029 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 66062 14653 LSEHNVLV True PC9_epitope_Rep3 909.4919812557699 909.49088993586 61.497 2 -0.30295349541937344 0.07924155283968368 0.7649348177196783 ['ZBTB5|p.A642Vfs*11|1|0.39|ENSG00000168795|chr9:37440627-37440628|-/CTTA|frameshift_variant', 'ENSG00000168795|ENST00000307750|ZBTB5'] 8702 9301 AVAPPGVAA True PC9_epitope_Rep4 751.42283906679 751.42174993586 43.384 2 -0.30296029466947094 0.07924155283968368 0.7649417590466914 ['ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2', 'WNK2|p.R1578Gfs*48|1|0.19|ENSG00000165238|chr9:93289369-93289369|C/-|frameshift_variant'] 83917 7510 PVQDTPVA True NCI_RA007_Epitope_Rep4 825.4232329896099 825.42212993586 35.533 2 -0.30297547005391384 0.07924155283968368 0.7649572517045008 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 11368 10416 DEQREKLVL True PC9_epitope_Rep1 1128.6138872935999 1128.61225490379 44.949 3 -0.3029917358920471 0.07924155283968368 0.7649738578740729 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 114907 6003 TQSNNTFSL True PC9_epitope_Rep2 1010.46688870674 1010.46578993586 28.479 2 -0.30305996453486633 0.07927037469673825 0.7650435170182437 ['GLI3|p.C818F|1|0.17|ENSG00000106571|chr7:41966620-41966620|C/A|missense_variant'] 45773 17482 ISAPPSVCSDP True PC9_epitope_Rep1 1071.49066092643 1071.4895699358601 72.04 2 -0.30315223393231816 0.07927037469673825 0.7651377286214002 ['nc|ENSG00000125386|P78312-3|FAM193A', 'nc|ENSG00000125386|P78312-4|FAM193A', 'nc|ENSG00000125386|P78312-6|FAM193A', 'nc|ENSG00000125386|P78312-2|FAM193A', 'nc|ENSG00000125386|P78312-5|FAM193A', 'nc|ENSG00000125386|P78312|FAM193A', 'ENSG00000125386|ENST00000637812|FAM193A'] 86138 12253 QIDGDFEDY True H1975_Epitope_Rep2 1100.42983449168 1100.42927496793 52.213 1 -0.3032211625929218 0.07927037469673825 0.7652081140121211 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 89532 11749 QYLPHVARL True PC9_epitope_Rep2 1095.61891310439 1095.6178099358601 50.526 2 -0.30326812170129513 0.07927037469673825 0.7652560684416474 ['ENSG00000148248|ENST00000371989|SURF4', 'ENST00000467910.5_1_9:136231851-136242840:-|nuORF', 'nc|ENSG00000148248|O15260-3|SURF4', 'nc|ENSG00000148248|O15260-2|SURF4'] 94646 10418 RRWLTRRRWCW True H1975_Epitope_Rep1 1673.89498588153 1673.89333490379 45.024 3 -0.3032877846408056 0.07927037469673825 0.7652761488489648 ['BCL11B|p.G581Afs*24|1|0.29|ENSG00000127152|chr14:99175094-99175094|C/-|frameshift_variant'] 90372 6287 REHGIRLLEA True NCI_RA007_Epitope_Rep1 1192.66765420196 1192.66600490379 28.485 3 -0.30333048348784875 0.07928692089278655 0.7653197556807956 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 119562 18578 VATDFFTVL True NCI_RA007_Epitope_Rep3 1011.5276980581499 1011.52717496793 81.284 1 -0.3033322885681523 0.07930204140310523 0.765321599189393 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 112528 23185 TLDWEIVEL True PC9_epitope_Rep1 1116.5702911461199 1116.56977496793 93.976 1 -0.30334859488360666 0.07930204140310523 0.7653382528100463 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1'] 119410 11729 VAQKQREREER True PC9_epitope_Rep3 1427.7593227406699 1427.75767490379 50.135 3 -0.3035029851693932 0.07935452568779314 0.7654959459068793 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000532904.5_1_11:62445243-62446247:-|nuORF', 'ENST00000533908.5_1_11:62445382-62446470:-|nuORF', 'ENST00000525717.5_1_11:62445243-62446470:-|nuORF', 'ENST00000524762.5_1_11:62445008-62446470:-|nuORF', 'nc|ENSG00000162191|Q04323-2|UBXN1'] 59031 15782 LEVQFQIDP True PC9_epitope_Rep3 1087.5549754351498 1087.5538699358601 65.863 2 -0.30363459776967655 0.07938903863432166 0.7656303951027864 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant'] 94490 16484 RRRRRRRRRA True NCI_RA007_Epitope_Rep5 1493.9576776808099 1493.9560349037902 70.164 3 -0.30370067189172434 0.07940558121147868 0.7656979007542912 ['ENST00000253008.2_1_9:133556683-133557598:+|nuORF'] 102530 9852 SLVRAFYCERR True NCI_RA007_Epitope_Rep2 1398.7190381518196 1398.7179499358601 42.947 2 -0.3037081708204743 0.07945663306560294 0.7657055624699588 ['ENSG00000198286|ENST00000396946|CARD11'] 501 2633 AAPAAPAAGE True PC9_epitope_Rep2 824.4028318981999 824.40172993586 14.777 2 -0.30371885571993135 0.07945663306560294 0.7657164794302721 ['ENSG00000101115|ENST00000217086|SALL4', 'nc|ENSG00000101115|Q9UJQ4-2|SALL4'] 65902 9402 LSDPLTTVP True H1975_Epitope_Rep1 941.5069626135701 941.50586993586 41.077 2 -0.303729109663744 0.07947317353649333 0.7657269562000636 ['ENST00000583038.5_1_17:37872360-37881463:+|nuORF', 'ENST00000582788.5_1_17:37872360-37873734:+|nuORF'] 27381 13068 FLVGSATP True H1975_Epitope_Rep1 790.42250471362 790.4219549679301 55.354 1 -0.3038543010083337 0.07952564908813224 0.765854877990992 ['ENSG00000131471|ENST00000308423|AOC3', 'nc|ENSG00000131471|Q16853-2|AOC3', 'nc|ENSG00000131471|Q16853-3|AOC3'] 126101 13877 VLEPTAELAA True PC9_epitope_Rep5 1012.5440763982798 1012.54296993586 58.398 2 -0.30397425149635293 0.07953361359634939 0.7659774621127755 ['nc|ENSG00000197558|A2VEC9-2|SSPOP', 'nc|ENSG00000197558|A2VEC9|SSPOP'] 79915 6635 PEQPPRPEP True PC9_epitope_Rep3 1045.5192586327698 1045.5181699358602 30.544 2 -0.30397759581262135 0.07953361359634939 0.7659808801055424 ['ENSG00000198624|ENST00000355417|CCDC69'] 113022 22470 TLMTFSIIEL True PC9_epitope_Rep5 1166.62569784726 1166.62460993586 91.433 2 -0.3039855837657879 0.07953361359634939 0.7659890440911937 ['ENSG00000166930|ENST00000300190|MS4A5'] 63493 15889 LLWYFQRLRLP True PC9_epitope_Rep1 1503.8714393889497 1503.86980490379 65.927 3 -0.3040250056857188 0.07953361359634939 0.7660293359000332 ['ENSG00000198837|ENST00000361217|DENND4B', 'ENST00000492898.1_1_1:153903201-153905153:-|nuORF'] 126778 17950 VLPKLYVKL True PC9_epitope_Rep3 1071.7056028504699 1071.7045099358602 74.25 2 -0.3040351998923684 0.07953361359634939 0.7660397553623342 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000471178.2_1_19:35024355-35024547:-|nuORF', 'ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 68569 15373 LTGTWTSV True PC9_epitope_Rep2 863.43888305375 863.43778993586 64.415 2 -0.3040432056402948 0.07953361359634939 0.7660479380980729 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 68806 17854 LTLPSHRMP True PC9_epitope_Rep1 1050.56443500338 1050.56332993586 73.47 2 -0.30409965798077765 0.07953361359634939 0.7661056407031215 ['ENST00000299613.10_1_11:9596239-9596734:+|nuORF'] 121459 12283 VEYDMDEEDY True H1975_Epitope_Rep2 1306.45472891018 1306.4536299358601 52.33 2 -0.3041444630965361 0.07956668582926128 0.7661514409376252 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 110439 22207 TFAELSLGL True PC9_epitope_Rep2 949.5120479940099 949.51094993586 90.902 2 -0.30417000074069767 0.07956668582926128 0.7661775468907163 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 67253 7292 LSRPTEGVQA True H1975_Epitope_Rep3 1056.55637241748 1056.55526993586 33.023 2 -0.3042064503486474 0.07958322105452259 0.7662148090559917 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 18108 15347 EIIDRMPVI True NCI_RA007_Epitope_Rep1 1084.59506642532 1084.59396993586 63.774 2 -0.3042626295422565 0.07961199928148015 0.7662722439128581 ['ENSG00000133739|ENST00000360375|LRRCC1', 'nc|ENSG00000133739|Q9C099-2|LRRCC1'] 91846 19902 RKKKLKKKKTL True PC9_epitope_Rep4 1397.9922232279696 1397.99056490379 84.688 3 -0.30428212706114477 0.07961199928148015 0.7662921781575185 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 36828 7923 GVLGAVEG True PC9_epitope_Rep3 700.3755545212 700.3750049679301 35.455 1 -0.3042920569948326 0.07961199928148015 0.766302330698418 ['XKR6|p.G192V|1|0.24|ENSG00000171044|chr8:11200765-11200765|C/A|missense_variant'] 48285 10324 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65880490379 47.401 3 -0.30430121623482476 0.07961199928148015 0.7663116953800012 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 110892 7093 TGTFNCSSDP True H1975_Epitope_Rep2 1027.3916751611498 1027.3905699358602 32.215 2 -0.3043482718692998 0.07961199928148015 0.7663598081662282 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant', 'ENST00000463333.6_1_2:86831591-86842310:-|nuORF'] 43475 13584 IGINRYEL True PC9_epitope_Rep1 976.53418042092 976.53308993586 57.107 2 -0.3044041591786911 0.07966667863941669 0.7664169547470112 ['ENSG00000177706|ENST00000313766|FAM20C'] 90374 7233 REHGIRLLEA True NCI_RA007_Epitope_Rep4 1192.66765420196 1192.66600490379 34.456 3 -0.3045253690457277 0.07966667863941669 0.7665409097467719 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 13114 15090 DLQRVPRNYDP True H1975_Epitope_Rep2 1371.68951184535 1371.6884099358601 63.196 2 -0.30457513746601095 0.07966667863941669 0.7665918109211365 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000561147.1_1_15:51236911-51236971:+|nuORF', 'nc|ENSG00000164934|Q9NV06-2|DCAF13', 'ENST00000521716.1_1_8:104427674-104432721:+|nuORF'] 48267 8278 IYQRDPLKL True NCI_RA007_Epitope_Rep4 1144.6604435631998 1144.65880490379 38.65 3 -0.3046175170426384 0.07966667863941669 0.7666351576805779 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 28393 13379 FRYMRIYRRYI True NCI_RA007_Epitope_Rep2 1635.8820211559898 1635.8809299358602 56.681 2 -0.30464369642573685 0.07966667863941669 0.766661935730321 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 99153 13613 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.4914349679301 57.385 1 -0.3046461558673361 0.07966667863941669 0.7666644514614855 ['ENSG00000132646|ENST00000379143|PCNA'] 56203 19299 LAYVAENGT True PC9_epitope_Rep2 936.4552613938799 936.45416993586 79.608 2 -0.30465768877902916 0.07966667863941669 0.7666762484372258 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 107791 5871 SVTGAITVAK True NCI_RA007_Epitope_Rep1 945.5494961318899 945.54838993586 26.889 2 -0.304671515620701 0.07966667863941669 0.7666903921027318 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 135170 20510 WENLYQQTL True PC9_epitope_Rep4 1193.57168812845 1193.57117496793 87.041 1 -0.3046894212586329 0.07966667863941669 0.7667087084090574 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 33348 12107 GKSLFSQSL True PC9_epitope_Rep3 965.51819600361 965.51708993586 51.612 2 -0.30472826544010173 0.07966667863941669 0.7667484449836678 ['ENST00000494985.5_1_13:113863983-113873323:+|nuORF'] 14695 4953 DVKADNLSSD True NCI_RA007_Epitope_Rep5 1062.4829326937001 1062.48182993586 25.752 2 -0.30474284909328775 0.07966667863941669 0.7667633642074961 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 36925 12190 GVLQQLAPSL True NCI_RA007_Epitope_Rep4 1024.5916952970397 1024.5905899358602 53.883 2 -0.30475466663043554 0.07966667863941669 0.7667754538799898 ['KCNH1|p.V172L|1|0.26|ENSG00000143473|chr1:211082824-211082824|C/A|missense_variant'] 82082 3970 PMLEKEEEAHR True NCI_RA007_Epitope_Rep2 1367.6503494553099 1367.64871490379 20.079 3 -0.3048431104965697 0.07968320672377566 0.7668659405325557 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000398125.5_1_4:2916713-2930247:+|nuORF', 'ENST00000513328.6_1_4:2916713-2930247:+|nuORF'] 72364 18805 MITEASFYL True NCI_RA007_Epitope_Rep5 1073.51033374185 1073.5097749679298 79.176 1 -0.3048594885312202 0.07969400948139635 0.7668826980366352 ['CLCA2|p.A725Sfs*9|1|0.16|ENSG00000137975|chr1:86453386-86453387|GC/-|frameshift_variant', 'ENSG00000137975|ENST00000370565|CLCA2', 'CLCA2|p.D389Tfs*18|1|0.22|ENSG00000137975|chr1:86439068-86439068|G/-|frameshift_variant', 'CLCA2|p.G706Rfs*15|1|0.09|ENSG00000137975|chr1:86450692-86450693|-/A|frameshift_variant'] 76264 6943 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54436993586 32.107 2 -0.30486136559108923 0.07969400948139635 0.7668846186106757 ['ENSG00000174231|ENST00000304992|PRPF8'] 91132 23465 RFVKWPRYIRL True PC9_epitope_Rep2 1532.9092218799997 1532.9081299358602 95.729 2 -0.30489953256118335 0.07969400948139635 0.7669236714352623 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 27694 13893 FPLATYAP True H1975_Epitope_Rep3 878.4538048419 878.4532549679301 58.75 1 -0.30495493752009556 0.07969400948139635 0.7669803659688041 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'TUBA3D|p.I276M|1|0.51|ENSG00000075886|chr2:131480521-131480521|C/G|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C'] 126292 7482 VLIAGGVGINP True H1975_Epitope_Rep3 1008.59678067748 1008.59568993586 33.76 2 -0.30498902739851624 0.07969400948139635 0.7670152514512903 ['ENST00000442255.5_1_3:16313687-16345066:+|nuORF', 'ENSG00000154814|ENST00000285083|OXNAD1'] 130625 8534 VSSRERHRP True PC9_epitope_Rep3 1122.6006372713 1122.59899490379 37.781 3 -0.30502732675910593 0.07972849216182729 0.7670544466217155 ['nc|ENSG00000088305|Q9UBC3-4|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-3|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-5|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-2|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-6|DNMT3B', 'ENSG00000088305|ENST00000328111|DNMT3B'] 73856 14911 NAPVPNSLL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 62.359 2 -0.30514477747512836 0.07978093014903932 0.7671746575407232 ['RLF|p.R452L|1|0.25|ENSG00000117000|chr1:40236057-40236057|G/T|missense_variant'] 66169 10407 LSEQIYEDP True H1975_Epitope_Rep3 1092.49752012868 1092.49642993586 45.088 2 -0.3052931316087089 0.07979602097249155 0.7673265267064755 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 5594 17895 ANILQTSV True PC9_epitope_Rep5 844.46543215476 844.46432993586 73.851 2 -0.3053133054199537 0.07979602097249155 0.7673471810019861 ['ENSG00000140479|ENST00000611716|PCSK6', 'nc|ENSG00000140479|P29122-7|PCSK6'] 93830 2214 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 11.458 3 -0.30539573028973427 0.07982189985457548 0.7674315752818655 ['ZNF14|p.H273Lfs*53|1|0.1|ENSG00000105708|chr19:19712460-19712463|GTGT/-|frameshift_variant', 'ENSG00000105708|ENST00000344099|ZNF14'] 101684 12365 SLMEKHSYP True PC9_epitope_Rep3 1090.51173072418 1090.5106299358602 52.592 2 -0.3054491899547474 0.07982189985457548 0.7674863177106251 ['RGS8|p.D157H|1|0.21|ENSG00000135824|chr1:182646809-182646809|C/G|missense_variant'] 121109 14023 VERKGEVL True PC9_epitope_Rep1 928.5341804209198 928.53308993586 58.779 2 -0.3054725883305814 0.07982189985457548 0.7675102788840731 ['ENSG00000124508|ENST00000356709|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'nc|ENSG00000112763|Q7KYR7-3|BTN2A1', 'ENST00000377600.6_1_6:26463094-26468774:+|nuORF', 'nc|ENSG00000112763|Q7KYR7-5|BTN2A1', 'ENSG00000112763|ENST00000312541|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-1|BTN2A1'] 30154 19236 FYPPHPNYTW True PC9_epitope_Rep5 1320.5927579261997 1320.5916699358602 79.031 2 -0.3054841874698186 0.07982189985457548 0.7675221573224934 ['nc|ENSG00000167123|Q5T4B2-2|CERCAM', 'ENSG00000167123|ENST00000372838|CERCAM', 'CERCAM|p.A230P|1|0.07|ENSG00000167123|chr9:128424536-128424536|G/C|missense_variant', 'ENST00000483893.5_1_9:131186485-131189983:+|nuORF'] 141963 14159 YVIEDDVNM-[Oxidation] True PC9_epitope_Rep5 1112.46959150912 1112.4684899358601 59.474 2 -0.30549882437511605 0.07982189985457548 0.7675371469651563 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 107899 16100 SVVQGTLGV True PC9_epitope_Rep5 858.4810822188999 858.47998993586 66.916 2 -0.30553262419798644 0.07982189985457548 0.7675717625793629 ['ENSG00000163872|ENST00000305135|YEATS2'] 69704 16709 LVEEYVEKVP True PC9_epitope_Rep1 1203.6387050591097 1203.6376099358602 69.099 2 -0.305555249737281 0.07982189985457548 0.7675949351805379 ['ENST00000575090.1_1_17:79781125-79781671:-|nuORF', 'ENSG00000225663|ENST00000455127|MCRIP1', 'ENST00000576679.1_2_17:79781125-79782334:-|nuORF'] 71658 17004 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50939496793 70.829 1 -0.3056325240034728 0.07989228007181329 0.7676740837736057 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 91801 6253 RKIATEKDFL True NCI_RA007_Epitope_Rep4 1219.6924719674698 1219.6908149037902 30.657 3 -0.3056681566120562 0.07990306076653801 0.7677105837706701 ['ENSG00000161057|ENST00000292644|PSMC2', 'PSMC2|p.R400L|1|0.49|ENSG00000161057|chr7:103367951-103367951|G/T|missense_variant', 'nc|ENSG00000161057|P35998-2|PSMC2'] 121769 9137 VFNIKETGLL True NCI_RA007_Epitope_Rep1 1132.6492101731599 1132.64755490379 39.544 3 -0.3056768000613988 0.07990306076653801 0.7677194379201538 ['ENSG00000169989|ENST00000304337|TIGD4', 'TIGD4|p.K208Vfs*45|1|0.44|ENSG00000169989|chr4:152770382-152770383|TT/-|frameshift_variant'] 68265 7936 LTEARALDAP True NCI_RA007_Epitope_Rep3 1055.56112344475 1055.56002993586 38.325 2 -0.30568955061044173 0.07990306076653801 0.767732499499433 ['ENST00000303538.12_1_4:39978230-39979126:-|nuORF'] 6462 12075 APSGNFVAC True PC9_epitope_Rep4 864.37998827864 864.37888993586 54.252 2 -0.3057012047143903 0.07990306076653801 0.7677444381087632 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 56322 7997 LDCAHTAASF True PC9_epitope_Rep3 1034.44913046762 1034.4480299358602 35.738 2 -0.3057137388459905 0.07990306076653801 0.7677572784656136 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 126957 13912 VLRLDSRLWP True PC9_epitope_Rep6 1253.72444080209 1253.72278490379 65.353 3 -0.30578850193683205 0.07993752917100491 0.7678338732235452 ['ENSG00000168209|ENST00000307365|DDIT4'] 48147 18338 IYPPINVLPSL True NCI_RA007_Epitope_Rep3 1224.71181042972 1224.7107099358602 80.309 2 -0.3058422999206424 0.0799468696151637 0.7678889946817593 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 36965 8040 GVMHFFLVLK True NCI_RA007_Epitope_Rep3 1189.6681717959298 1189.6665149037901 38.714 3 -0.3058443700027047 0.0799468696151637 0.7678911157810769 ['ENST00000356628.3_1_9:140195350-140195905:-|nuORF'] 74035 13529 NDKLAEGF True PC9_epitope_Rep3 892.42904664604 892.4279499358599 57.091 2 -0.3058500384573736 0.0799468696151637 0.76789692396985 ['ENSG00000129988|ENST00000217407|LBP'] 43950 18096 IIDQVNPEL True PC9_epitope_Rep5 1039.5549754351498 1039.5538699358601 74.618 2 -0.3058508527259165 0.0799468696151637 0.7678977583152651 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20', 'ENST00000494633.1_1_20:419232-422368:-|nuORF', 'TBC1D20|p.V377Wfs*17|1|0.38|ENSG00000125875|chr20:438663-438670|GTGCCACT/-|frameshift_variant', 'ENSG00000125875|ENST00000354200|TBC1D20', 'nc|ENSG00000125875|Q96BZ9-3|TBC1D20'] 524 2627 AAPKPFSRWR True NCI_RA007_Epitope_Rep4 1214.6672602791398 1214.6656049037902 14.727 3 -0.3058518029397319 0.0799468696151637 0.7678987319591953 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant', 'nc|ENSG00000156222|O00337-2|SLC28A1'] 40591 14671 HRHHYHLRRRR True H1975_Epitope_Rep1 1622.89915974518 1622.8980699358601 61.648 2 -0.3058598842395155 0.0799468696151637 0.7679070125834655 ['FASLG|p.D16Afs*56|1|0.17|ENSG00000117560|chr1:172659248-172659248|A/-|frameshift_variant'] 33549 13354 GLEKQVLGL True PC9_epitope_Rep3 955.5702315764698 955.56912993586 56.4 2 -0.3058690449671432 0.0799633837703947 0.7679163993851458 ['NUTM1|p.A794Qfs*4|1|0.25|ENSG00000184507|chr15:34356471-34356471|G/-|frameshift_variant', 'NUTM1|p.T861Hfs*38|1|0.6|ENSG00000184507|chr15:34356670-34356670|C/-|frameshift_variant', 'nc|ENSG00000184507|Q86Y26|NUTM1', 'nc|ENSG00000184507|Q86Y26-3|NUTM1', 'ENSG00000184507|ENST00000537011|NUTM1'] 42295 8842 IDVSRHSILD True NCI_RA007_Epitope_Rep1 1153.60913626633 1153.60802993586 38.392 2 -0.30587684740409943 0.07997989733280683 0.7679243944807667 ['nc|ENSG00000242498|Q7Z6K5-2|ARPIN', 'ENSG00000242498|ENST00000357484|ARPIN'] 1381 15910 AEEDVYWLSA True H1975_Epitope_Rep2 1181.52406922969 1181.5229699358601 66.398 2 -0.3059361049901107 0.07999641030243201 0.7679851184347853 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF'] 75155 6314 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59746993586 31.347 2 -0.3059692803341588 0.08001005061201048 0.7680191171833216 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 96940 11307 SAVQVLGVP True H1975_Epitope_Rep1 868.5018176634799 868.5012649679301 48.47 1 -0.30598399849099356 0.08001005061201048 0.7680342012091826 ['ENSG00000105641|ENST00000222248|SLC5A5'] 114445 12086 TPVLEVEEA True H1975_Epitope_Rep1 985.49679185269 985.49568993586 51.502 2 -0.30603391389095186 0.08001005061201048 0.768085360032308 ['ENST00000474629.6_1_3:122449243-122449357:+|nuORF'] 120625 13959 VEIDIELAP True PC9_epitope_Rep1 997.5331773614099 997.53208993586 58.529 2 -0.3060588472952817 0.08004450905436207 0.7681109160577468 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 136760 11756 WYQTKFETL True NCI_RA007_Epitope_Rep3 1214.5971746002997 1214.5960699358602 53.352 2 -0.3060750077875321 0.08006101938262743 0.7681274806405693 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 10343 12590 CFSCAQCK True NCI_RA007_Epitope_Rep5 888.32921565908 888.32810993586 55.081 2 -0.3061235486134974 0.08009904720891425 0.7681772377901704 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 59204 21994 LFDWIQSEL True PC9_epitope_Rep1 1149.5706254992901 1149.5695299358601 89.421 2 -0.30612539476795947 0.08009904720891425 0.7681791302813193 ['nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 132333 15913 VTYQQHIP True PC9_epitope_Rep1 984.5028802926399 984.50178993586 66.02 2 -0.3061378447393605 0.08009904720891425 0.7681918928809301 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 125234 18435 VIKGTQASMV True PC9_epitope_Rep5 1032.5637662970398 1032.5626699358602 75.932 2 -0.30613877951854723 0.08009904720891425 0.7681928511433956 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'SDK2|p.P1051Lfs*33|1|0.18|ENSG00000069188|chr17:73398361-73398371|GCGGGCATCGG/-|frameshift_variant', 'SDK2|p.S1083Vfs*66|1|0.28|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 85889 15741 QHFEFEYQT True PC9_epitope_Rep1 1227.5196525555898 1227.5185499358602 65.373 2 -0.30615774000210894 0.08009904720891425 0.7682122882569222 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 16412 12514 EEKGVTLLY True H1975_Epitope_Rep2 1050.5597264624198 1050.5586299358602 53.229 2 -0.3062327405220869 0.08009904720891425 0.7682891799378317 ['nc|ENSG00000111452|Q6QNK2-4|ADGRD1', 'ENSG00000111452|ENST00000261654|ADGRD1', 'ENST00000541937.2_1_12:131451015-131457650:+|nuORF'] 58429 15728 LEPDQEVVT True PC9_epitope_Rep2 1028.50260550912 1028.5015099358602 65.768 2 -0.3062817592652166 0.08009904720891425 0.7683394397108663 ['ENST00000567073.2_1_16:33123771-33127908:-|nuORF'] 40310 6402 HQQSGSELAL True PC9_epitope_Rep4 1068.5199869087598 1068.5188899358602 31.716 2 -0.3062824620986481 0.08009904720891425 0.768340160367089 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A', 'KIF20A|p.R675Q|1|0.1|ENSG00000112984|chr5:138185609-138185609|G/A|missense_variant'] 135821 7575 WNPRRWWRWCW True NCI_RA007_Epitope_Rep2 1730.8153385785 1730.81368490379 34.091 3 -0.30629400164506876 0.08009904720891425 0.7683519926556018 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 130860 6170 VTCKPNSSPP True H1975_Epitope_Rep2 1028.49608066004 1028.49498993586 28.705 2 -0.3063504309339057 0.08009904720891425 0.7684098566470713 ['chr9:135565801-135566534|246|40.41|0.97|5.39|+|2|PAEP,PAEP|1'] 62291 18843 LLFSSCFP True PC9_epitope_Rep3 912.4415259060399 912.44042993586 77.701 2 -0.3063599041193709 0.08009904720891425 0.7684195712029529 ['ENST00000404141.5_1_7:154735714-154735774:-|nuORF'] 95907 17306 RYLDWIKKI True PC9_epitope_Rep4 1233.7233781729299 1233.7217249037901 74.57 3 -0.30639484844296483 0.08012774508396728 0.7684554071709565 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 66885 7002 LSNKHDVVK True NCI_RA007_Epitope_Rep2 1038.5821932425 1038.58108993586 31.857 2 -0.3064182751903507 0.08012774508396728 0.7684794328131013 ['ENSG00000174405|ENST00000442234|LIG4'] 3961 6506 AHDQFKSTL True PC9_epitope_Rep5 1045.51925863277 1045.5181699358602 29.998 2 -0.30643298457831336 0.08012774508396728 0.7684945187061474 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 126229 15055 VLGPPVIV True H1975_Epitope_Rep2 792.5109257952 792.51037496793 63.061 1 -0.3064395523224372 0.08012774508396728 0.7685012546759846 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'IGSF9|p.R978Gfs*9|1|0.16|ENSG00000085552|chr1:159928456-159928456|T/-|frameshift_variant', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 114073 11429 TPFEKGLHVV True PC9_epitope_Rep4 1125.61824439805 1125.6166049037902 51.729 3 -0.3064514119306962 0.08012774508396728 0.7685134182370781 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 137540 6762 YEELAEQNR True H1975_Epitope_Rep3 1150.5254662120199 1150.52436993586 30.965 2 -0.3065120782698887 0.08016219028652422 0.7685756430712634 ['ENSG00000167916|ENST00000264651|KRT24', 'CON__Q2M2I5'] 9355 16465 AVSAATFSL True PC9_epitope_Rep2 865.45453311789 865.4539849679301 68.574 1 -0.3067815732540078 0.08022963760315752 0.7688521357033107 ['ENSG00000183354|ENST00000399933|KIAA2026', 'ENST00000540714.1_1_9:5919686-5933837:-|nuORF'] 2018 15000 AEKEAMCLSAP True H1975_Epitope_Rep2 1148.5205811557198 1148.51948993586 62.849 2 -0.30678533748312714 0.08022963760315752 0.7688559985380623 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 119426 14761 VAQLKQLQAET True PC9_epitope_Rep5 1227.6823012065897 1227.6812099358601 61.777 2 -0.30680152671829103 0.08022963760315752 0.768872612129942 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 119731 6044 VAWPRDRRK True PC9_epitope_Rep1 1182.67340828874 1182.67177490379 28.061 3 -0.30687387351448286 0.08026263858490905 0.7689468607127972 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 59584 11421 LFVGLAVGTL True NCI_RA007_Epitope_Rep3 988.5957180483199 988.59462993586 52.05 2 -0.3069101454953372 0.08026263858490905 0.7689840895134067 ['nc|ENSG00000148482|Q504Y0-5|SLC39A12', 'nc|ENSG00000148482|Q504Y0-3|SLC39A12', 'nc|ENSG00000148482|Q504Y0-4|SLC39A12', 'ENSG00000148482|ENST00000377369|SLC39A12'] 47728 16971 IYDPNLAFLRF True NCI_RA007_Epitope_Rep3 1367.7237720957498 1367.7221249037902 74.619 3 -0.3070749003681339 0.08033151549942595 0.7691532186038885 ['ENSG00000197943|ENST00000564138|PLCG2'] 17522 4277 EHFRRSLGK True NCI_RA007_Epitope_Rep2 1128.6152247062798 1128.61357490379 21.276 3 -0.307075079619785 0.08033151549942595 0.769153402639838 ['nc|ENSG00000144560|Q14135-5|VGLL4', 'nc|ENSG00000144560|Q14135-6|VGLL4', 'nc|ENSG00000144560|Q14135-2|VGLL4', 'nc|ENSG00000144560|Q14135|VGLL4', 'nc|ENSG00000144560|Q14135-4|VGLL4', 'ENSG00000144560|ENST00000430365|VGLL4'] 3614 16159 AGPEELGLQV True PC9_epitope_Rep3 1011.5236753068699 1011.52256993586 67.301 2 -0.30720010441305284 0.08041544091267848 0.7692817777883191 ['ENSG00000146700|ENST00000275560|SSC4D'] 48930 12949 KEEEERESRWW True H1975_Epitope_Rep2 1562.7113694887398 1562.70973490379 54.923 3 -0.3072178136675251 0.08041544091267848 0.7692999637740585 ['ENST00000480003.5_1_1:207958419-207966884:+|nuORF'] 16743 6595 EESQRYYWRPK True H1975_Epitope_Rep1 1540.7422756941999 1540.7406449037899 30.428 3 -0.30724923114785013 0.08041544091267848 0.7693322283360767 ['nc|ENSG00000150776|Q6ZUT1-3|NKAPD1', 'nc|ENSG00000150776|Q6ZUT1|NKAPD1', 'ENSG00000150776|ENST00000393047|NKAPD1', 'ENST00000530104.2_1_11:111946298-111951307:+|nuORF'] 139704 7375 YNLKPQTSEK True NCI_RA007_Epitope_Rep2 1206.6244519773002 1206.62334993586 33.311 2 -0.30728467742410726 0.08041544091267848 0.7693686323581157 ['ENSG00000180251|ENST00000295269|SLC9A4'] 13304 19676 DLTPNQEYL True PC9_epitope_Rep3 1091.51350454599 1091.5124099358602 80.916 2 -0.3074206887250772 0.08048430493273542 0.7695083387575704 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209'] 99872 16847 SILPREEAP True PC9_epitope_Rep3 1010.5396597241798 1010.53856993586 69.954 2 -0.30744383724414964 0.08048430493273542 0.7695321193535252 ['ENST00000216133.9_1_22:39529304-39529448:-|nuORF'] 54115 11662 KVLRKLLKKGP True PC9_epitope_Rep3 1278.8863611770998 1278.8847149037902 49.877 3 -0.3074820750908786 0.08050079819196068 0.7695714033318417 ['GPR75-ASB3|p.R34Pfs*7|1|0.43|ENSG00000115239|chr2:53765477-53765478|-/T|frameshift_variant'] 138103 14537 YGGPVGAGI True PC9_epitope_Rep3 789.4021036222099 789.4015549679301 61.037 1 -0.3075577327588071 0.08050862656479787 0.7696491383726445 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'KRT7|p.L76Cfs*122|1|0.17|ENSG00000135480|chr12:52233521-52233521|G/-|frameshift_variant'] 70301 17279 LVSDSALYF True H1975_Epitope_Rep2 1013.50696261357 1013.50586993586 71.754 2 -0.307682848097756 0.08050862656479787 0.7697777109752967 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 124648 5008 VGWSSRRNLDT True NCI_RA007_Epitope_Rep3 1289.6476470333698 1289.64601490379 26.696 3 -0.3076871146825191 0.08050862656479787 0.7697820959396775 ['ENST00000490021.2_1_1:110230443-110251195:+|nuORF'] 67590 19033 LSVAVGSIVDL True PC9_epitope_Rep2 1071.61757569171 1071.61646993586 78.575 2 -0.3077149669596424 0.08050862656479787 0.7698107217832599 ['nc|ENSG00000008083|Q92833-2|JARID2'] 56519 23489 LDFRFRYP True PC9_epitope_Rep1 1112.5767139392399 1112.57560993586 95.137 2 -0.30773443210550944 0.08050862656479787 0.7698307283599544 ['ENSG00000167619|ENST00000301204|TMEM145'] 55527 20287 LAGPAELL True PC9_epitope_Rep3 782.4538048418999 782.4532549679301 83.285 1 -0.30774644600032547 0.08050862656479787 0.769843076758 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 29088 17851 FTIIGQVASV True PC9_epitope_Rep4 1033.5807962601698 1033.5796899358602 76.701 2 -0.30774919259293765 0.08050862656479787 0.7698458998596713 ['ENSG00000198727|ENST00000361789|MT-CYB'] 77858 21143 NVELILDIA True PC9_epitope_Rep4 998.5648118428599 998.56370993586 89.489 2 -0.30781153867236394 0.08052367288378766 0.7699099862182925 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant'] 24521 20807 FAFPGSTNSL True PC9_epitope_Rep5 1039.49746055903 1039.49636993586 85.083 2 -0.30781991836067246 0.08052367288378766 0.7699186003320904 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 62205 13494 LLERNAEAI True PC9_epitope_Rep1 1027.5662088251897 1027.5651099358602 56.761 2 -0.30794157550728757 0.08055809616039884 0.7700436748479385 ['ENSG00000112159|ENST00000369393|MDN1'] 77857 21837 NVELILDIA True PC9_epitope_Rep2 998.5648118428599 998.56370993586 89.471 2 -0.3079557916427143 0.08057458484272444 0.7700582920243861 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant'] 74439 10120 NETYKKRQLFR True NCI_RA007_Epitope_Rep1 1481.8102956843697 1481.80918993586 43.375 2 -0.30799707525297765 0.08058962771680654 0.7701007422866639 ['nc|ENSG00000172995|Q9UBL0|ARPP21', 'ARPP21|p.Q739Sfs*41|1|0.27|ENSG00000172995|chr3:35793731-35793731|C/-|frameshift_variant', 'ENSG00000172995|ENST00000684406|ARPP21', 'nc|ENSG00000172995|Q9UBL0-3|ARPP21'] 111687 16536 TIETYKNIESY True H1975_Epitope_Rep3 1359.6558116752299 1359.6547099358602 69.102 2 -0.30802148945075636 0.08058962771680654 0.7701258478389584 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'LRP12|p.D244*|1|0.14|ENSG00000147650|chr8:104497822-104497823|-/A|frameshift_variant'] 38664 21575 HFRRGRRRSLA True NCI_RA007_Epitope_Rep5 1410.8181154598199 1410.8170099358601 90.075 2 -0.30812312549781057 0.08062260158519528 0.7702303733773825 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 2215 8600 AEMPADSGYPA True H1975_Epitope_Rep2 1107.45427541771 1107.45377496793 38.034 1 -0.30812639564036143 0.08062260158519528 0.7702337367949246 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 130849 11256 VTAWEWVGP True PC9_epitope_Rep6 1043.50763131991 1043.50652993586 54.305 2 -0.30816002300659484 0.08063908763247081 0.7702683244289736 ['ENST00000477478.6_2_17:19247025-19261261:-|nuORF'] 66285 10745 LSFLFQLSF True PC9_epitope_Rep3 1100.5906326678798 1100.5895299358601 46.284 2 -0.30832998264708 0.08065268065268065 0.7704431684207801 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4', 'nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF'] 58680 21400 LERLRDSI True PC9_epitope_Rep2 1000.5665431783599 1000.56544993586 87.787 2 -0.30833963887292787 0.08065268065268065 0.7704531037064681 ['PIK3AP1|p.K651E|1|0.19|ENSG00000155629|chr10:96616702-96616702|T/C|missense_variant'] 938 16222 ADPSLISWDEP True H1975_Epitope_Rep2 1228.5611830143998 1228.56008993586 67.608 2 -0.3083647522737975 0.08065268065268065 0.7704789436570642 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 62584 8365 LLKSWSWTL True NCI_RA007_Epitope_Rep3 1132.62808080576 1132.6269899358601 40.006 2 -0.3084386764684296 0.08070213185591595 0.770555013131779 ['ENST00000539653.5_1_12:65932484-65963821:-|nuORF'] 62941 22247 LLPEHFLFL True PC9_epitope_Rep2 1127.63791721347 1127.63682993586 91.05 2 -0.30850315227823166 0.08070213185591595 0.7706213680878818 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 44590 22441 ILQFQFAEV True PC9_epitope_Rep1 1093.5807962601698 1093.5796899358602 91.141 2 -0.3085119284518191 0.08070213185591595 0.7706304006245738 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1'] 58034 14598 LEHYMLVL True PC9_epitope_Rep2 1016.5364889200399 1016.5353899358599 61.42 2 -0.3086110985036549 0.08071427290818796 0.7707324772671363 ['nc|ENSG00000100376|Q9NWS6-2|FAM118A', 'ENSG00000100376|ENST00000441876|FAM118A'] 82481 5970 PPQTQTPQP True H1975_Epitope_Rep2 992.4927095317598 992.49160993586 27.943 2 -0.30863923867103926 0.08071427290818796 0.7707614454539967 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 132408 16577 VVAGVANALA True PC9_epitope_Rep3 883.5127167003499 883.51160993586 68.902 2 -0.30867816886183336 0.08071427290818796 0.7708015235362816 ['ENSG00000244734|ENST00000335295|HBB', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070'] 45646 24117 IRDYKRRF True NCI_RA007_Epitope_Rep2 1152.651610215 1152.64996490379 101.31 3 -0.3086845746901724 0.08071427290818796 0.7708081185108889 ['ENSG00000206181|ENST00000332567|ELOA2'] 1769 4714 AEGTPDQCLP True H1975_Epitope_Rep2 1029.44371073401 1029.4426099358602 23.223 2 -0.308770355019937 0.08072207084468665 0.7708964389146762 ['ENST00000595601.1_1_19:17651040-17654446:+|nuORF'] 98554 7794 SFPVADPPP True H1975_Epitope_Rep2 925.4545331178899 925.45342993586 34.927 2 -0.3087789868800251 0.08072207084468665 0.7709053271211068 ['ENST00000532671.1_1_11:64892850-64893341:+|nuORF'] 30659 13159 GALAAAATTP True PC9_epitope_Rep1 842.44978209062 842.44868993586 55.48 2 -0.30877985097902566 0.08072207084468665 0.7709062168893664 ['ENSG00000147454|ENST00000519973|SLC25A37', 'nc|ENSG00000147454|Q9NYZ2-4|SLC25A37'] 122428 10185 VGDVFRGG True PC9_epitope_Rep5 805.4082516318099 805.40714993586 44.164 2 -0.3087905874217777 0.08072207084468665 0.7709172723870759 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 55273 6073 LADPSAKAV True PC9_epitope_Rep1 870.4810822188999 870.47998993586 28.173 2 -0.3088095243302927 0.08072207084468665 0.7709367725585651 ['ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 118664 10905 TYSTEPNNL True PC9_epitope_Rep1 1037.46655435357 1037.46597496793 46.83 1 -0.3088359706090656 0.08072207084468665 0.7709640065606208 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 70623 25743 LWHIWRERN True NCI_RA007_Epitope_Rep2 1308.68397297244 1308.68233490379 108.99 3 -0.3088518605411375 0.08072207084468665 0.7709803704040078 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 66273 17712 LSFHTGDVL True PC9_epitope_Rep2 987.5025459394699 987.50144993586 73.411 2 -0.309012242823375 0.08079232768665412 0.7711455620328861 ['ENSG00000100351|ENST00000344138|GRAP2', 'ENST00000461082.1_1_22:40343110-40343266:+|nuORF'] 68679 7835 LTKEMKDLYNK True NCI_RA007_Epitope_Rep1 1381.7275371468497 1381.72588490379 34.467 3 -0.30905540677475973 0.08080735655260186 0.7711900284365968 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|39|3|sense'] 138588 7722 YIDKQTIS True PC9_epitope_Rep5 966.5022115863 966.50110993586 34.644 2 -0.3091030258543654 0.08080735655260186 0.7712390884009832 ['ENST00000340413.6_1_6:150047065-150047122:-|nuORF'] 121180 15985 VESGALHVVI True PC9_epitope_Rep4 1022.5760452329 1022.57494993586 69.42 2 -0.30922532583921325 0.08085388586177229 0.7713651082940004 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 78312 8144 NYIPVKNGKQF True PC9_epitope_Rep2 1306.70337100434 1306.70173490379 36.683 3 -0.30924088176121495 0.08085388586177229 0.7713811393640446 ['ENSG00000095951|ENST00000379388|HIVEP1'] 82503 5004 PPRPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 24.618 2 -0.30924852114873363 0.08085388586177229 0.7713890122580893 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 27543 9317 FNDGNAAVV True PC9_epitope_Rep6 905.4242956187699 905.42318993586 46.004 2 -0.30934345096795507 0.08085388586177229 0.7714868528042009 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 93829 1464 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 7.6113 3 -0.30936408062602067 0.08085388586177229 0.7715081172354079 ['ZNF14|p.H273Lfs*53|1|0.1|ENSG00000105708|chr19:19712460-19712463|GTGT/-|frameshift_variant', 'ENSG00000105708|ENST00000344099|ZNF14'] 62034 11065 LLDRQILAA True PC9_epitope_Rep2 1011.6076797143498 1011.60658993586 47.879 2 -0.30937897697576494 0.08087036008101375 0.7715234724404422 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 94359 24191 RRRLWRWWKLQ True NCI_RA007_Epitope_Rep5 1682.9746161012197 1682.9735099358602 100.46 2 -0.30940802729973466 0.08090330674791649 0.771553418804145 ['chr12:54283225-54283827|537|29.56|0.0|21.5|+|1|HNRNPA1,HNRNPA1|2'] 68575 13770 LTGTWTSV True PC9_epitope_Rep6 863.43888305375 863.43778993586 64.768 2 -0.3094124529085123 0.08090330674791649 0.771557981057116 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 131131 7714 VTEGSFVYK True H1975_Epitope_Rep3 1028.5178616504397 1028.51676993586 34.655 2 -0.3094818749886385 0.0809377016273568 0.7716295514141349 ['ENSG00000057608|ENST00000380191|GDI2'] 128578 19537 VPTLVTPSA True PC9_epitope_Rep5 883.50148331031 883.50038993586 80.202 2 -0.30950819972981763 0.08095417316343173 0.7716566931487536 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 95486 13744 RWNRRHKMYRE True NCI_RA007_Epitope_Rep4 1630.8375305750599 1630.83642993586 60.092 2 -0.3095374909772848 0.08098276047453497 0.7716868949901963 ['ENSG00000108950|ENST00000592554|FAM20A'] 121925 11488 VFRYNSSL True PC9_epitope_Rep1 984.50288029264 984.50178993586 49.069 2 -0.30953925302414065 0.08098276047453497 0.7716887118664004 ['nc|ENSG00000186272|P17021-3|ZNF17', 'ENST00000602050.1_1_19:57930944-57932846:+|nuORF', 'nc|ENSG00000186272|P17021|ZNF17', 'ENSG00000186272|ENST00000307658|ZNF17'] 98479 14535 SFIQHIVSL True PC9_epitope_Rep6 1042.58113061334 1042.58002993586 67.803 2 -0.30954670049792615 0.08098276047453497 0.7716963911467966 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-4|BCLAF1'] 57360 19016 LEAHVGIGVI True PC9_epitope_Rep3 1006.5811306133398 1006.58002993586 78.367 2 -0.309591010200401 0.08098276047453497 0.771742082176778 ['ENSG00000068650|ENST00000375645|ATP11A'] 108618 21698 SYPNVFLVF True PC9_epitope_Rep6 1084.5593325396 1084.55822993586 96.348 2 -0.30964510091673214 0.08098276047453497 0.7717978641674939 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 101301 17990 SLIGTDSQAF True PC9_epitope_Rep5 1037.5029398622898 1037.50184993586 74.215 2 -0.30970300542343476 0.08103361766181635 0.7718575853364261 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'nc|ENSG00000095637|Q9BX66-4|SORBS1', 'ENST00000474353.6_1_10:97106208-97250794:-|nuORF', 'nc|ENSG00000095637|Q9BX66-7|SORBS1'] 115610 15285 TRVDPLTL True PC9_epitope_Rep1 913.5232813840499 913.52218993586 63.616 2 -0.3097428721115638 0.08103361766181635 0.7718987064767792 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 67354 13736 LSSGSENVP True PC9_epitope_Rep1 888.41887588516 888.41776993586 57.682 2 -0.3097948389710622 0.08104282386669055 0.771952313070933 ['ENSG00000178163|ENST00000326756|ZNF518B', 'ZNF518B|p.R1005Gfs*3|1|0.19|ENSG00000178163|chr4:10443316-10443316|T/-|frameshift_variant'] 64218 11465 LPGRSDVLV True PC9_epitope_Rep4 954.5498304850599 954.54872993586 51.863 2 -0.3098216323302392 0.08104282386669055 0.7719799538624518 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 72896 18947 MPTLPPPSV True PC9_epitope_Rep2 937.49428975489 937.49318993586 78.245 2 -0.30982357142824934 0.08104282386669055 0.7719819543442151 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 63578 6396 LMETNTEP True H1975_Epitope_Rep2 933.41134797657 933.41024993586 29.526 2 -0.3098331902272462 0.08104282386669055 0.7719918777402549 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'nc|ENSG00000145362|Q01484-7|ANK2'] 107686 21783 SVRKRRVRK True NCI_RA007_Epitope_Rep4 1183.7737910363496 1183.7726899358602 94.433 2 -0.309846268665018 0.08104282386669055 0.7720053706140327 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 9114 21835 AVITGFFTV True PC9_epitope_Rep4 953.5222187548899 953.52112993586 92.19 2 -0.3098619773953339 0.08104282386669055 0.7720215775618618 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 139330 12157 YLLEKSRLVS True H1975_Epitope_Rep1 1206.69722299474 1206.6961299358602 51.78 2 -0.30994791608393446 0.08105928938739675 0.7721102502262077 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'MYO9B|p.Y591*|1|0.21|ENSG00000099331|chr19:17168043-17168059|ACCTGCTGGACGAGGAG/-|frameshift_variant', 'nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.F736Cfs*26|1|0.13|ENSG00000041515|chr13:108964805-108964806|-/GTGTAGAGCTCAGCTCGCGCTGGTGTGGGCGCAA|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16'] 75607 19332 NLDPLVYLL True PC9_epitope_Rep6 1058.60119735158 1058.60010993586 87.009 2 -0.31014290052976357 0.08112805260423199 0.7723114902707174 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'TUBGCP2|p.R76S|1|0.28|ENSG00000130640|chr10:133300036-133300036|C/A|missense_variant'] 125730 18238 VKRRRRWYFRV True NCI_RA007_Epitope_Rep5 1620.9589660370798 1620.9578699358601 76.959 2 -0.31019865885251413 0.08112805260423199 0.772369050930201 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 58937 15051 LETQLADW True PC9_epitope_Rep6 974.4709114580199 974.46980993586 69.936 2 -0.31024334295858247 0.08118034901637582 0.7724151837484965 ['ENSG00000129473|ENST00000250405|BCL2L2', 'nc|ENSG00000258643|Q92843-2|BCL2L2', 'ENSG00000258643|ENST00000678502|BCL2L2-PABPN1'] 132228 16004 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.49037496793 69.493 1 -0.3103000278491952 0.08119535617027375 0.7724737119977299 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 106427 4520 STIKEVAQA True PC9_epitope_Rep6 945.5131106231698 945.51200993586 24.617 2 -0.31031272036217133 0.08119535617027375 0.7724868181178953 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 78857 17362 PAEPAFLA True PC9_epitope_Rep6 814.4225047136199 814.42140993586 79.398 2 -0.31037552193974954 0.08126556425461777 0.7725516707992426 ['ENSG00000163807|ENST00000296121|KIAA1143'] 66010 14858 LSEDKEVLSA True PC9_epitope_Rep3 1089.55536935797 1089.55426993586 62.287 2 -0.3104179511143322 0.08129848259553199 0.772595490058666 ['ENSG00000135968|ENST00000309863|GCC2'] 66274 17013 LSFHTGDVL True PC9_epitope_Rep4 987.5025459394699 987.50144993586 73.433 2 -0.3104591032074424 0.08129848259553199 0.772637993749699 ['ENSG00000100351|ENST00000344138|GRAP2', 'ENST00000461082.1_1_22:40343110-40343266:+|nuORF'] 58496 10856 LEQEHIELEG True NCI_RA007_Epitope_Rep3 1195.57208205127 1195.57098993586 49.759 2 -0.31048446343777264 0.08133285560730921 0.7726641885573301 ['ENSG00000204186|ENST00000374423|ZDBF2'] 67009 8030 LSPLRDTPP True H1975_Epitope_Rep3 994.5447451046199 994.54364993586 35.86 2 -0.310533172138017 0.08136576976819175 0.7727145037346647 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.R1075*|1|0.13|ENSG00000172493|chr4:87132334-87132341|GTATTCTC/-|frameshift_variant', 'ENST00000503369.1_1_4:88036121-88046296:+|nuORF'] 71303 21146 LYQEIIHYF True PC9_epitope_Rep1 1224.61791004488 1224.6168099358601 86.171 2 -0.31055039007646523 0.08136576976819175 0.7727322906544581 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 47516 2668 IVRPVRRWRRV True NCI_RA007_Epitope_Rep5 1491.9375023165098 1491.9364099358602 14.955 2 -0.3106507177144907 0.08148970854307365 0.7728359452710898 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'nc|ENSG00000159322|Q9BRR6-6|ADPGK'] 76669 9296 NQSDTSVSL True PC9_epitope_Rep6 949.43525422529 949.4347049679301 45.919 1 -0.3107045280306712 0.08149594311404058 0.7728915481510161 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 44371 6343 ILEQDQQDKT True NCI_RA007_Epitope_Rep2 1216.5935457718397 1216.59244993586 29.279 2 -0.3107765784193601 0.08149594311404058 0.7729660076667245 ['ENSG00000173451|ENST00000308086|THAP2'] 36480 8911 GVGGWQHFDLK True NCI_RA007_Epitope_Rep1 1242.6145559999402 1242.6129149037902 38.662 3 -0.3107826473582373 0.08149594311404058 0.7729722799989375 ['ENSG00000150893|ENST00000280481|FREM2'] 83880 13139 PVPKAALL True PC9_epitope_Rep4 807.5218248320699 807.52072993586 58.434 2 -0.3107881142225598 0.08149594311404058 0.7729779301411024 ['INHBA|p.S364Pfs*33|1|0.09|ENSG00000122641|chr7:41689842-41689842|C/-|frameshift_variant', 'INHBA|p.S389Ifs*17|1|0.31|ENSG00000122641|chr7:41689766-41689767|-/T|frameshift_variant', 'ENSG00000122641|ENST00000242208|INHBA'] 12927 18879 DLKNFYTYI True PC9_epitope_Rep3 1175.5862755634298 1175.5851699358602 77.842 2 -0.3107966284369646 0.08149594311404058 0.7729867299141113 ['ENST00000497714.1_1_10:98825376-98861127:-|nuORF'] 132145 5061 VTVISRET True PC9_epitope_Rep4 903.5025459394701 903.50144993586 26.109 2 -0.31080825529401057 0.08149594311404058 0.7729987469563817 ['nc|ENSG00000221994|Q2M218-2|ZNF630', 'ENSG00000221994|ENST00000276054|ZNF630'] 15573 6049 EAQLDSEDP True H1975_Epitope_Rep2 1002.4141844275399 1002.41308993586 28.245 2 -0.3108264682226552 0.08149594311404058 0.7730175716296204 ['ENSG00000138771|ENST00000296043|SHROOM3'] 38666 24354 HFRRGRRRSLA True PC9_epitope_Rep5 1410.8181154598199 1410.8170099358601 98.71 2 -0.3108338823310168 0.08149594311404058 0.7730252349546708 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 62690 14357 LLLLLLLLL True NCI_RA007_Epitope_Rep5 1035.7671404778698 1035.76604993586 61.909 2 -0.31097106225193105 0.08151093439363817 0.7731670456918626 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'ENSG00000109758|ENST00000382774|HGFAC', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1'] 126108 13398 VLERQCGYKLF True PC9_epitope_Rep4 1354.7067421326199 1354.70564993586 59.436 2 -0.3109854572246182 0.08151093439363817 0.7731819287673136 ['nc|ENSG00000115598|Q9HB29-2|IL1RL2', 'ENSG00000115598|ENST00000264257|IL1RL2'] 654 7143 AATCGHTEVP True PC9_epitope_Rep3 984.43348040348 984.43238993586 32.488 2 -0.31106935225492066 0.08156174442553954 0.7732686767164564 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 27217 18873 FLNQLQSL True PC9_epitope_Rep3 961.52328138405 961.52218993586 77.817 2 -0.3110891054685109 0.08156174442553954 0.773289103697444 ['ENST00000495842.5_1_3:101504262-101504385:+|nuORF'] 82480 5970 PPQTQTPQP True H1975_Epitope_Rep2 992.4927095317598 992.49160993586 27.943 2 -0.31110491429965564 0.08157527132060603 0.7733054523179257 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 66140 4229 LSENEQNTIEK True NCI_RA007_Epitope_Rep1 1303.62557417611 1303.6239149037901 20.557 3 -0.31111144949784036 0.08157527132060603 0.7733122108051462 ['ENSG00000023516|ENST00000025301|AKAP11'] 117935 16100 TWTEVSYTF True NCI_RA007_Epitope_Rep5 1132.5076908895599 1132.50717496793 68.658 1 -0.3111235569028104 0.08157527132060603 0.7733247321113256 ['ENSG00000116663|ENST00000376753|FBXO6'] 58614 4700 LEQTYHAK True NCI_RA007_Epitope_Rep2 988.4977949121999 988.49668993586 22.909 2 -0.31113521182037296 0.08159171904940991 0.7733367857386148 ['ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF', 'LMNB1|p.L380Hfs*32|1|0.07|ENSG00000113368|chr5:126819120-126819121|-/ATATTTACTT|frameshift_variant'] 58807 9801 LESNENAL True PC9_epitope_Rep3 888.41887588516 888.41776993586 42.654 2 -0.31118405938778787 0.08160670475098941 0.7733873073205908 ['LONRF3|p.H293N|1|0.16|ENSG00000175556|chrX:118978404-118978404|C/A|missense_variant'] 47470 20206 IVPDLDLQQV True PC9_epitope_Rep4 1138.62338934814 1138.6222899358602 85.86 2 -0.31121435596643376 0.08160670475098941 0.7734186445726011 ['ENSG00000159256|ENST00000400485|MORC3'] 38665 24361 HFRRGRRRSLA True PC9_epitope_Rep2 1410.8181154598199 1410.8170099358601 99.268 2 -0.31125135435971246 0.08162022777737984 0.7734569163436352 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 3252 12578 AGEYPSPVCL True H1975_Epitope_Rep2 1034.4742825862998 1034.47318993586 53.476 2 -0.3112555432743876 0.08162022777737984 0.7734612496020452 ['ENST00000604504.5_1_19:35607238-35610445:+|nuORF'] 87346 10285 QPSLHKLSI True PC9_epitope_Rep2 1021.5920296502101 1021.59092993586 44.892 2 -0.3112593669555177 0.08162022777737984 0.7734652050723173 ['ENSG00000148606|ENST00000372371|POLR3A', 'POLR3A|p.R614Gfs*21|1|0.7|ENSG00000148606|chr10:78009605-78009606|CT/-|frameshift_variant', 'ENST00000484760.1_1_10:79773365-79779077:-|nuORF'] 94393 19147 RRRRHRHLAV True NCI_RA007_Epitope_Rep3 1355.8235351934302 1355.82242993586 83.617 2 -0.31132138831999356 0.08163521111628406 0.7735293682101005 ['ENST00000589935.1_1_18:54318575-54318788:+|nuORF'] 69247 11436 LTSYHQYHNQP True PC9_epitope_Rep3 1386.63166261606 1386.63001490379 48.987 3 -0.31133646175530394 0.08163521111628406 0.7735449633445277 ['nc|ENSG00000111305|Q2KHT4-5|GSG1', 'nc|ENSG00000111305|Q2KHT4-2|GSG1', 'nc|ENSG00000111305|Q2KHT4-3|GSG1', 'nc|ENSG00000111305|Q2KHT4-6|GSG1', 'nc|ENSG00000111305|Q2KHT4-8|GSG1', 'nc|ENSG00000111305|Q2KHT4|GSG1', 'ENSG00000111305|ENST00000651961|GSG1'] 107595 18086 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 74.362 2 -0.311388135281119 0.08165165541568929 0.7735984287969616 ['ENSG00000115919|ENST00000264170|KYNU'] 141564 19161 YTNWYLESL True PC9_epitope_Rep3 1187.5498900547097 1187.5487899358602 78.922 2 -0.3114018356745711 0.08169805915634176 0.7736126051951545 ['NCKAP1L|p.L1008Sfs*26|1|0.29|ENSG00000123338|chr12:54536192-54536192|C/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 125901 12896 VLAVREPLL True PC9_epitope_Rep4 1008.6331661861999 1008.63206993586 57.483 2 -0.3114219084342652 0.08169805915634176 0.7736333760456768 ['ENST00000273308.8_2_12:56709793-56710018:-|nuORF'] 82805 16229 PRRLRRRRLLP True H1975_Epitope_Rep2 1487.9749504543897 1487.97331490379 67.635 3 -0.31146597480920707 0.08169805915634176 0.7736789778221131 ['ENST00000360807.8_2_20:17641169-17662761:-|nuORF', 'ENST00000377813.5_2_20:17660668-17662761:-|nuORF'] 17039 10526 EGENNDKFF True H1975_Epitope_Rep3 1098.4618033262998 1098.4607099358602 45.554 2 -0.31148638523304517 0.08169805915634176 0.7737001007379912 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 71202 17359 LYPDHFHLL True PC9_epitope_Rep4 1153.59202965021 1153.5903749037902 74.775 3 -0.31151111241164325 0.08169805915634176 0.7737256922308244 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 79313 5827 PAQSSLYEAR True H1975_Epitope_Rep3 1120.5512870370399 1120.55018993586 27.434 2 -0.31156318751954093 0.08171011171584074 0.7737795916336176 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 107364 8622 SVLIQKQIFK True NCI_RA007_Epitope_Rep1 1202.7386938838997 1202.7370349037901 37.539 3 -0.3115813649245981 0.08171011171584074 0.7737984071274525 ['ENSG00000205339|ENST00000379719|IPO7', 'ENST00000528833.1_1_11:9431619-9435997:+|nuORF', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 77981 16868 NVPDSFNEV True PC9_epitope_Rep3 1019.45598966987 1019.4554749679301 70.038 1 -0.31159727366972856 0.08171011171584074 0.7738148748754397 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 62486 13677 LLIHRKNLNYL True PC9_epitope_Rep6 1395.83505388023 1395.83341490379 64.394 3 -0.3116337211775189 0.08171011171584074 0.7738526050222125 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 19346 10896 ELLHGDLASL True PC9_epitope_Rep3 1066.56587447202 1066.56476993586 46.894 2 -0.31167631498851006 0.08172508861756597 0.7738967012016627 ['ENSG00000175029|ENST00000309035|CTBP2'] 108285 20647 SYIGPIQNIP True PC9_epitope_Rep5 1100.5866099166 1100.58550993586 84.473 2 -0.3116781753513552 0.08172508861756597 0.773898627267605 ['ENSG00000284526|ENST00000640006|unknown'] 64884 11541 LQECHWWRRDW True H1975_Epitope_Rep1 1613.7309998178498 1613.7299099358602 49.376 2 -0.3117318449448538 0.08179230590214998 0.7739541953742669 ['ENST00000368192.8_1_1:157095491-157095569:-|nuORF'] 46587 15137 ITASPISDLNP True PC9_epitope_Rep2 1126.58700383942 1126.5859099358602 63.484 2 -0.3117652570864171 0.08179230590214998 0.7739887924159792 ['ENSG00000158125|ENST00000379416|XDH'] 78794 6128 PAAPSPATAA True PC9_epitope_Rep4 852.4341320264799 852.43302993586 30.583 2 -0.31179669061713994 0.08179230590214998 0.7740213427668421 ['ENSG00000101191|ENST00000395343|DIDO1'] 22873 12203 EVDEYRRHWWR True NCI_RA007_Epitope_Rep1 1630.7753071579798 1630.7742099358602 51.435 2 -0.3118668310946501 0.08184454548709319 0.7740939826151382 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN'] 70139 14865 LVPPDQPEV True PC9_epitope_Rep1 992.51786165044 992.51676993586 61.997 2 -0.31188324166431486 0.08186098132932353 0.7741109794147496 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 12508 2627 DKIEARKRAK True NCI_RA007_Epitope_Rep4 1213.72550343125 1213.72384490379 14.727 3 -0.3119433293080553 0.08189238535066051 0.7741732182823107 ['ENSG00000100077|ENST00000324198|GRK3'] 8436 5581 ATNRPDAL True PC9_epitope_Rep1 856.4402800360799 856.43918993586 26.297 2 -0.3119465336352931 0.08189238535066051 0.7741765375379788 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 84775 2557 QDVDNASLAR True PC9_epitope_Rep6 1087.52580056519 1087.52470993586 14.764 2 -0.31195628843159695 0.08189238535066051 0.774186642336321 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 75411 11828 NIVHDLPAA True PC9_epitope_Rep2 948.5028802926399 948.50178993586 50.827 2 -0.31202143346563244 0.08190881915979022 0.7742541298092451 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1', 'ENST00000411828.5_1_21:40547518-40555177:-|nuORF'] 62495 23928 LLILWELLIII True NCI_RA007_Epitope_Rep2 1350.8890465156999 1350.8874149037902 100.45 3 -0.31212761791820953 0.0819431517147562 0.774364151181799 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|103|2|sense'] 99909 20351 SIMIQNVDV True PC9_epitope_Rep3 1017.51648175145 1017.51538993586 83.528 2 -0.31219838836543967 0.0819581170574548 0.77443749187105 ['nc|ENSG00000183715|Q14982-4|OPCML', 'nc|ENSG00000183715|Q14982|OPCML', 'nc|ENSG00000183715|Q14982-3|OPCML', 'ENST00000529038.5_1_11:132290089-133402241:-|nuORF', 'ENSG00000183715|ENST00000524381|OPCML'] 120825 12896 VELMKFVSKV True H1975_Epitope_Rep1 1178.67331674602 1178.67220993586 54.676 2 -0.31222758885873225 0.0819581170574548 0.7744677559033372 ['ENSG00000124103|ENST00000371328|FAM209A'] 80159 21350 PFSLSPSLS True PC9_epitope_Rep5 933.48074786573 933.47964993586 87.181 2 -0.3123512132915587 0.08199244688657802 0.7745959026742724 ['ENST00000357375.4_1_19:51914355-51919928:-|nuORF'] 35592 6994 GTARGGVRQP True PC9_epitope_Rep6 997.5417254128499 997.54062993586 35.881 2 -0.31240939924881095 0.08200887743413517 0.7746562282026759 ['PTPN14|p.Y570Ifs*131|1|0.11|ENSG00000152104|chr1:214384147-214384148|-/T|frameshift_variant'] 84497 21570 QALSPLLSV True PC9_epitope_Rep2 926.5436824754601 926.5431349679301 88.44 1 -0.31245335475751096 0.08201943554593125 0.7747018047152832 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 82741 23785 PRIRYRKKKRI True NCI_RA007_Epitope_Rep3 1512.9841181557597 1512.98248490379 103.09 3 -0.3124760774553134 0.08201943554593125 0.7747253669771463 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 70608 26195 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 109.16 3 -0.31254430677341655 0.08201943554593125 0.7747961237716563 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 46968 7183 ITPQGYSD True H1975_Epitope_Rep3 879.3974121645899 879.39630993586 32.604 2 -0.3125550185230489 0.08201943554593125 0.7748072332154798 ['ENSG00000169554|ENST00000627532|ZEB2', 'nc|ENSG00000169554|O60315-2|ZEB2'] 79127 5498 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 26.157 2 -0.31255723360911414 0.08201943554593125 0.7748095305710102 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 18387 10307 EITLWDQARVR True H1975_Epitope_Rep1 1385.7415474182098 1385.7404499358602 44.59 2 -0.3127063483709301 0.08207018736913689 0.7749642073457655 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'RIMS2|p.S809Kfs*25|1|0.17|ENSG00000176406|chr8:103975486-103975487|-/A|frameshift_variant'] 70159 20994 LVPRFQVIL True PC9_epitope_Rep4 1083.68045073179 1083.67934993586 88.915 2 -0.3127289574893577 0.08207018736913689 0.774987663894508 ['ENST00000372070.7_1_1:46016813-46018162:+|nuORF'] 46005 19984 ISFTEFVKV True PC9_epitope_Rep4 1068.58554728744 1068.5844499358602 85.001 2 -0.3127687442532993 0.08208661417322835 0.7750289445691626 ['ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'ENSG00000187446|ENST00000334660|CHP1'] 23938 18046 EYLKLLHSF True PC9_epitope_Rep4 1148.6229954253201 1148.6213549037902 77.48 3 -0.3128018472713829 0.0821015711678179 0.7750632930975525 ['ENSG00000198911|ENST00000361204|SREBF2', 'ENST00000491541.1_1_22:42287274-42295397:+|nuORF', 'ENST00000424354.5_1_22:42276758-42295397:+|nuORF'] 990 6045 AEAAAVAGL True NCI_RA007_Epitope_Rep5 771.41266830591 771.41156993586 29.933 2 -0.3128074831134046 0.0821015711678179 0.7750691412215893 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2', 'ENST00000372343.7_1_1:44412628-44412673:+|nuORF'] 34946 13112 GQPMIHIYL True NCI_RA007_Epitope_Rep3 1070.55828699378 1070.5571899358602 58.856 2 -0.31281519664582524 0.08211799652846125 0.7750771454046035 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF'] 107685 22388 SVRKRRVRK True H1975_Epitope_Rep3 1183.7737910363496 1183.7726899358602 93.595 2 -0.31289568548613206 0.08213442130126691 0.7751606746620584 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 19493 13510 ELPEWSEGY True H1975_Epitope_Rep3 1108.4713053808398 1108.47020993586 57.244 2 -0.31291822398172997 0.08216873937550327 0.7751840670068011 ['ENSG00000143157|ENST00000367876|POGK'] 18096 9740 EIIAKQGG True PC9_epitope_Rep2 814.45486747106 814.45376993586 42.805 2 -0.3130087922685747 0.08218075113170749 0.7752780773031686 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 16682 13001 EERKEYFYKYF True H1975_Epitope_Rep2 1600.7561944228398 1600.75453490379 55.125 3 -0.3130215055758667 0.08218075113170749 0.7752912751750534 ['NLRP12|p.A368E|1|0.18|ENSG00000142405|chr19:53810556-53810556|G/T|missense_variant'] 108096 20713 SYATLLHVL True PC9_epitope_Rep3 1015.5702315764698 1015.56912993586 84.946 2 -0.31302498770556514 0.08218075113170749 0.7752948900854804 ['ENSG00000183840|ENST00000329321|GPR39'] 15042 7053 DYNENGSNFSK True H1975_Epitope_Rep1 1273.52110910757 1273.5200099358601 32.162 2 -0.3130411585472705 0.08218075113170749 0.7753116778938385 ['ENSG00000198105|ENST00000395867|ZNF248'] 104936 6855 SRDEFTNTC True PC9_epitope_Rep5 1071.4291232990302 1071.4280299358602 31.338 2 -0.31307654250271505 0.08219423173262722 0.7753484138033497 ['ENSG00000169504|ENST00000374379|CLIC4'] 96685 23613 SALALSLLLV True PC9_epitope_Rep2 998.6375828603 998.63648993586 96.296 2 -0.3130876439690221 0.08219423173262722 0.7753599399872819 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000563753.1_1_15:73884305-73925556:-|nuORF', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF', 'nc|ENSG00000156642|Q9Y639-4|NPTN'] 37973 13740 HAGVISVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 58.139 2 -0.31308874421163496 0.08219423173262722 0.7753610823371054 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 55727 11469 LALMVYSIVK True NCI_RA007_Epitope_Rep2 1135.66750308959 1135.6664099358602 49.205 2 -0.3131000361864772 0.08221677608629542 0.7753728066149721 ['ENSG00000011083|ENST00000230671|SLC6A7'] 136061 7744 WRFRPNTR True PC9_epitope_Rep3 1131.6049943757498 1131.60334490379 34.78 3 -0.31310866091932504 0.08221677608629542 0.7753817617216291 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant'] 131629 4113 VTLSSRDSME True NCI_RA007_Epitope_Rep4 1123.51793830343 1123.5168499358601 22.104 2 -0.3131262808233411 0.08221677608629542 0.7754000570577914 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 104657 11807 SQTGFVVL True H1975_Epitope_Rep3 849.45961849833 849.4590749679301 50.562 1 -0.3131320385014122 0.08221677608629542 0.7754060355917105 ['ENSG00000133048|ENST00000255409|CHI3L1'] 107684 22605 SVRKRRVRK True H1975_Epitope_Rep2 1183.7737910363496 1183.7726899358602 93.387 2 -0.3131842701031458 0.08221677608629542 0.7754602739620694 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 70832 7548 LYDEDILER True NCI_RA007_Epitope_Rep1 1164.5662683948399 1164.56516993586 33.353 2 -0.31318801821468106 0.08221677608629542 0.7754641663030039 ['ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 113242 15372 TLQTLEKL True PC9_epitope_Rep2 944.5542471591599 944.55314993586 64.411 2 -0.3132223947685772 0.08221677608629542 0.775499867090574 ['ENSG00000159708|ENST00000329956|LRRC36'] 36680 21463 GVIQDFINA True PC9_epitope_Rep2 975.5025459394699 975.50144993586 88.03 2 -0.31329408877673937 0.08221677608629542 0.7755743310124171 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 141879 20706 YVDPVITSI True PC9_epitope_Rep5 1005.53826274185 1005.53767496793 84.703 1 -0.3133182836223128 0.08221677608629542 0.7755994631226231 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 142445 19959 YYFEGIKQTF True PC9_epitope_Rep5 1294.6233893481397 1294.6228749679299 81.825 1 -0.31342266246456874 0.082230251860332 0.7757078998467 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 69265 12483 LTTIGVLEEP True PC9_epitope_Rep1 1070.58594121026 1070.5848499358601 52.883 2 -0.31347570931181923 0.082230251860332 0.7757630179624447 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2'] 76364 8521 NPYYGGESA True PC9_epitope_Rep2 956.3875757568799 956.3870249679301 38.138 1 -0.3134809210685893 0.082230251860332 0.7757684335450019 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 108034 19333 SYADQMFLL True NCI_RA007_Epitope_Rep2 1086.50558271458 1086.5044899358602 80.103 2 -0.3135216728572089 0.08224666845541544 0.775810781110265 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 117905 7309 TWNRLWRWRHQ True NCI_RA007_Epitope_Rep1 1637.84399585449 1637.84288993586 32.422 2 -0.3135853686448381 0.08227508495796816 0.775876978310869 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 8412 7686 ATLSNPKPQKQ True H1975_Epitope_Rep1 1210.66698549562 1210.6658899358602 34.53 2 -0.3135859722667957 0.08227508495796816 0.7758776056797633 ['ENSG00000198824|ENST00000361283|CHAMP1'] 129060 21614 VQNVDLVLA True PC9_epitope_Rep1 969.5494961318898 969.5489449679301 87.964 1 -0.3136122370788398 0.08227508495796816 0.7759049045323025 ['ENST00000424556.2_1_11:1856509-1858658:+|nuORF', 'ENSG00000149043|ENST00000341958|SYT8'] 86941 20031 QLVEGLHYL True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 82.453 2 -0.3136371287478871 0.08227508495796816 0.7759307775592452 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant'] 10619 12681 CNNRGVCLDQY True H1975_Epitope_Rep2 1283.5386908313499 1283.53758993586 53.878 2 -0.31364875506321954 0.08227508495796816 0.7759428627034491 ['ENSG00000136011|ENST00000388887|STAB2'] 81395 7115 PLDSSNKNAVS True PC9_epitope_Rep1 1130.5567663403 1130.5556699358601 32.177 2 -0.31366299073751946 0.08228708373573702 0.7759576605828353 ['ENST00000570184.1_2_16:57212686-57219966:-|nuORF'] 19141 17634 ELGSALAP True NCI_RA007_Epitope_Rep1 756.40176926904 756.40122496793 72.729 1 -0.31368462334148034 0.08228708373573702 0.7759801483570903 ['ENST00000490187.1_1_20:25205760-25206148:+|nuORF'] 45098 20814 IPLGFGVAA True PC9_epitope_Rep2 843.4854393233499 843.48434993586 85.502 2 -0.31376823841070645 0.08228708373573702 0.776067078401091 ['ENSG00000132603|ENST00000254940|NIP7', 'ENST00000485801.1_1_3:132120486-132120636:+|nuORF'] 22264 7476 ETDALDIDY True H1975_Epitope_Rep2 1053.4502355830898 1053.4491299358601 33.704 2 -0.3137764579743044 0.08228708373573702 0.7760756246538615 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 40927 10447 HSSMLATLTL True PC9_epitope_Rep3 1072.5586809166 1072.55758993586 45.121 2 -0.3137873613073216 0.08230349637843155 0.7760869615697568 ['ENST00000220597.4_1_8:81881203-81881314:-|nuORF'] 53577 4284 KRRFQYEEEVK True NCI_RA007_Epitope_Rep5 1510.7892258866202 1510.78759490379 23.058 3 -0.3138402698169128 0.08233631990271295 0.7761419777122093 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 81105 17301 PIYVEVSIL True NCI_RA007_Epitope_Rep4 1031.5902983147098 1031.58920993586 74.916 2 -0.3138506220620252 0.08233631990271295 0.7761527430553732 ['ZP4|p.V509Wfs*8|1|0.26|ENSG00000116996|chr1:237882520-237882520|C/-|frameshift_variant', 'ENSG00000116996|ENST00000366570|ZP4'] 69297 16602 LTTTRRAV True PC9_epitope_Rep4 916.5454138109599 916.54430993586 71.835 2 -0.3138924053497139 0.08234978540772532 0.7761961960418694 ['nc|ENSG00000120594|Q6UX71-2|PLXDC2', 'ENSG00000120594|ENST00000377252|PLXDC2', 'nc|ENSG00000120594|Q6UX71-3|PLXDC2', 'ENST00000377238.2_1_10:20332341-20568745:+|nuORF'] 124071 13840 VGSLGTIII True NCI_RA007_Epitope_Rep3 871.53786881903 871.53676993586 61.77 2 -0.31389294624239295 0.08234978540772532 0.776196758574038 ['ENSG00000104643|ENST00000221086|MTMR9'] 142801 6838 YYRYIRFFPD True PC9_epitope_Rep6 1438.7033710043397 1438.70173490379 35.17 3 -0.31392141157187653 0.08234978540772532 0.7762263636149399 ['nc|ENSG00000112146|Q9UK97-3|FBXO9', 'ENSG00000112146|ENST00000323557|FBXO9', 'nc|ENSG00000112146|Q9UK97|FBXO9'] 83322 13458 PTEATPSSTF True H1975_Epitope_Rep2 1036.47130538084 1036.47020993586 56.901 2 -0.31393541618120935 0.08236324946801853 0.7762409295969046 ['ENSG00000164830|ENST00000517566|OXR1', 'nc|ENSG00000164830|Q8N573|OXR1', 'nc|ENSG00000164830|Q8N573-3|OXR1', 'nc|ENSG00000164830|Q8N573-5|OXR1', 'nc|ENSG00000164830|Q8N573-2|OXR1'] 57876 18298 LEFLGSNNL True PC9_epitope_Rep2 1005.5131106231701 1005.51200993586 75.707 2 -0.3139357641388246 0.08236324946801853 0.7762412915077901 ['ENST00000468586.5_1_1:62149195-62160394:-|nuORF', 'ENST00000488410.5_1_1:62149195-62160440:-|nuORF'] 359 7296 AAKDAEKIREL True NCI_RA007_Epitope_Rep5 1242.6932002434598 1242.6915449037901 34.741 3 -0.31399004358828125 0.08236324946801853 0.7762977508225185 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 102588 9672 SLWCSVTSV True PC9_epitope_Rep2 980.4637179026 980.46262993586 42.541 2 -0.31413481918143943 0.08244823516790044 0.7764483720771018 ['ENSG00000169393|ENST00000339841|ELSPBP1'] 47289 15951 IVDNTTMQL True PC9_epitope_Rep4 1033.51139637101 1033.51028993586 69.284 2 -0.31413674975145456 0.08244823516790044 0.7764503809082227 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 336 11300 AAIGALQEA True PC9_epitope_Rep6 842.4497820906199 842.44868993586 54.481 2 -0.31415165298175624 0.08244823516790044 0.7764658885577085 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 96727 19858 SALPTVVAY True PC9_epitope_Rep6 919.5014833103098 919.5009349679301 89.043 1 -0.31431230132221627 0.08246464140754912 0.7766330831102143 ['ENSG00000104450|ENST00000388798|SPAG1', 'nc|ENSG00000104450|Q07617-2|SPAG1'] 138292 6257 YHDDTENSL True PC9_epitope_Rep3 1092.43598250128 1092.4348899358602 29.104 2 -0.3143609137809837 0.08247809762202754 0.7766836876343413 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 109401 5636 TDDMIMDRVFR True H1975_Epitope_Rep1 1397.64315589989 1397.64151490379 26.747 3 -0.3143618928349751 0.08247809762202754 0.7766847068618893 ['ENSG00000034239|ENST00000262103|CLXN'] 131611 21691 VTLQLLTLV True PC9_epitope_Rep6 998.6375828603 998.63648993586 96.322 2 -0.31436480842203873 0.08247809762202754 0.7766877420968318 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 61714 7299 LLAALPREEHQ True H1975_Epitope_Rep1 1275.6935345966301 1275.6924299358602 33.086 2 -0.314389069558569 0.08249302724737181 0.776712999570952 ['ENST00000262376.10_1_16:4925091-4925301:+|nuORF'] 125729 17573 VKRRRRWYFRV True NCI_RA007_Epitope_Rep5 1620.9589660370798 1620.9578699358601 74.38 2 -0.31439866134292294 0.08249302724737181 0.7767229856207116 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 27180 17327 FLLLFRCQQLK True NCI_RA007_Epitope_Rep1 1407.80606225107 1407.80496993586 71.53 2 -0.31442242368197587 0.0825094309262868 0.7767477255713916 ['nc|ENSG00000104327|P05937-2|CALB1', 'ENSG00000104327|ENST00000265431|CALB1'] 42669 16849 IEICNIEAP True H1975_Epitope_Rep2 1000.4899326504399 1000.4888299358599 70.057 2 -0.3146013609056772 0.08256159044588264 0.7769340644950781 ['ENSG00000144182|ENST00000651691|LIPT1'] 131904 12287 VTRPQELDL True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 58.647 2 -0.3146067033972961 0.08257651601830664 0.7769396290652429 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 16422 23110 EEKLTLMLL True PC9_epitope_Rep1 1088.61513316356 1088.6140299358601 93.695 2 -0.3146097250089966 0.08257651601830664 0.7769427763083032 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 84048 18351 PVVQNWHYFQE True PC9_epitope_Rep5 1445.67279915205 1445.67115490379 75.604 3 -0.31464924190732746 0.08262867154119813 0.7769839380844724 ['TECPR2|p.N1004Efs*17|1|0.25|ENSG00000196663|chr14:102445878-102445879|-/G|frameshift_variant'] 125301 17159 VINKVVFSL True PC9_epitope_Rep1 1017.6222671493299 1017.6211699358599 70.823 2 -0.3148014562331742 0.08265999284948158 0.7771425206210685 ['ENSG00000273540|ENST00000614907|AGBL1', 'nc|ENSG00000273540|Q96MI9|AGBL1'] 6461 13225 APSGNFVAC True PC9_epitope_Rep3 864.37998827864 864.37943496793 55.905 1 -0.3148225990348016 0.08265999284948158 0.7771645520447596 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 107605 17761 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 73.336 2 -0.31485095708821076 0.08265999284948158 0.7771941035341463 ['ENSG00000115919|ENST00000264170|KYNU'] 136958 10149 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.38026993586 46.715 2 -0.31494950297325397 0.08267343546109433 0.7772968105938591 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 118492 15151 TYQCSDTDIF True PC9_epitope_Rep3 1191.47540478511 1191.4743099358602 63.419 2 -0.31503202155115795 0.08267343546109433 0.7773828302317058 ['ATP10D|p.G1220C|1|0.25|ENSG00000145246|chr4:47581969-47581969|G/T|missense_variant'] 70620 24557 LWHIWRERN True NCI_RA007_Epitope_Rep2 1308.68397297244 1308.68233490379 103.16 3 -0.31507490568377655 0.08267343546109433 0.7774275398352184 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 122159 5979 VGAGPAAAAAA True PC9_epitope_Rep4 825.4344663796498 825.43336993586 29.944 2 -0.3151204990064606 0.0826898326898327 0.7774750784607193 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN'] 78774 6138 PAAMSWYEEF True NCI_RA007_Epitope_Rep5 1229.5063109905698 1229.5052099358602 30.291 2 -0.31514892570445324 0.08272410403074448 0.7775047203771273 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 94590 18482 RRSRKVGRRA True NCI_RA007_Epitope_Rep3 1240.77010263824 1240.7690099358601 80.875 2 -0.31520407612416657 0.08273754200328877 0.7775622335934839 ['ENST00000392275.1_1_19:30206050-30206326:-|nuORF'] 132042 10113 VTTDAGSRWEK True PC9_epitope_Rep3 1248.6098645423197 1248.60820490379 43.85 3 -0.3153079348701001 0.08273754200328877 0.7776705604507441 ['ENST00000256495.3_1_3:5024925-5025057:+|nuORF'] 67601 13397 LSVIDMGLSTV True PC9_epitope_Rep2 1133.60021137541 1133.59910993586 56.813 2 -0.3153308522516001 0.08273754200328877 0.7776944670235035 ['OR1B1|p.G176Afs*107|1|0.34|ENSG00000280094|chr9:122629009-122629009|C/-|frameshift_variant', 'ENSG00000280094|ENST00000623530|OR1B1'] 83030 10748 PSKTIPGL True PC9_epitope_Rep2 811.4803539429099 811.47924993586 46.661 2 -0.31535987552490213 0.08275393662085113 0.7777247447331535 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 1305 4726 AEDREQLVA True H1975_Epitope_Rep1 1029.50908787189 1029.50798993586 23.232 2 -0.3153866087710831 0.0827882037533512 0.7777526351129135 ['ENSG00000100867|ENST00000250383|DHRS2', 'ENST00000556729.1_1_14:24108037-24109131:+|nuORF', 'ENST00000553896.5_1_14:24099332-24110898:+|nuORF', 'nc|ENSG00000100867|Q13268-2|DHRS2'] 16047 18457 EDWERTEVLH True PC9_epitope_Rep1 1312.60477916188 1312.60312490379 75.786 3 -0.3154163187333274 0.08280459687941234 0.7777836329411623 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.D1231Tfs*9|1|0.27|ENSG00000163554|chr1:158648532-158648532|C/-|frameshift_variant', 'SPTA1|p.D1280Gfs*3|1|0.07|ENSG00000163554|chr1:158647598-158647599|-/T|frameshift_variant', 'SPTA1|p.T1344Pfs*5|1|0.22|ENSG00000163554|chr1:158645353-158645353|G/-|frameshift_variant', 'SPTA1|p.D1530Rfs*4|1|0.28|ENSG00000163554|chr1:158642831-158642832|-/T|frameshift_variant', 'SPTA1|p.K1686Lfs*14|1|0.06|ENSG00000163554|chr1:158638166-158638167|-/GAAGATAG|frameshift_variant', 'SPTA1|p.W1920*|1|0.3|ENSG00000163554|chr1:158626912-158626912|C/-|frameshift_variant', 'SPTA1|p.T573Lfs*6|1|0.26|ENSG00000163554|chr1:158669525-158669525|G/-|frameshift_variant', 'SPTA1|p.Q902Sfs*21|1|0.18|ENSG00000163554|chr1:158657578-158657578|G/-|frameshift_variant', 'SPTA1|p.W246Lfs*30|1|0.18|ENSG00000163554|chr1:158678476-158678477|-/A|frameshift_variant'] 68961 11021 LTPEQLEAV True H1975_Epitope_Rep1 998.5284263341399 998.5273299358599 47.353 2 -0.31544019024583647 0.08283886188161281 0.7778085406749349 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 79160 19467 PALVYQDYQY True PC9_epitope_Rep4 1258.58700383942 1258.58536490379 82.996 3 -0.315529966053682 0.08285377274189513 0.77790222499521 ['nc|ENSG00000284491|A0A1W2PP97|THSD8'] 13484 9422 DNIQTVKRLRT True PC9_epitope_Rep2 1342.7680965192199 1342.76698993586 41.582 2 -0.31553099825959846 0.08285377274189513 0.777903302245351 26431 20795 FICVGRNVLT True PC9_epitope_Rep1 1120.6062998153598 1120.60520993586 84.818 2 -0.3155414775257681 0.08286720160122951 0.7779142389502636 ['ENSG00000166111|ENST00000610966|SVOP'] 80580 11075 PGPSLSTGL True PC9_epitope_Rep2 827.43888305375 827.43778993586 47.918 2 -0.31556872440686723 0.08286720160122951 0.7779426763672034 ['ENST00000433234.2_11:204190-204341:-|nuORF'] 82140 9418 PNIICDCCKK True H1975_Epitope_Rep3 1135.51880733391 1135.51770993586 41.229 2 -0.3155856752322377 0.08286720160122951 0.777960368694815 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF', 'ENST00000508455.1_1_1:1558985-1559326:+|nuORF'] 97772 6227 SEIYRWICDNF True PC9_epitope_Rep6 1444.6445357988798 1444.64287490379 32.431 3 -0.31563462405180737 0.0829014618106437 0.7780114623931267 ['ENSG00000065970|ENST00000162391|FOXJ2', 'nc|ENSG00000065970|Q9P0K8-2|FOXJ2'] 127574 17027 VNSYFDSFL True PC9_epitope_Rep5 1090.49712620586 1090.4960299358602 70.512 2 -0.31566931324236114 0.0829134055251778 0.7780476749044264 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 133665 19567 VYAPPVGGF True PC9_epitope_Rep2 905.4647038787698 905.4641549679301 80.646 1 -0.31567169118965455 0.0829134055251778 0.7780501573752682 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 98399 11457 SFDRKWGQI True PC9_epitope_Rep1 1135.57744221523 1135.5757949037902 48.947 3 -0.31568235001238365 0.0829134055251778 0.778061284867808 ['ENSG00000093167|ENST00000336686|LRRFIP2'] 17256 8110 EHAGVISV True PC9_epitope_Rep4 810.42356734278 810.42246993586 38.649 2 -0.31571375353646347 0.0829134055251778 0.7780940707049817 ['ENST00000531779.1_1_1:110946539-110950281:-|nuORF', 'ENSG00000134248|ENST00000602318|LAMTOR5'] 44591 22375 ILQFQFAEV True PC9_epitope_Rep5 1093.5807962601698 1093.5796899358602 91.077 2 -0.31577662415256635 0.08292831105710814 0.7781597154636094 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1'] 108154 17396 SYFSFWWWWWK True PC9_epitope_Rep6 1707.7663056140698 1707.76465490379 79.529 3 -0.3157827091848449 0.08292831105710814 0.7781660694716206 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 115553 11363 TRSNPLSL True PC9_epitope_Rep5 886.4872302284999 886.48612993586 48.705 2 -0.31584482698167254 0.08294321552371083 0.7782309378618539 ['ENSG00000149346|ENST00000334534|SLX4IP'] 13193 19893 DLSDLYQEGF True PC9_epitope_Rep3 1185.51898384925 1185.51788993586 81.76 2 -0.3158740513719059 0.08294321552371083 0.7782614593491617 ['TSPAN12|p.C206F|1|0.22|ENSG00000106025|chr7:120788893-120788893|C/A|missense_variant'] 14701 6451 DVKADNLSSD True PC9_epitope_Rep5 1062.4829326937001 1062.48182993586 29.788 2 -0.31589949082823615 0.08301320420962353 0.7782880294931371 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 91125 14096 RFVEKYTEL True PC9_epitope_Rep3 1183.62372370131 1183.62208490379 59.305 3 -0.3159356713043295 0.08302662140432375 0.7783258205913899 ['ENSG00000181610|ENST00000313608|MRPS23'] 73700 6487 MYRRWWEQFVQ True NCI_RA007_Epitope_Rep3 1627.77180200067 1627.7701649037901 32.547 3 -0.31593568167150526 0.08302662140432375 0.7783258314205015 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 58705 10584 LERRLDEL True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 48.452 2 -0.3159374315330916 0.08302662140432375 0.7783276592551097 ['ENSG00000120645|ENST00000538872|IQSEC3'] 36436 17317 GVGAVNISV True PC9_epitope_Rep2 814.45486747106 814.45376993586 71.868 2 -0.3161083601893202 0.08305938683627528 0.7785062380636899 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 86676 17140 QLIDIIHTA True PC9_epitope_Rep6 1022.5760452329 1022.57494993586 78.514 2 -0.31615073565800555 0.08305938683627528 0.7785505204270893 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 130852 6506 VTAYYRER True NCI_RA007_Epitope_Rep5 1056.53524305008 1056.5341499358601 31.691 2 -0.3161967455433572 0.0830698322525323 0.7785986054078666 ['ENST00000587236.1_1_19:56666485-56666563:+|nuORF'] 125732 23754 VKRRRRWYFRV True PC9_epitope_Rep1 1620.9589660370798 1620.9578699358601 96.163 2 -0.31624795360931496 0.0830698322525323 0.778652128713578 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 68402 10450 LTETDTLEI True PC9_epitope_Rep5 1033.5179212200899 1033.5168299358602 45.182 2 -0.3162754182916427 0.0830698322525323 0.7786808376166952 ['nc|ENSG00000175115|Q6VY07-2|PACS1', 'ENSG00000175115|ENST00000320580|PACS1'] 77064 17521 NRLDFSTAI True PC9_epitope_Rep3 1035.53490869691 1035.53380993586 72.579 2 -0.31630439508885094 0.0830698322525323 0.7787111290133296 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32', 'ENST00000520511.1_1_8:124539464-124553254:-|nuORF', 'nc|ENSG00000156804|Q969P5-2|FBXO32', 'ENST00000521719.5_1_8:124526414-124553254:-|nuORF'] 41925 15797 IDCFRRVP True PC9_epitope_Rep3 1004.5225701914 1004.52146993586 65.918 2 -0.31634942295558005 0.0830698322525323 0.7787582034983265 ['nc|ENSG00000167984|Q7RTR2-3|NLRC3'] 138477 7801 YHQQPWRP True PC9_epitope_Rep2 1110.5359117564199 1110.53480993586 35.377 2 -0.3163635770021314 0.08307879177607488 0.7787730018403868 ['ENSG00000101680|ENST00000389658|LAMA1', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant', 'LAMA1|p.H607Afs*3|1|0.16|ENSG00000101680|chr18:7036008-7036009|-/A|frameshift_variant', 'ENST00000579014.5_1_18:7043201-7117719:-|nuORF'] 118462 16592 TYPKIWVKV True PC9_epitope_Rep3 1132.66446631448 1132.6633699358601 68.958 2 -0.3163636832416651 0.08307879177607488 0.7787731129177098 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 132359 6895 VVAAHLAGA True PC9_epitope_Rep3 807.46028720467 807.45918993586 31.536 2 -0.31642024227280074 0.08307879177607488 0.7788322511404538 ['ENSG00000160161|ENST00000291495|CILP2'] 13752 7322 DQEEEGTQQAK True H1975_Epitope_Rep3 1261.5422384749697 1261.5406049037902 33.139 3 -0.31646482793317976 0.08307879177607488 0.7788788751737656 ['TAL1|p.R253Q|1|0.17|ENSG00000162367|chr1:47219958-47219958|C/T|missense_variant'] 87478 9673 QQDPQQYNV True PC9_epitope_Rep5 1118.49925146418 1118.49867496793 42.175 1 -0.3164735961102851 0.08307879177607488 0.7788880447541441 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 35073 7755 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42883496793 39.19 1 -0.31650451658491713 0.08307879177607488 0.77892038216824 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 13411 6534 DLYTHSEYY True H1975_Epitope_Rep3 1189.49276910141 1189.49166993586 30.101 2 -0.3165108094315015 0.08309517004858531 0.7789269636561678 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR'] 17820 8469 EHSYIQKEL True PC9_epitope_Rep1 1145.57168812845 1145.5700549037902 37.411 3 -0.3167846516879276 0.0832365812271144 0.7792134551576889 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 9545 13732 AVYTETGL True PC9_epitope_Rep5 852.4228986364399 852.42180993586 57.843 2 -0.31690364165607304 0.08328421654253514 0.7793379956181634 ['ENST00000576313.1_1_17:55156597-55162272:-|nuORF'] 128692 7231 VPVTKEGL True PC9_epitope_Rep4 841.4909186266099 841.48982993586 35.119 2 -0.3169082918303017 0.08328421654253514 0.7793428633756104 ['ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 70996 15139 LYIDWTENYKH True PC9_epitope_Rep5 1480.69867954672 1480.6975899358602 63.237 2 -0.3169140605479537 0.08328421654253514 0.7793489020833804 ['CON__Q1A7A4'] 24929 4056 FCKWRTWKWKH True H1975_Epitope_Rep3 1604.8186926234398 1604.8170449037898 20.73 3 -0.31692951077039344 0.08328421654253514 0.7793650757952907 ['ENST00000379143.9_1_20:5098158-5098257:-|nuORF'] 16185 5743 EEEDNGELRER True H1975_Epitope_Rep1 1374.60115033342 1374.6000499358602 27.159 2 -0.316981946322151 0.08331398567678103 0.7794199708944054 ['ENSG00000186862|ENST00000619208|PDZD7'] 70665 2312 LWHIWRERN True PC9_epitope_Rep5 1308.68397297244 1308.68233490379 12.833 3 -0.31701224518317167 0.08331398567678103 0.7794516938753168 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 31576 6788 GEELARLRSV True NCI_RA007_Epitope_Rep2 1128.62512068364 1128.62402993586 31.02 2 -0.3170397367009873 0.08331398567678103 0.7794804794121759 ['ENSG00000165105|ENST00000376447|RASEF', 'nc|ENSG00000165105|Q8IZ41-2|RASEF'] 55279 21749 LADRRYDML True PC9_epitope_Rep1 1151.57572796307 1151.57462993586 88.49 2 -0.3170548733480093 0.08331398567678103 0.779496329289665 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 19892 13592 ELTQSELVL True PC9_epitope_Rep5 1030.5546410819798 1030.55354993586 57.306 2 -0.3172048949998498 0.08336607493660035 0.7796534488018658 ['ENSG00000137218|ENST00000373018|FRS3'] 43428 8404 IGGIGTVPVGR True H1975_Epitope_Rep1 1024.6029286870798 1024.60237496793 37.254 1 -0.31721551736985 0.0833809557825559 0.7796645757343699 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 85662 20739 QGPLLLPGL True PC9_epitope_Rep4 906.5538532363399 906.55274993586 87.938 2 -0.31722117757736223 0.0833809557825559 0.7796705049095429 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000131355|Q9BY15-3|ADGRE3'] 99687 9990 SIGVQSAVI True PC9_epitope_Rep1 872.4967322830398 872.49562993586 43.292 2 -0.31723790477673797 0.08339434632761299 0.7796880274077622 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47'] 58137 5881 LEKNDSQNLP True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 27.607 2 -0.31724294938120884 0.08339434632761299 0.7796933119877735 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.P1892Lfs*5|1|0.23|ENSG00000104237|chr8:54629556-54629556|C/-|frameshift_variant', 'RP1|p.T860Lfs*5|1|0.15|ENSG00000104237|chr8:54626458-54626459|-/ACTTTTGCAA|frameshift_variant'] 113196 15681 TLQDQLNSL True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 65.328 2 -0.31724842904737005 0.08339434632761299 0.7796990523932014 ['ENSG00000242950|ENST00000603053|ERVW-1'] 32143 13247 GEVELVSGVVA True NCI_RA007_Epitope_Rep4 1057.5655401188499 1057.5649749679299 58.085 1 -0.3172875140657191 0.08341071428571428 0.779739999236306 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 45139 19368 IPNIAPDI True PC9_epitope_Rep5 851.47526856247 851.47416993586 79.546 2 -0.31730357192410735 0.08342708165925608 0.7797568230524085 ['nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 30540 6383 GAGQDPHLLG True NCI_RA007_Epitope_Rep4 963.47739382079 963.47628993586 31.156 2 -0.3173182939876531 0.0834434484482697 0.7797722478876653 ['ENST00000569558.5_1_16:90095949-90097840:+|nuORF'] 68523 15473 LTGFVTHTHP True PC9_epitope_Rep1 1108.56654317836 1108.5654499358602 64.338 2 -0.317324247127503 0.08345981465278646 0.7797784853506405 ['ENST00000462630.5_1_20:2637388-2638937:+|nuORF'] 122052 11447 VFWRTRAL True NCI_RA007_Epitope_Rep3 1047.5977837369899 1047.59668993586 52.148 2 -0.317359861740392 0.08347618027283765 0.7798158026610887 ['ENST00000231061.8_1_5:151042294-151042486:-|nuORF'] 46793 16061 ITGGNKTDIL True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 67.034 2 -0.3173926454384214 0.0834910545298718 0.7798501563454469 ['ENSG00000198691|ENST00000370225|ABCA4'] 138725 19024 YIPTELDQV True PC9_epitope_Rep4 1076.53899101784 1076.53847496793 81.267 1 -0.31741554211184914 0.0834910545298718 0.7798741510204379 ['ENSG00000149100|ENST00000531120|EIF3M'] 106201 13643 STDTFLFSKPV True H1975_Epitope_Rep1 1240.63395403184 1240.6328499358601 57.61 2 -0.31742121261073525 0.08350443678694495 0.7798800936363478 ['nc|ENSG00000137185|O15535-2|ZSCAN9'] 7347 4424 ARPSPQVPA True PC9_epitope_Rep1 921.50321464581 921.50210993586 21.901 2 -0.3174453426771719 0.08350443678694495 0.779905382506409 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 65099 16484 LQLWQERERRQ True NCI_RA007_Epitope_Rep1 1540.8222573504 1540.82116993586 68.234 2 -0.3174521807691595 0.08350443678694495 0.7799125492346008 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF', 'ENST00000498539.1_1_7:100174858-100175272:-|nuORF'] 89197 14945 QVSQIYQSI True PC9_epitope_Rep4 1064.55022440788 1064.54912993586 65.426 2 -0.3175875271879141 0.08351930870721823 0.7800544230045796 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF', 'ENST00000462527.2_1_10:120819077-120819266:-|nuORF'] 12372 4530 DISENQREI True H1975_Epitope_Rep3 1102.52546621202 1102.52436993586 22.546 2 -0.31759830871859956 0.08351930870721823 0.780065726352547 ['ENST00000519677.1_1_5:78296041-78296494:-|nuORF'] 45936 8398 ISEIKDEEEDS True H1975_Epitope_Rep3 1292.56197086004 1292.5608699358602 37.286 2 -0.3176917476992838 0.08360559155910235 0.7801636991977465 ['ENST00000326105.6_1_1:175013764-175014370:-|nuORF'] 86205 9906 QIIKGSKDV True PC9_epitope_Rep2 986.5760452328999 986.57494993586 43.434 2 -0.3177451325367458 0.08360559155910235 0.7802196836463838 ['ENSG00000044459|ENST00000380647|CNTLN', 'nc|ENSG00000044459|Q9NXG0|CNTLN'] 90737 5063 RERLEQQVP True NCI_RA007_Epitope_Rep4 1153.62036965637 1153.61872490379 25.976 3 -0.3178445377469327 0.08363980433463063 0.7803239474385477 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 60197 19947 LGPKVLLFL True PC9_epitope_Rep6 998.6528390016199 998.65174993586 89.386 2 -0.3178647176748529 0.08365616352762653 0.7803451165511975 ['ENST00000538107.5_1_12:8804361-8814700:-|nuORF', 'ENST00000537128.1_1_12:8806991-8814700:-|nuORF', 'ENST00000534833.5_1_12:8803096-8814700:-|nuORF', 'nc|ENSG00000197614|Q13361-2|MFAP5', 'ENSG00000197614|ENST00000359478|MFAP5'] 41665 10777 IAGEAPGV True H1975_Epitope_Rep2 712.3755545211999 712.3750049679301 46.483 1 -0.3179347160411747 0.08372159445902283 0.7804185536052876 ['ENSG00000132881|ENST00000375599|CPLANE2'] 41984 6064 IDETLDVK True H1975_Epitope_Rep3 931.4862271689899 931.48512993586 28.336 2 -0.31796242673301783 0.08372159445902283 0.78044762880755 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'nc|ENSG00000084234|Q06481-6|APLP2', 'ENST00000525604.1_1_11:130011383-130011476:+|nuORF', 'ENST00000533860.5_1_11:130009456-130013340:+|nuORF'] 8562 8441 ATVLGTEIVA True H1975_Epitope_Rep3 972.54916177872 972.54806993586 37.454 2 -0.31797274287243643 0.08372159445902283 0.7804584533932947 ['ENSG00000164002|ENST00000415550|EXO5'] 80290 14089 PGEQRRNDI True PC9_epitope_Rep6 1083.54211933567 1083.54102993586 66.067 2 -0.31799525430952286 0.08372159445902283 0.7804820752188179 ['nc|ENSG00000078043|O75928-2|PIAS2'] 94316 20041 RRRKKRRREEE True NCI_RA007_Epitope_Rep3 1597.93493611721 1597.93382993586 87.332 2 -0.31813252248310314 0.08373197201199487 0.7806261403257793 ['ENST00000235307.6_1_1:184356289-184446531:+|nuORF'] 140130 13853 YQQQQSLAL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 61.186 2 -0.3181359160405161 0.08373197201199487 0.7806297024865304 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 70341 5421 LVSLESAERP True NCI_RA007_Epitope_Rep1 1099.5873381925899 1099.58624993586 25.159 2 -0.3181455631529398 0.08373197201199487 0.7806398290500081 ['OTOGL|p.K1789Rfs*16|1|0.85|ENSG00000165899|chr12:80353341-80353341|G/-|frameshift_variant', 'ENSG00000165899|ENST00000547103|OTOGL'] 6468 9600 APSGNYVAC True PC9_epitope_Rep1 880.3749028981999 880.37435496793 41.782 1 -0.31815217769349097 0.08373197201199487 0.7806467724544113 ['ENSG00000114450|ENST00000232564|GNB4'] 60234 4759 LGQLGEAVKR True NCI_RA007_Epitope_Rep5 1069.62439240765 1069.6232899358602 24.989 2 -0.31819135220541744 0.08373197201199487 0.7806878967983752 ['ENSG00000179954|ENST00000389623|SSC5D'] 55568 16747 LAGYFPCMNSL True PC9_epitope_Rep2 1214.5464019807398 1214.54476490379 69.663 3 -0.3182800728030447 0.0837483266398929 0.7807810468406955 ['nc|ENSG00000176406|Q9UQ26-7|RIMS2'] 63918 10867 LNQQSYST True NCI_RA007_Epitope_Rep1 939.4297749220299 939.42866993586 46.261 2 -0.31833670861720587 0.08377654827770838 0.7808405200898791 ['ENST00000453627.1_1_7:32919436-32933460:-|nuORF'] 121027 11125 VEQGREQTL True PC9_epitope_Rep3 1058.5356369729 1058.53452993586 47.791 2 -0.3183612616579606 0.08377654827770838 0.7808663056170857 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000529299.2_1_1:110170417-110171118:+|nuORF'] 67347 11279 LSSGHSSYAI True PC9_epitope_Rep6 1020.4876241513199 1020.48652993586 54.397 2 -0.31837684190672944 0.08377654827770838 0.7808826686953776 ['nc|ENSG00000211637|A0A075B6H9|IGLV4-69'] 68699 8369 LTKM[Oxidation]EQQQLE True NCI_RA007_Epitope_Rep1 1262.6176527251398 1262.6165499358601 36.556 2 -0.3183920021577964 0.08377654827770838 0.7808985912319233 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS', 'nc|ENSG00000119969|Q9NRZ9-6|HELLS', 'nc|ENSG00000119969|Q9NRZ9-5|HELLS', 'ENST00000462057.2_1_10:96313888-96330576:+|nuORF', 'nc|ENSG00000119969|Q9NRZ9-9|HELLS', 'nc|ENSG00000119969|Q9NRZ9-8|HELLS', 'nc|ENSG00000119969|Q9NRZ9-7|HELLS'] 94325 2615 RRRKRKKRK True NCI_RA007_Epitope_Rep4 1310.8959718576996 1310.89432490379 14.68 3 -0.31843411774850333 0.08377654827770838 0.7809428273659724 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 2796 8944 AEVCLWESQGQ True NCI_RA007_Epitope_Rep5 1248.54448740444 1248.54283490379 41.063 3 -0.31859172970251204 0.08381074762185219 0.7811084129856928 ['ENST00000490549.1_1_10:25883203-25888200:+|nuORF', 'ENSG00000151025|ENST00000376351|GPR158'] 141227 16390 YTCERNDQL True PC9_epitope_Rep3 1140.48697252832 1140.4858699358601 68.182 2 -0.3187134767767642 0.08389549202270051 0.7812363602522613 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 79727 5119 PDWKKRWLYWK True NCI_RA007_Epitope_Rep2 1604.86160298124 1604.85941987172 24.536 4 -0.31871855012216993 0.08389549202270051 0.7812416927432118 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1'] 99201 13879 SHLGSKYNSL True PC9_epitope_Rep1 1104.5563724174801 1104.55526993586 58.224 2 -0.31875600568244244 0.08389549202270051 0.7812810634503563 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.D4010Y|1|0.28|ENSG00000186472|chr7:82915958-82915958|C/A|missense_variant'] 103547 8017 SPSATVVSA True PC9_epitope_Rep3 817.41814760917 817.41704993586 35.814 2 -0.31881588555252693 0.0839118408137771 0.7813440120925516 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 91122 12345 RFVEKYTEL True PC9_epitope_Rep2 1183.62372370131 1183.62208490379 52.795 3 -0.3189846735619204 0.08392818902134343 0.7815214970171424 ['ENSG00000181610|ENST00000313608|MRPS23'] 3034 8594 AFQGPREAD True PC9_epitope_Rep1 989.4566583762098 989.45556993586 37.892 2 -0.3190094772486573 0.08394004282655246 0.7815475845543034 ['ENSG00000206530|ENST00000393845|CFAP44'] 15928 17133 EDLRLTSTTF True PC9_epitope_Rep5 1181.59281749585 1181.59172993586 70.924 2 -0.31904415091118177 0.08394004282655246 0.7815840554469853 ['SORCS1|p.E157D|1|0.06|ENSG00000108018|chr10:107164056-107164056|C/G|missense_variant'] 88725 18647 QTIALITYL True H1975_Epitope_Rep2 1034.60119735158 1034.60067496793 77.389 1 -0.3190886302565623 0.08394004282655246 0.781630844557484 ['ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 84496 21830 QALSPLLSV True PC9_epitope_Rep1 926.5436824754601 926.5431349679301 88.778 1 -0.3190971204315062 0.08394004282655246 0.7816397761651993 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 115683 17482 TSAESFVNV True PC9_epitope_Rep3 952.45017601344 952.44906993586 72.422 2 -0.31915939158709566 0.08395489097462618 0.7817052903716442 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 36499 12577 GVGLSSYL True H1975_Epitope_Rep2 794.4174193331801 794.4168749679301 53.472 1 -0.3192617781713588 0.08395489097462618 0.7818130297447272 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 82501 5591 PPRPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 26.334 2 -0.3193225198564163 0.08396524345638481 0.7818769591105197 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 113688 6042 TLYEHNNEL True PC9_epitope_Rep5 1131.51965255559 1131.5179949037902 28.233 3 -0.3193651641271968 0.08396524345638481 0.7819218467115109 ['nc|ENSG00000094914|Q9NRG9-2|AAAS', 'ENSG00000094914|ENST00000209873|AAAS', 'ENST00000548880.1_1_12:53709415-53715282:-|nuORF'] 86388 17977 QKENPLTL True PC9_epitope_Rep4 941.5181960036099 941.51708993586 77.201 2 -0.3194150757548186 0.08396524345638481 0.7819743896260312 ['C7|p.Q697L|1|0.31|ENSG00000112936|chr5:40976765-40976765|A/T|missense_variant'] 68686 14641 LTKEYDRLLEE True H1975_Epitope_Rep3 1407.7245599413898 1407.72346993586 61.683 2 -0.31943809705414716 0.08396524345638481 0.781998626639351 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 67485 5647 LSSSYGREKER True NCI_RA007_Epitope_Rep2 1310.6578773638998 1310.6562449037901 26.58 3 -0.319490903132647 0.08396524345638481 0.7820542262207161 ['ENST00000454175.1_1_7:99103050-99103296:+|nuORF'] 58362 4920 LENHDLQQRVE True NCI_RA007_Epitope_Rep2 1379.67934108447 1379.67769490379 23.757 3 -0.31974448751437223 0.08403361344537816 0.7823213209958912 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 73572 10021 MVTSASTY True PC9_epitope_Rep5 858.3793195723001 858.37822993586 43.525 2 -0.31974680260092664 0.08403361344537816 0.7823237601552487 ['CLCA4|p.T58S|1|0.28|ENSG00000016602|chr1:86559944-86559944|A/T|missense_variant'] 89843 19920 RARHRRRPRL True NCI_RA007_Epitope_Rep5 1372.8500842944397 1372.8489899358601 83.536 2 -0.3198047504257737 0.08408563782337199 0.7823848179058975 ['ENST00000405135.5_1_22:50969739-50970123:-|nuORF'] 127655 9172 VPAGGAVAV True PC9_epitope_Rep4 739.42283906679 739.42229496793 42.875 1 -0.3198959615890838 0.08411981945014362 0.7824809410133582 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 17581 14905 EHIFKWIT True PC9_epitope_Rep6 1072.57056592964 1072.56946993586 69.323 2 -0.31991227923251514 0.08413165640888413 0.7824981395788482 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 131315 7210 VTGIAGLSAGV True NCI_RA007_Epitope_Rep5 943.53384606775 943.53274993586 34.411 2 -0.31994421066564277 0.08413165640888413 0.7825317967722764 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 39690 5121 HLSEQCCNT True H1975_Epitope_Rep2 1033.39571499577 1033.3946099358602 24.773 2 -0.3199560366820199 0.08413165640888413 0.782544262578718 ['NLRP4|p.E797Nfs*16|1|0.56|ENSG00000160505|chr19:55870861-55870861|G/-|frameshift_variant'] 14221 20517 DSGDLVLLNV True PC9_epitope_Rep1 1043.54989005471 1043.5487899358602 83.729 2 -0.3199768545471557 0.08413165640888413 0.7825662075403763 ['KIF17|p.W795L|1|0.25|ENSG00000117245|chr1:20682732-20682732|C/A|missense_variant'] 86585 5313 QLEEAEEEAQR True NCI_RA007_Epitope_Rep1 1330.60008770426 1330.59844490379 24.747 3 -0.31999327391011023 0.08414799486228057 0.7825835166223459 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 101977 10328 SLQIAYEVP True NCI_RA007_Epitope_Rep3 1018.5335117145798 1018.53240993586 47.689 2 -0.3200644626977551 0.08418217171807267 0.7826585707016084 ['ENSG00000198018|ENST00000370489|ENTPD7'] 140448 25540 YRHRRKYF True H1975_Epitope_Rep2 1224.6628436050398 1224.6617499358601 104.87 2 -0.32009202490227273 0.08419700672505753 0.7826876328290632 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 57167 11577 LDTVCRTSQ True H1975_Epitope_Rep3 1021.4862442523299 1021.48514993586 49.66 2 -0.320094909290017 0.08419700672505753 0.7826906742935864 ['ENST00000490021.2_1_1:110230443-110251195:+|nuORF'] 16753 6194 EETGSQENQPQ True NCI_RA007_Epitope_Rep1 1245.51093834669 1245.50984993586 28.129 2 -0.32024008423265476 0.08426685693899394 0.7828437820050475 ['CHGB|p.H249Q|1|0.55|ENSG00000089199|chr20:5922891-5922891|C/A|missense_variant'] 36432 18373 GVGAGVFIL True NCI_RA007_Epitope_Rep3 831.48543932335 831.48489496793 80.456 1 -0.320316765899213 0.08428319152351903 0.782924675108003 ['ENSG00000150433|ENST00000682305|TMEM218', 'ENST00000527257.1_1_11:124972023-124972236:-|nuORF'] 110883 6705 TGSGTPGPFTK True NCI_RA007_Epitope_Rep5 1048.5189242796 1048.5178299358602 32.463 2 -0.3203419744728796 0.08429501471506287 0.7829512713916223 ['ENST00000506427.1_1_1:203188704-203191431:-|nuORF', 'ENST00000484834.5_1_1:203182159-203191449:-|nuORF', 'nc|ENSG00000133063|Q13231-2|CHIT1', 'nc|ENSG00000133063|Q13231-3|CHIT1', 'nc|ENSG00000133063|Q13231-4|CHIT1', 'ENSG00000133063|ENST00000367229|CHIT1'] 121367 8070 VEVPAAAP True H1975_Epitope_Rep2 752.4068546494799 752.40630496793 35.988 1 -0.3203508741766563 0.08429501471506287 0.7829606613983603 ['KCNK10|p.A19E|1|0.41|ENSG00000100433|chr14:88263533-88263533|G/T|missense_variant'] 46817 7346 ITHQQAISI True PC9_epitope_Rep1 1009.5556441414899 1009.55454993586 33.068 2 -0.3203588614618737 0.08429501471506287 0.7829690888893571 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ'] 43590 15287 IGTASGWGL True PC9_epitope_Rep5 860.43921740692 860.43812993586 63.811 2 -0.3203673860839732 0.08429501471506287 0.7829780835089293 ['ENSG00000009724|ENST00000400897|MASP2'] 111346 7847 THPGYYAEL True PC9_epitope_Rep2 1049.48181049489 1049.4807099358602 35.553 2 -0.3203974527991402 0.08431134734063425 0.783009809387783 ['nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B'] 78341 15144 NYKDLNGNVF True PC9_epitope_Rep1 1182.5669371011797 1182.5658499358601 63.074 2 -0.3204280118922914 0.08432767938359463 0.7830420571514467 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 131549 17265 VTLDFILP True PC9_epitope_Rep1 916.52696978216 916.52586993586 71.228 2 -0.32043219909611753 0.08434401084397518 0.783046475920305 ['LYST|p.M1630I|1|0.33|ENSG00000143669|chr1:235782060-235782060|C/A|missense_variant'] 134251 12996 VYNENLVHM True PC9_epitope_Rep4 1117.52262976105 1117.5215299358601 57.883 2 -0.3204568434942663 0.08435432382786724 0.7830724841252426 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 56614 12835 LDIDASGVVGL True NCI_RA007_Epitope_Rep3 1057.5655401188499 1057.56444993586 57.731 2 -0.3204727473652588 0.08435432382786724 0.7830892689218129 ['ENSG00000167196|ENST00000308275|FBXO22'] 38868 3984 HHDSHSSVIL True PC9_epitope_Rep4 1130.5468703629401 1130.54521490379 21.553 3 -0.32047623707741263 0.08435432382786724 0.7830929520168735 ['ENSG00000129315|ENST00000261900|CCNT1'] 92626 13216 RNDGIALQI True PC9_epitope_Rep4 998.5508931142199 998.5503449679301 58.732 1 -0.3205341677758897 0.08435432382786724 0.7831540974531312 ['ENST00000514109.1_1_4:68567136-68586253:+|nuORF', 'ENST00000498917.2_1_4:68567013-68586253:+|nuORF'] 65993 5180 LSEAETLTH True NCI_RA007_Epitope_Rep2 999.4872897981502 999.48618993586 24.77 2 -0.32054816842532186 0.08435432382786724 0.7831688763126279 ['ENST00000560323.1_1_15:48607144-48623929:-|nuORF'] 72970 17810 MQGPPLLTAA True PC9_epitope_Rep6 997.52665251233 997.52554993586 81.138 2 -0.32060570994452053 0.0843706530655919 0.7832296214280643 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.S985Afs*9|1|0.23|ENSG00000156535|chr6:73803291-73803291|G/-|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 8492 11202 ATRWLRQYRPR True PC9_epitope_Rep1 1501.83784784489 1501.83619490379 47.97 3 -0.32067274806891544 0.08438397203844714 0.7833004024658871 ['ENSG00000145217|ENST00000398516|SLC26A1', 'nc|ENSG00000145217|Q9H2B4-2|SLC26A1'] 73710 7974 MYRRWWEQFVQ True PC9_epitope_Rep6 1627.77180200067 1627.7701649037901 40.131 3 -0.3206876405118488 0.08438397203844714 0.7833161279433336 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 13578 16384 DPEIITLERR True PC9_epitope_Rep1 1240.67755017932 1240.67644993586 67.843 2 -0.32069478284782027 0.08438397203844714 0.7833236699983791 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-3|DNAJC10'] 133455 12811 VVYGGGAAEI True PC9_epitope_Rep6 934.4759968384599 934.47488993586 60.781 2 -0.3207473491605283 0.08443295292439372 0.783379182167017 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 44674 5803 ILSVVQEVK True NCI_RA007_Epitope_Rep2 1013.6120963884499 1013.61098993586 27.191 2 -0.32075139325305113 0.08443295292439372 0.7833834531851441 ['ENST00000238497.9_1_18:61067292-61067792:-|nuORF'] 26994 19382 FLELVDYILEK True PC9_epitope_Rep5 1380.7540691645197 1380.75241490379 79.598 3 -0.32077984913356244 0.08443295292439372 0.7834135069854933 ['ENSG00000182810|ENST00000332395|DDX28'] 142237 18040 YWMHVQNTF True PC9_epitope_Rep4 1224.53861417836 1224.53750993586 77.457 2 -0.3208290580474899 0.08444476142928464 0.7834654840671837 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 120223 8124 VEASDQIRK True NCI_RA007_Epitope_Rep1 1044.55637241748 1044.55526993586 35.598 2 -0.32084213468185907 0.08444476142928464 0.783479297346544 ['ENSG00000242550|ENST00000238508|SERPINB10'] 619 8190 AASEQSETVQP True NCI_RA007_Epitope_Rep5 1145.5200464784098 1145.51894993586 38.185 2 -0.3208882672058176 0.08444476142928464 0.7835280321421481 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16', 'nc|ENSG00000172349|Q14005-3|IL16'] 77170 7210 NRQTWRWHQYR True NCI_RA007_Epitope_Rep1 1629.80252496533 1629.80086490379 32.035 3 -0.32089528838023157 0.08444476142928464 0.7835354498486797 ['ENSG00000186143|ENST00000335524|PRR30'] 20025 9074 ELYRRLEARQR True PC9_epitope_Rep2 1488.8273427308397 1488.82570490379 40.247 3 -0.32092267918716233 0.08445957993082052 0.7835643888022347 ['KIF18B|p.Q145R|1|0.08|ENSG00000186185|chr17:44935296-44935296|T/C|missense_variant'] 12326 5646 DIQLLTHNDP True H1975_Epitope_Rep2 1164.5775017848803 1164.57640993586 26.718 2 -0.32095984133930433 0.08445957993082052 0.7836036544574081 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 22545 5678 ETHRTRYERQD True NCI_RA007_Epitope_Rep1 1489.7022017873699 1489.70056490379 26.145 3 -0.3209767467243905 0.0844743973755527 0.7836215179162556 ['ENST00000481546.1_1_21:46194457-46194526:-|nuORF'] 118864 10086 VAATRPQLTTG True PC9_epitope_Rep6 1113.61422164677 1113.6131299358601 49.397 2 -0.3210258651117043 0.0844743973755527 0.7836734241375757 ['ENST00000443602.2_1:149673167-149673347:+|nuORF'] 117500 18456 TVRLWDVL True PC9_epitope_Rep2 1000.5705659296399 1000.56946993586 76.324 2 -0.32109692021576547 0.08450402909505812 0.783748523122754 ['nc|ENSG00000148835|Q15542-2|TAF5', 'ENSG00000148835|ENST00000369839|TAF5'] 27563 14197 FNGLFSRLRD True PC9_epitope_Rep1 1223.64110510095 1223.64000993586 59.431 2 -0.32111349664695427 0.08450402909505812 0.7837660448197807 ['ENST00000471717.1_1_7:99772169-99774834:-|nuORF', 'GPC2|p.S268Hfs*34|1|0.07|ENSG00000213420|chr7:100173926-100173926|G/-|frameshift_variant', 'ENSG00000213420|ENST00000292377|GPC2'] 1022 4990 AEAEEGAR True H1975_Epitope_Rep3 831.3722600459099 831.3711699358599 24.323 2 -0.32111912528962694 0.08450402909505812 0.7837719945950651 ['ENST00000464203.1_1_1:156391519-156391591:-|nuORF'] 75767 14560 NLLQQYKTL True PC9_epitope_Rep4 1119.62880908175 1119.6277099358601 63.92 2 -0.32118066370043996 0.08450402909505812 0.7838370493042603 ['nc|ENSG00000155755|Q96Q45-4|TMEM237', 'nc|ENSG00000155755|Q96Q45-2|TMEM237', 'ENSG00000155755|ENST00000409883|TMEM237', 'nc|ENSG00000155755|Q96Q45-5|TMEM237', 'nc|ENSG00000155755|Q96Q45-3|TMEM237'] 105239 13154 SRKEAVLL True PC9_epitope_Rep6 914.5549158654999 914.55380993586 62.238 2 -0.3211949124215915 0.08452035013281514 0.7838521135892921 ['ENST00000552973.1_1_13:52722507-52730359:-|nuORF', 'NEK3|p.P223Rfs*11|1|0.46|ENSG00000136098|chr13:52144827-52144827|G/-|frameshift_variant', 'nc|ENSG00000136098|P51956-2|NEK3', 'ENSG00000136098|ENST00000610828|NEK3'] 5682 9308 APAGPALAQ True PC9_epitope_Rep5 794.42865272322 794.42754993586 40.756 2 -0.3212061051548811 0.08453516356181477 0.7838639473365415 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 68644 20431 LTIGKCIYLF True PC9_epitope_Rep3 1169.65185302545 1169.6507499358602 83.842 2 -0.3212787573013261 0.08453516356181477 0.7839407681859667 ['ENST00000485996.1_1_14:21944657-21945031:-|nuORF'] 70649 25788 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 104.92 3 -0.3213139497688099 0.08454545454545455 0.7839779848720417 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 96635 19014 SAIETLVTA True PC9_epitope_Rep5 903.49131254943 903.49020993586 78.163 2 -0.3213162671393398 0.08454545454545455 0.7839804356469182 ['nc|ENSG00000111605|Q16630-3|CPSF6', 'ENSG00000111605|ENST00000435070|CPSF6', 'nc|ENSG00000111605|Q16630-2|CPSF6'] 100261 10586 SIYGMFVIV True H1975_Epitope_Rep3 1027.5412399473098 1027.5401499358602 45.788 2 -0.32132180837819396 0.08454545454545455 0.7839862959353793 ['ENSG00000176893|ENST00000641926|OR51G2'] 125731 22693 VKRRRRWYFRV True PC9_epitope_Rep1 1620.9589660370798 1620.9578699358601 92.094 2 -0.32132349756987927 0.08454545454545455 0.7839880824020049 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 45386 2653 IQEEKENTEQR True NCI_RA007_Epitope_Rep5 1402.6688359704199 1402.66720490379 14.894 3 -0.3213247713793858 0.08454545454545455 0.7839894295708646 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1', 'ENST00000526262.5_1_11:70189825-70228249:+|nuORF', 'ENST00000532504.5_1_11:70185286-70228249:+|nuORF'] 63531 12518 LLYVGSNDIQY True H1975_Epitope_Rep1 1283.63976768827 1283.6386699358602 53.193 2 -0.32138720314413427 0.08456177251742393 0.784055461973221 ['CNR1|p.A342Pfs*6|1|0.25|ENSG00000118432|chr6:88144252-88144252|T/-|frameshift_variant', 'ENSG00000118432|ENST00000369501|CNR1'] 81492 12669 PLGPSPLAS True PC9_epitope_Rep2 837.45961849833 837.45852993586 54.038 2 -0.32141678288691805 0.08457507486097247 0.7840867512075866 ['ENST00000473583.1_1_3:52324300-52324483:+|nuORF'] 38249 10739 HEDVNVGSI True PC9_epitope_Rep4 968.45632402304 968.45522993586 49.064 2 -0.32148279775483335 0.08457507486097247 0.7841565894566259 ['ENSG00000133302|ENST00000265140|SLF1'] 37190 10489 GVQSYESSV True PC9_epitope_Rep5 954.42944056886 954.42834993586 45.332 2 -0.32152352381539506 0.08457507486097247 0.7841996799084574 ['ENSG00000257446|ENST00000547628|ZNF878'] 58339 7204 LENALQKA True H1975_Epitope_Rep3 885.49198125577 885.49088993586 32.685 2 -0.32154673803321415 0.08458988343492675 0.7842242437858925 ['CON__Q0VBK2'] 46296 12939 ISQCEQYAK True PC9_epitope_Rep1 1068.4909952796 1068.4898899358602 54.642 2 -0.32155061111729794 0.08458988343492675 0.7842283421854728 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A'] 76307 12521 NPQDVVQAI True PC9_epitope_Rep3 982.5083595958998 982.50726993586 53.187 2 -0.321572989859701 0.08460619887001622 0.7842520235713947 ['ENSG00000080511|ENST00000591589|RDH8'] 5934 9985 APGSDPESSL True PC9_epitope_Rep2 958.42435518842 958.42324993586 43.737 2 -0.32168617642692304 0.08464033649390461 0.7843718186708081 ['CON__Q2HJF0'] 64687 20900 LPVPTALTV True PC9_epitope_Rep3 909.55351888317 909.55242993586 85.667 2 -0.3217304293746348 0.08465514168597398 0.7844186645034458 ['nc|ENSG00000125319|Q8N3J3-3|HROB', 'ENSG00000125319|ENST00000585683|HROB', 'nc|ENSG00000125319|Q8N3J3|HROB'] 126795 19352 VLPNRPFGLF True PC9_epitope_Rep1 1158.6549642599398 1158.65386993586 79.242 2 -0.32173605974374975 0.08465514168597398 0.784424625137608 ['ENSG00000005187|ENST00000289416|ACSM3'] 84752 17347 QDTDWKELY True H1975_Epitope_Rep3 1196.5349682665599 1196.5338699358601 72.378 2 -0.32186630815222944 0.08467145479496 0.7845625368856824 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 22960 4476 EVEPCKFAGP True NCI_RA007_Epitope_Rep3 1075.50083168731 1075.4997299358602 24.422 2 -0.3218781582790962 0.08468776732249786 0.7845750864464411 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENST00000591632.5_1_18:60191431-60230292:+|nuORF'] 136759 17150 WYQRWLVRF True NCI_RA007_Epitope_Rep3 1352.7142104715597 1352.71310993586 75.342 2 -0.3219052442990126 0.08472039063335353 0.7846037725633835 ['ENSG00000185518|ENST00000394232|SV2B', 'nc|ENSG00000185518|Q7L1I2-2|SV2B'] 70809 9293 LYAQRRWQK True NCI_RA007_Epitope_Rep2 1247.6887239997097 1247.68762993586 40.758 2 -0.32192778300807 0.08472039063335353 0.7846276442137999 ['nc|ENSG00000148219|O75129-2|ASTN2', 'nc|ENSG00000148219|O75129-3|ASTN2', 'ENSG00000148219|ENST00000313400|ASTN2', 'ASTN2|p.V225M|1|0.33|ENSG00000148219|chr9:117214700-117214700|C/T|missense_variant'] 11956 4222 DHNDGLGNAF True NCI_RA007_Epitope_Rep5 1058.44173658806 1058.4406299358602 22.778 2 -0.3219954060793337 0.08478865207783877 0.7846992745701031 ['ENSG00000271447|ENST00000605424|MMP28'] 125856 17449 VLAHYADVL True PC9_epitope_Rep1 999.5389314481899 999.53782993586 71.915 2 -0.3220439812551686 0.08478865207783877 0.784750735731766 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 109287 23151 TAVLISEIL True PC9_epitope_Rep3 957.57464825057 957.57354993586 94.32 2 -0.3220852551850573 0.08482278097546198 0.7847944667708487 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant'] 2645 5110 AESKVSVAV True H1975_Epitope_Rep1 888.4916469025999 888.49054993586 24.725 2 -0.32220723578353905 0.08489254784561104 0.7849237355115117 ['ENSG00000139218|ENST00000369367|SCAF11', 'nc|ENSG00000139218|Q99590-2|SCAF11', 'ENST00000550629.1_1_12:46313059-46318516:-|nuORF'] 124150 13391 VGSSAVTTLGD True PC9_epitope_Rep2 1005.49785448185 1005.49674993586 56.789 2 -0.3223425520136552 0.08496231222936973 0.7850671829983683 ['ENST00000527124.1_1_10:5754860-5756196:+|nuORF'] 125406 10377 VISPPLSVIVP True H1975_Epitope_Rep2 1119.69034670915 1119.68924993586 44.926 2 -0.322447334983942 0.08497710304520589 0.7851782960553703 ['ENSG00000204186|ENST00000374423|ZDBF2'] 107910 12960 SVVSGAVVAA True PC9_epitope_Rep1 858.4810822188999 858.47998993586 54.723 2 -0.3224681688989532 0.08497710304520589 0.7852003920802627 ['ENSG00000204592|ENST00000376630|HLA-E'] 150 9302 AADKGVYII True NCI_RA007_Epitope_Rep3 948.5280324113198 948.52692993586 43.693 2 -0.3225340491264321 0.08499340721998504 0.7852702709667704 ['ENSG00000143653|ENST00000366510|SCCPDH'] 18809 13611 ELDKASYEI True PC9_epitope_Rep1 1066.5182555732601 1066.51714993586 57.21 2 -0.32260452785313726 0.08500668151447661 0.7853450403721496 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 18210 4167 EIMKELMENGP True NCI_RA007_Epitope_Rep4 1289.5995597524097 1289.59792490379 22.327 3 -0.32260543500750644 0.08500668151447661 0.7853460028403287 ['ENST00000480586.1_1_1:32050752-32051478:+|nuORF', 'nc|ENSG00000142910|Q9GZM7-2|TINAGL1', 'ENST00000481165.5_1_1:32050098-32051133:+|nuORF', 'nc|ENSG00000142910|Q9GZM7-3|TINAGL1', 'ENSG00000142910|ENST00000271064|TINAGL1'] 139337 21388 YLLIPLLER True PC9_epitope_Rep4 1128.69068106232 1128.68958993586 90.437 2 -0.3226147120290787 0.08500668151447661 0.7853558456562102 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7'] 27017 15094 FLETRKSWRK True PC9_epitope_Rep1 1349.7568035595298 1349.75515490379 62.878 3 -0.3226658298013338 0.08503928590517933 0.7854100851977113 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 29903 16370 FVWDMCNYVVP True H1975_Epitope_Rep1 1371.59916582959 1371.5980699358602 68.326 2 -0.3226871989305047 0.08503928590517933 0.7854327614304523 ['ENSG00000165029|ENST00000374736|ABCA1'] 133652 9929 VYANGIRNI True PC9_epitope_Rep2 1018.5559784946599 1018.55488993586 43.524 2 -0.32276645947952903 0.08510752017673573 0.785516880943358 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 13074 16771 DLPSAEELEDW True NCI_RA007_Epitope_Rep3 1302.56157693722 1302.56046993586 73.817 2 -0.32277391923414944 0.08510752017673573 0.7855247988826264 ['ENSG00000143318|ENST00000368078|CASQ1'] 13642 8594 DPNDASTLK True PC9_epitope_Rep3 959.4559896698701 959.45488993586 38.007 2 -0.32283566657783436 0.0851416354890433 0.7855903445850014 ['ENSG00000213759|ENST00000446444|UGT2B11'] 869 11040 ADGHGSIEI True PC9_epitope_Rep2 897.4192102383299 897.41810993586 47.784 2 -0.32285833042210593 0.08517423216703485 0.7856144051760866 ['ENST00000540925.5_1_11:113745483-113746238:-|nuORF'] 103881 8735 SPYVQKPLQGK True H1975_Epitope_Rep3 1243.6924719674696 1243.6913699358602 38.603 2 -0.3228822874996672 0.08517423216703485 0.7856398402152801 ['ENST00000162391.7_1_12:8185724-8186174:+|nuORF'] 121249 13136 VETFAFQA True H1975_Epitope_Rep3 911.4388830537499 911.43778993586 55.775 2 -0.32294544867765657 0.08520682652225033 0.7857069054051565 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'HSP90AA1|p.I34Ffs*26|1|0.12|ENSG00000080824|chr14:102086272-102086279|GTATTGAT/-|frameshift_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 116556 6295 TTVKNSSLL True PC9_epitope_Rep5 961.54441075145 961.54330993586 29.189 2 -0.3229777579180897 0.08520682652225033 0.7857412158810183 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 103116 5265 SPHLGPAPA True PC9_epitope_Rep6 845.4395517600899 845.43844993586 28.039 2 -0.32303222520055563 0.08526745159509093 0.7857990633002793 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.L403Pfs*10|1|0.21|ENSG00000197081|chr6:160033104-160033104|T/-|frameshift_variant', 'IGF2R|p.G526Rfs*30|1|0.15|ENSG00000197081|chr6:160043242-160043245|AGGC/-|frameshift_variant', 'IGF2R|p.E525Kfs*32|1|0.15|ENSG00000197081|chr6:160043239-160043239|G/-|frameshift_variant'] 31489 5116 GEASPPAPP True NCI_RA007_Epitope_Rep3 821.3919328613299 821.39082993586 27.115 2 -0.3230478210304923 0.08526745159509093 0.7858156284663163 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 73444 16334 MVADRFSEL True PC9_epitope_Rep1 1066.5117307241799 1066.5106299358602 67.647 2 -0.32305992578174153 0.08526745159509093 0.7858284860278221 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 101142 6875 SLGRAPSL True NCI_RA007_Epitope_Rep5 799.45520182423 799.45410993586 33.126 2 -0.32310499666988485 0.08526745159509093 0.785876363448391 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G', 'nc|ENSG00000006283|O43497-30|CACNA1G', 'nc|ENSG00000006283|O43497-29|CACNA1G', 'nc|ENSG00000006283|O43497-28|CACNA1G', 'nc|ENSG00000006283|O43497-32|CACNA1G', 'nc|ENSG00000006283|O43497-31|CACNA1G', 'nc|ENSG00000006283|O43497-27|CACNA1G', 'nc|ENSG00000196557|O95180-2|CACNA1H', 'CACNA1H|p.T2226Sfs*36|1|0.19|ENSG00000196557|chr16:1220609-1220609|C/-|frameshift_variant', 'ENSG00000196557|ENST00000348261|CACNA1H'] 49600 18254 KGAAGFSI True PC9_epitope_Rep1 749.4071890026501 749.40608993586 75.003 2 -0.3231243673594419 0.08526745159509093 0.7858969420411049 ['ENSG00000144029|ENST00000272418|MRPS5'] 45508 17778 IQNLVSASL True PC9_epitope_Rep2 943.53384606775 943.53274993586 73.671 2 -0.32316147354200236 0.08526745159509093 0.7859363649270366 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 39977 8846 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.44828993586 43.959 2 -0.3231639470801151 0.08526745159509093 0.7859389930329381 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 49557 22054 KFLLRLCVDA True PC9_epitope_Rep3 1176.66890007192 1176.66780993586 90.127 2 -0.32321034202991056 0.08529851809632374 0.7859882902376538 ['ENST00000405995.5_1_9:134375044-134375179:+|nuORF'] 58989 5043 LEVERQENE True NCI_RA007_Epitope_Rep2 1144.53603089572 1144.5349299358602 24.24 2 -0.32321986083858173 0.08529851809632374 0.7859984052278983 ['ENST00000554641.1_1_14:61278722-61346563:+|nuORF', 'nc|ENSG00000020426|P51948-2|MNAT1', 'ENSG00000020426|ENST00000261245|MNAT1'] 30920 6644 GAQSLQREL True NCI_RA007_Epitope_Rep3 1000.53015766964 1000.52906993586 33.201 2 -0.3232283813609764 0.08529851809632374 0.7860074596177994 ['ENST00000479606.5_1_22:21351676-21351817:+|nuORF'] 55366 8754 LAENYHNRWGR True NCI_RA007_Epitope_Rep2 1414.68542952442 1414.6837949037902 38.697 3 -0.3232571063969763 0.0853280615516136 0.7860379859349406 ['RYR1|p.T2885R|1|0.13|ENSG00000196218|chr19:38506508-38506508|C/G|missense_variant'] 62967 13153 LLPHVVPGTT True PC9_epitope_Rep4 1032.59678067748 1032.59568993586 58.489 2 -0.32327910214693323 0.0853280615516136 0.7860613625177328 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 697 12651 AAVDAGMAM True PC9_epitope_Rep4 835.35681030591 835.35570993586 56.502 2 -0.32331706741295824 0.0853280615516136 0.7861017142631131 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 67721 15428 LSWRSRALP True PC9_epitope_Rep3 1084.61416207712 1084.61306993586 64.499 2 -0.3233184655071606 0.0853280615516136 0.7861032003164516 ['ENST00000287652.8_1_3:10290066-10290432:+|nuORF'] 32464 4587 GGASEKGR True H1975_Epitope_Rep1 760.38276515996 760.38166993586 22.672 2 -0.32334674168506317 0.0853443516358261 0.7861332566033596 ['ENST00000556478.2_1_14:51054573-51054639:+|nuORF'] 64431 21550 LPNMAEFDTI True PC9_epitope_Rep3 1149.53761111885 1149.53650993586 88.187 2 -0.3234474037910526 0.08537693006357856 0.7862402736848876 ['nc|ENSG00000204116|Q5VXU3-2|CHIC1', 'ENSG00000204116|ENST00000373502|CHIC1'] 16169 10752 EEDSKSEFIL True H1975_Epitope_Rep1 1195.56084866123 1195.55920490379 46.319 3 -0.3234624972024482 0.08537693006357856 0.7862563223767257 ['ENSG00000092148|ENST00000399332|HECTD1'] 100473 12765 SLANNVTSV True PC9_epitope_Rep1 903.46616043075 903.46506993586 53.975 2 -0.3235035863100136 0.0853932184071805 0.7863000152489769 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2'] 128891 7420 VQFAAEYRR True PC9_epitope_Rep5 1138.5883412520998 1138.58668490379 33.497 3 -0.32351789693629346 0.08540950617064093 0.7863152338160219 ['ENST00000333017.6_1_2:99863168-99871557:-|nuORF'] 61244 16310 LINIRVELS True PC9_epitope_Rep4 1055.63389446219 1055.63278993586 70.697 2 -0.3235890162543553 0.08542579335399081 0.7863908737123634 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 12188 18916 DIFHVSTL True PC9_epitope_Rep4 930.4810822188999 930.47998993586 80.847 2 -0.3236614096802332 0.08545943347517225 0.786467883084464 ['RND3|p.A193S|1|0.08|ENSG00000115963|chr2:150470145-150470145|C/A|missense_variant'] 80534 14558 PGPLLRFLSF True PC9_epitope_Rep3 1145.65971528721 1145.65807490379 61.124 3 -0.3236649347150154 0.08545943347517225 0.7864716332533047 ['ENST00000370384.7_1_6:74019690-74019876:-|nuORF'] 2998 17937 AFIEKHWTF True PC9_epitope_Rep5 1177.59202965021 1177.5903749037902 74.013 3 -0.32370141655317386 0.08545943347517225 0.7865104471091316 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 86930 4245 QLTVHHRPPQ True NCI_RA007_Epitope_Rep2 1211.65233849099 1211.65069490379 21.151 3 -0.323705672982229 0.08545943347517225 0.7865149758613444 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP'] 46887 7932 ITLLEQGKEPC True H1975_Epitope_Rep3 1229.6325741328499 1229.6314699358602 35.48 2 -0.3237197962096996 0.08545943347517225 0.7865300030429108 ['ENSG00000171817|ENST00000316433|ZNF540'] 14699 6449 DVKADNLSSD True PC9_epitope_Rep3 1062.4829326937001 1062.48182993586 29.832 2 -0.3237365120171809 0.08545943347517225 0.7865477894582202 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 73702 6718 MYRRWWEQFVQ True NCI_RA007_Epitope_Rep5 1627.77180200067 1627.7701649037901 32.513 3 -0.32376427900338706 0.08545943347517225 0.786577336571057 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 29256 8722 FTYTPGTR True NCI_RA007_Epitope_Rep1 941.4606811274899 941.45958993586 37.928 2 -0.32377845335703914 0.08545943347517225 0.7865924204618069 ['nc|ENSG00000072736|Q12968-5|NFATC3'] 30469 18846 GAFYMFYF True PC9_epitope_Rep3 1044.44152590604 1044.44042993586 77.713 2 -0.3238098652858298 0.08545943347517225 0.786625850018024 ['ENST00000556431.1_1_14:105225902-105225959:+|nuORF'] 121072 10268 VEQWPYRAVA True H1975_Epitope_Rep2 1217.61930702721 1217.61820993586 44.503 2 -0.32381131143613356 0.08545943347517225 0.7866273891225343 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3', 'CCT3|p.Q442H|1|0.1|ENSG00000163468|chr1:156311025-156311025|C/A|missense_variant'] 61380 18209 LITEELVP True PC9_epitope_Rep1 912.5167990212799 912.51570993586 74.833 2 -0.32381526571660024 0.08545943347517225 0.7866315976020417 ['SLC1A3|p.R226L|1|0.23|ENSG00000079215|chr5:36677001-36677001|G/T|missense_variant'] 128256 6130 VPPFLKGVP True H1975_Epitope_Rep1 952.5745886809199 952.57348993586 28.649 2 -0.3238262772554027 0.08545943347517225 0.7866433172419685 ['ENST00000368321.7_1_1:155883759-155883837:-|nuORF'] 134210 17331 VYLWLSFL True PC9_epitope_Rep6 1039.5742543277497 1039.57314993586 79.277 2 -0.3238333724992833 0.08545943347517225 0.786650868927179 ['ENSG00000234719|ENST00000399147|NPIPB2'] 3310 12144 AGGFVYTY True H1975_Epitope_Rep2 876.40176926904 876.40122496793 51.796 1 -0.3238737525263348 0.08547267224497063 0.7866938492985239 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 102375 11420 SLTELSLIQ True H1975_Epitope_Rep1 1002.55972646242 1002.5591749679301 48.907 1 -0.3238848721638861 0.08547267224497063 0.7867056858039154 ['TLR8|p.T750Nfs*8|1|0.13|ENSG00000101916|chrX:12921283-12921284|-/A|frameshift_variant', 'ENSG00000101916|ENST00000218032|TLR8', 'nc|ENSG00000101916|Q9NR97-2|TLR8', 'TLR8|p.Q288Nfs*5|1|0.05|ENSG00000101916|chrX:12919900-12919900|C/-|frameshift_variant'] 103583 5825 SPSPPQAEA True PC9_epitope_Rep5 882.4083112014599 882.40720993586 27.398 2 -0.3239040811455558 0.08547267224497063 0.7867261339755965 ['ENSG00000160410|ENST00000291842|SHKBP1'] 127245 17230 VLYCLAFVL True PC9_epitope_Rep6 1039.5776254560299 1039.5765299358602 78.871 2 -0.3239974912954679 0.08548743146051413 0.7868255848059093 ['ENSG00000183671|ENST00000621141|CMKLR2'] 68826 15134 LTLSPLEQEL True PC9_epitope_Rep5 1141.62305499497 1141.6219499358601 63.218 2 -0.3240381282775176 0.08548743146051413 0.7868688573379065 ['nc|ENSG00000069018|Q9HCX4-2|TRPC7', 'nc|ENSG00000069018|Q9HCX4-3|TRPC7', 'ENSG00000069018|ENST00000513104|TRPC7'] 43321 10818 IFVTPWAWP True H1975_Epitope_Rep2 1115.5804023373498 1115.57930993586 46.64 2 -0.3240684443898205 0.08549914554258047 0.786901142645277 ['ENST00000482847.5_1_9:116154440-116155869:-|nuORF'] 114283 11419 TPPPGLASA True PC9_epitope_Rep3 809.42831837005 809.4272299358599 48.924 2 -0.3241405932486768 0.08549914554258047 0.7869779883373207 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 40017 12816 HPRVDRMVVP True PC9_epitope_Rep1 1204.64989596284 1204.6482449037899 54.171 3 -0.32415596573398603 0.08549914554258047 0.7869943634494968 ['ENST00000406520.7_1_22:19939075-19948724:+|nuORF'] 101942 16081 SLQAQTVLL True PC9_epitope_Rep5 971.5651461960299 971.56404993586 66.844 2 -0.3242127872312454 0.08549914554258047 0.7870548967394749 ['ENSG00000157445|ENST00000474759|CACNA2D3', 'nc|ENSG00000157445|Q8IZS8-2|CACNA2D3', 'ENST00000478261.5_1_3:55107739-55108230:+|nuORF'] 63277 17578 LLSQLGQPSI True PC9_epitope_Rep5 1054.60225998074 1054.60116993586 72.622 2 -0.3242449851920182 0.08551390223931077 0.7870892020278589 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 121225 5591 VESWRSQYRPA True PC9_epitope_Rep5 1377.67894716165 1377.67729490379 26.508 3 -0.32432425283947114 0.08551390223931077 0.7871736701337709 ['ENST00000550379.1_1_12:56606885-56607800:-|nuORF'] 76261 6899 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54382490379 31.939 3 -0.3243459048967436 0.08556273473238284 0.7871967457885684 ['ENSG00000174231|ENST00000304992|PRPF8'] 96564 6656 SAEVELQAK True NCI_RA007_Epitope_Rep4 973.5080252427299 973.50692993586 32.224 2 -0.3244011221277942 0.08556273473238284 0.7872555994908351 ['ENSG00000171051|ENST00000304748|FPR1'] 109686 7169 TEDAPRPPVP True H1975_Epitope_Rep3 1077.5454733806098 1077.54436993586 32.55 2 -0.32441374368433745 0.08556273473238284 0.787269053483985 ['nc|ENSG00000103126|O15169-2|AXIN1', 'ENSG00000103126|ENST00000262320|AXIN1'] 68909 12240 LTNQQRYVL True PC9_epitope_Rep1 1133.61930702721 1133.61766490379 51.94 3 -0.32442564407125113 0.08557748785219728 0.7872817391571405 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 125900 14415 VLAVREPLL True PC9_epitope_Rep3 1008.6331661861999 1008.63206993586 60.551 2 -0.32446822521785623 0.08557748785219728 0.7873271334489728 ['ENST00000273308.8_2_12:56709793-56710018:-|nuORF'] 58935 13340 LETPWVSL True PC9_epitope_Rep2 943.5014833103099 943.50038993586 56.586 2 -0.3245225270381463 0.08559376334899615 0.7873850302105397 ['ENST00000324333.14_1_9:3827742-3827916:-|nuORF'] 103651 6842 SPTSLAET True PC9_epitope_Rep4 804.38651312772 804.38540993586 33.539 2 -0.32457268893765734 0.08560851457658492 0.787438520420576 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 7180 8316 AQYEEMAKC True PC9_epitope_Rep3 1071.4365171785898 1071.4354099358602 36.959 2 -0.32469622376422197 0.08560851457658492 0.7875702824988067 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 31983 6354 GEQEGAMVAA True NCI_RA007_Epitope_Rep4 961.4174959861698 961.41638993586 31.047 2 -0.32472002451983834 0.08563953798786239 0.7875956733536347 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 17029 8118 EGEAQRYFD True H1975_Epitope_Rep3 1113.47270236317 1113.4716099358602 36.203 2 -0.32478093226433097 0.08563953798786239 0.7876606576419474 ['ENSG00000176853|ENST00000334705|FAM91A1'] 41048 8935 HTLFGDELC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep1 1218.5703085088896 1218.56866490379 38.756 3 -0.324866616028175 0.08563953798786239 0.7877520941796928 ['CON__P02769'] 33798 8103 GLLISDLRPP True H1975_Epitope_Rep1 1079.63389446219 1079.63278993586 36.114 2 -0.3248861845140155 0.08565581064246307 0.7877729794379851 ['ENST00000326019.10_1_2:27886341-27886545:+|nuORF'] 57116 9519 LDTAVLSAT True PC9_epitope_Rep4 889.4756624852901 889.47456993586 44.226 2 -0.32493123586147094 0.08566903350951185 0.787821066489801 ['RYR2|p.A2506V|1|0.17|ENSG00000198626|chr1:237649881-237649881|C/T|missense_variant'] 142316 15443 YYDPKHVIF True PC9_epitope_Rep5 1180.59169529704 1180.5900449037902 64.41 3 -0.324977394342502 0.08566903350951185 0.7878703413261536 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 4766 6041 ALDSSRLVP True NCI_RA007_Epitope_Rep5 956.52909504048 956.52798993586 29.918 2 -0.3249819894349968 0.08566903350951185 0.7878752469882416 ['ENSG00000186451|ENST00000334325|SPATA12'] 93372 15932 RPYRFYFYMWK True NCI_RA007_Epitope_Rep5 1655.8071248802296 1655.8060299358601 68.007 2 -0.32512325556758237 0.08571021867938293 0.7880260905896076 ['ENSG00000197106|ENST00000331565|SLC6A17'] 46991 5745 ITQIEHEVSSS True NCI_RA007_Epitope_Rep4 1228.5935457718401 1228.59244993586 28.716 2 -0.3251371782895044 0.08571021867938293 0.788040960352022 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 100462 7657 SLAIRSPTL True PC9_epitope_Rep2 956.5654805492001 956.56438993586 34.823 2 -0.32515051406244094 0.08571021867938293 0.788055203765664 ['ENSG00000283247|ENST00000636578|CCDC201'] 142369 15398 YYEKLHTYF True PC9_epitope_Rep1 1262.5971746003 1262.59552490379 64.047 3 -0.32515990640374887 0.08571021867938293 0.7880652356638758 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 75065 10193 NHVANSPVSI True PC9_epitope_Rep1 1036.53015766964 1036.5290699358602 44.086 2 -0.32516589391379264 0.08571021867938293 0.7880716310172475 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 43799 7318 IHQVSLVL True PC9_epitope_Rep2 907.5491022090699 907.54800993586 33.532 2 -0.32517174407524946 0.08571021867938293 0.7880778797665727 ['RB1CC1|p.D720V|1|0.16|ENSG00000023287|chr8:52657670-52657670|T/A|missense_variant'] 64885 7550 LQEDFSFQT True H1975_Epitope_Rep3 1113.4978544818498 1113.4967499358602 34.022 2 -0.3251736692181569 0.08571021867938293 0.7880799360964988 ['nc|ENSG00000198919|Q86Y13-2|DZIP3', 'DZIP3|p.E617Gfs*4|1|0.14|ENSG00000198919|chr3:108648000-108648000|A/-|frameshift_variant', 'DZIP3|p.M985Cfs*19|1|0.17|ENSG00000198919|chr3:108684283-108684283|A/-|frameshift_variant', 'ENSG00000198919|ENST00000361582|DZIP3'] 37798 13453 GYEPPVQESV True PC9_epitope_Rep4 1103.51350454599 1103.51297496793 59.645 1 -0.32517776022059597 0.08571021867938293 0.7880843059119743 ['ENSG00000145425|ENST00000274065|RPS3A'] 66844 11105 LSMTSNTI True PC9_epitope_Rep3 865.4215187374501 865.4204299358599 47.713 2 -0.3251906847827756 0.08572648660190028 0.7880981116366264 ['ENSG00000125686|ENST00000300651|MED1', 'MED1|p.A1554S|1|0.3|ENSG00000125686|chr17:39407561-39407561|C/A|missense_variant'] 102041 21300 SLQVHQTLSV True PC9_epitope_Rep5 1110.6033226099 1110.6022299358601 86.982 2 -0.3253222873663816 0.08581392452360194 0.7882387140860507 ['nc|ENSG00000167077|Q5TIA1-5|MEI1', 'nc|ENSG00000167077|Q5TIA1-3|MEI1', 'nc|ENSG00000167077|Q5TIA1-2|MEI1', 'ENSG00000167077|ENST00000401548|MEI1', 'nc|ENSG00000167077|Q5TIA1-7|MEI1', 'ENST00000484966.1_1_22:42177657-42189882:+|nuORF', 'SREBF2-MEI1|1|fusion'] 139338 20251 YLLIPLLER True PC9_epitope_Rep6 1128.69068106232 1128.68958993586 90.58 2 -0.32551714238337437 0.08586577467795886 0.7884469870151115 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7'] 97387 4901 SEDQIVTKAA True H1975_Epitope_Rep2 1060.540053647 1060.53894993586 23.935 2 -0.3256444772771572 0.08591762298727872 0.7885831501680527 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF', 'ENST00000483212.1_1_3:49315728-49316342:-|nuORF'] 83551 11805 PTWERRLRWEG True H1975_Epitope_Rep1 1484.7636798451197 1484.7625899358602 50.402 2 -0.3256823167125856 0.08594556128802704 0.7886236221979068 ['ENST00000564526.1_1_16:85009951-85010841:-|nuORF', 'ENSG00000153786|ENST00000313732|ZDHHC7', 'nc|ENSG00000153786|Q9NXF8-2|ZDHHC7'] 126029 11180 VLDVVERSL True NCI_RA007_Epitope_Rep2 1028.5866099165999 1028.58550993586 48.069 2 -0.3256914360737382 0.08594556128802704 0.788633376646026 ['ENST00000371206.6_1_10:97583001-97605437:+|nuORF', 'nc|ENSG00000138185|P49961-3|ENTPD1', 'nc|ENSG00000138185|P49961-4|ENTPD1', 'nc|ENSG00000138185|P49961-5|ENTPD1', 'ENSG00000138185|ENST00000371205|ENTPD1', 'nc|ENSG00000138185|P49961-2|ENTPD1', 'nc|ENSG00000138185|P49961-6|ENTPD1', 'ENST00000490659.5_1_10:97583001-97604470:+|nuORF'] 4472 12548 AIVDKVSSV True PC9_epitope_Rep3 916.52294703088 916.52184993586 53.287 2 -0.3257158618274324 0.08594556128802704 0.7886595046503003 ['ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 22962 8277 EVEQERRLSEA True H1975_Epitope_Rep2 1344.66335666716 1344.66224993586 36.788 2 -0.32573000331441615 0.08594556128802704 0.7886746324693057 ['nc|ENSG00000197948|Q86WN1-3|FCHSD1', 'ENSG00000197948|ENST00000435817|FCHSD1', 'nc|ENSG00000197948|Q86WN1-2|FCHSD1'] 96830 5657 SASDVTEQIIK True NCI_RA007_Epitope_Rep5 1189.6190322436898 1189.61737490379 28.449 3 -0.32576322365586174 0.08594556128802704 0.7887101721535504 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 16894 20415 EFLGAPVG True PC9_epitope_Rep1 788.4068546494799 788.40630496793 83.339 1 -0.3258372143754834 0.08599434294558199 0.7887893403239622 ['IKZF4|p.P387Hfs*56|1|0.17|ENSG00000123411|chr12:56034732-56034732|C/-|frameshift_variant', 'nc|ENSG00000123411|Q9H2S9-2|IKZF4', 'ENST00000551124.5_1_12:56418779-56429112:+|nuORF', 'ENSG00000123411|ENST00000547167|IKZF4'] 76285 9379 NPNEEVAEV True H1975_Epitope_Rep1 999.4509042894299 999.44980993586 40.985 2 -0.3258485956227963 0.08599434294558199 0.7888015193917327 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM', 'ASPM|p.I79F|1|0.12|ENSG00000066279|chr1:197146203-197146203|T/A|missense_variant'] 29845 17061 FVSLPTPVLPR True NCI_RA007_Epitope_Rep2 1224.7230438197598 1224.72194993586 71.101 2 -0.3258563902776316 0.08599434294558199 0.788809860667604 ['ENSG00000173988|ENST00000595396|LRRC63'] 54422 12767 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64810993586 57.457 2 -0.32589427576601177 0.08601060234105383 0.7888504055137198 ['ENSG00000154016|ENST00000284154|GRAP', 'GRAP|p.G116E|1|0.37|ENSG00000154016|chr17:19024336-19024336|C/T|missense_variant'] 41575 6539 HYYSRQRGRRN True H1975_Epitope_Rep3 1491.7555747729098 1491.7539149037902 30.12 3 -0.3259225405067341 0.08602533086665717 0.7888806570265001 ['nc|ENSG00000212643|Q15695|ZRSR2P1'] 91131 11189 RFVEKYTEL True PC9_epitope_Rep6 1183.62372370131 1183.62208490379 54.009 3 -0.32593656899371337 0.08602533086665717 0.788895672466164 ['ENSG00000181610|ENST00000313608|MRPS23'] 40288 16106 HQLTEVGTMNI True PC9_epitope_Rep3 1241.60742201417 1241.60632993586 67.103 2 -0.32600403771289604 0.08605325412212518 0.7889678958897564 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 127619 21115 VPAAAFSDVL True PC9_epitope_Rep1 988.5229470308799 988.52184993586 86.049 2 -0.3260106579752856 0.08605325412212518 0.7889749834174397 ['ENSG00000174282|ENST00000380599|ZBTB4'] 13480 7454 DNIQTVKRLRT True NCI_RA007_Epitope_Rep1 1342.7680965192199 1342.76698993586 32.992 2 -0.3260231583664985 0.08605325412212518 0.7889883664492063 36545 18618 GVGVAGVAAAP True PC9_epitope_Rep1 867.4814165720699 867.48030993586 76.402 2 -0.3260463369557957 0.08605325412212518 0.7890131828649082 ['nc|ENSG00000143322|P42684-4|ABL2', 'nc|ENSG00000143322|P42684-7|ABL2', 'nc|ENSG00000143322|P42684-10|ABL2', 'nc|ENSG00000143322|P42684-5|ABL2', 'nc|ENSG00000143322|P42684-2|ABL2', 'nc|ENSG00000143322|P42684-6|ABL2', 'nc|ENSG00000143322|P42684-3|ABL2', 'ENSG00000143322|ENST00000502732|ABL2'] 64413 13553 LPMRLRYY True H1975_Epitope_Rep1 1110.6008205121 1110.59972993586 57.255 2 -0.3260592349377268 0.08605325412212518 0.7890269929132585 ['ENST00000378292.7_1_9:35690423-35690990:-|nuORF'] 10133 13770 AYVHMVTHF True PC9_epitope_Rep1 1103.52223583823 1103.52167496793 57.812 1 -0.3261043783773962 0.08610355192714725 0.7890753324472415 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 42352 8317 IEAQELAR True PC9_epitope_Rep1 928.4977949121999 928.49668993586 36.825 2 -0.3261153824691864 0.08610355192714725 0.7890871165156916 ['nc|ENSG00000163681|Q14BN4-5|SLMAP', 'nc|ENSG00000163681|Q14BN4-4|SLMAP', 'nc|ENSG00000163681|Q14BN4-2|SLMAP', 'nc|ENSG00000163681|Q14BN4-3|SLMAP', 'nc|ENSG00000163681|Q14BN4|SLMAP', 'ENSG00000163681|ENST00000671191|SLMAP'] 19670 9342 ELRERYHF True PC9_epitope_Rep5 1148.57269118796 1148.5710449037902 40.887 3 -0.326116846878378 0.08613759248719408 0.7890886847497331 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128441244-128446479:+|nuORF', 'nc|ENSG00000128596|Q96JN2-3|CCDC136'] 83813 6276 PVLKNPDDPDT True PC9_epitope_Rep6 1209.5877321154098 1209.5866299358602 32.647 2 -0.3261374598399577 0.08615078165294254 0.7891107598094125 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 67346 13231 LSSGHSSYAI True PC9_epitope_Rep3 1020.4876241513199 1020.48652993586 55.927 2 -0.32614556190094185 0.08615078165294254 0.7891194368970886 ['nc|ENSG00000211637|A0A075B6H9|IGLV4-69'] 18175 16990 EIKYMLWL True PC9_epitope_Rep1 1094.58343911246 1094.58234993586 70.176 2 -0.3261459541450596 0.08615078165294254 0.7891198569847646 ['ENSG00000036473|ENST00000039007|OTC'] 98595 7335 SFSPGQSQVT True H1975_Epitope_Rep3 1036.48253877088 1036.48197496793 33.19 1 -0.32616660907642114 0.08618328620462751 0.78914197874609 ['ENSG00000177613|ENST00000331173|CSTF2T'] 91788 27204 RKGRCHRG True PC9_epitope_Rep3 968.5198848527998 968.51878993586 111.95 2 -0.3261689099345445 0.08618328620462751 0.7891444430788878 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 97190 7191 SDWADCKSP True H1975_Epitope_Rep3 1007.40184592203 1007.40074993586 32.636 2 -0.3263035325920679 0.08619647175985204 0.7892886574492665 ['nc|ENSG00000072694|P31994-5|FCGR2B', 'nc|ENSG00000072694|P31994-2|FCGR2B', 'nc|ENSG00000072694|P31994-3|FCGR2B', 'nc|ENSG00000072694|P31994-4|FCGR2B', 'ENSG00000072694|ENST00000358671|FCGR2B', 'ENST00000496692.6_1_1:161551173-161559386:+|nuORF', 'ENST00000466542.6_1_1:161551173-161559386:+|nuORF', 'ENST00000485778.1_1_1:161633004-161641486:+|nuORF', 'nc|ENSG00000244682|P31995-4|FCGR2C', 'ENST00000480308.5_1_1:161633004-161643868:+|nuORF', 'nc|ENSG00000244682|P31995-3|FCGR2C', 'nc|ENSG00000244682|P31995-2|FCGR2C', 'nc|ENSG00000244682|P31995|FCGR2C'] 128574 19639 VPTLVTPSA True PC9_epitope_Rep1 883.50148331031 883.50038993586 80.366 2 -0.32639721036343583 0.08619647175985204 0.7893890407643709 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 9349 6549 AVRVPRRRQQR True H1975_Epitope_Rep1 1420.8599802717997 1420.8583349037901 30.248 3 -0.32642839258901624 0.08619647175985204 0.7894224606975644 ['ENSG00000182752|ENST00000328252|PAPPA', 'PAPPA|p.W297Lfs*37|1|0.32|ENSG00000182752|chr9:116187624-116187625|-/C|frameshift_variant'] 127875 6705 VPGECAPPP True NCI_RA007_Epitope_Rep2 865.4003893700499 865.39928993586 30.693 2 -0.326462676276308 0.08620505707884349 0.7894592079168282 ['ENST00000265052.9_1_3:127409300-127409504:-|nuORF'] 55388 11582 LAEQPWPPLP True PC9_epitope_Rep3 1146.6073453611798 1146.6062499358602 49.565 2 -0.3264915462139703 0.08620505707884349 0.7894901550130426 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 96260 16930 RYQQIESYYP True PC9_epitope_Rep5 1345.6302656337298 1345.62862490379 70.137 3 -0.326509224311321 0.08620505707884349 0.7895091062216554 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 28390 12976 FRYMRIYRRYI True H1975_Epitope_Rep3 1635.8820211559898 1635.8809299358602 55.145 2 -0.3265164840154721 0.08620505707884349 0.7895168890051876 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 83686 14038 PVFAKTVSI True NCI_RA007_Epitope_Rep5 960.5644179200399 960.56332993586 60.688 2 -0.32653171392682434 0.08620505707884349 0.7895332167649235 ['nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'ENSG00000181631|ENST00000325602|P2RY13'] 116953 9346 TVGEITDALKK True NCI_RA007_Epitope_Rep1 1173.6605031328497 1173.6594099358601 40.347 2 -0.3266553879252694 0.08620505707884349 0.7896658306674931 ['ENSG00000146085|ENST00000274813|MMUT'] 68652 9806 LTIQNTLL True NCI_RA007_Epitope_Rep4 914.54368247546 914.54258993586 44.569 2 -0.32670747186334875 0.08625533428165007 0.7897216927805469 ['ENST00000486166.1_1_X:16875796-16876897:-|nuORF'] 62828 27546 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 114.22 3 -0.3267423138295189 0.08625533428165007 0.7897590665596415 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 33077 9598 GINEQQTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 44.544 2 -0.32676250257938033 0.08627004729561538 0.7897807239403978 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B', 'nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A', 'ENST00000467042.1_1_2:99182504-99185377:+|nuORF'] 142308 15537 YYDPKHVIF True PC9_epitope_Rep1 1180.59169529704 1180.5900449037902 64.588 3 -0.32677618563489264 0.08627004729561538 0.7897954030383938 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 79884 21160 PELSITLTL True PC9_epitope_Rep1 985.5695628701301 985.56846993586 86.226 2 -0.3268099166153124 0.08628629340540156 0.789831591732815 ['nc|ENSG00000090097|P57723-2|PCBP4', 'ENSG00000090097|ENST00000461554|PCBP4', 'ENST00000492809.5_1_3:51994845-51995337:-|nuORF', 'ENST00000498822.5_1_3:51994845-51996905:-|nuORF'] 74336 10509 NENSAENMQI True NCI_RA007_Epitope_Rep5 1148.47680176744 1148.47570993586 47.055 2 -0.3268366388612672 0.08630253893748667 0.7898602633486339 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 74697 11659 NGSQVVTF True PC9_epitope_Rep2 850.4184819623399 850.41793496793 50.178 1 -0.32688467133004717 0.08633502826867688 0.7899118049242663 ['nc|ENSG00000124749|Q96P44-3|COL21A1', 'ENSG00000124749|ENST00000244728|COL21A1'] 100128 14562 SISVSVNFYE True H1975_Epitope_Rep2 1143.5448046742702 1143.54370993586 61.17 2 -0.3268940936772776 0.08633502826867688 0.7899219164188415 ['VWA5A|p.I26F|1|0.31|ENSG00000110002|chr11:124117705-124117705|A/T|missense_variant'] 63087 19813 LLQNNLVEL True PC9_epitope_Rep2 1054.60225998074 1054.60116993586 81.601 2 -0.32696339943965996 0.08636751528943251 0.7899962990286931 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 38037 16795 HARRVYEI True PC9_epitope_Rep6 1042.5672118846999 1042.5661099358601 77.108 2 -0.32699097980337655 0.08636751528943251 0.7900259035742836 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion', 'HAT1|p.R336L|1|0.17|ENSG00000128708|chr2:171979278-171979278|G/T|missense_variant'] 18867 5145 ELDRGYKSI True H1975_Epitope_Rep2 1079.5611234447501 1079.56002993586 24.868 2 -0.3270508996160565 0.08641931412113993 0.7900902285583156 ['ENSG00000108055|ENST00000361804|SMC3', 'ENST00000424783.1_1_2:99718519-99719212:+|nuORF'] 46328 19260 ISQQPLVQV True PC9_epitope_Rep4 1010.5760452328999 1010.57494993586 82.186 2 -0.3271523279421816 0.08645025954632723 0.7901991371403454 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000554982.5_1_14:24031495-24032684:-|nuORF'] 62829 27674 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 114.9 3 -0.32716057079762084 0.08645025954632723 0.790207989194787 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 114059 9934 TPEQIEKIY True H1975_Epitope_Rep1 1119.5811901829898 1119.58008993586 43.146 2 -0.3271684609682264 0.08645025954632723 0.7902164626810022 ['ENSG00000086288|ENST00000199447|NME8'] 44706 19157 ILVFPTSSTI True PC9_epitope_Rep1 1076.6117620352802 1076.6106699358602 78.481 2 -0.3272166885161764 0.08646649956446767 0.7902682595360043 ['ENSG00000123066|ENST00000281928|MED13L'] 78933 12361 PAGSIISLNAA True PC9_epitope_Rep5 1012.55530978832 1012.55420993586 52.542 2 -0.32726772477916377 0.0864989778686339 0.7903230802235439 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2'] 57701 13994 LEEKLKRHLE True H1975_Epitope_Rep3 1293.74048478905 1293.7393899358601 59.147 2 -0.3272791272075737 0.0864989778686339 0.7903353291786757 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF', 'TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 47764 21428 IYEPNFIFF True NCI_RA007_Epitope_Rep5 1188.5855472874398 1188.5844499358602 89.485 2 -0.32729955339161926 0.0865075274168607 0.7903572727500201 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 55473 19848 LAGCSLTTWVP True PC9_epitope_Rep2 1146.5743309807401 1146.5732299358601 81.737 2 -0.3273280359215978 0.0865075274168607 0.7903878731332629 ['ENST00000564704.5_1_16:67286600-67286678:+|nuORF'] 73709 8565 MYRRWWEQFVQ True PC9_epitope_Rep4 1627.77180200067 1627.7701649037901 40.425 3 -0.32735084018682337 0.0865075274168607 0.790412374706767 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 62841 26667 LLMCEIPMVEL True NCI_RA007_Epitope_Rep4 1289.6433391406897 1289.64169490379 117.78 3 -0.3274038246794848 0.0865075274168607 0.7904693085324416 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 58634 6924 LERDPIPAA True H1975_Epitope_Rep2 980.5290950404798 980.52798993586 31.554 2 -0.3274200911283396 0.0865075274168607 0.7904867890480244 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000493232.5_1_7:2583168-2583660:-|nuORF', 'nc|ENSG00000106009|Q6PJG6-2|BRAT1', 'ENST00000469750.5_1_7:2583168-2595320:-|nuORF'] 3061 9746 AFTVSPTFTS True NCI_RA007_Epitope_Rep4 1056.51277627 1056.51166993586 44.334 2 -0.3274299415684572 0.0865075274168607 0.790497375054614 ['ENST00000343217.6_1_2:241503143-241503332:+|nuORF'] 81101 8975 PIWVMRQDISP True H1975_Epitope_Rep1 1340.6910920684797 1340.6894549037902 39.427 3 -0.3274651760906205 0.08652222597444147 0.7905352429231914 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 17010 10508 EGCQAPRFRLI True NCI_RA007_Epitope_Rep1 1288.6710253302397 1288.6699299358602 44.856 2 -0.32752461393749066 0.08652222597444147 0.7905991310265863 ['ENST00000520864.5_1_5:170395310-170632776:+|nuORF'] 11947 4733 DHNDGLGNAF True NCI_RA007_Epitope_Rep1 1058.44173658806 1058.4406299358602 22.491 2 -0.32756804858265454 0.08653846153846154 0.7906458240843093 ['ENSG00000271447|ENST00000605424|MMP28'] 2611 5669 AERRRWYIEQP True H1975_Epitope_Rep1 1502.77424452882 1502.7725849037902 26.875 3 -0.3276075393698201 0.08655161995485809 0.7906882820740989 ['ENST00000526132.5_1_1:52522019-52530572:+|nuORF'] 101185 13722 SLGVYNCWEF True PC9_epitope_Rep1 1216.5222954078797 1216.52118993586 57.63 2 -0.32768258395664857 0.08655161995485809 0.7907689774559611 ['ENSG00000106404|ENST00000308344|CLDN15'] 111716 20544 TIGKCIYLF True PC9_epitope_Rep1 1056.56778904832 1056.56668993586 83.834 2 -0.32769815673854114 0.08655161995485809 0.7907857248570181 ['ENST00000485996.1_1_14:21944657-21945031:-|nuORF'] 107635 8903 SVQDLSTSV True PC9_epitope_Rep5 934.4607406971401 934.4596499358599 39.189 2 -0.3277408261629164 0.08656785384232601 0.7908316162601456 ['ENST00000234313.7_1_2:68622956-68623079:+|nuORF'] 100535 5119 SLAVQGGK True NCI_RA007_Epitope_Rep3 758.4286527232199 758.42754993586 27.128 2 -0.32792269531145224 0.0866714057224098 0.7910272761821913 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 97389 7057 SEDSNNNVPR True NCI_RA007_Epitope_Rep1 1130.4952287129001 1130.4941299358602 31.445 2 -0.3279359265090753 0.0866714057224098 0.7910415143226772 ['ENSG00000111727|ENST00000229330|HCFC2', 'nc|ENSG00000111727|Q9Y5Z7-2|HCFC2'] 62832 27926 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 116.26 3 -0.3279970847338247 0.08672163775945407 0.7911073333319124 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 58278 7455 LELSDVHRETT True H1975_Epitope_Rep1 1298.64664397386 1298.6455499358601 33.673 2 -0.32811771044289034 0.08672163775945407 0.7912371826584821 ['ENSG00000004142|ENST00000540200|POLDIP2'] 125733 25043 VKRRRRWYFRV True PC9_epitope_Rep1 1620.9589660370798 1620.9578699358601 101.24 2 -0.32816312739969966 0.0867378671831962 0.7912860830233928 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 4782 13584 ALDTPSLR True PC9_epitope_Rep2 871.4763311916299 871.4752299358599 57.542 2 -0.32818355877081706 0.08674176468497921 0.7913080833388588 ['ENSG00000273604|ENST00000621654|EPOP'] 90131 3457 REDDRVAIHEA True H1975_Epitope_Rep2 1309.6374762724897 1309.6358249037899 18.102 3 -0.32819684256112147 0.08674176468497921 0.7913223878331275 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 105856 12550 SSLTRQISL True PC9_epitope_Rep4 1003.56620882519 1003.56510993586 56.095 2 -0.32829025396290246 0.08674176468497921 0.7914229907978059 ['ZNF484|p.S400Cfs*167|1|0.48|ENSG00000127081|chr9:92847586-92847589|TACT/-|frameshift_variant'] 99693 6125 SIHENFSQA True PC9_epitope_Rep2 1031.4672230599099 1031.4661299358602 28.954 2 -0.3283551785026724 0.08674176468497921 0.7914929281652368 ['ENSG00000125633|ENST00000376300|CCDC93'] 42674 18759 IEIEINQTLEI True H1975_Epitope_Rep3 1313.70784724809 1313.7067499358602 78.675 2 -0.3283839144572851 0.08674176468497921 0.7915238865937582 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 90972 15018 RFCGWVEVF True PC9_epitope_Rep1 1141.5378859023697 1141.53678993586 62.587 2 -0.32839688405805945 0.08674176468497921 0.791537860036314 ['ENST00000380834.6_1_2:25043232-25043718:+|nuORF'] 126793 12935 VLPNRPFGLF True NCI_RA007_Epitope_Rep1 1158.6549642599398 1158.65386993586 54.304 2 -0.32846438355037355 0.08674176468497921 0.7916105915578074 ['ENSG00000005187|ENST00000289416|ACSM3'] 62844 26983 LLMCEIPMVEL True NCI_RA007_Epitope_Rep4 1289.6433391406897 1289.64169490379 119.55 3 -0.32849252296410303 0.08674176468497921 0.7916409158784344 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 4845 14240 ALELALHAG True PC9_epitope_Rep6 893.49706663621 893.49596993586 66.664 2 -0.3284965227357114 0.08674176468497921 0.7916452263949936 ['ENSG00000168434|ENST00000307149|COG7', 'ENST00000566364.1_1_16:23400243-23404677:-|nuORF'] 30921 7056 GAQSLQREL True NCI_RA007_Epitope_Rep4 1000.53015766964 1000.52906993586 33.765 2 -0.32859004114865203 0.08674874309367728 0.7917460230435073 ['ENST00000479606.5_1_22:21351676-21351817:+|nuORF'] 57722 16429 LEELKKQQEKE True NCI_RA007_Epitope_Rep1 1400.7511090423998 1400.7500099358601 68.019 2 -0.3286050263336088 0.08674874309367728 0.791762176744409 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 75866 10497 NLQFNNNKYY True NCI_RA007_Epitope_Rep5 1316.61494992276 1316.6138499358601 47.008 2 -0.3286051911839429 0.08674874309367728 0.7917623544529361 ['ENSG00000129484|ENST00000429687|PARP2', 'nc|ENSG00000129484|Q9UGN5|PARP2'] 26980 9403 FLEGLEERK True NCI_RA007_Epitope_Rep1 1119.59242357303 1119.5913299358601 40.567 2 -0.3286094811028088 0.08674874309367728 0.7917669790086388 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1'] 30351 7049 GAATHVVI True PC9_epitope_Rep2 766.43373810366 766.43264993586 32.512 2 -0.32863532715084326 0.08674874309367728 0.7917948422731079 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 62485 14435 LLIHRKNLNYL True PC9_epitope_Rep4 1395.83505388023 1395.83341490379 63.432 3 -0.32865766727844226 0.08674874309367728 0.791818927488432 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 102415 17622 SLTLPSVDYI True PC9_epitope_Rep1 1106.58594121026 1106.5848499358601 72.575 2 -0.32866311019739913 0.08674874309367728 0.7918247957887715 ['ENSG00000188112|ENST00000341865|C6orf132'] 73697 12638 MYQEHINEI True PC9_epitope_Rep3 1175.52810906431 1175.5270099358602 53.635 2 -0.3286804562741183 0.08676188445960349 0.7918434980665955 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 27245 9378 FLPLPVLDP True NCI_RA007_Epitope_Rep5 1009.5848190114499 1009.58372993586 42.713 2 -0.3286845084000247 0.08676188445960349 0.7918478671281823 ['ENST00000607190.1_1_2:20101816-20101957:+|nuORF'] 11215 5319 DEDKEKTFEEK True NCI_RA007_Epitope_Rep1 1396.6358045066397 1396.6347099358602 24.767 2 -0.32868904245186326 0.08676188445960349 0.7918527558635432 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 15839 9876 EDENGDDQGF True PC9_epitope_Rep3 1124.3894262316796 1124.3883299358602 42.945 2 -0.32873035345557994 0.0867958716003766 0.7918973011214364 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'HNRNPU|p.Q207Sfs*132|1|0.2|ENSG00000153187|chr1:244863689-244863689|G/-|frameshift_variant'] 29428 12802 FVDWC[Carbamidomethyl]PTGFK True H1975_Epitope_Rep3 1255.5695802328999 1255.56848993586 54.459 2 -0.3287984370813579 0.086810551558753 0.7919707253920593 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'nc|ENSG00000178462|A6NHL2-2|TUBAL3', 'ENSG00000178462|ENST00000380419|TUBAL3', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 44000 15975 IIFYFNPECLY True H1975_Epitope_Rep2 1420.67371066884 1420.67260993586 66.648 2 -0.32881057094054716 0.086810551558753 0.791983812412415 ['ENSG00000172986|ENST00000389617|GXYLT2'] 141996 16078 YVIYGIAAAF True PC9_epitope_Rep4 1086.5749826037397 1086.57388993586 69.778 2 -0.32894591694578185 0.08686229927525935 0.7921298180491377 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A'] 78931 12517 PAGSIISLNAA True PC9_epitope_Rep1 1012.55530978832 1012.55420993586 53.017 2 -0.3290134453847976 0.08691404515338295 0.7922026838925251 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2'] 110486 16869 TFGGKTSFVSL True PC9_epitope_Rep3 1142.5971746003 1142.5960699358602 70.042 2 -0.32906931316019894 0.08693026395253828 0.7922629769531396 ['nc|ENSG00000273749|Q7L576-2|CYFIP1'] 26112 11759 FGSGAGSSSF True PC9_epitope_Rep2 902.37701107318 902.37590993586 50.564 2 -0.32911106480499225 0.08696269982238011 0.7923080413743782 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 70716 10893 LWRFRYQVWPR True NCI_RA007_Epitope_Rep2 1605.8680853440098 1605.8669899358601 46.978 2 -0.32913313398381444 0.08696269982238011 0.792331863572007 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 12529 7690 DKKKPSPPAP True H1975_Epitope_Rep2 1063.6025943339098 1063.6014899358602 34.531 2 -0.3292725933844047 0.08699667856698816 0.7924824316869141 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 93205 4880 RPPPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 25.363 2 -0.32930092745214357 0.08700980392156862 0.7925130292653428 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 121202 8338 VESPESLAA True H1975_Epitope_Rep3 901.4392769765699 901.43872496793 37.057 1 -0.3293186630735057 0.08700980392156862 0.7925321828476708 ['ENSG00000052749|ENST00000370992|RRP12'] 78053 15829 NVTLAQPAMSL True PC9_epitope_Rep2 1143.59579470131 1143.59468993586 66.145 2 -0.32932644939911143 0.08700980392156862 0.7925405919623021 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 39943 19216 HPILNDPIY True PC9_epitope_Rep4 1080.56039516876 1080.55928993586 82.015 2 -0.3293715118306578 0.08702601900364089 0.7925892619831206 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 33489 15239 GLAWGATIFL True H1975_Epitope_Rep3 1047.57531695691 1047.5742099358602 64.024 2 -0.32941867835660166 0.08707775370298014 0.7926402105199323 ['TMEM47|p.S163L|1|0.08|ENSG00000147027|chrX:34630371-34630371|G/A|missense_variant'] 46955 22763 ITPENLPQILL True PC9_epitope_Rep2 1249.7281887698498 1249.72708993586 93.05 2 -0.32944275455832384 0.08709396700232654 0.7926662196063335 ['ENSG00000015479|ENST00000394805|MATR3'] 110146 7073 TENQFAEP True H1975_Epitope_Rep3 934.4032258210198 934.40212993586 32.173 2 -0.3294525372705388 0.08711017972579385 0.792676788148079 ['ENSG00000116198|ENST00000378230|CEP104', 'nc|ENSG00000116198|O60308-3|CEP104', 'ENST00000494653.5_1_1:3750422-3768971:-|nuORF'] 118389 11814 TYPAELNNI True NCI_RA007_Epitope_Rep3 1033.50802524273 1033.50747496793 53.588 1 -0.3294903637591783 0.08712639187341277 0.7927176556460654 ['ENSG00000106546|ENST00000242057|AHR'] 87396 9501 QPVSGTQVV True PC9_epitope_Rep1 913.48689587533 913.4863449679301 41.401 1 -0.3295296800097684 0.08715571892813383 0.7927601368281739 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 34939 8279 GQNSLTLQP True NCI_RA007_Epitope_Rep4 956.49270953176 956.49160993586 38.654 2 -0.32956513815790217 0.08715571892813383 0.792798452962567 ['ENSG00000101544|ENST00000262198|ADNP2', 'ADNP2|p.V571Cfs*147|1|0.2|ENSG00000101544|chr18:80137122-80137123|-/T|frameshift_variant', 'ADNP2|p.L794Qfs*9|1|0.3|ENSG00000101544|chr18:80137794-80137798|TGGGG/-|frameshift_variant'] 14227 14813 DSGYLNSQYF True H1975_Epitope_Rep3 1192.50366813828 1192.50256993586 62.359 2 -0.3296334195019662 0.08715571892813383 0.7928722475849198 ['ENST00000478277.5_1_1:161088025-161088985:+|nuORF', 'ENST00000496768.5_1_1:161087910-161088985:+|nuORF', 'ENST00000368009.6_1_1:161087910-161088985:+|nuORF', 'nc|ENSG00000158793|Q86X76-3|NIT1'] 78713 4324 PAAAAAQEP True NCI_RA007_Epitope_Rep4 824.4028318981999 824.4022849679301 22.975 1 -0.32965080687582804 0.08715571892813383 0.7928910409126201 ['ENST00000458407.1_1_2:133110346-133110880:+|nuORF'] 38471 15863 HEPRRQPR True PC9_epitope_Rep3 1074.5795079038999 1074.57840993586 66.167 2 -0.32966233189336763 0.0871703808931901 0.7929034983052861 ['ENST00000585111.1_1_17:62503303-62503453:-|nuORF', 'ENST00000584500.1_1_17:62503303-62504279:-|nuORF'] 96827 11378 SASDVFEHL True NCI_RA007_Epitope_Rep3 1003.46107505031 1003.45996993586 51.875 2 -0.32968627618661317 0.0871703808931901 0.7929293808537965 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF', 'ENST00000484926.1_1_2:202050494-202050848:+|nuORF'] 98285 11498 SEVM[Oxidation]EELEKVK True H1975_Epitope_Rep1 1335.6591831839498 1335.65808993586 49.211 2 -0.32976170670997124 0.08720434689963776 0.7930109275927608 ['ENSG00000114446|ENST00000264538|IFT57'] 82691 19918 PQSLFTLFG True PC9_epitope_Rep6 1008.5280324113199 1008.52692993586 89.271 2 -0.32986130750364734 0.0872205550721807 0.7931186281779478 ['ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 62836 28498 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 119.31 3 -0.32987309025251715 0.08725451898149793 0.7931313709159807 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 20757 15200 EQFHQFLEA True PC9_epitope_Rep4 1147.52982331647 1147.5287299358602 66.39 2 -0.3299302985265429 0.087288481684689 0.7931932455488954 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF', 'DUS3L|p.E258Kfs*28|1|0.17|ENSG00000141994|chr19:5789335-5789335|C/-|frameshift_variant'] 99342 5968 SHSSSPTVL True PC9_epitope_Rep3 913.45051036661 913.44940993586 28.012 2 -0.3300724002439198 0.08732089273983061 0.7933469766490415 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 100400 8446 SKYLIYRRYRQ True PC9_epitope_Rep2 1544.85758022996 1544.85648993586 37.856 2 -0.3301427555410705 0.08732089273983061 0.7934231099671772 ['nc|ENSG00000100365|Q15080-3|NCF4', 'ENSG00000100365|ENST00000248899|NCF4'] 37964 8761 HAELERKI True PC9_epitope_Rep6 994.5559784946599 994.55488993586 43.594 2 -0.33023935556420997 0.0873370974042115 0.7935276652019926 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-7|FLT1', 'nc|ENSG00000102755|P17948-8|FLT1'] 44991 13521 IPATPGIGA True PC9_epitope_Rep3 795.4490538146299 795.44794993586 57.059 2 -0.3302565080162822 0.0873517505858959 0.7935462328290837 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 6299 11802 APRLLLAA True PC9_epitope_Rep6 823.5279728416699 823.52686993586 56.586 2 -0.3302635811093296 0.0873517505858959 0.7935538897238374 ['ENST00000552138.5_1_14:105821400-105836438:+|nuORF'] 108556 16975 SYNNFFRMF True NCI_RA007_Epitope_Rep2 1224.53861417836 1224.53750993586 70.765 2 -0.3304369798353168 0.0874165601477063 0.7937416426760606 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 357 7939 AAKDAEKIREL True NCI_RA007_Epitope_Rep2 1242.6932002434598 1242.6915449037901 35.512 3 -0.33045604865479855 0.0874165601477063 0.7937622949829021 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 24518 12439 FAFNLYRRF True PC9_epitope_Rep3 1232.6454622054 1232.6438249037901 52.872 3 -0.330476943036211 0.0874165601477063 0.7937849255698055 ['ENSG00000123561|ENST00000372563|SERPINA7', 'CON__Q9TT36'] 79478 7435 PAYFRRHVK True PC9_epitope_Rep3 1172.6566955954402 1172.65504490379 33.604 3 -0.3305411480597761 0.0874165601477063 0.7938544730078136 ['ENSG00000196110|ENST00000591998|ZNF699'] 78870 7223 PAESIGLA True H1975_Epitope_Rep2 756.40176926904 756.40122496793 32.717 1 -0.3305921352484557 0.08744896147701048 0.7939097106537373 ['ENST00000577161.5_1_17:78811748-78857220:+|nuORF'] 66286 10837 LSFLFQLSF True PC9_epitope_Rep3 1100.5906326678798 1100.5895299358601 46.656 2 -0.33064442964218055 0.08744896147701048 0.7939663717169438 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4', 'nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF'] 36189 16446 GVAVVLALG True PC9_epitope_Rep4 797.5010893874899 797.5005449679301 71.227 1 -0.3306797823864955 0.08746516127886954 0.7940046806240048 ['nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 109616 5047 TEAFKRDINSK True H1975_Epitope_Rep3 1307.6833638357496 1307.68171490379 24.535 3 -0.3307401360973643 0.08749911240502734 0.7940700887820403 ['ENST00000450663.1_1_1:173111181-173111367:-|nuORF'] 90734 4993 RERLEQQVP True NCI_RA007_Epitope_Rep1 1153.62036965637 1153.61872490379 23.505 3 -0.3308271816934184 0.0875477056891808 0.7941644413363309 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 12270 16863 DILADLIPK True H1975_Epitope_Rep1 996.5855472874399 996.58444993586 70.273 2 -0.3308431720662466 0.0875477056891808 0.7941817762045411 ['ENST00000546621.5_1_12:56668606-56679804:-|nuORF', 'ENSG00000062485|ENST00000351328|CS'] 98239 14885 SEVEIAWPA True H1975_Epitope_Rep1 1000.4865615221598 1000.48546993586 62.489 2 -0.3308579124684715 0.0875477056891808 0.7941977566067964 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 29866 14597 FVTFDEHD True PC9_epitope_Rep2 1008.4188758851599 1008.41776993586 61.416 2 -0.33092711030555944 0.08756390230048282 0.7942727832825313 ['ENST00000411735.2_1_1:191115527-191115704:-|nuORF'] 44749 7137 ILYNNHKFTNA True H1975_Epitope_Rep3 1333.67788453249 1333.6767899358601 32.424 2 -0.3311002886228817 0.08761093361732339 0.794460605016589 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.W489*|1|0.16|ENSG00000081237|chr1:198718109-198718109|G/-|frameshift_variant'] 68573 14775 LTGTWTSV True PC9_epitope_Rep4 863.43888305375 863.43778993586 64.764 2 -0.33111451752797433 0.08761093361732339 0.7944760406149843 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 91350 13013 RGVQPLVI True PC9_epitope_Rep4 880.5494365622399 880.54832993586 57.949 2 -0.331139282852817 0.08761093361732339 0.7945029074631024 ['nc|nan|Q6UWU4-3|C6orf89', 'ENSG00000198663|ENST00000480824|C6orf89', 'nc|nan|Q6UWU4-2|C6orf89'] 81414 6684 PLEHYILELK True NCI_RA007_Epitope_Rep5 1253.70197402201 1253.70031490379 32.38 3 -0.3311872179876318 0.08761093361732339 0.7945549148721446 ['NUP210L|p.Q297K|1|0.18|ENSG00000143552|chr1:154135934-154135934|G/T|missense_variant'] 25639 8249 FEPLSSPDGP True NCI_RA007_Epitope_Rep5 1044.4763907612798 1044.47528993586 38.408 2 -0.33128308508905346 0.087677262481586 0.794658944504485 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19', 'ENST00000452841.1_1_13:19467552-19468185:-|nuORF'] 42673 18874 IEIEINQTLEI True H1975_Epitope_Rep1 1313.70784724809 1313.7067499358602 78.703 2 -0.3312834863769027 0.087677262481586 0.7946593800107761 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 117372 12000 TVPIYEGY True H1975_Epitope_Rep1 940.4541987647199 940.4536549679301 51.165 1 -0.3312953383607275 0.087677262481586 0.794672242823716 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000415776.1_1_Y:19869357-19869702:-|nuORF', 'ENST00000415794.1_1_3:139212993-139213512:+|nuORF'] 93497 4035 RQKNKNVEI True NCI_RA007_Epitope_Rep2 1127.64110510095 1127.63944490379 20.333 3 -0.3313041439020754 0.08768878556089943 0.794681799610311 ['KBTBD12|p.L574Ffs*21|1|0.23|ENSG00000187715|chr3:127984125-127984126|-/T|frameshift_variant', 'ENSG00000187715|ENST00000405109|KBTBD12'] 70660 24189 LWHIWRERN True PC9_epitope_Rep4 1308.68397297244 1308.68233490379 101.52 3 -0.3313044444278355 0.08768878556089943 0.7946821257790588 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 60770 7661 LHSGVDEL True PC9_epitope_Rep1 868.42904664604 868.4279499358599 34.291 2 -0.33135237563041275 0.08768878556089943 0.7947341498649023 ['ENST00000394430.5_1_11:64511463-64511499:-|nuORF', 'nc|ENSG00000068831|Q7LDG7-2|RASGRP2'] 142314 13963 YYDPKHVIF True PC9_epitope_Rep4 1180.59169529704 1180.5900449037902 61.61 3 -0.33140393347860136 0.08768878556089943 0.7947901170487225 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 101297 18819 SLIGLQQQF True PC9_epitope_Rep2 1032.56039516876 1032.55928993586 77.758 2 -0.3314143913985122 0.08770186335403726 0.7948014702073153 ['ENST00000421112.1_1_2:13142712-13143995:-|nuORF', 'ENST00000414661.1_1_2:13143779-13143995:-|nuORF'] 114491 18559 TPYNYPVPV True PC9_epitope_Rep4 1048.5229470308798 1048.5223749679299 79.463 1 -0.3314270891905219 0.08770186335403726 0.794815255367374 ['ENSG00000170906|ENST00000485876|NDUFA3'] 136138 8409 WRRADGKPIAR True PC9_epitope_Rep6 1324.7476358581598 1324.74598490379 42.027 3 -0.3314466056780646 0.08770186335403726 0.7948364439665334 ['ENSG00000144619|ENST00000418658|CNTN4', 'CNTN4|p.R342Kfs*7|1|0.07|ENSG00000144619|chr3:2900766-2900767|-/CAAAAGTACACTT|frameshift_variant', 'CNTN4|p.G444Efs*5|1|0.82|ENSG00000144619|chr3:2925747-2925747|G/-|frameshift_variant', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 102093 8044 SLRGTGVL True PC9_epitope_Rep1 801.4708518883699 801.46974993586 35.763 2 -0.33147845538193804 0.08773579883231886 0.7948710246084542 ['ENSG00000163395|ENST00000335211|IGFN1'] 101602 15897 SLLQIQMR True PC9_epitope_Rep5 987.55353596651 987.55242993586 66.138 2 -0.33152441733898175 0.08775198750709824 0.7949209322599967 ['ENSG00000172766|ENST00000379406|NAA16', 'nc|ENSG00000172766|Q6N069-5|NAA16', 'ENST00000476980.5_1_13:41885589-41929305:+|nuORF', 'nc|ENSG00000172766|Q6N069-4|NAA16', 'nc|ENSG00000172766|Q6N069-3|NAA16', 'nc|ENSG00000172766|Q6N069-2|NAA16', 'NAA15|p.E275Kfs*21|1|0.26|ENSG00000164134|chr4:139351201-139351210|AGAACGGCTA/-|frameshift_variant', 'nc|ENSG00000164134|Q9BXJ9-4|NAA15', 'NAA15|p.D846Efs*12|1|0.06|ENSG00000164134|chr4:139388020-139388021|-/AAGAAAAAAAGTCATG|frameshift_variant', 'ENSG00000164134|ENST00000296543|NAA15'] 67341 17048 LSSFSHEEV True PC9_epitope_Rep1 1033.4716397340098 1033.4705499358602 70.401 2 -0.3315908832373092 0.0877650607754414 0.794993113881035 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000557695.1_1_14:31572066-31574703:-|nuORF'] 11955 4143 DHNDGLGNAF True NCI_RA007_Epitope_Rep5 1058.44173658806 1058.4406299358602 22.439 2 -0.3316048115476066 0.0877650607754414 0.7950082414251105 ['ENSG00000271447|ENST00000605424|MMP28'] 99521 10351 SIDPWWVP True PC9_epitope_Rep1 998.4861675993399 998.48506993586 44.696 2 -0.33161524268536186 0.0877650607754414 0.7950195710221762 ['EPN2|p.G394W|1|0.22|ENSG00000072134|chr17:19328743-19328743|G/T|missense_variant'] 107174 20011 SVIIPGMTL True PC9_epitope_Rep6 929.52558988317 929.52448993586 89.638 2 -0.33167345893937034 0.08778124778195756 0.7950828068287757 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 61237 12535 LIMRLKMFL True PC9_epitope_Rep4 1163.6922783687899 1163.69062490379 56.036 3 -0.33168374017952806 0.08779743421402843 0.7950939754671794 ['ENST00000436258.1_1_7:35131492-35145694:-|nuORF', 'ENST00000413230.6_1_12:63954294-63977630:-|nuORF', 'DPY19L2|p.L624Yfs*33|1|0.37|ENSG00000177990|chr12:63580691-63580691|A/-|frameshift_variant', 'ENSG00000177990|ENST00000324472|DPY19L2'] 1012 8149 AEADENDMFNY True H1975_Epitope_Rep3 1317.48194671753 1317.48084993586 36.323 2 -0.33175140201806125 0.08781362007168458 0.7951674842705997 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 53881 7351 KTKRRILIRFN True NCI_RA007_Epitope_Rep4 1443.9150355364297 1443.91339490379 34.916 3 -0.3317792805881748 0.08782513040701181 0.7951977754416588 ['ENST00000415149.6_1_3:107429416-107435478:+|nuORF'] 118463 14295 TYPKIWVKV True PC9_epitope_Rep4 1132.66446631448 1132.66282490379 62.887 3 -0.3317976662994477 0.08782513040701181 0.7952177533584316 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 137728 16011 YENELMLMA True H1975_Epitope_Rep1 1112.48821839828 1112.4871299358601 66.921 2 -0.33180600926120485 0.08782513040701181 0.7952268191136668 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1'] 121110 13925 VERKGEVL True PC9_epitope_Rep5 928.5341804209198 928.53308993586 58.583 2 -0.33185002096944605 0.08782513040701181 0.7952746467938285 ['ENSG00000124508|ENST00000356709|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'nc|ENSG00000112763|Q7KYR7-3|BTN2A1', 'ENST00000377600.6_1_6:26463094-26468774:+|nuORF', 'nc|ENSG00000112763|Q7KYR7-5|BTN2A1', 'ENSG00000112763|ENST00000312541|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-1|BTN2A1'] 47627 14345 IVYQPHLISV True PC9_epitope_Rep5 1167.66519459047 1167.6640899358601 60.178 2 -0.3319365248445937 0.08787679860901655 0.7953686656089248 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-5|ATP7A'] 4299 23407 AIIEYMPLL True PC9_epitope_Rep3 1061.5831047592899 1061.58257496793 95.315 1 -0.332005571612946 0.08792846497764531 0.7954437247563545 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 45379 4634 IQEAGTEVVK True H1975_Epitope_Rep3 1072.5764391557198 1072.57534993586 22.946 2 -0.33207323182229465 0.08794152607021839 0.7955172886529451 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 698 13717 AAVDAGMAM True PC9_epitope_Rep5 835.35681030591 835.35570993586 57.789 2 -0.3321073186742191 0.08794152607021839 0.795554354262161 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 92023 21987 RKRRRRRRRWQ True PC9_epitope_Rep3 1709.0523063416397 1709.05120993586 89.872 2 -0.33211872769983997 0.08794152607021839 0.7955667609661302 ['ENST00000487093.5_1_3:51575631-51661706:+|nuORF'] 136883 8452 YAEIDICPA True NCI_RA007_Epitope_Rep2 993.4477334852899 993.44662993586 37.519 2 -0.33214277857482033 0.08795770650014192 0.7955929161117199 ['nc|ENSG00000108100|Q8ND76-3|CCNY', 'nc|ENSG00000108100|Q8ND76-2|CCNY', 'ENSG00000108100|ENST00000374704|CCNY'] 20649 7611 EQAAAEKRHRE True NCI_RA007_Epitope_Rep1 1323.66435972667 1323.66271490379 33.597 3 -0.3322441465446356 0.08799375654055588 0.7957031695113111 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 63453 9882 LLVVQEEAA True PC9_epitope_Rep4 970.5335117145798 970.53240993586 45.661 2 -0.33226295160846764 0.08799375654055588 0.7957236258641104 ['ENST00000581560.5_1_17:16335592-16336976:+|nuORF'] 19989 13910 ELWQEEEQKRR True PC9_epitope_Rep3 1529.7586540343298 1529.7570149037902 58.586 3 -0.3322658015053278 0.08799375654055588 0.7957267260927141 ['ENSG00000159450|ENST00000614923|TCHH'] 70622 24910 LWHIWRERN True NCI_RA007_Epitope_Rep2 1308.68397297244 1308.68233490379 104.73 3 -0.3322790001350092 0.08799375654055588 0.795741084349101 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 56840 7268 LDPALTLYSAP True H1975_Epitope_Rep3 1159.61249031127 1159.6113899358602 32.929 2 -0.33229083351597294 0.08799375654055588 0.7957539577894007 ['ENST00000429683.1_1_22:32021901-32028265:-|nuORF'] 40900 9857 HSNSDCGK True PC9_epitope_Rep1 846.32901533494 846.32790993586 42.774 2 -0.3323198304893513 0.08799375654055588 0.7957855048937014 ['nc|ENSG00000159917|Q14590-2|ZNF235', 'ENSG00000159917|ENST00000291182|ZNF235'] 99961 12714 SINSHATEWSP True H1975_Epitope_Rep3 1227.55201531303 1227.55090993586 54.115 2 -0.3323509854772286 0.08799375654055588 0.7958194022172785 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 11601 21562 DGFLSELTQQL True NCI_RA007_Epitope_Rep1 1249.6190322436898 1249.61792993586 88.224 2 -0.3323794806609818 0.08799375654055588 0.7958504078060517 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 130641 15648 VSTADNIYV True PC9_epitope_Rep6 980.48147614172 980.48036993586 72.394 2 -0.3324206854956092 0.08799375654055588 0.7958952464553736 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 17452 5130 EHERPRRLRL True PC9_epitope_Rep1 1360.7799986155999 1360.7783549037902 24.585 3 -0.33248461133326523 0.08799375654055588 0.7959648184926643 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 111929 5297 TIPRGDGVTP True H1975_Epitope_Rep3 1011.5349086969098 1011.53380993586 25.454 2 -0.3325123897432523 0.08799375654055588 0.7959950536794607 ['ENST00000480912.5_1_6:31847863-31860642:-|nuORF', 'nc|ENSG00000204371|Q96KQ7-2|EHMT2', 'ENSG00000204371|ENST00000375537|EHMT2'] 103792 20749 SPVWIMCLHVP True PC9_epitope_Rep1 1280.64097107192 1280.6398699358601 84.638 2 -0.3326075550711402 0.088008371614551 0.7960986506028941 ['ENST00000375663.7_1_6:31748338-31748531:-|nuORF'] 63149 23731 LLRLRLRLRRL True PC9_epitope_Rep5 1477.0205036644797 1477.01940993586 96.263 2 -0.3326251571618489 0.088008371614551 0.7961178147677355 ['ENST00000234111.8_1_2:10588250-10588409:-|nuORF'] 55308 11555 LAEAALELREE True PC9_epitope_Rep1 1242.6455813446998 1242.64448993586 49.325 2 -0.3326517211443672 0.08802454684119045 0.7961467376335825 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 100944 6691 SLFHFQKCFPT True H1975_Epitope_Rep1 1353.65397828377 1353.6523349037902 30.785 3 -0.3326801035156636 0.08804072149406736 0.7961776423507918 ['ENST00000562539.1_1_16:74946047-74949971:-|nuORF'] 58730 10000 LERVNLSA True PC9_epitope_Rep5 900.5028802926399 900.50178993586 43.441 2 -0.3327322820299497 0.08805064907427113 0.7962344633339787 ['ENSG00000114209|ENST00000392750|PDCD10', 'ENST00000481136.1_1_3:167422617-167437945:-|nuORF'] 35958 18216 GTTVPLAGV True PC9_epitope_Rep4 813.4596184983299 813.45852993586 78.136 2 -0.3327473403855759 0.08805064907427113 0.7962508627623667 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 22067 7832 ESLTDTQL True NCI_RA007_Epitope_Rep3 905.43419159613 905.43364496793 37.929 1 -0.33276712049248247 0.08805064907427113 0.7962724053296891 ['ENSG00000113615|ENST00000398844|SEC24A'] 129478 26285 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 108.77 2 -0.33277389788722983 0.08805064907427113 0.7962797868371586 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 5025 12181 ALIGSLVGTAI True NCI_RA007_Epitope_Rep4 1013.6120963884499 1013.61098993586 53.848 2 -0.3328050560408102 0.08805064907427113 0.7963137238181168 ['VSIG1|p.A247T|1|0.2|ENSG00000101842|chrX:108076127-108076127|G/A|missense_variant'] 81412 6507 PLEHYILELK True NCI_RA007_Epitope_Rep5 1253.70197402201 1253.70031490379 31.695 3 -0.3328767345068518 0.08806682154320879 0.7963918042478565 ['NUP210L|p.Q297K|1|0.18|ENSG00000143552|chr1:154135934-154135934|G/T|missense_variant'] 64700 20542 LPVSPSLLPV True PC9_epitope_Rep5 1020.62193279616 1020.62082993586 84.059 2 -0.332903241007893 0.08807986948503334 0.7964206814732366 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 40878 6298 HSFRKIFQWPP True PC9_epitope_Rep2 1441.7618889399698 1441.76023490379 29.623 3 -0.3329302061702899 0.08807986948503334 0.7964500602055036 ['CYLC1|p.L85F|1|0.19|ENSG00000183035|chrX:83872963-83872963|G/C|missense_variant'] 110088 15565 TELVHQLQV True PC9_epitope_Rep5 1065.58185888933 1065.5807699358602 64.88 2 -0.33294142172609126 0.08807986948503334 0.7964622801727129 ['nc|ENSG00000106948|Q7Z591-6|AKNA'] 47321 8156 IVEMIHFK True NCI_RA007_Epitope_Rep2 1015.55247333735 1015.55136993586 36.36 2 -0.3329779316383029 0.08808823007908081 0.7965020619371956 ['ENSG00000113739|ENST00000265087|STC2'] 47814 19431 IYGGTYML True PC9_epitope_Rep4 916.4364405255999 916.43589496793 82.855 1 -0.3329829467952614 0.08808823007908081 0.7965075267924331 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENST00000471972.1_1_X:153668686-153669692:+|nuORF', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 60936 20669 LICSCFYPEP True PC9_epitope_Rep3 1170.5089538428601 1170.5078499358601 84.776 2 -0.3330288433331193 0.08808823007908081 0.7965575417183355 ['nc|ENSG00000104435|Q93045-2|STMN2', 'ENSG00000104435|ENST00000220876|STMN2', 'STMN2|p.E82Rfs*22|1|0.14|ENSG00000104435|chr8:79641505-79641505|G/-|frameshift_variant'] 36456 5569 GVGERRWR True NCI_RA007_Epitope_Rep5 1014.5471451464598 1014.54604993586 28.106 2 -0.33306906548677395 0.08808823007908081 0.7966013774467468 ['ENST00000472593.1_1_3:183521362-183521560:+|nuORF'] 17068 7687 EGHYQPGQEK True NCI_RA007_Epitope_Rep1 1171.5258005651897 1171.52470993586 33.894 2 -0.3331101144702125 0.08808823007908081 0.7966461184809697 ['ENST00000463950.1_1_1:44679400-44680044:+|nuORF'] 20222 11923 ENLEDEYEP True H1975_Epitope_Rep3 1136.45096385908 1136.44986993586 51.014 2 -0.3331191002017539 0.08808823007908081 0.7966559129767488 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'nc|ENSG00000146143|P49643-2|PRIM2'] 97665 8781 SEHGLVVIA True H1975_Epitope_Rep1 923.5076313199099 923.50652993586 38.704 2 -0.3331495006816805 0.08810283687943263 0.7966890511655548 ['ENSG00000139684|ENST00000378720|ESD'] 106543 8480 STLTFLQQHG True NCI_RA007_Epitope_Rep5 1130.57202248162 1130.57092993586 39.301 2 -0.33319602887287036 0.08810283687943263 0.7967397739285323 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant', 'ABCA13|p.V1886Wfs*4|1|0.45|ENSG00000179869|chr7:48275317-48275317|G/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-2|ABCA13'] 99763 21443 SIIPPLFTV True PC9_epitope_Rep6 985.58481901145 985.58427496793 95.357 1 -0.333257892075502 0.08816906902115136 0.7968072225609508 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 118763 13193 VAAAALGEAA True PC9_epitope_Rep1 842.4497820906199 842.44923496793 55.61 1 -0.33330209835076746 0.08816906902115136 0.7968554259338284 ['ENST00000334371.3_1_1:152749031-152749076:+|nuORF'] 4835 8618 ALEKEKEKEEK True NCI_RA007_Epitope_Rep1 1359.7245599413898 1359.72346993586 37.522 2 -0.33330646654913215 0.08816906902115136 0.7968601893659487 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 6081 21292 APLNLGMIAA True PC9_epitope_Rep5 969.5317378927699 969.53064993586 86.953 2 -0.3334306897227101 0.08822069356783206 0.7969956721071503 ['ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 124425 11925 VGVFTREEVR True PC9_epitope_Rep2 1190.64077074778 1190.6391149037902 51.193 3 -0.3335628633889668 0.08823685843453595 0.7971398680114721 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 107593 17905 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 73.663 2 -0.3336016341378792 0.08825302272807857 0.797182173458048 ['ENSG00000115919|ENST00000264170|KYNU'] 22085 5896 ESPDLGWRIR True PC9_epitope_Rep1 1227.63601972051 1227.6343649037901 27.495 3 -0.33363608446403126 0.08826605683490223 0.7972197677025268 ['ENST00000291294.6_1_19:47127418-47128351:-|nuORF'] 57088 11186 LDSMENIPPP True H1975_Epitope_Rep2 1111.52196105471 1111.5208699358602 48.065 2 -0.3336395003902963 0.08826605683490223 0.7972234955237245 ['ENST00000338154.10_1_X:53964145-53964379:-|nuORF'] 59954 18291 LGGVGSLSL True PC9_epitope_Rep3 801.4596184983301 801.4590749679301 75.562 1 -0.3336542290889501 0.08826605683490223 0.7972395693715085 ['ENST00000409106.5_2_2:114513945-114514152:-|nuORF'] 53534 18399 KRLYYREKKYK True NCI_RA007_Epitope_Rep2 1573.90928144965 1573.90818993586 76.33 2 -0.3337937486875735 0.08827908955541375 0.7973918575185802 ['ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4', 'nc|ENSG00000135124|Q99571-2|P2RX4'] 27459 6568 FM[Oxidation]C[Carbamidomethyl]QGGDFTR True NCI_RA007_Epitope_Rep2 1233.4906786696397 1233.48958993586 30.16 2 -0.33382318579779974 0.08827908955541375 0.7974239947497915 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000289549|F5H284|PPIAL4D', 'nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000279782|ENST00000581138|PPIAL4F', 'ENSG00000271567|ENST00000581164|PPIAL4E', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A', 'ENST00000428093.1_1_2:68352508-68352655:+|nuORF'] 118834 14691 VAANPLLL True NCI_RA007_Epitope_Rep4 809.50108938749 809.5005449679301 63.925 1 -0.33383195277236183 0.08827908955541375 0.7974335662853823 ['ENSG00000157570|ENST00000520358|TSPAN18'] 121739 19829 VFLSGFSLF True NCI_RA007_Epitope_Rep1 1015.53786881903 1015.53676993586 81.339 2 -0.3338466013885674 0.08829525109460586 0.7974495596507275 ['ENST00000532094.5_1_11:420655-431830:-|nuORF', 'ENST00000528927.5_1_11:418373-431830:-|nuORF', 'ENSG00000185101|ENST00000332826|ANO9'] 33513 17683 GLDQSLVSL True PC9_epitope_Rep6 930.5022115863 930.50110993586 80.653 2 -0.3338984359489412 0.08830828133862734 0.7975061568540571 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 133594 18336 VWYERYKFDIP True PC9_epitope_Rep5 1514.7558005000196 1514.75416490379 75.544 3 -0.33390333795355803 0.08830828133862734 0.7975115096021081 ['ENSG00000164241|ENST00000296662|C5orf63'] 70727 16174 LWRRHCKKYWL True PC9_epitope_Rep4 1587.86089178859 1587.8592449037899 70.156 3 -0.33393579608348 0.08830828133862734 0.7975469537622432 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 80685 17369 PGVNQPFLI True PC9_epitope_Rep1 983.5440168286299 983.54290993586 71.619 2 -0.3339761075299542 0.08832444121452754 0.7975909772873794 ['ENSG00000171408|ENST00000308191|PDE7B', 'nc|ENSG00000205268|Q13946-3|PDE7A', 'nc|ENSG00000205268|Q13946-2|PDE7A', 'ENSG00000205268|ENST00000401827|PDE7A'] 4649 15941 ALAEATVAL True PC9_epitope_Rep2 857.4858332461699 857.48472993586 66.566 2 -0.3340217982631877 0.08837605019674571 0.797640880228365 ['MTIF2|p.F659Ifs*2|1|0.28|ENSG00000085760|chr2:55237324-55237325|-/T|frameshift_variant', 'ENSG00000085760|ENST00000263629|MTIF2'] 69560 4848 LVDENEVERP True H1975_Epitope_Rep3 1198.5829810881398 1198.58188993586 23.773 2 -0.3340357516425292 0.0883922082986228 0.7976561209739477 ['ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 131962 5167 VTSASEMLLP True NCI_RA007_Epitope_Rep2 1046.53179746242 1046.5307099358602 24.719 2 -0.33416471634761524 0.08839896501612732 0.7977970065454224 ['ENSG00000175820|ENST00000322527|CCDC168'] 94289 18096 RRRHAFRRQA True NCI_RA007_Epitope_Rep4 1352.77625064784 1352.77514993586 78.302 2 -0.3341651519970847 0.08839896501612732 0.7977974825323689 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 125335 12826 VIPPSSGLP True PC9_epitope_Rep1 865.49091862661 865.48982993586 54.21 2 -0.3342050009175739 0.08839896501612732 0.7978410230649199 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 14222 20447 DSGDLVLLNV True PC9_epitope_Rep5 1043.54989005471 1043.5487899358602 83.685 2 -0.33421397467369274 0.08839896501612732 0.79785082867999 ['KIF17|p.W795L|1|0.25|ENSG00000117245|chr1:20682732-20682732|C/A|missense_variant'] 111727 7613 TIGSPAGVTG True PC9_epitope_Rep1 858.44469671018 858.44358993586 34.103 2 -0.3342142695209366 0.08839896501612732 0.7978511508625963 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 27389 9398 FLVPDHTIK True NCI_RA007_Epitope_Rep2 1068.59678067748 1068.59568993586 41.165 2 -0.3342584755905836 0.08839896501612732 0.7978994576574838 ['ENSG00000141034|ENST00000268719|GID4'] 37812 12916 GYGGGFGNF True NCI_RA007_Epitope_Rep3 874.36096708622 874.35986993586 58.07 2 -0.33426472301875354 0.08839896501612732 0.7979062850005457 ['GCA|p.L101Ffs*3|1|0.09|ENSG00000115271|chr2:162356475-162356476|-/T|frameshift_variant', 'ENST00000481161.5_1_2:163200677-163213018:+|nuORF', 'ENST00000479199.1_1_2:163200728-163213435:+|nuORF', 'ENSG00000115271|ENST00000437150|GCA', 'ENST00000487445.6_1_2:163200677-163215720:+|nuORF'] 82511 5732 PPRPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 27.042 2 -0.3344213551722601 0.08843127525342029 0.7980774870956971 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 4419 4872 AIQEVEMLPRP True NCI_RA007_Epitope_Rep1 1281.6751076511698 1281.6734549037901 23.03 3 -0.33445878893159153 0.08843127525342029 0.7981184116470567 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'DMD|p.H1690Tfs*31|1|0.14|ENSG00000198947|chrX:32364668-32364668|G/-|frameshift_variant', 'DMD|p.G1635Efs*4|1|0.07|ENSG00000198947|chrX:32365141-32365141|C/-|frameshift_variant', 'DMD|p.E899Rfs*50|1|0.08|ENSG00000198947|chrX:32485027-32485027|C/-|frameshift_variant', 'DMD|p.E827Sfs*19|1|0.14|ENSG00000198947|chrX:32491420-32491420|C/-|frameshift_variant'] 12917 4803 DLKKIQFPKKE True NCI_RA007_Epitope_Rep2 1372.8078360728798 1372.8061949037901 23.31 3 -0.3345110410628981 0.08844742951319357 0.7981755420150157 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5', 'ENST00000532042.5_1_11:65479717-65480742:+|nuORF', 'ENST00000527544.5_1_11:65480238-65482390:+|nuORF'] 73686 21164 MYPDVFAHF True PC9_epitope_Rep5 1125.4953523840497 1125.4942499358601 86.461 2 -0.33463081337124284 0.08848130427077795 0.7983065207451339 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 121363 19341 VEVMKTALGP True PC9_epitope_Rep6 1043.5685173243098 1043.56740993586 87.043 2 -0.3346819005500557 0.08849588885738588 0.7983623982267737 ['ENSG00000232070|ENST00000556585|TMEM253'] 17969 7327 EIDIEGELQK True H1975_Epitope_Rep1 1172.5924831426798 1172.5913899358602 33.192 2 -0.3346956299835377 0.08849588885738588 0.7983774160850665 ['ENSG00000035687|ENST00000366535|ADSS2'] 68704 5512 LTKPEQQQEEP True NCI_RA007_Epitope_Rep5 1325.6463096206899 1325.64466490379 27.89 3 -0.33476049305439454 0.08852976095546931 0.7984483721929078 ['ENSG00000123576|ENST00000372588|ESX1'] 95571 11341 RWSQPWRWRYW True NCI_RA007_Epitope_Rep1 1705.8378478448897 1705.8361949037903 48.086 3 -0.33482336506758825 0.08854591203884184 0.798517159687919 ['ENST00000380009.8_1_5:94890875-94891094:+|nuORF'] 39693 3523 HLSHFGIDMLK True NCI_RA007_Epitope_Rep2 1296.66487732064 1296.66322490379 18.353 3 -0.334862214426467 0.08857821248848254 0.7985596689469946 ['ENST00000535080.1_1_12:6966027-6967782:+|nuORF', 'ENST00000537267.5_1_12:6966716-6975238:+|nuORF', 'nc|ENSG00000111667|P45974-2|USP5', 'ENSG00000111667|ENST00000229268|USP5'] 27388 9359 FLVPDHTIK True NCI_RA007_Epitope_Rep1 1068.59678067748 1068.59568993586 40.398 2 -0.3348995283330456 0.08857821248848254 0.7986005014437283 ['ENSG00000141034|ENST00000268719|GID4'] 45563 14120 IQRWYRRYVAR True H1975_Epitope_Rep3 1565.8691479731701 1565.8680499358602 59.643 2 -0.3349551665393097 0.08859279209043552 0.7986613922365556 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 4383 12496 AINELMQMRLR True H1975_Epitope_Rep1 1373.7271603073698 1373.72606993586 53.106 2 -0.3349729371466186 0.08859279209043552 0.7986808420265619 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68'] 115668 10218 TRYQIPKEV True PC9_epitope_Rep3 1132.6240580544797 1132.62241490379 44.255 3 -0.33498140332501913 0.08860109134717596 0.7986901084523085 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 26488 20680 FIEKLTATI True PC9_epitope_Rep1 1034.60119735158 1034.60010993586 84.37 2 -0.33499406295443446 0.08860109134717596 0.7987039650189641 ['ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 98124 4075 SESKARELYLQ True NCI_RA007_Epitope_Rep2 1322.68302948258 1322.6813849037899 20.489 3 -0.33500247687113444 0.08860109134717596 0.7987131746584614 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 100281 15121 SIYWTKAF True PC9_epitope_Rep4 1014.5174677276199 1014.51636993586 66.09 2 -0.3350033702591992 0.08860109134717596 0.7987141525459432 ['ENST00000610032.1_1_10:13681141-13681339:+|nuORF'] 82800 19713 PRRKQRMKIMK True NCI_RA007_Epitope_Rep3 1470.8751619537395 1470.87406993586 85.95 2 -0.33503729831380546 0.08860109134717596 0.798751291001977 ['ENST00000339526.8_1_1:182359866-182360031:-|nuORF'] 52733 13319 KMKMWAQVEP True NCI_RA007_Epitope_Rep1 1246.6202356273398 1246.6191299358602 55.809 2 -0.3350774627679423 0.08860109134717596 0.7987952594437409 ['ENST00000380033.8_1_X:18219997-18221692:-|nuORF'] 68576 13853 LTGTWTSV True PC9_epitope_Rep6 863.43888305375 863.43778993586 65.105 2 -0.33526551438830154 0.08866567460317461 0.7990011714242512 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 109960 9328 TEHFLTAVA True H1975_Epitope_Rep2 987.5025459394699 987.50144993586 40.841 2 -0.33531832366482567 0.08866567460317461 0.7990590110512482 ['ENSG00000130119|ENST00000360845|GNL3L'] 5754 6378 APASLTSA True PC9_epitope_Rep4 716.3704691407601 716.36992496793 31.619 1 -0.33531848124854147 0.08866567460317461 0.7990591836552545 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 120021 9007 VDRSTGIGI True PC9_epitope_Rep3 916.4977949121999 916.49668993586 39.589 2 -0.3353209824285785 0.08866567460317461 0.7990619232460989 ['ENST00000571240.1_1_17:7946036-7951880:+|nuORF', 'nc|ENSG00000179593|O15296-3|ALOX15B', 'ENSG00000179593|ENST00000380183|ALOX15B'] 3014 19014 AFLSLNIAV True PC9_epitope_Rep3 946.5487678559 946.54766993586 78.359 2 -0.33539572555084585 0.08868181898705026 0.7991437974927355 ['ENSG00000149516|ENST00000278865|MS4A3', 'nc|ENSG00000149516|Q96HJ5-3|MS4A3', 'nc|ENSG00000149516|Q96HJ5-2|MS4A3'] 133483 11200 VWDWWHRRRRR True NCI_RA007_Epitope_Rep2 1707.90832744655 1707.9072299358602 48.149 2 -0.3354111400586899 0.08869639156082267 0.7991606842758188 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 17028 7951 EGEAQRYFD True H1975_Epitope_Rep1 1113.47270236317 1113.4716099358602 35.531 2 -0.33542141686955923 0.08869639156082267 0.7991719429524127 ['ENSG00000176853|ENST00000334705|FAM91A1'] 32918 14205 GHYEVVQYL True PC9_epitope_Rep6 1106.53965972418 1106.53856993586 66.526 2 -0.3354593150388219 0.0887109631020495 0.7992134640825561 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1'] 64078 10234 LPAVVTADLR True H1975_Epitope_Rep1 1053.61824439805 1053.6171499358602 44.308 2 -0.3354692477854513 0.0887109631020495 0.7992243469182397 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB', 'ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 75433 9228 NIVSEKTI True PC9_epitope_Rep5 902.50729696674 902.50618993586 40.442 2 -0.3354997521758422 0.08874167493269094 0.7992577705361569 ['ENSG00000255223|ENST00000528616|OR5M11'] 17717 8370 EHNSKLTI True PC9_epitope_Rep6 940.4977949122 940.49668993586 41.853 2 -0.33550548932249813 0.08874167493269094 0.799264056958185 ['ENSG00000068654|ENST00000263857|POLR1A', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF'] 31265 9844 GDFC[Carbamidomethyl]IQVGR True NCI_RA007_Epitope_Rep1 1050.49166426537 1050.49056993586 42.292 2 -0.33553030314823956 0.08874167493269094 0.7992912473324203 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF'] 23138 17144 EVKKYVLP True PC9_epitope_Rep3 974.5800679841799 974.57896993586 71.1 2 -0.3356101040274723 0.0887755282781586 0.7993787007072318 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'CON__P01030', 'CON__ENSEMBL:ENSBTAP00000007350'] 47084 21333 ITTDVLYTI True PC9_epitope_Rep2 1037.5644774896898 1037.5639749679299 87.523 1 -0.33562777163155666 0.08879166814269014 0.7993980645112455 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 93085 7355 RPNDSRMLVA True PC9_epitope_Rep5 1157.59752603681 1157.59588490379 33.249 3 -0.3356699969242693 0.08880623450230252 0.7994443465784478 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 12636 9750 DLCFYYYFYFF True NCI_RA007_Epitope_Rep2 1589.65772625153 1589.65662993586 42.546 2 -0.33567199516798824 0.08880623450230252 0.7994465369031396 ['ENST00000557252.1_1_12:56743718-56743955:-|nuORF'] 57624 10513 LEEEEEEDP True PC9_epitope_Rep1 1117.4298940613298 1117.42878993586 45.328 2 -0.33567441516937147 0.08882079982997414 0.7994491895390818 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 85985 9325 QHLDPQGAQEL True PC9_epitope_Rep2 1234.59421447818 1234.5931099358602 41.207 2 -0.3357001756028998 0.08882079982997414 0.799477427147436 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 95984 13623 RYLEVMRKL True PC9_epitope_Rep5 1206.6906981456598 1206.68905490379 57.424 3 -0.3358078637273066 0.08890463118746125 0.7995954871031398 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 130595 13621 VSSGQNLLAV True PC9_epitope_Rep4 986.5396597241798 986.53856993586 60.287 2 -0.33586483634044795 0.08890463118746125 0.7996579575839974 ['ENSG00000169410|ENST00000618819|PTPN9'] 107654 11445 SVQKLVVVI True PC9_epitope_Rep4 983.6379172134698 983.63682993586 51.791 2 -0.3358944840957745 0.08890463118746125 0.7996904692555628 ['ENSG00000164109|ENST00000296509|MAD2L1'] 510 5501 AAPAEEPAAAA True PC9_epitope_Rep6 967.4610750503098 967.45996993586 29.138 2 -0.3359397557746697 0.08892076647894308 0.7997401179180674 ['ENSG00000277443|ENST00000612661|MARCKS'] 93498 3736 RQKNKNVEI True NCI_RA007_Epitope_Rep4 1127.64110510095 1127.63944490379 20.516 3 -0.3360373905221463 0.08896601795611907 0.7998472079504887 ['KBTBD12|p.L574Ffs*21|1|0.23|ENSG00000187715|chr3:127984125-127984126|-/T|frameshift_variant', 'ENSG00000187715|ENST00000405109|KBTBD12'] 36340 6169 GVEQRWETMP True PC9_epitope_Rep1 1231.56555720219 1231.5639149037902 28.544 3 -0.3360533653245658 0.08896601795611907 0.7998647318460037 ['ENST00000594286.5_1_19:53625810-53636169:-|nuORF'] 55462 10136 LAGAGALG True PC9_epitope_Rep3 628.3544251538 628.3538749679301 43.939 1 -0.33608406922416345 0.08896601795611907 0.7998984147409112 ['ENST00000479126.1_1_3:48481673-48481955:+|nuORF'] 128803 13351 VQAEKKIEV True PC9_epitope_Rep1 1042.60225998074 1042.60116993586 56.215 2 -0.3360856900267396 0.08896601795611907 0.7999001928578746 ['ENSG00000075539|ENST00000358350|FRYL', 'ENST00000302806.5_1_4:48621203-48655803:-|nuORF'] 87448 5056 QPYRYTVKA True PC9_epitope_Rep2 1124.59784330664 1124.5961849037901 24.82 3 -0.3361156224908532 0.08896601795611907 0.7999330316108477 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 32352 8078 GFGGDDAPR True H1975_Epitope_Rep3 890.38824446322 890.38714993586 36.046 2 -0.3361568291878992 0.08899985833687492 0.7999782425444768 ['ENSG00000169067|ENST00000423391|ACTBL2'] 5123 19181 ALLMDKSP True PC9_epitope_Rep2 873.46298962661 873.46188993586 79.153 2 -0.3361851191992696 0.08901598994209622 0.800009283816266 ['ENSG00000188315|ENST00000343010|C3orf62'] 91383 12428 RHERTKFR True PC9_epitope_Rep5 1128.62645809632 1128.6248249037899 52.803 3 -0.3362283699018114 0.0890450980044974 0.8000567441859147 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1', 'LUZP1|p.E483*|1|0.04|ENSG00000169641|chr1:23092808-23092815|CTGTGCTC/-|frameshift_variant'] 105173 4667 SRFWRKWLCSK True NCI_RA007_Epitope_Rep2 1495.78705814199 1495.78540490379 22.78 3 -0.3362300204209022 0.0890450980044974 0.8000585554354734 ['ENST00000508941.5_1_5:35856265-35860978:+|nuORF'] 48230 19882 IYQEVWNLF True NCI_RA007_Epitope_Rep4 1210.60225998074 1210.60116993586 85.94 2 -0.3362418219335818 0.0890450980044974 0.8000715063769929 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 73919 4810 NCAYLGGEK True NCI_RA007_Epitope_Rep1 953.4276667470499 953.42656993586 22.791 2 -0.3362425394022935 0.0890450980044974 0.8000722937348101 ['ENSG00000167311|ENST00000397068|ART5'] 69964 12550 LVLKKQQA True PC9_epitope_Rep1 926.59130137422 926.59020993586 53.143 2 -0.3362957345611474 0.08906122738057297 0.8001306738574917 ['ENSG00000164754|ENST00000297338|RAD21'] 71268 14367 LYPRYPLKP True PC9_epitope_Rep3 1145.65971528721 1145.65807490379 60.355 3 -0.3363663056374393 0.08909348441926346 0.800208133231002 ['ENST00000463092.5_1_1:45478988-45479057:+|nuORF'] 7779 13481 ASSICVLPST True PC9_epitope_Rep6 976.48993265044 976.4888299358599 63.548 2 -0.336496255701994 0.08909348441926346 0.8003507962679649 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 109198 11062 TAQDEVYLH True NCI_RA007_Epitope_Rep5 1074.4981888350198 1074.49708993586 49.185 2 -0.33656808205891847 0.08912573917354201 0.8004296653395981 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant'] 115658 8239 TRWSPIRAEER True H1975_Epitope_Rep3 1399.7320453636696 1399.7303849037899 36.674 3 -0.33661293524409736 0.08912573917354201 0.8004789222127413 ['FRMD7|p.P506T|1|0.29|ENSG00000165694|chrX:132078501-132078501|G/T|missense_variant'] 117697 10721 TVTVENSQGF True PC9_epitope_Rep2 1080.5087535187197 1080.5076499358602 46.554 2 -0.33688431935258634 0.08920794533158659 0.8007770445335094 ['CON__P01030', 'CON__ENSEMBL:ENSBTAP00000007350'] 66599 5293 LSISGGSAVV True H1975_Epitope_Rep2 888.4916469026 888.49054993586 25.415 2 -0.33689138670114677 0.08920794533158659 0.8007848103339553 ['ENSG00000161509|ENST00000293190|GRIN2C'] 140117 8006 YQNTIVAGSL True PC9_epitope_Rep4 1064.5502244078798 1064.54912993586 38.245 2 -0.33701424155978593 0.08920794533158659 0.8009198239422424 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A'] 6545 13425 APTPGLLQ True PC9_epitope_Rep5 795.4490538146299 795.44794993586 56.655 2 -0.3370435996712959 0.08920794533158659 0.8009520923978252 ['ENSG00000021762|ENST00000263650|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5', 'ENST00000498536.5_1_11:3109437-3111932:-|nuORF'] 120236 14010 VECLEEVP True PC9_epitope_Rep2 916.42118438428 916.42008993586 59.166 2 -0.33708967297441317 0.08924177244321703 0.8010027368012272 ['ENST00000584483.5_1_17:61912248-61912488:-|nuORF'] 66483 5062 LSHDERQSR True NCI_RA007_Epitope_Rep3 1126.5479329921 1126.5462749037902 26.905 3 -0.33721612267387363 0.08928855923952488 0.8011417554252179 ['ENST00000452649.1_1_22:30793095-30805128:+|nuORF'] 4814 7891 ALEEGQPPFKW True H1975_Epitope_Rep1 1300.6451874218797 1300.6440899358602 35.304 2 -0.3372512561964451 0.08928855923952488 0.8011803872394737 ['ENST00000222990.7_1_7:2293201-2294050:-|nuORF'] 130469 15317 VSPGLTPSL True PC9_epitope_Rep6 869.48583324617 869.48472993586 71.038 2 -0.3372540736255286 0.08928855923952488 0.8011834853177515 ['ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 37832 19330 GYILTYQF True NCI_RA007_Epitope_Rep5 1003.5014833103099 1003.50038993586 81.231 2 -0.3372708224743424 0.08928855923952488 0.8012019028988119 ['ENSG00000120332|ENST00000239462|TNN', 'TNN|p.W1260*|1|0.16|ENSG00000120332|chr1:175146950-175146950|G/-|frameshift_variant'] 14496 14555 DTIDIVRDAV True NCI_RA007_Epitope_Rep2 1115.58225281215 1115.5811499358601 61.279 2 -0.33728981646561346 0.08930468030871627 0.8012227900348334 ['nc|ENSG00000110697|O00562-2|PITPNM1', 'ENSG00000110697|ENST00000356404|PITPNM1'] 119307 8301 VAMEAVAA True H1975_Epitope_Rep2 760.3789256494799 760.37782993586 36.882 2 -0.33741047894758025 0.08935145851033702 0.8013554969384546 ['GLI2|p.V1154*|1|0.27|ENSG00000074047|chr2:120989372-120989372|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000074047|P10070-4|GLI2', 'nc|ENSG00000074047|P10070-3|GLI2', 'ENST00000452692.5_1_2:121728002-121748192:+|nuORF', 'ENST00000438299.5_1_2:121728002-121748192:+|nuORF', 'nc|ENSG00000074047|P10070-2|GLI2', 'nc|ENSG00000074047|P10070-1|GLI2'] 137309 6371 YDEKKTYD True NCI_RA007_Epitope_Rep5 1060.47130538084 1060.47020993586 31.18 2 -0.33741629457126826 0.08935145851033702 0.8013618938524393 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 86604 13153 QLEIFHLVMYR True NCI_RA007_Epitope_Rep1 1447.7645913619099 1447.7634899358602 55.158 2 -0.33741647117439055 0.08935145851033702 0.8013620881087318 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 56030 20153 LASNVIC[Carbamidomethyl]P True PC9_epitope_Rep5 872.44258881463 872.44203496793 82.567 1 -0.3374242298057193 0.08935145851033702 0.8013706223545727 ['ENSG00000174914|ENST00000642097|OR9G1'] 109803 5494 TEEDPVKPP True H1975_Epitope_Rep3 1010.4920408254198 1010.49094993586 26.187 2 -0.3374268988996563 0.08936757703948882 0.8013735583018202 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 79592 10093 PDISSCGSCC True H1975_Epitope_Rep1 970.3194388210201 970.3183499358599 43.759 2 -0.3374331573059811 0.08938369499805303 0.8013804424763727 ['ENST00000354755.5_1_11:86085825-86086272:+|nuORF'] 136962 9442 YAGSGNVL True PC9_epitope_Rep6 779.38136817763 779.38026993586 46.55 2 -0.33745562084006975 0.0894175118143684 0.8014051527861136 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 58768 10966 LESFQLWIAFP True H1975_Epitope_Rep2 1349.7019740220098 1349.70086993586 47.21 2 -0.3374886952391571 0.089432045450523 0.8014415371870829 ['OR52R1|p.M289Nfs*10|1|0.21|ENSG00000279270|chr11:4803515-4803516|-/T|frameshift_variant', 'ENSG00000279270|ENST00000624978|OR52R1'] 56605 16129 LDHRLRRRMYF True PC9_epitope_Rep4 1561.84121897317 1561.8395849037902 69.979 3 -0.33750153775430974 0.089432045450523 0.8014556655708032 ['OR6Q1|p.P60R|1|0.21|ENSG00000279051|chr11:58031131-58031131|C/G|missense_variant'] 131198 13609 VTENALKDL True PC9_epitope_Rep3 1001.5393253710099 1001.53822993586 57.411 2 -0.3375346971075556 0.08944657805780223 0.8014921466423839 ['ENSG00000131409|ENST00000652263|LRRC4B'] 3486 13775 AGLHQSSPVAL True PC9_epitope_Rep1 1078.5771078620598 1078.5760099358602 57.832 2 -0.3375494380667438 0.08944657805780223 0.8015083650118962 ['ENST00000369872.3_1_1:110009314-110019415:+|nuORF'] 110112 11515 TEMLPPPPP True H1975_Epitope_Rep2 977.4892043744499 977.48810993586 49.35 2 -0.3376387094043182 0.08947722365766467 0.8016065933137724 ['ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.A1643Hfs*5|1|0.12|ENSG00000155816|chr1:240438076-240438076|G/-|frameshift_variant'] 55181 19147 LAASDTCFYI True PC9_epitope_Rep1 1102.50049733414 1102.49940993586 78.441 2 -0.3376530932104603 0.08947722365766467 0.8016224218711702 ['nc|ENSG00000107147|Q5JUK3|KCNT1', 'nc|ENSG00000107147|Q5JUK3-4|KCNT1', 'ENSG00000107147|ENST00000371757|KCNT1', 'nc|ENSG00000107147|Q5JUK3-2|KCNT1'] 85001 6349 QEFTRFVAK True PC9_epitope_Rep5 1124.5978433066398 1124.5961849037901 29.397 3 -0.3376641747483453 0.08947722365766467 0.801634616766458 ['INO80|p.P591A|1|0.43|ENSG00000128908|chr15:41069581-41069581|G/C|missense_variant'] 62293 16635 LLFTNETA True PC9_epitope_Rep5 907.46509780159 907.46400993586 68.992 2 -0.3377312022074431 0.0895641247986975 0.8017083839218084 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.V3818D|1|0.28|ENSG00000086570|chr5:151517630-151517630|A/T|missense_variant'] 24071 17633 EYNSDLHQFF True PC9_epitope_Rep6 1298.5567663402996 1298.5556699358601 80.465 2 -0.3377614978989703 0.08958023642670064 0.8017417289626072 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF', 'BUB1|p.A283Cfs*3|1|0.26|ENSG00000169679|chr2:110666373-110666374|-/A|frameshift_variant'] 118478 20996 TYPNTYIF True PC9_epitope_Rep5 1017.48074786573 1017.47964993586 85.823 2 -0.3378396809545129 0.0895963474844715 0.8018277902031276 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 101910 17913 SLPTAPLAP True PC9_epitope_Rep3 865.49091862661 865.48982993586 74.104 2 -0.3379349182340301 0.08964784993806406 0.8019326413018615 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 21312 6321 ERERERELRDV True H1975_Epitope_Rep1 1485.7648020439299 1485.76315490379 29.378 3 -0.3380441071908619 0.08967848105745581 0.8020528755240259 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 107522 8438 SVPAQQSLVSA True NCI_RA007_Epitope_Rep3 1085.57168812845 1085.5705899358602 40.276 2 -0.3380824100126675 0.08967848105745581 0.8020950587780726 ['ENST00000302475.8_1_5:112362600-112362786:-|nuORF'] 61725 10498 LLAEAGCQLVP True H1975_Epitope_Rep3 1112.58998104488 1112.5888899358602 45.443 2 -0.3381218421302231 0.08967848105745581 0.8021384888852063 ['ENST00000216468.7_1_14:77807904-77808090:-|nuORF'] 44178 12444 IIWDAQAMP True H1975_Epitope_Rep2 1043.5110024481899 1043.5099099358602 52.954 2 -0.3382057214292465 0.08969458895141028 0.8022308832370996 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.E1748Rfs*44|1|0.18|ENSG00000122728|chr9:32630339-32630339|T/-|frameshift_variant', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 57419 7335 LEATGEVQA True H1975_Epitope_Rep2 916.4501760134398 916.44906993586 33.154 2 -0.3382352662060726 0.08971069627532513 0.8022634306945998 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF'] 68347 6308 LTELQEKYK True NCI_RA007_Epitope_Rep1 1150.62338934814 1150.6217549037901 28.562 3 -0.3382750516486289 0.08976219123787954 0.8023072624061564 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF'] 131285 11366 VTGAEEDRARF True H1975_Epitope_Rep1 1249.6051135150499 1249.6040099358602 48.697 2 -0.3384315953377766 0.08982661004953998 0.8024797581858965 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-4|NSFL1C', 'ENST00000478168.1_1_20:1444972-1447445:-|nuORF', 'ENST00000487086.1_1_20:1438843-1447469:-|nuORF', 'NSFL1C|p.G98Afs*35|1|0.39|ENSG00000088833|chr20:1455118-1455118|C/-|frameshift_variant'] 75855 10518 NLQEAEEWYK True NCI_RA007_Epitope_Rep5 1308.59863115228 1308.5975299358602 47.09 2 -0.33844338196048346 0.08982661004953998 0.8024927478978363 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 128562 15029 VPTFEQLA True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 62.962 2 -0.3384515128109118 0.08982661004953998 0.8025017088476079 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 107898 15012 SVVQGTLGV True PC9_epitope_Rep4 858.4810822188999 858.47998993586 65.681 2 -0.3385318926080029 0.08982661004953998 0.8025903020033419 ['ENSG00000163872|ENST00000305135|YEATS2'] 29222 5826 FTTTQGKA True NCI_RA007_Epitope_Rep2 852.4341320264798 852.43302993586 27.28 2 -0.3386126508582576 0.08989579094495852 0.8026793253809366 ['ENSG00000213967|ENST00000594466|ZNF726'] 66766 15810 LSLNNKTVP True PC9_epitope_Rep5 984.56039516876 984.55928993586 65.803 2 -0.3387453716094051 0.08991189271434132 0.8028256577004467 ['ENST00000367879.8_1_1:165877228-165877291:+|nuORF'] 842 11345 ADATALTLA True NCI_RA007_Epitope_Rep3 845.44944773745 845.4488949679301 51.74 1 -0.33878774733291794 0.08992640294388224 0.8028723867959932 ['ENSG00000125872|ENST00000378858|LRRN4'] 87678 12216 QQVFIEMTL True PC9_epitope_Rep2 1107.56343194387 1107.5623299358601 52.302 2 -0.3388016657180861 0.08992640294388224 0.8028877358339156 ['ENSG00000166866|ENST00000300119|MYO1A'] 13160 11770 DLRMLRMSP True H1975_Epitope_Rep2 1117.57361978809 1117.57252993586 50.347 2 -0.33881791972364805 0.08994250331711633 0.8029056610550459 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1', 'ALMS1|p.Y811*|1|0.24|ENSG00000116127|chr2:73448959-73448966|ACTCACAC/-|frameshift_variant', 'ALMS1|p.T1608Dfs*2|1|0.12|ENSG00000116127|chr2:73451340-73451341|-/A|frameshift_variant', 'ALMS1|p.A2503Cfs*22|1|0.17|ENSG00000116127|chr2:73454032-73454033|-/C|frameshift_variant', 'ALMS1|p.A2503Dfs*23|1|0.16|ENSG00000116127|chr2:73454034-73454035|-/ATTC|frameshift_variant'] 83416 11360 PTLLSMSPV True PC9_epitope_Rep3 943.50485443859 943.50374993586 48.701 2 -0.338888279546794 0.08995542032267195 0.8029832612304287 ['ENST00000609401.5_1_X:62647883-62647997:-|nuORF'] 60882 5765 LHYHVSCAI True H1975_Epitope_Rep3 1041.50658577409 1041.5054899358602 27.202 2 -0.338893341543774 0.08995542032267195 0.8029888445086933 ['ENST00000272645.8_1_2:128604394-128604487:-|nuORF'] 103443 9812 SPPSPSSPLP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 42.728 2 -0.33889685018965354 0.08995542032267195 0.8029927145024932 ['ENST00000575425.1_1_17:7239912-7245270:+|nuORF', 'ENST00000570457.6_1_17:7239900-7240612:+|nuORF'] 44750 7597 ILYNNHKFTNA True NCI_RA007_Epitope_Rep1 1333.67788453249 1333.6767899358601 33.544 2 -0.3389099174297255 0.089966744498691 0.8030071277239069 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.W489*|1|0.16|ENSG00000081237|chr1:198718109-198718109|G/-|frameshift_variant'] 61874 18833 LLCTVMELF True PC9_epitope_Rep1 1067.53952569515 1067.5384299358602 77.226 2 -0.3389448011009592 0.089966744498691 0.8030456062151764 ['ENST00000417581.1_1_10:30637795-30637855:-|nuORF'] 133584 18447 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 77.78 2 -0.33897160144782285 0.089966744498691 0.8030751700142092 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 70373 17486 LVTAAILVAV True PC9_epitope_Rep5 968.6270181765999 968.62592993586 72.262 2 -0.3389870921337155 0.089966744498691 0.8030922586302014 ['nc|ENSG00000152291|O43493-6|TGOLN2', 'nc|ENSG00000152291|O43493-4|TGOLN2', 'ENSG00000152291|ENST00000377386|TGOLN2', 'nc|ENSG00000152291|O43493-5|TGOLN2', 'nc|ENSG00000152291|O43493-3|TGOLN2', 'nc|ENSG00000152291|O43493-7|TGOLN2'] 12394 4859 DITANLDSP True H1975_Epitope_Rep2 944.445090633 944.44398993586 23.777 2 -0.33899790635073224 0.08998284187996392 0.8031041886599081 ['ENST00000522601.5_1_8:8086126-8093767:+|nuORF', 'ENST00000459803.5_1_3:75472114-75480048:-|nuORF', 'ENST00000484945.5_1_3:75472114-75480048:-|nuORF'] 7062 12971 AQQQEKMLI True NCI_RA007_Epitope_Rep3 1087.5695799534699 1087.56848993586 58.294 2 -0.33906297860466567 0.08999575491722088 0.8031759799369361 ['PDE5A|p.E858Q|1|0.3|ENSG00000138735|chr4:119498657-119498657|C/G|missense_variant'] 111182 2689 THHKDHFTK True NCI_RA007_Epitope_Rep2 1149.5679401606901 1149.56629490379 14.685 3 -0.339063056597767 0.08999575491722088 0.8031760659881919 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF'] 61344 22238 LISGTLEII True PC9_epitope_Rep4 957.5746482505699 957.57354993586 93.776 2 -0.33908148245395353 0.08999575491722088 0.803196395916393 ['KLRD1|p.G17E|1|0.2|ENSG00000134539|chr12:10309430-10309430|G/A|missense_variant'] 136957 10060 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.38026993586 46.364 2 -0.3391632268613848 0.09000866658412777 0.8032865955620032 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 21061 14187 EQVLLLFKDS True NCI_RA007_Epitope_Rep1 1190.65468947642 1190.65358993586 59.219 2 -0.3391718714757613 0.09000866658412777 0.8032961350964988 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 12990 4834 DLLTDEPFSRQ True H1975_Epitope_Rep3 1319.63574493699 1319.63410490379 23.719 3 -0.33918298822044146 0.09000866658412777 0.8033084028990942 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2', 'ENST00000417788.5_1_22:22024636-22041216:+|nuORF'] 69421 8785 LTYEDNGY True H1975_Epitope_Rep2 973.4028914678499 973.40178993586 38.756 2 -0.33923805741183705 0.09002476123098692 0.8033691776565766 ['nc|ENSG00000215846|A8MV57|MPTX1'] 125442 13860 VITVHQISP True PC9_epitope_Rep4 992.5654805492 992.56438993586 61.214 2 -0.33929634709384526 0.09004085530853717 0.8034335129976761 ['ENSG00000172318|ENST00000392690|B3GALT1'] 91120 13856 RFVEKYTEL True PC9_epitope_Rep1 1183.62372370131 1183.62208490379 58.137 3 -0.3393481630972567 0.09004898579942348 0.8034907087602439 ['ENSG00000181610|ENST00000313608|MRPS23'] 15396 15072 EAILDIITSR True NCI_RA007_Epitope_Rep2 1129.63428838501 1129.6331899358602 63.312 2 -0.33937883141770414 0.09004898579942348 0.8035245636446854 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6', 'ENST00000520378.1_1_5:150518646-150537284:-|nuORF'] 133585 18633 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 78.486 2 -0.3394058505941168 0.09004898579942348 0.8035543917294986 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 7675 7387 ASKKAVLGP True H1975_Epitope_Rep2 869.5334521449299 869.53234993586 33.354 2 -0.33941418064249446 0.09004898579942348 0.8035635880521877 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF', 'GK|p.H427Qfs*69|1|0.06|ENSG00000198814|chrX:30720657-30720658|-/TCAG|frameshift_variant', 'nc|ENSG00000198814|P32189-1|GK', 'nc|ENSG00000198814|P32189-4|GK', 'nc|ENSG00000198814|P32189-2|GK', 'ENSG00000198814|ENST00000427190|GK', 'ENSG00000229894|ENST00000505354|GK3'] 103599 7751 SPSSTTLTSA True PC9_epitope_Rep5 950.4556553167 950.45454993586 34.756 2 -0.33941456074817966 0.09004898579942348 0.8035640076897419 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 3654 8308 AGPSLPPPAA True PC9_epitope_Rep2 876.4705175351999 876.46942993586 37.322 2 -0.3394235057855015 0.09004898579942348 0.8035738831120006 ['ENST00000455843.5_1_22:19705679-19706159:+|nuORF'] 46475 4462 ISVEMDVTK True NCI_RA007_Epitope_Rep5 1020.5161473982799 1020.51504993586 23.809 2 -0.33944404979668147 0.09006189213085765 0.803596564516072 ['ENSG00000277586|ENST00000610854|NEFL'] 125433 8125 VITKTSLP True NCI_RA007_Epitope_Rep2 857.52221875489 857.52112993586 36.237 2 -0.33947349020064443 0.09006189213085765 0.8036290693072615 ['KIF17|p.P898H|1|0.19|ENSG00000117245|chr1:20671967-20671967|G/T|missense_variant'] 88404 10004 QSLWKYPAP True H1975_Epitope_Rep3 1088.5654805492 1088.5643899358602 43.516 2 -0.3394893935094957 0.09006189213085765 0.8036466286499574 ['ENSG00000167323|ENST00000526596|STIM1'] 63322 20445 LLSWSQCTV True PC9_epitope_Rep3 1035.50591706775 1035.50480993586 83.897 2 -0.339629081864863 0.09011334901239589 0.803800883777278 ['ENST00000570099.5_1_16:30103671-30103908:-|nuORF'] 136547 9621 WWFRWRLDRYV True NCI_RA007_Epitope_Rep2 1681.8629999635698 1681.8613649037902 42.038 3 -0.3396464134572313 0.09012943839298344 0.8038200253169613 ['ENSG00000127995|ENST00000297273|CASD1'] 94260 8923 RRQWRRRRRPQ True NCI_RA007_Epitope_Rep2 1649.9675736581698 1649.96646993586 39.332 2 -0.3396575812663304 0.09014552720456917 0.8038323596894578 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 76358 21639 NPYTLFVLV True PC9_epitope_Rep6 1064.5906326678798 1064.59007496793 96.119 1 -0.3396961215001234 0.09015842704575995 0.8038749275695376 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L'] 92687 4692 RNRKSWRKQGP True H1975_Epitope_Rep1 1411.79089765247 1411.78924490379 23.083 3 -0.33971446412893236 0.09015842704575995 0.8038951880860546 ['ENST00000542357.1_1_12:6747897-6752833:-|nuORF'] 115684 16221 TSAESFVNV True PC9_epitope_Rep4 952.45017601344 952.44906993586 70.337 2 -0.33972466758432357 0.09015842704575995 0.8039064586814897 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 6241 9351 APPYRRIS True PC9_epitope_Rep4 958.5348491272599 958.53374993586 43.576 2 -0.3398817446769103 0.09020987676149725 0.804079988726174 ['ENSG00000164451|ENST00000368596|CALHM4'] 133582 18797 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85398993586 81.319 2 -0.33991095809789773 0.0902436436931999 0.8041122672229019 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 133586 18858 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 79.383 2 -0.33995758074174537 0.0902501546892955 0.8041637848411091 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 126796 19347 VLPNRPFGLF True PC9_epitope_Rep5 1158.6549642599398 1158.65386993586 79.464 2 -0.3399594331958319 0.0902501546892955 0.8041658318710783 ['ENSG00000005187|ENST00000289416|ACSM3'] 9681 23177 AYFPYFITY True PC9_epitope_Rep2 1183.55899818643 1183.5579099358602 94.635 2 -0.33996474882476646 0.0902501546892955 0.8041717058724664 ['ENSG00000105677|ENST00000222284|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000392204.6_1_19:36036533-36036719:+|nuORF', 'ENST00000595180.5_1_19:36036641-36037580:+|nuORF', 'ENST00000596232.1_1_19:36036641-36037015:+|nuORF'] 2409 16555 AEQFAVGEI True PC9_epitope_Rep5 962.4709114580198 962.4703649679301 68.683 1 -0.34003525871961776 0.0902501546892955 0.8042496273790303 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 82652 18765 PQPDVFPLF True NCI_RA007_Epitope_Rep3 1058.54368247546 1058.5425899358602 82.059 2 -0.34004437447800384 0.0902501546892955 0.8042597020139394 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 67046 6813 LSPVHPSPPA True H1975_Epitope_Rep2 1000.5341804209198 1000.53308993586 31.125 2 -0.340076291713811 0.0902501546892955 0.8042949778097267 ['ENST00000355415.6_1_19:3544204-3544516:-|nuORF'] 20948 5874 EQPEKPSCP True H1975_Epitope_Rep2 1013.4487961144498 1013.44768993586 27.58 2 -0.3400773551319786 0.0902501546892955 0.8042961531610467 ['ENSG00000185477|ENST00000609438|GPRIN3', 'GPRIN3|p.G256Afs*8|1|0.08|ENSG00000185477|chr4:89249344-89249344|C/-|frameshift_variant'] 70664 26025 LWHIWRERN True PC9_epitope_Rep4 1308.68397297244 1308.68233490379 110.05 3 -0.3401516424078388 0.09027912814439004 0.8043782649650327 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 102094 8048 SLRGTGVL True PC9_epitope_Rep5 801.4708518883699 801.46974993586 35.895 2 -0.3401730111707897 0.09027912814439004 0.8044018863543273 ['ENSG00000163395|ENST00000335211|IGFN1'] 67034 14621 LSPSLCESLSF True PC9_epitope_Rep1 1181.5638258666902 1181.56272993586 61.062 2 -0.34018277968285315 0.09027912814439004 0.8044126849134356 ['ENST00000443035.7_1_15:65994691-65994772:-|nuORF'] 70647 26407 LWHIWRERN True PC9_epitope_Rep1 1308.68397297244 1308.68233490379 107.12 3 -0.34020278636310186 0.09027912814439004 0.8044348017625297 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 77860 7968 NVENKYSL True H1975_Epitope_Rep3 965.4818104948899 965.48070993586 35.62 2 -0.34021315509533756 0.09031129023704725 0.8044462644096771 ['ENSG00000163293|ENST00000295461|NIPAL1'] 80568 5085 PGPRRQQGWR True NCI_RA007_Epitope_Rep4 1236.6588208537598 1236.65716490379 26.068 3 -0.3402249598038237 0.09031129023704725 0.8044593147724624 ['ENST00000513574.1_1_4:156588948-156618002:+|nuORF'] 130738 20663 VSVYNSYPYYP True PC9_epitope_Rep1 1350.61321858726 1350.6121299358601 84.303 2 -0.340252074079743 0.09032417718386539 0.8044892911708457 ['nc|ENSG00000167034|Q99801-3|NKX3-1', 'nc|ENSG00000167034|Q99801-4|NKX3-1', 'nc|ENSG00000167034|Q99801-2|NKX3-1', 'nc|ENSG00000167034|Q99801-5|NKX3-1', 'ENSG00000167034|ENST00000380871|NKX3-1'] 107611 4237 SVPPAAEPVP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 21.41 2 -0.34026668299134594 0.09032417718386539 0.8045054427290644 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 9570 17264 AWNPKYELF True PC9_epitope_Rep5 1166.5760452329 1166.5744049037899 71.416 3 -0.34029665842003537 0.09032417718386539 0.8045385846830478 ['ENSG00000164363|ENST00000324642|SLC6A18'] 48775 4866 KDLESGAHLT True H1975_Epitope_Rep2 1069.5403880001697 1069.53928993586 23.804 2 -0.34035320907841515 0.09034025629695094 0.804601113705599 ['ENSG00000111012|ENST00000228606|CYP27B1'] 68574 15777 LTGTWTSV True PC9_epitope_Rep5 863.43888305375 863.43778993586 65.679 2 -0.3403618552695101 0.09034994697773065 0.8046106744635266 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 82505 5488 PPRPPPPPP True PC9_epitope_Rep3 950.5337864980999 950.53268993586 26.184 2 -0.3403814978056662 0.09034994697773065 0.8046323952347809 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 133587 19036 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 80.079 2 -0.3403856790502732 0.09034994697773065 0.804637018958021 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 137768 5074 YENSPELNP True NCI_RA007_Epitope_Rep1 1061.46655435357 1061.46544993586 23.821 2 -0.3404013277639225 0.09034994697773065 0.804654323975085 ['ENST00000589958.1_1_19:56853805-56854033:-|nuORF', 'ENSG00000137806|ENST00000260361|NDUFAF1'] 13835 19996 DQLLLVADL True PC9_epitope_Rep6 998.56481184286 998.56370993586 89.581 2 -0.340404357461883 0.09034994697773065 0.8046576743965173 ['ENSG00000215251|ENST00000380266|FASTKD5'] 127484 12930 VNLLREQL True PC9_epitope_Rep2 983.5763795860698 983.57528993586 55.029 2 -0.34047552447155116 0.09036602393029462 0.8047363799636278 ['CON__Q6IFU5', 'ENSG00000204889|ENST00000377755|KRT40', 'chr17:40981151-40982307|122|12.53|0.36|5.14|-|0|KRT40,KRT40|1'] 81551 9671 PLKEEEYRKLR True NCI_RA007_Epitope_Rep2 1459.8147123584697 1459.81360993586 42.236 2 -0.34050726934336734 0.09038210031458768 0.8047714904767823 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 84307 6145 PYSDSTAKL True PC9_epitope_Rep4 980.48147614172 980.48036993586 30.655 2 -0.3405579277025031 0.09041105573816845 0.8048275235124029 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF'] 58080 4336 LEIQQPLKY True H1975_Epitope_Rep3 1130.6335601090198 1130.63191490379 21.795 3 -0.34056102837515057 0.09041105573816845 0.804830953307081 ['ENST00000461745.5_2_3:77089697-77089820:+|nuORF'] 60751 6900 LHRRRWYWCRD True NCI_RA007_Epitope_Rep5 1645.81606685449 1645.8144149037898 33.222 3 -0.3405762677962586 0.09041105573816845 0.8048478105756451 ['ENST00000399627.3_1_22:50905837-50906184:-|nuORF'] 7195 9181 AQYENPPHI True PC9_epitope_Rep4 1067.50360856863 1067.5025099358602 42.909 2 -0.3406157755156651 0.09041105573816845 0.8048915144736482 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000594774.5_1_19:8618146-8642307:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 60191 19810 LGPITTISI True PC9_epitope_Rep6 913.5484335027301 913.54788496793 88.857 1 -0.3406460683314829 0.09042553191489362 0.8049250266513907 ['SLC1A6|p.Q450P|1|0.09|ENSG00000105143|chr19:14954150-14954150|T/G|missense_variant'] 42832 7281 IEQELTSKQG True NCI_RA007_Epitope_Rep2 1131.57716743171 1131.57606993586 32.942 2 -0.34065526279377234 0.09042553191489362 0.8049351985810282 ['nc|ENSG00000141376|Q9H6U6-6|BCAS3', 'ENSG00000141376|ENST00000407086|BCAS3', 'nc|ENSG00000141376|Q9H6U6|BCAS3', 'nc|ENSG00000141376|Q9H6U6-7|BCAS3', 'nc|ENSG00000141376|Q9H6U6-3|BCAS3', 'nc|ENSG00000141376|Q9H6U6-8|BCAS3'] 414 12337 AALGTMTSL True NCI_RA007_Epitope_Rep5 863.4422541820301 863.44170496793 54.103 1 -0.3407818576779961 0.09049461909558394 0.8050752673068959 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'ENST00000496783.1_1_21:43708308-43714771:+|nuORF', 'ENST00000472587.5_1_21:43696971-43716499:+|nuORF', 'nc|ENSG00000160179|P45844-8|ABCG1'] 43773 10628 IHLRESVNQDK True NCI_RA007_Epitope_Rep2 1337.7051619094898 1337.7040699358602 45.94 2 -0.3407986346543835 0.09050909155166016 0.8050938320634835 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.S1928Lfs*58|1|0.21|ENSG00000171467|chr6:43338204-43338216|TTCTAGAAGCTGA/-|frameshift_variant'] 98907 8469 SGYRKRGPK True H1975_Epitope_Rep1 1047.5937609857099 1047.5926699358602 37.505 2 -0.34080989836313835 0.09050909155166016 0.8051062963331075 ['ENSG00000100307|ENST00000216133|CBX7'] 142307 12681 YYDPHQATF True PC9_epitope_Rep3 1140.48762415132 1140.48652993586 53.802 2 -0.3408764766314315 0.0905251625671473 0.805179975588899 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 112567 10984 TLEKCCAAADP True H1975_Epitope_Rep2 1120.4892810274398 1120.4881899358602 47.276 2 -0.34090420055510173 0.09053803339517626 0.8052106587748252 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 5146 9806 ALLQETAY True H1975_Epitope_Rep3 907.46509780159 907.46454496793 42.745 1 -0.3409793288796833 0.09053803339517626 0.8052938131990055 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 21784 17526 ERWKEERDRKL True PC9_epitope_Rep3 1543.8219229972299 1543.8202649037903 72.598 3 -0.3410182242778796 0.09053803339517626 0.8053368678000112 ['ENSG00000180357|ENST00000326648|ZNF609'] 11957 4334 DHNDGLGNAF True NCI_RA007_Epitope_Rep5 1058.44173658806 1058.4406299358602 23.275 2 -0.3410497381145645 0.09055410276344618 0.8053717534699155 ['ENSG00000271447|ENST00000605424|MMP28'] 16314 13360 EEGMRREIFK True PC9_epitope_Rep1 1293.6499555324897 1293.6488499358602 56.249 2 -0.3411578201997288 0.09058623979645924 0.8054914131373766 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77'] 24303 19798 EYTSILHLF True PC9_epitope_Rep6 1121.57571087973 1121.57460993586 88.811 2 -0.3411765444399345 0.09058623979645924 0.805512145176091 ['ENSG00000198799|ENST00000361127|LRIG2'] 118711 4697 TYTFSTTKSVP True NCI_RA007_Epitope_Rep5 1230.61321858726 1230.6115649037902 24.753 3 -0.3412926712889559 0.09063444108761329 0.8056407380007509 ['ENSG00000075420|ENST00000415807|FNDC3B'] 58797 12377 LESLKRYRFGK True NCI_RA007_Epitope_Rep2 1395.7986683715096 1395.79756993586 52.748 2 -0.3413123116011809 0.09063444108761329 0.8056624889863717 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 48707 9850 KCMRSIRRW True NCI_RA007_Epitope_Rep4 1234.6539357974598 1234.6528299358602 44.734 2 -0.34131418618251536 0.09063444108761329 0.8056645650572897 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant', 'ACACB|p.R2183Dfs*8|1|0.32|ENSG00000076555|chr12:109260528-109260528|T/-|frameshift_variant', 'nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.S901Ffs*17|1|0.28|ENSG00000076555|chr12:109199474-109199475|-/T|frameshift_variant'] 118987 7759 VAEKAGTF True PC9_epitope_Rep1 821.42831837005 821.4272299358599 34.666 2 -0.34134341307938426 0.09064410133201427 0.8056969342007558 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'nc|ENSG00000196655|Q9Y296-2|TRAPPC4'] 38247 11905 HEDVNVGSI True PC9_epitope_Rep1 968.45632402304 968.45522993586 50.658 2 -0.3413843540594615 0.09064410133201427 0.8057422793280083 ['ENSG00000133302|ENST00000265140|SLF1'] 91127 11619 RFVEKYTEL True PC9_epitope_Rep4 1183.62372370131 1183.62208490379 52.451 3 -0.341448580027421 0.09064410133201427 0.8058134201304417 ['ENSG00000181610|ENST00000313608|MRPS23'] 36410 14871 GVFLYNKTKYD True H1975_Epitope_Rep1 1346.68705223386 1346.6859499358602 62.436 2 -0.3414573120276527 0.09064410133201427 0.805823092804599 ['ENSG00000127526|ENST00000595753|SLC35E1', 'nc|ENSG00000127526|Q96K37-2|SLC35E1'] 27193 9340 FLLPRLDTSNE True H1975_Epitope_Rep1 1303.67721582615 1303.67610993586 40.834 2 -0.34148801484600955 0.09064410133201427 0.8058571041957481 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 122324 5644 VGCPRDIP True NCI_RA007_Epitope_Rep2 855.4272728242299 855.42616993586 26.568 2 -0.3415139679792236 0.09065856416054267 0.8058858553364372 ['nc|ENSG00000113889|P01042-3|KNG1', 'nc|ENSG00000113889|P01042-2|KNG1', 'ENSG00000113889|ENST00000644859|KNG1'] 44974 10381 IPALICLHPLF True H1975_Epitope_Rep1 1235.71003660791 1235.7089299358602 44.879 2 -0.3415151903904832 0.09065856416054267 0.8058872095644443 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 46453 12316 ISTKQTAETI True PC9_epitope_Rep2 1090.58700383942 1090.5859099358602 52.686 2 -0.34155528748654135 0.09066982265244118 0.8059316318898043 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.W2883Lfs*11|1|0.24|ENSG00000181143|chr19:8972491-8972492|-/A|frameshift_variant', 'MUC16|p.T2979Lfs*26|1|0.59|ENSG00000181143|chr19:8972205-8972205|G/-|frameshift_variant', 'MUC16|p.A1487Cfs*12|1|0.29|ENSG00000181143|chr19:8976680-8976681|-/A|frameshift_variant', 'MUC16|p.S2365Qfs*9|1|0.2|ENSG00000181143|chr19:8974047-8974047|G/-|frameshift_variant', 'MUC16|p.W2468Lfs*16|1|0.1|ENSG00000181143|chr19:8973699-8973738|GCTGACCATGGTGCTGAAAGTTCTTACTGGTCTAGACCAG/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 80890 13004 PHVVRCVWLP True PC9_epitope_Rep3 1204.65391871412 1204.6522649037902 55.049 3 -0.3415781065298145 0.09066982265244118 0.8059569136300543 ['ENST00000442747.5_1_3:48538615-48541864:-|nuORF'] 89272 17276 QVVSFLHTV True PC9_epitope_Rep2 1028.5654805492 1028.5643899358602 71.71 2 -0.34158001698679696 0.09066982265244118 0.8059590303095587 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.L1613F|1|0.33|ENSG00000085224|chrX:77633683-77633683|C/A|missense_variant'] 2600 9670 AERLVGWMT True H1975_Epitope_Rep3 1061.5328005219299 1061.5317099358601 42.215 2 -0.3415992163472667 0.09066982265244118 0.8059803024744214 ['ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 53352 12074 KQQQQLVL True NCI_RA007_Epitope_Rep4 983.5763795860697 983.57528993586 53.441 2 -0.3416662036633144 0.09070354865490259 0.8060545268214088 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 7623 8373 ASGFEDLLK True NCI_RA007_Epitope_Rep2 978.5022115862998 978.50110993586 37.209 2 -0.3417092605337087 0.0907180075951603 0.8061022394174464 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'NLRP11|p.N1007Ifs*16|1|0.14|ENSG00000179873|chr19:55785709-55785709|A/-|frameshift_variant', 'ENSG00000179873|ENST00000589093|NLRP11'] 33509 19770 GLDQSLVSL True PC9_epitope_Rep3 930.5022115863 930.50110993586 81.273 2 -0.341715254967651 0.0907180075951603 0.8061088822777888 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 134465 10296 VYPQKETI True PC9_epitope_Rep3 976.5229470308799 976.52184993586 44.551 2 -0.3418416369762418 0.09076939381093684 0.8062489493925333 ['ENST00000359634.9_1_2:196545196-196545259:+|nuORF'] 70654 26433 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 108.06 3 -0.34185586862600065 0.09078545313245139 0.8062647237893013 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 64906 14170 LQEDPPVGV True PC9_epitope_Rep5 952.4865615221598 952.48601496793 59.515 1 -0.3419235832514717 0.09085289390487292 0.8063397835245137 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 75538 17074 NKWMRNGPNI True PC9_epitope_Rep3 1228.61351045412 1228.6118549037901 70.828 3 -0.34199311266631094 0.09085289390487292 0.8064168629127886 ['EDNRB|p.C131W|1|0.54|ENSG00000136160|chr13:77918181-77918181|G/C|missense_variant'] 119294 21436 VALRYVWPL True PC9_epitope_Rep5 1115.64915060351 1115.6480499358602 87.517 2 -0.34202394338572395 0.09085932257266979 0.8064510440287544 ['ENST00000460553.1_1_X:153138617-153141318:-|nuORF', 'nc|ENSG00000198910|P32004-3|L1CAM', 'nc|ENSG00000198910|P32004-2|L1CAM', 'ENSG00000198910|ENST00000370060|L1CAM'] 133581 18717 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85398993586 80.977 2 -0.3420423223919913 0.09085932257266979 0.8064714210498327 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 116078 7592 TSQPSTSVP True H1975_Epitope_Rep2 902.4345259493 902.43342993586 34.155 2 -0.3420456642896091 0.09085932257266979 0.8064751263116745 ['nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'ENST00000488149.5_1_3:182948954-183027611:-|nuORF', 'nc|ENSG00000053524|Q86YR7-3|MCF2L2'] 15746 6524 EC[Carbamidomethyl]GKAFTCSSY True H1975_Epitope_Rep3 1251.49000958286 1251.4889099358602 30.061 2 -0.3420547831815403 0.09085932257266979 0.8064852367945835 ['ENSG00000169981|ENST00000396056|ZNF35'] 48896 20099 KEDKLFRKKRR True PC9_epitope_Rep2 1502.9157638124195 1502.91412490379 82.719 3 -0.342079781921306 0.09085932257266979 0.8065129546148216 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B'] 132386 21463 VVAGQALLL True PC9_epitope_Rep4 882.5538532363399 882.5533049679301 90.747 1 -0.3420805062175173 0.09085932257266979 0.8065137577072946 ['SLC7A13|p.F300Lfs*5|1|0.51|ENSG00000164893|chr8:86217749-86217749|A/-|frameshift_variant', 'nc|ENSG00000164893|Q8TCU3-2|SLC7A13', 'ENSG00000164893|ENST00000297524|SLC7A13'] 81837 12760 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 54.088 2 -0.3421165343882534 0.09085932257266979 0.8065537064869889 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 68811 10104 LTLQEYEFEK True PC9_epitope_Rep1 1298.6394333350997 1298.63779490379 43.738 3 -0.3421379078978909 0.09088982676720408 0.8065774068942713 ['ELOVL6|p.Q230Rfs*29|1|0.33|ENSG00000170522|chr4:110051449-110051449|A/-|frameshift_variant', 'ENSG00000170522|ENST00000302274|ELOVL6'] 69433 8089 LTYITSNDTAP True PC9_epitope_Rep3 1194.57683307854 1194.57517490379 36.089 3 -0.34221374776281016 0.09088982676720408 0.8066615094199832 ['ENST00000604542.1_1_3:72933577-72933772:+|nuORF'] 100451 6960 SLAHGAVI True PC9_epitope_Rep2 766.43373810366 766.43264993586 32.169 2 -0.3422369534417834 0.09088982676720408 0.8066872452275811 ['ENSG00000068654|ENST00000263857|POLR1A'] 9305 6564 AVQNLQQHNLI True H1975_Epitope_Rep1 1276.6887835693599 1276.6876899358601 30.306 2 -0.3423146684947146 0.09091872229971924 0.8067734400520004 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 96490 12296 SAAWEQGL True PC9_epitope_Rep5 860.4028318981998 860.40172993586 52.287 2 -0.34231475523903476 0.09091872229971924 0.8067735362668506 ['IFNA4|p.S103G|1|0.15|ENSG00000236637|chr9:21187225-21187225|T/C|missense_variant'] 4222 16362 AICYQVTP True PC9_epitope_Rep6 893.4316894983299 893.43058993586 75.321 2 -0.3423304032789228 0.09091872229971924 0.8067908929227962 ['ENST00000518062.1_1_5:158588183-158590023:-|nuORF'] 67568 12376 LSTSQTTAPN True PC9_epitope_Rep1 1018.49310345458 1018.49200993586 52.463 2 -0.3423899421091173 0.09091872229971924 0.8068569364865962 ['FN1|p.D812N|1|0.22|ENSG00000115414|chr2:215408192-215408192|C/T|missense_variant'] 67378 5167 LSSKYIMFHVP True NCI_RA007_Epitope_Rep1 1320.69002943932 1320.68839490379 24.182 3 -0.3424212617583787 0.09093316853535799 0.8068916801926566 ['ENST00000249923.7_1_11:14479099-14479171:-|nuORF'] 91541 16299 RIHSIVLV True PC9_epitope_Rep3 935.59163572739 935.59052993586 67.831 2 -0.34245481505775033 0.09093316853535799 0.8069289035182667 ['CON__Q3T052'] 65415 5724 LRFCYYAS True PC9_epitope_Rep4 1021.4691376362099 1021.46804993586 28.843 2 -0.3425285703002514 0.09096687619182145 0.8070107324638276 ['ENSG00000179455|ENST00000314520|MKRN3', 'ENST00000568945.2_1_15:23811631-23811987:+|nuORF'] 68910 12188 LTNQQRYVL True PC9_epitope_Rep5 1133.61930702721 1133.61766490379 51.87 3 -0.34253284194830713 0.09098131996186307 0.8070154719828898 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 30499 5010 GAGESPRH True NCI_RA007_Epitope_Rep2 809.3780141326899 809.37690993586 24.111 2 -0.34256220231617956 0.09098131996186307 0.8070480489723906 ['ENST00000576351.5_2_17:3486716-3491620:-|nuORF'] 139315 16888 YLKNSVMEL True PC9_epitope_Rep2 1095.56343194387 1095.5623299358601 70.206 2 -0.34260513275126153 0.09102946628767147 0.807095685224783 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 134330 23776 VYPALTFIL True PC9_epitope_Rep3 1035.60046907559 1035.59936993586 96.737 2 -0.3426053251037345 0.09102946628767147 0.8070958986686483 ['nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 25697 7431 FERLTLKHD True NCI_RA007_Epitope_Rep3 1157.61930702721 1157.61766490379 36.354 3 -0.34261501620664936 0.09102946628767147 0.8071066524752819 ['ENSG00000087086|ENST00000331825|FTL'] 52500 8003 KKYADLVSI True NCI_RA007_Epitope_Rep4 1035.59644632431 1035.5953499358602 37.551 2 -0.3426893369781462 0.09104551392959288 0.8071891281078849 ['ENST00000538014.2_1_Y:21751423-21751552:+|nuORF'] 979 5832 ADYLQKNL True NCI_RA007_Epitope_Rep3 963.50254593947 963.50144993586 29.92 2 -0.3427016429718239 0.09106156100489028 0.8072027852342754 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B', 'ENST00000471988.1_1_2:207621575-207629995:-|nuORF', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 78563 9029 NYQKRFQNL True PC9_epitope_Rep1 1209.6254550368096 1209.62380490379 39.58 3 -0.34273933737556433 0.0910952616340654 0.8072446197912481 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 113673 7574 TLWRRFSRPAK True NCI_RA007_Epitope_Rep5 1416.81023611472 1416.80860490379 35.819 3 -0.3428850908911356 0.09114339682595725 0.8074064034053886 ['THSD1|p.G440S|1|0.22|ENSG00000136114|chr13:52378652-52378652|C/T|missense_variant'] 18257 13462 EIQILKEEHQK True H1975_Epitope_Rep3 1393.75652877601 1393.75542993586 57.056 2 -0.3428986629350913 0.09114339682595725 0.8074214698304916 ['ENSG00000203872|ENST00000388923|C6orf163'] 85581 10188 QGFTNSTV True PC9_epitope_Rep5 852.39774651776 852.3971949679301 44.175 1 -0.3429616008053931 0.09114339682595725 0.8074913414231841 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1'] 118988 6831 VAEKAGTF True PC9_epitope_Rep2 821.42831837005 821.4272299358599 31.68 2 -0.34297010310415654 0.09115944075695523 0.8075007808797902 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'nc|ENSG00000196655|Q9Y296-2|TRAPPC4'] 118748 20514 TYYCQQANSF True PC9_epitope_Rep4 1223.4917235555902 1223.4906299358602 87.057 2 -0.34301438323357325 0.09117548412152024 0.8075499435827247 ['nc|ENSG00000278857|P01611|IGKV1D-12', 'nc|ENSG00000243290|A0A0C4DH73|IGKV1-12'] 54910 7997 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 40.224 3 -0.34310426703630476 0.09119152691968226 0.807649747928992 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 46705 16242 ITDVIIGFQ True NCI_RA007_Epitope_Rep1 1004.5542471591598 1004.5536749679301 67.285 1 -0.3431303326358634 0.0912027394358739 0.8076786927701181 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 68570 15465 LTGTWTSV True PC9_epitope_Rep2 863.43888305375 863.43778993586 64.763 2 -0.34313235859485397 0.0912027394358739 0.807680942563651 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 135458 8562 WIDCCEYP True H1975_Epitope_Rep2 1027.37793967331 1027.37684993586 37.887 2 -0.34314314822024294 0.0912027394358739 0.8076929243696473 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 3251 15126 AGEYIALYQ True H1975_Epitope_Rep3 1026.5022115862998 1026.50110993586 63.582 2 -0.3431587477700721 0.0912027394358739 0.8077102478845761 ['ENST00000304813.13_1_12:100550719-100551143:-|nuORF'] 70364 18406 LVSSTAPSF True PC9_epitope_Rep3 907.46509780159 907.46400993586 76.006 2 -0.3432772718827616 0.09123643102991792 0.8078418828775683 ['OR1B1|p.G176Afs*107|1|0.34|ENSG00000280094|chr9:122629009-122629009|C/-|frameshift_variant'] 56102 7243 LATVTVRP True H1975_Epitope_Rep2 855.5178020807899 855.51670993586 32.794 2 -0.3434002593732943 0.09125247105337475 0.8079784978942149 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 82504 5183 PPRPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 25.324 2 -0.34346410788345094 0.09126528883319508 0.8080494302277461 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 5140 13701 ALLPLPPAA True H1975_Epitope_Rep1 861.53238951577 861.53184496793 57.837 1 -0.34346411099258833 0.09126528883319508 0.8080494336819857 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF'] 125474 20013 VIVTETIQPLF True H1975_Epitope_Rep3 1258.71728973298 1258.71618993586 83.763 2 -0.3434888342139028 0.09126528883319508 0.8080769015499186 ['ENSG00000179941|ENST00000650064|BBS10'] 86587 6319 QLEEAEEEAQR True PC9_epitope_Rep1 1330.60008770426 1330.59844490379 29.118 3 -0.3435507354480811 0.09127971620691482 0.8081456788220717 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 120505 9066 VEFDSVQSA True NCI_RA007_Epitope_Rep3 980.445090633 980.44398993586 42.752 2 -0.34360021919657324 0.09127971620691482 0.8082006634425056 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 34944 8281 GQPHEVSV True PC9_epitope_Rep4 851.4137309350699 851.41262993586 39.313 2 -0.3436529047700343 0.09132943896369765 0.8082592098850231 ['ENSG00000173546|ENST00000308508|CSPG4', 'CSPG4|p.I1475Hfs*33|1|0.27|ENSG00000173546|chr15:75684762-75684763|-/G|frameshift_variant', 'CSPG4|p.A280V|1|0.16|ENSG00000173546|chr15:75690226-75690226|G/A|missense_variant', 'ENST00000567704.5_1_15:78188620-78189748:+|nuORF'] 137926 20566 YFCYYYFLCP True PC9_epitope_Rep2 1380.5559040352798 1380.55480993586 84.542 2 -0.34368321418157555 0.09132943896369765 0.808292892882223 ['ENSG00000204520|ENST00000449934|MICA'] 121112 9416 VERLETMRR True PC9_epitope_Rep4 1188.63972520196 1188.63808490379 43.829 3 -0.3437497750543961 0.09136312297049273 0.8083668671447922 ['nc|ENSG00000181031|Q9UNE2-2|RPH3AL', 'ENSG00000181031|ENST00000331302|RPH3AL'] 85080 9586 QEKFFKPP True H1975_Epitope_Rep1 1019.5440168286298 1019.54290993586 41.797 2 -0.34379239248930726 0.0913791582105356 0.8084142346882137 ['MICAL3|p.T1545K|1|0.31|ENSG00000243156|chr22:17818027-17818027|G/T|missense_variant'] 79566 4789 PDFAAPPPPPP True H1975_Epitope_Rep3 1101.5494961318898 1101.54838993586 23.548 2 -0.3439044805971812 0.0914112269927824 0.8085388289650407 ['ENSG00000158195|ENST00000618852|WASF2'] 15887 13597 EDISMKFDELY True H1975_Epitope_Rep2 1388.6169836383601 1388.6158899358602 57.437 2 -0.34392911629924006 0.0914112269927824 0.8085662158793829 ['nc|ENSG00000080845|Q9Y2H0-1|DLGAP4', 'ENSG00000080845|ENST00000339266|DLGAP4', 'nc|ENSG00000080845|Q9Y2H0-3|DLGAP4'] 124893 8620 VHNYSAVVL True NCI_RA007_Epitope_Rep4 1000.5341804209198 1000.53308993586 39.94 2 -0.3439764511875909 0.09145932592200459 0.8086188394456283 ['ENSG00000185818|ENST00000423729|NAT8L'] 81411 6768 PLEHYILELK True NCI_RA007_Epitope_Rep4 1253.70197402201 1253.70031490379 32.653 3 -0.3440377429822612 0.09145932592200459 0.8086869842097 ['NUP210L|p.Q297K|1|0.18|ENSG00000143552|chr1:154135934-154135934|G/T|missense_variant'] 231 17334 AAFTAFEEA True PC9_epitope_Rep6 955.4287122928698 955.42760993586 79.289 2 -0.3440417937325719 0.09145932592200459 0.8086914880643621 ['ENSG00000007080|ENST00000445755|CCDC124'] 86131 9401 QIASGLAY True H1975_Epitope_Rep2 821.42831837005 821.4277649679301 41.125 1 -0.34410839995396386 0.09149138904573687 0.8087655480956573 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525284.5_1_15:101565016-101602660:+|nuORF'] 69367 7406 LTVTNYRL True H1975_Epitope_Rep3 978.54983048506 978.54872993586 33.465 2 -0.3441480867273127 0.09149138904573687 0.8088096792407188 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 5681 8364 APAGPALAQ True PC9_epitope_Rep4 794.42865272322 794.42754993586 39.631 2 -0.34420752262311044 0.09150741975896812 0.8088757754227396 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 126358 12448 VLITTDLLAR True NCI_RA007_Epitope_Rep3 1113.6757592741699 1113.67466993586 56.184 2 -0.34427361292005315 0.09152183502426114 0.8089492776976206 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000461021.1_1_3:186505247-186505672:+|nuORF', 'ENST00000494445.1_1_3:186505247-186506105:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1'] 100148 16212 SITKGVIYI True PC9_epitope_Rep5 992.5906326678798 992.58952993586 67.352 2 -0.34431727304227117 0.09152183502426114 0.8089978377283288 ['GPR83|p.I181M|1|0.26|ENSG00000123901|chr11:94393589-94393589|G/C|missense_variant', 'nc|ENSG00000123901|Q9NYM4-2|GPR83', 'ENSG00000123901|ENST00000243673|GPR83'] 69462 17885 LVACFVLSAP True PC9_epitope_Rep1 1018.5521389841799 1018.55104993586 73.587 2 -0.34441269592886486 0.09157153695502585 0.8091039793108885 ['ENST00000306376.9_1_3:185765226-185765490:-|nuORF'] 60701 17030 LHPSEAHILF True PC9_epitope_Rep5 1162.6134933707801 1162.6118549037901 70.523 3 -0.3444260419574161 0.09157153695502585 0.8091188255157287 ['ENSG00000066248|ENST00000264051|NGEF', 'nc|ENSG00000066248|Q8N5V2-3|NGEF', 'nc|ENSG00000066248|Q8N5V2-2|NGEF'] 69332 7967 LTVKAREHCL True H1975_Epitope_Rep1 1168.6386625727998 1168.63756993586 35.594 2 -0.3444808797193868 0.09158756483997318 0.8091798300473416 ['ENST00000443199.6_1_17:73623504-73629591:-|nuORF', 'nc|ENSG00000108469|O94762-4|RECQL5', 'ENSG00000108469|ENST00000317905|RECQL5'] 41465 12481 HYKPTPLYF True PC9_epitope_Rep6 1164.59678067748 1164.59568993586 59.429 2 -0.34452040718239413 0.09163564510153314 0.809223805215607 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 133971 18982 VYIPNKVLI True PC9_epitope_Rep5 1057.65356727761 1057.6524699358602 78.04 2 -0.3445710949508625 0.09163564510153314 0.8092801997084237 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'ENST00000504334.5_1_17:48627490-48633020:+|nuORF', 'ENST00000503063.5_1_17:48629318-48633020:+|nuORF', 'ENST00000511937.5_1_17:48628543-48633020:+|nuORF'] 64699 19567 LPVSPSLLPV True PC9_epitope_Rep4 1020.62193279616 1020.62082993586 83.387 2 -0.344606335306539 0.09163564510153314 0.8093194097680281 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 14700 5496 DVKADNLSSD True PC9_epitope_Rep4 1062.4829326937001 1062.48182993586 27.899 2 -0.34462097231638433 0.09165167072439222 0.809335696100833 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 106718 9203 [Acetylation]-STVHEILC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep1 1127.56449516876 1127.5633899358602 39.798 2 -0.344637914701428 0.09166607861124833 0.8093545479588783 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ANXA2|p.S112Lfs*3|1|0.48|ENSG00000182718|chr15:60360964-60360964|A/-|frameshift_variant', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 107070 20615 SVGRRKLAL True PC9_epitope_Rep3 998.6348975216998 998.63380993586 84.564 2 -0.3446487309427465 0.09166607861124833 0.8093665834439134 ['ENSG00000215182|ENST00000621226|MUC5AC', 'MUC5AC|p.Q326Pfs*7|1|0.11|ENSG00000215182|chr11:1164288-1164289|-/C|frameshift_variant'] 33165 15869 GIVFPDCFYP True PC9_epitope_Rep1 1156.52631815916 1156.5252299358601 65.85 2 -0.34476393680561435 0.09168210284907824 0.809494785876149 ['ENSG00000112293|ENST00000230036|GPLD1', 'nc|ENSG00000112293|P80108-2|GPLD1', 'ENST00000378243.8_1_6:24473808-24489784:-|nuORF'] 48381 10318 IYTNLNQKI True PC9_epitope_Rep6 1105.61315901761 1105.61206993586 50.386 2 -0.3447939954661183 0.09169650889974773 0.8095282385525295 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 82302 2610 PPHPPPPPP True NCI_RA007_Epitope_Rep5 931.49158733295 931.49048993586 14.74 2 -0.3447968701580828 0.09169650889974773 0.809531437900645 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 65312 3706 LRDAWRRR True NCI_RA007_Epitope_Rep4 1127.64244251363 1127.64134993586 20.38 2 -0.3448278677575739 0.0917012082194197 0.8095659369733514 ['STOX1|p.Y782Lfs*9|1|0.29|ENSG00000165730|chr10:68886139-68886140|-/T|frameshift_variant', 'STOX1|p.L805Cfs*20|1|0.18|ENSG00000165730|chr10:68886206-68886206|G/-|frameshift_variant', 'ENSG00000165730|ENST00000298596|STOX1', 'STOX1|p.G417Vfs*55|1|0.25|ENSG00000165730|chr10:68885044-68885044|G/-|frameshift_variant', 'nc|ENSG00000165730|Q6ZVD7-3|STOX1', 'nc|ENSG00000165730|Q6ZVD7-2|STOX1'] 87292 13885 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.50777496793 58.429 1 -0.34486598314924316 0.0917012082194197 0.8096083596861853 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 12308 9033 DIPAKGPNI True NCI_RA007_Epitope_Rep5 923.5076313199099 923.50652993586 41.402 2 -0.34488303500505557 0.0917012082194197 0.8096273391784232 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 128935 14515 VQIEHISSL True PC9_epitope_Rep1 1024.5553097883198 1024.5542099358602 60.656 2 -0.3448885321160954 0.0917012082194197 0.809633457799007 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 10904 5200 DAAEARDP True H1975_Epitope_Rep2 843.3722600459099 843.3711699358599 25.073 2 -0.3449521643525523 0.0917012082194197 0.8097042873988927 ['BEST2|p.A345D|1|0.34|ENSG00000039987|chr19:12756226-12756226|C/A|missense_variant'] 44138 19971 IIRRRADNI True PC9_epitope_Rep1 1125.6730739355698 1125.67196993586 81.643 2 -0.34495285311080814 0.0917012082194197 0.8097050540922184 ['ENST00000330137.11_1_17:57189456-57189504:-|nuORF'] 30776 20096 GALSQLPL True PC9_epitope_Rep3 797.4647038787699 797.4641549679301 82.551 1 -0.34496115012243467 0.0917012082194197 0.8097142899868834 ['ENSG00000260220|ENST00000638797|CCDC187'] 83353 21624 PTFPLLLGT True PC9_epitope_Rep4 957.5535188831699 957.55242993586 91.366 2 -0.345002278659647 0.0917012082194197 0.8097600739898947 ['nc|ENSG00000123427|Q96AZ1-3|EEF1AKMT3', 'ENSG00000123427|ENST00000300209|EEF1AKMT3'] 5156 13191 ALLRVWGRIA True H1975_Epitope_Rep3 1153.70839681513 1153.7072899358602 55.991 2 -0.34509971081149776 0.0917172287286581 0.8098685440128222 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 85073 6207 QEITYAELNLQ True NCI_RA007_Epitope_Rep5 1320.6561460283997 1320.65504993586 30.552 2 -0.34523698573356565 0.09178616152530117 0.810021392371712 ['ENST00000537699.1_1_12:10603035-10603776:-|nuORF', 'nc|ENSG00000134545|P26715-2|KLRC1', 'ENSG00000134545|ENST00000359151|KLRC1'] 130840 6558 VTAVSLPR True NCI_RA007_Epitope_Rep3 841.5021520166499 841.50104993586 32.848 2 -0.34526214551296047 0.0917989417989418 0.8100494092097315 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 45396 13778 IQEMENLP True PC9_epitope_Rep6 972.45863252216 972.45752993586 64.798 2 -0.3452691652691151 0.0917989417989418 0.8100572262570319 ['SMARCA2|p.L361M|1|0.3|ENSG00000080503|chr9:2054631-2054631|C/A|missense_variant'] 136067 10978 WRGRWRWWEHK True NCI_RA007_Epitope_Rep1 1681.8490812349298 1681.8474449037901 46.697 3 -0.34527097904126547 0.0917989417989418 0.8100592460448695 ['ENST00000361226.7_1_9:35546604-35546643:+|nuORF'] 1597 6273 AEFAEVSK True PC9_epitope_Rep1 879.43379767331 879.43270993586 28.942 2 -0.3453829875929983 0.09181333991746322 0.8101839855065922 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 65715 6989 LSCHLCLVP True H1975_Epitope_Rep3 983.49324420907 983.49214993586 31.845 2 -0.3453890139252616 0.09181333991746322 0.8101906972664115 ['ENST00000371835.8_1_19:15357923-15358298:-|nuORF'] 88845 5612 QVASTLKQV True PC9_epitope_Rep6 972.5603951687598 972.55928993586 29.659 2 -0.3454948384243771 0.09186462797382855 0.810308565943861 ['ENSG00000166295|ENST00000299381|ANAPC16'] 31097 6662 GAVGAGEFVSP True H1975_Epitope_Rep3 989.4818104948899 989.48070993586 30.577 2 -0.34551660551356284 0.09187740274397771 0.8103328122358905 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000411772.5_2_15:43699583-43738985:-|nuORF'] 135620 18013 WLKRRIWRMP True NCI_RA007_Epitope_Rep5 1440.82886338432 1440.82776993586 76.085 2 -0.3455260079156417 0.09187740274397771 0.8103432857343003 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 66236 20422 LSEWLIDV True PC9_epitope_Rep1 973.5120479940099 973.51094993586 83.367 2 -0.3455465152009065 0.09187740274397771 0.8103661295563017 ['ENSG00000169371|ENST00000308588|SNUPN'] 26026 10305 FGGPLERLDAI True H1975_Epitope_Rep3 1186.63462273818 1186.63352993586 44.691 2 -0.3456596718323113 0.09194307781833572 0.8104921887763625 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 67492 20101 LSSVGLSSV True PC9_epitope_Rep3 847.4650978015901 847.46400993586 82.57 2 -0.34569394856981983 0.09194307781833572 0.810530377171708 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 46561 20475 ITAFDLTDV True PC9_epitope_Rep6 993.5018772331299 993.50132496793 91.475 1 -0.3457456066747261 0.09194307781833572 0.8105879333604114 ['ENSG00000100228|ENST00000263116|RAB36', 'nc|ENSG00000100228|O95755-2|RAB36'] 115680 16930 TSAESFVNV True PC9_epitope_Rep2 952.45017601344 952.44906993586 70.364 2 -0.34576234009718476 0.0919590901075648 0.8106065780643577 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 80229 11578 PGALDGGEP True PC9_epitope_Rep1 811.37119741675 811.37010993586 49.413 2 -0.34578459939873785 0.09197510183209606 0.8106313803671408 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 22867 6826 EVDEDFDSK True PC9_epitope_Rep3 1082.44039917538 1082.4393099358601 31.272 2 -0.34581960967932607 0.09200874594442093 0.8106703916614832 ['ENSG00000142634|ENST00000375980|EFHD2'] 139844 6388 YPNSGSVSA True PC9_epitope_Rep4 880.39266113732 880.3921149679301 31.66 1 -0.34589502947554807 0.09205839827908453 0.810754435828889 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 101835 10791 SLPHAEAL True PC9_epitope_Rep3 836.43921740692 836.43812993586 46.471 2 -0.3459098452528001 0.09205839827908453 0.8107709466629883 ['ENST00000371989.7_1_9:136230106-136230334:-|nuORF'] 68367 8765 LTEQLEQFKRA True NCI_RA007_Epitope_Rep1 1361.73031402817 1361.72866490379 38.095 3 -0.34595145102487 0.09207440712333598 0.8108173139917862 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 12858 17895 DLHGAIISAL True PC9_epitope_Rep1 1008.56039516876 1008.55928993586 73.626 2 -0.3460840734423301 0.09214168591427614 0.8109651288734187 ['ENST00000586136.5_1_19:30097284-30104129:+|nuORF'] 15819 7251 EDEEEEGDP True H1975_Epitope_Rep2 1047.35164374063 1047.35054993586 32.825 2 -0.34608680772310935 0.09214168591427614 0.8109681766094001 ['ENSG00000130037|ENST00000252321|KCNA5', 'KCNA5|p.G183Afs*175|1|0.14|ENSG00000130037|chr12:5044691-5044691|G/-|frameshift_variant'] 94758 20575 RSKRLFRN True NCI_RA007_Epitope_Rep2 1075.6362945040298 1075.6351899358601 85.104 2 -0.3462993331548862 0.09220895996050706 0.8112050940726255 ['ENST00000314289.12_2_4:2515602-2515950:+|nuORF'] 37414 10600 GVTEFFGLDP True H1975_Epitope_Rep2 1080.51277627 1080.51166993586 45.795 2 -0.34632500263558585 0.09220895996050706 0.811233713456429 ['ENSG00000172296|ENST00000399002|SPTLC3'] 4800 9303 ALEATKLA True PC9_epitope_Rep1 815.4752685624699 815.47416993586 40.638 2 -0.3463802040393396 0.09222171291562357 0.8112952612516751 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|193|15.97|0.67|4.57|+|ENST00000380859|AKR1C1,AKR1C1', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF'] 49026 7775 KEFPITEA True NCI_RA007_Epitope_Rep4 933.4807478657299 933.47964993586 36.588 2 -0.3463803349525842 0.09222171291562357 0.811295407220145 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 45016 7235 IPEPGCTK True H1975_Epitope_Rep3 843.41603943419 843.41549496793 32.801 1 -0.34638648203550376 0.09222171291562357 0.8113022612504913 ['ENSG00000163209|ENST00000295367|SPRR3'] 130844 9907 VTAVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 43.079 2 -0.34649121973750446 0.092272975688874 0.811419051364097 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 121518 18525 VFAGVFNTF True NCI_RA007_Epitope_Rep1 1000.50181766348 1000.50072993586 76.197 2 -0.34651690919620326 0.09230660743248008 0.8114476989838554 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant', 'F13A1|p.W316L|1|0.37|ENSG00000124491|chr6:6224712-6224712|C/A|missense_variant'] 114139 21078 TPIAGDYILF True PC9_epitope_Rep6 1108.5804619069997 1108.57936993586 93.9 2 -0.3466059150897158 0.09231772669581159 0.8115469600713926 ['nc|ENSG00000071073|Q9UM21-2|MGAT4A', 'ENSG00000071073|ENST00000393487|MGAT4A'] 19928 14978 ELVFDPLSA True H1975_Epitope_Rep2 989.5069626135698 989.50586993586 62.764 2 -0.3466142233123835 0.09231772669581159 0.8115562260423207 ['ENSG00000158769|ENST00000368026|F11R', 'nc|ENSG00000158769|Q9Y624-2|F11R'] 128025 13930 VPKDPAVCL True PC9_epitope_Rep1 940.5051887917599 940.50408993586 58.417 2 -0.34669452595611244 0.09231772669581159 0.811645789954374 ['ENSG00000144357|ENST00000272793|UBR3', 'nc|ENSG00000144357|Q6ZT12-4|UBR3', 'nc|ENSG00000144357|Q6ZT12-3|UBR3', 'nc|ENSG00000144357|Q6ZT12-2|UBR3'] 87646 8348 QQRKLFPHF True NCI_RA007_Epitope_Rep4 1199.65636124227 1199.65471490379 38.925 3 -0.3467330339539066 0.09231772669581159 0.8116887417569538 ['nc|ENSG00000173947|Q8TCI5-2|CIMAP3', 'ENST00000484512.1_1_1:111889274-111891329:+|nuORF', 'nc|ENSG00000173947|Q8TCI5-3|CIMAP3', 'ENSG00000173947|ENST00000369738|PIFO'] 45717 16090 IRQEFRRQLRR True NCI_RA007_Epitope_Rep1 1556.9124097674796 1556.9113099358601 66.692 2 -0.34674154661801265 0.0923320994182972 0.8116982370132314 ['ENST00000403729.6_1_4:80993792-80994179:-|nuORF'] 19911 9595 ELVAEEDQDP True H1975_Epitope_Rep3 1143.4931630242297 1143.4920699358602 41.92 2 -0.34677143388650233 0.0923320994182972 0.811731574753963 ['ENSG00000239697|ENST00000293825|TNFSF12', 'nc|ENSG00000239697|O43508-2|TNFSF12'] 116621 16093 TVAGKSILTNI True PC9_epitope_Rep3 1115.65502382959 1115.65392993586 67.051 2 -0.34688547111380175 0.09236572596992826 0.811858787082795 ['ENSG00000198691|ENST00000370225|ABCA4'] 102299 14218 SLSPCHHPAAP True H1975_Epitope_Rep2 1115.51821308695 1115.5171099358602 59.839 2 -0.3469519079107875 0.0923817245998731 0.8119329064746712 ['ENST00000374695.7_1_1:22175396-22175465:-|nuORF'] 85043 16589 QEIAVQNPL True PC9_epitope_Rep2 1010.5396597241798 1010.53856993586 69.048 2 -0.3471028139219702 0.09243134628265237 0.812101281648248 ['ENSG00000167770|ENST00000538426|OTUB1', 'ENST00000536443.1_1_11:63753967-63757776:+|nuORF', 'ENST00000301453.7_1_11:63753886-63764121:+|nuORF'] 131248 11881 VTFDWDYP True PC9_epitope_Rep3 1041.4443623570098 1041.4432699358601 50.717 2 -0.347105503101231 0.09243134628265237 0.8121042823662573 ['nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4', 'nc|ENSG00000037280|P35916-3|FLT4'] 87410 5097 QPWRGGAGA True PC9_epitope_Rep5 898.4409487424198 898.43984993586 24.631 2 -0.347191689743274 0.09246496871419758 0.8122004579551881 ['ENSG00000165684|ENST00000684778|SNAPC4'] 64253 13633 LPHGFTNMA True PC9_epitope_Rep1 986.4643866089401 986.46328993586 57.295 2 -0.34726781940231305 0.09248096446700507 0.812285417880066 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 27744 10437 FPSAAATAA True PC9_epitope_Rep1 805.39701824177 805.39592993586 45.033 2 -0.3473005471967524 0.09249695965595643 0.8123219437453866 ['ZFP36L1|p.G270Rfs*21|1|0.43|ENSG00000185650|chr14:68789742-68789743|-/G|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 57641 15929 LEEEKQALI True PC9_epitope_Rep3 1071.58119018299 1071.58008993586 66.417 2 -0.3473867749261531 0.09254331083343614 0.8124181838910648 ['ENSG00000118997|ENST00000312428|DNAH7'] 66602 12901 LSIVNGLFAE True PC9_epitope_Rep1 1061.57571087973 1061.57460993586 54.496 2 -0.3474296607891093 0.09254331083343614 0.8124660525261272 ['SERPINB7|p.H323Qfs*5|1|0.67|ENSG00000166396|chr18:63804461-63804461|C/-|frameshift_variant', 'ENSG00000166396|ENST00000398019|SERPINB7', 'nc|ENSG00000166396|O75635-2|SERPINB7'] 32921 5880 GHYTEGAEL True PC9_epitope_Rep2 975.4297749220299 975.42866993586 28.012 2 -0.3474677366018969 0.09254331083343614 0.8125085539282627 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'TUBB4A|p.G400Afs*16|1|0.23|ENSG00000104833|chr19:6495300-6495300|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB4A|p.T221Pfs*13|1|0.12|ENSG00000104833|chr19:6495839-6495839|G/-|frameshift_variant', 'chr16:89921431-89932571|462|11.24|0.7|4.01|+|ENST00000555810|TUBB3,TUBB3', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'chr16:89922183-89932571|455|10.27|0.58|4.15|+|ENST00000556565|TUBB3,TUBB3', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'TUBB3|p.L284Hfs*66|1|0.06|ENSG00000258947|chr16:89935294-89935310|CCGGGCCCTGACCGTGC/-|frameshift_variant', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 56060 11710 LATATTTLTSL True PC9_epitope_Rep5 1091.6074049308302 1091.60630993586 50.041 2 -0.3474740542059314 0.09254331083343614 0.8125156059861808 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 39510 10419 HLEQEIYVNKK True NCI_RA007_Epitope_Rep1 1399.7459640923096 1399.7448699358602 44.511 2 -0.34752639565194776 0.09255409119740644 0.8125740340578175 ['ENSG00000118193|ENST00000367350|KIF14'] 19574 16332 ELQFRLGP True PC9_epitope_Rep3 958.5236157372199 958.52250993586 67.956 2 -0.34755589147815963 0.09255409119740644 0.8126069611669294 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL', 'AGL|p.W208Rfs*10|1|0.07|ENSG00000162688|chr1:99864546-99864547|-/AGACCAC|frameshift_variant'] 119046 9378 VAGDKNTAIV True H1975_Epitope_Rep3 986.53965972418 986.53856993586 41.072 2 -0.34757413921819563 0.09255409119740644 0.8126273321562254 ['ENSG00000204361|ENST00000389586|NXPE2'] 91575 18419 RIKDEFQLL True PC9_epitope_Rep1 1160.6553581827598 1160.6537249037901 75.639 3 -0.34757659178209743 0.09255409119740644 0.8126300701199777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 120116 8448 VEAALPGV True H1975_Epitope_Rep3 754.4225047136199 754.4219549679301 37.479 1 -0.34763164680065944 0.09255409119740644 0.8126915334751379 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 96485 9297 SAASEFDYLQC True H1975_Epitope_Rep1 1232.50195388612 1232.50084993586 40.669 2 -0.3476380006777238 0.09255409119740644 0.8126986271442946 ['ENST00000274496.9_1_5:143549500-143550153:-|nuORF'] 57175 5497 LDVDNDRTTP True NCI_RA007_Epitope_Rep1 1144.53603089572 1144.5349299358602 25.453 2 -0.34764303647116424 0.09255409119740644 0.8127042492938277 ['ENSG00000164741|ENST00000276297|DLC1', 'nc|ENSG00000164741|Q96QB1-4|DLC1', 'nc|ENSG00000164741|Q96QB1-1|DLC1', 'nc|ENSG00000164741|Q96QB1-6|DLC1'] 142448 17768 YYFEGIKQTF True PC9_epitope_Rep6 1294.6233893481397 1294.6217549037901 80.978 3 -0.34764489621868 0.09255409119740644 0.812706325592861 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 94474 19489 RRRRRPLWRVY True NCI_RA007_Epitope_Rep1 1612.96511404668 1612.96345490379 79.967 3 -0.34765554782693797 0.09255409119740644 0.8127182175597942 ['ENSG00000171873|ENST00000379453|ADRA1D'] 31530 7057 GEDNMEDPP True H1975_Epitope_Rep2 1002.3600406796999 1002.35894993586 32.071 2 -0.3476915317335476 0.09255409119740644 0.812758392613433 ['CON__Q3Y5Z3'] 84990 10063 QEFNRLLEA True NCI_RA007_Epitope_Rep3 1118.5720224816198 1118.57092993586 46.676 2 -0.3477020097827304 0.09255409119740644 0.8127700913288883 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 138199 10976 YGRADIAV True PC9_epitope_Rep1 863.4501164437899 863.44900993586 47.108 2 -0.34774656400389675 0.09255409119740644 0.8128198373011652 ['GRIA3|p.S817Rfs*3|1|0.6|ENSG00000125675|chrX:123482810-123482810|C/-|frameshift_variant', 'nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 14727 8557 DVLYPYFMVQK True NCI_RA007_Epitope_Rep1 1401.70025976985 1401.69862490379 37.288 3 -0.3477545917789376 0.09255409119740644 0.8128288007481378 ['ENSG00000105135|ENST00000263383|ILVBL', 'ENST00000533086.5_1_19:15228578-15234387:-|nuORF'] 67740 12613 LSYFRYMRIYR True H1975_Epitope_Rep1 1566.8129385366599 1566.8118499358602 53.565 2 -0.347765062033836 0.09255409119740644 0.8128404914585324 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 40509 8381 HRDSIVETL True PC9_epitope_Rep6 1068.5563724174801 1068.55526993586 41.901 2 -0.34782452435263445 0.09255409119740644 0.8129068871299633 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54579003-54603452:-|nuORF'] 132837 18725 VVLGLMISSL True PC9_epitope_Rep2 1030.6096538603 1030.60854993586 77.401 2 -0.3479377960733894 0.09258769843367338 0.8130333766227988 ['ENST00000581045.1_2_17:71282696-71305904:-|nuORF'] 138869 4782 YKDLVPDNSK True PC9_epitope_Rep4 1177.5979028762897 1177.5962549037902 24.966 3 -0.3479865083113374 0.0925938975406948 0.813087777212688 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF'] 81666 22139 PLLPMEQLI True PC9_epitope_Rep4 1052.59400379616 1052.59290993586 93.373 2 -0.3480548014898813 0.0925938975406948 0.8131640493956097 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant'] 116942 5022 TVGARGKQ True PC9_epitope_Rep4 815.4613498338299 815.46024993586 25.943 2 -0.3480972327192111 0.0925938975406948 0.8132114404532074 ['ENST00000316881.8_1_17:54965952-54966114:-|nuORF'] 70656 26612 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 109.03 3 -0.3481152281828981 0.0925938975406948 0.8132315399757055 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 33895 11366 GLQDLMSDGWE True H1975_Epitope_Rep1 1249.52850298713 1249.52740993586 48.697 2 -0.34811795067260365 0.0925938975406948 0.8132345808118516 ['ENST00000336798.11_2_1:31345762-31346017:-|nuORF'] 128121 18514 VPLLGGLL True H1975_Epitope_Rep3 780.5109257952 780.51037496793 77.645 1 -0.348128902854256 0.0925938975406948 0.8132468137307665 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant', 'HERC2|p.A1157G|1|0.12|ENSG00000128731|chr15:28245988-28245988|G/C|missense_variant'] 107761 6888 SVSSLCKLYFR True NCI_RA007_Epitope_Rep5 1301.6801930316099 1301.67908993586 33.175 2 -0.34813306132204014 0.0925938975406948 0.8132514585173698 ['nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-10|ARHGAP33'] 90722 5697 REQWRREQER True PC9_epitope_Rep1 1471.7392560024298 1471.73761490379 26.734 3 -0.3481731465247362 0.09265783540022549 0.8132962324430394 ['ENSG00000047644|ENST00000380861|WWC3', 'WWC3|p.T343Pfs*3|1|0.33|ENSG00000047644|chrX:10116470-10116470|A/-|frameshift_variant', 'nc|ENSG00000047644|Q9ULE0-2|WWC3', 'WWC3|p.P695Qfs*17|1|0.05|ENSG00000047644|chrX:10126284-10126296|CGCAGCTGCAGGA/-|frameshift_variant'] 127214 17575 VLVSVGLLGL True PC9_epitope_Rep5 968.6270181765998 968.62592993586 72.611 2 -0.34817806144913327 0.09265783540022549 0.8133017223720455 ['ENST00000225964.9_1_17:48274384-48275320:-|nuORF'] 87505 10892 QQHAILVDL True NCI_RA007_Epitope_Rep3 1035.5712942056298 1035.57018993586 49.918 2 -0.34819857315129354 0.09265783540022549 0.8133246340315217 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 109256 3870 TASYAGPPPP True H1975_Epitope_Rep3 956.4603467743199 956.45924993586 20.002 2 -0.3481991654949833 0.09265783540022549 0.8133252956882318 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1', 'BAHCC1|p.H2173Rfs*44|1|0.12|ENSG00000266074|chr17:81461086-81461090|GCACA/-|frameshift_variant'] 69359 7402 LTVRRHVP True NCI_RA007_Epitope_Rep2 976.59303270972 976.59192993586 33.417 2 -0.34825135852939504 0.09268980095120663 0.8133835974601087 ['ENSG00000164967|ENST00000378959|RPP25L'] 71123 22160 LYLPFSLTF True PC9_epitope_Rep6 1099.59538369515 1099.5942899358602 98.179 2 -0.3482556255147525 0.09268980095120663 0.8133883639788048 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 59632 11542 LFYSSVIE True PC9_epitope_Rep2 956.4854988929999 956.48440993586 49.722 2 -0.3482861953729948 0.09270251704155144 0.8134225131604703 ['ENSG00000170605|ENST00000641329|OR9K2', 'nc|ENSG00000170605|Q8NGE7|OR9K2'] 14697 5653 DVKADNLSSD True PC9_epitope_Rep2 1062.4829326937001 1062.48182993586 27.129 2 -0.3482930407916271 0.09270251704155144 0.8134301602135112 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 56640 14312 LDIIFTWYFNG True H1975_Epitope_Rep1 1387.68123857743 1387.68014993586 60.238 2 -0.34833486399301944 0.09270251704155144 0.8134768821373594 ['ENSG00000113805|ENST00000263665|CNTN3'] 14073 24606 DRRQRPAAEW True PC9_epitope_Rep3 1283.6483157397097 1283.64667490379 100.01 3 -0.3483932747556273 0.09271849790397013 0.8135421373942137 ['ENST00000575120.5_1_16:4526457-4556918:+|nuORF'] 70646 26188 LWHIWRERN True PC9_epitope_Rep1 1308.68397297244 1308.68233490379 106.07 3 -0.3484505160516091 0.09274882434788735 0.8136060893866656 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 142393 10799 YYELWWFWLVW True NCI_RA007_Epitope_Rep1 1689.8020224164497 1689.80038490379 46.001 3 -0.3484562646905171 0.09274882434788735 0.8136125121448714 ['WBP1L-SUFU|4|fusion', 'WBP1L-SUFU|2|fusion', 'WBP1L-SUFU|3|fusion', 'WBP1L-SUFU|1|fusion', 'nc|ENSG00000166272|Q9NX94|WBP1L', 'ENSG00000166272|ENST00000448841|WBP1L'] 132481 15425 VVDGNFEEV True PC9_epitope_Rep2 1006.46074069714 1006.46017496793 64.61 1 -0.34847482353066633 0.09274882434788735 0.8136332475229724 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 142730 13745 YYQGGKFQF True PC9_epitope_Rep6 1136.52909504048 1136.5279899358602 64.664 2 -0.3485790029492364 0.0927824157244003 0.8137496510364027 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 14705 10385 DVKTVLQNW True H1975_Epitope_Rep3 1101.58185888933 1101.5807699358602 45.002 2 -0.34869088174555907 0.09284959492779148 0.813874668907936 ['ENSG00000138379|ENST00000260950|MSTN'] 2974 5427 AFGDTKFS True NCI_RA007_Epitope_Rep1 871.40758292547 871.40648993586 25.181 2 -0.3487107381958895 0.09284959492779148 0.8138968585437939 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000598355.1_1_19:59061017-59061917:+|nuORF'] 66519 8545 LSHLTTHKII True PC9_epitope_Rep5 1161.68699266421 1161.6853349037901 37.813 3 -0.34874334682354086 0.09289915818393153 0.8139332995763133 ['ZNF492|p.G287Afs*15|1|0.17|ENSG00000229676|chr19:22664528-22664528|G/-|frameshift_variant', 'ENSG00000229676|ENST00000456783|ZNF492', 'ENSG00000197360|ENST00000357774|ZNF98'] 31401 7183 GDVVPSVPR True NCI_RA007_Epitope_Rep1 924.5028802926399 924.50178993586 31.929 2 -0.3487601170124881 0.09289915818393153 0.8139520411091423 ['ENST00000600125.5_1_19:58238867-58238939:-|nuORF'] 34435 7479 GPKEPGFEA True PC9_epitope_Rep5 930.4446967101799 930.44358993586 33.72 2 -0.34877377530257075 0.0929118605265475 0.8139673051322912 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 3530 14782 AGLQFPVGR True PC9_epitope_Rep5 943.5239500903898 943.5234049679301 61.858 1 -0.34878978213086226 0.0929118605265475 0.8139851940205834 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'HIST1H2AH|p.R21G|1|0.27|ENSG00000274997|chr6:27147189-27147189|C/G|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 8006 3074 ATDKSFVEK True NCI_RA007_Epitope_Rep5 1023.5236753068699 1023.5225699358599 17.021 2 -0.3488049120991207 0.0929118605265475 0.8140021031684261 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 87284 13484 QPQLPYSQA True PC9_epitope_Rep2 1030.5083595959 1030.5072699358602 57.15 2 -0.3488249584314123 0.0929229252143901 0.8140245071385959 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 130177 7584 VSEGATLLVA True NCI_RA007_Epitope_Rep3 958.5335117145798 958.53240993586 36.963 2 -0.34882773055673477 0.0929229252143901 0.8140276053213871 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000509683.5_1_4:42065060-42077708:+|nuORF'] 38508 3468 HERKHRGEK True NCI_RA007_Epitope_Rep2 1175.6271863723098 1175.62555490379 18.147 3 -0.34887220310464057 0.0929229252143901 0.814077309704486 ['ENSG00000196757|ENST00000254321|ZNF700'] 14587 7793 DTWESLQK True PC9_epitope_Rep4 1005.47672511445 1005.47562993586 37.375 2 -0.3488759608676711 0.0929229252143901 0.8140815096216353 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 69444 18263 LTYQFDSAL True PC9_epitope_Rep1 1056.51277627 1056.51166993586 75.039 2 -0.3489019756150096 0.09293726118575127 0.8141105857296445 ['nc|ENSG00000269404|Q01892-3|SPIB', 'ENSG00000269404|ENST00000595883|SPIB'] 67847 13094 LTANPERCYP True PC9_epitope_Rep2 1162.54409348162 1162.54243490379 55.644 3 -0.34897687570491337 0.09293726118575127 0.8141943033695691 ['ENST00000432959.1_1_2:96931033-96931616:-|nuORF'] 99879 15526 SILRHQNLL True PC9_epitope_Rep1 1092.6403768249602 1092.63926993586 64.543 2 -0.34906848905289395 0.09296429326008873 0.8142967087579389 ['ENSG00000100604|ENST00000216492|CHGA'] 17104 7295 EGLQSILHK True NCI_RA007_Epitope_Rep2 1023.5712942056299 1023.57018993586 32.996 2 -0.34907103225782665 0.09296429326008873 0.8142995516601658 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 18238 7892 EIPDRLQFRQP True NCI_RA007_Epitope_Rep1 1397.7415474182098 1397.7399149037901 34.691 3 -0.34911817086068303 0.09296429326008873 0.8143522462382675 ['ENSG00000108344|ENST00000264639|PSMD3', 'nc|ENSG00000108344|O43242-2|PSMD3', 'ENST00000415039.7_1_17:38140716-38152959:+|nuORF', 'ENST00000485835.1_1_17:38151035-38151804:+|nuORF'] 49841 17699 KIAESIPYL True PC9_epitope_Rep4 1032.5855472874398 1032.5844499358602 76.104 2 -0.34912562005734504 0.09296429326008873 0.8143605736139032 ['nc|ENSG00000198363|Q12797-10|ASPH', 'ENSG00000198363|ENST00000379454|ASPH'] 114986 10813 TQYTWTQLP True H1975_Epitope_Rep1 1136.5502244078798 1136.54912993586 46.556 2 -0.3491314358809556 0.09296429326008873 0.8143670750940654 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|164|3|sense'] 30290 19078 GAAFATGLF True PC9_epitope_Rep6 853.4334037504899 853.4328549679301 86.029 1 -0.34916214228291936 0.09297862600795803 0.8144014021269869 ['ENSG00000165644|ENST00000372538|COMTD1', 'ENST00000491270.1_1_10:76995548-76995725:-|nuORF', 'ENST00000469299.1_2_10:76995129-76995674:-|nuORF'] 22025 7397 ESKHQTLQGL True H1975_Epitope_Rep3 1139.5934862021898 1139.5923899358602 33.432 2 -0.3491688493358987 0.09297862600795803 0.8144089001286896 ['ENSG00000247596|ENST00000305533|TWF2'] 77411 4881 NSIERVHSLH True NCI_RA007_Epitope_Rep4 1190.6156186291 1190.61397490379 25.224 3 -0.3493114427924078 0.09307934719459164 0.8145683187233411 ['ENST00000428210.5_1_2:61721024-61721165:-|nuORF'] 32463 20247 GGALVHLLDL True PC9_epitope_Rep1 1006.5811306133398 1006.58002993586 82.708 2 -0.34933265548064363 0.09307934719459164 0.8145920358974593 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF'] 62943 18755 LLPEHSLVP True PC9_epitope_Rep4 1003.57023157647 1003.56912993586 80.223 2 -0.34935520216517085 0.09307934719459164 0.8146172449950393 ['ENSG00000188011|ENST00000343216|RTP5'] 24620 22768 FAIRGMLKTF True PC9_epitope_Rep3 1182.65833538822 1182.65668490379 92.846 3 -0.3493961909748765 0.0930953135452977 0.8146630750723114 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4', 'ENST00000550968.5_1_12:112641421-112665930:-|nuORF'] 7622 8493 ASGFEDLLK True NCI_RA007_Epitope_Rep1 978.5022115862998 978.50110993586 37.037 2 -0.34942600910285415 0.093111279333838 0.8146964159861592 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'NLRP11|p.N1007Ifs*16|1|0.14|ENSG00000179873|chr19:55785709-55785709|A/-|frameshift_variant', 'ENSG00000179873|ENST00000589093|NLRP11'] 9737 19443 AYGSLFNTI True PC9_epitope_Rep6 984.4916469026 984.49109496793 87.449 1 -0.34946075970227436 0.09312724456024224 0.8147352730670917 ['nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF', 'nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 15285 8575 EAFDFDEYQP True PC9_epitope_Rep3 1259.4982484046698 1259.49714993586 37.935 2 -0.34949393486278046 0.0931350114416476 0.8147723695006805 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3'] 19202 12938 ELIGAAKA True PC9_epitope_Rep3 771.44905381463 771.44794993586 54.79 2 -0.3494992724887045 0.0931350114416476 0.8147783381164193 ['ENSG00000153721|ENST00000607772|CNKSR3', 'nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3'] 31487 4938 GEASPPAPP True NCI_RA007_Epitope_Rep3 821.3919328613299 821.39082993586 26.417 2 -0.34950278239773974 0.0931350114416476 0.8147822629640846 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 31271 16866 GDFQGLVEI True NCI_RA007_Epitope_Rep5 976.4865615221598 976.48601496793 71.628 1 -0.3495552126506559 0.0931350114416476 0.8148408927204877 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.C1821Vfs*7|1|0.06|ENSG00000007174|chr17:11705093-11705094|-/G|frameshift_variant', 'DNAH9|p.V1997Ffs*6|1|0.82|ENSG00000007174|chr17:11742190-11742190|G/-|frameshift_variant', 'DNAH9|p.K2222Sfs*9|1|0.17|ENSG00000007174|chr17:11752883-11752883|C/-|frameshift_variant'] 128800 2555 VQADAPHGV True PC9_epitope_Rep4 892.44028003608 892.43918993586 14.738 2 -0.3495725136508285 0.0931350114416476 0.8148602399492954 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 127002 25524 VLRVLRPLK True H1975_Epitope_Rep2 1092.74953335112 1092.74842993586 104.81 2 -0.34957681025355825 0.0931350114416476 0.8148650447599988 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 27190 18889 FLLPRHHL True PC9_epitope_Rep1 1031.6028691174301 1031.6017699358601 77.442 2 -0.34960345548527477 0.09314605554968845 0.8148948419714038 ['ENST00000328914.4_1_7:4802311-4802611:+|nuORF'] 10718 23510 CRRWRYWEYW True PC9_epitope_Rep1 1602.7302715418598 1602.72916993586 95.218 2 -0.34962322437330046 0.09314605554968845 0.8149169497905067 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 16211 6833 EEEKLAELARQ True H1975_Epitope_Rep1 1314.6779441021397 1314.67630490379 31.327 3 -0.3496367872333981 0.09314605554968845 0.8149321175118809 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000484394.5_1_X:152720945-152722644:-|nuORF'] 130208 5727 VSESGPVSP True H1975_Epitope_Rep3 857.4130622287299 857.41196993586 27.057 2 -0.34964479709353763 0.09314605554968845 0.8149410752318343 ['ENST00000369851.5_1_1:110091277-110091355:+|nuORF'] 133451 13679 VVYGGGAAEI True PC9_epitope_Rep4 934.4759968384599 934.47544496793 60.507 1 -0.3496812075946154 0.09316201707295609 0.8149817951002161 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 127003 25613 VLRVLRPLK True H1975_Epitope_Rep2 1092.74953335112 1092.74842993586 105.15 2 -0.3497859387376092 0.09321317938608843 0.8150989277985486 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 85336 6130 QESPPAAAV True H1975_Epitope_Rep3 868.4290466460399 868.4284949679301 28.591 1 -0.3497919840174477 0.09322749832799465 0.8151056891937762 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 33961 11154 GLSLQAQLL True H1975_Epitope_Rep3 941.5545815123298 941.55348993586 47.999 2 -0.3497999549371673 0.09322749832799465 0.8151146043829641 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 131027 14034 VTDRMTENMAT True PC9_epitope_Rep5 1267.55367218915 1267.5520349037902 58.998 3 -0.3500063293710781 0.09327537354147235 0.8153454446341968 ['TNN|p.V719M|1|0.15|ENSG00000120332|chr1:175116974-175116974|G/A|missense_variant'] 22024 9033 ESKDVNLD True PC9_epitope_Rep3 918.42944056886 918.4288949679301 39.688 1 -0.35001819533573164 0.09327537354147235 0.8153587183476418 ['ENST00000487890.5_1_7:23286476-23290466:+|nuORF', 'ENST00000492512.1_1_7:23290343-23290466:+|nuORF'] 117663 4991 TVTRTHHFK True NCI_RA007_Epitope_Rep5 1125.60432566941 1125.60268490379 25.902 3 -0.35002497172632957 0.09327537354147235 0.815366298722264 ['nc|ENSG00000144852|O75469-7|NR1I2'] 112802 18350 TLIEGTSLTF True PC9_epitope_Rep1 1080.57029114612 1080.56918993586 75.372 2 -0.3501087070911303 0.09332488604966299 0.815459971828572 ['ENSG00000153294|ENST00000283303|ADGRF4'] 32993 6481 [Acetylation]-GIGDEIEDP True H1975_Epitope_Rep2 985.4240211515499 985.42292993586 29.845 2 -0.350129610647191 0.09332488604966299 0.8154833570779694 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.G4836E|1|0.11|ENSG00000198626|chr1:237819109-237819109|G/A|missense_variant', 'ENST00000608590.5_1_1:237955470-237994843:+|nuORF', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 101279 24532 SLIEDLILL True PC9_epitope_Rep2 1027.6165130625498 1027.61540993586 99.982 2 -0.3503431632511552 0.09340794706648366 0.815722282077428 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'SMYD3|p.H408N|1|0.17|ENSG00000185420|chr1:245749628-245749628|G/T|missense_variant', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 97988 5731 SEPQDLASP True H1975_Epitope_Rep2 942.42944056886 942.42834993586 27.042 2 -0.3504711651752633 0.09340794706648366 0.8158655084840015 ['ENST00000374040.7_1_1:27693273-27693339:-|nuORF'] 80680 10729 PGVEELSSC True H1975_Epitope_Rep2 919.39569791243 919.39514496793 46.296 1 -0.3505095394154172 0.09340794706648366 0.8159084492904735 ['ENST00000487875.5_1_15:91490935-91491606:+|nuORF'] 116970 17862 TVGLGTAAGV True PC9_epitope_Rep2 844.4654321547599 844.46432993586 74.008 2 -0.3505252046878869 0.09342390061062524 0.8159259790524198 ['ENST00000582193.5_2_17:37356602-37357495:+|nuORF', 'ENST00000579260.5_2_17:37356602-37356950:+|nuORF'] 83354 5544 PTFSQTDR True PC9_epitope_Rep5 950.4457593393399 950.44466993586 26.331 2 -0.35054903233607193 0.09345416153440085 0.8159526430227441 ['ENSG00000151491|ENST00000281172|EPS8', 'EPS8|p.K307*|1|0.12|ENSG00000151491|chr12:15660633-15660634|-/C|frameshift_variant', 'EPS8|p.Y45Lfs*2|1|0.4|ENSG00000151491|chr12:15681228-15681229|-/A|frameshift_variant'] 94760 19872 RSKRQLRRYPR True NCI_RA007_Epitope_Rep3 1514.9018450837798 1514.9007499358602 86.607 2 -0.3505578073010984 0.09345416153440085 0.8159624626187556 ['ADAM22|p.C433Hfs*48|1|0.25|ENSG00000008277|chr7:88143101-88143102|-/CA|frameshift_variant', 'nc|ENSG00000008277|Q9P0K1-4|ADAM22', 'nc|ENSG00000008277|Q9P0K1-3|ADAM22', 'nc|ENSG00000008277|Q9P0K1-5|ADAM22', 'nc|ENSG00000008277|Q9P0K1-2|ADAM22', 'nc|ENSG00000008277|Q9P0K1|ADAM22', 'ENSG00000008277|ENST00000413139|ADAM22'] 107912 11907 SVVSGAVVAA True PC9_epitope_Rep4 858.4810822188999 858.47998993586 53.58 2 -0.35056379072495764 0.09345416153440085 0.8159691583816786 ['ENSG00000204592|ENST00000376630|HLA-E'] 41686 19018 IAGVTGFIGL True PC9_epitope_Rep1 946.5487678559 946.54766993586 77.943 2 -0.35072911015061015 0.09346846846846847 0.8161541695766117 ['nc|ENSG00000198513|Q8WXF7-2|ATL1', 'ENSG00000198513|ENST00000358385|ATL1'] 25750 6354 FETARHNLI True NCI_RA007_Epitope_Rep2 1099.5774422152301 1099.5763499358602 29.321 2 -0.35074076936069265 0.09346846846846847 0.8161672182875019 ['ENSG00000127990|ENST00000648936|SGCE', 'nc|ENSG00000127990|O43556-3|SGCE', 'nc|ENSG00000127990|O43556-4|SGCE'] 87140 4945 QPATATAATAA True PC9_epitope_Rep3 972.4876241513199 972.48652993586 24.114 2 -0.35090622141677874 0.09350201467457288 0.8163523984933834 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 131778 11314 VTPSTEVLNP True H1975_Epitope_Rep2 1055.54989005471 1055.5487899358602 48.566 2 -0.35097326180509225 0.09357074990322695 0.8164274379824252 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|101|2|anti-sense'] 92595 8217 RMRAWKLAVHP True NCI_RA007_Epitope_Rep2 1363.7659287745898 1363.76428490379 36.599 3 -0.35098897250391486 0.09358505172777817 0.8164450236844133 ['ENST00000549897.1_1_12:58087944-58088778:+|nuORF'] 10708 4999 CRPWAEVRW True H1975_Epitope_Rep2 1201.5814820498497 1201.5798449037902 24.313 3 -0.3509961609262785 0.09358505172777817 0.8164530700689147 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 72616 20624 MLVVSCFR True NCI_RA007_Epitope_Rep1 953.4826795253699 953.48213496793 84.447 1 -0.3510677552554299 0.09360099934901561 0.816533211306653 ['GHSR|p.R70C|1|0.12|ENSG00000121853|chr3:172448206-172448206|G/A|missense_variant'] 4900 24063 ALFGALFLA True PC9_epitope_Rep1 921.5323895157699 921.53128993586 97.368 2 -0.35112949064297505 0.0936169464090925 0.8166023193764013 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 80223 13001 PGAGVFSQLL True PC9_epitope_Rep2 987.5389314481899 987.53782993586 55.295 2 -0.3511737436838893 0.09362136298068466 0.8166518588287814 ['ENST00000303045.10_2_8:139925879-139925975:-|nuORF'] 106796 10156 SVAEKLSKL True PC9_epitope_Rep1 973.5807962601699 973.57968993586 43.941 2 -0.351214813883809 0.09362136298068466 0.8166978363622046 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 57056 11881 LDSEASVHALP True PC9_epitope_Rep2 1137.56660274801 1137.56550993586 51.025 2 -0.3512236977293646 0.09362136298068466 0.8167077818507306 ['ENSG00000148408|ENST00000371372|CACNA1B'] 71235 21385 LYPGIVTFVI True PC9_epitope_Rep6 1120.65323292444 1120.65212993586 95.13 2 -0.35124192172068736 0.09362136298068466 0.8167281838162153 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1'] 135618 19154 WLKRRIWRMP True NCI_RA007_Epitope_Rep1 1440.82886338432 1440.82776993586 78.647 2 -0.35125574842135 0.09362136298068466 0.8167436631072109 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 35657 14016 GTDSSLTAVS True PC9_epitope_Rep6 936.44000525256 936.43890993586 65.767 2 -0.35126421802696417 0.09362136298068466 0.8167531450747488 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 18052 11177 EIFHSKRRRPS True NCI_RA007_Epitope_Rep1 1411.7796642624298 1411.77856993586 47.475 2 -0.35128212994931496 0.09362136298068466 0.8167731981390434 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1'] 8793 10779 AVDPSGLAAA True PC9_epitope_Rep5 870.4446967101799 870.44358993586 46.453 2 -0.3512928560172918 0.09362136298068466 0.8167852064696793 ['DEPTOR|p.P360L|1|0.45|ENSG00000155792|chr8:120009111-120009111|C/T|missense_variant'] 44745 21228 ILYFYVLSL True PC9_epitope_Rep5 1129.64233388757 1129.64122993586 86.703 2 -0.35134770922123815 0.09363566000562905 0.8168466183174615 ['OR2G6|p.G299Pfs*2|1|0.06|ENSG00000188558|chr1:248522540-248522552|AGGGGCCTTGAGG/-|frameshift_variant', 'ENSG00000188558|ENST00000641804|OR2G6'] 88513 16457 QSVSQFLLS True PC9_epitope_Rep4 1007.52876068731 1007.52766993586 71.271 2 -0.3513659659831097 0.09363566000562905 0.8168670584105323 ['nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'POU2F3|p.Q116Sfs*45|1|0.06|ENSG00000137709|chr11:120299709-120299709|C/-|frameshift_variant'] 13544 4454 DPACYEFLWGP True H1975_Epitope_Rep3 1296.5485101557197 1296.54740993586 22.256 2 -0.3514011994723926 0.09366425103778231 0.8169065060734432 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3', 'chrX:152751822-152752394|112|20.12|0.06|8.5|-|ENST00000623806|MAGEA2,MAGEA2', 'ENSG00000183305|ENST00000682532|MAGEA2B', 'chrX:152752513-152753313|115|31.17|0.07|8.89|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751428-152751509|133|65.11|0.18|8.5|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152751725|116|29.16|0.07|8.73|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152752394|126|53.4|0.12|8.82|-|ENST00000623438|MAGEA2,MAGEA2', 'ENSG00000268606|ENST00000684311|MAGEA2', 'chrX:152752513-152753788|112|27.71|0.06|8.91|-|ENST00000620710|MAGEA2,MAGEA2', 'chrX:152733859-152736087|121|44.03|0.12|8.52|+|ENST00000357916|MAGEA12,MAGEA12', 'ENSG00000213401|ENST00000393869|MAGEA12', 'nc|ENSG00000185247|P43364-2|MAGEA11', 'ENST00000518694.1_1_X:148796119-148798433:+|nuORF', 'ENSG00000185247|ENST00000355220|MAGEA11'] 1652 6655 AEFVEVTK True NCI_RA007_Epitope_Rep4 921.4807478657299 921.47964993586 32.22 2 -0.35144313391545 0.09366425103778231 0.8169534571799034 ['CON__P02769'] 17926 11732 EIAKQNWL True PC9_epitope_Rep1 1000.5341804209199 1000.53308993586 50.002 2 -0.3514580300935549 0.09366425103778231 0.816970135666408 ['ENSG00000154451|ENST00000370459|GBP5', 'ENST00000481145.1_1_1:89726389-89728307:-|nuORF'] 32109 12052 GETIFVTA True NCI_RA007_Epitope_Rep5 836.42798401688 836.42688993586 53.016 2 -0.3514603519281666 0.09366425103778231 0.81697273531786 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC|p.K500Rfs*22|1|0.05|ENSG00000141367|chr17:59663971-59663972|-/GGAAAAAG|frameshift_variant', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion', 'CLTC-VMP1|5|fusion'] 139681 10079 YNFDHNYLK True PC9_epitope_Rep2 1212.5563724174797 1212.55471490379 44.1 3 -0.3515255113694641 0.09368019277786573 0.8170456926980594 ['nc|ENSG00000198689|Q92581-3|SLC9A6', 'nc|ENSG00000198689|Q92581-1|SLC9A6', 'ENSG00000198689|ENST00000630721|SLC9A6', 'nc|ENSG00000198689|Q92581|SLC9A6'] 130767 14421 VTAATLQAGV True PC9_epitope_Rep3 929.5181960036098 929.51708993586 60.575 2 -0.3515388013862142 0.09369448597308944 0.8170605735124674 ['ENST00000518143.1_1_8:77528581-77585127:-|nuORF'] 78858 17367 PAEPAFLA True PC9_epitope_Rep6 814.4225047136199 814.4219549679301 79.417 1 -0.35154260255146114 0.09369448597308944 0.8170648296919683 ['ENSG00000163807|ENST00000296121|KIAA1143'] 73675 13454 MYLKTVDKF True PC9_epitope_Rep1 1143.5998174525898 1143.59872993586 56.609 2 -0.35156842801659444 0.09370218603260583 0.8170937467974287 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 58593 9478 LEQQVQFY True H1975_Epitope_Rep1 1053.5131106231697 1053.51200993586 41.375 2 -0.3515734706551082 0.09370218603260583 0.8170993931516737 ['ENSG00000130340|ENST00000392185|SNX9'] 102554 18186 SLVSYQSLGQ True PC9_epitope_Rep6 1080.54513902744 1080.5440499358601 82.593 2 -0.3516071691311776 0.09370218603260583 0.8171371264758687 ['ENST00000426016.5_1_2:39262447-39262622:-|nuORF'] 104619 7265 SQSKVLPVP True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 32.881 2 -0.35167999633524377 0.09370218603260583 0.8172186758746494 ['CON__P02666'] 110823 12366 TGPAWTGTA True PC9_epitope_Rep5 860.4028318981999 860.4022849679301 52.561 1 -0.35177222883683446 0.09370218603260583 0.8173219591272839 ['ENST00000564397.5_1_16:5075481-5078139:-|nuORF'] 73853 18164 NAPKALIV True PC9_epitope_Rep4 824.51198842436 824.51088993586 77.933 2 -0.3517841835659483 0.09370218603260583 0.817335346561557 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 80796 14973 PHLKKTQSL True PC9_epitope_Rep1 1050.61857875122 1050.61748993586 62.414 2 -0.3518229550911185 0.09371647644338146 0.8173787651924065 ['ENST00000283351.8_1_18:29410335-29410500:-|nuORF'] 134555 14701 VYSDYLQTI True NCI_RA007_Epitope_Rep5 1100.53899101784 1100.5378899358602 63.217 2 -0.35186221299937825 0.09371647644338146 0.8174227293733664 ['ENSG00000179715|ENST00000546455|PCED1B'] 13507 16743 DNLTQVINL True PC9_epitope_Rep6 1028.55022440788 1028.5496749679298 76.891 1 -0.3519300147264615 0.09373241418120427 0.8174986612675171 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1'] 62827 27420 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 113.54 3 -0.35199690456678173 0.09380110788710103 0.8175735744201759 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 28043 27153 FQRKRKSRRYY True PC9_epitope_Rep3 1586.8906116937399 1586.8889549037901 111.71 3 -0.3520132360622447 0.09381044487427466 0.817591865219118 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 17840 6239 EHTQTVSQL True PC9_epitope_Rep3 1041.50908787189 1041.50798993586 29.037 2 -0.35203634068024675 0.09381044487427466 0.8176177419642612 ['ENSG00000135968|ENST00000309863|GCC2'] 19788 19051 ELSGTTIIS True PC9_epitope_Rep2 919.48622716899 919.4856749679301 78.644 1 -0.3520443712230802 0.09381044487427466 0.817626736091139 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 42393 9636 IEDFKVGN True H1975_Epitope_Rep3 920.46034677432 920.45924993586 42.081 2 -0.35205175120220544 0.09381044487427466 0.8176350016237537 ['ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-2|PLK4', 'ENST00000503914.1_1_4:128802289-128804548:+|nuORF', 'ENST00000511942.5_1_4:128802289-128804471:+|nuORF'] 28044 27228 FQRKRKSRRYY True PC9_epitope_Rep3 1586.8906116937399 1586.8889549037901 112.05 3 -0.3520710052606221 0.09381044487427466 0.8176565661915717 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 119636 9475 VATVVPTHL True H1975_Epitope_Rep2 935.54401682863 935.54290993586 41.414 2 -0.352138819183352 0.09384396265231841 0.8177325194304811 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 64679 9988 LPVLYQVERTR True H1975_Epitope_Rep3 1372.7826839542 1372.7815899358602 43.455 2 -0.35224949986627224 0.09391264594176396 0.8178564896308115 ['ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484975.5_1_20:44472824-44477348:-|nuORF', 'ENST00000493118.5_1_20:44472824-44485929:-|nuORF'] 85519 11345 QGAGSVLF True NCI_RA007_Epitope_Rep5 777.40210362221 777.40100993586 50.29 2 -0.3522880823169362 0.09396209164117171 0.8178997061787504 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 62260 24187 LLFKTRKRRRK True PC9_epitope_Rep1 1500.9841181557597 1500.98302993586 97.85 2 -0.3523240274378608 0.09396209164117171 0.8179399693030444 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 37795 14104 GYEPPVQESV True PC9_epitope_Rep2 1103.51350454599 1103.51297496793 59.525 1 -0.35236821172173594 0.09397636964624798 0.8179894622211976 ['ENSG00000145425|ENST00000274065|RPS3A'] 56809 17804 LDNIELYWNSY True H1975_Epitope_Rep2 1428.6561460284 1428.65504993586 73.803 2 -0.3523785778235651 0.09397636964624798 0.8180010739242278 ['NDRG2|p.L311Cfs*12|1|0.12|ENSG00000165795|chr14:21018005-21018005|G/-|frameshift_variant', 'nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2', 'ENST00000557416.5_1_14:21486655-21488105:-|nuORF'] 91129 13729 RFVEKYTEL True PC9_epitope_Rep5 1183.62372370131 1183.62208490379 57.833 3 -0.3524373538376291 0.09402415654283655 0.8180669135131929 ['ENSG00000181610|ENST00000313608|MRPS23'] 109594 9238 TEAAQIISA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 40.49 2 -0.35243885339782133 0.09402415654283655 0.8180685933091724 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF'] 52494 9018 KKWTSVIRL True NCI_RA007_Epitope_Rep2 1129.69716342509 1129.69552490379 39.678 3 -0.3525086323197495 0.09402415654283655 0.8181467603176633 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 64462 15468 LPPTHHNCPL True PC9_epitope_Rep1 1127.55459859567 1127.5529549037901 64.318 3 -0.3525525643554103 0.09404008438818566 0.818195974579489 ['ENST00000530117.5_1_1:205027631-205031234:+|nuORF'] 62834 28243 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 117.95 3 -0.3527462050516179 0.09410709890650822 0.8184129084518542 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 58225 6521 LELGVAKK True PC9_epitope_Rep2 856.5382031721999 856.53710993586 30.499 2 -0.35276846231682063 0.09410709890650822 0.8184378441298947 ['ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant', 'SCN10A|p.A856Pfs*16|1|0.41|ENSG00000185313|chr3:38728616-38728616|C/-|frameshift_variant'] 101548 20099 SLLGTVWQV True PC9_epitope_Rep2 1001.55458151233 1001.55348993586 82.719 2 -0.3528154052301849 0.09412302445370321 0.8184904368013131 ['ENST00000305105.2_1_7:100867275-100867446:+|nuORF'] 894 8322 ADLAGELR True NCI_RA007_Epitope_Rep1 843.4450310633499 843.44392993586 36.371 2 -0.35281710273749095 0.09413233019265926 0.8184923386278227 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 62835 28372 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 118.63 3 -0.3528617434483727 0.09413233019265926 0.8185423529247149 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 137281 4535 YCRRWRYWEYW True NCI_RA007_Epitope_Rep2 1765.7936000744096 1765.7925099358602 22.268 2 -0.35287895709750733 0.09413233019265926 0.8185616388765237 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 131221 4967 VTESDLSR True NCI_RA007_Epitope_Rep5 905.44542498617 905.44432993586 25.808 2 -0.35288459000114336 0.09413233019265926 0.8185679499365227 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'ENST00000460094.1_1_9:138758268-138774700:-|nuORF', 'ENST00000312405.10_1_9:138742295-138774724:-|nuORF'] 77567 4416 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 22.093 2 -0.3528947721893201 0.09413233019265926 0.8185793580120225 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 130467 17349 VSPGLTPSL True PC9_epitope_Rep3 869.48583324617 869.48472993586 71.905 2 -0.3529026079403195 0.09414825361669216 0.8185881371798109 ['ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 45094 16979 IPLDPVAG True PC9_epitope_Rep5 780.4381547777599 780.43704993586 70.327 2 -0.35297524997966195 0.09418175426261206 0.8186695264552142 ['CON__P12763'] 13270 13846 DLTDYLMK True H1975_Epitope_Rep1 997.47903361357 997.47792993586 58.404 2 -0.3530368878512668 0.09419602053012725 0.8187385881678382 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 117654 13124 TVTNAVVTV True PC9_epitope_Rep4 902.50729696674 902.5067449679301 58.377 1 -0.3530779585974389 0.09419602053012725 0.8187846064298462 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 113476 14647 TLSVQQTP True PC9_epitope_Rep3 872.4603467743201 872.45924993586 61.474 2 -0.3531121150209754 0.09420862993233149 0.818822877949567 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS'] 105151 13767 SRFPEALRL True PC9_epitope_Rep4 1087.61382772395 1087.6127299358602 60.849 2 -0.3531433100903753 0.09420862993233149 0.8188578317305465 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 85155 5580 QEMSRC[Carbamidomethyl]KT True H1975_Epitope_Rep3 1038.4586498849299 1038.45754993586 26.504 2 -0.35315531922724797 0.09420862993233149 0.8188712879542696 ['nc|ENSG00000139973|Q17RD7-2|SYT16', 'ENSG00000139973|ENST00000683842|SYT16', 'nc|ENSG00000139973|Q17RD7-3|SYT16'] 57829 8435 LEETIENLKHE True H1975_Epitope_Rep3 1353.6776097489699 1353.6765099358602 37.429 2 -0.3531959744300518 0.09422123800485079 0.8189168424660316 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 76462 17394 NQFQGKWYV True PC9_epitope_Rep3 1168.5665431783598 1168.5654499358602 72.075 2 -0.3531962626831297 0.09422123800485079 0.8189171654583538 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2'] 64029 5927 LPAGPKVN True H1975_Epitope_Rep3 794.4650382319401 794.46394993586 27.808 2 -0.3532472466978622 0.09422123800485079 0.8189742943721209 ['ENSG00000125498|ENST00000336077|KIR2DL1', 'nc|ENSG00000125498|P43626-2|KIR2DL1'] 79587 9988 PDILRRVP True H1975_Epitope_Rep1 964.5817993196799 964.58070993586 43.353 2 -0.35327654193771496 0.09423384474789546 0.8190071208820748 ['ENST00000492447.1_1_16:47184135-47184432:-|nuORF'] 27529 10777 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42318993586 46.341 2 -0.35328237084755804 0.09423384474789546 0.8190136524502747 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 67503 18237 LSTCSSHLIL True PC9_epitope_Rep5 1072.5586809166 1072.55758993586 75.163 2 -0.35329266480124505 0.09423384474789546 0.8190251873405272 ['ENSG00000180919|ENST00000316529|OR56B4'] 66245 15989 LSFAHVECL True PC9_epitope_Rep3 1017.49535238405 1017.49424993586 66.646 2 -0.3534237425184553 0.09426236710306651 0.8191720697655956 ['OR2A14|p.A105S|1|0.15|ENSG00000221938|chr7:144129425-144129425|G/T|missense_variant'] 101663 6979 SLLTVNKDQKL True NCI_RA007_Epitope_Rep4 1257.7292513990099 1257.72814993586 33.471 2 -0.35344229951135325 0.09426236710306651 0.8191928647511143 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant', 'USP24|p.V1215*|1|0.31|ENSG00000162402|chr1:55125751-55125751|C/-|frameshift_variant', 'USP24|p.A1582Qfs*15|1|0.1|ENSG00000162402|chr1:55107257-55107257|C/-|frameshift_variant'] 18504 20025 EKGPIVPEI True PC9_epitope_Rep5 980.5542471591599 980.55314993586 82.079 2 -0.3534998836893367 0.09426236710306651 0.8192573943795431 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 58438 18599 LEPGEVVVP True H1975_Epitope_Rep2 937.5120479940099 937.51149496793 77.188 1 -0.3535016451608718 0.09426236710306651 0.8192593683263941 ['ENSG00000204946|ENST00000434415|ZNF783'] 117225 23256 TVLPGILIE True PC9_epitope_Rep5 953.57973363101 953.57918496793 94.44 1 -0.3535931240357872 0.0943134291638843 0.8193618831179246 ['ENSG00000125863|ENST00000347364|MKKS'] 4 5612 AAAAAAAAAAA True PC9_epitope_Rep2 799.41881631551 799.41770993586 26.972 2 -0.3536201891033425 0.09432934436888256 0.8193922138012321 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 84498 20862 QALSPLLSV True PC9_epitope_Rep4 926.5436824754601 926.5431349679301 88.399 1 -0.35368082559878 0.0943419434194342 0.8194601674017994 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 45934 11474 ISEIISSSRRS True NCI_RA007_Epitope_Rep1 1233.6677137716101 1233.6666099358602 48.596 2 -0.3536877449561407 0.0943419434194342 0.8194679218011984 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'ENST00000498803.5_1_18:12449639-12452543:-|nuORF'] 109211 7841 TARCCDLP True H1975_Epitope_Rep2 877.3786083796499 877.37750993586 35.11 2 -0.353711091075552 0.0943419434194342 0.8194940854846139 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 38690 7300 HGAKEDFHPPA True PC9_epitope_Rep5 1204.56252042708 1204.56088490379 33.041 3 -0.3538287294160427 0.09437542830032858 0.8196259236534257 ['ENSG00000135828|ENST00000367559|RNASEL', 'nc|ENSG00000135828|Q05823-2|RNASEL', 'RNASEL|p.A345Qfs*3|1|0.11|ENSG00000135828|chr1:182585774-182585774|C/-|frameshift_variant'] 11175 10785 DDPLAAFK True H1975_Epitope_Rep1 875.4388830537499 875.43833496793 46.446 1 -0.3538776572045852 0.09440891200449818 0.8196807585623528 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 106742 15930 STWTAACQDT True H1975_Epitope_Rep2 1082.4338743262997 1082.43276993586 66.474 2 -0.3539123057615321 0.09442316477492357 0.8197195906899897 ['ENST00000433250.2_1_9:32566378-32566630:-|nuORF'] 80209 14816 PGAAEDDL True H1975_Epitope_Rep3 786.3395629352999 786.3390149679301 62.37 1 -0.35391599499972715 0.09442316477492357 0.8197237253972075 ['nc|ENSG00000075945|Q92845-4|KIFAP3', 'nc|ENSG00000075945|Q92845-2|KIFAP3', 'nc|ENSG00000075945|Q92845-3|KIFAP3', 'ENSG00000075945|ENST00000361580|KIFAP3'] 124426 11285 VGVFTREEVR True PC9_epitope_Rep4 1190.64077074778 1190.6391149037902 51.186 3 -0.3539565788679454 0.09445498629559351 0.8197692099384207 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 130785 12944 VTAGGTVG True H1975_Epitope_Rep1 660.34425439292 660.3437049679301 54.864 1 -0.3540135978590632 0.09445498629559351 0.8198331149499164 ['ENST00000308018.8_1_19:39423336-39423570:+|nuORF'] 5296 12016 ALQHRPRLPR True NCI_RA007_Epitope_Rep3 1242.7421565548998 1242.74050490379 54.391 3 -0.35408564565677286 0.09448846566052321 0.8199138649480963 ['ENST00000323927.2_1_9:140077681-140079444:-|nuORF'] 46372 17011 ISRTPPRRSEP True PC9_epitope_Rep1 1294.7105816430999 1294.7094899358601 70.255 2 -0.35410948736678594 0.09450437471450156 0.8199405866336272 ['ENSG00000140854|ENST00000379661|KATNB1', 'ENST00000566611.5_1_16:57786940-57790081:+|nuORF'] 62845 27045 LLMCEIPMVEL True NCI_RA007_Epitope_Rep4 1289.6433391406897 1289.64169490379 119.9 3 -0.35421518982038436 0.09458889669711876 0.8200590591298126 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 9251 17723 AVPEKLQPLL True PC9_epitope_Rep1 1106.6699456177398 1106.6688499358602 72.969 2 -0.3542468107947076 0.09458889669711876 0.8200945007770923 ['ENSG00000179933|ENST00000319074|C14orf119'] 121366 7964 VEVPAAAP True H1975_Epitope_Rep2 752.4068546494799 752.40630496793 35.581 1 -0.35432818396511345 0.0946014791911881 0.8201857070579461 ['KCNK10|p.A19E|1|0.41|ENSG00000100433|chr14:88263533-88263533|G/T|missense_variant'] 39617 18900 HLLPSQTVL True PC9_epitope_Rep1 1006.5811306133401 1006.58002993586 77.483 2 -0.35433510165472243 0.0946014791911881 0.8201934607452024 ['ENST00000452761.1_1_2:110745136-110745940:-|nuORF', 'ENST00000452245.1_1_2:111141333-111141522:+|nuORF'] 74119 8686 NEAIYDIC[Carbamidomethyl]R True H1975_Epitope_Rep3 1152.52335831647 1152.52226993586 38.409 2 -0.354353811994196 0.0946014791911881 0.8202144322659124 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA3D|p.R215G|1|0.05|ENSG00000075886|chr2:131480336-131480336|C/G|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 12787 8628 DLETM[Oxidation]RRQRNE True H1975_Epitope_Rep1 1462.6946742592197 1462.69356993586 38.114 2 -0.35438021392600705 0.09461738458295271 0.8202440250472423 ['ENSG00000186432|ENST00000334256|KPNA4'] 48315 22777 IYQYYFELAL True PC9_epitope_Rep5 1321.65944050369 1321.65834993586 92.604 2 -0.354429833849978 0.09466842336407554 0.8202996422549446 ['ENST00000589950.1_1_17:43228002-43228083:-|nuORF'] 40248 3595 HQIWHHSFY True NCI_RA007_Epitope_Rep2 1253.57302554113 1253.57192993586 18.634 2 -0.3544691887752291 0.09468432702104486 0.8203437541385235 ['nc|ENSG00000163017|P63267-2|ACTG2'] 87068 22340 QNILSPLML True PC9_epitope_Rep2 1027.5736027047499 1027.5725099358601 91.417 2 -0.3544742977421052 0.09470023011927556 0.8203494806649635 ['ENSG00000185958|ENST00000327337|FAM186A'] 100845 4353 SLEPRIQE True NCI_RA007_Epitope_Rep5 970.5083595959001 970.50726993586 23.355 2 -0.35449903176328024 0.09470615098183861 0.8203772045452639 ['UNK|p.S447I|1|0.16|ENSG00000132478|chr17:75818137-75818137|G/T|missense_variant'] 128254 18380 VPPAVTGITFL True NCI_RA007_Epitope_Rep1 1113.64339651673 1113.6422899358602 75.628 2 -0.35450913608478807 0.09470615098183861 0.8203885303147654 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 80350 7161 PGGLCIKNK True PC9_epitope_Rep3 928.5164221818 928.51532993586 32.558 2 -0.3545323041312116 0.09470615098183861 0.8204144990726462 ['nc|ENSG00000181171|Q8NA97|FER1L6-AS1'] 47136 6173 ITVKETKA True NCI_RA007_Epitope_Rep2 888.5280324113199 888.52692993586 28.62 2 -0.3545779692103786 0.09470615098183861 0.8204656847447623 ['ENSG00000164754|ENST00000297338|RAD21'] 91565 6451 RIIPRHLQL True NCI_RA007_Epitope_Rep3 1144.719295852 1144.7176649037901 32.401 3 -0.3545883110933887 0.09470615098183861 0.8204772769418085 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 108464 14287 SYLTSASSL True PC9_epitope_Rep1 927.45492704071 927.45382993586 59.78 2 -0.3546147674206095 0.09470615098183861 0.8205069318738624 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 112720 16569 TLGSALSL True PC9_epitope_Rep4 760.4330693973201 760.43252496793 71.709 1 -0.3546174027178741 0.09470615098183861 0.8205098857886665 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 30898 5037 GAPVFSRAVER True PC9_epitope_Rep5 1187.6411051009497 1187.63944490379 24.405 3 -0.35464756622700655 0.09472205146219373 0.820543696265774 ['ENST00000502781.5_1_4:147096963-147097065:+|nuORF'] 19665 14244 ELREKLCSI True PC9_epitope_Rep1 1089.58523001761 1089.5841299358601 59.615 2 -0.3548139687990762 0.0947889772906897 0.8207302206363188 ['ENSG00000135968|ENST00000309863|GCC2'] 55228 12445 LADEEKKLRRS True PC9_epitope_Rep1 1343.75211210191 1343.75047490379 52.735 3 -0.3548292906744476 0.0947889772906897 0.8207473954790886 ['ENSG00000211455|ENST00000389032|STK38L'] 85356 7565 QETQQLLQMQQ True H1975_Epitope_Rep2 1373.66091413901 1373.65980993586 34.053 2 -0.3548932422152141 0.09480487547859075 0.8208190814195373 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant'] 3435 7332 AGKAVAITQSP True NCI_RA007_Epitope_Rep4 1041.58185888933 1041.5807699358602 34.841 2 -0.3549351052534459 0.09482077310806301 0.8208660077337524 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 101882 12021 SLPPPIIN True PC9_epitope_Rep1 849.49600400705 849.49490993586 51.101 2 -0.3550347164506114 0.09488769076763667 0.8209776676337034 ['HMCN1|p.T1112N|1|0.58|ENSG00000143341|chr1:185990401-185990401|C/A|missense_variant'] 140042 10187 YQFLREHK True H1975_Epitope_Rep1 1119.5825275956697 1119.5814299358601 44.124 2 -0.35504284929518115 0.09488769076763667 0.8209867842561234 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 25236 14146 FDIAEGVRTVL True NCI_RA007_Epitope_Rep1 1218.66083748602 1218.6597499358602 59.058 2 -0.3550720021019973 0.09493204088083447 0.8210194635497902 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 17813 5874 EHSTEGSVSL True PC9_epitope_Rep6 1044.47236801 1044.4712699358602 30.838 2 -0.35507859721594526 0.09493204088083447 0.8210268564583284 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 107592 17815 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 73.32 2 -0.3550835426627796 0.09493204088083447 0.8210324001466187 ['ENSG00000115919|ENST00000264170|KYNU'] 46320 14100 ISQKLITGL True PC9_epitope_Rep6 971.6015317047498 971.60042993586 66.108 2 -0.3551045661297514 0.09493204088083447 0.8210559668114299 ['ENST00000366513.8_3_1:246829906-246830032:+|nuORF'] 19583 7310 ELQIFDMALSP True H1975_Epitope_Rep1 1262.62167509598 1262.6205699358602 33.125 2 -0.35510692396684357 0.09493204088083447 0.8210586098776714 ['ENST00000493315.1_1_2:63631156-63711794:-|nuORF', 'nc|ENSG00000143951|O95876-3|WDPCP', 'nc|ENSG00000143951|O95876-2|WDPCP', 'ENST00000409835.5_1_2:63587012-63815411:-|nuORF', 'ENSG00000143951|ENST00000272321|WDPCP'] 6599 4854 APVSGGVGA True PC9_epitope_Rep4 713.37080349393 713.37025496793 25.26 1 -0.35512244165908086 0.09494626676968462 0.8210760047696044 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 13059 10961 DLPEYYSW True H1975_Epitope_Rep2 1071.45492704071 1071.45382993586 47.19 2 -0.3551395454080088 0.09494626676968462 0.8210951776136186 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF'] 27291 9497 FLQVTATDA True PC9_epitope_Rep5 964.48656152216 964.48546993586 41.486 2 -0.3552326055124934 0.09495882425242752 0.8211994959724628 ['ENSG00000166341|ENST00000299441|DCHS1'] 82110 15890 PMTQAALGE True PC9_epitope_Rep5 916.4324177743199 916.4318649679301 66.111 1 -0.3552648481739204 0.09495882425242752 0.8212356394706992 ['ENSG00000100625|ENST00000216513|SIX4'] 99694 6349 SIHENFSQA True PC9_epitope_Rep2 1031.4672230599099 1031.4661299358602 29.821 2 -0.35529123965426423 0.09495882425242752 0.82126522395131 ['ENSG00000125633|ENST00000376300|CCDC93'] 72885 8969 MPSRPEASL True PC9_epitope_Rep2 986.4855159763399 986.48440993586 39.855 2 -0.35534183869255986 0.09500816462697312 0.8213219449095799 ['ENST00000549913.6_1_12:113306162-113306792:+|nuORF'] 99629 5713 SIFMMQRFGRK True NCI_RA007_Epitope_Rep1 1399.7216810041098 1399.72003490379 26.28 3 -0.3553489391670148 0.09500816462697312 0.8213299044766169 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 40094 7288 HPVLMSEA True PC9_epitope_Rep4 882.4269384710601 882.42584993586 35.348 2 -0.355443537179146 0.0950750592573084 0.8214359482845861 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 23343 7050 EVRGQSIVV True PC9_epitope_Rep6 985.5556441414899 985.55454993586 36.131 2 -0.35552385079440446 0.0950750592573084 0.8215259797457081 ['ARHGAP30|p.V199G|1|0.17|ENSG00000186517|chr1:161053326-161053326|A/C|missense_variant'] 54114 12764 KVLRKLLKKGP True PC9_epitope_Rep2 1278.8863611770998 1278.8847149037902 54.403 3 -0.35560680884834595 0.09509094739799143 0.8216189758990744 ['GPR75-ASB3|p.R34Pfs*7|1|0.43|ENSG00000115239|chr2:53765477-53765478|-/T|frameshift_variant'] 133482 11741 VWDWWHRRRRR True NCI_RA007_Epitope_Rep2 1707.90832744655 1707.9072299358602 50.267 2 -0.35567361036407685 0.09510516520945259 0.8216938606906002 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 135809 4664 WNGCNEDEHC True PC9_epitope_Rep5 1205.38660686405 1205.38495490379 22.996 3 -0.3557068978898364 0.09510516520945259 0.8217311761885389 ['ITGA11|p.P946Tfs*16|1|0.24|ENSG00000137809|chr15:68313813-68313825|GGAAGCGTAAGGG/-|frameshift_variant', 'ENSG00000137809|ENST00000315757|ITGA11', 'nc|ENSG00000137809|Q9UKX5-2|ITGA11'] 141904 19836 YVEEEMPQI True PC9_epitope_Rep1 1136.5059766373997 1136.5048699358601 81.115 2 -0.35571602458508406 0.09512105198476097 0.8217414072668453 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2'] 107326 22207 SVLETSPDILL True PC9_epitope_Rep1 1185.64926974281 1185.64816993586 90.24 2 -0.3557469137745697 0.09515282386194063 0.8217760342353106 ['ENSG00000119514|ENST00000375011|GALNT12'] 80303 20830 PGFPQIVNS True PC9_epitope_Rep2 957.4919812557699 957.49088993586 85.566 2 -0.35576927014266385 0.09515282386194063 0.8218010958651513 ['ENSG00000128536|ENST00000317716|CDHR3'] 47080 13176 ITSYPGSSYI True NCI_RA007_Epitope_Rep3 1086.5233409537 1086.5222499358601 59.101 2 -0.3558433890954414 0.09518459350806664 0.8218841836925268 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000460777.1_1_1:6609570-6610501:-|nuORF', 'ENST00000464665.1_1_1:6609570-6614245:-|nuORF'] 980 6019 ADYLQKNL True NCI_RA007_Epitope_Rep5 963.50254593947 963.50144993586 29.835 2 -0.3558465459211395 0.09518459350806664 0.8218877225145003 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B', 'ENST00000471988.1_1_2:207621575-207629995:-|nuORF', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 27201 13063 FLLSYKVQP True H1975_Epitope_Rep3 1093.6171817688898 1093.6160899358601 55.488 2 -0.3558890976973529 0.09521468946389074 0.8219354233234972 ['ENST00000521259.1_1_8:87516185-87516770:+|nuORF'] 80948 6174 PIEHGIITN True PC9_epitope_Rep2 992.52909504048 992.52798993586 29.139 2 -0.35590948506544584 0.09521468946389074 0.8219582776850409 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 55524 13929 LAGPAELL True NCI_RA007_Epitope_Rep4 782.4538048418999 782.4532549679301 60.854 1 -0.3559111433306592 0.09521468946389074 0.8219601366100214 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 117800 7253 TVWNNWFYRRF True H1975_Epitope_Rep1 1587.77351625283 1587.7718849037901 32.908 3 -0.35595890609732156 0.0952305720855934 0.822013678930721 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 118110 19596 TYGVSFFLV True NCI_RA007_Epitope_Rep3 1031.5327834385898 1031.5316899358602 85.477 2 -0.35597185731586195 0.09524645414969808 0.8220281973093574 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 65122 15956 LQNAGLVTV True H1975_Epitope_Rep1 913.52328138405 913.5227349679301 66.688 1 -0.3560118261932737 0.0952623356562341 0.8220730025885977 ['IYD|p.Y267Vfs*10|1|0.2|ENSG00000009765|chr6:150398161-150398162|-/G|frameshift_variant', 'ENSG00000009765|ENST00000344419|IYD'] 31266 9634 GDFC[Carbamidomethyl]IQVGR True NCI_RA007_Epitope_Rep2 1050.49166426537 1050.49056993586 42.089 2 -0.35603718625093167 0.09527821660523082 0.8221014312963766 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF'] 84338 22592 PYTPFLTEL True PC9_epitope_Rep5 1079.55391280599 1079.55280993586 91.898 2 -0.356154303069057 0.09534675536676555 0.8222327193263388 ['ENSG00000196305|ENST00000443024|IARS1'] 14590 7295 DTWESLQK True PC9_epitope_Rep6 1005.47672511445 1005.47562993586 37.203 2 -0.356174662220264 0.09538018675840763 0.8222555418857374 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 55498 17927 LAGIRRSGLS True PC9_epitope_Rep5 1028.60907669668 1028.6079699358602 73.973 2 -0.3563838997540168 0.09543116915029927 0.8224900951840601 ['ENST00000264033.5_1_11:119148988-119149257:+|nuORF'] 72097 5938 MFGQTNCWVRP True NCI_RA007_Epitope_Rep5 1337.60089716509 1337.5997899358601 29.526 2 -0.3565723110910466 0.09551725348404536 0.822701299463329 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1'] 137279 4753 YCRRWRYWEYW True NCI_RA007_Epitope_Rep1 1765.7936000744096 1765.7925099358602 22.568 2 -0.35658962156670015 0.09553312856516016 0.8227207038823243 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 130417 11831 VSLSVPQTP True H1975_Epitope_Rep2 926.50729696674 926.5067449679301 50.585 1 -0.35667557014752616 0.09556487705565403 0.8228170486299966 ['ENST00000472277.5_1_1:44440756-44442727:+|nuORF'] 92625 14879 RNDGIALQI True PC9_epitope_Rep1 998.5508931142199 998.5503449679301 62.052 1 -0.3566966839910176 0.09556487705565403 0.8228407162241601 ['ENST00000514109.1_1_4:68567136-68586253:+|nuORF', 'ENST00000498917.2_1_4:68567013-68586253:+|nuORF'] 94853 25246 RSVFRKRKHLL True PC9_epitope_Rep1 1438.89971982546 1438.89862993586 101.99 2 -0.3567159802083934 0.0955949455949456 0.8228623462979274 ['ENST00000581444.5_1_18:20956852-20964997:-|nuORF'] 10040 21226 AYSEAIFEL True PC9_epitope_Rep4 1041.50187723313 1041.5007899358602 89.811 2 -0.3567263953696682 0.0955949455949456 0.8228740211414645 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP'] 126563 16548 VLLRMACSNI True H1975_Epitope_Rep3 1118.5940208795 1118.5929299358602 69.149 2 -0.35672888682882165 0.0955949455949456 0.8228768139329545 ['ENSG00000184166|ENST00000641833|OR1D2'] 15560 8227 EAQCCSPTV True NCI_RA007_Epitope_Rep5 936.3681032656 936.36700993586 38.324 2 -0.35674308826054335 0.09561081764096804 0.8228927329571077 ['ENST00000514938.1_1_22:50943492-50943879:-|nuORF', 'ENST00000474879.6_3_22:50943492-50943863:-|nuORF'] 83266 10796 PTAEGLAAAA True PC9_epitope_Rep1 870.4446967101799 870.44358993586 46.414 2 -0.35678465861624625 0.09564423853146607 0.8229393308830755 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 73696 11671 MYQEHINEI True PC9_epitope_Rep2 1175.52810906431 1175.5270099358602 50.223 2 -0.35690685829708113 0.09565171615076859 0.8230763081017303 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 67655 16498 LSVTESHWP True PC9_epitope_Rep3 1054.5083595959 1054.5072699358602 68.596 2 -0.356947823255852 0.09565171615076859 0.8231222264147553 ['ENST00000311956.8_1_11:46699617-46699725:-|nuORF'] 3035 7646 AFQGPREAD True PC9_epitope_Rep2 989.4566583762098 989.45556993586 34.781 2 -0.35703000705726834 0.09565171615076859 0.823214346783994 ['ENSG00000206530|ENST00000393845|CFAP44'] 126048 13834 VLEEDLDI True PC9_epitope_Rep2 944.4702427516798 944.46914993586 58.496 2 -0.3570517187230861 0.09565171615076859 0.8232386833395146 ['ENSG00000085998|ENST00000371984|POMGNT1', 'nc|ENSG00000085998|Q8WZA1-2|POMGNT1', 'ENST00000485714.1_1_1:46657733-46659087:-|nuORF', 'ENST00000396420.7_1_1:46654944-46659087:-|nuORF'] 61865 17121 LLCMEEYV True PC9_epitope_Rep2 998.44529095714 998.44418993586 71.104 2 -0.3570664790113465 0.09565171615076859 0.8232552280640829 ['ENST00000471337.5_1_1:45805924-45808422:+|nuORF', 'nc|ENSG00000132773|Q96GM8-2|TOE1', 'ENSG00000132773|ENST00000372090|TOE1'] 45159 13549 IPPHGIDSAI True PC9_epitope_Rep3 1018.54474510462 1018.54364993586 57.172 2 -0.3570813020764727 0.09565171615076859 0.8232718431151822 ['ENSG00000156103|ENST00000286614|MMP16'] 12800 17886 DLFGVKGG True PC9_epitope_Rep5 791.4177536863499 791.41664993586 73.815 2 -0.3570975935682407 0.09566422768507309 0.8232901040670983 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 103601 5351 SPSTVIHGA True PC9_epitope_Rep3 867.4450310633498 867.44392993586 25.659 2 -0.3571136143043514 0.09566422768507309 0.8233080614839735 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 121218 7133 VESTVNSVI True PC9_epitope_Rep3 946.4971262058599 946.49602993586 32.445 2 -0.3571682638611515 0.09566422768507309 0.823369317033986 ['ENSG00000197416|ENST00000692030|FABP12'] 140081 16762 YQLDTGHYL True PC9_epitope_Rep5 1108.5189242796 1108.5178299358602 69.48 2 -0.35722496694837624 0.09567841664765848 0.8234328737248927 ['nc|ENSG00000176095|Q92551-2|IP6K1', 'ENSG00000176095|ENST00000321599|IP6K1'] 139451 8980 YLQDVVERSLG True NCI_RA007_Epitope_Rep1 1277.6615657620098 1277.6604699358602 38.931 2 -0.35725948734429575 0.09567841664765848 0.8234715662215056 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF'] 100479 10222 SLAPSSLTL True NCI_RA007_Epitope_Rep4 887.49639792987 887.49530993586 46.174 2 -0.35727987634318187 0.09571015001315905 0.8234944192978572 ['ENST00000534125.1_1_11:117712504-117713491:-|nuORF'] 10105 15974 AYTTVLQEW True NCI_RA007_Epitope_Rep5 1109.5393253710097 1109.53822993586 68.169 2 -0.35732303565069623 0.09571015001315905 0.8235427942571377 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 102521 11307 SLVQDTKL True PC9_epitope_Rep2 902.50729696674 902.50618993586 48.815 2 -0.35737672358468436 0.0957243363685808 0.8236029696218707 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant'] 35462 7175 GSHSMRYFYT True NCI_RA007_Epitope_Rep5 1247.5393424543497 1247.53768490379 34.275 3 -0.3573889884766882 0.0957243363685808 0.8236167164627246 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.Y183Tfs*31|1|0.16|ENSG00000234745|chr6:31356240-31356240|G/-|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 80693 3851 PGVYARVTRLR True NCI_RA007_Epitope_Rep2 1286.7571379126998 1286.7560499358601 19.614 2 -0.357416535580731 0.09573348303568296 0.8236475919174591 ['ENSG00000178297|ENST00000696167|TMPRSS9', 'nc|ENSG00000178297|Q7Z410|TMPRSS9', 'ENST00000395264.3_1_19:2389783-2414036:+|nuORF'] 66920 17994 LSNPLSISLT True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 77.271 2 -0.35754044131625007 0.09573348303568296 0.8237864662176838 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 105991 15408 SSTWLIVFY True H1975_Epitope_Rep3 1114.5698972233 1114.5688099358601 64.678 2 -0.35757735275029123 0.09573348303568296 0.8238278360479224 ['TAS2R60|p.S115I|1|0.15|ENSG00000185899|chr7:143443796-143443796|G/T|missense_variant'] 16247 19942 EEESEFPSTSI True PC9_epitope_Rep4 1253.52994245577 1253.52884993586 84.843 2 -0.35759306435201915 0.09573348303568296 0.8238454452910953 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34'] 68684 14676 LTKEYDRLLEE True H1975_Epitope_Rep1 1407.7245599413898 1407.72346993586 61.666 2 -0.3576053124006705 0.09573348303568296 0.8238591726104741 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 23329 8523 EVQYLLNK True NCI_RA007_Epitope_Rep1 1005.5494961318898 1005.54838993586 37.153 2 -0.3576713100016547 0.09576688946195815 0.8239331404637656 ['ENSG00000149428|ENST00000617285|HYOU1'] 13072 13126 DLPQISLRLQD True H1975_Epitope_Rep3 1296.70376492716 1296.70266993586 55.736 2 -0.3577062474725926 0.09577939164298495 0.8239722967145441 ['ENST00000266069.4_1_20:61576267-61576423:+|nuORF'] 80906 7254 PHYPTPPAP True PC9_epitope_Rep2 975.4814165720699 975.48030993586 33.29 2 -0.357707611751684 0.09577939164298495 0.8239738257267256 ['ENSG00000271503|ENST00000651122|CCL5'] 43577 13924 IGSISSVLY True H1975_Epitope_Rep2 937.5120479940099 937.51149496793 58.706 1 -0.357714409283307 0.09577939164298495 0.8239814440346932 ['ENSG00000040487|ENST00000375153|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-2|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-3|SLC66A1'] 85935 8344 QHHSRLRWHSR True NCI_RA007_Epitope_Rep2 1498.77664457066 1498.77499490379 37.096 3 -0.3577394961434904 0.09581279491992212 0.8240095599283873 ['ENST00000549335.5_1_12:105433559-105443704:-|nuORF'] 68685 15098 LTKEYDRLLEE True H1975_Epitope_Rep1 1407.7245599413898 1407.72346993586 63.329 2 -0.3577670906736749 0.09584619702497894 0.8240404860700572 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 79034 14886 PALICLHPLFI True PC9_epitope_Rep4 1235.71003660791 1235.7089299358602 65.196 2 -0.3577763889857392 0.09586037537274163 0.8240509069607562 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 67588 10835 LSVASIGDI True H1975_Epitope_Rep1 873.48074786573 873.4801949679301 46.638 1 -0.35780812927463496 0.09586037537274163 0.8240864790472983 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 41159 17453 HVFDHPWETV True PC9_epitope_Rep5 1265.58292151849 1265.58182993586 72.132 2 -0.35786966607942705 0.09587623441090316 0.8241554439640649 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 103117 7396 SPHLPGTSSA True PC9_epitope_Rep1 952.46140940348 952.46030993586 33.262 2 -0.35794073752212857 0.0958887290840846 0.824235093067819 ['ENSG00000171456|ENST00000375687|ASXL1', 'ASXL1|p.G643Rfs*15|1|0.29|ENSG00000171456|chr20:32434637-32434638|-/T|frameshift_variant'] 81312 20166 PLAIFALL True H1975_Epitope_Rep1 856.5422259234799 856.54112993586 83.916 2 -0.35806195651318884 0.0958887290840846 0.8243709385617094 ['ENSG00000182327|ENST00000331264|GLTPD2'] 79550 5956 PDDLDGINP True H1975_Epitope_Rep2 954.42944056886 954.42834993586 27.891 2 -0.35807286708988634 0.0958887290840846 0.8243831654072691 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2'] 63280 15202 LLSQPQVSL True PC9_epitope_Rep4 983.56514619603 983.56404993586 66.397 2 -0.3581461717507483 0.09591876107125945 0.8244653126893314 ['ENST00000373307.5_1_10:71164777-71168747:-|nuORF'] 113105 18210 TLNWPIEAF True PC9_epitope_Rep3 1089.5494961318898 1089.54838993586 75.258 2 -0.3581515179021003 0.09591876107125945 0.8244713036717416 ['ENSG00000149150|ENST00000278426|SLC43A1', 'nc|ENSG00000149150|O75387-2|SLC43A1'] 87404 9466 QPVSGTQVV True PC9_epitope_Rep5 913.48689587533 913.4863449679301 41.366 1 -0.35816325108021313 0.09591876107125945 0.8244844520261926 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 94485 25306 RRRRRRRHC True PC9_epitope_Rep3 1350.78643849206 1350.78534993586 102.75 2 -0.35818051492162845 0.09593125219221325 0.8245037980349681 ['ENST00000487413.1_1_3:50453473-50541058:-|nuORF'] 37319 17595 GVSDVDYSL True PC9_epitope_Rep2 953.43419159613 953.43308993586 72.958 2 -0.3582019779988977 0.09593125219221325 0.8245278496098686 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 29058 9698 FTGHLLFLA True NCI_RA007_Epitope_Rep5 1017.5647522732098 1017.56364993586 43.941 2 -0.35820932330290506 0.09593125219221325 0.824536080740663 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant'] 125882 13442 VLARFQVL True PC9_epitope_Rep3 944.58073669052 944.57962993586 56.751 2 -0.35822347070660043 0.09594710720611704 0.8245519342394442 ['ENST00000571735.2_1_19:582536-582838:+|nuORF'] 73827 10345 NALEEHNF True PC9_epitope_Rep5 972.4301092752 972.42900993586 44.777 2 -0.3582722891248422 0.09595959595959595 0.8246066393749247 ['ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000498638.1_1_7:99753991-99754759:-|nuORF'] 39631 6834 HLPAGPSPA True PC9_epitope_Rep5 845.43955176009 845.43844993586 31.258 2 -0.35833796867137774 0.09595959595959595 0.8246802375773226 ['ENST00000394430.5_1_11:64511793-64512018:-|nuORF'] 26679 19107 FISYHLYSF True PC9_epitope_Rep5 1175.56514619603 1175.56351490379 78.527 3 -0.3583584382159084 0.09595959595959595 0.8247031747377703 ['ENST00000376344.7_1_9:86554288-86554393:-|nuORF'] 27373 19329 FLTWEVLS True H1975_Epitope_Rep2 993.5171333744499 993.51602993586 80.222 2 -0.35838775350829344 0.09599130221302564 0.8247360237593947 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|403|3|anti-sense'] 77455 19277 NSVEELFSLL True PC9_epitope_Rep4 1149.59175486669 1149.59064993586 82.254 2 -0.35841124651906964 0.09599130221302564 0.8247623484575805 ['ENSG00000124177|ENST00000373233|CHD6'] 67245 18810 LSRPAVQLL True PC9_epitope_Rep1 995.6127650947899 995.61166993586 77.14 2 -0.35844950390463237 0.09603548947063878 0.8248052167219012 ['nc|ENSG00000104951|Q96RQ9-2|IL4I1', 'ENSG00000104951|ENST00000391826|IL4I1'] 33044 19411 GILCYYWL True PC9_epitope_Rep3 1029.49937513533 1029.4982699358602 79.89 2 -0.3585486531017419 0.09603548947063878 0.8249163132614494 ['nc|ENSG00000103534|Q6UXY8-4|TMC5', 'ENST00000567478.5_1_16:19467998-19503571:+|nuORF', 'nc|ENSG00000103534|Q6UXY8-3|TMC5', 'nc|ENSG00000103534|Q6UXY8-2|TMC5', 'ENSG00000103534|ENST00000542583|TMC5'] 110457 16625 TFDYSEFSLEK True H1975_Epitope_Rep2 1364.61361251008 1364.61250993586 69.18 2 -0.3586085601158975 0.09603548947063878 0.824983437298473 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 76316 14776 NPRRWWRWCWQ True PC9_epitope_Rep1 1672.7946031339197 1672.7935099358601 61.656 2 -0.358631549235478 0.09603548947063878 0.8250091955833245 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 122473 8901 VGEGAYGVVL True PC9_epitope_Rep5 962.5072969667399 962.50618993586 39.182 2 -0.3586678148570728 0.09603548947063878 0.8250498292061436 ['CDKL5|p.S744Vfs*40|1|0.06|ENSG00000008086|chrX:18613229-18613229|A/-|frameshift_variant', 'ENSG00000008086|ENST00000623535|CDKL5', 'nc|ENSG00000008086|O76039-1|CDKL5'] 59991 2696 LGIHEDSTNR True PC9_epitope_Rep3 1140.5523496662001 1140.5506949037901 14.831 3 -0.3586960116969128 0.09604628736740597 0.8250814218718211 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 81642 24487 PLLLLCVAL True PC9_epitope_Rep5 953.5983609006099 953.59726993586 99.268 2 -0.3587296620814208 0.09604628736740597 0.8251191244829875 ['ENSG00000187944|ENST00000342506|C2orf66', 'nc|nan|Q6UXQ4|C2orf66'] 130418 7818 VSLSYKDN True PC9_epitope_Rep1 924.4552613938799 924.45416993586 34.896 2 -0.358738107133154 0.09604628736740597 0.825128586433558 ['SERPINI2|p.H41Y|1|0.05|ENSG00000114204|chr3:167471714-167471714|G/A|missense_variant'] 4688 11895 ALASHLIEA True PC9_epitope_Rep2 923.5076313199099 923.50652993586 51.079 2 -0.3587425679381985 0.09604628736740597 0.8251335843693086 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 106482 7817 STLCQWIY True H1975_Epitope_Rep2 1012.46880328304 1012.46770993586 35.015 2 -0.3587516918548769 0.09605876783898454 0.8251438068841637 ['ZNF607|p.S656Rfs*68|1|0.53|ENSG00000198182|chr19:37698163-37698163|A/-|frameshift_variant', 'ZNF607|p.K540Sfs*184|1|0.26|ENSG00000198182|chr19:37698514-37698514|C/-|frameshift_variant'] 7142 6508 AQYDRQIRL True NCI_RA007_Epitope_Rep3 1161.6254550368099 1161.62380490379 32.638 3 -0.35875865249062083 0.09605876783898454 0.8251516056194231 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 63097 21762 LLQRAGLLL True PC9_epitope_Rep1 995.6491506035098 995.64804993586 88.541 2 -0.3589179445836346 0.09605876783898454 0.825330072332174 ['ENSG00000162300|ENST00000294258|ZFPL1'] 30284 15384 GAACVANWAL True PC9_epitope_Rep2 974.4643866089399 974.46328993586 64.456 2 -0.35898954736734695 0.09610967934220446 0.8254102910179829 ['ENST00000333337.3_1_21:34401273-34401336:+|nuORF'] 117872 4714 TVYVMQYRH True NCI_RA007_Epitope_Rep2 1195.58081334351 1195.5797099358601 22.963 2 -0.35899779906720086 0.0961221556046422 0.825419535507508 ['ENST00000512760.5_1_4:79841695-79860421:-|nuORF', 'ENSG00000163291|ENST00000512733|PAQR3', 'ENST00000342820.10_1_4:79841695-79843397:-|nuORF'] 125105 11051 VIERSDIVV True PC9_epitope_Rep1 1028.5866099165999 1028.58550993586 47.396 2 -0.3590139784925227 0.0961221556046422 0.8254376614549307 ['ENSG00000041802|ENST00000265245|LSG1'] 73558 16229 MVSEELIRV True PC9_epitope_Rep4 1074.57433098074 1074.5732299358601 70.366 2 -0.3590497228869793 0.0961221556046422 0.8254777058314855 ['ENSG00000198793|ENST00000361445|MTOR'] 49922 10131 KIKVSPFVL True NCI_RA007_Epitope_Rep4 1029.6586526580497 1029.65754993586 45.825 2 -0.3591516592694083 0.0961380011570219 0.825591902120127 ['ENST00000468410.5_1_7:106841924-106842017:+|nuORF'] 40852 10974 HSEAAYKLGPL True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 47.2 2 -0.35926694026779865 0.09614878959454484 0.8257210428078046 ['nc|ENSG00000152910|Q9C0A0-2|CNTNAP4', 'ENSG00000152910|ENST00000611870|CNTNAP4'] 81951 14996 PLSYTTILTN True H1975_Epitope_Rep1 1121.5968402471299 1121.59574993586 62.927 2 -0.35930696357801156 0.09614878959454484 0.8257658766212601 ['OR52B4|p.R133S|1|0.18|ENSG00000221996|chr11:4367897-4367897|C/A|missense_variant'] 53607 12845 KRRSYYSYSYY True H1975_Epitope_Rep1 1534.72047762046 1534.7193899358601 54.477 2 -0.3593253105337001 0.09614878959454484 0.8257864285154736 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF'] 59532 16868 LFSGFQEA True H1975_Epitope_Rep2 897.4232329896099 897.42212993586 70.129 2 -0.3593439747905961 0.09614878959454484 0.8258073356958499 ['ENSG00000129474|ENST00000262713|AJUBA', 'ENST00000553911.1_2_14:23444960-23445931:-|nuORF'] 78641 20874 NYTHLTTTVM True PC9_epitope_Rep3 1179.55940919259 1179.55830993586 85.564 2 -0.35949458171306536 0.09623474968447623 0.8259760358232298 ['SULT1B1|p.P245T|1|0.24|ENSG00000173597|chr4:69730546-69730546|G/T|missense_variant'] 22627 5667 ETMKDQQK True NCI_RA007_Epitope_Rep4 1006.4753452154599 1006.47424993586 28.404 2 -0.3595752065696378 0.09628564917877613 0.8260663424376703 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 133844 17070 VYGIRLEHF True PC9_epitope_Rep5 1132.60292868708 1132.60129490379 70.679 3 -0.3596437470159449 0.09631733010814884 0.8261431111827582 ['ENSG00000143228|ENST00000271452|NUF2', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF', 'ENST00000490881.5_1_1:163291794-163297702:+|nuORF'] 79139 6828 PALQRLDFSVR True NCI_RA007_Epitope_Rep5 1300.72516907808 1300.7235149037901 32.949 3 -0.3596522521401321 0.09631733010814884 0.8261526371993929 ['nc|ENSG00000141699|Q86VR2-2|RETREG3', 'ENSG00000141699|ENST00000309428|RETREG3'] 100673 19903 SLDLLCQIKRN True PC9_epitope_Rep6 1301.7125557890497 1301.7114499358602 89.212 2 -0.35966303753272066 0.09633148125427235 0.8261647171431434 ['ENST00000392066.7_1_2:223797982-223799297:+|nuORF'] 46004 9231 ISFTCRFL True PC9_epitope_Rep6 985.50552314493 985.50442993586 45.652 2 -0.35967118848247426 0.09633148125427235 0.826173846401045 ['ENSG00000189077|ENST00000493111|TMEM120A', 'nc|ENSG00000189077|Q9BXJ8-2|TMEM120A'] 34379 9289 GPGAWRRP True H1975_Epitope_Rep2 895.4776686043099 895.47656993586 40.688 2 -0.35974977959462384 0.09634732008272864 0.8262618687357682 ['ENST00000177694.1_1_17:45810693-45811185:+|nuORF'] 40254 3796 HQKLHTQEK True H1975_Epitope_Rep2 1147.60980497267 1147.60816490379 19.617 3 -0.359815070181651 0.09637561779242175 0.8263349922292521 ['ENSG00000186448|ENST00000344387|ZNF197'] 100529 13116 SLAVAISQTL True PC9_epitope_Rep1 1001.5757108797301 1001.5746099358599 55.318 2 -0.3598167117576725 0.09637561779242175 0.8263368307189833 ['ENSG00000181240|ENST00000321510|SLC25A41'] 103596 7766 SPSSTTLTSA True PC9_epitope_Rep1 950.4556553167 950.45454993586 34.693 2 -0.35983750121663155 0.09637561779242175 0.8263601138468262 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 1011 8185 AEADENDMFNY True H1975_Epitope_Rep2 1317.48194671753 1317.48084993586 36.434 2 -0.3598823362161036 0.09637561779242175 0.8264103260425161 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 139452 8839 YLQDVVERSLG True NCI_RA007_Epitope_Rep2 1277.6615657620098 1277.6604699358602 39.03 2 -0.3599391579077929 0.09638807591875362 0.8264739611364603 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF'] 113128 20191 TLPDLVPQL True PC9_epitope_Rep6 994.5698972232999 994.56880993586 90.337 2 -0.3599526146769399 0.09638807591875362 0.8264890312562883 ['ENSG00000163811|ENST00000407426|WDR43'] 136959 11118 YAGSGNVL True PC9_epitope_Rep5 779.38136817763 779.3808149679301 47.755 1 -0.3599757866463105 0.09638807591875362 0.8265149811375109 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 116831 9059 TVEKRRNTENI True H1975_Epitope_Rep3 1358.7266256300597 1358.72552993586 39.831 2 -0.3599902421512357 0.09640391153482178 0.826531169469903 ['ENSG00000134516|ENST00000520908|DOCK2', 'DOCK2|p.D929Ifs*4|1|0.19|ENSG00000134516|chr5:169840836-169840836|G/-|frameshift_variant', 'ENST00000522138.1_1_5:169064330-169108764:+|nuORF', 'DOCK2|p.Q432Kfs*42|1|0.75|ENSG00000134516|chr5:169702338-169702338|C/-|frameshift_variant', 'DOCK2|p.G467Efs*7|1|0.17|ENSG00000134516|chr5:169708183-169708183|G/-|frameshift_variant', 'DOCK2|p.E455Rfs*20|1|0.12|ENSG00000134516|chr5:169702392-169702393|-/TG|frameshift_variant'] 19150 9389 ELHEEVTLP True NCI_RA007_Epitope_Rep4 1065.5342399905699 1065.5331499358601 42.968 2 -0.36001518387999515 0.0964180569185476 0.8265591008010649 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1', 'ENST00000466164.5_1_16:67859786-67861893:+|nuORF', 'ENST00000568990.5_1_16:67859786-67861893:+|nuORF'] 62993 19076 LLPPEESSP True PC9_epitope_Rep2 967.48622716899 967.48512993586 78.741 2 -0.36005863767020674 0.0964180569185476 0.8266077623774802 ['ENST00000408959.2_1_3:48956197-48956359:-|nuORF'] 109210 7749 TARCCDLP True H1975_Epitope_Rep2 877.3786083796499 877.37750993586 34.76 2 -0.36014905174872053 0.09643389117672829 0.8267090092410218 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 94487 10919 RRRRRRRPLWR True NCI_RA007_Epitope_Rep2 1663.0355936483397 1663.0339349037902 47.079 3 -0.36025588875041575 0.09646724844916413 0.8268286413536833 ['ENSG00000171873|ENST00000379453|ADRA1D'] 15514 12297 EANGAYVL True PC9_epitope_Rep5 835.4075829254699 835.40648993586 52.291 2 -0.3603323921142588 0.09649891357678558 0.8269143033589507 ['ENST00000466199.1_1_7:2406190-2411546:+|nuORF'] 102231 8576 SLSFHQSP True PC9_epitope_Rep1 901.42938099921 901.42828993586 37.824 2 -0.36035148364388625 0.09649891357678558 0.8269356799638496 ['nc|ENSG00000117640|Q9H019-2|MTFR1L'] 10573 9904 CMSLHGGIDQY True H1975_Epitope_Rep1 1222.51107910118 1222.5099899358602 43.031 2 -0.36039045198801223 0.09651474530831099 0.8269793118529162 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 9181 15356 AVLQQHHVKL True PC9_epitope_Rep2 1171.68257599011 1171.68094490379 64.349 3 -0.3604081115704233 0.09654302384665253 0.8269990845846679 ['ENSG00000186648|ENST00000342740|CARMIL3'] 14694 4920 DVKADNLSSD True NCI_RA007_Epitope_Rep4 1062.4829326937001 1062.48182993586 25.386 2 -0.36041625140959793 0.09654302384665253 0.8270081983828483 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 45387 4654 IQEEKENTEQR True NCI_RA007_Epitope_Rep5 1402.6688359704199 1402.66720490379 24.585 3 -0.3604220490114582 0.09654302384665253 0.8270146896656453 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1', 'ENST00000526262.5_1_11:70189825-70228249:+|nuORF', 'ENST00000532504.5_1_11:70185286-70228249:+|nuORF'] 120841 6600 VELQQEEQAR True NCI_RA007_Epitope_Rep1 1228.6047791618798 1228.60368993586 29.686 2 -0.36046119084898465 0.09654302384665253 0.8270585143394288 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant'] 136124 16792 WRPSCWRSWRR True PC9_epitope_Rep5 1574.7789530697798 1574.77784993586 69.598 2 -0.3605112752338679 0.0965712984214307 0.8271145894994519 ['ENST00000427153.1_1_7:73149705-73150146:+|nuORF'] 141531 12574 YTLRSLSSL True PC9_epitope_Rep6 1038.57095985246 1038.5698699358602 59.808 2 -0.36054180355577903 0.0965712984214307 0.8271487687584962 ['ENSG00000151229|ENST00000280871|SLC2A13'] 67367 7221 LSSIPGAR True NCI_RA007_Epitope_Rep4 799.45520182423 799.45410993586 34.409 2 -0.36055242297436385 0.0965712984214307 0.8271606580535811 ['ENST00000371370.7_1_1:54411767-54412118:+|nuORF'] 112576 21207 TLELNVLV True PC9_epitope_Rep2 899.53278343859 899.53168993586 87.03 2 -0.3605691563843381 0.0965712984214307 0.827179392329838 ['ENSG00000149564|ENST00000278927|ESAM', 'ENST00000485116.5_1_11:124623544-124626668:-|nuORF'] 34034 9859 GLVKSNSVP True PC9_epitope_Rep1 899.5076313199099 899.50652993586 42.782 2 -0.3606270908404991 0.09660464627352044 0.8272442530031985 ['ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 86518 15742 QLANEEIAQV True PC9_epitope_Rep5 1113.56660274801 1113.56550993586 65.551 2 -0.36063278647804003 0.0966187806587246 0.8272506294693104 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF'] 68449 11149 LTEYQIAV True PC9_epitope_Rep3 935.4963979298698 935.49530993586 47.884 2 -0.3606401851429364 0.0966187806587246 0.8272589125074894 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'COL14A1|p.R971Sfs*29|1|0.42|ENSG00000187955|chr8:120262910-120262910|G/-|frameshift_variant', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 13845 8325 DQNFGKQDAT True H1975_Epitope_Rep2 1122.4941660837399 1122.4930699358601 36.972 2 -0.3607566909402747 0.09666964489059407 0.8273893403872797 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1', 'ENST00000411772.5_2_15:43699583-43738985:-|nuORF'] 81836 12575 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 53.369 2 -0.3607913607733303 0.09668208254502138 0.8274281516829648 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 10185 13665 AYWTPEDTVP True PC9_epitope_Rep3 1177.5291546101298 1177.52804993586 57.626 2 -0.36085905347673286 0.09668208254502138 0.8275039286003482 ['ENST00000600775.5_1_19:58740851-58758098:+|nuORF'] 86739 21023 QLLDTSYLL True PC9_epitope_Rep2 1064.57537652656 1064.5748749679299 86.318 1 -0.36086569369096844 0.09668208254502138 0.8275113616819334 ['ENST00000316846.2_11:65545618-65547282:-|nuORF', 'AP5B1|p.V579Sfs*10|1|0.12|ENSG00000254470|chr11:65778758-65778758|C/-|frameshift_variant', 'ENSG00000254470|ENST00000532090|AP5B1'] 2957 10163 AFESKHSCTL True NCI_RA007_Epitope_Rep4 1121.5175443806102 1121.51644993586 45.949 2 -0.3608789269216697 0.09669790663046335 0.8275261749359785 ['ENST00000564731.5_1_16:46761123-46772038:-|nuORF', 'ENSG00000140795|ENST00000394809|MYLK3', 'nc|ENSG00000140795|Q32MK0-4|MYLK3'] 34355 13639 GPEITEMDDP True H1975_Epitope_Rep2 1102.4488556841 1102.4477499358602 57.602 2 -0.3609080699438284 0.0967137301615107 0.827558797224525 ['nc|ENSG00000111834|Q5TD94-2|RSPH4A', 'ENSG00000111834|ENST00000229554|RSPH4A'] 98857 8065 SGTSDPYVKI True NCI_RA007_Epitope_Rep4 1065.5342399905699 1065.5331499358601 37.8 2 -0.3609289608706042 0.09672955313819258 0.8275821819307527 ['ENSG00000170743|ENST00000318881|SYT9'] 27008 9519 FLEQPEGSRRK True NCI_RA007_Epitope_Rep5 1345.7102472899298 1345.70914993586 43.25 2 -0.3611304200894503 0.0968329596412556 0.8278076764580283 ['nc|ENSG00000157617|Q9Y426-2|C2CD2', 'nc|ENSG00000157617|Q9Y426-3|C2CD2', 'ENSG00000157617|ENST00000380486|C2CD2'] 132144 4980 VTVISRET True PC9_epitope_Rep4 903.5025459394701 903.50144993586 25.765 2 -0.36113764058177206 0.09684369088488755 0.8278157579506544 ['nc|ENSG00000221994|Q2M218-2|ZNF630', 'ENSG00000221994|ENST00000276054|ZNF630'] 112808 15571 TLIGPLDEAL True PC9_epitope_Rep1 1040.57537652656 1040.57426993586 64.717 2 -0.3612347223484843 0.09684369088488755 0.8279244130725444 ['ENST00000511651.5_1_4:99495646-99495724:-|nuORF'] 56071 5462 LATFWYYAK True NCI_RA007_Epitope_Rep1 1161.5858816406098 1161.58478993586 25.317 2 -0.3612403144492302 0.09684369088488755 0.8279306716466921 ['ENST00000534385.1_1_11:118272380-118277824:+|nuORF', 'ENSG00000167283|ENST00000300688|ATP5MG', 'ENST00000527186.1_1_11:118277587-118279810:+|nuORF'] 109556 6639 TDTAPTTTAP True H1975_Epitope_Rep2 974.4556553167 974.45454993586 30.446 2 -0.3612422314670373 0.09684369088488755 0.8279328171326223 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant'] 53198 4625 KQEEYSRSLLK True NCI_RA007_Epitope_Rep2 1379.74087871187 1379.73922490379 22.615 3 -0.36137456526010314 0.09687363166652072 0.8280809168524997 ['ENSG00000149201|ENST00000445632|CCDC81', 'nc|ENSG00000149201|Q6ZN84-3|CCDC81', 'nc|ENSG00000149201|Q6ZN84-2|CCDC81'] 109029 7716 TAIFPSKP True H1975_Epitope_Rep3 859.4803539429099 859.47924993586 34.663 2 -0.36143865171936923 0.09687363166652072 0.8281526344996114 ['nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 79176 13449 PAPAFCLV True PC9_epitope_Rep5 816.4203965386399 816.41928993586 56.747 2 -0.36145600490490637 0.09687363166652072 0.8281720535962042 ['SLC17A9|p.L348Pfs*42|1|0.29|ENSG00000101194|chr20:62965707-62965707|T/-|frameshift_variant'] 45002 19249 IPDDFDWDLI True PC9_epitope_Rep6 1247.5710194221099 1247.56992993586 86.692 2 -0.3615077803900932 0.09688775242131811 0.8282299918619758 ['ENSG00000065970|ENST00000162391|FOXJ2', 'ENST00000539192.1_1_12:8202954-8205443:+|nuORF'] 11951 4146 DHNDGLGNAF True NCI_RA007_Epitope_Rep3 1058.44173658806 1058.4406299358602 22.89 2 -0.36155276944396303 0.09688775242131811 0.8282803345279922 ['ENSG00000271447|ENST00000605424|MMP28'] 86951 18478 QLVQTQCL True PC9_epitope_Rep5 931.4797023199098 931.47860993586 76.097 2 -0.36160521031421644 0.09690187218690345 0.8283390141226484 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN', 'RELN|p.P3161T|1|0.28|ENSG00000189056|chr7:103490792-103490792|G/T|missense_variant'] 1265 4512 AEDIMEKDWNN True NCI_RA007_Epitope_Rep2 1363.5714304282699 1363.5697949037901 22.183 3 -0.3616208971454856 0.09690187218690345 0.8283565668216788 ['ENSG00000078401|ENST00000379375|EDN1', 'EDN1|p.K165Sfs*6|1|0.12|ENSG00000078401|chr6:12294362-12294363|-/GAGTTCAGGAGGCTGTT|frameshift_variant'] 57638 7539 LEEEKGKYQ True H1975_Epitope_Rep1 1122.5557037111398 1122.55460993586 33.993 2 -0.36165141222751673 0.09691768826619965 0.8283907110582606 ['ENSG00000186714|ENST00000335185|CCDC73', 'nc|ENSG00000186714|Q6ZRK6-2|CCDC73'] 25238 13659 FDIAEGVRTVL True NCI_RA007_Epitope_Rep4 1218.66083748602 1218.6597499358602 59.76 2 -0.3617636045183375 0.09699676035373435 0.8285162411298588 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 71974 5021 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 24.434 2 -0.3617805187394083 0.09699676035373435 0.8285351654486669 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 102073 5559 SLREEAVL True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50144993586 27.983 2 -0.36178963799022784 0.09699676035373435 0.8285453683588384 ['PALD1|p.W544R|1|0.09|ENSG00000107719|chr10:70539152-70539152|T/C|missense_variant', 'ENSG00000107719|ENST00000263563|PALD1'] 3436 13988 AGKEDIIEWLS True NCI_RA007_Epitope_Rep1 1259.63976768827 1259.6391749679299 58.435 1 -0.36180216794263914 0.09699676035373435 0.8285593871811737 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.T606Nfs*97|1|0.33|ENSG00000205978|chr14:24409604-24409605|-/A|frameshift_variant'] 38918 7185 HHGAEDATDAF True NCI_RA007_Epitope_Rep5 1169.47376499233 1169.47266993586 34.316 2 -0.3618630086324233 0.09699676035373435 0.8286274557688837 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000414624.6_1_11:61645294-61658904:-|nuORF'] 119509 21720 VASDIQMQLL True PC9_epitope_Rep3 1116.58489566444 1116.58378993586 88.839 2 -0.361876738724682 0.09700577832253546 0.8286428166585827 ['ENSG00000137225|ENST00000398776|CAPN11'] 69412 14723 LTWRVVSP True PC9_epitope_Rep3 956.5443511817998 956.54324993586 61.771 2 -0.3618816621340117 0.09700577832253546 0.8286483248170339 ['ENSG00000164363|ENST00000324642|SLC6A18'] 129140 23813 VQQYYRKLRAF True PC9_epitope_Rep1 1470.80956740838 1470.80846993586 96.394 2 -0.3619268221657532 0.09700577832253546 0.8286988477044406 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'ENST00000482556.5_1_20:47242425-47249020:-|nuORF'] 5549 13778 AMPWFQFYL True NCI_RA007_Epitope_Rep5 1201.5630380210498 1201.5619499358602 59.672 2 -0.3619741796551222 0.09700577832253546 0.8287518275181547 ['nc|ENSG00000121101|Q8IWB6|TEX14'] 5671 5752 APAEQFRGSKR True PC9_epitope_Rep1 1245.65781779425 1245.65617490379 26.942 3 -0.361992511227465 0.09700577832253546 0.8287723350213907 ['ENSG00000111752|ENST00000544916|PHC1'] 100927 9791 SLFFHHIP True PC9_epitope_Rep1 996.5181364339601 996.51702993586 42.523 2 -0.36209256134880796 0.09701989074100013 0.828884256881094 ['ENSG00000117479|ENST00000236137|SLC19A2'] 56638 9200 LDIGTEVFAP True H1975_Epitope_Rep3 1060.54407639828 1060.5429699358601 40.38 2 -0.3621580452422729 0.09701989074100013 0.8289575072042422 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 57910 8366 LEGEGASLSSD True PC9_epitope_Rep1 1063.46694827639 1063.4658499358602 37.015 2 -0.36223682630313714 0.09703570115385289 0.8290456277682672 ['ENST00000571156.1_1_17:78181480-78183436:-|nuORF'] 48837 13715 KDWGKMVSL True PC9_epitope_Rep1 1062.55320161334 1062.55210993586 57.604 2 -0.3624021790745736 0.09711814552839834 0.8292305687963704 ['ENSG00000204703|ENST00000377173|OR2B3'] 5319 9133 ALREAAEV True PC9_epitope_Rep2 857.4606811274898 857.45958993586 40.47 2 -0.36241035052024195 0.09711814552839834 0.8292397077503808 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF'] 79174 9164 PANYADAP True PC9_epitope_Rep3 817.3606327330499 817.35952993586 40.189 2 -0.3624148254275062 0.09711814552839834 0.8292447124712076 ['ENSG00000178814|ENST00000618853|OPLAH'] 75341 12402 NIQELQLIPGP True NCI_RA007_Epitope_Rep1 1220.6764875501597 1220.67538993586 52.216 2 -0.3624997421010754 0.09716726776147624 0.8293396802263707 ['ENSG00000183324|ENST00000331090|REC114'] 29112 22538 FTLFTINV True PC9_epitope_Rep2 953.5222187548899 953.52112993586 92.185 2 -0.36251542143139737 0.09716726776147624 0.8293572148497763 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A'] 122429 7612 VGDVFRGG True PC9_epitope_Rep6 805.4082516318099 805.40714993586 38.565 2 -0.3625747708464033 0.09721808855197045 0.82942358528426 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 69211 20076 LTSLRLKRFGP True PC9_epitope_Rep3 1286.78229003138 1286.78118993586 82.474 2 -0.3625813803751744 0.09723389355742297 0.8294309765575743 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 27564 14083 FNGLFSRLRD True PC9_epitope_Rep5 1223.64110510095 1223.64000993586 59.185 2 -0.3626142877608241 0.09724969800948863 0.8294677755948631 ['ENST00000471717.1_1_7:99772169-99774834:-|nuORF', 'GPC2|p.S268Hfs*34|1|0.07|ENSG00000213420|chr7:100173926-100173926|G/-|frameshift_variant', 'ENSG00000213420|ENST00000292377|GPC2'] 9569 9262 AWLRGARVRPE True H1975_Epitope_Rep1 1309.7367368212897 1309.73509490379 40.538 3 -0.36263908298825687 0.09726379917021165 0.8294955025923602 ['ENST00000572418.1_1_17:3806502-3807261:-|nuORF'] 133977 11722 VYIRGSKIRF True PC9_epitope_Rep1 1237.7295261825295 1237.72789490379 49.964 3 -0.3626608264901838 0.09726379917021165 0.8295198166531018 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 46888 8371 ITLLEQGKEPC True NCI_RA007_Epitope_Rep2 1229.6325741328499 1229.6314699358602 37.202 2 -0.36269310385987674 0.09729710804565507 0.8295559092633082 ['ENSG00000171817|ENST00000316433|ZNF540'] 73088 19266 MREREREQRWR True PC9_epitope_Rep1 1630.8222744337397 1630.8206249037898 78.909 3 -0.36279307777426445 0.09733041575492342 0.8296676952855396 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 45935 8438 ISEIKDEEEDS True H1975_Epitope_Rep2 1292.56197086004 1292.5608699358602 37.407 2 -0.36283928248858316 0.09739873262612471 0.829719356611019 ['ENST00000326105.6_1_1:175013764-175014370:-|nuORF'] 130125 4786 VSDQVQIK True NCI_RA007_Epitope_Rep5 915.50254593947 915.50144993586 25.094 2 -0.36285174854684027 0.09743203739037583 0.8297332945866074 ['nc|ENSG00000108588|Q96A33-2|CCDC47', 'ENSG00000108588|ENST00000225726|CCDC47'] 42492 7555 IEEHHFYFN True NCI_RA007_Epitope_Rep2 1234.54072235334 1234.5396299358601 34.013 2 -0.36289535624283054 0.09744613068669153 0.8297820502792198 ['ENSG00000071991|ENST00000262150|CDH19', 'CDH19|p.S499Y|1|0.27|ENSG00000071991|chr18:66511648-66511648|G/T|missense_variant'] 103561 19157 SPSKPPIQQP True PC9_epitope_Rep1 1077.5818588893299 1077.5807699358602 78.481 2 -0.3629225575636033 0.09744613068669153 0.8298124620416274 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 33579 5715 GLFCCARYSK True NCI_RA007_Epitope_Rep4 1146.5314206229398 1146.52978490379 28.597 3 -0.3629428602103174 0.09745339984247835 0.829835160539698 ['ENSG00000218819|ENST00000405799|TDRD15'] 139579 13826 YLVSKASHIS True PC9_epitope_Rep1 1103.59750895347 1103.59640993586 58.024 2 -0.3629490226364895 0.09745339984247835 0.8298420501111787 ['ENSG00000145982|ENST00000274680|FARS2'] 30332 7557 GAAPEAEAAVP True PC9_epitope_Rep1 981.4767251144498 981.47562993586 33.886 2 -0.36296606467554804 0.09745339984247835 0.8298611028993467 ['TADA2B|p.N227Qfs*46|1|0.24|ENSG00000173011|chr4:7054468-7054469|-/C|frameshift_variant'] 21060 9317 EQVKLMPPAP True H1975_Epitope_Rep1 1108.5950664253198 1108.59396993586 40.744 2 -0.3629775766713677 0.09745339984247835 0.8298739730400413 ['nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.F736Cfs*26|1|0.13|ENSG00000041515|chr13:108964805-108964806|-/GTGTAGAGCTCAGCTCGCGCTGGTGTGGGCGCAA|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16'] 129747 23036 VRQLRLHHRRG True PC9_epitope_Rep4 1426.8494155880999 1426.84777490379 96.831 3 -0.3629801208330237 0.09745339984247835 0.8298768173390455 ['ENST00000307161.5_1_4:187455227-187455620:-|nuORF'] 72323 16028 MILHRARTKTW True PC9_epitope_Rep1 1411.78705814199 1411.78540490379 66.464 3 -0.3629934523850461 0.09745339984247835 0.8298917215454106 ['nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2'] 73708 8475 MYRRWWEQFVQ True PC9_epitope_Rep4 1627.77180200067 1627.7701649037901 40.068 3 -0.3630611689978285 0.09746407882532071 0.829967424191581 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 6072 5196 APLLRHLGLTR True PC9_epitope_Rep6 1245.7669743204099 1245.76531490379 27.741 3 -0.36312888504184576 0.09746407882532071 0.830043122594484 ['ENSG00000183615|ENST00000373582|FAM167B'] 87319 11819 QPRDILCGA True PC9_epitope_Rep5 971.4858503295098 971.48474993586 50.457 2 -0.3631603551419004 0.09746407882532071 0.8300783011498426 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'nc|ENSG00000144028|O75643-2|SNRNP200', 'SNRNP200|p.D137N|1|0.14|ENSG00000144028|chr2:96301689-96301689|C/T|missense_variant'] 96623 11892 SAHLVFVKV True PC9_epitope_Rep4 998.5913013742199 998.59020993586 53.517 2 -0.3631640112721656 0.09746407882532071 0.8300823880695979 ['ENSG00000179820|ENST00000391770|MYADM', 'ENST00000474610.1_1_2:33952107-33952842:-|nuORF'] 31269 15082 GDFGSATF True PC9_epitope_Rep4 800.33408363204 800.3335349679301 65.945 1 -0.3631751843542384 0.09747987399369969 0.8300948775722073 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF'] 45647 6765 IREEERYPP True H1975_Epitope_Rep2 1187.5934862021898 1187.5918349037902 30.937 3 -0.36323000090880964 0.09751316917799828 0.8301561512071798 ['nc|ENSG00000005884|P26006-1|ITGA3'] 56195 11025 LAYAENIAL True PC9_epitope_Rep5 976.52294703088 976.52184993586 47.396 2 -0.36329023337981564 0.09752896293444402 0.8302234759400272 ['ENSG00000196455|ENST00000356763|PIK3R4'] 116981 14572 TVGPRWRF True PC9_epitope_Rep4 1017.5508335445699 1017.54972993586 63.969 2 -0.36348163536099815 0.09757634088721673 0.8304373955699764 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant'] 19208 11383 ELIKDAHLLVE True H1975_Epitope_Rep1 1278.71835236214 1278.71724993586 48.764 2 -0.36354427859184635 0.09757634088721673 0.8305074019667605 ['ENSG00000138095|ENST00000260665|LRPPRC'] 107893 18351 SVVPLSFIS True PC9_epitope_Rep6 947.5327834385901 947.53168993586 83.229 2 -0.3635678843894008 0.09757634088721673 0.8305337815730139 ['ARMS2|p.V31L|1|0.25|ENSG00000254636|chr10:122454818-122454818|G/T|missense_variant'] 130841 6756 VTAVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 32.663 2 -0.3635717411376424 0.0975887170154686 0.8305380914657802 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 112732 19808 TLGVNPLTG True PC9_epitope_Rep5 870.4810822188999 870.47998993586 81.239 2 -0.36357405111475327 0.0975887170154686 0.8305406728452356 ['ENSG00000006695|ENST00000261643|COX10', 'nc|ENSG00000006695|Q12887-2|COX10'] 2543 14651 AEQPWPPLPA True H1975_Epitope_Rep3 1104.56039516876 1104.55928993586 61.722 2 -0.36357708374702863 0.0975887170154686 0.8305440617788162 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 15180 8043 EAAVAAVAV True NCI_RA007_Epitope_Rep5 799.44396843419 799.44286993586 37.627 2 -0.36360842378054464 0.09763779527559055 0.8305790834742834 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.C638Lfs*2|1|0.17|ENSG00000066735|chr14:104173749-104173750|-/T|frameshift_variant'] 30329 5189 GAALQYWTSP True H1975_Epitope_Rep3 1092.52400966004 1092.52290993586 25.055 2 -0.36361165639564397 0.09763779527559055 0.8305826957930995 ['FLI1|p.S420L|1|0.06|ENSG00000151702|chr11:128810888-128810888|C/T|missense_variant'] 79383 7750 PASPALTAA True PC9_epitope_Rep2 797.42831837005 797.4272299358599 35.185 2 -0.36363841281318715 0.09766424634765113 0.8306125946883505 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 112660 10949 TLFPQNPNL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 47.435 2 -0.363667971833637 0.09766424634765113 0.8306456246442534 ['ENSG00000120658|ENST00000690772|ENOX1', 'ENST00000482207.1_1_13:43933927-43935475:-|nuORF'] 8785 15263 AVDPEKIQLYS True H1975_Epitope_Rep1 1261.65541775241 1261.65432993586 63.973 2 -0.36368065236730873 0.09766424634765113 0.8306597939493853 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 106755 6829 STYQFNSP True H1975_Epitope_Rep3 942.4083112014599 942.40720993586 31.223 2 -0.3636972918042187 0.09766424634765113 0.8306783867504285 ['ENST00000505045.1_1_5:26903562-26988455:-|nuORF', 'CDH9|p.R413Gfs*4|1|0.22|ENSG00000113100|chr5:26902493-26902493|G/-|frameshift_variant', 'ENSG00000113100|ENST00000231021|CDH9'] 41690 17705 IAHEIYQKILS True PC9_epitope_Rep1 1313.7343367794501 1313.73268490379 72.897 3 -0.36371607510524195 0.09766424634765113 0.8306993748094003 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 102259 10707 SLSITGTWLD True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 46.074 2 -0.3637514425680929 0.09769752956819931 0.8307388928417302 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|196|3|sense'] 97823 17875 SELLIMAQEL True PC9_epitope_Rep1 1145.60021137541 1145.59910993586 73.549 2 -0.3638058953041098 0.09771160642429756 0.8307997338220998 ['nc|ENSG00000133816|O94851|MICAL2'] 3437 13733 AGKEDIIEWLS True NCI_RA007_Epitope_Rep2 1259.63976768827 1259.6391749679299 58.064 1 -0.363809409915535 0.09771160642429756 0.830803660670706 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.T606Nfs*97|1|0.33|ENSG00000205978|chr14:24409604-24409605|-/A|frameshift_variant'] 131622 8815 VTLSAYITI True PC9_epitope_Rep6 979.55899818643 979.55790993586 43.818 2 -0.364018270944774 0.09774488706940289 0.8310370003095009 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENSG00000175899|ENST00000318602|A2M'] 132158 8424 VTVNKSLL True PC9_epitope_Rep4 872.53311779176 872.53202993586 39.867 2 -0.364072676534969 0.09777816655003499 0.8310977759985048 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'KRT84|p.L150F|1|0.05|ENSG00000161849|chr12:52385138-52385138|G/A|missense_variant', 'KRT72|p.P109T|1|0.13|ENSG00000170486|chr12:52601128-52601128|G/T|missense_variant', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7'] 84804 14919 QEAANRRFC True H1975_Epitope_Rep3 1093.50871103241 1093.50760993586 62.772 2 -0.3641738796163716 0.09780631166468406 0.8312108215030953 ['nc|ENSG00000075399|Q9Y2B5-2|VPS9D1', 'ENSG00000075399|ENST00000389386|VPS9D1'] 92020 17647 RKRRLTKPS True NCI_RA007_Epitope_Rep3 1140.7203584811598 1140.7187249037902 77.379 3 -0.3641896259335506 0.09780631166468406 0.8312284095770737 ['nc|ENSG00000164270|Q13639-4|HTR4'] 6503 9112 APTAEGLAA True PC9_epitope_Rep2 799.4075829254699 799.40648993586 40.39 2 -0.36425150113915855 0.09780631166468406 0.8312975198169846 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 93706 9172 RQVQQVNI True PC9_epitope_Rep3 983.5512274673899 983.55012993586 40.22 2 -0.3642957701839512 0.09780631166468406 0.8313469630994459 ['ENST00000528538.5_3_11:47521091-47521142:-|nuORF'] 879 7446 ADIETDPGI True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 33.586 2 -0.3643905867168814 0.09790956004548237 0.8314528559556219 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 16385 7594 EEISIWDIR True NCI_RA007_Epitope_Rep1 1159.5873381925899 1159.58624993586 33.531 2 -0.3644524240096617 0.09792191435768262 0.8315219125557992 ['ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000472061.1_1_7:99754715-99755074:-|nuORF'] 55777 5432 LAMVFMGAK True NCI_RA007_Epitope_Rep3 966.5030806167798 966.50198993586 28.378 2 -0.3644648934052822 0.09792191435768262 0.8315358372870659 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8', 'ENSG00000221887|ENST00000408945|HMSD'] 97103 15300 SDIEIENGF True H1975_Epitope_Rep1 1022.4556553166999 1022.45454993586 64.12 2 -0.3644987650033306 0.09792191435768262 0.831573661401697 ['ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 25496 11879 FEFSISNQTLK True NCI_RA007_Epitope_Rep2 1312.66631678928 1312.66520993586 50.809 2 -0.3645890869153563 0.09795347210075214 0.8316745178686722 ['ENST00000396408.7_1_19:53912606-53912957:+|nuORF'] 75973 16304 NLVAWSPL True PC9_epitope_Rep2 898.49125297978 898.49070496793 67.958 1 -0.3646758188216968 0.09795347210075214 0.8317713584172836 ['ENST00000517790.1_1_8:128808194-128902837:+|nuORF', 'ENST00000518528.1_1_8:128808194-128808275:+|nuORF', 'ENST00000524165.5_1_8:128808194-128867457:+|nuORF', 'ENST00000517525.1_1_8:128808194-128951828:+|nuORF'] 60591 9611 LHHCWVYYQRQ True H1975_Epitope_Rep1 1531.71428712455 1531.71318993586 41.894 2 -0.3647528773602958 0.09798674152979657 0.8318573921886135 ['ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 116944 5455 TVGATALPR True H1975_Epitope_Rep3 884.50796567308 884.50686993586 26.038 2 -0.36477694386231996 0.09800251871545512 0.8318842606260525 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 91732 5669 RKEDNDEI True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 29.912 2 -0.36479106874917766 0.0980182953492033 0.8319000297403985 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 668 7707 AATLSSAR True NCI_RA007_Epitope_Rep5 775.41881631551 775.41770993586 36.347 2 -0.3648605558632534 0.09803407143107007 0.8319776028071898 ['ENST00000301624.8_1_17:76104411-76104549:+|nuORF'] 134972 7891 WAWRRWWLWTP True NCI_RA007_Epitope_Rep1 1642.8309715592995 1642.8293249037902 34.687 3 -0.3649495217950827 0.09804298781021004 0.8320769145463444 ['ENST00000308064.6_1_11:45673544-45686758:-|nuORF', 'ENST00000531322.1_1_11:45673541-45686758:-|nuORF'] 37432 17189 GVTGYFTVTL True PC9_epitope_Rep4 1056.54916177872 1056.5480699358602 74.122 2 -0.3649539054073741 0.09804298781021004 0.832081807727662 ['ENSG00000170848|ENST00000187910|PSG6', 'nc|ENSG00000170848|Q00889|PSG6', 'ENST00000402456.4_1_19:43414555-43422019:-|nuORF'] 115791 8054 TSDHDGKDNY True H1975_Epitope_Rep2 1150.45269519458 1150.45158993586 35.928 2 -0.36496924246221896 0.09804298781021004 0.8320989274766519 ['ENSG00000197410|ENST00000357232|DCHS2'] 88470 15492 QSSPHNQFTF True NCI_RA007_Epitope_Rep4 1191.5308859456302 1191.5297899358602 67.274 2 -0.36497870200812926 0.09804298781021004 0.8321094864328947 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 66837 5227 LSMNHAYDIVK True NCI_RA007_Epitope_Rep3 1289.64380752289 1289.64217490379 27.563 3 -0.36498570170435535 0.09804298781021004 0.8321172995935792 ['DUSP6|p.D318H|1|0.35|ENSG00000139318|chr12:89349448-89349448|C/G|missense_variant'] 142097 19550 YVPDLDRILL True PC9_epitope_Rep2 1215.68632395787 1215.6852299358602 80.582 2 -0.3650196578455879 0.0980553320975132 0.8321552012397013 ['ENST00000303277.6_1_4:1718369-1718675:-|nuORF'] 76262 6989 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54382490379 32.282 3 -0.36502348566794346 0.0980553320975132 0.8321594737615011 ['ENSG00000174231|ENST00000304992|PRPF8'] 75237 16997 NIDQDINNL True PC9_epitope_Rep1 1057.5040024914501 1057.5034749679298 70.202 1 -0.36504412032861666 0.0980553320975132 0.8321825054169171 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 117641 12418 TVTLWMSL True PC9_epitope_Rep3 949.4942897548899 949.49318993586 52.795 2 -0.36514041952060716 0.09808859276358359 0.832289985488393 ['ENSG00000171714|ENST00000324559|ANO5'] 78582 7722 NYRERERERER True NCI_RA007_Epitope_Rep2 1591.7927481272698 1591.7911049037903 34.663 3 -0.36523447510597157 0.0981184205924527 0.8323949525279579 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant'] 115940 5018 TSGSLPELPP True H1975_Epitope_Rep1 996.5127762699999 996.51166993586 24.374 2 -0.3652389202023052 0.0981184205924527 0.8323999130830916 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'CFAP54|p.L1793Gfs*13|1|0.13|ENSG00000188596|chr12:96658260-96658285|CAGCTTCTGCTGAGAATACAGAAGTT/-|frameshift_variant', 'ENST00000554621.1_1_12:96883387-96894780:+|nuORF'] 120854 19395 VELSPVPID True PC9_epitope_Rep6 967.5226126777098 967.5220649679301 87.256 1 -0.365243554251064 0.0981184205924527 0.8324050844805918 ['ENSG00000196569|ENST00000421865|LAMA2'] 7349 4812 ARPSPQVPA True PC9_epitope_Rep3 921.50321464581 921.50210993586 23.604 2 -0.3653038165242023 0.0981763502526533 0.8324723325879907 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 141454 17778 YTGEGQWEV True PC9_epitope_Rep5 1067.45598966987 1067.4554749679298 73.402 1 -0.36530456880704004 0.0981763502526533 0.832473172055091 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 119558 17133 VATASPISL True PC9_epitope_Rep2 857.48583324617 857.48472993586 71.151 2 -0.3653487916659966 0.0981763502526533 0.8325225190192928 ['ENST00000416600.6_1_20:3846925-3847768:+|nuORF'] 88296 9370 QSEPENPSL True H1975_Epitope_Rep2 999.45090428943 999.44980993586 41.003 2 -0.3653676754683726 0.0981763502526533 0.8325435902815321 ['nc|ENSG00000012048|P38398-6|BRCA1', 'nc|ENSG00000012048|P38398-5|BRCA1', 'nc|ENSG00000012048|P38398-3|BRCA1', 'ENSG00000012048|ENST00000357654|BRCA1', 'nc|ENSG00000012048|P38398-7|BRCA1', 'nc|ENSG00000012048|P38398-8|BRCA1', 'nc|ENSG00000012048|P38398-4|BRCA1'] 39257 4858 HIKENVATLV True PC9_epitope_Rep3 1122.6397081186199 1122.63805490379 23.784 3 -0.3653898568863131 0.0981763502526533 0.8325683406824717 ['ENST00000444644.1_1_1:79215537-79215930:+|nuORF'] 107523 9052 SVPCSFSY True PC9_epitope_Rep2 888.3687548886 888.36764993586 40.165 2 -0.36543630320879006 0.0981763502526533 0.8326201646391755 ['nc|ENSG00000142512|Q96LC7-5|SIGLEC10', 'ENST00000524527.1_1_19:51920201-51920835:-|nuORF', 'nc|ENSG00000142512|Q96LC7-8|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-9|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-6|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-7|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-2|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-4|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-3|SIGLEC10', 'ENSG00000142512|ENST00000339313|SIGLEC10', 'SIGLEC10|p.P46H|1|0.22|ENSG00000142512|chr19:51417366-51417366|G/T|missense_variant', 'SIGLEC10|p.C36S|1|0.2|ENSG00000142512|chr19:51417397-51417397|A/T|missense_variant'] 114281 11256 TPPPGLASA True PC9_epitope_Rep1 809.42831837005 809.4272299358599 48.175 2 -0.3654917152902332 0.0981763502526533 0.8326819895182921 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 102515 17006 SLVNSFLGEF True PC9_epitope_Rep2 1111.5549754351498 1111.5538699358601 70.665 2 -0.36561118555365996 0.09818696784796406 0.8328152751371662 ['nc|ENSG00000103534|Q6UXY8-4|TMC5', 'ENST00000567478.5_1_16:19467998-19503571:+|nuORF', 'nc|ENSG00000103534|Q6UXY8-3|TMC5', 'nc|ENSG00000103534|Q6UXY8-2|TMC5', 'ENSG00000103534|ENST00000542583|TMC5'] 12730 17014 DLEEKFRANAS True NCI_RA007_Epitope_Rep2 1278.62042922602 1278.6193299358602 70.916 2 -0.3656409745504039 0.09818696784796406 0.8328485065623586 ['ENSG00000102794|ENST00000377462|ACOD1'] 82512 5823 PPRPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 27.391 2 -0.3656475438294402 0.09818696784796406 0.8328558348643608 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 44620 23642 ILRLDLAWRDL True H1975_Epitope_Rep3 1382.8034193987799 1382.8023299358601 98.619 2 -0.365679885814279 0.09818696784796406 0.8328919130206535 ['ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 41711 9712 IAKGNNVL True PC9_epitope_Rep6 827.4865019525099 827.48540993586 47.757 2 -0.36579491468348746 0.09825346596968479 0.8330202211346456 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant'] 135619 19363 WLKRRIWRMP True NCI_RA007_Epitope_Rep2 1440.82886338432 1440.82776993586 80.221 2 -0.3658188430809286 0.09825346596968479 0.8330469101193785 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 102874 9875 SPAAVSQF True PC9_epitope_Rep2 805.3970182417701 805.39592993586 43.319 2 -0.3661338083840265 0.09832167832167832 0.8333981547864924 ['KRTAP5-3|p.G76Afs*190|1|0.64|ENSG00000196224|chr11:1608159-1608159|C/-|frameshift_variant', 'KRTAP5-3|p.C47Afs*219|1|0.28|ENSG00000196224|chr11:1608247-1608247|A/-|frameshift_variant'] 88074 18064 QRRHMKRWEYF True PC9_epitope_Rep6 1635.8204835285899 1635.81883490379 82.114 3 -0.36617807916209283 0.09833572252718437 0.8334475161886249 ['ENSG00000198734|ENST00000367797|F5'] 23142 10904 EVKMWRNCL True PC9_epitope_Rep3 1177.57361978809 1177.57198490379 46.924 3 -0.36620887911244004 0.09833572252718437 0.8334818564908093 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF'] 24283 16269 EYTMLAPLDP True H1975_Epitope_Rep2 1148.5423621461198 1148.54126993586 67.791 2 -0.36629119029801177 0.09835148506197228 0.8335736238768943 ['ENSG00000138615|ENST00000261883|CILP'] 28783 10576 FSTNYQSL True PC9_epitope_Rep5 958.43961132974 958.43850993586 45.669 2 -0.3663492489214011 0.09836724704566115 0.833638347906409 ['ENST00000555540.1_1_14:35981656-35982271:-|nuORF'] 132302 14186 VTWYKNQVP True H1975_Epitope_Rep2 1133.58694426977 1133.58584993586 59.718 2 -0.3664829451287075 0.09838300847827987 0.8337873785566777 ['ENSG00000101605|ENST00000356443|MYOM1', 'nc|ENSG00000101605|P52179-2|MYOM1'] 16758 6451 EETLDEGPP True H1975_Epitope_Rep1 985.4240208352498 985.42292993586 29.875 2 -0.36652769540155306 0.09839876935985736 0.8338372569578903 ['ENSG00000100442|ENST00000396062|FKBP3'] 125831 10447 VLADIAKQV True PC9_epitope_Rep2 955.5702315764698 955.56912993586 45.504 2 -0.36661619592671013 0.09842340767671118 0.833935892356539 ['ENSG00000174720|ENST00000344442|LARP7', 'nc|ENSG00000174720|Q4G0J3-3|LARP7'] 140474 19980 YRIREFRQTFR True PC9_epitope_Rep1 1570.84807817542 1570.84642490379 81.678 3 -0.36667705276101487 0.09842340767671118 0.8340037131103152 ['ENSG00000128271|ENST00000337539|ADORA2A'] 136516 19232 WVWAQHRAFR True PC9_epitope_Rep1 1355.69995738975 1355.6983049037901 78.775 3 -0.36668908475521833 0.09842340767671118 0.8340171214294317 ['ENST00000359491.1_1_14:64804837-64805239:-|nuORF'] 113558 13934 TLTTNDIVISK True NCI_RA007_Epitope_Rep2 1203.6710678165498 1203.66996993586 58.855 2 -0.36670280040341274 0.09842340767671118 0.8340324057875469 ['ENSG00000113141|ENST00000417647|IK'] 58095 8015 LEIWMEMAP True PC9_epitope_Rep6 1118.5140392233 1118.5129499358602 40.304 2 -0.3667110035706881 0.09842340767671118 0.8340415470766671 ['nc|ENSG00000214900|Q8WXQ3|LINC01599'] 29912 19011 FVWSGTAEA True PC9_epitope_Rep3 966.4446967101799 966.44358993586 78.348 2 -0.36674250063782404 0.09842340767671118 0.8340766454459912 ['ENSG00000124422|ENST00000261497|USP22'] 71965 4159 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 21.116 2 -0.3667471326828846 0.09843400447427293 0.8340818070103609 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 126888 17101 VLQMTWML True PC9_epitope_Rep2 1020.5136453004799 1020.51254993586 71.028 2 -0.36676537008451215 0.09843400447427293 0.8341021290036054 ['ENST00000471475.1_1_10:70666494-70666578:+|nuORF'] 130456 16956 VSPASFENV True PC9_epitope_Rep1 948.45526139388 948.45471496793 70.044 1 -0.36679684489078457 0.09843400447427293 0.8341372005579389 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 63709 20111 LNANTGLTL True PC9_epitope_Rep1 915.50254593947 915.50144993586 82.187 2 -0.36681532582340703 0.09843400447427293 0.8341577928343458 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant'] 87372 7428 QPSTTGIR True NCI_RA007_Epitope_Rep5 858.4559301002199 858.4553849679301 35.25 1 -0.3668809506547211 0.0984480408263134 0.834230911673838 ['ENSG00000100393|ENST00000263253|EP300'] 18094 7917 EIIAKQGG True NCI_RA007_Epitope_Rep1 814.45486747106 814.45376993586 34.79 2 -0.3669560314662192 0.0984480408263134 0.8343145600384301 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 135389 6011 WHDAENQTV True PC9_epitope_Rep2 1098.47303671634 1098.47192993586 28.512 2 -0.3670847402807457 0.09846379699051014 0.8344579402391286 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 84067 8920 PVYRHTFWQFR True H1975_Epitope_Rep1 1535.77860163327 1535.77696490379 39.215 3 -0.3671021844012367 0.09849702901083537 0.834477371259073 ['nc|ENSG00000173950|Q8NBI6-2|XXYLT1', 'ENSG00000173950|ENST00000310380|XXYLT1'] 6312 17594 APRNRFSL True PC9_epitope_Rep6 959.5300980999899 959.52900993586 80.317 2 -0.36716336348931505 0.09850934064973874 0.8345455157748268 ['ENST00000540643.5_2_22:31892283-31892502:+|nuORF'] 117435 10209 TVQDLFGR True NCI_RA007_Epitope_Rep1 934.4872302284999 934.48612993586 43.722 2 -0.3671912290776179 0.09850934064973874 0.8345765524350817 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 74122 8486 NEALMRSEET True NCI_RA007_Epitope_Rep1 1178.52375195986 1178.52264993586 37.009 2 -0.3672063759977644 0.09850934064973874 0.8345934226593265 ['nc|ENSG00000186575|P35240-2|NF2', 'nc|ENSG00000186575|P35240-4|NF2', 'NF2|p.E522Rfs*20|1|0.22|ENSG00000186575|chr22:29678311-29678312|-/A|frameshift_variant', 'nc|ENSG00000186575|P35240-6|NF2', 'nc|ENSG00000186575|P35240-5|NF2', 'nc|ENSG00000186575|P35240-8|NF2', 'nc|ENSG00000186575|P35240-3|NF2', 'ENSG00000186575|ENST00000338641|NF2'] 139342 17302 YLLLGLLLTCL True H1975_Epitope_Rep3 1233.74066802985 1233.73903490379 72.204 3 -0.36725058751744466 0.09852509436600028 0.8346426626299485 ['ENSG00000137101|ENST00000259633|CD72'] 81507 12460 PLGTASSSV True PC9_epitope_Rep3 817.41814760917 817.41704993586 52.951 2 -0.36735318839400444 0.09853912557229232 0.8347569236706294 ['TTN|p.A8445V|1|0.24|ENSG00000155657|chr2:178714489-178714489|G/A|missense_variant'] 126798 16922 VLPPDIRI True PC9_epitope_Rep5 921.5647522732099 921.56364993586 70.107 2 -0.3673839546507869 0.09853912557229232 0.8347911838460024 ['ENSG00000110060|ENST00000227474|PUS3'] 102548 11893 SLVSRLLAQGP True PC9_epitope_Rep1 1139.6662572196299 1139.6651699358601 50.613 2 -0.3674112654764436 0.09855487794223007 0.8348215951938653 ['ENSG00000204653|ENST00000389208|ASPDH'] 128458 10683 VPSEQRQMLR True PC9_epitope_Rep5 1242.65028988566 1242.64864490379 46.083 3 -0.36744868793623947 0.09856718504280972 0.8348632646112826 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000566903.5_1_16:84212549-84216700:-|nuORF', 'ENST00000564774.5_1_16:84212549-84214094:-|nuORF', 'nc|ENSG00000103168|Q15572-5|TAF1C', 'ENST00000564208.5_1_16:84212549-84215086:-|nuORF', 'nc|ENSG00000103168|Q15572-4|TAF1C'] 13656 8980 DPPSNPVAA True PC9_epitope_Rep2 866.4133965819 866.41228993586 39.896 2 -0.36747706684024073 0.09856718504280972 0.8348948629806778 ['ENSG00000056277|ENST00000370978|ZNF280C'] 34128 13916 GMYLGEIVRQ True PC9_epitope_Rep2 1164.59612905448 1164.59502993586 58.807 2 -0.3675329944593142 0.09856718504280972 0.8349571323908557 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000470920.1_1_10:71018680-71021051:+|nuORF'] 19207 5624 ELIIYKEEL True NCI_RA007_Epitope_Rep3 1148.6328914026801 1148.63125490379 29.112 3 -0.367644511647492 0.0986336315348057 0.8350812830458897 ['ENST00000378535.4_1_12:88890746-88890821:-|nuORF'] 35666 6012 GTEALALAN True NCI_RA007_Epitope_Rep5 858.44469671018 858.44358993586 29.809 2 -0.36765979494271267 0.0986336315348057 0.8350982965130296 ['ENST00000531958.5_1_11:67183879-67184254:+|nuORF'] 23252 8790 EVNYQELQEEY True H1975_Epitope_Rep2 1442.6201544424998 1442.6190499358602 38.774 2 -0.36767536097658926 0.09864593343234035 0.8351156244208597 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF', 'AKAP9|p.V1050Wfs*10|1|0.45|ENSG00000127914|chr7:92003064-92003064|G/-|frameshift_variant'] 125920 13126 VLDCLLDFLP True PC9_epitope_Rep3 1146.59948309942 1146.59838993586 55.512 2 -0.3677133140341271 0.09864593343234035 0.8351578719777963 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A', 'ENSG00000174016|ENST00000308293|TENT5D'] 108680 12040 SYQQPLSI True NCI_RA007_Epitope_Rep3 934.4759968384599 934.47488993586 54.484 2 -0.3677304942529106 0.09864593343234035 0.835176995582762 ['nc|ENSG00000183307|Q9BXQ6-2|TMEM121B', 'ENSG00000183307|ENST00000331437|TMEM121B'] 78867 6716 PAEQRERK True PC9_epitope_Rep1 1012.5413910596799 1012.54028993586 30.636 2 -0.3678405477813276 0.09869490015199958 0.8352994891110032 ['ENSG00000078061|ENST00000377045|ARAF'] 83273 13518 PTAPGLQL True PC9_epitope_Rep5 795.4490538146299 795.44794993586 57.019 2 -0.36786756849734986 0.09869490015199958 0.8353295617474225 ['ENST00000555147.1_1_16:89984433-89984928:+|nuORF'] 70801 16801 LYAPYSTHF True PC9_epitope_Rep1 1097.51819600361 1097.51767496793 69.449 1 -0.36789608452363737 0.09871064677312275 0.8353612975585555 ['ENSG00000013588|ENST00000014914|GPRC5A'] 106067 6535 STAILYSP True NCI_RA007_Epitope_Rep1 850.44363408102 850.44252993586 29.433 2 -0.36790316113051846 0.0987263928440399 0.8353691730314965 ['ENST00000369851.5_1_1:110116570-110116612:+|nuORF'] 79380 5268 PASPAAPAA True PC9_epitope_Rep5 751.38645355807 751.38534993586 25.279 2 -0.36795293994119765 0.09873696347151617 0.8354245694440038 ['ENSG00000053918|ENST00000155840|KCNQ1'] 23538 20341 EVVVRQKRAP True PC9_epitope_Rep1 1180.7040397106798 1180.70294993586 83.072 2 -0.36797109698252095 0.09873696347151617 0.835444774725451 ['ENSG00000260734|ENST00000561754|TLE7'] 73707 10245 MYRRWWEQFVQ True PC9_epitope_Rep3 1627.77180200067 1627.7701649037901 44.357 3 -0.3679922959544227 0.09873696347151617 0.8354683645424982 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 136046 7147 WRENIREQQK True H1975_Epitope_Rep1 1385.71639529953 1385.71474490379 32.515 3 -0.36799503953057777 0.09873696347151617 0.8354714174993931 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000487968.5_1_22:23626151-23631864:+|nuORF'] 19330 4619 ELLCCHVLGGP True NCI_RA007_Epitope_Rep2 1139.54673633391 1139.54562993586 22.592 2 -0.36807468314806335 0.09877017678708686 0.8355600378588502 ['ENST00000431580.1_1_20:25715449-25715602:+|nuORF'] 95332 5261 RVRRRKTRRER True H1975_Epitope_Rep1 1567.97199033227 1567.9708899358602 25.299 2 -0.36809709094083315 0.09878419452887538 0.8355849697582194 ['nc|ENSG00000188368|A6NJB7-2|PRR19', 'ENSG00000188368|ENST00000341747|PRR19'] 46578 7568 ITAPPGTAA True PC9_epitope_Rep2 797.42831837005 797.4272299358599 34.481 2 -0.36812458279803134 0.09878419452887538 0.8356155575049822 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 58540 16235 LEQKDVNSL True PC9_epitope_Rep2 1044.54513902744 1044.5440499358601 67.693 2 -0.3682006613256887 0.09881740527887924 0.8357001980943468 ['ENSG00000123545|ENST00000316149|NDUFAF4'] 43262 4180 IFQLDERRRD True NCI_RA007_Epitope_Rep2 1346.7054962626598 1346.70385490379 20.898 3 -0.36822860137590097 0.09883142063616832 0.8357312806499085 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 89598 18277 QYPLCPRSI True PC9_epitope_Rep1 1075.54845058607 1075.5473499358602 75.091 2 -0.3682386898046144 0.09883142063616832 0.8357425034996263 ['ENST00000525598.1_1_11:118982915-118984090:+|nuORF'] 131230 5046 VTETPYGQVS True H1975_Epitope_Rep2 1079.5135045459897 1079.5124099358602 24.491 2 -0.3683558552815304 0.09884370851673303 0.8358728339657767 ['ENSG00000266714|ENST00000645453|MYO15B', 'ENST00000580701.1_1_17:73590570-73590847:+|nuORF'] 69699 19105 LVEEIFQTAK True PC9_epitope_Rep2 1176.6390394122798 1176.6379499358602 78.858 2 -0.36835988696052796 0.09884370851673303 0.8358773183247005 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF', 'ENST00000494755.1_1_21:47676584-47678938:-|nuORF'] 128517 13225 VPSSIQSI True PC9_epitope_Rep4 829.45453311789 829.45342993586 58.765 2 -0.36837253812323384 0.09884370851673303 0.835891389826752 ['ENST00000452138.3_1_22:32871295-32879887:+|nuORF'] 117797 9206 TVWLCWDMQ True NCI_RA007_Epitope_Rep3 1180.50453716876 1180.5034299358601 43.306 2 -0.3684211911028468 0.09885426854827442 0.835945503031249 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'ENST00000476117.1_1_7:104800923-104844162:-|nuORF'] 3698 3788 AGRPPPAEQTR True NCI_RA007_Epitope_Rep2 1178.6156186290998 1178.61397490379 19.374 3 -0.3684437157742359 0.09885426854827442 0.8359705545126941 ['ENST00000412483.1_1_1:234349769-234350697:-|nuORF'] 31539 6128 GEDPSNAMPSP True H1975_Epitope_Rep2 1100.44443901 1100.4433499358602 28.55 2 -0.36848959778269513 0.09885426854827442 0.8360215814127496 ['nc|ENSG00000116641|Q96N67-7|DOCK7'] 70869 18620 LYEANGQAVP True PC9_epitope_Rep1 1060.5189242795998 1060.5178299358602 76.41 2 -0.36851555827758314 0.09885426854827442 0.8360504516653461 ['nc|ENSG00000004487|O60341|KDM1A'] 18164 16326 EIKKVFASLP True PC9_epitope_Rep2 1130.6699456177398 1130.6688499358602 68.044 2 -0.3685363204151841 0.0988648271044359 0.8360735402439237 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000509600.1_1_4:10117520-10118290:-|nuORF'] 121694 21454 VFLEKPTL True PC9_epitope_Rep4 945.5535188831699 945.55242993586 90.713 2 -0.3685447510188583 0.0988648271044359 0.836082915345741 ['MMP20|p.G278E|1|0.36|ENSG00000137674|chr11:102606655-102606655|C/T|missense_variant'] 41443 15581 HYILHNSFF True PC9_epitope_Rep6 1176.5716285587998 1176.5705299358601 72.142 2 -0.3685500386176893 0.0988648271044359 0.8360887952755652 ['ENSG00000163659|ENST00000295924|TIPARP'] 128080 11557 VPLC[Carbamidomethyl]ILYEK True H1975_Epitope_Rep1 1133.61546779616 1133.6143699358602 49.44 2 -0.3685588335169836 0.0988648271044359 0.8360985753180514 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 12814 20853 DLFRGRHYWVP True PC9_epitope_Rep1 1444.7364024681199 1444.7353099358602 85.037 2 -0.3686120289983823 0.09887883762355489 0.8361577271185251 ['ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENSG00000101473|ENST00000217455|ACOT8'] 94854 8182 RSWRLWDLEAQ True PC9_epitope_Rep1 1458.7367963909398 1458.7356899358601 36.305 2 -0.368668327401632 0.09887883762355489 0.8362203250245824 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 3474 7441 AGLESGAVR True H1975_Epitope_Rep3 858.4559301002199 858.4553849679301 33.6 1 -0.3686919688735184 0.09888766654443222 0.8362466105478688 ['ENST00000591201.5_1_19:1487843-1489828:-|nuORF', 'ENST00000587784.5_1_19:1487843-1490668:-|nuORF'] 1883 4923 AEIEHKVIEA True H1975_Epitope_Rep2 1137.60298825673 1137.60133490379 24.02 3 -0.3687009031216762 0.09888766654443222 0.8362565437963234 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 138174 11122 YGNAAVEL True PC9_epitope_Rep4 835.40758292547 835.40648993586 50.558 2 -0.3687201240295232 0.09888766654443222 0.8362779135512918 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.L1765Ffs*29|1|0.47|ENSG00000136011|chr12:103733013-103733014|-/T|frameshift_variant', 'STAB2|p.E1519Rfs*42|1|0.29|ENSG00000136011|chr12:103715831-103715831|G/-|frameshift_variant'] 122605 13275 VGFLMKNAP True PC9_epitope_Rep3 975.5211732090698 975.52006993586 56.097 2 -0.36873297151082035 0.09888766654443222 0.8362921970607659 ['ENSG00000104549|ENST00000265896|SQLE'] 99784 19540 SIIVFLQGV True PC9_epitope_Rep1 974.5800679841799 974.57896993586 79.983 2 -0.3687371205604747 0.09888766654443222 0.8362968098216574 ['ENST00000394524.7_1_4:114374303-114374375:-|nuORF'] 7071 13409 AQRQRLQEQLK True NCI_RA007_Epitope_Rep1 1396.7898945929599 1396.7887899358602 56.162 2 -0.3687789126352175 0.09893832506810087 0.8363432713753414 ['LRSAM1|p.E320Q|1|0.17|ENSG00000148356|chr9:127479893-127479893|G/C|missense_variant'] 98441 19245 SFFHFM[Oxidation]LFLA True PC9_epitope_Rep4 1274.6158022503398 1274.6147099358602 82.128 2 -0.36880836451096594 0.09894542026050215 0.8363760124786689 ['ENSG00000111897|ENST00000339697|SERINC1'] 25630 14667 FENVARLL True PC9_epitope_Rep3 960.5392658013599 960.53816993586 61.554 2 -0.3688233070202459 0.09894542026050215 0.8363926233242 ['ENSG00000170209|ENST00000303941|ANKK1'] 25742 5998 FESTSGVSA True H1975_Epitope_Rep2 883.3923267841499 883.39177496793 28.051 1 -0.368837131620943 0.09894542026050215 0.8364079911673474 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 67822 17048 LTAFLNGVTV True PC9_epitope_Rep1 1033.5807962601698 1033.5796899358602 70.401 2 -0.3688430530494393 0.09894542026050215 0.8364145735237996 ['ENSG00000169006|ENST00000306928|NTSR2'] 119583 11719 VATKIFQEL True NCI_RA007_Epitope_Rep5 1047.59644632431 1047.5953499358602 51.731 2 -0.3688897294633503 0.09894542026050215 0.8364664580599694 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 21751 7395 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep4 1133.4811592523297 1133.48006993586 35.792 2 -0.3688935058375856 0.09894542026050215 0.8364706556652681 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 82507 4629 PPRPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 24.323 2 -0.36893996431137405 0.09895596913300045 0.8365222946450694 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 11180 7660 DDRNPLAI True PC9_epitope_Rep1 912.4664947839199 912.46538993586 34.287 2 -0.36894239484574254 0.09895596913300045 0.8365249961202085 ['nc|ENSG00000183762|Q96MU8-2|KREMEN1'] 33265 4550 GKIKQVGI True NCI_RA007_Epitope_Rep4 841.5385375253699 841.53744993586 23.904 2 -0.3689744484334801 0.09895596913300045 0.8365606220582611 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 83607 19337 PVDDSWLQV True PC9_epitope_Rep2 1057.5080252427301 1057.5069299358602 79.753 2 -0.368975269060637 0.09895596913300045 0.8365615341246181 ['nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:131010813-131013220:+|nuORF'] 20092 9507 EMIQGHSPFK True PC9_epitope_Rep5 1172.5648289261997 1172.56372993586 41.526 2 -0.36900970326002624 0.09898397402325337 0.836599804326593 ['nc|ENSG00000125388|P32298-3|GRK4', 'nc|ENSG00000125388|P32298-4|GRK4', 'nc|ENSG00000125388|P32298-2|GRK4', 'ENSG00000125388|ENST00000398052|GRK4'] 32950 6459 GIDDC[Carbamidomethyl]YTSAR True NCI_RA007_Epitope_Rep1 1156.48188742731 1156.48078993586 29.146 2 -0.36901209168197374 0.09898397402325337 0.8366024587584756 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000438210.1_1_1:40428398-40429073:+|nuORF', 'ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 19605 16739 ELQPVPSP True PC9_epitope_Rep1 865.4545331178899 865.45342993586 69.215 2 -0.36901723144758386 0.09898397402325337 0.8366081709367307 ['ENST00000542440.5_1_12:122268574-122269003:+|nuORF'] 106423 4620 STIKEVAQA True PC9_epitope_Rep4 945.5131106231698 945.51200993586 24.281 2 -0.3690378023716719 0.09898397402325337 0.8366310324556216 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 19303 17168 ELKREARNLL True PC9_epitope_Rep2 1240.72516907808 1240.7235149037901 71.296 3 -0.3691610585795729 0.0990520747865859 0.8367680006978574 ['ENSG00000162408|ENST00000377705|NOL9'] 103734 18714 SPVLCVPGVT True PC9_epitope_Rep1 970.51575347546 970.51464993586 76.772 2 -0.3692355866541623 0.09908007052210799 0.8368508092865138 ['ENST00000485230.5_2_3:112930474-112968600:+|nuORF', 'ENST00000495514.5_2_3:112930393-112968640:+|nuORF'] 33145 4275 GISYLGRDR True NCI_RA007_Epitope_Rep4 1035.5461420869499 1035.54504993586 22.778 2 -0.369238735439154 0.09908007052210799 0.8368543077434903 ['ENSG00000068354|ENST00000376771|TBC1D25'] 115657 8116 TRWSPIRAEER True H1975_Epitope_Rep1 1399.7320453636696 1399.7303849037899 36.162 3 -0.3693500321794477 0.09908007052210799 0.8369779547126975 ['FRMD7|p.P506T|1|0.29|ENSG00000165694|chrX:132078501-132078501|G/T|missense_variant'] 130105 13627 VSDPNLIHV True PC9_epitope_Rep2 992.52909504048 992.52798993586 57.708 2 -0.369384658365828 0.09908007052210799 0.8370164195671344 ['ENSG00000115760|ENST00000421745|BIRC6'] 57179 13655 LDVEFSVP True PC9_epitope_Rep1 904.45419876472 904.45310993586 57.379 2 -0.3694584968533554 0.0991289776396865 0.8370984379356992 ['ENST00000506067.1_1_9:99660395-99681090:-|nuORF'] 26672 9375 FISNQTLQ True NCI_RA007_Epitope_Rep1 949.48689587533 949.48578993586 40.459 2 -0.36950759971101604 0.0991289776396865 0.8371529759989825 ['ENST00000377865.6_1_13:67799697-67799736:-|nuORF'] 142504 21271 YYIFIPSKF True PC9_epitope_Rep3 1176.6219327961599 1176.62029490379 87.113 3 -0.36963924121659847 0.0991761502478531 0.8372991713005624 ['ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 130892 18002 VTDDLVCLVY True H1975_Epitope_Rep1 1138.55801221026 1138.5569099358602 75.005 2 -0.36964472472327997 0.0991761502478531 0.8373052604836358 ['ENSG00000143742|ENST00000304786|SRP9'] 87889 10065 QRIDEFESM-[Oxidation] True PC9_epitope_Rep5 1169.5022886197298 1169.50118993586 43.695 2 -0.36966479880632286 0.0991761502478531 0.8373275514502234 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 54693 19133 KYLVIGDLLF True NCI_RA007_Epitope_Rep1 1179.69034670915 1179.68924993586 78.563 2 -0.36966587819643454 0.0991901420742137 0.8373287500258245 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 109001 7782 TAGVFNVTL True H1975_Epitope_Rep3 920.4967322830399 920.49562993586 34.919 2 -0.3696741642544399 0.0991901420742137 0.837337950966393 ['nc|ENSG00000184459|Q8NFQ6-2|BPIFC', 'BPIFC|p.F424Lfs*4|1|0.05|ENSG00000184459|chr22:32417137-32417138|-/TGAATCC|frameshift_variant', 'ENSG00000184459|ENST00000300399|BPIFC'] 74635 11770 NGKRREPWNPC True H1975_Epitope_Rep1 1355.6516868679898 1355.6505899358601 50.266 2 -0.3697730695170616 0.09923384352257457 0.8374477686292181 ['DEFB116|p.S33R|1|0.11|ENSG00000215545|chr20:31303422-31303422|G/T|missense_variant'] 94247 9011 RRQNLYIWRFR True NCI_RA007_Epitope_Rep2 1606.89569707418 1606.89349987172 39.652 4 -0.36978725090461845 0.09923384352257457 0.8374635134684137 ['ENST00000521082.5_1_7:23205510-23207476:+|nuORF'] 136507 9095 WVVGHSYI True PC9_epitope_Rep4 959.48650195251 959.48540993586 42.57 2 -0.36983050355588026 0.09923384352257457 0.8375115327062359 ['ENSG00000111058|ENST00000548058|ACSS3', 'nc|ENSG00000111058|Q9H6R3-2|ACSS3'] 83497 10365 PTSAASLPP True NCI_RA007_Epitope_Rep5 839.4388830537499 839.43833496793 46.498 1 -0.36983707236011587 0.09923384352257457 0.8375188251669721 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L'] 696 13309 AAVDAGMAM True PC9_epitope_Rep2 835.35681030591 835.35570993586 56.469 2 -0.36984240539868557 0.09923384352257457 0.8375247456750337 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 12476 4428 DKDDKEDEKEK True NCI_RA007_Epitope_Rep4 1377.62596809893 1377.62431490379 23.394 3 -0.36987110835125697 0.09926701570680628 0.837556609706764 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46'] 126652 5659 VLNSC[Carbamidomethyl]RNEKE True H1975_Epitope_Rep3 1247.59283485862 1247.59172993586 26.797 2 -0.3699925759616999 0.09929152270268383 0.8376914407537152 ['SOX6|p.G533V|1|0.16|ENSG00000110693|chr11:16046539-16046539|C/A|missense_variant'] 55609 19975 LAIGASFTV True PC9_epitope_Rep4 877.49091862661 877.49037496793 84.967 1 -0.37007302218708626 0.09929152270268383 0.8377807249506618 ['nc|ENSG00000104635|Q15043-3|SLC39A14', 'nc|ENSG00000104635|Q15043-2|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 113546 19892 TLTQVSTWF True PC9_epitope_Rep4 1081.54441075145 1081.5433099358602 84.647 2 -0.3700848661624827 0.09929152270268383 0.8377938692858496 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5', 'ENSG00000159387|ENST00000290552|IRX6', 'ENSG00000113430|ENST00000231357|IRX4', 'nc|ENSG00000113430|P78413-2|IRX4', 'ENSG00000177508|ENST00000329734|IRX3', 'ENST00000558180.2_1_16:54318400-54319510:-|nuORF', 'IRX3|p.L245Pfs*3|1|0.36|ENSG00000177508|chr16:54285149-54285150|-/C|frameshift_variant'] 57881 12884 LEFMFKFTRRE True H1975_Epitope_Rep1 1502.77040501834 1502.76930993586 54.629 2 -0.3700925145123007 0.09929152270268383 0.8378023572392554 ['ENSG00000236279|ENST00000422142|CLEC2L'] 31508 6879 GEDEPQLAP True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 31.38 2 -0.3701043983773903 0.09929152270268383 0.8378155454857144 ['ENSG00000134115|ENST00000446702|CNTN6'] 136656 8675 WWRRRWTRSQW True PC9_epitope_Rep6 1702.8705449554998 1702.86889490379 43.214 3 -0.3701092336599249 0.09929152270268383 0.8378209114297961 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 10620 12533 CNNRGVCLDQY True H1975_Epitope_Rep3 1283.5386908313499 1283.53758993586 53.406 2 -0.37014445748989905 0.09930723995323433 0.8378599999055913 ['ENSG00000136011|ENST00000388887|STAB2'] 130842 9588 VTAVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 41.736 2 -0.37016683357673247 0.09931429169647375 0.8378848300265309 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 13655 8872 DPPSNPVAA True PC9_epitope_Rep2 866.4133965819 866.41228993586 39.481 2 -0.3701741160491501 0.09931429169647375 0.8378929110159496 ['ENSG00000056277|ENST00000370978|ZNF280C'] 16053 16513 EDWVNAIQFVP True H1975_Epitope_Rep2 1316.6401020414398 1316.63900993586 68.738 2 -0.37020966697948504 0.09931429169647375 0.8379323588926408 ['MKRN1|p.E171Q|1|0.51|ENSG00000133606|chr7:140459740-140459740|C/G|missense_variant'] 126915 6110 VLQSTQSP True PC9_epitope_Rep5 858.4446967101799 858.44358993586 28.489 2 -0.3702257890817606 0.09931429169647375 0.8379502475849544 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 56320 22828 LDAYSTLIF True PC9_epitope_Rep4 1041.53826274185 1041.53767496793 96.032 1 -0.3702303303485188 0.09931429169647375 0.8379552863909014 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 6596 13159 APVPVVVSS True PC9_epitope_Rep4 853.49091862661 853.48982993586 58.514 2 -0.37024978525279795 0.09931429169647375 0.8379768724017921 ['ENSG00000142235|ENST00000600059|LMTK3'] 65984 7931 LSDYKEKQMLK True NCI_RA007_Epitope_Rep2 1381.7275371468497 1381.72588490379 35.482 3 -0.37028644676993266 0.09934745437414942 0.838017548245351 ['ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000166351|ENST00000299443|POTED'] 127160 8248 VLVAFCVLVP True NCI_RA007_Epitope_Rep5 1058.6198246211798 1058.61872993586 38.404 2 -0.37037958904546125 0.09944867052829925 0.8381208798434968 ['OR2B11|p.F210C|1|0.12|ENSG00000177535|chr1:247451354-247451354|A/C|missense_variant'] 69027 10336 LTQEQLHQL True PC9_epitope_Rep2 1108.58767254576 1108.58656993586 45.084 2 -0.37038602260552006 0.09944867052829925 0.8381280167006425 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1'] 91121 12255 RFVEKYTEL True PC9_epitope_Rep2 1183.62372370131 1183.62208490379 52.449 3 -0.37044981014269274 0.09946438229495612 0.8381987737596723 ['ENSG00000181610|ENST00000313608|MRPS23'] 134970 4313 WAWRCFRRAQR True NCI_RA007_Epitope_Rep4 1534.78403845022 1534.78185987172 22.933 4 -0.37060203108686285 0.09951498656617468 0.8383676004959351 ['ENST00000442820.5_1_1:163291810-163292704:+|nuORF', 'ENST00000524800.5_1_1:163291810-163295872:+|nuORF'] 33931 11162 GLRPQLVA True PC9_epitope_Rep6 852.5181364339599 852.51702993586 53.887 2 -0.37065027204552514 0.09952722387955548 0.8384210963410115 ['ENST00000543196.6_1_12:51773598-51777285:-|nuORF', 'ENST00000356317.7_1_12:51773598-51784704:-|nuORF'] 102569 11855 SLVWGAEAVQA True PC9_epitope_Rep1 1129.5767735088898 1129.57566993586 50.465 2 -0.37068874538309776 0.09952722387955548 0.8384637578991696 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 94556 7212 RRRWHWHWPRP True NCI_RA007_Epitope_Rep3 1668.87629904228 1668.87520993586 35.48 2 -0.3707082225558154 0.09952722387955548 0.8384853544548759 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 30468 18930 GAFYMFYF True PC9_epitope_Rep1 1044.44152590604 1044.44042993586 77.599 2 -0.37079478312623043 0.09956037821429818 0.8385813265863115 ['ENST00000556431.1_1_14:105225902-105225959:+|nuORF'] 114690 6940 TQGSYMCEC True H1975_Epitope_Rep2 1020.33508888516 1020.33398993586 31.615 2 -0.3709072418031301 0.09958831943620695 0.8387059945051797 ['ENSG00000134250|ENST00000256646|NOTCH2', 'NOTCH2|p.E1495*|1|0.11|ENSG00000134250|chr1:119925333-119925334|-/A|frameshift_variant'] 15412 10779 EAIWCHQCT True H1975_Epitope_Rep2 1089.43718588493 1089.43608993586 46.492 2 -0.3709175066968921 0.09958831943620695 0.8387173727946668 ['ENSG00000283992|ENST00000317543|SLURP2', 'nc|ENSG00000180155|P0DP58-2|LYNX1'] 95556 19665 RWSHRYDEWIY True NCI_RA007_Epitope_Rep1 1609.7426100473697 1609.7415099358602 80.683 2 -0.3709244655318636 0.09958831943620695 0.8387250863311208 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 91490 7475 RHRSWWRERWP True H1975_Epitope_Rep3 1650.83924482722 1650.8381499358602 33.731 2 -0.37095130918242236 0.09958831943620695 0.8387548404935351 ['ENST00000466885.5_1_20:61872851-61879872:-|nuORF', 'ENSG00000101198|ENST00000370316|NKAIN4'] 61610 22479 LKLQVDQWKVP True PC9_epitope_Rep3 1352.78162132504 1352.7805299358602 91.74 2 -0.3709906094955333 0.09960402602613079 0.8387983997946314 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 8840 11987 AVELQEKV True PC9_epitope_Rep4 914.5072969667399 914.50618993586 53.9 2 -0.3710375148889651 0.09965461903432878 0.838850385015581 ['ENST00000492741.5_1_13:20346451-20346499:-|nuORF'] 40688 17931 HRRRLGGGG True NCI_RA007_Epitope_Rep2 964.5427284723597 964.54162993586 74.484 2 -0.3710669405691766 0.09968255075699435 0.8388829956281086 ['ENST00000423968.6_1_3:138067537-138091710:+|nuORF'] 46479 8506 ISVHCNLRLP True PC9_epitope_Rep1 1150.6280978891 1150.62646490379 37.554 3 -0.3711539100954295 0.09968255075699435 0.8389793700435452 ['ENST00000379477.5_1_13:41835935-41837507:-|nuORF'] 127785 4644 VPDRFTGSG True NCI_RA007_Epitope_Rep3 934.4508447197799 934.44974993586 25.19 2 -0.37118047951296307 0.09968255075699435 0.8390088101684312 ['CON__Q05B55'] 141778 19580 YVAVQHFSL True PC9_epitope_Rep1 1062.54983048506 1062.5487299358601 80.142 2 -0.37120123103790775 0.09968255075699435 0.8390318029824637 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 66331 7869 LSGAAKQP True PC9_epitope_Rep1 770.42865272322 770.42754993586 35.094 2 -0.37126469191798817 0.09969477631464202 0.8391021135348992 ['nc|ENSG00000164616|Q9UKT6|FBXL21P'] 44578 20080 ILPQDKVII True PC9_epitope_Rep1 1037.6484818971699 1037.64738993586 82.065 2 -0.3712717068627626 0.09969477631464202 0.8391098852242687 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENST00000484023.1_1_3:194151670-194152613:-|nuORF'] 78565 6692 NYQKRFQNL True PC9_epitope_Rep4 1209.6254550368096 1209.62380490379 32.924 3 -0.3712926174109849 0.09969477631464202 0.8391330510273239 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 14281 17522 DSTLIMQLLR True H1975_Epitope_Rep1 1188.6536439305999 1188.6525499358602 72.898 2 -0.3713061806988283 0.09970700059297499 0.8391480767545871 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'SDC4-YWHAB|1|fusion', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 136515 23476 WVWALLLLAAL True PC9_epitope_Rep2 1267.76926573619 1267.7676149037902 95.771 3 -0.37132272764530694 0.09970700059297499 0.8391664074270035 ['ENSG00000138207|ENST00000371464|RBP4'] 69517 10770 LVCFLLLP True PC9_epitope_Rep3 916.5455970517598 916.54448993586 46.383 2 -0.37133770717432835 0.09970700059297499 0.8391830013174684 ['ENSG00000131183|ENST00000324417|SLC34A1'] 142255 13528 YWRRREEEERW True NCI_RA007_Epitope_Rep2 1693.80733556225 1693.8056849037903 57.262 3 -0.371374052925921 0.0997384025113359 0.8392232625092004 ['ENSG00000056097|ENST00000265069|ZFR'] 125341 8131 VIQEKEKKGKE True H1975_Epitope_Rep1 1314.7507151195798 1314.74960993586 36.214 2 -0.37137426585125716 0.0997384025113359 0.839223498365848 ['ENSG00000089048|ENST00000617257|ESF1'] 107211 17357 SVIPVINKI True PC9_epitope_Rep4 981.62226714933 981.6211699358599 74.767 2 -0.37138138225168055 0.0997523630148931 0.8392313811331928 ['ENST00000506793.5_1_4:44680541-44700695:+|nuORF', 'ENSG00000151806|ENST00000281543|GUF1'] 88500 10358 QSVIRSNS True NCI_RA007_Epitope_Rep2 889.46174375665 889.46119496793 44.881 1 -0.37139161000564813 0.0997523630148931 0.8392427101653323 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 60708 17337 LHQEVSVLV True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 71.5 2 -0.37142700879569635 0.09981863839285714 0.839281919157819 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 20203 6056 ENIRKQFQSQ True NCI_RA007_Epitope_Rep1 1276.6523980606398 1276.6513099358601 27.595 2 -0.3714383084869718 0.09981863839285714 0.8392944346572371 ['ENSG00000038210|ENST00000264864|PI4K2B'] 133452 13732 VVYGGGAAEI True PC9_epitope_Rep4 934.4759968384599 934.47488993586 60.717 2 -0.3716173898213735 0.0999215275961287 0.8394927551688482 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 58032 19855 LEHYILEL True PC9_epitope_Rep2 1028.5542471591598 1028.5531499358601 81.764 2 -0.3716665809877372 0.09993025283347864 0.8395472213286571 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L', 'NUP210L|p.Q297K|1|0.18|ENSG00000143552|chr1:154135934-154135934|G/T|missense_variant'] 23276 20714 EVPRRKLRP True H1975_Epitope_Rep2 1149.7094594442897 1149.7083699358602 85.782 2 -0.3716822439296765 0.09993025283347864 0.8395645629914371 ['ENST00000498040.5_1_21:45148712-45148838:+|nuORF'] 113325 11051 TLRLRRQPKYP True PC9_epitope_Rep4 1426.8521009267 1426.85044490379 50.283 3 -0.37170389970628825 0.09993025283347864 0.8395885390798528 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF'] 79473 12674 PAWFRCLK True PC9_epitope_Rep2 1019.5374919795498 1019.53638993586 54.059 2 -0.37170945089083135 0.09993025283347864 0.8395946849144457 ['ENSG00000135763|ENST00000258243|URB2', 'URB2|p.L474Ffs*10|1|0.14|ENSG00000135763|chr1:229636030-229636031|-/T|frameshift_variant'] 122484 12198 VGEIHMKTMP True PC9_epitope_Rep2 1141.56238639805 1141.56128993586 52.232 2 -0.3717193603691191 0.09993025283347864 0.8396056557742239 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'nc|ENSG00000034053|Q99767-2|APBA2', 'ENSG00000034053|ENST00000683413|APBA2'] 102892 6176 SPAPPGPQA True PC9_epitope_Rep3 820.40791727864 820.40682993586 28.798 2 -0.37185179312908945 0.09998081986364667 0.8397522564664415 ['ENSG00000104881|ENST00000360957|PPP1R13L', 'PPP1R13L|p.G62V|1|0.14|ENSG00000104881|chr19:45398018-45398018|C/A|missense_variant', 'ENST00000585905.1_1_19:45898523-45909561:-|nuORF'] 3596 17429 AGNLTDLPNL True PC9_epitope_Rep2 1026.53457434374 1026.53346993586 72.293 2 -0.3718867433992098 0.09999476923613412 0.8397909405983813 ['ENSG00000146859|ENST00000275767|TMEM140'] 23007 14836 EVFENYFP True PC9_epitope_Rep1 1043.46001242115 1043.4589099358602 61.885 2 -0.3718895161100164 0.09999476923613412 0.8397940094344732 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT', 'ENST00000519705.1_1_8:43052051-43054709:+|nuORF'] 126237 7144 VLGQKQPT True NCI_RA007_Epitope_Rep5 869.49706663621 869.49596993586 34.155 2 -0.37217582710965813 0.10013076453665766 0.8401108238892572 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16', 'ENST00000510995.1_1_5:79729945-79735859:+|nuORF'] 73410 20563 MTPKQILQV True PC9_epitope_Rep3 1056.6001518057599 1056.5990499358602 84.361 2 -0.3721893892493934 0.10013076453665766 0.8401258272383076 ['ENSG00000171456|ENST00000375687|ASXL1', 'ASXL1|p.G643Rfs*15|1|0.29|ENSG00000171456|chr20:32434637-32434638|-/T|frameshift_variant', 'nc|ENSG00000171456|Q8IXJ9-2|ASXL1', 'ENST00000470145.2_1_20:30954213-31016074:+|nuORF'] 14579 6941 DTWESLQK True NCI_RA007_Epitope_Rep1 1005.47672511445 1005.47562993586 31.003 2 -0.37231584624639225 0.10014645372759606 0.840265706162736 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 66793 14613 LSLSSETKPKL True PC9_epitope_Rep4 1201.69180326113 1201.69015490379 64.139 3 -0.37243115316127073 0.10015690376569038 0.8403932257142452 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF'] 17956 8615 EICVNNTP True PC9_epitope_Rep6 888.40111764604 888.40002993586 42.953 2 -0.3724475127241184 0.10015690376569038 0.8404113159751198 ['ENST00000336139.8_1_11:123597023-123597197:-|nuORF'] 91882 19500 RKKRMKMWIWP True NCI_RA007_Epitope_Rep2 1558.87409932458 1558.8730099358602 80.779 2 -0.372483026963865 0.10015690376569038 0.8404505855807345 ['ENST00000446197.7_1_14:24584891-24586136:+|nuORF', 'ENST00000560901.5_1_14:24584114-24586206:+|nuORF', 'ENST00000559382.5_2_14:24584130-24586206:+|nuORF', 'ENST00000557802.5_1_14:24584825-24587275:+|nuORF'] 80671 4892 PGTPRMTWPQ True H1975_Epitope_Rep1 1169.5651632793702 1169.56351490379 23.893 3 -0.3724972302088888 0.10015690376569038 0.84046629004907 ['ENST00000533603.5_1_11:75283563-75283611:+|nuORF'] 40064 9886 HPTWALKEA True PC9_epitope_Rep3 1051.5450794577898 1051.54398993586 42.985 2 -0.37257029907659517 0.10018827795404624 0.8405470759728935 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 90679 4946 REQERAYIV True H1975_Epitope_Rep2 1162.6094706195 1162.60783490379 24.107 3 -0.3725741040644138 0.10018827795404624 0.8405512825419773 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'SF1|p.Y461Lfs*151|1|0.2|ENSG00000168066|chr11:64767212-64767213|-/A|frameshift_variant', 'nc|ENSG00000168066|Q15637-3|SF1', 'SF1|p.T253Pfs*10|1|0.4|ENSG00000168066|chr11:64769246-64769246|C/-|frameshift_variant', 'ENST00000482693.1_1_11:64540804-64545891:-|nuORF'] 5521 12564 ALYQHANVV True PC9_epitope_Rep5 1013.5294293936499 1013.52832993586 53.328 2 -0.37261277486317046 0.10020221741859006 0.8405940331270356 ['nc|ENSG00000006071|Q09428-2|ABCC8', 'ENSG00000006071|ENST00000389817|ABCC8', 'ABCC8|p.A840T|1|0.21|ENSG00000006071|chr11:17412704-17412704|C/T|missense_variant'] 73706 10148 MYRRWWEQFVQ True PC9_epitope_Rep3 1627.77180200067 1627.7701649037901 43.988 3 -0.37261576761367005 0.10020221741859006 0.8405973414955515 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 40999 6552 HTFCRLCLP True NCI_RA007_Epitope_Rep1 1088.52594131968 1088.5248499358602 29.5 2 -0.37263488893247293 0.10020742186819125 0.8406184789624338 ['nc|ENSG00000204610|Q9C019-2|TRIM15', 'ENSG00000204610|ENST00000376694|TRIM15'] 100072 13962 SIRRWSYEMFR True PC9_epitope_Rep1 1529.7561519365297 1529.7544949037901 58.541 3 -0.37263525657724467 0.10020742186819125 0.8406188853647734 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant'] 132014 7957 VTSSPNAI True PC9_epitope_Rep2 787.40758292547 787.40648993586 35.97 2 -0.37265281787370186 0.10020742186819125 0.8406382976946919 ['ENSG00000163810|ENST00000296125|TGM4', 'TGM4|p.Y343Lfs*33|1|0.64|ENSG00000163810|chr3:44903932-44903933|-/A|frameshift_variant'] 75921 6425 NLRRVHPV True H1975_Epitope_Rep3 989.58828168245 989.58718993586 29.69 2 -0.3726596225896368 0.10020742186819125 0.8406458194977069 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A'] 56884 7928 LDPSRESIP True H1975_Epitope_Rep2 1012.5189242795999 1012.51782993586 35.44 2 -0.3726864090010449 0.10020742186819125 0.8406754278254944 ['nc|ENSG00000291104|Q96KV6|BTN2A3P'] 9018 9669 AVGVLKAV True PC9_epitope_Rep5 755.49052470379 755.48942993586 42.158 2 -0.37269537212629467 0.10020742186819125 0.8406853348987324 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF', 'ENST00000468035.1_1_7:77394853-77402638:+|nuORF', 'RSBN1|p.Q605E|1|0.06|ENSG00000081019|chr1:113768235-113768235|G/C|missense_variant', 'ENST00000462800.1_1_7:77397938-77402638:+|nuORF', 'PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'PTPN12-RSBN1L|8|fusion', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L', 'ENSG00000187257|ENST00000334955|RSBN1L'] 14594 13472 DTYDCDEY True H1975_Epitope_Rep2 1022.31750716138 1022.31640993586 56.954 2 -0.37274337991878786 0.10020742186819125 0.8407383959903235 ['ENSG00000197961|ENST00000320451|ZNF121'] 36865 22307 GVLKVFLENV True PC9_epitope_Rep5 1116.6542955536 1116.6531899358602 90.811 2 -0.3728012671422871 0.1002231053475563 0.8408023705247878 ['ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000158406|ENST00000377727|H4C8'] 3401 14537 AGIEQEGYWL True NCI_RA007_Epitope_Rep3 1164.5451390274397 1164.5440499358601 64.495 2 -0.372869788187271 0.10023180019868588 0.8408780887404896 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 65171 7256 LQQAVIYEREP True NCI_RA007_Epitope_Rep1 1344.7037649271601 1344.70266993586 32.214 2 -0.37290740203520556 0.10023180019868588 0.8409196495167492 ['ENSG00000178750|ENST00000315099|STX19'] 61172 11834 LILCFQRM True PC9_epitope_Rep4 1022.54052875466 1022.5394299358601 53.291 2 -0.3729524995799167 0.10023180019868588 0.8409694756380832 ['ENST00000464491.5_1_2:172180771-172182690:-|nuORF'] 59764 10767 LGEEEENQRKK True PC9_epitope_Rep5 1358.6790067312998 1358.67736490379 46.407 3 -0.37296593137706524 0.10023180019868588 0.8409843150200226 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'ENST00000462890.1_1_11:107219611-107224429:-|nuORF'] 109209 7641 TARCCDLP True H1975_Epitope_Rep2 877.3786083796499 877.37750993586 34.342 2 -0.37296695438960414 0.10023180019868588 0.8409854452246489 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 13255 20038 DLSTSDEDDLY True H1975_Epitope_Rep2 1271.50412163075 1271.50302993586 83.057 2 -0.3729914197446536 0.10026316248104707 0.8410124734681899 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 95230 25220 RVLKIPRAV True PC9_epitope_Rep1 1050.7025831587 1050.70148993586 101.89 2 -0.37301888019080753 0.10026316248104707 0.8410428091561205 ['ENSG00000102010|ENST00000348343|BMX'] 71234 23473 LYPGIVTFVI True PC9_epitope_Rep5 1120.65323292444 1120.65212993586 95.275 2 -0.3730938336978038 0.10027884280237016 0.8411256030956659 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1'] 128639 8721 VPVDTGVAA True PC9_epitope_Rep6 827.4388830537498 827.43778993586 43.404 2 -0.3732024061275817 0.10036423206287795 0.8412455128853396 ['TPD52L2-PDZRN4|1|fusion', 'nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 71964 4067 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 20.77 2 -0.3732147649829946 0.10037816077932489 0.8412591607893823 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 137395 15812 YDYKQGHW True PC9_epitope_Rep5 1095.47739382079 1095.4762899358602 65.81 2 -0.3732245158495037 0.10037816077932489 0.8412699284715308 ['ENSG00000181458|ENST00000323523|TMEM45A'] 9252 17607 AVPEKLQPLL True PC9_epitope_Rep5 1106.6699456177398 1106.6688499358602 72.734 2 -0.37324948305967215 0.1003903391070993 0.841297498382632 ['ENSG00000179933|ENST00000319074|C14orf119'] 69835 20853 LVGSVSGFY True PC9_epitope_Rep5 927.47018318203 927.46963496793 85.26 1 -0.3732614933855519 0.1003903391070993 0.8413107602769949 ['ENST00000411500.5_1_6:32520814-32525810:-|nuORF'] 126464 12529 VLLFMQLVP True PC9_epitope_Rep1 1058.61982462118 1058.61872993586 53.064 2 -0.3732666150260136 0.1003903391070993 0.8413164155438101 ['ENSG00000197375|ENST00000245407|SLC22A5', 'nc|ENSG00000197375|O76082-3|SLC22A5', 'ENST00000448810.5_1_5:131726469-131729504:+|nuORF', 'nc|ENSG00000197375|O76082-2|SLC22A5', 'ENST00000475308.1_1_5:131726319-131729961:+|nuORF', 'ENST00000461013.5_1_5:131719758-131729961:+|nuORF'] 9238 18146 AVPDGPLQEV True PC9_epitope_Rep1 1023.52367530687 1023.5225699358599 74.589 2 -0.37332754805328383 0.10040601529963232 0.8413836931675849 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 98879 7149 SGVPEALDSDG True NCI_RA007_Epitope_Rep5 1045.45638359269 1045.45528993586 34.174 2 -0.3733443576447927 0.10041994110369583 0.841402251725753 ['ENSG00000198746|ENST00000361720|GPATCH3'] 20753 19430 EQFFILTG True PC9_epitope_Rep4 953.4858332461698 953.48472993586 82.85 2 -0.3733861178114324 0.10041994110369583 0.8414483543878888 ['ENSG00000130948|ENST00000375263|HSD17B3', 'nc|ENSG00000130948|P37058-2|HSD17B3'] 140132 5235 YQQRNITSP True H1975_Epitope_Rep2 1105.55162139021 1105.5505299358601 25.204 2 -0.3734864406208992 0.10057501306847882 0.8415590949487314 ['nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 102023 10007 SLQSRARTL True PC9_epitope_Rep1 1030.5883412520998 1030.5872499358602 43.359 2 -0.37367173848472457 0.1006412043490382 0.841763580371155 ['nc|ENSG00000061794|P82673-2|MRPS35', 'MRPS35|p.N275Yfs*6|1|0.04|ENSG00000061794|chr12:27755299-27755300|-/ATATC|frameshift_variant', 'ENSG00000061794|ENST00000081029|MRPS35', 'MRPS35|p.G94Afs*10|1|0.43|ENSG00000061794|chr12:27716416-27716416|G/-|frameshift_variant'] 101888 14226 SLPRDLTI True PC9_epitope_Rep2 913.5232813840499 913.52218993586 59.987 2 -0.3736812918387219 0.1006412043490382 0.8417741210520496 ['ENST00000369815.5_1_10:105152218-105155557:-|nuORF', 'ENST00000369825.5_1_10:105154056-105155557:-|nuORF'] 41603 14741 IADLEEGEPAE True H1975_Epitope_Rep2 1171.52446315251 1171.52336993586 61.862 2 -0.3736842839139989 0.10065687453173731 0.841777422315534 ['nc|ENSG00000141298|Q76I76|SSH2', 'ENSG00000141298|ENST00000540801|SSH2'] 92258 8626 RLKRWEEFP True NCI_RA007_Epitope_Rep4 1259.6774906096698 1259.67583490379 39.964 3 -0.37374008214687054 0.10067254416837997 0.8418389830890891 ['ENST00000395900.1_1_11:32457375-32459526:+|nuORF'] 66167 10250 LSEQDWQAY True H1975_Epitope_Rep3 1138.4931034545798 1138.49200993586 44.475 2 -0.3737945118193532 0.10072130462053104 0.84189902771142 ['BNC2|p.P27Q|1|0.12|ENSG00000173068|chr9:16738409-16738409|G/T|missense_variant'] 98501 11014 SFLDSLLAT True H1975_Epitope_Rep3 965.50696261357 965.50586993586 47.455 2 -0.37383541257056363 0.10072130462053104 0.8419441436928891 ['ENSG00000215262|ENST00000399881|KCNU1'] 120335 11010 VEEDQDPSCP True PC9_epitope_Rep1 1117.42336921225 1117.4222699358602 47.238 2 -0.3739253340037717 0.10072468817504007 0.8420433200584714 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 102379 12207 SLTFMPETFPA True NCI_RA007_Epitope_Rep2 1239.5845613112701 1239.5834699358602 52.082 2 -0.37392857727436946 0.10072468817504007 0.8420468968155841 ['ENST00000283875.5_1_3:120500445-120500493:+|nuORF'] 24906 16829 FAYGYIEDL True H1975_Epitope_Rep3 1089.50187723313 1089.50137496793 70.285 1 -0.37393118698605393 0.10072468817504007 0.8420497748524781 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 24050 15528 EYNNNFHVL True PC9_epitope_Rep5 1148.5250722892001 1148.5239699358601 64.739 2 -0.3739415562621559 0.10072468817504007 0.8420612101339164 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 54139 17775 KVPEWVDTV True PC9_epitope_Rep3 1071.5600608155898 1071.5594749679299 73.572 1 -0.3739518271261792 0.10072468817504007 0.8420725366616739 ['ENSG00000105372|ENST00000598742|RPS19'] 33476 14249 GLATDVQTV True PC9_epitope_Rep3 902.47091145802 902.4703649679301 59.895 1 -0.37401849460087183 0.10072468817504007 0.8421460509351069 ['ENSG00000277791|ENST00000619426|PSMB3'] 90747 3491 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5876299358601 19.38 2 -0.3740680500179533 0.10072468817504007 0.8422006895994301 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 694 9128 AAVDAGMAM True NCI_RA007_Epitope_Rep3 835.35681030591 835.35570993586 42.992 2 -0.3740886146811373 0.10072468817504007 0.8422233621843295 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 113702 12980 TLYNMFSEDP True PC9_epitope_Rep1 1215.51179029383 1215.51068993586 54.799 2 -0.37421799732692207 0.1007908580984566 0.8423659859992555 ['nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B', 'ENST00000520794.1_1_5:179290450-179293075:-|nuORF'] 66312 20557 LSFSMYQSFV True PC9_epitope_Rep2 1207.55834656343 1207.55724993586 84.506 2 -0.3742302714960138 0.1007908580984566 0.8423795144467465 ['ENSG00000189077|ENST00000493111|TMEM120A', 'ENST00000465989.1_1_7:75616979-75617289:-|nuORF', 'ENST00000440632.5_1_7:75616492-75617528:-|nuORF', 'ENST00000417509.5_1_7:75616545-75617528:-|nuORF'] 124917 23474 VHRERRRKA True PC9_epitope_Rep2 1206.71700443622 1206.71590993586 95.763 2 -0.37423446936692195 0.10079774263220233 0.8423841412167958 ['ENSG00000215045|ENST00000457091|GRID2IP'] 121368 7891 VEVPAAAP True H1975_Epitope_Rep3 752.4068546494799 752.40630496793 35.328 1 -0.37428631772698273 0.10079774263220233 0.8424412838075697 ['KCNK10|p.A19E|1|0.41|ENSG00000100433|chr14:88263533-88263533|G/T|missense_variant'] 119857 11927 VDFEIKSL True PC9_epitope_Rep2 949.5120479940099 949.51094993586 51.2 2 -0.3743401281692146 0.10079774263220233 0.8425005826500014 ['ENSG00000188313|ENST00000342435|PLSCR1', 'nc|ENSG00000188313|O15162-2|PLSCR1', 'ENST00000478267.5_1_3:146234735-146251325:-|nuORF'] 17957 8693 EICVNNTP True PC9_epitope_Rep6 888.40111764604 888.40002993586 43.288 2 -0.3743421896459633 0.10079774263220233 0.8425028542617281 ['ENST00000336139.8_1_11:123597023-123597197:-|nuORF'] 7348 4246 ARPSPQVPA True PC9_epitope_Rep2 921.50321464581 921.50210993586 21.662 2 -0.37438017059285333 0.10079774263220233 0.8425447051049371 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 43551 13592 IGRFLPASP True PC9_epitope_Rep2 956.5443511817998 956.54324993586 57.571 2 -0.3743904974847146 0.10079774263220233 0.8425560836630751 ['ENSG00000146263|ENST00000683635|MMS22L'] 62679 19386 LLLLFFMIIFA True PC9_epitope_Rep6 1339.7977889831502 1339.79668993586 87.219 2 -0.37439502199958113 0.10081164872679138 0.8425610688702728 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 29230 20094 FTVEHSISV True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 84.084 2 -0.37439889550397565 0.10081164872679138 0.8425653367445807 ['WDPCP|p.V306I|1|0.13|ENSG00000143951|chr2:63404567-63404567|C/T|missense_variant'] 87409 5021 QPWRGGAGA True PC9_epitope_Rep3 898.4409487424198 898.43984993586 24.404 2 -0.3744023035107288 0.10082028596805935 0.8425690917007264 ['ENSG00000165684|ENST00000684778|SNAPC4'] 134924 16950 VYWGMLWFAF True PC9_epitope_Rep6 1318.6208872503396 1318.6197899358601 77.742 2 -0.37445947097947413 0.10082028596805935 0.8426320752570244 ['ENST00000418609.5_1_4:186508297-186508507:-|nuORF'] 86492 27555 QKVWKRWKKRY True PC9_epitope_Rep1 1604.9415846374395 1604.9399249037901 112.84 3 -0.3744595207438891 0.10082028596805935 0.8426321300812274 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 125390 5655 VISASLGTAQP True NCI_RA007_Epitope_Rep4 1042.56587447202 1042.56476993586 28.358 2 -0.3744620507350423 0.10082028596805935 0.8426349173015937 ['ENSG00000112624|ENST00000314073|BICRAL'] 22865 8740 EVDECHMDP True H1975_Epitope_Rep2 1073.3793962252898 1073.37828993586 38.58 2 -0.3744652019625383 0.10082028596805935 0.8426383889009225 ['ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'EML4-ALK|9|fusion', 'EML4-ALK|11|fusion', 'EML4-ALK|8|fusion', 'EML4-ALK|10|fusion'] 46234 4041 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 20.673 2 -0.37450859357130234 0.1008690200449313 0.8426861897229615 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 17221 9281 EGVVTKCKP True H1975_Epitope_Rep3 959.5110024481899 959.50990993586 40.693 2 -0.37451589888322995 0.1008690200449313 0.8426942369511612 ['nc|ENSG00000116106|P54764-2|EPHA4', 'ENSG00000116106|ENST00000281821|EPHA4'] 99607 19518 SIFETIYHGVP True PC9_epitope_Rep3 1261.63428838501 1261.6331899358602 80.308 2 -0.37457071135900516 0.10087765123811514 0.8427546123300558 ['ENSG00000174607|ENST00000310836|UGT8'] 122561 16175 VGFAFLGS True H1975_Epitope_Rep1 796.4119400299198 796.41139496793 67.563 1 -0.37459496447592394 0.10087765123811514 0.842781324762631 ['ENST00000557789.5_1_15:64446168-64446417:+|nuORF'] 14581 6344 DTWESLQK True NCI_RA007_Epitope_Rep5 1005.47672511445 1005.47562993586 31.077 2 -0.37462693403183717 0.10087765123811514 0.8428165340982263 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 37759 19728 GYADIVQLL True NCI_RA007_Epitope_Rep1 990.5385970950199 990.53750993586 80.924 2 -0.37464192050649847 0.10087765123811514 0.8428330385112859 ['ENSG00000134996|ENST00000346234|OSTF1'] 14555 15931 DTTAELAVSL True PC9_epitope_Rep1 1018.5182555732599 1018.51714993586 66.088 2 -0.3746901347692674 0.10087765123811514 0.8428861328607035 ['ENST00000493368.5_1_9:37422710-37428742:+|nuORF', 'ENSG00000137106|ENST00000318158|GRHPR', 'ENST00000460882.5_1_9:37422710-37436776:+|nuORF', 'ENST00000377824.8_1_9:37422741-37431094:+|nuORF'] 36825 6045 GVLGAVEG True NCI_RA007_Epitope_Rep4 700.3755545212 700.3750049679301 29.87 1 -0.3749733185853525 0.10101168399240802 0.8431978739359197 ['XKR6|p.G192V|1|0.24|ENSG00000171044|chr8:11200765-11200765|C/A|missense_variant'] 57027 10207 LDRRYNMEK True NCI_RA007_Epitope_Rep4 1223.6080907205098 1223.6064449037901 46.115 3 -0.37503759146150667 0.10101168399240802 0.8432686029331102 ['ENSG00000125633|ENST00000376300|CCDC93'] 113333 16906 TLRPGVTVI True PC9_epitope_Rep5 954.5862159937799 954.58510993586 70.043 2 -0.37505900531616887 0.10101168399240802 0.8432921656757011 ['ENST00000478953.1_1_10:99379422-99393256:-|nuORF'] 95333 20602 RVRRTRRGAAA True NCI_RA007_Epitope_Rep4 1268.7650172578 1268.76392993586 89.229 2 -0.37508486272898867 0.10104475013059376 0.8433206164838003 ['ENST00000460734.5_1_21:46494558-46536853:+|nuORF', 'ENST00000437626.5_1_21:46494558-46548358:+|nuORF'] 66776 11735 LSLQKEAMVKP True NCI_RA007_Epitope_Rep2 1242.7005941230198 1242.6994899358601 50.243 2 -0.3752594081678458 0.10109522731625777 0.8435126277065721 ['PDCL2|p.R36S|1|0.16|ENSG00000163440|chr4:55582138-55582138|G/T|missense_variant'] 111931 11402 TIPSAPQAV True PC9_epitope_Rep2 882.4810822188999 882.47998993586 49.18 2 -0.3753106242510723 0.10111087895250034 0.8435689552537852 ['ENSG00000133216|ENST00000374630|EPHB2', 'nc|ENSG00000133216|P29323-3|EPHB2', 'nc|ENSG00000133216|P29323|EPHB2'] 137842 21920 YESDFKPYLY True NCI_RA007_Epitope_Rep2 1323.60231955039 1323.6012299358601 90.887 2 -0.3754336998963065 0.10114218058989449 0.8437042889437946 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 31743 12940 GEGVGQVNI True PC9_epitope_Rep3 871.43994568291 871.4393949679301 54.797 1 -0.375434049607269 0.10114218058989449 0.8437046734343507 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259'] 19619 7127 ELQRDKVV True PC9_epitope_Rep6 985.5556441414898 985.55454993586 36.468 2 -0.3754728915523374 0.10115606936416185 0.843747376505775 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 60406 15389 LGTQPLPAQ True PC9_epitope_Rep3 923.5076313199099 923.50708496793 64.349 1 -0.3755505246015279 0.10115606936416185 0.8438327160437656 ['ENST00000471629.1_1_20:43353203-43355945:+|nuORF', 'ENSG00000064205|ENST00000190983|CCN5'] 70904 9739 LYEQGGRLK True NCI_RA007_Epitope_Rep1 1062.5821932425 1062.58108993586 41.884 2 -0.37562683311850836 0.10117171857861657 0.8439165855903702 ['UBN1|p.Q794Kfs*51|1|0.07|ENSG00000118900|chr16:4874784-4874784|G/-|frameshift_variant', 'nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1'] 80907 17418 PHYQVSIINI True PC9_epitope_Rep5 1182.6397081186199 1182.63805490379 71.999 3 -0.3757966610609329 0.10122218740206831 0.8441031908360089 ['ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 65036 7284 LQKEINSLSGK True NCI_RA007_Epitope_Rep2 1215.68230120659 1215.6812099358601 32.953 2 -0.3758172796802847 0.10125524469437142 0.8441258416340265 ['ENSG00000101997|ENST00000376227|CCDC22'] 60214 13995 LGPRLVLA True PC9_epitope_Rep6 837.5436229058099 837.54252993586 65.689 2 -0.37587279793954637 0.10130571030640668 0.8441868266679962 ['ENSG00000170348|ENST00000303575|TMED10'] 60113 10262 LGLTLGTMWLC True H1975_Epitope_Rep3 1206.61408761774 1206.61298993586 44.522 2 -0.3759730532072605 0.10131959193621393 0.8442969348653897 ['ENSG00000145626|ENST00000274278|UGT3A1'] 36926 20271 GVLQQQGGAP True PC9_epitope_Rep2 953.4930438849298 953.49194993586 83.394 2 -0.37599244529734127 0.10131959193621393 0.8443182299439828 ['nc|ENSG00000165495|Q96KN3-2|PKNOX2', 'PKNOX2|p.D397Mfs*25|1|0.64|ENSG00000165495|chr11:125430134-125430134|C/-|frameshift_variant', 'ENSG00000165495|ENST00000298282|PKNOX2', 'ENST00000526955.1_1_11:125281302-125301285:+|nuORF'] 6477 8597 APSLEQRK True PC9_epitope_Rep3 927.5137793295099 927.51268993586 38.018 2 -0.3760138196180971 0.10135264523092456 0.8443417007056745 ['ENST00000325748.8_1_2:179315776-179315911:-|nuORF'] 99894 13316 SILVMM[Oxidation]LSL True PC9_epitope_Rep3 1021.55517613973 1021.55406993586 56.254 2 -0.37604965046484734 0.10138393245713291 0.8443810434044602 ['ENST00000481463.5_1_3:195101781-195102681:-|nuORF'] 39522 18622 HLFSDLNKLK True PC9_epitope_Rep1 1213.68190728377 1213.68080993586 76.417 2 -0.3760651455052334 0.10138393245713291 0.8443980561661092 ['ENSG00000163781|ENST00000260810|TOPBP1'] 56053 8025 LASVRRVF True NCI_RA007_Epitope_Rep5 946.5712346359799 946.57012993586 37.558 2 -0.37613042878014774 0.10145003220359636 0.8444697273588698 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000542958.5_1_12:64816967-64819028:+|nuORF', 'ENST00000443317.1_1_20:32802260-32803361:-|nuORF'] 88405 13059 QSLYPLLKDP True H1975_Epitope_Rep2 1172.6441247927198 1172.64302993586 55.354 2 -0.37613824600462903 0.10145003220359636 0.8444783087866106 ['ENSG00000140835|ENST00000539698|CHST4'] 34432 6529 GPKEPGFEA True PC9_epitope_Rep2 930.4446967101799 930.44358993586 30.529 2 -0.3761875482957405 0.10149518720300778 0.8445324273262957 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 59399 5024 LFLLSSSAP True NCI_RA007_Epitope_Rep2 933.51713337445 933.51602993586 24.167 2 -0.3761907167823032 0.10149518720300778 0.8445359051301238 ['ENST00000392690.3_1_2:168725736-168725883:+|nuORF'] 136471 4410 WVLKRKKKLKK True NCI_RA007_Epitope_Rep1 1453.9973086084094 1453.9962099358602 21.267 2 -0.37622892453981377 0.10149518720300778 0.8445778408795472 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 96535 10146 SADTLWGIQK True H1975_Epitope_Rep1 1117.57677350889 1117.57566993586 43.965 2 -0.37623484565175 0.10149518720300778 0.8445843393986777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 59786 9160 LGEISALTSK True NCI_RA007_Epitope_Rep1 1017.57062549929 1017.56952993586 39.631 2 -0.3762804302687868 0.10150905957913425 0.8446343663488957 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 83344 20982 PTEPLTAEL True PC9_epitope_Rep1 969.5018772331299 969.50078993586 85.534 2 -0.3763011020361192 0.10150905957913425 0.8446570509204141 ['ENST00000441363.1_1_6:74009094-74009619:+|nuORF'] 84046 9088 PVVPESTGP True H1975_Epitope_Rep1 881.44944773745 881.44834993586 39.861 2 -0.37633835214140565 0.10152469801928499 0.8446979253574219 ['nc|ENSG00000073146|Q9BXT6-2|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-4|MOV10L1', 'ENSG00000073146|ENST00000262794|MOV10L1'] 93334 22363 RPVDIVFLL True PC9_epitope_Rep5 1070.64881625034 1070.6477099358601 91.029 2 -0.37634453289210024 0.10153326719922032 0.844704707141521 ['ENSG00000142173|ENST00000300527|COL6A2'] 121577 12146 VFEIDIKINY True H1975_Epitope_Rep3 1252.67033954056 1252.66924993586 51.887 2 -0.3763559715023703 0.10153326719922032 0.8447172578211813 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 22486 2711 ETFRLRFRQFR True NCI_RA007_Epitope_Rep2 1554.8531635558595 1554.85097987172 14.773 4 -0.3763751703011735 0.10153326719922032 0.8447383224013914 ['nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25', 'ENSG00000197037|ENST00000394152|ZSCAN25', 'ENST00000466948.1_1_7:99217289-99228306:+|nuORF', 'ENST00000481424.5_1_7:99217223-99217685:+|nuORF', 'nc|ENSG00000197037|Q6NSZ9-4|ZSCAN25'] 128029 6946 VPKGSVSI True H1975_Epitope_Rep2 785.46470387877 785.46360993586 31.637 2 -0.37639821710850174 0.10153326719922032 0.8447636077238101 ['ENTPD5-ALDH6A1|1|fusion', 'ENSG00000187097|ENST00000334696|ENTPD5'] 99426 9590 SIAAEWKMIEP True PC9_epitope_Rep2 1273.6376595132901 1273.63600490379 42.232 3 -0.3764101977663651 0.10153326719922032 0.8447767515236061 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 43373 13844 IGALLTGSLWY True H1975_Epitope_Rep1 1192.6492101731599 1192.64810993586 58.397 2 -0.3764892779925088 0.10158371040723982 0.8448635001641428 ['TGFBR3|p.A804S|1|0.07|ENSG00000069702|chr1:91695699-91695699|C/A|missense_variant'] 91234 14811 RGGGCGGGG True NCI_RA007_Epitope_Rep4 676.2711065359999 676.27055496793 64.432 1 -0.37657832798909724 0.10166365028539608 0.8449611663759043 ['ENST00000407595.2_1_2:56411641-56419673:+|nuORF'] 136955 10043 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.3808149679301 46.296 1 -0.3765919558180462 0.10166365028539608 0.8449761110136624 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 59054 8908 LEVTNNLEHKS True H1975_Epitope_Rep3 1282.6517293543 1282.65062993586 39.264 2 -0.376651654815098 0.10166365028539608 0.8450415729259142 ['ZBTB5|p.A642Vfs*11|1|0.39|ENSG00000168795|chr9:37440627-37440628|-/CTTA|frameshift_variant', 'ENSG00000168795|ENST00000307750|ZBTB5'] 62526 12065 LLIYKDRLRIN True PC9_epitope_Rep2 1415.8612686280696 1415.85961490379 51.721 3 -0.37668012437794807 0.10166365028539608 0.8450727875264178 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 14992 17175 DYIQLKSL True PC9_epitope_Rep5 978.53859709502 978.53750993586 71.086 2 -0.3767045461572477 0.10167397508178465 0.8450995623994847 ['nc|ENSG00000172987|Q8WWQ2-4|HPSE2', 'nc|ENSG00000172987|Q8WWQ2-3|HPSE2', 'nc|ENSG00000172987|Q8WWQ2-2|HPSE2', 'ENSG00000172987|ENST00000370552|HPSE2'] 106652 10384 STTGGLTSV True PC9_epitope_Rep1 821.41306222873 821.4125149679301 44.826 1 -0.37673063343074825 0.10167397508178465 0.8451281615485216 ['ENST00000474729.5_1_1:167734818-167757155:+|nuORF', 'nc|ENSG00000197965|O95297-2|MPZL1', 'ENSG00000197965|ENST00000359523|MPZL1', 'nc|ENSG00000197965|O95297-3|MPZL1', 'ENST00000465787.5_1_1:167691238-167742606:+|nuORF', 'nc|ENSG00000197965|O95297-5|MPZL1', 'ENST00000464954.1_1_1:167691199-167735064:+|nuORF'] 3063 12374 AFVGIKVNQ True PC9_epitope_Rep6 974.5549158654999 974.55380993586 59.001 2 -0.3767348233598069 0.10167397508178465 0.8451327547517956 ['ENSG00000164946|ENST00000380880|FREM1', 'ENST00000486223.1_1_9:14751839-14775864:-|nuORF', 'nc|ENSG00000164946|Q5H8C1-4|FREM1', 'nc|ENSG00000164946|Q5H8C1-2|FREM1'] 21750 7685 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep2 1133.4811592523297 1133.48006993586 34.929 2 -0.3767422168242338 0.10167397508178465 0.8451408597155667 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 31314 19534 GDLENAFLNL True NCI_RA007_Epitope_Rep1 1104.54513902744 1104.54457496793 80.148 1 -0.3768581206115273 0.10168783713241691 0.8452678988951378 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 54136 16677 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5594749679299 69.392 1 -0.376874434845024 0.10168783713241691 0.8452857777178616 ['ENSG00000105372|ENST00000598742|RPS19'] 4033 8496 AHFQDNLHS True PC9_epitope_Rep4 1067.47845644995 1067.47734993586 40.152 2 -0.37699891249541995 0.10175389755011136 0.8454221703831241 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'nc|ENSG00000160563|Q6P2C8-4|MED27'] 69797 11790 LVGGEKRL True PC9_epitope_Rep3 870.5287011176599 870.52760993586 50.367 2 -0.37700083673927864 0.10175389755011136 0.8454242784983623 ['ENST00000373425.7_1_9:129884890-129885061:-|nuORF'] 56006 7919 LASLHEAP True PC9_epitope_Rep2 836.43921740692 836.43812993586 35.826 2 -0.3772614764664823 0.10176244410807801 0.8457097336416542 ['ENST00000429604.5_1_19:53578422-53594911:-|nuORF', 'ENST00000596966.5_1_19:53589336-53594911:-|nuORF', 'ENST00000355147.9_2_19:53578422-53594911:-|nuORF', 'ENST00000597112.5_1_19:53589473-53594911:-|nuORF'] 141621 10662 YTSAKQELK True PC9_epitope_Rep1 1066.56587447202 1066.56476993586 45.902 2 -0.3772756795729193 0.10176244410807801 0.8457252838546737 ['SYNE2|p.E6174Q|1|0.24|ENSG00000054654|chr14:64209558-64209558|G/C|missense_variant'] 48066 23043 IYMDTLNIF True PC9_epitope_Rep2 1128.5525329069999 1128.55197496793 94.127 1 -0.3773229962749027 0.10176244410807801 0.8457770844742705 ['ENSG00000165678|ENST00000372134|GHITM'] 66041 20488 LSEGTILDL True PC9_epitope_Rep2 959.5175272972699 959.5169749679301 84.237 1 -0.3773280921070923 0.10176244410807801 0.8457826628513304 ['ENSG00000169594|ENST00000345382|BNC1'] 108409 18741 SYLNPVRTFP True PC9_epitope_Rep6 1192.62405805448 1192.62296993586 84.727 2 -0.37734686851737914 0.10176244410807801 0.8458032166766478 ['ENSG00000074771|ENST00000159060|NOX3'] 24131 23122 EYPFILDAF True PC9_epitope_Rep4 1113.5382627418498 1113.53767496793 97.158 1 -0.37740066346222817 0.10181286753192526 0.8458620987414418 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 33833 13137 GLNLLGKRKTR True NCI_RA007_Epitope_Rep4 1254.7884380409798 1254.7873499358602 57.63 2 -0.3774236658871138 0.10182495085332545 0.8458872740236184 ['nc|ENSG00000154889|Q53F39-4|MPPE1', 'ENSG00000154889|ENST00000588072|MPPE1'] 67102 14455 LSQIAIKDP True PC9_epitope_Rep1 983.5651461960299 983.56404993586 60.425 2 -0.37746681937075877 0.10182495085332545 0.8459345000488022 ['ENST00000553891.5_1_14:73491454-73491541:-|nuORF'] 5731 11316 APAPPVYEA True PC9_epitope_Rep4 913.4545331178899 913.45342993586 51.305 2 -0.3774717589231936 0.10182495085332545 0.8459399054452272 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P162Rfs*4|1|0.1|ENSG00000169375|chr15:75413034-75413035|GG/-|frameshift_variant', 'ENST00000568919.1_1_15:75722503-75722716:-|nuORF', 'SIN3A|p.P107Hfs*15|1|0.34|ENSG00000169375|chr15:75422693-75422693|G/-|frameshift_variant'] 71966 4250 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 21.464 2 -0.37756910331760973 0.1018562009637632 0.8460464169423709 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 81631 11324 PLLHTPMYFL True PC9_epitope_Rep2 1230.6471019981798 1230.64546490379 48.88 3 -0.3775810095510711 0.1018562009637632 0.8460594426648168 ['ENSG00000176198|ENST00000641082|OR11H4', 'nc|ENSG00000176198|Q8NGC9|OR11H4'] 46918 8143 ITNFMRTREE True NCI_RA007_Epitope_Rep4 1295.62922008791 1295.6275649037902 38.112 3 -0.3776336156150553 0.10186828097275859 0.8461169904904455 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 28770 13668 FSSTHFTP True PC9_epitope_Rep1 922.4184819623399 922.41738993586 57.428 2 -0.3776556861881859 0.10186828097275859 0.8461411321431938 ['ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 30691 15019 GALEPHINAQI True PC9_epitope_Rep1 1161.61422164677 1161.6131299358601 62.591 2 -0.3776629876673245 0.10186828097275859 0.8461491184982263 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 79900 19198 PEPKSQRDSAL True PC9_epitope_Rep6 1226.62551460646 1226.62387490379 86.498 3 -0.37770838001103235 0.10188213192318397 0.8461987654218638 ['ENSG00000163064|ENST00000295206|EN1'] 16763 10344 EETPEEWNLYY True H1975_Epitope_Rep2 1471.61434078607 1471.61324993586 44.796 2 -0.37770847369595806 0.10188213192318397 0.8461988678820777 ['ENSG00000130159|ENST00000270517|ECSIT', 'nc|ENSG00000130159|Q9BQ95-3|ECSIT'] 73704 9903 MYRRWWEQFVQ True PC9_epitope_Rep1 1627.77180200067 1627.7701649037901 42.949 3 -0.37778767152272236 0.10189598190989738 0.846285475607114 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 63878 18218 LNNAVSINL True PC9_epitope_Rep2 956.52909504048 956.52798993586 75.392 2 -0.37779544719006924 0.10189598190989738 0.8462939778748667 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.I755Sfs*38|1|0.15|ENSG00000121871|chr3:165188569-165188569|G/-|frameshift_variant'] 119329 19291 VANSLPELL True PC9_epitope_Rep4 954.53859709502 954.53750993586 82.308 2 -0.3778495495193008 0.1019116035553391 0.8463531313353696 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 91878 3780 RKKRKILARKK True PC9_epitope_Rep2 1423.9939545634695 1423.99284993586 19.804 2 -0.3779537227391735 0.10195846523115455 0.846467008356777 ['nc|ENSG00000168297|Q7Z7A4-5|PXK', 'nc|ENSG00000168297|Q7Z7A4-7|PXK', 'nc|ENSG00000168297|Q7Z7A4-2|PXK', 'nc|ENSG00000168297|Q7Z7A4-6|PXK', 'nc|ENSG00000168297|Q7Z7A4-4|PXK', 'ENSG00000168297|ENST00000356151|PXK', 'nc|ENSG00000168297|Q7Z7A4-3|PXK'] 28041 27587 FQRKRKSRRYY True PC9_epitope_Rep1 1586.8906116937399 1586.8889549037901 113.0 3 -0.3779613698189856 0.10195846523115455 0.8464753666222264 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 137925 4244 YFCRYCAWRVF True NCI_RA007_Epitope_Rep1 1512.67948183896 1512.6783899358602 20.62 2 -0.37796375614881556 0.10195846523115455 0.8464779748509335 ['ENSG00000163121|ENST00000451794|NEURL3'] 81446 20646 PLFLAEPAL True PC9_epitope_Rep5 969.5535188831699 969.55242993586 84.468 2 -0.3781239734845392 0.10200887033655101 0.8466530555326158 ['ENSG00000152822|ENST00000282753|GRM1', 'ENST00000507907.1_1_6:146747775-146755929:+|nuORF', 'ENST00000492807.6_1_6:146720717-146755929:+|nuORF'] 65632 15367 LSAFSEWTL True PC9_epitope_Rep5 1052.51786165044 1052.51676993586 64.119 2 -0.3781879303335413 0.10202093985877769 0.8467229264680491 ['RP1L1|p.R1622W|1|0.09|ENSG00000183638|chr8:10609234-10609234|G/A|missense_variant'] 76731 18835 NQVALPNI True PC9_epitope_Rep1 867.48141657207 867.48030993586 77.233 2 -0.3782025600128672 0.10202093985877769 0.8467389074150676 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 142430 18141 YYFDYKEQL True PC9_epitope_Rep4 1267.57610480255 1267.5750099358602 77.845 2 -0.37822315224767133 0.10202093985877769 0.8467614006777671 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 133583 18359 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 77.425 2 -0.37831182143022296 0.10205039912349351 0.8468582426386099 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 31491 5331 GEASPPAPP True NCI_RA007_Epitope_Rep4 821.3919328613299 821.39082993586 27.071 2 -0.37831803902769623 0.10205039912349351 0.846865032532879 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 107150 22135 SVIDVDHFFL True PC9_epitope_Rep2 1190.5971746003 1190.5960699358602 90.621 2 -0.37832662225897723 0.10205039912349351 0.8468744056351007 ['ENSG00000151881|ENST00000397080|TMEM267'] 73543 19981 MVPPDTYTL True PC9_epitope_Rep1 1035.4946836777099 1035.4935899358602 81.682 2 -0.3783558369072258 0.10208163052362486 0.8469063072817256 ['NPAP1|p.S804Y|1|0.21|ENSG00000185823|chr15:24678278-24678278|C/A|missense_variant'] 13129 21763 DLQVRRIHP True PC9_epitope_Rep2 1132.6465248345598 1132.6454299358602 89.181 2 -0.37836758043660323 0.10208163052362486 0.8469191302715114 ['ENST00000339626.5_1_13:41194051-41194435:+|nuORF'] 80682 19541 PGVKMIVV True PC9_epitope_Rep1 841.5095458962098 841.50844993586 79.987 2 -0.3783979162411751 0.10213024954351796 0.8469522528241726 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 57182 7278 LDVEPNC[Carbamidomethyl]RREG True H1975_Epitope_Rep3 1343.62519761606 1343.6241099358601 32.969 2 -0.3784115612846967 0.10213024954351796 0.8469671505445671 ['ENST00000503671.2_1_4:110736986-110737082:+|nuORF'] 116688 19841 TVCRRLSAW True PC9_epitope_Rep5 1090.5705830129798 1090.56948993586 81.366 2 -0.3784726181893929 0.10216147599422679 0.8470338066529857 ['ENST00000228741.7_1_12:96588285-96617411:+|nuORF'] 125876 20129 VLAPSLVVA True PC9_epitope_Rep2 867.5429541994699 867.54184993586 82.837 2 -0.3784819743905863 0.10216147599422679 0.8470440199810081 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3', 'ENST00000497918.5_1_2:220033318-220033813:-|nuORF', 'nc|ENSG00000213901|Q6PIS1-2|SLC23A3'] 85539 20030 QGCDIIPLAKL True PC9_epitope_Rep2 1169.6478302741698 1169.64619490379 82.449 3 -0.3785138797704946 0.10217708840509146 0.8470788464711572 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 64883 4764 LQEAYLWTK True NCI_RA007_Epitope_Rep2 1150.60225998074 1150.60116993586 23.161 2 -0.3785780838328494 0.10219270027300074 0.8471489205166959 ['DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE'] 80562 12826 PGPPWKPLMDP True H1975_Epitope_Rep2 1233.6216155263298 1233.6199649037899 54.444 3 -0.37867573531567944 0.10222569987828203 0.847255478861058 ['ENST00000463973.5_1_20:34206447-34206702:+|nuORF'] 78704 5450 PAAAAAAAPD True PC9_epitope_Rep3 824.4028318981999 824.40172993586 26.04 2 -0.37873345742176023 0.10227252968893989 0.8473184538611309 ['ENST00000246006.4_1_20:23066758-23066941:-|nuORF'] 120276 4983 VEDFDWCTPP True H1975_Epitope_Rep2 1207.4855755459898 1207.48446993586 24.25 2 -0.37874543670116917 0.10227252968893989 0.847331522177589 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'SMCHD1-NDC80|5|fusion'] 22547 6775 ETIEERDKRQQ True H1975_Epitope_Rep1 1430.71136948874 1430.70973490379 31.103 3 -0.37879867538732603 0.10227252968893989 0.8473895961591369 ['ENST00000461395.5_1_2:220378960-220396865:+|nuORF'] 94275 7733 RRRELWFWWRG True NCI_RA007_Epitope_Rep5 1646.8694823263397 1646.86783490379 36.445 3 -0.3788383734831029 0.10228813854018153 0.8474328948270904 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 6795 14586 AQELHTFEV True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 61.232 2 -0.37886342617770863 0.10230374684864818 0.8474602176067049 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 114127 11178 TPHFSGLAA True PC9_epitope_Rep2 899.4501164437899 899.44900993586 48.323 2 -0.3788847584063597 0.10233318265586425 0.8474834814789277 ['ENSG00000178952|ENST00000313511|TUFM'] 97819 16977 SELLCYFIII True PC9_epitope_Rep3 1212.6464332918401 1212.6453299358602 70.462 2 -0.37895562550273937 0.10233318265586425 0.8475607569026923 ['ENSG00000103335|ENST00000301015|PIEZO1'] 42033 15092 IDIEKQEKHIK True H1975_Epitope_Rep1 1379.7772642205898 1379.77616993586 63.305 2 -0.3789752665969772 0.10233318265586425 0.8475821717172229 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 31836 10851 GEISALTAEA True H1975_Epitope_Rep3 960.47639076128 960.47528993586 46.82 2 -0.3791152597255407 0.10240094577443976 0.8477347773254142 ['ENSG00000125968|ENST00000376112|ID1'] 102751 7337 SNAISRQS True PC9_epitope_Rep3 861.4304436283701 861.42934993586 33.232 2 -0.3791438390569801 0.10244954016793867 0.8477659250426365 ['ENST00000368653.7_1_10:129906207-129906252:-|nuORF'] 113320 17918 TLRLDVEAL True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 74.226 2 -0.37916665496344226 0.10244954016793867 0.8477907898194017 ['ENSG00000113262|ENST00000517717|GRM6'] 82343 6299 PPLATTSV True H1975_Epitope_Rep3 784.4330693973201 784.43196993586 29.234 2 -0.37925273503146373 0.10246514377107889 0.84788458738175 ['ENSG00000139629|ENST00000356317|GALNT6'] 110693 11965 TGDTIALNIIK True H1975_Epitope_Rep1 1157.66558851329 1157.66448993586 51.028 2 -0.37926092368324055 0.10248074683170211 0.8478935091562471 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 118377 5655 TYNQKHSLF True NCI_RA007_Epitope_Rep5 1136.5614577979202 1136.56036993586 28.44 2 -0.37927703118401607 0.10249634934983659 0.8479110582253826 ['MID1IP1|p.L161Hfs*9|1|0.41|ENSG00000165175|chrX:38805427-38805428|CT/-|frameshift_variant', 'ENSG00000165175|ENST00000614558|MID1IP1'] 61264 19015 LIPDIDLKL True PC9_epitope_Rep6 1038.63249747986 1038.6314099358601 85.785 2 -0.3792900185311283 0.10250838736593251 0.8479252073934849 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 12909 21122 DLKGTAAPTL True PC9_epitope_Rep1 985.5444107514498 985.54330993586 86.075 2 -0.3793137876015506 0.10250838736593251 0.8479511016304236 ['ENSG00000101825|ENST00000217939|MXRA5'] 104742 13941 SQVLLEENNYL True H1975_Epitope_Rep2 1320.6561460284 1320.65504993586 58.772 2 -0.3793235385443389 0.10250838736593251 0.847961723958503 ['ENSG00000204659|ENST00000376974|CBY3'] 137366 8575 YDRRFVKWMIK True NCI_RA007_Epitope_Rep1 1540.8336739812396 1540.8320249037902 37.357 3 -0.37944771142307226 0.10257613683771381 0.8480969712784711 ['ENST00000462722.5_1_9:131595865-131599118:-|nuORF', 'nc|ENSG00000286112|Q16773-2|KYAT1', 'ENSG00000171097|ENST00000302586|KYAT1'] 29709 11730 FVLTGFLHQPD True H1975_Epitope_Rep3 1272.65027280232 1272.64916993586 50.26 2 -0.37956955962006034 0.10262293372268863 0.8482296466342313 ['ENSG00000230301|ENST00000615035|OR5H6', 'nc|ENSG00000230301|Q8NGV6|OR5H6'] 8359 7828 ATLKDNEY True H1975_Epitope_Rep2 952.4501760134399 952.44906993586 35.059 2 -0.3795757209979775 0.10262293372268863 0.84823635444748 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 3032 8396 AFQGPREAD True PC9_epitope_Rep1 989.4566583762098 989.45556993586 37.132 2 -0.37958575921681936 0.10262293372268863 0.8482472827111511 ['ENSG00000206530|ENST00000393845|CFAP44'] 7786 5713 ASSRNLKKFI True NCI_RA007_Epitope_Rep3 1162.6822416369398 1162.68058490379 29.447 3 -0.3796520532470522 0.10263674760572193 0.8483194480007805 ['nc|ENSG00000136250|P28039-2|AOAH', 'ENSG00000136250|ENST00000617537|AOAH'] 27196 14333 FLLPRLDTSNE True PC9_epitope_Rep1 1303.67721582615 1303.67610993586 59.956 2 -0.37967270175854806 0.10263674760572193 0.8483419228340701 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 7455 13714 ASAMPNIT True PC9_epitope_Rep5 803.38473930591 803.3841949679301 57.779 1 -0.3797971042968316 0.10270448778113811 0.8484773045096108 ['ENSG00000132874|ENST00000255226|SLC14A2', 'nc|ENSG00000132874|Q15849-2|SLC14A2'] 88222 16973 QSCCALTGEGL True PC9_epitope_Rep1 1080.45798089916 1080.45688993586 70.11 2 -0.37985798903431783 0.10273746415225515 0.8485435476040606 ['ENSG00000165997|ENST00000377275|ARL5B'] 130131 4391 VSDSEPLK True NCI_RA007_Epitope_Rep3 873.4443623570099 873.44326993586 24.046 2 -0.3799696839572783 0.10280520022246942 0.8486650469380876 ['MPL|p.A32V|1|0.09|ENSG00000117400|chr1:43338114-43338114|C/T|missense_variant'] 28614 10040 FSHKNWLVF True NCI_RA007_Epitope_Rep4 1176.60801406752 1176.60637490379 45.461 3 -0.38003630422572415 0.1029076941793976 0.8487374992232233 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 130689 17604 VSTRWEIIAE True PC9_epitope_Rep6 1202.6295373577398 1202.62844993586 80.355 2 -0.38009917251973735 0.10292149672396114 0.8488058602502885 ['ENSG00000178913|ENST00000313368|TAF7'] 57154 8695 LDTQHMGI True PC9_epitope_Rep1 913.43275212749 913.43164993586 38.285 2 -0.3801003792036756 0.10292149672396114 0.8488071722580027 ['nc|ENSG00000123178|Q5W111-2|SPRYD7'] 15420 5519 EAKQMIAV True NCI_RA007_Epitope_Rep4 888.4738886634798 888.47278993586 27.823 2 -0.3802135368494232 0.10293708724365659 0.8489301895025821 ['ENST00000494748.1_1_1:1152894-1154464:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-2|SDF4', 'ENST00000478938.1_1_1:1152894-1154464:-|nuORF', 'ENSG00000078808|ENST00000360001|SDF4', 'nc|ENSG00000078808|Q9BRK5|SDF4', 'ENST00000465727.5_1_1:1152894-1153089:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-5|SDF4'] 15633 8050 EASQELLAQ True H1975_Epitope_Rep2 987.4872897981497 987.48618993586 35.913 2 -0.3802418346226684 0.10294730988461004 0.8489609475805828 ['ENSG00000182179|ENST00000333486|UBA7'] 15870 11754 EDGSFSFYSL True PC9_epitope_Rep5 1150.4818700645399 1150.48076993586 50.21 2 -0.38026152055371054 0.10294730988461004 0.8489823438174429 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|2|intron', 'ENSG00000185164.14,NOMO2,chr16,-,I25.1,18516011,18517188|112|33.48|3|intron'] 122297 20147 VGAVTLGVL True PC9_epitope_Rep4 827.5116540711899 827.51110496793 85.632 1 -0.38027117429513413 0.10294730988461004 0.8489928358954576 ['ENSG00000214511|ENST00000695931|HIGD1C'] 38843 6463 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 29.886 2 -0.3802763640207325 0.10294730988461004 0.8489984761974602 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 93209 4498 RPPPPPPPP True PC9_epitope_Rep6 950.5337864980999 950.53268993586 24.506 2 -0.3803397104113429 0.1029628986010948 0.8490673166037421 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 541 6711 AAPSRCYLR True NCI_RA007_Epitope_Rep3 1035.52838384783 1035.5272899358602 33.483 2 -0.38050826357739864 0.10299586417822264 0.8492504363870573 ['ENST00000519994.5_1_14:91633683-91655281:+|nuORF'] 104431 7409 SQLHRQWSP True H1975_Epitope_Rep2 1137.56794016069 1137.56684993586 33.441 2 -0.38052150586824895 0.10299892275080794 0.8492648198974593 ['ENST00000396191.5_1_7:32109982-32110375:-|nuORF'] 134920 11978 VYWDSAGAAHF True NCI_RA007_Epitope_Rep3 1222.5407223533396 1222.5396299358601 54.235 2 -0.38058978255066134 0.10299892275080794 0.8493389732644547 ['ENSG00000136213|ENST00000618655|CHST12'] 79738 6757 PDYKYQPRRRK True H1975_Epitope_Rep1 1505.82152907441 1505.81989490379 31.03 3 -0.3807130569004601 0.10299892275080794 0.8494728266725664 ['ENSG00000125398|ENST00000245479|SOX9', 'nc|ENSG00000100146|P56693-2|SOX10', 'ENST00000566034.1_1_16:1033566-1035383:+|nuORF', 'ENSG00000005513|ENST00000293894|SOX8', 'nc|ENSG00000100146|P56693|SOX10', 'ENSG00000100146|ENST00000396884|SOX10'] 55157 9821 LAALCQFGLLP True PC9_epitope_Rep1 1144.63145193404 1144.63034993586 42.638 2 -0.3807228333638272 0.10299892275080794 0.8494834403971453 ['ENSG00000145248|ENST00000273861|SLC10A4'] 62758 15243 LLLQDSAV True PC9_epitope_Rep4 857.4858332461699 857.48472993586 66.561 2 -0.38077109212297944 0.10299892275080794 0.8495358283419274 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 31278 16908 GDGPIC[Carbamidomethyl]LVL True H1975_Epitope_Rep1 942.4844536266099 942.48390496793 70.449 1 -0.38079161166643555 0.10299892275080794 0.8495581017344839 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 20991 8599 EQRERENEAK True NCI_RA007_Epitope_Rep1 1287.61674082791 1287.6156499358601 37.449 2 -0.3808235609129533 0.10299892275080794 0.8495927795258178 ['nc|ENSG00000147439|Q9NQY0-2|BIN3', 'ENSG00000147439|ENST00000276416|BIN3'] 1885 4948 AEIEHKVIEA True H1975_Epitope_Rep3 1137.60298825673 1137.60133490379 24.16 3 -0.38086473926379216 0.10299892275080794 0.8496374706127235 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 112393 18230 TLATRRSL True PC9_epitope_Rep3 916.54541381096 916.54430993586 75.334 2 -0.380950330197935 0.103014507862045 0.8497303485162602 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 26622 18803 FIMLIFLGL True PC9_epitope_Rep1 1065.62966102889 1065.62856993586 77.114 2 -0.38103478112240785 0.10304567645985718 0.8498219702984603 ['ENSG00000111181|ENST00000684302|SLC6A12'] 54359 12283 KYELDFSHF True NCI_RA007_Epitope_Rep4 1184.55022440788 1184.54857490379 54.245 3 -0.38105959816431756 0.10304567645985718 0.8498488909960714 ['ENSG00000137462|ENST00000642700|TLR2'] 23050 17564 EVHKWNLV True PC9_epitope_Rep3 1023.5501648382299 1023.5490699358601 72.746 2 -0.3811437015105058 0.10306125994648876 0.8499401113446702 ['ENSG00000203697|ENST00000366872|CAPN8'] 100077 12990 SIRVNRLL True PC9_epitope_Rep5 969.6083484206899 969.60724993586 54.975 2 -0.38126851342292356 0.10312179698764831 0.8500754505268194 ['CFAP47|p.A699V|1|0.12|ENSG00000165164|chrX:35971711-35971711|C/T|missense_variant'] 106097 3435 STCYSLCRRP True NCI_RA007_Epitope_Rep2 1184.5430479357997 1184.54140490379 18.018 3 -0.3812886800057135 0.10312179698764831 0.8500973141853296 ['ENST00000424185.6_2_13:111291157-111291343:+|nuORF'] 58188 6828 LELCFIFKEER True NCI_RA007_Epitope_Rep1 1425.7326225272898 1425.7309649037902 30.566 3 -0.38129866366531323 0.10312179698764831 0.8501081375994836 ['ENST00000433510.2_1_17:46713503-46713704:-|nuORF'] 88883 6703 QVEAGAER True H1975_Epitope_Rep3 858.4195445914999 858.4184499358599 30.737 2 -0.38136508052101376 0.10312179698764831 0.8501801342438972 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 67144 9789 LSQRFTFSP True H1975_Epitope_Rep1 1081.55564414149 1081.5545499358602 42.581 2 -0.3814119458611252 0.10312179698764831 0.8502309297820909 ['nc|ENSG00000082175|P06401-4|PGR', 'nc|ENSG00000082175|P06401-3|PGR', 'nc|ENSG00000082175|P06401-2|PGR', 'PGR|p.P906Qfs*3|1|0.18|ENSG00000082175|chr11:101039201-101039201|G/-|frameshift_variant', 'ENSG00000082175|ENST00000325455|PGR'] 128081 11554 VPLC[Carbamidomethyl]ILYEK True H1975_Epitope_Rep3 1133.61546779616 1133.6143699358602 49.57 2 -0.38147724942263733 0.10315474949621291 0.8503017000929157 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 113176 11883 TLPSLESLE True PC9_epitope_Rep1 987.51244191683 987.51134993586 50.574 2 -0.38150482407897807 0.10316853698363618 0.8503315797101864 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 82573 11735 PPVPLPAPS True PC9_epitope_Rep4 873.49600400705 873.49490993586 52.899 2 -0.381522592820576 0.10316853698363618 0.8503508326706419 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 12426 4292 DIVEC[Carbamidomethyl]LAEHG True NCI_RA007_Epitope_Rep2 1141.5073738991598 1141.50626993586 21.333 2 -0.3815886977286663 0.10323443579766536 0.8504224519625132 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1', 'DAPK1|p.V1032Cfs*64|1|0.19|ENSG00000196730|chr9:87706165-87706165|G/-|frameshift_variant', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000495281.1_1_9:90263689-90265069:+|nuORF', 'nc|ENSG00000196730|P53355-2|DAPK1'] 69096 11036 LTRDSNIIR True PC9_epitope_Rep3 1086.61455599994 1086.6134499358602 47.443 2 -0.3815931303488643 0.10323443579766536 0.8504272539319104 ['ENSG00000164654|ENST00000340080|MIOS', 'nc|ENSG00000164654|Q9NXC5-2|MIOS'] 39929 12162 HPHKIIVMY True NCI_RA007_Epitope_Rep4 1136.6164705762399 1136.6153699358601 53.779 2 -0.3816637856895766 0.10326738348764092 0.8505037896212497 ['ENSG00000163660|ENST00000295926|CCNL1', 'nc|ENSG00000163660|Q9UK58-6|CCNL1', 'ENST00000476367.5_1_3:156867074-156874849:-|nuORF', 'nc|ENSG00000163660|Q9UK58-4|CCNL1', 'ENST00000473872.5_1_1:1328774-1333626:-|nuORF', 'ENST00000482621.5_1_1:1328164-1330914:-|nuORF', 'ENST00000471930.5_1_1:1328164-1333737:-|nuORF', 'ENST00000478454.5_1_3:156869964-156874795:-|nuORF', 'ENST00000475298.5_1_3:156869697-156874849:-|nuORF', 'ENST00000479596.5_1_3:156869964-156874849:-|nuORF', 'nc|ENSG00000221978|Q96S94-5|CCNL2', 'nc|ENSG00000221978|Q96S94-2|CCNL2', 'nc|ENSG00000221978|Q96S94-4|CCNL2', 'ENSG00000221978|ENST00000400809|CCNL2'] 55670 6468 LALDREPPP True H1975_Epitope_Rep3 1006.5447451046199 1006.54364993586 29.851 2 -0.3817426373594775 0.10328295987493487 0.8505891881772782 ['nc|ENSG00000166359|Q6ZMY6-2|WDR88', 'ENSG00000166359|ENST00000355868|WDR88'] 71969 4537 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 22.573 2 -0.38181469367572934 0.1032949472843173 0.850667212781939 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 12489 20037 DKEFLPILQEE True PC9_epitope_Rep4 1359.69219718395 1359.6911099358601 85.21 2 -0.3818184600050817 0.1032949472843173 0.8506712906912692 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF'] 62177 10734 LLENKPIQL True H1975_Epitope_Rep3 1066.6386454894598 1066.63754993586 46.367 2 -0.3818414046526211 0.1032949472843173 0.8506961326869601 ['IGSF3|p.V692L|1|0.08|ENSG00000143061|chr1:116589060-116589060|C/A|missense_variant'] 127976 11039 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 47.449 2 -0.381875158148755 0.1033434650455927 0.8507326748084842 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 98801 7807 SGLPAAVAGT True PC9_epitope_Rep6 842.44978209062 842.44868993586 39.42 2 -0.38189543344282495 0.1033434650455927 0.8507546237447199 ['ENST00000423520.5_1_2:110371437-110371494:-|nuORF'] 63791 7961 LNFNRQQP True PC9_epitope_Rep2 1015.5199273391099 1015.51882993586 35.985 2 -0.3819180376118256 0.103359038488259 0.8507790925125244 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 1328 14976 AEDTISILP True H1975_Epitope_Rep3 957.5018772331299 957.50132496793 62.992 1 -0.38200837558416073 0.10339197943623321 0.8508768688902574 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 141919 6192 YVEVERRSV True H1975_Epitope_Rep2 1135.5985715826298 1135.59691490379 28.789 3 -0.38206579061167584 0.1034075514953628 0.8509390002357401 ['nc|ENSG00000120156|Q02763-3|TEK', 'nc|ENSG00000120156|Q02763-2|TEK', 'ENSG00000120156|ENST00000380036|TEK'] 4013 14596 AHETLHQSL True PC9_epitope_Rep5 1034.5145076055 1034.5134099358602 61.145 2 -0.38209596236380144 0.10341773470876316 0.8509716469309611 ['nc|ENSG00000164045|P30304-2|CDC25A', 'ENSG00000164045|ENST00000302506|CDC25A'] 32713 13577 GGTTLVITGN True PC9_epitope_Rep4 931.4974605590301 931.49691496793 60.117 1 -0.38210983085420613 0.10341773470876316 0.8509866522249879 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 89923 24737 RCRRRRRRRRL True H1975_Epitope_Rep1 1639.0138126579398 1639.01215490379 102.47 3 -0.38224650477786526 0.10341773470876316 0.8511345021426655 ['ENST00000550735.6_1_12:112280040-112280175:+|nuORF'] 61431 20641 LIVTGPLVLI True PC9_epitope_Rep4 1036.68961843316 1036.68852993586 87.552 2 -0.38227906419977525 0.10341773470876316 0.8511697167049999 ['ENST00000466502.1_1_3:142300490-142300658:+|nuORF'] 66192 12706 LSERSTIDL True PC9_epitope_Rep4 1032.54513902744 1032.5440499358601 56.729 2 -0.3823939865897817 0.10344707823217852 0.8512939883352554 ['SCN11A|p.C994R|1|0.42|ENSG00000168356|chr3:38885372-38885372|A/G|missense_variant'] 7818 4818 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 23.623 2 -0.38243108300532125 0.10344707823217852 0.8513340951917128 ['ENSG00000100403|ENST00000352645|ZC3H7B', 'ZC3H7B|p.S399Rfs*90|1|0.1|ENSG00000100403|chr22:41341139-41341139|C/-|frameshift_variant'] 110145 4176 TENNDADY True H1975_Epitope_Rep2 940.3410194872799 940.33992993586 21.17 2 -0.382464278387961 0.10344707823217852 0.851369981357239 ['ENSG00000114638|ENST00000264234|UPK1B'] 24469 15464 FAEAEEMRARL True PC9_epitope_Rep6 1321.6448701520499 1321.64376993586 71.647 2 -0.38257698129788353 0.103459053969577 0.8514917981307764 ['nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 90746 3634 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5870849037901 20.053 3 -0.38257731889424124 0.103459053969577 0.8514921629768993 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 75247 10611 NIEEDIRNGLK True NCI_RA007_Epitope_Rep1 1299.67827845531 1299.67718993586 45.263 2 -0.3825945183196831 0.103459053969577 0.8515107502901338 ['ACTN2|p.F66I|1|0.45|ENSG00000077522|chr1:236717927-236717927|T/A|missense_variant'] 124611 20194 VGVYALDSI True PC9_epitope_Rep5 935.4963979298699 935.49530993586 82.722 2 -0.38263112709850566 0.10347462188959697 0.8515503105714878 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 26736 19698 FKARRDWFRRL True PC9_epitope_Rep1 1549.8742333536097 1549.87258490379 80.594 3 -0.38279437153615037 0.1035231199319338 0.8517266731716189 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|34|2|sense'] 46980 7834 ITQDQVQEK True H1975_Epitope_Rep1 1087.5509526838698 1087.54984993586 35.086 2 -0.38280719333527696 0.1035231199319338 0.8517405223388637 ['MAGEB4|p.L249Q|1|0.2|ENSG00000120289|chrX:30242881-30242881|T/A|missense_variant'] 22120 17676 ESQRVVLQL True PC9_epitope_Rep3 1070.6084079903399 1070.60730993586 73.186 2 -0.38283429374353073 0.10353509046081188 0.8517697927852738 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'nc|ENSG00000127946|O00291-4|HIP1'] 132367 5401 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 28.663 2 -0.3828351195833103 0.10353509046081188 0.8517706847229234 ['ENSG00000160161|ENST00000291495|CILP2'] 45830 14804 ISDHYPVEV True PC9_epitope_Rep2 1057.50802524273 1057.5069299358602 62.208 2 -0.3828635448063094 0.10353509046081188 0.8518013839231359 ['ENSG00000013563|ENST00000369807|DNASE1L1', 'ENSG00000213918|ENST00000246949|DNASE1'] 94324 2663 RRRKRKKRK True NCI_RA007_Epitope_Rep3 1310.8959718576996 1310.89432490379 14.949 3 -0.38292387350449314 0.10358178377346042 0.851866531767959 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 17636 8621 EHISLITLDS True H1975_Epitope_Rep3 1126.58700383942 1126.5859099358602 38.154 2 -0.3829240554103546 0.10358178377346042 0.8518667281902145 ['CYP4F11|p.M198I|1|0.21|ENSG00000171903|chr19:15924814-15924814|C/A|missense_variant'] 33963 11025 GLSPLQRHRL True H1975_Epitope_Rep3 1175.68872399971 1175.68762993586 47.497 2 -0.382929711882572 0.10358178377346042 0.8518728360148822 ['ENST00000476344.1_1_1:149871204-149872023:+|nuORF', 'ENSG00000178096|ENST00000369152|BOLA1'] 63888 16660 LNNIADGL True PC9_epitope_Rep2 828.4341320264799 828.43302993586 69.326 2 -0.3829425121542597 0.10359734713010868 0.8518866573596542 ['ENSG00000165424|ENST00000372336|ZCCHC24', 'ENST00000372333.3_1_10:81146103-81203947:-|nuORF'] 56641 14293 LDIIFTWYFNG True H1975_Epitope_Rep3 1387.68123857743 1387.68014993586 60.321 2 -0.3831252861265052 0.10369971700897584 0.8520839640122273 ['ENSG00000113805|ENST00000263665|CNTN3'] 127980 11176 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48561496793 47.977 1 -0.3831603457528789 0.10373083800628462 0.8521218012234048 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 41709 10819 IAKGNNVL True PC9_epitope_Rep2 827.4865019525099 827.48540993586 46.934 2 -0.3831867628361229 0.10373083800628462 0.8521503090490832 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant'] 59299 11163 LFGWIIGV True PC9_epitope_Rep1 903.5218248320699 903.52072993586 47.824 2 -0.3832281161520171 0.10374459663559189 0.852194931521133 ['ENSG00000261115|ENST00000565468|TMEM178B'] 103569 10279 SPSPAFQF True H1975_Epitope_Rep2 879.41266830591 879.41156993586 44.544 2 -0.38324136980251294 0.10374459663559189 0.852209231975622 ['ENST00000533277.5_1_11:66612933-66613146:+|nuORF'] 140692 23909 YRWPMRYDQWW True NCI_RA007_Epitope_Rep2 1685.7561519365297 1685.7550499358601 100.37 2 -0.38325960011690363 0.10377571391372277 0.8522289014062001 ['nc|ENSG00000126107|Q5T447-2|HECTD3', 'ENSG00000126107|ENST00000372172|HECTD3'] 73809 19119 NAINITSAL True PC9_epitope_Rep4 915.50254593947 915.50144993586 81.635 2 -0.3833073642033195 0.10377571391372277 0.8522804318764733 ['ENSG00000127990|ENST00000648936|SGCE', 'nc|ENSG00000127990|O43556-3|SGCE', 'nc|ENSG00000127990|O43556-4|SGCE'] 89924 23340 RCRRRRRRRRL True PC9_epitope_Rep6 1639.0138126579398 1639.01215490379 102.88 3 -0.383339283296167 0.10380863104537721 0.8523148645633306 ['ENST00000550735.6_1_12:112280040-112280175:+|nuORF'] 117390 11203 TVPLTFATP True PC9_epitope_Rep1 945.5171333744499 945.51602993586 47.974 2 -0.38336913009766777 0.10382238577975281 0.8523470593399004 ['nc|ENSG00000165837|Q5W0A0-2|ERICH6B', 'ENSG00000165837|ENST00000298738|ERICH6B'] 117615 15503 TVTEITLI True PC9_epitope_Rep1 888.5167990212799 888.51570993586 64.455 2 -0.3833709325528723 0.10382238577975281 0.8523490035147238 ['ENSG00000196099|ENST00000309154|OR6M1', 'OR6M1|p.S5G|1|0.06|ENSG00000196099|chr11:123806337-123806337|T/C|missense_variant'] 121221 6119 VESVRTPYDL True PC9_epitope_Rep1 1177.59790287629 1177.5962549037902 28.351 3 -0.3834168684441773 0.10383613955910433 0.8523985482676882 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 123123 16971 VGKLWFVL True PC9_epitope_Rep6 960.5796740613598 960.57856993586 77.824 2 -0.3834171104505587 0.10383613955910433 0.8523988092721012 ['ENSG00000177291|ENST00000321660|GJD4'] 47433 21571 IVLQTLAPSP True PC9_epitope_Rep1 1037.6120963884498 1037.61098993586 87.793 2 -0.38353474255422204 0.10386905278505841 0.8525256574968484 ['ENST00000511482.1_1_5:306832-313953:+|nuORF'] 617 5717 AASDAVLS True NCI_RA007_Epitope_Rep5 732.36538376032 732.36483496793 28.678 1 -0.3835861641153186 0.10391030425048163 0.8525810963384359 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 33076 10850 GINEQQTL True PC9_epitope_Rep3 901.45051036661 901.44940993586 46.709 2 -0.3835921053209574 0.10391030425048163 0.8525875012488469 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B', 'nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A', 'ENST00000467042.1_1_2:99182504-99185377:+|nuORF'] 68284 6635 LTEEPDTNQNP True NCI_RA007_Epitope_Rep1 1256.5520748826798 1256.5509699358602 29.822 2 -0.38359342431647986 0.10391030425048163 0.8525889231779614 ['GFOD2|p.L376P|1|0.6|ENSG00000141098|chr16:67675186-67675186|A/G|missense_variant'] 12810 10914 DLFPYEESK True H1975_Epitope_Rep1 1126.51825557326 1126.51714993586 46.943 2 -0.3835959950028079 0.10391030425048163 0.8525916944658953 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 52680 16402 KLVILEGELER True PC9_epitope_Rep3 1297.7605515272899 1297.7589149037901 68.229 3 -0.3835970042084208 0.10391030425048163 0.8525927824193668 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 19984 8188 ELWMHTDP True H1975_Epitope_Rep1 1027.4433168111898 1027.44220993586 36.435 2 -0.3836306366204905 0.10391030425048163 0.8526290376200524 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 126455 22251 VLLCGCPV True H1975_Epitope_Rep3 802.40811760278 802.40700993586 93.053 2 -0.38366309482856387 0.10392405282979572 0.8526640242246731 ['ENST00000378536.4_1_1:2240087-2240159:+|nuORF'] 13740 11626 DQARTLPEL True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 49.597 2 -0.38369769307949947 0.10392405282979572 0.8527013145222728 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3'] 9145 17464 AVLDELKNMKC True PC9_epitope_Rep5 1262.6362796142998 1262.63464490379 72.175 3 -0.3838067585142279 0.103956959389101 0.8528188455886223 ['ENSG00000055163|ENST00000620254|CYFIP2', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENST00000518511.1_1_5:156727833-156729928:+|nuORF', 'ENSG00000273749|ENST00000617928|CYFIP1'] 53516 19569 KRKSDAVEM True PC9_epitope_Rep3 1062.54917886206 1062.5480899358602 80.507 2 -0.38397666335080904 0.10397251002238767 0.8530018760600124 ['ENSG00000186918|ENST00000344423|ZNF395'] 47028 5793 ITRENLEA True NCI_RA007_Epitope_Rep3 944.4927095317598 944.49160993586 29.764 2 -0.38404082808768486 0.10398806011592794 0.8530709779613906 ['ENSG00000125901|ENST00000380325|MRPS26'] 107067 9498 SVGREVCI True PC9_epitope_Rep1 861.4378375079299 861.43674993586 41.39 2 -0.38407208696341893 0.104 0.8531046381356586 ['ENST00000251691.4_1_6:138483291-138531090:+|nuORF'] 130800 5512 VTALSREQFFK True NCI_RA007_Epitope_Rep5 1324.7139356880396 1324.71229490379 27.89 3 -0.38407838549742984 0.104 0.853111420210635 ['ENST00000460321.5_1_3:118935188-118955715:-|nuORF', 'ENSG00000121578|ENST00000393765|B4GALT4'] 125329 13472 VIPISHFIP True H1975_Epitope_Rep2 1021.59605240149 1021.59494993586 56.954 2 -0.38413387570299035 0.104 0.8531711659196151 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 63936 9180 LNSEHEDV True PC9_epitope_Rep1 941.4090394774499 941.40794993586 40.161 2 -0.3843389328899364 0.10401554853711867 0.8533918787420884 ['ENSG00000196911|ENST00000368564|KPNA5'] 82425 4325 PPPHPPPPP True H1975_Epitope_Rep2 931.4915873329498 931.49048993586 21.751 2 -0.38440312288579936 0.10403109653461051 0.8534609468717672 ['nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF'] 45898 20627 ISDVVNYFLSV True PC9_epitope_Rep2 1254.64960409598 1254.6485099358601 84.775 2 -0.3844912864224881 0.10403942254303165 0.8535557928688309 ['ENST00000368468.3_1_6:119499937-119500069:-|nuORF'] 61253 20065 LINRPILVL True PC9_epitope_Rep4 1049.6961007959299 1049.69500993586 85.316 2 -0.3844994284142688 0.10403942254303165 0.8535645509690379 ['ENSG00000186765|ENST00000417245|FSCN2', 'nc|ENSG00000186765|O14926-2|FSCN2'] 55990 8248 LASGKLVE True PC9_epitope_Rep1 815.47526856247 815.47416993586 36.56 2 -0.38450877640848874 0.10403942254303165 0.8535746061171673 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000297151.8_1_5:159835702-159839515:-|nuORF'] 80333 7123 PGGGGSLPAG True PC9_epitope_Rep6 768.37661715036 768.37552993586 36.451 2 -0.38450933477104887 0.10403942254303165 0.8535752067113341 ['ENST00000331457.8_1_22:31795578-31795629:+|nuORF'] 61205 19038 LILKPVTSP True PC9_epitope_Rep3 966.61136811246 966.61026993586 78.451 2 -0.384515132172239 0.10403942254303165 0.8535814425493901 ['ENSG00000154175|ENST00000471714|ABI3BP'] 44270 7840 ILASWRCWWRR True PC9_epitope_Rep3 1531.79829153203 1531.79609987172 35.145 4 -0.38467557889722576 0.10410702201863516 0.8537539885287547 ['chr20:33103014-33104810|184|49.69|0.73|6.09|+|1|BPIFB4,BPIFB4|1'] 58988 23074 LEVEQVIPL True PC9_epitope_Rep5 1038.5961119711396 1038.5950099358602 93.739 2 -0.3846873369479673 0.10412075995488852 0.8537666306153707 ['ENST00000487257.1_2_3:57545269-57545728:+|nuORF', 'ENSG00000174840|ENST00000311180|PDE12'] 70720 24088 LWRKFARLAC True PC9_epitope_Rep4 1262.70701691614 1262.70647496793 101.16 1 -0.38469953249010913 0.10412075995488852 0.8537797427064506 ['ENSG00000188869|ENST00000359440|TMC3', 'nc|ENSG00000188869|Q7Z5M5-2|TMC3', 'ENST00000559982.1_1_15:81630174-81666445:-|nuORF'] 86789 19190 QLMINPFQL True PC9_epitope_Rep3 1102.58450174162 1102.5834099358601 79.032 2 -0.38480301935317185 0.10413630369907696 0.8538909915036189 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant', 'nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 111843 9439 TIMERFQMELK True NCI_RA007_Epitope_Rep1 1424.7155925641598 1424.71393490379 40.71 3 -0.38484883883671933 0.10415184690389853 0.8539402387492118 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant'] 42397 9841 IEDGGRYRDI True H1975_Epitope_Rep1 1192.58364979448 1192.58254993586 42.784 2 -0.38489518650052124 0.10416377515614157 0.8539900481461742 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 44619 23735 ILRLDLAWRDL True H1975_Epitope_Rep1 1382.8034193987799 1382.8023299358601 98.538 2 -0.3849043173277673 0.10416377515614157 0.8539998603031992 ['ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 15429 9919 EALATLPSSP True H1975_Epitope_Rep3 984.51277627 984.51166993586 43.185 2 -0.38490572120284483 0.10416377515614157 0.8540013689143339 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 31125 9509 GAVQAEYLQL True NCI_RA007_Epitope_Rep4 1090.56587447202 1090.56476993586 43.428 2 -0.3849451556765504 0.10417931680574591 0.8540437433086819 ['ENST00000318430.9_1_17:76133438-76134232:+|nuORF'] 79108 6588 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 30.146 2 -0.3849596132784224 0.10419485791610285 0.8540592777448857 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 136156 19987 WRRKEMKKFWK True H1975_Epitope_Rep1 1621.9027566005695 1621.9016499358602 83.188 2 -0.38498167638208536 0.10420859065991257 0.8540829831140635 ['ENSG00000138600|ENST00000261854|SPPL2A'] 37378 19267 GVSLPRRAPF True PC9_epitope_Rep5 1098.62981214126 1098.6287099358601 79.154 2 -0.38498572668496267 0.10420859065991257 0.8540873347639963 ['nc|ENSG00000236939|P0C853|BAALC-AS2', 'ENST00000436771.1_1_8:104145257-104153519:-|nuORF'] 76315 8280 NPRRWWRWCWQ True NCI_RA007_Epitope_Rep5 1672.7946031339197 1672.7935099358601 38.528 2 -0.38504051291384694 0.1042533999444907 0.8541461929776691 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 50045 4964 KKENGPTLSTI True NCI_RA007_Epitope_Rep3 1186.65575210558 1186.65409490379 26.523 3 -0.3850425717832824 0.1042533999444907 0.8541484047210917 ['ENSG00000008083|ENST00000341776|JARID2', 'nc|ENSG00000008083|Q92833-3|JARID2'] 6497 16301 APSRVLVIP True PC9_epitope_Rep5 950.5913013742198 950.59020993586 67.696 2 -0.385157317640039 0.1042533999444907 0.8542716532965149 ['ENSG00000137414|ENST00000259963|FAM8A1'] 140532 7852 YRNRNWEK True PC9_epitope_Rep1 1164.57883919756 1164.57774993586 35.029 2 -0.3852109932365989 0.1042533999444907 0.854329294603859 ['ENSG00000213471|ENST00000641754|TTLL13', 'nc|ENSG00000213471|A6NNM8|TTLL13'] 10812 14259 CSLDAHEICL True PC9_epitope_Rep5 1102.4787163437402 1102.47760993586 59.851 2 -0.3852487824783729 0.1042598952371041 0.854369871367121 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF', 'ENST00000487266.1_1_21:27107719-27124637:+|nuORF'] 100181 6374 SITTVQIQK True NCI_RA007_Epitope_Rep4 1016.5866099166 1016.58550993586 31.121 2 -0.3852736770254516 0.1042598952371041 0.85439660024743 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 45868 12360 ISDRPSLSV True PC9_epitope_Rep5 972.52400966004 972.52290993586 52.538 2 -0.38528406908040164 0.1042598952371041 0.8544077575594249 ['nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 53817 6101 KTEEGVNLGQA True H1975_Epitope_Rep2 1144.5724164044398 1144.5713099358602 28.444 2 -0.38533523589249924 0.1042598952371041 0.8544626881700413 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 107673 12406 SVQTLPDSH True PC9_epitope_Rep5 982.4719740871799 982.47086993586 52.718 2 -0.38534407826332984 0.1042598952371041 0.8544721802968793 ['ENST00000330817.10_1_22:50294661-50295054:-|nuORF'] 42381 13223 IEDCVVLFIP True PC9_epitope_Rep3 1146.59948309942 1146.59838993586 55.897 2 -0.3853449887241279 0.1042598952371041 0.8544731576488224 ['ENST00000335698.4_1_10:7841012-7841072:+|nuORF'] 119970 5869 VDPGHPPAS True NCI_RA007_Epitope_Rep3 875.41373093507 875.41262993586 30.064 2 -0.3854516067938012 0.10428915829821184 0.8545875941525075 ['ENST00000487659.1_1_1:1342042-1342597:-|nuORF'] 128556 18614 VPTAVFGV True PC9_epitope_Rep6 788.4432401582 788.44214993586 84.241 2 -0.3854770081759588 0.10428915829821184 0.8546148539385005 ['ENSG00000173080|ENST00000368318|RXFP4'] 65598 25515 LRVWGLELRRK True PC9_epitope_Rep4 1424.8728363712796 1424.87172993586 107.18 2 -0.38552617252352955 0.10428915829821184 0.8546676105168611 ['nc|ENSG00000126562|Q96J92-2|WNK4'] 122111 15217 VGAEDHLLL True PC9_epitope_Rep2 965.51819600361 965.51708993586 63.796 2 -0.38562632002160174 0.10433938048492837 0.8547750561840899 ['ENST00000397861.6_1_17:54910427-54911098:-|nuORF'] 82448 8504 PPPPQPPPP True PC9_epitope_Rep3 922.4912529797798 922.49014993586 37.671 2 -0.3857337977338278 0.10438960092960335 0.8548903376589813 ['nc|ENSG00000106078|O75128-5|COBL', 'nc|ENSG00000106078|O75128-4|COBL', 'ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000203867|ENST00000369519|RBM20', 'ENSG00000090470|ENST00000204549|PDCD7', 'nc|ENSG00000106078|O75128-7|COBL', 'nc|ENSG00000106078|O75128-2|COBL', 'nc|ENSG00000106078|O75128-3|COBL', 'ENSG00000106078|ENST00000265136|COBL'] 110158 14489 TEPELIQV True PC9_epitope_Rep4 927.4913125494298 927.49020993586 63.643 2 -0.3857613742770778 0.10440332286987739 0.8549199117197407 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 114128 10589 TPHFSGLAA True PC9_epitope_Rep4 899.4501164437899 899.44900993586 48.473 2 -0.3857623364218477 0.10440332286987739 0.8549209435227281 ['ENSG00000178952|ENST00000313511|TUFM'] 65685 7968 LSAREGSAERR True NCI_RA007_Epitope_Rep5 1230.6428960060998 1230.64178993586 37.337 2 -0.3858458651128629 0.10445353959279942 0.8550105105803797 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF'] 119011 11206 VAEYTFRQFR True H1975_Epitope_Rep1 1315.66731984879 1315.6662299358602 48.074 2 -0.3859135883360101 0.10446907028770616 0.8550831164998087 ['RENBP|p.Q351K|1|0.51|ENSG00000102032|chrX:153940128-153940128|G/T|missense_variant', 'nc|ENSG00000102032|P51606-3|RENBP', 'ENSG00000102032|ENST00000393700|RENBP'] 14628 7862 DVDGYCYNGIC True H1975_Epitope_Rep1 1220.4478101382801 1220.44670993586 35.194 2 -0.3859707340494364 0.1045019422863485 0.8551443731937866 ['ADAM12|p.H681Tfs*29|1|0.16|ENSG00000148848|chr10:126043112-126043112|G/-|frameshift_variant', 'nc|ENSG00000148848|O43184-3|ADAM12', 'nc|ENSG00000148848|O43184-4|ADAM12', 'nc|ENSG00000148848|O43184-2|ADAM12', 'ENSG00000148848|ENST00000448723|ADAM12', 'nc|ENSG00000148848|O43184|ADAM12'] 106416 10294 STIHEKAMIQ True NCI_RA007_Epitope_Rep3 1156.5910436740398 1156.5899499358602 47.563 2 -0.3859840679488301 0.10452756246857063 0.8551586651171408 ['ENSG00000175267|ENST00000389398|VWA3A', 'nc|ENSG00000175267|A6NCI4-2|VWA3A'] 55205 5615 LACRPFHPK True NCI_RA007_Epitope_Rep1 1067.56985473699 1067.56874993586 25.905 2 -0.38599570084172313 0.10452756246857063 0.8551711334488523 ['ENSG00000151093|ENST00000280701|OXSM'] 138802 17185 YIVSCKQTEVP True PC9_epitope_Rep3 1265.63257413285 1265.63092490379 71.259 3 -0.38602441961380174 0.10452756246857063 0.8552019132396715 ['ENSG00000162390|ENST00000343744|ACOT11', 'nc|ENSG00000162390|Q8WXI4|ACOT11'] 91233 14527 RGGGCGGGG True NCI_RA007_Epitope_Rep3 676.2711065359999 676.27055496793 64.45 1 -0.3860249617869271 0.10452756246857063 0.8552024943019567 ['ENST00000407595.2_1_2:56411641-56419673:+|nuORF'] 80339 6870 PGGGRWLPAG True PC9_epitope_Rep1 966.5035489989798 966.50244993586 31.23 2 -0.3860278716511721 0.10452756246857063 0.8552056128730484 ['ENST00000282096.8_1_11:14665308-14793517:+|nuORF'] 67048 9907 LSPVPALKPTP True H1975_Epitope_Rep2 1118.66994561774 1118.6688499358602 43.096 2 -0.386038488926606 0.10454127724506251 0.8552169914782062 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 34095 7303 GLYGSLFP True H1975_Epitope_Rep3 852.43815477776 852.43704993586 33.066 2 -0.3860605428687179 0.10454127724506251 0.8552406259186794 ['nc|ENSG00000147606|Q8TE54-2|SLC26A7', 'ENSG00000147606|ENST00000276609|SLC26A7', 'SLC26A7|p.L235Ffs*2|1|0.19|ENSG00000147606|chr8:91334357-91334357|G/-|frameshift_variant'] 58176 9655 LEKTDGSV True PC9_epitope_Rep3 847.4287122928699 847.42760993586 42.086 2 -0.38615371238114937 0.10457414343182134 0.8553404587831779 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 46910 17677 ITMTVAHEL True PC9_epitope_Rep5 1013.5215671318898 1013.52046993586 73.009 2 -0.38617884814336645 0.10460700847883758 0.8553673884409244 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1'] 130847 7643 VTAVVGKL True PC9_epitope_Rep2 785.5010893874899 785.49998993586 34.767 2 -0.38620213623435057 0.10463987238617055 0.8553923371304913 ['QDPR|p.E70V|1|0.33|ENSG00000151552|chr4:17504465-17504465|T/A|missense_variant'] 82392 18743 PPLPLPPPP True PC9_epitope_Rep3 923.5480395799099 923.54694993586 77.317 2 -0.38630529353336446 0.1046727351538795 0.8555028336951997 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 12186 22313 DIFGCVADIGW True PC9_epitope_Rep5 1194.5379454720198 1194.5368499358601 90.834 2 -0.38630605567815457 0.10468644346966728 0.8555036499634021 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 44094 16744 IINFISWAP True PC9_epitope_Rep2 1059.57531695691 1059.5742099358602 69.652 2 -0.3863122967637404 0.10468644346966728 0.8555103342018455 ['ENSG00000011028|ENST00000303375|MRC2', 'MRC2|p.R1138Gfs*67|1|0.25|ENSG00000011028|chr17:62689598-62689598|C/-|frameshift_variant', 'ENST00000446119.2_1_17:60758997-60759418:+|nuORF'] 15893 17222 EDKHCLSYL True PC9_epitope_Rep3 1106.50664534374 1106.50554993586 71.398 2 -0.38634392147725327 0.10470015083479256 0.8555442029344037 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'CACNA1H|p.T2226Sfs*36|1|0.19|ENSG00000196557|chr16:1220609-1220609|C/-|frameshift_variant', 'ENSG00000196557|ENST00000348261|CACNA1H'] 71914 9810 MEQKEKSY True H1975_Epitope_Rep3 1041.4800962427298 1041.47898993586 42.76 2 -0.38634751927146876 0.10470015083479256 0.8555480558595724 ['ENSG00000162645|ENST00000370466|GBP2'] 48457 6835 KAAQVTAG True NCI_RA007_Epitope_Rep5 744.4130026590799 744.4124549679301 32.975 1 -0.38636279125691614 0.10471567267683772 0.8555644104648864 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 87503 12045 QQGPVGVNV True PC9_epitope_Rep2 896.4715801643599 896.4710349679301 51.647 1 -0.38640619463361636 0.10472393169801508 0.8556108874518887 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.T950P|1|0.48|ENSG00000196924|chrX:154361766-154361766|T/G|missense_variant'] 11954 4351 DHNDGLGNAF True NCI_RA007_Epitope_Rep4 1058.44173658806 1058.4406299358602 23.082 2 -0.38642109965870924 0.10472393169801508 0.855626846876863 ['ENSG00000271447|ENST00000605424|MMP28'] 60711 5750 LHQGHRQRP True PC9_epitope_Rep5 1127.6060570049099 1127.60440490379 27.11 3 -0.3864297058065347 0.10472393169801508 0.8556360615783153 ['ENST00000377625.6_1_13:75900405-75901937:-|nuORF'] 83676 18777 PVEVQEVSL True PC9_epitope_Rep3 998.5284263341398 998.5273299358599 77.445 2 -0.38644807751812177 0.10472393169801508 0.8556557317545243 ['nc|ENSG00000141425|Q96P16-3|RPRD1A', 'ENSG00000141425|ENST00000399022|RPRD1A'] 22909 14875 EVECSSENPQL True PC9_epitope_Rep1 1233.5183322262499 1233.51722993586 62.036 2 -0.3864643741639239 0.10472393169801508 0.8556731794905291 ['ENSG00000198796|ENST00000361673|ALPK2', 'ALPK2|p.T1489Lfs*22|1|0.17|ENSG00000198796|chr18:58535722-58535722|T/-|frameshift_variant', 'ALPK2|p.P574Hfs*2|1|0.23|ENSG00000198796|chr18:58579055-58579055|G/-|frameshift_variant', 'ALPK2|p.S935Afs*19|1|0.17|ENSG00000198796|chr18:58537385-58537385|G/-|frameshift_variant'] 82053 18476 PLYIGEVVL True NCI_RA007_Epitope_Rep4 1001.57973363101 1001.57862993586 79.97 2 -0.38651897741180924 0.10475678674201713 0.855731634669156 ['ENSG00000255154|ENST00000461393|HTD2'] 34854 17742 GQKWKELGDSL True NCI_RA007_Epitope_Rep4 1259.65100107831 1259.64990993586 76.801 2 -0.3865763979014235 0.1047878241575371 0.8557930977075126 ['ENSG00000186448|ENST00000344387|ZNF197'] 38248 11370 HEDVNVGSI True PC9_epitope_Rep2 968.45632402304 968.45522993586 49.056 2 -0.38658778914258746 0.1047878241575371 0.855805289932078 ['ENSG00000133302|ENST00000265140|SLF1'] 77950 19498 NVLKRMTM True PC9_epitope_Rep6 991.53069234695 991.52958993586 87.66 2 -0.386766914685903 0.10487267936695037 0.8559969678195846 ['NCKAP1L|p.I910M|1|0.27|ENSG00000123338|chr12:54531774-54531774|C/G|missense_variant'] 126454 22373 VLLCGCPV True H1975_Epitope_Rep1 802.40811760278 802.40700993586 93.09 2 -0.38686595134500096 0.10490552955451551 0.8561029098854619 ['ENST00000378536.4_1_1:2240087-2240159:+|nuORF'] 107599 17868 SVPNKDVFQEL True PC9_epitope_Rep3 1274.65066672514 1274.6495699358602 73.927 2 -0.3869122170987598 0.10493837860324834 0.8561523931129202 ['ENSG00000115919|ENST00000264170|KYNU'] 11550 9156 DFSDEEQSV True PC9_epitope_Rep3 1054.4090990471 1054.40800993586 40.159 2 -0.38695921906303654 0.10496940703378226 0.8562026582507013 ['ENSG00000150477|ENST00000280020|KIAA1328'] 20217 10219 ENLAGVRTN True NCI_RA007_Epitope_Rep1 972.49885754136 972.49776993586 43.76 2 -0.38697282241795894 0.10496940703378226 0.8562172050030209 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3', 'nc|ENSG00000140859|Q9BVG8-5|KIFC3'] 8588 4436 ATVSSADGKPP True H1975_Epitope_Rep2 1028.5138388991597 1028.51274993586 22.174 2 -0.38699551056124537 0.10499861342207432 0.8562414655452327 ['INSM2|p.A504Gfs*37|1|0.33|ENSG00000168348|chr14:35535763-35535763|C/-|frameshift_variant', 'ENSG00000168348|ENST00000307169|INSM2'] 24400 20342 FAAPLILL True H1975_Epitope_Rep2 856.54222592348 856.54112993586 84.297 2 -0.3870295331190356 0.10499861342207432 0.8562778436154781 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 75259 16938 NIFIRRAI True PC9_epitope_Rep1 1001.6134338011299 1001.61232993586 69.975 2 -0.3870503007931974 0.10499861342207432 0.8563000476909811 ['ENSG00000204361|ENST00000389586|NXPE2'] 120286 14732 VEDLINIHFQR True NCI_RA007_Epitope_Rep2 1382.7306483813402 1382.7295499358602 61.976 2 -0.38708961374630535 0.10501412551779123 0.8563420767787349 ['ENSG00000123609|ENST00000243346|NMI'] 85085 14943 QEKLQLEMHLR True NCI_RA007_Epitope_Rep2 1423.76056861063 1423.7594699358601 62.805 2 -0.38716328172428527 0.10508163194564803 0.8564208240754894 ['nc|ENSG00000112984|O95235-2|KIF20A', 'ENSG00000112984|ENST00000394894|KIF20A'] 98500 13151 SFLCCAEA True H1975_Epitope_Rep1 842.3302612048999 842.32971496793 55.678 1 -0.38723940529370326 0.10514184704434779 0.8565021820313637 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|245|3|anti-sense'] 69426 7552 LTYFQQQQRR True NCI_RA007_Epitope_Rep5 1366.7105816430999 1366.7089349037901 35.735 3 -0.3872632706745772 0.10514184704434779 0.8565276854588805 ['nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 57832 9288 LEETPTAVST True PC9_epitope_Rep1 1046.5131701928199 1046.5120699358602 40.58 2 -0.387264725074077 0.10514184704434779 0.8565292396379821 ['ENST00000316881.8_1_17:54968342-54968558:-|nuORF'] 114898 14376 TQSELATAL True PC9_epitope_Rep4 932.4814761417199 932.48092496793 63.206 1 -0.38728913063299303 0.10514184704434779 0.8565553187621996 ['ENSG00000138629|ENST00000395081|UBL7'] 135984 13386 WQLQDDKNQSL True PC9_epitope_Rep4 1373.6575430107298 1373.65644993586 59.392 2 -0.38730674401112314 0.10514184704434779 0.8565741390221122 ['ENSG00000119655|ENST00000555619|NPC2'] 12716 18452 DLEAVLESSEE True PC9_epitope_Rep5 1219.54559251991 1219.5444899358602 75.998 2 -0.3874068625565606 0.10517468459725496 0.8566811030844347 ['ENSG00000050555|ENST00000361069|LAMC3'] 140477 18789 YRIREFRQTFR True PC9_epitope_Rep4 1570.84807817542 1570.84642490379 80.357 3 -0.3875032496916339 0.10519019149120527 0.8567840570432943 ['ENSG00000128271|ENST00000337539|ADORA2A'] 114060 10095 TPEQIEKIY True H1975_Epitope_Rep1 1119.5811901829898 1119.58008993586 43.767 2 -0.38756442720410955 0.1052056978477108 0.856849390586059 ['ENSG00000086288|ENST00000199447|NME8'] 26158 21250 FHCFFLGL True PC9_epitope_Rep4 982.4734947406598 982.47238993586 89.902 2 -0.38774370006944076 0.10525586150726948 0.8570407887241107 ['ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 20697 9684 EQEEKEDEDP True H1975_Epitope_Rep2 1246.4837205393399 1246.4826299358601 42.231 2 -0.38775413319198315 0.10526954201251104 0.8570519250494829 ['ENSG00000198483|ENST00000355594|ANKRD35'] 14798 19199 DVQMLLRFG True PC9_epitope_Rep6 1077.5641006502099 1077.56300993586 86.502 2 -0.38775437899376064 0.10526954201251104 0.8570521874152983 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 34592 7497 GPTPDHPQGP True PC9_epitope_Rep3 1001.45665837621 1001.45556993586 33.84 2 -0.38777961681393525 0.10528504591925143 0.8570791251611425 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 93970 20591 RRIFIQLMKRF True H1975_Epitope_Rep2 1506.8969429441397 1506.89530490379 85.295 3 -0.38791172470633334 0.10533337953978375 0.8572201056719533 ['nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6', 'nc|ENSG00000186976|Q5THR3-6|EFCAB6', 'ENST00000404038.5_1_22:44079617-44178198:-|nuORF'] 74403 14113 NESICDEFAP True H1975_Epitope_Rep2 1123.44919003727 1123.44808993586 59.44 2 -0.387918961871069 0.10533337953978375 0.8572278276539127 ['ENSG00000150347|ENST00000279873|ARID5B', 'nc|ENSG00000150347|Q14865-3|ARID5B'] 42879 8957 IEQWHKKHKEK True NCI_RA007_Epitope_Rep1 1489.8153810648098 1489.81372490379 38.841 3 -0.3879331106545476 0.10534705617354541 0.8572429238904278 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 87458 9121 QQALTQLQS True H1975_Epitope_Rep1 1015.5298233164699 1015.52872993586 39.988 2 -0.3879368693573954 0.10534705617354541 0.8572469342064487 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 107068 9629 SVGREVCI True PC9_epitope_Rep3 861.4378375079299 861.43674993586 41.988 2 -0.38801809455228853 0.10539538429551598 0.8573335882314632 ['ENST00000251691.4_1_6:138483291-138531090:+|nuORF'] 66284 10610 LSFLFQLSF True PC9_epitope_Rep1 1100.5906326678798 1100.5895299358601 45.704 2 -0.3880368705501048 0.10539538429551598 0.8573536168442374 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4', 'nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF'] 22920 7402 EVEEDKENKEY True H1975_Epitope_Rep3 1410.6150690620598 1410.61342490379 33.451 3 -0.38809959842069364 0.10540540540540541 0.8574205232287477 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 46216 19501 ISNFAQEAL True PC9_epitope_Rep2 991.4974605590298 991.49636993586 80.393 2 -0.3881413612265905 0.10540540540540541 0.857465062630256 ['ENSG00000140905|ENST00000315467|GCSH'] 3440 5380 AGKFEDKLIQ True NCI_RA007_Epitope_Rep3 1147.6237237013097 1147.62208490379 28.169 3 -0.38815888239803764 0.10540540540540541 0.8574837474187402 ['ENSG00000004139|ENST00000585482|SARM1', 'nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENST00000379061.8_1_17:26712241-26725107:+|nuORF'] 73651 5149 MYFHDRNWEKK True NCI_RA007_Epitope_Rep4 1552.7245174550796 1552.7228849037901 26.33 3 -0.3881675706884587 0.10540540540540541 0.8574930124367458 ['ENST00000531381.1_1_11:121960919-121961012:-|nuORF'] 26225 9591 FHDPDSAVV True PC9_epitope_Rep2 985.4505103666099 985.44940993586 42.236 2 -0.3882217358113891 0.10541725135561215 0.8575507688544286 ['SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 88075 18930 QRRIRRHKNYL True NCI_RA007_Epitope_Rep1 1538.9018450837798 1538.9007499358602 77.776 2 -0.3882235084197366 0.10541725135561215 0.8575526588698534 ['AMFR|p.M380Vfs*3|1|0.07|ENSG00000159461|chr16:56389322-56389323|AT/-|frameshift_variant', 'ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 73758 8571 NAEIEPDDY True H1975_Epitope_Rep3 1064.42983449168 1064.42872993586 37.959 2 -0.3882329788226939 0.10541725135561215 0.8575627564056041 ['nc|ENSG00000157036|Q9Y2C4-3|EXOG', 'nc|ENSG00000157036|Q9Y2C4-4|EXOG', 'ENSG00000157036|ENST00000287675|EXOG'] 7812 9726 ASVFPDRIFVM True H1975_Epitope_Rep3 1280.6587293110401 1280.65762993586 42.431 2 -0.38833928070515167 0.10544824599393676 0.8576760825438355 ['nc|ENSG00000157833|Q75VX8-3|GAREM2', 'nc|ENSG00000157833|Q75VX8-2|GAREM2', 'ENSG00000157833|ENST00000401533|GAREM2'] 127592 8898 VNVDEVGG True PC9_epitope_Rep3 787.3711974167499 787.37064496793 39.178 1 -0.3883797686833101 0.10544824599393676 0.8577192386233983 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 123509 3582 VGPHLTAK True NCI_RA007_Epitope_Rep4 821.47593726881 821.47484993586 19.812 2 -0.38839142140539057 0.10548106572428369 0.8577316585002434 ['ENSG00000185361|ENST00000327473|TNFAIP8L1'] 83808 18939 PVLHPSDLI True PC9_epitope_Rep5 989.55458151233 989.55348993586 77.872 2 -0.38848258248417455 0.10549656140107748 0.8578288096932075 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'nc|ENSG00000198522|Q9HCN4-2|GPN1', 'nc|ENSG00000198522|Q9HCN4-3|GPN1'] 103009 20471 SPFLGVGL True PC9_epitope_Rep2 788.4432401582 788.44214993586 84.171 2 -0.38859653552726886 0.10554670177383592 0.857950221951662 ['ENST00000583277.1_1_17:7467715-7468388:+|nuORF'] 4689 13191 ALASHLIEA True PC9_epitope_Rep3 923.5076313199099 923.50652993586 55.775 2 -0.3886718035600835 0.10559135314903347 0.8580303995688263 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 63070 10392 LLQKGPAP True PC9_epitope_Rep1 822.4963383602199 822.49524993586 44.857 2 -0.38868520140204293 0.10559135314903347 0.8580446698790286 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112'] 113620 13346 TLVSAAEGAP True PC9_epitope_Rep1 914.4709114580199 914.46980993586 56.195 2 -0.3886969597146748 0.10559135314903347 0.8580571935337197 ['nc|ENSG00000078053|P49418-2|AMPH', 'ENSG00000078053|ENST00000356264|AMPH'] 141852 12567 YVDIICPHY True H1975_Epitope_Rep1 1121.52156713189 1121.52046993586 53.385 2 -0.38876063804662775 0.10559135314903347 0.8581250108106768 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155100369-155106166:+|nuORF'] 46000 9630 ISFQTQTVI True H1975_Epitope_Rep3 1035.5600608155898 1035.5589699358602 42.058 2 -0.38884201247528716 0.10562233692451588 0.8582116600471817 ['ENST00000584386.5_1_17:25958291-25974145:+|nuORF', 'nc|ENSG00000168961|O00182-5|LGALS9', 'nc|ENSG00000168961|O00182-3|LGALS9'] 44975 10610 IPALICLHPLF True H1975_Epitope_Rep3 1235.71003660791 1235.7089299358602 45.88 2 -0.3888604332496895 0.10562233692451588 0.8582312726511334 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 141900 19871 YVEAEIHVP True PC9_epitope_Rep3 1055.52876068731 1055.52766993586 81.67 2 -0.3889672431419445 0.10563599833725924 0.8583449769569089 ['nc|ENSG00000133121|Q9Y3M8-3|STARD13', 'nc|ENSG00000133121|Q9Y3M8-4|STARD13', 'nc|ENSG00000133121|Q9Y3M8-2|STARD13', 'ENSG00000133121|ENST00000336934|STARD13'] 69388 8455 LTWEFHPP True PC9_epitope_Rep1 1025.4970666362099 1025.49596993586 37.358 2 -0.38896852298602347 0.10563599833725924 0.858346339245337 ['ENST00000397722.5_1_16:446739-446817:+|nuORF'] 137315 17681 YDEYRYRSVIK True NCI_RA007_Epitope_Rep1 1490.7517777487399 1490.75068993586 72.911 2 -0.3890107402275937 0.10565148864679495 0.8583912737929263 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR', 'nc|ENSG00000001626|P13569-3|CFTR'] 68643 10099 LTIGHKYPSKE True H1975_Epitope_Rep1 1271.68738658703 1271.68628993586 43.782 2 -0.3890237922412727 0.10566697841975822 0.8584051650244339 ['STOX1|p.Y782Lfs*9|1|0.29|ENSG00000165730|chr10:68886139-68886140|-/T|frameshift_variant', 'STOX1|p.L805Cfs*20|1|0.18|ENSG00000165730|chr10:68886206-68886206|G/-|frameshift_variant', 'ENSG00000165730|ENST00000298596|STOX1', 'STOX1|p.G417Vfs*55|1|0.25|ENSG00000165730|chr10:68885044-68885044|G/-|frameshift_variant'] 29427 12810 FVDWC[Carbamidomethyl]PTGFK True H1975_Epitope_Rep1 1255.5695802328999 1255.56848993586 54.338 2 -0.389058709148365 0.10567880708681872 0.8584423249915678 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'nc|ENSG00000178462|A6NHL2-2|TUBAL3', 'ENSG00000178462|ENST00000380419|TUBAL3', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 135048 7895 WDTGWCWLPR True NCI_RA007_Epitope_Rep3 1318.59171238038 1318.5906099358601 38.169 2 -0.38908977457118465 0.10567880708681872 0.8584753835773086 ['ENST00000562593.5_1_16:88909039-88909435:-|nuORF'] 92411 23467 RLQLPRLRVRE True NCI_RA007_Epitope_Rep4 1434.8895490645798 1434.88844993586 101.84 2 -0.3891076936463434 0.10567880708681872 0.8584944512828293 ['nc|ENSG00000105227|Q9BXM0-3|PRX', 'ENST00000291825.11_2_19:40899875-40904000:-|nuORF', 'ENSG00000105227|ENST00000324001|PRX'] 52798 11760 KNQRQRQHEV True PC9_epitope_Rep5 1321.69632856129 1321.69468490379 50.233 3 -0.3891420610952315 0.10571161373004052 0.8585310195488011 ['nc|ENSG00000284701|A6NEH6|TMEM247'] 28042 27655 FQRKRKSRRYY True PC9_epitope_Rep1 1586.8906116937399 1586.8889549037901 113.35 3 -0.38929999162017 0.10572160842309423 0.8586990269700175 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 23075 13023 EVIFTTVCIP True H1975_Epitope_Rep2 1120.58383303528 1120.58272993586 55.212 2 -0.3893170223213647 0.10572160842309423 0.858717140740323 ['ENSG00000188324|ENST00000358433|OR6C6'] 11272 8729 DEGIFISK True NCI_RA007_Epitope_Rep2 907.46509780159 907.46400993586 38.599 2 -0.38932846628445406 0.10572160842309423 0.8587293120912178 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'SCRIB|p.P1129S|1|0.44|ENSG00000180900|chr8:143803676-143803676|G/A|missense_variant'] 119425 13541 VAQLKQLQAET True PC9_epitope_Rep4 1227.6823012065897 1227.6812099358601 59.981 2 -0.3893408242260841 0.10572160842309423 0.8587424551599995 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 120336 11113 VEEDQDPSCP True PC9_epitope_Rep1 1117.42336921225 1117.4222699358602 47.631 2 -0.38938044022768076 0.10574525557556448 0.8587845855768153 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 31707 13226 GEGGFLTEL True NCI_RA007_Epitope_Rep5 921.4443623570099 921.44381496793 57.554 1 -0.3893869347833312 0.10574525557556448 0.8587914919798433 ['ENST00000510258.1_2_6:83901003-83902945:-|nuORF'] 132838 18013 VVLGLMISSL True PC9_epitope_Rep4 1030.6096538603 1030.60854993586 77.346 2 -0.3893910600097089 0.10574525557556448 0.858795878751705 ['ENST00000581045.1_2_17:71282696-71305904:-|nuORF'] 42811 10934 IEPLTFYLDP True PC9_epitope_Rep1 1206.61724133854 1206.6161499358602 46.944 2 -0.38939589943300607 0.10574525557556448 0.8588010249494946 ['ENSG00000197594|ENST00000647893|ENPP1', 'ENST00000459624.1_1_6:132185674-132198340:+|nuORF'] 112449 10299 TLDEEDSEGP True PC9_epitope_Rep2 1090.4302284144999 1090.4291299358601 44.944 2 -0.38939684993913454 0.10574525557556448 0.8588020357022706 ['nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B', 'nc|ENSG00000184588|Q07343-4|PDE4B', 'nc|ENSG00000184588|Q07343-2|PDE4B'] 120285 14884 VEDLINIHFQR True NCI_RA007_Epitope_Rep1 1382.7306483813402 1382.7295499358602 61.954 2 -0.3894086668354802 0.10574525557556448 0.8588146014165934 ['ENSG00000123609|ENST00000243346|NMI'] 131612 15906 VTLQNLGV True PC9_epitope_Rep5 842.4861675993399 842.48506993586 66.174 2 -0.38944747252013256 0.1057762232918932 0.8588558637961919 ['ENSG00000115850|ENST00000264162|LCT'] 1306 4813 AEDREQLVA True H1975_Epitope_Rep1 1029.50908787189 1029.50798993586 23.586 2 -0.38945243198405993 0.1057762232918932 0.8588611369712599 ['ENSG00000100867|ENST00000250383|DHRS2', 'ENST00000556729.1_1_14:24108037-24109131:+|nuORF', 'ENST00000553896.5_1_14:24099332-24110898:+|nuORF', 'nc|ENSG00000100867|Q13268-2|DHRS2'] 92969 6478 RPKGLGLGA True PC9_epitope_Rep5 867.5290354708299 867.52792993586 29.89 2 -0.38946786414425655 0.10578804300777395 0.8588775449157757 ['ENSG00000068394|ENST00000156109|GPKOW'] 27195 10020 FLLPRLDTSNE True NCI_RA007_Epitope_Rep1 1303.67721582615 1303.67610993586 42.982 2 -0.389544344189538 0.10578804300777395 0.8589588524047495 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 96532 12278 SADRGLVL True PC9_epitope_Rep5 829.46576650793 829.46466993586 52.216 2 -0.3895523867632892 0.10578804300777395 0.8589674018131427 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 27520 7029 FMRSKRAADF True PC9_epitope_Rep2 1227.61826148139 1227.6166049037902 32.439 3 -0.38964039255566085 0.10583815229059178 0.8590609435145856 ['ENSG00000268009|ENST00000595689|SSX4', 'ENSG00000269791|ENST00000595235|SSX4B', 'nc|ENSG00000269791|O60224-2|SSX4'] 128326 14963 VPPSAYIL True H1975_Epitope_Rep2 858.4851049701799 858.48400993586 62.706 2 -0.3897354178105005 0.10586544787230359 0.8591619254215878 ['ENSG00000256713|ENST00000312403|PGA5', 'ENSG00000229859|ENST00000325558|PGA3', 'ENSG00000229183|ENST00000378149|PGA4'] 46733 8977 ITEKTEDSSV True NCI_RA007_Epitope_Rep4 1107.52954853295 1107.5284499358602 41.365 2 -0.38977161308257535 0.10586544787230359 0.8592003839170553 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1'] 23651 6898 EWWFRWRLDRY True H1975_Epitope_Rep1 1711.8371791385498 1711.8355349037902 31.573 3 -0.3897834821433311 0.10586544787230359 0.8592129944471709 ['ENSG00000127995|ENST00000297273|CASD1'] 10572 9786 CMSLHGGIDQY True H1975_Epitope_Rep1 1222.51107910118 1222.5099899358602 42.572 2 -0.3897954218687049 0.10586544787230359 0.859225679717132 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 108583 20435 SYNWTFYTL True PC9_epitope_Rep4 1193.53932537101 1193.53822993586 86.751 2 -0.38986067892132953 0.10588092723715874 0.8592950055652336 ['ENSG00000119899|ENST00000355773|SLC17A5'] 14759 20471 DVNLAYEIL True PC9_epitope_Rep4 1048.5440763982801 1048.5429699358601 86.888 2 -0.38992505730121835 0.10592736211612368 0.8593633880091591 ['ENSG00000153767|ENST00000283875|GTF2E1'] 82293 2756 PPHPPPPPP True H1975_Epitope_Rep2 931.49158733295 931.49048993586 14.629 2 -0.3899265909173479 0.10592736211612368 0.8593650168893806 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 48311 22305 IYQYFEIF True PC9_epitope_Rep2 1121.5433481222897 1121.5422499358601 91.275 2 -0.3899830094093691 0.10592736211612368 0.8594249360551905 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 62113 9370 LLEEGEKIQH True NCI_RA007_Epitope_Rep2 1194.6244519773 1194.62334993586 41.056 2 -0.39010973629768736 0.10597746118025862 0.8595594985496443 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3'] 80573 11292 PGPSASSLL True PC9_epitope_Rep5 827.43888305375 827.43778993586 48.428 2 -0.39023452826658384 0.10607581789856327 0.8596919692490382 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 98504 19080 SFLFHDII True PC9_epitope_Rep1 990.51746772762 990.51636993586 78.181 2 -0.3902377489768811 0.10607581789856327 0.8596953876484907 ['ENST00000238831.8_1_2:32517356-32517413:+|nuORF'] 99458 21316 SIASEWFLI True PC9_epitope_Rep1 1064.55424715916 1064.5531499358601 86.82 2 -0.39024981100950845 0.10607581789856327 0.8597081898378293 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 49417 7066 KEVKLSVP True H1975_Epitope_Rep2 898.5487678558999 898.54766993586 32.108 2 -0.39028803466099365 0.10609129147842343 0.859748756714668 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 79873 20380 PELEMWSL True PC9_epitope_Rep5 1003.4684689298699 1003.46736993586 83.427 2 -0.39038490418592625 0.10609941844364441 0.8598515491937586 ['ENSG00000115687|ENST00000234040|PASK', 'nc|ENSG00000115687|Q96RG2-2|PASK', 'ENST00000472072.5_1_2:242045983-242047931:-|nuORF'] 121695 22332 VFLEKPTL True PC9_epitope_Rep5 945.5535188831699 945.55242993586 90.909 2 -0.3903929938167164 0.10609941844364441 0.8598601324559508 ['MMP20|p.G278E|1|0.36|ENSG00000137674|chr11:102606655-102606655|C/T|missense_variant'] 103560 14940 SPSIHLTDTL True PC9_epitope_Rep3 1082.56078909158 1082.5596899358602 62.599 2 -0.39039818131782755 0.10609941844364441 0.859865636419041 ['ENST00000474550.5_1_2:101601378-101601966:+|nuORF'] 137031 7794 YALPKDLQI True PC9_epitope_Rep2 1059.59644632431 1059.5953499358602 35.351 2 -0.39043170798575416 0.10609941844364441 0.8599012068525618 ['SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2'] 82572 13037 PPVPLPAPS True PC9_epitope_Rep3 873.49600400705 873.49490993586 55.173 2 -0.3904770100689935 0.10609941844364441 0.8599492663543961 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 126199 16051 VLGAQPDLLS True PC9_epitope_Rep5 1011.56006081559 1011.55896993586 66.728 2 -0.39055404644825653 0.10616681378403171 0.8600309807801397 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 135262 10277 WFREFWEQRFR True NCI_RA007_Epitope_Rep1 1685.82152907441 1685.81989490379 43.983 3 -0.39063056183990014 0.10619959154003254 0.8601121290001061 ['ENSG00000164082|ENST00000395052|GRM2'] 67241 9627 LSRNRIRCLNP True PC9_epitope_Rep3 1340.745921606 1340.74426490379 41.981 3 -0.3907203158057308 0.10622501427755568 0.860207300227183 ['ENSG00000220008|ENST00000698372|LINGO3'] 46653 7409 ITDNPGLQ True PC9_epitope_Rep4 856.42904664604 856.4279499358599 35.846 2 -0.3907362550303379 0.10622501427755568 0.8602241995682579 ['ENSG00000150261|ENST00000279783|OR8K1', 'OR8K1|p.G78Vfs*11|1|0.28|ENSG00000150261|chr11:56346267-56346267|C/-|frameshift_variant'] 9393 6740 AVSTWRFRLDP True H1975_Epitope_Rep1 1346.7095190139398 1346.70787490379 30.966 3 -0.3907904193586659 0.10622501427755568 0.8602816222269621 ['ENST00000608232.5_1_3:183851865-183852039:-|nuORF'] 605 4674 AARSKAES True PC9_epitope_Rep4 818.4246299719399 818.42352993586 24.508 2 -0.39088198054372164 0.10622501427755568 0.860378676304308 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF', 'ENST00000514450.2_1_4:15471657-15513157:+|nuORF'] 128680 16001 VPVRYRREHLS True PC9_epitope_Rep1 1410.7844152897 1410.7833099358602 66.359 2 -0.390899572081237 0.10622501427755568 0.8603973210219431 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1'] 63716 19203 LNCCFDPFIYY True H1975_Epitope_Rep1 1396.58318141228 1396.58208993586 80.019 2 -0.39104284884434265 0.10632517089210003 0.8605491497919772 ['ENSG00000147145|ENST00000614823|LPAR4'] 41920 18163 IDAYFQPCQD True H1975_Epitope_Rep2 1198.49647458286 1198.49536993586 75.279 2 -0.3910446609740728 0.10632517089210003 0.8605510697928818 ['nc|ENSG00000020219|A6NM43|CCT8L1P'] 29274 17555 FVALNYLTI True PC9_epitope_Rep1 1052.59063266788 1052.5895299358601 72.317 2 -0.39114348461011084 0.10635610085313306 0.8606557651462653 ['ENST00000345016.9_1_19:2101821-2102175:-|nuORF'] 74461 18513 NEVSIVFIP True NCI_RA007_Epitope_Rep5 1016.5542471591599 1016.55314993586 78.039 2 -0.39114736988312837 0.10635610085313306 0.8606598808276924 ['BIRC3|p.K563N|1|0.1|ENSG00000023445|chr11:102336976-102336976|A/T|missense_variant'] 45946 14461 ISELSGKVL True PC9_epitope_Rep5 944.5542471591599 944.55314993586 60.624 2 -0.39118160947958885 0.10636236222379873 0.8606961495038212 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-2|MTCL1'] 53608 12836 KRRSYYSYSYY True H1975_Epitope_Rep3 1534.72047762046 1534.7193899358601 54.593 2 -0.391187274517485 0.10636236222379873 0.8607021500110668 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF'] 56697 6852 LDKRRESK True NCI_RA007_Epitope_Rep4 1030.5883412520998 1030.5872499358602 32.977 2 -0.39120104107808046 0.10636236222379873 0.8607167315003506 ['ENST00000309964.8_1_4:56300945-56301062:-|nuORF'] 30497 6061 GAGEARNASPR True NCI_RA007_Epitope_Rep3 1084.5373683084 1084.5362699358602 30.824 2 -0.3912406933690269 0.10636236222379873 0.8607587287457391 ['ENST00000508458.2_1_5:41870176-41871044:+|nuORF'] 55773 18354 LAMLVGCYV True PC9_epitope_Rep4 967.4870961994699 967.48598993586 78.665 2 -0.391261800271711 0.10636236222379873 0.860781082470155 ['nc|ENSG00000029364|Q9NUM3-3|SLC39A9', 'nc|ENSG00000029364|Q9NUM3-2|SLC39A9', 'ENSG00000029364|ENST00000336643|SLC39A9', 'ENST00000554059.1_1_14:69866086-69895394:+|nuORF'] 16268 7162 EEEYQRVRERI True NCI_RA007_Epitope_Rep1 1505.7586540343298 1505.7570149037902 31.848 3 -0.3913112131686858 0.10636236222379873 0.86083341049074 ['nc|ENSG00000172995|Q9UBL0|ARPP21', 'ARPP21|p.Q739Sfs*41|1|0.27|ENSG00000172995|chr3:35793731-35793731|C/-|frameshift_variant', 'ENSG00000172995|ENST00000684406|ARPP21', 'ENST00000547019.1_1_12:57677830-57689202:-|nuORF', 'ENSG00000179912|ENST00000402412|R3HDM2'] 73783 17492 NAFSGVMML True H1975_Epitope_Rep2 968.44595966348 968.4454149679301 72.574 1 -0.39135460200693606 0.10637782468768384 0.8608793547059227 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ENST00000368287.1_1_6:127648134-127664493:-|nuORF', 'nc|ENSG00000093144|Q9NTX5|ECHDC1', 'ENSG00000093144|ENST00000454859|ECHDC1', 'nc|ENSG00000093144|Q9NTX5-6|ECHDC1', 'nc|ENSG00000093144|Q9NTX5-5|ECHDC1', 'ECHDC1|p.Q137Lfs*2|1|0.06|ENSG00000093144|chr6:127316456-127316474|AATCTTGTTAAGGTGTTTT/-|frameshift_variant'] 42741 15501 IELGWEVI True PC9_epitope_Rep6 957.5171333744499 957.51602993586 71.805 2 -0.3915090528828189 0.10648973165625703 0.8610428691250744 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant'] 112987 6364 TLLSQISTK True NCI_RA007_Epitope_Rep4 989.57571087973 989.5746099358599 31.083 2 -0.391532340715487 0.10648973165625703 0.8610675191285101 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 93994 15449 RRKKRRQR True NCI_RA007_Epitope_Rep3 1182.76462333498 1182.76352993586 68.325 2 -0.3915378916505211 0.10648973165625703 0.8610733945835654 ['nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant'] 96874 11169 SATENIPPPP True H1975_Epitope_Rep1 1021.5080252427299 1021.50692993586 47.93 2 -0.3915607051470415 0.10648973165625703 0.8610975411227446 ['ENSG00000177311|ENST00000321464|ZBTB38'] 129769 24740 VRRGKKRVK True NCI_RA007_Epitope_Rep1 1125.75707834305 1125.75657496793 102.43 1 -0.3915620013995171 0.10648973165625703 0.8610989130850369 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 33512 19762 GLDQSLVSL True PC9_epitope_Rep5 930.5022115863 930.50110993586 81.058 2 -0.3916053569254334 0.10653979238754326 0.8611447988201585 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 31345 7031 GDNVKNNKEN True NCI_RA007_Epitope_Rep2 1130.53161422162 1130.5305099358602 31.971 2 -0.39164751861780467 0.10656886320779198 0.8611894172543352 ['RASA2|p.E450K|1|0.29|ENSG00000155903|chr3:141573210-141573210|G/A|missense_variant'] 46252 16338 ISNWFDYI True PC9_epitope_Rep5 1056.4916469026 1056.4905499358601 67.841 2 -0.3916527723202609 0.10656886320779198 0.8611949768260311 ['ASB17|p.P275Qfs*8|1|0.1|ENSG00000154007|chr1:75919016-75919016|G/-|frameshift_variant', 'ENSG00000154007|ENST00000284142|ASB17'] 67268 8691 LSRRFQYR True PC9_epitope_Rep1 1124.6203100867199 1124.6186549037902 38.27 3 -0.39165799151905994 0.10656886320779198 0.8612004998279883 ['ENSG00000102174|ENST00000379374|PHEX'] 79323 13380 PARHSFPLTI True PC9_epitope_Rep4 1137.6294777880898 1137.62782490379 59.369 3 -0.3917072978040791 0.10658247556439754 0.8612526733589733 ['ENST00000249883.9_1_3:134076331-134076550:-|nuORF'] 83088 9553 PSNFPVEQP True PC9_epitope_Rep2 1013.4818104948899 1013.48070993586 42.091 2 -0.3917368943407734 0.10658247556439754 0.8612839885491356 ['ENST00000527517.1_1_11:812371-812833:+|nuORF'] 128257 6306 VPPFLKGVP True H1975_Epitope_Rep3 952.5745886809199 952.57348993586 29.261 2 -0.39177347025621856 0.10659793101062173 0.8613226858904277 ['ENST00000368321.7_1_1:155883759-155883837:-|nuORF'] 57970 8145 LEGSREGSLP True NCI_RA007_Epitope_Rep5 1043.52473793603 1043.52364993586 38.013 2 -0.3918048165452416 0.10661338592212016 0.8613558480772173 ['ENSG00000144655|ENST00000273153|CSRNP1'] 104107 8095 SQEEWEGLDTA True H1975_Epitope_Rep3 1263.5255257816698 1263.52442993586 36.111 2 -0.3918832912910932 0.1066442941410507 0.8614388599932449 ['ENST00000510553.1_1_20:25817387-25817465:-|nuORF', 'ENST00000376401.4_1_20:25999536-25999795:+|nuORF'] 101041 9665 SLGEGLITA True H1975_Epitope_Rep2 859.46509780159 859.46454496793 42.158 1 -0.3918861122228785 0.1066442941410507 0.8614418437869782 ['ENSG00000100401|ENST00000356244|RANGAP1'] 32971 11125 GIEDESVAL True H1975_Epitope_Rep3 931.4498416602698 931.44874993586 47.889 2 -0.39208956624486385 0.1067270934597222 0.8616570011557529 ['ENSG00000132702|ENST00000255039|HAPLN2'] 119392 8026 VAPRRGWV True PC9_epitope_Rep4 939.5402688608698 939.53916993586 38.321 2 -0.3920997126514149 0.1067270934597222 0.8616677290251809 ['ENST00000311417.6_1_3:178785505-178789764:-|nuORF'] 80696 11112 PGWQRARPLG True NCI_RA007_Epitope_Rep4 1136.6203100867199 1136.61920993586 49.618 2 -0.39213144116558446 0.10674254480038746 0.8617012744809182 ['ENST00000524189.5_1_8:28925998-28926520:-|nuORF'] 84350 13028 PYWKKRFLHMK True NCI_RA007_Epitope_Rep1 1532.8438447421197 1532.84218490379 54.669 3 -0.39216752198908267 0.1067561490296468 0.8617394190336862 ['ENST00000476943.1_1_13:49956911-49975339:-|nuORF'] 101601 5837 SLLQACSHDP True NCI_RA007_Epitope_Rep1 1069.48624425233 1069.4851499358601 26.759 2 -0.39219019466630484 0.1067561490296468 0.8617633871999674 ['nc|ENSG00000214575|Q9BZB8-4|CPEB1', 'nc|ENSG00000214575|Q9BZB8-2|CPEB1', 'nc|ENSG00000214575|Q9BZB8-3|CPEB1', 'nc|ENSG00000214575|Q9BZB8|CPEB1', 'ENSG00000214575|ENST00000684509|CPEB1'] 128823 10267 VQATEIHNI True PC9_epitope_Rep1 1023.5349086969098 1023.53380993586 44.377 2 -0.3922137699597632 0.10677159906598634 0.8617883084719608 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 17141 20098 EGPLGTVAVI True PC9_epitope_Rep3 954.5385970950199 954.5380449679301 82.558 1 -0.39221725645916367 0.10678520158430911 0.8617919939314999 ['ENSG00000174013|ENST00000311630|FBXO45'] 60631 11467 LHKDFESI True PC9_epitope_Rep5 987.50254593947 987.50144993586 49.105 2 -0.39223480879228484 0.10678520158430911 0.8618105475375614 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 44707 18407 ILVFPTSSTI True PC9_epitope_Rep2 1076.6117620352802 1076.6106699358602 76.132 2 -0.3922882807695686 0.10683524162025666 0.8618670660661817 ['ENSG00000123066|ENST00000281928|MED13L'] 47645 9927 IWFQNQRAKWR True PC9_epitope_Rep5 1531.8160497711497 1531.81441490379 43.156 3 -0.3923520010695295 0.10688343133863715 0.8619344094569364 ['ENSG00000175329|ENST00000404699|ISX'] 12356 7562 DIRPSRWYQFR True NCI_RA007_Epitope_Rep2 1522.7793299092598 1522.77769490379 34.039 3 -0.3923602834120674 0.10688343133863715 0.8619431621425869 ['ENSG00000011201|ENST00000262648|ANOS1'] 30875 7382 GAPQPPPPPP True PC9_epitope_Rep4 953.4970666362099 953.49596993586 35.735 2 -0.39239329800881717 0.10692976843124709 0.8619780502612805 ['ENSG00000205922|ENST00000382349|ONECUT3', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 40268 12611 HQLESILAM-[Oxidation] True PC9_epitope_Rep4 1056.5273811687598 1056.5262899358602 56.347 2 -0.3924031436550209 0.10692976843124709 0.8619884542193134 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 3239 6641 AGEVAKEWQEL True H1975_Epitope_Rep3 1258.6193665968597 1258.61826993586 30.499 2 -0.3924222326355602 0.10692976843124709 0.862008625130703 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF'] 27192 16523 FLLPRHHL True PC9_epitope_Rep6 1031.6028691174301 1031.6017699358601 75.992 2 -0.39252749703623924 0.1069433635970601 0.8621198430496587 ['ENST00000328914.4_1_7:4802311-4802611:+|nuORF'] 1872 11963 AEIEDPPIP True NCI_RA007_Epitope_Rep5 979.4862271689899 979.48512993586 52.671 2 -0.39256445569756077 0.1069433635970601 0.8621588869427674 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 136228 21093 WRTRSLLKRKT True NCI_RA007_Epitope_Rep2 1443.8786500277097 1443.87700490379 87.253 3 -0.39258767947708173 0.10695325874561207 0.8621834196833539 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 135273 9760 WFRMVLERRHF True H1975_Epitope_Rep3 1575.8245062798699 1575.82285490379 42.565 3 -0.392587956421368 0.10695325874561207 0.8621837122308156 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 106479 7184 STKYIIDP True H1975_Epitope_Rep2 935.4963979298699 935.49530993586 32.567 2 -0.3926861826185651 0.10695325874561207 0.8622874633232077 ['ENSG00000163788|ENST00000296088|SNRK'] 133509 20004 VWKRWKKRYFV True PC9_epitope_Rep6 1594.9248719441398 1594.92376993586 89.611 2 -0.3927307810309805 0.10695325874561207 0.8623345642098377 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 113717 11458 TLYRRRLYRE True NCI_RA007_Epitope_Rep2 1424.80006535384 1424.7989699358602 49.162 2 -0.39291466145118836 0.1070205775549023 0.862528723029029 ['ENST00000548759.1_1_12:113495266-113495848:+|nuORF'] 12388 8831 DISRAQAAL True PC9_epitope_Rep1 943.5086939490698 943.50758993586 38.81 2 -0.39293390990290056 0.10705331050820494 0.8625490437833582 ['ENST00000580183.6_3_17:27899065-27899242:+|nuORF', 'ENST00000579674.1_1_17:27899137-27899242:+|nuORF'] 94806 4513 RSPSILAAK True NCI_RA007_Epitope_Rep4 941.5658149023699 941.56470993586 23.752 2 -0.3929479271150285 0.10706689952103471 0.8625638414437502 ['nc|ENSG00000144331|Q569K4-3|ZNF385B', 'nc|ENSG00000144331|Q569K4-2|ZNF385B', 'nc|ENSG00000144331|Q569K4|ZNF385B', 'ENSG00000144331|ENST00000410066|ZNF385B'] 28341 4255 FRSRMWKWRPR True NCI_RA007_Epitope_Rep5 1604.8622887709198 1604.86009987172 22.933 4 -0.3929669156494009 0.10706689952103471 0.8625838866423626 ['ENST00000359013.4_1_3:30648217-30664756:+|nuORF'] 33051 20811 GILGNGLVI True PC9_epitope_Rep4 854.5225531080599 854.52200496793 88.2 1 -0.39304396625824106 0.1070823391084829 0.8626652181433404 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 36292 15438 GVEDLVFWVP True H1975_Epitope_Rep2 1159.5913609438699 1159.59026993586 64.539 2 -0.39308531284218534 0.10711321668165157 0.8627088574587076 ['chr7:65940167-65948671|129|14.83|0.51|4.88|+|2|TE_info:AluJr,AluJr_dup31264,Alu,SINE,donor,-,65940017,65940167|None,VKORC1L1|2'] 118939 5596 VADSGLTLK True NCI_RA007_Epitope_Rep5 902.50729696674 902.50618993586 28.214 2 -0.39310032978483855 0.10711321668165157 0.862724706345827 ['nc|ENSG00000126858|Q8IXI2-4|RHOT1', 'nc|ENSG00000126858|Q8IXI2|RHOT1', 'nc|ENSG00000126858|Q8IXI2-5|RHOT1', 'nc|ENSG00000126858|Q8IXI2-2|RHOT1', 'ENSG00000126858|ENST00000545287|RHOT1', 'nc|ENSG00000126858|Q8IXI2-3|RHOT1'] 27488 10722 FMELGHTP True H1975_Epitope_Rep1 930.42693847106 930.42584993586 46.204 2 -0.3931229854252139 0.10712865466742742 0.8627486163452821 ['ENST00000369485.8_1_6:89321642-89321729:-|nuORF'] 82820 17574 PRRWWRWCWQP True NCI_RA007_Epitope_Rep2 1655.8044395416298 1655.80334993586 73.1 2 -0.3931775079873467 0.10714409211936789 0.8628061538258089 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 71967 4345 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 21.83 2 -0.3932229431449413 0.10715767634854771 0.8628540973214034 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 56518 6460 LDFQVVVL True NCI_RA007_Epitope_Rep2 931.5378688190299 931.53676993586 29.738 2 -0.39323110370963826 0.10715767634854771 0.8628627080152154 ['ENSG00000182179|ENST00000333486|UBA7'] 66702 9434 LSLEDRIQ True PC9_epitope_Rep4 972.5240096600398 972.52290993586 43.9 2 -0.39332266671695687 0.10722127137250834 0.8629593134323558 ['nc|ENSG00000151612|Q17R98-2|ZNF827', 'ENSG00000151612|ENST00000508784|ZNF827', 'ZNF827|p.M235Dfs*30|1|0.26|ENSG00000151612|chr4:145902553-145902556|GCAT/-|frameshift_variant'] 129773 23248 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75657496793 102.52 1 -0.3933347884785576 0.10722127137250834 0.8629721016309697 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 97006 3509 SCCCCCCC True PC9_epitope_Rep6 826.10688658094 826.10578993586 19.702 2 -0.3933420293801796 0.10722127137250834 0.8629797405032992 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 75546 13034 NKYWEAGFF True PC9_epitope_Rep5 1160.52909504048 1160.52745490379 55.139 3 -0.39353660555946973 0.10730585713297836 0.8631849765251244 ['ENST00000360325.11_1_17:7163361-7163544:-|nuORF'] 113878 5743 TNPNHIYL True PC9_epitope_Rep5 970.4872302285 970.48612993586 27.083 2 -0.3935758134233472 0.10731943436019777 0.8632263244435082 ['ENST00000309534.10_1_3:88105110-88107183:-|nuORF'] 13791 13685 DQILTALA True H1975_Epitope_Rep3 843.4701831820299 843.46963496793 57.934 1 -0.39358509260709984 0.10731943436019777 0.863236109719858 ['ENSG00000226761|ENST00000533467|TAS2R46', 'ENSG00000212126|ENST00000506868|TAS2R50', 'ENSG00000256436|ENST00000390675|TAS2R31', 'ENSG00000255374|ENST00000531678|TAS2R43', 'ENSG00000256188|ENST00000539585|TAS2R30'] 56325 5947 LDCAHTAASF True PC9_epitope_Rep6 1034.44913046762 1034.4480299358602 31.173 2 -0.3937307627371832 0.10736944007467976 0.8633897055528827 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 59128 21875 LEYQRRQVREP True PC9_epitope_Rep3 1472.78480921252 1472.78370993586 89.445 2 -0.39374982110746176 0.1073848706956161 0.8634097982039632 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 136971 7224 YAHPSGTAL True PC9_epitope_Rep5 915.4450310633499 915.44392993586 32.751 2 -0.39378101785878816 0.10739844425237684 0.8634426866581557 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'AFAP1|p.G490V|1|0.32|ENSG00000196526|chr4:7786255-7786255|C/A|missense_variant'] 81075 6517 PISKNQSDP True NCI_RA007_Epitope_Rep1 984.48762415132 984.48652993586 29.364 2 -0.3938205550232305 0.10739844425237684 0.8634843654590885 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'ENST00000344391.9_1_19:43023094-43025421:-|nuORF', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF'] 30455 18635 GAFPILTDLT True PC9_epitope_Rep5 1046.5648118428599 1046.56370993586 76.706 2 -0.39389937659589824 0.10741387357176194 0.8635674488503019 ['nc|ENSG00000163703|Q96HD1-2|CRELD1'] 83660 21444 PVELGTVAEL True PC9_epitope_Rep4 1026.5597264624198 1026.5586299358602 90.665 2 -0.39396697082190285 0.10744658784484547 0.8636386896668341 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 124696 8818 VGYRVATF True NCI_RA007_Epitope_Rep3 911.4865019525099 911.48540993586 41.778 2 -0.39402370378062407 0.10746201579866213 0.863698477491329 ['ENSG00000179085|ENST00000368400|DPM3', 'nc|ENSG00000179085|Q9P2X0-2|DPM3'] 63227 9803 LLSGALVS True H1975_Epitope_Rep1 758.4538048419 758.4532549679301 42.635 1 -0.3940766523499425 0.10749472810868739 0.8637542724272455 ['ENSG00000160190|ENST00000352133|SLC37A1', 'ENST00000496416.1_1_21:43985963-43995993:+|nuORF'] 142253 11325 YWRRDLERALY True H1975_Epitope_Rep3 1539.7946456202299 1539.79300490379 48.67 3 -0.3941103597836254 0.10751015469708755 0.8637897895162423 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 66191 13361 LSERSTIDL True PC9_epitope_Rep2 1032.54513902744 1032.5440499358601 56.669 2 -0.39415381412119826 0.10752558075221239 0.8638355740957617 ['SCN11A|p.C994R|1|0.42|ENSG00000168356|chr3:38885372-38885372|A/G|missense_variant'] 46071 9622 ISGTGSNLQAL True PC9_epitope_Rep1 1059.55603806431 1059.5549499358601 41.866 2 -0.3942350669370887 0.107592858253971 0.863921176003784 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 71058 17296 LYKNLEIIDLY True H1975_Epitope_Rep2 1395.7649682013898 1395.7638699358602 71.822 2 -0.39426189965158515 0.10760828234643438 0.8639494426483255 ['ENST00000573577.5_1_17:5336118-5336172:+|nuORF'] 67903 13908 LTCIAFVMP True H1975_Epitope_Rep2 993.50274626361 993.50164993586 58.644 2 -0.3943083696587488 0.10764098930157798 0.8639983933080231 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1', 'ENST00000492943.1_1_1:100177041-100181213:-|nuORF'] 56287 9166 LDAFYSSIIVP True H1975_Epitope_Rep1 1223.64379043955 1223.64268993586 40.162 2 -0.3944714864406104 0.10772182088417269 0.864170190859066 ['ENSG00000198678|ENST00000328207|OR5BS1P'] 58394 10526 LENQGLEAVQ True H1975_Epitope_Rep3 1099.5509526838698 1099.54984993586 45.554 2 -0.3944892494997482 0.10772182088417269 0.8641888967500783 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 46975 8414 ITPRLCLK True NCI_RA007_Epitope_Rep1 942.5684577546599 942.56736993586 36.732 2 -0.39449279699740486 0.10772182088417269 0.8641926324846569 ['ENST00000597277.1_9:43426178-43426727:-|nuORF'] 62830 27735 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 115.23 3 -0.3944964965904387 0.10772979418321323 0.8641965283645324 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 102884 6414 SPAKLQAAAT True NCI_RA007_Epitope_Rep4 956.5290950404799 956.52798993586 31.272 2 -0.3944993314544787 0.10772979418321323 0.8641995136218735 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 17521 7258 EHFRKPVP True H1975_Epitope_Rep2 1008.5504991913998 1008.54940993586 32.852 2 -0.3945224649066975 0.10772979418321323 0.8642238738748398 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'ENST00000495539.5_1_10:114169305-114171667:+|nuORF'] 112425 11871 TLDAQDVLA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 50.74 1 -0.39456365582116354 0.10772979418321323 0.8642672471824501 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 101067 19571 SLGFEQLSL True PC9_epitope_Rep1 992.51786165044 992.51676993586 80.105 2 -0.39457132276853085 0.10772979418321323 0.8642753200581696 ['ENSG00000187714|ENST00000374115|SLC18A3'] 119083 17767 VAGPDSPLLP True PC9_epitope_Rep1 964.5229470308799 964.52184993586 73.138 2 -0.3946098596513106 0.10774335136256026 0.8643158959365627 ['ENST00000508789.5_2_3:126676279-126676333:+|nuORF'] 3551 8057 AGLTQSIPIL True NCI_RA007_Epitope_Rep4 1011.5964463243098 1011.59534993586 37.766 2 -0.3946236539755347 0.10774335136256026 0.8643304195763605 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 105768 11268 SSGSVLAGQV True PC9_epitope_Rep1 903.4661604307499 903.46506993586 48.223 2 -0.3946603308610231 0.1077587696561258 0.8643690342013629 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 23070 19861 EVIFFVFIFYY True PC9_epitope_Rep1 1485.75842626897 1485.75732993586 81.211 2 -0.39468243189717 0.1077741874168409 0.8643923019208255 ['PKD2L1|p.C360F|1|0.3|ENSG00000107593|chr10:100297086-100297086|C/A|missense_variant'] 48746 2606 KDFRRECRDER True NCI_RA007_Epitope_Rep5 1508.7266427133998 1508.72500490379 14.732 3 -0.3948372781894549 0.10782416367155101 0.864555301977522 ['ENSG00000172409|ENST00000533682|CLP1', 'nc|ENSG00000172409|Q92989-2|CLP1'] 46823 8462 ITHYEGSTCPK True NCI_RA007_Epitope_Rep1 1234.56522284902 1234.5635849037901 36.915 3 -0.3949069278484741 0.10785685898432776 0.8646286076997393 ['ENSG00000261701|ENST00000540303|HPR', 'nc|ENSG00000261701|P00739-2|HPR'] 8791 9732 AVDPSGLAA True PC9_epitope_Rep3 799.4075829254699 799.40648993586 42.387 2 -0.3949515177616026 0.10788768898488121 0.8646755345378226 ['DEPTOR|p.P360L|1|0.45|ENSG00000155792|chr8:120009111-120009111|C/T|missense_variant'] 100506 15525 SLARHAGQCL True PC9_epitope_Rep5 1054.5341975042597 1054.53310993586 64.726 2 -0.3949896020245855 0.10788768898488121 0.8647156125000629 ['ENST00000274026.9_1_4:122744785-122745025:-|nuORF'] 128119 18707 VPLLGGLL True H1975_Epitope_Rep2 780.5109257952 780.51037496793 77.656 1 -0.39505871007714394 0.10790310318612205 0.8647883330359887 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant', 'HERC2|p.A1157G|1|0.12|ENSG00000128731|chr15:28245988-28245988|G/C|missense_variant'] 49175 6422 KELSSSLHQK True NCI_RA007_Epitope_Rep5 1155.62478633047 1155.62368993586 31.372 2 -0.39508817754769054 0.10793579487533908 0.8648193387932276 ['nc|ENSG00000072571|O75330-4|HMMR', 'HMMR|p.K666Nfs*11|1|0.43|ENSG00000072571|chr5:163490420-163490420|A/-|frameshift_variant', 'nc|ENSG00000072571|O75330-2|HMMR', 'nc|ENSG00000072571|O75330|HMMR', 'ENSG00000072571|ENST00000393915|HMMR'] 136227 20894 WRTRSLLKRKT True H1975_Epitope_Rep1 1443.8786500277097 1443.87700490379 86.812 3 -0.39512861513058817 0.10796662001762297 0.8648618853372011 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 53702 11213 KSGLFTGGSL True PC9_epitope_Rep2 965.5181960036099 965.51708993586 48.459 2 -0.39522443911251764 0.10796662001762297 0.8649626977221287 ['ENSG00000197629|ENST00000361050|MPEG1'] 62831 27799 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 115.57 3 -0.3952944400784692 0.10798203178991016 0.8650363347407347 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 17745 11148 EHRKDLGL True PC9_epitope_Rep4 966.5246783663798 966.52358993586 50.66 2 -0.39534314195050085 0.10798624907146682 0.8650875623580886 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'nc|ENSG00000101624|Q8TAP6-2|CEP76'] 136229 20166 WRTRSLLKRKT True NCI_RA007_Epitope_Rep4 1443.8786500277097 1443.87700490379 87.26 3 -0.3953448995284096 0.10798624907146682 0.86508941102582 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 30693 14068 GALEPHINAQI True PC9_epitope_Rep2 1161.61422164677 1161.6131299358601 59.389 2 -0.39536560180162433 0.10798624907146682 0.8651111859173839 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 92076 4868 RKVNPAAAL True NCI_RA007_Epitope_Rep4 938.5661492555398 938.56504993586 25.172 2 -0.3954004339298621 0.10798624907146682 0.8651478214421237 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'UTP14A|p.R659Kfs*9|1|0.2|ENSG00000156697|chrX:129926272-129926272|G/-|frameshift_variant'] 55602 4977 LAIDDIHFDD True NCI_RA007_Epitope_Rep1 1172.53496826656 1172.5338699358601 23.442 2 -0.3954812810098369 0.10798624907146682 0.8652328479906938 ['ENSG00000128655|ENST00000286063|PDE11A', 'nc|ENSG00000128655|Q9HCR9-4|PDE11A', 'nc|ENSG00000128655|Q9HCR9-3|PDE11A', 'nc|ENSG00000128655|Q9HCR9-2|PDE11A', 'ENST00000497003.5_1_2:178552959-178791632:-|nuORF'] 83539 23482 PTVFAFSP True H1975_Epitope_Rep1 864.4381547777599 864.43760496793 97.575 1 -0.3955030380733643 0.10798624907146682 0.8652557283125328 ['nc|ENSG00000172728|Q6P4F1-6|FUT10', 'ENSG00000172728|ENST00000327671|FUT10', 'nc|ENSG00000172728|Q6P4F1-2|FUT10', 'ENST00000517891.1_1_8:33230097-33235056:-|nuORF', 'ENST00000519440.5_1_8:33229659-33235056:-|nuORF', 'ENST00000517942.1_1_8:33229659-33246696:-|nuORF'] 17107 18983 EGLRVLTQL True PC9_epitope_Rep4 1027.60259433391 1027.6014899358602 81.11 2 -0.39550329314976074 0.10798624907146682 0.8652559965540942 ['ENSG00000186526|ENST00000612078|CYP4F8'] 103247 13330 SPLHLAVEA True PC9_epitope_Rep2 935.5076313199099 935.50652993586 56.546 2 -0.39556661995199494 0.10803620784964069 0.8653225891496312 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 40280 6425 HQLHLQQQL True NCI_RA007_Epitope_Rep4 1143.61489035311 1143.61378993586 31.314 2 -0.39557208708122066 0.10804415041542155 0.8653283379727932 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 110886 11767 TGSRPVVL True PC9_epitope_Rep1 827.4865019525099 827.48540993586 50.134 2 -0.39557342236531057 0.10804415041542155 0.8653297420514405 ['ENSG00000173239|ENST00000404743|LIPM', 'nc|ENSG00000173239|Q5VYY2-2|LIPM'] 99648 9331 SIFTSFLD True NCI_RA007_Epitope_Rep5 928.45419876472 928.45310993586 42.534 2 -0.3955882795527651 0.10804415041542155 0.8653453645309913 ['ENSG00000018510|ENST00000264167|AGPS'] 120597 16360 VEHLFLYLQRE True H1975_Epitope_Rep1 1445.7666995368897 1445.76560993586 68.289 2 -0.39562070039296393 0.10804415041542155 0.8653794543595017 ['ENST00000425348.1_1_X:53483765-53483951:-|nuORF'] 90738 4401 RERLEQQVP True NCI_RA007_Epitope_Rep5 1153.62036965637 1153.61926993586 23.559 2 -0.39562094757845995 0.10804415041542155 0.8653797142645435 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 79285 2654 PAPRVVAAA True PC9_epitope_Rep2 850.5024863698198 850.50138993586 14.862 2 -0.3956565780614052 0.10805955712163609 0.8654171773690854 ['ENST00000215829.7_1_22:24951748-24951973:+|nuORF'] 16853 8353 EFEDEEKSP True H1975_Epitope_Rep1 1108.4560492395199 1108.4549499358602 37.059 2 -0.39573281460463555 0.10809036893740501 0.8654973295397802 ['CEP290|p.E2471K|1|0.08|ENSG00000198707|chr12:88049213-88049213|C/T|missense_variant'] 7751 8832 ASQNYRRV True NCI_RA007_Epitope_Rep2 992.5151763118398 992.51406993586 39.004 2 -0.3957803522934464 0.10809036893740501 0.8655473050543477 ['ENST00000545225.5_2_17:40994722-40994797:+|nuORF'] 62842 26791 LLMCEIPMVEL True NCI_RA007_Epitope_Rep4 1289.6433391406897 1289.64169490379 118.48 3 -0.3958302534675425 0.10812911248121859 0.8655997621597553 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 118730 23140 TYVFNIIF True PC9_epitope_Rep5 1015.5378688190299 1015.53676993586 93.996 2 -0.3958735340731261 0.10812911248121859 0.865645257040982 ['ENSG00000121743|ENST00000241125|GJA3'] 110895 9757 TGVAVMERRSC True PC9_epitope_Rep5 1207.58016172051 1207.57852490379 42.5 3 -0.39587422334152533 0.10812911248121859 0.865645981553912 ['ENST00000496978.5_1_4:154125656-154143413:+|nuORF'] 61032 10971 LIEWRQRK True NCI_RA007_Epitope_Rep1 1127.65636124227 1127.6552699358601 46.668 2 -0.39589830234633033 0.10812911248121859 0.865671291422386 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 89198 9237 QVSQIYQSI True PC9_epitope_Rep5 1064.55022440788 1064.54912993586 40.478 2 -0.395911334751801 0.10812911248121859 0.8656849897119311 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF', 'ENST00000462527.2_1_10:120819077-120819266:-|nuORF'] 64251 13386 LPHGFTNMA True PC9_epitope_Rep1 986.4643866089401 986.46328993586 56.35 2 -0.3959486302225098 0.10812911248121859 0.8657241896055462 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 20485 18502 EPLGPRFWWP True PC9_epitope_Rep3 1283.64512785223 1283.64349490379 76.385 3 -0.39595193007796975 0.10812911248121859 0.8657276578786414 ['ENST00000513775.1_1_4:44680541-44682717:+|nuORF'] 37705 9586 GVYNGKTFNQV True PC9_epitope_Rep6 1225.60913626633 1225.60802993586 47.179 2 -0.39601145711916014 0.10815618146338093 0.8657902207419609 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 128079 11381 VPLC[Carbamidomethyl]ILYEK True H1975_Epitope_Rep1 1133.61546779616 1133.6143699358602 48.755 2 -0.3960129661212285 0.10815618146338093 0.8657918066449509 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 46732 8478 ITEKTEDSSV True NCI_RA007_Epitope_Rep3 1107.52954853295 1107.5284499358602 40.425 2 -0.39603664285306744 0.10815618146338093 0.865816689611531 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1'] 84744 8931 QDSSATEHWP True H1975_Epitope_Rep3 1156.4785160196 1156.4774099358601 39.35 2 -0.39603717046059606 0.10815618146338093 0.8658172440907321 ['ENST00000511828.1_1_4:100575555-100575762:-|nuORF'] 94762 11638 RSKTDLDCIF True PC9_epitope_Rep1 1196.5859582935998 1196.58430490379 49.645 3 -0.3961520174810306 0.10820238300811605 0.8659379323532468 ['ENSG00000254093|ENST00000314787|PINX1', 'ENST00000524061.1_1_8:10645233-10677771:-|nuORF'] 91786 25350 RKGKKKKRWH True PC9_epitope_Rep5 1350.8472903297798 1350.8461899358601 102.72 2 -0.3961871087100547 0.10820238300811605 0.8659748051889691 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 5115 10697 ALLKQIQEA True PC9_epitope_Rep4 1012.5916952970399 1012.59058993586 48.898 2 -0.3961893106550591 0.10820238300811605 0.8659771188792244 ['ENST00000484795.5_1_12:6761826-6762560:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-8|ING4', 'ENST00000488381.5_1_12:6760363-6764813:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-3|ING4', 'nc|ENSG00000111653|Q9UNL4-4|ING4', 'nc|ENSG00000111653|Q9UNL4-7|ING4', 'nc|ENSG00000111653|Q9UNL4-5|ING4', 'nc|ENSG00000111653|Q9UNL4-6|ING4', 'ENSG00000111653|ENST00000341550|ING4', 'nc|ENSG00000111653|Q9UNL4|ING4'] 18176 11594 EILAEELCTPP True H1975_Epitope_Rep1 1213.59004061453 1213.58894993586 49.585 2 -0.39620066417400174 0.10821591380024866 0.8659890484797164 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF'] 12856 5109 DLGYMYFYRRI True H1975_Epitope_Rep1 1495.7282058531898 1495.72654490379 24.721 3 -0.3962251853072407 0.10821591380024866 0.8660148133008343 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13'] 83620 10675 PVDNLVIK True H1975_Epitope_Rep1 896.53311779176 896.53256496793 46.02 1 -0.3964121524067911 0.1082812446040681 0.8662112399736931 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 9244 16051 AVPEEGLAQV True PC9_epitope_Rep5 1011.5236753068697 1011.52256993586 66.728 2 -0.3964149609877314 0.1082812446040681 0.8662141903452897 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'nc|ENSG00000182095|O15417-4|TNRC18'] 118477 20933 TYPNTYIF True PC9_epitope_Rep5 1017.48074786573 1017.4801749679301 85.576 1 -0.39645821221364297 0.10831390831390832 0.8662596239603828 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 69193 12974 LTSGIDSSTL True PC9_epitope_Rep4 992.5026055091201 992.50150993586 57.799 2 -0.396541119633161 0.10836196626206468 0.8663467087896021 ['ENSG00000171940|ENST00000371471|ZNF217'] 34474 10412 GPLEHPLHDP True H1975_Epitope_Rep2 1110.5458077337798 1110.54470993586 45.064 2 -0.39655222453586464 0.10836196626206468 0.8663583726348812 ['ENST00000337478.2_1_10:106075471-106098072:-|nuORF'] 142202 4924 YVWKRVFQRYE True H1975_Epitope_Rep3 1572.8201320920796 1572.81847490379 24.066 3 -0.3965677252789334 0.10839462688628751 0.8663746533421242 ['ENSG00000139133|ENST00000266483|ALG10'] 12403 15853 DITKEEADVI True PC9_epitope_Rep3 1131.5659340416698 1131.5648299358602 66.129 2 -0.3965976929100177 0.10841002089124467 0.8664061281079192 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 85479 7303 QFLYMCMDLK True H1975_Epitope_Rep1 1290.5810732373 1290.5799699358602 33.103 2 -0.39663233485777877 0.10843331894691412 0.8664425110052985 ['FAM83D|p.D204Y|1|0.11|ENSG00000101447|chr20:38942085-38942085|G/T|missense_variant'] 134149 13118 VYLISPDTK True PC9_epitope_Rep2 1034.5648118428599 1034.56370993586 55.733 2 -0.39667447939669487 0.10843331894691412 0.8664867717142128 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'TBC1D1|p.P709Hfs*44|1|0.41|ENSG00000065882|chr4:38090002-38090002|C/-|frameshift_variant', 'ENST00000491553.1_1_4:38016582-38022367:+|nuORF'] 116599 5078 TVADKIHSV True PC9_epitope_Rep4 968.52909504048 968.52798993586 26.183 2 -0.3967047541149727 0.10843331894691412 0.8665185653583583 ['ENSG00000276023|ENST00000617516|DUSP14'] 17210 10308 EGVANGIEVY True H1975_Epitope_Rep3 1049.5029398622898 1049.5023749679299 44.703 1 -0.3967119243091978 0.10843331894691412 0.8665260951405923 ['nc|ENSG00000162267|Q06033-2|ITIH3', 'ENSG00000162267|ENST00000449956|ITIH3'] 120495 15415 VEFASYGDL True PC9_epitope_Rep4 999.4549270407099 999.45382993586 67.226 2 -0.39671281378690526 0.10843331894691412 0.866527029221925 ['nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5', 'ENST00000554465.5_1_14:70237039-70238175:+|nuORF', 'ENST00000554929.1_1_14:70237619-70238175:+|nuORF'] 62843 26858 LLMCEIPMVEL True NCI_RA007_Epitope_Rep4 1289.6433391406897 1289.64169490379 118.86 3 -0.39672207266004716 0.10843331894691412 0.8665367523364957 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 84133 22171 PYAVLLEAL True PC9_epitope_Rep1 987.5640835668698 987.56298993586 90.098 2 -0.39677421474526964 0.10846410136896438 0.8665915070401928 ['ENSG00000111652|ENST00000543155|COPS7A'] 101377 8030 SLKDITNVS True PC9_epitope_Rep4 975.5236753068701 975.52256993586 38.338 2 -0.396779048924611 0.10846410136896438 0.8665965832856041 ['nc|ENSG00000129810|Q5FBB7-4|SGO1', 'nc|ENSG00000129810|Q5FBB7-2|SGO1', 'nc|ENSG00000129810|Q5FBB7-5|SGO1', 'nc|ENSG00000129810|Q5FBB7-3|SGO1', 'ENSG00000129810|ENST00000412997|SGO1', 'nc|ENSG00000129810|Q5FBB7|SGO1'] 33467 20525 GLASIQVVDI True PC9_epitope_Rep1 1013.57571087973 1013.5746099358599 83.761 2 -0.3968244380314362 0.10848926327418353 0.8666442439280593 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 48897 19392 KEDKLFRKKRR True PC9_epitope_Rep4 1502.9157638124195 1502.91412490379 82.701 3 -0.39685793478180026 0.10848926327418353 0.8666794155788468 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B'] 65636 5507 LSAGKVQG True NCI_RA007_Epitope_Rep4 758.42865272322 758.42754993586 27.774 2 -0.3968608434068454 0.10848926327418353 0.8666824695817174 ['ENSG00000218336|ENST00000511685|TENM3'] 53182 7838 KQDLPNAM True PC9_epitope_Rep5 915.44840219163 915.44730993586 35.093 2 -0.3969091221146789 0.10848926327418353 0.866733159966484 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 121601 23523 VFFLIVVICK True H1975_Epitope_Rep3 1179.70897397875 1179.70732490379 98.157 3 -0.3969492566468625 0.10848926327418353 0.8667752973824456 ['ENSG00000134294|ENST00000256689|SLC38A2', 'nc|ENSG00000134294|Q96QD8-2|SLC38A2'] 5795 16656 APDSKHTFLAA True PC9_epitope_Rep5 1156.5876725457601 1156.58656993586 69.073 2 -0.39706084352465126 0.10849903341618337 0.8668924435864541 ['ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-4|GREB1'] 2684 6671 AESRWRRILG True H1975_Epitope_Rep2 1242.6945376561398 1242.6928949037901 30.569 3 -0.3970627573782711 0.10849903341618337 0.8668944526701047 ['ITGA2B|p.R239Pfs*140|1|0.25|ENSG00000005961|chr17:44385031-44385031|C/-|frameshift_variant'] 238 12321 AAGAGGLLWL True H1975_Epitope_Rep3 927.51780208079 927.51670993586 52.575 2 -0.39708380768405693 0.10849903341618337 0.8669165501378342 ['ENST00000207636.9_1_22:19950294-19951640:+|nuORF', 'ENST00000403710.5_1_22:19950294-19951749:+|nuORF'] 131985 6240 VTSKERFLKSF True NCI_RA007_Epitope_Rep5 1340.7452358163198 1340.7436049037901 30.678 3 -0.3971143752407969 0.10849903341618337 0.8669486374358306 ['ENSG00000139547|ENST00000398138|RDH16'] 56452 4973 LDELEQKQ True H1975_Epitope_Rep3 1001.5029398622898 1001.50184993586 24.256 2 -0.3972048903085733 0.10851442083642578 0.8670436467092174 ['ENSG00000101407|ENST00000373447|TTI1'] 39821 15297 HNHYTQKSL True PC9_epitope_Rep3 1126.5519557433802 1126.5503249037902 63.992 3 -0.39726168275307244 0.1085624536150089 0.8671032544411105 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1'] 88217 5894 QSALSIAKEK True NCI_RA007_Epitope_Rep5 1073.6080736371698 1073.6069699358602 29.358 2 -0.397269256802706 0.1085624536150089 0.86711120368422 ['TET3|p.K1103Rfs*79|1|0.42|ENSG00000187605|chr2:74099315-74099315|A/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3'] 140221 13335 YQVRNWLI True PC9_epitope_Rep1 1090.59236400338 1090.59126993586 56.151 2 -0.3973618844981649 0.10861235761132206 0.8672084148505614 ['ENST00000279488.7_1_12:89742839-89743004:-|nuORF'] 8454 5973 ATPTARSYVAP True NCI_RA007_Epitope_Rep3 1132.58767254576 1132.58602490379 30.477 3 -0.3974149807206929 0.10863937594919232 0.8672641342659622 ['IGFLR1|p.P72Rfs*26|1|0.14|ENSG00000126246|chr19:35740507-35740507|G/-|frameshift_variant'] 101652 13329 SLLSRTQVP True PC9_epitope_Rep1 999.5712942056299 999.57018993586 56.129 2 -0.3974531848611386 0.10863937594919232 0.8673042239993743 ['ENSG00000138658|ENST00000505019|ZGRF1', 'ZGRF1|p.A1401Lfs*7|1|0.1|ENSG00000138658|chr4:112584076-112584076|T/-|frameshift_variant', 'ENST00000473015.5_1_4:113483525-113509083:-|nuORF'] 140629 22525 YRRRLWKWWKS True NCI_RA007_Epitope_Rep2 1663.9211835460299 1663.92008993586 93.676 2 -0.39745736751223937 0.10863937594919232 0.8673086129937256 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 102416 7523 SLTLSAPS True NCI_RA007_Epitope_Rep3 774.41233395274 774.41122993586 36.714 2 -0.39747907406636956 0.10863937594919232 0.8673313901008753 ['ENSG00000159433|ENST00000290607|STARD9'] 42028 4200 IDHLEQEKQIK True NCI_RA007_Epitope_Rep4 1379.74087871187 1379.73922490379 22.463 3 -0.39759775841368905 0.10865100868034583 0.8674559190442747 ['ENSG00000119684|ENST00000355774|MLH3', 'nc|ENSG00000119684|Q9UHC1-2|MLH3', 'ENST00000555415.1_1_14:75483787-75485735:-|nuORF'] 14793 8053 DVQAKDLGPNY True H1975_Epitope_Rep3 1218.5880664685799 1218.58696993586 35.95 2 -0.3976229832820802 0.10865100868034583 0.8674823841904754 ['PCDH19|p.S325Y|1|0.07|ENSG00000165194|chrX:100407624-100407624|G/T|missense_variant'] 91730 6076 RKEDNDEI True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 30.375 2 -0.39762864662363695 0.10865100868034583 0.8674883258999575 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 12798 18085 DLFGVKGG True PC9_epitope_Rep3 791.4177536863499 791.41664993586 74.762 2 -0.39769310472815667 0.10865514028367326 0.8675559499140078 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 60421 10213 LGVETKRWLSG True PC9_epitope_Rep5 1244.6877209401998 1244.68606490379 44.272 3 -0.39769934190415396 0.10865514028367326 0.8675624932026068 ['nc|ENSG00000134759|Q6IA86-4|ELP2'] 62833 27991 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 116.6 3 -0.3977117394686792 0.10865514028367326 0.8675754991028664 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 38329 10134 HEHEELSL True PC9_epitope_Rep5 992.4563240230399 992.45522993586 43.965 2 -0.39772021952689657 0.10865514028367326 0.8675843951762734 ['ENSG00000216937|ENST00000639629|CCDC7', 'nc|ENSG00000216937|Q96M83-2|CCDC7', 'nc|ENSG00000216937|Q96M83-4|CCDC7', 'nc|ENSG00000216937|Q96M83-3|CCDC7', 'nc|ENSG00000216937|Q96M83-5|CCDC7'] 86495 25170 QKVWKRWKKRY True PC9_epitope_Rep6 1604.9415846374395 1604.9399249037901 111.99 3 -0.3977839697903615 0.10865514028367326 0.8676512705020301 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 125715 22901 VKRKRTKGKK True PC9_epitope_Rep3 1227.82515790287 1227.82406993586 93.356 2 -0.3978508729330388 0.10865514028367326 0.8677214487186637 ['nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 58359 5593 LENGEIETIAR True NCI_RA007_Epitope_Rep2 1243.64083031743 1243.63918490379 26.37 3 -0.3978548559522465 0.10865514028367326 0.8677256265702223 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 38616 13897 HFEVAELL True PC9_epitope_Rep4 956.4967322830398 956.49562993586 61.355 2 -0.39787201696373026 0.10866677019169384 0.867743626837797 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'ENST00000497613.2_1_8:145658938-145666334:-|nuORF'] 55125 6297 LAADPSHP True NCI_RA007_Epitope_Rep3 806.3922672145 806.39116993586 31.771 2 -0.3978926084166141 0.10866677019169384 0.8677652249104517 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 55631 9906 LAKAINQIAA True PC9_epitope_Rep6 1011.6076797143498 1011.60658993586 48.613 2 -0.39791565930416306 0.10866677019169384 0.8677894021293406 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 110893 13731 TGTLVITDP True NCI_RA007_Epitope_Rep1 915.49131254943 915.4907649679301 57.426 1 -0.39795604463517187 0.1086783988957902 0.8678317594833583 ['ENSG00000018236|ENST00000551295|CNTN1', 'nc|ENSG00000018236|Q12860-2|CNTN1', 'nc|ENSG00000018236|Q12860-3|CNTN1'] 8986 17933 AVGLHAAVTL True PC9_epitope_Rep1 950.5549158655 950.55380993586 73.77 2 -0.39795906834679495 0.1086783988957902 0.8678349307759475 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 116907 8842 TVFPETVP True H1975_Epitope_Rep2 888.4592841451599 888.45818993586 38.977 2 -0.39800673150251664 0.1086783988957902 0.8678849190313938 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2'] 86493 27622 QKVWKRWKKRY True PC9_epitope_Rep1 1604.9415846374395 1604.9399249037901 113.18 3 -0.39811553881177164 0.10869190159069736 0.8679990254794174 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 3199 7499 AGELALEQGP True H1975_Epitope_Rep1 983.4923751785898 983.49126993586 33.843 2 -0.39813019307562164 0.10869190159069736 0.86801439251652 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3'] 142701 9223 YYQDTPKQI True PC9_epitope_Rep3 1154.5607890915799 1154.5596899358602 40.415 2 -0.3981655183844591 0.10869790229091912 0.8680514351303702 ['ENSG00000048162|ENST00000614830|NOP16'] 86494 27686 QKVWKRWKKRY True PC9_epitope_Rep1 1604.9415846374395 1604.9399249037901 113.52 3 -0.39817330801014905 0.10869790229091912 0.8680596032712968 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 86284 5089 QISAADTTYP True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 24.657 2 -0.3981891186652738 0.10869790229091912 0.8680761820130339 ['ENSG00000141519|ENST00000397545|CCDC40', 'CCDC40|p.M808Ffs*10|1|0.08|ENSG00000141519|chr17:80086187-80086188|-/CTTCC|frameshift_variant', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'nc|ENSG00000141519|Q4G0X9-4|CCDC40', 'ENST00000572083.5_1_17:78011982-78014189:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-5|CCDC40'] 94323 2674 RRRKRKKRK True NCI_RA007_Epitope_Rep2 1310.8959718576996 1310.89432490379 14.619 3 -0.3982156731655797 0.10869790229091912 0.8681040259724069 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 34945 9152 GQPHEVSV True PC9_epitope_Rep5 851.4137309350699 851.41262993586 40.15 2 -0.3982458889813368 0.10869790229091912 0.8681357081740875 ['ENSG00000173546|ENST00000308508|CSPG4', 'CSPG4|p.I1475Hfs*33|1|0.27|ENSG00000173546|chr15:75684762-75684763|-/G|frameshift_variant', 'CSPG4|p.A280V|1|0.16|ENSG00000173546|chr15:75690226-75690226|G/A|missense_variant', 'ENST00000567704.5_1_15:78188620-78189748:+|nuORF'] 91337 6617 RGRWWDAV True PC9_epitope_Rep4 1044.5253470727198 1044.52424993586 32.612 2 -0.3982582474667537 0.10869790229091912 0.8681486661576816 ['ENST00000484252.5_1_2:128396858-128398238:-|nuORF'] 36623 22095 GVIDDAFAL True PC9_epitope_Rep2 919.46509780159 919.46400993586 90.46 2 -0.3982762781128156 0.1087305283858614 0.8681675711782574 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 3090 12449 AGAAVAFI True H1975_Epitope_Rep1 718.40137534622 718.40082496793 52.922 1 -0.3983957999629489 0.10874215138342648 0.8682928808869269 ['ENSG00000147100|ENST00000587091|SLC16A2'] 64217 12070 LPGRSDVLV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 51.74 2 -0.3984298554305663 0.10874215138342648 0.8683285828941151 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 56070 5348 LATFWYYAK True NCI_RA007_Epitope_Rep1 1161.5858816406098 1161.58478993586 24.88 2 -0.3984467761368003 0.10874215138342648 0.868346321268582 ['ENST00000534385.1_1_11:118272380-118277824:+|nuORF', 'ENSG00000167283|ENST00000300688|ATP5MG', 'ENST00000527186.1_1_11:118277587-118279810:+|nuORF'] 1315 5110 AEDSDSDDNIK True H1975_Epitope_Rep3 1207.4840548925101 1207.48294993586 24.767 2 -0.39849316068558016 0.10875189733682904 0.8683949458328492 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 88360 2891 QSKMRANNQK True NCI_RA007_Epitope_Rep5 1203.61423873011 1203.61258490379 16.069 3 -0.3984959231348775 0.10875189733682904 0.8683978416202076 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 57157 6933 LDTRGELQAA True NCI_RA007_Epitope_Rep5 1072.5512870370399 1072.55018993586 33.353 2 -0.3985078531340267 0.10875189733682904 0.8684103473709998 ['ENSG00000129028|ENST00000249861|THAP10'] 29300 18935 FVDDNYVIR True PC9_epitope_Rep2 1139.56112344475 1139.56002993586 78.198 2 -0.3985137454902711 0.10875189733682904 0.8684165240455975 ['CPS1|p.H1447D|1|0.21|ENSG00000021826|chr2:210677071-210677071|C/G|missense_variant'] 68938 8709 LTPDGALAP True H1975_Epitope_Rep3 853.4545331178899 853.45342993586 38.498 2 -0.39855701590306997 0.10876726977939528 0.8684618813007536 ['ENSG00000275395|ENST00000616721|FCGBP', 'nc|ENSG00000275395|Q9Y6R7|FCGBP', 'FCGBP|p.A1971Tfs*9|1|0.06|ENSG00000275395|chr19:39893456-39893457|CA/-|frameshift_variant', 'FCGBP|p.G2617Afs*69|1|0.11|ENSG00000275395|chr19:39886329-39886329|C/-|frameshift_variant'] 36555 19540 GVGWTLLL True H1975_Epitope_Rep2 857.5010893874899 857.5005449679301 81.087 1 -0.39856143130216004 0.10878076544955932 0.8684665095421701 ['ENST00000577830.5_2_17:55938859-55939276:-|nuORF'] 82456 7798 PPPVSCQMP True H1975_Epitope_Rep2 954.43030959934 954.42920993586 34.942 2 -0.3985779630445148 0.10878076544955932 0.8684838380202451 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant', 'TENM2|p.R525Gfs*46|1|0.23|ENSG00000145934|chr5:168090628-168090628|C/-|frameshift_variant'] 59165 17833 LFAGKRAFSQK True PC9_epitope_Rep4 1251.7087907379498 1251.7076899358601 76.628 2 -0.39863666677225335 0.10881338392549154 0.8685453687759587 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A'] 126883 8984 VLQLHAVQK True H1975_Epitope_Rep1 1034.6236641316598 1034.6225699358602 39.463 2 -0.3986756389627241 0.10882875424708094 0.8685862159183849 ['ENST00000510501.1_1_8:59337214-59337583:-|nuORF'] 10184 13574 AYWTPEDTVP True PC9_epitope_Rep3 1177.5291546101298 1177.52804993586 57.267 2 -0.39877922951908407 0.10884412403849471 0.8686947830642093 ['ENST00000600775.5_1_19:58740851-58758098:+|nuORF'] 127959 11075 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 47.488 2 -0.39878861340380684 0.10885198406539397 0.8687046172484314 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 27594 16985 FNPDAQVFVP True H1975_Epitope_Rep2 1132.55530978832 1132.5542099358602 70.58 2 -0.3988458831722588 0.10885198406539397 0.8687646333583021 ['ENSG00000183864|ENST00000327492|TOB2', 'nc|ENSG00000183864|Q14106-2|TOB2', 'TOB2|p.Q146Pfs*41|1|0.47|ENSG00000183864|chr22:41436896-41436911|CAGGGAGCTGTCCTGG/-|frameshift_variant'] 30056 19440 FYHKYFNYL True PC9_epitope_Rep3 1293.61824439805 1293.6166049037902 80.002 3 -0.3988459997683702 0.10885198406539397 0.8687647555425119 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 42111 15946 IDLRTNVL True PC9_epitope_Rep3 942.5498304850599 942.54872993586 66.482 2 -0.39884792747467585 0.10885198406539397 0.8687667756360549 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 133575 19616 VWVWVCLRRRL True NCI_RA007_Epitope_Rep2 1484.8550781321599 1484.85398993586 81.25 2 -0.3988695365567692 0.10885198406539397 0.8687894201116648 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 55504 4197 LAGKLNTLAA True NCI_RA007_Epitope_Rep4 970.58113061334 970.58002993586 22.452 2 -0.39889562424314995 0.1088673518659033 0.8688167571885813 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'ENST00000487651.5_1_7:100458687-100458885:+|nuORF'] 46892 8282 ITLPEGSVIS True H1975_Epitope_Rep1 1014.5597264624199 1014.55862993586 36.79 2 -0.3989349481505885 0.10888271913638793 0.8688579631698873 ['ENSG00000145191|ENST00000648915|EIF2B5', 'ENST00000492773.5_1_3:183859720-183860594:+|nuORF', 'ENST00000491144.5_1_3:183857994-183862728:+|nuORF'] 45933 5919 ISEIESNRSFS True H1975_Epitope_Rep3 1267.60444480871 1267.60334993586 27.776 2 -0.3989550573863681 0.10889808587687533 0.8688790342818979 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 141857 9832 YVDNNRSNWL True NCI_RA007_Epitope_Rep4 1279.5945488313498 1279.59289490379 44.667 3 -0.39903325964203773 0.10891345208739286 0.8689609735117507 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 34533 15277 GPRLRVRAQHP True PC9_epitope_Rep3 1285.7479702113299 1285.74686993586 63.915 2 -0.3990479062227005 0.10896330528348738 0.8689763193522986 ['ENST00000568500.1_1_16:30709080-30709953:-|nuORF'] 106605 9643 STPVTSAVS True PC9_epitope_Rep1 847.42871229287 847.42760993586 41.947 2 -0.3991214220256179 0.10897303262293952 0.8690533419159472 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 95843 23683 RYKFIHLNV True NCI_RA007_Epitope_Rep3 1188.6767623336798 1188.67566993586 102.69 2 -0.3991471677834757 0.10897303262293952 0.8690803145695796 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'NLRP11|p.N1007Ifs*16|1|0.14|ENSG00000179873|chr19:55785709-55785709|A/-|frameshift_variant', 'ENSG00000179873|ENST00000589093|NLRP11'] 7088 13915 AQSGTIMAV True PC9_epitope_Rep3 876.43750315476 876.4369549679301 58.605 1 -0.3991554195259318 0.10897303262293952 0.8690889594119645 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3', 'MAP2K3|p.M115Ifs*45|1|0.11|ENSG00000034152|chr17:21300939-21300939|G/-|frameshift_variant'] 54153 8449 KVQDINDNAP True H1975_Epitope_Rep1 1112.5462016566 1112.5451099358602 37.427 2 -0.3991724843804878 0.10897303262293952 0.8691068370077075 ['ENSG00000145526|ENST00000382275|CDH18', 'CDH8|p.E166Q|1|0.35|ENSG00000150394|chr16:61901230-61901230|C/G|missense_variant', 'nc|ENSG00000145526|Q13634-2|CDH18', 'ENSG00000150394|ENST00000577390|CDH8'] 37095 7899 GVPRNRRWKRW True NCI_RA007_Epitope_Rep1 1509.8541666153696 1509.85252490379 34.717 3 -0.39928664446297146 0.109 0.8692264271905761 ['chr16:89199816-89200130|114|36.05|0.59|5.94|-|0|SLC22A31,None|1'] 44869 6169 INISEGNC[Carbamidomethyl]PER True NCI_RA007_Epitope_Rep1 1287.58774947818 1287.5866499358601 28.032 2 -0.3992906043769734 0.109 0.8692305752441172 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 46227 3193 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 16.897 2 -0.3992910042625951 0.109 0.8692309941279073 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 32075 12483 GESNCEWSI True PC9_epitope_Rep3 1023.39676054159 1023.3956699358599 53.042 2 -0.39930230766186087 0.109 0.869242834479464 ['nc|ENSG00000137261|Q5VV43-3|KIAA0319', 'nc|ENSG00000137261|Q5VV43-2|KIAA0319', 'ENSG00000137261|ENST00000378214|KIAA0319'] 68109 16769 LTDPDIHVL True PC9_epitope_Rep2 1021.5444107514501 1021.54330993586 69.75 2 -0.3993161302293647 0.109013482293714 0.8692573135088874 ['ENSG00000091157|ENST00000254442|WDR7', 'nc|ENSG00000091157|Q9Y4E6-2|WDR7'] 118936 13242 VADRLLVEL True NCI_RA007_Epitope_Rep5 1026.6073453611798 1026.6062499358602 57.616 2 -0.3993262243151259 0.109013482293714 0.869267886872286 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B'] 29042 13226 FTESEKKFI True PC9_epitope_Rep1 1127.5862755634298 1127.5846349037902 55.738 3 -0.39954152381914904 0.1090805647983725 0.8694933868428903 ['ENSG00000133116|ENST00000380099|KL', 'KL|p.L785Sfs*7|1|0.41|ENSG00000133116|chr13:33061427-33061428|-/T|frameshift_variant', 'nc|ENSG00000133116|Q9UEF7-2|KL'] 7817 4725 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 23.268 2 -0.3996224283179175 0.10913040479966898 0.8695781135818766 ['ENSG00000100403|ENST00000352645|ZC3H7B', 'ZC3H7B|p.S399Rfs*90|1|0.1|ENSG00000100403|chr22:41341139-41341139|C/-|frameshift_variant'] 108334 14291 SYKSMFQKL True PC9_epitope_Rep5 1130.57941636118 1130.57776490379 59.973 3 -0.39965426926683545 0.10913635580072402 0.8696114572090771 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF'] 63379 16745 LLVELTRKLTY True NCI_RA007_Epitope_Rep2 1347.81258710015 1347.8114899358602 69.868 2 -0.3996601704722847 0.10913635580072402 0.8696176368120763 ['HELQ|p.K1000R|1|0.48|ENSG00000163312|chr4:83418157-83418157|T/C|missense_variant'] 114290 5338 TPPPVQCHHR True NCI_RA007_Epitope_Rep3 1170.57164564214 1170.57054993586 28.004 2 -0.39968961605673714 0.10913635580072402 0.8696484710683202 ['ENSG00000115760|ENST00000421745|BIRC6'] 142941 13337 YYYVKNII True NCI_RA007_Epitope_Rep5 1074.57498260374 1074.57388993586 57.987 2 -0.39973371629689275 0.10913635580072402 0.8696946496587314 ['nc|ENSG00000158711|P28324-2|ELK4', 'ENSG00000158711|ENST00000357992|ELK4'] 73546 15469 MVQGCCLL True PC9_epitope_Rep1 865.3860022592099 865.38490993586 64.322 2 -0.3997638774172316 0.10913635580072402 0.8697262312141384 ['ENST00000370620.5_1_X:135748320-135748473:-|nuORF'] 63011 9289 LLPRPPAV True NCI_RA007_Epitope_Rep2 861.5436229058099 861.54252993586 40.741 2 -0.3997815346311782 0.10913635580072402 0.8697447196191133 ['nc|ENSG00000185168|Q8N8I6|LINC00482'] 117510 18265 TVRRHLQAL True PC9_epitope_Rep6 1092.6516102150001 1092.65050993586 82.897 2 -0.3997993092009804 0.10915171260622986 0.8697633306260725 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 20702 17195 EQEFSQGASL True PC9_epitope_Rep1 1094.48801807414 1094.4869299358602 70.96 2 -0.39990085885541854 0.10916518711323324 0.8698696536805206 ['nc|ENSG00000198520|Q6PIY5-2|ARMH1', 'ENST00000357508.5_1_1:45155363-45190065:+|nuORF', 'ENSG00000198520|ENST00000535358|ARMH1', 'ENST00000444751.5_1_1:45140474-45166606:+|nuORF', 'ENST00000424484.5_1_1:45155363-45158665:+|nuORF'] 43749 7623 IHHWRDRRHQK True NCI_RA007_Epitope_Rep2 1567.8344937999502 1567.8328349037902 34.276 3 -0.3999025601121521 0.10916518711323324 0.8698714348287924 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T'] 84050 16343 PVVSIEDPFD True H1975_Epitope_Rep1 1116.5339056374 1116.5333749679298 68.221 1 -0.39997574054686197 0.1091805426276416 0.8699480494492359 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 67174 4907 LSQYQQPDRR True PC9_epitope_Rep3 1289.6476470333698 1289.64601490379 23.972 3 -0.4000128497294471 0.10919589761268637 0.8699868982995392 ['ENST00000006750.7_1_17:62007703-62009599:-|nuORF', 'ENST00000392795.7_1_17:62007703-62009599:-|nuORF'] 3033 8496 AFQGPREAD True PC9_epitope_Rep1 989.4566583762098 989.45556993586 37.515 2 -0.40008285542155636 0.10924572531715389 0.8700601825965287 ['ENSG00000206530|ENST00000393845|CFAP44'] 82574 13176 PPVPLPAPS True PC9_epitope_Rep5 873.49600400705 873.49490993586 55.687 2 -0.4001369241532203 0.1092610786493614 0.8701167806650307 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 72869 11368 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45333496793 48.723 1 -0.4001751859019156 0.10928236591755136 0.8701568307872266 ['ENSG00000115233|ENST00000409682|PSMD14'] 13713 16190 DPVDKIVL True PC9_epitope_Rep1 897.5171333744499 897.51602993586 67.091 2 -0.4002256663548369 0.10928236591755136 0.8702096688128627 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 54744 9555 KYMEDYHQF True PC9_epitope_Rep4 1259.52810906431 1259.5270099358602 44.369 2 -0.40023157335972087 0.10928236591755136 0.8702158515491968 ['ENSG00000118898|ENST00000345988|PPL'] 13582 10363 DPENRAGHSVA True H1975_Epitope_Rep1 1151.53194857479 1151.53084993586 44.811 2 -0.4002440501654482 0.10928236591755136 0.870228910659031 ['ENST00000592003.1_1_19:16437928-16437985:+|nuORF'] 30222 23397 FYTEWWREKRM True NCI_RA007_Epitope_Rep3 1630.7714676474995 1630.7703699358601 101.58 2 -0.40027290336235166 0.10928236591755136 0.87025910995649 ['ENST00000292599.3_1_5:179203171-179203312:+|nuORF'] 112648 12392 TLFLQDNNI True PC9_epitope_Rep2 1076.55022440788 1076.54912993586 52.974 2 -0.4002746470542249 0.10928236591755136 0.8702609349750071 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 136200 24927 WRRWHRRVNTT True H1975_Epitope_Rep2 1566.8392448272198 1566.8381499358602 102.46 2 -0.4003123593224125 0.10928236591755136 0.8703004055340074 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF'] 81710 15636 PLNFSANFLP True H1975_Epitope_Rep1 1118.5760452329 1118.57494993586 65.43 2 -0.4003285975617252 0.10929583290249198 0.8703174004933927 ['ENST00000532986.1_1_11:62339151-62341470:-|nuORF'] 55129 8153 LAADPSHP True PC9_epitope_Rep2 806.3922672145 806.39116993586 36.717 2 -0.4003399643791991 0.10929583290249198 0.8703292968853402 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 31725 4552 GEGQLGPAER True PC9_epitope_Rep3 1012.4937721609199 1012.49266993586 22.601 2 -0.40043852767889193 0.10931118272528306 0.8704324476642024 ['ENSG00000167658|ENST00000309311|EEF2'] 47090 10210 ITTGQAAP True PC9_epitope_Rep4 757.3970182417698 757.39592993586 46.95 2 -0.40046291243769183 0.10932464802081718 0.870457966124538 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 37712 9961 GVYSLSAP True PC9_epitope_Rep2 792.40176926904 792.40066993586 43.646 2 -0.40047312074570995 0.10932464802081718 0.87046864889282 ['ENST00000380325.3_1_20:3028531-3028840:+|nuORF'] 108821 4997 SYVKEFWWFP True NCI_RA007_Epitope_Rep2 1387.6601092100295 1387.6584749037902 24.061 3 -0.40057731881123265 0.10935722901947269 0.8705776849330873 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1'] 70022 13577 LVMFQRRYYKP True H1975_Epitope_Rep3 1499.8071248802298 1499.8060299358601 57.507 2 -0.40059350863780824 0.10938980889524565 0.8705946256600513 ['ENSG00000099194|ENST00000370355|SCD'] 48776 21413 KDLEVITV True PC9_epitope_Rep2 915.52769805815 915.52660993586 87.836 2 -0.4006428338740572 0.10940919037199125 0.8706462373271048 ['ENSG00000006607|ENST00000264042|FARP2', 'FARP2|p.C654Lfs*26|1|0.39|ENSG00000006607|chr2:241468207-241468207|G/-|frameshift_variant', 'nc|ENSG00000006607|O94887-3|FARP2', 'nc|ENSG00000006607|O94887-2|FARP2'] 18054 15968 EIFPSKLSL True PC9_epitope_Rep2 1032.5855472874398 1032.5844499358602 66.674 2 -0.4006525348622463 0.10940919037199125 0.8706563877627507 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1'] 10110 12671 AYVEKFSYKS True NCI_RA007_Epitope_Rep2 1220.607739284 1220.60664993586 53.902 2 -0.40066308265533956 0.10940919037199125 0.8706674241487903 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 75950 8205 NLSVQQPP True NCI_RA007_Epitope_Rep1 881.46068112749 881.45958993586 35.914 2 -0.40067267146312563 0.10940919037199125 0.8706774570489677 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 15559 7946 EAQCCSPTV True NCI_RA007_Epitope_Rep3 936.3681032656 936.36700993586 38.362 2 -0.40072637038458825 0.10940919037199125 0.8707336415814698 ['ENST00000514938.1_1_22:50943492-50943879:-|nuORF', 'ENST00000474879.6_3_22:50943492-50943863:-|nuORF'] 492 15636 AANPLVVG True PC9_epitope_Rep3 739.42283906679 739.42229496793 65.29 1 -0.40075648765380856 0.10940919037199125 0.8707651518940525 ['ENSG00000092051|ENST00000356300|JPH4'] 14586 8748 DTWESLQK True PC9_epitope_Rep3 1005.47672511445 1005.47562993586 38.603 2 -0.40076436502355084 0.10940919037199125 0.8707733935026069 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 97688 14747 SEIDLLNIRR True PC9_epitope_Rep4 1227.6935345966301 1227.69187490379 64.658 3 -0.40076855270382933 0.10940919037199125 0.8707777747951283 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 20468 16205 EPIPYEFMA True NCI_RA007_Epitope_Rep4 1095.49468367771 1095.4935899358602 70.272 2 -0.4008134166918166 0.10944176430048243 0.8708247121287684 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 44499 12496 ILLKHIDLP True PC9_epitope_Rep3 1060.66446631448 1060.6633699358601 53.092 2 -0.4009332029965568 0.10947245098377037 0.8709500263480578 ['ENST00000309050.9_2_12:110479455-110479527:-|nuORF'] 71970 4633 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 22.943 2 -0.4009484599540858 0.10947245098377037 0.8709659865660314 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 29476 9888 FVETVEADP True H1975_Epitope_Rep1 1005.4654917244098 1005.46438993586 42.967 2 -0.40108501753147796 0.10953947935151526 0.8711088305106336 ['ENST00000489245.5_1_3:183211997-183273441:-|nuORF', 'ENSG00000172578|ENST00000341319|KLHL6'] 42652 10694 IEHGIITNWD True NCI_RA007_Epitope_Rep1 1196.5825871653199 1196.5814899358602 45.588 2 -0.4011229671030237 0.10954915844057402 0.8711485244793435 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 127741 13321 VPASCVGNVP True PC9_epitope_Rep3 941.46405225577 941.46294993586 56.273 2 -0.40112847126276696 0.10954915844057402 0.8711542815511985 ['ENST00000380358.8_2_17:7814903-7815650:+|nuORF'] 136550 9744 WWFSWRRRDFL True NCI_RA007_Epitope_Rep2 1653.8316998352896 1653.8306099358601 42.523 2 -0.401134412560946 0.10954915844057402 0.8711604958212454 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 58760 16463 LESEVFPDP True PC9_epitope_Rep1 1031.4811417885498 1031.48004993586 68.15 2 -0.40114349343457556 0.10954915844057402 0.871169993860975 ['ENST00000225964.9_1_17:48268227-48270392:-|nuORF'] 67310 19279 [Acetylation]-LSSALVLF True NCI_RA007_Epitope_Rep2 890.51132003432 890.51077496793 79.892 1 -0.4011701007620245 0.10955317463051642 0.8711978231336309 ['ENST00000304032.12_1_2:237036907-237036982:+|nuORF'] 101001 12682 SLFWKLFML True PC9_epitope_Rep5 1183.64637372219 1183.6447349037899 53.787 3 -0.4011797224946866 0.10955317463051642 0.8712078866106852 ['ENST00000260818.10_1_3:132233460-132235298:+|nuORF'] 85552 5988 QGENIDKLT True PC9_epitope_Rep3 1016.51383889916 1016.51274993586 28.086 2 -0.40118253064637804 0.10955317463051642 0.8712108236742262 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 55127 6472 LAADPSHP True NCI_RA007_Epitope_Rep5 806.3922672145 806.39116993586 31.56 2 -0.40125278713443197 0.10955317463051642 0.8712843033975811 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 74088 6181 NDQRALRKLQR True NCI_RA007_Epitope_Rep1 1396.8011279829998 1396.79947490379 28.078 3 -0.4013158691372689 0.10955317463051642 0.8713502762545628 ['ENST00000535413.1_1_12:121134228-121138519:+|nuORF'] 5578 7215 ANETENDIKV True PC9_epitope_Rep1 1131.54078192299 1131.53968993586 32.567 2 -0.4013160679271618 0.10955317463051642 0.8713504841495775 ['ENSG00000175820|ENST00000322527|CCDC168'] 81531 9785 PLIAKADTL True PC9_epitope_Rep4 940.5593325396 940.55822993586 45.28 2 -0.4013298666445097 0.10955317463051642 0.8713649148123749 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF'] 16244 11805 EEERYFRHYR True H1975_Epitope_Rep1 1483.6956598549498 1483.69456993586 50.402 2 -0.40136428370454735 0.10956662532727023 0.871400907453024 ['nc|ENSG00000130770|Q9UII2-2|ATP5IF1'] 132384 17370 VVAGILVQ True PC9_epitope_Rep5 797.5010893874901 797.5005449679301 71.815 1 -0.4013656638367865 0.10956662532727023 0.8714023507476513 ['nc|ENSG00000081307|Q9GZZ9-2|UBA5', 'ENSG00000081307|ENST00000356232|UBA5'] 87643 4152 QQQYLTRLR True NCI_RA007_Epitope_Rep5 1204.66765420196 1204.66600490379 22.481 3 -0.4014083449200685 0.10959729925247166 0.8714469844379871 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 106035 6670 SSYRRVMSSP True H1975_Epitope_Rep3 1168.56589155536 1168.56478993586 30.61 2 -0.40151630955396445 0.10959729925247166 0.8715598821924461 ['nc|ENSG00000138376|Q99728-3|BARD1', 'nc|ENSG00000138376|Q99728-2|BARD1', 'ENSG00000138376|ENST00000260947|BARD1'] 48893 3003 KEDEDYMPIK True NCI_RA007_Epitope_Rep1 1266.5802042068196 1266.57856490379 15.548 3 -0.4015641723835778 0.10960697185766939 0.8716099291798521 ['ENSG00000131013|ENST00000253329|PPIL4'] 31903 14456 GELTMTFPA True H1975_Epitope_Rep3 965.4528188657299 965.4522749679301 60.963 1 -0.4016077683621506 0.10960697185766939 0.8716555131225501 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 69992 21600 LVLTHSWLL True PC9_epitope_Rep3 1080.6331661862 1080.63206993586 88.379 2 -0.4016136250505216 0.10960697185766939 0.8716616367669904 ['ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 113095 15388 TLNSSQEKLF True PC9_epitope_Rep5 1165.59790287629 1165.5962549037902 64.198 3 -0.40161488899975417 0.10960697185766939 0.871662958325475 ['nc|ENSG00000138182|Q96Q89-4|KIF20B', 'nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'KIF20B|p.G494V|1|0.35|ENSG00000138182|chr10:89719465-89719465|G/T|missense_variant'] 63808 15645 LNHEDLVL True PC9_epitope_Rep2 951.5025459394699 951.50144993586 65.453 2 -0.4016479351079307 0.10963764122347754 0.8716975102161775 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000496379.5_1_15:91433070-91435551:+|nuORF', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 44692 15993 ILTNKTISI True PC9_epitope_Rep2 1001.61209638845 1001.61098993586 66.77 2 -0.4016880966034031 0.10963764122347754 0.8717395006324578 ['ENSG00000180974|ENST00000641726|OR52E4', 'OR52E4|p.M136V|1|0.13|ENSG00000180974|chr11:5884698-5884698|A/G|missense_variant'] 91812 20496 RKIIGMLIP True PC9_epitope_Rep1 1039.65760711223 1039.6565099358602 83.65 2 -0.40182196389922464 0.10965297511409627 0.8718794556211454 ['ENST00000409245.5_1_2:47143345-47143381:+|nuORF'] 68186 17991 LTDRLQLTL True PC9_epitope_Rep2 1071.62880908175 1071.6277099358601 74.504 2 -0.40186088342566734 0.10966830847656116 0.8719201425976469 ['ENSG00000061918|ENST00000264424|GUCY1B1', 'nc|ENSG00000061918|Q02153-3|GUCY1B1', 'nc|ENSG00000061918|Q02153-2|GUCY1B1'] 47133 18520 ITVHHTEVL True PC9_epitope_Rep1 1047.57129420563 1047.57018993586 76.026 2 -0.40192626400479026 0.10969708450291894 0.8719884898502724 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 42059 7071 IDKLEERFR True H1975_Epitope_Rep3 1204.6564208119198 1204.6553299358602 32.166 2 -0.40195105902202655 0.10969708450291894 0.8720144091529589 ['ENSG00000149679|ENST00000279101|CABLES2'] 79620 20671 PDLSPLKLTI True PC9_epitope_Rep4 1095.65396120043 1095.65286993586 87.669 2 -0.4019546217103221 0.10969708450291894 0.8720181333489354 ['ENST00000551270.1_1_12:104283206-104309165:-|nuORF', 'nc|ENSG00000214198|Q6P2S7-2|TTC41P', 'nc|ENSG00000214198|Q6P2S7|TTC41P', 'ENST00000548520.1_1_12:104283206-104286955:-|nuORF'] 89663 14193 QYVDFHNQL True PC9_epitope_Rep4 1162.54072235334 1162.5396299358601 62.499 2 -0.4020190947336381 0.10971052676895525 0.8720855275757289 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 8539 6384 ATTQANGGWP True PC9_epitope_Rep2 1001.4566583762098 1001.45556993586 29.961 2 -0.4020250698968642 0.10971052676895525 0.8720917733180784 ['ENSG00000091664|ENST00000263160|SLC17A6'] 72144 12725 MFVFKERWFWR True NCI_RA007_Epitope_Rep1 1630.8231092975398 1630.82146490379 53.482 3 -0.40205831074067594 0.10972585755613722 0.8721265189793551 ['ENSG00000157227|ENST00000311852|MMP14'] 79894 7231 PEPALESVP True H1975_Epitope_Rep3 937.47566248529 937.47456993586 32.786 2 -0.40209094327571254 0.10973929813685987 0.8721606280371808 ['ENSG00000274588|ENST00000611977|DGKK', 'DGKK|p.R206Efs*9|1|0.4|ENSG00000274588|chrX:50470064-50470064|G/-|frameshift_variant'] 46434 19866 ISSVPWYIDP True PC9_epitope_Rep3 1175.58627556343 1175.5851699358602 81.651 2 -0.40211924188045184 0.10973929813685987 0.8721902064629432 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000521190.5_1_5:159840839-159846079:-|nuORF', 'SLU7-FAM204A|1|fusion'] 83719 15614 PVGLEPVV True PC9_epitope_Rep3 808.4694549060399 808.46834993586 65.207 2 -0.402152598673056 0.1097987224297939 0.8722250711174887 ['AQP10|p.A187V|1|0.31|ENSG00000143595|chr1:154323659-154323659|C/T|missense_variant'] 83311 15871 PTDWQKKILI True PC9_epitope_Rep4 1240.7179584393198 1240.7163149037901 68.978 3 -0.40218005426974907 0.1097987224297939 0.8722537672367869 ['ENSG00000114023|ENST00000477892|FAM162A'] 68687 14978 LTKEYDRLLEE True NCI_RA007_Epitope_Rep2 1407.7245599413898 1407.72346993586 62.943 2 -0.40218175036520915 0.1097987224297939 0.8722555399495278 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 102249 5714 SLSGSDVVSA True H1975_Epitope_Rep3 920.445090633 920.44454496793 27.007 1 -0.40218662254160814 0.1097987224297939 0.8722606322043859 ['ENST00000505457.1_1_5:6749703-6750667:+|nuORF'] 13098 17788 DLQMEVVTL True PC9_epitope_Rep3 1046.53179746242 1046.5307099358602 73.623 2 -0.40226529925437915 0.1097987224297939 0.872342860507444 ['ENST00000468586.5_1_1:62149184-62190652:-|nuORF'] 111620 13110 TIDPPECQGP True PC9_epitope_Rep2 1055.4593607981499 1055.45826993586 55.703 2 -0.4023032028461007 0.10981404958677686 0.8723824736057902 ['CACNA1G|p.S2318C|1|0.19|ENSG00000006283|chr17:50626569-50626569|A/T|missense_variant'] 15371 13657 EAGSTSWDGSL True H1975_Epitope_Rep2 1108.46728262956 1108.46618993586 57.671 2 -0.4023551502484667 0.1098447023174133 0.872436762314714 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D'] 63820 20095 LNIMEEYDWYI True PC9_epitope_Rep2 1487.6642681839498 1487.6626349037901 82.704 3 -0.4023623769239948 0.1098447023174133 0.8724443145559855 ['GRIN2B|p.A794Lfs*16|1|0.52|ENSG00000273079|chr12:13567243-13567243|C/-|frameshift_variant', 'ENSG00000273079|ENST00000609686|GRIN2B'] 81413 6598 PLEHYILELK True NCI_RA007_Epitope_Rep5 1253.70197402201 1253.70031490379 32.038 3 -0.40238297142591145 0.10985435388906105 0.8724658366570491 ['NUP210L|p.Q297K|1|0.18|ENSG00000143552|chr1:154135934-154135934|G/T|missense_variant'] 87389 5929 QPVKLQEA True PC9_epitope_Rep5 911.5076313199099 911.50652993586 27.801 2 -0.4024010902207337 0.10985435388906105 0.8724847713046312 ['ENSG00000101407|ENST00000373447|TTI1', 'TTI1|p.R1028W|1|0.07|ENSG00000101407|chr20:37996379-37996379|T/A|missense_variant'] 48221 16037 IYPWVHVVI True NCI_RA007_Epitope_Rep5 1124.6382515666398 1124.6371499358602 68.414 2 -0.4024195865732789 0.10985435388906105 0.8725041002815127 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3'] 103445 11704 SPPSQSVQL True PC9_epitope_Rep5 941.4818104948899 941.48070993586 50.017 2 -0.40244382896927994 0.10985435388906105 0.8725294336137902 ['ENSG00000121621|ENST00000263181|KIF18A'] 116427 17433 TTKPAVIF True PC9_epitope_Rep2 875.5116540711899 875.51054993586 72.309 2 -0.4025178299400709 0.10992132490918795 0.8726067622730537 ['HCFC1|p.I1979V|1|0.18|ENSG00000172534|chrX:153950312-153950312|T/C|missense_variant'] 65101 16508 LQLWQERERRQ True NCI_RA007_Epitope_Rep2 1540.8222573504 1540.82116993586 68.941 2 -0.4025384757673868 0.10997107836386173 0.8726283358512681 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF', 'ENST00000498539.1_1_7:100174858-100175272:-|nuORF'] 81415 9498 PLEHYILELK True PC9_epitope_Rep5 1253.70197402201 1253.70031490379 41.49 3 -0.40264476181613723 0.11000361514228167 0.8727393934512506 ['NUP210L|p.Q297K|1|0.18|ENSG00000143552|chr1:154135934-154135934|G/T|missense_variant'] 91784 25306 RKGKKKKRWH True PC9_epitope_Rep3 1350.8472903297798 1350.8461899358601 102.75 2 -0.4027032006590847 0.11001704222685098 0.8728004525065896 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 140612 23266 YRRKLQHFQEE True PC9_epitope_Rep6 1532.7848092125203 1532.78370993586 102.59 2 -0.40272317537224506 0.11001704222685098 0.8728213222757037 ['nc|ENSG00000198865|Q4G0S7-2|CCDC152', 'ENSG00000198865|ENST00000361970|CCDC152'] 41687 18913 IAGVTGFIGL True PC9_epitope_Rep5 946.5487678559 946.54766993586 77.77 2 -0.40284241864008974 0.11007831999311472 0.8729459028811563 ['nc|ENSG00000198513|Q8WXF7-2|ATL1', 'ENSG00000198513|ENST00000358385|ATL1'] 4945 6690 ALGENGVIK True PC9_epitope_Rep6 899.5076313199099 899.50652993586 34.489 2 -0.4028428364594748 0.11007831999311472 0.8729463393842398 ['ENST00000496004.5_1_7:151188088-151217094:-|nuORF'] 37660 2699 GVWYFNSPYPK True NCI_RA007_Epitope_Rep2 1356.65027280232 1356.64861490379 14.725 3 -0.40286248905380484 0.11007831999311472 0.8729668706438936 ['nc|ENSG00000105695|P20916-2|MAG', 'nc|ENSG00000105695|P20916-3|MAG', 'ENSG00000105695|ENST00000392213|MAG'] 12788 12894 DLETSKYIL True PC9_epitope_Rep4 1080.5702911461199 1080.56918993586 57.475 2 -0.40291630418995117 0.11007831999311472 0.873023090407415 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B'] 84942 4719 QEEHQLSV True PC9_epitope_Rep1 968.4563240230399 968.45522993586 23.021 2 -0.40296584244841194 0.1101089557119989 0.8730748403047747 ['ENST00000446716.5_1_2:220081206-220083551:-|nuORF'] 20218 9842 ENLAGVRTN True NCI_RA007_Epitope_Rep2 972.49885754136 972.49776993586 42.908 2 -0.4029811258819452 0.1101089557119989 0.8730908057003229 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3', 'nc|ENSG00000140859|Q9BVG8-5|KIFC3'] 31937 12205 GENILNPLRRW True NCI_RA007_Epitope_Rep1 1366.74696715182 1366.7458699358601 51.442 2 -0.40305090427364776 0.11014148507693897 0.8731636954466542 ['ENSG00000100445|ENST00000399395|SDR39U1', 'ENST00000555225.5_1_14:24910114-24911620:-|nuORF', 'ENST00000555355.5_2_14:24909893-24911445:-|nuORF', 'ENST00000553930.5_1_14:24909736-24911620:-|nuORF', 'ENST00000555778.1_1_14:24910766-24911445:-|nuORF'] 31823 13354 GEIQAMRQKSR True H1975_Epitope_Rep1 1302.6826526430998 1302.6815499358602 56.476 2 -0.4031045694379238 0.11015490533562823 0.8732197509804932 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant'] 12456 20015 DIWYSSITA True PC9_epitope_Rep1 1054.49712620586 1054.4960299358602 81.813 2 -0.40311676205153385 0.11015490533562823 0.8732324863736702 ['OR4M1|p.L68V|1|0.12|ENSG00000176299|chr14:19780524-19780524|C/G|missense_variant', 'ENSG00000274102|ENST00000614722|OR4M2', 'ENSG00000182974|ENST00000332663|OR4M2B', 'ENSG00000176299|ENST00000641200|OR4M1'] 104350 18418 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54427496793 76.05 1 -0.4031761907702773 0.1101874322300821 0.8732945590409517 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 102915 13362 SPASQLVAT True PC9_epitope_Rep2 872.46034677432 872.45924993586 56.672 2 -0.40320337301185066 0.11019895360044059 0.8733229496882023 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 97915 7393 SEMSPVPMRSA True H1975_Epitope_Rep2 1190.54237922946 1190.54128993586 33.379 2 -0.4032216179695397 0.11019895360044059 0.8733420054133466 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6'] 83174 11575 PSSQSIWFLKT True H1975_Epitope_Rep3 1292.67648755016 1292.67538993586 49.653 2 -0.4032330471608078 0.11019895360044059 0.8733539423602565 ['ENSG00000213462|ENST00000394323|ERV3-1'] 126562 16553 VLLRMACSNI True H1975_Epitope_Rep1 1118.5940208795 1118.5929299358602 69.046 2 -0.40323989727173154 0.11020668054862413 0.8733610967462154 ['ENSG00000184166|ENST00000641833|OR1D2'] 77586 19397 NTDRSWLI True PC9_epitope_Rep1 1003.5086939490699 1003.50758993586 79.422 2 -0.4032892332773276 0.11020668054862413 0.8734126231080972 ['ENSG00000118997|ENST00000312428|DNAH7'] 31038 8472 GASYTAQP True PC9_epitope_Rep2 793.3606327330499 793.35952993586 37.954 2 -0.40331543682181314 0.11020668054862413 0.8734399892140547 ['ENSG00000105278|ENST00000262961|ZFR2', 'nc|ENSG00000105278|Q9UPR6-3|ZFR2'] 119966 15661 VDPAPEGSPL True PC9_epitope_Rep1 980.4814761417199 980.48036993586 65.06 2 -0.4033355643741826 0.11020668054862413 0.8734610093824119 ['nc|ENSG00000167103|Q5T9C9-2|PIP5KL1', 'ENST00000464759.5_1_9:130684128-130689655:-|nuORF', 'ENST00000498783.5_1_9:130687427-130690958:-|nuORF', 'ENSG00000167103|ENST00000388747|PIP5KL1'] 25863 10868 FFHFFSSL True NCI_RA007_Epitope_Rep3 1030.4912529797798 1030.49014993586 49.809 2 -0.4033360020710664 0.11020668054862413 0.8734614664866347 ['ENST00000556419.5_1_14:23468454-23479348:-|nuORF'] 35927 7865 GTSKTSVNW True H1975_Epitope_Rep3 978.4770594676199 978.47596993586 35.228 2 -0.4033609771210499 0.11022199277232834 0.8734875486657394 ['LRRC4B|p.M391K|1|0.17|ENSG00000131409|chr19:50518541-50518541|A/T|missense_variant'] 13701 11280 DPSVALLQ True NCI_RA007_Epitope_Rep4 841.4545331178899 841.4539849679301 50.282 1 -0.40337075672153916 0.1102373044690334 0.8734977616523766 ['nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7'] 120485 13136 VEEWKCMYTP True H1975_Epitope_Rep2 1284.5518812839998 1284.5507899358602 55.649 2 -0.40338952542963297 0.11025261563876652 0.8735173618838891 ['ADAMTSL1|p.C1678Vfs*28|1|0.41|ENSG00000178031|chr9:18906759-18906760|-/T|frameshift_variant', 'ADAMTSL1|p.N1700Tfs*41|1|0.33|ENSG00000178031|chr9:18906826-18906826|C/-|frameshift_variant', 'ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-2|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-1|ADAMTSL1', 'ENST00000546040.1_1_9:18657630-18684799:+|nuORF'] 54913 8259 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 41.365 3 -0.4034017191044868 0.1102679262815549 0.8735300956297989 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 46291 12753 ISPVFSQTSV True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 56.915 2 -0.40346763180408485 0.11028323639742575 0.8735989255603477 ['ENST00000605834.1_1_4:185396718-185397009:+|nuORF'] 98313 9201 SEVQYIQEA True NCI_RA007_Epitope_Rep4 1065.4978544818498 1065.4967499358602 42.237 2 -0.4034991428915328 0.11029854598640626 0.8736318300274044 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 71968 4441 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 22.205 2 -0.40358466785538255 0.11034826897928281 0.873721132602415 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 110914 6143 TGVPQEWQVK True H1975_Epitope_Rep1 1170.6033226099 1170.60166490379 28.699 3 -0.4036722327308355 0.11034838709677419 0.873812558755843 ['ENST00000586602.5_1_19:9678795-9679729:-|nuORF'] 125215 13754 VIIITTDTSP True PC9_epitope_Rep2 1058.5859412102602 1058.5848499358601 58.191 2 -0.40371102703724876 0.11034838709677419 0.8738530616329808 ['ENSG00000272031|ENST00000606888|ANKRD34A'] 57276 9154 LDYRLEEDVTK True H1975_Epitope_Rep1 1379.69325981311 1379.6921699358602 40.117 2 -0.40372898973404403 0.11034838709677419 0.8738718149959972 ['ENSG00000161048|ENST00000465647|NAPEPLD', 'ENST00000479761.1_1_7:102768884-102769223:-|nuORF'] 42331 17274 IEAFRSRLI True PC9_epitope_Rep1 1103.64512785223 1103.64402993586 71.262 2 -0.4037307919001495 0.11034838709677419 0.8738736964727283 ['nc|ENSG00000170085|Q8NDZ2-4|SIMC1', 'nc|ENSG00000170085|Q8NDZ2-3|SIMC1', 'nc|ENSG00000170085|Q8NDZ2|SIMC1', 'ENSG00000170085|ENST00000429602|SIMC1'] 99856 12286 SILKEVDNP True H1975_Epitope_Rep3 1013.5393253710099 1013.53822993586 52.436 2 -0.403761427465042 0.11034838709677419 0.8739056798278861 ['ENST00000413704.5_1_3:9487316-9517772:+|nuORF'] 122424 8551 VGDVFRGG True PC9_epitope_Rep2 805.4082516318099 805.40714993586 38.253 2 -0.40380251530637434 0.11034838709677419 0.8739485740040771 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 60454 23162 LGVVEEQII True PC9_epitope_Rep5 998.5648118428599 998.56370993586 94.081 2 -0.4038145734595804 0.11034838709677419 0.8739611619836233 ['ENST00000409025.5_1_2:85875970-85876307:+|nuORF'] 40016 17603 HPRTSAQIHLL True PC9_epitope_Rep5 1271.7098533671099 1271.7087499358602 72.719 2 -0.40382947258045293 0.11034838709677419 0.8739767155825048 ['nc|ENSG00000130714|Q9Y6A1-4|POMT1', 'nc|ENSG00000130714|Q9Y6A1-3|POMT1', 'ENSG00000130714|ENST00000402686|POMT1', 'nc|ENSG00000130714|Q9Y6A1|POMT1'] 123057 9541 VGKAVENLI True NCI_RA007_Epitope_Rep3 941.55458151233 941.55348993586 44.616 2 -0.40388974281377443 0.11034838709677419 0.8740396313009352 ['ENSG00000091157|ENST00000254442|WDR7', 'nc|ENSG00000091157|Q9Y4E6-2|WDR7'] 26111 12431 FGSGAGSSSF True PC9_epitope_Rep1 902.37701107318 902.37590993586 52.679 2 -0.40389997946525813 0.11036369266765303 0.8740503169531809 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 49584 5227 KFVKALVG True NCI_RA007_Epitope_Rep3 860.5483739330798 860.54726993586 27.563 2 -0.4039167402405671 0.11037140252189022 0.8740678126866008 ['BTNL3|p.Q29K|1|0.38|ENSG00000168903|chr5:180992848-180992848|C/A|missense_variant'] 127974 9445 VPHLLTEA True PC9_epitope_Rep4 878.48616759934 878.48506993586 43.941 2 -0.4039655002722542 0.11037140252189022 0.8741187093912745 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 18567 20482 EKPFALFL True H1975_Epitope_Rep1 963.5429541994698 963.54184993586 85.188 2 -0.4040071526881965 0.11037140252189022 0.8741621853039476 ['ENSG00000176058|ENST00000409012|TPRN', 'nc|ENSG00000176058|Q4KMQ1-2|TPRN', 'nc|ENSG00000176058|Q4KMQ1-4|TPRN', 'nc|ENSG00000176058|Q4KMQ1-3|TPRN', 'ENST00000477345.1_1_9:140086566-140087185:-|nuORF'] 112381 10961 TLARATSAL True PC9_epitope_Rep4 902.5185303567799 902.51742993586 49.932 2 -0.40401709276535896 0.11037140252189022 0.8741725603111166 ['ENST00000575310.1_1_17:7346921-7347071:+|nuORF'] 55662 21129 LALAIYTGV True PC9_epitope_Rep4 919.53786881903 919.53676993586 89.435 2 -0.40405776595657167 0.11037140252189022 0.8742150122146702 ['ENSG00000105370|ENST00000596399|LIM2', 'nc|ENSG00000105370|P55344-2|LIM2'] 52351 24717 KKKKRKWLRQE True NCI_RA007_Epitope_Rep5 1526.9521493211398 1526.95104993586 102.56 2 -0.40409218551556453 0.11040390834652171 0.8742509358030658 ['ENSG00000187862|ENST00000368236|TTC24'] 17363 9646 EHDGSLFQA True PC9_epitope_Rep6 1002.4406739589 1002.43956993586 47.457 2 -0.40415599373362754 0.11041351314159902 0.8743175293097949 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 59724 8314 LGDGSGVLNNR True H1975_Epitope_Rep3 1100.5574350466402 1100.55632993586 36.963 2 -0.4041876951244477 0.11041351314159902 0.8743506130670747 ['ENSG00000182885|ENST00000333493|ADGRG3'] 85663 21623 QGPLLLPGL True PC9_epitope_Rep5 906.5538532363399 906.55274993586 88.213 2 -0.4042092437325076 0.11041351314159902 0.8743731007753901 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000131355|Q9BY15-3|ADGRE3'] 74479 13091 NEYRKRFMLKP True PC9_epitope_Rep3 1480.7972884725195 1480.7956349037902 55.378 3 -0.404259739505007 0.11041351314159902 0.8744257954418848 ['ENSG00000073756|ENST00000367468|PTGS2'] 16796 9565 EEVGTPHQDVP True PC9_epitope_Rep3 1206.55168095986 1206.5505899358602 41.743 2 -0.40430035568794565 0.11042691527056314 0.874468178519769 ['ENSG00000125872|ENST00000378858|LRRN4'] 69394 12492 LTWIEYWP True PC9_epitope_Rep1 1106.54368247546 1106.5425899358602 52.918 2 -0.40432597214281885 0.11042691527056314 0.8744949085254676 ['ENSG00000106804|ENST00000223642|C5'] 99858 20337 SILLKVVCV True PC9_epitope_Rep3 972.60417455704 972.60306993586 83.477 2 -0.40434892995365057 0.11043841695189281 0.8745188637721847 ['ENST00000295087.12_1_2:152659146-152659368:-|nuORF'] 105078 20532 SRDRRRNPRRF True NCI_RA007_Epitope_Rep5 1514.84030745638 1514.83920993586 85.917 2 -0.4043849458196676 0.11043841695189281 0.8745564433606086 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'ENSG00000059145|ENST00000389221|UNKL', 'nc|ENSG00000059145|Q9H9P5-5|UNKL', 'nc|ENSG00000059145|Q9H9P5-6|UNKL', 'ENST00000502438.6_1_16:1449373-1453182:-|nuORF', 'ENST00000509981.1_1_16:1447085-1449499:-|nuORF'] 44098 4250 IINGKVGG True PC9_epitope_Rep4 756.4493881677998 756.44828993586 22.74 2 -0.4043856868225524 0.11043841695189281 0.8745572165226778 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 108655 21261 SYPTFFPRF True PC9_epitope_Rep3 1160.5654805491997 1160.5643899358602 87.074 2 -0.40446057495155296 0.11046901604664362 0.8746353519616357 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 107760 7400 SVSSLCKLYFR True NCI_RA007_Epitope_Rep2 1301.6801930316099 1301.67908993586 33.41 2 -0.4044634862134968 0.11046901604664362 0.8746383893496518 ['nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-10|ARHGAP33'] 58290 8158 LELVRQAP True H1975_Epitope_Rep2 924.5392658013599 924.53816993586 36.331 2 -0.40448743383574626 0.11048051456678018 0.8746633741455313 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 96772 5331 SAPPHHGSWCR True NCI_RA007_Epitope_Rep4 1233.54615917029 1233.54451490379 27.071 3 -0.4044990279372781 0.11048051456678018 0.8746754701823249 ['ENST00000571814.1_2_17:81042314-81042740:+|nuORF'] 88846 11402 QVASVLTLL True NCI_RA007_Epitope_Rep3 942.57498260374 942.57388993586 51.972 2 -0.4044990418241361 0.11048051456678018 0.8746754846702961 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|367|2|anti-sense'] 32966 12131 GIDVWEHAY True H1975_Epitope_Rep3 1088.4927095317598 1088.4916099358602 51.829 2 -0.4045426338150796 0.11049581233769584 0.8747209626482152 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2', 'ENST00000541573.5_1_6:160103527-160113001:-|nuORF', 'ENST00000535459.5_1_6:160103527-160109299:-|nuORF', 'ENST00000546260.5_1_6:160103527-160113680:-|nuORF'] 100955 10142 SLFLEYAKNP True H1975_Epitope_Rep3 1180.6128246644398 1180.61172993586 44.055 2 -0.40454554163236683 0.1105111095824448 0.8747239962026322 ['nc|ENSG00000116748|P23109-2|AMPD1', 'ENSG00000116748|ENST00000520113|AMPD1'] 106285 21838 STFHDQIAML True PC9_epitope_Rep2 1161.5488445088897 1161.54774993586 89.475 2 -0.4045828913711726 0.11053980155113412 0.8747629602219363 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 139609 11037 YLYKFRHSPNC True NCI_RA007_Epitope_Rep1 1426.6815900139397 1426.6804899358601 46.928 2 -0.4045854105642729 0.11053980155113412 0.8747655882452022 ['ENSG00000113048|ENST00000261413|MRPS27'] 9187 23795 AVLRYVRLFFF True PC9_epitope_Rep5 1429.8234265673698 1429.8223299358601 96.508 2 -0.404586885392162 0.11053980155113412 0.8747671267832557 ['ENST00000546957.1_1_12:56223229-56223322:-|nuORF'] 12946 9295 DLLCILADP True H1975_Epitope_Rep3 971.4997690581499 971.49866993586 40.748 2 -0.40459986293706096 0.11054749294999656 0.8747806648413655 ['ENST00000330825.3_1_13:45963855-45964907:+|nuORF'] 53532 17752 KRLYYREKKYK True H1975_Epitope_Rep3 1573.90928144965 1573.90818993586 74.236 2 -0.40461375362018975 0.11054749294999656 0.8747951552865174 ['ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4', 'nc|ENSG00000135124|Q99571-2|P2RX4'] 68769 18290 LTLGNFFNI True PC9_epitope_Rep3 1037.55458151233 1037.5534899358602 75.558 2 -0.4046624809890011 0.11054749294999656 0.8748459850066359 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant'] 101837 7966 SLPHFPGCAGP True PC9_epitope_Rep2 1081.5015003936498 1081.50040993586 36.006 2 -0.4046697036691606 0.11054749294999656 0.8748535191026813 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62'] 23497 10682 EVVEEGAKEAR True H1975_Epitope_Rep1 1215.6095301891498 1215.6084299358602 46.047 2 -0.40472728988492934 0.11054749294999656 0.8749135862953449 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 87876 9339 QRIDEFEAM-[Oxidation] True PC9_epitope_Rep4 1153.5073740001699 1153.50626993586 43.53 2 -0.40473550815681575 0.11055518302642664 0.87492215835242 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 102154 9360 SLRRHQLSHRP True NCI_RA007_Epitope_Rep2 1385.77524758833 1385.7741499358601 41.018 2 -0.4047547939760629 0.11055518302642664 0.8749422741223185 ['ENSG00000175213|ENST00000311764|ZNF408'] 6793 9784 AQEIEWLPFRC-[Carbamidomethyl] True NCI_RA007_Epitope_Rep1 1447.6918206238997 1447.6907299358602 42.06 2 -0.40479441170635344 0.11055518302642664 0.8749835955482653 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462'] 106465 6807 STKGTSKDP True H1975_Epitope_Rep2 919.4610750503099 919.45996993586 31.101 2 -0.40480266784739516 0.11055518302642664 0.8749922065231757 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7', 'nc|ENSG00000141738|Q14451-2|GRB7'] 11165 23833 DDMGFGLFD True PC9_epitope_Rep1 1015.3956979124299 1015.39460993586 96.472 2 -0.40483946778048663 0.11055518302642664 0.8750305871738275 ['nc|ENSG00000137818|P05386-2|RPLP1', 'ENSG00000137818|ENST00000260379|RPLP1', 'ENST00000487304.6_1_15:69747454-69747843:+|nuORF', 'ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 62837 28561 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 119.64 3 -0.40484629300871655 0.11056857452332239 0.8750377054175494 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 57540 9458 LEDQAGTSLP True PC9_epitope_Rep3 1029.4978544818498 1029.4967499358602 41.325 2 -0.40486260639574295 0.11056857452332239 0.8750547189577542 ['ENST00000472415.1_1_X:153043961-153044491:+|nuORF'] 61262 20887 LIPDIDLKL True PC9_epitope_Rep2 1038.63249747986 1038.6314099358601 85.785 2 -0.4049142867080598 0.11060105907434152 0.875108615458085 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 56808 17712 LDNIELYWNSY True H1975_Epitope_Rep2 1428.6561460284 1428.65504993586 73.45 2 -0.4049548698978834 0.11063354250838132 0.8751509369516449 ['NDRG2|p.L311Cfs*12|1|0.12|ENSG00000165795|chr14:21018005-21018005|G/-|frameshift_variant', 'nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2', 'ENST00000557416.5_1_14:21486655-21488105:-|nuORF'] 1059 7303 AEAGALPAAA True H1975_Epitope_Rep2 840.4341320264799 840.43302993586 33.029 2 -0.4050363305459754 0.11068321699962178 0.8752358814247537 ['ENSG00000086544|ENST00000263370|ITPKC'] 116800 11514 TVEDSVAIP True H1975_Epitope_Rep3 929.4705771048499 929.47002496793 49.414 1 -0.40509489536065396 0.11069660294319901 0.8752969463936368 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|127|2|sense'] 120334 8322 VEEDQDPSCP True PC9_epitope_Rep1 1117.42336921225 1117.4222699358602 36.844 2 -0.40510110900599045 0.11069660294319901 0.8753034250800273 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 133897 16925 VYHMFISI True PC9_epitope_Rep3 1008.5102741722 1008.50916993586 70.258 2 -0.4051100252865682 0.11070808478451462 0.8753127216070726 ['COL25A1|p.E626Sfs*42|1|0.1|ENSG00000188517|chr4:108819299-108819299|C/-|frameshift_variant'] 81827 12716 PLPVPPPTG True PC9_epitope_Rep1 873.49600400705 873.49490993586 53.784 2 -0.40511356493320616 0.11070808478451462 0.8753164121821654 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 116366 9376 TTFQQKIKDK True PC9_epitope_Rep5 1235.68738658703 1235.68573490379 41.02 3 -0.40515123283154586 0.11070808478451462 0.8753556853558712 ['nc|ENSG00000163576|Q8N7U6-3|EFHB', 'ENSG00000163576|ENST00000295824|EFHB', 'nc|ENSG00000163576|Q8N7U6-2|EFHB', 'ENST00000498089.1_1_3:19936277-19975510:-|nuORF'] 12335 5367 DIQREEHHGDP True NCI_RA007_Epitope_Rep2 1331.58544069963 1331.58379490379 25.494 3 -0.405190023993535 0.11072337206903665 0.8753961280095568 ['ENST00000486812.5_1_21:43231104-43231167:-|nuORF'] 15375 8875 EAGVTDEVL True H1975_Epitope_Rep2 931.44984166027 931.4492949679301 39.106 1 -0.4053594904175233 0.11082270430089043 0.8755727893637785 ['ENSG00000169902|ENST00000304842|TPST1', 'ENSG00000128294|ENST00000338754|TPST2'] 29889 10831 FVVDRNTISYY True H1975_Epitope_Rep2 1375.6772158261501 1375.67557490379 46.691 3 -0.4053998502886661 0.11082270430089043 0.8756148579293721 ['ENSG00000181752|ENST00000313447|OR8K5'] 33546 12891 GLEIGSLLLP True NCI_RA007_Epitope_Rep3 1010.6011973515799 1010.60010993586 57.97 2 -0.40562689383454165 0.11088955737000429 0.8758514782496906 ['ENSG00000164897|ENST00000297533|TMUB1'] 62838 28626 LLMCEIPMVEL True H1975_Epitope_Rep2 1289.6433391406897 1289.64169490379 119.98 3 -0.40564423649674697 0.1109048404840484 0.8758695499224319 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 49532 11573 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 49.531 2 -0.4056600971688991 0.11091821650795833 0.8758860769930302 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 78741 4027 PAADGGRGRPW True PC9_epitope_Rep1 1138.5631891334199 1138.56208993586 20.393 2 -0.40568299885698134 0.11091821650795833 0.8759099403798297 ['ENSG00000117419|ENST00000372257|ERI3', 'ENST00000495828.1_1_1:44804991-44820908:-|nuORF'] 15178 8212 EAAVAAVAV True H1975_Epitope_Rep2 799.44396843419 799.44286993586 36.54 2 -0.40573948176993957 0.11095068667388576 0.8759687924437545 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.C638Lfs*2|1|0.17|ENSG00000066735|chr14:104173749-104173750|-/T|frameshift_variant'] 79381 8082 PASPALTAA True PC9_epitope_Rep1 797.42831837005 797.4272299358599 35.912 2 -0.4057701779570369 0.11096406043209983 0.876000774545128 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 46273 12325 ISPKGVDIV True PC9_epitope_Rep2 926.54368247546 926.54258993586 52.721 2 -0.4057719963703328 0.11096406043209983 0.8760026690987519 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 97820 14726 SELLCYFIII True PC9_epitope_Rep6 1212.6464332918401 1212.6453299358602 68.592 2 -0.40584201255523333 0.11097934068956035 0.8760756139115227 ['ENSG00000103335|ENST00000301015|PIEZO1'] 106033 5725 SSYPVCVSK True NCI_RA007_Epitope_Rep5 968.4637179026 968.46262993586 28.709 2 -0.40599857149069707 0.11106336902531667 0.8762386994257241 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1', 'ENST00000549820.1_1_12:113344820-113354315:+|nuORF'] 85442 6011 QEYPPTSPV True H1975_Epitope_Rep3 1016.4814761417199 1016.48036993586 28.134 2 -0.4060265175638619 0.1110786470507356 0.8762678072781505 ['ENST00000530275.2_1_1:39875146-39875419:+|nuORF'] 120639 9695 VEIKDLNDNAP True NCI_RA007_Epitope_Rep1 1226.6142812164198 1226.6131899358602 41.712 2 -0.40614783418399364 0.11110538255310373 0.8763941558019628 ['PCDH19|p.P364Rfs*4|1|0.33|ENSG00000165194|chrX:100407507-100407507|G/-|frameshift_variant', 'PCDH19|p.G824Afs*10|1|0.62|ENSG00000165194|chrX:100402669-100402669|C/-|frameshift_variant', 'nc|ENSG00000165194|Q8TAB3-3|PCDH19', 'nc|ENSG00000165194|Q8TAB3-2|PCDH19', 'ENSG00000165194|ENST00000373034|PCDH19'] 134929 5364 VYYNEATGGK True PC9_epitope_Rep6 1100.5138388991597 1100.51274993586 28.496 2 -0.4061624409494185 0.11110538255310373 0.8764093671493397 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 58207 7778 LELEERERRSP True H1975_Epitope_Rep3 1412.73719031376 1412.73553490379 34.902 3 -0.4061672551728237 0.11110538255310373 0.8764143805759124 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1', 'nc|ENSG00000176049|Q96AA8-2|JAKMIP2', 'nc|ENSG00000176049|Q96AA8|JAKMIP2', 'ENSG00000176049|ENST00000616793|JAKMIP2', 'JAKMIP2|p.R646Efs*8|1|0.2|ENSG00000176049|chr5:147628810-147628810|T/-|frameshift_variant', 'nc|ENSG00000176049|Q96AA8-4|JAKMIP2'] 109688 16252 TEDARTILEL True PC9_epitope_Rep2 1159.6084675599898 1159.60736993586 67.756 2 -0.40616790908282135 0.11110538255310373 0.8764150615411268 ['ENSG00000005189|ENST00000261377|REXO5', 'nc|ENSG00000005189|Q96IC2-2|REXO5'] 77626 8271 NTEPVETSSP True NCI_RA007_Epitope_Rep5 1059.47203365683 1059.47092993586 38.492 2 -0.4062137241862081 0.11113402416181196 0.876462770848687 ['PLXDC2|p.R391P|1|0.24|ENSG00000120594|chr10:20217475-20217475|G/C|missense_variant'] 90172 7675 REDLSRLV True H1975_Epitope_Rep3 986.5508931142199 986.54978993586 34.505 2 -0.4062401672738413 0.11113402416181196 0.8764903059763338 ['ENSG00000185043|ENST00000328649|CIB1', 'nc|ENSG00000185043|Q99828-2|CIB1'] 71621 9099 MDPFNHRIF True NCI_RA007_Epitope_Rep3 1175.5545985956699 1175.5535099358601 42.876 2 -0.40624128989693725 0.11113402416181196 0.8764914749411357 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 102175 15238 SLRTALILH True PC9_epitope_Rep3 1022.62366413166 1022.62256993586 63.761 2 -0.40626082642070055 0.11117793624881862 0.8765118176668306 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 99592 16633 SIEYSIPFPP True PC9_epitope_Rep5 1148.57537652656 1148.57426993586 68.985 2 -0.4062610294399214 0.11117793624881862 0.8765120290613121 ['ENST00000259605.10_1_9:36338912-36339155:-|nuORF'] 19610 19491 ELQQLTLTGFG True H1975_Epitope_Rep1 1205.62920300457 1205.62867496793 81.168 1 -0.40626744433618905 0.11117793624881862 0.8765187085670416 ['ENST00000591340.5_1_19:37039208-37045651:-|nuORF'] 66924 15252 LSNRQRFP True PC9_epitope_Rep2 1016.5515618205599 1016.55046993586 63.941 2 -0.40628932916575766 0.11117793624881862 0.8765414957242715 ['ENST00000472823.5_1_6:29576484-29596894:-|nuORF', 'nc|ENSG00000204681|Q9UBS5-5|GABBR1', 'nc|ENSG00000204681|Q9UBS5-2|GABBR1', 'nc|ENSG00000204681|Q9UBS5-3|GABBR1', 'nc|ENSG00000204681|Q9UBS5-4|GABBR1', 'ENSG00000204681|ENST00000377034|GABBR1'] 116359 9168 TTFAANLLTL True PC9_epitope_Rep4 1063.59136094387 1063.59026993586 42.858 2 -0.40639261829265416 0.11120465987388099 0.8766490350458946 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ATR|p.V1555Efs*36|1|0.04|ENSG00000175054|chr3:142512421-142512448|ATGGTATGCTGATCGTCATGCTTTAGAA/-|frameshift_variant'] 111965 16316 TIQQIETI True PC9_epitope_Rep5 944.51786165044 944.51676993586 67.756 2 -0.4063954500948629 0.11120465987388099 0.8766519831740923 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR'] 4895 8092 ALEYNFPKRIC True H1975_Epitope_Rep1 1352.6910920684797 1352.68998993586 36.071 2 -0.40641778341440654 0.11120465987388099 0.8766752335380807 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF'] 111952 9422 TIQEYQSLK True H1975_Epitope_Rep1 1108.5764391557198 1108.57534993586 41.154 2 -0.4064408018957668 0.11120465987388099 0.8766991965030568 ['ENSG00000176438|ENST00000682763|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-3|SYNE3'] 33605 22138 GLFTFLEAI True NCI_RA007_Epitope_Rep2 1009.5484335027298 1009.54787496793 91.884 1 -0.4065215210212505 0.1112180203089294 0.8767832220552584 ['ENST00000375906.5_1_6:31629762-31629897:-|nuORF'] 62698 23314 LLLLPPVTD True PC9_epitope_Rep2 979.59538369515 979.59428993586 95.153 2 -0.4065301161487026 0.1112180203089294 0.8767921687412592 ['ENST00000341255.3_1_22:44891741-44891837:-|nuORF'] 94303 21152 RRRKEEQRTKE True H1975_Epitope_Rep2 1514.8389700436999 1514.83786993586 87.546 2 -0.4065922694834089 0.11122755776995104 0.8768568613009673 ['L1MA4A_dup2646|chr7:55461716-55462655:-|1.008969920648077|0.4304615177296836|1.23|541.0|2|1|sense'] 42306 13771 IDWNNPAII True PC9_epitope_Rep6 1054.54474510462 1054.54364993586 64.772 2 -0.4066079600174269 0.11122755776995104 0.8768731920297874 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 18079 6685 EIGWETPP True H1975_Epitope_Rep3 927.4337976733099 927.43270993586 30.668 2 -0.40661835296791493 0.11122755776995104 0.8768840088417956 ['nc|ENSG00000172164|Q13884-2|SNTB1', 'ENSG00000172164|ENST00000517992|SNTB1', 'ENST00000519298.1_1_8:121667161-121706140:-|nuORF', 'ENST00000519177.5_1_8:121583594-121823792:-|nuORF'] 67345 13196 LSSGHSSYAI True PC9_epitope_Rep1 1020.4876241513199 1020.48652993586 55.622 2 -0.40663710519962726 0.11122755776995104 0.8769035254830403 ['nc|ENSG00000211637|A0A075B6H9|IGLV4-69'] 33743 9976 GLISEAASPP True H1975_Epitope_Rep1 940.48656152216 940.48601496793 43.31 1 -0.4066760596428339 0.1112390049477735 0.8769440663122839 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555226.1_1_14:81862181-81864726:-|nuORF'] 100779 4072 SLEEEVDREKE True NCI_RA007_Epitope_Rep4 1361.63105347937 1361.6293949037902 21.935 3 -0.40675400762026326 0.1112390049477735 0.8770251823778212 ['nc|ENSG00000171804|Q6ZQQ6|WDR87', 'nc|ENSG00000171804|Q6ZQQ6-2|WDR87', 'ENSG00000171804|ENST00000447313|WDR87'] 91569 25140 RIKAITTC True NCI_RA007_Epitope_Rep1 904.5164221818001 904.51587496793 104.03 1 -0.406786176302294 0.1112390049477735 0.8770586560568168 ['ENSG00000187105|ENST00000553558|HEATR4'] 3994 3997 AHEEDNTVEL True PC9_epitope_Rep4 1155.5043964142699 1155.50275490379 21.608 3 -0.4068024866760908 0.11125427339414867 0.8770756275478276 ['ENSG00000185818|ENST00000423729|NAT8L'] 141465 15814 YTGTPDWLY True H1975_Epitope_Rep2 1114.4971262058598 1114.49657496793 66.015 1 -0.4068192820863906 0.1112695413159251 0.8770931033472235 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 10033 13968 AYRRIHSL True PC9_epitope_Rep1 1014.5722972651399 1014.57120993586 58.566 2 -0.40688904166994744 0.11134969852094893 0.8771656846855611 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3', 'nc|ENSG00000185515|P46736|BRCC3', 'nc|ENSG00000185515|P46736-4|BRCC3'] 94589 18389 RRSRKVGRRA True NCI_RA007_Epitope_Rep3 1240.77010263824 1240.7690099358601 80.52 2 -0.40691794565019374 0.11134969852094893 0.8771957558137006 ['ENST00000392275.1_1_19:30206050-30206326:-|nuORF'] 97796 7740 SELEAQTGL True H1975_Epitope_Rep2 946.4607406971398 946.4596499358599 34.725 2 -0.4069534966503864 0.11134969852094893 0.8772327407460505 ['nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220160899-220172331:-|nuORF'] 18435 9523 EIYFRKGK True H1975_Epitope_Rep1 1039.5814649665099 1039.58036993586 41.552 2 -0.40708026850123175 0.11138214175284296 0.877364611184331 ['ENSG00000172766|ENST00000379406|NAA16'] 71973 4922 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 24.059 2 -0.40709452383880773 0.11141458387013656 0.8773794384061411 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 84356 20611 PYYQPPYTL True PC9_epitope_Rep5 1140.54916177872 1140.5480699358602 84.329 2 -0.4072091288570234 0.11146420228115982 0.8774986303295728 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'TIMM50|p.K284Pfs*24|1|0.05|ENSG00000105197|chr19:39488205-39488206|-/CCTT|frameshift_variant', 'ENST00000595961.5_1_19:39976255-39976534:+|nuORF'] 60986 7550 LIEDLMDP True NCI_RA007_Epitope_Rep1 944.45248451256 944.45138993586 33.362 2 -0.4072471388671575 0.11147946476115224 0.8775381573956951 ['ENSG00000003393|ENST00000264276|ALS2'] 4272 6482 AIFLKWHVP True H1975_Epitope_Rep3 1109.63858591981 1109.63748993586 29.901 2 -0.40728641915336217 0.11151190353498917 0.8775790032006862 ['ENSG00000182450|ENST00000422670|KCNK4', 'nc|ENSG00000182450|Q9NYG8-2|KCNK4'] 9636 8270 AYATHPFKF True NCI_RA007_Epitope_Rep5 1080.53926580136 1080.5381699358602 38.489 2 -0.4074077567672622 0.11154242528340777 0.8777051622668267 ['nc|ENSG00000111912|Q8NI08-5|NCOA7', 'nc|ENSG00000111912|Q8NI08-7|NCOA7', 'nc|ENSG00000111912|Q8NI08-2|NCOA7', 'ENSG00000111912|ENST00000392477|NCOA7'] 36166 17778 GVASLLLSF True H1975_Epitope_Rep1 905.52221875489 905.52167496793 74.003 1 -0.40744422067668884 0.11154242528340777 0.8777430707963992 ['ENSG00000112514|ENST00000488034|CUTA'] 122777 14416 VGGPEIEVG True PC9_epitope_Rep2 855.4337976733099 855.43324496793 60.72 1 -0.40759282081862463 0.11160729621105424 0.8778975373384333 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 101681 6204 SLMDHFHPP True H1975_Epitope_Rep2 1079.48585032951 1079.48474993586 28.837 2 -0.40760973575589193 0.11160729621105424 0.877915117904521 ['ENST00000555842.1_2_14:99958333-99958432:+|nuORF'] 111963 12927 TIQNPSNV True PC9_epitope_Rep3 871.43994568291 871.43884993586 54.748 2 -0.4076251623983136 0.11162255466052934 0.8779311512260195 ['ENSG00000094755|ENST00000265294|GABRP'] 102174 13323 SLRTALILH True PC9_epitope_Rep2 1022.62366413166 1022.62256993586 56.52 2 -0.40768132159534637 0.11163781258587524 0.8779895158827061 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 80870 20866 PHTGQLVSTW True PC9_epitope_Rep3 1124.56145779792 1124.56036993586 85.533 2 -0.40770349655404575 0.11167024474023186 0.8780125603440563 ['ENST00000435881.6_1_17:40723685-40723811:+|nuORF'] 47013 9435 ITQVKSKHLKD True NCI_RA007_Epitope_Rep2 1295.7561348531897 1295.7550299358602 41.311 2 -0.40776966944324267 0.11170267578057912 0.8780813233961451 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 109272 5190 TATTNISVVP True NCI_RA007_Epitope_Rep3 1001.5393253710099 1001.53822993586 27.412 2 -0.40783870488284224 0.11172934913274944 0.8781530537495569 ['ENST00000517764.1_1_8:94934348-94934420:+|nuORF'] 131659 10605 VTLTSLDI True PC9_epitope_Rep6 860.485498893 860.48440993586 51.61 2 -0.40784978763650803 0.11172934913274944 0.8781645684392625 ['ENSG00000175224|ENST00000683050|ATG13', 'nc|ENSG00000175224|O75143-4|ATG13', 'nc|ENSG00000175224|O75143-2|ATG13', 'nc|ENSG00000175224|O75143|ATG13', 'nc|ENSG00000175224|O75143-3|ATG13'] 99929 11043 SINFWYGFCVP True H1975_Epitope_Rep2 1331.6008800817501 1331.59924490379 47.507 3 -0.40787088290566165 0.11172934913274944 0.8781864853339311 ['ENSG00000181616|ENST00000322653|OR52H1'] 135191 6337 WERKYREWYEK True NCI_RA007_Epitope_Rep1 1671.8157749876298 1671.81357987172 28.675 4 -0.4078885512429455 0.11172934913274944 0.8782048412822643 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 137909 10937 YEYARRRFTER True H1975_Epitope_Rep3 1545.7800581852496 1545.77896993586 47.156 2 -0.4079663075513944 0.11174460338994693 0.8782856177994737 ['ENST00000463900.5_1_2:74753929-74756164:-|nuORF', 'ENSG00000115307|ENST00000377526|AUP1'] 137032 14948 YALPRYSYSF True PC9_epitope_Rep5 1265.6080736371703 1265.60641490379 62.499 3 -0.4079894858231724 0.11175985712323121 0.8783096944967189 ['OR9G1|p.S263Y|1|0.07|ENSG00000174914|chr11:56701175-56701175|C/A|missense_variant'] 118889 13327 VADDLTQNT True PC9_epitope_Rep1 975.4509042894301 975.44980993586 56.122 2 -0.4080162125112822 0.11177511033262927 0.8783374560845224 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 126278 24570 VLHRRRRANAF True NCI_RA007_Epitope_Rep5 1394.8119674502198 1394.8108699358602 101.98 2 -0.40817535995380194 0.11185905141326373 0.8785027421071852 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7', 'F7|p.E325Rfs*6|1|0.65|ENSG00000057593|chr13:113118576-113118577|-/C|frameshift_variant'] 47791 15509 IYFKKPLNI True PC9_epitope_Rep5 1134.68011637862 1134.67846490379 64.665 3 -0.4082121947659396 0.11187430239546664 0.8785409918297908 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 135635 14349 WLLKALQQF True PC9_epitope_Rep1 1145.6597152872098 1145.65807490379 60.017 3 -0.4082716544209265 0.11190288128026374 0.8786027307707508 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22', 'nc|ENSG00000187048|Q02928-2|CYP4A11', 'ENSG00000187048|ENST00000310638|CYP4A11'] 78630 9371 NYTARFSRF True PC9_epitope_Rep6 1160.57269118796 1160.5710449037902 46.237 3 -0.4083016418405295 0.11190288128026374 0.8786338654974969 ['ENSG00000144231|ENST00000272645|POLR2D'] 36869 22581 GVLLIHPKTKD True NCI_RA007_Epitope_Rep2 1219.72885747619 1219.7277699358601 93.949 2 -0.4083159835120958 0.11190288128026374 0.8786487553501436 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'ENST00000496841.5_1_2:128393248-128394989:+|nuORF', 'ENST00000494959.1_1_2:128392149-128394989:+|nuORF', 'ENST00000491278.5_1_2:128392149-128394989:+|nuORF'] 46654 6962 ITDNPGLQ True PC9_epitope_Rep6 856.42904664604 856.4279499358599 35.731 2 -0.4083856569315236 0.11198489010989011 0.8787210870342088 ['ENSG00000150261|ENST00000279783|OR8K1', 'OR8K1|p.G78Vfs*11|1|0.28|ENSG00000150261|chr11:56346267-56346267|C/-|frameshift_variant'] 58817 9764 LESPNPENKDY True H1975_Epitope_Rep1 1304.5884603914 1304.5868249037899 42.487 3 -0.4083872961945629 0.11198489010989011 0.8787227887431398 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L', 'nc|ENSG00000071537|Q9UBV2-2|SEL1L'] 142041 6036 YVLMDGDH True NCI_RA007_Epitope_Rep3 948.4011176460399 948.40002993586 30.721 2 -0.40845913102836456 0.112017307395134 0.8787973556456177 ['FAT2|p.A968D|1|0.14|ENSG00000086570|chr5:151566029-151566029|G/T|missense_variant'] 102637 5664 SLWRYFMKR True NCI_RA007_Epitope_Rep4 1285.67538243469 1285.67374490379 28.393 3 -0.40858572355750267 0.11208213862610099 0.8789287418425195 ['FIGN|p.R641W|1|0.06|ENSG00000182263|chr2:163609911-163609911|G/A|missense_variant'] 126279 25346 VLHRRRRANAF True PC9_epitope_Rep5 1394.8119674502198 1394.8108699358602 102.7 2 -0.40863313255153905 0.11208213862610099 0.8789779391603103 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7', 'F7|p.E325Rfs*6|1|0.65|ENSG00000057593|chr13:113118576-113118577|-/C|frameshift_variant'] 66910 12451 LSNNKIQAL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 52.758 2 -0.4087335199064423 0.1121087781344962 0.8790821007842742 ['ENSG00000164342|ENST00000296795|TLR3'] 68859 9843 LTMRLWHVLT True NCI_RA007_Epitope_Rep2 1268.7063482098 1268.7052499358601 42.912 2 -0.40877556191180275 0.1121087781344962 0.8791257184057192 ['ENST00000495528.1_1_10:17275586-17275664:+|nuORF'] 14588 8739 DTWESLQK True PC9_epitope_Rep5 1005.47672511445 1005.47562993586 38.557 2 -0.40878835596927543 0.1121087781344962 0.8791389913570432 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 43112 5636 IEYEYKPN True NCI_RA007_Epitope_Rep5 1054.49712620586 1054.4960299358602 28.366 2 -0.40880199235246284 0.1121087781344962 0.8791531378590899 ['CNRIP1|p.C147Y|1|0.06|ENSG00000119865|chr2:68293917-68293917|C/T|missense_variant'] 100008 10101 SIQDALPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 46.824 2 -0.40883020242223184 0.11212017167381974 0.8791824022333844 ['ENST00000569758.1_1_15:75646945-75647372:+|nuORF'] 43552 14460 IGRFLPASP True PC9_epitope_Rep5 956.5443511817998 956.54324993586 60.62 2 -0.4088436600221205 0.11212017167381974 0.87919636231512 ['ENSG00000146263|ENST00000683635|MMS22L'] 67961 9341 LTDDSDTPTLY True H1975_Epitope_Rep2 1239.5506779003501 1239.54958993586 40.892 2 -0.4088635597245226 0.11212017167381974 0.8792170044745279 ['USP32|p.F181L|1|0.05|ENSG00000170832|chr17:60288551-60288551|G/C|missense_variant'] 23655 10263 EYADSENSSFY True H1975_Epitope_Rep3 1310.4938913002202 1310.4927899358602 44.526 2 -0.4088742886618983 0.11213541398430928 0.8792281334302183 ['ACKR2|p.D14Y|1|0.2|ENSG00000144648|chr3:42864542-42864542|G/T|missense_variant'] 101974 7360 SLQHPNVL True PC9_epitope_Rep2 906.49231560894 906.49120993586 33.692 2 -0.4088972665261111 0.11215065577147566 0.8792519673471751 ['ENSG00000142235|ENST00000600059|LMTK3'] 60294 12012 LGSAVSLTI True NCI_RA007_Epitope_Rep5 859.50148331031 859.50038993586 52.864 2 -0.4089543246879503 0.11216397157276753 0.8793111473743616 ['ENSG00000149534|ENST00000278888|MS4A2'] 47012 8966 ITQVKSKHLKD True H1975_Epitope_Rep3 1295.7561348531897 1295.7550299358602 39.484 2 -0.4089851115879488 0.11216397157276753 0.8793430768773088 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 119872 7899 VDFTEMPK True H1975_Epitope_Rep1 965.4528188657299 965.45172993586 35.336 2 -0.40904507482691355 0.112213543901811 0.8794052609280759 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|8|1|sense', 'HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|38|1|sense'] 130086 20629 VSDLALQNA True PC9_epitope_Rep2 929.4818104948899 929.48070993586 84.783 2 -0.4091342638446316 0.1122459489151332 0.8794977418522745 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 121527 8189 VFAIGQVK True NCI_RA007_Epitope_Rep2 860.51198842436 860.51088993586 36.49 2 -0.40925379741583084 0.11232984877353794 0.8796216660402784 ['ENST00000536573.6_1_12:1213918-1353789:+|nuORF'] 57156 6676 LDTRGELQAA True NCI_RA007_Epitope_Rep3 1072.5512870370399 1072.55018993586 33.341 2 -0.409371270322494 0.11234122897356677 0.879743430036849 ['ENSG00000129028|ENST00000249861|THAP10'] 44457 5206 ILKKPPSP True H1975_Epitope_Rep2 878.5589386167799 878.55784993586 25.096 2 -0.4093889934301834 0.11234122897356677 0.8797617984833428 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B', 'INPP4B|p.K530Rfs*3|1|0.13|ENSG00000109452|chr4:142145971-142145971|T/-|frameshift_variant'] 127057 14598 VLSSAGFEAI True PC9_epitope_Rep1 992.51786165044 992.51676993586 60.974 2 -0.4094313169695389 0.11234122897356677 0.8798056609337496 ['nc|ENSG00000177752|Q8N8F6-2|YIPF7'] 29132 9362 FTMFNRRHHCR True NCI_RA007_Epitope_Rep1 1503.7088249046299 1503.70772993586 40.409 2 -0.40950612139335385 0.11236977155312977 0.8798831777486422 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF'] 115891 7113 TSETFPEAYKP True NCI_RA007_Epitope_Rep1 1268.5924831426796 1268.5908449037902 31.658 3 -0.40950956772526725 0.11236977155312977 0.8798867488112067 ['ENSG00000168421|ENST00000381799|RHOH'] 27076 21556 FLGALWLAL True PC9_epitope_Rep5 1002.59023874506 1002.58914993586 87.953 2 -0.40951590433955065 0.11236977155312977 0.8798933147085827 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 106599 19016 STPLKLIGV True PC9_epitope_Rep1 926.5800679841799 926.57896993586 77.934 2 -0.4096475774927887 0.11241141445167047 0.8800297365963028 ['ENSG00000154319|ENST00000284486|FAM167A', 'FAM167A|p.L192I|1|0.12|ENSG00000154319|chr8:11424444-11424444|G/T|missense_variant', 'ENST00000531564.1_1_8:11281884-11301161:-|nuORF'] 98217 8439 SETPPVPPPP True H1975_Epitope_Rep2 1016.5178616504398 1016.51676993586 37.411 2 -0.40971002998202144 0.11241141445167047 0.8800944309063248 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 49920 6010 KIKSWANK True NCI_RA007_Epitope_Rep4 973.5709002828099 973.56980993586 29.736 2 -0.4097238134155495 0.11241141445167047 0.8801087082036676 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 20143 8385 ENDIRSCSLA True H1975_Epitope_Rep3 1106.50262259246 1106.5015299358602 37.236 2 -0.409764093974531 0.11241141445167047 0.8801504301324006 ['VAV3|p.C196S|1|0.28|ENSG00000134215|chr1:107770697-107770697|C/G|missense_variant'] 131164 6107 VTEISREVV True NCI_RA007_Epitope_Rep1 1030.56587447202 1030.56476993586 27.792 2 -0.4097680536245176 0.11241141445167047 0.8801545313192451 ['ENSG00000121931|ENST00000369763|LRIF1'] 142318 13172 YYDPKHVIF True PC9_epitope_Rep6 1180.59169529704 1180.5900449037902 62.31 3 -0.4097726963574552 0.11241141445167047 0.8801593399709498 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 83272 6364 PTANLDRSNDK True H1975_Epitope_Rep3 1229.6000281346103 1229.59892993586 29.463 2 -0.4097847359056935 0.11241141445167047 0.8801718096054257 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2', 'nc|ENSG00000169398|Q05397-2|PTK2'] 142482 16187 YYIAGSLSTL True PC9_epitope_Rep2 1086.55972646242 1086.5586299358602 67.516 2 -0.4097855439557685 0.11241141445167047 0.8801726465122671 ['HAT1|p.M86L|1|0.11|ENSG00000128708|chr2:171952948-171952948|A/C|missense_variant'] 98505 18985 SFLFHDII True PC9_epitope_Rep5 990.51746772762 990.51636993586 78.051 2 -0.4097985012271251 0.11241141445167047 0.8801860663533182 ['ENST00000238831.8_1_2:32517356-32517413:+|nuORF'] 14623 22508 DVAVVLCLLL True PC9_epitope_Rep2 1056.62530392444 1056.62420993586 92.066 2 -0.4098374648598124 0.11241141445167047 0.880226419210764 ['ENST00000492310.5_1_7:43153648-43477745:+|nuORF'] 14583 8697 DTWESLQK True PC9_epitope_Rep1 1005.47672511445 1005.47562993586 38.293 2 -0.40992065567868796 0.11241141445167047 0.8803125672835971 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 12884 16524 DLILNITYKKK True NCI_RA007_Epitope_Rep1 1347.8125871001496 1347.8114899358602 68.389 2 -0.4099622817858954 0.11241141445167047 0.8803556685692232 ['ENST00000450155.5_1_1:112142544-112147029:-|nuORF', 'ENST00000441004.5_1_1:112142544-112147029:-|nuORF'] 5730 12369 APAPPVYEA True PC9_epitope_Rep3 913.4545331178899 913.45342993586 52.607 2 -0.40998801922787154 0.11241141445167047 0.8803823165974558 ['SIN3A|p.T848Qfs*29|1|0.32|ENSG00000169375|chr15:75392552-75392552|G/-|frameshift_variant', 'ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P162Rfs*4|1|0.1|ENSG00000169375|chr15:75413034-75413035|GG/-|frameshift_variant', 'ENST00000568919.1_1_15:75722503-75722716:-|nuORF', 'SIN3A|p.P107Hfs*15|1|0.34|ENSG00000169375|chr15:75422693-75422693|G/-|frameshift_variant'] 81829 12517 PLPVPPPTG True PC9_epitope_Rep2 873.49600400705 873.49490993586 53.454 2 -0.40999067710122883 0.11241141445167047 0.8803850684398196 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 78793 6408 PAAPRQVPV True PC9_epitope_Rep5 933.5396001545298 933.53850993586 29.626 2 -0.41009461868493835 0.11244380383678232 0.8804926751573552 ['ENST00000478344.6_1_9:140240296-140248823:-|nuORF', 'nc|ENSG00000187609|Q8N9H8-2|EXD3', 'ENST00000487745.5_1_9:140201404-140247406:-|nuORF', 'ENSG00000187609|ENST00000340951|EXD3'] 16413 16312 EEKGWRRRRWR True H1975_Epitope_Rep3 1613.8763586119298 1613.8752699358602 68.218 2 -0.4101045765832244 0.11245903327098955 0.8805029831900204 ['ENST00000597330.1_1_19:58557520-58558126:+|nuORF'] 15556 7271 EAQAELQKRDE True NCI_RA007_Epitope_Rep2 1315.63680756615 1315.6357099358602 32.903 2 -0.4101943520885114 0.11250085786836868 0.8805959074566552 ['nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 31252 10941 GDENINVLDL True H1975_Epitope_Rep1 1100.5349682665599 1100.53437496793 47.048 1 -0.4102068782485902 0.11250085786836868 0.880608871827061 ['ENSG00000174145|ENST00000309447|NWD2'] 127620 21027 VPAAAFSDVL True PC9_epitope_Rep3 988.5229470308799 988.52184993586 86.158 2 -0.41021355381074703 0.11250085786836868 0.8806157808114605 ['ENSG00000174282|ENST00000380599|ZBTB4'] 120019 13633 VDRQSITL True PC9_epitope_Rep5 930.5134449763399 930.51234993586 57.463 2 -0.410233112904473 0.11250085786836868 0.8806360233690785 ['ENST00000584519.5_1_17:15881363-15902918:-|nuORF', 'ENSG00000214941|ENST00000399277|ZSWIM7'] 97114 4726 SDKPLIQDSD True NCI_RA007_Epitope_Rep5 1116.52988288612 1116.52878993586 24.862 2 -0.41025580407387396 0.11250085786836868 0.8806595066019925 ['ENSG00000128915|ENST00000261520|ICE2'] 82051 9691 PLYHVTEKP True NCI_RA007_Epitope_Rep4 1082.5760452329 1082.57494993586 44.126 2 -0.4102724039631175 0.11251415434238067 0.880676685355016 ['NKAIN4|p.N193T|1|0.05|ENSG00000101198|chr20:63242578-63242578|T/G|missense_variant'] 55882 20716 LAQAELPAI True PC9_epitope_Rep5 924.5280324113199 924.52692993586 84.742 2 -0.4103071381481973 0.11251415434238067 0.8807126291988883 ['ENSG00000135744|ENST00000366667|AGT'] 131322 17557 VTGKPDAETL True PC9_epitope_Rep6 1029.5342399905699 1029.5331499358601 80.172 2 -0.4103591768931893 0.11252744990392534 0.880766476259141 ['ENSG00000196611|ENST00000315274|MMP1'] 65723 11848 LSCLGCKI True PC9_epitope_Rep2 835.42958132335 835.42848993586 50.902 2 -0.4103622175112538 0.11252744990392534 0.8807696223885543 ['ENSG00000080166|ENST00000377028|DCT', 'nc|ENSG00000080166|P40126-2|DCT', 'DCT|p.V186Cfs*9|1|0.17|ENSG00000080166|chr13:94468785-94468786|-/A|frameshift_variant', 'ENST00000472871.1_1_13:95120883-95131509:-|nuORF'] 104745 8799 SQVNATACAVP True H1975_Epitope_Rep1 1059.5018943164698 1059.5007899358602 38.771 2 -0.41042896478186625 0.11255790015440041 0.880838681700993 ['ENST00000594259.1_1_19:39406248-39406585:-|nuORF'] 67269 22731 LSRRHMKV True PC9_epitope_Rep1 1025.59165281073 1025.59054993586 92.239 2 -0.41048635099567765 0.11255790015440041 0.8808980493769795 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 92813 6836 RPAPQIQYRRL True PC9_epitope_Rep5 1396.80515073428 1396.8034949037901 31.266 3 -0.41053932685248884 0.11259027980305708 0.8809528492128165 ['ENSG00000197696|ENST00000360476|NMB'] 46233 3951 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 20.328 2 -0.4105808542584311 0.11263981335346188 0.8809958029273873 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 63381 10682 LLVENIERE True H1975_Epitope_Rep3 1113.6029882567298 1113.60188993586 46.164 2 -0.41059557862665336 0.11265117076936272 0.8810110322830925 ['nc|ENSG00000116205|Q96MN5-2|TCEANC2', 'ENSG00000116205|ENST00000234827|TCEANC2'] 141723 6120 YTVWNFVP True H1975_Epitope_Rep2 1024.5018176634799 1024.5007299358601 28.519 2 -0.41060168583889567 0.11265117076936272 0.8810173488349892 ['ENSG00000058063|ENST00000323116|ATP11B'] 8908 9204 AVFPSIVGRPR True NCI_RA007_Epitope_Rep4 1197.69822605425 1197.6965849037902 42.251 3 -0.4106021257265877 0.11265117076936272 0.8810178037983386 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 36118 20467 GVAIPLPGV True PC9_epitope_Rep4 821.50108938749 821.5005449679301 86.872 1 -0.41071012575008703 0.11271785371209002 0.8811294946910903 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 65078 14375 LQLKKEEFQ True PC9_epitope_Rep2 1161.6393737654498 1161.63826993586 60.554 2 -0.41095317785549845 0.11276544649902226 0.8813807765182581 ['ENST00000421315.1_1_6:74000735-74000831:+|nuORF'] 6600 4952 APVSGGVGA True PC9_epitope_Rep4 713.37080349393 713.37025496793 25.651 1 -0.4109900988070791 0.11276544649902226 0.8814189383041544 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 74551 5027 NFSTHQRVHT True NCI_RA007_Epitope_Rep4 1225.59521753769 1225.59358490379 25.824 3 -0.4110475184556642 0.11279781814439356 0.8814782828113338 ['nc|ENSG00000103199|O60304-2|ZNF500', 'ENSG00000103199|ENST00000219478|ZNF500'] 5809 10550 APEEQLKAP True PC9_epitope_Rep1 981.5131106231697 981.51200993586 45.471 2 -0.4110538205431606 0.11281110101027426 0.881484795798373 ['ENSG00000243708|ENST00000458483|PLA2G4B', 'nc|ENSG00000243708|P0C869-8|PLA2G4B', 'nc|ENSG00000243708|P0C869-7|PLA2G4B', 'nc|ENSG00000243708|P0C869-6|PLA2G4B', 'ENST00000487292.1_3_15:42132349-42136005:+|nuORF', 'ENST00000491746.5_1_15:42132349-42135875:+|nuORF', 'ENST00000490848.5_1_15:42132349-42134687:+|nuORF'] 130577 7073 VSRVKRMQK True H1975_Epitope_Rep2 1130.6706314074197 1130.66899490379 32.135 3 -0.41105751130445356 0.11281110101027426 0.8814886100377303 ['ENSG00000034053|ENST00000683413|APBA2'] 113623 10621 TLVSSVLP True NCI_RA007_Epitope_Rep1 814.48001958974 814.47892993586 45.301 2 -0.4110948406741258 0.11284347020685397 0.8815271869121781 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD', 'ENST00000470006.1_1_3:48716398-48717131:-|nuORF'] 100887 7445 SLESYQNLNP True NCI_RA007_Epitope_Rep2 1163.54586730343 1163.5447699358601 33.585 2 -0.41116945862959775 0.11284707335059768 0.8816042909437762 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'SENP7|p.H452Lfs*5|1|0.16|ENSG00000138468|chr3:101364955-101364956|-/AGTAGTTTGA|frameshift_variant'] 102716 7898 SMENSGHS True NCI_RA007_Epitope_Rep4 847.3130309176299 847.31192993586 37.114 2 -0.4111798558673264 0.11284707335059768 0.8816150337883459 ['ENSG00000080298|ENST00000617270|RFX3', 'nc|ENSG00000080298|P48380-3|RFX3', 'nc|ENSG00000080298|P48380-2|RFX3'] 91481 24417 RHRRRLRRRPA True NCI_RA007_Epitope_Rep1 1528.95119531804 1528.9500899358602 101.18 2 -0.4112199823282798 0.11284707335059768 0.8816564922212312 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1', 'ENST00000533005.5_1_11:67811756-67818283:+|nuORF'] 36120 19304 GVAIPLPGV True PC9_epitope_Rep6 821.50108938749 821.49998993586 86.9 2 -0.41125567486288966 0.11284707335059768 0.8816933670857103 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 94140 19017 RRMMWTWKP True PC9_epitope_Rep6 1290.6477877878597 1290.64615490379 85.792 3 -0.41131758800612955 0.11284707335059768 0.8817573256246982 ['ENST00000402497.5_1_7:50742328-50860967:-|nuORF', 'ENST00000335866.7_1_7:50742328-50823651:-|nuORF'] 79033 15592 PALICLHPLFI True PC9_epitope_Rep2 1235.71003660791 1235.7089299358602 65.25 2 -0.41135372118771485 0.11284707335059768 0.8817946492912786 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 112105 11010 TIVPTTDIEP True NCI_RA007_Epitope_Rep5 1084.56520576568 1084.5641099358602 48.984 2 -0.41141349369027214 0.11284707335059768 0.8818563858919362 ['ENSG00000154175|ENST00000471714|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0-4|ABI3BP'] 76732 18389 NQVALPNI True PC9_epitope_Rep2 867.48141657207 867.48030993586 76.065 2 -0.41142929741137696 0.11285648140208873 0.8818727078244377 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 121204 17696 VESPSHSREPP True PC9_epitope_Rep1 1220.57856441404 1220.57746993586 72.863 2 -0.4114414173517416 0.11285648140208873 0.8818852248736411 ['ENST00000591030.5_1_19:6477238-6481723:-|nuORF'] 9934 6519 AYMEEVKEEVK True NCI_RA007_Epitope_Rep1 1353.64861811981 1353.64696490379 29.372 3 -0.4114532873013756 0.11285648140208873 0.8818974834805307 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509255.1_1_5:134109490-134113463:+|nuORF'] 79554 20968 PDDYKFSV True PC9_epitope_Rep5 969.4443623570099 969.44326993586 85.714 2 -0.41147809208218533 0.11285648140208873 0.8819230996101074 ['nc|nan|Q8ND61-2|C3orf20', 'ENSG00000131379|ENST00000253697|C3orf20'] 87270 12488 QPNSGLLQA True PC9_epitope_Rep5 926.4821448480599 926.48104993586 53.034 2 -0.4115393848683096 0.11286782358186433 0.8819863924071527 ['ZCCHC17-SERINC2|1|fusion', 'ENST00000491976.1_1_1:31888748-31907043:+|nuORF', 'ENSG00000168528|ENST00000373709|SERINC2', 'nc|ENSG00000168528|Q96SA4-3|SERINC2', 'nc|ENSG00000168528|Q96SA4-2|SERINC2', 'nc|ENSG00000168528|Q96SA4-4|SERINC2'] 105642 17590 SSEDVNSCYY True H1975_Epitope_Rep2 1165.42336921225 1165.4222699358602 72.974 2 -0.411540697014366 0.11286782358186433 0.8819877472937512 ['ZP4|p.E175D|1|0.15|ENSG00000116996|chr1:237888386-237888386|C/A|missense_variant'] 92168 24466 RLFLVHPRIL True NCI_RA007_Epitope_Rep2 1262.7975461726999 1262.7964499358602 102.78 2 -0.41154662303802686 0.11286782358186433 0.8819938663064384 ['ENST00000512310.1_1_5:72747670-72747820:+|nuORF'] 21929 11455 ESDVGVVVY True H1975_Epitope_Rep1 965.47057710485 965.47002496793 49.042 1 -0.4116057328640704 0.11291539490380328 0.8820548975926743 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 131831 3979 VTQQSEKHLEK True NCI_RA007_Epitope_Rep2 1325.6939285194496 1325.6922749037901 20.114 3 -0.4116336266284269 0.11291539490380328 0.8820836958571956 ['nc|ENSG00000143493|Q9NVH2-3|INTS7', 'nc|ENSG00000143493|Q9NVH2-2|INTS7', 'ENSG00000143493|ENST00000366994|INTS7'] 86510 7144 QLAIAKDEAEK True NCI_RA007_Epitope_Rep1 1214.65066672514 1214.6495699358602 31.779 2 -0.4116364744261232 0.1129228606210243 0.8820866359187377 ['ENSG00000109689|ENST00000467087|STIM2', 'nc|ENSG00000109689|Q9P246-3|STIM2'] 55531 13436 LAGPALSTVP True H1975_Epitope_Rep2 924.52803241132 924.52692993586 56.815 2 -0.41165279190568066 0.1129228606210243 0.8821034817691741 ['ENSG00000163788|ENST00000296088|SNRK'] 12539 16482 DKLNNLVLFDK True PC9_epitope_Rep4 1317.7292513990099 1317.72760490379 71.369 3 -0.41166676575023314 0.1129228606210243 0.8821179077062545 ['ENSG00000118181|ENST00000527673|RPS25'] 128440 21565 VPRWLRPWW True PC9_epitope_Rep6 1294.7087311683 1294.70762993586 95.826 2 -0.4116747003911305 0.1129228606210243 0.882126098894556 ['ENST00000481206.1_1_14:105935538-105936549:+|nuORF'] 101783 6807 SLPAGQTEPQP True NCI_RA007_Epitope_Rep3 1123.55095268387 1123.54984993586 33.88 2 -0.41169895894558606 0.1129228606210243 0.8821511410707074 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11', 'ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 30542 4537 GAGQSVADLNP True H1975_Epitope_Rep2 1027.4934378077498 1027.4923499358601 22.561 2 -0.41179720781386325 0.11295327903986284 0.8822525525525964 ['ENST00000433126.1_1_20:61294700-61296403:-|nuORF'] 71172 16918 LYMRIRDNW True PC9_epitope_Rep1 1265.6339115455298 1265.63227490379 69.9 3 -0.41180963735443804 0.11295327903986284 0.8822653809263807 ['ENSG00000172296|ENST00000399002|SPTLC3', 'ENSG00000100596|ENST00000216484|SPTLC2', 'ENST00000557566.1_1_14:78045296-78063654:-|nuORF'] 12538 17186 DKLLIRYEKLP True NCI_RA007_Epitope_Rep2 1386.8234861370197 1386.8223899358602 71.589 2 -0.4118924949163348 0.11300277749202757 0.8823508898713069 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant'] 95153 9368 RVFVVGVGMTK True NCI_RA007_Epitope_Rep2 1191.67979910879 1191.67870993586 41.048 2 -0.41197914475655495 0.11305033603072281 0.882440298819331 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 101903 18419 SLPSWSCSLSI True PC9_epitope_Rep2 1178.56416021986 1178.56306993586 76.179 2 -0.4119874898795211 0.11305033603072281 0.8824489089313626 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 117970 13751 TYARYRYP True PC9_epitope_Rep1 1088.5403284305198 1088.53922993586 57.737 2 -0.41203138315496685 0.11308074747128408 0.8824941938498572 ['nc|ENSG00000135454|Q00973-2|B4GALNT1', 'B4GALNT1|p.F523Sfs*8|1|0.27|ENSG00000135454|chr12:57626780-57626780|G/-|frameshift_variant', 'ENSG00000135454|ENST00000341156|B4GALNT1', 'B4GALNT1|p.G508A|1|0.31|ENSG00000135454|chr12:57626823-57626823|C/G|missense_variant', 'ENST00000553142.5_1_12:58020529-58021701:-|nuORF'] 127967 11240 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 48.243 2 -0.41205448917112497 0.11308074747128408 0.8825180310041861 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 117154 21072 TVLATVLEL True PC9_epitope_Rep6 957.5746482505699 957.57354993586 93.877 2 -0.4121213274236818 0.11309595240952496 0.8825869785980633 ['ENSG00000176387|ENST00000326152|HSD11B2'] 58873 7169 LETAAPAPRPY True NCI_RA007_Epitope_Rep1 1184.61897267404 1184.6178699358602 31.875 2 -0.41221069894272916 0.11311115682644175 0.8826791575430605 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 15947 9817 EDPAAAFTLP True NCI_RA007_Epitope_Rep1 1030.49712620586 1030.4960299358602 42.189 2 -0.412235781635138 0.1131244214351836 0.8827050254713555 ['XKR4|p.R614Efs*8|1|0.33|ENSG00000206579|chr8:55524113-55524113|C/-|frameshift_variant', 'ENSG00000206579|ENST00000327381|XKR4'] 80497 20133 PGLWGLAA True PC9_epitope_Rep5 783.4279244472299 783.4273749679301 82.489 1 -0.41223650246347177 0.1131244214351836 0.8827057688484345 ['ENST00000578846.5_1_17:80019305-80021015:-|nuORF'] 69117 5242 LTRIRPRRLLR True NCI_RA007_Epitope_Rep2 1448.95281802748 1448.9511749037902 25.011 3 -0.4123221488590974 0.11315482720789907 0.8827940874732391 ['ENST00000483554.1_1_17:27043919-27044341:-|nuORF'] 88697 6039 QTHGPPSP True H1975_Epitope_Rep2 819.38751618723 819.38640993586 28.207 2 -0.4123253704497646 0.11315482720789907 0.8827974093111373 ['SOX8|p.T226S|1|0.23|ENSG00000005513|chr16:984721-984721|A/T|missense_variant'] 137864 9232 YESSTASALVA True NCI_RA007_Epitope_Rep5 1097.52406922969 1097.52347496793 42.16 1 -0.41243391842577243 0.11325540739725089 0.8829093235988646 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 63244 16734 LLSLGRRTL True PC9_epitope_Rep3 1027.65021323267 1027.64910993586 69.506 2 -0.4124479210084974 0.11325540739725089 0.8829237588168144 ['ENST00000425075.6_1_5:137289987-137295325:-|nuORF'] 44096 5261 IINGKVGG True PC9_epitope_Rep3 756.4493881677998 756.44828993586 25.316 2 -0.41246987464590706 0.11325540739725089 0.8829463900074689 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 10868 8558 CVTKYYRWMQK True NCI_RA007_Epitope_Rep1 1504.73191133464 1504.7302649037902 37.292 3 -0.41254362561917446 0.11325540739725089 0.8830224104888027 ['nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3'] 1048 6833 AEAEQEKDQLR True H1975_Epitope_Rep1 1315.6368075661499 1315.6351649037902 31.327 3 -0.41254706965308546 0.11325540739725089 0.8830259602533661 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 122623 8498 VGFSGYAP True PC9_epitope_Rep1 796.3755545211999 796.37444993586 37.522 2 -0.41257565122087386 0.11325540739725089 0.8830554183997736 ['ENST00000355803.8_1_16:1376147-1376570:+|nuORF'] 125835 11349 VLADVIDN True NCI_RA007_Epitope_Rep4 857.44944773745 857.4488949679301 50.561 1 -0.4126056311082393 0.11325540739725089 0.8830863160899954 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 20404 6182 EPDDHEKRIP True H1975_Epitope_Rep1 1234.59421447818 1234.5931099358602 28.848 2 -0.4126116485784094 0.11325540739725089 0.8830925175736106 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-3|GCFC2', 'nc|ENSG00000005436|P16383-4|GCFC2'] 117485 17979 TVRDVKLL True PC9_epitope_Rep5 942.5862159937799 942.58510993586 74.174 2 -0.41266755785866116 0.11325540739725089 0.8831501332710936 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000540191.1_1_12:122012416-122017978:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 63943 7665 LNSLAQEILP True H1975_Epitope_Rep1 1096.61282466444 1096.61172993586 34.455 2 -0.4127141165013632 0.11325540739725089 0.8831981084125751 ['AluJr_dup39110|chr8:143020241-143020533:-|1.401957290416243|0.0573479168884429|4.61|538.0|15|2|anti-sense'] 52737 17888 KMLEEIRSP True PC9_epitope_Rep2 1101.58523001761 1101.5841299358601 74.109 2 -0.412864496734427 0.11333916053953073 0.8833530356452807 ['LAMA4|p.R433P|1|0.27|ENSG00000112769|chr6:112175372-112175372|C/G|missense_variant'] 56437 12603 LDEIIFFAYVP True NCI_RA007_Epitope_Rep1 1325.69074063197 1325.6896499358602 53.005 2 -0.41295287367007394 0.11337149516692946 0.8834440646851912 ['ENSG00000133962|ENST00000256343|CATSPERB', 'nc|ENSG00000133962|Q9H7T0-2|CATSPERB'] 87143 8758 QPEKPSLP True H1975_Epitope_Rep2 894.4810822188999 894.47998993586 38.651 2 -0.4129643444594412 0.11338669043171262 0.8834558786067983 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32'] 135636 14317 WLLKALQQF True PC9_epitope_Rep5 1145.6597152872098 1145.65807490379 60.072 3 -0.41308456847558495 0.11341513572799561 0.883579683786409 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22', 'nc|ENSG00000187048|Q02928-2|CYP4A11', 'ENSG00000187048|ENST00000310638|CYP4A11'] 44354 7709 ILEANMDIVYK True H1975_Epitope_Rep2 1307.6795243252698 1307.67842993586 34.608 2 -0.4130875858201678 0.11341513572799561 0.8835827906532557 ['ENSG00000050393|ENST00000379170|MCUR1'] 20471 21545 EPIPYEFMA True PC9_epitope_Rep2 1095.49468367771 1095.4935899358602 88.341 2 -0.41316182866698753 0.11341513572799561 0.8836592307157948 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 108800 17493 SYTSGLETL True PC9_epitope_Rep4 969.4654917244101 969.46494496793 75.288 1 -0.4132807048827543 0.113464603362295 0.8837816029703913 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 125877 20139 VLAPSLVVA True PC9_epitope_Rep2 867.5429541994699 867.5424049679301 82.876 1 -0.4133066763349959 0.11349109789742447 0.8838083345898129 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3', 'ENST00000497918.5_1_2:220033318-220033813:-|nuORF', 'nc|ENSG00000213901|Q6PIS1-2|SLC23A3'] 93206 4353 RPPPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 23.185 2 -0.4133203062880329 0.11349109789742447 0.8838223629610509 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 19778 9428 ELSEQLGQA True H1975_Epitope_Rep3 973.47163973401 973.47054993586 41.266 2 -0.4133252502569626 0.11349109789742447 0.883827451358759 ['ENSG00000261150|ENST00000615648|EPPK1'] 94296 14242 RRRHRGRHL True NCI_RA007_Epitope_Rep1 1242.7394712162998 1242.73783490379 59.435 3 -0.4133358561285375 0.11349109789742447 0.8838383669015327 ['ENST00000543476.5_1_12:21590648-21593357:+|nuORF'] 109453 7353 TDKVDNNTL True PC9_epitope_Rep6 1018.49310345458 1018.49200993586 37.46 2 -0.41342983054927784 0.11352342438054766 0.8839350756844849 ['nc|ENSG00000198788|Q02817|MUC2'] 68355 10969 LTEMWYWI True H1975_Epitope_Rep2 1140.5314035396 1140.53030993586 47.221 2 -0.41346469437860245 0.11353472353112523 0.8839709495894966 ['ENSG00000205269|ENST00000379426|TMEM170B'] 18737 10444 ELASWVRRPG True H1975_Epitope_Rep1 1169.63054041725 1169.62944993586 45.127 2 -0.41349191880969816 0.11353472353112523 0.8839989611270014 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant', 'ENSG00000250799|ENST00000653904|PRODH2'] 32009 6500 GEQGMSSWE True H1975_Epitope_Rep2 1009.38111047745 1009.38000993586 29.918 2 -0.413499577868035 0.11353472353112523 0.8840068413627855 ['ENSG00000126882|ENST00000372271|FAM78A'] 35660 4972 GTDTTGQEVA True NCI_RA007_Epitope_Rep5 977.4301688448498 977.42906993586 25.827 2 -0.413577097114159 0.11358223532032281 0.8840865927820564 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-2|METTL22'] 126653 6260 VLNSC[Carbamidomethyl]RNEKE True NCI_RA007_Epitope_Rep1 1247.59283485862 1247.59172993586 28.381 2 -0.4135941421586522 0.11358223532032281 0.8841041270715382 ['SOX6|p.G533V|1|0.16|ENSG00000110693|chr11:16046539-16046539|C/A|missense_variant'] 67428 5943 LSSPLYLSAP True NCI_RA007_Epitope_Rep1 1046.56481184286 1046.56370993586 27.163 2 -0.4136820970301816 0.1136126102972672 0.8841945975151185 ['ENST00000361577.7_2_14:45431416-45431725:+|nuORF'] 72152 17008 MFVFKERWFWR True PC9_epitope_Rep6 1630.8231092975398 1630.82200993586 77.972 2 -0.4137039787481356 0.1136126102972672 0.8842171027202678 ['ENSG00000157227|ENST00000311852|MMP14'] 135590 23955 WLCRRKWK True PC9_epitope_Rep4 1174.6545874204596 1174.65348993586 100.61 2 -0.41378707833176936 0.1136390892425774 0.8843025615744283 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1', 'RASGRF1|p.R214Q|1|0.16|ENSG00000058335|chr15:79046983-79046983|C/T|missense_variant', 'ENST00000502677.1_1_5:80366283-80383248:+|nuORF', 'ENSG00000113319|ENST00000265080|RASGRF2'] 66853 11589 LSNDHICYFLY True H1975_Epitope_Rep2 1386.6278231055799 1386.62672993586 49.641 2 -0.41380064028410063 0.1136390892425774 0.8843165072794713 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3'] 55795 16550 LANLVGLAE True PC9_epitope_Rep5 898.5123823471799 898.51128993586 68.664 2 -0.4138013300660564 0.1136390892425774 0.8843172165700554 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89'] 113858 2636 TNKKEVDENK True NCI_RA007_Epitope_Rep4 1203.6095301891498 1203.60787490379 14.761 3 -0.41383122473596246 0.1136390892425774 0.8843479558342502 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant', 'FSIP2|p.V5525L|1|0.24|ENSG00000188738|chr2:185805879-185805879|G/T|missense_variant'] 110204 4357 TEQIRREIAA True H1975_Epitope_Rep2 1185.6465844042102 1185.64492490379 21.874 3 -0.4138958591946469 0.11368853863285934 0.8844144103741104 ['ENSG00000019995|ENST00000359653|ZRANB1'] 23306 11339 EVQKTEESKVP True NCI_RA007_Epitope_Rep1 1272.6561460284 1272.65504993586 48.078 2 -0.4139379456112318 0.11369398382897081 0.8844576775163275 ['ENSG00000273136|ENST00000620612|NBPF26'] 71624 9363 MDPFNHRIF True NCI_RA007_Epitope_Rep5 1175.5545985956699 1175.5535099358601 42.657 2 -0.41396376287201087 0.11369398382897081 0.8844842173509966 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 112953 15476 TLLLQHTDP True PC9_epitope_Rep2 1036.5553097883198 1036.5542099358602 64.805 2 -0.413993389621777 0.11369398382897081 0.8845146716778781 ['ENST00000579053.5_1_18:691132-706776:-|nuORF'] 103829 10381 SPYHYRLDW True H1975_Epitope_Rep1 1235.5723568347898 1235.5712499358601 44.879 2 -0.413994325501353 0.11369398382897081 0.8845156336716244 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 130406 16423 VSLQKEAGV True PC9_epitope_Rep3 929.5181960036099 929.51708993586 68.306 2 -0.4139946759505724 0.11369398382897081 0.884515993899105 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16'] 87604 20301 QQPILPIAY True PC9_epitope_Rep4 1041.5858816406098 1041.58478993586 86.23 2 -0.41402833608713047 0.11369398382897081 0.8845505920953104 ['ENSG00000169330|ENST00000305428|MINAR1'] 87800 16901 QRDSLLWKL True PC9_epitope_Rep2 1157.6556925359298 1157.65405490379 70.254 3 -0.4140340757602052 0.11370721847271233 0.8845564915019046 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 109077 2757 TALHSLEQTSP True H1975_Epitope_Rep2 1182.5880664685799 1182.58642490379 14.633 3 -0.41403932990920866 0.11370721847271233 0.884561891815462 ['nc|ENSG00000135100|P20823-6|HNF1A', 'nc|ENSG00000135100|P20823-3|HNF1A', 'nc|ENSG00000135100|P20823-2|HNF1A', 'nc|ENSG00000135100|P20823|HNF1A', 'ENSG00000135100|ENST00000257555|HNF1A', 'nc|ENSG00000135100|P20823-7|HNF1A'] 33292 9317 GKLVINGNL True PC9_epitope_Rep2 926.5549158655 926.55380993586 41.176 2 -0.4140579624690208 0.11371460870458866 0.8845810422732288 ['ENST00000447061.2_1_2:38512560-38513046:+|nuORF'] 64480 20405 LPQEYFLF True NCI_RA007_Epitope_Rep4 1055.5327834385898 1055.5316899358602 88.351 2 -0.41409060851885054 0.11371460870458866 0.884614594078228 ['ENSG00000185272|ENST00000400577|RBM11'] 101949 18837 SLQDSHFLT True PC9_epitope_Rep1 1046.50327421546 1046.5021699358601 77.241 2 -0.41409499010042683 0.11371460870458866 0.8846190970653053 ['BMP7|p.R214Vfs*51|1|0.22|ENSG00000101144|chr20:57202595-57202595|G/-|frameshift_variant', 'ENSG00000101144|ENST00000395863|BMP7'] 60238 21984 LGQNERNVAI True PC9_epitope_Rep1 1112.59382055536 1112.59272993586 89.383 2 -0.4141062486487965 0.11371460870458866 0.8846306673932176 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 36836 20619 GVLGVVTGV True PC9_epitope_Rep1 799.4803539429099 799.47924993586 84.13 2 -0.41411276743440756 0.11371460870458866 0.8846373665870587 ['ENSG00000124217|ENST00000244051|MOCS3'] 78824 5479 PADLGPRAQSP True H1975_Epitope_Rep3 1107.56727145435 1107.5661699358602 26.129 2 -0.4143041243934775 0.1138286575548933 0.8848339818871815 ['ENSG00000146950|ENST00000380913|SHROOM2'] 28484 8141 FSDVHFDSKVK True H1975_Epitope_Rep3 1307.6510010783102 1307.64990993586 36.291 2 -0.41432657422199426 0.1138286575548933 0.8848570438578487 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 71971 4729 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 23.315 2 -0.4143296918117023 0.1138286575548933 0.8848602463760139 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 57120 10667 LDTDQLLEA True H1975_Epitope_Rep1 1016.5026055091199 1016.50150993586 45.989 2 -0.41435629790755346 0.11384383510027918 0.8848875764807717 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 57484 9431 LEDFKQAA True H1975_Epitope_Rep1 920.46034677432 920.45924993586 41.19 2 -0.41439765225606456 0.11385316230240962 0.8849300533728989 ['ENSG00000139865|ENST00000553443|TTC6', 'nc|ENSG00000139865|Q86TZ1|TTC6', 'nc|ENSG00000139865|Q86TZ1-2|TTC6'] 56408 6061 LDEDFLLP True NCI_RA007_Epitope_Rep1 960.4804135125598 960.47930993586 27.614 2 -0.41440186910709426 0.11385316230240962 0.8849343844969284 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant'] 21749 8656 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep1 1133.4811592523297 1133.48006993586 38.134 2 -0.41441576800310426 0.11385316230240962 0.8849486597900721 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 4968 14968 ALGPRSASLLS True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 69.584 2 -0.4144179493580943 0.11385316230240962 0.8849509001835583 ['ENSG00000213654|ENST00000375040|GPSM3'] 84972 9037 QEEPVVQAS True H1975_Epitope_Rep2 985.47163973401 985.47054993586 39.714 2 -0.4144847650194487 0.11386638809446338 0.8850195196168694 ['PRMT7|p.G330A|1|0.15|ENSG00000132600|chr16:68345736-68345736|G/C|missense_variant'] 67478 4921 LSSSSHGVP True NCI_RA007_Epitope_Rep2 869.42429561877 869.42318993586 23.761 2 -0.4145047305145241 0.11386638809446338 0.8850400223759536 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 32973 8644 GIEIHVNVE True H1975_Epitope_Rep1 1008.52400966004 1008.52290993586 38.178 2 -0.4145242384738551 0.1138796129805634 0.8850600545178224 ['ENSG00000243156|ENST00000441493|MICAL3', 'nc|ENSG00000243156|Q7RTP6-2|MICAL3', 'nc|ENSG00000243156|Q7RTP6-4|MICAL3', 'nc|ENSG00000243156|Q7RTP6-3|MICAL3', 'MICAL3|p.Q1373Rfs*65|1|0.52|ENSG00000243156|chr22:17818544-17818544|G/-|frameshift_variant', 'nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 102176 14848 SLRTALILH True PC9_epitope_Rep5 1022.62366413166 1022.62256993586 62.114 2 -0.4145466653712852 0.1138796129805634 0.8850830830901002 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 141445 20051 YTFTRRFIYF True PC9_epitope_Rep3 1412.72410644892 1412.72245490379 82.375 3 -0.41455707520923935 0.11389478731419961 0.885093771864196 ['ENST00000335670.10_1_15:60784332-60784527:-|nuORF'] 102316 6163 SLSQTALP True PC9_epitope_Rep3 815.4388830537499 815.43778993586 28.75 2 -0.41462574064740504 0.1139041095890411 0.8851642717906526 ['ENST00000252595.11_1_19:17615396-17615555:+|nuORF'] 78627 9830 NYTARFSRF True PC9_epitope_Rep4 1160.57269118796 1160.5710449037902 45.459 3 -0.41462749440378344 0.1139041095890411 0.8851660722773596 ['ENSG00000144231|ENST00000272645|POLR2D'] 125438 15296 VITPVLLHF True NCI_RA007_Epitope_Rep3 1037.62735252977 1037.6262499358602 67.72 2 -0.4146352837370428 0.1139041095890411 0.8851740690895961 ['nc|ENSG00000175606|Q9BUB7-2|TMEM70', 'ENSG00000175606|ENST00000312184|TMEM70'] 2329 4739 AEPMGQQYYPD True H1975_Epitope_Rep2 1297.52850298713 1297.52686490379 23.32 3 -0.4146717797752269 0.1139041095890411 0.8852115356284348 ['nc|ENSG00000184402|O75177-2|SS18L1', 'ENSG00000184402|ENST00000331758|SS18L1', 'nc|ENSG00000184402|O75177-5|SS18L1', 'nc|ENSG00000184402|O75177-4|SS18L1', 'nc|ENSG00000184402|O75177-3|SS18L1'] 82821 15741 PRRWWRWCWQP True NCI_RA007_Epitope_Rep4 1655.8044395416298 1655.80334993586 68.362 2 -0.41485450138341184 0.11397065118747966 0.8853990760004722 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 85544 6370 QGEASIMGQ True H1975_Epitope_Rep2 919.40693130247 919.40582993586 29.429 2 -0.4148592033678118 0.11398387069157406 0.8854039011018431 ['EPHA3|p.L668Q|1|0.05|ENSG00000044524|chr3:89419319-89419319|T/A|missense_variant'] 111515 8312 TIADSATSP True H1975_Epitope_Rep2 861.4079768482901 861.4074249679301 36.923 1 -0.41489544401549905 0.11398387069157406 0.8854410891853436 ['ENSG00000120278|ENST00000696526|PLEKHG1', 'PLEKHG1|p.S567Ffs*10|1|0.2|ENSG00000120278|chr6:150830811-150830815|CCTCC/-|frameshift_variant', 'PLEKHG1|p.D145Tfs*43|1|0.17|ENSG00000120278|chr6:150768657-150768657|G/-|frameshift_variant'] 9520 5920 AVWDENKKRP True NCI_RA007_Epitope_Rep2 1241.65166978465 1241.6500349037901 27.643 3 -0.41503831921118106 0.11406752962125882 0.8855876738156859 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318'] 5522 15665 ALYQTKYEEL True PC9_epitope_Rep4 1256.6288686514 1256.6272349037902 68.183 3 -0.41506226900265125 0.11407879192562535 0.8856122413874837 ['CON__ENSEMBL:ENSBTAP00000038253'] 101447 19744 SLKVRKWRSI True PC9_epitope_Rep5 1271.78262438455 1271.78098490379 80.99 3 -0.4150700096090704 0.11407879192562535 0.8856201814142037 ['ENST00000461003.5_1_1:161022149-161022579:-|nuORF', 'nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30', 'nc|ENSG00000186517|Q7Z6I6-3|ARHGAP30', 'ENSG00000186517|ENST00000368013|ARHGAP30'] 99752 13612 SIILYNNDI True PC9_epitope_Rep3 1063.55497543515 1063.5538699358601 57.422 2 -0.4150764584857949 0.11407879192562535 0.8856267963403327 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 23515 12905 EVVKYTQDLF True NCI_RA007_Epitope_Rep2 1240.6339540318397 1240.6328499358601 54.818 2 -0.4152240704995808 0.11416244350089029 0.8857781862161617 ['ATP8A2|p.A390D|1|0.18|ENSG00000132932|chr13:25553904-25553904|C/A|missense_variant'] 122423 9258 VGDVFRGG True PC9_epitope_Rep1 805.4082516318099 805.40714993586 40.464 2 -0.4152646108612276 0.11417565485362095 0.8858197564339284 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 35589 20842 GTALQSIL True H1975_Epitope_Rep1 801.45961849833 801.4590749679301 86.612 1 -0.4153672015495766 0.11417565485362095 0.885924938410875 ['ENST00000468492.5_3_10:14572436-14614290:-|nuORF'] 24349 9287 EYWDRQRNRHR True NCI_RA007_Epitope_Rep2 1614.7876031771798 1614.78595490379 40.734 3 -0.41544547467670956 0.11422310484147093 0.8860051742721323 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'ENSG00000178252|ENST00000608424|WDR6'] 133500 15231 VWGFRHDRSL True PC9_epitope_Rep5 1271.65233849099 1271.65069490379 63.595 3 -0.41547014841043656 0.11422310484147093 0.8860304641373212 ['ENSG00000269556|ENST00000600449|TMEM185A', 'ENSG00000226479|ENST00000426077|TMEM185B', 'TMEM185A|p.C130S|1|0.22|ENSG00000269556|chrX:149608661-149608661|C/G|missense_variant', 'ENST00000517359.1_1_X:148690238-148690502:-|nuORF', 'ENST00000502900.2_1_X:148688442-148693021:-|nuORF'] 86942 19330 QLVEGLHYL True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 82.46 2 -0.41552052454322774 0.11425343239634335 0.8860820943864951 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant'] 15043 7907 DYNENGSNFSK True NCI_RA007_Epitope_Rep1 1273.52110910757 1273.5200099358601 34.75 2 -0.4155542885234491 0.11425343239634335 0.8861166960406093 ['ENSG00000198105|ENST00000395867|ZNF248'] 18614 5667 EKSLHFAHLK True NCI_RA007_Epitope_Rep5 1208.6665915728001 1208.66494490379 28.486 3 -0.41558401480005797 0.11426859539501841 0.8861471579011565 ['ENST00000559905.5_3_15:49912372-49912896:-|nuORF', 'ENST00000561064.5_2_15:49907413-49912956:-|nuORF'] 86441 5691 QKKLKKKKKKK True NCI_RA007_Epitope_Rep5 1412.0078732921095 1412.0067699358601 28.578 2 -0.41562152774153843 0.11428180153037643 0.8861855965478516 ['ENST00000378026.4_3_12:106631761-106631812:-|nuORF'] 8939 11510 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6971299358602 55.352 2 -0.41565292061054565 0.11428180153037643 0.8862177618993917 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 113422 16697 TLSGVGTLLSL True PC9_epitope_Rep1 1059.61757569171 1059.61646993586 69.053 2 -0.415670616921608 0.11431016775077028 0.8862358927795312 ['ENST00000240922.7_1_3:113440072-113440111:-|nuORF'] 22864 8536 EVDECHMDP True H1975_Epitope_Rep2 1073.3793962252898 1073.37828993586 37.788 2 -0.41568932097638966 0.11431016775077028 0.8862550554582913 ['ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'EML4-ALK|9|fusion', 'EML4-ALK|11|fusion', 'EML4-ALK|8|fusion', 'EML4-ALK|10|fusion'] 47475 20641 IVPEGGILQI True PC9_epitope_Rep4 1037.6120963884498 1037.61098993586 87.552 2 -0.4156940892540799 0.11431016775077028 0.8862599405404609 ['ENSG00000163661|ENST00000295927|PTX3'] 38250 10063 HEDVNVGSI True PC9_epitope_Rep6 968.45632402304 968.45522993586 49.298 2 -0.415781972107075 0.11434244535355437 0.8863499678997799 ['ENSG00000133302|ENST00000265140|SLF1'] 5187 15300 ALMLWRLHWRR True NCI_RA007_Epitope_Rep2 1536.86122614176 1536.8601299358602 64.207 2 -0.41593342554317436 0.1143859649122807 0.8865050801525401 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000465966.4_1_6:30861134-30864801:+|nuORF'] 18417 10173 EIWEKFDP True PC9_epitope_Rep1 1062.5022115862998 1062.50110993586 44.007 2 -0.41594029754800416 0.1143859649122807 0.8865121170616207 ['SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A'] 69293 10105 LTTRRLGT True NCI_RA007_Epitope_Rep5 916.5454138109599 916.54430993586 45.504 2 -0.4159512944848739 0.1143859649122807 0.8865233776861708 ['ENSG00000185002|ENST00000332958|RFX6', 'RFX6|p.W295Cfs*49|1|0.24|ENSG00000185002|chr6:116916226-116916226|G/-|frameshift_variant', 'RFX6|p.W356Cfs*14|1|0.09|ENSG00000185002|chr6:116919181-116919182|GG/-|frameshift_variant', 'RFX6|p.E632Sfs*9|1|0.26|ENSG00000185002|chr6:116927034-116927034|G/-|frameshift_variant', 'nc|ENSG00000111783|Q33E94-4|RFX4', 'ENST00000536688.5_1_12:106995054-107126892:+|nuORF', 'ENSG00000111783|ENST00000392842|RFX4', 'nc|ENSG00000111783|Q33E94-2|RFX4'] 130381 13863 VSLAWWFL True PC9_epitope_Rep2 1020.5432885526399 1020.54218993586 58.607 2 -0.4159564741817887 0.1143859649122807 0.8865286814977793 ['ENST00000476877.1_1_20:55746017-55748543:-|nuORF'] 25457 13476 FEELC[Carbamidomethyl]SDLFR True H1975_Epitope_Rep1 1314.5914378762898 1314.59034993586 56.952 2 -0.4159878475494056 0.11443339551919489 0.886560805455552 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 130672 9544 VSTLGLGPRVV True NCI_RA007_Epitope_Rep2 1096.6604435631998 1096.65934993586 41.738 2 -0.41599824177075806 0.11443339551919489 0.8865714479093193 ['ENST00000216181.9_1_22:36677793-36678213:-|nuORF'] 45820 17915 ISDGANIINL True PC9_epitope_Rep1 1028.55022440788 1028.54912993586 73.703 2 -0.41609917464677776 0.11446370809016071 0.8866747797549047 ['nc|ENSG00000244694|Q6ZW05|PTCHD4', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 79954 5034 PESTTPVKA True H1975_Epitope_Rep3 928.48656152216 928.48546993586 24.484 2 -0.4161398272541867 0.11446370809016071 0.8867163927041485 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 33203 6983 GKAAPAEAL True PC9_epitope_Rep1 826.45486747106 826.45376993586 31.665 2 -0.41619559731547845 0.11449597809344515 0.8867734747224312 ['ENSG00000116198|ENST00000378230|CEP104'] 123304 7738 VGLPDAIDIQ True PC9_epitope_Rep4 1039.55497543515 1039.5538699358601 37.155 2 -0.4162559771159065 0.11454144062430476 0.8868352677344157 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant', 'KMT2C|p.L732Ffs*5|1|0.12|ENSG00000055609|chr7:152248240-152248240|G/-|frameshift_variant', 'KMT2C|p.G903*|1|0.04|ENSG00000055609|chr7:152235879-152235880|-/TA|frameshift_variant', 'KMT2C|p.N1398Hfs*15|1|0.2|ENSG00000055609|chr7:152199359-152199360|TT/-|frameshift_variant'] 99535 17367 SIDVFEDYI True PC9_epitope_Rep5 1099.5073565363898 1099.50624993586 71.802 2 -0.41626610817463183 0.11454144062430476 0.8868456351818259 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 3783 9888 AGTLIAKV True PC9_epitope_Rep5 771.48543932335 771.48434993586 43.005 2 -0.4162688669166545 0.11454144062430476 0.8868484582572888 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 10500 6092 CKEFLNRFYK True NCI_RA007_Epitope_Rep1 1346.6805273847801 1346.67889490379 27.733 3 -0.4163043068499278 0.11455659376390458 0.8868847232553984 ['ENSG00000185267|ENST00000465530|CDNF'] 33537 8320 GLEAQVKPEP True H1975_Epitope_Rep1 1066.56587447202 1066.56476993586 36.934 2 -0.4163625864734624 0.11456978574851119 0.8869443540600772 ['ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-2|TCAF2', 'ENST00000494978.5_1_7:143510715-143533742:-|nuORF'] 58874 8669 LETAAPAPRPY True PC9_epitope_Rep2 1184.61897267404 1184.6178699358602 38.71 2 -0.41640640197633627 0.11456978574851119 0.8869891808064462 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 89890 15504 RCCSCSCK True PC9_epitope_Rep6 888.30743466868 888.30632993586 71.815 2 -0.4164258823757514 0.11458493762513476 0.8870091095380428 ['ENST00000229812.7_1_6:36462563-36462647:-|nuORF'] 111192 18423 THIILDNADVL True PC9_epitope_Rep4 1222.65575210558 1222.65464993586 78.932 2 -0.4164850653808864 0.11461720113624696 0.8870696498242784 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 94532 17882 RRRRVPGRE True NCI_RA007_Epitope_Rep5 1180.7013543720798 1180.70024993586 75.577 2 -0.41652243028861846 0.11463235168295145 0.8871078679328754 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 3400 9475 AGIEAQQVV True PC9_epitope_Rep1 913.48689587533 913.48578993586 41.303 2 -0.4165992307743246 0.11466265122088945 0.8871864130728263 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 140622 27710 YRRQLRWKMLQ True PC9_epitope_Rep3 1576.8772701287196 1576.8761699358602 114.59 2 -0.41667217726991146 0.11466265122088945 0.8872610054127462 ['nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1', 'ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1'] 114943 15228 TQTKDWFAL True PC9_epitope_Rep4 1108.5553097883198 1108.5542099358602 66.504 2 -0.4167225954776139 0.11474428075218589 0.8873125547560349 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'ENST00000520923.5_1_8:101051146-101092499:-|nuORF'] 15186 8279 EAAVVAAAV True H1975_Epitope_Rep1 799.4439684341899 799.44286993586 36.779 2 -0.41672594597223256 0.11474428075218589 0.8873159802332101 ['ENSG00000154174|ENST00000284320|TOMM70'] 66900 13054 LSNLQRTKRQP True NCI_RA007_Epitope_Rep2 1339.76843087239 1339.76732993586 55.406 2 -0.41674548728743277 0.11475746428265891 0.8873359584122079 ['ENST00000541377.5_1_2:122363504-122363705:-|nuORF'] 102173 14940 SLRTALILH True PC9_epitope_Rep1 1022.62366413166 1022.62256993586 62.289 2 -0.416773023456073 0.11475746428265891 0.8873641088376414 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 72598 21020 MLSIWILLF True PC9_epitope_Rep5 1134.6511247494598 1134.6500299358602 85.912 2 -0.4168197548979425 0.11476475620188195 0.8874118791434633 ['ENSG00000176988|ENST00000370467|FMR1NB'] 142761 22498 YYQSNEFI True PC9_epitope_Rep1 1062.46582607758 1062.46472993586 91.338 2 -0.4168435844088483 0.11476475620188195 0.8874362366579884 ['nc|ENSG00000106278|P23471-3|PTPRZ1', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1'] 27184 10479 FLLNRESVPAR True PC9_epitope_Rep5 1300.72516907808 1300.7235149037901 45.294 3 -0.41687381454722827 0.11476475620188195 0.8874671349315562 ['GABRA2|p.W273L|1|0.29|ENSG00000151834|chr4:46303498-46303498|C/A|missense_variant'] 66207 18269 LSESRVLVL True PC9_epitope_Rep1 1014.6073453611799 1014.60624993586 75.062 2 -0.4168915831994457 0.11476475620188195 0.8874852954172309 ['ENSG00000168806|ENST00000305641|LCMT2', 'ENST00000567039.1_1_15:43620629-43622752:-|nuORF'] 75641 7006 NLEKTNLGDRR True H1975_Epitope_Rep1 1314.70041088222 1314.6993099358601 31.983 2 -0.41689497747843723 0.11476475620188195 0.8874887644723403 ['ENST00000356721.3_1_16:48399534-48399783:-|nuORF'] 11557 12578 DFTIQENGL True H1975_Epitope_Rep2 1035.48728979815 1035.48618993586 53.476 2 -0.416995308567357 0.1147799011137534 0.8875912950805681 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-2|ADGRV1'] 11570 15545 DFWLRHRLQWW True PC9_epitope_Rep5 1641.8316998352898 1641.8306099358601 64.805 2 -0.4170770261107181 0.11481215356189695 0.8876747886632713 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000580893.5_1_17:62486773-62489133:-|nuORF', 'ENST00000585141.5_1_17:62481823-62493086:-|nuORF'] 101381 10053 SLKEKEHNKEP True PC9_epitope_Rep3 1337.6939285194499 1337.6922749037901 43.625 3 -0.41713314175098043 0.11483851101683318 0.8877321158864808 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519205.1_1_5:65473318-65474693:+|nuORF', 'ENST00000522214.1_1_5:65470720-65474693:+|nuORF'] 101749 10749 SLNLGYGMLAC True H1975_Epitope_Rep1 1140.5307519166 1140.52964993586 46.308 2 -0.4171813768224031 0.11483851101683318 0.8877813871640661 ['ENST00000472054.2_1_6:142738255-142764649:+|nuORF'] 69138 13648 LTRPPYCL True PC9_epitope_Rep1 961.5055231449298 961.50442993586 57.353 2 -0.41722797105867354 0.11483851101683318 0.8878289777639653 ['ENSG00000104164|ENST00000220531|BLOC1S6', 'ENST00000564080.1_1_15:45879608-45951106:+|nuORF', 'ENST00000567740.5_1_15:45879608-45897630:+|nuORF', 'ENST00000562384.5_1_15:45879608-45890085:+|nuORF', 'ENST00000567461.5_1_15:45879608-45895317:+|nuORF', 'nc|ENSG00000104164|Q9UL45-2|BLOC1S6'] 139178 7541 YLEERKPYSSR True NCI_RA007_Epitope_Rep5 1426.7204776204599 1426.71883490379 35.692 3 -0.4172817425087198 0.11483851101683318 0.8878838934395269 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A', 'ENST00000548908.2_1_12:80182403-80182520:-|nuORF', 'ENST00000550903.5_1_12:80169711-80183436:-|nuORF'] 53765 5301 KSTVLSSVP True H1975_Epitope_Rep2 916.5229470308799 916.52184993586 25.446 2 -0.41732940086542614 0.11485365311254427 0.887932560906078 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant'] 57405 7986 LEAREYRLDK True NCI_RA007_Epitope_Rep2 1291.68844921619 1291.68734993586 35.694 2 -0.41736344100435147 0.1148668297439231 0.8879673189078766 ['LILRB4|p.V333*|1|0.23|ENSG00000186818|chr19:54666703-54666703|C/-|frameshift_variant', 'nc|ENSG00000186818|Q8NHJ6-2|LILRB4', 'nc|ENSG00000186818|Q8NHJ6|LILRB4', 'ENSG00000186818|ENST00000695418|LILRB4', 'nc|ENSG00000186818|Q8NHJ6-3|LILRB4'] 5148 14492 ALLQETAY True PC9_epitope_Rep1 907.46509780159 907.46454496793 60.568 1 -0.4173877399275452 0.1148668297439231 0.8879921287866627 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 119527 16752 VASGTVVGV True PC9_epitope_Rep1 787.4439684341899 787.44341496793 69.264 1 -0.41740834820723954 0.11488000547373463 0.8880131694504552 ['ENSG00000054793|ENST00000338821|ATP9A', 'ATP9A|p.R519Efs*8|1|0.23|ENSG00000054793|chr20:51639456-51639456|G/-|frameshift_variant'] 30735 10414 GALKLAEV True PC9_epitope_Rep5 799.4803539429099 799.47924993586 45.042 2 -0.41745996742232033 0.11488000547373463 0.8880658678034373 ['nc|ENSG00000160838|Q8N4P6-2|LRRC71', 'ENSG00000160838|ENST00000337428|LRRC71'] 127964 10052 VPHLLTEA True PC9_epitope_Rep2 878.48616759934 878.48506993586 43.992 2 -0.41750064837170325 0.11489514556464028 0.8881073952990551 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 88686 4936 QTEVPKRGGRK True NCI_RA007_Epitope_Rep2 1254.7156670235397 1254.71401490379 23.821 3 -0.41756819551806496 0.11490438887558581 0.8881763404249469 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant', 'MKI67|p.W954Cfs*12|1|0.03|ENSG00000148773|chr10:128108978-128108979|-/AA|frameshift_variant'] 78875 19688 PAFYPYGQY True NCI_RA007_Epitope_Rep5 1104.4916469026 1104.4905499358601 82.642 2 -0.4175835721436152 0.11490438887558581 0.8881920339578648 ['ENSG00000177508|ENST00000329734|IRX3', 'ENST00000558180.2_1_16:54318400-54319510:-|nuORF', 'IRX3|p.L245Pfs*3|1|0.36|ENSG00000177508|chr16:54285149-54285150|-/C|frameshift_variant'] 82597 14459 PQDRHFVRKD True NCI_RA007_Epitope_Rep2 1296.6687168311198 1296.6676099358601 60.905 2 -0.4175949031515099 0.11490438887558581 0.8882035981777935 ['ENSG00000145996|ENST00000274695|CDKAL1', 'nc|ENSG00000145996|Q5VV42-3|CDKAL1'] 23576 11197 EVYEYWIKK True NCI_RA007_Epitope_Rep1 1256.6441247927198 1256.64302993586 47.554 2 -0.4176365685272644 0.11490438887558581 0.8882461187904496 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32581422-32635732:-|nuORF'] 115401 17848 TRLEQFTFQ True PC9_epitope_Rep6 1168.58767254576 1168.58656993586 81.282 2 -0.4177094850300962 0.11495373458532164 0.8883205232563816 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 98649 22387 SGALYIPGWI True PC9_epitope_Rep3 1075.57023157647 1075.56912993586 91.389 2 -0.4177240901310769 0.1149688718615311 0.8883354250561531 ['ENSG00000016490|ENST00000394711|CLCA1'] 86246 16044 QINEKITV True PC9_epitope_Rep6 943.5338460677499 943.53274993586 74.038 2 -0.41776123425316086 0.11498400861995245 0.888373321737057 ['ENSG00000174373|ENST00000680220|RALGAPA1'] 132567 17476 VVEMPQFQL True PC9_epitope_Rep4 1089.5528672601697 1089.5517699358602 75.221 2 -0.41782014240084525 0.11499914486061227 0.88843341746131 ['SNCAIP|p.Y105Mfs*11|1|0.12|ENSG00000064692|chr5:122423049-122423050|-/ATGCCACAATTCCAGC|frameshift_variant'] 9083 18490 AVIGDVIRV True PC9_epitope_Rep1 940.57056592964 940.56946993586 75.912 2 -0.41785904923220163 0.11500444626855462 0.8884731046539665 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 91123 12269 RFVEKYTEL True PC9_epitope_Rep2 1183.62372370131 1183.62262993586 52.502 2 -0.4178662543030426 0.11500444626855462 0.8884804538894633 ['ENSG00000181610|ENST00000313608|MRPS23'] 131179 17099 VTELGIYLHV True PC9_epitope_Rep1 1142.6335601090202 1142.6324699358602 70.597 2 -0.4178808243745992 0.11500444626855462 0.8884953151572107 ['ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 82908 6173 PSALKDVL True PC9_epitope_Rep1 841.49091862661 841.48982993586 28.559 2 -0.41790540444143165 0.11500444626855462 0.8885203854684999 ['ENSG00000124120|ENST00000262605|TTPAL'] 129143 18356 VQRASFFAA True PC9_epitope_Rep1 995.5188647099498 995.51776993586 75.396 2 -0.4179084277086739 0.11500444626855462 0.8885234689465348 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENST00000556959.1_1_14:72196918-72202208:+|nuORF'] 121124 8238 VERQHTQI True PC9_epitope_Rep3 1009.53049202281 1009.52938993586 36.665 2 -0.41793695472189474 0.11500444626855462 0.8885525631524354 ['MIB1|p.Q879Hfs*19|1|0.14|ENSG00000101752|chr18:21853189-21853190|-/CATCTTTATAT|frameshift_variant', 'ENSG00000101752|ENST00000261537|MIB1'] 87412 22229 QPYGGFLDI True PC9_epitope_Rep1 1008.4916469025999 1008.4910749679301 90.326 1 -0.4179678238580881 0.11501367989056087 0.8885840441218645 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 112448 21491 TLDEEDLVDSL True PC9_epitope_Rep1 1247.5768926481899 1247.57578993586 87.509 2 -0.41800829700392833 0.11501367989056087 0.888625316418347 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 58255 8729 LELPIQNEPP True NCI_RA007_Epitope_Rep5 1148.607739284 1148.60664993586 40.242 2 -0.4180302003602095 0.11501367989056087 0.8886476508236353 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant'] 94058 27056 RRKWRRWHLQG True H1975_Epitope_Rep2 1577.8916147532498 1577.88997490379 111.68 3 -0.41807400260092625 0.11501367989056087 0.8886923120451178 ['ENST00000498102.1_1_3:42576287-42577770:+|nuORF', 'nc|ENSG00000114812|P32241-3|VIPR1', 'nc|ENSG00000114812|P32241-4|VIPR1', 'nc|ENSG00000114812|P32241-5|VIPR1', 'ENSG00000114812|ENST00000325123|VIPR1', 'nc|ENSG00000114812|P32241-2|VIPR1'] 47671 23861 IWRKKYMRWMN True H1975_Epitope_Rep2 1610.8326284354198 1610.8309949037903 98.292 3 -0.41811657763387905 0.11506301191840085 0.888735718120051 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 18702 7382 ELALCMLP True NCI_RA007_Epitope_Rep1 888.44489703432 888.44378993586 32.708 2 -0.41814641920688744 0.11507814370233577 0.888766139907683 ['ENSG00000171017|ENST00000306708|LRRC8E'] 43736 15426 IHFFRHREQEE True PC9_epitope_Rep3 1526.7378590201004 1526.73565987172 64.491 4 -0.41827469622269725 0.11513079158830569 0.8888968896426598 ['MRE11A|p.K405E|1|0.33|ENSG00000020922|chr11:94464125-94464125|T/C|missense_variant'] 71972 4826 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 23.689 2 -0.4182900734570045 0.11513079158830569 0.8889125609629773 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 56784 14390 LDMCSSHP True PC9_epitope_Rep3 888.3469738982001 888.34586993586 60.442 2 -0.41829268653869117 0.11513079158830569 0.8889152239695839 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 105136 12100 SRFHEQFIV True PC9_epitope_Rep4 1161.59309227937 1161.59143490379 54.347 3 -0.4182959909992983 0.11513079158830569 0.8889185915437757 ['nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1'] 101700 14577 SLMKSYVS True PC9_epitope_Rep1 913.45790424617 913.45680993586 60.894 2 -0.41829987971562643 0.11513079158830569 0.8889225545031364 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 119090 16576 VAGPSFETV True PC9_epitope_Rep5 905.44944773745 905.4488949679301 68.765 1 -0.4183075238269085 0.11513079158830569 0.8889303444619824 ['ENSG00000198805|ENST00000361505|PNP', 'ENST00000556754.1_1_14:20943209-20944757:+|nuORF', 'ENST00000554056.5_1_14:20942916-20944757:+|nuORF'] 83349 17622 PTETLLNTV True PC9_epitope_Rep2 986.5284263341399 986.5273299358599 73.062 2 -0.4183301903221985 0.11513079158830569 0.8889534427018502 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 107609 15679 SVPNKDVFQEL True PC9_epitope_Rep6 1274.65066672514 1274.6495699358602 72.519 2 -0.4183447063298134 0.11513079158830569 0.8889682346355434 ['ENSG00000115919|ENST00000264170|KYNU'] 83702 19924 PVFRLLSVL True PC9_epitope_Rep1 1042.65390163078 1042.6528099358602 81.456 2 -0.41850297292740796 0.11524849976919527 0.8891294806986847 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3'] 76317 19337 NPSDLSQIAI True PC9_epitope_Rep2 1056.54513902744 1056.5440499358601 79.753 2 -0.41851153278772 0.1152636257949805 0.8891382001915941 ['ENST00000553891.5_1_14:73491454-73491541:-|nuORF'] 120503 10681 VEFDGIWI True PC9_epitope_Rep3 977.4858332461699 977.48472993586 46.029 2 -0.41856176392172584 0.11527678052449825 0.8891893649545372 ['ENSG00000257335|ENST00000475668|MGAM', 'nc|ENSG00000257335|O43451-1|MGAM'] 11257 7862 DEFLWREQFYR True NCI_RA007_Epitope_Rep3 1587.7470267214699 1587.7453949037902 38.044 3 -0.41861520304591476 0.11527678052449825 0.8892437914583413 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 3161 8609 AGDRSLADVII True PC9_epitope_Rep4 1128.6138872935999 1128.61225490379 40.596 3 -0.41864661387956925 0.11530900076929652 0.8892757798328719 ['ENST00000471105.5_1_1:201965436-201974841:+|nuORF', 'ENSG00000176393|ENST00000295640|RNPEP'] 27078 12230 FLGFFMVP True PC9_epitope_Rep3 956.4829967951999 956.48188993586 52.072 2 -0.41873883208658524 0.1153221532728174 0.889369681517935 ['ENSG00000174231|ENST00000304992|PRPF8'] 13374 8780 DLWYLETEKP True PC9_epitope_Rep3 1292.6288686514 1292.6277699358602 38.725 2 -0.4187599238455514 0.1153221532728174 0.8893911557749168 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 102286 11904 SLSLSPALSV True PC9_epitope_Rep2 972.54916177872 972.54806993586 51.113 2 -0.4188109050932331 0.11533136185706228 0.8894430576568816 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557314.5_1_14:20839728-20850189:-|nuORF'] 48845 2748 KDYRKAEGERE True H1975_Epitope_Rep3 1379.6793410844696 1379.67769490379 14.653 3 -0.41881898620104413 0.11533136185706228 0.8894512841878521 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 95065 7393 RTTFVVGG True NCI_RA007_Epitope_Rep4 835.4552018242298 835.4546549679301 35.079 1 -0.41882618906593566 0.11533136185706228 0.889458616554354 ['ENST00000397722.5_1_16:450423-450627:+|nuORF'] 130905 4298 VTDEAGHPVP True NCI_RA007_Epitope_Rep5 1020.4876241513199 1020.48652993586 23.12 2 -0.4188355836588655 0.11533136185706228 0.8894681798883871 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 133621 13774 VYADQPHIF True PC9_epitope_Rep6 1088.52909504048 1088.5279899358602 64.783 2 -0.41885939890753715 0.11534648388089296 0.8894924220528928 ['ENSG00000100439|ENST00000428304|ABHD4'] 96965 10573 SAYDGKDYIA True PC9_epitope_Rep3 1101.49785448185 1101.4967499358602 45.615 2 -0.4188949602592711 0.11535963352933133 0.8895286186340792 ['ENSG00000204525|ENST00000376228|HLA-C', 'HLA-C|p.T264Pfs*33|1|0.18|ENSG00000204525|chr6:31270315-31270315|T/-|frameshift_variant', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 113494 8643 TLTDNCCVLR True PC9_epitope_Rep3 1136.5318145457597 1136.53015490379 38.196 3 -0.4188951381080324 0.11535963352933133 0.8895287996529666 ['ENST00000412364.2_1_3:197024230-197024314:-|nuORF'] 90022 22144 RDRKKRRRWRR True PC9_epitope_Rep1 1668.0145238505897 1668.0134299358601 89.991 2 -0.41893640810741406 0.11538790230228861 0.889570803460579 ['ENST00000556594.1_1_14:91518767-91526894:-|nuORF'] 34477 9702 GPLFFWKDST True PC9_epitope_Rep4 1196.5866099165996 1196.58496490379 44.954 3 -0.41895370552100053 0.11538790230228861 0.8895884073538108 ['ENST00000237264.8_2_6:134309061-134309127:+|nuORF'] 15462 10642 EALNIQEGKT True H1975_Epitope_Rep1 1101.56660274801 1101.56550993586 45.891 2 -0.41897199556893844 0.11538790230228861 0.8896070207749976 ['nc|ENSG00000211780|A0A075B6T7|TRAV6'] 59538 16842 LFSLYWSV True PC9_epitope_Rep2 1013.52221875489 1013.52112993586 70.031 2 -0.4190412936448948 0.11539907708084088 0.8896775375846195 ['ZZEF1|p.F964Y|1|0.14|ENSG00000074755|chr17:4077981-4077981|A/T|missense_variant'] 19391 9794 ELLTKTLPD True H1975_Epitope_Rep1 1028.57537652656 1028.57426993586 42.6 2 -0.4190922612633516 0.11539907708084088 0.8897293950177532 ['ENSG00000139372|ENST00000392872|TDG', 'ENST00000544060.1_1_12:104359692-104373925:+|nuORF', 'ENST00000542926.5_1_12:104373661-104376713:+|nuORF', 'ENST00000545698.1_1_12:104359681-104373925:+|nuORF'] 17503 4967 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 26.682 3 -0.41909512525810894 0.11539907708084088 0.8897323088486683 ['ENSG00000162378|ENST00000294353|ZYG11B'] 23383 4158 EVRWTDWIEK True NCI_RA007_Epitope_Rep4 1360.6775501793197 1360.67590490379 22.286 3 -0.4191139384495821 0.11541222313371616 0.8897514489712662 ['ENST00000349225.2_1_X:73815703-73815769:-|nuORF'] 81359 22266 PLCSVYSPL True PC9_epitope_Rep2 977.4892043744501 977.48810993586 91.125 2 -0.4191290043972349 0.11541222313371616 0.889766776185791 ['L1MC1_dup5480|chr6:117346585-117346993:-|1.956765618246532|0.1028755834644454|4.25|529.0|15|1|anti-sense'] 125224 14591 VIIQRFWRNYL True NCI_RA007_Epitope_Rep4 1506.8459529170998 1506.84484993586 63.507 2 -0.41922742407235547 0.1154253682879311 0.8898668906651758 ['nc|ENSG00000066933|B2RTY4-2|MYO9A', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF', 'MYO9A|p.E1131Kfs*31|1|0.23|ENSG00000066933|chr15:71899766-71899766|C/-|frameshift_variant', 'MYO9A|p.V1543Dfs*13|1|0.1|ENSG00000066933|chr15:71897875-71897876|-/AT|frameshift_variant'] 81334 16110 PLAPSWDVDMP True PC9_epitope_Rep3 1226.5641602198598 1226.56306993586 67.117 2 -0.41930042064539413 0.1154253682879311 0.8899411308580303 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant', 'ENST00000583079.1_1_17:18023566-18025792:+|nuORF'] 27290 6606 FLQVTATDA True NCI_RA007_Epitope_Rep5 964.48656152216 964.48546993586 32.068 2 -0.4193214934548187 0.11543851254357783 0.8899625605544699 ['ENSG00000166341|ENST00000299441|DCHS1'] 119559 14337 VATAVEQI True PC9_epitope_Rep5 829.4545331178899 829.45342993586 60.148 2 -0.419408220781586 0.11543851254357783 0.8900507466612869 ['ENSG00000028839|ENST00000237264|TBPL1'] 126203 15058 VLGCNNFRVI True PC9_epitope_Rep1 1133.60154878809 1133.59990490379 62.738 3 -0.419502386765141 0.1154536288599894 0.8901464782620216 ['nc|ENSG00000116984|Q99707-2|MTR', 'ENSG00000116984|ENST00000366577|MTR'] 95124 7103 RVFDLELHPA True PC9_epitope_Rep6 1195.6349570913499 1195.63330490379 36.362 3 -0.41960812479176646 0.11546677147593089 0.8902539515858439 ['ENSG00000106333|ENST00000223061|PCOLCE', 'ENST00000496269.1_1_7:100200079-100202130:+|nuORF', 'ENST00000482863.1_1_7:100201527-100201809:+|nuORF'] 94142 5527 RRMQEMLQRMK True NCI_RA007_Epitope_Rep4 1505.7741275831297 1505.77193987172 27.855 4 -0.4196096625620352 0.11546677147593089 0.8902555144154308 ['ENSG00000184702|ENST00000455784|SEPTIN5', 'ENST00000470814.1_1_22:19709577-19710004:+|nuORF'] 57283 13565 LDYVSQDAP True H1975_Epitope_Rep2 1006.4607406971398 1006.4596499358599 57.315 2 -0.41962219340985746 0.11548188653451812 0.8902682492746687 ['ENST00000600534.1_1_19:59084484-59085060:+|nuORF'] 111608 14335 TIDGYFYSL True PC9_epitope_Rep1 1077.50187723313 1077.5007899358602 59.964 2 -0.41968679198069486 0.11551211510201292 0.890333894192532 ['ENSG00000081479|ENST00000649046|LRP2'] 137163 16956 YAWNHQTV True PC9_epitope_Rep5 1017.4668291370899 1017.4657299358599 70.239 2 -0.41971659083128754 0.11551211510201292 0.8903641726848451 ['ENST00000537833.5_1_12:7250950-7252531:-|nuORF'] 90745 3561 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5870849037901 19.715 3 -0.41978743298421806 0.11552722861097346 0.8904361474245426 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 64916 15965 LQEEKLIYV True PC9_epitope_Rep4 1133.63322575585 1133.6321299358601 69.339 2 -0.4198167789953554 0.11553839319276903 0.8904659594321691 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 130539 12040 VSQVTKSSP True PC9_epitope_Rep1 931.49746055903 931.49636993586 51.171 2 -0.41984556033120507 0.11553839319276903 0.8904951959918119 ['ENSG00000170412|ENST00000392627|GPRC5C', 'nc|ENSG00000170412|Q9NQ84-2|GPRC5C'] 103344 12111 SPNGQFVAP True PC9_epitope_Rep2 915.4450310633499 915.4444849679301 51.894 1 -0.41989907239639507 0.11553839319276903 0.8905495496813169 ['ENSG00000121741|ENST00000610343|ZMYM2'] 41167 11114 HVGCTNSSWVL True PC9_epitope_Rep6 1201.55499251849 1201.55335490379 53.687 3 -0.4199262624281118 0.11555153089119738 0.8905771649798003 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant'] 78016 11014 NVQKIILE True PC9_epitope_Rep6 955.5702315764698 955.56912993586 53.263 2 -0.419948568840746 0.11555153089119738 0.8905998190830758 ['nc|nan|Q96LT7-2|C9orf72', 'ENST00000488117.5_1_9:27560206-27567121:-|nuORF', 'ENSG00000147894|ENST00000380003|C9orf72'] 13522 10032 DNQTKKPETY True H1975_Epitope_Rep2 1222.5829810881398 1222.58188993586 43.579 2 -0.41997011143417146 0.11556664217738215 0.8906216964398526 ['ENSG00000158517|ENST00000289473|NCF1', 'nc|ENSG00000165178|A8MVU1|NCF1C', 'nc|ENSG00000290838|A6NI72|NCF1B', 'nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 23705 7713 EYEEHKQSYWR True H1975_Epitope_Rep1 1553.6899057681699 1553.68825490379 34.63 3 -0.42012785608742315 0.1155738545119076 0.8907818617665886 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 126434 20722 VLKNTWGVL True PC9_epitope_Rep4 1028.6018660579198 1028.6007699358602 87.87 2 -0.4201326106330434 0.1155738545119076 0.8907866884360786 ['ENST00000567614.1_1_X:153746486-153746768:-|nuORF'] 117861 10402 TVYQYQYTNWS True NCI_RA007_Epitope_Rep1 1451.6357449369898 1451.6346499358601 44.446 2 -0.42020404413836876 0.1155738545119076 0.8908591996457091 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 14270 16704 DSSSFLGQTY True H1975_Epitope_Rep2 1103.4771190372699 1103.4760299358602 69.489 2 -0.4202118631010593 0.1155738545119076 0.8908671358992744 ['ENST00000584425.1_1_18:71740698-71749311:-|nuORF', 'ENST00000578399.5_1_18:71740698-71797950:-|nuORF', 'nc|ENSG00000141665|Q8NCQ5-2|FBXO15', 'ENSG00000141665|ENST00000419743|FBXO15'] 31270 3423 GDFNYIRRIFP True NCI_RA007_Epitope_Rep2 1396.72516907808 1396.7235149037901 17.971 3 -0.42021398737081816 0.1155738545119076 0.8908692920118998 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4', 'nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 113412 21518 TLSETFPSL True PC9_epitope_Rep2 993.5018772331299 993.50078993586 88.238 2 -0.4202313088889242 0.11558698920322537 0.8908868728144014 ['ENSG00000218819|ENST00000405799|TDRD15'] 71960 4740 MESRPPPPP True H1975_Epitope_Rep1 1006.4906013567798 1006.48950993586 23.289 2 -0.420254204858312 0.11558698920322537 0.8909101105118261 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 94394 19232 RRRRHRHLAV True NCI_RA007_Epitope_Rep3 1355.8235351934302 1355.82242993586 83.957 2 -0.42030495429323433 0.11561720591752365 0.8909616133346535 ['ENST00000589935.1_1_18:54318575-54318788:+|nuORF'] 3389 9407 AGHSDVVL True PC9_epitope_Rep3 796.4079172786401 796.40682993586 41.121 2 -0.4203210081670836 0.11561720591752365 0.8909779043667283 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'MTMR11|p.G424Efs*52|1|0.33|ENSG00000014914|chr1:149931279-149931279|C/-|frameshift_variant', 'MTMR11|p.V303E|1|0.24|ENSG00000014914|chr1:149933483-149933483|A/T|missense_variant', 'nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 43635 10666 IGYGTLPYFYG True H1975_Epitope_Rep1 1249.6019256275697 1249.60082993586 45.985 2 -0.4203288584250278 0.11562441282476128 0.890985870389763 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'nc|ENSG00000141449|Q9C091-4|GREB1L', 'ENST00000578368.5_1_18:18963479-19048745:+|nuORF', 'ENST00000584446.5_1_18:18963479-19034595:+|nuORF'] 119518 18341 VASGEKKNSV True PC9_epitope_Rep5 1017.5454733806099 1017.54436993586 75.563 2 -0.4203687820065535 0.11562441282476128 0.8910263806366762 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 69460 10141 LVAASQAALG True PC9_epitope_Rep6 899.5076313199099 899.50652993586 49.627 2 -0.4203764069948706 0.11562441282476128 0.8910341172776028 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 94904 7359 RTELLTEA True NCI_RA007_Epitope_Rep4 931.49746055903 931.49636993586 34.946 2 -0.42037761400624163 0.11562441282476128 0.891035341951628 ['ENSG00000138246|ENST00000260818|DNAJC13'] 57902 7939 LEGAQVLRSR True PC9_epitope_Rep5 1127.64110510095 1127.63944490379 35.477 3 -0.4204166183318965 0.11562441282476128 0.891074915335536 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 68314 20755 LTELCKMAK True PC9_epitope_Rep1 1035.5456737047498 1035.5445699358602 84.661 2 -0.4204259851577473 0.11563951899426073 0.8910844183266314 ['nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7', 'NLRP7|p.E214Sfs*13|1|0.29|ENSG00000167634|chr19:54940179-54940179|C/-|frameshift_variant'] 116825 16010 TVEIDNPEL True PC9_epitope_Rep5 1028.5026055091198 1028.5015099358602 66.573 2 -0.42051229084891945 0.11565067381761661 0.8911719696474745 ['ENSG00000131697|ENST00000378156|NPHP4', 'ENST00000489180.6_1_1:5923327-5936049:-|nuORF'] 959 14162 ADSEALFGVP True NCI_RA007_Epitope_Rep3 1004.4814761417199 1004.48097496793 62.995 1 -0.42051718891744155 0.11565067381761661 0.8911769379218788 ['ENSG00000173214|ENST00000671876|MFSD4B'] 100525 15534 SLATLMMEVP True PC9_epitope_Rep3 1090.54025397114 1090.53914993586 64.901 2 -0.42057624583123376 0.11565067381761661 0.8912368372023267 ['TBX22|p.P405T|1|0.61|ENSG00000122145|chrX:80030761-80030761|C/A|missense_variant'] 61258 13002 LINYDKEHIP True PC9_epitope_Rep4 1240.6451874218799 1240.6435349037902 57.908 3 -0.4207666864023816 0.11566507847055006 0.8914299422763439 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 53086 4168 KPPPPPPPP True PC9_epitope_Rep6 922.5276384884999 922.52654993586 22.975 2 -0.42078522535990076 0.11566507847055006 0.8914487363822299 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 56645 8928 LDINKEKPGAS True H1975_Epitope_Rep3 1170.6244519773 1170.62334993586 39.339 2 -0.42080182356022694 0.11566507847055006 0.8914655623824508 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 23482 10056 EVTYDGVHVP True H1975_Epitope_Rep1 1114.5294889632999 1114.52838993586 43.621 2 -0.42081758619687626 0.11566507847055006 0.8914815407931111 ['FLNA|p.P1051H|1|0.29|ENSG00000196924|chrX:154361363-154361363|G/T|missense_variant'] 86404 16480 QKHFFYFPVIY True H1975_Epitope_Rep2 1487.76015760447 1487.75906993586 68.607 2 -0.4208456181300619 0.11566507847055006 0.8915099551101098 ['ENSG00000153066|ENST00000283033|TXNDC11', 'nc|ENSG00000153066|Q6PKC3|TXNDC11', 'nc|ENSG00000153066|Q6PKC3-3|TXNDC11'] 44097 4170 IINGKVGG True PC9_epitope_Rep4 756.4493881677998 756.44828993586 22.391 2 -0.42089521093425103 0.11566507847055006 0.8915602201936892 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 57477 12452 LEDDSMSVIEP True PC9_epitope_Rep1 1233.54348434493 1233.54238993586 52.763 2 -0.4209130474349235 0.11566507847055006 0.8915782971678444 ['ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1'] 84074 4052 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 20.449 2 -0.4209180615670279 0.11566507847055006 0.8915833787753876 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 45372 20391 IQDNYLLI True PC9_epitope_Rep4 990.5385970950199 990.5380449679301 86.58 1 -0.4209495106356491 0.11566507847055006 0.8916152497984842 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant', 'FAT3|p.H1979Tfs*13|1|0.35|ENSG00000165323|chr11:92799397-92799397|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7-2|FAT3', 'FAT3-DPP3|1|fusion'] 108781 13580 SYSYVLFSI True PC9_epitope_Rep1 1077.53826274185 1077.5371699358602 57.091 2 -0.4209505190780426 0.11566507847055006 0.8916162717353303 ['ENSG00000149133|ENST00000278409|OR5F1'] 119033 14903 VAFSPVTEL True H1975_Epitope_Rep3 961.51204799401 961.51149496793 62.712 1 -0.42096229235269755 0.11567820488737854 0.8916282023887206 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 59486 8850 LFQTRMERP True H1975_Epitope_Rep2 1176.6073624445198 1176.60571490379 39.008 3 -0.4209991713967665 0.11567820488737854 0.8916655724396194 ['ENST00000473607.5_1_3:125854214-125879740:-|nuORF'] 81549 9261 PLKEEEYRKLR True H1975_Epitope_Rep1 1459.8147123584697 1459.81360993586 40.534 2 -0.4210947911381624 0.1157103825136612 0.8917624512634037 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 141962 13096 YVIEDDVNM-[Oxidation] True PC9_epitope_Rep4 1112.46959150912 1112.4684899358601 58.266 2 -0.4211235069041911 0.11574058263037465 0.8917915411803108 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 44947 4754 INYTEKEGP True NCI_RA007_Epitope_Rep4 1049.5029398622898 1049.50184993586 24.72 2 -0.4211252226886591 0.11574058263037465 0.8917932792622542 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000546416.5_1_12:95425225-95443026:-|nuORF', 'nc|ENSG00000120798|P13056-2|NR2C1', 'nc|ENSG00000120798|P13056-3|NR2C1'] 41166 11663 HVGCTNSSWVL True PC9_epitope_Rep4 1201.55499251849 1201.55335490379 52.623 3 -0.42117660990997513 0.11575568191520243 0.8918453312323301 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant'] 45923 11120 ISEERFRQLE True H1975_Epitope_Rep3 1305.66771377161 1305.6666099358602 47.868 2 -0.4212523140444825 0.11577078068437949 0.8919220038654986 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000547260.5_1_12:49162376-49164981:-|nuORF'] 134429 23699 VYPLYTIVF True PC9_epitope_Rep5 1113.6110337592897 1113.60992993586 96.138 2 -0.42129769156789915 0.11581805142915685 0.8919679556998599 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 12401 11564 DITERLILPR True H1975_Epitope_Rep1 1224.7190210684798 1224.7179299358602 49.467 2 -0.42129804318800496 0.11581805142915685 0.891968311751912 ['ENSG00000154845|ENST00000400556|PPP4R1', 'nc|ENSG00000154845|Q8TF05-2|PPP4R1', 'ENST00000285124.12_1_18:9562972-9595043:-|nuORF'] 44003 15572 IIGEHIVTG True PC9_epitope_Rep2 937.5232813840499 937.52218993586 65.173 2 -0.4214462597646422 0.11586334067510116 0.8921183713329245 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1'] 43748 7607 IHHWRDRRHQK True NCI_RA007_Epitope_Rep1 1567.8344937999502 1567.8328349037902 33.581 3 -0.4214536454914385 0.11586334067510116 0.8921258475771812 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T'] 59794 19761 LGELWLGLL True PC9_epitope_Rep3 1012.5957180483199 1012.59462993586 81.24 2 -0.42147851423101584 0.11586334067510116 0.8921510201738896 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 70921 21110 LYFIVIYIF True NCI_RA007_Epitope_Rep4 1189.6787193962898 1189.67762993586 91.529 2 -0.42154309668773954 0.1159125832337374 0.8922163850264655 ['ENST00000305366.7_1_3:149087371-149087659:-|nuORF'] 126484 8982 VLLKAQQVE True H1975_Epitope_Rep1 1026.60734536118 1026.6062499358602 39.454 2 -0.42162512305492494 0.1159217400211698 0.8922993910877115 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A'] 71198 18109 LYPDHFHLL True PC9_epitope_Rep2 1153.59202965021 1153.5903749037902 74.959 3 -0.42163103031555793 0.1159217400211698 0.8923053682935201 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 122099 14567 VGAAVVVAE True PC9_epitope_Rep6 813.4596184983299 813.4590749679301 67.93 1 -0.4216520813664352 0.1159217400211698 0.8923266679324597 ['PGM2L1|p.S452G|1|0.65|ENSG00000165434|chr11:74342973-74342973|T/C|missense_variant'] 5415 8375 ALTFIEVP True H1975_Epitope_Rep2 888.4956696538799 888.49456993586 37.167 2 -0.4217041405454471 0.1159217400211698 0.8923793373783576 ['ENST00000313486.11_1_17:1422233-1422356:-|nuORF'] 15555 6961 EAQAELQKRDE True H1975_Epitope_Rep3 1315.63680756615 1315.6357099358602 31.737 2 -0.42173919762630735 0.1159368331199317 0.8924148018018105 ['nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 109918 10294 TEFRERLS True PC9_epitope_Rep3 1036.5301576696397 1036.5290699358602 44.544 2 -0.4218479688414342 0.11595192570335974 0.8925248182310531 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 79544 4721 PDDEWVKNR True NCI_RA007_Epitope_Rep5 1157.5465360097699 1157.54488490379 24.843 3 -0.42185993693532287 0.11596701777148027 0.8925369216050354 ['FBXL5|p.L419Ffs*16|1|0.08|ENSG00000118564|chr4:15625845-15625846|-/A|frameshift_variant', 'nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 34509 7706 GPPNPWPVG True PC9_epitope_Rep2 919.4552018242299 919.45410993586 35.017 2 -0.42205243245527074 0.1159801293979071 0.8927315453557481 ['ENST00000414660.1_1_X:44493047-44494475:+|nuORF'] 7466 17334 ASATSAFVSI True PC9_epitope_Rep2 952.4865615221601 952.48546993586 71.93 2 -0.42208112634339845 0.1159801293979071 0.8927605487464813 ['nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1', 'ENSG00000101391|ENST00000346416|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1'] 101218 10581 SLHGTLQRRY True H1975_Epitope_Rep3 1229.66290317469 1229.6618099358602 45.77 2 -0.4220900717162678 0.11599522021167634 0.892769590193889 ['ENST00000485594.1_1_1:161089027-161090552:+|nuORF'] 79134 4699 PALPPQAH True PC9_epitope_Rep6 829.44463714053 829.44354993586 25.458 2 -0.4221631106203699 0.11601945890586328 0.8928434061665688 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 58103 13907 LEKEHEAI True PC9_epitope_Rep1 967.4974605590298 967.49636993586 58.331 2 -0.4222013063607592 0.11601945890586328 0.8928820030196883 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 41164 4387 HVFRGLGSLDR True NCI_RA007_Epitope_Rep2 1255.6785532388299 1255.67689490379 21.701 3 -0.422220715655295 0.11601945890586328 0.8929016147522215 ['ENSG00000186907|ENST00000335099|RTN4RL2'] 78271 11911 NYIEKVVAI True NCI_RA007_Epitope_Rep5 1047.59644632431 1047.5953499358602 52.473 2 -0.4223191469647542 0.11601945890586328 0.8930010582170943 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 27194 9516 FLLPRLDTSNE True H1975_Epitope_Rep3 1303.67721582615 1303.67610993586 41.609 2 -0.42232549888732235 0.11601945890586328 0.8930074746215853 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 60481 9684 LGYRKYRRQR True NCI_RA007_Epitope_Rep4 1394.8007340601798 1394.7996299358601 44.099 2 -0.4224033661655313 0.11605161642713276 0.8930861241098582 ['nc|ENSG00000186448|O14709-2|ZNF197'] 60705 14508 LHPVSAIISL True PC9_epitope_Rep4 1048.62808080576 1048.6269899358601 63.719 2 -0.422439989669879 0.1160647231514986 0.8931231102090809 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 14076 10664 DRRRRRRRR True NCI_RA007_Epitope_Rep5 1381.8463958963298 1381.8447449037901 47.656 3 -0.4224721103125146 0.1160647231514986 0.893155546059817 120614 7953 VEHSREYKQER True H1975_Epitope_Rep3 1459.71678922235 1459.7156899358602 35.56 2 -0.42252638396402586 0.11607981020328048 0.8932103463320848 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant', 'RYR2|p.N3207Kfs*49|1|0.52|ENSG00000198626|chr1:237706985-237706986|-/T|frameshift_variant', 'RYR2|p.K1840Sfs*6|1|0.05|ENSG00000198626|chr1:237614645-237614645|G/-|frameshift_variant', 'RYR2|p.A2213Lfs*22|1|0.25|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant', 'RYR2|p.Q1498Kfs*30|1|0.28|ENSG00000198626|chr1:237595550-237595550|G/-|frameshift_variant', 'RYR2|p.L1658Sfs*49|1|0.23|ENSG00000198626|chr1:237614100-237614100|C/-|frameshift_variant'] 117714 18231 TVVAPEQNL True PC9_epitope_Rep6 969.5131106231701 969.51200993586 82.767 2 -0.4225674330750488 0.11609489674005803 0.8932517887350813 ['nc|ENSG00000118733|Q96PB7-4|OLFM3', 'nc|ENSG00000118733|Q96PB7-2|OLFM3', 'OLFM3|p.G402Wfs*27|1|0.2|ENSG00000118733|chr1:101804471-101804472|-/A|frameshift_variant', 'ENSG00000118733|ENST00000370103|OLFM3', 'nc|ENSG00000118733|Q96PB7|OLFM3'] 110070 10229 TELNFESMVP True PC9_epitope_Rep1 1165.53252573841 1165.5314299358602 44.226 2 -0.4226145732575327 0.11612308637550561 0.893299375221938 ['ENST00000355086.7_1_12:64238100-64238409:+|nuORF'] 128681 16095 VPVSGPALTG True PC9_epitope_Rep1 896.4967322830399 896.49562993586 66.726 2 -0.4226912991499341 0.11612308637550561 0.8933768152413311 ['ENST00000403027.6_1_5:154238316-154238370:+|nuORF', 'ENST00000517568.5_2_5:154238316-154242796:+|nuORF'] 37476 17736 GVVAGVVAV True PC9_epitope_Rep5 769.4697892592098 769.46868993586 73.239 2 -0.42269267379890085 0.11612308637550561 0.893378202545573 ['ENSG00000156453|ENST00000287008|PCDH1', 'nc|ENSG00000156453|Q08174|PCDH1', 'ENST00000511044.1_1_5:141242715-141245657:-|nuORF'] 53831 10284 KTFGQAVSL True PC9_epitope_Rep2 949.5232813840498 949.52218993586 44.888 2 -0.4227248696104674 0.11613420711311352 0.8934106933509335 ['ENSG00000124444|ENST00000336564|ZNF576'] 81070 15717 PISDTIIP True H1975_Epitope_Rep2 854.4749342092999 854.47382993586 65.623 2 -0.42278601066671895 0.11613420711311352 0.8934723871621902 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1'] 68274 8341 LTEEAKNWAP True NCI_RA007_Epitope_Rep2 1157.57168812845 1157.5705899358602 37.084 2 -0.4227867749347521 0.11613420711311352 0.8934731582777712 ['ENSG00000007908|ENST00000333360|SELE'] 79650 7040 PDQELAPASEP True NCI_RA007_Epitope_Rep2 1152.5298828861198 1152.52878993586 32.008 2 -0.42280064774335663 0.1161663566394184 0.8934871551149953 ['nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A'] 113657 7493 TLWDSLEEP True PC9_epitope_Rep6 1088.50260550912 1088.5015099358602 38.07 2 -0.4228142400232854 0.11618143963957814 0.8935008684253023 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 10933 11660 DAETSDLWR True H1975_Epitope_Rep3 1091.4883524273098 1091.48724993586 49.985 2 -0.4228517622901881 0.1161905737005563 0.8935387222801666 ['LCE3E|p.G74Afs*45|1|0.13|ENSG00000185966|chr1:152565988-152565988|C/-|frameshift_variant'] 57421 12441 LEATGLALS True H1975_Epitope_Rep2 873.48074786573 873.4801949679301 52.942 1 -0.42288440041333447 0.1161905737005563 0.8935716458094041 ['ENSG00000170458|ENST00000302014|CD14'] 56416 13307 LDEEEDMVI True PC9_epitope_Rep2 1091.4692567755098 1091.46814993586 56.461 2 -0.4229285566885213 0.1161905737005563 0.8936161837242903 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-3|HS2ST1'] 74193 8732 NEEYSLWVYQC True H1975_Epitope_Rep3 1432.5969169001198 1432.5958099358602 38.591 2 -0.42293515935359843 0.1161905737005563 0.8936228430111315 ['ENST00000460720.5_1_2:9546965-9548358:-|nuORF', 'ENST00000490426.5_1_2:9546965-9563580:-|nuORF', 'ENSG00000119185|ENST00000355346|ITGB1BP1'] 7556 7738 ASEILQDVDQY True H1975_Epitope_Rep2 1279.5932114186699 1279.5921099358602 34.716 2 -0.42300724834779396 0.11620367210429322 0.8936955426579756 ['nc|ENSG00000293419|Q7Z5A4|PRSS42P'] 94486 10437 RRRRRRRPLWR True H1975_Epitope_Rep1 1663.0355936483397 1663.0339349037902 45.1 3 -0.4230083720582893 0.11620367210429322 0.8936966757774193 ['ENSG00000171873|ENST00000379453|ADRA1D'] 133822 14379 VYGDFQEAF True NCI_RA007_Epitope_Rep4 1074.4658260775798 1074.46472993586 62.617 2 -0.42303577279167603 0.1162147866295835 0.8937243048938954 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A'] 14508 7602 DTLEPLKNP True H1975_Epitope_Rep1 1025.53932537101 1025.53822993586 34.232 2 -0.4231177331891625 0.1162147866295835 0.8938069363887824 ['nc|ENSG00000196220|O43295-2|SRGAP3', 'ENSG00000196220|ENST00000383836|SRGAP3'] 33758 18286 GLKIGDTV True PC9_epitope_Rep5 801.45961849833 801.45852993586 75.352 2 -0.42313930479080025 0.1162147866295835 0.8938286816096477 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 142146 21084 YVRRLERK True PC9_epitope_Rep6 1118.6672602791398 1118.6661699358601 93.925 2 -0.4231676192598706 0.11622193407493346 0.893857222056644 ['ENSG00000213380|ENST00000306875|COG8'] 6967 18553 AQLDPEALGNI True PC9_epitope_Rep6 1139.58225281215 1139.5811499358601 84.003 2 -0.42320957609207727 0.11622193407493346 0.8938995097463449 ['ENSG00000134690|ENST00000373055|CDCA8'] 4509 7287 AKEKNWCHICK True H1975_Epitope_Rep1 1358.65874639438 1358.65764993586 33.042 2 -0.4232163592822225 0.11622193407493346 0.8939063459768917 ['ENST00000394205.7_2_4:141302621-141302744:+|nuORF'] 142667 20720 YYPNPPLVL True PC9_epitope_Rep4 1074.57498260374 1074.57447496793 87.862 1 -0.4232251682086288 0.11622193407493346 0.8939152235966448 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 113565 6809 TLTVTSTLP True NCI_RA007_Epitope_Rep1 931.52261267771 931.52150993586 30.493 2 -0.42325169635184245 0.11622193407493346 0.8939419573319999 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE', 'ENST00000521393.1_1_14:106188133-106188816:-|nuORF'] 81550 9261 PLKEEEYRKLR True H1975_Epitope_Rep3 1459.8147123584697 1459.81360993586 40.614 2 -0.4233933855624243 0.1162481233792821 0.8940847119606419 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 48843 3683 KDYIQKFDLDI True NCI_RA007_Epitope_Rep2 1396.7238316653998 1396.72219490379 18.975 3 -0.4233935492602776 0.1162481233792821 0.8940848768574245 ['ENST00000285968.10_1_7:135333176-135333287:+|nuORF'] 45138 18451 IPNIAPDI True PC9_epitope_Rep4 851.47526856247 851.47416993586 79.042 2 -0.4234014765752389 0.1162481233792821 0.8940928621436351 ['nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 82052 17992 PLYIGEVVL True NCI_RA007_Epitope_Rep3 1001.57973363101 1001.57862993586 78.839 2 -0.4234053439712669 0.1162481233792821 0.8940967577582314 ['ENSG00000255154|ENST00000461393|HTD2'] 19556 10143 ELQCLALAPQ True H1975_Epitope_Rep3 1084.5586809165998 1084.55758993586 44.059 2 -0.42347711051348963 0.1163314396847331 0.8941690404193722 ['ENST00000464395.1_1_10:3185767-3189991:-|nuORF'] 125253 20612 VILDLPLVI True NCI_RA007_Epitope_Rep3 993.6474192680099 993.64632993586 89.785 2 -0.42351472981986454 0.11635563440346627 0.8942069245449791 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP'] 23565 18034 EVWRQRYQSHP True PC9_epitope_Rep2 1484.7272943364 1484.72563490379 74.673 3 -0.4235236421780784 0.11635563440346627 0.8942158990623944 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 19617 16863 ELQQVLQLSL True PC9_epitope_Rep2 1169.6655885132898 1169.66448993586 70.111 2 -0.4235237877162033 0.11635563440346627 0.8942160456137317 ['ENSG00000076513|ENST00000261739|ANKRD13A'] 127800 13595 VPEDQIVI True NCI_RA007_Epitope_Rep3 911.4963979298699 911.49530993586 60.773 2 -0.4235433462759367 0.11635563440346627 0.8942357397978187 ['SORCS3|p.L1045V|1|0.68|ENSG00000156395|chr10:105252802-105252802|C/G|missense_variant'] 20133 5607 ENAELDVP True NCI_RA007_Epitope_Rep2 885.4079768482899 885.40686993586 26.426 2 -0.423553311945157 0.11635563440346627 0.8942457741597568 ['CON__Q28194', 'THBS1|p.N973Mfs*26|1|0.09|ENSG00000137801|chr15:39593147-39593147|A/-|frameshift_variant', 'nc|ENSG00000137801|P07996-2|THBS1', 'ENSG00000137801|ENST00000260356|THBS1'] 103251 11940 SPLHLAVEA True PC9_epitope_Rep6 935.5076313199099 935.50652993586 57.172 2 -0.423584835015391 0.11640482404516998 0.8942775126823043 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 55987 12847 LASEVQAL True PC9_epitope_Rep2 829.4545331178898 829.45342993586 54.716 2 -0.4235952700022969 0.11641791044776119 0.8942880183748148 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant', 'TNXB|p.P94S|1|0.42|ENSG00000168477|chr6:32097919-32097919|G/A|missense_variant', 'ENST00000486148.1_1_6:32065519-32065975:-|nuORF'] 19726 20557 ELRRLFRERYR True H1975_Epitope_Rep3 1592.9011763774397 1592.90006993586 85.923 2 -0.4236022815633904 0.11641791044776119 0.8942950772729504 ['ENSG00000184292|ENST00000371225|TACSTD2'] 121768 5500 VFNGHRGQRW True NCI_RA007_Epitope_Rep3 1255.6322717527498 1255.63116993586 28.637 2 -0.4237059533273884 0.11642901002933752 0.8943994327618681 ['nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant'] 111572 5398 TICSAWFPP True H1975_Epitope_Rep2 1020.4738886634799 1020.47278993586 25.796 2 -0.42371086905987687 0.11642901002933752 0.8944043801583902 ['ENST00000370351.8_1_20:61598972-61599257:+|nuORF'] 112394 17634 TLATRRSL True PC9_epitope_Rep5 916.54541381096 916.54430993586 72.841 2 -0.42372782433477196 0.11642901002933752 0.8944214441216134 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 33437 18419 GLAISQLVDV True PC9_epitope_Rep6 1013.57571087973 1013.5746099358599 83.494 2 -0.4237909713345407 0.11647819338552594 0.894484988709618 ['ENSG00000169684|ENST00000299565|CHRNA5'] 63967 20317 LNVAQLLL True PC9_epitope_Rep6 882.5538532363399 882.55274993586 90.855 2 -0.4238473806811767 0.11651031894934334 0.8945417435831505 ['nc|ENSG00000029534|P16157-14|ANK1', 'nc|ENSG00000029534|P16157-8|ANK1', 'nc|ENSG00000029534|P16157-12|ANK1', 'nc|ENSG00000029534|P16157-21|ANK1', 'nc|ENSG00000029534|P16157|ANK1', 'ENSG00000029534|ENST00000289734|ANK1', 'nc|ENSG00000029534|P16157-16|ANK1', 'nc|ENSG00000029534|P16157-5|ANK1', 'nc|ENSG00000029534|P16157-10|ANK1', 'nc|ENSG00000029534|P16157-15|ANK1', 'nc|ENSG00000029534|P16157-13|ANK1', 'nc|ENSG00000029534|P16157-4|ANK1', 'nc|ENSG00000029534|P16157-7|ANK1', 'nc|ENSG00000029534|P16157-6|ANK1', 'nc|ENSG00000029534|P16157-9|ANK1', 'nc|ENSG00000029534|P16157-11|ANK1', 'nc|ENSG00000029534|P16157-2|ANK1', 'ANK1|p.G229V|1|0.42|ENSG00000029534|chr8:41724481-41724481|C/A|missense_variant'] 30858 5275 GAPLPLPQES True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 25.372 2 -0.42390602670378763 0.11667889000699289 0.8946007391414076 ['ENSG00000044459|ENST00000380647|CNTLN', 'nc|ENSG00000044459|Q9NXG0|CNTLN', 'CNTLN|p.S587Ifs*10|1|0.14|ENSG00000044459|chr9:17340939-17340940|-/TATTAATATAATGTTT|frameshift_variant'] 86944 14023 QLVERLVAV True PC9_epitope_Rep4 1025.6233297784897 1025.62222993586 61.85 2 -0.4239210140459219 0.11669395551917042 0.8946158142187446 ['ENST00000592802.1_1_17:73847561-73851408:-|nuORF'] 85509 21502 QFVVTTNPV True PC9_epitope_Rep2 1003.5338460677499 1003.53274993586 88.176 2 -0.423965414614857 0.11670902051745605 0.894660470893446 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF'] 97237 10462 SEAAAASAFLA True H1975_Epitope_Rep1 1007.4923751785899 1007.49126993586 45.197 2 -0.42416443326507763 0.1168414769335721 0.8948605669506741 ['ENSG00000111145|ENST00000228741|ELK3'] 105912 9349 SSRSSSESSY True H1975_Epitope_Rep1 1075.44179615771 1075.44068993586 40.868 2 -0.4241652855322332 0.1168414769335721 0.894861423581965 ['ENSG00000154783|ENST00000285046|FGD5'] 4315 20449 AIIPYFITL True NCI_RA007_Epitope_Rep3 1049.61611913973 1049.61502993586 89.093 2 -0.4242514983573628 0.11687359301453032 0.894948066782838 ['ENSG00000177272|ENST00000369769|KCNA3', 'KCNA3|p.V409Sfs*32|1|0.4|ENSG00000177272|chr1:110673585-110673585|C/-|frameshift_variant', 'KCNA1|p.S447Lfs*3|1|0.29|ENSG00000111262|chr12:4912715-4912715|C/-|frameshift_variant', 'ENSG00000111262|ENST00000382545|KCNA1', 'ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000177301|P16389-2|KCNA2'] 66663 13893 LSKTESISV True PC9_epitope_Rep5 962.52842633414 962.5273299358599 58.459 2 -0.42435217924350155 0.11688865392158534 0.8950492223364784 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 81383 19993 PLDQTLPLQ True PC9_epitope_Rep3 1023.5600608155898 1023.55947496793 82.148 1 -0.4244840717100642 0.11693383356070941 0.8951816906987298 ['PLEKHA7|p.R457L|1|0.21|ENSG00000166689|chr11:16817296-16817296|C/A|missense_variant'] 72710 19353 MMVHIVFKVA True NCI_RA007_Epitope_Rep2 1173.6402427959301 1173.63859490379 80.182 3 -0.42452576802007047 0.11693383356070941 0.895223558157881 ['ENSG00000278685|ENST00000615129|IQCA1L'] 83261 9621 PTAEGLAAA True PC9_epitope_Rep1 799.4075829254699 799.40648993586 41.862 2 -0.4245300027362877 0.11693383356070941 0.8952278099615207 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 5309 10651 ALQRWQDEL True PC9_epitope_Rep5 1157.5829215184897 1157.58127490379 45.956 3 -0.4245723165021557 0.11698100337641963 0.8952702914763069 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2'] 46905 12363 ITLVHQFYFP True H1975_Epitope_Rep2 1263.66519459047 1263.66355490379 52.639 3 -0.42457666593730775 0.11698100337641963 0.8952746578458192 ['ENST00000502953.1_1_5:54623411-54635894:+|nuORF'] 3652 9697 AGPRVTLAA True PC9_epitope_Rep5 854.4974009893799 854.49630993586 42.267 2 -0.4246831905071236 0.11702816997476298 0.8953815791373865 ['ENST00000323249.7_1_5:176881025-176882032:+|nuORF', 'ENST00000502922.5_1_5:176873849-176882032:+|nuORF'] 135527 24636 WKKKSLIQKLI True NCI_RA007_Epitope_Rep1 1383.8965915076299 1383.89494490379 102.03 3 -0.4246862340159252 0.11702816997476298 0.8953846334704109 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 110205 4387 TEQIRREIAA True H1975_Epitope_Rep3 1185.6465844042102 1185.64492490379 21.995 3 -0.4247133113420763 0.11703923474346514 0.8954118058439805 ['ENSG00000019995|ENST00000359653|ZRANB1'] 72884 9765 MPSRPEASL True PC9_epitope_Rep1 986.4855159763399 986.48440993586 42.422 2 -0.4247489154894252 0.11703923474346514 0.8954475315355297 ['ENST00000549913.6_1_12:113306162-113306792:+|nuORF'] 13336 8654 DLVIGFNSGF True H1975_Epitope_Rep1 1067.52876068731 1067.52766993586 38.217 2 -0.4248255051189107 0.11703923474346514 0.8955243693537986 ['nc|ENSG00000141497|Q9H091-2|ZMYND15', 'ENSG00000141497|ENST00000433935|ZMYND15'] 4629 11835 ALAALMIA True PC9_epitope_Rep1 772.4516966669199 772.45058993586 50.389 2 -0.42490768756966296 0.11706734867860187 0.8956067978659941 ['ENSG00000167311|ENST00000397068|ART5', 'ART5|p.P86Lfs*9|1|0.17|ENSG00000167311|chr11:3640172-3640172|G/-|frameshift_variant', 'nc|ENSG00000167311|Q96L15-2|ART5'] 919 8195 ADLVPRRGYQE True H1975_Epitope_Rep3 1302.6680481247802 1302.6669499358602 36.502 2 -0.42492935143428734 0.11706734867860187 0.89562852308656 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'nc|ENSG00000066827|Q9P243-3|ZFAT'] 60550 9102 LHDYCDIIKHP True H1975_Epitope_Rep3 1352.65470655976 1352.65306490379 39.999 3 -0.42493029534902144 0.11706734867860187 0.8956294696412701 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 86456 6718 QKQHQRNYNRW True H1975_Epitope_Rep3 1556.7708904838796 1556.76869987172 30.797 4 -0.4249686782867877 0.11711450589920207 0.8956679575665375 ['nc|ENSG00000196505|Q9NXN4-2|GDAP2', 'ENSG00000196505|ENST00000369443|GDAP2', 'ENST00000464026.1_1_1:118426024-118439585:-|nuORF'] 61301 19584 LIQEELLEK True PC9_epitope_Rep1 1113.6281403754099 1113.6270499358602 80.157 2 -0.4250407157027219 0.11711450589920207 0.895740179535041 ['CCDC18|p.L1097Afs*7|1|0.11|ENSG00000122483|chr1:93254563-93254564|-/GCTTTAAACACTCATAT|frameshift_variant', 'nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18'] 47606 11274 IVWDCVRQRPV True NCI_RA007_Epitope_Rep5 1369.72887455953 1369.7277699358601 50.01 2 -0.4252025505475128 0.11721280731066935 0.8959023691529049 ['DCAF8L2|p.W257C|1|0.18|ENSG00000189186|chrX:27747666-27747666|G/C|missense_variant'] 117257 8817 TVLVDDMLP True PC9_epitope_Rep1 1001.5103337418499 1001.50922993586 38.757 2 -0.42522719574272616 0.11721280731066935 0.8959270610630653 ['ENSG00000103326|ENST00000219611|CAPN15', 'CAPN15|p.D605N|1|0.23|ENSG00000103326|chr16:549442-549442|G/A|missense_variant'] 58408 6432 LENSELKKSLD True H1975_Epitope_Rep1 1274.6717960925398 1274.67068993586 29.801 2 -0.4252487496686475 0.11722186232057008 0.8959486542519594 ['ENSG00000117724|ENST00000366955|CENPF'] 116773 8257 TVDQAVETY True H1975_Epitope_Rep3 1024.47130538084 1024.47020993586 36.746 2 -0.425255259398966 0.11722186232057008 0.8959551755479657 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000574210.5_1_17:2597327-2598221:-|nuORF'] 14872 4529 DWGQRPENK True NCI_RA007_Epitope_Rep5 1128.5312202988 1128.53012993586 24.075 2 -0.4252594833484468 0.11722186232057008 0.8959594069293808 ['ENST00000366997.8_1_1:211916964-211917153:-|nuORF'] 128799 5042 VQADAPHGV True PC9_epitope_Rep3 892.44028003608 892.43918993586 24.482 2 -0.42529092839584376 0.11722186232057008 0.8959909055041958 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 41710 10372 IAKGNNVL True PC9_epitope_Rep4 827.4865019525099 827.48540993586 47.595 2 -0.42533819685806057 0.11723291454288198 0.8960382484481568 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant'] 9257 20569 AVPEVAVYL True PC9_epitope_Rep4 959.5327834385898 959.53168993586 87.27 2 -0.4253700383743965 0.11723291454288198 0.8960701360773518 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 2 5221 AAAAAAAAAAA True PC9_epitope_Rep2 799.41881631551 799.41770993586 25.472 2 -0.42538655649975976 0.11723291454288198 0.8960866768336186 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 81760 19647 PLPIKEYVV True PC9_epitope_Rep4 1056.6219327961599 1056.62082993586 83.69 2 -0.4254251836179373 0.11724796290614026 0.8961253534245376 ['ENST00000380172.8_1_9:21862081-21862168:+|nuORF'] 29053 20950 FTFGAEVVA True PC9_epitope_Rep4 939.4701831820298 939.46963496793 88.744 1 -0.42547577666642555 0.11728005727630704 0.8961760039439499 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENST00000532279.1_1_11:67166350-67167062:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 58422 6423 LEPACHVTSKF True H1975_Epitope_Rep1 1230.60669373818 1230.60505490379 29.766 3 -0.425546230530428 0.11729510432292377 0.8962465239418221 ['nc|ENSG00000126970|Q9NQZ6-4|ZC4H2'] 7851 3574 ASYVASTKYQK True NCI_RA007_Epitope_Rep4 1244.6401020414398 1244.63845490379 19.776 3 -0.4256212036804122 0.1173271967953635 0.8963215496152384 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'ENST00000522792.1_1_5:138268134-138269775:+|nuORF', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 118444 10581 TYPIKTPTF True NCI_RA007_Epitope_Rep3 1066.5698972233001 1066.5688099358601 48.671 2 -0.4256800427219048 0.11734224252548324 0.8963804169217896 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 34434 6339 GPKEPGFEA True PC9_epitope_Rep4 930.4446967101799 930.44358993586 31.458 2 -0.4257228054561182 0.11735328708517274 0.8964231930187799 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 108631 8594 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59198993586 38.418 2 -0.4257465338848364 0.11735328708517274 0.8964469262473463 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 56364 15930 LDDNPQGEVT True PC9_epitope_Rep3 1086.4829326937 1086.48182993586 66.421 2 -0.4257544651779393 0.11735328708517274 0.896454858727889 ['nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 66458 12180 LSGSLDYNVV True PC9_epitope_Rep4 1065.53423999057 1065.5331499358601 54.667 2 -0.42578085093314444 0.11736833134480995 0.8964812469279438 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000446265.3_1:149647111-149647681:+|nuORF'] 141189 21113 YSVLIGHGVC True PC9_epitope_Rep5 1046.52190148506 1046.5208099358601 86.277 2 -0.42580275668250556 0.1174154622307063 0.8965031529458187 ['OR10K2|p.M136I|1|0.09|ENSG00000180708|chr1:158420459-158420459|C/A|missense_variant'] 75705 16371 NLIVLSQHL True PC9_epitope_Rep5 1035.60767971435 1035.60658993586 67.967 2 -0.42583772361176714 0.1174154622307063 0.8965381169862221 ['ENST00000595984.5_1_19:19010755-19014100:-|nuORF', 'ENST00000598969.5_1_19:19010490-19016602:-|nuORF', 'nc|ENSG00000105669|O14579-3|COPE', 'nc|ENSG00000105669|O14579-2|COPE', 'ENSG00000105669|ENST00000262812|COPE'] 57723 16285 LEELKKQQEKE True NCI_RA007_Epitope_Rep2 1400.7511090423998 1400.7500099358601 68.073 2 -0.42591116270858376 0.1174305046614286 0.8966115366937516 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 118481 15654 TYPPSGPTVFP True H1975_Epitope_Rep2 1161.57062549929 1161.5695299358601 65.37 2 -0.4259275143153614 0.11744554657940484 0.8966278815192869 ['nc|ENSG00000104763|Q13510-3|ASAH1'] 82096 11652 PMQPVTAP True PC9_epitope_Rep5 839.4211248146299 839.4205749679301 49.815 1 -0.4260335322066388 0.11749467405198125 0.8967338335696174 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1'] 39811 4904 HNAPPPGT True PC9_epitope_Rep6 789.37695150353 789.37584993586 26.411 2 -0.4260413731599924 0.11750971436362397 0.8967416681435991 ['INO80|p.D257N|1|0.08|ENSG00000128908|chr15:41085473-41085473|C/T|missense_variant'] 99524 18014 SIDRYYAVCDP True PC9_epitope_Rep1 1300.57578753272 1300.57468993586 74.083 2 -0.42622407153632386 0.11762500426054058 0.8969241585944112 ['ENSG00000146399|ENST00000275216|TAAR1'] 127053 13983 VLSQQAYVLF True NCI_RA007_Epitope_Rep5 1166.6335601090198 1166.6324699358602 60.471 2 -0.4262383464828892 0.11762500426054058 0.8969384124836842 ['ENSG00000232399|ENST00000429667|USP17L13', 'ENSG00000223569|ENST00000456464|USP17L15', 'ENSG00000233136|ENST00000457736|USP17L11', 'ENSG00000250844|ENST00000504209|USP17L18', 'ENSG00000250745|ENST00000506151|USP17L20', 'ENSG00000249811|ENST00000506414|USP17L21', 'ENSG00000249104|ENST00000511568|USP17L17', 'ENSG00000248920|ENST00000515566|USP17L19', 'ENSG00000235780|ENST00000515574|USP17L27', 'ENSG00000248933|ENST00000511280|USP17L22', 'ENSG00000232264|ENST00000504481|USP17L24', 'ENSG00000231637|ENST00000511681|USP17L29', 'ENSG00000231051|ENST00000504543|USP17L28', 'ENSG00000230430|ENST00000509271|USP17L25', 'ENSG00000229579|ENST00000509660|USP17L26', 'ENSG00000228856|ENST00000504104|USP17L30', 'ENSG00000227551|ENST00000415041|USP17L12', 'ENSG00000227140|ENST00000507227|USP17L5', 'ENSG00000237038|ENST00000527080|USP17L8', 'ENSG00000223443|ENST00000333796|USP17L2', 'ENSG00000225327|ENST00000530484|USP17L3', 'ENSG00000226430|ENST00000530447|USP17L7', 'ENSG00000230549|ENST00000529559|USP17L1', 'ENSG00000231396|ENST00000417945|USP17L10', 'ENSG00000236125|ENST00000526929|USP17L4', 'nc|ENSG00000205946|Q6QN14|USP17L6P', 'ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 83728 12493 PVGQGYGL True PC9_epitope_Rep6 789.4021036222099 789.4015549679301 59.475 1 -0.4262831778480603 0.11763603210579233 0.8969831731575799 ['ENSG00000123983|ENST00000357430|ACSL3'] 12747 7870 DLEHGVLRLK True NCI_RA007_Epitope_Rep1 1178.6771562564998 1178.67550490379 34.605 3 -0.4262864707250472 0.11763603210579233 0.8969864605692055 ['nc|ENSG00000053702|Q9BQI9-2|NRIP2', 'ENSG00000053702|ENST00000337508|NRIP2'] 99958 12775 SINSHATEWSP True H1975_Epitope_Rep2 1227.55201531303 1227.55090993586 54.243 2 -0.42629988810489444 0.11763603210579233 0.8969998552926248 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 6974 12076 AQLEKVRAEWE True PC9_epitope_Rep5 1357.6990138998897 1357.69735490379 51.445 3 -0.42636777838300777 0.11764505410241118 0.8970676213880958 ['nc|ENSG00000140368|O43586-2|PSTPIP1', 'ENSG00000140368|ENST00000558012|PSTPIP1', 'ENST00000559750.5_1_15:77317886-77323646:+|nuORF', 'ENST00000560377.5_1_15:77317886-77324926:+|nuORF'] 88219 5816 QSAQYLRQ True PC9_epitope_Rep4 992.5039429218 992.50284993586 29.231 2 -0.4263857954128638 0.11764505410241118 0.8970856027796025 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'ENST00000367538.1_1_1:183441704-183485127:+|nuORF'] 27429 21338 FLYPFPLAL True NCI_RA007_Epitope_Rep3 1079.60555445603 1079.6044499358602 92.755 2 -0.426409739002388 0.11764505410241118 0.8971094972624031 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 58886 6588 LETAMHVKEK True NCI_RA007_Epitope_Rep5 1184.62234380232 1184.62124993586 32.001 2 -0.42646715154926446 0.11764505410241118 0.89716678392692 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 8417 15379 ATLTQTLL True PC9_epitope_Rep1 859.5014833103099 859.50038993586 63.973 2 -0.4264773399450157 0.11766008928875711 0.8971769487819017 ['ITGA5|p.E895Kfs*15|1|0.2|ENSG00000161638|chr12:54399908-54399908|C/-|frameshift_variant', 'ENSG00000161638|ENST00000293379|ITGA5', 'ENST00000552564.5_1_12:54797354-54798257:-|nuORF'] 122083 11112 VGAADGLVL True NCI_RA007_Epitope_Rep5 813.45961849833 813.4590749679301 49.377 1 -0.4265109273877658 0.117671113837346 0.8972104560478731 ['ENSG00000146373|ENST00000521654|RNF217'] 94732 3469 RSFMRWYHTVK True NCI_RA007_Epitope_Rep1 1509.7663226974098 1509.76468490379 17.4 3 -0.4265370635001972 0.117671113837346 0.8972365270364101 ['ENST00000421138.6_1_12:21627778-21627829:-|nuORF'] 22586 19131 ETLDSAWL True PC9_epitope_Rep4 933.4443623570099 933.44326993586 81.68 2 -0.426545131210815 0.117671113837346 0.8972445741604397 ['ENST00000433031.1_1_7:57217543-57217852:-|nuORF'] 117103 9659 TVITAAPR True PC9_epitope_Rep5 827.48650195251 827.48540993586 42.12 2 -0.42661738359059914 0.11768614755494973 0.8973166319663584 ['ENSG00000152580|ENST00000282466|IGSF10', 'nc|ENSG00000152580|Q6WRI0-3|IGSF10', 'nc|ENSG00000152580|Q6WRI0-2|IGSF10', 'ENST00000495443.1_1_3:151154479-151158406:-|nuORF'] 27541 10767 FNDGNAAVV True PC9_epitope_Rep5 905.4242956187699 905.42318993586 46.407 2 -0.4267175810870325 0.11770118076025285 0.8974165291229407 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 112053 10221 TISVNVLY True H1975_Epitope_Rep2 907.50148331031 907.50038993586 44.321 2 -0.42677967710502035 0.11775028964765215 0.8974784211206434 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'nc|ENSG00000007174|Q9NYC9-3|DNAH9'] 53531 17802 KRLYYREKKYK True H1975_Epitope_Rep1 1573.90928144965 1573.90818993586 74.122 2 -0.4268347500352509 0.11778235905474248 0.8975333015953465 ['ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4', 'nc|ENSG00000135124|Q99571-2|P2RX4'] 11250 9920 DEESVDSETL True PC9_epitope_Rep5 1122.45644316234 1122.45534993586 43.13 2 -0.4269200846712756 0.11782744991140794 0.8976183165562454 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1'] 13622 7766 DPIYQVWED True NCI_RA007_Epitope_Rep1 1163.51350454599 1163.5124099358602 34.197 2 -0.42694317963781797 0.11782744991140794 0.8976413205027095 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 127044 9647 VLSLLGSGLP True H1975_Epitope_Rep1 954.57498260374 954.57388993586 42.036 2 -0.42695922787228313 0.11782744991140794 0.8976573043563765 ['ENST00000377716.6_1_9:37903591-37903951:-|nuORF'] 98277 7379 SEVHISNISA True H1975_Epitope_Rep2 1055.52473793603 1055.52364993586 33.323 2 -0.42699669462783213 0.11784247917270048 0.8976946171846747 ['ENST00000316963.7_1_8:54975912-55013486:-|nuORF'] 142578 13903 YYLPYYKRERN True PC9_epitope_Rep5 1563.78341223019 1563.78175490379 58.498 3 -0.42702018783295836 0.11785550009369836 0.8977180112798104 ['ENSG00000172071|ENST00000303236|EIF2AK3'] 136289 15058 WSLCLIFVR True PC9_epitope_Rep1 1135.6212216035099 1135.61956490379 62.738 3 -0.42702080690815103 0.11785550009369836 0.8977186277162861 ['ENST00000459961.1_1_1:15653545-15655159:+|nuORF'] 20286 7750 ENRRPLWTWDP True H1975_Epitope_Rep3 1468.7211463267997 1468.72004993586 34.794 2 -0.42712640880914216 0.11788756388415673 0.8978237591159093 ['ENST00000499638.6_1_12:121660646-121661115:+|nuORF'] 68712 17394 LTKQCVLI True PC9_epitope_Rep5 916.5415743004799 916.54046993586 71.907 2 -0.4271948149915847 0.11791962658217066 0.8978918387893783 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 5725 8640 APAPLTSA True PC9_epitope_Rep3 726.39120458534 726.39065496793 38.185 1 -0.4273149311306989 0.11795168818779599 0.8980113399607295 ['ENSG00000247596|ENST00000305533|TWF2'] 43282 22134 IFSLFDIYS True PC9_epitope_Rep4 1103.55391280599 1103.55337496793 93.354 1 -0.42743793760444704 0.11799475351752801 0.8981336612497759 ['ENST00000301919.8_1_11:105878863-105879127:-|nuORF'] 101068 18972 SLGFEQLSL True PC9_epitope_Rep2 992.51786165044 992.51676993586 78.341 2 -0.4274571056001848 0.11799475351752801 0.8981527173910787 ['ENSG00000187714|ENST00000374115|SLC18A3'] 60302 10247 LGSESVKVAI True NCI_RA007_Epitope_Rep3 1001.5757108797299 1001.5746099358599 47.383 2 -0.42747136874611386 0.11799475351752801 0.8981668964119995 ['HYOU1|p.M45V|1|0.27|ENSG00000149428|chr11:119055802-119055802|T/C|missense_variant'] 30265 7121 FYYSPSGK True H1975_Epitope_Rep3 947.4388830537498 947.43778993586 32.361 2 -0.4274946072452776 0.11799475351752801 0.8981899962150837 ['ENSG00000071655|ENST00000434436|MBD3'] 69966 11714 LVLKSPSLQP True H1975_Epitope_Rep3 1080.6542955536 1080.6531899358602 50.198 2 -0.4275067380667033 0.1180077672548886 0.898202053829862 ['ENST00000273411.2_1_3:134070904-134075258:-|nuORF'] 39872 11719 HPATPRHTHP True PC9_epitope_Rep1 1149.57917355073 1149.57751490379 49.952 3 -0.4275084221494421 0.1180077672548886 0.8982037277058494 ['ENST00000558388.6_1_15:31515486-31523017:-|nuORF'] 12736 6063 DLEGHHRHTVY True H1975_Epitope_Rep3 1362.6428960061 1362.6412649037902 28.332 3 -0.4275748052796005 0.11802279037285596 0.8982697000010466 ['ENSG00000081479|ENST00000649046|LRP2'] 44829 17201 INDVKELIEEK True H1975_Epitope_Rep1 1328.71874628496 1328.7176499358602 71.619 2 -0.42759788408747523 0.11803781297904957 0.898292632082693 ['ENSG00000109576|ENST00000337664|AADAT', 'nc|ENSG00000109576|Q8N5Z0-2|AADAT'] 93814 18963 RRARFWRRHRE True H1975_Epitope_Rep3 1624.9035764192797 1624.9024699358602 79.531 2 -0.4276344686833482 0.11805082436299223 0.898328979957359 ['FOXD4L5|p.V313F|1|0.23|ENSG00000204779|chr9:65283441-65283441|C/A|missense_variant'] 47805 20035 IYGEGFQTW True PC9_epitope_Rep4 1099.4974605590298 1099.49687496793 85.202 1 -0.42767463927738014 0.11805082436299223 0.8983688847785023 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 18168 5272 EIKRQEAI True NCI_RA007_Epitope_Rep4 985.5556441414899 985.55454993586 26.829 2 -0.42768116087926367 0.11806584572411562 0.8983753626540321 ['ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3'] 12480 7137 DKDDYLFQR True PC9_epitope_Rep5 1198.56185172074 1198.56019490379 32.422 3 -0.42780395725166676 0.11811090673751617 0.8984973053915887 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.S1011Vfs*17|1|0.44|ENSG00000143341|chr1:185987523-185987524|-/C|frameshift_variant', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 63215 12072 LLSDTKLEL True PC9_epitope_Rep1 1030.5910265906998 1030.58992993586 51.295 2 -0.42784135211102065 0.11811090673751617 0.8985344288187455 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 24613 21488 FAIPLIEKL True PC9_epitope_Rep2 1042.64266824074 1042.6415699358602 88.124 2 -0.4278594916070967 0.11811090673751617 0.8985524347102855 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 87446 6222 QPYRYTVKA True PC9_epitope_Rep1 1124.59784330664 1124.5961849037901 28.747 3 -0.4280509903140486 0.1181519388293796 0.8987424452596336 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 120488 18589 VEEWPLEAL True PC9_epitope_Rep3 1084.54407639828 1084.5429699358601 76.728 2 -0.42808704043605417 0.1181519388293796 0.8987781992644985 ['ENST00000314289.12_2_4:2515676-2516066:+|nuORF'] 114068 15973 TPESWMVESV True PC9_epitope_Rep2 1163.51687567427 1163.5157699358601 66.693 2 -0.42810203357585225 0.1181519388293796 0.8987930677519054 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 37550 11335 GVVKNNFVP True NCI_RA007_Epitope_Rep3 972.5392658013599 972.53816993586 51.703 2 -0.42815244054392965 0.1181519388293796 0.8988430491696736 ['nc|ENSG00000110680|P06881|CALCA'] 112811 5261 TLIHHNEAVL True NCI_RA007_Epitope_Rep5 1145.61930702721 1145.61820993586 26.932 2 -0.4281839336688221 0.1181519388293796 0.898874271347883 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 61062 12748 LIGGTSGQYY True PC9_epitope_Rep3 1057.5080252427301 1057.5069299358602 54.055 2 -0.42824465201125506 0.11818398555907496 0.8989344562610119 ['LUM|p.F163Sfs*9|1|0.25|ENSG00000139329|chr12:91108494-91108494|G/-|frameshift_variant', 'LUM|p.N268Tfs*24|1|0.28|ENSG00000139329|chr12:91108177-91108177|T/-|frameshift_variant', 'ENSG00000139329|ENST00000266718|LUM'] 16795 8585 EEVGTPHQDVP True PC9_epitope_Rep3 1206.55168095986 1206.5505899358602 37.974 2 -0.42830028989488056 0.1181969893059056 0.8989895925311688 ['ENSG00000125872|ENST00000378858|LRRN4'] 2897 6271 AEVWSEITV True H1975_Epitope_Rep2 1032.51277627 1032.51166993586 29.066 2 -0.4283276286587807 0.1181969893059056 0.8990166803111985 ['nc|ENSG00000188343|A1XBS5-5|CIBAR1', 'ENST00000523577.5_1_8:94712794-94713716:+|nuORF'] 102308 5078 SLSPTDHQAAF True NCI_RA007_Epitope_Rep5 1172.5462016566 1172.5451099358602 26.233 2 -0.4284418269971599 0.11820797929402149 0.8991297979967501 ['ENSG00000165914|ENST00000328459|TTC7B', 'nc|ENSG00000165914|Q86TV6-2|TTC7B'] 102973 20549 SPFEDIFKQCL True H1975_Epitope_Rep1 1325.6325741328499 1325.6314699358602 85.453 2 -0.42844845349006594 0.11820797929402149 0.8991363601804143 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2', 'ENST00000533192.1_1_11:65055200-65062124:+|nuORF'] 75625 15185 NLDYTELGL True H1975_Epitope_Rep2 1036.5076908895599 1036.5065899358601 63.566 2 -0.4284642405404869 0.11820797929402149 0.8991519933088957 ['ENSG00000133872|ENST00000256255|SARAF'] 42219 14475 IDSEPECP True PC9_epitope_Rep3 888.3534987472799 888.35240993586 60.787 2 -0.42848953727078276 0.11822098111665447 0.8991770413092961 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000472593.1_1_3:183521690-183528368:+|nuORF'] 112071 14868 TITLQLSTLTK True NCI_RA007_Epitope_Rep1 1217.7231033894097 1217.7220099358601 61.892 2 -0.4285055707664061 0.11822098111665447 0.8991929158215648 ['ENST00000521130.1_1_5:168547122-168727722:-|nuORF'] 107697 8474 SVRRPERRTW True NCI_RA007_Epitope_Rep2 1341.7377994504498 1341.73615490379 37.605 3 -0.4285254088921928 0.11822995590213338 0.8992125558037259 ['ENST00000503886.5_1_10:63170188-63170446:-|nuORF'] 71231 23544 LYPGIVTFVI True PC9_epitope_Rep1 1120.65323292444 1120.65212993586 95.353 2 -0.4285379647247274 0.11822995590213338 0.899224985407429 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1'] 17159 6131 EGQLRSETL True NCI_RA007_Epitope_Rep4 1031.5247379360299 1031.52364993586 30.196 2 -0.428544811557891 0.11822995590213338 0.8992317631382643 ['ENST00000372146.4_1_9:135565236-135565311:+|nuORF'] 127375 21450 VNASRTRI True PC9_epitope_Rep4 915.52501271955 915.52390993586 90.695 2 -0.4285490527110136 0.11822995590213338 0.89923596139209 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 30113 12406 FYLIVFFWMLT True NCI_RA007_Epitope_Rep5 1478.7672171308598 1478.7661099358602 54.376 2 -0.4285742354260298 0.11823691647655692 0.8992608878848878 ['ADGRF5|p.S1099I|1|0.1|ENSG00000069122|chr6:46858607-46858607|C/A|missense_variant'] 117303 8531 TVMLTFFFPG True NCI_RA007_Epitope_Rep5 1158.5783537320199 1158.5772499358602 39.499 2 -0.4286358043297145 0.11823691647655692 0.8993218195275313 ['ENST00000492633.5_1_1:60370173-60378128:-|nuORF'] 60709 17246 LHQEVSVLV True PC9_epitope_Rep5 1022.5760452328999 1022.57494993586 71.352 2 -0.428656433625133 0.11823691647655692 0.8993422318565994 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 105205 10604 SRGTGSFFSAF True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 45.681 2 -0.4286839890721167 0.11823691647655692 0.8993694947876689 ['nc|ENSG00000105993|O75190-4|DNAJB6', 'ENST00000487480.1_1_7:157174896-157178337:+|nuORF', 'nc|ENSG00000105993|O75190-2|DNAJB6', 'nc|ENSG00000105993|O75190-3|DNAJB6', 'ENSG00000105993|ENST00000262177|DNAJB6'] 75642 7166 NLEKTNLGDRR True H1975_Epitope_Rep3 1314.70041088222 1314.6993099358601 32.538 2 -0.42871292787405413 0.11823691647655692 0.8993981230527549 ['ENST00000356721.3_1_16:48399534-48399783:-|nuORF'] 107371 10876 SVLKEVYQA True PC9_epitope_Rep4 1035.5600608155898 1035.5589699358602 49.598 2 -0.4287272217132549 0.11825192802056556 0.8994122622445327 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8'] 55976 8485 LASAGVNTNVR True H1975_Epitope_Rep1 1100.59382055536 1100.59272993586 37.567 2 -0.42878963823512256 0.118300987402111 0.8994739936633672 ['CHAF1B|p.D38N|1|0.21|ENSG00000159259|chr21:36386248-36386248|G/A|missense_variant'] 33756 17153 GLKIGDTV True PC9_epitope_Rep4 801.45961849833 801.45852993586 73.985 2 -0.4288628627326163 0.11831398318068843 0.8995463940115829 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 80619 16578 PGRRPRPGL True PC9_epitope_Rep6 1004.5991807193197 1004.59808993586 76.213 2 -0.42886588053191593 0.11831398318068843 0.899549377370869 ['nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP', 'ENST00000590347.5_1_19:1271297-1272439:+|nuORF', 'ENST00000590704.5_1_19:1271297-1272439:+|nuORF', 'nc|ENSG00000099622|Q14011-3|CIRBP', 'ENST00000591097.5_1_19:1271671-1272439:+|nuORF'] 46853 14348 ITKGLLDNP True PC9_epitope_Rep2 969.5494961318899 969.54838993586 60.451 2 -0.4289005001951166 0.11834400108947296 0.8995835992512496 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 3006 7254 AFKNQTLT True NCI_RA007_Epitope_Rep2 921.49198125577 921.49088993586 32.836 2 -0.4289008819949434 0.11834400108947296 0.8995839766365215 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1', 'SYNJ1|p.D661Efs*36|1|0.04|ENSG00000159082|chr21:32666516-32666519|GTTG/-|frameshift_variant'] 80581 11383 PGPSLSTGL True PC9_epitope_Rep5 827.43888305375 827.43778993586 48.783 2 -0.42895282496645404 0.11834893617021276 0.8996353133852455 ['ENST00000433234.2_11:204190-204341:-|nuORF'] 62672 11152 LLLKREVP True H1975_Epitope_Rep3 966.6226015025 966.62150993586 47.991 2 -0.4289567318043423 0.11834893617021276 0.899639174173923 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENST00000540578.6_1_18:9182415-9235682:+|nuORF'] 78883 8877 PAGALPAAQ True PC9_epitope_Rep2 794.42865272322 794.42754993586 39.498 2 -0.4289571004587087 0.11834893617021276 0.8996395384797505 ['ENST00000332272.8_1_16:75513067-75513235:-|nuORF'] 43779 7980 IHNITHGSGP True H1975_Epitope_Rep3 1031.51484195867 1031.51374993586 35.665 2 -0.42901514159599036 0.11834893617021276 0.8996968879274236 ['ENSG00000183196|ENST00000332272|CHST6'] 100002 15046 SIPVFDLLI True PC9_epitope_Rep1 1015.5953836951498 1015.59428993586 62.693 2 -0.42902504198819674 0.11834893617021276 0.8997066689328062 ['ENSG00000130313|ENST00000252603|PGLS'] 79382 8269 PASPALTAA True PC9_epitope_Rep1 797.42831837005 797.4272299358599 36.64 2 -0.4290317000924534 0.11834893617021276 0.8997132465182361 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 86780 20009 QLLTLASIL True PC9_epitope_Rep5 970.60628273202 970.60518993586 82.019 2 -0.4290895657453228 0.11836686068280064 0.8997704045758856 ['nc|ENSG00000051620|Q9Y5Z4-2|HEBP2', 'ENSG00000051620|ENST00000607197|HEBP2'] 28799 19105 FSVDDVQTV True PC9_epitope_Rep5 1008.4763907612801 1008.47587496793 78.518 1 -0.4291367317934735 0.11836686068280064 0.8998169834847037 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 87671 6125 QQSVIVDGP True H1975_Epitope_Rep2 941.4818104948898 941.4812649679301 28.54 1 -0.4291469679321989 0.11836686068280064 0.8998270909659916 ['ENSG00000108950|ENST00000592554|FAM20A', 'ENST00000226094.9_1_17:66533620-66538255:-|nuORF'] 78904 11207 PAGIGAALY True H1975_Epitope_Rep2 831.4490538146299 831.44850496793 48.148 1 -0.4291597636218382 0.11836686068280064 0.8998397252072493 ['ENST00000367201.7_1_1:204100863-204101031:-|nuORF'] 140222 13268 YQVRNWLI True PC9_epitope_Rep5 1090.59236400338 1090.59126993586 56.046 2 -0.42916165395200445 0.11836686068280064 0.8998415916279121 ['ENST00000279488.7_1_12:89742839-89743004:-|nuORF'] 120502 19498 VEFDFIPDV True H1975_Epitope_Rep3 1079.51752729727 1079.5169749679299 81.714 1 -0.4291655314711064 0.11836686068280064 0.8998454200558038 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 74966 12024 NHNLTEKLL True PC9_epitope_Rep5 1080.5927579262 1080.5916699358602 51.244 2 -0.42917253763562835 0.11836686068280064 0.8998523373583567 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1'] 122776 14933 VGGPEIEVG True PC9_epitope_Rep1 855.4337976733099 855.43324496793 62.263 1 -0.4291741927402672 0.11836686068280064 0.8998539714404374 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 127961 11279 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 48.264 2 -0.42926726984004354 0.11843292091424293 0.8999458476859343 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 1774 16051 AEGVTVQIKAE True PC9_epitope_Rep2 1143.6135529404298 1143.61244993586 66.996 2 -0.4293190899216133 0.11846494213750851 0.8999969832915709 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 68694 11591 LTKKMLYDME True PC9_epitope_Rep5 1270.6301316047 1270.6290299358602 49.581 2 -0.4293710076111856 0.11849292922417168 0.9000482037567106 ['ENSG00000145012|ENST00000617246|LPP'] 78776 4757 PAAPAAEEP True NCI_RA007_Epitope_Rep4 851.40249754503 851.40140993586 24.731 2 -0.42938254468602854 0.11849292922417168 0.90005958433384 ['KIAA1522|p.F728Sfs*88|1|0.28|ENSG00000162522|chr1:32771538-32771538|T/-|frameshift_variant', 'ENSG00000162522|ENST00000401073|KIAA1522'] 44099 5232 IINGKVGG True PC9_epitope_Rep5 756.4493881677998 756.44828993586 25.14 2 -0.42939311160627586 0.11849292922417168 0.9000700074173045 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 136235 12545 WRVNIQRKRRQ True NCI_RA007_Epitope_Rep2 1538.90184508378 1538.90020490379 53.411 3 -0.42943070688634943 0.11850276478094428 0.9001070870777277 ['ENSG00000188227|ENST00000627814|ZNF793', 'nc|ENSG00000188227|Q6ZN11-2|ZNF793'] 57169 16352 LDTVTMQVTA True PC9_epitope_Rep4 1077.53761111885 1077.53650993586 70.862 2 -0.4294681129885011 0.11850276478094428 0.9001439741425686 ['ENSG00000181789|ENST00000314797|COPG1'] 120873 5498 VEMYDLRWDRW True H1975_Epitope_Rep3 1567.7241831019098 1567.7225249037901 26.201 3 -0.4294966283526725 0.11850276478094428 0.9001720897976824 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 38443 4315 HENNNGQAAF True NCI_RA007_Epitope_Rep5 1100.4635346618 1100.4624299358602 23.193 2 -0.42960075084251426 0.11850276478094428 0.900274722999384 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 126797 19311 VLPNRPFGLF True PC9_epitope_Rep5 1158.6549642599398 1158.65332490379 79.326 3 -0.42961991682194767 0.11850276478094428 0.9002936097334187 ['ENSG00000005187|ENST00000289416|ACSM3'] 64581 11437 LPSLLTSDAAP True H1975_Epitope_Rep1 1083.58119018299 1083.58008993586 48.972 2 -0.42966304023355206 0.11850276478094428 0.9003360990141174 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 114062 10239 TPEQIEKIY True H1975_Epitope_Rep2 1119.5811901829898 1119.58008993586 44.39 2 -0.42967863897787 0.11850276478094428 0.9003514663873505 ['ENSG00000086288|ENST00000199447|NME8'] 14585 8195 DTWESLQK True PC9_epitope_Rep2 1005.47672511445 1005.47562993586 36.88 2 -0.42968968418441 0.11850276478094428 0.9003623471232942 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 22891 4631 EVDQVDQKQ True H1975_Epitope_Rep3 1087.5145671751498 1087.51346993586 22.936 2 -0.42971677820369947 0.11850276478094428 0.9003890354422147 ['ENSG00000130396|ENST00000683244|AFDN'] 60482 11596 LGYTGSIVAA True PC9_epitope_Rep6 950.5072969667399 950.50618993586 55.72 2 -0.4297445760536963 0.11850276478094428 0.9004164137226736 ['nc|ENSG00000130021|Q08623-4|PUDP'] 131630 14577 VTLSVPNVS True PC9_epitope_Rep1 914.50729696674 914.50618993586 60.894 2 -0.42975325156539157 0.11850276478094428 0.9004249575981874 ['ENSG00000011454|ENST00000373647|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-3|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-2|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-4|RABGAP1', 'ENST00000317419.7_1_9:125719338-125751780:+|nuORF'] 41823 8732 IAVEIYRWIRD True H1975_Epitope_Rep1 1432.7826839542 1432.7815899358602 38.516 2 -0.4297585252883718 0.11850276478094428 0.9004301511404559 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 61231 15643 LIMECESFENI True PC9_epitope_Rep5 1326.5835753350998 1326.58192490379 65.182 3 -0.42981628677675593 0.11852872624576805 0.9004870264578887 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 117472 13204 TVQWENSF True PC9_epitope_Rep5 1009.4505103666099 1009.44940993586 55.796 2 -0.4298414227789861 0.11852872624576805 0.9005117722531113 ['ENSG00000174231|ENST00000304992|PRPF8'] 46441 8852 ISTCSQGSVP True PC9_epitope_Rep6 977.4487961144499 977.44768993586 43.981 2 -0.42986106908772737 0.11852872624576805 0.9005311116409079 ['ENST00000265071.2_1_5:31323650-31323761:+|nuORF'] 126583 9945 VLLVEMLE True H1975_Epitope_Rep2 944.52525553 944.52414993586 43.242 2 -0.4298733751819038 0.11852872624576805 0.9005432246194935 ['ENSG00000110446|ENST00000227880|SLC15A3'] 4049 9593 AHIEDPED True PC9_epitope_Rep5 924.3824903764399 924.3813899358599 41.86 2 -0.4299036442860151 0.11854372235454236 0.9005730158788631 ['ENSG00000116497|ENST00000373475|S100PBP', 'nc|ENSG00000116497|Q96BU1-2|S100PBP', 'ENST00000531123.5_1_1:33290993-33299636:+|nuORF', 'ENST00000356689.7_1_1:33290993-33299636:+|nuORF'] 19986 11989 ELWNKYRERQR True NCI_RA007_Epitope_Rep1 1576.8222573503997 1576.82116993586 50.621 2 -0.43001281749563053 0.11859072505188663 0.9006804319489469 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1'] 63297 22698 LLSSQLVTL True PC9_epitope_Rep1 972.58554728744 972.58499496793 92.112 1 -0.4300741376849188 0.11859072505188663 0.900740741971376 ['ENST00000414287.5_1_22:49808404-49808650:-|nuORF'] 62662 6662 LLLHSLCPP True H1975_Epitope_Rep3 991.55247333735 991.55136993586 30.577 2 -0.4301529172376995 0.11863570638768393 0.9008181990978773 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF'] 41670 13017 IAGKFKVLGP True PC9_epitope_Rep1 1028.6382515666398 1028.6371499358602 54.94 2 -0.4302234975387044 0.11863570638768393 0.9008875709717407 ['TGM6|p.E503G|1|0.1|ENSG00000166948|chr20:2417403-2417403|A/G|missense_variant'] 515 11770 AAPAQVLAA True PC9_epitope_Rep4 810.4599528514999 810.45884993586 53.04 2 -0.43025108759437725 0.11863570638768393 0.9009146825544504 ['SASH3|p.L141Sfs*54|1|0.39|ENSG00000122122|chrX:129791059-129791059|G/-|frameshift_variant'] 85606 8515 QGIKHPLP True NCI_RA007_Epitope_Rep3 888.5181364339599 888.51702993586 40.566 2 -0.43028980235184766 0.11864666258420085 0.9009527201191415 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF'] 110208 13712 TEQLMKHPFIR True H1975_Epitope_Rep3 1398.7441902704998 1398.74308993586 58.039 2 -0.43029590455032046 0.11864666258420085 0.9009587149608053 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'TNIK|p.P670Qfs*14|1|0.22|ENSG00000154310|chr3:171125916-171125916|G/-|frameshift_variant', 'TNIK|p.K413Gfs*15|1|0.19|ENSG00000154310|chr3:171140499-171140500|CG/-|frameshift_variant'] 6506 8330 APTAITEA True PC9_epitope_Rep3 772.3966838886 772.39613496793 37.013 1 -0.43031767742043386 0.11864666258420085 0.9009801034043662 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 102217 8935 SLSEAKMELRR True NCI_RA007_Epitope_Rep2 1318.7027193813399 1318.7016299358602 39.38 2 -0.4303480840393784 0.11866655327834 0.9010099695626083 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENST00000470191.5_1_9:15845666-15971831:+|nuORF'] 15266 6447 EAESAREQLQ True H1975_Epitope_Rep3 1159.5469299325898 1159.5458299358602 29.772 2 -0.43037298275243624 0.11866655327834 0.9010344225900669 ['nc|ENSG00000066455|Q8TBA6-2|GOLGA5', 'ENSG00000066455|ENST00000163416|GOLGA5'] 58472 18530 LEPWGPQGPQR True PC9_epitope_Rep3 1263.63601972051 1263.6343649037901 76.494 3 -0.4303807790613258 0.11866655327834 0.9010420787662764 ['ENST00000254657.7_1_2:239161608-239161653:-|nuORF'] 7501 11583 ASDLNLLT True NCI_RA007_Epitope_Rep4 845.4494477374501 845.4488949679301 51.501 1 -0.43038828945117025 0.11866655327834 0.9010494539011963 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 32366 17182 GFHRLHDQMV True PC9_epitope_Rep4 1238.59786038998 1238.59621490379 74.096 3 -0.43039264999893917 0.11866655327834 0.9010537358019192 ['ENSG00000110344|ENST00000252108|UBE4A', 'nc|ENSG00000110344|Q14139-2|UBE4A'] 56683 10126 LDKLQSSYF True NCI_RA007_Epitope_Rep2 1099.5549754351498 1099.5538699358601 43.976 2 -0.43039288893056926 0.11866655327834 0.9010539704216665 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.C1821Vfs*7|1|0.06|ENSG00000007174|chr17:11705093-11705094|-/G|frameshift_variant', 'DNAH9|p.V1997Ffs*6|1|0.82|ENSG00000007174|chr17:11742190-11742190|G/-|frameshift_variant', 'DNAH9|p.K2222Sfs*9|1|0.17|ENSG00000007174|chr17:11752883-11752883|C/-|frameshift_variant', 'DNAH9|p.L772Sfs*8|1|0.26|ENSG00000007174|chr17:11651284-11651284|C/-|frameshift_variant'] 94852 4465 RSVAHAAI True PC9_epitope_Rep6 823.46643521427 823.46532993586 24.357 2 -0.4303979090127333 0.11866655327834 0.9010588998487642 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1', 'KNDC1|p.S566Vfs*58|1|0.38|ENSG00000171798|chr10:133195782-133195782|C/-|frameshift_variant', 'ENST00000485110.5_1_10:134974025-134992777:+|nuORF', 'ENST00000478074.5_1_10:134974025-134987473:+|nuORF', 'ENST00000530127.1_1_10:134977709-134992395:+|nuORF'] 114079 8277 TPFMTHQEHSI True PC9_epitope_Rep1 1326.6026709869 1326.6010349037902 36.67 3 -0.43043772131149416 0.11866943301248258 0.9010979891318515 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'RSBN1|p.V415Mfs*25|1|0.09|ENSG00000081019|chr1:113797497-113797498|-/AT|frameshift_variant', 'nc|ENSG00000081019|Q5VWQ0-4|RSBN1'] 33904 21796 GLQLVGYILGL True PC9_epitope_Rep4 1144.68559568188 1144.68448993586 92.032 2 -0.43044123184431576 0.11866943301248258 0.9011014355644597 ['ENSG00000165376|ENST00000336803|CLDN2'] 82583 14388 PPYEQVVK True H1975_Epitope_Rep3 958.5123823471798 958.5118349679301 60.694 1 -0.43045552802812603 0.11866943301248258 0.9011154701274198 ['EGFR-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'ZNF679-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 132544 7456 VVDSNNRERIK True H1975_Epitope_Rep1 1328.7160609463597 1328.7149699358602 33.677 2 -0.4305110396078111 0.11866943301248258 0.9011699569829335 ['ENST00000397387.2_1_13:101408869-101409262:-|nuORF'] 34687 7065 GQDGSPRLRS True NCI_RA007_Epitope_Rep1 1071.54211933567 1071.54102993586 31.476 2 -0.4305425895797801 0.11866943301248258 0.9012009182608361 ['ENST00000432473.1_1_22:42764777-42764903:-|nuORF'] 11222 8904 DEDLTQVNVN True NCI_RA007_Epitope_Rep5 1145.52004647841 1145.51894993586 40.91 2 -0.43055080769700993 0.11866943301248258 0.9012089822852434 ['nc|ENSG00000106278|P23471-3|PTPRZ1', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'PTPRZ1|p.E2050Kfs*21|1|0.36|ENSG00000106278|chr7:122051489-122051489|G/-|frameshift_variant', 'PTPRZ1|p.E687Dfs*38|1|0.07|ENSG00000106278|chr7:122011106-122011107|-/TGAAGTT|frameshift_variant', 'PTPRZ1|p.Q937Sfs*16|1|0.22|ENSG00000106278|chr7:122011854-122011855|-/T|frameshift_variant', 'PTPRZ1|p.N1509Sfs*36|1|0.09|ENSG00000106278|chr7:122013570-122013571|-/TC|frameshift_variant'] 2967 12634 AFFREEDYIR True NCI_RA007_Epitope_Rep1 1344.6462500510397 1344.6451499358602 53.125 2 -0.430552368531923 0.11866943301248258 0.901210513818845 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.K78Gfs*54|1|0.19|ENSG00000134815|chr19:47353261-47353262|GA/-|frameshift_variant'] 27166 21646 FLLFC[Carbamidomethyl]MFSPHL True PC9_epitope_Rep5 1410.68283616333 1410.6817299358602 88.306 2 -0.43059810990863 0.11873341949527243 0.9012553915238104 ['ENST00000519380.1_1_8:74209332-74209419:+|nuORF'] 57633 10181 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 44.113 2 -0.43061147055027627 0.11873341949527243 0.9012684980765523 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 88960 21022 QVIDQYSI True PC9_epitope_Rep5 964.48656152216 964.48546993586 85.918 2 -0.43067796045686835 0.11876541110449791 0.9013337112411611 ['COL22A1|p.G705Efs*110|1|0.39|ENSG00000169436|chr8:138737549-138737549|C/-|frameshift_variant', 'COL22A1|p.P1042Qfs*65|1|0.27|ENSG00000169436|chr8:138676583-138676583|G/-|frameshift_variant', 'nc|ENSG00000169436|Q8NFW1-2|COL22A1', 'ENSG00000169436|ENST00000303045|COL22A1', 'nc|ENSG00000169436|Q8NFW1-3|COL22A1'] 26020 7719 FGGLGGGS True NCI_RA007_Epitope_Rep5 650.30238958094 650.30184496793 36.391 1 -0.43074525546571596 0.11879538150220212 0.9013996932049276 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 126379 19583 VLKFSLSNL True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 80.707 2 -0.43074922587689285 0.11879538150220212 0.9014035854894565 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|74|2|anti-sense'] 43588 7047 IGSVSFGTVYK True H1975_Epitope_Rep3 1156.61282466444 1156.61172993586 32.072 2 -0.43078084877118095 0.11880834566137836 0.9014345835148005 ['BRAF|p.G466V|5|0.23|ENSG00000157764|chr7:140781611-140781611|C/A|missense_variant'] 3291 17906 AGFGRRSYLV True PC9_epitope_Rep1 1124.60907669668 1124.6079699358602 73.667 2 -0.43079238314382867 0.11880834566137836 0.9014458888089708 ['ENSG00000205903|ENST00000382252|ZNF316'] 27533 10515 FNDGNAAVV True PC9_epitope_Rep2 905.4242956187699 905.42318993586 45.768 2 -0.43084401128830624 0.1188172682910241 0.9014964839852014 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 100069 19393 SIRRVYTRL True H1975_Epitope_Rep1 1162.69347502698 1162.69183490379 80.777 3 -0.43084795403087195 0.1188172682910241 0.901500347330161 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 97095 9851 SDGVAVLKV True PC9_epitope_Rep6 886.5123823471799 886.51128993586 48.37 2 -0.43087608786007847 0.1188172682910241 0.9015279124984207 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 3153 8694 AGDKHFLP True H1975_Epitope_Rep3 883.4552018242299 883.45410993586 38.441 2 -0.43089367830944364 0.1188172682910241 0.9015451455133904 ['ENST00000375206.6_1_9:100008408-100053768:+|nuORF', 'ENST00000375204.2_1_9:100008408-100054866:+|nuORF', 'ENST00000527128.5_1_9:100008408-100053855:+|nuORF'] 49758 9421 KGSSGSAF True H1975_Epitope_Rep1 739.35006804935 739.3495149679301 41.15 1 -0.43092271261867077 0.11883225082463358 0.901573586676149 ['ENSG00000205927|ENST00000382357|OLIG2'] 29570 3251 FVIFFFFFWYF True NCI_RA007_Epitope_Rep1 1608.7845814471596 1608.78237987172 16.538 4 -0.43097509082611213 0.11888123777947802 0.9016248848197059 ['ENST00000316423.10_1_4:39501678-39501759:-|nuORF'] 7050 8054 AQQPHIAGV True PC9_epitope_Rep5 919.4875645816699 919.48646993586 35.917 2 -0.4310327910589018 0.11891119914310488 0.901681380278538 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 48811 5786 KDREAFEA True NCI_RA007_Epitope_Rep3 964.4614094034798 964.46030993586 29.738 2 -0.4310381558729745 0.11891119914310488 0.9016866322768563 ['ENSG00000102096|ENST00000376509|PIM2', 'PIM2|p.V202Cfs*61|1|0.34|ENSG00000102096|chrX:48914563-48914563|C/-|frameshift_variant'] 91571 24013 RIKAITTC True NCI_RA007_Epitope_Rep3 904.5164221818001 904.51587496793 104.02 1 -0.4310579353434278 0.11892617906083172 0.9017059946316914 ['ENSG00000187105|ENST00000553558|HEATR4'] 142772 6887 YYRERSRERER True NCI_RA007_Epitope_Rep2 1598.80258453498 1598.80093490379 31.406 3 -0.4310859314131653 0.11894115846920213 0.9017333971442224 ['nc|ENSG00000111605|Q16630-3|CPSF6', 'ENSG00000111605|ENST00000435070|CPSF6', 'nc|ENSG00000111605|Q16630-2|CPSF6'] 111975 19909 TIQSVLLFP True PC9_epitope_Rep5 1016.5906326678798 1016.58952993586 81.634 2 -0.4311475929088895 0.1189731383883033 0.901793738207222 ['nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 122053 16519 VFWYNYLP True PC9_epitope_Rep1 1100.5331177917599 1100.53202993586 68.365 2 -0.4311952113047011 0.1189860936384346 0.9018403245101007 ['ENSG00000178467|ENST00000383729|P4HTM', 'nc|ENSG00000178467|Q9NXG6-3|P4HTM', 'ENST00000484115.5_1_3:49043466-49044337:+|nuORF', 'ENST00000472301.5_1_3:49043105-49044337:+|nuORF'] 101563 6461 SLLKLQQQ True PC9_epitope_Rep6 956.5654805492 956.56438993586 33.492 2 -0.4311992709466611 0.1189860936384346 0.9018442956620718 ['ENSG00000136367|ENST00000419474|ZFHX2'] 45059 12848 IPHSIPLEQ True PC9_epitope_Rep1 1032.56039516876 1032.55928993586 54.294 2 -0.43126429751957934 0.11901604787161703 0.9019078940817363 ['ENSG00000198690|ENST00000362065|FAN1', 'nc|ENSG00000198690|Q9Y2M0-2|FAN1'] 40147 10122 HQDKVIKI True PC9_epitope_Rep2 979.5814649665099 979.58036993586 44.273 2 -0.43128783193816417 0.11901604787161703 0.9019309066325982 ['MTTP|p.L743Yfs*5|1|0.15|ENSG00000138823|chr4:99618983-99618983|T/-|frameshift_variant', 'ENSG00000138823|ENST00000265517|MTTP', 'MTTP|p.A286Pfs*63|1|0.36|ENSG00000138823|chr4:99594829-99594829|G/-|frameshift_variant'] 100871 16716 SLERRHHS True PC9_epitope_Rep3 1020.52132432144 1020.52022993586 69.435 2 -0.4312900242972283 0.11902495410348814 0.9019330502415603 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 3615 14067 AGPEELGLQV True PC9_epitope_Rep6 1011.5236753068699 1011.52256993586 65.981 2 -0.4312922733133881 0.11902495410348814 0.9019352492237984 ['ENSG00000146700|ENST00000275560|SSC4D'] 100792 7695 SLEGKPPPP True H1975_Epitope_Rep1 920.4967322830398 920.49562993586 34.561 2 -0.43130463709938843 0.11902495410348814 0.9019473375186006 ['ENST00000485820.1_1_11:66052175-66053099:-|nuORF'] 44743 6742 ILYFSCNPP True H1975_Epitope_Rep3 1052.50010341132 1052.4990099358602 30.888 2 -0.43130644465490425 0.11902495410348814 0.9019491047364582 ['ENST00000393229.3_1_9:135117391-135118432:+|nuORF'] 3434 10306 AGKAPSNTSTL True PC9_epitope_Rep5 1045.5403880001702 1045.53928993586 44.63 2 -0.431321533282462 0.11903790583035866 0.9019638560315607 ['nc|ENSG998|Q9N2K0|HERV-H-ENH1'] 69458 10172 LVAAAVAA True H1975_Epitope_Rep3 684.41702541036 684.4164749679301 44.171 1 -0.4313315922095405 0.11903790583035866 0.9019736894657544 ['ENST00000465529.1_1_22:35695897-35713955:+|nuORF', 'ENST00000487670.1_1_22:35695897-35718132:+|nuORF'] 130517 24539 VSQIRLLRILL True H1975_Epitope_Rep3 1322.8761904162197 1322.8750899358602 102.12 2 -0.43135249270965476 0.11905288028420391 0.9019941198784399 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 65431 11882 LRGHRRRHR True NCI_RA007_Epitope_Rep5 1242.7394712163 1242.73783490379 52.359 3 -0.4314129783467455 0.11909375212454959 0.9020532332262401 ['ENST00000481474.5_1_6:28891330-28891657:-|nuORF'] 85136 8458 QELRDPTVP True H1975_Epitope_Rep2 1053.5454733806098 1053.54436993586 37.486 2 -0.43142485202601866 0.11909375212454959 0.902064835442591 ['nc|ENSG00000142794|Q9H094-3|NBPF3', 'ENSG00000142794|ENST00000318249|NBPF3'] 124946 9630 VHSPAGMAL True PC9_epitope_Rep4 881.4429228883699 881.44182993586 44.665 2 -0.43149008325998567 0.11909375212454959 0.9021285631453797 ['ENSG00000136867|ENST00000259392|SLC31A2'] 30553 15215 GAGVLTYI True NCI_RA007_Epitope_Rep2 792.43815477776 792.43760496793 63.876 1 -0.4315101220178078 0.11909375212454959 0.9021481358802952 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 15611 7576 EARSRFRSP True H1975_Epitope_Rep2 1104.57883919756 1104.57774993586 34.093 2 -0.4315268704741189 0.11909375212454959 0.9021644933358587 ['ENST00000463518.5_3_3:160939127-160939241:+|nuORF'] 127969 11423 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 48.938 2 -0.43154358003787957 0.1191087241021806 0.902180811446776 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 81956 12562 PLTGRRWKI True PC9_epitope_Rep4 1125.67709668685 1125.67546490379 56.145 3 -0.4316407925194992 0.11917265759105355 0.9022757195353365 ['nc|ENSG00000171495|Q7Z745-2|MROH2B', 'ENSG00000171495|ENST00000399564|MROH2B'] 32191 17049 GEVVLITTT True PC9_epitope_Rep5 931.5226126777101 931.52150993586 70.597 2 -0.4316638220494513 0.11917265759105355 0.9022981963863232 ['CDHR5|p.T418I|1|0.16|ENSG00000099834|chr11:619514-619514|G/A|missense_variant'] 92320 9582 RLLWVFRRRWR True NCI_RA007_Epitope_Rep4 1642.9797014816597 1642.97860993586 43.696 2 -0.43174480918101366 0.11918762746431 0.9023772192553173 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 57190 16452 LDVKEHINI True PC9_epitope_Rep2 1079.5975089534702 1079.59640993586 68.523 2 -0.43181004877138424 0.11921756568437511 0.9024408530347919 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525284.5_1_15:101565016-101602660:+|nuORF'] 114005 6895 TPAPPGPAT True PC9_epitope_Rep3 807.41266830591 807.41156993586 31.536 2 -0.4318102485406841 0.11921756568437511 0.902441047854682 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 10811 7932 CSKRREENFR True NCI_RA007_Epitope_Rep2 1323.6466014875498 1323.6455099358602 35.486 2 -0.4318410265526934 0.11924952840609758 0.9024710609638307 ['ENST00000564814.1_1_16:58426144-58426288:+|nuORF'] 138017 12421 YFWRIAWRFWR True NCI_RA007_Epitope_Rep1 1685.8731707244497 1685.87206993586 52.289 2 -0.43189545960125764 0.11926044251096081 0.9025241297375325 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 63584 8045 LMFFNTKFFGL True PC9_epitope_Rep5 1363.69986584703 1363.69822490379 35.883 3 -0.4319013770014156 0.11926044251096081 0.9025298979415396 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3'] 122781 13748 VGGPEIEVG True PC9_epitope_Rep4 855.4337976733099 855.43270993586 60.778 2 -0.43190339296911046 0.11926044251096081 0.9025318630406521 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 123211 7665 VGLERQVTVP True H1975_Epitope_Rep3 1096.62405805448 1096.62296993586 34.465 2 -0.4319830090043209 0.11928632115548003 0.9026094539635134 ['CON__Q3Y5Z3'] 47471 21056 IVPDLDLQQV True PC9_epitope_Rep5 1138.62338934814 1138.6222899358602 86.052 2 -0.4320054680478084 0.11928632115548003 0.9026313360228823 ['ENSG00000159256|ENST00000400485|MORC3'] 131658 12364 VTLTSLDI True PC9_epitope_Rep1 860.485498893 860.48440993586 52.417 2 -0.43201376410340003 0.11928632115548003 0.9026394183111418 ['ENSG00000175224|ENST00000683050|ATG13', 'nc|ENSG00000175224|O75143-4|ATG13', 'nc|ENSG00000175224|O75143-2|ATG13', 'nc|ENSG00000175224|O75143|ATG13', 'nc|ENSG00000175224|O75143-3|ATG13'] 122100 7491 VGAAWPRRG True H1975_Epitope_Rep3 968.5304324531598 968.52932993586 33.795 2 -0.4320183811928088 0.11928632115548003 0.9026439162813481 ['ENST00000307602.8_1_8:42752083-42752287:+|nuORF'] 132012 7331 VTSSEVWKR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 34.874 2 -0.4321031481309089 0.11930128629929823 0.9027264772860417 ['nc|ENSG00000185186|P59037|LINC00313'] 10932 11690 DAETSDLWR True H1975_Epitope_Rep1 1091.4883524273098 1091.48724993586 49.957 2 -0.43220421524287 0.11935023448650853 0.9028248670683401 ['LCE3E|p.G74Afs*45|1|0.13|ENSG00000185966|chr1:152565988-152565988|C/-|frameshift_variant'] 42379 7142 IEDADFGRQIS True H1975_Epitope_Rep3 1249.59388012501 1249.59278993586 32.444 2 -0.43225713015055195 0.11941617249757872 0.9028763596573937 ['CACNA2D1|p.N154D|1|0.61|ENSG00000153956|chr7:82117110-82117110|T/C|missense_variant'] 86425 3763 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 19.277 3 -0.43232430880184913 0.11946511706935807 0.9029417121392721 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 128118 18592 VPLLGGLL True H1975_Epitope_Rep1 780.5109257952 780.51037496793 77.527 1 -0.43242535220622164 0.11948007815818537 0.9030399655411233 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant', 'HERC2|p.A1157G|1|0.12|ENSG00000128731|chr15:28245988-28245988|G/C|missense_variant'] 127983 9013 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 44.7 2 -0.4324470890688388 0.11949503873861628 0.9030610953911197 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 60368 15606 LGSWVSSDGT True PC9_epitope_Rep2 1007.45598966987 1007.45488993586 65.307 2 -0.43246555760373573 0.11950593791943458 0.90307904628181 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 67608 12038 LSVLEMILP True H1975_Epitope_Rep1 1013.5831047592899 1013.58200993586 51.315 2 -0.43255426352627546 0.11950593791943458 0.9031652415163304 ['ENST00000359195.3_1_7:106505947-106508023:+|nuORF'] 8419 7574 ATLWLREHNR True NCI_RA007_Epitope_Rep1 1294.6894522756998 1294.68834993586 33.455 2 -0.4325737360149133 0.11950593791943458 0.9031841574467343 ['nc|ENSG00000095303|P23219-4|PTGS1', 'nc|ENSG00000095303|P23219-3|PTGS1', 'nc|ENSG00000095303|P23219-2|PTGS1', 'ENSG00000095303|ENST00000362012|PTGS1', 'nc|ENSG00000095303|P23219-6|PTGS1', 'nc|ENSG00000095303|P23219-5|PTGS1'] 29482 16627 FVFDRPLPVSR True PC9_epitope_Rep5 1331.73500548579 1331.73334490379 68.962 3 -0.4326423249984058 0.11955284483783829 0.9032507704488316 ['ENST00000526443.5_1_11:14535901-14541492:-|nuORF', 'ENST00000528307.5_1_11:14535901-14541893:-|nuORF', 'ENSG00000129084|ENST00000396394|PSMA1', 'nc|ENSG00000129084|P25786-2|PSMA1'] 12683 10500 DLDRVSAVAL True PC9_epitope_Rep2 1057.57677350889 1057.57566993586 45.71 2 -0.4326518918548833 0.11955284483783829 0.9032600597606613 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 132676 18624 VVGLQEALA True PC9_epitope_Rep1 898.5123823471799 898.51128993586 76.425 2 -0.4327977294385425 0.11957869701860188 0.9034016076175647 ['ENST00000588974.1_1_19:34839831-34843857:+|nuORF'] 142020 5570 YVLEQQRI True NCI_RA007_Epitope_Rep3 1047.5712942056298 1047.57018993586 28.902 2 -0.43285611821346703 0.11957869701860188 0.9034582478548179 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000162825|P0DPF2|NBPF20'] 949 10405 ADSAGLLPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43833496793 46.875 1 -0.4328853179728543 0.11957869701860188 0.9034865664975713 ['ENST00000368324.4_1_1:155854169-155854304:+|nuORF'] 108828 16814 SYVQSVSI True PC9_epitope_Rep5 881.4494477374499 881.4488949679301 69.682 1 -0.4329125891785058 0.11957869701860188 0.9035130107489476 ['nc|ENSG00000293504|Q99463|NPY6R'] 35478 4698 GSLFASSHPP True H1975_Epitope_Rep1 998.48214484806 998.48104993586 23.111 2 -0.4329597210942739 0.11958959026975606 0.9035587042718976 ['ENST00000471144.1_1_20:47852594-47852858:+|nuORF'] 140616 21547 YRRNFNYRRRR True NCI_RA007_Epitope_Rep1 1655.8981566856698 1655.8970499358602 88.159 2 -0.4329766157604135 0.11958959026975606 0.9035750804992335 ['ENSG00000065978|ENST00000321358|YBX1'] 45945 14540 ISELSGKVL True PC9_epitope_Rep1 944.5542471591599 944.55314993586 60.752 2 -0.43298872322241294 0.11958959026975606 0.9035868155023506 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-2|MTCL1'] 478 5533 AAMETFSI True NCI_RA007_Epitope_Rep4 868.40005501688 868.39894993586 27.877 2 -0.43300782244781894 0.11960454568618457 0.9036053256156328 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD'] 123300 18402 VGLNLSSL True PC9_epitope_Rep1 801.4596184983301 801.4590749679301 75.573 1 -0.43303749619629833 0.11963445499481919 0.9036340802738407 ['ENSG00000213171|ENST00000368820|LINGO4'] 44907 15612 INNYQELAL True PC9_epitope_Rep4 1076.5502244078798 1076.54912993586 67.975 2 -0.43303848185102 0.11963445499481919 0.9036350353201205 ['ENST00000591831.5_1_17:73841979-73842808:-|nuORF', 'ENST00000254806.7_2_17:73842232-73842808:-|nuORF'] 63392 13311 LLVGNKSI True PC9_epitope_Rep1 842.52255310806 842.52144993586 56.063 2 -0.43322426173990813 0.1197452229299363 0.9038149543784689 ['nc|ENSG00000117322|P20023-4|CR2', 'ENSG00000117322|ENST00000367057|CR2'] 17331 14635 EHAPSIIFM-[Oxidation] True PC9_epitope_Rep4 1059.5059174481898 1059.50480993586 64.224 2 -0.43328588373535826 0.1197452229299363 0.9038745919785991 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 37011 9690 GVNWPGSPP True H1975_Epitope_Rep2 909.4344663796498 909.43336993586 42.254 2 -0.4332957398733951 0.1197452229299363 0.9038841288492628 ['ENST00000339007.3_1_19:18507945-18508071:-|nuORF'] 70945 17322 LYGKIAEAF True PC9_epitope_Rep5 1010.5436824754598 1010.54258993586 71.628 2 -0.43330387951540467 0.1197452229299363 0.9038920044360773 ['ENSG00000123159|ENST00000393033|GIPC1', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 96556 11692 SAELASFL True NCI_RA007_Epitope_Rep3 836.42798401688 836.42688993586 53.105 2 -0.43343400140343313 0.11977715877437325 0.9040178571129497 ['ENSG00000169299|ENST00000381967|PGM2'] 32858 13961 GHQFGVTW True PC9_epitope_Rep3 930.4348007328199 930.43370993586 58.776 2 -0.4334504893662123 0.11981997282608696 0.9040337976578997 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000484203.5_1_2:86348636-86354493:+|nuORF', 'ENST00000480102.1_1_2:86348636-86354336:+|nuORF'] 120748 12699 VEKRENLET True PC9_epitope_Rep3 1116.5775017848798 1116.57640993586 53.87 2 -0.43345940391726956 0.11981997282608696 0.9040424156301219 ['ENST00000370713.5_1_1:82266156-82302585:+|nuORF'] 121569 15041 VFDYEAAG True PC9_epitope_Rep4 870.3759484440199 870.3753949679301 65.787 1 -0.4334683879675149 0.11981997282608696 0.9040511003586388 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant'] 93824 24553 RRATVLVLVV True H1975_Epitope_Rep1 1124.7393625902398 1124.7382699358602 101.75 2 -0.4334995707944283 0.11981997282608696 0.9040812409097685 ['nc|ENSG00000168398|P30411-2|BDKRB2', 'ENSG00000168398|ENST00000554311|BDKRB2'] 113812 15859 TNDGGFPGSI True PC9_epitope_Rep2 963.42977492203 963.42866993586 66.26 2 -0.433547739970151 0.11984986922998539 0.9041277897898884 ['ENST00000604238.2_1_10:74322776-74385791:-|nuORF'] 102485 9142 SLVGEPVMYP True PC9_epitope_Rep6 1090.53688284286 1090.53578993586 45.273 2 -0.43357150467146605 0.11984986922998539 0.9041507505103032 ['TYW1B|p.I425V|1|0.31|ENSG00000277149|chr7:72713718-72713718|T/C|missense_variant'] 331 7829 AAIEKRMAEK True PC9_epitope_Rep1 1145.62267815549 1145.6210249037902 34.941 3 -0.43361655348216815 0.1198797636030161 0.9041942669377171 ['SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'ENST00000491944.1_1_3:38656036-38674834:-|nuORF'] 129100 11898 VQPWLEHLP True PC9_epitope_Rep1 1117.59202965021 1117.59092993586 50.632 2 -0.43367924350547005 0.1198797636030161 0.9042548062864961 ['ENST00000515194.5_1_4:2938769-2938895:+|nuORF'] 108003 10532 SWQRYWLP True NCI_RA007_Epitope_Rep3 1134.5610638750998 1134.5599699358602 48.483 2 -0.4337851772841899 0.11996060184084502 0.9043570575645868 ['ENST00000399151.3_1_21:37642452-37650333:+|nuORF'] 103566 11557 SPSLSPLAA True H1975_Epitope_Rep2 841.4545331178899 841.45342993586 49.515 2 -0.4337947798908574 0.11996060184084502 0.9043663233568544 ['ENSG00000166341|ENST00000299441|DCHS1'] 103134 19007 SPHRILLGRA True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 78.075 2 -0.4338447643544772 0.1199755463854501 0.904414546513359 ['ENST00000560415.1_2_15:40617466-40617688:+|nuORF'] 66604 12324 LSIVPMRRGYW True H1975_Epitope_Rep1 1376.73871096724 1376.73760993586 52.431 2 -0.43389561089121287 0.12002445319929357 0.9044635874264564 ['ENST00000469997.1_1_16:69068020-69068488:+|nuORF'] 65765 6149 LSDDWRQRQPM True H1975_Epitope_Rep1 1430.67248188222 1430.6713899358601 28.722 2 -0.43399377832321734 0.12005637725211839 0.9045582289365163 ['ENSG00000185792|ENST00000332836|NLRP9', 'nc|ENSG00000185792|Q7RTR0-2|NLRP9', 'NLRP9|p.N388Kfs*34|1|0.88|ENSG00000185792|chr19:55732666-55732667|TG/-|frameshift_variant'] 46178 12394 ISLRGEGTL True PC9_epitope_Rep5 944.5290950404799 944.52798993586 52.67 2 -0.4340986626703457 0.12008830022075055 0.9046592878664038 ['ENSG00000102313|ENST00000218436|ITIH6'] 44575 19422 ILPLLGHGV True PC9_epitope_Rep5 917.5698376536499 917.56874993586 79.755 2 -0.43423045270016253 0.12017116367526447 0.9047861854918111 ['ENSG00000084463|ENST00000261167|WBP11', 'WBP11|p.S181C|1|0.09|ENSG00000084463|chr12:14794716-14794716|G/C|missense_variant'] 20201 12179 ENIQDILAQNL True NCI_RA007_Epitope_Rep1 1269.6564803815697 1269.65538993586 51.34 2 -0.4342465469557843 0.12019900159608789 0.9048016757272079 ['nc|ENSG00000154258|Q8IUA7-4|ABCA9', 'nc|ENSG00000154258|Q8IUA7-3|ABCA9', 'ABCA9|p.G1473Afs*4|1|0.35|ENSG00000154258|chr17:68984137-68984137|C/-|frameshift_variant', 'ENSG00000154258|ENST00000340001|ABCA9'] 58459 8357 LEPQQPEAP True H1975_Epitope_Rep2 1007.4923751785898 1007.49126993586 37.097 2 -0.4342762069931541 0.12019900159608789 0.9048302188707344 ['ENSG00000219607|ENST00000405617|PPP1R3G'] 72013 6586 METAAAVAA True NCI_RA007_Epitope_Rep4 833.3953039896098 833.39475496793 31.959 1 -0.43432434387135765 0.12019900159608789 0.9048765327279857 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 117626 15235 TVTGVSLSIV True PC9_epitope_Rep1 974.56481184286 974.56370993586 63.421 2 -0.43436454434689714 0.12021394006282367 0.9049152009142235 ['ENST00000396267.1_2_17:8272399-8272447:-|nuORF'] 49645 13451 KGIATLAVVL True PC9_epitope_Rep1 983.6379172134699 983.63682993586 56.598 2 -0.4343987882355128 0.12029475185493319 0.9049481324865898 ['ENSG00000181773|ENST00000374024|GPR3'] 50029 4008 KKAYYLTQKIP True H1975_Epitope_Rep3 1351.7863723523096 1351.78471490379 20.542 3 -0.43444719588055475 0.12029475185493319 0.904994673910523 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219612840-219617731:+|nuORF'] 101990 22057 SLQNLILAL True PC9_epitope_Rep3 983.6015317047498 983.60042993586 90.139 2 -0.4345524476944323 0.12033547247971206 0.9050958230106123 ['ENST00000376055.8_1_20:30310076-30310447:-|nuORF', 'ENST00000376062.6_1_20:30310076-30310181:-|nuORF', 'ENST00000420488.5_1_20:30310076-30311747:-|nuORF', 'ENST00000456404.5_1_20:30310076-30311747:-|nuORF'] 110408 7936 TEVTWIDGGP True H1975_Epitope_Rep1 1073.5029398622898 1073.50184993586 35.475 2 -0.43455610531053235 0.12033547247971206 0.9050993369417195 ['ENSG00000257743|ENST00000477922|MGAM2'] 100001 8700 SIPTNEKADP True H1975_Epitope_Rep2 1070.52440358286 1070.5233099358602 38.427 2 -0.4346030728197351 0.12033547247971206 0.9051444527439452 ['nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'nc|ENSG00000172403|Q9UMS6|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-3|SYNPO2'] 78788 5597 PAAPPLLP True NCI_RA007_Epitope_Rep1 774.46397560278 774.46286993586 25.835 2 -0.43460512935276024 0.12033547247971206 0.9051464279156209 ['ENST00000521334.5_3_14:91526698-91626657:+|nuORF'] 82095 11702 PMQPVTAP True PC9_epitope_Rep1 839.4211248146299 839.4205749679301 49.887 1 -0.43462715833235416 0.12033547247971206 0.9051675838910389 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1'] 39700 7032 HLSPASSQV True PC9_epitope_Rep5 924.46649478392 924.46538993586 32.017 2 -0.4346984470515834 0.12038436072865559 0.9052360288079785 ['ENST00000474945.1_1_3:52740888-52741806:+|nuORF'] 66995 19985 LSPKTTISV True PC9_epitope_Rep1 944.55424715916 944.55314993586 81.697 2 -0.43477033674716187 0.12039929376612794 0.9053050218208436 ['ENST00000474985.5_1_2:33809845-33813599:-|nuORF', 'ENSG00000119812|ENST00000238823|FAM98A'] 16023 19941 EDTLYQGLP True PC9_epitope_Rep3 1034.49204082542 1034.49147496793 81.947 1 -0.43479533407778853 0.12040809397704896 0.9053290051072912 ['ENSG00000171017|ENST00000306708|LRRC8E'] 2945 5474 AFDAGERP True NCI_RA007_Epitope_Rep1 861.39808087093 861.39698993586 25.363 2 -0.4348056831258246 0.12040809397704896 0.9053389333039943 ['nc|ENSG00000163219|P42331-5|ARHGAP25', 'nc|ENSG00000163219|P42331-3|ARHGAP25', 'nc|ENSG00000163219|P42331-6|ARHGAP25', 'nc|ENSG00000163219|P42331|ARHGAP25', 'ENSG00000163219|ENST00000409202|ARHGAP25', 'ENST00000488795.1_1_2:69034406-69043495:+|nuORF', 'ENST00000473986.1_1_2:69009370-69040541:+|nuORF', 'nc|ENSG00000163219|P42331-2|ARHGAP25'] 135490 25620 WIMLRRLYI True PC9_epitope_Rep1 1262.73216903482 1262.7310699358602 103.57 2 -0.4348120230063373 0.12040809397704896 0.9053450150704817 ['ENST00000590392.5_1_19:37203312-37203378:+|nuORF'] 126020 17710 VLDSVDVRL True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 72.917 2 -0.4348148285498965 0.12040809397704896 0.9053477063202641 ['ENSG00000169105|ENST00000306243|CHST14'] 26687 7073 FITVDGRE True H1975_Epitope_Rep3 935.4712458111899 935.47014993586 32.173 2 -0.43482019701187785 0.12042098115769818 0.9053528559551126 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000492048.5_1_18:6942080-6955548:-|nuORF'] 70243 10193 LVREGEIAM True PC9_epitope_Rep5 1016.5324661687598 1016.53136993586 44.195 2 -0.43489070328155977 0.12042098115769818 0.9054204731717747 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3'] 81667 20968 PLLPMEQLI True PC9_epitope_Rep6 1052.59400379616 1052.59290993586 93.447 2 -0.4349003771707638 0.12043591179915465 0.9054297484730157 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant'] 59619 21674 LFYFQCIEYI True PC9_epitope_Rep3 1337.63659688413 1337.63548993586 88.668 2 -0.4349322793456298 0.12045084193373166 0.9054603324459786 ['nc|ENSG00000179119|Q68D10-3|SPTY2D1'] 18668 14363 ELADYNNVIY True H1975_Epitope_Rep3 1212.56626839484 1212.56516993586 60.598 2 -0.43496433220855224 0.12045963744992871 0.9054910550732601 ['ENSG00000175065|ENST00000308128|DSG4', 'nc|ENSG00000175065|Q86SJ6-2|DSG4'] 132581 6750 VVEQMNKYKAR True NCI_RA007_Epitope_Rep5 1364.72345482592 1364.7223499358602 32.639 2 -0.43497098373076354 0.12045963744992871 0.9054974298186714 ['nc|ENSG00000066933|B2RTY4-2|MYO9A', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A'] 20475 19696 EPIPYEFMA True PC9_epitope_Rep6 1095.49468367771 1095.4935899358602 88.417 2 -0.43497335173452706 0.12045963744992871 0.9054996992267309 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 118473 20710 TYPNTYIF True PC9_epitope_Rep2 1017.48074786573 1017.4801749679301 85.097 1 -0.4350236210110611 0.12045963744992871 0.9055478679480247 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 121132 15355 VERRRRRGP True H1975_Epitope_Rep2 1180.7013543720798 1180.70024993586 64.221 2 -0.43513502292156103 0.12050851197447256 0.9056545635778394 ['ENST00000230859.7_2_5:6713753-6713927:+|nuORF'] 34627 19631 GPWTNQLL True PC9_epitope_Rep3 927.48141657207 927.48030993586 80.749 2 -0.4351733698013266 0.1205383662316061 0.9056912740815792 ['ENSG00000179761|ENST00000323372|PIPOX', 'ENST00000580241.5_1_17:27280417-27383320:+|nuORF', 'ENST00000583215.5_1_17:27338116-27383320:+|nuORF'] 127960 11176 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 47.874 2 -0.43518886483971025 0.1205383662316061 0.9057061055164359 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 120199 9760 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.4958449679301 42.531 1 -0.4353443108897397 0.120600115406809 0.9058548181804756 ['ENSG00000162231|ENST00000294172|NXF1'] 18603 14669 EKRRKKRKEWV True PC9_epitope_Rep4 1541.9266628492899 1541.9250149037903 64.359 3 -0.43537529257903546 0.120600115406809 0.9058844412626692 ['nc|ENSG00000170264|Q3B820-2|FAM161A', 'nc|ENSG00000170264|Q3B820|FAM161A', 'ENSG00000170264|ENST00000404929|FAM161A'] 98678 15628 SGEDAFVF True PC9_epitope_Rep2 870.37594844402 870.37484993586 65.39 2 -0.43538195154237963 0.120600115406809 0.9058908074960512 ['DCAF8L1|p.V310F|1|0.35|ENSG00000226372|chrX:27980407-27980407|C/A|missense_variant'] 61042 15073 LIFLFWMP True H1975_Epitope_Rep2 1065.5721461527698 1065.5710499358602 63.128 2 -0.43550020403217243 0.12066595387200245 0.9060038189710463 ['NALCN|p.C970F|1|0.26|ENSG00000102452|chr13:101103320-101103320|C/A|missense_variant'] 338 7126 AAIKGNQESVK True NCI_RA007_Epitope_Rep3 1143.62478633047 1143.62368993586 35.152 2 -0.43551229014951115 0.12068087706197814 0.9060153648742523 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 78975 21217 PAISELIQSV True PC9_epitope_Rep5 1055.58627556343 1055.5851699358602 86.659 2 -0.43558938768989247 0.12071072192241115 0.9060889964662914 ['nc|ENSG00000147642|Q9NX95-5|SYBU', 'nc|ENSG00000147642|Q9NX95-2|SYBU', 'nc|ENSG00000147642|Q9NX95-4|SYBU', 'nc|ENSG00000147642|Q9NX95-3|SYBU', 'ENSG00000147642|ENST00000276646|SYBU'] 75322 11826 NINHGSFIYL True PC9_epitope_Rep1 1176.5927579262 1176.59110490379 50.354 3 -0.4356082120230055 0.12071072192241115 0.9061069693082305 ['ENSG00000204740|ENST00000454679|MALRD1'] 14682 13444 DVIEEYFK True NCI_RA007_Epitope_Rep2 1041.50187723313 1041.5007899358602 56.937 2 -0.4357090576596089 0.12072154626754229 0.9062032182594696 ['ENSG00000112306|ENST00000230050|RPS12'] 45268 18561 IPVLYPESA True PC9_epitope_Rep5 987.52769805815 987.52660993586 76.42 2 -0.4357183147247211 0.12072154626754229 0.9062120504072279 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1'] 41363 19492 HWVVTEDGKI True PC9_epitope_Rep1 1182.6033226098998 1182.6022299358601 79.794 2 -0.4357456258040427 0.12072154626754229 0.9062381049422521 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant'] 56592 21279 LDHIVTYLF True PC9_epitope_Rep3 1119.5964463243101 1119.5953499358602 87.145 2 -0.43580162720032223 0.12074728929462271 0.9062915161721071 ['ENSG00000130227|ENST00000252512|XPO7'] 92321 12448 RLLWVFRRRWR True PC9_epitope_Rep6 1642.9797014816597 1642.97860993586 59.309 2 -0.43581159128122904 0.12074728929462271 0.906301017475084 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 43091 14762 IEVWKHKN True PC9_epitope_Rep5 1052.5767139392399 1052.57560993586 61.781 2 -0.43581986726486854 0.12074728929462271 0.9063089086422335 ['ENST00000557005.1_1_14:64490935-64514966:+|nuORF'] 56344 4768 LDDENDSLRY True NCI_RA007_Epitope_Rep2 1238.54151019898 1238.54040993586 23.178 2 -0.435824652975816 0.12074728929462271 0.9063134716443955 ['ENSG00000134042|ENST00000398439|MRO', 'nc|ENSG00000134042|Q9BYG7-5|MRO'] 112025 10637 TISDLTTSL True PC9_epitope_Rep6 949.4967918526901 949.49568993586 51.731 2 -0.43586406710429115 0.1207961448399905 0.9063510464883991 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158'] 140128 14568 YQQQQSLAL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 61.306 2 -0.43591725330210335 0.12080491363806034 0.9064017362823251 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 11148 12776 DDGLFSGD True NCI_RA007_Epitope_Rep1 824.31882749072 824.31827496793 53.683 1 -0.43597618372534847 0.12080491363806034 0.9064578812814079 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 50032 10742 KKCYRKQEQWW True PC9_epitope_Rep1 1581.78745206481 1581.78580490379 46.206 3 -0.43599291838499465 0.12080491363806034 0.9064738212309938 ['ENSG00000175699|ENST00000636493|CCDC197'] 113049 14608 TLNLLLYND True PC9_epitope_Rep3 1077.5706254992901 1077.5695299358601 61.321 2 -0.4360112227138279 0.12080491363806034 0.9064912544194156 ['ENSG00000170044|ENST00000466937|ZPLD1', 'nc|ENSG00000170044|Q8TCW7-2|ZPLD1'] 59714 5083 LGCCSVLCSDK True NCI_RA007_Epitope_Rep5 1126.48208747202 1126.48045490379 26.251 3 -0.43602714186100416 0.12080958197611293 0.9065064143366535 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 58247 14682 LELMQKHIHS True PC9_epitope_Rep1 1234.6492272565001 1234.6481299358602 61.296 2 -0.4360719653645707 0.12080958197611293 0.9065490920487688 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant'] 116105 5190 TSRRFLQGP True NCI_RA007_Epitope_Rep5 1060.5777765683997 1060.57666993586 26.659 2 -0.43609423075412057 0.12080958197611293 0.9065702871396033 ['ENST00000289753.1_1_1:19991838-19992072:+|nuORF'] 108109 18307 SYDFRLDAI True PC9_epitope_Rep6 1098.53457434374 1098.53346993586 83.061 2 -0.4361129444594678 0.12080958197611293 0.9065880990097767 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 56479 11271 LDERNRLLGEY True H1975_Epitope_Rep2 1376.7048275563197 1376.70372993586 48.399 2 -0.4361136769756935 0.12080958197611293 0.9065887961830807 ['ENST00000526500.5_1_11:111859671-111889757:+|nuORF', 'nc|ENSG00000150764|Q155Q3-2|DIXDC1', 'ENSG00000150764|ENST00000440460|DIXDC1'] 119963 9334 VDNQRSRLP True NCI_RA007_Epitope_Rep1 1083.57850484439 1083.57740993586 40.301 2 -0.43613127534182083 0.12080958197611293 0.9066055444975626 ['ENSG00000275395|ENST00000616721|FCGBP', 'nc|ENSG00000275395|Q9Y6R7|FCGBP', 'FCGBP|p.A1971Tfs*9|1|0.06|ENSG00000275395|chr19:39893456-39893457|CA/-|frameshift_variant', 'FCGBP|p.G2617Afs*69|1|0.11|ENSG00000275395|chr19:39886329-39886329|C/-|frameshift_variant'] 4338 2710 AIKCNQKNYKK True NCI_RA007_Epitope_Rep2 1336.7285402063596 1336.72690490379 14.769 3 -0.43616741711858764 0.12083531247879487 0.9066399347740729 ['L1MDa_dup2979|chr7:144182489-144183245:+|1.2545692982052257|0.1455468842828891|3.11|536.0|3|1|sense'] 33377 8546 GLAAERGQVL True NCI_RA007_Epitope_Rep4 1012.5665431783599 1012.56544993586 39.666 2 -0.4361734357430732 0.12083531247879487 0.9066456609728394 ['ENST00000240101.2_1_8:29205656-29205974:-|nuORF'] 35686 11476 GTELPPVSP True H1975_Epitope_Rep1 895.46509780159 895.46400993586 49.125 2 -0.4362672225916084 0.12083531247879487 0.9067348632494024 ['ENST00000537045.5_1_22:19025468-19025981:-|nuORF'] 47176 14592 ITYERKIQI True PC9_epitope_Rep1 1162.6710082468999 1162.66936490379 60.952 3 -0.4363036877512398 0.12083531247879487 0.9067695317735314 ['ENST00000335154.9_1_12:50032767-50032947:-|nuORF'] 131384 8467 VTHEQGTVL True PC9_epitope_Rep4 982.5083595959 982.50726993586 40.038 2 -0.43636924780229686 0.12086513994910941 0.9068318417649233 ['ENSG00000108830|ENST00000587250|RND2'] 127982 8939 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 44.364 2 -0.4363771881606116 0.12086513994910941 0.9068393867491961 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 5785 6389 APDEKYVAA True PC9_epitope_Rep5 962.4709114580199 962.46980993586 29.552 2 -0.43642586231210473 0.12091192834848691 0.9068856290403169 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 22575 9287 ETKSITLFP True H1975_Epitope_Rep2 1034.5648118428599 1034.56370993586 40.68 2 -0.4364367228055939 0.12091192834848691 0.9068959449887807 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant', 'RYR2|p.N3207Kfs*49|1|0.52|ENSG00000198626|chr1:237706985-237706986|-/T|frameshift_variant', 'RYR2|p.K1840Sfs*6|1|0.05|ENSG00000198626|chr1:237614645-237614645|G/-|frameshift_variant', 'RYR2|p.A2213Lfs*22|1|0.25|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant'] 68545 10242 LTGLNFTFCSP True NCI_RA007_Epitope_Rep2 1198.5692456003 1198.5681499358602 44.432 2 -0.4364728818425488 0.12094175119584762 0.9069302859247234 ['ENST00000533996.5_1_17:70072759-70080101:-|nuORF', 'ENST00000434703.5_1_17:70072759-70080101:-|nuORF'] 108336 11235 SYLDKVQAL True NCI_RA007_Epitope_Rep5 1035.5600608155898 1035.5589699358602 49.855 2 -0.43647405305097325 0.12094175119584762 0.9069313981130924 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 117456 6743 TVQRIAAELK True PC9_epitope_Rep5 1127.6662572196299 1127.6646149037902 30.907 3 -0.43649156391205285 0.12095666186074125 0.9069480255790252 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'chr2:142960770-142964653|247|13.82|0.57|4.59|+|ENST00000621320|KYNU,KYNU'] 83861 10227 PVNTAQGNLKI True PC9_epitope_Rep5 1153.64552177505 1153.64386490379 44.327 3 -0.4365736664762327 0.12102245742587693 0.9070259616686867 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 47456 7703 IVNLIRNARL True NCI_RA007_Epitope_Rep2 1180.7404252193999 1180.73932993586 34.588 2 -0.4366318899002599 0.12103531327385597 0.907081205866389 ['ENSG00000104408|ENST00000220849|EIF3E'] 22612 7664 ETLQTVTIY True H1975_Epitope_Rep3 1066.55464108198 1066.55354993586 34.461 2 -0.4366344289290797 0.12103531327385597 0.9070836145116244 ['ENSG00000090339|ENST00000264832|ICAM1'] 40879 5485 HSFSSATEI True NCI_RA007_Epitope_Rep2 977.44542498617 977.44432993586 25.953 2 -0.43673410397772655 0.1210502213402534 0.9071781403480093 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 83265 8140 PTAEGLAAA True PC9_epitope_Rep6 799.4075829254699 799.40648993586 40.854 2 -0.436912016562222 0.1211288626573047 0.9073467125524295 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 9880 23172 AYLIGSIGV True PC9_epitope_Rep1 891.50656869075 891.5060249679301 93.925 1 -0.4369501882428446 0.1211288626573047 0.9073828551795813 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'ENST00000552300.1_1_12:78574665-78583766:+|nuORF'] 102072 6214 SLRDQYHLI True NCI_RA007_Epitope_Rep3 1143.60365696307 1143.6020249037902 31.45 3 -0.43697347507942486 0.1211288626573047 0.9074048998233313 ['ENSG00000231274|ENST00000612221|SBK3'] 121211 5693 VESRPDDP True H1975_Epitope_Rep2 913.4141248578899 913.41302993586 26.897 2 -0.43698442828204986 0.12114376812577379 0.9074152676048454 ['ENST00000424148.1_1_11:1594063-1594210:+|nuORF'] 124401 21664 VGVDEEIVYAK True NCI_RA007_Epitope_Rep2 1220.6288686513997 1220.6277699358602 89.748 2 -0.43714164352416846 0.12120544042329479 0.9075639993354248 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.S138Kfs*9|1|0.03|ENSG00000092201|chr14:21370403-21370406|TTGC/-|frameshift_variant', 'SUPT16H|p.D140Vfs*9|1|0.04|ENSG00000092201|chr14:21370400-21370401|-/CA|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 79901 11751 PEPLRSLVP True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 50.073 2 -0.4372028381825732 0.12120544042329479 0.9076218509302326 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2', 'ENST00000580027.1_1_17:73559414-73559615:+|nuORF'] 16752 12764 EETFVYEVP True H1975_Epitope_Rep2 1111.5073565363898 1111.50624993586 54.2 2 -0.4372633098465453 0.12120544042329479 0.9076789964240451 ['MLEC|p.G110V|1|0.46|ENSG00000110917|chr12:120694184-120694184|G/T|missense_variant'] 32527 7864 GGGFADPRDAG True H1975_Epitope_Rep1 1018.4468219684999 1018.44572993586 35.202 2 -0.43728120737806264 0.12121623225762689 0.9076959052075549 ['ENST00000556029.5_2_12:98909542-98909698:+|nuORF'] 84194 21002 PYLDKFFAL True PC9_epitope_Rep4 1112.59063266788 1112.5895299358601 88.946 2 -0.4373059438131833 0.12121623225762689 0.9077192718307949 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 35503 19389 GSPCWGLL True PC9_epitope_Rep5 831.3949100667899 831.39380993586 79.625 2 -0.4373124345083567 0.12121623225762689 0.9077254024705927 ['ENST00000483944.5_1_3:124810369-124811009:-|nuORF'] 112950 23418 TLLLNRRS True PC9_epitope_Rep1 971.58761297611 971.58650993586 94.861 2 -0.43747413815786906 0.1212460361872785 0.9078780519838784 ['ENSG00000163673|ENST00000636136|DCLK3'] 62686 19971 LLLLLLLL True PC9_epitope_Rep2 922.68307650074 922.68196993586 82.218 2 -0.4374833771173853 0.1212460361872785 0.9078867687450988 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'SEMA6C|p.M8I|1|0.48|ENSG00000143434|chr1:151142598-151142598|C/G|missense_variant', 'EIF2AK3|p.E232Rfs*74|1|0.4|ENSG00000172071|chr2:88593345-88593345|C/-|frameshift_variant', 'ENSG00000184709|ENST00000371542|LRRC26', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'PCDHA8|p.W12G|1|0.22|ENSG00000204962|chr5:140841355-140841355|T/G|missense_variant', 'ENSG00000117899|ENST00000261758|MESD', 'ENSG00000182685|ENST00000328540|BRICD5', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000183971|ENST00000566435|NPW', 'ENSG00000070031|ENST00000176195|SCT', 'ENSG00000178473|ENST00000380433|UCN3', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'nc|ENSG00000117899|Q14696-2|MESD', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000121316|ENST00000240617|PLBD1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 75453 12507 NKDPILHVL True PC9_epitope_Rep4 1047.60767971435 1047.60658993586 55.925 2 -0.4375868532477694 0.12127583809539959 0.907984360048535 ['nc|ENSG00000130731|Q96S19-6|METTL26', 'ENSG00000130731|ENST00000301686|METTL26', 'nc|ENSG00000130731|Q96S19-4|METTL26', 'nc|ENSG00000130731|Q96S19-3|METTL26', 'nc|ENSG00000130731|Q96S19-5|METTL26', 'nc|ENSG00000130731|Q96S19-2|METTL26', 'ENST00000448973.6_1_16:685849-686290:-|nuORF'] 56100 16035 LATVEAAVQRL True PC9_epitope_Rep4 1169.6768219033297 1169.67572993586 69.609 2 -0.4375960710147875 0.12127583809539959 0.9079930503584963 ['ENSG00000137877|ENST00000320955|SPTBN5'] 107358 8799 SVLGTLLQK True NCI_RA007_Epitope_Rep3 957.58588164061 957.58478993586 41.699 2 -0.43763965912775243 0.12129073829145047 0.9080341371118174 ['ENSG00000130829|ENST00000342782|DUSP9'] 44382 17580 ILEVKQAKNP True PC9_epitope_Rep3 1138.6710082468996 1138.66990993586 72.809 2 -0.4377187427100563 0.12130563798219585 0.9081086521154249 ['ATP6AP2|p.A283V|1|0.19|ENSG00000182220|chrX:40600871-40600871|C/T|missense_variant'] 96782 6351 SAPTPAPAA True PC9_epitope_Rep5 781.39701824177 781.39592993586 29.405 2 -0.4377810540030181 0.12131848008545704 0.908167336203391 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 81430 14303 PLENHTAI True PC9_epitope_Rep3 893.46068112749 893.45958993586 60.103 2 -0.4377878955256921 0.12131848008545704 0.9081737779923563 ['ENSG00000185274|ENST00000333538|GALNT17'] 32518 11935 GGFGGFGG True PC9_epitope_Rep1 654.2761748330998 654.2756249679301 50.774 1 -0.4379370967919731 0.12135033402285599 0.9083141886995247 ['ENSG00000171403|ENST00000246662|KRT9'] 560 4244 AAQKGNYRFMK True NCI_RA007_Epitope_Rep4 1312.6710253302397 1312.66936490379 22.645 3 -0.4379618551860085 0.12136523169263637 0.9083374748436587 ['nc|ENSG00000119509|Q9Y283-2|INVS', 'INVS|p.R914Lfs*31|1|0.05|ENSG00000119509|chr9:100292997-100292998|-/TTGGT|frameshift_variant', 'ENSG00000119509|ENST00000262457|INVS'] 142021 6098 YVLEQQRI True NCI_RA007_Epitope_Rep4 1047.5712942056298 1047.57018993586 30.071 2 -0.43798107385696944 0.12139502551669182 0.9083555480181258 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000162825|P0DPF2|NBPF20'] 113099 20583 TLNTTYSFL True PC9_epitope_Rep5 1058.52842633414 1058.52732993586 84.22 2 -0.43799334373509374 0.12139502551669182 0.9083670853520709 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000504459.5_1_5:74009375-74016573:+|nuORF'] 136548 5404 WWFRWRLDRYV True NCI_RA007_Epitope_Rep5 1681.8629999635698 1681.8613649037902 27.475 3 -0.4380186352502919 0.12140580496405805 0.908390863898287 ['ENSG00000127995|ENST00000297273|CASD1'] 43611 14761 IGVEGGFY True H1975_Epitope_Rep2 840.40176926904 840.40122496793 61.937 1 -0.4380307981074308 0.12140580496405805 0.9084022977198722 ['USP5|p.D108Y|1|0.8|ENSG00000111667|chr12:6856034-6856034|G/T|missense_variant'] 114298 15198 TPQAYSSTL True PC9_epitope_Rep1 966.46582607758 966.46472993586 63.279 2 -0.4380342152925921 0.12140580496405805 0.9084055099124475 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 46585 6867 ITAPPGTAA True PC9_epitope_Rep6 797.42831837005 797.4272299358599 35.296 2 -0.43805907642004305 0.12142070017801136 0.9084288774301487 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 130048 17514 VSCEVIDWV True PC9_epitope_Rep4 1048.4899326504399 1048.4888299358602 75.371 2 -0.4381051300666563 0.12145254806225206 0.908472153927863 ['ENSG00000172497|ENST00000307624|ACOT12'] 114003 9279 TPAPHSPWTA True PC9_epitope_Rep6 1063.50869394907 1063.50758993586 45.848 2 -0.4381429272673194 0.12148233539024886 0.9085076618245715 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 20212 11048 ENKLLLQERV True H1975_Epitope_Rep1 1240.7139356880398 1240.71282993586 47.46 2 -0.43814349787518586 0.12148233539024886 0.9085081978024002 ['ENSG00000155816|ENST00000319653|FMN2', 'nc|ENSG00000155816|Q9NZ56-2|FMN2'] 358 7129 AAKDAEKIREL True NCI_RA007_Epitope_Rep3 1242.6932002434598 1242.6915449037901 35.163 3 -0.43816887958462125 0.1214972282968011 0.9085320370127199 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 33111 6666 GIRKQWHEDI True NCI_RA007_Epitope_Rep5 1280.6625688215197 1280.66092490379 32.309 3 -0.4382112459716847 0.12151212069842346 0.9085718195928048 ['ENSG00000100393|ENST00000263253|EP300'] 113504 10600 TLTEHYDI True PC9_epitope_Rep3 990.46582607758 990.46472993586 45.72 2 -0.43824036723439724 0.12152495253593708 0.9085991582140412 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 40292 14756 HQNDFKIEL True PC9_epitope_Rep3 1142.57202248162 1142.57038490379 61.897 3 -0.4382415511821672 0.12152495253593708 0.908600269572981 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 13338 13838 DLVKVSEILK True PC9_epitope_Rep4 1142.69107498514 1142.68942490379 61.127 3 -0.4382670285438515 0.1215567948739681 0.90862418273402 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant'] 63380 21420 LLVELTRKLTY True PC9_epitope_Rep5 1347.81258710015 1347.8114899358602 87.456 2 -0.4383055017030465 0.12157168525612774 0.9086602859687426 ['HELQ|p.K1000R|1|0.48|ENSG00000163312|chr4:83418157-83418157|T/C|missense_variant'] 64085 10710 LPDAKAKSPP True H1975_Epitope_Rep3 1022.5760452328999 1022.57494993586 46.273 2 -0.4383313967341481 0.12160146450606821 0.9086845805658089 ['ENSG00000161031|ENST00000340880|PGLYRP2', 'nc|ENSG00000161031|Q96PD5-2|PGLYRP2'] 124963 5897 VHTGDELL True NCI_RA007_Epitope_Rep3 882.44469671018 882.44358993586 30.171 2 -0.43835136867636104 0.12160146450606821 0.9087033152248093 ['PHKB|p.A639Qfs*7|1|0.4|ENSG00000102893|chr16:47650864-47650864|G/-|frameshift_variant', 'nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 71623 9378 MDPFNHRIF True NCI_RA007_Epitope_Rep4 1175.5545985956699 1175.5535099358601 42.927 2 -0.4384082196326225 0.12160810833714683 0.9087566302479081 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 103871 21686 SPYLLSPTF True PC9_epitope_Rep2 1023.52769805815 1023.5271749679301 88.891 1 -0.4384158500798798 0.12160810833714683 0.9087637845340443 ['ENST00000420027.3_1_20:48698513-48698663:-|nuORF'] 63344 10524 LLTKGQAP True PC9_epitope_Rep3 826.4912529797799 826.49014993586 45.419 2 -0.4384300308254646 0.12160810833714683 0.9087770793715796 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 47352 8431 IVGIRYEVGP True H1975_Epitope_Rep1 1101.61824439805 1101.6171499358602 37.356 2 -0.4384476269402698 0.12160810833714683 0.9087935744206551 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant'] 110695 12386 TGDTIALNIIK True NCI_RA007_Epitope_Rep1 1157.66558851329 1157.66448993586 52.154 2 -0.43845650802778924 0.12160810833714683 0.9088018990263544 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 112639 11573 TLFEQQNMY True H1975_Epitope_Rep1 1172.51721002744 1172.5161099358602 49.502 2 -0.438532028701192 0.12165689298667842 0.9088726671896579 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6', 'ENST00000574094.5_1_16:16275679-16317348:-|nuORF'] 84663 5982 QDIEKGWAKP True H1975_Epitope_Rep3 1170.6033226098998 1170.6022299358601 28.021 2 -0.43854100616691183 0.1216697173073012 0.9088810772684565 ['nc|ENSG00000174226|Q8N9S9-2|SNX31', 'ENSG00000174226|ENST00000311812|SNX31'] 88297 7837 QSEPNVLDD True NCI_RA007_Epitope_Rep5 1015.4458189089898 1015.44527496793 36.844 1 -0.4386100120088755 0.1216697173073012 0.9089457045480351 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80'] 20481 19370 EPKPDSNLL True PC9_epitope_Rep5 1011.52367530687 1011.52256993586 79.553 2 -0.43864423718657636 0.12171849843233624 0.908977746690333 ['ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3'] 106430 10210 STIPGTYVGV True H1975_Epitope_Rep3 992.51786165044 992.51676993586 44.318 2 -0.43868381909430043 0.12173338304579195 0.9090147944648647 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 12421 19978 DITVNETLVF True PC9_epitope_Rep2 1149.59175486669 1149.59064993586 82.247 2 -0.43876677551463683 0.1217821614384734 0.90909240698857 ['OR5L1|p.L199V|1|0.16|ENSG00000279395|chr11:55812061-55812061|C/G|missense_variant'] 123122 17929 VGKLWFVL True PC9_epitope_Rep4 960.5796740613598 960.57856993586 77.012 2 -0.4388564593885495 0.12179704446854664 0.9091762635410943 ['ENSG00000177291|ENST00000321660|GJD4'] 34433 7502 GPKEPGFEA True PC9_epitope_Rep3 930.4446967101799 930.44358993586 33.859 2 -0.4389056481122444 0.1218077985460338 0.9092222340507818 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 130789 10892 VTAGVKLI True PC9_epitope_Rep1 799.51673945163 799.51564993586 46.781 2 -0.43895036779134805 0.1218077985460338 0.9092640142945978 ['ENST00000287218.8_1_6:38120424-38120514:+|nuORF'] 46959 15792 ITPGGFSSV True PC9_epitope_Rep5 863.43888305375 863.43833496793 65.732 1 -0.43901508708843 0.1218077985460338 0.9093244565951059 ['ENSG00000087365|ENST00000322535|SF3B2'] 100909 13963 SLEYSFAL True PC9_epitope_Rep2 928.4541987647199 928.45310993586 58.984 2 -0.4390626593249421 0.12187351725072866 0.9093688676537167 ['ENST00000543940.1_1_12:124114818-124118191:-|nuORF'] 104656 11918 SQTGFVVL True H1975_Epitope_Rep2 849.45961849833 849.4590749679301 50.922 1 -0.43911639120303214 0.12190327718846375 0.9094190113467917 ['ENSG00000133048|ENST00000255409|CHI3L1'] 57873 13879 LEFLASNDP True H1975_Epitope_Rep2 1004.48147614172 1004.48036993586 58.529 2 -0.43912240418712245 0.12190327718846375 0.9094246216182595 ['nc|ENSG00000266074|Q9P281|BAHCC1'] 76230 12132 NPAVLSTAS True PC9_epitope_Rep1 858.44469671018 858.44358993586 51.528 2 -0.4391629681026922 0.12193510124544607 0.9094624626613689 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 117506 9115 TVRQGDTAI True PC9_epitope_Rep2 959.5036085686298 959.50250993586 40.401 2 -0.4391870888863586 0.12196485758340816 0.9094849592435744 ['ENSG00000185565|ENST00000490035|LSAMP'] 22783 12491 ETYARYRY True H1975_Epitope_Rep2 1120.53015766964 1120.5290699358602 53.138 2 -0.43918861681766336 0.12196485758340816 0.9094863841621137 ['nc|ENSG00000135454|Q00973-2|B4GALNT1', 'B4GALNT1|p.F523Sfs*8|1|0.27|ENSG00000135454|chr12:57626780-57626780|G/-|frameshift_variant', 'ENSG00000135454|ENST00000341156|B4GALNT1', 'B4GALNT1|p.G508A|1|0.31|ENSG00000135454|chr12:57626823-57626823|C/G|missense_variant', 'ENST00000553142.5_1_12:58020529-58021701:-|nuORF', 'B4GALNT1|p.G497R|1|0.25|ENSG00000135454|chr12:57626857-57626857|C/T|missense_variant'] 99880 15819 SILRHQNLL True PC9_epitope_Rep3 1092.6403768249602 1092.63926993586 66.004 2 -0.4393065201255388 0.12200742108740957 0.9095962925279434 ['ENSG00000100604|ENST00000216492|CHGA'] 103207 11281 SPIYWDTIP True H1975_Epitope_Rep3 1090.53351171458 1090.5324099358602 48.497 2 -0.43932296797741954 0.12200742108740957 0.909611617848372 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-3|DQX1', 'ENST00000473508.1_1_2:74750418-74753390:-|nuORF', 'nc|ENSG00000144045|Q8TE96-2|DQX1', 'ENST00000495597.1_1_2:74751010-74751370:-|nuORF'] 116479 19914 TTLYIQQLK True PC9_epitope_Rep4 1106.6335601090198 1106.6324699358602 84.735 2 -0.43932353798534457 0.12200742108740957 0.909612148922755 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant', 'ENST00000478884.5_1_2:203881095-203927086:+|nuORF'] 141527 19037 YTLNILEEI True PC9_epitope_Rep5 1106.58594121026 1106.5848499358601 78.254 2 -0.43932426314501677 0.12200742108740957 0.9096128245484073 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1'] 129761 22686 VRRAIKDIV True H1975_Epitope_Rep2 1068.67676233368 1068.67566993586 93.701 2 -0.4393529257883931 0.12202022940209749 0.9096395265582728 ['ENSG00000116198|ENST00000378230|CEP104', 'nc|ENSG00000116198|O60308-3|CEP104', 'ENST00000494653.5_1_1:3750422-3768971:-|nuORF'] 91436 18648 RHLNDRKFVF True PC9_epitope_Rep2 1330.7258377844198 1330.72420490379 77.095 3 -0.43937705027894847 0.12202022940209749 0.9096619966785996 ['ENSG00000174243|ENST00000308025|DDX23'] 24805 14846 FATLLRDGP True PC9_epitope_Rep1 988.5341804209199 988.53308993586 61.924 2 -0.4394696279621107 0.12205204662510165 0.9097481903627584 ['ENST00000216468.7_1_14:77805123-77805273:-|nuORF'] 119699 11129 VAVPTLNAL True NCI_RA007_Epitope_Rep2 896.5331177917599 896.53202993586 47.87 2 -0.4394889773098401 0.12206692079627277 0.9097661983189165 ['ENSG00000115649|ENST00000360507|CNPPD1'] 135519 9271 WKIKGFFFLP True NCI_RA007_Epitope_Rep2 1281.7274009242096 1281.72574490379 40.672 3 -0.4395550612930715 0.12209873615017111 0.909827682523457 ['ENST00000545294.5_1_1:162493384-162493546:+|nuORF'] 59859 13429 LGFTGAGIAA True PC9_epitope_Rep2 876.4705175351999 876.46942993586 56.937 2 -0.439560421230608 0.12211154028596598 0.9098326681258708 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 135390 7242 WHDAENQTV True PC9_epitope_Rep3 1098.47303671634 1098.47192993586 32.866 2 -0.43956308016452483 0.12211154028596598 0.9098351412912986 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 122782 12886 VGGPEIEVG True PC9_epitope_Rep6 855.4337976733099 855.43270993586 61.092 2 -0.4395979157479362 0.12213921498873473 0.9098675387708315 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 103444 9710 SPPSPSSPLP True H1975_Epitope_Rep3 964.48656152216 964.48546993586 42.369 2 -0.43964905298886636 0.12213921498873473 0.9099150825291765 ['ENST00000575425.1_1_17:7239912-7245270:+|nuORF', 'ENST00000570457.6_1_17:7239900-7240612:+|nuORF'] 129796 24747 VRRLGPHG True NCI_RA007_Epitope_Rep5 890.5198677694598 890.5193149679301 102.68 1 -0.4396764491675265 0.12213921498873473 0.9099405464679724 ['ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 113375 20465 TLRWRKRWRWR True PC9_epitope_Rep1 1698.9807641108196 1698.97912490379 83.53 3 -0.43979201471316387 0.12217102588426616 0.9100479068435222 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 80436 4887 PGKQGLRPPP True NCI_RA007_Epitope_Rep4 1045.6032630402499 1045.60216993586 25.247 2 -0.4398362805111145 0.12217968697066196 0.9100890064460354 ['ENST00000489427.1_1_3:49045513-49049068:+|nuORF', 'ENST00000491365.1_1_3:49045513-49045807:+|nuORF'] 85848 11655 QHEYTGKIF True NCI_RA007_Epitope_Rep5 1121.5505587610498 1121.54946993586 51.483 2 -0.4398669291392351 0.12217968697066196 0.9101174552964382 ['ENST00000554960.1_1_14:72152100-72171529:+|nuORF'] 44012 13625 IIGYLEIHP True PC9_epitope_Rep1 1053.5858816406098 1053.58478993586 57.265 2 -0.4398700718545413 0.12217968697066196 0.9101203720955855 ['ENSG00000057935|ENST00000405094|MTA3', 'ENST00000478602.1_1_2:42946162-42950180:+|nuORF'] 77951 11079 NVLLDNDRL True PC9_epitope_Rep6 1070.57202248162 1070.57092993586 53.535 2 -0.4398859400270033 0.12217968697066196 0.9101350985777903 ['ENSG00000105397|ENST00000525621|TYK2', 'ENST00000529422.1_1_19:10461953-10463789:-|nuORF', 'ENST00000530220.1_1_19:10461631-10463789:-|nuORF'] 9832 11504 AYLEAYKEF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 51.188 2 -0.43997754302545666 0.122186277332701 0.9102200783493102 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 121487 9126 VEYLRNNFR True PC9_epitope_Rep1 1209.62545503681 1209.62380490379 39.955 3 -0.4400158908647022 0.122186277332701 0.9102556370177047 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG'] 5647 5293 APAAGMNAA True PC9_epitope_Rep3 772.3537735307999 772.35266993586 25.437 2 -0.4400293248125213 0.122186277332701 0.9102680915649696 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 40267 13338 HQLESILAM-[Oxidation] True PC9_epitope_Rep2 1056.5273811687598 1056.5262899358602 56.577 2 -0.4400294401432155 0.122186277332701 0.9102681984823162 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 8835 9044 AVEGRLRR True H1975_Epitope_Rep1 955.5675462378699 955.56644993586 39.694 2 -0.4401099977748178 0.122186277332701 0.9103428579170239 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000485975.1_1_9:139261944-139262364:-|nuORF', 'ENST00000481053.5_1_9:139259475-139262364:-|nuORF', 'ENST00000489932.2_1_9:139258756-139262364:-|nuORF'] 12194 11242 DIFSFGMCAL True PC9_epitope_Rep1 1102.48273909502 1102.48164993586 48.121 2 -0.44016926510341636 0.12223501913891806 0.9103977583765374 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2'] 109680 7749 TEAWRGYNIT True PC9_epitope_Rep1 1209.5778361380499 1209.57619490379 34.628 3 -0.4401796844827849 0.12224988567654083 0.910407407636231 ['ENST00000497283.1_1_3:50649969-50651260:+|nuORF'] 68469 18771 LTFFSYSL True PC9_epitope_Rep5 976.4905842734399 976.48948993586 77.214 2 -0.44030396832222407 0.12228168823250457 0.9105224497293006 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000464865.5_1_7:140051761-140082350:-|nuORF', 'ENST00000467233.1_1_7:140080048-140082260:-|nuORF', 'ENST00000495257.1_1_7:140079085-140082350:-|nuORF', 'ENST00000460560.5_1_7:140055471-140082350:-|nuORF'] 107806 15469 SVTQSNKVSVT True PC9_epitope_Rep2 1148.6037165327198 1148.60260993586 64.779 2 -0.4403854642473501 0.12230934679153894 0.910597829796211 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12', 'PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion'] 60633 16124 LHKGLSLL True PC9_epitope_Rep3 879.55418758951 879.55308993586 67.17 2 -0.4403898878686884 0.12230934679153894 0.91060192018028 ['ENST00000464744.5_2_13:37625715-37633461:-|nuORF'] 75984 20336 NLVLFYQCLML True PC9_epitope_Rep6 1355.69815159487 1355.69650490379 90.924 3 -0.4403918618231447 0.12230934679153894 0.9106037453920117 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|170|2|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|25', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|25', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|25', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|25', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|25', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|25'] 87314 15189 QPQRGLLL True PC9_epitope_Rep1 923.5552502186698 923.55414993586 63.245 2 -0.44043022292710415 0.12233907432810039 0.9106392107231684 ['chr1:203219329-203222202|114|29.72|0.47|6.0|-|2|CHIT1,CHIT1|1'] 40269 14121 HQLESILAM-[Oxidation] True PC9_epitope_Rep5 1056.5273811687598 1056.5262899358602 59.327 2 -0.44044735750649794 0.12233907432810039 0.9106550486877859 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 97785 4690 SELAETPK True NCI_RA007_Epitope_Rep4 873.44436235701 873.44326993586 24.464 2 -0.4404775000260673 0.12234979340242498 0.9106829054925357 ['ENSG00000149016|ENST00000476907|TUT1', 'TUT1|p.E332K|1|0.16|ENSG00000149016|chr11:62578727-62578727|C/T|missense_variant'] 67351 18181 LSSGNNLFF True PC9_epitope_Rep5 997.48689587533 997.48578993586 74.943 2 -0.4405307399163098 0.12234979340242498 0.9107320933573055 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 73741 19185 NACVDKFTTL True PC9_epitope_Rep5 1110.53794547202 1110.5368499358601 78.833 2 -0.44058229986129593 0.12234979340242498 0.9107797110675799 ['ENSG00000158125|ENST00000379416|XDH'] 66101 11405 LSEKQVSQL True PC9_epitope_Rep3 1030.56587447202 1030.56476993586 48.872 2 -0.44058925897478485 0.12236051138768944 0.9107861367298017 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 23128 5877 EVKDVQLHLER True NCI_RA007_Epitope_Rep5 1364.7412130650398 1364.7395549037901 29.293 3 -0.44069003088609865 0.12236051138768944 0.9108791476015646 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 52425 24867 KKRLKKKVARA True NCI_RA007_Epitope_Rep3 1324.91430726044 1324.91320993586 107.52 2 -0.44070322497742676 0.12236051138768944 0.9108913204977336 ['ENST00000489152.5_1_2:74717680-74718064:+|nuORF', 'ENST00000449459.5_1_2:74710449-74718064:+|nuORF'] 96671 7996 SAKHIHLVL True NCI_RA007_Epitope_Rep4 1016.61309944796 1016.61200993586 37.523 2 -0.44081198686167467 0.12245796433953637 0.9109916199153092 ['ENST00000552245.5_1_12:99225710-99548222:-|nuORF'] 56798 11065 LDMVEDTEGEP True H1975_Epitope_Rep3 1233.50709883621 1233.5060099358602 47.654 2 -0.4408253338437216 0.12245796433953637 0.9110039229296392 ['ENSG00000241058|ENST00000377304|NSUN6'] 47663 19783 IWPKKGTAVFW True PC9_epitope_Rep5 1331.7390282370698 1331.7373949037901 81.141 3 -0.4408510993651363 0.12247074958939366 0.91102766974738 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 86467 23372 QKRKRKKSRYK True NCI_RA007_Epitope_Rep4 1504.9426472665998 1504.9415499358602 101.47 2 -0.4408524462510706 0.12247074958939366 0.9110289109832789 ['nc|ENSG00000112715|P15692-6|VEGFA', 'nc|ENSG00000112715|P15692-2|VEGFA', 'nc|ENSG00000112715|P15692-1|VEGFA', 'ENSG00000112715|ENST00000672860|VEGFA', 'nc|ENSG00000112715|P15692-14|VEGFA'] 72878 7526 MPRQLSAAAA True PC9_epitope_Rep2 1014.5280494946599 1014.52694993586 34.316 2 -0.44097262424461314 0.12253640365729766 0.9111396130201983 ['ENSG00000078081|ENST00000265598|LAMP3'] 13618 10957 DPICPSLQV True PC9_epitope_Rep5 970.4793679667399 970.47826993586 47.136 2 -0.44100946763411475 0.12258512385499737 0.9111735318367118 ['ENST00000406787.7_1_11:28131748-28131859:+|nuORF'] 23143 4854 EVKNDTSP True NCI_RA007_Epitope_Rep3 888.41887588516 888.41776993586 26.078 2 -0.4410878143887153 0.12259997968236769 0.9112456290859453 ['ENST00000295491.8_1_4:84382410-84382509:+|nuORF'] 113876 5696 TNPNHIYL True PC9_epitope_Rep3 970.4872302285 970.48612993586 26.983 2 -0.44109547758969614 0.12261068314568696 0.9112526787883113 ['ENST00000309534.10_1_3:88105110-88107183:-|nuORF'] 127963 9962 VPHLLTEA True PC9_epitope_Rep2 878.48616759934 878.48506993586 43.65 2 -0.4411004698504742 0.12261068314568696 0.9112572711664256 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 65826 20581 LSDKYTATL True PC9_epitope_Rep5 1010.5284263341399 1010.5273299358599 84.212 2 -0.44110759581497905 0.12261068314568696 0.9112638260456385 ['ENSG00000166415|ENST00000360509|WDR72'] 49781 4819 KHEAMITDLEE True NCI_RA007_Epitope_Rep2 1314.61256696426 1314.6109349037902 23.369 3 -0.44116306320400306 0.12263831516218596 0.9113148364571789 ['ENSG00000100345|ENST00000216181|MYH9'] 39659 18508 HLQDIKVKFS True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 76.214 2 -0.4411737985449121 0.12263831516218596 0.9113247067758461 ['nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4'] 112322 9943 TLAAGYQNFI True NCI_RA007_Epitope_Rep5 1096.55530978832 1096.5542099358602 44.887 2 -0.4411836016658236 0.12263831516218596 0.9113337193086539 ['ENSG00000164855|ENST00000297477|TMEM184A', 'ENST00000468535.5_1_7:1586590-1589169:-|nuORF'] 40881 5115 HSFSSATEI True NCI_RA007_Epitope_Rep4 977.44542498617 977.44432993586 26.188 2 -0.44119501405432165 0.1226531683285649 0.911344210507549 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 65548 16772 LRRQPPRSP True H1975_Epitope_Rep2 1105.64685918773 1105.64576993586 69.752 2 -0.44124764865372257 0.12268287315264681 0.9113925851104338 ['ENST00000550413.1_1_12:47473000-47473288:-|nuORF', 'ENST00000266581.4_1_12:47472787-47473288:-|nuORF'] 78993 6640 PALADGPAPV True NCI_RA007_Epitope_Rep5 906.4810822188999 906.47998993586 32.209 2 -0.4412485982314868 0.12268287315264681 0.9113934576614597 ['ENSG00000146216|ENST00000259750|TTBK1'] 132011 6235 VTSRQSEI True PC9_epitope_Rep2 918.4770594676199 918.47596993586 29.38 2 -0.4413602510477039 0.12274643238027526 0.911496010916689 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 29910 18339 FVWSGTAEA True PC9_epitope_Rep2 966.4446967101799 966.44358993586 75.871 2 -0.4413661620974674 0.12274643238027526 0.9115014378649613 ['ENSG00000124422|ENST00000261497|USP22'] 44376 8324 ILERRRRRLRL True PC9_epitope_Rep6 1535.9960798217896 1535.99498993586 41.65 2 -0.44151724586122076 0.12282483580472611 0.9116400675768568 ['ENST00000265070.6_1_5:32174239-32174446:-|nuORF'] 19018 9712 ELEVECATQLR True H1975_Epitope_Rep1 1289.6285513815699 1289.62744993586 42.284 2 -0.44155914320705797 0.12282483580472611 0.9116784837432815 ['ENSG00000141682|ENST00000316660|PMAIP1'] 99691 7835 SIHEIPREELR True PC9_epitope_Rep5 1377.7364620377698 1377.73480490379 35.081 3 -0.4416084455509766 0.12282483580472611 0.911723674311458 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 27536 10949 FNDGNAAVV True PC9_epitope_Rep3 905.4242956187699 905.42318993586 47.096 2 -0.4416856484086123 0.12287353792508082 0.9117944051851828 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 136988 11448 YAIVRFNQYFK True H1975_Epitope_Rep1 1447.7612202336297 1447.76012993586 49.015 2 -0.44177330854906033 0.12293916517146823 0.9118746673169128 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 2028 7190 AEKLERQLALP True NCI_RA007_Epitope_Rep3 1266.72958575218 1266.7284899358601 35.394 2 -0.4418469521703558 0.12294984851305835 0.9119420551929129 ['ENSG00000105373|ENST00000246802|NOP53', 'ENST00000598681.5_1_19:48248882-48259836:+|nuORF', 'ENST00000565166.2_1_15:95399162-95399906:+|nuORF'] 5110 9988 ALLIISYSS True H1975_Epitope_Rep1 965.5433481222901 965.54224993586 43.353 2 -0.44187136965467466 0.12294984851305835 0.9119643903018979 ['ENST00000543310.5_1_12:133617958-133618057:+|nuORF'] 58872 6825 LETAAPAPRPY True H1975_Epitope_Rep3 1184.61897267404 1184.6178699358602 31.208 2 -0.44187566201274914 0.12294984851305835 0.9119683161760377 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 84636 4335 QDFLEWRRR True NCI_RA007_Epitope_Rep5 1304.6738022115599 1304.67214490379 23.279 3 -0.4419284785750144 0.12301130593730959 0.9120166128854357 ['ENST00000456222.1_1_3:42605456-42610538:-|nuORF', 'nc|ENSG00000093183|Q9BRL7-3|SEC22C', 'nc|ENSG00000093183|Q9BRL7-2|SEC22C', 'ENSG00000093183|ENST00000264454|SEC22C'] 92133 17088 RLDLAFAWLY True PC9_epitope_Rep5 1266.67609362734 1266.6744449037901 70.75 3 -0.44194122883829723 0.12301130593730959 0.9120282691581952 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 121567 16262 VFDYEAAG True PC9_epitope_Rep3 870.3759484440199 870.3753949679301 67.689 1 -0.4420010580647808 0.12301130593730959 0.9120829500416435 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant'] 429 10911 AALNVRDNVGE True H1975_Epitope_Rep3 1156.58364979448 1156.58254993586 47.056 2 -0.4421233114319132 0.12305791558067901 0.9121946068980246 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 44095 5164 IINGKVGG True PC9_epitope_Rep3 756.4493881677998 756.44828993586 24.949 2 -0.4421455156571316 0.12305791558067901 0.9122148754942153 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 68646 7997 LTIHQRIRT True PC9_epitope_Rep6 1136.6778249628398 1136.67616490379 40.224 3 -0.4421541744699112 0.12307275712085569 0.9122227785636917 ['nc|ENSG00000168122|Q9NSJ1|ZNF355P'] 13116 17452 DLQSKVDTL True PC9_epitope_Rep4 1017.53423999057 1017.53314993586 75.126 2 -0.4421845651840381 0.12308759815867858 0.9122505126783285 ['CON__Q6IFZ6'] 102331 15208 SLSSHVYSFI True PC9_epitope_Rep2 1138.5658744720201 1138.56476993586 63.76 2 -0.442263752161459 0.1231193623178595 0.9123227476083159 ['ENST00000502732.5_1_1:179076600-179076849:-|nuORF'] 4943 7380 ALGENGVIK True PC9_epitope_Rep2 899.5076313199099 899.50652993586 33.768 2 -0.442280746044071 0.1231321182582796 0.9123382439079359 ['ENST00000496004.5_1_7:151188088-151217094:-|nuORF'] 48648 5348 KARKVIVEL True NCI_RA007_Epitope_Rep3 1054.6862643882198 1054.6851699358601 28.044 2 -0.4422837450778695 0.1231321182582796 0.9123409784452896 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|123|3|sense', 'nc|ENSG816|P62685|ERVK-8_gag', 'nc|ENSG846|Q9YNA8|ERVK-19_gag', 'nc|ENSG841|P62683|ERVK-21_gag', 'nc|ENSG838|P63145|ERVK-24_gag', 'nc|ENSG827|Q7LDI9|ERVK-6_gag', 'nc|ENSG820|P63130|ERVK-7_gag', 'nc|ENSG810|P63126|ERVK-9_gag', 'nc|ENSG800|P62684|HERVK_113_gag', 'nc|ENSG809|P63128|ERVK-9_pol'] 67095 7385 LSQGEVWAA True H1975_Epitope_Rep2 959.4712458111898 959.47014993586 33.346 2 -0.44241962132464013 0.12314278945409009 0.9124648059975257 ['ENSG00000130518|ENST00000392413|IQCN'] 38131 6023 HCRLLWRMQDY True PC9_epitope_Rep4 1519.71765825283 1519.71601490379 30.147 3 -0.44242048883119756 0.12314278945409009 0.9124655961682938 ['ENST00000257836.3_1_11:32874897-32874975:+|nuORF'] 64170 12219 LPFWSAYVP True H1975_Epitope_Rep1 1078.5487678559 1078.54766993586 52.021 2 -0.44247282049850645 0.12314278945409009 0.9125132529687762 ['ENST00000394507.5_2_7:91874335-91874458:-|nuORF', 'ENST00000340022.6_2_7:91874335-91874845:-|nuORF'] 19893 12797 ELTQSICLRI True PC9_epitope_Rep1 1174.6379938664597 1174.6368899358602 54.097 2 -0.44251562744968564 0.123157627548862 0.9125522217933524 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 109176 9937 TANEEEVKMMC True NCI_RA007_Epitope_Rep5 1283.51959517955 1283.51848993586 44.865 2 -0.44260827830520993 0.12318938676052525 0.9126365218998936 ['ENST00000444025.1_1_7:23602816-23603164:-|nuORF'] 71701 8164 MEEELQREGS True H1975_Epitope_Rep1 1206.5186665794197 1206.5175699358601 36.344 2 -0.44263711131810046 0.12320005414643226 0.9126627439859025 ['ENST00000589222.5_2_17:59457929-59469483:+|nuORF'] 84510 7022 QAPHEDAVV True PC9_epitope_Rep2 964.4614094034799 964.46030993586 32.413 2 -0.442651300508095 0.12320005414643226 0.9126756461744073 ['NDRG2|p.L311Cfs*12|1|0.12|ENSG00000165795|chr14:21018005-21018005|G/-|frameshift_variant', 'nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF'] 56938 10637 LDQLQLEG True H1975_Epitope_Rep1 914.4709114580199 914.46980993586 45.872 2 -0.4426989427584586 0.12320005414643226 0.9127189568846626 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 79856 6717 PEKDEDDMEK True H1975_Epitope_Rep3 1234.50234780894 1234.50070490379 30.793 3 -0.4427079472668372 0.12321072044939257 0.9127271409456752 ['PEAK1|p.E1420K|1|0.13|ENSG00000173517|chr15:77115139-77115139|C/T|missense_variant'] 122778 14417 VGGPEIEVG True PC9_epitope_Rep2 855.4337976733099 855.43270993586 60.724 2 -0.4427110193831479 0.12321072044939257 0.9127299330164076 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 112142 9510 TIYNGKNPPTL True PC9_epitope_Rep3 1216.6451874218799 1216.6435349037902 41.528 3 -0.4427261741058769 0.12321072044939257 0.9127437053149832 ['ADAMTS12|p.S1011Y|1|0.16|ENSG00000151388|chr5:33576994-33576994|G/T|missense_variant'] 54093 15496 KVLFKLLL True PC9_epitope_Rep5 972.6735744461998 972.67246993586 64.614 2 -0.4427751070809566 0.12323830471195331 0.9127881636669782 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 91845 21853 RKKKLKKKKTL True NCI_RA007_Epitope_Rep5 1397.9922232279696 1397.99056490379 91.184 3 -0.44281283942507144 0.12323830471195331 0.9128224342198341 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 8839 10481 AVELLKQID True NCI_RA007_Epitope_Rep2 1027.5913609438699 1027.59026993586 45.362 2 -0.44281306181687125 0.12323830471195331 0.9128226361786423 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 16570 7273 EELVRRNVEL True PC9_epitope_Rep1 1255.6884492161898 1255.68679490379 32.788 3 -0.44283252790636823 0.12324688287739599 0.9128403124189627 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 116114 7819 TSSFPAPPSSP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 35.023 2 -0.4429003090605056 0.12324688287739599 0.912901840656029 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060600-7060840:+|nuORF'] 39919 5208 HPGSFDVVHVK True NCI_RA007_Epitope_Rep3 1220.6302060640799 1220.62855490379 27.486 3 -0.4430490200266712 0.12324688287739599 0.913036720271878 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000443195.1_1_1:20852889-20853234:+|nuORF'] 102893 5473 SPAPPGPQA True PC9_epitope_Rep4 820.40791727864 820.40682993586 27.801 2 -0.44306662051743906 0.12324688287739599 0.9130526735254263 ['ENSG00000104881|ENST00000360957|PPP1R13L', 'PPP1R13L|p.G62V|1|0.14|ENSG00000104881|chr19:45398018-45398018|C/A|missense_variant', 'ENST00000585905.1_1_19:45898523-45909561:-|nuORF'] 117078 16942 TVIQRAYRRYR True NCI_RA007_Epitope_Rep1 1480.8375134917198 1480.83640993586 70.029 2 -0.44313224539748663 0.12325545988192106 0.913112137401569 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 5008 16076 ALIDCFLDGY True H1975_Epitope_Rep1 1128.5161473982798 1128.5150499358601 67.176 2 -0.4431512686217857 0.12325545988192106 0.9131293690371027 ['ENSG00000069248|ENST00000261396|NUP133'] 17196 7846 EGSVLQAKL True PC9_epitope_Rep4 943.5338460677499 943.53274993586 37.593 2 -0.4431677042826572 0.12325545988192106 0.9131442547581134 ['ENSG00000013364|ENST00000357402|MVP', 'REL-MVP|1|fusion'] 69422 11060 LTYEEEEVA True H1975_Epitope_Rep2 1081.4815357113698 1081.48042993586 47.573 2 -0.443204596002338 0.12325545988192106 0.9131776605532079 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B', 'ZBTB7B|p.G240C|1|0.11|ENSG00000160685|chr1:155015378-155015378|G/T|missense_variant'] 47011 8806 ITQVKSKHLKD True H1975_Epitope_Rep1 1295.7561348531897 1295.7550299358602 38.798 2 -0.4432374322696623 0.12327029130155293 0.9132073860554458 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 79531 3926 PDAETEAQQRL True NCI_RA007_Epitope_Rep2 1256.5996937814398 1256.5985899358602 19.906 2 -0.44326999524162536 0.12329995263549631 0.913236856667582 ['ENST00000486492.5_1_7:149255763-149318218:-|nuORF'] 132719 24645 VVHRGRPG True NCI_RA007_Epitope_Rep5 876.5042177053199 876.50366496793 102.28 1 -0.44328375743441956 0.12329995263549631 0.9132493096844552 ['ENSG00000129911|ENST00000250916|KLF16'] 3507 11924 AGLNSSWVEL True PC9_epitope_Rep5 1074.53457434374 1074.53346993586 50.862 2 -0.4433412842116914 0.12331478254985875 0.913301349598154 ['ENSG00000104765|ENST00000380629|BNIP3L'] 47230 14462 IVAQDGVGLL True PC9_epitope_Rep5 983.5651461960298 983.56404993586 60.628 2 -0.4434547492003059 0.12339309878213803 0.9134039240281772 ['ENST00000480424.6_1_16:630665-633032:+|nuORF'] 81419 13100 PLEKHYSVV True H1975_Epitope_Rep3 1070.5760452329 1070.57494993586 55.634 2 -0.44347004575147975 0.12339309878213803 0.9134177454446112 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 126699 17735 VLPFLCIL True PC9_epitope_Rep1 916.54559705176 916.54448993586 73.016 2 -0.4435607989681563 0.12339309878213803 0.9134997128174285 ['L1PA3_dup1120|chr2:110351377-110353837:-|1.2372248013512652|0.4358200479832063|1.51|529.0|156|3|anti-sense', 'L1PA3_dup1115|chr2:110017555-110020014:+|1.8409101932023448|0.4680770941019235|1.98|537.0|129|2|anti-sense'] 56061 15389 LATAVTGAALI True PC9_epitope_Rep5 999.5964463243099 999.59534993586 64.201 2 -0.44357634744507923 0.12339331619537275 0.9135137502010088 ['ENSG00000188760|ENST00000373883|TMEM198'] 46232 3618 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 18.933 2 -0.4435950507040248 0.12339331619537275 0.9135306335005455 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 111820 20423 TILPPLEKL True PC9_epitope_Rep3 1022.6375828603 1022.6364899358599 83.81 2 -0.44368403137846546 0.12339331619537275 0.9136109218139881 ['ENSG00000167701|ENST00000394955|GPT'] 54296 12643 KWYYFRTRLNK True NCI_RA007_Epitope_Rep2 1573.8517665735296 1573.8506699358602 53.791 2 -0.44369897885649373 0.12339331619537275 0.9136244035978933 ['ENST00000483733.1_1_3:120424930-120428703:-|nuORF'] 140973 23321 YSGAAFSDFL True PC9_epitope_Rep5 1076.4814761417201 1076.4803699358602 94.683 2 -0.443712240661768 0.12339331619537275 0.9136363636739119 ['DGKI|p.A565S|1|0.34|ENSG00000157680|chr7:137578275-137578275|C/A|missense_variant'] 111917 5344 TIPFKNCYK True H1975_Epitope_Rep3 1112.56885167748 1112.56774993586 25.625 2 -0.44374722414954215 0.12339331619537275 0.9136679073289847 ['MYOC|p.R470C|1|0.13|ENSG00000034971|chr1:171636032-171636032|G/A|missense_variant'] 114275 10284 TPPGPLASA True PC9_epitope_Rep4 809.42831837005 809.4272299358599 47.243 2 -0.443785569032623 0.12339331619537275 0.9137024718877607 ['ENSG00000124875|ENST00000226317|CXCL6'] 120903 14349 VENLPRTVIR True H1975_Epitope_Rep1 1195.7037053575098 1195.7026099358602 60.386 2 -0.4437933354149276 0.12339331619537275 0.9137094713312067 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 94072 25361 RRLKHFPR True PC9_epitope_Rep3 1108.67301436592 1108.67247496793 102.97 1 -0.44379528242797295 0.12340814152108102 0.913711226007415 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 6265 5637 APRCASCPP True H1975_Epitope_Rep2 900.3945927969598 900.39348993586 26.682 2 -0.4438753611521667 0.12345679012345678 0.9137833707754802 ['ENSG00000205899|ENST00000391429|BHLHA9'] 90683 9077 REQLKEIYPSW True H1975_Epitope_Rep3 1447.7459640923098 1447.7448699358602 39.901 2 -0.4438871295684367 0.12346952580666982 0.9137939693713278 ['ENST00000425348.1_1_X:53483765-53483951:-|nuORF'] 26754 10505 FKDLGEENFK True PC9_epitope_Rep5 1225.5979028762897 1225.5962549037902 45.394 3 -0.4439263739425335 0.12346952580666982 0.9138293056010882 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 103622 10588 SPTGGFVDA True PC9_epitope_Rep6 849.3868474808899 849.3862949679301 51.542 1 -0.4440605206236621 0.12353299286366558 0.9139500104849214 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant'] 138450 8903 YHLMKSSFIL True NCI_RA007_Epitope_Rep3 1237.65291565461 1237.65127490379 42.105 3 -0.4440730737030442 0.12353299286366558 0.9139612991531695 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13'] 137770 23673 YEPNFIFF True PC9_epitope_Rep2 1075.5014833103098 1075.50038993586 96.533 2 -0.44409590243346986 0.1235457251082251 0.9139818255735096 ['ENSG00000087365|ENST00000322535|SF3B2', 'SF3B2|p.M619Cfs*3|1|0.12|ENSG00000087365|chr11:66061757-66061757|G/-|frameshift_variant'] 130340 13888 VSKLWSTF True PC9_epitope_Rep4 966.51746772762 966.51636993586 61.322 2 -0.44410097623398265 0.1235457251082251 0.9139863871686988 ['AKR1B10|p.P81S|1|0.17|ENSG00000198074|chr7:134531914-134531914|C/T|missense_variant'] 75370 23847 NISVPGLQ True NCI_RA007_Epitope_Rep3 826.45486747106 826.45376993586 103.33 2 -0.4441979042350965 0.12356054585115918 0.9140734948757626 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF', 'nc|ENSG00000131023|O95835-2|LATS1'] 68234 20179 LTEALENAGI True PC9_epitope_Rep4 1029.5342399905699 1029.5331499358601 85.756 2 -0.4442792131184958 0.12359227569413914 0.9141465141018482 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 38285 4396 HEERERVRYF True H1975_Epitope_Rep3 1419.7007452353898 1419.6991049037902 22.03 3 -0.4443204665478684 0.1236198238108926 0.9141835435316202 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 98686 6516 SGEIKKKY True H1975_Epitope_Rep3 951.5389314481899 951.53782993586 30.033 2 -0.44433630697166804 0.1236198238108926 0.9141977587903486 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5'] 14698 6346 DVKADNLSSD True PC9_epitope_Rep3 1062.4829326937001 1062.48182993586 29.437 2 -0.444377319541306 0.1236198238108926 0.9142345552720376 ['MAP3K14|p.V521_L522del|1|0.3|ENSG00000006062|chr17:45273594-45273599|GAGCAC/-|inframe_deletion'] 67189 6264 LSRCPDLRPGK True NCI_RA007_Epitope_Rep2 1240.6710253302397 1240.66936490379 28.97 3 -0.44448942118229556 0.12364945978391356 0.9143350712743348 ['ENST00000552233.5_1_12:53823563-53823812:+|nuORF'] 73855 20393 NAPVLLALLG True H1975_Epitope_Rep3 979.6066170851899 979.60552993586 85.267 2 -0.4445263406003336 0.12364945978391356 0.9143681553246447 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000586392.1_1_19:34884680-34890938:+|nuORF', 'CON__Q3ZBD7'] 60007 10292 LGITKEC[Carbamidomethyl]VMR True NCI_RA007_Epitope_Rep2 1205.6260495631998 1205.62494993586 44.623 2 -0.444605310716874 0.12366427701880157 0.9144388887172821 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 130899 13398 VTDDLVC[Carbamidomethyl]LVYK True H1975_Epitope_Rep3 1323.6744392242601 1323.6733499358602 56.802 2 -0.44463974201475065 0.12367909375264181 0.9144697147092347 ['ENSG00000143742|ENST00000304786|SRP9'] 28787 18759 FSTTVIQNV True PC9_epitope_Rep1 1007.5287606873098 1007.52817496793 76.945 1 -0.4446859132142431 0.12368763630830615 0.9145110379024496 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.D78E|1|0.25|ENSG00000100554|chr14:67350616-67350616|G/C|missense_variant'] 58136 9195 LEKMKEERERI True PC9_epitope_Rep3 1459.7816979780298 1459.78006490379 40.306 3 -0.4447532039756632 0.12368763630830615 0.9145712355467581 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B'] 18939 11058 ELEGNALEELR True NCI_RA007_Epitope_Rep1 1271.6357449369898 1271.6346499358601 47.008 2 -0.4447779170896787 0.12368763630830615 0.9145933354431628 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 3831 10848 AGVLTGLG True PC9_epitope_Rep5 686.39628996578 686.39574496793 46.714 1 -0.44494033020986334 0.12368763630830615 0.9147384647612044 ['ENSG00000100156|ENST00000681075|SLC16A8'] 44093 11269 IINFISWAP True H1975_Epitope_Rep3 1059.57531695691 1059.5742099358602 48.45 2 -0.444948212445329 0.12370245139475909 0.9147455033198917 ['ENSG00000011028|ENST00000303375|MRC2', 'MRC2|p.R1138Gfs*67|1|0.25|ENSG00000011028|chr17:62689598-62689598|C/-|frameshift_variant', 'ENST00000446119.2_1_17:60758997-60759418:+|nuORF'] 83137 14017 PSQPVVTEITK True PC9_epitope_Rep1 1197.6605031328497 1197.6594099358601 58.755 2 -0.4449744669229878 0.12371726598028773 0.9147689443957674 ['nc|ENSG00000154134|Q96MS0-2|ROBO3', 'ENSG00000154134|ENST00000397801|ROBO3'] 61148 18833 LIKENGPLSP True PC9_epitope_Rep1 1066.60225998074 1066.60116993586 77.226 2 -0.44501616951190404 0.1237299883353338 0.9148061679045345 ['ENST00000528749.1_1_1:150934626-150935279:+|nuORF'] 2987 14447 AFGYYGPLR True PC9_epitope_Rep6 1042.5236157372199 1042.5225099358602 67.461 2 -0.4450306594327018 0.1237299883353338 0.9148190985770845 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 128439 20245 VPRWLRPWW True NCI_RA007_Epitope_Rep2 1294.7087311683 1294.70762993586 83.78 2 -0.4451047667689172 0.12376170673158197 0.9148852074435389 ['ENST00000481206.1_1_14:105935538-105936549:+|nuORF'] 130054 15179 VSDALLVPD True PC9_epitope_Rep2 927.49131254943 927.49020993586 63.643 2 -0.44512229758601307 0.12377233463495445 0.9149008403036766 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP', 'nc|ENSG00000142192|P05067-2|APP', 'APP|p.P365Lfs*46|1|0.16|ENSG00000142192|chr21:25982474-25982474|G/-|frameshift_variant', 'APP|p.A416Qfs*79|1|0.21|ENSG00000142192|chr21:25976007-25976007|C/-|frameshift_variant', 'ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 40266 13245 HQLESILAM-[Oxidation] True PC9_epitope_Rep2 1056.5273811687598 1056.5262899358602 56.223 2 -0.44512967832704214 0.12377233463495445 0.9149074213066803 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 7558 4442 ASEKMAQGQLK True NCI_RA007_Epitope_Rep3 1189.6125073946098 1189.6108649037901 24.272 3 -0.4451464855908665 0.12377233463495445 0.9149224059439386 ['ENSG00000198597|ENST00000355537|ZNF536'] 22630 6760 ETMTKTEEV True PC9_epitope_Rep2 1066.48524119282 1066.4841499358602 31.409 2 -0.4452110400299801 0.12378714628621658 0.914979940773025 ['ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 127977 11129 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 47.797 2 -0.44522309558736256 0.12380195743673827 0.9149906820460001 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 125161 20040 VIHATRRDIP True H1975_Epitope_Rep2 1176.6727395824 1176.6716499358602 83.064 2 -0.4453304829625108 0.12385057471264367 0.9150863152494831 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 60221 10680 LGPTQEAL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 48.826 2 -0.4454755316284552 0.12388228731765859 0.9152153531672224 ['ENST00000318407.4_1_2:242511838-242512021:+|nuORF'] 127968 11330 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 48.586 2 -0.4455003086038667 0.12392671218984518 0.9152373797259667 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 112810 5989 TLIHHNEAVL True NCI_RA007_Epitope_Rep4 1145.61930702721 1145.61820993586 29.655 2 -0.44552760204657266 0.12392671218984518 0.915261638163871 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 21009 3360 EQRWHMKRWE True NCI_RA007_Epitope_Rep1 1484.7095360972796 1484.70790490379 16.96 3 -0.445528036828397 0.12392671218984518 0.9152620245538702 ['F5|p.R345W|1|0.11|ENSG00000198734|chr1:169555267-169555267|G/A|missense_variant'] 56833 16884 LDNYFRHLWNK True PC9_epitope_Rep3 1504.75753183552 1504.75588490379 70.1 3 -0.44565208923107175 0.12395856218207628 0.9153722126459635 ['ENSG00000196511|ENST00000360057|TPK1'] 19793 7127 ELSKEECCSTG True H1975_Epitope_Rep1 1184.4689395056798 1184.4678499358602 32.44 2 -0.4456891465652703 0.12395856218207628 0.9154051062702506 ['nc|ENSG00000134363|P19883-2|FST', 'ENSG00000134363|ENST00000256759|FST'] 21831 7044 ESAKSIEER True H1975_Epitope_Rep3 1047.51965255559 1047.5185499358602 32.059 2 -0.4457662810598419 0.12395856218207628 0.9154735413197669 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 87875 10730 QRIDEFEAM-[Oxidation] True PC9_epitope_Rep1 1153.5073740001699 1153.50626993586 46.161 2 -0.4457915841991684 0.12395856218207628 0.9154959810552582 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 97882 6509 SELSDQFAP True H1975_Epitope_Rep3 992.4450906329998 992.44398993586 30.006 2 -0.4458277355070966 0.12395856218207628 0.9155280330575585 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant'] 123408 12179 VGNALLNVVL True NCI_RA007_Epitope_Rep5 1010.61243074162 1010.61132993586 53.5 2 -0.4458529797727581 0.12395856218207628 0.9155504090178957 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 84559 10241 QATREYTL True PC9_epitope_Rep1 980.4927095317599 980.49160993586 44.273 2 -0.4458561679366083 0.12395856218207628 0.915553234597597 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'KDM5C|p.Y601Lfs*21|1|0.69|ENSG00000126012|chrX:53201918-53201919|-/A|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 61252 21233 LINRPILVL True PC9_epitope_Rep1 1049.6961007959299 1049.69500993586 86.497 2 -0.4458653569549091 0.12395856218207628 0.9155613781405494 ['ENSG00000186765|ENST00000417245|FSCN2', 'nc|ENSG00000186765|O14926-2|FSCN2'] 117387 19346 TVPLLQEV True PC9_epitope_Rep1 897.5171333744499 897.51602993586 79.219 2 -0.4460046704207005 0.12395856218207628 0.9156847638892439 ['ENST00000549478.1_1_12:104350783-104350876:-|nuORF'] 45589 7461 IQVAEAEVK True PC9_epitope_Rep5 985.54441075145 985.54330993586 33.653 2 -0.44612657371809367 0.12397127165188002 0.9157926104623819 ['ENSG00000117724|ENST00000366955|CENPF'] 64210 15311 LPGPPEPPSP True H1975_Epitope_Rep2 986.5072969667399 986.50618993586 64.052 2 -0.44612951276949936 0.12397127165188002 0.9157952092291708 ['ENST00000515007.6_1_5:77806081-77806153:-|nuORF'] 47497 9977 IVQLETESKRL True PC9_epitope_Rep6 1314.7507151195798 1314.74960993586 48.928 2 -0.4461534569980542 0.12398607543598757 0.9158163787574595 ['nc|ENSG00000112029|Q9UKT4-2|FBXO5', 'ENSG00000112029|ENST00000229758|FBXO5'] 5452 8000 ALVNRDRTL True PC9_epitope_Rep5 1056.6039913162401 1056.60288993586 35.711 2 -0.4461891466567983 0.1240346756341146 0.9158479246029292 ['FICD|p.K210Rfs*56|1|0.17|ENSG00000198855|chr12:108518722-108518722|C/-|frameshift_variant', 'ENST00000361549.2_1_12:108912031-108913249:+|nuORF', 'ENSG00000198855|ENST00000552695|FICD'] 2367 3959 AEQAERYDEM-[Oxidation] True H1975_Epitope_Rep2 1256.49793151528 1256.4968299358602 20.295 2 -0.44627400377742305 0.124049477846497 0.9159228905671107 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 100901 8098 SLEVILKSP True H1975_Epitope_Rep3 984.5855472874399 984.58444993586 36.123 2 -0.4464118460303956 0.12411287597161202 0.9160445492130037 ['STMN3|p.F54L|1|0.24|ENSG00000197457|chr20:63643885-63643885|G/T|missense_variant'] 25441 6790 FEEAAGAAP True H1975_Epitope_Rep3 861.3868474808897 861.38574993586 31.073 2 -0.44642349938105713 0.12411287597161202 0.9160548277600891 ['ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000106638|ENST00000305632|TBL2'] 110816 4966 TGLSTAVLAA True H1975_Epitope_Rep2 902.5072969667399 902.50618993586 24.185 2 -0.44652313030678553 0.1241678775386071 0.9161426624690536 ['nc|ENSG00000213689|Q9NSU2-2|TREX1', 'ENSG00000213689|ENST00000625293|TREX1', 'nc|ENSG00000213689|Q9NSU2-1|TREX1'] 46110 13747 ISICKMQEV True PC9_epitope_Rep2 1049.5249382601698 1049.5238499358602 58.165 2 -0.44654541085979843 0.1241678775386071 0.9161622946542399 ['nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6', 'nc|ENSG00000186976|Q5THR3-3|EFCAB6'] 45928 13970 ISEGKISTI True PC9_epitope_Rep2 946.53351171458 946.53240993586 59.009 2 -0.4465790352970338 0.1241678775386071 0.916191915149358 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 91807 23209 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 95.738 2 -0.44658199254600117 0.1241678775386071 0.9161945198400511 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 131138 19909 VTEGVIVPE True PC9_epitope_Rep4 941.5069626135698 941.50641496793 84.714 1 -0.4465995818054809 0.1241678775386071 0.9162100107536242 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 121571 13992 VFDYEAAG True PC9_epitope_Rep6 870.3759484440199 870.3753949679301 65.677 1 -0.44661660825286364 0.1241678775386071 0.9162250037391542 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant'] 101709 4697 SLMSPLEPGDP True H1975_Epitope_Rep2 1141.53252573841 1141.5314299358602 23.16 2 -0.4467162016354112 0.12419537414046529 0.9163126581646316 ['ENSG00000088280|ENST00000336689|ASAP3', 'nc|ENSG00000088280|Q8TDY4-3|ASAP3', 'nc|ENSG00000088280|Q8TDY4-2|ASAP3'] 138181 8529 YGNVTSLGY True H1975_Epitope_Rep2 972.4552613938799 972.45416993586 37.762 2 -0.446721421260798 0.12419537414046529 0.9163172499751806 ['nc|ENSG00000186448|O14709-2|ZNF197'] 57963 7830 LEGRLSLN True PC9_epitope_Rep2 900.50288029264 900.50178993586 35.488 2 -0.44679535471833004 0.12419537414046529 0.9163822682135419 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant'] 117466 16675 TVQTWMRRHRL True PC9_epitope_Rep5 1482.79901980802 1482.79738490379 69.144 3 -0.44688426476869725 0.12425875555405383 0.9164604012634124 ['nc|ENSG00000197275|Q9Y620-2|RAD54B'] 183 4782 AAEKAAIAN True NCI_RA007_Epitope_Rep3 857.4606811274899 857.45958993586 25.774 2 -0.44691339182288137 0.12425875555405383 0.9164859844695631 ['GABRB2|p.S347I|1|0.1|ENSG00000145864|chr5:161330920-161330920|C/A|missense_variant'] 72545 10626 MLLENIILL True NCI_RA007_Epitope_Rep4 1070.64095398858 1070.6398499358602 47.722 2 -0.4469572687331415 0.12432423300446006 0.9165245105349243 ['ENSG00000275591|ENST00000618742|XKR5'] 45573 10444 IQSPSNWNP True PC9_epitope_Rep1 1041.48795850449 1041.48686993586 45.06 2 -0.44699575060737734 0.12433692603980133 0.916558287209194 ['ENSG00000188227|ENST00000627814|ZNF793', 'nc|ENSG00000188227|Q6ZN11-2|ZNF793', 'nc|ENSG00000188227|Q6ZN11-3|ZNF793'] 20253 18533 ENMRRPYFPV True NCI_RA007_Epitope_Rep1 1307.6444762292301 1307.6433699358602 76.228 2 -0.446999632872226 0.12433692603980133 0.9165616941491699 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'ENST00000466229.5_1_1:196648727-196709933:+|nuORF', 'nc|ENSG00000116785|Q02985-2|CFHR3', 'nc|ENSG00000000971|P08603-2|CFH', 'ENSG00000116785|ENST00000367425|CFHR3'] 351 14653 AAIRTDSLDV True PC9_epitope_Rep1 1059.5560380643099 1059.5549499358601 61.185 2 -0.4470241135782503 0.12435171889517696 0.9165831748650014 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G'] 579 11456 AAREVKLL True PC9_epitope_Rep3 898.5600012459398 898.55890993586 49.063 2 -0.44703395383124267 0.12436441035863303 0.9165918079313007 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1'] 109497 6442 TDLSSFHGGT True H1975_Epitope_Rep2 1020.4512386426001 1020.4501499358599 29.699 2 -0.4470738802753041 0.12436441035863303 0.9166268285364612 ['ENST00000469300.6_1_2:128400496-128412764:-|nuORF'] 101890 18917 SLPRSRWWIT True H1975_Epitope_Rep1 1300.7040397106798 1300.70294993586 78.878 2 -0.44710260111207845 0.1243918918918919 0.9166520127162257 ['ENST00000425394.6_1_12:56713258-56713451:-|nuORF'] 91806 23122 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 95.398 2 -0.44712147759930104 0.1243918918918919 0.9166685612706129 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 2332 10314 AEPQVERGSQE True H1975_Epitope_Rep1 1228.5683936531598 1228.5672899358601 44.62 2 -0.44714967773855097 0.1243918918918919 0.9166932784669114 ['nc|ENSG00000167528|Q96N77-2|ZNF641', 'nc|ENSG00000167528|Q96N77-3|ZNF641', 'ENSG00000167528|ENST00000547026|ZNF641', 'nc|ENSG00000167528|Q96N77|ZNF641'] 23172 19845 EVLFVKDLTL True PC9_epitope_Rep6 1175.6801759482698 1175.67906993586 88.994 2 -0.4471903364173312 0.12441937064000134 0.916728904547854 ['ENSG00000249715|ENST00000624922|FER1L5', 'ENST00000505256.6_1_2:97312155-97317763:+|nuORF'] 95460 16181 RWLGRWRRKRR True H1975_Epitope_Rep1 1624.9763474367198 1624.9752499358601 67.586 2 -0.4473504709305934 0.12441937064000134 0.9168690923422059 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2'] 36911 20909 GVLPQLSMV True PC9_epitope_Rep4 942.5208388559 942.52029496793 88.586 1 -0.4473666124839884 0.12441937064000134 0.9168832121085818 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 74486 10769 NFEDVAFDEK True NCI_RA007_Epitope_Rep2 1212.5298828861198 1212.52878993586 46.491 2 -0.4473861289303251 0.12444894856853306 0.9169002813155457 ['ENSG00000185624|ENST00000331483|P4HB'] 135576 16170 WKYELRIRYLP True PC9_epitope_Rep1 1535.8612686280696 1535.85905987172 67.013 4 -0.4473890587238703 0.12444894856853306 0.916902843472883 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 56141 7579 LAVKPLGP True NCI_RA007_Epitope_Rep1 793.5061747679299 793.50506993586 33.474 2 -0.44742675518466063 0.12446163460401642 0.9169358036829707 ['ENSG00000186111|ENST00000335312|PIP5K1C', 'nc|ENSG00000186111|O60331-4|PIP5K1C', 'nc|ENSG00000186111|O60331-3|PIP5K1C', 'nc|ENSG00000186111|O60331-2|PIP5K1C'] 41503 15860 HYMPPPYASL True PC9_epitope_Rep4 1174.5481162328997 1174.5470099358602 68.937 2 -0.44748461072790996 0.12446163460401642 0.9169863683790862 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 79165 10046 PAMIPLWMFP True NCI_RA007_Epitope_Rep1 1201.6027946580498 1201.6016899358601 43.086 2 -0.447548459026073 0.12447642210512093 0.9170421399758759 ['ENTPD5-ALDH6A1|1|fusion', 'ENST00000554231.5_1_14:74537838-74551097:-|nuORF', 'nc|ENSG00000119711|Q02252-2|ALDH6A1', 'ENSG00000119711|ENST00000553458|ALDH6A1'] 76265 6714 NPKEFYHEV True PC9_epitope_Rep4 1161.54547338061 1161.54436993586 33.012 2 -0.44764458066159524 0.12449120910672364 0.9171260415754113 ['ENSG00000174231|ENST00000304992|PRPF8'] 141051 22410 YSLWVYQCNSL True PC9_epitope_Rep2 1374.6278231055799 1374.62672993586 91.693 2 -0.4478003338865672 0.12453977368687721 0.9172618380577067 ['ENST00000460720.5_1_2:9546965-9548358:-|nuORF', 'ENST00000490426.5_1_2:9546965-9563580:-|nuORF', 'ENSG00000119185|ENST00000355346|ITGB1BP1'] 36543 14705 GVGTSLLSTL True PC9_epitope_Rep5 946.53351171458 946.5329649679301 61.567 1 -0.4478480162819537 0.1245524555833277 0.9173033722615723 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3'] 39823 12173 HNIKLFVL True NCI_RA007_Epitope_Rep4 982.59638675466 982.59528993586 53.821 2 -0.44787842563954 0.1245524555833277 0.9173298511428428 ['SLCO2B1|p.I622Sfs*10|1|0.47|ENSG00000137491|chr11:75203340-75203340|C/-|frameshift_variant', 'nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1', 'SLCO2B1|p.S330Lfs*15|1|0.5|ENSG00000137491|chr11:75188148-75188148|C/-|frameshift_variant'] 62889 7177 LLNKSGPV True NCI_RA007_Epitope_Rep5 826.4912529797799 826.49014993586 34.283 2 -0.44797267130028673 0.12456724030196072 0.9174118683638917 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 13490 8630 DNIYRQPP True H1975_Epitope_Rep1 1001.4930438849299 1001.49194993586 38.123 2 -0.4481609034065105 0.12458839223897736 0.9175754638733138 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant'] 87269 11432 QPNSGLLQA True PC9_epitope_Rep4 926.4821448480599 926.48104993586 51.741 2 -0.44819503488858903 0.12458839223897736 0.9176050975285718 ['ZCCHC17-SERINC2|1|fusion', 'ENST00000491976.1_1_1:31888748-31907043:+|nuORF', 'ENSG00000168528|ENST00000373709|SERINC2', 'nc|ENSG00000168528|Q96SA4-3|SERINC2', 'nc|ENSG00000168528|Q96SA4-2|SERINC2', 'nc|ENSG00000168528|Q96SA4-4|SERINC2'] 60540 7886 LHDLYWQAMK True NCI_RA007_Epitope_Rep3 1303.63832821963 1303.6372299358602 38.135 2 -0.448225967377501 0.12458839223897736 0.9176319456269819 ['ENSG00000132382|ENST00000254718|MYBBP1A', 'nc|ENSG00000132382|Q9BQG0-2|MYBBP1A', 'ENST00000574934.5_1_17:4442712-4445225:-|nuORF', 'ENST00000574547.5_1_17:4442712-4447986:-|nuORF'] 129851 18798 VRRRRGAPGR True NCI_RA007_Epitope_Rep4 1179.7173387893897 1179.71624993586 81.323 2 -0.448226366253445 0.12458839223897736 0.9176322917840233 ['ENST00000444380.5_1_2:85828554-85829758:-|nuORF', 'ENST00000306353.7_2_2:85828206-85829758:-|nuORF'] 60087 11377 LGLREHTL True PC9_epitope_Rep4 937.5345147740901 937.53340993586 51.535 2 -0.4482281442093025 0.12458839223897736 0.9176338347341805 ['ENST00000354485.5_1_9:732324-732786:+|nuORF'] 121570 16195 VFDYEAAG True PC9_epitope_Rep5 870.3759484440199 870.3753949679301 67.285 1 -0.44823757604492775 0.12458839223897736 0.9176420194663227 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant'] 86618 18277 QLERRRGY True PC9_epitope_Rep1 1076.5839245779998 1076.5828299358602 75.091 2 -0.4482949046861613 0.12461585221708149 0.9176917524745727 ['ENST00000528536.1_1_11:407254-407829:-|nuORF', 'ENST00000527295.5_1_11:407027-408122:-|nuORF', 'ENSG00000185187|ENST00000431843|SIGIRR', 'nc|ENSG00000185187|Q6IA17-2|SIGIRR'] 103832 10610 SPYHYRLDW True H1975_Epitope_Rep3 1235.5723568347898 1235.5712499358601 45.88 2 -0.4482964009341351 0.12461585221708149 0.9176930501241655 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 121590 13507 VFFEQSKSFP True PC9_epitope_Rep1 1214.5971746003 1214.59552490379 56.81 3 -0.4483003079907401 0.12461585221708149 0.9176964385080133 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3'] 113052 9896 TLNMFASMF True PC9_epitope_Rep3 1060.4721744113199 1060.4710699358602 43.021 2 -0.4483217194769132 0.1246222162189542 0.91771500536269 ['AGTR2|p.I132M|1|0.04|ENSG00000180772|chrX:116172676-116172676|T/G|missense_variant'] 64628 20064 LPTEPLTAE True PC9_epitope_Rep4 969.5018772331299 969.50132496793 85.312 1 -0.44832299215611526 0.1246222162189542 0.9177161088425867 ['ENST00000441363.1_1_6:74009094-74009619:+|nuORF'] 116956 6191 TVGEQNSW True NCI_RA007_Epitope_Rep4 919.4035601741899 919.40246993586 30.423 2 -0.4483736664456075 0.1246222162189542 0.917760035443442 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 66278 18119 LSFIPNQNQSI True NCI_RA007_Epitope_Rep5 1259.65100107831 1259.64990993586 76.499 2 -0.44837904373511756 0.1246222162189542 0.917764695480407 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|263|1|anti-sense'] 63270 21143 LLSPGSVLVL True PC9_epitope_Rep3 996.62193279616 996.62082993586 86.612 2 -0.44837926735977063 0.1246222162189542 0.9177648892716835 ['ENST00000498749.1_1_2:73114531-73115553:+|nuORF', 'SPR|p.T135Lfs*5|1|0.14|ENSG00000116096|chr2:72888411-72888411|G/-|frameshift_variant', 'ENSG00000116096|ENST00000234454|SPR'] 57363 11424 LEAILDFLDFK True H1975_Epitope_Rep1 1322.7122043525399 1322.7111099358601 48.922 2 -0.4484147212286745 0.1246644493592882 0.9177956081625654 ['MTTP|p.L743Yfs*5|1|0.15|ENSG00000138823|chr4:99618983-99618983|T/-|frameshift_variant', 'ENSG00000138823|ENST00000265517|MTTP'] 114904 9782 TQSKMYHCDIY True H1975_Epitope_Rep3 1387.59005769787 1387.5889699358602 42.65 2 -0.4484649266866858 0.1246644493592882 0.9178390910324595 ['ENSG00000197013|ENST00000358491|ZNF429'] 111 11053 AAATATFAAA True PC9_epitope_Rep5 864.4341320264798 864.43302993586 47.502 2 -0.4484680198553223 0.1246644493592882 0.9178417693500199 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 135096 10892 WEDSCDHKY True H1975_Epitope_Rep2 1181.4447733631698 1181.44366993586 46.925 2 -0.4484989742411454 0.1246644493592882 0.9178685678870637 ['ENST00000471496.5_1_3:183171860-183173034:+|nuORF'] 46474 4380 ISVEMDVTK True NCI_RA007_Epitope_Rep5 1020.5161473982799 1020.51504993586 23.471 2 -0.44856762703449465 0.12467712254992994 0.9179279756602605 ['ENSG00000277586|ENST00000610854|NEFL'] 106603 7653 STPSKALK True H1975_Epitope_Rep3 830.48616759934 830.48506993586 34.42 2 -0.44857137448773454 0.12467712254992994 0.9179312173608746 ['ENSG00000225614|ENST00000565624|ZNF469'] 41141 12764 HVANIVEKL True PC9_epitope_Rep5 1021.59202965021 1021.59092993586 54.105 2 -0.4485731305898489 0.12468768991829293 0.9179327364216734 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 49226 7618 KENSGAQLHV True PC9_epitope_Rep5 1081.5516213902101 1081.5505299358601 34.25 2 -0.4486304457931524 0.12468768991829293 0.9179823012889538 ['ENSG00000077514|ENST00000263681|POLD3', 'nc|ENSG00000077514|Q15054-2|POLD3'] 129852 18961 VRRRRGAPGR True NCI_RA007_Epitope_Rep4 1179.7173387893897 1179.71624993586 82.009 2 -0.4486483137242067 0.12468768991829293 0.9179977475668457 ['ENST00000444380.5_1_2:85828554-85829758:-|nuORF', 'ENST00000306353.7_2_2:85828206-85829758:-|nuORF'] 11481 17711 DFGLDVYLT True H1975_Epitope_Rep2 1041.5018772331298 1041.50137496793 73.446 1 -0.44872242316791455 0.12471934770498168 0.9180617849684357 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 130855 6502 VTCGGGYQLN True H1975_Epitope_Rep3 1010.44913046762 1010.44802993586 29.981 2 -0.4488310019388904 0.12474047566801141 0.9181555255792865 ['ADAMTSL3|p.W763Lfs*4|1|0.29|ENSG00000156218|chr15:83942764-83942765|-/T|frameshift_variant', 'ADAMTSL3|p.V930*|1|0.22|ENSG00000156218|chr15:83982414-83982414|C/-|frameshift_variant', 'ADAMTSL3|p.T1408Nfs*4|1|0.19|ENSG00000156218|chr15:84016446-84016447|-/A|frameshift_variant', 'ENST00000561483.5_1_15:84323016-84694242:+|nuORF', 'nc|ENSG00000156218|P82987-2|ADAMTSL3', 'ENSG00000156218|ENST00000286744|ADAMTSL3'] 33434 7618 GLAGPHLVP True H1975_Epitope_Rep3 859.49158733295 859.49048993586 34.283 2 -0.44883249568626155 0.12474047566801141 0.9181568145174658 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P1343Lfs*68|1|0.26|ENSG00000198753|chrX:153774974-153774974|C/-|frameshift_variant'] 49495 15810 KFFRWVRRAWQ True H1975_Epitope_Rep1 1578.86841969718 1578.8673299358602 66.119 2 -0.4489236289169838 0.12474047566801141 0.918235417568081 ['ENSG00000185955|ENST00000332375|SPACDR'] 127571 11338 VNSYFDSFL True NCI_RA007_Epitope_Rep2 1090.49712620586 1090.4960299358602 48.691 2 -0.4489438309893838 0.12474047566801141 0.9182528327105878 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 84710 9935 QDNENVVNEY True H1975_Epitope_Rep2 1222.5102100707 1222.5091099358601 43.204 2 -0.4489766131219386 0.12474047566801141 0.9182810852779367 ['CON__P02676'] 43251 7576 IFNRWYPEVNR True NCI_RA007_Epitope_Rep2 1492.7575318355198 1492.75588490379 34.095 3 -0.44898127050752523 0.12474047566801141 0.9182850984228513 ['RHOD|p.H117R|1|0.34|ENSG00000173156|chr11:67070444-67070444|A/G|missense_variant'] 9456 9181 AVVGRHEARR True PC9_epitope_Rep2 1149.64792181689 1149.64627490379 40.655 3 -0.4490602068259566 0.12477212882317197 0.9183530884071671 ['ENST00000546324.1_1_11:73018936-73020108:-|nuORF'] 68793 7451 LTLLSSPPSA True H1975_Epitope_Rep3 984.54916177872 984.54806993586 33.639 2 -0.4492019667145055 0.12483753903282978 0.918475060118765 ['ENST00000265354.5_1_6:43147153-43147468:+|nuORF'] 33754 18303 GLKIGDTV True PC9_epitope_Rep3 801.45961849833 801.45852993586 75.609 2 -0.4492356776567889 0.12485020338582545 0.9185040407431554 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 122390 5984 VGDPGQRTL True PC9_epitope_Rep5 941.49304388493 941.49194993586 28.013 2 -0.44924709377830774 0.12485020338582545 0.9185138528059458 ['nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'nc|ENSG00000117713|O14497-3|ARID1A'] 55131 8986 LAADPSHP True PC9_epitope_Rep3 806.3922672145 806.39116993586 39.51 2 -0.4494039285550254 0.12493248717256279 0.9186485407020302 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 123832 5666 VGRNASDL True NCI_RA007_Epitope_Rep5 830.4246299719399 830.42352993586 28.482 2 -0.4494815291308777 0.12496413441577073 0.9187151069376795 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 47468 11090 IVPDAVQVH True PC9_epitope_Rep4 976.5341804209199 976.53308993586 50.433 2 -0.44952646891864934 0.1249789029535865 0.9187536334089036 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant', 'KMT2C|p.L732Ffs*5|1|0.12|ENSG00000055609|chr7:152248240-152248240|G/-|frameshift_variant', 'KMT2C|p.G903*|1|0.04|ENSG00000055609|chr7:152235879-152235880|-/TA|frameshift_variant', 'KMT2C|p.N1398Hfs*15|1|0.2|ENSG00000055609|chr7:152199359-152199360|TT/-|frameshift_variant'] 46499 14305 ISVRALSIVL True PC9_epitope_Rep6 1069.68593003505 1069.68482993586 66.922 2 -0.4495872141403728 0.1250105483451756 0.9188056827006295 ['LDLR|p.S785I|1|0.42|ENSG00000130164|chr19:11128050-11128050|G/T|missense_variant'] 16694 6163 EERQQWESRER True NCI_RA007_Epitope_Rep1 1531.7127664710695 1531.71112490379 28.009 3 -0.449711123466806 0.12502320557608898 0.9189117573157428 ['ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 54311 7854 KYDCFLHP True PC9_epitope_Rep1 1021.46913763621 1021.46804993586 35.037 2 -0.4497653725710979 0.12502320557608898 0.9189581572570461 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000498186.5_1_7:148514900-148581332:-|nuORF', 'ENST00000591330.5_1_17:40855746-40879722:-|nuORF', 'ENST00000585912.5_1_17:40855746-40880959:-|nuORF', 'ENST00000586103.5_1_17:40855746-40880959:-|nuORF', 'ENST00000483012.1_1_7:148516133-148534012:-|nuORF'] 64148 11249 LPEVSGEY True H1975_Epitope_Rep3 892.4178132559998 892.41726496793 48.372 1 -0.4497758032170781 0.12505484861781482 0.9189670758595365 ['ENST00000595146.1_1_19:58721292-58721499:+|nuORF'] 132254 10791 VTVQHAAL True PC9_epitope_Rep3 837.4708518883699 837.46974993586 46.471 2 -0.44980620778298014 0.12506539311811263 0.9189930676610075 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 122430 7692 VGDVFRGG True PC9_epitope_Rep6 805.4082516318099 805.40714993586 38.914 2 -0.4498160867371409 0.12506539311811263 0.9190015111441946 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 82122 11711 PNEKTLTG True PC9_epitope_Rep2 858.44469671018 858.44358993586 50.378 2 -0.4498162581887868 0.12506539311811263 0.9190016576755741 ['nc|ENSG00000186075|Q6X784-2|ZPBP2', 'ENSG00000186075|ENST00000348931|ZPBP2'] 107478 14287 SVMPETEEV True PC9_epitope_Rep3 1019.4481274081099 1019.4475749679301 60.043 1 -0.4499583775345196 0.1251307840291606 0.9191230341346754 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 141220 9262 YTAHVGYSMY True H1975_Epitope_Rep2 1190.50664534374 1190.50554993586 40.584 2 -0.4500012250322716 0.12516242258559881 0.9191595940885832 ['ENSG00000163132|ENST00000382723|MSX1'] 22097 11395 ESPQSLLGGPP True H1975_Epitope_Rep2 1080.5451390274397 1080.5440499358601 48.88 2 -0.45002603512121847 0.12517718528518393 0.9191807563160528 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3', 'SALL3|p.L652Cfs*2|1|0.52|ENSG00000256463|chr18:78993939-78993939|G/-|frameshift_variant'] 101460 8258 SLLADHDQLAP True NCI_RA007_Epitope_Rep5 1178.5931518490202 1178.5920499358601 38.443 2 -0.45006771260902556 0.12522569649516546 0.9192162940561525 ['nc|ENSG00000164053|Q8WXE1-5|ATRIP', 'nc|ENSG00000164053|Q8WXE1-3|ATRIP', 'nc|ENSG00000164053|Q8WXE1-2|ATRIP', 'ENSG00000164053|ENST00000320211|ATRIP'] 122098 20638 VGAAVTEQELL True PC9_epitope_Rep2 1128.60265390356 1128.60154993586 84.818 2 -0.4501347536718475 0.12526997840172785 0.9192734277092635 ['ENSG00000175970|ENST00000344651|UNC119B', 'ENST00000539658.1_1_12:121148334-121149523:+|nuORF'] 76413 17550 NQDKNFAFL True PC9_epitope_Rep2 1095.53490869691 1095.53380993586 72.778 2 -0.4501592097488548 0.12526997840172785 0.9192942600429649 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 101826 10418 SLPGCSDYAQV True PC9_epitope_Rep5 1138.49647458286 1138.49536993586 45.058 2 -0.4501635369131358 0.12526997840172785 0.9192979455014741 ['ENSG00000187033|ENST00000335556|SAMD7'] 75736 22663 NLLDSFHCWQL True PC9_epitope_Rep2 1374.63905649562 1374.6379499358602 92.669 2 -0.45036806242752897 0.12535223150257319 0.9194719567164924 ['ENST00000498648.5_1_2:202339356-202340375:+|nuORF'] 141998 6028 YVKDACRMQK True NCI_RA007_Epitope_Rep2 1240.60564819236 1240.60399490379 28.057 3 -0.4504459828350259 0.12536698950494382 0.9195381567894734 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A', 'ENST00000507080.5_1_4:176556058-176562011:-|nuORF'] 111754 20675 TIILDKLEKP True PC9_epitope_Rep2 1168.70672504928 1168.70562993586 84.962 2 -0.45048374608528124 0.12537751607079586 0.9195702210020171 ['ENSG00000160161|ENST00000291495|CILP2'] 10015 9128 AYQSRLSM-[Oxidation] True H1975_Epitope_Rep1 970.4542162285 970.4536649679301 40.016 1 -0.4504839832629502 0.12537751607079586 0.919570422346981 ['ENSG00000187003|ENST00000333999|ACTL7A'] 98321 5813 SEVVMIQEWYK True H1975_Epitope_Rep3 1410.6853379817 1410.68368490379 27.382 3 -0.4505063242456915 0.12537751607079586 0.9195893858759946 ['ASPM|p.G2791V|1|0.26|ENSG00000066279|chr1:197100879-197100879|C/A|missense_variant'] 9966 17071 AYPCGDMNSF True PC9_epitope_Rep3 1103.40521705031 1103.40410993586 70.816 2 -0.4505492820808166 0.12540279722639314 0.9196258372821395 ['ENSG00000166035|ENST00000299022|LIPC'] 455 16167 AALQELLSK True PC9_epitope_Rep3 971.5651461960299 971.56404993586 67.327 2 -0.45059272086296215 0.12540279722639314 0.9196626804889227 ['ENSG00000118181|ENST00000527673|RPS25'] 1772 4255 AEGVEAGRTEP True H1975_Epitope_Rep3 1114.5254662120199 1114.52436993586 21.483 2 -0.4506112632724266 0.12540279722639314 0.9196784024938316 ['ENST00000405260.5_1_2:242089625-242089673:-|nuORF'] 116108 8137 TSRVTDSSSKV True NCI_RA007_Epitope_Rep3 1165.59388012501 1165.59278993586 39.115 2 -0.45061905021127735 0.12540279722639314 0.9196850041034502 ['ENST00000506216.5_1_4:5749932-5890196:-|nuORF'] 68754 15429 LTLEETHSI True PC9_epitope_Rep5 1041.53423999057 1041.5331499358601 64.357 2 -0.45075773361723764 0.12545129399061983 0.919802488562525 ['nc|ENSG00000184887|Q96KE9-2|BTBD6', 'nc|ENSG00000184887|Q96KE9-1|BTBD6', 'ENSG00000184887|ENST00000392554|BTBD6'] 97818 16906 SELLCYFIII True PC9_epitope_Rep1 1212.6464332918401 1212.6453299358602 69.853 2 -0.4508526837624456 0.12548080167352724 0.9198828278448006 ['ENSG00000103335|ENST00000301015|PIEZO1'] 131735 9674 VTPHHQRR True PC9_epitope_Rep1 1029.55804418333 1029.55694993586 42.068 2 -0.4508668840668961 0.12548080167352724 0.9198948362276611 ['ENST00000488701.1_1_12:7168132-7170034:+|nuORF'] 21316 11515 ERERLVTTAL True PC9_epitope_Rep3 1186.6669854956199 1186.6653449037901 49.296 3 -0.4509469343424125 0.1255124247178501 0.9199624970468694 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 120868 10405 VEMMHMAAP True PC9_epitope_Rep2 1015.42892970035 1015.42782993586 45.346 2 -0.45101690762884833 0.12554192884495352 0.9200215943631661 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 52395 19424 KKMEKKKLLNW True NCI_RA007_Epitope_Rep5 1444.8588260999197 1444.85772993586 81.602 2 -0.45102374415250185 0.12554192884495352 0.9200273659722337 ['ENST00000269141.7_1_18:25531022-25531103:-|nuORF'] 126820 9992 VLPSSTNY True PC9_epitope_Rep1 879.43379767331 879.43270993586 43.299 2 -0.45106908253078337 0.12555244424951925 0.9200656316366893 ['nc|ENSG00000114487|Q86VD1-2|MORC1', 'ENSG00000114487|ENST00000232603|MORC1'] 81253 15264 PKPDVVVQVSI True PC9_epitope_Rep5 1179.6863239578697 1179.6852299358602 63.723 2 -0.45107749679544695 0.12555244424951925 0.9200727312950725 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 85274 17122 QEQLLENI True PC9_epitope_Rep5 985.5080252427299 985.50692993586 70.88 2 -0.45108422468047554 0.12555244424951925 0.9200784075965414 ['ENSG00000185122|ENST00000528838|HSF1', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000532338.5_1_8:145533073-145533583:+|nuORF'] 91809 23400 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 96.472 2 -0.4510941153679423 0.12556507658052762 0.9200867516218416 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 46148 7518 ISLERQVL True PC9_epitope_Rep2 956.5654805491998 956.56438993586 34.285 2 -0.4511163470912831 0.12556507658052762 0.9201055036929712 ['nc|ENSG00000117543|Q9H2P9-4|DPH5'] 76268 6212 NPKEFYHEV True PC9_epitope_Rep6 1161.54547338061 1161.54382490379 32.357 3 -0.45115577650563216 0.12557558992696544 0.9201387509741874 ['ENSG00000174231|ENST00000304992|PRPF8'] 97091 11528 SDGVAVLKV True PC9_epitope_Rep1 886.5123823471799 886.51128993586 49.222 2 -0.4511955757619807 0.12557558992696544 0.9201722961634048 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF'] 45987 13836 ISFDLPEAFL True PC9_epitope_Rep4 1150.5910265907 1150.58992993586 61.119 2 -0.4512079496609294 0.12557558992696544 0.920182722766201 ['ENST00000408957.4_1_2:233414953-233415175:-|nuORF'] 69151 11770 LTRSFYLEPM True H1975_Epitope_Rep3 1255.62709482959 1255.6259899358602 50.417 2 -0.45134474775949157 0.1256746727836999 0.920297902269279 ['ASCL3|p.R136Kfs*8|1|0.17|ENSG00000176009|chr11:8937755-8937756|-/T|frameshift_variant', 'ENSG00000176009|ENST00000531618|ASCL3'] 13241 8844 DLSSKVWN True H1975_Epitope_Rep1 947.47124581119 947.47014993586 38.94 2 -0.45141466901128513 0.1257041659639062 0.9203567094214548 ['nc|ENSG00000109111|Q7KZ85-2|SUPT6H'] 126204 14943 VLGCNNFRVI True PC9_epitope_Rep5 1133.60154878809 1133.59990490379 62.482 3 -0.4514253093386239 0.1257041659639062 0.9203656546328977 ['nc|ENSG00000116984|Q99707-2|MTR', 'ENSG00000116984|ENST00000366577|MTR'] 126421 21368 VLKKKKKKKK True PC9_epitope_Rep5 1254.92274668582 1254.9211049037901 87.252 3 -0.45146026031561354 0.12573577777402978 0.9203950304466217 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 25910 11757 FFPPGAPP True PC9_epitope_Rep2 828.4170254103599 828.41592993586 50.557 2 -0.45151776278428124 0.12575466288913623 0.9204433367474829 ['nc|ENSG00000145216|Q6UN15-4|FIP1L1', 'nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1', 'ENST00000513008.5_1_4:54292015-54325613:+|nuORF', 'ENST00000513975.5_1_4:54244032-54306933:+|nuORF', 'ENSG00000145216|ENST00000337488|FIP1L1', 'ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 127063 20932 VLSSQLLIL True PC9_epitope_Rep5 984.6219327961599 984.62082993586 85.572 2 -0.45156145509209533 0.12575466288913623 0.9204800217358335 ['ENST00000254508.6_1_3:13357788-13358088:-|nuORF'] 407 13708 AALEQLREKLE True H1975_Epitope_Rep3 1298.7194149913 1298.7183099358601 58.024 2 -0.45162182170458093 0.12575466288913623 0.9205306787029903 ['ENSG00000116017|ENST00000263620|ARID3A'] 23230 7996 EVNATLGR True NCI_RA007_Epitope_Rep1 858.4559301002199 858.4553849679301 35.095 1 -0.45162900091119085 0.12575466288913623 0.9205367009995782 ['ZNF862|p.I1034Sfs*13|1|0.16|ENSG00000106479|chr7:149862257-149862257|C/-|frameshift_variant', 'ENSG00000106479|ENST00000223210|ZNF862'] 12679 9633 DLDRGPSTL True PC9_epitope_Rep3 972.48762415132 972.48652993586 42.003 2 -0.4516370191631283 0.12575466288913623 0.9205434265850667 ['TMEM200A|p.L478*|1|0.13|ENSG00000164484|chr6:130441851-130441851|T/-|frameshift_variant', 'ENSG00000164484|ENST00000296978|TMEM200A'] 39673 9817 HLQYKWNEK True H1975_Epitope_Rep3 1244.6302060640799 1244.62855490379 42.788 3 -0.4516479078398132 0.12575466288913623 0.9205525589148276 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 6609 20003 APVTQIGFEAP True PC9_epitope_Rep3 1128.5815245361598 1128.5804299358601 82.187 2 -0.45171264516414733 0.12575466288913623 0.920606832108348 ['nc|ENSG00000147573|Q9BYV6-2|TRIM55'] 98322 3877 SEVWKKRKKMG True NCI_RA007_Epitope_Rep3 1375.7758247519498 1375.77418490379 21.519 3 -0.451727671975315 0.12578626958296094 0.920619424602161 ['ENST00000266735.9_1_12:96259790-96259841:+|nuORF'] 97656 11182 SEGLAQLTS True PC9_epitope_Rep3 904.45017601344 904.44962496793 48.016 1 -0.4518220824763515 0.12588320601676195 0.9206984942784296 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 121189 22252 VESIRRFP True PC9_epitope_Rep3 1002.5610638750999 1002.55996993586 90.878 2 -0.4518554566068763 0.12588320601676195 0.9207264262229935 ['ENSG00000110871|ENST00000288532|COQ5'] 41815 6518 IATPSFVP True PC9_epitope_Rep2 830.4538048419 830.45270993586 30.488 2 -0.4519099142769306 0.1258958231455407 0.9207719821446732 ['ENSG00000156049|ENST00000341700|GNA14'] 58328 17597 LEMNNNKI True PC9_epitope_Rep3 974.48551597634 974.48440993586 72.874 2 -0.45192453313604486 0.1258958231455407 0.9207842068261691 ['nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L', 'ENSG00000157060|ENST00000367547|SHCBP1L'] 83563 6663 PVAEQIERAL True PC9_epitope_Rep2 1124.61897267404 1124.61733490379 31.034 3 -0.45195368283108556 0.1259084394233201 0.9208085768271318 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 42899 4697 IERLDRFLCDP True H1975_Epitope_Rep3 1375.6918203444698 1375.69018490379 23.192 3 -0.4519539858563973 0.1259084394233201 0.9208088301249259 ['MYOF|p.R1401L|1|0.31|ENSG00000138119|chr10:93347664-93347664|C/A|missense_variant'] 39265 9122 HIKRHYHKKFW True NCI_RA007_Epitope_Rep2 1578.86841969718 1578.86677490379 40.088 3 -0.4519937196382022 0.12592317809327894 0.9208420362744255 ['ENSG00000115339|ENST00000392701|GALNT3', 'nc|ENSG00000115339|Q14435-2|GALNT3'] 92535 26089 RMGPPVGG True H1975_Epitope_Rep1 769.3904933926899 769.3899449679301 108.32 1 -0.4520623837832595 0.1259863762055709 0.9208993863789189 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 10986 19562 DALMLKSP True PC9_epitope_Rep3 873.46298962661 873.46188993586 80.48 2 -0.45209206482472775 0.1259863762055709 0.9209241635790487 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 91126 14037 RFVEKYTEL True PC9_epitope_Rep3 1183.62372370131 1183.62262993586 59.085 2 -0.4521086722464898 0.1259904912836767 0.9209380236812523 ['ENSG00000181610|ENST00000313608|MRPS23'] 97735 6051 SEILESLGSP True H1975_Epitope_Rep3 1030.51825557326 1030.51714993586 28.288 2 -0.45211219975162886 0.1259904912836767 0.9209409673198825 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'CFAP54|p.L1793Gfs*13|1|0.13|ENSG00000188596|chr12:96658260-96658285|CAGCTTCTGCTGAGAATACAGAAGTT/-|frameshift_variant'] 59573 12288 LFVGAEQLT True PC9_epitope_Rep4 976.5229470308799 976.52184993586 55.082 2 -0.45216591055939165 0.1259904912836767 0.9209857741026138 ['ENSG00000157445|ENST00000474759|CACNA2D3', 'nc|ENSG00000157445|Q8IZS8-2|CACNA2D3'] 10928 16056 DAEERCEQLIK True PC9_epitope_Rep6 1332.6343650379997 1332.63271490379 74.082 3 -0.45219233084473404 0.1259904912836767 0.9210078049284716 ['ENSG00000133020|ENST00000403437|MYH8', 'MYH8|p.A1159Qfs*8|1|0.3|ENSG00000133020|chr17:10400650-10400650|C/-|frameshift_variant'] 126085 11901 VLELEHSEPPI True NCI_RA007_Epitope_Rep2 1261.6554177524101 1261.65432993586 50.897 2 -0.4521989283931095 0.1259904912836767 0.9210133053757411 ['ASTN1|p.W1043L|1|0.27|ENSG00000152092|chr1:176884437-176884437|C/A|missense_variant'] 26755 15240 FKDRHWLFTEF True PC9_epitope_Rep1 1524.7513838259194 1524.74974490379 63.44 3 -0.45223802695886484 0.1259904912836767 0.921045894181398 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A'] 76359 19991 NPYTLYTF True PC9_epitope_Rep4 1017.4807478657299 1017.4801749679301 85.029 1 -0.45228031676865293 0.12602208547584928 0.9210811273089382 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 92770 14684 RPADVIFAT True PC9_epitope_Rep5 988.5341804209199 988.5336349679301 61.487 1 -0.4523414728604353 0.12606203641267702 0.9211320499209493 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 67739 13625 LSYFLISPP True PC9_epitope_Rep5 1035.5640835668698 1035.56298993586 57.431 2 -0.45235053975246947 0.12606203641267702 0.9211395967278942 ['ENSG00000128536|ENST00000317716|CDHR3'] 135014 11726 WDANDMVI True PC9_epitope_Rep6 962.41676771018 962.41566993586 56.252 2 -0.4523565157850827 0.12606203641267702 0.9211445704571583 ['MTUS1|p.A991Hfs*50|1|0.46|ENSG00000129422|chr8:17656001-17656001|T/-|frameshift_variant', 'MTUS1|p.I571Lfs*38|1|0.19|ENSG00000129422|chr8:17754097-17754097|T/-|frameshift_variant', 'nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'MTUS1-FGL1|3|fusion', 'MTUS1-FGL1|2|fusion', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 54707 11049 KYLYVDKNF True PC9_epitope_Rep4 1188.6179100448796 1188.6168099358601 50.276 2 -0.4523699818318316 0.12606203641267702 0.9211557767834029 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 75410 19841 NIVEVLRQI True PC9_epitope_Rep4 1082.64479349906 1082.64368993586 84.449 2 -0.4523831759141885 0.12606203641267702 0.9211667551868299 ['ENST00000552690.1_1_12:106715380-106717765:+|nuORF', 'nc|ENSG00000166046|Q8N4U5-2|TCP11L2', 'TCP11L2|p.S294Tfs*2|1|0.06|ENSG00000166046|chr12:106335747-106335747|G/-|frameshift_variant', 'ENSG00000166046|ENST00000299045|TCP11L2'] 121692 18226 VFLDFFTYAP True PC9_epitope_Rep6 1218.59611197114 1218.5950099358602 82.748 2 -0.45248673392079564 0.12611048363985772 0.9212528678173489 ['ENSG00000080608|ENST00000397885|PUM3'] 33049 21779 GILGNGLVI True PC9_epitope_Rep1 854.5225531080599 854.52200496793 88.601 1 -0.4525960627508501 0.12615892923367386 0.9213436733120511 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 38439 4233 HENNNGQAAF True NCI_RA007_Epitope_Rep3 1100.4635346618 1100.4624299358602 23.322 2 -0.4526300903107328 0.1261715326006338 0.9213719134585616 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 24302 21920 EYTSILHLF True PC9_epitope_Rep5 1121.57571087973 1121.57460993586 89.357 2 -0.452677422246726 0.1261715326006338 0.9214111776286863 ['ENSG00000198799|ENST00000361127|LRIG2'] 125565 24378 VKKKKKKRQRY True NCI_RA007_Epitope_Rep5 1488.9728847657198 1488.97123490379 101.24 3 -0.4527126118477281 0.12618200819188566 0.9214403558992226 ['ENST00000358951.6_1_1:220323782-220323881:-|nuORF'] 72883 13973 MPSAPVNTT True PC9_epitope_Rep6 916.4324177743201 916.43132993586 65.606 2 -0.45274297742513464 0.12618200819188566 0.9214655251416979 ['NBN|p.S537Vfs*9|1|0.31|ENSG00000104320|chr8:89953481-89953481|G/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 89433 6741 QYEDLKQPM True NCI_RA007_Epitope_Rep1 1150.5328600915798 1150.5317699358602 30.231 2 -0.45275661839013387 0.12618200819188566 0.921476829046701 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 84274 6619 PYNTETLD True PC9_epitope_Rep4 951.41854153199 951.41744993586 32.62 2 -0.45283933552544836 0.12621146488226667 0.9215453381564247 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1'] 29737 20023 FVNDIFERI True PC9_epitope_Rep4 1151.59750895347 1151.59640993586 85.155 2 -0.4528609699118948 0.12621146488226667 0.9215632461716122 ['ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 83961 5419 PVRTCAER True NCI_RA007_Epitope_Rep5 930.4705346185399 930.46942993586 27.533 2 -0.45293806654205415 0.12622619248272374 0.9216270286559614 ['ENST00000522017.5_1_X:46382546-46401540:-|nuORF'] 83394 17796 PTKERRQKPV True H1975_Epitope_Rep2 1237.72550343125 1237.7244099358602 73.773 2 -0.45328541540579026 0.1263757563499688 0.9219137170931682 ['CLIP3|p.Q35K|1|0.19|ENSG00000105270|chr19:36032255-36032255|G/T|missense_variant'] 98269 13679 SEVFHVNISL True PC9_epitope_Rep6 1143.59242357303 1143.5913299358601 64.401 2 -0.4533478003838489 0.1263862203795463 0.9219650899222147 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant'] 40265 14212 HQLESILAM-[Oxidation] True PC9_epitope_Rep1 1056.5273811687598 1056.5262899358602 59.489 2 -0.45339296444481725 0.1263862203795463 0.9220022593126409 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 46006 15890 ISFVKHML True PC9_epitope_Rep1 973.5419086536499 973.54080993586 65.931 2 -0.4534029678107802 0.1263862203795463 0.9220104894028662 ['ENST00000520864.5_1_5:170395310-170632776:+|nuORF', 'ENST00000389118.8_1_5:170395310-170711609:+|nuORF', 'ENST00000522533.5_1_5:170395310-170725859:+|nuORF', 'ENST00000519949.5_1_5:170395310-170725859:+|nuORF'] 15246 8608 EAEPCPELHTE True H1975_Epitope_Rep1 1253.52341760669 1253.5223299358602 38.038 2 -0.4534713570002462 0.12641566671160848 0.9220667306939795 ['WDR91|p.D718Pfs*28|1|0.1|ENSG00000105875|chr7:135186243-135186244|-/CACGGTGACCACAGGGG|frameshift_variant', 'nc|ENSG00000105875|A4D1P6-2|WDR91', 'WDR91|p.E606Rfs*77|1|0.26|ENSG00000105875|chr7:135188498-135188498|C/-|frameshift_variant', 'ENSG00000105875|ENST00000354475|WDR91'] 300 9901 AAHEAALL True PC9_epitope_Rep1 794.42865272322 794.42754993586 42.942 2 -0.45348038036618293 0.12641566671160848 0.9220741480309114 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN'] 93847 4994 RRDNTFYYYNK True NCI_RA007_Epitope_Rep1 1538.7266256300597 1538.72497490379 23.509 3 -0.45357435740379815 0.12645983248790846 0.9221513538803073 ['ENSG00000197889|ENST00000407572|MEIG1'] 117350 23069 TVPDLLLPLV True PC9_epitope_Rep4 1078.66379760814 1078.6627099358602 96.958 2 -0.4536256912522743 0.12645983248790846 0.9221934922471416 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 109188 7377 TAPESQLHLPG True H1975_Epitope_Rep2 1148.5825871653199 1148.5814899358602 33.316 2 -0.45363999922720577 0.12645983248790846 0.9222052328840699 ['ENST00000380466.6_1_17:7530728-7531181:-|nuORF'] 19794 7283 ELSKEECCSTG True H1975_Epitope_Rep3 1184.4689395056798 1184.4678499358602 32.988 2 -0.45369944660194705 0.12649140546006066 0.9222539931181157 ['nc|ENSG00000134363|P19883-2|FST', 'ENSG00000134363|ENST00000256759|FST'] 56094 13000 LATRETPAAP True PC9_epitope_Rep3 1025.5505587610498 1025.54946993586 55.031 2 -0.45376307779404906 0.12653130002527593 0.922306148818996 ['ENST00000261211.7_1_12:96728621-96793984:-|nuORF'] 66064 16740 LSEHQQYVI True PC9_epitope_Rep1 1115.5611234447501 1115.56002993586 69.219 2 -0.4537915200383936 0.12653130002527593 0.9223294495658435 ['ENSG00000164850|ENST00000397088|GPER1'] 119791 11815 VCMRAALLL True PC9_epitope_Rep4 988.5561788187998 988.55508993586 53.214 2 -0.45381437070520697 0.12653130002527593 0.922348164098141 ['ENST00000324822.15_1_17:7293318-7293747:-|nuORF'] 70402 8771 LVTHQVPAEA True NCI_RA007_Epitope_Rep2 1063.56620882519 1063.5651099358602 38.764 2 -0.4538605020139307 0.12653130002527593 0.9223859305733354 ['ENST00000301935.9_1_11:62446385-62446535:-|nuORF'] 83685 13505 PVFAKTVSI True NCI_RA007_Epitope_Rep3 960.5644179200399 960.56332993586 60.412 2 -0.45386756615813084 0.12653130002527593 0.9223917120595321 ['nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'ENSG00000181631|ENST00000325602|P2RY13'] 102347 4966 SLSTSKSPP True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 24.185 2 -0.4538856870430866 0.12654601826576348 0.922406540565906 ['ENSG00000275023|ENST00000621332|MLLT6'] 3670 19161 AGQCINPYITV True PC9_epitope_Rep1 1177.58014463717 1177.5790499358602 78.498 2 -0.45392873586384186 0.1265775860616375 0.9224417556523584 ['ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 71477 6516 LYWFSHMK True NCI_RA007_Epitope_Rep1 1110.5320722459398 1110.5309699358602 29.361 2 -0.4539784568024546 0.12659017001128917 0.9224824073181962 ['ENST00000523861.1_1_8:120584407-120592491:-|nuORF'] 67774 4613 LSYRPVAI True NCI_RA007_Epitope_Rep3 917.5334521449298 917.53234993586 25.06 2 -0.45398682422692077 0.12659017001128917 0.9224892462400793 ['PKLR|p.R504Afs*26|1|0.19|ENSG00000143627|chr1:155291864-155291864|G/-|frameshift_variant', 'nc|ENSG00000143627|P30613-2|PKLR', 'ENSG00000143627|ENST00000342741|PKLR'] 112271 10009 TKRPPVLQ True PC9_epitope_Rep4 937.5709002828098 937.56980993586 46.162 2 -0.45403717038169955 0.12662173546756528 0.9225303817894999 ['ENST00000574864.1_1_6:137221518-137222013:-|nuORF'] 14607 5730 DTYYYRRRHRH True H1975_Epitope_Rep1 1621.79743958489 1621.7957849037898 27.109 3 -0.4540540832300103 0.1266279167719653 0.9225441952250036 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 56706 15789 LDLARGDFAQA True PC9_epitope_Rep3 1175.59348620219 1175.5923899358602 65.888 2 -0.4540661104732163 0.1266279167719653 0.9225540167641629 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 23630 19011 EWRRRKEKL True PC9_epitope_Rep1 1299.7523868854298 1299.75073490379 77.914 3 -0.4540722803888195 0.1266279167719653 0.9225590546429858 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L'] 80217 11808 PGAELAELP True H1975_Epitope_Rep2 895.4650978015899 895.46454496793 50.495 1 -0.4540902062269816 0.1266279167719653 0.9225736894973968 ['ENSG00000179598|ENST00000321560|PLD6'] 81437 14201 PLEWIGLI True PC9_epitope_Rep1 939.5429541994698 939.54184993586 59.446 2 -0.4541060608036688 0.1266279167719653 0.9225866308616356 ['ENSG00000112238|ENST00000369215|PRDM13'] 41887 10523 ICNLPNNSL True PC9_epitope_Rep2 986.4855159763401 986.48440993586 45.798 2 -0.45418559662779606 0.12665521075507935 0.9226515170292888 ['ENSG00000204021|ENST00000404190|LIPK', 'LIPK|p.N247Kfs*20|1|0.28|ENSG00000204021|chr10:88737703-88737704|-/A|frameshift_variant'] 11569 15650 DFWLRHRLQWW True PC9_epitope_Rep1 1641.8316998352898 1641.8306099358601 65.019 2 -0.45420332475773173 0.12665521075507935 0.922665971803132 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000580893.5_1_17:62486773-62489133:-|nuORF', 'ENST00000585141.5_1_17:62481823-62493086:-|nuORF'] 33286 7068 GKKSGFVN True NCI_RA007_Epitope_Rep5 835.45520182423 835.45410993586 33.869 2 -0.454225932657851 0.12665521075507935 0.9226844010920108 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 136408 10752 WTSLSLGTW True NCI_RA007_Epitope_Rep1 1049.51819600361 1049.5170899358602 45.817 2 -0.454275611757537 0.126663522118527 0.9227248812952111 ['ENST00000397621.5_1_16:746860-755534:-|nuORF'] 59657 17812 LGAFRRKFI True PC9_epitope_Rep3 1106.6712830304198 1106.6701899358602 73.711 2 -0.454285745183364 0.126663522118527 0.9227331355281351 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 34049 18948 GLVLSLEEQL True PC9_epitope_Rep3 1099.61249031127 1099.6119749679299 78.108 1 -0.45433744822615035 0.126663522118527 0.9227752355994714 ['ENSG00000116830|ENST00000369466|TTF2'] 20506 12310 EPMQQLLDP True PC9_epitope_Rep1 1069.5113963710098 1069.51028993586 52.206 2 -0.4543375581259346 0.126663522118527 0.9227753250606688 ['ENSG00000101463|ENST00000376862|SYNDIG1'] 86059 21480 QHRRNRRRRKP True H1975_Epitope_Rep2 1558.9253744930197 1558.9242699358601 88.876 2 -0.4544034567886472 0.1266760999932619 0.9228289479434307 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 61071 13479 LIGSHPDLSF True PC9_epitope_Rep6 1084.55530978832 1084.5542099358602 63.54 2 -0.4544260050605746 0.1266760999932619 0.9228472865557239 ['ENSG00000140961|ENST00000393306|OSGIN1'] 87375 6531 QPTETPVA True PC9_epitope_Rep1 841.4181476091699 841.41704993586 29.925 2 -0.4544431842590589 0.1266865430289555 0.9228612552896253 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 112056 17059 TITANPWTV True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 70.443 2 -0.4544667610603454 0.1266865430289555 0.9228804215486989 ['ADGRG4|p.R2118W|1|0.28|ENSG00000156920|chrX:136350058-136350058|A/T|missense_variant'] 127212 16738 VLVSVGLLGL True PC9_epitope_Rep2 968.6270181765998 968.62592993586 69.63 2 -0.4544697558951525 0.1266865430289555 0.9228828557642232 ['ENST00000225964.9_1_17:48274384-48275320:-|nuORF'] 75689 14508 NLIFPGVR True PC9_epitope_Rep5 914.5337864980999 914.53268993586 60.805 2 -0.4544960281750998 0.12671596287624853 0.922904206401735 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'ENST00000431478.2_1_6:73100573-73110413:+|nuORF', 'nc|ENSG00000079841|Q86UR5-11|RIMS1', 'nc|ENSG00000176406|Q9UQ26-7|RIMS2', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1'] 118998 11145 VAERVYREI True PC9_epitope_Rep1 1133.61930702721 1133.61766490379 47.753 3 -0.45449757969465177 0.12671596287624853 0.922905467070079 ['ENSG00000197408|ENST00000324071|CYP2B6'] 65584 10136 LRSWWPRWWWA True NCI_RA007_Epitope_Rep4 1628.8153214951599 1628.81422993586 45.846 2 -0.4545024674788134 0.12676435910392453 0.9229094384325601 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 57420 7354 LEATGEVQA True H1975_Epitope_Rep2 916.4501760134398 916.44962496793 33.227 1 -0.4546806154272276 0.12682318860107117 0.9230540324955581 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF'] 61663 20501 LKRRIWRMPLF True NCI_RA007_Epitope_Rep4 1514.9020283245798 1514.9009299358602 88.775 2 -0.454689697543683 0.12682318860107117 0.9230613960487595 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 2952 7261 AFEDIYIEQRR True H1975_Epitope_Rep1 1438.7204776204599 1438.7193899358601 32.939 2 -0.45471554201350245 0.12682318860107117 0.9230823458694078 ['ENSG00000007314|ENST00000435607|SCN4A'] 2844 9676 AEVEERRSWQE True NCI_RA007_Epitope_Rep1 1417.6586056398899 1417.6575099358602 41.636 2 -0.45471906225609143 0.12682318860107117 0.923085198933516 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 66344 17197 LSGARVYVL True PC9_epitope_Rep2 976.5705659296399 976.56946993586 71.407 2 -0.45478068132169214 0.1268526003772568 0.9231351207463291 ['ENST00000316715.8_1_X:13798007-13801499:-|nuORF'] 9368 10198 AVSEGLLGK True H1975_Epitope_Rep3 872.4967322830399 872.49618496793 44.273 1 -0.4548131231769574 0.1268526003772568 0.923161389793997 ['ENSG00000143156|ENST00000367811|NME7', 'nc|ENSG00000143156|Q9Y5B8-2|NME7'] 339 10833 AAIKGNQESVK True PC9_epitope_Rep3 1143.62478633047 1143.62368993586 46.641 2 -0.4548728866451298 0.126865168917781 0.9232097560228482 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 44579 7600 ILPSFSEAP True NCI_RA007_Epitope_Rep2 959.49639792987 959.49530993586 34.185 2 -0.4548910008882061 0.126865168917781 0.9232244091494463 ['ENST00000331134.10_1_17:79525465-79525600:-|nuORF'] 103045 16723 SPFTVGVAA True PC9_epitope_Rep4 847.4439684341899 847.44341496793 72.293 1 -0.45494334109845197 0.1269114179858538 0.9232667313053096 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 16196 8423 EEEEEEEVP True PC9_epitope_Rep1 1117.4298940613298 1117.42878993586 37.235 2 -0.4549532515312243 0.1269114179858538 0.923274741954864 ['ENSG00000139718|ENST00000604567|SETD1B', 'KIF1B|p.W739C|1|0.08|ENSG00000054523|chr1:10321716-10321716|G/T|missense_variant', 'nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 101767 13719 SLNRYFIKV True PC9_epitope_Rep4 1138.6498788795 1138.6482449037899 60.66 3 -0.45499576346014803 0.12691970901252864 0.9233090940659135 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'nc|ENSG00000141568|Q01167-2|FOXK2', 'ENSG00000141568|ENST00000335255|FOXK2'] 5783 5348 APDEKYVAA True PC9_epitope_Rep4 962.4709114580199 962.46980993586 27.289 2 -0.45499602966404434 0.12691970901252864 0.9233093091205717 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 83426 11191 PTLVPQPHVP True H1975_Epitope_Rep3 1083.60767971435 1083.60658993586 48.145 2 -0.4550043458221015 0.12691970901252864 0.9233160270505182 ['ENST00000271332.3_1_1:109805800-109806782:+|nuORF'] 131992 7621 VTSLRPEPP True H1975_Epitope_Rep2 994.5447451046199 994.54364993586 34.267 2 -0.4550102974609162 0.12691970901252864 0.9233208344831343 ['FAM47C|p.S208T|1|0.1|ENSG00000198173|chrX:37009032-37009032|T/A|missense_variant'] 67730 12362 LSYASQNFIP True H1975_Epitope_Rep3 1138.56587447202 1138.56476993586 52.737 2 -0.45506885694263677 0.1269237245327496 0.9233681180856496 ['nc|ENSG00000166454|O43313-2|ATMIN', 'ENSG00000166454|ENST00000299575|ATMIN'] 124113 17482 VGSPPVFIQE True PC9_epitope_Rep1 1071.5600608155898 1071.5589699358602 72.04 2 -0.4550793561878588 0.1269237245327496 0.9233765922419301 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.S1011Vfs*17|1|0.44|ENSG00000143341|chr1:185987523-185987524|-/C|frameshift_variant', 'ENST00000493413.1_1_1:185934944-185947193:+|nuORF', 'ENST00000485744.5_1_1:185931700-185962449:+|nuORF', 'nc|ENSG00000143341|Q96RW7-3|HMCN1', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 20978 8237 EQQLGKEAP True H1975_Epitope_Rep3 998.5032742154598 998.50216993586 36.667 2 -0.45508784998460855 0.1269237245327496 0.923383446999671 ['ENSG00000136040|ENST00000258526|PLXNC1', 'ENST00000549217.5_1_12:94694713-94697836:+|nuORF'] 33978 5903 GLSRNQARSSR True NCI_RA007_Epitope_Rep3 1230.6541293961398 1230.65248490379 30.195 3 -0.4551056773430798 0.1269237245327496 0.9233978320208265 ['ENST00000348165.9_1_7:157000460-157000568:+|nuORF'] 114663 21028 TQERQRLM[Oxidation]QEL True H1975_Epitope_Rep1 1446.7249117583399 1446.7238099358601 87.336 2 -0.4551409368570495 0.1269237245327496 0.9234262743498531 ['FAM184A|p.T730M|1|0.16|ENSG00000111879|chr6:118980250-118980250|G/A|missense_variant'] 139483 24812 YLRMIKRSS True PC9_epitope_Rep2 1152.6437479532399 1152.64210490379 101.13 3 -0.45514742427786975 0.1269237245327496 0.92343150619573 ['ENST00000550201.5_1_12:57929618-57940812:-|nuORF'] 83953 3814 PVRPRLGGYPC True NCI_RA007_Epitope_Rep4 1213.6389969259699 1213.63735490379 20.855 3 -0.4552401338170987 0.12700577528581772 0.923506229359889 ['ENST00000556618.1_3_15:91500516-91500609:+|nuORF'] 78166 4888 NYARGHYTI True NCI_RA007_Epitope_Rep3 1093.5304920228102 1093.52938993586 26.214 2 -0.45526680766358923 0.12704987035727514 0.9235277132430986 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 67915 15144 LTCWYIQKYV True H1975_Epitope_Rep3 1315.6634803383101 1315.6623899358601 63.65 2 -0.45527004361322493 0.12704987035727514 0.9235303191129847 ['ENSG00000274180|ENST00000611551|NATD1'] 4932 18621 ALGALPALTF True PC9_epitope_Rep3 972.56441792004 972.56332993586 76.847 2 -0.4552760920189589 0.12704987035727514 0.9235351895534816 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'ENST00000524486.5_1_11:803168-803522:-|nuORF'] 130983 5256 VTDNGLQK True NCI_RA007_Epitope_Rep4 873.4555957470501 873.45448993586 26.761 2 -0.45529334402702865 0.12706242844636004 0.9235490797252734 ['ENSG00000159399|ENST00000290573|HK2', 'ENST00000472302.1_1_2:75081464-75094914:+|nuORF'] 103483 10848 SPQLDVNL True H1975_Epitope_Rep1 884.46034677432 884.45924993586 46.685 2 -0.45530903104381226 0.12706242844636004 0.9235617074289024 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2'] 6102 14793 APLYQVAAA True PC9_epitope_Rep2 902.4861675993398 902.48506993586 62.165 2 -0.45537737562011493 0.12707498568975387 0.9236166961664611 ['ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 103510 12016 SPREPVNV True PC9_epitope_Rep2 896.4715801643599 896.47048993586 51.536 2 -0.4553835332366738 0.12707498568975387 0.9236216482977412 ['ENST00000275364.7_1_7:2769482-2769623:-|nuORF'] 57947 22509 LEGLGLLDV True PC9_epitope_Rep2 927.52769805815 927.52660993586 92.07 2 -0.45539102780860086 0.1271065169447297 0.9236276751627925 ['ENST00000467496.5_1_X:129474252-129484631:+|nuORF'] 130691 16728 VSTTPLLANSL True PC9_epitope_Rep2 1114.62338934814 1114.6222899358602 69.592 2 -0.45542158300807684 0.12715488215488216 0.9236522410544314 ['ENST00000506130.5_1_5:72853376-72858450:-|nuORF', 'ENST00000515804.1_1_5:72853376-72858706:-|nuORF', 'ENSG00000164331|ENST00000296785|ANKRA2'] 65583 9863 LRSWWPRWWWA True NCI_RA007_Epitope_Rep3 1628.8153214951599 1628.81422993586 45.869 2 -0.45546177811008115 0.1272011043399212 0.9236845438149391 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 94048 18037 RRKRVIRMSF True NCI_RA007_Epitope_Rep1 1347.8033769124697 1347.80173490379 74.299 3 -0.45548566730010137 0.1272011043399212 0.9237037350944823 ['chr19:41500787-41500892|494|20.08|0.0|20.94|-|1|PCAT19,PCAT19|3'] 55332 9170 LAEGGQFLGDP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 40.177 2 -0.4555816750833442 0.1272157971819605 0.9237808080011639 ['ENSG00000142686|ENST00000270815|C1orf216'] 112952 8482 TLLLQHTDP True NCI_RA007_Epitope_Rep1 1036.5553097883198 1036.5542099358602 36.993 2 -0.4556550574977175 0.12726201498190387 0.9238396588212264 ['ENST00000579053.5_1_18:691132-706776:-|nuORF'] 24917 11324 FCFCCFWYCK True NCI_RA007_Epitope_Rep4 1348.4901500579197 1348.48904993586 50.455 2 -0.45566132453393043 0.12726201498190387 0.923844682455091 ['ENST00000555736.1_1_14:65714419-65769374:-|nuORF'] 116526 17125 TTSLRIRIVNF True NCI_RA007_Epitope_Rep2 1318.7721192705 1318.77102993586 71.35 2 -0.45572514139893494 0.1272935393731273 0.9238958165870033 ['ENSG00000185101|ENST00000332826|ANO9', 'nc|ENSG00000185101|A1A5B4-3|ANO9', 'ENST00000528927.5_1_11:431754-441926:-|nuORF'] 84123 18666 PWWQWLKWRRL True PC9_epitope_Rep5 1653.90447085273 1653.9033699358602 76.822 2 -0.45574734851415316 0.1273039438468919 0.9239136012647519 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 127978 11225 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 48.166 2 -0.4557540635401352 0.1273039438468919 0.9239189781033804 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 103812 23907 SPWKARRV True NCI_RA007_Epitope_Rep4 998.5773826455799 998.57628993586 103.69 2 -0.4557558457263869 0.1273039438468919 0.9239204050590666 ['ENST00000373137.2_1_1:36793434-36793755:+|nuORF'] 58787 8282 LESKENTPP True H1975_Epitope_Rep1 1013.50293986229 1013.50184993586 36.79 2 -0.45582245278785344 0.1273186332267295 0.9239737141465966 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 74291 7480 NEKTDKERTFD True NCI_RA007_Epitope_Rep2 1381.6473722498497 1381.6462699358601 33.724 2 -0.45594685684243685 0.12735015401188332 0.9240731680785736 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 44732 8236 ILWHQLFP True NCI_RA007_Epitope_Rep1 1052.58073669052 1052.57962993586 36.034 2 -0.4559527800128013 0.12735412424053721 0.924077899637765 ['ENST00000463255.1_1_3:152175682-152175850:-|nuORF'] 69987 24706 LVLRRRKRRRI True H1975_Epitope_Rep2 1521.0327996836797 1521.0317099358601 101.59 2 -0.4559952592723294 0.12735412424053721 0.9241118232063595 ['ENST00000496567.5_1_9:97782205-97782394:+|nuORF'] 13383 19992 DLYEDELVP True PC9_epitope_Rep5 1091.50227115595 1091.5011699358602 81.954 2 -0.4560308683190059 0.12735412424053721 0.9241402470223707 ['HNRNPR|p.R455Efs*45|1|0.46|ENSG00000125944|chr1:23310994-23310994|C/-|frameshift_variant', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 32741 11623 GHAIQTAGVAE True PC9_epitope_Rep1 1052.5250722892 1052.5239699358601 49.586 2 -0.45610050638022953 0.12735412424053721 0.9241957984689526 ['ENST00000411826.1_1_6:114383905-114384022:-|nuORF'] 56810 17574 LDNIELYWNSY True H1975_Epitope_Rep3 1428.6561460284 1428.65504993586 73.404 2 -0.45610493580145606 0.12735412424053721 0.9241993303260835 ['NDRG2|p.L311Cfs*12|1|0.12|ENSG00000165795|chr14:21018005-21018005|G/-|frameshift_variant', 'nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2', 'ENST00000557416.5_1_14:21486655-21488105:-|nuORF'] 55391 15961 LAEREVASL True PC9_epitope_Rep3 986.5396597241798 986.53856993586 66.54 2 -0.45613363762967557 0.12735412424053721 0.92422221156343 ['ENST00000335020.2_1_6:116360191-116360374:+|nuORF'] 45590 7158 IQVDDSYARK True NCI_RA007_Epitope_Rep2 1193.6040508858898 1193.6029499358601 32.465 2 -0.4562310878641066 0.12736881079807466 0.9242998406129191 ['ENST00000461445.5_1_3:38051483-38071030:-|nuORF', 'ENSG00000187091|ENST00000334661|PLCD1', 'nc|ENSG00000187091|P51178-2|PLCD1'] 33649 6929 GLGLVGGNV True NCI_RA007_Epitope_Rep2 784.44430278736 784.44320993586 31.572 2 -0.456240484189015 0.12740032649489222 0.9243073209429689 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 135013 12415 WDANDMVI True PC9_epitope_Rep4 962.41676771018 962.41566993586 55.559 2 -0.45631823447618447 0.12741501178054526 0.9243691848220127 ['MTUS1|p.A991Hfs*50|1|0.46|ENSG00000129422|chr8:17656001-17656001|T/-|frameshift_variant', 'MTUS1|p.I571Lfs*38|1|0.19|ENSG00000129422|chr8:17754097-17754097|T/-|frameshift_variant', 'nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'MTUS1-FGL1|3|fusion', 'MTUS1-FGL1|2|fusion', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 33811 5608 GLLRQEAVS True PC9_epitope_Rep1 971.5399940773499 971.53888993586 26.398 2 -0.4563617345596201 0.12742755208508633 0.9244037714483211 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 118021 19227 TYEFELWP True PC9_epitope_Rep6 1083.49131254943 1083.49020993586 86.608 2 -0.4563623331581038 0.12742755208508633 0.9244042472635075 ['ENSG00000118492|ENST00000397944|ADGB'] 39424 4899 HKTRMWDRDP True H1975_Epitope_Rep3 1340.6407878311197 1340.63914490379 23.971 3 -0.45639453793434964 0.12745906467192838 0.9244298411985556 ['nc|ENSG00000006625|O75223-4|GGCT'] 122426 9748 VGDVFRGG True PC9_epitope_Rep3 805.4082516318099 805.40714993586 42.45 2 -0.45652877397158215 0.1274905761981691 0.9245364147457885 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 84686 13682 QDLATVSLWQP True NCI_RA007_Epitope_Rep2 1256.6401020414398 1256.63900993586 57.863 2 -0.45658324033367625 0.127522086663862 0.9245796076885109 ['ENST00000305366.7_1_3:149093296-149093356:-|nuORF'] 61230 15688 LIMECESFENI True PC9_epitope_Rep1 1326.5835753350998 1326.58192490379 65.166 3 -0.4565950307577983 0.12753676841786424 0.9245889539828347 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 139389 15144 YLNILSELI True PC9_epitope_Rep2 1076.61176203528 1076.6106699358602 63.51 2 -0.45665379912555143 0.1275514496777559 0.9246355198561313 ['ENST00000315183.11_2_16:24836827-24836932:+|nuORF'] 123967 8448 VGSAGVTVVI True NCI_RA007_Epitope_Rep4 900.5280324113199 900.52692993586 39.311 2 -0.4567084784319121 0.12763129112049673 0.924678815867196 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 58952 14158 LETSLKRPKR True H1975_Epitope_Rep1 1226.7459045226599 1226.74480993586 59.633 2 -0.45670857086281463 0.12763129112049673 0.9246788890312008 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.S1011Vfs*17|1|0.44|ENSG00000143341|chr1:185987523-185987524|-/C|frameshift_variant', 'HMCN1|p.K245Efs*15|1|0.19|ENSG00000143341|chr1:185909445-185909446|-/T|frameshift_variant', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 125689 19153 VKNIKRYRKEL True NCI_RA007_Epitope_Rep4 1445.8830667018099 1445.88196993586 82.819 2 -0.4567298259864321 0.1276459700487969 0.9246957114141025 ['ENSG00000100271|ENST00000266254|TTLL1', 'nc|ENSG00000100271|O95922-4|TTLL1', 'ENST00000439248.5_1_22:43464548-43465849:-|nuORF'] 76192 18572 NNKELINI True PC9_epitope_Rep5 956.5290950404799 956.52798993586 76.461 2 -0.4567583250223922 0.12765850047112667 0.9247182601681743 ['TMEM87B|p.R158I|1|0.27|ENSG00000153214|chr2:112074934-112074934|G/T|missense_variant', 'nc|ENSG00000153214|Q96K49-2|TMEM87B', 'ENSG00000153214|ENST00000283206|TMEM87B'] 127088 7618 VLTDIVAK True H1975_Epitope_Rep3 857.52221875489 857.52112993586 34.283 2 -0.4567949347633693 0.12765850047112667 0.924747214718956 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10', 'ENST00000472652.1_1_2:225702475-225704822:-|nuORF'] 53353 11956 KQQQQLVL True NCI_RA007_Epitope_Rep5 983.5763795860697 983.57528993586 52.645 2 -0.45690985481587726 0.12770468082242487 0.9248380207364498 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 62763 10772 LLLQPHWWLC True H1975_Epitope_Rep2 1307.68488448923 1307.6832449037902 46.464 3 -0.4569450764480744 0.12770468082242487 0.9248658261854508 ['ENST00000592836.5_1_2:179400536-179402981:+|nuORF', 'ENST00000592689.5_1_2:179400536-179404864:+|nuORF'] 112084 15555 TITWRKNGKL True PC9_epitope_Rep1 1215.7087907379498 1215.70714490379 64.655 3 -0.457010500967301 0.12773403324584426 0.924917443269539 ['ENST00000498020.1_1_6:32904922-32905177:-|nuORF', 'ENSG00000242574|ENST00000418107|HLA-DMB'] 115480 6440 TRNNLEPL True PC9_epitope_Rep5 955.5086939490699 955.50758993586 29.745 2 -0.45703216159886445 0.12773403324584426 0.9249345234447396 ['CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79'] 42519 12841 IEENLSSPNP True H1975_Epitope_Rep2 1098.51931820242 1098.51822993586 54.504 2 -0.4571850540060153 0.12783283140131568 0.9250549554175452 ['nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENSG00000023287|ENST00000025008|RB1CC1', 'RB1CC1|p.D931Gfs*17|1|0.1|ENSG00000023287|chr8:52657039-52657040|-/T|frameshift_variant'] 90662 4532 REQEAREPVL True H1975_Epitope_Rep2 1225.6414990237697 1225.6398449037902 22.543 3 -0.45718821101281115 0.12784535406046535 0.9250574397782728 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 102522 10703 SLVQDTKL True PC9_epitope_Rep4 902.50729696674 902.50618993586 48.921 2 -0.45719133174734333 0.12784535406046535 0.9250598955001537 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant'] 93973 5585 RRILILGKL True PC9_epitope_Rep2 1080.74953335112 1080.74842993586 26.872 2 -0.4571996646686953 0.1278600269179004 0.9250664522559353 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENST00000554130.5_1_14:96968887-96993844:+|nuORF'] 141438 15196 YTFMITQSSL True PC9_epitope_Rep3 1189.56891124713 1189.5678099358602 63.597 2 -0.45729543291011376 0.12792516949580257 0.9251417591325064 ['ENST00000308543.3_1_1:202245458-202272411:+|nuORF'] 80005 9368 PFCRPQKIYHF True PC9_epitope_Rep4 1434.7230609030996 1434.72142490379 43.643 3 -0.45731475785401005 0.1279333838001514 0.9251569444204387 ['ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4'] 128986 22834 VQLDLTGIFM-[Oxidation] True PC9_epitope_Rep2 1151.58964707215 1151.58854993586 93.32 2 -0.45732290155583705 0.1279333838001514 0.9251633425499949 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'PRPF8|p.H1563R|1|0.59|ENSG00000174231|chr17:1660529-1660529|T/C|missense_variant'] 47469 21155 IVPDLDLQQV True PC9_epitope_Rep1 1138.62338934814 1138.6222899358602 86.205 2 -0.4573277977766452 0.1279333838001514 0.9251671889744469 ['ENSG00000159256|ENST00000400485|MORC3'] 93207 4518 RPPPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 23.868 2 -0.45733228882283433 0.1279333838001514 0.9251707168931499 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000253276|ENST00000523505|CCDC71L', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'ENSG00000145414|ENST00000274054|NAF1', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 59713 4946 LGCCSVLCSDK True NCI_RA007_Epitope_Rep3 1126.48208747202 1126.48045490379 26.451 3 -0.4573676640166356 0.12794590139115514 0.925198498860188 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 90912 8065 REYPDGTVKT True PC9_epitope_Rep1 1164.5775017848796 1164.57640993586 35.846 2 -0.45737741883658145 0.12794590139115514 0.9252061576896273 ['ENSG00000151849|ENST00000381884|CENPJ'] 108855 12884 SYYSQQGVP True PC9_epitope_Rep3 1027.4610750503098 1027.45996993586 54.575 2 -0.4573944278956937 0.1279605705826941 0.9252195098532572 ['ENST00000484541.5_1_10:127478031-127484749:-|nuORF', 'ENST00000465577.5_1_10:127477439-127486658:-|nuORF', 'ENSG00000188690|ENST00000368797|UROS'] 57248 11913 LDWRRRKP True PC9_epitope_Rep5 1125.65194456817 1125.6508499358602 50.821 2 -0.4574599686362532 0.12802570270315733 0.9252709333051875 ['ENST00000545932.5_1_12:108956369-108956426:+|nuORF'] 142940 13392 YYYVKNII True NCI_RA007_Epitope_Rep4 1074.57498260374 1074.57388993586 58.685 2 -0.45749271165751265 0.12805503692116196 0.9252966079720896 ['nc|ENSG00000158711|P28324-2|ELK4', 'ENSG00000158711|ENST00000357992|ELK4'] 28050 8204 FQSDSDSFNP True H1975_Epitope_Rep1 1142.45163256542 1142.45052993586 36.499 2 -0.45754834065247224 0.12805503692116196 0.9253402043048037 ['LRRC7|p.R1423Gfs*9|1|0.35|ENSG00000033122|chr1:70076225-70076225|C/-|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7', 'ENST00000415775.2_1_1:70225872-70503822:+|nuORF', 'LRRC7|p.N600Kfs*11|1|0.65|ENSG00000033122|chr1:70028286-70028287|-/AA|frameshift_variant', 'LRRC7|p.S947Vfs*6|1|0.26|ENSG00000033122|chr1:70038770-70038771|-/A|frameshift_variant', 'LRRC7|p.P1016Hfs*8|1|0.17|ENSG00000033122|chr1:70038980-70038980|G/-|frameshift_variant'] 94388 22654 RRRRGAGA True PC9_epitope_Rep4 898.5321637886598 898.53106993586 95.368 2 -0.45758187750721674 0.1280697032900491 0.92536647257691 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 125481 19850 VIWTKISVP True PC9_epitope_Rep3 1041.62226714933 1041.62116993586 81.588 2 -0.45765427686349225 0.12811800918372496 0.9254231433467299 ['ADAMTS12|p.R1181S|1|0.06|ENSG00000151388|chr5:33576483-33576483|T/A|missense_variant'] 65555 27202 LRRRRFKMRRM True PC9_epitope_Rep3 1604.9456415553998 1604.9440049037898 111.94 3 -0.4576723021215912 0.1281283638320775 0.9254372447618774 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 118085 19334 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 82.475 2 -0.45770473724213456 0.1281283638320775 0.9254626112858311 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 101745 5039 SLNKTDVI True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 26.816 2 -0.45773035741492546 0.1281283638320775 0.9254826408386614 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 695 9456 AAVDAGMAM True NCI_RA007_Epitope_Rep5 835.35681030591 835.35570993586 43.009 2 -0.45775900672511133 0.12815984661183713 0.9255050310024855 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 67327 10366 LSSEDDTSPG True H1975_Epitope_Rep3 1006.4090990471 1006.40800993586 44.927 2 -0.45776843811843276 0.12819132833260452 0.9255124001358649 ['ENSG00000160284|ENST00000291672|SPATC1L', 'SPATC1L|p.D172Tfs*44|1|0.79|ENSG00000160284|chr21:46168338-46168338|C/-|frameshift_variant'] 55700 17160 LALGYHFL True PC9_epitope_Rep5 932.5119884243601 932.51088993586 71.027 2 -0.4578080416373402 0.1282374705684494 0.9255433345766396 ['UVSSA|p.E432Rfs*152|1|0.28|ENSG00000163945|chr4:1375368-1375368|G/-|frameshift_variant', 'ENSG00000163945|ENST00000389851|UVSSA'] 85609 8837 QGIQKLLQ True PC9_epitope_Rep4 926.5549158654999 926.55380993586 41.524 2 -0.45781011496475676 0.1282374705684494 0.925544953640975 ['ENSG00000180934|ENST00000641900|OR56A1', 'nc|ENSG00000180934|Q8NGH5|OR56A1'] 7830 14537 ASVPEM[Oxidation]SGVGT True PC9_epitope_Rep1 1049.46992586229 1049.4688299358602 60.74 2 -0.4581263669728168 0.12830258488757337 0.925791427675894 ['ENST00000505045.1_1_5:26903562-26988455:-|nuORF', 'CDH9|p.R413Gfs*4|1|0.22|ENSG00000113100|chr5:26902493-26902493|G/-|frameshift_variant', 'ENSG00000113100|ENST00000231021|CDH9'] 91853 23521 RKKKRCRL True PC9_epitope_Rep6 1086.6920355583397 1086.6909299358601 103.61 2 -0.4581448054484267 0.1283086133252615 0.9258057679943945 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF', 'ENST00000478462.5_1_X:11777869-11779061:+|nuORF', 'nc|ENSG00000005302|Q8N5Y2-5|MSL3', 'nc|ENSG00000005302|Q8N5Y2-2|MSL3', 'nc|ENSG00000005302|Q8N5Y2-3|MSL3', 'ENSG00000005302|ENST00000312196|MSL3'] 108009 17816 SWRWMWRAWCL True PC9_epitope_Rep5 1579.73291439415 1579.7312549037902 73.548 3 -0.45814876839443397 0.1283086133252615 0.9258088497015892 ['nc|ENSG00000213347|Q9BW11-4|MXD3'] 127526 15669 VNQDLNNNL True PC9_epitope_Rep4 1042.5043368446202 1042.5032299358602 68.197 2 -0.45815482572384636 0.1283086133252615 0.9258135597710839 ['HERPUD1|p.P332L|1|0.61|ENSG00000051108|chr16:56942221-56942221|C/T|missense_variant'] 13481 7462 DNIQTVKRLRT True NCI_RA007_Epitope_Rep2 1342.7680965192199 1342.76698993586 33.652 2 -0.45817478412656903 0.1283086133252615 0.9258290765493005 63915 10200 LNQMMKSIRN True PC9_epitope_Rep2 1233.63219729337 1233.63108993586 44.571 2 -0.4581819103886061 0.1283086133252615 0.9258346159694447 ['ENST00000591877.1_1_17:57851181-57886196:+|nuORF'] 60100 9105 LGLSTYLVW True H1975_Epitope_Rep3 1050.5749826037397 1050.57388993586 40.01 2 -0.4582577498902133 0.128340087779777 0.9258935374347711 ['nc|ENSG00000018280|P49279-2|SLC11A1', 'ENSG00000018280|ENST00000233202|SLC11A1'] 87126 10198 QNVVVTEAVKE True PC9_epitope_Rep6 1214.65066672514 1214.6495699358602 49.869 2 -0.45828476621553854 0.12835258706216685 0.9259145135927539 ['nc|ENSG00000154645|Q9H9P2-3|CHODL'] 89273 18225 QVVSFLHTV True PC9_epitope_Rep3 1028.5654805492 1028.5643899358602 75.315 2 -0.45842197341690194 0.12835258706216685 0.9260209356787082 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.L1613F|1|0.33|ENSG00000085224|chrX:77633683-77633683|C/A|missense_variant'] 38444 4396 HENNNGQAAF True NCI_RA007_Epitope_Rep5 1100.4635346618 1100.4624299358602 23.537 2 -0.45844424453058275 0.12838405918950732 0.9260381926452491 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 30525 12406 GAGLRSHARI True H1975_Epitope_Rep1 1036.5890099584399 1036.5879099358601 52.754 2 -0.45852164144791374 0.12844916009483615 0.9260981269970167 ['ENSG00000171161|ENST00000306562|ZNF672'] 106026 15137 SSWSAGENDSY True H1975_Epitope_Rep2 1201.45236084141 1201.4512699358602 63.379 2 -0.45871720016687717 0.12849312304536437 0.9262493048434197 ['HRNR|p.S1837Pfs*154|1|0.12|ENSG00000197915|chr1:152216121-152216121|C/-|frameshift_variant', 'HRNR|p.W2324Cfs*137|1|0.1|ENSG00000197915|chr1:152214657-152214657|C/-|frameshift_variant', 'ENSG00000197915|ENST00000368801|HRNR', 'CON__Q86YZ3'] 38557 10963 HETGVDDTV True PC9_epitope_Rep5 971.41960416115 971.41850993586 47.158 2 -0.4587330832386826 0.12849312304536437 0.9262615671045875 ['DHDH|p.Y287Lfs*2|1|0.2|ENSG00000104808|chr19:48944469-48944470|-/T|frameshift_variant', 'ENSG00000104808|ENST00000221403|DHDH'] 34096 4944 GLYHSQKVL True NCI_RA007_Epitope_Rep3 1043.5763795860698 1043.5752899358602 26.443 2 -0.45876090297330113 0.12849312304536437 0.9262830389880393 ['ENSG00000182631|ENST00000330120|RXFP3'] 132677 18525 VVGLQEALA True PC9_epitope_Rep5 898.5123823471799 898.51128993586 76.281 2 -0.45878846802950785 0.12852459016393442 0.9263043069224951 ['ENST00000588974.1_1_19:34839831-34843857:+|nuORF'] 85459 5843 QFFDEMADP True H1975_Epitope_Rep2 1098.4328116971399 1098.43170993586 27.463 2 -0.45884206579932213 0.1285392427197525 0.9263456394715406 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1'] 66565 14471 LSIERLQKL True PC9_epitope_Rep2 1098.67609362734 1098.6749899358601 60.933 2 -0.4588902472032866 0.12855173341403545 0.9263827714165631 ['nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 114485 5000 TPYKQEINA True PC9_epitope_Rep6 1062.53457434374 1062.53346993586 26.84 2 -0.4589324912439829 0.12855173341403545 0.9264153091485213 ['ENSG00000138356|ENST00000374700|AOX1'] 741 15061 AAVLYEKDI True PC9_epitope_Rep2 1020.54916177872 1020.54806993586 63.189 2 -0.4590581313881439 0.12856422326832548 0.9265119793078357 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 730 10680 AAVGVLKAV True PC9_epitope_Rep4 826.5276384884999 826.52654993586 48.826 2 -0.45909467072485444 0.12856422326832548 0.9265400647980199 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF', 'ENST00000468035.1_1_7:77394853-77402638:+|nuORF', 'RSBN1|p.Q605E|1|0.06|ENSG00000081019|chr1:113768235-113768235|G/C|missense_variant', 'ENST00000462800.1_1_7:77397938-77402638:+|nuORF', 'PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'PTPN12-RSBN1L|8|fusion', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L', 'ENSG00000187257|ENST00000334955|RSBN1L'] 16125 9730 EEAPPPALPP True H1975_Epitope_Rep1 1016.5178616504398 1016.51676993586 42.353 2 -0.4591538766385281 0.12861249810863973 0.926585545266655 ['ENSG00000180720|ENST00000682254|CHRM4'] 19757 9078 ELSAKLALSI True NCI_RA007_Epitope_Rep4 1043.62266107215 1043.6215699358602 41.752 2 -0.4592067534472785 0.1286271477085505 0.9266261352415283 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 19352 17615 ELLKLYYRRL True NCI_RA007_Epitope_Rep1 1365.81325580649 1365.8121499358601 72.654 2 -0.45932734757055044 0.1286754198678614 0.9267186061828702 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF'] 67126 15312 LSQLQELQL True PC9_epitope_Rep5 1070.5971746003 1070.5960699358602 63.908 2 -0.4593602470318587 0.12870687916078274 0.9267438089234002 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 62892 9162 LLNKSGPV True PC9_epitope_Rep4 826.4912529797799 826.49014993586 42.834 2 -0.4593937284164162 0.12873184507799892 0.926769446713334 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 58987 6709 LEVENRSESP True NCI_RA007_Epitope_Rep1 1158.5516809598598 1158.5505899358602 30.106 2 -0.45939553521080506 0.12873184507799892 0.9267708299268819 ['ENSG00000257315|ENST00000550078|ZBED6'] 100867 15647 SLERKKENSLL True PC9_epitope_Rep2 1315.7459640923098 1315.7443049037902 65.461 3 -0.45941320923079565 0.12873184507799892 0.9267843588262394 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.P1892Lfs*5|1|0.23|ENSG00000104237|chr8:54629556-54629556|C/-|frameshift_variant', 'RP1|p.T860Lfs*5|1|0.15|ENSG00000104237|chr8:54626458-54626459|-/ACTTTTGCAA|frameshift_variant'] 20699 12188 EQEFLTEAL True H1975_Epitope_Rep2 1078.51825557326 1078.51714993586 51.963 2 -0.45942231313308735 0.12873184507799892 0.9267913263961083 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 66220 9556 LSEVAYLMEP True PC9_epitope_Rep3 1150.55801221026 1150.5569099358602 41.708 2 -0.45948643008894996 0.12877361662072212 0.926840374919814 ['ENSG00000112983|ENST00000254900|BRD8'] 122780 14853 VGGPEIEVG True PC9_epitope_Rep3 855.4337976733099 855.43270993586 62.268 2 -0.4595211596040804 0.12877361662072212 0.9268669259085605 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 40005 15057 HPPRYGHHR True PC9_epitope_Rep2 1155.5798422570701 1155.57820490379 63.175 3 -0.4595396304415475 0.12877361662072212 0.9268810422649816 ['ENST00000589876.5_3_19:46136340-46137582:-|nuORF'] 43183 13865 IFHCVFLY True H1975_Epitope_Rep2 1040.51535955264 1040.51426993586 58.477 2 -0.4595423361297157 0.12877361662072212 0.9268831098132805 ['ENST00000268182.9_1_15:91043867-91044059:+|nuORF'] 68962 11213 LTPEQLEAV True H1975_Epitope_Rep1 998.5284263341399 998.5273299358599 48.102 2 -0.45958152597952495 0.12878826080379205 0.926913048761748 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 82201 14048 PNYRRSRL True H1975_Epitope_Rep1 1060.5890099584399 1060.5879099358601 59.2 2 -0.45960404121465975 0.12880073955794605 0.9269302424892588 ['ENSG00000176399|ENST00000325870|DMRTA1'] 62789 18241 LLLSVQFQY True PC9_epitope_Rep4 1109.61209638845 1109.61098993586 78.233 2 -0.45964674762609947 0.12880073955794605 0.9269628417332819 ['ENST00000339362.9_1_15:73595766-73595847:+|nuORF'] 46652 8441 ITDNPGLQ True PC9_epitope_Rep1 856.42904664604 856.4279499358599 37.305 2 -0.4597269274507355 0.12881538254672584 0.9270239981354099 ['ENSG00000150261|ENST00000279783|OR8K1', 'OR8K1|p.G78Vfs*11|1|0.28|ENSG00000150261|chr11:56346267-56346267|C/-|frameshift_variant'] 83155 6148 PSSAPARRGA True NCI_RA007_Epitope_Rep2 968.5151763118399 968.51406993586 28.523 2 -0.45983207471584364 0.12886364018353866 0.9271041041657301 ['ENST00000357244.6_1_9:125667414-125667516:-|nuORF'] 46581 7250 ITAPPGTAA True PC9_epitope_Rep4 797.42831837005 797.4272299358599 35.197 2 -0.4599008058939244 0.12887178366750138 0.9271564090732652 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 41691 17885 IAHEIYQKILS True PC9_epitope_Rep3 1313.7343367794501 1313.73268490379 73.996 3 -0.45991614644773515 0.12887178366750138 0.9271680771192514 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 56923 10457 LDQHCFIQ True PC9_epitope_Rep1 1002.4593012285 1002.4582099358599 45.11 2 -0.4599358520745482 0.12887178366750138 0.9271830619137281 ['ENST00000404006.5_1_7:5024574-5028783:+|nuORF', 'ENST00000407184.5_2_7:5024574-5087708:+|nuORF', 'ENST00000493407.5_1_7:5024574-5026202:+|nuORF', 'ENST00000403969.5_1_7:5024574-5036351:+|nuORF'] 68964 11167 LTPEQLEAV True H1975_Epitope_Rep3 998.5284263341399 998.5273299358599 48.051 2 -0.45993783276955835 0.12887178366750138 0.9271845678908924 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 27094 11530 FLGVQAGK True PC9_epitope_Rep1 818.4650382319398 818.46394993586 49.23 2 -0.45996542217463254 0.1289032301435246 0.927205540942334 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 104761 13322 SQVSLYEY True H1975_Epitope_Rep1 987.4549270407099 987.4543749679301 56.348 1 -0.45999592373147125 0.12890487153203717 0.9272287192200144 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 2369 4220 AEQAERYDEM-[Oxidation] True H1975_Epitope_Rep2 1256.49793151528 1256.4968299358602 21.34 2 -0.46002820363865765 0.12890487153203717 0.9272532390985538 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 4258 9418 AIDYTQLGL True PC9_epitope_Rep2 992.51786165044 992.51676993586 41.566 2 -0.46003751881554356 0.12890487153203717 0.9272603130555293 ['nc|ENSG00000188747|Q86UR1-2|NOXA1', 'ENSG00000188747|ENST00000683555|NOXA1', 'nc|ENSG00000188747|Q86UR1-3|NOXA1'] 113425 9066 TLSIETEVVSI True H1975_Epitope_Rep2 1189.64418436237 1189.6425449037902 39.826 3 -0.46003869256238 0.12890487153203717 0.9272612043409606 ['ENSG00000188996|ENST00000380907|HUS1B'] 79148 9753 PALRSDEL True PC9_epitope_Rep1 899.4712458111899 899.47014993586 42.374 2 -0.4600631106456907 0.12890487153203717 0.927279743214399 ['ENST00000602755.1_1_1:109643134-109643182:+|nuORF'] 98682 16093 SGEDAFVF True PC9_epitope_Rep5 870.37594844402 870.3753949679301 66.889 1 -0.4600812039731865 0.12890487153203717 0.9272934764511553 ['DCAF8L1|p.V310F|1|0.35|ENSG00000226372|chrX:27980407-27980407|C/A|missense_variant'] 76360 18858 NPYTLYTF True PC9_epitope_Rep6 1017.4807478657299 1017.4801749679301 85.185 1 -0.4600819365747375 0.12890487153203717 0.9272940324454565 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 42623 14306 IEGRVVNAL True PC9_epitope_Rep6 969.5607295219299 969.55962993586 66.926 2 -0.460156273627741 0.1289531171231726 0.9273504222536167 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'ENST00000484252.5_1_2:128398362-128399806:-|nuORF', 'nc|ENSG00000072163|Q7Z4I7-3|LIMS2', 'ENSG00000072163|ENST00000355119|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-5|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-2|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-4|LIMS2'] 18172 19759 EIKWDDLAQLP True PC9_epitope_Rep2 1326.6819668534197 1326.68086993586 81.391 2 -0.46026221116468374 0.12903063196276443 0.9274306911252046 ['CYP4F12|p.E371K|1|0.41|ENSG00000186204|chr19:15685193-15685193|G/A|missense_variant'] 121365 7848 VEVPAAAP True H1975_Epitope_Rep2 752.4068546494799 752.40630496793 35.137 1 -0.4602683795150317 0.12903063196276443 0.9274353615500547 ['KCNK10|p.A19E|1|0.41|ENSG00000100433|chr14:88263533-88263533|G/T|missense_variant'] 36830 7976 GVLGAVEG True PC9_epitope_Rep5 700.3755545212 700.3750049679301 35.619 1 -0.4602855876383817 0.12903063196276443 0.9274483889041196 ['XKR6|p.G192V|1|0.24|ENSG00000171044|chr8:11200765-11200765|C/A|missense_variant'] 46235 4873 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 23.87 2 -0.4602938334794612 0.12904526665994556 0.9274546303795106 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 127984 9089 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 45.042 2 -0.460360737357407 0.12911843276936777 0.9275052472953839 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 87125 12153 QNVVVTEAVKE True PC9_epitope_Rep3 1214.65066672514 1214.6495699358602 51.786 2 -0.46036106474387567 0.12911843276936777 0.9275054948773643 ['nc|ENSG00000154645|Q9H9P2-3|CHODL'] 66680 8502 LSLAGGSELQ True PC9_epitope_Rep6 973.5080252427299 973.50692993586 42.435 2 -0.4603693582117067 0.12911843276936777 0.9275117663655222 ['nc|ENSG00000198788|Q02817|MUC2', 'ENSG00000198788|ENST00000675028|MUC2'] 42452 6339 IEDYMREWRAK True NCI_RA007_Epitope_Rep2 1495.7241831019098 1495.7225249037901 29.263 3 -0.4603878397926985 0.12911843276936777 0.9275257396800093 ['ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000602638.5_1_16:67765330-67839352:-|nuORF', 'ENST00000602525.5_1_16:67765330-67840439:-|nuORF'] 32659 18458 GGPLALDIP True PC9_epitope_Rep4 851.47526856247 851.47472496793 79.068 1 -0.46040395479958585 0.12911843276936777 0.9275379210184692 ['MYO18B|p.E1680Kfs*7|1|0.29|ENSG00000133454|chr22:25903717-25903717|G/-|frameshift_variant', 'nc|ENSG00000133454|Q8IUG5-2|MYO18B', 'MYO18B|p.P2237Rfs*36|1|0.31|ENSG00000133454|chr22:26026681-26026681|C/-|frameshift_variant', 'ENSG00000133454|ENST00000335473|MYO18B', 'nc|ENSG00000133454|Q8IUG5-3|MYO18B'] 29812 17884 FVQHQKLHPV True PC9_epitope_Rep1 1231.6825759901099 1231.68094490379 73.583 3 -0.4604313047504922 0.12913089497824298 0.9275585891247167 ['ENSG00000172888|ENST00000339296|ZNF621'] 109886 8025 TEFCAPCPSSP True H1975_Epitope_Rep2 1137.44708186229 1137.44598993586 35.816 2 -0.4604974754039184 0.12913089497824298 0.9276085638538727 ['ENST00000359904.7_1_17:66244373-66244691:+|nuORF'] 1462 6607 AEEGRGETA True H1975_Epitope_Rep2 918.4042884501799 918.4037349679301 30.325 1 -0.46051947609839017 0.12914552602399113 0.9276251703116419 ['ENSG00000179922|ENST00000325351|ZNF784', 'ENST00000591479.1_1_19:56133119-56135920:-|nuORF'] 60981 9228 LIEATVIA True NCI_RA007_Epitope_Rep5 828.4956696538799 828.49456993586 42.146 2 -0.46055879989490084 0.12916015657812946 0.9276548408890516 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 133258 23324 VVTLLSNY True PC9_epitope_Rep4 907.50148331031 907.5009349679301 97.974 1 -0.46066485375968047 0.12918724590935055 0.9277347863284513 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 19230 13764 ELIRQAALQ True PC9_epitope_Rep1 1040.59784330664 1040.59727496793 57.788 1 -0.4607019445812835 0.12918724590935055 0.927762720523594 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 41339 20005 HWKAFGDILY True H1975_Epitope_Rep2 1248.6291434349198 1248.6280499358602 82.927 2 -0.4607089710815377 0.12918724590935055 0.9277680108955724 ['ENSG00000150244|ENST00000417545|TRIM48'] 15244 7365 EAELNKHWRR True NCI_RA007_Epitope_Rep2 1337.6952659321298 1337.6941699358601 33.272 2 -0.46079960424874894 0.1292186738790801 0.9278362075210108 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 57893 10418 LEFVEDFI True H1975_Epitope_Rep2 1010.4960635766998 1010.49496993586 45.086 2 -0.46087106002519235 0.12923330197554092 0.9278899184015348 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000473375.1_1_3:180669142-180671642:+|nuORF'] 18281 13777 EIRFRYIIL True PC9_epitope_Rep1 1221.7233781729299 1221.7217249037901 57.84 3 -0.4610405421086348 0.1293232324929031 0.928017115709001 ['ENST00000547393.5_1_12:96397563-96406985:-|nuORF'] 11949 4643 DHNDGLGNAF True NCI_RA007_Epitope_Rep2 1058.44173658806 1058.4406299358602 22.686 2 -0.4610423415280581 0.1293232324929031 0.9280184647001635 ['ENSG00000271447|ENST00000605424|MMP28'] 114004 6934 TPAPPGPAT True PC9_epitope_Rep1 807.41266830591 807.41156993586 31.478 2 -0.4610576136201492 0.1293232324929031 0.9280299126476221 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 113769 22910 TMLKLSLTF True PC9_epitope_Rep1 1052.59400379616 1052.59290993586 92.921 2 -0.4610925410108742 0.1293232324929031 0.9280560857509591 ['ENST00000521776.2_1_13:52602562-52602661:+|nuORF'] 36311 16398 GVEHLRRHWL True PC9_epitope_Rep5 1301.71052207345 1301.70886490379 68.074 3 -0.4611020867506755 0.1293232324929031 0.9280632368796341 ['ENST00000358769.6_1_10:70066654-70092651:-|nuORF', 'ENST00000309049.8_1_10:70066654-70092651:-|nuORF'] 61250 21039 LINPDIKVV True PC9_epitope_Rep2 1009.61718176889 1009.61608993586 86.379 2 -0.4611282721287604 0.12935465448315248 0.9280828489815509 ['ENST00000473565.5_1_2:201718031-201724542:-|nuORF', 'ENST00000461981.5_1_2:201718031-201721754:-|nuORF', 'ENSG00000013441|ENST00000321356|CLK1', 'nc|ENSG00000013441|P49759-3|CLK1'] 100385 14240 SKVEKKHLP True PC9_epitope_Rep1 1064.6342288153598 1064.63312993586 59.599 2 -0.46115289446483243 0.12938607541782146 0.9281012843887317 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 114285 9652 TPPPGLASA True PC9_epitope_Rep6 809.42831837005 809.4272299358599 47.482 2 -0.4613161978777186 0.12944891412063086 0.9282234063816087 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 49468 11086 KEYVKWMMYWI True PC9_epitope_Rep5 1575.76181448059 1575.76015490379 47.63 3 -0.4613602280666248 0.12944891412063086 0.928256289232592 ['ENSG00000068615|ENST00000538924|REEP1', 'ENST00000464751.6_1_5:137774897-137779354:+|nuORF', 'nc|ENSG00000068615|Q9H902-4|REEP1', 'ENST00000510467.5_1_5:137774897-137780649:+|nuORF', 'nc|ENSG00000068615|Q9H902|REEP1', 'nc|ENSG00000068615|Q9H902-3|REEP1', 'ENSG00000132563|ENST00000378339|REEP2', 'nc|ENSG00000132563|Q9BRK0|REEP2'] 42622 16819 IEGRVVNAL True PC9_epitope_Rep3 969.5607295219299 969.55962993586 69.846 2 -0.46136799040912546 0.12945918710110849 0.928262084410932 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'ENST00000484252.5_1_2:128398362-128399806:-|nuORF', 'nc|ENSG00000072163|Q7Z4I7-3|LIMS2', 'ENSG00000072163|ENST00000355119|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-5|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-2|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-4|LIMS2'] 129489 25061 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 109.12 2 -0.46137027685505627 0.12945918710110849 0.9282637913059844 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 39403 5630 HKQRVIVML True NCI_RA007_Epitope_Rep3 1122.6695687782599 1122.6679349037902 29.137 3 -0.46143905664189494 0.12945918710110849 0.9283151138053625 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 142252 11316 YWRRDLERALY True H1975_Epitope_Rep1 1539.7946456202299 1539.79300490379 48.504 3 -0.4614459811947738 0.12946511042069023 0.9283202782868719 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 106190 8132 STDPSVLGKY True H1975_Epitope_Rep3 1065.5342399905699 1065.5331499358601 36.256 2 -0.46149850758056243 0.12946511042069023 0.9283594385843208 ['ENSG00000114315|ENST00000232424|HES1'] 93582 8079 RQMFFVISLDP True H1975_Epitope_Rep3 1351.6958430957498 1351.69420490379 36.05 3 -0.4615491139532534 0.12946511042069023 0.9283971423439329 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 19905 10442 ELTSHQGVL True PC9_epitope_Rep5 982.5083595959001 982.50726993586 45.152 2 -0.4615492693786029 0.12946511042069023 0.9283972581040582 ['nc|ENSG00000148655|Q9H2I8|LRMDA', 'ENST00000593699.5_1_10:77643188-78317043:+|nuORF', 'ENSG00000148655|ENST00000611255|LRMDA'] 79545 6711 PDDGKDLSP True H1975_Epitope_Rep2 942.42944056886 942.42834993586 30.726 2 -0.4615577865568118 0.12946511042069023 0.9284036013062062 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C', 'ENST00000380437.8_1_9:19290781-19335045:+|nuORF', 'ENST00000494124.2_1_9:19316810-19337609:+|nuORF'] 86722 15739 QLKQQIQSI True PC9_epitope_Rep4 1084.62405805448 1084.62296993586 68.464 2 -0.46157595665965323 0.12949652369596615 0.9284171312304716 ['ENSG00000100138|ENST00000401959|SNU13'] 6202 5693 APPAGTTDAA True H1975_Epitope_Rep3 870.4083112014599 870.40720993586 26.928 2 -0.46159663314825355 0.12951114245889803 0.9284325236117342 ['ENSG00000163283|ENST00000392027|ALPP'] 127577 12830 VNTANLLE True PC9_epitope_Rep5 872.46034677432 872.45924993586 54.361 2 -0.4616565024960282 0.1295929334318533 0.9284770694946606 ['nc|ENSG00000182352|Q96MU5|CD300LD-AS1'] 23030 6610 EVGPGEVNP True H1975_Epitope_Rep3 896.4239612655999 896.42286993586 30.377 2 -0.4617032939587125 0.1296134600530611 0.9285118607629623 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2'] 128829 12639 VQAVVPRGL True PC9_epitope_Rep6 937.5709002828098 937.56980993586 60.08 2 -0.46171383772359587 0.1296134600530611 0.9285196975552568 ['ENST00000478371.1_1_9:123629171-123630543:-|nuORF', 'ENST00000419155.5_1_9:123629171-123631115:-|nuORF'] 11510 16680 DFKDLWTKLKE True NCI_RA007_Epitope_Rep1 1421.75546614685 1421.75436993586 69.001 2 -0.4617167276256407 0.1296134600530611 0.9285218453264469 ['nc|ENSG00000101773|Q99708-3|RBBP8', 'ENSG00000101773|ENST00000327155|RBBP8', 'nc|ENSG00000101773|Q99708-2|RBBP8'] 78728 8557 PAAAPHLHP True PC9_epitope_Rep1 909.4820852784101 909.48098993586 37.752 2 -0.46171673378584427 0.1296134600530611 0.928521849904616 ['ENSG00000156150|ENST00000647563|ALX3'] 107600 18051 SVPNKDVFQEL True PC9_epitope_Rep3 1274.65066672514 1274.6495699358602 74.632 2 -0.4617274997631242 0.1296134600530611 0.928529850456656 ['ENSG00000115919|ENST00000264170|KYNU'] 137890 10649 YEVNKSNYKL True H1975_Epitope_Rep3 1256.6401020414398 1256.63900993586 46.035 2 -0.4617553246437042 0.1296134600530611 0.9285505228797802 ['ENSG00000132464|ENST00000396073|ENAM'] 56974 8467 LDRAGSWKE True H1975_Epitope_Rep3 1060.53015766964 1060.5290699358602 37.553 2 -0.461825356422833 0.12963615910273846 0.9286025198707859 ['ENST00000403593.8_1_12:113860182-113865900:+|nuORF'] 83621 10844 PVDNLVIK True H1975_Epitope_Rep3 896.53311779176 896.53256496793 46.793 1 -0.46183103474615816 0.12963615910273846 0.9286067338295844 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 65617 11737 LSAAWRRFE True PC9_epitope_Rep4 1134.5934266325398 1134.59232993586 52.907 2 -0.46183346711392304 0.12963615910273846 0.9286085388270462 ['ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 36792 5614 GVLASRLRDP True H1975_Epitope_Rep2 1082.61964138038 1082.61854993586 26.597 2 -0.46184173668597617 0.12963615910273846 0.9286146750381414 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 6248 14517 APQQASFSV True PC9_epitope_Rep3 933.45559574705 933.45448993586 60.961 2 -0.4618884971313978 0.12963615910273846 0.9286493599896267 ['HSPA12B|p.A382Qfs*4|1|0.36|ENSG00000132622|chr20:3750069-3750069|G/-|frameshift_variant', 'ENSG00000132622|ENST00000254963|HSPA12B'] 22673 9886 ETQELKWQKET True NCI_RA007_Epitope_Rep1 1418.7041588499796 1418.7030699358602 42.457 2 -0.46190580041241397 0.12964641885766093 0.9286621895163573 ['ENSG00000186714|ENST00000335185|CCDC73', 'nc|ENSG00000186714|Q6ZRK6-2|CCDC73'] 111787 20618 TIKSHALLL True PC9_epitope_Rep2 994.6175161220599 994.61640993586 84.741 2 -0.4619351103645566 0.12964641885766093 0.9286839148309954 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 126066 14885 VLEEYMGSDP True H1975_Epitope_Rep3 1138.4852411928198 1138.4841499358602 62.641 2 -0.46194606482070366 0.12964641885766093 0.9286920324454555 ['CDH7|p.V229Cfs*26|1|0.21|ENSG00000081138|chr18:65822137-65822138|-/T|frameshift_variant', 'CDH7|p.V582Afs*10|1|0.16|ENSG00000081138|chr18:65862794-65862795|-/GA|frameshift_variant', 'CDH7|p.F666Lfs*6|1|0.22|ENSG00000081138|chr18:65880531-65880531|G/-|frameshift_variant', 'ENSG00000081138|ENST00000397968|CDH7'] 119091 10087 VAGPSVTL True H1975_Epitope_Rep1 742.42250471362 742.4219549679301 43.736 1 -0.46197770130866833 0.12965885434154859 0.928715469656089 ['ENSG00000168758|ENST00000305476|SEMA4C', 'ENST00000467747.1_1_2:97526365-97527817:-|nuORF', 'ENST00000474420.1_1_2:97526365-97527817:-|nuORF'] 99467 13537 SICEKVIVP True PC9_epitope_Rep1 986.5470536037399 986.54594993586 56.926 2 -0.46199429087258115 0.12965885434154859 0.9287277558334839 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 12732 13673 DLEEPQPVP True H1975_Epitope_Rep2 1022.4920408254198 1022.4909499358599 57.735 2 -0.46199823563415077 0.1296734659615546 0.9287306769219991 ['ENSG00000149016|ENST00000476907|TUT1', 'TUT1|p.S282Pfs*31|1|0.15|ENSG00000149016|chr11:62578877-62578877|A/-|frameshift_variant'] 68520 13812 LTGEEEFEL True PC9_epitope_Rep5 1065.4866210918099 1065.48552993586 58.146 2 -0.46203187018789893 0.12968807709095792 0.9287555771737154 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant'] 96863 6458 SASLLAPASV True PC9_epitope_Rep2 914.50729696674 914.50618993586 30.255 2 -0.46210876030642084 0.12971729787805533 0.9288124594589888 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP'] 138050 13989 YGDLTDSTCL True PC9_epitope_Rep4 1086.45394106454 1086.45284993586 61.715 2 -0.4621091373216243 0.12971729787805533 0.9288127382298925 ['nc|ENSG00000112699|O60547-2|GMDS', 'ENSG00000112699|ENST00000380815|GMDS'] 42140 9237 IDNQNLLFELS True H1975_Epitope_Rep1 1304.66123140884 1304.6601299358601 40.439 2 -0.46213059595881634 0.12973190753579883 0.9288286028294555 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF'] 43878 5675 IHTDAFSKR True NCI_RA007_Epitope_Rep3 1073.56179215109 1073.5606899358602 29.305 2 -0.46218965797849354 0.1297589471563822 0.9288722451714829 ['ENSG00000186230|ENST00000334181|ZNF749'] 125444 21594 VITYYILF True PC9_epitope_Rep2 1030.57391997458 1030.57282993586 88.534 2 -0.462191042016698 0.1297589471563822 0.9288732674687287 ['KCNMB1|p.V35F|1|0.38|ENSG00000145936|chr5:170385345-170385345|C/A|missense_variant'] 105535 7451 SSARHTVAL True PC9_epitope_Rep5 940.5090283022399 940.50792993586 33.614 2 -0.4622288426159539 0.1297589471563822 0.9289011811521551 ['PLXNA4|p.A1683Pfs*63|1|0.33|ENSG00000221866|chr7:132146518-132146518|C/-|frameshift_variant'] 95519 23722 RWRHRRPR True NCI_RA007_Epitope_Rep3 1218.70710845886 1218.70600993586 102.84 2 -0.46232363668252247 0.12982173431362676 0.9289711210555434 ['ENST00000293780.4_1_17:4804403-4804460:-|nuORF'] 99630 5882 SIFMWRQHHYQ True H1975_Epitope_Rep3 1531.71428712455 1531.71265490379 27.634 3 -0.4623276897451524 0.12982173431362676 0.9289741095176547 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 11345 11761 DENINVLDLY True H1975_Epitope_Rep2 1206.57683307854 1206.5757299358602 50.314 2 -0.4623832935543159 0.12985094668994226 0.9290150921895282 ['ENSG00000174145|ENST00000309447|NWD2'] 78876 9316 PAGAAWAGP True PC9_epitope_Rep3 796.3867879112398 796.38568993586 40.774 2 -0.46239710452061633 0.12985094668994226 0.9290252669315662 ['ENSG00000170162|ENST00000326274|VGLL2'] 137996 9896 YFRIRFYFRNW True PC9_epitope_Rep6 1666.8521009266997 1666.85044490379 48.567 3 -0.4624629965819166 0.12989694182416328 0.9290737853748251 ['ENSG00000105397|ENST00000525621|TYK2'] 135011 13068 WDANDMVI True PC9_epitope_Rep2 962.41676771018 962.41566993586 55.544 2 -0.4625130790306719 0.12989694182416328 0.9291106348159923 ['MTUS1|p.A991Hfs*50|1|0.46|ENSG00000129422|chr8:17656001-17656001|T/-|frameshift_variant', 'MTUS1|p.I571Lfs*38|1|0.19|ENSG00000129422|chr8:17754097-17754097|T/-|frameshift_variant', 'nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'MTUS1-FGL1|3|fusion', 'MTUS1-FGL1|2|fusion', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 78932 12440 PAGSIISLNAA True PC9_epitope_Rep3 1012.55530978832 1012.55420993586 52.876 2 -0.46256129472760604 0.12990718517648245 0.9291460880028319 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2'] 67038 12172 LSPSTIVSIP True H1975_Epitope_Rep3 1012.580461907 1012.57936993586 51.99 2 -0.46257409588735354 0.12990718517648245 0.9291554969966981 ['nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3'] 100943 9379 SLFHCRDGGK True NCI_RA007_Epitope_Rep2 1118.52911212382 1118.5280099358602 41.091 2 -0.46258385360114535 0.12990718517648245 0.9291626679679672 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 6855 7147 AQGRQKHS True PC9_epitope_Rep3 910.4733114998598 910.47220993586 32.504 2 -0.46261574264580024 0.12995535564432212 0.9291860969443445 ['OR6Y1|p.A242Hfs*9|1|0.23|ENSG00000197532|chr1:158547382-158547382|C/-|frameshift_variant'] 93086 7447 RPNDSRMLVA True PC9_epitope_Rep5 1157.59752603681 1157.59588490379 33.599 3 -0.4626816222031288 0.12998674118456607 0.9292344679506568 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 86430 6369 QKKKKKKKK True NCI_RA007_Epitope_Rep4 1170.8288463009796 1170.82720490379 31.101 3 -0.46290344871764705 0.13006629185197616 0.9293970344240923 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 57697 4966 LEEIYELHA True H1975_Epitope_Rep3 1115.54989005471 1115.5487899358602 24.23 2 -0.4629508385363482 0.13006629185197616 0.9294317031331747 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1'] 113463 15212 TLSSQVINP True PC9_epitope_Rep3 957.51311062317 957.51200993586 63.658 2 -0.46298736069423213 0.13009767395025676 0.9294584067950021 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 112055 13551 TITAEVLAID True H1975_Epitope_Rep3 1044.5702911461199 1044.56918993586 57.406 2 -0.4630486210257115 0.13014365308451367 0.9295031694899072 ['DSG3|p.L856Tfs*9|1|0.11|ENSG00000134757|chr18:31475819-31475820|-/A|frameshift_variant', 'ENSG00000134757|ENST00000257189|DSG3'] 112483 14917 TLDLPALTRR True NCI_RA007_Epitope_Rep2 1154.6771562565 1154.6760499358602 62.701 2 -0.46306272440772006 0.13014365308451367 0.9295134697053637 ['ENSG00000261150|ENST00000615648|EPPK1'] 116952 8859 TVGEITDALKK True H1975_Epitope_Rep1 1173.6605031328497 1173.6594099358601 38.995 2 -0.4630996621762586 0.13019181392538892 0.9295404377163723 ['ENSG00000146085|ENST00000274813|MMUT'] 78915 6840 PAGPEEEPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 31.226 1 -0.46323067709789645 0.13032387984561167 0.9296359859950668 ['ENSG00000145743|ENST00000542267|FBXL17'] 57601 9592 LEEANLQK True PC9_epitope_Rep2 943.49746055903 943.49636993586 42.24 2 -0.46325914719261774 0.1303362867498993 0.9296567274389396 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129873642-129918394:-|nuORF'] 62890 7265 LLNKSGPV True NCI_RA007_Epitope_Rep5 826.4912529797799 826.49014993586 34.62 2 -0.4632687349915103 0.1303362867498993 0.9296637107465797 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 16690 8360 EERNPASL True PC9_epitope_Rep3 914.4457593393398 914.44466993586 37.126 2 -0.4633430807927558 0.13033994429343265 0.9297178311486605 ['ENST00000488620.5_1_9:116327559-116353744:+|nuORF'] 69393 15066 LTWIEYWP True PC9_epitope_Rep1 1106.54368247546 1106.5425899358602 62.771 2 -0.4633591493647129 0.13033994429343265 0.9297295214534579 ['ENSG00000106804|ENST00000223642|C5'] 69437 11248 LTYLNKHRRY True PC9_epitope_Rep4 1362.75205253226 1362.7504049037902 51.039 3 -0.4634010791653582 0.13033994429343265 0.9297600149475619 ['nc|ENSG00000069188|Q58EX2-3|SDK2'] 87930 19169 QRLENEMASI True PC9_epitope_Rep4 1189.5761218858897 1189.57447490379 81.831 3 -0.46341018659743655 0.13033994429343265 0.9297666361351544 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 113475 20064 TLSVPNISL True PC9_epitope_Rep1 942.53859709502 942.53750993586 82.002 2 -0.46343243763884995 0.13033994429343265 0.9297828095440092 ['ENSG00000164715|ENST00000297293|LMTK2', 'LMTK2|p.D236Tfs*31|1|0.22|ENSG00000164715|chr7:98171584-98171584|G/-|frameshift_variant'] 12813 4425 DLFQQRYHHTK True NCI_RA007_Epitope_Rep4 1471.73204536367 1471.7303849037899 23.383 3 -0.46343650113944157 0.13033994429343265 0.9297857626368323 ['ENSG00000185352|ENST00000376705|HS6ST3'] 118964 16274 VADVLGTAL True PC9_epitope_Rep3 857.48583324617 857.48528496793 67.736 1 -0.46351405324571293 0.1303713149549489 0.9298420926084832 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 13999 16124 DRDVYLVI True PC9_epitope_Rep4 991.53384606775 991.53274993586 69.961 2 -0.46357984437100036 0.13039174565892123 0.9298898354142011 ['ENSG00000152240|ENST00000282058|HAUS1', 'ENST00000591098.1_1_18:43684359-43698283:+|nuORF'] 142317 13092 YYDPKHVIF True PC9_epitope_Rep6 1180.59169529704 1180.5900449037902 61.967 3 -0.46358863602426986 0.13039174565892123 0.9298962121783776 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 5523 16311 ALYREITLK True PC9_epitope_Rep2 1105.64954452633 1105.64844993586 67.986 2 -0.46359053404219636 0.13039174565892123 0.9298975887534663 ['ENSG00000181544|ENST00000650831|FANCB'] 78884 8451 PAGALPAAQ True PC9_epitope_Rep4 794.42865272322 794.42754993586 39.97 2 -0.46363342646601413 0.13039174565892123 0.9299286882696356 ['ENST00000332272.8_1_16:75513067-75513235:-|nuORF'] 99640 18642 SIFSGFVIF True NCI_RA007_Epitope_Rep3 1015.5378688190299 1015.5372749679301 81.562 1 -0.46367430672928145 0.13039174565892123 0.9299583127044708 ['SLC6A5|p.A516S|1|0.44|ENSG00000165970|chr11:20630737-20630737|G/T|missense_variant'] 81298 17121 PLAEGSFAP True PC9_epitope_Rep1 887.4388830537499 887.43778993586 70.68 2 -0.46372063031400446 0.13039174565892123 0.9299918626859204 ['ENSG00000150594|ENST00000280155|ADRA2A'] 55896 6986 LAQKTTTL True NCI_RA007_Epitope_Rep2 874.51238234718 874.51128993586 31.796 2 -0.46377165696804123 0.13040633493272488 0.9300287954993726 ['ENSG00000168280|ENST00000435030|KIF5C', 'nc|ENSG00000168280|O60282-2|KIF5C', 'ENST00000460377.1_2:149835462-149853923:+|nuORF'] 17043 5452 EGESWRESAR True NCI_RA007_Epitope_Rep2 1205.5425132584899 1205.5414099358602 25.828 2 -0.46383107737439155 0.1304377002701025 0.9300717728110712 ['ENSG00000141696|ENST00000393928|P3H4'] 278 4945 AAGPPVEERFR True PC9_epitope_Rep2 1227.63601972051 1227.6343649037901 24.383 3 -0.46388519044800836 0.13045228828345187 0.9301108826095117 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 12165 4728 DIENCVKWMVP True NCI_RA007_Epitope_Rep2 1332.62062955016 1332.61897490379 23.019 3 -0.463960304385476 0.13046687580734453 0.9301651250931723 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 48227 12840 IYQDVTLKW True NCI_RA007_Epitope_Rep4 1164.6179100448799 1164.6168099358601 56.471 2 -0.4639888169770623 0.1304770851506408 0.9301857012218964 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9', 'nc|ENSG00000122507|Q3SYG4-5|BBS9'] 88094 20028 QRRRLHRRRRS True NCI_RA007_Epitope_Rep3 1575.9519235940297 1575.95026490379 87.279 3 -0.4640283902815371 0.1304770851506408 0.9302142467103425 ['ENST00000215832.10_1_22:22221790-22221904:-|nuORF'] 73604 23137 MVWPRRRQRLL True PC9_epitope_Rep4 1509.8826898623297 1509.88105490379 97.216 3 -0.46404761659483296 0.1304770851506408 0.930228109976377 ['ENST00000370272.8_1_1:93811706-93811775:+|nuORF', 'ENST00000370267.1_1_1:93811706-93812169:+|nuORF'] 81009 20819 PILEMSAV True PC9_epitope_Rep2 858.45209058974 858.45098993586 85.524 2 -0.46410063857199096 0.13048948233636395 0.9302663239351661 ['ENST00000493395.1_1_1:110201441-110203811:+|nuORF', 'ENST00000369833.5_1_1:110202357-110202663:+|nuORF'] 16811 6083 EEVSVTVKA True H1975_Epitope_Rep2 960.5127762699999 960.51166993586 28.373 2 -0.4641355538375287 0.13048948233636395 0.9302914736990072 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 121277 4789 VETLENIIAT True H1975_Epitope_Rep3 1101.5917548666898 1101.59064993586 23.548 2 -0.464206864050035 0.13052084206994885 0.9303428037150892 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 58675 7405 LERLIKDEI True PC9_epitope_Rep4 1127.65502382959 1127.6533649037901 35.831 3 -0.46424854309973296 0.13056897477187332 0.930372782888463 ['nc|ENSG00000276141|Q1A5X7|WHAMMP3'] 19721 13054 ELRRELQAL True PC9_epitope_Rep2 1126.64585612822 1126.64474993586 55.492 2 -0.4642840414641611 0.13060033212003289 0.9303983036240917 ['ENSG00000161904|ENST00000293760|LEMD2'] 81864 20562 PLQVLVVP True PC9_epitope_Rep2 863.5480395799099 863.54694993586 84.525 2 -0.46433603557634623 0.1306484618739307 0.9304356624395955 ['MAN2A1|p.F169L|1|0.23|ENSG00000112893|chr5:109716234-109716234|T/C|missense_variant'] 116954 9298 TVGEITDALKK True NCI_RA007_Epitope_Rep2 1173.6605031328497 1173.6594099358601 40.774 2 -0.4643585678096182 0.13066085206306607 0.9304518444974683 ['ENSG00000146085|ENST00000274813|MMUT'] 99968 12175 SIPDISTLP True H1975_Epitope_Rep2 941.5069626135701 941.50641496793 51.914 1 -0.46436365588087813 0.13066085206306607 0.930455497963723 ['ENST00000531925.5_1_19:1806419-1810672:-|nuORF', 'ATP8B3|p.C393Afs*113|1|0.2|ENSG00000130270|chr19:1800426-1800426|G/-|frameshift_variant', 'ATP8B3|p.E625Rfs*10|1|0.28|ENSG00000130270|chr19:1796146-1796146|C/-|frameshift_variant', 'nc|ENSG00000130270|O60423-3|ATP8B3', 'ENSG00000130270|ENST00000310127|ATP8B3', 'nc|ENSG00000130270|O60423-1|ATP8B3'] 32317 3569 GFEDLERGRRE True NCI_RA007_Epitope_Rep2 1362.6640253734997 1362.66238490379 18.533 3 -0.4645525393263132 0.1308154160936504 0.9305909549165432 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 80854 6075 PHSPGLAAP True PC9_epitope_Rep2 845.43955176009 845.43844993586 28.761 2 -0.4645578603742919 0.1308154160936504 0.9305947660968049 ['nc|ENSG00000158859|O75173-2|ADAMTS4'] 76006 7839 NLVVMFFYFVS True PC9_epitope_Rep6 1364.6838814297198 1364.68278993586 39.548 2 -0.46457512908855075 0.1308154160936504 0.9306071329431199 ['ENST00000370272.8_1_1:93826667-93826868:+|nuORF'] 35762 17301 GTIGLIHAI True PC9_epitope_Rep2 893.53345214493 893.53234993586 71.808 2 -0.4645788229059137 0.1308154160936504 0.9306097778816894 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 100742 20461 SLDYEALQAF True PC9_epitope_Rep2 1155.5448046742697 1155.54370993586 84.133 2 -0.4645820115269016 0.1308154160936504 0.9306120609755779 ['PCDHB2|p.A658Pfs*84|1|0.14|ENSG00000112852|chr5:141096760-141096760|C/-|frameshift_variant', 'ENSG00000112852|ENST00000194155|PCDHB2', 'PCDHB5|p.R516M|1|0.39|ENSG00000113209|chr5:141136981-141136981|G/T|missense_variant', 'PCDHB16|p.Q750Nfs*6|1|0.11|ENSG00000272674|chr5:141184806-141184806|C/-|frameshift_variant', 'ENSG00000272674|ENST00000609684|PCDHB16', 'ENSG00000113212|ENST00000231137|PCDHB7', 'ENSG00000113209|ENST00000231134|PCDHB5', 'ENSG00000081818|ENST00000194152|PCDHB4', 'ENSG00000113205|ENST00000231130|PCDHB3', 'ENSG00000120324|ENST00000239446|PCDHB10', 'ENSG00000177839|ENST00000316105|PCDHB9', 'ENSG00000113248|ENST00000231173|PCDHB15', 'ENSG00000120322|ENST00000239444|PCDHB8', 'ENSG00000197479|ENST00000354757|PCDHB11', 'nc|ENSG00000197479|Q9Y5F2-2|PCDHB11'] 113831 9556 TNFIRSHLNK True NCI_RA007_Epitope_Rep1 1228.6676542019597 1228.66654993586 41.168 2 -0.46459186384165607 0.1308154160936504 0.9306191147664675 ['CPA3|p.E296K|1|0.18|ENSG00000163751|chr3:148883720-148883720|G/A|missense_variant'] 131137 20869 VTEGVIVPE True PC9_epitope_Rep1 941.5069626135698 941.50641496793 85.097 1 -0.4646220842264337 0.13084237535427393 0.9306407455344476 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 96957 10588 SAWDLTTHPLT True PC9_epitope_Rep5 1240.60880191316 1240.60714490379 45.714 3 -0.464635812945771 0.13084237535427393 0.9306505693175873 ['nc|ENSG00000164920|Q8N2R0-3|OSR2'] 97476 10922 SEEGLVVY True H1975_Epitope_Rep3 894.4334633201399 894.43236993586 47.099 2 -0.46468043003431825 0.13084237535427393 0.9306824837000642 ['UBE3C|p.L339V|1|0.25|ENSG00000009335|chr7:157183901-157183901|C/G|missense_variant'] 30266 7746 FYYSPSGK True NCI_RA007_Epitope_Rep1 947.4388830537498 947.43778993586 34.123 2 -0.46474364172431926 0.13085475675403732 0.9307276672667998 ['ENSG00000071655|ENST00000434436|MBD3'] 92613 19245 RMWTRRWPRCR True NCI_RA007_Epitope_Rep2 1602.8248577163797 1602.8237699358601 79.75 2 -0.4647462080109045 0.13085475675403732 0.9307295008643033 ['ENST00000543741.6_1_14:24424287-24424359:+|nuORF'] 9331 7839 AVQVYHANP True PC9_epitope_Rep2 997.4981292653699 997.49702993586 35.523 2 -0.46477414875052614 0.13086713732329414 0.9307494604410889 ['nc|ENSG00000182973|Q9H9A5-4|CNOT10', 'nc|ENSG00000182973|Q9H9A5-3|CNOT10', 'nc|ENSG00000182973|Q9H9A5-5|CNOT10', 'nc|ENSG00000182973|Q9H9A5-2|CNOT10', 'ENSG00000182973|ENST00000328834|CNOT10', 'nc|ENSG00000182973|Q9H9A5-6|CNOT10'] 42322 17776 IDYTVMVF True PC9_epitope_Rep3 986.47830533758 986.47720993586 73.576 2 -0.46483293165026857 0.13086713732329414 0.9307914287679481 ['ENSG00000137996|ENST00000370128|RTCA', 'nc|ENSG00000137996|O00442-2|RTCA'] 102158 6723 SLRRRGSSI True NCI_RA007_Epitope_Rep4 1030.59957464214 1030.59846993586 32.483 2 -0.4648728657563486 0.1308751278568674 0.9308199217787386 ['ENST00000327247.9_1_1:155210919-155214415:-|nuORF'] 70915 24343 LYFDVEPFVF True PC9_epitope_Rep2 1274.62232671898 1274.6212299358601 99.186 2 -0.4648916399358588 0.1308751278568674 0.9308333121028755 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'KAT8|p.Y286H|1|0.07|ENSG00000103510|chr16:31130101-31130101|T/C|missense_variant'] 46222 4155 ISNIEDLPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 21.08 2 -0.464930684525342 0.1308751278568674 0.9308611495415304 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 57874 13145 LEFLASNDP True PC9_epitope_Rep2 1004.48147614172 1004.48036993586 55.834 2 -0.46493842610844366 0.1308751278568674 0.9308666673592992 ['nc|ENSG00000266074|Q9P281|BAHCC1'] 81834 11960 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 53.796 2 -0.4649909893812076 0.13090427404886065 0.9309041173218275 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 55884 13341 LAQEGVIDQ True PC9_epitope_Rep6 971.49237517859 971.49126993586 62.975 2 -0.46506252027001754 0.13090427404886065 0.930955040537418 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF'] 7819 3092 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 16.295 2 -0.4651538756175162 0.13095238095238096 0.9310200087992136 ['ENSG00000100403|ENST00000352645|ZC3H7B', 'ZC3H7B|p.S399Rfs*90|1|0.1|ENSG00000100403|chr22:41341139-41341139|C/-|frameshift_variant'] 29120 21305 FTLPEVAEC True PC9_epitope_Rep5 1007.4633835494299 1007.46287496793 87.003 1 -0.46525571755650236 0.13101725323183716 0.9310923448422479 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 26021 10274 FGGLGGGSV True NCI_RA007_Epitope_Rep5 749.37080349393 749.37025496793 46.149 1 -0.4653559114997519 0.1310966919839713 0.9311634180907861 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'KRT19|p.Y256Ifs*2|1|0.12|ENSG00000171345|chr17:41524435-41524436|-/T|frameshift_variant'] 50047 6552 KKEQEVYVK True NCI_RA007_Epitope_Rep5 1149.6393737654498 1149.63772490379 31.864 3 -0.4653790433137972 0.1310966919839713 0.9311798138178181 ['ENSG00000118492|ENST00000397944|ADGB'] 126780 9876 VLPKRQSNHRQ True H1975_Epitope_Rep3 1361.76401419829 1361.76290993586 43.017 2 -0.4655751386390785 0.1311615585809134 0.9313186101411483 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 100604 19387 SLCVTWTVP True PC9_epitope_Rep2 1004.50010341132 1004.49900993586 79.95 2 -0.4655977718778506 0.13117612540866797 0.9313346075170116 ['ENST00000422989.5_1_19:44093190-44093415:-|nuORF'] 27016 10266 FLETRKSWRK True NCI_RA007_Epitope_Rep2 1349.7568035595298 1349.75515490379 44.524 3 -0.4656499441169432 0.13119426004157447 0.9313714656692816 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 82740 24087 PRIRYRKKKRI True NCI_RA007_Epitope_Rep2 1512.9841181557597 1512.98248490379 101.2 3 -0.46565689356645856 0.13119426004157447 0.9313763733935625 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 93920 14382 RRGGGHAG True NCI_RA007_Epitope_Rep3 766.3946672563399 766.39356993586 63.888 2 -0.46567047739331824 0.13119426004157447 0.93138596507686 ['ENST00000357360.4_1_X:153707219-153707480:-|nuORF'] 82294 2768 PPHPPPPPP True H1975_Epitope_Rep3 931.49158733295 931.49048993586 14.733 2 -0.4657314423277497 0.13119426004157447 0.931428992536435 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 47790 15639 IYFKKPLNI True PC9_epitope_Rep1 1134.68011637862 1134.67846490379 64.976 3 -0.4657513527164828 0.13119426004157447 0.9314430375026974 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 84747 15931 QDSVTLSTI True PC9_epitope_Rep3 962.4920408254201 962.4914949679301 66.425 1 -0.4657610596594407 0.13119426004157447 0.9314498835705673 ['ENST00000238112.7_1_2:9574072-9576421:+|nuORF'] 34608 5988 GPVVMCKKAAK True NCI_RA007_Epitope_Rep5 1130.6304063882199 1130.6293099358602 29.717 2 -0.46577695010833303 0.13119426004157447 0.9314610888792082 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 68036 12051 LTDKPVLGCRP True H1975_Epitope_Rep1 1197.65397828377 1197.65288993586 51.364 2 -0.46581947264892803 0.13120882436759257 0.9314910628809213 ['ENST00000592087.1_1_19:36980552-36981209:+|nuORF'] 68792 10031 LTLLSEQAP True PC9_epitope_Rep2 970.53351171458 970.53240993586 43.909 2 -0.4658618892724361 0.1312211885005448 0.9315209459996253 ['ENSG00000242173|ENST00000219409|ARHGDIG'] 70343 12841 LVSLLEHLS True PC9_epitope_Rep4 1009.58079626017 1009.57968993586 57.258 2 -0.46590879393698925 0.1312211885005448 0.9315539721611381 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000461493.1_1_7:6089476-6098783:-|nuORF'] 103548 8031 SPSATVVSA True PC9_epitope_Rep5 817.41814760917 817.4175949679301 35.83 1 -0.46593577603104513 0.13123575164275178 0.9315729616308243 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 2975 4980 AFGDTKFS True NCI_RA007_Epitope_Rep2 871.40758292547 871.40648993586 23.994 2 -0.46597815989973895 0.13126267620979232 0.9316027773650513 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000598355.1_1_19:59061017-59061917:+|nuORF'] 13107 15047 DLQQQIMT True PC9_epitope_Rep5 975.46953155903 975.46842993586 62.883 2 -0.4659888660930128 0.13126267620979232 0.931610306288178 ['nc|ENSG00000137343|Q5SQI0-7|ATAT1', 'nc|ENSG00000137343|Q5SQI0-6|ATAT1', 'nc|ENSG00000137343|Q5SQI0-5|ATAT1', 'nc|ENSG00000137343|Q5SQI0-4|ATAT1', 'nc|ENSG00000137343|Q5SQI0-3|ATAT1', 'ENSG00000137343|ENST00000330083|ATAT1', 'nc|ENSG00000137343|Q5SQI0|ATAT1', 'ENST00000493388.5_1_6:30594710-30608409:+|nuORF', 'ENST00000468713.5_1_6:30594689-30613691:+|nuORF'] 19985 11572 ELWNKYRERQR True H1975_Epitope_Rep3 1576.8222573503997 1576.82116993586 49.64 2 -0.4660025214575295 0.13126267620979232 0.9316199076665274 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1'] 72171 11171 MGEVVTPTAP True H1975_Epitope_Rep3 1000.4899326504399 1000.4893749679301 48.067 1 -0.4660667611318964 0.13127283698166337 0.9316650535196834 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'nc|ENSG00000148356|Q6UWE0-3|LRSAM1', 'ENST00000483302.5_1_9:130248105-130265175:+|nuORF'] 94146 9519 RRNDKIIVF True PC9_epitope_Rep2 1159.6825759901099 1159.68094490379 41.962 3 -0.46608797661663764 0.13127283698166337 0.9316799550492251 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 81779 17956 PLPPFPPGLF True PC9_epitope_Rep6 1080.60080342876 1080.5997099358601 81.696 2 -0.46609442414154295 0.13127283698166337 0.9316844829232537 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 62851 19987 LLMEELLL True PC9_epitope_Rep6 972.5565556582799 972.55544993586 89.546 2 -0.4661094388660495 0.13128739754957008 0.931695025803389 ['ENST00000264992.7_1_3:130744435-130745401:-|nuORF', 'ENST00000504725.1_1_3:130745275-130745401:-|nuORF'] 86723 14906 QLKQQIQSI True PC9_epitope_Rep6 1084.62405805448 1084.62296993586 69.326 2 -0.46616227086832124 0.13129315546021317 0.9317321067850529 ['ENSG00000100138|ENST00000401959|SNU13'] 29901 18468 FVVRGQPADVF True PC9_epitope_Rep5 1233.6506071554898 1233.64897490379 76.059 3 -0.4661811957946974 0.13129315546021317 0.9317453834752036 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 127975 9535 VPHLLTEA True PC9_epitope_Rep4 878.48616759934 878.48506993586 44.288 2 -0.46619720353899136 0.13129315546021317 0.9317566111322796 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 9434 24059 AVVDEFWLL True PC9_epitope_Rep3 1090.5698972233 1090.5688099358601 97.828 2 -0.4662142690520295 0.13129315546021317 0.9317685781762872 ['ENSG00000107554|ENST00000324109|DNMBP'] 125564 17544 VKKKKKKRQRY True NCI_RA007_Epitope_Rep4 1488.9728847657198 1488.97123490379 75.933 3 -0.4662265942296359 0.13129315546021317 0.9317772194837514 ['ENST00000358951.6_1_1:220323782-220323881:-|nuORF'] 112769 4232 TLHQRFHTGDK True NCI_RA007_Epitope_Rep2 1338.6792815148199 1338.67762490379 21.099 3 -0.4663561864644906 0.1313346293068776 0.9318679959099663 ['ZNF540|p.E240D|1|0.07|ENSG00000171817|chr19:37612000-37612000|G/C|missense_variant'] 21394 9634 ERIKQQIAL True PC9_epitope_Rep5 1097.65569253593 1097.65458993586 42.021 2 -0.4663699083207022 0.1313346293068776 0.9318775990005952 ['ENSG00000144224|ENST00000272638|UBXN4'] 59436 20408 LFNPYYDPLQW True H1975_Epitope_Rep1 1454.68705223386 1454.6859499358602 84.876 2 -0.46638841576686924 0.1313346293068776 0.9318905485803037 ['ENSG00000089199|ENST00000378961|CHGB'] 128282 17367 VPPMHLADI True PC9_epitope_Rep2 991.5160878286299 991.51498993586 72.056 2 -0.4664183538473387 0.1313346293068776 0.9319114896758574 ['ENSG00000148843|ENST00000369797|PDCD11', 'PDCD11|p.Q1325Sfs*3|1|0.06|ENSG00000148843|chr10:103438751-103438751|A/-|frameshift_variant'] 29946 7241 FWDKLIFAK True NCI_RA007_Epitope_Rep2 1166.64881625034 1166.64718490379 32.785 3 -0.46644720993083755 0.13134038239187626 0.9319316663960688 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 78567 6241 NYQKRFQNL True PC9_epitope_Rep6 1209.6254550368096 1209.62380490379 32.492 3 -0.46646721389155676 0.13134038239187626 0.9319456492031479 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 95063 7724 RTTFVVGG True NCI_RA007_Epitope_Rep2 835.4552018242298 835.45410993586 34.672 2 -0.4664722479332899 0.13134038239187626 0.9319491674484089 ['ENST00000397722.5_1_16:450423-450627:+|nuORF'] 33883 8351 GLPRSDVL True PC9_epitope_Rep5 855.48141657207 855.48030993586 37.063 2 -0.4665083177712972 0.13134038239187626 0.9319743697453656 ['ENSG00000205138|ENST00000378887|SDHAF1'] 139355 11997 YLLQKMKSI True PC9_epitope_Rep5 1122.64710199818 1122.64546490379 51.141 3 -0.4665416338264652 0.13134038239187626 0.9319976376980604 ['ADAMTS6|p.I158Tfs*17|1|0.07|ENSG00000049192|chr5:65460328-65460329|-/GTATAGTAAGG|frameshift_variant'] 79959 13128 PETEDVQGLYM True H1975_Epitope_Rep1 1280.55946876224 1280.5583699358601 55.59 2 -0.46664547490493835 0.1314030060825416 0.9320700972777503 ['ENST00000561017.1_1_15:80414070-80415156:+|nuORF'] 58280 4996 LELSKFRMPQP True H1975_Epitope_Rep3 1344.72239219676 1344.72073490379 24.346 3 -0.46666285235937616 0.1314030060825416 0.9320822138236173 ['ENSG00000160194|ENST00000354250|NDUFV3', 'nc|ENSG00000160194|P56181|NDUFV3'] 68456 12658 LTFAYERLL True PC9_epitope_Rep5 1124.62299542532 1124.6213549037902 53.693 3 -0.46668329141233905 0.13141535832174395 0.9320964616730132 ['HEXA|p.S501L|1|0.32|ENSG00000213614|chr15:72345470-72345470|G/A|missense_variant'] 111516 10433 TIADTFQEQ True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 45.19 2 -0.4666906974013694 0.13141535832174395 0.9321016233990634 ['ENSG00000132950|ENST00000337963|ZMYM5', 'nc|ENSG00000132950|Q9UJ78-5|ZMYM5', 'ENST00000382909.5_1_13:20398619-20425669:-|nuORF'] 126407 5100 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 26.314 3 -0.46673438577669374 0.1314444649230099 0.9321320628737567 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 25247 14353 FDIRRCWAR True H1975_Epitope_Rep2 1221.61893018773 1221.61729490379 60.358 3 -0.46673775902269976 0.1314444649230099 0.9321344124511605 ['ENST00000569299.1_1_16:66968069-66968324:-|nuORF'] 78595 13355 NYSNIRFQF True NCI_RA007_Epitope_Rep1 1187.57235683479 1187.5712499358601 55.952 2 -0.4667493031795037 0.1314568149451286 0.9321424525782785 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 135309 10419 WFWWYWQKEKI True H1975_Epitope_Rep3 1698.8347195270596 1698.83362993586 45.135 2 -0.46678640394864096 0.1314568149451286 0.9321682840882474 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 117606 7481 TVTDKDQP True H1975_Epitope_Rep3 902.4345259493 902.43342993586 33.757 2 -0.46680277428172895 0.1314691641395949 0.9321796781173818 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 49723 19249 KGQVLRRV True PC9_epitope_Rep3 954.6086827738599 954.60758993586 79.263 2 -0.4668044964560663 0.1314691641395949 0.9321808766425794 ['ENST00000585047.5_1_17:38218205-38233770:+|nuORF', 'ENST00000577486.1_1_17:38228403-38233770:+|nuORF', 'ENST00000584985.5_1_17:38219164-38233770:+|nuORF'] 62312 10650 LLGC[Carbamidomethyl]EIDD True H1975_Epitope_Rep3 933.4113482559999 933.4107949679301 46.039 1 -0.466951911621259 0.13154852652917623 0.9322833715724201 ['ENST00000556703.1_1_14:57507861-57508260:+|nuORF'] 39559 7272 HLGKVSKP True H1975_Epitope_Rep2 864.51813643396 864.51702993586 32.907 2 -0.4669938738880905 0.13154852652917623 0.9323125122015592 ['ENSG00000179981|ENST00000580243|TSHZ1', 'nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1'] 12837 5971 DLGPASAPA True H1975_Epitope_Rep3 797.3919328613299 797.3913849679301 27.978 1 -0.4670001839360356 0.13155866782818468 0.9323168928674095 ['ENST00000578295.5_1_17:29159009-29159327:+|nuORF'] 112554 11811 TLEELNTVL True PC9_epitope_Rep4 1030.55464108198 1030.55354993586 53.197 2 -0.46701335495534857 0.13155866782818468 0.9323260355446692 ['nc|ENSG00000167419|P22079-2|LPO', 'ENSG00000167419|ENST00000262290|LPO'] 98315 10787 SEVRPTTSL True PC9_epitope_Rep2 988.5189242796 988.51782993586 46.809 2 -0.46701706586238734 0.13155866782818468 0.932328611200013 ['ENST00000263256.6_1_22:41999317-42003291:-|nuORF'] 27191 17465 FLLPRHHL True PC9_epitope_Rep4 1031.6028691174301 1031.6017699358601 75.176 2 -0.4670796107485904 0.13156880810788174 0.9323720040038262 ['ENST00000328914.4_1_7:4802311-4802611:+|nuORF'] 84806 10147 QEAEAWLN True H1975_Epitope_Rep3 959.4348603024699 959.43376993586 44.074 2 -0.46708157363599234 0.13156880810788174 0.9323733652740325 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 121418 13467 VEVTHNFQV True PC9_epitope_Rep4 1071.5349086969102 1071.53380993586 59.697 2 -0.46709637273075966 0.13156880810788174 0.9323836274188176 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 119242 12873 VALFQQLATA True PC9_epitope_Rep5 1060.59169529704 1060.5905899358602 54.526 2 -0.4672282084299576 0.13157894736842105 0.9324749617697095 ['nc|ENSG00000049239|O95479-2|H6PD', 'ENSG00000049239|ENST00000377403|H6PD'] 29263 11135 FVADGIFK True NCI_RA007_Epitope_Rep5 895.4803539429099 895.47924993586 49.466 2 -0.46723485283644606 0.13157894736842105 0.9324795609230511 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 97768 10441 SEIVCLAVPPP True H1975_Epitope_Rep2 1123.5947320721498 1123.59362993586 45.176 2 -0.4672409583176846 0.13157894736842105 0.9324837867011185 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 118595 20073 TYRFCDNVWTF True PC9_epitope_Rep5 1450.6339711151797 1450.63231490379 82.265 3 -0.46727745646320246 0.13162699542705908 0.9325090413273521 ['ENSG00000140307|ENST00000396060|GTF2A2', 'ENST00000267869.8_1_15:59931333-59949661:-|nuORF'] 45972 11694 ISERTPSAL True PC9_epitope_Rep2 972.52400966004 972.52290993586 50.312 2 -0.4673165306769531 0.13164154103852596 0.9325360655710762 ['ENSG00000109107|ENST00000226253|ALDOC'] 64560 15709 LPSDWSYTL True PC9_epitope_Rep4 1080.5127762700001 1080.51166993586 68.351 2 -0.46735759566535495 0.13165167579518616 0.9325644523257629 ['ENSG00000159208|ENST00000290363|CIART'] 116554 15706 TTVKEQAFTI True PC9_epitope_Rep3 1136.607739284 1136.60664993586 65.562 2 -0.46736328819661943 0.13165167579518616 0.932568386209926 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2'] 15044 7475 DYNENGSNFSK True NCI_RA007_Epitope_Rep2 1273.52110910757 1273.5200099358601 33.704 2 -0.46736419161820264 0.13165167579518616 0.9325690105030711 ['ENSG00000198105|ENST00000395867|ZNF248'] 64401 12323 LPLSSLEPA True H1975_Epitope_Rep1 925.51204799401 925.51094993586 52.428 2 -0.4673972832187173 0.13167414751792056 0.9325918729612137 ['ENSG00000006062|ENST00000344686|MAP3K14', 'ENST00000592267.1_1_17:43342005-43351146:-|nuORF'] 12391 9662 DISSYVKE True NCI_RA007_Epitope_Rep1 939.45492704071 939.45382993586 41.581 2 -0.4674030478827139 0.13167414751792056 0.9325958547013291 ['ENST00000374994.8_2_9:101915367-101915715:+|nuORF'] 15280 16475 EAEVLFTP True H1975_Epitope_Rep2 904.4541987647199 904.45310993586 68.588 2 -0.4674403950333034 0.13167414751792056 0.9326216439415744 ['ENSG00000132854|ENST00000371153|KANK4'] 116961 13001 TVGGTIYCLI True PC9_epitope_Rep5 1038.5419682232998 1038.5408699358602 55.017 2 -0.4674440253096825 0.13167414751792056 0.9326241501014474 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 64471 18654 LPPWSQVSL True PC9_epitope_Rep1 1025.5545815123298 1025.5534899358602 76.541 2 -0.4674497622704814 0.13167414751792056 0.9326281103766683 ['ENST00000490691.1_1_3:4345308-4357963:+|nuORF'] 71554 4860 MAQTDPETND True PC9_epitope_Rep3 1120.43426824912 1120.4331699358602 23.792 2 -0.4674963246325016 0.131688690147214 0.9326602422179783 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 356 7868 AAKDAEKIREL True NCI_RA007_Epitope_Rep1 1242.6932002434598 1242.6915449037901 34.596 3 -0.46750655035564903 0.13171777394449935 0.9326672962840337 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 104489 16727 SQLTGVAAI True PC9_epitope_Rep5 858.4810822188999 858.47998993586 69.347 2 -0.467510317865821 0.13171777394449935 0.9326698950173324 ['ENSG00000152684|ENST00000274311|PELO'] 13535 6537 DNVGFNVK True NCI_RA007_Epitope_Rep3 891.44503106335 891.44392993586 32.757 2 -0.4676004865895538 0.1317323151125402 0.9327320544133254 ['ENSG00000156508|ENST00000309268|EEF1A1', 'ENSG00000101210|ENST00000217182|EEF1A2'] 42626 6882 IEGVEHLPRR True PC9_epitope_Rep5 1204.66765420196 1204.66600490379 31.442 3 -0.46760870237250457 0.13174685579354578 0.932737714607224 ['ENSG00000175595|ENST00000311895|ERCC4', 'ENST00000576348.1_1_16:14014055-14020614:+|nuORF', 'nc|ENSG00000175595|Q92889-2|ERCC4'] 988 5844 AEAAAVAGL True NCI_RA007_Epitope_Rep3 771.41266830591 771.41211496793 29.966 1 -0.4676312997533982 0.1317613959875406 0.9327532798681399 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2', 'ENST00000372343.7_1_1:44412628-44412673:+|nuORF'] 72597 12808 MLSGPRRAEI True PC9_epitope_Rep5 1128.60736244452 1128.60571490379 54.277 3 -0.46763715343877954 0.1317759356945491 0.9327573112141356 ['ENST00000454547.1_1_1:19209079-19212092:-|nuORF', 'ENST00000494072.3_3_1:19209920-19216616:-|nuORF', 'nc|ENSG00000159423|P30038-2|ALDH4A1', 'nc|ENSG00000159423|P30038-3|ALDH4A1', 'ENSG00000159423|ENST00000375341|ALDH4A1'] 98392 14805 SFCHYYYF True H1975_Epitope_Rep2 1128.43750315476 1128.4364099358602 62.105 2 -0.46775629106577515 0.13182396677607341 0.9328392951829781 ['ENSG00000175893|ENST00000380916|ZDHHC21'] 46254 14309 ISNYAELV True H1975_Epitope_Rep3 907.4650978015899 907.46454496793 60.385 1 -0.4677824494227892 0.13183850494833968 0.9328572795238009 ['nc|ENSG00000173482|P28827|PTPRM', 'ENSG00000173482|ENST00000580170|PTPRM'] 32898 9028 GHTYHINSI True PC9_epitope_Rep1 1040.5039429218 1040.50284993586 39.576 2 -0.4678582117332493 0.13186537173476223 0.932909334204878 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 22094 8310 ESPLSVSSP True H1975_Epitope_Rep2 901.43927697657 901.43816993586 36.916 2 -0.46795339997338625 0.13186537173476223 0.9329746660254918 ['nc|ENSG00000145725|O43314-2|PPIP5K2', 'ENSG00000145725|ENST00000358359|PPIP5K2'] 75902 11073 NLQTVNVDEN True PC9_epitope_Rep1 1144.53603089572 1144.53547496793 47.48 1 -0.46796700120850926 0.13186537173476223 0.932983994786758 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 18486 11063 EKEQNKRLWDR True H1975_Epitope_Rep3 1500.7797238320798 1500.7786299358602 47.645 2 -0.4680053276944716 0.13187770001004656 0.9330102734647331 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158'] 46221 2957 ISNIEDLPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 15.617 2 -0.4680244708418631 0.13187770001004656 0.9330233943067149 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 18910 9863 ELEEALNFIN True NCI_RA007_Epitope_Rep1 1190.5819184589798 1190.58082993586 42.367 2 -0.46803421877906015 0.1318900274596477 0.9330300744011897 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 100106 8919 SISKYCFYK True PC9_epitope_Rep1 1137.5528672601697 1137.5512349037901 39.148 3 -0.4680481563104442 0.1318900274596477 0.933039624138199 ['ENST00000534336.1_1_11:65270417-65270489:+|nuORF'] 86779 14296 QLLTECLVLS True PC9_epitope_Rep5 1117.6052967558498 1117.6041899358602 59.993 2 -0.4681422988488626 0.13193584033754144 0.9331040852899676 ['ENST00000236412.11_1_1:28157683-28169749:+|nuORF'] 61345 15341 LISGTNWQSI True PC9_epitope_Rep5 1117.57677350889 1117.57566993586 64.019 2 -0.4681572032408163 0.13193584033754144 0.9331142836532329 ['ENST00000304552.4_1_3:45984986-45987984:+|nuORF'] 3705 4428 AGRRWGQARP True NCI_RA007_Epitope_Rep5 1153.6217070690495 1153.62007490379 23.668 3 -0.46827462345578286 0.13196490758103402 0.9331945623520672 ['ENST00000573951.1_1_16:3313772-3314576:+|nuORF'] 44825 15332 INDNPEPAI True PC9_epitope_Rep6 981.4767251144499 981.47562993586 71.103 2 -0.46828480502088515 0.13196490758103402 0.9332015178165836 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'ENST00000309900.11_1_16:70928350-70955090:-|nuORF'] 82281 4857 PPGPGGGTL True NCI_RA007_Epitope_Rep3 751.38645355807 751.38534993586 26.09 2 -0.46843970963597864 0.13201292504478562 0.9333072309790772 ['ENST00000430109.1_1_1:1369598-1369895:-|nuORF'] 107178 18375 SVILASVSVI True PC9_epitope_Rep4 986.60119735158 986.60010993586 78.745 2 -0.46857311568933874 0.13205872997271098 0.9333981093404061 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 73245 4479 MSEDKPQDY True H1975_Epitope_Rep3 1111.44919003727 1111.44808993586 22.346 2 -0.4685857423403588 0.13205872997271098 0.9334067030078436 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 100175 7259 SITTDDWKDF True NCI_RA007_Epitope_Rep3 1226.54553295026 1226.54389490379 35.664 3 -0.46872471842578145 0.13212127299817522 0.933501200701799 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'chr12:96029185-96043289|350|16.7|0.34|5.63|-|ENST00000552789|LTA4H,LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 65554 27129 LRRRRFKMRRM True PC9_epitope_Rep3 1604.9456415553998 1604.9440049037898 111.61 3 -0.46873129030950256 0.13212127299817522 0.9335056652566657 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 110677 7398 TGANVILTTG True PC9_epitope_Rep4 945.51311062317 945.51200993586 35.803 2 -0.4687836004578901 0.13216264626613322 0.933541188730199 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000414406.2_1_12:20095069-20095366:+|nuORF'] 93082 7379 RPNDSRMLVA True PC9_epitope_Rep3 1157.59752603681 1157.59588490379 33.393 3 -0.4687887219389131 0.13216264626613322 0.9335446654536051 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 131867 7749 VTREPLGLG True PC9_epitope_Rep6 940.5341804209198 940.53308993586 39.165 2 -0.4687888954448301 0.13216264626613322 0.9335447832344282 ['RP1L1|p.V612G|1|0.12|ENSG00000183638|chr8:10612263-10612263|A/C|missense_variant'] 125337 17767 VIPSSVPNI True PC9_epitope_Rep4 924.52803241132 924.52692993586 76.367 2 -0.46882275074226504 0.13216264626613322 0.9335677603325219 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 83850 9529 PVMAIRNKMI True PC9_epitope_Rep5 1171.65695548923 1171.65529490379 41.612 3 -0.4688463605886975 0.13217717365830794 0.933583778276891 ['ENST00000541569.5_1_12:102419750-102455740:-|nuORF', 'ENSG00000120860|ENST00000240079|WASHC3'] 65585 10237 LRSWWPRWWWA True NCI_RA007_Epitope_Rep5 1628.8153214951599 1628.81422993586 46.007 2 -0.4688568505473299 0.13220844004754012 0.9335908936139238 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 14580 6657 DTWESLQK True NCI_RA007_Epitope_Rep2 1005.47672511445 1005.4761749679301 30.506 1 -0.4688958304850577 0.13223749183977504 0.9336173255832703 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 893 7747 ADLAGELR True H1975_Epitope_Rep3 843.4450310633499 843.44392993586 34.781 2 -0.4689071148115411 0.13223749183977504 0.9336249750044802 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 871 7519 ADGSGSVV True H1975_Epitope_Rep1 690.3184335679 690.31788496793 33.919 1 -0.4689692063146862 0.13230223293495363 0.9336670464514885 ['ENSG00000123384|ENST00000243077|LRP1'] 44871 5549 INISEGNC[Carbamidomethyl]PER True NCI_RA007_Epitope_Rep5 1287.58774947818 1287.5866499358601 28.03 2 -0.4689987497401801 0.13231454204606322 0.9336870528688074 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 111015 10366 THDDSHLVSL True PC9_epitope_Rep3 1122.5305515924601 1122.5294499358602 44.816 2 -0.4690323337318207 0.13231454204606322 0.9337097866054334 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 100239 14109 SIWLWQLHP True H1975_Epitope_Rep2 1178.62366413166 1178.6225699358602 59.425 2 -0.4692583702357288 0.13247748803267165 0.9338625498000211 ['ENST00000447544.6_2_7:80290452-80292345:+|nuORF'] 99690 16471 SIHDVTFQV True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 68.354 2 -0.46926931514875775 0.13247748803267165 0.9338699358996883 ['nc|ENSG00000005700|Q9P2D0-2|IBTK', 'ENST00000369751.2_1_6:82901346-82950269:-|nuORF', 'ENSG00000005700|ENST00000306270|IBTK'] 86429 5891 QKKKKKKKK True NCI_RA007_Epitope_Rep4 1170.8288463009796 1170.82720490379 29.282 3 -0.4693180738224303 0.13250874520896447 0.9339028282064152 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 36318 23300 GVEKFLEL True PC9_epitope_Rep3 933.5171333744498 933.51602993586 94.904 2 -0.46937192787154286 0.13255673830086362 0.9339391347744848 ['ADAM10|p.N428*|1|0.21|ENSG00000137845|chr15:58627778-58627779|-/A|frameshift_variant', 'ADAM10|p.N449Kfs*5|1|0.11|ENSG00000137845|chr15:58627712-58627713|TG/-|frameshift_variant', 'ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 98314 23578 SEVRLRKG True PC9_epitope_Rep4 943.5563128478299 943.55520993586 98.999 2 -0.46938278431831554 0.13258355508694414 0.9339464508937526 ['ENST00000361264.8_1_9:34126412-34126766:-|nuORF'] 65558 27551 LRRRRFKMRRM True PC9_epitope_Rep5 1604.9456415553998 1604.9440049037898 113.19 3 -0.46938417387626913 0.13258355508694414 0.9339473872408233 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 116975 7676 TVGLVSSTGPG True H1975_Epitope_Rep3 973.50802524273 973.50692993586 34.508 2 -0.4694091734508768 0.13258355508694414 0.9339642303386557 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant'] 139786 16799 YPGLQITDSY True H1975_Epitope_Rep2 1155.54480467427 1155.54370993586 69.865 2 -0.46941679451319407 0.13259363389898585 0.9339693638828117 ['ENSG00000197953|ENST00000356517|AADACL2'] 34035 9322 GLVKSNSVP True PC9_epitope_Rep2 899.5076313199099 899.50652993586 41.196 2 -0.4695841724970805 0.13259363389898585 0.934081987818007 ['ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 12164 11642 DIEMMLLL True PC9_epitope_Rep6 976.4973265299999 976.49622993586 55.903 2 -0.4695882573408217 0.13259363389898585 0.9340847334854492 ['ENST00000261590.12_1_18:29126842-29127004:+|nuORF'] 68963 11323 LTPEQLEAV True H1975_Epitope_Rep2 998.5284263341399 998.5273299358599 48.603 2 -0.46964537277907026 0.13267064946366117 0.9341231096871032 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 100531 7714 SLAVCEESPP True H1975_Epitope_Rep3 1030.4641118254199 1030.46300993586 34.655 2 -0.46966426519969373 0.13267064946366117 0.9341357976648502 ['nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1'] 88097 23888 QRRRLHRRRRS True PC9_epitope_Rep3 1575.9519235940297 1575.95026490379 97.172 3 -0.46966613224413506 0.13267064946366117 0.934137051394344 ['ENST00000215832.10_1_22:22221790-22221904:-|nuORF'] 129744 23120 VRQLRHLHRTR True PC9_epitope_Rep4 1470.8756303359398 1470.8745299358602 97.15 2 -0.46967320706421806 0.13267628258759748 0.9341418019086896 ['nc|ENSG00000184274|P59091|LINC00315'] 20767 4412 EQGFHRLPP True H1975_Epitope_Rep3 1079.55122746739 1079.55012993586 22.093 2 -0.4696948035822571 0.13267628258759748 0.9341563007125063 ['RIN1|p.Y681F|1|0.21|ENSG00000174791|chr11:66332586-66332586|T/A|missense_variant'] 16034 12366 EDVDAAFLSRD True PC9_epitope_Rep2 1236.56224564356 1236.5611499358602 52.875 2 -0.46973691632085957 0.13267628258759748 0.9341845619586289 ['ENST00000460579.5_1_2:219527197-219528106:+|nuORF', 'ENSG00000074582|ENST00000359273|BCS1L'] 95520 25627 RWRHRRPR True PC9_epitope_Rep1 1218.70710845886 1218.70600993586 103.6 2 -0.46978068974775616 0.13267628258759748 0.9342139221191533 ['ENST00000293780.4_1_17:4804403-4804460:-|nuORF'] 42664 8178 IEHSPTTIP True H1975_Epitope_Rep1 993.5131106231701 993.51200993586 36.397 2 -0.4698230683417681 0.13267628258759748 0.9342423316356478 ['nc|ENSG00000047849|P27816-3|MAP4'] 3196 13676 AGEHHSPSSL True PC9_epitope_Rep1 1020.46247203264 1020.46136993586 57.458 2 -0.4698437542680432 0.13270308709110684 0.9342561935600794 ['TBX19|p.G439E|1|0.25|ENSG00000143178|chr1:168312971-168312971|G/A|missense_variant'] 76518 21945 NQILHILFV True PC9_epitope_Rep1 1095.64406522307 1095.64296993586 89.229 2 -0.46984872675089207 0.13270308709110684 0.9342595251627831 ['ENSG00000126773|ENST00000406854|PCNX4'] 38617 15421 HFEVAELL True PC9_epitope_Rep5 956.4967322830398 956.49562993586 64.326 2 -0.4698550614044646 0.13270308709110684 0.934263769135029 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'ENST00000497613.2_1_8:145658938-145666334:-|nuORF'] 58542 12805 LEQKFHSI True PC9_epitope_Rep1 1000.5341804209199 1000.53308993586 54.128 2 -0.4698994019306896 0.13271315754249766 0.9342934662991568 ['ENST00000450453.6_2_1:163292807-163295872:+|nuORF'] 118890 11499 VADFPEKDCPV True H1975_Epitope_Rep1 1218.55907483942 1218.55796993586 49.215 2 -0.46991360870397536 0.13271315754249766 0.934302977886904 ['ENST00000440760.5_1_2:27594325-27599583:+|nuORF', 'nc|ENSG00000115234|Q15036-2|SNX17', 'ENSG00000115234|ENST00000233575|SNX17'] 15185 8128 EAAVVAAAV True H1975_Epitope_Rep1 799.4439684341899 799.44286993586 36.203 2 -0.46992892507396483 0.13271315754249766 0.9343132304980157 ['ENSG00000154174|ENST00000284320|TOMM70'] 102587 19888 SLWCRVRVP True PC9_epitope_Rep2 1114.6069685216999 1114.60586993586 81.892 2 -0.46994295178459955 0.13272766818919507 0.9343226181294565 ['ENSG00000161692|ENST00000315005|DBF4B'] 3407 19780 AGILPVMQ True PC9_epitope_Rep5 827.4575103233501 827.45640993586 81.129 2 -0.46999953793680643 0.132742178350343 0.9343604729889785 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ABCA2|p.R973Afs*36|1|0.26|ENSG00000107331|chr9:137016581-137016581|C/-|frameshift_variant', 'ENST00000494046.5_1_9:139914760-139922592:-|nuORF', 'ENST00000492260.5_1_9:139917391-139922592:-|nuORF', 'ENST00000398207.8_1_9:139916273-139923324:-|nuORF', 'ENST00000476211.5_1_9:139916273-139923324:-|nuORF'] 16746 5313 EESTDLVP True NCI_RA007_Epitope_Rep1 888.4076424951198 888.40654993586 24.747 2 -0.4700415470994851 0.13275224599735666 0.9343885591293208 ['ENST00000493228.1_1_10:72647900-72647975:-|nuORF'] 130144 9597 VSDSMRTASL True PC9_epitope_Rep1 1065.51245900017 1065.51136993586 41.77 2 -0.470066094502252 0.13275224599735666 0.9344049641132209 ['ENSG00000177311|ENST00000321464|ZBTB38'] 64645 12993 LPTSGAAATAA True PC9_epitope_Rep5 929.4818104948899 929.48070993586 54.987 2 -0.47006767119775617 0.13275224599735666 0.9344060176466553 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 20992 5708 EQRERERWQR True H1975_Epitope_Rep1 1471.7392560024298 1471.73761490379 27.024 3 -0.47008335795241063 0.13276675477632416 0.9344164982793512 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 122422 7252 VGDVFRGG True NCI_RA007_Epitope_Rep4 805.4082516318099 805.40714993586 34.53 2 -0.4701394298305834 0.13277904175588864 0.9344539444950243 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 104336 14481 SQIREMETL True PC9_epitope_Rep2 1105.54375912845 1105.5426699358602 60.97 2 -0.4701612551291523 0.13277904175588864 0.9344685130040541 ['ENSG00000157456|ENST00000288207|CCNB2'] 29221 5619 FTTTQGKA True NCI_RA007_Epitope_Rep1 852.4341320264798 852.43302993586 25.919 2 -0.4701631293624946 0.132782442875782 0.9344697638831393 ['ENSG00000213967|ENST00000594466|ZNF726'] 105984 15777 SSTDQSEDKIW True PC9_epitope_Rep5 1294.56772494682 1294.5660749037902 65.679 3 -0.4701828241370044 0.132782442875782 0.9344829065995282 ['ENSG00000178695|ENST00000377474|KCTD12'] 110153 18976 TENVVQLIN True PC9_epitope_Rep5 1028.5502244078798 1028.5496749679298 78.018 1 -0.47018571972308176 0.132782442875782 0.9344848386138069 ['nc|ENSG00000135299|Q9Y2G4-4|ANKRD6', 'nc|ENSG00000135299|Q9Y2G4-3|ANKRD6', 'ENSG00000135299|ENST00000339746|ANKRD6', 'nc|ENSG00000135299|Q9Y2G4-1|ANKRD6'] 94530 21943 RRRRTRKSWLG True PC9_epitope_Rep6 1470.8756303359398 1470.87397490379 97.316 3 -0.4701992343790211 0.132782442875782 0.9344938550532157 ['AP3D1|p.V607Wfs*107|1|0.26|ENSG00000065000|chr19:2117263-2117263|T/-|frameshift_variant'] 58611 18566 LEQTNILC True PC9_epitope_Rep3 932.4637179025999 932.46262993586 76.637 2 -0.4702075720574492 0.132782442875782 0.9344994168731425 ['ENST00000380773.8_2_6:2785591-2785759:+|nuORF'] 4519 4930 AKFSRPAQL True NCI_RA007_Epitope_Rep5 1016.5767139392399 1016.57560993586 25.664 2 -0.470218215210607 0.132782442875782 0.9345065157798242 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 75847 9621 NLPNVNLPKVP True H1975_Epitope_Rep3 1203.6975573479099 1203.69646993586 42.022 2 -0.470261358908647 0.13279694896542496 0.9345352828138229 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS'] 47490 7795 IVQCQLLMLRV True NCI_RA007_Epitope_Rep5 1314.75158415006 1314.75048993586 36.686 2 -0.4703472686815895 0.13289286610353768 0.9345925197356962 ['ENST00000428076.1_1_13:19956755-19957193:+|nuORF', 'ENST00000435741.1_1_Y:28772724-28773147:-|nuORF'] 98284 10413 SEVLRTVQP True PC9_epitope_Rep1 1027.56620882519 1027.5651099358602 44.938 2 -0.47037046803007554 0.13289286610353768 0.9346079658314336 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 88096 23967 QRRRLHRRRRS True PC9_epitope_Rep2 1575.9519235940297 1575.95026490379 97.68 3 -0.47043258200866145 0.13291742628242653 0.934649299605388 ['ENST00000215832.10_1_22:22221790-22221904:-|nuORF'] 43257 17328 IFPQETHTL True PC9_epitope_Rep6 1084.55530978832 1084.5542099358602 79.265 2 -0.47046934070037666 0.13291742628242653 0.9346737458691726 ['ENST00000581549.1_1_17:70599848-70614472:-|nuORF'] 137822 9210 YERAEWRENIR True H1975_Epitope_Rep1 1520.7484237037995 1520.74678490379 40.335 3 -0.4704823456685626 0.13291742628242653 0.9346823921488446 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000487968.5_1_22:23626151-23631864:+|nuORF'] 13128 16911 DLQVRRIHP True H1975_Epitope_Rep2 1132.6465248345598 1132.6454299358602 70.295 2 -0.4704982048049287 0.13291742628242653 0.9346929341413435 ['ENST00000339626.5_1_13:41194051-41194435:+|nuORF'] 59175 6274 LFASEGQPGKP True H1975_Epitope_Rep3 1129.57677350889 1129.57566993586 29.14 2 -0.4705330272664638 0.1329297051395695 0.9347160743773831 ['nc|nan|Q9H0W9-3|C11orf54'] 79788 19553 PEEFVKFQF True PC9_epitope_Rep4 1169.57571087973 1169.57460993586 83.332 2 -0.4705356319973415 0.1329297051395695 0.9347178048773684 ['ENSG00000149403|ENST00000527524|GRIK4', 'ENST00000533291.5_1_11:120531027-120833419:+|nuORF'] 69726 17157 LVEQSHVVL True PC9_epitope_Rep5 1022.5760452328998 1022.57494993586 71.016 2 -0.47056750606085107 0.13294198317528808 0.9347389765157312 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY', 'ENST00000591753.1_2_17:40715869-40717983:+|nuORF'] 123991 6979 VGSDVRDWCSP True H1975_Epitope_Rep2 1219.5291716934698 1219.52752490379 31.766 3 -0.4705773919287244 0.13294198317528808 0.9347455413046765 ['nc|ENSG00000162066|Q9Y303-3|AMDHD2'] 57596 7538 LEEAAHDSSP True H1975_Epitope_Rep3 1054.45671794586 1054.45562993586 33.977 2 -0.4706669128926493 0.13295648392815332 0.934804952248626 ['ENST00000372067.7_1_6:43753251-43753332:+|nuORF'] 126872 14902 VLQGNPLALVP True PC9_epitope_Rep1 1119.6651945904698 1119.6640899358601 62.14 2 -0.4707327836101964 0.13307132703403293 0.9348486260656296 ['ENSG00000158113|ENST00000339777|LRRC43', 'nc|ENSG00000158113|Q8N309-2|LRRC43', 'nc|ENSG00000158113|Q8N309-3|LRRC43'] 18206 9494 EIMAPCLI True H1975_Epitope_Rep2 888.44489703432 888.44378993586 41.487 2 -0.4707479346123243 0.1330835995116812 0.934858666555441 ['ENST00000379997.7_1_9:27561302-27561452:-|nuORF'] 12891 9811 DLIPAPADP True PC9_epitope_Rep1 907.46509780159 907.46400993586 42.6 2 -0.47078224552629405 0.1330835995116812 0.9348813973436505 ['FCHO1|p.M545I|1|0.08|ENSG00000130475|chr19:17781238-17781238|G/T|missense_variant'] 140473 13624 YRIREFRQTFR True NCI_RA007_Epitope_Rep2 1570.84807817542 1570.84642490379 57.634 3 -0.47087411301866916 0.13317503051788432 0.9349422121301756 ['ENSG00000128271|ENST00000337539|ADORA2A'] 136421 6252 WVASSELTSY True H1975_Epitope_Rep3 1141.52915461013 1141.52804993586 29.06 2 -0.47087632061708906 0.13317503051788432 0.9349436726846928 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF'] 80473 18853 PGLGIFGSTS True PC9_epitope_Rep5 934.47599683846 934.47544496793 77.536 1 -0.47090212851045316 0.13317503051788432 0.934960744352386 ['ENSG00000178607|ENST00000433197|ERN1', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 3028 16819 AFPFQVEVL True PC9_epitope_Rep4 1048.5593325395998 1048.55822993586 72.666 2 -0.4709164957645441 0.13317503051788432 0.9349702458183897 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'ENST00000609587.1_1_18:2728435-2728615:+|nuORF', 'SMCHD1-NDC80|5|fusion'] 127985 8999 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48561496793 44.639 1 -0.47095616817808983 0.1331872982960721 0.9349964736381567 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 64547 12065 LPRSSPAELT True PC9_epitope_Rep4 1069.5767735088898 1069.57566993586 54.215 2 -0.4709663148774274 0.1331872982960721 0.9350031796804623 ['nc|ENSG00000135502|Q8NG04|SLC26A10P', 'nc|ENSG00000135502|Q8NG04-2|SLC26A10P'] 66511 9688 LSHLHQTV True PC9_epitope_Rep5 933.50321464581 933.50210993586 42.232 2 -0.47104579755268644 0.133235235101331 0.9350556817565027 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant', 'nc|ENSG00000198198|Q5T011-7|SZT2'] 15912 10070 EDLELYVSRNN True NCI_RA007_Epitope_Rep1 1350.6415585934199 1350.6404699358602 43.18 2 -0.4710787256866507 0.13326644929353734 0.9350774174413066 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 69819 17671 LVGPVLGAA True PC9_epitope_Rep1 795.4854393233499 795.48434993586 72.766 2 -0.4710983150949801 0.13329543364489108 0.935090344164748 ['nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 22193 5112 ESVKNQDP True H1975_Epitope_Rep2 915.42977492203 915.42866993586 24.743 2 -0.471106046507245 0.13329543364489108 0.9350954451449297 ['nc|ENSG00000171533|Q96JE9-3|MAP6', 'ENSG00000171533|ENST00000304771|MAP6'] 29052 21653 FTFGAEVVA True PC9_epitope_Rep2 939.4701831820298 939.46963496793 88.764 1 -0.4711979136479218 0.13337680577849118 0.9351560198661953 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENST00000532279.1_1_11:67166350-67167062:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 11182 8334 DDSDPFSFDGP True H1975_Epitope_Rep2 1197.44621283181 1197.44510993586 37.008 2 -0.47122752498452114 0.13338906537368334 0.9351755303404452 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1'] 3050 9208 AFSKDLPRAV True NCI_RA007_Epitope_Rep2 1102.61349337078 1102.6123899358602 40.426 2 -0.4712744918789154 0.13338906537368334 0.9352064617109241 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF', 'ENST00000444457.5_1_7:102938385-102969496:+|nuORF', 'ENSG00000105819|ENST00000249269|PMPCB', 'ENST00000443722.5_1_7:102939135-102952660:+|nuORF', 'PMPCB|p.H233Ifs*6|1|0.07|ENSG00000105819|chr7:103304451-103304454|CATT/-|frameshift_variant', 'PMPCB|p.T232Nfs*8|1|0.08|ENSG00000105819|chr7:103304449-103304449|C/-|frameshift_variant', 'ENST00000498530.5_1_7:102937906-102949569:+|nuORF'] 59681 18713 LGANGKVAVIV True PC9_epitope_Rep2 1039.6389798426299 1039.6378899358601 77.351 2 -0.4714563659410752 0.1334013241490002 0.9353260733630503 ['ENSG00000275395|ENST00000616721|FCGBP', 'nc|ENSG00000275395|Q9Y6R7|FCGBP'] 134973 5666 WAWRWRQR True NCI_RA007_Epitope_Rep5 1243.6475278940698 1243.64587490379 28.482 3 -0.47148875885497077 0.1334013241490002 0.935347349213001 ['ENST00000478401.1_1_9:100872512-100881310:-|nuORF'] 56705 15465 LDLAQRTLYR True PC9_epitope_Rep1 1247.69861997707 1247.69698490379 64.307 3 -0.4715036987695959 0.13341358210452403 0.9353571590123949 ['ENSG00000198131|ENST00000687789|ZNF544', 'ENST00000595560.1_1_19:58067392-58071050:-|nuORF', 'nc|ENSG00000251369|Q7Z398-2|ZNF550', 'ENSG00000251369|ENST00000699333|ZNF550', 'ENST00000596597.5_1_19:58757693-58758161:+|nuORF'] 72225 7102 MHDGNVITA True PC9_epitope_Rep3 956.43856578392 956.43746993586 32.326 2 -0.47151175697071096 0.13341358210452403 0.9353624494237411 ['ENST00000553691.5_1_14:77907431-77919723:-|nuORF', 'ENSG00000151445|ENST00000557658|VIPAS39', 'ENST00000555854.1_1_14:77906782-77910618:-|nuORF', 'nc|ENSG00000151445|Q9H9C1-2|VIPAS39'] 116745 18425 TVDNLGILYI True PC9_epitope_Rep6 1119.6175756917098 1119.61646993586 83.517 2 -0.47155654818888887 0.1334213781804808 0.9353918465463774 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 124928 16111 VHSEIPAFLL True NCI_RA007_Epitope_Rep1 1124.62299542532 1124.62188993586 66.773 2 -0.47157449149032493 0.1334213781804808 0.9354036185087973 ['nc|ENSG00000100150|O75140-8|DEPDC5', 'nc|ENSG00000100150|O75140-5|DEPDC5', 'nc|ENSG00000100150|O75140-1|DEPDC5', 'nc|ENSG00000100150|O75140-4|DEPDC5', 'nc|ENSG00000100150|O75140-9|DEPDC5', 'ENSG00000100150|ENST00000651528|DEPDC5'] 135739 6133 WLWRRRWSFFY True H1975_Epitope_Rep1 1701.8680853440096 1701.8664449037901 28.66 3 -0.471580113524228 0.1334213781804808 0.9354073063978234 ['ENST00000374500.9_1_6:33385885-33386053:-|nuORF'] 107937 13134 SVVTWIGYF True PC9_epitope_Rep4 1070.54368247546 1070.5425899358602 58.414 2 -0.47158939310799475 0.1334213781804808 0.9354133929814944 ['ENSG00000156097|ENST00000527748|GPR61'] 45454 13452 IQKNRRVVL True PC9_epitope_Rep5 1124.71421047156 1124.71255490379 56.759 3 -0.4717090686554909 0.13345035105315947 0.9354918281338672 ['nc|ENSG00000172663|Q9H6X4-2|TMEM134', 'nc|ENSG00000172663|Q9H6X4-3|TMEM134', 'ENSG00000172663|ENST00000308022|TMEM134'] 56014 23909 LASLQMQYTF True PC9_epitope_Rep2 1200.5848956644397 1200.58378993586 97.444 2 -0.4717122588052275 0.13345035105315947 0.935493917394929 ['ENST00000463727.1_1_10:129868414-129869560:+|nuORF'] 65183 9439 LQQQHRRLERE True H1975_Epitope_Rep1 1491.8018562589898 1491.80020490379 41.222 3 -0.4717520798322793 0.13347932198856607 0.9355199897860749 ['ENSG00000137877|ENST00000320955|SPTBN5'] 56140 14220 LAVKEKEL True PC9_epitope_Rep4 928.5593325395998 928.55822993586 62.605 2 -0.4718100840815945 0.13347932198856607 0.935557944938866 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant'] 101122 5600 SLGMWLKVP True H1975_Epitope_Rep3 1029.5681234014899 1029.56702993586 26.58 2 -0.47196142826861276 0.13353502599160913 0.9356568517363244 ['ENST00000496016.1_1_22:24487805-24487940:+|nuORF'] 53527 6586 KRLRKFGFR True NCI_RA007_Epitope_Rep5 1206.7461793061798 1206.74452490379 31.994 3 -0.47198283630450516 0.13353502599160913 0.9356708277442551 ['ABCB11|p.N1148Kfs*17|1|0.25|ENSG00000073734|chr2:168927312-168927330|TGAGCGGAGGAACTGGACA/-|frameshift_variant', 'ABCB11|p.G1308Efs*6|1|0.31|ENSG00000073734|chr2:168923667-168923667|T/-|frameshift_variant', 'ENSG00000073734|ENST00000650372|ABCB11'] 108452 15113 SYLQNVSLSL True PC9_epitope_Rep5 1122.59208921986 1122.59098993586 63.137 2 -0.4719875783785089 0.13353502599160913 0.9356739230670845 ['nc|ENSG00000111452|Q6QNK2-4|ADGRD1', 'ENSG00000111452|ENST00000261654|ADGRD1'] 116951 8670 TVGEITDALKK True H1975_Epitope_Rep1 1173.6605031328497 1173.6594099358601 38.278 2 -0.4720587330416926 0.13353502599160913 0.935720346975774 ['ENSG00000146085|ENST00000274813|MMUT'] 63583 14011 LMFCGCIEDY True H1975_Epitope_Rep2 1192.4602893982799 1192.4591899358602 59.042 2 -0.4720785890590044 0.13353502599160913 0.9357332946435682 ['nc|ENSG00000152092|O14525-3|ASTN1', 'ENSG00000152092|ENST00000361833|ASTN1', 'nc|ENSG00000152092|O14525|ASTN1', 'ASTN1|p.K691N|1|0.16|ENSG00000152092|chr1:176946102-176946102|C/A|missense_variant', 'ENST00000281881.7_1_1:176905297-177133812:-|nuORF'] 102623 12383 SLWPPFRCRWK True NCI_RA007_Epitope_Rep2 1474.76559442142 1474.7644899358602 52.773 2 -0.4721219978462573 0.13354504429216113 0.935761589731632 ['ENSG00000214711|ENST00000403897|CAPN14'] 100310 16596 SKIEWDTDQWK True PC9_epitope_Rep5 1434.6779441021397 1434.67630490379 68.842 3 -0.4721364486578752 0.13354504429216113 0.9357710058918763 ['ENSG00000176809|ENST00000584306|LRRC37A3', 'ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'SMURF2-LRRC37A3|2|fusion', 'SMURF2-LRRC37A3|1|fusion', 'ENST00000572638.1_1_17:44625595-44632942:+|nuORF'] 140118 9639 YQNTNVVFL True NCI_RA007_Epitope_Rep3 1096.5553097883198 1096.5542099358602 44.994 2 -0.4721811761279925 0.13354504429216113 0.9358001399336465 ['ABCC9|p.I832V|1|0.22|ENSG00000069431|chr12:21859597-21859597|T/C|missense_variant'] 98677 18385 SGEAISFFTG True PC9_epitope_Rep5 1014.46582607758 1014.4652749679301 75.736 1 -0.47220394206332805 0.1335762397419398 0.935814962893578 ['nc|ENSG00000121270|Q96J66-2|ABCC11', 'ENSG00000121270|ENST00000356608|ABCC11', 'ABCC11|p.N500Kfs*8|1|0.19|ENSG00000121270|chr16:48211056-48211056|G/-|frameshift_variant', 'ENST00000567385.5_1_16:48244807-48265838:-|nuORF', 'ABCC11|p.L661Cfs*29|1|0.31|ENSG00000121270|chr16:48200377-48200377|G/-|frameshift_variant'] 8172 9625 ATETHLNIY True H1975_Epitope_Rep2 1060.5189242795998 1060.5178299358602 41.999 2 -0.47227017118141046 0.1336074341489504 0.9358580616934107 ['ENSG00000074276|ENST00000261944|CDHR2'] 83717 12416 PVGGVGGQVQ True PC9_epitope_Rep5 896.4715801643599 896.4710349679301 52.758 1 -0.47231231427283293 0.13363639402346492 0.9358854685153332 ['WNK1|p.M1007V|1|0.14|ENSG00000060237|chr12:880907-880907|A/G|missense_variant'] 112651 6199 TLFLTERFQWT True PC9_epitope_Rep4 1440.7401504358797 1440.73849490379 30.883 3 -0.4723141162919893 0.13363639402346492 0.9358866401078801 ['ENST00000452811.1_2_2:80530600-80531496:-|nuORF'] 46285 15793 ISPTGWNNV True PC9_epitope_Rep5 986.4821448480601 986.48104993586 65.735 2 -0.4723496818315274 0.13364640606982303 0.9359097580283661 ['ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'nc|ENSG00000134955|Q8TED4-4|SLC37A2'] 133193 18583 VVRTRPGLQAP True H1975_Epitope_Rep2 1192.7040397106798 1192.70294993586 77.122 2 -0.4723574446592779 0.13364640606982303 0.9359148026184784 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'COL11A2|p.R121Pfs*24|1|0.45|ENSG00000204248|chr6:33189059-33189059|C/-|frameshift_variant', 'nc|ENSG00000204248|P13942-9|COL11A2'] 119344 8644 VAPASLATPSP True H1975_Epitope_Rep1 1009.54441075145 1009.54330993586 38.178 2 -0.4724492244618196 0.13364640606982303 0.9359744089784036 ['ENST00000462534.5_1_2:220415559-220417014:-|nuORF'] 64073 8112 LPATSSSLPSP True H1975_Epitope_Rep1 1055.54989005471 1055.5487899358602 36.147 2 -0.4724816158812936 0.13365865071274588 0.9359954298470331 ['ENSG00000277258|ENST00000620225|PCGF2'] 82067 17328 PMETSISSVIW True NCI_RA007_Epitope_Rep3 1248.60602503184 1248.60436490379 76.04 3 -0.47248396484898963 0.13365865071274588 0.9359969539239593 ['IL1RAPL1|p.R687M|1|0.47|ENSG00000169306|chrX:29955789-29955789|G/T|missense_variant'] 94164 24829 RRPFWKRRK True NCI_RA007_Epitope_Rep1 1328.8054255177997 1328.80487496793 102.78 1 -0.47250220739725296 0.13368537147822598 0.9360087887402232 ['nc|ENSG00000116698|Q92540-4|SMG7'] 18012 15405 EIECFTPPSP True PC9_epitope_Rep2 1118.4954119536999 1118.4943099358602 64.536 2 -0.4725078945209992 0.13368537147822598 0.9360124777188872 ['nc|ENSG00000168959|P41594-3|GRM5'] 125563 24425 VKKKKKKRQRY True NCI_RA007_Epitope_Rep1 1488.9728847657198 1488.97123490379 101.21 3 -0.4725268996558168 0.13368537147822598 0.9360248036542617 ['ENST00000358951.6_1_1:220323782-220323881:-|nuORF'] 78526 21363 NYPPQYLILKL True PC9_epitope_Rep3 1360.77547331544 1360.77436993586 87.47 2 -0.47270937993146733 0.1338001102885885 0.9361430094316943 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 75959 5569 NLTKSLLNI True NCI_RA007_Epitope_Rep5 1014.6073453611799 1014.60624993586 28.106 2 -0.4727765849070265 0.13383129469955216 0.9361864777221358 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-5|CCDC14'] 47151 6130 ITVSFEGNP True PC9_epitope_Rep2 962.4709114580199 962.46980993586 28.974 2 -0.47281710121634224 0.13383682267038713 0.9362126667973412 ['ENSG00000157423|ENST00000393567|HYDIN'] 49646 13375 KGIATLAVVL True PC9_epitope_Rep5 983.6379172134699 983.63682993586 56.463 2 -0.4728328736744921 0.13383682267038713 0.9362228584114948 ['ENSG00000181773|ENST00000374024|GPR3'] 68708 17592 LTKQCVLI True PC9_epitope_Rep1 916.5415743004799 916.54046993586 72.46 2 -0.4728355814872465 0.13383682267038713 0.9362246079119794 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 128851 14872 VQDLENYIL True H1975_Epitope_Rep2 1105.5655401188499 1105.56444993586 62.357 2 -0.4728538203137401 0.13383682267038713 0.9362363904204131 ['ENST00000554265.5_1_14:35568434-35579030:-|nuORF'] 19165 8687 ELHLVHWNP True H1975_Epitope_Rep3 1143.58252759567 1143.5814299358601 38.413 2 -0.4728616984058415 0.13383682267038713 0.9362414789685356 ['E2F5-CA3|3|fusion', 'E2F5-CA3|1|fusion', 'ENSG00000164879|ENST00000285381|CA3', 'E2F5-CA3|2|fusion'] 13920 11705 DQYEICMKYGR True PC9_epitope_Rep2 1404.6166067988797 1404.61550993586 50.355 2 -0.47296165822221053 0.13388471177944863 0.9363060024075377 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1'] 135012 12326 WDANDMVI True PC9_epitope_Rep4 962.41676771018 962.41566993586 55.222 2 -0.47297257020715344 0.13389918297104475 0.9363130413465244 ['MTUS1|p.A991Hfs*50|1|0.46|ENSG00000129422|chr8:17656001-17656001|T/-|frameshift_variant', 'MTUS1|p.I571Lfs*38|1|0.19|ENSG00000129422|chr8:17754097-17754097|T/-|frameshift_variant', 'nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'MTUS1-FGL1|3|fusion', 'MTUS1-FGL1|2|fusion', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 108025 19874 SWYIPICLMPS True NCI_RA007_Epitope_Rep5 1308.6246523014397 1308.62299490379 83.357 3 -0.4729998577060663 0.13391365367907504 0.9363306395279817 ['ENST00000564747.1_1_16:27472673-27473321:-|nuORF'] 66055 11887 LSEHEVPP True PC9_epitope_Rep1 906.44469671018 906.44358993586 50.589 2 -0.4730136453222975 0.1339214113873296 0.9363395292135008 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 107596 17119 SVPNKDVFQEL True PC9_epitope_Rep2 1274.65066672514 1274.6495699358602 71.097 2 -0.47302375631400456 0.1339214113873296 0.9363460474304129 ['ENSG00000115919|ENST00000264170|KYNU'] 100126 9220 SISSIPEK True PC9_epitope_Rep1 859.46509780159 859.46400993586 40.317 2 -0.47302696119247384 0.1339214113873296 0.9363481133432326 ['ENSG00000127083|ENST00000375550|OMD'] 4260 8116 AIEDSRDKPTY True NCI_RA007_Epitope_Rep2 1293.62009487285 1293.61898993586 36.201 2 -0.47303549029529773 0.1339214113873296 0.9363536109448076 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4'] 2969 19545 AFFSAGFLIV True PC9_epitope_Rep3 1070.5800679841798 1070.5789699358602 80.412 2 -0.4730565228405075 0.13393588051522795 0.9363671654878213 ['ENSG00000113946|ENST00000264734|CLDN16'] 63249 13885 LLSLRPRPRP True PC9_epitope_Rep3 1203.7564096367098 1203.75475490379 58.489 3 -0.47308421830392533 0.13394587370531238 0.9363850087809967 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 15685 11793 EAVAYNFQI True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 53.131 2 -0.4731335598740828 0.13394587370531238 0.9364167833114757 ['ENST00000453163.6_1_6:170891974-170892115:-|nuORF'] 66013 16126 LSEDQYFV True PC9_epitope_Rep2 999.4549270407099 999.45382993586 67.285 2 -0.4731430398574268 0.13394587370531238 0.9364228859960556 ['nc|ENSG00000141441|Q9H706-2|GAREM1', 'nc|ENSG00000141441|Q9H706-3|GAREM1', 'ENSG00000141441|ENST00000269209|GAREM1'] 3565 15332 AGLVPQALGVG True PC9_epitope_Rep6 980.5654805491998 980.56438993586 71.103 2 -0.4731533838246302 0.13395586589379083 0.9364295440758081 ['ENST00000367739.8_2_6:137540468-137540531:-|nuORF'] 102160 20659 SLRRRMRRRP True H1975_Epitope_Rep1 1382.8265719685398 1382.82493490379 85.883 3 -0.4731663919968001 0.13395586589379083 0.9364379158496089 ['ENSG00000177291|ENST00000321660|GJD4'] 112402 15133 TLCFDKESL True PC9_epitope_Rep1 1054.50049733414 1054.49940993586 63.029 2 -0.47319221600947203 0.13395586589379083 0.9364545317584135 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 28536 11923 FSELNHLSPV True H1975_Epitope_Rep1 1141.57677350889 1141.57566993586 50.863 2 -0.47323677626046645 0.1339825610530184 0.9364831910392284 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF'] 12703 13877 DLEACLTE True PC9_epitope_Rep3 892.38479887556 892.38370993586 58.459 2 -0.4732412674771711 0.1339825610530184 0.9364860787544308 ['nc|ENSG00000163950|Q14493-2|SLBP', 'ENSG00000163950|ENST00000489418|SLBP'] 125306 11199 VINTVTSGMAP True PC9_epitope_Rep2 1088.55359553616 1088.5524899358602 48.404 2 -0.473249002768519 0.1339825610530184 0.9364910519472582 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 130371 8291 VSKVTVGSI True PC9_epitope_Rep6 888.5280324113199 888.52692993586 41.506 2 -0.4732991793582284 0.13401373043579937 0.936523300447975 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 76339 9531 NPTLTKGATV True H1975_Epitope_Rep3 1000.55530978832 1000.55420993586 41.669 2 -0.47334013299892097 0.13402819536313224 0.9365496070381882 ['ENSG00000162928|ENST00000295030|PEX13'] 78039 9379 NVSVVDLTC[Carbamidomethyl]R True H1975_Epitope_Rep3 1161.58120754576 1161.58010993586 41.076 2 -0.47337317307619026 0.13402922755741128 0.9365708209753721 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 17162 6520 EGRKIHVI True NCI_RA007_Epitope_Rep3 950.5661492555399 950.56504993586 32.688 2 -0.4733790963755 0.13402922755741128 0.9365746232450858 ['ENSG00000141179|ENST00000268896|PCTP', 'ENST00000417982.6_1_17:53851072-53853458:+|nuORF', 'nc|ENSG00000141179|Q9UKL6-2|PCTP'] 26118 13849 FGSRTVFN True PC9_epitope_Rep5 926.46101548066 926.45990993586 58.29 2 -0.4733906313018255 0.13402922755741128 0.9365820269453641 ['ENST00000437198.6_1_16:14530386-14530566:-|nuORF'] 25458 13472 FEELC[Carbamidomethyl]SDLFR True H1975_Epitope_Rep3 1314.5914378762898 1314.59034993586 57.094 2 -0.4734508779375775 0.13402922755741128 0.9366206797366018 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 121052 10698 VEQQLGLE True H1975_Epitope_Rep1 914.4709114580198 914.4703649679301 46.109 1 -0.47346025394966784 0.13402922755741128 0.9366266926631766 ['ENST00000497232.5_1_2:74702580-74708169:-|nuORF', 'nc|ENSG00000135637|Q17RM4-3|CCDC142', 'nc|ENSG00000135637|Q17RM4-2|CCDC142', 'ENSG00000135637|ENST00000393965|CCDC142'] 44736 8781 ILWRQDIDLR True NCI_RA007_Epitope_Rep5 1326.7408191422198 1326.73918490379 40.443 3 -0.4734649045286374 0.13402922755741128 0.9366296748747275 ['NFE2L2|p.G31R|1|0.28|ENSG00000116044|chr2:177234226-177234226|C/T|missense_variant'] 85109 8581 QELETERRVK True H1975_Epitope_Rep1 1286.69426287262 1286.6931699358602 37.933 2 -0.47356513602288525 0.13402922755741128 0.9366939087619629 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1', 'ENST00000462441.1_1_2:63101526-63108832:+|nuORF'] 67613 15396 LSVLRSFRLL True PC9_epitope_Rep2 1202.74992727394 1202.7482849037901 64.502 3 -0.47359645531988737 0.1340369745653735 0.9367139641776513 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant', 'SCN10A|p.A856Pfs*16|1|0.41|ENSG00000185313|chr3:38728616-38728616|C/-|frameshift_variant'] 94531 18218 RRRRVPGRE True NCI_RA007_Epitope_Rep4 1180.7013543720798 1180.70024993586 78.826 2 -0.4735971582085623 0.1340369745653735 0.9367144141889359 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 121131 14744 VERRRRRGP True H1975_Epitope_Rep2 1180.7013543720798 1180.70024993586 61.873 2 -0.4736173874563772 0.1340369745653735 0.9367273639714382 ['ENST00000230859.7_2_5:6713753-6713927:+|nuORF'] 12662 9701 DLDLFPTP True H1975_Epitope_Rep3 916.45419876472 916.45310993586 42.337 2 -0.4736215162958555 0.1340369745653735 0.9367300066707974 ['ENST00000494089.1_1_2:129047366-129076044:-|nuORF', 'ENSG00000136720|ENST00000259241|HS6ST1'] 48741 5295 KDEYFKNMTPK True NCI_RA007_Epitope_Rep1 1399.6805869544298 1399.6794899358601 24.68 2 -0.473665313463454 0.1340491975751908 0.9367580314291789 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 103989 15044 SQCESEDLGI True PC9_epitope_Rep4 1079.44410465683 1079.4430099358601 65.799 2 -0.47369662135944934 0.1340491975751908 0.9367780556462056 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 42218 18018 IDSEFQAYV True PC9_epitope_Rep6 1070.49204082542 1070.49094993586 81.934 2 -0.4737561278850876 0.13406365852843927 0.9368160948529739 ['ENST00000567859.5_1_16:20812516-20814833:-|nuORF', 'nc|ENSG00000196678|A8K979-3|ERI2', 'nc|ENSG00000196678|A8K979-4|ERI2', 'ENSG00000196678|ENST00000357967|ERI2'] 73605 13623 MVWWCGSL True PC9_epitope_Rep3 980.4248302960799 980.42372993586 57.465 2 -0.47383729105900335 0.13409257898603968 0.9368679345152304 ['ENST00000446486.1_1_1:79128567-79129504:+|nuORF'] 91729 5998 RKEDNDEI True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 30.037 2 -0.47386337885365176 0.13409257898603968 0.9368845863914053 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 72141 17766 MFVFKDRWFWR True PC9_epitope_Rep1 1616.8074592333996 1616.8063699358602 73.134 2 -0.47389472586583786 0.13410703849044 0.9369045883924759 ['ENSG00000125966|ENST00000246186|MMP24'] 100976 16498 SLFQCYNV True PC9_epitope_Rep5 972.43750315476 972.43640993586 68.458 2 -0.47393612889331477 0.13411253965603606 0.9369309955269727 ['ENSG00000146247|ENST00000275034|PHIP'] 7820 3363 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 17.654 2 -0.47402329729876247 0.13411253965603606 0.9369865495902716 ['ENSG00000100403|ENST00000352645|ZC3H7B', 'ZC3H7B|p.S399Rfs*90|1|0.1|ENSG00000100403|chr22:41341139-41341139|C/-|frameshift_variant'] 12962 4549 DLLGTCDQAP True NCI_RA007_Epitope_Rep4 1031.4593607981499 1031.45826993586 23.901 2 -0.4740285311507796 0.13411253965603606 0.9369898833876872 ['ENSG00000180644|ENST00000441259|PRF1'] 59535 8438 LFSKYLVN True NCI_RA007_Epitope_Rep4 982.5487678559 982.54766993586 39.272 2 -0.47403828571649503 0.13411253965603606 0.936996096181585 ['ENST00000503562.1_1_4:24541566-24543501:-|nuORF'] 74118 8498 NEAIYDIC[Carbamidomethyl]R True H1975_Epitope_Rep1 1152.52335831647 1152.52226993586 37.617 2 -0.47403894111022693 0.13411253965603606 0.9369965135834369 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA3D|p.R215G|1|0.05|ENSG00000075886|chr2:131480336-131480336|C/G|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 127820 9690 VPENFNEAKP True H1975_Epitope_Rep3 1143.5560380643099 1143.5549499358601 42.294 2 -0.47405551647074495 0.13412699737857106 0.9370070688818154 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 10987 12884 DALMSSVP True PC9_epitope_Rep1 818.3844049527399 818.38330993586 54.431 2 -0.47411358516536817 0.13418930425926234 0.9370440309766058 ['ENSG00000102595|ENST00000376747|UGGT2', 'ENST00000463054.1_1_13:96529939-96547453:-|nuORF'] 14821 17056 DVSFMYLTFFL True PC9_epitope_Rep1 1381.66281163197 1381.66170993586 70.432 2 -0.47412539328284725 0.13418930425926234 0.9370515439953137 ['ENST00000557614.1_1_14:100803287-100808848:-|nuORF', 'nc|ENSG00000140105|P23381-2|WARS1', 'ENSG00000140105|ENST00000392882|WARS1'] 28039 8700 FQRGYYRYYNK True NCI_RA007_Epitope_Rep2 1556.75244645508 1556.7508049037901 38.489 3 -0.4742081925775303 0.13423491109441524 0.9371041961080647 ['nc|ENSG00000241468|P56134-2|ATP5MF', 'ENSG00000241468|ENST00000292475|ATP5MF', 'ENST00000491560.1_1_7:99055952-99057898:-|nuORF', 'ENST00000481899.1_1_7:99056719-99057898:-|nuORF'] 135486 16485 WILWRLWPRHV True NCI_RA007_Epitope_Rep2 1560.88300713216 1560.88135490379 68.852 3 -0.474224644912732 0.13423491109441524 0.9371146519745215 ['nc|ENSG00000173421|Q8IYA8-3|IHO1'] 15169 10715 EAAPHHQPP True H1975_Epitope_Rep2 982.4620781098199 982.46098993586 46.241 2 -0.47428285239112405 0.13424936556698278 0.937151627826935 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 42942 16064 IESIWSNLF True H1975_Epitope_Rep3 1107.56006081559 1107.5589699358602 67.246 2 -0.4743327620275626 0.13425933654985894 0.9371833121336233 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.F1569Sfs*24|1|0.14|ENSG00000197653|chr12:123838611-123838611|C/-|frameshift_variant', 'DNAH10|p.K1629Rfs*13|1|0.48|ENSG00000197653|chr12:123841424-123841424|A/-|frameshift_variant'] 133216 7284 VVSHQDSI True PC9_epitope_Rep2 883.43994568291 883.43884993586 33.404 2 -0.4743348756960915 0.13425933654985894 0.9371846535454667 ['ENSG00000120733|ENST00000314358|KDM3B', 'ENST00000512928.1_1_5:137708527-137717285:+|nuORF'] 126868 13494 VLQFSSNTV True PC9_epitope_Rep5 993.51311062317 993.51200993586 56.924 2 -0.47434246322329265 0.13425933654985894 0.9371894685913231 ['ENST00000596373.1_1_19:53683054-53693528:-|nuORF', 'ENST00000597544.5_1_19:53683054-53696636:-|nuORF'] 58147 14215 LEKQEKLSV True PC9_epitope_Rep3 1072.6128246644398 1072.61172993586 59.765 2 -0.47439076664580127 0.1342770340199646 0.9372201117501009 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'ENST00000572253.5_1_17:78061710-78071334:+|nuORF'] 99652 9414 SIGAHVTASFW True NCI_RA007_Epitope_Rep2 1174.5771078620598 1174.5760099358602 41.229 2 -0.4744300019625027 0.1342770340199646 0.9372449892306322 ['ENST00000451137.6_1_1:86048808-86048991:+|nuORF'] 136920 11669 YAGCVSQLFF True NCI_RA007_Epitope_Rep5 1133.52156713189 1133.52046993586 51.538 2 -0.474473652811428 0.1342770340199646 0.937272652758525 ['nc|ENSG00000186268|Q8NGN7|OR10D4P'] 99877 6751 SILRGDYQDAF True NCI_RA007_Epitope_Rep2 1283.61461556959 1283.61350993586 30.875 2 -0.47451429390046646 0.1342770340199646 0.9372983959392037 ['nc|ENSG00000179776|P33151-2|CDH5', 'ENSG00000179776|ENST00000341529|CDH5'] 55566 10626 LAGVRVRTV True PC9_epitope_Rep2 969.6083484206899 969.60724993586 46.186 2 -0.47452448877880904 0.1342770340199646 0.9373048517000705 ['ENSG00000179051|ENST00000375436|RCC2'] 63131 11972 LLRGRFAP True PC9_epitope_Rep5 928.5606699522798 928.5595699358599 51.046 2 -0.47453213926266385 0.1342770340199646 0.9373096957447103 ['ENSG00000005238|ENST00000322813|ATOSB', 'nc|ENSG00000005238|Q7L5A3-2|ATOSB', 'nc|ENSG00000005238|Q7L5A3-3|ATOSB'] 74634 11603 NGKRREPWNPC True H1975_Epitope_Rep1 1355.6516868679898 1355.6505899358601 49.62 2 -0.4745437919317761 0.1342770340199646 0.9373170729985051 ['DEFB116|p.S33R|1|0.11|ENSG00000215545|chr20:31303422-31303422|G/T|missense_variant'] 59853 11991 LGFQKRWRK True PC9_epitope_Rep4 1217.71454482473 1217.7128849037902 53.915 3 -0.4745751403290919 0.134287001952962 0.9373369144500234 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 128987 22832 VQLDLTGIFM True PC9_epitope_Rep4 1135.59473207215 1135.59362993586 96.047 2 -0.474590051853808 0.134287001952962 0.937346349854125 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'PRPF8|p.H1563R|1|0.59|ENSG00000174231|chr17:1660529-1660529|T/C|missense_variant'] 16455 21911 EELERETGA True PC9_epitope_Rep1 1032.4723680099999 1032.4712699358602 89.096 2 -0.4746156406456016 0.134287001952962 0.9373625374922119 ['ENST00000378572.7_1_10:13628976-13629072:+|nuORF'] 5604 9084 ANLKSLKP True PC9_epitope_Rep3 869.5334521449299 869.53234993586 39.881 2 -0.47465535252228436 0.1343014521782674 0.9373876497191774 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 3313 7799 AGGGGAFTVDP True H1975_Epitope_Rep2 947.4348603024699 947.43376993586 34.946 2 -0.4747174863902773 0.1343136600347176 0.9374269169070546 ['ENSG00000166341|ENST00000299441|DCHS1'] 36347 11250 GVERLTDLH True PC9_epitope_Rep6 1038.5458077337798 1038.54470993586 54.273 2 -0.47474562306397194 0.1343136600347176 0.9374446890860733 ['ENST00000414035.5_1_7:100875905-100880680:-|nuORF', 'ENST00000308344.9_1_7:100875905-100880710:-|nuORF'] 76023 13799 NLYRCQVYARS True H1975_Epitope_Rep3 1371.67175360623 1371.6706499358602 58.382 2 -0.4747946896017883 0.134319141479046 0.9374756671065732 ['ENSG00000159915|ENST00000683810|ZNF233'] 93084 5385 RPNDSRMLVA True PC9_epitope_Rep4 1157.59752603681 1157.59588490379 27.442 3 -0.4748269049864358 0.134319141479046 0.9374959963554845 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 9077 13006 AVIEAEKIAQV True PC9_epitope_Rep6 1169.66558851329 1169.66448993586 61.609 2 -0.47483685256184155 0.134319141479046 0.9375022721136007 ['ENSG00000107566|ENST00000421367|ERLIN1'] 74276 5530 NEIRRDHQP True H1975_Epitope_Rep2 1163.57956747355 1163.57846993586 26.279 2 -0.47485594008331594 0.134319141479046 0.9375143120279402 ['ENST00000392617.7_1_17:72667365-72740608:+|nuORF'] 37294 5241 GVRVRIGYIL True NCI_RA007_Epitope_Rep4 1144.7080624619598 1144.7064149037901 26.698 3 -0.4748655209445851 0.134319141479046 0.9375203543554136 ['ENST00000298717.8_1_14:21979369-21979501:-|nuORF'] 80803 11647 PHLQPHQLP True NCI_RA007_Epitope_Rep5 1065.57196291197 1065.5708699358602 51.453 2 -0.4748784673281645 0.1343313473188805 0.9375285181094417 ['EPN1|p.P456Hfs*33|1|0.35|ENSG00000063245|chr19:55694823-55694823|C/-|frameshift_variant'] 55630 10504 LAKAINQIAA True PC9_epitope_Rep4 1011.6076797143498 1011.60658993586 48.126 2 -0.4748906234957546 0.1343313473188805 0.937536182421724 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 58293 10314 LELWREDIR True H1975_Epitope_Rep1 1228.65642081192 1228.6553299358602 44.62 2 -0.47493674003777814 0.13436248331108144 0.9375652482383875 ['ENST00000568469.5_1_16:18995385-19051723:+|nuORF', 'ENSG00000170537|ENST00000304381|TMC7', 'nc|ENSG00000170537|Q7Z402-2|TMC7'] 87971 13105 QRMNRLDQCY True H1975_Epitope_Rep2 1325.59687441381 1325.59522490379 55.535 3 -0.4750800523225208 0.13437692962400494 0.937655471660642 ['nc|ENSG00000184613|Q99435-3|NELL2', 'NELL2|p.C296Afs*2|1|0.25|ENSG00000184613|chr12:44776027-44776027|A/-|frameshift_variant', 'NELL2|p.E360Mfs*8|1|0.09|ENSG00000184613|chr12:44714658-44714659|-/AT|frameshift_variant', 'ENST00000547751.5_1_12:45059243-45269664:-|nuORF', 'nc|ENSG00000184613|Q99435-4|NELL2', 'ENSG00000184613|ENST00000429094|NELL2', 'nc|ENSG00000184613|Q99435-2|NELL2'] 126392 6625 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 33.122 3 -0.4751357434409208 0.13442475217783117 0.9376904909262285 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 43984 13125 IIETKMLM True PC9_epitope_Rep5 977.52896101145 977.5278699358599 55.49 2 -0.4752482573573642 0.13445588505248401 0.9377611702327455 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF'] 130845 8100 VTAVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 40.683 2 -0.4752683497295658 0.13447032908350579 0.9377737819497495 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 13547 12755 DPANEKLLTVF True H1975_Epitope_Rep3 1245.6605031328502 1245.6599749679299 54.275 1 -0.4753098963766183 0.1345014601585315 0.9377998506601664 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF', 'ENST00000503745.1_1_4:99273670-99308609:+|nuORF', 'ENST00000511379.5_1_4:99182716-99300325:+|nuORF'] 63713 4749 LNARYMHK True NCI_RA007_Epitope_Rep2 1031.53346922827 1031.53236993586 23.103 2 -0.4754193003907543 0.13456596468978407 0.937868435225692 ['ENSG00000174502|ENST00000367135|SLC26A9', 'nc|ENSG00000174502|Q7LBE3-2|SLC26A9'] 30475 20334 GAGAGFGVL True H1975_Epitope_Rep1 747.3915389385099 747.39099496793 84.577 1 -0.47555745212367473 0.1346137800991206 0.9379549139234928 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 135952 19958 WQDEFSHIM True PC9_epitope_Rep3 1191.5018943164698 1191.5007899358602 82.013 2 -0.4756071889853438 0.13464490722199973 0.9379860128307027 ['ENSG00000151876|ENST00000281623|FBXO4', 'ENST00000505566.1_1_5:41939508-41941380:+|nuORF'] 45822 17785 ISDGANIINL True PC9_epitope_Rep5 1028.55022440788 1028.54912993586 73.427 2 -0.47564667079744716 0.13465035956818447 0.9380106864603839 ['nc|ENSG00000244694|Q6ZW05|PTCHD4', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 49965 8749 KIMNMIKLY True PC9_epitope_Rep2 1152.6399084427599 1152.63826490379 39.011 3 -0.4756511366592808 0.13465035956818447 0.9380134766104591 ['ENSG00000143368|ENST00000271628|SF3B4'] 125949 11744 VLDENDNSPK True H1975_Epitope_Rep2 1129.52513185885 1129.5240299358602 50.248 2 -0.4756730948309808 0.13465035956818447 0.9380271933252124 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'PCDH9|p.L1216Wfs*4|1|0.35|ENSG00000184226|chr13:66304723-66304723|G/-|frameshift_variant', 'ENSG00000184226|ENST00000377865|PCDH9'] 93083 7472 RPNDSRMLVA True PC9_epitope_Rep3 1157.59752603681 1157.59588490379 33.745 3 -0.47568813236019775 0.13465035956818447 0.938036584819891 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 122372 7835 VGDKLNVI True NCI_RA007_Epitope_Rep4 856.50181766348 856.50072993586 36.836 2 -0.47568948706421454 0.13465035956818447 0.9380374308001883 ['ENSG00000121691|ENST00000241052|CAT'] 78 6834 AAAKDLTGV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 31.258 2 -0.475779477369915 0.1346647979444055 0.9380935970327722 ['ENSG00000140743|ENST00000268383|CDR2'] 39288 14747 HINRWRIA True PC9_epitope_Rep5 1064.59918071932 1064.5980899358601 61.723 2 -0.47578627709522153 0.13467474181223618 0.9380978385432687 ['ENST00000394111.6_1_2:73143891-73161080:+|nuORF'] 6995 18837 AQLPALWKA True PC9_epitope_Rep3 996.5756513100799 996.57454993586 77.679 2 -0.47580225463213327 0.13467474181223618 0.9381078036071984 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2', 'ENST00000588777.1_1_19:12986806-12989487:-|nuORF'] 80981 18139 PIHIYVII True PC9_epitope_Rep4 966.59023874506 966.58914993586 77.836 2 -0.47582004519333787 0.13467474181223618 0.9381188972086495 ['nc|ENSG00000112038|P35372-8|OPRM1', 'OPRM1|p.A306G|1|0.86|ENSG00000112038|chr6:154091225-154091225|C/G|missense_variant', 'nc|ENSG00000112038|P35372-15|OPRM1', 'nc|ENSG00000112038|P35372-12|OPRM1', 'nc|ENSG00000112038|P35372-14|OPRM1', 'nc|ENSG00000112038|P35372-13|OPRM1', 'nc|ENSG00000112038|P35372-11|OPRM1', 'nc|ENSG00000112038|P35372-2|OPRM1', 'ENSG00000112038|ENST00000330432|OPRM1', 'nc|ENSG00000112038|P35372-6|OPRM1', 'nc|ENSG00000112038|P35372-4|OPRM1', 'nc|ENSG00000112038|P35372-7|OPRM1', 'nc|ENSG00000112038|P35372-5|OPRM1', 'nc|ENSG00000112038|P35372-9|OPRM1', 'nc|ENSG00000112038|P35372-10|OPRM1', 'nc|ENSG00000112038|P35372-3|OPRM1'] 65551 27344 LRRRKRRRIA True PC9_epitope_Rep5 1379.91743557827 1379.91580490379 112.09 3 -0.4759087573267439 0.13475591444492643 0.9381741800634091 ['ENST00000496567.5_1_9:97782205-97782394:+|nuORF'] 107049 7036 SVFYFLPLIDP True H1975_Epitope_Rep3 1309.6958260124097 1309.69472993586 32.029 2 -0.4760415628061883 0.1348370843691086 0.9382568315090292 ['ENST00000512747.3_1_X:70327795-70327867:-|nuORF'] 19120 6608 ELGNTQNFML True H1975_Epitope_Rep3 1165.54375912845 1165.5426699358602 30.37 2 -0.47607320321878105 0.1348447691974042 0.9382765036297935 ['ENSG00000167721|ENST00000301364|TSR1'] 64822 5389 LQDAYMRIF True NCI_RA007_Epitope_Rep2 1155.57466533391 1155.5735699358602 25.582 2 -0.476083176952734 0.1348447691974042 0.938282703165667 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.G1117V|1|0.15|ENSG00000176927|chr17:30080905-30080905|G/T|missense_variant'] 13060 4004 DLPFHRPRP True H1975_Epitope_Rep3 1133.60941104985 1133.60830993586 20.527 2 -0.4760918986967355 0.1348447691974042 0.9382881238781614 ['nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 34130 12169 GMYLGEIVRQ True PC9_epitope_Rep6 1164.59612905448 1164.59502993586 58.165 2 -0.47609911800368265 0.1348447691974042 0.9382926103744313 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000470920.1_1_10:71018680-71021051:+|nuORF'] 46072 9607 ISGTGSNLQAL True PC9_epitope_Rep5 1059.55603806431 1059.5549499358601 41.916 2 -0.47626738566380356 0.13490699808157477 0.9383970724383237 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 56731 10214 LDLGAAKA True PC9_epitope_Rep2 757.43340375049 757.43230993586 44.624 2 -0.47626939784101774 0.13490699808157477 0.9383983203494074 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF'] 13836 7253 DQLLQELRDPT True NCI_RA007_Epitope_Rep1 1326.67794410214 1326.6768499358602 32.203 2 -0.4763900120069397 0.13498365249883232 0.9384730681776576 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000593196.1_1_19:39083130-39086358:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 56323 6214 LDCAHTAASF True PC9_epitope_Rep4 1034.44913046762 1034.4480299358602 30.946 2 -0.4763913015943505 0.13498365249883232 0.9384738667893927 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 127522 7588 VNPGDVLT True PC9_epitope_Rep2 813.42323298961 813.42212993586 34.555 2 -0.47641250689620396 0.13498365249883232 0.938486996984424 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF'] 33702 16391 GLHGEFGL True PC9_epitope_Rep1 828.4130026590799 828.41190993586 67.87 2 -0.4764711185842642 0.13501251042535445 0.9385232717403851 ['ENSG00000164692|ENST00000297268|COL1A2', 'ENST00000488298.5_1_7:94043536-94045869:+|nuORF', 'ENST00000473573.5_1_7:94043536-94051279:+|nuORF'] 38438 4928 HENNNGQAAF True NCI_RA007_Epitope_Rep1 1100.4635346618 1100.4624299358602 23.25 2 -0.47649699741853974 0.13501251042535445 0.9385392800851395 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 46990 5454 ITQIEHEVSSS True NCI_RA007_Epitope_Rep3 1228.5935457718401 1228.59244993586 28.465 2 -0.4765211853689132 0.1350436189554803 0.9385542380078771 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 64329 19772 LPLARGRRDP True H1975_Epitope_Rep2 1149.6730739355698 1149.67196993586 82.027 2 -0.47660664324824564 0.13505804643714972 0.9386070509957793 ['ENST00000298292.12_1_14:50100549-50100927:-|nuORF'] 137430 3784 YEDEINRRTA True H1975_Epitope_Rep2 1265.60002813461 1265.59837490379 19.568 3 -0.47664567543977004 0.13507247343752607 0.9386311550196158 ['CON__P08729'] 102622 12472 SLWPPFRCRWK True NCI_RA007_Epitope_Rep1 1474.76559442142 1474.7644899358602 52.491 2 -0.47666086659509493 0.13508689995663342 0.9386405331693499 ['ENSG00000214711|ENST00000403897|CAPN14'] 12317 9684 DIPPPLIEEA True H1975_Epitope_Rep1 1092.5702911461199 1092.56918993586 42.174 2 -0.4767325352412077 0.1351157515511375 0.938684754408405 ['ENSG00000148400|ENST00000651671|NOTCH1', 'NOTCH1|p.D1815Gfs*19|1|0.53|ENSG00000148400|chr9:136502029-136502030|-/C|frameshift_variant'] 13319 14376 DLTVFVYQQL True PC9_epitope_Rep5 1224.63903941228 1224.63739490379 60.297 3 -0.47674915047028893 0.1351157515511375 0.9386950010060212 ['nc|ENSG00000145734|A6H8Y1-8|BDP1'] 11353 3857 DEPEKERLRQR True NCI_RA007_Epitope_Rep2 1454.7589883875 1454.75734490379 19.638 3 -0.4767875964895718 0.13514009339559707 0.9387187028598938 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 70223 19814 LVQNHQDP True PC9_epitope_Rep1 949.4617437566499 949.46064993586 81.03 2 -0.476793186348857 0.13514009339559707 0.9387221480874427 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 36020 6960 GTYGQVYKAK True NCI_RA007_Epitope_Rep5 1113.5818588893296 1113.5807699358602 33.456 2 -0.47683159174901624 0.13514009339559707 0.9387458124898901 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 61432 19514 LIVTGPLVLI True PC9_epitope_Rep6 1036.68961843316 1036.68852993586 87.724 2 -0.4768574032043477 0.13514009339559707 0.9387617107517192 ['ENST00000466502.1_1_3:142300490-142300658:+|nuORF'] 61826 19524 LLATWHSAL True PC9_epitope_Rep2 1010.5549158655 1010.55380993586 80.483 2 -0.47689994283823567 0.13522122713096846 0.9387879018746701 ['ENST00000483495.5_1_20:34214165-34218616:-|nuORF'] 661 5929 AATGTPSTVL True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 29.426 2 -0.4769188158472298 0.13523564924452153 0.9387995175021856 ['ENSG00000140948|ENST00000671377|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14'] 21460 13060 ERKYYYYERHR True H1975_Epitope_Rep3 1661.80627293309 1661.80516993586 55.475 2 -0.4769725466942938 0.13528116870122073 0.9388325725235852 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 102302 19039 SLSPFRRHSW True PC9_epitope_Rep2 1271.65233849099 1271.65124993586 78.599 2 -0.476978853637332 0.13528116870122073 0.9388364511448776 ['ENSG00000170776|ENST00000394518|AKAP13', 'AKAP13|p.S1795Qfs*12|1|0.29|ENSG00000170776|chr15:85693365-85693366|-/T|frameshift_variant', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13'] 108586 19017 SYPAFWTSF True NCI_RA007_Epitope_Rep4 1104.4916469026 1104.49107496793 82.262 1 -0.4770405685918389 0.13531226548820144 0.9388743890166189 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 126527 4815 VLLLKLRKRH True NCI_RA007_Epitope_Rep1 1274.86629443886 1274.8651899358601 22.81 2 -0.4771255916114789 0.1353397248853689 0.9389266093422716 ['ENSG00000090776|ENST00000204961|EFNB1'] 15219 4178 EAEAAYREKN True H1975_Epitope_Rep3 1179.5520153130299 1179.55090993586 21.189 2 -0.4771565907485437 0.1353397248853689 0.9389456355649471 ['ENSG00000091010|ENST00000646991|POU4F3'] 82081 17910 PMKRRRRAKLC True NCI_RA007_Epitope_Rep4 1413.8285461144897 1413.8274499358602 77.513 2 -0.4772216477833599 0.1353397248853689 0.938985542541148 ['ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-6|NSD2', 'ENST00000508355.5_1_4:1902372-1920392:+|nuORF', 'nc|ENSG00000109685|O96028-5|NSD2', 'nc|ENSG00000109685|O96028-3|NSD2', 'WHSC1-GSDMB|4|fusion', 'WHSC1-GSDMB|3|fusion', 'WHSC1-GSDMB|1|fusion', 'WHSC1-GSDMB|2|fusion'] 41146 21046 HVDEFLTFV True PC9_epitope_Rep2 1105.54441075145 1105.5433099358602 86.408 2 -0.4772294706621277 0.1353397248853689 0.9389903391318885 ['ENSG00000142623|ENST00000375471|PADI1'] 141486 10282 YTIVFIYYAF True NCI_RA007_Epitope_Rep1 1298.6587122276999 1298.6576099358601 44.002 2 -0.47723079084051434 0.1353397248853689 0.9389911485539503 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 83787 18227 PVKQPPPLAP True PC9_epitope_Rep6 1042.61751612206 1042.61640993586 82.752 2 -0.47724043487577095 0.1353397248853689 0.9389970610770892 ['nc|ENSG00000137693|P46937-4|YAP1', 'nc|ENSG00000137693|P46937-5|YAP1', 'nc|ENSG00000137693|P46937-3|YAP1', 'nc|ENSG00000137693|P46937-6|YAP1', 'nc|ENSG00000137693|P46937-7|YAP1', 'nc|ENSG00000137693|P46937-2|YAP1', 'nc|ENSG00000137693|P46937-8|YAP1', 'ENSG00000137693|ENST00000282441|YAP1', 'nc|ENSG00000137693|P46937-9|YAP1'] 83262 8685 PTAEGLAAA True PC9_epitope_Rep4 799.4075829254699 799.40703496793 40.898 1 -0.47724234004591404 0.1353397248853689 0.9389982290101775 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 56695 8640 LDKRGSHKEYK True NCI_RA007_Epitope_Rep2 1359.72589735407 1359.72480993586 38.254 2 -0.47724690829764627 0.1353397248853689 0.9390010293934956 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'ENST00000531732.5_1_11:12183702-12229694:+|nuORF', 'nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 60703 15228 LHPVSAIISL True PC9_epitope_Rep2 1048.62808080576 1048.6269899358601 63.839 2 -0.477250514068309 0.1353397248853689 0.9390032396588481 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 7047 5732 AQQMQFMFPG True PC9_epitope_Rep2 1183.5154362056298 1183.5143299358601 27.439 2 -0.47725319483306927 0.1353397248853689 0.9390048828525547 ['ENSG00000139793|ENST00000679496|MBNL2', 'nc|ENSG00000139793|Q5VZF2-3|MBNL2', 'nc|ENSG00000139793|Q5VZF2|MBNL2', 'nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 13672 7885 DPRGPGVYIL True NCI_RA007_Epitope_Rep3 1085.58694426977 1085.58584993586 38.131 2 -0.47725910892371787 0.13534962819700558 0.9390085077506864 ['nc|ENSG00000145649|P12544-2|GZMA', 'ENSG00000145649|ENST00000274306|GZMA'] 139458 11251 YLQLQEAF True NCI_RA007_Epitope_Rep4 1010.5072969667398 1010.50618993586 50.168 2 -0.4772719158922339 0.13534962819700558 0.939016356595751 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-3|TCAF2'] 125848 17503 VLAGELVGA True PC9_epitope_Rep5 827.4752685624699 827.47416993586 72.328 2 -0.4772750067166355 0.13534962819700558 0.9390182506509529 ['ENSG00000198960|ENST00000361910|ARMCX6'] 130697 16455 VSTVNERFDV True PC9_epitope_Rep5 1164.57750178488 1164.57640993586 68.292 2 -0.4772966082686101 0.1353640440820954 0.9390314861218623 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'MTMR11|p.G424Efs*52|1|0.33|ENSG00000014914|chr1:149931279-149931279|C/-|frameshift_variant', 'ENST00000479272.1_1_1:149906082-149907243:-|nuORF', 'nc|ENSG00000014914|A4FU01-3|MTMR11', 'ENST00000466496.5_1_1:149902724-149908701:-|nuORF', 'nc|ENSG00000014914|A4FU01-2|MTMR11', 'ENST00000492824.5_1_1:149905714-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-5|MTMR11', 'ENST00000482343.5_1_1:149902724-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-6|MTMR11'] 57607 10809 LEECPWRLPGP True PC9_epitope_Rep2 1295.6332428391897 1295.63158490379 46.893 3 -0.4773156021097556 0.1353784594864955 0.9390431210112834 ['ENSG00000170279|ENST00000307003|C7orf33'] 66873 12298 LSNIFVIGK True NCI_RA007_Epitope_Rep4 989.5909670210499 989.58986993586 54.301 2 -0.47737879846430703 0.13540728885332268 0.9390818137030301 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 17329 15317 EHAPSIIFM-[Oxidation] True PC9_epitope_Rep2 1059.5059174481898 1059.50480993586 64.198 2 -0.4773794787575886 0.13540728885332268 0.9390822300619746 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 72444 20013 MKRNRWLQMWR True H1975_Epitope_Rep1 1603.8340254177497 1603.8329299358602 83.287 2 -0.4774408004331465 0.13541944518538276 0.9391197468284822 ['ENST00000496445.5_1_10:114207222-114224375:+|nuORF'] 5560 19997 AMTQLLAGV True PC9_epitope_Rep4 902.4895387276199 902.48844993586 85.051 2 -0.47750921199215207 0.13541944518538276 0.9391615688852997 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 100794 11408 SLEGLGAL True H1975_Epitope_Rep3 758.41741933318 758.4168749679301 48.997 1 -0.4775238491690319 0.1354316007068316 0.9391705126105583 ['ENST00000278823.6_1_11:62361094-62361322:-|nuORF'] 117700 5371 TVTVPTESTAT True H1975_Epitope_Rep3 1105.55028397753 1105.54918993586 25.726 2 -0.4776007738838684 0.1354316007068316 0.9392174901502549 ['MUC5B|p.G4464E|1|0.21|ENSG00000117983|chr11:1250271-1250271|G/A|missense_variant'] 22608 9183 ETLQHRRYPNV True NCI_RA007_Epitope_Rep1 1411.7320453636698 1411.73094993586 39.721 2 -0.4776250655063737 0.13545816733067728 0.939232315984873 ['ENSG00000137767|ENST00000260324|SQOR'] 59615 18915 LFYDRILCDV True PC9_epitope_Rep3 1255.62709482959 1255.6254449037901 77.977 3 -0.4776376487525183 0.13545816733067728 0.9392399941945311 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2', 'NSUN2|p.Q454Pfs*16|1|0.23|ENSG00000037474|chr5:6607346-6607347|CT/-|frameshift_variant'] 141444 21866 YTFTRRFI True PC9_epitope_Rep5 1102.59236400338 1102.59126993586 89.144 2 -0.4776534356442626 0.13545816733067728 0.9392496256195031 ['ENST00000335670.10_1_15:60784332-60784527:-|nuORF'] 136125 4551 WRPSRRWRRTW True NCI_RA007_Epitope_Rep4 1641.8865293728097 1641.88433987172 23.908 4 -0.47770764626696116 0.13550591765294215 0.9392826851985548 ['ENST00000376874.8_1_12:124017965-124018079:-|nuORF'] 80247 16874 PGASKMLTSMV True PC9_epitope_Rep3 1120.56205204488 1120.5609499358602 70.063 2 -0.4777496222302067 0.1355180690758768 0.9393082689883089 ['MUC16|p.L11463M|1|0.28|ENSG00000181143|chr19:8936568-8936568|G/T|missense_variant'] 104337 13002 SQIREMETL True PC9_epitope_Rep6 1105.54375912845 1105.5426699358602 61.592 2 -0.4777541529612899 0.1355180690758768 0.9393110296439379 ['ENSG00000157456|ENST00000288207|CCNB2'] 135125 19143 WEEPHDSTLY True H1975_Epitope_Rep2 1275.5407819229902 1275.53968993586 79.456 2 -0.4778156232910177 0.13556581601186804 0.9393484699029437 ['ENSG00000107829|ENST00000331272|FBXW4', 'nc|ENSG00000107829|P57775|FBXW4', 'ENST00000470093.5_1_10:103371050-103384578:-|nuORF'] 67112 7646 LSQLDDQYS True H1975_Epitope_Rep2 1067.47711903727 1067.4760299358602 34.363 2 -0.4778219263810868 0.13558022468913558 0.9393523074310317 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 56422 16628 LDEFLLPAE True H1975_Epitope_Rep2 1045.5331773614098 1045.53208993586 69.19 2 -0.4779877666039003 0.13564463705308777 0.939453172992523 ['ENSG00000148384|ENST00000371712|INPP5E', 'nc|ENSG00000148384|Q9NRR6-2|INPP5E'] 139415 21579 YLPEELSAL True PC9_epitope_Rep1 1033.5331773614098 1033.53267496793 87.826 1 -0.4780284122437469 0.13566892781546358 0.9394778636737052 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1'] 101592 8595 SLLPASNHPSP True H1975_Epitope_Rep2 1118.57202248162 1118.57092993586 38.015 2 -0.4780474314507961 0.13566892781546358 0.9394894130160076 ['ENST00000377474.3_1_13:77458945-77459041:-|nuORF'] 59208 15617 LFEDYNEI True H1975_Epitope_Rep2 1041.46549172441 1041.46438993586 65.227 2 -0.47806204622540877 0.13566892781546358 0.9394982860064309 ['nc|ENSG00000080644|P32297-3|CHRNA3', 'nc|ENSG00000080644|P32297-1|CHRNA3', 'ENSG00000080644|ENST00000326828|CHRNA3'] 693 9891 AAVASTTSPK True H1975_Epitope_Rep1 931.4974605590301 931.49636993586 42.979 2 -0.47806266379539086 0.13566892781546358 0.9394986609144136 ['RGL1|p.D503V|1|0.41|ENSG00000143344|chr1:183907047-183907047|A/T|missense_variant'] 14750 4251 DVNCLDDSFPP True H1975_Epitope_Rep2 1220.50195388612 1220.50084993586 21.461 2 -0.4780838526590831 0.13569547681743943 0.9395115223604771 ['ENST00000452157.5_1_5:56218957-56234137:-|nuORF', 'nc|ENSG00000155545|Q7Z3K6-4|MIER3', 'nc|ENSG00000155545|Q7Z3K6-3|MIER3', 'ENSG00000155545|ENST00000381199|MIER3', 'nc|ENSG00000155545|Q7Z3K6-2|MIER3'] 122859 10202 VGGYSRAP True PC9_epitope_Rep1 805.4082516318099 805.40714993586 44.121 2 -0.47811026096242343 0.13569547681743943 0.9395275474173965 ['ENST00000489739.1_1_9:139685858-139686514:+|nuORF'] 88829 11533 QVAERVEAL True PC9_epitope_Rep1 1013.5505587610497 1013.54946993586 49.241 2 -0.4781242707709511 0.13569547681743943 0.9395360467884043 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000560075.1_1_15:52439654-52476873:-|nuORF'] 92098 11433 RKYKVWMRHRY True NCI_RA007_Epitope_Rep2 1621.8776044818899 1621.8759449037902 49.063 3 -0.4781529701925749 0.13572202316473628 0.9395534535234672 ['ENSG00000184967|ENST00000330579|NOC4L', 'NOC4L|p.W207*|1|0.17|ENSG00000184967|chr12:132147896-132147896|G/-|frameshift_variant'] 80570 10984 PGPSASSLL True PC9_epitope_Rep2 827.43888305375 827.43778993586 47.572 2 -0.47816537441934265 0.13572202316473628 0.9395609750779861 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 100753 6937 SLEAQLMQIR True H1975_Epitope_Rep3 1187.63324283919 1187.63214993586 31.644 2 -0.47817039629182573 0.13572202316473628 0.9395640198763732 ['CON__Q9D312', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__P35900'] 41797 19560 IASKEQDF True PC9_epitope_Rep5 936.4552613938798 936.45416993586 80.287 2 -0.47818271676166463 0.13572964055391692 0.9395714890971558 ['ENST00000463912.5_1_7:139083347-139097327:+|nuORF', 'nc|ENSG00000269955|Q9Y383-3|LUC7L2', 'nc|ENSG00000269955|Q9Y383-2|LUC7L2', 'ENSG00000146963|ENST00000354926|LUC7L2', 'nc|ENSG00000164898|Q96HJ9-2|FMC1'] 34290 4311 GPADRAAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 23.001 2 -0.4781841960072614 0.13572964055391692 0.9395723858084442 ['ENST00000562222.5_1_16:30087691-30087790:+|nuORF'] 13302 8001 DLTPGSVEEA True NCI_RA007_Epitope_Rep1 1016.4662200004 1016.46512993586 35.116 2 -0.4781862895751753 0.13572964055391692 0.9395736548918606 ['nc|ENSG00000155256|Q5T4F4-4|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-8|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-2|ZFYVE27', 'ENSG00000155256|ENST00000684270|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-3|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-6|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-7|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-5|ZFYVE27'] 2168 9917 AELRVTLTA True H1975_Epitope_Rep2 972.56039516876 972.55928993586 43.135 2 -0.4781978004095763 0.13572964055391692 0.9395806319887184 ['chr1:221918712-221976287|258|18.01|0.18|6.65|-|2|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|22'] 64142 11667 LPETRNKPLF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 49.754 3 -0.47822061133771576 0.1357607065489085 0.9395944556211056 ['ENSG00000149742|ENST00000279178|SLC22A9'] 139790 7389 YPHKRTNFI True NCI_RA007_Epitope_Rep5 1174.6247267608198 1174.62307490379 35.1 3 -0.4783037911577328 0.1357895087649137 0.9396448315671155 ['ENSG00000203963|ENST00000684719|C1orf141'] 97756 5131 SEIRCDLER True NCI_RA007_Epitope_Rep2 1119.5342570739099 1119.5331499358601 24.581 2 -0.478303934107717 0.1357895087649137 0.939644918098557 ['nc|ENSG00000126337|O76013-2|KRT36', 'ENSG00000126337|ENST00000328119|KRT36', 'CON__O76013'] 95029 1381 RTRRRKLW True H1975_Epitope_Rep3 1170.7210271874999 1170.71938490379 7.4601 3 -0.47838256924260486 0.13580390915301685 0.93969249573222 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 59763 23555 LGEEAVLLL True PC9_epitope_Rep2 955.5589981864299 955.55790993586 96.079 2 -0.47845723765345494 0.13583497183990403 0.9397376321233505 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 13242 9674 DLSSKVWN True NCI_RA007_Epitope_Rep1 947.47124581119 947.47014993586 41.628 2 -0.47848593858982735 0.13586376966142363 0.9397549709133055 ['nc|ENSG00000109111|Q7KZ85-2|SUPT6H'] 133979 8914 VYIRGSKIRF True PC9_epitope_Rep4 1237.7295261825295 1237.72789490379 41.825 3 -0.47848725363219585 0.13586376966142363 0.9397557652138828 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 20850 5637 EQKREQYRQVR True NCI_RA007_Epitope_Rep1 1518.80152190582 1518.7998749037902 25.987 3 -0.4785324276140635 0.13589482979822384 0.9397830432656549 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3', 'ENST00000570131.1_1_16:1812897-1813838:+|nuORF'] 91808 23303 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 96.102 2 -0.4786065458961484 0.13589564174330268 0.9398277674055618 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 127972 11352 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48561496793 48.669 1 -0.47861058719974786 0.13589564174330268 0.9398302048577397 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 33284 7350 GKKSGFVN True NCI_RA007_Epitope_Rep4 835.45520182423 835.45410993586 34.912 2 -0.47862299696247124 0.13589564174330268 0.9398376888888694 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 107060 21319 SVGIVIVSLL True PC9_epitope_Rep2 998.6375828603 998.63648993586 87.468 2 -0.4786426624736927 0.13589564174330268 0.9398495464247805 ['ENST00000396953.6_2_3:12882746-12883025:-|nuORF'] 48471 7337 KAEKSHDELP True NCI_RA007_Epitope_Rep3 1152.57750178488 1152.57640993586 35.983 2 -0.47865920986297894 0.13589564174330268 0.9398595217048608 ['ENSG00000084674|ENST00000233242|APOB'] 122431 8478 VGDVFRGG True PC9_epitope_Rep6 805.4082516318099 805.40714993586 42.322 2 -0.4786820537261666 0.13589564174330268 0.9398732894671511 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 115273 4457 TREGSSPAL True PC9_epitope_Rep1 916.4614094034798 916.46030993586 22.028 2 -0.4786884417241701 0.13589564174330268 0.939877138778411 ['ENSG00000146828|ENST00000354161|SLC12A9'] 106726 6114 STVRIPAGP True H1975_Epitope_Rep2 896.5079656730798 896.50686993586 28.496 2 -0.4787196787012926 0.13592669720949604 0.9398959574958231 ['ENST00000413366.7_1_17:64803214-64803382:+|nuORF'] 68926 10423 LTPCCQYYINE True H1975_Epitope_Rep1 1345.5682596241297 1345.5671699358602 45.045 2 -0.47874616745555937 0.13594109219338288 0.9399119101653448 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|43|2|sense'] 11038 5160 DASQHPDP True H1975_Epitope_Rep2 865.3566099817699 865.35550993586 24.925 2 -0.47881700524888526 0.13600546420777318 0.9399545470384026 ['ENST00000523402.5_1_8:22411983-22419017:+|nuORF', 'ENST00000517535.5_1_8:22411983-22423386:+|nuORF', 'ENSG00000120896|ENST00000240123|SORBS3'] 57830 18130 LEETKYLF True PC9_epitope_Rep6 1041.53826274185 1041.5371699358602 82.372 2 -0.47899756907122143 0.1360531751849137 0.940063064973504 ['ENSG00000181378|ENST00000341552|CFAP65'] 66616 15270 LSKARRRSRPR True PC9_epitope_Rep4 1381.8490812349298 1381.8474449037901 66.666 3 -0.47908432317462024 0.13606756734245115 0.9401151208937997 ['ENST00000395094.3_1_16:30543822-30545758:-|nuORF', 'ENST00000252799.3_1_16:30543822-30545758:-|nuORF', 'nc|ENSG00000169955|Q9BV97|ZNF747', 'ENSG00000169955|ENST00000693075|ZNF747'] 82915 16113 PSAQRWWWRWQ True NCI_RA007_Epitope_Rep4 1585.7690995787298 1585.7680099358602 69.878 2 -0.4791874289470291 0.1361152756954856 0.9401769186472897 ['ENST00000305123.5_1_2:227663257-227663680:-|nuORF'] 20984 3003 EQQRRWVQLEK True NCI_RA007_Epitope_Rep2 1498.8004592766595 1498.79825987172 16.244 4 -0.47923978724932786 0.1361273987206823 0.9402082712599676 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 60491 5823 LHAAAYWGQVP True PC9_epitope_Rep2 1211.6087423435101 1211.60710490379 27.791 3 -0.4792489429433206 0.1361273987206823 0.9402137517651141 ['ENSG00000160972|ENST00000435887|PPP1R16A'] 5120 15638 ALLLLC[Carbamidomethyl]GEDD True H1975_Epitope_Rep1 1117.53252601784 1117.53197496793 65.438 1 -0.47931249299399764 0.13613952093813506 0.9402517757379113 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF'] 85190 16169 QEPGTEDEICS True PC9_epitope_Rep5 1206.47104768066 1206.46994993586 67.183 2 -0.47931629085823374 0.13613952093813506 0.9402540472084888 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 29469 7037 FVERGLTQ True NCI_RA007_Epitope_Rep3 948.5028802926399 948.50178993586 34.798 2 -0.4793513596217644 0.13614937455235937 0.9402750166944762 ['ENST00000481644.1_1_1:22149811-22150439:-|nuORF'] 16840 13552 EEYWRAYYRA True H1975_Epitope_Rep1 1405.64149902377 1405.6404099358601 57.251 2 -0.4793532304828173 0.13614937455235937 0.9402761351365297 ['ENSG00000064703|ENST00000369702|DDX20'] 20156 15792 ENEEEKKML True NCI_RA007_Epitope_Rep5 1148.5383393948398 1148.53724993586 67.464 2 -0.4793608750188677 0.13614937455235937 0.9402807049504924 ['ENSG00000170776|ENST00000394518|AKAP13', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13'] 3858 6440 AGWEDWILQWK True NCI_RA007_Epitope_Rep2 1430.6982856239 1430.69665490379 29.657 3 -0.47940197206854407 0.13616149502823166 0.9403052651674065 ['ENST00000529308.5_2_11:77900012-77900084:+|nuORF'] 30925 9603 GAQWSPQDP True H1975_Epitope_Rep2 984.4301092751998 984.42900993586 41.913 2 -0.4794035124133127 0.13616149502823166 0.9403061854673821 ['ENSG00000154734|ENST00000284984|ADAMTS1', 'ADAMTS1|p.S639Vfs*40|1|0.21|ENSG00000154734|chr21:26839701-26839701|C/-|frameshift_variant', 'ADAMTS1|p.E225Q|1|0.19|ENSG00000154734|chr21:26844282-26844282|C/G|missense_variant'] 43541 8101 IGQGM[Oxidation]LSIGY True H1975_Epitope_Rep3 1053.51648213189 1053.5153899358602 36.135 2 -0.4795708819337399 0.13619026998217884 0.9404060823413916 ['ENSG00000203697|ENST00000366872|CAPN8'] 18602 6746 EKRRKEERCKK True H1975_Epitope_Rep1 1488.8307138591197 1488.82906490379 30.989 3 -0.47958194703389845 0.13619026998217884 0.940412679702392 ['ENST00000413731.1_1_17:16649540-16650074:-|nuORF'] 101790 6758 SLPASLGR True NCI_RA007_Epitope_Rep5 799.45520182423 799.45410993586 32.671 2 -0.47958429723367596 0.13620238828839332 0.9404140808537675 ['ENSG00000121058|ENST00000240316|COIL'] 3023 13165 AFNWRHGVFV True PC9_epitope_Rep5 1231.62506111399 1231.62340490379 55.644 3 -0.4795906057376224 0.13620238828839332 0.9404178416890246 ['ENSG00000100889|ENST00000216780|PCK2', 'nc|ENSG00000100889|Q16822-3|PCK2'] 90958 4559 REYRDLTTA True NCI_RA007_Epitope_Rep4 1123.56218607391 1123.56055490379 23.938 3 -0.479667346549831 0.13624781413939546 0.9404635684053243 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000600238.1_1_19:17972170-17973061:+|nuORF'] 108961 18226 TAEKLIDLL True PC9_epitope_Rep3 1014.5961119711399 1014.59500993586 75.319 2 -0.47970595466670596 0.13624781413939546 0.94048655764339 ['ENST00000427378.1_1_7:134813580-134814228:+|nuORF'] 42211 5073 IDRYAQQDLKK True NCI_RA007_Epitope_Rep5 1376.7412130650398 1376.7395549037901 26.214 3 -0.47981483638245687 0.13627431388222755 0.9405513345790325 ['ENST00000494815.1_1_11:864058-865677:+|nuORF', 'ENSG00000214063|ENST00000397397|TSPAN4', 'ENST00000468468.5_1_11:864058-866627:+|nuORF'] 100061 17413 SIRPSWSSSTL True PC9_epitope_Rep3 1219.61970095003 1219.6186099358601 72.149 2 -0.4798291223232745 0.13627431388222755 0.9405598274886892 ['ENST00000575712.5_1_17:79009028-79031686:+|nuORF'] 120749 20855 VEKREQQRQVP True PC9_epitope_Rep1 1395.75826011151 1395.75716993586 85.044 2 -0.4798370946992082 0.13627431388222755 0.9405645663937474 ['HOXB8|p.E187Rfs*117|1|0.12|ENSG00000120068|chr17:48613375-48613376|-/T|frameshift_variant'] 57059 9545 LDSEWLGMP True H1975_Epitope_Rep2 1046.4742825863 1046.47318993586 41.686 2 -0.4798848098649756 0.1362864279766861 0.9405929196558337 ['nc|ENSG00000157119|Q2TBA0-2|KLHL40', 'ENSG00000157119|ENST00000287777|KLHL40'] 19590 15267 ELQKLVPKNDS True H1975_Epitope_Rep1 1269.6928658902898 1269.69176993586 63.992 2 -0.4799425869575981 0.1362864279766861 0.9406272304032696 ['ENSG00000198912|ENST00000361605|C1orf174', 'ENST00000486765.5_1_1:3806526-3811957:-|nuORF'] 15144 6483 EAAEALLNMD True NCI_RA007_Epitope_Rep2 1075.48557554599 1075.48446993586 29.827 2 -0.4799697623973536 0.13630081097733593 0.9406433603139746 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 107614 3999 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 20.508 2 -0.4800495748596111 0.13631519349896756 0.9406907027058878 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 18487 11392 EKERDFYFG True PC9_epitope_Rep4 1189.5403880001697 1189.53874490379 51.59 3 -0.480075688086026 0.13632503538423113 0.9407061825598538 ['ENSG00000101367|ENST00000375571|MAPRE1', 'ENST00000588085.1_1_18:32711911-32720330:+|nuORF', 'nc|ENSG00000166974|Q15555-4|MAPRE2', 'nc|ENSG00000166974|Q15555-5|MAPRE2', 'nc|ENSG00000166974|Q15555-3|MAPRE2', 'ENSG00000166974|ENST00000300249|MAPRE2'] 98679 15642 SGEDAFVF True PC9_epitope_Rep2 870.37594844402 870.3753949679301 65.442 1 -0.48008201170149145 0.13632503538423113 0.940709930461093 ['DCAF8L1|p.V310F|1|0.35|ENSG00000226372|chrX:27980407-27980407|C/A|missense_variant'] 124366 10891 VGTWMECSVSC True PC9_epitope_Rep5 1200.46135202744 1200.46024993586 46.88 2 -0.48010289967622033 0.13632503538423113 0.9407223084148928 ['nc|ENSG00000160323|Q76LX8-3|ADAMTS13', 'ENSG00000160323|ENST00000355699|ADAMTS13', 'nc|ENSG00000160323|Q76LX8|ADAMTS13', 'ADAMTS13|p.N1235Tfs*26|1|0.31|ENSG00000160323|chr9:133456202-133456202|C/-|frameshift_variant', 'ENST00000485925.5_1_9:136305545-136324175:+|nuORF'] 19811 12398 ELSNSWEL True PC9_epitope_Rep5 976.45017601344 976.44906993586 52.685 2 -0.4801743301277521 0.1363870989226901 0.9407646140201186 ['OR4K2|p.G16E|1|0.32|ENSG00000165762|chr14:19876314-19876314|G/A|missense_variant'] 106006 10901 SSVLWLDVHN True H1975_Epitope_Rep1 1168.58767254576 1168.58656993586 46.892 2 -0.4801759442444549 0.1363870989226901 0.940765569587069 ['ENSG00000118162|ENST00000338134|KPTN'] 129841 15474 VRRRARRHEPL True NCI_RA007_Epitope_Rep5 1444.8599802718 1444.8588899358601 66.218 2 -0.48022789393256654 0.13643477971294415 0.9407963143437128 ['ENST00000575334.5_3_16:4463394-4466616:-|nuORF', 'ENST00000575038.5_1_16:4463394-4466818:-|nuORF'] 64206 19427 LPGLGAPVE True PC9_epitope_Rep3 851.47526856247 851.47416993586 79.951 2 -0.4802407948853888 0.13644915832764448 0.940803946420413 ['ENSG00000119227|ENST00000412723|PIGZ'] 66548 21176 LSIDEEVYF True PC9_epitope_Rep3 1113.52300660053 1113.52190993586 86.741 2 -0.4802741277545082 0.13646126438121242 0.9408236604074414 ['ENST00000568329.5_1_15:75091021-75093212:+|nuORF', 'ENSG00000103653|ENST00000220003|CSK'] 41656 11265 IAFRRLSL True NCI_RA007_Epitope_Rep4 974.6025347642599 974.60142993586 50.223 2 -0.48027756594615084 0.13646126438121242 0.9408256934059918 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 65568 12408 LRRWKFRAMRK True NCI_RA007_Epitope_Rep1 1546.91432434378 1546.9126649037903 52.239 3 -0.4803591008695453 0.13649001881357908 0.9408738806036611 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 129026 8595 VQLVQDDP True H1975_Epitope_Rep3 912.4552613938799 912.45416993586 38.052 2 -0.48040269124008206 0.13649001881357908 0.9408996234219915 ['ENSG00000070476|ENST00000389709|ZXDC'] 58318 12299 LEMIFFIAI True PC9_epitope_Rep1 1095.6038402038698 1095.6027499358602 52.163 2 -0.4805978754149586 0.13658536585365855 0.9410147286403537 ['ENSG00000168158|ENST00000304936|OR2C1'] 46655 4831 ITDNTSSKQD True NCI_RA007_Epitope_Rep1 1107.50439641427 1107.50328993586 22.871 2 -0.48064297340542156 0.13658536585365855 0.9410412862222622 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000433411.7_1_17:18062924-18082138:+|nuORF'] 67320 9863 LSSDDSDVEA True H1975_Epitope_Rep2 1036.4196637307998 1036.4185699358602 42.924 2 -0.4807128468926814 0.13661411423909967 0.9410824057062103 ['ENSG00000135828|ENST00000367559|RNASEL', 'nc|ENSG00000135828|Q05823-2|RNASEL', 'RNASEL|p.A345Qfs*3|1|0.11|ENSG00000135828|chr1:182585774-182585774|C/-|frameshift_variant'] 69276 20774 LTTLELLEV True PC9_epitope_Rep6 1029.5957776179698 1029.59527496793 92.67 1 -0.480733673761919 0.13661411423909967 0.9410946554114562 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 109536 17576 TDRPLLSTL True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 72.615 2 -0.4808108043567395 0.13664513551308516 0.9411399948467348 ['ENSG00000198952|ENST00000361813|SMG5'] 45342 8935 IQDDC[Carbamidomethyl]TSQIKE True H1975_Epitope_Rep3 1335.59764545554 1335.5965499358601 39.367 2 -0.4808342498338815 0.13665950823219963 0.9411537685121918 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'nc|ENSG00000197816|Q9P1Z9-3|CCDC180', 'ENST00000487976.2_1_9:100136781-100139173:+|nuORF'] 140880 14106 YSEDKSSWD True H1975_Epitope_Rep2 1115.44073352855 1115.43962993586 59.414 2 -0.4810010773508913 0.13674046945230564 0.9412516652903742 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 84107 25356 PWRFRLLCL True PC9_epitope_Rep2 1202.6746541587 1202.6735499358601 103.21 2 -0.4810357410117464 0.13675256359035823 0.9412719821446968 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 96871 15222 SATARAFLV True PC9_epitope_Rep5 934.5236157372199 934.52250993586 63.56 2 -0.4811161495834644 0.13675256359035823 0.941319078606772 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 14584 8790 DTWESLQK True PC9_epitope_Rep1 1005.47672511445 1005.47562993586 38.652 2 -0.48113638867385655 0.1367669335641636 0.9413309258672743 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 112835 9691 TLISETLLNSP True NCI_RA007_Epitope_Rep2 1186.64451871554 1186.64342993586 42.315 2 -0.4811398393893865 0.13678130305955988 0.9413329455128135 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 101434 7649 SLKRSTIEL True NCI_RA007_Epitope_Rep3 1045.61315901761 1045.61206993586 37.211 2 -0.48135274612492246 0.1368789013732834 0.9414573966735265 ['ENST00000508743.1_1_17:46969858-46986323:-|nuORF'] 20142 8230 ENDIRSCSLA True H1975_Epitope_Rep1 1106.50262259246 1106.5015299358602 36.601 2 -0.4813799164926323 0.13689326852653305 0.9414732561003673 ['VAV3|p.C196S|1|0.28|ENSG00000134215|chr1:107770697-107770697|C/G|missense_variant'] 57630 8631 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 38.151 2 -0.4814110615155065 0.1369030776144743 0.9414914292697014 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 131555 16515 VTLDNVTL True PC9_epitope_Rep1 873.48074786573 873.47964993586 68.348 2 -0.48141400888416314 0.1369030776144743 0.9414931487167881 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 1554 13982 AEEQTAVAI True PC9_epitope_Rep1 930.4658260775798 930.46472993586 58.621 2 -0.48145058256475826 0.1369030776144743 0.9415144802175517 ['USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'USF2|p.P41A|1|0.69|ENSG00000105698|chr19:35269592-35269592|C/G|missense_variant', 'ENST00000593708.1_1_19:35760385-35760731:+|nuORF', 'nc|ENSG00000105698|Q15853-4|USF2', 'nc|ENSG00000105698|Q15853-3|USF2', 'nc|ENSG00000105698|Q15853-2|USF2', 'ENSG00000105698|ENST00000222305|USF2'] 6450 8218 APSEVAAIAP True H1975_Epitope_Rep2 924.4916469025998 924.49054993586 36.563 2 -0.4814658520570766 0.13691288572284543 0.9415233833748543 ['nc|ENSG00000180329|Q96MW1-2|CCDC43', 'ENSG00000180329|ENST00000315286|CCDC43'] 98515 10205 SFLRCYRP True PC9_epitope_Rep2 1040.5225701913998 1040.52146993586 44.59 2 -0.48149250165673063 0.13691288572284543 0.9415389180569219 ['ENST00000392975.6_1_17:61511323-61511650:-|nuORF'] 133244 8049 VVTGLSSLHCH True H1975_Epitope_Rep1 1151.5757279630702 1151.57462993586 35.904 2 -0.48149276180490097 0.13691288572284543 0.9415390696792896 ['ENST00000435033.1_1_19:12491157-12492084:-|nuORF'] 82726 13814 PRECYCSL True PC9_epitope_Rep5 969.4048231274899 969.40372993586 58.154 2 -0.4815633353610523 0.13694389427957993 0.9415801848810779 ['ENST00000309993.2_1_3:135913869-135914463:-|nuORF'] 72148 18789 MFVFKERWFWR True PC9_epitope_Rep2 1630.8231092975398 1630.82200993586 77.641 2 -0.48162910962138633 0.13698698532103984 0.9416184731678261 ['ENSG00000157227|ENST00000311852|MMP14'] 38540 4560 HESILKWMC True H1975_Epitope_Rep2 1145.53617165021 1145.53453490379 22.647 3 -0.48163300041097074 0.13698698532103984 0.9416207371273103 ['ENSG00000080298|ENST00000617270|RFX3', 'nc|ENSG00000080298|P48380-2|RFX3'] 78714 10737 PAAAALAQ True PC9_epitope_Rep5 711.3915389385099 711.39099496793 46.292 1 -0.48168259465636565 0.13698698532103984 0.941649585727919 ['ENST00000241041.7_1_11:45935474-45935997:-|nuORF'] 80231 2700 PGALQTNP True NCI_RA007_Epitope_Rep2 796.40791727864 796.40682993586 14.728 2 -0.48170598637553075 0.1369951911077092 0.9416631866405497 ['nc|ENSG00000131323|Q13114-2|TRAF3', 'ENSG00000131323|ENST00000392745|TRAF3'] 44817 13644 INALADAIN True NCI_RA007_Epitope_Rep4 913.48689587533 913.4863449679301 59.702 1 -0.4817064899270536 0.1369951911077092 0.9416634793848326 ['ENST00000465687.1_1_3:88367908-88368169:+|nuORF'] 135287 10367 WFTMSFSYY True H1975_Epitope_Rep1 1230.50558271458 1230.5044899358602 44.825 2 -0.48171508913191297 0.1369951911077092 0.9416684783419923 ['nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 71232 23420 LYPGIVTFVI True PC9_epitope_Rep3 1120.65323292444 1120.65212993586 95.363 2 -0.48174308127501647 0.1369951911077092 0.9416847474317013 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1'] 71124 20482 LYLPQEMSAV True NCI_RA007_Epitope_Rep4 1149.57399662757 1149.57347496793 88.695 1 -0.4817561319415314 0.1369951911077092 0.9416923306637245 ['ENSG00000111647|ENST00000279907|BLTP3B', 'nc|ENSG00000111647|A0JNW5-2|BLTP3B'] 102226 14488 SLSERDVLL True PC9_epitope_Rep6 1030.5658744720197 1030.56476993586 67.612 2 -0.4817708259507686 0.1369951911077092 0.941700867376704 ['SLC18A3|p.R479L|1|0.21|ENSG00000187714|chr10:49612176-49612176|G/T|missense_variant'] 141946 4749 YVHKDGLNS True NCI_RA007_Epitope_Rep2 1031.5036085686297 1031.5025099358602 23.103 2 -0.4817945494951809 0.1369951911077092 0.9417146468066205 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2'] 57625 11599 LEEEEEEDP True PC9_epitope_Rep1 1117.4298940613298 1117.42878993586 49.493 2 -0.48179605195172437 0.1369951911077092 0.9417155193535367 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 100353 22786 SKQRRSRRKK True PC9_epitope_Rep4 1328.8225321339198 1328.8214299358601 95.867 2 -0.4818514077974912 0.1369951911077092 0.9417476562777245 ['ENSG00000122859|ENST00000242462|NEUROG3'] 64309 7845 LPKSSRNFEKP True H1975_Epitope_Rep1 1301.70918466077 1301.70808993586 35.126 2 -0.48192162949535555 0.1369951911077092 0.9417883933295442 ['nc|ENSG00000152990|Q8IWK6-3|ADGRA3', 'ENSG00000152990|ENST00000334304|ADGRA3'] 57009 21843 LDRLRKKRHLL True NCI_RA007_Epitope_Rep3 1446.9259345732999 1446.92428490379 94.887 3 -0.4819480576113769 0.1369951911077092 0.9418037160628867 ['ENSG00000178605|ENST00000326153|GTPBP6'] 107836 11365 SVVEDMILK True NCI_RA007_Epitope_Rep3 1032.5525329069999 1032.5514299358601 51.822 2 -0.48200479460668 0.13707154742096506 0.9418365953821022 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000472593.1_1_3:183521690-183528368:+|nuORF', 'ENST00000481343.1_1_3:183525829-183527073:+|nuORF'] 52644 17188 KLRKVAKMGP True PC9_epitope_Rep6 1126.7008689065399 1126.69976993586 78.703 2 -0.48200690808315005 0.13707154742096506 0.9418378197241936 ['ENSG00000172890|ENST00000319023|NADSYN1', 'ENST00000531236.1_1_11:71196518-71209628:+|nuORF', 'nc|ENSG00000172890|Q6IA69-2|NADSYN1', 'NADSYN1|p.G602V|1|0.16|ENSG00000172890|chr11:71497523-71497523|G/T|missense_variant', 'ENST00000530831.1_1_11:71208417-71209628:+|nuORF'] 33810 19795 GLLRNRGPG True PC9_epitope_Rep6 938.5409971368598 938.53990993586 88.798 2 -0.4820194825395936 0.13707154742096506 0.9418451035050664 ['ENSG00000137714|ENST00000260270|FDX1'] 17330 16121 EHAPSIIFM-[Oxidation] True PC9_epitope_Rep3 1059.5059174481898 1059.50480993586 67.159 2 -0.4820665564603248 0.13708590539258914 0.9418723615612962 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 109681 13363 TECKPQSQSL True PC9_epitope_Rep1 1119.52302368387 1119.52192993586 56.26 2 -0.482094169819593 0.13711690126784468 0.9418883439617571 ['ENST00000370491.7_1_1:89435115-89458421:-|nuORF', 'ENST00000321792.5_1_1:89449705-89458421:-|nuORF', 'ENST00000260508.8_1_1:89453981-89458544:-|nuORF'] 18819 17422 ELDLMPYTPP True PC9_epitope_Rep6 1174.5580122102601 1174.5569099358602 79.629 2 -0.48215132789903803 0.13713125800708784 0.941921410047769 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1'] 122779 14422 VGGPEIEVG True PC9_epitope_Rep2 855.4337976733099 855.43270993586 60.744 2 -0.48218599580335897 0.1371554061922904 0.9419414546320707 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 16192 12560 EEEEDEEAL True PC9_epitope_Rep2 1091.41424399719 1091.41314993586 53.619 2 -0.48224127327280925 0.1371554061922904 0.9419733984472594 ['ENSG00000214753|ENST00000301785|HNRNPUL2'] 99443 19829 SIAIGSQPV True PC9_epitope_Rep3 870.4810822189 870.47998993586 81.507 2 -0.48226256832596237 0.1371554061922904 0.9419856988931234 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1'] 136202 11073 WRRWNRFNRR True H1975_Epitope_Rep1 1545.8290144966898 1545.82735490379 47.555 3 -0.4822650950978613 0.1371554061922904 0.9419871582013664 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 2316 8678 AEPFPFRRPER True NCI_RA007_Epitope_Rep2 1400.7313170876798 1400.72968490379 38.402 3 -0.4823006752207031 0.13716976109669263 0.9420077024690783 ['ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-3|TCAF2', 'nc|ENSG00000170379|A6NFQ2-2|TCAF2', 'ENSG00000283528|ENST00000636941|TCAF2C'] 99534 17496 SIDVFEDYI True PC9_epitope_Rep1 1099.5073565363898 1099.50624993586 72.094 2 -0.4823631456281084 0.1371984694726335 0.942043752529964 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 87464 8069 QQDIDDLK True H1975_Epitope_Rep1 973.47163973401 973.4710949679301 35.98 1 -0.48238093083439165 0.1371984694726335 0.9420540110491076 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 59496 14920 LFRGQISETL True PC9_epitope_Rep4 1162.6346227381798 1162.63352993586 65.33 2 -0.4824265394839977 0.1372271759382486 0.9420803083012674 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 59026 9944 LEVPGLFWT True PC9_epitope_Rep5 1060.5593325395998 1060.55822993586 43.223 2 -0.4824289272027184 0.1372271759382486 0.942081684633263 ['nc|ENSG00000185436|Q8IU57-4|IFNLR1'] 64565 13616 LPSESLGAPDP True H1975_Epitope_Rep2 1081.5291546101298 1081.52804993586 57.512 2 -0.4824676278454176 0.1372369624885636 0.9421039870968648 ['ENST00000220562.8_1_8:28608908-28609217:+|nuORF'] 121568 14940 VFDYEAAG True PC9_epitope_Rep4 870.3759484440199 870.3753949679301 65.407 1 -0.48249087011764463 0.1372369624885636 0.942117376289215 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant'] 16566 7709 EELTKTGKY True H1975_Epitope_Rep1 1067.54989005471 1067.5487899358602 34.615 2 -0.4825259344605952 0.1372369624885636 0.9421375688770315 ['FAM47B|p.P377T|1|0.24|ENSG00000189132|chrX:34943960-34943960|C/A|missense_variant'] 123597 6660 VGQDGQVL True NCI_RA007_Epitope_Rep4 814.4184819623399 814.41738993586 32.239 2 -0.4825510016865656 0.137251314126023 0.9421519992766049 ['ENST00000466847.5_1_16:88068919-88110264:+|nuORF', 'nc|ENSG00000172530|Q8N9N5-3|BANP', 'nc|ENSG00000172530|Q8N9N5-6|BANP', 'nc|ENSG00000172530|Q8N9N5-2|BANP', 'nc|ENSG00000172530|Q8N9N5-7|BANP'] 57160 6188 LDTSDLEP True PC9_epitope_Rep5 888.40764249512 888.40654993586 28.787 2 -0.4826245328891385 0.13726566528602557 0.9421943042045285 ['ENSG00000175087|ENST00000374269|PDIK1L'] 74494 21529 NFFYNYMMGI True PC9_epitope_Rep3 1298.5464019807398 1298.5453099358601 88.105 2 -0.4826827286178516 0.1373109998502969 0.9422277601032497 ['ENSG00000172893|ENST00000355527|DHCR7', 'ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 95074 12347 RTWLPWRRIMK True NCI_RA007_Epitope_Rep2 1541.8765418527298 1541.8748849037902 52.633 3 -0.48269480051458713 0.1373109998502969 0.9422346971876477 ['ENST00000442868.1_1_1:202822165-202825009:-|nuORF'] 117958 17474 TYAGLHVLL True PC9_epitope_Rep3 985.55966689277 985.55856993586 72.392 2 -0.48277481439980025 0.13735861610113106 0.9422806519824451 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 35901 12283 GTPLSPGSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 52.235 2 -0.4828311320467542 0.13736154076439477 0.942312971182481 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-2|SLCO4A1'] 42171 12151 IDQEYMVYMFK True H1975_Epitope_Rep1 1465.6621600089695 1465.66106993586 51.756 2 -0.4828438907935021 0.13736154076439477 0.9423202901045011 ['GAPDHS|p.P111Q|1|0.22|ENSG00000105679|chr19:35538393-35538393|C/A|missense_variant'] 112909 17253 TLLADIYMDSD True PC9_epitope_Rep2 1255.56421978951 1255.5631299358602 71.624 2 -0.48289106453040626 0.13736154076439477 0.9423473412613551 ['ENSG00000141179|ENST00000268896|PCTP'] 31268 16363 GDFGSATF True PC9_epitope_Rep1 800.33408363204 800.3335349679301 67.76 1 -0.4829044383504664 0.13736154076439477 0.9423550075633105 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF'] 87019 16964 QMPTVHYEF True PC9_epitope_Rep2 1150.5117307241799 1150.5106299358602 70.5 2 -0.48291410725235884 0.13736154076439477 0.9423605493342551 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 96112 19704 RYMRIYRRYIY True PC9_epitope_Rep3 1651.8769357755498 1651.87582993586 81.02 2 -0.48294615917820016 0.13736154076439477 0.9423789155076648 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 79817 12202 PEFDWQDP True H1975_Epitope_Rep2 1032.4188758851599 1032.4177699358602 52.017 2 -0.48301800522788374 0.13740915063116405 0.9424200590183834 ['nc|ENSG00000105607|Q92947-2|GCDH', 'ENSG00000105607|ENST00000222214|GCDH', 'ENST00000590627.5_1_19:13002616-13004571:+|nuORF', 'ENST00000585420.5_1_19:13002616-13007066:+|nuORF', 'ENST00000587832.5_1_19:13002118-13004571:+|nuORF', 'ENST00000421816.6_1_19:13002118-13008243:+|nuORF', 'ENST00000591043.1_1_19:13002118-13008243:+|nuORF', 'GCDH|p.S44W|1|0.41|ENSG00000105607|chr19:12891834-12891834|C/G|missense_variant'] 136195 7257 WRRWCWRWPWR True NCI_RA007_Epitope_Rep2 1772.8735221609597 1772.87242993586 32.847 2 -0.4830354680864513 0.137416640335268 0.9424300540704161 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 67447 3989 LSSQNFTLTK True NCI_RA007_Epitope_Rep3 1137.60298825673 1137.60133490379 22.095 3 -0.4830442965366115 0.137416640335268 0.9424351063440778 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159681329-159707642:-|nuORF'] 73877 9104 NATMNSFLEYP True H1975_Epitope_Rep3 1285.5648884958498 1285.56378993586 40.007 2 -0.4830615518039384 0.137416640335268 0.942444979529619 ['HOXA1|p.R5T|1|0.14|ENSG00000105991|chr7:27095899-27095899|C/G|missense_variant'] 67191 8658 LSRDGQVYL True H1975_Epitope_Rep3 1049.5505587610498 1049.54946993586 38.299 2 -0.4830947319936882 0.137416640335268 0.9424639590543994 ['ENST00000471308.5_1_3:51992122-51994256:-|nuORF'] 17742 4390 EHRGPVQVT True PC9_epitope_Rep6 1021.53049202281 1021.52938993586 24.002 2 -0.48319928602435114 0.13743098516596822 0.9425237168620999 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 58796 9223 LESLKNAGSL True PC9_epitope_Rep6 1030.56587447202 1030.56476993586 45.62 2 -0.4832308091993545 0.1374596733960821 0.9425417194725714 ['ENSG00000168038|ENST00000301831|ULK4', 'ENST00000489118.1_1_3:41288422-41292488:-|nuORF'] 93861 20270 RREEWKPYWMR True NCI_RA007_Epitope_Rep2 1635.8092501385497 1635.80814993586 83.877 2 -0.4832802473104151 0.1374596733960821 0.9425699396800093 ['ENST00000499685.2_1_12:92539993-92577930:+|nuORF'] 75639 12805 NLEKCMSELWR True H1975_Epitope_Rep1 1407.66389134447 1407.66278993586 54.318 2 -0.48334169047657155 0.1374883597179726 0.942604989693183 ['ENSG00000128298|ENST00000381669|BAIAP2L2', 'nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'BAIAP2L2|p.S465Afs*27|1|0.17|ENSG00000128298|chr22:38086317-38086317|G/-|frameshift_variant'] 16965 19807 EFVKQLCL True PC9_epitope_Rep1 978.5208388558999 978.51974993586 81.003 2 -0.48335150561390955 0.1374883597179726 0.9426105863496023 ['ENSG00000127080|ENST00000287996|IPPK'] 30797 7520 GANICWFISSK True NCI_RA007_Epitope_Rep2 1224.59612905448 1224.59502993586 33.877 2 -0.48336254977797044 0.13749812933371025 0.942616883031413 ['ENST00000461275.1_1_7:81680257-81714133:-|nuORF'] 83866 5021 PVPAPRREQP True H1975_Epitope_Rep2 1145.63054041725 1145.62888490379 24.396 3 -0.48337474773554046 0.13749812933371025 0.9426238365809847 ['ENST00000369651.7_1_6:86159527-86159740:+|nuORF'] 2781 7277 AETTKETENNV True H1975_Epitope_Rep1 1234.5677249468201 1234.5666299358602 33.002 2 -0.4833893851631015 0.13749812933371025 0.9426321794522783 ['ENSG00000088205|ENST00000263239|DDX18'] 136854 16709 YADPSILYI True NCI_RA007_Epitope_Rep4 1053.5382627418498 1053.53767496793 72.456 1 -0.48343012212056774 0.13752681199181924 0.9426553906592997 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 30547 7613 GAGSSGSR True NCI_RA007_Epitope_Rep1 677.30926586653 677.3087149679301 33.606 1 -0.48343697372332084 0.13752681199181924 0.9426592934887886 ['ENST00000491557.2_1_10:77163552-77167502:+|nuORF'] 15152 3409 EAAERVESA True H1975_Epitope_Rep1 960.4512386425998 960.4501499358599 17.282 2 -0.48349016413116047 0.13753886570340687 0.9426895812491644 ['nc|ENSG00000230487|Q96PY0|PSMG3-AS1', 'ENST00000437621.6_1_7:1626575-1627631:+|nuORF'] 27207 20884 FLMDHVFIQ True PC9_epitope_Rep4 1148.5688516774799 1148.56774993586 88.488 2 -0.48351840756267145 0.13753886570340687 0.9427056559548997 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3'] 22262 9916 ETAWSPPTVP True H1975_Epitope_Rep2 1083.5236753068698 1083.52256993586 43.131 2 -0.4837011920005502 0.13756983240223464 0.94280955829034 ['ENST00000420902.1_1_22:50008608-50009004:-|nuORF'] 67542 13407 LSTNPEPLPP True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 56.85 2 -0.48371419280291866 0.13758188408206698 0.9428169399783862 ['ENSG00000188305|ENST00000342063|PEAK3'] 139685 22584 YNGTLDILI True PC9_epitope_Rep1 1020.5491617787198 1020.5485749679301 91.676 1 -0.48373760338662786 0.13758188408206698 0.9428302293583259 ['ENSG00000174898|ENST00000381624|CATSPERD'] 55381 12334 LAEQKCEEWR True H1975_Epitope_Rep1 1290.6026709868997 1290.6015699358602 52.472 2 -0.4837854860864306 0.13759622258799276 0.9428573993134063 ['nc|ENSG00000009790|Q9Y228-3|TRAF3IP3', 'nc|ENSG00000009790|Q9Y228-2|TRAF3IP3', 'ENSG00000009790|ENST00000367025|TRAF3IP3', 'ENST00000476050.5_1_1:209948949-209949477:+|nuORF'] 9663 19512 AYELLRGRR True H1975_Epitope_Rep3 1132.6465248345598 1132.6454299358602 81.768 2 -0.4839042512306062 0.13765814893015677 0.942924723875174 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 7771 4269 ASRRTRGP True NCI_RA007_Epitope_Rep5 899.5049459813099 899.50384993586 22.994 2 -0.4839175088314103 0.13765814893015677 0.942932233395214 ['ENST00000455372.2_1_19:2737365-2739999:-|nuORF'] 12473 6929 DKAAVVKFHP True H1975_Epitope_Rep3 1110.61857875122 1110.61748993586 31.613 2 -0.484011163727861 0.13774874071118648 0.9429852491199157 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 80569 11582 PGPSASSLL True PC9_epitope_Rep1 827.43888305375 827.43778993586 49.428 2 -0.484019394178034 0.13774874071118648 0.9429899053839869 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 102695 15938 SLYYDYEPPYY True H1975_Epitope_Rep2 1471.61836353735 1471.6172699358601 66.504 2 -0.48402330279610395 0.13774874071118648 0.9429921164731302 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2'] 114714 6927 TQIDPNWV True NCI_RA007_Epitope_Rep4 971.47124581119 971.47014993586 33.267 2 -0.4840427217126562 0.13774874071118648 0.9430031001677821 ['ENSG00000186340|ENST00000617924|THBS2', 'ENST00000488355.1_1_6:169617703-169623454:-|nuORF'] 48950 4785 KEEIVFRYYH True H1975_Epitope_Rep3 1382.6982856239 1382.69665490379 23.531 3 -0.4841539764082495 0.1377774083617322 0.9430659795451923 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 73631 7068 MWRDDREQFYK True NCI_RA007_Epitope_Rep2 1572.7143466942 1572.7126949037902 32.117 3 -0.4841575295688617 0.1377774083617322 0.9430679863800419 ['ENST00000477954.5_1_21:46191294-46194726:-|nuORF', 'ENST00000481546.1_1_21:46191294-46193735:-|nuORF', 'ENST00000491513.5_1_21:46191294-46199096:-|nuORF', 'nc|ENSG00000184787|P60604-2|UBE2G2', 'ENST00000497630.5_1_21:46191294-46221727:-|nuORF', 'ENSG00000184787|ENST00000345496|UBE2G2'] 23520 21312 EVVNKDVLDVY True H1975_Epitope_Rep2 1291.66598243611 1291.6648899358602 88.19 2 -0.4842232986781792 0.1377894509367156 0.943105117824837 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7', 'MCM7|p.P175Tfs*11|1|0.29|ENSG00000166508|chr7:100099082-100099083|-/T|frameshift_variant'] 9546 8469 AVYTLSEF True NCI_RA007_Epitope_Rep3 928.4541987647199 928.45310993586 40.392 2 -0.4842879050902736 0.1377894509367156 0.9431415649119101 ['ENSG00000156795|ENST00000287387|NTAQ1', 'nc|ENSG00000156795|Q96HA8-2|NTAQ1'] 100642 11078 SLDFYSMVYP True NCI_RA007_Epitope_Rep1 1220.5423621461198 1220.54126993586 47.088 2 -0.4843285031935659 0.1378536520496027 0.9431644537913249 ['ENST00000556803.1_1_14:23820757-23821058:-|nuORF'] 121743 15048 VFLVAELKN True H1975_Epitope_Rep2 1031.6015317047497 1031.6004299358601 63.033 2 -0.4844009522831486 0.1378656914893617 0.9432052728857521 ['ENSG00000259823|ENST00000590317|LYPD8'] 80684 10171 PGVLKVVS True PC9_epitope_Rep6 797.50108938749 797.49998993586 49.753 2 -0.48442775482792977 0.1378656914893617 0.9432203651123486 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 58546 13944 LEQKYVQLF True NCI_RA007_Epitope_Rep4 1166.6335601090198 1166.6324699358602 60.912 2 -0.4845475413889267 0.13789205990392767 0.9432877576234204 ['SPATA31D1|p.P1525Hfs*33|1|0.1|ENSG00000214929|chr9:81995043-81995043|C/-|frameshift_variant', 'ENSG00000214929|ENST00000344803|SPATA31D1', 'ENSG00000189357|ENST00000419782|SPATA31D4', 'ENSG00000186788|ENST00000445385|SPATA31D3'] 114063 10075 TPEQIEKIY True H1975_Epitope_Rep3 1119.5811901829898 1119.58008993586 43.792 2 -0.4845568002593985 0.13789205990392767 0.9432929627647342 ['ENSG00000086288|ENST00000199447|NME8'] 82164 21367 PNLVAVCLAA True PC9_epitope_Rep1 969.5317378927699 969.53064993586 87.02 2 -0.4845689374172644 0.13789205990392767 0.9432997851615816 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 131874 6998 VTRIQRFQD True NCI_RA007_Epitope_Rep4 1161.6254550368099 1161.62380490379 33.543 3 -0.4845991566496856 0.13792071802543007 0.9433167674200521 ['ENSG00000140525|ENST00000310775|FANCI', 'FANCI|p.T1069Sfs*39|1|0.09|ENSG00000140525|chr15:89305359-89305360|-/G|frameshift_variant', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI'] 60469 18719 LGWRRWRP True PC9_epitope_Rep1 1125.6308152007698 1125.62970993586 76.792 2 -0.48461668508860256 0.13792071802543007 0.9433266150917214 ['ENST00000421814.6_1_5:162932622-162940637:+|nuORF'] 76465 18242 NQFSLQLN True PC9_epitope_Rep4 962.4821448480599 962.48159496793 78.237 1 -0.4846515219727708 0.13793504637170495 0.943346180827086 ['nc|ENSG00000211933|A0A0B4J1U7|IGHV6-1'] 36187 18201 GVAVSDVGEC True PC9_epitope_Rep3 934.4065969492999 934.40548993586 75.22 2 -0.48467577898384284 0.137947081505119 0.9433597997752868 ['ERICH3|p.S945C|1|0.14|ENSG00000178965|chr1:74572877-74572877|T/A|missense_variant'] 7961 7434 ATCYLMLQFVP True H1975_Epitope_Rep1 1284.62465230144 1284.6235499358602 33.598 2 -0.48473915269578205 0.137947081505119 0.9433953622650225 ['ENST00000299977.8_1_17:33586011-33586149:+|nuORF'] 63048 2850 LLQEDIRRHRN True H1975_Epitope_Rep1 1448.7960426025597 1448.7943949037901 14.583 3 -0.48480001765751457 0.13799006165760916 0.9434294920746071 ['ENST00000511797.5_1_4:2869713-2869782:+|nuORF'] 83498 13401 PTSAFSQFQ True PC9_epitope_Rep4 1011.4661604307498 1011.46557496793 59.448 1 -0.4848101359947058 0.13799006165760916 0.9434351635342589 ['ENSG00000173546|ENST00000308508|CSPG4'] 120098 10963 VDWWSVWVMAY True H1975_Epitope_Rep2 1440.6536439306 1440.6525499358602 47.198 2 -0.4848572220586356 0.13799006165760916 0.9434615470339811 ['STK32C|p.G282W|1|0.24|ENSG00000165752|chr10:132225265-132225265|C/A|missense_variant'] 110022 17108 TEKFC[Carbamidomethyl]FYL True PC9_epitope_Rep1 1106.5106683744498 1106.50956993586 70.632 2 -0.4849115820529096 0.13805195021022718 0.9434919881890614 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 77723 13742 NTLGALPI True NCI_RA007_Epitope_Rep5 797.46470387877 797.4641549679301 59.541 1 -0.48491621748406705 0.13805195021022718 0.9434945830958692 ['ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-2|PAQR4'] 80352 11462 PGGLFGTSS True PC9_epitope_Rep4 821.39193286133 821.3913849679301 51.852 1 -0.4849555627142821 0.1380805982550893 0.9435166028244213 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 70826 11484 LYCQTLSELPW True NCI_RA007_Epitope_Rep4 1351.64822419699 1351.6471299358602 51.107 2 -0.4849646534811051 0.1380805982550893 0.9435216890705791 ['ENST00000588753.1_1_21:47660768-47664506:+|nuORF'] 126410 6446 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 31.462 3 -0.4851336115885101 0.1381281574049455 0.943616122316896 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 87124 12058 QNVVVTEAVKE True PC9_epitope_Rep3 1214.65066672514 1214.6495699358602 51.422 2 -0.48516885366754875 0.13814018412044268 0.9436357962563066 ['nc|ENSG00000154645|Q9H9P2-3|CHODL'] 109456 7339 TDLCWTFSP True H1975_Epitope_Rep2 1068.45863252216 1068.45752993586 33.17 2 -0.48520967676971627 0.13814018412044268 0.9436585757543393 ['ENST00000491475.1_1_10:123324010-123325402:-|nuORF'] 54787 22671 KYNLATEEI True PC9_epitope_Rep1 1079.54989005471 1079.5487899358602 92.008 2 -0.4852382074643005 0.13818085141736733 0.9436744896296348 ['ENSG00000109436|ENST00000442267|TBC1D9', 'TBC1D9|p.G735Efs*4|1|0.16|ENSG00000109436|chr4:140657530-140657530|C/-|frameshift_variant'] 116368 5192 TTFTSSTA True NCI_RA007_Epitope_Rep5 814.37086306358 814.3703149679301 26.667 1 -0.4852533910425919 0.13818085141736733 0.9436829565959962 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 99573 7131 SIENHCSV True PC9_epitope_Rep5 887.3807165546301 887.37960993586 32.399 2 -0.48525885435332516 0.13818085141736733 0.9436860027911601 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'ENST00000343889.8_1_1:2411150-2434522:+|nuORF'] 99518 15561 SIDPESNIISI True NCI_RA007_Epitope_Rep1 1186.60813320682 1186.60702993586 64.614 2 -0.4852717837160805 0.13818085141736733 0.9436932110893914 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 93921 19350 RRGGGHAG True PC9_epitope_Rep6 766.3946672563399 766.39356993586 87.078 2 -0.4853118145643426 0.13821178738181877 0.9437155220102709 ['ENST00000357360.4_1_X:153707219-153707480:-|nuORF'] 135951 22774 WQCDYDNDCGD True NCI_RA007_Epitope_Rep5 1332.4023164978398 1332.4006649037901 94.807 3 -0.485373990689216 0.13822610660640702 0.9437501550154375 ['ENSG00000123384|ENST00000243077|LRP1'] 46796 9036 ITGLAESLQL True NCI_RA007_Epitope_Rep5 1043.58627556343 1043.5851699358602 41.415 2 -0.48538130989721906 0.13825704079089474 0.9437542302878402 ['POU3F1|p.D374E|1|0.33|ENSG00000185668|chr1:38045622-38045622|G/T|missense_variant'] 66521 18255 LSHNLSLVI True PC9_epitope_Rep3 994.58113061334 994.58002993586 75.428 2 -0.48540638714630163 0.1383045891071013 0.9437681904815504 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1', 'ENST00000528996.1_1_11:57374185-57382051:+|nuORF', 'nc|ENSG00000149131|P05155-2|SERPING1'] 94564 22833 RRRWVRLRRRD True PC9_epitope_Rep1 1623.9770757127096 1623.9759699358601 92.624 2 -0.48554401170656625 0.1383853656105139 0.9438447327880389 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 62856 12632 LLMIPQQALAQ True H1975_Epitope_Rep1 1224.69002943932 1224.6889299358602 53.64 2 -0.4856012023680804 0.13843291021466073 0.9438765048821879 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 21379 12496 ERHYFREHLLK True NCI_RA007_Epitope_Rep1 1526.81063003754 1526.8095299358602 52.586 2 -0.4857487966858167 0.13851368190200866 0.9439584046855952 ['ENSG00000175970|ENST00000344651|UNC119B'] 413 12275 AALGTMTSL True NCI_RA007_Epitope_Rep4 863.4422541820301 863.44170496793 54.212 1 -0.48574969773348825 0.1385233918128655 0.9439589042526941 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'ENST00000496783.1_1_21:43708308-43714771:+|nuORF', 'ENST00000472587.5_1_21:43696971-43716499:+|nuORF', 'nc|ENSG00000160179|P45844-8|ABCG1'] 98110 5098 SESESDDEGP True NCI_RA007_Epitope_Rep5 1050.3625427774998 1050.36144993586 26.307 2 -0.4857517344245402 0.1385233918128655 0.9439600334347442 ['ENSG00000136197|ENST00000350427|C7orf25', 'nc|nan|Q9BPX7-2|C7orf25'] 79137 9466 PALQDPRRRR True NCI_RA007_Epitope_Rep2 1263.7272347667497 1263.7261299358602 41.431 2 -0.4857594135907464 0.1385233918128655 0.9439642906823106 ['ENST00000538906.5_2_16:31084355-31084742:-|nuORF'] 120871 10053 VEMQTMQRL True PC9_epitope_Rep1 1134.55254999034 1134.55090490379 43.537 3 -0.485853516914112 0.13856862810246867 0.9440164304402991 ['SPEF2|p.D1760Tfs*2|1|0.1|ENSG00000152582|chr5:35807152-35807152|G/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2', 'SPEF2|p.T939Yfs*14|1|0.13|ENSG00000152582|chr5:35709093-35709094|-/C|frameshift_variant', 'SPEF2|p.I293Sfs*23|1|0.1|ENSG00000152582|chr5:35654619-35654619|A/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-3|SPEF2', 'ENST00000505088.1_1_5:35618099-35641794:+|nuORF', 'ENST00000505847.5_2_5:35618099-35643627:+|nuORF'] 69752 8116 LVFLQVFKC True H1975_Epitope_Rep3 1095.61507359391 1095.61396993586 36.194 2 -0.48586129038425224 0.13856862810246867 0.9440207349953038 ['ENST00000264170.8_1_2:143742732-143743560:+|nuORF'] 26993 14234 FLELCTQQVL True NCI_RA007_Epitope_Rep1 1192.6161957927202 1192.6150899358602 59.406 2 -0.48598012304528104 0.13861386138613863 0.9440864914630958 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1'] 66422 5166 LSGLSTEEY True H1975_Epitope_Rep3 997.4604063439699 997.45930993586 24.971 2 -0.48598089989788545 0.13861386138613863 0.9440869210471752 ['PDE5A|p.I706T|1|0.06|ENSG00000138735|chr4:119507676-119507676|A/G|missense_variant'] 66898 12384 LSNLQRTKRQP True H1975_Epitope_Rep1 1339.76843087239 1339.76732993586 52.668 2 -0.4860855779086192 0.13862817083907836 0.9441447715814395 ['ENST00000541377.5_1_2:122363504-122363705:-|nuORF'] 30716 18137 GALGPGITDAL True PC9_epitope_Rep6 983.52876068731 983.52766993586 82.401 2 -0.4861338449521466 0.13864017674712203 0.9441714235697776 ['nc|ENSG00000144488|Q6ZVH7-2|ESPNL', 'ESPNL|p.L275Sfs*16|1|0.21|ENSG00000144488|chr2:238107936-238107936|C/-|frameshift_variant', 'ENSG00000144488|ENST00000343063|ESPNL'] 101940 6858 SLQALTEMDGP True NCI_RA007_Epitope_Rep2 1160.53833939484 1160.53724993586 31.292 2 -0.4861344147403399 0.13864017674712203 0.9441717381080467 ['nc|ENSG00000080802|O95628-6|CNOT4', 'nc|ENSG00000080802|O95628-8|CNOT4', 'nc|ENSG00000080802|O95628-4|CNOT4', 'nc|ENSG00000080802|O95628-9|CNOT4', 'ENSG00000080802|ENST00000541284|CNOT4'] 9241 20820 AVPDLYFENA True PC9_epitope_Rep3 1137.53423999057 1137.5331499358601 85.355 2 -0.4861809423290008 0.13867109634551494 0.9441974158070879 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 43743 9905 IHGRVCWTP True PC9_epitope_Rep6 1067.53346922827 1067.53236993586 48.609 2 -0.4862611801238701 0.13871171350740816 0.9442416661752236 ['ENST00000229829.6_1_6:32974298-32974526:-|nuORF'] 86514 10987 QLALEEKAV True PC9_epitope_Rep4 999.5600608155898 999.55896993586 50.036 2 -0.486262663392158 0.13871171350740816 0.944242483810431 ['ENSG00000130300|ENST00000252590|PLVAP'] 98268 14529 SEVFHVNISL True PC9_epitope_Rep4 1143.59242357303 1143.5913299358601 63.801 2 -0.48627479218290914 0.13871171350740816 0.9442491691647963 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant'] 126105 11509 VLERDLVL True PC9_epitope_Rep3 955.5702315764698 955.56912993586 49.271 2 -0.48628553679090897 0.13871171350740816 0.9442550908070146 ['ENST00000511314.5_1_4:145569905-145576060:+|nuORF', 'ENST00000509630.1_1_4:145573840-145606800:+|nuORF', 'nc|ENSG00000164161|Q96QV1-2|HHIP', 'ENSG00000164161|ENST00000296575|HHIP'] 13607 18392 DPGYQLQTL True PC9_epitope_Rep2 1033.50802524273 1033.5069299358602 76.076 2 -0.4863376481254807 0.13872601943360185 0.9442838007189999 ['ENST00000373122.8_1_6:41126504-41129123:-|nuORF', 'ENSG00000095970|ENST00000373113|TREM2'] 60202 21825 LGPLSLLSL True PC9_epitope_Rep2 911.56916894731 911.56806993586 89.424 2 -0.4863872439766064 0.13875462986031525 0.944311109325004 ['ENST00000368198.7_1_1:156776099-156776195:-|nuORF'] 35502 19478 GSPCWGLL True PC9_epitope_Rep1 831.3949100667899 831.39380993586 79.738 2 -0.4863938107318183 0.13875462986031525 0.9443147240032114 ['ENST00000483944.5_1_3:124810369-124811009:-|nuORF'] 130846 8333 VTAVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 41.697 2 -0.48648103101019646 0.13876893436088228 0.9443627095743486 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 16887 6296 EFKLKKMWKSP True PC9_epitope_Rep1 1420.7900778337598 1420.78843490379 29.03 3 -0.4865250875205934 0.13878323838628775 0.9443869303487488 ['nc|ENSG00000182054|P48735-2|IDH2', 'ENSG00000182054|ENST00000330062|IDH2'] 125962 11178 VLDIFFEVLNY True H1975_Epitope_Rep3 1370.7122043525399 1370.7111099358601 48.094 2 -0.4866676535398227 0.1388307590101312 0.9444652277636815 ['nc|ENSG00000110881|P78348-3|ASIC1', 'ENSG00000110881|ENST00000447966|ASIC1', 'nc|ENSG00000110881|P78348-1|ASIC1'] 13081 10638 DLQEELVEEV True H1975_Epitope_Rep1 1201.57141334493 1201.57030993586 45.876 2 -0.48672482190080013 0.1388616697945558 0.9444965902646519 ['HNRNPD|p.K260Rfs*109|1|0.24|ENSG00000138668|chr4:82356872-82356872|C/-|frameshift_variant'] 98579 16050 SFRRTIYL True PC9_epitope_Rep3 1054.5923640033798 1054.59126993586 66.888 2 -0.4867827804978031 0.13889257955224873 0.9445283662581884 ['ENSG00000163510|ENST00000410053|CWC22'] 89207 19025 QVTFNIFSI True PC9_epitope_Rep1 1067.56514619603 1067.56404993586 77.97 2 -0.4868353774109866 0.13890688057396244 0.9445571852849556 ['nc|ENSG00000293412|O75343|GUCY1B2'] 125298 10940 VIMWDPYT True H1975_Epitope_Rep2 1023.4735543103099 1023.47244993586 47.115 2 -0.4869447675960976 0.13895439598764406 0.9446170697744473 ['nc|ENSG00000176871|Q9NYS7-2|WSB2', 'ENSG00000176871|ENST00000315436|WSB2', 'nc|ENSG00000176871|Q9NYS7-3|WSB2'] 16428 6025 EEKQRAFEI True H1975_Epitope_Rep2 1148.5825871653199 1148.58094490379 28.153 3 -0.4870533889535043 0.13900190982313376 0.9446764630838043 ['nc|ENSG00000089177|Q96L93-5|KIF16B', 'nc|ENSG00000089177|Q96L93-6|KIF16B', 'nc|ENSG00000089177|Q96L93-4|KIF16B', 'ENSG00000089177|ENST00000354981|KIF16B', 'nc|ENSG00000089177|Q96L93-2|KIF16B'] 96407 12954 SAAAVCGMSTI True PC9_epitope_Rep5 1009.45725262317 1009.45614993586 54.837 2 -0.487150685747497 0.1390115912185725 0.9447296050592733 ['ENST00000330137.11_1_17:57232507-57232597:-|nuORF'] 117703 8031 TVTWTTWVP True NCI_RA007_Epitope_Rep1 1089.54949613189 1089.54838993586 35.235 2 -0.4871668600955365 0.1390115912185725 0.9447384338354514 ['ENSG00000183760|ENST00000331256|ACP7'] 81349 15975 PLAYGFQL True PC9_epitope_Rep2 907.4803539429099 907.47924993586 66.701 2 -0.4871900591310569 0.1390115912185725 0.9447510943607983 ['HDAC10|p.P572L|1|0.2|ENSG00000100429|chr22:50246028-50246028|G/A|missense_variant'] 102196 7769 SLRYNNKRAQ True NCI_RA007_Epitope_Rep1 1248.6687168311203 1248.6676099358601 34.209 2 -0.4872003295095274 0.13902358020591166 0.9447566982579417 ['ENST00000527786.6_1_11:128563962-128628025:+|nuORF'] 73181 13840 MRWRWWQRLLP True H1975_Epitope_Rep1 1626.8717908254598 1626.8706899358601 58.381 2 -0.48723356361154524 0.13902358020591166 0.9447748277755917 ['ENSG00000176410|ENST00000395176|DNAJC30'] 56271 10729 LDAAEWLP True PC9_epitope_Rep3 913.4545331178899 913.45342993586 46.224 2 -0.48726522828639823 0.13903787715248833 0.9447920951462514 ['ENST00000264258.7_1_2:101618763-101619227:+|nuORF'] 16788 13113 EEVEVQFSAGR True PC9_epitope_Rep1 1249.5938801250097 1249.59278993586 55.306 2 -0.48730159307475457 0.13904755579171094 0.944811918359535 ['ENSG00000156017|ENST00000376834|CARNMT1'] 106099 6611 STDDFKSKYES True H1975_Epitope_Rep3 1305.57247597409 1305.57136993586 30.381 2 -0.4873020461212317 0.13904755579171094 0.944812165276092 ['KRT40|p.A170S|1|0.29|ENSG00000204889|chr17:40983068-40983068|C/A|missense_variant'] 119251 19044 VALILLNSL True PC9_epitope_Rep5 954.6113681124601 954.61026993586 78.281 2 -0.48732760466597286 0.13904755579171094 0.944826093097936 ['nc|ENSG00000139292|O75473-3|LGR5', 'nc|ENSG00000139292|O75473-2|LGR5', 'ENSG00000139292|ENST00000266674|LGR5'] 8437 5774 ATNRPDAL True PC9_epitope_Rep1 856.4402800360799 856.43918993586 27.027 2 -0.48745212593249837 0.13907845579078457 0.9448938951785113 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 38022 6321 HAPDSVVP True PC9_epitope_Rep1 820.4079172786401 820.40682993586 29.126 2 -0.48753700463188665 0.13908813176595602 0.9449400603831775 ['ENST00000314686.9_1_3:40519448-40523394:+|nuORF', 'nc|ENSG00000177873|Q8N2I2-2|ZNF619'] 116218 15188 TTAPSGIVNV True PC9_epitope_Rep5 957.51311062317 957.51200993586 63.427 2 -0.487552711171277 0.13908813176595602 0.9449485985584282 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 119045 9214 VAGDKNTAIV True H1975_Epitope_Rep1 986.53965972418 986.53856993586 40.351 2 -0.4875639824619323 0.13908813176595602 0.9449547248296448 ['ENSG00000204361|ENST00000389586|NXPE2'] 75710 11497 NLKKAITANL True NCI_RA007_Epitope_Rep2 1084.6604435632 1084.65934993586 49.314 2 -0.48760869626642167 0.13913563233658205 0.9449790208807892 ['ENSG00000171502|ENST00000370571|COL24A1', 'nc|ENSG00000171502|Q17RW2-2|COL24A1', 'COL24A1|p.E886Kfs*50|1|0.17|ENSG00000171502|chr1:85909964-85909964|C/-|frameshift_variant'] 117220 14722 TVLNLHQHLK True PC9_epitope_Rep4 1201.6931406738101 1201.69204993586 64.562 2 -0.48773813518922937 0.13916652830815207 0.9450492893195773 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000557060.1_1_14:64540716-64565614:+|nuORF'] 61684 19672 LKVKDRKKKKK True NCI_RA007_Epitope_Rep3 1397.9558377192495 1397.95420490379 85.789 3 -0.4878436469057895 0.13921402599990038 0.9451064977950663 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 44002 20319 IIGDVDIAGL True PC9_epitope_Rep2 984.5491617787198 984.54806993586 83.582 2 -0.4878611610186085 0.13924260787276077 0.9451159878409671 ['ENSG00000131910|ENST00000254227|NR0B2'] 31504 7222 GEDDGSTLP True H1975_Epitope_Rep2 889.36650595913 889.3659549679301 32.713 1 -0.48786604979163156 0.13924260787276077 0.9451186365194431 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 86170 16019 QIEGRVVEI True PC9_epitope_Rep2 1041.5818588893299 1041.5807699358602 66.871 2 -0.48786851841786366 0.13924996264754222 0.9451199739401096 ['ENST00000503692.5_1_4:4422578-4426973:-|nuORF', 'ENSG00000168818|ENST00000306200|STX18'] 77509 10067 NTDFKQLYQTL True H1975_Epitope_Rep1 1369.68778050985 1369.6866899358602 43.663 2 -0.48787929011737374 0.13924996264754222 0.9451258092901775 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 69045 12983 LTQKWWGDMA True H1975_Epitope_Rep3 1234.5804789903398 1234.57938993586 55.173 2 -0.4878819383127012 0.13924996264754222 0.9451272437959316 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4', 'nc|ENSG00000130529|Q8TD43-3|TRPM4'] 61946 19658 LLDLAQRKL True PC9_epitope_Rep5 1068.66552894364 1068.6644299358602 80.671 2 -0.4878841608553011 0.13924996264754222 0.9451284476984988 ['ENSG00000159915|ENST00000683810|ZNF233', 'ZNF223|p.G23W|2|0.35|ENSG00000178386|chr19:44060506-44060506|G/T|missense_variant', 'ENST00000590614.5_1_19:44600547-44605100:+|nuORF', 'ENSG00000178386|ENST00000434772|ZNF223', 'ENSG00000124459|ENST00000269973|ZNF45', 'ENSG00000267680|ENST00000693561|ZNF224', 'ZNF225|p.D444Hfs*2|1|0.05|ENSG00000256294|chr19:44131942-44131943|-/CCAC|frameshift_variant', 'ENSG00000256294|ENST00000262894|ZNF225'] 58327 16321 LEMNNNKI True PC9_epitope_Rep2 974.48551597634 974.48440993586 68.023 2 -0.4879036380321528 0.13925962815405046 0.9451389968643169 ['nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L', 'ENSG00000157060|ENST00000367547|SHCBP1L'] 99790 11613 SIIYFTEHSP True NCI_RA007_Epitope_Rep2 1192.57643915572 1192.57534993586 49.764 2 -0.4879230321096531 0.13925962815405046 0.9451494988947368 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 8444 4117 ATPFQMFSP True H1975_Epitope_Rep2 1024.4688032830397 1024.46770993586 20.928 2 -0.48793549954691473 0.13925962815405046 0.9451562489804445 ['ENST00000301785.5_1_11:62480620-62480758:-|nuORF'] 98878 7057 SGVPEALDSDG True NCI_RA007_Epitope_Rep5 1045.45638359269 1045.45528993586 33.825 2 -0.48799207687497476 0.13927391643565015 0.9451868699265407 ['ENSG00000198746|ENST00000361720|GPATCH3'] 107244 23521 SVKKKKRRRKK True PC9_epitope_Rep1 1440.9841181557597 1440.98302993586 95.261 2 -0.48803826781012327 0.13930480395737194 0.9452118561848178 ['ENSG00000101577|ENST00000677752|LPIN2'] 128899 7022 VQFPGMAP True PC9_epitope_Rep5 845.4105601309299 845.40946993586 31.98 2 -0.4881206398290395 0.13939977425137773 0.9452563843831288 ['ENSG00000154262|ENST00000284425|ABCA6', 'nc|ENSG00000154262|Q8N139-2|ABCA6', 'nc|ENSG00000154262|Q8N139-3|ABCA6'] 95159 8936 RVFVVGVGMTK True NCI_RA007_Epitope_Rep4 1191.67979910879 1191.67816490379 41.206 3 -0.48813297393394084 0.13939977425137773 0.9452630486217537 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 84563 17012 QAVIAEQLA True PC9_epitope_Rep3 941.5181960036099 941.51708993586 70.593 2 -0.48814387742293636 0.13940943117499627 0.9452689391783503 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 122472 8910 VGEGAYGVVL True PC9_epitope_Rep1 962.5072969667399 962.50618993586 39.111 2 -0.4881898842769629 0.13940943117499627 0.9452937868684567 ['CDKL5|p.S744Vfs*40|1|0.06|ENSG00000008086|chrX:18613229-18613229|A/-|frameshift_variant', 'ENSG00000008086|ENST00000623535|CDKL5', 'nc|ENSG00000008086|O76039-1|CDKL5'] 79096 5697 PALPAQAK True NCI_RA007_Epitope_Rep5 794.46503823194 794.46394993586 28.6 2 -0.4882023263067655 0.13940943117499627 0.9453005046217141 ['nc|ENSG00000105122|Q86YV0-2|RASAL3', 'ENSG00000105122|ENST00000343625|RASAL3'] 57011 22456 LDRLRKKRHLL True NCI_RA007_Epitope_Rep3 1446.9259345732999 1446.92428490379 97.605 3 -0.4883269117303971 0.13944031337139823 0.9453677240117784 ['ENSG00000178605|ENST00000326153|GTPBP6'] 3208 11372 AGELGQTPQV True PC9_epitope_Rep5 998.5032742154598 998.50216993586 48.738 2 -0.48848344230937324 0.13949975934009395 0.9454520579829332 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 94608 9031 RRTPGGVF True NCI_RA007_Epitope_Rep4 888.4929843152798 888.49188993586 41.571 2 -0.4885336291683486 0.13949975934009395 0.9454790687417481 ['ENSG00000164902|ENST00000297540|PHAX'] 67580 13411 LSTYSCCI True PC9_epitope_Rep6 888.37212601688 888.37102993586 63.262 2 -0.48859051332842024 0.13949975934009395 0.9455096674152083 ['ENST00000376436.5_1_20:25655347-25655485:-|nuORF'] 17072 9837 EGIDKGQLP True NCI_RA007_Epitope_Rep5 955.4974605590298 955.49636993586 44.482 2 -0.48863205502935714 0.13953063798712076 0.9455320020836898 ['ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4'] 80683 12399 PGVLKVVS True PC9_epitope_Rep3 797.50108938749 797.49998993586 52.721 2 -0.4886737614011507 0.13954260298071497 0.9455544158758491 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 56535 14917 LDGFLKHV True H1975_Epitope_Rep1 927.5178020807899 927.51670993586 62.615 2 -0.488689386171038 0.13954260298071497 0.9455628104989002 ['ENSG00000219626|ENST00000615575|FAM228B'] 48348 17806 IYSTAFDYF True NCI_RA007_Epitope_Rep5 1125.5018772331298 1125.5007899358602 75.284 2 -0.48877456645938133 0.13962095061072757 0.9456085516152979 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'nc|ENSG00000290425|Q8N8J0|PI4KAP1', 'ENST00000450651.5_1_22:21841260-21846319:-|nuORF'] 58875 9265 LETAAPAPRPY True PC9_epitope_Rep3 1184.61897267404 1184.6178699358602 40.582 2 -0.4887769245370652 0.13962095061072757 0.9456098173278081 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 64105 16076 LPDPVLGA True PC9_epitope_Rep4 780.4381547777599 780.43704993586 69.771 2 -0.48880581123778716 0.13963291181253942 0.9456253200146438 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 58331 10405 LEMQMYGPP True H1975_Epitope_Rep1 1064.4670890308798 1064.46598993586 44.972 2 -0.4888187259718274 0.13963291181253942 0.9456322495429681 ['ENST00000480273.5_1_20:62318929-62319157:+|nuORF'] 41179 12469 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep5 1121.48115925233 1121.48006993586 52.96 2 -0.48882487904412797 0.13964255488624483 0.9456355507200936 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 34075 7365 GLWIWRYQEKK True NCI_RA007_Epitope_Rep1 1505.8143184356497 1505.81266490379 32.643 3 -0.48886367047962886 0.13964255488624483 0.9456563579934321 ['ENSG00000206190|ENST00000555815|ATP10A'] 99698 5572 SIHENFSQA True PC9_epitope_Rep6 1031.4672230599099 1031.4661299358602 29.474 2 -0.4888713464113858 0.13964255488624483 0.9456604743189689 ['ENSG00000125633|ENST00000376300|CCDC93'] 2017 7024 AEKAQQSYERL True H1975_Epitope_Rep2 1321.6626283911698 1321.66099490379 31.943 3 -0.48893954643795784 0.13967342603962696 0.9456970337147512 ['nc|ENSG00000137942|Q5T0N5-3|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-4|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-2|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-5|FNBP1L', 'ENSG00000137942|ENST00000271234|FNBP1L'] 128190 13679 VPLYLSKAP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 57.757 2 -0.4889848381667222 0.13970429616846158 0.945721299161984 ['nc|ENSG00000205307|Q8TEE9|SAP25', 'ENSG00000205307|ENST00000622764|SAP25'] 59341 21405 LFKLIVNSL True PC9_epitope_Rep2 1045.6535672776101 1045.6524699358602 87.805 2 -0.4891714427165043 0.13973552786580612 0.9458211595736256 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8'] 97550 20819 SEERTRWA True PC9_epitope_Rep3 1033.4941065140897 1033.49300993586 85.352 2 -0.48920744114487863 0.13973552786580612 0.9458404028178719 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 73723 22031 MYTMMELDY True H1975_Epitope_Rep3 1195.4599550451098 1195.4588499358601 92.124 2 -0.4892151425510849 0.13973552786580612 0.9458445187823776 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 65483 18809 LRLELHAGRV True NCI_RA007_Epitope_Rep5 1162.6934750269802 1162.6923699358601 79.193 2 -0.4892154921228049 0.13973552786580612 0.9458447056012432 ['NRXN1|p.D772H|1|0.12|ENSG00000179915|chr2:50531260-50531260|C/G|missense_variant'] 103661 9020 SPVDYGTSA True PC9_epitope_Rep5 895.39232678415 895.39177496793 39.642 1 -0.48922645140429344 0.13973552786580612 0.9458505621591009 ['ENSG00000149658|ENST00000370339|YTHDF1'] 9433 8300 AVVCREKP True PC9_epitope_Rep3 900.4851220535198 900.48402993586 36.899 2 -0.4892341860251919 0.13973552786580612 0.9458546951037581 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B'] 83039 14326 PSLDAIGDV True PC9_epitope_Rep3 885.4443623570099 885.44381496793 60.191 1 -0.48925408701807854 0.13973552786580612 0.9458653276310127 ['ENSG00000100373|ENST00000216211|UPK3A'] 87277 9675 QPPPGAPQ True PC9_epitope_Rep3 790.39735259494 790.3962499358599 42.163 2 -0.4892685916301822 0.13973552786580612 0.9458730757222663 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'nc|ENSG00000104973|Q71SY5-6|MED25', 'ENST00000594998.1_1_19:50338170-50339752:+|nuORF'] 48528 18293 KAKWLTPKKNV True PC9_epitope_Rep4 1311.8026911227898 1311.80104490379 78.433 3 -0.4893450496477507 0.13975711726060122 0.9459139000084278 ['ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF', 'nc|ENSG00000167785|Q96NG5-2|ZNF558'] 137077 13516 YAPVAMLQSA True PC9_epitope_Rep3 1049.5215671318902 1049.52046993586 57.039 2 -0.4893900717423402 0.13975711726060122 0.9459379250423698 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-2|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-1|CFAP47'] 118127 21109 TYIGQGYII True PC9_epitope_Rep5 1026.53859709502 1026.53807496793 86.261 1 -0.4894205135257822 0.13975711726060122 0.9459541636579405 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000489591.5_1_17:39969413-39975983:+|nuORF'] 47681 6667 IYAANRHVKK True NCI_RA007_Epitope_Rep1 1198.69347502698 1198.69183490379 29.944 3 -0.48943412843100986 0.13975711726060122 0.9459614247276252 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 65041 16682 LQKNSQLLY True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 69.413 2 -0.4894423478982565 0.13975711726060122 0.9459658078504176 ['ENST00000521104.1_1_6:56557688-56557817:-|nuORF'] 56947 11157 LDQPSFVPKSP True H1975_Epitope_Rep1 1213.6342883850098 1213.6331899358602 47.883 2 -0.4894879666471292 0.13978334079861976 0.9459901282110359 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 33065 17374 GILSVDLL True PC9_epitope_Rep1 828.49566965388 828.49456993586 71.637 2 -0.48953289142050566 0.13978334079861976 0.9460140681064674 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'DIO2|p.R209Efs*?|1|0.41|ENSG00000211448|chr14:80202886-80202886|G/-|frameshift_variant', 'ENST00000438257.8_2_14:80669457-80677836:-|nuORF'] 135745 23088 WLWWQPWWWWK True PC9_epitope_Rep2 1786.85612367798 1786.85502993586 94.298 2 -0.48955268077924113 0.13978334079861976 0.9460246103323954 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 76767 8583 NQWDGTQHGV True PC9_epitope_Rep5 1140.49483479008 1140.4942749679299 37.956 1 -0.4896562811748327 0.13979796639408165 0.9460797677488917 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 52926 14664 KPGKPRKRKKR True H1975_Epitope_Rep2 1377.9157042427698 1377.91405490379 61.566 3 -0.4896721292344346 0.13979796639408165 0.9460882005002555 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 75264 14352 NIHELWALTRI True H1975_Epitope_Rep3 1364.7564692063597 1364.75536993586 60.553 2 -0.48974473196263757 0.13979796639408165 0.9461268160436933 ['nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant'] 54699 21776 KYLVIGDLLF True PC9_epitope_Rep4 1179.69034670915 1179.68924993586 91.955 2 -0.48975129104068493 0.13979796639408165 0.9461303033298895 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 46224 2827 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 15.019 2 -0.4898115202216707 0.13979796639408165 0.9461623153714476 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 126336 23591 VLILILCLKV True PC9_epitope_Rep6 1125.75592417117 1125.75427490379 103.89 3 -0.48986235673721834 0.13979796639408165 0.946189320890181 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 39716 14795 HLTYIQKIFR True PC9_epitope_Rep2 1317.75574093037 1317.75409490379 62.172 3 -0.48987979118428354 0.13979796639408165 0.9461985794632949 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 61512 8948 LKEMPPPP True H1975_Epitope_Rep3 907.4837250711898 907.48262993586 39.415 2 -0.4899104278143573 0.13979796639408165 0.9462148453543697 ['ENST00000397463.2_1_2:133403546-133403624:-|nuORF'] 140475 19505 YRIREFRQTFR True PC9_epitope_Rep2 1570.84807817542 1570.84642490379 80.408 3 -0.48995889025352923 0.13981223460721867 0.9462405658587754 ['ENSG00000128271|ENST00000337539|ADORA2A'] 122427 9015 VGDVFRGG True PC9_epitope_Rep4 805.4082516318099 805.40714993586 42.246 2 -0.49004084712874024 0.13983845018327776 0.9462840361115392 ['NYAP1|p.V572Cfs*2|1|0.33|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 14656 12529 DVETLQQTI True PC9_epitope_Rep3 1045.52915461013 1045.52804993586 53.217 2 -0.4900524846671438 0.13983845018327776 0.9462902059874898 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 80596 12878 PGQLKILTG True PC9_epitope_Rep1 925.55966689277 925.55856993586 54.408 2 -0.49010660120114635 0.13983845018327776 0.9463188880990855 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 79175 7099 PAPAAQTPL True NCI_RA007_Epitope_Rep3 864.4705175352 864.46942993586 35.038 2 -0.49019359101109705 0.13986698290017083 0.9463649627864665 ['ENSG00000142959|ENST00000372207|BEST4'] 60339 7937 LGSLSSAREI True H1975_Epitope_Rep1 1031.56112344475 1031.56002993586 35.479 2 -0.49021574667180046 0.13986698290017083 0.9463766916853854 ['ENSG00000157214|ENST00000394621|STEAP2', 'STEAP2|p.A385Vfs*2|1|0.15|ENSG00000157214|chr7:90230005-90230005|C/-|frameshift_variant', 'nc|ENSG00000157214|Q8NFT2-3|STEAP2', 'nc|ENSG00000157214|Q8NFT2-2|STEAP2'] 11155 18448 DDIVGFSGDF True PC9_epitope_Rep4 1070.4556553167001 1070.45454993586 79.031 2 -0.4902673398296642 0.1398955137241894 0.9464039950037132 ['ENSG00000107742|ENST00000373109|SPOCK2'] 87842 14017 QRGPPIIL True PC9_epitope_Rep2 892.5494365622399 892.54832993586 59.195 2 -0.49028260152019476 0.1398955137241894 0.9464120690438442 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 59852 14221 LGFQKRWRK True PC9_epitope_Rep3 1217.71454482473 1217.7128849037902 59.786 3 -0.49038960058070646 0.13992404265552183 0.9464686437124666 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 44870 6008 INISEGNC[Carbamidomethyl]PER True NCI_RA007_Epitope_Rep2 1287.58774947818 1287.5866499358601 27.979 2 -0.49040967855873263 0.13992404265552183 0.9464792535012447 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 86130 16136 QIAQVDFL True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49562993586 71.17 2 -0.49042001580098954 0.1399267034807555 0.9464847152347905 ['ENST00000317089.9_1_16:46990891-46990996:-|nuORF'] 91098 19012 RFPRKSRLRP True PC9_epitope_Rep2 1311.8000057841898 1311.79837490379 78.494 3 -0.4904234127267033 0.1399267034807555 0.9464865099037831 ['ENST00000419165.5_1_X:103173538-103173796:+|nuORF'] 459 6612 AALQVHQPP True PC9_epitope_Rep3 959.5188647099499 959.51776993586 30.458 2 -0.4904646015595523 0.1399267034807555 0.9465082663820142 ['ENST00000596769.1_1_19:53510963-53514048:+|nuORF'] 9463 6420 AVVGVVAGGGR True PC9_epitope_Rep2 940.5454138109598 940.54430993586 30.103 2 -0.4904981919980295 0.1399267034807555 0.9465260031867399 ['ENSG00000161016|ENST00000528957|RPL8'] 17738 4772 EHRGPVQVT True PC9_epitope_Rep4 1021.53049202281 1021.52938993586 24.927 2 -0.4905018418874914 0.1399267034807555 0.9465279301131377 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 126538 19899 VLLMFGLLLHL True NCI_RA007_Epitope_Rep1 1267.7726368644699 1267.77100490379 81.608 3 -0.4905147227166763 0.1399267034807555 0.9465347299154429 ['nc|ENSG00000204544|Q5SSG8-3|MUC21', 'ENSG00000204544|ENST00000376296|MUC21', 'nc|ENSG00000204544|Q5SSG8-2|MUC21'] 108383 19028 SYLERHGLINF True PC9_epitope_Rep5 1347.6935345966297 1347.69187490379 78.219 3 -0.49065557093862794 0.1399837498134545 0.9466090315423343 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 28608 9367 FSHCCLNP True H1975_Epitope_Rep2 919.36804369595 919.36694993586 40.992 2 -0.49066720891219334 0.1399837498134545 0.9466151666492142 ['ENSG00000168329|ENST00000399220|CX3CR1', 'nc|ENSG00000168329|P49238-3|CX3CR1', 'nc|ENSG00000168329|P49238-4|CX3CR1', 'nc|ENSG00000168329|P49238-2|CX3CR1'] 10910 11255 DAAIANAFRR True H1975_Epitope_Rep1 1103.5835902248298 1103.5824899358602 48.269 2 -0.4906685681474443 0.1399837498134545 0.9466158831451207 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 90489 9152 RELEDLKY True H1975_Epitope_Rep2 1064.5502244078798 1064.54912993586 40.154 2 -0.49069005178142316 0.1399837498134545 0.9466272066721612 ['nc|ENSG00000198003|A5D8V7-2|ODAD3', 'ENSG00000198003|ENST00000356392|ODAD3'] 91526 6935 RIDEFESM-[Oxidation] True NCI_RA007_Epitope_Rep2 1041.44371111445 1041.4426099358602 31.595 2 -0.49071255467955865 0.1399980102142336 0.9466390650597994 ['ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 48433 17321 IYYCIVVLL True PC9_epitope_Rep5 1097.61949026801 1097.61838993586 71.626 2 -0.4907373919648145 0.14002652959708176 0.9466521507919642 ['SLC33A1|p.Y411C|1|0.06|ENSG00000169359|chr3:155833502-155833502|T/C|missense_variant'] 39317 16611 HISVGPFPIL True NCI_RA007_Epitope_Rep4 1078.6175161220601 1078.61640993586 72.013 2 -0.4907480208297921 0.14002652959708176 0.9466577497985396 ['SLC26A3|p.D701*|1|0.05|ENSG00000091138|chr7:107767870-107767871|-/A|frameshift_variant', 'ENSG00000091138|ENST00000340010|SLC26A3'] 117317 12644 TVNIVVTDV True PC9_epitope_Rep1 958.53351171458 958.53240993586 53.505 2 -0.4907687361982877 0.14004078857919783 0.9466686605613648 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15'] 85305 8114 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.5723899358602 36.16 2 -0.4908527094751625 0.14006001624749242 0.9467128682838518 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 70555 16769 LWAFRKWKWYQ True NCI_RA007_Epitope_Rep4 1610.8510382975398 1610.8499499358602 72.686 2 -0.490854385144986 0.14006001624749242 0.9467137500993942 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A', 'KIF1A-C2orf54|2|fusion', 'KIF1A-C2orf54|1|fusion'] 118612 6390 TYSGQWMYERV True H1975_Epitope_Rep1 1418.62888573474 1418.6277899358602 29.639 2 -0.49086999019488947 0.14006001624749242 0.9467219615649101 ['ENSG00000226887|ENST00000443173|ERVMER34-1'] 68924 13601 LTPARLRWD True PC9_epitope_Rep1 1126.6247267608198 1126.6236299358602 57.172 2 -0.49088282350618007 0.14006001624749242 0.9467287136613264 ['ENSG00000189409|ENST00000356026|MMP23B', 'nc|ENSG00000189409|O75900-3|MMP23B', 'nc|ENSG00000189409|O75900-2|MMP23B'] 123909 8604 VGRSFEPIIK True NCI_RA007_Epitope_Rep2 1144.6604435631998 1144.65880490379 38.113 3 -0.4908999551772336 0.14006001624749242 0.946737726073481 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 41825 5135 IAVETGKNSES True NCI_RA007_Epitope_Rep5 1133.5564319871298 1133.55532993586 26.448 2 -0.49091848476538635 0.14006001624749242 0.9467474723192724 ['ENST00000496445.5_1_10:114207101-114298148:+|nuORF'] 60242 9733 LGQRVQCSP True H1975_Epitope_Rep3 986.4967493663798 986.49564993586 42.459 2 -0.49094575711125815 0.14007427301966247 0.9467618141482999 ['ENSG00000215182|ENST00000621226|MUC5AC'] 119971 6049 VDPGHPPAS True NCI_RA007_Epitope_Rep5 875.41373093507 875.41262993586 29.948 2 -0.4910306699998467 0.14009117281392458 0.9468064451204483 ['ENST00000487659.1_1_1:1342042-1342597:-|nuORF'] 92336 15857 RLNAKEIV True PC9_epitope_Rep1 941.56581490237 941.56470993586 65.806 2 -0.4910666603270893 0.14009117281392458 0.9468253516653198 ['SUCLG2|p.D257Afs*7|1|0.1|ENSG00000172340|chr3:67498283-67498284|-/G|frameshift_variant', 'ENST00000307241.5_1_12:94942028-94943309:+|nuORF', 'ENSG00000172340|ENST00000307227|SUCLG2', 'nc|ENSG00000172340|Q96I99-2|SUCLG2'] 98282 7862 SEVKNVDLAS True NCI_RA007_Epitope_Rep3 1060.540053647 1060.53894993586 38.044 2 -0.49108502537706017 0.14009117281392458 0.9468349968875326 ['ENSG00000072415|ENST00000261681|PALS1'] 11234 5571 DEEEDHWKL True H1975_Epitope_Rep3 1199.50948179471 1199.5078349037901 26.47 3 -0.49109641704374773 0.14009117281392458 0.9468409789263679 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 47521 7613 IVSDQKPSVSK True H1975_Epitope_Rep1 1186.65575210558 1186.65464993586 34.272 2 -0.4911221168132193 0.14009117281392458 0.9468544722422793 ['ENSG00000114857|ENST00000232978|NKTR', 'ENST00000508351.5_1_3:42675051-42676859:+|nuORF', 'ENST00000464315.1_1_3:42675165-42676228:+|nuORF'] 881 12276 ADIGVNSL True NCI_RA007_Epitope_Rep1 787.40758292547 787.40648993586 51.72 2 -0.4911505113905391 0.14009117281392458 0.9468693768015961 ['ENSG00000251664|ENST00000398631|PCDHA12', 'nc|ENSG00000251664|Q9UN75-2|PCDHA12'] 119099 3836 VAGRWQRP True NCI_RA007_Epitope_Rep4 968.5304324531598 968.52932993586 20.951 2 -0.49115960482144266 0.14009117281392458 0.94687414921693 ['ENST00000464954.1_1_1:167691224-167691416:+|nuORF'] 100201 12287 SIVGLGSVAV True PC9_epitope_Rep4 900.5280324113199 900.52692993586 55.078 2 -0.49125527273221953 0.14015283372287698 0.9469243339970101 ['ENST00000378700.7_2_6:19837725-19837965:+|nuORF'] 21752 8666 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep5 1133.4811592523297 1133.48006993586 38.277 2 -0.49127229855483434 0.14015283372287698 0.9469332607516728 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 69380 10483 LTVWAASL True PC9_epitope_Rep1 859.4803539429099 859.47924993586 45.211 2 -0.49127903847236004 0.1401624399138074 0.946936794158437 ['ENSG00000174948|ENST00000389740|GPR149', 'GPR149|p.P223Rfs*82|1|0.32|ENSG00000174948|chr3:154428950-154428950|C/-|frameshift_variant', 'GPR149|p.H369Tfs*44|1|0.11|ENSG00000174948|chr3:154427585-154427585|G/-|frameshift_variant'] 85307 8045 QERFTQDTQP True H1975_Epitope_Rep3 1248.5734790335998 1248.5723899358602 35.918 2 -0.4913300432102217 0.1401624399138074 0.9469635264841088 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 126408 5252 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 26.899 3 -0.4913304757410559 0.1401624399138074 0.9469637531273571 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 101512 18660 SLLEEFFRQ True PC9_epitope_Rep4 1167.59242357303 1167.5913299358601 79.853 2 -0.49142453671013697 0.140190943446264 0.947013019496071 ['nc|ENSG00000154678|Q14123-2|PDE1C', 'ENSG00000154678|ENST00000396191|PDE1C', 'nc|ENSG00000154678|Q14123-3|PDE1C'] 58529 7754 LEQHKGFMMEP True H1975_Epitope_Rep1 1345.61587852289 1345.61422490379 34.785 3 -0.49142531193636196 0.140190943446264 0.9470134253635597 ['ENSG00000105696|ENST00000262817|TMEM59L', 'ENST00000598660.1_1_19:18729161-18731343:+|nuORF'] 65100 16411 LQLWQERERRQ True NCI_RA007_Epitope_Rep2 1540.8222573504 1540.82116993586 68.564 2 -0.4914650940335931 0.1402217691810452 0.9470342493682782 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF', 'ENST00000498539.1_1_7:100174858-100175272:-|nuORF'] 5389 10212 ALSQRTTVP True PC9_epitope_Rep2 971.5399940773499 971.53888993586 44.616 2 -0.4915791526646813 0.14026219401030876 0.9470939122513987 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 119565 11777 VATDHVAFLL True PC9_epitope_Rep4 1084.59169529704 1084.5905899358602 53.067 2 -0.4916185839492707 0.14026219401030876 0.9471145241117727 ['ENSG00000149635|ENST00000279028|OCSTAMP'] 65660 19733 LSANITGF True H1975_Epitope_Rep3 821.42831837005 821.4277649679301 82.632 1 -0.49163779947198155 0.14026219401030876 0.9471245659663612 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 58698 10026 LERQRQLEWER True NCI_RA007_Epitope_Rep1 1541.8062729330898 1541.8046249037898 43.006 3 -0.491682754118186 0.14026219401030876 0.9471480520710606 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'ITSN1|p.E686Hfs*57|1|0.07|ENSG00000205726|chr21:33797480-33797481|-/ACATT|frameshift_variant', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'ITSN1|p.G1004Ffs*20|1|0.1|ENSG00000205726|chr21:33819308-33819309|-/TCGTT|frameshift_variant', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1'] 13859 5920 DQQDVFCFR True H1975_Epitope_Rep3 1156.4971432892 1156.4960499358601 27.78 2 -0.4917934728051185 0.14030958931353377 0.9472058554679698 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'ENST00000557417.5_3_12:56748997-56753873:-|nuORF', 'ENST00000556140.5_1_12:56748997-56753873:-|nuORF'] 71292 15809 LYQDHMQYI True PC9_epitope_Rep1 1209.54884450889 1209.54774993586 65.622 2 -0.4918409051991937 0.14032383698768625 0.9472306011069348 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 48839 6900 KDWKTAYSYFY True H1975_Epitope_Rep1 1470.68196685342 1470.68032490379 31.581 3 -0.4920151948156643 0.14037122969837587 0.9473214380153707 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 70170 16774 LVPTSISSSL True PC9_epitope_Rep2 1002.55972646242 1002.55862993586 69.769 2 -0.4920484567381489 0.14038547587875574 0.9473387574223785 ['ENST00000557385.1_1_X:119387337-119387481:+|nuORF'] 56920 12892 LDQFLDKMDDP True H1975_Epitope_Rep2 1335.6016679273898 1335.6005699358602 54.702 2 -0.49213379875935626 0.1404305387534594 0.947383171141462 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1', 'ENST00000529231.1_8:145488904-145515052:-|nuORF'] 44830 17107 INDVKELIEEK True H1975_Epitope_Rep3 1328.71874628496 1328.7176499358602 71.424 2 -0.4921575767075752 0.1404305387534594 0.9473955396019698 ['ENSG00000109576|ENST00000337664|AADAT', 'nc|ENSG00000109576|Q8N5Z0-2|AADAT'] 96829 11837 SASDVFEHL True NCI_RA007_Epitope_Rep5 1003.46107505031 1003.45996993586 52.188 2 -0.4922303053539298 0.14046135489858147 0.9474333541119493 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF', 'ENST00000484926.1_1_2:202050494-202050848:+|nuORF'] 98289 5901 SEVNTAAK True PC9_epitope_Rep1 818.4133965819 818.41228993586 27.514 2 -0.49227272451407406 0.14050874140359598 0.947455398110509 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'nc|ENSG00000176225|Q86VV8-4|RTTN'] 67555 8189 LSTRCREMPQN True NCI_RA007_Epitope_Rep5 1333.62308916165 1333.62198993586 38.181 2 -0.49237425740125346 0.1405537972061577 0.9475081276810295 ['MYT1L|p.G1020Afs*19|1|0.17|ENSG00000186487|chr2:1839170-1839170|C/-|frameshift_variant', 'MYT1L|p.F1022Sfs*17|1|0.61|ENSG00000186487|chr2:1839164-1839164|A/-|frameshift_variant', 'nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L'] 12362 5753 DIRVLRIGP True NCI_RA007_Epitope_Rep4 1037.6345631685297 1037.6334699358601 28.747 2 -0.49240051622573777 0.1405537972061577 0.9475217569791783 ['nc|ENSG00000063015|Q53EL9-2|SEZ6', 'nc|ENSG00000063015|Q53EL9-3|SEZ6', 'ENSG00000063015|ENST00000317338|SEZ6'] 14120 10430 DSDDGPSLP True H1975_Epitope_Rep3 901.36650595913 901.3659549679301 45.178 1 -0.4924526102411232 0.14056338028169013 0.9475487861814614 ['ENSG00000157916|ENST00000605895|RER1'] 139705 20442 YNLKRTPRRIK True NCI_RA007_Epitope_Rep5 1443.87865002771 1443.87700490379 85.568 3 -0.4924830811230482 0.14056338028169013 0.9475645902677076 ['ENSG00000150594|ENST00000280155|ADRA2A'] 138750 7755 YISKPENL True PC9_epitope_Rep4 962.50729696674 962.50618993586 37.222 2 -0.4924841741236924 0.14056338028169013 0.9475651570851782 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000102547|ENST00000409308|CAB39L'] 74322 10115 NELQVRWQEYR True H1975_Epitope_Rep3 1519.75317473107 1519.7520699358602 43.948 2 -0.49256860712769596 0.14056597521373185 0.9476089262521232 ['PLEC|p.L279V|1|0.19|ENSG00000178209|chr8:143936990-143936990|G/C|missense_variant'] 33960 10980 GLSLQAQLL True H1975_Epitope_Rep1 941.5545815123298 941.55348993586 47.199 2 -0.4925752427425091 0.14056597521373185 0.9476123646776157 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 113684 9128 TLWWERTQEDK True NCI_RA007_Epitope_Rep2 1490.7153922400196 1490.71428993586 40.111 2 -0.49257982403922607 0.14056597521373185 0.9476147384823927 ['ABCA5|p.R1639K|1|0.09|ENSG00000154265|chr17:69247550-69247550|C/T|missense_variant'] 45282 14752 IPVTQEVL True NCI_RA007_Epitope_Rep3 897.5171333744499 897.51602993586 65.44 2 -0.4925945194789811 0.14056597521373185 0.9476223522844138 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'AREL1|p.R286Pfs*8|1|0.33|ENSG00000119682|chr14:74675922-74675922|C/-|frameshift_variant'] 77025 5086 NRIKDQYKV True PC9_epitope_Rep1 1162.6458561282202 1162.64422490379 24.418 3 -0.4925958264166279 0.14056597521373185 0.9476230293685831 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP'] 39406 5394 HKRPQLSP True PC9_epitope_Rep6 961.5457481641299 961.54464993586 28.632 2 -0.49260305827939266 0.14056597521373185 0.9476267758304735 ['ENST00000465160.2_1_9:140286885-140287641:-|nuORF'] 29091 11528 FTIQCERE True PC9_epitope_Rep3 1024.4647805317597 1024.4636899358602 49.349 2 -0.49262538501268244 0.14056624090916622 0.9476383406456659 ['ENST00000489914.1_1_2:74732213-74732711:-|nuORF'] 71761 4917 MEFVRMKGP True H1975_Epitope_Rep2 1093.5412570306498 1093.5401499358602 23.995 2 -0.4926395842089881 0.14056624090916622 0.9476456943482652 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930'] 126399 4874 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 25.197 3 -0.49265254535092184 0.14056624090916622 0.9476524060494506 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 13832 10541 DQLKQEFEFWY True H1975_Epitope_Rep3 1531.6983451935498 1531.69724993586 45.612 2 -0.49275125303124484 0.14056624090916622 0.9477034944859049 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000514104.5_1_5:145522433-145523105:-|nuORF', 'ENST00000512412.1_1_5:145519224-145523084:-|nuORF'] 132873 12743 VVLPKPIA True PC9_epitope_Rep2 835.5531249603499 835.55202993586 54.32 2 -0.4927708228154741 0.14056624090916622 0.9477136179029684 ['ENSG00000152465|ENST00000378165|NMT2'] 93568 5465 RQLREYQEL True NCI_RA007_Epitope_Rep3 1233.6465844042098 1233.64492490379 28.504 3 -0.49277839279802516 0.14056624090916622 0.9477175333654784 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9NSB2', 'CON__H-INV:HIT000292931'] 15525 4134 EANSKTSCP True H1975_Epitope_Rep3 935.40184592203 935.40074993586 21.024 2 -0.4928219359180846 0.14056624090916622 0.9477400502404087 ['ENSG00000134594|ENST00000257017|RAB33A'] 44263 5306 ILAGAGLR True NCI_RA007_Epitope_Rep5 769.48102264925 769.47992993586 27.104 2 -0.4928321439388591 0.14057349213974524 0.9477453277052862 ['ENST00000446750.1_3_X:53707646-53710946:-|nuORF', 'ENST00000342160.7_2_X:53707120-53710946:-|nuORF'] 109890 19734 TEFKGIPIS True PC9_epitope_Rep5 990.5385970950198 990.53750993586 80.953 2 -0.4928329993796461 0.14057349213974524 0.9477457699393559 ['ENST00000531788.5_1_6:135639727-135754270:-|nuORF', 'nc|ENSG00000135541|Q8N157-2|AHI1', 'ENSG00000135541|ENST00000265602|AHI1'] 64018 13365 LPAARPWAGRR True H1975_Epitope_Rep1 1249.7156074538898 1249.7145099358602 56.518 2 -0.49284108263444976 0.14057349213974524 0.947749948542171 ['ENST00000264254.10_1_2:101179371-101179506:+|nuORF'] 101644 14427 SLLSHLWLA True PC9_epitope_Rep1 1038.58621599378 1038.5851099358601 60.317 2 -0.4928564381020985 0.14057349213974524 0.9477578856483752 ['ENSG00000171451|ENST00000310045|DSEL'] 98597 8825 SFSQSRYSV True PC9_epitope_Rep3 1059.4985231881901 1059.49742993586 38.896 2 -0.4929110160892124 0.14058772859793267 0.9477860876787629 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 19882 8809 ELTKDLVV True NCI_RA007_Epitope_Rep4 915.5276980581499 915.52660993586 40.694 2 -0.4929437544005378 0.14060921272754376 0.9478029978880214 ['ENSG00000158158|ENST00000377075|CNNM4'] 130628 9348 VSSSDQQSL True PC9_epitope_Rep6 949.43525422529 949.43414993586 46.143 2 -0.49296295230601017 0.14060921272754376 0.947812911806767 ['nc|ENSG00000142687|Q8IZA0-2|KIAA0319L', 'ENSG00000142687|ENST00000325722|KIAA0319L'] 69197 12097 LTSINDHSI True PC9_epitope_Rep1 998.5032742154601 998.50216993586 51.391 2 -0.49298385691226904 0.14060921272754376 0.9478237051343902 ['RRAGD|p.Y222N|1|0.19|ENSG00000025039|chr6:89379319-89379319|A/T|missense_variant'] 108995 6932 TAGSFSLSVR True NCI_RA007_Epitope_Rep3 1023.53490869691 1023.53380993586 34.373 2 -0.4929981531322403 0.14060921272754376 0.9478310852982472 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 97499 9307 SEEMVPSSPSP True H1975_Epitope_Rep2 1145.4910548492498 1145.48994993586 40.757 2 -0.49300415910948275 0.14060921272754376 0.9478341854925131 ['ENST00000548284.1_1_12:53609348-53613842:-|nuORF', 'ENST00000550265.5_1_12:53608380-53613977:-|nuORF', 'nc|ENSG00000172819|P13631-2|RARG', 'ENSG00000172819|ENST00000425354|RARG'] 35957 7628 GTTNKMKSP True NCI_RA007_Epitope_Rep4 962.4855159763399 962.48440993586 35.994 2 -0.4931259893510957 0.14061878892275076 0.9478970363642726 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 137719 5858 YELRCLLNK True NCI_RA007_Epitope_Rep5 1150.6168644990598 1150.61576993586 29.217 2 -0.493165845177541 0.14061878892275076 0.9479175826365891 ['ENSG00000100139|ENST00000215957|MICALL1'] 12619 13287 DLALALMITYK True H1975_Epitope_Rep3 1250.69444611342 1250.6933499358602 56.366 2 -0.49320745215843836 0.14061878892275076 0.94793902382027 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8'] 42785 5890 IENIQRVAA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 29.344 2 -0.49323662838090393 0.14064958510691158 0.9479540543316811 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 109708 12574 TEDLEFHGVM True H1975_Epitope_Rep2 1176.512124647 1176.51102993586 53.461 2 -0.49325655592740403 0.14067805031550704 0.9479643180068292 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 92016 24375 RKRRFQLRRCM True PC9_epitope_Rep4 1548.8718079087996 1548.87070993586 102.24 2 -0.49329742005173915 0.14067805031550704 0.9479853593220107 ['ENSG00000136206|ENST00000693451|SPDYE1', 'nc|ENSG00000136206|Q8NFV5|SPDYE1'] 122801 18637 VGGQLWLVL True PC9_epitope_Rep3 983.5804023373499 983.57930993586 76.908 2 -0.4933454349697574 0.1406922822126532 0.948010072796593 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171055868-171092621:+|nuORF', 'MYO3B|p.F196Vfs*6|1|0.08|ENSG00000071909|chr2:170217372-170217373|-/C|frameshift_variant'] 65870 15292 LSDMDLINVSK True H1975_Epitope_Rep3 1233.6274887524098 1233.62638993586 64.229 2 -0.4933556746581386 0.14069952305246422 0.9480153418296874 ['nc|ENSG00000112029|Q9UKT4-2|FBXO5', 'ENSG00000112029|ENST00000229758|FBXO5'] 127966 11067 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 47.569 2 -0.4934367185634461 0.14069952305246422 0.9480570275041472 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 69436 10389 LTYLNKHRR True H1975_Epitope_Rep1 1199.68872399971 1199.68762993586 44.91 2 -0.4934617411246067 0.14069952305246422 0.9480698919692647 ['nc|ENSG00000069188|Q58EX2-3|SDK2'] 49591 18807 KFWYEMPNNLL True H1975_Epitope_Rep3 1453.7064077794496 1453.7053099358602 78.88 2 -0.49346580120002465 0.14069952305246422 0.9480719790414031 ['ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 117627 14562 TVTGVSLSIV True PC9_epitope_Rep2 974.56481184286 974.56370993586 61.283 2 -0.49350860826868376 0.14074687422373106 0.9480939792916896 ['ENST00000396267.1_2_17:8272399-8272447:-|nuORF'] 139547 6691 YLTKHKRIHTG True H1975_Epitope_Rep1 1352.7677025963999 1352.76604490379 30.785 3 -0.4935592515376064 0.14076110356705196 0.9481199959772892 ['ENST00000575471.2_1_16:31925765-31927799:+|nuORF', 'ENSG00000185947|ENST00000300870|ZNF267', 'ZNF195|p.D424Y|1|0.2|ENSG00000005801|chr11:3359738-3359738|C/A|missense_variant', 'nc|ENSG00000197124|O95780-2|ZNF682', 'nc|ENSG00000197124|O95780-3|ZNF682', 'ENSG00000197124|ENST00000397165|ZNF682'] 20944 15515 EQNYQRWREER True NCI_RA007_Epitope_Rep1 1592.74440095252 1592.74330993586 64.435 2 -0.4935786927336465 0.14076600818002682 0.9481299802586066 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 79885 4146 PELSPSPQSP True H1975_Epitope_Rep3 1037.50293986229 1037.50184993586 21.068 2 -0.49358175615298294 0.14076600818002682 0.9481315533591453 ['ENSG00000129749|ENST00000250699|CHRNA10'] 89271 18124 QVVSFLHTV True PC9_epitope_Rep1 1028.5654805492 1028.5643899358602 74.505 2 -0.49361005691550996 0.14076600818002682 0.9481460840789954 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.L1613F|1|0.33|ENSG00000085224|chrX:77633683-77633683|C/A|missense_variant'] 3246 10455 AGEVHTGTTI True PC9_epitope_Rep1 984.4876241513199 984.48652993586 45.102 2 -0.4936112704152637 0.14076600818002682 0.9481467070548955 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 124211 11029 VGTEAHLSL True PC9_epitope_Rep4 925.48689587533 925.48578993586 50.199 2 -0.4936139395364461 0.14076600818002682 0.9481480772811663 ['ENSG00000115318|ENST00000264094|LOXL3'] 99388 6717 SHVALAVAS True PC9_epitope_Rep1 853.46576650793 853.46466993586 30.64 2 -0.4937171485444892 0.14081335276195522 0.9482010357703561 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 60541 16176 LHDPDLDF True PC9_epitope_Rep5 970.43961132974 970.43850993586 67.211 2 -0.4937786442985414 0.14082757935522328 0.948232567125569 ['ENSG00000197077|ENST00000358431|KIAA1671'] 141471 13280 YTHSVIHTHSI True PC9_epitope_Rep5 1293.64658440421 1293.64492490379 56.091 3 -0.4938703893024215 0.14086559157588 0.948279576213513 ['PEG3|p.G1199Vfs*8|1|0.27|ENSG00000198300|chr19:56814846-56814846|C/-|frameshift_variant', 'nc|ENSG00000198300|Q9GZU2-2|PEG3', 'nc|ENSG00000198300|Q9GZU2-4|PEG3', 'ENSG00000198300|ENST00000326441|PEG3'] 107019 14782 SVFIPRRFI True H1975_Epitope_Rep3 1133.67094867725 1133.6698499358602 62.238 2 -0.49389668595557035 0.14086559157588 0.948293043194931 ['ENST00000506590.1_1_4:78527019-78531849:+|nuORF', 'ENSG00000156234|ENST00000682537|CXCL13'] 20501 9917 EPLVLDGK True PC9_epitope_Rep2 869.4858332461699 869.48472993586 43.478 2 -0.4939265110794988 0.14086559157588 0.9483083133302602 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2'] 112656 5077 TLFNRTLQG True PC9_epitope_Rep4 1048.5665431783598 1048.5654499358602 26.179 2 -0.4939307418926036 0.14086559157588 0.9483104791296861 ['ENST00000422239.5_1_7:30028219-30028396:+|nuORF'] 91140 23825 RFWKLILLTWL True PC9_epitope_Rep5 1487.9016768880697 1487.90002490379 96.624 3 -0.4939736396158907 0.14086559157588 0.9483324343088407 ['ENST00000465952.5_1_13:31205167-31205455:+|nuORF'] 66137 8085 LSELSYAP True PC9_epitope_Rep1 878.4385487005799 878.43744993586 35.923 2 -0.49398992934633434 0.14087281878083507 0.9483407692307709 ['ENSG00000090857|ENST00000288050|PDPR', 'ENST00000566802.5_1_16:74366359-74378726:-|nuORF'] 5948 6174 APGVPRSGL True PC9_epitope_Rep6 852.48175092524 852.48064993586 32.191 2 -0.4939911846809097 0.14087281878083507 0.948341411493929 ['ENST00000401869.5_1_2:242447465-242447588:-|nuORF'] 25222 8028 FDESPPPP True PC9_epitope_Rep2 884.3915985081599 884.39050993586 36.241 2 -0.4940172796557932 0.14087281878083507 0.9483547607547959 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 38441 4447 HENNNGQAAF True NCI_RA007_Epitope_Rep4 1100.4635346618 1100.4624299358602 23.478 2 -0.49402588984093315 0.14087281878083507 0.9483591647348321 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 101031 20891 SLGASIATGIL True PC9_epitope_Rep2 1001.57571087973 1001.57517496793 85.8 1 -0.4940664717612265 0.14088704203433605 0.9483799172049987 ['ENSG00000173214|ENST00000671876|MFSD4B'] 74423 9245 NETFQKLWFSP True NCI_RA007_Epitope_Rep2 1395.6823012065897 1395.6812099358601 40.573 2 -0.4941090059465998 0.14091782001191974 0.9484016599174984 ['NIPBL|p.T1916S|1|0.33|ENSG00000164190|chr5:37026266-37026266|C/G|missense_variant'] 37985 5461 HAIESLLQ True NCI_RA007_Epitope_Rep1 909.49198125577 909.49088993586 25.313 2 -0.49416843852738973 0.14094859697044945 0.9484320269226355 ['SEC22A|p.S256Ffs*16|1|0.09|ENSG00000121542|chr3:123271564-123271565|TC/-|frameshift_variant', 'ENSG00000121542|ENST00000492595|SEC22A'] 109041 7875 TAIQGISEKEK True NCI_RA007_Epitope_Rep4 1202.65066672514 1202.6495699358602 37.011 2 -0.4942356299624061 0.1409959275568652 0.9484663388529565 ['ENSG00000164741|ENST00000276297|DLC1', 'nc|ENSG00000164741|Q96QB1-5|DLC1', 'nc|ENSG00000164741|Q96QB1-3|DLC1', 'DLC1|p.S557Ffs*63|1|0.27|ENSG00000164741|chr8:13100667-13100668|-/A|frameshift_variant', 'DLC1|p.S828Lfs*6|1|0.26|ENSG00000164741|chr8:13099855-13099856|-/G|frameshift_variant', 'DLC1|p.S830Rfs*7|1|0.17|ENSG00000164741|chr8:13099850-13099850|G/-|frameshift_variant'] 27759 8310 FPTGSQPA True NCI_RA007_Epitope_Rep3 803.38136817763 803.38026993586 39.805 2 -0.4942906753084569 0.1410196987253766 0.9484944328968641 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 78762 5920 PAAHRFPDGP True NCI_RA007_Epitope_Rep4 1063.51992733911 1063.5188299358601 29.393 2 -0.49432094516471425 0.1410196987253766 0.9485098761291223 ['ENST00000390672.2_3_19:5783973-5784096:-|nuORF'] 94193 23998 RRPLLRALF True PC9_epitope_Rep3 1140.7243812324398 1140.72274490379 97.596 3 -0.4943384891517398 0.1410196987253766 0.9485188248966376 ['ENST00000527418.5_1_1:155023541-155024009:+|nuORF'] 31554 4678 GEEALKTPP True H1975_Epitope_Rep3 940.48656152216 940.48546993586 23.118 2 -0.4943690421742576 0.1410196987253766 0.9485344059081435 ['nc|ENSG00000170011|Q8NFW9-5|MYRIP', 'nc|ENSG00000170011|Q8NFW9-4|MYRIP', 'nc|ENSG00000170011|Q8NFW9-3|MYRIP', 'nc|ENSG00000170011|Q8NFW9-6|MYRIP', 'nc|ENSG00000170011|Q8NFW9-2|MYRIP', 'ENSG00000170011|ENST00000302541|MYRIP'] 119162 22703 VAISFLVLAL True PC9_epitope_Rep5 1044.65831830488 1044.6572299358602 92.333 2 -0.49441161221286295 0.14102691429138942 0.9485561080916692 ['SLC17A6|p.V420L|1|0.12|ENSG00000091664|chr11:22376065-22376065|G/T|missense_variant'] 138902 12620 YKGNQTAL True PC9_epitope_Rep4 893.4606811274899 893.45958993586 56.382 2 -0.49445745409687625 0.14102691429138942 0.9485794690186473 ['ENST00000466187.2_1_10:70105306-70105504:-|nuORF'] 58375 14778 LENLLSHTI True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 61.98 2 -0.4944828243554499 0.14102691429138942 0.9485923935308037 ['ENSG00000239810|ENST00000619922|PRAMEF11', 'ENSG00000270601|ENST00000622421|PRAMEF5', 'ENSG00000232423|ENST00000376189|PRAMEF6', 'ENSG00000280267|ENST00000624207|PRAMEF26', 'ENSG00000243073|ENST00000235349|PRAMEF4', 'ENSG00000229571|ENST00000619661|PRAMEF25', 'ENSG00000204501|ENST00000376152|PRAMEF15', 'ENSG00000274764|ENST00000436041|PRAMEF27', 'ENSG00000204505|ENST00000415919|PRAMEF9'] 70912 5544 LYEYLDIKCVP True NCI_RA007_Epitope_Rep2 1354.6842753525398 1354.68262490379 26.181 3 -0.4945048329610658 0.14102691429138942 0.9486036031215053 ['ENSG00000258484|ENST00000310673|SPESP1'] 45183 10086 IPQNQKAI True PC9_epitope_Rep1 910.5236157372199 910.52250993586 43.667 2 -0.49461611672907285 0.14103879766949154 0.9486602492406824 ['ENST00000582341.1_1_17:73038242-73038745:-|nuORF', 'nc|ENSG00000167863|O75947-2|ATP5PD', 'ENSG00000167863|ENST00000301587|ATP5PD'] 71620 9010 MDPFNHRIF True NCI_RA007_Epitope_Rep3 1175.5545985956699 1175.5535099358601 42.536 2 -0.4946461739846981 0.14103879766949154 0.9486755394398023 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 86393 8726 QKFEKDQII True PC9_epitope_Rep3 1147.6237237013097 1147.62208490379 38.516 3 -0.4946787531241816 0.14106956651273647 0.9486921078863468 ['ENSG00000136021|ENST00000360820|SCYL2', 'ENST00000549486.1_1_12:100685283-100685439:+|nuORF'] 63302 10140 LLSSTWATNDP True H1975_Epitope_Rep3 1203.57716743171 1203.57606993586 44.047 2 -0.49480584332024286 0.14113110114367997 0.9487566947552878 ['ENST00000225388.8_1_17:27591126-27591243:-|nuORF'] 130268 13922 VSGGVLSNLAL True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 65.392 2 -0.494809682810726 0.14113110114367997 0.9487586448314068 ['ENSG00000164933|ENST00000297578|SLC25A32'] 54323 5003 KYDKAYQR True NCI_RA007_Epitope_Rep3 1070.55089311422 1070.5497899358602 26.675 2 -0.4949464956610505 0.14115953062676884 0.9488280883749983 ['ENST00000317243.9_1_19:2832388-2833811:+|nuORF'] 94237 4663 RRQEWERQYRK True NCI_RA007_Epitope_Rep2 1633.8549544610098 1633.85329490379 22.763 3 -0.49494824251393155 0.14115953062676884 0.9488289744946419 ['ENSG00000159450|ENST00000614923|TCHH'] 140451 25256 YRHRRKYF True H1975_Epitope_Rep3 1224.6628436050398 1224.6617499358601 105.05 2 -0.49501033883806445 0.14117374466254012 0.9488604648847141 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 49887 6715 KIGFKPAG True H1975_Epitope_Rep2 816.4857736765199 816.48466993586 30.741 2 -0.49513248288192413 0.14119983450558543 0.9489223558104383 ['ENSG00000023697|ENST00000428559|DERA'] 66298 16502 LSFPRYNVA True PC9_epitope_Rep6 1065.5607295219302 1065.5596299358601 75.905 2 -0.4951570927351739 0.14119983450558543 0.948934817559076 ['ENSG00000143228|ENST00000271452|NUF2', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF'] 12883 11972 DLILNDFVR True NCI_RA007_Epitope_Rep1 1103.59750895347 1103.59640993586 50.555 2 -0.4951698442414247 0.14119983450558543 0.9489412734915399 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000451871.1_1_13:42499863-42500601:+|nuORF'] 556 6366 AAQESSPM True PC9_epitope_Rep5 819.34326841675 819.3421699358599 29.464 2 -0.49520231350590876 0.14121404693343925 0.9489577089653932 ['ENST00000485596.5_1_15:85634092-85681131:+|nuORF', 'nc|ENSG00000073417|O60658-6|PDE8A', 'nc|ENSG00000073417|O60658-2|PDE8A', 'ENSG00000073417|ENST00000394553|PDE8A'] 112874 7925 TLKIQPAE True NCI_RA007_Epitope_Rep4 898.5123823471799 898.51128993586 37.227 2 -0.49544987023964265 0.14131100335942542 0.9490828620551689 ['nc|ENSG00000276597|A0A5A6|TRBV11-3', 'nc|ENSG00000211720|A0A0K0K1C0|TRBV11-1'] 23607 16240 EWIELRLSLEE True H1975_Epitope_Rep1 1415.7296453218298 1415.7285499358602 67.816 2 -0.49567001307340247 0.1413583107168862 0.9491939238623864 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant'] 43462 17163 IGGVSKSAEV True PC9_epitope_Rep1 945.51311062317 945.51200993586 70.838 2 -0.495691751756185 0.14137018037398644 0.949204879171399 ['ENST00000553399.1_1_14:68282450-68282693:-|nuORF'] 6478 6980 APSLEQRK True PC9_epitope_Rep4 927.5137793295099 927.51268993586 34.092 2 -0.4957043441870445 0.14137018037398644 0.9492112242129315 ['ENST00000325748.8_1_2:179315776-179315911:-|nuORF'] 120861 6159 VEMDCFFP True NCI_RA007_Epitope_Rep5 986.38777608102 986.38666993586 30.369 2 -0.49576214567341237 0.14138923820239593 0.9492403399330401 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'nc|ENSG00000160145|O60229-5|KALRN', 'ENST00000393496.5_1_3:124223749-124393462:+|nuORF'] 46286 16436 ISPTQTQLL True PC9_epitope_Rep5 999.5600608155898 999.55896993586 68.219 2 -0.4958317990393006 0.14138923820239593 0.9492754057334724 ['ENST00000450253.6_1_4:99801895-99802249:-|nuORF'] 45365 7095 IQDNHDGTYTV True PC9_epitope_Rep4 1261.55749461629 1261.5563899358601 34.558 2 -0.49583395307302996 0.14138923820239593 0.949276489797824 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 75626 18102 NLEASHYLI True PC9_epitope_Rep2 1058.53965972418 1058.53856993586 74.931 2 -0.49586214070688783 0.14138923820239593 0.9492906739187379 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|5|1|sense'] 4947 11391 ALGEVPDGTV True PC9_epitope_Rep5 956.4814761417199 956.48036993586 48.814 2 -0.4958662233355883 0.14138923820239593 0.9492927280168869 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant'] 43746 10066 IHHLHEEWLIK True NCI_RA007_Epitope_Rep5 1453.78301830737 1453.7813849037902 45.357 3 -0.49588304939315375 0.14138923820239593 0.9493011929433026 ['nc|ENSG00000166548|O00142-5|TK2', 'nc|ENSG00000166548|O00142-2|TK2', 'nc|ENSG00000166548|O00142-3|TK2', 'nc|ENSG00000166548|O00142-4|TK2', 'ENSG00000166548|ENST00000544898|TK2', 'nc|ENSG00000166548|O00142-6|TK2'] 17111 10194 EGLTDVIRDVP True NCI_RA007_Epitope_Rep1 1212.6350166609998 1212.6339099358602 43.664 2 -0.49591605712063086 0.14140110526489957 0.9493177949254271 ['ENSG00000155034|ENST00000382368|FBXL18'] 109873 6698 TEETATTVVA True H1975_Epitope_Rep3 1020.4975201286799 1020.49642993586 30.718 2 -0.495939884976442 0.14140110526489957 0.9493297766470817 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 133099 25593 VVQEPRRII True PC9_epitope_Rep1 1108.67167695324 1108.6705699358602 103.46 2 -0.49594851307125737 0.1414295168762409 0.9493341146149277 ['ENSG00000169071|ENST00000375708|ROR2', 'ROR2|p.S608Afs*15|1|0.23|ENSG00000169071|chr9:91724673-91724673|G/-|frameshift_variant'] 16709 5510 EERVWEYPEGV True H1975_Epitope_Rep1 1391.6357449369898 1391.6346499358601 26.256 2 -0.4959704393283349 0.1414295168762409 0.9493451370300658 ['ENSG00000104142|ENST00000220509|VPS18', 'VPS18|p.D357Gfs*27|1|0.25|ENSG00000104142|chr15:40899884-40899885|-/G|frameshift_variant'] 101034 10680 SLGCLHFLTR True PC9_epitope_Rep1 1145.60154878809 1145.59990490379 45.971 3 -0.49604747157752926 0.14145558625481858 0.9493838443645732 ['ENST00000257572.5_1_12:117298642-117298795:-|nuORF'] 90744 3490 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5870849037901 19.377 3 -0.49607543512153346 0.14145558625481858 0.9493978889731792 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 138077 15737 YGFPPDLTLT True NCI_RA007_Epitope_Rep5 1122.5597264624198 1122.5586299358602 67.25 2 -0.4960962840703098 0.14145558625481858 0.949408358019218 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 100197 18721 SIVDFTEQFLK True PC9_epitope_Rep2 1325.68671788069 1325.68562993586 77.384 2 -0.4961159497763194 0.14146979021904574 0.9494182311314511 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant'] 39311 2625 HIRRRLIQRR True NCI_RA007_Epitope_Rep4 1402.88580109682 1402.8847099358602 14.72 2 -0.4961339499951384 0.14149819673758396 0.9494272665737612 ['SPATA31D1|p.P1525Hfs*33|1|0.1|ENSG00000214929|chr9:81995043-81995043|C/-|frameshift_variant', 'ENSG00000214929|ENST00000344803|SPATA31D1'] 97876 7871 SELREHRAA True H1975_Epitope_Rep3 1067.54720471611 1067.5461099358602 35.251 2 -0.4962405960215081 0.14149819673758396 0.9494807692017625 ['nc|ENSG00000059915|A5PKW4-2|PSD', 'ENSG00000059915|ENST00000020673|PSD'] 135978 18824 WQLLASTCTS True PC9_epitope_Rep5 1108.52229540788 1108.52118993586 77.421 2 -0.49641138144582164 0.14157857296474596 0.9495663437305402 ['ENST00000371019.3_1_10:99093242-99093407:-|nuORF'] 54267 6511 KWQEKNIV True PC9_epitope_Rep4 1043.5763795860698 1043.5752899358602 32.166 2 -0.4964185996918542 0.14159043160350046 0.9495699576714539 ['ENSG00000161654|ENST00000293406|LSM12', 'nc|ENSG00000161654|Q3MHD2-2|LSM12'] 27948 10870 FQEKRQWLLKY True H1975_Epitope_Rep3 1537.8405331834897 1537.8388949037903 46.894 3 -0.49642911708860077 0.14159043160350046 0.9495752229739179 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 66899 12792 LSNLQRTKRQP True NCI_RA007_Epitope_Rep1 1339.76843087239 1339.76732993586 53.745 2 -0.49645215215532434 0.14160463192721257 0.9495867532486552 ['ENST00000541377.5_1_2:122363504-122363705:-|nuORF'] 27172 16534 FLLFQMYKLWD True PC9_epitope_Rep3 1502.76319437958 1502.76208993586 68.736 2 -0.49647463827095567 0.1416519164281815 0.9495980064630163 ['ENST00000319725.9_1_9:133512585-133512708:+|nuORF'] 33888 16513 GLPSLGIWL True PC9_epitope_Rep5 954.5538532363399 954.55274993586 68.518 2 -0.49647812468131053 0.14166377185582188 0.9495997510411734 ['ENST00000392062.6_1_2:227731973-227771552:+|nuORF'] 83496 9746 PTSAASLPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43833496793 45.402 1 -0.49647938734561686 0.14166377185582188 0.9496003828572153 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L'] 139004 12787 YKVEQKVFL True PC9_epitope_Rep6 1152.6542955536 1152.65263490379 60.683 3 -0.49649225831460236 0.14167562649904888 0.9496068228689578 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3', 'ADGRL3|p.G194Efs*19|1|0.27|ENSG00000150471|chr4:61732939-61732939|G/-|frameshift_variant', 'ADGRL3|p.S348Mfs*4|1|0.22|ENSG00000150471|chr4:61733401-61733402|-/T|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-3|ADGRL3'] 69259 14399 LTTFPRLR True PC9_epitope_Rep1 1002.5974493838198 1002.59634993586 60.21 2 -0.49649548911606206 0.14167562649904888 0.9496084392902068 ['MTTP|p.A286Pfs*63|1|0.36|ENSG00000138823|chr4:99594829-99594829|G/-|frameshift_variant'] 12389 9608 DISRNQLL True PC9_epitope_Rep1 957.5243440132099 957.52324993586 41.813 2 -0.49653227544759765 0.14176783883026234 0.9496268407970926 ['ENSG00000187554|ENST00000642603|TLR5'] 136602 5688 WWNRMSNRFRK True NCI_RA007_Epitope_Rep4 1579.7942687807497 1579.79263490379 28.489 3 -0.49653613048861167 0.14176783883026234 0.949628768842822 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 70176 21760 LVPYWELI True PC9_epitope_Rep5 1031.56916894731 1031.5680699358602 88.729 2 -0.49654053270148235 0.14176783883026234 0.9496309704680957 ['SPEF2|p.D1760Tfs*2|1|0.1|ENSG00000152582|chr5:35807152-35807152|G/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2'] 55641 15309 LAKKNIRKRG True NCI_RA007_Epitope_Rep4 1182.7673086735797 1182.7662099358602 66.54 2 -0.49657096467991946 0.14179388366054152 0.9496461876841159 ['nc|ENSG00000076344|O94810-3|RGS11', 'nc|ENSG00000076344|O94810-2|RGS11', 'ENSG00000076344|ENST00000397770|RGS11', 'ENST00000493449.5_1_16:322367-324481:-|nuORF'] 66813 4691 LSLWEIYVSP True NCI_RA007_Epitope_Rep2 1205.6332257558497 1205.63158490379 22.873 3 -0.49661261666907086 0.14179388366054152 0.9496670086759104 ['DCSTAMP|p.P332Qfs*7|1|0.12|ENSG00000164935|chr8:104349546-104349546|C/-|frameshift_variant', 'ENSG00000164935|ENST00000297581|DCSTAMP', 'DCSTAMP|p.Y198Tfs*34|1|0.2|ENSG00000164935|chr8:104349144-104349144|T/-|frameshift_variant', 'nc|ENSG00000164935|Q9H295-2|DCSTAMP'] 69448 15921 LTYRMTKRRDR True H1975_Epitope_Rep1 1494.8201491754198 1494.8190499358602 66.551 2 -0.49662655543864104 0.14179388366054152 0.9496739746626313 ['ENST00000446662.5_1_16:22466144-22470768:+|nuORF'] 86634 17816 QLFLDAIHP True PC9_epitope_Rep5 1052.5654805492 1052.5643899358602 73.548 2 -0.49665908021267197 0.1418033871394549 0.9496902257596284 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX'] 127573 11738 VNSYFDSFL True NCI_RA007_Epitope_Rep5 1090.49712620586 1090.4960299358602 51.807 2 -0.4966618978842802 0.1418033871394549 0.9496916333959275 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 31026 6440 GASTMVLHIP True H1975_Epitope_Rep2 1024.5375515491999 1024.5364499358602 29.691 2 -0.4966927060770025 0.1418033871394549 0.9497070220740422 ['ENST00000462685.1_1_2:74159806-74173970:+|nuORF', 'nc|ENSG00000114956|Q16854-6|DGUOK', 'DGUOK|p.A86Sfs*43|1|0.3|ENSG00000114956|chr2:73939017-73939018|-/A|frameshift_variant'] 32529 11367 GGGFADPRDAG True PC9_epitope_Rep1 1018.4468219684999 1018.44572993586 48.603 2 -0.4967911982163385 0.14181758041842388 0.9497561905561759 ['ENST00000556029.5_2_12:98909542-98909698:+|nuORF'] 65625 19592 LSAEVEPFIP True PC9_epitope_Rep1 1100.57537652656 1100.57426993586 80.189 2 -0.4968319546234488 0.1418625035143136 0.9497765240519412 ['ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L', 'ENST00000557923.1_1_15:49329786-49338496:-|nuORF', 'ENST00000380927.6_2_15:49327640-49338496:-|nuORF'] 113000 10908 TLLVNELK True H1975_Epitope_Rep3 928.5593325396 928.55822993586 47.045 2 -0.4969015185120089 0.1418625035143136 0.9498112126610214 ['POSTN|p.P680Qfs*5|1|0.38|ENSG00000133110|chr13:37574622-37574622|G/-|frameshift_variant', 'nc|ENSG00000133110|Q15063-7|POSTN', 'nc|ENSG00000133110|Q15063-6|POSTN', 'nc|ENSG00000133110|Q15063-4|POSTN', 'nc|ENSG00000133110|Q15063-10|POSTN', 'nc|ENSG00000133110|Q15063-2|POSTN', 'nc|ENSG00000133110|Q15063-3|POSTN', 'nc|ENSG00000133110|Q15063-9|POSTN', 'nc|ENSG00000133110|Q15063-8|POSTN', 'nc|ENSG00000133110|Q15063-5|POSTN', 'ENSG00000133110|ENST00000379747|POSTN', 'CON__Q2KJC7'] 48456 6910 KAAQVTAG True NCI_RA007_Epitope_Rep4 744.4130026590799 744.4124549679301 33.198 1 -0.49696452583674533 0.14193815114933026 0.9498426132622156 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 60702 3189 LHPSSSVP True NCI_RA007_Epitope_Rep2 822.4235673427801 822.42246993586 17.049 2 -0.4970007693099958 0.14193815114933026 0.9498606677383169 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28'] 20507 10498 EPMQQLLDP True PC9_epitope_Rep6 1069.5113963710098 1069.51028993586 51.158 2 -0.497010719569336 0.14193815114933026 0.9498656233829063 ['ENSG00000101463|ENST00000376862|SYNDIG1'] 16454 14944 EELEKFSKSK True H1975_Epitope_Rep1 1223.63976768827 1223.6386699358602 62.72 2 -0.4970401554693722 0.14196887764382926 0.9498802811185497 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16'] 64929 8270 LQEESLPPP True H1975_Epitope_Rep3 1008.5127762699998 1008.51166993586 36.792 2 -0.49709332670806605 0.1419996031221061 0.9499067482266339 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 367 7461 AAKQGLSNI True PC9_epitope_Rep4 900.5028802926399 900.50178993586 36.054 2 -0.49710781831265954 0.14200674647794168 0.9499139595537339 ['ENST00000481441.1_1_6:33164057-33166316:-|nuORF'] 60093 12000 LGLRPLHQL True PC9_epitope_Rep2 1045.63964854897 1045.63854993586 51.475 2 -0.4971381799884501 0.14200674647794168 0.9499290651401893 ['ENST00000318430.9_1_17:76134666-76137438:+|nuORF'] 23458 8043 EVTMGVAA True H1975_Epitope_Rep2 776.3738402690399 776.37274993586 35.887 2 -0.4971403030809182 0.14200674647794168 0.9499301212712963 ['ENSG00000142530|ENST00000600100|GARIN5A', 'nc|ENSG00000142530|Q6IPT2-2|GARIN5A', 'ENST00000600330.1_1_19:50978580-50979281:-|nuORF'] 66079 12660 LSEITRVDGRK True NCI_RA007_Epitope_Rep1 1272.7149983171996 1272.71390993586 53.226 2 -0.49714194001411904 0.14200674647794168 0.9499309355491017 ['PSME4|p.K1803Sfs*16|1|0.04|ENSG00000068878|chr2:53866215-53866216|-/CTTTTTGCTG|frameshift_variant', 'ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'PSME4|p.E1290Kfs*13|1|0.06|ENSG00000068878|chr2:53895051-53895051|C/-|frameshift_variant', 'PSME4|p.K1439Nfs*14|1|0.2|ENSG00000068878|chr2:53888795-53888795|C/-|frameshift_variant', 'PSME4|p.C958Lfs*2|1|0.06|ENSG00000068878|chr2:53906670-53906671|-/T|frameshift_variant'] 35667 8198 GTEALALAN True PC9_epitope_Rep5 858.44469671018 858.44358993586 36.473 2 -0.49719922770678643 0.14203746878978785 0.9499594253088544 ['ENST00000531958.5_1_11:67183879-67184254:+|nuORF'] 93337 9204 RPVKIRKIRAR True NCI_RA007_Epitope_Rep5 1391.93135430691 1391.93024993586 42.054 2 -0.4972197830474993 0.1420516551473263 0.9499696441401825 ['ENSG00000120158|ENST00000381750|RCL1', 'ENST00000442869.5_1_9:4793091-4833155:+|nuORF'] 36145 11213 GVAPGTTLAP True PC9_epitope_Rep4 882.4810822188999 882.47998993586 50.907 2 -0.4973227558948983 0.14208002645502646 0.9500208075690002 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 62334 8646 LLGGAKPGP True PC9_epitope_Rep1 808.48068829608 808.47958993586 38.095 2 -0.49733344341538627 0.14208002645502646 0.950026115108536 ['ENSG00000176678|ENST00000320241|FOXL1'] 18311 5901 EISDIHVTG True NCI_RA007_Epitope_Rep2 969.4767251144501 969.47562993586 27.57 2 -0.4973555833408476 0.14212023014350902 0.9500371084235884 ['ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST', 'nc|ENSG00000151914|Q03001-12|DST'] 93993 24459 RRKKRFAK True NCI_RA007_Epitope_Rep3 1088.7043144941997 1088.70377496793 105.85 1 -0.49735760994721895 0.14212023014350902 0.9500381146019637 ['ENSG00000271447|ENST00000605424|MMP28', 'nc|ENSG00000271447|Q9H239-2|MMP28'] 32079 13719 GESPMPFK True PC9_epitope_Rep1 891.41603943419 891.41494993586 57.619 2 -0.4973658458872551 0.14212023014350902 0.9500422034296991 ['nc|ENSG00000149488|Q8TDI7-4|TMC2'] 101918 21024 SLPVFAAV True PC9_epitope_Rep2 802.4588902223398 802.4583449679301 86.322 1 -0.49736606876346684 0.14212023014350902 0.9500423140749864 ['ENSG00000188897|ENST00000696174|unknown', 'ENST00000595170.1_3_16:11556095-11569480:-|nuORF'] 67860 11364 LTAPAVEAP True H1975_Epitope_Rep2 867.4701831820299 867.46963496793 48.76 1 -0.49740508814447115 0.14213441349094816 0.9500616815642455 ['ENSG00000160972|ENST00000435887|PPP1R16A', 'ENST00000526183.5_1_8:145725999-145727283:+|nuORF'] 58832 4948 LESRFEKMYEK True NCI_RA007_Epitope_Rep2 1458.71770073914 1458.71605490379 23.867 3 -0.4974791142051783 0.14216512912078827 0.9500984062266669 ['ENSG00000174231|ENST00000304992|PRPF8'] 102018 13346 SLQRGLEL True PC9_epitope_Rep1 914.5185303567798 914.51742993586 56.195 2 -0.49756136128235173 0.14219349292421637 0.9501391808140195 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1'] 33855 12627 GLPHFSSGI True PC9_epitope_Rep2 913.46576650793 913.46466993586 53.879 2 -0.497577003367523 0.14219349292421637 0.9501469320887203 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 58749 8245 LESDMSNGWDP True H1975_Epitope_Rep1 1249.4921174784101 1249.49102993586 36.656 2 -0.4976766563339786 0.14220532319391635 0.9501962885525836 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L'] 109611 5026 TEAEGESPSPA True H1975_Epitope_Rep3 1073.4512982122499 1073.4502099358601 24.453 2 -0.4976857796359274 0.14220532319391635 0.950200804966557 ['MAGEB18|p.V32E|1|0.15|ENSG00000176774|chrX:26139080-26139080|T/A|missense_variant'] 101078 9446 SLGGFEITPP True H1975_Epitope_Rep1 1016.5178616504398 1016.51676993586 41.25 2 -0.49773516901211545 0.14221950372782727 0.9502252483359169 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000426339.1_1_10:98320174-98320360:+|nuORF', 'ENST00000423757.1_1_7:149031294-149031639:+|nuORF', 'ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 66916 9905 LSNNSLLVP True PC9_epitope_Rep1 955.5338460677499 955.53274993586 42.957 2 -0.49778999509690114 0.14225021490445017 0.9502523696872747 ['ENSG00000226979|ENST00000418386|LTA'] 100646 11784 SLDGRELAL True PC9_epitope_Rep2 972.5240096600398 972.52290993586 50.659 2 -0.49789562156507855 0.1422974559039889 0.9503045832544401 ['ENSG00000183798|ENST00000332312|EMILIN3'] 59705 8134 LGATGGDVVSA True PC9_epitope_Rep4 945.4767251144499 945.47562993586 38.741 2 -0.4979205835541024 0.14231163421165735 0.9503169152803895 ['ENSG00000174292|ENST00000688331|TNK1', 'nc|ENSG00000174292|Q13470|TNK1'] 18119 15237 EIIMCNIRP True PC9_epitope_Rep1 1087.5518217143501 1087.55072993586 63.429 2 -0.49798270290753055 0.14235651943930178 0.9503475922006974 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1'] 19566 13296 ELQELRRQMK True H1975_Epitope_Rep1 1329.7187037986498 1329.71760993586 56.247 2 -0.4979890647188714 0.14235651943930178 0.9503507329374979 ['ENSG00000058453|ENST00000375541|CROCC', 'nc|ENSG00000058453|Q5TZA2-2|CROCC'] 111985 15554 TIRDYSSYY True H1975_Epitope_Rep2 1166.52440358286 1166.5233099358602 64.984 2 -0.49800860361264965 0.1423801652892562 0.9503603778880135 ['CON__Q9D312'] 47509 19853 IVREVIEE True PC9_epitope_Rep2 985.5444107514498 985.54330993586 81.756 2 -0.4980444351371416 0.1423801652892562 0.9503780609247577 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML'] 13911 18484 DQVSDVCNSP True NCI_RA007_Epitope_Rep4 1062.42878894586 1062.4282749679298 80.005 1 -0.49809334625159396 0.1423801652892562 0.9504021895756634 ['nc|ENSG00000134265|Q99747-2|NAPG', 'ENSG00000134265|ENST00000322897|NAPG'] 126402 6794 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 32.755 3 -0.4981137193989417 0.1423801652892562 0.9504122368383532 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 13040 8733 DLNSGNIDVP True NCI_RA007_Epitope_Rep1 1042.49310345458 1042.49200993586 37.972 2 -0.4982285352763873 0.14239198704175068 0.9504688250960441 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 99876 5067 SILRDHPENR True NCI_RA007_Epitope_Rep2 1235.63708234967 1235.6359899358602 24.336 2 -0.498274477926925 0.14239198704175068 0.9504914519779745 ['ENSG00000089723|ENST00000203664|OTUB2', 'nc|ENSG00000089723|Q96DC9-2|OTUB2'] 46912 17881 ITNCLKLL True PC9_epitope_Rep5 916.54157430048 916.54046993586 73.797 2 -0.4983331392456227 0.14239674748376221 0.9505203291644276 ['ENSG00000118308|ENST00000556887|IRAG2', 'nc|ENSG00000118308|Q12912|IRAG2'] 8964 18985 AVGGALAGLV True PC9_epitope_Rep2 826.4912529797799 826.49070496793 78.391 1 -0.49836843941799785 0.14239674748376221 0.9505376989747909 ['ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENST00000472564.1_1_13:113976589-113976733:+|nuORF'] 68807 17860 LTLPSHRMP True PC9_epitope_Rep3 1050.56443500338 1050.56332993586 73.897 2 -0.49837691600607203 0.14239674748376221 0.9505418691393341 ['ENST00000299613.10_1_11:9596239-9596734:+|nuORF'] 111495 18407 THYDHVLIEL True PC9_epitope_Rep3 1238.6295373577398 1238.62789490379 76.01 3 -0.49843061607357514 0.14239674748376221 0.9505682801217922 ['ENSG00000076003|ENST00000264156|MCM6'] 97654 11163 SEGLAQLTS True PC9_epitope_Rep1 904.45017601344 904.44906993586 47.824 2 -0.49850736380293964 0.14239674748376221 0.9506060041736569 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 17075 18488 EGIIHSLVLRN True PC9_epitope_Rep5 1249.7142700412098 1249.7131699358602 76.137 2 -0.49855246230320505 0.1424085673205639 0.9506281593250708 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000462914.3_1_8:21957359-21958496:+|nuORF', 'ENST00000491733.2_1_8:21958038-21958496:+|nuORF'] 129317 21756 VQWPATQQGML True PC9_epitope_Rep5 1257.6175927750498 1257.61648993586 88.713 2 -0.4985869812740114 0.1424085673205639 0.9506451110314966 ['ENSG00000072071|ENST00000361434|ADGRL1', 'nc|ENSG00000072071|O94910|ADGRL1', 'ADGRL1|p.G690Afs*56|1|0.33|ENSG00000072071|chr19:14159185-14159185|C/-|frameshift_variant', 'ADGRL1|p.N732Rfs*16|1|0.07|ENSG00000072071|chr19:14158522-14158523|-/GTACC|frameshift_variant', 'ENST00000589616.1_1_19:14270562-14272319:-|nuORF'] 75516 23119 NKRSFQLHQ True PC9_epitope_Rep1 1156.61013932584 1156.6090499358602 93.722 2 -0.49861635768661816 0.14241097248616047 0.9506595331233465 ['nc|ENSG00000183423|Q3SXY7-2|LRIT3', 'ENSG00000183423|ENST00000594814|LRIT3'] 63460 5687 LLWCPQVP True NCI_RA007_Epitope_Rep2 954.4997094884999 954.49860993586 26.734 2 -0.4986934290757195 0.14241097248616047 0.9506973523383809 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 99053 17071 SHFVSDVVI True PC9_epitope_Rep5 1001.5181960036099 1001.51708993586 70.683 2 -0.49873368668905727 0.14241097248616047 0.9507170963560253 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 63306 7028 LLSTTTVP True H1975_Epitope_Rep3 830.4749342093 830.47382993586 31.996 2 -0.498733834384607 0.14241097248616047 0.9507171687787805 ['ENSG00000255307|ENST00000530810|OR52B2'] 110155 3956 TENWLSEWWLK True NCI_RA007_Epitope_Rep2 1490.7194149913 1490.71777490379 20.025 3 -0.4987410307326793 0.14241097248616047 0.950720697401894 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT', 'nc|ENSG00000095321|P43155-2|CRAT'] 48962 12765 KEEQRKLREER True H1975_Epitope_Rep3 1499.8168376167898 1499.8157499358601 54.314 2 -0.49878161404588106 0.14241097248616047 0.9507405925020459 ['ENST00000468597.5_1_22:38082399-38086802:+|nuORF', 'ENST00000493862.5_1_22:38077834-38087340:+|nuORF', 'ENSG00000273899|ENST00000359114|NOL12'] 81358 18448 PLCSHAASTV True PC9_epitope_Rep5 984.4698659122 984.46876993586 75.981 2 -0.4989018130081822 0.14246765478610024 0.950799474316897 ['ENST00000460468.5_1_10:61898403-61898508:-|nuORF'] 117126 4240 TVKKNYEAL True NCI_RA007_Epitope_Rep4 1064.5866099165999 1064.58550993586 22.626 2 -0.49891657353224944 0.14246765478610024 0.9508067005995761 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 20448 19247 EPGSAFLQL True PC9_epitope_Rep5 960.4916469026 960.49109496793 79.072 1 -0.4989513241837546 0.14246765478610024 0.9508237095688674 ['ENSG00000161509|ENST00000293190|GRIN2C'] 113566 7973 TLTWTSFSS True NCI_RA007_Epitope_Rep4 1028.48147614172 1028.4803699358602 37.422 2 -0.49898108078724784 0.14246765478610024 0.9508382698753005 ['GSDMD|p.G211Afs*55|1|0.13|ENSG00000104518|chr8:143561053-143561053|G/-|frameshift_variant'] 15833 9627 EDELKEFHMK True NCI_RA007_Epitope_Rep2 1304.607087661 1304.6059899358602 42.062 2 -0.49901070897795596 0.1424747616608562 0.9508527634164641 ['ENSG00000159592|ENST00000355105|GPBP1L1', 'ENST00000487436.1_1_1:46093930-46096305:-|nuORF'] 42187 14063 IDRDTKVI True PC9_epitope_Rep5 958.5447451046199 958.54364993586 59.107 2 -0.49905023649366786 0.1424747616608562 0.9508720934087481 ['nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 20936 5852 EQNWRQHREAY True H1975_Epitope_Rep1 1515.69672248411 1515.69508490379 27.58 3 -0.4990756318611871 0.1424747616608562 0.9508845087251219 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 57786 6517 LEERKTDP True NCI_RA007_Epitope_Rep1 986.5032742154599 986.50216993586 29.364 2 -0.4990829835795605 0.1424747616608562 0.9508881023035478 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L', 'nc|ENSG00000126217|O15068-5|MCF2L'] 93628 22921 RQQIFLRV True PC9_epitope_Rep1 1058.6348975217 1058.6338099358602 92.964 2 -0.4991091286232197 0.14248422165680866 0.9509008802513589 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'TBC1D1|p.P709Hfs*44|1|0.41|ENSG00000065882|chr4:38090002-38090002|C/-|frameshift_variant', 'ENST00000469803.1_1_4:38051397-38056602:+|nuORF'] 120342 8003 VEEEHDRRG True H1975_Epitope_Rep1 1125.51629851065 1125.5152099358602 35.727 2 -0.499145877236129 0.14248422165680866 0.9509188353477315 ['RNF152|p.Q155H|1|0.07|ENSG00000176641|chr18:61815999-61815999|C/A|missense_variant'] 129491 25270 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 110.14 2 -0.49914855449666035 0.14248422165680866 0.9509201432011561 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 117534 15434 TVSEGFHVGL True PC9_epitope_Rep3 1044.52400966004 1044.52290993586 64.521 2 -0.4991990887850908 0.14252907745175786 0.9509448234089438 ['ENSG00000095587|ENST00000357947|TLL2'] 113108 15173 TLNYIHMNLF True PC9_epitope_Rep2 1264.6274291827601 1264.62577490379 63.619 3 -0.4992063133471006 0.14252907745175786 0.9509483508463921 ['GLP2R|p.R210L|1|0.35|ENSG00000065325|chr17:9857440-9857440|G/T|missense_variant'] 135774 20420 WMNSILPI True PC9_epitope_Rep2 972.5102741721998 972.50916993586 83.973 2 -0.49924119745423395 0.142559764740868 0.9509653799443626 ['nc|ENSG00000158055|Q8TE85-2|GRHL3'] 47061 15720 ITSKSITYL True PC9_epitope_Rep4 1024.580461907 1024.57936993586 68.392 2 -0.4992461051004228 0.1425715748955081 0.9509677752343635 ['ENST00000484167.5_1_2:242282419-242283206:+|nuORF'] 112581 12585 TLEMQKSL True PC9_epitope_Rep1 948.4950180308799 948.49392993586 53.275 2 -0.4992542721396406 0.1425715748955081 0.9509717611075501 ['ENST00000439830.5_1_3:15793291-15836743:-|nuORF'] 135792 7637 WMWWRRNRRGK True NCI_RA007_Epitope_Rep1 1630.8527867163796 1630.85113490379 33.699 3 -0.4993119593602484 0.14258573977400382 0.9509999065032049 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 61649 19822 LKQTSRKKKKE True NCI_RA007_Epitope_Rep4 1372.8514322203598 1372.84978490379 85.681 3 -0.4993856922226399 0.1426329440140089 0.9510358588349297 ['ENSG00000119720|ENST00000354366|NRDE2'] 131316 18066 VTGIPPFPP True PC9_epitope_Rep3 923.5116540711899 923.51054993586 74.688 2 -0.4995693423876539 0.14267543280031716 0.9511253013402251 ['ENST00000368921.4_1_1:151040175-151040232:+|nuORF'] 71625 14123 MDPFNHRIF True PC9_epitope_Rep3 1175.5545985956699 1175.5535099358601 59.41 2 -0.499596980874311 0.14267543280031716 0.9511387489434764 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 60104 11492 LGLTDHAEL True PC9_epitope_Rep6 967.49746055903 967.49636993586 55.278 2 -0.4996000497981916 0.14267543280031716 0.9511402419281956 ['OR5J2|p.C97Sfs*21|1|0.27|ENSG00000174957|chr11:56176907-56176907|G/-|frameshift_variant', 'OR5J2|p.A25Sfs*97|1|0.25|ENSG00000174957|chr11:56176685-56176686|-/A|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 53272 4705 KQKIERLLK True NCI_RA007_Epitope_Rep4 1154.7499272739399 1154.7482849037901 24.527 3 -0.4997235031673811 0.14272027486867753 0.9512002651281675 ['SYNE2|p.E1023K|1|0.16|ENSG00000054654|chr14:63997073-63997073|G/A|missense_variant'] 84670 14164 QDIQLVAAL True NCI_RA007_Epitope_Rep4 969.5494961318899 969.54838993586 61.761 2 -0.4997620421103687 0.14272027486867753 0.9512189888304609 ['ENSG00000179029|ENST00000437139|TMEM107'] 3133 5314 AGAREGVSVQY True H1975_Epitope_Rep2 1135.56218607391 1135.56108993586 25.491 2 -0.4998248111249479 0.14273916490486258 0.951249470185225 ['ENST00000311177.6_1_17:46700370-46700481:-|nuORF'] 57177 12760 LDVDSFDECI True H1975_Epitope_Rep1 1154.48015581238 1154.47904993586 54.142 2 -0.499844231415743 0.14273916490486258 0.9512588973244507 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 45899 19911 ISDVVNYFLSV True PC9_epitope_Rep4 1254.64960409598 1254.6485099358601 84.722 2 -0.49986916014506105 0.14273916490486258 0.9512709959320578 ['ENST00000368468.3_1_6:119499937-119500069:-|nuORF'] 1526 6439 AEENPSYK True H1975_Epitope_Rep3 936.41887588516 936.41776993586 29.745 2 -0.49988054745668603 0.14273916490486258 0.9512765215850018 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 135152 7588 WELGQVHPP True H1975_Epitope_Rep3 1061.52942939365 1061.52832993586 34.168 2 -0.49988223022935796 0.14273916490486258 0.9512773380952233 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 57632 9270 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 40.601 2 -0.4998943600218543 0.14273916490486258 0.9512832233034225 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 1684 4806 AEGEKHTEK True H1975_Epitope_Rep3 1027.4934378077498 1027.4923499358601 23.615 2 -0.499926346302147 0.1427533239739037 0.9512987394424065 ['ENST00000418257.1_1_10:91122507-91122987:+|nuORF'] 9255 21526 AVPEVAVYL True PC9_epitope_Rep1 959.5327834385898 959.53168993586 87.631 2 -0.49998478017136366 0.14276748257523206 0.9513270731248135 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 58919 7036 LETIEVYDP True H1975_Epitope_Rep2 1077.52300660053 1077.52190993586 31.988 2 -0.5000585430067701 0.14283118899367434 0.9513628177186032 ['ENSG00000188522|ENST00000388995|FAM83G'] 7773 9014 ASRSTFLDKI True PC9_epitope_Rep2 1136.61897267404 1136.61733490379 40.023 3 -0.5000902659142621 0.14285478357087414 0.9513781827567916 ['ENST00000558588.5_1_15:40583969-40599873:-|nuORF', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2'] 77722 13581 NTLGALPI True H1975_Epitope_Rep3 797.46470387877 797.4641549679301 57.522 1 -0.5001045502145731 0.14285478357087414 0.9513850999049337 ['ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-2|PAQR4'] 29123 11253 FTLSHGWAP True PC9_epitope_Rep1 1014.4923156089399 1014.49120993586 48.164 2 -0.5001056166807941 0.14285478357087414 0.9513856163026597 ['ENSG00000166278|ENST00000299367|C2'] 28421 4516 FSAPANGRDKK True NCI_RA007_Epitope_Rep3 1189.62036965637 1189.61872490379 24.62 3 -0.5001292727568929 0.14285478357087414 0.9513970695904428 ['COL6A6|p.D2019Rfs*12|1|0.45|ENSG00000206384|chr3:130661854-130661855|-/C|frameshift_variant', 'ENSG00000206384|ENST00000358511|COL6A6', 'COL6A6|p.D1304Vfs*12|1|0.12|ENSG00000206384|chr3:130582008-130582009|-/TAGATCTCAAACTTGGGAGAAT|frameshift_variant', 'COL6A6|p.D1304Lfs*23|1|0.12|ENSG00000206384|chr3:130582007-130582008|-/CT|frameshift_variant', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6', 'COL6A6|p.F458Vfs*15|1|0.19|ENSG00000206384|chr3:130566788-130566789|-/C|frameshift_variant', 'COL6A6|p.R581Vfs*21|1|0.05|ENSG00000206384|chr3:130567158-130567159|-/TGTTG|frameshift_variant'] 58631 11652 LERCRQQA True PC9_epitope_Rep1 1002.5028973759798 1002.50180993586 49.698 2 -0.5002040878000231 0.14291848328709209 0.9514332753905282 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 56401 9976 LDEAIRKVAT True NCI_RA007_Epitope_Rep3 1114.6346227381798 1114.63352993586 46.325 2 -0.5002912627916607 0.14297981966509232 0.9514754309382814 ['GLYATL2|p.S213Lfs*4|1|0.07|ENSG00000156689|chr11:58834677-58834677|A/-|frameshift_variant', 'ENSG00000156689|ENST00000287275|GLYATL2'] 65156 6895 LQNVQVPPP True H1975_Epitope_Rep2 990.5498304850599 990.54872993586 31.442 2 -0.500363127196906 0.14297981966509232 0.9515101570275167 ['ENST00000531236.1_1_11:71192815-71195619:+|nuORF'] 110523 12011 TFKLCNMYWNW True NCI_RA007_Epitope_Rep1 1504.66316306848 1504.66206993586 50.708 2 -0.5004332021579092 0.14299161107074443 0.9515439960910055 ['PIWIL2|p.H929N|1|0.15|ENSG00000197181|chr8:22355368-22355368|C/A|missense_variant'] 8450 10225 ATPLNQVANP True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 44.319 2 -0.500472743240589 0.14299161107074443 0.9515630806679672 ['nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H'] 107612 2758 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 14.692 2 -0.5005116250188014 0.1430057631652823 0.9515818401801485 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 48296 5882 IYQRHVYNL True NCI_RA007_Epitope_Rep3 1204.6352914445197 1204.6341899358601 30.114 2 -0.5005270141966729 0.14300810726020838 0.9515892632076187 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 65098 16391 LQLWQERERRQ True NCI_RA007_Epitope_Rep1 1540.8222573504 1540.82116993586 67.87 2 -0.5005521421598917 0.14300810726020838 0.95160138148687 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF', 'ENST00000498539.1_1_7:100174858-100175272:-|nuORF'] 22553 5822 ETIQAIAN True NCI_RA007_Epitope_Rep3 858.4446967101799 858.44358993586 29.88 2 -0.5006157021325948 0.14300810726020838 0.9516320214224352 ['ENSG00000103671|ENST00000261884|TRIP4'] 142762 22386 YYQSNEFI True PC9_epitope_Rep3 1062.46582607758 1062.46472993586 91.385 2 -0.5006752342965248 0.14300810726020838 0.951660703227687 ['nc|ENSG00000106278|P23471-3|PTPRZ1', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1'] 29758 5976 FVNTHPDK True NCI_RA007_Epitope_Rep4 956.4715801643598 956.47048993586 29.607 2 -0.5006856510918117 0.14300810726020838 0.9516657202631352 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 84060 20161 PVYASPGV True PC9_epitope_Rep2 788.4068546494799 788.40574993586 82.962 2 -0.5007073612033082 0.14300810726020838 0.9516761749241586 ['ENSG00000103335|ENST00000301015|PIEZO1'] 82541 11874 PPSDAALGL True PC9_epitope_Rep4 839.4388830537499 839.43778993586 53.447 2 -0.5008171388297343 0.143022257446668 0.9517290066741428 ['NPAP1|p.S181Afs*41|1|0.23|ENSG00000185823|chr15:24676400-24676400|C/-|frameshift_variant'] 34392 10313 GPGPALSIL True H1975_Epitope_Rep3 823.48035394291 823.47980496793 44.722 1 -0.5009153736392963 0.1430481945613948 0.9517762373468144 ['ENST00000588822.1_1_17:74722977-74723331:+|nuORF', 'ENST00000590964.5_1_17:74722977-74729181:+|nuORF'] 91261 25314 RGGQPLKKRR True H1975_Epitope_Rep1 1194.7421565549 1194.74050490379 104.86 3 -0.500932389006436 0.1430481945613948 0.9517844138150482 ['nc|ENSG00000183814|Q5TKA1-2|LIN9'] 70794 20515 LYAPTILLW True NCI_RA007_Epitope_Rep4 1088.6270181766 1088.62592993586 88.828 2 -0.5010102398350388 0.1430481945613948 0.9518218071908147 ['ENSG00000081051|ENST00000395792|AFP', 'AFP|p.P171H|1|0.29|ENSG00000081051|chr4:73442325-73442325|C/A|missense_variant', 'AFP|p.A182G|1|0.38|ENSG00000081051|chr4:73442358-73442358|C/G|missense_variant'] 19336 21080 ELLEFKFKYP True PC9_epitope_Rep2 1312.7067250492798 1312.70562993586 86.541 2 -0.5010484061841272 0.1430764912744143 0.951840129317153 ['ENSG00000138356|ENST00000374700|AOX1'] 12098 5309 DHYVSRVR True NCI_RA007_Epitope_Rep2 1030.5308263759798 1030.5297299358601 25.274 2 -0.5010727651493517 0.1430764912744143 0.9518518196460867 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 101407 15191 SLKNHDHPV True PC9_epitope_Rep4 1045.5304920228102 1045.52938993586 66.355 2 -0.5011623820925044 0.1431047861187697 0.9518948055162207 ['ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-4|GREB1'] 141752 6731 YTYRYFIHNWP True H1975_Epitope_Rep1 1558.7357337617798 1558.7340749037903 30.934 3 -0.5011634230395695 0.1431047861187697 0.9518953046067776 ['nc|ENSG00000139977|Q147X3-2|NAA30', 'ENSG00000139977|ENST00000556492|NAA30'] 19922 15397 ELVEKIIQT True PC9_epitope_Rep4 1071.6175756917098 1071.61646993586 67.157 2 -0.5011760754708249 0.14311893284025623 0.9519013705278818 ['ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18', 'nc|ENSG00000099246|Q9NP72-3|RAB18'] 67228 18227 LSRLNQDII True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 78.181 2 -0.501240827855818 0.14313307909464612 0.9519324033000452 ['nc|ENSG00000171495|Q7Z745-2|MROH2B', 'ENSG00000171495|ENST00000399564|MROH2B'] 60408 14561 LGTRFAPVP True PC9_epitope_Rep1 956.5443511817998 956.54324993586 60.834 2 -0.5012875586965423 0.14314722488196255 0.9519547874573134 ['ENSG00000175065|ENST00000308128|DSG4', 'nc|ENSG00000175065|Q86SJ6-2|DSG4'] 113042 10407 TLNIRQAYN True H1975_Epitope_Rep3 1091.5723568347898 1091.5712499358601 45.088 2 -0.5013672605172064 0.14321089558398678 0.9519929420670282 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1'] 38445 4480 HENNNGQAAF True NCI_RA007_Epitope_Rep5 1100.4635346618 1100.4624299358602 23.883 2 -0.5013744937383534 0.14322503961965136 0.951996403315173 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 61816 8096 LLASGVHL True PC9_epitope_Rep1 808.48068829608 808.47958993586 35.967 2 -0.5013984000242344 0.143250961554334 0.952007841296819 ['ENST00000267970.8_1_15:77338989-77339115:-|nuORF'] 97417 8986 SEEATREP True H1975_Epitope_Rep2 917.4090394774499 917.40794993586 39.519 2 -0.5014032550991846 0.143250961554334 0.9520101638965629 ['nc|ENSG00000133619|A5PL33-3|KRBA1', 'nc|ENSG00000133619|A5PL33-2|KRBA1', 'nc|ENSG00000133619|A5PL33|KRBA1', 'ENSG00000133619|ENST00000496259|KRBA1'] 22633 9573 ETNFPEPP True H1975_Epitope_Rep2 929.4130622287298 929.41196993586 41.797 2 -0.5014372006015709 0.143250961554334 0.9520263999795742 ['nc|ENSG00000156738|P11836-2|MS4A1', 'ENSG00000156738|ENST00000345732|MS4A1'] 80075 14616 PFLGAPAAT True PC9_epitope_Rep1 843.44905381463 843.44850496793 61.043 1 -0.5014662732683541 0.14326510399471773 0.9520403012622118 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant'] 28071 22149 FQTDVGFGL True PC9_epitope_Rep5 982.4759968384599 982.47488993586 90.233 2 -0.5014958135458455 0.14326742151652197 0.9520544222320277 ['ENSG00000167131|ENST00000417826|CCDC103'] 33929 6542 GLRPEERLIR True NCI_RA007_Epitope_Rep3 1237.72550343125 1237.72384490379 32.778 3 -0.5015068580263395 0.14326742151652197 0.9520597007511123 ['ENSG00000170881|ENST00000303545|RNF139'] 29175 15367 FTQNSQLTL True PC9_epitope_Rep5 1050.5345743437401 1050.53346993586 64.119 2 -0.5015099867993679 0.14326742151652197 0.9520611959942541 ['nc|ENSG00000197050|Q8TAQ5-2|ZNF420', 'ENSG00000197050|ENST00000337995|ZNF420'] 125891 7068 VLASQLRPP True H1975_Epitope_Rep3 979.5814649665099 979.58036993586 32.154 2 -0.5015388888266463 0.14326742151652197 0.9520750062085915 ['ENST00000509792.1_1_4:176987041-176989385:+|nuORF'] 127213 16027 VLVSVGLLGL True PC9_epitope_Rep4 968.6270181765998 968.62592993586 69.58 2 -0.5015480700210472 0.14326742151652197 0.95207939245703 ['ENST00000225964.9_1_17:48274384-48275320:-|nuORF'] 1686 6971 AEGFEGTLC True NCI_RA007_Epitope_Rep3 925.3851332287298 925.38402993586 34.528 2 -0.5016680663820501 0.14326742151652197 0.952136684875555 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant', 'NOTCH3|p.C608Afs*8|1|0.71|ENSG00000074181|chr19:15187124-15187124|G/-|frameshift_variant', 'ENSG00000074181|ENST00000263388|NOTCH3'] 71002 20140 LYIGWDKHYGF True PC9_epitope_Rep3 1397.67682190333 1397.67572993586 82.722 2 -0.5016723266622366 0.14328156205126513 0.9521387177575931 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 100070 19473 SIRRVYTRL True H1975_Epitope_Rep2 1162.69347502698 1162.69183490379 80.808 3 -0.5018392794549703 0.14337349397590363 0.9522183182735985 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 72756 6874 MNQVLHLIR True NCI_RA007_Epitope_Rep3 1122.6331832695398 1122.6315449037902 34.148 3 -0.5018534008246982 0.14337349397590363 0.9522250453527917 ['ENST00000519966.5_1_8:87492545-87498738:-|nuORF'] 141360 9414 YTDYDDYPP True H1975_Epitope_Rep2 1147.43458551895 1147.43348993586 41.178 2 -0.501865222097936 0.14337349397590363 0.9522306760291855 ['ENSG00000179954|ENST00000389623|SSC5D', 'nc|ENSG00000179954|A1L4H1-2|SSC5D'] 80507 10583 PGNVRNIIQHF True PC9_epitope_Rep4 1293.6942033029698 1293.69256490379 48.448 3 -0.5019611458236384 0.14342064002904722 0.9522763428155778 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 57628 9715 LEEEEEEDP True PC9_epitope_Rep2 1117.4298940613298 1117.42878993586 42.706 2 -0.5019922309161102 0.14344654586262667 0.9522911327011161 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 102031 13021 SLQTGVGEL True PC9_epitope_Rep4 902.4709114580199 902.4703649679301 57.98 1 -0.501995741490377 0.14344654586262667 0.9522928027126654 ['nc|ENSG00000075651|Q13393-4|PLD1', 'nc|ENSG00000075651|Q13393-2|PLD1', 'ENSG00000075651|ENST00000351298|PLD1'] 120872 5404 VEMYDLRWDRW True H1975_Epitope_Rep3 1567.7241831019098 1567.7225249037901 25.848 3 -0.5020080731531484 0.14344654586262667 0.9522986685535101 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 120088 7069 VDVLYNEEKQK True NCI_RA007_Epitope_Rep2 1363.69834519355 1363.69724993586 32.121 2 -0.5020930842028483 0.14349368759798664 0.9523390873306714 ['STK11-HMHA1|1|fusion', 'STK11|p.L282Afs*3|2|0.54|ENSG00000118046|chr19:1221314-1221315|-/C|frameshift_variant', 'ENSG00000118046|ENST00000326873|STK11', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'STK11|p.D284Efs*5|1|0.57|ENSG00000118046|chr19:1221326-1221333|CTGACCTG/-|frameshift_variant', 'STK11|p.P281Rfs*6|1|0.7|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'STK11|p.N259Kfs*28|1|0.77|ENSG00000118046|chr19:1221255-1221255|C/-|frameshift_variant', 'STK11|p.T250Rfs*37|1|0.54|ENSG00000118046|chr19:1221227-1221227|C/-|frameshift_variant', 'STK11|p.D176Tfs*111|1|0.54|ENSG00000118046|chr19:1220433-1220433|G/-|frameshift_variant', 'STK11|p.H168Lfs*119|1|0.44|ENSG00000118046|chr19:1220411-1220411|A/-|frameshift_variant', 'STK11|p.E265Gfs*19|1|0.52|ENSG00000118046|chr19:1221271-1221280|GAGAACATCG/-|frameshift_variant', 'ENST00000586358.5_1_19:1207098-1220516:+|nuORF', 'STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 5855 18483 APFPEAAL True PC9_epitope_Rep4 814.4225047136199 814.4219549679301 79.166 1 -0.502122180792235 0.143519588105218 0.9523529138952906 ['nc|ENSG00000177030|O75398-5|DEAF1', 'nc|ENSG00000177030|O75398-4|DEAF1', 'nc|ENSG00000177030|O75398-3|DEAF1', 'ENSG00000177030|ENST00000382409|DEAF1'] 4708 6854 ALCFRWLRPEI True NCI_RA007_Epitope_Rep5 1402.7543610313799 1402.7527049037901 33.047 3 -0.5021455089114082 0.143519588105218 0.9523639965455891 ['ZSCAN20|p.C77F|1|0.1|ENSG00000121903|chr1:33479518-33479518|G/T|missense_variant'] 46116 13647 ISIPAVQKV True PC9_epitope_Rep4 953.5909670210499 953.58986993586 60.385 2 -0.5021667720815831 0.143519588105218 0.9523740960432797 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 13839 11296 DQLSKLKDER True H1975_Epitope_Rep1 1230.65681473474 1230.6557099358602 48.427 2 -0.5022232249473686 0.14353372167857556 0.9524008998878468 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 46999 8840 ITQNRQDL True PC9_epitope_Rep1 986.5145076054998 986.51340993586 38.845 2 -0.5022462066818938 0.143545486048085 0.9524118074979365 ['nc|ENSG00000128276|O75679-2|RFPL3', 'ENSG00000128276|ENST00000249007|RFPL3', 'ENSG00000128250|ENST00000354373|RFPL1'] 135579 8732 WKYPDRTLLKI True NCI_RA007_Epitope_Rep5 1431.8238204901897 1431.82216490379 40.254 3 -0.5022502821012652 0.143545486048085 0.9524137415275705 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 73757 8396 NAEIEPDDY True H1975_Epitope_Rep1 1064.42983449168 1064.42872993586 37.223 2 -0.5022890026031314 0.14355961849443913 0.9524321129688006 ['nc|ENSG00000157036|Q9Y2C4-3|EXOG', 'nc|ENSG00000157036|Q9Y2C4-4|EXOG', 'ENSG00000157036|ENST00000287675|EXOG'] 58165 18793 LEKRVKELAQ True PC9_epitope_Rep1 1212.7190210684798 1212.7179299358602 77.073 2 -0.5023028290898743 0.14357138142696851 0.9524386714806954 ['UBN1|p.Q794Kfs*51|1|0.07|ENSG00000118900|chr16:4874784-4874784|G/-|frameshift_variant', 'nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1', 'ENST00000585857.1_1_16:4910827-4920335:+|nuORF'] 47064 14375 ITSLEHLGDDF True PC9_epitope_Rep1 1245.58773211541 1245.5866299358602 60.118 2 -0.5023169791301882 0.14357138142696851 0.9524453825730318 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'ENST00000309900.11_1_16:70928350-70955090:-|nuORF'] 49867 18797 KIEVLEQEL True PC9_epitope_Rep3 1099.61249031127 1099.6113899358602 77.526 2 -0.5024282962811584 0.14363501361273823 0.9524981465681931 ['DSP|p.E1039Q|1|0.93|ENSG00000096696|chr6:7579305-7579305|G/C|missense_variant'] 84017 11634 PVTKMSHP True PC9_epitope_Rep3 895.4585729525099 895.45746993586 49.766 2 -0.5024558395656968 0.14366564366564366 0.9525111933496304 ['ENST00000532896.5_1_19:18304624-18307257:+|nuORF'] 141610 11833 YTRQERYRARP True PC9_epitope_Rep1 1494.7803925384198 1494.77875490379 50.381 3 -0.5027435195022286 0.14379527117329682 0.952647257139512 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 106216 6978 STDYHISL True H1975_Epitope_Rep2 934.43961132974 934.43850993586 31.762 2 -0.5027782172051598 0.14382589757127773 0.9526636427596153 ['ENST00000513131.1_1_5:38462968-38464085:+|nuORF', 'nc|ENSG00000164318|Q63HQ2-5|EGFLAM', 'nc|ENSG00000164318|Q63HQ2-3|EGFLAM', 'nc|ENSG00000164318|Q63HQ2-4|EGFLAM', 'ENSG00000164318|ENST00000322350|EGFLAM', 'nc|ENSG00000164318|Q63HQ2|EGFLAM'] 63160 11605 LLRPDASVT True PC9_epitope_Rep2 970.54474510462 970.54364993586 49.964 2 -0.5028365978449861 0.14383765055271408 0.9526912000834814 ['ENST00000304271.10_2_11:68031188-68039337:-|nuORF'] 64649 9012 LPTTNSGVSA True PC9_epitope_Rep1 945.47672511445 945.4761749679301 39.512 1 -0.5028379164608386 0.14383765055271408 0.9526918223293398 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 692 5318 AAVAPAPAP True H1975_Epitope_Rep3 763.42283906679 763.42174993586 25.531 2 -0.5028755564212968 0.14385177608024946 0.9527095810479818 ['ENSG00000121671|ENST00000616080|CRY2'] 67076 5269 LSQEAERCKEE True NCI_RA007_Epitope_Rep2 1320.5979795292799 1320.5968899358602 25.117 2 -0.5029514434257062 0.14386115418880127 0.9527453653857609 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 18551 19032 EKLQETKEKV True NCI_RA007_Epitope_Rep3 1230.68196685342 1230.68032490379 83.145 3 -0.5029897112577255 0.14386115418880127 0.952763400596654 ['ENSG00000177150|ENST00000651643|FAM210A'] 124398 21214 VGVDEEIVYAK True H1975_Epitope_Rep1 1220.6288686513997 1220.6277699358602 88.138 2 -0.5029936518021596 0.14386115418880127 0.9527652573559942 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.S138Kfs*9|1|0.03|ENSG00000092201|chr14:21370403-21370406|TTGC/-|frameshift_variant', 'SUPT16H|p.D140Vfs*9|1|0.04|ENSG00000092201|chr14:21370400-21370401|-/CA|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 101874 20795 SLPMVTPDA True PC9_epitope_Rep3 929.4528188657299 929.45172993586 85.259 2 -0.5030191157149599 0.14389177596304545 0.9527772540972048 ['ENST00000480317.1_1_X:47487885-47489273:-|nuORF'] 15823 8216 EDEEWKRLRS True PC9_epitope_Rep2 1346.6578773638998 1346.6567899358602 36.96 2 -0.503048909723266 0.14390589943249307 0.952791287147828 ['ENSG00000160868|ENST00000651514|CYP3A4'] 129304 6646 VQWDCASPDP True H1975_Epitope_Rep3 1116.4546097708799 1116.4535099358602 30.519 2 -0.5030724477043159 0.1439365194582378 0.9528023707642249 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 110696 12432 TGDTIALNIIK True NCI_RA007_Epitope_Rep2 1157.66558851329 1157.66448993586 52.967 2 -0.5031640226885756 0.14396476352298784 0.9528454680825765 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 22332 10588 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.4967499358602 45.796 2 -0.5031923815827946 0.14396476352298784 0.9528588068044807 ['ENSG00000150787|ENST00000280362|PTS'] 78849 19296 PAEPAFLA True PC9_epitope_Rep2 814.4225047136199 814.4219549679301 79.596 1 -0.5033323695567165 0.1440118772682283 0.9529245980431651 ['ENSG00000163807|ENST00000296121|KIAA1143'] 45173 11480 IPQDALPP True H1975_Epitope_Rep1 849.45961849833 849.45852993586 49.141 2 -0.5033736006801048 0.14402362178746989 0.9529439591087316 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 103132 6165 SPHPPSEVTA True PC9_epitope_Rep5 1020.48762415132 1020.48652993586 28.697 2 -0.5034021222080457 0.14402362178746989 0.9529573476603974 ['MKRN2|p.F339Ifs*20|1|0.28|ENSG00000075975|chr3:12581849-12581850|-/C|frameshift_variant', 'nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 89646 5318 QYTPHSHQF True PC9_epitope_Rep3 1143.50975657823 1143.50812490379 25.533 3 -0.5034186084564738 0.14403774145126438 0.9529650849758402 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR'] 121056 18563 VEQRDSLVAL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 76.754 2 -0.5034768045323798 0.14405186064924783 0.9529923878983574 ['ENSG00000243156|ENST00000441493|MICAL3', 'ENST00000252134.11_1_22:18273500-18274125:-|nuORF'] 85526 14382 QGAGSVLF True PC9_epitope_Rep6 777.40210362221 777.4015549679301 67.218 1 -0.5034925147851783 0.14406122684612466 0.9529997558596257 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 40811 10084 HSDFQTLIS True PC9_epitope_Rep1 1046.50327421546 1046.5021699358601 43.658 2 -0.5034997754765 0.14406122684612466 0.9530031606875377 ['ENSG00000242550|ENST00000238508|SERPINB10'] 119916 14088 VDLESLEI True PC9_epitope_Rep3 916.4753281321199 916.47422993586 59.274 2 -0.5035271180112237 0.14406122684612466 0.9530159806059136 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'VPS13B|p.I2411Rfs*23|1|0.19|ENSG00000132549|chr8:99766880-99766893|TCAATCTCGTGAAT/-|frameshift_variant', 'nc|ENSG00000132549|Q7Z7G8-3|VPS13B'] 130006 9075 VSAAQPLSP True H1975_Epitope_Rep2 868.4654321547599 868.46432993586 39.859 2 -0.5035553058612997 0.14408708560118752 0.9530291934120904 ['ENST00000262848.5_1_X:3631394-3631646:-|nuORF'] 123176 16517 VGLAELTSV True PC9_epitope_Rep6 887.49639792987 887.49530993586 75.968 2 -0.5035689522185152 0.14408708560118752 0.9530355887649049 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1', 'LUZP1|p.Q825H|1|0.4|ENSG00000169641|chr1:23091787-23091787|C/A|missense_variant'] 34791 8389 GQGQETSGPP True H1975_Epitope_Rep2 956.4199385143198 956.41884993586 37.221 2 -0.5036464834548411 0.14408708560118752 0.953071908174771 ['ENSG00000027847|ENST00000029410|B4GALT7'] 42238 6345 IDSRVQEY True PC9_epitope_Rep6 1008.4876241513198 1008.48652993586 32.979 2 -0.503701542485277 0.14414830452566302 0.9530976845045733 ['ENSG00000149346|ENST00000334534|SLX4IP'] 116163 15175 TSTTTWLLY True H1975_Epitope_Rep2 1084.54407639828 1084.5429699358601 63.526 2 -0.5037052830428975 0.14414830452566302 0.9530994351957325 ['chr19:282809-287665|110|11.38|0.22|5.69|-|1|PLPP2,None|1'] 9397 11254 AVSWGDAP True PC9_epitope_Rep1 801.36571811349 801.36462993586 48.168 2 -0.5039223780774701 0.14427786848745733 0.9532009376628271 ['ENSG00000066735|ENST00000423312|KIF26A'] 133763 22442 VYELHVWLL True PC9_epitope_Rep1 1170.6437308698999 1170.6426299358602 91.145 2 -0.5039966430589476 0.14430133416890678 0.9532356132499566 ['ENSG00000188505|ENST00000339852|NCCRP1'] 36683 7650 GVIQNFKRTLS True H1975_Epitope_Rep1 1261.7142700412098 1261.7131699358602 34.404 2 -0.5040250524230411 0.14430133416890678 0.9532488717776277 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 129783 24741 VRRHLGPT True NCI_RA007_Epitope_Rep5 934.5460825172999 934.54553496793 102.65 1 -0.5040296132034123 0.14430133416890678 0.9532509999505047 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF', 'ENST00000484411.1_1_10:77163655-77167299:+|nuORF', 'ENST00000425916.4_1_10:77163018-77167299:+|nuORF'] 33042 5784 GIKVGDDKCFL True NCI_RA007_Epitope_Rep3 1193.6114447654497 1193.60980490379 29.73 3 -0.5040631931426603 0.14430133416890678 0.9532666664266929 ['ENSG00000197892|ENST00000524189|KIF13B'] 63550 6627 LMDGLTAK True PC9_epitope_Rep5 847.44733956247 847.44624993586 30.464 2 -0.5041989752939512 0.1443625389600752 0.9533299652989107 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 56029 20149 LASNVIC[Carbamidomethyl]P True PC9_epitope_Rep3 872.44258881463 872.44203496793 82.757 1 -0.504203828440823 0.1443625389600752 0.953332226278007 ['ENSG00000174914|ENST00000642097|OR9G1'] 116164 15271 TSTTTWLLY True H1975_Epitope_Rep2 1084.54407639828 1084.5429699358601 63.898 2 -0.504267451250055 0.14440963060686016 0.9533618575249797 ['chr19:282809-287665|110|11.38|0.22|5.69|-|1|PLPP2,None|1'] 70707 17885 LWQFIRQWPPG True NCI_RA007_Epitope_Rep5 1426.7509899030997 1426.7498899358602 75.589 2 -0.5043368739690745 0.14444719267870393 0.9533941703475 ['nc|ENSG00000137868|Q9BX79-5|STRA6'] 137871 6941 YETLKNWWLQQ True NCI_RA007_Epitope_Rep1 1507.74596409231 1507.7443049037902 31.003 3 -0.5043503069434929 0.14444719267870393 0.9534004203686828 ['nc|ENSG00000125648|Q9BV35-4|SLC25A23', 'nc|ENSG00000125648|Q9BV35-2|SLC25A23', 'ENSG00000125648|ENST00000301454|SLC25A23', 'nc|ENSG00000125648|Q9BV35-3|SLC25A23'] 15427 9731 EALATLPSSP True H1975_Epitope_Rep1 984.51277627 984.51166993586 42.357 2 -0.5043649094529686 0.14444719267870393 0.9534072136780176 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 58761 11259 LESEWCLIPTV True H1975_Epitope_Rep2 1288.6373251601199 1288.63622993586 48.352 2 -0.5043686397005147 0.14444719267870393 0.9534089489011591 ['ENST00000439384.5_3_7:29186332-29186525:+|nuORF'] 82647 5135 PQLSEAEVER True NCI_RA007_Epitope_Rep1 1156.5724164044398 1156.5707849037901 24.057 3 -0.5043813781707154 0.14444719267870393 0.9534148740932338 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8'] 110449 16276 TFDFKGVIDY True H1975_Epitope_Rep2 1203.5811901829898 1203.58008993586 67.819 2 -0.5043934242073653 0.14445653607703468 0.9534204765745402 ['ENSG00000138767|ENST00000504123|CNOT6L'] 134959 16472 WARWLWRRLFK True PC9_epitope_Rep4 1616.9204552700396 1616.9188049037903 71.332 3 -0.5044012291206073 0.14445653607703468 0.9534241062278885 ['ENST00000491791.1_1_3:49377935-49378118:-|nuORF'] 56528 11704 LDGAGLMGFVP True PC9_epitope_Rep1 1075.53721719603 1075.5361099358602 49.894 2 -0.5044300908323825 0.14445653607703468 0.9534375260531327 ['ENSG00000197859|ENST00000651351|ADAMTSL2'] 7456 8289 ASAPGYLAITK True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 39.726 2 -0.5044545492942465 0.14446826051112943 0.9534488957496486 ['nc|ENSG00000109472|P16870-2|CPE', 'ENSG00000109472|ENST00000402744|CPE'] 117339 10068 TVNWYQQLP True H1975_Epitope_Rep2 1147.56620882519 1147.5651099358602 43.719 2 -0.5044703408992882 0.14446826051112943 0.9534562352548637 ['nc|ENSG00000211651|P01699|IGLV1-44'] 20416 17148 EPEEDEDCYI True PC9_epitope_Rep5 1240.4441642264799 1240.4430699358602 70.981 2 -0.5045680865668972 0.14449885409968508 0.9535016414382197 ['ENSG00000147174|ENST00000373696|GCNA'] 19891 18324 ELTQQLNTLFQ True PC9_epitope_Rep2 1333.68778050985 1333.6866899358602 75.813 2 -0.5045875185051721 0.14450819401853135 0.953510663458863 ['CON__Q32PJ2'] 38984 15185 HHLIVITSL True PC9_epitope_Rep4 1031.6127650947901 1031.6116699358602 66.333 2 -0.5045920110644616 0.14450819401853135 0.9535127490764292 ['nc|ENSG00000133318|O95197-5|RTN3'] 111646 4508 TIDWRDIVR True NCI_RA007_Epitope_Rep4 1172.6302060640799 1172.62855490379 23.731 3 -0.5046263633862326 0.14450819401853135 0.9535286939460829 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'ERBB3|p.R170P|1|0.17|ENSG00000065361|chr12:56086618-56086618|G/C|missense_variant', 'ENST00000549472.1_1_12:56480319-56481575:+|nuORF'] 19232 9553 ELIRWEEGK True H1975_Epitope_Rep3 1158.6033226099 1158.6022299358601 41.754 2 -0.504819156724428 0.14458824499216882 0.953618089119798 ['ENSG00000198707|ENST00000552810|CEP290'] 86434 5601 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 29.606 3 -0.5048244419998249 0.1446023476655236 0.9536205376454563 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 63978 12633 LNVKRHVHP True PC9_epitope_Rep2 1098.6410455312998 1098.6399499358602 53.903 2 -0.5048409477273743 0.1446116816960385 0.9536281835608382 ['SPRR4|p.P31Lfs*79|1|0.32|ENSG00000184148|chr1:152971978-152971978|C/-|frameshift_variant'] 55921 10901 LAQYYKVLVD True PC9_epitope_Rep6 1210.65977485686 1210.6586699358602 52.795 2 -0.5048493387496368 0.1446116816960385 0.9536320700858598 ['ENSG00000167971|ENST00000343516|CASKIN1'] 54185 16338 KVTLPVNER True PC9_epitope_Rep5 1054.61349337078 1054.6123899358602 67.841 2 -0.5048644328452377 0.1446116816960385 0.953639060585711 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3'] 101527 7823 SLLFFSLPSP True H1975_Epitope_Rep3 1106.60119735158 1106.60010993586 35.07 2 -0.5049241467086517 0.14462578305308277 0.953666706545531 ['ENST00000531381.1_1_11:121972385-121972643:-|nuORF', 'ENST00000340957.9_1_3:184063152-184063416:+|nuORF'] 3241 9382 AGEVAKEWQEL True PC9_epitope_Rep5 1258.6193665968597 1258.61826993586 41.042 2 -0.5050548791210083 0.14470582417038955 0.9537271810958703 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF'] 78976 5784 PAISTNKT True PC9_epitope_Rep1 830.44978209062 830.44868993586 27.064 2 -0.505141053960539 0.14471753787316816 0.9537670058702246 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 25245 8930 FDIQLLTHN True NCI_RA007_Epitope_Rep2 1099.56620882519 1099.5651099358602 39.36 2 -0.505181653144668 0.14471753787316816 0.9537857578702579 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 14861 22899 DVYIYKPPVS True PC9_epitope_Rep1 1179.6175756917098 1179.61646993586 92.879 2 -0.5052831574607699 0.1447763162232552 0.9538326115636693 ['nc|ENSG00000162643|Q8IWG1-2|DNAI3', 'ENSG00000162643|ENST00000294664|DNAI3'] 84021 13761 PVTPVVTP True PC9_epitope_Rep6 808.46945490604 808.46890496793 64.731 1 -0.5052865430459976 0.1447763162232552 0.9538341736083903 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 141187 17541 YSVINRSPHYL True PC9_epitope_Rep2 1347.69353459663 1347.69187490379 72.739 3 -0.5052873955411972 0.1447763162232552 0.9538345669261912 ['nc|ENSG00000144278|Q8IUC8-2|GALNT13', 'ENSG00000144278|ENST00000392825|GALNT13', 'nc|ENSG00000144278|Q8IUC8-3|GALNT13', 'GALNT13|p.G257Vfs*6|1|0.3|ENSG00000144278|chr2:154245891-154245891|G/-|frameshift_variant'] 142938 9191 YYYRRRHRHER True NCI_RA007_Epitope_Rep1 1690.8665222042198 1690.8654299358602 39.752 2 -0.5052993841897131 0.1447904132394877 0.9538400978477066 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 41326 16488 HVWQCGGSL True PC9_epitope_Rep5 985.4439855175299 985.44288993586 68.42 2 -0.505351252009966 0.1448045097909936 0.953864020211213 ['GALNT2|p.R341H|1|0.13|ENSG00000143641|chr1:230255230-230255230|G/A|missense_variant'] 59531 21409 LFSFFTRFCFP True PC9_epitope_Rep2 1410.6794647556198 1410.67836993586 87.821 2 -0.505381437801492 0.1448186058777959 0.9538779374522962 ['ENST00000367388.4_1_1:197886553-197886649:+|nuORF'] 97377 6845 SEDPRNQRLSK True H1975_Epitope_Rep3 1328.6796754376398 1328.6785699358602 31.287 2 -0.5054082310429581 0.1448327014999176 0.953890287482734 ['nc|ENSG00000204624|Q9P2K9-2|DISP3', 'ENSG00000204624|ENST00000294484|DISP3'] 135260 9700 WFREFWEQRFR True H1975_Epitope_Rep1 1685.82152907441 1685.8204299358601 42.236 2 -0.5055277760782007 0.1448725978178462 0.9539453553374062 ['ENSG00000164082|ENST00000395052|GRM2'] 11521 19620 DFLKLCPKLQL True NCI_RA007_Epitope_Rep4 1316.75262969588 1316.7509849037901 84.781 3 -0.5055339627422971 0.1448725978178462 0.9539482036416531 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 61892 5240 LLDDQEAKR True NCI_RA007_Epitope_Rep2 1086.5669371011797 1086.5658499358601 25.003 2 -0.5055356306804495 0.1448725978178462 0.9539489715245967 ['ENSG00000168259|ENST00000457167|DNAJC7', 'ENST00000316603.11_1_17:40149247-40169434:-|nuORF'] 112676 15445 TLFWRSRV True PC9_epitope_Rep2 1063.59269835655 1063.59160993586 64.686 2 -0.5055436726535707 0.1448725978178462 0.9539526737209646 ['ENST00000592915.1_1_17:42084599-42085966:+|nuORF', 'ENSG00000161653|ENST00000293404|NAGS'] 103302 17358 SPLRPTLLI True PC9_epitope_Rep6 1008.6331661861999 1008.63206993586 79.383 2 -0.5056192219301324 0.1449172654756411 0.9539874409661094 ['ENST00000358888.7_1_12:56511327-56511564:+|nuORF'] 110873 7887 TGSEPPKAKDP True H1975_Epitope_Rep1 1125.56660274801 1125.56550993586 35.289 2 -0.5056378060125866 0.1449172654756411 0.9539959897571076 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'ENST00000527328.5_1_8:145537548-145537990:+|nuORF'] 127230 13993 VLWKLLDP True PC9_epitope_Rep2 982.5851533646198 982.58404993586 59.095 2 -0.5057017301050857 0.1449478385549714 0.9540253847874327 ['ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF'] 135661 10535 WLNGRMPKRW True PC9_epitope_Rep1 1342.7080795452998 1342.70644490379 45.414 3 -0.5060604562780912 0.14505842218889567 0.9541900446306656 ['ENST00000502841.5_1_4:40829169-40832532:-|nuORF'] 142214 21925 YWELIYEDSMD True PC9_epitope_Rep5 1462.59624819378 1462.59514993586 89.376 2 -0.5060722901142428 0.14505842218889567 0.9541954679653099 ['ENST00000546621.5_1_12:56668606-56679804:-|nuORF', 'ENSG00000062485|ENST00000351328|CS'] 121833 20742 VFPDLQEPWVP True PC9_epitope_Rep5 1325.6655885132898 1325.66448993586 84.843 2 -0.5061695340248246 0.1450982977110558 0.9542400134297047 ['COL5A1|p.A436Rfs*122|1|0.08|ENSG00000130635|chr9:134731636-134731636|G/-|frameshift_variant'] 83285 16561 PTDATGFIN True PC9_epitope_Rep5 934.4396113297399 934.4390649679301 68.707 1 -0.5062577437640979 0.1450982977110558 0.9542803890279261 ['ENSG00000130707|ENST00000352480|ASS1', 'ENST00000372386.6_1_9:133355254-133376405:+|nuORF'] 65458 5226 LRKCLRKAKK True PC9_epitope_Rep4 1242.80706531058 1242.80596993586 26.802 2 -0.5062591125206879 0.1450982977110558 0.9542810153036071 ['ENSG00000007908|ENST00000333360|SELE'] 99967 5303 SIPDHQVP True NCI_RA007_Epitope_Rep1 891.44503106335 891.44392993586 24.708 2 -0.5062729315980931 0.1450982977110558 0.9542873378316797 ['ENST00000487162.1_1_22:50966877-50967150:-|nuORF'] 89040 15598 QVLGLPWS True PC9_epitope_Rep4 898.49125297978 898.49070496793 67.917 1 -0.506319145131287 0.14512647276921808 0.9543084762199838 ['ENST00000421367.6_1_10:101910840-101911047:-|nuORF'] 46360 7688 ISRKTLDEL True PC9_epitope_Rep2 1073.60807363717 1073.6069699358602 34.94 2 -0.5063210895310355 0.14512647276921808 0.9543093654229045 ['ENSG00000261150|ENST00000615648|EPPK1'] 65871 7870 LSDMEYRLK True H1975_Epitope_Rep3 1153.58014463717 1153.5790499358602 35.248 2 -0.5064734432078293 0.14515464597030667 0.9543789942752717 ['ENSG00000124429|ENST00000262753|POF1B', 'nc|ENSG00000124429|Q8WVV4-1|POF1B'] 77485 10871 NTAVMQRLAPK True NCI_RA007_Epitope_Rep2 1227.67577635751 1227.67466993586 46.892 2 -0.506487271088813 0.14515464597030667 0.9543853095485983 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant', 'LAMA1|p.H607Afs*3|1|0.16|ENSG00000101680|chr18:7036008-7036009|-/A|frameshift_variant'] 27404 16216 FLWHNMKLPVP True H1975_Epitope_Rep2 1380.73764833808 1380.73654993586 67.584 2 -0.5064976340290342 0.145163947932114 0.9543900418892528 ['ENSG00000183751|ENST00000568546|TBL3'] 105985 17905 SSTKVKNKSKK True NCI_RA007_Epitope_Rep4 1233.74048478905 1233.73882490379 77.493 3 -0.5065172283180998 0.145163947932114 0.9543989887086577 ['TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 135385 9704 WGWWRWWEHRL True NCI_RA007_Epitope_Rep2 1696.81638412432 1696.8152899358602 42.366 2 -0.5065212430795779 0.145163947932114 0.9544008216834616 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 55422 9487 LAFCCYTSVL True PC9_epitope_Rep5 1118.5140392233 1118.5129499358602 41.448 2 -0.5065960422918995 0.1451732489743463 0.9544349608106097 ['ENSG00000241697|ENST00000374879|TMEFF1'] 20585 17009 EPSLASTLG True PC9_epitope_Rep3 873.44436235701 873.44381496793 70.582 1 -0.5066265269517393 0.1451732489743463 0.9544488682835424 ['ENST00000498004.5_1_X:15768244-15782785:+|nuORF'] 142321 15926 YYEDNKQFF True PC9_epitope_Rep5 1252.540053647 1252.53894993586 66.25 2 -0.5066281412181689 0.1451732489743463 0.9544496046342508 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 23051 19461 EVHLKFLL True PC9_epitope_Rep5 997.5960524014898 997.59494993586 79.909 2 -0.5067165577161599 0.14518494109893731 0.954489921076358 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11'] 90513 5888 RELPPPPPP True H1975_Epitope_Rep2 998.5549158654999 998.55380993586 27.634 2 -0.5067354128244386 0.14518494109893731 0.9544985149086969 ['ESPN|p.K847Efs*7|1|0.25|ENSG00000187017|chr1:6460117-6460118|-/T|frameshift_variant', 'ENSG00000187017|ENST00000645284|ESPN', 'nc|ENSG00000187017|B1AK53-2|ESPN'] 121171 13496 VESEDDPV True PC9_epitope_Rep6 888.3712569863999 888.37014993586 63.62 2 -0.5067552691672806 0.14519902464742324 0.9545075636528935 ['nc|ENSG00000205111|Q5MAI5-2|CDKL4', 'ENSG00000205111|ENST00000699627|CDKL4', 'nc|ENSG00000205111|Q5MAI5|CDKL4'] 100683 10262 SLDNDECSTHS True H1975_Epitope_Rep3 1206.44589556198 1206.4447899358602 44.522 2 -0.5067847132130314 0.14520593080724875 0.954520978910405 ['ENSG00000139618|ENST00000380152|BRCA2'] 22643 5633 ETNVAEGRRVF True H1975_Epitope_Rep3 1276.6523980606396 1276.6513099358601 26.704 2 -0.5067936631247131 0.14520593080724875 0.954525056018117 ['ENSG00000101825|ENST00000217939|MXRA5'] 100487 8580 SLAQQLEKHQL True H1975_Epitope_Rep1 1293.70409928033 1293.70300993586 37.929 2 -0.5068174209712726 0.14520593080724875 0.9545358773959083 ['ENSG00000070371|ENST00000427926|CLTCL1'] 74898 5909 NHHQKRMHQFL True NCI_RA007_Epitope_Rep2 1474.73641955146 1474.7353299358601 27.601 2 -0.5068238990192021 0.14520593080724875 0.9545388276954121 ['NBEA|p.A427Qfs*50|1|0.29|ENSG00000172915|chr13:35069946-35069946|G/-|frameshift_variant'] 94949 24844 RTKIKFALK True NCI_RA007_Epitope_Rep5 1103.7178988696699 1103.71737496793 103.05 1 -0.5069448490168611 0.14523648704304706 0.9545938834554037 ['NAV3|p.D474Tfs*18|1|0.58|ENSG00000067798|chr12:78006956-78006956|G/-|frameshift_variant'] 87374 13590 QPTEPQPVLI True PC9_epitope_Rep5 1120.6128246644398 1120.61172993586 57.297 2 -0.5070172015720773 0.145245782814971 0.9546267921351215 ['ENSG00000065613|ENST00000369755|SLK', 'nc|ENSG00000065613|Q9H2G2-2|SLK'] 52366 3719 KKKRKKKRLVI True PC9_epitope_Rep3 1424.0191066821499 1424.0180099358602 19.41 2 -0.507028190689088 0.145245782814971 0.9546317887186468 ['TTLL6|p.A706Lfs*2|1|0.53|ENSG00000170703|chr17:48770022-48770022|C/-|frameshift_variant', 'nc|ENSG00000170703|Q8N841-3|TTLL6', 'ENSG00000170703|ENST00000393382|TTLL6'] 3702 15982 AGRRRRRRW True NCI_RA007_Epitope_Rep2 1268.7551212804397 1268.7540299358602 66.883 2 -0.5070488328129635 0.145245782814971 0.9546411731796048 ['ENST00000531211.1_1_8:70772071-70772629:-|nuORF'] 8801 7279 AVDRLCLGI True NCI_RA007_Epitope_Rep5 958.5269868654999 958.52588993586 34.676 2 -0.5071055366369298 0.14529041610384477 0.9546669442246066 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 94403 23887 RRRRLVFLWWP True PC9_epitope_Rep3 1583.9313543069097 1583.9296949037898 97.168 3 -0.5071205524146911 0.14529041610384477 0.9546737667045814 ['nc|ENSG00000187260|Q86TI4-4|WDR86'] 103831 10359 SPYHYRLDW True H1975_Epitope_Rep3 1235.5723568347898 1235.5712499358601 44.901 2 -0.5071595668380952 0.14530449536297296 0.9546914892237987 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 64420 24331 LPNLFSVIDYF True PC9_epitope_Rep1 1326.6859896046997 1326.6854749679298 98.418 1 -0.5072560445490369 0.14536559653428652 0.9547352909969311 ['ENSG00000035720|ENST00000265404|STAP1'] 81971 16959 PLTLSPAAPA True PC9_epitope_Rep5 936.5280324113198 936.52692993586 70.253 2 -0.5072772856797296 0.14536559653428652 0.9547449301347644 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 78058 12623 NVVCFTRHEPI True PC9_epitope_Rep4 1313.65504091293 1313.65394993586 56.393 2 -0.5073418898680985 0.14541022220026026 0.9547742372340505 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 102655 11792 SLYENKTILF True PC9_epitope_Rep5 1226.65468947642 1226.65303490379 50.355 3 -0.507370076639427 0.14541022220026026 0.9547870191921443 ['ENSG00000258817|ENST00000555099|OR4C13'] 57631 8842 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 38.963 2 -0.5074206998076547 0.14543837398909623 0.9548099682962067 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 60300 10027 LGSELVYHRR True NCI_RA007_Epitope_Rep1 1228.66765420196 1228.66654993586 43.009 2 -0.5074338557237421 0.14543837398909623 0.9548159307894892 ['ENST00000506026.1_1_5:33502626-33502971:+|nuORF'] 38887 13910 HHESGGPTSL True PC9_epitope_Rep3 1020.46247203264 1020.46136993586 58.586 2 -0.5074917837286452 0.14548299431771392 0.9548421774153903 ['ENST00000450633.6_1_3:127292132-127292357:-|nuORF'] 40880 4770 HSFSSATEI True NCI_RA007_Epitope_Rep3 977.44542498617 977.44432993586 25.726 2 -0.5075066303277397 0.14548299431771392 0.9548489023376896 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 95990 7627 RYLKYRTK True PC9_epitope_Rep3 1126.66111226954 1126.65946490379 34.334 3 -0.5075572992341142 0.14550843968711405 0.9548718474334307 ['ENSG00000196639|ENST00000431010|HRH1'] 130612 4613 VSSLQESGL True NCI_RA007_Epitope_Rep3 918.4658260775799 918.46472993586 25.06 2 -0.5075686136856551 0.14550843968711405 0.9548769698639316 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 136679 23099 WWWKLHFVWER True H1975_Epitope_Rep2 1671.84628727027 1671.84409987172 95.311 4 -0.5075740947087916 0.14550843968711405 0.954879451142793 ['ENSG00000168282|ENST00000305386|MGAT2'] 57369 8644 LEALAAHAIT True H1975_Epitope_Rep1 1008.5603951687601 1008.55928993586 38.178 2 -0.5075771135561769 0.14550843968711405 0.9548808177402737 ['nc|ENSG00000179057|Q8N9C0|IGSF22', 'ENSG00000179057|ENST00000513874|IGSF22'] 121759 22677 VFMGTIKLT True PC9_epitope_Rep2 1008.5677890483199 1008.56668993586 92.721 2 -0.5075853983426997 0.14550843968711405 0.954884568001547 ['ENSG00000126950|ENST00000372930|TMEM35A'] 89047 5658 QVLLREGV True PC9_epitope_Rep6 912.5392658013599 912.53816993586 29.867 2 -0.5076293622663988 0.14550843968711405 0.954904465007748 ['ENST00000265132.7_1_9:116823209-116823275:-|nuORF'] 60706 13748 LHPVSAIISL True PC9_epitope_Rep6 1048.62808080576 1048.6269899358601 64.676 2 -0.5076432368285709 0.14550843968711405 0.9549107428769136 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 15183 16906 EAAVQRKHNLY True NCI_RA007_Epitope_Rep1 1327.6996826062298 1327.6985899358601 69.888 2 -0.5076446430178885 0.14550843968711405 0.9549113791020444 ['ENSG00000136830|ENST00000373312|NIBAN2', 'nc|ENSG00000136830|Q96TA1-2|NIBAN2'] 55510 13095 LAGLSALPVS True PC9_epitope_Rep5 926.54368247546 926.54258993586 55.374 2 -0.5076883106405088 0.14550843968711405 0.9549311328776539 ['ENSG00000061455|ENST00000407847|PRDM6'] 13460 7476 DNEKKWDLIC True NCI_RA007_Epitope_Rep2 1262.5965229772999 1262.59542993586 33.708 2 -0.5076940272878094 0.14550843968711405 0.9549337183998277 ['nc|ENSG00000161791|Q8IVF7-2|FMNL3', 'ENSG00000161791|ENST00000335154|FMNL3', 'nc|ENSG00000161791|Q8IVF7|FMNL3', 'ENST00000550970.1_1_12:50055747-50062331:-|nuORF'] 58711 19741 LERRRVRCR True PC9_epitope_Rep3 1242.7203755644998 1242.7192699358602 81.161 2 -0.5077284767173289 0.1455341852193387 0.9549492967309052 ['ENST00000298532.2_1_9:139276772-139277807:-|nuORF'] 122512 15391 VGENKTEVP True PC9_epitope_Rep3 971.4923751785899 971.49126993586 64.356 2 -0.5077482706160413 0.1455341852193387 0.9549582458139063 ['ENSG00000132938|ENST00000612955|MTUS2'] 41177 11637 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep2 1121.48115925233 1121.48006993586 50.088 2 -0.5077694441546811 0.1455341852193387 0.9549678171258768 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 7590 8015 ASFERDDHGK True NCI_RA007_Epitope_Rep3 1160.52104953792 1160.51941490379 38.621 3 -0.507777089730867 0.1455623250452824 0.9549712728545108 ['nc|ENSG00000127124|Q5T1R4-2|HIVEP3', 'ENSG00000127124|ENST00000372583|HIVEP3'] 97120 11037 SDLHLLDMLTP True H1975_Epitope_Rep3 1253.6325741328499 1253.6314699358602 47.543 2 -0.5078117028521223 0.1455623250452824 0.9549869150954222 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant'] 116988 8646 TVGSNFSP True PC9_epitope_Rep1 807.37628279719 807.37518993586 38.095 2 -0.5078916750437156 0.14557639426322636 0.9550230398204033 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'ENST00000520923.5_1_8:101051146-101092499:-|nuORF'] 10274 16489 CCDCQDTTDEC True NCI_RA007_Epitope_Rep2 1234.3246604240999 1234.32301490379 68.866 3 -0.5079014799358438 0.14558327158969292 0.955027467312027 ['ENSG00000099139|ENST00000674117|PCSK5', 'nc|ENSG00000099139|Q92824|PCSK5'] 132157 14817 VTVNKLTL True PC9_epitope_Rep4 886.5487678559 886.54766993586 64.931 2 -0.5079019235035807 0.14558327158969292 0.9550276676013101 ['MAP3K11|p.A335T|1|0.22|ENSG00000173327|chr11:65607988-65607988|C/T|missense_variant'] 78038 9215 NVSVVDLTC[Carbamidomethyl]R True H1975_Epitope_Rep1 1161.58120754576 1161.58010993586 40.355 2 -0.5079115670429885 0.14558327158969292 0.9550320218911275 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 23263 12889 EVPENFFIDP True H1975_Epitope_Rep2 1205.5604547384098 1205.5593499358602 54.69 2 -0.5079539762627837 0.14558327158969292 0.9550511668342903 ['nc|ENSG00000159625|Q8IY82-2|DRC7', 'ENSG00000159625|ENST00000360716|DRC7'] 9348 4767 AVRTLQRFQS True NCI_RA007_Epitope_Rep4 1204.6676542019597 1204.66600490379 24.769 3 -0.5080926969620719 0.14566527279312502 0.9551137464823977 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 117734 7174 TVVELTGR True NCI_RA007_Epitope_Rep4 873.4919812557699 873.49088993586 34.218 2 -0.5080945848598615 0.14566527279312502 0.9551145976922827 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant'] 108770 14388 SYSQNLCLL True NCI_RA007_Epitope_Rep5 1039.5008316873098 1039.4997299358602 62.026 2 -0.5080950653858212 0.14566527279312502 0.9551148143484767 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 126530 22631 VLLLLLLLLLL True H1975_Epitope_Rep2 1247.9196183679899 1247.91852993586 93.49 2 -0.5080999561748303 0.14566527279312502 0.9551170194281244 ['PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF'] 77611 20193 NTEAAYFAYLL True PC9_epitope_Rep5 1274.6183039676998 1274.61720993586 82.718 2 -0.5081208691524581 0.14566527279312502 0.9551264474044595 ['F2R|p.T345N|1|0.26|ENSG00000181104|chr5:76733259-76733259|C/A|missense_variant'] 58780 19434 LESIATSDIP True PC9_epitope_Rep1 1044.5339056374 1044.53280993586 79.566 2 -0.5081374716688865 0.14566527279312502 0.955133931071109 ['ENSG00000140521|ENST00000268124|POLG', 'POLG|p.R1071C|1|0.26|ENSG00000140521|chr15:89318993-89318993|G/A|missense_variant'] 85091 15678 QEKRRMRP True PC9_epitope_Rep6 1099.60328012359 1099.60218993586 72.515 2 -0.5081571093603192 0.14566527279312502 0.9551427816367002 ['ENSG00000174502|ENST00000367135|SLC26A9', 'nc|ENSG00000174502|Q7LBE3-2|SLC26A9'] 89891 15601 RCCSCSCK True PC9_epitope_Rep6 888.30743466868 888.30632993586 72.216 2 -0.5081986487514643 0.14571226314143193 0.9551614987861955 ['ENST00000229812.7_1_6:36462563-36462647:-|nuORF'] 61648 20707 LKQTSRKKKKE True NCI_RA007_Epitope_Rep2 1372.8514322203598 1372.8503299358601 85.634 2 -0.5082372914724772 0.1457427894112999 0.9551789054334902 ['ENSG00000119720|ENST00000354366|NRDE2'] 14930 6083 DYEARHSAGS True NCI_RA007_Epitope_Rep1 1091.46320030863 1091.46210993586 27.699 2 -0.5082414931963886 0.14575445296809666 0.9551807977964334 ['ENST00000488653.6_1_3:123680081-123680240:-|nuORF'] 61521 11451 LKEVRRHLQHF True PC9_epitope_Rep4 1461.83169983529 1461.8300549037901 51.814 3 -0.5082424045360306 0.14575445296809666 0.9551812082355812 ['ENST00000509144.2_1_8:106809432-107072670:-|nuORF', 'ENST00000520594.5_1_8:106799777-107072670:-|nuORF', 'ENST00000520078.5_1_8:106810397-107072670:-|nuORF'] 136680 23239 WWWKLHFVWER True H1975_Epitope_Rep3 1671.84628727027 1671.84409987172 97.029 4 -0.5083592937276493 0.145813099804112 0.9552338280869032 ['ENSG00000168282|ENST00000305386|MGAT2'] 25397 10667 FEDDLRRDL True PC9_epitope_Rep1 1177.57275075761 1177.57111490379 45.921 3 -0.5083608496814456 0.145813099804112 0.955234528215866 ['ENSG00000171773|ENST00000301944|NXNL1'] 14984 14186 DYGYFRFFQDR True PC9_epitope_Rep1 1512.6786128084798 1512.6775099358601 59.388 2 -0.5083884848724564 0.145813099804112 0.955246961794918 ['nc|ENSG00000144504|Q9P2S6-4|ANKMY1', 'nc|ENSG00000144504|Q9P2S6-2|ANKMY1', 'nc|ENSG00000144504|Q9P2S6|ANKMY1', 'ENSG00000144504|ENST00000401804|ANKMY1'] 112778 17990 TLHSVTPAVL True PC9_epitope_Rep5 1036.59169529704 1036.5905899358602 74.215 2 -0.5084217651860505 0.14584362139917695 0.9552619317935515 ['IMPG2|p.I1076Ffs*25|1|0.53|ENSG00000081148|chr3:101232789-101232789|G/-|frameshift_variant', 'ENSG00000081148|ENST00000193391|IMPG2'] 89980 7042 RDIEQASLAA True H1975_Epitope_Rep3 1072.55128703704 1072.55018993586 32.052 2 -0.5085644056379856 0.14592352389261082 0.9553260514626364 ['ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant'] 79532 6900 PDAGRRCRR True NCI_RA007_Epitope_Rep1 1085.56247794077 1085.56138993586 30.842 2 -0.5086076897837014 0.14592797419184936 0.9553454950579665 ['ENST00000478324.5_1_11:532391-532556:-|nuORF'] 89372 16077 QWTSRKRK True NCI_RA007_Epitope_Rep5 1088.6203100867199 1088.61920993586 68.57 2 -0.5086090939810234 0.14592797419184936 0.9553461257303411 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 3816 5369 AGVFMRMKLPG True NCI_RA007_Epitope_Rep3 1205.64130542509 1205.6396549037902 28.126 3 -0.508613220107555 0.14592797419184936 0.9553479788749032 ['ENST00000424397.2_1_4:113606608-113606656:+|nuORF'] 56400 5682 LDEAHERTIH True NCI_RA007_Epitope_Rep2 1219.59454883135 1219.59344993586 26.715 2 -0.5086801121194875 0.14592797419184936 0.9553780138118404 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF', 'ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33'] 57293 5215 LEAAGDKF True H1975_Epitope_Rep1 849.42323298961 849.42212993586 25.123 2 -0.5086818453840967 0.14592797419184936 0.9553787918609368 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 116709 16994 TVDEVESLI True PC9_epitope_Rep6 1003.5073565363899 1003.50624993586 77.918 2 -0.5087024926265691 0.14594203137087083 0.9553880594817772 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 8587 4304 ATVSSADGKPP True H1975_Epitope_Rep2 1028.5138388991597 1028.51274993586 21.667 2 -0.5088235386813449 0.14601951974193123 0.9554423632325222 ['INSM2|p.A504Gfs*37|1|0.33|ENSG00000168348|chr14:35535763-35535763|C/-|frameshift_variant', 'ENSG00000168348|ENST00000307169|INSM2'] 20993 6296 EQRERERWQR True NCI_RA007_Epitope_Rep2 1471.7392560024298 1471.73761490379 29.095 3 -0.508844357313711 0.14601951974193123 0.9554516980238031 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 41178 11020 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep4 1121.48115925233 1121.48006993586 50.164 2 -0.5088750100832429 0.14603357472021067 0.9554654397114469 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 83454 19831 PTPLLRPSRR True PC9_epitope_Rep3 1191.72002412799 1191.71836490379 81.515 3 -0.5090026896918662 0.14614637678774214 0.9555226455216831 ['ENSG00000196313|ENST00000434423|POM121'] 13637 12754 DPLPWNLLS True PC9_epitope_Rep1 1053.54949613189 1053.54838993586 53.932 2 -0.5090668953128903 0.14617448118098184 0.9555513921903369 ['ENST00000548334.5_1_12:49959983-49961499:-|nuORF'] 8438 4657 ATNRPDAL True PC9_epitope_Rep4 856.4402800360799 856.43918993586 24.437 2 -0.5090800755173888 0.14617448118098184 0.9555572916786514 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 65614 5446 LRYKNCRRFWN True NCI_RA007_Epitope_Rep1 1554.7990198080197 1554.7973849037903 25.256 3 -0.5091764354718281 0.14622144690935424 0.9556004054650397 ['ENSG00000170791|ENST00000355315|CHCHD7', 'nc|ENSG00000170791|Q9BUK0-2|CHCHD7', 'nc|ENSG00000170791|Q9BUK0-4|CHCHD7'] 26113 12384 FGSGAGSSSF True PC9_epitope_Rep5 902.37701107318 902.37590993586 52.631 2 -0.5091917329369261 0.1462354974080474 0.9556072471553266 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 98683 14056 SGEDAFVF True PC9_epitope_Rep6 870.37594844402 870.37484993586 65.939 2 -0.5092966736197968 0.14626119010005265 0.9556541608163441 ['DCAF8L1|p.V310F|1|0.35|ENSG00000226372|chrX:27980407-27980407|C/A|missense_variant'] 97088 17235 SDGSFFLY True NCI_RA007_Epitope_Rep5 934.4072485723 934.4067049679301 73.068 1 -0.509303693965336 0.14626119010005265 0.9556572979911855 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 77733 10533 NTNMYQQLSYP True H1975_Epitope_Rep3 1357.59725125329 1357.59614993586 45.582 2 -0.5093132138595005 0.14626119010005265 0.9556615518837898 ['GPR22|p.P33Q|1|0.27|ENSG00000172209|chr7:107474158-107474158|C/A|missense_variant'] 18383 7210 EITESASLYFT True H1975_Epitope_Rep1 1259.5921487895098 1259.5910499358602 32.747 2 -0.5093488413062425 0.14627042503825838 0.9556774691559776 ['TG|p.R2605Efs*49|1|0.12|ENSG00000042832|chr8:133116665-133116665|C/-|frameshift_variant', 'nc|ENSG00000042832|P01266-2|TG', 'ENSG00000042832|ENST00000220616|TG'] 36990 7837 GVNISTVVL True NCI_RA007_Epitope_Rep3 900.5280324113199 900.52692993586 37.95 2 -0.5093580691122751 0.14627042503825838 0.9556815911983751 ['CLCA4|p.L900V|1|0.31|ENSG00000016602|chr1:86580283-86580283|C/G|missense_variant'] 120087 7057 VDVLYNEEKQK True NCI_RA007_Epitope_Rep2 1363.69834519355 1363.69669490379 32.073 3 -0.5093949588750525 0.14627042503825838 0.9556980670562745 ['STK11-HMHA1|1|fusion', 'STK11|p.L282Afs*3|2|0.54|ENSG00000118046|chr19:1221314-1221315|-/C|frameshift_variant', 'ENSG00000118046|ENST00000326873|STK11', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'STK11|p.D284Efs*5|1|0.57|ENSG00000118046|chr19:1221326-1221333|CTGACCTG/-|frameshift_variant', 'STK11|p.P281Rfs*6|1|0.7|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'STK11|p.N259Kfs*28|1|0.77|ENSG00000118046|chr19:1221255-1221255|C/-|frameshift_variant', 'STK11|p.T250Rfs*37|1|0.54|ENSG00000118046|chr19:1221227-1221227|C/-|frameshift_variant', 'STK11|p.D176Tfs*111|1|0.54|ENSG00000118046|chr19:1220433-1220433|G/-|frameshift_variant', 'STK11|p.H168Lfs*119|1|0.44|ENSG00000118046|chr19:1220411-1220411|A/-|frameshift_variant', 'STK11|p.E265Gfs*19|1|0.52|ENSG00000118046|chr19:1221271-1221280|GAGAACATCG/-|frameshift_variant', 'ENST00000586358.5_1_19:1207098-1220516:+|nuORF', 'STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 75581 12947 NLDGKSLVA True H1975_Epitope_Rep3 915.5025459394699 915.50199496793 55.031 1 -0.5094260629315728 0.1462772521596051 0.9557119554953862 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2', 'nc|ENSG00000132932|Q9NTI2-3|ATP8A2'] 124094 20748 VGSNSLHLPVP True PC9_epitope_Rep2 1118.60840799034 1118.60730993586 85.247 2 -0.5094692456405877 0.1462772521596051 0.9557312321174027 ['MAP3K12|p.K398Sfs*10|1|0.61|ENSG00000139625|chr12:53483979-53483979|A/-|frameshift_variant', 'MAP3K12|p.I490Sfs*29|1|0.13|ENSG00000139625|chr12:53483396-53483396|A/-|frameshift_variant', 'MAP3K12|p.S536Hfs*45|1|0.22|ENSG00000139625|chr12:53483099-53483099|G/-|frameshift_variant', 'nc|ENSG00000139625|Q12852|MAP3K12', 'ENSG00000139625|ENST00000547488|MAP3K12', 'ENST00000547020.1_1_12:53878838-53879309:-|nuORF', 'ENST00000433092.5_1_3:185155245-185169222:+|nuORF', 'nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 55372 5333 LAEPM[Oxidation]TYKLM[Oxidation] True NCI_RA007_Epitope_Rep2 1227.58793320043 1227.5868299358601 25.364 2 -0.5094758839058703 0.1462772521596051 0.9557341948904124 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 110618 8820 TFTHIKSNL True PC9_epitope_Rep4 1059.57129420563 1059.57018993586 41.457 2 -0.5094786157263066 0.1462772521596051 0.9557354141085207 ['INPP5F|p.V141L|1|0.45|ENSG00000198825|chr10:119791622-119791622|G/T|missense_variant'] 15393 6840 EAIFELSQGEE True H1975_Epitope_Rep1 1250.56666231766 1250.5655699358601 31.355 2 -0.5095252831701608 0.14628648524137022 0.9557562382344946 ['ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3'] 106793 11281 SVAEDSVLY True H1975_Epitope_Rep2 981.46549172441 981.46494496793 48.439 1 -0.5095394717583851 0.14628648524137022 0.9557625681486048 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 80162 16215 PFSSLGLP True H1975_Epitope_Rep2 816.4381547777599 816.43760496793 67.58 1 -0.5095536401737217 0.14628648524137022 0.9557688884254032 ['ENST00000426282.6_1_22:45534715-45559573:-|nuORF'] 94281 18497 RRRGGWAL True NCI_RA007_Epitope_Rep3 970.5573159073398 970.55620993586 80.941 2 -0.509595613639108 0.14631216992152152 0.9557876083028128 ['ENST00000495071.6_1_13:37633718-37633817:-|nuORF'] 342 8904 AAIKGNQESVK True PC9_epitope_Rep6 1143.62478633047 1143.62368993586 44.213 2 -0.5096021148890032 0.14631216992152152 0.9557905073166675 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 43734 9464 IHERTHTREK True NCI_RA007_Epitope_Rep2 1305.6901805516898 1305.68908993586 41.424 2 -0.5096304005312129 0.14631216992152152 0.955803118792242 ['ENST00000406845.1_1_21:24463107-24463425:-|nuORF', 'ENSG00000188033|ENST00000311437|ZNF490'] 128688 10770 VPVSRSLGPLG True NCI_RA007_Epitope_Rep4 1080.6291434349198 1080.6280499358602 48.275 2 -0.5097020876401324 0.14638961551749666 0.955835069996064 ['ENSG00000265203|ENST00000584701|RBP3', 'RBP3|p.R577Afs*124|1|0.23|ENSG00000265203|chr10:47350211-47350211|C/-|frameshift_variant', 'RBP3|p.P715Hfs*43|1|0.18|ENSG00000265203|chr10:47350624-47350624|C/-|frameshift_variant'] 101058 14953 SLGERINTL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 62.339 2 -0.5097370230422577 0.14638961551749666 0.9558506349672492 ['ENSG00000171303|ENST00000302909|KCNK3'] 136201 11269 WRRWNRFCRRK True NCI_RA007_Epitope_Rep2 1662.89023485426 1662.8885849037902 48.42 3 -0.509768477454883 0.14641288433382138 0.9558646457538503 ['nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-2|CACNA1C'] 10163 24937 AYVKLLSKTP True PC9_epitope_Rep3 1118.66994561774 1118.6688499358602 101.29 2 -0.5097753483541373 0.14641288433382138 0.9558677058559322 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'ENST00000503126.1_1_5:179133324-179137021:+|nuORF', 'nc|ENSG00000127022|P27824-3|CANX'] 122037 9339 VFVVGKMDGL True PC9_epitope_Rep5 1063.5736027047499 1063.5725099358601 40.876 2 -0.5098206982580691 0.14641288433382138 0.9558878996982144 ['ENSG00000066084|ENST00000301180|DIP2B', 'nc|ENSG00000151240|Q9Y2E4-2|DIP2C', 'ENSG00000151240|ENST00000280886|DIP2C'] 78871 7198 PAFKDRVP True PC9_epitope_Rep2 928.5130510535198 928.51194993586 33.078 2 -0.5098335281572043 0.14641288433382138 0.9558936115518918 ['ENSG00000130477|ENST00000519716|UNC13A'] 131199 7435 VTENLSDGLR True NCI_RA007_Epitope_Rep2 1102.56185172074 1102.56074993586 33.548 2 -0.5098570969525142 0.14644337698229914 0.9559041030078173 ['ENSG00000135776|ENST00000344517|ABCB10', 'ABCB10|p.Q638Rfs*12|1|0.27|ENSG00000135776|chr1:229521631-229521631|C/-|frameshift_variant'] 73786 13545 NAGANGCTLSY True H1975_Epitope_Rep2 1069.44985874361 1069.4487699358601 57.238 2 -0.5099455283190214 0.14647386862754774 0.9559434520727406 ['nc|ENSG00000226266|Q9UIF8-4|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-2|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-5|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-3|BAZ2B', 'ENSG00000123636|ENST00000392783|BAZ2B'] 46228 3262 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 17.234 2 -0.5099606194707843 0.146485499498281 0.955950164712902 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 82909 11904 PSALSPSCL True PC9_epitope_Rep6 873.4266041178901 873.42550993586 57.024 2 -0.509967366698836 0.146485499498281 0.9559531656941971 ['ENST00000322764.9_1_7:143086019-143087053:+|nuORF'] 89320 18622 QWLVRYAA True PC9_epitope_Rep5 1005.5396001545298 1005.53850993586 76.655 2 -0.5100153988843771 0.14649471987367174 0.955974525011218 ['BCL11B|p.G714R|1|0.27|ENSG00000127152|chr14:99174696-99174696|C/G|missense_variant'] 16052 7410 EDWTLVETP True PC9_epitope_Rep6 1088.50260550912 1088.5015099358602 37.723 2 -0.5100763386675449 0.14649471987367174 0.9560016139092004 ['nc|ENSG00000196091|Q00872-5|MYBPC1'] 31363 7750 GDRETLATL True PC9_epitope_Rep6 974.5032742154599 974.50216993586 39.169 2 -0.510098838428444 0.14649471987367174 0.9560116125871327 ['ENSG00000272031|ENST00000606888|ANKRD34A'] 99614 12194 SIFHLCSV True PC9_epitope_Rep2 904.44767391564 904.44656993586 52.217 2 -0.5102360389956152 0.14652279755247055 0.9560725495447198 ['nc|ENSG00000146378|Q9P1P5-2|TAAR2', 'ENSG00000146378|ENST00000367931|TAAR2'] 56504 10791 LDFHFNWKIWP True H1975_Epitope_Rep3 1501.7506555499297 1501.7495499358602 46.589 2 -0.5102970454813932 0.14652279755247055 0.9560996267764241 ['ENST00000540171.2_1_14:105147650-105150445:+|nuORF'] 135261 9537 WFREFWEQRFR True H1975_Epitope_Rep1 1685.82152907441 1685.8204299358601 41.607 2 -0.5103394996481538 0.1465508733839929 0.9561184630227961 ['ENSG00000164082|ENST00000395052|GRM2'] 87442 15599 QPYMQEVV True PC9_epitope_Rep2 992.4637179025998 992.4631649679301 65.279 1 -0.51036096480839 0.1465508733839929 0.9561279846921505 ['ENSG00000127318|ENST00000538666|IL22'] 61571 22579 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 93.288 3 -0.5104201205402187 0.1465978058849652 0.9561542181849029 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 80952 14032 PIERFERENRR True H1975_Epitope_Rep3 1500.7909572221197 1500.78986993586 59.295 2 -0.5106842048550677 0.14667039455290035 0.9562712017466313 ['ENSG00000011454|ENST00000373647|RABGAP1'] 45391 13137 IQEGKLVGI True PC9_epitope_Rep5 955.5702315764698 955.56912993586 55.535 2 -0.5107127053345883 0.14667039455290035 0.9562838143578697 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant', 'ENST00000476402.1_1_3:183685269-183689578:-|nuORF'] 107214 22888 SVIQIHLLL True PC9_epitope_Rep5 1034.64881625034 1034.6477099358601 93.038 2 -0.5107743652911959 0.14667039455290035 0.9563110931129354 ['ENSG00000139055|ENST00000266397|ERP27'] 77474 9982 NSYYSSPA True PC9_epitope_Rep6 887.36611203631 887.36500993586 48.949 2 -0.5107884624284253 0.14667039455290035 0.9563173281917433 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 70813 7117 LYASPEIVNGK True NCI_RA007_Epitope_Rep5 1189.63428838501 1189.6331899358602 34.055 2 -0.5108460822140874 0.146700874942438 0.9563428069624645 ['ENSG00000163545|ENST00000367157|NUAK2'] 40445 2597 HRAREHRRP True NCI_RA007_Epitope_Rep5 1213.6653032165298 1213.66366490379 14.707 3 -0.5108735591447934 0.14670525744544394 0.9563549534757432 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 78977 5680 PAISTNKT True PC9_epitope_Rep1 830.44978209062 830.44868993586 26.671 2 -0.5108923225960113 0.14670525744544394 0.9563632468103372 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 133896 16798 VYHMFISI True PC9_epitope_Rep1 1008.5102741722 1008.50916993586 69.438 2 -0.5109331685358937 0.14670525744544394 0.9563812968926726 ['COL25A1|p.E626Sfs*42|1|0.1|ENSG00000188517|chr4:108819299-108819299|C/-|frameshift_variant'] 11812 15662 DHFEKRIV True PC9_epitope_Rep4 1042.55597849466 1042.55488993586 68.171 2 -0.5109376259417721 0.14670525744544394 0.9563832663521714 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R2486Efs*2|1|0.46|ENSG00000168702|chr2:140541030-140541030|T/-|frameshift_variant', 'LRP1B|p.I1892Nfs*4|1|0.17|ENSG00000168702|chr2:140769298-140769299|-/C|frameshift_variant', 'LRP1B|p.V1432M|1|0.06|ENSG00000168702|chr2:140868139-140868139|C/T|missense_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 57465 7540 LEC[Carbamidomethyl]RRELMQL True H1975_Epitope_Rep1 1346.67987604121 1346.6787699358601 33.996 2 -0.510966421807374 0.14670525744544394 0.9563959881079334 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2'] 61572 23639 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 97.422 3 -0.5111225260287251 0.1467333212741116 0.9564649113643247 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 35818 12990 GTLAENLLEA True H1975_Epitope_Rep3 1029.5342399905699 1029.5331499358601 55.2 2 -0.5111284377304853 0.1467333212741116 0.9564675201085956 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 129066 6278 VQPFHKCK True NCI_RA007_Epitope_Rep2 985.5167565349699 985.51564993586 29.026 2 -0.5111811026758096 0.14674493940440367 0.9564907558759008 ['ENST00000592484.5_2_19:33668516-33668627:+|nuORF'] 25520 7778 FEHQGATGP True H1975_Epitope_Rep3 942.4195445914997 942.4184499358599 34.902 2 -0.5111956878614734 0.14674493940440367 0.9564971894375865 ['ENST00000513325.5_1_4:89527093-89527177:+|nuORF'] 79759 18223 PEATPIFSL True PC9_epitope_Rep3 973.51204799401 973.51094993586 75.306 2 -0.511232558773482 0.14677300008221655 0.9565134505467922 ['ENST00000392650.7_1_17:71334055-71334301:-|nuORF'] 114061 10145 TPEQIEKIY True H1975_Epitope_Rep2 1119.5811901829898 1119.58008993586 44.022 2 -0.5112460901168657 0.14677300008221655 0.9565194172654423 ['ENSG00000086288|ENST00000199447|NME8'] 28424 18079 FSASHTLPAL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 74.843 2 -0.5112762263076257 0.14678461614351251 0.9565327040845131 ['nc|ENSG00000132297|C9JL84-2|HHLA1', 'ENSG00000132297|ENST00000414222|HHLA1'] 79536 16058 PDARAAGETLL True PC9_epitope_Rep2 1112.5825871653199 1112.5814899358602 67.023 2 -0.5113151069763577 0.14678461614351251 0.9565498424173648 ['ENST00000461395.5_1_2:220378960-220396865:+|nuORF'] 113699 19725 TLYLKYSNI True PC9_epitope_Rep1 1113.6070110080102 1113.6059099358602 80.7 2 -0.5113504162737238 0.1467938178230845 0.9565654027531912 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 61576 23990 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 98.798 3 -0.5113563213727466 0.1467938178230845 0.9565680047026152 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 57329 13126 LEAEFVRRE True PC9_epitope_Rep3 1147.5985715826298 1147.59746993586 55.512 2 -0.5113659864084084 0.1467938178230845 0.9565722631682866 ['ENST00000590278.1_1_19:33696051-33698478:+|nuORF', 'ENSG00000130881|ENST00000253193|LRP3'] 121609 11645 VFFVCFVP True PC9_epitope_Rep2 956.4829967951998 956.48188993586 50.119 2 -0.5115180770487607 0.14684992766013416 0.9566392399952143 ['ENSG00000174944|ENST00000309170|P2RY14'] 130209 5772 VSESGPVSP True H1975_Epitope_Rep3 857.4130622287299 857.4125149679301 27.228 1 -0.511522451480392 0.14684992766013416 0.9566411654093934 ['ENST00000369851.5_1_1:110091277-110091355:+|nuORF'] 80571 11165 PGPSASSLL True PC9_epitope_Rep2 827.43888305375 827.43778993586 48.271 2 -0.5115528435750932 0.14684992766013416 0.956654541048745 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12', 'PRR12|p.L501Qfs*34|1|0.13|ENSG00000126464|chr19:49599557-49599558|-/AGGCTGT|frameshift_variant'] 110714 4133 TGFPGFPV True PC9_epitope_Rep5 820.41194002992 820.41084993586 20.972 2 -0.5115806900106538 0.14684992766013416 0.9566667940416125 ['COL11A1|p.G862V|1|0.26|ENSG00000060718|chr1:102979407-102979407|C/A|missense_variant'] 81639 6694 PLLLDSSHGP True NCI_RA007_Epitope_Rep4 1034.53965972418 1034.53856993586 32.372 2 -0.5116265972458763 0.14686153947325156 0.9566869893682505 ['ENST00000463471.6_1_1:2491166-2493466:+|nuORF'] 3146 5721 AGDEGGKAFFK True NCI_RA007_Epitope_Rep1 1125.5454733806098 1125.54436993586 26.31 2 -0.5116850470779801 0.14686153947325156 0.956712693791705 ['ENST00000444439.1_1_7:54487838-54488018:+|nuORF'] 63366 14054 LLTYNWAPDL True PC9_epitope_Rep1 1204.6128246644398 1204.61116490379 58.897 3 -0.5117867293524584 0.14687556512732833 0.9567573876622922 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 37196 4532 GVQWCNHSSLP True H1975_Epitope_Rep2 1226.55024149122 1226.5486049037902 22.543 3 -0.5118625540734061 0.14692683247579438 0.9567906972014519 ['ENST00000543998.1_1_12:124181644-124189091:+|nuORF'] 42048 9255 IDIKVIPN True H1975_Epitope_Rep3 910.5487678559 910.54766993586 40.592 2 -0.5118686319202996 0.14692683247579438 0.9567933664863738 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 7531 11245 ASDVDYRHYL True NCI_RA007_Epitope_Rep2 1237.57275075761 1237.57164993586 48.326 2 -0.5118796014829403 0.14692683247579438 0.9567981838684101 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB'] 59503 22981 LFRLLLRFLRL True PC9_epitope_Rep6 1458.9551094432597 1458.95347490379 101.49 3 -0.5119150552334532 0.14692683247579438 0.9568137514194003 ['ENSG00000171954|ENST00000269703|CYP4F22'] 71561 7887 MCACACMCTC True PC9_epitope_Rep3 1038.25936447106 1038.2582699358602 35.321 2 -0.5119499332804832 0.14692683247579438 0.9568290627863179 ['ENST00000544665.7_1_16:31343047-31343377:+|nuORF'] 110754 5295 TGGIQDLK True NCI_RA007_Epitope_Rep4 830.4497820906199 830.44868993586 26.919 2 -0.5119514659782479 0.14692683247579438 0.9568297355592903 ['ENST00000510543.1_1_4:63683420-63684509:+|nuORF', 'ENST00000554011.5_1_14:57675329-57698504:-|nuORF', 'ENSG00000070367|ENST00000621441|EXOC5'] 30688 17831 GALDTNQVLL True PC9_epitope_Rep4 1042.5658744720201 1042.56476993586 76.621 2 -0.511975134287794 0.14694085544268007 0.9568401238675595 ['nc|ENSG00000171606|Q96GC6-4|ZNF274', 'ENST00000595146.1_1_19:58722883-58724506:+|nuORF', 'ZNF274|p.K448Nfs*13|1|0.1|ENSG00000171606|chr19:58212522-58212522|A/-|frameshift_variant', 'nc|ENSG00000171606|Q96GC6-3|ZNF274', 'nc|ENSG00000171606|Q96GC6-2|ZNF274', 'ENSG00000171606|ENST00000617501|ZNF274'] 92138 6890 RLEALREAGT True PC9_epitope_Rep5 1114.6094706195 1114.60836993586 31.472 2 -0.5119948223459078 0.14695487794854936 0.9568487640178263 ['ENST00000347404.9_1_12:88974054-88974564:-|nuORF'] 31279 7205 GDGRDSPVL True PC9_epitope_Rep4 914.4457593393399 914.44466993586 35.018 2 -0.5121023147382179 0.14698727852470334 0.9568959185080528 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant'] 55368 4797 LAEPM[Oxidation]TYKLM[Oxidation] True H1975_Epitope_Rep3 1227.58793320043 1227.5868299358601 23.579 2 -0.5121028608146536 0.14698727852470334 0.9568961579785753 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 3013 12365 AFLSLNIAV True NCI_RA007_Epitope_Rep4 946.5487678559 946.54766993586 54.559 2 -0.5121257632015542 0.14698727852470334 0.9569062006120657 ['ENSG00000149516|ENST00000278865|MS4A3', 'nc|ENSG00000149516|Q96HJ5-3|MS4A3', 'nc|ENSG00000149516|Q96HJ5-2|MS4A3'] 87400 9542 QPVSGTQVV True PC9_epitope_Rep3 913.48689587533 913.4863449679301 41.651 1 -0.5121271659867954 0.14698727852470334 0.9569068156829214 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 5778 5627 APDEKYVAA True PC9_epitope_Rep2 962.4709114580199 962.46980993586 27.029 2 -0.5121478193703353 0.14698727852470334 0.9569158708264129 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 73583 12098 MVVQATGGP True PC9_epitope_Rep3 858.4269384710599 858.4263849679301 51.576 1 -0.5121519812542125 0.14698727852470334 0.9569176953964329 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 7366 12550 ARRRRRLQLEW True NCI_RA007_Epitope_Rep2 1538.9018450837798 1538.9007499358602 53.43 2 -0.5121662414014038 0.14698727852470334 0.9569239466871471 ['ENST00000504087.5_1_4:125633653-125633758:-|nuORF'] 99947 11233 SINQENFEL True PC9_epitope_Rep3 1092.50875351872 1092.5076499358602 48.217 2 -0.5122861773464206 0.14704335535614502 0.956976501710361 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B'] 23167 4916 EVLEENEQR True NCI_RA007_Epitope_Rep2 1144.53603089572 1144.5349299358602 23.742 2 -0.5122956973052718 0.14704335535614502 0.9569806716135001 ['ENSG00000197651|ENST00000358859|CCER1'] 116290 3340 TTDLQATK True NCI_RA007_Epitope_Rep2 876.45526139388 876.45416993586 17.654 2 -0.5123150184017882 0.14704335535614502 0.9569891338277824 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.G2678A|1|0.1|ENSG00000054654|chr14:64051946-64051946|G/C|missense_variant', 'SYNE2|p.G2678V|1|0.26|ENSG00000054654|chr14:64051946-64051946|G/T|missense_variant'] 8339 17156 ATKLYEGV True PC9_epitope_Rep6 879.4701831820298 879.46908993586 78.576 2 -0.5123372811569739 0.14704335535614502 0.9569988831739323 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2'] 58696 8541 LERQNQEYEIL True H1975_Epitope_Rep3 1433.7150578868498 1433.7134249037902 37.841 3 -0.5124405579212968 0.14708540814146492 0.9570440928726796 ['ENSG00000196859|ENST00000355612|KRT39', 'CON__Q6IFU6'] 5325 5812 ALRELGQTG True PC9_epitope_Rep2 943.5086939490699 943.50758993586 27.75 2 -0.5124418951434369 0.14708540814146492 0.9570446780577267 ['ENSG00000120833|ENST00000551556|SOCS2'] 135332 18171 WGKKMKGKI True NCI_RA007_Epitope_Rep5 1074.6372060208198 1074.63610993586 76.7 2 -0.5124453951933553 0.14708540814146492 0.9570462097004488 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 85895 15657 QHFEFEYQT True PC9_epitope_Rep5 1227.5196525555898 1227.5185499358602 65.236 2 -0.51252008092351 0.14719802793755135 0.9570788848150242 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 113173 14424 TLPRSSSMAA True PC9_epitope_Rep5 1019.50697969691 1019.50588993586 60.481 2 -0.5125995780532203 0.14725650337699045 0.9571136485929405 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 46132 6894 ISKFRHQNI True NCI_RA007_Epitope_Rep4 1141.6356257976902 1141.63399490379 33.136 3 -0.5126303711724565 0.14725650337699045 0.9571271097942232 ['nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'ENST00000563518.5_1_15:41796702-41799561:-|nuORF', 'nc|ENSG00000062524|P29376-5|LTK'] 43344 6909 IGACEFMK True H1975_Epitope_Rep3 897.40884587877 897.40774993586 31.535 2 -0.5126330625657645 0.14725650337699045 0.957128286216559 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A', 'nc|ENSG00000079335|Q9UNH5-4|CDC14A'] 120911 5700 VENRGRVNY True H1975_Epitope_Rep3 1105.5628547802498 1105.56174993586 26.955 2 -0.5126460216490449 0.1472705163177441 0.9571339504325859 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 135333 18261 WGKKMKGKI True NCI_RA007_Epitope_Rep5 1074.6372060208198 1074.63610993586 77.047 2 -0.5126588292638425 0.14728452879796236 0.9571395480078893 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 83716 11433 PVGGVGGQVQ True PC9_epitope_Rep4 896.4715801643599 896.4710349679301 51.745 1 -0.5127576353634893 0.1473149730511371 0.9571827167329341 ['WNK1|p.M1007V|1|0.14|ENSG00000060237|chr12:880907-880907|A/G|missense_variant'] 16253 11091 EEEWLYGDE True H1975_Epitope_Rep1 1168.4560492395196 1168.4549499358602 47.625 2 -0.5127831583320871 0.14732847003154576 0.9571938636353641 ['nc|ENSG00000145216|Q6UN15-4|FIP1L1', 'nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1'] 91311 5697 RGREKRWQERE True H1975_Epitope_Rep1 1528.79710523172 1528.79545490379 26.98 3 -0.5128155688294338 0.14732847003154576 0.9572080161381266 ['ENSG00000184209|ENST00000526639|SNRNP35', 'nc|ENSG00000184209|Q16560-2|SNRNP35'] 81841 11113 PLPVPPPTG True PC9_epitope_Rep6 873.49600400705 873.49490993586 53.684 2 -0.5128613758678862 0.14732847003154576 0.9572280137481831 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 103044 16712 SPFTVGVAA True PC9_epitope_Rep4 847.4439684341899 847.44286993586 72.252 2 -0.512862331075694 0.14732847003154576 0.9572284306972964 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 136133 5206 WRQSTWNGI True NCI_RA007_Epitope_Rep4 1146.55704112382 1146.55540490379 26.56 3 -0.5128901194434213 0.14732847003154576 0.9572405593058614 ['ENST00000468328.5_1_1:204951018-204956638:+|nuORF'] 126900 18393 VLQQARIALRG True NCI_RA007_Epitope_Rep3 1223.7462388758297 1223.7445949037901 80.537 3 -0.5128931304418434 0.14732847003154576 0.9572418733761099 ['COL11A1|p.I519V|1|0.4|ENSG00000060718|chr1:103014528-103014528|T/C|missense_variant'] 85847 4764 QHEVNEQL True PC9_epitope_Rep6 995.4672230599099 995.46612993586 25.771 2 -0.512902481009143 0.14732847003154576 0.957245954032426 ['ENSG00000143375|ENST00000271636|CGN', 'ENST00000467998.1_1_1:151508635-151509819:+|nuORF'] 82295 4316 PPHPPPPPP True H1975_Epitope_Rep3 931.49158733295 931.49048993586 21.718 2 -0.5129999230440515 0.14732847003154576 0.9572884649539573 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 37001 7251 GVNPVREVKDL True NCI_RA007_Epitope_Rep5 1224.68263555976 1224.68098490379 34.567 3 -0.5130446947641185 0.1473564880228699 0.9573079892274424 ['nc|ENSG00000134243|Q99523-2|SORT1', 'ENSG00000134243|ENST00000256637|SORT1'] 68780 13340 LTLLDLSSNKL True PC9_epitope_Rep6 1215.70745332527 1215.70579490379 62.972 3 -0.5130562491531641 0.1473564880228699 0.9573130270840933 ['ENSG00000181754|ENST00000369864|AMIGO1'] 31330 8257 GDLLNLDLGP True H1975_Epitope_Rep3 1025.53932537101 1025.53822993586 36.746 2 -0.5130921649569697 0.1473656541096453 0.9573286846268567 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000472057.1_1_22:29727525-29736761:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 20321 7120 ENTYKSRRWSY True H1975_Epitope_Rep1 1488.7109755659199 1488.70986993586 32.412 2 -0.5131059027200949 0.1473656541096453 0.9573346727471659 ['CACNA1E|p.R2052W|1|0.09|ENSG00000198216|chr1:181794990-181794990|C/T|missense_variant'] 55229 12411 LADEFGVA True H1975_Epitope_Rep1 820.3966838885999 820.39613496793 52.773 1 -0.5131137865064966 0.1473656541096453 0.9573381089731269 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51'] 141612 10933 YTRQERYRARP True PC9_epitope_Rep2 1494.7803925384198 1494.77875490379 47.374 3 -0.5132367926612506 0.1473772403936193 0.9573917018360358 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 131089 18307 VTDVTANLI True PC9_epitope_Rep5 944.51786165044 944.51676993586 75.432 2 -0.5132850935522436 0.1473772403936193 0.9574127356387029 ['ENSG00000173894|ENST00000310942|CBX2'] 43372 8174 IGAIAAGNAVI True PC9_epitope_Rep2 968.5654805492 968.56438993586 36.797 2 -0.5133275223550691 0.14740525356069192 0.9574312074194524 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 79904 17301 PEPPPPLCLL True NCI_RA007_Epitope_Rep3 1074.5783537320199 1074.5772499358602 75.934 2 -0.5133712906904558 0.14740525356069192 0.9574502576125529 ['ENSG00000139289|ENST00000266671|PHLDA1'] 87025 7443 QMRRKHYYRSY True NCI_RA007_Epitope_Rep1 1586.78884904714 1586.7877499358601 32.949 2 -0.5135672270448098 0.14746854157768505 0.9575354800719693 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 45516 17505 IQNYIQSLL True PC9_epitope_Rep3 1090.60225998074 1090.60116993586 72.512 2 -0.5136141905857035 0.14748254620123202 0.9575558926255069 ['RP1|p.W919L|1|0.15|ENSG00000104237|chr8:54626638-54626638|G/T|missense_variant'] 133898 16691 VYHMFISI True PC9_epitope_Rep5 1008.5102741722 1008.50916993586 69.206 2 -0.5136310144133793 0.14749655036467574 0.9575632037184422 ['COL25A1|p.E626Sfs*42|1|0.1|ENSG00000188517|chr4:108819299-108819299|C/-|frameshift_variant'] 81711 15638 PLNFSANFLP True H1975_Epitope_Rep3 1118.5760452329 1118.57494993586 65.568 2 -0.513662017714807 0.14750570804382462 0.9575766749194196 ['ENST00000532986.1_1_11:62339151-62341470:-|nuORF'] 100221 16951 SIWDGSEVL True NCI_RA007_Epitope_Rep5 1004.48147614172 1004.48097496793 71.961 1 -0.5136685824247711 0.14750570804382462 0.9575795270376848 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1'] 97001 3688 SCCCCCCC True PC9_epitope_Rep4 826.10688658094 826.10578993586 20.317 2 -0.5136862554406817 0.14750570804382462 0.9575872047664208 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 118934 18129 VADRIPQVL True PC9_epitope_Rep3 1009.5920296502098 1009.59092993586 74.934 2 -0.5137378005153013 0.14755256241787124 0.9576095932172515 ['PCDHGA12|p.S667R|1|0.12|ENSG00000253159|chr5:141432760-141432760|C/G|missense_variant'] 57099 14038 LDSRSQLIG True PC9_epitope_Rep1 987.53490869691 987.53380993586 58.835 2 -0.5138333663605532 0.14763226622427358 0.9576510847124131 ['ENST00000333677.6_1_5:149011902-149012052:+|nuORF'] 74571 7437 NGAYPGSVAA True NCI_RA007_Epitope_Rep4 905.4242956187699 905.42318993586 35.25 2 -0.5138562892895255 0.14764141646409565 0.9576610337629391 ['ENSG00000182968|ENST00000330949|SOX1'] 139048 23593 YLATFFWML True PC9_epitope_Rep5 1190.58343911246 1190.58234993586 95.733 2 -0.5138614332929003 0.14764141646409565 0.9576632661965533 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 42237 8158 IDSRVQEY True PC9_epitope_Rep3 1008.4876241513198 1008.48652993586 36.358 2 -0.513884657350495 0.14764141646409565 0.9576733443475431 ['ENSG00000149346|ENST00000334534|SLX4IP'] 62235 14773 LLFALSLLK True NCI_RA007_Epitope_Rep4 1016.66340368532 1016.66230993586 64.285 2 -0.5139209530454127 0.14765541594809886 0.9576890923506879 ['ENST00000490035.6_1_3:116164040-116164325:-|nuORF'] 15469 8842 EALQDFQKY True H1975_Epitope_Rep3 1140.5451390274397 1140.5440499358601 39.017 2 -0.513963435416102 0.1476694149722432 0.9577075205766411 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant', 'DNAH8|p.A1622Qfs*38|1|0.24|ENSG00000124721|chr6:38852742-38852742|G/-|frameshift_variant'] 9217 13573 AVNGNIEDAVT True PC9_epitope_Rep5 1101.5302172392899 1101.52912993586 57.232 2 -0.5140296297077596 0.1476998374037151 0.9577362259941671 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD8|p.N1407Tfs*5|1|0.16|ENSG00000169629|chr2:112388727-112388728|-/TA|frameshift_variant', 'RGPD8|p.N1407Ifs*5|1|0.15|ENSG00000169629|chr2:112388725-112388726|-/GA|frameshift_variant', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5'] 58183 6618 LELADEAR True PC9_epitope_Rep1 915.4661604307499 915.46506993586 30.258 2 -0.5140618477867133 0.14770898341271144 0.957750193674725 ['ENSG00000180667|ENST00000315927|YOD1', 'nc|ENSG00000180667|Q5VVQ6-2|YOD1'] 91402 18627 RHIEAKKLEK True NCI_RA007_Epitope_Rep3 1250.7459045226599 1250.74480993586 81.501 2 -0.5140736699143214 0.14770898341271144 0.9577553183613785 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN'] 39946 11301 HPIPLPSAA True PC9_epitope_Rep5 901.50215201665 901.50104993586 48.462 2 -0.5140901709831279 0.14770898341271144 0.9577624707272409 ['nc|ENSG00000137090|Q9Y5R6-2|DMRT1', 'ENST00000564322.1_1_9:841703-894198:+|nuORF', 'ENSG00000137090|ENST00000382276|DMRT1', 'DMRT1|p.E144D|1|0.08|ENSG00000137090|chr9:847037-847037|G/C|missense_variant'] 34734 4471 GQENLKTDL True NCI_RA007_Epitope_Rep5 1016.51383889916 1016.51274993586 23.847 2 -0.5141249869300529 0.14773697694278395 0.9577775595130524 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'STRN4|p.V351Sfs*20|1|0.27|ENSG00000090372|chr19:46727996-46727996|C/-|frameshift_variant'] 55763 9347 LALVINAFY True H1975_Epitope_Rep1 1022.58006798418 1022.5789699358601 40.861 2 -0.5141434565912348 0.14773697694278395 0.9577855628514855 ['ENST00000359358.8_1_18:30253844-30254171:-|nuORF'] 44735 15780 ILWKEMDQLPV True NCI_RA007_Epitope_Rep1 1370.72680887086 1370.72570993586 65.476 2 -0.5141808376984501 0.14776496863401978 0.9578017584741024 ['ENSG00000125484|ENST00000372146|GTF3C4'] 72428 25071 MKMKVRKKKKK True PC9_epitope_Rep1 1431.9258005442696 1431.92416490379 101.34 3 -0.5141965246709258 0.14776496863401978 0.957808553971997 ['TTLL7|p.R30M|1|0.2|ENSG00000137941|chr1:83951913-83951913|C/A|missense_variant'] 67337 11371 LSSFCKWQK True PC9_epitope_Rep2 1125.5641006502099 1125.56245490379 49.06 3 -0.5143254852256102 0.14777653704676827 0.9578643967615166 ['ADAMTS12|p.L695Wfs*10|1|0.13|ENSG00000151388|chr5:33624291-33624291|G/-|frameshift_variant', 'ADAMTS12|p.G1085Efs*13|1|0.4|ENSG00000151388|chr5:33576772-33576772|C/-|frameshift_variant', 'nc|ENSG00000151388|P58397-3|ADAMTS12', 'ADAMTS12|p.A1476Pfs*77|1|0.08|ENSG00000151388|chr5:33546079-33546079|C/-|frameshift_variant', 'ENSG00000151388|ENST00000504830|ADAMTS12', 'ADAMTS12|p.S327Ifs*68|1|0.07|ENSG00000151388|chr5:33661976-33661976|C/-|frameshift_variant', 'ADAMTS12|p.E406Kfs*25|1|0.08|ENSG00000151388|chr5:33649676-33649676|C/-|frameshift_variant', 'ADAMTS12|p.T317A|1|0.31|ENSG00000151388|chr5:33662007-33662007|T/C|missense_variant'] 34074 6850 GLWIWRYQEKK True H1975_Epitope_Rep1 1505.8143184356497 1505.81266490379 31.392 3 -0.5143396886208963 0.14777653704676827 0.957870544746533 ['ENSG00000206190|ENST00000555815|ATP10A'] 14582 6348 DTWESLQK True NCI_RA007_Epitope_Rep5 1005.47672511445 1005.4761749679301 31.092 1 -0.5144052226246039 0.14780209855662654 0.9578989052100455 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 112582 16415 TLENKEVI True PC9_epitope_Rep1 944.51786165044 944.51676993586 67.963 2 -0.5144143649464882 0.14780209855662654 0.9579028608364449 ['ENST00000316660.6_1_18:57570124-57570343:+|nuORF'] 105368 20198 SRRLAPVG True PC9_epitope_Rep6 854.5086343794198 854.50752993586 90.363 2 -0.5144185124854147 0.14780209855662654 0.9579046552957792 ['ENST00000464942.6_1_12:122710297-122710606:-|nuORF'] 32712 14768 GGTTLVITGN True PC9_epitope_Rep3 931.4974605590301 931.49691496793 61.94 1 -0.5144313933436843 0.1478300848918737 0.9579102280252968 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 102909 15140 SPASLDSM True H1975_Epitope_Rep3 806.3480194440201 806.3474749679301 63.635 1 -0.5144396889431404 0.1478300848918737 0.9579138167991752 ['nc|ENSG00000173612|Q5T6X5-2|GPRC6A', 'nc|ENSG00000173612|Q5T6X5-3|GPRC6A', 'ENSG00000173612|ENST00000310357|GPRC6A'] 80467 6311 PGLALLEPRRP True NCI_RA007_Epitope_Rep5 1217.72444080209 1217.72278490379 30.954 3 -0.5144663847264088 0.14784164983662546 0.9579253646192415 ['nc|ENSG00000204314|Q99946-2|PRRT1', 'ENSG00000204314|ENST00000211413|PRRT1'] 81826 12609 PLPVPPPTG True PC9_epitope_Rep1 873.49600400705 873.49490993586 53.368 2 -0.5144967987490502 0.14784164983662546 0.9579385188210209 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 55851 12460 LAPQQCDSVP True PC9_epitope_Rep5 1056.4909952796 1056.4898899358602 52.927 2 -0.5147622354715324 0.14793288017600892 0.9580532313082782 ['ENST00000521249.1_1_14:102697254-102697464:-|nuORF'] 136948 10611 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.3808149679301 46.129 1 -0.5148028405545284 0.14793288017600892 0.9580707653601647 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 118666 10363 TYSTEPNNL True PC9_epitope_Rep2 1037.46655435357 1037.46597496793 45.187 1 -0.5148297093416783 0.14793288017600892 0.9580823657973252 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 57626 9415 LEEEEEEDP True PC9_epitope_Rep2 1117.4298940613298 1117.42878993586 41.554 2 -0.5149288343474162 0.14797970676605315 0.9581251486150515 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 22172 8839 ESSVVAMFSP True NCI_RA007_Epitope_Rep4 1052.48484727 1052.48374993586 40.808 2 -0.5149864071324383 0.14802167131833854 0.9581499874084474 ['ENST00000540725.5_1_11:62622368-62622964:-|nuORF', 'ENST00000544983.1_1_11:62622535-62622964:-|nuORF'] 122836 9471 VGGTVLNVS True PC9_epitope_Rep3 844.4654321547599 844.46432993586 41.381 2 -0.5150136428291943 0.14802167131833854 0.9581617352727944 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 60479 17888 LGYMKHYRNIP True PC9_epitope_Rep3 1390.7179755226598 1390.7168699358601 74.008 2 -0.5150165601957304 0.14802167131833854 0.95816299355645 ['ENSG00000153147|ENST00000283131|SMARCA5', 'SMARCA5|p.F300Lfs*9|1|0.09|ENSG00000153147|chr4:143527965-143527966|-/ACATCACG|frameshift_variant'] 138149 20363 YGLHKGAL True PC9_epitope_Rep1 857.4759372688098 857.47484993586 83.156 2 -0.5150331382844704 0.14802836786288867 0.9581701434702797 ['ENST00000397601.5_1_13:97999167-98009782:+|nuORF'] 59544 16908 LFSSDSGFSNY True H1975_Epitope_Rep2 1222.51423282198 1222.5131299358602 70.283 2 -0.5150549241241147 0.14802836786288867 0.958179538517946 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000525371.1_1_8:145542526-145550314:-|nuORF', 'ENST00000531896.5_1_8:145541583-145550314:-|nuORF'] 53443 8303 KREQEERRDWL True H1975_Epitope_Rep1 1543.7855374885098 1543.7839049037898 36.869 3 -0.5150756465897489 0.14802836786288867 0.9581884740428924 ['ENSG00000159450|ENST00000614923|TCHH'] 5628 5475 ANTKNQKI True PC9_epitope_Rep6 915.5137793295099 915.51268993586 29.002 2 -0.5150836267079303 0.14802836786288867 0.9581919148232345 ['ENSG00000084674|ENST00000233242|APOB'] 1887 12505 AEIENLSWKV True H1975_Epitope_Rep3 1187.61863832087 1187.61754993586 53.297 2 -0.5151217549179252 0.14805877041779528 0.9582083526486752 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2', 'ENST00000487891.1_1_3:49020199-49020700:+|nuORF'] 62313 7304 LLGDEKQSI True PC9_epitope_Rep5 1001.5393253710099 1001.53822993586 33.056 2 -0.5151513154041694 0.1481007255655143 0.9582210946263273 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant'] 16578 4641 EEMLENAKWE True H1975_Epitope_Rep2 1277.5598031154097 1277.55814490379 22.951 3 -0.5151513162080104 0.1481007255655143 0.9582210949727958 ['ENST00000464884.1_1_3:155830239-155830734:-|nuORF'] 138547 6347 YIAAHPSSTK True NCI_RA007_Epitope_Rep2 1073.55055876105 1073.54946993586 29.295 2 -0.5151875010269504 0.1481007255655143 0.9582366898300745 ['ENSG00000077264|ENST00000372007|PAK3', 'nc|ENSG00000077264|O75914|PAK3', 'nc|ENSG00000077264|O75914-4|PAK3', 'nc|ENSG00000077264|O75914-3|PAK3'] 44142 12364 IISDPEYLL True PC9_epitope_Rep5 1061.56447748969 1061.5633899358602 52.553 2 -0.5152010307930288 0.14811470969648222 0.9582425201494931 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'nc|ENSG00000168918|Q92835-3|INPP5D'] 87443 14898 QPYMQEVV True PC9_epitope_Rep4 992.4637179025998 992.4631649679301 65.244 1 -0.5152076341352766 0.14814510833880498 0.9582453655570696 ['ENSG00000127318|ENST00000538666|IL22'] 86421 7405 QKKKKKKKK True NCI_RA007_Epitope_Rep1 1170.8288463009796 1170.82720490379 32.8 3 -0.515223330973058 0.1481590912821523 0.9582521290213336 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 63661 22559 LMRFRKPWPLR True PC9_epitope_Rep6 1498.8707281962998 1498.86962993586 99.789 2 -0.5152503540127055 0.148170641629598 0.958263771515548 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 81384 19097 PLDQTLPLQ True PC9_epitope_Rep4 1023.5600608155898 1023.55947496793 81.547 1 -0.5152644301044602 0.148170641629598 0.9582698353949017 ['PLEKHA7|p.R457L|1|0.21|ENSG00000166689|chr11:16817296-16817296|C/A|missense_variant'] 72568 17211 MLNVCFNKLF True PC9_epitope_Rep3 1227.6144219709101 1227.61276490379 71.358 3 -0.5152950484411837 0.14818462346530104 0.9582830241271321 ['ENSG00000115760|ENST00000421745|BIRC6'] 1744 15063 AEGQEVLFG True PC9_epitope_Rep1 948.4552613938798 948.45471496793 62.758 1 -0.5153142003749698 0.14819860484201888 0.9582912727585172 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 123407 12064 VGNALLNVVL True NCI_RA007_Epitope_Rep5 1010.61243074162 1010.61132993586 53.061 2 -0.515426867471078 0.14825452575949055 0.9583397825248403 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 23569 8785 EVYDDFLHYEK True H1975_Epitope_Rep2 1456.6510606479599 1456.64941490379 38.756 3 -0.5154771914385892 0.14825452575949055 0.958361441543114 ['CTSC|p.K384E|1|0.24|ENSG00000109861|chr11:88294248-88294248|T/C|missense_variant'] 43132 8539 IFAQFQHSREK True NCI_RA007_Epitope_Rep2 1389.71533267037 1389.7142299358602 37.86 2 -0.5154847681721019 0.14825452575949055 0.9583647020614178 ['ENSG00000145390|ENST00000692078|USP53'] 108098 18516 SYATLLHVL True PC9_epitope_Rep6 1015.5702315764698 1015.56912993586 83.863 2 -0.5154854007096314 0.14825452575949055 0.9583649742579256 ['ENSG00000183840|ENST00000329321|GPR39'] 43455 17053 IGGSSVLPAV True PC9_epitope_Rep1 898.5123823471799 898.51128993586 70.42 2 -0.5155250597931634 0.14828491711800426 0.9583820389279533 ['ENST00000565573.1_1_16:30900076-30905983:+|nuORF'] 42526 19494 IEEQIVLV True PC9_epitope_Rep6 941.5433481222899 941.54224993586 87.645 2 -0.5155894976588906 0.14829402786667323 0.958409758779219 ['ENSG00000144407|ENST00000272847|PTH2R'] 1203 4200 AECPPPRQP True H1975_Epitope_Rep3 993.4702002653698 993.46910993586 21.273 2 -0.5155916178415 0.14829402786667323 0.9584106706974991 ['nc|ENSG00000255529|Q6EEV4-2|POLR2M', 'ENST00000380557.4_2_15:57998925-58001412:+|nuORF', 'ENST00000567643.1_1_15:57998925-57999700:+|nuORF', 'ENST00000299638.7_2_15:57998859-58000941:+|nuORF', 'nc|ENSG00000255529|Q6EEV4|POLR2M'] 35476 8975 GSLDVEKVK True NCI_RA007_Epitope_Rep1 973.54441075145 973.54330993586 38.913 2 -0.5155931565794009 0.14829402786667323 0.9584113325232004 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant'] 130525 12844 VSQQRALAL True PC9_epitope_Rep4 984.5716285587998 984.57052993586 57.269 2 -0.5156410178514911 0.14833839336998442 0.9584319157617698 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 64166 14469 LPFRIQGQ True PC9_epitope_Rep1 957.5396001545298 957.53850993586 60.479 2 -0.5156605920218019 0.14833839336998442 0.9584403325321057 ['ENST00000564006.5_1_16:77225374-77227441:+|nuORF'] 63347 17691 LLTLFENTL True PC9_epitope_Rep5 1062.59611197114 1062.5950099358602 73.063 2 -0.51567671315782 0.14836634557001493 0.9584472639526547 ['GP5|p.P277T|1|0.47|ENSG00000178732|chr3:194397454-194397454|G/T|missense_variant'] 92405 24949 RLQCALAA True PC9_epitope_Rep4 844.4589073056799 844.4583549679301 104.5 1 -0.5156768846653143 0.14836634557001493 0.9584473376910243 ['ENSG00000157005|ENST00000287641|SST'] 85547 10982 QGEEVFQSL True PC9_epitope_Rep4 1035.48728979815 1035.48618993586 50.017 2 -0.5158074306452173 0.1484131412255079 0.9585034483126526 ['ENSG00000089154|ENST00000300648|GCN1'] 6582 6051 APVLLSQK True PC9_epitope_Rep6 854.5225531080599 854.52144993586 31.641 2 -0.5158631384039344 0.1484435254927058 0.9585273823165125 ['ENSG00000137628|ENST00000393743|DDX60'] 98122 10451 SESIENLPS True PC9_epitope_Rep4 974.4556553167 974.45454993586 47.91 2 -0.5158776487846786 0.14845749917952084 0.9585336155097719 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 8579 5558 ATVPNNKI True PC9_epitope_Rep3 855.48141657207 855.48030993586 26.458 2 -0.5159416316071647 0.14847147240773864 0.9585610957048444 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 47637 12994 IWEEAYQR True H1975_Epitope_Rep3 1093.5192586327698 1093.5186749679299 55.215 1 -0.5159811407081142 0.1485018542220472 0.9585780607410773 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 85189 16203 QEPGTEDEICS True PC9_epitope_Rep1 1206.47104768066 1206.46994993586 67.142 2 -0.5159861198303428 0.1485133893410344 0.9585801985466729 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 7460 5840 ASAQRELAA True PC9_epitope_Rep6 915.4773938207899 915.47628993586 30.681 2 -0.5160017607647545 0.1485133893410344 0.9585869137413595 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 67233 7368 LSRMLAGG True PC9_epitope_Rep6 803.4323582046699 803.43126993586 37.531 2 -0.5160737768784724 0.14855530214776774 0.9586178268773066 ['ENST00000428284.2_1_7:27168486-27168678:-|nuORF'] 69832 20659 LVGSLSDHIVL True PC9_epitope_Rep3 1151.6550238295902 1151.65392993586 84.738 2 -0.5160865340223888 0.14855530214776774 0.9586233019190836 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 9421 16602 AVTTAVQELLR True PC9_epitope_Rep3 1199.68738658703 1199.68573490379 68.997 3 -0.5161208047847697 0.14855530214776774 0.9586380085765795 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 103502 5305 SPQRIASAV True PC9_epitope_Rep2 927.5137793295098 927.51268993586 25.794 2 -0.516132988509907 0.14856683456660486 0.9586432364757628 ['nc|ENSG00000112139|Q8NFP4-2|MDGA1', 'ENSG00000112139|ENST00000434837|MDGA1'] 81 8129 AAALGEAAG True PC9_epitope_Rep5 729.36571811349 729.36516496793 36.207 1 -0.5161438877333555 0.14856683456660486 0.9586479129798253 ['ENSG00000187954|ENST00000530374|ZFTRAF1'] 125110 19250 VIFAYVADVT True PC9_epitope_Rep1 1096.5804619069997 1096.57936993586 78.845 2 -0.5161704775267445 0.148597210828548 0.9586593208911754 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 94378 25069 RRRREEERCKK True PC9_epitope_Rep2 1544.84300987832 1544.84190993586 102.1 2 -0.5162588477541885 0.14862758609374743 0.9586972254816796 ['ENST00000457924.2_1_17:20279644-20279995:-|nuORF', 'ENST00000480362.5_1_13:115047204-115067220:+|nuORF', 'nc|ENSG00000169062|Q9H1J1-2|UPF3A', 'ENSG00000169062|ENST00000375299|UPF3A'] 34528 11970 GPQTQLCI True PC9_epitope_Rep5 858.4269384710599 858.42584993586 51.038 2 -0.5162891509229102 0.14864155400971257 0.9587102201735423 ['ENST00000489288.6_1_12:2986423-2994675:+|nuORF', 'ENST00000461997.5_1_12:2986378-2997084:+|nuORF', 'ENST00000538636.5_3_12:2986404-2994675:+|nuORF'] 19898 13467 ELTRKIGFDP True H1975_Epitope_Rep2 1174.6346227381798 1174.63352993586 56.934 2 -0.5163070335744084 0.1486555214673601 0.9587178878957647 ['ENSG00000153790|ENST00000283905|C7orf31'] 127965 9823 VPHLLTEA True PC9_epitope_Rep2 878.48616759934 878.48506993586 43.119 2 -0.5163787035196593 0.14871870590937428 0.9587486128503901 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 110396 5301 TEVPEELT True H1975_Epitope_Rep2 916.4389426234 916.43784993586 25.446 2 -0.5164292068646771 0.14874907718808958 0.9587702582516334 ['COL5A1|p.A436Rfs*122|1|0.08|ENSG00000130635|chr9:134731636-134731636|G/-|frameshift_variant', 'COL5A1-DNPEP|1|fusion', 'nc|ENSG00000130635|P20908-2|COL5A1', 'ENSG00000130635|ENST00000371817|COL5A1'] 94042 23566 RRKRRRMKKKK True PC9_epitope_Rep4 1570.0314197846894 1570.0303299358602 98.954 2 -0.5164449189115579 0.14876060173564973 0.9587769914252356 ['ENST00000235372.11_1_1:14105080-14105206:+|nuORF'] 125520 24700 VKDRKKKKKK True H1975_Epitope_Rep3 1284.8717737421196 1284.8706699358602 102.75 2 -0.5164504855936207 0.14876060173564973 0.9587793768446832 ['nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 32484 16099 GGDDSFNTF True PC9_epitope_Rep4 958.3668403123 958.36629496793 69.861 1 -0.5164817296379762 0.1487885299955708 0.9587927644628328 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'TUBA3C|p.R215Afs*16|1|0.07|ENSG00000198033|chr13:19177341-19177341|C/-|frameshift_variant', 'TUBA1A|p.G43V|1|0.2|ENSG00000167552|chr12:49186709-49186709|C/A|missense_variant', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'TUBA1B|p.G43W|1|0.1|ENSG00000123416|chr12:49129599-49129599|C/A|missense_variant', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 101840 12526 SLPHSATVTL True PC9_epitope_Rep5 1024.5553097883198 1024.5542099358602 53.18 2 -0.5164844259288801 0.1487885299955708 0.9587939197052657 ['nc|ENSG00000054611|Q8WUA7-3|TBC1D22A', 'nc|ENSG00000054611|Q8WUA7-4|TBC1D22A', 'ENSG00000054611|ENST00000337137|TBC1D22A'] 38747 12453 HGLYSDLCL True PC9_epitope_Rep1 1019.4746169394699 1019.47350993586 52.767 2 -0.5165081786356304 0.14879761162691513 0.9588040961583781 ['ADAMTS20|p.S1688Y|1|0.25|ENSG00000173157|chr12:43376586-43376586|G/T|missense_variant'] 101287 7275 SLIFWNSFFFF True NCI_RA007_Epitope_Rep1 1453.7070594024497 1453.7054249037901 32.288 3 -0.5165289604625225 0.14879761162691513 0.9588129989935484 ['ENST00000306336.5_2_2:85835764-85835920:-|nuORF'] 5490 13143 ALYDFSVL True PC9_epitope_Rep2 926.4749342092999 926.47382993586 55.827 2 -0.5165533901027609 0.14879761162691513 0.9588234635910393 ['KLF10|p.P234L|1|0.26|ENSG00000155090|chr8:102651631-102651631|G/A|missense_variant'] 138027 11196 YFYKYFRDERR True NCI_RA007_Epitope_Rep1 1641.8052103039297 1641.8041099358602 47.55 2 -0.5165914745287455 0.14886078441021602 0.9588397752822985 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 22875 20821 EVDFNDFMMP True PC9_epitope_Rep1 1243.4889466742698 1243.4878499358601 84.916 2 -0.5168345012848006 0.14896827740051832 0.9589438074551112 ['ANKEF1|p.D753N|1|0.25|ENSG00000132623|chr20:10055586-10055586|G/A|missense_variant'] 131895 16041 VTRLFKNYF True PC9_epitope_Rep5 1186.6498788795 1186.6482449037899 66.69 3 -0.5168446951732643 0.14896827740051832 0.9589481690237133 ['ENST00000206423.7_2_3:112318632-112318818:-|nuORF'] 65973 10892 LSDVQKLNL True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 46.884 2 -0.5169497714928009 0.14896827740051832 0.9589931173797572 ['LRRC30|p.E72D|1|0.14|ENSG00000206422|chr18:7231354-7231354|G/C|missense_variant'] 63679 24276 LMTFFLAL True PC9_epitope_Rep2 954.5248616071799 954.52376993586 98.92 2 -0.5169985348946363 0.14901259677207715 0.9590139708783636 ['ENSG00000174669|ENST00000357440|SLC29A2'] 82609 5333 PQEQQQYWYRQ True H1975_Epitope_Rep1 1552.70589018548 1552.7047899358602 25.575 2 -0.5170255037432886 0.14901259677207715 0.9590255024092166 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.Q1101Lfs*31|1|0.16|ENSG00000119596|chr14:74798598-74798599|-/T|frameshift_variant', 'YLPM1|p.V675Cfs*24|1|0.33|ENSG00000119596|chr14:74782066-74782066|G/-|frameshift_variant'] 42596 15421 IEGDTIIGNN True PC9_epitope_Rep2 1044.50875351872 1044.5076499358602 64.596 2 -0.5170593639020525 0.14904051172707888 0.959039978969741 ['GPA33|p.E151D|1|0.09|ENSG00000143167|chr1:167063700-167063700|C/A|missense_variant'] 63050 9781 LLQEDLVHIRA True NCI_RA007_Epitope_Rep1 1305.74048478905 1305.7393899358601 42.048 2 -0.5170639670065362 0.14904051172707888 0.9590419468420145 ['nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'PLEKHA7|p.F829Sfs*28|1|0.08|ENSG00000166689|chr11:16794937-16794944|TTCTGAAG/-|frameshift_variant'] 67549 12018 LSTQSLIEL True PC9_epitope_Rep1 1002.5597264624199 1002.55862993586 51.089 2 -0.5171177776368461 0.1490708697577537 0.9590649489886095 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'ENST00000466513.1_1_17:57742174-57744343:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion'] 102456 11976 SLTVTDLEI True PC9_epitope_Rep6 989.52809198097 989.52698993586 57.332 2 -0.5171443045422157 0.14910122679262613 0.9590762866699086 ['nc|ENSG00000128604|Q13568-5|IRF5'] 140225 4211 YQYHLRQHTG True H1975_Epitope_Rep1 1301.62651766597 1301.6248649037902 21.16 3 -0.5173801403974085 0.1491619378751599 0.9591770371479666 ['ENSG00000197483|ENST00000598519|ZNF628'] 64537 19367 LPRQVELL True PC9_epitope_Rep1 966.5862159937799 966.58510993586 79.302 2 -0.5174158376927728 0.1491619378751599 0.9591922801056615 ['nc|ENSG00000113108|O95704-3|APBB3', 'nc|ENSG00000113108|O95704-2|APBB3', 'ENSG00000113108|ENST00000357560|APBB3', 'nc|ENSG00000113108|O95704-4|APBB3', 'ENST00000515056.5_1_5:139938172-139941333:-|nuORF', 'ENST00000509914.5_1_5:139938172-139941496:-|nuORF'] 137621 6799 YEFYHYVKEQF True NCI_RA007_Epitope_Rep2 1551.7034305739896 1551.70232993586 31.062 2 -0.5175153933763155 0.14917344528995014 0.9592347813087184 ['ENST00000466695.1_1_6:149387353-149395249:+|nuORF', 'ENSG00000111962|ENST00000367463|UST'] 45931 5846 ISEIESNRSFS True H1975_Epitope_Rep2 1267.60444480871 1267.60334993586 27.474 2 -0.5175243942578065 0.14917344528995014 0.9592386231703505 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 109970 13529 TEIANLLKE True H1975_Epitope_Rep2 1029.57062549929 1029.57007496793 57.176 1 -0.5175520693211257 0.14918739852731358 0.9592504350505315 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS', 'nc|ENSG00000170345|P01100-2|FOS'] 107863 7187 SVVHKKDH True PC9_epitope_Rep4 948.5141136826799 948.5130099358599 34.947 2 -0.5176524922343259 0.14923415002131915 0.9592932871762271 ['ENSG00000135090|ENST00000392533|TAOK3'] 117440 9513 TVQEFWDENVP True H1975_Epitope_Rep3 1362.6091958359798 1362.60808993586 41.597 2 -0.5177236082988984 0.14924565431288947 0.9593236252021679 ['nc|ENSG00000177300|Q8N7P3|CLDN22', 'ENSG00000185758|ENST00000541814|CLDN24'] 124399 21114 VGVDEEIVYAK True H1975_Epitope_Rep3 1220.6288686513997 1220.6277699358602 88.193 2 -0.517733641666707 0.14924565431288947 0.959327904872653 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.S138Kfs*9|1|0.03|ENSG00000092201|chr14:21370403-21370406|TTGC/-|frameshift_variant', 'SUPT16H|p.D140Vfs*9|1|0.04|ENSG00000092201|chr14:21370400-21370401|-/CA|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 47096 7009 ITTKLYDGFQY True H1975_Epitope_Rep1 1347.67106781655 1347.66996993586 31.995 2 -0.5177687464384484 0.14928995441277754 0.9593428775292974 ['nc|ENSG00000143393|Q9UBF8-3|PI4KB', 'nc|ENSG00000143393|Q9UBF8-2|PI4KB', 'ENSG00000143393|ENST00000368873|PI4KB'] 42454 9253 IEEALQAGLAP True H1975_Epitope_Rep1 1110.5920892198599 1110.59098993586 40.503 2 -0.5177822613475409 0.14928995441277754 0.9593486413798925 ['ENSG00000165943|ENST00000298894|MOAP1'] 109262 9508 TATIFNYL True H1975_Epitope_Rep2 941.4858332461699 941.48472993586 41.542 2 -0.517787680999246 0.149329354278031 0.9593509526894471 ['ENSG00000166535|ENST00000299698|A2ML1', 'nc|ENSG00000166535|A8K2U0-2|A2ML1'] 137491 7310 YEEFWIKYAKY True H1975_Epitope_Rep3 1538.74456710998 1538.7429149037903 33.09 3 -0.5178012878805138 0.149329354278031 0.9593567554206344 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 95438 3797 RWHELRRFWIR True NCI_RA007_Epitope_Rep5 1653.9116814914896 1653.9105899358601 20.786 2 -0.5178117682384171 0.149329354278031 0.9593612246608787 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 65097 10407 LQLTQSLQHW True H1975_Epitope_Rep1 1252.65642081192 1252.6553299358602 44.981 2 -0.5178154883949652 0.149329354278031 0.9593628110482009 ['ENST00000337743.8_1_20:13567977-13605857:-|nuORF'] 12201 15823 DIGAIGPVGAP True PC9_epitope_Rep3 965.5181960036099 965.51708993586 66.018 2 -0.517916369501394 0.14934330267106105 0.9594058228812492 ['COL22A1|p.G705Efs*110|1|0.39|ENSG00000169436|chr8:138737549-138737549|C/-|frameshift_variant', 'COL22A1|p.P1042Qfs*65|1|0.27|ENSG00000169436|chr8:138676583-138676583|G/-|frameshift_variant', 'nc|ENSG00000169436|Q8NFW1-2|COL22A1', 'ENSG00000169436|ENST00000303045|COL22A1'] 102620 11903 SLWPPFRCRWK True H1975_Epitope_Rep1 1474.76559442142 1474.7644899358602 50.786 2 -0.5179765700860378 0.14935725060667673 0.959431483818547 ['ENSG00000214711|ENST00000403897|CAPN14'] 81966 16668 PLTLSPAAPA True PC9_epitope_Rep2 936.5280324113198 936.52692993586 69.356 2 -0.5179840857346901 0.14936385099685204 0.9594346870930828 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 109316 16351 TAYDLSSVI True NCI_RA007_Epitope_Rep4 967.48622716899 967.4856749679301 70.894 1 -0.5179886162744746 0.14936385099685204 0.9594366180377865 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'ENST00000592516.1_1_19:11031622-11032430:+|nuORF'] 28707 10111 FSRMKPASP True PC9_epitope_Rep2 1019.5222358382298 1019.52112993586 44.229 2 -0.5180193970807137 0.14936385099685204 0.959449736323377 ['ENSG00000145246|ENST00000273859|ATP10D'] 28641 20424 FSLLIYMAI True PC9_epitope_Rep1 1069.5881901397302 1069.5870899358601 83.375 2 -0.5180739610467063 0.14936385099685204 0.9594729876804484 ['nc|ENSG00000170802|P32314-2|FOXN2', 'ENSG00000170802|ENST00000340553|FOXN2'] 85084 6148 QEKLLTYY True H1975_Epitope_Rep3 1056.54916177872 1056.5480699358602 28.659 2 -0.5181652320847167 0.1494105881002738 0.9595118727762524 ['ENSG00000100335|ENST00000325301|MIEF1'] 114484 6668 TPYKQEINA True PC9_epitope_Rep5 1062.53457434374 1062.53346993586 30.621 2 -0.5181822135746044 0.14941963407436554 0.959519106441878 ['ENSG00000138356|ENST00000374700|AOX1'] 90750 3393 RERPPEEVAA True NCI_RA007_Epitope_Rep5 1152.58873517492 1152.5870849037901 18.704 3 -0.5181829185190836 0.14941963407436554 0.9595194067220215 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 66806 11110 LSLTWQAD True PC9_epitope_Rep3 932.4603467743199 932.45924993586 47.731 2 -0.5181940135590068 0.14941963407436554 0.9595241327173717 ['ENST00000278935.7_2_11:117283083-117283290:+|nuORF'] 97757 4173 SEISKSVKP True H1975_Epitope_Rep3 973.54441075145 973.54330993586 21.169 2 -0.5182840910871772 0.1494639168497328 0.9595624962845519 ['ENSG00000125733|ENST00000313244|TRIP10'] 15745 6530 EC[Carbamidomethyl]GKAFTCSSY True H1975_Epitope_Rep2 1251.49000958286 1251.4889099358602 30.029 2 -0.5182849666716346 0.1494639168497328 0.9595628691442024 ['ENSG00000169981|ENST00000396056|ZNF35'] 1001 8307 AEAAQGQGL True H1975_Epitope_Rep3 843.4086455546299 843.40754993586 36.937 2 -0.5183498177430271 0.1494778602927917 0.9595904828787493 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 406 13726 AALEQLREKLE True H1975_Epitope_Rep1 1298.7194149913 1298.7183099358601 57.936 2 -0.5184121651205963 0.14957131850297536 0.9596170259299731 ['ENSG00000116017|ENST00000263620|ARID3A'] 91783 24562 RKGKKKKRWH True NCI_RA007_Epitope_Rep5 1350.8472903297798 1350.8461899358601 101.95 2 -0.5184265114534122 0.14957131850297536 0.9596231329406895 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 59074 10719 LEWIRRTV True H1975_Epitope_Rep2 1071.61891310439 1071.6178099358601 46.257 2 -0.5184348978797217 0.14958203573184725 0.9596267028033875 ['ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 72882 15936 MPSAPVNTT True PC9_epitope_Rep5 916.4324177743201 916.43132993586 66.288 2 -0.5184546096839682 0.14958203573184725 0.9596350932426286 ['NBN|p.S537Vfs*9|1|0.31|ENSG00000104320|chr8:89953481-89953481|G/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 119988 16627 VDQIRVSVL True PC9_epitope_Rep2 1027.6025943339098 1027.6014899358602 69.201 2 -0.5184797564838807 0.14958203573184725 0.9596457964813073 ['ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 75648 19192 NLEWNWNL True PC9_epitope_Rep4 1087.50869394907 1087.50758993586 81.921 2 -0.5184860492048416 0.14958203573184725 0.9596484747425261 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR', 'RICTOR|p.L717Qfs*8|1|0.15|ENSG00000164327|chr5:38959219-38959223|GGAAA/-|frameshift_variant'] 14981 18993 DYGNGFGGF True PC9_epitope_Rep6 932.3664463894798 932.3658949679301 85.701 1 -0.5184862294569135 0.14958203573184725 0.9596485514594221 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 16004 13905 EDSLECLSD True H1975_Epitope_Rep2 1009.3910064548099 1009.38990993586 58.632 2 -0.5185065929264273 0.14958203573184725 0.9596572181005841 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 43340 9995 IFYYRRSRPG True NCI_RA007_Epitope_Rep2 1313.6992886834098 1313.69818993586 43.5 2 -0.5185497348635291 0.14958203573184725 0.959675577677373 ['ENST00000352251.7_2_13:39611425-39611503:-|nuORF'] 12352 15227 DIRNYFQV True PC9_epitope_Rep1 1053.5243440132099 1053.5232499358601 63.391 2 -0.5186009948212175 0.14958203573184725 0.9596973893153028 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 14725 17612 DVLVQTMGAP True H1975_Epitope_Rep2 1029.5164817514499 1029.5153899358602 73.059 2 -0.5186083424989039 0.14958203573184725 0.9597005155929079 ['ENSG00000197892|ENST00000524189|KIF13B', 'nc|ENSG00000197892|Q9NQT8-2|KIF13B'] 92544 3795 RMHRYQIWT True H1975_Epitope_Rep1 1289.6451449355698 1289.64349490379 19.179 3 -0.5186236024579578 0.1495959744964023 0.959707008188051 ['CON__Q32PI4'] 93460 13721 RQHWALEEEIR True NCI_RA007_Epitope_Rep2 1465.7426100473697 1465.7415099358602 58.016 2 -0.5186311913745255 0.14960991280403854 0.9597102369211524 ['SPTBN2|p.R790W|1|0.28|ENSG00000173898|chr11:66704908-66704908|G/A|missense_variant'] 59850 8993 LGFQKRWRK True NCI_RA007_Epitope_Rep5 1217.71454482473 1217.7128849037902 41.249 3 -0.5186922666886452 0.14963778804864458 0.9597362193978757 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 100220 16313 SIWDGSEVL True NCI_RA007_Epitope_Rep3 1004.48147614172 1004.48097496793 71.866 1 -0.5186937106842033 0.14963778804864458 0.9597368336501105 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1'] 129587 24445 VRLRRLQQLVL True NCI_RA007_Epitope_Rep5 1392.90413649956 1392.90357496793 101.5 1 -0.5187693293980704 0.1496959863644558 0.9597689975624596 ['nc|ENSG00000104936|Q09013-12|DMPK', 'nc|ENSG00000104936|Q09013-10|DMPK', 'nc|ENSG00000104936|Q09013-11|DMPK', 'nc|ENSG00000104936|Q09013-15|DMPK', 'ENSG00000104936|ENST00000291270|DMPK', 'nc|ENSG00000104936|Q09013-16|DMPK'] 10621 5619 CNQHIENSP True H1975_Epitope_Rep2 1040.43454303264 1040.4334499358602 26.613 2 -0.5187695052553448 0.1496959863644558 0.9597690723552254 ['ENSG00000206557|ENST00000383763|TRIM71'] 98415 11607 SFELFADKVPK True NCI_RA007_Epitope_Rep2 1279.68123857743 1279.67959490379 49.74 3 -0.5188005753167054 0.1496959863644558 0.959782286069485 ['ENSG00000196262|ENST00000468812|PPIA'] 14819 8051 DVRRRYPHYP True H1975_Epitope_Rep1 1357.7003513125699 1357.69870490379 35.912 3 -0.5188293248279074 0.1497263102691009 0.9597945120006267 ['nc|ENSG00000114923|P48751-2|SLC4A3', 'ENSG00000114923|ENST00000358055|SLC4A3', 'nc|ENSG00000114923|P48751-3|SLC4A3', 'ENST00000425141.5_1_2:220498093-220506447:+|nuORF'] 105871 17764 SSPARALLL True PC9_epitope_Rep5 926.5549158654999 926.55380993586 73.347 2 -0.5189455777055836 0.14980579819400514 0.9598439408583271 ['ENSG00000184992|ENST00000341446|BRI3BP'] 55801 4566 LANSLAC[Carbamidomethyl]QGK True NCI_RA007_Epitope_Rep2 1060.5335290773498 1060.5324299358601 22.39 2 -0.5189794889419332 0.1498336638206519 0.9598583568518141 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 86658 8609 QLHFYRFYLEF True PC9_epitope_Rep1 1561.7717849173298 1561.7701349037898 37.95 3 -0.5189906441420222 0.1498336638206519 0.9598630987902123 ['ENSG00000005189|ENST00000261377|REXO5', 'nc|ENSG00000005189|Q96IC2-2|REXO5', 'ENST00000567297.5_1_16:20818275-20837201:+|nuORF'] 25864 11364 FFHFFSSL True NCI_RA007_Epitope_Rep4 1030.4912529797798 1030.49014993586 50.626 2 -0.5191445822048214 0.149978696207925 0.9599285238520116 ['ENST00000556419.5_1_14:23468454-23479348:-|nuORF'] 55021 4301 KYQTPDHWYP True H1975_Epitope_Rep2 1333.6091362663299 1333.60750490379 21.655 3 -0.5191652336710303 0.15000901299510022 0.9599372992257421 ['nc|ENSG00000133433|P0CG29|GSTT2', 'ENSG00000133433|ENST00000290765|GSTT2B'] 133261 22109 VVTLLSNY True PC9_epitope_Rep6 907.50148331031 907.5009349679301 97.984 1 -0.519237081306358 0.15001802510405401 0.9599678262303186 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 26530 10000 FIGSLWHRRHR True H1975_Epitope_Rep1 1463.80106841335 1463.79943490379 43.401 3 -0.5192433925719582 0.15001802510405401 0.9599705075723435 ['DGKK|p.N1247S|1|0.11|ENSG00000274588|chrX:50369016-50369016|T/C|missense_variant'] 139757 15920 YPEFPVLEC True NCI_RA007_Epitope_Rep3 1095.4946836777099 1095.4935899358602 70.282 2 -0.5192538135581787 0.15001802510405401 0.9599749348520227 ['SULT6B1|p.Y87F|1|0.68|ENSG00000138068|chr2:37187407-37187407|T/A|missense_variant', 'nc|ENSG00000138068|Q6IMI4-2|SULT6B1', 'ENSG00000138068|ENST00000535679|SULT6B1'] 19689 10454 ELRKQVAELGK True NCI_RA007_Epitope_Rep2 1269.74048478905 1269.7393899358601 45.257 2 -0.519279849849167 0.15002457807635589 0.9599859957586648 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 120697 5402 VEKEKEANSEK True NCI_RA007_Epitope_Rep5 1289.6463096206896 1289.64466490379 27.467 3 -0.5192851174211695 0.15002457807635589 0.9599882334901226 ['nc|ENSG00000164330|Q9UH73-2|EBF1', 'ENST00000518836.5_1_5:158126121-158526593:-|nuORF', 'ENSG00000164330|ENST00000313708|EBF1'] 66568 12298 LSIGSLDVLP True H1975_Epitope_Rep2 1012.580461907 1012.57936993586 52.388 2 -0.5193134798552925 0.15002457807635589 0.9600002817941019 ['ENST00000519610.1_1_5:150534942-150535005:-|nuORF'] 7022 10601 AQPGTLKEVWS True PC9_epitope_Rep5 1214.6295373577398 1214.62844993586 45.764 2 -0.5193236882529609 0.15002457807635589 0.9600046181288193 ['nc|ENSG00000149305|O95264-2|HTR3B', 'ENSG00000149305|ENST00000260191|HTR3B'] 12952 11822 DLLEPFIAV True PC9_epitope_Rep2 1015.5589981864299 1015.55790993586 50.803 2 -0.5193576577828104 0.1500360466640451 0.9600190470951409 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 1563 9807 AEERVSATLA True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 43.06 2 -0.5194317096425867 0.1500360466640451 0.960050498101237 ['ENST00000485802.1_1_22:20094124-20096613:+|nuORF'] 130765 19128 VSYTTPAPLE True PC9_epitope_Rep4 1076.5389910178399 1076.5378899358602 81.669 2 -0.5194558584056469 0.15006635754427933 0.9600607534703771 ['ENST00000470336.5_1_3:100469341-100565327:-|nuORF'] 136060 24622 WRFRLLCLL True PC9_epitope_Rep4 1218.7059542869797 1218.70484993586 103.2 2 -0.5194970260380873 0.15008028312088345 0.9600782352115109 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 107627 25064 SVPVVGTLRG True PC9_epitope_Rep3 983.5763795860698 983.5758349679301 101.76 1 -0.5195326102250555 0.1500942082411731 0.9600933448378933 ['ENSG00000142698|ENST00000488417|C1orf94'] 12775 9722 DLEQEGLEA True H1975_Epitope_Rep2 1002.4505699362599 1002.44946993586 42.381 2 -0.519646278300167 0.15012205711289872 0.9601416033526793 ['ENSG00000141295|ENST00000290216|SCRN2', 'ENST00000407215.7_1_17:45915212-45915578:-|nuORF', 'ENST00000581645.5_1_17:45915212-45916069:-|nuORF'] 110849 10257 TGQTGYIPSN True PC9_epitope_Rep5 1036.48253877088 1036.4814499358602 44.44 2 -0.5196855575379591 0.15012205711289872 0.9601582772447663 ['ENST00000472968.1_1_20:36012742-36022397:+|nuORF', 'ENSG00000197122|ENST00000373578|SRC', 'nc|ENSG00000197122|P12931-2|SRC', 'nc|ENSG00000197122|P12931-3|SRC'] 121364 7745 VEVPAAAP True H1975_Epitope_Rep1 752.4068546494799 752.40630496793 34.75 1 -0.519723061544166 0.15013598086437957 0.9601741964486339 ['KCNK10|p.A19E|1|0.41|ENSG00000100433|chr14:88263533-88263533|G/T|missense_variant'] 59946 12855 LGGSLTVLP True PC9_epitope_Rep1 855.50656869075 855.50546993586 54.321 2 -0.5197645814574611 0.15018267009616804 0.9601918190244382 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'RREB1|p.A429S|1|0.12|ENSG00000124782|chr6:7229384-7229384|G/T|missense_variant'] 83343 5073 PTEKVSIPAGP True NCI_RA007_Epitope_Rep4 1094.5971746003 1094.5960699358602 26.015 2 -0.5198526194395371 0.1502129750982962 0.9602291813218411 ['ENST00000454218.1_1_7:44148758-44149284:+|nuORF'] 92451 24081 RLRRKWLN True NCI_RA007_Epitope_Rep2 1140.6992291137599 1140.6981299358602 101.17 2 -0.5198679707388584 0.15022443563448118 0.9602356956526661 ['ENSG00000197892|ENST00000524189|KIF13B'] 113177 11560 TLPSLESLE True PC9_epitope_Rep2 987.51244191683 987.51134993586 49.791 2 -0.5198690076263147 0.15022443563448118 0.9602361356501681 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 55944 13071 LARLARASI True PC9_epitope_Rep1 969.6083484206899 969.60724993586 55.145 2 -0.5199153642500141 0.150244893278949 0.9602558060384211 ['ENST00000440915.1_1_8:100245318-100245837:-|nuORF'] 41364 19425 HWVVTEDGKI True PC9_epitope_Rep5 1182.6033226098998 1182.6022299358601 79.767 2 -0.519930306892333 0.150244893278949 0.9602621462846237 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17', 'TTC17|p.A306Mfs*28|1|0.15|ENSG00000052841|chr11:43397480-43397481|-/AT|frameshift_variant'] 43124 23665 IEYREEYRHMP True PC9_epitope_Rep3 1521.70344765733 1521.7023499358602 96.313 2 -0.5199405799619589 0.150244893278949 0.9602665051134189 ['CYP4V2|p.T81R|1|0.23|ENSG00000145476|chr4:186194527-186194527|C/G|missense_variant'] 13210 2737 DLSHIPLKDP True H1975_Epitope_Rep3 1133.60807363717 1133.6069699358602 14.615 2 -0.5199610423557849 0.150244893278949 0.9602751870165517 ['ENSG00000111647|ENST00000279907|BLTP3B'] 136059 24916 WRFRLLCLL True NCI_RA007_Epitope_Rep5 1218.7059542869797 1218.70484993586 103.33 2 -0.5199697103647841 0.150244893278949 0.9602788646411522 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 37029 16112 GVPEAVQLI True PC9_epitope_Rep6 924.5280324113198 924.52692993586 74.314 2 -0.5202022791546582 0.1502751932905255 0.960377518850037 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 13134 16698 DLRCPGSDVI True PC9_epitope_Rep2 1073.51754438061 1073.51644993586 69.477 2 -0.5202848723479614 0.15030549230945633 0.9604125458772079 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'ADGRL2|p.K951Nfs*54|1|0.08|ENSG00000117114|chr1:81970440-81970440|A/-|frameshift_variant', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 818 19323 ACFLGEIEV True PC9_epitope_Rep6 979.4684689298699 979.46736993586 86.974 2 -0.5203251602504132 0.15031448601192426 0.9604296300737375 ['ENSG00000177409|ENST00000318238|SAMD9L', 'SAMD9L|p.G1204R|1|0.27|ENSG00000177409|chr7:93132362-93132362|C/G|missense_variant'] 19260 8947 ELKFCFQYLNR True PC9_epitope_Rep1 1459.7282058531898 1459.72654490379 39.258 3 -0.5203252079779809 0.15031448601192426 0.9604296503121562 ['PADI2|p.V337F|1|0.13|ENSG00000117115|chr1:17083767-17083767|C/A|missense_variant'] 46223 3025 ISNIEDLPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 15.956 2 -0.5203307906724554 0.15031448601192426 0.9604320175908205 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 106471 3593 STKSHWASII True NCI_RA007_Epitope_Rep4 1128.5927579262 1128.59110490379 19.866 3 -0.5203709121285114 0.1503259409702886 0.9604490300886144 ['nc|ENSG00000188707|Q96FA7|ZBED10P'] 72886 9750 MPSRPEASL True PC9_epitope_Rep5 986.4855159763399 986.48440993586 42.474 2 -0.5204223945126808 0.1503259409702886 0.960470858499337 ['ENST00000549913.6_1_12:113306162-113306792:+|nuORF'] 109950 4652 TEGRQLQKDL True H1975_Epitope_Rep2 1186.6305999868998 1186.6289549037901 22.992 3 -0.5204704207883374 0.15035623618049299 0.9604912201336796 ['ENST00000562590.5_1_16:28922190-28936514:-|nuORF', 'ENSG00000177548|ENST00000358201|RABEP2'] 57209 5076 LDVSDEKMV True NCI_RA007_Epitope_Rep4 1034.4954119536999 1034.4943099358602 26.029 2 -0.5205061749076721 0.15037015199161424 0.9605063779018019 ['ENST00000472184.1_1_21:30380697-30391601:-|nuORF'] 15703 5979 EAVSTPSAAFP True H1975_Epitope_Rep3 1075.51858992643 1075.51748993586 28.009 2 -0.5206258791030446 0.1504168236238269 0.9605571206934442 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 26812 18939 FLAGAVTSV True PC9_epitope_Rep1 863.4752685624701 863.47416993586 77.633 2 -0.5206439857423049 0.1504258106780216 0.960564795451505 ['ENSG00000161179|ENST00000292778|YDJC', 'ENST00000468686.5_1_22:21984138-21984303:-|nuORF', 'nc|ENSG00000161179|A8MPS7-3|YDJC', 'nc|ENSG00000161179|A8MPS7-2|YDJC'] 83196 6283 PSTPLDQGIR True PC9_epitope_Rep1 1082.57202248162 1082.57092993586 28.98 2 -0.5206651137504732 0.1504258106780216 0.9605737506416494 ['ENST00000563594.5_1_16:90032383-90032806:+|nuORF'] 97406 8562 SEDWLEPP True NCI_RA007_Epitope_Rep2 971.4236269124299 971.42252993586 37.948 2 -0.5206975734489785 0.1504258106780216 0.9605875083608326 ['ENSG00000164077|ENST00000296473|MON1A', 'nc|ENSG00000164077|Q86VX9|MON1A'] 96932 11725 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 52.86 2 -0.5207328031510178 0.150439724210216 0.9606024395064189 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 19518 23130 ELPLFFYRKFR True PC9_epitope_Rep4 1514.8398049074997 1514.8387099358602 97.188 2 -0.5207666812528469 0.1504487095506354 0.9606167972224857 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 46226 3126 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 16.557 2 -0.5207680722348679 0.1504487095506354 0.9606173867156813 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 139491 17534 YLRTRPLSV True PC9_epitope_Rep3 1103.64512785223 1103.64402993586 72.628 2 -0.5207730102157124 0.1504487095506354 0.9606194794065278 ['ENST00000531791.1_1_11:65149642-65149978:-|nuORF'] 35107 8542 GQVQPKDV True PC9_epitope_Rep5 869.4606811274899 869.45958993586 37.801 2 -0.5208114419341969 0.1504552302351477 0.9606357661612617 ['ENSG00000166428|ENST00000392593|PLD4'] 134089 23034 VYKRVFFPFFR True PC9_epitope_Rep6 1504.8343256042397 1504.8332299358601 101.7 2 -0.5208219726548368 0.1504552302351477 0.9606402287886584 ['ENST00000249636.10_1_15:68480212-68480365:+|nuORF'] 125970 14123 VLDLIFYQRMK True NCI_RA007_Epitope_Rep1 1424.78499245332 1424.78388993586 58.967 2 -0.5208560761990502 0.1504552302351477 0.960654680559777 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 13369 7710 DLWRVWQWDEK True NCI_RA007_Epitope_Rep1 1559.7521121019097 1559.7504749037903 33.984 3 -0.5208594038292912 0.1504552302351477 0.9606560906519264 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.T1015Pfs*15|1|0.53|ENSG00000109111|chr17:28688125-28688125|G/-|frameshift_variant', 'nc|ENSG00000109111|Q7KZ85-3|SUPT6H'] 58684 8173 LERMDESV True PC9_epitope_Rep3 977.4487961144499 977.44768993586 36.415 2 -0.5209657795227696 0.15047073270568972 0.9607011649289725 ['ENSG00000089234|ENST00000419234|BRAP', 'nc|ENSG00000089234|Q7Z569-2|BRAP'] 57886 8680 LEFPYQYDFSR True H1975_Epitope_Rep1 1463.6721304457099 1463.67049490379 38.318 3 -0.5209703061149814 0.15047073270568972 0.9607030828553554 ['nc|ENSG00000007202|Q14667-2|BLTP2'] 130024 11041 VSALRRPEF True PC9_epitope_Rep1 1073.5981776598098 1073.5970899358601 47.356 2 -0.5209806689420181 0.15047073270568972 0.9607074735721419 ['ENST00000569812.1_2_16:1657253-1659971:-|nuORF', 'ENST00000569646.5_3_16:1657253-1660426:-|nuORF', 'ENST00000426508.6_2_16:1657253-1660715:-|nuORF'] 26966 5557 FLDWRKMK True PC9_epitope_Rep5 1122.6008205121 1122.59917490379 26.381 3 -0.5209826132305008 0.15047073270568972 0.9607082973594354 ['ADAM12|p.H681Tfs*29|1|0.16|ENSG00000148848|chr10:126043112-126043112|G/-|frameshift_variant', 'nc|ENSG00000148848|O43184-3|ADAM12', 'nc|ENSG00000148848|O43184-4|ADAM12', 'nc|ENSG00000148848|O43184-2|ADAM12', 'ENSG00000148848|ENST00000448723|ADAM12', 'nc|ENSG00000148848|O43184|ADAM12'] 103830 10612 SPYHYRLDW True H1975_Epitope_Rep1 1235.5723568347898 1235.5712499358601 45.773 2 -0.520991360704134 0.15047073270568972 0.9607120036086054 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 69040 13324 LTQIAKVVI True PC9_epitope_Rep1 983.6379172134699 983.63682993586 56.11 2 -0.5209960446664454 0.15047073270568972 0.9607139881599507 ['ENST00000468376.2_1_20:45867286-45947776:-|nuORF', 'nc|ENSG00000101040|Q9ULU4-3|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-6|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-19|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-16|ZMYND8', 'ENSG00000101040|ENST00000471951|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-11|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-10|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-13|ZMYND8', 'nc|ENSG00000101040|Q9ULU4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-20|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-5|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-9|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-22|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-12|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-14|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-18|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-21|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-8|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-23|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-15|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-17|ZMYND8', 'ZMYND8|p.Q264Kfs*22|1|0.19|ENSG00000101040|chr20:47283603-47283603|G/-|frameshift_variant', 'ZMYND8|p.C255*|1|0.08|ENSG00000101040|chr20:47283616-47283631|ATAACATTCTGGACAT/-|frameshift_variant'] 83198 5309 PSTPLDQGIR True PC9_epitope_Rep4 1082.57202248162 1082.57092993586 27.134 2 -0.5210017704867699 0.15047073270568972 0.9607164141238215 ['ENST00000563594.5_1_16:90032383-90032806:+|nuORF'] 11834 20067 DHGTFLIMEG True PC9_epitope_Rep3 1118.50664534374 1118.50554993586 82.437 2 -0.521073937804243 0.15051738817211344 0.9607469893714913 ['ALKBH3|p.L244F|1|0.11|ENSG00000166199|chr11:43919100-43919100|G/C|missense_variant'] 10630 5134 CPCPGASCK True NCI_RA007_Epitope_Rep3 864.32921565908 864.32810993586 27.189 2 -0.521205966689159 0.15053288148912136 0.9608029207038544 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1', 'ENSG00000181788|ENST00000312960|SIAH2'] 69971 12196 LVLLSFGVP True PC9_epitope_Rep6 943.5742543277499 943.57314993586 58.277 2 -0.5212082690130173 0.15053288148912136 0.9608038959750509 ['ENSG00000092439|ENST00000646667|TRPM7', 'TRPM7|p.R1018I|1|0.31|ENSG00000092439|chr15:50599232-50599232|C/A|missense_variant'] 110235 4678 TEQYIQTMTWL True H1975_Epitope_Rep3 1412.66460253712 1412.66296490379 23.118 3 -0.5212320746010839 0.15053288148912136 0.9608139799738625 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 11334 7409 DELTVPRYRTE True NCI_RA007_Epitope_Rep1 1377.6888431390096 1377.68719490379 32.816 3 -0.5212378303455748 0.15053288148912136 0.960816418063284 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1'] 59135 7112 LEYSEYMTGKK True H1975_Epitope_Rep1 1347.6380534361099 1347.63694993586 32.382 2 -0.5212440724328672 0.15053288148912136 0.9608190621497135 ['ENSG00000179059|ENST00000326866|ZFP42'] 94070 23731 RRLKHFPR True NCI_RA007_Epitope_Rep4 1108.67301436592 1108.67247496793 102.9 1 -0.5213257354159039 0.15053288148912136 0.9608536524594324 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 66689 6663 LSLCWKSP True NCI_RA007_Epitope_Rep2 932.47897404392 932.47786993586 30.529 2 -0.5213625465166059 0.15053288148912136 0.9608692439014366 ['ENST00000343280.8_1_19:57984308-57984569:-|nuORF'] 127224 23572 VLVYGLHTEG True PC9_epitope_Rep2 1086.57095985246 1086.5698699358602 96.146 2 -0.5214353971827844 0.1505467880295986 0.9609000986351818 ['ENST00000372232.7_1_X:107372037-107374546:+|nuORF'] 130871 7888 VTDAEFSQAV True PC9_epitope_Rep4 1065.4978544818498 1065.4967499358602 37.771 2 -0.521461306394065 0.1505582293815277 0.9609110716446415 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 111191 13195 THIFTSDGL True PC9_epitope_Rep4 989.4818104948899 989.48070993586 58.652 2 -0.5214922771037988 0.1505582293815277 0.960924188007191 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 94071 25010 RRLKHFPR True NCI_RA007_Epitope_Rep5 1108.67301436592 1108.67247496793 103.7 1 -0.5215521731295252 0.15058268953777662 0.960949553648943 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 64981 15460 LQGTGPVEFT True PC9_epitope_Rep1 1047.52367530687 1047.52256993586 64.288 2 -0.5215975362892423 0.15058268953777662 0.9609687639901426 ['SCAP|p.P50Q|1|0.26|ENSG00000114650|chr3:47435111-47435111|G/T|missense_variant'] 65504 12250 LRMFFDCLY True H1975_Epitope_Rep2 1206.55657274162 1206.5554699358602 52.201 2 -0.5216181643901386 0.15058268953777662 0.9609774993603685 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 83407 11162 PTLDVASL True H1975_Epitope_Rep1 814.44363408102 814.4430849679301 47.903 1 -0.5216315871455459 0.15058268953777662 0.9609831834229601 ['ENSG00000074276|ENST00000261944|CDHR2', 'CDHR2|p.P805L|1|0.23|ENSG00000074276|chr5:176584695-176584695|C/T|missense_variant'] 45871 5419 ISDRSQNA True PC9_epitope_Rep1 889.42535824793 889.42426993586 25.678 2 -0.5216413440488864 0.15058268953777662 0.9609873150954672 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 86473 7748 QKRTRPVMKEK True NCI_RA007_Epitope_Rep2 1399.8081875093897 1399.8070899358602 34.765 2 -0.5216832712297919 0.15058268953777662 0.9610050693469068 ['HMGB1|p.N37Ifs*34|1|0.04|ENSG00000189403|chr13:30463556-30463571|GAAAACTCTGAGAAGT/-|frameshift_variant'] 63641 9777 LMPKIFFCKK True PC9_epitope_Rep3 1253.70284305249 1253.70118490379 42.561 3 -0.5216911814419516 0.15058268953777662 0.9610084189090333 ['OR2B3|p.R307K|1|0.12|ENSG00000204703|chr6:29086329-29086329|C/T|missense_variant'] 57627 9555 LEEEEEEDP True PC9_epitope_Rep2 1117.4298940613298 1117.42878993586 42.099 2 -0.5217217188470442 0.15058268953777662 0.9610213497546098 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 135301 9365 WFWQDRFWLPP True PC9_epitope_Rep1 1576.7615545867998 1576.7599049037901 40.88 3 -0.5217339246907087 0.15058268953777662 0.9610265181652363 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 90893 11871 REWSRLSREVI True H1975_Epitope_Rep3 1429.7789955560897 1429.77788993586 50.811 2 -0.5217420124613225 0.15058268953777662 0.9610299428091786 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-5|CAPRIN2'] 56354 6644 LDDKYFKEWHK True NCI_RA007_Epitope_Rep2 1507.74596409231 1507.7443049037902 30.454 3 -0.5218135815296904 0.15059659230404113 0.9610602469548188 ['ENST00000558906.5_1_15:50152393-50311102:-|nuORF', 'ENST00000559726.5_1_15:50152393-50311102:-|nuORF', 'ENSG00000104043|ENST00000284509|ATP8B4'] 19347 17015 ELLHIKAVAHL True PC9_epitope_Rep4 1242.7448418934998 1242.74320490379 73.441 3 -0.5219283898730368 0.1506759632066516 0.96110885727673 ['nc|ENSG00000079337|O95398-3|RAPGEF3', 'ENSG00000079337|ENST00000449771|RAPGEF3', 'ENST00000479866.5_1_12:48143124-48152369:-|nuORF', 'ENST00000482843.5_1_12:48142600-48152369:-|nuORF', 'nc|ENSG00000079337|O95398-2|RAPGEF3'] 108817 16212 SYVKDLVVQR True PC9_epitope_Rep1 1205.6768219033297 1205.6751749037899 67.176 3 -0.5220091592725079 0.15071766419534868 0.9611430537618316 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 130843 9007 VTAVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 39.997 2 -0.5220170453500009 0.15071766419534868 0.9611463925370247 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 130022 4813 VSALLHSST True NCI_RA007_Epitope_Rep4 913.4868958753301 913.48578993586 24.948 2 -0.5220886306693094 0.15071766419534868 0.9611766995446567 ['ENSG00000198786|ENST00000361567|MT-ND5'] 97648 7874 SEGEEVPQDK True H1975_Epitope_Rep1 1116.4934973774 1116.49240993586 35.238 2 -0.522141425621338 0.15072909677102597 0.9611990507618771 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1', 'AIFM1|p.A128E|1|0.15|ENSG00000156709|chrX:130147843-130147843|G/T|missense_variant'] 100461 14829 SLAIREITRGK True NCI_RA007_Epitope_Rep2 1242.7408191422198 1242.73918490379 62.356 3 -0.5221426522875007 0.15072909677102597 0.9611995700770138 ['ENST00000412638.2_1_1:227884598-227884916:-|nuORF'] 87264 8847 QPNGAGFAA True PC9_epitope_Rep3 831.38751618723 831.38640993586 38.982 2 -0.5221715234590844 0.15074299554857293 0.9612117927665664 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1'] 117678 7199 TVTSRQSEI True PC9_epitope_Rep6 1019.52473793603 1019.52364993586 36.779 2 -0.522191178454234 0.15076092292587137 0.9612201136959445 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 101753 19278 SLNNGLVPV True PC9_epitope_Rep1 911.5076313199099 911.50652993586 78.955 2 -0.5221941001392288 0.15076092292587137 0.9612213505849166 ['ENSG00000188011|ENST00000343216|RTP5', 'ENST00000419912.1_1_2:242813297-242815423:+|nuORF'] 86846 7891 QLQKNADQVEK True H1975_Epitope_Rep1 1299.67827845531 1299.67718993586 35.304 2 -0.5222658037883606 0.15076092292587137 0.961251705827617 ['ENSG00000118898|ENST00000345988|PPL'] 47733 5751 IYDREGGSKS True NCI_RA007_Epitope_Rep3 1110.53055159246 1110.5294499358602 29.601 2 -0.522314812771559 0.15076092292587137 0.9612724530950576 ['MEIS1|p.D188Y|1|0.24|ENSG00000143995|chr2:66442980-66442980|G/T|missense_variant'] 14818 22120 DVRRIYKRR True NCI_RA007_Epitope_Rep5 1260.7527212385996 1260.75106490379 92.217 3 -0.5223267691842653 0.15076092292587137 0.9612775146366115 ['ENSG00000035681|ENST00000038176|NSMAF', 'nc|ENSG00000035681|Q92636-2|NSMAF', 'ENST00000519858.1_1_8:59513803-59535956:-|nuORF'] 101159 13179 SLGSLNSLACL True PC9_epitope_Rep1 1076.55359553616 1076.5524899358602 55.556 2 -0.5223703168348592 0.15076092292587137 0.9612959496680875 ['ENSG00000106100|ENST00000222823|NOD1', 'nc|ENSG00000106100|Q9Y239-3|NOD1', 'nc|ENSG00000106100|Q9Y239-2|NOD1'] 112939 16107 TLLKPTDSY True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 67.166 2 -0.5224354982519923 0.15079118325669683 0.9613235426175393 ['ENST00000568469.5_1_16:18995385-19051723:+|nuORF', 'ENSG00000170537|ENST00000304381|TMC7'] 108894 8202 TAAPRHLPK True NCI_RA007_Epitope_Rep1 989.5770482924099 989.57594993586 35.901 2 -0.5224577753306947 0.15080507919884803 0.9613329729973014 ['DLGAP3|p.A347Pfs*121|1|0.21|ENSG00000116544|chr1:34904345-34904345|C/-|frameshift_variant'] 35243 9830 GRARAWAWT True NCI_RA007_Epitope_Rep3 1073.5518961737298 1073.5507899358602 45.74 2 -0.5224939966498604 0.15081897468623698 0.9613483062134377 ['nc|ENSG00000167483|Q86XR2-6|NIBAN3', 'nc|ENSG00000167483|Q86XR2-5|NIBAN3', 'nc|ENSG00000167483|Q86XR2-7|NIBAN3', 'nc|ENSG00000167483|Q86XR2-4|NIBAN3', 'ENSG00000167483|ENST00000599164|NIBAN3', 'nc|ENSG00000167483|Q86XR2-3|NIBAN3', 'nc|ENSG00000167483|Q86XR2-2|NIBAN3', 'nc|ENSG00000167483|Q86XR2|NIBAN3'] 71236 21404 LYPGIVTFVI True PC9_epitope_Rep6 1120.65323292444 1120.65267496793 95.205 1 -0.5225687704230016 0.1508492325817325 0.9613799592396245 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1'] 98516 9596 SFLRCYRP True PC9_epitope_Rep4 1040.5225701913998 1040.52146993586 44.537 2 -0.5226419442813982 0.15086312689192505 0.9614109347886497 ['ENST00000392975.6_1_17:61511323-61511650:-|nuORF'] 19542 11840 ELPSSQNVSPA True H1975_Epitope_Rep1 1127.54586730343 1127.5447699358601 50.54 2 -0.5227396011320301 0.1509424700569409 0.9614522741980979 ['ENSG00000164309|ENST00000446378|CMYA5'] 93903 13886 RRFNKRHILHS True H1975_Epitope_Rep3 1462.83818219806 1462.8370899358601 58.722 2 -0.5227521025589535 0.15094895287958116 0.9614575662128998 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN', 'nc|ENSG00000130518|Q9H0B3-2|IQCN'] 63838 17462 LNKNQLTSL True PC9_epitope_Rep6 1029.5818588893299 1029.5807699358602 79.79 2 -0.5227541188579552 0.15094895287958116 0.9614584197383156 ['LRRIQ1|p.S1543Ifs*14|1|0.13|ENSG00000133640|chr12:85153747-85153748|-/ATCTTGAAAGGCAATAAAAGTC|frameshift_variant', 'nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF', 'LRRIQ1|p.G878C|1|0.79|ENSG00000133640|chr12:85066835-85066835|G/T|missense_variant'] 117803 10128 TVWNNWFYRRF True PC9_epitope_Rep5 1587.77351625283 1587.7718849037901 43.943 3 -0.5227631036812024 0.15094895287958116 0.9614622231305605 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 56601 14961 LDHPNLAEY True PC9_epitope_Rep5 1070.50327421546 1070.5021699358601 62.549 2 -0.5227659991715126 0.15094895287958116 0.9614634488293643 ['nc|ENSG00000167740|Q8WUJ1-3|CYB5D2', 'ENSG00000167740|ENST00000301391|CYB5D2'] 31133 20211 GAVRTLRTGP True PC9_epitope_Rep6 1026.5934266325398 1026.59232993586 90.417 2 -0.5227742599713112 0.15096284419430311 0.9614669457342255 ['ENSG00000140905|ENST00000315467|GCSH'] 99429 5504 SIADHVNSA True PC9_epitope_Rep1 912.4301092752 912.42900993586 26.001 2 -0.5228659340003479 0.15102581721802297 0.9615057526513239 ['ENSG00000136874|ENST00000259400|STX17'] 44120 12295 IIQFIRHWRQW True H1975_Epitope_Rep1 1581.8680853440098 1581.8669899358601 52.318 2 -0.5228945061415735 0.15103970682067308 0.9615178476998147 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 114143 11509 TPINQNVSL True PC9_epitope_Rep5 984.5240096600401 984.52290993586 49.266 2 -0.5229247120486152 0.1510511247443763 0.9615306343878909 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 141613 12032 YTRQERYRARP True PC9_epitope_Rep3 1494.7803925384198 1494.77875490379 51.314 3 -0.522946501015756 0.1510511247443763 0.9615398580677775 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 65447 6565 LRIEVEAVR True NCI_RA007_Epitope_Rep4 1083.64004247179 1083.6389499358602 31.866 2 -0.5229978109438713 0.15106501325131697 0.9615615786401642 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 79748 13247 PEAILNLQAL True PC9_epitope_Rep4 1080.61791004488 1080.6168099358601 58.854 2 -0.5230523545466305 0.1510927889019762 0.9615846683020092 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 73724 13262 MYTRKWRRRRR True H1975_Epitope_Rep1 1663.9429987031097 1663.9419099358602 56.111 2 -0.5230592789081344 0.1510927889019762 0.9615875995735195 ['ENST00000306085.10_3_7:100730337-100730388:+|nuORF'] 103511 10684 SPREPVNV True PC9_epitope_Rep6 896.4715801643599 896.47048993586 51.911 2 -0.523123520548196 0.15115575258878763 0.9616147950260375 ['ENST00000275364.7_1_7:2769482-2769623:-|nuORF'] 6856 7173 AQGRQKHS True PC9_epitope_Rep5 910.4733114998598 910.47220993586 32.557 2 -0.5231627188224436 0.15118599705545557 0.9616313890606808 ['OR6Y1|p.A242Hfs*9|1|0.23|ENSG00000197532|chr1:158547382-158547382|C/-|frameshift_variant'] 135144 19083 WEKFFMVTFIT True H1975_Epitope_Rep2 1447.7209952144294 1447.71988993586 79.214 2 -0.5232292919068252 0.15121624053262667 0.9616595722413075 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'ENST00000526482.1_1_14:92920194-92959969:+|nuORF', 'nc|ENSG00000140090|Q8NFF2-4|SLC24A4', 'nc|ENSG00000140090|Q8NFF2-2|SLC24A4'] 42151 9895 IDPDRVMRY True H1975_Epitope_Rep3 1163.57572796307 1163.57462993586 43.093 2 -0.5232484931338685 0.15123012497546293 0.961667701030636 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 106518 11203 STLPKSLSL True PC9_epitope_Rep1 944.55424715916 944.55314993586 47.974 2 -0.5232631767051974 0.15124400896406195 0.961673917315776 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 56778 15169 LDLWEFFCRKK True H1975_Epitope_Rep1 1483.7645913619097 1483.7634899358602 63.608 2 -0.5233842095938107 0.15125789249844604 0.9617251577658514 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'ENST00000476985.5_1_12:3921210-3931106:-|nuORF', 'nc|ENSG00000111224|Q9NR21-2|PARP11'] 69347 7554 LTVPHSPVD True H1975_Epitope_Rep3 963.50254593947 963.50144993586 34.038 2 -0.5234344046940969 0.15126930123004448 0.9617464090537559 ['ENST00000489288.6_1_12:2986423-2994675:+|nuORF', 'ENST00000461997.5_1_12:2986378-2997084:+|nuORF', 'ENST00000538636.5_3_12:2986404-2994675:+|nuORF'] 66242 9504 LSEYQDVNK True NCI_RA007_Epitope_Rep2 1094.5244035828598 1094.5233099358602 41.583 2 -0.523460093135473 0.15126930123004448 0.9617572850415724 ['nc|ENSG00000006740|Q17R89-2|ARHGAP44', 'nc|ENSG00000006740|Q17R89-3|ARHGAP44', 'ENSG00000006740|ENST00000379672|ARHGAP44', 'ENST00000538915.2_1_17:12853006-12862275:+|nuORF'] 122622 16945 VGFSGISSL True PC9_epitope_Rep1 865.45453311789 865.4539849679301 70.003 1 -0.523466070162332 0.15128070921521802 0.9617598156165612 ['ENST00000507953.1_1_4:38777992-38784603:-|nuORF'] 65152 9085 LQNSSAVSLP True H1975_Epitope_Rep3 1014.5345743437399 1014.53346993586 39.933 2 -0.5234697496116026 0.15128070921521802 0.9617613734383262 ['MAST4|p.P1887S|1|0.21|ENSG00000069020|chr5:67164838-67164838|C/T|missense_variant'] 16710 5614 EERVWEYPEGV True H1975_Epitope_Rep1 1391.6357449369898 1391.6346499358601 26.661 2 -0.5235232951234171 0.15128964197510672 0.9617840440779017 ['ENSG00000104142|ENST00000220509|VPS18', 'VPS18|p.D357Gfs*27|1|0.25|ENSG00000104142|chr15:40899884-40899885|-/G|frameshift_variant'] 85328 6451 QESPEKLDKK True NCI_RA007_Epitope_Rep1 1200.6350166609998 1200.6339099358602 29.115 2 -0.5235268546634775 0.15128964197510672 0.961785551172361 ['nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'nc|ENSG00000130856|Q9UL36-2|ZNF236'] 126400 4959 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 25.542 3 -0.5235577983463305 0.15128964197510672 0.9617986527103511 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 126389 5953 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 30.397 3 -0.5235829352299494 0.15130104836203653 0.9618092958033928 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 37630 16931 GVWEELGV True PC9_epitope_Rep1 887.4388830537498 887.43778993586 69.948 2 -0.5235989877597497 0.15130104836203653 0.9618160926043525 ['nc|ENSG00000101004|Q9Y2I6-2|NINL', 'ENSG00000101004|ENST00000278886|NINL', 'NINL|p.E1046Rfs*4|1|0.18|ENSG00000101004|chr20:25476155-25476155|C/-|frameshift_variant'] 135384 9816 WGWWRWWEHRL True NCI_RA007_Epitope_Rep1 1696.81638412432 1696.8152899358602 42.185 2 -0.5236110858314633 0.15132633369312792 0.96182121508658 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 66569 12389 LSIGSLDVLP True H1975_Epitope_Rep2 1012.580461907 1012.57936993586 52.741 2 -0.5236306525283859 0.15132633369312792 0.9618294999534188 ['ENST00000519610.1_1_5:150534942-150535005:-|nuORF'] 99216 23599 SHLRKLRKRLL True NCI_RA007_Epitope_Rep4 1418.9310199537397 1418.9299299358602 102.37 2 -0.5236353220364925 0.15132633369312792 0.9618314771143723 ['ENSG00000130203|ENST00000252486|APOE'] 46830 11301 ITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep2 1118.5277749905702 1118.52727496793 48.546 1 -0.5236971971308384 0.15134021292949776 0.9618576767296749 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 127970 11514 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 49.292 2 -0.5237725783912024 0.15137442153287656 0.9618895965245674 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 18778 6769 ELDDPGQPVS True PC9_epitope_Rep1 1055.4771190372699 1055.4760299358602 30.843 2 -0.5237895061503112 0.15137442153287656 0.9618967647006148 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 33757 18196 GLKIGDTV True PC9_epitope_Rep5 801.45961849833 801.45852993586 75.0 2 -0.523806890567076 0.15137442153287656 0.9619041263329979 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 79855 14996 PEKAVLAA True PC9_epitope_Rep5 797.4647038787699 797.4641549679301 62.685 1 -0.5238179217110166 0.15137442153287656 0.9619087976419459 ['HSD3B2|p.A161P|1|0.25|ENSG00000203859|chr1:119421982-119421982|G/C|missense_variant'] 133255 24044 VVTLLSNY True PC9_epitope_Rep2 907.50148331031 907.5009349679301 97.988 1 -0.5238196410392189 0.15137442153287656 0.9619095257211986 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 71626 12958 MDPFNHRIF True PC9_epitope_Rep4 1175.5545985956699 1175.5535099358601 57.734 2 -0.5238475397757171 0.15137442153287656 0.9619213400405032 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 102766 2083 SNHDRSSRRG True PC9_epitope_Rep3 1170.5602290113 1170.5585849037902 11.477 3 -0.5238608308585093 0.15140465055433822 0.9619269685135482 ['ENSG00000176194|ENST00000320477|CIDEA'] 96781 6382 SAPTPAPAA True PC9_epitope_Rep1 781.39701824177 781.39592993586 29.356 2 -0.5238647358436379 0.15141109912031134 0.9619286221962154 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 129479 26456 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 109.5 2 -0.5238656840480272 0.15141109912031134 0.9619290237423769 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 47360 17710 IVGQAGIGLSV True PC9_epitope_Rep1 1012.5916952970399 1012.59058993586 72.917 2 -0.5238718745858895 0.15141109912031134 0.9619316453215279 ['SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant'] 106328 21316 STFVSFLQKEK True PC9_epitope_Rep3 1312.7027022979998 1312.70160993586 87.287 2 -0.5238727651677311 0.15141109912031134 0.9619320224675167 ['ENST00000592859.1_1_19:9869411-9879277:-|nuORF', 'ENST00000589453.5_1_19:9875628-9879277:-|nuORF'] 23125 5880 EVKDVQLHLER True H1975_Epitope_Rep2 1364.7412130650398 1364.7395549037901 27.603 3 -0.5238805991948884 0.15142497424745335 0.9619353400524505 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 30247 17691 FYVMEHVQ True PC9_epitope_Rep4 1051.4797023199098 1051.47860993586 76.073 2 -0.5238907534671869 0.15143637285198083 0.9619396402511086 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-2|ACAD11', 'ENST00000471702.2_2_3:132339980-132400782:-|nuORF'] 45819 10432 ISDFGFAKMVP True NCI_RA007_Epitope_Rep1 1210.60563110902 1210.60452993586 44.562 2 -0.5239267903699706 0.15143637285198083 0.96195490164875 ['nc|ENSG00000139908|Q6SA08-3|TSSK4', 'nc|ENSG00000139908|Q6SA08|TSSK4', 'ENSG00000139908|ENST00000339917|TSSK4'] 76319 12590 NPSPYHLYY True H1975_Epitope_Rep2 1152.52400966004 1152.52290993586 53.525 2 -0.5239587998852454 0.15145024688532094 0.9619684578089335 ['ENSG00000020633|ENST00000308873|RUNX3', 'nc|ENSG00000020633|Q13761-2|RUNX3'] 102621 11935 SLWPPFRCRWK True H1975_Epitope_Rep3 1474.76559442142 1474.7644899358602 51.063 2 -0.5239835786129263 0.15145669162606676 0.9619789519233153 ['ENSG00000214711|ENST00000403897|CAPN14'] 128117 18514 VPLLGGLL True H1975_Epitope_Rep1 780.5109257952 780.51037496793 77.189 1 -0.5239967859149169 0.15145669162606676 0.9619845454687028 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant', 'HERC2|p.A1157G|1|0.12|ENSG00000128731|chr15:28245988-28245988|G/C|missense_variant'] 63782 7843 LNEVIVNKSHE True H1975_Epitope_Rep1 1280.6724647988801 1280.6713699358602 35.118 2 -0.524014041334033 0.15145669162606676 0.9619918535550478 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 81828 12374 PLPVPPPTG True PC9_epitope_Rep2 873.49600400705 873.49490993586 52.907 2 -0.5240398947572084 0.15145669162606676 0.9620028032881806 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 75418 8008 NIVLMKCQAK True NCI_RA007_Epitope_Rep1 1146.6253210077798 1146.62422993586 35.143 2 -0.5241231242791564 0.15148691287785898 0.9620380551459076 ['IL16|p.G222C|1|0.63|ENSG00000172349|chr15:81269637-81269637|G/T|missense_variant'] 85006 23246 QEGDVNFNLI True H1975_Epitope_Rep3 1147.55095268387 1147.54984993586 97.055 2 -0.5241528914056692 0.15150078472403872 0.9620506636051929 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 18078 11382 EIGWDSEALV True PC9_epitope_Rep1 1117.52915461013 1117.52804993586 48.661 2 -0.524207949831371 0.1515097023099181 0.9620739855576566 ['nc|ENSG00000164556|Q6ZVS7|CFAP144P1'] 17554 7221 EHGPENIVM-[Oxidation] True PC9_epitope_Rep1 1040.45969553176 1040.4585899358601 32.59 2 -0.5242104815204048 0.1515097023099181 0.9620750579718794 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 26439 18647 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.46017496793 76.515 1 -0.5242448938230225 0.1515097023099181 0.962089635141234 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 142418 8070 YYFCRWYRNRK True NCI_RA007_Epitope_Rep1 1653.7986854548496 1653.79702490379 35.389 3 -0.5243035887618563 0.15156022688265197 0.9621144995884406 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 133136 5549 VVQQPIQQP True PC9_epitope_Rep5 1035.5712942056298 1035.57018993586 26.349 2 -0.5243332944761465 0.15156022688265197 0.962127084100169 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 47269 11639 IVDFAKQLP True PC9_epitope_Rep3 1029.5858816406098 1029.58478993586 49.784 2 -0.5243355680329799 0.15156022688265197 0.9621280472833742 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3'] 103060 9841 SPGFELMEAPG True H1975_Epitope_Rep2 1133.5063109905698 1133.5052099358602 42.84 2 -0.5243439628726209 0.15156022688265197 0.9621316037419139 ['nc|ENSG00000198788|Q02817|MUC2'] 141616 13419 YTRQTDILQ True PC9_epitope_Rep4 1136.5825871653199 1136.5814899358602 59.516 2 -0.5243494626208217 0.15156022688265197 0.9621339337160715 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.G1552Hfs*13|1|0.14|ENSG00000151320|chr14:32822467-32822468|GG/-|frameshift_variant', 'AKAP6|p.P544Hfs*88|1|0.88|ENSG00000151320|chr14:32546283-32546283|C/-|frameshift_variant', 'nc|ENSG00000151320|Q13023-2|AKAP6', 'AKAP6|p.D1399Tfs*11|1|0.37|ENSG00000151320|chr14:32822007-32822007|G/-|frameshift_variant'] 47077 6075 ITSSLTSEEK True NCI_RA007_Epitope_Rep4 1093.5502839775302 1093.54918993586 29.984 2 -0.5243557365740541 0.15156022688265197 0.9621365916983857 ['ENSG00000175820|ENST00000322527|CCDC168'] 23876 12202 EYIRIQLP True H1975_Epitope_Rep2 1030.5811306133398 1030.58002993586 52.017 2 -0.5244026136920742 0.151604308668007 0.9621564518788037 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|10|1|sense'] 2258 9779 AENSKRLWLFY True H1975_Epitope_Rep1 1425.7404847890498 1425.7393899358601 42.544 2 -0.524481680859223 0.151604308668007 0.9621899520003828 ['ENST00000507425.5_1_4:16181029-16193070:-|nuORF'] 71149 7562 LYLQENRP True H1975_Epitope_Rep2 1031.53999407735 1031.5388899358602 34.04 2 -0.5245358976578158 0.15161817587446877 0.9622129248391762 ['NUAK1|p.D587Y|1|0.32|ENSG00000074590|chr12:106067029-106067029|C/A|missense_variant'] 97204 4221 SDYGIGEVP True NCI_RA007_Epitope_Rep2 935.4236269124299 935.42252993586 21.058 2 -0.5245789234116548 0.15164343036464378 0.9622311567567736 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 32681 5695 GGSAGAPPLGP True PC9_epitope_Rep2 879.4450310633499 879.44392993586 27.292 2 -0.5245819198307838 0.15164343036464378 0.9622324265047791 ['ENSG00000169676|ENST00000304374|DRD5'] 106299 15948 STFPQFIKA True PC9_epitope_Rep6 1037.5545815123298 1037.5534899358602 73.64 2 -0.5246574649774587 0.15164343036464378 0.9622644405781465 ['ENSG00000040487|ENST00000375153|SLC66A1'] 69077 8378 LTQTTHTDK True NCI_RA007_Epitope_Rep2 1043.52473793603 1043.52364993586 37.229 2 -0.5246863298117096 0.15166868237832185 0.9622766734858172 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 97364 8442 SEDLCEMALDP True H1975_Epitope_Rep2 1221.48934059709 1221.48824993586 37.422 2 -0.5247353727007692 0.15166868237832185 0.9622974588095502 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2', 'ENST00000521436.5_1_8:22474947-22476312:+|nuORF'] 141555 11982 YTNIQETYF True PC9_epitope_Rep1 1177.52915461013 1177.52804993586 50.951 2 -0.524752436384763 0.15166868237832185 0.9623046910172479 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 47787 6950 IYFFYNCQYSS True H1975_Epitope_Rep3 1433.59618862413 1433.5950899358602 31.695 2 -0.5249796309498493 0.1517642636507755 0.962400999209348 ['ENST00000373864.5_1_1:28339722-28384581:-|nuORF'] 85681 10090 QGSLKREER True H1975_Epitope_Rep3 1101.5890695280898 1101.5879699358602 43.852 2 -0.5250181225656749 0.15177564594943535 0.9624173187450614 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'ZCCHC2|p.G771Efs*17|1|0.09|ENSG00000141664|chr18:62574392-62574393|-/A|frameshift_variant', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2', 'ENST00000591632.5_1_18:60191431-60230292:+|nuORF'] 95437 3569 RWHELRRFWIR True NCI_RA007_Epitope_Rep3 1653.9116814914896 1653.9105899358601 19.889 2 -0.525024869935849 0.15177564594943535 0.9624201795597878 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 61581 23966 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 99.894 3 -0.5250521557982727 0.1517795862339445 0.9624317487551812 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 141085 6667 YSPSNGPP True NCI_RA007_Epitope_Rep5 817.3606327330499 817.35952993586 32.313 2 -0.5250681544202285 0.1517795862339445 0.9624385323698909 ['nc|ENSG00000129993|O75081-2|CBFA2T3', 'nc|ENSG00000129993|O75081-4|CBFA2T3', 'ENSG00000129993|ENST00000268679|CBFA2T3'] 101021 3487 SLGANPRRTPQ True NCI_RA007_Epitope_Rep5 1195.64216773011 1195.64053490379 19.22 3 -0.52510192192299 0.1517795862339445 0.9624528507119967 ['nc|ENSG00000204410|O43196-4|MSH5', 'ENSG00000204410|ENST00000375750|MSH5', 'nc|ENSG00000204410|O43196-2|MSH5', 'nc|ENSG00000204410|O43196-3|MSH5', 'ENST00000463094.5_1_6:31708243-31711078:+|nuORF', 'ENST00000482280.1_1_6:31708243-31713997:+|nuORF'] 119483 8583 VARPAPVAV True PC9_epitope_Rep2 878.5337864980999 878.53268993586 38.374 2 -0.5251400404129388 0.1517795862339445 0.9624690148144113 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 33283 6757 GKKSGFVN True NCI_RA007_Epitope_Rep3 835.45520182423 835.45410993586 33.668 2 -0.5251719156486532 0.1517795862339445 0.9624825321481466 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 17086 10994 EGKSEINLHPL True H1975_Epitope_Rep1 1235.65100107831 1235.64990993586 47.251 2 -0.525229526542314 0.15179096672985162 0.962506964784062 ['ENSG00000204406|ENST00000642680|MBD5'] 135913 24709 WPRRKRAVG True NCI_RA007_Epitope_Rep5 1124.6679289854799 1124.6673749679298 102.53 1 -0.5252619547637368 0.15179096672985162 0.9625207184156255 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 116498 17013 TTPVKITLT True PC9_epitope_Rep3 972.58554728744 972.58444993586 70.597 2 -0.5252713791400282 0.15180482703400494 0.9625247156558917 ['ENSG00000139970|ENST00000267484|RTN1'] 97418 9113 SEEATREP True H1975_Epitope_Rep2 917.4090394774499 917.40794993586 40.005 2 -0.5253104230883197 0.15184888641971275 0.9625412762900357 ['nc|ENSG00000133619|A5PL33-3|KRBA1', 'nc|ENSG00000133619|A5PL33-2|KRBA1', 'nc|ENSG00000133619|A5PL33|KRBA1', 'ENSG00000133619|ENST00000496259|KRBA1'] 122767 18391 VGGMNRRPI True PC9_epitope_Rep4 998.5443682651398 998.5432699358599 78.806 2 -0.5253104773687752 0.15184888641971275 0.9625412993139602 ['ENSG00000073282|ENST00000264731|TP63', 'nc|ENSG00000073282|Q9H3D4-11|TP63', 'ENST00000460036.1_1_3:189507541-189590785:+|nuORF', 'nc|ENSG00000073282|Q9H3D4-6|TP63', 'nc|ENSG00000073282|Q9H3D4-9|TP63', 'nc|ENSG00000073282|Q9H3D4-8|TP63', 'nc|ENSG00000073282|Q9H3D4-2|TP63', 'nc|ENSG00000073282|Q9H3D4-12|TP63', 'nc|ENSG00000073282|Q9H3D4-4|TP63', 'nc|ENSG00000073282|Q9H3D4-5|TP63', 'nc|ENSG00000073282|Q9H3D4-3|TP63', 'nc|ENSG00000073282|Q9H3D4-10|TP63', 'nc|ENSG00000073282|Q9H3D4-7|TP63', 'nc|ENSG00000078900|O15350-13|TP73', 'nc|ENSG00000078900|O15350-5|TP73', 'nc|ENSG00000078900|O15350-6|TP73', 'nc|ENSG00000078900|O15350-12|TP73', 'nc|ENSG00000078900|O15350-3|TP73', 'nc|ENSG00000078900|O15350-9|TP73', 'nc|ENSG00000078900|O15350-10|TP73', 'nc|ENSG00000078900|O15350-4|TP73', 'ENST00000603364.5_1_1:3607439-3646013:+|nuORF', 'nc|ENSG00000078900|O15350-2|TP73', 'nc|ENSG00000078900|O15350-11|TP73', 'nc|ENSG00000078900|O15350-8|TP73', 'ENSG00000078900|ENST00000378295|TP73'] 26115 13974 FGSHPLWNSL True PC9_epitope_Rep6 1156.56654317836 1156.5654499358602 65.61 2 -0.525320923723704 0.1518716402790713 0.9625457303374396 ['ENST00000368347.8_1_1:155293877-155294000:+|nuORF'] 65717 12381 LSCHVHMLVP True H1975_Epitope_Rep2 1134.56780613166 1134.5667099358602 52.71 2 -0.5253246108751627 0.1518716402790713 0.9625472943305737 ['ENST00000501855.6_1_5:180257966-180258903:+|nuORF'] 8679 7682 AVAKHQWVHR True PC9_epitope_Rep4 1230.67340828874 1230.67177490379 36.929 3 -0.5253265081525559 0.1518716402790713 0.9625480991093465 ['ENSG00000169951|ENST00000395091|ZNF764', 'nc|ENSG00000169951|Q96H86|ZNF764'] 135852 18120 WPFMYGDYIAY True H1975_Epitope_Rep1 1424.61111041228 1424.61000993586 75.495 2 -0.5253452645293998 0.1518716402790713 0.9625560552300124 ['ENSG00000175931|ENST00000319380|UBE2O', 'ENST00000586505.1_1_17:74398111-74401301:-|nuORF'] 66758 16277 LSLMDVMLV True PC9_epitope_Rep1 1019.5395256951499 1019.53842993586 67.429 2 -0.5254484525937205 0.15191569316232334 0.9625998298130749 ['ENSG00000177462|ENST00000641945|OR2T8'] 1409 4439 AEEESCREDVT True H1975_Epitope_Rep3 1266.5034104381 1266.50176490379 22.197 3 -0.5254513490379522 0.15191569316232334 0.962601058646441 ['ENSG00000090863|ENST00000422840|GLG1', 'nc|ENSG00000090863|Q92896-3|GLG1', 'nc|ENSG00000090863|Q92896-2|GLG1', 'GLG1|p.C190Yfs*35|1|0.08|ENSG00000090863|chr16:74503736-74503737|-/AT|frameshift_variant'] 140392 7234 YREMKDSDK True H1975_Epitope_Rep1 1170.5339227207398 1170.53282993586 32.836 2 -0.5254969606178848 0.15195477789214004 0.9626204103527363 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000557321.1_1_14:31583449-31583566:-|nuORF'] 103970 9488 SQANVVVKI True PC9_epitope_Rep6 956.5654805492 956.56438993586 46.748 2 -0.5255011985210812 0.15195477789214004 0.9626222084452188 ['ENSG00000100219|ENST00000344347|XBP1'] 94144 20257 RRMRRRNRHQR True NCI_RA007_Epitope_Rep1 1620.9192435667599 1620.91759490379 83.001 3 -0.5255447320324665 0.15195477789214004 0.962640679893708 ['ENST00000541683.1_1_11:61582434-61582803:-|nuORF'] 119015 11569 VAFCYSSL True PC9_epitope_Rep3 888.4051403973199 888.40404993586 49.515 2 -0.5255545333069254 0.15195477789214004 0.9626448387895334 ['TAAR6|p.D112E|1|0.16|ENSG00000146383|chr6:132570657-132570657|T/A|missense_variant', 'ENSG00000146383|ENST00000275198|TAAR6'] 125089 7734 VIEHPEYGEVI True PC9_epitope_Rep1 1283.6397676882698 1283.63812490379 34.57 3 -0.5255785704323502 0.1519686325763764 0.962655038542675 ['ENST00000487533.1_1_2:9411463-9411580:-|nuORF', 'ENST00000462917.1_1_17:39846204-39847075:+|nuORF', 'ENST00000310837.8_1_17:39845180-39847075:+|nuORF', 'ENST00000488260.1_1_3:40351432-40353086:+|nuORF', 'ENSG00000173812|ENST00000469257|EIF1', 'ENSG00000114784|ENST00000232905|EIF1B'] 42382 15582 IEDDALNGAI True PC9_epitope_Rep2 1029.4978544818498 1029.4967499358602 65.21 2 -0.5256798393255778 0.1519988237408309 0.9626980146176214 ['ENST00000511499.5_1_4:175413109-175416797:-|nuORF', 'nc|ENSG00000164120|P15428-3|HPGD', 'nc|ENSG00000164120|P15428-5|HPGD', 'ENSG00000164120|ENST00000296522|HPGD'] 106098 6673 STDDFKSKYES True H1975_Epitope_Rep2 1305.57247597409 1305.57136993586 30.577 2 -0.5258366001538677 0.15201019391305767 0.962764554166414 ['KRT40|p.A170S|1|0.29|ENSG00000204889|chr17:40983068-40983068|C/A|missense_variant'] 39585 10977 HLIQRWFE True PC9_epitope_Rep4 1127.58761297611 1127.58595490379 49.997 3 -0.5258516860422237 0.15201019391305767 0.9627709585222238 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000535934.2_1_12:133252319-133252454:-|nuORF'] 93841 25130 RRCRRRLREAR True PC9_epitope_Rep3 1526.89129748342 1526.8902099358602 102.01 2 -0.5258732619351282 0.15201907997909042 0.9627801183395319 ['ENST00000456859.2_1_12:57066766-57082127:-|nuORF'] 9884 15218 AYLKAIVLF True NCI_RA007_Epitope_Rep3 1036.6321035570397 1036.6310099358602 67.382 2 -0.5258852528580745 0.15201907997909042 0.9627852091042258 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 26925 16976 FLDILYTTV True PC9_epitope_Rep2 1083.5852129342702 1083.5841099358602 70.545 2 -0.525920496304934 0.15201907997909042 0.9628001723665931 ['ENSG00000196099|ENST00000309154|OR6M1', 'OR6M1|p.I75T|1|0.21|ENSG00000196099|chr11:123806126-123806126|A/G|missense_variant'] 58024 6504 LEHQRDRTI True NCI_RA007_Epitope_Rep1 1166.6156186290998 1166.61397490379 29.315 3 -0.5260009379225477 0.15204678362573099 0.9628343287571092 ['ENST00000464735.1_1_13:24164310-24168479:+|nuORF'] 138828 20892 YIYILITILKM True NCI_RA007_Epitope_Rep2 1382.8247320069797 1382.82307490379 86.418 3 -0.5260112147436014 0.15204678362573099 0.962838692751624 ['ENSG00000183303|ENST00000329434|OR5P2', 'ENSG00000182334|ENST00000641167|OR5P3'] 117113 17117 TVKDNSLL True PC9_epitope_Rep2 888.4916469026 888.49054993586 71.089 2 -0.5260239762826151 0.15205815093106828 0.9628441119769575 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4', 'FRMPD4|p.S1105Kfs*31|1|0.55|ENSG00000169933|chrX:12718133-12718134|-/A|frameshift_variant', 'FRMPD4|p.Q347Afs*52|1|0.23|ENSG00000169933|chrX:12701975-12701976|-/A|frameshift_variant', 'FRMPD4|p.A947Qfs*130|1|0.11|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant'] 127572 11162 VNSYFDSFL True NCI_RA007_Epitope_Rep5 1090.49712620586 1090.4960299358602 49.571 2 -0.5260462413322254 0.15205815093106828 0.962853567186926 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 61574 23816 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 98.112 3 -0.526052160317172 0.15207200143741526 0.9628560808410622 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 86698 17186 QLKAAVTP True PC9_epitope_Rep6 826.4912529797799 826.49070496793 78.695 1 -0.5260854708308017 0.15208585149129397 0.962870227525864 ['ENSG00000186532|ENST00000305513|SMYD4'] 101125 8646 SLGNMEIPV True H1975_Epitope_Rep3 958.4793679667399 958.47826993586 38.253 2 -0.52616057712199 0.15211603482351405 0.9629021275947017 ['ENST00000537296.5_1_11:18424524-18425261:+|nuORF'] 6613 13352 APVVRARA True PC9_epitope_Rep3 838.5137197598599 838.51262993586 56.393 2 -0.5262246311088576 0.15214621716973736 0.9629293368063364 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44'] 61575 23902 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 98.451 3 -0.5262606737174463 0.15215758011302388 0.9629446485858107 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 127527 14730 VNQDLNNNL True PC9_epitope_Rep6 1042.5043368446202 1042.5032299358602 68.609 2 -0.5262696099683388 0.15215758011302388 0.9629484450801256 ['HERPUD1|p.P332L|1|0.61|ENSG00000051108|chr16:56942221-56942221|C/T|missense_variant'] 123347 14202 VGLTLEEAI True PC9_epitope_Rep3 943.52261267771 943.52150993586 59.714 2 -0.5263211204025392 0.15218527471091658 0.9629703300971755 ['ENSG00000086504|ENST00000199706|MRPL28'] 33148 7527 GITGWRDLPS True NCI_RA007_Epitope_Rep2 1100.56145779792 1100.56036993586 33.904 2 -0.5263235515415009 0.15218527471091658 0.9629713630564919 ['MTIF2|p.F659Ifs*2|1|0.28|ENSG00000085760|chr2:55237324-55237325|-/T|frameshift_variant', 'ENSG00000085760|ENST00000263629|MTIF2'] 118863 12196 VAATRPQLTTG True PC9_epitope_Rep1 1113.61422164677 1113.6131299358601 51.77 2 -0.5263648651683405 0.15221545346159499 0.96298891739663 ['ENST00000443602.2_1:149673167-149673347:+|nuORF'] 69365 6367 LTVTGAVPVA True H1975_Epitope_Rep3 926.54368247546 926.54258993586 29.474 2 -0.5264073007135425 0.15222929936305732 0.9630069498638819 ['ENSG00000197110|ENST00000413851|IFNL3', 'ENSG00000183709|ENST00000331982|IFNL2'] 91711 3977 RKCRGCGV True PC9_epitope_Rep3 877.4374606684497 877.43636993586 20.406 2 -0.5264227433056464 0.15225450329070925 0.9630135123642234 ['ENST00000487996.5_1_6:32903880-32904018:-|nuORF'] 97425 5648 SEEDTLTLVTA True H1975_Epitope_Rep3 1177.57141334493 1177.57030993586 26.755 2 -0.5264255843450448 0.15225450329070925 0.9630147197163026 ['ENSG00000163295|ENST00000295463|ALPI'] 45591 10514 IQVKNHFNV True PC9_epitope_Rep4 1097.59817765981 1097.5970899358601 48.164 2 -0.5264304880070518 0.15225450329070925 0.9630168036332393 ['nc|ENSG00000221955|A0AV02-2|SLC12A8'] 47056 15218 ITSELSTTII True PC9_epitope_Rep6 1076.59650589396 1076.59540993586 70.632 2 -0.5264460056210815 0.15227224481131305 0.9630233983062665 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF'] 87149 17685 QPFASFKTI True PC9_epitope_Rep2 1037.5545815123298 1037.5534899358602 73.307 2 -0.5264541738263652 0.15227224481131305 0.9630268697072316 ['ENST00000370920.7_1_1:71530480-71530570:-|nuORF'] 76341 15574 NPTQLNTVEFL True PC9_epitope_Rep6 1274.65066672514 1274.6495699358602 72.115 2 -0.5264644490730409 0.15227224481131305 0.9630312366555381 ['nc|ENSG00000135457|Q12800-2|TFCP2', 'nc|ENSG00000135457|Q12800-3|TFCP2', 'nc|ENSG00000135457|Q12800-4|TFCP2', 'ENSG00000135457|ENST00000257915|TFCP2'] 78131 14771 NWRRVYKSL True PC9_epitope_Rep4 1220.6778249628396 1220.67672993586 64.749 2 -0.5264649645223103 0.15227224481131305 0.9630314557221589 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 136578 9253 WWHRRTHFWRT True H1975_Epitope_Rep1 1667.8334311707897 1667.83177490379 40.503 3 -0.5264895804885227 0.15227224481131305 0.9630419177925855 ['ENST00000322893.11_1_14:63483627-63512140:-|nuORF'] 28686 14764 FSQEVSRRSWG True H1975_Epitope_Rep1 1337.6476470333698 1337.64654993586 62.013 2 -0.526508590295289 0.15227224481131305 0.9630499975195136 ['nc|ENSG00000079691|Q5VZK9-2|CARMIL1', 'ENSG00000079691|ENST00000329474|CARMIL1'] 65722 20102 LSCLFQHGSIL True PC9_epitope_Rep5 1216.6274291827601 1216.6263299358602 82.369 2 -0.5265440806245366 0.1522860875244938 0.963065082748115 ['STK36|p.S945F|1|0.26|ENSG00000163482|chr2:218697535-218697535|C/T|missense_variant'] 61040 11519 LIFLDSRLHTP True H1975_Epitope_Rep3 1310.73467113262 1310.73356993586 49.433 2 -0.5265707498897387 0.15229992978560114 0.9630764192523394 ['ENSG00000178358|ENST00000317834|OR2D3'] 25246 12620 FDIQLLTHN True PC9_epitope_Rep3 1099.56620882519 1099.5651099358602 53.566 2 -0.5267715189812971 0.15235778198680688 0.9631617808513239 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 37791 7409 GYDNPSFLR True H1975_Epitope_Rep3 1067.50360856863 1067.5025099358602 33.476 2 -0.5268226205989326 0.15235778198680688 0.963183513379539 ['ENSG00000186908|ENST00000426126|ZDHHC17'] 131242 23468 VTFAFSCT True H1975_Epitope_Rep3 874.38949033318 874.38894496793 97.939 1 -0.5268515138838697 0.15235778198680688 0.9631958021385888 ['ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A', 'nc|ENSG00000188092|B7ZAQ6-4|GPR89A', 'ENST00000532574.5_1_1:145811866-145826998:-|nuORF'] 37986 5832 HAIESLLQ True NCI_RA007_Epitope_Rep2 909.49198125577 909.49088993586 27.303 2 -0.5268762845502689 0.15236664652962595 0.9632063380658933 ['SEC22A|p.S256Ffs*16|1|0.09|ENSG00000121542|chr3:123271564-123271565|TC/-|frameshift_variant', 'ENSG00000121542|ENST00000492595|SEC22A'] 67831 6704 LTAIGDKN True PC9_epitope_Rep1 830.44978209062 830.44868993586 30.591 2 -0.5268771489848237 0.15236664652962595 0.9632067057532356 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 84610 5679 QDCFLCGFR True PC9_epitope_Rep1 1087.4579213295099 1087.45682993586 26.667 2 -0.5269394160898053 0.15236664652962595 0.9632331928078882 ['ENST00000297954.8_1_9:96070838-96080353:+|nuORF'] 26059 15897 FGKAFSTFSI True PC9_epitope_Rep1 1103.56514619603 1103.56404993586 65.958 2 -0.5269543558842646 0.1523968129571578 0.9632395483784738 ['ZNF208|p.C1230F|1|0.23|ENSG00000160321|chr19:21971345-21971345|C/A|missense_variant'] 122727 15890 VGGIQNLI True PC9_epitope_Rep4 812.4756029156399 812.4745099358599 69.051 2 -0.527041976601431 0.15242448979591836 0.9632768273202913 ['nc|ENSG00000165887|Q9GZV1-2|ANKRD2', 'ENSG00000165887|ENST00000370655|ANKRD2', 'nc|ENSG00000165887|Q9GZV1|ANKRD2'] 106575 13513 STNFATRRWIE True PC9_epitope_Rep2 1379.6945972257897 1379.6935099358602 57.264 2 -0.5270580021681249 0.15242448979591836 0.9632836462754856 ['ENSG00000066135|ENST00000372396|KDM4A'] 66792 16342 LSLSSETKPKL True PC9_epitope_Rep3 1201.69180326113 1201.69015490379 67.993 3 -0.5270795841355075 0.1524383275375096 0.9632928298740926 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF'] 7815 10106 ASVISPASTP True H1975_Epitope_Rep2 928.4865615221601 928.48601496793 43.867 1 -0.527098581471858 0.15245216482727095 0.963300914006754 ['TNKS|p.L976V|1|0.06|ENSG00000173273|chr8:9751702-9751702|C/G|missense_variant'] 97612 6058 SEEYAWVP True NCI_RA007_Epitope_Rep2 979.4287122928698 979.42760993586 28.168 2 -0.5271290036732965 0.15250750946846023 0.9633138605675856 ['ENST00000376310.7_1_X:49035948-49042786:-|nuORF', 'nc|ENSG00000012211|O43900-2|PRICKLE3', 'ENSG00000012211|ENST00000599218|PRICKLE3'] 127987 19474 VPHNPYATL True PC9_epitope_Rep2 1010.51853035678 1010.51742993586 80.286 2 -0.5271628753424523 0.15250750946846023 0.9633282760943871 ['nc|ENSG00000114541|Q9Y2L6-2|FRMD4B', 'ENSG00000114541|ENST00000398540|FRMD4B'] 29874 12758 FVTPADVVS True NCI_RA007_Epitope_Rep3 933.4807478657299 933.47964993586 57.419 2 -0.5271759024288933 0.15250750946846023 0.9633338206059763 ['nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'ENSG00000120756|ENST00000457734|PLS1'] 33753 17776 GLKIGDTV True PC9_epitope_Rep2 801.45961849833 801.45852993586 73.664 2 -0.5271994874883672 0.15250750946846023 0.9633438591397114 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 89369 15610 QWTSRKRK True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 68.994 2 -0.5272561509147489 0.15251885468020504 0.9633679789712506 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 142494 9038 YYIFESYYFPM True H1975_Epitope_Rep2 1521.6526408710897 1521.6515499358602 39.718 2 -0.5272580977767135 0.15251885468020504 0.9633688077423046 ['CON__Q2TBQ1'] 46410 4689 ISSNNSNPK True NCI_RA007_Epitope_Rep5 959.46722305991 959.46612993586 24.723 2 -0.5272708011897748 0.1525326890742585 0.9633742156199128 ['nc|ENSG00000170956|P40198-2|CEACAM3'] 119192 9558 VAKKKEAP True PC9_epitope_Rep1 869.5334521449298 869.53234993586 41.623 2 -0.5273027573661495 0.1525628468821417 0.9633878201235138 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 13105 18586 DLQPYKYAGYP True PC9_epitope_Rep1 1313.62920300457 1313.62810993586 76.279 2 -0.5273561450890938 0.15259300370545698 0.9634105507032107 ['ENSG00000138246|ENST00000260818|DNAJC13'] 83877 7691 PVPGNKVWNI True NCI_RA007_Epitope_Rep4 1122.61857875122 1122.61693490379 36.246 3 -0.527468176113637 0.152618177069731 0.9634582583707517 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 66617 6130 LSKAVHKAVL True NCI_RA007_Epitope_Rep4 1064.6706143240801 1064.66950993586 30.192 2 -0.527472807716191 0.152618177069731 0.9634602309689899 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1'] 53601 13302 KRRRQEWERQY True H1975_Epitope_Rep1 1633.85495446101 1633.8538499358601 56.271 2 -0.5274829123005689 0.152618177069731 0.9634645345810995 ['ENSG00000159450|ENST00000614923|TCHH'] 94214 19342 RRPRRKRAHPA True NCI_RA007_Epitope_Rep3 1399.84974994127 1399.84864993586 84.437 2 -0.527487879394537 0.1526320084877173 0.9634666501371018 ['ENST00000460758.1_1_3:48511100-48514492:-|nuORF'] 98167 9664 SESSEEEEEP True H1975_Epitope_Rep3 1150.41497227318 1150.41386993586 42.191 2 -0.5275579923339354 0.15267848398785624 0.9634965148109718 ['ENSG00000083168|ENST00000265713|KAT6A'] 135988 22824 WQPWWWWIWWQ True PC9_epitope_Rep3 1786.8197381692598 1786.81864993586 93.063 2 -0.5275901441144668 0.15268982176666449 0.9635102115105526 ['chr12:54282841-54283827|531|24.4|0.0|21.22|+|1|HNRNPA1,HNRNPA1|1'] 47635 13012 IWEEAYQR True H1975_Epitope_Rep1 1093.5192586327698 1093.5186749679299 55.133 1 -0.5276258442147793 0.15268982176666449 0.9635254209995054 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 27987 11753 FQKSLNDSIQP True PC9_epitope_Rep2 1275.64591569787 1275.6448099358602 50.54 2 -0.5277275850860865 0.15275261551518712 0.9635687731552345 ['ENSG00000164438|ENST00000296921|TLX3'] 18200 6340 EILSQNYSV True NCI_RA007_Epitope_Rep3 1051.5185899264302 1051.51748993586 31.944 2 -0.527752728878422 0.15278027125393742 0.9635794886257831 ['ENST00000587966.2_1_19:334309-344774:-|nuORF', 'ENST00000586994.7_1_19:327127-336164:-|nuORF', 'ENSG00000105556|ENST00000264819|MIER2'] 126397 4390 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 23.239 3 -0.5277669263396819 0.15278027125393742 0.9635855394080635 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 39638 15082 HLPEECSL True PC9_epitope_Rep1 926.41676771018 926.41566993586 62.831 2 -0.5278016394250852 0.15281041911476695 0.9636003345613452 ['RFTN2|p.R451S|1|0.11|ENSG00000162944|chr2:197572163-197572163|G/T|missense_variant'] 96533 10329 SADRGLVL True PC9_epitope_Rep6 829.46576650793 829.46466993586 50.429 2 -0.5278610054198051 0.15285439174853935 0.9636256399586768 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 10923 4769 DADREVSSL True PC9_epitope_Rep3 990.4618033262999 990.46070993586 23.436 2 -0.5278689961176081 0.15285439174853935 0.9636290463575047 ['ENSG00000177354|ENST00000374144|C10orf71', 'nc|ENSG00000177354|Q711Q0-3|CEFIP'] 66020 9707 LSEEHPLSL True PC9_epitope_Rep5 1023.52367530687 1023.5225699358599 42.306 2 -0.5278766693153296 0.15286572230563353 0.9636323174696617 ['ENST00000513750.5_1_11:67067055-67069800:+|nuORF', 'ENST00000512231.5_1_11:67066841-67069800:+|nuORF', 'nc|ENSG00000172932|Q6ZTN6-1|ANKRD13D', 'ENSG00000172932|ENST00000511455|ANKRD13D', 'ENST00000507915.1_1_11:67067469-67068955:+|nuORF', 'nc|ENSG00000172932|Q6ZTN6-2|ANKRD13D'] 81830 12853 PLPVPPPTG True PC9_epitope_Rep2 873.49600400705 873.49490993586 54.739 2 -0.5278890220532155 0.15286572230563353 0.963637583615042 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 57045 9110 LDRYGRTVL True PC9_epitope_Rep4 1091.60874234351 1091.60764993586 42.628 2 -0.5278984939197919 0.15287705212311106 0.9636416217118715 ['POTEM|p.V346Ffs*7|1|0.11|ENSG00000222036|chr14:18977584-18977584|G/-|frameshift_variant', 'ENSG00000222036|ENST00000547889|POTEM'] 81398 7581 PLEAEFQRLP True NCI_RA007_Epitope_Rep1 1198.6346227381798 1198.63297490379 33.482 3 -0.5278986930085918 0.15287705212311106 0.9636417065894741 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 94492 20731 RRRRRRRRRRK True PC9_epitope_Rep3 1707.1166379336998 1707.1150049037901 85.01 3 -0.527965736763597 0.1529210182767624 0.9636702917300524 ['ENSG00000229674|ENST00000448797|H2AL3'] 78949 7434 PAHGSHTP True PC9_epitope_Rep3 802.3722004762601 802.37110993586 33.6 2 -0.5279907064590461 0.1529210182767624 0.9636809391493382 ['nc|ENSG00000180525|Q8N8Z3|DIP2C-AS1'] 80599 12955 PGQLKILTG True PC9_epitope_Rep3 925.55966689277 925.55856993586 54.854 2 -0.528030407895093 0.152948663555367 0.963697869738356 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 18065 13370 EIGLLKQLNHP True PC9_epitope_Rep2 1260.7190210684798 1260.7179299358602 56.705 2 -0.5280330894896279 0.152948663555367 0.9636990133585243 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6'] 3730 10476 AGSGTCRLRRS True PC9_epitope_Rep5 1162.5989230191399 1162.59782993586 45.283 2 -0.5280527202858704 0.15296248551800662 0.9637073855407211 ['ENST00000539131.1_1_12:15095331-15095634:-|nuORF'] 14931 5721 DYEARHSAGS True NCI_RA007_Epitope_Rep2 1091.46320030863 1091.46210993586 26.87 2 -0.5280936900057703 0.1530089419750669 0.9637248597129123 ['ENST00000488653.6_1_3:123680081-123680240:-|nuORF'] 42277 22657 IDTPPCPWI True PC9_epitope_Rep1 1040.50010341132 1040.4990099358602 91.955 2 -0.5281088268535669 0.1530227625030595 0.9637313162491848 ['ENSG00000152672|ENST00000272367|CLEC4F'] 72142 15614 MFVFKDRWFWR True PC9_epitope_Rep6 1616.8074592333996 1616.8063699358602 72.263 2 -0.5281348260603329 0.15303658258003458 0.9637424066368063 ['ENSG00000125966|ENST00000246186|MMP24'] 23548 12496 EVWHYECIP True PC9_epitope_Rep1 1174.51173072418 1174.5106299358602 52.934 2 -0.5282407406687709 0.15305040220601432 0.9637875938002285 ['ENSG00000178409|ENST00000369042|BEND3'] 15830 7027 EDEIQHQAP True H1975_Epitope_Rep3 1065.4727023631701 1065.4716099358602 31.992 2 -0.5283143970535941 0.15305922662750857 0.9638190256103115 ['OPHN1|p.T618A|1|0.48|ENSG00000079482|chrX:68064160-68064160|T/C|missense_variant'] 43897 18464 IHYMTEQAP True PC9_epitope_Rep1 1088.49608066004 1088.49498993586 75.813 2 -0.5283400035068744 0.15305922662750857 0.9638299541997467 ['ENST00000504824.5_1_5:218488-235547:+|nuORF', 'ENSG00000073578|ENST00000264932|SDHA', 'ENST00000505555.5_1_5:218470-251793:+|nuORF'] 27085 17080 FLGMHPDLS True PC9_epitope_Rep5 1015.47970231991 1015.47860993586 70.717 2 -0.5283452734250697 0.15305922662750857 0.963832203440598 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1'] 18214 16381 EIMSSTNTMP True PC9_epitope_Rep5 1109.47329661013 1109.4721899358601 68.006 2 -0.5284195766407622 0.15307304498213442 0.963863919905853 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 5328 11127 ALRGARRGV True PC9_epitope_Rep5 954.5835306551799 954.58242993586 47.791 2 -0.528447913494269 0.15308186771951576 0.9638760171719651 ['ENST00000436163.2_X:117250221-117250470:-|nuORF'] 94215 20001 RRPRRKRAHPA True NCI_RA007_Epitope_Rep4 1399.84974994127 1399.84864993586 86.498 2 -0.5284483335213079 0.15308186771951576 0.963876196492204 ['ENST00000460758.1_1_3:48511100-48514492:-|nuORF'] 89376 20029 QWTSRKRK True PC9_epitope_Rep6 1088.6203100867199 1088.61920993586 89.708 2 -0.5284706982676308 0.15308186771951576 0.9638857448591635 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 53602 13748 KRRRQEWERQY True NCI_RA007_Epitope_Rep1 1633.85495446101 1633.8538499358601 57.492 2 -0.5285169039751283 0.1531095014356565 0.9639054736374459 ['ENSG00000159450|ENST00000614923|TCHH'] 66033 11718 LSEEWEELLVE True NCI_RA007_Epitope_Rep2 1374.6554773220598 1374.65438993586 50.175 2 -0.5285261340867019 0.1531095014356565 0.9639094149739753 ['nc|ENSG00000187867|A6NDB9|PALM3', 'ENSG00000187867|ENST00000669674|PALM3'] 98094 5564 SERTGERVSP True H1975_Epitope_Rep3 1116.5523496662 1116.5512499358601 26.443 2 -0.5286223581259841 0.1531371333485595 0.9639505092605338 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 81833 11876 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 53.456 2 -0.528626960867892 0.1531371333485595 0.9639524752146464 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 33547 13469 GLEIGSLLLP True NCI_RA007_Epitope_Rep4 1010.6011973515799 1010.60010993586 59.012 2 -0.5286903431088331 0.1531647634584013 0.9639795499578945 ['ENSG00000164897|ENST00000297533|TMUB1'] 69652 11389 LVDRYFTRWYK True H1975_Epitope_Rep1 1545.8092330552097 1545.80812993586 48.787 2 -0.5287305698050697 0.1531647634584013 0.9639967358618352 ['ENST00000466200.1_1_9:111696724-111697970:+|nuORF', 'ENSG00000119328|ENST00000322940|ABITRAM'] 19261 7923 ELKFCFQYLNR True PC9_epitope_Rep2 1459.7282058531898 1459.72654490379 35.841 3 -0.5287364919102764 0.1531760790838798 0.9639992661008577 ['PADI2|p.V337F|1|0.13|ENSG00000117115|chr1:17083767-17083767|C/A|missense_variant'] 131556 16434 VTLDNVTL True PC9_epitope_Rep5 873.48074786573 873.47964993586 68.212 2 -0.5287519029727573 0.1531760790838798 0.9640058507209163 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 125297 6615 VIMTWRVCITL True NCI_RA007_Epitope_Rep3 1333.72503504905 1333.72339490379 33.08 3 -0.5288618986857525 0.153238830073569 0.9640528562599859 ['ENSG00000221970|ENST00000641044|OR2A1', 'ENSG00000212807|ENST00000641810|OR2A42'] 133329 19032 VVVARALRGRG True NCI_RA007_Epitope_Rep1 1152.7203584811598 1152.7192699358602 78.171 2 -0.529034996438781 0.15329407734842676 0.9641268570806287 ['ENSG00000243477|ENST00000443094|NAA80', 'nc|ENSG00000243477|Q93015-2|NAA80'] 126319 9789 VLIGYWRL True PC9_epitope_Rep2 1018.59638675466 1018.59528993586 42.99 2 -0.5290609269048276 0.15329407734842676 0.964137945709077 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|452|3|anti-sense'] 92731 8626 RNWKKRWFVL True NCI_RA007_Epitope_Rep5 1431.8251579028697 1431.82351490379 39.855 3 -0.5290659451243866 0.15329407734842676 0.9641400917419348 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 115937 5081 TSGQQKPHP True NCI_RA007_Epitope_Rep5 978.4882928576599 978.48718993586 26.244 2 -0.5290752340204425 0.15329407734842676 0.964144064203482 ['ENSG00000149346|ENST00000334534|SLX4IP'] 80249 3833 PGASPRKKPR True NCI_RA007_Epitope_Rep2 1092.651610215 1092.65050993586 19.544 2 -0.5290826671135148 0.15330788804071246 0.9641472430939956 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130', 'nc|ENSG00000136715|Q9H0E3-2|SAP130'] 40868 11517 HSEVETDSKKK True NCI_RA007_Epitope_Rep2 1286.64664397386 1286.6455499358601 49.389 2 -0.5291223151942434 0.153338009101437 0.9641642004259251 ['ENSG00000145220|ENST00000343470|LYAR'] 126905 13067 VLQQSVLSV True PC9_epitope_Rep6 971.5651461960299 971.56404993586 61.869 2 -0.5292317397326756 0.1533493174144933 0.9642110109630849 ['ENST00000522380.2_1_5:170346486-170397534:+|nuORF'] 6449 8421 APSEVAAIAP True H1975_Epitope_Rep2 924.4916469025998 924.49054993586 37.343 2 -0.5292408851209579 0.1533493174144933 0.9642149239279106 ['nc|ENSG00000180329|Q96MW1-2|CCDC43', 'ENSG00000180329|ENST00000315286|CCDC43'] 115850 6633 TSDWYMNGNY True H1975_Epitope_Rep2 1249.47098811101 1249.46988993586 30.422 2 -0.5292643716741332 0.1533794363256785 0.9642249734130839 ['ENSG00000188338|ENST00000614032|SLC38A3'] 59545 17137 LFSTAFSE True H1975_Epitope_Rep3 900.42289863644 900.42180993586 71.548 2 -0.5292990130436995 0.1533907427341227 0.9642397971130527 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3', 'nc|ENSG00000090565|O75154-2|RAB11FIP3'] 30287 13773 GAAELEPEL True PC9_epitope_Rep2 927.4549270407099 927.45382993586 58.263 2 -0.5293334023730983 0.1533907427341227 0.9642545144562207 ['ENST00000528902.1_1_17:72960370-72968856:-|nuORF'] 133331 18718 VVVARALRGRG True NCI_RA007_Epitope_Rep5 1152.7203584811598 1152.7192699358602 78.82 2 -0.5294138028307783 0.153420859496045 0.9642889286887993 ['ENSG00000243477|ENST00000443094|NAA80', 'nc|ENSG00000243477|Q93015-2|NAA80'] 131978 8115 VTSFQDRL True PC9_epitope_Rep1 964.4977949121999 964.49668993586 36.041 2 -0.529464627213953 0.15343466631874225 0.964310687576124 ['ENSG00000164715|ENST00000297293|LMTK2'] 99474 13195 SICRANCLRYL True PC9_epitope_Rep1 1310.65874639438 1310.65711490379 55.617 3 -0.5295323067669818 0.1534484726910971 0.9643396676455585 ['ENSG00000185972|ENST00000335119|CCIN'] 23221 13153 EVMEFDPLAP True PC9_epitope_Rep2 1146.52671208198 1146.52560993586 55.864 2 -0.5295543679809303 0.15345977592589571 0.9643491154363272 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 64865 7108 LQDSCFLQIK True PC9_epitope_Rep6 1193.6114447654497 1193.61034993586 36.386 2 -0.5295800575990635 0.15345977592589571 0.9643601179015469 ['ENSG00000102699|ENST00000381989|PARP4'] 18381 9927 EITALKLCEGH True PC9_epitope_Rep2 1212.61725842188 1212.6161699358602 43.516 2 -0.529644101358948 0.15348988910632747 0.9643875506059394 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'nc|ENSG00000100784|O75582-3|RPS6KA5'] 68709 16507 LTKQCVLI True PC9_epitope_Rep4 916.5415743004799 916.54046993586 71.464 2 -0.5298791618074629 0.15358022275492067 0.9644882836711174 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 92792 9241 RPALFSSSA True PC9_epitope_Rep2 934.4872302285 934.48612993586 40.884 2 -0.5298801669149996 0.15358022275492067 0.9644887145599428 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5', 'ENST00000489842.1_1_9:135931263-135933364:+|nuORF'] 16760 6461 EETLDEGPP True H1975_Epitope_Rep3 985.4240208352498 985.42292993586 29.824 2 -0.5299054494038155 0.15358022275492067 0.9644995535931293 ['ENSG00000100442|ENST00000396062|FKBP3'] 130270 6519 VSGLAVHS True PC9_epitope_Rep5 768.4130026590801 768.41190993586 30.048 2 -0.5299473457792125 0.15361033200704455 0.9645175171918509 ['ENST00000460259.1_1_21:44299781-44299832:+|nuORF'] 108743 10353 SYSCNSPP True PC9_epitope_Rep3 853.32761835261 853.32652993586 44.766 2 -0.5300118923252475 0.1536141140406659 0.9645451970219564 ['ENST00000453535.1_1_19:42734412-42734915:-|nuORF'] 30554 9939 GAGVSQSLRHK True H1975_Epitope_Rep1 1138.6207040095398 1138.6196099358601 43.166 2 -0.5300201657234772 0.1536141140406659 0.9645487453589062 ['nc|ENSG00000211707|A0A0A6YYK4|TRBV7-1'] 102890 14088 SPALNQGSIL True PC9_epitope_Rep4 998.53965972418 998.53856993586 62.098 2 -0.5300289855299704 0.1536141140406659 0.9645525281457908 ['PTPRC|p.*1307Ifs*34|1|0.07|ENSG00000081237|chr1:198756178-198756179|-/ATTT|frameshift_variant'] 121725 19537 VFLKPWIF True PC9_epitope_Rep6 1048.6109741896398 1048.6098699358602 87.813 2 -0.5300378093534799 0.1536141140406659 0.9645563127626421 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 123538 11622 VGPPLAETVF True NCI_RA007_Epitope_Rep3 1028.55424715916 1028.5531499358601 52.836 2 -0.5300429394361322 0.1536141140406659 0.9645585131502709 ['ENSG00000153201|ENST00000283195|RANBP2'] 82978 13249 PSFGVTSIPN True H1975_Epitope_Rep3 1017.5131106231701 1017.51257496793 56.218 1 -0.5301016615940028 0.15365050379887174 0.964583702761658 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000521361.5_1_6:112040873-112041254:-|nuORF'] 138518 6854 YHSVSLSP True PC9_epitope_Rep6 888.43413202648 888.43302993586 35.24 2 -0.5301084086885597 0.15365050379887174 0.9645865973188521 ['XDH|p.D186Y|1|0.11|ENSG00000158125|chr2:31388235-31388235|C/A|missense_variant'] 126411 7661 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 34.838 3 -0.5301187850150663 0.15365050379887174 0.9645910489687405 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 101514 10889 SLLEISTVE True PC9_epitope_Rep4 989.52809198097 989.52698993586 49.651 2 -0.5301264211203531 0.15365050379887174 0.9645943251049431 ['ENSG00000111241|ENST00000228837|FGF6'] 71622 9288 MDPFNHRIF True NCI_RA007_Epitope_Rep4 1175.5545985956699 1175.5535099358601 42.583 2 -0.5301519215101061 0.15365050379887174 0.9646052661852043 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 104440 8974 SQLKKFYNQ True PC9_epitope_Rep6 1154.6084079903399 1154.60730993586 44.534 2 -0.5302004405662034 0.1536617973131603 0.9646260860560927 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.L617Afs*13|1|0.14|ENSG00000151655|chr10:7734980-7735002|TCTCTAGACCACCACATTGTGAC/-|frameshift_variant'] 132440 8849 VVAVLLNNK True NCI_RA007_Epitope_Rep1 968.6018660579201 968.60076993586 38.421 2 -0.5302082489897586 0.1536617973131603 0.964629437013994 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 114006 6911 TPAPPGPAT True PC9_epitope_Rep5 807.41266830591 807.41156993586 31.553 2 -0.5302809292186351 0.15367559548070495 0.9646606315988574 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 128796 20632 VPYVIASGVVP True PC9_epitope_Rep3 1099.62774645259 1099.62664993586 84.632 2 -0.5303053383005485 0.1536818767219315 0.9646711097287076 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 126781 10232 VLPKRQSNHRQ True NCI_RA007_Epitope_Rep1 1361.76401419829 1361.76290993586 43.811 2 -0.5303307379285878 0.1536818767219315 0.9646820139702342 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 89848 8939 RARQYRSDP True NCI_RA007_Epitope_Rep3 1147.5846528539898 1147.58299490379 42.246 3 -0.5303632688451829 0.1536818767219315 0.9646959810670807 ['ENST00000598723.5_1_19:53210029-53217273:-|nuORF', 'ENST00000598639.5_1_19:53210029-53211464:-|nuORF', 'ENST00000597924.5_1_19:53345283-53349845:-|nuORF', 'ENST00000338230.3_2_19:53270898-53289983:-|nuORF', 'nc|ENSG00000196417|Q7L2R6-3|ZNF765'] 37446 7639 GVTLKFQIKP True NCI_RA007_Epitope_Rep4 1129.68593003505 1129.68427490379 36.037 3 -0.5303930645270354 0.1536818767219315 0.9647087751225186 ['nc|ENSG00000220201|P0C6A0-1|ZGLP1', 'ENSG00000220201|ENST00000707000|ZGLP1'] 128524 6642 VPSSSSFQ True PC9_epitope_Rep6 837.3868474808901 837.38574993586 34.277 2 -0.5304750138117535 0.15372577148166866 0.9647439701484463 ['ENST00000256951.9_1_12:13371727-13371823:+|nuORF'] 67358 7962 LSSHLTEGP True NCI_RA007_Epitope_Rep4 939.4661604307499 939.46506993586 37.377 2 -0.5305165123648498 0.15372577148166866 0.9647617963708675 ['ENSG00000168101|ENST00000304301|NUDT16L1', 'nc|ENSG00000168101|Q9BRJ7-2|NUDT16L1'] 80739 8802 PHFLSILQHL True H1975_Epitope_Rep2 1203.67642798051 1203.67477490379 38.823 3 -0.5305819714200225 0.15377217005738134 0.9647899202253453 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 62533 9198 LLKEFSRD True NCI_RA007_Epitope_Rep5 1006.5447451046199 1006.54364993586 42.031 2 -0.5306112708999873 0.1537972516993496 0.9648025104980159 ['ARHGAP36|p.F298S|1|0.2|ENSG00000147256|chrX:131085002-131085002|T/C|missense_variant'] 30437 10462 GAFADRPTSP True PC9_epitope_Rep2 1017.4879585044899 1017.48686993586 45.56 2 -0.5306292118276424 0.1537972516993496 0.9648102205129397 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'nc|ENSG00000118407|Q7Z7B0-3|FILIP1'] 85322 8425 QESASNLGLK True NCI_RA007_Epitope_Rep5 1045.5403880001697 1045.53928993586 39.086 2 -0.5306390755998082 0.1537972516993496 0.9648144596168144 ['DCDC1|p.V715Wfs*20|1|0.2|ENSG00000170959|chr11:30894319-30894319|C/-|frameshift_variant', 'DCDC1|p.M747Ifs*23|1|0.21|ENSG00000170959|chr11:30892971-30892972|-/A|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.K188Sfs*8|1|0.14|ENSG00000170959|chr11:30920827-30920827|T/-|frameshift_variant', 'ENST00000342355.8_1_11:30965860-31263019:-|nuORF'] 130570 22408 VSRRAAQL True PC9_epitope_Rep4 899.5300980999898 899.5295449679301 94.424 1 -0.5307101061389323 0.15384364608463194 0.9648449903046233 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 46848 11444 ITKAMSSMAAW True NCI_RA007_Epitope_Rep1 1195.5729510817498 1195.5718499358602 48.479 2 -0.5307931751625424 0.1539063391416323 0.9648807049570444 ['ENST00000402538.7_1_2:33747095-33749048:+|nuORF'] 120274 14411 VEDEGNYTCL True PC9_epitope_Rep5 1141.45975472097 1141.4586499358602 60.431 2 -0.5308089056495265 0.15391762155466088 0.9648874692782001 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 114749 21091 TQKQALDSLP True PC9_epitope_Rep1 1099.5873381925899 1099.58624993586 85.956 2 -0.5308173170766894 0.15391762155466088 0.9648910864577834 ['ENST00000456291.1_3_9:123638279-123638699:-|nuORF'] 46993 7921 ITQIEHEVSSS True PC9_epitope_Rep5 1228.5935457718401 1228.59244993586 35.408 2 -0.5309069846216053 0.15393141217890208 0.9649296529766532 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 33771 18124 GLKTHLDQL True PC9_epitope_Rep5 1023.57129420563 1023.57018993586 74.724 2 -0.5309388072966178 0.15394269322293574 0.964943343022394 ['nc|ENSG00000164488|Q5SW24-4|DACT2', 'ENSG00000164488|ENST00000366795|DACT2'] 21076 5416 EQWERSRTVWS True NCI_RA007_Epitope_Rep2 1462.69532550178 1462.69366490379 25.687 3 -0.5309421931394877 0.15394269322293574 0.9649447996955027 ['ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 81958 14196 PLTHAQDL True PC9_epitope_Rep1 893.46068112749 893.45958993586 59.427 2 -0.5309669887477542 0.1539439374185137 0.9649554679114423 ['ENSG00000130702|ENST00000252999|LAMA5'] 48769 10960 KDLDEALP True NCI_RA007_Epitope_Rep4 899.4600124211499 899.4594649679301 49.026 1 -0.5309715111149185 0.1539439374185137 0.964957413744066 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'DNAH1|p.Q2910H|1|0.2|ENSG00000114841|chr3:52386264-52386264|G/T|missense_variant', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 118470 21010 TYPNTYIF True PC9_epitope_Rep1 1017.48074786573 1017.4801749679301 85.643 1 -0.5309833157552535 0.1539439374185137 0.9649624930578349 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 80250 7923 PGASQLASGP True PC9_epitope_Rep1 883.4399456829099 883.4393949679301 35.3 1 -0.5310452121102532 0.1539439374185137 0.964989129393932 ['ENST00000272983.12_1_2:242089191-242089476:+|nuORF'] 101165 18119 SLGSQKLLL True PC9_epitope_Rep5 957.5858816406098 957.58478993586 74.705 2 -0.531050201217933 0.1539439374185137 0.9649912766521657 ['ENST00000465271.5_1_1:224564849-224564981:+|nuORF'] 119437 5696 VAQSEAEK True NCI_RA007_Epitope_Rep2 860.4239612655998 860.42286993586 26.771 2 -0.5310538043447175 0.1539439374185137 0.9649928274230497 ['ENSG00000065548|ENST00000337859|ZC3H15', 'ENST00000481101.5_1_2:187351750-187368784:+|nuORF', 'ENST00000468120.5_1_2:187351750-187368784:+|nuORF'] 117770 10511 TVVPPTLNP True PC9_epitope_Rep2 936.52803241132 936.52692993586 45.753 2 -0.5311705035816614 0.15399031958410064 0.9650430651826819 ['ENST00000419087.1_1_1:247782982-247783861:+|nuORF', 'ENSG00000198452|ENST00000641545|OR14L1P'] 65503 12157 LRMFFDCLY True H1975_Epitope_Rep1 1206.55657274162 1206.5554699358602 51.78 2 -0.5311948819562048 0.1539940683766255 0.9650535624910043 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 23623 13447 EWQTWRLLRRP True H1975_Epitope_Rep1 1539.8422645189899 1539.84116993586 56.839 2 -0.531197427472427 0.1539940683766255 0.9650546586419404 ['ENST00000543005.5_1_12:124118406-124132575:+|nuORF', 'ENST00000537368.5_1_12:124123856-124132575:+|nuORF', 'ENST00000538845.5_1_12:124123856-124132575:+|nuORF'] 67875 19721 LTARTERSP True PC9_epitope_Rep3 1029.55670677065 1029.55560993586 81.085 2 -0.5312049789139257 0.1539940683766255 0.9650579105057062 ['ENST00000332725.7_1_11:409920-417382:-|nuORF'] 126406 5005 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 25.956 3 -0.5312396011780233 0.1539940683766255 0.9650728209770634 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 26449 17463 FIDDANYSV True PC9_epitope_Rep4 1042.4607406971402 1042.46017496793 75.169 1 -0.5312475933908289 0.1539940683766255 0.9650762631824618 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 40018 18465 HPRVHRLFL True PC9_epitope_Rep6 1173.6883300768898 1173.6866849037901 83.666 3 -0.5313503722632743 0.1540329151051002 0.9651205385300992 ['ENST00000369838.5_1_6:80341105-80383359:+|nuORF'] 82029 14911 PLVSTLAQP True PC9_epitope_Rep5 924.5280324113198 924.52692993586 62.359 2 -0.5313577162718915 0.1540329151051002 0.9651237028437766 ['ENST00000373109.6_1_10:73822018-73822120:-|nuORF'] 141385 13127 YTEEDLREKFK True NCI_RA007_Epitope_Rep1 1456.7198089141195 1456.71817490379 55.055 3 -0.5313614148010148 0.1540329151051002 0.965125296461951 ['nc|ENSG00000155636|Q8IUH3-2|RBM45', 'ENST00000424000.6_1_2:178977216-178988379:+|nuORF', 'ENSG00000155636|ENST00000286070|RBM45', 'nc|ENSG00000155636|Q8IUH3|RBM45'] 24822 13709 FAVFHPHFVL True PC9_epitope_Rep2 1212.64439957624 1212.64276490379 58.021 3 -0.5313618379180567 0.1540329151051002 0.9651254787755502 ['ENSG00000147262|ENST00000682440|GPR119'] 99765 11889 SIIQHDQPV True PC9_epitope_Rep3 1035.5349086969097 1035.53380993586 50.751 2 -0.5314129790463715 0.1540792882631862 0.9651475166860798 ['ENSG00000135226|ENST00000335568|UGT2B28'] 100958 11833 SLFLKCRHLP True NCI_RA007_Epitope_Rep4 1212.68013346196 1212.6790299358602 52.496 2 -0.5314355441911607 0.1540880503144654 0.965157241869288 ['ENST00000271636.11_2_1:151509992-151510136:+|nuORF'] 39769 20849 HLWHPRRHYLL True PC9_epitope_Rep3 1526.8371195688999 1526.83602993586 85.469 2 -0.5314359783316158 0.1540880503144654 0.9651574289842667 ['ENST00000448759.1_1_1:43352960-43353698:-|nuORF'] 137972 9361 YFLKLKEVP True NCI_RA007_Epitope_Rep3 1135.66413196131 1135.66302993586 43.913 2 -0.5314362784010228 0.1540880503144654 0.9651575583146643 ['ENST00000260600.9_2_2:25042719-25042800:-|nuORF'] 71339 11813 LYQNLNEP True H1975_Epitope_Rep3 989.4818104948899 989.48070993586 50.586 2 -0.5315198907206277 0.15413441955193483 0.965193601020278 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000487692.1_1_7:91726485-91729288:+|nuORF'] 5478 15386 ALWDWLCAIL True PC9_epitope_Rep4 1202.6158018699 1202.6147099358602 67.114 2 -0.5315576633607462 0.15414568975349072 0.965209887361699 ['ENST00000466896.5_1_7:123190633-123197498:-|nuORF', 'ENST00000491033.1_1_7:123191608-123197498:-|nuORF'] 39079 10226 HHTEMEFYFFY True H1975_Epitope_Rep2 1549.6336367620097 1549.63252993586 44.339 2 -0.5315592077323774 0.15414568975349072 0.9652105532942339 ['FRAS1|p.S3503Y|1|0.29|ENSG00000138759|chr4:78519449-78519449|C/A|missense_variant'] 71961 4826 MESRPPPPP True H1975_Epitope_Rep1 1006.4906013567798 1006.48950993586 23.638 2 -0.5316005951590378 0.15415947082016357 0.9652284009887281 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 86590 6278 QLEEAEEEAQR True PC9_epitope_Rep5 1330.60008770426 1330.59844490379 29.125 3 -0.5316655631272114 0.15420081132598035 0.9652564230899091 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 69516 10339 LVCFLLLP True PC9_epitope_Rep3 916.5455970517598 916.54448993586 44.713 2 -0.5316775978964013 0.15420081132598035 0.9652616147102857 ['ENSG00000131183|ENST00000324417|SLC34A1'] 19484 5120 ELPAFQEWP True NCI_RA007_Epitope_Rep2 1115.52876068731 1115.52766993586 24.54 2 -0.531686732917722 0.15420081132598035 0.9652655555820595 ['ENST00000394708.6_1_4:107237221-107237419:-|nuORF'] 8947 6167 AVFVSEGK True PC9_epitope_Rep3 835.4439684341899 835.44286993586 28.765 2 -0.5317575848478301 0.15421207826271116 0.9652961259759014 ['ENSG00000102879|ENST00000219150|CORO1A', 'ENST00000567034.5_1_16:30198370-30199113:+|nuORF'] 126736 24471 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 105.89 3 -0.5317965552413936 0.15421207826271116 0.9653129440377599 ['ENSG00000150990|ENST00000308736|DHX37'] 94554 16871 RRRWARVRFR True NCI_RA007_Epitope_Rep3 1457.8704853858496 1457.86882490379 74.235 3 -0.5318350068918063 0.15422585690082105 0.9653295407158553 ['ENSG00000249715|ENST00000624922|FER1L5'] 83258 11306 PTAAAAPMSTV True PC9_epitope_Rep2 1015.5008316873101 1015.49972993586 48.811 2 -0.5318786945257986 0.15425341283028704 0.9653484003808211 ['ENST00000261318.4_1_12:117155661-117158219:-|nuORF'] 129842 24625 VRRRFKGQI True PC9_epitope_Rep4 1158.7097937974597 1158.70868993586 103.21 2 -0.5319332827894757 0.15425341283028704 0.965371970292873 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000452606.2_1_3:12880846-12881736:-|nuORF'] 1537 5346 AEEPQPSASP True H1975_Epitope_Rep2 1011.4509042894299 1011.44980993586 25.61 2 -0.5319786805593957 0.15429977030967468 0.9653915758085367 ['ENSG00000135631|ENST00000486777|RAB11FIP5'] 4743 16398 ALDGSLSLFSL True PC9_epitope_Rep3 1121.59684024713 1121.59574993586 68.212 2 -0.5320792997077121 0.15434612627875155 0.9654350417821722 ['ENST00000381440.4_1_16:19128639-19128831:+|nuORF'] 88509 17187 QSVLYAQLS True PC9_epitope_Rep2 1007.5287606873098 1007.52766993586 71.368 2 -0.5320970225908733 0.15435738719661182 0.9654426995993982 ['PPARGC1A|p.E353V|1|0.13|ENSG00000109819|chr4:23814425-23814425|T/A|missense_variant'] 99949 8390 SINRNDCDK True NCI_RA007_Epitope_Rep2 1063.4716568173499 1063.4705499358602 37.275 2 -0.5320996538067613 0.15435738719661182 0.9654438365580972 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 23605 17190 EWFWWYWQKEK True PC9_epitope_Rep5 1714.7932486378998 1714.79161490379 71.141 3 -0.5321274899367422 0.15438745092928932 0.9654558653890686 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 90373 5629 REHGIRLLEA True NCI_RA007_Epitope_Rep3 1192.66765420196 1192.66600490379 29.133 3 -0.5321590344386218 0.15440122491529842 0.9654694983351031 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 40812 10117 HSDFQTLIS True PC9_epitope_Rep5 1046.50327421546 1046.5021699358601 43.899 2 -0.5322070767886085 0.1544099682384559 0.9654902646534034 ['ENSG00000242550|ENST00000238508|SERPINB10'] 12950 5972 DLLEEEARQG True NCI_RA007_Epitope_Rep2 1158.5516809598598 1158.5505899358602 27.839 2 -0.5322103939302818 0.1544099682384559 0.9654916986366211 ['ENST00000535399.1_1_12:132195753-132198841:+|nuORF'] 101650 15626 SLLSQQPFL True PC9_epitope_Rep3 1031.56514619603 1031.56404993586 65.253 2 -0.5322106122749936 0.1544099682384559 0.9654917930265836 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L'] 115960 11395 TSHYLTSN True H1975_Epitope_Rep1 921.41921023833 921.41810993586 48.81 2 -0.5322695576891568 0.15443751323354563 0.9655172780438833 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|32|1|sense'] 55552 6330 LAGRKRFVAP True NCI_RA007_Epitope_Rep5 1113.6770966868498 1113.6759899358601 31.025 2 -0.532284796034939 0.15443751323354563 0.9655238673213651 ['nc|ENSG00000164694|Q4ZHG4-2|FNDC1', 'ENSG00000164694|ENST00000297267|FNDC1'] 76975 9438 NRFILLKP True NCI_RA007_Epitope_Rep4 999.6229358556699 999.62182993586 43.163 2 -0.5323061084891016 0.1544512850581452 0.965533083812 ['ENSG00000125170|ENST00000340099|DOK4'] 125971 14284 VLDLIFYQRMK True NCI_RA007_Epitope_Rep2 1424.78499245332 1424.78388993586 60.224 2 -0.5323469854149492 0.1544625407166124 0.9655507631168635 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 108910 4202 TAASSLEEPE True NCI_RA007_Epitope_Rep5 1032.46113461996 1032.4600299358601 22.695 2 -0.5323470397984638 0.1544625407166124 0.9655507866397377 ['NTN1|p.V466L|1|0.29|ENSG00000065320|chr17:9182954-9182954|G/T|missense_variant'] 72530 20703 MLKFVAVSA True PC9_epitope_Rep6 964.5415743004799 964.54046993586 92.396 2 -0.5324346348667901 0.15449259784042604 0.9655886815170323 ['ENST00000578904.1_1_17:80208040-80213403:-|nuORF'] 89740 6954 RADQEKERKK True H1975_Epitope_Rep1 1286.7054962626596 1286.70385490379 31.789 3 -0.5324591235392218 0.15450385160334185 0.9655992780996354 ['ENSG00000113194|ENST00000261942|FAF2'] 54244 5161 KWLDSDAR True NCI_RA007_Epitope_Rep5 989.4930438849299 989.49194993586 26.547 2 -0.5324671461555553 0.15450385160334185 0.9656027498272546 ['ENSG00000120915|ENST00000521400|EPHX2', 'nc|ENSG00000120915|P34913-3|EPHX2', 'nc|ENSG00000120915|P34913-2|EPHX2'] 67759 19217 LSYMEKLWL True PC9_epitope_Rep5 1181.6154675167297 1181.6143699358602 78.959 2 -0.5324834426933742 0.15451258834641565 0.9656098023861381 ['nc|ENSG00000169064|A8MT70-3|ZBBX', 'ZBBX|p.T746Pfs*4|1|0.09|ENSG00000169064|chr3:167242546-167242546|C/-|frameshift_variant', 'nc|ENSG00000169064|A8MT70|ZBBX', 'ENSG00000169064|ENST00000675490|ZBBX'] 34778 11415 GQGEEVEKLVK True PC9_epitope_Rep2 1214.65066672514 1214.6495699358602 49.23 2 -0.5324978826286848 0.15451258834641565 0.9656160518698743 ['ENSG00000131242|ENST00000621161|RAB11FIP4'] 64993 5727 LQHHQIIQQ True NCI_RA007_Epitope_Rep5 1143.61489035311 1143.61378993586 28.717 2 -0.5324983806522564 0.15451258834641565 0.965616267416973 ['ENSG00000136937|ENST00000375147|NCBP1'] 102344 7389 SLSTFCSLKP True H1975_Epitope_Rep3 1081.5477818797299 1081.54668993586 33.4 2 -0.5325474493687788 0.15455892650675004 0.9656375067802228 ['ENST00000524964.1_1_11:126164366-126174190:-|nuORF'] 29291 18229 FVCAQCFRP True PC9_epitope_Rep6 1069.4837421545299 1069.48264993586 82.76 2 -0.532627900619059 0.15458394398306466 0.9656723394171234 ['ENST00000476932.5_1_2:128412197-128421974:-|nuORF', 'ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'nc|ENSG00000072163|Q7Z4I7-3|LIMS2', 'ENSG00000072163|ENST00000355119|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-5|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-2|LIMS2'] 126904 15532 VLQQSVLSV True PC9_epitope_Rep3 971.5651461960299 971.56404993586 64.893 2 -0.5326358165263112 0.15458394398306466 0.9656757673652131 ['ENST00000522380.2_1_5:170346486-170397534:+|nuORF'] 85302 7924 QERFTQDTQP True H1975_Epitope_Rep1 1248.5734790335998 1248.5723899358602 35.43 2 -0.532640729248033 0.15458394398306466 0.9656778948543349 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 22747 9312 ETTVDEDVLP True H1975_Epitope_Rep2 1116.51864949608 1116.5175499358602 40.779 2 -0.5327117155783816 0.1546114765843809 0.9657086408790748 ['ENSG00000055211|ENST00000367419|GINM1'] 671 5748 AATRRSPWTGP True NCI_RA007_Epitope_Rep4 1198.6207040095398 1198.6190549037901 28.729 3 -0.5327361619777816 0.1546114765843809 0.9657192313735882 ['ENST00000261226.8_1_12:94976313-95044322:-|nuORF'] 46729 18286 ITEGQLDWA True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 75.659 2 -0.5328241193934977 0.15462524221256085 0.9657573447067321 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF', 'RETSAT|p.P148L|1|0.43|ENSG00000042445|chr2:85350934-85350934|G/A|missense_variant'] 46166 8247 ISLNEDLRS True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 36.699 2 -0.532859554441449 0.15463900739245123 0.9657727032913304 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F'] 89356 14541 QWSFTPTQA True NCI_RA007_Epitope_Rep4 1064.49270953176 1064.4916099358602 63.304 2 -0.5329326743834236 0.1546502540054709 0.965804402951648 ['ENST00000449359.7_1_16:68391035-68391134:+|nuORF'] 81756 14953 PLPHPSLLS True PC9_epitope_Rep6 959.54401682863 959.54290993586 69.525 2 -0.5329537304789764 0.1546502540054709 0.9658135332340827 ['ENSG00000205978|ENST00000382554|NYNRIN'] 43002 6819 IETAVTSTP True NCI_RA007_Epitope_Rep1 917.4705771048501 917.46948993586 30.531 2 -0.5329831747628664 0.15468030024260385 0.9658263021641083 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'ENST00000465486.6_1_9:134065776-134072618:+|nuORF', 'ENST00000525980.5_1_9:134025776-134070755:+|nuORF'] 116650 6412 TVASLQHYFP True NCI_RA007_Epitope_Rep1 1161.5818588893299 1161.58021490379 28.966 3 -0.5330253973312687 0.15471034550131882 0.9658446154061725 ['ENST00000415611.7_1_7:22898472-22898607:+|nuORF'] 920 8798 ADLVPRRGYQE True NCI_RA007_Epitope_Rep1 1302.6680481247802 1302.6669499358602 38.225 2 -0.5331069314647376 0.1547566713883326 0.9658799887720708 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'nc|ENSG00000066827|Q9P243-3|ZFAT'] 47491 11823 IVQCQLLMLRV True PC9_epitope_Rep3 1314.75158415006 1314.75048993586 50.494 2 -0.5331686153289076 0.15476791325442438 0.9659067584925962 ['ENST00000428076.1_1_13:19956755-19957193:+|nuORF', 'ENST00000435741.1_1_Y:28772724-28773147:-|nuORF'] 31400 7832 GDVVLKDVS True NCI_RA007_Epitope_Rep2 930.5022115863 930.50110993586 35.093 2 -0.5331720622396777 0.15476791325442438 0.9659082546045994 ['ENST00000422086.5_2_22:21362941-21363382:-|nuORF', 'ENST00000442739.1_1_22:21357241-21363382:-|nuORF'] 77255 3862 NRYIYFRLFSH True NCI_RA007_Epitope_Rep3 1514.7782672801 1514.7766349037902 21.44 3 -0.5332715435580233 0.15478167431864803 0.9659514436615794 ['ENST00000476849.5_1_2:99733658-99743552:-|nuORF'] 22719 3731 ETSEQEQKHK True NCI_RA007_Epitope_Rep2 1242.5840437173 1242.5824049037901 19.155 3 -0.5333457146079126 0.15480667480667482 0.9659836567951159 ['ENSG00000137492|ENST00000260045|THAP12', 'nc|ENSG00000137492|O43422-2|THAP12', 'ENST00000520248.1_1_8:79672597-79674655:-|nuORF', 'ENST00000489193.1_1_3:86062314-86062485:+|nuORF'] 99895 11007 SILVMM[Oxidation]LSL True PC9_epitope_Rep6 1021.55517613973 1021.55406993586 53.232 2 -0.5333615982838259 0.15480667480667482 0.965990556591712 ['ENST00000481463.5_1_3:195101781-195102681:-|nuORF'] 21964 10159 ESEGRTIEL True PC9_epitope_Rep4 1032.50875351872 1032.5076499358602 46.752 2 -0.5334253167858919 0.15480667480667482 0.9660182405263487 ['nc|ENSG00000147394|O15231-4|ZNF185', 'nc|ENSG00000147394|O15231-7|ZNF185', 'nc|ENSG00000147394|O15231|ZNF185', 'nc|ENSG00000147394|O15231-3|ZNF185', 'nc|ENSG00000147394|O15231-8|ZNF185', 'nc|ENSG00000147394|O15231-6|ZNF185', 'ENSG00000147394|ENST00000695776|ZNF185'] 42884 9607 IERAIGLK True PC9_epitope_Rep2 898.5600012459399 898.55890993586 42.296 2 -0.5334754844211779 0.15483167285277072 0.9660400425307267 ['ENSG00000107223|ENST00000224073|EDF1'] 63644 9351 LMPTELAAL True PC9_epitope_Rep4 957.5205045027299 957.51940993586 43.576 2 -0.533477755966392 0.15483167285277072 0.9660410298218555 ['ENST00000477908.1_1_1:109358795-109359618:-|nuORF'] 102434 19285 SLTQPALQVP True PC9_epitope_Rep2 1052.5866099165999 1052.58550993586 79.554 2 -0.5334980810412394 0.15483167285277072 0.9660498642419658 ['ENST00000306353.7_2_2:85825849-85826182:-|nuORF'] 120617 21785 VEHVVHDSVV True PC9_epitope_Rep3 1118.5720224816198 1118.57092993586 89.095 2 -0.5335137619204852 0.15484543131094433 0.9660566805854701 ['nc|ENSG00000005889|P17010-3|ZFX', 'ENSG00000005889|ENST00000304543|ZFX'] 3769 17619 AGSWMWLSFS True H1975_Epitope_Rep2 1170.51681610462 1170.51570993586 73.088 2 -0.5335679614720423 0.15487546801237181 0.966080244376626 ['CRY1|p.C402F|1|0.27|ENSG00000008405|chr12:106997999-106997999|C/A|missense_variant'] 4742 16301 ALDGSLSLFSL True PC9_epitope_Rep1 1121.59684024713 1121.59574993586 67.521 2 -0.5335828360617377 0.15488922530969707 0.9660867122609555 ['ENST00000381440.4_1_16:19128639-19128831:+|nuORF'] 70554 12259 LVYYPPPSAP True PC9_epitope_Rep2 1102.5698972233 1102.5688099358601 52.465 2 -0.5337103164635992 0.1549492943531978 0.9661421622042886 ['nc|ENSG00000176834|Q8N0Z9-2|VSIG10', 'ENSG00000176834|ENST00000359236|VSIG10'] 20091 7486 EMIHRFWYNYR True H1975_Epitope_Rep1 1613.7561519365297 1613.75449490379 33.791 3 -0.5337337011761846 0.1549492943531978 0.966152337316278 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 127513 8093 VNLYMNDHRPK True NCI_RA007_Epitope_Rep1 1385.68740367037 1385.6863099358602 35.478 2 -0.5337474734194609 0.15496052738666885 0.9661583303790378 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 47178 7987 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep2 1208.4954293164699 1208.4943299358602 35.671 2 -0.5337768059788948 0.15496052738666885 0.966171095856809 ['ENSG00000145879|ENST00000274565|SPINK7'] 58746 10514 LESDEHTCP True H1975_Epitope_Rep1 1029.40732522529 1029.4062299358602 45.394 2 -0.5338020958404743 0.15497428217982942 0.9661821033423117 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6', 'RBBP6|p.R784*|1|0.37|ENSG00000122257|chr16:24569040-24569041|CG/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-4|RBBP6'] 66788 7382 LSLSEGGLVP True H1975_Epitope_Rep3 970.5335117145798 970.53240993586 33.374 2 -0.5338904020991203 0.15498551385136236 0.9662205489777947 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7'] 55894 7187 LAQKLFNN True PC9_epitope_Rep4 946.52361573722 946.52250993586 34.947 2 -0.5338922834897663 0.15498551385136236 0.9662213682443567 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000591556.1_1_17:40458135-40460407:+|nuORF', 'ENST00000468496.5_1_17:40362419-40369297:-|nuORF'] 33560 7772 GLERDPQL True PC9_epitope_Rep5 926.4821448480598 926.48104993586 34.838 2 -0.5339458597037089 0.15499926756620389 0.9662447014414556 ['nc|ENSG00000174527|Q8N1T3-3|MYO1H', 'nc|ENSG00000174527|Q8N1T3|MYO1H', 'ENSG00000174527|ENST00000310903|MYO1H', 'MYO1H|p.A347Qfs*20|1|0.28|ENSG00000174527|chr12:109407844-109407844|G/-|frameshift_variant'] 108941 4354 TADTTTHVTP True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 21.863 2 -0.5339814345713654 0.15501049787601112 0.9662601980165674 ['nc|ENSG00000182871|P39060|COL18A1', 'nc|ENSG00000182871|P39060-1|COL18A1'] 86428 5780 QKKKKKKKK True NCI_RA007_Epitope_Rep4 1170.8288463009796 1170.82720490379 28.855 3 -0.5339831696894032 0.15501049787601112 0.96626095390778 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 11519 14089 DFLIRHHGPK True NCI_RA007_Epitope_Rep2 1218.6621748987002 1218.66106993586 59.464 2 -0.5340522953021284 0.15502172745471413 0.9662910729622656 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 126394 3552 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 19.678 3 -0.5340745641642469 0.15502172745471413 0.9663007779175488 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 109772 6696 TEDVKMSVP True H1975_Epitope_Rep2 1004.4848472699999 1004.48374993586 30.666 2 -0.5341018964251613 0.15503295630238426 0.9663126909353955 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4'] 10201 10098 CAKYMISHLY True H1975_Epitope_Rep3 1227.57803646219 1227.57640490379 43.883 3 -0.5341275451324862 0.15503295630238426 0.9663238715582924 ['KBTBD8|p.D148Y|1|0.12|ENSG00000163376|chr3:67003409-67003409|G/T|missense_variant'] 87146 7276 QPETEPLER True NCI_RA007_Epitope_Rep5 1097.5353026197297 1097.5342099358602 34.664 2 -0.5341734649795807 0.15505654543975267 0.9663438920373811 ['ENST00000361483.4_1_12:111798605-111799217:-|nuORF'] 57600 10492 LEEAIRRS True H1975_Epitope_Rep3 972.53524305008 972.53414993586 45.42 2 -0.5341810190927903 0.15505654543975267 0.9663471859536861 ['nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 71627 13047 MDPFNHRIF True PC9_epitope_Rep4 1175.5545985956699 1175.5535099358601 58.078 2 -0.5341899478139753 0.15505654543975267 0.9663510794101681 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 77450 11663 NSTFSEIFKK True PC9_epitope_Rep4 1199.6186383208699 1199.61700490379 52.623 3 -0.5342193969686897 0.15505654543975267 0.9663639221743413 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 117169 16251 TVLEQLGV True PC9_epitope_Rep3 857.4858332461698 857.48472993586 67.648 2 -0.534259289793011 0.15505654543975267 0.9663813222914408 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000528694.1_1_11:829331-829541:+|nuORF', 'ENST00000530737.2_1_11:828674-829541:+|nuORF', 'nc|ENSG00000177685|Q8N4Y2-2|CRACR2B', 'ENST00000530688.5_1_11:829331-830866:+|nuORF', 'ENST00000527763.5_1_11:829331-831706:+|nuORF'] 138635 17180 YIFIMEML True H1975_Epitope_Rep3 1058.51806197458 1058.51747496793 71.72 1 -0.5342659339315848 0.15505654543975267 0.9663842205977902 ['ENSG00000007314|ENST00000435607|SCN4A'] 4605 18714 AKVAYKNVI True PC9_epitope_Rep2 1004.6018660579199 1004.60076993586 77.355 2 -0.5342673002283045 0.15505654543975267 0.9663848166151955 ['PSAP|p.S289Y|1|0.25|ENSG00000197746|chr10:71821919-71821919|G/T|missense_variant'] 11100 4856 DC[Carbamidomethyl]QEC[Carbamidomethyl]PEGYR True NCI_RA007_Epitope_Rep2 1312.4812360837398 1312.48012993586 23.512 2 -0.5343001701808501 0.15505654543975267 0.9663991565953102 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 24507 19799 FAEQLTAFQVW True PC9_epitope_Rep5 1338.66083748602 1338.6597499358602 81.203 2 -0.5343071121911988 0.15505654543975267 0.9664021854338072 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF', 'ENST00000574767.5_1_17:78681670-78831736:+|nuORF'] 69068 6145 LTQQCSTAK True H1975_Epitope_Rep3 978.4804305959 978.47932993586 28.647 2 -0.5343329611935839 0.15505654543975267 0.9664134643869563 ['ENST00000453612.1_1_7:43810757-43831091:+|nuORF'] 90344 13184 REFLRRFSIW True NCI_RA007_Epitope_Rep2 1408.7727879768397 1408.7716899358602 55.916 2 -0.5344400216970124 0.1550865659984379 0.9664601941072235 ['nc|ENSG00000117322|P20023-2|CR2'] 61110 25252 LIIIKDLLLLI True H1975_Epitope_Rep1 1278.8890465156999 1278.8874149037902 104.59 3 -0.5345556910566164 0.15512780878309115 0.9665107086511139 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 3155 12367 AGDLSAGF True PC9_epitope_Rep1 736.3391690124799 736.3386249679301 52.428 1 -0.5345642684605216 0.15512780878309115 0.9665144556655069 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 136101 12094 WRLLLYRERRL True NCI_RA007_Epitope_Rep2 1572.9364992569997 1572.93484490379 51.636 3 -0.5345961874717893 0.15512780878309115 0.9665284007748659 ['ENSG00000180998|ENST00000321662|GPR137C'] 58047 20110 LEIHRKIKQS True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74480993586 84.296 2 -0.534689046902657 0.15513903125559297 0.9665689825859182 ['ENSG00000004534|ENST00000266022|RBM6', 'ENST00000421682.1_1_3:50103854-50112609:+|nuORF', 'ENST00000454079.5_1_3:50099373-50114563:+|nuORF', 'ENST00000434592.5_1_3:50097096-50127827:+|nuORF', 'nc|ENSG00000004534|P78332-2|RBM6', 'SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion'] 27045 320 FLFCLFKHLCL True NCI_RA007_Epitope_Rep2 1382.7243067730599 1382.7226649037902 1.7543 3 -0.5347043082373488 0.15513903125559297 0.9665756539321799 ['nc|ENSG00000137691|Q9BRQ4-2|CFAP300', 'ENST00000530659.1_1_11:101918495-101953927:+|nuORF', 'ENSG00000137691|ENST00000434758|CFAP300'] 120686 4611 VEISADGLPSP True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 22.839 2 -0.5347702017134491 0.15516652294876593 0.9666044644122854 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1'] 18322 15309 EISIRQRFI True PC9_epitope_Rep2 1160.6665915728001 1160.66494490379 64.168 3 -0.5348015038835816 0.15516652294876593 0.9666181538980976 ['ENSG00000143740|ENST00000617596|SNAP47', 'nc|ENSG00000143740|Q5SQN1-2|SNAP47', 'nc|ENSG00000143740|Q5SQN1|SNAP47', 'nc|ENSG00000143740|Q5SQN1-3|SNAP47', 'nc|ENSG00000143740|Q5SQN1-4|SNAP47'] 30719 8833 GALGSLTVVL True NCI_RA007_Epitope_Rep4 928.5593325396 928.55822993586 40.786 2 -0.5348294934590571 0.15520775713402532 0.9666303964797759 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A', 'SCN11A|p.S1201Lfs*15|1|0.18|ENSG00000168356|chr3:38871602-38871602|G/-|frameshift_variant', 'SCN11A|p.F1288Lfs*2|1|0.04|ENSG00000168356|chr3:38867408-38867408|G/-|frameshift_variant', 'nc|ENSG00000168356|Q9UI33-2|SCN11A', 'SCN11A|p.D986Mfs*67|1|0.18|ENSG00000168356|chr3:38885396-38885396|C/-|frameshift_variant', 'SCN11A|p.V709L|1|0.06|ENSG00000168356|chr3:38897123-38897123|C/G|missense_variant'] 126404 3989 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 21.723 3 -0.5348815254250435 0.15520775713402532 0.9666531596925376 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 120814 9578 VELLESPP True H1975_Epitope_Rep3 882.46984882886 882.46874993586 41.853 2 -0.5348993363351094 0.15520775713402532 0.9666609530610769 ['ENSG00000156299|ENST00000541036|TIAM1', 'nc|ENSG00000156299|Q13009-2|TIAM1'] 80600 11172 PGQLKILTG True PC9_epitope_Rep4 925.55966689277 925.55856993586 50.751 2 -0.5349196563582204 0.15522150096799908 0.9666698451698 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 98856 7814 SGTSDPYVKI True NCI_RA007_Epitope_Rep3 1065.5342399905699 1065.5331499358601 37.855 2 -0.5349296706896438 0.15523524435478622 0.9666742278072966 ['ENSG00000170743|ENST00000318881|SYT9'] 126398 4666 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 24.37 3 -0.5349669999060724 0.1552464616886286 0.9666905663789923 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 91512 8260 RHWRQWNRIFR True NCI_RA007_Epitope_Rep1 1653.8865293728097 1653.88489490379 36.128 3 -0.534983235687942 0.1552464616886286 0.9666976735525049 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 62994 7159 LLPPGNKA True PC9_epitope_Rep2 808.48068829608 808.47958993586 32.93 2 -0.5350547553688306 0.1553252753330839 0.9667289880467211 ['ENST00000263464.7_1_11:102193411-102193507:+|nuORF'] 91483 21681 RHRRRRKQRP True PC9_epitope_Rep3 1444.8824470518798 1444.88134993586 88.694 2 -0.535098811467917 0.15536649640498423 0.9667482834056572 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132813-7133230:-|nuORF', 'ENST00000574642.5_1_17:7132550-7133686:-|nuORF'] 2782 7793 AETTKETENNV True NCI_RA007_Epitope_Rep2 1234.5677249468201 1234.5666299358602 34.941 2 -0.5350990105723874 0.15536649640498423 0.9667483706177263 ['ENSG00000088205|ENST00000263239|DDX18'] 142548 15535 YYLIWKNY True PC9_epitope_Rep5 1161.5858816406098 1161.58478993586 64.765 2 -0.5351053031788088 0.15536649640498423 0.9667511269610397 ['ENSG00000214814|ENST00000522917|FER1L6'] 103471 17635 SPQEHRYHR True PC9_epitope_Rep5 1208.57990182672 1208.5788099358601 72.845 2 -0.5351236364706982 0.15537265363219363 0.9667591579748734 ['TRIM48|p.S134P|1|0.14|ENSG00000150244|chr11:55265255-55265255|T/C|missense_variant'] 103135 19609 SPHRILLGRA True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 80.462 2 -0.5351312240840118 0.15537265363219363 0.9667624819957452 ['ENST00000560415.1_2_15:40617466-40617688:+|nuORF'] 132649 12083 VVFYRSKTYFF True NCI_RA007_Epitope_Rep1 1455.7550722240296 1455.7539699358601 50.987 2 -0.5351332908479193 0.15537265363219363 0.9667633874366108 ['MMP8|p.A380V|1|0.34|ENSG00000118113|chr11:102714607-102714607|G/A|missense_variant'] 92421 18898 RLRAPAEIRV True NCI_RA007_Epitope_Rep4 1179.72002412799 1179.71836490379 81.717 3 -0.5351677983520844 0.15537265363219363 0.9667785064426314 ['PXDN|p.N750Tfs*115|1|0.06|ENSG00000130508|chr2:1649527-1649531|CAGGT/-|frameshift_variant'] 55579 11998 LAHEIGFG True PC9_epitope_Rep5 842.4286527232199 842.42754993586 51.145 2 -0.5351962599363314 0.15538133732372603 0.9667909785126144 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000446226.2_1_9:98680749-98680890:+|nuORF'] 110865 26725 TGRRRKTSKS True PC9_epitope_Rep5 1175.6847012484297 1175.6836099358602 109.02 2 -0.5352054028952751 0.15538133732372603 0.9667949854077726 ['ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2'] 139159 4073 YLDYGEENWKK True NCI_RA007_Epitope_Rep2 1443.6670450652698 1443.66538490379 20.481 3 -0.5352385327473772 0.15538133732372603 0.9668095061129491 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000508667.5_1_5:145522961-145531505:-|nuORF'] 121080 12527 VERAEEAL True PC9_epitope_Rep2 915.4661604307498 915.46506993586 53.492 2 -0.5353200952327809 0.15543881334981458 0.9668452652107273 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 3240 6594 AGEVAKEWQEL True NCI_RA007_Epitope_Rep5 1258.6193665968597 1258.61826993586 32.023 2 -0.5353378186670478 0.15543881334981458 0.9668530376086591 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF'] 125997 11421 VLDQLLLEAP True H1975_Epitope_Rep3 1109.63322575585 1109.6321299358601 49.047 2 -0.535362894238356 0.15543881334981458 0.9668640354131158 ['ENSG00000073331|ENST00000650871|ALPK1', 'ALPK1|p.D797Gfs*8|1|0.09|ENSG00000073331|chr4:112431936-112431937|-/GATGTGTGCCT|frameshift_variant', 'ENST00000509688.5_1_4:113236981-113303765:+|nuORF'] 98266 15189 SEVFHVNISL True PC9_epitope_Rep2 1143.59242357303 1143.5913299358601 63.685 2 -0.5353979066753403 0.15545254940229325 0.966879393779373 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant'] 108634 10892 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 46.879 3 -0.5355093627785336 0.15551254736773626 0.9669283031170838 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 90906 5616 REYHKWRTYFK True NCI_RA007_Epitope_Rep5 1612.8262801016797 1612.8246449037902 28.29 3 -0.5355157938174255 0.15551254736773626 0.9669311260627549 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP'] 142190 13136 YVVDDAAVL True NCI_RA007_Epitope_Rep4 963.4913125494298 963.4907649679301 57.626 1 -0.535705489022085 0.1555750715586781 0.9670144368591905 ['ENSG00000198841|ENST00000371614|KTI12'] 46130 8425 ISKEHWNP True PC9_epitope_Rep3 1009.49812926537 1009.49702993586 37.371 2 -0.5357370879776685 0.1555888045016182 0.9670283226648844 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000417282.1_1_7:56372411-56373020:-|nuORF', 'nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A'] 108818 16415 SYVKDLVVQR True PC9_epitope_Rep3 1205.6768219033297 1205.6751749037899 68.277 3 -0.5357471885086733 0.15560000650501699 0.967032761720146 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 19611 19384 ELQQLTLTGFG True H1975_Epitope_Rep3 1205.62920300457 1205.62867496793 81.246 1 -0.5357634365737473 0.15560000650501699 0.9670399030378756 ['ENST00000591340.5_1_19:37039208-37045651:-|nuORF'] 112361 11773 TLALAPSP True H1975_Epitope_Rep2 768.43815477776 768.43760496793 50.359 1 -0.5359044278498742 0.15567372426578202 0.9671018971974281 ['ENST00000373615.8_2_9:126774341-126774419:+|nuORF'] 34048 18630 GLVLSLEEQL True PC9_epitope_Rep2 1099.61249031127 1099.6119749679299 77.026 1 -0.5359162777773163 0.15567372426578202 0.9671071097635195 ['ENSG00000116830|ENST00000369466|TTF2'] 17181 8295 EGSESEEEAPA True PC9_epitope_Rep3 1133.43604207093 1133.43494993586 36.88 2 -0.5359314725762154 0.15567372426578202 0.967113794162016 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1', 'ENST00000515035.5_1_5:149748314-149754605:+|nuORF'] 119484 9606 VARPAPVAV True PC9_epitope_Rep3 878.5337864980999 878.53268993586 41.901 2 -0.5359847120845254 0.15571744503707557 0.9671372192502747 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 37820 22679 GYHDKKRMQK True NCI_RA007_Epitope_Rep2 1289.66627430297 1289.6651699358601 94.385 2 -0.5360270156460424 0.15571744503707557 0.9671558373704385 ['WFDC10A|p.R24H|1|0.23|ENSG00000180305|chr20:45629884-45629884|G/A|missense_variant'] 73785 8630 NAGAKLSSI True PC9_epitope_Rep6 859.47633119163 859.4752299358599 43.012 2 -0.5360975622699808 0.15574743483421954 0.9671868949435999 ['ENST00000398900.2_1_3:170371678-170371921:-|nuORF'] 97765 12331 SEITEEQVQPD True NCI_RA007_Epitope_Rep1 1273.5673905936499 1273.5662899358601 51.936 2 -0.5362116359830695 0.15579368434745847 0.9672371401285915 ['ENSG00000107036|ENST00000414202|RIC1', 'nc|ENSG00000107036|Q4ADV7-3|RIC1'] 71191 18084 LYNSILKQV True PC9_epitope_Rep5 1076.6229954253201 1076.62188993586 74.573 2 -0.5362649234139961 0.15580741150262606 0.9672606219538366 ['nc|ENSG00000174776|Q8IV35-3|CFAP337', 'ENSG00000174776|ENST00000682715|WDR49'] 80782 16839 PHLAPLVL True PC9_epitope_Rep6 858.53272386894 858.53162993586 77.286 2 -0.5362948177430464 0.15585112437196144 0.9672737982935616 ['ENST00000378980.7_1_9:34581122-34589618:-|nuORF'] 35735 8448 GTGKTAAF True PC9_epitope_Rep1 751.3864535580699 751.38534993586 37.332 2 -0.5363336121898169 0.15585112437196144 0.967290900707376 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'TGIF1-DDX19B|2|fusion', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'TGIF1-DDX19B|1|fusion', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'ENST00000562140.2_1_16:70398455-70404584:+|nuORF', 'ENST00000566574.5_1_16:70398455-70398617:+|nuORF', 'nc|ENSG00000109832|Q9UHL0-2|DDX25', 'ENST00000569319.5_1_16:70395351-70399888:+|nuORF', 'ENSG00000109832|ENST00000263576|DDX25', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENSG00000124228|ENST00000618172|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 56905 11424 LDQANDVINK True PC9_epitope_Rep1 1128.5775017848798 1128.57640993586 48.821 2 -0.5363714787749086 0.15587350621900659 0.9673075975964277 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000471314.1_1_9:100116971-100120019:+|nuORF'] 142547 17509 YYLHSHRIL True PC9_epitope_Rep3 1200.64037682496 1200.63926993586 72.527 2 -0.5363772762024003 0.15587350621900659 0.9673101542211777 ['ENSG00000163482|ENST00000295709|STK36', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 79707 5207 PDTGPWGEVK True NCI_RA007_Epitope_Rep2 1084.5189242795998 1084.5178299358602 24.873 2 -0.5364085762670991 0.15587350621900659 0.9673239587425264 ['CDHR1|p.A801Rfs*40|1|0.28|ENSG00000148600|chr10:84214441-84214441|G/-|frameshift_variant', 'ENSG00000148600|ENST00000623527|CDHR1', 'nc|ENSG00000148600|Q96JP9-2|CDHR1'] 19541 11686 ELPSSQNVSPA True H1975_Epitope_Rep1 1127.54586730343 1127.5447699358601 49.94 2 -0.5364141633152752 0.15587350621900659 0.9673264230947044 ['ENSG00000164309|ENST00000446378|CMYA5'] 98681 16157 SGEDAFVF True PC9_epitope_Rep3 870.37594844402 870.3753949679301 67.293 1 -0.5365240018061187 0.15591721267498007 0.9673748864811633 ['DCAF8L1|p.V310F|1|0.35|ENSG00000226372|chrX:27980407-27980407|C/A|missense_variant'] 110761 8634 TGGVSTGVI True H1975_Epitope_Rep2 789.4232329896099 789.4226849679301 38.167 1 -0.5365406589600733 0.15591721267498007 0.9673822386004955 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-4|TRPM1'] 120605 20667 VEHQGGFPIYY True H1975_Epitope_Rep2 1308.6138872935999 1308.61278993586 85.604 2 -0.536576447553213 0.15593093581322756 0.9673980372450418 ['ENSG00000169359|ENST00000643144|SLC33A1'] 85306 8209 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.5723899358602 36.529 2 -0.5365968510852839 0.15593958804116337 0.9674070456653276 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 57565 6769 LEDSLQAQ True H1975_Epitope_Rep2 902.4345259493 902.43342993586 30.952 2 -0.5366060297252484 0.15593958804116337 0.9674110984871263 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 68998 12627 LTPRALSIP True PC9_epitope_Rep1 966.5862159937799 966.58510993586 53.44 2 -0.5366067064228356 0.15593958804116337 0.9674113972906845 ['ENST00000578788.1_1_17:8870862-8871099:+|nuORF'] 126409 6100 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 30.145 3 -0.5366822818630711 0.15596703135922488 0.9674447756161544 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 20140 7528 ENDETRFILSK True NCI_RA007_Epitope_Rep2 1350.6779441021401 1350.6768499358602 33.908 2 -0.5366832697512167 0.15596703135922488 0.9674452120162822 ['ENSG00000197106|ENST00000331565|SLC6A17'] 126423 7814 VLKKKKKKKK True PC9_epitope_Rep6 1254.92274668582 1254.9211049037901 39.448 3 -0.5367311372299232 0.15599447289279036 0.9674663604052984 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 118788 15529 VAADSQEEL True PC9_epitope_Rep5 960.44000525256 960.43890993586 64.743 2 -0.5367773373227425 0.15599447289279036 0.9674867775324881 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000477870.5_1_20:39796371-39799023:+|nuORF'] 75441 4470 NIYRLVTK True NCI_RA007_Epitope_Rep3 1005.5971150306499 1005.59600993586 24.4 2 -0.5368213108580957 0.15600058518506477 0.9675062156298094 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 90892 11829 REWSRLSREVI True H1975_Epitope_Rep1 1429.7789955560897 1429.77788993586 50.495 2 -0.5368444134595182 0.15600058518506477 0.967516429861215 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-5|CAPRIN2'] 88788 11004 QTRSRWRHLEI True PC9_epitope_Rep5 1480.801127983 1480.79947490379 47.315 3 -0.5368739751538478 0.15600058518506477 0.9675295017690424 ['ENST00000313431.13_2_1:144932113-144932161:-|nuORF'] 30641 6752 GAKQILGA True NCI_RA007_Epitope_Rep3 756.4493881677998 756.44828993586 33.65 2 -0.5368962387406526 0.15600058518506477 0.9675393479699866 ['ENST00000368361.8_1_1:155240712-155243295:-|nuORF'] 127004 24666 VLRVLRPLK True H1975_Epitope_Rep3 1092.74953335112 1092.74842993586 102.62 2 -0.5369686643869046 0.15603055916775033 0.9675713872676105 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 33433 7849 GLAGARQLQLQ True NCI_RA007_Epitope_Rep3 1153.65675516509 1153.65564993586 37.995 2 -0.5370201874602601 0.15605799551379995 0.9675941878535826 ['ENSG00000187954|ENST00000530374|ZFTRAF1'] 43382 13729 IGDHQYTI True PC9_epitope_Rep6 945.4555957470501 945.45448993586 64.597 2 -0.537026512279197 0.15605799551379995 0.9675969872488772 ['STXBP5L|p.Q1114Hfs*9|1|0.17|ENSG00000145087|chr3:121418379-121418379|A/-|frameshift_variant', 'ENSG00000145087|ENST00000471454|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9|STXBP5L'] 76874 7179 NRDLATPVM-[Oxidation] True PC9_epitope_Rep5 1031.50698007735 1031.50588993586 32.58 2 -0.5370957480758062 0.15606156646675443 0.9676276379879496 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 141611 11926 YTRQERYRARP True PC9_epitope_Rep1 1494.7803925384198 1494.77875490379 50.738 3 -0.5370975211074176 0.15606156646675443 0.9676284230704871 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 63815 19541 LNIKSPFSL True PC9_epitope_Rep5 1017.58588164061 1017.58478993586 80.217 2 -0.5371633410720102 0.15606156646675443 0.9676575732361987 ['ENSG00000111713|ENST00000261195|GYS2'] 15193 10541 EACLQGNLIA True H1975_Epitope_Rep2 1030.5117307241799 1030.5106299358602 45.568 2 -0.5371759873763404 0.15606156646675443 0.967663175264535 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF'] 41088 4768 HTQREKIT True PC9_epitope_Rep3 1011.5461420869499 1011.54504993586 23.432 2 -0.5371853495843538 0.15606156646675443 0.9676673227757936 ['ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 28386 17569 FRWWRRRWNPR True NCI_RA007_Epitope_Rep1 1714.9181638542595 1714.9170699358601 72.473 2 -0.5371993514780125 0.1560727461847259 0.9676735261131232 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 64561 6522 LPSDWWESYLK True H1975_Epitope_Rep1 1422.6819668534197 1422.68032490379 30.148 3 -0.537233429423282 0.1560727461847259 0.967688625957071 ['ENSG00000158553|ENST00000444565|POM121L2'] 103650 4686 SPTRYQVPSPS True H1975_Epitope_Rep3 1217.60405088589 1217.6023949037901 23.148 3 -0.5372741270964226 0.15610271412319193 0.9677066628939048 ['ENSG00000197768|ENST00000412566|STPG3', 'nc|ENSG00000197768|Q8N7X2-3|STPG3', 'nc|ENSG00000197768|Q8N7X2|STPG3', 'nc|ENSG00000197768|Q8N7X2-1|STPG3'] 69368 8052 LTVTNYRLYFK True NCI_RA007_Epitope_Rep1 1416.7765359446 1416.77488490379 35.317 3 -0.5373228391975952 0.15611135488274586 0.9677282573814118 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 94551 25166 RRRVRRRRMET True PC9_epitope_Rep5 1570.91751223126 1570.9164099358602 101.95 2 -0.5373230608433114 0.15611135488274586 0.9677283556528328 ['nc|ENSG00000203880|Q9NV79-2|PCMTD2', 'ENSG00000203880|ENST00000308824|PCMTD2', 'nc|ENSG00000203880|Q9NV79-3|PCMTD2', 'ENST00000266078.7_1_20:62903543-62904950:+|nuORF'] 32324 23880 GFFAAASF True H1975_Epitope_Rep1 816.3806399016399 816.3800949679301 99.119 1 -0.5373303511259391 0.15611135488274586 0.9677315880280267 ['ENST00000563073.1_1_16:57258382-57272884:+|nuORF', 'ENST00000564530.5_1_16:57254621-57272884:+|nuORF', 'ENSG00000159579|ENST00000394420|RSPRY1'] 1202 2722 AECPPPRQP True H1975_Epitope_Rep2 993.4702002653698 993.46910993586 14.564 2 -0.5373712161181005 0.15613370817556918 0.9677497093473373 ['nc|ENSG00000255529|Q6EEV4-2|POLR2M', 'ENST00000380557.4_2_15:57998925-58001412:+|nuORF', 'ENST00000567643.1_1_15:57998925-57999700:+|nuORF', 'ENST00000299638.7_2_15:57998859-58000941:+|nuORF', 'nc|ENSG00000255529|Q6EEV4|POLR2M'] 71157 14372 LYMEANRQVP True PC9_epitope_Rep2 1219.60194271091 1219.6003049037902 60.543 3 -0.5373883132200264 0.15613370817556918 0.9677572922310428 ['ENSG00000070785|ENST00000360403|EIF2B3', 'nc|ENSG00000070785|Q9NR50-3|EIF2B3', 'nc|ENSG00000070785|Q9NR50-2|EIF2B3'] 108950 6367 TAEAEVLFRDG True NCI_RA007_Epitope_Rep1 1206.5880664685799 1206.58642490379 28.793 3 -0.537390646861215 0.15613370817556918 0.9677583273032417 ['ENSG00000188897|ENST00000696174|unknown'] 126401 5661 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 28.381 3 -0.5373923884331148 0.15613370817556918 0.9677590997759544 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 106631 16676 STRWYRAP True PC9_epitope_Rep5 1035.5250127195497 1035.52390993586 69.147 2 -0.5374261059314993 0.1561474211056583 0.9677740566952516 ['ENSG00000112144|ENST00000676107|CILK1', 'ICK|p.A185Rfs*50|1|0.52|ENSG00000112144|chr6:53018440-53018440|C/-|frameshift_variant', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'nc|ENSG00000080823|Q9UQ07-2|MOK', 'ENST00000518686.5_1_14:102700023-102771389:-|nuORF', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000080823|Q9UQ07-5|MOK', 'nc|ENSG00000080823|Q9UQ07-6|MOK', 'ENSG00000080823|ENST00000361847|MOK'] 68593 9446 LTHKTSNLS True PC9_epitope_Rep3 999.5349086969101 999.53380993586 41.276 2 -0.537536285431913 0.15622359441013975 0.9678229524313188 ['nc|ENSG00000102554|Q13887-3|KLF5'] 117441 5303 TVQELQNC[Carbamidomethyl]AFH True H1975_Epitope_Rep3 1345.60848492276 1345.60738993586 25.478 2 -0.5375752502681388 0.15622359441013975 0.9678402519390755 ['ENST00000381801.5_1_13:25841951-25848212:-|nuORF'] 86424 3660 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 18.885 3 -0.5376157219965907 0.1562296893279605 0.9678582246906738 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 140220 18294 YQVLVEGV True PC9_epitope_Rep5 905.4858332461699 905.48472993586 75.382 2 -0.5376361389226393 0.1562296893279605 0.9678672931069273 ['nc|ENSG00000261371|P16284-5|PECAM1', 'nc|ENSG00000261371|P16284-3|PECAM1', 'nc|ENSG00000261371|P16284-4|PECAM1', 'nc|ENSG00000261371|P16284-2|PECAM1', 'nc|ENSG00000261371|P16284-6|PECAM1', 'ENSG00000261371|ENST00000563924|PECAM1'] 29077 10000 FTIAAKHHIT True NCI_RA007_Epitope_Rep4 1137.62947778809 1137.62782490379 45.309 3 -0.5376406314810986 0.1562296893279605 0.967869288676563 ['ENSG00000125814|ENST00000377026|NAPB', 'nc|ENSG00000125814|Q9H115-2|NAPB', 'nc|ENSG00000125814|Q9H115-3|NAPB'] 67317 8068 LSSCRTVRSWA True PC9_epitope_Rep4 1264.63463982152 1264.6335499358602 38.485 2 -0.5376414984936745 0.1562296893279605 0.9678696738048767 ['ENST00000368090.3_1_1:160001492-160001567:-|nuORF'] 67771 15011 LSYRKISV True PC9_epitope_Rep3 964.5705659296399 964.56946993586 62.866 2 -0.5376941602561498 0.15627589568608335 0.9678930699572897 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant'] 18299 9464 EIRSYRAP True PC9_epitope_Rep3 990.5246783663798 990.52358993586 41.352 2 -0.5377195223565552 0.15628452589848574 0.9679043402445638 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 45080 21451 IPIQDVAI True PC9_epitope_Rep4 867.5065686907499 867.50546993586 90.699 2 -0.5377239611468199 0.15628452589848574 0.967906312907658 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 140224 10622 YQVYRSWWLWR True NCI_RA007_Epitope_Rep2 1641.8204664452498 1641.81883490379 45.916 3 -0.537743282569445 0.15628452589848574 0.9679149002374033 ['ENST00000355622.6_1_9:120474773-120474821:+|nuORF'] 127005 24756 VLRVLRPLK True H1975_Epitope_Rep3 1092.74953335112 1092.74842993586 102.96 2 -0.5377666078749351 0.1563144811451039 0.9679252683954831 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 64493 8271 LPQPPPLLSP True H1975_Epitope_Rep3 1057.61718176889 1057.6160899358601 36.796 2 -0.5379908184635492 0.1563906354080356 0.9680250045327343 ['ENSG00000187634|ENST00000616016|SAMD11', 'ENST00000466827.1_1_1:877519-877869:+|nuORF', 'nc|ENSG00000187634|Q96NU1-1|SAMD11', 'nc|ENSG00000187634|Q96NU1-2|SAMD11', 'nc|ENSG00000187634|Q96NU1-6|SAMD11', 'nc|ENSG00000187634|Q96NU1-4|SAMD11', 'nc|ENSG00000187634|Q96NU1|SAMD11', 'nc|ENSG00000187634|Q96NU1-5|SAMD11'] 131130 8800 VTEGQIPETG True H1975_Epitope_Rep2 1029.4978544818498 1029.4967499358602 38.815 2 -0.5380275505388149 0.1563906354080356 0.968041356995402 ['nc|ENSG00000181781|Q3SX64-2|CIMAP1D', 'ENSG00000181781|ENST00000315489|ODF3L2'] 3833 19924 AGVNKHLW True PC9_epitope_Rep3 923.49773534255 923.49662993586 81.879 2 -0.5380603493151631 0.15642058747075643 0.9680559614978135 ['ENSG00000170190|ENST00000329783|SLC16A5'] 15446 10179 EALGAAKKL True H1975_Epitope_Rep3 899.54401682863 899.54290993586 44.198 2 -0.5380830753203018 0.15643429239842088 0.9680660825426791 ['ENSG00000163283|ENST00000392027|ALPP', 'ENSG00000163286|ENST00000295453|ALPG'] 45456 4590 IQKQFDQDH True NCI_RA007_Epitope_Rep3 1157.5465360097699 1157.54488490379 24.951 3 -0.5381098191466578 0.1564617009178783 0.968077994717011 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 89367 15124 QWTSRKRK True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 66.99 2 -0.5381210291617687 0.1564617009178783 0.9680829884326299 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 86438 11667 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 56.004 3 -0.5381506478138682 0.15649164987978426 0.9680961842674912 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 104245 4230 SQICPGFVIQ True H1975_Epitope_Rep3 1090.5481162329 1090.5470099358602 21.389 2 -0.5382170756702565 0.15653784297480383 0.9681257881742826 ['ENSG00000161551|ENST00000638348|ZNF577'] 43831 5552 IHSKWEKLTKM True PC9_epitope_Rep4 1399.7645913619097 1399.76293490379 28.122 3 -0.5382470142422203 0.15655154488449918 0.9681391343789886 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|52|1|anti-sense'] 140550 24466 YRPKQRLRF True NCI_RA007_Epitope_Rep2 1262.7360085453 1262.73490993586 102.78 2 -0.5383005366358529 0.15655507366437632 0.9681630000310075 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3'] 94322 2954 RRRKRKKRK True NCI_RA007_Epitope_Rep1 1310.8959718576996 1310.89432490379 15.338 3 -0.5383061221988145 0.15655507366437632 0.9681654910871313 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 44715 14656 ILVLSYFRYMR True PC9_epitope_Rep1 1459.80097687063 1459.79932490379 61.196 3 -0.5383305850758169 0.15655507366437632 0.9681764020782828 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 18576 8856 EKQEEERSK True NCI_RA007_Epitope_Rep1 1161.56257999673 1161.5614899358602 38.448 2 -0.5383461508196805 0.15655507366437632 0.9681833456036557 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000555679.5_1_14:90722941-90730197:+|nuORF'] 91230 14510 RGGGAFGG True NCI_RA007_Epitope_Rep2 677.32452200785 677.3239749679301 61.104 1 -0.538352803604268 0.15655507366437632 0.9681863134630024 ['ENST00000587887.5_1_19:2476414-2477062:+|nuORF', 'ENST00000215631.8_1_19:2476379-2477062:+|nuORF', 'ENST00000593043.1_3_19:2476502-2477062:+|nuORF'] 34346 9554 GPDMPRGCDP True H1975_Epitope_Rep3 1043.41645044035 1043.4153499358601 41.758 2 -0.5384790639398718 0.15663374699499708 0.9682426623015857 ['ENSG00000088053|ENST00000310373|GP6'] 44865 6206 INIFGENPS True H1975_Epitope_Rep3 989.4818104948899 989.48070993586 28.884 2 -0.5385141679556764 0.1566474457890035 0.9682583367314797 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 39520 17202 HLFHMLFE True PC9_epitope_Rep1 1072.5164221818 1072.51587496793 70.986 1 -0.5385489370696601 0.15666114413799825 0.9682738649927266 ['ENSG00000067992|ENST00000379162|PDK3', 'nc|ENSG00000067992|Q15120-2|PDK3'] 131721 10187 VTPDPQRRP True NCI_RA007_Epitope_Rep1 1064.57269118796 1064.5715899358602 43.636 2 -0.5386912639329352 0.1567159330842943 0.9683374648080628 ['ENST00000272427.10_1_2:72406343-72406460:-|nuORF'] 94613 24947 RRTRRLHILP True PC9_epitope_Rep3 1316.8265548851998 1316.8254499358602 101.31 2 -0.5386976639151754 0.1567159330842943 0.9683403260179263 ['ENST00000489156.1_1_6:152623240-152623372:-|nuORF'] 57340 8110 LEAELGPSPP True H1975_Epitope_Rep1 1008.5127762699999 1008.51166993586 36.14 2 -0.5387438292637092 0.1567159330842943 0.9683609683466334 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 123918 5606 VGRSVHLQTE True PC9_epitope_Rep5 1124.59382055536 1124.59272993586 26.567 2 -0.5387448546901165 0.1567159330842943 0.9683614269227439 ['ENST00000493762.1_1_3:169650279-169650495:+|nuORF'] 3178 7846 AGECSLLAA True H1975_Epitope_Rep3 833.3953039896098 833.39475496793 35.157 1 -0.538837360116668 0.15675702012245626 0.9684028080203578 ['ENSG00000151229|ENST00000280871|SLC2A13'] 127241 16130 VLWWIGIL True PC9_epitope_Rep4 998.5953241254998 998.59422993586 69.983 2 -0.5388726760845937 0.15675702012245626 0.968418612529852 ['ENSG00000164535|ENST00000297056|DAGLB', 'nc|ENSG00000164535|Q8NCG7-3|DAGLB', 'nc|ENSG00000164535|Q8NCG7-4|DAGLB'] 35997 9000 GTWGSSAA True NCI_RA007_Epitope_Rep4 735.3187679210699 735.3182149679301 41.451 1 -0.5389005233498998 0.15675702012245626 0.9684310771549707 ['ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000427750.2_1_11:57068016-57070427:-|nuORF'] 110541 13397 TFNDNPLY True H1975_Epitope_Rep3 982.4396113297398 982.43850993586 56.798 2 -0.5389932390082177 0.15678440925700365 0.9684725931832748 ['ENSG00000134115|ENST00000446702|CNTN6', 'CNTN6|p.M222Ifs*5|1|0.23|ENSG00000134115|chr3:1297894-1297895|-/T|frameshift_variant', 'ENST00000394261.2_1_3:1189741-1339676:+|nuORF'] 117053 23557 TVIDQIPFLAV True PC9_epitope_Rep2 1214.6910749851402 1214.68996993586 96.086 2 -0.5390306411616168 0.15678440925700365 0.9684893479731278 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 121322 6026 VEVASEKKTDP True H1975_Epitope_Rep2 1201.61903224369 1201.61792993586 28.157 2 -0.5391907332170741 0.15679555678256493 0.9685611085958256 ['ENST00000556933.1_1_14:65067322-65068336:-|nuORF'] 95064 6747 RTTFVVGG True NCI_RA007_Epitope_Rep3 835.4552018242298 835.4546549679301 33.631 1 -0.5391937983291073 0.15679555678256493 0.9685624832386908 ['ENST00000397722.5_1_16:450423-450627:+|nuORF'] 61131 23457 LIIIKDLLLLI True PC9_epitope_Rep6 1278.8890465156999 1278.8874149037902 103.33 3 -0.5392046647198566 0.1568092500568385 0.9685673568209062 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 84299 7564 PYRQRWAWRTW True NCI_RA007_Epitope_Rep1 1604.8112987438797 1604.8096649037902 33.414 3 -0.5392271631298498 0.1568229428863736 0.9685774484531059 ['ENST00000491400.5_1_6:35254110-35255623:+|nuORF', 'ENST00000469195.5_3_6:35254110-35258154:+|nuORF', 'ENST00000229405.8_1_6:35254110-35258558:+|nuORF'] 81869 16759 PLRGRLRQH True NCI_RA007_Epitope_Rep3 1131.67374264191 1131.6726499358601 73.766 2 -0.5392395400873449 0.156828995014858 0.9685830007443753 ['ZAN|p.E2695Rfs*83|1|0.75|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant', 'ENSG00000146839|ENST00000613979|ZAN'] 15610 6198 EARSEILA True H1975_Epitope_Rep2 887.4712458111899 887.47014993586 28.812 2 -0.5392445443822323 0.156828995014858 0.9685852457919519 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant', 'ENSG00000135631|ENST00000486777|RAB11FIP5'] 121776 4839 VFNQQAHL True NCI_RA007_Epitope_Rep5 955.4875645816699 955.48646993586 25.305 2 -0.5392666000027125 0.156828995014858 0.9685951413391346 ['ZNF761|p.G696Afs*77|1|0.12|ENSG00000160336|chr19:53456593-53456593|G/-|frameshift_variant', 'ENST00000474037.5_1_19:53886174-53886573:+|nuORF', 'nc|ENSG00000198538|P17035-2|ZNF28', 'ENSG00000198538|ENST00000457749|ZNF28', 'ENSG00000213799|ENST00000458035|ZNF845'] 141075 10208 YSPAQSQATIY True H1975_Epitope_Rep2 1227.57716743171 1227.5755349037902 44.27 3 -0.5392905116286398 0.156828995014858 0.9686058711987413 ['ENSG00000181555|ENST00000409792|SETD2'] 88778 9490 QTQQEEREVAL True NCI_RA007_Epitope_Rep1 1329.65245763029 1329.6513699358602 40.909 2 -0.5393267774510881 0.15685637736461802 0.9686221479183312 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 67768 14895 LSYRKISV True PC9_epitope_Rep1 964.5705659296399 964.56946993586 62.114 2 -0.5393345817918623 0.15685637736461802 0.9686256511387663 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant'] 136261 8197 WRWVWSWEWAR True NCI_RA007_Epitope_Rep1 1646.7895006701401 1646.78785490379 35.882 3 -0.5393755694838503 0.15686752074301394 0.9686440526429042 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 117834 15565 TVYDRTTVL True PC9_epitope_Rep5 1066.5658744720201 1066.56476993586 64.88 2 -0.5393765860952932 0.15686752074301394 0.9686445091147241 ['ENSG00000188786|ENST00000373036|MTF1'] 89368 15209 QWTSRKRK True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 67.346 2 -0.5394072355600904 0.15688121062544652 0.9686582725389191 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 83544 17490 PTVPTVPTV True PC9_epitope_Rep4 909.5171333744499 909.51602993586 75.276 2 -0.5394434897626449 0.156894900063323 0.9686745563605361 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 70984 19183 LYHDIFSRL True PC9_epitope_Rep3 1162.61349337078 1162.6118549037901 79.005 3 -0.5394797943254003 0.15690444494951133 0.9686908666518262 ['ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 58936 10524 LETQKLDLMT True PC9_epitope_Rep1 1190.6216750959798 1190.6205699358602 45.371 2 -0.5395438005134311 0.15690444494951133 0.9687196316615867 ['ENST00000530189.1_1_11:7618841-7631707:+|nuORF', 'ENST00000532926.5_1_11:7598800-7674592:+|nuORF', 'nc|ENSG00000166387|Q8ND30-2|PPFIBP2', 'ENSG00000166387|ENST00000299492|PPFIBP2', 'nc|ENSG00000166387|Q8ND30-3|PPFIBP2'] 89950 16195 RDDFYEWE True H1975_Epitope_Rep3 1158.4618033263 1158.46015490379 67.75 3 -0.5395489524708109 0.15690444494951133 0.9687219475249099 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1'] 113852 11795 TNHSYITI True PC9_epitope_Rep5 947.47124581119 947.47014993586 50.367 2 -0.5395692182017146 0.15690444494951133 0.9687310579584185 ['ENST00000418303.1_1_7:43958366-43959461:+|nuORF'] 63404 11474 LLVKPEVLL True NCI_RA007_Epitope_Rep4 1022.6739683690199 1022.6728699358599 51.068 2 -0.5396137929241526 0.15690444494951133 0.9687511007233982 ['ENST00000605778.1_1_7:35735152-35735278:+|nuORF'] 84754 19110 QDTFSVAVSF True PC9_epitope_Rep4 1099.51858992643 1099.51807496793 81.598 1 -0.5396535321941175 0.15690444494951133 0.9687689741976849 ['ENSG00000179094|ENST00000317276|PER1', 'nc|ENSG00000179094|O15534-4|PER1', 'ENST00000579065.1_1_17:8052750-8054072:-|nuORF'] 57929 11403 LEGILRELKE True H1975_Epitope_Rep1 1198.6921376142998 1198.69104993586 48.841 2 -0.5397098272081149 0.15690444494951133 0.9687943019202309 ['ENSG00000205363|ENST00000569673|INSYN1'] 16759 6387 EETLDEGPP True H1975_Epitope_Rep2 985.4240208352498 985.42292993586 29.491 2 -0.5397124696353938 0.15690444494951133 0.9687954910069531 ['ENSG00000100442|ENST00000396062|FKBP3'] 18252 8341 EIQEGKEDP True H1975_Epitope_Rep3 1043.4771190372699 1043.4760299358602 37.069 2 -0.5397558803646695 0.15690444494951133 0.9688150287111903 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3'] 75444 18726 NIYVDLVI True H1975_Epitope_Rep1 947.5327834385898 947.53168993586 78.087 2 -0.5398157533705727 0.1569181317878537 0.9688419847265124 ['OXCT2|p.R268L|1|0.05|ENSG00000198754|chr1:39770453-39770453|C/A|missense_variant'] 131803 9851 VTQGHHLDP True H1975_Epitope_Rep1 1002.4882928576599 1002.48718993586 42.824 2 -0.5398712318085188 0.15692672315833903 0.9688669717639071 ['ENST00000575922.5_1_17:79205391-79205703:+|nuORF'] 79464 11451 PAVSENSDLEQ True NCI_RA007_Epitope_Rep2 1187.53061116211 1187.52950993586 49.134 2 -0.5398825374112886 0.15692672315833903 0.968872064844039 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 33047 9348 GILDRTISV True PC9_epitope_Rep5 972.56039516876 972.55928993586 40.911 2 -0.5398886377279692 0.15692672315833903 0.968874813144947 ['ENSG00000137767|ENST00000260324|SQOR'] 46932 11936 ITNVPCIFSP True H1975_Epitope_Rep1 1089.55286726017 1089.5517699358602 50.915 2 -0.5399581807794324 0.15694040874632728 0.9689061514090282 ['nc|ENSG00000273749|Q7L576-2|CYFIP1'] 48923 13148 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69015490379 55.696 3 -0.5399950483298981 0.15695409389000714 0.9689227709676062 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 79398 15869 PASSSTKLL True PC9_epitope_Rep5 902.50729696674 902.50618993586 66.032 2 -0.5400005308907738 0.1569677785894002 0.9689252428059463 ['ENSG00000102313|ENST00000218436|ITIH6', 'ITIH6|p.S731Qfs*9|1|0.37|ENSG00000102313|chrX:54757884-54757884|G/-|frameshift_variant'] 57123 13190 LDTEAGRCVP True PC9_epitope_Rep1 1059.5018943164698 1059.5007899358602 55.599 2 -0.540008393380631 0.15698146284452813 0.9689287878045085 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 7392 5511 ARWWRQGRLAI True PC9_epitope_Rep2 1411.7949204037498 1411.79326490379 26.589 3 -0.5400677537116653 0.15702506168030125 0.9689555579007191 ['LTR2C_dup54|chr2:231400712-231401206:+|4.576876258162113|0.310476164059117|3.88|541.0|34|3|anti-sense'] 99806 13331 SIKLTCTLS True PC9_epitope_Rep5 964.52631815916 964.52522993586 56.29 2 -0.5400678489653556 0.15702506168030125 0.9689556008664182 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 80015 16540 PFETFQVI True PC9_epitope_Rep5 979.5014833103099 979.50038993586 68.623 2 -0.5401118966325501 0.15703874433930107 0.9689754722121623 ['ENSG00000129744|ENST00000250693|ART1'] 105502 6251 SSAASAFKVP True NCI_RA007_Epitope_Rep3 963.5025459394699 963.50144993586 31.592 2 -0.5401631155180812 0.15705242655413082 0.9689985861239024 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2', 'ENST00000486796.1_1_3:33686156-33700574:-|nuORF'] 15534 5993 EAPGECCKK True H1975_Epitope_Rep3 963.4153878111899 963.41428993586 28.065 2 -0.5401764491802759 0.15706610832481213 0.9690046046075985 ['nc|ENSG00000198788|Q02817|MUC2'] 127749 16592 VPAVVLQA True PC9_epitope_Rep4 795.4854393233499 795.48489496793 71.797 1 -0.540196477864619 0.15709602025579433 0.9690136460739577 ['ENST00000430184.1_1_20:61364051-61366679:-|nuORF'] 126449 15473 VLKWQQIL True PC9_epitope_Rep5 1026.6226015025 1026.62150993586 64.528 2 -0.5403319110064425 0.15712593121581483 0.9690748162096627 ['ENST00000500268.6_1_4:10456341-10456455:-|nuORF'] 10452 6309 CIEEGEKPMVI True H1975_Epitope_Rep3 1246.59374609598 1246.5926499358602 29.272 2 -0.5403491931888332 0.15713961112734118 0.969082625968993 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 113551 5544 TLTSDLGP True H1975_Epitope_Rep2 802.4072485722999 802.40614993586 26.332 2 -0.5404713321151087 0.15720198003732858 0.9691378463088922 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-4|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1', 'ENST00000473483.1_1_1:201182298-201185067:+|nuORF'] 75443 4555 NIYRLVTK True NCI_RA007_Epitope_Rep5 1005.5971150306499 1005.59600993586 24.18 2 -0.5404973138878908 0.15721055535720083 0.9691495988841698 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 46333 11199 ISQSYILML True PC9_epitope_Rep5 1066.5732683515798 1066.57216993586 48.064 2 -0.5405012411283336 0.15721055535720083 0.9691513755106658 ['ENST00000493541.1_1_6:83839942-83844118:+|nuORF'] 29301 18229 FVDDNYVIR True PC9_epitope_Rep4 1139.56112344475 1139.56002993586 78.188 2 -0.5405068042152639 0.15721055535720083 0.9691538922519893 ['CPS1|p.H1447D|1|0.21|ENSG00000021826|chr2:210677071-210677071|C/G|missense_variant'] 81989 21260 PLTSLALHL True PC9_epitope_Rep5 963.57531695691 963.57420993586 86.827 2 -0.5405221941895649 0.15722423278534217 0.9691608551775045 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 15892 9790 EDKGLYGGSSY True H1975_Epitope_Rep1 1174.51423282198 1174.5131299358602 42.585 2 -0.5405368618889829 0.15725158630986188 0.969167492004913 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D'] 113937 13905 TPAAADICFT True PC9_epitope_Rep4 1008.45863252216 1008.45752993586 61.389 2 -0.5405456500187162 0.15725158630986188 0.9691714687692832 ['ENST00000483780.5_1_X:153641548-153647973:+|nuORF', 'ENST00000426231.5_2_X:153641633-153647973:+|nuORF', 'ENST00000476679.5_1_X:153641063-153647973:+|nuORF', 'nc|ENSG00000102125|Q16635-9|TAFAZZIN', 'nc|ENSG00000102125|Q16635-8|TAFAZZIN', 'nc|ENSG00000102125|Q16635-7|TAFAZZIN', 'nc|ENSG00000102125|Q16635-6|TAFAZZIN', 'nc|ENSG00000102125|Q16635|TAFAZZIN', 'nc|ENSG00000102125|Q16635-4|TAFAZZIN', 'nc|ENSG00000102125|Q16635-2|TAFAZZIN', 'nc|ENSG00000102125|Q16635-5|TAFAZZIN', 'ENSG00000102125|ENST00000601016|TAFAZZIN'] 38869 4152 HHDSHSSVIL True PC9_epitope_Rep4 1130.5468703629401 1130.54521490379 22.3 3 -0.5406175033069078 0.15726526240628347 0.9692039924831295 ['ENSG00000129315|ENST00000261900|CCNT1'] 93191 12076 RPPLTTTATV True H1975_Epitope_Rep3 1055.5975089534702 1055.59640993586 51.614 2 -0.5407283397077769 0.15730628803245436 0.9692541930615954 ['nc|ENSG00000136099|O95206-2|PCDH8', 'ENSG00000136099|ENST00000377942|PCDH8'] 59860 12789 LGFTGAGIAA True PC9_epitope_Rep4 876.4705175351999 876.46942993586 57.056 2 -0.5407423504022351 0.15730628803245436 0.9692605415882071 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 35313 5993 GRNDGLETI True PC9_epitope_Rep2 973.48287312405 973.48176993586 28.44 2 -0.5407444334732888 0.15730628803245436 0.9692614855219595 ['SPATA18|p.V71L|1|0.19|ENSG00000163071|chr4:52060799-52060799|G/T|missense_variant'] 58842 11733 LESSSSIY True H1975_Epitope_Rep3 884.41272787556 884.41217496793 50.273 1 -0.5407765401653284 0.15730975174428038 0.9692760362369677 ['CEP126|p.P802Lfs*14|1|0.08|ENSG00000110318|chr11:101963437-101963438|-/CTTAGTTTTAGAA|frameshift_variant'] 12105 16875 DIAILPVVAS True H1975_Epitope_Rep3 996.5855472874399 996.58444993586 70.461 2 -0.5407856276944184 0.15730975174428038 0.9692801552814604 ['FMNL2|p.L1058Qfs*20|1|0.19|ENSG00000157827|chr2:152647799-152647800|TT/-|frameshift_variant', 'nc|ENSG00000157827|Q96PY5|FMNL2', 'ENSG00000157827|ENST00000288670|FMNL2'] 20012 10074 ELYGRLYR True PC9_epitope_Rep3 1068.5716285587998 1068.5705299358601 43.703 2 -0.5407915727079392 0.15730975174428038 0.9692828500788562 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 11122 4572 DDDMNEDTVER True H1975_Epitope_Rep3 1337.5041387140898 1337.5030499358602 22.707 2 -0.5407950656948053 0.15730975174428038 0.9692844334561769 ['ENSG00000164620|ENST00000297164|RELL2', 'ENST00000520674.5_1_5:141017792-141019494:+|nuORF', 'ENST00000518025.5_1_5:141017849-141019494:+|nuORF'] 56327 15551 LDCHISICSP True PC9_epitope_Rep5 1086.48380172418 1086.4827099358602 64.827 2 -0.540805692003004 0.15730975174428038 0.9692892506166879 ['ENSG00000145191|ENST00000648915|EIF2B5', 'ENST00000481054.5_1_3:183853173-183856676:+|nuORF', 'ENST00000468748.5_1_3:183855785-183858017:+|nuORF', 'ENST00000479833.1_1_3:183855956-183859823:+|nuORF', 'ENST00000491144.5_1_3:183855641-183858240:+|nuORF'] 72961 9249 MQEESAAPERG True PC9_epitope_Rep5 1203.5190009325897 1203.5179099358602 40.523 2 -0.5409149873643078 0.1573234248998069 0.9693388174529052 ['ENSG00000162592|ENST00000294600|CCDC27'] 10575 9847 CMSLHGGIDQY True H1975_Epitope_Rep3 1222.51107910118 1222.5099899358602 42.906 2 -0.5409295281979694 0.15735332294911733 0.9693454147460857 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 82442 4145 PPPPHPPPP True NCI_RA007_Epitope_Rep5 931.4915873329498 931.49048993586 22.446 2 -0.5409368035610543 0.15736699495400192 0.969348715887739 ['nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8'] 41622 5007 IADSTDHVFP True NCI_RA007_Epitope_Rep1 1100.51383889916 1100.51274993586 23.56 2 -0.5410296898421977 0.157413116137197 0.9693908770711955 ['ANTXR1|p.K195T|1|0.06|ENSG00000169604|chr2:69077430-69077430|A/C|missense_variant'] 19799 22123 ELSLMQPLV True PC9_epitope_Rep3 1028.55761828744 1028.55652993586 90.394 2 -0.5410594851748481 0.15744301127606067 0.969404406991556 ['ENST00000521314.5_1_16:67198707-67203685:+|nuORF', 'nc|ENSG00000102878|Q9ULV5-2|HSF4', 'ENSG00000102878|ENST00000521374|HSF4', 'ENST00000523562.5_1_16:67201036-67203307:+|nuORF'] 141102 14210 YSQHTQMV True H1975_Epitope_Rep1 992.4385657839199 992.43801496793 59.837 1 -0.5410844747262717 0.15745668116036082 0.9694157567954921 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-4|IL17RE', 'ENST00000383815.7_1_3:9944714-9956386:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-2|IL17RE', 'ENST00000483258.1_1_3:9952571-9953043:+|nuORF'] 119114 13150 VAGWSGGGPTI True PC9_epitope_Rep1 1000.4977949121999 1000.49668993586 55.446 2 -0.5411013276430329 0.15746524116225116 0.9694234122020686 ['ENSG00000106410|ENST00000467773|NOBOX'] 19401 9450 ELLWGHRFEP True NCI_RA007_Epitope_Rep1 1282.6458561282202 1282.64474993586 40.752 2 -0.541108230465628 0.15746524116225116 0.9694265480559419 ['ENSG00000182324|ENST00000342291|KCNJ14'] 121493 15387 VEYQHNLF True PC9_epitope_Rep6 1048.4977949121999 1048.49668993586 71.334 2 -0.541117009794231 0.15746524116225116 0.9694305365974605 ['ENST00000249861.8_1_15:71174569-71174695:-|nuORF'] 53126 2616 KPTLYYKDK True NCI_RA007_Epitope_Rep4 1154.63356010902 1154.63191490379 14.684 3 -0.5411376032346201 0.15749513303049967 0.9694398933709202 ['ENSG00000091583|ENST00000205948|APOH'] 28415 12913 FSAFRILRSR True PC9_epitope_Rep1 1251.7200241279897 1251.71836490379 54.543 3 -0.5412104426897566 0.15753357991045358 0.9694729992429215 ['ENSG00000084754|ENST00000380649|HADHA', 'nc|ENSG00000084754|P40939-2|HADHA', 'HADHA|p.L175Ffs*26|1|0.07|ENSG00000084754|chr2:26232208-26232208|C/-|frameshift_variant'] 60685 15238 LHNFWKRYLQK True PC9_epitope_Rep3 1531.84120188983 1531.83955490379 63.761 3 -0.5412150481541959 0.15753357991045358 0.9694750930115303 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B', 'ENST00000402170.5_1_2:9983670-10008796:+|nuORF'] 22071 7622 ESMDPEVPG True H1975_Epitope_Rep2 959.3906125319899 959.38950993586 34.271 2 -0.5412349790144728 0.15753357991045358 0.9694841548916984 ['ENST00000424235.1_1_20:37059633-37059732:-|nuORF', 'ENST00000436764.5_1_20:37055081-37059732:-|nuORF', 'ENST00000414142.5_1_20:37055081-37059732:-|nuORF'] 85518 11197 QGAGSVLF True NCI_RA007_Epitope_Rep4 777.40210362221 777.40100993586 49.956 2 -0.54123685370329 0.15753357991045358 0.9694850073131147 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 61112 26498 LIIIKDLLLLI True H1975_Epitope_Rep3 1278.8890465156999 1278.8874149037902 110.62 3 -0.5412908397411793 0.15753957954840384 0.9695095595377703 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 136189 23640 WRRRRRSISR True PC9_epitope_Rep4 1427.8446645608299 1427.8435699358602 99.274 2 -0.5413078296967767 0.15753957954840384 0.9695172882761763 ['ENSG00000154736|ENST00000284987|ADAMTS5', 'ADAMTS5|p.G894Vfs*16|1|0.13|ENSG00000154736|chr21:26924165-26924165|C/-|frameshift_variant', 'ADAMTS5|p.A277Rfs*16|1|0.22|ENSG00000154736|chr21:26965563-26965563|C/-|frameshift_variant'] 102417 7834 SLTLSAPS True NCI_RA007_Epitope_Rep4 774.41233395274 774.4117849679301 36.832 1 -0.541313545055252 0.15753957954840384 0.9695198884000804 ['ENSG00000159433|ENST00000290607|STARD9'] 31936 11771 GENCERVP True PC9_epitope_Rep1 902.3916155914999 902.39050993586 50.15 2 -0.5413237028424581 0.15753957954840384 0.9695245098003701 ['ENSG00000132842|ENST00000255194|AP3B1', 'nc|ENSG00000132842|O00203-3|AP3B1', 'AP3B1|p.L559Gfs*12|1|0.13|ENSG00000132842|chr5:78129284-78129285|-/GTCTAGCATAGTATGAAGAAATCCCGTTTCCA|frameshift_variant'] 119792 3309 VCNRHCENGG True PC9_epitope_Rep1 1087.42874645955 1087.42764993586 17.631 2 -0.5413912619441192 0.1575506893755069 0.9695552548602572 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 33843 5161 GLPCICIHPV True NCI_RA007_Epitope_Rep3 1050.53544337422 1050.53434993586 27.294 2 -0.5414000915019755 0.1575506893755069 0.9695592741134704 ['ENST00000360004.5_2_6:32546592-32546676:-|nuORF'] 122987 4159 VGICSMAK True NCI_RA007_Epitope_Rep4 807.39828119507 807.39718993586 22.291 2 -0.5414098340945123 0.15756179848180107 0.9695637092692708 ['nc|ENSG00000145725|O43314-2|PPIP5K2', 'ENSG00000145725|ENST00000358359|PPIP5K2'] 5935 7078 APGSDTPLPA True PC9_epitope_Rep2 924.4552613938799 924.45416993586 32.623 2 -0.5414118955249065 0.15756179848180107 0.9695646477400736 ['ENST00000562955.2_2_1:43919018-43919642:+|nuORF'] 106926 15999 SVDRQLKTL True PC9_epitope_Rep1 1058.6084079903399 1058.60730993586 66.351 2 -0.5414181968492018 0.15756523995653374 0.969567516515123 ['ENST00000418273.2_1_10:88729397-88729505:-|nuORF'] 67125 15116 LSQLQALALP True H1975_Epitope_Rep2 1052.62299542532 1052.62188993586 63.298 2 -0.541418596114916 0.15756523995653374 0.9695676982912124 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 66575 13258 LSIISSSALI True PC9_epitope_Rep2 1002.59611197114 1002.59500993586 56.271 2 -0.5414790753821931 0.15756523995653374 0.9695952388503055 ['ADGRB1|p.N995S|1|0.35|ENSG00000181790|chr8:142520885-142520885|A/G|missense_variant'] 12624 10277 DLAPPQKGL True H1975_Epitope_Rep2 937.5232813840499 937.52218993586 44.537 2 -0.5415377923832255 0.15756523995653374 0.9696219879458217 ['ENST00000269720.6_1_19:14184534-14185567:+|nuORF'] 135336 14329 WGKLLCLP True H1975_Epitope_Rep2 928.52044493308 928.51934993586 60.266 2 -0.5415588485577655 0.15756523995653374 0.9696315829331303 ['ENST00000569839.1_1_16:57608733-57625590:+|nuORF'] 116940 4417 TVGAAGWK True NCI_RA007_Epitope_Rep4 788.4180880395201 788.41698993586 23.352 2 -0.5415867387054274 0.15757379176127148 0.969644294208972 ['ENSG00000128951|ENST00000331200|DUT'] 118992 7929 VAEPLKTHHSI True PC9_epitope_Rep2 1230.6720708760602 1230.67042490379 35.863 3 -0.5416210452828235 0.15757379176127148 0.9696599332076284 ['ENST00000520838.1_1_5:138080350-138088780:-|nuORF'] 128956 16140 VQILCCLLI True PC9_epitope_Rep1 1016.5762455570399 1016.5751499358599 66.897 2 -0.5416304230919547 0.15757379176127148 0.9696642088205746 ['ENSG00000166927|ENST00000300184|MS4A7'] 114614 5694 TQDSADRQMWR True H1975_Epitope_Rep1 1392.62044630936 1392.61934993586 26.969 2 -0.5416680591012776 0.157574676482989 0.9696813709416697 ['chr1:225879410-225883972|125|12.91|0.46|4.82|-|1|TMEM63A,None|1'] 98393 13746 SFCIQPCVL True PC9_epitope_Rep5 1008.4772597917598 1008.47616993586 57.895 2 -0.5417383076740014 0.157574676482989 0.9697134163889112 ['LTR88b_dup1331|chr15:56885665-56885983:-|1.0230040811160397|0.0198811332927147|5.69|539.0|8|3|sense'] 137901 9569 YEWWFRWRLDR True H1975_Epitope_Rep1 1711.8371791385496 1711.8360899358602 41.73 2 -0.5417401588967004 0.157574676482989 0.9697142610749412 ['ENSG00000127995|ENST00000297273|CASD1'] 16819 9886 EEWGDVPLSPG True H1975_Epitope_Rep1 1184.5349682665599 1184.5338699358601 42.96 2 -0.5417441490983047 0.157574676482989 0.9697160817825826 ['ENSG00000188070|ENST00000433688|ZFTA'] 68370 11229 LTEQPLEGL True H1975_Epitope_Rep2 998.5284263341398 998.5273299358599 48.234 2 -0.5417982744131943 0.157574676482989 0.9697407838128023 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-12|DMD', 'nc|ENSG00000198947|P11532-14|DMD', 'nc|ENSG00000198947|P11532-15|DMD', 'nc|ENSG00000198947|P11532-16|DMD', 'nc|ENSG00000198947|P11532-13|DMD', 'nc|ENSG00000198947|P11532-17|DMD'] 33554 11320 GLELLTSDDL True PC9_epitope_Rep6 1074.5444703211 1074.54336993586 54.562 2 -0.5418074115182123 0.157574676482989 0.9697449547659671 ['ENST00000400479.6_1_7:6048951-6054828:+|nuORF'] 37247 21909 GVRKEWSL True PC9_epitope_Rep3 973.5345147740899 973.53340993586 89.577 2 -0.5418290774121315 0.1575883373603386 0.9697548459730023 ['ENST00000523135.1_1_5:179680521-179691830:-|nuORF'] 62358 8873 LLGNPEFAAP True PC9_epitope_Rep6 1027.53384606775 1027.53274993586 44.069 2 -0.5419458132289573 0.15759944218326874 0.9698081651260099 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO'] 98854 8673 SGTSDPYVKI True NCI_RA007_Epitope_Rep1 1065.5342399905699 1065.5331499358601 37.738 2 -0.5420008781963885 0.15759944218326874 0.9698333309082878 ['ENSG00000170743|ENST00000318881|SYT9'] 18184 8914 EILFGEKM[Oxidation]TSI True H1975_Epitope_Rep1 1282.64789022426 1282.6467899358602 39.191 2 -0.5421019614307819 0.15760287965755423 0.9698795526629124 ['TPTE|p.S544I|1|0.28|ENSG00000274391|chr21:10605527-10605527|G/T|missense_variant'] 83889 9139 PVPPRTGPPRL True NCI_RA007_Epitope_Rep4 1185.6982260542497 1185.6965849037902 41.992 3 -0.5421062663125701 0.15760287965755423 0.9698815218415501 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'ARAP1|p.F360Lfs*31|1|0.27|ENSG00000186635|chr11:72711442-72711442|A/-|frameshift_variant'] 68664 14693 LTIVNSSVL True PC9_epitope_Rep5 944.55424715916 944.55314993586 61.52 2 -0.5421092151693483 0.15760287965755423 0.9698828707682062 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1'] 113764 14066 TMLARLPSNF True PC9_epitope_Rep2 1148.60121443492 1148.59957490379 59.381 3 -0.5421105784904464 0.15760287965755423 0.969883494415749 ['nc|ENSG00000198198|Q5T011-7|SZT2'] 140978 9179 YSGKEGDKFK True NCI_RA007_Epitope_Rep2 1157.57168812845 1157.5705899358602 40.313 2 -0.5421395244949856 0.15760287965755423 0.96989673705909 ['ENST00000468373.1_1_1:153516388-153518231:-|nuORF', 'ENSG00000196154|ENST00000368716|S100A4'] 130003 13654 VRWRMRKLK True NCI_RA007_Epitope_Rep3 1271.77609953547 1271.77444490379 61.018 3 -0.5421435240099965 0.15761398274855698 0.969898567021997 ['nc|ENSG00000136270|Q969Z0-2|TBRG4', 'ENSG00000136270|ENST00000258770|TBRG4'] 13248 15875 DLSSRSLLGI True PC9_epitope_Rep4 1059.59242357303 1059.5913299358601 68.992 2 -0.5421473753091529 0.15761398274855698 0.9699003292165731 ['ENSG00000117724|ENST00000366955|CENPF'] 23460 13715 EVTNLIPDI True H1975_Epitope_Rep2 1012.5440763982799 1012.54296993586 57.899 2 -0.5421618693135639 0.1576276407737082 0.9699069614868252 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 142937 20153 YYYRRRHRHER True H1975_Epitope_Rep1 1690.8665222042198 1690.8654299358602 83.868 2 -0.5421851561393137 0.1576387425217659 0.9699176186143305 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 102204 9025 SLSAKASLGSL True NCI_RA007_Epitope_Rep4 1032.5815245361598 1032.5804299358601 41.547 2 -0.5421932282343842 0.1576387425217659 0.9699213131736175 ['ENST00000515519.5_1_5:148443020-148443128:+|nuORF'] 101986 19569 SLQLAWTPV True PC9_epitope_Rep4 1013.55458151233 1013.55348993586 83.395 2 -0.5421985662370971 0.1576498435498776 0.9699237564637679 ['nc|ENSG00000100197|P10635-2|CYP2D6', 'ENSG00000100197|ENST00000645361|CYP2D6', 'nc|ENSG00000205702|A0A087X1C5|CYP2D7'] 921 8662 ADLVPRRGYQE True NCI_RA007_Epitope_Rep2 1302.6680481247802 1302.6669499358602 38.34 2 -0.5422030511026024 0.1576498435498776 0.9699258093280568 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'nc|ENSG00000066827|Q9P243-3|ZFAT'] 17 11090 AAAAAEPPAP True PC9_epitope_Rep1 864.4341320264799 864.43302993586 47.545 2 -0.5422715546600713 0.1576959242566713 0.9699571733752121 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.E97Nfs*14|1|0.89|ENSG00000139687|chr13:48342622-48342622|G/-|frameshift_variant', 'RB1|p.N133*|1|0.93|ENSG00000139687|chr13:48345092-48345093|-/T|frameshift_variant', 'RB1|p.F131Lfs*4|1|0.7|ENSG00000139687|chr13:48345090-48345093|TTCT/-|frameshift_variant'] 91487 8526 RHRRYKHTHEK True NCI_RA007_Epitope_Rep1 1546.8341594467795 1546.8325049037899 37.166 3 -0.5422999716403417 0.1577070228908631 0.9699701882628338 ['ENSG00000102974|ENST00000264010|CTCF', 'nc|ENSG00000102974|P49711-2|CTCF', 'nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL'] 102943 14373 SPEAVAGVGF True PC9_epitope_Rep4 932.4603467743199 932.45924993586 63.193 2 -0.5423025550983539 0.1577070228908631 0.9699713716034851 ['ENSG00000198932|ENST00000537097|GPRASP1'] 32994 6561 [Acetylation]-GIGDEIEDP True H1975_Epitope_Rep2 985.4240211515499 985.42347496793 30.147 1 -0.5423389360306801 0.15771556405725679 0.9699880379284634 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.G4836E|1|0.11|ENSG00000198626|chr1:237819109-237819109|G/A|missense_variant', 'ENST00000608590.5_1_1:237955470-237994843:+|nuORF', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 57174 5108 LDVDMVFRNPW True NCI_RA007_Epitope_Rep1 1390.6703566238998 1390.66870490379 23.954 3 -0.542355916188374 0.15771556405725679 0.9699958180549137 ['nc|ENSG00000148288|Q8N5D6-3|GBGT1', 'ENSG00000148288|ENST00000372040|GBGT1'] 137712 7992 YELLNCDKHKS True NCI_RA007_Epitope_Rep1 1348.6445357988798 1348.64342993586 35.079 2 -0.5423863647035783 0.15771556405725679 0.970009771490877 ['ENSG00000126749|ENST00000599672|EMG1'] 46881 23531 ITLHERLRGL True PC9_epitope_Rep1 1206.71968977482 1206.7180349037899 95.301 3 -0.5424948791957825 0.15774287150059169 0.9700595232010033 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 58701 11395 LERRELDP True PC9_epitope_Rep3 1026.5458077337798 1026.54470993586 48.834 2 -0.5424979791496426 0.15774287150059169 0.9700609450064733 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-2|ILDR1', 'nc|ENSG00000145103|Q86SU0-6|ILDR1', 'nc|ENSG00000145103|Q86SU0-5|ILDR1'] 46225 3053 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 16.191 2 -0.5425887263501863 0.1577701771733316 0.970102579808135 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 43323 10660 IFVWIQYEGRW True H1975_Epitope_Rep1 1495.76122023363 1495.76012993586 45.96 2 -0.542592539101062 0.1577701771733316 0.970104329658697 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 105254 23063 SRKSRVGK True PC9_epitope_Rep2 916.5566472009998 916.55554993586 94.203 2 -0.5426545164249292 0.15779748107564878 0.970132780306832 ['ENST00000395442.5_1_10:55568369-55568990:-|nuORF'] 59634 5222 LFYYRLWDLYK True NCI_RA007_Epitope_Rep1 1578.82348613702 1578.8218349037902 24.394 3 -0.5426568430225034 0.15779748107564878 0.9701338485624776 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2', 'ENST00000525110.1_1_11:45889192-45889438:+|nuORF'] 112469 13791 TLDIELQSL True PC9_epitope_Rep1 1030.55464108198 1030.55354993586 57.892 2 -0.5427688602546522 0.15784355042629752 0.97018530109829 ['CON__Q148H6'] 126413 9324 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 41.203 3 -0.542804176351121 0.15785720074560336 0.9702015308142857 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 117910 14908 TWRRSMWWRTR True H1975_Epitope_Rep1 1620.8208178817597 1620.81972993586 62.581 2 -0.5428394705342753 0.1578870591286307 0.9702177543274296 ['chr16:29454110-29454191|218|21.62|0.0|21.04|-|1|None,BOLA2-SMG1P6|1'] 131356 6813 VTGRQMRLCK True H1975_Epitope_Rep1 1190.6376170269798 1190.6365099358602 31.248 2 -0.542852662385585 0.15791435702940126 0.9702238191567288 ['ENST00000377403.6_1_1:9328830-9329223:+|nuORF'] 78778 6303 PAAPAPGED True PC9_epitope_Rep5 823.37119741675 823.37010993586 29.219 2 -0.542853091580923 0.15791435702940126 0.9702240164843081 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA', 'ENST00000263979.7_1_1:25944342-25980780:+|nuORF', 'ENSG00000117643|ENST00000374332|MAN1C1'] 67333 10543 LSSENNPLVQ True H1975_Epitope_Rep1 1099.5509526838698 1099.54984993586 45.508 2 -0.5429326335265847 0.15800904390670836 0.9702605966880457 ['ENSG00000198796|ENST00000361673|ALPK2', 'ALPK2|p.T1489Lfs*22|1|0.17|ENSG00000198796|chr18:58535722-58535722|T/-|frameshift_variant'] 59125 7859 LEYNYPGEAP True NCI_RA007_Epitope_Rep1 1151.5135045459897 1151.5124099358602 34.562 2 -0.5430671718387817 0.1581037277147488 0.9703225135587265 ['MN1|p.Q1193Rfs*19|1|0.47|ENSG00000169184|chr22:27796968-27796968|C/-|frameshift_variant', 'ENSG00000169184|ENST00000302326|MN1'] 112924 13730 TLLGLLHG True PC9_epitope_Rep4 822.4963383602201 822.49524993586 60.71 2 -0.5431502787117305 0.15811820376942648 0.9703607887797567 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2', 'nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 126412 8537 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 38.199 3 -0.5431668058276571 0.15811820376942648 0.9703684029589013 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 106990 6061 SVEMSAVAPPP True H1975_Epitope_Rep3 1083.5270464351497 1083.5259499358601 28.324 2 -0.5432744557094766 0.15811820376942648 0.9704180188044619 ['ENSG00000166664|ENST00000299847|CHRFAM7A', 'ENSG00000175344|ENST00000306901|CHRNA7', 'nc|ENSG00000175344|P36544-2|CHRNA7'] 45744 15285 ISAADKAEEF True NCI_RA007_Epitope_Rep4 1079.51350454599 1079.5124099358602 66.445 2 -0.543325857895238 0.15811820376942648 0.9704417227024922 ['nc|ENSG00000108039|Q9NQW7-2|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7-4|XPNPEP1', 'ENSG00000108039|ENST00000502935|XPNPEP1', 'ENST00000513817.5_1_10:111637546-111643934:-|nuORF', 'ENST00000472336.5_1_10:111635284-111643934:-|nuORF', 'ENST00000488118.6_1_10:111637546-111648351:-|nuORF'] 58888 10637 LETAMHVKEK True PC9_epitope_Rep2 1184.62234380232 1184.62124993586 46.228 2 -0.5433313508693877 0.15811820376942648 0.9704442562462668 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 117922 19700 TWSPIVSV True PC9_epitope_Rep2 887.47526856247 887.47416993586 81.164 2 -0.5433476665960872 0.15811820376942648 0.9704517821551556 ['ENST00000483075.1_1_7:14026292-14028664:-|nuORF'] 106297 16891 STFPQFIKA True PC9_epitope_Rep4 1037.5545815123298 1037.5534899358602 72.955 2 -0.5433711567130733 0.15811820376942648 0.9704626188168654 ['ENSG00000040487|ENST00000375153|SLC66A1'] 117801 12452 TVWNNWFYRRF True H1975_Epitope_Rep3 1587.77351625283 1587.7724099358602 53.089 2 -0.5433981809030926 0.1581318467621702 0.9704750879523764 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 106522 11360 STLPKSLSL True PC9_epitope_Rep3 944.55424715916 944.55314993586 48.701 2 -0.5434107654628066 0.15815656852100923 0.9704808953178073 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 141113 21619 YSQWGWLLP True PC9_epitope_Rep3 1148.5654805491997 1148.5643899358602 88.454 2 -0.5434297209635095 0.15815656852100923 0.9704896435869849 ['nc|ENSG00000164458|O15178|TBXT'] 131780 19108 VTPTPAKRRKV True NCI_RA007_Epitope_Rep4 1251.7775390041102 1251.77644993586 82.646 2 -0.5434569363877337 0.15815656852100923 0.9705022058803366 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 42886 6902 IERANSVTWNP True NCI_RA007_Epitope_Rep2 1285.64149902377 1285.6404099358601 31.466 2 -0.5434646117672003 0.1581676470111646 0.9705057491503694 ['ENSG00000128683|ENST00000358196|GAD1', 'ENST00000488724.5_1_2:171705783-171716389:+|nuORF'] 33959 5376 GLSLEQVKK True NCI_RA007_Epitope_Rep5 1000.5916952970399 1000.59058993586 27.368 2 -0.5434707443989147 0.1581676470111646 0.9705085803551913 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ATP2A2|p.K543Dfs*10|1|0.15|ENSG00000174437|chr12:110339585-110339586|AG/-|frameshift_variant', 'ATP2A2-IFT81|3|fusion', 'ATP2A2-IFT81|2|fusion', 'ATP2A2-IFT81|1|fusion'] 43006 11851 IETEGEKQELW True PC9_epitope_Rep5 1360.6510606479596 1360.64941490379 50.583 3 -0.5435556398998401 0.15821369543377517 0.970547785306452 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 126417 8261 VLKKKKKKKK True PC9_epitope_Rep4 1254.92274668582 1254.9211049037901 39.237 3 -0.5436208231511316 0.1582870197838521 0.9705779021469936 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 125174 6596 VIHIHSETSVP True H1975_Epitope_Rep1 1217.64043639461 1217.6393299358601 30.432 2 -0.5436519782784397 0.1582870197838521 0.9705923014728319 ['ENST00000413189.1_1_1:25451546-25451861:-|nuORF'] 63657 21532 LMRFRKPWPLR True NCI_RA007_Epitope_Rep4 1498.8707281962998 1498.86907490379 93.349 3 -0.5436525563246223 0.1582870197838521 0.9705925686633268 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 141786 6028 YVDAWSSNF True PC9_epitope_Rep5 1087.46107505031 1087.45996993586 28.179 2 -0.5437704331271228 0.15831686055931818 0.9706470763534789 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 126388 4861 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 26.106 3 -0.5438159028474505 0.15833049790178066 0.9706681135185715 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 66982 7601 LSPEYQLP True NCI_RA007_Epitope_Rep1 945.4807478657299 945.47964993586 33.559 2 -0.5438495703971161 0.15834156932000454 0.9706836943419568 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF', 'TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 139621 21364 YLYYFKSP True PC9_epitope_Rep1 1079.5327834385898 1079.5316899358602 87.008 2 -0.5438610569512369 0.15834156932000454 0.9706890109378037 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B'] 119153 11344 VAILTEAI True PC9_epitope_Rep2 828.49566965388 828.49456993586 48.955 2 -0.543876986187234 0.15835520559930008 0.9706963845157593 ['nc|ENSG00000131059|Q9BQP9-2|BPIFA3', 'ENSG00000131059|ENST00000375454|BPIFA3'] 139465 5083 YLQQFLRRYCL True NCI_RA007_Epitope_Rep5 1501.7863894356499 1501.78417987172 26.251 4 -0.5438959276607792 0.15836884143674157 0.9707051534587842 ['ENST00000488971.1_1_2:86683605-86693535:+|nuORF', 'ENST00000409556.5_1_2:86684189-86693535:+|nuORF'] 2878 12299 AEVIVDWRP True NCI_RA007_Epitope_Rep4 1083.57129420563 1083.57018993586 54.305 2 -0.5439132618096784 0.15838247683235046 0.9707131792557823 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15', 'ENST00000546932.5_1_12:72265915-72278641:+|nuORF'] 80244 11940 PGASEELMPL True H1975_Epitope_Rep1 1042.50049733414 1042.49997496793 50.931 1 -0.54396715812846 0.15842338036839632 0.9707381394017668 ['ENSG00000185294|ENST00000329196|SPPL2C'] 39620 18994 HLLVLKMIFM True H1975_Epitope_Rep2 1243.71849311663 1243.7168549037901 78.843 3 -0.5440133014163019 0.15842338036839632 0.9707595160801403 ['ENSG00000187510|ENST00000344636|PLEKHG7'] 113455 11640 TLSRERPLP True PC9_epitope_Rep2 1067.60874234351 1067.60764993586 50.099 2 -0.544032716812267 0.15842338036839632 0.9707685125477552 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19757012-19757291:-|nuORF'] 71233 22601 LYPGIVTFVI True PC9_epitope_Rep4 1120.65323292444 1120.65267496793 95.165 1 -0.5441390839222066 0.15846684702489916 0.9708178201019729 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1'] 21010 3448 EQRWHMKRWE True NCI_RA007_Epitope_Rep1 1484.7095360972796 1484.70790490379 17.312 3 -0.5442103007429544 0.15846684702489916 0.9708508527177298 ['F5|p.R345W|1|0.11|ENSG00000198734|chr1:169555267-169555267|G/A|missense_variant'] 33752 18308 GLKIGDTV True PC9_epitope_Rep1 801.45961849833 801.45852993586 75.21 2 -0.5442376177443659 0.1584864094340234 0.9708635273195563 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 134334 20897 VYPASKMFPFI True PC9_epitope_Rep4 1298.67331674602 1298.67220993586 88.539 2 -0.5442648956790715 0.1584864094340234 0.9708761860690621 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 137758 18179 YENLKWTLERK True PC9_epitope_Rep6 1478.7881632574597 1478.78706993586 82.566 2 -0.5442684766407738 0.1584864094340234 0.9708778480386824 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57', 'CCDC57|p.E177Sfs*20|1|0.5|ENSG00000176155|chr17:82195352-82195352|C/-|frameshift_variant'] 114652 19517 TQEGNKFTV True PC9_epitope_Rep3 1022.5032742154599 1022.50216993586 80.304 2 -0.544298427738736 0.1584864094340234 0.9708917502549035 ['ENSG00000145384|ENST00000274024|FABP2'] 126180 21619 VLFPSTCPVL True PC9_epitope_Rep5 1074.5783537320199 1074.5772499358602 88.198 2 -0.5443274942484144 0.1584864094340234 0.9709052444947509 ['ENST00000278951.11_3_11:117066719-117067788:+|nuORF'] 16985 9750 EFYRDKKY True H1975_Epitope_Rep3 1147.5662088251897 1147.5651099358602 42.527 2 -0.5443589082447415 0.15850004049566696 0.9709198314624065 ['nc|ENSG00000083454|Q93086|P2RX5', 'ENST00000549063.1_1_17:3579619-3585278:-|nuORF', 'nc|ENSG00000083454|Q93086-2|P2RX5', 'nc|ENSG00000083454|Q93086-5|P2RX5', 'nc|ENSG00000083454|Q93086-1|P2RX5', 'ENSG00000083454|ENST00000225328|P2RX5', 'nc|ENSG00000083454|Q93086-4|P2RX5'] 44776 22987 IMESIWETESL True PC9_epitope_Rep1 1336.6220690188 1336.62096993586 93.216 2 -0.5443807308367604 0.15851367111571854 0.9709299664700921 ['ENSG00000105851|ENST00000496166|PIK3CG'] 11223 9136 DEDNRRWMREN True NCI_RA007_Epitope_Rep5 1519.6586227232299 1519.65752993586 41.791 2 -0.5444530003094346 0.15857589452030388 0.970963540750806 ['nc|ENSG00000185437|P55822|SH3BGR', 'ENSG00000185437|ENST00000333634|SH3BGR'] 19801 12822 ELSLRWHL True PC9_epitope_Rep6 1052.57671393924 1052.57560993586 60.821 2 -0.5444713006068982 0.15858695476117204 0.9709720450581911 ['ENST00000446716.5_1_2:220075515-220081188:-|nuORF', 'nc|ENSG00000115657|Q9NP58-4|ABCB6', 'ENSG00000115657|ENST00000265316|ABCB6'] 8832 7257 AVEFQVMTQTQ True NCI_RA007_Epitope_Rep1 1280.607087661 1280.60545490379 32.218 3 -0.5444769435317242 0.15858695476117204 0.9709746675801928 ['nc|ENSG00000139192|Q9BX59-3|TAPBPL', 'ENST00000539384.5_1_12:6560901-6571312:+|nuORF', 'ENSG00000139192|ENST00000266556|TAPBPL', 'nc|ENSG00000139192|Q9BX59-2|TAPBPL', 'nc|ENSG00000139192|Q9BX59-7|TAPBPL', 'ENST00000545700.5_1_12:6562264-6567817:+|nuORF', 'nc|ENSG00000139192|Q9BX59-4|TAPBPL', 'nc|ENSG00000139192|Q9BX59-6|TAPBPL'] 117306 13176 TVMNPYMKLAP True H1975_Epitope_Rep2 1263.63555133831 1263.6344499358602 55.806 2 -0.5445186491903721 0.1586065042757191 0.970994053089736 ['ENSG00000084674|ENST00000233242|APOB'] 91782 23683 RKGKKKKRWH True NCI_RA007_Epitope_Rep4 1350.8472903297798 1350.8461899358601 102.71 2 -0.5445292368961031 0.1586065042757191 0.9709989752807783 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 63897 13536 LNPLGRAVL True PC9_epitope_Rep6 951.5865503469499 951.5860049679301 63.799 1 -0.5445292936577355 0.1586065042757191 0.9709990016700019 ['ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 40593 8456 HRHRHHYHLRR True NCI_RA007_Epitope_Rep1 1603.85696058003 1603.85586993586 36.891 2 -0.544531892304285 0.1586065042757191 0.9710002098251951 ['FASLG|p.D16Afs*56|1|0.17|ENSG00000117560|chr1:172659248-172659248|A/-|frameshift_variant'] 78945 7185 PAGVQELT True PC9_epitope_Rep4 813.42323298961 813.42212993586 34.938 2 -0.5445682780133235 0.1586065042757191 0.9710171283215011 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENST00000310331.2_1_5:139927339-139928819:+|nuORF'] 26954 19251 FLDSYKLVI True PC9_epitope_Rep2 1096.61684741572 1096.61574993586 79.422 2 -0.5446005764366693 0.15863632682808324 0.9710321497009222 ['ENSG00000186230|ENST00000334181|ZNF749'] 55369 4889 LAEPM[Oxidation]TYKLM[Oxidation] True H1975_Epitope_Rep3 1227.58793320043 1227.5868299358601 23.933 2 -0.5446816551179096 0.15868234379554952 0.9710698718212674 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 116704 17322 TVDEDEEVDPA True H1975_Epitope_Rep2 1217.49355694705 1217.49190490379 71.922 3 -0.5447454813857097 0.15869596903493288 0.9710995812513743 ['ENSG00000148843|ENST00000369797|PDCD11', 'PDCD11|p.Q1325Sfs*3|1|0.06|ENSG00000148843|chr10:103438751-103438751|A/-|frameshift_variant'] 15665 8844 EATLSWQQTCP True PC9_epitope_Rep1 1262.56013746858 1262.55904993586 38.86 2 -0.5447604744195101 0.15870959383299865 0.9711065619041211 ['nc|ENSG00000121270|Q96J66-2|ABCC11', 'ENSG00000121270|ENST00000356608|ABCC11', 'ABCC11|p.N500Kfs*8|1|0.19|ENSG00000121270|chr16:48211056-48211056|G/-|frameshift_variant', 'ENST00000567385.5_1_16:48244807-48265838:-|nuORF', 'ABCC11|p.L661Cfs*29|1|0.31|ENSG00000121270|chr16:48200377-48200377|G/-|frameshift_variant'] 132037 13550 VTSWNWVL True PC9_epitope_Rep6 1003.5127167003499 1003.51160993586 63.851 2 -0.5448383499398661 0.15875560737825714 0.9711428311815646 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.P172Tfs*35|1|0.24|ENSG00000196455|chr3:130744687-130744705|CTTCTGGAAGATAAGTGGG/-|frameshift_variant'] 61190 14258 LILFMFRR True H1975_Epitope_Rep3 1094.6422914012599 1094.6411899358602 60.185 2 -0.5448513475551553 0.15876408861251456 0.971148886404447 ['PNPLA7|p.A228Lfs*27|1|0.31|ENSG00000130653|chr9:137522845-137522849|GTGCA/-|frameshift_variant', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 116817 11222 TVEGLGLA True H1975_Epitope_Rep2 758.41741933318 758.4168749679301 48.208 1 -0.544859898992362 0.15876408861251456 0.9711528705575913 ['ENST00000469931.2_1_1:153606696-153606801:-|nuORF'] 132398 22022 VVAGRRKS True PC9_epitope_Rep1 871.53518348043 871.53408993586 89.526 2 -0.5448760779886352 0.15876408861251456 0.9711604090314642 ['ENSG00000151952|ENST00000422113|TMEM132D'] 70415 6629 LVTTGVLK True NCI_RA007_Epitope_Rep5 829.52730413533 829.52620993586 32.163 2 -0.5449074182080887 0.15877771120431397 0.9711750140132245 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 105479 9994 SRWRERWCRVK True NCI_RA007_Epitope_Rep1 1560.8208178817597 1560.8191649037901 42.88 3 -0.5449625644130645 0.15878876204355924 0.9712007201441057 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1'] 66772 11143 LSLPYYHAAL True PC9_epitope_Rep2 1146.60734536118 1146.6062499358602 48.189 2 -0.5449806828865345 0.15878876204355924 0.9712091679913387 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF', 'ENST00000545307.6_1_14:58666901-58669614:+|nuORF'] 39666 7511 HLQMRLWTWDF True PC9_epitope_Rep5 1531.73943924323 1531.73779490379 33.842 3 -0.5450337453288601 0.15879724084329155 0.9712339143916648 ['nc|ENSG00000122420|P43088-5|PTGFR'] 110234 4548 TEQYIQTMTWL True H1975_Epitope_Rep3 1412.66460253712 1412.66296490379 22.614 3 -0.5450843415567059 0.15879724084329155 0.9712575185743605 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 101252 13024 SLHTTTNV True PC9_epitope_Rep3 871.4399456829101 871.43884993586 55.125 2 -0.5451037770800246 0.15879724084329155 0.9712665877048209 ['nc|ENSG00000127124|Q5T1R4-2|HIVEP3', 'ENSG00000127124|ENST00000372583|HIVEP3'] 58287 9359 LELVEKLYP True H1975_Epitope_Rep3 1102.6274120994199 1102.62630993586 40.999 2 -0.5451241927882332 0.1588082901554404 0.9712761154455127 ['RUFY2|p.G203Efs*4|1|0.15|ENSG00000204130|chr10:68394347-68394347|C/-|frameshift_variant', 'ENST00000472394.2_1_10:70143908-70166946:-|nuORF', 'nc|ENSG00000204130|Q8WXA3-5|RUFY2', 'nc|ENSG00000204130|Q8WXA3-4|RUFY2', 'ENSG00000204130|ENST00000602465|RUFY2', 'nc|ENSG00000204130|Q8WXA3-3|RUFY2', 'nc|ENSG00000204130|Q8WXA3-1|RUFY2'] 81965 17044 PLTLSPAAPA True PC9_epitope_Rep1 936.5280324113198 936.52692993586 70.385 2 -0.5451474199228743 0.1588082901554404 0.9712869567738153 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 39922 10147 HPGVITMAA True PC9_epitope_Rep4 895.4585729525099 895.45746993586 46.707 2 -0.5452793310891173 0.1588627679554433 0.9713485575790832 ['PSKH2|p.W319G|1|0.11|ENSG00000147613|chr8:86048665-86048665|A/C|missense_variant'] 127973 9260 VPHLLTEA True PC9_epitope_Rep4 878.48616759934 878.48506993586 43.217 2 -0.5452841682253033 0.1588627679554433 0.9713508174574655 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 67842 20341 LTALPRHGRI True PC9_epitope_Rep5 1132.68291034328 1132.6818099358602 83.277 2 -0.5452904197216097 0.1588627679554433 0.9713537382202226 ['ENSG00000183090|ENST00000329798|FREM3'] 55197 17041 LACEKECLPR True PC9_epitope_Rep1 1160.56820005448 1160.5671099358601 70.374 2 -0.5453228104663567 0.1588627679554433 0.9713688733940891 ['ENSG00000162591|ENST00000356575|MEGF6'] 114085 3720 TPFQGQGHGA True PC9_epitope_Rep4 998.4569927293797 998.45588993586 20.447 2 -0.5453611178387032 0.15890362167500446 0.9713867773053688 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1', 'HAT1-EXOC6B|1|fusion'] 38332 4472 HEHTRDDRDRY True NCI_RA007_Epitope_Rep1 1498.6661506318198 1498.66450490379 21.502 3 -0.5453856323149593 0.15890362167500446 0.9713982370821366 ['ASTL|p.A197D|1|0.09|ENSG00000188886|chr2:96132587-96132587|G/T|missense_variant'] 17211 12508 EGVATVGLV True PC9_epitope_Rep3 843.4701831820298 843.46963496793 53.137 1 -0.5453879545174767 0.15890362167500446 0.9713993227355476 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant'] 67079 10539 LSQEKTTL True PC9_epitope_Rep1 918.5022115863 918.50110993586 45.429 2 -0.5454374615844229 0.15890952064884817 0.9714224716610155 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 57564 6675 LEDSLQAQ True H1975_Epitope_Rep2 902.4345259493 902.43342993586 30.585 2 -0.5454896621070783 0.15890952064884817 0.9714468880102172 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 132397 16951 VVAGRRKS True H1975_Epitope_Rep2 871.53518348043 871.53408993586 70.448 2 -0.5454919569571214 0.15890952064884817 0.9714479615950056 ['ENSG00000151952|ENST00000422113|TMEM132D'] 46231 3472 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 18.244 2 -0.5455076283270363 0.15890952064884817 0.971455293453913 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 24742 20328 FAQRSLRRRQ True H1975_Epitope_Rep2 1316.7537838677597 1316.75212490379 84.237 3 -0.5455439310472855 0.15891799138796256 0.9714722805401622 ['nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4', 'nc|ENSG00000037280|P35916-3|FLT4', 'ENST00000507059.5_1_5:180043993-180056331:-|nuORF'] 60547 20543 LHDSYYDTW True PC9_epitope_Rep5 1198.49310345458 1198.49200993586 84.063 2 -0.5455444513357801 0.15891799138796256 0.9714725240269239 ['ENST00000407479.5_1_16:3713563-3713731:+|nuORF'] 114677 7792 TQFHTELMAQA True H1975_Epitope_Rep1 1275.59177195003 1275.5906699358602 34.927 2 -0.5455727554755452 0.15891799138796256 0.9714857711422994 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1'] 126219 7042 VLGKVVGL True NCI_RA007_Epitope_Rep4 783.5218248320699 783.52072993586 33.713 2 -0.5455936986830087 0.15893160663698908 0.9714955746898851 ['ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 142095 18517 YVPCEPQGL True PC9_epitope_Rep4 1004.4637179025999 1004.46262993586 79.299 2 -0.545598291102196 0.15894522144522144 0.9714977245846568 ['CON__Q9NSB4', 'ENSG00000161850|ENST00000257974|KRT82'] 30085 9580 FYIYRLYWWEF True NCI_RA007_Epitope_Rep1 1684.8078360728798 1684.80619490379 41.262 3 -0.5456786043344575 0.15897502306683717 0.971535332662185 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 31810 13366 GEIIEKIRIGH True NCI_RA007_Epitope_Rep2 1263.72992010535 1263.7288299358602 56.63 2 -0.5456969750864646 0.15898863673152255 0.9715439378117061 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF', 'nc|ENSG00000167210|Q8IVV2-3|LOXHD1'] 66903 16424 LSNLSSTSHVP True PC9_epitope_Rep1 1140.5775017848803 1140.57640993586 67.998 2 -0.5457687776911672 0.1590346234157238 0.9715775810016426 ['ENSG00000169710|ENST00000306749|FASN'] 17074 12406 EGIIHSLVLRN True NCI_RA007_Epitope_Rep1 1249.7142700412098 1249.7131699358602 52.231 2 -0.5459007713723462 0.15904308698326372 0.9716394671319588 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000462914.3_1_8:21957359-21958496:+|nuORF', 'ENST00000491733.2_1_8:21958038-21958496:+|nuORF'] 62481 15391 LLIETNNVG True PC9_epitope_Rep3 971.52876068731 971.52766993586 64.356 2 -0.5459150313382869 0.15904308698326372 0.9716461561387831 ['ENST00000475639.5_1_21:44521392-44521665:-|nuORF'] 96584 19077 SAFNPEHLSY True PC9_epitope_Rep2 1163.52473793603 1163.52364993586 78.745 2 -0.545925046256961 0.15904308698326372 0.9716508542601934 ['SMURF2|p.V475F|1|0.11|ENSG00000108854|chr17:64557616-64557616|C/A|missense_variant'] 78706 5316 PAAAAAAPAA True PC9_epitope_Rep5 780.4130026590799 780.41190993586 25.461 2 -0.5459604384362006 0.1590728841267015 0.9716674595725902 ['ENST00000595775.5_1_19:42817488-42818494:+|nuORF'] 68791 8918 LTLLSEQAP True H1975_Epitope_Rep2 970.53351171458 970.53240993586 39.265 2 -0.5460501385985622 0.15916742198627476 0.9717095619114026 ['ENSG00000242173|ENST00000219409|ARHGDIG'] 126396 4034 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 21.775 3 -0.5461243986959746 0.15922958646920773 0.9717444353960111 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 89339 21729 QWQRYQHQWQR True PC9_epitope_Rep4 1642.78654054802 1642.78544993586 91.774 2 -0.5461702835969371 0.15924061695825983 0.9717659917752586 ['ENST00000577066.2_1_17:79004653-79005004:-|nuORF'] 87123 8188 QNVVVTEAVKE True H1975_Epitope_Rep3 1214.65066672514 1214.6495699358602 36.475 2 -0.5461734782607647 0.15924061695825983 0.9717674928388063 ['nc|ENSG00000154645|Q9H9P2-3|CHODL'] 112010 12554 TIRTTKWEL True PC9_epitope_Rep4 1146.6397081186199 1146.63805490379 56.111 3 -0.5462602148190121 0.15928659286592867 0.9718082590677822 ['ENSG00000154237|ENST00000388948|LRRK1'] 45919 14714 ISEELQDAL True PC9_epitope_Rep4 1016.5026055091199 1016.50150993586 64.531 2 -0.5462958759292207 0.1593060702668587 0.9718250263468271 ['ENSG00000033030|ENST00000633063|ZCCHC8', 'nc|ENSG00000033030|Q6NZY4-2|ZCCHC8'] 128653 11818 VPVHDIYVSQ True PC9_epitope_Rep5 1155.59242357303 1155.5913299358601 50.454 2 -0.5463133750604237 0.1593060702668587 0.9718332555502537 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 42693 8181 IEKDYIDYIQ True PC9_epitope_Rep4 1298.6394333351 1298.63779490379 38.928 3 -0.5463147529788542 0.1593060702668587 0.9718339035740429 ['ENSG00000170464|ENST00000302060|DNAJC18'] 98852 8018 SGTSDPYVKI True H1975_Epitope_Rep3 1065.5342399905699 1065.5331499358601 35.814 2 -0.5463444405752657 0.1593060702668587 0.9718478667908441 ['ENSG00000170743|ENST00000318881|SYT9'] 72390 19591 MKILFNVV True PC9_epitope_Rep4 962.5623097450599 962.56120993586 83.48 2 -0.5463512660254214 0.1593060702668587 0.9718510774358476 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 97031 13379 SCQKAMFQCGL True PC9_epitope_Rep5 1214.5246209903398 1214.52298490379 56.478 3 -0.5464231492887152 0.15933327939153652 0.9718848993163534 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 102557 15316 SLVTRGTR True PC9_epitope_Rep1 888.51411368268 888.5130099358599 63.733 2 -0.5464935558305335 0.15933327939153652 0.9719180414157875 ['ENST00000329875.12_1_17:79890966-79891083:-|nuORF'] 45315 3058 IPYWRTDNNKN True NCI_RA007_Epitope_Rep2 1419.6895118453497 1419.68785490379 16.497 3 -0.5466637951670673 0.1594012944983819 0.971998238817258 ['ENSG00000204022|ENST00000371939|LIPJ'] 3807 16985 AGVEFEEKF True PC9_epitope_Rep2 1054.49712620586 1054.4960299358602 70.58 2 -0.546690498440395 0.1594012944983819 0.9720108262673749 ['ENSG00000244067|ENST00000493422|GSTA2', 'ENSG00000243955|ENST00000334575|GSTA1', 'ENSG00000174156|ENST00000211122|GSTA3'] 129206 11608 VQTAVKNLA True PC9_epitope_Rep5 942.5498304850599 942.54872993586 49.647 2 -0.5467470605265197 0.1594012944983819 0.9720374957196994 ['ENSG00000164440|ENST00000358430|TXLNB'] 84665 6671 QDIIDFLMET True NCI_RA007_Epitope_Rep2 1223.57439055039 1223.5732899358602 30.56 2 -0.5468698244483148 0.1594012944983819 0.9720954129876662 ['ENSG00000147459|ENST00000276440|DOCK5', 'ENST00000481728.2_1_8:25209198-25222229:+|nuORF', 'ENST00000467709.6_1_8:25191660-25227073:+|nuORF'] 98296 8550 SEVPRVRVPP True H1975_Epitope_Rep3 1134.6509415086598 1134.6498499358602 37.877 2 -0.5468744735730129 0.1594012944983819 0.972097607233018 ['ENSG00000229924|ENST00000512047|FAM90A26'] 7070 14840 AQRPRRLPAGP True PC9_epitope_Rep1 1217.7105220734497 1217.70942993586 61.902 2 -0.5469037290442572 0.15941489619909063 0.9721114164202017 ['nc|ENSG00000125861|Q9GZZ7|GFRA4'] 41796 6566 IASIYTDRRE True NCI_RA007_Epitope_Rep5 1222.6305999868998 1222.6295099358601 31.919 2 -0.5469970652944901 0.1594207588382817 0.9721554903152863 ['EMP2|p.A113del|1|0.5|ENSG00000213853|chr16:10533071-10533073|GCC/-|inframe_deletion'] 12172 10193 DIERYSKRYMK True H1975_Epitope_Rep1 1487.75548323019 1487.7543899358602 44.147 2 -0.5469984747915431 0.1594207588382817 0.972156156089087 ['ENSG00000113356|ENST00000651687|POLR3G'] 24823 12992 FAVFHPHFVL True PC9_epitope_Rep4 1212.64439957624 1212.64276490379 57.866 3 -0.5470030437435504 0.1594207588382817 0.9721583142678792 ['ENSG00000147262|ENST00000682440|GPR119'] 15153 3182 EAAERVESA True H1975_Epitope_Rep3 960.4512386425998 960.4501499358599 16.846 2 -0.5470216095366189 0.1594207588382817 0.9721670846079215 ['nc|ENSG00000230487|Q96PY0|PSMG3-AS1', 'ENST00000437621.6_1_7:1626575-1627631:+|nuORF'] 99805 13443 SIKLTCTLS True PC9_epitope_Rep3 964.52631815916 964.52522993586 56.755 2 -0.5470636232586585 0.15942662071866556 0.972186935414255 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 85398 18947 QEVLGEDKLK True PC9_epitope_Rep1 1157.62920300457 1157.62810993586 77.663 2 -0.5471013280197605 0.15942662071866556 0.972204754845025 ['YARS|p.E25D|1|0.15|ENSG00000134684|chr1:32811040-32811040|C/A|missense_variant'] 3715 6595 AGSAKEDRVP True PC9_epitope_Rep2 1028.5250722891997 1028.5239699358601 30.78 2 -0.5471422463779073 0.15942662071866556 0.9722240978955728 ['nc|ENSG00000132970|Q9UPY6-2|WASF3'] 60646 13503 LHLCGPSYLI True H1975_Epitope_Rep2 1114.58450174162 1114.5834099358601 57.072 2 -0.5471451637446909 0.15942662071866556 0.9722254771953077 ['ENST00000369393.7_1_6:90408675-90408747:-|nuORF'] 100723 13570 SLDSQVPVVLR True H1975_Epitope_Rep1 1211.68738658703 1211.68628993586 57.323 2 -0.5471759925638751 0.15946999724968047 0.9722400543029399 ['COL28A1|p.P350Lfs*88|1|0.16|ENSG00000215018|chr7:7490624-7490624|G/-|frameshift_variant', 'ENST00000399429.7_1_7:7495733-7529039:-|nuORF'] 90911 6307 REYPDGTVKT True NCI_RA007_Epitope_Rep1 1164.5775017848796 1164.57640993586 28.558 2 -0.5472125189423996 0.15946999724968047 0.9722573291656115 ['ENSG00000151849|ENST00000381884|CENPJ'] 47055 18088 ITSELSTTII True PC9_epitope_Rep3 1076.59650589396 1076.59540993586 74.773 2 -0.5472988138040258 0.15951337097374338 0.9722981576716027 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF'] 65659 19850 LSANITGF True H1975_Epitope_Rep1 821.42831837005 821.4277649679301 82.604 1 -0.5473118812626638 0.15951337097374338 0.9723043422156108 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 82638 21507 PQLAKFSP True PC9_epitope_Rep3 886.4912529797799 886.49070496793 88.021 1 -0.5473237011275045 0.15952180665199947 0.9723099367459175 ['nc|ENSG00000115419|O94925-3|GLS', 'ENSG00000115419|ENST00000320717|GLS', 'ENST00000469774.1_1_2:191760380-191769916:+|nuORF'] 778 5059 AAVSGALRWSR True NCI_RA007_Epitope_Rep3 1172.64143945412 1172.63980490379 26.893 3 -0.5473738566545483 0.15952180665199947 0.9723336808625228 ['ENST00000289431.9_1_20:48525041-48531957:-|nuORF'] 86435 5750 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 30.283 3 -0.547384464847608 0.15952180665199947 0.9723387038610488 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 9537 4596 AVYFHKYVYT True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 22.706 3 -0.5474163336397925 0.1595489986735255 0.9723537958424263 ['ENST00000451442.5_3_20:24943568-24943694:-|nuORF'] 99992 13212 SIPPGPLSA True PC9_epitope_Rep1 837.45961849833 837.45852993586 55.683 2 -0.5474641690779232 0.1595489986735255 0.9723764548649256 ['ENST00000506216.5_1_4:5858033-5890143:-|nuORF'] 1412 3971 AEEFKTEEQDD True NCI_RA007_Epitope_Rep2 1339.5415697686299 1339.53991490379 20.082 3 -0.5474758849157647 0.15956001294079586 0.9723820055619952 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 7459 7569 ASAQRELAA True PC9_epitope_Rep5 915.4773938207899 915.47628993586 34.063 2 -0.5475061150086779 0.15956001294079586 0.9723963298141401 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 22988 9156 EVEWILDLK True PC9_epitope_Rep2 1143.6175756917098 1143.61594490379 40.557 3 -0.5475981576612925 0.15963831060642825 0.972439960453691 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF', 'nc|ENSG00000072121|Q68DK2-3|ZFYVE26', 'ENST00000394455.6_1_14:68196461-68236507:-|nuORF'] 56086 4687 LATPVQGLQHY True H1975_Epitope_Rep3 1225.6455217750502 1225.64386490379 23.152 3 -0.547633595061267 0.1596680793245123 0.9724567655706958 ['FNBP4|p.Q252P|1|0.83|ENSG00000109920|chr11:47751173-47751173|T/G|missense_variant'] 86855 12473 QLQQELLL True PC9_epitope_Rep6 983.5651461960299 983.56404993586 59.401 2 -0.5476527059638007 0.15966875849129844 0.9724658299222595 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000461159.6_1_7:18330122-18868840:+|nuORF', 'HDAC9|p.G781Wfs*5|1|0.15|ENSG00000048052|chr7:18829186-18829187|-/T|frameshift_variant', 'HDAC9|p.L418Yfs*29|1|0.16|ENSG00000048052|chr7:18648474-18648474|C/-|frameshift_variant', 'nc|ENSG00000048052|Q9UKV0-11|HDAC9', 'nc|ENSG00000048052|Q9UKV0-9|HDAC9', 'nc|ENSG00000048052|Q9UKV0-10|HDAC9', 'nc|ENSG00000048052|Q9UKV0-8|HDAC9', 'nc|ENSG00000048052|Q9UKV0-3|HDAC9'] 137894 11169 YEVVQYLLS True NCI_RA007_Epitope_Rep4 1112.57537652656 1112.57426993586 49.836 2 -0.5476842330294963 0.15966875849129844 0.9724807857178109 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1'] 129913 24591 VRSVIKTS True PC9_epitope_Rep4 888.53926580136 888.5387149679301 103.08 1 -0.5476886501415041 0.15966875849129844 0.9724828813466723 ['CYP4F8|p.N112K|1|0.31|ENSG00000186526|chr19:15618137-15618137|T/G|missense_variant'] 129911 25512 VRSVIKTS True PC9_epitope_Rep2 888.53926580136 888.5387149679301 103.81 1 -0.5476940110135204 0.15966875849129844 0.9724854248071758 ['CYP4F8|p.N112K|1|0.31|ENSG00000186526|chr19:15618137-15618137|T/G|missense_variant'] 26538 15128 FIHQHFVEV True PC9_epitope_Rep3 1154.5872786229402 1154.5856249037902 63.329 3 -0.5477306180468807 0.15966875849129844 0.9725027953132048 ['KLHL18|p.R216Gfs*42|1|0.27|ENSG00000114648|chr3:47333202-47333202|A/-|frameshift_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'KLHL18|p.G390Afs*24|1|0.19|ENSG00000114648|chr3:47340615-47340615|G/-|frameshift_variant', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 130781 6954 VTAFQGKG True NCI_RA007_Epitope_Rep3 806.4286527232199 806.42754993586 34.46 2 -0.5477381486316146 0.15966875849129844 0.9725063691772782 ['ENSG00000175073|ENST00000310421|VCPIP1'] 702 5902 AAVDAGMAM-[Oxidation] True NCI_RA007_Epitope_Rep5 851.35172530591 851.35062993586 29.389 2 -0.5477792898192472 0.15968234970644843 0.9725258970019611 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 92241 5850 RLKHKLVLL True PC9_epitope_Rep4 1118.7651834152598 1118.76408993586 29.372 2 -0.5477953244362874 0.15971211386058548 0.9725335092894369 ['ENST00000420737.1_1:146011237-146016889:+|nuORF'] 65155 6803 LQNVQVPPP True H1975_Epitope_Rep2 990.5498304850599 990.54872993586 31.085 2 -0.5478741088378115 0.15975805016900907 0.9725709228269115 ['ENST00000531236.1_1_11:71192815-71195619:+|nuORF'] 129912 25607 VRSVIKTS True PC9_epitope_Rep2 888.53926580136 888.5387149679301 104.18 1 -0.54792159201087 0.15983116085001778 0.9725934810034272 ['CYP4F8|p.N112K|1|0.31|ENSG00000186526|chr19:15618137-15618137|T/G|missense_variant'] 86721 16466 QLKQQIQSI True PC9_epitope_Rep2 1084.62405805448 1084.62296993586 68.577 2 -0.5479340505929235 0.15983116085001778 0.9725994009298328 ['ENSG00000100138|ENST00000401959|SNU13'] 34611 19500 GPWCLLSL True PC9_epitope_Rep2 887.4575103233499 887.45640993586 80.389 2 -0.5479378520409691 0.15983116085001778 0.9726012073525434 ['ENST00000306384.4_1_2:85820230-85820377:+|nuORF'] 68429 7245 LTEVKDELEP True NCI_RA007_Epitope_Rep1 1171.5972341699498 1171.59612993586 32.173 2 -0.5479645190226912 0.15984474811999677 0.9726138805617479 ['ENSG00000132467|ENST00000254803|UTP3'] 78944 8092 PAGVQELT True PC9_epitope_Rep1 813.42323298961 813.42212993586 35.951 2 -0.5480378387705006 0.15985833495051427 0.9726487361899652 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENST00000310331.2_1_5:139927339-139928819:+|nuORF'] 88776 8711 QTQQEEREVAL True H1975_Epitope_Rep1 1329.65245763029 1329.6513699358602 38.433 2 -0.5480816212353579 0.1599178498657783 0.972669557843749 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 80237 11591 PGAPGGLFP True PC9_epitope_Rep1 811.42283906679 811.42174993586 49.461 2 -0.5481018159174176 0.1599178498657783 0.9726791638117029 ['DAAM1|p.P539L|1|0.14|ENSG00000100592|chr14:59331264-59331264|C/T|missense_variant'] 24332 15801 EYVRALHEL True PC9_epitope_Rep3 1128.5927579262 1128.5916699358602 65.933 2 -0.5481933041384596 0.1599476058797846 0.9727226974406163 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 70186 14482 LVQAFQFTDK True PC9_epitope_Rep6 1195.62372370131 1195.62262993586 67.588 2 -0.548238301010184 0.159993531694696 0.9727441180664683 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 138690 21745 YILVIYIFKTK True PC9_epitope_Rep6 1399.8479099797098 1399.84627490379 96.535 3 -0.5483154429007667 0.16003945602432043 0.9727808556273869 ['ENST00000265404.6_1_4:68472071-68472191:+|nuORF'] 129910 25697 VRSVIKTS True PC9_epitope_Rep1 888.53926580136 888.5387149679301 103.88 1 -0.5484056415722497 0.1600692086284402 0.9728238343430741 ['CYP4F8|p.N112K|1|0.31|ENSG00000186526|chr19:15618137-15618137|T/G|missense_variant'] 37213 13350 GVREMREAFTV True PC9_epitope_Rep1 1293.6499555324897 1293.64831490379 56.21 3 -0.5484365745548623 0.16007243681989425 0.9728385793154514 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 12500 3638 DKEQKQTNTDK True NCI_RA007_Epitope_Rep2 1333.6473722498497 1333.6462699358601 18.802 2 -0.54844510754071 0.16007243681989425 0.9728426472899424 ['THRAP3|p.T757Rfs*5|1|0.18|ENSG00000054118|chr1:36296736-36296737|AC/-|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 30411 7065 GAENPRPFSP True NCI_RA007_Epitope_Rep1 1070.5145076055 1070.5134099358602 31.476 2 -0.5484865358510546 0.16007243681989425 0.972862400791408 ['ENSG00000171992|ENST00000307662|SYNPO'] 70726 19813 LWRRECRREDR True H1975_Epitope_Rep1 1573.8008107131698 1573.7997099358602 82.452 2 -0.5484884607315184 0.16007243681989425 0.972863318724636 ['ENST00000303538.12_1_4:39929740-39979529:-|nuORF'] 105990 15416 SSTWLIVFY True H1975_Epitope_Rep1 1114.5698972233 1114.5688099358601 64.567 2 -0.5484936626234526 0.16007243681989425 0.9728657994494547 ['TAS2R60|p.S115I|1|0.15|ENSG00000185899|chr7:143443796-143443796|G/T|missense_variant'] 101653 9469 SLLSYEFRGP True NCI_RA007_Epitope_Rep5 1167.59242357303 1167.5913299358601 43.057 2 -0.548547797548053 0.16011317704122877 0.972891620717411 ['ENST00000578660.1_1_17:46124592-46124850:-|nuORF'] 77779 11396 NTRWRGRRRKR True NCI_RA007_Epitope_Rep2 1540.9035764192797 1540.9024699358602 48.918 2 -0.5485651463624297 0.16011317704122877 0.972899897652275 ['ENST00000238714.7_1_2:60983533-60983617:+|nuORF'] 127175 9022 VLVEDNPP True H1975_Epitope_Rep2 881.4494477374499 881.44834993586 39.656 2 -0.54861230680958 0.16011317704122877 0.9729224020630806 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|163|3|sense'] 126393 6939 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 34.401 3 -0.5486445895853603 0.1601429241241047 0.9729378109561595 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 114905 20690 TQSKPYWTIL True PC9_epitope_Rep4 1235.65502382959 1235.65392993586 87.744 2 -0.5486608298024035 0.1601565026191554 0.9729455637834152 ['ENST00000559471.5_1_15:49327615-49327825:-|nuORF'] 16157 6492 EEDIEKHPELK True NCI_RA007_Epitope_Rep1 1365.6776097489699 1365.6759749037901 29.271 3 -0.5486870092831132 0.16016749118892876 0.9729580631642915 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D'] 131970 7921 VTSEALKDPD True H1975_Epitope_Rep1 1073.52406922969 1073.5229699358601 35.419 2 -0.5487459241222602 0.16016749118892876 0.9729861997199972 ['ENSG00000183617|ENST00000330133|MRPL54'] 107691 13839 SVRREVWKL True PC9_epitope_Rep6 1171.6825759901099 1171.68094490379 65.041 3 -0.5487731501542603 0.16017847904811175 0.9729992059317687 ['ENST00000454495.6_1_3:183353505-183368101:+|nuORF'] 35929 6049 GTSPVFLVSP True H1975_Epitope_Rep2 1002.5385970950199 1002.53750993586 28.245 2 -0.5487881506667177 0.16017847904811175 0.973006372834539 ['ENSG00000170122|ENST00000382500|FOXD4'] 126738 24645 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 106.58 3 -0.5488088088297751 0.16018946619677327 0.9730162439651763 ['ENSG00000150990|ENST00000308736|DHX37'] 66562 21409 LSIEQLTTL True PC9_epitope_Rep4 1016.5753765265599 1016.5748749679301 90.523 1 -0.5488130877249671 0.16018946619677327 0.9730182887219815 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 48537 6784 KALKETRRNL True NCI_RA007_Epitope_Rep2 1227.7411534953899 1227.73951490379 31.005 3 -0.5488364884962578 0.16020304240288397 0.9730294722500474 ['ENST00000571995.5_1_17:80615490-80615769:-|nuORF'] 46230 3399 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 17.907 2 -0.5489339641523756 0.16023278370514063 0.9730760752231907 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 108934 5220 TADNVSSSTP True NCI_RA007_Epitope_Rep5 977.4301688448501 977.42906993586 26.774 2 -0.5490130278144022 0.1602657356221511 0.9731138969151181 ['ENSG00000077157|ENST00000608999|PPP1R12B', 'nc|ENSG00000077157|O60237-6|PPP1R12B'] 72538 19261 MLKRQRSL True PC9_epitope_Rep5 1030.6069685216999 1030.60586993586 79.128 2 -0.5490600466103325 0.1602657356221511 0.9731363984254676 ['ENSG00000107968|ENST00000263056|MAP3K8', 'nc|ENSG00000107968|P41279-2|MAP3K8'] 46462 9157 ISTWKAPGMD True NCI_RA007_Epitope_Rep2 1104.52738078832 1104.5262899358602 40.225 2 -0.5490919679982076 0.1602657356221511 0.9731516787378519 ['ENST00000223357.7_1_7:44153920-44154019:+|nuORF'] 132441 18735 VVAVRHLGRWC True NCI_RA007_Epitope_Rep3 1294.7080795452998 1294.70698993586 81.924 2 -0.5491084887323 0.1602657356221511 0.9731595882100295 ['ENST00000549824.1_1_12:53142751-53143132:+|nuORF'] 58067 5750 LEIPDPDK True NCI_RA007_Epitope_Rep2 925.47566248529 925.47456993586 26.983 2 -0.5491129147059326 0.1602657356221511 0.9731617073334778 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 42280 10272 IDTVIAHLNS True H1975_Epitope_Rep3 1081.5767735088898 1081.57566993586 44.562 2 -0.5491204371572985 0.1602657356221511 0.9731653091660566 ['ENST00000433480.2_1_13:48876566-48877550:-|nuORF'] 17743 4537 EHRGPVQVT True PC9_epitope_Rep6 1021.53049202281 1021.52938993586 24.702 2 -0.5491695451584069 0.16027930883993083 0.9731888269037271 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 67047 20195 LSPVLTEPHL True PC9_epitope_Rep5 1104.6179100448799 1104.6168099358601 82.726 2 -0.5492099735261228 0.1602877000161629 0.9732081935600295 ['ENSG00000108950|ENST00000592554|FAM20A', 'ENST00000226094.9_1_17:66533620-66538255:-|nuORF'] 87599 6730 QQMQEAEL True PC9_epitope_Rep5 975.4331460503098 975.43204993586 30.859 2 -0.5492255307904826 0.1602877000161629 0.9732156473977672 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES'] 84121 11531 PWWDDWER True PC9_epitope_Rep5 1188.4988575413597 1188.4972049037901 49.35 3 -0.5492443476814493 0.1602877000161629 0.97322466399414 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 99610 13736 SIFEVHSWIWR True NCI_RA007_Epitope_Rep1 1458.7408191422198 1458.7397299358602 57.445 2 -0.5492627857944762 0.16029868114817689 0.9732335001490643 ['ENST00000518942.1_1_8:52811934-52812075:+|nuORF'] 114431 11487 TPTVQPGL True PC9_epitope_Rep1 811.4439684341899 811.44286993586 49.065 2 -0.5492719993824436 0.16029868114817689 0.9732379159989227 ['ENST00000455127.6_2_17:79780443-79780851:-|nuORF'] 23150 15980 EVKSWSLGV True PC9_epitope_Rep3 1003.5338460677499 1003.53274993586 66.613 2 -0.549328176580293 0.1603122525172531 0.9732648460406583 ['RFPL4B|p.F221Lfs*39|1|0.22|ENSG00000251258|chr6:112350366-112350366|T/-|frameshift_variant', 'ENSG00000251258|ENST00000441065|RFPL4B'] 91398 12925 RHHRRRPRHPE True NCI_RA007_Epitope_Rep5 1532.8409761627197 1532.8393349037901 56.398 3 -0.5493626266747274 0.16032064128256512 0.9732813654346835 ['ENST00000373109.6_1_10:73819178-73819268:-|nuORF'] 102636 8910 SLWRSKSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 39.111 2 -0.5494257889489459 0.16032064128256512 0.9733116623205625 ['ENSG00000182827|ENST00000366812|ACBD3'] 69379 12430 LTVVSPKMVLY True H1975_Epitope_Rep3 1248.715181558 1248.71408993586 53.002 2 -0.5494293028664026 0.16032064128256512 0.9733133481943491 ['ENST00000427960.5_1_2:190332199-190332286:+|nuORF'] 107700 5073 SVRTASPDP True H1975_Epitope_Rep2 928.4614094034798 928.46030993586 24.595 2 -0.5494553916922077 0.16033421141942886 0.9733258660359371 ['ENSG00000173402|ENST00000308775|DAG1'] 138324 16468 YHDPMLKLSI True PC9_epitope_Rep4 1215.63218021003 1215.63052490379 71.313 3 -0.5496173451804459 0.16042858528071366 0.9734036210451837 ['ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3', 'nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1'] 56736 9930 LDLGWPLTF True PC9_epitope_Rep1 1060.5593325396 1060.55822993586 43.058 2 -0.5496620164317744 0.1604557207498384 0.9734250823132922 ['ENSG00000180921|ENST00000388913|FAM83H'] 67746 4000 LSYHRMWMVRW True NCI_RA007_Epitope_Rep2 1563.75912914199 1563.75748490379 20.197 3 -0.5496728025149196 0.1604557207498384 0.9734302651635971 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 33239 5395 GKETRCSP True NCI_RA007_Epitope_Rep2 876.4123510360799 876.41124993586 25.604 2 -0.5497430747917569 0.16046669467696584 0.9734640407135016 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 15987 7281 EDRKNEDL True PC9_epitope_Rep5 1017.4727023631699 1017.47160993586 32.97 2 -0.5497432029759428 0.16046669467696584 0.9734641023377213 ['ENST00000517548.1_1_6:109409388-109415153:-|nuORF'] 134480 11588 VYPRVSVATI True NCI_RA007_Epitope_Rep4 1103.6338944621898 1103.63278993586 51.521 2 -0.5497950289034317 0.1604750747353963 0.9734890216946682 ['ENST00000351266.8_1_9:34551676-34551760:-|nuORF'] 121542 21612 VFCDYLSGLDL True PC9_epitope_Rep5 1243.5794759308299 1243.57836993586 88.171 2 -0.5498986409266886 0.1604750747353963 0.9735388662398635 ['ENST00000261537.6_1_18:19445454-19445538:+|nuORF'] 60402 12881 LGTNGARKASK True H1975_Epitope_Rep3 1101.62545503681 1101.6243499358602 54.771 2 -0.5499234904510324 0.1604750747353963 0.9735508255336005 ['ENST00000286657.9_2_4:73434696-73434942:-|nuORF'] 46129 16039 ISKDTEPVELN True PC9_epitope_Rep2 1243.62959692739 1243.6284899358602 66.95 2 -0.5499557046419943 0.16051836411524228 0.9735663320642924 ['ENSG00000089775|ENST00000608382|ZBTB25'] 58885 6498 LETAMHVKEK True NCI_RA007_Epitope_Rep5 1184.62234380232 1184.62124993586 31.66 2 -0.5499657156037057 0.16051836411524228 0.9735711515687541 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 81084 12098 PITHIHHCP True H1975_Epitope_Rep2 1053.51781916413 1053.5167299358602 51.618 2 -0.5499924622321104 0.16054808686659772 0.973584029530934 ['ENSG00000154309|ENST00000675850|DISP1'] 9664 16933 AYEQNKLSL True PC9_epitope_Rep6 1064.55022440788 1064.54912993586 77.676 2 -0.5500457230189083 0.16057521408951364 0.9736096801481176 ['ENSG00000142207|ENST00000382751|URB1'] 4495 16585 AIYDPLRYSV True PC9_epitope_Rep5 1195.6237237013102 1195.62262993586 68.8 2 -0.5500556673578055 0.16057521408951364 0.9736144703603195 ['ENSG00000255223|ENST00000528616|OR5M11'] 59644 19969 LGAASWWWL True PC9_epitope_Rep4 1088.5443511818 1088.54324993586 84.944 2 -0.5500691661114053 0.16058618238221417 0.9736209732347822 ['nc|ENSG00000171867|F7VJQ1|PRNP'] 36217 19608 GVCRYLRIR True PC9_epitope_Rep3 1134.6444166595797 1134.64276490379 80.659 3 -0.5500820900592495 0.16058618238221417 0.9736271997340155 ['chr12:54284317-54285974|541|118.72|0.0|23.5|+|0|HNRNPA1,HNRNPA1|2'] 98081 7077 SERDMKVV True PC9_epitope_Rep2 962.4855159763399 962.48440993586 32.619 2 -0.5501157230819254 0.1605945552952581 0.9736434058863089 ['ENST00000338274.4_1_2:26033192-26033372:-|nuORF'] 102348 10282 SLSTVFVVLG True H1975_Epitope_Rep2 1020.5855472874398 1020.58444993586 44.556 2 -0.5501290290730059 0.1605945552952581 0.9736498183815452 ['ENSG00000134255|ENST00000357172|CEPT1'] 84679 12461 QDKIFRAHKVV True NCI_RA007_Epitope_Rep5 1339.77245362367 1339.7713499358601 54.588 2 -0.5501380512260958 0.1605945552952581 0.9736541666998458 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000529348.1_1_11:130109693-130131768:-|nuORF', 'nc|ENSG00000196323|Q8NCP5-3|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-4|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-2|ZBTB44'] 3868 5825 AGYNNTFP True PC9_epitope_Rep5 882.38718183406 882.38608993586 27.398 2 -0.550206720636509 0.16062427297402093 0.9736872709232955 ['ENSG00000105088|ENST00000264833|OLFM2'] 82125 8704 PNFLKFLAP True NCI_RA007_Epitope_Rep4 1045.59605240149 1045.59494993586 40.27 2 -0.5502509622009455 0.16063783382070213 0.9737086067225368 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'TBC1D1|p.P709Hfs*44|1|0.41|ENSG00000065882|chr4:38090002-38090002|C/-|frameshift_variant', 'ENST00000469803.1_1_4:38051397-38056602:+|nuORF'] 101609 5952 SLLQRQLDP True H1975_Epitope_Rep3 1068.5927579262 1068.5916699358602 27.905 2 -0.5502570422237408 0.1606436083423531 0.9737115393319953 ['ENSG00000185038|ENST00000389758|MROH2A'] 126391 6514 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 32.663 3 -0.5502637728720629 0.1606436083423531 0.9737147858954286 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 33285 6978 GKKSGFVN True NCI_RA007_Epitope_Rep5 835.45520182423 835.45410993586 33.523 2 -0.5502710282105112 0.1606436083423531 0.97371828570399 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 130012 11257 VSAGENGGFL True PC9_epitope_Rep4 949.4505103666098 949.44940993586 51.073 2 -0.5502758554099602 0.1606436083423531 0.9737206143249684 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20'] 18197 17559 EILRKVSIL True PC9_epitope_Rep1 1069.68593003505 1069.68482993586 72.333 2 -0.5504005676891677 0.1606842853450504 0.9737808001940644 ['nc|ENSG00000186314|Q8N945-2|PRELID2', 'ENSG00000186314|ENST00000683046|PRELID2'] 38160 4971 HDGWPMICLEK True NCI_RA007_Epitope_Rep2 1327.6053138391896 1327.6042099358601 23.958 2 -0.5504242163385943 0.1606842853450504 0.9737922184517042 ['ENST00000450600.1_1_7:56296937-56297204:-|nuORF', 'nc|ENSG00000107443|Q5T5M9-2|CCNJ', 'nc|ENSG00000107443|Q5T5M9|CCNJ', 'ENSG00000107443|ENST00000465148|CCNJ'] 72269 6362 MHWKMRSHFNR True NCI_RA007_Epitope_Rep5 1528.7292259960398 1528.7275649037902 31.146 3 -0.550431831825007 0.1606842853450504 0.9737958958021594 ['nc|ENSG00000292332|P26951-2|IL3RA', 'ENSG00000185291|ENST00000331035|IL3RA'] 34046 18858 GLVLSLEEQL True PC9_epitope_Rep1 1099.61249031127 1099.6119749679299 77.321 1 -0.5505111995046968 0.1607139972538567 0.9738342314806907 ['ENSG00000116830|ENST00000369466|TTF2'] 80598 11771 PGQLKILTG True PC9_epitope_Rep2 925.55966689277 925.55856993586 50.609 2 -0.5505511114442365 0.16072236221489952 0.9738535169294105 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 16373 6154 EEIQEVRSKSD True NCI_RA007_Epitope_Rep1 1318.6364732129798 1318.6353699358601 27.975 2 -0.5505548296008012 0.16072236221489952 0.9738553137960438 ['nc|ENSG00000131828|P08559-3|PDHA1', 'ENSG00000131828|ENST00000422285|PDHA1', 'nc|ENSG00000131828|P08559-2|PDHA1', 'nc|ENSG00000131828|P08559-4|PDHA1'] 43966 17969 IIEDSTDFF True PC9_epitope_Rep2 1085.49170647225 1085.4906099358602 74.421 2 -0.5505781033297054 0.16072236221489952 0.9738665622294699 ['nc|ENSG00000136010|Q3SY69-3|ALDH1L2', 'ENSG00000136010|ENST00000258494|ALDH1L2'] 58464 9940 LEPSFVCQQP True NCI_RA007_Epitope_Rep5 1146.5379454720198 1146.5368499358601 44.876 2 -0.5506542201560563 0.16075207158894506 0.9739033621022857 ['ENST00000444315.6_1_12:3192825-3310384:+|nuORF'] 47378 15199 IVIIEHKSI True PC9_epitope_Rep5 1050.6437308699 1050.6426299358602 63.469 2 -0.550676437981675 0.16079793248263607 0.9739141070745926 ['nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'nc|ENSG00000103342|P15170|GSPT1', 'ENSG00000189369|ENST00000340438|GSPT2'] 94545 21897 RRRTARTA True PC9_epitope_Rep4 986.5845932843398 986.58348993586 92.437 2 -0.5506979340984995 0.16081148745780233 0.9739245044844023 ['FGF10|p.Y88Tfs*26|1|0.07|ENSG00000070193|chr5:44388421-44388421|A/-|frameshift_variant'] 3686 8976 AGRASYRPPTP True PC9_epitope_Rep2 1171.6098049726697 1171.60816490379 39.881 3 -0.5508361457610799 0.16083599832025067 0.9739913903304855 ['ENST00000606645.1_1_1:2477953-2478280:+|nuORF'] 10525 23023 CLCSAAPT True H1975_Epitope_Rep3 764.3196965212001 764.31858993586 96.167 2 -0.55085159910907 0.16083599832025067 0.9739988725083162 ['ENST00000483032.1_1_1:155726496-155726922:-|nuORF'] 23027 19732 EVGCWGLCI True PC9_epitope_Rep5 978.4303095993398 978.42920993586 80.945 2 -0.5508541548621907 0.16083599832025067 0.9740001100209765 ['nc|ENSG00000164175|Q9UMX9-4|SLC45A2', 'nc|ENSG00000164175|Q9UMX9-3|SLC45A2', 'ENSG00000164175|ENST00000296589|SLC45A2', 'ENST00000509381.1_1_5:33951596-33982427:-|nuORF', 'nc|ENSG00000164175|Q9UMX9-2|SLC45A2'] 65173 4868 LQQEHLFTG True NCI_RA007_Epitope_Rep2 1071.53490869691 1071.53380993586 23.559 2 -0.5509242376750934 0.16087405923963952 0.9740340525636985 ['ENST00000341183.9_2_1:47023869-47024013:-|nuORF'] 60700 15425 LHPRHQRIL True PC9_epitope_Rep3 1168.69414373332 1168.6924949037902 64.487 3 -0.5509295283006754 0.16087405923963952 0.9740366155472496 ['ENSG00000229474|ENST00000682850|PATL2', 'ENST00000560780.1_2_15:44964301-44966556:-|nuORF'] 129302 22143 VQVVIEEL True PC9_epitope_Rep1 927.5276980581499 927.52660993586 89.987 2 -0.5509598572407449 0.16087405923963952 0.9740513097523752 ['nc|nan|Q9H972-2|C14orf93', 'ENSG00000100802|ENST00000299088|C14orf93'] 74079 20162 NDNLLKALQL True PC9_epitope_Rep5 1140.65027280232 1140.64916993586 82.601 2 -0.5509676560178932 0.16087405923963952 0.9740550886835001 ['ENSG00000196604|ENST00000409914|POTEF'] 129837 24977 VRRPHVVG True NCI_RA007_Epitope_Rep5 918.5511678977399 918.5506149679301 103.57 1 -0.5511127543735015 0.16093606162890228 0.9741254315339064 ['nc|ENSG00000072518|Q7KZI7-15|MARK2'] 60415 18450 LGVAYFDSSFD True PC9_epitope_Rep5 1219.53971929383 1219.53808490379 75.989 3 -0.5511330278023278 0.16094961240310077 0.9741352652402653 ['ENST00000547851.1_1_12:47610056-47610092:-|nuORF'] 18116 15013 EIIIFWVEVFS True H1975_Epitope_Rep3 1380.73293979712 1380.73184993586 63.139 2 -0.5512603428185785 0.16098506257569642 0.9741970494216728 ['ENST00000374902.8_1_9:103084020-103088649:-|nuORF'] 14640 7073 DVDRERREHER True NCI_RA007_Epitope_Rep1 1495.7239998611096 1495.72234490379 31.506 3 -0.5512702917875726 0.16098506257569642 0.9742018796634029 ['ENSG00000213923|ENST00000396832|CSNK1E'] 8476 20614 ATQTALDLLL True PC9_epitope_Rep2 1057.60192562757 1057.60137496793 84.726 1 -0.5512973667386969 0.16098506257569642 0.9742150261763154 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 124693 13867 VGYREGPTV True PC9_epitope_Rep5 976.4977949121999 976.49668993586 58.36 2 -0.5513137089561888 0.16098506257569642 0.9742229624197233 ['ENSG00000163807|ENST00000296121|KIAA1143'] 139779 11508 YPFPRTVNDYT True H1975_Epitope_Rep3 1371.64591569787 1371.6448099358602 49.39 2 -0.5513344164439143 0.16098506257569642 0.9742330197694203 ['ENST00000551454.1_1_10:94449743-94451337:+|nuORF', 'ENSG00000152804|ENST00000282728|HHEX'] 68745 19227 LTLDRAQLL True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 79.329 2 -0.5513828331121556 0.16099861124568032 0.9742565403661803 ['ENST00000325167.9_1_17:78973043-78973379:+|nuORF'] 130675 6077 VSTLKSNP True NCI_RA007_Epitope_Rep2 844.4654321547599 844.46432993586 28.244 2 -0.551478466413498 0.1610231071065252 0.9743030202872848 ['nc|nan|Q32NC0-2|C18orf21', 'ENSG00000141428|ENST00000592875|C18orf21'] 97555 13446 SEESHEQF True H1975_Epitope_Rep1 991.38830403287 991.38720993586 56.834 2 -0.5514917004412176 0.1610231071065252 0.9743094545909711 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS', 'ENST00000571885.1_1_17:79662737-79663393:+|nuORF'] 83915 7916 PVQDTPVA True NCI_RA007_Epitope_Rep2 825.4232329896099 825.4226849679301 35.425 1 -0.5515009245257989 0.1610231071065252 0.9743139396113101 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 10944 8443 DAGAGIALNDH True PC9_epitope_Rep6 1052.48868678048 1052.4875899358601 42.171 2 -0.5516528804369406 0.1610986420371058 0.9743878636562516 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 107437 8056 SVLRIQTVI True NCI_RA007_Epitope_Rep4 1027.6389798426299 1027.6378899358601 37.762 2 -0.5516566840621974 0.1610986420371058 0.9743897149909315 ['ENSG00000119574|ENST00000594051|ZBTB45'] 71241 16722 LYPKTLFLL True NCI_RA007_Epitope_Rep5 1106.67396836902 1106.67286993586 71.085 2 -0.5516657838921091 0.16110698485484548 0.9743941443266284 ['PPP3CA|p.F239Lfs*64|1|0.32|ENSG00000138814|chr4:101093841-101093841|A/-|frameshift_variant', 'nc|ENSG00000138814|Q08209-5|PPP3CA', 'nc|ENSG00000138814|Q08209-3|PPP3CA', 'nc|ENSG00000138814|Q08209-2|PPP3CA', 'ENSG00000138814|ENST00000394854|PPP3CA'] 127162 9760 VLVASYTHF True NCI_RA007_Epitope_Rep2 1035.53893144819 1035.5378299358601 42.585 2 -0.5516679203482654 0.16110698485484548 0.9743951842828804 ['nc|ENSG00000204936|Q8N6Q3|CD177', 'ENSG00000204936|ENST00000618265|CD177'] 105729 11525 SSFKDDVDLK True PC9_epitope_Rep1 1152.5662683948397 1152.56516993586 49.211 2 -0.551743747350579 0.16110698485484548 0.9744321036446064 ['nc|ENSG00000183853|Q96J84-2|KIRREL1', 'ENSG00000183853|ENST00000359209|KIRREL1', 'nc|ENSG00000183853|Q96J84-3|KIRREL1'] 86427 5372 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 25.515 3 -0.5517789813379649 0.16115282150641802 0.9744492648323158 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 127906 14708 VPGRRGFP True PC9_epitope_Rep3 884.4980696957199 884.49696993586 61.715 2 -0.5518946392494176 0.16118251097907518 0.97450562483161 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENST00000523482.5_1_8:20072298-20072553:+|nuORF', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 115998 16954 TSLAPPLAPA True PC9_epitope_Rep1 936.5280324113199 936.52692993586 70.037 2 -0.551944484479969 0.16120699397794605 0.9745299272125039 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 73878 17104 NATQFLALV True PC9_epitope_Rep4 975.5389314481898 975.53782993586 73.795 2 -0.5519605897266079 0.16120699397794605 0.9745377810838187 ['ENSG00000162391|ENST00000302250|FAM151A', 'FAM151A|p.T243Ffs*18|1|0.06|ENSG00000162391|chr1:54612543-54612559|GACCGTACAGGGAAGGT/-|frameshift_variant', 'nc|ENSG00000162391|Q8WW52-2|FAM151A'] 74675 11603 NGPASAAVLP True PC9_epitope_Rep2 895.4763311916299 895.4752299358599 49.956 2 -0.551977604371689 0.16120699397794605 0.9745460793052799 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 55419 7126 LAEYKFEFLQT True H1975_Epitope_Rep1 1387.7023679448298 1387.7012699358602 32.435 2 -0.5520280796568006 0.16123668065870198 0.9745707019073014 ['ENSG00000147251|ENST00000276202|DOCK11', 'ENST00000553480.1_1_14:45332380-45332650:-|nuORF'] 85585 19930 QGGITSITL True PC9_epitope_Rep1 888.4916469026 888.49054993586 81.481 2 -0.5520703129356984 0.1613147995673302 0.9745913099863714 ['nc|ENSG00000166596|Q8N1V2-3|CFAP52', 'ENSG00000166596|ENST00000352665|CFAP52', 'nc|ENSG00000166596|Q8N1V2-2|CFAP52', 'ENST00000576630.5_1_17:9487588-9546512:+|nuORF'] 11518 13660 DFLIRHHGPK True H1975_Epitope_Rep3 1218.6621748987002 1218.66106993586 57.834 2 -0.552098902416464 0.16134448354912662 0.9746052635842084 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 123882 11577 VGRRRIKL True NCI_RA007_Epitope_Rep3 996.6668663563198 996.66576993586 52.668 2 -0.5521564302602413 0.1613554177967196 0.9746333486842831 ['ENSG00000170340|ENST00000301998|B3GNT2'] 3206 10561 AGELFSVGGDL True PC9_epitope_Rep3 1063.51858992643 1063.51748993586 45.57 2 -0.5521782319748317 0.1613554177967196 0.9746439949416674 ['ENST00000562846.1_1_16:67595386-67595647:-|nuORF'] 114468 15250 TPWPRGRLLTA True PC9_epitope_Rep1 1266.71968977482 1266.7180349037899 63.479 3 -0.5522019391863385 0.16135853686096627 0.9746555733503482 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 86436 5828 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 30.632 3 -0.5522153178392153 0.16135853686096627 0.9746621081357241 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 88779 9239 QTQQEEREVAL True NCI_RA007_Epitope_Rep2 1329.65245763029 1329.6513699358602 40.548 2 -0.5522251853840305 0.16135853686096627 0.9746669282763005 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 105859 11953 SSLVPEDSPHV True NCI_RA007_Epitope_Rep5 1165.56151736757 1165.5604299358602 52.633 2 -0.5522277607418635 0.16135853686096627 0.9746681863471884 ['ENSG00000197077|ENST00000358431|KIAA1671'] 126390 6070 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 30.859 3 -0.5522440374406524 0.16135853686096627 0.9746761380383518 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 80650 7093 PGSSPRSSPR True NCI_RA007_Epitope_Rep2 1026.5206556151 1026.5195499358601 32.213 2 -0.5522579977515383 0.1613720742534302 0.9746829587450575 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 57629 7868 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 35.25 2 -0.5523785779452891 0.1614017529983374 0.9747418963765927 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 98680 15738 SGEDAFVF True PC9_epitope_Rep2 870.37594844402 870.3753949679301 65.807 1 -0.5524136764283264 0.1614074731660076 0.9747590602557951 ['DCAF8L1|p.V310F|1|0.35|ENSG00000226372|chrX:27980407-27980407|C/A|missense_variant'] 50048 22837 KKFEKRHIEIF True PC9_epitope_Rep1 1473.8456185639295 1473.84452993586 92.64 2 -0.5524188178324927 0.1614074731660076 0.9747615748219948 ['ENSG00000079246|ENST00000392132|XRCC5'] 33759 16039 GLKIGDTV True PC9_epitope_Rep6 801.45961849833 801.45852993586 74.017 2 -0.5524251827607127 0.1614074731660076 0.9747646879023518 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 126065 11520 VLEEYDWTSF True PC9_epitope_Rep4 1287.5659340416698 1287.56428490379 52.074 3 -0.5524294060363848 0.1614074731660076 0.9747667535702657 ['ENSG00000105464|ENST00000263269|GRIN2D', 'GRIN2D|p.R478Afs*15|1|0.33|ENSG00000105464|chr19:48414878-48414878|C/-|frameshift_variant'] 58933 19998 LETPPVLFIPN True PC9_epitope_Rep3 1238.69107498514 1238.68996993586 82.168 2 -0.5524935245052726 0.16143454331229723 0.97479812151636 ['nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3', 'ENST00000461318.1_1_1:24668655-24669644:+|nuORF'] 141753 9687 YTYSQASEI True PC9_epitope_Rep3 1060.4713053808398 1060.47020993586 42.208 2 -0.5524995384267711 0.16143454331229723 0.97480106427629 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1'] 121142 9314 VERVPFDAATL True PC9_epitope_Rep1 1216.6451874218797 1216.6435349037902 40.682 3 -0.5525458002226581 0.16144807773007522 0.9748237049627375 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14', 'ENST00000373807.5_1_9:124074589-124093809:+|nuORF'] 115366 2843 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 15.521 3 -0.5526435905529218 0.16145900581020012 0.9748715851057318 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 80228 7414 PGALDAVR True H1975_Epitope_Rep3 797.43955176009 797.43900496793 33.496 1 -0.5526725313909452 0.16145900581020012 0.9748857606376177 ['ENST00000579023.5_1_17:73127274-73127802:-|nuORF', 'nc|ENSG00000125458|Q8TCD5-2|NT5C', 'ENSG00000125458|ENST00000245552|NT5C', 'ENST00000583655.5_1_17:73127274-73127514:-|nuORF'] 100343 24511 SKNVRTILIEI True PC9_epitope_Rep4 1284.7765359446 1284.7759749679299 102.77 1 -0.5526890850625465 0.16147253917786994 0.9748938699309444 ['ENST00000231498.7_1_5:37291884-37291974:-|nuORF'] 60141 16288 LGNALIVVTI True PC9_epitope_Rep5 1011.63283183303 1011.63172993586 67.645 2 -0.5527271049145394 0.16151313665999611 0.9749124981551226 ['ENSG00000166884|ENST00000300127|OR4D6', 'OR4D6|p.A110Qfs*8|1|0.14|ENSG00000166884|chr11:59457285-59457285|G/-|frameshift_variant'] 33688 12776 GLGVEQLP True PC9_epitope_Rep1 811.4439684341899 811.44286993586 54.017 2 -0.5527508810324734 0.16151313665999611 0.9749241497075803 ['ENSG00000169710|ENST00000306749|FASN'] 142936 17171 YYYRRRHRHER True H1975_Epitope_Rep1 1690.8665222042198 1690.8654299358602 71.499 2 -0.5527789401626017 0.16151313665999611 0.9749379023314322 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 13840 11392 DQLSKLKDER True H1975_Epitope_Rep3 1230.65681473474 1230.6557099358602 48.933 2 -0.5528481087137423 0.16152145496796683 0.9749718139300552 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 95453 12902 RWLEKEERFLK True NCI_RA007_Epitope_Rep2 1532.8463468399198 1532.84470490379 54.806 3 -0.5528503461011797 0.16152145496796683 0.9749729111021905 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 129876 20932 VRRVGGAFGGK True NCI_RA007_Epitope_Rep2 1102.6359601508595 1102.63486993586 86.574 2 -0.5528622387932748 0.16152145496796683 0.974978743301001 ['ENSG00000138356|ENST00000374700|AOX1'] 89555 10470 QYLYLECNVIK True H1975_Epitope_Rep3 1384.7060734262798 1384.7049699358602 45.336 2 -0.5528814976372183 0.16153498579912212 0.9749881887645193 ['SLITRK2|p.Y456C|1|0.22|ENSG00000185985|chrX:145823792-145823792|A/G|missense_variant'] 81277 15045 PKVKNNVEIDE True PC9_epitope_Rep6 1283.6721304457099 1283.6710299358601 69.909 2 -0.5530361673837962 0.16154851619358065 0.9750640860252504 ['ENSG00000218819|ENST00000405799|TDRD15'] 14471 7694 DTFDYVDKF True H1975_Epitope_Rep3 1148.50260550912 1148.5015099358602 34.576 2 -0.5530974780704278 0.16156204615136358 0.9750941910049881 ['nc|ENSG00000168060|Q9UQQ1-8|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-2|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-3|NAALADL1', 'ENSG00000168060|ENST00000358658|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-4|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-7|NAALADL1', 'ENST00000531174.1_1_11:64813863-64815169:-|nuORF'] 135334 22866 WGKKMKGKI True PC9_epitope_Rep3 1074.6372060208198 1074.63610993586 93.222 2 -0.553099525573208 0.16156254033819542 0.9750951965670516 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 112028 15256 TISEVYELC True H1975_Epitope_Rep1 1055.48451291683 1055.48397496793 63.947 1 -0.5531406563943508 0.16156254033819542 0.9751153991866155 ['ENSG00000168676|ENST00000304372|KCTD19'] 15455 3884 EALKFCEEFKE True NCI_RA007_Epitope_Rep2 1371.6380534361099 1371.63694993586 19.744 2 -0.5531554654198849 0.16156254033819542 0.9751226742898493 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 127898 19608 VPGLSLPAAAI True PC9_epitope_Rep5 1007.6015317047498 1007.60042993586 80.474 2 -0.55316302349316 0.16156254033819542 0.9751263875269376 ['ENST00000005340.9_1_17:7128967-7129144:-|nuORF'] 28296 7169 FRQQRKEHIR True NCI_RA007_Epitope_Rep4 1396.7799986155999 1396.7783549037902 34.199 3 -0.5531716003508249 0.16156254033819542 0.9751306014890067 ['ENST00000466600.1_1_1:186823486-186908166:+|nuORF', 'PLA2G4A|p.D613*|1|0.18|ENSG00000116711|chr1:186977661-186977662|-/T|frameshift_variant', 'ENSG00000116711|ENST00000367466|PLA2G4A'] 142462 3368 YYGDHGYGCCG True PC9_epitope_Rep2 1193.3906296153298 1193.38897490379 18.224 3 -0.5531871588167491 0.16156254033819542 0.975138246187182 ['ENSG00000186930|ENST00000334897|KRTAP6-2'] 123567 13258 VGPRRKLNEI True NCI_RA007_Epitope_Rep3 1180.70403971068 1180.70294993586 59.424 2 -0.553221511184047 0.16160573106586207 0.9751551278254244 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 120269 9706 VEDDVGGV True PC9_epitope_Rep3 788.3552129994399 788.35466496793 42.289 1 -0.5532224896627774 0.16160573106586207 0.9751556087254655 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 61456 11379 LIYNMEM[Oxidation]ARKI True H1975_Epitope_Rep3 1396.7206783250397 1396.71958993586 48.881 2 -0.5532426668381635 0.16165152713015699 0.9751655259698163 ['MRPS21|p.R62L|1|0.18|ENSG00000266472|chr1:150308149-150308149|G/T|missense_variant'] 64383 13902 LPLPPPQLSI True NCI_RA007_Epitope_Rep3 1073.6484818971699 1073.64738993586 62.002 2 -0.5533191415770622 0.1616811874798322 0.9752031246653964 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 68515 6423 LTGCSEPR True PC9_epitope_Rep1 861.4014519992099 861.40034993586 29.512 2 -0.5533725225526903 0.16172698084896986 0.9752293793964477 ['ENST00000521647.1_1_8:42044914-42045541:-|nuORF'] 115370 3984 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 20.233 3 -0.5534442036786696 0.16174050530799264 0.9752646477695478 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 81972 15064 PLTLSPAAPA True PC9_epitope_Rep6 936.5280324113198 936.52692993586 69.994 2 -0.5534951278070892 0.1617701627865705 0.9752897123298395 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 67797 10775 LTAAAQPLKAK True NCI_RA007_Epitope_Rep1 1110.6760936273397 1110.6749899358601 45.907 2 -0.5535393016671316 0.16178107606679035 0.9753114604816716 ['nc|ENSG00000149476|Q3LXA3-2|TKFC', 'ENSG00000149476|ENST00000394900|TKFC', 'ENST00000530329.1_1_11:61112942-61113484:+|nuORF', 'ENST00000525366.5_1_11:61112846-61113972:+|nuORF'] 89375 19916 QWTSRKRK True PC9_epitope_Rep6 1088.6203100867199 1088.61920993586 89.263 2 -0.5535611534607375 0.16178107606679035 0.9753222208610276 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 130594 16304 VSSGQKQHV True PC9_epitope_Rep6 968.5039429218001 968.50284993586 75.075 2 -0.553564708200624 0.16178154893452276 0.9753239714347408 ['ENST00000551617.1_1_12:100594834-100598785:+|nuORF'] 79785 15635 PEEETELDNL True PC9_epitope_Rep5 1187.51937777207 1187.5182899358601 65.15 2 -0.5535953573608996 0.16178154893452276 0.9753390664759133 ['nc|ENSG00000117751|Q12972-2|PPP1R8', 'ENSG00000117751|ENST00000311772|PPP1R8'] 69364 6390 LTVTGAVPVA True H1975_Epitope_Rep2 926.54368247546 926.54258993586 29.503 2 -0.5536374561238153 0.16178154893452276 0.9753598049446993 ['ENSG00000197110|ENST00000413851|IFNL3', 'ENSG00000183709|ENST00000331982|IFNL2'] 136389 11384 WTQMWNRPCR True PC9_epitope_Rep3 1376.623029592 1376.62138490379 48.791 3 -0.5536642434537581 0.16178154893452276 0.9753730034083167 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 8516 3254 ATSSTLVSK True NCI_RA007_Epitope_Rep2 892.48656152216 892.48546993586 17.314 2 -0.5536713806982928 0.16178154893452276 0.9753765203657705 ['ENST00000332782.6_1_12:57640633-57642538:-|nuORF'] 115371 3061 TRKDKEESKKK True PC9_epitope_Rep4 1375.7783268497494 1375.77667490379 17.516 3 -0.5536823728686332 0.16178154893452276 0.9753819371648347 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 37719 8303 GWACMAPR True NCI_RA007_Epitope_Rep2 890.3891134936999 890.38856496793 36.936 1 -0.5537157719778334 0.1617898506307062 0.9753983979209633 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 44320 16402 ILDKKFTV True PC9_epitope_Rep5 962.5800679841799 962.57896993586 68.089 2 -0.5537324984922933 0.1617898506307062 0.9754066427770187 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:418974-419244:-|nuORF'] 42104 18648 IDLNDDNICSV True PC9_epitope_Rep3 1219.53906767083 1219.53796993586 76.947 2 -0.5537531305915938 0.1617898506307062 0.9754168138726154 ['ENST00000493464.1_1_21:19186244-19191642:-|nuORF', 'ENST00000482915.1_1_21:19190494-19191672:-|nuORF', 'nc|ENSG00000154642|Q9NYK6-2|EURL', 'nc|ENSG00000154642|Q9NYK6-3|EURL', 'ENSG00000154642|ENST00000284881|C21orf91'] 75591 20675 NLDLANINLML True PC9_epitope_Rep5 1242.6642086143 1242.6631099358601 84.581 2 -0.5537613165285005 0.1618033712396161 0.9754208496638556 ['ENST00000579008.1_1_18:8412788-8413139:+|nuORF'] 14244 9691 DSLPLVDTHS True NCI_RA007_Epitope_Rep4 1082.52440358286 1082.5233099358602 44.126 2 -0.5537793918492552 0.16180953148939603 0.9754297617438212 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000487938.5_1_10:17278234-17279267:+|nuORF'] 104438 11032 SQLKKFYNQ True PC9_epitope_Rep3 1154.6084079903399 1154.60730993586 47.428 2 -0.5537888073473459 0.16180953148939603 0.9754344044439419 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.L617Afs*13|1|0.14|ENSG00000151655|chr10:7734980-7735002|TCTCTAGACCACCACATTGTGAC/-|frameshift_variant'] 25244 8513 FDIQLLTHN True H1975_Epitope_Rep3 1099.56620882519 1099.5651099358602 37.731 2 -0.5538149172213271 0.16180953148939603 0.9754472803070514 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 9242 16123 AVPEEGLAQV True PC9_epitope_Rep1 1011.5236753068697 1011.52256993586 66.833 2 -0.5538633321705725 0.16180953148939603 0.9754711608235103 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'nc|ENSG00000182095|O15417-4|TNRC18'] 98853 8582 SGTSDPYVKI True NCI_RA007_Epitope_Rep1 1065.5342399905699 1065.5331499358601 37.385 2 -0.5538680263456712 0.16180953148939603 0.975473476561645 ['ENSG00000170743|ENST00000318881|SYT9'] 96684 12901 SALAEKIKV True PC9_epitope_Rep6 957.5858816406098 957.58478993586 61.156 2 -0.5538713679978254 0.16180953148939603 0.9754751251087739 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 36827 7967 GVLGAVEG True PC9_epitope_Rep1 700.3755545212 700.3750049679301 35.467 1 -0.553891684014293 0.16180953148939603 0.9754851483458633 ['XKR6|p.G192V|1|0.24|ENSG00000171044|chr8:11200765-11200765|C/A|missense_variant'] 130383 14897 VSLDDGWI True PC9_epitope_Rep4 903.43379767331 903.43270993586 65.241 2 -0.5539793368951332 0.16180953148939603 0.975528406617699 ['ENSG00000163214|ENST00000457308|DHX57'] 13409 8301 DLYSPKRLF True H1975_Epitope_Rep2 1137.61824439805 1137.6166049037902 36.882 3 -0.5539802021501402 0.16180953148939603 0.9755288337440058 ['nc|ENSG00000149380|Q7Z4N8-2|P4HA3', 'ENST00000525968.1_1_11:73984627-74015361:-|nuORF', 'ENSG00000149380|ENST00000331597|P4HA3', 'nc|ENSG00000149380|Q7Z4N8-3|P4HA3'] 42747 10074 IELLSAGGA True H1975_Epitope_Rep2 829.4545331178899 829.4539849679301 43.742 1 -0.5540256204616013 0.16180953148939603 0.9755512570761313 ['nc|ENSG00000164808|Q14159-2|SPIDR', 'ENSG00000164808|ENST00000297423|SPIDR', 'ENST00000518060.5_2_8:48644710-48648009:+|nuORF'] 125509 24680 VKAKKKKKKKK True NCI_RA007_Epitope_Rep3 1340.9707595073994 1340.96966993586 106.73 2 -0.5540912214670795 0.16183917685385285 0.9755836549121262 ['ENSG00000189134|ENST00000343684|NKAPL'] 117242 21689 TVLRIERCML True PC9_epitope_Rep3 1232.67333382936 1232.67222993586 88.721 2 -0.5541246528162951 0.16184272054436688 0.9756001699921567 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'PIEZO2|p.N2125Tfs*10|1|0.09|ENSG00000154864|chr18:10697862-10697862|T/-|frameshift_variant', 'PIEZO2|p.S2477Lfs*18|1|0.26|ENSG00000154864|chr18:10681672-10681672|A/-|frameshift_variant'] 75344 6444 NIQTVKRLRT True NCI_RA007_Epitope_Rep1 1227.7411534953899 1227.73951490379 29.086 3 -0.5541447916428502 0.16184272054436688 0.9756101200679025 131666 12459 VTLVVSNVS True PC9_epitope_Rep1 916.52294703088 916.52184993586 52.789 2 -0.5541516063519039 0.16184272054436688 0.9756134872952044 ['ENST00000566733.2_1_6:3909509-3909881:-|nuORF'] 38589 8096 HEYKGCHLAR True PC9_epitope_Rep1 1212.58221032584 1212.58057490379 35.967 3 -0.5541554839669085 0.16184272054436688 0.9756154033275741 ['CON__Q2HJF0'] 92754 5474 RPAAGFVA True PC9_epitope_Rep6 787.4340724568299 787.43296993586 28.998 2 -0.5541692013090407 0.16184272054436688 0.975622181764704 ['ENSG00000141526|ENST00000582743|SLC16A3'] 39411 25055 HKRYKIQKKVR True PC9_epitope_Rep2 1482.9259345732999 1482.92482993586 102.04 2 -0.5541789400507787 0.16184272054436688 0.9756269944894753 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 59795 8851 LGEMWSEQSAK True NCI_RA007_Epitope_Rep5 1264.5757875327201 1264.57468993586 40.71 2 -0.554192493920337 0.16184272054436688 0.9756336930245328 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 117385 23873 TVPLDLLLVP True PC9_epitope_Rep3 1078.66379760814 1078.66327496793 97.115 1 -0.5541965213417963 0.16184272054436688 0.9756356835374672 ['ENST00000501133.2_1_4:103749296-103764608:+|nuORF'] 89196 11334 QVSPRARFP True H1975_Epitope_Rep1 1056.5828619488398 1056.5817699358602 48.575 2 -0.5542093459951211 0.16184272054436688 0.9756420222936939 ['nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2'] 83437 17147 PTNFVAPTV True PC9_epitope_Rep4 944.4967322830399 944.49562993586 73.963 2 -0.5542503240261555 0.16184272054436688 0.97566227928081 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 56231 19561 LCLFLAHLLF True PC9_epitope_Rep4 1188.6729228232 1188.6718299358602 83.365 2 -0.5542551122908054 0.16184272054436688 0.9756646466033462 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000127507|Q9UHX3-5|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-4|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-6|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-3|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-2|ADGRE2', 'ENSG00000127507|ENST00000315576|ADGRE2', 'nc|ENSG00000268758|Q86SQ3|ADGRE4P'] 43287 13182 IFSTDGVPV True H1975_Epitope_Rep2 933.4807478657299 933.47964993586 55.829 2 -0.5543243958315318 0.16187235963752458 0.9756989075232847 ['ENSG00000182095|ENST00000430969|TNRC18'] 65025 6666 LQIHSAGGRAK True NCI_RA007_Epitope_Rep1 1136.6414394541198 1136.63980490379 29.94 3 -0.5543783271591083 0.1618832634633989 0.975725585864082 ['ENSG00000186513|ENST00000641291|OR9Q2'] 142145 15289 YVRRETEEVF True PC9_epitope_Rep4 1326.65681473474 1326.6557099358602 66.738 2 -0.5543834244146674 0.1618832634633989 0.9757281077486032 ['nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3', 'CLIC4-GRHL3|1|fusion', 'CLIC4-GRHL3|2|fusion'] 136230 20343 WRTRSLLKRKT True NCI_RA007_Epitope_Rep5 1443.8786500277097 1443.87700490379 85.186 3 -0.5544532117341052 0.1618967768981474 0.9757626424141752 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 117793 14841 TVWERELRKEW True NCI_RA007_Epitope_Rep2 1530.7943112670596 1530.7932099358602 62.402 2 -0.5545191425174354 0.1619347037484885 0.9757952808645235 ['ENST00000590898.5_1_18:33620811-33647397:-|nuORF'] 18508 10840 EKGYWSFFMYV True H1975_Epitope_Rep2 1455.65330957743 1455.6522099358601 46.724 2 -0.5545537328975431 0.1619347037484885 0.9758124092574394 ['ENST00000290858.10_1_16:67133564-67133669:+|nuORF'] 86797 8418 QLNIELEAAHH True NCI_RA007_Epitope_Rep2 1273.64149902377 1273.6404099358601 37.385 2 -0.5545556611994488 0.1619347037484885 0.975813364205638 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF'] 142484 14892 YYICLRRRA True NCI_RA007_Epitope_Rep5 1212.65498134328 1212.6538899358602 63.951 2 -0.5545586283176712 0.1619347037484885 0.9758148336239949 ['ENSG00000112234|ENST00000369244|FBXL4'] 91785 25196 RKGKKKKRWH True PC9_epitope_Rep5 1350.8472903297798 1350.8461899358601 102.06 2 -0.5545901651771303 0.16199397036774307 0.9758304532306279 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 12444 21749 DIWIIYEQVII True PC9_epitope_Rep3 1403.7700535818299 1403.76894993586 88.953 2 -0.5546169122598095 0.16199397036774307 0.9758437026640338 ['EMC2|p.M60I|1|0.49|ENSG00000104412|chr8:108450453-108450453|G/T|missense_variant'] 124335 7485 VGTRYKCSVCP True NCI_RA007_Epitope_Rep2 1211.57909909135 1211.57800993586 33.744 2 -0.5546359186373423 0.1620157663103932 0.9758531188386785 ['ENSG00000161011|ENST00000389805|SQSTM1', 'nc|ENSG00000161011|Q13501-2|SQSTM1', 'ENST00000466342.1_1_5:179250916-179260288:+|nuORF'] 68876 16466 LTNEGAKAL True PC9_epitope_Rep5 915.5025459394699 915.50144993586 68.335 2 -0.5546370658110197 0.1620157663103932 0.9758536872048318 ['ENST00000536374.1_1_9:80851502-80863830:+|nuORF', 'nc|ENSG00000148019|Q5JTW2|CEP78', 'ENSG00000148019|ENST00000643273|CEP78', 'nc|ENSG00000148019|Q5JTW2-5|CEP78', 'nc|ENSG00000148019|Q5JTW2-2|CEP78'] 11304 8739 DEIYEGEYQ True H1975_Epitope_Rep2 1144.4560492395199 1144.4549499358602 38.576 2 -0.5546474625214952 0.1620157663103932 0.9758588384077088 ['nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A', 'SV2A|p.E138Rfs*39|1|0.19|ENSG00000159164|chr1:149913429-149913429|C/-|frameshift_variant', 'ENSG00000122012|ENST00000502798|SV2C', 'ENSG00000185518|ENST00000394232|SV2B'] 94507 22382 RRRRRRWQ True PC9_epitope_Rep6 1268.7551212804399 1268.7540299358602 99.062 2 -0.5546592740499829 0.1620157663103932 0.9758646909571792 ['ENST00000487093.5_1_3:51575631-51661706:+|nuORF'] 16278 12657 EEFGGLVSA True NCI_RA007_Epitope_Rep4 907.4287122928698 907.42816496793 55.715 1 -0.5547099631630931 0.16202405132669181 0.9758898114153356 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant'] 142365 7437 YYEIRYLFYKR True NCI_RA007_Epitope_Rep2 1612.84019883032 1612.83856490379 33.555 3 -0.5547099642706423 0.16202405132669181 0.9758898119642894 ['VPS13C|p.Q3390L|1|0.27|ENSG00000129003|chr15:61877028-61877028|T/A|missense_variant'] 34047 18544 GLVLSLEEQL True PC9_epitope_Rep2 1099.61249031127 1099.6119749679299 76.681 1 -0.5547200971067321 0.16202405132669181 0.9758948344147623 ['ENSG00000116830|ENST00000369466|TTF2'] 116901 9554 TVFLRKRSQWW True NCI_RA007_Epitope_Rep5 1505.82555182569 1505.8239149037902 43.387 3 -0.554747203975722 0.16203755944225035 0.9759082715866765 ['ENST00000267838.6_1_15:52016999-52017185:-|nuORF'] 64050 8253 LPAPADQTQP True H1975_Epitope_Rep3 1036.5189242796 1036.5178299358602 36.73 2 -0.5547624839164828 0.16205106712231607 0.9759158468907212 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS'] 122184 20669 VGAKQKKWKP True PC9_epitope_Rep3 1168.7080624619598 1168.7069699358601 84.776 2 -0.554808444691688 0.16205934976385822 0.9759386365422181 ['GPR153|p.K124Rfs*65|1|0.11|ENSG00000158292|chr1:6254133-6254133|T/-|frameshift_variant', 'ENSG00000158292|ENST00000377893|GPR153'] 2021 13618 AEKEKTLY True H1975_Epitope_Rep2 980.51786165044 980.51676993586 57.519 2 -0.5548210473963163 0.16205934976385822 0.9759448865820756 ['ENST00000337198.9_1_8:103870367-103876119:-|nuORF'] 68892 13040 LTNISALE True NCI_RA007_Epitope_Rep4 859.46509780159 859.46454496793 57.26 1 -0.5548747232863006 0.16205934976385822 0.975971510737984 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 69580 17623 LVDIYGSVP True H1975_Epitope_Rep2 961.51204799401 961.51094993586 73.104 2 -0.5549364558841507 0.1621050934880722 0.9760021406572993 ['ENSG00000142619|ENST00000375460|PADI3', 'PADI3|p.T25N|1|0.21|ENSG00000142619|chr1:17249211-17249211|C/A|missense_variant'] 94421 19089 RRRRPPPA True NCI_RA007_Epitope_Rep4 1004.6104141093598 1004.60930993586 82.573 2 -0.554949503340042 0.162115985945005 0.9760086157231435 ['ENST00000397992.5_1_16:72984846-73092758:-|nuORF'] 30288 5203 GAAEPQQLP True NCI_RA007_Epitope_Rep3 909.45559574705 909.45448993586 27.464 2 -0.554964147377412 0.162115985945005 0.9760158836635539 ['ENST00000417456.1_1_1:35441975-35442986:-|nuORF'] 111791 10272 TILANQTLLVE True H1975_Epitope_Rep1 1213.69180326113 1213.69070993586 44.455 2 -0.5550700788007201 0.1621377687522161 0.97606847510423 ['SEZ6L|p.V347I|1|0.24|ENSG00000100095|chr22:26296957-26296957|G/A|missense_variant'] 137808 10582 YEQMERRRERR True H1975_Epitope_Rep1 1607.8062900164298 1607.8046549037902 45.658 3 -0.5550939440877436 0.1621377687522161 0.9760803275200992 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4'] 114776 18927 TQKVAIIELT True PC9_epitope_Rep2 1114.6597748568597 1114.6586699358602 78.167 2 -0.5550955297681246 0.1621377687522161 0.9760811150829056 ['ENSG00000139618|ENST00000380152|BRCA2'] 41379 9668 HYCVSCTI True PC9_epitope_Rep1 924.38335940692 924.38226993586 42.043 2 -0.5550970590737261 0.1621377687522161 0.9760818746522201 ['ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 88909 18875 QVESVQLKV True PC9_epitope_Rep5 1028.5866099165999 1028.58607496793 77.622 1 -0.5551355316282336 0.16216738923719115 0.9761009850700946 ['ENST00000492185.5_1_6:31920080-31921650:-|nuORF', 'ENST00000488426.5_1_6:31920080-31922695:-|nuORF', 'nc|ENSG00000204356|P18615-4|NELFE', 'ENSG00000204356|ENST00000375429|NELFE', 'nc|ENSG00000204356|P18615-3|NELFE'] 54647 7911 KYLLHRGLP True NCI_RA007_Epitope_Rep3 1095.6552986131098 1095.65420993586 38.228 2 -0.5551676159434011 0.16217827845734822 0.9761169252418536 ['VWA2|p.D165Mfs*9|1|0.3|ENSG00000165816|chr10:114272857-114272857|G/-|frameshift_variant', 'nc|ENSG00000165816|Q5GFL6-2|VWA2', 'ENSG00000165816|ENST00000392982|VWA2'] 15799 13146 EDDFIEEGI True H1975_Epitope_Rep2 1065.45023558309 1065.44967496793 55.688 1 -0.5551714030807056 0.16217827845734822 0.9761188069506834 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 13247 16583 DLSSRSLLGI True PC9_epitope_Rep2 1059.59242357303 1059.5913299358601 69.023 2 -0.5551942730716413 0.16219178082191782 0.9761301711255226 ['ENSG00000117724|ENST00000366955|CENPF'] 4525 4851 AKGQQMRKGP True H1975_Epitope_Rep3 1099.59204673355 1099.5909499358602 23.785 2 -0.555218616151951 0.16220528275128523 0.9761422687885382 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000463906.1_1_1:43630116-43636618:-|nuORF'] 105206 27628 SRHGSRNPRSH True NCI_RA007_Epitope_Rep1 1289.64496169477 1289.64331490379 115.68 3 -0.555302178127468 0.1622270566433003 0.9761838079588872 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant'] 107958 8473 SVYDSVLQK True NCI_RA007_Epitope_Rep4 1037.5393253710097 1037.53822993586 39.398 2 -0.5553158693842435 0.1622270566433003 0.9761906157019763 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 115379 4192 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 23.079 3 -0.555327328766622 0.1622270566433003 0.9761963140585755 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 138074 3253 YGEYEWVHKPR True NCI_RA007_Epitope_Rep1 1462.6993482530597 1462.69771490379 16.546 3 -0.5553314432671131 0.1622270566433003 0.9761983601414068 ['ENSG00000117133|ENST00000370654|RPF1'] 60727 24925 LHRFGRGL True NCI_RA007_Epitope_Rep1 954.5511678977398 954.55006993586 103.16 2 -0.5553638032464525 0.16223271403019707 0.976214453833773 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 90957 4210 REYRDLTTA True NCI_RA007_Epitope_Rep3 1123.56218607391 1123.56055490379 23.214 3 -0.5553921035994203 0.16223271403019707 0.9762285307658476 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000600238.1_1_19:17972170-17973061:+|nuORF'] 60725 25026 LHRFGRGL True H1975_Epitope_Rep1 954.5511678977398 954.55006993586 103.64 2 -0.5554349050272256 0.16223271403019707 0.9762498246444998 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 37301 9141 GVSAATFLK True NCI_RA007_Epitope_Rep3 892.50181766348 892.50072993586 43.041 2 -0.5554427976930688 0.16223271403019707 0.9762537517939565 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL'] 60726 24907 LHRFGRGL True H1975_Epitope_Rep3 954.5511678977398 954.55006993586 103.61 2 -0.5555527484093695 0.16229193857656177 0.9763084766077408 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 88915 16365 QVFLKPWIF True NCI_RA007_Epitope_Rep4 1176.6695516949196 1176.66844993586 70.952 2 -0.5555567185967327 0.16229193857656177 0.9763104532359876 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 126405 4452 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 23.769 3 -0.5556069323392787 0.16230020623872132 0.976335456525433 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 126414 9517 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 41.954 3 -0.5556164397756542 0.16230020623872132 0.9763401913581906 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 63722 10334 LNDAFQKGGP True PC9_epitope_Rep3 1045.51925863277 1045.5181699358602 44.693 2 -0.5556341636750739 0.16230020623872132 0.9763490187181851 ['ENSG00000120915|ENST00000521400|EPHX2', 'ENST00000520623.5_1_8:27348689-27396319:+|nuORF'] 121618 11516 VFGNVTSI True PC9_epitope_Rep2 835.44396843419 835.44286993586 49.622 2 -0.5556491309766568 0.16231108819643605 0.9763564737837624 ['KCNH8|p.A471S|1|0.4|ENSG00000183960|chr3:19450141-19450141|G/T|missense_variant'] 39942 19912 HPILNDPIY True PC9_epitope_Rep2 1080.56039516876 1080.55928993586 81.987 2 -0.5557069695085917 0.16231108819643605 0.9763852879544557 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 19320 9869 ELKTVEKP True H1975_Epitope_Rep2 942.5385970950199 942.53750993586 42.947 2 -0.5557174410777644 0.16232458472296069 0.9763905056219727 ['nc|ENSG00000152763|Q5VTH9-2|DNAI4', 'ENSG00000152763|ENST00000371026|DNAI4'] 12236 19363 DIITRENVL True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 79.857 2 -0.5557971893407566 0.16237030353805504 0.9764302509085233 ['nc|ENSG00000135931|Q7Z3E5-2|ARMC9', 'ENSG00000135931|ENST00000611582|ARMC9'] 60912 6873 LIAAIELMKC[Carbamidomethyl]N True H1975_Epitope_Rep3 1274.6726654024499 1274.6715699358601 31.396 2 -0.5558352436473372 0.1623972933784437 0.9764492222532561 ['nc|ENSG00000145016|Q92622-3|RUBCN', 'nc|ENSG00000145016|Q92622-2|RUBCN', 'ENSG00000145016|ENST00000296343|RUBCN'] 65865 4750 LSDLQTAAA True NCI_RA007_Epitope_Rep5 888.4552613938799 888.45416993586 24.955 2 -0.5558397135544931 0.1623972933784437 0.9764514508914826 ['ENSG00000120329|ENST00000239451|SLC25A2'] 133158 25511 VVRHLIRA True NCI_RA007_Epitope_Rep3 962.6137681542999 962.61266993586 110.29 2 -0.5558706090986402 0.1624081711560768 0.9764668563900393 81016 9901 PILRNKIEFKR True NCI_RA007_Epitope_Rep1 1412.86160298124 1412.8599449037902 42.515 3 -0.5558738096209292 0.1624081711560768 0.9764684524094739 ['ENSG00000138002|ENST00000260570|IFT172'] 112033 18952 TISGLLGLSL True PC9_epitope_Rep2 972.58554728744 972.58444993586 78.263 2 -0.5558915079229718 0.1624216648140093 0.9764772785701055 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000488412.2_1_9:34648936-34649266:+|nuORF'] 125908 16313 VLCDPQEG True NCI_RA007_Epitope_Rep5 859.37456854503 859.37346993586 69.503 2 -0.555929378894986 0.16243515803718142 0.9764961675064909 ['GRID1|p.L304V|1|0.16|ENSG00000182771|chr10:85869051-85869051|G/C|missense_variant'] 57644 13358 LEEELDLLL True PC9_epitope_Rep3 1085.58560685709 1085.58450993586 56.415 2 -0.5559735283682488 0.16246214317932856 0.9765181925191535 ['ENSG00000169857|ENST00000306730|AVEN'] 105533 16550 SSAQFYVT True PC9_epitope_Rep1 901.4181476091699 901.4175949679301 68.483 1 -0.5560003800083264 0.16246214317932856 0.9765315904837911 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 73815 17795 NAKEFFENWVL True PC9_epitope_Rep5 1395.68230120659 1395.6812099358601 73.466 2 -0.5560828115875522 0.16247865725975322 0.976572732003039 ['ENST00000533972.5_1_11:76158022-76224483:+|nuORF'] 23127 5785 EVKDVQLHLER True NCI_RA007_Epitope_Rep5 1364.7412130650398 1364.7395549037901 28.939 3 -0.5560943242360405 0.16247865725975322 0.9765784793009901 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 128431 14942 VPRRVGGG True H1975_Epitope_Rep2 796.4667695674398 796.46566993586 62.626 2 -0.5561084445803564 0.16247865725975322 0.9765855288519876 ['ENSG00000162104|ENST00000294016|ADCY9'] 135436 5866 WHREKRRQRNK True H1975_Epitope_Rep1 1592.8872576487995 1592.88562490379 27.633 3 -0.5561209105479664 0.16247865725975322 0.9765917528704533 ['SEMA3D|p.G747Afs*10|1|0.46|ENSG00000153993|chr7:84999534-84999534|C/-|frameshift_variant', 'ENSG00000153993|ENST00000284136|SEMA3D'] 94261 21679 RRQWRRRRRPQ True PC9_epitope_Rep3 1649.9675736581698 1649.96646993586 88.687 2 -0.5561290970934895 0.16247865725975322 0.9765958404653068 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 93722 3703 RQYKNQKESEK True NCI_RA007_Epitope_Rep1 1436.7371903137598 1436.73553490379 18.37 3 -0.5561348744668799 0.16247865725975322 0.9765987252450371 ['ENSG00000076650|ENST00000170564|GPATCH1'] 69010 7355 LTPSTGTMEL True NCI_RA007_Epitope_Rep3 1048.51106201784 1048.50996993586 36.055 2 -0.5561746173617593 0.1625082550778796 0.9766185720568099 ['ENST00000502744.1_1_4:101404610-101439092:-|nuORF', 'ENST00000506323.1_1_4:101395197-101439143:-|nuORF'] 98517 20466 SFLTFAPSVL True PC9_epitope_Rep1 1080.58554728744 1080.5844499358602 83.534 2 -0.5561812199625521 0.16251912700330193 0.9766218696429965 ['ENSG00000106038|ENST00000496902|EVX1', 'nc|ENSG00000106038|P49640-2|EVX1'] 136198 16985 WRRWCWRWPWR True PC9_epitope_Rep1 1772.8735221609597 1772.87242993586 70.156 2 -0.5561894004272933 0.16251912700330193 0.9766259554230026 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 56377 13793 LDDSALYLSDK True PC9_epitope_Rep2 1238.60304782638 1238.6019499358601 58.339 2 -0.5562283223640453 0.16255697466539967 0.9766453974706469 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 52468 21273 KKTRVYHRQWK True PC9_epitope_Rep6 1528.8738990004397 1528.87280993586 94.68 2 -0.5562325114656549 0.16255697466539967 0.976647490207761 ['ENST00000586052.5_1_17:76435259-76454697:-|nuORF'] 84075 4125 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 20.786 2 -0.55624230788964 0.16255697466539967 0.9766523843471275 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 2368 4046 AEQAERYDEM-[Oxidation] True H1975_Epitope_Rep2 1256.49793151528 1256.4968299358602 20.642 2 -0.5562902650141061 0.16255697466539967 0.9766763463800581 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 60729 26082 LHRFGRGL True PC9_epitope_Rep1 954.5511678977398 954.55006993586 105.58 2 -0.5563403712913078 0.16260267353841198 0.9767013882808608 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 102942 20637 SPDWEPMLGL True PC9_epitope_Rep6 1143.52704643515 1143.5259499358601 92.116 2 -0.5563841393995906 0.16264575146556723 0.9767232675483035 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 123972 10513 VGSALTVPL True PC9_epitope_Rep5 855.50656869075 855.50546993586 45.425 2 -0.5563878451360553 0.16264575146556723 0.9767251202261851 ['ENST00000581764.1_1_17:61907522-61908306:+|nuORF'] 112640 11457 TLFEQQNMY True H1975_Epitope_Rep3 1172.51721002744 1172.5161099358602 49.188 2 -0.5564132960278617 0.16267272200212582 0.976737845269698 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6', 'ENST00000574094.5_1_16:16275679-16317348:-|nuORF'] 3571 8873 AGLYECVA True NCI_RA007_Epitope_Rep2 824.3738402690399 824.3732949679301 39.158 1 -0.5564143369484291 0.16267272200212582 0.97673836574712 ['ENSG00000144619|ENST00000418658|CNTN4', 'CNTN4|p.R342Kfs*7|1|0.07|ENSG00000144619|chr3:2900766-2900767|-/CAAAAGTACACTT|frameshift_variant', 'CNTN4|p.G444Efs*5|1|0.82|ENSG00000144619|chr3:2925747-2925747|G/-|frameshift_variant', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF', 'CNTN4|p.E288D|1|0.4|ENSG00000144619|chr3:2887148-2887148|G/T|missense_variant'] 132484 14734 VVDGNFEEV True PC9_epitope_Rep4 1006.46074069714 1006.46017496793 64.607 1 -0.5564393305664225 0.16269969080133986 0.97675086375906 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 60094 13777 LGLRPLHQL True PC9_epitope_Rep5 1045.63964854897 1045.63854993586 58.012 2 -0.5564616090012826 0.16269969080133986 0.9767620053276858 ['ENST00000318430.9_1_17:76134666-76137438:+|nuORF'] 95379 6000 RVYIKLYGD True NCI_RA007_Epitope_Rep5 1125.61824439805 1125.6166049037902 29.762 3 -0.5566596726255625 0.16279107217623756 0.9768611106214856 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 13487 9020 DNIQTVKRLRT True PC9_epitope_Rep4 1342.7680965192199 1342.76698993586 42.267 2 -0.556665057096531 0.16279107217623756 0.9768638061647066 34399 4596 GPGSLTSRTRP True H1975_Epitope_Rep2 1127.6047195922301 1127.60362993586 22.783 2 -0.5567097964527045 0.16282065733747725 0.9768862059867188 ['nc|ENSG00000078319|A4D2B8-3|PMS2P1', 'nc|ENSG00000078319|A4D2B8-2|PMS2P1', 'nc|ENSG00000078319|A4D2B8|PMS2P1'] 73084 12410 MREREREQRWR True H1975_Epitope_Rep1 1630.8222744337397 1630.82116993586 52.769 2 -0.5567654916110715 0.16284761920097904 0.976914097703577 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 13133 10279 DLRCLHQDP True PC9_epitope_Rep1 1095.51312770651 1095.51202993586 44.424 2 -0.5568204827290236 0.16284761920097904 0.9769416440000884 ['ENST00000469537.1_1_1:156169610-156169919:+|nuORF', 'ENST00000423538.6_1_1:156163924-156169919:+|nuORF'] 49966 8369 KIMNMIKLY True PC9_epitope_Rep4 1152.6399084427599 1152.63826490379 39.649 3 -0.5568966334597354 0.16290678389127738 0.9769798012965333 ['ENSG00000143368|ENST00000271628|SF3B4'] 105210 28084 SRHGSRNPRSH True NCI_RA007_Epitope_Rep1 1289.64496169477 1289.64331490379 118.29 3 -0.5569075467844474 0.16290678389127738 0.9769852708057063 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant'] 66909 3976 LSNNHQCK True NCI_RA007_Epitope_Rep2 942.4341491098199 942.43304993586 20.101 2 -0.5569390275655465 0.1629202627850058 0.977001049800448 ['ZBTB41|p.K534Nfs*4|1|0.06|ENSG00000177888|chr1:197181065-197181065|C/-|frameshift_variant', 'nc|ENSG00000177888|Q5SVQ8-2|ZBTB41', 'ENST00000467322.1_1_1:197145142-197169603:-|nuORF', 'ZBTB41|p.V653Yfs*59|1|0.05|ENSG00000177888|chr1:197175038-197175038|C/-|frameshift_variant', 'ENSG00000177888|ENST00000367405|ZBTB41'] 117577 11122 TVSPASLLT True NCI_RA007_Epitope_Rep5 887.49639792987 887.49530993586 49.417 2 -0.5569725717893157 0.16293374124466628 0.9770178655671375 ['nc|ENSG00000224975|O15225|INE1'] 35916 5279 GTRRFHVWWRP True NCI_RA007_Epitope_Rep2 1496.79016937648 1496.78851490379 25.156 3 -0.5570238707902099 0.16294197204868938 0.9770435868376844 ['chr21:41324031-41338378|115|14.89|0.91|4.03|+|1|TE_info:MLT1A0,MLT1A0_dup20330,ERVL-MaLR,LTR,donor,-,41323855,41324031|None,FAM3B|2'] 76318 12443 NPSPYHLYY True H1975_Epitope_Rep1 1152.52400966004 1152.52290993586 52.899 2 -0.5570283888341646 0.16294197204868938 0.9770458524700001 ['ENSG00000020633|ENST00000308873|RUNX3', 'nc|ENSG00000020633|Q13761-2|RUNX3'] 33755 17063 GLKIGDTV True PC9_epitope_Rep4 801.45961849833 801.45852993586 73.63 2 -0.5570346825691778 0.16294197204868938 0.9770490086237626 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 102711 19028 SMDILMLLLL True PC9_epitope_Rep4 1160.65488980056 1160.65378993586 81.281 2 -0.5570520477240756 0.16295544929076303 0.9770577172930148 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1'] 129536 24621 VRLAGGGGG True PC9_epitope_Rep4 742.4085859849799 742.40803496793 103.2 1 -0.5572234776032466 0.16300112703268393 0.9771437265849268 ['ENST00000366878.8_1_1:223536770-223537465:-|nuORF'] 57837 10819 LEEVELDER True H1975_Epitope_Rep3 1130.54553295026 1130.54442993586 46.694 2 -0.5572447917327693 0.16304680330376262 0.9771544248806807 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'nc|ENSG00000132003|Q9H7M6|ZSWIM4', 'ZSWIM4|p.Q790Rfs*107|1|0.35|ENSG00000132003|chr19:13830447-13830447|C/-|frameshift_variant'] 102691 11644 SLYSGLSTPP True H1975_Epitope_Rep2 1020.51277627 1020.51166993586 49.858 2 -0.5572832203143225 0.16306027820710975 0.97717371607811 ['nc|ENSG00000113916|P41182-2|BCL6', 'ENSG00000113916|ENST00000406870|BCL6'] 137975 17536 YFLSVVLSAF True H1975_Epitope_Rep3 1144.61684741572 1144.61627496793 73.224 1 -0.5572995253347981 0.16306850197214842 0.9771819022152299 ['chr10:133400890-133401529|109|12.2|0.0|20.22|+|0|TE_info:L1MB3,L1MB3_dup10751,L1,LINE,donor,-,133400616,133400890|None,MTG1|3'] 31756 4007 GEHREGFETQ True NCI_RA007_Epitope_Rep4 1188.5159641574799 1188.5148699358601 21.667 2 -0.5573027248065223 0.16306850197214842 0.9771835086190596 ['ENSG00000196110|ENST00000591998|ZNF699'] 128163 4217 VPLQEGKEA True PC9_epitope_Rep1 969.5131106231698 969.51200993586 21.115 2 -0.5573247625531337 0.16306850197214842 0.9771945740393249 ['ENST00000493195.5_1_1:159902482-159902782:-|nuORF'] 105211 28211 SRHGSRNPRSH True NCI_RA007_Epitope_Rep1 1289.64496169477 1289.64331490379 119.02 3 -0.5573565579413804 0.16308197565844548 0.9772105407894487 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant'] 113517 13436 TLTIETVI True PC9_epitope_Rep5 888.5167990212799 888.51570993586 56.698 2 -0.5574042232799782 0.16312764621601172 0.977234481170537 ['ENSG00000183378|ENST00000533663|OVCH2', 'nc|ENSG00000183378|Q7RTZ1|OVCH2', 'OVCH2|p.K221Rfs*38|1|0.47|ENSG00000183378|chr11:7701375-7701375|C/-|frameshift_variant'] 80996 15008 PIIWPQWCKEL True PC9_epitope_Rep5 1411.7322286044698 1411.73059490379 62.731 3 -0.557495708683811 0.16314111851637206 0.9772804445977018 ['ENST00000367139.7_1_1:205744106-205744529:-|nuORF', 'ENST00000414729.1_1_1:205744259-205744529:-|nuORF', 'ENST00000468887.1_1_1:205739472-205744529:-|nuORF'] 67694 16787 LSWKQQVL True PC9_epitope_Rep6 1000.5705659296399 1000.56946993586 77.072 2 -0.5574981159912995 0.16315196394075981 0.9772816543066727 ['ENSG00000179134|ENST00000610417|SAMD4B', 'ENST00000595476.1_1_19:39869154-39871842:+|nuORF'] 128676 7865 VPVRLEAA True PC9_epitope_Rep4 853.5021520166498 853.50104993586 37.673 2 -0.5574991708354899 0.16315196394075981 0.9772821843860526 ['ENSG00000205978|ENST00000382554|NYNRIN'] 117962 14601 TYALSSVGSPK True PC9_epitope_Rep5 1108.57643915572 1108.57534993586 61.164 2 -0.557547426508673 0.16318186939655865 0.9773064363729758 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 80488 6660 PGLRPSHPP True PC9_epitope_Rep1 956.5191990631199 956.51810993586 30.422 2 -0.557550317194256 0.16318186939655865 0.9773078893133258 ['ENSG00000133246|ENST00000423345|PRAM1'] 82822 6490 PRRYEEWKWFR True H1975_Epitope_Rep1 1651.83717913855 1651.8355349037902 30.025 3 -0.5575597620505649 0.16318186939655865 0.9773126366915081 ['ENSG00000164867|ENST00000297494|NOS3', 'ENST00000468293.5_1_7:150707648-150709543:+|nuORF', 'ENST00000477227.1_1_7:150707648-150711254:+|nuORF'] 79431 4485 PATSSHHLLRQ True PC9_epitope_Rep4 1245.6578177942501 1245.65617490379 23.723 3 -0.5575631341797491 0.16318186939655865 0.9773143317108874 ['ENST00000339464.8_1_22:46318425-46318659:-|nuORF'] 22717 7739 ETSEEKPPAE True H1975_Epitope_Rep2 1115.4982484046698 1115.49714993586 34.72 2 -0.5575719212731679 0.16318186939655865 0.9773187487075659 ['ENSG00000136478|ENST00000584379|TEX2', 'nc|ENSG00000136478|Q8IWB9-2|TEX2'] 76734 18726 NQVALPNI True PC9_epitope_Rep5 867.48141657207 867.4808649679301 77.046 1 -0.5575760604244182 0.16318186939655865 0.9773208293871221 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 64346 15325 LPLGWCAVV True PC9_epitope_Rep5 956.5153595526399 956.5142699358599 63.958 2 -0.5575776007229002 0.16318186939655865 0.9773216036779119 ['ENST00000527215.6_1_8:11721919-11725594:-|nuORF'] 102532 13893 SLVRAILGT True PC9_epitope_Rep4 928.5705659296399 928.56946993586 61.341 2 -0.5576182197104371 0.16322753026010817 0.9773420242352713 ['nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 40697 20928 HRRVRLHRHG True NCI_RA007_Epitope_Rep4 1322.76568596414 1322.7645899358602 90.694 2 -0.5576881704801796 0.16323837115725093 0.9773771991948277 ['ENSG00000178184|ENST00000353265|PARD6G'] 13240 13363 DLSSGTMVDVP True PC9_epitope_Rep1 1119.51179029383 1119.51068993586 56.26 2 -0.557705338001046 0.16323837115725093 0.9773858335348287 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 96565 6600 SAEVELQAK True NCI_RA007_Epitope_Rep5 973.5080252427299 973.50692993586 32.046 2 -0.5577658212932249 0.16324395660990762 0.9774162583741631 ['ENSG00000171051|ENST00000304748|FPR1'] 137625 12299 YEGKFQIQS True H1975_Epitope_Rep3 1098.53457434374 1098.53346993586 52.489 2 -0.5577670834846965 0.16324395660990762 0.9774168933755029 ['ENST00000395834.5_1_14:50796549-50796777:-|nuORF'] 80106 8231 PFNHTTTVNTI True NCI_RA007_Epitope_Rep1 1243.61970095003 1243.6186099358601 36.015 2 -0.5577763671204825 0.16324395660990762 0.9774215640233382 ['ENSG00000148948|ENST00000528697|LRRC4C'] 107800 9253 SVTLHWDLP True PC9_epitope_Rep3 1066.54474510462 1066.54364993586 40.537 2 -0.5577805851661817 0.16324395660990762 0.9774236862053555 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 138451 21880 YHLNKYYNE True PC9_epitope_Rep1 1242.5669371011797 1242.56530490379 88.974 3 -0.5578154555050344 0.16327351734127304 0.9774412315991352 ['ENSG00000180660|ENST00000379919|MAB21L1'] 123653 13536 VGQLRDDPPGP True PC9_epitope_Rep1 1149.5778361380499 1149.57619490379 56.922 3 -0.5578502966715332 0.16328435553695866 0.9774587648703974 ['ENST00000559270.5_2_14:24505681-24505804:+|nuORF'] 69397 6610 LTWKRWRRCWE True H1975_Epitope_Rep1 1618.8303199362997 1618.82866490379 30.481 3 -0.5578801998864965 0.16328435553695866 0.9774738152246564 ['ENST00000415950.4_2_19:35528037-35528250:+|nuORF'] 57373 12235 LEALNTLSEAK True H1975_Epitope_Rep1 1187.63976768827 1187.6386699358602 52.083 2 -0.5579109106791367 0.16329782097911102 0.977489273979151 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 66594 15258 LSIRPVGTI True PC9_epitope_Rep4 954.5862159937799 954.58510993586 66.621 2 -0.5579282794668529 0.1633112859878659 0.9774980176980348 ['ENST00000515837.6_1_11:61165820-61165925:+|nuORF'] 102042 7665 SLQVPLKDAK True H1975_Epitope_Rep1 1097.6444591458896 1097.6433699358602 34.455 2 -0.5581356543751015 0.16344823146985935 0.977602461540224 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A'] 33282 7479 GKKSGFVN True NCI_RA007_Epitope_Rep1 835.45520182423 835.45410993586 33.083 2 -0.5581464448522235 0.16344823146985935 0.9776078985429847 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 3003 22211 AFIVFTEAI True NCI_RA007_Epitope_Rep1 1009.54843350273 1009.54732993586 90.982 2 -0.5581504028356833 0.16344823146985935 0.9776098929131289 ['ENSG00000174358|ENST00000304460|SLC6A19'] 94345 18687 RRRLLGPQP True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66648993586 76.829 2 -0.5581567044590997 0.16345906282183317 0.9776130682747435 ['ENST00000262435.13_1_17:62658063-62658153:-|nuORF'] 89306 17779 QWGRKAKRPLN True NCI_RA007_Epitope_Rep4 1352.7789359864398 1352.7778299358602 76.971 2 -0.5581813286724707 0.16345906282183317 0.9776254770827684 ['ENST00000360472.8_1_1:160183673-160183802:+|nuORF'] 115369 3055 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 16.54 3 -0.558243958318646 0.16350238125884928 0.9776570433642825 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 33536 15545 GLEAKLLQTV True PC9_epitope_Rep2 1070.63356010902 1070.6324699358602 65.066 2 -0.5582558170827951 0.16350238125884928 0.9776630212460418 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 79375 19041 PASLKEEV True PC9_epitope_Rep2 871.46509780159 871.46400993586 78.607 2 -0.5582679727770965 0.16350238125884928 0.9776691490992736 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH9|p.H149Sfs*27|1|0.11|ENSG00000100345|chr22:36341416-36341417|-/G|frameshift_variant', 'MYH9|p.Q267Sfs*15|1|0.19|ENSG00000100345|chr22:36320847-36320868|GGTCCGTTCTTCCTTGGCTTGG/-|frameshift_variant', 'MYH9-ORAOV1|1|fusion'] 33058 15299 GILMYELL True PC9_epitope_Rep2 950.5146908462999 950.51358993586 64.129 2 -0.5582736308990438 0.16350238125884928 0.9776720015373346 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'nc|ENSG00000185532|Q13976-3|PRKG1', 'ENST00000373975.2_1_10:53822369-54053657:+|nuORF'] 133976 19717 VYIQLVPEL True PC9_epitope_Rep6 1072.6168474157198 1072.61627496793 88.5 1 -0.5583373422305442 0.16350238125884928 0.9777041248346172 ['ENST00000262293.8_2_17:57262525-57262892:+|nuORF'] 99804 13308 SIKLTCTLS True PC9_epitope_Rep1 964.52631815916 964.52522993586 56.052 2 -0.5583407470632216 0.16350238125884928 0.9777058417805504 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 85517 10946 QGAGSVLF True NCI_RA007_Epitope_Rep3 777.40210362221 777.40100993586 50.143 2 -0.55834748667703 0.16350238125884928 0.9777092404154109 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 110171 7928 TEPPKEGGEA True H1975_Epitope_Rep2 1013.4665543535698 1013.46544993586 35.44 2 -0.5583510114024709 0.16350238125884928 0.9777110178905621 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'EPG5|p.R635Afs*6|1|0.08|ENSG00000152223|chr18:45943201-45943201|G/-|frameshift_variant'] 94346 18778 RRRLLGPQP True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66648993586 77.184 2 -0.5583750591998 0.16351583994336558 0.9777231455506462 ['ENST00000262435.13_1_17:62658063-62658153:-|nuORF'] 113109 12471 TLPAGFCEL True PC9_epitope_Rep2 949.45790424617 949.45680993586 53.28 2 -0.5583817872943735 0.16354538726389292 0.9777265388326795 ['MFHAS1|p.Q787Lfs*54|1|0.11|ENSG00000147324|chr8:8890696-8890699|TACT/-|frameshift_variant', 'ENSG00000147324|ENST00000276282|MFHAS1'] 100603 11319 SLCVQHEVCC True PC9_epitope_Rep2 1119.45112169691 1119.4500299358601 48.861 2 -0.5583958560436808 0.1635588448234253 0.9777336346267692 ['ENST00000262150.6_1_18:64239265-64271331:-|nuORF'] 113562 16126 TLTVLNILN True PC9_epitope_Rep2 999.5964463243099 999.59534993586 67.285 2 -0.558452366050668 0.1636044790527061 0.9777621402513216 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6', 'ENST00000574094.5_1_16:16275679-16317348:-|nuORF'] 83188 15189 PSTGVDTM True H1975_Epitope_Rep1 806.34801944402 806.3474749679301 63.687 1 -0.5585265464435295 0.16361267073151112 0.977799568903432 ['ENSG00000008838|ENST00000394128|MED24', 'nc|ENSG00000008838|O75448-2|MED24'] 19952 13323 ELVQRCQQLQ True PC9_epitope_Rep6 1243.63430546835 1243.6332099358601 62.904 2 -0.5585434562290621 0.16361267073151112 0.9778081024439892 ['ENSG00000266028|ENST00000573034|SRGAP2', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 11498 4447 DFICEAQNP True NCI_RA007_Epitope_Rep5 1035.4331460503097 1035.43204993586 23.748 2 -0.5585624466740928 0.16361267073151112 0.9778176866503085 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 68764 11031 LTLFCLHVFW True H1975_Epitope_Rep2 1277.66308641549 1277.6619899358602 47.46 2 -0.5586216181196196 0.16365303561661465 0.9778475540855873 ['ENST00000355451.7_1_7:44425089-44425335:-|nuORF'] 56004 10060 LASLEDEL True PC9_epitope_Rep6 888.4440280038399 888.44292993586 49.287 2 -0.5586477543920826 0.16365303561661465 0.9778607487925065 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'PPRC1|p.L407Sfs*10|1|0.17|ENSG00000148840|chr10:102139725-102139725|C/-|frameshift_variant'] 129486 24789 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 107.77 2 -0.5586602481924303 0.16365303561661465 0.9778670566574263 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 91298 3466 RGQEGRPGAP True NCI_RA007_Epitope_Rep2 1023.5209899682698 1023.5198899358601 18.14 2 -0.5587437109658507 0.16369866319193088 0.9779092029162213 ['ENSG00000215018|ENST00000399429|COL28A1', 'nc|ENSG00000215018|Q2UY09-2|COL28A1', 'COL28A1|p.Q974Lfs*9|1|0.12|ENSG00000215018|chr7:7370870-7370871|-/A|frameshift_variant'] 95338 16310 RVRVKGGG True H1975_Epitope_Rep3 827.5089687325898 827.50786993586 68.21 2 -0.5588199928349569 0.16375774149441003 0.9779477345203013 ['ENSG00000105193|ENST00000251453|RPS16'] 83639 20422 PVDTRERGLK True PC9_epitope_Rep5 1169.6516697846498 1169.6500349037901 83.588 3 -0.5588608478720448 0.16375774149441003 0.9779683757489869 ['ENSG00000274588|ENST00000611977|DGKK', 'DGKK|p.R206Efs*9|1|0.4|ENSG00000274588|chrX:50470064-50470064|G/-|frameshift_variant'] 138018 12356 YFWRIAWRFWR True NCI_RA007_Epitope_Rep2 1685.8731707244497 1685.87206993586 52.667 2 -0.5589650585333505 0.1638168159956247 0.9780210402046953 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 139373 7086 YLMEINWHLK True NCI_RA007_Epitope_Rep1 1345.68527841205 1345.68364490379 31.557 3 -0.5589663161189702 0.1638168159956247 0.9780216758669893 ['ENST00000373218.4_1_10:72183968-72184214:+|nuORF'] 17952 10733 EICEKEKKELK True NCI_RA007_Epitope_Rep2 1375.7381018305498 1375.7370099358602 46.35 2 -0.5589839092633024 0.1638249959787679 0.9780305688443607 ['ENSG00000182621|ENST00000338037|PLCB1', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1'] 75442 4312 NIYRLVTK True NCI_RA007_Epitope_Rep5 1005.5971150306499 1005.59600993586 23.18 2 -0.5589940830676584 0.1638249959787679 0.9780357117543649 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 95339 16399 RVRVKGGG True H1975_Epitope_Rep3 827.5089687325898 827.50786993586 68.552 2 -0.5590303514865611 0.1638249959787679 0.9780540471616144 ['ENSG00000105193|ENST00000251453|RPS16'] 60692 10095 LHNSANVP True PC9_epitope_Rep1 850.4297153523801 850.42860993586 43.702 2 -0.5590530810570233 0.16383581033262562 0.9780655392579342 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 100264 11247 SIYKEDETRK True NCI_RA007_Epitope_Rep2 1267.6408303174296 1267.63972993586 48.335 2 -0.5590706747134244 0.16383581033262562 0.978074435273404 ['ENSG00000215529|ENST00000400522|EFCAB8'] 41891 8387 ICWVDAEEK True H1975_Epitope_Rep3 1091.4957463068697 1091.49464993586 37.244 2 -0.5592305782137696 0.16389223964616004 0.9781553140102585 ['ENSG00000039319|ENST00000505560|ZFYVE16'] 135466 15131 WIEQSVFRQWF True PC9_epitope_Rep5 1524.75138382592 1524.74974490379 63.207 3 -0.5592316248761217 0.16389223964616004 0.9781558435592929 ['ENSG00000180346|ENST00000603357|TIGD2'] 2111 19501 AELHLSQWMP True PC9_epitope_Rep3 1210.58047899034 1210.57938993586 80.243 2 -0.5592426358310535 0.16389223964616004 0.9781614145664908 ['ENST00000590152.1_1_19:9267483-9267588:+|nuORF'] 4714 13600 ALCQLDQG True H1975_Epitope_Rep1 846.3905529623398 846.39000496793 57.441 1 -0.559262481954066 0.1639138615931424 0.9781714562796959 ['ENST00000476102.1_1_1:159898784-159904055:-|nuORF'] 102641 6291 SLWSRSLHFP True NCI_RA007_Epitope_Rep3 1228.6352914445201 1228.6336349037902 31.747 3 -0.559300586118252 0.1639138615931424 0.9781907381155776 ['ENST00000290650.8_1_15:43242534-43244580:-|nuORF'] 10714 6902 CRRLRRSP True NCI_RA007_Epitope_Rep5 1042.59304979306 1042.5919499358602 33.23 2 -0.5593069414850829 0.1639138615931424 0.9781939543676178 ['ENST00000607453.1_1_1:245133290-245134376:-|nuORF'] 120463 8671 VEERPCQSL True PC9_epitope_Rep1 1059.5018943164698 1059.5007899358602 38.192 2 -0.5593320363629446 0.1639138615931424 0.9782066547900595 ['IMPG2|p.I1076Ffs*25|1|0.53|ENSG00000081148|chr3:101232789-101232789|G/-|frameshift_variant', 'ENSG00000081148|ENST00000193391|IMPG2'] 33992 13627 GLSVSLGR True H1975_Epitope_Rep1 787.4552018242299 787.4546549679301 57.548 1 -0.5593557598020803 0.1639541989643305 0.9782186621439929 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 103184 20722 SPIFLGGV True PC9_epitope_Rep1 788.4432401581998 788.44214993586 84.532 2 -0.5593655802241198 0.1639541989643305 0.9782236329279226 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|79', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|79'] 43584 12292 IGSSILFMLA True H1975_Epitope_Rep3 1050.57835373202 1050.5772499358602 52.459 2 -0.5593764185306822 0.1639541989643305 0.9782291191271144 ['ENST00000526443.5_1_11:14535901-14541492:-|nuORF', 'ENST00000528307.5_1_11:14535901-14541893:-|nuORF'] 110236 5091 TEQYIQTMTWL True NCI_RA007_Epitope_Rep2 1412.66460253712 1412.66296490379 24.427 3 -0.5594550438799964 0.16401588858691282 0.9782689242661863 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 82781 23205 PRPFKRRWLLF True PC9_epitope_Rep4 1514.8986571962998 1514.89756993586 97.487 2 -0.559535703840191 0.16402933230412967 0.9783097704861043 ['ENST00000603928.2_2_9:136890984-136891107:+|nuORF'] 34063 18551 GLVQLMDRL True PC9_epitope_Rep3 1043.57975071435 1043.57864993586 76.575 2 -0.5595702867879064 0.16404013765156145 0.9783272866893165 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4'] 81933 11574 PLSRSAEL True PC9_epitope_Rep5 871.4763311916299 871.4752299358599 49.514 2 -0.5595803022636432 0.16404013765156145 0.9783323598883694 ['ENST00000498171.5_1_22:20077477-20097628:+|nuORF', 'nc|ENSG00000128191|Q8WYQ5-3|DGCR8', 'ENSG00000128191|ENST00000351989|DGCR8', 'ENST00000495826.5_1_22:20074657-20094820:+|nuORF'] 48732 10984 KDDKYWSRRRK True NCI_RA007_Epitope_Rep1 1536.8273427308397 1536.82624993586 46.719 2 -0.5596420039267281 0.1640535803302941 0.9783636177275136 ['HLF|p.A230S|1|0.11|ENSG00000108924|chr17:55320679-55320679|G/T|missense_variant'] 37407 8802 GVTALNCWL True H1975_Epitope_Rep3 975.48478770035 975.48368993586 38.863 2 -0.5596682323715491 0.16408046439080867 0.9783769068953699 ['ENST00000402650.1_1_6:71874941-71875379:+|nuORF'] 26708 18529 FIVHTIEEI True PC9_epitope_Rep4 1099.5913609438699 1099.59026993586 79.347 2 -0.5596683139843942 0.16408046439080867 0.9783769482479474 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 45136 9386 IPNAVEVSVP True H1975_Epitope_Rep3 1023.56006081559 1023.5589699358601 41.103 2 -0.5597700315826817 0.16412342621922787 0.9784284963326221 ['ENSG00000182580|ENST00000330394|EPHB3'] 40245 9668 HQIQNVVTV True PC9_epitope_Rep4 1036.5665431783598 1036.5654499358602 44.815 2 -0.5597786464959378 0.16412342621922787 0.9784328629521786 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF'] 44184 15481 IIYFCIWA True PC9_epitope_Rep1 1027.52011057991 1027.5190099358601 64.368 2 -0.5597992202800193 0.16413422732461852 0.9784432916271163 ['DSPP|p.T5I|1|0.1|ENSG00000152591|chr4:87610922-87610922|C/T|missense_variant'] 129528 16814 VRKSLGRG True H1975_Epitope_Rep1 871.5351834804299 871.53408993586 70.084 2 -0.5598107288263108 0.16413422732461852 0.9784491255128167 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 88942 5232 QVGQHIEVDP True H1975_Epitope_Rep3 1120.5512870370399 1120.55018993586 25.21 2 -0.5598730952840781 0.16416110619824745 0.9784807439267922 ['ENSG00000159459|ENST00000290650|UBR1', 'nc|ENSG00000159459|Q8IWV7-2|UBR1'] 70519 9998 LVWGPHKRRE True NCI_RA007_Epitope_Rep1 1276.7152731007202 1276.7141699358601 42.896 2 -0.5599060747970569 0.16416110619824745 0.9784974663583926 ['ENST00000438568.6_1_1:150479567-150479729:+|nuORF'] 5779 5222 APDEKYVAA True PC9_epitope_Rep2 962.4709114580199 962.46980993586 25.476 2 -0.5599381570366937 0.164190623191202 0.9785137355040421 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 131866 9497 VTREPLGLG True PC9_epitope_Rep1 940.5341804209198 940.53308993586 41.386 2 -0.560055602807917 0.1642522951267746 0.9785733071575836 ['RP1L1|p.V612G|1|0.12|ENSG00000183638|chr8:10612263-10612263|A/C|missense_variant'] 84984 11158 QEEWDYLDP True H1975_Epitope_Rep1 1193.4876837209697 1193.4865899358601 47.888 2 -0.5601403599611795 0.1642791684753774 0.9786163117859976 ['ENSG00000136870|ENST00000339664|ZNF189'] 94535 24662 RRRRWRRRRPA True NCI_RA007_Epitope_Rep5 1620.9886434559198 1620.9875499358602 102.35 2 -0.5601918646272273 0.1642791684753774 0.978642450020619 ['ENST00000556735.1_1_14:51134724-51134856:-|nuORF'] 112208 26749 TKKKILYKQYI True PC9_epitope_Rep1 1424.8755217098796 1424.87442993586 108.77 2 -0.5602224234079967 0.1643060400958184 0.9786579603112234 ['ENST00000437176.5_1_14:75936668-75936947:+|nuORF'] 37323 16867 GVSDVDYSL True PC9_epitope_Rep4 953.43419159613 953.43308993586 72.859 2 -0.5602238541881152 0.1643060400958184 0.9786586865473661 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 33075 10998 GINCHINV True PC9_epitope_Rep6 868.4225217969599 868.42142993586 53.196 2 -0.5603230787272759 0.1643597781528816 0.9787090586214169 ['ENSG00000184916|ENST00000331782|JAG2'] 121511 9664 VEYVVYTDDP True H1975_Epitope_Rep1 1198.5393849406598 1198.5382899358601 42.098 2 -0.5603232813298277 0.1643597781528816 0.9787091614894138 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 5764 5862 APASVPAQA True PC9_epitope_Rep4 810.4235673427798 810.42246993586 29.424 2 -0.5603263114473659 0.1643597781528816 0.9787106999874179 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 86 4684 AAANPWDPA True PC9_epitope_Rep5 911.4137309350699 911.41262993586 23.069 2 -0.5603443352141789 0.1643597781528816 0.9787198515787473 ['nc|ENSG00000137814|Q9NVX0-3|HAUS2', 'ENSG00000137814|ENST00000260372|HAUS2'] 86432 6142 QKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 30.645 3 -0.5604092403231566 0.1643705692285434 0.9787528112787703 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 90742 3945 RERPPEEVAA True NCI_RA007_Epitope_Rep2 1152.58873517492 1152.5870849037901 19.981 3 -0.5604416479749593 0.1643705692285434 0.9787692706825185 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 135190 6245 WERKYREWYEK True NCI_RA007_Epitope_Rep1 1671.8157749876298 1671.81357987172 28.325 4 -0.5604419847732326 0.16438135961034578 0.9787694417459578 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 126420 9958 VLKKKKKKKK True PC9_epitope_Rep5 1254.92274668582 1254.9211049037901 43.279 3 -0.5604736324955568 0.16438135961034578 0.9787855167117625 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 19560 5833 ELQEGPEKP True NCI_RA007_Epitope_Rep1 1025.5029398622898 1025.50184993586 26.742 2 -0.5604749142485984 0.16439479183411027 0.9787861677893874 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'DOK2|p.D205Tfs*3|1|0.4|ENSG00000147443|chr8:21910678-21910678|C/-|frameshift_variant', 'DOK2|p.A237Pfs*167|1|0.21|ENSG00000147443|chr8:21909829-21909841|CCTCTTCCAGGGC/-|frameshift_variant', 'ENSG00000147443|ENST00000276420|DOK2'] 130041 15836 VSAVQMLV True PC9_epitope_Rep1 845.4680750070498 845.46696993586 65.728 2 -0.5604993437725868 0.16439765329904363 0.9787985774419027 ['ENST00000607286.5_1_5:476364-477927:+|nuORF'] 63818 18873 LNILQNEGF True PC9_epitope_Rep5 1046.53965972418 1046.53856993586 77.614 2 -0.5605320587700903 0.16439765329904363 0.9788151973035046 ['ENST00000226067.9_1_17:53342389-53342698:+|nuORF'] 25561 10868 FEIYDPRNP True H1975_Epitope_Rep2 1149.5454733806098 1149.54436993586 46.833 2 -0.5605530031437985 0.16439765329904363 0.9788258382792132 ['ENST00000545000.1_1_5:64180068-64314145:+|nuORF', 'ENSG00000153015|ENST00000381070|CWC27'] 17071 9861 EGIDKGQLP True NCI_RA007_Epitope_Rep4 955.4974605590298 955.49636993586 44.778 2 -0.5605899946234014 0.16439765329904363 0.978844633690463 ['ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4'] 48830 8194 KDVENQLSP True H1975_Epitope_Rep3 1028.51383889916 1028.51274993586 36.498 2 -0.5606043339992526 0.16439765329904363 0.9788519200768265 ['ENSG00000174498|ENST00000327987|IGDCC3'] 82510 5544 PPRPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 26.331 2 -0.5606640499775293 0.16442715700141441 0.9788822672415174 ['ENSG00000142235|ENST00000600059|LMTK3', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'ENSG00000138439|ENST00000392238|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 7782 5262 ASSMKQVP True NCI_RA007_Epitope_Rep5 846.4269384710599 846.42584993586 26.936 2 -0.5607129143445441 0.16443794400334308 0.9789071035062131 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'HIP1|p.S43Kfs*4|1|0.05|ENSG00000127946|chr7:75599240-75599241|-/T|frameshift_variant', 'ENST00000485723.1_1_7:75283957-75368238:-|nuORF', 'ENST00000479835.1_1_7:75362785-75368238:-|nuORF'] 15154 3252 EAAERVESA True H1975_Epitope_Rep3 960.4512386425998 960.4501499358599 17.186 2 -0.560713073629878 0.16443794400334308 0.9789071844716388 ['nc|ENSG00000230487|Q96PY0|PSMG3-AS1', 'ENST00000437621.6_1_7:1626575-1627631:+|nuORF'] 82701 6350 PQVADLESL True NCI_RA007_Epitope_Rep1 970.49712620586 970.49602993586 28.726 2 -0.5607674360619435 0.16444608733385835 0.9789348192287701 ['nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-5|SPOCD1'] 16277 4910 EEFERIHQA True NCI_RA007_Epitope_Rep4 1157.54653600977 1157.54488490379 25.344 3 -0.5607704624585556 0.16444608733385835 0.9789363577985452 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 22792 5360 ETYWYLWRFTH True NCI_RA007_Epitope_Rep2 1600.7462984454799 1600.74409987172 25.468 4 -0.5607918224679851 0.16444608733385835 0.9789472172383699 ['ENSG00000198162|ENST00000356554|MAN1A2'] 115365 2778 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 15.179 3 -0.5608361353559871 0.16447558741281218 0.9789697479691634 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 117360 22607 TVPFLLLQ True PC9_epitope_Rep2 929.5586042636098 929.55750993586 92.458 2 -0.5608880778067563 0.16451586982723987 0.9789961613981563 ['nc|ENSG00000074416|Q99685-2|MGLL', 'nc|ENSG00000074416|Q99685|MGLL', 'ENSG00000074416|ENST00000265052|MGLL'] 19402 9266 ELLWGHRFEP True NCI_RA007_Epitope_Rep2 1282.6458561282202 1282.64474993586 40.653 2 -0.5608971850571715 0.16451586982723987 0.9790007929404755 ['ENSG00000182324|ENST00000342291|KCNJ14'] 67287 3721 LSRSVEDVRP True NCI_RA007_Epitope_Rep2 1156.6200353032 1156.61839490379 19.119 3 -0.5609165745322903 0.16451586982723987 0.979010653944625 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 53436 5405 KRDREKRDDQD True PC9_epitope_Rep1 1459.71276647107 1459.71112490379 25.623 3 -0.5610162599630126 0.16458564334956371 0.9790613595725322 ['nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B', 'nc|ENSG00000138709|Q659C4-3|LARP1B'] 20578 6011 EPRSKSSV True PC9_epitope_Rep4 888.46649478392 888.46538993586 30.098 2 -0.5610322681856658 0.16458564334956371 0.979069503510736 ['ENST00000494001.5_1_11:64503317-64504482:-|nuORF'] 91479 8093 RHRRPRYGERK True NCI_RA007_Epitope_Rep2 1509.8501438640894 1509.84850490379 36.113 3 -0.5610457227557124 0.16458564334956371 0.9790763485836511 ['ENST00000509770.1_1_5:82352905-82373233:-|nuORF'] 139403 15845 YLNVREAVL True PC9_epitope_Rep6 1075.60259433391 1075.6014899358602 73.219 2 -0.561050919376919 0.16458564334956371 0.979078992453018 ['ENSG00000128965|ENST00000617768|CHAC1'] 101309 10921 SLILREFTDCP True PC9_epitope_Rep2 1292.64347316972 1292.6423699358602 47.329 2 -0.561073793139276 0.16461513739354008 0.9790906302979371 ['ENST00000533146.5_1_15:40979267-40987285:-|nuORF'] 126944 12264 VLRGSRAFVV True PC9_epitope_Rep2 1102.66111226954 1102.6600099358602 52.484 2 -0.5611000110975795 0.16462856132795553 0.9791039704804428 ['ENST00000299563.4_1_11:74547841-74547952:+|nuORF'] 59918 8163 LGGMPNTSQVP True H1975_Epitope_Rep2 1099.53319444475 1099.53208993586 36.349 2 -0.5611217265580768 0.16463933925730723 0.9791150203998698 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 78882 12283 PAGAIAPLG True PC9_epitope_Rep6 765.43848913093 765.4379449679301 58.632 1 -0.5611413204119271 0.16463933925730723 0.9791249912740237 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 31942 16290 GENPLQVLV True H1975_Epitope_Rep1 967.5338460677499 967.53274993586 68.013 2 -0.561160587018036 0.1646527621557348 0.9791347961117707 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 89307 18172 QWGRKAKRPLN True NCI_RA007_Epitope_Rep4 1352.7789359864398 1352.7778299358602 78.639 2 -0.56120961083673 0.16469038208168643 0.9791597466791043 ['ENST00000360472.8_1_1:160183673-160183802:+|nuORF'] 103047 15710 SPFTVGVAA True PC9_epitope_Rep6 847.4439684341899 847.44286993586 72.645 2 -0.5612133158179451 0.16469038208168643 0.9791616324483624 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 105902 24165 SSRCGCKN True H1975_Epitope_Rep2 853.35345626097 853.35290496793 99.484 1 -0.5612175389088678 0.16469038208168643 0.9791637819478823 ['ENSG00000145794|ENST00000503335|MEGF10', 'nc|ENSG00000145794|Q96KG7-2|MEGF10'] 58950 9837 LETRTLHLS True PC9_epitope_Rep1 1068.5927579262 1068.5916699358602 42.699 2 -0.5612229993547595 0.16469038208168643 0.9791665612795271 ['SYTL5|p.Q492H|1|0.33|ENSG00000147041|chrX:38110362-38110362|G/T|missense_variant'] 115367 2911 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 15.855 3 -0.5612519319889826 0.16471193085055108 0.9791812884449083 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 58861 6544 LESVVDHP True H1975_Epitope_Rep3 894.4446967101799 894.44358993586 30.139 2 -0.5612720998549987 0.16471193085055108 0.9791915548414865 ['ENSG00000204186|ENST00000374423|ZDBF2'] 61844 6615 LLAVSLHG True NCI_RA007_Epitope_Rep1 808.48068829608 808.47958993586 29.743 2 -0.5612803105093942 0.16471193085055108 0.9791957346014417 ['MLT1A0_dup14514|chr11:77043130-77043424:-|1.355721760678524|0.4643796430535307|1.55|511.0|20|3|anti-sense'] 61687 9669 LKVLWCFLI True PC9_epitope_Rep5 1133.66710916677 1133.66545490379 42.158 3 -0.561281671990732 0.16471193085055108 0.979196427692779 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 104436 7043 SQLKKFYNQ True NCI_RA007_Epitope_Rep3 1154.6084079903399 1154.60730993586 34.822 2 -0.5612860136925454 0.16472535064183924 0.9791986379451821 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.L617Afs*13|1|0.14|ENSG00000151655|chr10:7734980-7735002|TCTCTAGACCACCACATTGTGAC/-|frameshift_variant'] 67805 14418 LTADGLYLY True H1975_Epitope_Rep2 1027.52261267771 1027.5215099358602 60.61 2 -0.5612886772814275 0.1647387700019279 0.979199993923914 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4'] 118475 20937 TYPNTYIF True PC9_epitope_Rep3 1017.48074786573 1017.4801749679301 85.811 1 -0.5613991941853415 0.16478432002570487 0.9792562637175856 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 17170 19346 EGRPPENKRS True PC9_epitope_Rep3 1168.59488318452 1168.59322490379 79.636 3 -0.5614298966468733 0.16479773800726152 0.9792718986126706 ['ENST00000477448.1_1_6:107811820-107879187:+|nuORF', 'ENSG00000112320|ENST00000317357|SOBP'] 115368 2980 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 16.196 3 -0.5614616755568101 0.164859350651437 0.9792880828996728 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 102646 9242 SLWTLPDVL True NCI_RA007_Epitope_Rep2 1042.5698972233 1042.5688099358601 40.56 2 -0.5615986207906244 0.16493172690763053 0.979357840037365 ['ENSG00000103404|ENST00000219689|USP31'] 3156 12301 AGDLSAGF True PC9_epitope_Rep5 736.3391690124799 736.3386249679301 52.306 1 -0.5616195201675462 0.16493172690763053 0.979368487725906 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 56751 11165 LDLNPQNINK True NCI_RA007_Epitope_Rep2 1167.62478633047 1167.62368993586 48.012 2 -0.5616667379648538 0.16493172690763053 0.9793925458508771 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 129099 6913 VQPVWLEFP True H1975_Epitope_Rep3 1113.5858816406098 1113.58478993586 31.551 2 -0.5616859437362897 0.16494514144351094 0.9794023322014738 ['nc|ENSG00000142330|Q9HC96-7|CAPN10'] 92711 4463 RNSTEITHTIS True H1975_Epitope_Rep3 1257.6313282628898 1257.6302299358601 22.287 2 -0.5617589358854358 0.16496948281400578 0.9794395294122584 ['ENSG00000163285|ENST00000295452|GABRG1'] 120329 13255 VEECKKQLINT True H1975_Epitope_Rep1 1303.6805869544296 1303.6794899358601 56.083 2 -0.5617770270304976 0.16496948281400578 0.9794487497009818 ['FANCI|p.G153V|1|0.45|ENSG00000140525|chr15:89261833-89261833|G/T|missense_variant'] 129501 11231 VRKLPCFRKP True NCI_RA007_Epitope_Rep2 1242.73831704442 1242.73666490379 48.271 3 -0.561811151573422 0.16496948281400578 0.9794661425366822 ['ENSG00000188133|ENST00000342743|TMEM215'] 42541 5901 IEERNERLKE True H1975_Epitope_Rep2 1314.6891774921799 1314.68752490379 27.685 3 -0.561874314248531 0.16496948281400578 0.9794983391606489 ['ENST00000520274.1_1_5:159466162-159492069:+|nuORF', 'ENSG00000113312|ENST00000231238|TTC1'] 44797 10717 IMNYWFCLR True PC9_epitope_Rep5 1244.5834561958 1244.58181490379 46.213 3 -0.561912179869491 0.16496948281400578 0.9795176429413899 ['ENSG00000204703|ENST00000377173|OR2B3'] 59854 13689 LGFQKRWRK True PC9_epitope_Rep5 1217.71454482473 1217.7128849037902 57.682 3 -0.5619292542434123 0.16496948281400578 0.9795263479183081 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 102351 17332 SLSTYFKAL True PC9_epitope_Rep6 1028.5542471591598 1028.5531499358601 79.28 2 -0.561954404870892 0.16496948281400578 0.9795391709628207 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-3|ELOVL5', 'ENST00000485336.5_1_6:53155264-53213696:-|nuORF'] 67242 23136 LSRNRRTRRWY True NCI_RA007_Epitope_Rep4 1562.86545957506 1562.8643699358602 100.44 2 -0.561973125803095 0.16496948281400578 0.9795487162705131 ['ZNF200|p.T243S|1|0.2|ENSG00000010539|chr16:3224353-3224353|T/A|missense_variant'] 864 8660 ADFHFSSTL True NCI_RA007_Epitope_Rep4 1023.4661604307499 1023.46506993586 40.093 2 -0.561986064679828 0.16496948281400578 0.9795553136808002 ['ENST00000477418.2_1_1:27206170-27212721:-|nuORF', 'ENSG00000142751|ENST00000374135|GPN2'] 114873 8798 TQQSSLPPPPP True NCI_RA007_Epitope_Rep3 1147.5873381925899 1147.58569490379 41.695 3 -0.5620189958631958 0.164982894588908 0.9795721057832393 ['ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2'] 115374 3181 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 18.219 3 -0.5620862955558419 0.1650097168462811 0.9796064264593939 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 105207 27690 SRHGSRNPRSH True NCI_RA007_Epitope_Rep1 1289.64496169477 1289.64331490379 116.04 3 -0.5621099839868071 0.1650097168462811 0.9796185079199671 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant'] 78040 9862 NVSVVDLTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep1 1161.58120754576 1161.58010993586 42.364 2 -0.5621227404992468 0.16503388687245046 0.9796250141755836 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 115372 3275 TRKDKEESKKK True PC9_epitope_Rep4 1375.7783268497494 1375.77667490379 18.554 3 -0.5621290508804501 0.16503388687245046 0.9796282327466794 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 35584 15899 GTAGLLEQWLK True NCI_RA007_Epitope_Rep5 1214.66592286646 1214.66482993586 67.883 2 -0.5621455843077205 0.16503388687245046 0.9796366657130163 ['ENSG00000183624|ENST00000383463|HMCES'] 15956 6667 EDPPGEEDLPG True NCI_RA007_Epitope_Rep2 1153.47751296009 1153.47586490379 30.545 3 -0.562172794497162 0.16504464572493094 0.979650545028079 ['ENSG00000107159|ENST00000378357|CA9', 'CA9|p.P207Lfs*4|1|0.4|ENSG00000107159|chr9:35676078-35676078|C/-|frameshift_variant'] 105208 27756 SRHGSRNPRSH True NCI_RA007_Epitope_Rep1 1289.64496169477 1289.64331490379 116.42 3 -0.5621745495614643 0.16504464572493094 0.9796514402733218 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant'] 51040 17044 KKKKKKKKQ True PC9_epitope_Rep5 1170.8288463009799 1170.82720490379 70.578 3 -0.5621785050489424 0.16505805456968958 0.979653457949486 ['ENSG00000147649|ENST00000336273|MTDH', 'LAPTM4B-MTDH|1|fusion', 'LAPTM4B-MTDH|3|fusion'] 86437 6579 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 34.011 3 -0.5621967575971178 0.16507426736250502 0.9796627686959141 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 105209 27826 SRHGSRNPRSH True NCI_RA007_Epitope_Rep1 1289.64496169477 1289.64331490379 116.82 3 -0.5622425133242611 0.16507426736250502 0.9796861104660902 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant'] 30629 5035 GAKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 24.21 3 -0.5622517471620505 0.16507426736250502 0.9796908212575518 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 61339 9830 LISFAQWQFWD True H1975_Epitope_Rep1 1439.6873865870298 1439.68628993586 42.74 2 -0.5622715248265174 0.16507426736250502 0.9797009114360777 ['ENST00000461449.5_1_1:111662535-111662574:-|nuORF'] 81379 20860 PLDPTLVPACL True PC9_epitope_Rep5 1137.61038213629 1137.60928993586 85.29 2 -0.5623004851637758 0.16507426736250502 0.9797156871287676 ['TMPRSS15|p.E419V|1|0.18|ENSG00000154646|chr21:18343976-18343976|T/A|missense_variant'] 4944 7102 ALGENGVIK True PC9_epitope_Rep4 899.5076313199099 899.50652993586 34.585 2 -0.5623388532867245 0.16507426736250502 0.9797352639740169 ['ENST00000496004.5_1_7:151188088-151217094:-|nuORF'] 106380 18693 STIEEDLKKLI True PC9_epitope_Rep6 1287.7285826926698 1287.7274899358601 84.545 2 -0.562395769962401 0.16508237258743055 0.979764307590737 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 130486 17076 VSPRGRGP True NCI_RA007_Epitope_Rep2 824.461684187 824.46058993586 71.159 2 -0.5624049985849529 0.16508237258743055 0.9797690170912423 ['ENST00000375412.9_2_9:96214723-96215017:-|nuORF'] 86950 20363 QLVPEAPRRVT True PC9_epitope_Rep6 1264.7251690780797 1264.7240699358601 91.024 2 -0.5624114901697393 0.16508237258743055 0.9797723298897181 ['ENSG00000126467|ENST00000246801|TSKS'] 45219 7326 IPSLSCWAL True PC9_epitope_Rep5 988.50518879176 988.50408993586 33.139 2 -0.5624665166421565 0.16512789222691437 0.9798004126960786 ['nc|ENSG00000112038|P35372-3|OPRM1'] 126589 9398 VLLVSPELQA True NCI_RA007_Epitope_Rep2 1067.62266107215 1067.6215699358602 41.165 2 -0.5625182943681775 0.1651412973667309 0.9798268400644571 ['nc|ENSG00000140284|O14975-2|SLC27A2', 'ENSG00000140284|ENST00000267842|SLC27A2'] 97000 4067 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 20.763 2 -0.5625521958586087 0.16515470207607458 0.9798441447221893 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 62169 8055 LLELYEEDPEE True PC9_epitope_Rep1 1377.6187574601702 1377.61766993586 35.805 2 -0.5625997355487189 0.16516545445787775 0.9798684125968888 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 42240 9644 IDSSFIVLEA True H1975_Epitope_Rep3 1092.5702911461199 1092.56918993586 42.112 2 -0.5626253682085371 0.16516545445787775 0.979881498290651 ['VPS13A|p.I1729S|1|0.34|ENSG00000197969|chr9:77318464-77318464|T/G|missense_variant'] 83355 11719 PTFTYKAAHI True PC9_epitope_Rep1 1147.6025943339098 1147.60093490379 49.952 3 -0.5626582646641025 0.1651788581337101 0.9798982930609018 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000599648.1_1_19:7705628-7705700:+|nuORF'] 61713 5056 LLAAHDEQKK True NCI_RA007_Epitope_Rep5 1151.62987171091 1151.62822490379 26.147 3 -0.5626754727623543 0.16520831660913543 0.9799070787617035 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6', 'SOX6|p.I335Nfs*2|1|0.13|ENSG00000110693|chr11:16096093-16096094|-/T|frameshift_variant', 'SOX6|p.Q204H|1|0.34|ENSG00000110693|chr11:16186879-16186879|C/A|missense_variant', 'SOX5|p.L429Sfs*9|1|0.71|ENSG00000134532|chr12:23575718-23575718|G/-|frameshift_variant', 'nc|ENSG00000134532|P35711-4|SOX5', 'nc|ENSG00000134532|P35711-2|SOX5', 'nc|ENSG00000134532|P35711-5|SOX5', 'ENSG00000134532|ENST00000451604|SOX5'] 76309 6413 NPQQFEKKI True NCI_RA007_Epitope_Rep2 1130.6084079903399 1130.60730993586 29.553 2 -0.5626991040729576 0.1652190665789009 0.9799191442902736 ['ENST00000526480.1_1_11:33157665-33182871:-|nuORF'] 130487 16174 VSPRGRGP True NCI_RA007_Epitope_Rep4 824.461684187 824.46058993586 70.145 2 -0.562736455615754 0.1652190665789009 0.9799382159858034 ['ENST00000375412.9_2_9:96214723-96215017:-|nuORF'] 60038 16392 LGKVEEAL True PC9_epitope_Rep4 857.4858332461698 857.48472993586 71.013 2 -0.5628520491838034 0.16523246853326484 0.9799972454735616 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3'] 67770 14081 LSYRKISV True PC9_epitope_Rep2 964.5705659296399 964.56946993586 59.438 2 -0.562892745445022 0.16524321720982502 0.9800180302025385 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant'] 82303 5756 PPHPPPPPP True PC9_epitope_Rep3 931.49158733295 931.49048993586 27.212 2 -0.5629181350761837 0.16524321720982502 0.9800309980767933 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 17630 13150 EHIQAPKTV True PC9_epitope_Rep5 1021.5556441414899 1021.55454993586 55.586 2 -0.5630488540502357 0.1653663391767803 0.9800977714011407 ['ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 140457 21489 YRHRRKYF True PC9_epitope_Rep2 1224.6628436050398 1224.6617499358601 88.128 2 -0.5630669319462663 0.1653663391767803 0.9801070069072306 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 15655 10811 EATEKEQLI True PC9_epitope_Rep4 1059.54480467427 1059.54370993586 49.344 2 -0.5630771198484524 0.1653957908593261 0.9801122117377938 ['FMO4|p.S512Yfs*4|1|0.05|ENSG00000076258|chr1:171341697-171341697|C/-|frameshift_variant', 'ENSG00000076258|ENST00000367749|FMO4', 'ENST00000480136.1_1_1:171303670-171311201:+|nuORF'] 66308 7635 LSFRWRENRCY True H1975_Epitope_Rep1 1528.7357508451198 1528.73464993586 34.353 2 -0.5631681928977998 0.1654225860823501 0.9801587428567874 ['ENST00000563604.1_1_15:43017281-43017455:-|nuORF'] 14468 8655 DTEYKVTVTP True H1975_Epitope_Rep3 1151.5710194221099 1151.56992993586 38.287 2 -0.5632065025072849 0.1654225860823501 0.9801783178312264 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'COL14A1|p.R971Sfs*29|1|0.42|ENSG00000187955|chr8:120262910-120262910|G/-|frameshift_variant', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 42236 7066 IDSRVQEY True PC9_epitope_Rep2 1008.4876241513198 1008.48652993586 32.577 2 -0.563239587529662 0.1654306719316832 0.980195224047508 ['ENSG00000149346|ENST00000334534|SLX4IP'] 46064 13547 ISGQIVLAGDP True PC9_epitope_Rep2 1068.5815245361598 1068.5804299358601 57.402 2 -0.5632584969690726 0.1654306719316832 0.980204886983652 ['nc|ENSG00000073146|Q9BXT6-5|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-2|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-4|MOV10L1', 'ENSG00000073146|ENST00000262794|MOV10L1'] 83990 17147 PVSPRGMVT True PC9_epitope_Rep4 942.49568673722 942.49458993586 73.963 2 -0.563261989918858 0.1654306719316832 0.9802066719474416 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A'] 85582 11279 QGGFVRGRVP True PC9_epitope_Rep3 1071.5937609857099 1071.5926699358602 48.392 2 -0.5632910378678379 0.16543344622249329 0.9802215163278727 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 45174 11665 IPQDALPP True H1975_Epitope_Rep3 849.45961849833 849.45852993586 50.004 2 -0.5633165154366183 0.16543344622249329 0.9802345366110383 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 98036 24787 SEQIVLIGSKT True PC9_epitope_Rep5 1173.66050313285 1173.65884490379 100.49 3 -0.5633166205727479 0.16543344622249329 0.9802345903416527 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 88519 7435 QSYTQADEDP True NCI_RA007_Epitope_Rep1 1152.4571118686797 1152.45600993586 32.918 2 -0.5633504908709677 0.16543344622249329 0.9802519004008289 ['ENSG00000083168|ENST00000265713|KAT6A'] 64625 5558 LPTEDPTMER True H1975_Epitope_Rep2 1187.54923843171 1187.54758490379 26.387 3 -0.5633897127980247 0.16543344622249329 0.9802719464654136 ['nc|ENSG00000049759|Q96PU5-3|NEDD4L', 'nc|ENSG00000049759|Q96PU5-2|NEDD4L', 'nc|ENSG00000049759|Q96PU5-6|NEDD4L', 'nc|ENSG00000049759|Q96PU5-5|NEDD4L', 'nc|ENSG00000049759|Q96PU5-7|NEDD4L', 'ENSG00000049759|ENST00000400345|NEDD4L'] 57093 9826 LDSPDSGLPP True H1975_Epitope_Rep1 996.47639076128 996.47528993586 42.724 2 -0.5634128686536533 0.16545758032934227 0.9802837817421018 ['nc|ENSG00000183688|Q8N5W9|RFLNB', 'ENSG00000178882|ENST00000546355|RFLNA'] 88650 17731 QTELVMFILFR True NCI_RA007_Epitope_Rep2 1395.75844335231 1395.75734993586 73.711 2 -0.5634186335966989 0.16545758032934227 0.9802867283380071 ['XPO5|p.L158F|1|0.22|ENSG00000124571|chr6:43570649-43570649|C/A|missense_variant'] 65626 21814 LSAEYEKVELP True PC9_epitope_Rep1 1276.6550833992399 1276.6539899358602 88.717 2 -0.5634250845043989 0.16545758032934227 0.9802900255717799 ['nc|ENSG00000131016|Q02952-3|AKAP12', 'nc|ENSG00000131016|Q02952-2|AKAP12', 'ENSG00000131016|ENST00000402676|AKAP12'] 94880 22257 RTARERRWP True PC9_epitope_Rep2 1226.6744709178997 1226.6733699358601 91.091 2 -0.5634961075674014 0.165470974368851 0.9803263291385442 ['ENST00000230538.11_1_6:112575672-112575810:-|nuORF'] 121594 16787 VFFFNFFF True PC9_epitope_Rep5 1113.5323895157699 1113.53128993586 69.577 2 -0.5635215611848029 0.16548436797842975 0.980339340571462 ['ENST00000446464.7_1_2:85584040-85584214:+|nuORF'] 63710 20034 LNANTGLTL True PC9_epitope_Rep5 915.50254593947 915.50144993586 82.112 2 -0.5636365426327238 0.16551381020398337 0.9803981219247785 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant'] 8792 9797 AVDPSGLAAA True PC9_epitope_Rep4 870.4446967101799 870.44358993586 45.325 2 -0.5636973358366013 0.16555664328930686 0.9804292040465171 ['DEPTOR|p.P360L|1|0.45|ENSG00000155792|chr8:120009111-120009111|C/T|missense_variant'] 66842 7294 LSMSVTAYNR True H1975_Epitope_Rep3 1140.55974354576 1140.55864993586 33.031 2 -0.5637259841185237 0.16555664328930686 0.9804438519590503 ['ENST00000502555.5_1_17:48244836-48246708:+|nuORF'] 73531 7816 MVNYNPETV True PC9_epitope_Rep4 1065.48009624273 1065.47898993586 37.467 2 -0.5638193849040969 0.16559947362508626 0.9804916110587701 ['ENSG00000084774|ENST00000264705|CAD'] 133838 11731 VYGGGAAEI True PC9_epitope_Rep2 835.4075829254699 835.40703496793 50.456 1 -0.5638436134343687 0.16559947362508626 0.9805040007181943 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 19359 16569 ELLLFEVAWE True PC9_epitope_Rep3 1247.64379043955 1247.64268993586 68.872 2 -0.5638640834523202 0.16562891164104374 0.9805144686384983 ['ENSG00000111713|ENST00000261195|GYS2'] 80470 4603 PGLEGLGPGP True NCI_RA007_Epitope_Rep3 892.4654321547598 892.46432993586 25.02 2 -0.5639068305141166 0.1656396431093138 0.9805363292448156 ['ENST00000546110.5_1_20:56190184-56195521:-|nuORF'] 115377 3815 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 21.209 3 -0.5639253960479371 0.1656396431093138 0.9805458238410627 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 127745 17724 VPATPESSLV True PC9_epitope_Rep4 998.5284263341399 998.5273299358599 76.199 2 -0.5639847589203716 0.16566907906349793 0.9805761837354933 ['ENST00000586120.5_1_19:11664849-11664891:-|nuORF'] 26379 15616 FHVDLEREL True PC9_epitope_Rep4 1156.58767254576 1156.58602490379 67.989 3 -0.5640364063277467 0.1656798087260707 0.9806025990920892 ['ENSG00000023330|ENST00000484952|ALAS1'] 58816 7944 LESPKKTICDP True NCI_RA007_Epitope_Rep2 1229.6325741328499 1229.6314699358602 35.531 2 -0.56404719129018 0.1656798087260707 0.9806081152791161 ['ENSG00000129675|ENST00000250617|ARHGEF6'] 91805 23016 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 94.982 2 -0.5641030190523769 0.16569319640564828 0.9806366703642604 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 130831 7981 VTASTAVAVT True PC9_epitope_Rep1 918.5022115863 918.50110993586 35.521 2 -0.5641216917613465 0.1657065836555896 0.9806462214935152 ['ENST00000280663.12_1_12:1909550-1953688:-|nuORF', 'nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-4|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-6|CACNA2D4', 'ENSG00000151062|ENST00000382722|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4'] 79296 16961 PAPVILAAP True PC9_epitope_Rep6 847.51673945163 847.51564993586 77.786 2 -0.5641850761465432 0.1657199704759154 0.9806786438661484 ['ENST00000377680.3_1_9:38621281-38621927:+|nuORF', 'ENST00000484285.2_1_9:38620779-38621927:+|nuORF'] 61945 13094 LLDKYFGSV True NCI_RA007_Epitope_Rep3 1040.5542471591598 1040.5531499358601 58.786 2 -0.5642541129952148 0.16576287502005455 0.9807139595017489 ['nc|ENSG00000182287|P56377|AP1S2', 'ENSG00000106367|ENST00000337619|AP1S1', 'ENSG00000182287|ENST00000672987|AP1S2', 'nc|ENSG00000182287|P56377-2|AP1S2', 'nc|ENSG00000106367|P61966-2|AP1S1', 'AP1S1|p.M119Ifs*21|1|0.2|ENSG00000106367|chr7:101159122-101159123|-/T|frameshift_variant'] 142206 8388 YVYMKRKY True H1975_Epitope_Rep3 1149.60048615893 1149.59938993586 37.247 2 -0.5642654492417601 0.16576287502005455 0.9807197587161495 ['nc|ENSG00000290708|Q7RTT3|SSX9P', 'ENSG00000187754|ENST00000298181|SSX7', 'ENSG00000165583|ENST00000347757|SSX5', 'nc|ENSG00000165583|O60225-2|SSX5', 'SSX7|p.M58I|1|0.18|ENSG00000187754|chrX:52652880-52652880|C/T|missense_variant', 'SSX3|p.G143Efs*11|1|0.62|ENSG00000165584|chrX:48350025-48350025|C/-|frameshift_variant', 'nc|ENSG00000165584|Q99909-2|SSX3', 'ENSG00000268447|ENST00000596480|SSX2B', 'ENSG00000241476|ENST00000337502|SSX2', 'ENSG00000165584|ENST00000298396|SSX3', 'nc|ENSG00000268447|Q16385-2|SSX2'] 39892 10332 HPEYAVSVLLR True H1975_Epitope_Rep1 1282.70337100434 1282.70173490379 44.689 3 -0.564296018496487 0.16576287502005455 0.9807353970954198 ['CON__P02769'] 108099 5397 SYCFKEKKCKK True NCI_RA007_Epitope_Rep1 1390.7101132608998 1390.70845490379 25.067 3 -0.5643549329239819 0.16576287502005455 0.980765537087935 ['nc|ENSG00000196159|Q6V0I7-2|FAT4'] 16008 9727 EDSNNNVP True PC9_epitope_Rep1 887.36208928503 887.36098993586 42.272 2 -0.564358557848514 0.16576287502005455 0.980767391603143 ['ENSG00000111727|ENST00000229330|HCFC2', 'nc|ENSG00000111727|Q9Y5Z7-2|HCFC2'] 84756 15993 QDTLAYATALL True H1975_Epitope_Rep1 1178.6183039677 1178.61777496793 66.851 1 -0.5643598731068259 0.16576287502005455 0.9807680644918779 ['ENSG00000162402|ENST00000294383|USP24'] 116789 10325 TVEAQGPLPTQ True NCI_RA007_Epitope_Rep5 1139.5822528121498 1139.5811499358601 46.346 2 -0.5643954798721784 0.16576287502005455 0.9807862812226149 ['ENST00000486390.1_1_1:16767709-16767853:+|nuORF'] 16744 5966 EESQRYYWRPK True PC9_epitope_Rep1 1540.7422756941999 1540.7406449037899 27.762 3 -0.5644053551390209 0.16576287502005455 0.980791333575837 ['nc|ENSG00000150776|Q6ZUT1-3|NKAPD1', 'nc|ENSG00000150776|Q6ZUT1|NKAPD1', 'ENSG00000150776|ENST00000393047|NKAPD1', 'ENST00000530104.2_1_11:111946298-111951307:+|nuORF'] 56967 14479 LDQYHLYL True PC9_epitope_Rep4 1063.5338460677501 1063.53274993586 63.603 2 -0.5644378622427653 0.16577625900434775 0.9808079650015623 ['nc|ENSG00000142197|Q9Y3R5-2|DOP1B', 'ENSG00000142197|ENST00000691173|DOP1B'] 98596 8735 SFSQSRYSV True PC9_epitope_Rep1 1059.4985231881901 1059.49742993586 38.437 2 -0.564520430913138 0.1658056856831162 0.9808502107589 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 21459 13011 ERKYYYYERHR True H1975_Epitope_Rep1 1661.80627293309 1661.80516993586 55.129 2 -0.5646020827805311 0.16585115428424752 0.9808919895891217 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 138015 9806 YFWNIRAYRFF True PC9_epitope_Rep2 1581.7881036878096 1581.7864649037901 43.056 3 -0.5647207378371812 0.1659287066448487 0.9809527053286988 ['ENST00000471538.1_1_1:16200000-16200039:+|nuORF'] 11984 21283 DHPQDHELIDP True PC9_epitope_Rep3 1314.5840437173001 1314.5829499358601 87.16 2 -0.564793869369224 0.16594208710997033 0.9809901285649232 ['nc|ENSG00000138036|Q8TCX1-2|DYNC2LI1'] 125717 13322 VKRKVIIFLK True NCI_RA007_Epitope_Rep2 1242.8539984196598 1242.85234490379 56.457 3 -0.5649283953889073 0.16598755133470225 0.9810589721608479 ['ENSG00000140471|ENST00000314742|LINS1', 'nc|ENSG00000140471|Q8NG48-3|LINS1', 'ENST00000559149.5_1_15:101113500-101121059:-|nuORF', 'nc|ENSG00000140471|Q8NG48-2|LINS1'] 130419 17439 VSLTGKILP True PC9_epitope_Rep2 926.58006798418 926.57896993586 72.332 2 -0.5649749283716248 0.16601697226366363 0.9810827862605327 ['SAFB2-LONP1|1|fusion', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5692045-5696439:-|nuORF', 'nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1'] 128599 15784 VPTSFSAQQI True PC9_epitope_Rep1 1076.55022440788 1076.54912993586 65.53 2 -0.565124220618714 0.16604639224870865 0.9811591918536392 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462'] 58271 16404 LELRKRREHLS True NCI_RA007_Epitope_Rep2 1435.83717913855 1435.8360899358602 68.536 2 -0.5651895931389082 0.16605444250172438 0.9811926496091968 ['ANKRD13C|p.S371L|1|0.62|ENSG00000118454|chr1:70292491-70292491|G/A|missense_variant'] 83622 11191 PVDNLVIK True NCI_RA007_Epitope_Rep1 896.53311779176 896.53256496793 47.531 1 -0.5651908933992593 0.16605444250172438 0.9811933150900147 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 118993 7617 VAEPLKTHHSI True PC9_epitope_Rep4 1230.6720708760602 1230.67042490379 36.681 3 -0.5652022117946126 0.16605444250172438 0.9811991079193068 ['ENST00000520838.1_1_5:138080350-138088780:-|nuORF'] 948 9834 ADSAGLLPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43833496793 45.755 1 -0.5652320497715484 0.16611594109909852 0.9812143792642739 ['ENST00000368324.4_1_1:155854169-155854304:+|nuORF'] 77177 13742 NRRRRRDWFWR True H1975_Epitope_Rep1 1702.9141411029796 1702.91304993586 57.998 2 -0.5652455906864741 0.1661293168439119 0.9812213096591006 ['ENST00000361972.8_1_10:7212945-7217999:-|nuORF'] 81968 15961 PLTLSPAAPA True PC9_epitope_Rep4 936.5280324113198 936.52692993586 69.322 2 -0.5653504808384603 0.16613736246110417 0.9812749942384786 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 125270 15542 VILPFFFP True PC9_epitope_Rep1 978.5578759876199 978.55676993586 64.607 2 -0.5653592386006948 0.16613736246110417 0.9812794766534555 ['ENST00000475385.1_1_13:29275636-29278315:-|nuORF'] 11571 6129 DFWTQQQK True NCI_RA007_Epitope_Rep2 1079.50360856863 1079.5025099358602 28.448 2 -0.565387924559211 0.16613736246110417 0.9812941587945765 ['ENST00000513392.1_1_5:56873683-56910006:+|nuORF'] 123503 8703 VGPGVSEFIQP True NCI_RA007_Epitope_Rep1 1128.5815245361598 1128.5804299358601 37.855 2 -0.565507719484711 0.166158781074579 0.9813554731129424 ['ENSG00000176473|ENST00000402312|WDR25'] 113127 21403 TLPDLVPQL True PC9_epitope_Rep4 994.5698972232999 994.56880993586 90.497 2 -0.5655185722984131 0.166158781074579 0.9813610279074655 ['ENSG00000163811|ENST00000407426|WDR43'] 36180 22117 GVAVMKLFNKA True PC9_epitope_Rep5 1176.66890007192 1176.66780993586 90.107 2 -0.5655426587722984 0.166158781074579 0.9813733560949495 ['ENSG00000183856|ENST00000361170|IQGAP3'] 60228 20708 LGQEQPQAV True PC9_epitope_Rep1 968.4927095317598 968.49160993586 84.479 2 -0.5655929937802963 0.166158781074579 0.9813991191067454 ['nc|ENSG00000180316|Q8N8W4-2|PNPLA1', 'nc|ENSG00000180316|Q8N8W4-3|PNPLA1', 'nc|ENSG00000180316|Q8N8W4|PNPLA1', 'ENSG00000180316|ENST00000636260|PNPLA1'] 126030 14139 VLDVVERSL True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 66.256 2 -0.565713660389813 0.16620156530664615 0.9814608799647432 ['ENST00000371206.6_1_10:97583001-97605437:+|nuORF', 'nc|ENSG00000138185|P49961-3|ENTPD1', 'nc|ENSG00000138185|P49961-4|ENTPD1', 'nc|ENSG00000138185|P49961-5|ENTPD1', 'ENSG00000138185|ENST00000371205|ENTPD1', 'nc|ENSG00000138185|P49961-2|ENTPD1', 'nc|ENSG00000138185|P49961-6|ENTPD1', 'ENST00000490659.5_1_10:97583001-97604470:+|nuORF'] 31000 16475 GASILREAAAI True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 71.342 2 -0.565785940223512 0.16620156530664615 0.9814978747978443 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS'] 111726 9987 TIGSFLDSTSP True PC9_epitope_Rep1 1123.53971929383 1123.5386299358602 43.279 2 -0.5658048476507821 0.1662149375330778 0.9815075521039291 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 140450 25169 YRHRRKYF True H1975_Epitope_Rep3 1224.6628436050398 1224.6617499358601 104.7 2 -0.5658242361719068 0.16622830933059626 0.9815174756240054 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 121784 6429 VFPAGRPA True NCI_RA007_Epitope_Rep2 813.4497225209699 813.44862993586 29.614 2 -0.5658750215046134 0.16624168069922218 0.9815434686792442 ['ENST00000564834.1_1_7:152161469-152161961:+|nuORF'] 132917 7109 VVMIKREWP True NCI_RA007_Epitope_Rep1 1156.64268532408 1156.64158993586 31.643 2 -0.565969798186079 0.16626842214987891 0.9815919768933894 ['XPO5|p.E122V|1|0.29|ENSG00000124571|chr6:43570930-43570930|T/A|missense_variant'] 105818 6801 SSLEKIVP True H1975_Epitope_Rep2 871.5014833103099 871.50038993586 31.078 2 -0.5659754195563598 0.16626842214987891 0.9815948539720167 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 19937 16438 ELVITWETVP True PC9_epitope_Rep1 1185.6281403754099 1185.6270499358602 68.052 2 -0.5660743324387978 0.16627912570759634 0.9816454780464545 ['ENSG00000144619|ENST00000418658|CNTN4', 'nc|ENSG00000144619|Q8IWV2-3|CNTN4', 'nc|ENSG00000144619|Q8IWV2-4|CNTN4'] 76752 8251 NQVVSEAEKIV True H1975_Epitope_Rep1 1214.65066672514 1214.6495699358602 36.678 2 -0.5660980329166733 0.16627912570759634 0.9816576078695085 ['nc|ENSG00000164494|Q86YH6-2|PDSS2', 'ENSG00000164494|ENST00000369037|PDSS2'] 48645 18029 KAQTFVKAI True PC9_epitope_Rep4 1004.6018660579198 1004.60076993586 77.412 2 -0.5661262197725108 0.16629249518922387 0.981672033697823 ['ENST00000475972.1_1_3:136705553-136729062:+|nuORF', 'NCK1-IL20RB|1|fusion', 'ENSG00000174564|ENST00000329582|IL20RB', 'NCK1-IL20RB|4|fusion'] 61362 7241 LISTQALA True PC9_epitope_Rep2 815.4752685624699 815.47416993586 33.242 2 -0.5662208597851743 0.16635666869768784 0.981720468830659 ['ENSG00000157211|ENST00000530059|CDCP2'] 33501 7192 GLDEGALR True PC9_epitope_Rep1 829.4293809992099 829.42828993586 32.477 2 -0.566222637176444 0.16635666869768784 0.9817213784540814 ['ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENST00000482444.5_2_22:31477435-31483924:+|nuORF', 'ENST00000497697.5_1_22:31477435-31484100:+|nuORF', 'ENST00000475548.5_1_22:31477435-31484563:+|nuORF'] 71560 16321 MCACACMCTC True NCI_RA007_Epitope_Rep5 1038.25936447106 1038.2582699358602 69.534 2 -0.566274831217626 0.16635666869768784 0.9817480897646879 ['ENST00000544665.7_1_16:31343047-31343377:+|nuORF'] 82005 15227 PLVDALVVP True H1975_Epitope_Rep2 921.55351888317 921.55297496793 63.728 1 -0.5662925512689735 0.16635666869768784 0.9817571582226704 ['ENSG00000167720|ENST00000344595|SRR'] 67554 4279 LSTQVDPMMRL True NCI_RA007_Epitope_Rep3 1289.64717865117 1289.6455349037901 23.545 3 -0.5662938675787608 0.16635666869768784 0.9817578318581334 ['nc|ENSG00000104970|Q9H7L2|KIR3DX1'] 103243 13852 SPLGLAGL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 58.427 1 -0.566327749096204 0.16635666869768784 0.98177517095923 ['nc|ENSG00000197558|A2VEC9-2|SSPOP', 'nc|ENSG00000197558|A2VEC9|SSPOP'] 57305 7107 LEAAGDKF True PC9_epitope_Rep5 849.42323298961 849.42212993586 32.305 2 -0.5664223599043018 0.16637003543540654 0.9818235873532 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 23737 8381 EYFWRIAWRFW True NCI_RA007_Epitope_Rep1 1658.8146527888198 1658.8129949037898 36.603 3 -0.5664305235495825 0.166375398823171 0.9818277649410949 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 126069 14356 VLEGHVAYV True PC9_epitope_Rep3 985.5232813840499 985.52218993586 60.311 2 -0.5664569024261508 0.166375398823171 0.9818412637094356 ['ENSG00000188649|ENST00000646931|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-1|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-2|CC2D2B'] 64384 14458 LPLPPPQLSI True NCI_RA007_Epitope_Rep4 1073.6484818971699 1073.64738993586 62.965 2 -0.5664630048399497 0.166375398823171 0.9818443864509788 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 99723 12682 SIHVTVLQY True NCI_RA007_Epitope_Rep3 1058.5760452329 1058.57494993586 57.129 2 -0.5664830591123129 0.166375398823171 0.9818546486031825 ['ENSG00000110799|ENST00000261405|VWF'] 126878 12344 VLQKKSILKKK True NCI_RA007_Epitope_Rep5 1311.8965915076294 1311.89548993586 54.13 2 -0.5665515545780712 0.16638876418905918 0.9818896982287729 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 129098 6913 VQPVWLEFP True H1975_Epitope_Rep3 1113.5858816406098 1113.58478993586 31.551 2 -0.5666589992009333 0.16651168756212525 0.9819446757255889 ['nc|ENSG00000142330|Q9HC96-7|CAPN10'] 4646 12395 ALADGDLSVP True PC9_epitope_Rep2 956.48147614172 956.48036993586 52.987 2 -0.56665956594023 0.16651168756212525 0.9819449657067174 ['ENSG00000149654|ENST00000537909|CDH22'] 130867 10719 VTCWLQRWSRW True NCI_RA007_Epitope_Rep3 1519.75067263327 1519.74956993586 49.211 2 -0.5667144052665379 0.16654108216432867 0.9819730246316388 ['ENST00000228425.10_2_12:27786336-27786390:+|nuORF'] 45913 16666 ISEDLALIY True H1975_Epitope_Rep2 1035.54882742555 1035.54827496793 69.339 1 -0.5667647007969201 0.16655177389101752 0.9819987578277636 ['ENST00000332211.10_2_10:76990718-76990862:+|nuORF'] 39408 24544 HKRYKIQKKVR True NCI_RA007_Epitope_Rep5 1482.9259345732999 1482.92482993586 101.88 2 -0.566781908227969 0.16655177389101752 0.9820075616421435 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 580 8196 AARHHLPWSAP True PC9_epitope_Rep3 1241.6417738072898 1241.64013490379 36.505 3 -0.5668198152683753 0.1665651351438007 0.9820269556199612 ['ENST00000533465.1_1_11:65349377-65351970:+|nuORF'] 61228 7576 LIMDRAADP True NCI_RA007_Epitope_Rep1 1000.5011660404798 1000.50006993586 33.462 2 -0.5669100292126499 0.1667067442568813 0.9820731088695798 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 58114 16400 LEKIFQEDHYP True PC9_epitope_Rep1 1417.68778050985 1417.6866899358602 67.906 2 -0.5669357796318126 0.16672010259698622 0.9820862822141471 ['ENSG00000106410|ENST00000467773|NOBOX', 'nc|ENSG00000106410|O60393-2|NOBOX'] 39568 11569 HLGVPISI True H1975_Epitope_Rep3 834.4963383602201 834.49524993586 49.628 2 -0.5669684457149363 0.16674949103092288 0.9821029931285494 ['ENSG00000181004|ENST00000314218|BBS12'] 127971 11262 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48561496793 48.327 1 -0.5669907060770804 0.16675750192357014 0.9821143805984522 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 97151 9352 SDRREWLKWSR True H1975_Epitope_Rep1 1517.7851435656899 1517.7840499358601 40.881 2 -0.567020385552268 0.16675750192357014 0.9821295631054483 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant'] 105378 24443 SRRRRPYGRLR True PC9_epitope_Rep2 1471.8708793086698 1471.8697899358601 99.594 2 -0.567056212573407 0.16675750192357014 0.9821478899686794 ['ENSG00000108239|ENST00000225235|TBC1D12'] 106588 10532 STPEAAAQVVQ True H1975_Epitope_Rep3 1099.5509526838698 1099.5503749679299 45.577 1 -0.5670983990726126 0.16678154102617532 0.9821694693563338 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E325Rfs*6|1|0.5|ENSG00000254772|chr11:62560339-62560340|-/T|frameshift_variant'] 78902 14434 PAGGSFCLDP True PC9_epitope_Rep3 962.4167677101799 962.41566993586 60.625 2 -0.5671054672944357 0.16678154102617532 0.9821730848557425 ['ENST00000503734.1_1_17:48193554-48195689:-|nuORF', 'ENST00000508892.5_1_17:48190259-48195083:-|nuORF', 'ENSG00000167100|ENST00000330175|SAMD14', 'nc|ENSG00000167100|Q8IZD0-2|SAMD14'] 109553 12128 TDSPVLLQA True H1975_Epitope_Rep2 942.5022115863 942.50110993586 51.734 2 -0.5671155008637422 0.16678154102617532 0.9821782171430631 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant', 'NEB|p.D1129Rfs*3|1|0.2|ENSG00000183091|chr2:151678058-151678059|-/T|frameshift_variant', 'NEB|p.D542Ifs*15|1|0.43|ENSG00000183091|chr2:151695629-151695629|A/-|frameshift_variant', 'ENST00000489048.1_1_2:152547165-152552100:-|nuORF'] 19787 15310 ELSGSLLQSV True PC9_epitope_Rep6 1031.54989005471 1031.5487899358602 71.008 2 -0.5671435430829294 0.16679489645444637 0.9821925608709616 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2', 'ENST00000489952.5_1_11:64559674-64566943:-|nuORF'] 44174 13973 IIVMEYLAL True PC9_epitope_Rep2 1063.59875482343 1063.59764993586 59.021 2 -0.5672791371236673 0.16684030838769656 0.9822619137981958 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6'] 41859 9014 IAYFVFDL True PC9_epitope_Rep3 986.5113197180199 986.51022993586 39.616 2 -0.5673003582314481 0.16686969065555377 0.9822727672404983 ['ENST00000484268.1_1_7:48352666-48443694:+|nuORF'] 140478 19892 YRIREFRQTFR True PC9_epitope_Rep5 1570.84807817542 1570.84642490379 81.566 3 -0.5673755501228561 0.16693112788703499 0.9823112224327176 ['ENSG00000128271|ENST00000337539|ADORA2A'] 102233 6317 SLSFQSTQVP True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 29.293 2 -0.5674318304177233 0.1669578318080554 0.9823400043026421 ['ENSG00000144452|ENST00000272895|ABCA12'] 28927 12822 FTDMVWQP True PC9_epitope_Rep1 1022.4531532188998 1022.4520499358599 54.194 2 -0.567434067283435 0.1669578318080554 0.9823411482155663 ['ENST00000263856.8_1_2:86732031-86732436:-|nuORF'] 113988 13481 TPALANIP True PC9_epitope_Rep1 795.44905381463 795.44794993586 56.711 2 -0.5674490837862591 0.1669845340171488 0.982348827469251 ['ENST00000529140.1_1_11:43511716-43515451:+|nuORF'] 99655 14445 SIGCTPDTVAS True PC9_epitope_Rep1 1049.46992548185 1049.4688299358602 60.386 2 -0.5674502597502638 0.1669845340171488 0.9823494288389902 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 119529 5630 VASIETGLAA True NCI_RA007_Epitope_Rep4 930.5022115862998 930.50110993586 28.257 2 -0.5675057696619823 0.16701123451447986 0.9823778151320971 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8', 'nc|ENSG00000172943|Q9UPP1-5|PHF8', 'ENSG00000197724|ENST00000359246|PHF2'] 62529 10440 LLKAGAEV True PC9_epitope_Rep1 799.4803539429099 799.47924993586 45.045 2 -0.5675388399924008 0.16701123451447986 0.9823947258445328 ['ENST00000582618.1_1_18:21946774-21948319:-|nuORF', 'ENST00000582350.5_1_18:21927721-21957497:-|nuORF', 'ENSG00000141447|ENST00000319481|OSBPL1A'] 69977 12761 LVLNTQSLV True PC9_epitope_Rep1 985.5807962601699 985.57968993586 53.959 2 -0.5676325159300012 0.1670352564102564 0.9824426252371625 ['ENSG00000126838|ENST00000261336|PZP'] 100135 15935 SISWSEPAV True PC9_epitope_Rep4 974.4709114580198 974.46980993586 69.22 2 -0.5676531002376975 0.1670352564102564 0.9824531501552075 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 73290 15462 MTDGFQFEY True H1975_Epitope_Rep3 1136.44846176128 1136.44787496793 64.89 1 -0.5676807150006169 0.1670352564102564 0.9824672695301372 ['ENSG00000108821|ENST00000225964|COL1A1'] 120015 8973 VDRMGKSLP True H1975_Epitope_Rep3 1001.5328005219299 1001.53170993586 39.51 2 -0.5677879528930487 0.1670806557587218 0.9825220970925496 ['ENST00000549628.1_1_12:53492723-53495948:+|nuORF', 'ENSG00000167779|ENST00000301464|IGFBP6'] 43082 11834 IEVPNNQHVK True PC9_epitope_Rep3 1176.6251206836403 1176.62402993586 50.539 2 -0.5677980984874884 0.16709132573754468 0.9825272839883594 ['ENSG00000149418|ENST00000278742|ST14', 'ENST00000524718.5_1_11:130059967-130066600:+|nuORF'] 77293 10559 NSDNNLFTDT True PC9_epitope_Rep4 1139.4730962859899 1139.4719899358602 48.346 2 -0.5678208685330676 0.16709132573754468 0.9825389249292601 ['NBN|p.S537Vfs*9|1|0.31|ENSG00000104320|chr8:89953481-89953481|G/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 97355 12271 SEDFSPLSP True H1975_Epitope_Rep1 977.43419159613 977.43364496793 52.224 1 -0.5678378287364254 0.16712069739119287 0.9825475955095652 ['ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENST00000511829.5_1_5:79738958-79744113:+|nuORF'] 61213 17868 LILNDNLIP True H1975_Epitope_Rep1 1023.59644632431 1023.5953499358601 74.418 2 -0.5679063731940085 0.16723018988863073 0.9825826363181698 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.I755Sfs*38|1|0.15|ENSG00000121871|chr3:165188569-165188569|G/-|frameshift_variant'] 98829 16478 SGQRGPRAA True NCI_RA007_Epitope_Rep5 898.4733114998598 898.47220993586 70.142 2 -0.5679776141115332 0.16724353427555042 0.982619053468068 ['ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 123568 14884 VGPRRKLNEI True NCI_RA007_Epitope_Rep4 1180.70403971068 1180.70294993586 64.714 2 -0.5681139607956798 0.1672729020782925 0.9826887454392522 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 96547 2640 SAEAMDDFMKR True NCI_RA007_Epitope_Rep3 1299.55875756959 1299.55711490379 14.844 3 -0.5682088857348817 0.16732895369331838 0.9827372603263309 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3', 'RBM17-PFKFB3|1|fusion'] 57942 17491 LEGKRFLEL True PC9_epitope_Rep2 1103.6338944621898 1103.63278993586 72.535 2 -0.5682200308363354 0.16732895369331838 0.982742956175554 ['ENSG00000108262|ENST00000225394|GIT1', 'nc|ENSG00000108262|Q9Y2X7-3|GIT1', 'ENST00000473217.5_1_17:27901722-27902547:-|nuORF', 'BCAS3-GIT1|1|fusion'] 20384 6165 EPAEPSQETRR True NCI_RA007_Epitope_Rep1 1298.62149185518 1298.6203899358602 28.017 2 -0.5682963079765134 0.16732895369331838 0.982781937087248 ['SBF1|p.T96R|1|0.19|ENSG00000100241|chr22:50467683-50467683|G/C|missense_variant'] 42665 18227 IEHSQAFVL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 82.752 2 -0.5683470731561236 0.16735831824518113 0.9828078788091186 ['ENST00000356978.8_1_14:90871354-90871483:+|nuORF'] 19840 11943 ELSSLHSLLWE True NCI_RA007_Epitope_Rep1 1312.66631678928 1312.66520993586 50.441 2 -0.5683976601615489 0.16738231806966386 0.9828337282951067 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 12003 5911 DHRRYYHDHWR True H1975_Epitope_Rep1 1639.7504893924702 1639.74883490379 27.809 3 -0.5684000138559983 0.16738231806966386 0.9828349309819159 ['ENSG00000188070|ENST00000433688|ZFTA'] 8266 11895 ATHYTKKPHV True PC9_epitope_Rep6 1180.63529144452 1180.6336349037902 56.986 3 -0.5684071201926696 0.16738231806966386 0.982838562150103 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113943320-113958989:+|nuORF', 'ENST00000409656.5_1_2:113943320-113958989:+|nuORF', 'ENST00000487574.1_1_2:113953766-113955491:+|nuORF'] 71383 22528 LYSCFIVFVTI True PC9_epitope_Rep5 1303.6886324569898 1303.68752993586 91.658 2 -0.5684470691415912 0.16739565809500923 0.9828589746676824 ['nc|ENSG00000280055|Q8N9X5|LINC02912'] 101160 18782 SLGSLSLHAF True PC9_epitope_Rep5 1030.54474510462 1030.54364993586 77.258 2 -0.5685191968889359 0.16740356273228246 0.9828958275198562 ['ENST00000355068.4_1_17:7213473-7213746:+|nuORF'] 128180 11833 VPLSTGKVP True PC9_epitope_Rep2 896.5331177917599 896.53202993586 50.846 2 -0.5685643771789711 0.16740356273228246 0.9829189106131385 ['ENST00000257570.9_1_12:121458212-121458344:-|nuORF'] 120737 20304 VEKPLPEWP True PC9_epitope_Rep6 1093.58079626017 1093.5796899358602 90.807 2 -0.5685668010435598 0.16740356273228246 0.9829201489638085 ['nc|ENSG00000167524|Q96LW2|RSKR', 'ENSG00000167524|ENST00000301037|RSKR', 'nc|ENSG00000167524|Q96LW2-2|RSKR', 'nc|ENSG00000167524|Q96LW2-3|RSKR', 'ENSG00000258472|ENST00000531839|unknown'] 28249 5507 FRKKYELR True NCI_RA007_Epitope_Rep4 1138.6611122695397 1138.65946490379 27.774 3 -0.5685701273077286 0.16740356273228246 0.9829218483451736 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1'] 106327 15754 STFVSFLQKEK True H1975_Epitope_Rep3 1312.7027022979998 1312.70160993586 66.04 2 -0.5685777764814336 0.16740356273228246 0.9829257562717214 ['ENST00000592859.1_1_19:9869411-9879277:-|nuORF', 'ENST00000589453.5_1_19:9875628-9879277:-|nuORF'] 32827 8667 GHLKKYVP True PC9_epitope_Rep1 940.54943656224 940.54832993586 38.177 2 -0.5686259183845659 0.16740356273228246 0.9829503510930203 ['ENST00000370500.9_1_1:89323107-89325618:-|nuORF'] 74290 7759 NEKTDKERTFD True NCI_RA007_Epitope_Rep1 1381.6473722498497 1381.6462699358601 34.173 2 -0.568633216599623 0.16740356273228246 0.9829540795200867 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 71963 2816 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 14.96 2 -0.5686442648034974 0.16740356273228246 0.9829597236484376 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 47331 10135 IVFASYFLT True NCI_RA007_Epitope_Rep3 1059.5640835668698 1059.56298993586 46.955 2 -0.5687177272346482 0.16740356273228246 0.9829972514333594 ['TAS2R16|p.T237A|1|0.17|ENSG00000128519|chr7:122994926-122994926|T/C|missense_variant'] 80840 14351 PHREVPFFQ True PC9_epitope_Rep4 1155.5825275956697 1155.5808749037901 63.107 3 -0.568765323325496 0.16740885500096112 0.9830215641543443 ['ENST00000573802.1_1_16:2793706-2802586:-|nuORF'] 80668 11936 PGTHYRARVEV True NCI_RA007_Epitope_Rep1 1283.6734678583898 1283.6723699358602 50.414 2 -0.568778891012212 0.16740885500096112 0.9830284945045662 ['ENSG00000275793|ENST00000619918|RIMBP3', 'RIMBP3|p.Q1152Sfs*13|1|0.07|ENSG00000275793|chr22:18607981-18607981|G/-|frameshift_variant'] 39945 11354 HPIPLPSAA True PC9_epitope_Rep1 901.50215201665 901.50104993586 48.551 2 -0.56879814349977 0.16740885500096112 0.9830383284834178 ['nc|ENSG00000137090|Q9Y5R6-2|DMRT1', 'ENST00000564322.1_1_9:841703-894198:+|nuORF', 'ENSG00000137090|ENST00000382276|DMRT1', 'DMRT1|p.E144D|1|0.08|ENSG00000137090|chr9:847037-847037|G/C|missense_variant'] 60293 11619 LGSATATP True H1975_Epitope_Rep3 716.37046914076 716.36992496793 49.824 1 -0.5687987581200276 0.16740885500096112 0.9830386424222728 ['ENST00000471119.5_1_1:33546965-33585780:+|nuORF', 'ENST00000481886.5_1_1:33546965-33585780:+|nuORF'] 27031 13671 FLEYGFVSVHN True H1975_Epitope_Rep1 1310.62953735774 1310.62844993586 57.721 2 -0.5688653652394281 0.1674542280030114 0.9830726632212428 ['nc|ENSG00000185917|Q9NVD3-3|SETD4', 'ENSG00000185917|ENST00000332131|SETD4', 'nc|ENSG00000185917|Q9NVD3-4|SETD4'] 38744 5305 HGLLTPGG True NCI_RA007_Epitope_Rep4 750.4024379753799 750.40134993586 26.961 2 -0.5688877648628324 0.16746756367131188 0.983084103733964 ['nc|ENSG00000186684|Q4G0S4-1|CYP27C1', 'ENSG00000186684|ENST00000664447|CYP27C1', 'nc|ENSG00000186684|Q4G0S4|CYP27C1'] 110000 9961 TEINEVEVDP True H1975_Epitope_Rep2 1143.52954853295 1143.5284499358602 43.306 2 -0.5689728015562692 0.16749155094261048 0.9831275335389573 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'COL14A1|p.R971Sfs*29|1|0.42|ENSG00000187955|chr8:120262910-120262910|G/-|frameshift_variant', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF', 'ENST00000498051.6_1_8:121226287-121243878:+|nuORF'] 13675 6918 DPRNRRLYWFR True NCI_RA007_Epitope_Rep2 1577.8327624644496 1577.8311149037902 31.529 3 -0.5689980873769007 0.16749155094261048 0.9831404467578526 ['ENST00000408953.3_1_5:159826916-159827063:-|nuORF'] 57514 4354 LEDLSGHSVS True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 21.863 2 -0.5690150014476427 0.16749155094261048 0.9831490844224902 ['ENSG00000135837|ENST00000367607|CEP350'] 48314 21428 IYQYYFELAL True PC9_epitope_Rep4 1321.65944050369 1321.65834993586 90.599 2 -0.5690805953532628 0.16750220229038199 0.9831825804626072 ['ENST00000589950.1_1_17:43228002-43228083:-|nuORF'] 13356 8124 DLWARPGWRTR True NCI_RA007_Epitope_Rep2 1412.7425504777198 1412.7414499358601 36.233 2 -0.5691175322796279 0.16750220229038199 0.9832014416029743 ['ENST00000412023.5_1_12:6993021-6993087:+|nuORF', 'ENST00000433346.5_1_12:6993021-7014770:+|nuORF'] 32528 7952 GGGFADPRDAG True NCI_RA007_Epitope_Rep5 1018.4468219684999 1018.44572993586 37.276 2 -0.5691529865872762 0.16751285295577942 0.9832195449967588 ['ENST00000556029.5_2_12:98909542-98909698:+|nuORF'] 129770 23617 VRRGKKRVK True NCI_RA007_Epitope_Rep3 1125.75707834305 1125.75657496793 102.43 1 -0.5691825026845628 0.16751285295577942 0.9832346157618802 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 71516 7917 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.79936993586 35.429 2 -0.569297069433777 0.16758756546389275 0.9832931085373349 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 60011 12889 LGKESVAL True PC9_epitope_Rep4 815.4752685624699 815.47416993586 57.457 2 -0.5693193422741986 0.16758756546389275 0.9833044792553814 ['ENST00000593076.1_1_17:73910704-73911112:-|nuORF'] 136843 20735 YADKYTQTP True H1975_Epitope_Rep2 1085.50293986229 1085.50184993586 85.862 2 -0.5693596125824466 0.16761691223574632 0.9833250373461088 ['ENSG00000107771|ENST00000372088|CCSER2', 'ENST00000498300.5_1_10:86198319-86273265:+|nuORF', 'nc|ENSG00000107771|Q9H7U1-4|CCSER2', 'nc|ENSG00000107771|Q9H7U1|CCSER2'] 61113 26576 LIIIKDLLLLI True H1975_Epitope_Rep3 1278.8890465156999 1278.8874149037902 110.96 3 -0.5694771879105925 0.16762755837417123 0.9833850547481883 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 80351 12589 PGGLFGTSS True PC9_epitope_Rep1 821.39193286133 821.3913849679301 53.291 1 -0.5694783350986204 0.16762755837417123 0.9833856403031607 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 112460 6650 TLDGELDEKYK True NCI_RA007_Epitope_Rep1 1309.64016161109 1309.6385249037899 29.879 3 -0.5694958539881296 0.16763551925694611 0.9833945823145802 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107564398-107569844:-|nuORF'] 38505 14923 HERFRIVSWK True NCI_RA007_Epitope_Rep2 1356.74148784856 1356.74038993586 62.726 2 -0.5695001613803244 0.16763551925694611 0.9833967808723837 ['nc|ENSG00000140367|Q8WVN8-2|UBE2Q2', 'nc|ENSG00000140367|Q8WVN8-4|UBE2Q2', 'ENSG00000140367|ENST00000267938|UBE2Q2'] 94320 20778 RRRKRGRFHPG True H1975_Epitope_Rep2 1421.8340998771298 1421.83246490379 86.036 3 -0.569513051468053 0.16763551925694611 0.9834033601052813 ['ENSG00000170396|ENST00000302277|ZNF804A'] 69287 8694 LTTPWRRLERP True NCI_RA007_Epitope_Rep3 1423.80481638111 1423.80316490379 41.277 3 -0.5695289180004305 0.16768087627710343 0.9834114584184674 ['ENST00000354588.7_1_11:62437223-62439219:-|nuORF', 'ENST00000524759.1_1_11:62434908-62439219:-|nuORF', 'ENST00000431002.6_1_11:62438460-62439219:-|nuORF'] 139333 24697 YLLFLNWHN True PC9_epitope_Rep2 1218.61857875122 1218.61748993586 100.68 2 -0.5695640402313706 0.16769420468557336 0.9834293843804702 ['ENST00000354300.4_1_12:110973101-110973269:-|nuORF'] 92017 20845 RKRRGGGGGG True PC9_epitope_Rep6 956.5376430919196 956.53654993586 92.953 2 -0.5696074581082383 0.1677208602219411 0.9834515433789923 ['ENST00000605920.1_1_10:81586022-81586202:+|nuORF'] 65422 25232 LRFRRKRRHH True PC9_epitope_Rep2 1460.88138442272 1460.88087496793 102.72 1 -0.5696146877599616 0.1677208602219411 0.9834552330422133 ['ENSG00000145888|ENST00000274576|GLRA1', 'nc|ENSG00000145888|P23415|GLRA1'] 141214 5651 YTAEGRDVD True NCI_RA007_Epitope_Rep2 1024.44615326216 1024.4450499358602 26.596 2 -0.5696789488505201 0.16772613004979744 0.9834880274755944 ['ENSG00000142449|ENST00000600128|FBN3'] 59964 17439 LGGWTKDDDVP True PC9_epitope_Rep1 1201.5615173675699 1201.5604299358602 71.877 2 -0.5696955046558103 0.16772613004979744 0.9834964760356747 ['ENSG00000198682|ENST00000456849|PAPSS2', 'nc|ENSG00000198682|O95340|PAPSS2', 'PAPSS2|p.G541Wfs*26|1|0.67|ENSG00000198682|chr10:87745140-87745141|-/C|frameshift_variant', 'ENSG00000138801|ENST00000265174|PAPSS1'] 46229 3327 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 17.571 2 -0.569697768474078 0.16772613004979744 0.9834976312680507 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 61111 26966 LIIIKDLLLLI True H1975_Epitope_Rep2 1278.8890465156999 1278.8874149037902 111.27 3 -0.5697002208586984 0.16772613004979744 0.9834988827230075 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 135964 24901 WQGRRLAL True H1975_Epitope_Rep3 998.5773826455799 998.57628993586 103.59 2 -0.5697242267912831 0.1677394562397925 0.98351113279794 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 117168 6874 TVLEM[Oxidation]FNTL True PC9_epitope_Rep2 1082.53179784286 1082.5307099358602 31.842 2 -0.5697693595219903 0.16776879353134258 0.9835341628432993 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 126123 6543 VLEVKMQVEY True NCI_RA007_Epitope_Rep1 1236.64241054056 1236.6413099358601 29.465 2 -0.5697918111504179 0.1677821186115025 0.9835456188789486 ['nc|ENSG00000127054|Q5TA45-2|INTS11', 'nc|ENSG00000127054|Q5TA45-4|INTS11', 'nc|ENSG00000127054|Q5TA45-3|INTS11', 'ENSG00000127054|ENST00000435064|INTS11', 'nc|ENSG00000127054|Q5TA45-5|INTS11', 'ENST00000461514.6_1_1:1248044-1249114:-|nuORF', 'ENST00000478641.5_1_1:1248044-1248711:-|nuORF', 'ENST00000485710.5_1_1:1247522-1249186:-|nuORF', 'ENST00000470030.6_1_1:1247241-1248711:-|nuORF'] 19382 11229 ELLRWKEDP True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 48.182 2 -0.5698329533869061 0.167811454280545 0.9835666111118978 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'ENST00000606296.1_1_3:18393447-18393747:-|nuORF', 'ENST00000467628.1_1_3:18393447-18419817:-|nuORF'] 58671 23178 LERKRLQRV True PC9_epitope_Rep5 1196.746573229 1196.74546993586 94.135 2 -0.5698741608538025 0.16783541466538585 0.9835876356341844 ['ENSG00000234828|ENST00000636793|IQCM'] 16563 7463 EELSSAIFKH True NCI_RA007_Epitope_Rep2 1159.5873381925899 1159.58624993586 33.656 2 -0.5698787529979159 0.16783541466538585 0.983589978536956 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'nc|ENSG00000196535|Q92614-2|MYO18A', 'nc|ENSG00000196535|Q92614-5|MYO18A'] 25963 12147 FGAGLGGNVK True PC9_epitope_Rep4 918.49231560894 918.49120993586 54.54 2 -0.5698789468732532 0.16783541466538585 0.9835900774514932 ['ENSG00000262152|ENST00000573315|GREP1'] 79917 10271 PEQRELRPR True H1975_Epitope_Rep3 1179.6472531105499 1179.6461499358602 44.558 2 -0.5699019926119541 0.16786474760250397 0.983601835150943 ['ENSG00000109062|ENST00000262613|NHERF1'] 98786 7528 SGISTTFPK True NCI_RA007_Epitope_Rep1 936.4916469026 936.49054993586 33.274 2 -0.5699658147924425 0.16791008933431525 0.9836343949304781 ['ENSG00000153802|ENST00000283916|TMPRSS11D'] 3229 8237 AGEQLGFDY True H1975_Epitope_Rep3 998.4345259492998 998.43342993586 36.667 2 -0.5700390368461804 0.1679234106591102 0.9836717471925976 ['ENSG00000181090|ENST00000460843|EHMT1', 'ENST00000475704.2_1_9:140728608-140729402:+|nuORF', 'ENST00000475564.5_1_9:140711834-140729402:+|nuORF', 'ENST00000494249.5_1_9:140710377-140729402:+|nuORF'] 26132 18097 FGWFAMVIAYV True PC9_epitope_Rep6 1302.6471019981798 1302.64600993586 82.246 2 -0.5701209957228404 0.16798206995917714 0.9837135524762878 ['ENSG00000160233|ENST00000291592|LRRC3'] 30846 9490 GAPHEVAVE True PC9_epitope_Rep5 907.4399456829099 907.43884993586 41.46 2 -0.5701477456335168 0.16798206995917714 0.9837271960889229 ['ENSG00000103184|ENST00000251170|SEC14L5'] 13571 16261 DPEATQFIEY True H1975_Epitope_Rep2 1211.5346339133898 1211.53352993586 67.758 2 -0.5701503287842806 0.16799538949188358 0.9837285135845084 ['SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 61960 15870 LLDLSHNSL True PC9_epitope_Rep4 1010.5396597241801 1010.53856993586 68.974 2 -0.5702655041981761 0.16803803547416277 0.9837872528300746 ['ENSG00000168140|ENST00000304735|VASN'] 96662 2627 SAIRHEEKSP True NCI_RA007_Epitope_Rep5 1152.5887351749197 1152.5876299358601 14.792 2 -0.570279325744272 0.16803803547416277 0.9837943012412766 ['EPB41L3|p.G501E|1|0.1|ENSG00000082397|chr18:5419715-5419715|C/T|missense_variant'] 88958 19211 QVIASFKVL True PC9_epitope_Rep5 1003.6066170851899 1003.60552993586 78.934 2 -0.5702979023085125 0.16806736141126 0.9838037743257516 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF'] 94423 22463 RRRRPRLPA True PC9_epitope_Rep2 1176.74282526124 1176.7417299358601 91.893 2 -0.5703575902602933 0.16807260736638227 0.9838342106257568 ['nc|ENSG00000286025|P0DSO1|FAM246C'] 3375 8177 AGHHELAER True PC9_epitope_Rep4 1018.49444086726 1018.49334993586 38.911 2 -0.5704008411392747 0.16807260736638227 0.9838562638739012 ['ENSG00000108262|ENST00000225394|GIT1', 'nc|ENSG00000108262|Q9Y2X7-3|GIT1', 'ENST00000579536.1_1_17:27908354-27909910:-|nuORF'] 88352 19761 QSIPSTVTV True PC9_epitope_Rep5 930.5022115863001 930.5016649679301 81.054 1 -0.5704232331012207 0.16807260736638227 0.9838676808766382 ['ENSG00000091009|ENST00000265271|RBM27'] 53335 6273 KQMTRRFSADE True H1975_Epitope_Rep1 1367.6615828453498 1367.6604899358601 29.196 2 -0.570479036977513 0.16807260736638227 0.983896132245438 ['ENSG00000044446|ENST00000379942|PHKA2', 'PHKA2|p.Q1025Pfs*38|1|0.65|ENSG00000044446|chrX:18899215-18899216|-/A|frameshift_variant', 'ENST00000473739.5_1_X:18912213-18919671:-|nuORF'] 26457 12604 FIDGHFVEM True NCI_RA007_Epitope_Rep5 1093.4902670036101 1093.4891699358602 55.134 2 -0.5705331432106503 0.1680832332933173 0.9839237161780313 ['KIAA0232|p.G888Dfs*33|1|0.26|ENSG00000170871|chr4:6863043-6863043|G/-|frameshift_variant', 'ENSG00000170871|ENST00000307659|KIAA0232'] 126419 6607 VLKKKKKKKK True PC9_epitope_Rep5 1254.92274668582 1254.9211049037901 30.386 3 -0.5705339122334264 0.1680832332933173 0.9839241082204664 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 19573 15402 ELQFRLGP True PC9_epitope_Rep2 958.5236157372199 958.52250993586 64.525 2 -0.5706459136063289 0.16810986443011028 0.9839812016534025 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL', 'AGL|p.W208Rfs*10|1|0.07|ENSG00000162688|chr1:99864546-99864547|-/AGACCAC|frameshift_variant'] 46868 10119 ITLCLICHWR True PC9_epitope_Rep5 1256.6522044619599 1256.65054490379 43.907 3 -0.5706461930199834 0.16810986443011028 0.9839813440761486 ['ENST00000559153.5_1_15:40824061-40824274:-|nuORF'] 94385 4082 RRRRFPPYYMR True NCI_RA007_Epitope_Rep2 1596.8572033904798 1596.85555490379 20.516 3 -0.5707621917050624 0.16818720189506706 0.9840404665085288 ['ENSG00000065978|ENST00000321358|YBX1'] 127514 7670 VNLYMNDHRPK True NCI_RA007_Epitope_Rep2 1385.68740367037 1385.6863099358602 34.459 2 -0.5707863980871382 0.16820051537316538 0.9840528029438167 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 127500 18967 VNLQLIQTL True PC9_epitope_Rep2 1040.62299542532 1040.62188993586 78.321 2 -0.5708466366225278 0.16821382842509602 0.9840835009562685 ['ENST00000506496.1_1_5:41929805-41930057:+|nuORF'] 28786 15956 FSTSLFSGSL True PC9_epitope_Rep3 1044.51277627 1044.51166993586 66.521 2 -0.5709932560583305 0.1682751556473168 0.9841582091381947 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 75335 14386 NIPRDTVNL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 60.597 2 -0.571058726334193 0.1682884670785186 0.9841915640178024 ['ENSG00000162998|ENST00000295113|FRZB'] 86420 1252 QKKKKKKKK True H1975_Epitope_Rep2 1170.8288463009796 1170.82720490379 6.782 3 -0.5710773913713102 0.16830177808363875 0.9842010726811002 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 95577 17462 RWSRRTLYVQ True PC9_epitope_Rep5 1363.74730150499 1363.7462099358602 72.168 2 -0.5711413424459364 0.16831508866269765 0.9842336499116542 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 39976 11236 HPLLGVSA True PC9_epitope_Rep5 792.4493881678001 792.4488349679301 48.209 1 -0.5712458373726804 0.16835771212751657 0.9842868744136081 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 12346 7214 DIRGFVAA True PC9_epitope_Rep3 847.4552018242299 847.45410993586 32.76 2 -0.5712689533842895 0.16835771212751657 0.9842986475235104 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'TYMP|p.G147Tfs*12|1|0.21|ENSG00000025708|chr22:50528590-50528591|-/CGTC|frameshift_variant', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 127608 7093 VNYDEENWRK True PC9_epitope_Rep4 1351.61567819875 1351.61404490379 34.551 3 -0.5712932487088541 0.16837102117240385 0.9843110208580782 ['ENSG00000166825|ENST00000300060|ANPEP', 'ENST00000559761.5_1_15:90340736-90342749:-|nuORF'] 101823 19162 SLPFRDQVILL True PC9_epitope_Rep3 1299.7550722240298 1299.75343490379 78.926 3 -0.5713139982795906 0.16838432979131993 0.9843215880500774 ['nc|ENSG00000278570|Q9Y5X4-2|NR2E3', 'ENSG00000278570|ENST00000617575|NR2E3'] 108875 8977 TAAHGLEL True PC9_epitope_Rep2 810.42356734278 810.42246993586 39.885 2 -0.5714891095149559 0.16842425309244533 0.9844107552193984 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 6610 5999 APVTVMCHPLR True PC9_epitope_Rep5 1222.63146901738 1222.62982490379 28.071 3 -0.571507827461739 0.16842425309244533 0.9844202851509367 ['ADAMTS14|p.G374V|1|0.29|ENSG00000138316|chr10:70732272-70732272|G/T|missense_variant'] 138008 9773 YFTIFLLYLTI True NCI_RA007_Epitope_Rep5 1405.7897263972498 1405.7886299358602 44.238 2 -0.5715146089080768 0.16842425309244533 0.9844237377490368 ['ENSG00000167904|ENST00000434581|TMEM68', 'nc|ENSG00000167904|Q96MH6-3|TMEM68', 'nc|ENSG00000167904|Q96MH6-2|TMEM68'] 22070 6247 ESLYCRRWRYW True NCI_RA007_Epitope_Rep1 1616.7670509734 1616.7654149037899 28.333 3 -0.5715603075281764 0.1684267793138761 0.9844470031495088 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 103773 5202 SPVTTDQP True H1975_Epitope_Rep2 843.3974121645899 843.39686496793 25.081 1 -0.5716883836855879 0.1684267793138761 0.9845121992389909 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1'] 23819 12192 EYIKFLRSI True NCI_RA007_Epitope_Rep4 1167.6651945904698 1167.66355490379 53.891 3 -0.5716906470686708 0.1684267793138761 0.9845133512865397 ['nc|ENSG00000196591|Q92769-3|HDAC2', 'ENSG00000196591|ENST00000519065|HDAC2', 'HDAC2|p.T291Sfs*9|1|0.07|ENSG00000196591|chr6:113946119-113946120|-/ATGATAAGTAGAAAATGGA|frameshift_variant', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 81994 17589 PLTTTPRRRP True H1975_Epitope_Rep2 1193.69928868341 1193.69818993586 72.97 2 -0.5716968966007913 0.1684267793138761 0.9845165322388406 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 5202 11033 ALNKDFLP True NCI_RA007_Epitope_Rep1 916.5018176634799 916.50072993586 46.912 2 -0.5717014372346612 0.1684267793138761 0.9845188433600857 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 45761 20862 ISAHRTLCL True PC9_epitope_Rep3 1012.5487849392399 1012.54768993586 85.519 2 -0.5718458879756846 0.16848808742819654 0.9845923588240973 ['AluSp_dup12528|chr4:108625371-108625684:-|1.1350253137669384|0.0295741133308953|5.26|541.0|18|2|anti-sense'] 86423 3568 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 18.529 3 -0.5718984126481839 0.16850139204454542 0.9846190863801565 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 130488 22183 VSPRGRGP True PC9_epitope_Rep1 824.461684187 824.46058993586 90.146 2 -0.5719544641811637 0.168528 0.9846476063011043 ['ENST00000375412.9_2_9:96214723-96215017:-|nuORF'] 16156 5828 EEDIEKHPELK True H1975_Epitope_Rep1 1365.6776097489699 1365.6759749037901 27.488 3 -0.5719839920781764 0.168528 0.9846626296085014 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D'] 16534 5608 EELNTDLYHMK True H1975_Epitope_Rep1 1391.63911606527 1391.63746490379 26.639 3 -0.5720577105693603 0.16854130333914658 0.9847001334499883 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J', 'ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'nc|ENSG00000261480|H3BSY2-2|GOLGA8M'] 55757 16893 LALTESIQEI True PC9_epitope_Rep1 1115.60740493083 1115.60630993586 69.804 2 -0.5721389853186124 0.1685866052286327 0.9847414766408185 ['ENSG00000155897|ENST00000286355|ADCY8'] 104388 9436 SQKNWIKPP True NCI_RA007_Epitope_Rep1 1096.6029286870798 1096.60182993586 40.697 2 -0.5722675143340751 0.16859720977857418 0.9848068468442243 ['ENST00000376511.6_1_6:30577702-30584281:-|nuORF'] 43479 9432 IGKHRKHP True PC9_epitope_Rep2 971.5777169987498 971.57660993586 41.619 2 -0.5723179251642172 0.16859720977857418 0.9848324823859752 ['ENSG00000166441|ENST00000314138|RPL27A', 'ENST00000526562.5_1_11:8704757-8706293:+|nuORF'] 361 11310 AAKECLQWDP True H1975_Epitope_Rep2 1159.5331944447498 1159.53208993586 48.551 2 -0.5723460250056761 0.16861051115910727 0.984846771193875 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 64740 16475 LPYGKLVQI True PC9_epitope_Rep3 1029.62226714933 1029.62116993586 68.509 2 -0.5723731505727851 0.1686236242641413 0.984860563987189 ['ENST00000542055.5_1_12:7507622-7507685:-|nuORF'] 3772 6290 AGSYNNSM True PC9_epitope_Rep3 842.32286732534 842.32176993586 29.227 2 -0.5723946627593287 0.1686236242641413 0.9848715020753513 ['ENST00000555392.1_1_14:74423051-74423234:+|nuORF'] 133570 19345 VWVIVYASL True PC9_epitope_Rep2 1048.5957180483201 1048.5946299358602 79.785 2 -0.5724102370853265 0.1686236242641413 0.9848794207679972 ['SLC6A5|p.A403V|1|0.55|ENSG00000165970|chr11:20617832-20617832|C/T|missense_variant'] 18262 11572 EIQPRHWDPNL True PC9_epitope_Rep3 1403.6945972257897 1403.6929649037902 49.527 3 -0.5724452319979424 0.1686236242641413 0.9848972130581581 ['ENST00000437621.6_1_7:1624674-1624941:+|nuORF'] 101959 6783 SLQELLESHPD True H1975_Epitope_Rep1 1266.6091958359798 1266.60808993586 31.134 2 -0.5724536196478709 0.1686236242641413 0.9849014774034544 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA', 'nc|ENSG00000187741|O15360-2|FANCA'] 129853 19343 VRRRRGAPGR True NCI_RA007_Epitope_Rep5 1179.7173387893897 1179.71624993586 81.282 2 -0.5724729915439609 0.1686236242641413 0.9849113260069559 ['ENST00000444380.5_1_2:85828554-85829758:-|nuORF', 'ENST00000306353.7_2_2:85828206-85829758:-|nuORF'] 93211 14276 RPPWRRWRPWF True NCI_RA007_Epitope_Rep2 1638.8796530872198 1638.87854993586 60.192 2 -0.5724731399350644 0.1686236242641413 0.9849114014473009 ['ENST00000532024.1_1_11:70118214-70118385:+|nuORF'] 119546 15019 VASREQLSI True PC9_epitope_Rep4 1001.5505587610498 1001.54946993586 65.707 2 -0.572503311759701 0.16863692351990786 0.9849267400893558 ['ENSG00000101842|ENST00000217957|VSIG1', 'nc|ENSG00000101842|Q86XK7-2|VSIG1'] 9306 6716 AVQNLQQHNLI True H1975_Epitope_Rep3 1276.6887835693599 1276.6876899358601 30.789 2 -0.5725416297036248 0.16867662582770865 0.9849462189621541 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 114213 5605 TPLSEWETER True H1975_Epitope_Rep3 1246.5829810881398 1246.58134490379 26.6 3 -0.5725630526620401 0.16867662582770865 0.9849571087719857 ['ENST00000460725.5_1_2:113955061-113955313:+|nuORF'] 129520 1464 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 8.1195 3 -0.5726009108221486 0.16867662582770865 0.9849763520762336 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 123833 12812 VGRNRGLK True PC9_epitope_Rep2 898.5460825172999 898.54498993586 54.583 2 -0.5726245011526333 0.16867662582770865 0.9849883424471694 ['ENST00000233813.4_1_2:217539772-217539967:-|nuORF'] 34021 7077 GLVARALLTL True NCI_RA007_Epitope_Rep3 1025.6597152872098 1025.65860993586 34.953 2 -0.5726482980024419 0.16867662582770865 0.9850004373220147 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1', 'nc|ENSG00000197121|Q75T13-3|PGAP1'] 118018 18187 TYEAQFFGF True NCI_RA007_Epitope_Rep4 1108.48656152216 1108.48546993586 78.707 2 -0.5726733648552143 0.16867662582770865 0.9850131771761865 ['ENSG00000167842|ENST00000611091|MIS12'] 56274 9519 LDACLSTVTVP True NCI_RA007_Epitope_Rep1 1117.56891124713 1117.5678099358602 41.022 2 -0.5727005313186976 0.16867662582770865 0.9850269835374809 ['ENSG00000196248|ENST00000641123|OR10S1', 'nc|ENSG00000196248|Q8NGN2|OR10S1'] 73390 7506 MTGDNSKTG True H1975_Epitope_Rep3 909.38619585789 909.38508993586 33.853 2 -0.5727466615360097 0.16867662582770865 0.9850504261238224 ['ATP7A|p.A1261G|1|0.07|ENSG00000165240|chrX:78040714-78040714|C/G|missense_variant'] 88432 6271 QSPSPPPAV True PC9_epitope_Rep5 878.4497820906199 878.44868993586 29.098 2 -0.5727563161198277 0.16867662582770865 0.9850553321926541 ['ENST00000439374.6_1_1:151028391-151032026:-|nuORF', 'ENST00000540998.5_1_1:151029169-151032026:-|nuORF'] 12882 19414 DLIHEIYTV True PC9_epitope_Rep6 1101.57062549929 1101.5695299358601 87.331 2 -0.5727866937182388 0.16868992210866401 0.9850707683482408 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461513.1_1_17:49579856-49580498:-|nuORF', 'ENST00000481157.1_1_12:65261855-65261975:-|nuORF'] 141132 13102 YSSFQMDKLE True PC9_epitope_Rep5 1246.55398945898 1246.55288993586 55.402 2 -0.5728689884578674 0.16870051979208317 0.985112581905631 ['nc|ENSG00000159263|Q14190-2|SIM2', 'ENST00000481185.1_1_21:38072046-38117571:+|nuORF', 'ENSG00000159263|ENST00000290399|SIM2'] 89266 7695 QVVMNSHSYNG True NCI_RA007_Epitope_Rep2 1234.54007073034 1234.5389699358602 34.558 2 -0.57287201134369 0.16870051979208317 0.9851141177097494 ['nc|ENSG00000105642|Q92952-2|KCNN1'] 23227 22286 EVMRLLQAANP True PC9_epitope_Rep1 1240.6597919401997 1240.6586899358601 90.534 2 -0.5730132892713585 0.16877778844000896 0.9851858864795514 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 46261 7650 ISPCKAFP True PC9_epitope_Rep1 861.4418602592099 861.44076993586 34.248 2 -0.5730499535412572 0.1687883828045036 0.9852045090001799 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14', 'ENST00000554020.5_1_14:89068416-89075752:+|nuORF', 'nc|ENSG00000100722|Q6PJT7-8|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-6|ZC3H14'] 19404 10209 ELLWWVFP True PC9_epitope_Rep3 1088.56950330048 1088.56840993586 44.22 2 -0.5730749661554827 0.1687883828045036 0.9852172127375611 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 111940 9010 TIQCLTYTPP True H1975_Epitope_Rep2 1135.55834656343 1135.55724993586 39.608 2 -0.573125078915826 0.1687989764912842 0.9852426630192511 ['ENSG00000055483|ENST00000449938|USP36'] 42901 12621 IERLGIWLF True PC9_epitope_Rep2 1145.6597152872098 1145.65807490379 53.857 3 -0.5731724929515577 0.1687989764912842 0.9852667406884809 ['ENST00000343455.7_1_14:95562307-95562397:-|nuORF'] 63752 5475 LNEHRKRH True PC9_epitope_Rep4 1088.59515796804 1088.59406993586 27.808 2 -0.5732037189470188 0.16880956950041578 0.9852825967023076 ['ENSG00000152475|ENST00000597582|ZNF837'] 53806 19435 KTDLSRESI True PC9_epitope_Rep5 1047.55603806431 1047.5549499358601 79.807 2 -0.57320835650568 0.16880956950041578 0.9852849514994559 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 80841 15175 PHREVPFFQ True PC9_epitope_Rep5 1155.5825275956697 1155.5808749037901 63.379 3 -0.5732559693347541 0.16882286152911263 0.9853091265911681 ['ENST00000573802.1_1_16:2793706-2802586:-|nuORF'] 107837 11818 SVVEDMILK True NCI_RA007_Epitope_Rep5 1032.5525329069999 1032.5514299358601 52.115 2 -0.5732969406455054 0.16883075348599208 0.9853299278709362 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000472593.1_1_3:183521690-183528368:+|nuORF', 'ENST00000481343.1_1_3:183525829-183527073:+|nuORF'] 117386 23093 TVPLDLLLVP True PC9_epitope_Rep4 1078.66379760814 1078.66327496793 97.048 1 -0.573299647977029 0.16883075348599208 0.9853313023395694 ['ENST00000501133.2_1_4:103749296-103764608:+|nuORF'] 96993 3675 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 19.054 2 -0.5733000346349514 0.16883075348599208 0.9853314986390334 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 61206 16676 LILKPVTSP True PC9_epitope_Rep6 966.61136811246 966.61026993586 76.615 2 -0.5733328375336763 0.16886003485936327 0.9853481516056469 ['ENSG00000154175|ENST00000471714|ABI3BP'] 62579 12729 LLKQGQVEL True NCI_RA007_Epitope_Rep3 1026.6073453611798 1026.6062499358602 57.304 2 -0.573353013731922 0.1688733250183888 0.9853583939229534 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43'] 131247 14308 VTFDDHDPV True PC9_epitope_Rep2 1043.45598966987 1043.4548899358601 60.3 2 -0.5734067711105788 0.1688866147523945 0.985385681704918 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 128825 16689 VQAVIEQL True PC9_epitope_Rep3 898.5123823471799 898.5118349679301 69.329 1 -0.5734404883737153 0.1689158938279501 0.9854027955782216 ['ENST00000471757.5_1_2:96691131-96693504:-|nuORF', 'nc|ENSG00000186281|Q6NUI2-3|GPAT2', 'ENST00000486463.5_1_2:96687909-96693504:-|nuORF', 'ENST00000484440.5_1_2:96688852-96698107:-|nuORF', 'nc|ENSG00000186281|Q6NUI2|GPAT2', 'ENSG00000186281|ENST00000434632|GPAT2'] 126274 7373 VLHNTCTRK True NCI_RA007_Epitope_Rep2 1070.56549763254 1070.56440993586 33.304 2 -0.5734900332034997 0.16894517196718953 0.9854279411571274 ['ENSG00000221866|ENST00000321063|PLXNA4', 'PLXNA4|p.G1706Afs*40|1|0.25|ENSG00000221866|chr7:132145227-132145227|C/-|frameshift_variant', 'PLXNA4|p.A1683Pfs*63|1|0.33|ENSG00000221866|chr7:132146518-132146518|C/-|frameshift_variant'] 116609 6089 TVAEAVTHA True PC9_epitope_Rep2 897.4555957470501 897.45448993586 28.814 2 -0.5735458242265863 0.16895575843819452 0.9854562541651714 ['ENST00000475841.2_1_12:132611152-132611335:+|nuORF'] 100062 17200 SIRPSWSSSTL True PC9_epitope_Rep5 1219.61970095003 1219.6186099358601 71.179 2 -0.5735584816398205 0.16895575843819452 0.9854626771881049 ['ENST00000575712.5_1_17:79009028-79031686:+|nuORF'] 60670 7513 LHLSQSHSI True PC9_epitope_Rep1 1020.5352430500802 1020.53414993586 33.717 2 -0.5736046053920668 0.16896364275892942 0.9854860814903342 ['ENST00000418428.6_2_7:12568628-12580546:+|nuORF'] 13841 12048 DQLSKLKDER True NCI_RA007_Epitope_Rep1 1230.65681473474 1230.6557099358602 50.852 2 -0.5736125221927366 0.16896364275892942 0.9854900984656385 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 16724 11671 EESKQKLVP True H1975_Epitope_Rep2 1056.5815245361598 1056.5804299358601 49.966 2 -0.573613496992063 0.16896364275892942 0.985490593073605 ['ENST00000467294.1_1_3:50386754-50386910:-|nuORF', 'ENST00000461020.5_1_3:50386114-50386910:-|nuORF', 'ENST00000487632.5_1_3:50386199-50386910:-|nuORF', 'nc|ENSG00000114388|Q8WTW4-2|NPRL2', 'ENST00000429366.5_1_3:50385517-50386910:-|nuORF', 'ENSG00000114388|ENST00000232501|NPRL2'] 81104 18524 PIYKGYAL True PC9_epitope_Rep5 923.5116540711898 923.51054993586 76.277 2 -0.5737730385921056 0.16898751378918928 0.9855715315515015 ['ENST00000431775.1_1_20:1141706-1141775:+|nuORF'] 513 7495 AAPAPSTVT True PC9_epitope_Rep2 813.42323298961 813.42212993586 34.2 2 -0.5738294730706498 0.16898751378918928 0.9856001560337985 ['ENSG00000166188|ENST00000299237|ZNF319', 'ZNF319|p.E425Sfs*128|1|0.42|ENSG00000166188|chr16:57996993-57996993|C/-|frameshift_variant'] 133098 24817 VVQEPRRII True NCI_RA007_Epitope_Rep5 1108.67167695324 1108.67117496793 102.95 1 -0.5738330677933763 0.16898751378918928 0.985601979231874 ['ENSG00000169071|ENST00000375708|ROR2', 'ROR2|p.S608Afs*15|1|0.23|ENSG00000169071|chr9:91724673-91724673|G/-|frameshift_variant'] 86422 3478 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 18.184 3 -0.5738937858105211 0.1690007993605116 0.9856327727621209 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 103654 10219 SPTVAKQIFP True NCI_RA007_Epitope_Rep4 1086.60734536118 1086.6062499358602 46.163 2 -0.5739994823457878 0.16901408450704225 0.9856863688961279 ['ENSG00000105997|ENST00000612286|HOXA3', 'HOXA3|p.W158R|1|0.29|ENSG00000105997|chr7:27110169-27110169|A/G|missense_variant'] 140089 17436 YQLKGRKCM True PC9_epitope_Rep4 1125.57870516853 1125.5776099358602 75.061 2 -0.5740141168245185 0.16902736922880163 0.9856937888222329 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1'] 61036 12091 LIFESRMQRF True NCI_RA007_Epitope_Rep5 1325.69142642165 1325.68978490379 53.164 3 -0.574134090860018 0.1690379512101544 0.9857546097001066 ['ENST00000513391.2_2_4:48834645-48835423:+|nuORF', 'ENST00000510824.5_2_4:48834645-48834714:+|nuORF', 'ENST00000509122.5_1_4:48834645-48844682:+|nuORF'] 18534 16178 EKLCRARRYLY True NCI_RA007_Epitope_Rep2 1469.7925374452498 1469.79144993586 67.656 2 -0.5741374721957951 0.1690379512101544 0.9857563236624813 ['ENSG00000085999|ENST00000371975|RAD54L'] 130519 10365 VSQKVLPP True PC9_epitope_Rep3 866.5225531080598 866.52144993586 44.813 2 -0.5741478384496927 0.16906181562415076 0.985761578132907 ['ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 48376 13557 IYTLKCRFC True NCI_RA007_Epitope_Rep2 1145.57255715893 1145.57144993586 57.373 2 -0.5741973383172453 0.16906181562415076 0.9857866672573312 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 53619 24933 KRVISGGG True NCI_RA007_Epitope_Rep1 772.4555361773998 772.45498496793 103.19 1 -0.5742004739571869 0.16906181562415076 0.9857882564811148 ['nc|ENSG00000166596|Q8N1V2-3|CFAP52', 'ENSG00000166596|ENST00000352665|CFAP52', 'nc|ENSG00000166596|Q8N1V2-2|CFAP52', 'ENST00000576630.5_1_17:9487588-9546512:+|nuORF'] 7116 4422 AQVLHVPS True NCI_RA007_Epitope_Rep5 849.47085188837 849.46974993586 23.643 2 -0.5742396403795218 0.16907509830876946 0.9858081062083309 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 69472 16333 LVAFLQQVL True PC9_epitope_Rep1 1029.62226714933 1029.62116993586 67.643 2 -0.5742783691496246 0.16908567774936062 0.985827732609678 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 9316 11159 AVQQYRQKMRW True NCI_RA007_Epitope_Rep1 1492.7721363538399 1492.77102993586 47.404 2 -0.574289173165878 0.16908567774936062 0.9858332074406487 ['nc|ENSG00000160072|Q5T9A4-3|ATAD3B', 'ENST00000472194.6_1_1:1413873-1431194:+|nuORF', 'ENSG00000160072|ENST00000673477|ATAD3B', 'ENST00000474481.1_1_1:1425808-1431194:+|nuORF'] 81720 15867 PLNQPLVAS True PC9_epitope_Rep5 937.5232813840499 937.52218993586 66.024 2 -0.5743303358490744 0.16909625651353857 0.9858540651468353 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF', 'ENST00000500626.2_1_1:155619824-155629984:-|nuORF'] 38000 13072 HALLIKDVP True H1975_Epitope_Rep2 1004.60186605792 1004.60076993586 55.404 2 -0.5743316734141175 0.16909625651353857 0.9858547428807884 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 88351 19840 QSIPSTVTV True PC9_epitope_Rep1 930.5022115863001 930.5016649679301 81.13 1 -0.5743542523338564 0.1691095375861132 0.9858661831708745 ['ENSG00000091009|ENST00000265271|RBM27'] 142398 1589 YYESTRKENL True PC9_epitope_Rep1 1301.6251802532897 1301.62354490379 8.7676 3 -0.5744461780281568 0.16912281823412825 0.9859127547016414 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant', 'FLG|p.R145Kfs*9|1|0.23|ENSG00000143631|chr1:152314454-152314455|-/G|frameshift_variant', 'FLG|p.E160Rfs*10|1|0.26|ENSG00000143631|chr1:152314408-152314409|-/T|frameshift_variant'] 26485 21633 FIEFEEIIL True PC9_epitope_Rep2 1151.61142768211 1151.6103299358601 88.686 2 -0.5744952754299253 0.16914667476465228 0.9859376249310156 ['EFCAB5|p.N443I|1|0.16|ENSG00000176927|chr17:30053282-30053282|A/T|missense_variant'] 140509 14720 YRLRRKWEEKI True PC9_epitope_Rep1 1575.89977939511 1575.89812490379 61.442 3 -0.5745078568715652 0.16914667476465228 0.9859439976427872 ['ENSG00000100368|ENST00000403662|CSF2RB', 'nc|ENSG00000100368|P32927-2|CSF2RB'] 66986 12766 LSPGILMNAA True PC9_epitope_Rep5 985.52665251233 985.52554993586 54.112 2 -0.5745279176038963 0.16914667476465228 0.9859541584006195 ['nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2'] 59851 12819 LGFQKRWRK True PC9_epitope_Rep2 1217.71454482473 1217.7128849037902 54.609 3 -0.5747300951358736 0.1692531445284406 0.9860565377272937 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 45535 11484 IQQSHDNPS True H1975_Epitope_Rep2 1024.4573866521998 1024.45628993586 49.228 2 -0.5747342051569709 0.1692531445284406 0.9860586185250808 ['nc|ENSG00000147316|Q8NEM0-2|MCPH1', 'nc|ENSG00000147316|Q8NEM0-3|MCPH1', 'ENSG00000147316|ENST00000344683|MCPH1'] 114782 10547 TQLEAAEW True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 45.635 2 -0.5747730164700664 0.169263716418149 0.9860782668043611 ['ENSG00000008311|ENST00000417368|AASS', 'ENST00000426162.1_1_7:121719305-121721557:-|nuORF'] 101953 14266 SLQEEFQKLEK True NCI_RA007_Epitope_Rep2 1377.7139952576897 1377.7128899358602 60.154 2 -0.5747780676375194 0.169263716418149 0.986080823846272 ['nc|ENSG00000164304|Q8TC20-4|CAGE1', 'nc|ENSG00000164304|Q8TC20-2|CAGE1', 'nc|ENSG00000164304|Q8TC20|CAGE1', 'nc|ENSG00000164304|Q8TC20-3|CAGE1', 'ENSG00000164304|ENST00000502583|CAGE1'] 97013 26890 SCGCGCGKGCC True PC9_epitope_Rep2 976.2693349077999 976.26822993586 110.57 2 -0.574877838007554 0.1692769929041744 0.9861313247748338 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 97015 26225 SCGCGCGKGCC True PC9_epitope_Rep4 976.2693349077999 976.26822993586 111.19 2 -0.5749308435512525 0.1692902689658479 0.9861581503024861 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 126072 7143 VLEHESEKVKE True H1975_Epitope_Rep1 1325.68269512941 1325.68158993586 32.5 2 -0.5749661410088284 0.16930354460318983 0.9861760122662716 ['ENSG00000273820|ENST00000621775|USP27X'] 97014 27018 SCGCGCGKGCC True PC9_epitope_Rep2 976.2693349077999 976.26822993586 111.28 2 -0.5749984736865186 0.16931140834491906 0.9861923727357325 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 33624 9557 GLGELVWGQ True H1975_Epitope_Rep2 957.4919812557698 957.4914349679301 41.735 1 -0.5750334872528454 0.16931140834491906 0.9862100884539174 ['nc|ENSG00000157087|Q01814-6|ATP2B2', 'nc|ENSG00000157087|Q01814-8|ATP2B2', 'nc|ENSG00000157087|Q01814-5|ATP2B2', 'ENSG00000157087|ENST00000360273|ATP2B2', 'nc|ENSG00000157087|Q01814-4|ATP2B2', 'nc|ENSG00000157087|Q01814-7|ATP2B2', 'nc|ENSG00000157087|Q01814-3|ATP2B2', 'nc|ENSG00000157087|Q01814-2|ATP2B2'] 81039 9766 PINSPELLQAK True H1975_Epitope_Rep3 1208.6764875501601 1208.67538993586 42.589 2 -0.5750817406882426 0.16931140834491906 0.9862345009018694 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 4441 7845 AISDYTQTLYK True H1975_Epitope_Rep1 1301.65033237197 1301.6492299358601 35.126 2 -0.5751408147857249 0.16933795682257627 0.9862643842494395 ['HS3ST2|p.S220Y|1|0.14|ENSG00000122254|chr16:22915117-22915117|C/A|missense_variant'] 130001 7268 VRWLRFWLLFW True NCI_RA007_Epitope_Rep3 1620.9081592508396 1620.9070699358601 35.699 2 -0.5751659066281083 0.16933795682257627 0.9862770760887927 ['ENST00000531894.5_1_16:70011782-70023933:-|nuORF'] 28035 21978 FQQRRRRRRDP True PC9_epitope_Rep2 1569.8825066215297 1569.8814099358601 90.015 2 -0.5752041154341913 0.1693672099712368 0.9862964013408873 ['ENSG00000113593|ENST00000261308|PPWD1', 'ENST00000508982.1_1_5:64859104-64863443:+|nuORF'] 16902 11639 EFLNSHLLPK True H1975_Epitope_Rep3 1196.65535818276 1196.6542699358602 49.904 2 -0.5752191028062456 0.16937777635741907 0.9863039812088946 ['ENSG00000156006|ENST00000286479|NAT2'] 77687 10502 NTILCTEE True H1975_Epitope_Rep1 921.41134797657 921.4107949679301 45.35 1 -0.5752291388460652 0.16937777635741907 0.9863090567983557 ['ENST00000489330.6_1_X:11156985-11160533:-|nuORF'] 91696 14201 RKAGGGGG True NCI_RA007_Epitope_Rep4 658.3510711088599 658.35052496793 61.905 1 -0.5752596116134573 0.16938834206826026 0.9863244672892764 ['ENST00000320225.9_2_16:2314685-2318195:-|nuORF', 'ENST00000301730.12_3_16:2314685-2318093:-|nuORF'] 15226 9989 EAECRKWEEK True NCI_RA007_Epitope_Rep2 1306.59758560646 1306.59648993586 43.477 2 -0.5752599979736192 0.16938834206826026 0.9863246626701354 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'nc|ENSG00000158486|Q8TD57-3|DNAH3'] 20678 6485 EQDLERLRDP True H1975_Epitope_Rep1 1269.6313282628898 1269.6302299358601 30.006 2 -0.5753592861558191 0.1694335703443317 0.9863748667353791 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'ENST00000460906.5_1_1:45478985-45479553:+|nuORF', 'ENST00000496439.1_1_1:45478597-45479553:+|nuORF'] 47081 8795 ITTAATEI True PC9_epitope_Rep3 818.43854870058 818.43744993586 38.78 2 -0.5754246638044901 0.16949477518933947 0.9864079181680032 ['ENSG00000120800|ENST00000261637|UTP20'] 43100 9575 IEWPEHPNKIY True H1975_Epitope_Rep2 1424.7088503076 1424.7072149037901 41.804 3 -0.5755270708079537 0.16953729149357705 0.986459679809783 ['nc|ENSG00000115353|P25103-3|TACR1', 'ENSG00000115353|ENST00000305249|TACR1'] 23126 5892 EVKDVQLHLER True H1975_Epitope_Rep3 1364.7412130650398 1364.7395549037901 27.673 3 -0.5755786633737123 0.16953729149357705 0.9864857526966944 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 19422 10278 ELMREVKLWHR True H1975_Epitope_Rep1 1495.8081875093899 1495.8065549037901 44.479 3 -0.5755963990924912 0.16955056000255636 0.9864947149290367 ['RTP3|p.P21L|1|0.23|ENSG00000163825|chr3:46498124-46498124|C/T|missense_variant'] 124973 13916 VHTVKKTYE True PC9_epitope_Rep3 1103.5975089534697 1103.59640993586 58.609 2 -0.575665512608145 0.1695957820738137 0.9865296359439094 ['ENSG00000197863|ENST00000356725|ZNF790'] 56538 8681 LDGGVRKG True NCI_RA007_Epitope_Rep2 800.4504507969599 800.44934993586 38.413 2 -0.5757531148453794 0.16962502596219903 0.9865738907104709 ['ENSG00000101323|ENST00000378789|HAO1'] 20773 5779 EQGSAVRSP True H1975_Epitope_Rep2 929.4566583762099 929.45556993586 27.223 2 -0.575924595736697 0.16963829243353784 0.9866604928316728 ['ENST00000216044.9_1_22:39128126-39128420:+|nuORF'] 81818 12375 PLPQTPEA True PC9_epitope_Rep5 851.4388830537499 851.43778993586 52.597 2 -0.5759616770583593 0.16968351093572764 0.9866792151940904 ['PAPLN|p.Q542Rfs*260|1|0.13|ENSG00000100767|chr14:73255011-73255011|C/-|frameshift_variant'] 75375 23435 NISVPGLQ True PC9_epitope_Rep6 826.45486747106 826.45376993586 103.25 2 -0.5760413480565817 0.16972872799309838 0.9867194354693669 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF', 'nc|ENSG00000131023|O95835-2|LATS1'] 113186 15999 TLPVNVLVL True PC9_epitope_Rep6 966.6113681124599 966.61026993586 73.853 2 -0.5761500003655873 0.16978720685027798 0.986774273919556 ['ENST00000469810.1_3_1:52900976-52902643:-|nuORF'] 43832 5639 IHSKWEKLTKM True PC9_epitope_Rep4 1399.7645913619097 1399.76293490379 28.487 3 -0.5761615714083044 0.16978720685027798 0.9867801131468003 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|52|1|anti-sense'] 36122 8946 GVAKIGHVLI True NCI_RA007_Epitope_Rep4 1005.63350053937 1005.63240993586 41.243 2 -0.5762056226932404 0.16981644487755004 0.9868023417414281 ['chr7:98320298-98355081|156|11.29|0.48|4.55|-|2|BAIAP2L1,None|1'] 46346 10047 ISRCNCRMYY True H1975_Epitope_Rep2 1307.55731810095 1307.55568490379 43.637 3 -0.5762617210219838 0.16982699404143836 0.9868306458918622 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2'] 117135 11923 TVKQLHEAIV True H1975_Epitope_Rep3 1136.65535818276 1136.6542699358602 51.014 2 -0.5762759400045523 0.16982699404143836 0.9868378193937328 ['ENSG00000138095|ENST00000260665|LRPPRC'] 16245 11823 EEERYFRHYR True H1975_Epitope_Rep3 1483.6956598549498 1483.69456993586 50.622 2 -0.5762905895433407 0.16983754253126948 0.9868452098492355 ['nc|ENSG00000130770|Q9UII2-2|ATP5IF1'] 20 7364 AAAADMAY True H1975_Epitope_Rep3 782.32689007662 782.32578993586 33.301 2 -0.5762964421174277 0.16983754253126948 0.9868481623036266 ['ENSG00000116783|ENST00000326637|TNNI3K', 'nc|ENSG00000116783|Q59H18-1|TNNI3K', 'nc|ENSG00000116783|Q59H18-4|TNNI3K'] 52690 3246 KLWNQEEKLC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 17.156 3 -0.5763355807433571 0.16986677741925177 0.9868679055114764 ['ENST00000360128.10_1_8:33357937-33358054:+|nuORF'] 135706 24109 WLRHRRPRYG True NCI_RA007_Epitope_Rep2 1395.77485366551 1395.77320490379 101.28 3 -0.576359839999681 0.16987189726224325 0.9868801419644033 ['ENST00000509770.1_1_5:82352905-82373233:-|nuORF'] 57750 14480 LEENVHEVL True PC9_epitope_Rep1 1080.54513902744 1080.5440499358601 60.523 2 -0.5763989220188459 0.16987189726224325 0.9868998535196641 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000570116.6_1_16:89971082-89977643:+|nuORF', 'ENST00000563484.1_1_16:89971421-89975542:+|nuORF'] 127154 12430 VLTWGLLQA True PC9_epitope_Rep5 999.5753169569099 999.57420993586 52.811 2 -0.5764010960256575 0.16987189726224325 0.9869009499536838 ['ENST00000265678.8_1_6:166825790-166826246:-|nuORF'] 23071 20564 EVIFKYLAT True PC9_epitope_Rep5 1082.60119735158 1082.60010993586 84.144 2 -0.5764275128455215 0.16987189726224325 0.9869142724819997 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 136127 22250 WRPYIQLRAPP True PC9_epitope_Rep2 1395.77753900411 1395.77644993586 91.061 2 -0.5764463900439741 0.16987701645104616 0.9869237920905695 ['ENST00000515337.1_2_5:158758770-158758959:+|nuORF'] 9798 8759 AYLAALTQL True NCI_RA007_Epitope_Rep3 962.54368247546 962.54258993586 41.542 2 -0.5764475161746878 0.16987701645104616 0.9869243599743798 ['ENSG00000079435|ENST00000244289|LIPE', 'nc|ENSG00000079435|Q05469-2|LIPE'] 115914 7608 TSFSPPPPP True H1975_Epitope_Rep1 925.4545331178898 925.45342993586 34.256 2 -0.5765194496192677 0.16987701645104616 0.9869606311592757 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 84640 8547 QDFYWEAEWQ True H1975_Epitope_Rep2 1400.567331024 1400.56567490379 37.831 3 -0.5765253971784366 0.16987701645104616 0.9869636298185875 ['nc|ENSG00000188566|Q9UHB4-3|NDOR1', 'nc|ENSG00000188566|Q9UHB4-4|NDOR1', 'ENSG00000188566|ENST00000684003|NDOR1', 'nc|ENSG00000188566|Q9UHB4-2|NDOR1'] 117335 8549 TVNVTVLDAN True H1975_Epitope_Rep2 1044.54513902744 1044.5440499358601 37.839 2 -0.5765804576575695 0.16990624650620498 0.9869913882479349 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 56436 6943 LDEIGSYSEEK True NCI_RA007_Epitope_Rep2 1268.5772270013601 1268.57612993586 31.626 2 -0.576662470248908 0.16993547562767522 0.9870327272455114 ['ENSG00000113716|ENST00000502717|HMGXB3'] 97064 5361 SDEDRISEVR True NCI_RA007_Epitope_Rep1 1204.56839365316 1204.5667349037901 24.932 3 -0.5766746020221315 0.16994873269129415 0.9870388416138641 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1', 'SYNJ1|p.D661Efs*36|1|0.04|ENSG00000159082|chr21:32666516-32666519|GTTG/-|frameshift_variant', 'nc|ENSG00000159082|O43426-5|SYNJ1', 'SYNJ1|p.N163Afs*4|1|0.17|ENSG00000159082|chr21:32699914-32699950|ATGCAGACCATGCAAAATAAAAGTTTCCTGAATTCAA/-|frameshift_variant'] 13631 3449 DPLELDDYHEK True NCI_RA007_Epitope_Rep2 1372.61467513924 1372.6130249037901 18.072 3 -0.576770570048646 0.1699779602005941 0.9870872024407976 ['ENSG00000153790|ENST00000283905|C7orf31'] 135054 8698 WDYGYESGTVP True NCI_RA007_Epitope_Rep3 1272.52988288612 1272.52878993586 41.295 2 -0.5768951485441759 0.17000718677633156 0.9871499629734113 ['SETDB2|p.A685S|1|0.19|ENSG00000136169|chr13:49491742-49491742|G/T|missense_variant'] 85652 16590 QGLVHPPALS True PC9_epitope_Rep5 1017.5607295219298 1017.55962993586 68.819 2 -0.576951788460691 0.17004966702333232 0.9871784904733779 ['ENST00000540915.5_1_12:6797747-6797840:-|nuORF'] 80664 7668 PGTEEGPED True H1975_Epitope_Rep2 929.3614205786898 929.36032993586 34.447 2 -0.5769780246102509 0.17004966702333232 0.9871917032493208 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566292.5_1_16:58035387-58044017:+|nuORF', 'ENST00000565662.5_1_16:58035387-58051252:+|nuORF', 'nc|ENSG00000103005|Q9BQ65-3|USB1', 'ENST00000569252.5_1_16:58035387-58036554:+|nuORF', 'ENST00000563207.1_1_16:58035387-58048199:+|nuORF'] 45768 17385 ISALRQHRRN True PC9_epitope_Rep4 1249.71158470261 1249.71048993586 74.873 2 -0.5770043340672661 0.1700629212047654 0.9872049520288815 ['ENSG00000146072|ENST00000296861|TNFRSF21'] 97783 7883 SEKYYVDSV True PC9_epitope_Rep4 1088.5026055091198 1088.5015099358602 37.751 2 -0.577034341398767 0.17008399603973046 0.9872200618440092 ['nc|ENSG00000211938|P01780|IGHV3-7'] 102359 12465 SLSWKFFPYQK True NCI_RA007_Epitope_Rep1 1429.73942215989 1429.73832993586 52.464 2 -0.5770477113664213 0.17008399603973046 0.9872267937379728 ['SOWAHB|p.K729Qfs*26|1|0.5|ENSG00000186212|chr4:76895666-76895667|-/C|frameshift_variant'] 79484 4383 PAYKMQFKNN True NCI_RA007_Epitope_Rep3 1239.6070280913498 1239.6053849037899 24.015 3 -0.5770718901836401 0.17008399603973046 0.9872389673763173 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 114866 19923 TQPVPKLDEVI True PC9_epitope_Rep3 1237.6918032611297 1237.69070993586 81.874 2 -0.5770771641035252 0.17008399603973046 0.9872416226050155 ['ENSG00000152465|ENST00000378165|NMT2'] 29571 3340 FVIFFFFFWYF True NCI_RA007_Epitope_Rep1 1608.7845814471596 1608.78237987172 16.886 4 -0.5772730169580048 0.17013667135010857 0.9873402010298888 ['ENST00000316423.10_1_4:39501678-39501759:-|nuORF'] 129968 23874 VRVPHLRRLLQ True H1975_Epitope_Rep2 1385.87317072445 1385.87152490379 98.342 3 -0.5772812213089353 0.17013667135010857 0.9873443293876402 ['ENST00000357402.9_1_16:29831738-29841859:+|nuORF', 'ENST00000563915.5_1_16:29831753-29841878:+|nuORF'] 5866 20108 APGALLLE True PC9_epitope_Rep2 782.4538048419 782.45270993586 82.755 2 -0.5772969528164609 0.17013667135010857 0.9873522450890878 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 7861 9259 ATAAVTAAVK True PC9_epitope_Rep5 901.5232813840499 901.52218993586 40.563 2 -0.5773164863577555 0.17013667135010857 0.9873620734104195 ['ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 24647 23865 FAKLHRRCV True NCI_RA007_Epitope_Rep2 1128.63385197588 1128.6322049037901 100.2 3 -0.5773356281192852 0.17013667135010857 0.9873717041030939 ['ENST00000394221.2_1_3:93780266-93781735:-|nuORF'] 25448 14902 FEEESVFAVT True PC9_epitope_Rep4 1156.5288202569598 1156.5277299358602 65.262 2 -0.5774446813673291 0.17013667135010857 0.987426561921543 ['NUP107|p.L234F|1|0.26|ENSG00000111581|chr12:68702757-68702757|A/T|missense_variant'] 84344 14247 PYVNNVPHL True PC9_epitope_Rep2 1051.54507945779 1051.54398993586 60.068 2 -0.577446213053913 0.17013667135010857 0.9874273323002856 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 137665 16343 YEILVWCVYY True NCI_RA007_Epitope_Rep5 1349.6365968841299 1349.63548993586 69.619 2 -0.5774623642539893 0.17013667135010857 0.9874354555286083 ['ENSG00000237110|ENST00000434551|TAAR9'] 116367 13318 TTFRPELL True PC9_epitope_Rep6 975.5389314481898 975.53782993586 62.883 2 -0.5774735828455179 0.17013667135010857 0.9874410976951816 ['ENSG00000108055|ENST00000361804|SMC3', 'ENST00000424783.1_1_2:99718519-99719212:+|nuORF'] 4588 6664 AKQFFQDKARF True H1975_Epitope_Rep1 1384.7251690780797 1384.7240699358601 30.685 2 -0.5774781826916373 0.17013667135010857 0.9874434110457158 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant'] 135229 26285 WFGGCSWA True PC9_epitope_Rep4 912.35885891124 912.35776993586 111.45 2 -0.5774881684324547 0.17016588699248 0.9874484329650567 ['ENSG00000104783|ENST00000648319|KCNN4'] 67319 11069 LSSDARYKMP True PC9_epitope_Rep1 1166.5753936099 1166.5742899358602 47.465 2 -0.5775699775435339 0.1701764189351002 0.98748957030673 ['ENSG00000169340|ENST00000302451|PDILT'] 804 8615 AAYHKHLME True H1975_Epitope_Rep1 1098.5280494946599 1098.52694993586 38.066 2 -0.5775836951961072 0.1701764189351002 0.9874964672562879 ['ADCY2|p.G205A|1|0.35|ENSG00000078295|chr5:7626210-7626210|G/C|missense_variant'] 99639 19828 SIFSGFVIF True NCI_RA007_Epitope_Rep1 1015.5378688190299 1015.5372749679301 81.335 1 -0.5775962354774316 0.17018695020515032 0.9875027720187847 ['SLC6A5|p.A516S|1|0.44|ENSG00000165970|chr11:20630737-20630737|G/T|missense_variant'] 131324 14138 VTGLAQLP True NCI_RA007_Epitope_Rep1 797.46470387877 797.4641549679301 59.026 1 -0.577618835222997 0.17018695020515032 0.9875141337321669 ['L1PB1_dup5315|chr6:117371060-117372034:+|1.924318660828955|0.1077496189140812|4.16|534.0|43|3|anti-sense'] 65157 6811 LQNVQVPPP True H1975_Epitope_Rep3 990.5498304850599 990.54872993586 31.152 2 -0.5776540068210538 0.1702161627127303 0.987531814352706 ['ENST00000531236.1_1_11:71192815-71195619:+|nuORF'] 16038 6856 EDVFVRAISKM True H1975_Epitope_Rep1 1293.6751076511698 1293.6734549037901 31.417 3 -0.5777113918159252 0.1702453742875844 0.9875606578347765 ['ENST00000251241.8_1_17:57679886-57679970:+|nuORF'] 37615 6547 GVVTRLRVP True NCI_RA007_Epitope_Rep1 995.6239984848298 995.62290993586 29.481 2 -0.577808519396807 0.1702531847642157 0.9876094666002984 ['ENST00000512916.2_1_12:54330967-54333404:-|nuORF'] 87493 13219 QQEWEKNLREN True PC9_epitope_Rep5 1472.70080480504 1472.69970993586 55.854 2 -0.57784051285276 0.1702531847642157 0.9876255410962373 ['ENSG00000204315|ENST00000375156|FKBPL'] 23368 7962 EVRPTYFEMKN True NCI_RA007_Epitope_Rep1 1412.6758359271596 1412.6747299358601 34.964 2 -0.5778500141640054 0.1702531847642157 0.9876303145668427 ['nc|ENSG00000164197|Q86T96-2|RNF180', 'ENSG00000164197|ENST00000389100|RNF180'] 3487 12682 AGLICRYP True PC9_epitope_Rep1 891.46365833295 891.46256993586 53.653 2 -0.5779114564238241 0.17029020208792262 0.9876611801271528 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A', 'ENST00000568515.1_1_15:66007788-66048788:-|nuORF'] 81553 12143 PLKEEEYRKLR True PC9_epitope_Rep6 1459.8147123584697 1459.81360993586 58.059 2 -0.5779147272416847 0.17029020208792262 0.9876628230734908 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 10946 7808 DAGRYFFRMEK True H1975_Epitope_Rep1 1418.6765046334997 1418.6754099358602 34.987 2 -0.5779159516132258 0.17029020208792262 0.9876634380768152 ['ENSG00000129450|ENST00000250360|SIGLEC9', 'nc|ENSG00000168995|Q9Y286-4|SIGLEC7', 'nc|ENSG00000168995|Q9Y286-3|SIGLEC7', 'nc|ENSG00000168995|Q9Y286-2|SIGLEC7', 'ENSG00000168995|ENST00000317643|SIGLEC7', 'nc|ENSG00000129450|Q9Y336-2|SIGLEC9'] 106574 13957 STNFATRRWIE True PC9_epitope_Rep1 1379.6945972257897 1379.6935099358602 58.522 2 -0.5779669417510788 0.17029020208792262 0.9876890485773904 ['ENSG00000066135|ENST00000372396|KDM4A'] 9307 6584 AVQNLQQHNLI True NCI_RA007_Epitope_Rep5 1276.6887835693599 1276.6876899358601 31.986 2 -0.5780791935595443 0.1703513336632241 0.9877454154071111 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 5116 11284 ALLLASCL True PC9_epitope_Rep1 802.46226135062 802.46116993586 48.283 2 -0.578115219900173 0.17036457668241603 0.9877635020347643 ['ENST00000486040.1_1_7:2275163-2277700:-|nuORF', 'ENST00000242257.12_1_7:2275163-2279115:-|nuORF'] 91693 16465 RKAARALA True NCI_RA007_Epitope_Rep2 855.5402688608699 855.53916993586 68.773 2 -0.5781304204102209 0.17037781927883924 0.9877711327175164 ['ENST00000420843.6_1_11:74976857-74977136:-|nuORF'] 47110 14943 ITTRWRSP True PC9_epitope_Rep3 1015.5563128478299 1015.55520993586 62.611 2 -0.5782684052100299 0.17040430320346045 0.9878403858895632 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-2|MZF1', 'ENST00000600004.1_1_19:59073441-59074896:-|nuORF'] 123910 7497 VGRSFEPIIK True NCI_RA007_Epitope_Rep3 1144.6604435631998 1144.65880490379 36.613 3 -0.5783021014641245 0.17040430320346045 0.9878572934513434 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 44671 20260 ILSTLLCPN True PC9_epitope_Rep4 972.5314035396 972.53030993586 86.073 2 -0.5783800563843032 0.1704494668965077 0.9878964019804325 ['ENST00000211314.4_1_6:52551206-52551344:+|nuORF'] 139901 7401 YPTRTKGVAY True H1975_Epitope_Rep3 1154.6084079903399 1154.60730993586 33.447 2 -0.578460091546071 0.17051059007549518 0.9879365447392519 ['ENSG00000184898|ENST00000331426|RBM43'] 29057 7751 FTFIEECVYP True NCI_RA007_Epitope_Rep5 1246.55801221026 1246.5569099358602 36.513 2 -0.5784731424075973 0.17052382928464263 0.9879430896772097 ['CCT6B|p.N368Y|2|0.29|ENSG00000132141|chr17:34939294-34939294|T/A|missense_variant'] 100199 5234 SIVEEYGP True NCI_RA007_Epitope_Rep3 892.4178132559998 892.41670993586 27.594 2 -0.5785084327154081 0.17055302848934642 0.9879607863099497 ['ENST00000261530.11_1_14:76672664-76672892:+|nuORF'] 132267 10102 VTVTMGEKYVQ True NCI_RA007_Epitope_Rep1 1253.63257413285 1253.6314699358602 43.305 2 -0.5785455566162163 0.1705767818953685 0.9879794004146701 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'ENST00000492261.5_1_12:124409716-124414381:+|nuORF'] 46656 13465 ITDPANEKLLT True H1975_Epitope_Rep3 1213.65541775241 1213.65432993586 57.067 2 -0.5785922016338957 0.1705767818953685 0.9880027855514041 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF', 'ENST00000503745.1_1_4:99273670-99308609:+|nuORF', 'ENST00000511379.5_1_4:99182716-99300325:+|nuORF'] 123883 12248 VGRRRIKL True NCI_RA007_Epitope_Rep3 996.6668663563198 996.66576993586 55.325 2 -0.5785933445573939 0.1705767818953685 0.9880033585071636 ['ENSG00000170340|ENST00000301998|B3GNT2'] 25706 10880 FERREGYL True PC9_epitope_Rep2 1068.5352430500798 1068.5341499358601 47.167 2 -0.5786804105814567 0.17060597839097336 0.9880469996384407 ['ENST00000592852.1_2_19:45910101-45910188:+|nuORF'] 130401 18937 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 78.61 2 -0.5789043643336652 0.17074688796680498 0.9881592031607263 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 137449 7006 YEDLRGQI True PC9_epitope_Rep4 992.4927095317598 992.49160993586 34.196 2 -0.5789970753217852 0.17077608081581847 0.9882056308786928 ['ENSG00000105428|ENST00000222033|ZNRF4'] 94149 25323 RRNKRLRMR True PC9_epitope_Rep3 1284.7785591469599 1284.77797496793 102.82 1 -0.5790137109134967 0.17078931409785836 0.9882139603001316 ['ENST00000544803.5_1_2:176794774-176794831:-|nuORF'] 99641 19436 SIFSGFVIF True NCI_RA007_Epitope_Rep5 1015.5378688190299 1015.5372749679301 81.648 1 -0.579022692524123 0.1708185053380783 0.988218457213618 ['SLC6A5|p.A516S|1|0.44|ENSG00000165970|chr11:20630737-20630737|G/T|missense_variant'] 129517 854 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 4.7455 3 -0.5790458762124723 0.17084769564662325 0.9882300642785514 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 84085 23988 PWKIQIIFF True PC9_epitope_Rep5 1190.6852017590597 1190.68410993586 97.253 2 -0.5790883283949447 0.17086092715231788 0.9882513162026418 ['nc|ENSG00000258806|Q8NGC8|OR11H7'] 122293 10581 VGAVQHVL True PC9_epitope_Rep5 821.47593726881 821.47484993586 45.688 2 -0.5791662100606306 0.1709193036207254 0.9882902975824056 ['ENST00000451055.6_1_3:122632522-122634295:-|nuORF'] 135844 11224 WPCQHHCFYF True PC9_epitope_Rep1 1366.5375686325403 1366.5364699358602 48.054 2 -0.5791865169882965 0.1709193036207254 0.9883004601641803 ['ENST00000501122.2_1_11:65211061-65211343:+|nuORF'] 97371 7878 SEDLSAYASI True H1975_Epitope_Rep1 1054.48187006454 1054.48076993586 35.253 2 -0.57928752272413 0.170929805805103 0.9883509994654301 ['ENSG00000169047|ENST00000305123|IRS1'] 128345 9234 VPQKVVDKIT True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 42.168 3 -0.5792910076756721 0.170929805805103 0.9883527429335295 ['ENSG00000204228|ENST00000374662|HSD17B8'] 117600 9999 TVSWYYRMNRR True NCI_RA007_Epitope_Rep1 1530.7514009092597 1530.75030993586 42.9 2 -0.5793453599161802 0.17094030731917473 0.9883799322489288 ['ENSG00000134247|ENST00000393203|PTGFRN'] 15931 11898 EDLRQCLNRYK True NCI_RA007_Epitope_Rep2 1436.71943207464 1436.71832993586 50.884 2 -0.5793482579564334 0.17094030731917473 0.9883813818522781 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 12601 7089 DLAENARFER True PC9_epitope_Rep5 1219.5945488313498 1219.59289490379 32.234 3 -0.5793793871883706 0.1709508081630048 0.9883969519653493 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 114557 6410 TQDAESIHY True H1975_Epitope_Rep2 1062.4618033263 1062.46127496793 29.579 1 -0.5793841572054118 0.1709508081630048 0.9883993376921683 ['ENST00000498831.1_1_3:183854405-183855259:+|nuORF'] 37274 19099 GVRRTRRRGK True NCI_RA007_Epitope_Rep4 1240.77010263824 1240.7690099358601 82.612 2 -0.5793876023087526 0.17096908005998915 0.9884010607421312 ['ENST00000324771.12_1_6:30867402-30867627:+|nuORF'] 81921 16740 PLSLTALKL True PC9_epitope_Rep6 954.6113681124599 954.61026993586 76.88 2 -0.5794036660767597 0.17096908005998915 0.9884090947227131 ['ENSG00000137269|ENST00000370888|LRRC1'] 88777 8836 QTQQEEREVAL True H1975_Epitope_Rep3 1329.65245763029 1329.6513699358602 38.994 2 -0.5794195058181141 0.17096908005998915 0.9884170162950586 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 99457 10440 SIASEVIARPA True NCI_RA007_Epitope_Rep1 1112.61897267404 1112.6178699358602 44.592 2 -0.5794276014230696 0.17096908005998915 0.9884210648270934 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2', 'nc|ENSG00000136108|Q8WWK9-4|CKAP2'] 15523 9805 EANQVLQKWEK True NCI_RA007_Epitope_Rep2 1371.7146639640298 1371.71356993586 42.763 2 -0.5794597304483945 0.17096908005998915 0.9884371313009017 ['ENSG00000150672|ENST00000376104|DLG2'] 103188 14192 SPIKTETFFKE True H1975_Epitope_Rep3 1325.68671788069 1325.68562993586 59.925 2 -0.5794792685725614 0.1709982609805517 0.9884469008262959 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-2|RIOX2'] 101042 11124 SLGEHYNSV True PC9_epitope_Rep4 1004.45632402304 1004.45522993586 50.565 2 -0.5794900900222693 0.17100603043936058 0.9884523115705671 ['ENSG00000189401|ENST00000338352|OTUD6A'] 39613 19884 HLLGPCLALS True PC9_epitope_Rep5 1022.55828699378 1022.55718993586 81.536 2 -0.5795037877262758 0.17100603043936058 0.9884591602047799 ['ENST00000527820.5_1_11:75164008-75167814:-|nuORF'] 126387 5066 VLKKKKKKKK True NCI_RA007_Epitope_Rep2 1254.92274668582 1254.9211049037901 24.331 3 -0.5795107713827812 0.17100603043936058 0.9884626518177999 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 134816 9837 VYTWHQDGL True PC9_epitope_Rep2 1117.5192586327698 1117.5181699358602 43.173 2 -0.5795553926352246 0.1710083430376314 0.9884849594087731 ['ENSG00000134398|ENST00000256797|ERN2', 'ERN2|p.L515Wfs*48|1|0.18|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant'] 89504 12963 QYKCLQSYL True PC9_epitope_Rep2 1144.5586809166 1144.55758993586 55.154 2 -0.579568213649437 0.1710083430376314 0.988491368513183 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|293|2|anti-sense'] 94755 20850 RSKKRKKIRRV True PC9_epitope_Rep6 1453.97936712849 1453.97826993586 92.972 2 -0.5796317320476811 0.1710083430376314 0.9885231172740319 ['ENST00000561144.1_1_15:60740147-60741119:-|nuORF'] 117832 14024 TVYDRTTVL True PC9_epitope_Rep4 1066.5658744720201 1066.56476993586 61.855 2 -0.5796321510423071 0.1710083430376314 0.9885233266832291 ['ENSG00000188786|ENST00000373036|MTF1'] 73510 15037 MVIMDWEE True PC9_epitope_Rep5 1051.43545454943 1051.4343499358602 62.844 2 -0.5796325295788463 0.1710083430376314 0.9885235158716744 ['nc|ENSG00000184647|Q6UWB4-2|PRSS55', 'ENSG00000184647|ENST00000328655|PRSS55'] 131729 8804 VTPGARRRQ True PC9_epitope_Rep1 1039.59990899531 1039.5988099358601 38.706 2 -0.5797953153488042 0.17106942317508933 0.9886048553783195 ['ENST00000339824.6_2_12:118406619-118406781:-|nuORF'] 130403 19353 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 80.324 2 -0.5799586179267927 0.17114372308183123 0.9886864150554433 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 103245 13992 SPLGLAGL True H1975_Epitope_Rep3 726.42759009406 726.4270449679301 59.139 1 -0.5799807853847583 0.17114372308183123 0.9886974834204855 ['nc|ENSG00000197558|A2VEC9-2|SSPOP', 'nc|ENSG00000197558|A2VEC9|SSPOP'] 45779 6314 ISASDFDFAV True NCI_RA007_Epitope_Rep3 1070.49204082542 1070.49094993586 31.838 2 -0.5801064789231347 0.17119933644904534 0.9887602298804101 ['nc|ENSG00000169760|Q8N2Q7-2|NLGN1', 'ENSG00000169760|ENST00000695368|NLGN1', 'nc|ENSG00000169760|Q8N2Q7|NLGN1'] 4278 20085 AIGESPVLVA True PC9_epitope_Rep5 954.5385970950199 954.5380449679301 82.306 1 -0.580115804422336 0.17119933644904534 0.9887648842955126 ['ENST00000512916.2_1_12:54330967-54333404:-|nuORF'] 61483 23716 LKARGGGG True NCI_RA007_Epitope_Rep3 714.4136713654199 714.41312496793 102.81 1 -0.5801201613095882 0.17119933644904534 0.9887670588030644 ['ENST00000378119.8_1_6:24719560-24720079:-|nuORF', 'ENST00000308020.5_1_11:490627-491155:+|nuORF'] 115765 13159 TSDEKGCQDV True H1975_Epitope_Rep2 1080.43935362956 1080.43824993586 55.74 2 -0.5801780635143067 0.17120709455148653 0.9887959550466828 ['ENSG00000119681|ENST00000261978|LTBP2'] 40004 8849 HPPRMKMRT True NCI_RA007_Epitope_Rep2 1152.6008375954398 1152.59920490379 39.069 3 -0.5802360884752827 0.17120709455148653 0.9888249078017503 ['ENST00000477132.1_1_2:37544174-37551396:-|nuORF'] 95911 16606 RYLDWIKKI True PC9_epitope_Rep6 1233.7233781729299 1233.7217249037901 76.332 3 -0.5802609070820772 0.17120709455148653 0.9888372901093936 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 68923 7025 LTPARAPSP True H1975_Epitope_Rep2 908.5079656730799 908.50686993586 31.947 2 -0.5803059836635186 0.17123626329808445 0.9888597771506761 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 5111 2700 ALLIRFWFK True NCI_RA007_Epitope_Rep2 1192.71208521324 1192.71043490379 14.728 3 -0.5803147211413952 0.1712813805863026 0.9888641356247826 ['ENST00000421826.6_2_6:27223302-27223911:+|nuORF'] 89624 9133 QYRRVIGMFYK True PC9_epitope_Rep5 1459.7758247519498 1459.77418490379 40.076 3 -0.5803946879996832 0.17133151523850534 0.9889040201246984 ['ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 125999 9558 VLDQYNKKPA True NCI_RA007_Epitope_Rep5 1174.63462273818 1174.63352993586 43.404 2 -0.5804458118985217 0.17133151523850534 0.9889295141256664 ['ENST00000478171.1_1_3:48450818-48451478:-|nuORF'] 128333 5334 VPQEAQKIQA True PC9_epitope_Rep4 1110.6033226098998 1110.6022299358601 27.232 2 -0.5804695399270137 0.17133151523850534 0.9889413453591995 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN'] 79886 20029 PELTEDQKKEV True PC9_epitope_Rep3 1314.6667107120998 1314.66505490379 82.291 3 -0.5804722719523099 0.17133151523850534 0.9889427075469157 ['CETN1|p.Q31K|1|0.57|ENSG00000177143|chr18:580499-580499|C/A|missense_variant'] 5280 7225 ALQDVDHYCP True NCI_RA007_Epitope_Rep1 1159.49680893603 1159.49570993586 32.093 2 -0.5804783342791768 0.17133151523850534 0.9889457301855811 ['ENSG00000189067|ENST00000622633|LITAF'] 24824 16144 FAVFHPHFVL True PC9_epitope_Rep5 1212.64439957624 1212.64276490379 67.086 3 -0.580526969611635 0.1713738936288972 0.9889699776015766 ['ENSG00000147262|ENST00000682440|GPR119'] 80897 19040 PHWRRPRRRRG True NCI_RA007_Epitope_Rep4 1528.8824470518798 1528.8808049037902 82.361 3 -0.5805715988385343 0.1713738936288972 0.9889922248444424 ['KCNC2|p.D173Rfs*80|1|0.2|ENSG00000166006|chr12:75207467-75207468|-/G|frameshift_variant'] 42110 15857 IDLRTNVL True PC9_epitope_Rep1 942.5498304850599 942.54872993586 65.806 2 -0.5806130303265251 0.1714003221330952 0.9890128755584865 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 80898 19140 PHWRRPRRRRG True NCI_RA007_Epitope_Rep4 1528.8824470518798 1528.8808049037902 82.77 3 -0.5806410917859941 0.1714003221330952 0.989026860885323 ['KCNC2|p.D173Rfs*80|1|0.2|ENSG00000166006|chr12:75207467-75207468|-/G|frameshift_variant'] 63660 24492 LMRFRKPWPLR True PC9_epitope_Rep5 1498.8707281962998 1498.86907490379 99.287 3 -0.5807159718803703 0.17148460544987804 0.9890641744174199 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 63659 24555 LMRFRKPWPLR True PC9_epitope_Rep1 1498.8707281962998 1498.86907490379 99.311 3 -0.5807275038603658 0.17148460544987804 0.9890699202312018 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 39771 20900 HLWHPRRHYLL True PC9_epitope_Rep5 1526.8371195688999 1526.83602993586 85.446 2 -0.5807612406544753 0.17148460544987804 0.9890867285433766 ['ENST00000448759.1_1_1:43352960-43353698:-|nuORF'] 130541 4205 VSRDDAQL True PC9_epitope_Rep4 902.4457593393399 902.44466993586 22.546 2 -0.5807806858140812 0.17148460544987804 0.9890964157747122 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 126615 9843 VLMKLLPPP True H1975_Epitope_Rep3 1006.6249100016198 1006.62380993586 42.89 2 -0.5808020200483477 0.17148460544987804 0.9891070435067373 ['ENSG00000176102|ENST00000323959|CSTF3'] 4974 17984 ALGSFLLNSL True PC9_epitope_Rep1 1033.58079626017 1033.5796899358602 73.969 2 -0.5808894752426729 0.17148460544987804 0.98915060307238 ['ENST00000577886.5_1_17:15546108-15546210:-|nuORF'] 16855 14764 EFEGTFSLTP True H1975_Epitope_Rep2 1126.51825557326 1126.51714993586 61.948 2 -0.5809350097289188 0.17148460544987804 0.989173278646689 ['ENST00000538502.5_2_1:109856041-109856413:-|nuORF'] 56512 11035 LDFNKSGSVP True PC9_epitope_Rep1 1062.53457434374 1062.53346993586 47.334 2 -0.5809392306245741 0.17148460544987804 0.9891753804523251 ['nc|ENSG00000180881|Q9BXY5|CAPS2', 'ENSG00000180881|ENST00000699294|CAPS2', 'nc|ENSG00000180881|Q9BXY5-5|CAPS2', 'nc|ENSG00000180881|Q9BXY5-3|CAPS2', 'ENST00000409004.5_1_12:75670025-75710066:-|nuORF', 'nc|ENSG00000180881|Q9BXY5-2|CAPS2'] 124010 18567 VGSFLSVTV True PC9_epitope_Rep6 907.5014833103099 907.50038993586 84.058 2 -0.580939386089615 0.17148460544987804 0.9891754578660655 ['ENST00000261439.8_1_4:38139186-38139444:+|nuORF'] 5817 12229 APELLQGSYG True NCI_RA007_Epitope_Rep5 1033.50802524273 1033.5069299358602 53.689 2 -0.580984367315308 0.17148460544987804 0.9891978548468691 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1'] 129745 23808 VRQLRHLHRTR True PC9_epitope_Rep5 1470.8756303359398 1470.87397490379 96.559 3 -0.5810298232348188 0.1715137600051022 0.9892204853579921 ['nc|ENSG00000184274|P59091|LINC00315'] 84297 6776 PYRQRDPR True NCI_RA007_Epitope_Rep4 1086.56827451386 1086.5671699358602 32.683 2 -0.5810484650772191 0.17152696949887594 0.9892297654935525 ['ENST00000526508.5_1_11:46694742-46694910:+|nuORF'] 14712 14297 DVLLDETL True PC9_epitope_Rep1 916.47532813212 916.47422993586 59.818 2 -0.5811738377143496 0.1715479170320297 0.9892921651325897 ['nc|ENSG00000143457|Q9H4A5-2|GOLPH3L', 'ENSG00000143457|ENST00000271732|GOLPH3L'] 100597 11782 SLCSDSEEEMK True H1975_Epitope_Rep3 1256.4900688730797 1256.48896993586 50.464 2 -0.5811758039544176 0.1715479170320297 0.9892931435851456 ['ENSG00000133636|ENST00000256010|NTS'] 117753 19827 TVVIILEGVP True PC9_epitope_Rep1 1038.63249747986 1038.6314099358601 81.078 2 -0.5811789409201085 0.1715479170320297 0.9892947046104887 ['ENSG00000104154|ENST00000261867|SLC30A4'] 101905 14747 SLPSWSCSLSI True PC9_epitope_Rep6 1178.56416021986 1178.56306993586 68.672 2 -0.5811967079000462 0.1715479170320297 0.9893035456091814 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 89123 7220 QVQKQWDKVEE True H1975_Epitope_Rep1 1415.7044932031497 1415.70338993586 32.782 2 -0.5812739867629284 0.17162216022319648 0.98934199520623 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'SLX4|p.V1558Cfs*3|1|0.16|ENSG00000188827|chr16:3584840-3584840|G/-|frameshift_variant', 'ENSG00000188827|ENST00000294008|SLX4'] 66425 20769 LSGLTRARVEV True PC9_epitope_Rep5 1199.69861997707 1199.69752993586 84.939 2 -0.5812758901289553 0.17162216022319648 0.989342942110854 ['ENST00000490967.5_1_22:31503065-31503518:-|nuORF'] 91872 21480 RKKQHRHFLVP True PC9_epitope_Rep1 1444.85276963304 1444.8516699358602 87.464 2 -0.5813281347334255 0.17166725121958995 0.9893689313265354 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 82194 12056 PNVLKVFL True NCI_RA007_Epitope_Rep5 928.57458868092 928.57348993586 53.031 2 -0.5814176360425845 0.1717387492228475 0.9894134453608182 ['ENSG00000147234|ENST00000683843|FRMPD3', 'ENST00000477796.1_1_X:106788951-106797806:+|nuORF'] 135843 10918 WPCQHHCFYF True PC9_epitope_Rep1 1366.5375686325403 1366.5364699358602 46.881 2 -0.5814271644105994 0.1717387492228475 0.9894181837134906 ['ENST00000501122.2_1_11:65211061-65211343:+|nuORF'] 33186 10846 GIWSKWAPP True PC9_epitope_Rep3 1040.5443511817998 1040.54324993586 46.693 2 -0.5814314758299076 0.1717387492228475 0.9894203276944572 ['ENSG00000091664|ENST00000263160|SLC17A6', 'SLC17A6|p.E210K|1|0.12|ENSG00000091664|chr11:22360951-22360951|G/A|missense_variant', 'ENST00000598018.1_1_19:49936751-49940072:-|nuORF', 'nc|ENSG00000104888|Q9P2U7-2|SLC17A7', 'nc|ENSG00000104888|Q9P2U7-3|SLC17A7', 'ENSG00000104888|ENST00000221485|SLC17A7'] 70177 4828 LVQAAAVST True NCI_RA007_Epitope_Rep1 858.4810822189 858.47998993586 22.86 2 -0.5814710936888836 0.17174373933974144 0.9894400276689621 ['ENSG00000151838|ENST00000537690|CCDC175'] 55192 19477 LAATTLQP True PC9_epitope_Rep5 813.45961849833 813.45852993586 79.971 2 -0.5814782206486504 0.17174373933974144 0.9894435713230036 ['ENST00000441248.5_1_X:148622580-148622637:+|nuORF'] 19537 10882 ELPSGAEILE True PC9_epitope_Rep1 1056.5339056373998 1056.53280993586 46.742 2 -0.5814832265387738 0.17174373933974144 0.9894460603015208 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 3187 5772 AGEEPPAQPP True H1975_Epitope_Rep2 991.4610750503098 991.45996993586 27.196 2 -0.581503220861338 0.17174373933974144 0.9894560013399504 ['ENSG00000128815|ENST00000325239|WDFY4'] 56956 20885 LDQRYLLVP True PC9_epitope_Rep1 1115.63389446219 1115.63278993586 85.154 2 -0.5815685786092522 0.1717514664626371 0.9894884929876305 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000601803.5_1_19:19032987-19035509:+|nuORF', 'nc|ENSG00000105671|Q9Y6V7-2|DDX49', 'ENST00000595858.5_1_19:19032475-19037138:+|nuORF'] 67386 21172 LSSLPPVYRI True PC9_epitope_Rep1 1143.66519459047 1143.6640899358601 86.271 2 -0.5816307964515997 0.1717514664626371 0.9895194183202589 ['ENST00000564648.1_1_16:85839106-85840477:+|nuORF', 'ENST00000568339.5_1_16:85839106-85839475:+|nuORF'] 113661 10679 TLWFFWDQRRE True H1975_Epitope_Rep3 1582.7680965192196 1582.76698993586 46.151 2 -0.5816816069698115 0.1717514664626371 0.9895446697826106 ['ENST00000343348.10_1_5:115814322-115814382:-|nuORF'] 22438 7772 ETERKMYSLRE True H1975_Epitope_Rep3 1440.7031133041598 1440.70147490379 34.88 3 -0.5817491606063344 0.17179654749191067 0.9895782367500859 ['ENSG00000164256|ENST00000296682|PRDM9'] 94192 18535 RRPLLRALF True H1975_Epitope_Rep2 1140.7243812324398 1140.72274490379 76.918 3 -0.5817667734589201 0.17180700999378376 0.9895869874564749 ['ENST00000527418.5_1_1:155023541-155024009:+|nuORF'] 126242 6967 VLGSASISVAL True NCI_RA007_Epitope_Rep4 1015.59136094387 1015.59026993586 33.424 2 -0.5817760720398665 0.17180700999378376 0.9895916071622443 ['ENST00000371975.8_1_1:46713425-46713950:+|nuORF'] 82056 6085 PLYMCGLLPAK True NCI_RA007_Epitope_Rep5 1204.63482306232 1204.63318490379 30.087 3 -0.5818125784692728 0.17182021039209436 0.9896097431064322 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 40099 8376 HPVMRRNPF True NCI_RA007_Epitope_Rep3 1152.59746646716 1152.5958149037901 40.047 3 -0.5818545446073303 0.1718466099263651 0.9896305891623819 ['ENSG00000171310|ENST00000303694|CHST11'] 128225 18389 VPNKFLVTAEI True PC9_epitope_Rep4 1229.7019740220098 1229.70086993586 78.799 2 -0.5818794646533104 0.1718466099263651 0.9896429667108659 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 12464 14539 DIYMWDFV True PC9_epitope_Rep4 1087.46846892987 1087.46736993586 63.838 2 -0.5820641950409897 0.1718675294042648 0.9897346947089728 ['ENST00000586768.1_1_16:4574125-4574218:-|nuORF'] 96954 12092 SAVVVQLSV True PC9_epitope_Rep2 900.5280324113199 900.52692993586 51.821 2 -0.5820685963145683 0.1718675294042648 0.9897368796107339 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 25511 13546 FEGPGCGR True NCI_RA007_Epitope_Rep2 821.3490225035299 821.3484749679301 57.334 1 -0.582082680928414 0.1718675294042648 0.989743871390886 ['ENST00000263974.4_1_1:28969267-28969489:-|nuORF'] 91130 13670 RFVEKYTEL True PC9_epitope_Rep5 1183.62372370131 1183.62262993586 57.607 2 -0.5820954880803759 0.1718675294042648 0.9897502287943937 ['ENSG00000181610|ENST00000313608|MRPS23'] 49458 5801 KEYHFHTHREL True NCI_RA007_Epitope_Rep5 1495.7320453636696 1495.7303849037899 29.0 3 -0.5821385108497461 0.1718966643823609 0.9897715834810694 ['ENST00000394480.6_1_15:88690622-88799253:-|nuORF'] 83189 18583 PSTHFLSIVI True PC9_epitope_Rep5 1112.62299542532 1112.62188993586 76.504 2 -0.5822045793813244 0.17190986166889782 0.9898043723411925 ['ENSG00000134115|ENST00000446702|CNTN6'] 84139 17693 PYDQSGFVSAI True PC9_epitope_Rep4 1182.5557037111398 1182.55460993586 76.081 2 -0.582260979638881 0.17192305853479736 0.9898323584134319 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000595934.1_1_19:50360240-50360429:+|nuORF', 'ENST00000498792.1_1_3:120025975-120026458:+|nuORF', 'ENST00000596424.1_1_19:50360315-50362048:+|nuORF', 'nc|ENSG00000104960|Q86YD1-3|PTOV1'] 137371 16591 YDRYLKLW True PC9_epitope_Rep5 1155.6076797143498 1155.60604490379 68.823 3 -0.5823584433501179 0.17198132300680466 0.9898807104825872 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 18073 9272 EIGPSRFRAP True PC9_epitope_Rep1 1128.60399131624 1128.60288993586 40.517 2 -0.582370291914408 0.17198132300680466 0.9898865877426605 ['ENSG00000138107|ENST00000369905|ACTR1A'] 98851 7886 SGTSDPYVKI True H1975_Epitope_Rep1 1065.5342399905699 1065.5331499358601 35.285 2 -0.5824134366537503 0.1719890365554387 0.9899079873309075 ['ENSG00000170743|ENST00000318881|SYT9'] 53600 24179 KRRRPRYRKRL True NCI_RA007_Epitope_Rep5 1584.0073132118298 1584.0062099358602 100.41 2 -0.5824244246885104 0.1719890365554387 0.9899134369543695 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3'] 102266 7148 SLSKLTAP True PC9_epitope_Rep3 815.47526856247 815.47416993586 32.508 2 -0.5824453640742538 0.1719890365554387 0.9899238216096164 ['ENST00000483035.5_1_6:118886676-118973579:-|nuORF', 'nc|ENSG00000111860|Q5SZL2-3|CEP85L', 'nc|ENSG00000111860|Q5SZL2-5|CEP85L', 'nc|ENSG00000111860|Q5SZL2-2|CEP85L', 'ENSG00000111860|ENST00000368491|CEP85L', 'nc|ENSG00000111860|Q5SZL2-4|CEP85L'] 62236 14546 LLFALSLLK True NCI_RA007_Epitope_Rep5 1016.66340368532 1016.66230993586 62.626 2 -0.5824585572424278 0.1720044614404079 0.9899303643194832 ['ENST00000490035.6_1_3:116164040-116164325:-|nuORF'] 11333 13873 DELTPWIPV True H1975_Epitope_Rep2 1068.54916177872 1068.5480699358602 58.507 2 -0.5824649688440585 0.1720044614404079 0.9899335438562539 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44', 'ENSG00000155275|ENST00000389737|TRMT44', 'nc|ENSG00000155275|Q8IYL2-3|TRMT44', 'ENST00000532477.1_1_4:8456189-8477725:+|nuORF'] 23014 16042 EVFRAELL True PC9_epitope_Rep3 975.5389314481898 975.53782993586 66.855 2 -0.5824763931010298 0.1720044614404079 0.9899392090538185 ['ENSG00000113248|ENST00000231173|PCDHB15'] 135746 22049 WLWWQPWWWWK True PC9_epitope_Rep3 1786.85612367798 1786.85502993586 90.108 2 -0.5824880424581712 0.1720044614404079 0.9899449857008673 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 126495 19002 VLLLGDVATL True PC9_epitope_Rep3 1012.61684741572 1012.61574993586 78.312 2 -0.5825211071866128 0.1720044614404079 0.989961380768921 ['nc|ENSG00000123191|P35670-2|ATP7B', 'nc|ENSG00000123191|P35670-3|ATP7B', 'nc|ENSG00000123191|P35670-4|ATP7B', 'ENSG00000123191|ENST00000242839|ATP7B'] 83627 16181 PVDNLVIK True PC9_epitope_Rep3 896.53311779176 896.53256496793 67.378 1 -0.5825296759321098 0.1720044614404079 0.9899656293281328 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 20587 6141 EPSLFFQDP True H1975_Epitope_Rep2 1078.4971262058598 1078.4960299358602 28.6 2 -0.5825397315931766 0.1720176542757445 0.9899706150081632 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'TRIOBP|p.A1541Gfs*12|1|0.18|ENSG00000100106|chr22:37734951-37734952|-/G|frameshift_variant', 'nc|ENSG00000100106|Q9H2D6-4|TRIOBP', 'ENST00000492485.5_1_22:38106528-38122511:+|nuORF'] 66849 10498 LSNALFQLIP True H1975_Epitope_Rep3 1114.63864548946 1114.63754993586 45.443 2 -0.5826019214623733 0.1720308466906727 0.9900014463285035 ['nc|ENSG00000104635|Q15043-3|SLC39A14'] 80943 21670 PIEEAYAIL True PC9_epitope_Rep2 1017.5382627418497 1017.53716993586 88.83 2 -0.5827136703544962 0.17204849218613097 0.9900568344297267 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant', 'DNAH8|p.A1622Qfs*38|1|0.24|ENSG00000124721|chr6:38852742-38852742|G/-|frameshift_variant'] 9262 19284 AVPGPGGIWSV True PC9_epitope_Rep6 1038.5498304850598 1038.5487299358601 86.822 2 -0.582716176745755 0.17204849218613097 0.9900580765311467 ['ENSG00000185085|ENST00000330574|INTS5'] 75343 9999 NIQHFRVLF True PC9_epitope_Rep6 1172.6454622053998 1172.6438249037901 49.021 3 -0.5827396574633774 0.17204849218613097 0.9900697125597829 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF', 'nc|ENSG00000157426|Q4L235-3|AASDH', 'nc|ENSG00000157426|Q4L235-4|AASDH', 'nc|ENSG00000157426|Q4L235-2|AASDH', 'ENSG00000157426|ENST00000205214|AASDH'] 18556 19521 EKLTATIW True PC9_epitope_Rep1 960.5280324113199 960.52692993586 79.908 2 -0.5827531146287588 0.17204849218613097 0.9900763810268752 ['ENSG00000186416|ENST00000688521|NKRF', 'NKRF|p.L406Ffs*41|1|0.46|ENSG00000186416|chrX:119590207-119590208|-/A|frameshift_variant', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 25901 12376 FFLRHLSIT True NCI_RA007_Epitope_Rep1 1132.6393141958 1132.63820993586 52.113 2 -0.5827580786579138 0.17204849218613097 0.9900788408069635 ['ENSG00000150261|ENST00000279783|OR8K1', 'OR8K1|p.G78Vfs*11|1|0.28|ENSG00000150261|chr11:56346267-56346267|C/-|frameshift_variant', 'OR8K1|p.L77H|1|0.28|ENSG00000150261|chr11:56346268-56346268|T/A|missense_variant'] 138730 20264 YIQDIILPT True PC9_epitope_Rep2 1074.5961119711399 1074.5950099358602 83.366 2 -0.582777263611747 0.17204849218613097 0.9900883470519792 ['nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B'] 44582 19960 ILPSQPGLV True PC9_epitope_Rep5 922.5487678558999 922.54766993586 81.83 2 -0.5828087355375524 0.17204849218613097 0.9901039405236679 ['nc|ENSG00000116133|Q15392-2|DHCR24', 'ENSG00000116133|ENST00000371269|DHCR24'] 82582 14429 PPYEQVVK True H1975_Epitope_Rep1 958.5123823471798 958.5118349679301 60.696 1 -0.5828128336093978 0.17204849218613097 0.990105970910981 ['EGFR-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'ZNF679-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 42583 8909 IEFWERRVLKI True NCI_RA007_Epitope_Rep2 1487.8612686280696 1487.86016993586 39.281 2 -0.5828345686876131 0.17204849218613097 0.9901167391797769 ['ENSG00000010379|ENST00000343164|SLC6A13', 'nc|ENSG00000010379|Q9NSD5-2|SLC6A13'] 130372 13184 VSKYSQAVP True PC9_epitope_Rep3 977.5181960036098 977.51708993586 55.747 2 -0.5828410336320932 0.17204849218613097 0.9901199420069267 ['ENSG00000117984|ENST00000236671|CTSD'] 10988 12386 DALMSSVP True PC9_epitope_Rep2 818.3844049527399 818.38330993586 52.952 2 -0.5828437730457252 0.17204849218613097 0.9901212991358321 ['ENSG00000102595|ENST00000376747|UGGT2', 'ENST00000463054.1_1_13:96529939-96547453:-|nuORF'] 62848 7030 LLMCRDIP True NCI_RA007_Epitope_Rep1 959.4932442090699 959.49214993586 31.342 2 -0.5829814825710896 0.17206168158791857 0.9901895091348916 ['ENST00000312629.9_1_11:67201493-67201693:+|nuORF'] 6510 6948 APTAITEA True PC9_epitope_Rep6 772.3966838886 772.39558993586 35.671 2 -0.583049798392404 0.17209080047789727 0.9902233381305248 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 138970 6379 YKLSVTTF True PC9_epitope_Rep4 957.51713337445 957.51602993586 31.623 2 -0.5830643812791373 0.17210398878552313 0.9902305585869002 ['nc|ENSG00000151490|Q16827-5|PTPRO', 'PTPRO|p.L896Ffs*14|1|0.57|ENSG00000151490|chr12:15560251-15560251|C/-|frameshift_variant', 'nc|ENSG00000151490|Q16827-2|PTPRO', 'ENSG00000151490|ENST00000281171|PTPRO'] 42449 10657 IEDYDGKLNK True H1975_Epitope_Rep1 1193.5928174958497 1193.59172993586 45.948 2 -0.5830816390115636 0.17211717667298532 0.9902391030931831 ['FAM184A|p.E249D|1|0.22|ENSG00000111879|chr6:119024226-119024226|T/G|missense_variant'] 19054 16330 ELFMRGLCL True PC9_epitope_Rep5 1080.5460080579198 1080.54490993586 67.809 2 -0.5831721400509433 0.17216222243461085 0.9902839049795195 ['ENST00000275262.11_1_6:163986120-163986207:+|nuORF'] 138209 8891 YGRYDKTQL True PC9_epitope_Rep4 1142.5720224816198 1142.57038490379 41.731 3 -0.5831943275036267 0.17217540897433856 0.9902948871198171 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENST00000463392.5_1_2:172180771-172183527:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'ENST00000464491.5_1_2:172180771-172182690:-|nuORF', 'ENST00000470773.1_1_2:172182447-172182657:-|nuORF'] 96456 15744 SAALIVFG True NCI_RA007_Epitope_Rep2 776.4432401582 776.44269496793 65.958 1 -0.5832029300726134 0.17218859509397896 0.9902991449708715 ['ENSG00000205116|ENST00000378821|TMEM88B'] 130060 5144 VSDDMRRHFRM True H1975_Epitope_Rep1 1448.6765217168402 1448.6754299358602 24.854 2 -0.5832394150786371 0.1722017807935522 0.990317202215991 ['RRP12|p.L992V|1|0.73|ENSG00000052749|chr10:97367114-97367114|G/C|missense_variant'] 81595 21295 PLKYLDTP True PC9_epitope_Rep2 945.5171333744499 945.51658496793 87.374 1 -0.5832689124637992 0.17221717871533918 0.9903317998912472 ['TET3|p.K1103Rfs*79|1|0.42|ENSG00000187605|chr2:74099315-74099315|A/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 110658 6063 TFYIAPSPGCR True NCI_RA007_Epitope_Rep1 1210.5804789903398 1210.57938993586 27.623 2 -0.5832936406349997 0.17221717871533918 0.990344036522963 ['ENST00000532245.5_1_11:57529333-57563148:+|nuORF'] 16382 11745 EEIRKLAE True PC9_epitope_Rep5 986.5396597241798 986.53856993586 50.177 2 -0.5833101731133448 0.17221717871533918 0.9903522171166792 ['ENSG00000089154|ENST00000300648|GCN1', 'ENST00000548132.1_1_12:120592933-120593466:-|nuORF'] 96590 7202 SAGETPGWL True PC9_epitope_Rep2 916.4290466460399 916.4279499358599 33.093 2 -0.5833153649194441 0.17221717871533918 0.9903547860522206 ['ENSG00000146409|ENST00000275227|SLC18B1'] 20502 10599 EPLVLDGK True PC9_epitope_Rep3 869.4858332461699 869.48472993586 45.716 2 -0.5833640060551154 0.17221717871533918 0.990378852303255 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2'] 137753 6746 YENFRLWQHYK True NCI_RA007_Epitope_Rep1 1582.76809651922 1582.76589987172 30.25 4 -0.583383245918233 0.17221717871533918 0.9903883708118603 ['nc|ENSG00000188152|Q5VZR2-2|NUTM2G', 'nc|ENSG00000188199|A6NNL0-2|NUTM2B', 'nc|ENSG00000184923|Q8IVF1-2|NUTM2A', 'ENSG00000188152|ENST00000372322|NUTM2G', 'ENSG00000130950|ENST00000253262|NUTM2F', 'ENSG00000214562|ENST00000381697|NUTM2D', 'ENSG00000228570|ENST00000429984|NUTM2E', 'ENSG00000188199|ENST00000429828|NUTM2B', 'ENSG00000184923|ENST00000381707|NUTM2A'] 977 11043 ADVWSFGVL True PC9_epitope_Rep3 992.4967322830398 992.49562993586 47.47 2 -0.5834325243421487 0.17230999554054915 0.9904127481131985 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF'] 31538 4521 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 22.511 2 -0.5835260371594112 0.1723550303397092 0.9904589990650398 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 3720 9260 AGSCSAGPR True NCI_RA007_Epitope_Rep1 804.35483615996 804.3542849679301 40.016 1 -0.5835410829741893 0.1723841376015289 0.9904664396156163 ['ENST00000361906.7_1_22:38616163-38616313:-|nuORF'] 101047 5765 SLGELGLVDLD True NCI_RA007_Epitope_Rep3 1129.58666948625 1129.5855699358601 29.659 2 -0.5835672807352992 0.172397318086987 0.9904793944156537 ['ENST00000379619.5_1_2:28635552-28635666:+|nuORF'] 78290 7421 NYIKRNWRI True NCI_RA007_Epitope_Rep4 1261.7043740638499 1261.70272490379 35.186 3 -0.5835999453700292 0.17240775245648401 0.9904955458758872 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L', 'CSE1L|p.E78K|1|0.36|ENSG00000124207|chr20:49066195-49066195|G/A|missense_variant'] 103311 16001 SPLSSPLAQA True PC9_epitope_Rep2 969.5131106231698 969.51200993586 66.804 2 -0.5836123793560613 0.17240775245648401 0.9905016936718086 ['ENST00000394540.3_1_11:64010007-64010954:+|nuORF', 'ENST00000541388.1_1_11:64010007-64011498:+|nuORF'] 75934 11118 NLSKEKTEWHV True NCI_RA007_Epitope_Rep1 1369.6990138998901 1369.69790993586 47.247 2 -0.5836855960993743 0.17242093193617225 0.9905378906399688 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 44539 20644 ILMHCQTTL True PC9_epitope_Rep1 1058.5252726133401 1058.52416993586 84.228 2 -0.5836924455334762 0.17242477312529852 0.9905412765251985 ['GAD2|p.G368Vfs*5|1|0.14|ENSG00000136750|chr10:26273643-26273643|G/-|frameshift_variant', 'ENSG00000136750|ENST00000376261|GAD2'] 88190 21611 QRWKRIRQRWK True H1975_Epitope_Rep2 1639.9647796935099 1639.96257987172 89.404 4 -0.5836933912032176 0.17242477312529852 0.9905417439940888 ['ENSG00000267796|ENST00000301159|LIN37', 'ENST00000595455.1_1_19:36244761-36245372:+|nuORF'] 55971 7093 LARTEAKI True PC9_epitope_Rep4 900.5392658013599 900.53816993586 34.551 2 -0.583729004888091 0.17242477312529852 0.9905593479322472 ['ENSG00000196739|ENST00000356083|COL27A1', 'nc|ENSG00000196739|Q8IZC6-3|COL27A1', 'COL27A1|p.P455S|1|0.05|ENSG00000196739|chr9:114168918-114168918|C/T|missense_variant'] 117830 14710 TVYDRTTVL True PC9_epitope_Rep2 1066.5658744720201 1066.56476993586 61.85 2 -0.5837293901224925 0.17242477312529852 0.9905595383458485 ['ENSG00000188786|ENST00000373036|MTF1'] 41176 12543 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep1 1121.48115925233 1121.48006993586 53.117 2 -0.5838146566331038 0.17242477312529852 0.990601679218583 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 78958 11334 PAIAIATA True PC9_epitope_Rep4 726.4275900940601 726.4270449679301 51.375 1 -0.5838237578366037 0.17242477312529852 0.99060617671587 ['TCERG1L|p.M585*|1|0.24|ENSG00000176769|chr10:131093170-131093170|T/-|frameshift_variant', 'ENSG00000176769|ENST00000368642|TCERG1L', 'TCERG1L|p.H388Tfs*27|1|0.08|ENSG00000176769|chr10:131146533-131146533|G/-|frameshift_variant'] 80045 5650 PFHDSEVR True NCI_RA007_Epitope_Rep4 985.46174375665 985.46064993586 28.337 2 -0.5838295421932826 0.17242477312529852 0.9906090350879618 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF'] 123687 14657 VGRAGPRP True NCI_RA007_Epitope_Rep3 808.4667695674399 808.46566993586 65.028 2 -0.5838520306546198 0.17242477312529852 0.9906201474782431 ['ENSG00000112164|ENST00000373256|GLP1R', 'GLP1R|p.G248Afs*23|1|0.06|ENSG00000112164|chr6:39073687-39073687|G/-|frameshift_variant'] 33716 13198 GLHSKVIL True PC9_epitope_Rep5 865.53853752537 865.53744993586 55.773 2 -0.5838883048415112 0.17242477312529852 0.9906380705392454 ['ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A', 'ENST00000487668.5_1_22:20100432-20101310:-|nuORF', 'ENST00000487378.1_1_22:20100088-20100785:-|nuORF'] 136661 9465 WWRWRRARWQP True PC9_epitope_Rep4 1682.8807157163799 1682.87908490379 44.016 3 -0.5838968477091394 0.17242477312529852 0.9906422913195403 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 79373 15860 PASKQDRHML True PC9_epitope_Rep3 1181.59752603681 1181.59588490379 66.157 3 -0.5838997344984816 0.17242477312529852 0.990643717576134 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 113053 15217 TLNMIRQIYP True H1975_Epitope_Rep2 1247.66962834791 1247.66852993586 63.688 2 -0.5839231494545047 0.17242477312529852 0.9906552856471348 ['nc|ENSG00000198130|Q6NVY1-2|HIBCH', 'ENSG00000198130|ENST00000359678|HIBCH'] 123884 12043 VGRRRIKL True NCI_RA007_Epitope_Rep5 996.6668663563198 996.66576993586 52.983 2 -0.5840157569508007 0.17242477312529852 0.9907010310412142 ['ENSG00000170340|ENST00000301998|B3GNT2'] 81960 15378 PLTIEGFAY True H1975_Epitope_Rep3 1009.5120479940099 1009.5114749679301 64.562 1 -0.5840278498061939 0.17242477312529852 0.9907070037299686 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'HNRNPUL1|p.L363Ffs*44|1|0.14|ENSG00000105323|chr19:41292331-41292332|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1', 'ENST00000594207.1_1_19:41774132-41786840:+|nuORF'] 22769 5329 ETVTLHICP True H1975_Epitope_Rep2 1011.5059170677498 1011.50480993586 25.551 2 -0.5841195199112081 0.17242477312529852 0.9907522735338729 ['nc|ENSG00000154358|Q5VST9-3|OBSCN'] 60143 7546 LGNCQDEKQDR True NCI_RA007_Epitope_Rep5 1304.5779127910398 1304.5762649037902 35.712 3 -0.5841262019870657 0.17242477312529852 0.9907555729343073 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 64525 15971 LPRNAIEL True PC9_epitope_Rep4 924.5392658013599 924.53816993586 69.362 2 -0.5842207188071495 0.17243794876693572 0.9908022360097622 ['nc|ENSG00000170820|P23945-2|FSHR', 'nc|ENSG00000170820|P23945-3|FSHR', 'ENSG00000170820|ENST00000406846|FSHR', 'nc|ENSG00000170820|P23945-4|FSHR', 'FSHR|p.Q145Kfs*11|1|0.17|ENSG00000170820|chr2:48990579-48990579|G/-|frameshift_variant'] 113616 17840 TLVPASLFSL True PC9_epitope_Rep5 1046.6011973515801 1046.60010993586 73.639 2 -0.584300226958713 0.17253072661274915 0.9908414799933599 ['ENST00000451963.1_2_7:99818046-99818860:+|nuORF'] 29094 19440 FTIRDLQRL True PC9_epitope_Rep5 1160.6665915728 1160.66494490379 79.827 3 -0.584335328931823 0.17255707326392206 0.9908588030560421 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 57113 21244 LDTAGEKFF True PC9_epitope_Rep3 1026.5022115862998 1026.50110993586 87.008 2 -0.584346968039457 0.17255707326392206 0.9908645466647806 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 4288 9746 AIGRYYSRREP True NCI_RA007_Epitope_Rep1 1366.7105816430999 1366.7094899358601 41.911 2 -0.5843968808730844 0.17257024596035977 0.9908891753029834 ['DEPDC7|p.S312R|1|0.42|ENSG00000121690|chr11:33031531-33031531|T/A|missense_variant'] 98230 16052 SETYWIYICI True H1975_Epitope_Rep2 1289.6002113754098 1289.59910993586 66.946 2 -0.5845107705930236 0.17262842861008962 0.9909453594235903 ['ENST00000361727.7_1_7:148113442-148113583:+|nuORF'] 61202 19020 LILKPVTSP True PC9_epitope_Rep1 966.61136811246 966.61026993586 77.951 2 -0.5845254730376175 0.17262842861008962 0.9909526111309266 ['ENSG00000154175|ENST00000471714|ABI3BP'] 55478 6822 LAGDVAER True PC9_epitope_Rep5 829.4293809992099 829.42828993586 31.213 2 -0.5845777149555559 0.17266794014645018 0.9909783760487462 ['nc|ENSG00000132470|P16144-5|ITGB4'] 56539 10353 LDGINSGI True PC9_epitope_Rep1 787.40758292547 787.40648993586 44.704 2 -0.5845826099158008 0.17266794014645018 0.9909807899731731 ['nc|ENSG00000189001|Q6UWP8-2|SBSN', 'ENSG00000189001|ENST00000452271|SBSN'] 64500 9278 LPQSERITG True PC9_epitope_Rep5 999.53490869691 999.53380993586 40.636 2 -0.5846134058979335 0.17266794014645018 0.9909959760827991 ['ENST00000299237.2_1_16:58032340-58033481:-|nuORF'] 134117 6357 VYLAEKGEND True NCI_RA007_Epitope_Rep1 1136.5349682665599 1136.53333490379 28.754 3 -0.584705588781366 0.17271019706472254 0.9910414253084866 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 107657 9828 SVQLMEKRMDK True NCI_RA007_Epitope_Rep4 1363.69519147275 1363.6940899358601 44.652 2 -0.5847264628560531 0.17271019706472254 0.9910517152506032 ['CON__Q2UVX4'] 47237 9488 IVAYHGSYLW True NCI_RA007_Epitope_Rep2 1207.60259433391 1207.6014899358602 41.519 2 -0.5847767708727016 0.17272336564633972 0.9910765121987885 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000587300.1_1_19:39106832-39108535:-|nuORF', 'ENST00000588083.5_1_19:39104803-39108481:-|nuORF'] 58766 9523 LESFMETGK True H1975_Epitope_Rep1 1040.4848472699998 1040.48374993586 41.552 2 -0.584806170447639 0.1727282856096901 0.9910910016485084 ['nc|ENSG00000180228|O75569-3|PRKRA', 'nc|ENSG00000180228|O75569-2|PRKRA', 'ENSG00000180228|ENST00000325748|PRKRA'] 75337 9095 NIPSPAPTQLS True H1975_Epitope_Rep1 1123.58733819259 1123.58624993586 39.889 2 -0.5848208935472121 0.1727282856096901 0.9910982573967452 ['ENSG00000136002|ENST00000409359|ARHGEF4'] 116162 15095 TSTTTWLLY True H1975_Epitope_Rep1 1084.54407639828 1084.5429699358601 63.316 2 -0.5848290306652945 0.1727282856096901 0.9911022673480487 ['chr19:282809-287665|110|11.38|0.22|5.69|-|1|PLPP2,None|1'] 75358 7103 NISIHQAYQQC True H1975_Epitope_Rep1 1303.59791995963 1303.5968299358601 32.346 2 -0.5848390575337155 0.1727282856096901 0.9911072084325423 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 126988 21218 VLRSRLKVRVV True H1975_Epitope_Rep2 1323.88267277899 1323.88102490379 87.814 3 -0.5848506161066236 0.17274145285541478 0.9911129041374608 ['ENSG00000008130|ENST00000341426|NADK', 'nc|ENSG00000008130|O95544-2|NADK', 'ENST00000497615.1_1_1:1685693-1686165:-|nuORF', 'nc|ENSG00000008130|O95544-3|NADK'] 25323 16333 FDSIVGVAAY True H1975_Epitope_Rep3 1040.51786165044 1040.51676993586 68.299 2 -0.5848857076430615 0.17275187012573612 0.9911301949729316 ['ENSG00000196455|ENST00000356763|PIK3R4'] 94347 18873 RRRLLGPQP True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66648993586 77.555 2 -0.5849003189956409 0.17275187012573612 0.9911373939755554 ['ENST00000262435.13_1_17:62658063-62658153:-|nuORF'] 79551 11772 PDDLVAPVV True H1975_Epitope_Rep3 923.4963979298699 923.4958449679301 50.425 1 -0.5850994657011669 0.17284952653775762 0.9912354823489579 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 78204 13208 NYENKQYLF True PC9_epitope_Rep6 1217.57168812845 1217.5705899358602 62.454 2 -0.5851045568846707 0.17284952653775762 0.9912379892126064 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 62865 13316 LLMRWDLIEDK True H1975_Epitope_Rep1 1430.7591716282998 1430.75806993586 56.324 2 -0.5851193730375818 0.17284952653775762 0.9912452843655608 ['ENST00000427177.5_1_17:75495228-75495576:+|nuORF'] 135948 7141 WPWRWREWRPW True H1975_Epitope_Rep2 1739.8585832894696 1739.85694490379 32.401 3 -0.585137389778463 0.17284952653775762 0.9912541549798132 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF'] 28550 10256 FSEQLSHPM True PC9_epitope_Rep4 1074.4804305958999 1074.47932993586 47.131 2 -0.5851610266964615 0.17284952653775762 0.9912657919786878 ['nc|ENSG00000146147|Q5VWP3-2|MLIP'] 129914 24858 VRSVIKTS True PC9_epitope_Rep4 888.53926580136 888.5387149679301 104.13 1 -0.5852652470534966 0.1728571883255355 0.9913170921021325 ['CYP4F8|p.N112K|1|0.31|ENSG00000186526|chr19:15618137-15618137|T/G|missense_variant'] 64799 15913 LQCELCDGD True PC9_epitope_Rep5 994.3735825688599 994.37248993586 66.201 2 -0.58527057301835 0.1728571883255355 0.9913197132503752 ['ENSG00000177311|ENST00000321464|ZBTB38'] 16741 8700 EESQRKCPP True H1975_Epitope_Rep2 1072.4971432891998 1072.4960499358601 38.427 2 -0.5853078567124516 0.1728571883255355 0.9913380610442086 ['nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A'] 88191 23773 QRWKRIRQRWK True H1975_Epitope_Rep3 1639.9647796935099 1639.96257987172 99.145 4 -0.5853242108908561 0.1728703512150098 0.9913461084862195 ['ENSG00000267796|ENST00000301159|LIN37', 'ENST00000595455.1_1_19:36244761-36245372:+|nuORF'] 131219 15802 VTERQRQE True PC9_epitope_Rep3 1044.5312202988 1044.53012993586 65.937 2 -0.5853762631936658 0.1728835136855506 0.9913717192928604 ['ENST00000265361.7_1_7:80374618-80378283:-|nuORF'] 110435 8482 TFAAAVSGA True PC9_epitope_Rep6 793.39701824177 793.39646496793 42.34 1 -0.5854319534262274 0.17289392444543458 0.9913991154636195 ['nc|ENSG00000167930|Q9H0X4-2|FAM234A', 'ENSG00000167930|ENST00000399932|FAM234A'] 68914 10753 LTNRRRSI True PC9_epitope_Rep1 1014.60466002258 1014.60356993586 46.249 2 -0.5854363959520487 0.17289392444543458 0.9914013007088621 ['ENST00000296702.9_1_5:145890244-145890412:+|nuORF'] 4854 14334 ALELLEPIDQK True H1975_Epitope_Rep1 1267.70236794483 1267.7012699358602 60.326 2 -0.5854857335578327 0.17290708591251214 0.9914255674710982 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000465640.1_1_X:153670288-153671016:+|nuORF', 'ENST00000468483.5_1_X:153669954-153671016:+|nuORF', 'ENST00000460984.1_1_X:153670432-153670829:+|nuORF', 'ENST00000491154.1_1_X:153669954-153670603:+|nuORF'] 19019 14870 ELEVLAKKSP True PC9_epitope_Rep1 1112.6441247927198 1112.64302993586 62.016 2 -0.5855464239028181 0.17296523191980268 0.9914554129452366 ['ENST00000423095.7_1_2:85614321-85618082:+|nuORF', 'ENST00000410106.5_1_2:85598540-85618082:+|nuORF', 'ENSG00000115459|ENST00000409013|ELMOD3', 'ENST00000490508.5_1_2:85582731-85618082:+|nuORF', 'ENST00000446464.7_1_2:85617824-85618082:+|nuORF'] 28626 20690 FSILRRSPS True PC9_epitope_Rep5 1061.59817765981 1061.5970899358601 84.639 2 -0.5855490559771039 0.17296523191980268 0.991456707182055 ['PARP8|p.T285I|1|0.1|ENSG00000151883|chr5:50794323-50794323|C/T|missense_variant'] 79590 8089 PDIPDSRVP True H1975_Epitope_Rep2 994.5083595959 994.50726993586 36.061 2 -0.5856024441705566 0.1729887983706721 0.9914829567646025 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 129101 7375 VQQANQQLSRA True H1975_Epitope_Rep1 1241.64764703337 1241.64654993586 33.372 2 -0.5856301959230907 0.1729887983706721 0.9914965998237562 ['nc|ENSG00000079950|O15400-2|STX7', 'ENSG00000079950|ENST00000367941|STX7'] 81071 15454 PISDTIIP True H1975_Epitope_Rep3 854.4749342092999 854.4743849679301 64.858 1 -0.5856512576477335 0.1729887983706721 0.9915069531899446 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1'] 57020 8259 LDRQEWERQKK True PC9_epitope_Rep4 1514.7953738962199 1514.7937349037902 39.229 3 -0.5856935503539968 0.17299369948450327 0.9915277410239537 ['MTCL1|p.R1295L|1|0.63|ENSG00000168502|chr18:8819030-8819030|G/T|missense_variant'] 86550 19568 QLDLNRSRA True PC9_epitope_Rep1 1071.57850484439 1071.57740993586 80.093 2 -0.5857200553620654 0.17299369948450327 0.9915407674088997 ['ENST00000568299.2_1_16:34480765-34481439:-|nuORF'] 136699 13563 WWWWIWWQWW True PC9_epitope_Rep2 1747.7877097649898 1747.78660993586 57.461 2 -0.5857277338504403 0.17299369948450327 0.9915445409395981 ['chr12:54282841-54283827|531|24.4|0.0|21.22|+|1|HNRNPA1,HNRNPA1|1'] 79403 16400 PASWYETV True PC9_epitope_Rep5 951.4337976733099 951.43270993586 68.081 2 -0.5857376845273539 0.17299369948450327 0.9915494309804086 ['ENST00000467600.5_1_2:114386183-114392789:+|nuORF'] 130402 19230 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 79.813 2 -0.5857762409758883 0.17300135231882904 0.9915683772179867 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 64031 14239 LPAGSFTL True H1975_Epitope_Rep2 804.43815477776 804.43760496793 59.919 1 -0.5857825677468586 0.17300135231882904 0.9915714859024246 ['ENST00000392474.6_1_12:121675701-121675980:-|nuORF'] 130204 17297 VSERDKVKFTV True PC9_epitope_Rep1 1306.7245003717399 1306.72285490379 71.349 3 -0.585797786479913 0.17300135231882904 0.9915789634280073 ['nc|ENSG00000172803|Q86XE0-2|SNX32', 'ENST00000530101.5_1_11:65601488-65618753:+|nuORF', 'SNX32|p.S300Tfs*76|1|0.14|ENSG00000172803|chr11:65852536-65852537|CT/-|frameshift_variant', 'ENSG00000172803|ENST00000308342|SNX32', 'ENST00000531503.5_1_11:65603108-65617212:+|nuORF', 'ENST00000524729.1_1_11:65601488-65617212:+|nuORF', 'ENST00000533298.5_1_11:65601362-65617723:+|nuORF'] 129965 25106 VRVLRPLKA True PC9_epitope_Rep3 1050.7025831586998 1050.70148993586 101.92 2 -0.5858459262528215 0.1730062520880065 0.9916026138494861 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I', 'CACNA1I|p.T179N|1|0.24|ENSG00000100346|chr22:39619363-39619363|C/A|missense_variant', 'CACNA1I|p.I189M|1|0.2|ENSG00000100346|chr22:39619394-39619394|C/G|missense_variant'] 72216 16210 MHAGSLLL True PC9_epitope_Rep5 840.45275929608 840.45166993586 67.344 2 -0.5858531170033155 0.1730062520880065 0.9916061462509771 ['ENSG00000153201|ENST00000283195|RANBP2', 'RGPD4|p.F972Lfs*67|1|0.08|ENSG00000196862|chr2:107870918-107870927|TTTGCAGATG/-|frameshift_variant', 'ENSG00000196862|ENST00000408999|RGPD4', 'RANBP2|p.L369Kfs*5|1|0.07|ENSG00000153201|chr2:108748957-108748958|TT/-|frameshift_variant', 'RGPD4|p.V610Ffs*5|1|0.07|ENSG00000196862|chr2:107860831-107860831|G/-|frameshift_variant', 'RGPD4|p.M814Ifs*6|1|0.37|ENSG00000196862|chr2:107863005-107863005|G/-|frameshift_variant', 'RGPD3|p.H839Ifs*29|1|0.29|ENSG00000153165|chr2:106429736-106429736|G/-|frameshift_variant', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 28112 11747 FQYHRQLYHKC True NCI_RA007_Epitope_Rep2 1521.7299371886897 1521.72829490379 50.29 3 -0.5858653895623653 0.1730062520880065 0.9916121748613622 ['ENSG00000131187|ENST00000253496|F12'] 28101 14375 FQWIQYSI True PC9_epitope_Rep5 1083.53893144819 1083.5378299358601 60.293 2 -0.5858874179805459 0.1730062520880065 0.9916229952068726 ['ENSG00000162769|ENST00000366971|FLVCR1'] 95573 11321 RWSRRTLYVQ True NCI_RA007_Epitope_Rep4 1363.74730150499 1363.7462099358602 50.441 2 -0.5859100422660444 0.17301940820871778 0.9916341074320433 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 77634 13777 NTFLNIFRRKK True H1975_Epitope_Rep1 1435.8412018898296 1435.84010993586 58.136 2 -0.5859860367734506 0.17304847202558024 0.9916714271341931 ['ENSG00000152822|ENST00000282753|GRM1', 'nc|ENSG00000152822|Q13255-2|GRM1', 'nc|ENSG00000152822|Q13255-3|GRM1'] 84534 5279 QAQYQALER True NCI_RA007_Epitope_Rep3 1105.55162139021 1105.5505299358601 27.773 2 -0.5860513201581757 0.17306162705609113 0.991703479309941 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 59755 8716 LGEASLTLGIA True NCI_RA007_Epitope_Rep3 1043.58627556343 1043.5851699358602 41.37 2 -0.5860882097826321 0.17306927543148015 0.9917215879371363 ['ENST00000477269.5_1_13:113777169-113798523:+|nuORF'] 7117 5592 AQVLHVPS True PC9_epitope_Rep3 849.47085188837 849.46974993586 26.587 2 -0.586097935785012 0.17306927543148015 0.991726361932367 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 111833 18694 TILRLLQQV True PC9_epitope_Rep6 1082.68117900778 1082.68008993586 84.549 2 -0.5860985312112345 0.17306927543148015 0.9917266541915032 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 100694 11361 SLDPRFRQYTY True H1975_Epitope_Rep2 1444.7099129367598 1444.70880993586 48.749 2 -0.5861787166698592 0.17308456999252436 0.99176600712587 ['ENSG00000004139|ENST00000585482|SARM1', 'nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENST00000379061.8_1_17:26708312-26722930:+|nuORF'] 15645 5686 EATASITCR True PC9_epitope_Rep2 950.4491304676201 950.44802993586 27.258 2 -0.5861815269128761 0.17308456999252436 0.9917673861281041 ['ENST00000264254.10_1_2:101192950-101192995:+|nuORF'] 110654 12334 TFWYWNYNYY True H1975_Epitope_Rep2 1518.6244519772997 1518.62334993586 52.527 2 -0.5861893968853616 0.17308456999252436 0.9917712478990388 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 129909 25134 VRSVIKTS True NCI_RA007_Epitope_Rep5 888.53926580136 888.5387149679301 104.18 1 -0.5861895092122958 0.17308456999252436 0.991771303016775 ['CYP4F8|p.N112K|1|0.31|ENSG00000186526|chr19:15618137-15618137|T/G|missense_variant'] 80694 10050 PGWENCQRP True PC9_epitope_Rep1 1085.47126289453 1085.4701699358602 43.525 2 -0.5862539350305048 0.17308456999252436 0.9918029127016815 ['ENST00000590408.1_1_19:33980916-34002000:-|nuORF'] 91697 18788 RKAGGGGG True PC9_epitope_Rep6 658.3510711088599 658.35052496793 84.909 1 -0.5862612181066015 0.17308456999252436 0.9918064856148 ['ENST00000320225.9_2_16:2314685-2318195:-|nuORF', 'ENST00000301730.12_3_16:2314685-2318093:-|nuORF'] 131119 16833 VTEEKANII True PC9_epitope_Rep4 1015.5549754351498 1015.55386993586 72.725 2 -0.5863115630642939 0.17312402582943665 0.9918311813032452 ['ENSG00000135220|ENST00000251566|UGT2A3'] 96266 14887 RYQQWMERF True PC9_epitope_Rep2 1342.6240751378198 1342.62296993586 62.528 2 -0.5863162122541258 0.17312402582943665 0.9918334616549961 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 22906 11420 EVEASLGIP True H1975_Epitope_Rep2 913.4756624852898 913.47456993586 48.979 2 -0.5863181456444341 0.17312402582943665 0.9918344099407661 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.I755Sfs*38|1|0.15|ENSG00000121871|chr3:165188569-165188569|G/-|frameshift_variant'] 107751 20064 SVSPPVSIVA True PC9_epitope_Rep3 954.53859709502 954.53750993586 82.426 2 -0.5864285449047395 0.1731530815109344 0.9918885479747113 ['UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 81364 11135 PLDEPGLGV True PC9_epitope_Rep5 895.4650978015899 895.46400993586 47.815 2 -0.5864808347693047 0.1731607239416012 0.9919141829221028 ['ENSG00000103269|ENST00000352681|RHBDL1', 'nc|ENSG00000103269|O75783|RHBDL1', 'ENST00000450775.2_1_16:725790-727700:+|nuORF'] 19229 13441 ELIRNVCRDD True H1975_Epitope_Rep1 1231.59791995963 1231.5968299358601 56.814 2 -0.5865357944789248 0.1731607239416012 0.9919411217535999 ['ENSG00000115526|ENST00000264249|CHST10'] 100916 14481 SLFAVVPK True PC9_epitope_Rep3 859.51673945163 859.51564993586 60.811 2 -0.5865659138028005 0.1731607239416012 0.9919558827383917 ['ENST00000404569.5_3_22:39905450-39907313:+|nuORF'] 83623 10831 PVDNLVIK True NCI_RA007_Epitope_Rep4 896.53311779176 896.53256496793 48.513 1 -0.5866400328688345 0.17320017175299374 0.9919922006600027 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 66586 17049 LSIPMFLL True PC9_epitope_Rep5 932.5405116713199 932.53940993586 70.597 2 -0.5866435420686628 0.17320017175299374 0.991993919914085 ['KCNN3|p.R414L|1|0.21|ENSG00000143603|chr1:154772182-154772182|C/A|missense_variant'] 27013 9794 FLERYIYNREE True NCI_RA007_Epitope_Rep2 1530.7466923682998 1530.7455899358602 42.72 2 -0.5866570815804525 0.17320017175299374 0.992000553096743 ['ENST00000469120.1_1_6:33043797-33048717:+|nuORF', 'ENST00000471184.5_1_6:33048250-33051373:+|nuORF', 'ENSG00000223865|ENST00000418931|HLA-DPB1'] 36709 22161 GVITYAIGV True PC9_epitope_Rep4 891.5065686907499 891.50546993586 93.465 2 -0.5867613883699458 0.1732451257911644 0.9920516437245791 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'VIT|p.A644D|1|0.18|ENSG00000205221|chr2:36814255-36814255|C/A|missense_variant'] 20460 13402 EPIEYYWQRIR True H1975_Epitope_Rep3 1551.78341223019 1551.7823099358602 56.818 2 -0.586830939445307 0.17330598094874608 0.9920857001073996 ['CLMP|p.V163E|1|0.12|ENSG00000166250|chr11:123083748-123083748|A/T|missense_variant'] 86431 13849 QKKKKKKKK True PC9_epitope_Rep1 1170.8288463009796 1170.82720490379 58.112 3 -0.5869002416493375 0.173364077283931 0.9921196262039186 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 8074 3803 ATDRSSPAL True PC9_epitope_Rep4 916.4614094034799 916.46030993586 20.791 2 -0.5869004123336153 0.173364077283931 0.9921197097500193 ['PCDHB11|p.G537S|1|0.19|ENSG00000197479|chr5:141201383-141201383|G/A|missense_variant'] 113728 7883 TLYWRIYRETE True H1975_Epitope_Rep3 1528.7674278128795 1528.76578490379 35.297 3 -0.5869832119028782 0.1733772222752282 0.9921602322037782 ['CHRM1|p.A248Gfs*2|1|0.23|ENSG00000168539|chr11:62910358-62910359|-/C|frameshift_variant', 'nc|ENSG00000168539|P11229-2|CHRM1', 'ENSG00000168539|ENST00000306960|CHRM1'] 85678 9156 QGSGASRDP True PC9_epitope_Rep1 873.39405811965 873.39296993586 40.07 2 -0.5871279604700699 0.17345397299918902 0.9922310434760034 ['ENST00000349155.6_3_12:115121317-115121416:-|nuORF'] 111966 18273 TIQSDKFLN True PC9_epitope_Rep2 1064.5502244078798 1064.54912993586 75.608 2 -0.5871409652983605 0.17345608344463526 0.9922374036260001 ['ENSG00000136052|ENST00000258538|SLC41A2'] 17218 8854 EGVVEC[Carbamidomethyl]SFVK True NCI_RA007_Epitope_Rep1 1152.5485104351499 1152.54740993586 38.44 2 -0.5871613382144416 0.17345608344463526 0.9922473666060346 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 59407 12790 LFLPNYVQD True NCI_RA007_Epitope_Rep5 1107.5600608155898 1107.5589699358602 55.877 2 -0.5871778634584937 0.17345608344463526 0.9922554474071145 ['ENSG00000171798|ENST00000304613|KNDC1'] 114863 20046 TQPLSHSNQMP True PC9_epitope_Rep1 1238.57137085862 1238.57026993586 81.933 2 -0.5871906882548839 0.17345608344463526 0.992261718359292 ['ENSG00000116128|ENST00000234739|BCL9'] 84076 4203 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 21.124 2 -0.5872110560985195 0.17345608344463526 0.9922716770310607 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 107643 6921 SVQEYFVRK True NCI_RA007_Epitope_Rep4 1154.6084079903396 1154.6067749037902 33.241 3 -0.5872423224332958 0.17346922550999316 0.99228696295918 ['ENSG00000163781|ENST00000260810|TOPBP1'] 42724 19486 IEKWESLEVL True PC9_epitope_Rep6 1244.66525416012 1244.66414993586 87.615 2 -0.5872514742583093 0.1734796088719294 0.9922914368973818 ['ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 120876 7575 VEMYDLRWDRW True PC9_epitope_Rep1 1567.7241831019098 1567.7225249037901 33.955 3 -0.5872915691613861 0.1734796088719294 0.9923110357960108 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 121989 10837 VFVAIGEFIY True H1975_Epitope_Rep1 1156.6168474157198 1156.61574993586 46.646 2 -0.5873405359918086 0.17353492956850775 0.99233496742981 ['nc|ENSG00000171189|P39086-2|GRIK1', 'nc|ENSG00000171189|P39086|GRIK1', 'ENSG00000171189|ENST00000327783|GRIK1'] 79537 16417 PDASLFDAVYS True H1975_Epitope_Rep1 1183.5397192938299 1183.5386299358602 68.509 2 -0.5873450312091947 0.17353492956850775 0.99233716416459 ['ENSG00000106617|ENST00000287878|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-2|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-3|PRKAG2', 'ENST00000488258.5_1_7:151265789-151372578:-|nuORF'] 55370 5496 LAEPM[Oxidation]TYKLM[Oxidation] True NCI_RA007_Epitope_Rep1 1227.58793320043 1227.5868299358601 25.449 2 -0.5873462209606185 0.17353492956850775 0.9923377455692858 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 27000 12109 FLEPGRRGL True H1975_Epitope_Rep3 1043.58761297611 1043.58650993586 51.742 2 -0.5873813773364265 0.17354531001589826 0.9923549245262807 ['ENSG00000176020|ENST00000320431|AMIGO3'] 121540 12335 VFAWEQNEY True H1975_Epitope_Rep1 1184.51383889916 1184.51274993586 52.476 2 -0.587388708419966 0.17354531001589826 0.9923585065314375 ['MYO3A|p.K1368Rfs*19|1|0.31|ENSG00000095777|chr10:26174366-26174366|A/-|frameshift_variant', 'MYO3A|p.N1110Kfs*11|1|0.19|ENSG00000095777|chr10:26170465-26170466|-/A|frameshift_variant', 'ENSG00000095777|ENST00000642920|MYO3A'] 12532 7283 DKKKPSPPAP True NCI_RA007_Epitope_Rep5 1063.6025943339098 1063.6014899358602 34.69 2 -0.5874905085069627 0.173574346989714 0.9924082363407981 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 110702 9400 TGELDNTYIVY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 41.07 2 -0.5875807779206726 0.17361376065115097 0.9924523172966933 ['ENSG00000196562|ENST00000688720|SULF2', 'nc|ENSG00000196562|Q8IWU5-2|SULF2', 'SULF2|p.D609Gfs*38|1|0.05|ENSG00000196562|chr20:47665933-47665934|-/CC|frameshift_variant'] 2563 8583 AEQRRTER True H1975_Epitope_Rep1 1044.54245368884 1044.5413499358601 37.942 2 -0.5875812976217513 0.17361376065115097 0.9924525710365937 ['ENST00000483741.1_1_1:44684093-44685454:+|nuORF', 'ENSG00000178028|ENST00000372289|DMAP1'] 122506 11176 VGELVSIV True NCI_RA007_Epitope_Rep2 814.48001958974 814.47892993586 48.052 2 -0.5875960119039866 0.17361376065115097 0.9924597549578991 ['ENSG00000127412|ENST00000265310|TRPV5'] 35695 4073 GTEWYRKKMPF True NCI_RA007_Epitope_Rep2 1441.7176411694898 1441.71598490379 20.481 3 -0.5876838625276832 0.17364279469040617 0.9925026376286594 ['HS3ST5|p.I136T|1|0.28|ENSG00000249853|chr6:114057891-114057891|A/G|missense_variant'] 80395 4228 PGHVVPCPSP True H1975_Epitope_Rep2 988.4800366730799 988.47892993586 21.371 2 -0.58768691019313 0.1736504101227189 0.9925041250302773 ['ENSG00000135451|ENST00000257909|TROAP', 'ENST00000551192.5_1_12:49719304-49723306:+|nuORF', 'ENST00000546735.5_1_12:49717501-49723306:+|nuORF'] 68350 7437 LTELVEFYQQN True NCI_RA007_Epitope_Rep1 1382.6717960925398 1382.67016490379 32.927 3 -0.5877203407179182 0.1736504101227189 0.9925204395215812 ['nc|ENSG00000141968|P15498-2|VAV1', 'ENSG00000141968|ENST00000602142|VAV1'] 81839 13048 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 55.193 2 -0.587750055884353 0.1736504101227189 0.9925349391011691 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 33890 10841 GLPTPSDE True PC9_epitope_Rep5 814.3708630635799 814.36976993586 46.687 2 -0.5878067232149792 0.1736766809728183 0.9925625854069967 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 10667 11331 CPRPGGCL True PC9_epitope_Rep3 801.3625643926899 801.36146993586 48.59 2 -0.5878272028933921 0.1736766809728183 0.9925725753310434 ['ENST00000519604.5_1_20:61920746-61920884:+|nuORF'] 82345 26174 PPLCFFLLLL True PC9_epitope_Rep1 1174.68242487774 1174.68132993586 106.01 2 -0.5879056938988042 0.17369466740840817 0.9926108555842864 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000600281.1_1_19:12776145-12777515:-|nuORF', 'ENST00000466794.5_1_19:12769146-12777470:-|nuORF'] 93978 5737 RRKEQEQMQR True PC9_epitope_Rep5 1387.7102643732699 1387.70860490379 27.061 3 -0.5879196533546506 0.17369466740840817 0.9926176624086092 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 12212 9834 DIGVDISLTG True H1975_Epitope_Rep3 988.5076908895601 988.50658993586 42.855 2 -0.5879230074414147 0.17369466740840817 0.9926192978520804 ['CETP|p.V355Afs*7|1|0.25|ENSG00000087237|chr16:56978173-56978173|T/-|frameshift_variant', 'nc|ENSG00000087237|P11597-2|CETP', 'ENSG00000087237|ENST00000200676|CETP'] 118908 13019 VADLVAKL True PC9_epitope_Rep6 827.5116540711899 827.51054993586 61.658 2 -0.5879252858329171 0.17369466740840817 0.9926204087771741 ['ENST00000433214.2_1_10:88753296-88760106:+|nuORF'] 121950 6688 VFTDWIYR True NCI_RA007_Epitope_Rep4 1098.5498304850598 1098.5487299358601 32.35 2 -0.5879301346646341 0.17369466740840817 0.9926227729947157 ['ENSG00000184012|ENST00000332149|TMPRSS2', 'nc|ENSG00000184012|O15393-2|TMPRSS2'] 80896 18962 PHWRRPRRRRG True NCI_RA007_Epitope_Rep4 1528.8824470518798 1528.8808049037902 82.014 3 -0.587955624822377 0.1737078008773603 0.992635200869014 ['KCNC2|p.D173Rfs*80|1|0.2|ENSG00000166006|chr12:75207467-75207468|-/G|frameshift_variant'] 75278 14860 NIILNIGRMHR True NCI_RA007_Epitope_Rep1 1335.75575801371 1335.7546699358602 61.862 2 -0.5879609845417629 0.17372093392882687 0.992637813872094 ['ENSG00000137869|ENST00000396402|CYP19A1'] 58110 14280 LEKHRDRIP True PC9_epitope_Rep2 1162.65708951826 1162.65544490379 60.194 3 -0.5879977965439936 0.17372854418308964 0.9926557591864252 ['ENST00000515378.5_1_4:2256939-2263707:-|nuORF'] 108943 4884 TADTTTHVTP True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 23.871 2 -0.5880051485984421 0.17372854418308964 0.9926593428921434 ['nc|ENSG00000182871|P39060|COL18A1', 'nc|ENSG00000182871|P39060-1|COL18A1'] 60647 12826 LHLCGPSYLI True NCI_RA007_Epitope_Rep3 1114.58450174162 1114.5834099358601 57.692 2 -0.5880333341859484 0.17372854418308964 0.9926730807833464 ['ENST00000369393.7_1_6:90408675-90408747:-|nuORF'] 57847 19915 LEEWKFLDP True PC9_epitope_Rep1 1175.5862755634298 1175.5851699358602 81.421 2 -0.5880390402605218 0.17373063170441 0.9926758617844735 ['ZNF860|p.C40F|1|0.17|ENSG00000197385|chr3:31989198-31989198|G/T|missense_variant'] 26967 13558 FLDYYVAY True H1975_Epitope_Rep1 1052.4854988929999 1052.4844099358602 57.276 2 -0.5880475121830718 0.17373063170441 0.9926799906757197 ['nc|ENSG00000214694|A8MVX0|ARHGEF33', 'ENSG00000214694|ENST00000409978|ARHGEF33'] 106744 5548 STYCNQMMRRR True NCI_RA007_Epitope_Rep4 1444.6485927168399 1444.64695490379 27.938 3 -0.5880609460491018 0.17373063170441 0.9926865375429129 ['ENSG00000129538|ENST00000397967|RNASE1'] 58841 7855 LESSRVLDNP True H1975_Epitope_Rep1 1128.57750178488 1128.57640993586 35.166 2 -0.5880715196094662 0.17373063170441 0.9926916902206495 ['ENSG00000203737|ENST00000367685|GPR52'] 95336 16329 RVRVKGGG True H1975_Epitope_Rep1 827.5089687325898 827.50786993586 68.166 2 -0.5880830140914195 0.17373063170441 0.9926972914326314 ['ENSG00000105193|ENST00000251453|RPS16'] 42427 12153 IEDQHRNP True H1975_Epitope_Rep2 1007.4784564499499 1007.47734993586 51.831 2 -0.588168028489786 0.17377278433740684 0.9927387105843203 ['ENST00000462995.1_19:12462822-12476430:-|nuORF', 'nc|ENSG00000198342|Q9H7R0-2|ZNF442', 'ENSG00000198342|ENST00000242804|ZNF442'] 43219 8718 IFKAGHSVAL True PC9_epitope_Rep1 1041.59711503065 1041.5960099358601 38.371 2 -0.5881726914316323 0.17377278433740684 0.9927409819681714 ['nc|ENSG00000005844|P20701-3|ITGAL', 'ENSG00000005844|ENST00000356798|ITGAL', 'nc|ENSG00000005844|P20701-2|ITGAL'] 33033 8830 GIIKPPLQQQP True NCI_RA007_Epitope_Rep5 1217.71320741205 1217.71210993586 40.63 2 -0.5882049823104192 0.1737859140605136 0.9927567101338038 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 40278 8075 HQLFCQDVLK True NCI_RA007_Epitope_Rep1 1229.62267815549 1229.6210249037902 35.408 3 -0.5882873658808018 0.17379628158271096 0.9927968280323259 ['ENSG00000102595|ENST00000376747|UGGT2'] 112984 13231 TLLRTVYSVL True PC9_epitope_Rep2 1163.69140933831 1163.68975490379 56.171 3 -0.588320595660956 0.17379628158271096 0.9928130059694815 ['ENSG00000119514|ENST00000375011|GALNT12', 'ENSG00000139629|ENST00000356317|GALNT6'] 103479 5265 SPQGPAVP True NCI_RA007_Epitope_Rep3 751.3864535580699 751.38534993586 27.713 2 -0.5883911764459259 0.1738225386131062 0.9928473609891417 ['ENST00000589420.1_1_18:32821016-32837899:+|nuORF', 'nc|ENSG00000186812|Q8NF99-3|ZNF397', 'nc|ENSG00000186812|Q8NF99-2|ZNF397', 'ENSG00000186812|ENST00000330501|ZNF397'] 114303 13273 TPQEKIFIAA True PC9_epitope_Rep4 1116.6179100448799 1116.6168099358601 58.95 2 -0.5884057615483116 0.1738225386131062 0.9928544590138586 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7', 'ENST00000505692.1_1_4:122780107-122782831:-|nuORF', 'ENST00000502444.1_1_4:122782546-122791468:-|nuORF'] 26146 13173 FGYPKFISHQD True PC9_epitope_Rep4 1337.6404363946099 1337.6393299358601 58.568 2 -0.5884447768971334 0.17383290431245432 0.9928734442375869 ['nc|ENSG00000076604|Q9BUZ4-2|TRAF4', 'ENSG00000076604|ENST00000262395|TRAF4'] 45932 5946 ISEIESNRSFS True H1975_Epitope_Rep2 1267.60444480871 1267.60334993586 27.853 2 -0.5884545882544953 0.17383290431245432 0.9928782180538553 ['nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2', 'nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 46742 13159 ITELRVQKL True PC9_epitope_Rep6 1098.67609362734 1098.6749899358601 62.258 2 -0.5884969354262571 0.17387781043934217 0.9928988202873252 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4'] 41888 11467 ICNLPNNSL True PC9_epitope_Rep5 986.4855159763401 986.48440993586 49.105 2 -0.5885130132591765 0.17389093682471082 0.992906641335885 ['ENSG00000204021|ENST00000404190|LIPK', 'LIPK|p.N247Kfs*20|1|0.28|ENSG00000204021|chr10:88737703-88737704|-/A|frameshift_variant'] 62846 4198 LLMCEIPMVEL True PC9_epitope_Rep2 1289.6433391406897 1289.64169490379 21.473 3 -0.5885758865805768 0.17391995169772947 0.9929372210063473 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 31055 10755 GATGKEWHP True PC9_epitope_Rep1 981.4668291370899 981.4657299358599 46.257 2 -0.588630836966325 0.17393307699640917 0.992963940651475 ['ENST00000289081.7_1_9:97861636-97862104:-|nuORF'] 110781 17770 TGIHTPSLAL True PC9_epitope_Rep5 1008.5603951687599 1008.55928993586 73.37 2 -0.5887052669848171 0.1739455079831599 0.9930001224838697 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|299|2|anti-sense'] 79397 15953 PASSSTKLL True PC9_epitope_Rep1 902.50729696674 902.50618993586 66.173 2 -0.5887466532066508 0.1739455079831599 0.9930202362100288 ['ENSG00000102313|ENST00000218436|ITIH6', 'ITIH6|p.S731Qfs*9|1|0.37|ENSG00000102313|chrX:54757884-54757884|G/-|frameshift_variant'] 608 10859 AASACASTQVP True PC9_epitope_Rep2 1004.45969515132 1004.45858993586 47.087 2 -0.5887474734792937 0.1739455079831599 0.9930206348275148 ['ENST00000609111.1_1_10:88728383-88728773:-|nuORF'] 63243 14101 LLSLGRRTL True PC9_epitope_Rep2 1027.65021323267 1027.64910993586 59.514 2 -0.5887510505697676 0.1739455079831599 0.9930223731246444 ['ENST00000425075.6_1_5:137289987-137295325:-|nuORF'] 20314 7083 ENTPDLVSD True NCI_RA007_Epitope_Rep5 988.43491987212 988.43382993586 33.927 2 -0.5887554122967534 0.1739455079831599 0.9930244926825663 ['nc|ENSG00000137090|Q9Y5R6-2|DMRT1', 'ENST00000564322.1_1_9:841703-894198:+|nuORF', 'ENSG00000137090|ENST00000382276|DMRT1', 'DMRT1|p.S207Y|1|0.36|ENSG00000137090|chr9:893993-893993|C/A|missense_variant'] 74455 8376 NEVKNYER True NCI_RA007_Epitope_Rep2 1050.5094222250598 1050.50832993586 37.221 2 -0.588809591531263 0.1739455079831599 0.9930508175336937 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000493691.1_1_6:7410621-7411705:+|nuORF'] 97789 18447 SELAVLLNLL True PC9_epitope_Rep4 1083.65396120043 1083.65286993586 79.027 2 -0.5888174772000384 0.1739455079831599 0.9930546485544013 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 18573 7503 EKPSLEKV True PC9_epitope_Rep6 928.5229470308799 928.52184993586 38.109 2 -0.5889914890600704 0.17406154188311174 0.9931391543413104 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 117258 14383 TVLVDFVP True PC9_epitope_Rep2 888.4956696538799 888.49456993586 60.586 2 -0.5890058210443467 0.17406154188311174 0.993146111608089 ['ENST00000495879.1_1_3:61547945-61734588:+|nuORF'] 23602 10907 EWFLFRSLRYQ True NCI_RA007_Epitope_Rep2 1543.79358299107 1543.7924899358602 47.033 2 -0.5890078775351353 0.17406154188311174 0.9931471098683325 ['ENST00000465681.1_1_7:1064727-1065009:-|nuORF'] 12319 6766 DIPSRRDEGK True NCI_RA007_Epitope_Rep1 1171.5945488313498 1171.59344993586 30.328 2 -0.5890219271886153 0.17406154188311174 0.9931539296040495 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 107243 14867 SVKKKKKRGK True NCI_RA007_Epitope_Rep4 1185.8033598291297 1185.80170490379 64.649 3 -0.5890909715515008 0.17406913203710764 0.9931874378885479 ['ENSG00000055044|ENST00000264279|NOP58'] 135938 20972 WPWLRWWQELW True PC9_epitope_Rep2 1684.83030285296 1684.82920993586 86.119 2 -0.5891149314202492 0.17406913203710764 0.9931990636339639 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 36214 21376 GVCRERLRP True PC9_epitope_Rep3 1084.5923810867198 1084.59128993586 87.521 2 -0.5891378427055346 0.17406913203710764 0.9932101794535546 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 30943 7392 GARKRHGPGP True PC9_epitope_Rep1 1031.5736942474698 1031.5725899358602 33.247 2 -0.5892308309229799 0.174098136705161 0.9932552829020294 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 14108 6849 DSAEHDCSP True NCI_RA007_Epitope_Rep3 959.32907490459 959.32796993586 34.053 2 -0.5892781662333897 0.17410849019140656 0.9932782355498382 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1'] 20238 5666 ENLRPSEPAP True H1975_Epitope_Rep2 1108.5512870370399 1108.55018993586 26.791 2 -0.5892925852927232 0.17410849019140656 0.9932852263206348 ['ENSG00000148384|ENST00000371712|INPP5E', 'nc|ENSG00000148384|Q9NRR6-2|INPP5E', 'INPP5E|p.P191Rfs*105|1|0.13|ENSG00000148384|chr9:136438849-136438850|-/ACATCGCCTCCGACTCCCT|frameshift_variant'] 121391 16360 VEVQWETF True PC9_epitope_Rep2 1036.4865615221597 1036.48546993586 68.174 2 -0.589366767894076 0.1741506107343107 0.9933211850633786 ['TNR|p.P437T|1|0.32|ENSG00000116147|chr1:175393827-175393827|G/T|missense_variant'] 95644 13263 RYEKIEIMP True PC9_epitope_Rep3 1177.6165301458898 1177.61488490379 56.05 3 -0.5894476260390209 0.1741506107343107 0.9933603660451826 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'nc|ENSG00000104299|Q9NV88-2|INTS9', 'ENST00000520316.5_1_8:28627126-28633440:-|nuORF'] 52421 27211 KKRKRKKREKL True PC9_epitope_Rep5 1497.0103329035994 1497.00868490379 111.46 3 -0.5894927814767958 0.1741740787801779 0.9933822405405283 ['ENSG00000065183|ENST00000349139|WDR3'] 124588 16945 VGVTAAAA True H1975_Epitope_Rep1 658.3649898374999 658.36444496793 70.599 1 -0.5895010813394411 0.1741740787801779 0.9933862607272049 ['ENSG00000174279|ENST00000308618|EVX2'] 44446 14842 ILIFEWWYFRK True H1975_Epitope_Rep3 1599.8602059989096 1599.85910993586 62.472 2 -0.5895183076001785 0.1741740787801779 0.9933946040897446 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF', 'nc|ENSG00000004866|Q9NRC1-7|ST7'] 85610 10419 QGIVGDFD True H1975_Epitope_Rep3 849.38684748089 849.3862949679301 45.135 1 -0.5895529719863488 0.17420307809596416 0.9934113914434355 ['nc|ENSG00000196335|Q9BXU1-3|STK31', 'nc|ENSG00000196335|Q9BXU1-2|STK31', 'ENSG00000196335|ENST00000355870|STK31'] 62355 15996 LLGLKKLSFYY True NCI_RA007_Epitope_Rep5 1343.78530972315 1343.7842099358602 68.256 2 -0.5896137449437704 0.17423207649058162 0.9934408162913476 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 47109 10023 ITTRTYYTPTR True NCI_RA007_Epitope_Rep1 1371.71466396403 1371.71356993586 42.994 2 -0.5896645301217276 0.17424242424242425 0.9934653989782212 ['LYNX1|p.M47I|1|0.22|ENSG00000180155|chr8:142775606-142775606|C/G|missense_variant'] 67767 14793 LSYRKISV True PC9_epitope_Rep1 964.5705659296399 964.56946993586 61.721 2 -0.589694951958493 0.17424242424242425 0.9934801219755286 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant'] 65479 21252 LRKYRCLLVTF True NCI_RA007_Epitope_Rep4 1410.8169612879399 1410.81586993586 92.132 2 -0.5897175530332879 0.17425277133691197 0.9934910586789569 ['ENST00000336079.7_1_Y:15027660-15027840:+|nuORF'] 79580 5088 PDGWEEWYQNN True NCI_RA007_Epitope_Rep2 1436.5633082727197 1436.5622099358602 24.417 2 -0.589726367087699 0.17425277133691197 0.9934953235050539 ['ENSG00000198393|ENST00000328654|ZNF26'] 48953 14516 KEELIGELVRT True NCI_RA007_Epitope_Rep1 1285.7241660185696 1285.7230699358602 60.51 2 -0.5897436482652302 0.17426588530500103 0.9935036847802622 ['ENSG00000166813|ENST00000394412|KIF7'] 19216 7444 ELINAAKG True H1975_Epitope_Rep3 814.45486747106 814.45376993586 33.611 2 -0.5898420618122945 0.1743024566864112 0.9935512880133462 ['ENSG00000083845|ENST00000196551|RPS5'] 76873 7087 NRDLATPVM-[Oxidation] True PC9_epitope_Rep5 1031.50698007735 1031.50588993586 32.226 2 -0.5898462254588064 0.1743024566864112 0.9935533015089182 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 141556 12120 YTNIQETYF True PC9_epitope_Rep3 1177.52915461013 1177.52804993586 51.662 2 -0.5898686478054076 0.1743024566864112 0.9935641440387123 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 117695 17647 TVTTYQDAP True PC9_epitope_Rep1 994.4607406971398 994.4596499358599 72.672 2 -0.5898720900408281 0.1743024566864112 0.9935658084612137 ['EPHA6|p.D533Y|1|0.25|ENSG00000080224|chr3:97244278-97244278|G/T|missense_variant'] 70756 18473 LWWWSWRWWKL True NCI_RA007_Epitope_Rep1 1731.88267277899 1731.8815699358602 75.995 2 -0.5899303211570641 0.1743763200101631 0.9935939608092369 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 102754 15646 SNDGQFKLL True PC9_epitope_Rep3 1020.52400966004 1020.52290993586 65.329 2 -0.5899311068672614 0.1743763200101631 0.9935943406145139 ['nc|ENSG00000158711|P28324-2|ELK4', 'ENSG00000158711|ENST00000357992|ELK4'] 74388 17150 NESAVIVAP True PC9_epitope_Rep3 898.4759968384599 898.47544496793 71.123 1 -0.5899456742061706 0.17438389227642276 0.993601382078217 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 101573 10158 SLLLTNSASLW True H1975_Epitope_Rep1 1203.64993844915 1203.6488499358602 44.011 2 -0.5899764635009884 0.17438389227642276 0.9936162631928329 ['ENST00000409790.5_2_16:11273112-11273262:+|nuORF'] 132950 12699 VVPAALKVV True PC9_epitope_Rep6 894.59023874506 894.58914993586 60.323 2 -0.5900179186749706 0.17438389227642276 0.9936362958874343 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 110519 5271 TFKEGMDELR True NCI_RA007_Epitope_Rep5 1224.5808729131597 1224.57922490379 26.971 3 -0.5900551398759067 0.17441288089302442 0.9936542791680023 ['ENSG00000165813|ENST00000369287|CCDC186'] 111456 17723 THTTLAAYVM True PC9_epitope_Rep1 1106.5430308524599 1106.54192993586 72.969 2 -0.5900575011755397 0.17442599002826384 0.9936554199120771 ['CLCN3|p.D656Y|1|0.3|ENSG00000109572|chr4:169707083-169707083|G/T|missense_variant'] 119404 21867 VAQGIITGI True PC9_epitope_Rep5 870.51746772762 870.51636993586 89.149 2 -0.5900896701993712 0.17443078974945223 0.9936709594744948 ['ENSG00000148110|ENST00000375344|MFSD14B'] 122291 10759 VGAVQHVL True PC9_epitope_Rep1 821.47593726881 821.47484993586 46.271 2 -0.5901227909319935 0.17443078974945223 0.9936869562405392 ['ENST00000451055.6_1_3:122632522-122634295:-|nuORF'] 97591 7698 SEETYQVP True H1975_Epitope_Rep2 951.41854153199 951.41744993586 34.565 2 -0.590257540272088 0.17443078974945223 0.9937520113179062 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant', 'nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4', 'nc|ENSG00000087589|Q9NQ75-3|CASS4'] 115916 7637 TSFSPPPPP True H1975_Epitope_Rep2 925.4545331178898 925.45342993586 34.327 2 -0.5902703626118639 0.17443078974945223 0.9937581995219867 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 129151 7494 VQRLKEDRSSL True H1975_Epitope_Rep3 1329.73646203777 1329.73480490379 33.808 3 -0.590339077435991 0.17449632463841744 0.9937913553815444 ['ENST00000412023.5_1_12:6993487-6993658:+|nuORF'] 62774 13154 LLLRLRQIC True NCI_RA007_Epitope_Rep5 1126.7008689065399 1126.69976993586 57.275 2 -0.5903452616841399 0.17449632463841744 0.993794338813553 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 21832 4855 ESALAQQAK True H1975_Epitope_Rep3 944.49270953176 944.49160993586 23.801 2 -0.5903635095515707 0.17449632463841744 0.993803141494791 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 82732 10290 PRFTPWWERAK True NCI_RA007_Epitope_Rep1 1472.7677025963997 1472.76660993586 44.032 2 -0.5903664980777843 0.17449632463841744 0.9938045830689142 ['nc|ENSG00000164485|Q969J5-3|IL22RA2'] 67441 19003 LSSPYDVQKI True PC9_epitope_Rep5 1148.607739284 1148.60664993586 78.122 2 -0.5903705759693795 0.17449632463841744 0.9938065500851374 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-5|IL17RE', 'ENST00000489181.5_1_3:9944520-9950978:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-4|IL17RE', 'ENST00000383815.7_1_3:9944714-9956386:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-2|IL17RE'] 66070 9836 LSEIHSPNIQ True H1975_Epitope_Rep2 1136.58258716532 1136.5814899358602 42.82 2 -0.5904274448658239 0.1745253064075697 0.9938339772555551 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 116612 9126 TVAEPHAEPPP True H1975_Epitope_Rep2 1143.5560380643099 1143.5549499358601 40.055 2 -0.590477749323362 0.17455151611366884 0.993858231964622 ['MXRA8|p.R301Gfs*107|1|0.45|ENSG00000162576|chr1:1354730-1354730|G/-|frameshift_variant', 'ENST00000476718.1_1_1:1289695-1290347:-|nuORF', 'nc|ENSG00000162576|Q9BRK3-4|MXRA8', 'nc|ENSG00000162576|Q9BRK3-3|MXRA8', 'ENSG00000162576|ENST00000309212|MXRA8', 'nc|ENSG00000162576|Q9BRK3-2|MXRA8'] 28648 18311 FSLRSRCTF True NCI_RA007_Epitope_Rep4 1115.5545985956699 1115.5535099358601 79.215 2 -0.5904970587989536 0.17455151611366884 0.9938675405570753 ['ENST00000361189.6_1_5:108719181-108745589:-|nuORF'] 81624 19167 PLLGIYPNEYK True PC9_epitope_Rep2 1305.69688864157 1305.6952349037902 79.099 3 -0.5905353529210121 0.17456462034258863 0.9938859984655904 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|9|1|sense'] 99799 17015 SIKIKMRNNRK True NCI_RA007_Epitope_Rep1 1386.8241719267 1386.82306993586 70.313 2 -0.590658937946824 0.17463845189148 0.9939455424164996 ['ENST00000485726.1_1_7:103828364-103848439:-|nuORF'] 12314 17902 DIPLVKSYL True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 73.652 2 -0.5906700561964267 0.17463845189148 0.9939508974075797 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 2962 11051 AFFLELLS True NCI_RA007_Epitope_Rep2 938.5113197180199 938.51022993586 47.583 2 -0.5907272116041041 0.17468330317173064 0.9939784208929853 ['ENSG00000134398|ENST00000256797|ERN2', 'ERN2|p.L515Wfs*48|1|0.18|ENSG00000134398|chr16:23700665-23700665|G/-|frameshift_variant'] 56497 8175 LDFEKYRFYEM True H1975_Epitope_Rep1 1539.7068017022696 1539.70516490379 36.385 3 -0.5908406170018562 0.17476467880442548 0.9940330077710353 ['nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11', 'nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11', 'ENSG00000253873|ENST00000398587|PCDHGA11'] 57755 6716 LEEPKNIP True NCI_RA007_Epitope_Rep1 938.50729696674 938.50618993586 30.133 2 -0.5908746840396446 0.17476467880442548 0.9940493994011488 ['ENST00000366987.6_2_1:212793496-212793775:+|nuORF'] 75003 7949 NHQRGHTG True PC9_epitope_Rep3 905.4216102801701 905.42050993586 35.555 2 -0.5909438476745497 0.17476467880442548 0.9940826690361426 ['ZNF418|p.L413F|1|0.27|ENSG00000196724|chr19:57926944-57926944|G/A|missense_variant', 'ENSG00000196724|ENST00000396147|ZNF418'] 13015 10851 DLNDTFPEYK True NCI_RA007_Epitope_Rep2 1240.5611830144 1240.56008993586 46.812 2 -0.5909629290339596 0.17476467880442548 0.9940918455696495 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA', 'ENST00000414671.1_1_9:74825668-74829777:+|nuORF'] 83326 9553 PTEDELSLP True H1975_Epitope_Rep2 999.4760564081099 999.47547496793 41.72 1 -0.5910018617134409 0.17476467880442548 0.994110566052433 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 81909 15077 PLSFLCRR True H1975_Epitope_Rep3 990.5433056359799 990.54220993586 63.389 2 -0.5910489269009332 0.17478532768280874 0.9941331918290597 ['ENST00000491547.1_1_1:14925308-14925407:+|nuORF'] 63192 17742 LLRTQVRIPGE True PC9_epitope_Rep1 1280.75646920636 1280.75536993586 73.042 2 -0.5910515077992197 0.17478532768280874 0.9941344323875575 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 42343 12073 IEANDDPNG True H1975_Epitope_Rep2 943.38830403287 943.38720993586 51.521 2 -0.5910551921149333 0.17478532768280874 0.9941362032953472 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ENST00000504142.2_2_5:89924394-89949789:+|nuORF'] 90894 12225 REWSRLSREVI True NCI_RA007_Epitope_Rep2 1429.7789955560897 1429.77788993586 52.151 2 -0.5910646262747866 0.17478532768280874 0.9941407377718436 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-5|CAPRIN2'] 54356 8075 KYEELQIT True NCI_RA007_Epitope_Rep5 1022.5284263341399 1022.5273299358599 37.749 2 -0.5911173019850922 0.1747956511387985 0.9941660518594762 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 108845 8233 SYYENDKSTTP True H1975_Epitope_Rep2 1303.5568259099498 1303.5557299358602 36.619 2 -0.5911282129835095 0.1747956511387985 0.9941712944077513 ['ARAP2|p.P1501Qfs*6|1|1.0|ENSG00000047365|chr4:36083374-36083374|G/-|frameshift_variant', 'ENSG00000047365|ENST00000303965|ARAP2'] 130490 21210 VSPRGRGP True PC9_epitope_Rep4 824.461684187 824.46058993586 89.748 2 -0.5911887022819082 0.174824619877472 0.9942003529049755 ['ENST00000375412.9_2_9:96214723-96215017:-|nuORF'] 88649 17795 QTELVMFILFR True NCI_RA007_Epitope_Rep1 1395.75844335231 1395.75734993586 73.357 2 -0.5912085413130135 0.17483771644420462 0.9942098813278687 ['XPO5|p.L158F|1|0.22|ENSG00000124571|chr6:43570649-43570649|C/A|missense_variant'] 135335 23190 WGKKMKGKI True PC9_epitope_Rep4 1074.6372060208198 1074.63610993586 97.429 2 -0.591228080222574 0.17484803758193274 0.9942192646071994 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 85417 5804 QEWKDKAQNLY True H1975_Epitope_Rep3 1421.6939285194496 1421.6922749037901 27.348 3 -0.591259106369043 0.17484803758193274 0.9942341624246581 ['ENSG00000084674|ENST00000233242|APOB'] 74427 12159 NETLDEDLFHK True H1975_Epitope_Rep1 1359.63065955655 1359.6295699358602 51.787 2 -0.5913574285629049 0.17485280815069906 0.9942813571459643 ['nc|ENSG00000101311|Q9BQL6-3|FERMT1', 'ENSG00000101311|ENST00000217289|FERMT1'] 62944 12199 LLPELGVVK True NCI_RA007_Epitope_Rep1 966.6113681124599 966.61026993586 51.419 2 -0.5913628730088832 0.17485280815069906 0.9942839697424285 ['ENST00000597423.1_1_19:59058531-59059226:+|nuORF'] 128174 6735 VPLRWTQLMP True NCI_RA007_Epitope_Rep4 1239.67979910879 1239.67816490379 32.528 3 -0.5913693404560012 0.17485280815069906 0.9942870731394187 ['ENST00000560002.5_1_15:56945693-56945987:-|nuORF'] 130596 13498 VSSHVHTVTL True PC9_epitope_Rep5 1078.57710786206 1078.5760099358602 56.939 2 -0.5913729908758767 0.17485280815069906 0.9942888247405092 ['nc|ENSG00000172236|Q15661-2|TPSAB1', 'ENSG00000197253|ENST00000606293|TPSB2', 'ENSG00000172236|ENST00000338844|TPSAB1'] 23478 14325 EVTVTGPL True PC9_epitope_Rep1 814.4436340810199 814.44252993586 59.924 2 -0.5913782134311084 0.17486312782670793 0.9942913306469098 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 58608 9271 LEQTDIQGA True H1975_Epitope_Rep1 973.4716397340097 973.47054993586 40.573 2 -0.5913951079492906 0.17486312782670793 0.9942994365464026 ['ENSG00000198730|ENST00000361367|CTR9'] 106656 6005 STTKYLWLQIR True NCI_RA007_Epitope_Rep4 1407.78743498147 1407.78577490379 29.717 3 -0.5914028555648707 0.17486789698344943 0.9943031535589429 ['ENST00000423427.1_2_3:173114104-173322101:+|nuORF'] 60140 15625 LGNALIVVTI True PC9_epitope_Rep2 1011.63283183303 1011.63172993586 65.378 2 -0.5914275439008213 0.17486789698344943 0.994314997029066 ['ENSG00000166884|ENST00000300127|OR4D6', 'OR4D6|p.A110Qfs*8|1|0.14|ENSG00000166884|chr11:59457285-59457285|G/-|frameshift_variant'] 105243 8855 SRKHVERMKYR True H1975_Epitope_Rep1 1488.8095844917198 1488.80848993586 38.984 2 -0.591438490959301 0.17486789698344943 0.9943202480275134 ['ENST00000555559.5_1_14:65946487-66028150:+|nuORF'] 70236 7940 LVQTLPIE True NCI_RA007_Epitope_Rep3 911.5327834385898 911.53168993586 38.34 2 -0.5914495121329298 0.17486789698344943 0.9943255342560615 ['COL22A1|p.G705Efs*110|1|0.39|ENSG00000169436|chr8:138737549-138737549|C/-|frameshift_variant', 'COL22A1|p.P1042Qfs*65|1|0.27|ENSG00000169436|chr8:138676583-138676583|G/-|frameshift_variant', 'nc|ENSG00000169436|Q8NFW1-2|COL22A1', 'ENSG00000169436|ENST00000303045|COL22A1'] 95045 7515 RTSPSSLVA True PC9_epitope_Rep4 916.4977949121999 916.49668993586 36.274 2 -0.591463236398689 0.17487544032242708 0.9943321165532251 ['nc|ENSG00000111087|P08151-2|GLI1', 'ENSG00000111087|ENST00000228682|GLI1'] 25825 7071 FFERRYQERMK True NCI_RA007_Epitope_Rep2 1588.7932657212398 1588.79216993586 32.129 2 -0.5914646982323455 0.17487544032242708 0.9943328176340114 ['nc|ENSG00000188732|A4D161-3|FAM221A', 'nc|ENSG00000188732|A4D161-2|FAM221A', 'ENSG00000188732|ENST00000344962|FAM221A'] 136460 17050 WVFTIFLQFCL True PC9_epitope_Rep5 1415.73116597531 1415.73006993586 70.602 2 -0.5914737863258932 0.17487544032242708 0.9943371760653066 ['ABCA13|p.P4616L|1|0.11|ENSG00000179869|chr7:48520090-48520090|C/T|missense_variant'] 16234 12270 EEERMKQKAEK True NCI_RA007_Epitope_Rep1 1404.7031133041598 1404.7020099358601 51.697 2 -0.5915384011722471 0.17488853275788205 0.9943681574520642 ['ENST00000489152.5_1_2:74717680-74718064:+|nuORF', 'ENST00000449459.5_1_2:74710449-74718064:+|nuORF', 'TTC31|p.P213Hfs*46|1|0.46|ENSG00000115282|chr2:74491324-74491324|C/-|frameshift_variant', 'nc|ENSG00000115282|Q49AM3-2|TTC31', 'ENST00000464241.5_1_2:74710222-74719357:+|nuORF', 'ENSG00000115282|ENST00000233623|TTC31'] 86859 8698 QLQQRLQLQ True NCI_RA007_Epitope_Rep1 1153.6567551650899 1153.65564993586 37.834 2 -0.5917091074171695 0.17498572063210002 0.9944499534470342 ['nc|ENSG00000103460|O15405-2|TOX3', 'ENSG00000103460|ENST00000219746|TOX3'] 139820 10036 YPLPQEHSQIY True H1975_Epitope_Rep1 1373.66156576201 1373.6604699358602 43.542 2 -0.591721424614876 0.17498572063210002 0.9944558523392253 ['nc|ENSG00000089225|Q99593-2|TBX5', 'nc|ENSG00000089225|Q99593-3|TBX5', 'ENSG00000089225|ENST00000405440|TBX5'] 102531 14590 SLVRAILGT True PC9_epitope_Rep2 928.5705659296399 928.56946993586 61.39 2 -0.5917217124975823 0.17498572063210002 0.9944559902056792 ['nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 66052 6381 LSEGWGGG True NCI_RA007_Epitope_Rep4 761.3344179852099 761.33332993586 31.148 2 -0.5917267111228669 0.17498572063210002 0.994458384001467 ['ENST00000267328.4_1_13:111175537-111175825:-|nuORF'] 117018 8333 TVHRRSHLEEK True H1975_Epitope_Rep1 1390.74294440054 1390.74184993586 36.984 2 -0.5917489247948997 0.17498572063210002 0.9944690211035204 ['ENSG00000146587|ENST00000396912|RBAK'] 120637 9255 VEIGVVAVK True H1975_Epitope_Rep3 912.5644179200399 912.56332993586 40.592 2 -0.5918131982540015 0.17499881007155435 0.994499791120158 ['ENSG00000070193|ENST00000264664|FGF10'] 138249 10118 YGVRMTAM True PC9_epitope_Rep3 927.43064395251 927.42954993586 43.869 2 -0.5919057722974281 0.17502221094047468 0.994544089755622 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'ERC1-VWF|2|fusion', 'ERC1-VWF|1|fusion'] 11441 6292 DEYEAHQERVL True NCI_RA007_Epitope_Rep2 1387.6368075661499 1387.6351649037902 29.08 3 -0.5919088860650554 0.17502221094047468 0.9945455793492546 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF', 'ENSG00000121481|ENST00000367510|RNF2'] 65040 18751 LQKKQVQI True PC9_epitope_Rep5 983.6127650947899 983.61166993586 77.137 2 -0.5919184295359667 0.17502221094047468 0.9945501446785133 ['ENSG00000164440|ENST00000358430|TXLNB'] 31081 15936 GATYTGYGSSF True PC9_epitope_Rep2 1109.46655435357 1109.46544993586 66.545 2 -0.5919304562733647 0.17503252213091347 0.9945558975746819 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 62168 14690 LLELVQTPRLP True H1975_Epitope_Rep1 1277.77072228817 1277.7696299358602 61.722 2 -0.5919580745065862 0.17503252213091347 0.994569107027338 ['ENST00000366663.9_1_1:230974343-230974889:-|nuORF'] 83280 9314 PTAVNGVKVL True NCI_RA007_Epitope_Rep4 996.5967806774798 996.59568993586 42.683 2 -0.5920375535332953 0.17505591953931818 0.9946071090335744 ['nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 12242 12753 DIKEVRIMRWF True H1975_Epitope_Rep3 1491.80203949979 1491.8009499358602 54.268 2 -0.5920423435257639 0.17505591953931818 0.9946093987530275 ['ENST00000357219.3_1_6:37186200-37186806:-|nuORF', 'ENSG00000172738|ENST00000651039|TMEM217', 'nc|ENSG00000172738|Q8N7C4|TMEM217'] 14371 9318 DTAHCMQH True H1975_Epitope_Rep2 941.3483708805302 941.34726993586 40.802 2 -0.5921089574443721 0.17505591953931818 0.9946412349916058 ['ENST00000309415.7_1_2:110261380-110261551:+|nuORF'] 121402 18460 VEVSLGLPAL True PC9_epitope_Rep5 996.5855472874398 996.58444993586 76.028 2 -0.5921523621170962 0.1750737603502427 0.9946619723323061 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 2357 3898 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 20.114 2 -0.5921547387089329 0.1750737603502427 0.9946631076375583 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 102713 6595 SMDTEKSRFFR True H1975_Epitope_Rep3 1402.66633387262 1402.66522993586 30.321 2 -0.5921876322782886 0.1750737603502427 0.9946788193619654 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 129762 22875 VRRAIKDIV True H1975_Epitope_Rep2 1068.67676233368 1068.67566993586 94.435 2 -0.5921965689389987 0.1750737603502427 0.9946830874606019 ['ENSG00000116198|ENST00000378230|CEP104', 'nc|ENSG00000116198|O60308-3|CEP104', 'ENST00000494653.5_1_1:3750422-3768971:-|nuORF'] 120554 6137 VEGGPNPP True NCI_RA007_Epitope_Rep1 765.36571811349 765.36462993586 27.908 2 -0.5922132273389912 0.1750737603502427 0.9946910428156406 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ADGRV1|p.G286Efs*8|1|0.44|ENSG00000164199|chr5:90627394-90627394|G/-|frameshift_variant'] 51 15879 AAAFHPGLAAA True PC9_epitope_Rep3 995.5188647099498 995.51776993586 66.227 2 -0.5922910056343937 0.17511579214516845 0.9947281760653447 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'nc|ENSG00000125166|P00505-2|GOT2'] 129993 25470 VRVVVLVT True PC9_epitope_Rep5 883.5854877177899 883.58493496793 103.21 1 -0.5923032629756592 0.17511579214516845 0.9947340264493836 ['ENST00000396821.7_1_22:38882394-38883916:-|nuORF'] 105915 5655 SSSAFLKAETE True H1975_Epitope_Rep3 1168.5611830144 1168.56008993586 26.782 2 -0.5923866142087045 0.17515782127335597 0.9947737983057904 ['AKAP13|p.A986S|1|0.13|ENSG00000170776|chr15:85581024-85581024|G/T|missense_variant'] 19900 8717 ELTRLKYLHEK True NCI_RA007_Epitope_Rep1 1428.8088987020399 1428.80725490379 37.91 3 -0.5923962138551672 0.17515782127335597 0.9947783775930211 ['nc|ENSG00000284701|A6NEH6|TMEM247'] 9406 12364 AVTEDKYEI True PC9_epitope_Rep4 1066.51825557326 1066.51767496793 55.364 1 -0.5924745855249465 0.1751812082665863 0.9948157530480366 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 129992 25593 VRVVVLVT True PC9_epitope_Rep3 883.5854877177899 883.58493496793 103.94 1 -0.5924857886894153 0.1751812082665863 0.9948210943901797 ['ENST00000396821.7_1_22:38882394-38883916:-|nuORF'] 70671 23985 LWHIWRERN True PC9_epitope_Rep6 1308.68397297244 1308.68233490379 105.68 3 -0.5925118008711234 0.1751812082665863 0.9948334948389633 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 43120 9988 IEYLYRRG True PC9_epitope_Rep5 1068.5716285587998 1068.5705299358601 43.394 2 -0.5925217636439253 0.1751915116334396 0.994838243742612 ['ENSG00000205138|ENST00000378887|SDHAF1'] 102844 7523 SNVDKVQESRN True NCI_RA007_Epitope_Rep1 1274.6214918551798 1274.6203899358602 33.255 2 -0.5925354044224117 0.1751915116334396 0.9948447453551461 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 16153 9225 EEDFFLGPSGP True NCI_RA007_Epitope_Rep5 1193.5240692296898 1193.5229699358601 42.134 2 -0.5925502293657211 0.17522045295946204 0.9948518107639527 ['nc|ENSG00000117533|O75379-2|VAMP4'] 119532 8084 VASKNPQVP True PC9_epitope_Rep1 938.5185303567799 938.51742993586 35.919 2 -0.5926346544203164 0.1752307545913027 0.9948920346318093 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 106906 15543 SVDPKATSV True PC9_epitope_Rep2 902.4709114580199 902.46980993586 65.058 2 -0.5926536226274786 0.1752307545913027 0.9949010690671463 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'SDK2|p.P1051Lfs*33|1|0.18|ENSG00000069188|chr17:73398361-73398371|GCGGGCATCGG/-|frameshift_variant', 'SDK2|p.S1083Vfs*66|1|0.28|ENSG00000069188|chr17:73398143-73398143|G/-|frameshift_variant', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 927 4711 ADNAFDDEYLK True NCI_RA007_Epitope_Rep4 1299.5619112903898 1299.56026490379 24.55 3 -0.5926642385143042 0.1752438347474427 0.9949061248855694 ['nc|ENSG00000156219|Q13508-2|ART3', 'ENST00000513494.5_1_4:76997042-77020397:+|nuORF', 'nc|ENSG00000156219|Q13508-3|ART3', 'ENSG00000156219|ENST00000355810|ART3'] 129991 25707 VRVVVLVT True PC9_epitope_Rep1 883.5854877177899 883.58493496793 103.92 1 -0.5927113664074612 0.17527277340776454 0.9949285655580653 ['ENST00000396821.7_1_22:38882394-38883916:-|nuORF'] 46536 9398 ISYWRNEFDWK True NCI_RA007_Epitope_Rep1 1542.7255630008997 1542.72391490379 40.548 3 -0.5928690539648993 0.17530171115022916 0.9950036032136502 ['ENSG00000143819|ENST00000272167|EPHX1', 'ENST00000467015.1_1_1:226016586-226019776:+|nuORF'] 126580 16101 VLLTHLLV True PC9_epitope_Rep2 906.59023874506 906.58914993586 67.19 2 -0.5929248812915983 0.17532508721852205 0.9950301516394736 ['nc|ENSG00000138613|Q8WW43-2|APH1B', 'ENSG00000138613|ENST00000261879|APH1B'] 73613 19756 MWGWWRWWEHR True NCI_RA007_Epitope_Rep1 1714.77280506018 1714.7717099358601 81.033 2 -0.592930197247933 0.17532508721852205 0.9950326791316818 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 101474 21181 SLLATAILGA True PC9_epitope_Rep5 928.5593325395998 928.55822993586 86.521 2 -0.5929408781421269 0.17532508721852205 0.9950377571485388 ['ENSG00000146802|ENST00000312814|TMEM168'] 129763 22964 VRRAIKDIV True H1975_Epitope_Rep2 1068.67676233368 1068.67566993586 94.781 2 -0.5930085937827004 0.17533816463424304 0.9950699432196121 ['ENSG00000116198|ENST00000378230|CEP104', 'nc|ENSG00000116198|O60308-3|CEP104', 'ENST00000494653.5_1_1:3750422-3768971:-|nuORF'] 14993 7802 DYISHFLTFS True NCI_RA007_Epitope_Rep1 1228.5764391557202 1228.57534993586 34.338 2 -0.5930636410737777 0.1753932513002664 0.9950960976868484 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 102443 8589 SLTSPTHV True PC9_epitope_Rep4 840.4341320264801 840.43302993586 40.518 2 -0.5930895077001076 0.1753932513002664 0.9951083844597908 ['nc|ENSG00000167757|Q9UBX7-4|KLK11', 'nc|ENSG00000167757|Q9UBX7-3|KLK11'] 6078 18536 APLLWSHLVP True PC9_epitope_Rep2 1131.6440652230701 1131.64296993586 76.649 2 -0.5931020447557509 0.1753932513002664 0.9951143388920306 ['ENST00000598497.1_1_19:58601666-58601705:-|nuORF'] 142088 10359 YVMELPKLK True NCI_RA007_Epitope_Rep3 1119.63620296131 1119.63510993586 47.81 2 -0.5931615042053808 0.17544555083402041 0.9951425724501101 ['nc|ENSG00000080823|Q9UQ07-5|MOK', 'nc|ENSG00000080823|Q9UQ07-6|MOK', 'ENSG00000080823|ENST00000361847|MOK', 'ENST00000521249.1_1_14:102695628-102696024:-|nuORF', 'ENST00000521766.5_1_14:102695648-102699035:-|nuORF'] 130729 5740 VSVRSQID True PC9_epitope_Rep4 902.48214484806 902.48104993586 28.907 2 -0.5932584720419672 0.17544555083402041 0.9951885932308279 ['ENSG00000116688|ENST00000235329|MFN2', 'nc|ENSG00000116688|O95140-2|MFN2'] 9931 11274 AYLVHVPEN True PC9_epitope_Rep5 1040.52909504048 1040.5279899358602 48.358 2 -0.5932857276041487 0.17544555083402041 0.9952015234847619 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 2946 8862 AFDFESRSEI True PC9_epitope_Rep4 1199.5458673034298 1199.54422490379 41.619 3 -0.5932886484129318 0.17544555083402041 0.9952029090039093 ['nc|ENSG00000151948|Q96MS3-2|GLT1D1', 'ENSG00000151948|ENST00000442111|GLT1D1', 'nc|ENSG00000151948|Q96MS3-3|GLT1D1', 'GLT1D1|p.N276Mfs*5|1|0.22|ENSG00000151948|chr12:128957583-128957583|C/-|frameshift_variant'] 95574 11346 RWSRRTLYVQ True NCI_RA007_Epitope_Rep5 1363.74730150499 1363.7462099358602 50.293 2 -0.5933121041981312 0.17545584271444425 0.9952140345715058 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 76021 9339 NLYRCMPVP True PC9_epitope_Rep1 1091.52560696651 1091.5245099358601 40.78 2 -0.5933429999260129 0.17545584271444425 0.995228686468171 ['ENST00000450473.1_1_20:52556707-52556815:+|nuORF'] 13341 9781 DLVLNVWDF True NCI_RA007_Epitope_Rep4 1119.5600608155898 1119.5589699358602 44.472 2 -0.5933679159616799 0.17546335198896518 0.9952405004239372 ['ENSG00000188906|ENST00000298910|LRRK2', 'ENST00000479187.5_1_12:40692272-40758932:+|nuORF'] 67105 13834 LSQKLEDL True PC9_epitope_Rep2 944.5178616504398 944.51676993586 58.496 2 -0.5933798099245385 0.17546335198896518 0.9952461392767948 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4'] 108997 7202 TAGSFSLSVR True NCI_RA007_Epitope_Rep5 1023.53490869691 1023.53380993586 34.38 2 -0.5934323036288535 0.17546335198896518 0.9952710209657203 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 130898 13391 VTDDLVC[Carbamidomethyl]LVYK True H1975_Epitope_Rep1 1323.6744392242601 1323.6733499358602 56.619 2 -0.5934534981916231 0.17547086054917876 0.9952810646274515 ['ENSG00000143742|ENST00000304786|SRP9'] 91762 12040 RKFLLASV True PC9_epitope_Rep1 932.5807366905199 932.57962993586 51.171 2 -0.5934928164539922 0.17547086054917876 0.9952996930220018 ['ENSG00000165490|ENST00000533655|DDIAS', 'nc|ENSG00000165490|Q8IXT1-2|DDIAS'] 34260 18470 GNRVRRAQP True H1975_Epitope_Rep2 1052.5951579680398 1052.59406993586 76.646 2 -0.5935874230605358 0.17547086054917876 0.9953444963556248 ['ENSG00000196196|ENST00000354323|HRCT1'] 75280 14504 NIINSSAC True NCI_RA007_Epitope_Rep1 820.3749028982 820.37435496793 60.463 1 -0.5936160502002609 0.17548393233666787 0.9953580479107061 ['ENST00000449959.6_1_12:10131945-10147620:+|nuORF'] 129529 16808 VRKSLGRG True NCI_RA007_Epitope_Rep1 871.5351834804299 871.53408993586 69.508 2 -0.5936380252340349 0.17552871048543073 0.9953684487283987 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 56733 5660 LDLGGTNFRVM True NCI_RA007_Epitope_Rep2 1221.61759277505 1221.61594490379 26.631 3 -0.5936660709480808 0.17555206797609424 0.9953817205910926 ['nc|ENSG00000106633|P35557-3|GCK', 'ENSG00000106633|ENST00000403799|GCK', 'nc|ENSG00000106633|P35557-2|GCK'] 129169 7936 VQSATVLDLK True H1975_Epitope_Rep1 1072.6128246644398 1072.61172993586 35.475 2 -0.5936775151666057 0.17555206797609424 0.9953871355372886 ['ENST00000481947.1_1_16:105509-105883:+|nuORF', 'ENSG00000161981|ENST00000293861|SNRNP25', 'nc|ENSG00000161981|Q9BV90|SNRNP25'] 85308 8138 QERFTQDTQP True H1975_Epitope_Rep3 1248.5734790335998 1248.5723899358602 36.28 2 -0.5936982147290133 0.17555206797609424 0.9953969286869705 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 101726 9709 SLNHEASELA True H1975_Epitope_Rep2 1069.50400249145 1069.50290993586 42.329 2 -0.5937786484012088 0.1756090602165195 0.9954349696512647 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000525623.1_1_11:130106686-130108390:-|nuORF'] 139838 6827 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.3921149679301 31.666 1 -0.5938029307133255 0.1756090602165195 0.995446449873638 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 62962 11136 LLPHQDSVP True PC9_epitope_Rep2 1004.52909504048 1004.52798993586 48.16 2 -0.5938243776701759 0.1756090602165195 0.995456588024472 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1'] 11004 6577 DANVFITLFGE True NCI_RA007_Epitope_Rep2 1224.60265390356 1224.60154993586 30.195 2 -0.5938329175541565 0.1756090602165195 0.9954606244869114 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1'] 26818 8879 FLAPGRVP True NCI_RA007_Epitope_Rep1 855.49667271339 855.49556993586 38.54 2 -0.5938365603549192 0.1756090602165195 0.9954623462223605 ['ENST00000601592.5_1_19:17326774-17328282:+|nuORF', 'nc|ENSG00000053501|Q9NZ43-3|USE1', 'nc|ENSG00000053501|Q9NZ43-2|USE1', 'ENSG00000053501|ENST00000263897|USE1'] 65579 19236 LRSRRALGF True NCI_RA007_Epitope_Rep1 1074.6410455312998 1074.6399499358602 78.979 2 -0.59386166270695 0.1756090602165195 0.9954742094548489 ['ENST00000489343.5_1_3:132440828-132441221:+|nuORF'] 70090 24090 LVPAMLWGL True PC9_epitope_Rep2 998.5623097450599 998.56120993586 98.164 2 -0.5938760275117216 0.1756090602165195 0.9954809972715039 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 396 6719 AALEAAAAA True PC9_epitope_Rep1 757.3970182417698 757.39592993586 30.648 2 -0.5938953053244789 0.1756090602165195 0.9954901055940641 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598'] 129856 22276 VRRRRGRH True PC9_epitope_Rep4 1091.6649092937098 1091.6638099358602 93.923 2 -0.5940443752623645 0.17568552860992234 0.9955604971687814 ['ENST00000370282.7_1_1:93645835-93645964:-|nuORF'] 83263 8690 PTAEGLAAA True PC9_epitope_Rep4 799.4075829254699 799.40648993586 40.917 2 -0.5941206453035796 0.1756930245827588 0.9955964843407182 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 64313 18501 LPLAAAPSF True H1975_Epitope_Rep2 885.49600400705 885.4954549679301 76.766 1 -0.5941555421637637 0.1756930245827588 0.995612943694226 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF'] 11419 7649 DEVFHDIAYK True H1975_Epitope_Rep1 1235.5822528121496 1235.5811499358601 34.4 2 -0.5941796082370369 0.1756930245827588 0.9956242923022952 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 74281 8336 NEKERTRFENL True H1975_Epitope_Rep1 1434.7215402496197 1434.7204499358602 36.995 2 -0.5942638800743291 0.17570608932703585 0.9956640165418277 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6'] 18768 10946 ELDACSFKP True PC9_epitope_Rep3 1008.45863252216 1008.45752993586 47.085 2 -0.594363836876383 0.175748066438443 0.9957111039394377 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS', 'EYS|p.P378Lfs*2|1|0.18|ENSG00000188107|chr6:65402529-65402529|G/-|frameshift_variant', 'nc|ENSG00000188107|Q5T1H1-2|EYS', 'nc|ENSG00000188107|Q5T1H1-4|EYS'] 129530 16897 VRKSLGRG True NCI_RA007_Epitope_Rep1 871.5351834804299 871.53408993586 69.853 2 -0.594364042988949 0.175748066438443 0.9957112010001345 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 46386 7511 ISRYIMMKHVP True PC9_epitope_Rep3 1373.73118305865 1373.72953490379 33.894 3 -0.5944434635188481 0.17576112968920868 0.9957485904620352 ['ENST00000397457.6_2_6:8014843-8014969:-|nuORF'] 40093 9064 HPVLMSEA True PC9_epitope_Rep3 882.4269384710601 882.42584993586 39.807 2 -0.5945074923807722 0.17579753094245734 0.9957787184899753 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 71953 5387 MESLLNRSKPS True H1975_Epitope_Rep3 1260.64962117932 1260.64798490379 25.786 3 -0.594520500530365 0.17579753094245734 0.9957848376386912 ['ENST00000579953.5_1_17:65124885-65124921:-|nuORF'] 82756 7854 PRLEPREAVPV True H1975_Epitope_Rep3 1261.71427004121 1261.7131699358602 35.186 2 -0.5945350908253094 0.17579753094245734 0.9957917003647576 ['ENST00000502875.1_1_4:141563950-141565549:-|nuORF'] 100772 21100 SLEDTIYVM True PC9_epitope_Rep5 1069.5001629809701 1069.49906993586 86.226 2 -0.5946210174471983 0.17579753094245734 0.9958321024108835 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 66615 16005 LSKARRRSRPR True PC9_epitope_Rep2 1381.8490812349298 1381.8474449037901 66.819 3 -0.5946260096208105 0.1758105923742512 0.9958344489222186 ['ENST00000395094.3_1_16:30543822-30545758:-|nuORF', 'ENST00000252799.3_1_16:30543822-30545758:-|nuORF', 'nc|ENSG00000169955|Q9BV97|ZNF747', 'ENSG00000169955|ENST00000693075|ZNF747'] 130175 5995 VSEETVGPSHE True H1975_Epitope_Rep3 1169.52004647841 1169.51894993586 28.072 2 -0.5946926880059551 0.1758497741858807 0.995865782129069 ['ENSG00000150667|ENST00000350221|FSIP1'] 39761 5443 HLVQTHYYNYR True NCI_RA007_Epitope_Rep2 1492.7211463268 1492.71949490379 25.792 3 -0.5946938621805361 0.1758497741858807 0.9958663337553253 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40', 'ENST00000483546.1_1_6:5002311-5004281:-|nuORF'] 129531 17419 VRKSLGRG True NCI_RA007_Epitope_Rep2 871.5351834804299 871.53408993586 72.496 2 -0.5947118977409765 0.1758497741858807 0.9958748062508382 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 79887 17699 PELTEDQKKEV True PC9_epitope_Rep6 1314.6667107120998 1314.66505490379 80.714 3 -0.5947312998393013 0.175857260569183 0.995883919448062 ['CETN1|p.Q31K|1|0.57|ENSG00000177143|chr18:580499-580499|C/A|missense_variant'] 5376 21513 ALSGRDMIGI True PC9_epitope_Rep4 1031.54336520563 1031.54226993586 90.929 2 -0.5947906234100773 0.175857260569183 0.9959117757479 ['ENSG00000198231|ENST00000389924|DDX42', 'nc|ENSG00000198231|Q86XP3-2|DDX42'] 110274 4347 TERWWQSPP True H1975_Epitope_Rep2 1185.5567067706497 1185.5550749037902 21.836 3 -0.5947926999447574 0.175857260569183 0.9959127505956156 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5', 'LAMA5|p.D641Gfs*42|1|0.13|ENSG00000130702|chr20:62337908-62337909|-/C|frameshift_variant'] 9375 7209 AVSHSEFWHR True PC9_epitope_Rep5 1254.5894038812598 1254.58774490379 32.694 3 -0.5948162785642074 0.17587780453796426 0.9959238187354298 ['nc|ENSG00000160058|Q9NW68-7|BSDC1', 'nc|ENSG00000160058|Q9NW68-3|BSDC1', 'nc|ENSG00000160058|Q9NW68-9|BSDC1', 'nc|ENSG00000160058|Q9NW68-4|BSDC1', 'nc|ENSG00000160058|Q9NW68-8|BSDC1', 'nc|ENSG00000160058|Q9NW68-2|BSDC1', 'ENSG00000160058|ENST00000455895|BSDC1'] 76630 17714 NQQLPIESQMV True PC9_epitope_Rep6 1285.63363676201 1285.63252993586 80.77 2 -0.5948299985260704 0.17587780453796426 0.9959302581885273 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 12002 4425 DHRRRRGERDE True PC9_epitope_Rep2 1480.73556760432 1480.73392490379 22.377 3 -0.5948305998483068 0.17587780453796426 0.995930540403596 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3'] 128982 18978 VQLAGSGPPQV True PC9_epitope_Rep3 1051.56620882519 1051.5651099358602 78.221 2 -0.5948706116376667 0.17587780453796426 0.99594931605977 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'nc|ENSG00000128159|Q96RT7-2|TUBGCP6', 'ENST00000498611.5_1_22:50657979-50682900:-|nuORF'] 131401 18651 VTHLPVGVTV True PC9_epitope_Rep4 1020.59678067748 1020.59568993586 79.818 2 -0.5949572338378821 0.17592255161377213 0.9959899444990805 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 126422 7730 VLKKKKKKKK True PC9_epitope_Rep6 1254.92274668582 1254.9211049037901 39.088 3 -0.5949853050736171 0.1759272462252642 0.9960031050617986 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 43747 10289 IHHLHEEWLIK True NCI_RA007_Epitope_Rep5 1453.78301830737 1453.7813849037902 46.206 3 -0.595002214125917 0.1759272462252642 0.9960110311346976 ['nc|ENSG00000166548|O00142-5|TK2', 'nc|ENSG00000166548|O00142-2|TK2', 'nc|ENSG00000166548|O00142-3|TK2', 'nc|ENSG00000166548|O00142-4|TK2', 'ENSG00000166548|ENST00000544898|TK2', 'nc|ENSG00000166548|O00142-6|TK2'] 40100 8424 HPVMRRNPF True NCI_RA007_Epitope_Rep4 1152.59746646716 1152.5958149037901 39.217 3 -0.5950685877455897 0.1759272462252642 0.9960421337141019 ['ENSG00000171310|ENST00000303694|CHST11'] 33663 20554 GLGPSSILFF True PC9_epitope_Rep1 1036.5593325395998 1036.55822993586 83.873 2 -0.5950771097120744 0.1759272462252642 0.996046125950441 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 133682 19976 VYAPPVGGFSF True PC9_epitope_Rep6 1139.56514619603 1139.56457496793 89.502 1 -0.5950914260837991 0.17594030229094712 0.9960528320699739 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 132170 9075 VTVPPDVFFF True NCI_RA007_Epitope_Rep5 1166.60119735158 1166.60010993586 41.562 2 -0.5950977870328404 0.17595335794293318 0.9960558114486542 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 5299 14023 ALQIREWRKEK True NCI_RA007_Epitope_Rep1 1455.83103112895 1455.82992993586 58.573 2 -0.5951871399752822 0.17601394169835236 0.9960976476337619 ['INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 117551 8754 TVSGPLAAPPP True H1975_Epitope_Rep3 1005.5494961318899 1005.54838993586 38.676 2 -0.5952116292767146 0.1760428383580742 0.9961091087698787 ['SPATA31E1|p.P1087Qfs*6|1|0.41|ENSG00000177992|chr9:87887746-87887746|C/-|frameshift_variant', 'ENSG00000177992|ENST00000325643|SPATA31E1'] 124612 11011 VGVYYCMQR True NCI_RA007_Epitope_Rep1 1117.5048715219298 1117.5042749679299 46.825 1 -0.5952533505980048 0.17605589176515318 0.9961286295419252 ['nc|ENSG00000273962|A0A087WW87|IGKV2-40'] 83916 7135 PVQDTPVA True NCI_RA007_Epitope_Rep3 825.4232329896099 825.4226849679301 35.186 1 -0.5952800495724327 0.17606894475864582 0.9961411182348943 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 113543 14556 TLTQNQAFSL True PC9_epitope_Rep2 1121.5716881284498 1121.5705899358602 61.261 2 -0.5953192413719536 0.17607362935035722 0.9961594458058066 ['ENSG00000150627|ENST00000508596|WDR17', 'nc|ENSG00000150627|Q8IZU2|WDR17'] 49601 17339 KGAAGFSI True PC9_epitope_Rep2 749.4071890026501 749.40608993586 71.949 2 -0.5953238513285889 0.17607362935035722 0.9961616012233124 ['ENSG00000144029|ENST00000272418|MRPS5'] 58809 15525 LESNKGKSML True PC9_epitope_Rep2 1105.58014463717 1105.5790499358602 64.991 2 -0.5953577312896774 0.17607362935035722 0.9961774396208299 ['ENSG00000271601|ENST00000604000|LIX1L'] 110468 7866 TFETRDLSRLP True H1975_Epitope_Rep3 1333.69901389989 1333.69790993586 35.232 2 -0.5953670549271686 0.17607362935035722 0.9961817975405908 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|261|1|anti-sense'] 93730 8431 RRAALDHS True H1975_Epitope_Rep3 924.488961564 924.48786993586 37.414 2 -0.5954230442130678 0.17614725403538786 0.9962079604316129 ['nc|ENSG00000186638|Q5T7B8-4|KIF24', 'nc|ENSG00000186638|Q5T7B8-2|KIF24', 'ENSG00000186638|ENST00000402558|KIF24'] 74390 16139 NESAVIVAP True PC9_epitope_Rep4 898.4759968384599 898.47544496793 70.018 1 -0.5954381856112855 0.17614725403538786 0.9962150337509631 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 97428 6182 SEEEEEGPPQL True H1975_Epitope_Rep2 1242.5251914284997 1242.52354490379 28.749 3 -0.5955095622734102 0.17617614446380483 0.9962483658325506 ['ENSG00000110237|ENST00000263674|ARHGEF17'] 92966 25498 RPKGKHALA True PC9_epitope_Rep1 976.5930327097199 976.5924849679301 103.07 1 -0.5955222018218979 0.17618640309193437 0.9962542663548867 ['NUFIP2|p.S325L|1|0.09|ENSG00000108256|chr17:29287020-29287020|G/A|missense_variant'] 92967 24575 RPKGKHALA True PC9_epitope_Rep4 976.5930327097199 976.5924849679301 103.02 1 -0.595546180983529 0.17618640309193437 0.9962654588888185 ['NUFIP2|p.S325L|1|0.09|ENSG00000108256|chr17:29287020-29287020|G/A|missense_variant'] 81838 12929 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 54.743 2 -0.5955556269254594 0.17619666107010484 0.9962698672862149 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 118805 7362 VAAFVLRY True PC9_epitope_Rep2 937.53853752537 937.53744993586 33.699 2 -0.5955618679207416 0.17619666107010484 0.9962727797571956 ['CLCN3|p.S365Y|1|0.59|ENSG00000109572|chr4:169697265-169697265|C/A|missense_variant'] 598 8589 AARNELTEL True PC9_epitope_Rep1 1015.5298233164699 1015.52872993586 37.874 2 -0.5956277561859921 0.17620970935297378 0.9963035186340761 ['KRT26|p.E314Gfs*15|1|0.7|ENSG00000186393|chr17:40769784-40769785|-/A|frameshift_variant', 'ENSG00000186393|ENST00000335552|KRT26', 'CON__Q7Z3Y9'] 25626 12314 FENLDQQLR True NCI_RA007_Epitope_Rep1 1161.5778361380499 1161.5767299358602 51.87 2 -0.5956465843838291 0.1762385960466295 0.9963122995130324 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 4693 9958 ALASITETIQV True PC9_epitope_Rep3 1144.6339540318402 1144.6328499358601 43.258 2 -0.5956753304124752 0.17625164325197587 0.9963257031327961 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 69945 4715 LVKTYEYKKA True NCI_RA007_Epitope_Rep1 1241.7019740220096 1241.70031490379 22.422 3 -0.5957008874822135 0.17625910674691161 0.9963376171442195 ['ENSG00000133704|ENST00000256079|IPO8'] 14620 14203 DVANRLEVI True PC9_epitope_Rep3 1027.56620882519 1027.5651099358602 59.718 2 -0.5957036619843061 0.17625910674691161 0.9963389103902016 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000493430.5_1_2:86360492-86361450:+|nuORF', 'ENST00000469585.5_1_2:86355098-86362111:+|nuORF', 'ENST00000487043.5_1_2:86355098-86363686:+|nuORF', 'nc|ENSG00000132300|Q96EY7-2|PTCD3'] 95315 24504 RVRLLPLL True NCI_RA007_Epitope_Rep3 978.6702204012598 978.66912993586 106.03 2 -0.5957316582372819 0.17625910674691161 0.9963519582901641 ['ENSG00000164326|ENST00000296777|CARTPT', 'nc|ENSG00000011478|Q9NXS2-3|QPCTL', 'ENSG00000011478|ENST00000012049|QPCTL'] 13572 18973 DPEDLCTFAYI True H1975_Epitope_Rep2 1285.5536551058099 1285.55254993586 78.755 2 -0.5957993593977103 0.1762879903707575 0.9963834984550074 ['ENSG00000064999|ENST00000360359|ANKS1A'] 56206 19436 LAYYHQEWTV True PC9_epitope_Rep5 1308.6138872936 1308.61225490379 79.811 3 -0.5958931011422521 0.1763327103987837 0.9964271407033061 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 80238 6911 PGAPPGSQP True PC9_epitope_Rep5 806.3922672145 806.39116993586 31.553 2 -0.5959617851799935 0.17634575487385776 0.9964590951811981 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 116836 5603 TVENIKDP True PC9_epitope_Rep1 914.4709114580199 914.46980993586 26.379 2 -0.5960090946956058 0.17635321318848382 0.9964810945270067 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000555062.1_1_14:102514125-102516009:+|nuORF'] 3093 11842 AGACEGKLEL True PC9_epitope_Rep5 989.4851816231699 989.48408993586 50.55 2 -0.5960701148401408 0.17635321318848382 0.9965094562554386 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000460841.1_1_6:31959958-31961603:+|nuORF'] 43566 7284 IGSFSQAEPPE True H1975_Epitope_Rep2 1160.5349682665599 1160.5338699358601 32.956 2 -0.5960752316776078 0.17635321318848382 0.9965118338475263 ['ENST00000273317.4_1_3:45720128-45720437:+|nuORF'] 46272 19248 ISPIIDLH True PC9_epitope_Rep3 906.51746772762 906.51636993586 79.259 2 -0.5960984997553721 0.17636625651258175 0.9965226442770376 ['ENSG00000116221|ENST00000360840|MRPL37'] 46515 11192 ISYAQYEKYLK True NCI_RA007_Epitope_Rep1 1404.72891704584 1404.7278299358602 47.535 2 -0.5961324965282855 0.17637929942357636 0.9965384353773276 ['ENSG00000125780|ENST00000381458|TGM3'] 133884 21224 VYGTLSDLL True PC9_epitope_Rep4 979.5226126777098 979.5220649679301 89.803 1 -0.5962219857359089 0.17640538400633413 0.9965799797062275 ['ENST00000526766.1_1_11:112051504-112052349:+|nuORF', 'ENST00000521458.5_1_8:25298091-25315747:-|nuORF', 'ENSG00000104756|ENST00000221200|KCTD9'] 53101 23374 KPRYRHRLLRH True NCI_RA007_Epitope_Rep1 1530.91201584466 1530.9103649037902 96.234 3 -0.5962275884077071 0.17640538400633413 0.9965825795993002 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'nc|ENSG00000085224|P46100-6|ATRX'] 78139 5417 NWVKYDCEQLR True NCI_RA007_Epitope_Rep2 1452.6819839367597 1452.68032490379 25.69 3 -0.5962563287453811 0.17641563212566505 0.9965959144017246 ['KEAP1|p.R260L|1|0.33|ENSG00000079999|chr19:10492123-10492123|C/A|missense_variant'] 49592 13139 KFYLAFENSL True PC9_epitope_Rep6 1230.6284747285797 1230.62683490379 62.18 3 -0.5962587669662555 0.17641563212566505 0.9965970455203103 ['ENSG00000130383|ENST00000588525|FUT5', 'ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 37325 17954 GVSDVDYSL True PC9_epitope_Rep5 953.43419159613 953.43308993586 74.076 2 -0.5962989179466323 0.17642029260877826 0.9966156685179896 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 12241 12753 DIKEVRIMRWF True H1975_Epitope_Rep1 1491.80203949979 1491.8009499358602 54.114 2 -0.5962990456889142 0.17642029260877826 0.9966157277574031 ['ENST00000357219.3_1_6:37186200-37186806:-|nuORF', 'ENSG00000172738|ENST00000651039|TMEM217', 'nc|ENSG00000172738|Q8N7C4|TMEM217'] 129908 24449 VRSVIGGG True H1975_Epitope_Rep1 743.4289870763898 743.42843496793 101.35 1 -0.5963394042854361 0.17642029260877826 0.9966344403583375 ['nc|ENSG00000073146|Q9BXT6-5|MOV10L1'] 10016 16671 AYQVRDTAI True PC9_epitope_Rep2 1035.5349086969097 1035.53380993586 69.367 2 -0.5963697966921918 0.17642029260877826 0.9966485276193428 ['ENSG00000109991|ENST00000263314|P2RX3'] 79369 4813 PASGQLPSAS True PC9_epitope_Rep3 913.4505103666099 913.44940993586 23.608 2 -0.5963959131308149 0.17644078530715643 0.9966606298633744 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 29212 13064 FTTLGEVAP True NCI_RA007_Epitope_Rep4 933.4807478657299 933.4801949679301 57.349 1 -0.5964174520746965 0.17644078530715643 0.9966706087878257 ['nc|ENSG00000157077|O95405-3|ZFYVE9', 'ENST00000361625.5_1_1:52698878-52729552:+|nuORF', 'nc|ENSG00000157077|O95405-2|ZFYVE9', 'ENSG00000157077|ENST00000287727|ZFYVE9'] 88787 10928 QTRSRWRHLEI True PC9_epitope_Rep3 1480.801127983 1480.79947490379 47.015 3 -0.5964313042501451 0.17644078530715643 0.9966770254381533 ['ENST00000313431.13_2_1:144932113-144932161:-|nuORF'] 34332 5294 GPAVGDAPAP True H1975_Epitope_Rep2 850.4184819623399 850.41738993586 25.419 2 -0.5964336736164664 0.17644078530715643 0.9966781229038596 ['ENSG00000105514|ENST00000222120|RAB3D'] 139906 16079 YPVLLDGVM True NCI_RA007_Epitope_Rep1 1005.52050450273 1005.51940993586 66.647 2 -0.5964630617106352 0.17644823710083435 0.9966917332171251 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 22523 9944 ETHEAFNI True H1975_Epitope_Rep1 959.4348603024699 959.43376993586 43.186 2 -0.5964767241904982 0.17644823710083435 0.9966980594034376 ['nc|ENSG00000166006|Q96PR1-4|KCNC2', 'nc|ENSG00000166006|Q96PR1-5|KCNC2', 'nc|ENSG00000166006|Q96PR1-3|KCNC2', 'nc|ENSG00000166006|Q96PR1-6|KCNC2', 'nc|ENSG00000166006|Q96PR1-2|KCNC2', 'ENSG00000166006|ENST00000549446|KCNC2', 'nc|ENSG00000116396|Q03721-2|KCNC4', 'ENST00000489935.1_1_1:110754121-110766653:+|nuORF', 'ENSG00000116396|ENST00000438661|KCNC4', 'nc|ENSG00000116396|Q03721|KCNC4', 'KCNC2|p.L248M|1|0.11|ENSG00000166006|chr12:75051263-75051263|G/T|missense_variant'] 61607 24126 LKLLKYLLLYS True PC9_epitope_Rep4 1365.86356004385 1365.86191490379 101.29 3 -0.5964803385458223 0.17644823710083435 0.9966997328406361 ['ENST00000545279.5_1_5:135468581-135489282:+|nuORF', 'ENST00000509297.5_1_5:135469533-135483594:+|nuORF'] 41156 5512 HVERYLPKR True NCI_RA007_Epitope_Rep2 1196.6778249628398 1196.67616490379 26.055 3 -0.5965207106555307 0.17647710721296941 0.996718421304616 ['ENST00000355112.7_1_15:91354554-91358468:+|nuORF'] 7682 7754 ASLGIDGTHY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 34.779 2 -0.5965373483143381 0.1764901448587034 0.9967261209749608 ['ENSG00000113657|ENST00000343218|DPYSL3', 'nc|ENSG00000113657|Q14195|DPYSL3'] 66983 12309 LSPFREFQRWK True NCI_RA007_Epitope_Rep1 1492.7939173442398 1492.79282993586 51.85 2 -0.5965461262871055 0.17653204996279703 0.9967301828259588 ['ETFDH|p.P483Sfs*7|1|0.1|ENSG00000171503|chr4:158706349-158706350|-/T|frameshift_variant', 'ENSG00000171503|ENST00000511912|ETFDH', 'nc|ENSG00000171503|Q16134-3|ETFDH'] 30759 17372 GALRLDQLKL True PC9_epitope_Rep5 1125.68699266421 1125.6858899358601 71.822 2 -0.5965833832963238 0.17653204996279703 0.9967474192310661 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000445090.5_1_2:233028172-233195406:+|nuORF', 'nc|ENSG00000144535|Q8IYB7-2|DIS3L2', 'ENST00000498319.2_1_2:233127988-233172255:+|nuORF', 'ENST00000433430.5_1_2:233125383-233196385:+|nuORF'] 138644 17302 YIGGTQIIPF True PC9_epitope_Rep2 1107.5964463243097 1107.5953499358602 71.811 2 -0.5966354493912713 0.17654508611955422 0.9967714970089996 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 15698 20841 EAVRRAFRV True NCI_RA007_Epitope_Rep2 1102.6359601508598 1102.63486993586 86.198 2 -0.5966663297500819 0.17657395241336732 0.9967857720831366 ['MMP15|p.Q560Rfs*65|1|0.18|ENSG00000102996|chr16:58045113-58045113|C/-|frameshift_variant', 'ENSG00000102996|ENST00000219271|MMP15'] 112931 13813 TLLHYSFAF True PC9_epitope_Rep2 1097.5545815123298 1097.5534899358602 58.415 2 -0.5966886690739337 0.17658698749406362 0.9967960963580115 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS', 'nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 95834 21580 RYIRLRFQRIR True NCI_RA007_Epitope_Rep2 1575.9586316839097 1575.95698490379 89.343 3 -0.5967388963019468 0.17659722661938834 0.9968193014340704 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant', 'LAMA2|p.A438Hfs*14|1|0.34|ENSG00000196569|chr6:129177710-129177710|G/-|frameshift_variant'] 18333 7987 EISRIEKEYQV True PC9_epitope_Rep4 1392.72489429456 1392.7232549037901 38.169 3 -0.5968343324107497 0.17659722661938834 0.9968633632301178 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 15062 13119 DYQVKDILL True PC9_epitope_Rep4 1105.60192562757 1105.60082993586 58.356 2 -0.5968484166100592 0.17659907877866945 0.9968698624176757 ['ENST00000463021.1_1_6:99858595-99858832:-|nuORF'] 66613 16024 LSKALADI True H1975_Epitope_Rep3 829.49091862661 829.49037496793 67.093 1 -0.5968592035300545 0.17659907877866945 0.9968748394860981 ['nc|ENSG00000145725|O43314-2|PPIP5K2', 'ENSG00000145725|ENST00000358359|PPIP5K2'] 31346 8679 GDPGFPGG True PC9_epitope_Rep4 702.2973042004999 702.29675496793 40.876 1 -0.5968787138945265 0.17659907877866945 0.996883840255024 ['ENSG00000081052|ENST00000396625|COL4A4'] 136098 10481 WRLLKNYYKWR True PC9_epitope_Rep4 1624.89905111912 1624.89685987172 48.031 4 -0.5969101770370963 0.17659907877866945 0.996898351742065 ['ENSG00000137561|ENST00000260116|TTPA'] 59443 20081 LFPASQYYNL True PC9_epitope_Rep6 1214.5971746003 1214.5960699358602 89.917 2 -0.5969310227963615 0.17659907877866945 0.9969079638827956 ['ENST00000498648.5_1_2:202339356-202340375:+|nuORF'] 69831 15024 LVGSGTTSVTP True H1975_Epitope_Rep2 1017.5342399905701 1017.53314993586 62.939 2 -0.5969815030141741 0.17661675793738724 0.9969312328243757 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 131334 5573 VTGLPKQTP True H1975_Epitope_Rep2 939.53893144819 939.53782993586 26.44 2 -0.5969894112617979 0.17661675793738724 0.9969348771317257 ['ENSG00000138315|ENST00000334011|OIT3'] 75315 14934 NILSDSYW True H1975_Epitope_Rep2 996.4552613938799 996.45471496793 62.596 1 -0.5969987440981415 0.17661675793738724 0.9969391775695442 ['ENSG00000182463|ENST00000371497|TSHZ2', 'nc|ENSG00000182463|Q9NRE2-2|TSHZ2', 'TSHZ2|p.Q489Kfs*4|1|0.15|ENSG00000182463|chr20:53254923-53254923|C/-|frameshift_variant'] 82991 11530 PSGFGLGSSN True H1975_Epitope_Rep3 921.41921023833 921.41866496793 49.476 1 -0.5969996266111915 0.17661675793738724 0.9969395841991388 ['ENSG00000213024|ENST00000352066|NUP62'] 62840 788 LLMCEIPMVEL True NCI_RA007_Epitope_Rep3 1289.6433391406897 1289.64169490379 4.4767 3 -0.597009324596426 0.17661675793738724 0.9969440524486768 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 39599 6407 HLKRRDQYEHS True NCI_RA007_Epitope_Rep1 1467.73310799283 1467.73147490379 28.947 3 -0.5971522700119339 0.176677270784863 0.9970098648665755 ['ENST00000280756.8_1_12:107365296-107365347:+|nuORF'] 109452 8562 TDKTSVQVP True NCI_RA007_Epitope_Rep2 973.5080252427298 973.50692993586 37.948 2 -0.5972248618338549 0.17671915802801297 0.9970432514741066 ['ENSG00000119689|ENST00000334220|DLST', 'ENST00000556582.5_1_14:75348625-75357926:+|nuORF', 'ENST00000555071.5_1_14:75348653-75357926:+|nuORF', 'ENST00000555988.1_2_14:75356010-75360059:+|nuORF'] 79027 19498 PALGPALL True PC9_epitope_Rep4 750.46397560278 750.46286993586 83.118 2 -0.5972273472644452 0.17671915802801297 0.9970443941610039 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'nc|ENSG00000164050|O43157-3|PLXNB1'] 46886 7047 ITLLECDSAPP True H1975_Epitope_Rep3 1157.56382586669 1157.56272993586 32.072 2 -0.5972881187707755 0.17677966638179343 0.99707232545414 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-3|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 27372 13163 FLTTQDIP True H1975_Epitope_Rep2 933.4807478657299 933.4801949679301 55.756 1 -0.5973336471413048 0.17679269469985914 0.9970932398902818 ['ENST00000319264.3_1_9:12775113-12775212:+|nuORF'] 13469 4503 DNGHCIHERWK True NCI_RA007_Epitope_Rep2 1393.6309514234101 1393.6293149037901 22.146 3 -0.5973420968689753 0.17680572260555802 0.9970971204203176 ['LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENST00000496580.1_1_1:53755152-53793476:-|nuORF'] 40998 9791 HTFCDRQKP True NCI_RA007_Epitope_Rep1 1130.52911212382 1130.5280099358602 42.088 2 -0.5974073644758251 0.17685040117742012 0.9971270835631267 ['ENST00000491239.2_1_1:27614218-27630434:+|nuORF', 'nc|ENSG00000142784|Q8N5D0-5|WDTC1', 'nc|ENSG00000142784|Q8N5D0-3|WDTC1', 'nc|ENSG00000142784|Q8N5D0-6|WDTC1', 'nc|ENSG00000142784|Q8N5D0-2|WDTC1', 'WDTC1|p.A659Cfs*5|1|0.16|ENSG00000142784|chr1:27306317-27306318|-/G|frameshift_variant', 'nc|ENSG00000142784|Q8N5D0-4|WDTC1', 'ENSG00000142784|ENST00000319394|WDTC1'] 56505 19338 LDFHLIVKDKT True PC9_epitope_Rep2 1327.7499868435898 1327.7483549037902 79.757 3 -0.5974516275994914 0.17686342775755656 0.9971473928667253 ['ENSG00000182271|ENST00000328886|TMIGD1'] 80672 4981 PGTRRLGSP True H1975_Epitope_Rep3 939.5250127195499 939.52390993586 24.288 2 -0.597542574600158 0.17688947968097227 0.9971890939357835 ['ENST00000380877.7_1_15:50601985-50647294:-|nuORF', 'ENST00000543881.5_1_15:50596308-50647294:-|nuORF', 'ENST00000560825.5_1_15:50601982-50647300:-|nuORF', 'ENST00000558970.2_1_15:50606818-50647294:-|nuORF'] 27034 18572 FLEYSQLAF True PC9_epitope_Rep6 1116.54916177872 1116.5480699358602 84.077 2 -0.5975459779282596 0.17688947968097227 0.9971906536907439 ['ENST00000447998.6_1_5:150089722-150089842:-|nuORF'] 107645 11609 SVQGFFLNH True NCI_RA007_Epitope_Rep3 1047.51377932951 1047.5126899358602 52.789 2 -0.5975661780560889 0.17689690640082284 0.997199910362883 ['nc|ENSG00000180011|Q8N4Q0-2|PTGR3', 'ENSG00000180011|ENST00000322342|PTGR3'] 107682 4201 SVRGNLELRTR True NCI_RA007_Epitope_Rep4 1299.73713074411 1299.7354949037901 22.467 3 -0.597567920243998 0.17689690640082284 0.9972007086287696 ['ENST00000531243.2_1_1:40041622-40042411:-|nuORF'] 54264 3240 KWNWRTKPQSR True NCI_RA007_Epitope_Rep4 1485.79531432657 1485.7936649037902 18.098 3 -0.5975681358375653 0.17689690640082284 0.9972008074121926 ['nc|nan|Q49A92-3|C8orf34', 'nc|nan|Q49A92-2|C8orf34', 'ENSG00000165084|ENST00000518698|C8orf34'] 47134 16480 ITVHHTEVL True PC9_epitope_Rep2 1047.57129420563 1047.57018993586 68.632 2 -0.5975931716993133 0.17690993100829167 0.9972122771970369 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 109665 7032 TEAREEAKP True PC9_epitope_Rep1 1029.5090878718897 1029.50798993586 31.855 2 -0.5976368233791469 0.1769201557011298 0.9972322685527535 ['ENSG00000153208|ENST00000295408|MERTK', 'MERTK|p.N454Yfs*9|1|0.07|ENSG00000153208|chr2:111994314-111994386|AATGCTACGTGCACAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAA/-|frameshift_variant'] 340 9524 AAIKGNQESVK True PC9_epitope_Rep4 1143.62478633047 1143.62368993586 44.245 2 -0.5976456758980058 0.1769201557011298 0.9972363216971973 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 122452 14754 VGEALKTVL True PC9_epitope_Rep6 928.5593325396 928.55822993586 68.701 2 -0.5977041063430717 0.17693317932245764 0.9972630650061032 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'DMD|p.H1690Tfs*31|1|0.14|ENSG00000198947|chrX:32364668-32364668|G/-|frameshift_variant'] 42745 8484 IELLHNIDP True H1975_Epitope_Rep2 1062.5709598524602 1062.5698699358602 37.586 2 -0.5977300264755234 0.17697784810126582 0.9972749233879176 ['nc|ENSG00000113273|P15848-2|ARSB', 'ENSG00000113273|ENST00000264914|ARSB'] 57104 11686 LDSSGVAFAV True H1975_Epitope_Rep2 964.48656152216 964.48546993586 50.023 2 -0.5977762815745826 0.1769852696865655 0.997296077095874 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 114469 13350 TPWPRGRLLTA True PC9_epitope_Rep2 1266.71968977482 1266.7180349037899 56.623 3 -0.5978222962981311 0.1769852696865655 0.9973171108434166 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 22706 8926 ETRVIRWFDYL True H1975_Epitope_Rep3 1496.7775985737599 1496.77650993586 39.331 2 -0.5978520781450141 0.1769852696865655 0.997330719043784 ['nc|ENSG00000144191|Q16281-2|CNGA3', 'ENSG00000144191|ENST00000272602|CNGA3', 'nc|ENSG00000144191|Q16281-3|CNGA3'] 3696 12840 AGRLMAWYY True PC9_epitope_Rep1 1129.53788590237 1129.53678993586 54.263 2 -0.5978601810099651 0.17699829124738942 0.9973344207511103 ['ENSG00000162669|ENST00000370425|HFM1', 'nc|ENSG00000162669|A2PYH4-2|HFM1', 'ENST00000462405.5_1_1:91728075-91813019:-|nuORF'] 105383 24499 SRRTKKIL True NCI_RA007_Epitope_Rep3 1000.6505475858398 1000.64997496793 106.0 1 -0.5978741067983165 0.17701131239617118 0.9973407818685931 ['ENST00000382044.8_1_15:43784217-43784558:-|nuORF'] 59047 16145 LEVRYKFCR True PC9_epitope_Rep5 1212.6437479532399 1212.6426499358602 67.09 2 -0.5979029333147192 0.17704015441572002 0.9973539465052801 ['ENST00000503914.1_1_4:128802289-128804548:+|nuORF'] 87648 13563 QQRQRLWRQFR True H1975_Epitope_Rep1 1600.8811096391998 1600.88000993586 57.296 2 -0.5980646081620704 0.17710063758760897 0.9974277071152132 ['ENST00000600059.5_1_19:48988799-49002658:-|nuORF'] 114462 11099 TPVTNNVT True PC9_epitope_Rep3 844.4290466460401 844.4279499358599 47.689 2 -0.5980810012942377 0.17711365649917732 0.9974351790802478 ['ENST00000265198.8_1_6:154476969-154477143:-|nuORF'] 20845 16410 EQIVTVNDHKR True H1975_Epitope_Rep3 1337.7051619094898 1337.7040699358602 68.598 2 -0.5981660196476993 0.17714249553069975 0.9974739093586383 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'nc|ENSG00000166912|Q9NXD2-3|MTMR10'] 86264 18001 QIQKVQVVV True PC9_epitope_Rep4 1039.6389798426296 1039.6378899358601 77.3 2 -0.5982270978188831 0.17716853079369096 0.9975017118462762 ['ENSG00000143858|ENST00000367268|SYT2', 'ENSG00000067715|ENST00000261205|SYT1'] 87394 14904 QPVQLRVL True PC9_epitope_Rep2 951.5865503469499 951.5860049679301 62.593 1 -0.598232376288843 0.17716853079369096 0.9975041137210806 ['ENSG00000115904|ENST00000402219|SOS1'] 83837 15375 PVLSVSHGI True PC9_epitope_Rep4 907.51271670035 907.51160993586 67.072 2 -0.598282976200786 0.17719736758843257 0.9975271313615095 ['UPP1|p.M110I|1|0.11|ENSG00000183696|chr7:48103305-48103305|G/T|missense_variant'] 127246 20055 VLYEKFFRV True PC9_epitope_Rep5 1199.6702799709099 1199.66863490379 82.196 3 -0.598291619740633 0.17721038394001234 0.9975310620009132 ['ENST00000461947.5_1_16:456939-460388:+|nuORF'] 27343 12869 FLSLPCACSCL True H1975_Epitope_Rep3 1155.51265932431 1155.51156993586 54.724 2 -0.5983535918290184 0.1772392191603126 0.9975592329071935 ['ENST00000342085.8_1_16:2649834-2650143:+|nuORF'] 15333 5603 EAGDAVVAK True H1975_Epitope_Rep3 858.44469671018 858.44358993586 26.592 2 -0.5984168192173366 0.17724662669851465 0.9975879547819776 ['ENSG00000142444|ENST00000270502|TIMM29'] 21315 23171 ERERFYIYRKP True PC9_epitope_Rep2 1555.8259457485096 1555.8248499358601 94.613 2 -0.5984176998568376 0.17724662669851465 0.9975883546833845 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 63265 23552 LLSNKELIL True PC9_epitope_Rep1 1041.64339651673 1041.6422899358602 95.385 2 -0.5985002706622348 0.17724662669851465 0.9976258331251329 ['nc|ENSG00000119703|Q53FD0-2|ZC2HC1C', 'ENSG00000119703|ENST00000524913|ZC2HC1C'] 121445 6029 VEWMQDFEAF True NCI_RA007_Epitope_Rep4 1300.5434247752798 1300.5423299358602 29.809 2 -0.5985347476661445 0.17725964124141858 0.9976414719190828 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'nc|ENSG00000198522|Q9HCN4-2|GPN1', 'nc|ENSG00000198522|Q9HCN4-3|GPN1'] 48458 9489 KAAQVTAG True PC9_epitope_Rep1 744.4130026590799 744.4124549679301 41.356 1 -0.5985897358414642 0.17729587801714594 0.9976664021850123 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 66987 5658 LSPGSGTPQA True PC9_epitope_Rep6 913.45051036661 913.44940993586 29.867 2 -0.5985940527397452 0.17729587801714594 0.9976683587114135 ['nc|ENSG00000125744|O75298-2|RTN2', 'ENSG00000125744|ENST00000245923|RTN2'] 101040 9528 SLGEGHLSV True PC9_epitope_Rep5 897.45559574705 897.45448993586 41.608 2 -0.5986624171304448 0.17729587801714594 0.9976993305537952 ['ENSG00000124942|ENST00000378024|AHNAK'] 56162 10048 LAVSDALYAA True H1975_Epitope_Rep1 992.51786165044 992.51676993586 43.589 2 -0.5986817128821843 0.17729587801714594 0.9977080680081158 ['ENSG00000175591|ENST00000393597|P2RY2'] 75293 10494 NIKEYRDSFSY True H1975_Epitope_Rep1 1420.6622940379998 1420.6611899358602 45.319 2 -0.5987825288836813 0.17732470778039638 0.9977536882875235 ['ENST00000424738.1_1_10:117226695-117357303:+|nuORF', 'ENSG00000107518|ENST00000355044|ATRNL1'] 123689 10348 VGRAGWGPT True PC9_epitope_Rep4 899.4613498338299 899.46024993586 47.499 2 -0.5988798271106706 0.17736935341009744 0.9977976671422726 ['ENST00000497675.2_1_1:2124722-2124944:-|nuORF'] 56883 7817 LDPSRESIP True H1975_Epitope_Rep2 1012.5189242795999 1012.51782993586 35.015 2 -0.599019429245418 0.17745583374191407 0.9978606815172977 ['nc|ENSG00000291104|Q96KV6|BTN2A3P'] 91787 23295 RKGKKKKRWH True PC9_epitope_Rep6 1350.8472903297798 1350.8461899358601 102.71 2 -0.5990316971808614 0.17745583374191407 0.9978662142150522 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 71647 10534 MDYDSYQHYFY True H1975_Epitope_Rep3 1530.5761814555403 1530.57454490379 45.586 3 -0.5990805875511409 0.17745583374191407 0.9978882553519737 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL', 'nc|ENSG00000116990|P12524-2|MYCL'] 75371 23791 NISVPGLQ True NCI_RA007_Epitope_Rep4 826.45486747106 826.45376993586 103.14 2 -0.5991673962295757 0.17749205294871187 0.9979273600370172 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF', 'nc|ENSG00000131023|O95835-2|LATS1'] 18049 14340 EIFGKATSIDP True H1975_Epitope_Rep2 1176.60265390356 1176.60154993586 60.309 2 -0.5991894771370518 0.17749205294871187 0.9979373004483157 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 83257 5513 PSYSSRTPG True PC9_epitope_Rep4 950.4457593393399 950.44466993586 27.965 2 -0.5991979392220188 0.17749205294871187 0.9979411092337479 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 123405 11710 VGNALLNVVL True NCI_RA007_Epitope_Rep3 1010.61243074162 1010.61132993586 53.174 2 -0.5992152670262499 0.17749205294871187 0.9979489072913714 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 79975 10999 PEVLKSKL True PC9_epitope_Rep1 912.56441792004 912.56332993586 47.196 2 -0.5992349137677111 0.17750506072874495 0.9979577470085556 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 19155 7820 ELHIFQIKG True H1975_Epitope_Rep3 1083.60767971435 1083.60658993586 35.058 2 -0.5992630819820494 0.17751245354629555 0.997970417223328 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'ZNF808|p.Y483Lfs*8|1|0.09|ENSG00000198482|chr19:52554363-52554364|-/TGTCACATTCTTC|frameshift_variant', 'ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808'] 38562 3324 HETQPLLNLK True NCI_RA007_Epitope_Rep2 1191.6611718391898 1191.65953490379 17.592 3 -0.599295275464844 0.17751245354629555 0.997984892828975 ['ENST00000496911.1_1_2:74733844-74734286:-|nuORF', 'ENST00000480844.2_1_2:74732736-74734502:-|nuORF', 'nc|ENSG00000115289|Q9BSM1-3|PCGF1', 'ENST00000475863.5_1_2:74732272-74734286:-|nuORF', 'ENSG00000115289|ENST00000233630|PCGF1'] 26767 19916 FKGRWFWRVRH True PC9_epitope_Rep3 1573.8531039862098 1573.8514649037902 81.848 3 -0.5993160879237169 0.17751245354629555 0.9979942480693956 ['MMP15|p.Q560Rfs*65|1|0.18|ENSG00000102996|chr16:58045113-58045113|C/-|frameshift_variant', 'ENSG00000102996|ENST00000219271|MMP15'] 269 4959 AAGKAEAEAA True H1975_Epitope_Rep2 887.4348603024698 887.43376993586 24.158 2 -0.5993655966215186 0.17752265287727123 0.9980164929697173 ['ENST00000405914.1_1_2:26204855-26205579:-|nuORF'] 3 5311 AAAAAAAAAAA True PC9_epitope_Rep2 799.41881631551 799.41770993586 25.818 2 -0.5993717137813794 0.17752265287727123 0.9980192405728805 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000125285|ENST00000376945|SOX21', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'ENSG00000170113|ENST00000337435|NIPA1', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000112183|ENST00000379052|RBM24', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'ENSG00000188620|ENST00000357878|HMX3', 'nc|ENSG00000163508|O95936|EOMES', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.V449A|1|0.32|ENSG00000103495|chr16:29810143-29810143|T/C|missense_variant', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'LCORL|p.Q167Hfs*25|1|0.12|ENSG00000178177|chr4:17909275-17909275|T/-|frameshift_variant', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000135414|ENST00000257868|GDF11', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'SKIDA1|p.P851Sfs*24|1|0.12|ENSG00000180592|chr10:21515272-21515273|-/A|frameshift_variant', 'ENSG00000180592|ENST00000449193|SKIDA1', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000004848|ENST00000379044|ARX', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'PHLPP1|p.H1037Ifs*2|1|0.16|ENSG00000081913|chr18:62941862-62941862|C/-|frameshift_variant', 'ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000171862|P60484-2|PTEN', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000087095|ENST00000407008|NLK', 'SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant', 'ENSG00000113318|ENST00000265081|MSH3', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000121068|ENST00000240328|TBX2', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'RUNX2|p.F182Hfs*9|1|0.06|ENSG00000124813|chr6:45431982-45431983|-/CACATCAGAAAGGC|frameshift_variant', 'RUNX2|p.R181Ifs*39|1|0.05|ENSG00000124813|chr6:45431980-45431981|-/TAAT|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant', 'HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13', 'nc|ENSG00000154118|Q8WXH2-2|JPH3'] 41879 19042 ICFFIMGFP True NCI_RA007_Epitope_Rep2 1073.50783164405 1073.5067299358602 78.921 2 -0.5994018940007907 0.1775356589392454 0.9980327934611771 ['nc|ENSG00000165970|Q9Y345-2|SLC6A5', 'nc|ENSG00000165970|Q9Y345-3|SLC6A5', 'ENSG00000165970|ENST00000525748|SLC6A5'] 84140 10484 PYEEGPGPGP True H1975_Epitope_Rep2 998.4345259492998 998.43342993586 45.345 2 -0.5994155176536535 0.17755324699966796 0.9980389097581114 ['nc|ENSG00000125740|P53539-9|FOSB', 'nc|ENSG00000125740|P53539-8|FOSB', 'ENST00000587358.1_1_19:45974364-45976267:+|nuORF', 'nc|ENSG00000125740|P53539-11|FOSB', 'nc|ENSG00000125740|P53539-7|FOSB', 'nc|ENSG00000125740|P53539-6|FOSB', 'nc|ENSG00000125740|P53539-5|FOSB', 'nc|ENSG00000125740|P53539-10|FOSB', 'nc|ENSG00000125740|P53539-4|FOSB', 'nc|ENSG00000125740|P53539-3|FOSB', 'nc|ENSG00000125740|P53539-2|FOSB', 'ENSG00000125740|ENST00000353609|FOSB'] 118019 5425 TYEDGSDSRDK True NCI_RA007_Epitope_Rep1 1271.52658841083 1271.52493490379 25.174 3 -0.5994465321920315 0.17755324699966796 0.9980528298916859 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 142189 11989 YVVAAEEVWD True H1975_Epitope_Rep1 1179.5448046742697 1179.54427496793 51.122 1 -0.599451414864144 0.17755324699966796 0.9980550208871639 ['ENSG00000189433|ENST00000339480|GJB4'] 57332 6037 LEAEIAHSQV True H1975_Epitope_Rep3 1095.55603806431 1095.5549499358601 28.237 2 -0.5994791533490456 0.17755324699966796 0.9980674654868316 ['nc|ENSG00000096872|Q96LB3-2|IFT74', 'ENSG00000096872|ENST00000380062|IFT74'] 64387 19484 LPLPPPQLSI True PC9_epitope_Rep4 1073.6484818971699 1073.64738993586 83.061 2 -0.5994839708472788 0.17755324699966796 0.9980696263840202 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 114954 19941 TQVEGLTVV True PC9_epitope_Rep2 944.5178616504398 944.51731496793 82.1 1 -0.5995708828822209 0.1776266898569057 0.9981085891955205 ['nc|ENSG00000196188|P14091-3|CTSE'] 94321 2872 RRRKRKKRK True NCI_RA007_Epitope_Rep1 1310.8959718576996 1310.89432490379 14.995 3 -0.5995804988312872 0.1776266898569057 0.9981128975048099 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 108858 6961 TAAAEQLSP True H1975_Epitope_Rep2 886.4396113297399 886.4390649679301 31.695 1 -0.5996626263591857 0.17765550390538531 0.9981496730580764 ['ENSG00000165556|ENST00000381020|CDX2'] 23400 13466 EVSHRFREL True PC9_epitope_Rep1 1171.60980497267 1171.60816490379 56.654 3 -0.5996986440852089 0.17766850601609563 0.9981657895660555 ['ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENST00000473267.1_1_1:155720377-155721671:-|nuORF'] 27496 17404 FMFFILLNMFL True PC9_epitope_Rep6 1434.7443735112995 1434.74272490379 79.559 3 -0.5997327420995414 0.17769627217251083 0.9981810404657818 ['nc|ENSG00000118762|Q13563-5|PKD2', 'nc|ENSG00000118762|Q13563-3|PKD2', 'ENSG00000118762|ENST00000237596|PKD2'] 101780 15922 SLPAAQYCL True PC9_epitope_Rep1 964.46880328304 964.46770993586 66.054 2 -0.5997566780467545 0.17769627217251083 0.9981917423614352 ['ENSG00000170638|ENST00000380909|TRABD', 'nc|ENSG00000170638|Q9H4I3-2|TRABD', 'ENST00000463233.1_1_22:50636418-50636945:+|nuORF'] 125088 10164 VIEGVNTP True PC9_epitope_Rep6 827.43888305375 827.43778993586 49.727 2 -0.5997611960046935 0.17769627217251083 0.9981937620086102 ['ENSG00000186280|ENST00000335080|KDM4D', 'KDM4D|p.T211Lfs*54|1|0.2|ENSG00000186280|chr11:94997997-94997997|C/-|frameshift_variant', 'ENSG00000235268|ENST00000450979|KDM4E', 'ENSG00000255855|ENST00000545950|KDM4F'] 18026 12827 EIELVIHRLEA True NCI_RA007_Epitope_Rep1 1320.7401504358802 1320.73904993586 53.883 2 -0.5997805706198702 0.17769627217251083 0.9982024216888012 ['nc|ENSG00000141577|Q9UPN4-3|CEP131', 'ENSG00000141577|ENST00000450824|CEP131', 'nc|ENSG00000141577|Q9UPN4|CEP131'] 30393 4146 GAEEEEDRKAR True NCI_RA007_Epitope_Rep2 1288.6007564105998 1288.59964993586 20.766 2 -0.5998003885737923 0.17769627217251083 0.9982112773613185 ['ZBTB16|p.E390Gfs*26|1|0.23|ENSG00000109906|chr11:114064463-114064464|-/G|frameshift_variant', 'ENST00000541602.5_1_11:113934022-114057819:+|nuORF', 'nc|ENSG00000109906|Q05516-2|ZBTB16', 'ENSG00000109906|ENST00000335953|ZBTB16'] 1676 9329 AEGAVRRWQLW True H1975_Epitope_Rep1 1370.7207524039798 1370.7196499358602 40.791 2 -0.5998236462832918 0.17769627217251083 0.998221667298362 ['ENST00000203630.9_2_12:6861510-6862293:-|nuORF'] 125342 8513 VIQEKEKKGKE True NCI_RA007_Epitope_Rep2 1314.7507151195798 1314.74960993586 37.759 2 -0.5998469325119612 0.17769627217251083 0.998232066948267 ['ENSG00000089048|ENST00000617257|ESF1'] 46159 8500 ISLIRQRF True NCI_RA007_Epitope_Rep5 1031.6239984848298 1031.6229099358602 39.379 2 -0.5998574807365258 0.1777008441620032 0.9982367767960943 ['ENSG00000121058|ENST00000240316|COIL'] 79625 10706 PDLVNVIK True H1975_Epitope_Rep1 896.53311779176 896.53202993586 46.14 2 -0.5998681308630398 0.1777008441620032 0.9982415315114738 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000493342.1_1_X:24745055-24752029:+|nuORF'] 44902 14804 INNFKYIF True PC9_epitope_Rep2 1057.5596668927699 1057.55856993586 62.208 2 -0.5998681917979155 0.1777008441620032 0.9982415587138278 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ATR|p.V1555Efs*36|1|0.04|ENSG00000175054|chr3:142512421-142512448|ATGGTATGCTGATCGTCATGCTTTAGAA/-|frameshift_variant'] 90743 3374 RERPPEEVAA True NCI_RA007_Epitope_Rep3 1152.58873517492 1152.5870849037901 18.837 3 -0.5998944639255995 0.1777008441620032 0.9982532850932667 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 65443 4402 LRHRFPLRMSR True NCI_RA007_Epitope_Rep2 1467.83573966991 1467.8341049037901 21.759 3 -0.5999526622869176 0.1777110338286437 0.9982792477034013 ['ENST00000471215.1_1_7:73111917-73112213:+|nuORF'] 129799 25470 VRRLKVSK True NCI_RA007_Epitope_Rep3 984.6556329662799 984.6550849679301 110.11 1 -0.5999726713863801 0.1777110338286437 0.9982881694623776 ['ENST00000466078.1_1_13:33222909-33223050:+|nuORF'] 128566 12876 VPTIQGEP True PC9_epitope_Rep1 839.4388830537499 839.43778993586 54.401 2 -0.5999943126369638 0.1777212228510006 0.9982978164260962 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'WNK1|p.L900Afs*27|1|0.06|ENSG00000060237|chr12:879896-879897|TC/-|frameshift_variant'] 135912 13409 WPRLALPFST True NCI_RA007_Epitope_Rep5 1186.6498788794997 1186.6482449037899 58.263 3 -0.600001770153037 0.1777212228510006 0.9983011401295612 ['ENST00000344823.9_1_16:3451289-3451709:+|nuORF'] 29315 16094 FVDEHTINI True PC9_epitope_Rep1 1086.53457434374 1086.53346993586 66.722 2 -0.60006263539294 0.1777658346901032 0.9983282550644227 ['ENSG00000123384|ENST00000243077|LRP1', 'nc|ENSG00000123384|Q07954-2|LRP1'] 53486 12601 KRIDSVYLDPL True NCI_RA007_Epitope_Rep1 1317.7292513990099 1317.72814993586 52.998 2 -0.6001242700222787 0.1777918280249743 0.9983556912730039 ['ENSG00000105928|ENST00000645220|GSDME', 'nc|ENSG00000105928|O60443-3|GSDME'] 61167 19459 LIKTDESV True PC9_epitope_Rep5 903.49131254943 903.49020993586 79.902 2 -0.6001292853922197 0.1777918280249743 0.9983579228743953 ['ENSG00000119636|ENST00000394009|BBOF1'] 37819 22921 GYHDKKRMQK True NCI_RA007_Epitope_Rep1 1289.66627430297 1289.6651699358601 94.1 2 -0.600219913123432 0.17780482407612302 0.998398223068561 ['WFDC10A|p.R24H|1|0.23|ENSG00000180305|chr20:45629884-45629884|G/A|missense_variant'] 95496 7724 RWPHWSWCSRR True PC9_epitope_Rep5 1555.73675390463 1555.73509490379 34.652 3 -0.6002334421624189 0.17781781971643984 0.9984042350903306 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 95836 23959 RYIRLRFQRIR True PC9_epitope_Rep5 1575.9586316839097 1575.95698490379 97.14 3 -0.6002442199572227 0.17782238308229678 0.998409023761727 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant', 'LAMA2|p.A438Hfs*14|1|0.34|ENSG00000196569|chr6:129177710-129177710|G/-|frameshift_variant'] 129981 24391 VRVSGAGGG True PC9_epitope_Rep4 758.4035006045399 758.4029549679301 102.3 1 -0.6002664433466994 0.17782238308229678 0.9984188956978112 ['ENST00000227752.7_1_11:117870452-117870800:+|nuORF'] 95835 24015 RYIRLRFQRIR True PC9_epitope_Rep1 1575.9586316839097 1575.95698490379 97.182 3 -0.600276477347428 0.17782238308229678 0.9984233520043558 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant', 'LAMA2|p.A438Hfs*14|1|0.34|ENSG00000196569|chr6:129177710-129177710|G/-|frameshift_variant'] 99645 19377 SIFSSDLYD True PC9_epitope_Rep2 1045.46040634397 1045.4593099358601 79.911 2 -0.6002826351674272 0.17782238308229678 0.9984260865308535 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 114267 12687 TPNSYLTQAP True PC9_epitope_Rep2 1090.5294889633 1090.52838993586 54.108 2 -0.6002960108499352 0.17783256681364878 0.9984320255649469 ['nc|ENSG00000258537|P0C7T7|FRMD6-AS1'] 52401 19450 KKPFSIEEV True PC9_epitope_Rep2 1075.5913609438699 1075.59077496793 80.195 1 -0.6003402016609665 0.17783256681364878 0.9984516396758246 ['ADH1A|p.E28Q|1|0.09|ENSG00000187758|chr4:99287602-99287602|C/G|missense_variant', 'ENSG00000248144|ENST00000515683|ADH1C', 'ENSG00000187758|ENST00000209668|ADH1A'] 120806 22673 VELKKQYAI True PC9_epitope_Rep1 1090.63864548946 1090.63754993586 92.015 2 -0.6004165588491792 0.1778771691374024 0.9984855040815911 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 63257 12135 LLSNDEVTIK True PC9_epitope_Rep3 1130.6183039677 1130.61720993586 51.718 2 -0.6005114822334519 0.17791895821480497 0.9985275550628222 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 136537 4956 WWFFHRHFHIP True NCI_RA007_Epitope_Rep1 1608.78910674732 1608.78689987172 23.361 4 -0.6005517815337459 0.17791895821480497 0.9985453916053509 ['ENST00000296257.9_1_3:185344110-185347744:+|nuORF'] 70089 24343 LVPAMLWGL True PC9_epitope_Rep1 998.5623097450599 998.56120993586 98.465 2 -0.6005848773073391 0.1779477535281382 0.9985600326860148 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 79510 7158 PCEWDWHPG True PC9_epitope_Rep3 1125.4338147566498 1125.4327099358602 32.546 2 -0.6006054266736639 0.17797654793135054 0.9985691201611554 ['ENST00000377259.5_2_9:71766567-71833305:+|nuORF'] 22196 5168 ESVLGGPAK True NCI_RA007_Epitope_Rep2 856.4654321547599 856.46432993586 24.723 2 -0.6006915716148392 0.17799409003997915 0.9986071884620862 ['ENST00000423485.5_1_17:38557145-38557208:-|nuORF'] 122453 8581 VGEAQETEAAP True NCI_RA007_Epitope_Rep2 1100.4985827578398 1100.4974899358601 38.022 2 -0.6006950257077227 0.17799409003997915 0.9986087139388944 ['nc|ENSG00000182938|Q7RTS5|OTOP3'] 129889 23749 VRSKGRKF True NCI_RA007_Epitope_Rep4 976.5930327097199 976.5924849679301 102.97 1 -0.600712963916845 0.17799409003997915 0.998616635082937 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 69176 13832 LTSASKIF True PC9_epitope_Rep4 865.49091862661 865.48982993586 61.102 2 -0.6007180646865307 0.17799409003997915 0.9986188871270217 ['ENSG00000155761|ENST00000336338|SPAG17', 'SPAG17|p.Q1045Afs*3|1|0.19|ENSG00000155761|chr1:118040763-118040764|-/C|frameshift_variant', 'SPAG17|p.V1065*|1|0.21|ENSG00000155761|chr1:118039418-118039418|C/-|frameshift_variant'] 62839 292 LLMCEIPMVEL True NCI_RA007_Epitope_Rep3 1289.6433391406897 1289.64169490379 1.669 3 -0.6007386228826944 0.17799409003997915 0.9986279622127985 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 7852 12406 ASYYKYWEKKI True NCI_RA007_Epitope_Rep5 1477.7605515272896 1477.7594499358602 54.376 2 -0.6007453746602676 0.17800426641384215 0.9986309421251301 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.F1569Sfs*24|1|0.14|ENSG00000197653|chr12:123838611-123838611|C/-|frameshift_variant', 'DNAH10|p.K1629Rfs*13|1|0.48|ENSG00000197653|chr12:123841424-123841424|A/-|frameshift_variant', 'ENST00000467219.5_1_12:124265674-124298205:+|nuORF', 'nc|ENSG00000197653|Q8IVF4-2|DNAH10'] 120107 18968 VDYNYPATL True PC9_epitope_Rep4 1054.49712620586 1054.4960299358602 81.05 2 -0.6007569068161325 0.17800426641384215 0.9986360312369849 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 129891 24938 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 103.42 1 -0.6008252927413217 0.17804604421129142 0.9986661933799251 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 2591 3693 AEREELRNL True H1975_Epitope_Rep1 1128.58873517492 1128.5870849037901 18.681 3 -0.6008361297140077 0.17804604421129142 0.9986709705294288 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2'] 12627 4933 DLAPTPQVR True H1975_Epitope_Rep1 995.5399940773499 995.53888993586 24.05 2 -0.6009519453238629 0.1780737510664518 0.9987219800042574 ['ENSG00000260734|ENST00000561754|TLE7'] 62347 11797 LLGLHEEGLRK True H1975_Epitope_Rep3 1263.72992010535 1263.7288299358602 50.524 2 -0.6010108322183725 0.1780737510664518 0.9987478847529114 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4', 'ENST00000562200.5_1_16:70543798-70557434:-|nuORF'] 31654 9299 GEFREGWHMQR True PC9_epitope_Rep1 1431.6466014875498 1431.64495490379 40.623 3 -0.6010132757229335 0.1780737510664518 0.9987489592106735 ['MUC4|p.V4635M|1|0.21|ENSG00000145113|chr3:195765018-195765018|C/T|missense_variant'] 16338 12254 EEHRPLLL True PC9_epitope_Rep5 1005.5607295219298 1005.55962993586 52.122 2 -0.6010160798719055 0.1780737510664518 0.998750192206079 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 76320 10219 NPSSSEEEPSP True PC9_epitope_Rep5 1158.46767655238 1158.4665699358602 44.295 2 -0.601039281314453 0.1780737510664518 0.9987603921296335 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2'] 32969 7610 GIEANLQEKPT True H1975_Epitope_Rep1 1198.61936659686 1198.61826993586 34.264 2 -0.6010397888828832 0.1780737510664518 0.9987606152323992 ['ENST00000487003.5_1_2:135927369-135933054:+|nuORF'] 13066 10900 DLPIDECEGP True H1975_Epitope_Rep1 1086.45394106454 1086.45284993586 46.889 2 -0.601050355767877 0.1780737510664518 0.9987652595709262 ['ADAMTSL1|p.C1678Vfs*28|1|0.41|ENSG00000178031|chr9:18906759-18906760|-/T|frameshift_variant', 'ADAMTSL1|p.N1700Tfs*41|1|0.33|ENSG00000178031|chr9:18906826-18906826|C/-|frameshift_variant', 'ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF'] 129892 25044 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 103.83 1 -0.601077477089736 0.17808392315470173 0.9987771767573052 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 98636 8934 SFYEFFIT True NCI_RA007_Epitope_Rep5 1052.4854988929999 1052.4844099358602 41.026 2 -0.6010779171897258 0.17808392315470173 0.998777370101336 ['ENSG00000145623|ENST00000274276|OSMR'] 71517 19724 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.79936993586 81.678 2 -0.6010997387680936 0.1781042654028436 0.9987869552325223 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 93570 5630 RQLREYQEL True NCI_RA007_Epitope_Rep5 1233.6465844042098 1233.64492490379 28.343 3 -0.6011063485492779 0.1781042654028436 0.9987898580029535 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9NSB2', 'CON__H-INV:HIT000292931'] 27431 21673 FLYPFPLAL True NCI_RA007_Epitope_Rep4 1079.60555445603 1079.60497496793 93.962 1 -0.601119515599973 0.1781042654028436 0.9987956396825585 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 86642 4584 QLFTTELGRWS True NCI_RA007_Epitope_Rep2 1336.67755017932 1336.67590490379 22.456 3 -0.6011678414244467 0.1781042654028436 0.9988168505084183 ['ENST00000491583.1_1_3:75475229-75475748:-|nuORF'] 55371 5586 LAEPM[Oxidation]TYKLM[Oxidation] True NCI_RA007_Epitope_Rep1 1227.58793320043 1227.5868299358601 25.796 2 -0.6012146839046085 0.1781302328520426 0.9988373965215186 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 23484 7783 EVVDDEEFDWE True H1975_Epitope_Rep2 1410.5463207958999 1410.5446649037901 34.884 3 -0.601239399400038 0.1781302328520426 0.998848231741426 ['ENSG00000144736|ENST00000325599|SHQ1', 'nc|ENSG00000144736|Q6PI26-2|SHQ1'] 94313 19365 RRRKKRHPQR True NCI_RA007_Epitope_Rep3 1416.8762990422797 1416.87520993586 84.526 2 -0.6012907789487755 0.1781680908530903 0.9988707442934412 ['ENST00000338745.10_3_3:18466531-18466693:-|nuORF', 'ENST00000450898.1_1_3:18465198-18466693:-|nuORF'] 129893 25135 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 104.18 1 -0.6012927564115532 0.1781680908530903 0.9988716104139697 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 55558 13700 LAGSLGAPL True NCI_RA007_Epitope_Rep4 797.46470387877 797.46360993586 59.921 2 -0.6012929685700635 0.1781680908530903 0.998871703337075 ['ENST00000336798.11_2_1:31344561-31344780:-|nuORF'] 139363 11507 YLLSRILCAP True NCI_RA007_Epitope_Rep1 1147.64235097091 1147.64124993586 48.726 2 -0.60133809574977 0.1781680908530903 0.9988914621727113 ['ENST00000379066.5_1_2:37543393-37543606:-|nuORF'] 105367 22308 SRRLAPVG True PC9_epitope_Rep1 854.5086343794198 854.50752993586 90.619 2 -0.6013507009185792 0.1781680908530903 0.9988969790474059 ['ENST00000464942.6_1_12:122710297-122710606:-|nuORF'] 136065 19996 WRGRLRGA True NCI_RA007_Epitope_Rep2 970.5573159073398 970.55620993586 82.782 2 -0.6013607380110562 0.1781680908530903 0.9989013712479646 ['ENSG00000164975|ENST00000380821|SNAPC3'] 32337 17388 GFGFVTFDD True NCI_RA007_Epitope_Rep4 1003.4287122928699 1003.4281749679301 75.297 1 -0.6013630293265152 0.1781680908530903 0.9989023738321821 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 47047 12200 ITRVTLRGPD True H1975_Epitope_Rep1 1126.64585612822 1126.64474993586 51.947 2 -0.6014083651709576 0.1781680908530903 0.998922204149195 ['SRPX2|p.E227D|1|0.07|ENSG00000102359|chrX:100665557-100665557|G/T|missense_variant'] 41553 19266 HYSLDDWKLF True NCI_RA007_Epitope_Rep3 1322.6295373577398 1322.62844993586 84.126 2 -0.6014175940771669 0.1781680908530903 0.9989262393792596 ['ENSG00000137198|ENST00000259727|GMPR'] 13277 5855 DLTEDQLPSY True H1975_Epitope_Rep3 1179.52954853295 1179.5284499358602 27.535 2 -0.6014435048489831 0.1781810715188274 0.9989375656979381 ['ENSG00000226784|ENST00000458128|PGAM4'] 101843 11955 SLPKAHTVP True PC9_epitope_Rep3 948.53926580136 948.53816993586 51.007 2 -0.6014888643285305 0.17819405177451708 0.9989573834147117 ['ENSG00000268964|ENST00000601417|ERVV-2'] 114471 15136 TPWPRGRLLTA True PC9_epitope_Rep5 1266.71968977482 1266.7180349037899 63.226 3 -0.6017564494847477 0.17830179739078245 0.9990740267503223 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 46726 13548 ITEGINEAVL True PC9_epitope_Rep1 1057.5655401188499 1057.56444993586 56.968 2 -0.6017948948476316 0.17830632679490824 0.9990907478982896 ['ENSG00000169154|ENST00000307599|GOT1L1'] 22815 5956 EVAAVAVLMC True PC9_epitope_Rep5 1004.5034745395999 1004.5029749679301 27.905 1 -0.6018193521596334 0.17830632679490824 0.9991013802296698 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 140780 10299 YSDHYGLYH True H1975_Epitope_Rep2 1153.48287312405 1153.48176993586 44.621 2 -0.6018233102641058 0.17830632679490824 0.9991031005743055 ['ENSG00000130590|ENST00000369886|SAMD10', 'ENST00000478694.1_1_20:62606865-62609703:-|nuORF'] 3608 9308 AGPAIPTPA True PC9_epitope_Rep5 793.43340375049 793.43230993586 40.756 2 -0.6018369058951045 0.17830632679490824 0.9991090089885868 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2', 'ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 61667 24095 LKRRKRIARRL True NCI_RA007_Epitope_Rep4 1464.9953515457998 1464.99370490379 104.46 3 -0.6019573174349435 0.17833228048010108 0.9991612853971291 ['nc|ENSG00000171320|Q56NI9-2|ESCO2', 'ENSG00000171320|ENST00000305188|ESCO2'] 104886 3414 SRCRWYLCRRC True H1975_Epitope_Rep3 1500.70129699604 1500.6996449037902 17.966 3 -0.6019890495969804 0.17833228048010108 0.9991750461524066 ['ENST00000262039.8_1_18:39535171-39535288:+|nuORF'] 63909 16943 LNQEYSQQF True PC9_epitope_Rep4 1155.51965255559 1155.5185499358602 73.162 2 -0.6021308747542827 0.17839263435511127 0.9992364685523409 ['ENSG00000139351|ENST00000392924|SYCP3'] 139222 21943 YLFNENFHLL True PC9_epitope_Rep5 1308.65027280232 1308.64916993586 89.446 2 -0.6022092281017997 0.17848175228589927 0.9992703454764866 ['ENST00000368520.1_1_10:135345455-135368187:+|nuORF', 'ENSG00000130649|ENST00000252945|CYP2E1'] 78238 20185 NYGQYFTLW True NCI_RA007_Epitope_Rep1 1190.53965972418 1190.53907496793 82.723 1 -0.6022107292419778 0.17848175228589927 0.9992709941144604 ['ENSG00000109929|ENST00000264027|SC5D'] 119072 8905 VAGLGSKPLIS True NCI_RA007_Epitope_Rep1 1040.62299542532 1040.62188993586 38.638 2 -0.6022557542189328 0.17850769838136596 0.9992904423207052 ['nc|ENSG00000112763|Q7KYR7-5|BTN2A1', 'ENSG00000112763|ENST00000312541|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-1|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-6|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-4|BTN2A1'] 37445 6538 GVTLKFQIKP True NCI_RA007_Epitope_Rep3 1129.68593003505 1129.68427490379 32.761 3 -0.6022689586725004 0.17850769838136596 0.9992961433343228 ['nc|ENSG00000220201|P0C6A0-1|ZGLP1', 'ENSG00000220201|ENST00000707000|ZGLP1'] 94314 20012 RRRKKRHPQR True NCI_RA007_Epitope_Rep4 1416.8762990422797 1416.87520993586 86.544 2 -0.602302591665754 0.17851503284487114 0.9993106591155274 ['ENST00000338745.10_3_3:18466531-18466693:-|nuORF', 'ENST00000450898.1_1_3:18465198-18466693:-|nuORF'] 89046 22609 QVLLHPRRG True PC9_epitope_Rep4 1074.6410455312998 1074.6399499358602 95.197 2 -0.6023039711561549 0.17851503284487114 0.9993112543337782 ['ENST00000579152.1_1_17:17398683-17399571:-|nuORF'] 136761 12165 WYQTKFETL True NCI_RA007_Epitope_Rep4 1214.5971746002997 1214.5960699358602 53.792 2 -0.6023108167344635 0.17851503284487114 0.9993142078550624 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'KRT7|p.A281V|1|0.17|ENSG00000135480|chr12:52241620-52241620|C/T|missense_variant'] 102322 9336 SLSRHTRP True H1975_Epitope_Rep1 952.52026169228 952.51916993586 40.819 2 -0.6024581775303597 0.1785753762099512 0.9993777105990936 ['TRIP10|p.A487T|1|0.06|ENSG00000125733|chr19:6750355-6750355|G/A|missense_variant'] 13123 5980 DLQTQMRRQKR True H1975_Epitope_Rep3 1458.7837636666998 1458.78211490379 28.013 3 -0.602505290187985 0.178582707004358 0.9993979822592403 ['ENST00000274853.7_1_6:30655239-30655527:-|nuORF'] 85612 14506 QGIYGVPHSTL True PC9_epitope_Rep1 1170.6033226098998 1170.6022299358601 60.622 2 -0.6025722019238487 0.178582707004358 0.9994267473054539 ['nc|ENSG00000178177|Q8N3X6|LCORL', 'nc|ENSG00000178177|Q8N3X6-2|LCORL'] 59958 6567 LGGVKREPP True H1975_Epitope_Rep3 951.5501648382299 951.54906993586 30.219 2 -0.6027177487604056 0.178582707004358 0.9994892121806103 ['ENSG00000061938|ENST00000672887|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'TNK2|p.D734*|1|0.32|ENSG00000061938|chr3:195868054-195868055|-/C|frameshift_variant'] 70686 5097 LWKSWDSYYSK True NCI_RA007_Epitope_Rep2 1461.69286589029 1461.69121490379 24.45 3 -0.6028536412660181 0.1786430454897131 0.9995474027912847 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 65378 9628 LREDLELYYK True NCI_RA007_Epitope_Rep1 1340.6976169175598 1340.69596490379 41.449 3 -0.602901416598535 0.17865601414721952 0.9995678304568549 ['nc|ENSG00000122432|Q5VX52|SPATA1', 'ENSG00000122432|ENST00000699524|SPATA1'] 59711 14246 LGAYLPRRNR True PC9_epitope_Rep3 1214.6996230365799 1214.69797490379 59.884 3 -0.6030453013547976 0.17874792768611353 0.9996292566795739 ['ENST00000369776.8_1_X:153640293-153648389:+|nuORF'] 91570 23819 RIKAITTC True NCI_RA007_Epitope_Rep3 904.5164221818001 904.51587496793 103.22 1 -0.6031193599212181 0.17878682623385644 0.9996608169021497 ['ENSG00000187105|ENST00000553558|HEATR4'] 13697 6962 DPSSSSHITL True PC9_epitope_Rep3 1042.4931034545803 1042.49200993586 31.791 2 -0.6031617109510151 0.17878682623385644 0.999678847592722 ['ENST00000513237.5_1_4:106194042-106196375:+|nuORF'] 142024 14719 YVLFYFLNC True NCI_RA007_Epitope_Rep3 1180.56270366788 1180.5616099358601 65.301 2 -0.6032023807897577 0.17878682623385644 0.9996961506433003 ['ENST00000560776.1_1_15:59961053-59961500:-|nuORF'] 66391 10003 LSGISLAVN True H1975_Epitope_Rep1 872.49673228304 872.49618496793 43.412 1 -0.6032173707500257 0.1787997915975939 0.999702525204486 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000589793.1_1_17:76539878-76567391:-|nuORF', 'nc|ENSG00000187775|Q9UFH2-4|DNAH17'] 59395 21686 LFLLQPTV True PC9_epitope_Rep4 929.55860426361 929.55750993586 91.617 2 -0.6032769118432293 0.1788127565519419 0.9997278296875345 ['NXPH1|p.E80*|1|0.04|ENSG00000122584|chr7:8751189-8751190|-/AT|frameshift_variant', 'NXPH1|p.P79Qfs*7|1|0.05|ENSG00000122584|chr7:8751188-8751189|-/AATG|frameshift_variant', 'ENSG00000122584|ENST00000405863|NXPH1'] 137078 20824 YAPYELHGPHA True PC9_epitope_Rep3 1253.5829215184901 1253.58182993586 85.371 2 -0.6032860006569729 0.17882007483068374 0.9997316901510974 ['ENSG00000249693|ENST00000512175|THEGL'] 16813 13199 EEVVEIEYV True PC9_epitope_Rep1 1107.53357128423 1107.53246993586 55.634 2 -0.6032918831100399 0.17882007483068374 0.9997341884041894 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 19769 16581 ELSDQYKQEKL True H1975_Epitope_Rep3 1379.6932598131095 1379.6921699358602 69.277 2 -0.603298181167393 0.17882007483068374 0.9997368628904956 ['ENSG00000117724|ENST00000366955|CENPF'] 31501 13277 GEDCREAV True NCI_RA007_Epitope_Rep4 877.35998111005 877.35888993586 58.205 2 -0.6033633938817079 0.17888039909067946 0.9997645390659093 ['ENST00000513286.1_1_4:54441909-54442551:+|nuORF', 'ENSG00000170619|ENST00000305103|COMMD5'] 28357 19776 FRVALRPRP True PC9_epitope_Rep1 1110.6774310400199 1110.6763299358602 80.892 2 -0.6033876673287474 0.17890632399835824 0.9997748329453311 ['ENSG00000125731|ENST00000245908|SH2D3A', 'ENST00000595681.5_1_19:6754625-6763810:-|nuORF', 'ENST00000595369.1_1_19:6759548-6763810:-|nuORF'] 63917 20125 LNQNWDVK True PC9_epitope_Rep1 1015.5086939490699 1015.50758993586 82.241 2 -0.6033977739444191 0.17890632399835824 0.9997791177175419 ['ENST00000593477.1_1_19:41312411-41313222:+|nuORF', 'nc|ENSG00000269858|Q96KS0-2|EGLN2', 'ENSG00000269858|ENST00000303961|EGLN2'] 64631 25178 LPTGSCFSPI True PC9_epitope_Rep1 1020.49501803088 1020.49392993586 101.73 2 -0.603456644481671 0.17893507190553617 0.9998040617886206 ['ENST00000472558.6_1_12:6657995-6658223:-|nuORF'] 83197 6254 PSTPLDQGIR True PC9_epitope_Rep3 1082.57202248162 1082.57092993586 29.093 2 -0.6034946499389803 0.1789767794282467 0.9998201519143263 ['ENST00000563594.5_1_16:90032383-90032806:+|nuORF'] 98450 17000 SFFYAQYCYL True H1975_Epitope_Rep3 1303.55834656343 1303.55724993586 70.984 2 -0.6035000439231227 0.1789767794282467 0.9998224346902929 ['nc|ENSG00000196460|Q6ZV50|RFX8'] 58654 13720 LERGFIYV True PC9_epitope_Rep5 995.5440168286299 995.54290993586 57.8 2 -0.6035199073662374 0.17898973954222572 0.9998308392503139 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 19213 12797 ELILSSNKITY True H1975_Epitope_Rep3 1279.70236794483 1279.7012699358602 54.44 2 -0.6035530188481996 0.17900269924705214 0.9998448429681516 ['LRRTM4|p.L308Ffs*30|1|0.25|ENSG00000176204|chr2:77518945-77518945|C/-|frameshift_variant', 'nc|ENSG00000176204|Q86VH4-2|LRRTM4', 'LRRTM4|p.K489Nfs*34|1|0.42|ENSG00000176204|chr2:77518402-77518402|C/-|frameshift_variant', 'ENSG00000176204|ENST00000409884|LRRTM4'] 19768 16599 ELSDQYKQEKL True H1975_Epitope_Rep1 1379.6932598131095 1379.6921699358602 69.225 2 -0.6035702955078414 0.17902861742932458 0.9998521465853334 ['ENSG00000117724|ENST00000366955|CENPF'] 67279 11532 LSRRYEGEI True PC9_epitope_Rep2 1121.58292151849 1121.58182993586 49.685 2 -0.6035957556621151 0.17902861742932458 0.9998629058046977 ['nc|ENSG00000145996|Q5VV42-2|CDKAL1'] 121778 6993 VFNSPGHSL True PC9_epitope_Rep4 956.4715801643599 956.47048993586 34.145 2 -0.6036303665521628 0.17905736022981975 0.9998775245222628 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2'] 119444 14545 VAQYADTL True PC9_epitope_Rep2 879.4337976733099 879.43270993586 61.22 2 -0.6036466450576464 0.17907031804908846 0.9998843971299419 ['COL6A3|p.V493L|1|0.28|ENSG00000163359|chr2:237381335-237381335|C/A|missense_variant'] 41747 6047 IANPLLAVP True NCI_RA007_Epitope_Rep1 906.5538532363399 906.55274993586 27.563 2 -0.603701737720889 0.1790832754593093 0.9999076423860891 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 129855 22185 VRRRRGRH True PC9_epitope_Rep4 1091.6649092937098 1091.6638099358602 93.581 2 -0.6037615408411517 0.17911201603611282 0.9999328501308766 ['ENST00000370282.7_1_1:93645835-93645964:-|nuORF'] 87078 9203 QNKSIQSL True PC9_epitope_Rep1 916.4977949121999 916.49668993586 40.249 2 -0.6038146133455355 0.17914075570567253 0.9999551989736617 ['ENSG00000169683|ENST00000306688|LRRC45'] 135569 18856 WKWFKHIIRFI True NCI_RA007_Epitope_Rep4 1572.9081592508398 1572.90652490379 81.554 3 -0.6038728614482742 0.17916949446803138 0.9999797035142968 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 64353 9812 LPLIVKHIRK True NCI_RA007_Epitope_Rep5 1215.8179472641098 1215.81631490379 44.387 3 -0.60388164505611 0.1791824494949495 0.9999833965508514 ['ENSG00000179213|ENST00000601727|SIGLECL1'] 49256 3919 KEQEWDPQK True H1975_Epitope_Rep2 1186.5618517207397 1186.56019490379 20.123 3 -0.6039330822860357 0.17919257599191946 1.0 ['CAPN6|p.R283Gfs*11|1|0.19|ENSG00000077274|chrX:111251586-111251596|AGGGGTTTCTC/-|frameshift_variant', 'ENSG00000077274|ENST00000324068|CAPN6'] 52350 24531 KKKKRKWLRQE True NCI_RA007_Epitope_Rep5 1526.9521493211398 1526.95104993586 101.83 2 -0.6039337933319329 0.17919257599191946 1.0 ['ENSG00000187862|ENST00000368236|TTC24'] 56166 20226 LAVSLSLLLL True PC9_epitope_Rep4 1040.6845330527199 1040.6834299358602 85.939 2 -0.6039731801800081 0.17919987374733687 1.0 ['SLC39A1|p.R228L|1|0.15|ENSG00000143570|chr1:153960390-153960390|C/A|missense_variant'] 105728 7758 SSFIHSVSI True PC9_epitope_Rep5 975.50254593947 975.50144993586 34.782 2 -0.6039897291516921 0.17919987374733687 1.0 ['ENST00000356978.8_1_14:90871105-90871177:+|nuORF'] 90376 23663 REHLNYWYS True NCI_RA007_Epitope_Rep3 1266.57817049122 1266.57652490379 102.61 3 -0.6039927121073275 0.17919987374733687 1.0 ['nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'ENST00000496783.1_1_21:43708308-43714771:+|nuORF', 'ENST00000472587.5_1_21:43696971-43716499:+|nuORF', 'nc|ENSG00000160179|P45844-8|ABCG1', 'nc|ENSG00000172350|Q9H172-4|ABCG4', 'nc|ENSG00000172350|Q9H172-3|ABCG4', 'nc|ENSG00000172350|Q9H172-2|ABCG4', 'ENSG00000172350|ENST00000619701|ABCG4'] 12682 5799 DLDRQEWERQK True H1975_Epitope_Rep1 1501.72735390605 1501.72570490379 27.379 3 -0.604008965752907 0.17920151491241912 1.0 ['MTCL1|p.R1295L|1|0.63|ENSG00000168502|chr18:8819030-8819030|G/T|missense_variant'] 84190 23085 PYLALLTIP True PC9_epitope_Rep3 999.60046907559 999.59936993586 94.064 2 -0.6040226835885856 0.17920151491241912 1.0 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17', 'nc|ENSG00000152942|O75943-4|RAD17', 'nc|ENSG00000152942|O75943-3|RAD17'] 86605 13042 QLEIFHLVMYR True NCI_RA007_Epitope_Rep2 1447.7645913619099 1447.7634899358602 55.357 2 -0.6040242235249383 0.17920151491241912 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 54287 7071 KWWRCFPERWF True H1975_Epitope_Rep1 1639.7870581419895 1639.78540490379 32.225 3 -0.60402559998525 0.17920151491241912 1.0 ['nc|nan|Q6UWU4-3|C6orf89', 'ENSG00000198663|ENST00000480824|C6orf89', 'nc|nan|Q6UWU4-2|C6orf89'] 26731 10013 FIYRCLHPLY True H1975_Epitope_Rep3 1323.67979910879 1323.67816490379 43.553 3 -0.6040356573802776 0.17920151491241912 1.0 ['ENST00000389879.9_1_14:99977546-99977624:+|nuORF'] 100530 13053 SLAVAISQTL True PC9_epitope_Rep5 1001.5757108797301 1001.5746099358599 55.214 2 -0.6043185586476112 0.1792589787287761 1.0 ['ENSG00000181240|ENST00000321510|SLC25A41'] 63210 8625 LLSCVCHTL True PC9_epitope_Rep1 987.4881588286299 987.48706993586 38.014 2 -0.6043411272094458 0.1792589787287761 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC', 'MUC5AC|p.Q326Pfs*7|1|0.11|ENSG00000215182|chr11:1164288-1164289|-/C|frameshift_variant'] 29936 22229 FVYNLLTF True PC9_epitope_Rep4 1015.5378688190299 1015.53676993586 93.742 2 -0.604357274823406 0.17926910089311074 1.0 ['ATP8A2|p.G360V|1|0.64|ENSG00000132932|chr13:25553814-25553814|G/T|missense_variant'] 129983 25103 VRVSSIGV True PC9_epitope_Rep1 815.4865019525099 815.4859549679301 101.44 1 -0.6043659655566016 0.17926910089311074 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant'] 70189 11351 LVQAVLGGSL True PC9_epitope_Rep1 955.5702315764698 955.56912993586 48.54 2 -0.6043787388952746 0.17928205128205127 1.0 ['ENSG00000131584|ENST00000354700|ACAP3', 'nc|ENSG00000131584|Q96P50-4|ACAP3', 'ENST00000467278.5_1_1:1228946-1234134:-|nuORF', 'nc|ENSG00000131584|Q96P50-1|ACAP3'] 133399 24454 VVVLLVLLCC True PC9_epitope_Rep1 1072.6388458136 1072.63774993586 98.906 2 -0.6043973746628004 0.17929217223914037 1.0 ['ENSG00000147408|ENST00000692225|CSGALNACT1', 'nc|ENSG00000147408|Q8TDX6-3|CSGALNACT1'] 56678 20134 LDKKYAGLL True PC9_epitope_Rep3 1019.6015317047498 1019.60042993586 82.699 2 -0.6044463185530001 0.17929217223914037 1.0 ['ENSG00000007168|ENST00000397195|PAFAH1B1'] 85649 11013 QGLTANSL True PC9_epitope_Rep1 802.41848196234 802.41738993586 47.25 2 -0.6045633440498437 0.17936257494477753 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 39031 10618 HHRVTVLQAT True PC9_epitope_Rep6 1160.64143945412 1160.64034993586 51.66 2 -0.6045695688356042 0.17936257494477753 1.0 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF', 'nc|ENSG00000157426|Q4L235-3|AASDH', 'nc|ENSG00000157426|Q4L235-4|AASDH', 'nc|ENSG00000157426|Q4L235-2|AASDH', 'ENSG00000157426|ENST00000205214|AASDH', 'ENST00000514745.5_1_4:57219701-57248665:-|nuORF'] 80891 8517 PHVVTVTMNGV True NCI_RA007_Epitope_Rep4 1152.5961290544801 1152.59449490379 39.554 3 -0.6046560648536997 0.17936257494477753 1.0 ['ENSG00000204217|ENST00000374580|BMPR2'] 136748 23804 WYKVILSILVP True PC9_epitope_Rep3 1329.80604516773 1329.8049499358601 96.849 2 -0.6046725151176419 0.1793726925625572 1.0 ['ENSG00000092439|ENST00000646667|TRPM7'] 44139 21990 IIRYYRHYKVK True PC9_epitope_Rep6 1537.8881520822504 1537.88650490379 97.506 3 -0.6046759964800549 0.1793726925625572 1.0 ['MYO1D|p.R733H|1|0.14|ENSG00000176658|chr17:32659262-32659262|C/T|missense_variant'] 41731 20069 IALRYQLL True PC9_epitope_Rep4 988.6069514383598 988.60584993586 85.333 2 -0.6047310908731987 0.17940141678368016 1.0 ['ELP4|p.W162L|1|0.24|ENSG00000109911|chr11:31594873-31594873|G/T|missense_variant'] 36453 10442 GVGEGAFK True H1975_Epitope_Rep3 763.38645355807 763.3859049679301 45.225 1 -0.6048079489442241 0.17946169380285246 1.0 ['ENST00000399138.4_1_17:18112786-18112837:+|nuORF'] 98530 14900 SFMVDRVVDL True PC9_epitope_Rep5 1179.5957947013098 1179.59413490379 62.316 3 -0.6049020033566724 0.17947180765468715 1.0 ['ENST00000487921.5_1_17:56769962-56783250:+|nuORF', 'ENST00000475762.5_1_17:56772326-56801433:+|nuORF', 'ENSG00000108384|ENST00000337432|RAD51C'] 39409 25245 HKRYKIQKKVR True PC9_epitope_Rep1 1482.9259345732999 1482.92482993586 101.99 2 -0.6049095633263619 0.17947180765468715 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 96775 16847 SAPPVILEQRR True NCI_RA007_Epitope_Rep4 1264.72516907808 1264.7240699358601 72.999 2 -0.6049345026530366 0.17949769672493215 1.0 ['IGSF10|p.A1839S|1|0.71|ENSG00000152580|chr3:151443432-151443432|C/A|missense_variant'] 119917 14262 VDLGSRLTPED True PC9_epitope_Rep5 1200.59863115228 1200.5975299358602 59.863 2 -0.6049470660219949 0.17949769672493215 1.0 ['ENST00000575556.1_1_16:67970119-67970555:-|nuORF'] 66349 4891 LSGDPQNLSD True PC9_epitope_Rep4 1044.47236801 1044.4712699358602 25.406 2 -0.6050062154080098 0.1795365272672777 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF'] 89129 2617 QVQTILMPQP True NCI_RA007_Epitope_Rep3 1153.6165301458898 1153.6154299358602 14.756 2 -0.6050305294721757 0.1795365272672777 1.0 ['ENST00000572974.1_1_16:4475882-4481706:+|nuORF'] 99808 15299 SIKNKHLI True PC9_epitope_Rep2 951.5865503469499 951.58544993586 64.129 2 -0.6050407172061923 0.1795365272672777 1.0 ['nc|ENSG00000146038|Q9UHG0-2|DCDC2'] 59239 18895 LFFAWIKIFK True NCI_RA007_Epitope_Rep3 1311.7743511166298 1311.7726949037901 82.613 3 -0.6050981788014299 0.17958101968702675 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 130941 14588 VTDIYWHSN True H1975_Epitope_Rep1 1133.51417325233 1133.5130699358601 61.32 2 -0.6051125660027274 0.17959396147839668 1.0 ['MIS18BP1|p.N410D|1|0.11|ENSG00000129534|chr14:45235934-45235934|T/C|missense_variant'] 19863 9342 ELTEHLRLH True PC9_epitope_Rep5 1146.61455599994 1146.6129149037902 40.887 3 -0.6051601916257487 0.17965422595198283 1.0 ['ENSG00000204947|ENST00000378061|ZNF425'] 92153 7011 RLEKKSFEKAP True NCI_RA007_Epitope_Rep2 1331.75613485319 1331.7544949037901 31.894 3 -0.6051720794077509 0.17966433213451952 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1'] 94766 5494 RSLDKEMKTW True NCI_RA007_Epitope_Rep2 1292.65470655976 1292.65306490379 25.988 3 -0.605193087199872 0.17966433213451952 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 19883 12491 ELTKKHWDL True PC9_epitope_Rep5 1168.62405805448 1168.62296993586 53.045 2 -0.6052208308952698 0.17967727179519535 1.0 ['ENSG00000214946|ENST00000437605|TBC1D26'] 29816 15612 FVQTPPVIS True PC9_epitope_Rep1 986.5436824754598 986.54258993586 64.871 2 -0.605492330901758 0.1797921168435829 1.0 ['ENSG00000171316|ENST00000423902|CHD7'] 3558 14671 AGLVGCLLE True NCI_RA007_Epitope_Rep3 873.46298962661 873.4624449679301 65.086 1 -0.6055036502557586 0.1797921168435829 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 126805 15792 VLPRNLAL True PC9_epitope_Rep2 894.5650866263799 894.56398993586 66.008 2 -0.605559091808843 0.1797921168435829 1.0 ['ENSG00000188676|ENST00000502986|IDO2', 'IDO2|p.G381Afs*8|1|0.19|ENSG00000188676|chr8:40015517-40015517|G/-|frameshift_variant', 'nc|ENSG00000188676|Q6ZQW0-2|IDO2'] 112452 10621 TLDEKHLLLK True H1975_Epitope_Rep1 1208.71287305888 1208.71176993586 45.81 2 -0.6055928361856125 0.1797921168435829 1.0 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 13573 18803 DPEDLCTFAYI True H1975_Epitope_Rep3 1285.5536551058099 1285.55254993586 78.863 2 -0.6056889289419144 0.17984953393372555 1.0 ['ENSG00000064999|ENST00000360359|ANKS1A'] 79019 20475 PALATALAL True PC9_epitope_Rep1 839.5116540711899 839.51054993586 83.569 2 -0.6057066731112873 0.17984953393372555 1.0 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 44210 8980 IKEIEYRIIKT True NCI_RA007_Epitope_Rep2 1404.8340508207198 1404.8329499358601 39.54 2 -0.6057393029083431 0.1798624692448426 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 117055 9209 TVIEALQAPP True H1975_Epitope_Rep2 1037.5757108797297 1037.57460993586 40.376 2 -0.6058267418817168 0.17989117577478117 1.0 ['nc|ENSG00000157873|Q92956-2|TNFRSF14', 'ENST00000463835.5_1_1:2492021-2494709:+|nuORF', 'ENST00000475523.5_1_1:2490981-2494709:+|nuORF', 'ENSG00000157873|ENST00000355716|TNFRSF14', 'ENST00000463471.6_1_1:2494574-2494709:+|nuORF', 'ENST00000480305.1_1_1:2493254-2494709:+|nuORF'] 116645 6577 TVARSPVAP True PC9_epitope_Rep5 896.5079656730799 896.50686993586 30.269 2 -0.6058775033251306 0.1799012727301402 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 83991 8128 PVSPVAPR True PC9_epitope_Rep1 821.47593726881 821.47484993586 36.093 2 -0.6058891918126171 0.1799012727301402 1.0 ['ENST00000446816.1_1_2:96874348-96906424:+|nuORF'] 58116 4683 LEKKAQKYK True NCI_RA007_Epitope_Rep5 1134.6760936273397 1134.6744449037901 24.698 3 -0.6059178692806345 0.1799056945955749 1.0 ['DAB1|p.D177Y|1|0.25|ENSG00000173406|chr1:57071551-57071551|C/A|missense_variant'] 62881 11291 LLNGVSIK True PC9_epitope_Rep6 842.52255310806 842.52144993586 54.445 2 -0.6059372513278977 0.1799056945955749 1.0 ['ENST00000575209.5_1_17:5386088-5389490:-|nuORF'] 20301 6354 ENTKASEEEED True NCI_RA007_Epitope_Rep1 1279.5051842599098 1279.50408993586 28.743 2 -0.605938578236504 0.1799056945955749 1.0 ['PHRF1|p.S867Pfs*46|1|0.14|ENSG00000070047|chr11:608054-608064|CAGCCCGAAGG/-|frameshift_variant', 'PHRF1|p.C227Lfs*15|1|0.07|ENSG00000070047|chr11:596982-596991|GCCCGGAATG/-|frameshift_variant', 'nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 100594 16855 SLCRISSVP True PC9_epitope_Rep2 960.50625142092 960.50514993586 70.081 2 -0.6059516084071618 0.1799056945955749 1.0 ['BSN|p.G2876Dfs*18|1|0.14|ENSG00000164061|chr3:49658178-49658178|G/-|frameshift_variant', 'BSN|p.G3480Afs*7|1|0.72|ENSG00000164061|chr3:49662282-49662282|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 13069 7903 DLPLSQDPAP True NCI_RA007_Epitope_Rep1 1051.51858992643 1051.51748993586 34.734 2 -0.6059710106898021 0.1799186273891377 1.0 ['ENST00000572418.1_1_17:3806502-3807261:-|nuORF'] 28692 7345 FSQRDRCH True H1975_Epitope_Rep2 1047.46684622043 1047.46574993586 33.193 2 -0.6060083103943895 0.17993155977480957 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3'] 124196 6670 VGTAQGHIF True PC9_epitope_Rep1 928.4766655447999 928.47556993586 30.46 2 -0.6060850581695988 0.18000189226693578 1.0 ['ENSG00000104142|ENST00000220509|VPS18', 'VPS18|p.D357Gfs*27|1|0.25|ENSG00000104142|chr15:40899884-40899885|-/G|frameshift_variant'] 792 10746 AAWFKNMPHLK True PC9_epitope_Rep4 1341.7015971825297 1341.6999449037899 49.09 3 -0.6060904283357119 0.18000189226693578 1.0 ['TLR8|p.T750Nfs*8|1|0.13|ENSG00000101916|chrX:12921283-12921284|-/A|frameshift_variant', 'ENSG00000101916|ENST00000218032|TLR8', 'nc|ENSG00000101916|Q9NR97-2|TLR8'] 120406 11338 VEEMYEAHA True H1975_Epitope_Rep3 1077.44371073401 1077.4426099358602 48.722 2 -0.6060938343943413 0.18000189226693578 1.0 ['PARP9|p.L655Afs*19|1|0.03|ENSG00000138496|chr3:122536982-122536983|-/GTTGGCTTTCAAAGAATGTACTCGACACCTTGCG|frameshift_variant', 'nc|ENSG00000138496|Q8IXQ6-3|PARP9', 'PARP9|p.Q816Mfs*23|1|0.05|ENSG00000138496|chr3:122528484-122528485|-/CCATC|frameshift_variant', 'ENSG00000138496|ENST00000682323|PARP9', 'nc|ENSG00000138496|Q8IXQ6|PARP9', 'ENST00000489652.1_1_3:122255723-122264321:-|nuORF'] 129523 1891 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 10.479 3 -0.6062037791884206 0.18002207505518764 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 137697 23759 YEKKPKKQKRR True PC9_epitope_Rep3 1487.9048647755496 1487.90320490379 96.673 3 -0.6062080148542432 0.18002207505518764 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 84087 18310 PWLAECTPI True H1975_Epitope_Rep2 1028.50010341132 1028.4990099358602 75.929 2 -0.606212584067742 0.18002207505518764 1.0 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'nc|ENSG00000070961|P20020-5|ATP2B1', 'nc|ENSG00000070961|P20020-2|ATP2B1', 'ATP2B1|p.D756Efs*18|1|0.19|ENSG00000070961|chr12:89610467-89610488|TCGAAGTTTTGGCCAAATCTTG/-|frameshift_variant'] 52352 25169 KKKKRKWLRQE True PC9_epitope_Rep5 1526.9521493211398 1526.95104993586 101.96 2 -0.6062132177980465 0.18002207505518764 1.0 ['ENSG00000187862|ENST00000368236|TTC24'] 98400 8116 SFDSYFCVTKP True NCI_RA007_Epitope_Rep2 1292.5747249035599 1292.57362993586 36.201 2 -0.6062185914146858 0.18002932690033585 1.0 ['CHRM2|p.R121S|1|0.18|ENSG00000181072|chr7:137015228-137015228|G/T|missense_variant'] 33828 12380 GLNGTKPVP True PC9_epitope_Rep1 881.4970666362099 881.49596993586 52.479 2 -0.6062324762127955 0.18002932690033585 1.0 ['nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1'] 102203 6935 SLSAGPAVAA True NCI_RA007_Epitope_Rep5 842.4497820906199 842.44868993586 33.36 2 -0.6062346004198679 0.18002932690033585 1.0 ['ENST00000315872.10_1_2:11484261-11484312:-|nuORF'] 131892 6339 VTRLEQSL True NCI_RA007_Epitope_Rep3 944.5290950404799 944.52798993586 31.94 2 -0.606263596775372 0.18004225529767912 1.0 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB', 'ENST00000571632.5_1_17:7838298-7849136:+|nuORF'] 7367 17341 ARRTKLTA True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 73.477 2 -0.6063163788557415 0.18006811086935956 1.0 942 10893 ADQTAVQLP True PC9_epitope_Rep2 941.4818104948899 941.48070993586 47.216 2 -0.6063202149755247 0.18006811086935956 1.0 ['ENSG00000138780|ENST00000515279|GSTCD', 'nc|ENSG00000138780|Q8NEC7-3|GSTCD'] 27362 6706 FLSTSVQSP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 30.706 2 -0.6063449169450601 0.1800781989026928 1.0 ['DMD|p.G3059S|1|0.25|ENSG00000198947|chrX:31323647-31323647|C/T|missense_variant'] 83624 16211 PVDNLVIK True PC9_epitope_Rep1 896.53311779176 896.53256496793 67.172 1 -0.6063658535516879 0.1800781989026928 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 82390 19065 PPLPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 78.124 2 -0.6063924717027614 0.18009112551041323 1.0 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 36876 18536 GVLLRRYSR True NCI_RA007_Epitope_Rep4 1118.66726027914 1118.66667496793 80.21 1 -0.606495882429443 0.1801270632005423 1.0 ['GPX1|p.P175L|1|0.2|ENSG00000233276|chr3:49357476-49357476|G/A|missense_variant'] 114346 15161 TPRSVFRAVY True PC9_epitope_Rep5 1194.6509415086598 1194.6493049037902 63.323 3 -0.6064990687264658 0.1801270632005423 1.0 ['nc|ENSG00000186919|Q401N2-2|ZACN'] 135610 15710 WLIIKCKP True NCI_RA007_Epitope_Rep3 999.59394422651 999.59284993586 69.435 2 -0.6065112045253449 0.1801270632005423 1.0 ['SLC22A11|p.G287C|1|0.19|ENSG00000168065|chr11:64564345-64564345|G/T|missense_variant'] 34597 13128 GPVASSGEF True PC9_epitope_Rep2 849.38684748089 849.38574993586 55.77 2 -0.6065228652926254 0.1801270632005423 1.0 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENST00000530302.1_1_5:157218668-157230721:-|nuORF'] 131361 6939 VTGTFYLSP True NCI_RA007_Epitope_Rep2 983.49639792987 983.49530993586 31.612 2 -0.6065874189039454 0.18013714826200047 1.0 ['ENST00000277795.8_1_10:70048210-70048411:-|nuORF'] 103155 10394 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.57657496793 47.682 1 -0.6066112780983494 0.18013714826200047 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 63329 9686 LLTEIRNEKF True PC9_epitope_Rep2 1261.7030366511697 1261.70140490379 42.597 3 -0.6067400390625464 0.1801816003531118 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 78768 10270 PAALAEEES True PC9_epitope_Rep2 915.4185415319901 915.41744993586 44.836 2 -0.6067522834698491 0.18018884282539133 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 84777 9307 QDVEKELRDGG True PC9_epitope_Rep4 1244.5996937814398 1244.5985899358602 43.406 2 -0.6068047158498081 0.18018884282539133 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 78825 23106 PADLLLFLI True PC9_epitope_Rep4 1013.61611913973 1013.61502993586 97.096 2 -0.6068091796344169 0.18018884282539133 1.0 ['ENST00000455309.1_1_2:112249080-112249152:+|nuORF'] 35081 16903 GQVLHVVQAL True PC9_epitope_Rep5 1062.61857875122 1062.61748993586 70.032 2 -0.6068232346635722 0.18020176544766708 1.0 ['ENST00000482071.1_1_3:136664576-136665812:+|nuORF', 'NCK1-IL20RB|2|fusion', 'nc|ENSG00000158092|P16333-2|NCK1', 'NCK1-IL20RB|3|fusion', 'ENSG00000158092|ENST00000481752|NCK1'] 44256 15506 IKTRDAVL True PC9_epitope_Rep5 914.5549158654999 914.55436496793 64.653 1 -0.6068736632871472 0.18020332571518638 1.0 ['ENSG00000141437|ENST00000269205|SLC25A52'] 5022 13154 ALIFTHRRL True NCI_RA007_Epitope_Rep5 1125.6770966868498 1125.6759899358601 57.275 2 -0.6068829645427637 0.18020332571518638 1.0 ['ENSG00000232382|ENST00000642057|OR5K1'] 64208 14118 LPGLVQIAA True PC9_epitope_Rep5 880.5382031721999 880.53710993586 59.316 2 -0.6069036228183805 0.18020332571518638 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA'] 31377 5642 GDSSQSLFVDR True NCI_RA007_Epitope_Rep1 1209.56257999673 1209.5614899358602 26.006 2 -0.6069079618181543 0.18020332571518638 1.0 ['ENST00000472792.1_1_6:43027707-43029170:+|nuORF'] 129325 19588 VQYIQDII True NCI_RA007_Epitope_Rep2 990.5385970950199 990.53750993586 81.134 2 -0.6069114486106839 0.18020332571518638 1.0 ['nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B'] 129524 2073 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 11.494 3 -0.6069490061062973 0.18023200832203765 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 109848 11930 TEELRISIY True H1975_Epitope_Rep3 1122.5920892198599 1122.59098993586 51.044 2 -0.6069639725167754 0.1802420880090783 1.0 ['ENST00000259486.10_1_8:120596034-120598489:-|nuORF'] 58879 3752 LETAGVAR True H1975_Epitope_Rep1 815.45011644379 815.44900993586 18.966 2 -0.6070389096658727 0.1802420880090783 1.0 ['ENST00000473515.5_1_6:108067761-108070999:-|nuORF'] 128161 11046 VPLPTELL True NCI_RA007_Epitope_Rep2 880.52696978216 880.52586993586 47.564 2 -0.6070583651514375 0.18027076864883607 1.0 ['ENSG00000145217|ENST00000398516|SLC26A1'] 34964 22494 GQRLPVEDFSL True PC9_epitope_Rep5 1259.6510010783097 1259.64990993586 91.526 2 -0.6070773667585881 0.18028084663756283 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 114426 10143 TPTTPPAVAP True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 44.014 2 -0.6071161322843538 0.18028084663756283 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 129525 2134 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 11.835 3 -0.6071587496741249 0.1803095253104709 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 122157 15369 VGAGLGASL True PC9_epitope_Rep5 743.41775368635 743.41720496793 64.126 1 -0.6071995980990499 0.18036687994452674 1.0 ['ENST00000356384.4_1_9:137329758-137329917:+|nuORF'] 29189 6582 FTRITDRALYW True H1975_Epitope_Rep1 1440.75138382592 1440.74974490379 30.378 3 -0.6072308690406106 0.18036687994452674 1.0 ['nc|ENSG00000259024|Q96ET8|TVP23C'] 66452 11400 LSGRQERK True PC9_epitope_Rep4 972.5464764401199 972.54536993586 51.62 2 -0.6072503741662502 0.1803797967063273 1.0 ['NBN|p.S537Vfs*9|1|0.31|ENSG00000104320|chr8:89953481-89953481|G/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 128903 22794 VQFVPPLPEWK True PC9_epitope_Rep4 1338.7336085034597 1338.73195490379 95.898 3 -0.6072947739305496 0.18039271306101867 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 88850 12518 QVAVGVAVL True NCI_RA007_Epitope_Rep3 854.5225531080599 854.52144993586 56.47 2 -0.6073386864224319 0.18041854454915063 1.0 ['ENST00000463639.1_1_6:32946038-32946125:+|nuORF'] 101059 15275 SLGERINTL True PC9_epitope_Rep3 1001.55055876105 1001.54946993586 63.907 2 -0.6073695948694183 0.18041854454915063 1.0 ['ENSG00000171303|ENST00000302909|KCNK3'] 47268 6652 IVDEKVRRRE True NCI_RA007_Epitope_Rep1 1298.74188177138 1298.74024490379 29.887 3 -0.6074242901727902 0.18042577330959172 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 68526 6559 LTGGLNKC True PC9_epitope_Rep2 804.41637378736 804.41526993586 30.641 2 -0.6074413466111204 0.18042577330959172 1.0 ['ENST00000406202.2_1_6:157297523-157298164:+|nuORF'] 41199 9157 HVITKTSLP True PC9_epitope_Rep3 994.58113061334 994.58002993586 40.163 2 -0.607451708648222 0.18042577330959172 1.0 ['KIF17|p.P898H|1|0.19|ENSG00000117245|chr1:20671967-20671967|G/T|missense_variant'] 66029 10510 LSEEPQLQP True H1975_Epitope_Rep1 1039.51858992643 1039.51748993586 45.379 2 -0.6074930450066047 0.1804330013866129 1.0 ['OR7A17|p.E22Q|1|0.17|ENSG00000185385|chr19:14881292-14881292|C/G|missense_variant'] 24772 5054 FASKIRYLQEY True H1975_Epitope_Rep3 1416.74015043588 1416.73849490379 24.562 3 -0.6075344480007568 0.1804330013866129 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'UNC79|p.D1264Gfs*29|1|0.2|ENSG00000133958|chr14:93612828-93612829|-/A|frameshift_variant', 'UNC79|p.G1658Afs*22|1|0.28|ENSG00000133958|chr14:93622205-93622205|G/-|frameshift_variant'] 46161 11444 ISLKCHQPV True PC9_epitope_Rep1 1023.5535359665099 1023.55242993586 48.897 2 -0.6075714662325692 0.1804330013866129 1.0 ['nc|ENSG00000229921|Q9Y6Z4-2|KIF25-AS1'] 83885 21904 PVPLGCRRCL True PC9_epitope_Rep5 1112.5946895858401 1112.59358993586 89.293 2 -0.6076320278357066 0.18044591507129915 1.0 ['ENST00000445698.1_3_3:45883482-45883542:-|nuORF'] 61752 9265 LLAFPRARAK True NCI_RA007_Epitope_Rep5 1141.7083968151298 1141.7072899358602 42.286 2 -0.6076553584774063 0.18046605429422238 1.0 ['GRIN3A|p.Q201Rfs*6|1|0.16|ENSG00000198785|chr9:101737379-101737379|G/-|frameshift_variant'] 13831 14696 DQLKQEFEFWY True H1975_Epitope_Rep1 1531.6983451935498 1531.69724993586 61.746 2 -0.6076692381233753 0.18046605429422238 1.0 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000514104.5_1_5:145522433-145523105:-|nuORF', 'ENST00000512412.1_1_5:145519224-145523084:-|nuORF'] 135570 19237 WKWFKHIIRFI True NCI_RA007_Epitope_Rep4 1572.9081592508398 1572.90652490379 83.173 3 -0.6076724805868665 0.18046605429422238 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 74391 16972 NESAVIVAP True PC9_epitope_Rep5 898.4759968384599 898.47544496793 70.302 1 -0.6076877161685136 0.18046605429422238 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 114208 18347 TPLQPPSEP True PC9_epitope_Rep1 964.48656152216 964.48546993586 75.361 2 -0.6077072845587813 0.18047612295378992 1.0 ['ENSG00000167566|ENST00000335999|NCKAP5L', 'nc|ENSG00000167566|Q9HCH0-2|NCKAP5L', 'NCKAP5L|p.I725Yfs*12|1|0.39|ENSG00000167566|chr12:49795688-49795688|C/-|frameshift_variant'] 60857 10558 LHVTGLAL True NCI_RA007_Epitope_Rep1 822.4963383602201 822.49524993586 45.052 2 -0.6077100309983865 0.18047612295378992 1.0 ['ENST00000414084.1_1_3:178785539-178789305:-|nuORF'] 129521 1524 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 8.4543 3 -0.6077515944684485 0.1805362994706327 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 88052 4427 QRQPQPFL True PC9_epitope_Rep4 1012.5454138109598 1012.54430993586 23.48 2 -0.6078057852204127 0.18056496463063035 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 44563 15725 ILPCKYCYL True H1975_Epitope_Rep3 1114.55551011246 1114.5544099358601 65.928 2 -0.6078482231822795 0.18058793874850337 1.0 ['ENST00000441890.5_1_1:154193404-154197599:+|nuORF'] 129522 1584 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 8.7889 3 -0.6078491299271122 0.18058793874850337 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 68616 9206 LTIALLFYGT True H1975_Epitope_Rep3 1110.63249747986 1110.6314099358601 40.404 2 -0.6078563160046591 0.18058793874850337 1.0 ['ENSG00000197887|ENST00000641683|OR1S2', 'nc|ENSG00000197887|Q8NGQ3|OR1S2'] 106519 10357 STLPKSLSL True PC9_epitope_Rep2 944.55424715916 944.55314993586 45.164 2 -0.6079589145569557 0.18061375594694226 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 99704 6883 SIHHNLSL True PC9_epitope_Rep4 919.48756458167 919.48646993586 33.696 2 -0.6079725925562561 0.18061375594694226 1.0 ['FOXG1|p.R230H|1|0.38|ENSG00000176165|chr14:28767968-28767968|G/A|missense_variant'] 74383 17051 NESAVIVAP True PC9_epitope_Rep1 898.4759968384599 898.47544496793 70.412 1 -0.6080773659880937 0.1806367259494967 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 17555 6376 EHGPENIVM-[Oxidation] True PC9_epitope_Rep2 1040.45969553176 1040.4585899358601 29.928 2 -0.6080777946546598 0.1806367259494967 1.0 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 46541 7973 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 37.356 2 -0.6080920406816165 0.1806367259494967 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 135708 20212 WLRRLRGVRG True NCI_RA007_Epitope_Rep2 1267.7737910363498 1267.7721449037901 83.652 3 -0.6080948759845463 0.18064963296682524 1.0 ['ENST00000447399.6_1_11:9685629-9715703:+|nuORF'] 49869 17844 KIEVLEQEL True PC9_epitope_Rep4 1099.61249031127 1099.6119749679299 76.672 1 -0.6081354870188365 0.18065115692976516 1.0 ['DSP|p.E1039Q|1|0.93|ENSG00000096696|chr6:7579305-7579305|G/C|missense_variant'] 27567 4492 FNGMMSLHKVK True NCI_RA007_Epitope_Rep2 1290.6576837652203 1290.6565899358602 22.105 2 -0.6081815677972303 0.18065115692976516 1.0 ['ENST00000502271.5_1_5:53181576-53181639:-|nuORF'] 28828 15922 FSWFWFRLYWF True NCI_RA007_Epitope_Rep2 1683.8026911227896 1683.8015899358602 66.651 2 -0.6081831449528892 0.18065115692976516 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 63862 13593 LNLRDHQLPFK True NCI_RA007_Epitope_Rep1 1379.7673682432298 1379.76626993586 56.886 2 -0.6082103057252152 0.18065115692976516 1.0 ['ENSG00000126814|ENST00000261249|TRMT5'] 16679 7024 EERERRHRQKH True H1975_Epitope_Rep1 1559.8141522781898 1559.81251490379 32.053 3 -0.6082191324851947 0.18065115692976516 1.0 ['ENSG00000188910|ENST00000373366|GJB3'] 74315 8984 NELHECNELG True H1975_Epitope_Rep2 1156.48188714788 1156.48078993586 39.511 2 -0.608243309269434 0.18067981350806453 1.0 ['ENST00000422060.2_1_7:5161504-5161795:-|nuORF', 'nc|ENSG00000235944|A8K554|ZNF815P'] 1536 14456 AEEPPTPALP True H1975_Epitope_Rep2 1020.5127762699999 1020.51166993586 60.761 2 -0.6082927269025276 0.18072137344463696 1.0 ['ENSG00000023902|ENST00000369124|PLEKHO1', 'nc|ENSG00000023902|Q53GL0-2|PLEKHO1'] 129299 19443 VQVRGRLQKP True H1975_Epitope_Rep2 1179.7200241279897 1179.7189299358602 80.694 2 -0.6083192835450641 0.18072137344463696 1.0 ['nc|ENSG00000145734|A6H8Y1-2|BDP1', 'ENST00000508917.6_1_5:70751704-70841064:+|nuORF', 'nc|ENSG00000145734|A6H8Y1-7|BDP1', 'nc|ENSG00000145734|A6H8Y1-6|BDP1', 'ENSG00000145734|ENST00000358731|BDP1', 'nc|ENSG00000145734|A6H8Y1-5|BDP1', 'ENST00000508157.3_1_5:70790975-70807035:+|nuORF', 'BDP1|p.I888Nfs*6|2|0.06|ENSG00000145734|chr5:71509753-71509754|-/A|frameshift_variant', 'nc|ENSG00000145734|A6H8Y1-4|BDP1', 'nc|ENSG00000145734|A6H8Y1-3|BDP1'] 130496 14242 VSPSRLALRV True PC9_epitope_Rep5 1096.67167695324 1096.6705699358602 59.787 2 -0.6083219284509274 0.18075002756296168 1.0 ['ENST00000367350.4_1_1:200587964-200589848:-|nuORF'] 67355 8733 LSSHHVVHK True NCI_RA007_Epitope_Rep1 1042.5672118846999 1042.5661099358601 37.972 2 -0.6083622952440304 0.18077868077868078 1.0 ['ENSG00000169071|ENST00000375708|ROR2'] 95572 10936 RWSRRTLYVQ True NCI_RA007_Epitope_Rep3 1363.74730150499 1363.7462099358602 50.101 2 -0.6083824800607343 0.18079158332414597 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 9243 16219 AVPEEGLAQV True PC9_epitope_Rep1 1011.5236753068697 1011.52256993586 67.205 2 -0.608387612235857 0.18080448546319336 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'nc|ENSG00000182095|O15417-4|TNRC18'] 96591 6967 SAGETPGWL True PC9_epitope_Rep4 916.4290466460399 916.4279499358599 34.038 2 -0.6084611012776789 0.18081453949855109 1.0 ['ENSG00000146409|ENST00000275227|SLC18B1'] 67170 12565 LSQWTLVI True PC9_epitope_Rep1 958.5487678558999 958.54766993586 53.2 2 -0.6084685515804215 0.18081453949855109 1.0 ['ENST00000330198.8_2_3:197770265-197770433:+|nuORF'] 113473 8037 TLSVEMDVW True H1975_Epitope_Rep3 1078.50049733414 1078.49940993586 35.888 2 -0.6086102531032195 0.18085893821755358 1.0 ['UNC13A|p.G777V|1|0.47|ENSG00000130477|chr19:17645700-17645700|C/A|missense_variant'] 65419 21269 LRFPWQLV True PC9_epitope_Rep3 1057.6072857915299 1057.6061899358601 87.104 2 -0.6086215680036354 0.18087183848310184 1.0 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 116209 8886 TTAATEII True PC9_epitope_Rep3 818.43854870058 818.43744993586 39.131 2 -0.6087186807224927 0.18096347973983842 1.0 ['ENSG00000120800|ENST00000261637|UTP20'] 13842 11878 DQLSKLKDER True NCI_RA007_Epitope_Rep2 1230.65681473474 1230.6557099358602 50.805 2 -0.6087339282324102 0.1809706780888791 1.0 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 100342 25249 SKNVRTILIEI True PC9_epitope_Rep2 1284.7765359446 1284.7759749679299 102.79 1 -0.6087412244994568 0.1809706780888791 1.0 ['ENST00000231498.7_1_5:37291884-37291974:-|nuORF'] 112599 9378 TLERRTLR True H1975_Epitope_Rep1 1043.61997573355 1043.6188699358602 40.982 2 -0.6087461297201924 0.1809706780888791 1.0 ['ENSG00000047644|ENST00000380861|WWC3'] 127457 13492 VNIWNPKRKLQ True H1975_Epitope_Rep1 1394.81465278882 1394.81354993586 57.016 2 -0.608763062796917 0.180975025981797 1.0 ['ENST00000592676.1_1_17:74731222-74731732:-|nuORF', 'ENST00000392485.2_1_17:74731675-74731732:-|nuORF'] 60385 22273 LGTLLGNLL True PC9_epitope_Rep4 912.56441792004 912.56332993586 93.912 2 -0.6087702449695895 0.180975025981797 1.0 ['OR4C16|p.L85*|1|0.36|ENSG00000279514|chr11:55572378-55572378|T/-|frameshift_variant', 'OR4C16|p.K86Rfs*11|1|0.21|ENSG00000279514|chr11:55572383-55572383|A/-|frameshift_variant', 'OR4C16|p.T116Rfs*16|1|0.15|ENSG00000279514|chr11:55572474-55572474|C/-|frameshift_variant', 'ENSG00000279514|ENST00000623907|OR4C16'] 55511 11330 LAGLSALPVS True PC9_epitope_Rep6 926.54368247546 926.54258993586 54.606 2 -0.6087894354452228 0.180975025981797 1.0 ['ENSG00000061455|ENST00000407847|PRDM6'] 99517 16477 SIDPEFYNSL True H1975_Epitope_Rep2 1183.5397192938299 1183.5386299358602 68.596 2 -0.6087960487098758 0.180975025981797 1.0 ['ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'nc|ENSG00000289720|Q96J02-3|ITCH', 'POFUT1-ITCH|1|fusion'] 80490 16829 PGLRVLVL True PC9_epitope_Rep4 865.5749230340899 865.57382993586 72.71 2 -0.6090185364761559 0.18103516147826224 1.0 ['ENST00000269397.8_2_17:77807391-77807700:-|nuORF'] 22033 7691 ESLDGCCLTPS True H1975_Epitope_Rep2 1123.45256116555 1123.4514699358601 34.535 2 -0.6090781469730746 0.18106380298545066 1.0 ['ENSG00000196427|ENST00000415641|NBPF4', 'ENSG00000186086|ENST00000495380|NBPF6', 'nc|ENSG00000186086|Q5VWK0-2|NBPF6'] 13041 10741 DLNSGNIDVP True PC9_epitope_Rep4 1042.49310345458 1042.49200993586 49.072 2 -0.6091155075323028 0.1810924435906722 1.0 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 137370 16713 YDRYLKLW True PC9_epitope_Rep1 1155.6076797143498 1155.60604490379 69.114 3 -0.6091179088775263 0.18110248618349578 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 137277 4671 YCRRWRYWEYW True NCI_RA007_Epitope_Rep1 1765.7936000744096 1765.79194490379 22.252 3 -0.6091238274914379 0.18110248618349578 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 129160 22772 VQRRRPRQTV True PC9_epitope_Rep4 1294.7694339318998 1294.76832993586 95.811 2 -0.6092095117084613 0.18113112482680438 1.0 ['ENST00000465739.5_3_3:158465490-158465601:+|nuORF'] 12274 13458 DILEMFTI True PC9_epitope_Rep5 980.48887002128 980.48776993586 56.783 2 -0.6092622874033425 0.1811726548477501 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant', 'ATP2C1|p.G288V|1|0.22|ENSG00000017260|chr3:130959305-130959305|G/T|missense_variant', 'ENST00000513636.1_1_3:130672694-130678186:+|nuORF'] 46525 12711 ISYINESEL True PC9_epitope_Rep2 1066.51825557326 1066.51714993586 54.198 2 -0.6092681621160981 0.1811726548477501 1.0 ['ENSG00000186105|ENST00000334994|LRRC70'] 81831 12842 PLPVPPPTG True PC9_epitope_Rep3 873.49600400705 873.49490993586 54.417 2 -0.6092757170939438 0.18117984161720485 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 41615 11617 IADSIELE True PC9_epitope_Rep1 888.44402800384 888.44292993586 49.563 2 -0.6092998038061633 0.18117984161720485 1.0 ['ENSG00000171241|ENST00000303383|SHCBP1'] 117860 9875 TVYQYQYTNWS True H1975_Epitope_Rep3 1451.6357449369898 1451.6346499358601 43.013 2 -0.6093036314090865 0.18117984161720485 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 54878 18657 KYPHYFPLL True PC9_epitope_Rep4 1176.6331661862 1176.63151490379 79.842 3 -0.6093747531999467 0.181192732768664 1.0 ['ENSG00000172009|ENST00000307741|THOP1'] 113133 7261 TLPFYRAC True PC9_epitope_Rep5 969.47422301665 969.47312993586 32.892 2 -0.6094192759714381 0.1812213668351202 1.0 ['ENST00000541059.5_1_11:67232701-67234745:-|nuORF'] 69073 5791 LTQSHLRSP True NCI_RA007_Epitope_Rep3 1037.56179215109 1037.5606899358602 29.756 2 -0.6094520607220483 0.18123425692695214 1.0 ['ENST00000564998.1_3_16:84164915-84178722:-|nuORF'] 62849 7306 LLMCRDIP True NCI_RA007_Epitope_Rep2 959.4932442090699 959.49214993586 33.038 2 -0.609481568452464 0.18126436419733652 1.0 ['ENST00000312629.9_1_11:67201493-67201693:+|nuORF'] 16470 8035 EELKVKASP True H1975_Epitope_Rep2 999.5600608155898 999.55896993586 35.856 2 -0.6094970877954043 0.18126436419733652 1.0 ['TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 70422 8841 LVTVALSLST True PC9_epitope_Rep5 1002.5961119711401 1002.59500993586 38.95 2 -0.6094989891537284 0.18126436419733652 1.0 ['nc|ENSG00000092969|P61812-2|TGFB2', 'ENSG00000092969|ENST00000366930|TGFB2'] 114425 10040 TPTTPPAVAP True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 43.61 2 -0.609514475015425 0.18126436419733652 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 58011 13248 LEHLKPTYWFS True H1975_Epitope_Rep1 1419.7186867153098 1419.7175899358601 56.055 2 -0.6095338217579125 0.18126436419733652 1.0 ['ENSG00000138231|ENST00000260803|DBR1', 'DBR1|p.T496Lfs*10|1|0.24|ENSG00000138231|chr3:138162039-138162039|C/-|frameshift_variant'] 31885 20137 GELNEMRTRLY True H1975_Epitope_Rep2 1380.68198393676 1380.68088993586 83.447 2 -0.6095440574030209 0.18126436419733652 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'ENST00000497613.2_1_8:145668058-145668220:-|nuORF'] 81548 9132 PLKEEEYRKLR True H1975_Epitope_Rep1 1459.8147123584697 1459.81360993586 40.032 2 -0.6095619066237443 0.18127725219198138 1.0 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 20194 6863 ENIDVCENCH True H1975_Epitope_Rep3 1174.4383080837401 1174.4372099358602 31.356 2 -0.6095819955875957 0.1812815790716343 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF', 'ENST00000476457.5_1_1:32739930-32740685:+|nuORF'] 131257 14659 VTFHLYLI True PC9_epitope_Rep6 1004.5695033004799 1004.56840993586 68.31 2 -0.6095838937786895 0.1812815790716343 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1', 'NLRP1|p.P1254S|1|0.2|ENSG00000091592|chr17:5521547-5521547|G/A|missense_variant'] 117637 23636 TVTITVLDI True PC9_epitope_Rep5 973.5695628701299 973.56846993586 95.895 2 -0.6095845357669427 0.1812815790716343 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 61201 12458 LILKPVTSP True H1975_Epitope_Rep2 966.61136811246 966.61026993586 53.009 2 -0.6096157363550221 0.1812815790716343 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 48915 10276 KEDQTEYLEER True PC9_epitope_Rep1 1438.65760258038 1438.6565099358602 44.411 2 -0.6096247551204115 0.18129161223301277 1.0 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 60369 10779 LGTADVVLG True PC9_epitope_Rep6 843.4701831820299 843.46963496793 52.293 1 -0.609633036851288 0.18129161223301277 1.0 ['ENSG00000179912|ENST00000402412|R3HDM2', 'nc|ENSG00000179912|Q9Y2K5|R3HDM2', 'nc|ENSG00000179912|Q9Y2K5-3|R3HDM2', 'nc|ENSG00000179912|Q9Y2K5-2|R3HDM2'] 91400 11363 RHHWWEGALDL True NCI_RA007_Epitope_Rep1 1418.6843668952597 1418.6827349037899 48.173 3 -0.6096512539989591 0.1813044983788208 1.0 ['nc|ENSG00000184385|Q8N2C9|UMODL1-AS1'] 60870 12482 LHWTVQREL True PC9_epitope_Rep5 1180.63529144452 1180.6336349037902 53.011 3 -0.6097524776652659 0.18133312347524985 1.0 ['ENST00000272638.13_1_2:136528297-136530038:+|nuORF'] 128313 7302 VPPPPPPPP True H1975_Epitope_Rep2 893.50108938749 893.49998993586 33.025 2 -0.6098808561803825 0.1814089649962226 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1019Efs*12|1|0.21|ENSG00000139734|chr13:59810896-59810896|T/-|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000188316|ENST00000341276|ENO4'] 80079 16399 PFLGSQSATP True PC9_epitope_Rep6 1003.4974605590301 1003.49636993586 75.47 2 -0.6099983631276022 0.18153202071234084 1.0 ['ENSG00000142178|ENST00000270162|SIK1'] 30333 9629 GAAPGVVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 42.379 1 -0.6100444961328647 0.1815391879131256 1.0 ['ENST00000491511.6_1_3:101498309-101498384:+|nuORF'] 127036 12677 VLSKGNIY True H1975_Epitope_Rep2 892.5018176634799 892.50072993586 53.863 2 -0.610053805474571 0.1815391879131256 1.0 ['ENST00000366844.7_2_1:225684839-225684929:-|nuORF'] 121170 8054 VESDQKKPR True PC9_epitope_Rep6 1085.58292151849 1085.58182993586 40.471 2 -0.610055511615038 0.1815391879131256 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'PPP1R17|p.A128Cfs*19|1|0.39|ENSG00000106341|chr7:31697107-31697108|-/T|frameshift_variant'] 16973 19216 EFWERNVLSL True PC9_epitope_Rep5 1291.6560864587498 1291.6549899358602 78.955 2 -0.6100697346512882 0.18156494916747978 1.0 ['ENSG00000131389|ENST00000622186|SLC6A6'] 7115 4240 AQVLHVPS True NCI_RA007_Epitope_Rep5 849.47085188837 849.46974993586 22.857 2 -0.6100880292552886 0.18156494916747978 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 79908 6924 PEPSVAEPPS True PC9_epitope_Rep1 1008.47639076128 1008.47528993586 31.439 2 -0.6101117578989282 0.1815721142497443 1.0 ['ENSG00000172818|ENST00000335987|OVOL1'] 129519 1342 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 7.445 3 -0.6101168130795321 0.1815721142497443 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 43617 13449 IGVFVRRAI True PC9_epitope_Rep3 1029.6447339294098 1029.6436299358602 56.777 2 -0.6101375954362671 0.1815721142497443 1.0 ['ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 101473 20152 SLLATAILGA True PC9_epitope_Rep4 928.5593325395998 928.55822993586 85.651 2 -0.6102194637232712 0.18160073017971234 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 60925 12375 LIARGWRI True PC9_epitope_Rep4 983.6028691174299 983.60176993586 55.407 2 -0.6102752811504849 0.18162648706489581 1.0 ['ENSG00000075240|ENST00000406902|GRAMD4'] 27079 11000 FLGFSYAP True PC9_epitope_Rep3 900.4381547777599 900.43704993586 47.298 2 -0.6103014641421797 0.18162648706489581 1.0 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000477460.6_1_6:134491408-134493948:-|nuORF', 'ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 56200 11011 LAYMMVILEKM True H1975_Epitope_Rep3 1340.6906236862799 1340.68952993586 47.442 2 -0.6105177035206658 0.18172520140986909 1.0 ['PCDHGA5|p.F369Lfs*37|1|0.24|ENSG00000253485|chr5:141365435-141365435|T/-|frameshift_variant'] 83057 18736 PSLLSRCMNCA True PC9_epitope_Rep1 1193.5355200272102 1193.53387490379 76.857 3 -0.6105298633609748 0.18172520140986909 1.0 ['ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 33152 16823 GIVALSCWL True PC9_epitope_Rep1 960.5102741722 960.50916993586 69.535 2 -0.6105483973195497 0.18172520140986909 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 58990 6989 LEVGESHVL True H1975_Epitope_Rep3 981.5131106231701 981.51200993586 31.845 2 -0.610553499652149 0.18172520140986909 1.0 ['ENSG00000118655|ENST00000650450|DCLRE1B'] 102200 5701 SLSADGLR True NCI_RA007_Epitope_Rep2 817.42938099921 817.42828993586 26.791 2 -0.610588564043954 0.18173521729552822 1.0 ['ENST00000393668.3_1_11:71991299-71991795:+|nuORF'] 63521 7676 LLYLRMFKLK True NCI_RA007_Epitope_Rep2 1323.81008500235 1323.8089899358602 34.484 2 -0.6106084309858675 0.18173521729552822 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.P1213Qfs*54|1|0.19|ENSG00000155966|chrX:148987378-148987378|C/-|frameshift_variant', 'AFF2|p.K1175M|1|0.79|ENSG00000155966|chrX:148978409-148978409|A/T|missense_variant'] 49871 16779 KIEVLEQEL True PC9_epitope_Rep6 1099.61249031127 1099.6119749679299 77.04 1 -0.6106446110185497 0.1817452325508213 1.0 ['DSP|p.E1039Q|1|0.93|ENSG00000096696|chr6:7579305-7579305|G/C|missense_variant'] 66812 5955 LSLWEIYVS True NCI_RA007_Epitope_Rep4 1108.5804619069997 1108.57936993586 29.526 2 -0.6106989948785624 0.1817452325508213 1.0 ['DCSTAMP|p.P332Qfs*7|1|0.12|ENSG00000164935|chr8:104349546-104349546|C/-|frameshift_variant', 'ENSG00000164935|ENST00000297581|DCSTAMP', 'DCSTAMP|p.Y198Tfs*34|1|0.2|ENSG00000164935|chr8:104349144-104349144|T/-|frameshift_variant', 'nc|ENSG00000164935|Q9H295-2|DCSTAMP'] 133184 22917 VVRRKLGDLRK True PC9_epitope_Rep6 1338.85718630714 1338.85555490379 101.26 3 -0.610745253186289 0.18180101944496885 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 17963 7187 EIDDGFKPV True H1975_Epitope_Rep3 1018.4971262058599 1018.49602993586 32.619 2 -0.6107857403178483 0.18180101944496885 1.0 ['KDM7A|p.S112F|1|0.22|ENSG00000006459|chr7:140133602-140133602|G/A|missense_variant'] 55726 12680 LALMTVEL True PC9_epitope_Rep1 888.4990407821599 888.49794993586 53.645 2 -0.6108041131718924 0.18180101944496885 1.0 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 110778 9592 TGIEDLQGK True H1975_Epitope_Rep1 959.4923751785899 959.49126993586 41.821 2 -0.6108183400634026 0.18180101944496885 1.0 ['ENST00000488971.1_1_2:86683605-86693535:+|nuORF'] 62419 17206 LLHEARRYHI True PC9_epitope_Rep5 1306.72583778442 1306.72474993586 71.202 2 -0.6108233013921415 0.18180101944496885 1.0 ['nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'ENSG00000114796|ENST00000242810|KLHL24'] 101406 6042 SLKMYQEEIQR True NCI_RA007_Epitope_Rep2 1423.71294971187 1423.71130490379 28.107 3 -0.6108337275699502 0.18180101944496885 1.0 ['ENST00000546787.1_1_12:113730842-113731967:+|nuORF'] 122799 11494 VGGQERTWVRP True H1975_Epitope_Rep3 1283.6734678583898 1283.6723699358602 49.335 2 -0.6108527585166799 0.18180101944496885 1.0 ['ENST00000568500.1_1_16:30709907-30710114:-|nuORF'] 45055 13314 IPHPLGHMCK True PC9_epitope_Rep3 1131.5681404848299 1131.56650490379 56.247 3 -0.6108591392195585 0.18180101944496885 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 6295 24794 APRKCFRVMK True NCI_RA007_Epitope_Rep5 1234.6790879161397 1234.67798993586 102.86 2 -0.6108798818292611 0.18181389129237788 1.0 ['ENST00000545135.5_1_12:124429208-124429382:-|nuORF'] 88647 17189 QTELVMFILFR True H1975_Epitope_Rep1 1395.75844335231 1395.75734993586 71.571 2 -0.6110406494876093 0.18188968945662776 1.0 ['XPO5|p.L158F|1|0.22|ENSG00000124571|chr6:43570649-43570649|C/A|missense_variant'] 91139 19742 RFWKLILLTWL True NCI_RA007_Epitope_Rep3 1487.9016768880697 1487.9005699358602 86.063 2 -0.6110619219680331 0.18190255950414524 1.0 ['ENST00000465952.5_1_13:31205167-31205455:+|nuORF'] 55940 4098 LARHGSAI True PC9_epitope_Rep6 823.46643521427 823.46532993586 22.642 2 -0.6110830382085625 0.1819154291467405 1.0 ['PLEKHG3|p.T658I|1|0.29|ENSG00000126822|chr14:64741490-64741490|C/T|missense_variant'] 108998 8715 TAGSFSLSVR True PC9_epitope_Rep6 1023.53490869691 1023.53380993586 43.379 2 -0.6111825291219998 0.181991222136576 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 42590 19234 IEGAVAYVPQ True PC9_epitope_Rep4 1045.5444107514497 1045.5433099358602 82.084 2 -0.6112370109806536 0.18200408997955012 1.0 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6'] 13551 9973 DPATQKLI True NCI_RA007_Epitope_Rep5 884.4967322830399 884.49562993586 45.003 2 -0.6113220130455709 0.18201837171259594 1.0 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000475782.1_1_3:51978808-51978934:+|nuORF'] 60575 6743 LHGFTAWFSVH True H1975_Epitope_Rep1 1300.6352914445201 1300.6336349037902 30.979 3 -0.6113382621371445 0.18201837171259594 1.0 ['ENST00000486520.1_1_21:48081621-48084236:+|nuORF', 'nc|ENSG00000160310|P55345-3|PRMT2', 'ENSG00000160310|ENST00000355680|PRMT2'] 41790 12211 IARLYHDCDP True PC9_epitope_Rep2 1201.5549925184898 1201.55335490379 52.281 3 -0.6113861872785604 0.18201837171259594 1.0 ['ENST00000560933.5_1_22:39487593-39488026:+|nuORF'] 44135 20366 IIRLRNKTLTE True H1975_Epitope_Rep3 1355.8248831193498 1355.82378993586 85.156 2 -0.6113996161082378 0.18201837171259594 1.0 ['nc|ENSG00000101109|Q13043-2|STK4', 'ENSG00000101109|ENST00000372806|STK4'] 125295 8101 VIMPFREVAK True H1975_Epitope_Rep1 1188.66890007192 1188.66780993586 36.106 2 -0.611414357664145 0.18201837171259594 1.0 ['nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENSG00000115183|ENST00000263635|TANC1', 'ENST00000464096.1_1_2:159992742-160005888:+|nuORF', 'TANC1|p.S482Lfs*14|1|0.37|ENSG00000115183|chr2:159172210-159172210|G/-|frameshift_variant'] 123688 14736 VGRAGPRP True NCI_RA007_Epitope_Rep3 808.4667695674399 808.46566993586 65.373 2 -0.6114388669741901 0.18201837171259594 1.0 ['ENSG00000112164|ENST00000373256|GLP1R', 'GLP1R|p.G248Afs*23|1|0.06|ENSG00000112164|chr6:39073687-39073687|G/-|frameshift_variant'] 12799 16450 DLFGVKGG True PC9_epitope_Rep4 791.4177536863499 791.41664993586 71.243 2 -0.6114676577631524 0.18203123771175111 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 118266 16600 TYLKAVKLF True PC9_epitope_Rep2 1081.65356727761 1081.6524699358602 69.094 2 -0.6114903106538442 0.1820441033061751 1.0 ['ENSG00000136381|ENST00000258886|IREB2'] 941 3376 ADQRPAGRPG True NCI_RA007_Epitope_Rep2 1023.5209899682698 1023.5198899358601 17.793 2 -0.6115079497206203 0.18207269695968795 1.0 ['ENST00000563663.5_1_15:75137426-75165648:-|nuORF'] 25740 14993 FESSTPCL True PC9_epitope_Rep4 882.3793195722999 882.37822993586 65.609 2 -0.6115135045470572 0.18208556149732621 1.0 ['ENSG00000197081|ENST00000356956|IGF2R'] 60180 17461 LGPCYYLL True PC9_epitope_Rep4 940.47282603432 940.47172993586 75.162 2 -0.6115589624018773 0.18210842520799586 1.0 ['ENST00000426767.1_1_7:29690666-29690840:-|nuORF'] 3245 6475 AGEVFIHKDK True PC9_epitope_Rep6 1142.6084079903399 1142.6067749037902 33.553 3 -0.6115649203385406 0.18210842520799586 1.0 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'NONO|p.G191Afs*25|1|0.54|ENSG00000147140|chrX:71294445-71294445|A/-|frameshift_variant', 'ENST00000486613.6_1_X:70504267-70513876:+|nuORF'] 101302 9615 SLIHATFTL True PC9_epitope_Rep4 1001.5545815123301 1001.55348993586 44.61 2 -0.6116174098449771 0.18210842520799586 1.0 ['ENSG00000177476|ENST00000320002|OR2G3'] 21618 14138 ERRPQRREQRR True H1975_Epitope_Rep1 1565.8723358606496 1565.8712299358601 59.555 2 -0.6116613751925022 0.1821341511362743 1.0 ['ENST00000542643.6_1_1:21923469-21929393:-|nuORF', 'ENST00000374763.6_2_1:21923469-21929399:-|nuORF'] 102458 5253 SLTYDIANNK True NCI_RA007_Epitope_Rep5 1137.56660274801 1137.56494490379 26.902 3 -0.611667809508622 0.1821341511362743 1.0 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 117041 6178 TVIASTDP True H1975_Epitope_Rep3 802.4072485723 802.40614993586 28.774 2 -0.6117467166937728 0.18222564715503412 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 47179 8084 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep2 1208.4954293164699 1208.4943299358602 36.042 2 -0.61175391600921 0.18225423435607907 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 69340 19262 LTVLETPSL True PC9_epitope_Rep3 971.5539128059901 971.55280993586 79.312 2 -0.6118467075360401 0.18232999937095049 1.0 ['ENST00000495037.1_1_3:66430689-66454678:-|nuORF', 'ENST00000496559.6_1_3:66430689-66456253:-|nuORF', 'ENSG00000144749|ENST00000273261|LRIG1'] 7118 5634 AQVLHVPS True PC9_epitope_Rep5 849.47085188837 849.46974993586 26.671 2 -0.6118981496375306 0.18237431002217364 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 130471 19830 VSPKEVATL True PC9_epitope_Rep2 942.5385970950199 942.53750993586 81.667 2 -0.6119417291121 0.18238716779367825 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 117144 8927 TVKYTERR True PC9_epitope_Rep1 1051.57744221523 1051.5763499358602 39.18 2 -0.6120585201340512 0.1824000251607932 1.0 ['ENSG00000113719|ENST00000393784|ERGIC1', 'nc|ENSG00000113719|Q969X5-2|ERGIC1'] 135709 18695 WLRRWLRFLL True NCI_RA007_Epitope_Rep3 1457.8771934757299 1457.8755449037901 81.769 3 -0.6120947043618375 0.18242860737199648 1.0 ['ENST00000341418.9_1_15:68114320-68117168:+|nuORF'] 9159 15244 AVLDRNVAI True PC9_epitope_Rep6 969.5607295219299 969.55962993586 70.744 2 -0.6121666755126948 0.1824414636831098 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 53522 27204 KRLILRLEIWI True PC9_epitope_Rep3 1451.93403964551 1451.93239490379 111.95 3 -0.6121849524976234 0.1824543195898984 1.0 ['DCBLD1|p.G85Efs*31|1|0.56|ENSG00000164465|chr6:117503906-117503906|G/-|frameshift_variant'] 130758 11274 VSYQSVLS True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 48.412 1 -0.6122390141404653 0.18246430593119065 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF', 'ENST00000590884.5_1_18:43437816-43458370:-|nuORF'] 131185 9970 VTELLARYK True H1975_Epitope_Rep1 1091.63389446219 1091.63278993586 43.286 2 -0.6122427736497238 0.18246430593119065 1.0 ['ENSG00000099817|ENST00000615234|POLR2E', 'ENST00000586817.5_1_19:1089487-1094188:-|nuORF'] 135548 21052 WKRKEDKKRVV True H1975_Epitope_Rep1 1470.87831567454 1470.87667490379 87.44 3 -0.6122951335065807 0.1824771608723682 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 31165 21128 GAWPSRWRP True PC9_epitope_Rep1 1111.56754623787 1111.5664499358602 86.1 2 -0.6125262140362213 0.18255291046888267 1.0 ['ENST00000216733.7_1_14:23834263-23834767:-|nuORF'] 37392 7985 GVSSLSALVP True H1975_Epitope_Rep2 928.5229470308799 928.52184993586 35.663 2 -0.6125558548698992 0.18255715229080846 1.0 ['ENSG00000241484|ENST00000356099|ARHGAP8', 'nc|ENSG00000241484|P85298-3|ARHGAP8', 'nc|ENSG00000241484|P85298|ARHGAP8'] 15184 7526 EAAVTMVNYYT True NCI_RA007_Epitope_Rep1 1260.56963952312 1260.5685499358601 33.267 2 -0.61257363662903 0.18255715229080846 1.0 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 101703 13002 SLMNSARR True H1975_Epitope_Rep1 933.48143365541 933.48088496793 55.095 1 -0.6125795733687202 0.18255715229080846 1.0 ['EFCAB5|p.R974M|1|0.22|ENSG00000176927|chr17:30078398-30078398|G/T|missense_variant'] 44742 13643 ILYETKTKPD True NCI_RA007_Epitope_Rep5 1206.64960409598 1206.6485099358601 59.161 2 -0.612582082903409 0.18255715229080846 1.0 ['ENST00000589123.5_2_19:3465565-3466177:+|nuORF'] 130870 9824 VTDAAVLNN True PC9_epitope_Rep1 915.46616043075 915.46506993586 42.649 2 -0.6127068258510631 0.18262715195346277 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1', 'ENSG00000162419|ENST00000373816|GMEB1'] 26790 17523 FKTWASPVVT True PC9_epitope_Rep5 1134.6073453611798 1134.6062499358602 72.408 2 -0.6127210098021806 0.18262715195346277 1.0 ['IGSF1|p.K1066Nfs*5|1|0.23|ENSG00000147255|chrX:131275276-131275276|G/-|frameshift_variant', 'nc|ENSG00000147255|Q8N6C5-2|IGSF1', 'ENSG00000147255|ENST00000361420|IGSF1', 'nc|ENSG00000147255|Q8N6C5-4|IGSF1'] 16649 15900 EEQLNHLLL True PC9_epitope_Rep5 1107.59242357303 1107.5913299358601 66.149 2 -0.6127210406265938 0.18262715195346277 1.0 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-3|DMD'] 20723 3718 EQEQCLYRVR True NCI_RA007_Epitope_Rep2 1322.6401191247799 1322.63848490379 19.108 3 -0.6128557448802724 0.1826714460899915 1.0 ['TAF2|p.F691L|1|0.29|ENSG00000064313|chr8:119783420-119783420|G/T|missense_variant'] 59413 14272 LFLSRKGVE True PC9_epitope_Rep4 1047.6076797143498 1047.60658993586 62.8 2 -0.6128801552516264 0.18268142372028676 1.0 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|107|3|anti-sense'] 112372 16798 TLAQLESLEI True PC9_epitope_Rep5 1115.60740493083 1115.60630993586 69.622 2 -0.612885838723116 0.18268142372028676 1.0 ['nc|ENSG00000230561|P0DO97|CCDC192', 'ENSG00000230561|ENST00000514853|CCDC192'] 69503 5129 LVATLPGV True H1975_Epitope_Rep1 768.47454028648 768.47344993586 24.798 2 -0.612913001554554 0.18268852871358726 1.0 ['ENST00000467451.1_1_X:153196080-153197612:-|nuORF'] 28979 17427 FTDVYNFEFED True PC9_epitope_Rep1 1424.5772270013597 1424.57612993586 71.829 2 -0.612928309658084 0.18268852871358726 1.0 ['ENSG00000179630|ENST00000325686|LACC1'] 110142 17488 TENKVPGAYIY True H1975_Epitope_Rep2 1253.6292030045697 1253.62810993586 72.558 2 -0.6129426134437695 0.18268852871358726 1.0 ['PCDH10|p.N476K|1|0.16|ENSG00000138650|chr4:133151568-133151568|C/G|missense_variant'] 44873 13269 INITAVAQV True PC9_epitope_Rep3 927.5389314481898 927.53782993586 56.074 2 -0.6130419166021713 0.1827485380116959 1.0 ['ENSG00000077943|ENST00000378076|ITGA8'] 142399 2891 YYESTRKENL True PC9_epitope_Rep1 1301.6251802532897 1301.62354490379 15.756 3 -0.6131192093755589 0.18282139151759047 1.0 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.Q1849Pfs*5|1|0.36|ENSG00000143631|chr1:152309340-152309341|-/G|frameshift_variant', 'FLG|p.R145Kfs*9|1|0.23|ENSG00000143631|chr1:152314454-152314455|-/G|frameshift_variant', 'FLG|p.E160Rfs*10|1|0.26|ENSG00000143631|chr1:152314408-152314409|-/T|frameshift_variant'] 135233 20309 WFHFKRYRYRR True PC9_epitope_Rep1 1713.9116814914898 1713.9105899358601 82.947 2 -0.6131347347930729 0.18282139151759047 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 125384 14925 VIRRLRERGEP True PC9_epitope_Rep2 1379.8109643907096 1379.8098699358602 62.67 2 -0.6131737587619188 0.1828342372082056 1.0 ['PRPF18|p.G145Vfs*13|1|0.08|ENSG00000165630|chr10:13610108-13610108|G/-|frameshift_variant', 'ENSG00000165630|ENST00000378572|PRPF18'] 34878 9656 GQLIQNVGSI True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 44.767 2 -0.6132029682336811 0.18284420830909978 1.0 ['B3GNT3|p.P244S|1|0.17|ENSG00000179913|chr19:17811733-17811733|C/T|missense_variant'] 125358 7890 VIQSTLDGLLC-[Carbamidomethyl] True H1975_Epitope_Rep1 1217.6325744122798 1217.6314699358602 35.301 2 -0.6132150700790151 0.18284420830909978 1.0 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 101029 2622 SLGARVEQRL True NCI_RA007_Epitope_Rep3 1127.64110510095 1127.63944490379 14.775 3 -0.6132235132940861 0.18285705303530447 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 19780 8612 ELSEQQCTYLK True NCI_RA007_Epitope_Rep2 1340.6282170284 1340.62657490379 38.143 3 -0.6132658769258861 0.1828698973577076 1.0 ['ENSG00000153237|ENST00000283233|CCDC148', 'nc|ENSG00000153237|Q8NFR7-3|CCDC148', 'CCDC148|p.T283Yfs*16|1|0.48|ENSG00000153237|chr2:158313812-158313813|-/A|frameshift_variant', 'nc|ENSG00000153237|Q8NFR7-4|CCDC148', 'ENST00000451554.1_1_2:159145303-159312956:-|nuORF'] 5432 10292 ALTVDAHTV True PC9_epitope_Rep3 925.48689587533 925.48578993586 44.536 2 -0.6133448833699042 0.18290842790229794 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 88498 13257 QSVGLLTNEL True PC9_epitope_Rep4 1072.57643915572 1072.57534993586 58.892 2 -0.6134179236536889 0.18290842790229794 1.0 ['ENSG00000198483|ENST00000355594|ANKRD35'] 121390 16256 VEVQKLLKC True PC9_epitope_Rep3 1058.6158018699 1058.6147099358602 67.667 2 -0.6134538280125689 0.18290842790229794 1.0 ['ENSG00000173988|ENST00000595396|LRRC63'] 88908 19034 QVESVQLKV True PC9_epitope_Rep3 1028.5866099165999 1028.58607496793 78.435 1 -0.6135128648219152 0.18295270578250003 1.0 ['ENST00000492185.5_1_6:31920080-31921650:-|nuORF', 'ENST00000488426.5_1_6:31920080-31922695:-|nuORF', 'nc|ENSG00000204356|P18615-4|NELFE', 'ENSG00000204356|ENST00000375429|NELFE', 'nc|ENSG00000204356|P18615-3|NELFE'] 129518 975 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 5.4198 3 -0.6135341149027935 0.1829812649314724 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 126924 15028 VLQYHKPV True PC9_epitope_Rep5 982.5600012459399 982.55890993586 62.809 2 -0.6135752343196219 0.18302266369094394 1.0 ['ENSG00000272325|ENST00000607016|NUDT3'] 31570 5794 GEEKTIQVP True NCI_RA007_Epitope_Rep4 999.5236753068699 999.52256993586 28.91 2 -0.6135924020896967 0.18302266369094394 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 82282 4903 PPGPGGGTL True NCI_RA007_Epitope_Rep5 751.38645355807 751.38534993586 25.552 2 -0.6136587216547867 0.18309261500259316 1.0 ['ENST00000430109.1_1_1:1369598-1369895:-|nuORF'] 113593 13789 TLVFQDNQG True PC9_epitope_Rep1 1020.4876241513198 1020.48652993586 57.884 2 -0.6136605835705657 0.18309261500259316 1.0 ['ENST00000304636.7_1_2:189849938-189851827:+|nuORF'] 76085 18877 NMLHWSQL True PC9_epitope_Rep4 1027.49093570995 1027.4898299358601 80.696 2 -0.6136682732242427 0.18309261500259316 1.0 ['ENSG00000204022|ENST00000371939|LIPJ'] 141729 5327 YTWRWVWSWEW True H1975_Epitope_Rep3 1683.7622828627896 1683.76063490379 25.562 3 -0.6137004444437717 0.1831054534024831 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 132681 25027 VVGRIRNKP True NCI_RA007_Epitope_Rep5 1037.6457965585698 1037.64468993586 103.77 2 -0.6138125154628518 0.18318115384010938 1.0 ['nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 22505 6402 ETGERVQLA True H1975_Epitope_Rep2 1001.5141732523297 1001.51306993586 29.549 2 -0.6138277474777586 0.1831939904450591 1.0 ['GYPA|p.H85L|1|0.2|ENSG00000170180|chr4:144118731-144118731|T/A|missense_variant', 'nc|ENSG00000170180|P02724-3|GYPA', 'nc|ENSG00000170180|P02724-2|GYPA', 'nc|ENSG00000170180|P02724|GYPA', 'ENSG00000170180|ENST00000641688|GYPA'] 70066 17088 LVNGERDLL True PC9_epitope_Rep6 1027.56620882519 1027.5651099358602 78.296 2 -0.6138497861550505 0.18320682664655133 1.0 ['ENST00000529460.1_1_11:118272380-118277657:+|nuORF'] 17945 10669 EIAWISTLP True H1975_Epitope_Rep3 1028.55424715916 1028.5531499358601 46.111 2 -0.6138706328888065 0.1832353773140145 1.0 ['ENSG00000180433|ENST00000641861|OR6K6', 'ENSG00000196171|ENST00000359610|OR6K2', 'nc|ENSG00000180433|Q8NGW6|OR6K6'] 20172 6102 ENFLIQKREFL True PC9_epitope_Rep4 1435.7823496010299 1435.78069490379 30.481 3 -0.6139101016327535 0.1832639270841518 1.0 ['ENSG00000150783|ENST00000280358|TEX12'] 30779 7583 GALTGTPPSLP True PC9_epitope_Rep1 1009.5444107514498 1009.54330993586 33.987 2 -0.6139573776662733 0.18328095537397862 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 85584 6155 QGGGKEMVFNI True PC9_epitope_Rep5 1178.5753936098997 1178.5737449037902 28.66 3 -0.6139660789189569 0.18328095537397862 1.0 ['ENST00000514450.2_1_4:15471657-15513157:+|nuORF'] 102134 9553 SLRPRKQSQ True H1975_Epitope_Rep1 1098.62578938998 1098.62468993586 41.67 2 -0.6139665979407759 0.18328095537397862 1.0 ['ENSG00000260456|ENST00000567970|C16orf95'] 120993 11875 VEPRNTDFWKR True NCI_RA007_Epitope_Rep2 1446.7367963909398 1446.7356899358601 50.793 2 -0.6140073044832403 0.18328095537397862 1.0 ['ENST00000551739.5_1_12:56332068-56333318:+|nuORF', 'ENST00000552478.5_1_12:56331951-56332941:+|nuORF'] 129515 671 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 3.7357 3 -0.6140190257800509 0.18328095537397862 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 79303 14498 PAPVTLQP True PC9_epitope_Rep3 821.46470387877 821.46360993586 60.886 2 -0.6140423648629936 0.18329378859540232 1.0 ['ENST00000456585.5_1_6:168397599-168397749:-|nuORF'] 79579 5741 PDGRCFCHAW True NCI_RA007_Epitope_Rep2 1190.4749683759799 1190.4738699358602 26.948 2 -0.6140582247575765 0.18330662141353193 1.0 ['nc|ENSG00000050628|P43115-7|PTGER3', 'nc|ENSG00000050628|P43115-10|PTGER3'] 57300 6278 LEAAGDKF True PC9_epitope_Rep2 849.42323298961 849.42212993586 29.544 2 -0.6140920865346624 0.18333516647549614 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 116128 7647 TSSNQQKNFK True H1975_Epitope_Rep3 1180.58364979448 1180.58254993586 34.396 2 -0.614223029828534 0.18337654175504753 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.Q1101Lfs*31|1|0.16|ENSG00000119596|chr14:74798598-74798599|-/T|frameshift_variant'] 1581 9057 AEEVWDDEQK True NCI_RA007_Epitope_Rep2 1247.5306111621096 1247.52950993586 39.833 2 -0.614279944494751 0.18337654175504753 1.0 ['ENSG00000189433|ENST00000339480|GJB4'] 15405 19160 EAISYVREKTK True H1975_Epitope_Rep3 1322.7194149913 1322.7183099358601 80.347 2 -0.614337231467769 0.18338360985419808 1.0 ['ENSG00000138031|ENST00000679454|ADCY3', 'nc|ENSG00000138031|O60266-2|ADCY3'] 72754 4000 MNPRRFLWKWK True NCI_RA007_Epitope_Rep2 1560.8499927517198 1560.84835490379 20.197 3 -0.6143425231424058 0.18338360985419808 1.0 ['ENST00000429378.5_3_16:242971-256079:-|nuORF'] 107029 12184 SVFQNVLVSA True H1975_Epitope_Rep1 1062.57095985246 1062.5698699358602 51.885 2 -0.6143656797481236 0.18338360985419808 1.0 ['ZNF217|p.G588V|1|0.22|ENSG00000171940|chr20:53577001-53577001|C/A|missense_variant'] 74392 15129 NESAVIVAP True PC9_epitope_Rep6 898.4759968384599 898.47544496793 70.256 1 -0.6143806478712781 0.1833877961415195 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 46747 10117 ITENDIQIA True PC9_epitope_Rep2 1015.5185899264299 1015.51748993586 44.253 2 -0.6144096467113819 0.1833877961415195 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 36875 17302 GVLLRRCLRNE True PC9_epitope_Rep4 1327.7506726332697 1327.7490149037899 74.554 3 -0.6144304164020223 0.1833877961415195 1.0 ['ENST00000528614.1_1_11:111285201-111285411:-|nuORF'] 129514 611 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 3.3993 3 -0.6144658455768599 0.1833877961415195 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 67641 19695 LSVQSVCLSII True PC9_epitope_Rep2 1160.647495921 1160.64638993586 81.144 2 -0.6145043364628472 0.18340769134095763 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF', 'ENST00000519277.5_1_8:74708911-74722861:-|nuORF', 'ENST00000519255.2_1_8:74708126-74722861:-|nuORF', 'ENSG00000104343|ENST00000602593|UBE2W', 'nc|ENSG00000104343|Q96B02-2|UBE2W', 'nc|ENSG00000104343|Q96B02-3|UBE2W'] 14535 4904 DTQWTKVGRTP True H1975_Epitope_Rep2 1287.6571490879098 1287.6555149037902 23.946 3 -0.6145168275566474 0.18340769134095763 1.0 ['ENST00000537356.3_1_X:103357914-103358230:+|nuORF'] 96688 5323 SALDRESVL True NCI_RA007_Epitope_Rep5 988.5189242796 988.51782993586 27.167 2 -0.6145229264325066 0.18340769134095763 1.0 ['PCDHA6|p.S419L|1|0.24|ENSG00000081842|chr5:140829347-140829347|C/T|missense_variant'] 96826 19264 SARVAELLLL True PC9_epitope_Rep4 1083.6651945904698 1083.6640899358601 82.202 2 -0.6145347416885527 0.18340769134095763 1.0 ['ENST00000380142.4_1_9:22005988-22008700:-|nuORF', 'nc|ENSG00000147889|P42771-2|CDKN2A', 'CDKN2A|p.G101Rfs*12|1|0.23|ENSG00000147889|chr9:21971040-21971059|GCACGTCCAGCCGCGCCCCG/-|frameshift_variant', 'CDKN2A|p.L104Cfs*11|1|0.2|ENSG00000147889|chr9:21971037-21971050|CGCGCACGTCCAGC/-|frameshift_variant', 'CDKN2A|p.G101Wfs*19|1|0.48|ENSG00000147889|chr9:21971058-21971059|-/A|frameshift_variant', 'ENSG00000147883|ENST00000276925|CDKN2B', 'CDKN2A|p.R112Vfs*34|1|0.31|ENSG00000147889|chr9:21971025-21971025|G/-|frameshift_variant', 'ENSG00000147889|ENST00000304494|CDKN2A', 'nc|ENSG00000147889|P42771-4|CDKN2A', 'chr9:21968771-21970902|370|10.73|0.1|6.69|-|ENST00000498124|CDKN2A,CDKN2A'] 29877 9519 FVTQFTTQFL True NCI_RA007_Epitope_Rep3 1230.6284747285797 1230.62683490379 44.536 3 -0.6145833976858086 0.18346764692021303 1.0 ['ENSG00000204478|ENST00000602960|PRAMEF20'] 60060 19613 LGLFQGQNSL True PC9_epitope_Rep2 1075.56620882519 1075.5651099358602 80.826 2 -0.6146454054004314 0.18348047378177135 1.0 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 19685 10647 ELRKEISV True PC9_epitope_Rep1 972.5603951687599 972.55928993586 45.845 2 -0.6147144334600972 0.1834904178448005 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'CACNA1B|p.V1828L|1|0.23|ENSG00000148408|chr9:138112451-138112451|G/T|missense_variant'] 132013 8972 VTSSFCEDK True H1975_Epitope_Rep3 1014.4328116971399 1014.43170993586 39.506 2 -0.6147289997718971 0.1834904178448005 1.0 ['ENST00000284637.13_1_4:170077595-170077751:-|nuORF'] 111938 12887 TIPYLIHVHHP True H1975_Epitope_Rep3 1325.72444080209 1325.7233499358601 54.796 2 -0.6147998744475678 0.1834987748947666 1.0 ['PER3|p.I231T|1|0.12|ENSG00000049246|chr1:7798575-7798575|T/C|missense_variant'] 58902 11088 LETETESL True PC9_epitope_Rep4 920.43385724296 920.43276993586 50.425 2 -0.6148293478953947 0.1834987748947666 1.0 ['ENST00000395474.7_2_3:49053065-49053377:+|nuORF'] 60281 15858 LGRRQWWWRRR True H1975_Epitope_Rep3 1654.9181638542598 1654.9170699358601 66.447 2 -0.6148558692006247 0.1834987748947666 1.0 ['ENST00000296754.7_2_5:96139638-96143632:-|nuORF'] 125428 9027 VITGITDPG True NCI_RA007_Epitope_Rep4 871.46509780159 871.46454496793 41.554 1 -0.6148673421634676 0.1834987748947666 1.0 ['ENST00000599671.1_1_19:52399801-52400277:-|nuORF'] 141008 10981 YSKDPFEF True NCI_RA007_Epitope_Rep3 1031.46001242115 1031.4589099358602 50.28 2 -0.6148686428673963 0.1834987748947666 1.0 ['nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1'] 123406 12444 VGNALLNVVL True NCI_RA007_Epitope_Rep4 1010.61243074162 1010.61132993586 54.874 2 -0.6148839915864173 0.1834987748947666 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 129513 550 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 3.0619 3 -0.6149139936132552 0.1834987748947666 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 103582 5929 SPSPPQAEA True PC9_epitope_Rep1 882.4083112014599 882.40720993586 27.619 2 -0.6149271142087239 0.1834987748947666 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 126582 14504 VLLVAAAA True NCI_RA007_Epitope_Rep4 726.46397560278 726.4634249679301 63.151 1 -0.6149416678912889 0.18351159905134368 1.0 ['ENST00000302014.10_1_5:140012494-140012747:-|nuORF'] 113449 12448 TLSQSLLLDI True PC9_epitope_Rep1 1101.6281403754099 1101.6270499358602 52.746 2 -0.6150144379027253 0.18357154075702842 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 83075 11104 PSLTHDKGLP True H1975_Epitope_Rep3 1063.56620882519 1063.5651099358602 47.805 2 -0.6150494320336252 0.18361289106671694 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 110544 12126 TFNIWHSEW True PC9_epitope_Rep1 1218.54580773378 1218.54415490379 51.505 3 -0.6150553352747313 0.18361289106671694 1.0 ['ENST00000299980.8_2_16:71766447-71766639:-|nuORF'] 120106 19679 VDYNYPATL True PC9_epitope_Rep2 1054.49712620586 1054.4960299358602 81.082 2 -0.6151468624363136 0.18367282835738855 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 12556 23014 DKQLLISSSSA True NCI_RA007_Epitope_Rep2 1147.60846755999 1147.60736993586 96.027 2 -0.61517742759605 0.1836856487734397 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 74424 14111 NETFTFKVP True PC9_epitope_Rep5 1081.54441075145 1081.5433099358602 59.288 2 -0.6153054064001947 0.183698468786808 1.0 ['ENSG00000143858|ENST00000367268|SYT2'] 16989 11906 EGAFLGPRLP True H1975_Epitope_Rep1 1055.5763795860698 1055.5752899358602 50.797 2 -0.615438626554236 0.18373981186299607 1.0 ['ENST00000541956.5_1_12:6940459-6946454:+|nuORF'] 64499 9373 LPQSERITG True PC9_epitope_Rep1 999.53490869691 999.53380993586 40.911 2 -0.6154537716237598 0.18373981186299607 1.0 ['ENST00000299237.2_1_16:58032340-58033481:-|nuORF'] 130398 19159 VSLLKKTDP True PC9_epitope_Rep5 999.5964463243099 999.59534993586 78.732 2 -0.6155864201060207 0.18384396739898554 1.0 ['ENSG00000115159|ENST00000438166|GPD2', 'nc|ENSG00000115159|P43304-2|GPD2'] 95080 17042 RTYKLRKEQ True NCI_RA007_Epitope_Rep4 1220.6989543302398 1220.6978499358602 73.838 2 -0.6156266596661072 0.18384396739898554 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 19683 10981 ELRKAPSAV True PC9_epitope_Rep1 969.5607295219298 969.55962993586 47.128 2 -0.6156969843203086 0.18385678391959798 1.0 ['ENST00000461448.5_1_1:28908107-28908347:-|nuORF'] 58528 7891 LEQGSSRR True PC9_epitope_Rep1 931.48354183039 931.48244993586 35.179 2 -0.6157371873872197 0.1838853033086792 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 96956 7465 SAVYQDDP True H1975_Epitope_Rep2 893.3766767200099 893.37556993586 33.661 2 -0.6158058400823617 0.18391093384419704 1.0 ['CDH20|p.D519Y|1|0.15|ENSG00000101542|chr18:61545051-61545051|G/T|missense_variant'] 129516 732 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 4.0724 3 -0.6158077039195141 0.18391093384419704 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 42173 19316 IDQFGPPMI True PC9_epitope_Rep5 1016.5001034113199 1016.49900993586 79.344 2 -0.6158291879131819 0.18391797255283737 1.0 ['nc|ENSG00000139926|Q96NE9-2|FRMD6', 'ENSG00000139926|ENST00000344768|FRMD6', 'FRMD6|p.R241Gfs*7|1|0.14|ENSG00000139926|chr14:51711534-51711534|A/-|frameshift_variant'] 68551 9760 LTGPYSVMPS True H1975_Epitope_Rep3 1050.50558271458 1050.5044899358602 42.565 2 -0.6158361316809251 0.18391797255283737 1.0 ['nc|ENSG00000078674|Q15154-2|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1'] 125849 13772 VLAGFGGLNK True PC9_epitope_Rep2 974.5549158654999 974.55380993586 58.259 2 -0.615851741404282 0.18391797255283737 1.0 ['ENSG00000171724|ENST00000302536|VAT1L'] 42150 17606 IDPDAATCET True H1975_Epitope_Rep2 1034.42264093626 1034.4215499358602 73.035 2 -0.6159003067260449 0.18393078650273997 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'ENST00000419548.4_1_20:3669209-3669317:-|nuORF'] 40698 24274 HRRVRLHRHG True PC9_epitope_Rep1 1322.76568596414 1322.7640349037902 98.192 3 -0.6159718768283207 0.183975003140309 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 86057 6175 QHRQRWRL True PC9_epitope_Rep5 1178.6533415504998 1178.65168490379 28.736 3 -0.6160032911700366 0.1840163290940493 1.0 ['ENST00000473262.5_1_3:124837626-124909342:-|nuORF'] 141749 17741 YTYPYAYYMES True H1975_Epitope_Rep2 1449.5798698536498 1449.5782349037902 73.562 3 -0.6160269022361113 0.1840163290940493 1.0 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2'] 100140 16670 SITEEFYRYML True PC9_epitope_Rep1 1450.6802526012598 1450.67914993586 68.949 2 -0.6160491416122004 0.18402914069491766 1.0 ['SPHKAP|p.T1640Pfs*16|1|0.09|ENSG00000153820|chr2:227991042-227991042|G/-|frameshift_variant', 'nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 82654 19144 PQPDVFPLF True NCI_RA007_Epitope_Rep4 1058.54368247546 1058.5425899358602 82.784 2 -0.6160981376569823 0.1840419518934874 1.0 ['AATF|p.V505Sfs*3|1|0.48|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 119239 16446 VALDLATSRI True PC9_epitope_Rep3 1057.61315901761 1057.61206993586 68.396 2 -0.6161525967574123 0.18408616331464997 1.0 ['COL28A1|p.A835S|1|0.23|ENSG00000215018|chr7:7373403-7373403|C/A|missense_variant'] 119793 3393 VCNRHCENGG True PC9_epitope_Rep1 1087.42874645955 1087.42764993586 17.972 2 -0.6161884704303245 0.1840989732156875 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 5044 7053 ALKKPTVNL True NCI_RA007_Epitope_Rep2 982.6175161220599 982.61640993586 32.059 2 -0.6162235159312702 0.18414029138407434 1.0 ['ENSG00000138722|ENST00000264790|MMRN1', 'MMRN1|p.T1022N|1|0.12|ENSG00000138722|chr4:89936745-89936745|C/A|missense_variant'] 85439 8105 QEYKEAASSY True H1975_Epitope_Rep3 1174.5142328219797 1174.5131299358602 36.152 2 -0.6162237804934401 0.18414029138407434 1.0 ['ENSG00000065457|ENST00000564657|ADAT1', 'ENST00000568478.1_1_16:75634116-75635755:-|nuORF', 'nc|ENSG00000065457|Q9BUB4-2|ADAT1'] 15243 15629 EAELLWLVSFS True H1975_Epitope_Rep1 1292.66525416012 1292.66414993586 65.404 2 -0.616244355667719 0.18415020879776445 1.0 ['OR2G2|p.F203Lfs*9|1|0.15|ENSG00000177489|chr1:247588964-247588964|T/-|frameshift_variant'] 20763 10815 EQFSFVEYCPP True H1975_Epitope_Rep3 1344.5696395231198 1344.5685499358601 46.679 2 -0.6162460776971607 0.18415020879776445 1.0 ['ENSG00000189319|ENST00000337318|FAM53B', 'nc|ENSG00000189319|Q14153-2|FAM53B', 'ENST00000494792.1_1_10:126307332-126395327:-|nuORF'] 6973 12955 AQLEKEVP True PC9_epitope_Rep6 912.4916469025999 912.49054993586 61.383 2 -0.6162855701500316 0.18417582417582418 1.0 ['ENSG00000104142|ENST00000220509|VPS18', 'VPS18|p.D357Gfs*27|1|0.25|ENSG00000104142|chr15:40899884-40899885|-/G|frameshift_variant'] 59321 19012 LFIENNNI True PC9_epitope_Rep1 975.50254593947 975.50144993586 77.918 2 -0.6162861710848019 0.18417582417582418 1.0 ['nc|ENSG00000108231|O95970-2|LGI1', 'ENSG00000108231|ENST00000371418|LGI1'] 61482 24997 LKARGGGG True H1975_Epitope_Rep2 714.4136713654199 714.41312496793 102.73 1 -0.6163186783097478 0.18418573985118206 1.0 ['ENST00000378119.8_1_6:24719560-24720079:-|nuORF', 'ENST00000308020.5_1_11:490627-491155:+|nuORF'] 82788 25243 PRPRKRAKVED True PC9_epitope_Rep2 1350.7844152896998 1350.7833099358602 102.77 2 -0.6163234423348994 0.18418573985118206 1.0 ['nc|ENSG00000059122|Q4VC44-3|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-4|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-2|FLYWCH1', 'ENSG00000059122|ENST00000253928|FLYWCH1'] 106924 11224 SVDQTVKI True PC9_epitope_Rep5 888.4916469025999 888.49054993586 48.163 2 -0.6163351260080393 0.18421424422711646 1.0 ['nc|ENSG00000134574|Q92466-4|DDB2', 'ENSG00000134574|ENST00000256996|DDB2'] 60175 11710 LGPAPTLQ True PC9_epitope_Rep6 795.4490538146299 795.44794993586 56.188 2 -0.6164097518723043 0.1842712502943254 1.0 ['ENST00000391694.4_1_19:58991128-58991158:+|nuORF'] 59517 11233 LFRTEPMAWNE True PC9_epitope_Rep1 1392.6496211793199 1392.64798490379 48.087 3 -0.6164194654011618 0.1842712502943254 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 41274 5429 HVNVAGLK True NCI_RA007_Epitope_Rep2 836.4868363056798 836.48572993586 25.736 2 -0.6165479648447867 0.18431544909427683 1.0 ['nc|ENSG844|Q9WJR5|ERVK-19_pol'] 43938 17126 IIDHVSDSF True PC9_epitope_Rep4 1031.49237517859 1031.4912699358601 73.877 2 -0.6166269379868448 0.18436955532185406 1.0 ['ENSG00000183230|ENST00000433211|CTNNA3', 'nc|ENSG00000183230|Q9UI47-2|CTNNA3'] 30202 13974 FYRKFRFWNWG True PC9_epitope_Rep2 1605.7993370778497 1605.7982499358602 59.025 2 -0.6166854386146734 0.18436955532185406 1.0 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 45300 20170 IPYFIWTT True H1975_Epitope_Rep3 1039.5378688190299 1039.53676993586 84.373 2 -0.6166859184831452 0.18436955532185406 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'ENST00000496526.5_1_3:9854990-9859595:+|nuORF'] 4931 12049 ALGALPALTF True NCI_RA007_Epitope_Rep4 972.56441792004 972.56332993586 53.347 2 -0.6166976280317541 0.18437946351493462 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'ENST00000524486.5_1_11:803168-803522:-|nuORF'] 36878 18632 GVLLRRYSR True NCI_RA007_Epitope_Rep5 1118.66726027914 1118.66667496793 78.482 1 -0.6167659025324782 0.18437946351493462 1.0 ['GPX1|p.P175L|1|0.2|ENSG00000233276|chr3:49357476-49357476|G/A|missense_variant'] 124157 8115 VGSSQFKTI True PC9_epitope_Rep1 965.51819600361 965.51708993586 36.041 2 -0.6168419682212165 0.1843905960639066 1.0 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 82017 15071 PLVNVAPE True PC9_epitope_Rep5 837.45961849833 837.45852993586 62.977 2 -0.6168432866407604 0.1843905960639066 1.0 ['ENSG00000206107|ENST00000382835|KRTAP27-1'] 96953 13104 SAVVVQLSV True PC9_epitope_Rep1 900.5280324113199 900.52692993586 55.272 2 -0.6168677926022487 0.1843905960639066 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 106521 11177 STLPKSLSL True PC9_epitope_Rep3 944.55424715916 944.55314993586 47.997 2 -0.6168779041651995 0.1843905960639066 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 93599 9378 RQPDSGISSI True PC9_epitope_Rep3 1058.5356369729 1058.53452993586 41.012 2 -0.6168847740390909 0.1843905960639066 1.0 ['ENSG00000163902|ENST00000296255|RPN1'] 38811 5201 HGYTLSNSK True NCI_RA007_Epitope_Rep1 1005.48795850449 1005.48686993586 24.314 2 -0.6168923888286634 0.1843905960639066 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 70676 20337 LWHVGSREML True PC9_epitope_Rep4 1226.62301250866 1226.6213549037902 86.37 3 -0.6168965514898553 0.1843905960639066 1.0 ['ENST00000542244.5_1_12:31237807-31242486:+|nuORF'] 68746 23125 LTLDTSLIP True PC9_epitope_Rep4 971.55391280599 971.5533649679301 97.169 1 -0.6169125808272777 0.18440339616127058 1.0 ['ENSG00000164082|ENST00000395052|GRM2', 'ENST00000296479.9_1_3:51747995-51752125:+|nuORF'] 31402 7094 GDVVPSVPR True NCI_RA007_Epitope_Rep2 924.5028802926399 924.50178993586 32.217 2 -0.6169314731069482 0.18441330173726087 1.0 ['ENST00000600125.5_1_19:58238867-58238939:-|nuORF'] 132596 4420 VVEYECRPGYR True NCI_RA007_Epitope_Rep2 1369.6448701520499 1369.64323490379 21.826 3 -0.6169703132585822 0.18441330173726087 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 61668 25895 LKRRKRIARRL True PC9_epitope_Rep1 1464.9953515457998 1464.99370490379 104.72 3 -0.6170179124538941 0.18442610087567873 1.0 ['nc|ENSG00000171320|Q56NI9-2|ESCO2', 'ENSG00000171320|ENST00000305188|ESCO2'] 10963 9713 DAINKNQV True PC9_epitope_Rep2 900.46649478392 900.46538993586 42.698 2 -0.6170422476948525 0.18443889961238485 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'DMKN|p.S385Afs*89|1|0.23|ENSG00000161249|chr19:35502869-35502869|G/-|frameshift_variant', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 53504 22199 KRKKRKKKRQK True PC9_epitope_Rep3 1511.0372163577797 1511.0361099358602 90.674 2 -0.6170533237437742 0.18445169794739816 1.0 ['ENST00000357337.10_1_13:77671591-77671720:-|nuORF'] 57298 7111 LEAAGDKF True PC9_epitope_Rep1 849.42323298961 849.42212993586 32.162 2 -0.6171836029717492 0.1844743986065561 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 103504 4916 SPQRIASAV True PC9_epitope_Rep4 927.5137793295098 927.51268993586 25.504 2 -0.6172287277108737 0.1844743986065561 1.0 ['nc|ENSG00000112139|Q8NFP4-2|MDGA1', 'ENSG00000112139|ENST00000434837|MDGA1'] 83172 11565 PSSPYPSHSP True PC9_epitope_Rep4 1054.4719740871801 1054.47086993586 52.245 2 -0.617250821593708 0.1844743986065561 1.0 ['ENST00000555997.1_1_14:69256147-69256228:-|nuORF'] 45593 7435 IQVLELPG True H1975_Epitope_Rep3 867.5065686907499 867.50546993586 33.577 2 -0.6173362367385623 0.18450288727090133 1.0 ['ENSG00000166450|ENST00000389286|PRTG', 'PRTG|p.R972Tfs*3|1|0.55|ENSG00000166450|chr15:55627021-55627022|-/T|frameshift_variant'] 64221 21830 LPGTLTLVT True PC9_epitope_Rep5 913.54843350273 913.54788496793 89.001 1 -0.6174648001038732 0.18454248776201831 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF', 'ENST00000561695.1_1_16:2128976-2129273:+|nuORF'] 18969 9597 ELELEEELY True H1975_Epitope_Rep3 1165.53905058749 1165.53794993586 41.928 2 -0.6174735883817175 0.18454248776201831 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1', 'ENST00000521877.1_1_16:88782015-88782615:-|nuORF', 'ENST00000484567.5_1_16:88782015-88783673:-|nuORF'] 13323 11841 DLVDRTRSWLY True H1975_Epitope_Rep3 1422.7255630009 1422.72446993586 50.694 2 -0.6175017149338756 0.18454248776201831 1.0 ['ENST00000504260.5_1_17:47783523-47784713:-|nuORF', 'ENST00000508607.1_1_17:47783523-47785148:-|nuORF'] 110058 13416 TELGFLTKLQE True NCI_RA007_Epitope_Rep2 1277.68671788069 1277.68562993586 56.826 2 -0.6175584413006509 0.18454248776201831 1.0 ['ENSG00000079435|ENST00000244289|LIPE'] 11544 10505 DFRCNCVPIP True H1975_Epitope_Rep3 1162.5263352425 1162.5252299358601 45.471 2 -0.6175810399090388 0.18454248776201831 1.0 ['ENSG00000196664|ENST00000380659|TLR7'] 25514 6714 FEGYDSIDSPK True NCI_RA007_Epitope_Rep1 1256.55609763396 1256.55445490379 30.125 3 -0.6175882844568285 0.18454248776201831 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 16875 15184 EFHIVQVS True PC9_epitope_Rep1 957.4919812557699 957.49088993586 63.227 2 -0.6175923730275313 0.18454248776201831 1.0 ['nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8', 'ENSG00000153339|ENST00000283351|TRAPPC8'] 122000 16940 VFVFGPDK True PC9_epitope_Rep3 907.4803539429098 907.47924993586 70.317 2 -0.6176013125861164 0.18454248776201831 1.0 ['ENSG00000117592|ENST00000340385|PRDX6'] 61003 17352 LIEKVSLIIF True PC9_epitope_Rep5 1173.7372969015698 1173.73564490379 71.742 3 -0.6176985508878434 0.18454949089254616 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 80592 6363 PGQDEWIK True NCI_RA007_Epitope_Rep3 971.47124581119 971.47014993586 32.03 2 -0.6177135407676551 0.18454949089254616 1.0 ['ENST00000532402.5_1_11:62392602-62392905:-|nuORF'] 25427 4242 FEDPQRREVA True H1975_Epitope_Rep3 1245.6101988954902 1245.60856490379 21.434 3 -0.6177208733807905 0.18454949089254616 1.0 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 23420 15317 EVSTDSFP True PC9_epitope_Rep3 880.3814277472799 880.38032993586 64.068 2 -0.6177867619022047 0.184566390562249 1.0 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'MAP7D3|p.H864Qfs*2|1|0.07|ENSG00000129680|chrX:136219469-136219470|-/T|frameshift_variant', 'ENSG00000129680|ENST00000316077|MAP7D3'] 102030 11755 SLQSVRSSF True PC9_epitope_Rep4 1009.51925863277 1009.51816993586 52.977 2 -0.6177957699603116 0.184566390562249 1.0 ['ENSG00000129646|ENST00000680821|QRICH2'] 24508 16979 FAEVNDDYITW True NCI_RA007_Epitope_Rep1 1371.5982967991097 1371.5971899358601 70.171 2 -0.6178061462598472 0.184566390562249 1.0 ['TGM6|p.A397D|1|0.16|ENSG00000166948|chr20:2403677-2403677|C/A|missense_variant'] 89934 22982 RCWTWPWREWP True PC9_epitope_Rep1 1601.7350225691296 1601.73337490379 93.197 3 -0.6178064427772026 0.184566390562249 1.0 ['ENST00000374279.3_1_9:114659094-114659565:+|nuORF'] 66590 11656 LSIQNYHTF True NCI_RA007_Epitope_Rep4 1121.55055876105 1121.54946993586 51.793 2 -0.6178234031992118 0.184566390562249 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 130367 9141 VSKTHAVI True PC9_epitope_Rep1 853.5021520166499 853.50104993586 40.011 2 -0.6178362491058719 0.18457628713958524 1.0 ['ENSG00000141295|ENST00000290216|SCRN2', 'ENST00000581546.1_1_17:45917528-45917771:-|nuORF', 'ENST00000578840.5_1_17:45917528-45918556:-|nuORF', 'ENST00000580428.1_1_17:45917528-45918633:-|nuORF', 'nc|ENSG00000141295|Q96FV2-2|SCRN2'] 45999 2613 ISFQNHRAVP True NCI_RA007_Epitope_Rep5 1167.6148903531098 1167.61324490379 14.745 3 -0.6178439150797447 0.18457628713958524 1.0 ['LGALS9C|p.P150H|1|0.33|ENSG00000171916|chr17:18488945-18488945|C/A|missense_variant'] 39770 20941 HLWHPRRHYLL True PC9_epitope_Rep3 1526.8371195688999 1526.83602993586 85.828 2 -0.6179799522626584 0.18460186986258392 1.0 ['ENST00000448759.1_1_1:43352960-43353698:-|nuORF'] 132670 17072 VVGGIYGV True PC9_epitope_Rep2 762.42759009406 762.4270449679301 70.919 1 -0.6179883731114926 0.18460186986258392 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 13922 4976 DQYFTRWYKAD True NCI_RA007_Epitope_Rep1 1491.67827845531 1491.67663490379 23.437 3 -0.6180558068828508 0.18463034714270027 1.0 ['ENST00000510179.1_1_13:46844256-46844595:+|nuORF'] 121127 13011 VERRELLP True PC9_epitope_Rep6 1010.5872786229398 1010.58618993586 61.628 2 -0.6181698211261679 0.18467161299430598 1.0 ['nc|ENSG00000158813|Q92838-9|EDA', 'nc|ENSG00000158813|Q92838-3|EDA', 'ENSG00000158813|ENST00000374552|EDA', 'nc|ENSG00000158813|Q92838-2|EDA', 'nc|ENSG00000158813|Q92838-6|EDA', 'nc|ENSG00000158813|Q92838-8|EDA', 'nc|ENSG00000158813|Q92838-5|EDA', 'ENST00000502251.5_1_X:68836137-68840769:+|nuORF', 'nc|ENSG00000158813|Q92838-7|EDA', 'ENST00000374548.5_1_X:68836137-69177014:+|nuORF'] 67640 5505 LSVQQQAAQP True H1975_Epitope_Rep3 1068.55637241748 1068.55526993586 26.227 2 -0.6181720656941686 0.18467161299430598 1.0 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2', 'ENST00000604759.1_1_14:39684672-39685536:+|nuORF'] 99712 11232 SIHLYAWAP True PC9_epitope_Rep2 1056.53926580136 1056.5381699358602 48.531 2 -0.6182067588127947 0.18468440205797465 1.0 ['nc|ENSG00000123572|Q7Z2Y5-2|NRK', 'ENSG00000123572|ENST00000243300|NRK'] 94216 23611 RRPRRKRAHPA True PC9_epitope_Rep3 1399.84974994127 1399.84810490379 96.105 3 -0.6182415929547024 0.18469429369137622 1.0 ['ENST00000460758.1_1_3:48511100-48514492:-|nuORF'] 103063 11264 SPGIHFSL True PC9_epitope_Rep4 856.44430278736 856.44320993586 51.102 2 -0.6182441764062859 0.18469429369137622 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|16|1|sense'] 13773 13469 DQGRRLLWR True NCI_RA007_Epitope_Rep1 1198.6683229082998 1198.66777496793 56.394 1 -0.6183276804703861 0.18472276684181632 1.0 ['ENST00000371936.5_1_X:114252225-114253471:-|nuORF'] 4432 12160 AIRLELQGPR True PC9_epitope_Rep3 1151.6774906096698 1151.67583490379 51.81 3 -0.6183505483920542 0.18475123909906518 1.0 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 78970 14824 PAIHKSIAI True PC9_epitope_Rep5 948.5756513100799 948.57454993586 62.02 2 -0.6183972881345565 0.18477971046316483 1.0 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1'] 141615 11841 YTRQERYRARP True PC9_epitope_Rep5 1494.7803925384198 1494.77875490379 50.546 3 -0.6184851718951296 0.1848081809341573 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 75448 7469 NKALEGDKTK True NCI_RA007_Epitope_Rep1 1102.59823722946 1102.5971499358602 33.043 2 -0.6185210997221581 0.18482096645179505 1.0 ['ENSG00000186675|ENST00000373359|MAGEE2'] 120713 11608 VEKIQEIRYRS True H1975_Epitope_Rep1 1419.78341223019 1419.7823099358602 49.64 2 -0.6185742870207719 0.18483375156838144 1.0 ['ENST00000509092.5_1_4:55124935-55146696:+|nuORF', 'nc|ENSG00000134853|P16234-3|PDGFRA', 'ENSG00000134853|ENST00000257290|PDGFRA'] 6989 15608 AQLHWILV True NCI_RA007_Epitope_Rep5 978.5650866263799 978.56398993586 66.745 2 -0.6186383177773043 0.1848750039208306 1.0 ['ENSG00000112309|ENST00000230053|B3GAT2', 'B3GAT2|p.D118Y|1|0.14|ENSG00000112309|chr6:70956078-70956078|C/A|missense_variant'] 56348 8262 LDDFEDKVFYR True H1975_Epitope_Rep3 1445.6826951294097 1445.68158993586 36.766 2 -0.6186574825394123 0.1848750039208306 1.0 ['ENSG00000119922|ENST00000371826|IFIT2'] 89912 8066 RCPCCASV True PC9_epitope_Rep3 837.3295500122499 837.32844993586 36.002 2 -0.6187001410400076 0.18491915374119788 1.0 ['ENST00000609516.1_1_1:38148756-38148999:-|nuORF'] 10559 6757 CMDMRKRFCYR True H1975_Epitope_Rep1 1507.6668856332699 1507.6652249037902 31.03 3 -0.6187441728063751 0.18492323615663275 1.0 ['FBN2|p.S1738R|1|0.29|ENSG00000138829|chr5:128309386-128309386|G/T|missense_variant'] 133923 14444 VYIHVESKL True PC9_epitope_Rep2 1086.60734536118 1086.6062499358602 60.827 2 -0.6187596113970802 0.18492323615663275 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 100578 15837 SLCHSRTRV True PC9_epitope_Rep4 1057.54509654113 1057.54398993586 68.84 2 -0.6187689851035092 0.18492323615663275 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 101622 9401 SLLRENRRQQ True PC9_epitope_Rep4 1298.7167296527 1298.71562993586 43.77 2 -0.6187888030351277 0.18492323615663275 1.0 ['nc|ENSG00000174500|Q8N6F7-3|GCSAM', 'ENSG00000174500|ENST00000308910|GCSAM'] 82981 14510 PSFHVYVL True PC9_epitope_Rep5 960.50690304392 960.50580993586 60.812 2 -0.6188303091741627 0.18493311797268266 1.0 ['ENSG00000182308|ENST00000333141|DCAF4L1'] 36714 11763 GVIYGSYSVI True PC9_epitope_Rep3 1056.54916177872 1056.5480699358602 50.265 2 -0.6188645045742902 0.18493311797268266 1.0 ['ADGRB3|p.S45I|1|0.41|ENSG00000135298|chr6:68638809-68638809|G/T|missense_variant'] 101950 7368 SLQDTKPA True PC9_epitope_Rep5 858.4446967101799 858.44358993586 33.298 2 -0.6189233868772975 0.18495868027786924 1.0 ['nc|ENSG00000162891|Q9NYY1-2|IL20', 'ENSG00000162891|ENST00000367098|IL20'] 83083 13991 PSLWVILERY True H1975_Epitope_Rep3 1274.7023083751799 1274.70120993586 59.135 2 -0.6189354233264591 0.18495868027786924 1.0 ['ENST00000465567.1_1_17:15930614-15930833:+|nuORF'] 121215 11138 VESSTCQTSCY True H1975_Epitope_Rep1 1206.4532894415402 1206.4521899358601 47.809 2 -0.6189600833764096 0.18496856036253587 1.0 ['KRTAP13-1|p.P75T|1|0.43|ENSG00000198390|chr21:30396309-30396309|C/A|missense_variant'] 129512 3 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 0.015673 3 -0.6189601129033092 0.18496856036253587 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'DST|p.K871Sfs*13|1|0.27|ENSG00000151914|chr6:56635652-56635652|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST', 'DST|p.K404Nfs*7|1|0.28|ENSG00000151914|chr6:56645922-56645922|C/-|frameshift_variant'] 110649 8162 TFWKKYRTFWK True H1975_Epitope_Rep1 1589.8507039443696 1589.84905490379 36.336 3 -0.6190108291367517 0.18502838147207326 1.0 ['ENSG00000123171|ENST00000242819|CCDC70'] 128936 13771 VQIEHISSL True PC9_epitope_Rep2 1024.5553097883198 1024.5542099358602 58.256 2 -0.6190318228650551 0.18507252058016463 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 71100 20880 LYLILKFQN True PC9_epitope_Rep3 1150.6750309981799 1150.67392993586 85.589 2 -0.6190386831539605 0.18508239647521835 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 82876 20565 PRVKKCLIC True NCI_RA007_Epitope_Rep2 1058.60927702082 1058.6081699358601 85.066 2 -0.6190671801637794 0.18508239647521835 1.0 ['MIB1|p.Q879Hfs*19|1|0.14|ENSG00000101752|chr18:21853189-21853190|-/CATCTTTATAT|frameshift_variant', 'ENSG00000101752|ENST00000261537|MIB1'] 106220 13057 STEDLHVTW True H1975_Epitope_Rep1 1086.49818883502 1086.49708993586 55.31 2 -0.6191551081055194 0.1850922717508898 1.0 ['nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.F1269Kfs*86|1|0.06|ENSG00000127329|chr12:70559598-70559599|-/CCAATTTT|frameshift_variant'] 70197 15183 LVQDTGLTI True PC9_epitope_Rep4 958.53351171458 958.5329649679301 66.326 1 -0.6191600021023476 0.1850922717508898 1.0 ['nc|ENSG00000188013|A8K0S8|MEIS3P2'] 136976 20558 YAIEVDPVL True PC9_epitope_Rep4 1017.5382627418498 1017.53767496793 87.227 1 -0.6192004115058087 0.1851335037080008 1.0 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 42368 13602 IEASDLSSLLE True PC9_epitope_Rep6 1175.59214878951 1175.5910499358602 64.073 2 -0.6192105219780718 0.1851335037080008 1.0 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENST00000462933.1_1_10:103902785-103904065:+|nuORF'] 10873 7537 CWGPSNTCAGP True PC9_epitope_Rep1 1091.41645044035 1091.4153499358601 33.809 2 -0.6192788410512194 0.1851433767618331 1.0 ['ENST00000300209.12_1_12:58174160-58174295:+|nuORF'] 109245 5705 TASELLLDR True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 29.416 2 -0.6192846557023161 0.1851433767618331 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 13536 8786 DNVGFNVK True PC9_epitope_Rep2 891.44503106335 891.44392993586 39.149 2 -0.6193549800027944 0.18517182992600026 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'ENSG00000101210|ENST00000217182|EEF1A2'] 29093 18120 FTIRDLQRL True PC9_epitope_Rep4 1160.6665915728 1160.66494490379 77.763 3 -0.619368069081146 0.1851758951526933 1.0 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 16672 13805 EERCEGLI True PC9_epitope_Rep5 947.4382314307499 947.43712993586 58.121 2 -0.6193744736989127 0.1851758951526933 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 15664 3358 EATLSWLANCK True NCI_RA007_Epitope_Rep2 1234.60160835774 1234.59997490379 17.721 3 -0.6193886712369496 0.1851758951526933 1.0 ['ENSG00000073910|ENST00000542859|FRY'] 37634 11642 GVWGRQRWL True PC9_epitope_Rep3 1156.62539546716 1156.62373490379 49.796 3 -0.6194282570373497 0.1851758951526933 1.0 ['ENST00000486098.1_1_21:44482232-44483209:-|nuORF'] 44804 9958 IMSTAWDL True PC9_epitope_Rep2 935.44225418203 935.44114993586 43.634 2 -0.6194646895044916 0.1852113117632305 1.0 ['nc|ENSG00000152763|Q5VTH9-2|DNAI4', 'ENSG00000152763|ENST00000371026|DNAI4', 'nc|ENSG00000152763|Q5VTH9-3|DNAI4'] 135621 22990 WLKRRIWRMP True PC9_epitope_Rep2 1440.82886338432 1440.82776993586 93.925 2 -0.6194704988658059 0.1852113117632305 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 92649 15282 RNKREFRRNLP True PC9_epitope_Rep1 1484.8436615013197 1484.8425699358602 63.604 2 -0.6194805560495292 0.1852113117632305 1.0 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 129990 25554 VRVVVLVT True PC9_epitope_Rep1 883.5854877177899 883.58493496793 103.3 1 -0.6194848798104893 0.1852113117632305 1.0 ['ENST00000396821.7_1_22:38882394-38883916:-|nuORF'] 28690 7106 FSQPTLVP True NCI_RA007_Epitope_Rep1 887.4752685624699 887.47416993586 31.633 2 -0.6195441308351772 0.1852240841471635 1.0 ['ENST00000325875.7_1_9:86595761-86614663:+|nuORF'] 1777 7273 AEGYKGHVGVP True H1975_Epitope_Rep3 1112.5614577979197 1112.56036993586 32.95 2 -0.6195701936196725 0.1852368561306706 1.0 ['ENSG00000171502|ENST00000370571|COL24A1', 'nc|ENSG00000171502|Q17RW2-2|COL24A1'] 20985 12608 EQQRRYHEEKE True NCI_RA007_Epitope_Rep2 1530.7175174983402 1530.71642993586 53.656 2 -0.6196802439352863 0.1853750293910181 1.0 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF'] 77473 11829 NSYYSSPA True PC9_epitope_Rep5 887.36611203631 887.36500993586 50.498 2 -0.6197282112499637 0.1853877986080632 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 112200 8204 TKHDQREYDDQ True NCI_RA007_Epitope_Rep5 1433.61713475073 1433.61602993586 38.236 2 -0.6197843919386453 0.18540056742480054 1.0 ['ENSG00000180611|ENST00000392452|MB21D2'] 33431 14474 GLAFHRHKYSP True NCI_RA007_Epitope_Rep1 1311.68363861927 1311.6825499358602 60.347 2 -0.6198284869461642 0.18544468478635695 1.0 ['nc|ENSG00000167600|Q96SQ9-2|CYP2S1', 'ENST00000310054.8_1_19:41712417-41712672:+|nuORF'] 6549 11414 APTQPFPPAP True PC9_epitope_Rep2 1021.5232813840498 1021.52218993586 49.226 2 -0.6198601821844 0.18546845124282982 1.0 ['GREB1|p.P483T|1|0.55|ENSG00000196208|chr2:11592877-11592877|C/A|missense_variant'] 140565 10145 YRPQYGYWVIG True PC9_epitope_Rep3 1400.6877209401998 1400.68662993586 43.976 2 -0.6199048865519311 0.18546845124282982 1.0 ['nc|ENSG00000132274|Q8IYM9-2|TRIM22', 'ENSG00000132274|ENST00000379965|TRIM22'] 43557 6078 IGRRPFTK True NCI_RA007_Epitope_Rep5 973.5821336728499 973.58102993586 30.061 2 -0.6199185195830416 0.18546845124282982 1.0 ['nc|ENSG00000091140|P09622-2|DLD', 'ENSG00000091140|ENST00000205402|DLD', 'nc|ENSG00000091140|P09622-3|DLD'] 99476 13327 SICVMLVVI True PC9_epitope_Rep1 975.5496964560299 975.54858993586 56.122 2 -0.6199241194192653 0.18546845124282982 1.0 ['ENSG00000228594|ENST00000422725|FNDC10'] 21097 5610 EQYRVVQEENQ True H1975_Epitope_Rep3 1420.65827128672 1420.65661490379 26.617 3 -0.6199372278564803 0.18546845124282982 1.0 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'ERC1-VWF|2|fusion', 'ERC1-VWF|1|fusion'] 68457 14109 LTFEIYKV True PC9_epitope_Rep3 1011.5640835668698 1011.56298993586 59.356 2 -0.6199523367924609 0.18546845124282982 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 137905 4708 YEWWFRWRLDR True NCI_RA007_Epitope_Rep2 1711.8371791385496 1711.83497987172 22.94 4 -0.6199612826011323 0.18546845124282982 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 44284 15398 ILCWYIYLVWY True H1975_Epitope_Rep1 1533.77303078729 1533.77192993586 64.498 2 -0.6199633903915099 0.18546845124282982 1.0 ['ENST00000334955.12_1_7:77409008-77409110:+|nuORF'] 121937 7570 VFSHAAELQP True NCI_RA007_Epitope_Rep3 1097.5505587610498 1097.54946993586 36.904 2 -0.6200038501287968 0.18549398194583752 1.0 ['ENSG00000167094|ENST00000373289|TTC16'] 18301 15429 EIRVHYIL True PC9_epitope_Rep5 1041.59711503065 1041.5960099358601 64.357 2 -0.62001304827066 0.18549398194583752 1.0 ['CON__ENSEMBL:ENSBTAP00000037665'] 100919 4708 SLFDSHDSMYP True H1975_Epitope_Rep3 1297.52850298713 1297.52686490379 23.234 3 -0.6200334707235223 0.18550674669717437 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 15458 7276 EALLERESA True H1975_Epitope_Rep2 1016.51383889916 1016.51274993586 32.924 2 -0.6200922507000975 0.185519511048425 1.0 ['ENSG00000138031|ENST00000679454|ADCY3', 'nc|ENSG00000138031|O60266-2|ADCY3'] 124655 6352 VGYAVHDNWI True NCI_RA007_Epitope_Rep3 1172.5614577979197 1172.55982490379 31.989 3 -0.6201326805997529 0.18552936751708143 1.0 ['ENSG00000157184|ENST00000371486|CPT2'] 92961 24364 RPIQLKIQDEK True PC9_epitope_Rep1 1366.7932486378998 1366.79161490379 98.548 3 -0.6201424253300823 0.18552936751708143 1.0 ['nc|ENSG00000169435|Q6ZTQ3-4|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3-3|RASSF6', 'ENSG00000169435|ENST00000307439|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3|RASSF6'] 91587 23602 RIKRLEELEAK True PC9_epitope_Rep4 1383.8197977389098 1383.81814490379 99.093 3 -0.6201974538317336 0.18558623499545554 1.0 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 108819 13964 SYVKDLVVQR True PC9_epitope_Rep4 1205.6768219033297 1205.6751749037899 61.615 3 -0.6202004408000762 0.18558623499545554 1.0 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 67362 15202 LSSIAKKPQL True PC9_epitope_Rep6 1083.6651945904698 1083.6640899358601 70.565 2 -0.6202566261477508 0.18559899710099506 1.0 ['ENSG00000158201|ENST00000289119|ABHD3', 'ENST00000577928.5_1_18:19263865-19284533:-|nuORF', 'ENST00000579875.5_1_18:19244061-19284599:-|nuORF', 'ENST00000579982.1_1_18:19282269-19284734:-|nuORF'] 135965 23784 WQGRRLAL True NCI_RA007_Epitope_Rep3 998.5773826455799 998.57628993586 103.08 2 -0.6202998852766163 0.18562742885796665 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 91915 22004 RKLLLQLKQEL True PC9_epitope_Rep6 1380.88166971948 1380.8800349037901 97.56 3 -0.6203569482619065 0.18568719933560024 1.0 ['nc|ENSG00000183323|Q86Z20-2|CCDC125', 'ENSG00000183323|ENST00000396496|CCDC125'] 55666 9321 LALCIMLI True NCI_RA007_Epitope_Rep3 888.51766805176 888.51656993586 43.764 2 -0.6203953862517496 0.18571562881945533 1.0 ['ENSG00000108576|ENST00000650711|SLC6A4', 'nc|ENSG00000108576|P31645-2|SLC6A4'] 110007 4825 TEIQKDQREE True H1975_Epitope_Rep2 1274.61025846514 1274.60916993586 23.65 2 -0.6205515402168079 0.18574114697586963 1.0 ['ENSG00000147183|ENST00000276127|CPXCR1'] 129994 25641 VRVVVLVT True PC9_epitope_Rep5 883.5854877177899 883.58493496793 103.97 1 -0.6205590245366415 0.18574114697586963 1.0 ['ENST00000396821.7_1_22:38882394-38883916:-|nuORF'] 37321 18006 GVSDVDYSL True PC9_epitope_Rep3 953.43419159613 953.43308993586 74.464 2 -0.6206153944923849 0.18576957427805896 1.0 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 11620 6576 DGHSPGEQQK True NCI_RA007_Epitope_Rep4 1081.4788503727702 1081.4777499358602 31.915 2 -0.6206578810596209 0.18578233211118422 1.0 ['CON__Q3KUS7'] 20765 7883 EQFYYLTQNKK True NCI_RA007_Epitope_Rep1 1460.7299796749996 1460.72833490379 34.656 3 -0.6207620139131027 0.18580784657808974 1.0 ['ENSG00000153790|ENST00000283905|C7orf31'] 56347 8117 LDDFEDKVFYR True H1975_Epitope_Rep1 1445.6826951294097 1445.68158993586 36.166 2 -0.6207935235747872 0.18580784657808974 1.0 ['ENSG00000119922|ENST00000371826|IFIT2'] 85976 8670 QHISLLVKQVQ True NCI_RA007_Epitope_Rep1 1291.76122023363 1291.75957490379 37.728 3 -0.6208188149600135 0.18581478057875195 1.0 ['nc|ENSG00000198929|O75052-2|NOS1AP', 'F11R-NOS1AP|1|fusion', 'nc|ENSG00000198929|O75052-3|NOS1AP', 'ENSG00000198929|ENST00000361897|NOS1AP'] 32539 26316 GGGGGCCCG True H1975_Epitope_Rep3 669.16690136125 669.16635496793 109.73 1 -0.6208264487005344 0.18581478057875195 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 123196 22139 VGLCVATVGIA True PC9_epitope_Rep1 1001.5579526406099 1001.55684993586 89.97 2 -0.6208343131808898 0.18581478057875195 1.0 ['ENSG00000164038|ENST00000394785|SLC9B2'] 32536 26315 GGGGGCCCG True H1975_Epitope_Rep1 669.16690136125 669.16635496793 109.34 1 -0.6209249771390901 0.18587162575005092 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 62100 11794 LLEDGTEL True PC9_epitope_Rep1 888.44402800384 888.44292993586 50.235 2 -0.620985616354681 0.18587162575005092 1.0 ['ENSG00000128833|ENST00000261839|MYO5C', 'nc|ENSG00000128833|Q9NQX4-2|MYO5C'] 117351 23941 TVPDLLLPLV True PC9_epitope_Rep5 1078.66379760814 1078.6627099358602 97.071 2 -0.6209981463475549 0.18588438038539873 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 83630 7342 PVDPQAGP True H1975_Epitope_Rep2 779.38136817763 779.38026993586 33.182 2 -0.6210833865075588 0.18589422233362576 1.0 ['ENSG00000167074|ENST00000266304|TEF'] 71175 17055 LYNDRMFRI True PC9_epitope_Rep1 1226.62301250866 1226.6213549037902 70.427 3 -0.6210856802810477 0.18589422233362576 1.0 ['ENST00000518876.1_1_8:97243285-97244208:-|nuORF', 'ENST00000519322.1_1_8:97243965-97247767:-|nuORF', 'ENSG00000156467|ENST00000287022|UQCRB', 'nc|ENSG00000156467|P14927-2|UQCRB'] 14434 5268 DTEDINKPKK True H1975_Epitope_Rep2 1186.6193665968597 1186.61773490379 25.331 3 -0.6210971550119995 0.18590697601554054 1.0 ['ENSG00000173145|ENST00000371361|NOC3L'] 44004 19274 IIGFSTSVTAW True NCI_RA007_Epitope_Rep1 1180.61282466444 1180.61172993586 79.129 2 -0.6211221012934857 0.18591972929786635 1.0 ['MAOA|p.L514Wfs*71|1|0.05|ENSG00000189221|chrX:43744467-43744467|C/-|frameshift_variant'] 110060 4484 TELIFYIEMDP True NCI_RA007_Epitope_Rep2 1369.6475554906497 1369.6464499358601 22.073 2 -0.6212448485940004 0.1859481475679486 1.0 ['nc|ENSG00000117461|Q92569-2|PIK3R3', 'ENSG00000117461|ENST00000262741|PIK3R3', 'nc|ENSG00000117461|Q92569-3|PIK3R3'] 24247 17642 EYSNTRAYYF True PC9_epitope_Rep6 1312.5724164044398 1312.5713099358602 80.498 2 -0.6212652477594327 0.18596089980575223 1.0 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 33553 13695 GLELERSELFK True NCI_RA007_Epitope_Rep1 1319.7085159544297 1319.7074099358601 57.284 2 -0.6212972684343973 0.1859736516440309 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 12670 9334 DLDNNRPLE True NCI_RA007_Epitope_Rep1 1084.5149015283198 1084.51380993586 40.301 2 -0.6213303895779186 0.18598348971631762 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'ENST00000497509.1_1_22:46926386-46930076:-|nuORF'] 86653 6738 QLGSLSKYAE True PC9_epitope_Rep5 1094.5607890915799 1094.5596899358602 30.889 2 -0.6213321525406289 0.18598348971631762 1.0 ['ENSG00000158195|ENST00000618852|WASF2', 'nc|ENSG00000158195|Q9Y6W5-2|WASF2'] 124051 21966 VGSITETLVQ True H1975_Epitope_Rep1 1045.5655401188499 1045.56444993586 91.371 2 -0.6213502853723512 0.18599624060150377 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 98855 8479 SGTSDPYVKI True NCI_RA007_Epitope_Rep2 1065.5342399905699 1065.5331499358601 37.625 2 -0.6213690544020658 0.18602465500227128 1.0 ['ENSG00000170743|ENST00000318881|SYT9'] 84353 17426 PYWKKRFLHMK True PC9_epitope_Rep6 1532.8438447421197 1532.84218490379 79.644 3 -0.6213831269914901 0.18603740484320666 1.0 ['ENST00000476943.1_1_13:49956911-49975339:-|nuORF'] 113341 13140 TLRRFQPSP True PC9_epitope_Rep2 1100.6090766966797 1100.6079699358602 55.815 2 -0.6214281227142642 0.18605015428472974 1.0 ['ENST00000471480.6_1_22:30682838-30683547:-|nuORF'] 11328 9871 DELNDMKDY True H1975_Epitope_Rep1 1141.45975472097 1141.4586499358602 42.902 2 -0.6215241730177118 0.18605707483632491 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'nc|ENSG00000260916|Q9ULG6-3|CCPG1'] 9157 16120 AVLDRNVAI True PC9_epitope_Rep4 969.5607295219299 969.55962993586 69.945 2 -0.6215267165432641 0.18605707483632491 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 137694 21061 YEKKPKKQKRR True H1975_Epitope_Rep1 1487.9048647755496 1487.90320490379 87.478 3 -0.6215311417947036 0.18605707483632491 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 46920 10788 ITNGTLTGV True PC9_epitope_Rep1 874.47599683846 874.47488993586 46.384 2 -0.6215377840744669 0.18606982317101822 1.0 ['nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2'] 41369 13601 HYAALAHYF True PC9_epitope_Rep4 1091.51886470995 1091.51776993586 60.208 2 -0.6215686671129678 0.18608257110637766 1.0 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF'] 112608 14605 TLESSILLQ True NCI_RA007_Epitope_Rep3 1002.5597264624198 1002.55862993586 64.791 2 -0.6216165457593728 0.18609531864242196 1.0 ['ENSG00000114999|ENST00000233336|TTL', 'ENST00000476615.1_1_2:113258880-113278003:+|nuORF'] 45870 5134 ISDRRICAS True H1975_Epitope_Rep3 1019.5182130869499 1019.51710993586 24.852 2 -0.6216526198015412 0.18610515105479947 1.0 ['ENSG00000147113|ENST00000398000|DIPK2B', 'nc|ENSG00000147113|Q9H7Y0-2|DIPK2B'] 104439 9442 SQLKKFYNQ True PC9_epitope_Rep4 1154.6084079903399 1154.60730993586 43.93 2 -0.6216766541608915 0.18610515105479947 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.L617Afs*13|1|0.14|ENSG00000151655|chr10:7734980-7735002|TCTCTAGACCACCACATTGTGAC/-|frameshift_variant'] 117325 5026 TVNPQSPLEN True NCI_RA007_Epitope_Rep3 1097.53530261973 1097.5342099358602 26.764 2 -0.6217343027356732 0.18611789763828854 1.0 ['ENST00000505365.2_1_19:35175556-35175631:+|nuORF'] 131522 8447 VTKPFSQP True H1975_Epitope_Rep3 902.48616759934 902.48506993586 37.475 2 -0.6217530829099874 0.18613064382252986 1.0 ['CON__P50448'] 33844 12274 GLPCIFQLQ True PC9_epitope_Rep1 1017.53173789277 1017.53064993586 52.068 2 -0.6218656757478704 0.18614047451256754 1.0 ['ENST00000523803.5_2_8:141900864-141937456:-|nuORF', 'ENST00000520892.5_2_8:141900864-142011029:-|nuORF', 'ENST00000523797.1_1_8:141935746-142011029:-|nuORF', 'ENST00000522684.5_2_8:141900864-142011289:-|nuORF'] 58181 10913 LEKYVKKDP True H1975_Epitope_Rep1 1118.63356010902 1118.6324699358602 46.939 2 -0.6218769867933951 0.18614047451256754 1.0 ['nc|ENSG00000144130|Q86YG4|NT5DC4', 'ENSG00000144130|ENST00000688554|NT5DC4'] 123404 11616 VGNALLNVVL True NCI_RA007_Epitope_Rep3 1010.61243074162 1010.61132993586 52.814 2 -0.6219321314294236 0.18619728455768358 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 63817 18858 LNILDPKKQ True PC9_epitope_Rep5 1067.63389446219 1067.63278993586 77.555 2 -0.6219359452970284 0.18619728455768358 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2', 'ENST00000560620.1_1_15:44806831-44810879:+|nuORF'] 68842 12618 LTLYQSNTIL True PC9_epitope_Rep4 1164.63903941228 1164.63739490379 56.374 3 -0.6219709687156716 0.18622568824579536 1.0 ['ENSG00000084207|ENST00000398606|GSTP1', 'GSTP1|p.K189Pfs*13|1|0.3|ENSG00000084207|chr11:67586505-67586506|-/CC|frameshift_variant', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'ENST00000494593.1_1_11:67352122-67352251:+|nuORF'] 13135 5286 DLRCRRRFVR True PC9_epitope_Rep3 1375.7731394133498 1375.77148490379 25.411 3 -0.6220336352877961 0.18626391694461408 1.0 ['LRBA|p.R1991C|1|0.49|ENSG00000198589|chr4:150599082-150599082|G/A|missense_variant'] 59864 23341 LGFVLAVTV True PC9_epitope_Rep1 917.5586042636098 917.55750993586 94.572 2 -0.6220562401622322 0.18626391694461408 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A', 'ATP9A|p.R519Efs*8|1|0.23|ENSG00000054793|chr20:51639456-51639456|G/-|frameshift_variant'] 70663 25669 LWHIWRERN True PC9_epitope_Rep4 1308.68397297244 1308.68233490379 108.04 3 -0.6220595767918493 0.18626391694461408 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 86531 15010 QLAYCVVQF True PC9_epitope_Rep1 1069.52665251233 1069.52554993586 62.556 2 -0.6221043874884681 0.1863178003256921 1.0 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'PPP2R5B|p.F371Sfs*17|1|0.3|ENSG00000068971|chr11:64931862-64931862|T/-|frameshift_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 58286 7221 LELTYEHF True PC9_epitope_Rep3 1050.5022115863 1050.50110993586 32.786 2 -0.6221059007975674 0.1863178003256921 1.0 ['ENSG00000126814|ENST00000261249|TRMT5'] 11539 5996 DFQELGWRDWI True NCI_RA007_Epitope_Rep2 1463.6833638357498 1463.68171490379 27.934 3 -0.6221091231073648 0.1863178003256921 1.0 ['ENST00000551553.1_1_12:57846273-57850628:+|nuORF', 'ENSG00000139269|ENST00000266646|INHBE'] 44342 17195 ILDQSEAPL True PC9_epitope_Rep4 984.5127762699999 984.51166993586 74.147 2 -0.6221583696392453 0.18634036356803985 1.0 ['TRAF6|p.V442L|1|0.46|ENSG00000175104|chr11:36490083-36490083|C/A|missense_variant'] 63755 11440 LNEISEETTIQ True PC9_epitope_Rep1 1275.61942616651 1275.6183299358602 48.881 2 -0.6221783099959218 0.18634036356803985 1.0 ['ENSG00000164118|ENST00000503780|CEP44'] 65042 25318 LQKPKKKKKKK True NCI_RA007_Epitope_Rep4 1380.9656741269598 1380.96403490379 110.38 3 -0.6221828389481024 0.18634036356803985 1.0 ['ENST00000340726.7_1_8:72273997-72274438:-|nuORF'] 27421 14271 FLYFIDII True PC9_epitope_Rep1 1042.57391997458 1042.57282993586 59.717 2 -0.6222295791695547 0.18634143286573146 1.0 ['ENST00000355773.5_1_6:74325102-74331662:-|nuORF'] 80021 16315 PFFFFFFFWRQ True NCI_RA007_Epitope_Rep1 1614.7812274022199 1614.78012993586 67.571 2 -0.6222435000063757 0.18634143286573146 1.0 ['AluSc_dup13832|chr7:33006087-33006413:-|2.242044650319211|0.4159080058002372|2.43|536.0|11|1|anti-sense'] 140460 1565 YRHRRKYF True PC9_epitope_Rep3 1224.6628436050398 1224.6617499358601 8.6192 2 -0.6222436442672649 0.18634143286573146 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 10845 18393 CTSRVRQCL True PC9_epitope_Rep4 1064.5219185684 1064.52082993586 78.813 2 -0.6222494065621336 0.18634143286573146 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|356|3|anti-sense'] 74386 16850 NESAVIVAP True PC9_epitope_Rep2 898.4759968384599 898.47544496793 70.062 1 -0.6222681958863453 0.18634143286573146 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 110467 7895 TFETRDLSRLP True H1975_Epitope_Rep2 1333.69901389989 1333.69790993586 35.314 2 -0.6222935743203715 0.18636690985377463 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|261|1|anti-sense'] 2706 6106 AETAAVTVA True NCI_RA007_Epitope_Rep3 831.43379767331 831.43270993586 31.006 2 -0.6223055778654718 0.18636690985377463 1.0 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 58915 13703 LETHEAFNI True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 57.999 2 -0.6223706536015972 0.18637672991420878 1.0 ['nc|ENSG00000166006|Q96PR1-4|KCNC2', 'nc|ENSG00000166006|Q96PR1-5|KCNC2', 'nc|ENSG00000166006|Q96PR1-3|KCNC2', 'nc|ENSG00000166006|Q96PR1-6|KCNC2', 'nc|ENSG00000166006|Q96PR1-2|KCNC2', 'ENSG00000166006|ENST00000549446|KCNC2', 'nc|ENSG00000116396|Q03721-2|KCNC4', 'ENST00000489935.1_1_1:110754121-110766653:+|nuORF', 'ENSG00000116396|ENST00000438661|KCNC4', 'nc|ENSG00000116396|Q03721|KCNC4'] 91265 27418 RGHRAMHA True PC9_epitope_Rep5 934.4667866507799 934.46568993586 112.45 2 -0.6224796100469993 0.18637672991420878 1.0 ['ENST00000256495.3_1_3:5021183-5021234:+|nuORF'] 99665 10231 SIGIFLVMTVK True NCI_RA007_Epitope_Rep1 1206.7046168743002 1206.7035099358602 43.808 2 -0.6225901360799948 0.1864207774316264 1.0 ['ENST00000361937.7_1_15:41388064-41388549:-|nuORF'] 72146 12298 MFVFKERWFWR True NCI_RA007_Epitope_Rep5 1630.8231092975398 1630.82200993586 53.955 2 -0.6226830319520028 0.18644147387534046 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 49216 8399 KENFQEYTEK True H1975_Epitope_Rep1 1314.6091958359796 1314.60808993586 37.234 2 -0.622762997472416 0.18644147387534046 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 18097 9972 EIIDFYNFMSP True H1975_Epitope_Rep2 1374.61658971554 1374.61495490379 43.346 3 -0.6227695548104044 0.18644147387534046 1.0 ['ENSG00000112941|ENST00000230859|TENT4A'] 138092 7648 YGGLRGAI True PC9_epitope_Rep1 805.4446371405298 805.44354993586 34.24 2 -0.6227818215520331 0.18644147387534046 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 411 16498 AALGPIAKAL True PC9_epitope_Rep2 923.5804023373499 923.57930993586 68.701 2 -0.6228045311422675 0.18644147387534046 1.0 ['ENSG00000189181|ENST00000342623|OR14I1'] 9059 15981 AVIATASAPP True PC9_epitope_Rep1 896.4967322830399 896.49562993586 66.28 2 -0.6228415984430921 0.18644147387534046 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 92628 5806 RNEERWPRGRP True NCI_RA007_Epitope_Rep5 1451.7494267633097 1451.74777490379 29.018 3 -0.6228751019320713 0.18644147387534046 1.0 ['ENST00000373115.4_1_10:73769153-73769792:+|nuORF'] 77470 10549 NSWPSPTEP True H1975_Epitope_Rep1 1013.4454249861699 1013.44432993586 45.531 2 -0.6228807230184153 0.18644147387534046 1.0 ['ENSG00000125498|ENST00000336077|KIR2DL1', 'nc|ENSG00000125498|P43626-2|KIR2DL1', 'nc|ENSG00000243772|P43628-2|KIR2DL3', 'ENST00000415311.1_1_19:55270285-55278820:+|nuORF', 'ENSG00000243772|ENST00000342376|KIR2DL3', 'ENST00000339924.12_2_19:55351009-55359395:+|nuORF', 'nc|ENSG00000221957|P43632|KIR2DS4'] 83140 15414 PSQTCFQSLL True PC9_epitope_Rep1 1122.5379454720198 1122.5368499358601 64.108 2 -0.6228905374198 0.18644147387534046 1.0 ['ENST00000290551.4_1_1:203278127-203278334:+|nuORF'] 80489 6723 PGLRPSHPP True PC9_epitope_Rep5 956.5191990631199 956.51810993586 30.83 2 -0.6229793086369412 0.18647967568752055 1.0 ['ENSG00000133246|ENST00000423345|PRAM1'] 9158 15163 AVLDRNVAI True PC9_epitope_Rep6 969.5607295219299 969.55962993586 70.4 2 -0.6229830867801043 0.18647967568752055 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 22069 8146 ESLVEIADTVP True NCI_RA007_Epitope_Rep1 1171.5972341699498 1171.59612993586 35.685 2 -0.62300147558521 0.18647967568752055 1.0 ['ENSG00000137040|ENST00000259569|RANBP6'] 60750 22970 LHRRRKLD True PC9_epitope_Rep4 1092.66284360504 1092.6617499358601 96.573 2 -0.6230505429552069 0.18653936453279074 1.0 ['ENSG00000196476|ENST00000360321|C20orf96'] 128035 25458 VPKKLLMMAG True PC9_epitope_Rep3 1086.6293437590598 1086.6282499358601 103.37 2 -0.6231156567358674 0.1865462570234611 1.0 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF', 'ENST00000438210.1_1_1:40428398-40429073:+|nuORF', 'ENST00000479476.1_1_18:68097766-68098228:+|nuORF'] 19725 12788 ELRRLEEL True PC9_epitope_Rep2 1056.5927579262 1056.5916699358602 54.491 2 -0.6231271537409678 0.1865462570234611 1.0 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'PSPC1|p.Q340R|1|0.61|ENSG00000121390|chr13:19741598-19741598|T/C|missense_variant'] 135791 4648 WMWWRRNRRGK True NCI_RA007_Epitope_Rep1 1630.8527867163796 1630.85057987172 22.166 4 -0.623159755137429 0.1865462570234611 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 60668 19156 LHLRWTQP True PC9_epitope_Rep1 1049.57704829241 1049.57594993586 78.477 2 -0.6232118620226937 0.1865589883244123 1.0 ['ENST00000268893.10_1_17:56393882-56399727:-|nuORF'] 86496 25232 QKVWKRWKKRY True PC9_epitope_Rep6 1604.9415846374395 1604.9399249037901 112.33 3 -0.6232422928990716 0.18657171922685656 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 4368 6262 AILRRNWNQYK True NCI_RA007_Epitope_Rep5 1460.80006535384 1460.79841490379 30.764 3 -0.6233251199035851 0.18658444973081256 1.0 ['ENSG00000064989|ENST00000392370|CALCRL'] 75955 22221 NLTEARVRVWF True PC9_epitope_Rep5 1389.7517181790897 1389.7506299358602 90.478 2 -0.6233771692445103 0.18661283002331877 1.0 ['nc|ENSG00000164093|Q99697-3|PITX2', 'ENSG00000107859|ENST00000370002|PITX3', 'nc|ENSG00000164093|Q99697|PITX2', 'ENSG00000164093|ENST00000644743|PITX2'] 78880 13100 PAGAIAPLG True PC9_epitope_Rep4 765.43848913093 765.4379449679301 58.283 1 -0.6234211535530078 0.18668523764065165 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 79414 7763 PATLSQTIV True H1975_Epitope_Rep2 928.52294703088 928.52184993586 34.808 2 -0.6234224809192584 0.18668523764065165 1.0 ['PROC|p.I390Tfs*28|1|0.17|ENSG00000115718|chr2:127428723-127428732|CGGGCATCCT/-|frameshift_variant', 'ENSG00000115718|ENST00000234071|PROC', 'nc|ENSG00000115718|P04070-2|PROC'] 74282 21376 NEKFYGVTVF True PC9_epitope_Rep2 1202.5971746003 1202.5960699358602 87.692 2 -0.6234593162724918 0.1867449139280125 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF', 'ENST00000481465.3_1_1:43215737-43220567:-|nuORF'] 116772 13767 TVDQAVETY True H1975_Epitope_Rep1 1024.47130538084 1024.4707749679299 58.098 1 -0.6235218956068511 0.18675471816218583 1.0 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000574210.5_1_17:2597327-2598221:-|nuORF'] 35375 12195 GSCRKKAP True PC9_epitope_Rep1 845.4541562784099 845.45304993586 51.766 2 -0.6235285326863703 0.18675471816218583 1.0 ['ENST00000505276.2_1_12:3407303-3409365:-|nuORF'] 60420 5613 LGVCPPWKA True PC9_epitope_Rep5 969.5106085253699 969.50950993586 26.593 2 -0.6236248924801621 0.18676744440793078 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.T606Nfs*97|1|0.33|ENSG00000205978|chr14:24409604-24409605|-/A|frameshift_variant'] 95337 16420 RVRVKGGG True H1975_Epitope_Rep1 827.5089687325898 827.50786993586 68.519 2 -0.6236799717987932 0.1868114672008012 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 88648 17178 QTELVMFILFR True H1975_Epitope_Rep3 1395.75844335231 1395.75734993586 71.712 2 -0.6236880323236734 0.18681834540817124 1.0 ['XPO5|p.L158F|1|0.22|ENSG00000124571|chr6:43570649-43570649|C/A|missense_variant'] 30240 12635 FYVEHPEV True PC9_epitope_Rep4 1018.4759968384599 1018.47488993586 56.439 2 -0.6237009251643253 0.18681834540817124 1.0 ['DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 129477 26195 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 108.41 2 -0.6237048699444772 0.18681834540817124 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 22757 5677 ETVHQLSKT True H1975_Epitope_Rep3 1041.54547338061 1041.54436993586 26.865 2 -0.6237107439660435 0.18683106966264004 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'SPTBN1|p.R1656Q|1|0.11|ENSG00000115306|chr2:54647231-54647231|G/A|missense_variant'] 23303 15907 EVQITEFMFT True PC9_epitope_Rep1 1243.5794759308296 1243.57783490379 65.997 3 -0.6238635927071632 0.1869220297610665 1.0 ['ENST00000381222.8_2_X:2405824-2406046:-|nuORF'] 42490 9103 IEEGHLAVYY True H1975_Epitope_Rep1 1192.57643915572 1192.57534993586 39.918 2 -0.6238824802087173 0.18693182707202202 1.0 ['ENSG00000107566|ENST00000421367|ERLIN1'] 85294 8362 QEQRRVDP True H1975_Epitope_Rep3 1026.5206556150997 1026.5195499358601 37.147 2 -0.6238899932288963 0.18693182707202202 1.0 ['nc|ENSG00000168256|Q9NYR9-3|NKIRAS2', 'nc|ENSG00000168256|Q9NYR9-2|NKIRAS2', 'ENSG00000168256|ENST00000393885|NKIRAS2'] 82054 18781 PLYIGEVVL True NCI_RA007_Epitope_Rep5 1001.57973363101 1001.57862993586 79.077 2 -0.6239351261765876 0.18697291630810634 1.0 ['ENSG00000255154|ENST00000461393|HTD2'] 91148 7180 RFYLVSGGVHF True NCI_RA007_Epitope_Rep2 1280.6665915727997 1280.66494490379 32.55 3 -0.6239645289424035 0.18697291630810634 1.0 ['ADGRA1|p.P143H|1|0.5|ENSG00000197177|chr10:133127259-133127259|C/A|missense_variant'] 1339 11703 AEDVYDVPPP True H1975_Epitope_Rep2 1100.50260550912 1100.5015099358602 50.091 2 -0.6240324734469206 0.18700522544510154 1.0 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 66319 12692 LSFVLYFTVP True PC9_epitope_Rep5 1184.648147544 1184.6470499358602 53.825 2 -0.62403545646083 0.18700522544510154 1.0 ['ENSG00000185052|ENST00000328041|SLC24A3'] 86497 25292 QKVWKRWKKRY True PC9_epitope_Rep6 1604.9415846374395 1604.9399249037901 112.67 3 -0.6240402363871022 0.18700522544510154 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 8608 6808 ATYLWRKSFKW True H1975_Epitope_Rep1 1484.79285471508 1484.79121490379 31.231 3 -0.6240469028118076 0.18700522544510154 1.0 ['ENST00000466650.5_1_3:182788929-182817286:-|nuORF'] 140918 22896 YSEIAYLFA True PC9_epitope_Rep2 1075.52261267771 1075.5215099358602 93.573 2 -0.6240574634029951 0.18700522544510154 1.0 ['ENSG00000134780|ENST00000257215|DAGLA'] 2355 3733 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 19.429 2 -0.6240718259134577 0.1870179445861168 1.0 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 15551 6976 EAPSLRPAPP True H1975_Epitope_Rep3 1033.55564414149 1033.5545499358602 31.795 2 -0.6241789785230724 0.18706195244055068 1.0 ['ENSG00000171564|ENST00000302068|FGB', 'FGB|p.A136Lfs*16|1|0.07|ENSG00000171564|chr4:154566586-154566586|A/-|frameshift_variant'] 85704 14354 QGWRKSSI True NCI_RA007_Epitope_Rep4 960.51411368268 960.5130099358599 62.521 2 -0.6242285842962936 0.18710595891803947 1.0 ['ENSG00000182631|ENST00000330120|RXFP3'] 61619 7190 LKMKSPLCT True PC9_epitope_Rep5 1019.55075908519 1019.54966993586 32.621 2 -0.6243051336836524 0.18714703627802198 1.0 ['ENSG00000198786|ENST00000361567|MT-ND5'] 120492 15142 VEEYVYEFRDK True H1975_Epitope_Rep3 1475.6932598131095 1475.6921699358602 63.643 2 -0.6243792252306932 0.18714703627802198 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 95575 17230 RWSRRTLYVQ True PC9_epitope_Rep2 1363.74730150499 1363.7462099358602 71.536 2 -0.6244323838230182 0.1871753957824917 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 16823 9325 EEWVRHLQRHI True PC9_epitope_Rep5 1501.79022894613 1501.78801987172 40.821 4 -0.624447419812819 0.1871881110676574 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 30832 10053 GAPEPFEPAQP True PC9_epitope_Rep2 1138.5294889632999 1138.52838993586 43.996 2 -0.6245138216066659 0.18727611181503903 1.0 ['ENSG00000101200|ENST00000380293|AVP'] 136618 8498 WWPSEDGDY True H1975_Epitope_Rep1 1153.4352542252898 1153.4341499358602 37.617 2 -0.6245204533752577 0.18727611181503903 1.0 ['ENSG00000198722|ENST00000635942|UNC13B'] 14372 5902 DTALHVALQR True H1975_Epitope_Rep3 1122.61455599994 1122.6134499358602 27.712 2 -0.6246366080083706 0.18730153764332305 1.0 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'ENST00000511502.5_1_1:1563563-1565907:+|nuORF', 'ENST00000506488.5_1_1:1562112-1565907:+|nuORF'] 47163 5992 ITWFANDREIK True H1975_Epitope_Rep1 1391.7197493444698 1391.71810490379 28.12 3 -0.6246513829853353 0.18730153764332305 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 6671 14715 APYFITKPV True H1975_Epitope_Rep2 1034.5800679841798 1034.5789699358602 61.762 2 -0.6247489016135701 0.1873367431529883 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 79912 17349 PEQKIEREKER True NCI_RA007_Epitope_Rep3 1440.76849044204 1440.7673899358601 76.135 2 -0.6247746596937249 0.1873367431529883 1.0 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 75417 3494 NIVLISCDR True NCI_RA007_Epitope_Rep4 1031.54336520563 1031.54226993586 19.396 2 -0.624788230831659 0.1873367431529883 1.0 ['HRH3|p.Y130C|1|0.2|ENSG00000101180|chr20:62218519-62218519|T/C|missense_variant'] 59834 7359 LGFFFQSV True PC9_epitope_Rep3 943.4803539429098 943.47924993586 33.316 2 -0.6248344066867447 0.1873367431529883 1.0 ['ENST00000398637.9_1_12:46576929-46576956:-|nuORF'] 9155 17503 AVLDRNVAI True PC9_epitope_Rep3 969.5607295219299 969.55962993586 72.503 2 -0.6249872351359006 0.18739637751431162 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 1282 8888 AEDMWLAGY True H1975_Epitope_Rep2 1054.4429824580197 1054.4418899358602 39.158 2 -0.6250002491550112 0.18740908735434425 1.0 ['ENST00000454838.6_1_11:869018-869621:-|nuORF'] 63363 7846 LLTTKSDQLEP True H1975_Epitope_Rep1 1243.66598243611 1243.66432490379 35.13 3 -0.6250891131496946 0.18743743743743743 1.0 ['NCOA2|p.M652L|1|0.11|ENSG00000140396|chr8:70156411-70156411|T/A|missense_variant'] 74436 5541 NETRPYTP True NCI_RA007_Epitope_Rep4 976.4614094034799 976.46030993586 27.909 2 -0.6251251771104437 0.18744721448903626 1.0 ['ENST00000411532.1_1_22:30197042-30198089:-|nuORF'] 71598 4418 MDHVNEVYVKE True NCI_RA007_Epitope_Rep2 1361.6285513815703 1361.62690490379 21.818 3 -0.6251483945789591 0.18744721448903626 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 40786 14547 HRWRFTCYYYY True NCI_RA007_Epitope_Rep2 1656.72960283552 1656.72850993586 61.247 2 -0.625152971644659 0.18745992273886047 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'LILRB3|p.G292Afs*25|1|0.25|ENSG00000204577|chr19:54221163-54221163|C/-|frameshift_variant', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3'] 95441 6434 RWHMKRWEYFI True NCI_RA007_Epitope_Rep1 1650.8241719267 1650.82197987172 29.05 4 -0.6251994516183066 0.18746774672775893 1.0 ['F5|p.R345W|1|0.11|ENSG00000198734|chr1:169555267-169555267|G/A|missense_variant'] 110432 2811 TEYTEGNKLRK True NCI_RA007_Epitope_Rep2 1337.69392851945 1337.6922749037901 15.263 3 -0.6252096337635035 0.18746774672775893 1.0 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 111953 9176 TIQHIVAEK True H1975_Epitope_Rep1 1037.58694426977 1037.58584993586 40.201 2 -0.6252749247017143 0.18746774672775893 1.0 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ABCA2|p.R973Afs*36|1|0.26|ENSG00000107331|chr9:137016581-137016581|C/-|frameshift_variant'] 21077 6939 EQWTPFLYDFY True H1975_Epitope_Rep3 1507.66598243611 1507.66432490379 31.652 3 -0.6253934138969356 0.18746774672775893 1.0 ['ENSG00000101188|ENST00000370501|NTSR1'] 100158 12825 SITRMKRIFY True NCI_RA007_Epitope_Rep1 1313.7278119303699 1313.72670993586 53.875 2 -0.6254051609053626 0.18746774672775893 1.0 ['ENSG00000111536|ENST00000229134|IL26'] 61727 17851 LLAEELWS True PC9_epitope_Rep5 959.49639792987 959.49530993586 73.683 2 -0.625407422942839 0.18746774672775893 1.0 ['SMG1|p.K2298E|1|0.27|ENSG00000157106|chr16:18839751-18839751|T/C|missense_variant'] 29444 2716 FVEEWRKFVRK True NCI_RA007_Epitope_Rep2 1522.8408675366597 1522.8392249037902 14.792 3 -0.6254204355053515 0.18746774672775893 1.0 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48'] 12951 17774 DLLEMATFLQK True H1975_Epitope_Rep1 1307.6795243252702 1307.67842993586 73.988 2 -0.6254212744621382 0.18746774672775893 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43'] 26133 11887 FGYATLPWMYL True PC9_epitope_Rep1 1360.65258130144 1360.6509449037899 50.589 3 -0.6254245871639093 0.18748045286795523 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 75878 10412 NLQNQASLSF True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 45.372 2 -0.625431997218856 0.18749022673964033 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 135179 10296 WEQNLKDP True H1975_Epitope_Rep2 1028.4927095317598 1028.4916099358602 44.609 2 -0.625437603724787 0.18749022673964033 1.0 ['nc|ENSG00000028116|Q86Y07-4|VRK2', 'nc|ENSG00000028116|Q86Y07-5|VRK2', 'nc|ENSG00000028116|Q86Y07-2|VRK2', 'nc|ENSG00000028116|Q86Y07-3|VRK2', 'ENSG00000028116|ENST00000340157|VRK2'] 85650 11070 QGLTANSL True PC9_epitope_Rep3 802.41848196234 802.41738993586 47.581 2 -0.6254900779215931 0.18753127345509132 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 85688 8310 QGTRLPSL True PC9_epitope_Rep5 870.4923156089399 870.49120993586 36.903 2 -0.6255024818047715 0.18753127345509132 1.0 ['ENST00000592414.1_1_19:3055403-3056603:-|nuORF'] 80944 20962 PIEEAYAIL True PC9_epitope_Rep4 1017.5382627418497 1017.53716993586 88.791 2 -0.625533652072118 0.18753224822927905 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant', 'DNAH8|p.A1622Qfs*38|1|0.24|ENSG00000124721|chr6:38852742-38852742|G/-|frameshift_variant'] 58767 18455 LESFPPFP True PC9_epitope_Rep1 932.4643695255999 932.46326993586 75.779 2 -0.6255707145974195 0.18753224822927905 1.0 ['ENST00000263354.7_1_19:47991268-47991526:-|nuORF'] 29246 4666 FTWDKWLK True NCI_RA007_Epitope_Rep2 1122.58621599378 1122.5845649037901 22.775 3 -0.6255781978914268 0.18753224822927905 1.0 ['ENSG00000111684|ENST00000261407|LPCAT3', 'ENST00000535479.5_1_12:7086310-7087113:-|nuORF', 'nc|ENSG00000111684|Q6P1A2-2|LPCAT3'] 13386 18190 DLYFHQAL True PC9_epitope_Rep6 1005.4919812557699 1005.49088993586 82.609 2 -0.6255913191823942 0.18753224822927905 1.0 ['ENST00000473136.4_2_3:88108451-88184391:+|nuORF', 'ENSG00000175105|ENST00000636215|ZNF654'] 72398 25316 MKKLKLKKMTS True PC9_epitope_Rep2 1334.81418440662 1334.81308993586 103.05 2 -0.6255969307518456 0.18753224822927905 1.0 ['ENST00000490863.5_1_1:54651905-54653456:-|nuORF', 'ENST00000420054.5_1_1:54651905-54661258:-|nuORF'] 142224 9304 YWKRHRNQDRE True PC9_epitope_Rep4 1586.78145516758 1586.77981490379 43.396 3 -0.6256974614649096 0.1875605866349792 1.0 ['ENSG00000091972|ENST00000315711|CD200', 'nc|ENSG00000091972|P41217-3|CD200'] 19252 12897 ELKEDIVERLW True H1975_Epitope_Rep1 1428.7612798032796 1428.7601899358601 54.68 2 -0.6257399666138285 0.18760455917071875 1.0 ['ENSG00000135763|ENST00000258243|URB2', 'URB2|p.L474Ffs*10|1|0.14|ENSG00000135763|chr1:229636030-229636031|-/T|frameshift_variant'] 16916 16143 EFPRFVRVWWR True H1975_Epitope_Rep1 1576.8415362429998 1576.8404299358601 67.437 2 -0.6257536194867177 0.1876143274808086 1.0 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'ENST00000348624.4_1_7:4815294-4820850:+|nuORF'] 19761 7078 ELSDEDDEDYW True NCI_RA007_Epitope_Rep2 1414.50484990674 1414.50319490379 32.156 3 -0.625753843657142 0.1876143274808086 1.0 ['nc|ENSG00000135679|Q00987-3|MDM2'] 81853 23238 PLQPLQVYQ True H1975_Epitope_Rep1 1084.59169529704 1084.5905899358602 96.604 2 -0.6258347421169675 0.1876270285482005 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 102772 2743 SNKETDPPP True H1975_Epitope_Rep2 983.4559896698698 983.45488993586 14.593 2 -0.6258767965131293 0.18763386226842804 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 129527 16946 VRKRTAGI True NCI_RA007_Epitope_Rep2 899.5664836087099 899.56538993586 70.654 2 -0.6258769375157288 0.18763386226842804 1.0 ['ENST00000523958.5_1_8:23291828-23307413:-|nuORF', 'nc|ENSG00000197217|Q9Y227-2|ENTPD4', 'ENSG00000197217|ENST00000358689|ENTPD4', 'ENTPD4|p.I261L|1|0.12|ENSG00000197217|chr8:23441670-23441670|T/G|missense_variant'] 68217 14942 LTDYRGKYL True PC9_epitope_Rep2 1127.5975089534697 1127.59640993586 62.735 2 -0.6258977870395307 0.18763386226842804 1.0 ['ENSG00000123131|ENST00000379341|PRDX4'] 61221 17286 LILTILTNN True PC9_epitope_Rep6 1013.61209638845 1013.61098993586 79.096 2 -0.6259741333588359 0.18770616098926007 1.0 ['ENST00000398117.1_1_18:60986101-60986167:-|nuORF'] 70035 17567 LVNAILPG True PC9_epitope_Rep5 795.48543932335 795.48434993586 72.579 2 -0.6260028663340045 0.18770616098926007 1.0 ['nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 73513 18311 MVKEVWRVLRE True NCI_RA007_Epitope_Rep2 1443.80203949979 1443.8009499358602 75.982 2 -0.62603697556646 0.18773449224612307 1.0 ['nc|ENSG00000250317|Q8N5G0-2|SMIM20'] 57875 8308 LEFLDVQK True H1975_Epitope_Rep3 990.53859709502 990.53750993586 36.94 2 -0.6260573517884042 0.1877442551195873 1.0 ['ENST00000383742.7_2_3:46712476-46718839:-|nuORF', 'nc|ENSG00000178038|Q60I27-3|ALS2CL', 'nc|ENSG00000178038|Q60I27-2|ALS2CL', 'ENSG00000178038|ENST00000318962|ALS2CL', 'ENST00000498817.5_1_3:46713372-46716156:-|nuORF', 'nc|ENSG00000178038|Q60I27-5|ALS2CL', 'ENST00000486301.5_1_3:46712476-46716264:-|nuORF', 'ENST00000434140.5_2_3:46712476-46717187:-|nuORF', 'nc|ENSG00000178038|Q60I27-6|ALS2CL', 'ENST00000473484.1_1_3:46713038-46716081:-|nuORF', 'nc|ENSG00000178038|Q60I27-4|ALS2CL'] 82589 21943 PQANHSHSV True PC9_epitope_Rep1 975.4522417021102 975.45114993586 89.222 2 -0.6260611724721818 0.1877442551195873 1.0 ['FCGR2A|p.G183V|1|0.2|ENSG00000143226|chr1:161510003-161510003|G/T|missense_variant'] 47079 19935 ITSYFVLFA True PC9_epitope_Rep1 1059.5640835668698 1059.56298993586 81.5 2 -0.6261450420042277 0.18777258445232997 1.0 ['ENST00000416428.1_9:69204965-69205142:-|nuORF'] 112130 5257 TIYGKICHFR True NCI_RA007_Epitope_Rep2 1236.6437479532399 1236.64210490379 25.069 3 -0.6261727352959091 0.18781654473832302 1.0 ['ENSG00000147082|ENST00000376042|CCNB3'] 40785 14808 HRWRFTCYYYY True NCI_RA007_Epitope_Rep1 1656.72960283552 1656.72850993586 61.658 2 -0.6262274322874479 0.18782924046081942 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'LILRB3|p.G292Afs*25|1|0.25|ENSG00000204577|chr19:54221163-54221163|C/-|frameshift_variant', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3'] 119293 19620 VALRSRAG True PC9_epitope_Rep2 828.4929843152798 828.49188993586 80.853 2 -0.6262351221579877 0.18784193578641323 1.0 ['ENST00000312838.8_1_16:88763521-88763863:-|nuORF'] 137754 14306 YENLKWTLERK True NCI_RA007_Epitope_Rep2 1478.7881632574597 1478.78706993586 60.311 2 -0.6262461477416551 0.18787026182102384 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57', 'CCDC57|p.E177Sfs*20|1|0.5|ENSG00000176155|chr17:82195352-82195352|C/-|frameshift_variant'] 136946 11366 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.3808149679301 48.6 1 -0.6263074762445131 0.1878829561085407 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 58396 7094 LENQLETPP True H1975_Epitope_Rep3 1039.51858992643 1039.51748993586 32.256 2 -0.6263621257614084 0.18791128061647155 1.0 ['ZNF449|p.W273L|1|0.1|ENSG00000173275|chrX:135360337-135360337|G/T|missense_variant'] 128263 9550 VPPGNGNI True PC9_epitope_Rep1 766.39735259494 766.3962499358599 41.591 2 -0.6264308434977657 0.18792397386601645 1.0 ['nc|ENSG00000107897|Q5T8D3-4|ACBD5', 'nc|ENSG00000107897|Q5T8D3-2|ACBD5', 'ENSG00000107897|ENST00000396271|ACBD5', 'nc|ENSG00000107897|Q5T8D3|ACBD5'] 12681 5669 DLDRQEWERQK True H1975_Epitope_Rep1 1501.72735390605 1501.72570490379 26.875 3 -0.6264465203112161 0.1879366667187671 1.0 ['MTCL1|p.R1295L|1|0.63|ENSG00000168502|chr18:8819030-8819030|G/T|missense_variant'] 126989 13083 VLRSTVPVNTN True H1975_Epitope_Rep1 1198.6669854956199 1198.6658899358602 55.413 2 -0.6265638113727083 0.18797180501070596 1.0 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN', 'ENST00000461111.1_1_1:988956-990358:+|nuORF'] 64568 15395 LPSICAVALPF True PC9_epitope_Rep5 1129.6205528971698 1129.61890490379 64.224 3 -0.6266464940523067 0.18797180501070596 1.0 ['ENSG00000112337|ENST00000377850|SLC17A2', 'nc|ENSG00000112337|O00624|SLC17A2'] 92962 24297 RPIQLKIQDEK True PC9_epitope_Rep5 1366.7932486378998 1366.79161490379 98.481 3 -0.6266531138691938 0.18797180501070596 1.0 ['nc|ENSG00000169435|Q6ZTQ3-4|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3-3|RASSF6', 'ENSG00000169435|ENST00000307439|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3|RASSF6'] 46073 13310 ISGTSSPPHAL True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 56.23 2 -0.6266592731138306 0.18797180501070596 1.0 ['ENST00000462410.5_1_1:211533005-211533107:+|nuORF'] 126494 18946 VLLLGDVATL True PC9_epitope_Rep1 1012.61684741572 1012.61574993586 77.659 2 -0.6266935197722591 0.187984496124031 1.0 ['nc|ENSG00000123191|P35670-2|ATP7B', 'nc|ENSG00000123191|P35670-3|ATP7B', 'nc|ENSG00000123191|P35670-4|ATP7B', 'ENSG00000123191|ENST00000242839|ATP7B'] 65396 7013 LREGEAERKPV True PC9_epitope_Rep1 1282.69934825306 1282.69771490379 31.782 3 -0.6267103276298167 0.18799718684066577 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 69802 6834 LVGGFSCS True NCI_RA007_Epitope_Rep2 768.3476255212 768.3470749679301 31.199 1 -0.6267738455779734 0.18807239083549526 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 68455 12703 LTFAYERLL True PC9_epitope_Rep1 1124.62299542532 1124.6213549037902 53.734 3 -0.6270561816808063 0.18816322065419538 1.0 ['HEXA|p.S501L|1|0.32|ENSG00000213614|chr15:72345470-72345470|G/A|missense_variant'] 30950 13364 GARQQRWQ True H1975_Epitope_Rep3 1028.5264097018799 1028.5253099358602 56.669 2 -0.6270643736458295 0.18817296722874244 1.0 ['nc|ENSG00000215117|Q9Y4M8|LINC00588'] 87615 12753 QQPRTPILL True PC9_epitope_Rep4 1064.6342288153598 1064.63312993586 56.915 2 -0.6271082444939954 0.18817296722874244 1.0 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 111745 19615 TIHTHLEDL True PC9_epitope_Rep1 1077.54547338061 1077.54436993586 80.276 2 -0.6271746144969981 0.1881856540084388 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant'] 57299 7201 LEAAGDKF True PC9_epitope_Rep1 849.42323298961 849.42212993586 32.514 2 -0.6272106246073312 0.18819834039161756 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 142043 6230 YVLMDGDH True NCI_RA007_Epitope_Rep5 948.4011176460399 948.40002993586 30.64 2 -0.6272372211826803 0.18821102637829729 1.0 ['FAT2|p.A968D|1|0.14|ENSG00000086570|chr5:151566029-151566029|G/T|missense_variant'] 70658 26993 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 111.14 3 -0.6273234564348316 0.18826765009219615 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 120745 16580 VEKQLKLRERP True H1975_Epitope_Rep3 1394.83578215622 1394.83468993586 69.273 2 -0.6273360268993302 0.18826765009219615 1.0 ['ENST00000511562.5_1_4:164415926-164433975:+|nuORF'] 48916 20095 KEDYRRERWRK True NCI_RA007_Epitope_Rep2 1620.85970548828 1620.8586099358602 83.168 2 -0.6274363121306451 0.1883115868427221 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 88095 20855 QRRRLHRRRRS True NCI_RA007_Epitope_Rep5 1575.9519235940297 1575.95026490379 87.214 3 -0.6274654069331804 0.18833989624351521 1.0 ['ENST00000215832.10_1_22:22221790-22221904:-|nuORF'] 55169 18109 LAAPPCAW True PC9_epitope_Rep1 827.39999544723 827.39888993586 74.449 2 -0.6274740032156674 0.1883496359261227 1.0 ['ENST00000228606.8_1_12:58158304-58160873:-|nuORF', 'ENST00000546567.5_2_12:58158304-58159309:-|nuORF', 'ENST00000547451.1_1_12:58158414-58159309:-|nuORF'] 49832 4616 KHVHHHYIHHH True PC9_epitope_Rep5 1480.7337171295203 1480.73206490379 22.813 3 -0.6274754235098544 0.1883496359261227 1.0 ['ENSG00000168646|ENST00000307078|AXIN2'] 131913 7402 VTRREAGPG True H1975_Epitope_Rep3 941.5042772749698 941.50318993586 33.451 2 -0.6275078308560297 0.18836231816122126 1.0 ['chr15:43134014-43134257|119|13.86|0.72|4.26|+|1|None,TMEM62|1'] 67196 13872 LSRDLTCLL True PC9_epitope_Rep1 1032.56376629704 1032.5626699358602 58.199 2 -0.6275234446202779 0.18837205668661428 1.0 ['ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 74385 16759 NESAVIVAP True PC9_epitope_Rep2 898.4759968384599 898.47544496793 69.71 1 -0.6275239741453292 0.18837205668661428 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 34484 16301 GPLIVDWP True PC9_epitope_Rep2 895.4803539429099 895.47924993586 67.947 2 -0.6275283729832402 0.18837885132179238 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4', 'nc|ENSG00000113742|Q17RY0-3|CPEB4'] 109499 5358 TDLVIDSRP True H1975_Epitope_Rep3 1014.5345743437399 1014.53346993586 25.674 2 -0.6275342003640385 0.18837885132179238 1.0 ['ENSG00000232434|ENST00000436881|AJM1'] 119219 24607 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48628496793 103.14 1 -0.6275558032865698 0.18837885132179238 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 29486 10329 FVFKERWFWRV True NCI_RA007_Epitope_Rep2 1598.8510382975398 1598.84938490379 44.767 3 -0.6275905679718496 0.1883915319115694 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 116054 2607 TSPISVTK True NCI_RA007_Epitope_Rep5 831.47018318203 831.46908993586 14.734 2 -0.6276354727411602 0.18840421210511515 1.0 ['ENSG00000159592|ENST00000355105|GPBP1L1', 'GPBP1L1|p.P303Afs*3|1|0.07|ENSG00000159592|chr1:45633626-45633627|-/C|frameshift_variant'] 74384 17143 NESAVIVAP True PC9_epitope_Rep1 898.4759968384599 898.47544496793 70.763 1 -0.6276992253059378 0.18842957130358706 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 8265 4737 ATHTLDWLK True NCI_RA007_Epitope_Rep5 1083.57129420563 1083.57018993586 24.904 2 -0.6277068576716139 0.18842957130358706 1.0 ['ENSG00000075035|ENST00000547525|WSCD2', 'nc|ENSG00000075035|Q2TBF2-2|WSCD2'] 73530 9364 MVNTLLERY True H1975_Epitope_Rep1 1137.5852300176098 1137.5841299358601 40.926 2 -0.6277441820125664 0.18847055147633182 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 122451 16333 VGEALKTVL True PC9_epitope_Rep2 928.5593325396 928.55822993586 68.072 2 -0.627765396983393 0.18847055147633182 1.0 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'DMD|p.H1690Tfs*31|1|0.14|ENSG00000198947|chrX:32364668-32364668|G/-|frameshift_variant'] 14795 12813 DVQALSLWQKF True NCI_RA007_Epitope_Rep1 1333.7030366511697 1333.70192993586 53.829 2 -0.6277920020010107 0.1885144740747684 1.0 ['ENSG00000146282|ENST00000369536|RARS2'] 46840 11248 ITIGPRLFLPC True NCI_RA007_Epitope_Rep1 1228.7002002002 1228.6991099358602 47.752 2 -0.6278553164001521 0.18854277323001936 1.0 ['NAV3|p.V2236I|1|0.14|ENSG00000067798|chr12:78199522-78199522|G/A|missense_variant'] 18927 9000 ELEERECYP True H1975_Epitope_Rep2 1166.49138920242 1166.4902899358601 39.569 2 -0.6278838855788015 0.18857107150110133 1.0 ['ENSG00000102921|ENST00000262384|N4BP1', 'ENST00000564124.5_1_16:48580029-48653834:-|nuORF', 'N4BP1|p.V127Cfs*5|1|0.37|ENSG00000102921|chr16:48562264-48562265|-/A|frameshift_variant'] 119206 25165 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 104.3 1 -0.6279332325879574 0.18859936888805573 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 135831 21900 WNRRVQQRRHL True NCI_RA007_Epitope_Rep5 1547.8657939282298 1547.86414490379 91.367 3 -0.6280045204949707 0.1886090977255686 1.0 ['ENST00000589838.5_1_19:11548888-11548933:+|nuORF'] 119222 24793 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48628496793 103.87 1 -0.6280048144435029 0.1886090977255686 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 78826 21896 PADLLLFLI True PC9_epitope_Rep6 1013.61611913973 1013.61502993586 97.124 2 -0.6280338991810885 0.18862560722263008 1.0 ['ENST00000455309.1_1_2:112249080-112249152:+|nuORF'] 66791 10671 LSLSRMIP True PC9_epitope_Rep3 915.52117320907 915.52006993586 45.992 2 -0.6280440741552292 0.18862560722263008 1.0 ['ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 127962 11380 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 48.654 2 -0.628148576382684 0.18862560722263008 1.0 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 134982 24199 WCLGWWRPCP True NCI_RA007_Epitope_Rep2 1302.5790395216998 1302.57794993586 101.63 2 -0.6281786662747895 0.18862560722263008 1.0 ['ENST00000562503.5_3_16:57806199-57831993:-|nuORF'] 127349 23489 VMRILPRM True PC9_epitope_Rep3 1014.58306227298 1014.58196993586 95.628 2 -0.628188014066951 0.18862560722263008 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1'] 63014 7044 LLPSEHYVQS True NCI_RA007_Epitope_Rep4 1171.58733819259 1171.58624993586 33.721 2 -0.6282080334854757 0.18863533417678022 1.0 ['ENST00000396862.1_1_16:3350967-3351225:-|nuORF'] 17335 5474 EHARATVER True NCI_RA007_Epitope_Rep2 1067.54720471611 1067.5461099358602 25.91 2 -0.6282189373483379 0.18863533417678022 1.0 ['ENSG00000185085|ENST00000330574|INTS5'] 59238 20182 LFFAKNAP True PC9_epitope_Rep3 906.4963383602199 906.49524993586 82.886 2 -0.6283412470433495 0.188691917219836 1.0 ['ENST00000392491.2_6:123046798-123046876:+|nuORF'] 140226 373 YQYHLRQHTG True NCI_RA007_Epitope_Rep1 1301.62651766597 1301.6248649037902 1.9894 3 -0.6283428390511665 0.188691917219836 1.0 ['ENSG00000197483|ENST00000598519|ZNF628'] 12827 13029 DLGGTEILAP True H1975_Epitope_Rep3 984.5127762699999 984.51166993586 55.354 2 -0.6284050873438383 0.18871725990597715 1.0 ['ENSG00000110002|ENST00000456829|VWA5A', 'nc|ENSG00000110002|O00534-3|VWA5A', 'nc|ENSG00000110002|O00534-2|VWA5A'] 57987 10155 LEHFQEAS True H1975_Epitope_Rep2 959.43486030247 959.43376993586 44.061 2 -0.6284227578044477 0.18871725990597715 1.0 ['nc|ENSG00000136114|Q9NS62-2|THSD1', 'ENSG00000136114|ENST00000258613|THSD1'] 42235 6977 IDSRVQEY True PC9_epitope_Rep2 1008.4876241513198 1008.48652993586 32.234 2 -0.6284655269274914 0.18872698308578925 1.0 ['ENSG00000149346|ENST00000334534|SLX4IP'] 40686 23535 HRRRAKAL True H1975_Epitope_Rep1 1006.6260641734998 1006.62496993586 97.772 2 -0.6285224090891172 0.18872698308578925 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000470518.5_1_22:40803281-40805023:+|nuORF', 'ENST00000478085.5_1_22:40802939-40803686:+|nuORF'] 68903 11843 LTNPELFQL True PC9_epitope_Rep1 1073.57571087973 1073.57460993586 50.419 2 -0.6285326397286709 0.18873965328752149 1.0 ['PSMC6|p.R161L|1|0.12|ENSG00000100519|chr14:52713921-52713921|G/T|missense_variant'] 57302 7167 LEAAGDKF True PC9_epitope_Rep3 849.42323298961 849.42212993586 32.58 2 -0.6285954500139324 0.18878355796411114 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 123357 22532 VGLWRKRKF True PC9_epitope_Rep3 1188.7243812324398 1188.72328993586 91.944 2 -0.6286520359614853 0.18879622688655673 1.0 ['ENST00000455089.5_1_7:55087016-55210125:+|nuORF'] 57835 5723 LEEVADKP True NCI_RA007_Epitope_Rep2 899.4600124211498 899.45890993586 26.878 2 -0.6287054401085265 0.1888088954133025 1.0 ['ENSG00000177238|ENST00000322122|TRIM72', 'nc|ENSG00000177238|Q6ZMU5-2|TRIM72', 'TRIM72|p.P257Hfs*28|1|0.26|ENSG00000177238|chr16:31222852-31222852|C/-|frameshift_variant'] 137401 6076 YEAGRAGP True H1975_Epitope_Rep2 819.3875161872298 819.38640993586 28.35 2 -0.6287551255037283 0.18882156354436705 1.0 ['nc|ENSG00000173153|P11474-2|ESRRA', 'ENSG00000173153|ENST00000000442|ESRRA'] 101755 18238 SLNPPPLPAP True PC9_epitope_Rep6 1001.55458151233 1001.55348993586 82.794 2 -0.6287765673110598 0.18883423127976887 1.0 ['ENST00000380599.8_1_17:7365097-7365262:-|nuORF'] 129771 23591 VRRGKKRVK True NCI_RA007_Epitope_Rep4 1125.75707834305 1125.75657496793 102.34 1 -0.6288093750956 0.18884100065586057 1.0 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 89054 16789 QVLRASSELP True PC9_epitope_Rep3 1098.6033226099 1098.6022299358601 69.726 2 -0.6288306993874431 0.18884100065586057 1.0 ['nc|ENSG00000177234|Q8N1V8|LINC01561'] 79627 10875 PDLVNVIK True H1975_Epitope_Rep3 896.53311779176 896.53202993586 46.913 2 -0.6288534610164066 0.18884100065586057 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000493342.1_1_X:24745055-24752029:+|nuORF'] 86880 12315 QLRKDPAL True PC9_epitope_Rep1 939.5501648382298 939.54906993586 52.225 2 -0.6288573692383936 0.1888536672964912 1.0 ['ENSG00000116138|ENST00000375847|DNAJC16', 'nc|ENSG00000116138|Q9Y2G8-2|DNAJC16', 'DNAJC16|p.K597*|1|0.22|ENSG00000116138|chr1:15567107-15567108|-/T|frameshift_variant', 'ENST00000483270.1_1_1:15886792-15891842:+|nuORF'] 54656 12586 KYLQPKVNP True PC9_epitope_Rep1 1085.62332977849 1085.62222993586 53.279 2 -0.6288836233900517 0.18887899939101513 1.0 ['ENST00000456324.5_1_19:36727248-36727317:+|nuORF'] 74377 14562 NERRFVNIP True H1975_Epitope_Rep2 1143.61489035311 1143.61378993586 61.17 2 -0.6288845122314507 0.18887899939101513 1.0 ['FKBP9|p.K110N|1|0.15|ENSG00000122642|chr7:32974725-32974725|G/C|missense_variant'] 129896 25436 VRSKGRKF True PC9_epitope_Rep5 976.5930327097199 976.5924849679301 103.07 1 -0.6289131098149343 0.18888576603585036 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 2394 6394 AEQEEMFRSP True H1975_Epitope_Rep3 1222.5288373402998 1222.5277499358601 29.573 2 -0.6289212838410858 0.18888576603585036 1.0 ['CON__Q3T052'] 83251 8926 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 39.279 2 -0.6289274809937253 0.18888576603585036 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 129897 25517 VRSKGRKF True PC9_epitope_Rep5 976.5930327097199 976.5924849679301 103.41 1 -0.6289708790133117 0.18889253204677814 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 141830 11724 YVDFGNTAKI True NCI_RA007_Epitope_Rep2 1126.56587447202 1126.56476993586 50.2 2 -0.6289933347109321 0.18889253204677814 1.0 ['nc|ENSG00000132972|Q9BXT8-4|RNF17', 'nc|ENSG00000132972|Q9BXT8-5|RNF17', 'ENSG00000132972|ENST00000255324|RNF17'] 118794 16942 VAAEHNLQL True PC9_epitope_Rep5 993.5243440132099 993.52324993586 70.184 2 -0.6290289668049827 0.18889253204677814 1.0 ['nc|ENSG00000293451|Q8IZJ6-3|TDH', 'nc|ENSG00000293451|Q8IZJ6-2|TDH', 'nc|ENSG00000293451|Q8IZJ6|TDH'] 103253 6664 SPLHNQVL True PC9_epitope_Rep6 906.49231560894 906.49120993586 34.373 2 -0.6291481771936877 0.18895203597302024 1.0 ['SPATA31E1|p.P1087Qfs*6|1|0.41|ENSG00000177992|chr9:87887746-87887746|C/-|frameshift_variant', 'ENSG00000177992|ENST00000325643|SPATA31E1'] 59237 20227 LFFAKNAP True PC9_epitope_Rep1 906.4963383602199 906.49524993586 82.632 2 -0.629180548354162 0.18896469890240286 1.0 ['ENST00000392491.2_6:123046798-123046876:+|nuORF'] 35470 5535 GSIVNFSQDP True H1975_Epitope_Rep3 1062.4981888350198 1062.49708993586 26.339 2 -0.6291960623281061 0.18899297423887587 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 24729 5494 FAPDGEAR True NCI_RA007_Epitope_Rep2 861.3980808709299 861.39698993586 25.988 2 -0.6292377635665286 0.189002685318179 1.0 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant'] 58414 5904 LENVEGLPSP True NCI_RA007_Epitope_Rep2 1053.5342399905699 1053.5331499358601 27.582 2 -0.6292418487839704 0.189002685318179 1.0 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'ENST00000482556.5_1_20:47242425-47249020:-|nuORF'] 76994 18195 NRGLIRRPK True NCI_RA007_Epitope_Rep5 1108.69414373332 1108.69304993586 76.797 2 -0.6292432378501565 0.1890153466660422 1.0 ['ENST00000396757.5_1_9:35615990-35616170:-|nuORF'] 63533 7785 LLYYYMFLYFR True NCI_RA007_Epitope_Rep1 1590.79449450786 1590.7928549037902 34.272 3 -0.6293075151589038 0.18902800761857183 1.0 ['ENSG00000196131|ENST00000341702|VN1R2'] 79723 21372 PDVVMLIAF True PC9_epitope_Rep2 1003.5412399473099 1003.54014993586 87.676 2 -0.6293280171067354 0.18904066817578644 1.0 ['nc|ENSG00000110436|P43004-3|SLC1A2', 'nc|ENSG00000110436|P43004-2|SLC1A2', 'ENSG00000110436|ENST00000278379|SLC1A2'] 58244 7740 LELLWLQPA True H1975_Epitope_Rep3 1081.61718176889 1081.6160899358601 34.754 2 -0.6293556154228225 0.18906893967778193 1.0 ['nc|ENSG00000162981|Q96KN4-2|LRATD1', 'ENSG00000162981|ENST00000295092|LRATD1'] 112149 10159 TIYYADSVK True H1975_Epitope_Rep1 1058.5284263341398 1058.52732993586 44.015 2 -0.62951251413343 0.18914404358618106 1.0 ['nc|ENSG00000211964|P01763|IGHV3-48'] 78456 21575 NYLVRINEIK True PC9_epitope_Rep1 1260.71902106848 1260.7179299358602 87.81 2 -0.6295493998531794 0.189156701739049 1.0 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.Y188Ifs*12|1|0.05|ENSG00000135829|chr1:182854112-182854113|-/G|frameshift_variant'] 49831 9939 KHTKKEEENSM True H1975_Epitope_Rep3 1359.6452640748698 1359.6441699358602 43.262 2 -0.6295966795510934 0.18915754803864945 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L', 'SAMD9L|p.K155Nfs*2|1|0.26|ENSG00000177409|chr7:93135507-93135507|C/-|frameshift_variant', 'SAMD9L|p.G154Vfs*3|1|0.2|ENSG00000177409|chr7:93135511-93135511|C/-|frameshift_variant', 'nc|ENSG00000177409|Q8IVG5-2|SAMD9L'] 83509 14328 PTSVAIASI True PC9_epitope_Rep6 857.48583324617 857.48528496793 67.01 1 -0.6295981638690888 0.18915754803864945 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 44868 9248 INIQLLAEDRL True NCI_RA007_Epitope_Rep2 1296.7401504358797 1296.73904993586 40.583 2 -0.6296190556568071 0.18915754803864945 1.0 ['ENST00000493315.1_1_2:63631156-63711794:-|nuORF', 'nc|ENSG00000143951|O95876-3|WDPCP', 'nc|ENSG00000143951|O95876-2|WDPCP', 'ENST00000409835.5_1_2:63587012-63815411:-|nuORF', 'ENSG00000143951|ENST00000272321|WDPCP'] 122195 14772 VGALMISVPA True NCI_RA007_Epitope_Rep4 956.5364889200399 956.5353899358599 64.281 2 -0.6296241538182202 0.18915754803864945 1.0 ['nc|ENSG00000155256|Q5T4F4-4|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-8|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-2|ZFYVE27', 'ENSG00000155256|ENST00000684270|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-3|ZFYVE27'] 119211 25870 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 107.06 1 -0.62963086381143 0.18915754803864945 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 96819 4435 SARQPLGSL True PC9_epitope_Rep6 927.5137793295099 927.51268993586 24.212 2 -0.629656204563356 0.18916725200967768 1.0 ['ENSG00000257108|ENST00000424439|NHLRC4'] 47054 17940 ITSELSTTII True PC9_epitope_Rep1 1076.59650589396 1076.59540993586 73.798 2 -0.6296900152154903 0.18916725200967768 1.0 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF'] 102377 13686 SLTEYLQNV True PC9_epitope_Rep3 1065.5342399905699 1065.5331499358601 57.716 2 -0.6297207926806638 0.18917990821964847 1.0 ['KIF5B-MET|1|fusion', 'ENSG00000170759|ENST00000302418|KIF5B'] 84734 10495 QDRRFNDEIDK True H1975_Epitope_Rep3 1434.6851547408999 1434.68350490379 45.432 3 -0.6297972744924547 0.18919256403452636 1.0 ['ENSG00000128655|ENST00000286063|PDE11A'] 79462 7387 PAVRYWRRKT True PC9_epitope_Rep6 1331.7574722658696 1331.75581490379 37.626 3 -0.6298083430052347 0.18920521945432978 1.0 ['ENST00000488349.1_1_2:175260903-175262068:+|nuORF'] 110501 16794 TFGVPAEELF True NCI_RA007_Epitope_Rep1 1108.54407639828 1108.5429699358601 69.453 2 -0.6298346032918649 0.18921787447907726 1.0 ['nc|ENSG00000292336|P46597-2|ASMT', 'nc|ENSG00000292336|P46597|ASMT', 'ENSG00000196433|ENST00000381241|ASMT'] 129387 17208 VRELRGLG True NCI_RA007_Epitope_Rep1 898.5348491272598 898.53374993586 71.067 2 -0.6298674752954353 0.18926174496644296 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 117349 21109 TVPDLLLPL True PC9_epitope_Rep6 979.59538369515 979.59428993586 94.032 2 -0.6299077824876552 0.18929970502395704 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 133516 23858 VWLRWFLWRLL True PC9_epitope_Rep4 1586.92380931498 1586.9221649037902 100.2 3 -0.6299080245653957 0.18929970502395704 1.0 ['ENST00000264649.10_1_17:40610912-40612943:+|nuORF'] 59464 8266 LFQEREHVLRL True NCI_RA007_Epitope_Rep3 1438.80448202794 1438.80283490379 39.64 3 -0.6299590185853348 0.18929970502395704 1.0 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 124197 6660 VGTAQGHIF True PC9_epitope_Rep3 928.4766655447999 928.47556993586 30.642 2 -0.629991501040897 0.18932796454099948 1.0 ['ENSG00000104142|ENST00000220509|VPS18', 'VPS18|p.D357Gfs*27|1|0.25|ENSG00000104142|chr15:40899884-40899885|-/G|frameshift_variant'] 129890 24848 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 103.07 1 -0.630070914498678 0.18935622317596568 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 94997 9561 RTRAFNVP True PC9_epitope_Rep2 959.5300980999898 959.52900993586 42.121 2 -0.6301231325775843 0.18936887446157688 1.0 ['ENST00000563229.5_1_15:74281313-74286901:-|nuORF', 'nc|ENSG00000067221|Q9UBI4-6|STOML1', 'nc|ENSG00000067221|Q9UBI4-5|STOML1', 'nc|ENSG00000067221|Q9UBI4-3|STOML1', 'ENSG00000067221|ENST00000541638|STOML1'] 13368 9781 DLWRHFRK True PC9_epitope_Rep2 1156.62539546716 1156.62373490379 42.96 3 -0.6302263668335852 0.18939417584818502 1.0 ['ENST00000563230.1_1_16:79123974-79135149:+|nuORF'] 84788 6467 QDWNTIDTSC True H1975_Epitope_Rep2 1181.46590273057 1181.46480993586 29.792 2 -0.6302295592691439 0.18939417584818502 1.0 ['ENST00000558807.1_1_15:73547133-73551321:+|nuORF'] 103204 9731 SPIRVTSP True PC9_epitope_Rep1 855.48141657207 855.48030993586 42.288 2 -0.6303194619967111 0.18945364315922533 1.0 ['CTNND2|p.G520Afs*36|1|0.15|ENSG00000169862|chr5:11346441-11346441|C/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'ENST00000507430.1_1_5:11364802-11385035:-|nuORF'] 73862 5237 NAQKSKDLKV True NCI_RA007_Epitope_Rep3 1129.64552177505 1129.6444299358602 27.605 2 -0.6303312339083904 0.1894633354660508 1.0 ['ENST00000563307.1_1_16:58197751-58197943:-|nuORF'] 129898 23376 VRSKGRKF True PC9_epitope_Rep6 976.5930327097199 976.5924849679301 103.02 1 -0.6303423132106787 0.1894633354660508 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 69205 10777 LTSLQTLKLS True NCI_RA007_Epitope_Rep1 1102.65977485686 1102.6586699358602 45.915 2 -0.6304354361965049 0.18947384845836973 1.0 ['ENSG00000178772|ENST00000323830|CPN2'] 122914 4320 VGHRATAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 23.668 2 -0.6304444233718041 0.18947384845836973 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 129899 23543 VRSKGRKF True PC9_epitope_Rep6 976.5930327097199 976.5924849679301 103.7 1 -0.6304578516074335 0.18947384845836973 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 83693 17193 PVFLCESW True PC9_epitope_Rep5 979.44733956247 979.44624993586 71.153 2 -0.630466917272319 0.18947384845836973 1.0 ['ENST00000250916.5_1_19:1852642-1853044:-|nuORF'] 86945 15662 QLVESGNPAL True PC9_epitope_Rep6 1026.53457434374 1026.53346993586 72.45 2 -0.6304838908753002 0.18947384845836973 1.0 ['GGNBP2|p.E112Q|1|0.07|ENSG00000278311|chr17:36557242-36557242|G/C|missense_variant', 'nc|ENSG00000278311|Q9H3C7-2|GGNBP2', 'nc|ENSG00000278311|Q9H3C7-3|GGNBP2', 'GGNBP2|p.S523Afs*23|1|0.05|ENSG00000278311|chr17:36586123-36586124|-/GCCTTCAG|frameshift_variant', 'ENSG00000278311|ENST00000613102|GGNBP2'] 57478 10568 LEDECFELK True NCI_RA007_Epitope_Rep1 1124.5059766374 1124.5048699358601 45.091 2 -0.6304926126641743 0.18947384845836973 1.0 ['ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 74676 6101 NGPNTSLAS True PC9_epitope_Rep3 859.40356017419 859.40246993586 28.514 2 -0.6304934432671891 0.18947384845836973 1.0 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000499453.2_1_19:19464952-19466588:+|nuORF', 'ENST00000262816.11_1_19:19463093-19466588:+|nuORF'] 129895 25557 VRSKGRKF True PC9_epitope_Rep3 976.5930327097199 976.5924849679301 103.79 1 -0.6305273856542362 0.18949322848405417 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 123177 13261 VGLAHSVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 56.282 2 -0.6305280758349043 0.18949322848405417 1.0 ['ENST00000574957.1_1_16:3075999-3076221:+|nuORF'] 34085 23945 GLWRRRELWFW True PC9_epitope_Rep5 1603.85243527987 1603.8513299358601 97.086 2 -0.6305432424165033 0.18949322848405417 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 106087 4419 STAVRHMAA True PC9_epitope_Rep5 942.4705346185399 942.46942993586 22.068 2 -0.6305578887232988 0.18949322848405417 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 38442 4529 HENNNGQAAF True NCI_RA007_Epitope_Rep4 1100.4635346618 1100.4624299358602 23.817 2 -0.6306933607541277 0.18954676651844918 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 125559 25437 VKKKARKTA True NCI_RA007_Epitope_Rep3 1028.6818477141198 1028.68127496793 109.96 1 -0.6307040737581495 0.18954676651844918 1.0 ['HIST1H1E|p.S27T|1|0.08|ENSG00000168298|chr6:26156469-26156469|T/A|missense_variant'] 83550 13225 PTWERRLRWE True NCI_RA007_Epitope_Rep1 1427.7422161245497 1427.74110993586 55.44 2 -0.6307080671889155 0.18954676651844918 1.0 ['ENST00000564526.1_1_16:85009951-85010841:-|nuORF', 'ENSG00000153786|ENST00000313732|ZDHHC7', 'nc|ENSG00000153786|Q9NXF8-2|ZDHHC7'] 58012 13252 LEHLKPTYWFS True H1975_Epitope_Rep3 1419.7186867153098 1419.7175899358601 56.23 2 -0.6307621429474647 0.18957582565014586 1.0 ['ENSG00000138231|ENST00000260803|DBR1', 'DBR1|p.T496Lfs*10|1|0.24|ENSG00000138231|chr3:138162039-138162039|C/-|frameshift_variant'] 74426 9002 NETKSEDLP True PC9_epitope_Rep1 1031.4771190372699 1031.4760299358602 39.474 2 -0.6307634042745976 0.18957582565014586 1.0 ['ENSG00000168497|ENST00000304141|CAVIN2'] 79607 8994 PDLAKILEE True NCI_RA007_Epitope_Rep5 1026.5597264624198 1026.5586299358602 41.253 2 -0.63077553599591 0.18957582565014586 1.0 ['ENSG00000166664|ENST00000299847|CHRFAM7A', 'ENSG00000175344|ENST00000306901|CHRNA7', 'nc|ENSG00000175344|P36544-2|CHRNA7'] 63549 21559 LMDFTIQI True PC9_epitope_Rep2 979.50485443859 979.50374993586 88.396 2 -0.6307882425458848 0.18957582565014586 1.0 ['ENST00000433049.5_1_5:139918555-139918624:+|nuORF'] 133924 15204 VYIHVESKL True PC9_epitope_Rep5 1086.60734536118 1086.6062499358602 63.491 2 -0.6307955181629891 0.18957582565014586 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 125560 26603 VKKKARKTA True NCI_RA007_Epitope_Rep5 1028.6818477141198 1028.68127496793 109.99 1 -0.6308344925146424 0.18957582565014586 1.0 ['HIST1H1E|p.S27T|1|0.08|ENSG00000168298|chr6:26156469-26156469|T/A|missense_variant'] 5399 7070 ALSSGSIAAI True H1975_Epitope_Rep3 888.4916469026 888.49054993586 32.162 2 -0.6308813949287341 0.18961671060636787 1.0 ['ENSG00000169116|ENST00000307428|PARM1'] 113104 11480 TLNVWPLYIC True NCI_RA007_Epitope_Rep1 1220.6263665535998 1220.6252699358602 48.619 2 -0.6309122322153625 0.18961671060636787 1.0 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'nc|ENSG00000170242|Q96K76-3|USP47', 'ENST00000305481.10_1_11:11973309-11977719:+|nuORF'] 69087 13765 LTRACPLPWAP True H1975_Epitope_Rep3 1223.6484989805099 1223.6474099358602 58.248 2 -0.6309734597932982 0.1896204782629042 1.0 ['ENST00000336314.8_2_5:154195475-154195619:+|nuORF'] 27609 8462 FNRLWFLLVR True NCI_RA007_Epitope_Rep4 1362.79246079226 1362.79081490379 39.357 3 -0.6310179322931465 0.1896204782629042 1.0 ['USP38|p.P324L|1|0.59|ENSG00000170185|chr4:143197845-143197845|C/T|missense_variant'] 116912 11103 TVFRYNRPP True H1975_Epitope_Rep1 1148.60907669668 1148.6079699358602 47.672 2 -0.6310200609440206 0.1896204782629042 1.0 ['nc|ENSG00000143382|Q6UY14-2|ADAMTSL4', 'ENSG00000143382|ENST00000271643|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-3|ADAMTSL4'] 102639 19411 SLWSLLVTL True PC9_epitope_Rep3 1030.60628273202 1030.6051899358602 79.89 2 -0.6310516072804445 0.1896204782629042 1.0 ['ENSG00000145248|ENST00000273861|SLC10A4'] 138128 19913 YGIENEVFL True PC9_epitope_Rep6 1082.52842633414 1082.5278749679298 89.25 1 -0.6310737318700026 0.18964360913982686 1.0 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 63208 11638 LLSCAPPP True PC9_epitope_Rep1 796.4153111582 796.41420993586 49.645 2 -0.6310857818981869 0.18964360913982686 1.0 ['SLC23A2|p.R403L|1|0.19|ENSG00000089057|chr20:4869948-4869948|C/A|missense_variant'] 119205 25078 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 103.96 1 -0.6311011764771354 0.18964360913982686 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 5345 11331 ALRPQLAP True PC9_epitope_Rep1 864.5181364339599 864.51702993586 48.464 2 -0.6311316238811834 0.18964360913982686 1.0 ['ENST00000395379.5_1_8:133787694-133790038:+|nuORF'] 112166 18733 TKDILINFL True PC9_epitope_Rep4 1075.62774645259 1075.62717496793 80.138 1 -0.6311319092807396 0.18964360913982686 1.0 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL', 'ENST00000463899.5_1_1:182781291-182795122:+|nuORF', 'nc|ENSG00000135838|Q9BXD5-4|NPL', 'nc|ENSG00000135838|Q9BXD5-3|NPL'] 119225 25128 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48628496793 105.28 1 -0.6311551450193366 0.18964360913982686 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 119214 25881 VAKRTLGG True PC9_epitope_Rep1 800.4868363056798 800.48628496793 104.66 1 -0.631163294916196 0.18964360913982686 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 3100 8309 AGAELLQRAP True H1975_Epitope_Rep3 1024.5665431783598 1024.5654499358602 36.945 2 -0.631190471078252 0.18964360913982686 1.0 ['ENST00000471864.1_1_9:38621862-38622117:+|nuORF', 'nc|ENSG00000204860|Q5SY85|FAM201A'] 119207 25247 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 104.64 1 -0.6312167148738902 0.18965624805040862 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 119208 25334 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 104.98 1 -0.6312744840722675 0.18968152468885494 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 102601 6288 SLWGGEVP True PC9_epitope_Rep1 843.41266830591 843.41156993586 29.0 2 -0.6312750830188811 0.18968152468885494 1.0 ['nc|ENSG00000261480|H3BSY2-2|GOLGA8M', 'nc|ENSG00000261480|H3BSY2-3|GOLGA8M'] 93806 16320 RRAPLGAA True H1975_Epitope_Rep1 810.4824196315799 810.48132993586 68.131 2 -0.6312908726810504 0.18969416241675635 1.0 ['ENST00000268893.10_1_17:56393882-56399727:-|nuORF'] 119209 25422 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 105.32 1 -0.6313322532706449 0.18971943669000796 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 117384 23810 TVPLDLLLVP True PC9_epitope_Rep2 1078.66379760814 1078.66327496793 97.055 1 -0.6313508219115321 0.18971943669000796 1.0 ['ENST00000501133.2_1_4:103749296-103764608:+|nuORF'] 82832 27159 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 113.89 3 -0.6313727508293543 0.18974766850690872 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 129396 18018 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 76.104 2 -0.6314133920681393 0.18978557504873295 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 73547 11338 MVQKYQSPV True H1975_Epitope_Rep3 1078.5481162329 1078.5470099358602 48.722 2 -0.6314157208826487 0.18978557504873295 1.0 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'ENST00000588696.5_1_17:75139678-75139750:+|nuORF'] 23123 3823 EVKARDREWKK True H1975_Epitope_Rep3 1443.7946456202296 1443.79300490379 19.804 3 -0.631419479024606 0.18978557504873295 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENST00000590205.2_2_19:13370376-13370586:-|nuORF'] 84566 12707 QAVLRKFDEL True PC9_epitope_Rep6 1217.67682190333 1217.67572993586 60.356 2 -0.631436118872281 0.18979820977450643 1.0 ['ENSG00000152939|ENST00000325631|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-3|MARVELD2'] 23283 5611 EVPYFNYNAKP True NCI_RA007_Epitope_Rep1 1340.6401020414396 1340.63845490379 25.889 3 -0.6315428617470029 0.18982347804391217 1.0 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 45785 12905 ISCCAKNR True PC9_epitope_Rep5 893.42114189797 893.42004993586 54.651 2 -0.6315529917059972 0.18982347804391217 1.0 ['TINAG|p.W432Gfs*23|1|0.18|ENSG00000137251|chr6:54380566-54380566|T/-|frameshift_variant', 'TINAG|p.G439Efs*16|1|0.18|ENSG00000137251|chr6:54389807-54389807|G/-|frameshift_variant', 'ENSG00000137251|ENST00000259782|TINAG'] 81898 6361 PLRYNIIMK True NCI_RA007_Epitope_Rep4 1146.65833538822 1146.65668490379 31.072 3 -0.6315815417893347 0.18984874473725247 1.0 ['OR9A2|p.N133K|1|0.11|ENSG00000179468|chr7:143026734-143026734|G/T|missense_variant'] 130230 20169 VSFDVFNCQF True PC9_epitope_Rep4 1204.5222954078797 1204.52118993586 85.717 2 -0.63160355150104 0.18984874473725247 1.0 ['ENST00000431461.1_1_6:110522811-110530492:+|nuORF'] 46238 10750 ISNIVWKYQ True H1975_Epitope_Rep1 1149.61824439805 1149.6171499358602 46.311 2 -0.6316318198752411 0.18985841701490674 1.0 ['ENSG00000092439|ENST00000646667|TRPM7'] 136385 11170 WTQMWNRPCR True PC9_epitope_Rep1 1376.623029592 1376.6219299358602 47.851 2 -0.6316591303601047 0.18985841701490674 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 55500 10553 LAGISRSATI True PC9_epitope_Rep1 987.57129420563 987.57018993586 45.482 2 -0.631696003111557 0.18988743022856966 1.0 ['ENSG00000111266|ENST00000298573|DUSP16', 'ENSG00000184545|ENST00000397374|DUSP8'] 16621 7608 EEPVFYISI True NCI_RA007_Epitope_Rep5 1095.54882742555 1095.5477299358602 35.961 2 -0.6317151647756912 0.18988743022856966 1.0 ['ENSG00000071991|ENST00000262150|CDH19'] 72569 19425 MLNVIFLGI True PC9_epitope_Rep2 1018.5885244928999 1018.58742993586 80.096 2 -0.6317171259590556 0.18988743022856966 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 140030 6596 YQEGQVSA True PC9_epitope_Rep2 880.3926611373199 880.39156993586 30.784 2 -0.6317261451475709 0.18988743022856966 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B'] 39301 7316 HIPVLPGK True PC9_epitope_Rep2 859.5279728416699 859.52686993586 33.525 2 -0.6317312592765373 0.18988743022856966 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 130100 3906 VSDPLDEEKKE True NCI_RA007_Epitope_Rep2 1287.6194261665098 1287.6183299358602 19.828 2 -0.6317562052076123 0.18988743022856966 1.0 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-4|RPGRIP1'] 116079 7612 TSQPSTSVP True H1975_Epitope_Rep3 902.4345259493 902.43342993586 34.26 2 -0.6317916594412686 0.18989710009354538 1.0 ['nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'ENST00000488149.5_1_3:182948954-183027611:-|nuORF', 'nc|ENSG00000053524|Q86YR7-3|MCF2L2'] 129854 23201 VRRRRGAPGR True PC9_epitope_Rep5 1179.7173387893897 1179.71569490379 94.224 3 -0.6317980546282892 0.18989710009354538 1.0 ['ENST00000444380.5_1_2:85828554-85829758:-|nuORF', 'ENST00000306353.7_2_2:85828206-85829758:-|nuORF'] 26570 8447 FIKQLGGG True NCI_RA007_Epitope_Rep1 818.4650382319398 818.46394993586 36.856 2 -0.6318400881737398 0.18990163525542098 1.0 ['SAMHD1|p.Y146F|1|0.17|ENSG00000101347|chr20:36935101-36935101|T/A|missense_variant'] 42617 9862 IEGQNNKL True PC9_epitope_Rep6 914.48214484806 914.48104993586 48.416 2 -0.6318744539445458 0.18990163525542098 1.0 ['ENSG00000024526|ENST00000456315|DEPDC1'] 118875 21046 VACALLVFCF True NCI_RA007_Epitope_Rep5 1084.5449454287598 1084.5438499358602 87.962 2 -0.6318800892213122 0.18990163525542098 1.0 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000552090.1_1_12:49167835-49170266:-|nuORF'] 101374 13456 SLKASCLYGQL True PC9_epitope_Rep5 1181.61144476545 1181.60980490379 56.774 3 -0.6318837583640562 0.18990163525542098 1.0 ['ENSG00000084207|ENST00000398606|GSTP1', 'GSTP1|p.K189Pfs*13|1|0.3|ENSG00000084207|chr11:67586505-67586506|-/CC|frameshift_variant', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF'] 119217 25937 VAKRTLGG True PC9_epitope_Rep2 800.4868363056798 800.48628496793 105.56 1 -0.6318851373842799 0.18990163525542098 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 30736 11990 GALKSILCLT True PC9_epitope_Rep1 1017.58925276889 1017.58814993586 50.982 2 -0.6319013475282947 0.18990163525542098 1.0 ['TAT|p.R333L|1|0.15|ENSG00000198650|chr16:71570312-71570312|C/A|missense_variant'] 13112 7357 DLQRRLFFFIR True NCI_RA007_Epitope_Rep4 1509.8568519539697 1509.85574993586 34.939 2 -0.6319016148048777 0.18990163525542098 1.0 ['ENST00000177742.7_1_16:1822507-1822845:-|nuORF'] 47441 9182 IVLYLTLCK True H1975_Epitope_Rep1 1064.63038930488 1064.62928993586 40.225 2 -0.6319146396507167 0.18990163525542098 1.0 ['nc|ENSG00000184619|Q6ZNG9|KRBA2', 'ENSG00000184619|ENST00000396267|KRBA2'] 101896 16964 SLPSIFGSHW True PC9_epitope_Rep1 1129.5556441414901 1129.55398490379 70.074 3 -0.6319253859482159 0.18990163525542098 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 1870 11643 AEIEDPPIP True NCI_RA007_Epitope_Rep3 979.4862271689899 979.48512993586 52.919 2 -0.6319380235744563 0.18990834268612047 1.0 ['SMARCC1|p.T1036Lfs*26|1|0.16|ENSG00000173473|chr3:47590776-47590776|G/-|frameshift_variant', 'ENSG00000173473|ENST00000254480|SMARCC1'] 119218 26008 VAKRTLGG True PC9_epitope_Rep2 800.4868363056798 800.48628496793 105.9 1 -0.6319429065826573 0.18990834268612047 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 94137 24936 RRMKKKRVVLR True H1975_Epitope_Rep3 1468.9612745361999 1468.9601699358602 103.73 2 -0.63195316863487 0.18990834268612047 1.0 ['ENSG00000170178|ENST00000406506|HOXD12'] 94138 25025 RRMKKKRVVLR True H1975_Epitope_Rep3 1468.9612745361999 1468.9601699358602 104.09 2 -0.6320143360213872 0.18991800978894535 1.0 ['ENSG00000170178|ENST00000406506|HOXD12'] 110245 3693 TERETERKKR True NCI_RA007_Epitope_Rep1 1331.7269599832296 1331.7253049037902 18.331 3 -0.6320445615663957 0.18991800978894535 1.0 ['ENST00000564646.1_1_16:89005738-89005978:-|nuORF'] 24564 6588 FAGSASSLH True NCI_RA007_Epitope_Rep1 875.4137309350701 875.41262993586 29.638 2 -0.632073220451115 0.18992767628904544 1.0 ['nc|ENSG00000156925|O60481-2|ZIC3', 'ENSG00000156925|ENST00000287538|ZIC3'] 102421 8086 SLTNRQVI True PC9_epitope_Rep2 929.52942939365 929.52832993586 36.46 2 -0.6320893915263256 0.18992767628904544 1.0 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 58932 9177 LETPPQPPP True H1975_Epitope_Rep2 974.5072969667399 974.50618993586 40.252 2 -0.6321065910447188 0.1899558894586717 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 74476 8956 NEYKRRKDL True H1975_Epitope_Rep3 1220.66256882152 1220.6614699358602 39.444 2 -0.6321722629842716 0.18998410174880764 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 82835 27409 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 115.25 3 -0.632209264765558 0.1899967268816534 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 139555 11616 YLTSVFHATA True NCI_RA007_Epitope_Rep4 1108.55530978832 1108.5542099358602 51.634 2 -0.6322983058479384 0.19002493765586034 1.0 ['ENST00000419794.1_1_9:34319275-34319650:+|nuORF'] 7136 13003 AQWRGEERPR True NCI_RA007_Epitope_Rep5 1283.6483157397097 1283.64667490379 56.694 3 -0.6323322772349225 0.19003756175870076 1.0 ['ENST00000545897.5_1_1:161200091-161200277:+|nuORF'] 81668 12466 PLLPMEQLIVP True H1975_Epitope_Rep1 1248.715181558 1248.71408993586 52.988 2 -0.6323694099836574 0.190044261579702 1.0 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant'] 47673 9259 IWRYFHDTLLR True NCI_RA007_Epitope_Rep1 1518.8095674083797 1518.80791490379 40.012 3 -0.6324008605603866 0.190044261579702 1.0 ['ENSG00000197594|ENST00000647893|ENPP1'] 64437 17176 LPNRKCFLT True PC9_epitope_Rep5 1090.59573513166 1090.5946299358602 71.09 2 -0.6324054860609425 0.190044261579702 1.0 ['nc|ENSG00000163219|P42331-5|ARHGAP25', 'nc|ENSG00000163219|P42331-3|ARHGAP25', 'nc|ENSG00000163219|P42331-6|ARHGAP25', 'nc|ENSG00000163219|P42331|ARHGAP25', 'ENSG00000163219|ENST00000409202|ARHGAP25'] 39566 11391 HLGVPISI True H1975_Epitope_Rep1 834.4963383602201 834.49524993586 48.794 2 -0.6325045635289899 0.19008805423517494 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 75643 10059 NLEKTYRLKK True H1975_Epitope_Rep3 1291.7612202336297 1291.76012993586 43.73 2 -0.6325947868600732 0.19020383992020945 1.0 ['ENST00000524045.6_1_8:106797143-106799334:-|nuORF'] 85689 17219 QGTWFWQI True PC9_epitope_Rep5 1064.5079656730798 1064.50686993586 71.253 2 -0.6326245990104622 0.19020383992020945 1.0 ['ENST00000527754.1_1_11:129698120-129727360:+|nuORF', 'ENSG00000151715|ENST00000281441|TMEM45B'] 64075 5055 LPAVKMAP True NCI_RA007_Epitope_Rep1 825.4782457679299 825.47714993586 23.747 2 -0.6326579831079665 0.19020383992020945 1.0 ['ENST00000361611.10_1_14:23504170-23504263:-|nuORF'] 136574 5852 WWHRDSLWDRR True NCI_RA007_Epitope_Rep3 1611.7807268915897 1611.7790849037901 29.996 3 -0.632708508668421 0.19021645966120712 1.0 ['ENST00000511866.6_1_4:16191890-16198306:-|nuORF'] 124621 4268 VGWGRAHRDA True NCI_RA007_Epitope_Rep5 1123.56352348659 1123.56187490379 22.99 3 -0.6327272034816657 0.19025431652434083 1.0 ['ENST00000393721.5_2_X:153172840-153173077:-|nuORF'] 11699 15183 DGYFGGARV True PC9_epitope_Rep5 940.4402800360798 940.43918993586 63.409 2 -0.6327318113300973 0.19025431652434083 1.0 ['ENSG00000044446|ENST00000379942|PHKA2', 'PHKA2|p.Q1025Pfs*38|1|0.65|ENSG00000044446|chrX:18899215-18899216|-/A|frameshift_variant', 'nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 136746 14661 WYKSKFANL True PC9_epitope_Rep1 1155.6076797143498 1155.60604490379 61.215 3 -0.6327463123294104 0.19025431652434083 1.0 ['ENSG00000148798|ENST00000369849|INA'] 57400 14946 LEAQPQSTV True PC9_epitope_Rep2 971.49237517859 971.49126993586 62.75 2 -0.6328054387796694 0.19026100506427737 1.0 ['ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'ENST00000466142.1_1_2:170488267-170492739:+|nuORF', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant'] 67152 8263 LSQRSEVL True PC9_epitope_Rep1 930.5134449763399 930.51234993586 36.618 2 -0.6328110204106746 0.19026100506427737 1.0 ['nc|ENSG00000170909|Q8IYS5-2|OSCAR', 'ENSG00000170909|ENST00000358375|OSCAR', 'nc|ENSG00000170909|Q8IYS5-3|OSCAR', 'nc|ENSG00000170909|Q8IYS5-5|OSCAR', 'nc|ENSG00000170909|Q8IYS5|OSCAR', 'nc|ENSG00000170909|Q8IYS5-7|OSCAR', 'nc|ENSG00000170909|Q8IYS5-6|OSCAR', 'nc|ENSG00000170909|Q8IYS5-4|OSCAR'] 128827 14962 VQAVVPRGL True PC9_epitope_Rep3 937.5709002828098 937.56980993586 62.682 2 -0.6328165906545706 0.19026100506427737 1.0 ['ENST00000478371.1_1_9:123629171-123630543:-|nuORF', 'ENST00000419155.5_1_9:123629171-123631115:-|nuORF'] 81596 20590 PLKYLDTP True PC9_epitope_Rep4 945.5171333744499 945.51658496793 87.352 1 -0.6328557812201108 0.19028623961855493 1.0 ['TET3|p.K1103Rfs*79|1|0.42|ENSG00000187605|chr2:74099315-74099315|A/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 121143 17688 VERWLKPA True PC9_epitope_Rep1 997.5709002828098 997.56980993586 72.831 2 -0.6328887830876072 0.19028623961855493 1.0 ['nc|ENSG00000197948|Q86WN1-3|FCHSD1', 'ENSG00000197948|ENST00000435817|FCHSD1', 'nc|ENSG00000197948|Q86WN1-2|FCHSD1'] 63104 18349 LLQTDELNQ True PC9_epitope_Rep4 1072.540053647 1072.53894993586 78.646 2 -0.6329262560559283 0.1902988563058992 1.0 ['ENSG00000118492|ENST00000397944|ADGB', 'nc|ENSG00000118492|Q8N7X0-2|ADGB'] 64111 10847 LPDYFPERSR True PC9_epitope_Rep5 1278.6356853673399 1278.63403490379 46.711 3 -0.6329879309816716 0.19032705402078562 1.0 ['ENSG00000178695|ENST00000377474|KCTD12'] 82837 27661 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 116.61 3 -0.6330457787017619 0.19036786587931007 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 11402 5619 DESYDYWCE True H1975_Epitope_Rep3 1208.39682011124 1208.3957299358601 26.65 2 -0.6330565813266386 0.19036786587931007 1.0 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 57297 5407 LEAAGDKF True NCI_RA007_Epitope_Rep5 849.42323298961 849.42212993586 27.485 2 -0.633112058364845 0.1903804805085538 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 69801 6579 LVGGFSCS True H1975_Epitope_Rep3 768.3476255212 768.3470749679301 30.261 1 -0.6331616705037857 0.1903901283809049 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 355 5889 AAKCYFLRKAK True NCI_RA007_Epitope_Rep5 1297.73289731081 1297.73125490379 29.34 3 -0.6331655202729144 0.1903901283809049 1.0 ['nc|ENSG00000261371|P16284-5|PECAM1', 'nc|ENSG00000261371|P16284-3|PECAM1', 'nc|ENSG00000261371|P16284-4|PECAM1', 'nc|ENSG00000261371|P16284-2|PECAM1', 'nc|ENSG00000261371|P16284-6|PECAM1', 'ENSG00000261371|ENST00000563924|PECAM1'] 25528 21026 FEIFKEHFS True PC9_epitope_Rep1 1182.5709598524597 1182.5698699358602 85.704 2 -0.6331898318292871 0.19040274207369323 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 59703 4557 LGASIKYDAVK True NCI_RA007_Epitope_Rep2 1163.6550238295897 1163.6533649037901 22.355 3 -0.6331955731350727 0.19040348964013087 1.0 ['VPS13C|p.P92L|1|0.13|ENSG00000129003|chr15:62034965-62034965|G/A|missense_variant'] 102556 18154 SLVTPIYYVF True NCI_RA007_Epitope_Rep3 1200.6430621635602 1200.64141490379 79.53 3 -0.6331972055479255 0.19040348964013087 1.0 ['ENSG00000163293|ENST00000295461|NIPAL1'] 127924 15164 VPGVAVAEP True PC9_epitope_Rep1 837.45961849833 837.45852993586 63.15 2 -0.6332017642426718 0.19040348964013087 1.0 ['ENST00000337288.9_2_2:96874364-96874412:-|nuORF'] 109003 5943 TAGWWRWAVAP True NCI_RA007_Epitope_Rep4 1299.6512758618298 1299.6496349037902 29.479 3 -0.6332022860026179 0.19040348964013087 1.0 ['ENST00000335464.9_1_17:72835313-72835379:+|nuORF'] 102296 11682 SLSNKNLNI True PC9_epitope_Rep5 1001.5505587610501 1001.54946993586 49.931 2 -0.6332135055754768 0.19040348964013087 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 97592 7828 SEETYQVP True H1975_Epitope_Rep2 951.41854153199 951.41744993586 35.059 2 -0.6332831827109531 0.19044725896153666 1.0 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant', 'nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4', 'nc|ENSG00000087589|Q9NQ75-3|CASS4'] 72143 12687 MFVFKERWFWR True NCI_RA007_Epitope_Rep1 1630.8231092975398 1630.82200993586 53.333 2 -0.6333390088750508 0.1904598703888335 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 131875 9275 VTRISNDL True PC9_epitope_Rep3 916.4977949122 916.49668993586 40.619 2 -0.6333726078395291 0.19046358028537605 1.0 ['ENSG00000007047|ENST00000262891|MARK4'] 22824 7479 EVAFRKFK True H1975_Epitope_Rep3 1023.5865503469498 1023.5854499358601 33.748 2 -0.633390832225627 0.19046358028537605 1.0 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000493479.1_1_4:153472952-153473506:-|nuORF', 'ENST00000443616.1_1_1:119669641-119669854:-|nuORF', 'RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 1773 10665 AEGVLHHLHR True H1975_Epitope_Rep3 1167.6261237431502 1167.62502993586 46.097 2 -0.6333949308251224 0.19046358028537605 1.0 ['nc|ENSG00000196715|Q8N0U8-2|VKORC1L1'] 30808 6360 GANTSRKP True PC9_epitope_Rep3 829.44061438925 829.43950993586 29.49 2 -0.6334012273453407 0.19046358028537605 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A', 'nc|ENSG00000169302|Q8WU08-2|STK32A'] 44670 4626 ILSSSTSMQ True NCI_RA007_Epitope_Rep2 952.45354714172 952.45244993586 22.619 2 -0.6334379510288362 0.19047322346490544 1.0 ['ENST00000546388.1_1_12:56708731-56708785:-|nuORF'] 82851 28435 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 117.67 3 -0.6334455959157801 0.19047322346490544 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 42223 20857 IDSIHLLLSP True PC9_epitope_Rep5 1106.63356010902 1106.6324699358602 85.277 2 -0.6334693974756668 0.19048583311266531 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ATG2B|p.E1224Dfs*7|1|0.12|ENSG00000066739|chr14:96313406-96313407|-/A|frameshift_variant'] 36351 9427 GVESALHKYTL True PC9_epitope_Rep5 1216.6451874218799 1216.6435349037902 41.216 3 -0.6335042363925849 0.1905140186915888 1.0 ['ENST00000546954.1_1_12:120882345-120882465:-|nuORF'] 129388 17310 VRELRGLG True NCI_RA007_Epitope_Rep1 898.5348491272598 898.53374993586 71.465 2 -0.6335486294644065 0.1905333001059124 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 5919 15621 APGQRVLVL True PC9_epitope_Rep5 951.5865503469498 951.58544993586 65.097 2 -0.633569421454565 0.1905333001059124 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 46937 10265 ITNYKDLR True PC9_epitope_Rep6 1021.5556441414899 1021.55454993586 50.164 2 -0.6336334364067031 0.1905333001059124 1.0 ['ENSG00000131459|ENST00000253778|GFPT2'] 126665 11805 VLNVCETL True NCI_RA007_Epitope_Rep3 889.45790424617 889.45680993586 53.552 2 -0.6336614080011205 0.1905333001059124 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF', 'ENST00000487952.1_1_9:131761928-131764086:+|nuORF'] 44132 16059 IIRKPDTL True PC9_epitope_Rep2 954.5862159937799 954.58510993586 67.026 2 -0.6337285574715524 0.1905866961546249 1.0 ['EPHB6|p.M919I|1|0.16|ENSG00000106123|chr7:142870360-142870360|G/C|missense_variant'] 137282 4180 YCRRWRYWEYW True NCI_RA007_Epitope_Rep5 1765.7936000744096 1765.79194490379 22.605 3 -0.6337457723590271 0.1905866961546249 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 8263 5689 ATHSRWPYR True H1975_Epitope_Rep2 1172.5839245779998 1172.58226490379 26.881 3 -0.6337581322896779 0.1905866961546249 1.0 ['ENST00000541562.5_2_6:30882981-30883968:+|nuORF'] 11615 24409 DGGWCWGC True PC9_epitope_Rep1 882.2788943383799 882.27778993586 98.731 2 -0.6337803561835398 0.19061190798797675 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 42621 9927 IEGRRSEACP True NCI_RA007_Epitope_Rep2 1116.53459142708 1116.5334899358602 43.24 2 -0.6338257522039376 0.19061190798797675 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 2361 4270 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 21.541 2 -0.6339206050741202 0.19062451331568292 1.0 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 44731 10869 ILWGHRYEAV True PC9_epitope_Rep3 1242.6509415086603 1242.6493049037902 46.785 3 -0.633925374292251 0.1906252433232111 1.0 ['KCNJ2|p.P328A|1|0.37|ENSG00000123700|chr17:70176021-70176021|C/G|missense_variant'] 127979 11331 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 48.579 2 -0.6339331074963555 0.1906252433232111 1.0 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 122091 15610 VGAALQASV True PC9_epitope_Rep6 814.45486747106 814.45376993586 72.249 2 -0.6339487789719829 0.1906252433232111 1.0 ['ENSG00000007520|ENST00000007390|TSR3'] 12345 15601 DIRFYMYELLK True NCI_RA007_Epitope_Rep1 1489.7639226555696 1489.76282993586 64.774 2 -0.633961428099504 0.1906252433232111 1.0 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 10666 10669 CPRPGGCL True PC9_epitope_Rep2 801.3625643926899 801.36146993586 46.351 2 -0.6339624590133754 0.1906252433232111 1.0 ['ENST00000519604.5_1_20:61920746-61920884:+|nuORF'] 47786 6789 IYFFYNCQYSS True H1975_Epitope_Rep1 1433.59618862413 1433.5950899358602 31.157 2 -0.6339834372991081 0.190637847265479 1.0 ['ENST00000373864.5_1_1:28339722-28384581:-|nuORF'] 60170 9847 LGNVYFEK True H1975_Epitope_Rep1 968.4967322830399 968.49562993586 42.808 2 -0.6340216033822038 0.1906541473972688 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant'] 46253 14208 ISNWNQQI True PC9_epitope_Rep1 1001.4930438849299 1001.49194993586 59.474 2 -0.6340537193260247 0.1906541473972688 1.0 ['nc|ENSG00000163072|Q8IVI9-3|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-2|NOSTRIN', 'ENSG00000163072|ENST00000317647|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-4|NOSTRIN'] 139741 12851 YPADKISI True H1975_Epitope_Rep1 905.4858332461699 905.48472993586 54.5 2 -0.6340549016232457 0.1906541473972688 1.0 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35148995-35166226:-|nuORF'] 82853 28619 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 118.69 3 -0.6340729813679329 0.1906541473972688 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 47572 8314 IVVGASDGIIR True H1975_Epitope_Rep3 1098.6397081186199 1098.6386099358601 36.963 2 -0.6340993962516609 0.1906541473972688 1.0 ['ENSG00000137055|ENST00000397292|PLAA'] 18294 6630 EIRRCLYYFYK True H1975_Epitope_Rep3 1552.78605508248 1552.7849499358601 30.456 2 -0.6341532225923024 0.19069789168820653 1.0 ['ENSG00000147896|ENST00000276943|IFNK'] 64113 8087 LPEALLPF True NCI_RA007_Epitope_Rep5 898.5164050984599 898.51530993586 37.796 2 -0.634214071897632 0.1907230941704036 1.0 ['ENST00000576846.1_1_17:7530278-7530680:-|nuORF'] 111751 6671 TIIGNVVI True H1975_Epitope_Rep2 827.51165407119 827.51054993586 30.569 2 -0.6342151448171215 0.1907230941704036 1.0 ['OR11L1|p.C36F|1|0.1|ENSG00000197591|chr1:247841790-247841790|C/A|missense_variant', 'OR11L1|p.L213Sfs*57|1|0.17|ENSG00000197591|chr1:247841260-247841261|-/A|frameshift_variant', 'ENSG00000197591|ENST00000355784|OR11L1'] 130696 10811 VSTVNERFDV True NCI_RA007_Epitope_Rep4 1164.57750178488 1164.57640993586 48.433 2 -0.6343066793261027 0.1907824056052939 1.0 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'MTMR11|p.G424Efs*52|1|0.33|ENSG00000014914|chr1:149931279-149931279|C/-|frameshift_variant', 'ENST00000479272.1_1_1:149906082-149907243:-|nuORF', 'nc|ENSG00000014914|A4FU01-3|MTMR11', 'ENST00000466496.5_1_1:149902724-149908701:-|nuORF', 'nc|ENSG00000014914|A4FU01-2|MTMR11', 'ENST00000492824.5_1_1:149905714-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-5|MTMR11', 'ENST00000482343.5_1_1:149902724-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-6|MTMR11'] 107012 18871 SVFFYVVT True PC9_epitope_Rep1 960.4956696538799 960.49456993586 77.372 2 -0.6343679275882317 0.19080463349318055 1.0 ['MOGS|p.L205V|1|0.26|ENSG00000115275|chr2:74463353-74463353|G/C|missense_variant'] 74677 6224 NGPNTSLAS True PC9_epitope_Rep5 859.40356017419 859.40246993586 28.92 2 -0.6343775655776074 0.19080463349318055 1.0 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000499453.2_1_19:19464952-19466588:+|nuORF', 'ENST00000262816.11_1_19:19463093-19466588:+|nuORF'] 22498 9457 ETFTALSVLG True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 41.344 2 -0.6345001535530456 0.19080463349318055 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB'] 110021 18216 TEKEVEIL True PC9_epitope_Rep1 959.5175272972698 959.51642993586 74.859 2 -0.6345704061445309 0.19084837067368324 1.0 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 59045 7737 LEVRSFRSV True PC9_epitope_Rep2 1091.60874234351 1091.60764993586 35.135 2 -0.6345900245943126 0.1908765374435622 1.0 ['ENST00000396403.8_1_19:53996005-53996560:+|nuORF'] 55142 6604 LAAEQVAR True PC9_epitope_Rep1 856.4766655447999 856.47556993586 30.205 2 -0.6346304012605551 0.1909047033363952 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF'] 129395 17625 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 74.577 2 -0.6346457839383955 0.19091729978826752 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 82855 28805 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 119.73 3 -0.6347126684956182 0.19092989584792863 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 70065 18159 LVNGERDLL True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 77.912 2 -0.6347542382987135 0.19095508679069043 1.0 ['ENST00000529460.1_1_11:118272380-118277657:+|nuORF'] 36097 10433 GVAGEAVFI True H1975_Epitope_Rep1 861.45961849833 861.4590749679301 45.084 1 -0.6347733764903364 0.19095508679069043 1.0 ['ENST00000487921.5_1_17:56769962-56783250:+|nuORF', 'ENST00000475762.5_1_17:56772326-56801433:+|nuORF', 'ENSG00000108384|ENST00000337432|RAD51C'] 35440 7747 GSGQLHYSVP True H1975_Epitope_Rep2 1043.5036085686302 1043.5025099358602 34.752 2 -0.6348174245103576 0.19098324926832305 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'PCDHA9|p.F395Lfs*89|1|0.1|ENSG00000204961|chr5:140849673-140849674|-/G|frameshift_variant', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9'] 112447 9045 TLDDVPSAAPQ True H1975_Epitope_Rep3 1112.5349682665599 1112.5338699358601 39.779 2 -0.6348192561599417 0.1909958435169762 1.0 ['ENSG00000103742|ENST00000352385|IGDCC4', 'ENST00000559327.1_1_15:65676349-65688574:-|nuORF', 'nc|ENSG00000103742|Q8TDY8-2|IGDCC4'] 29679 13968 FVLKKRTFTKG True H1975_Epitope_Rep1 1323.8026911227896 1323.8015899358602 58.886 2 -0.6348588364136412 0.19103957159313803 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'ENST00000493438.5_1_9:135973976-135976008:-|nuORF'] 55939 4026 LARHGSAI True PC9_epitope_Rep6 823.46643521427 823.46532993586 22.302 2 -0.6349163105273792 0.19105216457292298 1.0 ['PLEKHG3|p.T658I|1|0.29|ENSG00000126822|chr14:64741490-64741490|C/T|missense_variant'] 121494 12319 VEYQNKKFHNR True H1975_Epitope_Rep3 1461.7476954278097 1461.7465899358601 52.568 2 -0.6349876989037196 0.1910929157391697 1.0 ['ENST00000492424.1_1_20:17487687-17492707:-|nuORF'] 132010 6492 VTSRLIHS True NCI_RA007_Epitope_Rep2 911.5188647099501 911.51776993586 29.863 2 -0.6349953523910172 0.1910929157391697 1.0 ['nc|ENSG00000116852|O75037-3|KIF21B', 'ENSG00000116852|ENST00000461742|KIF21B', 'nc|ENSG00000116852|O75037-2|KIF21B', 'nc|ENSG00000116852|O75037|KIF21B'] 114974 8411 TQYLHITEAEE True H1975_Epitope_Rep3 1332.61976051968 1332.61866993586 37.337 2 -0.6350543311003298 0.1911677718626444 1.0 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'ENST00000523243.5_1_8:135490727-135577256:-|nuORF', 'EFR3A-ZFAT|2|fusion'] 129393 16708 VRELRGLG True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 73.538 2 -0.6350844638319647 0.19117441045995798 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 128669 10656 VPVPHTTALS True PC9_epitope_Rep5 1020.56039516876 1020.55928993586 45.977 2 -0.6350865932476574 0.19117441045995798 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 35448 7579 GSGVGTVRL True H1975_Epitope_Rep2 844.4766655447999 844.47556993586 34.104 2 -0.6351162339980371 0.19117441045995798 1.0 ['WDR91|p.D718Pfs*28|1|0.1|ENSG00000105875|chr7:135186243-135186244|-/CACGGTGACCACAGGGG|frameshift_variant', 'nc|ENSG00000105875|A4D1P6-2|WDR91', 'WDR91|p.E606Rfs*77|1|0.26|ENSG00000105875|chr7:135188498-135188498|C/-|frameshift_variant', 'ENSG00000105875|ENST00000354475|WDR91'] 135200 8918 WESGAGPG True PC9_epitope_Rep5 759.3187679210698 759.31766993586 39.247 2 -0.635161156903636 0.1912025651402422 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 136512 25577 WVVRLGGRG True PC9_epitope_Rep3 998.5773826455797 998.57628993586 103.87 2 -0.6351847569704334 0.19120622568093384 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 16872 5719 EFHDLFENMHK True NCI_RA007_Epitope_Rep4 1445.63978477161 1445.63812490379 28.612 3 -0.6351897869904177 0.19120622568093384 1.0 ['TADA2B|p.D272H|1|0.17|ENSG00000173011|chr4:7054605-7054605|G/C|missense_variant'] 136509 25098 WVVRLGGRG True NCI_RA007_Epitope_Rep1 998.5773826455797 998.57628993586 103.87 2 -0.6352056531359038 0.19120622568093384 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 7360 24322 ARRLWLLWALW True PC9_epitope_Rep4 1482.86120905842 1482.86010993586 102.04 2 -0.6352100473135514 0.19120622568093384 1.0 ['ENST00000216264.12_1_22:47081202-47081484:-|nuORF'] 124400 21906 VGVDEEIVYAK True NCI_RA007_Epitope_Rep1 1220.6288686513997 1220.6277699358602 89.697 2 -0.6352472536827926 0.19123437767505563 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.S138Kfs*9|1|0.03|ENSG00000092201|chr14:21370403-21370406|TTGC/-|frameshift_variant', 'SUPT16H|p.D140Vfs*9|1|0.04|ENSG00000092201|chr14:21370400-21370401|-/CA|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 114558 6487 TQDAESIHY True H1975_Epitope_Rep3 1062.4618033263 1062.46127496793 29.921 1 -0.6353022488580553 0.1912535989417166 1.0 ['ENST00000498831.1_1_3:183854405-183855259:+|nuORF'] 70704 7389 LWPCWWERRYK True H1975_Epitope_Rep3 1621.79762282569 1621.7959649037903 33.4 3 -0.6353157297662901 0.1912535989417166 1.0 ['ENST00000492991.5_1_9:132595938-132597442:-|nuORF'] 83256 5845 PSYSSRTPG True PC9_epitope_Rep2 950.4457593393399 950.44466993586 27.878 2 -0.6353177454085895 0.1912535989417166 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 75273 9029 NIIKKINVT True NCI_RA007_Epitope_Rep3 1041.65462990677 1041.6535299358602 42.611 2 -0.635324733558301 0.1912535989417166 1.0 ['ENSG00000165935|ENST00000535986|SMCO2'] 66526 9149 LSHPWTHSVP True H1975_Epitope_Rep1 1159.5774422152301 1159.5763499358602 40.098 2 -0.6354219477652285 0.19128174800796813 1.0 ['ENST00000497543.5_1_3:75471596-75471728:-|nuORF'] 117348 23131 TVPDLLLPL True PC9_epitope_Rep3 979.59538369515 979.59428993586 94.241 2 -0.6354665757881468 0.19129135671822964 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 137895 7123 YEWNEWELRRK True H1975_Epitope_Rep3 1607.7844748593495 1607.78281490379 32.369 3 -0.6354941194980376 0.19129135671822964 1.0 ['ENST00000489338.6_1_6:88125312-88173965:+|nuORF', 'ENSG00000272514|ENST00000369562|CFAP206', 'ENST00000513191.1_1_6:88146506-88173965:+|nuORF'] 4763 4868 ALDSAWTAA True H1975_Epitope_Rep1 904.42904664604 904.4279499358599 23.803 2 -0.6355111902902236 0.19130394186028415 1.0 ['ENSG00000004848|ENST00000379044|ARX'] 87041 18418 QNDNAPEIL True PC9_epitope_Rep4 1012.48253877088 1012.48144993586 78.912 2 -0.6355212148389359 0.19131057234446486 1.0 ['nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1', 'ENSG00000204956|ENST00000517417|PCDHGA1', 'PCDHGA9|p.P565R|1|0.42|ENSG00000261934|chr5:141404646-141404646|C/G|missense_variant', 'PCDHGA3|p.P565S|1|0.15|ENSG00000254245|chr5:141345726-141345726|C/T|missense_variant', 'PCDHGA2|p.P565S|1|0.11|ENSG00000081853|chr5:141340664-141340664|C/T|missense_variant', 'PCDHGA2|p.D554E|1|0.09|ENSG00000081853|chr5:141340633-141340633|C/G|missense_variant', 'PCDHGA10|p.G735Afs*2|1|0.86|ENSG00000253846|chr5:141415377-141415377|C/-|frameshift_variant', 'PCDHGA2|p.H755Tfs*32|1|0.3|ENSG00000081853|chr5:141341233-141341234|-/A|frameshift_variant', 'nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6', 'nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2', 'nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9', 'nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10', 'ENSG00000261934|ENST00000573521|PCDHGA9', 'ENSG00000253731|ENST00000517434|PCDHGA6', 'ENSG00000253846|ENST00000398610|PCDHGA10', 'nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11', 'nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11', 'ENSG00000253873|ENST00000398587|PCDHGA11', 'ENSG00000081853|ENST00000394576|PCDHGA2', 'PCDHGA3|p.L732Ffs*55|1|0.3|ENSG00000254245|chr5:141346226-141346227|-/T|frameshift_variant', 'nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3', 'ENSG00000254245|ENST00000253812|PCDHGA3', 'nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8', 'ENSG00000253767|ENST00000398604|PCDHGA8', 'PCDHGA12|p.R718Afs*15|1|0.68|ENSG00000253159|chr5:141432909-141432909|G/-|frameshift_variant', 'nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12'] 48432 18943 IYWWILLCI True PC9_epitope_Rep5 1221.6620237863299 1221.6609299358602 77.888 2 -0.6355365075342875 0.19131057234446486 1.0 ['nc|ENSG00000144339|Q9UIK5-3|TMEFF2'] 128031 5960 VPKHQCGRC True PC9_epitope_Rep3 1026.4851391368597 1026.4840499358602 27.982 2 -0.635540646871398 0.19131057234446486 1.0 ['nc|ENSG00000180329|Q96MW1-2|CCDC43'] 18659 20583 ELAAQIIQEED True PC9_epitope_Rep2 1257.60886148281 1257.60776993586 84.605 2 -0.635577141265706 0.19131720220960088 1.0 ['ENST00000473758.5_1_14:23533663-23536544:-|nuORF'] 94813 3911 RSRDRYWEKSN True PC9_epitope_Rep3 1495.7280226123896 1495.72636490379 20.149 3 -0.6356101656185673 0.19131720220960088 1.0 ['nc|ENSG00000173068|Q6ZN30-2|BNC2'] 67129 8490 LSQLSVTDV True PC9_epitope_Rep4 960.5127762699999 960.51166993586 40.13 2 -0.6356114420539732 0.19131720220960088 1.0 ['nc|ENSG00000248290|Q16473|TNXA', 'ENST00000507684.1_1_6:31978569-31980175:-|nuORF', 'nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'nc|ENSG00000168477|P22105-2|TNXB'] 99206 8217 SHLNQSPASL True PC9_epitope_Rep2 1052.5250722892001 1052.5239699358601 36.964 2 -0.6356339904000117 0.19132978557868857 1.0 ['nc|ENSG00000165588|P32243|OTX2', 'ENSG00000165588|ENST00000672264|OTX2'] 71532 384 MACGCDCDCNH True NCI_RA007_Epitope_Rep1 1170.30209158806 1170.3004349037901 2.0459 3 -0.6357103197759194 0.19135197373539342 1.0 ['ENST00000451025.6_2_6:43608345-43608465:+|nuORF'] 63351 6997 LLTPSDLDP True NCI_RA007_Epitope_Rep1 969.5018772331299 969.50078993586 31.215 2 -0.6357183096582278 0.19135197373539342 1.0 ['ENSG00000187266|ENST00000222139|EPOR', 'nc|ENSG00000187266|P19235-3|EPOR'] 78007 12521 NVPQNDPVT True PC9_epitope_Rep3 982.4719740871799 982.47086993586 53.187 2 -0.6357512064063601 0.19135197373539342 1.0 ['ENSG00000163563|ENST00000368141|MNDA'] 138096 6740 YGGLRGAI True PC9_epitope_Rep2 805.4446371405298 805.44354993586 31.333 2 -0.6357829282502153 0.19136455578030184 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 142581 8708 YYLRSRQRRQP True NCI_RA007_Epitope_Rep1 1521.8276770840098 1521.82603490379 37.875 3 -0.6357925473380883 0.19139269655054378 1.0 ['nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1', 'ENSG00000143337|ENST00000606911|TOR1AIP1', 'nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1'] 69398 8203 LTWKRWRRCWE True NCI_RA007_Epitope_Rep2 1618.8303199362997 1618.82866490379 36.544 3 -0.6358402779883625 0.1914052775703261 1.0 ['ENST00000415950.4_2_19:35528037-35528250:+|nuORF'] 48978 8557 KEFDGKSLVSV True NCI_RA007_Epitope_Rep4 1207.6448530687098 1207.6437499358601 39.701 2 -0.6359229295042916 0.19143043843544824 1.0 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000517330.1_1_5:77337712-77337985:-|nuORF', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 66600 14591 LSITMGCTAL True H1975_Epitope_Rep3 1008.49838915916 1008.49728993586 61.493 2 -0.635931006189957 0.19143043843544824 1.0 ['nc|ENSG00000157703|Q8N434-2|SVOPL', 'ENSG00000157703|ENST00000674285|SVOPL'] 111752 13450 TIIHLTAL True PC9_epitope_Rep2 880.5382031722 880.53710993586 57.015 2 -0.6360215094046777 0.191486713547825 1.0 ['CALCRL|p.V198L|1|0.22|ENSG00000064989|chr2:187363411-187363411|C/A|missense_variant'] 18261 12021 EIQNQTLP True PC9_epitope_Rep5 941.4818104948899 941.48070993586 51.234 2 -0.6360260888835414 0.191486713547825 1.0 ['ENSG00000124275|ENST00000440940|MTRR', 'nc|ENSG00000124275|Q9UBK8-1|MTRR'] 110164 20628 TEPLWKAAV True PC9_epitope_Rep5 1013.5545815123298 1013.55348993586 84.396 2 -0.6360707190305102 0.19148737574088767 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'DYNC2H1|p.G2197Wfs*36|1|0.44|ENSG00000187240|chr11:103185004-103185005|-/T|frameshift_variant', 'nc|ENSG00000187240|Q8NCM8-3|DYNC2H1'] 126218 19119 VLGKALYLI True PC9_epitope_Rep1 988.63210355704 988.63100993586 78.331 2 -0.6361010286866617 0.19148737574088767 1.0 ['nc|ENSG00000132640|Q9Y2F9-2|BTBD3', 'ENSG00000132640|ENST00000378226|BTBD3'] 121148 11193 VERYLEEFP True PC9_epitope_Rep1 1180.57643915572 1180.57480490379 47.936 3 -0.6361057580901377 0.19148737574088767 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 79563 8834 PDERSLYIM True PC9_epitope_Rep5 1122.5379454720198 1122.5362949037901 38.926 3 -0.6361073918077471 0.19148737574088767 1.0 ['ENSG00000177519|ENST00000325926|RPRM'] 12457 9822 DIYHLAFLG True H1975_Epitope_Rep2 1047.53893144819 1047.5378299358601 42.764 2 -0.6361102526641019 0.19148737574088767 1.0 ['ENST00000303115.7_1_5:35877801-35877897:+|nuORF'] 41093 5771 HTRIPALSP True NCI_RA007_Epitope_Rep1 990.5610638751 990.55996993586 26.502 2 -0.6361987873450821 0.1915310662393827 1.0 ['ENST00000595465.6_1_19:15512376-15521402:-|nuORF', 'ENST00000397410.9_1_19:15514352-15521390:-|nuORF'] 113591 12032 TLVEWLQSQ True NCI_RA007_Epitope_Rep2 1102.56587447202 1102.56476993586 51.394 2 -0.6362659108401133 0.19158733121772137 1.0 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-5|PPFIBP1'] 118880 7659 VACRWVTPV True PC9_epitope_Rep1 1029.5429712828097 1029.5418699358602 34.283 2 -0.6362694594411121 0.19158733121772137 1.0 ['ENST00000558992.1_1_15:89179450-89180612:+|nuORF'] 129397 18326 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 77.292 2 -0.6363157363919202 0.19161248172230347 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 73418 19814 MTTRTYYTP True H1975_Epitope_Rep2 1132.5222954078802 1132.52065490379 82.195 3 -0.6363863249840521 0.19161248172230347 1.0 ['ENSG00000180155|ENST00000652477|LYNX1'] 13055 8337 DLPELSDSGD True NCI_RA007_Epitope_Rep5 1046.44039917538 1046.4393099358601 38.742 2 -0.6364441554594454 0.1916406116322118 1.0 ['ENSG00000185238|ENST00000331079|PRMT3'] 42312 19181 IDYAKRRLYWT True PC9_epitope_Rep3 1483.7935829910698 1483.79194490379 78.998 3 -0.6364999043377548 0.19166874066699852 1.0 ['ENSG00000070018|ENST00000261349|LRP6'] 131971 10526 VTSEEFDKF True H1975_Epitope_Rep3 1100.50260550912 1100.5015099358602 45.554 2 -0.6365979495970943 0.19170347788216263 1.0 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000577794.1_1_17:17750951-17752188:-|nuORF', 'ENST00000492723.1_1_22:35741624-35743199:+|nuORF', 'nc|ENSG00000175662|Q6ZVM7-4|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-3|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-5|TOM1L2', 'ENSG00000175662|ENST00000379504|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-2|TOM1L2'] 109124 7534 TALRDFKTTRR True H1975_Epitope_Rep1 1363.76843087239 1363.76677490379 33.974 3 -0.6366240080368741 0.19170347788216263 1.0 ['RUNDC3B|p.E323Nfs*3|1|0.08|ENSG00000105784|chr7:87777914-87777914|G/-|frameshift_variant', 'nc|ENSG00000105784|Q96NL0-2|RUNDC3B', 'nc|ENSG00000105784|Q96NL0-4|RUNDC3B', 'ENSG00000105784|ENST00000394654|RUNDC3B', 'nc|ENSG00000105784|Q96NL0|RUNDC3B'] 3290 19093 AGFEWNATYVL True PC9_epitope_Rep1 1269.60298825673 1269.60188993586 78.231 2 -0.6366544147742019 0.19170347788216263 1.0 ['nc|ENSG00000154025|A0PJK1-3|SLC5A10', 'nc|ENSG00000154025|A0PJK1-5|SLC5A10', 'nc|ENSG00000154025|A0PJK1-2|SLC5A10', 'ENSG00000154025|ENST00000395645|SLC5A10', 'nc|ENSG00000154025|A0PJK1-4|SLC5A10'] 82928 13925 PSDIDVPKP True H1975_Epitope_Rep2 966.5022115863 966.50110993586 58.71 2 -0.6366926646948122 0.19170347788216263 1.0 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 64414 12768 LPMSALVFFPP True H1975_Epitope_Rep1 1217.65185302545 1217.6507499358602 54.173 2 -0.6367700963222299 0.19174417519519707 1.0 ['ENST00000577684.1_1_17:18314705-18315443:+|nuORF'] 146 19950 AADGTIFLVP True PC9_epitope_Rep5 1002.5385970950199 1002.53750993586 81.79 2 -0.6367750186793223 0.19174417519519707 1.0 ['ENSG00000123405|ENST00000435572|NFE2'] 14216 8724 DSEVSEESPC True NCI_RA007_Epitope_Rep4 1080.3917347308 1080.3911749679298 40.348 1 -0.6368976805418782 0.19181895948363015 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 115375 3251 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 18.56 3 -0.6369607949842434 0.19185965130565968 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 54013 14174 KVGDFGLAA True PC9_epitope_Rep5 876.4705175351999 876.46942993586 59.53 2 -0.6369669291251745 0.19185965130565968 1.0 ['ENSG00000145632|ENST00000274289|PLK2', 'ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3'] 43055 9600 IEVEKERLL True PC9_epitope_Rep3 1127.65502382959 1127.6533649037901 41.878 3 -0.6371760098187694 0.1919499828921584 1.0 ['ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 16860 12862 EFFDELKQTK True NCI_RA007_Epitope_Rep2 1283.6397676882696 1283.6386699358602 54.649 2 -0.6372230195547176 0.19195956454121307 1.0 ['ENSG00000188981|ENST00000438480|MSANTD1'] 72648 8422 MLYDSWDQRRR True PC9_epitope_Rep1 1524.72558008424 1524.7239449037902 37.231 3 -0.6372771899845427 0.19195956454121307 1.0 ['ENSG00000184560|ENST00000333870|SPEM2'] 116633 6517 TVALRGAVTL True PC9_epitope_Rep6 999.60767971435 999.60658993586 33.74 2 -0.6373834735958313 0.19197213107105643 1.0 ['nc|ENSG00000163626|Q8N8Q8-2|COX18', 'nc|ENSG00000163626|Q8N8Q8-3|COX18', 'ENST00000421792.2_1_4:73934271-73935366:-|nuORF', 'nc|ENSG00000163626|Q8N8Q8-4|COX18', 'nc|ENSG00000163626|Q8N8Q8|COX18', 'ENSG00000163626|ENST00000507544|COX18'] 9152 17460 AVLDRNVAI True PC9_epitope_Rep1 969.5607295219299 969.55962993586 71.957 2 -0.6374369593520093 0.19198469721004013 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 66824 5851 LSMDSFYK True H1975_Epitope_Rep3 989.4528188657299 989.45172993586 27.519 2 -0.6374722737810571 0.19199726295818237 1.0 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000492660.1_1_20:62577468-62577618:-|nuORF', 'nc|ENSG00000198276|Q9NWZ5-2|UCKL1', 'nc|ENSG00000198276|Q9NWZ5-3|UCKL1'] 114734 15399 TQIPPLTA True PC9_epitope_Rep4 839.47526856247 839.47416993586 67.164 2 -0.6375090403254023 0.1920253794476238 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.G402Efs*4|1|0.39|ENSG00000106823|chr9:92510000-92510000|C/-|frameshift_variant'] 83589 8289 PVATVKYT True PC9_epitope_Rep6 877.4909186266099 877.48982993586 41.498 2 -0.6375719578957302 0.19209716045159084 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 94533 22827 RRRRVPGRE True PC9_epitope_Rep2 1180.7013543720798 1180.70024993586 93.294 2 -0.6375822211793837 0.19209716045159084 1.0 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 131976 13364 VTSEVQGLWRR True H1975_Epitope_Rep1 1329.71533267037 1329.7142299358602 56.514 2 -0.6375997601019725 0.19210972366927395 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'ENST00000485535.5_1_3:48445895-48454598:-|nuORF'] 60958 12393 LIDNYVRRWDW True NCI_RA007_Epitope_Rep2 1534.7680965192199 1534.76698993586 52.812 2 -0.6376492220414914 0.19211332431465847 1.0 ['HCAR2|p.M84I|1|0.28|ENSG00000182782|chr12:122703032-122703032|C/T|missense_variant'] 73615 18975 MWGWWRWWEHR True PC9_epitope_Rep3 1714.77280506018 1714.77115490379 78.21 3 -0.637652525581245 0.19211332431465847 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 142411 16282 YYEYNHDLF True PC9_epitope_Rep6 1262.5244035828598 1262.5233099358602 74.989 2 -0.637655689829729 0.19211332431465847 1.0 ['ENSG00000151748|ENST00000324679|SAV1'] 140444 24857 YRGRLLLSLE True NCI_RA007_Epitope_Rep1 1218.70845638478 1218.70734993586 102.89 2 -0.6376579450491364 0.19211332431465847 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 75699 13626 NLIPNGSSI True NCI_RA007_Epitope_Rep4 913.48689587533 913.48578993586 59.633 2 -0.6376923640943315 0.1921258863042667 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 9182 14650 AVLQQHHVKL True PC9_epitope_Rep4 1171.68257599011 1171.68094490379 64.284 3 -0.637844736658571 0.19225985011039587 1.0 ['ENSG00000186648|ENST00000342740|CARMIL3'] 91106 1867 RFRFRGRPY True NCI_RA007_Epitope_Rep2 1253.6893927060498 1253.6877449037902 10.172 3 -0.6378508956079434 0.19225985011039587 1.0 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENST00000549407.1_1_12:72054197-72057036:-|nuORF'] 126880 14455 VLQLGNIVFK True H1975_Epitope_Rep3 1129.68593003505 1129.68482993586 60.959 2 -0.6378892659204778 0.19227599931590977 1.0 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 123569 14969 VGPRRKLNEI True NCI_RA007_Epitope_Rep5 1180.70403971068 1180.70294993586 64.244 2 -0.6379190263407618 0.19227599931590977 1.0 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 60102 12842 LGLTDHAEL True PC9_epitope_Rep2 967.49746055903 967.49636993586 54.698 2 -0.6379200236174243 0.19227599931590977 1.0 ['OR5J2|p.C97Sfs*21|1|0.27|ENSG00000174957|chr11:56176907-56176907|G/-|frameshift_variant', 'OR5J2|p.A25Sfs*97|1|0.25|ENSG00000174957|chr11:56176685-56176686|-/A|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 80902 17298 PHWWRTYREYF True PC9_epitope_Rep1 1639.76843087239 1639.76677490379 71.353 3 -0.6379221249956403 0.19227599931590977 1.0 ['ENSG00000204316|ENST00000309352|MRPL38', 'ENST00000410030.1_1_17:73900359-73901082:-|nuORF', 'ENST00000464758.1_1_17:73900462-73900977:-|nuORF', 'ENST00000493383.5_1_17:73897833-73900929:-|nuORF', 'ENST00000477736.5_1_17:73897061-73900795:-|nuORF', 'ENST00000493104.5_1_17:73897660-73900929:-|nuORF'] 125159 21301 VIGVFILER True PC9_epitope_Rep2 1044.6331661861998 1044.63206993586 87.398 2 -0.6379273742927185 0.19227599931590977 1.0 ['ZNF841|p.R582Nfs*116|1|1.0|ENSG00000197608|chr19:52065789-52065789|C/-|frameshift_variant'] 107866 15382 SVVKDSLL True PC9_epitope_Rep3 859.5014833103099 859.50038993586 64.323 2 -0.6379328227154382 0.19228855721393034 1.0 ['ENST00000478840.1_1_X:118972286-118974571:-|nuORF'] 4273 8010 AIFTKTFQ True NCI_RA007_Epitope_Rep5 954.51746772762 954.51636993586 37.503 2 -0.6379403265962375 0.19231666174344306 1.0 ['ENSG00000138039|ENST00000294954|LHCGR', 'nc|ENSG00000138039|P22888-2|LHCGR'] 23095 9522 EVIPYPSTLR True H1975_Epitope_Rep1 1173.63937376545 1173.63826993586 41.549 2 -0.6380632070711576 0.19232921861882404 1.0 ['ENST00000468499.5_1_7:99687333-99688626:+|nuORF'] 78013 12043 NVQFQTQSL True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 51.183 2 -0.6380871198317355 0.19234177510377315 1.0 ['nc|ENSG00000175471|Q6DN14-4|MCTP1', 'nc|ENSG00000175471|Q6DN14-2|MCTP1', 'ENSG00000175471|ENST00000515393|MCTP1'] 64615 7108 LPSTELGSK True NCI_RA007_Epitope_Rep2 930.5022115863 930.50110993586 32.268 2 -0.6381027675511671 0.19235134084726 1.0 ['ENST00000491100.5_1_3:50296445-50296607:+|nuORF'] 124794 2725 VHEVVEKQ True H1975_Epitope_Rep2 966.5134449763398 966.51234993586 14.567 2 -0.6381136931147133 0.19235134084726 1.0 ['ENST00000342315.8_1_12:113424985-113425036:+|nuORF'] 38976 22240 HHKITKLVL True NCI_RA007_Epitope_Rep5 1087.68659874139 1087.6855099358602 92.693 2 -0.6381694354251756 0.1923949880297236 1.0 ['ENST00000380483.7_1_X:15262630-15266835:-|nuORF', 'ENST00000473862.5_1_X:15262630-15288056:-|nuORF', 'ENSG00000102048|ENST00000380488|ASB9'] 75302 15773 NILDIVRPP True PC9_epitope_Rep2 1035.6076797143498 1035.60658993586 65.935 2 -0.6382082477664998 0.19239856987408674 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 10224 25465 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 105.51 1 -0.6382217866363847 0.19239856987408674 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 55962 21090 LARRWARRP True PC9_epitope_Rep3 1180.7053771233598 1180.70428993586 86.406 2 -0.63824868866311 0.19239856987408674 1.0 ['ENST00000518192.5_1_8:29953188-29953320:+|nuORF'] 141310 6123 YTDSLFYMDHK True H1975_Epitope_Rep2 1418.6176523447 1418.6165499358601 28.532 2 -0.6382501994442843 0.19239856987408674 1.0 ['ENSG00000254685|ENST00000370898|FPGT', 'nc|ENSG00000254685|O14772|FPGT'] 112990 16827 TLLSVKLQV True PC9_epitope_Rep1 999.6328318330299 999.63172993586 69.549 2 -0.6383006912359679 0.19240813281104271 1.0 ['ENST00000548159.5_2_12:70637993-70671955:+|nuORF'] 43603 14764 IGTTHPSIV True PC9_epitope_Rep4 923.50763131991 923.50652993586 64.723 2 -0.6383191747001867 0.19240813281104271 1.0 ['nc|ENSG00000198520|Q6PIY5-2|ARMH1', 'ENST00000357508.5_1_1:45155363-45190065:+|nuORF', 'ENSG00000198520|ENST00000535358|ARMH1'] 57171 11478 LDTYNCDLHF True NCI_RA007_Epitope_Rep4 1239.52302368387 1239.52192993586 51.083 2 -0.6383494224503831 0.19242068611754465 1.0 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'HNRNPU|p.K682Nfs*11|1|0.03|ENSG00000153187|chr1:244856025-244856026|-/A|frameshift_variant'] 81098 23570 PIVLVSLIL True PC9_epitope_Rep2 965.65250464845 965.65140993586 96.137 2 -0.638384347230216 0.1924487829141667 1.0 ['ENST00000532483.5_1_14:73572990-73578268:+|nuORF'] 96672 23407 SAKKKMKSKKK True NCI_RA007_Epitope_Rep4 1290.8169612879399 1290.81586993586 101.6 2 -0.6384287610668018 0.1924523609686344 1.0 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 10231 25571 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 106.41 1 -0.638438269914759 0.1924523609686344 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 15318 7537 EAFRQKAEL True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 35.677 2 -0.6384444478583837 0.1924523609686344 1.0 ['ENSG00000139437|ENST00000405876|TCHP'] 128992 8790 VQLEEEIE True PC9_epitope_Rep3 987.4760564081098 987.47494993586 38.762 2 -0.6384796897157202 0.1924523609686344 1.0 ['ENSG00000270765|ENST00000604641|GAS2L2', 'nc|ENSG00000270765|Q8NHY3-2|GAS2L2', 'GAS2L2|p.G649Vfs*61|1|0.33|ENSG00000270765|chr17:35745551-35745551|C/-|frameshift_variant'] 42578 18752 IEFRPLSL True PC9_epitope_Rep3 973.5596668927699 973.55856993586 77.351 2 -0.6384939848243771 0.19246192104445134 1.0 ['ENST00000361368.6_1_7:98625224-98626022:-|nuORF'] 107040 21731 SVFSGFLLFPD True NCI_RA007_Epitope_Rep4 1227.6175756917098 1227.61646993586 94.216 2 -0.6384991959733366 0.19246192104445134 1.0 ['ENSG00000159189|ENST00000374640|C1QC'] 131621 10568 VTLRRHNNEP True H1975_Epitope_Rep2 1234.65306676698 1234.65196993586 45.671 2 -0.6385335281571093 0.1924870224736564 1.0 ['CDH8|p.K648N|1|0.1|ENSG00000150394|chr16:61654064-61654064|T/G|missense_variant'] 10632 6101 CPEEALAR True H1975_Epitope_Rep3 887.4171020633498 887.41600993586 28.479 2 -0.6385407423002791 0.1924870224736564 1.0 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-3|ILDR1', 'ENST00000460554.1_1_3:121712781-121740924:-|nuORF', 'nc|ENSG00000145103|Q86SU0-4|ILDR1'] 52648 21265 KLRSATASRRG True PC9_epitope_Rep6 1201.7003513125699 1201.69924993586 94.649 2 -0.6386411047353294 0.19256173942775437 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 137295 6345 YDATYHKA True NCI_RA007_Epitope_Rep1 967.4399456829101 967.43884993586 28.706 2 -0.6386746885322996 0.19257129536094492 1.0 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6'] 20466 8214 EPILNYLHR True PC9_epitope_Rep2 1153.62439240765 1153.6227449037901 36.952 3 -0.6387061444593607 0.19257129536094492 1.0 ['ENST00000526766.1_1_11:112051504-112052349:+|nuORF'] 127882 12089 VPGHHVTP True NCI_RA007_Epitope_Rep1 842.43988611326 842.43878993586 51.011 2 -0.6387856822619411 0.19264001989183813 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 123202 20509 VGLEASLLV True PC9_epitope_Rep4 899.53278343859 899.53168993586 87.037 2 -0.6387934210004951 0.19264001989183813 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 20731 7743 EQERRQEEQER True NCI_RA007_Epitope_Rep1 1515.7025957101898 1515.70148993586 34.113 2 -0.6388007022903456 0.19264001989183813 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENST00000515341.6_1_15:85055093-85055729:-|nuORF', 'ENSG00000197978|ENST00000618348|GOLGA6L9', 'nc|ENSG00000197978|A6NEM1-2|GOLGA6L9', 'ENSG00000278662|ENST00000610657|GOLGA6L10'] 44890 8977 INLKEKKY True NCI_RA007_Epitope_Rep2 1034.6124307416198 1034.61132993586 39.534 2 -0.6388323167498992 0.1926465789187425 1.0 ['ENSG00000151576|ENST00000281273|QTRT2', 'nc|ENSG00000151576|Q9H974-4|QTRT2', 'ENST00000495782.1_1_3:113801459-113804748:+|nuORF', 'ENST00000483272.1_1_3:113798714-113804748:+|nuORF', 'nc|ENSG00000151576|Q9H974-2|QTRT2', 'nc|ENSG00000151576|Q9H974-3|QTRT2'] 33551 13146 GLELERSELFK True H1975_Epitope_Rep1 1319.7085159544297 1319.7074099358601 55.659 2 -0.6388399475917618 0.1926465789187425 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 139200 18421 YLETTVYAL True PC9_epitope_Rep2 1071.54882742555 1071.5477299358602 76.186 2 -0.6388500764434123 0.1926465789187425 1.0 ['ENST00000462315.5_1_3:122278498-122282968:-|nuORF'] 83421 17188 PTLSRKDHFP True PC9_epitope_Rep1 1196.63020606408 1196.62910993586 70.934 2 -0.6390545766404256 0.1926501437339756 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 39474 9535 HLDFFPNGGK True H1975_Epitope_Rep1 1130.55089311422 1130.5497899358602 41.599 2 -0.6390569500960958 0.1926501437339756 1.0 ['nc|ENSG00000266200|P54317|PNLIPRP2'] 34240 12232 GNPYEERKRQE True H1975_Epitope_Rep1 1404.6745900571998 1404.67348993586 52.072 2 -0.639091977144133 0.1926501437339756 1.0 ['GCSAML|p.D25Y|1|0.25|ENSG00000169224|chr1:247556450-247556450|G/T|missense_variant'] 39683 10116 HLRSRQLLYDE True NCI_RA007_Epitope_Rep2 1428.74736107464 1428.74626993586 43.936 2 -0.6391002413062458 0.1926501437339756 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF', 'ENSG00000165923|ENST00000525123|AGBL2'] 66838 17403 LSMPFVISV True PC9_epitope_Rep2 991.54123994731 991.54014993586 72.2 2 -0.639106332261066 0.19265969513805803 1.0 ['ENST00000527401.5_1_11:45950959-45951256:-|nuORF'] 105192 10501 SRGGGGGG True NCI_RA007_Epitope_Rep4 603.27248643499 603.2719349679301 47.241 1 -0.6391418615046525 0.19265969513805803 1.0 ['CON__Q6IFZ6', 'ENST00000258111.4_1_12:70760395-70760632:+|nuORF', 'CON__REFSEQ:XP_932229', 'ENSG00000188573|ENST00000338333|FBLL1', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'MCU|p.R94Lfs*2|1|0.33|ENSG00000156026|chr10:72859236-72859237|-/T|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 18039 21868 EIERSPLLEW True H1975_Epitope_Rep3 1270.6557521055797 1270.65464993586 91.424 2 -0.6391845775144757 0.1926722396594052 1.0 ['ENSG00000138658|ENST00000505019|ZGRF1', 'nc|ENSG00000138658|Q86YA3-2|ZGRF1', 'nc|ENSG00000138658|Q86YA3-7|ZGRF1'] 112308 13463 TKVLHGLL True PC9_epitope_Rep6 879.5541875895099 879.55308993586 63.477 2 -0.6392464342731109 0.19271642533093034 1.0 ['nc|ENSG00000008283|P49447-2|CYB561', 'ENST00000577368.5_1_17:61512979-61514908:-|nuORF', 'ENSG00000008283|ENST00000360793|CYB561'] 70815 9306 LYAVVWPDR True NCI_RA007_Epitope_Rep4 1117.5920296502097 1117.59092993586 42.651 2 -0.6392600706635628 0.19271642533093034 1.0 ['ENST00000464917.5_1_1:12676606-12676750:-|nuORF'] 108820 13218 SYVKDLVVQR True PC9_epitope_Rep6 1205.6768219033297 1205.6751749037899 62.494 3 -0.6393075468452332 0.19271642533093034 1.0 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 128648 13988 VPVGIVAV True H1975_Epitope_Rep2 752.4796256669199 752.47907496793 58.954 1 -0.6393256503698937 0.19271642533093034 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 44092 9564 IINETVPN True PC9_epitope_Rep5 898.47599683846 898.47544496793 41.746 1 -0.6393840552106119 0.19271642533093034 1.0 ['nc|ENSG00000237702|A0A576|TRBV3-1'] 10235 25927 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 107.97 1 -0.6393978006062869 0.19271642533093034 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 33548 7580 GLEKELQEVRR True H1975_Epitope_Rep1 1355.7521121019097 1355.75047490379 34.149 3 -0.6394239408202078 0.19274450400062146 1.0 ['ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0'] 117587 17910 TVSRRRIC True PC9_epitope_Rep2 989.55526730201 989.55416993586 74.196 2 -0.6394935808856206 0.19275704564521642 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant'] 129399 22119 VRELRGLG True PC9_epitope_Rep4 898.5348491272598 898.53374993586 93.297 2 -0.6395099909753976 0.1927851228113785 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 52776 10576 KNKIWVNEFRY True H1975_Epitope_Rep2 1495.7935829910698 1495.79194490379 45.703 3 -0.6395609146617868 0.19279167313966133 1.0 ['ENSG00000165029|ENST00000374736|ABCA1'] 127863 12436 VPFTVTLISF True PC9_epitope_Rep5 1122.63249747986 1122.6308549037901 52.836 3 -0.6395669252018817 0.19279167313966133 1.0 ['nc|ENSG00000255374|P59539|TAS2R45'] 17573 11563 EHHKETEYK True NCI_RA007_Epitope_Rep2 1199.55710069347 1199.5560099358602 49.566 2 -0.6395981185120746 0.19279167313966133 1.0 ['nc|ENSG00000145730|P19021-4|PAM', 'nc|ENSG00000145730|P19021-3|PAM', 'ENST00000505372.1_1_5:102295723-102310166:+|nuORF', 'nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM'] 73086 12393 MREREREQRWR True H1975_Epitope_Rep3 1630.8222744337397 1630.82116993586 52.858 2 -0.639637712068522 0.19280421307731743 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 119131 6939 VAIDFSKG True NCI_RA007_Epitope_Rep3 835.44396843419 835.44286993586 34.401 2 -0.6396638821720723 0.19281076210892598 1.0 ['ENST00000590008.5_1_19:38161161-38167293:-|nuORF'] 131893 6558 VTRLEQSL True NCI_RA007_Epitope_Rep5 944.5290950404799 944.52798993586 31.887 2 -0.6396745150735057 0.19281076210892598 1.0 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB', 'ENST00000571632.5_1_17:7838298-7849136:+|nuORF'] 10225 26002 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 107.93 1 -0.6397102893758063 0.19281076210892598 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 137120 9562 YASQPANL True PC9_epitope_Rep1 862.4184819623399 862.41738993586 41.638 2 -0.639750966054761 0.19285436893203883 1.0 ['ENSG00000112078|ENST00000373731|KCTD20', 'KCTD20|p.F68Y|1|0.06|ENSG00000112078|chr6:36474831-36474831|T/A|missense_variant', 'KCTD20|p.D58A|1|0.19|ENSG00000112078|chr6:36474801-36474801|A/C|missense_variant'] 7595 17363 ASFLKPPEP True PC9_epitope_Rep3 984.5280324113199 984.52692993586 71.958 2 -0.6398074526394356 0.19286690692183422 1.0 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|113|2|anti-sense'] 63043 6689 LLQCPWRAP True NCI_RA007_Epitope_Rep1 1082.56952038382 1082.5684299358602 30.029 2 -0.6398793934527535 0.19289198173289013 1.0 ['ITPA|p.C76Sfs*33|1|0.11|ENSG00000125877|chr20:3214020-3214021|-/AGCCACTTCCTGGTTCATAGACACTGTCTTT|frameshift_variant'] 116719 16462 TVDGRTILV True PC9_epitope_Rep1 972.5603951687599 972.55928993586 68.146 2 -0.6398874920907324 0.19289198173289013 1.0 ['ENST00000464678.5_1_22:51208306-51220722:-|nuORF', 'nc|ENSG00000144134|Q9UNT1|RABL2B', 'ENSG00000079974|ENST00000691320|RABL2B', 'nc|ENSG00000144134|Q9UNT1-3|RABL2B'] 24787 18269 FATEFTKVF True PC9_epitope_Rep4 1088.55424715916 1088.5531499358601 78.343 2 -0.6399112846698578 0.1929170549860205 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 129398 22018 VRELRGLG True PC9_epitope_Rep4 898.5348491272598 898.53374993586 92.914 2 -0.6399406286118144 0.1929170549860205 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 136194 5854 WRRWCWRWPWR True NCI_RA007_Epitope_Rep1 1772.8735221609597 1772.87188490379 26.823 3 -0.6399644238923686 0.19294512356129914 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 64100 11397 LPDLGPIG True NCI_RA007_Epitope_Rep4 780.43815477776 780.43760496793 50.755 1 -0.6400300886786904 0.19302632600761047 1.0 ['ENSG00000113924|ENST00000283871|HGD', 'HGD|p.V324Gfs*3|1|0.14|ENSG00000113924|chr3:120638490-120638491|-/C|frameshift_variant'] 18174 14296 EIKWRISNAK True H1975_Epitope_Rep1 1243.7037053575098 1243.7026099358602 60.176 2 -0.6400364108564222 0.19302632600761047 1.0 ['ENST00000361804.4_1_10:112342380-112343169:+|nuORF'] 114818 10306 TQLLSRKE True PC9_epitope_Rep2 973.5556441414899 973.55454993586 44.97 2 -0.6400389353763879 0.19302632600761047 1.0 ['ENST00000316418.9_1_5:424040-432966:+|nuORF', 'ENST00000505113.5_1_5:424040-432966:+|nuORF'] 36779 7129 GVKVRYLEEER True PC9_epitope_Rep1 1376.7412130650398 1376.7401099358601 32.231 2 -0.6400419467002508 0.19302632600761047 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L', 'HSPA4L|p.K523Qfs*3|1|0.25|ENSG00000164070|chr4:127811623-127811624|-/T|frameshift_variant', 'HSPA4L|p.N522Lfs*5|1|0.25|ENSG00000164070|chr4:127811621-127811622|-/CTCC|frameshift_variant'] 111310 8030 THMTAIVGM-[Oxidation] True PC9_epitope_Rep4 975.4517737003499 975.45066993586 38.338 2 -0.6400685266723546 0.19303586127634462 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 129982 23979 VRVSSIGV True NCI_RA007_Epitope_Rep1 815.4865019525099 815.4859549679301 99.244 1 -0.6400908420348882 0.19303586127634462 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant'] 70651 25959 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 105.67 3 -0.6401155266786455 0.19304839411070385 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 10230 26638 CCCCCGGG True H1975_Epitope_Rep2 704.1208797689599 704.1203249679301 109.74 1 -0.6402008615362429 0.19306092655577817 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 40050 10237 HPTENLIASA True PC9_epitope_Rep1 1051.52982331647 1051.5287299358602 44.258 2 -0.6402462368816453 0.1930889889734431 1.0 ['ENSG00000196981|ENST00000330689|WDR5B'] 10281 9049 CCGTCSAR True PC9_epitope_Rep1 799.27751443939 799.27640993586 39.658 2 -0.6402757404815324 0.19311405143496085 1.0 ['NAT16|p.S311Afs*46|1|0.08|ENSG00000167011|chr7:101172258-101172258|T/-|frameshift_variant'] 124750 7466 VHARTPHAE True H1975_Epitope_Rep2 1016.5151763118399 1016.51406993586 33.665 2 -0.640310595081936 0.19311405143496085 1.0 ['nc|ENSG00000140945|P55290-5|CDH13', 'ENSG00000140945|ENST00000567109|CDH13', 'nc|ENSG00000140945|P55290-4|CDH13', 'ENST00000566333.1_1_16:82660697-83065865:+|nuORF', 'nc|ENSG00000140945|P55290-3|CDH13', 'nc|ENSG00000140945|P55290-2|CDH13'] 87613 13407 QQPRTPILL True PC9_epitope_Rep2 1064.6342288153598 1064.63312993586 56.85 2 -0.6404007214713484 0.1931265820819033 1.0 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 62354 16086 LLGLKKLSFYY True NCI_RA007_Epitope_Rep4 1343.78530972315 1343.7842099358602 69.766 2 -0.6404219145664122 0.1931331138580036 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 31691 16941 GEFVDLYVP True NCI_RA007_Epitope_Rep4 1037.5069626135696 1037.50637496793 73.415 1 -0.6404554854274618 0.1931331138580036 1.0 ['ENSG00000171858|ENST00000343986|RPS21'] 57414 16566 LEASDPNAYEL True H1975_Epitope_Rep2 1220.55609763396 1220.5550099358602 68.947 2 -0.6405042650405973 0.1931331138580036 1.0 ['ENSG00000120051|ENST00000369704|CFAP58'] 41171 14963 HVGLTDDPEL True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 62.557 2 -0.64053566251947 0.19313964502554387 1.0 ['OR5B12|p.L12H|1|0.08|ENSG00000172362|chr11:58440117-58440117|A/T|missense_variant'] 100235 8283 SIWIFYRKLFF True NCI_RA007_Epitope_Rep1 1518.8387422783396 1518.83710490379 36.218 3 -0.6405507194967516 0.19313964502554387 1.0 ['ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 92008 18089 RKRLHFKLCKK True NCI_RA007_Epitope_Rep5 1455.8972772973095 1455.89563490379 76.378 3 -0.6405578468134235 0.19313964502554387 1.0 ['LNX2|p.V186Qfs*8|1|0.42|ENSG00000139517|chr13:27569129-27569130|-/GC|frameshift_variant', 'ENSG00000139517|ENST00000316334|LNX2'] 89371 16111 QWTSRKRK True NCI_RA007_Epitope_Rep4 1088.6203100867199 1088.61920993586 69.87 2 -0.6406150101628901 0.19315217391304348 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 115687 17411 TSAESFVNV True PC9_epitope_Rep5 952.45017601344 952.44906993586 71.972 2 -0.6406309410085512 0.19316170305270022 1.0 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 52928 12884 KPGKPRKRKKR True NCI_RA007_Epitope_Rep4 1377.9157042427698 1377.91405490379 56.646 3 -0.6406413955289864 0.19316170305270022 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 10234 26378 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 110.04 1 -0.6406710240238913 0.1932022855723247 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 83651 5196 PVEAPVYSPLF True NCI_RA007_Epitope_Rep1 1217.63322575585 1217.63158490379 24.294 3 -0.6407010937676751 0.1932022855723247 1.0 ['ENST00000553530.5_1_14:73029293-73029455:+|nuORF'] 65492 27121 LRLLRLKLK True NCI_RA007_Epitope_Rep3 1151.8230326445498 1151.82139490379 119.08 3 -0.6407581287363172 0.19326139274901016 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 60053 21060 LGLDRKMVT True PC9_epitope_Rep5 1031.57975071435 1031.57864993586 86.067 2 -0.6407782788589679 0.19327391857901438 1.0 ['ENSG00000120256|ENST00000239367|LRP11'] 48773 14630 KDLEIEQWHKK True H1975_Epitope_Rep1 1452.77251319332 1452.7714099358602 61.484 2 -0.6407965587332473 0.19328396441712076 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 15486 17233 EALRYYRRKV True NCI_RA007_Epitope_Rep3 1352.7677025963999 1352.76660993586 75.68 2 -0.6408193953300347 0.19328396441712076 1.0 ['ENSG00000108950|ENST00000592554|FAM20A'] 141087 8208 YSPWQYFAHSK True H1975_Epitope_Rep3 1412.65133543148 1412.6502299358601 36.554 2 -0.6408296858683538 0.19328396441712076 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 60538 11799 LHDLEWLK True NCI_RA007_Epitope_Rep4 1052.5654805492002 1052.5643899358602 52.361 2 -0.640849017759261 0.19328396441712076 1.0 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant', 'MACC1|p.D299Ifs*7|1|0.2|ENSG00000183742|chr7:20159466-20159466|C/-|frameshift_variant'] 7938 9406 ATAQPPAPL True PC9_epitope_Rep4 864.4705175351999 864.46942993586 43.789 2 -0.6408499196823588 0.19328396441712076 1.0 ['ENSG00000221926|ENST00000649191|TRIM16'] 20712 6906 EQELFEPNQ True H1975_Epitope_Rep3 1132.5036681382799 1132.50256993586 31.524 2 -0.6408723015711328 0.19328396441712076 1.0 ['nc|ENSG00000168781|Q6PFW1-7|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-4|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-3|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-2|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1|PPIP5K1', 'ENSG00000168781|ENST00000420765|PPIP5K1'] 70916 19040 LYFFSSFLQN True PC9_epitope_Rep6 1264.6128246644398 1264.61172993586 85.882 2 -0.6408810183010777 0.19328396441712076 1.0 ['ENST00000560014.5_1_15:60678230-60678305:-|nuORF'] 87614 14290 QQPRTPILL True PC9_epitope_Rep3 1064.6342288153598 1064.63312993586 60.054 2 -0.6409250580160541 0.19332453621050996 1.0 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 142707 7476 YYQDTPKQI True PC9_epitope_Rep6 1154.5607890915799 1154.5596899358602 38.002 2 -0.6409436529717311 0.19332453621050996 1.0 ['ENSG00000048162|ENST00000614830|NOP16'] 67751 11023 LSYIYNTVQ True NCI_RA007_Epitope_Rep1 1099.55497543515 1099.5538699358601 46.873 2 -0.6409549362327512 0.19333705911574764 1.0 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 129400 23562 VRELRGLG True PC9_epitope_Rep4 898.5348491272598 898.53374993586 98.938 2 -0.6409641628795363 0.19334658014840572 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 67700 12401 LSWLYGNAP True PC9_epitope_Rep2 1019.5076313199099 1019.50652993586 53.009 2 -0.6409874520552953 0.19334658014840572 1.0 ['ENST00000355803.8_1_16:1375125-1375221:+|nuORF'] 130872 13406 VTDAERSIV True PC9_epitope_Rep3 988.5189242795999 988.51782993586 56.598 2 -0.6409986697555444 0.19335910212825408 1.0 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENST00000484624.1_7:74233985-74234647:-|nuORF'] 74387 17061 NESAVIVAP True PC9_epitope_Rep3 898.4759968384599 898.47544496793 70.777 1 -0.6410203961766585 0.19336261894044052 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 103597 7738 SPSSTTLTSA True PC9_epitope_Rep3 950.4556553167 950.45454993586 34.757 2 -0.6410225486108314 0.19336261894044052 1.0 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 45911 11167 ISEAWIKAI True PC9_epitope_Rep6 1029.5858816406098 1029.58478993586 53.905 2 -0.641033140726634 0.19336261894044052 1.0 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'ENST00000438698.1_1_3:10029596-10035934:+|nuORF'] 20249 6876 ENLVKNLNSEN True PC9_epitope_Rep3 1272.6309939097198 1272.62988993586 31.464 2 -0.6410568067021613 0.19336261894044052 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 18084 11548 EIHLQVKYA True H1975_Epitope_Rep1 1099.60259433391 1099.6014899358602 49.405 2 -0.6411363163892065 0.19343422584400466 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 123039 15878 VGITSGFWIW True PC9_epitope_Rep3 1164.59678067748 1164.59512490379 66.223 3 -0.6411757325750297 0.19343422584400466 1.0 ['ENSG00000157240|ENST00000287934|FZD1', 'ENSG00000180340|ENST00000315323|FZD2'] 73614 18891 MWGWWRWWEHR True PC9_epitope_Rep1 1714.77280506018 1714.77115490379 77.449 3 -0.641216315387365 0.19344674510290877 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 56603 7775 LDHQIPLDP True NCI_RA007_Epitope_Rep2 1046.53965972418 1046.53856993586 34.872 2 -0.6412915281368744 0.19345325862577412 1.0 ['ENSG00000102870|ENST00000262525|ZNF629'] 142194 20137 YVVIPPMLNP True PC9_epitope_Rep3 1141.6205528971698 1141.61944993586 82.711 2 -0.6413008138614595 0.19345325862577412 1.0 ['ENSG00000187747|ENST00000345043|OR52B6'] 132426 24975 VVARTLGG True PC9_epitope_Rep3 771.4602872046698 771.4597349679301 101.41 1 -0.6413055119107534 0.19345325862577412 1.0 ['IRS4|p.G575Dfs*36|1|0.72|ENSG00000133124|chrX:108734621-108734621|C/-|frameshift_variant'] 17132 14018 EGNSFGFV True NCI_RA007_Epitope_Rep1 855.3762827971899 855.37518993586 58.553 2 -0.6414501475116864 0.19346577681204408 1.0 ['nc|ENSG00000144596|Q9C0E4-2|GRIP2', 'ENSG00000144596|ENST00000621039|GRIP2', 'ENST00000422481.5_1_3:14565113-14565278:-|nuORF', 'ENST00000413414.1_1_3:14565113-14581815:-|nuORF'] 137105 13722 YAQYGEDDEE True PC9_epitope_Rep1 1217.4360420709297 1217.43494993586 57.63 2 -0.6415944599290776 0.19354037652682715 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 57852 14064 LEEYFKYDP True PC9_epitope_Rep1 1202.54955570154 1202.5484499358602 58.936 2 -0.6416756197072403 0.19358092902705135 1.0 ['nc|ENSG00000290445|Q5T2Q4|CCNYL2'] 76153 12952 NMYGKVVTV True PC9_epitope_Rep3 1009.52665251233 1009.52554993586 54.843 2 -0.6416848342520256 0.19358092902705135 1.0 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF', 'SUPT5H|p.G719Afs*6|1|0.47|ENSG00000196235|chr19:39472926-39472926|A/-|frameshift_variant'] 33835 11306 GLNPISTV True PC9_epitope_Rep3 799.4439684341901 799.44286993586 48.494 2 -0.6417374837626962 0.19362448396809137 1.0 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 57247 10222 LDWRRRKP True PC9_epitope_Rep2 1125.65194456817 1125.6508499358602 44.655 2 -0.6417675730088804 0.19362798348800397 1.0 ['ENST00000545932.5_1_12:108956369-108956426:+|nuORF'] 86990 10831 QLYWYYLEQFQ True PC9_epitope_Rep3 1579.7347307022699 1579.7330849037899 46.634 3 -0.6418152683286698 0.19362798348800397 1.0 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 116027 9923 TSLSSAGGSSP True PC9_epitope_Rep1 949.43525422529 949.43414993586 43.028 2 -0.641822096453955 0.19362798348800397 1.0 ['ENST00000288943.4_1_2:96809359-96809716:-|nuORF'] 61204 18427 LILKPVTSP True PC9_epitope_Rep2 966.61136811246 966.61026993586 76.211 2 -0.6418363705762288 0.19362798348800397 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 32890 15603 GHSLTQFV True PC9_epitope_Rep5 887.45011644379 887.44900993586 65.028 2 -0.6418941045133407 0.1936374922408442 1.0 ['ENSG00000198793|ENST00000361445|MTOR'] 116632 7015 TVALRGAVTL True PC9_epitope_Rep4 999.60767971435 999.60658993586 34.23 2 -0.6419076833993252 0.1936374922408442 1.0 ['nc|ENSG00000163626|Q8N8Q8-2|COX18', 'nc|ENSG00000163626|Q8N8Q8-3|COX18', 'ENST00000421792.2_1_4:73934271-73935366:-|nuORF', 'nc|ENSG00000163626|Q8N8Q8-4|COX18', 'nc|ENSG00000163626|Q8N8Q8|COX18', 'ENSG00000163626|ENST00000507544|COX18'] 117412 12582 TVPRRWFCP True H1975_Epitope_Rep1 1160.59131845756 1160.5902299358602 53.445 2 -0.6419356743278842 0.19366552350211821 1.0 ['ENST00000455810.5_1_10:6624113-6625881:+|nuORF'] 116683 14439 TVCQFITATEM True PC9_epitope_Rep3 1242.5624459677 1242.56080490379 60.646 3 -0.6419398853308406 0.19367202532431257 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 81281 22712 PKYCLTPEYP True PC9_epitope_Rep3 1209.5739966275698 1209.57288993586 92.63 2 -0.6419481466924394 0.19367202532431257 1.0 ['ENSG00000130176|ENST00000252456|CNN1', 'nc|ENSG00000130176|P51911-2|CNN1'] 30945 17104 GARLQELTLA True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 71.039 2 -0.6419797819820199 0.19367202532431257 1.0 ['ENST00000548477.5_1_12:113758555-113770610:-|nuORF'] 89260 8278 QVVILDEAH True NCI_RA007_Epitope_Rep3 1022.53965972418 1022.53856993586 39.687 2 -0.641997226350897 0.19369103773584906 1.0 ['BRIP1|p.V457Cfs*6|1|0.28|ENSG00000136492|chr17:61793701-61793702|-/A|frameshift_variant', 'nc|ENSG00000136492|Q9BX63-2|BRIP1', 'ENSG00000136492|ENST00000259008|BRIP1'] 65637 7960 LSAGLQLR True PC9_epitope_Rep6 856.51305105352 856.51194993586 40.072 2 -0.6420002741591883 0.19369103773584906 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 85521 15987 QGAGSVLF True PC9_epitope_Rep2 777.40210362221 777.40100993586 66.748 2 -0.6420234830939147 0.19369103773584906 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 123799 13678 VGRLKHERV True NCI_RA007_Epitope_Rep4 1092.651610215 1092.65050993586 59.835 2 -0.642046402565427 0.19369103773584906 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 121919 10811 VFRVRASL True PC9_epitope_Rep3 946.5712346359799 946.57012993586 46.553 2 -0.6420552109988479 0.19371305332733393 1.0 ['nc|ENSG00000167554|Q8N9Z0-2|ZNF610', 'ENSG00000167554|ENST00000403906|ZNF610'] 75676 5764 NLHEKRHR True PC9_epitope_Rep2 1088.59515796804 1088.59406993586 27.564 2 -0.6420624612097657 0.19371305332733393 1.0 ['ENSG00000151320|ENST00000280979|AKAP6'] 100060 16441 SIRPSWSSSTL True PC9_epitope_Rep2 1219.61970095003 1219.6186099358601 68.482 2 -0.6420766975802843 0.19371305332733393 1.0 ['ENST00000575712.5_1_17:79009028-79031686:+|nuORF'] 94633 23396 RRVRMVVLA True PC9_epitope_Rep1 1098.6808021682998 1098.67970993586 94.776 2 -0.6420923466455891 0.19372556320983056 1.0 ['ENST00000525154.1_1_11:9779436-9779646:-|nuORF'] 5576 7078 ANEMFRIFS True PC9_epitope_Rep6 1113.5277151414898 1113.52660993586 36.259 2 -0.6421267647857318 0.19376309052827553 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 123800 13988 VGRLKHERV True NCI_RA007_Epitope_Rep5 1092.651610215 1092.65050993586 60.489 2 -0.642147180160406 0.19376309052827553 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 45004 8680 IPDHYFKG True H1975_Epitope_Rep1 975.48141657207 975.48030993586 38.318 2 -0.6421637063686362 0.19376309052827553 1.0 ['IL7R|p.W217C|1|0.17|ENSG00000168685|chr5:35873593-35873593|G/T|missense_variant', 'nc|ENSG00000168685|P16871-4|IL7R', 'nc|ENSG00000168685|P16871-3|IL7R', 'IL7R|p.D278Ifs*17|1|0.19|ENSG00000168685|chr5:35875539-35875539|C/-|frameshift_variant', 'nc|ENSG00000168685|P16871-2|IL7R', 'ENSG00000168685|ENST00000303115|IL7R'] 86329 10386 QIVSFYFKLFK True H1975_Epitope_Rep3 1418.7962087600197 1418.7951099358602 45.006 2 -0.6422060864318359 0.19377559885813578 1.0 ['ENSG00000111537|ENST00000229135|IFNG'] 86931 7995 QLTVQVAYYTM True H1975_Epitope_Rep1 1315.6482241969898 1315.6471299358602 35.702 2 -0.6422441908782285 0.1937881067998821 1.0 ['SPATA17|p.S229Lfs*23|1|0.34|ENSG00000162814|chr1:217774497-217774497|G/-|frameshift_variant', 'SPATA17|p.A265Qfs*7|1|0.35|ENSG00000162814|chr1:217782242-217782242|G/-|frameshift_variant', 'ENSG00000162814|ENST00000366933|SPATA17'] 99590 21615 SIEVGLVSI True PC9_epitope_Rep3 915.52769805815 915.52660993586 88.439 2 -0.6422719008294779 0.19380061435353255 1.0 ['FGF9|p.A101E|1|0.55|ENSG00000102678|chr13:21681066-21681066|C/A|missense_variant'] 59664 8358 LGAITLHLTP True NCI_RA007_Epitope_Rep5 1034.6124307416198 1034.61132993586 38.82 2 -0.6423562361372198 0.19384414899393412 1.0 ['ENSG00000174326|ENST00000574600|SLC16A11', 'nc|ENSG00000174326|Q8NCK7|SLC16A11'] 115376 3751 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 20.87 3 -0.6423821169176269 0.19385364794216658 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 58505 9766 LEQEKLSGV True PC9_epitope_Rep1 1001.5393253710098 1001.53822993586 42.426 2 -0.6424003721356237 0.19385364794216658 1.0 ['ENSG00000164603|ENST00000297145|BMT2'] 3725 6164 AGSEDWGQAP True PC9_epitope_Rep2 1016.4199385143198 1016.41884993586 29.102 2 -0.6424721864367999 0.19386314630097887 1.0 ['ENST00000263708.6_1_2:120517626-120517854:+|nuORF'] 105320 9714 SRPGYPSP True H1975_Epitope_Rep3 859.41881631551 859.41770993586 42.384 2 -0.6425115621114968 0.19386314630097887 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2', 'nc|ENSG00000169398|Q05397-2|PTK2'] 3163 8612 AGDSAAVSS True H1975_Epitope_Rep3 763.3348119080301 763.33426496793 38.117 1 -0.6425417037967842 0.19387565152643335 1.0 ['OGFR|p.A472S|1|0.31|ENSG00000060491|chr20:62813029-62813029|G/T|missense_variant'] 68661 19479 LTITDTQLV True PC9_epitope_Rep4 1002.5597264624199 1002.55862993586 83.043 2 -0.6425949569751893 0.1939191809509036 1.0 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 35633 17843 GTDGFVINL True PC9_epitope_Rep2 934.47599683846 934.47488993586 73.932 2 -0.6426919625396675 0.19400021715863439 1.0 ['ENSG00000100079|ENST00000215886|LGALS2'] 16609 10455 EEPFHLVI True PC9_epitope_Rep1 982.5123823471798 982.51128993586 45.102 2 -0.6426977017361475 0.19400021715863439 1.0 ['ENST00000480058.5_1_6:4064966-4065116:+|nuORF'] 7454 6058 ASALYNEGK True NCI_RA007_Epitope_Rep5 951.4661604307499 951.46506993586 29.984 2 -0.642734885669774 0.19400021715863439 1.0 ['ENST00000342206.10_1_X:69385887-69385983:+|nuORF'] 42581 8975 IEFVCEVLDFK True H1975_Epitope_Rep1 1340.6686252883999 1340.66698490379 39.427 3 -0.6427388023091248 0.19400021715863439 1.0 ['nc|ENSG00000123908|Q9UKV8-2|AGO2', 'ENSG00000123908|ENST00000220592|AGO2'] 101637 9440 SLLRMMLGI True NCI_RA007_Epitope_Rep2 1032.58239356664 1032.58128993586 41.331 2 -0.6427657576999897 0.19402221119245563 1.0 ['ENSG00000255974|ENST00000301141|CYP2A6'] 66996 19905 LSPKTTISV True PC9_epitope_Rep5 944.55424715916 944.55314993586 81.619 2 -0.6427907928328506 0.19402221119245563 1.0 ['ENST00000474985.5_1_2:33809845-33813599:-|nuORF', 'ENSG00000119812|ENST00000238823|FAM98A'] 12792 6023 DLFCVTFTT True PC9_epitope_Rep5 1045.47903361357 1045.4779299358602 28.161 2 -0.642799987653254 0.19402221119245563 1.0 ['ENST00000569190.1_1_16:19536438-19536558:+|nuORF'] 41784 16977 IARGRRKP True H1975_Epitope_Rep2 952.6042660997599 952.60316993586 70.55 2 -0.6428609031114486 0.19404420317952695 1.0 ['ENST00000273920.7_1_4:83351753-83351975:+|nuORF'] 106961 8565 SVEDVVSPNK True H1975_Epitope_Rep1 1072.540053647 1072.53894993586 37.871 2 -0.6428916363126417 0.19404420317952695 1.0 ['ENST00000396604.5_1_11:9482393-9494227:+|nuORF'] 45416 8684 IQGGFRCLAF True PC9_epitope_Rep5 1110.56443500338 1110.56332993586 38.345 2 -0.6428989160301923 0.19404420317952695 1.0 ['nc|ENSG00000077942|P23142-2|FBLN1', 'nc|ENSG00000077942|P23142-3|FBLN1', 'nc|ENSG00000077942|P23142-4|FBLN1', 'ENSG00000077942|ENST00000327858|FBLN1', 'ENST00000476366.1_1_22:45937122-45946826:+|nuORF'] 76243 10804 NPEWLFRIY True PC9_epitope_Rep4 1236.62914343492 1236.6274949037902 49.316 3 -0.6430299642609494 0.19411272061788518 1.0 ['ENSG00000144647|ENST00000344697|POMGNT2'] 87064 8405 QNIEILEDQIR True H1975_Epitope_Rep1 1369.7201432672898 1369.71904993586 37.257 2 -0.6430364513799429 0.19411272061788518 1.0 ['ENSG00000153347|ENST00000283357|FAM81B'] 61789 19974 LLAPWTKQF True PC9_epitope_Rep3 1102.6175161220601 1102.61640993586 82.076 2 -0.6430401416593664 0.19411272061788518 1.0 ['ENST00000359774.8_1_2:160139429-160139555:-|nuORF'] 100463 12139 SLAISSSLVS True PC9_epitope_Rep4 962.52842633414 962.5273299358599 54.507 2 -0.6430611566391985 0.19412220843672456 1.0 ['nc|ENSG00000146147|Q5VWP3-2|MLIP', 'nc|ENSG00000146147|Q5VWP3-1|MLIP', 'nc|ENSG00000146147|Q5VWP3-4|MLIP', 'ENST00000511744.1_1_6:53976250-54068425:+|nuORF', 'ENSG00000146147|ENST00000502396|MLIP'] 2638 5628 AESHKSGARHC True H1975_Epitope_Rep2 1181.5359884094098 1181.5343549037902 26.647 3 -0.6430774108620995 0.19412220843672456 1.0 ['nc|ENSG00000183696|Q16831-2|UPP1'] 131240 18664 VTEYYISGD True PC9_epitope_Rep4 1045.46040634397 1045.4593099358601 79.869 2 -0.6431388247338536 0.19414419304312763 1.0 ['ENSG00000158615|ENST00000367188|PPP1R15B'] 65976 15376 LSDVRDTLI True PC9_epitope_Rep4 1030.56587447202 1030.56476993586 67.076 2 -0.6431424376028569 0.19414419304312763 1.0 ['nc|ENSG00000141576|Q96PX1-2|RNF157', 'ENSG00000141576|ENST00000269391|RNF157'] 42347 7144 IEANSQHYQK True NCI_RA007_Epitope_Rep1 1216.58364979448 1216.58254993586 31.779 2 -0.6431537986083169 0.19414419304312763 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 101738 17814 SLNKAVPVSV True PC9_epitope_Rep3 1012.5916952970399 1012.59058993586 73.718 2 -0.6431624733748301 0.19415367915018997 1.0 ['nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'ENSG00000187742|ENST00000375807|SECISBP2'] 57089 14483 LDSMQPKHLP True PC9_epitope_Rep1 1164.59612905448 1164.59502993586 60.534 2 -0.6431682032813862 0.19415367915018997 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'nc|ENSG00000081177|Q9NVH0-2|EXD2'] 60101 13790 LGLTDHAEL True PC9_epitope_Rep1 967.49746055903 967.49636993586 57.888 2 -0.6432156468973163 0.19416617560400706 1.0 ['OR5J2|p.C97Sfs*21|1|0.27|ENSG00000174957|chr11:56176907-56176907|G/-|frameshift_variant', 'OR5J2|p.A25Sfs*97|1|0.25|ENSG00000174957|chr11:56176685-56176686|-/A|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 117921 9548 TWSPASEP True H1975_Epitope_Rep2 873.38684748089 873.3862949679301 41.699 1 -0.6433003996147764 0.19417264959915645 1.0 ['ENST00000244769.8_1_6:16303126-16303444:-|nuORF'] 137396 15645 YDYLRDWGP True PC9_epitope_Rep1 1183.52982331647 1183.5281849037901 64.999 3 -0.643352556443412 0.19417264959915645 1.0 ['SF3B3-CDH15|1|fusion', 'ENSG00000129910|ENST00000289746|CDH15'] 36355 17953 GVEVAVLRV True PC9_epitope_Rep2 940.5705659296399 940.5700149679301 74.362 1 -0.6433751919448272 0.19417264959915645 1.0 ['nc|ENSG00000135503|P36896-3|ACVR1B'] 4510 5025 AKELSAVHSSH True H1975_Epitope_Rep3 1164.58873517492 1164.5876299358601 24.45 2 -0.6434402842175007 0.19421660593844484 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 71591 4711 M[Oxidation]DC[Carbamidomethyl]QEC[Carbamidomethyl]PEGYR True NCI_RA007_Epitope_Rep2 1459.5166359967297 1459.51552993586 22.952 2 -0.6434546790556273 0.19421660593844484 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 89216 5095 QVTQWPQAPWR True NCI_RA007_Epitope_Rep2 1395.7047679866698 1395.70366993586 24.442 2 -0.6434753508244714 0.19421660593844484 1.0 ['ENST00000270061.11_1_19:18538736-18542208:+|nuORF'] 12846 11440 DLGTAWETCPK True H1975_Epitope_Rep3 1219.5543238121497 1219.5532299358601 49.123 2 -0.6434836130596584 0.19421660593844484 1.0 ['ENST00000468090.5_1_21:45181320-45181410:+|nuORF'] 64410 11837 LPMETPLVVK True PC9_epitope_Rep6 1125.64676764501 1125.64513490379 56.738 3 -0.6434837647752477 0.19421660593844484 1.0 ['ENSG00000165953|ENST00000677451|SERPINA12'] 12560 13999 DKRLLNCFAR True NCI_RA007_Epitope_Rep5 1234.6604606465398 1234.65936993586 60.533 2 -0.6434980086972896 0.19421660593844484 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 117850 21155 TVYGGLMYI True PC9_epitope_Rep4 1015.50485443859 1015.5042749679301 89.535 1 -0.6435352238696039 0.19422006542737097 1.0 ['ENSG00000198642|ENST00000359039|KLHL9'] 78879 13007 PAGAIAPLG True PC9_epitope_Rep4 765.43848913093 765.4379449679301 57.926 1 -0.6435455997166396 0.19422006542737097 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 71514 8216 LYYYRDRDWRW True NCI_RA007_Epitope_Rep1 1690.8004592766597 1690.79936993586 35.957 2 -0.6435865662824458 0.19422006542737097 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 12902 17423 DLKEFTKP True PC9_epitope_Rep1 976.5229470308799 976.52184993586 71.814 2 -0.6436045090701364 0.19422006542737097 1.0 ['nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'ENSG00000127329|ENST00000334414|PTPRB'] 7847 8482 ASWVQRRLREA True NCI_RA007_Epitope_Rep4 1370.75311516142 1370.75200993586 39.429 2 -0.6436612147491636 0.19427304579702956 1.0 ['ENST00000450185.5_1_2:73228706-73298794:-|nuORF'] 111240 25402 THKRIHIG True PC9_epitope_Rep2 960.5617325814399 960.5611849679301 103.39 1 -0.6436813377132387 0.19427304579702956 1.0 ['ZNF730|p.T279I|1|0.19|ENSG00000183850|chr19:23145880-23145880|C/T|missense_variant', 'ENSG00000213988|ENST00000418063|ZNF90'] 134239 10344 VYMHTDSPNTG True NCI_RA007_Epitope_Rep3 1220.51318727616 1220.51208993586 47.752 2 -0.6437048441960839 0.19427304579702956 1.0 ['TBR1|p.P290T|1|0.16|ENSG00000136535|chr2:161418221-161418221|C/A|missense_variant'] 70412 11674 LVTSGVYAWFR True NCI_RA007_Epitope_Rep1 1297.68190728377 1297.68080993586 49.383 2 -0.6437585787060839 0.19429501589024106 1.0 ['ENSG00000116237|ENST00000343813|ICMT'] 125101 6649 VIEQMKEQHHR True NCI_RA007_Epitope_Rep1 1433.71976642781 1433.7186699358601 29.875 2 -0.6437717801980427 0.19429501589024106 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 132069 25661 VTTISLLLLA True PC9_epitope_Rep1 1042.66379760814 1042.6627099358602 103.74 2 -0.6438052152660123 0.19429501589024106 1.0 ['ENST00000250457.7_1_14:34394881-34395019:-|nuORF'] 79779 20317 PEDLASKIL True PC9_epitope_Rep4 984.54916177872 984.54806993586 86.292 2 -0.643852153697039 0.19430750627848573 1.0 ['ENST00000479016.2_1_12:56618280-56618448:+|nuORF'] 100147 14818 SITKGVIYI True PC9_epitope_Rep4 992.5906326678798 992.58952993586 64.934 2 -0.6438730293853849 0.19431698393997643 1.0 ['GPR83|p.I181M|1|0.26|ENSG00000123901|chr11:94393589-94393589|G/C|missense_variant', 'nc|ENSG00000123901|Q9NYM4-2|GPR83', 'ENSG00000123901|ENST00000243673|GPR83'] 111242 24664 THKRIHIG True PC9_epitope_Rep4 960.5617325814399 960.5611849679301 103.36 1 -0.6438742232291647 0.19431698393997643 1.0 ['ZNF730|p.T279I|1|0.19|ENSG00000183850|chr19:23145880-23145880|C/T|missense_variant', 'ENSG00000213988|ENST00000418063|ZNF90'] 111241 25496 THKRIHIG True PC9_epitope_Rep2 960.5617325814399 960.5611849679301 103.75 1 -0.6439027678728221 0.19434497511975074 1.0 ['ZNF730|p.T279I|1|0.19|ENSG00000183850|chr19:23145880-23145880|C/T|missense_variant', 'ENSG00000213988|ENST00000418063|ZNF90'] 138022 18371 YFWRRHPQLQR True H1975_Epitope_Rep3 1585.83784784489 1585.83674993586 77.008 2 -0.643934931090054 0.1943514384920635 1.0 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8'] 6053 14519 APLKQWAVGT True PC9_epitope_Rep6 1069.5920296502097 1069.59092993586 67.732 2 -0.6439356942391582 0.1943514384920635 1.0 ['ENST00000377861.4_3_13:67776616-67776682:-|nuORF'] 5049 19815 ALKYYKEAL True PC9_epitope_Rep4 1097.6120963884498 1097.61098993586 84.346 2 -0.6439444131356953 0.1943514384920635 1.0 ['ENSG00000187862|ENST00000368236|TTC24'] 115378 3879 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 21.55 3 -0.643978003893688 0.19436392665044255 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 30442 25218 GAFFSTLC True PC9_epitope_Rep2 844.3789256494799 844.37782993586 102.67 2 -0.6440113134528197 0.19438588877177754 1.0 ['ENSG00000196208|ENST00000381486|GREB1', 'GREB1|p.A908Gfs*4|1|0.13|ENSG00000196208|chr2:11610744-11610744|C/-|frameshift_variant'] 60477 6069 LGYLYRKFWFK True NCI_RA007_Epitope_Rep3 1519.8339912510698 1519.83235490379 30.855 3 -0.644065174689355 0.19438588877177754 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 67567 9269 LSTSLKLGP True NCI_RA007_Epitope_Rep3 914.54368247546 914.54258993586 43.567 2 -0.6440822783003742 0.19438588877177754 1.0 ['ENSG00000151577|ENST00000383673|DRD3'] 59027 20835 LEVPPPTEKDW True NCI_RA007_Epitope_Rep1 1309.65541775241 1309.65432993586 85.277 2 -0.6441346965952288 0.1943953625344865 1.0 ['nc|ENSG00000140527|Q6P2C0-2|WDR93', 'ENSG00000140527|ENST00000268130|WDR93'] 124867 16211 VHLHWWLWWL True NCI_RA007_Epitope_Rep2 1474.7662460444199 1474.76514993586 67.786 2 -0.6441377117220242 0.1943953625344865 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF', 'ENST00000448867.1_1_X:102001081-102003782:+|nuORF'] 82016 14825 PLVNVAPE True PC9_epitope_Rep2 837.45961849833 837.45852993586 62.287 2 -0.6442153656644305 0.19441732149222735 1.0 ['ENSG00000206107|ENST00000382835|KRTAP27-1'] 65547 19366 LRRQLWIWKFR True PC9_epitope_Rep5 1600.9466700178798 1600.94445987172 79.538 4 -0.6442156439624777 0.19441732149222735 1.0 ['ENST00000464415.1_1_2:33817123-33824435:-|nuORF'] 130970 3666 VTDLQNETQTK True NCI_RA007_Epitope_Rep2 1275.63065955655 1275.62902490379 18.908 3 -0.6442246709746293 0.19441732149222735 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF', 'nc|ENSG00000080031|Q9HD43-3|PTPRH'] 12908 8050 DLKGPEVDLKG True PC9_epitope_Rep1 1169.62920300457 1169.6275649037902 35.786 3 -0.6442946804161798 0.19444530547720157 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant'] 101224 18023 SLHIDGKIF True PC9_epitope_Rep5 1028.5654805492 1028.5643899358602 74.342 2 -0.6443684584871362 0.19445779024533888 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'LYST|p.G2193Efs*38|1|0.28|ENSG00000143669|chr1:235759275-235759275|C/-|frameshift_variant'] 18942 8162 ELEHLQYK True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 36.336 2 -0.6445041838364367 0.1945167689541876 1.0 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 43583 4368 IGSPSFQDK True NCI_RA007_Epitope_Rep4 977.48181049489 977.48070993586 23.15 2 -0.6445431347823279 0.1945262374856647 1.0 ['ENST00000452761.1_1_2:110745136-110745940:-|nuORF'] 111759 8172 TIIQKHYP True PC9_epitope_Rep2 998.5549158655001 998.55380993586 36.789 2 -0.6445685526873218 0.1945262374856647 1.0 ['RNF168|p.T479Hfs*9|1|0.07|ENSG00000163961|chr3:196472100-196472100|T/-|frameshift_variant', 'ENSG00000163961|ENST00000318037|RNF168'] 30799 13907 GANKVIEGL True PC9_epitope_Rep5 899.5076313199098 899.50652993586 58.513 2 -0.6446139077126273 0.19453570543020085 1.0 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 109971 13425 TEIANLLKE True H1975_Epitope_Rep3 1029.57062549929 1029.57007496793 56.909 1 -0.6446192677012406 0.19453570543020085 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS', 'nc|ENSG00000170345|P01100-2|FOS'] 93416 3681 RQEVAMMRNR True NCI_RA007_Epitope_Rep3 1289.6444933125697 1289.6428349037901 20.477 3 -0.6446219341899361 0.1945481876365665 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 44860 8527 INGTVYLSEKD True H1975_Epitope_Rep3 1237.6190322436898 1237.61792993586 37.785 2 -0.6446551968953802 0.19455463955866856 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'PCDH9|p.L1216Wfs*4|1|0.35|ENSG00000184226|chr13:66304723-66304723|G/-|frameshift_variant', 'ENSG00000184226|ENST00000377865|PCDH9'] 70064 18870 LVNGERDLL True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 77.949 2 -0.6446629302948369 0.19455463955866856 1.0 ['ENST00000529460.1_1_11:118272380-118277657:+|nuORF'] 49777 11380 KHCFRRREHK True H1975_Epitope_Rep1 1395.7418392850698 1395.74074993586 48.752 2 -0.644666224973888 0.19455463955866856 1.0 ['ENST00000266880.11_1_12:133417602-133417977:-|nuORF'] 69862 17527 LVHRTYRKDQP True PC9_epitope_Rep1 1411.7684308723897 1411.76732993586 72.212 2 -0.6447176854691956 0.19457357134002728 1.0 ['ENSG00000204920|ENST00000270014|ZNF155', 'nc|ENSG00000204920|Q12901-2|ZNF155'] 129789 24356 VRRKGLGK True NCI_RA007_Epitope_Rep4 912.5981180901598 912.5975649679301 105.68 1 -0.6447193274447951 0.19457357134002728 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 61845 7745 LLAVSLHG True PC9_epitope_Rep2 808.48068829608 808.47958993586 35.166 2 -0.6447196445621286 0.19457357134002728 1.0 ['MLT1A0_dup14514|chr11:77043130-77043424:-|1.355721760678524|0.4643796430535307|1.55|511.0|20|3|anti-sense'] 79167 20505 PAMSQYITV True PC9_epitope_Rep4 1008.4950180308799 1008.49392993586 87.022 2 -0.644796831198647 0.19457357134002728 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'ENST00000237724.9_1_1:220369588-220445709:-|nuORF'] 22490 14048 ETFRRWHQKRR True PC9_epitope_Rep3 1598.8654595750597 1598.8638149037902 59.125 3 -0.6448552656329122 0.19460154639973967 1.0 ['ENST00000467796.5_1_22:51221718-51237143:+|nuORF', 'ENST00000480246.1_1_22:51222460-51237143:+|nuORF'] 85156 7559 QEMVTFQD True NCI_RA007_Epitope_Rep4 996.4222470134398 996.4216949679301 35.723 1 -0.6449340835524519 0.194666955888505 1.0 ['ZNF19|p.E17Q|1|0.13|ENSG00000157429|chr16:71478990-71478990|C/G|missense_variant'] 76866 7214 NRDLATPVM-[Oxidation] True PC9_epitope_Rep1 1031.50698007735 1031.50588993586 32.563 2 -0.6449416826389047 0.194666955888505 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 129790 25289 VRRKGLGK True PC9_epitope_Rep4 912.5981180901598 912.5975649679301 106.08 1 -0.6449435154192317 0.194666955888505 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 99823 9570 SILAMHAQDP True H1975_Epitope_Rep1 1081.52262976105 1081.5215299358601 41.734 2 -0.6449640530048525 0.194666955888505 1.0 ['ENST00000508918.5_1_4:16504706-16675844:-|nuORF', 'nc|ENSG00000169744|O43679-2|LDB2', 'nc|ENSG00000169744|O43679-3|LDB2', 'ENSG00000169744|ENST00000304523|LDB2', 'nc|ENSG00000198728|Q86U70-3|LDB1', 'nc|ENSG00000198728|Q86U70-2|LDB1', 'ENSG00000198728|ENST00000673968|LDB1'] 122842 21980 VGGVMTKLI True PC9_epitope_Rep5 916.54157430048 916.54046993586 89.578 2 -0.6450035436965884 0.194694927334139 1.0 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000442006.2_1_1:39175842-39176013:+|nuORF'] 128342 10967 VPQGLWVL True PC9_epitope_Rep5 910.5276384885 910.52654993586 47.173 2 -0.6450881050601727 0.19476937855383233 1.0 ['ENST00000225760.5_1_17:62075843-62079332:+|nuORF'] 902 5547 ADLPHTYDP True NCI_RA007_Epitope_Rep2 1027.46107505031 1027.45996993586 26.194 2 -0.645129042661738 0.1947758187958975 1.0 ['DHX34|p.R98H|1|0.12|ENSG00000134815|chr19:47353323-47353323|G/A|missense_variant'] 26921 7677 FLDHINGK True NCI_RA007_Epitope_Rep3 942.49231560894 942.49120993586 37.316 2 -0.6451599712412635 0.1947758187958975 1.0 ['ENSG00000146007|ENST00000274712|ZMAT2'] 82011 12226 PLVKGVSV True PC9_epitope_Rep1 797.50108938749 797.49998993586 51.887 2 -0.6452111999189976 0.1947758187958975 1.0 ['ENST00000394111.6_1_2:73143891-73161080:+|nuORF'] 115967 3451 TSIEVGVK True NCI_RA007_Epitope_Rep5 831.4701831820299 831.46908993586 19.027 2 -0.6453764380997387 0.19486273780752308 1.0 ['ENSG00000185668|ENST00000373012|POU3F1'] 81508 19274 PLGTQLSV True PC9_epitope_Rep1 813.45961849833 813.45852993586 78.94 2 -0.6454281308767533 0.19486273780752308 1.0 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 123933 23432 VGRTRFLRA True PC9_epitope_Rep3 1074.6410455312998 1074.6399499358602 95.409 2 -0.6454511914996829 0.19487219209914794 1.0 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 4764 10671 ALDSEDAPV True PC9_epitope_Rep3 915.4185415319898 915.41744993586 45.992 2 -0.6454631784769133 0.19487219209914794 1.0 ['nc|ENSG00000179886|Q53EQ6-2|TIGD5', 'ENSG00000179886|ENST00000504548|TIGD5'] 110321 6321 TETGLTLLISK True NCI_RA007_Epitope_Rep1 1174.68090422426 1174.6792649037902 28.612 3 -0.6454917772460748 0.19489713719172141 1.0 ['ENST00000423222.5_1_1:211599560-211605712:+|nuORF'] 85514 20783 QGAFGYVL True PC9_epitope_Rep5 853.4334037504899 853.4328549679301 84.993 1 -0.6455129631563452 0.19489713719172141 1.0 ['ENSG00000010270|ENST00000009041|STARD3NL', 'nc|ENSG00000010270|O95772-2|STARD3NL'] 87634 6067 QQQSQASEI True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 28.732 2 -0.6455425088403259 0.19491906126558747 1.0 ['ENSG00000151773|ENST00000444614|CCDC122', 'nc|ENSG00000151773|Q5T0U0-2|CCDC122', 'ENST00000476570.2_1_13:44430578-44443512:-|nuORF'] 31547 8906 GEDVAVKIFSS True H1975_Epitope_Rep3 1150.58700383942 1150.5859099358602 39.256 2 -0.6455775410896077 0.19491906126558747 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C'] 29680 20335 FVLKKRTFTKG True PC9_epitope_Rep3 1323.8026911227896 1323.8015899358602 83.469 2 -0.6456105561404745 0.19491906126558747 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'ENST00000493438.5_1_9:135973976-135976008:-|nuORF'] 13742 10223 DQDDDFEFTG True NCI_RA007_Epitope_Rep4 1187.4254773872299 1187.42438993586 46.178 2 -0.6456244122751614 0.19493153231303054 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 69384 21293 LTVYIKNIF True PC9_epitope_Rep1 1109.64848189717 1109.64738993586 86.731 2 -0.6456381525706011 0.1949409833018371 1.0 ['ENSG00000131558|ENST00000253861|EXOC4'] 60699 17731 LHPLVSPTV True PC9_epitope_Rep6 961.5596668927701 961.55856993586 80.835 2 -0.6456667355640656 0.1949409833018371 1.0 ['ENST00000578199.5_1_17:37873700-37873802:+|nuORF'] 82846 27750 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 113.87 3 -0.6457139913634315 0.19495345343019563 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 91767 25109 RKFVGGPG True NCI_RA007_Epitope_Rep5 816.4606215578398 816.46007496793 104.08 1 -0.6458386350774716 0.19502486020972415 1.0 ['ENSG00000203740|ENST00000439373|NTMT2'] 114057 16223 TPEMRSYHFRK True NCI_RA007_Epitope_Rep1 1450.71395277138 1450.71284993586 67.212 2 -0.645877371697216 0.19502486020972415 1.0 ['ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-3|TCAF2', 'nc|ENSG00000170379|A6NFQ2-2|TCAF2', 'ENSG00000283528|ENST00000636941|TCAF2C'] 139514 13053 YLSLHPQV True PC9_epitope_Rep4 955.5127167003501 955.51160993586 58.103 2 -0.6459603964260627 0.19508379542145535 1.0 ['PDE10A|p.W446Cfs*60|1|0.33|ENSG00000112541|chr6:165396370-165396370|C/-|frameshift_variant', 'PDE10A|p.H485Ifs*21|1|0.2|ENSG00000112541|chr6:165395204-165395204|A/-|frameshift_variant', 'ENSG00000112541|ENST00000539869|PDE10A', 'nc|ENSG00000112541|Q9Y233-1|PDE10A', 'nc|ENSG00000112541|Q9Y233-2|PDE10A'] 19727 19081 ELRRLRRLLWD True NCI_RA007_Epitope_Rep2 1524.9001137482799 1524.89900993586 79.077 2 -0.6459726317499961 0.19509626256524634 1.0 ['ENSG00000105538|ENST00000222145|RASIP1', 'ENST00000601530.1_1_19:49224057-49228265:-|nuORF'] 33039 16338 GIKKAAENI True PC9_epitope_Rep1 942.5498304850599 942.54872993586 67.663 2 -0.6460795048081792 0.19511515170288227 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 82849 28183 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 116.28 3 -0.6461234730342831 0.19511515170288227 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 100134 16649 SISWSEPAV True PC9_epitope_Rep2 974.4709114580198 974.46980993586 69.284 2 -0.6461297267835632 0.19511515170288227 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 82850 28243 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 116.61 3 -0.6461795431385905 0.19511515170288227 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 56069 5325 LATFWYYAK True NCI_RA007_Epitope_Rep1 1161.5858816406098 1161.58478993586 24.79 2 -0.6462287957315109 0.19514310494362533 1.0 ['ENST00000534385.1_1_11:118272380-118277824:+|nuORF', 'ENSG00000167283|ENST00000300688|ATP5MG', 'ENST00000527186.1_1_11:118277587-118279810:+|nuORF'] 82833 27223 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 114.23 3 -0.6463473526133197 0.1952020319348294 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 81324 11937 PLALLGGLTA True PC9_epitope_Rep5 924.56441792004 924.56332993586 50.913 2 -0.6463739694028203 0.19522467560620607 1.0 ['ENSG00000270806|ENST00000605587|C17orf50'] 113355 7799 TLRRRIEPWEF True NCI_RA007_Epitope_Rep3 1501.8153810648098 1501.81372490379 37.8 3 -0.6463813483526665 0.19522467560620607 1.0 ['ENSG00000111701|ENST00000229304|APOBEC1'] 81768 25022 PLPLIKVMLLI True H1975_Epitope_Rep2 1248.82433808416 1248.82270490379 102.82 3 -0.6464718959325921 0.19522467560620607 1.0 ['ENST00000555357.1_1_12:56361683-56362031:+|nuORF'] 82852 28557 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 118.35 3 -0.6464751855067572 0.19522467560620607 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 57724 8559 LEELKWKK True PC9_epitope_Rep4 1072.62808080576 1072.6269899358601 40.402 2 -0.6464819656917125 0.19522467560620607 1.0 ['BTN1A1|p.A416Efs*11|1|0.35|ENSG00000124557|chr6:26508840-26508840|C/-|frameshift_variant', 'ENSG00000124557|ENST00000684113|BTN1A1'] 15012 19948 DYKGDATVFFI True PC9_epitope_Rep2 1274.6183039676998 1274.61720993586 82.129 2 -0.6464902056736698 0.19522467560620607 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 56087 7733 LATQAEQQEW True NCI_RA007_Epitope_Rep1 1202.5567663403 1202.5556699358601 34.073 2 -0.6465307709132069 0.19522467560620607 1.0 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12', 'nc|ENSG00000109118|Q96QT6-4|PHF12'] 82344 25062 PPLCFFLLLL True NCI_RA007_Epitope_Rep1 1174.68242487774 1174.68132993586 103.72 2 -0.6465735290297909 0.19522467560620607 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000600281.1_1_19:12776145-12777515:-|nuORF', 'ENST00000466794.5_1_19:12769146-12777470:-|nuORF'] 1498 3566 AEELRENLR True H1975_Epitope_Rep3 1128.58873517492 1128.5870849037901 18.69 3 -0.6465747422798459 0.19522467560620607 1.0 ['ENSG00000185271|ENST00000636854|KLHL33'] 13811 9988 DQKWRWQLEKE True NCI_RA007_Epitope_Rep1 1544.7735758224796 1544.77246993586 42.857 2 -0.646576571310941 0.19522467560620607 1.0 ['TCHH|p.E880K|1|0.04|ENSG00000159450|chr1:152110579-152110579|C/T|missense_variant'] 70406 8666 LVTLEGIVT True NCI_RA007_Epitope_Rep5 943.55899818643 943.5584449679301 40.004 1 -0.6465774521742654 0.19522467560620607 1.0 ['ENST00000534988.1_1_11:63996737-63997202:-|nuORF'] 62348 16368 LLGLKKLSFYY True NCI_RA007_Epitope_Rep1 1343.78530972315 1343.7842099358602 67.781 2 -0.6465827511954462 0.19522467560620607 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 82854 28681 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 119.04 3 -0.6465924229975818 0.19522467560620607 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 98890 8765 SGVTITEL True PC9_epitope_Rep5 818.43854870058 818.43744993586 38.657 2 -0.6466067098744833 0.19523713670780235 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.K1083Qfs*87|1|0.22|ENSG00000116147|chr1:175355505-175355506|-/G|frameshift_variant', 'TNR|p.R569Dfs*85|1|0.22|ENSG00000116147|chr1:175386104-175386104|G/-|frameshift_variant', 'TNR|p.P387Q|1|0.31|ENSG00000116147|chr1:175396624-175396624|G/T|missense_variant'] 15111 4876 EAAAAAPAP True H1975_Epitope_Rep2 767.38136817763 767.3808149679301 23.842 1 -0.6466350008089808 0.19524959742351047 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant'] 127233 10756 VLWLPHWGLY True H1975_Epitope_Rep1 1282.6862643882198 1282.6851699358601 46.334 2 -0.6466660854583066 0.19525903446567366 1.0 ['ENSG00000163933|ENST00000296292|RFT1'] 58947 12417 LETRDGQVL True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 53.07 2 -0.6466727922286811 0.19525903446567366 1.0 ['ENSG00000073282|ENST00000264731|TP63', 'nc|ENSG00000073282|Q9H3D4-11|TP63', 'ENST00000460036.1_1_3:189507541-189590785:+|nuORF', 'nc|ENSG00000073282|Q9H3D4-6|TP63', 'nc|ENSG00000073282|Q9H3D4-9|TP63', 'nc|ENSG00000073282|Q9H3D4-8|TP63', 'nc|ENSG00000073282|Q9H3D4-2|TP63', 'nc|ENSG00000073282|Q9H3D4-12|TP63', 'nc|ENSG00000073282|Q9H3D4-4|TP63', 'nc|ENSG00000073282|Q9H3D4-5|TP63', 'nc|ENSG00000073282|Q9H3D4-3|TP63', 'nc|ENSG00000073282|Q9H3D4-10|TP63', 'nc|ENSG00000073282|Q9H3D4-7|TP63'] 82836 27598 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 116.27 3 -0.646693967803584 0.1952839536756054 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 67488 7543 LSSTQPTR True NCI_RA007_Epitope_Rep3 888.46649478392 888.46538993586 36.79 2 -0.6467003607541972 0.1952839536756054 1.0 ['ENSG00000131381|ENST00000253699|RBSN'] 58805 9495 LESLVLKLS True H1975_Epitope_Rep1 1000.61684741572 1000.61574993586 41.443 2 -0.6467105478508184 0.1952933890695154 1.0 ['nc|ENSG00000165458|O15357-2|INPPL1', 'ENSG00000165458|ENST00000298229|INPPL1'] 19948 6273 ELVPSIMSNL True NCI_RA007_Epitope_Rep4 1101.57399662757 1101.57288993586 30.733 2 -0.6467377322174358 0.1952933890695154 1.0 ['ENSG00000111696|ENST00000392876|NT5DC3'] 62361 19518 LLGPLSVTG True PC9_epitope_Rep1 855.50656869075 855.50546993586 79.896 2 -0.6467485771802447 0.1953058475639021 1.0 ['ENSG00000184933|ENST00000641196|OR6A2'] 61288 7028 LIPRVEQQNTK True NCI_RA007_Epitope_Rep5 1324.7462984454799 1324.7452099358602 33.712 2 -0.6467663692907591 0.19531528184168565 1.0 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant', 'nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 82838 27724 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 116.95 3 -0.6468095062003388 0.19531528184168565 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 60555 3272 LHEEEKSYLWR True NCI_RA007_Epitope_Rep2 1488.7361276845998 1488.7344749037902 17.384 3 -0.6468406896875296 0.19534019660964472 1.0 ['ENSG00000112343|ENST00000357085|TRIM38'] 122241 15138 VGAQNGILI True PC9_epitope_Rep5 883.5127167003499 883.51160993586 63.233 2 -0.6468485904761785 0.19534019660964472 1.0 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-5|ATP7A'] 20206 7356 ENIWKLCEYIK True NCI_RA007_Epitope_Rep5 1437.7326225272898 1437.7309649037902 34.975 3 -0.6468834829205533 0.19534660515805444 1.0 ['ENSG00000156795|ENST00000287387|NTAQ1', 'ENST00000517609.5_1_8:124429070-124447771:+|nuORF', 'ENST00000519199.5_2_8:124429089-124447771:+|nuORF', 'ENST00000523551.1_1_8:124429070-124460295:+|nuORF'] 57599 7690 LEEAEHKVQSL True NCI_RA007_Epitope_Rep2 1281.65648038157 1281.65538993586 34.538 2 -0.6468939835904602 0.19534660515805444 1.0 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'nc|ENSG00000257923|P39880-4|CUX1', 'ENSG00000257923|ENST00000292535|CUX1', 'nc|ENSG00000257923|P39880-2|CUX1', 'nc|ENSG00000257923|P39880-5|CUX1', 'nc|ENSG00000257923|P39880-3|CUX1', 'nc|ENSG00000257923|P39880-6|CUX1', 'ENST00000465461.6_1_7:101747665-101768865:+|nuORF', 'ENST00000497815.5_1_7:101459310-101755188:+|nuORF', 'ENST00000485792.1_1_7:101754981-101758554:+|nuORF'] 20498 6194 EPLSPGEIRFI True H1975_Epitope_Rep1 1256.67648755016 1256.67484490379 28.894 3 -0.6469229238144767 0.19534660515805444 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026'] 13503 7420 DNLQLVKQKLE True NCI_RA007_Epitope_Rep1 1326.7507151195798 1326.7490549037902 32.858 3 -0.6469684030967426 0.19535301311125214 1.0 ['MYH7|p.R1212L|1|0.29|ENSG00000092054|chr14:23419936-23419936|C/A|missense_variant'] 82839 27915 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 117.97 3 -0.6469828137954711 0.19535301311125214 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 23838 10336 EYILDKISK True PC9_epitope_Rep2 1107.6175756917098 1107.61646993586 45.084 2 -0.6470047301038822 0.19535301311125214 1.0 ['ENSG00000065308|ENST00000182527|TRAM2'] 121779 5560 VFNSRTAY True NCI_RA007_Epitope_Rep3 956.4715801643599 956.47048993586 28.864 2 -0.6470731477404951 0.195418311276217 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 63419 9271 LLVPDVAK True NCI_RA007_Epitope_Rep2 853.5273041353299 853.52620993586 40.672 2 -0.6470784162084222 0.195418311276217 1.0 ['nc|ENSG00000170476|Q8WU39-2|MZB1'] 14711 14538 DVLKFLAA True H1975_Epitope_Rep3 875.5116540711899 875.51054993586 61.288 2 -0.6470841134133876 0.195418311276217 1.0 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 82840 28044 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 118.66 3 -0.6471000512862958 0.195418311276217 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 105193 14740 SRGGGGGG True PC9_epitope_Rep4 603.27248643499 603.2719349679301 64.631 1 -0.6472043295838089 0.19546172182150265 1.0 ['CON__Q6IFZ6', 'ENST00000258111.4_1_12:70760395-70760632:+|nuORF', 'CON__REFSEQ:XP_932229', 'ENSG00000188573|ENST00000338333|FBLL1', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'MCU|p.R94Lfs*2|1|0.33|ENSG00000156026|chr10:72859236-72859237|-/T|frameshift_variant', 'ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 80601 10625 PGQLKILTG True PC9_epitope_Rep6 925.55966689277 925.55856993586 51.687 2 -0.6472473555217644 0.19547417462504063 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 82841 28234 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 119.67 3 -0.647271659787358 0.19548360135584825 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 19643 15948 ELQYYLSL True PC9_epitope_Rep2 1027.52261267771 1027.5215099358602 66.592 2 -0.6472802657467531 0.19548360135584825 1.0 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant'] 5575 6297 ANEMFRIFS True NCI_RA007_Epitope_Rep5 1113.5277151414898 1113.52660993586 30.9 2 -0.6473012415091104 0.19551153072279834 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 62847 4324 LLMCEIPMVEL True PC9_epitope_Rep2 1289.6433391406897 1289.64169490379 21.972 3 -0.6473054631672363 0.19552095585959264 1.0 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'ENST00000470655.5_1_22:37578844-37581961:-|nuORF'] 49919 11866 KIIYIVHDEV True PC9_epitope_Rep4 1227.6863239578702 1227.68467490379 53.418 3 -0.6473201157776112 0.19552095585959264 1.0 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3'] 15550 7050 EAPSLRPAPP True H1975_Epitope_Rep2 1033.55564414149 1033.5545499358602 32.044 2 -0.647334156431886 0.1955643601132899 1.0 ['ENSG00000171564|ENST00000302068|FGB', 'FGB|p.A136Lfs*16|1|0.07|ENSG00000171564|chr4:154566586-154566586|A/-|frameshift_variant'] 19257 13304 ELKERFMRLYK True H1975_Epitope_Rep1 1511.8282542476297 1511.82714993586 56.279 2 -0.6474234902089795 0.1955862325120713 1.0 ['ENSG00000074935|ENST00000368662|TUBE1', 'ENST00000605457.5_1_6:112392617-112397333:-|nuORF'] 142535 19851 YYKDQFSLL True PC9_epitope_Rep5 1175.58627556343 1175.5851699358602 81.406 2 -0.6474552756520107 0.1955862325120713 1.0 ['ENSG00000258890|ENST00000556440|CEP95', 'nc|ENSG00000258890|Q96GE4-2|CEP95', 'ENST00000581885.1_1_17:62532731-62533407:+|nuORF', 'ENST00000553956.6_1_17:62527116-62533894:+|nuORF'] 57754 16132 LEEPKCLEI True PC9_epitope_Rep1 1072.54744752656 1072.54634993586 66.868 2 -0.6474596047824748 0.1955862325120713 1.0 ['nc|ENSG00000170468|Q9H6W3-2|RIOX1', 'ENSG00000170468|ENST00000304061|RIOX1'] 47799 9585 IYFNDYWNLQK True H1975_Epitope_Rep3 1502.7194149912996 1502.7183099358601 41.879 2 -0.6474880567576882 0.1955896007428041 1.0 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 79626 10887 PDLVNVIK True H1975_Epitope_Rep1 896.53311779176 896.53202993586 46.837 2 -0.6475070248108226 0.1955896007428041 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000493342.1_1_X:24745055-24752029:+|nuORF'] 129340 25294 VRAAHLRL True PC9_epitope_Rep4 934.58246802602 934.58136993586 106.1 2 -0.6475160210068758 0.1955896007428041 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 119323 9432 VANKIESIP True PC9_epitope_Rep2 969.5494961318899 969.54838993586 41.619 2 -0.6475201629373065 0.1955896007428041 1.0 ['nc|ENSG00000163564|Q6K0P9-3|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1', 'PYHIN1|p.S122Kfs*7|1|0.15|ENSG00000163564|chr1:158938493-158938494|-/A|frameshift_variant', 'nc|ENSG00000163564|Q6K0P9-5|PYHIN1'] 33511 18856 GLDQSLVSL True PC9_epitope_Rep4 930.5022115863 930.50110993586 80.616 2 -0.6476127827536533 0.19563030931344486 1.0 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 123145 19484 VGKRCRCP True PC9_epitope_Rep2 917.4687607967298 917.46766993586 80.327 2 -0.6476138751370576 0.19563030931344486 1.0 ['ENST00000377327.8_1_20:20028515-20028989:-|nuORF'] 47025 6153 ITREASKEIP True H1975_Epitope_Rep3 1142.62953735774 1142.62844993586 28.68 2 -0.6476187865016263 0.19563030931344486 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 83424 21502 PTLSYVPDL True PC9_epitope_Rep5 1003.5226126777098 1003.52150993586 87.743 2 -0.6476528002928068 0.19563030931344486 1.0 ['ENST00000303277.6_1_4:1718369-1718675:-|nuORF'] 72279 14473 MIAGQVSKP True NCI_RA007_Epitope_Rep5 929.50043776449 929.49988496793 62.352 1 -0.6476690896902249 0.19563030931344486 1.0 ['nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'POU6F2|p.S38Rfs*6|1|0.16|ENSG00000106536|chr7:39085952-39085953|TT/-|frameshift_variant', 'POU6F2|p.P88Hfs*10|1|0.15|ENSG00000106536|chr7:39204302-39204302|C/-|frameshift_variant', 'ENST00000517348.1_1_7:39125465-39413102:+|nuORF'] 137113 24483 YARYRRTW True PC9_epitope_Rep4 1170.6046600225798 1170.60301490379 102.66 3 -0.6476719037177232 0.19563030931344486 1.0 ['nc|ENSG00000171777|Q8TDF6-7|RASGRP4', 'nc|ENSG00000171777|Q8TDF6-8|RASGRP4', 'ENST00000592322.5_1_19:38901850-38916815:-|nuORF', 'nc|ENSG00000171777|Q8TDF6-2|RASGRP4', 'ENSG00000171777|ENST00000615439|RASGRP4'] 18231 5647 EINSRKIHGEK True NCI_RA007_Epitope_Rep2 1309.7102472899298 1309.70860490379 26.58 3 -0.647675694848826 0.19563030931344486 1.0 ['nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 41894 14863 IDAEHPSDDYF True PC9_epitope_Rep6 1307.53061116211 1307.52950993586 69.147 2 -0.6476906095522784 0.19564275546202883 1.0 ['ENSG00000154262|ENST00000284425|ABCA6', 'nc|ENSG00000154262|Q8N139-2|ABCA6'] 32249 10397 GEYVGSPSAP True H1975_Epitope_Rep2 962.4345259492999 962.43342993586 45.004 2 -0.647821929688231 0.19574198140211355 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF', 'LYST|p.W3469C|1|0.23|ENSG00000143669|chr1:235697240-235697240|C/A|missense_variant'] 64701 11809 LPVSSNPPP True PC9_epitope_Rep2 906.4810822188999 906.47998993586 50.754 2 -0.6478322389187198 0.19574198140211355 1.0 ['nc|ENSG00000175877|Q6UE05-2|TMEM270'] 59394 22529 LFLLQPTV True PC9_epitope_Rep3 929.55860426361 929.55750993586 91.934 2 -0.647843098445349 0.19574198140211355 1.0 ['NXPH1|p.E80*|1|0.04|ENSG00000122584|chr7:8751189-8751190|-/AT|frameshift_variant', 'NXPH1|p.P79Qfs*7|1|0.05|ENSG00000122584|chr7:8751188-8751189|-/AATG|frameshift_variant', 'ENSG00000122584|ENST00000405863|NXPH1'] 67016 12563 LSPPKYNVL True PC9_epitope_Rep2 1029.58588164061 1029.58478993586 53.632 2 -0.6478861774958791 0.1957544250526055 1.0 ['ENST00000608023.5_1_1:207977039-207977294:-|nuORF'] 111748 13110 TIIDEDKTAYT True PC9_epitope_Rep4 1268.6136125100797 1268.61196490379 58.321 3 -0.6479140148217964 0.19576686831804185 1.0 ['UNC13C|p.M1811Nfs*3|1|0.56|ENSG00000137766|chr15:54511798-54511799|-/A|frameshift_variant', 'UNC13C|p.Q1943Pfs*8|1|0.09|ENSG00000137766|chr15:54549637-54549638|-/C|frameshift_variant', 'UNC13C|p.K2204Nfs*2|1|0.09|ENSG00000137766|chr15:54627080-54627081|AT/-|frameshift_variant', 'ENSG00000137766|ENST00000260323|UNC13C', 'ENST00000561210.1_1_15:54556427-54709226:+|nuORF'] 111875 20377 TINPRLQRHFR True PC9_epitope_Rep5 1436.8112987438801 1436.81020993586 83.416 2 -0.6479565597732948 0.19580722518759186 1.0 ['DNAH9|p.S2611R|1|0.19|ENSG00000007174|chr17:11784311-11784311|C/A|missense_variant'] 114195 18523 TPLILSVKP True PC9_epitope_Rep3 966.61136811246 966.61026993586 76.466 2 -0.6479752957647918 0.19580722518759186 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549'] 63512 10947 LLYEYVGKR True PC9_epitope_Rep4 1139.6338944621898 1139.63278993586 49.876 2 -0.6479827395691826 0.1958075495049505 1.0 ['ENSG00000274180|ENST00000611551|NATD1'] 126208 8261 VLGFGTKYLKE True PC9_epitope_Rep4 1253.70197402201 1253.70031490379 39.237 3 -0.6480367284797866 0.1958075495049505 1.0 ['ENST00000266434.8_1_12:12247552-12251919:+|nuORF', 'ENSG00000121380|ENST00000308721|BCL2L14'] 19163 14946 ELHLVHWNAVR True PC9_epitope_Rep4 1372.73640246812 1372.7353099358602 65.43 2 -0.6480560114506707 0.1958075495049505 1.0 ['ENSG00000169239|ENST00000318636|CA5B'] 5023 8951 ALIGGLPMPYP True H1975_Epitope_Rep3 1127.6049028330299 1127.60380993586 39.428 2 -0.6480604095447409 0.1958075495049505 1.0 ['nc|ENSG00000117751|Q12972-2|PPP1R8', 'ENSG00000117751|ENST00000311772|PPP1R8', 'nc|ENSG00000117751|Q12972-3|PPP1R8', 'ENST00000486634.2_1_1:28176630-28178160:+|nuORF'] 86459 9788 QKQQQQREYRF True NCI_RA007_Epitope_Rep1 1537.77497280481 1537.77331490379 42.075 3 -0.6480644894684741 0.1958075495049505 1.0 ['ENSG00000116138|ENST00000375847|DNAJC16', 'DNAJC16|p.K597*|1|0.22|ENSG00000116138|chr1:15567107-15567108|-/T|frameshift_variant'] 102170 13498 SLRSSTPEI True PC9_epitope_Rep2 988.5189242796 988.51782993586 57.207 2 -0.6481764277318162 0.1958973406970808 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 140691 6395 YRWLWWQPWWW True NCI_RA007_Epitope_Rep2 1791.8462872702696 1791.84463490379 29.484 3 -0.6482560075717082 0.19594071965595125 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 58395 16016 LENQIYQP True H1975_Epitope_Rep2 1003.4974605590301 1003.49636993586 66.805 2 -0.6483410494469202 0.19596862769364046 1.0 ['ENST00000318887.7_1_3:88205589-88205667:+|nuORF'] 79311 10487 PAQRGRRARRG True NCI_RA007_Epitope_Rep2 1279.74461616639 1279.7435099358602 45.385 2 -0.648383946073738 0.19598106552812325 1.0 ['ENST00000377126.3_1_9:73028468-73028720:-|nuORF'] 32773 8523 GHDEFSMQAL True PC9_epitope_Rep5 1133.48115887189 1133.48006993586 37.726 2 -0.6483966031480335 0.19599350297780185 1.0 ['SPTBN2|p.T782M|1|0.29|ENSG00000173898|chr11:66704931-66704931|G/A|missense_variant'] 34076 7524 GLWIWRYQEKK True NCI_RA007_Epitope_Rep2 1505.8143184356497 1505.81266490379 33.893 3 -0.6484286153532729 0.1959938128383604 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 132323 19678 VTYIVHQSAI True PC9_epitope_Rep5 1129.61315901761 1129.61206993586 80.745 2 -0.6484309657206697 0.1959938128383604 1.0 ['ENSG00000197177|ENST00000392607|ADGRA1', 'nc|ENSG00000197177|Q86SQ6-1|ADGRA1'] 3753 9162 AGSRGLPEL True PC9_epitope_Rep3 898.4872302284999 898.48612993586 40.182 2 -0.6484401790492037 0.1959938128383604 1.0 ['nc|ENSG00000159753|Q6F5E8-2|CARMIL2', 'ENSG00000159753|ENST00000334583|CARMIL2', 'ENST00000602321.5_1_16:67685605-67685749:+|nuORF'] 67182 21105 LSRARDWDWEK True H1975_Epitope_Rep3 1460.7160609463597 1460.7149699358602 88.154 2 -0.6484413189612688 0.1959938128383604 1.0 ['SLC32A1|p.A293D|1|0.13|ENSG00000101438|chr20:38727939-38727939|C/A|missense_variant'] 92596 8855 RMREYYITMVK True H1975_Epitope_Rep1 1488.7581260824797 1488.7570299358601 38.984 2 -0.64849051818585 0.1959938128383604 1.0 ['ENSG00000130226|ENST00000377770|DPP6', 'nc|ENSG00000130226|P42658-2|DPP6'] 13800 14981 DQIYRRETERK True H1975_Epitope_Rep1 1492.7746384516397 1492.77354993586 62.869 2 -0.6485494406368757 0.19601868465012684 1.0 ['ENST00000285279.9_1_7:55540109-55540292:-|nuORF'] 12120 16373 DIDATTTETY True H1975_Epitope_Rep1 1128.48226398736 1128.4811699358602 68.337 2 -0.6485676313753534 0.19601868465012684 1.0 ['JPH2|p.T601Nfs*41|1|0.4|ENSG00000149596|chr20:44115873-44115874|-/T|frameshift_variant', 'ENSG00000149596|ENST00000372980|JPH2', 'JPH3|p.W292*|1|0.17|ENSG00000154118|chr16:87644750-87644750|G/-|frameshift_variant', 'ENSG00000154118|ENST00000284262|JPH3'] 78078 8186 NVVKDSWYSK True NCI_RA007_Epitope_Rep2 1224.6138872936 1224.61278993586 36.477 2 -0.6486202923599662 0.1960405227747274 1.0 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 43324 11057 IFVWIQYEGRW True NCI_RA007_Epitope_Rep2 1495.76122023363 1495.76012993586 47.605 2 -0.6486349404600914 0.1960405227747274 1.0 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 119493 25634 VARSILGGG True PC9_epitope_Rep2 828.4817509252398 828.48120496793 104.29 1 -0.6486440677493397 0.1960405227747274 1.0 ['ENST00000372695.5_1_X:102470037-102470112:+|nuORF'] 82138 16141 PNIFEMLQERQ True NCI_RA007_Epitope_Rep2 1403.68673496403 1403.68562993586 67.511 2 -0.6487495450050881 0.19604992498878698 1.0 ['ENSG00000002746|ENST00000395891|HECW1', 'nc|ENSG00000002746|Q76N89-2|HECW1'] 13501 11374 DNLLEQNLIRV True PC9_epitope_Rep3 1325.7303140281701 1325.72866490379 48.753 3 -0.6487536858701435 0.19604992498878698 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion', 'ENST00000493026.2_1_17:30804487-30806484:+|nuORF'] 9457 12912 AVVGSSVLQ True PC9_epitope_Rep5 858.4810822188999 858.47998993586 54.677 2 -0.6487800973960732 0.19606235887283863 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 87121 20765 QNVRLIEV True PC9_epitope_Rep2 969.5607295219298 969.55962993586 85.315 2 -0.6488539856958919 0.19608722548716362 1.0 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'nc|ENSG00000168071|A6NC98-5|CCDC88B', 'ENST00000494080.5_1_11:64109984-64120281:+|nuORF', 'nc|ENSG00000168071|A6NC98-2|CCDC88B', 'ENST00000463837.5_1_11:64107738-64120281:+|nuORF'] 40899 10530 HSNRIYRMI True PC9_epitope_Rep6 1188.61859583456 1188.61693490379 51.294 3 -0.6489197239424511 0.19608722548716362 1.0 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 79035 15973 PALICLHPLFI True PC9_epitope_Rep5 1235.71003660791 1235.7089299358602 66.429 2 -0.649023966057593 0.19610602499072127 1.0 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 65493 27193 LRLLRLKLK True NCI_RA007_Epitope_Rep3 1151.8230326445498 1151.82139490379 119.48 3 -0.6490492222868097 0.19610602499072127 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 44741 13544 ILYETKTKPD True NCI_RA007_Epitope_Rep4 1206.64960409598 1206.6485099358601 59.304 2 -0.6490601869148073 0.19610602499072127 1.0 ['ENST00000589123.5_2_19:3465565-3466177:+|nuORF'] 48835 7056 KDVQDELRIK True NCI_RA007_Epitope_Rep3 1242.6932002434598 1242.6921099358601 34.872 2 -0.6490626604781182 0.19610602499072127 1.0 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 65494 27277 LRLLRLKLK True NCI_RA007_Epitope_Rep3 1151.8230326445498 1151.82139490379 119.95 3 -0.6491290797080962 0.19611845666125416 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 71184 22544 LYNLPAEIPC True PC9_epitope_Rep5 1131.56343194387 1131.56287496793 91.721 1 -0.6493097484204536 0.19620820833204466 1.0 ['ENSG00000128274|ENST00000642412|A4GALT'] 45651 15910 IRELYRRRYPR True H1975_Epitope_Rep3 1576.9062617578797 1576.9051699358602 66.646 2 -0.649346764838815 0.19622699860831916 1.0 ['nc|ENSG00000078043|O75928-2|PIAS2'] 107436 8685 SVLRAFAARP True H1975_Epitope_Rep1 1086.62981214126 1086.6287099358601 38.337 2 -0.649372729325772 0.19622699860831916 1.0 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5'] 27108 15747 FLHKFWFF True PC9_epitope_Rep5 1170.6014721351 1170.59983490379 65.571 3 -0.6493752863001179 0.19622699860831916 1.0 ['nc|ENSG00000168216|Q9NUN5-3|LMBRD1', 'ENSG00000168216|ENST00000649934|LMBRD1'] 120254 11551 VECRRERRWDR True H1975_Epitope_Rep3 1559.7851606490299 1559.78406993586 49.559 2 -0.6493809546911629 0.19622699860831916 1.0 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF'] 61920 14765 LLDEVFFSEK True NCI_RA007_Epitope_Rep1 1225.6230549949698 1225.6219499358601 61.49 2 -0.6494203526919534 0.19623942725487467 1.0 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF', 'ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4'] 125698 24077 VKPQHRVPRP True NCI_RA007_Epitope_Rep2 1212.7203584811598 1212.7187249037902 101.16 3 -0.6494370866213658 0.19625185551707075 1.0 ['ENSG00000164500|ENST00000297001|SPATA48'] 22731 12918 ETSVEHLI True PC9_epitope_Rep5 926.4709114580198 926.46980993586 54.7 2 -0.6494545250958521 0.19625517966479064 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 78956 15805 PAHVLPSAAF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 65.783 2 -0.6494564539732108 0.19625517966479064 1.0 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 137757 20279 YENLKWTLERK True PC9_epitope_Rep5 1478.7881632574597 1478.78706993586 83.055 2 -0.64948126429181 0.19625517966479064 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57', 'CCDC57|p.E177Sfs*20|1|0.5|ENSG00000176155|chr17:82195352-82195352|C/-|frameshift_variant'] 19785 14088 ELSFSSSTMSF True PC9_epitope_Rep1 1221.5223549775299 1221.5206949037902 59.021 3 -0.6494883151138963 0.19625517966479064 1.0 ['ENST00000555343.2_1_20:30948221-30948338:+|nuORF'] 103777 7325 SPVVPAPR True PC9_epitope_Rep2 821.47593726881 821.47484993586 33.558 2 -0.6495739318616118 0.1962830681695193 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 3200 7369 AGELALEQGP True H1975_Epitope_Rep2 983.4923751785898 983.49182496793 33.285 1 -0.6497873252204499 0.19643464547450445 1.0 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3'] 19369 11181 ELLQDEETLLS True NCI_RA007_Epitope_Rep5 1288.63982725792 1288.63872993586 49.642 2 -0.6497997104139328 0.19644706937336692 1.0 ['JADE2|p.D663Afs*5|1|0.16|ENSG00000043143|chr5:134578932-134578932|A/-|frameshift_variant', 'nc|ENSG00000043143|Q9NQC1-2|JADE2', 'nc|ENSG00000043143|Q9NQC1|JADE2', 'ENSG00000043143|ENST00000681547|JADE2'] 139260 16138 YLIKDIRFL True PC9_epitope_Rep5 1179.7015800991899 1179.6999449037899 67.063 3 -0.6499558004185568 0.19647495361781075 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000466614.1_1_22:30983271-30987820:-|nuORF'] 137392 5989 YDYFQIKMQNY True H1975_Epitope_Rep2 1511.67550157399 1511.67440993586 28.015 2 -0.6499880400815927 0.19653071952011378 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9', 'SAMD9|p.T529Hfs*5|1|0.05|ENSG00000205413|chr7:93104516-93104516|G/-|frameshift_variant'] 5586 6193 ANGPRGERQT True NCI_RA007_Epitope_Rep5 1084.5373683084 1084.5362699358602 30.5 2 -0.6500052243707801 0.19653071952011378 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 83918 17059 PVQELPPS True PC9_epitope_Rep3 865.4545331178899 865.45342993586 70.77 2 -0.6500265838647817 0.19654314116537575 1.0 ['ENSG00000100319|ENST00000344318|ZMAT5'] 106648 5662 STSRQFVDGP True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 26.808 2 -0.6501622473321773 0.19661740152124174 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'ENST00000548158.1_1_12:50393384-50398020:-|nuORF'] 16113 8031 EEALHQFRSGK True H1975_Epitope_Rep3 1300.6523980606396 1300.6513099358601 35.864 2 -0.6502848707904866 0.19670711911571462 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 140052 18891 YQHFRRLL True PC9_epitope_Rep4 1131.63014649443 1131.6290499358602 80.75 2 -0.6503389033881839 0.1967349967535479 1.0 ['MFRP|p.G522V|1|0.19|ENSG00000235718|chr11:119341723-119341723|C/A|missense_variant', 'nc|ENSG00000235718|Q9BY79-2|MFRP', 'ENSG00000235718|ENST00000619721|MFRP'] 29516 11804 FVGAATVFGI True H1975_Epitope_Rep2 980.5331177917599 980.53202993586 50.48 2 -0.6503408685957506 0.19674741447276886 1.0 ['ENSG00000103569|ENST00000219919|AQP9', 'AQP9|p.L252Ffs*16|1|0.21|ENSG00000103569|chr15:58183999-58184000|-/T|frameshift_variant'] 53631 8517 KRYAWKRRWFV True NCI_RA007_Epitope_Rep1 1594.8997198254597 1594.8980849037903 37.13 3 -0.6503859581522242 0.1967598318080633 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 69387 8390 LTWDTCYFHYL True PC9_epitope_Rep1 1460.6434731697202 1460.6418149037902 37.108 3 -0.650431895563958 0.19677224875944907 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1'] 39923 9596 HPGVITMAA True PC9_epitope_Rep6 895.4585729525099 895.45746993586 47.227 2 -0.65046886900074 0.1967846653269439 1.0 ['PSKH2|p.W319G|1|0.11|ENSG00000147613|chr8:86048665-86048665|A/C|missense_variant'] 63894 22168 LNPAQKLML True PC9_epitope_Rep1 1026.5895871220598 1026.58848993586 90.086 2 -0.6505262226433801 0.19681253961138334 1.0 ['nc|ENSG00000147050|O15550|KDM6A', 'ENSG00000147050|ENST00000611820|KDM6A', 'KDM6A|p.F1372Lfs*4|1|0.2|ENSG00000147050|chrX:45110187-45110187|T/-|frameshift_variant', 'KDM6A|p.G656Wfs*2|1|0.52|ENSG00000147050|chrX:45069619-45069620|-/T|frameshift_variant'] 94295 23409 RRRHRAAH True PC9_epitope_Rep4 1058.6070600644198 1058.60596993586 98.323 2 -0.6505786527583888 0.19682191272626096 1.0 ['ENST00000405515.5_2_11:67957596-67981223:-|nuORF'] 73132 22872 MRPRLWLLLAA True PC9_epitope_Rep4 1338.79583192054 1338.79472993586 96.195 2 -0.6505977583806922 0.19682191272626096 1.0 ['ENSG00000254126|ENST00000643224|CD8B2', 'nc|ENSG00000172116|P10966-7|CD8B', 'nc|ENSG00000172116|P10966-9|CD8B', 'nc|ENSG00000172116|P10966-8|CD8B', 'ENSG00000172116|ENST00000390655|CD8B', 'nc|ENSG00000172116|P10966-3|CD8B', 'nc|ENSG00000172116|P10966-2|CD8B', 'nc|ENSG00000172116|P10966-6|CD8B', 'nc|ENSG00000172116|P10966-4|CD8B'] 142143 25088 YVRLQLGG True NCI_RA007_Epitope_Rep5 904.5130510535198 904.51250496793 104.0 1 -0.6506535381822073 0.19685307119230888 1.0 ['ENSG00000168758|ENST00000305476|SEMA4C', 'ENST00000467747.1_1_2:97526365-97527817:-|nuORF', 'ENST00000474420.1_1_2:97526365-97527817:-|nuORF'] 108975 7446 TAFLQRPSRAG True NCI_RA007_Epitope_Rep3 1202.6520041378199 1202.65090993586 36.41 2 -0.6506942597286968 0.19685307119230888 1.0 ['ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2'] 49868 18859 KIEVLEQEL True PC9_epitope_Rep3 1099.61249031127 1099.6119749679299 77.765 1 -0.6507217208478773 0.19685307119230888 1.0 ['DSP|p.E1039Q|1|0.93|ENSG00000096696|chr6:7579305-7579305|G/C|missense_variant'] 121399 18584 VEVSLGLPAL True PC9_epitope_Rep1 996.5855472874398 996.58444993586 76.272 2 -0.6507264034169628 0.19685307119230888 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 22217 8848 ESYKTQYRA True H1975_Epitope_Rep3 1144.55128703704 1144.55018993586 39.039 2 -0.6507377901020283 0.19685307119230888 1.0 ['ENSG00000129518|ENST00000250454|EAPP'] 12196 14004 DIFTTIGSV True PC9_epitope_Rep4 951.49131254943 951.49020993586 61.775 2 -0.6507513811511545 0.19686244204018546 1.0 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-5|CRB1', 'ENST00000484075.5_1_1:197411604-197447006:+|nuORF'] 136510 26505 WVVRLGGRG True PC9_epitope_Rep1 998.5773826455797 998.57628993586 107.59 2 -0.6507519502950617 0.19686244204018546 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 102288 21909 SLSLSRPGRI True PC9_epitope_Rep5 1084.63529144452 1084.6341899358601 89.313 2 -0.650776806335068 0.19687181230873851 1.0 ['ENST00000592537.5_2_19:36230817-36230898:-|nuORF'] 73131 23682 MRPRLWLLLAA True PC9_epitope_Rep2 1338.79583192054 1338.79472993586 96.567 2 -0.6508048030228735 0.19687181230873851 1.0 ['ENSG00000254126|ENST00000643224|CD8B2', 'nc|ENSG00000172116|P10966-7|CD8B', 'nc|ENSG00000172116|P10966-9|CD8B', 'nc|ENSG00000172116|P10966-8|CD8B', 'ENSG00000172116|ENST00000390655|CD8B', 'nc|ENSG00000172116|P10966-3|CD8B', 'nc|ENSG00000172116|P10966-2|CD8B', 'nc|ENSG00000172116|P10966-6|CD8B', 'nc|ENSG00000172116|P10966-4|CD8B'] 64147 13843 LPEVQVTQNP True H1975_Epitope_Rep3 1123.58733819259 1123.58624993586 58.555 2 -0.6509793527775654 0.19696150101231782 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 130837 7882 VTATSTHISP True H1975_Epitope_Rep3 1012.5189242796 1012.51782993586 35.296 2 -0.6510183009954921 0.19698936696340258 1.0 ['nc|ENSG00000031003|Q9NYF5-3|FAM13B', 'nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B'] 62304 6653 LLGAGAEY True H1975_Epitope_Rep2 792.40176926904 792.40122496793 30.498 1 -0.6510425093587002 0.19700177729696314 1.0 ['ENST00000487292.1_3_15:42134104-42135875:+|nuORF', 'ENST00000491746.5_1_15:42134104-42137535:+|nuORF'] 102091 10749 SLRGRRRPR True PC9_epitope_Rep5 1152.7064397525198 1152.7048049037899 46.338 3 -0.6510659617393905 0.1970141872469323 1.0 ['ENSG00000188263|ENST00000695950|IL17REL'] 99459 21253 SIASEWFLI True PC9_epitope_Rep3 1064.55424715916 1064.5531499358601 87.043 2 -0.6511705516376574 0.19708863889232292 1.0 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 80773 10053 PHKEESAP True PC9_epitope_Rep3 893.4242956187699 893.42318993586 43.625 2 -0.6511751217765579 0.19708863889232292 1.0 ['PLIN1|p.D195H|1|0.4|ENSG00000166819|chr15:89669995-89669995|C/G|missense_variant'] 63337 17655 LLTGLALPTL True PC9_epitope_Rep6 1010.6375828603 1010.63648993586 80.549 2 -0.651198358820404 0.19708863889232292 1.0 ['ENSG00000179921|ENST00000519574|GPBAR1'] 130773 10292 VTAEDLHLEKE True H1975_Epitope_Rep1 1282.6404959642598 1282.6393899358602 44.532 2 -0.6512304450449243 0.19708863889232292 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF'] 63269 21058 LLSPGSVLVL True PC9_epitope_Rep2 996.62193279616 996.62138496793 86.454 1 -0.6512332432799794 0.19708863889232292 1.0 ['ENST00000498749.1_1_2:73114531-73115553:+|nuORF', 'SPR|p.T135Lfs*5|1|0.14|ENSG00000116096|chr2:72888411-72888411|G/-|frameshift_variant', 'ENSG00000116096|ENST00000234454|SPR'] 84807 5692 QEAEKNVQQNV True H1975_Epitope_Rep2 1285.62624288245 1285.62514993586 26.893 2 -0.6512410905779412 0.19708863889232292 1.0 ['ENST00000359481.8_1_2:88051819-88053081:+|nuORF'] 117110 16073 TVKCHLDL True PC9_epitope_Rep1 927.4847877003499 927.48368993586 66.64 2 -0.6512892893067225 0.19716285754021604 1.0 ['ENST00000298159.10_1_14:35182006-35182069:-|nuORF'] 44411 11438 ILGETTLRRY True H1975_Epitope_Rep1 1220.6877209402 1220.68662993586 48.976 2 -0.6512953393190863 0.1971752634669469 1.0 ['ENST00000509581.5_1_5:276829-276922:+|nuORF'] 24788 19483 FATEFTKVF True PC9_epitope_Rep5 1088.55424715916 1088.5531499358601 79.994 2 -0.651336357872928 0.19721857374642665 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 12530 7001 DKKKPSPPAP True NCI_RA007_Epitope_Rep3 1063.6025943339098 1063.6014899358602 34.648 2 -0.6514470243640855 0.19724033499181062 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 85458 8335 QFEKWWDK True NCI_RA007_Epitope_Rep1 1165.55564414149 1165.5545499358602 36.421 2 -0.651447675424011 0.19724033499181062 1.0 ['nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 95316 25614 RVRLLPLL True NCI_RA007_Epitope_Rep5 978.6702204012598 978.66912993586 106.07 2 -0.6514948472974875 0.19724033499181062 1.0 ['ENSG00000164326|ENST00000296777|CARTPT', 'nc|ENSG00000011478|Q9NXS2-3|QPCTL', 'ENSG00000011478|ENST00000012049|QPCTL'] 48731 6381 KDDKSLVP True NCI_RA007_Epitope_Rep2 900.4916469025999 900.49054993586 29.428 2 -0.6515048410457313 0.19725273876295987 1.0 ['ENST00000301318.7_1_19:57059230-57060426:+|nuORF'] 56726 19370 LDLEWRSGL True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 79.883 2 -0.6516415261914721 0.19732694684796045 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.G1584V|1|0.15|ENSG00000198753|chrX:153776377-153776377|G/T|missense_variant'] 71682 6428 MEDALPPSL True PC9_epitope_Rep1 971.46338354943 971.46228993586 29.531 2 -0.6517779018731801 0.1974166035753465 1.0 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX'] 23005 5608 EVFEFMVYEVP True H1975_Epitope_Rep1 1387.6369908069498 1387.63534490379 26.639 3 -0.6518362691467523 0.19742900404808256 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 60036 10156 LGKSNLAEL True PC9_epitope_Rep5 943.5338460677499 943.53274993586 44.052 2 -0.6518956828018194 0.19747230505384486 1.0 ['ENST00000413171.6_1_7:872152-892516:+|nuORF', 'ENST00000475971.5_1_7:892198-892516:+|nuORF'] 79618 16899 PDLSKHDFL True PC9_epitope_Rep2 1070.5396597241802 1070.53856993586 70.247 2 -0.6519383788612709 0.19751560472158705 1.0 ['ENSG00000124772|ENST00000244751|CPNE5'] 46108 12309 ISHYLTQE True NCI_RA007_Epitope_Rep3 989.48181049489 989.48070993586 55.593 2 -0.6519724771150989 0.19754974663206032 1.0 ['ENSG00000167216|ENST00000683218|KATNAL2'] 70091 24234 LVPAMLWGL True PC9_epitope_Rep3 998.5623097450599 998.56120993586 98.517 2 -0.6519860256495589 0.19754974663206032 1.0 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 112748 5676 TLHIYQYRMEK True H1975_Epitope_Rep1 1480.7496695737598 1480.74802490379 26.9 3 -0.651986496649935 0.19754974663206032 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B', 'KIF26B|p.A1114Vfs*2|1|0.6|ENSG00000162849|chr1:245686323-245686324|GC/-|frameshift_variant'] 131258 14752 VTFHLYLI True PC9_epitope_Rep6 1004.5695033004799 1004.56840993586 68.693 2 -0.6519880406939912 0.19754974663206032 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1', 'NLRP1|p.P1254S|1|0.2|ENSG00000091592|chr17:5521547-5521547|G/A|missense_variant'] 57361 13531 LEAIENNKY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 57.168 2 -0.652085728285699 0.19762393981059495 1.0 ['ENSG00000065548|ENST00000337859|ZC3H15'] 121216 11311 VESSTCQTSCY True H1975_Epitope_Rep1 1206.4532894415402 1206.4521899358601 48.485 2 -0.6521163720902259 0.1976487309017318 1.0 ['KRTAP13-1|p.P75T|1|0.43|ENSG00000198390|chr21:30396309-30396309|C/A|missense_variant'] 35342 12221 GRSWAFRLPWM True H1975_Epitope_Rep3 1405.7077451921298 1405.70664993586 52.181 2 -0.6521334418961554 0.1976487309017318 1.0 ['ENST00000381470.7_1_8:21939551-21939809:+|nuORF'] 15845 9744 EDFDHFCSCY True H1975_Epitope_Rep2 1264.4165100100001 1264.41540993586 42.468 2 -0.6521650580937427 0.19765807238966215 1.0 ['nc|ENSG00000156970|O60566-2|BUB1B', 'ENSG00000156970|ENST00000287598|BUB1B', 'nc|ENSG00000156970|O60566-3|BUB1B'] 29870 11077 FVTLRVFCVF True NCI_RA007_Epitope_Rep1 1229.6630864154897 1229.6619899358602 47.084 2 -0.6521719779181514 0.19765807238966215 1.0 ['KCND3|p.R293C|1|0.4|ENSG00000171385|chr1:111981850-111981850|G/A|missense_variant'] 60704 15316 LHPVSAIISL True PC9_epitope_Rep2 1048.62808080576 1048.6269899358601 64.194 2 -0.6521771470187984 0.19767675363393422 1.0 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 55825 15603 LAPGSLLGAA True PC9_epitope_Rep4 868.5018176634799 868.50072993586 67.941 2 -0.6521826653943912 0.19767675363393422 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3', 'SALL3|p.L652Cfs*2|1|0.52|ENSG00000256463|chr18:78993939-78993939|G/-|frameshift_variant'] 770 7322 AAVRETHKRVP True H1975_Epitope_Rep3 1262.7207524039798 1262.7190949037902 33.139 3 -0.6521947855538097 0.19767675363393422 1.0 ['ENSG00000186310|ENST00000373079|NAP1L3'] 78041 9747 NVSVVDLTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep2 1161.58120754576 1161.58010993586 42.534 2 -0.6522121937784758 0.19767675363393422 1.0 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 5047 12042 ALKTKERMAL True PC9_epitope_Rep5 1159.6747137283498 1159.6730549037902 51.313 3 -0.6522383664784102 0.19768914702338658 1.0 ['nc|ENSG00000049283|Q9H201-2|EPN3', 'ENST00000512291.5_1_17:48613811-48618261:+|nuORF', 'ENSG00000049283|ENST00000268933|EPN3', 'ENST00000512379.5_1_17:48610205-48619515:+|nuORF'] 3594 9650 AGNKVGSSFP True NCI_RA007_Epitope_Rep4 962.4821448480599 962.48104993586 43.97 2 -0.6522568896037153 0.19770154002996648 1.0 ['nc|ENSG00000185436|Q8IU57-3|IFNLR1'] 114742 12286 TQKEQEEK True PC9_epitope_Rep5 1018.4931034545799 1018.49200993586 52.246 2 -0.6523182196710845 0.19770171753367108 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant', 'WDFY3|p.N1161Kfs*4|1|0.29|ENSG00000163625|chr4:84794523-84794524|-/T|frameshift_variant', 'ENST00000426414.6_1_4:85730999-85781744:-|nuORF', 'ENST00000504990.1_1_4:85771028-85781672:-|nuORF'] 84552 16452 QASPPEEKVP True PC9_epitope_Rep2 1080.54513902744 1080.5440499358601 68.523 2 -0.652333001164853 0.19770171753367108 1.0 ['nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27', 'ENSG00000159314|ENST00000685559|ARHGAP27', 'nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27'] 46528 6517 ISYNFIEKLK True H1975_Epitope_Rep1 1253.70197402201 1253.70031490379 30.127 3 -0.6523417750891638 0.19770171753367108 1.0 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1'] 16073 9513 EEACRTRSQKR True NCI_RA007_Epitope_Rep2 1362.6786298918198 1362.67752993586 41.617 2 -0.6523498064924909 0.19770171753367108 1.0 ['GATAD2A|p.R457Gfs*2|1|0.18|ENSG00000167491|chr19:19501284-19501284|C/-|frameshift_variant', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 78109 7652 NWEYKTDTDLY True H1975_Epitope_Rep1 1446.63032520338 1446.6292299358602 34.411 2 -0.6523526348450436 0.19770171753367108 1.0 ['ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 38707 7259 HGELGGHP True PC9_epitope_Rep1 802.3722004762601 802.37110993586 32.735 2 -0.6523620850906195 0.19770494841539507 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2'] 116444 16691 TTKSTVNKWTL True PC9_epitope_Rep1 1277.6979512707298 1277.6968499358602 69.029 2 -0.6523768129066153 0.19770494841539507 1.0 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48'] 136206 23952 WRRWRILFKMG True NCI_RA007_Epitope_Rep1 1547.8659771690297 1547.86432490379 99.131 3 -0.6523814720792238 0.19770494841539507 1.0 ['ENST00000467566.1_1_2:109065689-109066146:+|nuORF', 'ENST00000478207.1_1_2:109065689-109068870:+|nuORF', 'ENST00000309863.10_1_2:109065689-109067532:+|nuORF'] 18523 8412 EKIVRITWSNP True NCI_RA007_Epitope_Rep1 1341.7404847890498 1341.73882490379 36.723 3 -0.652389973974884 0.19770494841539507 1.0 ['ENSG00000120053|ENST00000370508|GOT1', 'nc|ENSG00000120053|P17174-2|GOT1'] 46001 6323 ISFREEQEK True NCI_RA007_Epitope_Rep2 1164.5775017848798 1164.57640993586 29.202 2 -0.6524554002319088 0.19771733926392684 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 39189 24327 HIFLWLRWRI True PC9_epitope_Rep4 1438.8349943105798 1438.83388993586 102.06 2 -0.6524750433524096 0.19772972972972974 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 41792 9512 IARSIARAL True PC9_epitope_Rep6 969.6083484206898 969.60724993586 46.848 2 -0.6525423477932629 0.19775450951321966 1.0 ['SAFB2-LONP1|1|fusion', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5696605-5708411:-|nuORF', 'nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'LONP1|p.M552Hfs*3|1|0.14|ENSG00000196365|chr19:5699059-5699060|-/C|frameshift_variant'] 81821 5220 PLPSRPLTP True NCI_RA007_Epitope_Rep5 976.5705659296399 976.56946993586 26.774 2 -0.6525599003803515 0.19775450951321966 1.0 ['ENSG00000182791|ENST00000333861|CCDC87', 'CCDC87|p.K420Nfs*10|1|0.25|ENSG00000182791|chr11:66591759-66591759|G/-|frameshift_variant'] 128248 20296 VPPASSLL True PC9_epitope_Rep5 782.4538048419 782.45270993586 83.119 2 -0.6525814024537444 0.19775773673481994 1.0 ['ENST00000456295.2_1_11:83344252-83393255:-|nuORF'] 104136 7197 SQEKSQDCCK True NCI_RA007_Epitope_Rep5 1154.4696082120197 1154.46850993586 34.362 2 -0.6525894900432936 0.19775773673481994 1.0 ['nc|ENSG00000158321|Q8WXX7-2|AUTS2', 'AUTS2|p.G1229Afs*16|1|0.19|ENSG00000158321|chr7:70790897-70790897|G/-|frameshift_variant', 'ENSG00000158321|ENST00000342771|AUTS2'] 101202 10124 SLHDPPDGAL True NCI_RA007_Epitope_Rep4 1020.4876241513199 1020.48652993586 45.797 2 -0.6526197939528974 0.19775773673481994 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN'] 76018 9067 NLYFEAAFDVP True NCI_RA007_Epitope_Rep2 1284.60265390356 1284.60154993586 39.872 2 -0.6526210732333331 0.19775773673481994 1.0 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD'] 70037 19277 LVNDFLPVI True PC9_epitope_Rep1 1028.5906326678798 1028.5895299358601 78.951 2 -0.6526360257517447 0.1977609635577517 1.0 ['nc|ENSG00000133059|Q6XUX3-3|DSTYK', 'nc|ENSG00000133059|Q6XUX3-2|DSTYK', 'ENSG00000133059|ENST00000367162|DSTYK'] 29119 9791 FTLLTVSSGIT True NCI_RA007_Epitope_Rep3 1137.6281403754099 1137.62650490379 45.576 3 -0.6526378488285016 0.1977609635577517 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 139885 8673 YPSNAICSP True PC9_epitope_Rep1 950.41676771018 950.41566993586 38.2 2 -0.6526832447880879 0.1977609635577517 1.0 ['KRTAP15-1|p.Y36C|1|0.04|ENSG00000186970|chr21:30440434-30440434|A/G|missense_variant'] 34579 7419 GPSVIHSPPP True H1975_Epitope_Rep3 986.5185303567799 986.51742993586 33.515 2 -0.6526858144667058 0.1977609635577517 1.0 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 12637 5788 DLCIEWAGR True NCI_RA007_Epitope_Rep1 1061.4964150132098 1061.4953099358602 26.568 2 -0.652789332657804 0.19778573855038448 1.0 ['nc|ENSG00000284762|O95263-5|PDE8B', 'nc|ENSG00000284762|O95263-2|PDE8B', 'nc|ENSG00000284762|O95263-3|PDE8B', 'nc|ENSG00000284762|O95263-6|PDE8B', 'nc|ENSG00000284762|O95263-4|PDE8B', 'ENSG00000113231|ENST00000264917|PDE8B'] 57860 13698 LEFDFWRREH True PC9_epitope_Rep1 1433.6840325420899 1433.68292993586 57.541 2 -0.6527933965378798 0.19778573855038448 1.0 ['ENST00000520999.6_1_11:44881945-44919311:+|nuORF', 'ENST00000533080.5_1_11:44881945-44940814:+|nuORF', 'ENST00000533786.5_1_11:44881945-44931425:+|nuORF'] 133578 17778 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 77.946 3 -0.6529308797977331 0.1978907709649028 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 77912 19187 NVIHSIFSL True PC9_epitope_Rep5 1028.5654805492 1028.5643899358602 78.842 2 -0.6529760796809898 0.1979031560743623 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'ENST00000498611.5_1_22:50656167-50657252:-|nuORF', 'ENST00000439308.6_1_22:50656167-50658651:-|nuORF', 'ENST00000491449.5_1_22:50656167-50658502:-|nuORF'] 121154 8649 VESALHKYTLY True H1975_Epitope_Rep3 1322.68705223386 1322.6859499358602 38.264 2 -0.6530127992785933 0.19790942918461563 1.0 ['ENST00000546954.1_1_12:120882345-120882465:-|nuORF'] 45048 14016 IPHFFCDLYV True NCI_RA007_Epitope_Rep1 1252.59506642532 1252.59396993586 58.546 2 -0.6530993797616096 0.19790942918461563 1.0 ['OR1Q1|p.A183V|1|0.12|ENSG00000165202|chr9:122615285-122615285|C/T|missense_variant'] 113785 11427 TMVPNQVSL True PC9_epitope_Rep3 987.5059170677499 987.50480993586 48.953 2 -0.6531085549306782 0.19790942918461563 1.0 ['nc|ENSG00000080298|P48380-2|RFX3'] 141715 18203 YTVKTDHLVLL True PC9_epitope_Rep6 1300.73908780672 1300.73798993586 82.658 2 -0.6531372354208391 0.19791875743025214 1.0 ['nc|ENSG00000120341|Q96JE7-2|SEC16B', 'ENSG00000120341|ENST00000308284|SEC16B', 'nc|ENSG00000120341|Q96JE7-3|SEC16B', 'ENST00000327037.8_1_1:177899723-177917737:-|nuORF', 'ENST00000464428.2_1_1:177898995-177929556:-|nuORF', 'ENST00000466953.6_1_1:177898995-177928232:-|nuORF'] 66759 13923 LSLMDVMLV True PC9_epitope_Rep6 1019.5395256951499 1019.53842993586 65.396 2 -0.6531490948341763 0.19791875743025214 1.0 ['ENSG00000177462|ENST00000641945|OR2T8'] 64642 18638 LPTPVLSAS True PC9_epitope_Rep3 883.50148331031 883.50038993586 76.912 2 -0.653206895887138 0.19793114096032113 1.0 ['ENST00000373016.3_1_1:38464750-38464990:-|nuORF'] 137369 9880 YDRYLKLW True NCI_RA007_Epitope_Rep3 1155.6076797143498 1155.60604490379 45.94 3 -0.653239778028752 0.19793741219335217 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 67530 16225 LSTLATKTL True PC9_epitope_Rep6 946.5698972233 946.56880993586 74.771 2 -0.6532603324020287 0.19793741219335217 1.0 ['ENSG00000149927|ENST00000350119|DOC2A', 'ENST00000561671.5_1_16:30017707-30020344:-|nuORF', 'ENST00000564357.5_1_16:30017509-30018480:-|nuORF'] 118867 20718 VAAVAQVEAL True PC9_epitope_Rep4 969.5494961318899 969.54838993586 87.855 2 -0.6532637292481308 0.19793741219335217 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 12135 8109 DIDITQKYV True NCI_RA007_Epitope_Rep2 1093.56554011885 1093.56444993586 36.176 2 -0.6533370753029359 0.19798067125698582 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36573967-36592308:+|nuORF'] 128146 14683 VPLPGPLSS True PC9_epitope_Rep5 865.4909186266101 865.48982993586 61.483 2 -0.653367278770536 0.19798999629492406 1.0 ['ENST00000512163.5_1_5:162864650-162864752:+|nuORF'] 99477 12476 SICVMLVVI True PC9_epitope_Rep2 975.5496964560299 975.54858993586 53.298 2 -0.6533834941581713 0.19798999629492406 1.0 ['ENSG00000228594|ENST00000422725|FNDC10'] 137724 10331 YEMYVSILK True PC9_epitope_Rep6 1144.58383303528 1144.58272993586 50.437 2 -0.6534975391528051 0.19801781496518825 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 17736 9933 EHREVRHTY True PC9_epitope_Rep4 1225.59521753769 1225.59358490379 45.859 3 -0.6535463001709119 0.19803019543672234 1.0 ['ENSG00000180488|ENST00000370791|MIGA1', 'nc|ENSG00000180488|Q8NAN2|MIGA1', 'ENST00000476203.2_1_1:78269082-78324778:+|nuORF', 'nc|ENSG00000180488|Q8NAN2-2|MIGA1'] 105897 8660 SSQKSKTFNK True NCI_RA007_Epitope_Rep2 1153.6091362663299 1153.60802993586 38.332 2 -0.653572291457695 0.19803951836986725 1.0 ['ENSG00000022840|ENST00000325954|RNF10', 'nc|ENSG00000022840|Q8N5U6-2|RNF10'] 13176 13386 DLRTFVNMK True PC9_epitope_Rep2 1122.5855643707798 1122.58390490379 56.77 3 -0.6535752987710156 0.19803951836986725 1.0 ['nc|ENSG00000167604|Q8NI38-3|NFKBID', 'nc|ENSG00000167604|Q8NI38|NFKBID', 'ENSG00000167604|ENST00000606253|NFKBID'] 122609 18088 VGFPKVAII True PC9_epitope_Rep1 942.5902387450599 942.58914993586 74.369 2 -0.6536182189827676 0.1980457836160721 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 36726 16332 GVKFLRRFKQL True NCI_RA007_Epitope_Rep4 1390.85612367798 1390.85502993586 70.818 2 -0.6536325854621605 0.1980457836160721 1.0 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 83735 7972 PVGSQHVSL True NCI_RA007_Epitope_Rep4 922.4872302284999 922.48612993586 37.419 2 -0.6536577722045338 0.1980457836160721 1.0 ['SIGLEC11|p.L442V|1|0.1|ENSG00000161640|chr19:49958682-49958682|G/C|missense_variant'] 17053 5492 EGGIDGPQIAG True H1975_Epitope_Rep2 1012.4825387708798 1012.48144993586 26.138 2 -0.6536988329560931 0.19805204828203624 1.0 ['ENST00000468090.5_1_21:45179072-45179237:+|nuORF'] 133588 18877 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85343490379 79.454 3 -0.6537241370167858 0.19805204828203624 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 116692 13711 TVCWSVLGSL True PC9_epitope_Rep3 1063.5372171960298 1063.5361099358602 57.82 2 -0.6537417361604639 0.19805204828203624 1.0 ['ENST00000457408.6_3_7:44618614-44618746:-|nuORF'] 137219 16044 YAYIWISI True PC9_epitope_Rep1 1027.5378688190299 1027.53676993586 66.528 2 -0.653761881375967 0.19806442650531741 1.0 ['OR51A4|p.H26Y|1|0.12|ENSG00000205497|chr11:4947025-4947025|G/A|missense_variant'] 68875 17783 LTNEGAKAL True PC9_epitope_Rep5 915.5025459394699 915.50144993586 73.42 2 -0.6537931441762791 0.19807068992128415 1.0 ['ENST00000536374.1_1_9:80851502-80863830:+|nuORF', 'nc|ENSG00000148019|Q5JTW2|CEP78', 'ENSG00000148019|ENST00000643273|CEP78', 'nc|ENSG00000148019|Q5JTW2-5|CEP78', 'nc|ENSG00000148019|Q5JTW2-2|CEP78'] 103598 6834 SPSSTTLTSA True PC9_epitope_Rep4 950.4556553167 950.45454993586 33.507 2 -0.6538016850724621 0.19807068992128415 1.0 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 37269 12370 GVRRSFRK True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 54.577 2 -0.6538188874311942 0.19807068992128415 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 126280 6101 VLHRWERK True NCI_RA007_Epitope_Rep1 1122.6410455312998 1122.63940490379 27.769 3 -0.653845376583439 0.19812325405522202 1.0 ['ENSG00000144395|ENST00000389175|CCDC150'] 135274 16107 WFRRFRQRLHP True H1975_Epitope_Rep3 1597.8854667436497 1597.8843699358601 67.414 2 -0.6538800397779149 0.19812325405522202 1.0 ['ENST00000243918.9_1_20:43991669-43991846:+|nuORF'] 129016 5828 VQLPAGVK True PC9_epitope_Rep1 810.49633836022 810.49524993586 27.232 2 -0.6538844457713872 0.19812325405522202 1.0 ['ENSG00000001630|ENST00000003100|CYP51A1'] 64797 18154 LQAVSVSV True PC9_epitope_Rep2 801.45961849833 801.45852993586 75.132 2 -0.6539796709990299 0.19814494721896414 1.0 ['HCRTR1|p.I408Hfs*6|1|0.11|ENSG00000121764|chr1:31626921-31626922|-/C|frameshift_variant', 'ENSG00000121764|ENST00000403528|HCRTR1'] 93345 7283 RPWLGLDHFNK True H1975_Epitope_Rep1 1381.7255034312495 1381.72384490379 33.025 3 -0.6540026692237143 0.19814494721896414 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 115294 25110 TRGKGGGT True NCI_RA007_Epitope_Rep5 732.3878505403999 732.38730496793 104.09 1 -0.6540120689787592 0.19814494721896414 1.0 ['ISM1|p.A400G|1|0.38|ENSG00000101230|chr20:13299263-13299263|C/G|missense_variant'] 128314 10435 VPPPPPPPP True PC9_epitope_Rep1 893.50108938749 893.49998993586 45.026 2 -0.6540304853338155 0.1981573220982453 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1019Efs*12|1|0.21|ENSG00000139734|chr13:59810896-59810896|T/-|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000188316|ENST00000341276|ENO4'] 42569 15863 IEFIYMFL True PC9_epitope_Rep3 1074.54599097458 1074.54488993586 66.167 2 -0.6540912684366834 0.19816969659557393 1.0 ['ATP6V0A2|p.N629Y|1|0.38|ENSG00000185344|chr12:123748735-123748735|A/T|missense_variant'] 80722 12880 PHASYSAYIP True PC9_epitope_Rep5 1104.5240096600398 1104.52290993586 54.553 2 -0.6541290169406919 0.19821293538480533 1.0 ['PCDHGA4|p.L790Sfs*10|1|0.25|ENSG00000262576|chr5:141357473-141357473|C/-|frameshift_variant', 'nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4', 'ENSG00000262576|ENST00000571252|PCDHGA4'] 139600 20432 YLYARPFTPFP True PC9_epitope_Rep3 1370.7023083751797 1370.70067490379 83.846 3 -0.6541456504119041 0.1982222496566411 1.0 ['ENSG00000255713|ENST00000545221|OR4D2'] 14294 4959 DSTVQLAPSPP True H1975_Epitope_Rep3 1110.55570371114 1110.55460993586 24.202 2 -0.6541957253526773 0.1982222496566411 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant'] 62546 9683 LLKGTQAP True PC9_epitope_Rep2 826.4912529797799 826.49014993586 42.585 2 -0.6542242696592108 0.1982500540106787 1.0 ['ENST00000445160.2_1_3:197282243-197282711:-|nuORF'] 87018 7826 QMPELRENP True H1975_Epitope_Rep3 1112.52844341748 1112.52734993586 35.081 2 -0.6543265858390359 0.19826867882603463 1.0 ['CIB2|p.E126Rfs*5|1|0.34|ENSG00000136425|chr15:78105905-78105905|C/-|frameshift_variant', 'nc|ENSG00000136425|O75838-3|CIB2', 'ENSG00000136425|ENST00000258930|CIB2', 'nc|ENSG00000136425|O75838-2|CIB2'] 123070 11790 VGKFPLTT True NCI_RA007_Epitope_Rep3 861.4960040070499 861.49490993586 53.493 2 -0.6543747109213806 0.19826867882603463 1.0 ['ENST00000462315.5_1_3:122274899-122277292:-|nuORF'] 83019 20677 PSIAAAFL True PC9_epitope_Rep5 788.4432401582001 788.44214993586 84.589 2 -0.6543801141932106 0.19826867882603463 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 24921 5822 FCGLDNKQ True NCI_RA007_Epitope_Rep5 923.4171020633501 923.41600993586 29.08 2 -0.6544011270501641 0.19826867882603463 1.0 ['ENST00000591073.1_1_19:37935822-37959899:-|nuORF', 'ENST00000591710.5_1_19:37945970-37958237:-|nuORF'] 5200 7920 ALNHHLHSVKT True H1975_Epitope_Rep3 1255.6785532388299 1255.67744993586 35.433 2 -0.6544924390407874 0.19828104988658632 1.0 ['NEO1|p.I1394L|1|0.19|ENSG00000067141|chr15:73301335-73301335|A/C|missense_variant'] 19887 18108 ELTLWLLK True PC9_epitope_Rep2 1014.6113681124599 1014.61026993586 74.955 2 -0.6545170531500751 0.1982934205653623 1.0 ['ENST00000566814.1_1_22:26909701-26909914:+|nuORF'] 898 16101 ADLLAVHAV True PC9_epitope_Rep2 907.51271670035 907.51160993586 67.19 2 -0.6545439319874372 0.1983027310600216 1.0 ['ENSG00000038219|ENST00000040738|BOD1L1'] 130732 8458 VSVTPKTVT True NCI_RA007_Epitope_Rep5 930.53859709502 930.53750993586 39.215 2 -0.6545518001531401 0.1983027310600216 1.0 ['nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2'] 137723 10991 YEMYVSILK True PC9_epitope_Rep4 1144.58383303528 1144.58272993586 50.052 2 -0.6546426152996806 0.19833677909093714 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 24825 12440 FAVFHPHFVL True PC9_epitope_Rep6 1212.64439957624 1212.64276490379 59.278 3 -0.6546449064142034 0.19833677909093714 1.0 ['ENSG00000147262|ENST00000682440|GPR119'] 68873 9056 LTNCLQEEKQY True H1975_Epitope_Rep1 1367.6391160652702 1367.63800993586 39.743 2 -0.6547085110527049 0.19833677909093714 1.0 ['ENSG00000134152|ENST00000256544|KATNBL1', 'chr15:34154684-34154786|142|20.16|0.51|5.31|-|ENST00000560310|KATNBL1,KATNBL1', 'ENST00000562413.2_1_6:147124063-147124576:-|nuORF', 'ENST00000540594.5_1_15:34439399-34502250:-|nuORF'] 119806 9832 VDAEDGHGP True H1975_Epitope_Rep2 895.36717466547 895.36606993586 42.804 2 -0.6547112108307095 0.19833677909093714 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 120642 5638 VEILANDQGNR True H1975_Epitope_Rep1 1227.6207635791898 1227.6196699358602 26.756 2 -0.6547240095305954 0.19834914757386407 1.0 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7'] 64386 20607 LPLPPPQLSI True PC9_epitope_Rep1 1073.6484818971699 1073.64738993586 84.081 2 -0.6547866291505519 0.1983769439644532 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 17004 12604 EGAVAVCVRVR True NCI_RA007_Epitope_Rep2 1157.63391154553 1157.63280993586 53.64 2 -0.6548491279891382 0.19838931144607125 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 94583 9147 RRSKETEVFY True H1975_Epitope_Rep1 1313.6727991520497 1313.67170993586 40.09 2 -0.6548871414626376 0.19842347206367816 1.0 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000467888.5_1_2:46525050-46574567:+|nuORF'] 12994 6795 DLLWRYYEKNR True NCI_RA007_Epitope_Rep3 1554.7943112670598 1554.7926749037902 33.834 3 -0.654897083124697 0.19842347206367816 1.0 ['ENSG00000113569|ENST00000231498|NUP155', 'nc|ENSG00000113569|O75694-2|NUP155', 'ENST00000515054.1_1_5:37301511-37303501:-|nuORF'] 121724 21684 VFLKPWIF True PC9_epitope_Rep1 1048.6109741896398 1048.6098699358602 88.235 2 -0.6549133929394213 0.19842347206367816 1.0 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 85311 11094 QERHRRPPP True H1975_Epitope_Rep2 1171.6322717527498 1171.63116993586 47.707 2 -0.6549258652860647 0.19842347206367816 1.0 ['ENST00000367033.3_1_1:208417261-208417633:-|nuORF'] 129989 24009 VRVVVLVT True NCI_RA007_Epitope_Rep3 883.5854877177899 883.58493496793 104.0 1 -0.6549364561633098 0.19842347206367816 1.0 ['ENST00000396821.7_1_22:38882394-38883916:-|nuORF'] 63418 9022 LLVPDVAK True NCI_RA007_Epitope_Rep1 853.5273041353299 853.52620993586 39.096 2 -0.6549634089759125 0.19842347206367816 1.0 ['nc|ENSG00000170476|Q8WU39-2|MZB1'] 60521 11924 LHCMWHILI True PC9_epitope_Rep4 1164.59362695668 1164.59197490379 53.65 3 -0.6549674585829608 0.19842347206367816 1.0 ['nc|ENSG00000177076|Q5QJU3-2|ACER2', 'ENSG00000177076|ENST00000340967|ACER2'] 33117 11492 GISDEYHVI True PC9_epitope_Rep4 1031.4923751785898 1031.4912699358601 51.965 2 -0.6549751240268672 0.19842347206367816 1.0 ['nc|ENSG00000105607|Q92947-2|GCDH', 'ENSG00000105607|ENST00000222214|GCDH'] 86607 13473 QLELELKQEKE True H1975_Epitope_Rep1 1385.74021000553 1385.7391099358601 56.94 2 -0.6549829933069328 0.19842347206367816 1.0 ['nc|ENSG00000018189|Q7L099-4|RUFY3', 'ENSG00000018189|ENST00000381006|RUFY3'] 18018 11967 EIEGGRRWTEL True H1975_Epitope_Rep3 1344.6786128084798 1344.6775099358601 51.189 2 -0.6550204344367564 0.19842971509663884 1.0 ['nc|ENSG00000184613|Q99435-3|NELL2'] 141642 6571 YTSETYLMKHM True NCI_RA007_Epitope_Rep2 1402.6261088534202 1402.6250099358601 30.173 2 -0.6550384492563252 0.19842971509663884 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 11311 13813 DEKEYPHRR True PC9_epitope_Rep5 1228.5948831845199 1228.59378993586 58.15 2 -0.6550385498204945 0.19842971509663884 1.0 ['ENSG00000070501|ENST00000265421|POLB'] 132343 8268 VTYSSRSYL True H1975_Epitope_Rep2 1074.53457434374 1074.53346993586 36.754 2 -0.6551459185539045 0.19844207928428198 1.0 ['B4GALNT1|p.Q231L|1|0.07|ENSG00000135454|chr12:57630172-57630172|T/A|missense_variant'] 141970 15327 YVIHTLAASL True PC9_epitope_Rep1 1086.60734536118 1086.6062499358602 63.776 2 -0.6552140844136382 0.19846680651530108 1.0 ['DMXL1|p.M2231I|1|0.11|ENSG00000172869|chr5:119175272-119175272|G/A|missense_variant'] 95210 24534 RVKKVVLVLLL True H1975_Epitope_Rep3 1278.9115132957797 1278.9104099358601 102.1 2 -0.6552188279799099 0.19846680651530108 1.0 ['ENSG00000212127|ENST00000537503|TAS2R14'] 95226 9342 RVLERKKRYHF True PC9_epitope_Rep5 1530.8895490645798 1530.88733987172 40.887 4 -0.6552570125278473 0.1984791695587124 1.0 ['PEG3|p.R392K|1|0.36|ENSG00000198300|chr19:56817267-56817267|C/T|missense_variant'] 123026 5553 VGILRRILRTL True NCI_RA007_Epitope_Rep1 1308.8717737421198 1308.8706699358602 25.67 2 -0.6553818178865275 0.1985038945014267 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 136529 15489 WWDIYYTLFEK True NCI_RA007_Epitope_Rep1 1562.7445671099797 1562.74346993586 64.331 2 -0.6554127524736115 0.1985038945014267 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 52824 6843 KPAKPLISV True PC9_epitope_Rep2 951.61170246563 951.61060993586 31.727 2 -0.655458486010827 0.198516256400765 1.0 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.I804Yfs*16|1|0.14|ENSG00000197056|chr1:35114240-35114240|A/-|frameshift_variant', 'ZMYM1|p.D473Mfs*48|1|0.09|ENSG00000197056|chr1:35113241-35113241|A/-|frameshift_variant'] 42320 10743 IDYRRWIKEKW True PC9_epitope_Rep1 1591.86233125723 1591.8606749037901 46.21 3 -0.655477048973822 0.19854404121103691 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF', 'ENST00000505457.1_1_5:6749703-6750667:+|nuORF'] 46539 8569 ITAAINKEFSN True H1975_Epitope_Rep2 1206.6244519773 1206.62334993586 37.914 2 -0.655507307274115 0.19855640210987385 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 989 5892 AEAAAVAGL True NCI_RA007_Epitope_Rep3 771.41266830591 771.41156993586 30.152 2 -0.6556780095445207 0.1986767223430343 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2', 'ENST00000372343.7_1_1:44412628-44412673:+|nuORF'] 136330 4563 WTALHHAA True PC9_epitope_Rep3 905.4507851501301 905.44968993586 22.643 2 -0.6557064767128682 0.19868601656359403 1.0 ['nc|ENSG00000089847|Q8TF21-2|ANKRD24', 'ENSG00000089847|ENST00000318934|ANKRD24', 'ANKRD24|p.G159V|1|0.57|ENSG00000089847|chr19:4207251-4207251|G/T|missense_variant'] 100856 6988 SLEQVDILWHC True H1975_Epitope_Rep1 1341.63872214245 1341.63762993586 31.916 2 -0.6557321294557792 0.19868601656359403 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 41682 5654 IAGSADSKP True NCI_RA007_Epitope_Rep2 844.42904664604 844.4279499358599 26.607 2 -0.6557982491514336 0.1987446408192221 1.0 ['ENSG00000164022|ENST00000672341|AIMP1', 'nc|ENSG00000164022|Q12904-2|AIMP1'] 119676 9036 VAVGLGGLGEP True PC9_epitope_Rep1 967.5338460677499 967.53274993586 39.607 2 -0.6558921089752069 0.198753932514959 1.0 ['ENST00000263269.3_1_19:48946008-48947172:+|nuORF'] 30523 4957 GAGLPRHHSPR True H1975_Epitope_Rep3 1183.63227175275 1183.63116993586 24.195 2 -0.6559240991995047 0.198753932514959 1.0 ['ENST00000590265.5_1_19:1242319-1244433:+|nuORF', 'ENST00000592624.1_1_19:1242319-1242811:+|nuORF'] 125961 11296 VLDIFFEVLNY True H1975_Epitope_Rep2 1370.7122043525399 1370.7111099358601 48.497 2 -0.6559830205329983 0.19877864478919285 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1', 'ENSG00000110881|ENST00000447966|ASIC1', 'nc|ENSG00000110881|P78348-1|ASIC1'] 97189 13724 SDVVSTRPRWN True NCI_RA007_Epitope_Rep2 1315.66329709751 1315.6622099358601 58.028 2 -0.6559939810903264 0.19877864478919285 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'nc|ENSG00000128159|Q96RT7-2|TUBGCP6', 'ENST00000491449.5_1_22:50658476-50664613:-|nuORF'] 82871 9009 PRTPRGGGT True PC9_epitope_Rep5 897.47806252713 897.47696993586 39.599 2 -0.6560332396869948 0.19879100035468103 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 142397 13064 YYESLNKTL True PC9_epitope_Rep4 1129.5655401188499 1129.56444993586 58.144 2 -0.6560944111853421 0.19881877621514926 1.0 ['ENSG00000138722|ENST00000264790|MMRN1'] 112559 15450 TLEFLDECI True PC9_epitope_Rep4 1081.50016298097 1081.49906993586 67.36 2 -0.6562047040752661 0.19883113078073678 1.0 ['NF1|p.E1928D|1|0.25|ENSG00000196712|chr17:31330470-31330470|A/T|missense_variant'] 65942 15650 LSDSVVYLL True NCI_RA007_Epitope_Rep4 1007.55391280599 1007.55337496793 67.974 1 -0.6562373363788363 0.19884348496530455 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 10668 11256 CPRPGGCL True PC9_epitope_Rep5 801.3625643926899 801.36146993586 48.286 2 -0.6562702018821791 0.19887125873155387 1.0 ['ENST00000519604.5_1_20:61920746-61920884:+|nuORF'] 18031 8061 EIEQGFLPK True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 35.95 2 -0.6563122511195288 0.19889289789373055 1.0 ['ENST00000503468.5_1_15:56126312-56207567:-|nuORF', 'ENSG00000069869|ENST00000435532|NEDD4', 'nc|ENSG00000069869|P46934-3|NEDD4', 'nc|ENSG00000069869|P46934-2|NEDD4', 'nc|ENSG00000069869|P46934|NEDD4'] 97824 11743 SELLPSGLWPQ True H1975_Epitope_Rep2 1225.63428838501 1225.6331899358602 50.244 2 -0.6563125024056473 0.19889289789373055 1.0 ['ENST00000320892.10_1_2:7180578-7180827:+|nuORF'] 44171 10531 IIVENFSLFY True PC9_epitope_Rep3 1243.6488758199898 1243.64722490379 45.447 3 -0.6563226804402494 0.19889289789373055 1.0 ['ENSG00000102452|ENST00000251127|NALCN', 'NALCN|p.S1455Y|1|0.32|ENSG00000102452|chr13:101068000-101068000|G/T|missense_variant'] 67426 7683 LSSPETGKYSE True H1975_Epitope_Rep1 1196.55609763396 1196.5550099358602 34.518 2 -0.6563630194557953 0.19891453505404197 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 18219 17983 EINEKSNILSN True PC9_epitope_Rep6 1259.63574493699 1259.6346499358601 81.8 2 -0.656369358304817 0.19891453505404197 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000467263.1_1_3:160130128-160131402:+|nuORF'] 86635 7492 QLFLDWYVFWK True NCI_RA007_Epitope_Rep1 1543.7863723523099 1543.78526993586 33.134 2 -0.6563769069340324 0.19891453505404197 1.0 ['ENST00000496121.5_1_21:30434776-30434839:-|nuORF'] 12937 4967 DLKRQKVI True NCI_RA007_Epitope_Rep3 998.6236641316598 998.62256993586 26.535 2 -0.6564579144390832 0.1989423047272503 1.0 ['CCDC18|p.L1097Afs*7|1|0.11|ENSG00000122483|chr1:93254563-93254564|-/GCTTTAAACACTCATAT|frameshift_variant', 'nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18'] 61754 6502 LLAFSFDP True PC9_epitope_Rep5 908.4643695255999 908.46326993586 29.982 2 -0.6564783722334416 0.1989546554834333 1.0 ['nc|ENSG00000173612|Q5T6X5-2|GPRC6A', 'nc|ENSG00000173612|Q5T6X5-3|GPRC6A', 'ENSG00000173612|ENST00000310357|GPRC6A'] 46752 10006 ITEPKGVFAK True H1975_Epitope_Rep1 1088.6229954253197 1088.62188993586 43.425 2 -0.6565320813473251 0.19896393826798847 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 18811 15806 ELDKSFRLTRF True H1975_Epitope_Rep3 1410.76194850962 1410.76084993586 66.246 2 -0.65653981575162 0.19896393826798847 1.0 ['nc|ENSG00000086475|P49903-2|SEPHS1', 'nc|ENSG00000086475|P49903-4|SEPHS1', 'ENSG00000086475|ENST00000327347|SEPHS1'] 65977 7170 LSDVTHSAV True NCI_RA007_Epitope_Rep5 927.46616043075 927.46506993586 34.254 2 -0.6565811215974867 0.19897628811939194 1.0 ['ENSG00000115977|ENST00000409085|AAK1', 'nc|ENSG00000115977|Q2M2I8-2|AAK1'] 19360 14511 ELLLFEVAWE True PC9_epitope_Rep6 1247.64379043955 1247.64268993586 67.699 2 -0.6566808477416838 0.1990256837172016 1.0 ['ENSG00000111713|ENST00000261195|GYS2'] 46609 16791 ITDELIGSIL True PC9_epitope_Rep6 1072.6015912743999 1072.6004899358602 77.09 2 -0.6567199550643875 0.1990256837172016 1.0 ['ENST00000261396.5_1_1:229577072-229577156:-|nuORF'] 109969 13445 TEIANLLKE True H1975_Epitope_Rep1 1029.57062549929 1029.57007496793 56.83 1 -0.6567274896094971 0.1990256837172016 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS', 'nc|ENSG00000170345|P01100-2|FOS'] 35338 7324 GRRWRRRRRRL True NCI_RA007_Epitope_Rep4 1623.0042935200597 1623.0026549037898 34.81 3 -0.6567368080595691 0.1990256837172016 1.0 ['ENST00000492275.5_1_21:38445580-38480706:+|nuORF', 'ENST00000355666.5_1_21:38445580-38459609:+|nuORF'] 136155 25186 WRRKALRRNPS True PC9_epitope_Rep5 1438.8381821980597 1438.8370899358601 102.02 2 -0.6568119847379197 0.19906579515323425 1.0 ['ENSG00000133980|ENST00000256362|VRTN'] 94472 24405 RRRRRPHLP True NCI_RA007_Epitope_Rep3 1242.76462333498 1242.76352993586 105.63 2 -0.6568292664205456 0.19906579515323425 1.0 ['ENST00000397558.6_2_12:120427683-120428022:+|nuORF'] 127367 25592 VMVRCLKL True PC9_epitope_Rep2 960.5612641992399 960.56071496793 104.13 1 -0.6568538468318714 0.19907507322336981 1.0 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 93190 11906 RPPLTTTATV True H1975_Epitope_Rep1 1055.5975089534702 1055.59640993586 50.797 2 -0.6568703507203351 0.19907507322336981 1.0 ['nc|ENSG00000136099|O95206-2|PCDH8', 'ENSG00000136099|ENST00000377942|PCDH8'] 36808 17811 GVLEKNVR True H1975_Epitope_Rep3 913.53451477409 913.53396496793 74.517 1 -0.6569551519178838 0.19908741964822493 1.0 ['ENSG00000143157|ENST00000367876|POGK'] 118121 13740 TYHRHMRTHE True PC9_epitope_Rep1 1366.63128577658 1366.63018993586 57.697 2 -0.6570726404380055 0.19919538812503854 1.0 ['ENSG00000180532|ENST00000318203|ZSCAN4'] 98570 9182 SFRFEVSSA True H1975_Epitope_Rep3 1028.4927095317598 1028.4916099358602 40.309 2 -0.6570787343590992 0.19919538812503854 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'nc|ENSG00000138759|Q86XX4-5|FRAS1'] 59875 8671 LGGAQEVPGL True NCI_RA007_Epitope_Rep4 939.5025459394698 939.50144993586 40.14 2 -0.6570835126646042 0.19919538812503854 1.0 ['ENST00000574343.5_1_17:79862711-79863545:-|nuORF'] 37270 12828 GVRRSFRK True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 56.426 2 -0.657114477017373 0.19919538812503854 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 99937 7531 SINLPQRI True H1975_Epitope_Rep1 939.5501648382299 939.54906993586 33.966 2 -0.6571361453010608 0.19919538812503854 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 138052 10797 YGDTLAAI True H1975_Epitope_Rep3 822.4123339527399 822.4117849679301 46.61 1 -0.6571707238695909 0.19922314533655996 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 14386 9706 DTDEDRYP True H1975_Epitope_Rep3 1009.39886871657 1009.39776993586 42.356 2 -0.657202837880015 0.19923548814698358 1.0 ['ENSG00000124391|ENST00000244241|IL17C'] 120063 7361 VDTAILEDAGA True H1975_Epitope_Rep2 1073.52406922969 1073.5229699358601 33.254 2 -0.6572344535194371 0.1992478305769201 1.0 ['ENSG00000197774|ENST00000568449|EME2', 'ENST00000570069.5_1_16:1823417-1825633:+|nuORF'] 96663 9995 SAISLWRHECI True NCI_RA007_Epitope_Rep1 1313.65504091293 1313.65394993586 42.883 2 -0.6572773035826384 0.19928792712812687 1.0 ['SPIDR|p.Q283E|1|0.09|ENSG00000164808|chr8:47407931-47407931|C/G|missense_variant'] 101928 18564 SLPWLMFF True PC9_epitope_Rep5 1039.52011057991 1039.5190099358601 76.431 2 -0.6572893869127373 0.19928792712812687 1.0 ['ENST00000463824.1_1_2:203748330-203749074:-|nuORF'] 83190 7414 PSTHLIEVRP True NCI_RA007_Epitope_Rep2 1147.6349570913499 1147.63386993586 33.464 2 -0.657311491383667 0.19929719649214742 1.0 ['POM121L12|p.W197Gfs*24|1|0.06|ENSG00000221900|chr7:53036260-53036260|T/-|frameshift_variant', 'ENSG00000221900|ENST00000408890|POM121L12'] 49119 4986 KEIQHPNVI True H1975_Epitope_Rep2 1076.59784330664 1076.59674993586 24.263 2 -0.6573269431025625 0.19929719649214742 1.0 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1', 'DAPK1|p.V1032Cfs*64|1|0.19|ENSG00000196730|chr9:87706165-87706165|G/-|frameshift_variant', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000472344.1_1_9:90113992-90254278:+|nuORF'] 47548 9086 IVTEKSTVP True H1975_Epitope_Rep3 972.54916177872 972.54806993586 39.937 2 -0.6573616828263825 0.19930339364423758 1.0 ['ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH'] 127199 20843 VLVPWEDSFLS True PC9_epitope_Rep2 1290.6496040959798 1290.6479549037902 85.618 3 -0.657365135855171 0.19930339364423758 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 55464 10068 LAGAKVER True H1975_Epitope_Rep3 842.4974009893799 842.49630993586 43.765 2 -0.6573798749125683 0.19930339364423758 1.0 ['ENSG00000110395|ENST00000264033|CBL'] 58981 16473 LEVEECRCPP True PC9_epitope_Rep2 1173.5158301284498 1173.51472993586 68.605 2 -0.6574159806838094 0.1993465563209888 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 125558 26577 VKKKARKTA True NCI_RA007_Epitope_Rep1 1028.6818477141198 1028.68127496793 110.05 1 -0.6574219485718847 0.19935889532733325 1.0 ['HIST1H1E|p.S27T|1|0.08|ENSG00000168298|chr6:26156469-26156469|T/A|missense_variant'] 57304 6045 LEAAGDKF True PC9_epitope_Rep4 849.42323298961 849.42212993586 30.243 2 -0.6574412570930036 0.19939898289412852 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 109850 5264 TEELVVNK True NCI_RA007_Epitope_Rep2 930.5022115863 930.50110993586 25.098 2 -0.6574430911251492 0.19939898289412852 1.0 ['SEMG2|p.E422Dfs*24|1|0.09|ENSG00000124157|chr20:45222897-45222898|-/TGTCTTTCTTCTGTACTTG|frameshift_variant', 'ENSG00000124157|ENST00000372769|SEMG2'] 58770 5865 LESFYEKPPP True H1975_Epitope_Rep2 1205.5968402471299 1205.59519490379 27.545 3 -0.6575202171935596 0.1994298482163495 1.0 ['ENSG00000164610|ENST00000297157|RP9', 'ENST00000474370.1_1_7:33138787-33148984:-|nuORF', 'ENST00000450133.5_1_7:32956958-32982633:-|nuORF'] 64200 10123 LPGKSLTY True PC9_epitope_Rep1 877.49091862661 877.48982993586 43.812 2 -0.6575666793325484 0.1994298482163495 1.0 ['ENST00000374232.7_1_9:115631560-115631692:+|nuORF'] 12861 6579 DLHKNEWNAYY True H1975_Epitope_Rep1 1451.6469783270302 1451.6458899358602 30.365 2 -0.6575712177920973 0.1994298482163495 1.0 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 25386 12661 FECKGQFYDYF True PC9_epitope_Rep1 1445.5961886241296 1445.5950899358602 53.57 2 -0.6575792422279092 0.1994298482163495 1.0 ['ENSG00000082497|ENST00000367012|SERTAD4'] 64834 10068 LQDFKALPP True H1975_Epitope_Rep1 1027.5702315764697 1027.56912993586 43.667 2 -0.6576502828029587 0.1994298482163495 1.0 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3'] 93653 20440 RQRPQKPAAL True NCI_RA007_Epitope_Rep5 1163.6887239997097 1163.68762993586 85.561 2 -0.6576564766383624 0.19944218441814596 1.0 ['SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 110851 16754 TGRARLGV True PC9_epitope_Rep4 828.4929843152798 828.49188993586 72.411 2 -0.6577524556597666 0.19948226447656323 1.0 ['ENST00000409806.7_2_6:149772227-149772305:-|nuORF'] 107943 16284 SVWNFLKRHK True PC9_epitope_Rep2 1313.73567419213 1313.73403490379 67.88 3 -0.6578026030926416 0.19948226447656323 1.0 ['ENSG00000034693|ENST00000367591|PEX3'] 4393 9926 AINSLYIA True H1975_Epitope_Rep1 863.47526856247 863.47416993586 43.117 2 -0.6578557764028143 0.19949459930045146 1.0 ['ZNF607|p.K428Rfs*97|1|0.38|ENSG00000198182|chr19:37698850-37698850|C/-|frameshift_variant'] 124723 10647 VHALNNVL True PC9_epitope_Rep4 878.49740098938 878.49630993586 48.704 2 -0.6579286367745664 0.1995531587057011 1.0 ['ENST00000595718.1_1_19:51013541-51014395:-|nuORF', 'nc|ENSG00000161677|Q8TAC2-2|JOSD2', 'ENSG00000161677|ENST00000598418|JOSD2'] 67678 10794 LSWEDSGLYQ True H1975_Epitope_Rep2 1196.5349682665599 1196.5338699358601 46.547 2 -0.6579771921607405 0.19956549205713317 1.0 ['nc|ENSG00000162723|Q96A28-2|SLAMF9', 'ENSG00000162723|ENST00000368093|SLAMF9'] 118862 19056 VAATISIGPS True PC9_epitope_Rep4 914.5072969667399 914.5067449679301 81.389 1 -0.6581176678734191 0.19961789720202144 1.0 ['nc|ENSG00000158711|P28324-2|ELK4', 'ENSG00000158711|ENST00000357992|ELK4'] 44124 12266 IIQQAVYPV True PC9_epitope_Rep3 1029.5858816406098 1029.58478993586 52.209 2 -0.6581201273535413 0.19961789720202144 1.0 ['ENST00000264645.11_1_17:38327543-38327843:+|nuORF'] 79804 15726 PEERRRDRRP True PC9_epitope_Rep3 1365.7337766991698 1365.73213490379 65.649 3 -0.6581340012480503 0.19961789720202144 1.0 ['nc|ENSG00000183092|Q9BUH8|BEGAIN', 'ENSG00000183092|ENST00000554140|BEGAIN'] 102090 10731 SLRGRRRPR True PC9_epitope_Rep1 1152.7064397525198 1152.7048049037899 46.164 3 -0.658171016033187 0.1996579669059871 1.0 ['ENSG00000188263|ENST00000695950|IL17REL'] 124086 20877 VGSLYLAYIL True PC9_epitope_Rep3 1110.63249747986 1110.6314099358601 85.577 2 -0.6581758550868965 0.1996579669059871 1.0 ['ENSG00000196715|ENST00000360768|VKORC1L1'] 139190 16790 YLEQLFEL True NCI_RA007_Epitope_Rep4 1053.5382627418498 1053.5371699358602 72.766 2 -0.6582034598291243 0.1996980341406298 1.0 ['ENSG00000161040|ENST00000440067|FBXL13'] 40695 3745 HRRVMILNHPD True NCI_RA007_Epitope_Rep2 1386.7302715418598 1386.72862490379 19.208 3 -0.6582035475460736 0.1996980341406298 1.0 ['ENSG00000120675|ENST00000379221|DNAJC15'] 139356 14366 YLLQLLSGF True NCI_RA007_Epitope_Rep3 1052.5906326678798 1052.5895299358601 63.819 2 -0.6582335970661469 0.1997257699240475 1.0 ['nc|ENSG00000071967|Q53TN4-3|CYBRD1', 'ENSG00000071967|ENST00000321348|CYBRD1'] 34502 3710 GPNVINHFFCD True NCI_RA007_Epitope_Rep2 1261.5549925184898 1261.55388993586 19.077 2 -0.6582550407258021 0.19973194478678827 1.0 ['ENSG00000221813|ENST00000641698|OR6B1'] 18218 7763 EINDYPQP True H1975_Epitope_Rep3 974.4345259493 974.43342993586 34.845 2 -0.6582624012828053 0.19973194478678827 1.0 ['ENST00000371130.7_2_X:123870848-123870977:-|nuORF'] 17739 4943 EHRGPVQVT True PC9_epitope_Rep4 1021.53049202281 1021.52938993586 25.616 2 -0.6582848690974115 0.19973194478678827 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 134896 3793 VYVRLRPFFR True NCI_RA007_Epitope_Rep2 1351.7877097649896 1351.78606490379 19.39 3 -0.6583308352214329 0.19975967833869948 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 59476 21648 LFQLCWEWKRR True NCI_RA007_Epitope_Rep1 1563.8132728898297 1563.81216993586 88.595 2 -0.6583732754766518 0.19978741103614012 1.0 ['ENST00000444553.5_1_13:19636745-19636844:-|nuORF'] 75440 4287 NIYRLVTK True NCI_RA007_Epitope_Rep3 1005.5971150306499 1005.59600993586 23.59 2 -0.6584867822529585 0.1998120648222318 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 64101 16089 LPDLGPIG True PC9_epitope_Rep4 780.43815477776 780.43760496793 69.822 1 -0.65855660910618 0.1998120648222318 1.0 ['ENSG00000113924|ENST00000283871|HGD', 'HGD|p.V324Gfs*3|1|0.14|ENSG00000113924|chr3:120638490-120638491|-/C|frameshift_variant'] 46489 12132 ISVMVTGGP True PC9_epitope_Rep1 859.4473395624699 859.44624993586 51.528 2 -0.6586728576876426 0.19981823503134674 1.0 ['ENST00000511979.1_1_5:138723708-138724322:-|nuORF', 'nc|ENSG00000170476|Q8WU39-3|MZB1', 'ENST00000417694.6_1_5:138723456-138724322:-|nuORF', 'ENST00000503481.5_1_5:138723456-138725442:-|nuORF', 'ENSG00000170476|ENST00000302125|MZB1'] 130455 9317 VSPALSPVRSP True H1975_Epitope_Rep1 1108.62405805448 1108.62296993586 40.744 2 -0.6587536808185165 0.19981823503134674 1.0 ['ESPN|p.K847Efs*7|1|0.25|ENSG00000187017|chr1:6460117-6460118|-/T|frameshift_variant', 'ENSG00000187017|ENST00000645284|ESPN', 'nc|ENSG00000187017|B1AK53-2|ESPN', 'ENST00000477679.1_1_1:6511829-6520203:+|nuORF'] 102670 5830 SLYKHPQHVCL True NCI_RA007_Epitope_Rep1 1323.6757763575101 1323.67466993586 26.73 2 -0.6587539290558663 0.19981823503134674 1.0 ['ENST00000281182.8_1_11:134127115-134128426:+|nuORF'] 130698 11786 VSTWNLDT True H1975_Epitope_Rep3 934.4396113297399 934.43850993586 50.481 2 -0.6587861870702411 0.1998305606900801 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 74430 19811 NETLYEINI True PC9_epitope_Rep2 1107.54480467427 1107.54427496793 81.592 1 -0.6588361743893748 0.19985521086842672 1.0 ['CERK|p.K177N|1|0.09|ENSG00000100422|chr22:46711124-46711124|C/A|missense_variant'] 11163 25831 DDLPRMRFK True PC9_epitope_Rep2 1176.60736244452 1176.60571490379 105.1 3 -0.6588404647341024 0.19985521086842672 1.0 ['ZBTB8A|p.L297*|1|0.52|ENSG00000160062|chr1:32595118-32595118|C/-|frameshift_variant', 'nc|ENSG00000160062|Q96BR9-2|ZBTB8A', 'ENSG00000160062|ENST00000373510|ZBTB8A'] 36821 9226 GVLFRQIASVL True NCI_RA007_Epitope_Rep4 1201.7182927924898 1201.71664490379 42.339 3 -0.6588675615750174 0.1998675353880751 1.0 ['nc|ENSG00000124299|P12955-3|PEPD'] 125334 15940 VIPNLIEHSTV True PC9_epitope_Rep5 1220.6764875501601 1220.67538993586 66.303 2 -0.6588827522956608 0.19987985952806359 1.0 ['ENSG00000134007|ENST00000256389|ADAM20'] 31371 12551 GDRMWQALTL True PC9_epitope_Rep1 1189.5913780272099 1189.59028993586 53.147 2 -0.6589222576431683 0.19988910451899086 1.0 ['ENSG00000047597|ENST00000378616|XK'] 141128 13743 YSSCSTIFLY True H1975_Epitope_Rep2 1182.52671208198 1182.52560993586 58.009 2 -0.6589328835921027 0.19988910451899086 1.0 ['ENST00000426799.1_1_X:65041564-65042074:-|nuORF'] 115766 13068 TSDEKGCQDV True H1975_Epitope_Rep3 1080.43935362956 1080.43824993586 55.508 2 -0.6589639254724449 0.1998983489403647 1.0 ['ENSG00000119681|ENST00000261978|LTBP2'] 52438 22375 KKRRRRRKESF True H1975_Epitope_Rep2 1545.9440442489297 1545.94240490379 92.471 3 -0.6589871606676604 0.1998983489403647 1.0 ['ENSG00000164626|ENST00000359534|KCNK5'] 129383 16922 VRDVIQRRLAR True PC9_epitope_Rep5 1380.84259887216 1380.84094490379 70.107 3 -0.6591487733984628 0.19991991498667816 1.0 ['ENST00000590669.5_1_19:10362732-10362900:+|nuORF', 'ENST00000592514.5_3_19:10362578-10362897:+|nuORF'] 117198 7175 TVLHQALSKSQ True NCI_RA007_Epitope_Rep1 1210.6669854956199 1210.6653449037901 31.898 3 -0.6591937068230908 0.19991991498667816 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 137393 6086 YDYFQIKMQNY True H1975_Epitope_Rep2 1511.67550157399 1511.67440993586 28.385 2 -0.6591963557312895 0.19991991498667816 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9', 'SAMD9|p.T529Hfs*5|1|0.05|ENSG00000205413|chr7:93104516-93104516|G/-|frameshift_variant'] 20422 12113 EPELCQKLP True PC9_epitope_Rep6 1055.53213181559 1055.53102993586 57.934 2 -0.6592508184504068 0.19997843898231996 1.0 ['ENSG00000164342|ENST00000296795|TLR3'] 127871 19904 VPGAWVVG True PC9_epitope_Rep2 783.4279244472299 783.4273749679301 81.957 1 -0.6592662727428661 0.19999075970615865 1.0 ['ENST00000532654.5_1_11:78775723-78781043:-|nuORF'] 80139 13938 PFQHHRHQI True PC9_epitope_Rep1 1198.61080803218 1198.60915490379 58.448 3 -0.6592981500169365 0.20002463926574987 1.0 ['ENST00000454520.6_1_12:50384572-50385828:-|nuORF'] 71943 10376 MERKDFETWL True PC9_epitope_Rep5 1353.6387221424498 1353.6370649037901 44.896 3 -0.6593128900075076 0.20002463926574987 1.0 ['nc|ENSG00000119402|Q9UKT8-2|FBXW2', 'ENSG00000119402|ENST00000608872|FBXW2'] 138795 221 YIVGWRTGLCE True NCI_RA007_Epitope_Rep3 1295.63324283919 1295.63158490379 1.2648 3 -0.6593205090601559 0.20002463926574987 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 97687 10357 SEIDLLDIRTE True H1975_Epitope_Rep3 1302.6667107121 1302.6656099358602 44.893 2 -0.6593363323675573 0.20002463926574987 1.0 ['ENSG00000138772|ENST00000264908|ANXA3', 'ENST00000505805.1_1_4:79518453-79531266:+|nuORF'] 116031 21765 TSMLPGFLHRL True PC9_epitope_Rep5 1270.68561276522 1270.6845099358602 88.748 2 -0.6594081767363418 0.20005235763343496 1.0 ['ENSG00000131966|ENST00000254286|ACTR10'] 129487 24925 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 108.45 2 -0.6595019814660248 0.20009239297813367 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 82801 23763 PRRKQRMKIMK True PC9_epitope_Rep4 1470.8751619537395 1470.87352490379 99.784 3 -0.6595040159026179 0.20009239297813367 1.0 ['ENST00000339526.8_1_1:182359866-182360031:-|nuORF'] 136453 18756 WVEGFIVL True PC9_epitope_Rep5 961.5273041353299 961.52620993586 77.157 2 -0.6595136626781056 0.20011394607578953 1.0 ['ENST00000360004.5_2_6:32557567-32557600:-|nuORF'] 65704 12856 LSATNANVIA True PC9_epitope_Rep3 972.52400966004 972.52290993586 54.469 2 -0.6595287972442074 0.20011394607578953 1.0 ['PLA1A|p.R110S|1|0.2|ENSG00000144837|chr3:119608822-119608822|C/A|missense_variant'] 57715 13316 LEELEEEF True PC9_epitope_Rep5 1036.4600719907999 1036.45896993586 56.232 2 -0.659530113003497 0.20011394607578953 1.0 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1'] 135288 10437 WFTMSFSYY True H1975_Epitope_Rep2 1230.50558271458 1230.5044899358602 45.161 2 -0.6595371940517731 0.20012626262626262 1.0 ['nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 113394 10190 TLSCSEEGLPG True PC9_epitope_Rep5 1091.48049016555 1091.4793899358601 44.183 2 -0.6595769041625166 0.20013857879744398 1.0 ['HK3|p.G465Efs*5|1|0.41|ENSG00000160883|chr5:176887657-176887657|C/-|frameshift_variant', 'ENSG00000160883|ENST00000292432|HK3'] 130462 11196 VSPAVGNQVD True PC9_epitope_Rep3 984.4876241513199 984.48652993586 48.07 2 -0.6596071220349808 0.20015089458935115 1.0 ['ENST00000403096.7_1_2:3653453-3653594:+|nuORF'] 42819 9868 IEPQGNNVL True PC9_epitope_Rep5 982.5083595959 982.50726993586 42.927 2 -0.6597097793809515 0.20017552503541294 1.0 ['FLNC|p.T291N|1|0.22|ENSG00000128591|chr7:128837658-128837658|C/A|missense_variant'] 129772 25271 VRRGKKRVK True PC9_epitope_Rep3 1125.75707834305 1125.75657496793 102.61 1 -0.6597334661734282 0.20017552503541294 1.0 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 73813 19310 NAIYYYADQIY True PC9_epitope_Rep4 1395.6346823078297 1395.63358993586 82.383 2 -0.6597617681704364 0.20020015396458815 1.0 ['ENSG00000142583|ENST00000377424|SLC2A5'] 138738 9406 YIRKLLLQLL True NCI_RA007_Epitope_Rep3 1271.8329286219098 1271.83237496793 44.086 1 -0.659766612912556 0.20020015396458815 1.0 ['ENST00000475034.1_1_3:76360291-76360369:+|nuORF'] 89127 17269 QVQQLKDQV True PC9_epitope_Rep4 1084.58767254576 1084.58656993586 74.43 2 -0.6598270548409003 0.20021246786038707 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 62701 20754 LLLLSPNPFL True NCI_RA007_Epitope_Rep5 1125.67978202545 1125.6781349037901 86.804 3 -0.6598539633244932 0.20021861625150106 1.0 ['ENST00000602596.1_1_16:67515375-67518232:+|nuORF'] 42938 6968 IESDSPDKYK True NCI_RA007_Epitope_Rep2 1180.5611830144 1180.56008993586 31.725 2 -0.6598539758529739 0.20021861625150106 1.0 ['ENSG00000154783|ENST00000285046|FGD5'] 113445 10244 TLSPYPVI True NCI_RA007_Epitope_Rep4 888.4956696538799 888.49456993586 46.258 2 -0.659859819614056 0.20021861625150106 1.0 ['ENSG00000161714|ENST00000619929|PLCD3'] 132318 9959 VTYGHMPV True PC9_epitope_Rep1 902.4320238514999 902.43092993586 43.17 2 -0.659926313860962 0.20024632437841583 1.0 ['ENSG00000196357|ENST00000304116|ZNF565', 'nc|ENSG00000196357|Q8N9K5|ZNF565'] 66201 5318 LSESQEENK True NCI_RA007_Epitope_Rep4 1062.4829326937 1062.48182993586 27.017 2 -0.6599731504235201 0.20027403165219534 1.0 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.D923N|1|0.07|ENSG00000164171|chr5:53075246-53075246|G/A|missense_variant'] 72085 11496 MEWCIWLMY True NCI_RA007_Epitope_Rep5 1273.53339476889 1273.53175490379 50.87 3 -0.6599873015072232 0.20028325995258475 1.0 ['ENST00000446859.5_1_3:169514113-169514143:-|nuORF'] 106995 5570 SVETEKLLKY True NCI_RA007_Epitope_Rep5 1208.6652541601197 1208.66414993586 28.11 2 -0.6600055106154329 0.20028325995258475 1.0 ['nc|ENSG00000116747|P10155-3|RO60', 'nc|ENSG00000116747|P10155-5|RO60', 'nc|ENSG00000116747|P10155-4|RO60', 'ENSG00000116747|ENST00000400968|RO60'] 79780 21208 PEDLASKIL True PC9_epitope_Rep5 984.54916177872 984.54806993586 86.625 2 -0.660019418210812 0.20029557105251006 1.0 ['ENST00000479016.2_1_12:56618280-56618448:+|nuORF'] 10226 26449 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 110.01 1 -0.6600596342045019 0.200332502078138 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 100354 11416 SKREPENEL True PC9_epitope_Rep1 1100.5462016566 1100.5451099358602 48.789 2 -0.6600600128539673 0.200332502078138 1.0 ['nc|ENSG00000115970|Q6YHU6-6|THADA', 'nc|ENSG00000115970|Q6YHU6-5|THADA', 'nc|ENSG00000115970|Q6YHU6-3|THADA', 'ENSG00000115970|ENST00000405975|THADA', 'ENST00000408045.7_1_2:43571220-43805671:-|nuORF', 'nc|ENSG00000115970|Q6YHU6-2|THADA'] 16888 17724 EFKNFFYI True PC9_epitope_Rep3 1106.5436824754597 1106.5425899358602 73.372 2 -0.6600806349094528 0.200332502078138 1.0 ['ENSG00000141429|ENST00000269195|GALNT1'] 6222 18938 APPLPLALG True PC9_epitope_Rep1 847.51673945163 847.51564993586 77.629 2 -0.6601126208327993 0.20034172772612524 1.0 ['ENST00000476276.5_1_16:2892353-2892452:-|nuORF'] 10227 26515 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 110.35 1 -0.6601174034028793 0.20034172772612524 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 139836 6626 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.3921149679301 30.898 1 -0.660229903527667 0.20047718002001078 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 125245 5411 VIKTRWKIL True NCI_RA007_Epitope_Rep4 1155.7491989979499 1155.74755490379 27.384 3 -0.6602428053898991 0.20048948680848444 1.0 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 116854 20703 TVETLEKENP True PC9_epitope_Rep3 1158.5768330785397 1158.5757299358602 84.909 2 -0.6603311215229107 0.20049562098847143 1.0 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF'] 17652 9292 EHKITQNWR True PC9_epitope_Rep2 1210.6207040095398 1210.6190549037901 41.082 3 -0.6603482805885542 0.20049562098847143 1.0 ['ENST00000600110.1_1_19:23779328-23779892:+|nuORF'] 41917 14162 IDAVDTLNA True PC9_epitope_Rep3 930.46582607758 930.4652749679301 59.56 1 -0.6603573273922781 0.20049562098847143 1.0 ['nc|ENSG00000183814|Q5TKA1-2|LIN9', 'nc|ENSG00000183814|Q5TKA1-3|LIN9', 'ENSG00000183814|ENST00000681046|LIN9'] 816 6616 ACDCRHAP True H1975_Epitope_Rep2 871.34289157727 871.34178993586 30.356 2 -0.6603869030919326 0.20050792673541634 1.0 ['chr12:121993709-121999716|266|30.82|0.37|6.38|+|0|TE_info:SVA_F,SVA_F_dup702,SVA,Retroposon,donor,+,121993006,121993709|None,CFAP251|2'] 68930 4483 LTPCHGAL True PC9_epitope_Rep6 810.4058091036599 810.40470993586 24.445 2 -0.660435480966332 0.20052023210355388 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 58385 21349 LENLVYYN True PC9_epitope_Rep1 1026.5022115863 1026.50110993586 86.95 2 -0.6604467146755935 0.20052945069490405 1.0 ['ENST00000472895.5_1_3:49898454-49899024:-|nuORF', 'ENST00000475665.5_1_3:49898454-49899827:-|nuORF', 'nc|ENSG00000164076|Q8NCB2-3|CAMKV', 'nc|ENSG00000164076|Q8NCB2-2|CAMKV', 'ENSG00000164076|ENST00000477224|CAMKV'] 116642 6357 TVARRWKPP True H1975_Epitope_Rep3 1109.6457965585698 1109.64468993586 29.445 2 -0.6604835940084228 0.20052945069490405 1.0 ['ENST00000354300.4_1_12:110971622-110971877:-|nuORF'] 128455 9752 VPSEGVQI True PC9_epitope_Rep2 827.43888305375 827.43778993586 42.849 2 -0.6605184862518761 0.2005478861751081 1.0 ['ENST00000589827.5_1_17:75138810-75139725:+|nuORF'] 15915 7030 EDLHRWNQKRY True NCI_RA007_Epitope_Rep5 1543.7644081211101 1543.7627549037902 33.719 3 -0.6605391885280855 0.2005478861751081 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF', 'nc|ENSG00000113391|Q8WUF8-4|ARB2A', 'nc|ENSG00000113391|Q8WUF8-3|ARB2A', 'ENSG00000113391|ENST00000395965|FAM172A', 'ENST00000504768.2_1_5:93246475-93410459:-|nuORF'] 133577 17700 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 77.607 3 -0.6605495690093635 0.2005478861751081 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 75291 20158 NIITGNFLM True PC9_epitope_Rep4 1021.52665251233 1021.52554993586 85.674 2 -0.6605546159906411 0.2005478861751081 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 59771 15798 LGEFVDDYTV True PC9_epitope_Rep5 1156.5288202569598 1156.5277299358602 65.755 2 -0.6605806978654524 0.20055401662049863 1.0 ['ENSG00000115233|ENST00000409682|PSMD14'] 67514 14569 LSTHRLIWRDQ True PC9_epitope_Rep1 1423.76843087239 1423.76677490379 60.864 3 -0.6605878077604833 0.20055401662049863 1.0 ['ENST00000475375.1_1_13:53010343-53024741:-|nuORF', 'ENSG00000136100|ENST00000378060|VPS36'] 84351 19715 PYWKKRFLHMK True PC9_epitope_Rep1 1532.8438447421197 1532.84218490379 80.659 3 -0.6606024363642237 0.20055401662049863 1.0 ['ENST00000476943.1_1_13:49956911-49975339:-|nuORF'] 3103 8533 AGAESLLHQA True PC9_epitope_Rep1 995.50360856863 995.50250993586 37.659 2 -0.6606312950784701 0.2005693621604986 1.0 ['ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 11139 3711 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 18.775 2 -0.6606433385037304 0.2005693621604986 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 91953 23708 RKNRRRRLGFN True PC9_epitope_Rep4 1471.8708793086696 1471.86922490379 99.55 3 -0.6606453122069911 0.2005693621604986 1.0 ['ENST00000398645.6_1_11:66887311-66947572:+|nuORF'] 102673 7337 SLYLHNWKS True NCI_RA007_Epitope_Rep2 1146.5821932425 1146.58108993586 33.162 2 -0.6606533507309751 0.2005693621604986 1.0 ['ENST00000482945.5_1_15:58889748-58902828:-|nuORF'] 59224 8463 LFELYFSPFS True H1975_Epitope_Rep1 1248.60667665484 1248.60556993586 37.482 2 -0.6606590350597004 0.2005693621604986 1.0 ['ENST00000415251.6_1_7:77531138-77531189:+|nuORF'] 126639 10207 VLNFLKDHF True NCI_RA007_Epitope_Rep3 1131.6076797143498 1131.60604490379 47.232 3 -0.6607642654534562 0.2006124396023759 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'ENST00000561252.1_1_15:90768241-90768761:+|nuORF', 'ENST00000560993.1_1_15:90767112-90768514:+|nuORF'] 112128 22485 TIYDILFT True PC9_epitope_Rep3 984.51679902128 984.51570993586 91.763 2 -0.6607992319789299 0.20062474033268193 1.0 ['ENST00000520678.1_1_8:43037358-43049067:+|nuORF'] 70344 6865 LVSMLGCLP True NCI_RA007_Epitope_Rep1 931.4870961994699 931.48598993586 30.707 2 -0.6608429141751228 0.20063704068443405 1.0 ['ENST00000374512.7_2_6:33381598-33383628:+|nuORF'] 102610 19878 SLWIRFGYDP True PC9_epitope_Rep2 1252.6240580544797 1252.62296993586 81.854 2 -0.6608937763666205 0.20065855272268468 1.0 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5'] 67728 17224 LSWYHGAI True PC9_epitope_Rep1 945.47085188837 945.46974993586 71.071 2 -0.6608983876871136 0.20065855272268468 1.0 ['ENST00000558685.1_1_15:45464079-45464229:-|nuORF'] 27771 12798 FPWAMQQQL True PC9_epitope_Rep3 1147.54845058607 1147.5473499358602 54.248 2 -0.6609500482645281 0.20065855272268468 1.0 ['ENST00000409185.5_1_2:131810576-131840200:-|nuORF'] 35985 10105 GTVKELPKGP True PC9_epitope_Rep3 1024.5916952970397 1024.5905899358602 43.821 2 -0.6610023723042027 0.20068315049313004 1.0 ['ENSG00000157637|ENST00000374759|SLC38A10'] 109120 3985 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 20.397 2 -0.6610141370751278 0.20068315049313004 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 60086 8271 LGLRANKTSP True H1975_Epitope_Rep3 1055.6087423435101 1055.60764993586 36.796 2 -0.6610315003255594 0.20069544881065945 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3'] 66533 14641 LSHSDAYVI True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 64.246 2 -0.6610775013423712 0.20070774674974998 1.0 ['ENSG00000221838|ENST00000359593|AP4M1'] 123932 23239 VGRTRFLRA True PC9_epitope_Rep3 1074.6410455312998 1074.6399499358602 94.663 2 -0.6611070300010455 0.20071067083019276 1.0 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 96911 7423 SAVIDEFVGD True NCI_RA007_Epitope_Rep3 1050.48695544498 1050.4858499358602 36.324 2 -0.6612224556599785 0.20071067083019276 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 7827 4665 ASVNLDIAK True NCI_RA007_Epitope_Rep5 929.51819600361 929.51708993586 24.628 2 -0.661244344695588 0.20071067083019276 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.S1011Vfs*17|1|0.44|ENSG00000143341|chr1:185987523-185987524|-/C|frameshift_variant', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 81817 12440 PLPQTPEA True PC9_epitope_Rep1 851.4388830537499 851.43778993586 52.716 2 -0.6612483811545564 0.20071067083019276 1.0 ['PAPLN|p.Q542Rfs*260|1|0.13|ENSG00000100767|chr14:73255011-73255011|C/-|frameshift_variant'] 92534 25595 RMGPPVGG True H1975_Epitope_Rep1 769.3904933926899 769.3899449679301 106.1 1 -0.6612722160416888 0.20071067083019276 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 11138 3643 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 18.439 2 -0.6612851607832646 0.20071067083019276 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 44016 7249 IIHQIGAK True NCI_RA007_Epitope_Rep1 878.5337864981 878.53268993586 32.188 2 -0.6613151789711433 0.20071067083019276 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 113454 12758 TLSRERPLP True PC9_epitope_Rep1 1067.60874234351 1067.60764993586 53.947 2 -0.6613252989152345 0.20071067083019276 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19757012-19757291:-|nuORF'] 80833 5098 PHPSPPTPDS True NCI_RA007_Epitope_Rep1 1030.47197408718 1030.47086993586 23.915 2 -0.6613314077009754 0.20071067083019276 1.0 ['nc|ENSG00000165699|Q92574-2|TSC1', 'ENSG00000165699|ENST00000298552|TSC1'] 85522 15294 QGAGSVLF True PC9_epitope_Rep4 777.40210362221 777.40100993586 66.759 2 -0.6613375240308502 0.20071067083019276 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 66387 7454 LSGHTDGTIV True PC9_epitope_Rep2 998.5032742154599 998.50216993586 34.046 2 -0.6613380835539864 0.20071067083019276 1.0 ['IFT172|p.A172T|1|0.13|ENSG00000138002|chr2:27483345-27483345|C/T|missense_variant'] 107613 3823 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 19.804 2 -0.6613543454825731 0.20071067083019276 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 46566 18094 ITAHHTEVLP True PC9_epitope_Rep1 1116.5927579262 1116.5916699358602 74.392 2 -0.6613698053838644 0.20071067083019276 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 70652 26193 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 106.8 3 -0.6614000053985667 0.20071067083019276 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 80723 21018 PHATLVFDVEL True PC9_epitope_Rep1 1239.6499384491499 1239.6488499358602 85.674 2 -0.6614278634775844 0.2007198781744628 1.0 ['ENST00000474726.5_1_20:1352758-1358098:-|nuORF', 'ENSG00000198225|ENST00000370659|FKBP1C', 'ENSG00000088832|ENST00000400137|FKBP1A', 'chr20:1370072-1371120|444|30.76|0.0|21.55|-|ENST00000677335|FKBP1A,FKBP1A'] 56045 18176 LASSVSRPLSL True PC9_epitope_Rep1 1128.65027280232 1128.64861490379 74.704 3 -0.6614429093151647 0.2007198781744628 1.0 ['ENST00000585058.1_1_17:29850443-29850833:+|nuORF'] 11462 3608 DFDVTYRNTPH True NCI_RA007_Epitope_Rep2 1363.6156781987502 1363.61458993586 18.685 2 -0.6614781618372338 0.20072908495224032 1.0 ['ENST00000358517.6_1_6:151164249-151164378:+|nuORF'] 56569 7246 LDGSRLIK True PC9_epitope_Rep2 900.5392658013599 900.53816993586 33.26 2 -0.6614902940137382 0.20072908495224032 1.0 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 92764 14787 RPADVIFAT True PC9_epitope_Rep1 988.5341804209199 988.5336349679301 61.697 1 -0.6615351363259488 0.20073829116357764 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 17955 9210 EICVNNTP True PC9_epitope_Rep4 888.40111764604 888.40002993586 43.025 2 -0.6615578154284177 0.20073829116357764 1.0 ['ENST00000336139.8_1_11:123597023-123597197:-|nuORF'] 119107 18784 VAGSRARL True PC9_epitope_Rep3 828.49298431528 828.49188993586 77.473 2 -0.6616026746508907 0.200747496808527 1.0 ['ENST00000423007.5_1_9:134378335-134378638:+|nuORF'] 133576 19652 VWVWVCLRRRL True NCI_RA007_Epitope_Rep2 1484.8550781321599 1484.85343490379 81.39 3 -0.6616200373182103 0.200747496808527 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 63122 15937 LLRFYDGICKW True PC9_epitope_Rep5 1412.7274775771998 1412.7258449037902 66.292 3 -0.6616610498865036 0.20075978959672705 1.0 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 129201 16533 VQSTSQLSI True PC9_epitope_Rep3 961.5080252427299 961.5074749679301 68.732 1 -0.6617303102024147 0.20080284224611267 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 107615 4473 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 22.325 2 -0.6618361384562289 0.20081198289914803 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 142421 8006 YYFCRWYRNRK True NCI_RA007_Epitope_Rep2 1653.7986854548496 1653.79702490379 35.771 3 -0.6618530778542867 0.20081198289914803 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 127267 15469 VLYRTTLP True PC9_epitope_Rep6 961.5596668927699 961.55856993586 71.671 2 -0.6618553846164561 0.20081198289914803 1.0 ['nc|ENSG00000170266|P16278-3|GLB1', 'nc|ENSG00000170266|P16278|GLB1', 'ENSG00000170266|ENST00000307363|GLB1', 'nc|ENSG00000170266|P16278-2|GLB1'] 123648 11936 VGQKRWYRG True NCI_RA007_Epitope_Rep3 1148.6203100867199 1148.6186549037902 54.077 3 -0.6618605699501086 0.20081198289914803 1.0 ['ENST00000309575.4_1_3:142838724-142839039:+|nuORF'] 59956 8960 LGGVIAAR True PC9_epitope_Rep1 755.46537258511 755.46426993586 39.308 2 -0.6618616100858261 0.20081198289914803 1.0 ['ENSG00000180425|ENST00000623205|C11orf71'] 57365 4050 LEAIVCIK True NCI_RA007_Epitope_Rep5 887.51502519947 887.51392993586 22.016 2 -0.6618738970263529 0.20081198289914803 1.0 ['nc|ENSG00000156471|P48651-3|PTDSS1', 'nc|ENSG00000156471|P48651-2|PTDSS1', 'ENSG00000156471|ENST00000517309|PTDSS1'] 113159 10488 TLPPPHNHTL True PC9_epitope_Rep3 1125.5930922793702 1125.59143490379 45.281 3 -0.6618767880646502 0.20081198289914803 1.0 ['TENM2|p.P251T|1|0.65|ENSG00000145934|chr5:167952626-167952626|C/A|missense_variant'] 60072 16557 LGLKAELG True PC9_epitope_Rep1 799.4803539429099 799.47980496793 68.509 1 -0.6619334110175386 0.20081500845763495 1.0 ['ENST00000417753.5_1_3:48557182-48594149:-|nuORF'] 11137 3576 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 18.099 2 -0.661934623804222 0.20081500845763495 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 63223 10517 LLSFPFLFLP True NCI_RA007_Epitope_Rep2 1192.68961843316 1192.68852993586 45.505 2 -0.6619543682688306 0.20081500845763495 1.0 ['ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 19403 19511 ELLWPLFLFFI True PC9_epitope_Rep4 1436.8107961949997 1436.8096899358602 83.169 2 -0.6619564043616977 0.20081500845763495 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF'] 26104 9762 FGQNFYLK True H1975_Epitope_Rep1 1015.5127167003499 1015.51160993586 42.479 2 -0.6619668980032277 0.2008272977503037 1.0 ['ENSG00000178338|ENST00000322434|ZNF354B'] 110377 21915 TEVEVESFDVP True H1975_Epitope_Rep2 1249.57141334493 1249.57030993586 90.616 2 -0.6620094970587911 0.20083649839312348 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.N1652Tfs*30|1|0.17|ENSG00000214814|chr8:124101166-124101166|C/-|frameshift_variant', 'FER1L6|p.R1073Gfs*13|1|0.1|ENSG00000214814|chr8:124061918-124061918|G/-|frameshift_variant', 'FER1L6|p.P815Hfs*14|1|0.15|ENSG00000214814|chr8:124035429-124035429|C/-|frameshift_variant', 'FER1L6|p.L572Ffs*4|1|0.26|ENSG00000214814|chr8:124010605-124010606|-/T|frameshift_variant'] 72149 19194 MFVFKERWFWR True PC9_epitope_Rep3 1630.8231092975398 1630.82200993586 79.047 2 -0.6620283418766483 0.20083649839312348 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 112680 12466 TLGCCICFFIM True H1975_Epitope_Rep1 1249.53676589717 1249.5356699358601 52.988 2 -0.6621014222400089 0.2008487867884491 1.0 ['nc|ENSG00000165970|Q9Y345-2|SLC6A5', 'nc|ENSG00000165970|Q9Y345-3|SLC6A5', 'ENSG00000165970|ENST00000525748|SLC6A5'] 65827 7209 LSDLASVDYDP True H1975_Epitope_Rep2 1193.54519859709 1193.54356490379 32.664 3 -0.6621684955450884 0.2008640969264595 1.0 ['ENST00000443361.1_1_9:108285096-108287232:+|nuORF', 'ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1'] 84799 5245 QDYMFETL True PC9_epitope_Rep5 1045.44264810485 1045.4415499358602 25.192 2 -0.6621891935851311 0.2008640969264595 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 30932 9773 GARDTNVLL True PC9_epitope_Rep6 957.5243440132099 957.52324993586 48.034 2 -0.662210226251707 0.2008640969264595 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'NEK10|p.S486Kfs*7|1|0.12|ENSG00000163491|chr3:27291504-27291505|-/AGTGGAGCTTT|frameshift_variant', 'nc|ENSG00000163491|Q6ZWH5-4|NEK10', 'nc|ENSG00000163491|Q6ZWH5-2|NEK10'] 112954 20373 TLLLREQAL True PC9_epitope_Rep5 1055.63389446219 1055.63278993586 83.399 2 -0.6622275015011753 0.2008640969264595 1.0 ['HOXC12|p.R271T|1|0.04|ENSG00000123407|chr12:53956529-53956529|G/C|missense_variant'] 44611 17604 ILQYNKLLE True PC9_epitope_Rep5 1132.6492101731599 1132.64810993586 72.723 2 -0.6622331785275407 0.2008640969264595 1.0 ['nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1', 'nc|ENSG00000085978|Q676U5-3|ATG16L1', 'ENST00000479942.5_1_2:234160473-234198706:+|nuORF', 'ENST00000485623.5_1_2:234160473-234172712:+|nuORF', 'ENST00000474148.5_1_2:234160473-234181699:+|nuORF'] 92536 25898 RMGPPVGG True H1975_Epitope_Rep2 769.3904933926899 769.3899449679301 106.35 1 -0.662250380796283 0.20090404514075738 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 27767 10403 FPVLFPFN True H1975_Epitope_Rep3 979.51673945163 979.51564993586 45.072 2 -0.6622905069958636 0.20090404514075738 1.0 ['ENSG00000167306|ENST00000285039|MYO5B', 'nc|ENSG00000167306|Q9ULV0-2|MYO5B', 'nc|ENSG00000167306|Q9ULV0-3|MYO5B'] 99917 14539 SIMYFEPAP True PC9_epitope_Rep2 1053.4841189940098 1053.48302993586 61.195 2 -0.6623578716700542 0.20091015312711397 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 16693 5492 EERQQWESRER True H1975_Epitope_Rep1 1531.7127664710695 1531.71166993586 26.186 2 -0.6623581616356444 0.20091015312711397 1.0 ['ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 92422 23247 RLRAPAEIRV True PC9_epitope_Rep1 1179.72002412799 1179.71836490379 94.207 3 -0.6623949031766168 0.20091015312711397 1.0 ['PXDN|p.N750Tfs*115|1|0.06|ENSG00000130508|chr2:1649527-1649531|CAGGT/-|frameshift_variant'] 137819 7691 YEQVDLVGK True H1975_Epitope_Rep1 1049.5393253710097 1049.53822993586 34.549 2 -0.6624083885273782 0.2009162605500638 1.0 ['ENSG00000107625|ENST00000373585|DDX50'] 110894 12523 TGTPMFPV True PC9_epitope_Rep3 848.4102257777598 848.40912993586 53.194 2 -0.6624409908305888 0.2009162605500638 1.0 ['ENST00000607710.1_1_8:123792649-123793066:-|nuORF'] 1641 8642 AEFSLHCETNL True PC9_epitope_Rep5 1262.5601374685798 1262.55904993586 38.184 2 -0.6624414173817244 0.2009162605500638 1.0 ['ENSG00000139318|ENST00000279488|DUSP6'] 127431 24242 VNGCSTPAC True PC9_epitope_Rep2 850.33132383406 850.33022993586 98.787 2 -0.6625303684467028 0.20092854507440658 1.0 ['chr3:98867438-98881540|151|18.55|0.23|6.34|-|1|TE_info:L1PA5,L1PA5_dup2059,L1,LINE,acceptor,-,98865721,98867438|None,DCBLD2|22'] 110813 9502 TGLSEKHP True PC9_epitope_Rep3 867.4450310633499 867.44392993586 41.498 2 -0.6625560680995338 0.20094082922104875 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1'] 111769 12947 TIIYNGTLV True PC9_epitope_Rep5 992.5542471591599 992.55314993586 54.811 2 -0.6625737577040459 0.20095311299000768 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 70224 8850 LVQPHKAP True PC9_epitope_Rep6 888.5181364339599 888.51702993586 43.974 2 -0.6626525686801 0.2009807689351432 1.0 ['ENST00000421887.2_1_5:174948933-174952897:+|nuORF'] 21608 19459 ERRFSFQKKKK True PC9_epitope_Rep3 1480.8626656103995 1480.8615699358602 80.077 2 -0.6626742914191615 0.20098996203095937 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'ENST00000595214.2_1_19:15547509-15549737:-|nuORF'] 29103 9610 FTKRLVKVT True H1975_Epitope_Rep1 1090.6862643882198 1090.6851699358601 41.89 2 -0.662692043560739 0.20098996203095937 1.0 ['ENSG00000168496|ENST00000305885|FEN1', 'nc|ENSG00000168496|P39748-2|FEN1'] 102367 4665 SLTCFQWLLQR True NCI_RA007_Epitope_Rep5 1393.71764116949 1393.71598490379 24.628 3 -0.6627067937214719 0.20099915456152487 1.0 ['ENST00000436764.5_1_20:37049499-37050843:-|nuORF'] 107610 11329 SVPNWRSKERA True NCI_RA007_Epitope_Rep3 1328.69493157896 1328.69382993586 51.676 2 -0.6627217039867583 0.20099915456152487 1.0 ['ENST00000359901.8_1_2:98128184-98128274:-|nuORF'] 129011 20544 VQLLRPLSRVD True NCI_RA007_Epitope_Rep2 1294.7721192704998 1294.77046490379 84.983 3 -0.6627664868107911 0.20102680767338907 1.0 ['CHPF|p.E495D|1|0.15|ENSG00000123989|chr2:219540226-219540226|C/A|missense_variant'] 135549 23866 WKRKEDKKRVV True PC9_epitope_Rep1 1470.87831567454 1470.87667490379 96.602 3 -0.6628382249966369 0.20103290859066386 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 59442 11477 LFPAPTAL True PC9_epitope_Rep5 828.47454028648 828.47344993586 49.143 2 -0.6628485453512707 0.20103290859066386 1.0 ['ENST00000462385.1_1_2:220427921-220430090:-|nuORF'] 55982 13082 LASDRGEAVI True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 55.344 2 -0.6628631490290939 0.20103290859066386 1.0 ['ENSG00000163328|ENST00000392552|GPR155'] 13699 6844 DPSTFLRMWGP True H1975_Epitope_Rep2 1305.6175927750498 1305.61648993586 31.241 2 -0.6629150905911113 0.20105437890012604 1.0 ['ENST00000394224.3_1_11:65407601-65408454:+|nuORF'] 20547 10618 EPRLTLGL True NCI_RA007_Epitope_Rep5 897.5283667644899 897.52726993586 47.481 2 -0.6629240474031538 0.20105437890012604 1.0 ['nc|ENSG00000285253|Q6N043-4|ZNF280D'] 81471 8350 PLGDNTGAL True PC9_epitope_Rep1 856.42904664604 856.4279499358599 36.952 2 -0.6629577059953411 0.20105437890012604 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3'] 25762 8927 FETFYQRFRHF True PC9_epitope_Rep1 1576.75753183552 1576.75588490379 39.18 3 -0.6630186843708932 0.20110967662609122 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 28942 11665 FTDPRAYLKY True H1975_Epitope_Rep3 1272.6502728023197 1272.64861490379 50.004 3 -0.6630231643002771 0.20110967662609122 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4'] 33939 5655 GLRYWYRRLPG True PC9_epitope_Rep6 1435.7836870137098 1435.78204490379 29.855 3 -0.6630540141753087 0.2011373242142473 1.0 ['ENST00000441576.6_2_3:49054739-49054894:-|nuORF', 'ENST00000498794.1_1_3:49054739-49054862:-|nuORF'] 11433 7004 DEWRLLSP True H1975_Epitope_Rep2 1014.5134449763399 1014.51234993586 31.864 2 -0.6630990613201122 0.20114960194264286 1.0 ['nc|ENSG00000125846|P52736-2|ZNF133', 'ENSG00000125846|ENST00000425686|ZNF133', 'nc|ENSG00000125846|P52736-5|ZNF133', 'ENST00000402618.6_1_20:18269192-18290832:+|nuORF'] 70125 11954 LVPKHKKKIQP True PC9_epitope_Rep2 1314.84997566838 1314.84832490379 51.303 3 -0.6631046582288048 0.20116187929365115 1.0 ['ENSG00000178804|ENST00000324382|H1-8'] 41641 10130 IAEPFYHLP True H1975_Epitope_Rep2 1085.55458151233 1085.5534899358602 43.964 2 -0.6631812863322433 0.2012171694662589 1.0 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.E1332Gfs*3|1|0.12|ENSG00000163939|chr3:52563374-52563375|-/C|frameshift_variant'] 12531 7086 DKKKPSPPAP True NCI_RA007_Epitope_Rep3 1063.6025943339098 1063.6014899358602 34.989 2 -0.6632043161694511 0.2012171694662589 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 123931 23565 VGRTRFLRA True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 95.433 2 -0.663212138464958 0.2012294452128477 1.0 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 116971 14607 TVGLIFVVP True PC9_epitope_Rep3 943.5742543277499 943.57314993586 61.317 2 -0.6632291260179943 0.20124172058213335 1.0 ['nc|ENSG00000220721|Q8NHA8|OR1F12P'] 12629 5534 DLARAQAV True NCI_RA007_Epitope_Rep4 842.4610154806599 842.45990993586 27.881 2 -0.6633288230053436 0.20130618517095658 1.0 ['SAFB2-LONP1|1|fusion', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5696605-5708411:-|nuORF', 'LONP1|p.E488Q|1|0.13|ENSG00000196365|chr19:5700833-5700833|C/G|missense_variant', 'nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'LONP1|p.M552Hfs*3|1|0.14|ENSG00000196365|chr19:5699059-5699060|-/C|frameshift_variant'] 5922 5306 APGQTLAPR True PC9_epitope_Rep3 909.5032146458099 909.50210993586 25.486 2 -0.6633339231761247 0.20130618517095658 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF', 'ENST00000545024.1_5:69806308-69808341:+|nuORF'] 74018 6357 NDEKERSM[Oxidation]S True H1975_Epitope_Rep3 1110.46115208374 1110.46004993586 29.445 2 -0.6633415359418976 0.20130618517095658 1.0 ['ENST00000522841.6_1_16:21481075-21531198:-|nuORF'] 13405 16188 DLYRLWRSRPW True PC9_epitope_Rep3 1546.8157154179798 1546.8140549037903 67.405 3 -0.6633486355227995 0.20130618517095658 1.0 ['nc|ENSG00000102539|O43193-2|MLNR', 'ENSG00000102539|ENST00000218721|MLNR'] 113246 10227 TLRAESINERT True NCI_RA007_Epitope_Rep1 1288.67352742804 1288.67242993586 43.792 2 -0.663356295081592 0.20131536487545523 1.0 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant'] 71646 10559 MDYDSYQHYFY True H1975_Epitope_Rep1 1530.5761814555403 1530.57454490379 45.567 3 -0.6633621185658548 0.20131536487545523 1.0 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL', 'nc|ENSG00000116990|P12524-2|MYCL'] 108942 4843 TADTTTHVTP True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 23.717 2 -0.6633871786908594 0.20133990995559242 1.0 ['nc|ENSG00000182871|P39060|COL18A1', 'nc|ENSG00000182871|P39060-1|COL18A1'] 3059 10282 AFTKENLRAPG True PC9_epitope_Rep1 1202.64077074778 1202.6396699358602 44.435 2 -0.6634419719912382 0.20133990995559242 1.0 ['CON__ENSEMBL:ENSBTAP00000031900'] 26734 22099 FIYYQSFQKH True PC9_epitope_Rep5 1359.66117183919 1359.66006993586 90.036 2 -0.66346357236785 0.20134908805949508 1.0 ['ZNF14|p.H273Lfs*53|1|0.1|ENSG00000105708|chr19:19712460-19712463|GTGT/-|frameshift_variant', 'ENSG00000105708|ENST00000344099|ZNF14'] 135346 7767 WGLWRRREL True NCI_RA007_Epitope_Rep5 1270.7047084170197 1270.70305490379 36.572 3 -0.6634697828324627 0.20134908805949508 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 80297 7145 PGFEDHLK True NCI_RA007_Epitope_Rep3 941.4606811274899 941.45958993586 35.224 2 -0.6635229538117432 0.20141663081556144 1.0 ['DCSTAMP|p.V336D|1|0.21|ENSG00000164935|chr8:104349559-104349559|T/A|missense_variant'] 84776 7231 QDVEKELRDGG True NCI_RA007_Epitope_Rep5 1244.5996937814398 1244.5985899358602 34.492 2 -0.6635315662977848 0.20141663081556144 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 32535 25741 GGGGGCCCG True H1975_Epitope_Rep1 669.16690136125 669.16635496793 106.75 1 -0.6635542714906904 0.20141663081556144 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 98475 8841 SFIGNTGP True PC9_epitope_Rep1 791.38136817763 791.38026993586 38.849 2 -0.663565011958726 0.20142890066835675 1.0 ['ENSG00000116918|ENST00000366639|TSNAX'] 123957 5663 VGRWERQR True NCI_RA007_Epitope_Rep4 1085.5842589311699 1085.58316993586 28.389 2 -0.6636142303459477 0.20144117014411703 1.0 ['ENST00000558610.5_1_15:40698281-40698377:+|nuORF'] 130292 8581 VSHEHKER True PC9_epitope_Rep6 1020.5100909313999 1020.50898993586 42.796 2 -0.6636312571128439 0.20145343924285955 1.0 ['FAM9C|p.E30K|1|0.09|ENSG00000187268|chrX:13043222-13043222|C/T|missense_variant'] 38440 4380 HENNNGQAAF True NCI_RA007_Epitope_Rep3 1100.4635346618 1100.4624299358602 24.002 2 -0.6636518979859353 0.20145951759102781 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 137531 8273 YEEHLQAKK True H1975_Epitope_Rep3 1144.58767254576 1144.58656993586 36.803 2 -0.6636678213374347 0.20145951759102781 1.0 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF'] 133574 21584 VWVWVCLRRRL True H1975_Epitope_Rep2 1484.8550781321599 1484.85343490379 89.301 3 -0.663684736510215 0.20145951759102781 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 60029 12302 LGKNEAIGRVA True PC9_epitope_Rep2 1126.64585612822 1126.64474993586 52.631 2 -0.663760055985752 0.20151168328391686 1.0 ['nc|ENSG00000129990|O00445-2|SYT5', 'ENSG00000129990|ENST00000354308|SYT5'] 11698 10298 DGYFGGARV True NCI_RA007_Epitope_Rep5 940.4402800360798 940.43918993586 46.243 2 -0.6637901623838471 0.20151168328391686 1.0 ['ENSG00000044446|ENST00000379942|PHKA2', 'PHKA2|p.Q1025Pfs*38|1|0.65|ENSG00000044446|chrX:18899215-18899216|-/A|frameshift_variant', 'nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 59921 12465 LGGPAASLSP True PC9_epitope_Rep1 868.46543215476 868.46432993586 52.812 2 -0.6638091066366356 0.20151168328391686 1.0 ['ENSG00000165684|ENST00000684778|SNAPC4'] 44419 19882 ILGPPPPSF True PC9_epitope_Rep2 923.51165407119 923.51054993586 81.869 2 -0.663830871192605 0.20152394998002887 1.0 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF', 'ENST00000511978.5_1_5:138651425-138655027:+|nuORF', 'ENST00000509918.5_1_5:138651425-138657594:+|nuORF'] 131988 10875 VTSLIPAT True PC9_epitope_Rep5 800.4643695256 800.46326993586 46.819 2 -0.6639680986885617 0.20159766495122514 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF', 'ENST00000545024.1_5:69806308-69808341:+|nuORF'] 16046 9264 EDWERLSL True PC9_epitope_Rep2 1046.50327421546 1046.5021699358601 40.971 2 -0.6640042761162299 0.20160683288016346 1.0 ['ENST00000446527.5_1_1:101542987-101549071:+|nuORF'] 130688 18689 VSTRWEIIAE True PC9_epitope_Rep4 1202.6295373577398 1202.62844993586 79.967 2 -0.6640663862862911 0.20160683288016346 1.0 ['ENSG00000178913|ENST00000313368|TAF7'] 57296 5317 LEAAGDKF True NCI_RA007_Epitope_Rep5 849.42323298961 849.42212993586 27.145 2 -0.6641874255776482 0.20167744512204488 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 67396 9248 LSSNTLRAL True PC9_epitope_Rep6 973.5556441414899 973.55454993586 45.724 2 -0.664194419229052 0.20167744512204488 1.0 ['ENSG00000176020|ENST00000320431|AMIGO3'] 82845 27687 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 113.52 3 -0.6642121403493274 0.20168970814132103 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 67089 6892 LSQFFLCLP True NCI_RA007_Epitope_Rep4 1066.55213898418 1066.5510499358602 33.128 2 -0.6642777066135235 0.2017326922781524 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 70661 25254 LWHIWRERN True PC9_epitope_Rep4 1308.68397297244 1308.68233490379 105.92 3 -0.6643779710601775 0.20176031458326932 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 34520 9434 GPQFLGGA True H1975_Epitope_Rep1 745.3758888743698 745.37534496793 41.203 1 -0.664411990368603 0.2017725757645577 1.0 ['ENST00000328554.8_1_22:19839984-19842309:-|nuORF'] 113757 20187 TMGRPLGQPTC True PC9_epitope_Rep5 1159.5477989630697 1159.54615490379 82.698 3 -0.6644700060364369 0.2017848365691816 1.0 ['ENST00000314134.3_1_11:45827124-45827283:+|nuORF'] 15553 6188 EAPTQSPGTSP True H1975_Epitope_Rep3 1070.48801807414 1070.4869299358602 28.815 2 -0.6645225917091722 0.20181851692572342 1.0 ['nc|ENSG00000174038|Q5VYM1-3|SPATA31G1', 'nc|ENSG00000174038|Q5VYM1-2|SPATA31G1', 'ENSG00000174038|ENST00000312292|C9orf131'] 45090 22696 IPKTWYSAEQF True PC9_epitope_Rep1 1368.67140216972 1368.6703099358601 92.105 2 -0.6645522427651244 0.20181851692572342 1.0 ['ENSG00000116031|ENST00000410009|CD207'] 18700 11883 ELAKSLKVDP True H1975_Epitope_Rep3 1098.62847472858 1098.62736993586 50.858 2 -0.6646007085962466 0.20181851692572342 1.0 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 58431 22968 LEPELRRRGWR True NCI_RA007_Epitope_Rep1 1466.82186342758 1466.8207699358602 94.33 2 -0.664617066381982 0.20181851692572342 1.0 ['ENST00000298894.4_1_14:93650993-93651212:-|nuORF', 'ENST00000556883.1_1_14:93650993-93651212:-|nuORF'] 117573 13328 TVSLVTTSL True H1975_Epitope_Rep3 919.5226126777101 919.5220649679301 56.526 1 -0.6646301967030221 0.20182767624020886 1.0 ['ENSG00000173285|ENST00000641535|OR10K1'] 113513 15500 TLTGNLGMII True PC9_epitope_Rep1 1031.5685173243098 1031.56740993586 64.443 2 -0.6646662902694321 0.20182767624020886 1.0 ['ENSG00000197786|ENST00000357377|OR5B17'] 133589 21190 VWVWVCLRRRL True PC9_epitope_Rep6 1484.8550781321599 1484.85343490379 94.356 3 -0.6646911215010592 0.20183683499201377 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 101567 22771 SLLLGEKTI True PC9_epitope_Rep1 972.58554728744 972.58444993586 92.397 2 -0.664691244913708 0.20183683499201377 1.0 ['HDX|p.G279Efs*38|1|0.08|ENSG00000165259|chrX:84468887-84468887|C/-|frameshift_variant', 'ENST00000472135.2_1_X:83695455-83724556:-|nuORF', 'nc|ENSG00000165259|Q7Z353-2|HDX', 'ENSG00000165259|ENST00000373177|HDX'] 371 13950 AAKVKCIP True PC9_epitope_Rep6 828.4891448047998 828.48804993586 65.511 2 -0.6647179440994184 0.2018428933425478 1.0 ['ENSG00000111652|ENST00000543155|COPS7A'] 66505 8517 LSHHQKRPG True PC9_epitope_Rep3 1058.5733598943 1058.57226993586 37.718 2 -0.6647328353123196 0.2018428933425478 1.0 ['ENST00000569914.5_1_16:67144038-67154090:+|nuORF'] 3056 6940 AFSRAHRIGQA True NCI_RA007_Epitope_Rep5 1212.64758746372 1212.64648993586 33.379 2 -0.664767069537924 0.2018428933425478 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 110676 4879 TGAMENWGL True NCI_RA007_Epitope_Rep5 977.4276667470499 977.42656993586 25.461 2 -0.6647678580635159 0.20185515080778918 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 126416 2777 VLKKKKKKKK True PC9_epitope_Rep4 1254.92274668582 1254.9211049037901 15.964 3 -0.6648025124044071 0.20186430787186338 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 79374 20494 PASLISIIQ True PC9_epitope_Rep4 940.5593325396001 940.55822993586 86.979 2 -0.6648399739517717 0.20186430787186338 1.0 ['TBL1XR1|p.A48S|1|0.39|ENSG00000177565|chr3:177053835-177053835|C/A|missense_variant'] 121105 14702 VERHLPVIKL True PC9_epitope_Rep4 1202.7499272739399 1202.7482849037901 64.486 3 -0.664858000569663 0.20189192094473196 1.0 ['ENST00000358598.6_1_17:66527053-66527110:+|nuORF'] 61093 15257 LIHWPMGFKP True PC9_epitope_Rep1 1224.6477707045199 1224.6461249037902 63.506 3 -0.6648748320790596 0.2019010764576711 1.0 ['nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2', 'nc|ENSG00000165568|Q96JD6-5|AKR1E2', 'nc|ENSG00000165568|Q96JD6-3|AKR1E2', 'nc|ENSG00000165568|Q96JD6-2|AKR1E2'] 46131 16539 ISKETPAPV True PC9_epitope_Rep2 940.5229470308799 940.52184993586 68.856 2 -0.6648767464067429 0.2019010764576711 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 112047 7874 TISTEKPSI True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 35.655 2 -0.6649429295360182 0.2019440434876079 1.0 ['ZAN|p.E2695Rfs*83|1|0.75|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant', 'ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.A2019Pfs*35|1|0.1|ENSG00000146839|chr7:100775692-100775692|C/-|frameshift_variant', 'ZAN|p.Q2488Rfs*12|1|0.3|ENSG00000146839|chr7:100791044-100791044|C/-|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 135289 10349 WFTMSFSYY True H1975_Epitope_Rep3 1230.50558271458 1230.5044899358602 44.861 2 -0.664965153762225 0.2019562980820908 1.0 ['nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 84778 10307 QDVEKELRDGG True PC9_epitope_Rep5 1244.5996937814398 1244.5985899358602 44.633 2 -0.6649798323712865 0.20196855230022726 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 136681 20657 WWWKLHFVWER True PC9_epitope_Rep3 1671.84628727027 1671.8451899358602 84.729 2 -0.6651121709912929 0.2020084144581273 1.0 ['ENSG00000168282|ENST00000305386|MGAT2'] 66535 7932 LSHSPLPAHLQ True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64474993586 38.31 2 -0.6651125894953303 0.2020084144581273 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'ENST00000609762.1_1_7:138978594-138982579:+|nuORF'] 64693 7256 LPVRTTNKISK True NCI_RA007_Epitope_Rep3 1255.7612202336297 1255.76012993586 35.652 2 -0.6651867337373784 0.20203602192638997 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9', 'nc|ENSG00000185453|Q86XI8|ZSWIM9'] 79696 15241 PDSGHVRLRL True NCI_RA007_Epitope_Rep2 1148.64143945412 1148.64034993586 63.978 2 -0.6652261360104779 0.20206036785703319 1.0 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 127360 12592 VMTLRSRL True NCI_RA007_Epitope_Rep2 974.56952038382 974.56842993586 53.593 2 -0.6652414423394744 0.20206036785703319 1.0 ['ENSG00000105717|ENST00000251203|PBX4', 'ENST00000558222.1_1_19:19675736-19681567:-|nuORF', 'ENST00000557978.6_1_19:19680348-19681054:-|nuORF'] 56382 14128 LDDSALYLSDK True PC9_epitope_Rep5 1238.60304782638 1238.6019499358601 59.354 2 -0.6652735616191896 0.20206036785703319 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 131326 15947 VTGLFHNPSI True PC9_epitope_Rep4 1083.5712942056302 1083.57018993586 69.267 2 -0.6652940633022456 0.20206036785703319 1.0 ['ADAMTS12|p.L695Wfs*10|1|0.13|ENSG00000151388|chr5:33624291-33624291|G/-|frameshift_variant', 'ADAMTS12|p.G1085Efs*13|1|0.4|ENSG00000151388|chr5:33576772-33576772|C/-|frameshift_variant', 'nc|ENSG00000151388|P58397-3|ADAMTS12', 'ADAMTS12|p.A1476Pfs*77|1|0.08|ENSG00000151388|chr5:33546079-33546079|C/-|frameshift_variant', 'ENSG00000151388|ENST00000504830|ADAMTS12', 'ADAMTS12|p.S327Ifs*68|1|0.07|ENSG00000151388|chr5:33661976-33661976|C/-|frameshift_variant', 'ADAMTS12|p.E406Kfs*25|1|0.08|ENSG00000151388|chr5:33649676-33649676|C/-|frameshift_variant', 'ADAMTS12|p.I291Nfs*30|1|0.2|ENSG00000151388|chr5:33683061-33683062|-/T|frameshift_variant'] 93835 14011 RRCLRRWFHFW True H1975_Epitope_Rep3 1661.86262312409 1661.86152993586 59.214 2 -0.6653242589121036 0.20206036785703319 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4'] 39591 8508 HLKKHVVP True NCI_RA007_Epitope_Rep3 956.5919700805599 956.59086993586 40.54 2 -0.6653434742102854 0.20206036785703319 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'RNF213|p.A949Rfs*39|1|0.23|ENSG00000173821|chr17:80317221-80317221|G/-|frameshift_variant', 'nc|ENSG00000173821|Q63HN8-5|RNF213'] 138580 6927 YIDHDISM True NCI_RA007_Epitope_Rep1 992.4273323938801 992.42622993586 30.949 2 -0.6653697470744147 0.20206036785703319 1.0 ['ENSG00000182950|ENST00000332145|ODF3L1'] 128804 13700 VQAEYWHDPIK True NCI_RA007_Epitope_Rep2 1384.6775501793197 1384.67644993586 57.934 2 -0.6654539157585215 0.2021186765947647 1.0 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 120453 11600 VEEREPEN True H1975_Epitope_Rep2 1000.4461532621599 1000.44504993586 49.686 2 -0.6655111396068806 0.20217698354212724 1.0 ['ENSG00000184361|ENST00000331780|SPATA32'] 57645 13452 LEEELDLLL True PC9_epitope_Rep3 1085.58560685709 1085.58450993586 56.788 2 -0.6655684028687967 0.2022352886992032 1.0 ['ENSG00000169857|ENST00000306730|AVEN'] 120590 14603 VEHFSQEEL True PC9_epitope_Rep4 1116.50875351872 1116.5076499358602 64.098 2 -0.66557140395304 0.20224132637396378 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 125879 19479 VLAPSRQALPR True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.7180349037899 81.812 3 -0.6656091701630673 0.20224132637396378 1.0 ['ENST00000263851.8_2_8:79717625-79717664:-|nuORF'] 75388 8028 NITKSVAV True PC9_epitope_Rep3 830.4861675993399 830.48506993586 35.855 2 -0.6656209675524666 0.20224132637396378 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 110381 9301 TEVIISLAR True H1975_Epitope_Rep1 1000.5916952970399 1000.59058993586 40.684 2 -0.6656279696570067 0.20225357301852903 1.0 ['nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1', 'ENST00000555945.1_1_14:45431624-45465140:+|nuORF'] 830 15395 ACRALMIAS True PC9_epitope_Rep1 934.47284311766 934.47174993586 64.035 2 -0.6656388245886264 0.20225960948053542 1.0 ['CLDN11|p.A88S|1|0.1|ENSG00000013297|chr3:170423198-170423198|G/T|missense_variant'] 35740 17650 GTHALAHP True H1975_Epitope_Rep2 802.4085859849799 802.40748993586 73.211 2 -0.6656618410334691 0.20225960948053542 1.0 ['ENST00000505551.5_1_4:1838279-1843155:-|nuORF'] 131836 6154 VTQRRHQP True H1975_Epitope_Rep3 1020.5577098301599 1020.55660993586 28.684 2 -0.6656957371612092 0.20225960948053542 1.0 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'SVIL|p.E1347Sfs*19|1|0.18|ENSG00000197321|chr10:29491001-29491001|G/-|frameshift_variant'] 137008 16898 YAKYRYRRPYP True PC9_epitope_Rep1 1531.8048163811097 1531.80370993586 69.823 2 -0.6657561073940145 0.20230255583697904 1.0 ['ENSG00000170915|ENST00000442253|PAQR8'] 140476 19916 YRIREFRQTFR True PC9_epitope_Rep3 1570.84807817542 1570.84642490379 81.848 3 -0.6657936651143136 0.20233015073834157 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 38116 16228 HCAEDDSI True PC9_epitope_Rep5 888.3283466286 888.32724993586 67.41 2 -0.66583409308388 0.20234239489155295 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 63371 8310 LLVATHAL True H1975_Epitope_Rep1 836.5119884243601 836.51088993586 36.896 2 -0.66586946692045 0.20234842670759784 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 4423 2710 AIQNHLQRQIR True PC9_epitope_Rep1 1375.77966426243 1375.77802490379 14.842 3 -0.6658767162332315 0.20234842670759784 1.0 ['ENSG00000185477|ENST00000609438|GPRIN3'] 12179 19814 DIEWRCCQGY True H1975_Epitope_Rep3 1271.5063280739098 1271.5052299358601 82.956 2 -0.6658780930787972 0.20234842670759784 1.0 ['EMILIN1|p.M116I|1|0.14|ENSG00000138080|chr2:27080789-27080789|G/A|missense_variant'] 17202 6220 EGTPLKQAPE True NCI_RA007_Epitope_Rep1 1068.54513902744 1068.5440499358601 28.23 2 -0.6659724168884652 0.20236066982855214 1.0 ['ENST00000304834.11_1_17:73143658-73143733:-|nuORF'] 38692 5597 HGATVLTALG True PC9_epitope_Rep4 938.5185303567799 938.51742993586 28.314 2 -0.6660390694360027 0.20236980645557381 1.0 ['ENSG00000198125|ENST00000397326|MB'] 71110 7093 LYLLHYFQNIL True PC9_epitope_Rep1 1435.7863723523099 1435.78471490379 32.092 3 -0.6660746587469895 0.20236980645557381 1.0 ['nc|ENSG00000171931|Q5XX13-3|FBXW10', 'nc|ENSG00000171931|Q5XX13-4|FBXW10', 'ENSG00000171931|ENST00000395665|FBXW10', 'nc|ENSG00000171931|Q5XX13-2|FBXW10', 'FBXW10|p.K880Tfs*7|1|0.12|ENSG00000171931|chr17:18778776-18778777|GA/-|frameshift_variant', 'ENSG00000241322|ENST00000395906|FBXW10B'] 88822 17319 QTYYLKISLEV True PC9_epitope_Rep4 1355.73366807311 1355.73256993586 74.625 2 -0.6660993507595052 0.20238204868465481 1.0 ['ENST00000247815.8_1_12:66717785-66717878:+|nuORF'] 48460 9504 KAAQVTAG True PC9_epitope_Rep3 744.4130026590799 744.4124549679301 41.505 1 -0.6661181287871664 0.20239429053794797 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 104435 12118 SQLKHLRIYN True NCI_RA007_Epitope_Rep2 1270.7146043943799 1270.7135099358602 51.731 2 -0.6661620155302288 0.20240342557207974 1.0 ['ZNF461|p.H267Y|1|0.13|ENSG00000197808|chr19:36639546-36639546|G/A|missense_variant'] 49178 5774 KEMEFLDIT True H1975_Epitope_Rep2 1124.5423621461198 1124.54126993586 27.205 2 -0.6661759556814671 0.20240342557207974 1.0 ['ENST00000558588.5_1_15:40583969-40599873:-|nuORF', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2'] 118460 14938 TYPKIWVKV True PC9_epitope_Rep2 1132.66446631448 1132.66282490379 62.718 3 -0.6662550596421731 0.20242790711950767 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 128428 17224 VPRRDFEMQEK True H1975_Epitope_Rep3 1433.7085330377697 1433.70742993586 71.894 2 -0.6662751942422745 0.20242790711950767 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'ENST00000565339.5_1_16:67848301-67859829:+|nuORF', 'ENST00000487120.5_1_16:67848301-67859829:+|nuORF', 'ENST00000466164.5_1_16:67840937-67859829:+|nuORF'] 56153 19489 LAVPQHRVR True NCI_RA007_Epitope_Rep1 1074.6410455313 1074.6399499358602 79.967 2 -0.666354965906927 0.20243082730997652 1.0 ['ENSG00000275183|ENST00000611161|LENG9', 'nc|ENSG00000275183|Q96B70|LENG9'] 80345 17033 PGGHSCLV True H1975_Epitope_Rep2 768.35885891124 768.35776993586 70.774 2 -0.6663588899824389 0.20243082730997652 1.0 ['ENST00000460804.5_1_1:21048287-21050865:-|nuORF', 'nc|ENSG00000189410|Q6ZV89-2|SH2D5', 'ENSG00000189410|ENST00000444387|SH2D5'] 118906 11789 VADLAHVLSL True PC9_epitope_Rep1 1036.59169529704 1036.5905899358602 50.217 2 -0.6663852344657806 0.20243082730997652 1.0 ['ENSG00000078589|ENST00000171757|P2RY10'] 102667 19667 SLYKAAGV True PC9_epitope_Rep4 807.4490538146298 807.44794993586 83.767 2 -0.6663886975523332 0.20243082730997652 1.0 ['ENST00000261489.6_2_13:45010747-45010900:-|nuORF'] 23310 11251 EVQLRRPNWSK True H1975_Epitope_Rep3 1411.76843087239 1411.76732993586 48.379 2 -0.6665256167170963 0.20247065142331006 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 78099 26584 NVYVQYQSE True PC9_epitope_Rep5 1128.5087535187201 1128.50710490379 108.31 3 -0.6665620837320003 0.20247065142331006 1.0 ['ENSG00000169249|ENST00000307771|ZRSR2', 'nc|ENSG00000212643|Q15695|ZRSR2P1'] 65472 23685 LRKRLAPLV True NCI_RA007_Epitope_Rep4 1064.71823322284 1064.7171299358602 102.72 2 -0.6665773016220192 0.20247648566124007 1.0 ['nc|ENSG00000172728|Q6P4F1-6|FUT10', 'ENSG00000172728|ENST00000327671|FUT10', 'nc|ENSG00000172728|Q6P4F1-2|FUT10', 'nc|ENSG00000172728|Q6P4F1-3|FUT10', 'nc|ENSG00000172728|Q6P4F1-4|FUT10', 'nc|ENSG00000172728|Q6P4F1-5|FUT10', 'ENST00000520767.5_1_8:33246435-33318970:-|nuORF'] 48823 9669 KDSIQLSL True PC9_epitope_Rep3 902.50729696674 902.50618993586 42.142 2 -0.6665901254529332 0.20247648566124007 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 20607 7887 EPTFRVMQQK True NCI_RA007_Epitope_Rep2 1262.6441418760598 1262.64250490379 35.31 3 -0.6665907426635131 0.20247648566124007 1.0 ['nc|ENSG00000138311|Q70YC5-4|ZNF365'] 66585 19338 LSINFAKVL True PC9_epitope_Rep1 1003.6066170851899 1003.60552993586 79.19 2 -0.6666110488472652 0.20247648566124007 1.0 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF'] 83588 10239 PVATVKYT True PC9_epitope_Rep3 877.4909186266099 877.48982993586 44.334 2 -0.6666208117803563 0.20247648566124007 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 107451 19460 SVLTKPACI True PC9_epitope_Rep1 930.5208388558999 930.51974993586 79.669 2 -0.6666235469852049 0.20247648566124007 1.0 ['ENST00000533409.1_1_11:59951353-59951413:-|nuORF'] 82847 27875 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 114.55 3 -0.6666294397395375 0.20247648566124007 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 82028 13933 PLVSRGAASL True PC9_epitope_Rep1 969.5607295219299 969.55962993586 58.428 2 -0.6666598722903873 0.20247648566124007 1.0 ['RELB|p.R81P|1|0.3|ENSG00000104856|chr19:45012014-45012014|G/C|missense_variant'] 10277 23533 CCESSCCC True NCI_RA007_Epitope_Rep3 836.16313850376 836.16202993586 102.1 2 -0.6667662836948801 0.2025469888761028 1.0 ['ENSG00000241241|ENST00000440582|KRTAP4-16'] 84032 11895 PVVADYKYDL True PC9_epitope_Rep6 1181.5968402471299 1181.59519490379 56.986 3 -0.6667850807132494 0.2025469888761028 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 75646 21808 NLERGYRMVRP True H1975_Epitope_Rep2 1389.72993718869 1389.7288299358602 90.192 2 -0.6668418513254002 0.20260214492842568 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'ENST00000469765.5_1_1:32745435-32751314:+|nuORF'] 131338 20858 VTGLYDIFFLY True H1975_Epitope_Rep1 1349.69074063197 1349.6896499358602 86.673 2 -0.6668448703087861 0.20260214492842568 1.0 ['ENST00000263694.8_1_1:31732485-31732845:-|nuORF'] 83156 4825 PSSAQAAVI True PC9_epitope_Rep4 842.4497820906199 842.44868993586 25.14 2 -0.6668947292854752 0.20262972168523122 1.0 ['ENST00000533443.5_3_11:44960744-44968624:-|nuORF'] 1493 5821 AEELKFKWEN True NCI_RA007_Epitope_Rep1 1292.6401020414398 1292.63845490379 26.697 3 -0.66696330451839 0.20267263996072354 1.0 ['nc|ENSG00000197057|Q6ZMT9-2|DTHD1', 'nc|ENSG00000197057|Q6ZMT9|DTHD1', 'ENSG00000197057|ENST00000639862|DTHD1'] 135747 16285 WLWWQPWWWWK True PC9_epitope_Rep6 1786.85612367798 1786.85502993586 75.0 2 -0.6669722670175804 0.20270021478981282 1.0 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 41380 16961 HYDISFLRL True PC9_epitope_Rep4 1162.61349337078 1162.6118549037901 73.232 3 -0.6670525725436132 0.20278293420063515 1.0 ['PCYOX1L|p.G138D|1|0.83|ENSG00000145882|chr5:149364153-149364153|G/A|missense_variant'] 55179 9557 LAARQVPV True PC9_epitope_Rep1 852.5181364339599 852.51702993586 41.619 2 -0.6671035050378227 0.20278293420063515 1.0 ['ENST00000533614.5_1_1:249151936-249153183:-|nuORF', 'ENST00000496411.5_1_1:249152123-249153213:-|nuORF', 'ENST00000483791.6_1_1:249152025-249153300:-|nuORF', 'ENST00000470787.6_1_1:249150751-249153213:-|nuORF', 'ENST00000412341.6_1_1:249150017-249153213:-|nuORF'] 55870 13597 LAPVATSLSP True PC9_epitope_Rep2 954.53859709502 954.53750993586 57.59 2 -0.6671088783936269 0.20278293420063515 1.0 ['ENST00000566056.1_1_16:30959736-30965162:+|nuORF', 'ENSG00000175938|ENST00000318663|ORAI3'] 17156 7685 EGQALQEPW True H1975_Epitope_Rep2 1056.48762415132 1056.48652993586 34.512 2 -0.6671469858219927 0.2027951644575356 1.0 ['ENSG00000074771|ENST00000159060|NOX3', 'NOX3|p.G368V|1|0.22|ENSG00000074771|chr6:155428836-155428836|C/A|missense_variant'] 92537 26363 RMGPPVGG True H1975_Epitope_Rep2 769.3904933926899 769.3899449679301 108.48 1 -0.6672492620595328 0.2028380762445348 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 84797 8815 QDYLLLINCQ True H1975_Epitope_Rep1 1221.60635938501 1221.6052699358602 38.829 2 -0.6673847760630822 0.2028503052802749 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 91324 10337 RGRQAQSA True NCI_RA007_Epitope_Rep3 872.4576614357198 872.45656993586 47.725 2 -0.6675083917678719 0.20285319834330418 1.0 ['ENST00000591295.5_1_17:42271068-42271269:-|nuORF'] 32320 20045 GFESLSQYG True PC9_epitope_Rep3 986.4345259493 986.43342993586 82.352 2 -0.6675118085254949 0.20285319834330418 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 100700 10280 SLDQLVQK True H1975_Epitope_Rep1 929.5181960036099 929.51708993586 44.487 2 -0.6675169943640937 0.20285319834330418 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 107759 9753 SVSRSEIAL True PC9_epitope_Rep6 960.5240096600398 960.52290993586 47.944 2 -0.6675171248432261 0.20285319834330418 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 15918 6646 EDLKYLPMLQE True H1975_Epitope_Rep1 1377.6850036285298 1377.6833549037901 30.617 3 -0.6675348658032814 0.20286231439440422 1.0 ['ENST00000465204.5_1_2:48035118-48035199:-|nuORF'] 1049 7609 AEAEQEKDQLR True NCI_RA007_Epitope_Rep1 1315.6368075661499 1315.6351649037902 33.589 3 -0.6675375521060619 0.20286231439440422 1.0 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 89303 1719 QWEKLYTWH True PC9_epitope_Rep5 1289.6193070272097 1289.61766490379 9.5167 3 -0.6675646037163944 0.20287142988618584 1.0 ['ENSG00000083093|ENST00000261584|PALB2'] 30870 5509 GAPPQNSLDAP True NCI_RA007_Epitope_Rep4 1065.50908787189 1065.50798993586 27.782 2 -0.6676223311995635 0.20287142988618584 1.0 ['ENST00000465160.2_1_9:140286885-140287641:-|nuORF'] 3366 5432 AGHAVAGAALQ True NCI_RA007_Epitope_Rep3 964.50902830224 964.50792993586 28.378 2 -0.6676354891574814 0.20288365672214126 1.0 ['ENST00000571080.1_1_17:881865-882622:-|nuORF'] 91722 18701 RKDKKKLRRLL True H1975_Epitope_Rep2 1452.9728847657198 1452.97123490379 77.632 3 -0.6676620771854312 0.20290499708580018 1.0 ['ENSG00000196284|ENST00000371459|SUPT3H', 'nc|ENSG00000196284|O75486-4|SUPT3H'] 17013 4699 EGDGWLKSFQR True NCI_RA007_Epitope_Rep2 1321.64149902377 1321.6398449037902 22.905 3 -0.6677426569342801 0.20290499708580018 1.0 ['nc|ENSG00000230223|P0DMR3|ATXN8OS'] 5867 19396 APGALLLE True PC9_epitope_Rep4 782.4538048419 782.45270993586 82.717 2 -0.6677443628634561 0.20290499708580018 1.0 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant'] 43453 6183 IGGSIKTVP True H1975_Epitope_Rep3 870.51746772762 870.51636993586 28.795 2 -0.6678311455370021 0.2029478979738953 1.0 ['ENSG00000088812|ENST00000262919|ATRN'] 62352 15555 LLGLKKLSFYY True NCI_RA007_Epitope_Rep3 1343.78530972315 1343.7842099358602 68.751 2 -0.6679182595540692 0.2029876842379718 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 52775 10349 KNKIWVNEFRY True H1975_Epitope_Rep1 1495.7935829910698 1495.79194490379 44.755 3 -0.6679369657321964 0.2029876842379718 1.0 ['ENSG00000165029|ENST00000374736|ABCA1'] 106524 9858 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 45.568 2 -0.6680216396993637 0.2030025609176366 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 125840 11378 VLAEKFGDLDP True NCI_RA007_Epitope_Rep1 1202.6183039676998 1202.61720993586 48.23 2 -0.6680305648089394 0.2030025609176366 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 121533 16155 VFATDDGF True PC9_epitope_Rep1 870.3759484440199 870.37484993586 66.955 2 -0.6680797725233315 0.2030025609176366 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 96776 17482 SAPPVILEQRR True NCI_RA007_Epitope_Rep5 1264.72516907808 1264.7240699358601 74.03 2 -0.6681000793975783 0.2030025609176366 1.0 ['IGSF10|p.A1839S|1|0.71|ENSG00000152580|chr3:151443432-151443432|C/A|missense_variant'] 42754 4567 IELRSFEVYDP True H1975_Epitope_Rep3 1366.6768814729799 1366.67524490379 22.688 3 -0.6681126859178732 0.2030025609176366 1.0 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 20248 4892 ENLVKNLNSEN True NCI_RA007_Epitope_Rep3 1272.6309939097198 1272.62988993586 26.231 2 -0.6681291273238236 0.2030025609176366 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 33955 12342 GLSHPQTPWWP True NCI_RA007_Epitope_Rep1 1304.63020606408 1304.62910993586 51.98 2 -0.6681470083303799 0.2030025609176366 1.0 ['ENST00000455245.1_1_9:68413936-68413987:-|nuORF'] 63038 11409 LLQANVQQDGK True H1975_Epitope_Rep3 1212.64625005104 1212.6451499358602 49.001 2 -0.668152329405074 0.2030025609176366 1.0 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-7|FLT1', 'nc|ENSG00000102755|P17948-8|FLT1'] 67897 10925 LTCGDHSDP True PC9_epitope_Rep1 943.37054579375 943.36944993586 46.909 2 -0.6682050757358292 0.2030025609176366 1.0 ['FAM135A|p.R1392G|1|0.15|ENSG00000082269|chr6:70538347-70538347|C/G|missense_variant'] 84704 12597 QDLSSYKFP True NCI_RA007_Epitope_Rep1 1083.52367530687 1083.52256993586 52.981 2 -0.6682080234970301 0.2030025609176366 1.0 ['ENSG00000183747|ENST00000573854|ACSM2A', 'ENSG00000066813|ENST00000329697|ACSM2B'] 16998 17661 EGALTLAVQ True PC9_epitope_Rep4 900.4916469026 900.49109496793 75.959 1 -0.6682979584971106 0.2031036756474936 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'ENST00000483412.5_1_9:123169248-123169542:-|nuORF'] 5685 12250 APAGPALGL True PC9_epitope_Rep6 765.43848913093 765.43738993586 58.497 2 -0.6683132802057876 0.2031036756474936 1.0 ['ENSG00000074356|ENST00000389005|NCBP3'] 90977 12118 RFDCVLKLVHH True PC9_epitope_Rep6 1365.73395993997 1365.7323149037902 57.956 3 -0.668328037850288 0.20311254216498006 1.0 ['ENSG00000184557|ENST00000330871|SOCS3'] 119022 14275 VAFHVQEV True PC9_epitope_Rep5 927.48141657207 927.48030993586 59.912 2 -0.6683804902957887 0.20311254216498006 1.0 ['ENST00000586178.5_1_17:49296359-49302518:-|nuORF'] 110566 7009 TFQWDKMWHWK True NCI_RA007_Epitope_Rep1 1591.73943924323 1591.73779490379 31.261 3 -0.6684198876141025 0.20311254216498006 1.0 ['ENST00000594919.1_1_19:52839677-52851056:+|nuORF'] 80491 16915 PGLRVLVL True PC9_epitope_Rep4 865.5749230340899 865.57382993586 73.052 2 -0.6684553316191336 0.20311254216498006 1.0 ['ENST00000269397.8_2_17:77807391-77807700:-|nuORF'] 97104 15939 SDIEIENGF True NCI_RA007_Epitope_Rep1 1022.4556553166999 1022.45454993586 66.099 2 -0.6684619581645572 0.20311254216498006 1.0 ['ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 88430 6654 QSPSANVL True NCI_RA007_Epitope_Rep4 814.41848196234 814.41793496793 32.216 1 -0.6684650243512589 0.20311254216498006 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'ENST00000471232.5_1_2:32750532-32815924:+|nuORF'] 116644 5512 TVARSPVAP True PC9_epitope_Rep4 896.5079656730799 896.50686993586 27.962 2 -0.6684769485021458 0.20311254216498006 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 39567 11727 HLGVPISI True H1975_Epitope_Rep2 834.4963383602201 834.49524993586 50.181 2 -0.6685000828805129 0.2031369783201987 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 94387 22135 RRRRGAGA True PC9_epitope_Rep3 898.5321637886598 898.5316149679301 90.436 1 -0.6685168772484342 0.2031369783201987 1.0 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 100719 18222 SLDRYWSV True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 75.103 2 -0.6685278313061924 0.20316452785060485 1.0 ['ADRA2C|p.T154M|1|0.53|ENSG00000184160|chr4:3767067-3767067|C/T|missense_variant', 'ENSG00000184160|ENST00000330055|ADRA2C'] 125019 19389 VICFIEREVP True PC9_epitope_Rep1 1203.63218021003 1203.63108993586 79.391 2 -0.6685742205932772 0.20317051482537637 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'PCDH9|p.L1216Wfs*4|1|0.35|ENSG00000184226|chr13:66304723-66304723|G/-|frameshift_variant', 'ENSG00000184226|ENST00000377865|PCDH9'] 60649 11102 LHLDSLISKNI True PC9_epitope_Rep2 1251.71868671531 1251.71704490379 48.027 3 -0.6685797773177511 0.20317051482537637 1.0 ['ENST00000505330.5_1_3:130569614-130569746:+|nuORF'] 67565 19126 LSTSETTVAP True PC9_epitope_Rep1 1004.50260550912 1004.50150993586 78.359 2 -0.6686129581253374 0.20317051482537637 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 44476 20169 ILLCMSLLLF True PC9_epitope_Rep6 1164.6650605614398 1164.6639699358602 90.254 2 -0.6686982205790736 0.20324405537584128 1.0 ['ENSG00000186160|ENST00000334194|CYP4Z1', 'nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P', 'nc|ENSG00000290456|Q8N1L4|CYP4Z2P'] 140459 959 YRHRRKYF True PC9_epitope_Rep3 1224.6628436050398 1224.6617499358601 5.3033 2 -0.668744000613706 0.2032560207257063 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 12533 7377 DKKKPSPPAP True NCI_RA007_Epitope_Rep5 1063.6025943339098 1063.6014899358602 35.055 2 -0.6687615494525486 0.2032560207257063 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 120953 12215 VEPAPVRRILK True H1975_Epitope_Rep1 1276.7979400955198 1276.79684993586 52.007 2 -0.6687678136492152 0.2032560207257063 1.0 ['ABCB11|p.N1148Kfs*17|1|0.25|ENSG00000073734|chr2:168927312-168927330|TGAGCGGAGGAACTGGACA/-|frameshift_variant', 'ABCB11|p.G1308Efs*6|1|0.31|ENSG00000073734|chr2:168923667-168923667|T/-|frameshift_variant', 'ENSG00000073734|ENST00000650372|ABCB11', 'ABCB11|p.R830Kfs*4|1|0.2|ENSG00000073734|chr2:168944726-168944727|-/T|frameshift_variant'] 23321 10332 EVQSESAQEP True PC9_epitope_Rep6 1102.4778473132599 1102.4767499358602 50.441 2 -0.6687758608604198 0.2032560207257063 1.0 ['nc|ENSG00000101197|Q96CA5-2|BIRC7', 'ENSG00000101197|ENST00000217169|BIRC7'] 76223 18376 NNWIYGEAL True PC9_epitope_Rep3 1078.5083595958997 1078.5072699358602 75.893 2 -0.668796057524224 0.2032560207257063 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 57931 12066 LEGILRELKE True NCI_RA007_Epitope_Rep2 1198.6921376142998 1198.69104993586 51.526 2 -0.6688172528358787 0.2032560207257063 1.0 ['ENSG00000205363|ENST00000569673|INSYN1'] 57713 8571 LEELEAAR True PC9_epitope_Rep1 929.4818104948899 929.48070993586 37.805 2 -0.6688944337194956 0.2033295520740718 1.0 ['ENSG00000108479|ENST00000588479|GALK1', 'GALK1|p.D268N|1|0.45|ENSG00000108479|chr17:75758591-75758591|C/T|missense_variant'] 122023 26173 VFVNLPRSR True PC9_epitope_Rep1 1086.62981214126 1086.6287099358601 106.0 2 -0.6689215881828287 0.2033570935847321 1.0 ['ENST00000416904.4_1_12:53574496-53575518:+|nuORF'] 46169 21374 ISLPDLLLP True PC9_epitope_Rep6 979.59538369515 979.59428993586 95.091 2 -0.6689639034025888 0.20338151662400172 1.0 ['ENST00000367204.5_1_1:204095788-204096322:+|nuORF'] 59059 18896 LEVVSRERRLK True H1975_Epitope_Rep2 1383.83103112895 1383.82939490379 78.447 3 -0.6689920663927219 0.20338151662400172 1.0 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 61002 17385 LIEKVSLIIF True PC9_epitope_Rep2 1173.7372969015698 1173.73564490379 72.134 3 -0.6690254375396467 0.20339372758208407 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 26492 15385 FIEWTKWSQEK True H1975_Epitope_Rep1 1480.7350650554397 1480.7339699358602 64.448 2 -0.6690455552232734 0.20341814837522992 1.0 ['nc|ENSG00000183704|A6NJY1|SLC9B1P1'] 11349 6778 DENRKVAL True PC9_epitope_Rep6 943.5086939490699 943.50758993586 34.891 2 -0.6690567778769528 0.20341814837522992 1.0 ['ENSG00000165943|ENST00000298894|MOAP1'] 60103 12282 LGLTDHAEL True PC9_epitope_Rep4 967.49746055903 967.49636993586 55.059 2 -0.6691129101899111 0.20343035821032787 1.0 ['OR5J2|p.C97Sfs*21|1|0.27|ENSG00000174957|chr11:56176907-56176907|G/-|frameshift_variant', 'OR5J2|p.A25Sfs*97|1|0.25|ENSG00000174957|chr11:56176685-56176686|-/A|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 45808 10504 ISDDIPLQLVT True NCI_RA007_Epitope_Rep1 1212.66016877968 1212.65906993586 44.841 2 -0.6691668504385306 0.2035038778700837 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 64108 14640 LPDRVATSRI True PC9_epitope_Rep5 1126.64585612822 1126.64422490379 61.313 3 -0.6692022046674003 0.2035160860168907 1.0 ['ENSG00000106723|ENST00000375859|SPIN1'] 73861 10472 NAQFKSLV True PC9_epitope_Rep6 905.4970666362099 905.49596993586 51.039 2 -0.6692299093122308 0.20354362086935196 1.0 ['nc|ENSG00000213619|O75489-2|NDUFS3', 'ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'ENSG00000213619|ENST00000263774|NDUFS3'] 22699 18137 ETRKIKHLR True NCI_RA007_Epitope_Rep3 1179.7200241279897 1179.71947496793 79.463 1 -0.6692401134292623 0.20355270821199767 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-3|SLC8A3', 'SLC8A1|p.H824Tfs*8|1|0.29|ENSG00000183023|chr2:40139476-40139476|G/-|frameshift_variant', 'nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1'] 73183 13838 MRWRWWQRLLP True H1975_Epitope_Rep3 1626.8717908254598 1626.8706899358601 58.536 2 -0.6692481278968133 0.20355270821199767 1.0 ['ENSG00000176410|ENST00000395176|DNAJC30'] 127458 13951 VNIWNPKRKLQ True NCI_RA007_Epitope_Rep2 1394.81465278882 1394.81354993586 58.923 2 -0.6693435594230092 0.203580241237145 1.0 ['ENST00000592676.1_1_17:74731222-74731732:-|nuORF', 'ENST00000392485.2_1_17:74731675-74731732:-|nuORF'] 19571 5739 ELQESSYSCE True H1975_Epitope_Rep3 1173.4495839600897 1173.4484899358602 27.102 2 -0.6693801413882383 0.2036046529448727 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 66372 13135 LSGGVVVSAI True PC9_epitope_Rep5 900.5280324113199 900.52692993586 55.527 2 -0.6693829523574178 0.2036046529448727 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 85550 7093 QGEKVGDAVET True PC9_epitope_Rep5 1131.5407819229897 1131.53968993586 32.249 2 -0.6694334411747986 0.20361685823754788 1.0 ['LRRTM4|p.S351G|1|0.19|ENSG00000176204|chr2:77518818-77518818|T/C|missense_variant'] 84082 5676 PWFWCFWPWGP True H1975_Epitope_Rep3 1507.6535843609497 1507.65193490379 26.861 3 -0.6694872675106245 0.20362282193922118 1.0 ['ENST00000267406.10_1_14:24897604-24898679:-|nuORF'] 80900 7421 PHWVRRRVR True NCI_RA007_Epitope_Rep4 1260.74282526124 1260.7411649037901 35.186 3 -0.6694942465537349 0.20362282193922118 1.0 ['ENST00000225964.9_1_17:48262093-48262309:-|nuORF'] 117358 4942 TVPESHQP True NCI_RA007_Epitope_Rep5 893.42429561877 893.42318993586 25.709 2 -0.6695007504760557 0.20362282193922118 1.0 ['ENST00000463889.5_1_9:35811007-35811933:-|nuORF'] 119421 11002 VAQLKFYSA True PC9_epitope_Rep1 1025.5545815123298 1025.5534899358602 47.207 2 -0.6695401663260069 0.20364410935392915 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 59393 22390 LFLLQPTV True PC9_epitope_Rep2 929.55860426361 929.55750993586 91.618 2 -0.6695470796449746 0.20364410935392915 1.0 ['NXPH1|p.E80*|1|0.04|ENSG00000122584|chr7:8751189-8751190|-/AT|frameshift_variant', 'NXPH1|p.P79Qfs*7|1|0.05|ENSG00000122584|chr7:8751188-8751189|-/AATG|frameshift_variant', 'ENSG00000122584|ENST00000405863|NXPH1'] 68666 21628 LTIWGRDRNGI True PC9_epitope_Rep1 1299.7047679866698 1299.70366993586 88.018 2 -0.6695533646885228 0.20364410935392915 1.0 ['ENST00000292174.4_1_11:118767763-118768351:+|nuORF'] 139943 6352 YQAQDVGT True PC9_epitope_Rep4 880.3926611373199 880.39156993586 31.51 2 -0.6696576281914951 0.20368355729892895 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 63573 22256 LMDYDGSRRGL True PC9_epitope_Rep3 1281.6135700237699 1281.6124699358602 90.893 2 -0.6696806243174885 0.20368355729892895 1.0 ['ENSG00000188070|ENST00000433688|ZFTA'] 25809 21355 FEYLERKYWK True PC9_epitope_Rep5 1460.7452358163198 1460.7436049037901 87.201 3 -0.6697249470882614 0.20368355729892895 1.0 ['KDM4D|p.D120Y|1|0.16|ENSG00000186280|chr11:94997730-94997730|G/T|missense_variant'] 112058 6220 TITATGSTTNP True NCI_RA007_Epitope_Rep2 1062.51931820242 1062.51822993586 28.802 2 -0.669742568941031 0.20368355729892895 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant'] 22147 15234 ESSAILIYL True NCI_RA007_Epitope_Rep3 1007.55391280599 1007.55337496793 67.451 1 -0.6697532067705758 0.20368355729892895 1.0 ['nc|ENSG00000133433|P0CG29|GSTT2', 'ENSG00000133433|ENST00000290765|GSTT2B'] 73135 16446 MRREENKRKWR True PC9_epitope_Rep3 1587.8528462860295 1587.85120490379 68.396 3 -0.6697601815976421 0.20368355729892895 1.0 ['ENST00000382622.3_1_12:3600592-3600649:+|nuORF'] 41944 8743 IDDTELMGAE True H1975_Epitope_Rep1 1092.4645057482398 1092.46340993586 38.559 2 -0.6697629873801735 0.20368355729892895 1.0 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 87463 7088 QQDAENAF True NCI_RA007_Epitope_Rep5 921.38282472961 921.38227496793 33.945 1 -0.6698114534197757 0.20368895152889271 1.0 ['ENST00000425046.1_1_3:4345037-4358927:+|nuORF', 'nc|ENSG00000170364|Q53H47-3|SETMAR', 'ENSG00000170364|ENST00000358065|SETMAR', 'HSMAR1_dup583|chr14:23628624-23629718:+|1.7841419024017564|0.342314790317388|2.38|516.0|10|1|sense'] 13056 9679 DLPELSDSGD True NCI_RA007_Epitope_Rep5 1046.44039917538 1046.4393099358601 43.866 2 -0.6698265224622689 0.20368895152889271 1.0 ['ENSG00000185238|ENST00000331079|PRMT3'] 82848 28120 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 115.92 3 -0.669844682617778 0.20368895152889271 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 63483 21305 LLWRLWEERER True H1975_Epitope_Rep1 1584.8524948495199 1584.8513899358602 88.505 2 -0.6698481089818842 0.20368895152889271 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF'] 45495 9790 IQNAQRRKQVN True NCI_RA007_Epitope_Rep1 1353.75892881785 1353.7578299358602 42.084 2 -0.6698534811182193 0.20368895152889271 1.0 ['ENST00000421692.5_2_6:30003742-30025305:-|nuORF', 'ENST00000431012.5_1_6:30024744-30025305:-|nuORF'] 86328 10245 QIVSFYFKLFK True H1975_Epitope_Rep1 1418.7962087600197 1418.7951099358602 44.35 2 -0.6698832042058444 0.20368895152889271 1.0 ['ENSG00000111537|ENST00000229135|IFNG'] 53523 27273 KRLILRLEIWI True PC9_epitope_Rep3 1451.93403964551 1451.93239490379 112.29 3 -0.669922062955694 0.20368895152889271 1.0 ['DCBLD1|p.G85Efs*31|1|0.56|ENSG00000164465|chr6:117503906-117503906|G/-|frameshift_variant'] 95576 16515 RWSRRTLYVQ True PC9_epitope_Rep4 1363.74730150499 1363.7462099358602 71.497 2 -0.6699250307041803 0.20368895152889271 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 28656 10930 FSMKLMGSL True PC9_epitope_Rep5 1012.5085599200399 1012.50746993586 47.032 2 -0.6699397505205514 0.20368895152889271 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 29988 6347 FWWDRWLCKNR True NCI_RA007_Epitope_Rep2 1608.7772217342797 1608.7755749037901 29.295 3 -0.669958762667911 0.20368895152889271 1.0 ['ENST00000491103.5_1_6:10748006-10756744:+|nuORF'] 12854 11431 DLGWPEVP True PC9_epitope_Rep2 911.4388830537499 911.43778993586 49.289 2 -0.6699777728756209 0.20368895152889271 1.0 ['ENSG00000125998|ENST00000374408|FAM83C', 'FAM83C|p.N530Qfs*40|1|0.45|ENSG00000125998|chr20:35287191-35287192|-/G|frameshift_variant'] 44559 6202 ILNSFEHEFLS True NCI_RA007_Epitope_Rep1 1334.65066672514 1334.6495699358602 28.159 2 -0.670037418635493 0.20368895152889271 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 100237 17097 SIWLLRTEFVL True PC9_epitope_Rep5 1375.78637235231 1375.78471490379 70.786 3 -0.67005048190641 0.20368895152889271 1.0 ['UGT1A8|p.D256E|1|0.35|ENSG00000242366|chr2:233618475-233618475|C/A|missense_variant'] 92419 19411 RLRAPAEIRV True NCI_RA007_Epitope_Rep1 1179.72002412799 1179.7189299358602 79.658 2 -0.6700558417739512 0.20370115048179296 1.0 ['PXDN|p.N750Tfs*115|1|0.06|ENSG00000130508|chr2:1649527-1649531|CAGGT/-|frameshift_variant'] 10672 9682 CPWYRFCR True H1975_Epitope_Rep1 1129.4949755445698 1129.4938699358602 42.166 2 -0.6700808302931075 0.2037561849905789 1.0 ['ENSG00000170832|ENST00000300896|USP32', 'USP32|p.W1169C|1|0.36|ENSG00000170832|chr17:60192858-60192858|C/A|missense_variant'] 85525 14445 QGAGSVLF True PC9_epitope_Rep6 777.40210362221 777.40100993586 67.453 2 -0.6701072325607442 0.2037561849905789 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 91114 8075 RFSFSPTGMLK True H1975_Epitope_Rep1 1269.6539782837701 1269.65288993586 36.004 2 -0.6701192701426261 0.20376838235294117 1.0 ['ENSG00000089505|ENST00000379500|CMTM1'] 84352 19640 PYWKKRFLHMK True PC9_epitope_Rep5 1532.8438447421197 1532.84218490379 80.6 3 -0.6701363593222861 0.20378057934161548 1.0 ['ENST00000476943.1_1_13:49956911-49975339:-|nuORF'] 49654 5333 KGKKRKKILPN True NCI_RA007_Epitope_Rep1 1308.8717737421198 1308.8706699358602 24.823 2 -0.6701693962469571 0.203792775956619 1.0 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'ENST00000262949.7_1_19:3573736-3575577:+|nuORF', 'ENST00000486028.1_1_19:3574329-3575756:+|nuORF'] 101966 12888 SLQFPWPL True PC9_epitope_Rep5 986.5225531080598 986.52144993586 54.584 2 -0.6702088627268309 0.20380497219796884 1.0 ['ENST00000448876.5_1_3:185009604-185009661:+|nuORF'] 64720 14410 LPWARELESRE True PC9_epitope_Rep5 1384.70991293676 1384.70880993586 60.427 2 -0.6702133703041238 0.20381716806568226 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 100957 11006 SLFLFKDTP True NCI_RA007_Epitope_Rep5 1066.5698972233 1066.5688099358601 48.969 2 -0.6702589277230763 0.20382936355977638 1.0 ['ENST00000468925.1_1_2:198272706-198273336:-|nuORF'] 132334 10169 VTYRSATDP True PC9_epitope_Rep3 1008.4876241513199 1008.48652993586 44.068 2 -0.6703569308798636 0.20391814477835984 1.0 ['ENSG00000163013|ENST00000520530|FBXO41'] 56376 13919 LDDSALYLSDK True PC9_epitope_Rep1 1238.60304782638 1238.6019499358601 58.375 2 -0.6703921818140178 0.20394847681916345 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 130704 7137 VSVETRNV True PC9_epitope_Rep3 902.48214484806 902.48104993586 32.461 2 -0.6703981003390366 0.20394847681916345 1.0 ['ENST00000341853.5_1_15:100340094-100345094:-|nuORF', 'nc|ENSG00000182397|Q6ZS02|DNM1P46'] 932 10059 ADNILSAVP True H1975_Epitope_Rep2 898.47599683846 898.47544496793 43.683 1 -0.670427056273619 0.20394847681916345 1.0 ['nc|ENSG00000198022|A6NJ88|SAGE2P'] 63336 18754 LLTGLALPTL True PC9_epitope_Rep4 1010.6375828603 1010.63648993586 80.219 2 -0.6704762353702834 0.20394847681916345 1.0 ['ENSG00000179921|ENST00000519574|GPBAR1'] 78925 7177 PAGREMAV True PC9_epitope_Rep5 829.4116227600898 829.41052993586 32.573 2 -0.6704770754503788 0.20394847681916345 1.0 ['ENST00000583444.1_1_17:80187666-80187933:+|nuORF'] 38635 8792 HFHFTARYIRI True PC9_epitope_Rep2 1459.7836870137098 1459.78204490379 39.172 3 -0.6705313386773274 0.2039575452192425 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 127426 15613 VNFSQDPDV True PC9_epitope_Rep4 1019.4559896698698 1019.45488993586 67.979 2 -0.6705698138179212 0.2039575452192425 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|12|fusion', 'CLTC|p.L1583Pfs*11|1|0.08|ENSG00000141367|chr17:59685728-59685729|-/CAGGAGGTGGAGGTTGCAGTGAGCTGAGA|frameshift_variant', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|5|fusion', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 96862 16753 SASIGVVGV True PC9_epitope_Rep1 787.44396843419 787.44286993586 69.268 2 -0.6705879448770795 0.20397880421465328 1.0 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 111697 8924 TIFMKGLQML True PC9_epitope_Rep6 1180.6348230623198 1180.63318490379 44.302 3 -0.6706065565111561 0.20397880421465328 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000552430.5_1_12:51442859-51449674:+|nuORF', 'ENST00000547877.5_1_12:51442859-51453215:+|nuORF'] 65705 7492 LSAVDGTVTL True H1975_Epitope_Rep1 974.52842633414 974.5273299358599 33.814 2 -0.6706133069964663 0.20397880421465328 1.0 ['ENST00000490941.1_1_3:170670926-170671100:-|nuORF', 'nc|ENSG00000118263|O75840-3|KLF7', 'nc|ENSG00000118263|O75840-2|KLF7', 'nc|ENSG00000118263|O75840-4|KLF7', 'ENSG00000118263|ENST00000309446|KLF7'] 118133 14402 TYILNHSSI True PC9_epitope_Rep2 1046.5396597241802 1046.53856993586 60.661 2 -0.6706446089072591 0.20398787099145457 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 44995 7743 IPAVEGQW True NCI_RA007_Epitope_Rep3 898.45486747106 898.45376993586 37.579 2 -0.6707021240646668 0.20398787099145457 1.0 ['ENST00000353704.2_2_9:35732632-35732818:+|nuORF'] 114882 10252 TQRLRWLRGRP True NCI_RA007_Epitope_Rep2 1437.8429332253297 1437.84127490379 44.471 3 -0.6707880960149518 0.2040000612566808 1.0 ['ENST00000608354.1_1_22:30642479-30642794:+|nuORF'] 114354 10374 TPSATAVPP True H1975_Epitope_Rep2 839.4388830537499 839.43833496793 44.914 1 -0.670905002503658 0.20408882082695254 1.0 ['ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 101724 9371 SLNFRKTTK True NCI_RA007_Epitope_Rep1 1093.62439240765 1093.6232899358602 40.442 2 -0.6709805895069453 0.20411632287407544 1.0 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L'] 142161 13959 YVTALYITS True H1975_Epitope_Rep1 1029.5382627418498 1029.5371699358602 58.85 2 -0.670990677845529 0.20411913329760356 1.0 ['nc|ENSG00000178904|Q6ZPD9-2|DPY19L3', 'ENSG00000178904|ENST00000392250|DPY19L3'] 113218 12112 TLQKKDFP True PC9_epitope_Rep1 975.5389314481898 975.53782993586 51.451 2 -0.6710006574308528 0.20411913329760356 1.0 ['ENSG00000072858|ENST00000264852|SIDT1', 'nc|ENSG00000072858|Q9NXL6-2|SIDT1'] 135218 7552 WEYDHSEF True H1975_Epitope_Rep2 1111.42468954159 1111.42358993586 34.002 2 -0.6710513033403512 0.20411913329760356 1.0 ['nc|ENSG00000137204|Q9Y694-3|SLC22A7', 'nc|ENSG00000137204|Q9Y694-2|SLC22A7', 'ENSG00000137204|ENST00000372585|SLC22A7'] 127543 13104 VNQVVPKKRWQ True NCI_RA007_Epitope_Rep1 1380.7990027246797 1380.7979099358602 54.966 2 -0.6711014962155107 0.20411913329760356 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 133732 4450 VYDREVQWT True H1975_Epitope_Rep3 1194.5669371011797 1194.5658499358601 22.239 2 -0.6711508224627855 0.20416194530364745 1.0 ['ENSG00000198018|ENST00000370489|ENTPD7', 'ENST00000493385.5_1_10:101462344-101482741:+|nuORF'] 60733 17686 LHRGRRLLGP True PC9_epitope_Rep1 1173.7206928343298 1173.71958993586 72.824 2 -0.6712209290545165 0.20418944370435022 1.0 ['ENST00000424383.4_1_7:1784183-1785002:+|nuORF'] 77426 10147 NSLGVVPYL True H1975_Epitope_Rep3 960.5280324113198 960.52692993586 44.074 2 -0.6712832471983211 0.20422599908130454 1.0 ['ENSG00000054598|ENST00000645831|FOXC1'] 59903 14945 LGGLIIGR True PC9_epitope_Rep1 797.51232277753 797.51122993586 62.308 2 -0.6712895558003857 0.20422599908130454 1.0 ['ENST00000479950.5_1_6:41034807-41034939:-|nuORF'] 135958 14976 WQFLRKNWNKL True PC9_epitope_Rep5 1531.8412018898296 1531.83955490379 62.609 3 -0.6712936035544151 0.20422599908130454 1.0 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1'] 102428 12812 SLTPTEVPL True H1975_Epitope_Rep2 955.52261267771 955.52150993586 54.389 2 -0.6713507758197526 0.20423818346067277 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549'] 102700 12131 SLYYHIRMSKM True PC9_epitope_Rep2 1427.70536223363 1427.70426993586 51.972 2 -0.6713826604864607 0.204265678588927 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 71165 9857 LYMKNGQGF True PC9_epitope_Rep4 1056.5062514209196 1056.5051499358601 45.565 2 -0.6714023274205182 0.20429317287523158 1.0 ['nc|ENSG00000127314|P61224-4|RAP1B', 'ENST00000494982.1_1_1:112233982-112249293:+|nuORF', 'nc|ENSG00000127314|P61224-3|RAP1B', 'nc|ENSG00000254893|A6NIZ1|RAP1BL', 'ENSG00000127314|ENST00000250559|RAP1B', 'ENSG00000116473|ENST00000369709|RAP1A'] 56407 10190 LDEDEDDLE True PC9_epitope_Rep5 1091.41424399719 1091.41314993586 44.183 2 -0.6714287191093038 0.2043206663196252 1.0 ['ENSG00000162627|ENST00000306121|SNX7', 'ENST00000473868.5_1_1:99127404-99128258:+|nuORF', 'SNX7|p.T154Lfs*2|1|0.28|ENSG00000162627|chr1:98691171-98691171|A/-|frameshift_variant'] 96729 10314 SALQQAVP True H1975_Epitope_Rep3 812.4392174069199 812.43812993586 44.726 2 -0.6715076976934432 0.204323463670045 1.0 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 47333 20677 IVFFTYRVP True PC9_epitope_Rep1 1140.6331661862 1140.63206993586 84.357 2 -0.6715098608588083 0.204323463670045 1.0 ['ENST00000379774.4_1_17:10608340-10608511:+|nuORF'] 38536 4150 HESFGYKRE True NCI_RA007_Epitope_Rep2 1151.5359713260698 1151.53432490379 20.781 3 -0.6715193060676292 0.204323463670045 1.0 ['ENST00000494481.5_1_3:62304831-62304894:+|nuORF'] 36970 3643 GVMNFEISFK True NCI_RA007_Epitope_Rep4 1170.5743309807397 1170.57268490379 20.095 3 -0.6715262074004646 0.204323463670045 1.0 ['USH2A|p.G1735V|1|0.21|ENSG00000042781|chr1:216083550-216083550|C/A|missense_variant'] 55128 8943 LAADPSHP True PC9_epitope_Rep1 806.3922672145 806.39116993586 39.24 2 -0.6716473508598886 0.20440872560275544 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 76593 19429 NQLVCKMNSDP True PC9_epitope_Rep1 1247.56384295003 1247.5627499358602 79.546 2 -0.6716495915944918 0.20440872560275544 1.0 ['nc|ENSG00000122417|Q9ULJ1-3|ODF2L', 'nc|ENSG00000122417|Q9ULJ1|ODF2L'] 131710 19977 VTNVGAYILYF True PC9_epitope_Rep3 1258.65977485686 1258.6586699358602 82.087 2 -0.6716640964917594 0.20440872560275544 1.0 ['ENSG00000109929|ENST00000264027|SC5D', 'ENST00000534455.5_1_11:121174081-121175207:+|nuORF', 'ENST00000531140.1_1_11:121174081-121177378:+|nuORF', 'ENST00000524683.5_1_11:121174081-121174345:+|nuORF'] 1639 8935 AEFSLHCETNL True PC9_epitope_Rep1 1262.5601374685798 1262.55904993586 39.209 2 -0.6716657570267265 0.20440872560275544 1.0 ['ENSG00000139318|ENST00000279488|DUSP6'] 62537 18349 LLKEQKCVP True PC9_epitope_Rep6 1056.6001518057599 1056.5990499358602 83.222 2 -0.6716761342507557 0.20440872560275544 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5'] 60764 10851 LHSEVGAGPAV True PC9_epitope_Rep2 1035.5349086969097 1035.53380993586 47.055 2 -0.6716888276850358 0.20440872560275544 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000515868.5_1_4:845337-862348:-|nuORF', 'ENST00000509566.1_1_4:844107-866085:-|nuORF'] 113715 14126 TLYRNRRK True PC9_epitope_Rep5 1105.64685918773 1105.64576993586 59.346 2 -0.6716920639036016 0.20440872560275544 1.0 ['ENST00000506451.1_1_4:120415631-120418847:+|nuORF'] 68929 4766 LTPCHGAL True PC9_epitope_Rep2 810.4058091036599 810.40470993586 23.702 2 -0.6717217556535321 0.20443621222790312 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 103778 8270 SPVVPAPR True PC9_epitope_Rep3 821.47593726881 821.47484993586 36.785 2 -0.6717855672048542 0.20445709737655737 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 4788 25566 ALDVLAILTVV True PC9_epitope_Rep3 1125.70091139285 1125.69980993586 103.83 2 -0.6717936416423472 0.20445709737655737 1.0 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 44421 17742 ILGPTALIGI True PC9_epitope_Rep2 966.6113681124599 966.61026993586 73.527 2 -0.6718190109520767 0.20445709737655737 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 72151 19146 MFVFKERWFWR True PC9_epitope_Rep5 1630.8231092975398 1630.82200993586 78.68 2 -0.6718244263528486 0.20445709737655737 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 86278 20268 QIRLLRILLII True H1975_Epitope_Rep3 1362.9438760532198 1362.9422249037902 84.759 3 -0.6718417151509262 0.20445709737655737 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 130774 10415 VTAEDLHLEKE True H1975_Epitope_Rep3 1282.6404959642598 1282.6393899358602 45.12 2 -0.671878084044629 0.20445709737655737 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF'] 66324 7821 LSFYLLKWLDP True NCI_RA007_Epitope_Rep1 1393.7645742785699 1393.76346993586 34.414 2 -0.6718859493319359 0.20445709737655737 1.0 ['nc|ENSG00000119402|Q9UKT8-2|FBXW2', 'ENSG00000119402|ENST00000608872|FBXW2'] 56055 19831 LASWRWPHWSW True PC9_epitope_Rep5 1510.7258377844198 1510.72420490379 81.326 3 -0.6718877062739218 0.20445709737655737 1.0 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 41158 6928 HVFALECK True H1975_Epitope_Rep3 945.47422301665 945.47312993586 31.609 2 -0.6719014937278853 0.20446927374301677 1.0 ['nc|ENSG00000164306|Q96LW4-2|PRIMPOL', 'ENSG00000164306|ENST00000314970|PRIMPOL'] 121442 10310 VEWMEDSWRQR True NCI_RA007_Epitope_Rep1 1520.6830465659198 1520.68194993586 44.099 2 -0.6719255523140533 0.20448144973674545 1.0 ['ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 8739 9622 AVAYIAGF True NCI_RA007_Epitope_Rep3 810.4275900940598 810.42648993586 44.929 2 -0.6719872036465799 0.20451797548171843 1.0 ['ENSG00000157240|ENST00000287934|FZD1'] 97188 13953 SDVVSTRPRWN True NCI_RA007_Epitope_Rep1 1315.66329709751 1315.6622099358601 58.298 2 -0.6719889361248638 0.20451797548171843 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'nc|ENSG00000128159|Q96RT7-2|TUBGCP6', 'ENST00000491449.5_1_22:50658476-50664613:-|nuORF'] 11920 5391 DHMASSIERI True PC9_epitope_Rep1 1157.54990713805 1157.5482749037901 25.571 3 -0.6720155031225561 0.20451797548171843 1.0 ['HNRNPM|p.M472I|1|0.28|ENSG00000099783|chr19:8485844-8485844|G/T|missense_variant'] 10310 11247 CDPEELEEK True NCI_RA007_Epitope_Rep1 1090.4488556841 1090.4477499358602 47.748 2 -0.6720531919040827 0.20452980335144236 1.0 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'ENST00000529206.1_1_14:95595738-95599795:-|nuORF'] 63756 11402 LNEISEETTIQ True PC9_epitope_Rep5 1275.61942616651 1275.6183299358602 48.855 2 -0.6721528578972428 0.20452980335144236 1.0 ['ENSG00000164118|ENST00000503780|CEP44'] 19743 9754 ELRTYVMPNAP True PC9_epitope_Rep3 1289.64380752289 1289.64217490379 42.472 3 -0.6721602845483677 0.20452980335144236 1.0 ['ENSG00000167136|ENST00000372642|ENDOG'] 75294 10491 NIKEYRDSFSY True H1975_Epitope_Rep3 1420.6622940379998 1420.6611899358602 45.417 2 -0.672164948986793 0.20452980335144236 1.0 ['ENST00000424738.1_1_10:117226695-117357303:+|nuORF', 'ENSG00000107518|ENST00000355044|ATRNL1'] 27336 14361 FLSKDDNV True PC9_epitope_Rep5 936.4552613938799 936.45416993586 60.24 2 -0.6721738059777019 0.20452980335144236 1.0 ['ENSG00000117501|ENST00000367759|MROH9'] 42734 5072 IELDHASLEE True NCI_RA007_Epitope_Rep2 1154.54553295026 1154.54442993586 24.354 2 -0.6721794972396391 0.20452980335144236 1.0 ['ENSG00000225830|ENST00000355832|ERCC6', 'ERCC6|p.A391Qfs*14|1|0.55|ENSG00000225830|chr10:49524259-49524259|C/-|frameshift_variant', 'ERCC6|p.E432Kfs*8|1|0.1|ENSG00000225830|chr10:49524136-49524136|C/-|frameshift_variant', 'nc|ENSG00000225830|P0DP91|ERCC6'] 48842 2737 KDWLVENAPG True H1975_Epitope_Rep2 1127.56112344475 1127.55946490379 14.585 3 -0.6722960002414624 0.20454197655556575 1.0 ['ENSG00000171451|ENST00000310045|DSEL', 'DSEL|p.R969Efs*16|1|0.2|ENSG00000171451|chr18:67511734-67511734|T/-|frameshift_variant', 'DSEL|p.H420Tfs*39|1|0.4|ENSG00000171451|chr18:67513382-67513382|T/-|frameshift_variant', 'DSEL|p.W470*|1|0.06|ENSG00000171451|chr18:67513229-67513229|C/-|frameshift_variant', 'DSEL|p.G761Afs*5|1|0.89|ENSG00000171451|chr18:67512357-67512357|C/-|frameshift_variant'] 92420 19613 RLRAPAEIRV True NCI_RA007_Epitope_Rep2 1179.72002412799 1179.7189299358602 81.239 2 -0.672401807485605 0.20454788902661097 1.0 ['PXDN|p.N750Tfs*115|1|0.06|ENSG00000130508|chr2:1649527-1649531|CAGGT/-|frameshift_variant'] 30897 17665 GAPVCCRK True NCI_RA007_Epitope_Rep3 832.4047635578399 832.40366993586 77.456 2 -0.6724166998713444 0.20454788902661097 1.0 ['ENST00000537045.5_1_22:19026088-19026367:-|nuORF'] 64352 9674 LPLIVKHIRK True NCI_RA007_Epitope_Rep4 1215.8179472641098 1215.81631490379 44.06 3 -0.6724305907624659 0.20454788902661097 1.0 ['ENSG00000179213|ENST00000601727|SIGLECL1'] 45234 6700 IPTIIRRDDP True H1975_Epitope_Rep1 1194.67207087606 1194.67096993586 30.817 2 -0.672461802626933 0.20459066564651873 1.0 ['nc|ENSG00000165802|Q6X4W1-4|NSMF', 'nc|ENSG00000165802|Q6X4W1-6|NSMF', 'nc|ENSG00000165802|Q6X4W1-3|NSMF', 'nc|ENSG00000165802|Q6X4W1-2|NSMF', 'ENSG00000165802|ENST00000371475|NSMF', 'ENST00000371468.1_2_9:140347082-140348912:-|nuORF', 'ENST00000371482.5_2_9:140343848-140347544:-|nuORF'] 120145 9173 VEAKLEHWYIT True H1975_Epitope_Rep1 1387.7136013348697 1387.71250993586 40.189 2 -0.6725053341622861 0.20460283698795734 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant', 'ENST00000561258.1_1_15:62276000-62283926:-|nuORF'] 63246 16692 LLSLIHLV True PC9_epitope_Rep5 906.59023874506 906.58914993586 69.21 2 -0.6725995051964615 0.20461187703701436 1.0 ['ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4'] 11534 17250 DFPELKFGVI True NCI_RA007_Epitope_Rep1 1163.6226610721499 1163.6215699358602 71.229 2 -0.6726225393619998 0.20461187703701436 1.0 ['PDILT|p.T202K|1|0.04|ENSG00000169340|chr16:20374898-20374898|G/T|missense_variant'] 93443 18788 RQGRLPRIP True H1975_Epitope_Rep2 1091.6675946323098 1091.66648993586 78.011 2 -0.6726619571727436 0.20463934877742754 1.0 ['ENSG00000166483|ENST00000450114|WEE1', 'nc|ENSG00000166483|P30291-2|WEE1'] 20120 4699 EMTAKVRDLQ True H1975_Epitope_Rep3 1189.61250739461 1189.6108649037901 23.2 3 -0.6726914306408319 0.20465151862902609 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 22961 6520 EVEPGCHHIPQ True NCI_RA007_Epitope_Rep1 1244.5608061749201 1244.5597099358602 29.376 2 -0.672733856412988 0.20465429397634602 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF', 'ENST00000561954.1_1_16:1607934-1614087:-|nuORF'] 86277 20838 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 86.282 3 -0.6727965756721639 0.20465429397634602 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 136722 7398 WYEEEESF True PC9_epitope_Rep1 1117.4240208352498 1117.42292993586 33.27 2 -0.6727975961840944 0.20465429397634602 1.0 ['ENSG00000074771|ENST00000159060|NOX3'] 31174 20209 GAYKFEKDF True PC9_epitope_Rep1 1103.5287606873098 1103.52766993586 82.563 2 -0.6728010815572661 0.20465429397634602 1.0 ['ENSG00000120137|ENST00000239231|PANK3', 'ENST00000525487.2_1_11:50227376-50227820:+|nuORF'] 99688 5211 SIGVVGVK True NCI_RA007_Epitope_Rep4 757.4697892592098 757.46868993586 26.579 2 -0.672850514461575 0.20465706898398175 1.0 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 16066 7258 EDYQTESGQP True NCI_RA007_Epitope_Rep1 1152.45711186868 1152.45600993586 32.222 2 -0.6728876686240375 0.20465706898398175 1.0 ['ENST00000465814.5_1_11:72423956-72425365:-|nuORF'] 138736 12992 YIREFEII True NCI_RA007_Epitope_Rep4 1081.5807962601698 1081.5796899358602 57.073 2 -0.672899585120877 0.20465706898398175 1.0 ['RPS15A|p.G48R|1|0.21|ENSG00000134419|chr16:18788134-18788134|C/G|missense_variant'] 70588 5470 LWHFRYESLKH True PC9_epitope_Rep5 1514.7782672801 1514.7766349037902 26.051 3 -0.6729551835077553 0.20465706898398175 1.0 ['ENSG00000105851|ENST00000496166|PIK3CG', 'PIK3CG|p.L626*|1|0.13|ENSG00000105851|chr7:106869434-106869434|G/-|frameshift_variant'] 11200 13554 DEAESWIKEK True H1975_Epitope_Rep3 1233.5877321154096 1233.5866299358602 57.417 2 -0.6730060142791526 0.20466923688880728 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 70655 26512 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 108.49 3 -0.6731204559015859 0.20470887005476854 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 33821 8034 GLMLYFRIRFY True NCI_RA007_Epitope_Rep1 1477.7904121869296 1477.78876490379 35.248 3 -0.6731223730689966 0.20470887005476854 1.0 ['TYK2|p.S98G|1|0.09|ENSG00000105397|chr19:10368320-10368320|T/C|missense_variant'] 49168 7095 KELGDAWN True PC9_epitope_Rep1 931.43994568291 931.43884993586 32.1 2 -0.6731893860053567 0.20481282604372236 1.0 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF', 'ENST00000485793.5_1_3:93781949-93800453:+|nuORF'] 135 7374 AAAYRLAQN True PC9_epitope_Rep1 976.5090283022399 976.50792993586 33.177 2 -0.6732027877256198 0.20482499082119693 1.0 ['ENST00000512206.1_1_12:54428374-54428791:+|nuORF'] 25814 22404 FFCDDGCC True H1975_Epitope_Rep3 908.2502966320399 908.24918993586 93.656 2 -0.6732685418945817 0.2048493192595992 1.0 ['ENSG00000120256|ENST00000239367|LRP11'] 36153 10889 GVARLFTKV True PC9_epitope_Rep4 989.6022004110899 989.60110993586 49.651 2 -0.6732817942570428 0.2048493192595992 1.0 ['nc|ENSG00000135318|P21589-2|NT5E', 'ENSG00000135318|ENST00000257770|NT5E'] 25292 22591 FDPVIKLRHSG True PC9_epitope_Rep4 1267.70370535751 1267.70206490379 95.128 3 -0.6733575649659477 0.2048917033773862 1.0 ['CKMT2|p.N132S|1|0.24|ENSG00000131730|chr5:81254439-81254439|A/G|missense_variant'] 119232 8467 VALAVSTT True PC9_epitope_Rep1 760.4330693973201 760.43196993586 37.404 2 -0.6733639030231099 0.2048917033773862 1.0 ['ENSG00000162512|ENST00000339394|SDC3'] 46613 15668 ITDGARNLDLK True PC9_epitope_Rep3 1214.66190011518 1214.66080993586 65.411 2 -0.6733902943616458 0.2048917033773862 1.0 ['NRXN1|p.A1015D|1|0.31|ENSG00000179915|chr2:50495931-50495931|G/T|missense_variant'] 94689 20677 RRYRRNFNYRR True NCI_RA007_Epitope_Rep2 1655.8981566856696 1655.8970499358602 85.516 2 -0.6734016435136498 0.2048917033773862 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 116922 19342 TVFSYFIKYW True PC9_epitope_Rep2 1352.6805103014399 1352.6794099358601 79.772 2 -0.6734111507997941 0.2048917033773862 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 114327 18472 TPQSYETLE True PC9_epitope_Rep5 1066.4818700645399 1066.48076993586 76.074 2 -0.673479829238685 0.2048917033773862 1.0 ['nc|ENSG00000130775|Q5TEJ8-2|THEMIS2', 'THEMIS2|p.Q381Rfs*18|1|0.43|ENSG00000130775|chr1:27882464-27882464|C/-|frameshift_variant', 'nc|ENSG00000130775|Q5TEJ8-6|THEMIS2', 'nc|ENSG00000130775|Q5TEJ8-3|THEMIS2', 'nc|ENSG00000130775|Q5TEJ8-5|THEMIS2', 'THEMIS2|p.Q558Rfs*11|1|0.08|ENSG00000130775|chr1:27882997-27882998|AG/-|frameshift_variant', 'ENSG00000130775|ENST00000373921|THEMIS2'] 88446 9735 QSQLRRYWEWS True H1975_Epitope_Rep3 1537.74261004737 1537.7415099358602 42.467 2 -0.6734862613347855 0.20489759708774988 1.0 ['ENST00000596373.1_1_19:53683054-53693528:-|nuORF'] 130379 8080 VSLARQRLGNA True H1975_Epitope_Rep1 1183.6785532388299 1183.67744993586 36.023 2 -0.6735101997868438 0.20489759708774988 1.0 ['ENST00000504307.1_2_17:48249233-48249365:-|nuORF'] 78642 13862 NYTKIEQL True NCI_RA007_Epitope_Rep1 1007.5287606873098 1007.52766993586 57.939 2 -0.6735160676412785 0.20489759708774988 1.0 ['ENST00000491354.5_2_2:27245086-27245656:+|nuORF', 'ENST00000494788.1_1_2:27245086-27245308:+|nuORF', 'ENST00000481222.5_1_2:27224957-27246540:+|nuORF', 'nc|ENSG00000084764|Q9UPY8-2|MAPRE3', 'ENSG00000084764|ENST00000233121|MAPRE3'] 92710 16129 RNSMHKGIPS True NCI_RA007_Epitope_Rep5 1125.5713112889698 1125.56965490379 68.774 3 -0.6735792393715232 0.20495564392780666 1.0 ['TDRD5|p.R108I|1|0.55|ENSG00000162782|chr1:179593550-179593550|G/T|missense_variant'] 6727 10323 AQAPSSTISL True PC9_epitope_Rep3 973.50802524273 973.50692993586 44.652 2 -0.6736076694722362 0.20497682883930074 1.0 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 12590 5567 DKYVFEKMEEK True NCI_RA007_Epitope_Rep2 1444.69081728496 1444.68916490379 26.27 3 -0.6736270468559624 0.20497682883930074 1.0 ['ENSG00000273559|ENST00000614790|CWC25'] 66866 8220 LSNGPPAP True PC9_epitope_Rep1 751.38645355807 751.38534993586 36.451 2 -0.6736408400660918 0.20497682883930074 1.0 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3', 'nc|ENSG00000149499|Q32P44-3|EML3'] 88740 18757 QTLEMNLTNL True PC9_epitope_Rep4 1175.58562394043 1175.58452993586 80.231 2 -0.6736710716002897 0.20498585302439398 1.0 ['nc|ENSG00000080561|Q9UJV3-2|MID2', 'ENSG00000080561|ENST00000262843|MID2'] 131635 23745 VTLTNLISLN True NCI_RA007_Epitope_Rep4 1086.62847472858 1086.62736993586 102.95 2 -0.6737097559450423 0.20498585302439398 1.0 ['ENSG00000108556|ENST00000649488|CHRNE'] 137110 12435 YARSKNWRLSV True H1975_Epitope_Rep1 1378.7469671518202 1378.74532490379 52.868 3 -0.6737575977417242 0.20499174160396402 1.0 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'ENST00000496870.1_1_2:231256806-231265091:+|nuORF'] 121397 15823 VEVSIFPV True PC9_epitope_Rep5 888.4956696538799 888.49456993586 65.854 2 -0.6737598923968998 0.20499174160396402 1.0 ['chr8:61633724-61637947|150|31.71|0.65|5.6|-|2|None,ASPH|1'] 116130 13726 TSSRAFLL True PC9_epitope_Rep6 893.4970666362099 893.49596993586 64.584 2 -0.6737947857357426 0.20499174160396402 1.0 ['ENST00000505667.5_1_4:169432617-169432773:+|nuORF'] 61596 24535 LKKVLKKIVKE True NCI_RA007_Epitope_Rep1 1324.9169925990398 1324.9158899358602 101.64 2 -0.6738826834395601 0.20500389973848812 1.0 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'NOP58|p.R150Ifs*3|1|0.07|ENSG00000055044|chr2:202287668-202287669|-/AT|frameshift_variant', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF', 'ENST00000472050.5_1_2:203130664-203149064:+|nuORF'] 68489 16779 LTFQLFLIL True NCI_RA007_Epitope_Rep4 1106.6739683690198 1106.67286993586 72.725 2 -0.6739188714929321 0.20501605750114696 1.0 ['ENST00000513762.2_1_4:2909397-2910421:+|nuORF'] 76992 3119 NRGERDRERER True PC9_epitope_Rep5 1471.7352332511498 1471.7335949037902 16.991 3 -0.6740227143251895 0.20507409276505942 1.0 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 131986 10332 VTSKFTGMHLY True H1975_Epitope_Rep1 1282.63799386646 1282.6363349037902 44.689 3 -0.6740766538720793 0.20508311287140826 1.0 ['nc|ENSG00000126970|Q9NQZ6-4|ZC4H2'] 116184 14044 TSVMYSISLYI True H1975_Epitope_Rep2 1275.6420761873899 1275.64096993586 59.172 2 -0.6740826274011605 0.20508311287140826 1.0 ['ENST00000346798.7_1_21:27253751-27253829:-|nuORF'] 111243 24862 THKRIHIG True PC9_epitope_Rep4 960.5617325814399 960.5611849679301 104.15 1 -0.6741295334796518 0.2051105606018901 1.0 ['ZNF730|p.T279I|1|0.19|ENSG00000183850|chr19:23145880-23145880|C/T|missense_variant', 'ENSG00000213988|ENST00000418063|ZNF90'] 19351 6208 ELLKKGGL True PC9_epitope_Rep4 856.5382031721999 856.53710993586 30.921 2 -0.67418286418014 0.20512271580396055 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'ENST00000482899.1_1_7:150737654-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 56842 7229 LDPAVMDQFY True H1975_Epitope_Rep3 1197.5376111188498 1197.53650993586 32.778 2 -0.6742005869879978 0.20513487063428956 1.0 ['ENSG00000123505|ENST00000368885|AMD1', 'nc|ENSG00000123505|P17707-2|AMD1'] 117831 15693 TVYDRTTVL True PC9_epitope_Rep3 1066.5658744720201 1066.56476993586 65.505 2 -0.6742187446528217 0.20514702509289418 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 44803 18155 IMSPEIQLPLP True PC9_epitope_Rep1 1236.67879604928 1236.6776899358601 74.624 2 -0.6742686661912509 0.20515604214131714 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 102139 18216 SLRQISYWHKK True PC9_epitope_Rep3 1444.7939173442398 1444.79227490379 75.28 3 -0.674271963395534 0.20515604214131714 1.0 ['ENST00000376052.4_2_13:103266461-103266512:+|nuORF'] 35986 12194 GTVLDQVP True PC9_epitope_Rep3 827.4388830537499 827.43778993586 51.936 2 -0.6743050163427352 0.2051834862385321 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A', 'ENSG00000106723|ENST00000375859|SPIN1'] 93992 14397 RRKKLTQYKF True H1975_Epitope_Rep1 1366.8197381692596 1366.81864993586 60.574 2 -0.6743132738040295 0.20519563921040962 1.0 ['IGFBP5|p.S163Y|1|0.23|ENSG00000115461|chr2:216678929-216678929|G/T|missense_variant'] 128596 19917 VPTRARVF True PC9_epitope_Rep3 944.5555845718399 944.55448993586 81.851 2 -0.67434215065469 0.20521994403926425 1.0 ['ENST00000534270.1_1_8:145742254-145742921:-|nuORF'] 47089 11650 ITTFKMLLLC True H1975_Epitope_Rep3 1181.65522415373 1181.65412993586 49.946 2 -0.6743607857380073 0.20521994403926425 1.0 ['CHRM3|p.R552I|1|0.22|ENSG00000133019|chr1:239909106-239909106|G/T|missense_variant'] 136193 6672 WRRWCWRWPWR True H1975_Epitope_Rep1 1772.8735221609597 1772.87242993586 30.716 2 -0.6744064911492679 0.20522582026113811 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 132442 19645 VVAVRHLGRWC True NCI_RA007_Epitope_Rep5 1294.7080795452998 1294.70698993586 82.478 2 -0.6744824689097005 0.20522582026113811 1.0 ['ENST00000549824.1_1_12:53142751-53143132:+|nuORF'] 60247 13536 LGRAGGLVGWG True PC9_epitope_Rep5 1041.5719629119699 1041.5708699358602 57.088 2 -0.6745150335825588 0.20522582026113811 1.0 ['ENST00000506530.5_1_4:1323389-1323932:+|nuORF'] 99547 12582 SIEAEVDPPSD True H1975_Epitope_Rep2 1157.5088130883698 1157.50770993586 53.492 2 -0.6745562231654234 0.20522855832441522 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 138538 9787 YHVRREDLGK True NCI_RA007_Epitope_Rep2 1271.67346785839 1271.6718149037902 42.692 3 -0.6745970407860682 0.20522855832441522 1.0 ['nc|ENSG00000188877|Q6S8J7-2|POTEA', 'nc|ENSG00000188877|Q6S8J7|POTEA'] 3340 14628 AGGLRDRQEP True PC9_epitope_Rep1 1097.55776939981 1097.55666993586 61.089 2 -0.6746174289593521 0.20522855832441522 1.0 ['ENST00000367602.7_1_1:180167664-180168105:+|nuORF'] 58762 10706 LESEWCLIPTV True NCI_RA007_Epitope_Rep3 1288.6373251601199 1288.63622993586 49.157 2 -0.6746206740393885 0.20522855832441522 1.0 ['ENST00000439384.5_3_7:29186332-29186525:+|nuORF'] 75304 15069 NILDIVRPP True PC9_epitope_Rep4 1035.6076797143498 1035.60658993586 65.895 2 -0.6746726748754881 0.20525599669780312 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 6453 16956 APSFAPSSSV True PC9_epitope_Rep3 948.45526139388 948.45416993586 70.382 2 -0.6747320030699328 0.20526814651745856 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 14784 5908 DVPGPTALAP True H1975_Epitope_Rep2 936.4916469025999 936.49054993586 27.711 2 -0.6747737120627088 0.20528930673392953 1.0 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 2898 4804 AEWCEFTP True H1975_Epitope_Rep1 981.3902186091699 981.38912993586 23.547 2 -0.6747887265033059 0.20528930673392953 1.0 ['ENSG00000168907|ENST00000397272|PLA2G4F', 'nc|ENSG00000168907|Q68DD2-3|PLA2G4F'] 59050 15496 LEVSGLWSL True PC9_epitope_Rep1 1002.53859709502 1002.53750993586 64.427 2 -0.6748114527675261 0.20528930673392953 1.0 ['nc|ENSG00000181982|Q6ZUS6|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-5|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-4|CCDC149', 'ENSG00000181982|ENST00000635206|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-6|CCDC149'] 94427 13271 RRRRRDWFWR True PC9_epitope_Rep3 1588.8712136618396 1588.86901987172 56.082 4 -0.6749150081005417 0.20531046500963038 1.0 ['ENST00000361972.8_1_10:7212945-7217999:-|nuORF'] 67134 8260 LSQNGLAA True H1975_Epitope_Rep2 772.40791727864 772.40682993586 36.724 2 -0.6749280606509948 0.20531046500963038 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1'] 122214 8136 VGAPGYSR True PC9_epitope_Rep4 805.40825163181 805.40714993586 38.748 2 -0.6749281570378591 0.20531046500963038 1.0 ['ENSG00000112293|ENST00000230036|GPLD1'] 78733 7498 PAAARPLPAA True PC9_epitope_Rep5 933.5396001545298 933.53850993586 33.791 2 -0.6749393856132541 0.2053226126966172 1.0 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 37416 13635 GVTELRLLY True H1975_Epitope_Rep1 1062.60734536118 1062.6062499358602 57.579 2 -0.6749809829701294 0.20533476001222867 1.0 ['ENST00000455517.5_2_3:12330435-12330558:+|nuORF'] 41791 9429 IARSIARAL True PC9_epitope_Rep6 969.6083484206898 969.60724993586 46.494 2 -0.6751087350392736 0.20540177001971785 1.0 ['SAFB2-LONP1|1|fusion', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5696605-5708411:-|nuORF', 'nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'LONP1|p.M552Hfs*3|1|0.14|ENSG00000196365|chr19:5699059-5699060|-/C|frameshift_variant'] 57914 12187 LEGERNHII True PC9_epitope_Rep3 1079.5723568347898 1079.5712499358601 51.912 2 -0.6751260660298466 0.20540177001971785 1.0 ['nc|ENSG00000289604|P0CG41|CTAGE8', 'nc|ENSG00000288784|Q8IX94|CTAGE4', 'ENSG00000236761|ENST00000314099|CTAGE9', 'CTAGE15|p.S477Yfs*6|1|0.06|ENSG00000271079|chr7:143573245-143573246|-/TATTCGGT|frameshift_variant', 'ENSG00000271321|ENST00000470691|CTAGE6', 'ENSG00000271079|ENST00000420911|CTAGE15'] 56330 7484 LDCIPECP True NCI_RA007_Epitope_Rep4 888.37212601688 888.37102993586 35.432 2 -0.675134719809001 0.20540177001971785 1.0 ['ENSG00000102104|ENST00000379984|RS1'] 84798 8956 QDYLLLINCQ True H1975_Epitope_Rep3 1221.60635938501 1221.6052699358602 39.444 2 -0.6751716387799248 0.2054076361079693 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 39609 6913 HLLDLEEAGDM True H1975_Epitope_Rep1 1241.55980311541 1241.5587099358602 31.633 2 -0.6752150947141617 0.2054076361079693 1.0 ['nc|ENSG00000116132|P54821-2|PRRX1', 'ENSG00000116132|ENST00000239461|PRRX1'] 95136 12226 RVFRALLVQWD True H1975_Epitope_Rep1 1401.7881036878098 1401.7870099358602 52.048 2 -0.6752393812391287 0.2054076361079693 1.0 ['ENST00000327097.4_1_2:119739014-119739962:+|nuORF'] 16204 9208 EEEELERILR True H1975_Epitope_Rep1 1314.67794410214 1314.6768499358602 40.326 2 -0.6752542658540172 0.2054099488041568 1.0 ['nc|ENSG00000198720|Q86YJ7-2|ANKRD13B', 'ENST00000487527.5_1_17:27916841-27940597:+|nuORF', 'ENSG00000198720|ENST00000394859|ANKRD13B'] 70621 24627 LWHIWRERN True NCI_RA007_Epitope_Rep2 1308.68397297244 1308.68233490379 103.53 3 -0.6752816633529959 0.2054099488041568 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 20229 11283 ENLLKSLQAPE True H1975_Epitope_Rep1 1240.66631678928 1240.66520993586 48.377 2 -0.6752853440270994 0.2054099488041568 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 61392 24724 LITLLELTVE True PC9_epitope_Rep4 1142.6798415951 1142.6787499358602 103.6 2 -0.6753198997877702 0.2054099488041568 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 98589 8124 SFSELYTLS True NCI_RA007_Epitope_Rep1 1045.49679185269 1045.4956899358601 35.598 2 -0.6753200083541808 0.2054099488041568 1.0 ['ENSG00000213445|ENST00000534313|SIPA1'] 85540 19329 QGCDIIPLAKL True PC9_epitope_Rep4 1169.6478302741698 1169.64672993586 82.456 2 -0.6753387156783991 0.2054099488041568 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 13322 11963 DLVDRTRSWLY True H1975_Epitope_Rep2 1422.7255630009 1422.72446993586 51.094 2 -0.6753438356543014 0.2054099488041568 1.0 ['ENST00000504260.5_1_17:47783523-47784713:-|nuORF', 'ENST00000508607.1_1_17:47783523-47785148:-|nuORF'] 5684 13737 APAGPALGL True PC9_epitope_Rep2 765.43848913093 765.43738993586 58.127 2 -0.6753496180607218 0.2054099488041568 1.0 ['ENSG00000074356|ENST00000389005|NCBP3'] 29683 22721 FVLLMALVV True PC9_epitope_Rep2 1003.6140109647498 1003.61290993586 92.892 2 -0.6753695517999504 0.2054099488041568 1.0 ['ENSG00000147873|ENST00000610521|IFNA5'] 13542 5505 DNYNEEVADLK True NCI_RA007_Epitope_Rep2 1308.5833750109598 1308.58226993586 26.029 2 -0.6754984165503531 0.2054373739226114 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'nc|ENSG00000112249|Q8N3C0-4|ASCC3', 'ENST00000468245.2_1_6:101296020-101315873:-|nuORF', 'nc|ENSG00000112249|Q8N3C0-3|ASCC3'] 92655 21969 RNLHFIRLL True PC9_epitope_Rep6 1180.719295852 1180.7181899358602 97.423 2 -0.6755401493186236 0.20548008007702065 1.0 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|16|1|sense'] 129791 26155 VRRKGLGK True PC9_epitope_Rep5 912.5981180901598 912.5975649679301 106.31 1 -0.6755904293604469 0.20548552219420887 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 89218 8155 QVTSLLQLVHS True NCI_RA007_Epitope_Rep2 1223.6873865870298 1223.68628993586 36.357 2 -0.6756110711693899 0.20548552219420887 1.0 ['nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2'] 20276 6710 ENQNLSQVS True PC9_epitope_Rep1 1017.47270236317 1017.47160993586 30.613 2 -0.6756177517030842 0.20548552219420887 1.0 ['nc|ENSG00000215695|Q92681|RSC1A1'] 121037 13941 VEQLDGSLE True PC9_epitope_Rep3 988.4713053808399 988.47020993586 58.7 2 -0.6756323844502755 0.20548552219420887 1.0 ['SATB2|p.P166Lfs*14|1|0.19|ENSG00000119042|chr2:199380464-199380464|G/-|frameshift_variant', 'SATB2|p.L538Sfs*8|1|0.27|ENSG00000119042|chr2:199308888-199308888|G/-|frameshift_variant', 'nc|ENSG00000119042|Q9UPW6-2|SATB2', 'ENSG00000119042|ENST00000417098|SATB2'] 69136 9325 LTRNSFALV True PC9_epitope_Rep3 1019.5763795860698 1019.57528993586 40.81 2 -0.6756408156659709 0.20548552219420887 1.0 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 119100 9127 VAGRWQRPP True H1975_Epitope_Rep3 1065.5831963020098 1065.58208993586 40.097 2 -0.6756412290618246 0.20548552219420887 1.0 ['ENST00000464954.1_1_1:167691224-167691416:+|nuORF'] 73147 14684 MRRYEEDMYWR True H1975_Epitope_Rep1 1633.7129667952097 1633.71186993586 61.697 2 -0.6756786251108028 0.20548552219420887 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 116110 3748 TSSACNNNN True PC9_epitope_Rep2 923.3403082946301 923.33920993586 19.683 2 -0.6756885526417963 0.20548552219420887 1.0 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 46544 8260 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 38.451 2 -0.6757142196479141 0.20549766219478655 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 13599 21064 DPGLKEASGTV True PC9_epitope_Rep1 1072.540053647 1072.53894993586 85.854 2 -0.6757985292170764 0.20550980182437698 1.0 ['ENST00000343253.11_1_1:93645610-93648926:+|nuORF'] 70074 12363 LVNIWTISI True PC9_epitope_Rep6 1057.61718176889 1057.6160899358601 58.958 2 -0.6758103429117552 0.20553407997066417 1.0 ['ENSG00000109929|ENST00000264027|SC5D', 'SC5D|p.Y198F|1|0.04|ENSG00000109929|chr11:121307205-121307205|A/T|missense_variant', 'SC5D|p.H209R|1|0.4|ENSG00000109929|chr11:121307238-121307238|A/G|missense_variant'] 22476 6414 ETFGKIQESEK True H1975_Epitope_Rep3 1294.6404959642598 1294.6393899358602 29.648 2 -0.675824186919038 0.20553407997066417 1.0 ['ENSG00000174106|ENST00000308330|LEMD3'] 71491 6278 LYWTDWNRDNP True NCI_RA007_Epitope_Rep2 1478.6578773638998 1478.6562449037901 29.026 3 -0.6758702757103698 0.20554621848739496 1.0 ['nc|ENSG00000116962|P14543-2|NID1', 'ENSG00000116962|ENST00000264187|NID1'] 16072 9561 EEAAVEEQEEA True H1975_Epitope_Rep2 1232.50445598392 1232.5033499358601 41.75 2 -0.6759078355823159 0.20557949094020228 1.0 ['nc|ENSG00000118194|P45379-11|TNNT2', 'nc|ENSG00000118194|P45379-6|TNNT2'] 80755 12008 PHHFLHQLH True PC9_epitope_Rep4 1164.5940953388802 1164.59245490379 53.987 3 -0.675918204993454 0.20557949094020228 1.0 ['PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 142264 20128 YWYNYEILKKW True NCI_RA007_Epitope_Rep2 1604.8027506924395 1604.80164993586 83.299 2 -0.6759790409074392 0.20557949094020228 1.0 ['ENSG00000075303|ENST00000341119|SLC25A40'] 130864 6262 VTCSCLISRK True NCI_RA007_Epitope_Rep2 1108.57328543492 1108.57218993586 28.962 2 -0.6759810850799733 0.20557949094020228 1.0 ['ENST00000372715.6_1_9:131396210-131396525:-|nuORF'] 117745 12957 TVVGTADPSLP True PC9_epitope_Rep2 1055.54989005471 1055.5487899358602 55.131 2 -0.6760204888683424 0.2055916278359178 1.0 ['ENST00000596243.5_1_19:50382004-50382127:+|nuORF'] 20913 6218 EQLWVDQQK True H1975_Epitope_Rep3 1172.5825871653199 1172.5814899358602 28.93 2 -0.6761296600303978 0.2056343192373503 1.0 ['nc|ENSG00000132436|Q6PIW4-2|FIGNL1', 'ENSG00000132436|ENST00000433017|FIGNL1', 'FIGNL1|p.P568Qfs*9|1|0.13|ENSG00000132436|chr7:50445585-50445585|G/-|frameshift_variant'] 80982 21660 PIHLPKDIL True PC9_epitope_Rep5 1044.6331661862 1044.63206993586 88.362 2 -0.6762143258476216 0.2056770093343722 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|2.1672232902095696|0.3234029913481031|2.74|541.0|52|3|anti-sense'] 28623 16070 FSIFCSPKLML True PC9_epitope_Rep5 1284.6610378101598 1284.65938490379 66.802 3 -0.6763278524606487 0.20568914418405695 1.0 ['ENST00000254950.12_1_16:69358252-69358534:+|nuORF'] 136223 19480 WRSRRRRRP True H1975_Epitope_Rep2 1324.7813360282798 1324.78022993586 80.834 2 -0.6763387905400562 0.20570127866297988 1.0 ['ENST00000389561.6_1_12:132551999-132562003:+|nuORF'] 13157 16660 DLRLPPVVP True PC9_epitope_Rep6 1004.6018660579199 1004.60076993586 76.552 2 -0.6763896686914291 0.2057439657806294 1.0 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'MYO18A|p.A484Gfs*3|1|0.27|ENSG00000196535|chr17:29121132-29121132|G/-|frameshift_variant'] 102358 11871 SLSWKFFPYQK True H1975_Epitope_Rep3 1429.73942215989 1429.73832993586 50.811 2 -0.6764332314869161 0.20581720413681429 1.0 ['SOWAHB|p.K729Qfs*26|1|0.5|ENSG00000186212|chr4:76895666-76895667|-/C|frameshift_variant'] 135568 20449 WKWFKHIIRFI True NCI_RA007_Epitope_Rep3 1572.9081592508398 1572.90652490379 89.093 3 -0.6764646456003404 0.20584461214139502 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 68744 10623 LTLDQAARP True PC9_epitope_Rep3 983.5399940773499 983.53888993586 45.81 2 -0.6764714536321368 0.2058504544413045 1.0 ['ENSG00000034971|ENST00000037502|MYOC', 'MYOC|p.Q101L|1|0.59|ENSG00000034971|chr1:171652310-171652310|T/A|missense_variant'] 96998 3895 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 20.082 2 -0.6764854229397491 0.2058504544413045 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 4936 16577 ALGDGVVAAL True PC9_epitope_Rep3 884.4967322830399 884.49562993586 68.902 2 -0.6764938606241533 0.2058504544413045 1.0 ['NLRP5|p.G1081V|1|0.48|ENSG00000171487|chr19:56053751-56053751|G/T|missense_variant'] 1284 10729 AEDPAVYGV True H1975_Epitope_Rep2 919.42871229287 919.42816496793 46.296 1 -0.6766404076360615 0.20585584897591375 1.0 ['KTI12|p.D51V|1|0.45|ENSG00000198841|chr1:52033610-52033610|T/A|missense_variant'] 81776 6887 PLPMTPVP True H1975_Epitope_Rep3 850.4622613506199 850.46116993586 31.451 2 -0.6767176938445002 0.20585584897591375 1.0 ['nc|ENSG00000159374|Q8TC57-3|M1AP', 'ENST00000464686.5_1_2:74785845-74804048:-|nuORF', 'nc|ENSG00000159374|Q8TC57-4|M1AP', 'ENSG00000159374|ENST00000421985|M1AP'] 31537 4329 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 21.768 2 -0.676751529058265 0.20585584897591375 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 22984 15307 EVEVIGGA True PC9_epitope_Rep5 772.3966838885998 772.39613496793 63.888 1 -0.6767875900479611 0.20585584897591375 1.0 ['ENSG00000167900|ENST00000301634|TK1'] 3307 5440 AGGDLHFP True NCI_RA007_Epitope_Rep4 812.3817025308 812.38060993586 27.503 2 -0.6768021060028909 0.20585584897591375 1.0 ['nc|ENSG00000167889|Q3V5L5-5|MGAT5B', 'ENSG00000167889|ENST00000569840|MGAT5B', 'nc|ENSG00000167889|Q3V5L5-2|MGAT5B', 'ENST00000374998.3_1_17:74865111-74909907:+|nuORF'] 63484 21201 LLWRLWEERER True H1975_Epitope_Rep3 1584.8524948495199 1584.8513899358602 88.551 2 -0.6768508910855635 0.20585584897591375 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF'] 141732 5056 YTWRWVWSWEW True NCI_RA007_Epitope_Rep3 1683.7622828627896 1683.76063490379 26.882 3 -0.6768544666037757 0.20585584897591375 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 136533 20742 WWDIYYTLFEK True PC9_epitope_Rep2 1562.7445671099797 1562.74346993586 85.224 2 -0.6768613672596642 0.20585584897591375 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 62427 5820 LLHGFGGG True NCI_RA007_Epitope_Rep4 756.39187329168 756.39076993586 29.012 2 -0.6768787966482752 0.20588325136695482 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 102453 18332 SLTVPWITG True PC9_epitope_Rep4 972.5280324113199 972.52692993586 78.582 2 -0.6769257572312221 0.20590436336423476 1.0 ['HDX|p.N421S|1|0.15|ENSG00000165259|chrX:84440575-84440575|T/C|missense_variant'] 108862 2706 TAADQEKNP True NCI_RA007_Epitope_Rep2 972.4512386426 972.4501499358599 14.753 2 -0.6769307206279859 0.20590436336423476 1.0 ['ENSG00000213190|ENST00000368921|MLLT11'] 81619 13046 PLLFDKLYL True PC9_epitope_Rep2 1120.6532329244399 1120.65212993586 55.461 2 -0.6769417757887993 0.20590436336423476 1.0 ['ENSG00000068654|ENST00000263857|POLR1A', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF'] 11336 10199 DEMIGKIIK True PC9_epitope_Rep5 1045.58416738845 1045.58306993586 44.22 2 -0.6769657999993228 0.20590705700890335 1.0 ['ENSG00000216937|ENST00000639629|CCDC7', 'nc|ENSG00000216937|Q96M83-2|CCDC7', 'nc|ENSG00000216937|Q96M83-4|CCDC7', 'nc|ENSG00000216937|Q96M83-3|CCDC7', 'nc|ENSG00000216937|Q96M83-5|CCDC7'] 39289 9069 HINTLARELLI True NCI_RA007_Epitope_Rep2 1291.76122023363 1291.75957490379 39.88 3 -0.6769846676838066 0.20590705700890335 1.0 ['ENST00000571240.1_1_17:7946036-7951880:+|nuORF', 'nc|ENSG00000179593|O15296-3|ALOX15B', 'ENSG00000179593|ENST00000380183|ALOX15B'] 94350 24559 RRRLLPRGAL True H1975_Epitope_Rep3 1206.7785420636199 1206.77689490379 102.2 3 -0.6770139454484138 0.20590705700890335 1.0 ['ENST00000252599.8_2_19:17666455-17670143:+|nuORF'] 123561 15293 VGPQYQAV True PC9_epitope_Rep5 860.4392174069199 860.4386649679301 63.834 1 -0.6770606825671764 0.20590705700890335 1.0 ['ENSG00000089902|ENST00000262241|RCOR1'] 58966 8207 LETWDNISWHK True NCI_RA007_Epitope_Rep1 1427.68336383575 1427.68171490379 35.922 3 -0.6771332644842423 0.20594658155551823 1.0 ['NLRP13|p.P198H|1|0.07|ENSG00000173572|chr19:55913224-55913224|G/T|missense_variant'] 109232 25092 TARKSTGG True PC9_epitope_Rep1 776.4140652882398 776.41351496793 101.41 1 -0.6771444130273987 0.20594658155551823 1.0 ['ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000586518.1_1_17:73775126-73775255:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 42557 12050 IEETITTVV True PC9_epitope_Rep3 1003.54374204511 1003.54264993586 51.388 2 -0.6771927979131416 0.20597397837639728 1.0 ['nc|ENSG00000154358|Q5VST9-3|OBSCN'] 74182 9204 NEEKNFHLQPD True H1975_Epitope_Rep1 1369.6262428824498 1369.62514993586 40.31 2 -0.6772017479922572 0.20598610368786746 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 101079 6538 SLGGLHSV True PC9_epitope_Rep3 768.41300265908 768.41190993586 30.175 2 -0.6772972409957501 0.2060134990685032 1.0 ['ENSG00000205922|ENST00000382349|ONECUT3'] 112661 14092 TLFPQPHCLP True PC9_epitope_Rep2 1151.57975071435 1151.57864993586 59.478 2 -0.6773406307490494 0.20601933149078472 1.0 ['nc|ENSG00000071564|P15923-3|TCF3'] 116386 4268 TTHRVETPP True H1975_Epitope_Rep2 1036.53015766964 1036.5290699358602 21.53 2 -0.6773407737904826 0.20601933149078472 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-1|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-2|TNRC6C', 'ENST00000591851.5_1_17:76047306-76073478:+|nuORF'] 58979 5737 LEVDSAKEGNP True NCI_RA007_Epitope_Rep1 1157.5564319871298 1157.55532993586 26.373 2 -0.6773551065936523 0.20601933149078472 1.0 ['ARHGAP30|p.C874S|1|0.29|ENSG00000186517|chr1:161048400-161048400|C/G|missense_variant'] 116107 12276 TSRRYHSL True PC9_epitope_Rep6 1018.53082637598 1018.52972993586 58.604 2 -0.6774115127857526 0.20604357850697042 1.0 ['nc|ENSG00000182606|Q9UPV9-2|TRAK1', 'ENSG00000182606|ENST00000327628|TRAK1', 'nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 92037 12303 RKRWHRWQDHH True H1975_Epitope_Rep3 1640.82974277268 1640.82864993586 52.504 2 -0.6774362484608178 0.20604357850697042 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 38737 8409 HGIVGTIV True NCI_RA007_Epitope_Rep1 794.46503823194 794.46394993586 36.711 2 -0.6774870438774181 0.20605570145972027 1.0 ['ENSG00000131435|ENST00000253754|PDLIM4'] 92038 12394 RKRWHRWQDHH True H1975_Epitope_Rep3 1640.82974277268 1640.82864993586 52.862 2 -0.677497076028521 0.20607994625461876 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 97372 12106 SEDLWLECV True H1975_Epitope_Rep2 1092.47976188956 1092.4786699358601 51.649 2 -0.6775075194245886 0.20607994625461876 1.0 ['ENSG00000137040|ENST00000259569|RANBP6'] 112013 11441 TIRVLRAL True PC9_epitope_Rep2 940.6181848283999 940.61708993586 49.328 2 -0.6775738194216018 0.20610733643789603 1.0 ['SCN1A|p.F218I|1|0.21|ENSG00000144285|chr2:166052894-166052894|A/T|missense_variant'] 73750 10441 NADPLNEKEK True H1975_Epitope_Rep3 1156.57241640444 1156.5713099358602 45.221 2 -0.6776453683438278 0.20613157854558223 1.0 ['ENST00000583470.1_1_17:30439414-30439573:-|nuORF'] 19967 9325 ELVVNYDAP True PC9_epitope_Rep3 1018.4971262058599 1018.49602993586 40.81 2 -0.67766224539517 0.20613157854558223 1.0 ['ENSG00000185163|ENST00000397333|DDX51'] 119452 12957 VARHCLERTE True NCI_RA007_Epitope_Rep3 1212.60333969324 1212.60169490379 58.24 3 -0.677709242504457 0.20613740458015267 1.0 ['ENST00000284110.1_1_17:13504854-13504956:-|nuORF'] 40897 7092 HSLMAMSL True PC9_epitope_Rep4 888.4197449156401 888.41864993586 34.547 2 -0.6777141122540074 0.20613740458015267 1.0 ['ENSG00000101298|ENST00000381867|SNPH'] 129109 9128 VQQHRKYYQDK True NCI_RA007_Epitope_Rep2 1491.7582601115098 1491.75716993586 40.111 2 -0.6777299573402001 0.20613740458015267 1.0 ['ENST00000453368.1_1_2:26799001-26801669:+|nuORF', 'ENST00000479453.1_1_2:26798863-26800497:+|nuORF', 'ENSG00000173557|ENST00000329615|FAM166C'] 9151 16665 AVLDRNVAI True PC9_epitope_Rep1 969.5607295219299 969.55962993586 68.93 2 -0.6777951798807534 0.20616746813220366 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 102606 6290 SLWHQRQP True NCI_RA007_Epitope_Rep4 1050.53591175642 1050.53480993586 30.799 2 -0.6778020664012113 0.20616746813220366 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 119449 17549 VARCYTYSWSQ True PC9_epitope_Rep1 1362.6026709869 1362.6015699358602 72.295 2 -0.6778172483325052 0.20616746813220366 1.0 ['ENSG00000141506|ENST00000447110|PIK3R5', 'ENST00000578515.5_1_17:8785060-8814811:-|nuORF'] 67769 15079 LSYRKISV True PC9_epitope_Rep1 964.5705659296399 964.56946993586 62.82 2 -0.6778278369794503 0.20616746813220366 1.0 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant'] 45831 14126 ISDHYPVEV True PC9_epitope_Rep4 1057.50802524273 1057.5069299358602 62.24 2 -0.6778315937910612 0.20616746813220366 1.0 ['ENSG00000013563|ENST00000369807|DNASE1L1', 'ENSG00000213918|ENST00000246949|DNASE1'] 131701 24535 VTNNVIRLKP True PC9_epitope_Rep4 1152.69789170108 1152.69737496793 102.86 1 -0.6778391802928698 0.20617958660275396 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 15754 8159 ECTCTPFLVL True PC9_epitope_Rep5 1124.5246039069998 1124.5229549037902 36.324 3 -0.6778643616745734 0.20620697024745446 1.0 ['ENST00000355947.6_1_7:99489832-99489904:-|nuORF'] 74054 8157 NDLKKYDVP True H1975_Epitope_Rep3 1090.56587447202 1090.56476993586 36.355 2 -0.6778831079640594 0.20621279194016182 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47655184-47666418:-|nuORF'] 68789 14035 LTLLNRHKNIH True H1975_Epitope_Rep1 1357.7942516974101 1357.7931499358601 59.149 2 -0.6778852079265423 0.20621279194016182 1.0 ['ENSG00000197782|ENST00000683561|ZNF780A', 'nc|ENSG00000197782|O75290-3|ZNF780A'] 123658 10496 VGQPAVAGLS True PC9_epitope_Rep3 897.4919812557699 897.4914349679301 45.312 1 -0.6779571346129588 0.20621279194016182 1.0 ['ENST00000470411.2_1_16:624643-626255:+|nuORF'] 10021 19396 AYRLTPKLM True PC9_epitope_Rep3 1091.6161362230698 1091.61502993586 79.83 2 -0.6780565857330284 0.20624017340599288 1.0 ['ENSG00000147677|ENST00000521861|EIF3H'] 79315 19445 PARDCREVDP True PC9_epitope_Rep1 1156.5295060466399 1156.52840993586 79.609 2 -0.6781577309686729 0.20626440553783218 1.0 ['ENST00000358625.3_1_9:137023121-137023325:+|nuORF'] 139223 19733 YLFQIINGI True PC9_epitope_Rep4 1079.60153170475 1079.6004299358601 84.027 2 -0.6781721962289029 0.20626440553783218 1.0 ['nc|ENSG00000138769|Q92772|CDKL2', 'ENSG00000138769|ENST00000307465|CDKL2'] 127030 14691 VLSHLCCLP True PC9_epitope_Rep3 983.49324420907 983.49214993586 61.646 2 -0.678289490597648 0.20635284061421985 1.0 ['ENST00000321599.8_2_3:49785594-49823893:-|nuORF', 'ENST00000395238.5_2_3:49775836-49823893:-|nuORF'] 42353 7536 IEAQELAR True PC9_epitope_Rep2 928.4977949121999 928.49668993586 34.354 2 -0.6783279828210841 0.2063555053573064 1.0 ['nc|ENSG00000163681|Q14BN4-5|SLMAP', 'nc|ENSG00000163681|Q14BN4-4|SLMAP', 'nc|ENSG00000163681|Q14BN4-2|SLMAP', 'nc|ENSG00000163681|Q14BN4-3|SLMAP', 'nc|ENSG00000163681|Q14BN4|SLMAP', 'ENSG00000163681|ENST00000671191|SLMAP'] 120747 11505 VEKREGYPLRP True NCI_RA007_Epitope_Rep1 1342.7357337617798 1342.73462993586 48.718 2 -0.6783938817379763 0.2063555053573064 1.0 ['nc|ENSG00000088298|Q9BV94-2|EDEM2', 'ENSG00000088298|ENST00000374492|EDEM2'] 102271 18088 SLSLAHYGP True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 74.369 2 -0.6784129220695725 0.2063555053573064 1.0 ['ENST00000520316.5_1_8:28627126-28633440:-|nuORF'] 79023 16619 PALENTVSNRL True PC9_epitope_Rep3 1212.64625005104 1212.64459490379 69.06 3 -0.6784282056200319 0.2063555053573064 1.0 ['ENST00000565246.6_2_16:70254632-70255160:-|nuORF'] 69869 6153 LVHYMNVAK True NCI_RA007_Epitope_Rep1 1073.56918603065 1073.5680899358601 27.971 2 -0.6784532434968669 0.20636761855339672 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant', 'NEB|p.D1129Rfs*3|1|0.2|ENSG00000183091|chr2:151678058-151678059|-/T|frameshift_variant'] 62795 11213 LLLTVIVL True PC9_epitope_Rep4 882.6153908637399 882.61428993586 50.907 2 -0.678512244003234 0.20639499389499388 1.0 ['ENST00000550709.5_2_12:49717891-49718032:+|nuORF'] 90811 5710 RESTEFLQQNP True H1975_Epitope_Rep3 1347.6418929465897 1347.64024490379 26.992 3 -0.6785449658098611 0.20639765582076797 1.0 ['ENSG00000055130|ENST00000325222|CUL1'] 67693 19159 LSWKQQVL True PC9_epitope_Rep5 1000.5705659296399 1000.56946993586 78.732 2 -0.678609065572249 0.20639765582076797 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B', 'ENST00000595476.1_1_19:39869154-39871842:+|nuORF'] 91954 22508 RKNRRRRLGFN True PC9_epitope_Rep6 1471.8708793086696 1471.86922490379 99.58 3 -0.678639507241147 0.20639765582076797 1.0 ['ENST00000398645.6_1_11:66887311-66947572:+|nuORF'] 98467 10485 SFHSLSLDP True H1975_Epitope_Rep2 1001.4818104948899 1001.48070993586 45.348 2 -0.6786459750031887 0.20639765582076797 1.0 ['ENST00000543253.5_1_X:101969373-101969559:+|nuORF'] 63867 13600 LNMERNNRYQP True PC9_epitope_Rep1 1433.68338091909 1433.6822899358601 57.169 2 -0.6786975919529997 0.2064218783383695 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1'] 5673 7691 APAEVRLTPP True H1975_Epitope_Rep1 1049.58694426977 1049.58584993586 34.549 2 -0.678704784431968 0.2064218783383695 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'ENST00000473681.1_1_2:219559265-219561354:+|nuORF'] 80517 12185 PGPDPSLDRML True PC9_epitope_Rep5 1196.5859582935998 1196.58430490379 51.859 3 -0.6787154488943713 0.2064460993773654 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF', 'ENST00000490170.5_1_1:27674035-27676436:+|nuORF'] 60314 7215 LGSGHHHGPGP True PC9_epitope_Rep2 1051.49477522043 1051.49366993586 33.141 2 -0.6787266837844081 0.2064460993773654 1.0 ['ENSG00000105997|ENST00000612286|HOXA3'] 64220 21656 LPGTLTLVT True PC9_epitope_Rep2 913.54843350273 913.54788496793 88.775 1 -0.6788092038400322 0.20651925101863297 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF', 'ENST00000561695.1_1_16:2128976-2129273:+|nuORF'] 130678 5360 VSTLTPAL True H1975_Epitope_Rep1 800.4643695255999 800.46326993586 25.674 2 -0.6788770908936259 0.20656188005493667 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant'] 59122 9537 LEYLPPWDP True H1975_Epitope_Rep3 1128.54916177872 1128.5480699358602 41.692 2 -0.6789287170294916 0.20660450779020617 1.0 ['DSE|p.I440Tfs*45|1|0.55|ENSG00000111817|chr6:116435787-116435787|T/-|frameshift_variant', 'ENST00000436315.2_1_9:71224173-71224329:+|nuORF', 'ENST00000607094.1_1_6:116600797-116720830:+|nuORF', 'ENSG00000111817|ENST00000644252|DSE'] 59557 9388 LFTIDLYT True NCI_RA007_Epitope_Rep5 984.51679902128 984.51570993586 42.75 2 -0.6789745824974152 0.20666239394494293 1.0 ['ENSG00000100191|ENST00000266086|SLC5A4'] 58235 12997 LELKDGQQIPV True NCI_RA007_Epitope_Rep2 1238.68705223386 1238.6859499358602 55.18 2 -0.679038406085509 0.2066802978515625 1.0 ['ENST00000490251.1_1_7:43679183-43685017:-|nuORF', 'ENSG00000106603|ENST00000223336|COA1'] 10507 3678 CKMQPLSYK True NCI_RA007_Epitope_Rep2 1096.5409226774798 1096.53982993586 18.956 2 -0.6790404412900215 0.2066802978515625 1.0 ['L1MDa_dup2979|chr7:144182489-144183245:+|1.2545692982052257|0.1455468842828891|3.11|536.0|23|3|sense'] 95314 25631 RVRLLPLL True NCI_RA007_Epitope_Rep1 978.6702204012598 978.66912993586 106.08 2 -0.6790942652330761 0.2066802978515625 1.0 ['ENSG00000164326|ENST00000296777|CARTPT', 'nc|ENSG00000011478|Q9NXS2-3|QPCTL', 'ENSG00000011478|ENST00000012049|QPCTL'] 102242 12012 SLSGHNYL True H1975_Epitope_Rep2 889.42938099921 889.42828993586 51.284 2 -0.6791073878392088 0.2066802978515625 1.0 ['ENSG00000256797|ENST00000535540|KLRF2'] 59365 9995 LFLDHKTLYY True NCI_RA007_Epitope_Rep1 1311.6863239578702 1311.6852299358602 42.883 2 -0.679147576043622 0.20668294171498322 1.0 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000444292.2_1_X:95228575-95229244:-|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7'] 7620 5732 ASGEPVSVP True H1975_Epitope_Rep3 841.41814760917 841.41704993586 27.076 2 -0.6791602643371976 0.20668294171498322 1.0 ['ENSG00000196208|ENST00000381486|GREB1', 'GREB1|p.A908Gfs*4|1|0.13|ENSG00000196208|chr2:11610744-11610744|C/-|frameshift_variant', 'nc|ENSG00000196208|Q4ZG55-3|GREB1', 'nc|ENSG00000196208|Q4ZG55-2|GREB1'] 124624 9068 VGWKGCAP True PC9_epitope_Rep6 816.3952444199598 816.39414993586 44.944 2 -0.6791606823268307 0.20668294171498322 1.0 ['ENST00000482963.1_1_10:126234669-126305191:+|nuORF', 'ENST00000493240.1_1_10:126234573-126301926:+|nuORF'] 90034 25059 RDTKKTKRKKR True PC9_epitope_Rep5 1443.9110127851498 1443.90937490379 101.53 3 -0.6791634443775348 0.20668294171498322 1.0 ['nc|ENSG00000150776|Q6ZUT1-3|NKAPD1', 'nc|ENSG00000150776|Q6ZUT1|NKAPD1', 'ENSG00000150776|ENST00000393047|NKAPD1'] 60337 18417 LGSLQRRHF True PC9_epitope_Rep4 1112.6203100867199 1112.61920993586 78.909 2 -0.6792294233838775 0.2066887386906306 1.0 ['ENST00000529904.2_1_12:123942703-123943648:+|nuORF'] 978 10955 ADVWSFGVL True PC9_epitope_Rep5 992.4967322830398 992.49562993586 47.128 2 -0.6792513870394643 0.2066887386906306 1.0 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF'] 25914 16138 FFPQIRIRD True PC9_epitope_Rep1 1190.6560268890998 1190.65438490379 66.89 3 -0.6792608532394837 0.2066887386906306 1.0 ['ENST00000493299.1_1_3:184038318-184039070:+|nuORF'] 58955 12218 LETSRIISL True NCI_RA007_Epitope_Rep2 1030.60225998074 1030.60116993586 52.125 2 -0.6792872442255545 0.2067008421823508 1.0 ['ENST00000367306.5_1_1:201453677-201453818:-|nuORF'] 61247 18065 LINLTKLAP True PC9_epitope_Rep2 981.6222671493299 981.6211699358599 74.789 2 -0.6793033289312005 0.20671294530475245 1.0 ['CON__REFSEQ:XP_585019'] 73854 17087 NAPKALIV True PC9_epitope_Rep6 824.51198842436 824.51088993586 78.292 2 -0.6794033949235879 0.20672768878718537 1.0 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 48798 13791 KDNVYRKRRK True H1975_Epitope_Rep1 1361.8003997070098 1361.79930993586 58.19 2 -0.6794135416820746 0.20672768878718537 1.0 ['TPH1|p.C190Afs*32|1|0.11|ENSG00000129167|chr11:18029264-18029264|A/-|frameshift_variant', 'ENSG00000129167|ENST00000682019|TPH1', 'nc|ENSG00000129167|P17752-2|TPH1'] 126019 10739 VLDSRTIHIQW True NCI_RA007_Epitope_Rep1 1366.73573376178 1366.73462993586 45.766 2 -0.6794168270101882 0.20672768878718537 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant'] 112777 14656 TLHSLISEL True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 61.64 2 -0.6794295448999581 0.20672768878718537 1.0 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B'] 12913 18041 DLKIGYECLCP True PC9_epitope_Rep2 1252.58318141228 1252.58208993586 74.7 2 -0.6794351405538416 0.20672768878718537 1.0 ['LDLR-SMARCA4|3|fusion', 'LDLR-SMARCA4|4|fusion', 'nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'LDLR-SMARCA4|1|fusion', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'LDLR-SMARCA4|2|fusion', 'LDLR-SMARCA4|5|fusion', 'nc|ENSG00000130164|P01130-6|LDLR', 'nc|ENSG00000130164|P01130-4|LDLR'] 16303 12895 EEFWLFCPLRW True H1975_Epitope_Rep3 1524.7223921967598 1524.72128993586 54.826 2 -0.6795303741617535 0.20676714669270196 1.0 ['ENST00000335281.8_1_14:52434561-52434765:+|nuORF'] 41200 10484 HVIVVEEPS True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52766993586 47.175 2 -0.6795367634070588 0.20676714669270196 1.0 ['ZNF8|p.G557V|1|0.61|ENSG00000278129|chr19:58295478-58295478|G/T|missense_variant'] 64936 12044 LQEHQIVLVE True H1975_Epitope_Rep3 1206.66083748602 1206.6597499358602 51.488 2 -0.6795925286464228 0.20677293875371824 1.0 ['ENSG00000128626|ENST00000308018|MRPS12'] 120917 12803 VENSRPTLAI True PC9_epitope_Rep4 1098.6033226098998 1098.6022299358601 57.107 2 -0.6796027775441871 0.20677293875371824 1.0 ['ENST00000564835.1_1_16:67213303-67213837:-|nuORF', 'nc|ENSG00000196123|Q68EN5-2|MATCAP1', 'ENSG00000196123|ENST00000563902|MATCAP1'] 139313 15570 YLKLMPMF True NCI_RA007_Epitope_Rep4 1041.53913177233 1041.53802993586 67.639 2 -0.6796029885188634 0.20677293875371824 1.0 ['nc|ENSG00000100170|P13866-2|SLC5A1', 'ENSG00000100170|ENST00000266088|SLC5A1'] 66932 6121 LSNSTLIYF True H1975_Epitope_Rep2 1056.54916177872 1056.5480699358602 28.523 2 -0.679629980812667 0.20678188446695242 1.0 ['ENSG00000157399|ENST00000381134|ARSL'] 70693 23709 LWLLVWLVRFQ True PC9_epitope_Rep4 1471.8703767597897 1471.86926993586 99.554 2 -0.6796488340098432 0.20678188446695242 1.0 ['TRO|p.G1424Wfs*58|1|0.32|ENSG00000067445|chrX:54930991-54930992|-/T|frameshift_variant'] 58424 10007 LEPAPPSLGDP True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 43.82 2 -0.6796753597468995 0.20679398395314072 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1'] 82346 23512 PPLCFFLLLL True PC9_epitope_Rep6 1174.68242487774 1174.68132993586 103.57 2 -0.6797647595982053 0.20686709681355725 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000600281.1_1_19:12776145-12777515:-|nuORF', 'ENST00000466794.5_1_19:12769146-12777470:-|nuORF'] 117799 9437 TVWLDLLK True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 41.301 2 -0.6798026799366452 0.20687919463087248 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'ENST00000595380.5_1_13:98996033-99036984:+|nuORF', 'ENST00000601853.5_1_13:98996033-99030171:+|nuORF'] 102699 12037 SLYYHIRMSKM True PC9_epitope_Rep2 1427.70536223363 1427.70426993586 51.617 2 -0.6798663293889133 0.20688498085810594 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 8538 7494 ATTQANGGWP True PC9_epitope_Rep1 1001.4566583762098 1001.45556993586 33.645 2 -0.679874266503046 0.20688498085810594 1.0 ['ENSG00000091664|ENST00000263160|SLC17A6'] 93834 14013 RRCLRRWFHFW True H1975_Epitope_Rep1 1661.86262312409 1661.86152993586 59.062 2 -0.6798754639541954 0.20688498085810594 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4'] 98092 2730 SERRRPRRLRK True NCI_RA007_Epitope_Rep2 1508.9236431575198 1508.92145987172 14.845 4 -0.6799891738998404 0.2069244261419965 1.0 ['ENST00000320225.9_2_16:2314685-2318195:-|nuORF'] 55594 8200 LAIAIERYITM True NCI_RA007_Epitope_Rep1 1292.7162441871599 1292.7151499358602 35.894 2 -0.6800144259044678 0.2069244261419965 1.0 ['S1PR1|p.L174Wfs*62|1|0.17|ENSG00000170989|chr1:101239503-101239503|C/-|frameshift_variant', 'S1PR1|p.R233Pfs*4|1|0.33|ENSG00000170989|chr1:101239679-101239680|-/CC|frameshift_variant', 'ENSG00000170989|ENST00000305352|S1PR1'] 26145 13835 FGYPKFISHQD True PC9_epitope_Rep2 1337.6404363946099 1337.6393299358601 58.5 2 -0.6800691421310057 0.20696386901947625 1.0 ['nc|ENSG00000076604|Q9BUZ4-2|TRAF4', 'ENSG00000076604|ENST00000262395|TRAF4'] 104970 9994 SRDIRWEWKWP True NCI_RA007_Epitope_Rep1 1557.7840809365296 1557.78244490379 42.88 3 -0.6800793004393856 0.20696386901947625 1.0 ['ENST00000535164.5_1_16:19612936-19627472:+|nuORF'] 126726 25735 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 106.52 3 -0.6801356853572758 0.20697596388482187 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 55618 7896 LAILCQWFEFF True NCI_RA007_Epitope_Rep2 1415.69478046659 1415.6936899358602 35.345 2 -0.6801995620143518 0.20701540338569469 1.0 ['ENST00000324348.8_2_17:7818314-7818512:-|nuORF'] 56617 15540 LDIDPKLQEY True H1975_Epitope_Rep3 1232.6288686514 1232.6277699358602 65.192 2 -0.6802016513934828 0.20701540338569469 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 86279 16955 QIRPVLQI True PC9_epitope_Rep6 965.6022004110898 965.60110993586 77.762 2 -0.680258792174726 0.20702749691174452 1.0 ['CCDC40|p.S108Rfs*61|1|0.04|ENSG00000141519|chr17:80040038-80040039|-/CAGGC|frameshift_variant'] 7816 6366 ASVKTAFTRK True NCI_RA007_Epitope_Rep1 1107.64004247179 1107.6389499358602 28.79 2 -0.6803690051214046 0.20705484048069298 1.0 ['ENST00000462572.1_1_7:143479852-143480367:+|nuORF'] 102701 11431 SLYYHIRMSKM True PC9_epitope_Rep4 1427.70536223363 1427.70426993586 51.737 2 -0.6804145777098526 0.2070790252234117 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 12092 5340 DHVTVDSPY True NCI_RA007_Epitope_Rep2 1031.45598966987 1031.4548899358601 25.392 2 -0.680419657288233 0.2070790252234117 1.0 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 116643 5426 TVARSPVAP True PC9_epitope_Rep4 896.5079656730799 896.50686993586 27.604 2 -0.6804621580408681 0.20709111704155547 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 49032 12333 KEFSRERGLMT True H1975_Epitope_Rep3 1352.6870693171998 1352.6859699358602 52.622 2 -0.6805248217359163 0.20711845797242895 1.0 ['ENST00000567571.5_1_15:75080899-75085480:+|nuORF'] 60873 3763 LHYFQLKWHHR True NCI_RA007_Epitope_Rep2 1563.82113515159 1563.81893987172 19.277 4 -0.6805439728421804 0.20712368870456208 1.0 ['ENST00000423620.6_1_8:95718261-95718693:+|nuORF'] 49870 18753 KIEVLEQEL True PC9_epitope_Rep5 1099.61249031127 1099.6119749679299 77.146 1 -0.6805925541819313 0.20712368870456208 1.0 ['DSP|p.E1039Q|1|0.93|ENSG00000096696|chr6:7579305-7579305|G/C|missense_variant'] 130620 9618 VSSPAAGVPG True PC9_epitope_Rep5 840.4341320264799 840.43302993586 41.96 2 -0.6806174597015665 0.20712368870456208 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF', 'nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 74086 7763 NDPYHAYYRHK True H1975_Epitope_Rep3 1462.6741961343798 1462.67254490379 34.845 3 -0.6806191151651363 0.20712368870456208 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1', 'ENST00000463818.1_1_22:30742246-30752805:-|nuORF'] 126802 16988 VLPPSELLDH True NCI_RA007_Epitope_Rep2 1118.5971746003 1118.5960699358602 70.816 2 -0.6806254182542777 0.20712368870456208 1.0 ['ENSG00000160703|ENST00000409109|NLRX1', 'ENST00000481860.6_1_11:119043673-119051967:+|nuORF', 'nc|ENSG00000160703|Q86UT6-2|NLRX1'] 102289 8442 SLSLSTAGL True PC9_epitope_Rep5 847.46509780159 847.46400993586 37.415 2 -0.6806555101548336 0.20712368870456208 1.0 ['ADGRG4|p.V2200*|1|0.54|ENSG00000156920|chrX:136350301-136350301|G/-|frameshift_variant', 'nc|ENSG00000156920|Q8IZF6-2|ADGRG4', 'nc|ENSG00000156920|Q8IZF6-3|ADGRG4', 'ENSG00000156920|ENST00000394143|ADGRG4', 'ADGRG4|p.V1528Sfs*3|1|0.13|ENSG00000156920|chrX:136348281-136348282|-/A|frameshift_variant', 'ADGRG4|p.N1622Kfs*62|1|0.8|ENSG00000156920|chrX:136348564-136348565|-/C|frameshift_variant'] 92036 12411 RKRWHRWQDHH True H1975_Epitope_Rep1 1640.82974277268 1640.82864993586 52.773 2 -0.6806650094849133 0.20712368870456208 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 139391 6878 YLNIQRRTRL True NCI_RA007_Epitope_Rep4 1331.7786016332698 1331.77696490379 33.073 3 -0.680667924811302 0.20712368870456208 1.0 ['nc|ENSG00000101180|Q9Y5N1-3|HRH3', 'nc|ENSG00000101180|Q9Y5N1-7|HRH3', 'nc|ENSG00000101180|Q9Y5N1-4|HRH3', 'ENSG00000101180|ENST00000340177|HRH3', 'nc|ENSG00000101180|Q9Y5N1-2|HRH3'] 122978 13795 VGHVDEFLT True PC9_epitope_Rep4 1015.4974605590301 1015.49636993586 60.959 2 -0.6808122105443625 0.2072425097202104 1.0 ['ENSG00000142623|ENST00000375471|PADI1'] 7563 4318 ASELRKPIYWI True NCI_RA007_Epitope_Rep4 1374.7659712608997 1374.76432490379 22.953 3 -0.680877261063267 0.2073003384868722 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50'] 83975 6578 PVSFSPVDTN True PC9_epitope_Rep5 1061.5029398622898 1061.50184993586 30.272 2 -0.6808905440157137 0.20731242471831307 1.0 ['ENSG00000198400|ENST00000524377|NTRK1'] 96994 4083 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 20.605 2 -0.680960711313311 0.20740074403854364 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 33656 22838 GLGPLLLNL True PC9_epitope_Rep2 908.56950330048 908.56840993586 93.336 2 -0.6810072677194996 0.2074217499352045 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 12633 9555 DLASSSRLDR True PC9_epitope_Rep2 1118.5679997303398 1118.5669099358602 42.099 2 -0.6810087328325037 0.2074217499352045 1.0 ['ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2|TTLL8'] 137283 5339 YCRRWRYWEYW True PC9_epitope_Rep5 1765.7936000744096 1765.79194490379 25.548 3 -0.6810238187588762 0.2074217499352045 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 86273 20401 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 84.536 3 -0.6810429906158688 0.20744907915599464 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 13013 20360 DLNCVRERW True PC9_epitope_Rep3 1189.56622590853 1189.56512993586 83.563 2 -0.681082265108297 0.20746116201423934 1.0 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 106502 11526 STLKNLSL True PC9_epitope_Rep2 874.5123823471799 874.51128993586 49.662 2 -0.6810948891693703 0.20747324450407048 1.0 ['ENST00000531306.1_1_11:111933212-111933263:+|nuORF'] 25627 12183 FENLDQQLR True NCI_RA007_Epitope_Rep2 1161.5778361380499 1161.5767299358602 51.986 2 -0.6811572789541234 0.20750948976325137 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 82451 5665 PPPQVRRP True H1975_Epitope_Rep2 945.5508335445699 945.54972993586 26.788 2 -0.6811945594142863 0.20750948976325137 1.0 ['ENST00000468083.1_1_7:143078664-143079645:+|nuORF'] 57445 14397 LEAWRLQREAP True H1975_Epitope_Rep1 1367.7309827345098 1367.72988993586 60.574 2 -0.6811958792471173 0.20750948976325137 1.0 ['TRIOBP|p.G2086R|1|0.42|ENSG00000100106|chr22:37759196-37759196|G/C|missense_variant'] 92218 25247 RLIILPVFLIA True PC9_epitope_Rep1 1266.84276502962 1266.8411249037902 102.0 3 -0.6812136270925407 0.2075120806085273 1.0 ['ENST00000563259.5_1_16:71841998-71842112:-|nuORF', 'ENST00000566161.5_1_16:71841998-71842820:-|nuORF', 'ENST00000563104.5_1_16:71841998-71842661:-|nuORF'] 68855 16111 LTMLTC[Carbamidomethyl]LII True PC9_epitope_Rep4 1076.5973752038701 1076.5962699358602 69.908 2 -0.681222223433817 0.2075120806085273 1.0 ['ENSG00000001561|ENST00000321037|ENPP4'] 35402 7725 GSDFDC[Carbamidomethyl]ELR True NCI_RA007_Epitope_Rep2 1097.4447736425998 1097.44366993586 34.676 2 -0.6812314446420449 0.2075120806085273 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 11046 6306 DATVHEDKII True NCI_RA007_Epitope_Rep2 1139.5822528121498 1139.5811499358601 29.134 2 -0.6812379057962696 0.2075120806085273 1.0 ['ENSG00000016602|ENST00000370563|CLCA4'] 73721 6763 MYTGGVSSLAE True H1975_Epitope_Rep3 1113.50122561013 1113.50012993586 30.968 2 -0.6814084287674906 0.20762453508932383 1.0 ['nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 92173 23541 RLFRMLRIF True PC9_epitope_Rep1 1250.7434024248598 1250.74174490379 95.342 3 -0.6814508072480732 0.20762453508932383 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 125183 12021 VIIDDHPEV True PC9_epitope_Rep4 1035.52367530687 1035.52256993586 54.039 2 -0.6814646113684772 0.20762453508932383 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 138051 10651 YGDTLAAI True H1975_Epitope_Rep1 822.4123339527399 822.4117849679301 45.926 1 -0.681491429156998 0.20766709854431828 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 87413 21240 QPYGGFLDI True PC9_epitope_Rep4 1008.4916469025999 1008.4910749679301 89.865 1 -0.6815657875678167 0.20767917568515074 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 109871 6642 TEETATTVVA True H1975_Epitope_Rep2 1020.4975201286799 1020.49642993586 30.456 2 -0.6815915564800377 0.20770016308738132 1.0 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 33060 7754 GILPLVGMAMV True NCI_RA007_Epitope_Rep5 1099.61335934175 1099.61226993586 36.524 2 -0.6815984540701838 0.20770016308738132 1.0 ['ENST00000546847.5_1_12:49315769-49317670:-|nuORF', 'ENSG00000134285|ENST00000550765|FKBP11'] 83969 5232 PVSDRSPPP True PC9_epitope_Rep2 950.48214484806 950.48104993586 25.515 2 -0.6816168219948351 0.20770016308738132 1.0 ['ENST00000457226.2_3_9:2017114-2029019:+|nuORF'] 77168 21912 NRQQPPISL True PC9_epitope_Rep4 1051.57744221523 1051.5763499358602 92.495 2 -0.6816362933247595 0.20770907317370563 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7', 'BEND7|p.K242Sfs*24|1|0.08|ENSG00000165626|chr10:13481081-13481082|-/GTAGTAAACTGAC|frameshift_variant', 'nc|ENSG00000165626|Q8N7W2-2|BEND7', 'ENSG00000165626|ENST00000466271|BEND7'] 85524 14353 QGAGSVLF True PC9_epitope_Rep6 777.40210362221 777.40100993586 67.106 2 -0.6816449805676615 0.20770907317370563 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 136097 11541 WRLLKNYYKWR True NCI_RA007_Epitope_Rep2 1624.89905111912 1624.8979499358602 49.484 2 -0.681752425152461 0.20776370536326644 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 64328 10027 LPLAPHKPP True H1975_Epitope_Rep2 968.58073669052 968.57962993586 43.561 2 -0.681767080484573 0.20776370536326644 1.0 ['nc|ENSG00000130592|P33241-3|LSP1'] 82782 23823 PRPFKRRWLLF True PC9_epitope_Rep4 1514.8986571962998 1514.89702490379 100.05 3 -0.6817748590423884 0.2077757795592404 1.0 ['ENST00000603928.2_2_9:136890984-136891107:+|nuORF'] 36385 10285 GVFHRARG True NCI_RA007_Epitope_Rep4 898.4885676411799 898.4880149679301 46.417 1 -0.681800090467276 0.2077815200329183 1.0 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 23316 14859 EVQRFITL True PC9_epitope_Rep6 1004.5654805491998 1004.56438993586 69.13 2 -0.6818069043225978 0.2077815200329183 1.0 ['ENSG00000073067|ENST00000308919|CYP2W1'] 113706 4500 TLYQNAGP True NCI_RA007_Epitope_Rep5 862.4184819623398 862.41738993586 23.962 2 -0.681827024112496 0.2077815200329183 1.0 ['ENSG00000136738|ENST00000377524|STAM'] 44283 17783 ILCWLFWV True PC9_epitope_Rep6 1078.5673951254998 1078.5662899358601 81.037 2 -0.6818620743070797 0.2077935932213722 1.0 ['L1MC1_dup2138|chr3:11203375-11203979:-|1.7632556518554003|0.2278259033593264|2.95|541.0|26|1|anti-sense'] 41838 9697 IAVRVGATA True PC9_epitope_Rep5 856.5130510535199 856.51194993586 42.267 2 -0.6818927371928 0.20780249923803717 1.0 ['ENST00000233893.9_1_2:198364969-198365035:+|nuORF'] 5433 8124 ALTVDAHTV True PC9_epitope_Rep6 925.48689587533 925.48578993586 40.787 2 -0.6819340147826308 0.20780249923803717 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 87048 8635 QNEYEEFHFRR True NCI_RA007_Epitope_Rep2 1553.7011391582098 1553.70004993586 38.233 2 -0.6819823985502601 0.20782981057893052 1.0 ['ENST00000282030.5_1_18:42645023-42645323:+|nuORF'] 28565 6947 FSEVESILNQ True H1975_Epitope_Rep3 1164.5662683948399 1164.56516993586 31.683 2 -0.6820071920969966 0.2078418822955716 1.0 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 105419 24499 SRSSLKGL True PC9_epitope_Rep4 846.49231560894 846.4917649679301 102.72 1 -0.6820430665037095 0.20788443076360422 1.0 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 3175 7221 AGEAGPKYHDS True NCI_RA007_Epitope_Rep1 1130.4992514641801 1130.49814993586 32.077 2 -0.6821432818635317 0.2079238095238095 1.0 ['nc|ENSG00000079931|Q6UVY6-2|MOXD1', 'ENSG00000079931|ENST00000367963|MOXD1'] 79394 4054 PASRWGSRRRR True H1975_Epitope_Rep2 1383.7708309142297 1383.7691849037901 20.678 3 -0.6821751872473701 0.2079238095238095 1.0 ['ENST00000408011.7_1_18:24128932-24129277:-|nuORF'] 61246 9086 LINKLHSI True H1975_Epitope_Rep1 936.57565131008 936.57454993586 39.853 2 -0.6822059997938603 0.20793271062215246 1.0 ['nc|ENSG00000141524|Q7Z403-2|TMC6', 'ENSG00000141524|ENST00000590602|TMC6', 'nc|ENSG00000141524|Q7Z403-3|TMC6'] 19969 9622 ELVWTEEGP True PC9_epitope_Rep1 1058.49204082542 1058.49094993586 41.866 2 -0.6822273397660972 0.20793271062215246 1.0 ['ENST00000373950.6_1_20:34700355-34709591:+|nuORF'] 65929 14320 LSDRWAPP True H1975_Epitope_Rep2 940.4766655447999 940.47556993586 60.23 2 -0.6822753264849519 0.20794477966721522 1.0 ['ENST00000573441.1_1_17:79096339-79098810:-|nuORF'] 99943 13936 SINPQKDETL True PC9_epitope_Rep2 1143.57716743171 1143.57606993586 58.883 2 -0.682331511340073 0.20797208551097837 1.0 ['ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104242584-104242881:-|nuORF'] 79424 7349 PATRATPPS True PC9_epitope_Rep1 896.4715801643599 896.47048993586 33.079 2 -0.6823730949029311 0.20798415358829803 1.0 ['ENSG00000132326|ENST00000254657|PER2'] 107447 9509 SVLSVGSTGL True PC9_epitope_Rep2 918.5022115863 918.50110993586 41.925 2 -0.6824038074489117 0.2079962212978623 1.0 ['ENSG00000100926|ENST00000261789|TM9SF1'] 79294 18742 PAPVILAAP True PC9_epitope_Rep2 847.51673945163 847.51564993586 77.466 2 -0.6824995947824057 0.2080387615797172 1.0 ['ENST00000377680.3_1_9:38621281-38621927:+|nuORF', 'ENST00000484285.2_1_9:38620779-38621927:+|nuORF'] 129776 23421 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 103.19 3 -0.6825494400248402 0.20804131878846974 1.0 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 109577 6225 TDVVPEVESP True NCI_RA007_Epitope_Rep3 1070.5131701928199 1070.5120699358602 31.491 2 -0.6825688378556803 0.20804131878846974 1.0 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4'] 96999 3981 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 20.42 2 -0.6825758730819832 0.20804131878846974 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 7452 8777 ASALGKQLN True PC9_epitope_Rep1 900.50288029264 900.50178993586 38.601 2 -0.6825771535001527 0.20804131878846974 1.0 ['CON__P15497'] 82644 5374 PQLKPEER True NCI_RA007_Epitope_Rep1 995.5399940773499 995.53888993586 24.983 2 -0.6826122227019891 0.20811432576138458 1.0 ['ENSG00000187720|ENST00000261862|THSD4', 'nc|ENSG00000187720|Q6ZMP0-4|THSD4'] 119894 10280 VDISSHKPP True NCI_RA007_Epitope_Rep3 978.51344497634 978.51234993586 47.508 2 -0.6826272687389324 0.20814162527804017 1.0 ['ENSG00000139832|ENST00000267328|RAB20'] 115272 4128 TREGRWPPP True H1975_Epitope_Rep3 1094.5621265042598 1094.56102993586 21.002 2 -0.6827505398585612 0.20824192565508837 1.0 ['ENST00000379589.3_1_13:40175494-40177154:-|nuORF'] 76933 8106 NRDRRTADRWK True NCI_RA007_Epitope_Rep5 1472.7708904838798 1472.76925490379 37.866 3 -0.6827573719662889 0.20824192565508837 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 45784 12974 ISCCAKNR True PC9_epitope_Rep1 893.42114189797 893.42004993586 54.776 2 -0.682815215903779 0.2082539875992139 1.0 ['TINAG|p.W432Gfs*23|1|0.18|ENSG00000137251|chr6:54380566-54380566|T/-|frameshift_variant', 'TINAG|p.G439Efs*16|1|0.18|ENSG00000137251|chr6:54389807-54389807|G/-|frameshift_variant', 'ENSG00000137251|ENST00000259782|TINAG'] 45986 12178 ISFAGCFLQFY True H1975_Epitope_Rep2 1294.6056311090201 1294.60452993586 51.926 2 -0.6828377319553958 0.20826604917583255 1.0 ['OR11H12|p.P186Kfs*4|1|0.17|ENSG00000257115|chr14:18601671-18601672|CC/-|frameshift_variant', 'ENSG00000257115|ENST00000550708|OR11H12', 'OR11H1|p.C256Vfs*20|1|0.36|ENSG00000130538|chr22:15528922-15528922|C/-|frameshift_variant', 'ENSG00000258453|ENST00000556246|OR11H2', 'ENSG00000130538|ENST00000643195|OR11H1', 'nc|ENSG00000258453|Q8NH07|OR11H2', 'nc|ENSG00000130538|Q8NG94|OR11H1'] 118737 5733 TYVSNQTYQER True H1975_Epitope_Rep1 1387.63680756615 1387.6351649037902 27.12 3 -0.6828521010884913 0.20827811038496108 1.0 ['ENSG00000066248|ENST00000264051|NGEF', 'nc|ENSG00000066248|Q8N5V2-3|NGEF'] 79411 10173 PATLQTGP True PC9_epitope_Rep2 783.41266830591 783.41156993586 44.467 2 -0.682939989263305 0.20828699824815294 1.0 ['ENST00000336767.5_1_5:34915522-34915669:+|nuORF'] 41022 10780 HTHSRELWRSW True H1975_Epitope_Rep3 1493.7276286895699 1493.72652993586 46.545 2 -0.6829531110710745 0.20828699824815294 1.0 ['ENST00000420607.6_1_1:76198563-76199237:+|nuORF'] 8740 9934 AVAYIAGF True NCI_RA007_Epitope_Rep5 810.4275900940598 810.42648993586 44.853 2 -0.683039227573669 0.20832635154690998 1.0 ['ENSG00000157240|ENST00000287934|FZD1'] 112679 13378 TLGALEALSV True PC9_epitope_Rep3 972.54916177872 972.54806993586 56.49 2 -0.6830397315696816 0.20832635154690998 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4', 'FRMPD4|p.S1105Kfs*31|1|0.55|ENSG00000169933|chrX:12718133-12718134|-/A|frameshift_variant', 'FRMPD4|p.A947Qfs*130|1|0.11|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant'] 137422 17145 YECYCKQGTYY True H1975_Epitope_Rep2 1419.5475241795498 1419.54642993586 71.225 2 -0.6830401331900053 0.20833841091883987 1.0 ['nc|ENSG00000049323|Q14766-3|LTBP1', 'nc|ENSG00000049323|Q14766-2|LTBP1', 'nc|ENSG00000049323|Q14766-5|LTBP1', 'ENSG00000049323|ENST00000404816|LTBP1', 'nc|ENSG00000049323|Q14766-4|LTBP1'] 141719 24401 YTVRTLLR True NCI_RA007_Epitope_Rep2 1020.6080140675199 1020.6074749679301 102.48 1 -0.6830431294753364 0.2083504699233804 1.0 ['ENST00000307533.10_1_4:6676966-6677095:+|nuORF'] 132682 18777 VVGRKVWR True PC9_epitope_Rep3 998.6137681542999 998.61266993586 77.445 2 -0.6831269870827832 0.2084018765612624 1.0 ['ENST00000551108.1_1_12:29542438-29639896:+|nuORF'] 115800 6554 TSDKKDSFYTD True H1975_Epitope_Rep1 1305.5724759740897 1305.57136993586 30.267 2 -0.6831460452704177 0.2084018765612624 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B'] 37417 13881 GVTELRLLY True H1975_Epitope_Rep2 1062.60734536118 1062.6062499358602 58.537 2 -0.6831490653290594 0.2084018765612624 1.0 ['ENST00000455517.5_2_3:12330435-12330558:+|nuORF'] 109567 9833 TDVHKQYAI True PC9_epitope_Rep2 1073.55055876105 1073.54946993586 43.159 2 -0.68321457214182 0.20841393386440832 1.0 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 77484 6999 NTATLNIFKT True H1975_Epitope_Rep3 1121.6080736371698 1121.6069699358602 31.885 2 -0.6832353353817576 0.2084653344705739 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 94577 20530 RRRYLRRKER True NCI_RA007_Epitope_Rep5 1487.9021794369498 1487.90108993586 85.91 2 -0.6832381056650151 0.2084653344705739 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 89305 4958 QWFYFRVQNTR True NCI_RA007_Epitope_Rep4 1543.7684308723897 1543.76677490379 25.538 3 -0.6832410818944625 0.2084653344705739 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF', 'ENSG00000165923|ENST00000525123|AGBL2'] 18249 11575 EIQAVNGVTY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 49.511 2 -0.6832603937007903 0.2084773900726503 1.0 ['EPHB2|p.D416Y|1|0.18|ENSG00000133216|chr1:22865155-22865155|G/T|missense_variant'] 119604 16291 VATVNTIL True PC9_epitope_Rep5 829.49091862661 829.48982993586 67.657 2 -0.683355751993258 0.2085135546756016 1.0 ['ENST00000307729.11_1_10:21903809-21906041:+|nuORF'] 1781 8453 AEHDVTVKYY True H1975_Epitope_Rep3 1223.58225281215 1223.5811499358601 37.498 2 -0.6833635632073674 0.2085135546756016 1.0 ['ENSG00000146281|ENST00000275072|PM20D2'] 19358 16521 ELLLFEVAWE True PC9_epitope_Rep1 1247.64379043955 1247.64268993586 68.372 2 -0.6833657890520809 0.2085135546756016 1.0 ['ENSG00000111713|ENST00000261195|GYS2'] 22517 11820 ETGTRVGVVQY True H1975_Epitope_Rep2 1207.6197009500297 1207.6186099358601 50.542 2 -0.683402692628369 0.208525608808882 1.0 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 86275 20666 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 85.6 3 -0.6835400843548819 0.20861063308103497 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 101475 21293 SLLCALTPVPP True PC9_epitope_Rep1 1109.61546751673 1109.6143699358602 86.731 2 -0.6835409626440123 0.20861063308103497 1.0 ['ENST00000361722.7_1_17:45788235-45788682:+|nuORF'] 111951 8113 TIQEYQRY True H1975_Epitope_Rep3 1099.52982331647 1099.5287299358602 36.183 2 -0.6836438190656452 0.2086531432748538 1.0 ['ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 126666 6407 VLNVDPDNVT True NCI_RA007_Epitope_Rep4 1084.540053647 1084.53894993586 31.246 2 -0.6836652098713788 0.208680423360999 1.0 ['ENSG00000130222|ENST00000252506|GADD45G'] 19241 13810 ELITQLEQGK True PC9_epitope_Rep1 1157.62920300457 1157.6275649037902 57.964 3 -0.6837127797223929 0.20872293119727103 1.0 ['nc|ENSG00000125846|P52736-2|ZNF133', 'ENSG00000125846|ENST00000425686|ZNF133', 'nc|ENSG00000125846|P52736-5|ZNF133', 'ENST00000402618.6_1_20:18269192-18290832:+|nuORF'] 37268 12446 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 56.175 2 -0.6838173698495728 0.20876543773889472 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 18586 6204 EKQQM[Oxidation]EEDLRG True NCI_RA007_Epitope_Rep2 1377.6194436302897 1377.6183499358601 28.741 2 -0.6838371924593583 0.20877748675153804 1.0 ['nc|ENSG00000102001|O60840-5|CACNA1F', 'nc|ENSG00000102001|O60840-7|CACNA1F', 'nc|ENSG00000102001|O60840-4|CACNA1F', 'nc|ENSG00000102001|O60840-6|CACNA1F', 'ENSG00000102001|ENST00000323022|CACNA1F', 'nc|ENSG00000102001|O60840|CACNA1F'] 44280 9418 ILCRWVVP True H1975_Epitope_Rep1 984.5578930709598 984.55678993586 41.139 2 -0.6838862160621805 0.20884726663621136 1.0 ['ENST00000313640.11_1_13:43460845-43460983:-|nuORF'] 4668 5217 ALANSLAC[Carbamidomethyl]QGK True NCI_RA007_Epitope_Rep5 1131.57064286206 1131.56954993586 26.763 2 -0.683892585673251 0.20884726663621136 1.0 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 57606 9870 LEECHSLNV True PC9_epitope_Rep3 1042.47534521546 1042.4742499358601 42.923 2 -0.6839821668548746 0.2088713607016689 1.0 ['nc|ENSG00000137672|Q9Y210-2|TRPC6', 'nc|ENSG00000137672|Q9Y210-3|TRPC6', 'TRPC6|p.K888Sfs*22|1|0.16|ENSG00000137672|chr11:101453090-101453090|A/-|frameshift_variant', 'ENSG00000137672|ENST00000344327|TRPC6'] 39299 16812 HIPSTIAV True PC9_epitope_Rep3 836.47560291564 836.4745099358599 69.817 2 -0.6840056751733629 0.2088713607016689 1.0 ['ENSG00000036828|ENST00000639785|CASR', 'nc|ENSG00000036828|P41180-2|CASR'] 14621 7432 DVAQLPSRV True NCI_RA007_Epitope_Rep2 983.5399940773499 983.53888993586 33.535 2 -0.6840151830020383 0.20887704606014465 1.0 ['ENSG00000247596|ENST00000305533|TWF2'] 33772 13973 GLKTSSSLP True PC9_epitope_Rep1 888.4916469026 888.49054993586 58.585 2 -0.6840529802417349 0.20887704606014465 1.0 ['ENSG00000087074|ENST00000200453|PPP1R15A'] 94575 20341 RRRYLRRKER True NCI_RA007_Epitope_Rep4 1487.9021794369498 1487.90108993586 88.064 2 -0.6840581014009074 0.20887704606014465 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 138777 9037 YITHNRNVI True PC9_epitope_Rep6 1128.6039913162401 1128.60235490379 44.805 3 -0.6841159701690497 0.2089011373844725 1.0 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 2358 3987 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 20.462 2 -0.6841192407158585 0.2089011373844725 1.0 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 26114 12385 FGSGAGSSSF True PC9_epitope_Rep5 902.37701107318 902.37646496793 52.636 1 -0.6841801596416334 0.20897090394189924 1.0 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 44066 12317 IILKRKRGRPP True NCI_RA007_Epitope_Rep1 1332.8830071321597 1332.88135490379 51.881 3 -0.6842318007932425 0.20897090394189924 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 33398 18110 GLADLPSSPAP True PC9_epitope_Rep3 1023.52367530687 1023.5225699358599 74.857 2 -0.6842381458479382 0.20897340255469452 1.0 ['ENST00000409871.5_1_2:113033381-113033582:+|nuORF'] 15658 5596 EATEWQHKA True H1975_Epitope_Rep3 1098.50942222506 1098.50832993586 26.565 2 -0.6842462105117585 0.20897340255469452 1.0 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 63714 19036 LNASLLGGVL True PC9_epitope_Rep2 955.57023157647 955.56912993586 78.588 2 -0.6842710784269074 0.20897340255469452 1.0 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C', 'TFAP2B|p.R282Dfs*7|1|0.23|ENSG00000008196|chr6:50837991-50837991|G/-|frameshift_variant', 'TFAP2B|p.G280Wfs*42|1|0.11|ENSG00000008196|chr6:50837989-50837990|-/T|frameshift_variant', 'nc|ENSG00000137203|P05549-2|TFAP2A', 'ENSG00000008196|ENST00000393655|TFAP2B', 'nc|ENSG00000008196|Q92481-2|TFAP2B', 'nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A', 'ENSG00000116819|ENST00000373235|TFAP2E'] 100141 16581 SITEEFYRYML True PC9_epitope_Rep5 1450.6802526012598 1450.67914993586 68.785 2 -0.6842831122800033 0.20897340255469452 1.0 ['SPHKAP|p.T1640Pfs*16|1|0.09|ENSG00000153820|chr2:227991042-227991042|G/-|frameshift_variant', 'nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 137624 9815 YEGKAIAG True PC9_epitope_Rep1 807.4126683059098 807.41156993586 42.615 2 -0.684312328710452 0.2089759008631845 1.0 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1', 'ENST00000548668.1_1_1:220240634-220247398:-|nuORF', 'ENST00000482136.5_1_1:220240458-220263036:-|nuORF'] 63088 17971 LLQNNLVEL True PC9_epitope_Rep6 1054.60225998074 1054.60116993586 81.753 2 -0.6843297806754267 0.2089759008631845 1.0 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant'] 86276 20754 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 85.941 3 -0.6843403747355242 0.2089759008631845 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 140807 14512 YSDLAFLLQIP True H1975_Epitope_Rep3 1278.6859896047 1278.6848899358602 61.182 2 -0.6843541815479509 0.2089759008631845 1.0 ['PPFIA3|p.L1085F|1|0.68|ENSG00000177380|chr19:49149138-49149138|G/C|missense_variant'] 116897 12511 TVFILVVSF True PC9_epitope_Rep1 1023.6004690755899 1023.59936993586 52.992 2 -0.6843616976521608 0.20898476152780526 1.0 ['ENST00000333449.8_1_11:62557646-62557730:+|nuORF'] 14554 7811 DTSYILQLP True H1975_Epitope_Rep2 1048.54407639828 1048.5429699358601 34.992 2 -0.6843656115516175 0.20898476152780526 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G'] 112384 13878 TLARNCHELE True PC9_epitope_Rep1 1184.5608061749201 1184.5597099358602 58.221 2 -0.6843838157633572 0.20899362165289004 1.0 ['nc|ENSG00000108306|Q96IG2-2|FBXL20', 'ENSG00000108306|ENST00000264658|FBXL20'] 5337 6430 ALRKQVAVVA True PC9_epitope_Rep4 1053.66586329681 1053.66476993586 31.828 2 -0.6844245158805089 0.20899362165289004 1.0 ['ENSG00000153237|ENST00000283233|CCDC148'] 96997 3615 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 19.022 2 -0.6844327520235379 0.20903292588251413 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 498 5761 AAPAAPAAAA True PC9_epitope_Rep1 780.4130026590799 780.41190993586 26.976 2 -0.6844686298106276 0.20903292588251413 1.0 ['ENST00000609309.2_3_7:99955774-99964972:+|nuORF', 'ENST00000452089.5_3_7:99950875-99964972:+|nuORF'] 139319 24843 YLKQRLRHK True NCI_RA007_Epitope_Rep1 1240.75165860944 1240.75107496793 102.83 1 -0.6844755663612565 0.20906018814503607 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF', 'nc|ENSG00000169247|Q8TF17-4|SH3TC2'] 114042 23201 TPDRIRFP True PC9_epitope_Rep1 1000.5454138109599 1000.54430993586 94.039 2 -0.6845227184121825 0.2090690452995616 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'APOPT1-MARK3|2|fusion', 'APOPT1-MARK3|4|fusion', 'APOPT1-MARK3|1|fusion', 'APOPT1-MARK3|3|fusion'] 59181 15753 LFCPRLCCL True PC9_epitope_Rep4 1066.51259975466 1066.5115099358602 68.517 2 -0.684524867177327 0.2090690452995616 1.0 ['ENST00000290231.10_1_20:44690715-44691024:-|nuORF'] 12246 7070 DIKFQHFNP True NCI_RA007_Epitope_Rep5 1144.56654317836 1144.5654499358602 33.876 2 -0.6845662752374462 0.20909630576738664 1.0 ['ENSG00000147459|ENST00000276440|DOCK5'] 80908 6627 PHYSVNALAL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 30.902 2 -0.6846724279085549 0.2091692288958568 1.0 ['ENSG00000105392|ENST00000221996|CRX'] 44018 19919 IIHSVGDEEG True PC9_epitope_Rep3 1054.49310345458 1054.49200993586 81.859 2 -0.6846986827018229 0.2091943878016861 1.0 ['ENST00000436137.2_1_11:124530361-124543691:-|nuORF'] 60071 14795 LGLHRRGRRQA True PC9_epitope_Rep2 1318.78066732194 1318.77901490379 62.172 3 -0.6847070962144961 0.2091943878016861 1.0 ['ENST00000489548.1_1_6:13272670-13278506:+|nuORF'] 53596 24368 KRRRFVWTFWR True PC9_epitope_Rep4 1636.9215178991994 1636.92042993586 102.21 2 -0.6847152900807615 0.2091943878016861 1.0 ['ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 39185 15218 HIETTWKCLF True PC9_epitope_Rep4 1276.6274291827601 1276.62577490379 66.462 3 -0.6847343049990405 0.2091943878016861 1.0 ['TLR6|p.V267F|1|0.18|ENSG00000174130|chr4:38828675-38828675|C/A|missense_variant'] 66640 12896 LSKMAQRPYQ True PC9_epitope_Rep2 1220.63357719236 1220.63194490379 54.903 3 -0.6847605923314922 0.2091943878016861 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2'] 117589 6992 TVSSAKPGP True H1975_Epitope_Rep3 842.4497820906199 842.44868993586 31.857 2 -0.6847643771214621 0.2091943878016861 1.0 ['nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 57232 12663 LDWFRLQVM True H1975_Epitope_Rep3 1206.6219498794999 1206.6208499358602 53.917 2 -0.6848515854383258 0.2091943878016861 1.0 ['ENST00000549451.1_1_12:54912642-54912774:+|nuORF'] 74389 16051 NESAVIVAP True PC9_epitope_Rep4 898.4759968384599 898.47544496793 69.676 1 -0.6848835283532783 0.2091943878016861 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 96996 3521 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 18.668 2 -0.6849029488370648 0.2091943878016861 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 48262 14830 IYQRCWLVF True PC9_epitope_Rep5 1226.6270352599397 1226.62537490379 62.044 3 -0.6849562568176807 0.2091943878016861 1.0 ['ENSG00000101134|ENST00000262593|DOK5'] 13076 7540 DLPYNTTFMP True NCI_RA007_Epitope_Rep1 1197.53761111885 1197.53650993586 33.323 2 -0.684969940827974 0.2091943878016861 1.0 ['ENSG00000104290|ENST00000240093|FZD3'] 5449 8976 ALVLKQPI True NCI_RA007_Epitope_Rep5 880.57458868092 880.57348993586 41.184 2 -0.6849723552220883 0.2091943878016861 1.0 ['ALDH5A1|p.A198P|1|0.1|ENSG00000112294|chr6:24503416-24503416|G/C|missense_variant', 'ENSG00000112294|ENST00000357578|ALDH5A1', 'nc|ENSG00000112294|P51649-2|ALDH5A1'] 67481 4577 LSSSSHGVP True PC9_epitope_Rep4 869.42429561877 869.42318993586 24.102 2 -0.6850329933567186 0.2091943878016861 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 135253 6555 WFMKYQHVDPE True H1975_Epitope_Rep3 1478.66527124346 1478.66362490379 30.176 3 -0.685033452026931 0.2091943878016861 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD', 'ENST00000414118.2_1_7:102743878-102755668:-|nuORF'] 40262 10919 HQLELKFER True PC9_epitope_Rep6 1198.64585612822 1198.64422490379 52.866 3 -0.6850469211614627 0.2091943878016861 1.0 ['nc|ENSG00000188659|Q658L1-2|SAXO2', 'nc|ENSG00000188659|Q658L1|SAXO2', 'ENSG00000188659|ENST00000682753|SAXO2'] 20641 19004 EPWMMEKKLSK True PC9_epitope_Rep5 1405.70977890773 1405.70868993586 78.126 2 -0.6850617917883235 0.2091943878016861 1.0 ['ZNF181|p.N181Ifs*8|1|0.69|ENSG00000197841|chr19:34740919-34740919|G/-|frameshift_variant', 'ENSG00000089335|ENST00000505242|ZNF302', 'ENST00000509196.1_1_19:35173669-35176139:+|nuORF', 'nc|ENSG00000089335|Q9NR11|ZNF302', 'nc|ENSG00000197841|Q2M3W8-3|ZNF181', 'ENSG00000197841|ENST00000492450|ZNF181'] 123723 16050 VGRFQERLPK True NCI_RA007_Epitope_Rep1 1228.70403971068 1228.70239490379 66.534 3 -0.6850838230624786 0.2092032381763954 1.0 ['ENSG00000179041|ENST00000320270|RRS1'] 67338 12322 LSSFDYEQFRD True NCI_RA007_Epitope_Rep2 1405.6150094924099 1405.6139099358602 52.533 2 -0.6851205844953315 0.2092032381763954 1.0 ['PCDHGA12|p.R718Afs*15|1|0.68|ENSG00000253159|chr5:141432909-141432909|G/-|frameshift_variant', 'nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12'] 132342 8065 VTYSSRSYL True H1975_Epitope_Rep1 1074.53457434374 1074.53346993586 35.965 2 -0.6851800437201404 0.20922412087828482 1.0 ['B4GALNT1|p.Q231L|1|0.07|ENSG00000135454|chr12:57630172-57630172|T/A|missense_variant'] 5119 8950 ALLLKFMAP True PC9_epitope_Rep5 1002.5936098733399 1002.59250993586 39.369 2 -0.685189066339269 0.20922412087828482 1.0 ['nc|ENSG00000119509|Q9Y283-2|INVS', 'INVS|p.R914Lfs*31|1|0.05|ENSG00000119509|chr9:100292997-100292998|-/TTGGT|frameshift_variant', 'ENSG00000119509|ENST00000262457|INVS'] 55620 11055 LAIQVKLTVAP True NCI_RA007_Epitope_Rep1 1151.7277948470298 1151.7266899358601 46.998 2 -0.6852117878279326 0.20922412087828482 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 109988 3697 TEIGWWKLTFL True NCI_RA007_Epitope_Rep2 1392.7441731871597 1392.7425149037902 19.028 3 -0.6852992218791327 0.20923615337796714 1.0 ['ENSG00000167183|ENST00000300557|PRR15L'] 137284 5431 YCRRWRYWEYW True PC9_epitope_Rep5 1765.7936000744096 1765.79194490379 25.901 3 -0.685312897837384 0.20924818551148036 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 92174 23471 RLFRMLRIF True PC9_epitope_Rep5 1250.7434024248598 1250.74174490379 95.267 3 -0.6853917443967622 0.2092906484890904 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 3136 7770 AGASQAKAYK True NCI_RA007_Epitope_Rep4 993.5243440132098 993.52324993586 36.569 2 -0.6854254960193091 0.2093299251415008 1.0 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 120589 13412 VEHFEFFSL True PC9_epitope_Rep2 1153.54441075145 1153.5433099358602 56.869 2 -0.6854282955266601 0.2093299251415008 1.0 ['RASAL2|p.G361V|1|0.28|ENSG00000075391|chr1:178445561-178445561|G/T|missense_variant'] 141754 9647 YTYSQASEI True PC9_epitope_Rep5 1060.4713053808398 1060.47020993586 42.074 2 -0.6855440518517159 0.2093723849372385 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1'] 63513 15362 LLYFFILCENK True H1975_Epitope_Rep3 1401.7366452785698 1401.73554993586 64.5 2 -0.6855652818048577 0.2093932570593963 1.0 ['ENSG00000134538|ENST00000256958|SLCO1B1'] 36885 9302 GVLLVRAPP True H1975_Epitope_Rep1 920.5807366905199 920.57962993586 40.688 2 -0.6856207189610981 0.2093932570593963 1.0 ['STOX1|p.Y782Lfs*9|1|0.29|ENSG00000165730|chr10:68886139-68886140|-/T|frameshift_variant', 'STOX1|p.L805Cfs*20|1|0.18|ENSG00000165730|chr10:68886206-68886206|G/-|frameshift_variant', 'ENSG00000165730|ENST00000298596|STOX1', 'STOX1|p.G417Vfs*55|1|0.25|ENSG00000165730|chr10:68885044-68885044|G/-|frameshift_variant', 'nc|ENSG00000165730|Q6ZVD7-3|STOX1', 'nc|ENSG00000165730|Q6ZVD7-2|STOX1'] 130637 13618 VSSYTETPV True H1975_Epitope_Rep2 981.46549172441 981.46438993586 57.519 2 -0.6856312379827503 0.2093932570593963 1.0 ['SLC7A14|p.A387S|1|0.37|ENSG00000013293|chr3:170481123-170481123|C/A|missense_variant', 'SLC7A14|p.N510Ifs*7|1|0.23|ENSG00000013293|chr3:170480755-170480755|G/-|frameshift_variant', 'ENSG00000013293|ENST00000231706|SLC7A14'] 20642 4574 EPWNRSCRRWK True NCI_RA007_Epitope_Rep3 1516.74698423516 1516.74532490379 24.878 3 -0.6856487901451377 0.20940528533828295 1.0 ['ENST00000511799.5_3_5:60095008-60139355:-|nuORF'] 20937 5946 EQNWRQHREAY True H1975_Epitope_Rep1 1515.69672248411 1515.69508490379 27.942 3 -0.6856692388908003 0.20942934079810135 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 135510 551 WKERILKAK True PC9_epitope_Rep1 1170.7237125260997 1170.7220549037902 3.0591 3 -0.6856711500793515 0.20942934079810135 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 19135 18563 ELGQARIRWEV True PC9_epitope_Rep1 1355.7309827345098 1355.72988993586 76.19 2 -0.6857376776886318 0.20951743443071869 1.0 ['ENST00000484500.5_1_3:125642769-125647435:+|nuORF'] 81927 8445 PLSPHASGSL True PC9_epitope_Rep5 964.4977949122 964.49668993586 37.426 2 -0.6857703613576139 0.209543947184277 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 56378 13930 LDDSALYLSDK True PC9_epitope_Rep3 1238.60304782638 1238.6019499358601 58.66 2 -0.6857947892092503 0.209543947184277 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 61784 9654 LLAPAPNK True PC9_epitope_Rep2 822.4963383602201 822.49524993586 42.473 2 -0.6858028218190196 0.209543947184277 1.0 ['ENST00000506459.1_1_4:33012907-33013108:-|nuORF'] 22713 8637 ETSAVIIAAP True NCI_RA007_Epitope_Rep1 970.5335117145798 970.53240993586 37.598 2 -0.6858273833948683 0.209543947184277 1.0 ['ENSG00000132842|ENST00000255194|AP3B1', 'nc|ENSG00000132842|O00203-3|AP3B1'] 19082 12887 ELGEKLSPLP True PC9_epitope_Rep1 1081.60192562757 1081.60082993586 54.444 2 -0.685828909321708 0.209543947184277 1.0 ['ENSG00000166886|ENST00000300131|NAB2', 'nc|ENSG00000166886|Q15742-3|NAB2', 'nc|ENSG00000166886|Q15742-2|NAB2'] 5918 16122 APGPVLAPT True PC9_epitope_Rep3 821.4647038787699 821.46360993586 67.163 2 -0.6858319950144295 0.209543947184277 1.0 ['nc|ENSG00000288550|Q8NAC3-4|IL17RC', 'ENST00000483582.5_1_3:9958999-9974679:+|nuORF', 'nc|ENSG00000288550|Q8NAC3-6|IL17RC', 'nc|ENSG00000288550|Q8NAC3-7|IL17RC', 'nc|ENSG00000288550|Q8NAC3-8|IL17RC', 'nc|ENSG00000288550|Q8NAC3-3|IL17RC', 'nc|ENSG00000288550|Q8NAC3-5|IL17RC', 'ENST00000451271.5_1_3:9958923-9975274:+|nuORF', 'ENSG00000163702|ENST00000403601|IL17RC', 'nc|ENSG00000288550|Q8NAC3|IL17RC'] 125727 26598 VKRRRCGTR True PC9_epitope_Rep1 1130.6567126787797 1130.6556099358602 108.05 2 -0.685922872917674 0.2096408633881444 1.0 ['ENST00000229633.6_1_6:126277992-126278139:+|nuORF'] 53438 12758 KREEIMITCEP True H1975_Epitope_Rep3 1347.6526579544297 1347.65101490379 54.288 3 -0.6859236542814608 0.2096408633881444 1.0 ['SHCBP1L|p.S457C|1|0.18|ENSG00000157060|chr1:182904397-182904397|G/C|missense_variant'] 78077 14935 NVVHQNKQL True PC9_epitope_Rep2 1078.5883412521 1078.5872499358602 62.707 2 -0.6859666461905745 0.2096408633881444 1.0 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 136579 9659 WWHSYWRVWIY True NCI_RA007_Epitope_Rep1 1680.79900272468 1680.7979099358602 41.569 2 -0.6860467124312669 0.20965288552219283 1.0 ['ENST00000295992.7_1_3:142606565-142606607:-|nuORF'] 118798 13794 VAAEPYLYREA True NCI_RA007_Epitope_Rep5 1280.6401020414398 1280.63900993586 59.734 2 -0.6861253952429358 0.20966490729051002 1.0 ['ENSG00000175029|ENST00000309035|CTBP2'] 27581 3470 FNKKMYEEFK True NCI_RA007_Epitope_Rep2 1362.6642086143 1362.66256490379 18.155 3 -0.6861304201458673 0.2096921392066196 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 2359 4083 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 20.832 2 -0.6861523222219129 0.20971937029431895 1.0 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 9340 19123 AVRPGHRGL True PC9_epitope_Rep5 961.5569815541699 961.55588993586 78.591 2 -0.6861830734611248 0.20976181060444743 1.0 ['ENST00000591201.5_1_19:1487843-1489828:-|nuORF', 'ENST00000587784.5_1_19:1487843-1490668:-|nuORF'] 122395 10913 VGDPKIGAAI True PC9_epitope_Rep4 939.5389314481898 939.53782993586 49.746 2 -0.6862481060769217 0.20977063941108476 1.0 ['ENSG00000101361|ENST00000329276|NOP56', 'NOP56|p.N317Tfs*23|1|0.14|ENSG00000101361|chr20:2655973-2655973|A/-|frameshift_variant'] 17215 6349 EGVTEAKHP True NCI_RA007_Epitope_Rep3 966.4770594676199 966.47596993586 31.978 2 -0.686262622133315 0.20977063941108476 1.0 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 13028 8788 DLNLRQFGP True PC9_epitope_Rep3 1058.5508931142201 1058.5497899358602 38.755 2 -0.6863811555000358 0.2097762771668872 1.0 ['ENSG00000227057|ENST00000374617|WDR46'] 68898 15644 LTNLLGLH True PC9_epitope_Rep3 879.51780208079 879.51670993586 65.322 2 -0.6864295850696475 0.2097762771668872 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant', 'UTRN|p.Q931Rfs*4|1|0.33|ENSG00000152818|chr6:144461278-144461278|C/-|frameshift_variant'] 125026 9581 VIDAKFETKAR True H1975_Epitope_Rep3 1276.71393568804 1276.71282993586 41.864 2 -0.6864499634905563 0.2097762771668872 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'nc|ENSG00000085224|P46100-6|ATRX'] 127860 9822 VPFREAALR True H1975_Epitope_Rep1 1057.6032630402499 1057.60216993586 42.708 2 -0.686512576314561 0.209818712738776 1.0 ['ENSG00000117597|ENST00000491415|UTP25'] 70662 25353 LWHIWRERN True PC9_epitope_Rep4 1308.68397297244 1308.68233490379 106.38 3 -0.6865578974429156 0.20986114701990782 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 81987 8738 PLTSDKNRI True H1975_Epitope_Rep1 1042.57710786206 1042.5760099358602 38.539 2 -0.6865976716400536 0.20994281890625952 1.0 ['ENSG00000274209|ENST00000620264|ANTXRL'] 97172 3560 SDTWEPPRHVK True NCI_RA007_Epitope_Rep2 1350.6680481247802 1350.66640490379 18.496 3 -0.686617362967137 0.20994281890625952 1.0 ['ENSG00000165156|ENST00000395571|ZHX1'] 12645 11669 DLDDSDLP True PC9_epitope_Rep6 888.3712569864 888.37014993586 56.013 2 -0.6866177009603586 0.20994281890625952 1.0 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant', 'ENST00000473813.1_1_21:40582792-40590527:-|nuORF'] 64080 6197 LPCPLTPDPQP True H1975_Epitope_Rep3 1176.58489566444 1176.58324490379 28.85 3 -0.6866227545212592 0.20995483370591725 1.0 ['ENST00000415602.5_3_20:62694892-62695267:+|nuORF'] 63910 8583 LNQGDLTER True H1975_Epitope_Rep1 1044.5199869087598 1044.5188899358602 37.942 2 -0.68670155348702 0.21004288451595243 1.0 ['ENST00000556551.2_1_14:74389384-74398241:+|nuORF', 'nc|ENSG00000119725|Q86VK4-4|ZNF410', 'nc|ENSG00000119725|Q86VK4-3|ZNF410', 'ENSG00000119725|ENST00000555044|ZNF410'] 66612 14739 LSKAGKLCVP True PC9_epitope_Rep3 1014.5895871220599 1014.58848993586 61.832 2 -0.6867134042651464 0.21005489742848887 1.0 ['nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2', 'ENST00000492628.1_1_7:129040195-129045055:+|nuORF'] 39300 5698 HIPVLPGK True NCI_RA007_Epitope_Rep5 859.5279728416699 859.52686993586 28.604 2 -0.6867603094759954 0.2100669099756691 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 44399 10644 ILFWFFCRFHE True PC9_epitope_Rep3 1543.7434619945095 1543.74181490379 45.89 3 -0.686830067734215 0.21007253318735458 1.0 ['ENST00000300571.6_1_16:19870530-19870800:-|nuORF'] 17026 7037 EGEAEIQEHGP True NCI_RA007_Epitope_Rep1 1194.5152954511398 1194.51418993586 31.37 2 -0.6868733527984137 0.21007253318735458 1.0 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 130668 13175 VSTGTLVP True PC9_epitope_Rep1 772.4330693973199 772.43196993586 55.541 2 -0.6868833790551144 0.21007253318735458 1.0 ['ENST00000562590.5_1_16:28922190-28936514:-|nuORF', 'ENSG00000177548|ENST00000358201|RABEP2', 'nc|ENSG00000177548|Q9H5N1-2|RABEP2'] 85406 17924 QEVQGYVL True PC9_epitope_Rep5 934.4759968384598 934.47488993586 73.962 2 -0.6870086035146072 0.2101605741743203 1.0 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'ENST00000584908.5_1_17:37856482-37868536:+|nuORF'] 67712 11853 LSWREERRREE True H1975_Epitope_Rep3 1544.7807864612398 1544.77968993586 50.74 2 -0.6870319177767364 0.21020299551433133 1.0 ['ENSG00000204438|ENST00000375896|GPANK1'] 63969 17103 LNVDGLLVY True H1975_Epitope_Rep3 1004.55424715916 1004.5536749679301 71.407 1 -0.6870673430939399 0.21021500471368185 1.0 ['ENSG00000104884|ENST00000391945|ERCC2'] 75949 6505 NLSTRDASI True PC9_epitope_Rep4 975.4985231881899 975.4974299358599 32.144 2 -0.687153514162375 0.21025742393601654 1.0 ['NETO1|p.L455F|1|0.13|ENSG00000166342|chr18:72750238-72750238|C/A|missense_variant', 'nc|ENSG00000166342|Q8TDF5-2|NETO1', 'ENSG00000166342|ENST00000327305|NETO1'] 18027 6499 EIEPETEGI True H1975_Epitope_Rep2 1015.47097102767 1015.46986993586 29.915 2 -0.6872411324237135 0.21028463690548596 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000445090.5_1_2:233028172-233195406:+|nuORF', 'nc|ENSG00000144535|Q8IYB7-2|DIS3L2', 'nc|ENSG00000144535|Q8IYB7-3|DIS3L2'] 101419 19631 SLKQCLLTL True PC9_epitope_Rep1 1017.58925276889 1017.58814993586 80.336 2 -0.6873167823869916 0.2103422585108486 1.0 ['nc|ENSG00000115896|Q15111-2|PLCL1', 'PLCL1|p.D986Tfs*30|1|0.41|ENSG00000115896|chr2:198101320-198101320|G/-|frameshift_variant', 'ENSG00000115896|ENST00000428675|PLCL1'] 117221 13775 TVLNLHQHLK True PC9_epitope_Rep6 1201.6931406738101 1201.69150490379 64.787 3 -0.6873593323627464 0.21036627084885437 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000557060.1_1_14:64540716-64565614:+|nuORF'] 96995 4176 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 20.959 2 -0.6873782676777661 0.21036627084885437 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 58237 23464 LELKLRIFRLL True PC9_epitope_Rep3 1412.9231406086399 1412.92204993586 95.533 2 -0.6874838894048244 0.21041749019369355 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 129743 23747 VRQLRHLHRTR True PC9_epitope_Rep3 1470.8756303359398 1470.8745299358602 96.628 2 -0.6874849823353045 0.21041749019369355 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 132344 8212 VTYSSRSYL True H1975_Epitope_Rep3 1074.53457434374 1074.53346993586 36.57 2 -0.6875215807477673 0.21041749019369355 1.0 ['B4GALNT1|p.Q231L|1|0.07|ENSG00000135454|chr12:57630172-57630172|T/A|missense_variant'] 30510 8202 GAGGSGAR True NCI_RA007_Epitope_Rep2 631.30378656327 631.30323496793 36.539 1 -0.6875446153121865 0.21042309621904312 1.0 ['ENST00000375098.7_1_9:100872213-100881366:-|nuORF'] 44285 10917 ILCWYIYLVWY True H1975_Epitope_Rep3 1533.77303078729 1533.77192993586 47.08 2 -0.6875572312824552 0.21042309621904312 1.0 ['ENST00000334955.12_1_7:77409008-77409110:+|nuORF'] 118866 10181 VAATYPYQV True PC9_epitope_Rep4 1010.50729696674 1010.50618993586 46.838 2 -0.6875624844076889 0.21042309621904312 1.0 ['ENSG00000164933|ENST00000297578|SLC25A32', 'ENST00000523701.1_1_8:104413742-104414267:-|nuORF'] 81325 24351 PLALMQTPLP True PC9_epitope_Rep3 1079.60490283303 1079.60437496793 98.979 1 -0.6876075023741186 0.2104350998814193 1.0 ['nc|ENSG00000186090|Q70Z44|HTR3D'] 44125 13716 IIQQEYLDTYY True NCI_RA007_Epitope_Rep1 1447.6871118035099 1447.68600993586 57.368 2 -0.6876420214636119 0.2104423164614683 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 34402 3517 GPGVPPKR True NCI_RA007_Epitope_Rep2 806.47627162198 806.47516993586 18.33 2 -0.6876590580409848 0.2104423164614683 1.0 ['ENSG00000062822|ENST00000440232|POLD1', 'ENST00000600746.1_1_19:50902108-50905775:+|nuORF'] 43376 15419 IGARSLSVL True PC9_epitope_Rep1 914.5549158655 914.55380993586 64.128 2 -0.6876803872776445 0.2104423164614683 1.0 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 14851 8400 DVWFGFLP True H1975_Epitope_Rep3 979.4803539429098 979.47924993586 37.294 2 -0.6877420376815513 0.2104423164614683 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000563874.5_2_16:28488839-28493793:-|nuORF', 'ENST00000561689.6_2_16:28488839-28493686:-|nuORF'] 135522 24515 WKKKKKKKK True H1975_Epitope_Rep2 1228.8495817455598 1228.84848993586 100.85 2 -0.6877680215946225 0.2104423164614683 1.0 ['ENST00000433510.2_1_17:46713876-46724046:-|nuORF'] 3810 16230 AGVEIPEPVF True PC9_epitope_Rep2 1056.54916177872 1056.5480699358602 67.674 2 -0.6877687551846927 0.2104423164614683 1.0 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'nc|ENSG00000164347|Q969S9-5|GFM2', 'nc|ENSG00000164347|Q969S9-4|GFM2', 'ENST00000515125.5_1_5:74021945-74032693:-|nuORF', 'ENST00000514734.5_1_5:74026495-74034184:-|nuORF'] 83855 8950 PVMLFFSL True PC9_epitope_Rep2 952.5092115430399 952.50810993586 39.783 2 -0.6877711677830872 0.2104423164614683 1.0 ['ENSG00000165152|ENST00000374848|PGAP4'] 46777 11209 ITFMTELLES True PC9_epitope_Rep3 1182.5842269580999 1182.5831299358601 48.125 2 -0.6877941791632894 0.2104423164614683 1.0 ['FERD3L|p.S151T|1|0.07|ENSG00000146618|chr7:19144912-19144912|A/T|missense_variant'] 84902 5608 QEDALPAV True PC9_epitope_Rep4 841.4181476091699 841.4175949679301 28.365 1 -0.6877948898154628 0.2104423164614683 1.0 ['ENST00000595753.5_1_19:16664282-16664408:-|nuORF'] 5127 6515 ALLNLPAVP True NCI_RA007_Epitope_Rep2 906.5538532363399 906.55274993586 29.952 2 -0.6878136521144144 0.2104423164614683 1.0 ['DBX2|p.A28V|1|0.5|ENSG00000185610|chr12:45050845-45050845|G/A|missense_variant'] 46155 11819 ISLGTAWPPP True H1975_Epitope_Rep3 1037.5545815123298 1037.5534899358602 50.607 2 -0.6878524255835325 0.2104423164614683 1.0 ['SRRM2|p.R2194W|1|0.2|ENSG00000167978|chr16:2767108-2767108|C/T|missense_variant'] 73630 9139 MWNWMVSL True PC9_epitope_Rep5 1065.47759414493 1065.4764899358602 40.099 2 -0.6878660759021584 0.2104423164614683 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 124998 14007 VHYYAIWKYLY True PC9_epitope_Rep3 1517.77072228817 1517.7690749037902 58.959 3 -0.6879233413968282 0.21048151750972763 1.0 ['ENSG00000108960|ENST00000262065|MMD'] 141421 4963 YTESDVHPS True H1975_Epitope_Rep2 1033.43525422529 1033.4341499358602 24.173 2 -0.6879288990143144 0.21048151750972763 1.0 ['nc|ENSG00000164136|P40933-2|IL15', 'ENSG00000164136|ENST00000320650|IL15'] 33432 10237 GLAFLPLSGGP True H1975_Epitope_Rep3 1027.5702315764697 1027.56912993586 44.424 2 -0.6879960971823166 0.21049351754745946 1.0 ['ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 21086 7116 EQWWRWNRWPG True PC9_epitope_Rep4 1599.7483641341496 1599.7467149037898 34.642 3 -0.6880346875579226 0.21050551722041524 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 28252 6740 FRKSPSLAAF True NCI_RA007_Epitope_Rep3 1122.6185787512197 1122.61693490379 33.603 3 -0.6880615921568837 0.21052311620413994 1.0 ['nc|ENSG00000197093|Q96RP7-2|GAL3ST4', 'ENST00000423751.2_1_7:99757553-99764836:-|nuORF', 'ENSG00000197093|ENST00000360039|GAL3ST4'] 33735 9834 GLIHLYTAT True H1975_Epitope_Rep3 987.53893144819 987.53782993586 42.855 2 -0.6880835334834772 0.21052311620413994 1.0 ['ENSG00000118972|ENST00000237837|FGF23'] 86472 12287 QKRRRRVHHQR True H1975_Epitope_Rep1 1555.9144754561498 1555.9128149037901 52.286 3 -0.6880939825339589 0.21052311620413994 1.0 ['ENST00000300591.10_1_18:44118269-44121845:-|nuORF'] 100577 9655 SLCHAWSI True PC9_epitope_Rep5 915.42727282423 915.42616993586 42.105 2 -0.6881443634750247 0.21052311620413994 1.0 ['ENST00000263401.9_1_11:36297688-36300030:-|nuORF'] 14536 4849 DTQWTKVGRTP True H1975_Epitope_Rep3 1287.6571490879098 1287.6555149037902 23.777 3 -0.6882351112248181 0.21056551011413546 1.0 ['ENST00000537356.3_1_X:103357914-103358230:+|nuORF'] 463 11862 AALSLSLAGGS True H1975_Epitope_Rep3 945.51311062317 945.51200993586 50.776 2 -0.6882780623860151 0.21057750759878419 1.0 ['ENST00000380243.8_2_14:99979836-99979959:-|nuORF'] 97201 4997 SDYEVAEKIWF True NCI_RA007_Epitope_Rep2 1385.6503323719696 1385.6486849037901 24.061 3 -0.6883173597271908 0.21058310411379422 1.0 ['ARAP2|p.P1501Qfs*6|1|1.0|ENSG00000047365|chr4:36083374-36083374|G/-|frameshift_variant', 'ENSG00000047365|ENST00000303965|ARAP2', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 4547 21648 AKKIKRPKFTV True NCI_RA007_Epitope_Rep5 1314.8499756683798 1314.84832490379 90.361 3 -0.6883500107084055 0.21058310411379422 1.0 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'nc|ENSG00000205221|Q6UXI7-3|VIT'] 74269 10131 NEIKDSVVAGF True H1975_Epitope_Rep2 1177.5979028762897 1177.5968099358602 43.968 2 -0.6883552241794494 0.21058310411379422 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 113537 13351 TLTPLPYP True PC9_epitope_Rep2 900.49566965388 900.49456993586 56.627 2 -0.6884379611230598 0.21059190031152647 1.0 ['ENST00000498057.1_1_3:48678700-48679554:-|nuORF'] 107816 13591 SVTVYRWQ True NCI_RA007_Epitope_Rep4 1037.52942939365 1037.52887496793 59.484 1 -0.6884423703435945 0.21059190031152647 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ENST00000509621.1_3_5:89989878-90055411:+|nuORF'] 130229 20873 VSFDVFNCQF True PC9_epitope_Rep2 1204.5222954078797 1204.52118993586 85.731 2 -0.6884615475198189 0.21061909248396804 1.0 ['ENST00000431461.1_1_6:110522811-110530492:+|nuORF'] 4831 8416 ALEHLKKEQEE True NCI_RA007_Epitope_Rep2 1352.6935941662798 1352.69248993586 37.378 2 -0.6885118601010739 0.21063108787818924 1.0 ['ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000532108.1_1_11:4623360-4626734:-|nuORF'] 69457 15432 LTYWPQKYWAV True PC9_epitope_Rep5 1453.73942215989 1453.73832993586 64.368 2 -0.6885339099908816 0.21065507757297633 1.0 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'nc|ENSG00000185808|P57054-3|PIGP'] 22017 17948 ESIIRMTEL True PC9_epitope_Rep4 1090.5692456003 1090.5681499358602 77.09 2 -0.6885727499387856 0.21065507757297633 1.0 ['ENST00000548443.2_14:19856929-19857043:-|nuORF'] 89894 26347 RCGCGCAA True H1975_Epitope_Rep1 739.2563850719899 739.25583496793 109.49 1 -0.6887479216520681 0.21078863394620878 1.0 ['ENST00000368314.5_1_6:127587778-127587985:+|nuORF'] 47807 21032 IYGEGFQTW True PC9_epitope_Rep5 1099.4974605590298 1099.49687496793 85.958 1 -0.6887794493319922 0.21080062603516128 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 28718 11503 FSRRNLYKQDL True NCI_RA007_Epitope_Rep1 1438.7680965192196 1438.76644490379 48.71 3 -0.6888177941521255 0.21084300735428188 1.0 ['ENST00000475622.5_1_5:1483549-1494822:-|nuORF'] 36263 7892 GVDVTELAK True NCI_RA007_Epitope_Rep1 930.5022115863 930.50110993586 34.691 2 -0.6888767346027206 0.21086698878658036 1.0 ['ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3', 'ENST00000377653.2_1_9:39174468-39266986:-|nuORF'] 53648 4993 KSAFSCFHY True H1975_Epitope_Rep2 1088.47495129264 1088.47384993586 24.291 2 -0.6889325212725471 0.21086698878658036 1.0 ['ENSG00000163528|ENST00000396914|CHCHD4', 'nc|ENSG00000163528|Q8N4Q1-2|CHCHD4'] 37063 8661 GVPMTLCSP True PC9_epitope_Rep5 903.4194105624699 903.41830993586 38.258 2 -0.689007037821962 0.21090616263522546 1.0 ['ENSG00000132256|ENST00000380034|TRIM5'] 15835 4851 EDELQVGNVP True H1975_Epitope_Rep3 1098.51931820242 1098.51822993586 23.785 2 -0.6890182290588952 0.21090616263522546 1.0 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 96403 9273 SAAAARVEEAE True PC9_epitope_Rep4 1102.5254662120199 1102.52436993586 43.272 2 -0.6890353711113806 0.21091174280982694 1.0 ['ENST00000522751.5_1_17:78389368-78389413:+|nuORF'] 43519 7192 IGNLHLAK True NCI_RA007_Epitope_Rep1 864.51813643396 864.51702993586 31.964 2 -0.6890390717381691 0.21091174280982694 1.0 ['ENSG00000198730|ENST00000361367|CTR9'] 126701 17837 VLPFLCIL True PC9_epitope_Rep3 916.54559705176 916.54448993586 73.806 2 -0.6890437604254331 0.21091174280982694 1.0 ['L1PA3_dup1120|chr2:110351377-110353837:-|1.2372248013512652|0.4358200479832063|1.51|529.0|156|3|anti-sense', 'L1PA3_dup1115|chr2:110017555-110020014:+|1.8409101932023448|0.4680770941019235|1.98|537.0|129|2|anti-sense'] 65082 8444 LQLLSSSDPPA True H1975_Epitope_Rep1 1126.58700383942 1126.5859099358602 37.408 2 -0.6890556429646791 0.21092373138863568 1.0 ['ENST00000417349.5_1_7:99716173-99716860:-|nuORF', 'ENST00000472616.1_1_7:139790896-139796717:-|nuORF'] 71683 6402 MEDALPPSL True PC9_epitope_Rep3 971.46338354943 971.46228993586 29.65 2 -0.6890832823626785 0.2109509123228149 1.0 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX'] 42743 11347 IELIKSGG True PC9_epitope_Rep1 815.47526856247 815.47416993586 48.524 2 -0.6891054309020961 0.21095649003403014 1.0 ['MAGI2|p.P1249Qfs*6|1|0.11|ENSG00000187391|chr7:78019937-78019937|G/-|frameshift_variant', 'nc|ENSG00000187391|Q86UL8-2|MAGI2', 'ENSG00000187391|ENST00000354212|MAGI2'] 94349 24668 RRRLLPRGAL True H1975_Epitope_Rep1 1206.7785420636199 1206.77689490379 102.2 3 -0.6891402213319785 0.21095649003403014 1.0 ['ENST00000252599.8_2_19:17666455-17670143:+|nuORF'] 63030 6734 LLPVWSQN True NCI_RA007_Epitope_Rep1 955.5127167003501 955.51160993586 30.205 2 -0.6892286914389643 0.21095649003403014 1.0 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 36930 16957 GVLRWQQRL True PC9_epitope_Rep6 1154.66726027914 1154.6661699358601 77.77 2 -0.6892869699636238 0.2109620672368481 1.0 ['ENST00000467936.5_1_3:45542057-45579920:+|nuORF', 'ENSG00000011376|ENST00000645846|LARS2'] 98109 10932 SESEEEQL True PC9_epitope_Rep5 949.3876353265298 949.38652993586 47.04 2 -0.6892899668193093 0.2109620672368481 1.0 ['ENST00000543938.5_1_15:83328314-83349061:-|nuORF', 'nc|ENSG00000103723|Q13367-3|AP3B2', 'nc|ENSG00000103723|Q13367|AP3B2', 'ENSG00000103723|ENST00000535359|AP3B2'] 22139 6950 ESRQRQSRMEK True H1975_Epitope_Rep3 1433.7157436765299 1433.71464993586 31.695 2 -0.6893395436808432 0.2109620672368481 1.0 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 83247 8112 PSYLLTCR True PC9_epitope_Rep1 951.48478770035 951.48368993586 36.029 2 -0.6896898561736307 0.21114115573919912 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 132939 25629 VVNIRNLIEK True PC9_epitope_Rep1 1196.72410644892 1196.7235749679298 103.61 1 -0.6897221798637159 0.21115313919397227 1.0 ['ENST00000395603.7_1_X:76939207-76939318:-|nuORF'] 100806 15040 SLEIEKLEQEK True H1975_Epitope_Rep1 1344.7136609045199 1344.71256993586 63.099 2 -0.6897425374049873 0.21118031292723682 1.0 ['CON__ENSEMBL:ENSBTAP00000034412'] 131139 7016 VTEHQASL True PC9_epitope_Rep4 883.43994568291 883.43884993586 34.234 2 -0.6897554038430355 0.2111890873739215 1.0 ['ENST00000261402.6_1_12:106532525-106533446:-|nuORF'] 108982 7485 TAGGERIFSA True NCI_RA007_Epitope_Rep1 1007.5036085686299 1007.50250993586 33.108 2 -0.6897637572657283 0.2111890873739215 1.0 ['ENSG00000188820|ENST00000368605|CALHM6'] 30741 3764 GALLEQPV True H1975_Epitope_Rep1 825.4596184983299 825.45852993586 19.031 2 -0.6897965490167671 0.211216259322832 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 82880 18826 PRVWSRLLGT True PC9_epitope_Rep5 1183.6825759901099 1183.68094490379 77.429 3 -0.6898756926407922 0.2112186156720385 1.0 ['ENST00000608694.1_1_7:129246743-129246839:-|nuORF'] 112662 14586 TLFQQEDVP True PC9_epitope_Rep1 1075.5185899264297 1075.51748993586 60.929 2 -0.6898809679075179 0.2112186156720385 1.0 ['ENST00000465931.1_1_9:134366565-134366628:+|nuORF'] 55086 12948 LAAAARRRW True PC9_epitope_Rep1 1069.62572982033 1069.6246299358602 54.676 2 -0.6899488117783116 0.2112186156720385 1.0 ['ENST00000514480.1_2_4:76439804-76440107:+|nuORF'] 36098 16994 GVAGGFIY True NCI_RA007_Epitope_Rep4 782.3962899657799 782.39574496793 73.646 1 -0.689950453991518 0.2112186156720385 1.0 ['ENST00000462374.1_1_1:235618964-235634205:-|nuORF', 'nc|ENSG00000162885|Q8NCR0-2|B3GALNT2', 'ENSG00000162885|ENST00000366600|B3GALNT2'] 100815 12507 SLEKEKTL True PC9_epitope_Rep6 946.53351171458 946.53240993586 59.535 2 -0.6899852239408838 0.2112609739056472 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 74205 8799 NEFLQLSLP True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 38.771 2 -0.6899918122482795 0.21126247209440066 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 65169 10558 LQPSLPHTGA True PC9_epitope_Rep5 1019.53999407735 1019.53888993586 45.6 2 -0.6900180384173333 0.21126247209440066 1.0 ['ENST00000397420.7_1_11:838599-838812:+|nuORF'] 44449 18469 ILKAHFSV True PC9_epitope_Rep1 913.53853752537 913.53744993586 75.833 2 -0.6900224538886865 0.21126247209440066 1.0 ['ENST00000368194.7_1_1:157014344-157014518:-|nuORF'] 136241 19724 WRVYLWPLSL True PC9_epitope_Rep3 1331.7390282370698 1331.7373949037901 81.096 3 -0.6900692225821697 0.21126247209440066 1.0 ['ENST00000371130.7_2_X:123780572-123780647:-|nuORF'] 88050 14080 QRQGRQRF True NCI_RA007_Epitope_Rep4 1074.5795079038996 1074.57840993586 61.443 2 -0.6900942798385294 0.21126247209440066 1.0 ['ENST00000512188.1_1_4:174320275-174324278:-|nuORF', 'ENST00000296506.7_1_4:174320275-174320425:-|nuORF'] 92052 16196 RKSRLGGP True H1975_Epitope_Rep2 869.5195334162897 869.51842993586 67.507 2 -0.690102437442231 0.21126247209440066 1.0 ['ENST00000251047.5_1_18:57022596-57022647:-|nuORF'] 36434 5892 GVGARVSWETP True NCI_RA007_Epitope_Rep3 1157.58292151849 1157.58127490379 30.152 3 -0.6901068669149144 0.21126247209440066 1.0 ['ENST00000372309.7_2_9:133998139-133998367:+|nuORF'] 100213 9354 SIVTMLMLML True PC9_epitope_Rep5 1150.61639611686 1150.6147349037901 40.935 3 -0.6901082942615281 0.21126247209440066 1.0 ['ENSG00000163527|ENST00000295770|STT3B'] 84957 6602 QEELKNRYQSF True NCI_RA007_Epitope_Rep1 1440.69974217588 1440.6986499358602 29.694 2 -0.6901147064343714 0.21126247209440066 1.0 ['ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'chr2:233691820-233693004|197|19.85|0.83|4.58|+|ENST00000441351|UGT1A6,UGT1A6'] 63737 10135 LNEARREHAK True NCI_RA007_Epitope_Rep1 1222.6530667669801 1222.65196993586 43.433 2 -0.6901369008927477 0.21127445024905844 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'ENST00000486060.1_1_6:31112443-31112875:-|nuORF'] 12216 7058 DIHPFLWRIKP True PC9_epitope_Rep4 1420.79794009552 1420.79629490379 34.411 3 -0.6901541567359677 0.21128321943811693 1.0 ['UNC5D|p.P758H|1|0.13|ENSG00000156687|chr8:35759429-35759429|C/A|missense_variant'] 14937 19970 DYENRLREMNR True H1975_Epitope_Rep1 1494.6997592592197 1494.6986699358602 83.119 2 -0.6901936072884958 0.21128321943811693 1.0 ['KIF21B|p.K712N|1|0.11|ENSG00000116852|chr1:200996337-200996337|C/A|missense_variant'] 2356 3815 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 19.769 2 -0.6902263129066518 0.21129519673201622 1.0 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 113472 4823 TLSTVQLAA True NCI_RA007_Epitope_Rep5 902.5072969667399 902.50618993586 25.238 2 -0.6902416056225855 0.211322359229788 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 106889 5374 SVDGSPVSP True H1975_Epitope_Rep2 843.39741216459 843.39630993586 25.711 2 -0.6902750546040693 0.21133112643119628 1.0 ['ENSG00000169047|ENST00000305123|IRS1'] 121400 18685 VEVSLGLPAL True PC9_epitope_Rep3 996.5855472874398 996.58444993586 77.092 2 -0.6902839492223225 0.21133112643119628 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 23519 20567 EVVNFLVP True PC9_epitope_Rep1 915.5065686907499 915.50546993586 83.924 2 -0.6903288580035309 0.21135828714600258 1.0 ['ENST00000521993.2_1_8:37597892-37607371:+|nuORF', 'nc|ENSG00000147475|O94905-2|ERLIN2', 'nc|ENSG00000147475|O94905-3|ERLIN2', 'ENSG00000147475|ENST00000519638|ERLIN2'] 84706 13639 QDLVSRERDYL True H1975_Epitope_Rep1 1392.69974217588 1392.6986499358602 57.595 2 -0.6903648351642656 0.21136705285694762 1.0 ['ENST00000540936.1_1_15:85144273-85147113:+|nuORF'] 96992 3583 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 18.705 2 -0.6903721197051368 0.21136705285694762 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 69585 9798 LVDLASTEKPP True H1975_Epitope_Rep3 1168.63395403184 1168.6328499358601 42.713 2 -0.6904411274829403 0.21137902760484678 1.0 ['WDR45B|p.S248Qfs*12|1|0.29|ENSG00000141580|chr17:82617359-82617360|GA/-|frameshift_variant', 'WDR45B|p.S249Afs*89|1|0.29|ENSG00000141580|chr17:82617357-82617357|T/-|frameshift_variant', 'ENSG00000141580|ENST00000392325|WDR45B', 'ENST00000573656.5_1_17:80576964-80583409:-|nuORF'] 87086 9967 QNLYNLLLMKL True NCI_RA007_Epitope_Rep2 1361.7740934164497 1361.77298993586 43.397 2 -0.6904698646340468 0.2113910019890979 1.0 ['ENST00000256367.2_1_14:71138881-71139001:+|nuORF'] 100905 10302 SLEWLEITK True H1975_Epitope_Rep3 1117.60192562757 1117.60082993586 44.68 2 -0.6905190740298762 0.21141815973276648 1.0 ['nc|ENSG00000154645|Q9H9P2-3|CHODL'] 25836 13320 FFFFFFFFLRW True NCI_RA007_Epitope_Rep1 1649.8223639382095 1649.82126993586 55.813 2 -0.6906372198647271 0.21144210622210075 1.0 ['AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|9|1|anti-sense'] 114216 16876 TPLTGNAATEE True PC9_epitope_Rep4 1102.51423282198 1102.5131299358602 72.894 2 -0.69065508897631 0.21144210622210075 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 75316 20116 NILSILVEL True PC9_epitope_Rep2 1012.6168474157199 1012.61574993586 82.785 2 -0.6906751038016871 0.2114692619528415 1.0 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1', 'AGTPBP1|p.Q781Hfs*20|1|0.13|ENSG00000135049|chr9:85596435-85596442|TGAGTGGT/-|frameshift_variant', 'ENST00000376080.2_1_9:88272482-88307688:-|nuORF', 'ENST00000376081.8_1_9:88270186-88327448:-|nuORF'] 135275 15359 WFRRFRQRLHP True NCI_RA007_Epitope_Rep2 1597.8854667436497 1597.8843699358601 64.441 2 -0.6907034241065515 0.21148123405805902 1.0 ['ENST00000243918.9_1_20:43991669-43991846:+|nuORF'] 81660 21389 PLLPAEPA True PC9_epitope_Rep2 806.4538048419 806.45270993586 87.743 2 -0.690754814409324 0.21150838837015107 1.0 ['ENST00000512731.5_1_1:1567737-1568735:+|nuORF', 'ENST00000234610.5_1_1:1631484-1633139:+|nuORF'] 86637 15896 QLFPPPPGTSL True PC9_epitope_Rep5 1152.6179100448799 1152.6168099358601 66.134 2 -0.6907583626455817 0.21151714819256986 1.0 ['nc|ENSG00000205696|A8MUL3|ADARB2-AS1'] 63495 7916 LLWYFYSALHR True NCI_RA007_Epitope_Rep1 1467.76630561407 1467.7646549037902 34.785 3 -0.6907640244128306 0.21151714819256986 1.0 ['ALG12|p.P269H|1|0.18|ENSG00000182858|chr22:49907907-49907907|G/T|missense_variant'] 61608 11899 LKLLPHQP True NCI_RA007_Epitope_Rep3 944.5807366905201 944.57962993586 53.94 2 -0.69080483597031 0.21152269621982694 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 111967 17562 TIQSDKFLN True PC9_epitope_Rep4 1064.5502244078798 1064.54912993586 75.57 2 -0.6908145938095018 0.21152269621982694 1.0 ['ENSG00000136052|ENST00000258538|SLC41A2'] 10546 23429 CLRPPNSS True NCI_RA007_Epitope_Rep5 872.4174364165201 872.41632993586 97.417 2 -0.6908278609323759 0.21152269621982694 1.0 ['ENST00000284073.6_1_17:55760166-55760262:+|nuORF'] 90173 11240 REDLVRDTP True PC9_epitope_Rep4 1099.56218607391 1099.56108993586 51.009 2 -0.690885753861489 0.21152824374174548 1.0 ['nc|ENSG00000142405|P59046-4|NLRP12', 'nc|ENSG00000142405|P59046-3|NLRP12', 'nc|ENSG00000142405|P59046-6|NLRP12', 'nc|ENSG00000142405|P59046-2|NLRP12', 'NLRP12|p.T1013Nfs*29|1|0.27|ENSG00000142405|chr19:53795919-53795920|-/T|frameshift_variant', 'ENSG00000142405|ENST00000324134|NLRP12', 'nc|ENSG00000142405|P59046-7|NLRP12'] 60728 25114 LHRFGRGL True NCI_RA007_Epitope_Rep1 954.5511678977398 954.55006993586 103.93 2 -0.6908868713884267 0.21152824374174548 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 125522 16100 VKEQQRQKEQK True NCI_RA007_Epitope_Rep1 1427.78447485935 1427.78336993586 66.731 2 -0.6909648807387535 0.21152824374174548 1.0 ['ENSG00000149548|ENST00000344762|CCDC15'] 44475 22433 ILLCMSLLLF True PC9_epitope_Rep1 1164.6650605614398 1164.6639699358602 91.11 2 -0.6909822027707134 0.21153291540808428 1.0 ['ENSG00000186160|ENST00000334194|CYP4Z1', 'nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P', 'nc|ENSG00000290456|Q8N1L4|CYP4Z2P'] 44924 12908 INTHILKVP True PC9_epitope_Rep2 1033.6284151589298 1033.62730993586 54.947 2 -0.6909856988110095 0.21153291540808428 1.0 ['ENSG00000197646|ENST00000397747|PDCD1LG2'] 44101 8647 IINKPTAA True PC9_epitope_Rep6 826.4912529797799 826.49014993586 43.087 2 -0.6910080318821316 0.21153291540808428 1.0 ['ENST00000442006.2_1_1:39174637-39175513:+|nuORF'] 95371 9083 RVWKMGCLGPV True H1975_Epitope_Rep1 1244.6522044619599 1244.6511099358602 39.842 2 -0.6910187144454999 0.21153291540808428 1.0 ['ENST00000264538.3_1_3:107941042-107941165:-|nuORF'] 64977 27289 LQFNNKRRLRR True PC9_epitope_Rep3 1499.8909460469097 1499.8893149037901 112.36 3 -0.6910415403677448 0.21153291540808428 1.0 ['nc|ENSG00000100298|Q6NTF7-4|APOBEC3H', 'APOBEC3H|p.W145Lfs*17|1|0.35|ENSG00000100298|chr22:39101931-39101932|-/T|frameshift_variant', 'nc|ENSG00000100298|Q6NTF7-2|APOBEC3H', 'ENSG00000100298|ENST00000442487|APOBEC3H', 'nc|ENSG00000100298|Q6NTF7|APOBEC3H', 'ENST00000474235.1_1_22:39496283-39496472:+|nuORF'] 37267 12158 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 54.943 2 -0.6910469200185245 0.21153291540808428 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 119650 15343 VAVATVHLVI True PC9_epitope_Rep2 1020.6331661861999 1020.63206993586 64.296 2 -0.691072910054588 0.21153291540808428 1.0 ['ENSG00000182858|ENST00000330817|ALG12'] 102210 8960 SLSAWLCETL True PC9_epitope_Rep2 1121.54269649929 1121.5415899358602 39.822 2 -0.6910806253592735 0.21153291540808428 1.0 ['ENST00000522362.6_1_8:26364258-26364426:-|nuORF'] 2852 8717 AEVEKWLG True H1975_Epitope_Rep2 930.4810822188998 930.47998993586 38.492 2 -0.6910913792770242 0.21154488327616042 1.0 ['nc|ENSG00000116984|Q99707-2|MTR', 'ENSG00000116984|ENST00000366577|MTR', 'ENST00000470570.1_1_1:237058450-237060941:+|nuORF'] 56510 14509 LDFLIIDKHE True H1975_Epitope_Rep1 1241.6655885132898 1241.66448993586 61.011 2 -0.6911224977759908 0.2115720292032846 1.0 ['ENST00000397042.7_1_20:37204556-37204643:+|nuORF'] 141048 7941 YSLRNKEVRET True NCI_RA007_Epitope_Rep1 1393.7313766573297 1393.7297249037902 34.881 3 -0.691202012705179 0.21159596266221448 1.0 ['OR6F1|p.T291S|1|0.21|ENSG00000169214|chr1:247711885-247711885|T/A|missense_variant'] 114458 10806 TPVSMAGPYS True PC9_epitope_Rep5 1008.4586325221599 1008.4580749679301 46.555 1 -0.6912143032075563 0.21159596266221448 1.0 ['ENST00000371712.3_1_9:139323637-139324123:-|nuORF'] 66856 8914 LSNEEYMYAY True H1975_Epitope_Rep1 1281.52235497753 1281.5212499358602 39.191 2 -0.6913002289297346 0.21160792884679597 1.0 ['RFX5|p.L207*|1|0.1|ENSG00000143390|chr1:151343819-151343819|G/-|frameshift_variant', 'RFX5|p.R468Afs*98|1|0.13|ENSG00000143390|chr1:151342636-151342636|C/-|frameshift_variant', 'ENSG00000143390|ENST00000452671|RFX5', 'ENST00000469513.5_1_1:151316885-151317631:-|nuORF'] 30197 6456 FYQRFRHFQYH True NCI_RA007_Epitope_Rep1 1627.77966426243 1627.77802490379 29.134 3 -0.6913239656481381 0.21163507216901664 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 119029 12080 VAFLQGLR True PC9_epitope_Rep6 902.5337864980999 902.53268993586 57.788 2 -0.6913872387776259 0.21166221466731422 1.0 ['ENSG00000177352|ENST00000321895|CCDC71'] 10631 8557 CPDQCSGHGTY True H1975_Epitope_Rep2 1166.4120933359 1166.41098993586 37.871 2 -0.6914270464819164 0.2116741793015526 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF', 'TENM3|p.R715Afs*61|1|0.07|ENSG00000218336|chr4:182688269-182688269|C/-|frameshift_variant', 'nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 120040 12570 VDSLETCQKLE True PC9_epitope_Rep1 1263.60166792739 1263.6005699358602 53.219 2 -0.6915470596327508 0.21170132038245562 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'SENP7|p.H452Lfs*5|1|0.16|ENSG00000138468|chr3:101364955-101364956|-/AGTAGTTTGA|frameshift_variant'] 108451 18875 SYLQLVEISR True PC9_epitope_Rep4 1206.6608374860198 1206.6597499358602 80.688 2 -0.69162027856593 0.21174363721904357 1.0 ['CON__P12763'] 135782 8801 WMRQEQIRFK True NCI_RA007_Epitope_Rep1 1420.7397735963998 1420.7386699358601 38.236 2 -0.6916909665237279 0.2117707764220239 1.0 ['nc|ENSG00000054523|O60333-3|KIF1B'] 49327 14034 KERRQREERRQ True H1975_Epitope_Rep1 1569.8560170901699 1569.8549299358601 59.145 2 -0.6917527411437786 0.21178273868240935 1.0 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'ENST00000490265.5_1_X:13771424-13787224:+|nuORF'] 24565 6233 FAGSASSLH True NCI_RA007_Epitope_Rep2 875.4137309350701 875.41262993586 28.851 2 -0.6917866824831672 0.21179470057971894 1.0 ['nc|ENSG00000156925|O60481-2|ZIC3', 'ENSG00000156925|ENST00000287538|ZIC3'] 141733 5435 YTWRWVWSWEW True NCI_RA007_Epitope_Rep4 1683.7622828627896 1683.76063490379 27.482 3 -0.6918302158899873 0.2118066621139692 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 38395 9278 HELRHRAQRVP True H1975_Epitope_Rep2 1397.7752475883299 1397.7741499358601 40.644 2 -0.6918944216065014 0.21186414956901783 1.0 ['ENST00000293780.4_1_17:4802527-4804189:-|nuORF'] 80391 6688 PGHRSQAPSHR True PC9_epitope_Rep5 1228.6173499646 1228.61569490379 30.698 3 -0.6919561923754156 0.2118728944732769 1.0 ['ENSG00000116824|ENST00000369478|CD2'] 68817 13991 LTLQTQQQL True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 58.887 2 -0.6919634604972934 0.2118728944732769 1.0 ['ENST00000354436.6_2_16:69711205-69718807:+|nuORF'] 12922 8436 DLKKMLENK True NCI_RA007_Epitope_Rep2 1117.6165301458898 1117.6154299358602 37.455 2 -0.6920381351455289 0.21187520864313678 1.0 ['ENSG00000171806|ENST00000310392|METTL18'] 57930 11720 LEGILRELKE True NCI_RA007_Epitope_Rep1 1198.6921376142998 1198.69104993586 49.564 2 -0.6920527142977716 0.21187520864313678 1.0 ['ENSG00000205363|ENST00000569673|INSYN1'] 18945 12738 ELEIRFSKDHK True H1975_Epitope_Rep3 1400.7412130650398 1400.7401099358601 54.207 2 -0.6920545969325275 0.21187520864313678 1.0 ['ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'nc|ENSG00000163214|Q6P158-3|DHX57', 'ENST00000479345.2_1_2:39084268-39090579:-|nuORF'] 12112 12339 DIAVELLQKA True NCI_RA007_Epitope_Rep2 1098.62847472858 1098.62736993586 52.601 2 -0.6920864755978939 0.21187520864313678 1.0 ['ENSG00000115649|ENST00000360507|CNPPD1', 'CNPPD1|p.V154Cfs*24|1|0.25|ENSG00000115649|chr2:219174829-219174830|-/C|frameshift_variant'] 66993 7687 LSPKELDEKN True NCI_RA007_Epitope_Rep1 1171.6084675599898 1171.60736993586 33.894 2 -0.6921492375004815 0.21187752253209116 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 60445 19921 LGVPGVLLPDP True PC9_epitope_Rep5 1075.62774645259 1075.62664993586 81.681 2 -0.6921564270491578 0.21187752253209116 1.0 ['ENST00000541078.6_1_17:79828535-79828592:-|nuORF'] 82055 21202 PLYLLQFN True NCI_RA007_Epitope_Rep1 1006.5487678559 1006.5481749679301 86.748 1 -0.6921616510471282 0.21187752253209116 1.0 ['nc|ENSG00000174842|Q92990-2|GLMN', 'ENSG00000174842|ENST00000370360|GLMN'] 21462 12021 ERKYYYYERHR True NCI_RA007_Epitope_Rep1 1661.80627293309 1661.8046249037898 50.746 3 -0.6921730852876392 0.21187752253209116 1.0 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 128975 11334 VQKLIVYPP True H1975_Epitope_Rep1 1055.6379172134698 1055.63682993586 48.575 2 -0.6922174089657624 0.21188948063179935 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'nc|ENSG00000138468|Q9BQF6-4|SENP7'] 71382 22591 LYSCFIVFVTI True PC9_epitope_Rep1 1303.6886324569898 1303.68752993586 91.703 2 -0.6922871809925595 0.21194052495827645 1.0 ['nc|ENSG00000280055|Q8N9X5|LINC02912'] 65706 6553 LSAVGTFTWVC True NCI_RA007_Epitope_Rep1 1182.57433098074 1182.5732299358601 29.504 2 -0.6922988317579811 0.21194052495827645 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ENST00000574224.1_1_16:16108407-16150188:+|nuORF'] 63535 12049 LMAEGGMTAVV True NCI_RA007_Epitope_Rep3 1077.51985287973 1077.5187499358601 54.517 2 -0.6923172590009355 0.21194052495827645 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1'] 114466 11529 TPWERLWFLLL True NCI_RA007_Epitope_Rep3 1472.81800683376 1472.8163549037902 52.475 3 -0.692329211787331 0.21195248137640152 1.0 ['ENST00000528031.1_1_11:75167699-75188792:-|nuORF', 'ENSG00000158555|ENST00000336898|GDPD5'] 111671 15325 TIENFHVV True PC9_epitope_Rep5 957.49198125577 957.49088993586 63.958 2 -0.6924956108538021 0.21199156463823524 1.0 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 56931 9895 LDQKMQQP True PC9_epitope_Rep3 986.4855159763399 986.48440993586 43.017 2 -0.6925023344119178 0.21199156463823524 1.0 ['ENSG00000169330|ENST00000305428|MINAR1'] 98561 15256 SFQLKTCA True H1975_Epitope_Rep3 896.4425885352 896.44203496793 64.089 1 -0.69251962186264 0.2120035197378402 1.0 ['ENST00000349995.9_1_13:46039340-46050363:+|nuORF'] 6056 17228 APLLKRWEQLL True H1975_Epitope_Rep1 1365.81325580649 1365.8121499358601 71.729 2 -0.6925705602043534 0.21202099578263903 1.0 ['SPTA1|p.A2012P|1|0.17|ENSG00000163554|chr1:158623069-158623069|C/G|missense_variant'] 81812 13195 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 55.617 2 -0.6925778277215576 0.21202099578263903 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 35400 7371 GSDFDC[Carbamidomethyl]ELR True H1975_Epitope_Rep3 1097.4447736425998 1097.44366993586 33.33 2 -0.6925849258060844 0.21202099578263903 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 136260 19469 WRWSRAVP True PC9_epitope_Rep3 1056.5617325814399 1056.56062993586 80.116 2 -0.6925856858058441 0.21202099578263903 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 34331 20103 GPAVFLVAA True PC9_epitope_Rep4 843.4854393233499 843.48434993586 85.461 2 -0.6926520558808641 0.21207845992809357 1.0 ['ENSG00000119899|ENST00000355773|SLC17A5'] 12803 13775 DLFHTIETL True PC9_epitope_Rep3 1087.55497543515 1087.5538699358601 58.066 2 -0.6926646506507453 0.2120807608877023 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 114284 11198 TPPPGLASA True PC9_epitope_Rep5 809.42831837005 809.4272299358599 48.061 2 -0.6926776461734313 0.2120807608877023 1.0 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 38671 20449 HFSLPHTYS True PC9_epitope_Rep4 1087.50869394907 1087.50758993586 86.801 2 -0.6926829474091986 0.2120807608877023 1.0 ['ENST00000555997.1_1_14:69255564-69255801:-|nuORF'] 63049 6053 LLQEDIRRHRN True NCI_RA007_Epitope_Rep1 1448.7960426025597 1448.7943949037901 27.584 3 -0.6926957695012885 0.2120807608877023 1.0 ['ENST00000511797.5_1_4:2869713-2869782:+|nuORF'] 64867 9205 LQDSFEYINQ True H1975_Epitope_Rep3 1255.57208205127 1255.57098993586 40.4 2 -0.692777438394187 0.2121230507857533 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'ENST00000504704.6_1_4:159690364-159754995:+|nuORF'] 112044 5473 TISSKSHSPSP True H1975_Epitope_Rep1 1126.5618517207402 1126.56074993586 26.112 2 -0.6927989617844901 0.21212534886542894 1.0 ['ENSG00000132122|ENST00000371847|SPATA6', 'nc|ENSG00000132122|Q9NWH7-2|SPATA6', 'ENST00000463938.5_1_1:48864995-48878812:-|nuORF'] 27704 19162 FPLTCRLWLW True PC9_epitope_Rep5 1333.7005345533698 1333.69888490379 78.743 3 -0.6928119900373783 0.21212534886542894 1.0 ['ENST00000337318.7_2_10:126308405-126308534:-|nuORF'] 32429 10803 GFVFGCGTL True PC9_epitope_Rep3 899.4211248146299 899.42002993586 46.521 2 -0.6928182426821159 0.21212534886542894 1.0 ['ENSG00000116237|ENST00000343813|ICMT'] 67885 4524 LTATRKSTL True NCI_RA007_Epitope_Rep4 989.58694426977 989.58584993586 23.796 2 -0.6928352591850598 0.21212534886542894 1.0 ['LPP|p.K176R|1|0.47|ENSG00000145012|chr3:188609258-188609258|A/G|missense_variant'] 58580 4585 LEQNNFSPNTR True NCI_RA007_Epitope_Rep2 1318.6265772356198 1318.62493490379 22.46 3 -0.692914842583108 0.21218280271200837 1.0 ['ENSG00000205809|ENST00000381902|KLRC2'] 103329 18864 SPLWLGEAGP True PC9_epitope_Rep1 1025.5181960036098 1025.5170899358602 77.346 2 -0.6929338327411361 0.21219475200970728 1.0 ['ENST00000555147.1_1_16:89984433-89984928:+|nuORF'] 25105 4094 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 22.63 2 -0.6929450597196829 0.21220670094492727 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 139944 5919 YQAQDVGT True PC9_epitope_Rep6 880.3926611373199 880.39156993586 31.042 2 -0.6929799761384569 0.21221543081613153 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 39785 20219 HMAVAFVL True PC9_epitope_Rep5 886.4734947406599 886.47238993586 82.819 2 -0.6929891241308707 0.21221543081613153 1.0 ['ENSG00000164919|ENST00000520468|COX6C'] 56655 8067 LDIRNSEY True PC9_epitope_Rep1 1008.48762415132 1008.48652993586 35.854 2 -0.6930132702445708 0.2122361077408396 1.0 ['nc|ENSG00000147724|Q49AJ0-2|FAM135B', 'ENST00000482951.6_1_8:139144838-139379577:-|nuORF', 'ENSG00000147724|ENST00000395297|FAM135B', 'FAM135B|p.S387I|1|0.14|ENSG00000147724|chr8:138167993-138167993|C/A|missense_variant', 'FAM135B|p.L707Ffs*22|1|0.13|ENSG00000147724|chr8:138152354-138152354|C/-|frameshift_variant', 'nc|ENSG00000147724|Q49AJ0-3|FAM135B', 'nc|ENSG00000147724|Q49AJ0-4|FAM135B', 'FAM135B|p.R1232Pfs*31|1|0.32|ENSG00000147724|chr8:138141293-138141294|-/G|frameshift_variant'] 72368 12129 MIVVDNKSC True H1975_Epitope_Rep1 1007.47798806775 1007.47688993586 51.67 2 -0.6930182755690629 0.2122361077408396 1.0 ['TRIM3|p.I589M|1|0.08|ENSG00000110171|chr11:6450995-6450995|G/C|missense_variant'] 18171 12877 EIKVYWNAP True PC9_epitope_Rep2 1118.5760452328998 1118.57494993586 54.83 2 -0.6930354308221224 0.2122361077408396 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 31883 18167 GELLTQKPLFP True PC9_epitope_Rep2 1241.7019740220098 1241.70086993586 75.183 2 -0.6930667404427399 0.2122448360581152 1.0 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF'] 111311 9461 THMTAIVGM-[Oxidation] True PC9_epitope_Rep5 975.4517737003499 975.45066993586 41.347 2 -0.6931170040975156 0.2122448360581152 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 32422 12554 GFSRPQLMTL True PC9_epitope_Rep4 1148.60121443492 1148.59957490379 56.111 3 -0.6931422378220873 0.21225678278408833 1.0 ['C16orf52-OTOA|1|fusion', 'nc|ENSG00000155719|Q7RTW8-3|OTOA', 'ENST00000563506.1_1_16:21742071-21771858:+|nuORF', 'nc|ENSG00000155719|Q7RTW8-2|OTOA', 'nc|ENSG00000155719|Q7RTW8-4|OTOA', 'ENSG00000155719|ENST00000646100|OTOA', 'nc|ENSG00000155719|Q7RTW8|OTOA'] 135508 1025 WKERILKAK True NCI_RA007_Epitope_Rep1 1170.7237125260997 1170.7220549037902 5.4302 3 -0.6931870610460833 0.21231100529261007 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 84383 9336 QAAELVTQNC True PC9_epitope_Rep5 1075.49680893603 1075.49570993586 40.864 2 -0.6932065360622406 0.21231100529261007 1.0 ['ENST00000480357.5_1_2:239002459-239002759:+|nuORF'] 99857 20539 SILKNYDI True PC9_epitope_Rep2 964.52294703088 964.52184993586 84.437 2 -0.6933743216089099 0.21238360983894938 1.0 ['ENST00000302103.5_1_6:96561989-96651204:+|nuORF'] 121736 13840 VFLPLHWFP True PC9_epitope_Rep1 1154.62768688294 1154.62658993586 58.079 2 -0.693416328275735 0.21240427629084843 1.0 ['ENST00000515684.1_1_4:48712603-48782104:-|nuORF'] 98267 14352 SEVFHVNISL True PC9_epitope_Rep4 1143.59242357303 1143.5913299358601 63.111 2 -0.6934212440107852 0.21240427629084843 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant'] 118980 17573 VAEEHAPSIM True PC9_epitope_Rep6 1082.50664534374 1082.50554993586 80.234 2 -0.6934500142943149 0.21240427629084843 1.0 ['ENST00000423961.1_1_7:27502029-27502443:+|nuORF'] 83439 13257 PTNLKPSKIKQ True NCI_RA007_Epitope_Rep5 1252.7503211967598 1252.74922993586 57.672 2 -0.6935551100342965 0.2124617110969581 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 127564 5135 VNSKAGTP True NCI_RA007_Epitope_Rep1 772.40791727864 772.40682993586 24.057 2 -0.6935826089933662 0.2124888167771089 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'ENST00000496360.5_1_1:39934274-39950491:+|nuORF'] 132720 25141 VVHRGRPG True PC9_epitope_Rep2 876.5042177053199 876.50366496793 102.37 1 -0.6936074302477503 0.2124975359747684 1.0 ['ENSG00000129911|ENST00000250916|KLF16'] 85393 10225 QEVGYSIRFED True NCI_RA007_Epitope_Rep5 1341.62009487285 1341.61898993586 45.963 2 -0.6936143408297987 0.2124975359747684 1.0 ['ENSG00000109606|ENST00000336812|DHX15', 'DHX15|p.N745Efs*23|1|0.16|ENSG00000109606|chr4:24529639-24529640|-/T|frameshift_variant', 'DHX15|p.P597Hfs*19|1|0.12|ENSG00000109606|chr4:24537170-24537170|G/-|frameshift_variant', 'DHX15|p.N647Hfs*2|1|0.18|ENSG00000109606|chr4:24533022-24533026|AGTTG/-|frameshift_variant'] 53799 10576 KTDIYDEN True H1975_Epitope_Rep2 996.44000525256 996.43890993586 45.703 2 -0.6937228562191571 0.21253335759340125 1.0 ['ENSG00000172139|ENST00000305815|SLC9C1', 'nc|ENSG00000172139|Q4G0N8-2|SLC9C1'] 123351 12751 VGLTVRRF True H1975_Epitope_Rep3 946.5712346359799 946.57012993586 54.26 2 -0.6937372804628307 0.21253335759340125 1.0 ['ENST00000475975.5_1_22:30758047-30767232:+|nuORF', 'ENSG00000187860|ENST00000338306|CCDC157'] 136001 12394 WQRYQHRVRRA True H1975_Epitope_Rep1 1554.83924482722 1554.8381499358602 52.707 2 -0.6937414097808368 0.21253335759340125 1.0 ['ENSG00000166856|ENST00000300098|GPR182'] 37302 9474 GVSAATFLK True NCI_RA007_Epitope_Rep5 892.50181766348 892.50072993586 43.075 2 -0.6940149874193284 0.21273918185401947 1.0 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL'] 11405 6080 DETEHPVP True NCI_RA007_Epitope_Rep2 922.4032258210199 922.40212993586 28.257 2 -0.6940282571643848 0.21273918185401947 1.0 ['ENSG00000164715|ENST00000297293|LMTK2'] 19919 11200 ELVEDRFR True PC9_epitope_Rep4 1062.5458077337798 1062.54470993586 50.858 2 -0.6940818982097504 0.2127478925344169 1.0 ['nc|ENSG00000181827|Q2KHR2-1|RFX7', 'nc|ENSG00000181827|Q2KHR2-2|RFX7', 'ENSG00000181827|ENST00000559447|RFX7'] 103489 3986 SPQQAEVSPDA True H1975_Epitope_Rep3 1127.50948179471 1127.5083899358601 20.458 2 -0.6940947718154952 0.2127478925344169 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 61836 5697 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 27.299 2 -0.6941134673419307 0.21275982837303092 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 111741 14581 TIHNITPGDA True PC9_epitope_Rep5 1037.5141732523298 1037.5130699358601 61.087 2 -0.6941648279005811 0.21277176384972254 1.0 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5'] 4277 18591 AIGAVIHYL True PC9_epitope_Rep2 955.54910220907 955.54800993586 76.862 2 -0.6942320063870592 0.21278369896450824 1.0 ['nc|ENSG00000020129|Q9UBB6-2|NCDN', 'ENSG00000020129|ENST00000373243|NCDN'] 41277 20538 HVPKSYRRRRR True NCI_RA007_Epitope_Rep5 1509.8865293728097 1509.8854299358602 85.94 2 -0.6942972605344595 0.21279563371740448 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4'] 56779 15155 LDLWEFFCRKK True H1975_Epitope_Rep3 1483.7645913619097 1483.7634899358602 63.695 2 -0.6943726658206366 0.21286175583281536 1.0 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'ENST00000476985.5_1_12:3921210-3931106:-|nuORF', 'nc|ENSG00000111224|Q9NR21-2|PARP11'] 63863 10356 LNLSDLLAV True PC9_epitope_Rep3 956.5542471591599 956.55314993586 44.777 2 -0.6943737773712935 0.21286175583281536 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 18951 9761 ELEKKDGAL True PC9_epitope_Rep5 1001.5393253710098 1001.53822993586 42.517 2 -0.6943759696454644 0.21286175583281536 1.0 ['ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 24958 11228 FDAVITPVLNP True H1975_Epitope_Rep1 1184.6441247927198 1184.64302993586 48.162 2 -0.6944566739751211 0.21288562116273782 1.0 ['ENSG00000184140|ENST00000328882|OR4F6'] 115873 7739 TSEKLEGKEP True H1975_Epitope_Rep2 1116.5662683948399 1116.56516993586 34.72 2 -0.6944780335145201 0.21288562116273782 1.0 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 4908 19731 ALFPVPEGAP True PC9_epitope_Rep1 996.5280324113198 996.52692993586 80.723 2 -0.694530883056446 0.21297334990752811 1.0 ['nc|ENSG00000185787|Q9UBU8|MORF4L1'] 111984 5761 TIRDYGKEP True H1975_Epitope_Rep2 1077.5454733806098 1077.54436993586 27.155 2 -0.6945475811935473 0.21297882338674226 1.0 ['ENST00000498712.5_1_8:67383822-67386037:+|nuORF'] 131244 22896 VTFALNWM True PC9_epitope_Rep4 980.47897404392 980.47786993586 96.289 2 -0.6945551574374088 0.21297882338674226 1.0 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'ENST00000502426.5_1_17:48755439-48768558:+|nuORF'] 60065 10737 LGLGNQSPSL True PC9_epitope_Rep2 984.5240096600401 984.52290993586 46.619 2 -0.6945667308866831 0.21297882338674226 1.0 ['ENST00000559184.5_1_15:47477943-47533566:+|nuORF'] 30360 11185 GADCPPSSVP True PC9_epitope_Rep1 928.3960322656 928.39492993586 47.907 2 -0.6945825963055147 0.21298752482151248 1.0 ['ENST00000261596.8_1_18:2919184-2919304:-|nuORF'] 62611 22775 LLLCLLPLAP True PC9_epitope_Rep2 1064.6667748136 1064.66566993586 93.093 2 -0.6945841162764628 0.21298752482151248 1.0 ['ENSG00000126243|ENST00000246529|LRFN3'] 117407 11125 TVPQPSWL True PC9_epitope_Rep6 926.48616759934 926.48506993586 53.731 2 -0.6945882723283101 0.21299945431395137 1.0 ['ENST00000530220.1_1_19:10461512-10463916:-|nuORF'] 37461 6733 GVTRTEFPILF True NCI_RA007_Epitope_Rep4 1278.6972229947398 1278.69556490379 32.52 3 -0.6946432209385397 0.21303102408269048 1.0 ['ENST00000394518.6_1_15:86290571-86290709:+|nuORF'] 68539 17674 LTGIKGEPG True PC9_epitope_Rep6 870.4810822188998 870.47998993586 80.62 2 -0.6946460337550501 0.21303102408269048 1.0 ['COL25A1|p.P337T|1|0.13|ENSG00000188517|chr4:108884189-108884189|G/T|missense_variant'] 62362 18196 LLGPMDEPV True PC9_epitope_Rep1 969.4841189940099 969.48302993586 74.781 2 -0.694657173041166 0.21303102408269048 1.0 ['ENSG00000103489|ENST00000261381|XYLT1'] 139627 16488 YMDSRRDF True NCI_RA007_Epitope_Rep5 1088.4709285413599 1088.4698299358602 70.18 2 -0.6946591386541849 0.21303102408269048 1.0 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.T551Pfs*27|1|0.19|ENSG00000171298|chr17:80111991-80111991|G/-|frameshift_variant', 'GAA|p.D406Y|1|0.21|ENSG00000171298|chr17:80108718-80108718|G/T|missense_variant', 'GAA|p.V466Ffs*11|1|0.16|ENSG00000171298|chr17:80110009-80110009|G/-|frameshift_variant', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 80836 7967 PHQPLLSQR True NCI_RA007_Epitope_Rep4 1074.59342663254 1074.59232993586 37.398 2 -0.6946985003075298 0.21303102408269048 1.0 ['ENST00000296666.12_1_5:126862366-126866010:+|nuORF'] 20023 7175 ELYREKYDWRR True NCI_RA007_Epitope_Rep1 1612.8110239603598 1612.80881987172 31.898 4 -0.6947069612594188 0.21303102408269048 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 4550 2088 AKKKKKKKKG True PC9_epitope_Rep1 1170.8288463009796 1170.82720490379 11.485 3 -0.6947266621858237 0.21303102408269048 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 63976 14170 LNVISPTRSL True PC9_epitope_Rep1 1098.63970811862 1098.6386099358601 59.328 2 -0.6947422984828917 0.21303102408269048 1.0 ['ENST00000373768.3_1_9:124914566-124914674:-|nuORF'] 113544 13871 TLTQNQAFSL True PC9_epitope_Rep4 1121.5716881284498 1121.5705899358602 61.256 2 -0.6947500447815034 0.21303102408269048 1.0 ['ENSG00000150627|ENST00000508596|WDR17', 'nc|ENSG00000150627|Q8IZU2|WDR17'] 94312 20919 RRRKKRHPQR True NCI_RA007_Epitope_Rep2 1416.8762990422797 1416.87520993586 86.524 2 -0.6947996424210868 0.21303972235272722 1.0 ['ENST00000338745.10_3_3:18466531-18466693:-|nuORF', 'ENST00000450898.1_1_3:18465198-18466693:-|nuORF'] 65911 18498 LSDPSITKL True PC9_epitope_Rep2 972.5491617787201 972.54806993586 76.488 2 -0.6948339933384108 0.21303972235272722 1.0 ['ENST00000478344.6_1_9:140240296-140248823:-|nuORF', 'nc|ENSG00000187609|Q8N9H8-2|EXD3', 'ENST00000487745.5_1_9:140201404-140247406:-|nuORF', 'ENSG00000187609|ENST00000340951|EXD3', 'nc|ENSG00000187609|Q8N9H8-3|EXD3', 'ENST00000491734.6_1_9:140201404-140249090:-|nuORF'] 83408 9837 PTLEFEYGD True PC9_epitope_Rep4 1069.46040634397 1069.4593099358601 45.487 2 -0.6948755241170523 0.21309711445198837 1.0 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 136728 14085 WYFWRRHVFIW True NCI_RA007_Epitope_Rep1 1694.8622716875798 1694.86063490379 58.817 3 -0.6948974399188719 0.21312419489277867 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 114470 12675 TPWPRGRLLTA True PC9_epitope_Rep4 1266.71968977482 1266.7180349037899 56.599 3 -0.6949223323874884 0.21314804431175838 1.0 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 34961 22294 GQRLPVEDFSL True PC9_epitope_Rep2 1259.6510010783097 1259.64990993586 91.231 2 -0.6949367737329668 0.21314804431175838 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 55156 11114 LAAIRDASRPP True H1975_Epitope_Rep3 1165.6567551650899 1165.65564993586 47.845 2 -0.6949951736484261 0.21317512274959083 1.0 ['ENST00000342085.8_1_16:2647774-2647957:+|nuORF'] 129181 3101 VQSIYHFYQK True NCI_RA007_Epitope_Rep1 1311.6611718391898 1311.65953490379 15.951 3 -0.6950073880014165 0.2132022003667278 1.0 ['ENST00000328965.8_2_11:120100260-120100626:+|nuORF'] 119719 6112 VAVVAHGP True NCI_RA007_Epitope_Rep3 748.4231734199599 748.42206993586 31.03 2 -0.695055561532478 0.21321412335202303 1.0 ['ENSG00000130147|ENST00000392011|SH3BP4', 'nc|ENSG00000130147|Q9P0V3-2|SH3BP4'] 60800 21772 LHSLSYHPAL True PC9_epitope_Rep5 1136.5978433066402 1136.59674993586 88.776 2 -0.695105035606583 0.21322604597596642 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant', 'BIRC6|p.K712Sfs*9|1|0.29|ENSG00000115760|chr2:32415422-32415422|C/-|frameshift_variant'] 102252 7252 SLSHGLPP True NCI_RA007_Epitope_Rep4 806.42865272322 806.42754993586 34.53 2 -0.6951660980038453 0.2132434275323888 1.0 ['nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1', 'ENST00000514596.1_1_4:1206030-1206831:-|nuORF'] 69145 8187 LTRQNQEL True PC9_epitope_Rep4 1000.5301576696398 1000.52906993586 38.951 2 -0.6951671744112037 0.2132434275323888 1.0 ['nc|ENSG00000089847|Q8TF21-2|ANKRD24', 'ENSG00000089847|ENST00000318934|ANKRD24'] 105266 15290 SRLFYKVAS True PC9_epitope_Rep4 1069.5920296502097 1069.59092993586 66.742 2 -0.6951768890128724 0.2132434275323888 1.0 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'ENST00000593534.1_1_19:8669890-8670235:-|nuORF', 'ADAMTS10|p.S568Vfs*4|1|0.5|ENSG00000142303|chr19:8591990-8591991|-/G|frameshift_variant'] 96137 4669 RYPALREK True NCI_RA007_Epitope_Rep3 1031.5876129761098 1031.58650993586 25.3 2 -0.6951785311244242 0.2132434275323888 1.0 ['nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF'] 80574 21240 PGPSGAQAAV True PC9_epitope_Rep1 853.4293809992099 853.42883496793 86.523 1 -0.6952690946016248 0.21325434463114196 1.0 ['ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2'] 37266 12033 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 54.457 2 -0.6952728285337056 0.21325434463114196 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 86274 20576 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 85.236 3 -0.6952956651091088 0.21325434463114196 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 19942 13152 ELVKSHSFY True H1975_Epitope_Rep2 1108.5553097883198 1108.5542099358602 55.711 2 -0.6953380888867965 0.21325434463114196 1.0 ['ENST00000428182.2_1_12:15408356-15408710:-|nuORF'] 93943 23482 RRHCRHRRRRR True PC9_epitope_Rep1 1643.9464613741097 1643.94536993586 95.109 2 -0.6953527757061667 0.21325434463114196 1.0 ['ENST00000361078.6_1_2:20550380-20550560:-|nuORF'] 3039 7171 AFQPDTLSQP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 32.604 2 -0.695401136232695 0.21325434463114196 1.0 ['ENSG00000215474|ENST00000425639|SKOR2', 'nc|ENSG00000215474|Q2VWA4-2|SKOR2'] 68814 18818 LTLQLTTV True PC9_epitope_Rep6 887.5327834385901 887.53168993586 85.026 2 -0.6955222360441392 0.21327071655809726 1.0 ['nc|ENSG00000279847|E5RJ46|LINC02906'] 126248 8661 VLGTVSSVVVP True H1975_Epitope_Rep1 1055.6226610721499 1055.6215699358602 38.243 2 -0.6955270926343551 0.21327071655809726 1.0 ['ENST00000397656.8_1_12:111066004-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-4|TCTN1', 'ENST00000495659.6_1_12:111052207-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-3|TCTN1', 'nc|ENSG00000204852|Q2MV58|TCTN1', 'ENSG00000204852|ENST00000397659|TCTN1', 'nc|ENSG00000204852|Q2MV58-6|TCTN1', 'nc|ENSG00000204852|Q2MV58-5|TCTN1'] 75917 18014 NLRELWSL True PC9_epitope_Rep3 1029.56072952193 1029.5596299358601 74.494 2 -0.6955306588255733 0.21327071655809726 1.0 ['ENSG00000225830|ENST00000355832|ERCC6'] 65076 20561 LQLKEKKREKT True H1975_Epitope_Rep3 1399.8510978671898 1399.84945490379 85.939 3 -0.6955458619157758 0.21327071655809726 1.0 ['nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 46393 6185 ISSARAPVP True H1975_Epitope_Rep3 896.5079656730799 896.50686993586 28.803 2 -0.6955580480570097 0.21327071655809726 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1', 'ENSG00000162419|ENST00000373816|GMEB1'] 135571 18902 WKWFKHIIRFI True NCI_RA007_Epitope_Rep5 1572.9081592508398 1572.9070699358601 79.55 2 -0.6955946936619201 0.21327071655809726 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 24549 20002 FAGIACAPVL True PC9_epitope_Rep5 960.5102741722 960.50916993586 81.991 2 -0.695614875415684 0.21327071655809726 1.0 ['ENSG00000167487|ENST00000300976|KLHL26'] 138180 4685 YGNSLSAILE True NCI_RA007_Epitope_Rep2 1065.53423999057 1065.5331499358601 22.851 2 -0.6956210589204849 0.21327071655809726 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 129105 11766 VQQEACAQ True H1975_Epitope_Rep3 875.3807165546298 875.38016496793 50.403 1 -0.6956336802087831 0.21327071655809726 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40'] 26998 15240 FLENTGQLNKC True PC9_epitope_Rep3 1265.60742201417 1265.60578490379 63.768 3 -0.6957425173073064 0.21330970126643642 1.0 ['ENST00000342505.4_1_1:65349154-65432039:-|nuORF'] 58447 18003 LEPLHILSKL True PC9_epitope_Rep3 1161.7121447828902 1161.71050490379 74.453 3 -0.6957610925954355 0.21330970126643642 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 19843 12048 ELSVDHSDP True H1975_Epitope_Rep2 997.43525422529 997.43414993586 51.422 2 -0.6957783967619032 0.21333353531069166 1.0 ['ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5'] 113372 15611 TLRVRCRRIF True PC9_epitope_Rep1 1318.7768278114597 1318.7751749037902 64.867 3 -0.695790573892841 0.21333353531069166 1.0 ['ENST00000438676.1_1_6:75994738-75994903:+|nuORF'] 36943 11895 GVLTVHCMV True PC9_epitope_Rep5 957.4775941449299 957.47648993586 50.751 2 -0.6958756043549977 0.21337574793607514 1.0 ['nc|ENSG00000186334|Q495N2-3|SLC36A3', 'ENSG00000186334|ENST00000335230|SLC36A3', 'nc|ENSG00000186334|Q495N2-2|SLC36A3'] 32424 16282 GFTGDGFT True PC9_epitope_Rep5 800.33408363204 800.3335349679301 67.622 1 -0.6958938483656848 0.2133995788963449 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.C1447R|1|0.34|ENSG00000138829|chr5:128330579-128330579|A/G|missense_variant'] 3508 11653 AGLPCAFFAPV True PC9_epitope_Rep2 1091.54738795691 1091.5462899358602 50.153 2 -0.6959017378299566 0.2133995788963449 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 40357 24000 HQRLIFRLLKL True H1975_Epitope_Rep3 1435.9139729072697 1435.91286993586 100.02 2 -0.6959688310047373 0.2134504695546804 1.0 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5'] 82045 14098 PLWYWRMPL True PC9_epitope_Rep2 1260.6477707045199 1260.6461249037902 59.502 3 -0.6959818764657564 0.2134504695546804 1.0 ['ENST00000389341.9_1_19:42594034-42594316:-|nuORF'] 55629 16110 LAKAIAAWKL True PC9_epitope_Rep1 1083.68045073179 1083.67934993586 66.784 2 -0.6959829464254783 0.2134504695546804 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'ENST00000461624.1_1_1:158592769-158604434:-|nuORF'] 82743 23397 PRIRYRKKKRI True PC9_epitope_Rep6 1512.9841181557597 1512.98248490379 103.1 3 -0.6959960111090195 0.21347752987685736 1.0 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 43157 8533 IFEHIYSV True H1975_Epitope_Rep1 1006.51238234718 1006.51128993586 37.75 2 -0.6960376627314728 0.2134894429129684 1.0 ['THAP6|p.S141I|1|0.36|ENSG00000174796|chr4:75526967-75526967|G/T|missense_variant'] 110822 6465 TGNVQFNEK True NCI_RA007_Epitope_Rep3 1035.49852318819 1035.49742993586 32.461 2 -0.6961088343594921 0.2135251798561151 1.0 ['nc|ENSG00000155511|P42261-3|GRIA1', 'nc|ENSG00000155511|P42261-4|GRIA1', 'nc|ENSG00000155511|P42261-2|GRIA1', 'ENSG00000155511|ENST00000285900|GRIA1', 'nc|ENSG00000155511|P42261-6|GRIA1', 'nc|ENSG00000155511|P42261-5|GRIA1', 'ENST00000481559.6_1_5:152869375-153085697:+|nuORF'] 25106 4376 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 23.985 2 -0.6961250992087455 0.2135251798561151 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 101270 12418 SLIAPGSLNAA True PC9_epitope_Rep1 1012.55530978832 1012.55420993586 52.628 2 -0.6961347167155103 0.2135251798561151 1.0 ['ENSG00000172478|ENST00000388934|MAB21L4'] 125841 24318 VLAELLILS True PC9_epitope_Rep1 969.61103375929 969.60992993586 98.369 2 -0.6961445211324783 0.21353709144882319 1.0 ['ENST00000394715.1_1_14:64969481-64971219:-|nuORF'] 135487 5742 WILWYHWMRGR True NCI_RA007_Epitope_Rep1 1602.8030425593 1602.80140490379 26.393 3 -0.6961894481279031 0.21357929331939965 1.0 ['ENST00000464699.5_1_2:27666013-27666819:+|nuORF'] 52795 8781 KNNLEETAFDI True PC9_epitope_Rep5 1292.62484590012 1292.6237499358601 38.718 2 -0.6962722922747779 0.21360311378333763 1.0 ['ENSG00000168876|ENST00000544612|ANKRD49'] 125112 15348 VIFFFFFWYFR True NCI_RA007_Epitope_Rep1 1617.8172785577697 1617.8161899358602 63.778 2 -0.6962748114929869 0.21360311378333763 1.0 ['ENST00000316423.10_1_4:39501678-39501759:-|nuORF'] 107071 6081 SVGSTLQPP True H1975_Epitope_Rep3 884.46034677432 884.45924993586 28.403 2 -0.6963657648690927 0.21363016810540664 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 75566 19031 NLCLILLLN True PC9_epitope_Rep3 1027.60998821347 1027.6088899358601 78.423 2 -0.6964545955955798 0.2136400115080026 1.0 ['ENST00000390006.8_1_17:80426676-80426727:+|nuORF'] 11134 6 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 0.02719 2 -0.6964551306182432 0.2136400115080026 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 127915 14440 VPGSVANQ True PC9_epitope_Rep4 770.3922672145 770.39116993586 63.452 2 -0.6964677480642081 0.2136400115080026 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 39214 12177 HIGDTLCPAE True PC9_epitope_Rep2 1054.4753452154598 1054.4742499358601 52.151 2 -0.6964988421041323 0.2136400115080026 1.0 ['KIAA1614|p.V603L|1|0.29|ENSG00000135835|chr1:180935716-180935716|G/T|missense_variant'] 131353 14410 VTGQRLTI True PC9_epitope_Rep2 886.52361573722 886.52250993586 60.695 2 -0.6965293050774156 0.2136400115080026 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 19425 10293 ELNCSGKYFA True H1975_Epitope_Rep3 1130.50664534374 1130.50554993586 44.644 2 -0.6965937091135955 0.2136400115080026 1.0 ['nc|ENSG00000156042|Q5T0N1-2|CFAP70', 'nc|ENSG00000156042|Q5T0N1|CFAP70', 'ENSG00000156042|ENST00000355577|CFAP70', 'ENST00000493787.5_1_10:75056784-75072389:-|nuORF'] 62995 18038 LLPPGQVSL True PC9_epitope_Rep6 922.5487678559 922.54766993586 82.014 2 -0.696608925912986 0.2136400115080026 1.0 ['ENSG00000180878|ENST00000316375|C11orf42'] 57524 9032 LEDPFECND True H1975_Epitope_Rep2 1080.40699087212 1080.4064749679299 39.693 1 -0.6966391026128139 0.2136400115080026 1.0 ['ZNF705A|p.S121L|1|0.23|ENSG00000196946|chr12:8177042-8177042|C/T|missense_variant', 'ENST00000525473.1_1_11:71518673-71529252:-|nuORF', 'nc|ENSG00000214534|A8MWA4|ZNF705EP', 'ENSG00000215372|ENST00000400156|ZNF705G', 'ENSG00000196946|ENST00000396570|ZNF705A'] 64718 12935 LPWARELESRE True PC9_epitope_Rep4 1384.70991293676 1384.70880993586 57.64 2 -0.696659130666941 0.2136400115080026 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 132940 25266 VVNIRNLIEK True PC9_epitope_Rep2 1196.72410644892 1196.7235749679298 102.85 1 -0.6966673766003383 0.2136400115080026 1.0 ['ENST00000395603.7_1_X:76939207-76939318:-|nuORF'] 133280 18183 VVTSVKTRVS True NCI_RA007_Epitope_Rep3 1074.6397081186199 1074.6386099358601 79.642 2 -0.6966934923360775 0.2136400115080026 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 101786 18045 SLPALFNIDLL True H1975_Epitope_Rep3 1214.69107498514 1214.68996993586 75.595 2 -0.6967053488955084 0.2136486834335206 1.0 ['SCN2A|p.G1664D|1|0.18|ENSG00000136531|chr2:165388797-165388797|G/A|missense_variant'] 27341 18827 FLSLCQRRP True H1975_Epitope_Rep2 1118.60188314126 1118.6007899358601 78.172 2 -0.696706290403165 0.2136486834335206 1.0 ['ENST00000405520.5_1_20:44441294-44441366:+|nuORF'] 121534 16139 VFATDDGF True PC9_epitope_Rep3 870.3759484440199 870.37484993586 67.227 2 -0.6967871906972912 0.21367573133062806 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 126593 24235 VLLWKRTWWCH True NCI_RA007_Epitope_Rep5 1526.7968945497 1526.79578993586 100.63 2 -0.6967925980013123 0.21368440178057718 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 100050 9764 SIRKEYSV True PC9_epitope_Rep2 980.52909504048 980.52798993586 42.896 2 -0.6968090408896804 0.21368440178057718 1.0 ['ENSG00000117594|ENST00000367027|HSD11B1'] 73182 11750 MRWRWWQRLLP True H1975_Epitope_Rep3 1626.8717908254598 1626.8706899358601 50.34 2 -0.6968241698151768 0.21368660105980317 1.0 ['ENSG00000176410|ENST00000395176|DNAJC30'] 80245 4534 PGASENILGW True NCI_RA007_Epitope_Rep2 1042.5083595958997 1042.5072699358602 22.264 2 -0.6968318288222757 0.21368660105980317 1.0 ['nc|ENSG00000144645|Q9BXB5-2|OSBPL10', 'ENSG00000144645|ENST00000396556|OSBPL10'] 3888 21787 AHAPHYIAH True PC9_epitope_Rep5 1015.49879797171 1015.49770993586 88.836 2 -0.6968352371792652 0.21368660105980317 1.0 ['ENSG00000062582|ENST00000317534|MRPS24', 'ENST00000414932.1_1_7:43908445-43909104:-|nuORF'] 127155 12425 VLTWPVWI True PC9_epitope_Rep4 1012.5745886809199 1012.57348993586 55.597 2 -0.6968460692973033 0.21368660105980317 1.0 ['ENST00000468511.5_1_6:2838142-2838205:-|nuORF'] 126541 10907 VLLNDNVV True NCI_RA007_Epitope_Rep5 884.49673228304 884.49562993586 48.593 2 -0.6968712230186469 0.2136985057001408 1.0 ['PKHD1|p.I3042V|1|0.25|ENSG00000170927|chr6:51748492-51748492|T/C|missense_variant'] 57215 7946 LDVTGTHLV True PC9_epitope_Rep4 953.5181960036099 953.51708993586 38.005 2 -0.6969048034106854 0.21370717454165594 1.0 ['ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 31394 7688 GDVKTVRY True H1975_Epitope_Rep1 936.5028802926399 936.50178993586 34.539 2 -0.6969552405125418 0.21370717454165594 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.M2050Ifs*24|1|0.12|ENSG00000163092|chr2:167248067-167248067|G/-|frameshift_variant', 'XIRP2|p.R1098Ffs*7|1|0.04|ENSG00000163092|chr2:167245207-167245222|TAAGAAAGGGGTGCTT/-|frameshift_variant', 'XIRP2|p.A1392Lfs*11|1|0.36|ENSG00000163092|chr2:167246090-167246090|G/-|frameshift_variant', 'XIRP2|p.G1535Vfs*41|1|0.22|ENSG00000163092|chr2:167246520-167246520|G/-|frameshift_variant', 'XIRP2|p.R1900Efs*5|1|0.1|ENSG00000163092|chr2:167247612-167247612|C/-|frameshift_variant', 'XIRP2|p.G695Vfs*18|1|0.12|ENSG00000163092|chr2:167244000-167244000|G/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 82199 7616 PNYIRYFWHMK True H1975_Epitope_Rep3 1553.7601746878101 1553.75906993586 34.275 2 -0.6970295536236084 0.2137342174584431 1.0 ['ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 91924 23488 RKLPRNLRTW True PC9_epitope_Rep3 1338.79967143102 1338.7980149037899 95.625 3 -0.69708707442686 0.2137753557372086 1.0 ['ENST00000256412.8_1_8:24250814-24253263:+|nuORF'] 101638 9338 SLLRNVPP True H1975_Epitope_Rep3 894.5287011176599 894.52760993586 40.918 2 -0.6971473430125388 0.2137753557372086 1.0 ['ENST00000440595.5_1_20:32580682-32582022:-|nuORF'] 99478 11080 SICVMLVVI True PC9_epitope_Rep6 975.5496964560299 975.54858993586 53.539 2 -0.6971605269602883 0.2137753557372086 1.0 ['ENSG00000228594|ENST00000422725|FNDC10'] 22967 15661 EVERKSKMI True PC9_epitope_Rep2 1118.61177911862 1118.6106899358601 65.516 2 -0.6971802383313498 0.2137753557372086 1.0 ['nc|ENSG00000187398|Q86TE4-3|LUZP2', 'nc|ENSG00000187398|Q86TE4-2|LUZP2', 'ENST00000405855.6_1_11:24518789-24853530:+|nuORF', 'ENST00000531187.5_1_11:24518651-24912476:+|nuORF', 'nc|ENSG00000187398|Q86TE4-4|LUZP2', 'ENSG00000187398|ENST00000336930|LUZP2'] 27774 19399 FPWWLCLG True PC9_epitope_Rep2 1020.4891448047998 1020.48804993586 79.996 2 -0.6972311626717423 0.2137753557372086 1.0 ['ENST00000294072.8_2_11:61117466-61117760:-|nuORF'] 101100 4548 SLGKKDKE True PC9_epitope_Rep6 903.5025459394699 903.50144993586 24.75 2 -0.6972483135084319 0.2137753557372086 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'ENST00000342835.8_1_14:65216026-65230503:-|nuORF'] 63529 17633 LLYRRSSYRQK True NCI_RA007_Epitope_Rep2 1468.8262801016801 1468.8251899358602 73.329 2 -0.6973399249776169 0.21382619620665122 1.0 ['ENSG00000135912|ENST00000392102|TTLL4', 'TTLL4|p.E531Vfs*29|1|0.07|ENSG00000135912|chr2:218740161-218740162|-/TCACAGTTAGATTCTC|frameshift_variant', 'TTLL4|p.T586Yfs*9|1|0.26|ENSG00000135912|chr2:218745196-218745197|-/C|frameshift_variant'] 109682 5232 TECNQCKAPK True H1975_Epitope_Rep3 1120.50051441748 1120.49940993586 25.21 2 -0.6973407774397664 0.21382619620665122 1.0 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF'] 49625 23060 KGFWIHWKLKE True PC9_epitope_Rep4 1470.81359015966 1470.8124899358602 96.923 2 -0.6973427345797927 0.21382619620665122 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENSG00000166262|ENST00000299338|FAM227B'] 3058 6969 AFTKENLRAPG True NCI_RA007_Epitope_Rep5 1202.64077074778 1202.6396699358602 33.489 2 -0.6974367093889989 0.21388350690239769 1.0 ['CON__ENSEMBL:ENSBTAP00000031900'] 100602 6789 SLCSREVP True PC9_epitope_Rep1 889.43275212749 889.43164993586 30.919 2 -0.6974488148974555 0.21389540603950655 1.0 ['SPHKAP|p.T1640Pfs*16|1|0.09|ENSG00000153820|chr2:227991042-227991042|G/-|frameshift_variant', 'nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 68598 12324 LTHLSCLEIWY True H1975_Epitope_Rep1 1376.6798586784398 1376.6787699358601 52.431 2 -0.6975432594284664 0.2139343393827478 1.0 ['OR6Q1|p.F139Lfs*17|1|0.45|ENSG00000279051|chr11:58031366-58031366|T/-|frameshift_variant', 'ENSG00000279051|ENST00000302622|OR6Q1'] 13459 6648 DNEIELKKI True NCI_RA007_Epitope_Rep2 1100.607739284 1100.60664993586 30.469 2 -0.6975839637500967 0.2139343393827478 1.0 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 132642 6577 VVFSEDEMKKF True NCI_RA007_Epitope_Rep5 1357.6587888806896 1357.6576899358602 31.96 2 -0.6976425566173591 0.21396573642472305 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 21072 7282 EQVRYCARF True NCI_RA007_Epitope_Rep2 1170.5604122520997 1170.55930993586 32.946 2 -0.6976732550238092 0.21396573642472305 1.0 ['ENSG00000099282|ENST00000373290|TSPAN15', 'ENST00000478112.1_1_10:71211350-71243770:+|nuORF'] 29156 16062 FTPSWFCLP True H1975_Epitope_Rep2 1096.50518879176 1096.50408993586 66.986 2 -0.6976772521514684 0.21396573642472305 1.0 ['ENSG00000156299|ENST00000541036|TIAM1', 'nc|ENSG00000156299|Q13009-2|TIAM1', 'TIAM1|p.E762K|1|0.32|ENSG00000156299|chr21:31210149-31210149|C/T|missense_variant'] 61758 18276 LLAGVKAYI True PC9_epitope_Rep2 946.5851533646198 946.58404993586 75.619 2 -0.6976916117985448 0.21396573642472305 1.0 ['NCKAP1L|p.L1008Sfs*26|1|0.29|ENSG00000123338|chr12:54536192-54536192|C/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 120888 15702 VENHSYPIL True PC9_epitope_Rep6 1070.53965972418 1070.53856993586 72.61 2 -0.6976983771620894 0.21396573642472305 1.0 ['ENST00000370872.7_1_1:75188836-75188938:-|nuORF'] 120889 15702 VENHSYPIL True PC9_epitope_Rep6 1070.53965972418 1070.53856993586 72.61 2 -0.6976983771620894 0.21396573642472305 1.0 ['ENST00000370872.7_1_1:75188836-75188938:-|nuORF'] 75192 17313 NIAVRKSR True PC9_epitope_Rep2 942.5722972651399 942.57120993586 71.853 2 -0.6977120566589219 0.21396573642472305 1.0 ['nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA', 'nc|ENSG00000245848|P49715-3|CEBPA', 'ENSG00000092067|ENST00000206513|CEBPE', 'ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB', 'nc|ENSG00000172216|P17676-3|CEBPB', 'ENSG00000221869|ENST00000408965|CEBPD'] 108144 9266 SYFGSILTT True NCI_RA007_Epitope_Rep1 987.49131254943 987.4907649679301 40.041 1 -0.6977132001693058 0.21396573642472305 1.0 ['ENST00000504669.5_1_5:52201585-52248278:+|nuORF', 'ENSG00000213949|ENST00000282588|ITGA1'] 15863 5757 EDFWWMLWEHN True H1975_Epitope_Rep1 1591.65543483575 1591.65432993586 27.215 2 -0.6977374530451964 0.21396573642472305 1.0 ['PTPRD|p.R1730W|1|0.12|ENSG00000153707|chr9:8340408-8340408|G/A|missense_variant'] 16210 7640 EEEKEQDEDEY True NCI_RA007_Epitope_Rep5 1441.5368783110098 1441.53578993586 36.091 2 -0.6977604890050305 0.21397763215642357 1.0 ['ENST00000473067.1_1_2:37315561-37321362:+|nuORF', 'nc|ENSG00000152133|Q8N954-2|GPATCH11', 'ENSG00000152133|ENST00000674370|GPATCH11', 'nc|ENSG00000152133|Q8N954|GPATCH11'] 47366 23450 IVHRRIINRF True H1975_Epitope_Rep3 1322.8047568114596 1322.8036499358602 97.871 2 -0.697817693746524 0.21398305084745764 1.0 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3'] 113930 17066 TNTVGEVIE True PC9_epitope_Rep1 960.4763907612798 960.47584496793 70.469 1 -0.6978229097424885 0.21398305084745764 1.0 ['ENSG00000153179|ENST00000542104|RASSF3'] 100664 7760 SLDLDGRFSP True H1975_Epitope_Rep3 1105.54038800017 1105.53928993586 34.833 2 -0.6978256016255215 0.21398305084745764 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 27755 9578 FPSPKPIP True H1975_Epitope_Rep3 881.5010893874899 881.49998993586 41.853 2 -0.697853144968703 0.21400360153140746 1.0 ['nc|ENSG00000226266|Q9UIF8-4|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-2|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-5|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-3|BAZ2B', 'ENSG00000123636|ENST00000392783|BAZ2B'] 110738 11807 TGGGGGGD True NCI_RA007_Epitope_Rep2 576.21396849936 576.2134249679301 50.526 1 -0.6978672877043046 0.21400360153140746 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 128693 12271 VPVTTDAMP True H1975_Epitope_Rep2 929.4528188657299 929.4522749679301 52.283 1 -0.6978810015819658 0.21400360153140746 1.0 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 5929 5525 APGSAKSLT True PC9_epitope_Rep4 830.44978209062 830.44868993586 28.017 2 -0.6979279808410099 0.2140090185515843 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7'] 137999 17779 YFRSYKLLLKK True NCI_RA007_Epitope_Rep3 1457.8758560630497 1457.87422490379 77.95 3 -0.6979366227485579 0.2140090185515843 1.0 ['ENSG00000197498|ENST00000441448|RPF2'] 126806 16961 VLPRNLAL True PC9_epitope_Rep3 894.5650866263799 894.56398993586 70.402 2 -0.6979607039441095 0.2140090185515843 1.0 ['ENSG00000188676|ENST00000502986|IDO2', 'IDO2|p.G381Afs*8|1|0.19|ENSG00000188676|chr8:40015517-40015517|G/-|frameshift_variant', 'nc|ENSG00000188676|Q6ZQW0-2|IDO2'] 129481 25540 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 107.92 2 -0.6980142347657388 0.21401767340515676 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 23319 5604 EVQRLTSA True NCI_RA007_Epitope_Rep5 902.4821448480599 902.48104993586 28.244 2 -0.6980283713814687 0.21401767340515676 1.0 ['ENSG00000165506|ENST00000298292|DNAAF2', 'nc|ENSG00000165506|Q9NVR5-2|DNAAF2'] 101225 18023 SLHIPDHLP True PC9_epitope_Rep5 1027.54507945779 1027.54398993586 74.342 2 -0.6980824109680619 0.2140198511166253 1.0 ['PCDHGC4|p.R388H|1|0.24|ENSG00000242419|chr5:141486336-141486336|G/A|missense_variant'] 83655 10090 PVEFTQEN True H1975_Epitope_Rep1 962.4345259493 962.43342993586 43.747 2 -0.6980907064353522 0.2140198511166253 1.0 ['ENSG00000138750|ENST00000264883|NUP54', 'nc|ENSG00000138750|Q7Z3B4-3|NUP54'] 141638 6112 YTSETYLMKHM True H1975_Epitope_Rep1 1402.6261088534202 1402.6250099358601 28.578 2 -0.6980974515752546 0.2140198511166253 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 77703 6849 NTKLDDLF True NCI_RA007_Epitope_Rep4 964.48656152216 964.48546993586 32.966 2 -0.6981075839737351 0.2140198511166253 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000419884.5_1_2:44115741-44117437:-|nuORF'] 112722 14939 TLGSTRRGID True PC9_epitope_Rep3 1074.57817049122 1074.5770699358602 62.595 2 -0.6982474846155925 0.21405446293494704 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 116140 11384 TSSVSSLMSSP True PC9_epitope_Rep2 1081.4961402296901 1081.4950499358602 49.11 2 -0.6982589564777901 0.21405446293494704 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant'] 91836 25580 RKKKKKHH True NCI_RA007_Epitope_Rep1 1088.7043144942 1088.70377496793 105.87 1 -0.6982886264613183 0.21405446293494704 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 101689 11614 SLMHGIRN True PC9_epitope_Rep6 926.47561999898 926.47452993586 55.797 2 -0.6983636299655595 0.21405446293494704 1.0 ['ENSG00000166716|ENST00000560079|ZNF592'] 107026 14763 SVFLDQMKKF True PC9_epitope_Rep4 1241.64783027417 1241.64619490379 64.72 3 -0.6983856757091607 0.21405446293494704 1.0 ['ENSG00000136261|ENST00000258761|BZW2'] 59519 11188 LFRVTERWR True PC9_epitope_Rep3 1261.7043740638499 1261.70272490379 48.04 3 -0.6984475230055965 0.21405446293494704 1.0 ['nc|ENSG00000099866|Q13477-4|MADCAM1', 'nc|ENSG00000099866|Q13477-2|MADCAM1', 'nc|ENSG00000099866|Q13477-3|MADCAM1', 'ENSG00000099866|ENST00000215637|MADCAM1'] 94360 20712 RRRLWRWWKLQ True PC9_epitope_Rep5 1682.9746161012197 1682.9735099358602 84.727 2 -0.698476075171512 0.21405446293494704 1.0 ['chr12:54283225-54283827|537|29.56|0.0|21.5|+|1|HNRNPA1,HNRNPA1|2'] 18765 8452 ELCSLHTYHDL True H1975_Epitope_Rep1 1329.60233663373 1329.6012299358601 37.439 2 -0.6984807235538617 0.21405446293494704 1.0 ['ENST00000519937.6_1_2:85886341-85886767:-|nuORF'] 97734 6589 SEIKQKSL True NCI_RA007_Epitope_Rep5 931.53384606775 931.53274993586 32.005 2 -0.6985880570205059 0.21412686646192947 1.0 ['WBP4|p.D122Ifs*8|1|0.16|ENSG00000120688|chr13:41068655-41068655|A/-|frameshift_variant', 'WBP4|p.I132*|1|0.07|ENSG00000120688|chr13:41068691-41068691|C/-|frameshift_variant', 'ENSG00000120688|ENST00000379487|WBP4'] 119338 17186 VAPALAAPT True PC9_epitope_Rep1 809.46470387877 809.4641549679301 70.926 1 -0.6987633208497853 0.21426194294012646 1.0 ['TP53|p.P77L|1|0.1|ENSG00000141510|chr17:7676139-7676139|G/A|missense_variant'] 68563 12112 LTGSLSGPFP True PC9_epitope_Rep1 974.5072969667399 974.50618993586 51.451 2 -0.6987696464585675 0.21426194294012646 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 132941 24525 VVNIRNLIEK True PC9_epitope_Rep4 1196.72410644892 1196.7235749679298 102.82 1 -0.698772265135558 0.21426194294012646 1.0 ['ENST00000395603.7_1_X:76939207-76939318:-|nuORF'] 56928 14440 LDQINLQL True NCI_RA007_Epitope_Rep4 955.5338460677499 955.53274993586 62.892 2 -0.6987854608897355 0.21426194294012646 1.0 ['ENST00000313349.3_1_2:64862240-64862327:-|nuORF'] 11125 9453 DDEDDDDI True H1975_Epitope_Rep3 950.29887989178 950.29778993586 41.365 2 -0.6987930215865905 0.21426194294012646 1.0 ['ENSG00000213047|ENST00000620048|DENND1B'] 56016 3912 LASLTQHQKT True PC9_epitope_Rep4 1125.6142216467701 1125.61258490379 21.238 3 -0.6989027682706633 0.2143159678102499 1.0 ['nc|ENSG00000228623|P0CG24|ZNF883'] 119109 13308 VAGTSEMAGAV True PC9_epitope_Rep5 991.4644461785898 991.46334993586 56.201 2 -0.6989328525036327 0.2143159678102499 1.0 ['ENST00000500161.2_1_19:58653993-58666470:-|nuORF'] 125038 16573 VIDEWTEKAL True PC9_epitope_Rep1 1202.6183039676998 1202.61720993586 68.571 2 -0.6989566543750597 0.2143397368022992 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 122638 5999 VGFWTDKEEL True PC9_epitope_Rep5 1222.5870038394198 1222.58536490379 28.071 3 -0.6990075665117945 0.2143397368022992 1.0 ['ENST00000492097.5_1_3:141882642-141900319:-|nuORF', 'nc|ENSG00000175066|Q6ZS86-3|GK5', 'ENSG00000175066|ENST00000392993|GK5'] 26119 7145 FGSSLVCG True NCI_RA007_Epitope_Rep1 768.3476255212 768.3470749679301 31.782 1 -0.6991088099331252 0.21439699898655293 1.0 ['ENST00000427497.3_1_17:17136120-17140292:-|nuORF'] 57092 14316 LDSPAALAE True PC9_epitope_Rep3 885.4443623570099 885.44326993586 60.153 2 -0.6991464871469513 0.21440888189738624 1.0 ['ENSG00000147571|ENST00000276571|CRH'] 34960 22568 GQRLPVEDFSL True PC9_epitope_Rep1 1259.6510010783097 1259.64990993586 91.614 2 -0.6992197386275896 0.21442076444874683 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 18646 13682 EKWKLHSRRRR True NCI_RA007_Epitope_Rep1 1550.9018450837798 1550.9007499358602 57.232 2 -0.6993054609510937 0.21446289741960856 1.0 ['nc|ENSG00000197467|Q5TAT6-10|COL13A1', 'nc|ENSG00000197467|Q5TAT6-8|COL13A1', 'ENSG00000197467|ENST00000645393|COL13A1', 'nc|ENSG00000197467|Q5TAT6-11|COL13A1', 'nc|ENSG00000197467|Q5TAT6-9|COL13A1', 'nc|ENSG00000197467|Q5TAT6-4|COL13A1', 'nc|ENSG00000197467|Q5TAT6-3|COL13A1', 'nc|ENSG00000197467|Q5TAT6-7|COL13A1', 'nc|ENSG00000197467|Q5TAT6-2|COL13A1', 'nc|ENSG00000197467|Q5TAT6-5|COL13A1', 'nc|ENSG00000197467|Q5TAT6-6|COL13A1', 'nc|ENSG00000197467|Q5TAT6|COL13A1'] 31904 4679 GELTSGKYPN True NCI_RA007_Epitope_Rep5 1064.5138388991597 1064.51274993586 24.682 2 -0.6993369127346112 0.2144747787945247 1.0 ['ENSG00000173431|ENST00000308227|RNASE8'] 105384 25398 SRRTLLPIPT True PC9_epitope_Rep5 1152.6978917010797 1152.69737496793 102.92 1 -0.6993835399108287 0.21448665981003084 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 113627 10372 TLVTNTEI True PC9_epitope_Rep1 889.4756624852901 889.47456993586 44.78 2 -0.6994055538284926 0.21449854046614336 1.0 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant'] 81835 12208 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 54.777 2 -0.6996692525328694 0.21458604313500107 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 129242 10075 VQVAEAARAP True PC9_epitope_Rep3 1010.5508931142198 1010.54978993586 43.707 2 -0.6997646674449229 0.2146519260144281 1.0 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 45930 8726 ISEIDEDAFRK True NCI_RA007_Epitope_Rep5 1321.6513950011297 1321.6502899358602 40.23 2 -0.699779078223085 0.2146519260144281 1.0 ['ENSG00000083782|ENST00000261172|EPYC'] 20885 20416 EQLIWKSEGLP True H1975_Epitope_Rep2 1298.68705223386 1298.6859499358602 84.594 2 -0.6997822427228753 0.2146519260144281 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 113065 9920 TLNPDSHLIE True NCI_RA007_Epitope_Rep5 1137.56660274801 1137.56550993586 44.799 2 -0.6998492883443488 0.21467568017180103 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 63807 15555 LNHEDLVL True PC9_epitope_Rep2 951.5025459394699 951.50144993586 65.105 2 -0.6998668441297569 0.21467568017180103 1.0 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000496379.5_1_15:91433070-91435551:+|nuORF', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 106517 11017 STLPKSLSL True PC9_epitope_Rep1 944.55424715916 944.55314993586 47.264 2 -0.6999135378892863 0.21470267981368338 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 122521 16883 VGERAKRRSP True PC9_epitope_Rep6 1154.6632375278598 1154.66214993586 77.457 2 -0.6999235481003843 0.2147296786389414 1.0 ['ENST00000262096.12_1_8:17014207-17053083:+|nuORF'] 4884 6830 ALESYIHHS True PC9_epitope_Rep3 1055.5036085686302 1055.5025099358602 31.287 2 -0.6999740991551338 0.2147383065918611 1.0 ['TAS2R20|p.F267Lfs*13|1|0.18|ENSG00000255837|chr12:10997075-10997075|A/-|frameshift_variant'] 80757 16520 PHHPMVLDL True PC9_epitope_Rep6 1057.5378859023701 1057.53678993586 75.981 2 -0.7000177017879635 0.2147383065918611 1.0 ['ENSG00000168447|ENST00000343070|SCNN1B', 'nc|ENSG00000168447|P51168-2|SCNN1B'] 125484 6900 VIYARLWWWPD True NCI_RA007_Epitope_Rep2 1503.7663056140698 1503.7646549037902 31.458 3 -0.7000244026162333 0.21475018146624728 1.0 ['SMAD4|p.R100W|1|0.29|ENSG00000141646|chr18:51048734-51048734|A/T|missense_variant'] 56352 6598 LDDKGWRR True PC9_epitope_Rep1 1044.54647644012 1044.5453699358602 30.182 2 -0.7001066752372894 0.2147771779400868 1.0 ['ENSG00000148384|ENST00000371712|INPP5E', 'nc|ENSG00000148384|Q9NRR6-2|INPP5E', 'INPP5E|p.P191Rfs*105|1|0.13|ENSG00000148384|chr9:136438849-136438850|-/ACATCGCCTCCGACTCCCT|frameshift_variant'] 12226 20255 DIILQNLVEL True H1975_Epitope_Rep1 1168.67033954056 1168.66924993586 84.258 2 -0.7001521150845978 0.21478580393461463 1.0 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68', 'ENST00000588736.1_1_17:74041371-74044231:-|nuORF', 'nc|ENSG00000167881|Q9UHB9-3|SRP68'] 25103 3324 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 18.566 2 -0.7001546328696895 0.21478580393461463 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 129050 6002 VQNLQQHNLI True H1975_Epitope_Rep3 1205.65166978465 1205.6505699358602 28.099 2 -0.7001985648734126 0.21478793377183034 1.0 ['KLHL4|p.G577Wfs*3|1|0.39|ENSG00000102271|chrX:87635577-87635578|-/T|frameshift_variant', 'KLHL4|p.H625Mfs*32|1|0.62|ENSG00000102271|chrX:87635717-87635717|G/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 59906 8595 LGGLKLDTP True H1975_Epitope_Rep3 912.5280324113199 912.52692993586 38.052 2 -0.700203696684437 0.21478793377183034 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2'] 106699 14139 STTRWQASL True NCI_RA007_Epitope_Rep3 1048.53015766964 1048.5290699358602 62.903 2 -0.7002408484202226 0.21478793377183034 1.0 ['ENST00000474669.1_1_3:122439146-122439230:+|nuORF'] 34077 13912 GLWKAERYELI True H1975_Epitope_Rep2 1376.7452358163198 1376.7436049037901 58.659 3 -0.7003100237307818 0.21478793377183034 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9'] 103780 7146 SPVVPAPR True PC9_epitope_Rep4 821.47593726881 821.47484993586 34.764 2 -0.7003826855837546 0.21482355075750703 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 119926 8743 VDLPFMYSI True PC9_epitope_Rep1 1083.53106918643 1083.5299699358602 38.468 2 -0.7003851917181695 0.21482355075750703 1.0 ['ENSG00000165125|ENST00000359396|TRPV6', 'TRPV6|p.R615Sfs*43|1|0.34|ENSG00000165125|chr7:142872424-142872425|-/A|frameshift_variant', 'nc|ENSG00000165125|Q9H1D0-2|TRPV6'] 67230 3774 LSRLRNKP True NCI_RA007_Epitope_Rep4 982.6035973934199 982.60250993586 20.686 2 -0.7004107408381679 0.21482355075750703 1.0 ['ENSG00000070366|ENST00000263073|SMG6', 'SMG6|p.G524Afs*41|1|0.32|ENSG00000070366|chr17:2299182-2299182|C/-|frameshift_variant'] 109573 7900 TDVQNNKF True PC9_epitope_Rep1 964.4614094034799 964.46030993586 35.212 2 -0.7004636184570077 0.21488078138465957 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'nc|ENSG00000150054|Q5T2T1-2|MPP7'] 46162 7742 ISLKPYHISK True NCI_RA007_Epitope_Rep5 1184.6917436914798 1184.69008490379 36.477 3 -0.7005190031279872 0.21491964137221994 1.0 ['ENSG00000128908|ENST00000648947|INO80'] 93253 22340 RPRRRKHPWRR True PC9_epitope_Rep6 1599.9559463453097 1599.95431490379 98.902 3 -0.7005397652110945 0.21491964137221994 1.0 ['ENST00000264607.8_1_2:239335652-239342206:+|nuORF'] 101336 8937 SLIRPVNTP True PC9_epitope_Rep1 995.57637958607 995.57528993586 39.217 2 -0.7006174149581861 0.21495524915336237 1.0 ['LTR8_dup2971|chr17:8380695-8381392:+|3.100241796106028|0.2447948664736123|3.66|541.0|5|1|sense'] 3065 14371 AFVIIHYL True PC9_epitope_Rep5 974.5589386167801 974.55784993586 60.278 2 -0.7006399087481928 0.21495524915336237 1.0 ['ENST00000274030.10_1_4:120214337-120214382:+|nuORF'] 23196 13729 EVLQESAAV True PC9_epitope_Rep6 944.4814761417198 944.48036993586 64.597 2 -0.7006432236347618 0.21495524915336237 1.0 ['ENSG00000114646|ENST00000264723|CSPG5', 'nc|ENSG00000114646|O95196|CSPG5'] 80398 6793 PGIEENDLAK True NCI_RA007_Epitope_Rep2 1084.540053647 1084.53894993586 31.039 2 -0.7007051490945649 0.21499735429737699 1.0 ['nc|ENSG00000166734|Q6P4E1-2|GOLM2', 'nc|ENSG00000166734|Q6P4E1-5|GOLM2', 'ENSG00000166734|ENST00000299957|GOLM2', 'ENST00000557945.5_1_15:44629999-44640853:+|nuORF', 'ENST00000559037.1_1_15:44624204-44638089:+|nuORF'] 31389 6429 GDVDVPKT True H1975_Epitope_Rep3 829.41814760917 829.4175949679301 29.705 1 -0.7007518078632082 0.21502108939180914 1.0 ['ENSG00000167914|ENST00000301659|GSDMA'] 84279 16050 PYPIQPQLP True H1975_Epitope_Rep1 1051.57023157647 1051.56967496793 67.073 1 -0.7007653082364745 0.21502108939180914 1.0 ['ENSG00000167987|ENST00000301765|VPS37C'] 108141 17098 SYFAYDLHL True NCI_RA007_Epitope_Rep4 1127.5287606873098 1127.52766993586 74.079 2 -0.7007967327537744 0.21504807401584325 1.0 ['ENST00000544844.5_1_11:64085215-64085383:-|nuORF'] 5965 5562 APHPGLSEA True PC9_epitope_Rep5 877.42938099921 877.42828993586 26.399 2 -0.7008405597323427 0.21505994043749715 1.0 ['nc|ENSG00000071564|P15923-3|TCF3', 'nc|ENSG00000071564|P15923-2|TCF3', 'ENSG00000071564|ENST00000262965|TCF3'] 100032 16133 SIQSAPPEPA True PC9_epitope_Rep6 995.4923751785899 995.49126993586 74.399 2 -0.7008766339434553 0.21506530414802275 1.0 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST', 'ENST00000513666.5_1_5:96073558-96090478:+|nuORF'] 113877 4689 TNPNHIYL True PC9_epitope_Rep4 970.4872302285 970.48612993586 24.577 2 -0.7008887791066556 0.21506530414802275 1.0 ['ENST00000309534.10_1_3:88105110-88107183:-|nuORF'] 107038 5852 SVFRDLVIK True NCI_RA007_Epitope_Rep3 1075.6389798426299 1075.6378899358601 29.996 2 -0.7009004531060393 0.21506530414802275 1.0 ['ENSG00000182481|ENST00000330459|KPNA2'] 63413 15212 LLVMLEVPS True PC9_epitope_Rep1 999.56745469515 999.56634993586 63.333 2 -0.7009913545807903 0.21507391843274784 1.0 ['ENST00000446230.6_1_11:94278904-94308218:+|nuORF'] 126723 24760 VLPGKKKKKT True H1975_Epitope_Rep3 1125.75976368165 1125.75811490379 102.98 3 -0.7010156650273632 0.21507391843274784 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 133287 23619 VVTSVKTRVS True PC9_epitope_Rep5 1074.6397081186199 1074.6386099358601 95.829 2 -0.701048884871313 0.21509211540496018 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 68548 5955 LTGPAICH True PC9_epitope_Rep3 810.40580910366 810.40470993586 27.964 2 -0.701070264230806 0.21509211540496018 1.0 ['ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 64059 15405 LPARVEEEAW True PC9_epitope_Rep5 1198.59823722946 1198.5965849037902 64.264 3 -0.7010790218439547 0.21509211540496018 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40'] 74481 5518 NEYVSCTCHQ True H1975_Epitope_Rep2 1182.44339346418 1182.4417349037901 26.238 3 -0.7011228445237714 0.21509211540496018 1.0 ['LRRTM1|p.G508V|1|0.39|ENSG00000162951|chr2:80302297-80302297|C/A|missense_variant'] 47094 9693 ITTHYTIYP True PC9_epitope_Rep4 1107.5600608155898 1107.5589699358602 44.918 2 -0.701123424252791 0.21509211540496018 1.0 ['ETFDH|p.P483Sfs*7|1|0.1|ENSG00000171503|chr4:158706349-158706350|-/T|frameshift_variant', 'ENSG00000171503|ENST00000511912|ETFDH', 'ENST00000436096.2_1_4:159593593-159602751:+|nuORF'] 110680 7092 TGATVQSVP True PC9_epitope_Rep2 858.44469671018 858.44358993586 32.676 2 -0.7011319476334408 0.21509211540496018 1.0 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 81771 21416 PLPLMVSTPVI True PC9_epitope_Rep5 1165.67806777329 1165.6769699358601 87.442 2 -0.7011564579417511 0.21509211540496018 1.0 ['ENST00000394919.5_1_10:73856875-73857049:-|nuORF'] 133710 8716 VYDFWRMVWQE True NCI_RA007_Epitope_Rep1 1557.70747040861 1557.70582490379 37.905 3 -0.7011576664057755 0.21509211540496018 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU'] 42442 7498 IEDVHSEP True H1975_Epitope_Rep2 924.41887588516 924.41776993586 33.79 2 -0.7011605222006386 0.21509211540496018 1.0 ['ENSG00000188869|ENST00000359440|TMC3'] 131357 8763 VTGRRPQLFT True H1975_Epitope_Rep1 1173.6618405455297 1173.6607499358602 38.637 2 -0.7011852293381459 0.21509211540496018 1.0 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18'] 33557 12205 GLENLTAL True PC9_epitope_Rep4 829.4545331178899 829.45342993586 54.766 2 -0.7011912323376863 0.21509211540496018 1.0 ['ENSG00000122176|ENST00000354955|FMOD'] 94933 8319 RTGWVYRNV True PC9_epitope_Rep2 1149.60432566941 1149.60268490379 37.364 3 -0.7011958530889711 0.21509211540496018 1.0 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'nc|ENSG00000111906|Q7Z4H3-3|HDDC2', 'ENST00000609574.1_1_6:125621682-125623108:-|nuORF'] 15014 18089 DYKGDATVFFI True PC9_epitope_Rep6 1274.6183039676998 1274.61720993586 82.216 2 -0.7012007608922807 0.21509211540496018 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 105481 1456 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 8.2981 3 -0.7012201623778945 0.21510072692650636 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 94724 8251 RSEQVLGSWP True H1975_Epitope_Rep3 1157.58292151849 1157.58182993586 36.723 2 -0.7012255967427936 0.21510072692650636 1.0 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF'] 64273 8465 LPHSIAPG True PC9_epitope_Rep4 790.43373810366 790.43264993586 40.03 2 -0.7012965798314408 0.21510608716677748 1.0 ['ENST00000302424.11_1_10:104417132-104417561:+|nuORF'] 92040 12301 RKRWHRWQDHH True NCI_RA007_Epitope_Rep5 1640.82974277268 1640.82864993586 53.968 2 -0.7013043760386696 0.21510608716677748 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 59662 9345 LGAHSPSTL True PC9_epitope_Rep3 881.46068112749 881.45958993586 40.885 2 -0.7013077214150945 0.21510608716677748 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF', 'ENST00000498392.1_1_3:49070551-49070749:-|nuORF'] 116466 24107 TTLRKKKKG True NCI_RA007_Epitope_Rep2 1058.69241239782 1058.69130993586 101.27 2 -0.7013330035562281 0.21511680618936807 1.0 ['nc|ENSG00000157119|Q2TBA0-2|KLHL40', 'ENSG00000157119|ENST00000287777|KLHL40'] 89171 22778 QVRSSQRWWMW True PC9_epitope_Rep5 1548.7408362255599 1548.7397299358602 92.608 2 -0.7013514557471934 0.21511680618936807 1.0 ['ENST00000409822.1_1_2:238486756-238499247:-|nuORF'] 103244 14051 SPLGLAGL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 59.199 1 -0.7013973898497021 0.21511680618936807 1.0 ['nc|ENSG00000197558|A2VEC9-2|SSPOP', 'nc|ENSG00000197558|A2VEC9|SSPOP'] 12684 7728 DLDSLPEKLA True H1975_Epitope_Rep1 1099.57610480255 1099.5750099358602 34.687 2 -0.7014144791309993 0.21511680618936807 1.0 ['ENSG00000175224|ENST00000683050|ATG13', 'nc|ENSG00000175224|O75143-4|ATG13', 'nc|ENSG00000175224|O75143-2|ATG13', 'nc|ENSG00000175224|O75143|ATG13'] 67377 10420 LSSKTFWY True H1975_Epitope_Rep3 1030.51238234718 1030.51128993586 45.139 2 -0.7014309267544908 0.21511680618936807 1.0 ['ENST00000510383.1_1_4:41940685-41945948:+|nuORF'] 68485 10801 LTFPMWNP True PC9_epitope_Rep1 1004.47897404392 1004.47786993586 46.433 2 -0.7014652315990224 0.21511680618936807 1.0 ['ENST00000403290.5_1_11:13331558-13347974:+|nuORF'] 101223 5494 SLHHRPLGP True H1975_Epitope_Rep3 1012.5566472009998 1012.55554993586 26.187 2 -0.7014946555916205 0.21512427287149657 1.0 ['ENST00000594089.1_1_11:64546495-64546588:+|nuORF'] 47855 15158 IYHREEKRWRW True NCI_RA007_Epitope_Rep1 1657.8589772122898 1657.8578899358602 63.032 2 -0.7015050984250144 0.21512427287149657 1.0 ['CLEC5A|p.F148Lfs*19|1|0.17|ENSG00000258227|chr7:141931728-141931728|G/-|frameshift_variant', 'nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 110417 5086 TEWLRFYNKWL True H1975_Epitope_Rep3 1554.7983340183396 1554.79669490379 24.679 3 -0.701511901100883 0.21512427287149657 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000464865.5_1_7:140051761-140082350:-|nuORF', 'ENST00000473707.5_1_7:140051761-140069464:-|nuORF'] 20621 15081 EPTWADDLPAT True PC9_epitope_Rep6 1214.54553295026 1214.54389490379 70.064 3 -0.7015248924429333 0.21512427287149657 1.0 ['ENSG00000215018|ENST00000399429|COL28A1'] 87118 8660 QNVASEKQRR True NCI_RA007_Epitope_Rep1 1214.6479813865399 1214.6468899358601 37.688 2 -0.7015843117545235 0.21512427287149657 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 79010 6017 PALAGPPAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 28.198 2 -0.7016040797674851 0.21512427287149657 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 78765 8703 PAAITCQLDKA True NCI_RA007_Epitope_Rep1 1129.58014463717 1129.5790499358602 37.855 2 -0.7016099273646078 0.21512427287149657 1.0 ['NPAS3|p.S86C|1|0.35|ENSG00000151322|chr14:33215297-33215297|A/T|missense_variant'] 33153 16732 GIVALSCWL True PC9_epitope_Rep5 960.5102741722 960.50916993586 69.367 2 -0.7016242254159796 0.21513613150817393 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 115494 12061 TRPPPTVRSI True PC9_epitope_Rep1 1122.65094150866 1122.6493049037902 51.251 3 -0.7016664483233811 0.21514798978651398 1.0 ['nc|ENSG00000283787|A8MZF0|PRR33', 'ENSG00000283787|ENST00000640310|PRR33'] 16415 5199 EEKILRMLFT True H1975_Epitope_Rep3 1278.7005941230198 1278.69895490379 25.088 3 -0.7016799182272022 0.21515659701763132 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 140505 15733 YRLRGKLR True NCI_RA007_Epitope_Rep2 1060.6617809758798 1060.66068993586 65.915 2 -0.7016814291843338 0.21515659701763132 1.0 ['nc|ENSG00000204655|Q16653-12|MOG', 'nc|ENSG00000204655|Q16653-4|MOG', 'nc|ENSG00000204655|Q16653-9|MOG', 'nc|ENSG00000204655|Q16653-8|MOG', 'nc|ENSG00000204655|Q16653-11|MOG', 'nc|ENSG00000204655|Q16653-2|MOG', 'nc|ENSG00000204655|Q16653-6|MOG', 'nc|ENSG00000204655|Q16653-3|MOG', 'nc|ENSG00000204655|Q16653-7|MOG', 'ENSG00000204655|ENST00000376917|MOG', 'nc|ENSG00000204655|Q16653-5|MOG', 'nc|ENSG00000204655|Q16653-13|MOG'] 135759 22759 WMALLLDQET True H1975_Epitope_Rep2 1218.59546034814 1218.59380490379 93.981 3 -0.7018031465079353 0.21518031152271458 1.0 ['ENSG00000170927|ENST00000371117|PKHD1', 'nc|ENSG00000170927|P08F94-2|PKHD1'] 79705 13974 PDTFVSLSY True NCI_RA007_Epitope_Rep4 1027.48622716899 1027.48567496793 61.024 1 -0.7018119225331256 0.21518031152271458 1.0 ['ENSG00000152580|ENST00000282466|IGSF10', 'IGSF10|p.S862Tfs*18|1|0.03|ENSG00000152580|chr3:151447398-151447399|-/CCCCAATAACAGTA|frameshift_variant'] 110405 10385 TEVSYTFSDYP True H1975_Epitope_Rep2 1307.55576328079 1307.5546699358601 44.957 2 -0.7018266080742902 0.21518891725711178 1.0 ['ENSG00000116663|ENST00000376753|FBXO6'] 16414 8703 EEKIATFSLSE True H1975_Epitope_Rep1 1252.61869789052 1252.6176099358602 38.402 2 -0.7018534673511646 0.21518891725711178 1.0 ['ENSG00000204290|ENST00000454136|BTNL2', 'nc|ENSG00000204290|Q9UIR0-2|BTNL2'] 10568 12419 CMKRHGIP True NCI_RA007_Epitope_Rep5 940.4735118239998 940.47240993586 54.426 2 -0.7019112484710545 0.21522773623385452 1.0 ['ENST00000480874.5_1_2:264964-275202:+|nuORF', 'nc|ENSG00000143727|P24666-4|ACP1', 'ENSG00000143727|ENST00000272065|ACP1', 'ENST00000484464.5_1_2:265208-277301:+|nuORF'] 28336 5943 FRSATTSGAPG True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 27.674 2 -0.7019482297629529 0.21522773623385452 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 41275 7648 HVNWFRRDEA True H1975_Epitope_Rep3 1328.63741670284 1328.63630993586 34.4 2 -0.7019871193754589 0.21523308861294904 1.0 ['ENSG00000100889|ENST00000216780|PCK2', 'nc|ENSG00000100889|Q16822-3|PCK2'] 117659 14630 TVTREKEE True PC9_epitope_Rep3 990.4981888350198 990.49708993586 61.407 2 -0.7020088137770392 0.21523308861294904 1.0 ['ENSG00000179071|ENST00000316398|CCDC89'] 22550 3560 ETIKYDGTDRR True NCI_RA007_Epitope_Rep2 1352.6684420475997 1352.6668049037899 18.496 3 -0.7020155372370814 0.21523308861294904 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 113028 8571 TLNDTKMP True H1975_Epitope_Rep2 918.44806783846 918.44696993586 37.921 2 -0.7020305558560269 0.215238440506941 1.0 ['ENSG00000112706|ENST00000369950|IMPG1'] 10537 10524 CLNFNSTLI True PC9_epitope_Rep5 1023.50591706775 1023.50480993586 45.468 2 -0.7020535857269848 0.215238440506941 1.0 ['nc|ENSG00000007952|Q9Y5S8-3|NOX1', 'ENSG00000007952|ENST00000372966|NOX1'] 115950 23286 TSHGLRRHPS True PC9_epitope_Rep3 1146.6006372713 1146.59899490379 94.849 3 -0.7021004209920801 0.215238440506941 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 55606 7377 LAIEYREEH True NCI_RA007_Epitope_Rep2 1158.56693710118 1158.5658499358601 33.319 2 -0.7021336579820694 0.21526539983686294 1.0 ['ENSG00000187066|ENST00000530719|TMEM262'] 61047 14674 LIFTHWTMSRK True H1975_Epitope_Rep1 1418.7492756509398 1418.74816993586 61.659 2 -0.7021491973465259 0.21527074994335776 1.0 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 112665 11283 TLFRGLRV True PC9_epitope_Rep2 960.5868847001199 960.58578993586 48.725 2 -0.7021706777823669 0.21527074994335776 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 65278 7949 LQVNKVMSILF True H1975_Epitope_Rep1 1290.73697963174 1290.73588993586 35.523 2 -0.7022615151484667 0.21527074994335776 1.0 ['NTF3|p.L112Wfs*48|1|0.17|ENSG00000185652|chr12:5494543-5494543|C/-|frameshift_variant', 'ENSG00000185652|ENST00000423158|NTF3'] 110382 9301 TEVIVKSIL True H1975_Epitope_Rep1 1000.6168474157199 1000.61574993586 40.684 2 -0.7023280341536915 0.21530955941214674 1.0 ['nc|ENSG00000197415|Q14D04-4|VEPH1', 'nc|ENSG00000197415|Q14D04-3|VEPH1', 'nc|ENSG00000197415|Q14D04-2|VEPH1', 'ENSG00000197415|ENST00000362010|VEPH1'] 66890 11331 LSNLERLEKYR True NCI_RA007_Epitope_Rep1 1419.78341223019 1419.7823099358602 48.046 2 -0.7023363816579996 0.21530955941214674 1.0 ['ENSG00000204316|ENST00000309352|MRPL38', 'ENST00000410030.1_1_17:73900359-73901082:-|nuORF', 'ENST00000464758.1_1_17:73900462-73900977:-|nuORF', 'ENST00000493383.5_1_17:73897833-73900929:-|nuORF', 'ENST00000477736.5_1_17:73897061-73900795:-|nuORF', 'ENST00000493104.5_1_17:73897660-73900929:-|nuORF'] 68045 11118 LTDLHGLRRIF True PC9_epitope_Rep3 1339.77245362367 1339.7707949037901 47.763 3 -0.7023571924161802 0.2153181591626516 1.0 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000587504.5_1_17:73835995-73839803:-|nuORF', 'nc|ENSG00000092929|Q70J99-2|UNC13D', 'ENST00000591563.5_1_17:73836050-73840487:-|nuORF'] 58273 10023 LELRLQGHEK True H1975_Epitope_Rep1 1221.68296991293 1221.68186993586 43.491 2 -0.7023607709173175 0.2153181591626516 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 82649 8547 PQNGWNDP True H1975_Epitope_Rep3 926.38824446322 926.3876949679301 37.864 1 -0.7024765389058163 0.2154173777771065 1.0 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A'] 141779 12857 YVAYLKLN True NCI_RA007_Epitope_Rep2 982.5487678558999 982.54766993586 54.629 2 -0.7024947315926003 0.2154173777771065 1.0 ['ENSG00000130948|ENST00000375263|HSD17B3', 'nc|ENSG00000130948|P37058-2|HSD17B3', 'ENST00000464104.5_1_9:98997744-99012284:-|nuORF'] 101985 8013 SLQKAEKV True PC9_epitope_Rep4 901.5232813840498 901.52218993586 38.273 2 -0.7025049103893445 0.21544433033287017 1.0 ['ENSG00000204815|ENST00000377540|ODAD4'] 39318 21780 HITDIPIIM True PC9_epitope_Rep5 1051.5736027047499 1051.5725099358601 88.808 2 -0.7025809874475788 0.21548313045579484 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 107030 12278 SVFQNVLVSA True H1975_Epitope_Rep2 1062.57095985246 1062.5698699358602 52.311 2 -0.7026529374078226 0.21548313045579484 1.0 ['ZNF217|p.G588V|1|0.22|ENSG00000171940|chr20:53577001-53577001|C/A|missense_variant'] 13765 14451 DQFDERRY True H1975_Epitope_Rep1 1127.49958581735 1127.49848993586 60.783 2 -0.7027193307090084 0.21549172405460915 1.0 ['nc|ENSG00000158089|Q96FL9-2|GALNT14', 'nc|ENSG00000158089|Q96FL9-4|GALNT14', 'ENSG00000158089|ENST00000349752|GALNT14', 'ENST00000464038.5_1_2:31155024-31369832:-|nuORF', 'ENST00000455477.5_1_2:31155024-31348064:-|nuORF', 'GALNT14|p.D207Tfs*21|1|0.3|ENSG00000158089|chr2:30955653-30955653|C/-|frameshift_variant'] 14251 4502 DSNARVAPFRI True NCI_RA007_Epitope_Rep1 1244.6625688215197 1244.66092490379 21.616 3 -0.7027380999507434 0.21549172405460915 1.0 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8'] 125728 23516 VKRRRCGTR True PC9_epitope_Rep6 1130.6567126787797 1130.6556099358602 103.59 2 -0.7027616727899464 0.2155186734524367 1.0 ['ENST00000229633.6_1_6:126277992-126278139:+|nuORF'] 103515 8705 SPRGREDRRR True H1975_Epitope_Rep3 1283.69191188719 1283.6908099358602 38.483 2 -0.7028851896453859 0.21565340823291354 1.0 ['ENST00000540707.5_2_19:19144688-19153597:+|nuORF'] 26814 13634 FLAGVTQEL True PC9_epitope_Rep3 976.5229470308799 976.52184993586 57.509 2 -0.7029054916951762 0.21565340823291354 1.0 ['ENST00000535376.5_1_12:1023254-1025717:-|nuORF', 'ENST00000488642.6_1_12:1023254-1036092:-|nuORF', 'ENST00000228345.9_1_12:1022559-1036092:-|nuORF', 'RAD52|p.N361Gfs*34|1|0.05|ENSG00000002016|chr12:914008-914009|-/CAAGGCC|frameshift_variant', 'ENSG00000002016|ENST00000358495|RAD52'] 66036 10416 LSEFESQI True H1975_Epitope_Rep2 951.4549270407099 951.45382993586 45.079 2 -0.7029071933908103 0.21565340823291354 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 113505 19995 TLTELRRTV True PC9_epitope_Rep5 1087.6349570913499 1087.63386993586 81.965 2 -0.7029459559778267 0.21565340823291354 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000397031.2_1_2:182825941-182826409:-|nuORF'] 91035 16043 RFKKIQKLW True NCI_RA007_Epitope_Rep3 1245.7709970716899 1245.7693649037901 70.792 3 -0.7029531911257384 0.21565340823291354 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2'] 141906 19372 YVEFTRIL True PC9_epitope_Rep5 1039.5702315764697 1039.56912993586 79.561 2 -0.7029732742287 0.2156652522537487 1.0 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 109501 6451 TDMHRTWRETF True H1975_Epitope_Rep1 1478.6724818822202 1478.6708249037902 29.875 3 -0.7030405426065952 0.21567058255065985 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7', 'nc|ENSG00000146205|Q6IWH7-2|ANO7'] 85135 14573 QELQQLIL True PC9_epitope_Rep5 983.5651461960299 983.56404993586 61.055 2 -0.7030507428363111 0.21567058255065985 1.0 ['JDP2|p.R125L|1|0.22|ENSG00000140044|chr14:75469357-75469357|G/T|missense_variant'] 138783 2744 YITREDQYSK True H1975_Epitope_Rep1 1301.62518025329 1301.62354490379 14.102 3 -0.7030619885286845 0.21567058255065985 1.0 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 5176 17168 ALLWMWWRRN True NCI_RA007_Epitope_Rep2 1430.7393796735798 1430.7382899358602 71.519 2 -0.7030936776262586 0.21567916893156974 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 91873 23391 RKKQHRHFLVP True PC9_epitope_Rep1 1444.85276963304 1444.8516699358602 94.756 2 -0.7031164693224056 0.21567916893156974 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 135509 368 WKERILKAK True PC9_epitope_Rep1 1170.7237125260997 1170.7220549037902 2.0476 3 -0.7031306734223429 0.2156910114904347 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 74686 19623 NGRKSWRRW True NCI_RA007_Epitope_Rep1 1244.6639062341999 1244.6628099358602 80.519 2 -0.703181382003036 0.21570285369168052 1.0 ['ENST00000393533.6_2_9:131231627-131233701:+|nuORF'] 72424 8488 MKMHLQRALVV True PC9_epitope_Rep6 1324.7471674759602 1324.74553490379 42.364 3 -0.7032334584483294 0.21571469553532333 1.0 ['nc|ENSG00000119699|P10600-2|TGFB3', 'ENSG00000119699|ENST00000238682|TGFB3'] 32952 6826 GIDFNWEYP True NCI_RA007_Epitope_Rep3 1139.4923751785898 1139.4912699358601 33.958 2 -0.7032635073718113 0.21577064178631278 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'KDR|p.P1105Mfs*9|1|0.13|ENSG00000128052|chr4:55089466-55089467|-/CCTTCTTCATT|frameshift_variant', 'KDR|p.P1233Lfs*2|1|0.16|ENSG00000128052|chr4:55082602-55082602|C/-|frameshift_variant', 'nc|ENSG00000128052|P35968-2|KDR', 'nc|ENSG00000128052|P35968-3|KDR'] 142025 15289 YVLFYFLNC True NCI_RA007_Epitope_Rep5 1180.56270366788 1180.5616099358601 65.505 2 -0.7032844903518635 0.21577064178631278 1.0 ['ENST00000560776.1_1_15:59961053-59961500:-|nuORF'] 125726 26172 VKRRRCGTR True PC9_epitope_Rep1 1130.6567126787797 1130.6556099358602 106.0 2 -0.7033113111475069 0.21577064178631278 1.0 ['ENST00000229633.6_1_6:126277992-126278139:+|nuORF'] 85379 11031 QEVEEDQDPSC True H1975_Epitope_Rep2 1277.4717759566497 1277.47066993586 47.46 2 -0.7033295293038905 0.21577064178631278 1.0 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 126200 8102 VLGARPHLQPD True H1975_Epitope_Rep3 1201.6567551650899 1201.65564993586 36.139 2 -0.7033450298230084 0.21577064178631278 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 4793 21093 ALDYLKDFF True PC9_epitope_Rep3 1130.5648118428599 1130.56370993586 86.417 2 -0.7033521283003744 0.21577064178631278 1.0 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 87069 18946 QNINIFSQ True PC9_epitope_Rep2 962.48214484806 962.48159496793 78.241 1 -0.703364962918191 0.21578248135511338 1.0 ['nc|ENSG00000187984|Q9H560|ANKRD19P', 'ENST00000473204.5_1_9:95571946-95584543:+|nuORF'] 33067 17249 GILSVDLL True PC9_epitope_Rep5 828.49566965388 828.49456993586 71.362 2 -0.7034164024511691 0.2158094174127025 1.0 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'DIO2|p.R209Efs*?|1|0.41|ENSG00000211448|chr14:80202886-80202886|G/-|frameshift_variant', 'ENST00000438257.8_2_14:80669457-80677836:-|nuORF'] 55512 6989 LAGLYAAP True PC9_epitope_Rep2 774.42759009406 774.42648993586 32.282 2 -0.7035119929996924 0.21583635265700482 1.0 ['nc|ENSG00000166947|P16452-2|EPB42'] 7841 11853 ASVTPPGSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 50.92 2 -0.7035333511218684 0.2158481906976042 1.0 ['nc|ENSG00000127191|Q12933-4|TRAF2', 'nc|ENSG00000127191|Q12933-3|TRAF2', 'ENSG00000127191|ENST00000247668|TRAF2', 'nc|ENSG00000127191|Q12933-2|TRAF2'] 33093 14475 GIPIFMVL True PC9_epitope_Rep3 888.51429692348 888.5131899358599 60.787 2 -0.7035740265600285 0.21589022070589656 1.0 ['ENSG00000213463|ENST00000256366|SYNJ2BP'] 87388 6404 QPVKEQLAQA True PC9_epitope_Rep1 1110.6033226098998 1110.6022299358601 29.441 2 -0.7035973872168665 0.21589553928598385 1.0 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF'] 84708 6882 QDMKWKNKF True NCI_RA007_Epitope_Rep1 1223.6121134717898 1223.61100993586 30.773 2 -0.7036136337762252 0.21589553928598385 1.0 ['ENSG00000006025|ENST00000007414|OSBPL7', 'ENST00000579728.5_1_17:45885659-45892067:-|nuORF', 'ENST00000583167.5_1_17:45885659-45892067:-|nuORF'] 107884 9920 SVVPASSYIP True H1975_Epitope_Rep2 1018.5335117145801 1018.53240993586 43.146 2 -0.7036180423909458 0.21589553928598385 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 61578 23670 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 98.73 3 -0.7036407797973534 0.2159461417703176 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 100854 7260 SLEQMEHP True NCI_RA007_Epitope_Rep3 969.4225813666098 969.42148993586 35.668 2 -0.7036475019675834 0.2159461417703176 1.0 ['ENSG00000178404|ENST00000322630|CEP295NL'] 131924 20012 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.6399499358602 83.893 2 -0.7036485551536833 0.2159461417703176 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 100579 18672 SLCIMHLLL True PC9_epitope_Rep1 1041.57149452977 1041.57038993586 76.612 2 -0.7037449264859725 0.2159881658591073 1.0 ['ENST00000250405.9_2_14:23778607-23778970:+|nuORF'] 12249 6533 DIKHQLMKEVR True NCI_RA007_Epitope_Rep2 1395.76565399107 1395.76399490379 30.023 3 -0.7038980513570829 0.2160754716981132 1.0 ['ENSG00000165359|ENST00000639893|INTS6L', 'nc|ENSG00000165359|Q5JSJ4|INTS6L', 'ENST00000481429.1_1_X:134713888-134715555:+|nuORF', 'ENST00000494957.5_1_X:134713813-134716222:+|nuORF', 'nc|ENSG00000165359|Q5JSJ4-4|INTS6L'] 103360 5383 SPPGPAQAP True PC9_epitope_Rep4 820.40791727864 820.40682993586 27.434 2 -0.7039604894459571 0.21608078124764163 1.0 ['ENSG00000082497|ENST00000367012|SERTAD4', 'ENST00000483884.1_1_1:210411323-210419944:+|nuORF', 'ENST00000482421.1_1_1:210411290-210419944:+|nuORF'] 141049 8005 YSLRNKEVRET True NCI_RA007_Epitope_Rep2 1393.7313766573297 1393.7297249037902 35.767 3 -0.7039617171235373 0.21608078124764163 1.0 ['OR6F1|p.T291S|1|0.21|ENSG00000169214|chr1:247711885-247711885|T/A|missense_variant'] 28046 17831 FQRRALWVLAF True PC9_epitope_Rep6 1405.7982744486897 1405.7971699358602 81.217 2 -0.7039883512505777 0.21608078124764163 1.0 ['ENSG00000108684|ENST00000225823|ASIC2'] 79295 18935 PAPVILAAP True PC9_epitope_Rep3 847.51673945163 847.51564993586 78.058 2 -0.7040669065839279 0.21610770670450086 1.0 ['ENST00000377680.3_1_9:38621281-38621927:+|nuORF', 'ENST00000484285.2_1_9:38620779-38621927:+|nuORF'] 101516 6811 SLLELQVP True NCI_RA007_Epitope_Rep2 897.5171333744498 897.51602993586 31.11 2 -0.7041373821788782 0.21612484530169943 1.0 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF'] 88623 5196 QTEDQYIFCYQ True H1975_Epitope_Rep3 1436.5918315196798 1436.59018490379 25.076 3 -0.7041444276020512 0.21612484530169943 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 87415 3954 QPYKREGKWHK True NCI_RA007_Epitope_Rep2 1455.77351625283 1455.7718849037901 20.017 3 -0.7041464853786783 0.21612484530169943 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-3|CCPG1', 'ENST00000310958.10_2_15:55648420-55648633:-|nuORF'] 135435 5773 WHREKRRQRNK True H1975_Epitope_Rep1 1592.8872576487995 1592.88562490379 27.276 3 -0.7041537057497059 0.21612484530169943 1.0 ['SEMA3D|p.G747Afs*10|1|0.46|ENSG00000153993|chr7:84999534-84999534|C/-|frameshift_variant', 'ENSG00000153993|ENST00000284136|SEMA3D'] 105545 21194 SSCMILCSPC True NCI_RA007_Epitope_Rep5 1042.39558096674 1042.39448993586 88.557 2 -0.7042008041978315 0.2161366757723479 1.0 ['ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 83555 16609 PTWRRERWSPA True PC9_epitope_Rep5 1440.7374650972797 1440.73636993586 68.893 2 -0.7042542851951351 0.21616359794747964 1.0 ['ENST00000314607.10_1_1:35734570-35791000:+|nuORF'] 38312 4005 HEGKMKGCPV True NCI_RA007_Epitope_Rep2 1084.5157705587999 1084.5146699358602 20.216 2 -0.7043055926056675 0.21616890270588413 1.0 ['ENSG00000004961|ENST00000380762|HCCS'] 140564 10078 YRPQYGYWVIG True PC9_epitope_Rep1 1400.6877209401998 1400.68662993586 43.635 2 -0.7043079009455074 0.21616890270588413 1.0 ['nc|ENSG00000132274|Q8IYM9-2|TRIM22', 'ENSG00000132274|ENST00000379965|TRIM22'] 57593 11304 LEDVTPIP True H1975_Epitope_Rep1 882.46984882886 882.46930496793 48.459 1 -0.7043189616447876 0.21616890270588413 1.0 ['ENST00000518139.5_1_5:149823851-149824075:-|nuORF'] 73627 9350 MWNWMVSL True PC9_epitope_Rep3 1065.47759414493 1065.4764899358602 40.903 2 -0.7043485218813001 0.21618073161897863 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 83006 7973 PSGSNVDTL True PC9_epitope_Rep5 888.41887588516 888.41776993586 35.607 2 -0.7044243712826009 0.2161892976790511 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 74083 4969 NDPKNKHLEG True NCI_RA007_Epitope_Rep2 1150.5730851107799 1150.57198993586 23.949 2 -0.7044255388819236 0.2161892976790511 1.0 ['ENSG00000182898|ENST00000368806|TCHHL1'] 61579 23756 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 99.071 3 -0.7044410701779957 0.21619786322206797 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 57553 4821 LEDRPRDKPQR True NCI_RA007_Epitope_Rep1 1408.75350908424 1408.7518649037902 22.833 3 -0.7044470170796207 0.21619786322206797 1.0 ['ENSG00000130720|ENST00000372338|FIBCD1'] 841 4470 ADALKHKS True NCI_RA007_Epitope_Rep4 868.4766655448001 868.47556993586 23.57 2 -0.704530002141901 0.21620642824807607 1.0 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5', 'ENST00000476518.1_1_6:106649790-106727677:-|nuORF'] 20388 17247 EPAIQGVLD True PC9_epitope_Rep3 940.4865615221598 940.48546993586 71.491 2 -0.7045477988069089 0.21620642824807607 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 20939 6027 EQNWRQHREAY True H1975_Epitope_Rep3 1515.69672248411 1515.69508490379 28.197 3 -0.7045716925455929 0.21623334490199334 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 4653 11501 ALAESAGPL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 49.117 2 -0.704695499265774 0.21629043940125542 1.0 ['ENSG00000143570|ENST00000356205|SLC39A1', 'nc|ENSG00000143570|Q9NY26-2|SLC39A1', 'SLC39A1|p.G257D|1|0.26|ENSG00000143570|chr1:153960303-153960303|C/T|missense_variant'] 81934 10293 PLSRTNSI True PC9_epitope_Rep2 886.4872302285 886.48612993586 44.921 2 -0.7047680802246561 0.21631408999004134 1.0 ['ENSG00000235711|ENST00000421388|ANKRD34C'] 100474 6285 SLAPKHPG True NCI_RA007_Epitope_Rep2 805.44463714053 805.44354993586 29.054 2 -0.7047685610998479 0.21631408999004134 1.0 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 109342 8170 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep1 1286.5311461188496 1286.53004993586 36.367 2 -0.7048307458810367 0.2163646513873591 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 58998 22244 LEVIWIVF True PC9_epitope_Rep4 1017.5899043918898 1017.58880993586 93.799 2 -0.704843077847472 0.2163646513873591 1.0 ['ENST00000313117.10_2_2:38970876-38971032:-|nuORF'] 83157 4909 PSSAQAAVI True PC9_epitope_Rep4 842.4497820906199 842.44868993586 25.476 2 -0.7048637586960729 0.2163646513873591 1.0 ['ENST00000533443.5_3_11:44960744-44968624:-|nuORF'] 107083 12177 SVHKFFNLLKE True PC9_epitope_Rep1 1360.7503211967598 1360.74868490379 51.697 3 -0.7049001771685018 0.2163870617343552 1.0 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF'] 81813 12284 PLPPVPASP True PC9_epitope_Rep2 873.4960040070499 873.49490993586 52.56 2 -0.7049108148457988 0.2163870617343552 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 81840 10962 PLPVPPPTG True PC9_epitope_Rep6 873.49600400705 873.49490993586 53.053 2 -0.7049284752756154 0.2163870617343552 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 63643 9865 LMPTELAAL True PC9_epitope_Rep2 957.5205045027299 957.51940993586 43.28 2 -0.7049541803976889 0.2163870617343552 1.0 ['ENST00000477908.1_1_1:109358795-109359618:-|nuORF'] 69147 4447 LTRRCRTASHP True H1975_Epitope_Rep3 1296.68332134944 1296.68167490379 22.228 3 -0.7049564227556353 0.2163870617343552 1.0 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'ENST00000310842.8_1_7:76239320-76240795:-|nuORF'] 67368 12595 LSSISSVVGP True PC9_epitope_Rep1 944.51786165044 944.51676993586 53.316 2 -0.7049900026253257 0.2163870617343552 1.0 ['ADAMTS3|p.G1110V|1|0.16|ENSG00000156140|chr4:72283425-72283425|C/A|missense_variant'] 32696 15209 GGTDFPAAQT True PC9_epitope_Rep4 963.4297749220299 963.42922496793 66.426 1 -0.7050023169848757 0.2163870617343552 1.0 ['nc|ENSG00000144749|Q96JA1-2|LRIG1'] 64583 13038 LPSMPARCPL True PC9_epitope_Rep5 1083.55690709479 1083.55580993586 55.154 2 -0.7050553910695143 0.2164257912681411 1.0 ['ENST00000294599.8_1_1:3417793-3417832:-|nuORF'] 11617 23539 DGGWCWGC True PC9_epitope_Rep4 882.2788943383799 882.27778993586 98.848 2 -0.7050731825583891 0.2164257912681411 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 131930 21924 VTRSRVSI True PC9_epitope_Rep4 916.54541381096 916.54430993586 92.539 2 -0.7050897669584449 0.2164343470914796 1.0 ['LTR12C_dup1156|chr6:63273974-63275493:-|1.1245883398790455|0.0455730948213315|4.63|468.0|63|2|anti-sense'] 18950 19324 ELEKIGLNK True PC9_epitope_Rep5 1042.60225998074 1042.60116993586 79.374 2 -0.7051064683194554 0.2164343470914796 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A', 'ENST00000468534.1_1_2:55559700-55561478:-|nuORF'] 119081 18749 VAGPAPVAAL True PC9_epitope_Rep3 864.5069030439199 864.50580993586 77.339 2 -0.7052429797854757 0.2165215948347388 1.0 ['ENST00000441394.1_1_13:30880936-30881176:-|nuORF'] 102747 13249 SMYDYYDMDNY True H1975_Epitope_Rep2 1478.5006335567798 1478.4995299358602 56.092 2 -0.7052839787276463 0.21653341378790164 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 13192 6404 DLSCPAPSP True NCI_RA007_Epitope_Rep5 885.3902186091699 885.38912993586 31.305 2 -0.7053741701768524 0.21654196584806612 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.E2290Kfs*32|1|0.41|ENSG00000167548|chr12:49040902-49040902|C/-|frameshift_variant', 'KMT2D|p.P2354Lfs*30|1|0.08|ENSG00000167548|chr12:49040709-49040709|G/-|frameshift_variant'] 62302 5031 LLGAAHRL True H1975_Epitope_Rep1 849.51847078713 849.51736993586 24.421 2 -0.7053940557206386 0.21654196584806612 1.0 ['ENSG00000105135|ENST00000263383|ILVBL', 'ENST00000599324.1_1_19:15235627-15235870:-|nuORF'] 29684 16987 FVLNHLWL True PC9_epitope_Rep1 1040.5807366905199 1040.57962993586 70.163 2 -0.7054076825335445 0.2165537839590907 1.0 ['ENSG00000105428|ENST00000222033|ZNRF4'] 12296 6701 DINELTNHM True NCI_RA007_Epitope_Rep2 1085.48115887189 1085.48006993586 30.679 2 -0.7054253814002214 0.21656233501772382 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3'] 13106 11858 DLQQLQLFTEY True H1975_Epitope_Rep1 1396.68744615668 1396.68634993586 50.609 2 -0.70547943696147 0.21656233501772382 1.0 ['ENSG00000184743|ENST00000398868|ATL3'] 92599 20606 RMSCSPCLLPA True NCI_RA007_Epitope_Rep5 1176.54535643492 1176.54370490379 86.202 3 -0.7054855410610464 0.21657415228671414 1.0 ['ENST00000531828.5_2_1:52195717-52211230:+|nuORF'] 127165 10957 VLVCSGCHCNY True PC9_epitope_Rep1 1196.47767079792 1196.4765699358602 47.034 2 -0.7055454238738597 0.21660105283798664 1.0 ['ENST00000571914.1_1_17:79605115-79605256:+|nuORF'] 11480 17632 DFGLDVYLT True H1975_Epitope_Rep1 1041.5018772331298 1041.50137496793 73.364 1 -0.7056555411004377 0.21661161636728354 1.0 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 72147 19221 MFVFKERWFWR True PC9_epitope_Rep1 1630.8231092975398 1630.82200993586 78.731 2 -0.7056618564757088 0.21661161636728354 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 42229 11076 IDSLSMDSFL True H1975_Epitope_Rep1 1126.52162670154 1126.5205299358602 47.567 2 -0.705663649854249 0.21661161636728354 1.0 ['ENST00000381989.3_1_13:25020883-25021248:-|nuORF'] 108903 5394 TAAPVTSTG True PC9_epitope_Rep3 803.4024975450301 803.40140993586 25.821 2 -0.7056753607642665 0.21661161636728354 1.0 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-3|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'chr3:195769152-195771652|347|13.67|0.74|4.21|-|ENST00000480843|MUC4,MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4'] 36291 22083 GVEDCMIC True H1975_Epitope_Rep1 868.3128968885999 868.31178993586 91.859 2 -0.7056763095774652 0.21661161636728354 1.0 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1'] 5080 5974 ALLESSCENKR True NCI_RA007_Epitope_Rep1 1248.6132356706 1248.6115949037899 27.283 3 -0.7057245573511691 0.21661161636728354 1.0 ['nc|ENSG00000132561|O00339-3|MATN2', 'nc|ENSG00000132561|O00339-2|MATN2', 'ENSG00000132561|ENST00000254898|MATN2', 'MATN2|p.G137Wfs*47|1|0.46|ENSG00000132561|chr8:97931217-97931218|-/T|frameshift_variant'] 46179 5577 ISLRSHNPV True NCI_RA007_Epitope_Rep2 1021.56687753153 1021.56578993586 26.308 2 -0.7057934636556963 0.21662343146718147 1.0 ['ENST00000567481.1_2_16:75182955-75200774:+|nuORF'] 47051 14931 ITSDGLSFLF True PC9_epitope_Rep1 1098.55972646242 1098.5586299358602 62.256 2 -0.7058039056482216 0.21663524621069302 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 84801 18345 QDYQTWLDL True NCI_RA007_Epitope_Rep3 1180.540053647 1180.53894993586 80.339 2 -0.7059248999156079 0.21668576943958498 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'ENSG00000184304|ENST00000331968|PRKD1'] 89516 8898 QYLEKQQEL True NCI_RA007_Epitope_Rep5 1177.5979028762897 1177.5968099358602 40.889 2 -0.7059635071603432 0.21668576943958498 1.0 ['ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1'] 117880 16916 TWERMWMHVAK True NCI_RA007_Epitope_Rep1 1473.70094555953 1473.6998499358601 69.928 2 -0.7059956416617974 0.21668576943958498 1.0 ['ENST00000493155.1_1_1:213124884-213125846:+|nuORF', 'nc|ENSG00000143494|Q86V25-4|VASH2', 'nc|ENSG00000143494|Q86V25-5|VASH2', 'ENSG00000143494|ENST00000517399|VASH2'] 134145 12910 VYLDRYLAI True PC9_epitope_Rep3 1124.62299542532 1124.6213549037902 54.679 3 -0.7060130882042385 0.21671266343935214 1.0 ['GALR2|p.S120Y|1|0.2|ENSG00000182687|chr17:76075242-76075242|C/A|missense_variant'] 112490 16816 TLDNYSSSI True PC9_epitope_Rep3 998.4556553167001 998.45454993586 69.835 2 -0.7061033841748324 0.21673301966461575 1.0 ['ENSG00000198722|ENST00000635942|UNC13B'] 41045 8335 HTLFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep1 1218.5703085088896 1218.56920993586 36.992 2 -0.7061135152405259 0.21673301966461575 1.0 ['CON__P02769'] 64481 7916 LPQFYDPV True NCI_RA007_Epitope_Rep1 977.4858332461698 977.48472993586 34.785 2 -0.7061898118827415 0.21673301966461575 1.0 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'ENST00000454469.6_1_9:214976-340322:+|nuORF'] 30498 9021 GAGEERVTSQF True NCI_RA007_Epitope_Rep2 1179.5520153130299 1179.55090993586 39.691 2 -0.7062543307554989 0.21677499132900035 1.0 ['ENST00000529313.5_1_11:17298611-17304373:+|nuORF'] 136103 20495 WRLNRMFL True NCI_RA007_Epitope_Rep5 1134.61205390214 1134.6103949037902 85.778 3 -0.7062853292311011 0.21678680218355098 1.0 ['ENST00000525154.1_1_11:9779436-9779646:-|nuORF'] 69226 6519 LTSRDRKIMC True PC9_epitope_Rep2 1221.63219729337 1221.63055490379 30.491 3 -0.7064400942208747 0.21690416949408128 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 101120 6953 SLGLSQLQV True NCI_RA007_Epitope_Rep3 943.53384606775 943.53274993586 34.456 2 -0.7065258498305429 0.21693105736172266 1.0 ['ENSG00000131668|ENST00000253968|BARX1', 'nc|ENSG00000131668|Q9HBU1-2|BARX1'] 42772 6354 IENEAGRDV True H1975_Epitope_Rep3 1001.4777877436098 1001.47668993586 29.432 2 -0.7065635747747625 0.21696648019421283 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 122213 9500 VGAPGYSR True PC9_epitope_Rep2 805.40825163181 805.40714993586 41.885 2 -0.7065952539035832 0.21696648019421283 1.0 ['ENSG00000112293|ENST00000230036|GPLD1'] 58926 24921 LETLFRIRTI True PC9_epitope_Rep3 1260.7554065772 1260.75376490379 101.22 3 -0.7066001742156078 0.21696648019421283 1.0 ['ENSG00000158477|ENST00000289429|CD1A'] 54776 8604 KYNDKKRKEEK True NCI_RA007_Epitope_Rep3 1464.8048759507599 1464.80323490379 40.919 3 -0.706626331880282 0.21698355020128765 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 12642 11175 DLCYDAKY True H1975_Epitope_Rep3 989.41643335701 989.41532993586 48.083 2 -0.7066268292860219 0.21698355020128765 1.0 ['ENST00000486196.1_1_12:75765229-75784650:-|nuORF'] 60190 20974 LGPITTISI True PC9_epitope_Rep4 913.5484335027301 913.54788496793 88.838 1 -0.7066286442976534 0.21698355020128765 1.0 ['SLC1A6|p.Q450P|1|0.09|ENSG00000105143|chr19:14954150-14954150|T/G|missense_variant'] 17399 18127 EHDPQYAVIL True PC9_epitope_Rep3 1183.5873381925899 1183.58624993586 74.926 2 -0.7066318860584039 0.21698355020128765 1.0 ['ENSG00000158417|ENST00000289371|EIF5B', 'EIF5B|p.K1080Nfs*7|1|0.12|ENSG00000158417|chr2:99394868-99394869|-/TGTC|frameshift_variant'] 101455 5794 SLKYLWEKDYQ True NCI_RA007_Epitope_Rep1 1471.73473070227 1471.7330849037899 26.591 3 -0.7066762512960156 0.2170104336288523 1.0 ['ENSG00000182836|ENST00000377801|PLCXD3'] 57973 4900 LEGTCWVGP True NCI_RA007_Epitope_Rep2 960.4375031547598 960.43640993586 23.682 2 -0.7068198044516277 0.21707927509573924 1.0 ['NHLRC4|p.P7T|1|0.34|ENSG00000257108|chr16:568066-568066|C/A|missense_variant'] 58689 24582 LERPLELRVRV True PC9_epitope_Rep4 1378.84086753666 1378.8397699358602 103.04 2 -0.7068595161625807 0.21707927509573924 1.0 ['ENSG00000134760|ENST00000257192|DSG1'] 113252 5948 TLRERLRHWQS True PC9_epitope_Rep2 1480.801127983 1480.79947490379 28.269 3 -0.7068908835266576 0.21708780605475816 1.0 ['ENST00000392088.6_1_2:220119039-220119258:-|nuORF'] 122913 4247 VGHRATAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 23.329 2 -0.7068936150302704 0.21708780605475816 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 44349 14920 ILDWDYYI True PC9_epitope_Rep5 1099.52261267771 1099.5215099358602 62.394 2 -0.7069268069861047 0.2170996095222301 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 111773 13423 TIKEKAQAT True PC9_epitope_Rep5 988.5553097883198 988.55420993586 56.647 2 -0.7070475510015741 0.2171468198332655 1.0 ['ENSG00000166569|ENST00000299721|CPLX4'] 131722 11098 VTPEIPAGLP True PC9_epitope_Rep1 992.5542471591598 992.55314993586 47.575 2 -0.70708641470813 0.2171468198332655 1.0 ['ENSG00000125657|ENST00000245817|TNFSF9'] 74670 17844 NGNGLRRRK True NCI_RA007_Epitope_Rep4 1069.6217070690498 1069.62060993586 77.26 2 -0.7071197315717337 0.2171468198332655 1.0 ['CDH4|p.A161G|1|0.16|ENSG00000179242|chr20:61773088-61773088|C/G|missense_variant'] 108964 5851 TAEQPPSP True H1975_Epitope_Rep2 825.3868474808899 825.38574993586 27.494 2 -0.7071230074142288 0.2171468198332655 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'SATB1|p.D441Pfs*41|1|0.48|ENSG00000182568|chr3:18386500-18386501|TT/-|frameshift_variant'] 4546 21553 AKKIKRPKFTV True NCI_RA007_Epitope_Rep5 1314.8499756683798 1314.84832490379 89.99 3 -0.7071373521802743 0.2171520742884708 1.0 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'nc|ENSG00000205221|Q6UXI7-3|VIT'] 136527 14927 WWDIYYTLFEK True H1975_Epitope_Rep3 1562.7445671099797 1562.74346993586 62.804 2 -0.707137984976974 0.2171520742884708 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 31615 15528 GEFEGFVAV True NCI_RA007_Epitope_Rep4 953.4494477374498 953.4488949679301 67.442 1 -0.7071387331907771 0.2171520742884708 1.0 ['DPP3-FKBP2|1|fusion', 'nc|ENSG00000254986|Q9NY33-4|DPP3', 'DPP3-FKBP2|2|fusion', 'ENSG00000254986|ENST00000531863|DPP3', 'ENST00000526250.5_1_11:66259118-66263112:+|nuORF'] 108863 6523 TAAEEFAFLMQ True NCI_RA007_Epitope_Rep1 1256.5747249035599 1256.57362993586 29.387 2 -0.7072529734883619 0.2171907503994694 1.0 ['ENSG00000265203|ENST00000584701|RBP3', 'RBP3|p.R577Afs*124|1|0.23|ENSG00000265203|chr10:47350211-47350211|C/-|frameshift_variant', 'RBP3|p.P715Hfs*43|1|0.18|ENSG00000265203|chr10:47350624-47350624|C/-|frameshift_variant'] 48536 13891 KALEKHRMYM True H1975_Epitope_Rep2 1305.66858280209 1305.66694490379 58.576 3 -0.7072550825345257 0.2171907503994694 1.0 ['nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1', 'ENST00000505068.5_1_4:71691792-71705589:-|nuORF'] 124695 17296 VGYRIYDVVL True PC9_epitope_Rep2 1195.6601092100298 1195.65900993586 71.787 2 -0.7072875624636923 0.21719927645462767 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'KDR|p.P1105Mfs*9|1|0.13|ENSG00000128052|chr4:55089466-55089467|-/CCTTCTTCATT|frameshift_variant', 'KDR|p.P1233Lfs*2|1|0.16|ENSG00000128052|chr4:55082602-55082602|C/-|frameshift_variant', 'nc|ENSG00000128052|P35968-2|KDR', 'nc|ENSG00000128052|P35968-3|KDR'] 3471 9028 AGLEGTHVGLS True PC9_epitope_Rep1 1039.52982331647 1039.5287299358602 39.576 2 -0.7073180071794757 0.21719927645462767 1.0 ['ENST00000438380.1_1_9:127533958-127535075:+|nuORF'] 117213 7288 TVLLLKKKKK True NCI_RA007_Epitope_Rep4 1197.85366406649 1197.85201490379 34.669 3 -0.7074639545918137 0.21725629701089824 1.0 ['ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 34065 11812 GLVSEVLL True H1975_Epitope_Rep2 828.49566965388 828.49456993586 50.512 2 -0.7075504786447671 0.21728186655010776 1.0 ['ENSG00000103351|ENST00000576634|CLUAP1', 'CLUAP1|p.V43L|1|0.28|ENSG00000103351|chr16:3504824-3504824|G/T|missense_variant'] 79011 4716 PALAGPPAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 24.686 2 -0.707602948295771 0.21728186655010776 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 62349 16561 LLGLKKLSFYY True NCI_RA007_Epitope_Rep2 1343.78530972315 1343.7842099358602 69.147 2 -0.7076221538445696 0.21728186655010776 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 23231 4690 EVNAVQFSP True NCI_RA007_Epitope_Rep3 989.4818104948898 989.48070993586 25.393 2 -0.7076233678380018 0.21728186655010776 1.0 ['nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1', 'nc|ENSG00000085978|Q676U5-3|ATG16L1', 'ENST00000479942.5_1_2:234160473-234198706:+|nuORF', 'ENST00000472242.1_1_2:234186198-234191411:+|nuORF'] 2989 15596 AFHGTLDIVP True PC9_epitope_Rep1 1068.56039516876 1068.55928993586 64.81 2 -0.7076242499228883 0.21728186655010776 1.0 ['VGLL3|p.V302L|1|0.3|ENSG00000206538|chr3:86968623-86968623|C/G|missense_variant'] 113156 11867 TLPPEKLPW True NCI_RA007_Epitope_Rep5 1079.6015317047497 1079.6004299358601 52.303 2 -0.7076466105293676 0.21728186655010776 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 30901 8637 GAQALQLFESH True H1975_Epitope_Rep1 1199.59348620219 1199.5923899358602 38.151 2 -0.7077560188697322 0.21736902393440646 1.0 ['ENSG00000126088|ENST00000246337|UROD'] 23488 8393 EVVDTFTITM True NCI_RA007_Epitope_Rep5 1154.5529268298199 1154.55182993586 38.96 2 -0.7077985121253411 0.21738933851788217 1.0 ['ENSG00000106034|ENST00000310396|CPED1'] 109638 9795 TEALKEHEK True NCI_RA007_Epitope_Rep3 1083.5560380643099 1083.5549499358601 45.592 2 -0.7078218967786237 0.21738933851788217 1.0 ['ENST00000478275.1_1_1:212860135-212870482:-|nuORF', 'ENSG00000123685|ENST00000243440|BATF3'] 52341 25174 KKKKKQHKIPT True PC9_epitope_Rep1 1362.8823384258196 1362.88069490379 101.72 3 -0.7078238587364012 0.21738933851788217 1.0 ['ENSG00000129518|ENST00000250454|EAPP'] 103609 16473 SPSVPRPRGRG True H1975_Epitope_Rep1 1164.64758746372 1164.64648993586 68.732 2 -0.7078733073336576 0.21741620448517 1.0 ['ASTL|p.G285V|1|0.19|ENSG00000188886|chr2:96129844-96129844|C/A|missense_variant'] 49451 5764 KEYESYSDF True NCI_RA007_Epitope_Rep2 1166.4767846840998 1166.4756899358601 27.037 2 -0.70789325279716 0.217453548124595 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 117533 5927 TVSDSGAGPV True PC9_epitope_Rep2 888.4188758851599 888.41776993586 28.189 2 -0.7079148863736087 0.217453548124595 1.0 ['ENST00000360104.7_1_7:151836847-151841837:-|nuORF'] 136805 7329 YAAALSNG True PC9_epitope_Rep3 765.3657181134901 765.36462993586 33.2 2 -0.707944758707347 0.217453548124595 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'SALL1|p.Q1236R|1|0.44|ENSG00000103449|chr16:51137380-51137380|T/C|missense_variant'] 75274 9422 NIIKKINVT True NCI_RA007_Epitope_Rep5 1041.65462990677 1041.6535299358602 42.88 2 -0.7079815649705072 0.217453548124595 1.0 ['ENSG00000165935|ENST00000535986|SMCO2'] 121532 15982 VFATDDGF True PC9_epitope_Rep1 870.3759484440199 870.37484993586 66.284 2 -0.707989316733995 0.217453548124595 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 42146 14950 IDNYVRRWDWK True NCI_RA007_Epitope_Rep2 1549.77899555609 1549.77788993586 62.833 2 -0.708019598606697 0.217453548124595 1.0 ['HCAR2|p.M84I|1|0.28|ENSG00000182782|chr12:122703032-122703032|C/T|missense_variant'] 19962 16775 ELVSMIKTY True H1975_Epitope_Rep2 1082.56818297114 1082.5670899358602 69.763 2 -0.7080206348141879 0.217453548124595 1.0 ['nc|ENSG00000130024|Q8WUB8-3|PHF10', 'nc|ENSG00000130024|Q8WUB8-2|PHF10', 'ENSG00000130024|ENST00000339209|PHF10'] 73114 20751 MRKWPRQYEWF True H1975_Epitope_Rep3 1625.79253744525 1625.79144993586 86.705 2 -0.708069314037245 0.21746534056660638 1.0 ['ENSG00000175874|ENST00000324768|CREG2'] 73981 4351 NDAPQFLEK True NCI_RA007_Epitope_Rep5 1060.5189242795998 1060.5178299358602 23.348 2 -0.7081230022474476 0.21747385551972515 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'nc|ENSG00000132554|Q8NE09-2|RGS22'] 135524 25045 WKKKKKKKK True PC9_epitope_Rep3 1228.8495817455598 1228.84848993586 101.68 2 -0.708126150189014 0.21747385551972515 1.0 ['ENST00000433510.2_1_17:46713876-46724046:-|nuORF'] 81669 11242 PLLPWLRPWA True H1975_Epitope_Rep1 1247.7178988696699 1247.71680993586 48.218 2 -0.7081695916319812 0.21748236995961667 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 75616 10886 NLDSARFRYFI True H1975_Epitope_Rep3 1400.7200836976397 1400.71898993586 46.956 2 -0.7081753140102764 0.21748236995961667 1.0 ['ENSG00000166800|ENST00000280706|LDHAL6A'] 85327 10396 QESLVVSEV True H1975_Epitope_Rep3 988.50769088956 988.50658993586 45.045 2 -0.7082402648559527 0.21749088388632734 1.0 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 4832 8491 ALEIHYRSHT True H1975_Epitope_Rep1 1225.62036965637 1225.61926993586 37.59 2 -0.70827431632552 0.21749088388632734 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3'] 67275 12845 LSRRSSLV True NCI_RA007_Epitope_Rep1 916.54541381096 916.54430993586 53.954 2 -0.708317895996542 0.21752953230472516 1.0 ['nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2', 'ENST00000443339.5_1_3:9475845-9476039:+|nuORF', 'ENST00000493918.5_1_3:9475925-9476039:+|nuORF', 'ENST00000431285.5_1_3:9475191-9476039:+|nuORF'] 136665 12230 WWRWWEHRLLW True NCI_RA007_Epitope_Rep1 1752.8789843808797 1752.87733490379 51.541 3 -0.708333216373286 0.21752953230472516 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 100727 4382 SLDTLMWIYHF True H1975_Epitope_Rep3 1424.67985867844 1424.6787699358601 21.976 2 -0.7083767147174778 0.2175531113454874 1.0 ['ENSG00000205710|ENST00000381365|C17orf107'] 100816 17429 SLEKHPEVP True PC9_epitope_Rep6 1034.53965972418 1034.53856993586 79.655 2 -0.7083962481373199 0.2175531113454874 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 1716 9441 AEGPNRLLYKD True H1975_Epitope_Rep3 1274.66190011518 1274.66080993586 41.316 2 -0.7084468874872192 0.21762516761838754 1.0 ['ENSG00000176454|ENST00000314891|LPCAT4', 'ENST00000563748.5_1_15:34651330-34651973:-|nuORF'] 84635 11209 QDFLCMFSL True PC9_epitope_Rep5 1102.48273909502 1102.48164993586 48.103 2 -0.70847653703443 0.21765202193696137 1.0 ['ENST00000313349.3_1_2:64861451-64861622:-|nuORF'] 97069 14865 SDEFRRNCTQR True H1975_Epitope_Rep2 1410.6422443831 1410.64060490379 62.331 3 -0.7085909438645679 0.2176723163841808 1.0 ['ENSG00000233757|ENST00000425953|ZNF892'] 35086 9833 GQVPHSLETLY True NCI_RA007_Epitope_Rep2 1242.6244519773002 1242.62334993586 42.873 2 -0.7085976396713495 0.2176723163841808 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 56064 10385 LATECLPLDK True H1975_Epitope_Rep1 1101.5739966275698 1101.57288993586 44.895 2 -0.708618143440771 0.2176723163841808 1.0 ['ENSG00000174173|ENST00000309922|TRMT10C'] 108842 14242 SYWSMVQTP True PC9_epitope_Rep5 1097.48518162317 1097.48408993586 59.787 2 -0.7086355011095598 0.2176775437645003 1.0 ['ENST00000536938.1_1_12:48543600-48543777:-|nuORF'] 10670 8137 CPVVTSTE True PC9_epitope_Rep5 834.3793195723 834.37822993586 36.239 2 -0.7086954467730885 0.2176775437645003 1.0 ['MUC17|p.S3075C|1|0.29|ENSG00000169876|chr7:101040639-101040639|A/T|missense_variant'] 82478 8648 PPQPPPPPP True PC9_epitope_Rep3 922.4912529797799 922.49014993586 38.216 2 -0.7087030879534171 0.2176775437645003 1.0 ['HOXD3|p.S341Tfs*88|1|0.15|ENSG00000128652|chr2:176171993-176171996|GCGA/-|frameshift_variant', 'ENSG00000128652|ENST00000683222|HOXD3', 'ENSG00000077044|ENST00000264057|DGKD', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'DGKD-SAG|2|fusion', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 112509 15382 TLDQQVVI True PC9_epitope_Rep1 914.5072969667399 914.50618993586 63.985 2 -0.7087843654896314 0.2177161795721603 1.0 ['ENSG00000146263|ENST00000683635|MMS22L'] 76634 9783 NQRWEWLAWWR True NCI_RA007_Epitope_Rep1 1629.7953143265697 1629.7942099358602 42.056 2 -0.7087912460155783 0.2177161795721603 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 89772 24870 RAIKGFGGIG True PC9_epitope_Rep1 974.5661492555398 974.56504993586 100.57 2 -0.7088415235261342 0.2177279643271418 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 87489 19779 QQELLDKIKEE True H1975_Epitope_Rep3 1371.7245599413898 1371.72346993586 82.821 2 -0.7088875585359398 0.2177548130517309 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-1|ZMYM6', 'ENST00000471566.1_1_1:35496087-35496240:-|nuORF', 'ENST00000493328.5_1_1:35480755-35496240:-|nuORF', 'nc|ENSG00000163867|O95789-2|ZMYM6', 'nc|ENSG00000163867|O95789-4|ZMYM6'] 12731 7348 DLEEKVTR True NCI_RA007_Epitope_Rep5 988.5189242795999 988.51782993586 34.942 2 -0.7089195575074897 0.2177665968696805 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 83508 16239 PTSVAIASI True PC9_epitope_Rep1 857.48583324617 857.48528496793 67.281 1 -0.7089243073570154 0.2177934442034225 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 56442 12034 LDEKDLKP True H1975_Epitope_Rep1 956.5178616504398 956.51676993586 51.298 2 -0.708944927183676 0.21780522708443173 1.0 ['ENST00000587449.1_1_18:35109110-35145508:-|nuORF', 'nc|ENSG00000161082|Q8N6W0-2|CELF5', 'nc|ENSG00000101489|Q9BZC1-5|CELF4', 'nc|ENSG00000101489|Q9BZC1-3|CELF4', 'nc|ENSG00000101489|Q9BZC1-2|CELF4', 'nc|ENSG00000101489|Q9BZC1-4|CELF4', 'ENSG00000161082|ENST00000292672|CELF5', 'ENSG00000101489|ENST00000420428|CELF4'] 139217 12969 YLFIREFIMEK True H1975_Epitope_Rep3 1487.7846581001497 1487.7835699358602 55.118 2 -0.7089640203481764 0.21781700961046005 1.0 ['ENST00000396056.6_1_3:44700855-44701443:+|nuORF'] 60042 6236 LGLAGAQK True H1975_Epitope_Rep3 756.4493881678001 756.44828993586 28.999 2 -0.7089875962479825 0.21784057359763812 1.0 ['ENST00000360325.11_1_17:7165522-7165789:-|nuORF', 'ENSG00000236543|ENST00000430816|unknown'] 67659 14052 LSVTWSHLFCR True PC9_epitope_Rep1 1347.6757763575101 1347.67466993586 58.888 2 -0.7089986662443769 0.21784057359763812 1.0 ['ENST00000491251.1_1_22:30418565-30418601:+|nuORF'] 94433 19418 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 80.595 2 -0.7090752085827492 0.21788248053141335 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 13020 9070 DLNEMENWTMG True H1975_Epitope_Rep3 1338.5220377076998 1338.52094993586 39.873 2 -0.709085088090472 0.21789426118391325 1.0 ['nc|ENSG00000177300|Q8N7P3|CLDN22', 'ENSG00000185758|ENST00000541814|CLDN24'] 23173 8567 EVLGHFPYP True PC9_epitope_Rep2 1057.5232813840498 1057.52218993586 38.313 2 -0.7090967394872127 0.21790275936859863 1.0 ['ENSG00000090266|ENST00000247866|NDUFB2'] 91763 12086 RKFLLASV True PC9_epitope_Rep5 932.5807366905199 932.57962993586 51.483 2 -0.7091364676932579 0.21790275936859863 1.0 ['ENSG00000165490|ENST00000533655|DDIAS', 'nc|ENSG00000165490|Q8IXT1-2|DDIAS'] 132068 25033 VTTISLLLLA True NCI_RA007_Epitope_Rep5 1042.66379760814 1042.6627099358602 103.79 2 -0.7093574213216978 0.21794466284096214 1.0 ['ENST00000250457.7_1_14:34394881-34395019:-|nuORF'] 134147 22547 VYLFTGELYP True PC9_epitope_Rep3 1200.60667665484 1200.60556993586 91.998 2 -0.7093752773893923 0.21795644184715487 1.0 ['nc|ENSG00000197847|A6NK97|SLC22A20P'] 16602 5555 EENRDFLAA True PC9_epitope_Rep5 1063.4934378077498 1063.4923499358601 26.374 2 -0.7093806589239311 0.21796493764684619 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 45049 13528 IPHFFCDLYV True NCI_RA007_Epitope_Rep4 1252.59506642532 1252.59396993586 59.243 2 -0.7093826961506392 0.21796493764684619 1.0 ['OR1Q1|p.A183V|1|0.12|ENSG00000165202|chr9:122615285-122615285|C/T|missense_variant'] 136629 18952 WWQWLKWRRL True NCI_RA007_Epitope_Rep1 1556.8517070038797 1556.8506099358601 77.861 2 -0.7093839006233789 0.2179767158154736 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 100668 7674 SLDLEGESV True PC9_epitope_Rep5 947.44475627983 947.44364993586 34.462 2 -0.7094016853097974 0.21798849362932618 1.0 ['GAPVD1|p.R1391Gfs*8|1|0.07|ENSG00000165219|chr9:125360595-125360595|C/-|frameshift_variant', 'nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1'] 55852 24456 LAPRAGVQCFK True NCI_RA007_Epitope_Rep5 1188.6437479532399 1188.64210490379 101.54 3 -0.7094749522447246 0.21800027108842002 1.0 ['ENST00000610036.1_1_2:105953638-105953692:-|nuORF'] 27527 15187 FNAVEYINTL True PC9_epitope_Rep6 1182.5920892198599 1182.59098993586 70.497 2 -0.7095079247856162 0.2180323178169661 1.0 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'ENST00000571456.1_1_17:609254-617949:-|nuORF', 'ENST00000575207.5_1_17:560762-617949:-|nuORF', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 120251 3093 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 16.401 2 -0.709568745716958 0.2180323178169661 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 94745 17944 RSHLKKKSIV True PC9_epitope_Rep6 1194.75607528354 1194.75442490379 81.647 3 -0.7095925279545443 0.2180323178169661 1.0 ['ENSG00000178105|ENST00000322536|DDX10'] 126018 11356 VLDSNVKHF True PC9_epitope_Rep5 1057.55564414149 1057.5545499358602 48.677 2 -0.7095998719878628 0.2180323178169661 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 141735 7611 YTWRWVWSWEW True PC9_epitope_Rep1 1683.7622828627896 1683.76063490379 34.096 3 -0.7096855467139273 0.21805258560973406 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 18109 12573 EIIEDLSYMVR True NCI_RA007_Epitope_Rep1 1366.68025260126 1366.67914993586 52.886 2 -0.709738402873835 0.21805258560973406 1.0 ['ENSG00000092847|ENST00000373204|AGO1'] 109126 6336 TALRIKKTL True NCI_RA007_Epitope_Rep2 1042.68626438822 1042.6851699358601 29.252 2 -0.7097450893050455 0.21805258560973406 1.0 ['nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'ENSG00000107779|ENST00000372037|BMPR1A', 'ENSG00000115170|ENST00000434821|ACVR1', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'ENSG00000139567|ENST00000388922|ACVRL1'] 141992 25420 YVIVRCLNLK True PC9_epitope_Rep3 1219.7110992370701 1219.7100099358602 103.22 2 -0.709823996609103 0.21809447799177797 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 120514 4990 VEFHSYFK True NCI_RA007_Epitope_Rep1 1055.50763131991 1055.50652993586 23.493 2 -0.7098630111002678 0.21811474175575968 1.0 ['CSRNP3|p.L535F|1|0.08|ENSG00000178662|chr2:165679600-165679600|G/C|missense_variant'] 127059 14574 VLSSAGFEAI True PC9_epitope_Rep3 992.51786165044 992.51676993586 61.185 2 -0.7098732184734478 0.21811474175575968 1.0 ['nc|ENSG00000177752|Q8N8F6-2|YIPF7'] 122821 10657 VGGSDFEKVQE True H1975_Epitope_Rep1 1193.5564319871298 1193.55532993586 45.948 2 -0.7098986622340621 0.21811474175575968 1.0 ['ENSG00000140650|ENST00000268261|PMM2', 'nc|ENSG00000140650|O15305-2|PMM2', 'ENST00000564030.5_1_16:8891706-8900277:+|nuORF'] 60313 5699 LGSGHHHGPGP True NCI_RA007_Epitope_Rep3 1051.49477522043 1051.49366993586 29.394 2 -0.7099430414174022 0.2181382882611576 1.0 ['ENSG00000105997|ENST00000612286|HOXA3'] 4882 9028 ALERVSSASVP True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 40.075 2 -0.7099594143746569 0.2181382882611576 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1'] 110739 13818 TGGGGGGD True NCI_RA007_Epitope_Rep2 576.21396849936 576.2134249679301 58.399 1 -0.7100112380753366 0.2181618333483904 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 126418 8353 VLKKKKKKKK True PC9_epitope_Rep4 1254.92274668582 1254.9211049037901 39.587 3 -0.7100275374392155 0.2181618333483904 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 85110 12539 QELFEVYSP True H1975_Epitope_Rep3 1110.5233409537 1110.5222499358601 53.43 2 -0.7100431601862698 0.21816703554812775 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.D2035N|1|0.66|ENSG00000183495|chr12:132037992-132037992|G/A|missense_variant'] 55491 6480 LAGGPKPY True NCI_RA007_Epitope_Rep2 801.4384891309301 801.43738993586 29.815 2 -0.7100505137268351 0.21816703554812775 1.0 ['ACP6|p.M269Cfs*2|1|0.2|ENSG00000162836|chr1:147652526-147652526|G/-|frameshift_variant', 'nc|ENSG00000162836|Q9NPH0-2|ACP6', 'ENSG00000162836|ENST00000583509|ACP6'] 132957 10396 VVPDGTVVTV True PC9_epitope_Rep2 984.54916177872 984.54806993586 45.31 2 -0.7100546448433752 0.21816703554812775 1.0 ['RUNX3|p.D100V|1|0.27|ENSG00000020633|chr1:24927714-24927714|T/A|missense_variant'] 142945 4800 YYYYHRQYRRV True NCI_RA007_Epitope_Rep2 1665.81644369397 1665.81478490379 23.3 3 -0.7101891383778858 0.21822068986284046 1.0 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2009625-2011290:+|nuORF'] 118814 7144 VAAHGFRI True NCI_RA007_Epitope_Rep5 869.4871706588499 869.48606993586 34.155 2 -0.7101915199858677 0.21822068986284046 1.0 ['ENSG00000135617|ENST00000258083|PRADC1'] 34416 12098 GPICLWILAVN True PC9_epitope_Rep6 1197.65800103505 1197.65690993586 57.864 2 -0.7102582690448468 0.21826257151460404 1.0 ['ENST00000594376.6_1_2:70221143-70221227:-|nuORF'] 99563 11898 SIEIVIWFL True PC9_epitope_Rep1 1118.6375828603 1118.63648993586 50.632 2 -0.7102865866578814 0.21831950738471267 1.0 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|46', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|46'] 80161 22861 PFSRHGLR True H1975_Epitope_Rep3 968.5304324531598 968.52932993586 95.504 2 -0.7103425504734061 0.2183580988513015 1.0 ['ENSG00000161179|ENST00000292778|YDJC'] 60650 10036 LHLDSLISKNI True PC9_epitope_Rep6 1251.71868671531 1251.71704490379 49.179 3 -0.7103602808063605 0.2183580988513015 1.0 ['ENST00000505330.5_1_3:130569614-130569746:+|nuORF'] 104614 19895 SQRWRLQLRRR True NCI_RA007_Epitope_Rep3 1553.9127441206497 1553.9110949037902 86.714 3 -0.7103958879422729 0.21838492111285077 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 47752 16762 IYELQREFLTV True PC9_epitope_Rep4 1409.7554661468498 1409.75383490379 72.441 3 -0.7104836696748347 0.21838682483290178 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 36379 21703 GVFGGLWGTL True PC9_epitope_Rep3 1005.5283667644899 1005.52726993586 88.772 2 -0.7104886774952769 0.21838682483290178 1.0 ['ENSG00000073464|ENST00000380833|CLCN4', 'nc|ENSG00000073464|P51793-2|CLCN4'] 83053 21332 PSLINLLV True PC9_epitope_Rep2 867.5429541994699 867.54184993586 87.518 2 -0.7105010885555267 0.21838682483290178 1.0 ['nc|ENSG00000151687|Q7Z5J8-3|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-2|ANKAR', 'ENSG00000151687|ENST00000684021|ANKAR'] 124801 17054 VHFQDFGSL True PC9_epitope_Rep2 1048.4977949121999 1048.49668993586 70.85 2 -0.710512584883627 0.21838682483290178 1.0 ['ENST00000558397.1_1_15:83205554-83206687:-|nuORF'] 5404 17579 ALSVSTPEHL True PC9_epitope_Rep4 1052.55022440788 1052.54912993586 75.636 2 -0.7105292057217043 0.21839530332681018 1.0 ['ENSG00000159640|ENST00000290866|ACE', 'nc|ENSG00000159640|P12821-2|ACE', 'ENST00000582678.5_1_17:61557143-61562826:+|nuORF'] 62353 16004 LLGLKKLSFYY True NCI_RA007_Epitope_Rep4 1343.78530972315 1343.7842099358602 69.43 2 -0.7105540267963809 0.21839530332681018 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 22477 4076 ETFGRRSRR True H1975_Epitope_Rep3 1163.6271863723098 1163.6260899358601 20.804 2 -0.710606767588903 0.21843717541509236 1.0 ['ENST00000344096.3_1_12:68042885-68050896:+|nuORF'] 20902 8545 EQLRCHFTWE True NCI_RA007_Epitope_Rep1 1347.6030053400698 1347.60190993586 37.24 2 -0.710669260490572 0.2184489402697495 1.0 ['IFIT1|p.S394Yfs*3|1|0.1|ENSG00000185745|chr10:89403455-89403456|-/ATGG|frameshift_variant', 'ENSG00000185745|ENST00000371804|IFIT1'] 68870 5274 LTMYNFRYP True NCI_RA007_Epitope_Rep1 1203.57466533391 1203.5735699358602 24.596 2 -0.7107132036773011 0.21845412809513057 1.0 ['SYNE2|p.V4485L|1|0.13|ENSG00000054654|chr14:64125109-64125109|G/T|missense_variant'] 15728 10520 ECDDCDSC True NCI_RA007_Epitope_Rep4 888.1935696015601 888.19246993586 47.312 2 -0.7107191210416427 0.21845412809513057 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 89774 24038 RAIKGFGGIG True PC9_epitope_Rep4 974.5661492555398 974.56504993586 100.93 2 -0.7107212974711463 0.21845412809513057 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 19615 4610 ELQQQNTAP True H1975_Epitope_Rep2 1027.4934378077498 1027.4923499358601 22.835 2 -0.7107866036608753 0.21845792634288036 1.0 ['CON__Q58D62'] 18313 5888 EISEPRLQNYD True H1975_Epitope_Rep3 1362.6415585934199 1362.6404699358602 27.657 2 -0.7108113114304231 0.21845792634288036 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 109864 13619 TEEQMAQQPPK True H1975_Epitope_Rep3 1285.5972512532896 1285.59614993586 57.673 2 -0.710863188216521 0.21845792634288036 1.0 ['ENSG00000075240|ENST00000406902|GRAMD4'] 11277 4914 DEGPVAEQVKK True NCI_RA007_Epitope_Rep2 1198.6193665968597 1198.61826993586 23.734 2 -0.7108674372662932 0.21845792634288036 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 100911 24055 SLFAFSLSV True PC9_epitope_Rep5 969.51713337445 969.51602993586 97.51 2 -0.7108679506315257 0.21845792634288036 1.0 ['ENST00000507678.5_1_4:177241188-177241371:+|nuORF', 'ENST00000513139.1_1_4:177241188-177248429:+|nuORF', 'ENSG00000129128|ENST00000503362|SPCS3'] 110559 19226 TFQFSVPLP True PC9_epitope_Rep3 1034.5436824754597 1034.5425899358602 79.173 2 -0.710884949555104 0.21845792634288036 1.0 ['SYT3|p.A375Pfs*76|1|0.13|ENSG00000213023|chr19:50629452-50629452|C/-|frameshift_variant'] 100796 11430 SLEGPEGKLK True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 49.083 2 -0.7109105625302571 0.21845792634288036 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant', 'AHNAK|p.E1556*|1|0.3|ENSG00000124942|chr11:62529751-62529752|-/A|frameshift_variant'] 139955 18375 YQCRYEEL True PC9_epitope_Rep2 1102.4753452154598 1102.4742499358601 76.009 2 -0.7109351188549592 0.21845792634288036 1.0 ['CON__Q9NSB4', 'ENSG00000161850|ENST00000257974|KRT82', 'KRT82|p.V320A|1|0.19|ENSG00000161850|chr12:52396992-52396992|A/G|missense_variant'] 36420 14101 GVFREFWEFRT True NCI_RA007_Epitope_Rep4 1472.7200836976394 1472.71898993586 61.52 2 -0.7110014839993403 0.2184748747121766 1.0 ['ENSG00000136449|ENST00000323776|MYCBPAP', 'nc|ENSG00000136449|Q8TBZ2|MYCBPAP', 'MYCBPAP|p.E778Pfs*41|1|0.4|ENSG00000136449|chr17:50527311-50527312|-/ACCACAG|frameshift_variant'] 13315 9451 DLTRNPHTP True NCI_RA007_Epitope_Rep5 1049.5254066423702 1049.5243099358602 42.99 2 -0.7110073831539795 0.2184748747121766 1.0 ['ENST00000526269.2_1_11:128561691-128562836:-|nuORF'] 67892 9099 LTAVSQPRPF True H1975_Epitope_Rep1 1114.6134933707797 1114.6123899358602 39.903 2 -0.7110160582142988 0.2184748747121766 1.0 ['ENST00000589137.5_1_19:36032868-36032973:-|nuORF'] 15399 9885 EAINQILGRRW True H1975_Epitope_Rep1 1354.7469671518197 1354.7458699358601 42.956 2 -0.7110209259954492 0.2184748747121766 1.0 ['LEF1|p.A327E|1|0.32|ENSG00000138795|chr4:108078248-108078248|G/T|missense_variant'] 74474 8144 NEYGSYNKDP True H1975_Epitope_Rep2 1185.4938317305698 1185.49272993586 36.276 2 -0.7110483318852173 0.21848663616662653 1.0 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134217001-134229456:+|nuORF', 'ENST00000531081.5_1_11:134217240-134234349:+|nuORF'] 81947 20647 PLSTGSSFIL True PC9_epitope_Rep4 1020.54916177872 1020.5485749679301 87.575 1 -0.7110631421945643 0.2184951091045899 1.0 ['ENSG00000102241|ENST00000218364|HTATSF1'] 94443 20588 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 85.284 2 -0.7110703577057641 0.2184951091045899 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 134496 8698 VYQEEDEAY True H1975_Epitope_Rep1 1144.4560492395196 1144.4549499358602 38.387 2 -0.7110829889664451 0.2185068697235557 1.0 ['ENSG00000156232|ENST00000286760|WHAMM'] 42138 9023 IDNPEYSPDP True H1975_Epitope_Rep1 1145.48768372097 1145.4865899358601 39.613 2 -0.7111163724227847 0.21852052485855303 1.0 ['ENSG00000179218|ENST00000316448|CALR'] 109568 6191 TDVLATWAPP True H1975_Epitope_Rep2 1069.54441075145 1069.5433099358602 28.786 2 -0.7111291273320606 0.21852052485855303 1.0 ['ENST00000553181.5_1_2:10588860-10589010:+|nuORF'] 117631 22806 TVTIRRQT True PC9_epitope_Rep5 973.5668775315299 973.56578993586 92.715 2 -0.7111564024888201 0.21852052485855303 1.0 ['nc|ENSG00000147481|Q9NSN8-2|SNTG1', 'SNTG1|p.S448Rfs*40|1|0.25|ENSG00000147481|chr8:50752060-50752060|C/-|frameshift_variant', 'ENSG00000147481|ENST00000642720|SNTG1', 'SNTG1|p.G66R|1|0.2|ENSG00000147481|chr8:50438576-50438576|G/A|missense_variant', 'SNTG1|p.E77Rfs*3|1|0.33|ENSG00000147481|chr8:50449675-50449676|-/A|frameshift_variant'] 28739 10783 FSSGYGTDVSR True NCI_RA007_Epitope_Rep1 1174.5254662120199 1174.52487496793 45.939 1 -0.7111879822143121 0.21852052485855303 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 63658 24541 LMRFRKPWPLR True PC9_epitope_Rep1 1498.8707281962998 1498.86962993586 99.255 2 -0.7112399099758606 0.21852052485855303 1.0 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 27146 13059 FLKMNKWCEYF True NCI_RA007_Epitope_Rep5 1507.69921422403 1507.6981099358602 56.908 2 -0.7113005397033558 0.21854404285413342 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 14445 8673 DTEKLKMYHSL True H1975_Epitope_Rep1 1363.68058695443 1363.6794899358601 38.29 2 -0.7113275979459116 0.21854404285413342 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 52601 14074 KLLEILKQGF True PC9_epitope_Rep2 1187.7277948470298 1187.72614490379 59.411 3 -0.7114050125786396 0.21861598880512798 1.0 ['ENST00000552545.1_1_12:53126121-53126646:+|nuORF'] 14540 5511 DTRPQWACTGP True H1975_Epitope_Rep2 1230.5451561107798 1230.5440499358601 26.21 2 -0.7114122427643159 0.21862445644814252 1.0 ['ENST00000398988.7_2_17:25951918-25952683:+|nuORF'] 13355 22189 DLWAIGCLVTE True NCI_RA007_Epitope_Rep5 1218.5954603481398 1218.59380490379 92.493 3 -0.7114132008349758 0.21862445644814252 1.0 ['CDKL2|p.V185L|1|0.2|ENSG00000138769|chr4:75605624-75605624|C/A|missense_variant'] 70653 26262 LWHIWRERN True PC9_epitope_Rep2 1308.68397297244 1308.68233490379 107.15 3 -0.7114770253405565 0.21863621317444554 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 76312 6581 NPRRWWRWCWQ True H1975_Epitope_Rep1 1672.7946031339197 1672.7929649037899 30.373 3 -0.71150753557515 0.21864327731724564 1.0 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 20230 11407 ENLLKSLQAPE True H1975_Epitope_Rep1 1240.66631678928 1240.66520993586 48.856 2 -0.7115077010061455 0.21864327731724564 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 89277 6775 QVVTGNVP True H1975_Epitope_Rep3 812.4392174069199 812.43812993586 31.016 2 -0.7115766156253116 0.21864327731724564 1.0 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 13688 14904 DPSLLHLLY True H1975_Epitope_Rep2 1069.58079626017 1069.5796899358602 62.482 2 -0.7115806386334869 0.21864327731724564 1.0 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 55445 13054 LAFLKKKKKKL True PC9_epitope_Rep3 1343.9380623967897 1343.9369699358601 55.24 2 -0.7115981457367409 0.21864327731724564 1.0 ['ENST00000375664.8_2_10:28908866-28909124:+|nuORF'] 137645 4739 YEIAKVIWCL True NCI_RA007_Epitope_Rep2 1236.6576666818798 1236.65602490379 23.064 3 -0.7115982776584145 0.21864327731724564 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 18869 14153 ELDRKAAEL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 66.309 2 -0.7116076910034446 0.21864327731724564 1.0 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000567638.1_1_15:75140939-75144521:-|nuORF', 'ENST00000563829.5_1_15:75137426-75144629:-|nuORF'] 70754 17978 LWWWSWRWWKL True H1975_Epitope_Rep1 1731.88267277899 1731.8815699358602 74.904 2 -0.7117671535022085 0.21875376098206764 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 83063 15709 PSLPHEVSTL True PC9_epitope_Rep4 1078.5658744720201 1078.56476993586 68.351 2 -0.7117677690257446 0.21875376098206764 1.0 ['ENSG00000164588|ENST00000303230|HCN1'] 44822 6702 INASFIMSYWK True H1975_Epitope_Rep1 1358.66929399474 1358.66818993586 30.825 2 -0.7117765305448904 0.21875376098206764 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 83279 6514 PTATESLPPWS True NCI_RA007_Epitope_Rep2 1184.57135377528 1184.5702499358601 29.948 2 -0.7117970371960609 0.21876551381764026 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 19612 20258 ELQQLTLTGFG True NCI_RA007_Epitope_Rep1 1205.62920300457 1205.62867496793 83.005 1 -0.7118646407621315 0.21877726629960587 1.0 ['ENST00000591340.5_1_19:37039208-37045651:-|nuORF'] 12325 10694 DIQLEFVRIDP True H1975_Epitope_Rep1 1343.70851595443 1343.7074099358601 46.094 2 -0.7119248180604354 0.2188040616773223 1.0 ['nc|ENSG00000244038|P39656-2|DDOST', 'nc|ENSG00000244038|P39656-3|DDOST', 'ENSG00000244038|ENST00000602624|DDOST', 'nc|ENSG00000244038|P39656|DDOST'] 15171 4314 EAARDQVPP True H1975_Epitope_Rep3 981.4879585044899 981.48686993586 21.71 2 -0.7120674727784752 0.21886094229496358 1.0 ['ENST00000418747.2_1_9:130877356-130879998:-|nuORF'] 61582 21985 LKKKKKKKKK True NCI_RA007_Epitope_Rep4 1283.94929578683 1283.9476649037902 95.336 3 -0.7120838139149098 0.21887269281104743 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 260 10726 AAGGPLYI True H1975_Epitope_Rep2 760.4119400299201 760.41139496793 46.284 1 -0.7121215563317815 0.21889948554408978 1.0 ['ENSG00000177000|ENST00000376590|MTHFR', 'nc|ENSG00000177000|P42898-2|MTHFR'] 82438 10594 PPPLYLTSVP True H1975_Epitope_Rep1 1082.60119735158 1082.60010993586 45.703 2 -0.7122281003090647 0.21893473323205126 1.0 ['ENST00000482818.1_1_22:29724812-29725148:-|nuORF'] 16401 9264 EEKDYKGP True H1975_Epitope_Rep3 964.4501760134398 964.44906993586 40.626 2 -0.7122282324163719 0.21893473323205126 1.0 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 66695 23962 LSLDKVSLG True PC9_epitope_Rep4 930.53859709502 930.53750993586 100.64 2 -0.7122331245115615 0.21893473323205126 1.0 ['ENSG00000204740|ENST00000454679|MALRD1'] 26730 18312 FIYQNPHIF True PC9_epitope_Rep3 1177.5920296502097 1177.5903749037902 75.644 3 -0.7122630952180149 0.21895493652608147 1.0 ['ENSG00000185238|ENST00000331079|PRMT3', 'nc|ENSG00000185238|O60678-2|PRMT3'] 68735 21653 LTLAASLTQP True PC9_epitope_Rep5 1013.57571087973 1013.5746099358599 88.333 2 -0.7123073620777671 0.21895493652608147 1.0 ['MER65-int_dup835|chr19:41770581-41771297:+|1.7873015181353866|0.0130686126071448|7.1|523.0|14|2|sense'] 126542 5866 VLLNEDGK True NCI_RA007_Epitope_Rep2 886.47599683846 886.47488993586 27.436 2 -0.7123351170165697 0.21895493652608147 1.0 ['ENSG00000164961|ENST00000318410|WASHC5'] 76226 21824 NNWRWRGWRRP True PC9_epitope_Rep2 1582.8130300793796 1582.81192993586 89.419 2 -0.7123863166074753 0.21902355383088168 1.0 ['ENST00000463681.1_1_2:61404673-61406216:+|nuORF', 'ENST00000357022.6_2_2:61404673-61404988:+|nuORF'] 4549 8022 AKKKKKKKKG True NCI_RA007_Epitope_Rep5 1170.8288463009796 1170.82720490379 37.547 3 -0.7123896752607606 0.21902355383088168 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 56747 15231 LDLLSYIRTEK True PC9_epitope_Rep3 1349.7554661468496 1349.75383490379 63.735 3 -0.7124442517919108 0.2190320057754783 1.0 ['ENSG00000150627|ENST00000508596|WDR17', 'nc|ENSG00000150627|Q8IZU2|WDR17'] 62179 10276 LLENRTEKRKR True NCI_RA007_Epitope_Rep2 1441.8477438222496 1441.8460949037901 44.561 3 -0.7124567685742872 0.2190320057754783 1.0 ['ENSG00000135913|ENST00000258399|USP37', 'nc|ENSG00000135913|Q86T82-2|USP37', 'ENST00000478329.1_1_2:219394729-219411793:-|nuORF'] 6792 6811 AQEFDIGVYFE True H1975_Epitope_Rep1 1316.5924831426798 1316.5913899358602 31.241 2 -0.7124915217682245 0.21903386873608854 1.0 ['ENSG00000013375|ENST00000513973|PGM3', 'nc|ENSG00000013375|O95394-3|PGM3', 'nc|ENSG00000013375|O95394-4|PGM3'] 22051 17627 ESLMLFDSI True PC9_epitope_Rep5 1053.50524836141 1053.5041499358601 72.813 2 -0.7124949769483602 0.21903386873608854 1.0 ['ENSG00000087258|ENST00000262493|GNAO1'] 85419 11617 QEWQGSLLG True PC9_epitope_Rep2 1016.4927095317598 1016.49160993586 50.011 2 -0.7124964056993296 0.21903386873608854 1.0 ['nc|ENSG00000106327|Q9UP52-2|TFR2', 'ENST00000476304.5_1_7:100218482-100231271:-|nuORF', 'nc|ENSG00000106327|Q9UP52-3|TFR2', 'ENSG00000106327|ENST00000223051|TFR2'] 22898 10164 EVDWEYFY True H1975_Epitope_Rep2 1149.4654917244097 1149.46438993586 44.097 2 -0.712500145685848 0.21903386873608854 1.0 ['ENSG00000169598|ENST00000378209|DFFB'] 33715 11711 GLHSKVIL True PC9_epitope_Rep4 865.53853752537 865.53744993586 52.809 2 -0.7125422593377287 0.21906251409838037 1.0 ['ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A', 'ENST00000487668.5_1_22:20100432-20101310:-|nuORF', 'ENST00000487378.1_1_22:20100088-20100785:-|nuORF'] 107517 13592 SVNVKTQAL True PC9_epitope_Rep2 958.5447451046199 958.54364993586 57.571 2 -0.7125583707839099 0.21906251409838037 1.0 ['ENSG00000159147|ENST00000303071|DONSON'] 99452 7735 SIAQDAKVAL True NCI_RA007_Epitope_Rep3 1014.5709598524599 1014.56986993586 37.548 2 -0.712567482399905 0.21906251409838037 1.0 ['ENSG00000116218|ENST00000367615|NPHS2'] 109058 9331 TAKPGSKTL True PC9_epitope_Rep3 901.5232813840499 901.52218993586 40.831 2 -0.7125935570449775 0.21906251409838037 1.0 ['ENSG00000101098|ENST00000372851|RIMS4', 'nc|ENSG00000101098|Q9H426-2|RIMS4'] 55981 9220 LASCLEPK True PC9_epitope_Rep1 859.4473395624699 859.44624993586 40.317 2 -0.7125952889498589 0.21906251409838037 1.0 ['ENST00000481206.1_1_14:105935538-105936549:+|nuORF'] 140071 9541 YQKQQEDEKFL True H1975_Epitope_Rep1 1454.7041588499794 1454.7030699358602 41.622 2 -0.7126308307110928 0.21907941233966408 1.0 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A'] 59641 15730 LGAAPGLPSPL True PC9_epitope_Rep4 991.57023157647 991.56912993586 68.431 2 -0.7126544981696825 0.21907941233966408 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3', 'SALL3|p.L652Cfs*2|1|0.52|ENSG00000256463|chr18:78993939-78993939|G/-|frameshift_variant'] 56380 14315 LDDSALYLSDK True PC9_epitope_Rep3 1238.60304782638 1238.6019499358601 60.149 2 -0.7126739255137118 0.21907941233966408 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 127848 17171 VPFPRESLSA True PC9_epitope_Rep4 1101.5818588893299 1101.5807699358602 74.054 2 -0.7127319058741223 0.21907941233966408 1.0 ['ENST00000308448.11_1_10:89577578-89577689:-|nuORF'] 44660 12589 ILSQLSNPP True H1975_Epitope_Rep2 967.53384606775 967.53274993586 53.521 2 -0.7128032659646661 0.2190996030313966 1.0 ['ENSG00000205835|ENST00000442080|GMNC'] 12850 7131 DLGVGRQGS True H1975_Epitope_Rep3 887.44609369251 887.44498993586 32.401 2 -0.7128107995318211 0.2190996030313966 1.0 ['ENST00000588658.1_1_19:14266246-14266459:+|nuORF'] 10539 20941 CLNLGKLVQV True PC9_epitope_Rep5 1085.62670090677 1085.6256099358602 85.607 2 -0.7128323508596999 0.2190996030313966 1.0 ['ENST00000502773.5_1_4:157892267-157892438:-|nuORF'] 125020 17709 VICLMFYAL True PC9_epitope_Rep4 1071.54969645603 1071.54858993586 76.142 2 -0.7129481860119444 0.21911134501165325 1.0 ['ENSG00000146859|ENST00000275767|TMEM140'] 12561 2697 DKRRDYLKFKE True NCI_RA007_Epitope_Rep2 1496.8099613311995 1496.80777987172 14.717 4 -0.7129715953998473 0.21911979190160435 1.0 ['ENSG00000168275|ENST00000366615|COA6', 'nc|ENSG00000168275|Q5JTJ3-3|COA6', 'nc|ENSG00000168275|Q5JTJ3|COA6'] 33447 3874 GLAMWFHFHSM True NCI_RA007_Epitope_Rep2 1362.6001688891 1362.5990699358601 19.705 2 -0.7130274632406309 0.21911979190160435 1.0 ['ENSG00000198938|ENST00000362079|MT-CO3'] 101311 12233 SLIMQDDP True H1975_Epitope_Rep2 917.41643335701 917.41532993586 52.137 2 -0.7130678651003539 0.2191616046189932 1.0 ['ENSG00000144407|ENST00000272847|PTH2R'] 41046 8483 HTLFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep3 1218.5703085088896 1218.56920993586 37.615 2 -0.7131313866568776 0.219170049616599 1.0 ['CON__P02769'] 133284 18706 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 78.774 2 -0.7131389636422286 0.219170049616599 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 129389 17470 VRELRGLG True NCI_RA007_Epitope_Rep2 898.5348491272598 898.53374993586 72.688 2 -0.713178353515203 0.21918178947843214 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 23364 22223 EVRNLRGI True PC9_epitope_Rep1 955.5563128478299 955.55520993586 90.304 2 -0.7132087499991538 0.21919023348819028 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9'] 136536 18870 WWDIYYTLFEK True PC9_epitope_Rep6 1562.7445671099797 1562.74346993586 85.232 2 -0.7132102187725216 0.21919023348819028 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 60913 6599 LIAAQEFDP True NCI_RA007_Epitope_Rep2 1002.5022115863 1002.50110993586 30.277 2 -0.7132532475697434 0.21927714466127432 1.0 ['ENSG00000148386|ENST00000619315|LCN9', 'nc|ENSG00000148386|Q8WX39|LCN9'] 133285 18976 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 79.832 2 -0.7133187277948264 0.21930061939984366 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 116446 5884 TTKTPRDKER True NCI_RA007_Epitope_Rep2 1230.6680481247797 1230.6669499358602 27.507 2 -0.7133252683862418 0.21930061939984366 1.0 ['ENSG00000113141|ENST00000417647|IK'] 13149 15442 DLRISINTFC True H1975_Epitope_Rep2 1180.59104367404 1180.5899499358602 64.554 2 -0.7134177801468975 0.21933912625154095 1.0 ['GUCY1A2|p.L493Ffs*10|1|0.08|ENSG00000152402|chr11:106810208-106810208|G/-|frameshift_variant', 'ENSG00000152402|ENST00000526355|GUCY1A2', 'nc|ENSG00000152402|P33402-3|GUCY1A2', 'nc|ENSG00000152402|P33402-2|GUCY1A2'] 98650 10808 SGAPAPLTGL True PC9_epitope_Rep4 882.4810822189 882.47998993586 49.331 2 -0.7134391081777903 0.21933912625154095 1.0 ['nc|ENSG00000179111|Q9BYE0|HES7', 'ENSG00000179111|ENST00000541682|HES7'] 133286 19158 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 80.562 2 -0.7134427616619309 0.2193508621596837 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 98460 5006 SFGWSTNLNEY True H1975_Epitope_Rep3 1316.567331024 1316.56622993586 24.381 2 -0.7134614014463502 0.21939266386049308 1.0 ['nc|ENSG00000182903|Q8TF20|ZNF721', 'ENSG00000182903|ENST00000511833|ZNF721'] 17943 12846 EIATLKDNDP True NCI_RA007_Epitope_Rep1 1114.5506183307 1114.5495299358602 53.958 2 -0.7135177266943065 0.21940439861096495 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1', 'ENST00000483120.1_1_1:15684662-15690294:+|nuORF'] 46498 6081 ISVQWQWIWDR True PC9_epitope_Rep1 1515.7622828627898 1515.76063490379 28.205 3 -0.7135449795821509 0.2194278670535003 1.0 ['ENST00000453184.2_1_2:90007722-90008108:+|nuORF'] 47295 6161 IVDPRECVK True NCI_RA007_Epitope_Rep2 1057.5590152697698 1057.5579099358602 28.573 2 -0.7135491733049864 0.2194278670535003 1.0 ['EIF4ENIF1|p.R104C|1|0.1|ENSG00000184708|chr22:31463956-31463956|G/A|missense_variant'] 780 13782 AAVTLRLEFP True PC9_epitope_Rep6 1115.6338944621898 1115.63278993586 64.813 2 -0.7135702160619841 0.21943960074559557 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 91880 24112 RKKRKKLKKR True NCI_RA007_Epitope_Rep1 1367.9677398156298 1367.96608490379 99.876 3 -0.7135934284459032 0.21945133408493048 1.0 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B'] 28337 6062 FRSATTSGAPG True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 28.131 2 -0.7136266865943076 0.21947809878844363 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 123677 14442 VGQTYSSV True PC9_epitope_Rep1 839.4024975450299 839.40194496793 60.375 1 -0.7136524779339237 0.21948653198653198 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.A795Dfs*17|1|0.15|ENSG00000154358|chr1:228217019-228217038|CGCGCTTTCTGCACAAGGAC/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 12052 17554 DHSRWSWRRKR True NCI_RA007_Epitope_Rep3 1568.8185093826398 1568.81740993586 77.012 2 -0.7136672989977739 0.21948653198653198 1.0 ['ENST00000496846.1_1_7:30411132-30411270:+|nuORF'] 129394 17334 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 73.449 2 -0.7136709773974967 0.21949496467758906 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 135507 962 WKERILKAK True NCI_RA007_Epitope_Rep1 1170.7237125260997 1170.7220549037902 5.0929 3 -0.7136915041817123 0.21949496467758906 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 33799 21402 GLLKISWEKPV True PC9_epitope_Rep3 1268.7492585676 1268.74816993586 87.619 2 -0.7137563083610755 0.21950852934545728 1.0 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR'] 76387 6656 NQCLSAIAS True H1975_Epitope_Rep3 905.4276667470499 905.42656993586 30.554 2 -0.7137567452084662 0.21950852934545728 1.0 ['ENSG00000108510|ENST00000397786|MED13'] 6452 16939 APSFAPSSSV True PC9_epitope_Rep1 948.45526139388 948.45416993586 69.979 2 -0.7137648557195592 0.21950852934545728 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 106875 14591 SVDDTIVAL True NCI_RA007_Epitope_Rep2 931.4862271689899 931.4856749679301 61.42 1 -0.7137768906303982 0.21950852934545728 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 82261 10848 PPFTDCGSIFI True H1975_Epitope_Rep3 1195.5583465634297 1195.55671490379 46.808 3 -0.713802318317956 0.21950852934545728 1.0 ['ENST00000466767.1_1_1:160518048-160520985:-|nuORF'] 126945 21818 VLRGSRHP True H1975_Epitope_Rep3 920.5304324531598 920.52932993586 91.217 2 -0.7138303522879644 0.21953528916676687 1.0 ['ENSG00000187720|ENST00000261862|THSD4', 'nc|ENSG00000187720|Q6ZMP0-2|THSD4'] 33066 18116 GILSVDLL True PC9_epitope_Rep2 828.49566965388 828.49456993586 74.985 2 -0.7138639840095672 0.21955874838438186 1.0 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'DIO2|p.R209Efs*?|1|0.41|ENSG00000211448|chr14:80202886-80202886|G/-|frameshift_variant', 'ENST00000438257.8_2_14:80669457-80677836:-|nuORF'] 39192 19356 HIFVNFHLP True PC9_epitope_Rep6 1122.59744938382 1122.5963499358602 87.101 2 -0.7138674125025106 0.21955874838438186 1.0 ['SLC34A2|p.R578Qfs*24|1|0.3|ENSG00000157765|chr4:25676408-25676409|-/AA|frameshift_variant', 'nc|ENSG00000157765|O95436-2|SLC34A2', 'chr4:25648356-25662498|444|35.08|0.51|6.1|+|ENST00000645788|SLC34A2,SLC34A2', 'ENSG00000157765|ENST00000382051|SLC34A2'] 72874 21017 MPRGVLRRP True H1975_Epitope_Rep3 1080.63385197588 1080.6327499358601 87.782 2 -0.7139048891949888 0.21958220619176436 1.0 ['ENST00000245960.9_1_20:3776620-3776671:+|nuORF'] 34551 12343 GPSLSIPTEQL True H1975_Epitope_Rep2 1140.60265390356 1140.60154993586 52.562 2 -0.7139112782505079 0.21958220619176436 1.0 ['ENST00000264025.7_1_11:119533025-119533118:-|nuORF'] 45979 5984 ISESPSSPA True H1975_Epitope_Rep3 873.40797684829 873.4074249679301 28.029 1 -0.7139429423158005 0.21959393456665816 1.0 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-3|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 113533 5401 TLTNNLLT True H1975_Epitope_Rep2 888.4916469026 888.49054993586 25.807 2 -0.7139711232451982 0.21960566258904152 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 103439 4794 SPPRRARHGS True H1975_Epitope_Rep3 1119.6009716244698 1119.5998699358602 23.568 2 -0.7140292053653969 0.21961408992546286 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 99171 12344 SHIGQYNCS True PC9_epitope_Rep4 1007.4130793120702 1007.41257496793 55.29 1 -0.7140654196748163 0.21961408992546286 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 17197 8009 EGSYRCECPP True H1975_Epitope_Rep2 1139.43757980775 1139.4364899358602 35.754 2 -0.7141821780774126 0.21967089939138928 1.0 ['ENSG00000166147|ENST00000316623|FBN1'] 57636 5768 LEEEFYSLVR True H1975_Epitope_Rep2 1283.63976768827 1283.63812490379 27.181 3 -0.7142199210939099 0.21970937833410972 1.0 ['ENSG00000102221|ENST00000614628|JADE3'] 105483 2562 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 14.525 3 -0.7142282713357864 0.21970937833410972 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 83545 13404 PTVQGFQW True PC9_epitope_Rep5 961.4657665079299 961.46466993586 56.575 2 -0.7142814270152157 0.21976618380717677 1.0 ['nc|ENSG00000142794|Q9H094-3|NBPF3', 'ENSG00000142794|ENST00000318249|NBPF3', 'nc|ENSG00000142794|Q9H094-5|NBPF3', 'ENST00000430580.6_1_1:16935030-16935177:-|nuORF', 'ENST00000485941.2_1_1:21771537-21772570:+|nuORF', 'ENST00000478653.6_1_1:21771537-21779909:+|nuORF', 'ENST00000429694.1_1:144598537-144604418:+|nuORF', 'ENST00000423405.1_1:144598537-144606397:+|nuORF', 'ENST00000449960.1_1:144598537-144615173:+|nuORF', 'ENST00000421407.1_1:144598537-144606923:+|nuORF', 'ENST00000447534.1_1:144598537-144599905:+|nuORF'] 40606 11449 HRIPEPEAAVL True PC9_epitope_Rep4 1230.67207087606 1230.67096993586 51.807 2 -0.7143150317685178 0.21977790800763347 1.0 ['ENSG00000101255|ENST00000217233|TRIB3'] 26571 7642 FIKQLGGG True NCI_RA007_Epitope_Rep3 818.4650382319398 818.46394993586 37.186 2 -0.7144170943212286 0.21978963185574757 1.0 ['SAMHD1|p.Y146F|1|0.17|ENSG00000101347|chr20:36935101-36935101|T/A|missense_variant'] 42520 16173 IEENRYLF True PC9_epitope_Rep4 1082.53965972418 1082.53856993586 70.153 2 -0.7145757466615855 0.21983140749199861 1.0 ['ENSG00000153066|ENST00000283033|TXNDC11', 'nc|ENSG00000153066|Q6PKC3|TXNDC11', 'ENST00000572732.1_1_16:11785059-11785929:-|nuORF'] 71492 12291 LYWVELYLMQI True H1975_Epitope_Rep1 1469.76286002641 1469.76176993586 52.302 2 -0.7146095409205373 0.21984313018391632 1.0 ['ENST00000471694.1_1_3:107764569-107764836:-|nuORF'] 42450 11079 IEDYDVIAS True PC9_epitope_Rep3 1023.4760564081099 1023.4749499358601 47.614 2 -0.7146148276394485 0.21984824581173465 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 39601 8665 HLKSKVPA True H1975_Epitope_Rep2 878.5337864981 878.53268993586 38.289 2 -0.7146379164189266 0.21984824581173465 1.0 ['ENST00000460566.5_1_22:28293057-28315179:-|nuORF', 'ENSG00000180957|ENST00000335272|PITPNB', 'nc|ENSG00000180957|P48739-2|PITPNB', 'nc|ENSG00000180957|P48739-3|PITPNB'] 18195 19721 EILQFWFQTI True PC9_epitope_Rep5 1323.6863239578697 1323.6852299358602 80.901 2 -0.7146405213290346 0.21984824581173465 1.0 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|93|2|anti-sense'] 102404 19210 SLTLERWYVAP True PC9_epitope_Rep3 1333.7030366511701 1333.70192993586 79.11 2 -0.7146617231771233 0.21985996754612658 1.0 ['ENSG00000136881|ENST00000259407|BAAT'] 125972 10680 VLDMLFFLNQK True NCI_RA007_Epitope_Rep2 1366.7318942513 1366.73078993586 46.143 2 -0.7147063032964124 0.2198867136439443 1.0 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 123798 15327 VGRLKHERV True NCI_RA007_Epitope_Rep3 1092.651610215 1092.65050993586 67.845 2 -0.7148666366482547 0.21997025195691042 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 129390 17654 VRELRGLG True NCI_RA007_Epitope_Rep2 898.5348491272598 898.53374993586 73.409 2 -0.7148704630883501 0.21997025195691042 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 73858 11665 NAQFKSLV True PC9_epitope_Rep2 905.4970666362099 905.49596993586 50.2 2 -0.7149145786161449 0.22000540849133138 1.0 ['nc|ENSG00000213619|O75489-2|NDUFS3', 'ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'ENSG00000213619|ENST00000263774|NDUFS3'] 97622 4928 SEFFEWQKKMQ True H1975_Epitope_Rep2 1486.6914859912997 1486.68985490379 24.038 3 -0.7149229162582146 0.22000540849133138 1.0 ['ENSG00000206113|ENST00000635017|CFAP99'] 68540 12909 LTGIWQMRHLK True H1975_Epitope_Rep1 1381.7652600682502 1381.76416993586 54.728 2 -0.714993819756734 0.22000540849133138 1.0 ['nc|ENSG00000158604|Q7Z7H5-2|TMED4', 'ENSG00000158604|ENST00000457408|TMED4'] 75863 5417 NLQEVRHWLEK True NCI_RA007_Epitope_Rep2 1450.7680965192196 1450.76644490379 25.69 3 -0.7150107404903743 0.2200171266319126 1.0 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'ENST00000422005.7_2_14:80669058-80669397:-|nuORF'] 34309 6856 GPALSPRD True NCI_RA007_Epitope_Rep5 811.41881631551 811.41770993586 33.055 2 -0.7150347728093617 0.22001742474313526 1.0 ['ENST00000300181.6_2_7:100075638-100075929:-|nuORF'] 477 8458 AAMERQLI True NCI_RA007_Epitope_Rep5 930.4956867372198 930.49458993586 39.215 2 -0.7150401235826314 0.22001742474313526 1.0 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 95539 11668 RWRRQEEQEDY True NCI_RA007_Epitope_Rep1 1593.7284165352098 1593.7273099358601 49.359 2 -0.7151173840157286 0.22001742474313526 1.0 ['ENST00000505073.5_1_4:91048743-91048815:+|nuORF'] 13678 6135 DPRQAPMSWMP True H1975_Epitope_Rep2 1314.58491274778 1314.58380993586 28.575 2 -0.7151431523875803 0.22001742474313526 1.0 ['nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 103659 21316 SPVDLYILM True PC9_epitope_Rep5 1049.54671925057 1049.54562993586 87.046 2 -0.7151586126927465 0.22001742474313526 1.0 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 82530 23365 PPRRGGVLLG True PC9_epitope_Rep6 1020.6192474575597 1020.61867496793 102.98 1 -0.7151649368934413 0.22001742474313526 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 89378 14047 QWVHFRQAL True PC9_epitope_Rep1 1183.62506111399 1183.62340490379 58.869 3 -0.7151650310994052 0.22001742474313526 1.0 ['ENST00000278968.10_3_11:117070126-117070369:+|nuORF'] 131972 8701 VTSEGAGL True H1975_Epitope_Rep3 732.3653837603199 732.36483496793 38.467 1 -0.7151778800778736 0.22001742474313526 1.0 ['ENSG00000171298|ENST00000302262|GAA'] 110172 4182 TEPQDRVPP True H1975_Epitope_Rep2 1037.5141732523298 1037.5130699358601 21.194 2 -0.7152073933704681 0.22001742474313526 1.0 ['nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 29287 21868 FVAWMHFL True PC9_epitope_Rep2 1049.51569390581 1049.5145899358602 89.591 2 -0.7152428832679939 0.2200408567909394 1.0 ['ENSG00000148344|ENST00000340607|PTGES'] 32385 12209 GFMPVFVL True PC9_epitope_Rep6 908.4829967951999 908.48188993586 58.327 2 -0.7153153643609967 0.2200408567909394 1.0 ['CLCN1|p.G594Wfs*13|1|0.47|ENSG00000188037|chr7:143342123-143342124|-/T|frameshift_variant', 'CLCN1|p.A899Vfs*13|1|0.14|ENSG00000188037|chr7:143351693-143351694|-/T|frameshift_variant', 'ENSG00000188037|ENST00000343257|CLCN1', 'CLCN1|p.G482R|1|0.19|ENSG00000188037|chr7:143339295-143339295|G/A|missense_variant'] 108782 7185 SYSYYECLGT True H1975_Epitope_Rep2 1184.46959112868 1184.4684899358601 32.571 2 -0.7153695339640506 0.2201093487142514 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|192|3|sense'] 82519 24834 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 103.01 1 -0.7153721143310089 0.2201093487142514 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 76995 21008 NRGLIRRPK True PC9_epitope_Rep6 1108.69414373332 1108.69304993586 93.632 2 -0.7153861308542665 0.220122857872366 1.0 ['ENST00000396757.5_1_9:35615990-35616170:-|nuORF'] 16827 8853 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 41.584 3 -0.7154005557976449 0.220122857872366 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 66721 20161 LSLGPLFI True H1975_Epitope_Rep2 858.5214904789 858.5209449679301 83.545 1 -0.7154044505526668 0.220122857872366 1.0 ['ENST00000483551.6_1_15:69084176-69084248:-|nuORF'] 61517 7769 LKERLTKI True H1975_Epitope_Rep2 999.6440652230699 999.64296993586 34.831 2 -0.7154080204530345 0.220122857872366 1.0 ['ENSG00000154359|ENST00000398246|LONRF1', 'nc|ENSG00000154359|Q17RB8-2|LONRF1'] 83125 8416 PSQELGSQPV True PC9_epitope_Rep4 1040.5138388991597 1040.51274993586 39.836 2 -0.7154118196867745 0.220122857872366 1.0 ['ENSG00000176058|ENST00000409012|TPRN', 'nc|ENSG00000176058|Q4KMQ1-2|TPRN', 'nc|ENSG00000176058|Q4KMQ1-4|TPRN', 'nc|ENSG00000176058|Q4KMQ1-3|TPRN'] 25148 3703 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 20.318 2 -0.7154663399071095 0.22014958997927367 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 82525 25548 PPRRGGVLLG True PC9_epitope_Rep3 1020.6192474575597 1020.61867496793 103.75 1 -0.7155610647351268 0.22017632128321044 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 24980 4213 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 21.323 2 -0.7155917562964571 0.22019974468724188 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 71577 5003 MCNKRSCPVD True H1975_Epitope_Rep3 1151.48856983479 1151.4874699358602 24.371 2 -0.7156049429857483 0.22019974468724188 1.0 ['ENSG00000186340|ENST00000617924|THBS2', 'THBS2|p.C896Vfs*105|1|0.3|ENSG00000186340|chr6:169225233-169225233|G/-|frameshift_variant', 'THBS2|p.Q541H|1|0.13|ENSG00000186340|chr6:169234762-169234762|C/G|missense_variant'] 20987 13880 EQQYRALRKYY True PC9_epitope_Rep5 1516.7786612029197 1516.7775699358601 58.409 2 -0.7156144216224417 0.22021145586159252 1.0 ['nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4', 'ENST00000484594.5_1_2:212426591-213403254:-|nuORF', 'ENST00000459774.1_1_2:212989446-212989798:-|nuORF'] 57353 13061 LEAGKWKSI True PC9_epitope_Rep2 1030.5811306133398 1030.58002993586 55.517 2 -0.7156299600857644 0.22021985943413228 1.0 ['nc|ENSG00000173077|Q9P2X7|DELEC1'] 16828 8947 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 41.958 3 -0.7156305971301011 0.22021985943413228 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 133330 18570 VVVARALRGRG True NCI_RA007_Epitope_Rep4 1152.7203584811598 1152.7187249037902 80.338 3 -0.715651489319935 0.22024658727417443 1.0 ['ENSG00000243477|ENST00000443094|NAA80', 'nc|ENSG00000243477|Q93015-2|NAA80'] 67692 19249 LSWKQQVL True PC9_epitope_Rep1 1000.5705659296399 1000.56946993586 78.841 2 -0.715714236454759 0.22031174915905816 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B', 'ENST00000595476.1_1_19:39869154-39871842:+|nuORF'] 122769 17820 VGGNFEIL True PC9_epitope_Rep5 847.4439684341899 847.44286993586 73.563 2 -0.7157203673386888 0.22031174915905816 1.0 ['ENSG00000179941|ENST00000650064|BBS10'] 73860 11054 NAQFKSLV True PC9_epitope_Rep4 905.4970666362099 905.49596993586 50.294 2 -0.7157509608430794 0.22031174915905816 1.0 ['nc|ENSG00000213619|O75489-2|NDUFS3', 'ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'ENSG00000213619|ENST00000263774|NDUFS3'] 18235 7103 EIPATEPPQLP True H1975_Epitope_Rep3 1190.6183039676998 1190.61720993586 32.291 2 -0.7157955101893088 0.22033516533020994 1.0 ['ENSG00000260314|ENST00000569591|MRC1'] 38038 5546 HASDDFFRKLR True NCI_RA007_Epitope_Rep2 1390.7105816430999 1390.7094899358601 26.189 2 -0.7158021660086644 0.22033516533020994 1.0 ['ENST00000566590.5_1_16:8807641-8875284:+|nuORF', 'ENSG00000183044|ENST00000268251|ABAT'] 36336 5980 GVEPPDRIR True NCI_RA007_Epitope_Rep5 1037.5617921510898 1037.5606899358602 29.685 2 -0.715823904426959 0.22034025556706757 1.0 ['nc|ENSG00000163576|Q8N7U6-3|EFHB', 'ENSG00000163576|ENST00000295824|EFHB', 'nc|ENSG00000163576|Q8N7U6-2|EFHB', 'ENST00000498089.1_1_3:19936277-19975510:-|nuORF'] 67043 11574 LSPTIPRQ True PC9_epitope_Rep1 910.5236157372199 910.52250993586 49.398 2 -0.7158248802101513 0.22034025556706757 1.0 ['ENSG00000196453|ENST00000247930|ZNF777'] 769 10983 AAVQLRYL True H1975_Epitope_Rep3 932.5443511818 932.54324993586 47.335 2 -0.7158285895324129 0.22034025556706757 1.0 ['ENSG00000116218|ENST00000367615|NPHS2', 'nc|ENSG00000116218|Q9NP85-2|NPHS2'] 109219 5092 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 24.44 2 -0.7158919659724673 0.22035043466510518 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 83874 17935 PVPEYIKGF True PC9_epitope_Rep1 1048.5593325395998 1048.55822993586 73.778 2 -0.7159049871832998 0.22035043466510518 1.0 ['ENSG00000278053|ENST00000617633|DDX52', 'DDX52|p.G535V|1|0.61|ENSG00000278053|chr17:37619813-37619813|C/A|missense_variant'] 3190 5884 AGEEPPAQPP True H1975_Epitope_Rep3 991.4610750503098 991.45996993586 27.642 2 -0.7159214589687409 0.22035043466510518 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 57407 8362 LEARGEALGL True H1975_Epitope_Rep3 1027.5662088251897 1027.5651099358602 37.147 2 -0.715924987643194 0.22035043466510518 1.0 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|109|12.93|0.02|9.51|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3', 'chrX:152751822-152752394|112|20.12|0.06|8.5|-|ENST00000623806|MAGEA2,MAGEA2', 'ENSG00000183305|ENST00000682532|MAGEA2B', 'chrX:152752513-152753313|115|31.17|0.07|8.89|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751428-152751509|133|65.11|0.18|8.5|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152751725|116|29.16|0.07|8.73|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152752394|126|53.4|0.12|8.82|-|ENST00000623438|MAGEA2,MAGEA2', 'ENSG00000268606|ENST00000684311|MAGEA2', 'chrX:152752513-152753788|112|27.71|0.06|8.91|-|ENST00000620710|MAGEA2,MAGEA2', 'chrX:152716745-152716896|116|29.12|0.07|8.72|+|ENST00000447530|MAGEA2B,MAGEA2B', 'chrX:152714682-152715079|111|18.5|0.03|9.17|+|ENST00000447530|MAGEA2B,MAGEA2B'] 73760 8599 NAEVVAGTGEQ True PC9_epitope_Rep2 1073.4989171110099 1073.4978299358602 38.437 2 -0.7159259527881051 0.22035043466510518 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 128872 8745 VQDWYHFHYVD True NCI_RA007_Epitope_Rep1 1507.65206370747 1507.65096993586 38.018 2 -0.7159509611241301 0.22035043466510518 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D', 'SCNN1D|p.C421Pfs*60|1|0.11|ENSG00000162572|chr1:1290360-1290370|CTGCAGCTCTG/-|frameshift_variant'] 44558 5663 ILNSFEHEFLS True H1975_Epitope_Rep3 1334.65066672514 1334.6495699358602 26.812 2 -0.7159989349362904 0.2203921686385202 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 111735 11395 TIHEEQYY True H1975_Epitope_Rep2 1081.47163973401 1081.4705499358602 48.88 2 -0.7160469334884769 0.22041226898073776 1.0 ['ENST00000513178.1_1_4:47954638-48018683:-|nuORF'] 82522 25124 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 104.14 1 -0.7160671589985899 0.22041226898073776 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 127992 8752 VPHRLCAP True PC9_epitope_Rep3 891.4748917229899 891.4737899358599 38.618 2 -0.7160810493751466 0.22041226898073776 1.0 ['ENST00000216799.8_1_14:24608772-24610662:-|nuORF', 'ENST00000419198.6_1_14:24608772-24610646:-|nuORF'] 5990 5738 APIFC[Carbamidomethyl]C[Carbamidomethyl]TLP True H1975_Epitope_Rep3 1077.49872407119 1077.49762993586 27.1 2 -0.716120896637795 0.2204173547515388 1.0 ['ENST00000379644.8_2_8:43046729-43048925:+|nuORF'] 15734 15778 ECDDCDSC True PC9_epitope_Rep3 888.1935696015601 888.19246993586 65.847 2 -0.7161390026343063 0.2204173547515388 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 85470 16825 QFIRHWRQWNR True H1975_Epitope_Rep1 1625.8439958544898 1625.84288993586 70.127 2 -0.7161445710041942 0.2204173547515388 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 8199 16130 ATFPDKEP True PC9_epitope_Rep1 903.4337976733099 903.43270993586 66.86 2 -0.716192568474805 0.22042905826365014 1.0 ['ENSG00000224470|ENST00000427980|ATXN1L'] 44628 10204 ILRQRYFSERE True H1975_Epitope_Rep1 1495.78956023979 1495.78792490379 44.19 3 -0.716224024769204 0.22043745214897992 1.0 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2'] 60091 18705 LGLRHRSRRP True PC9_epitope_Rep2 1246.7483045645 1246.7472099358602 77.321 2 -0.7162316770817597 0.22043745214897992 1.0 ['ENST00000368069.7_1_1:160312956-160313031:-|nuORF'] 123869 16022 VGRRAAKA True NCI_RA007_Epitope_Rep5 827.5089687325898 827.5084249679301 68.354 1 -0.7162929429191318 0.22046085716430233 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 94473 11800 RRRRRPKRR True NCI_RA007_Epitope_Rep2 1335.8660687117497 1335.86443490379 50.499 3 -0.7163063347422868 0.22046085716430233 1.0 ['ENST00000560168.1_1_19:46269581-46272089:-|nuORF'] 62356 16088 LLGLKKLSFYY True NCI_RA007_Epitope_Rep5 1343.78530972315 1343.7842099358602 68.613 2 -0.7163608129347455 0.22048426077427682 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 63052 13227 LLQENLEKLK True NCI_RA007_Epitope_Rep1 1226.72343774258 1226.7223499358602 55.448 2 -0.7163688780923452 0.22048426077427682 1.0 ['ENSG00000134516|ENST00000520908|DOCK2', 'DOCK2|p.D929Ifs*4|1|0.19|ENSG00000134516|chr5:169840836-169840836|G/-|frameshift_variant'] 59411 10086 LFLRNHNF True NCI_RA007_Epitope_Rep4 1059.56139822827 1059.56030993586 45.645 2 -0.7163823759601444 0.22049596205229818 1.0 ['nc|ENSG00000064886|Q15782-5|CHI3L2', 'nc|ENSG00000064886|Q15782-6|CHI3L2', 'ENSG00000064886|ENST00000369748|CHI3L2'] 109225 5632 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 26.663 2 -0.7164123366578988 0.22051936355448815 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 44554 23737 ILNPINIVVV True PC9_epitope_Rep3 1092.69068106232 1092.68958993586 96.59 2 -0.716422490088384 0.22051936355448815 1.0 ['ENSG00000166106|ENST00000299164|ADAMTS15'] 64205 23788 LPGLFLLQQL True PC9_epitope_Rep3 1140.69068106232 1140.6890249037901 96.784 3 -0.7165083294145667 0.22059949266769735 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'ENST00000580882.5_1_17:26966325-26972074:-|nuORF', 'ENST00000579253.1_1_17:26967576-26969063:-|nuORF', 'nc|ENSG00000007202|Q14667-4|BLTP2', 'ENST00000577417.5_1_17:26966838-26970337:-|nuORF'] 99554 9007 SIEEALMYSFQ True H1975_Epitope_Rep1 1316.5958542709598 1316.5947499358601 39.549 2 -0.7165174954675408 0.22059949266769735 1.0 ['ENSG00000172840|ENST00000311765|PDP2', 'PDP2|p.L450Sfs*25|1|0.44|ENSG00000172840|chr16:66885628-66885628|G/-|frameshift_variant'] 105809 3074 SSIRHMIRK True NCI_RA007_Epitope_Rep4 1126.63933127914 1126.6376849037902 17.205 3 -0.7165865477172046 0.22059949266769735 1.0 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28'] 132399 21896 VVAGRRKS True PC9_epitope_Rep3 871.53518348043 871.53408993586 89.527 2 -0.7166145059290284 0.22064628453930088 1.0 ['ENSG00000151952|ENST00000422113|TMEM132D'] 25072 2995 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 16.213 2 -0.7166175498040274 0.22064628453930088 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 109226 5727 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 27.021 2 -0.7166325366499289 0.22064628453930088 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 136251 11541 WRWQLEEERKR True H1975_Epitope_Rep1 1614.8379074145398 1614.8368099358602 49.376 2 -0.7166569299909624 0.22064628453930088 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 69470 15019 LVAFALANAL True PC9_epitope_Rep4 1001.5909670210499 1001.58986993586 65.707 2 -0.7167138661179424 0.22064804670498717 1.0 ['nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 21458 13728 ERKYREWYEKY True NCI_RA007_Epitope_Rep2 1648.7997905703196 1648.79868993586 58.045 2 -0.7167192591985303 0.22064804670498717 1.0 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 122558 10113 VGFAEAAR True PC9_epitope_Rep1 819.4239016959499 819.42280993586 43.771 2 -0.7167315572669041 0.22064804670498717 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 135904 4644 WPRCWWPCWRR True NCI_RA007_Epitope_Rep4 1630.7550468210598 1630.7533949037902 24.28 3 -0.7167444200094439 0.22064804670498717 1.0 ['ENST00000534167.5_1_8:145168880-145169283:+|nuORF'] 109544 6934 TDRRYNNGTWY True PC9_epitope_Rep2 1444.6483753093598 1444.64671490379 32.073 3 -0.7167676890095025 0.22065643149790645 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000488064.5_1_18:6961676-6965410:-|nuORF', 'ENST00000490190.1_1_18:6964066-6965410:-|nuORF'] 135512 1346 WKERILKAK True PC9_epitope_Rep3 1170.7237125260997 1170.7220549037902 7.4319 3 -0.7167695221579651 0.22065643149790645 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 131325 9813 VTGLEKGNKY True H1975_Epitope_Rep1 1107.59242357303 1107.5913299358601 42.673 2 -0.716798495368697 0.22070983717265702 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 70374 8241 LVTAQRPPDP True H1975_Epitope_Rep2 1092.5927579262 1092.5916699358602 36.652 2 -0.7168110793302368 0.22070983717265702 1.0 ['nc|ENSG00000173039|Q04206-2|RELA'] 110591 12005 TFSHITGL True PC9_epitope_Rep1 874.45486747106 874.45376993586 51.039 2 -0.7168489980295245 0.22072153190467614 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 67837 9470 LTAKEAMEH True PC9_epitope_Rep1 1028.49608066004 1028.49498993586 41.283 2 -0.716906402330813 0.22072660153963894 1.0 ['ENSG00000070770|ENST00000262506|CSNK2A2'] 55860 12005 LAPSEEDE True PC9_epitope_Rep3 888.3712569864 888.37014993586 51.203 2 -0.716915584784428 0.22072660153963894 1.0 ['ENSG00000087263|ENST00000566157|OGFOD1', 'nc|ENSG00000087263|Q8N543-2|OGFOD1'] 131869 12798 VTRGFRDL True PC9_epitope_Rep2 962.5297637468199 962.52866993586 54.528 2 -0.7169167771113565 0.22072660153963894 1.0 ['ENSG00000178814|ENST00000618853|OPLAH'] 140464 1009 YRHRRKYF True PC9_epitope_Rep5 1224.6628436050398 1224.6617499358601 5.5972 2 -0.7169286188091877 0.22073829531812725 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 8699 7834 AVANRSKKSRA True NCI_RA007_Epitope_Rep1 1186.6894522757 1186.68834993586 34.463 2 -0.7169976598326259 0.22079169292638276 1.0 ['ENSG00000181104|ENST00000319211|F2R'] 42611 9556 IEGPLCPVGP True NCI_RA007_Epitope_Rep2 980.50010341132 980.49900993586 41.784 2 -0.7170178724723048 0.22079169292638276 1.0 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 129987 19210 VRVVGGGG True H1975_Epitope_Rep2 699.4027723285499 699.40222496793 79.732 1 -0.717075659928752 0.22081839052863766 1.0 ['ENSG00000253352|ENST00000644773|TUG1'] 15737 14268 ECDDCDSC True PC9_epitope_Rep6 888.1935696015601 888.19246993586 66.773 2 -0.7171472413837833 0.2208485866890716 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 123758 17466 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 73.969 1 -0.7171636834892008 0.2208485866890716 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 47181 16916 ITYKNNVGGL True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 70.312 2 -0.7171700313410254 0.2208485866890716 1.0 ['EYA2|p.N392I|1|0.24|ENSG00000064655|chr20:47172844-47172844|A/T|missense_variant'] 89656 10891 QYTSQGGVT True NCI_RA007_Epitope_Rep1 939.4297749220298 939.42922496793 46.355 1 -0.717190698454346 0.2208485866890716 1.0 ['ENSG00000010379|ENST00000343164|SLC6A13'] 39701 9068 HLSQKYKRIK True NCI_RA007_Epitope_Rep2 1299.77753900411 1299.77590490379 39.876 3 -0.7172235689837189 0.2208485866890716 1.0 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF', 'ENST00000415279.1_1_1:106435599-106436040:+|nuORF'] 78780 5778 PAAPAVSQA True PC9_epitope_Rep4 810.4235673427801 810.42246993586 29.079 2 -0.7172370123642464 0.2208485866890716 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 138095 6650 YGGLRGAI True PC9_epitope_Rep2 805.4446371405298 805.44354993586 30.987 2 -0.7172384834484631 0.2208485866890716 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 119801 7018 VCRMETEYGP True NCI_RA007_Epitope_Rep3 1183.50018006431 1183.4990899358602 34.721 2 -0.7172407267122858 0.2208485866890716 1.0 ['ENSG00000101825|ENST00000217939|MXRA5'] 67833 11220 LTAIPFWYHM True PC9_epitope_Rep3 1277.62670090677 1277.6256099358602 48.166 2 -0.7172529280876931 0.2208485866890716 1.0 ['nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 94448 21025 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 87.026 2 -0.7172811946855381 0.22087196567347797 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 65541 5127 LRRIRQRSNSD True PC9_epitope_Rep3 1399.7756415111498 1399.77400490379 24.807 3 -0.7173039496881278 0.22087196567347797 1.0 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 141737 6243 YTWRWVWSWEW True PC9_epitope_Rep4 1683.7622828627896 1683.76063490379 31.059 3 -0.7173332817426045 0.22088365463956192 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 112840 15536 TLITEQFVADP True H1975_Epitope_Rep2 1232.6288686514 1232.6277699358602 64.913 2 -0.7174060409430528 0.22095535285645704 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 136519 7895 WWAGRRRRKTR True NCI_RA007_Epitope_Rep1 1527.8759646891099 1527.87430490379 34.702 3 -0.7174585640695881 0.22095709570957095 1.0 ['ENST00000371417.3_1_9:140513107-140513176:-|nuORF'] 102436 13778 SLTRKVRQFRE True NCI_RA007_Epitope_Rep1 1418.81063003754 1418.8095299358602 57.61 2 -0.7174623117354385 0.22095709570957095 1.0 ['nc|ENSG00000169224|Q5JQS6-2|GCSAML', 'ENSG00000169224|ENST00000366488|GCSAML'] 66290 11022 LSFLWVESFY True PC9_epitope_Rep4 1289.6332257558502 1289.63158490379 50.172 3 -0.7175155376862223 0.22095709570957095 1.0 ['ENST00000482528.1_1_2:238434384-238436234:+|nuORF'] 83415 10060 PTLKTTEWSI True PC9_epitope_Rep2 1174.6233893481399 1174.6217549037901 44.025 3 -0.7175695364950506 0.22095709570957095 1.0 ['ENST00000444388.5_1_22:27068741-27068789:+|nuORF'] 128984 11457 VQLCCQRNIP True H1975_Epitope_Rep3 1172.57943344452 1172.5783299358602 49.188 2 -0.7176561871939184 0.2209954696828778 1.0 ['nc|ENSG00000131844|Q9HCC0-2|MCCC2', 'ENSG00000131844|ENST00000340941|MCCC2'] 101437 13220 SLKSAWQTL True PC9_epitope_Rep2 1032.56039516876 1032.55928993586 56.128 2 -0.7176894561775982 0.2209954696828778 1.0 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP'] 34557 14678 GPSRHTRS True NCI_RA007_Epitope_Rep3 896.4576614357201 896.45656993586 65.117 2 -0.7178098831945279 0.22106715869372814 1.0 ['ENST00000439696.2_1_14:69257207-69259821:-|nuORF', 'ENST00000553375.1_1_14:69257207-69262906:-|nuORF'] 13434 4130 DMRRRREEEGK True NCI_RA007_Epitope_Rep2 1460.7266427133998 1460.72500490379 20.703 3 -0.7179561548335035 0.22110552763819097 1.0 ['ENSG00000072415|ENST00000261681|PALS1', 'nc|ENSG00000072415|Q8N3R9-2|PALS1'] 61612 5340 LKLRPRIRPRR True H1975_Epitope_Rep1 1459.9688024447898 1459.96770993586 25.603 2 -0.7180045592754752 0.22110552763819097 1.0 ['ENSG00000270765|ENST00000604641|GAS2L2'] 30392 6073 GAEATNVTGPG True H1975_Epitope_Rep3 972.4512386425998 972.4501499358599 28.372 2 -0.7180400939241811 0.2211438942805286 1.0 ['ENSG00000006047|ENST00000007699|YBX2'] 91916 24484 RKLLMLKKEKL True H1975_Epitope_Rep1 1398.9108616727797 1398.9097699358601 101.48 2 -0.7180515069076773 0.2211438942805286 1.0 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 25175 7008 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 34.203 2 -0.7181306391300771 0.22116725914592988 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 119331 8775 VANVKAPP True H1975_Epitope_Rep3 794.4650382319398 794.46394993586 38.76 2 -0.7181970920826406 0.22116725914592988 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 72150 18126 MFVFKERWFWR True PC9_epitope_Rep4 1630.8231092975398 1630.82200993586 77.786 2 -0.7182117292109931 0.22119062260953037 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 44713 9313 ILVKIFLKKRI True NCI_RA007_Epitope_Rep3 1369.9537124609299 1369.9526099358602 43.734 2 -0.7182331248992652 0.22119062260953037 1.0 ['ENST00000437852.2_1_9:116613102-116613318:-|nuORF'] 31546 8750 GEDVAVKIFSS True H1975_Epitope_Rep1 1150.58700383942 1150.5859099358602 38.587 2 -0.7183258477041837 0.2212139846714562 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C'] 61180 21493 LILDRMLPELK True PC9_epitope_Rep1 1339.7897434805898 1339.7886499358601 87.516 2 -0.7183918799477627 0.2212139846714562 1.0 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS', 'nc|ENSG00000119969|Q9NRZ9-6|HELLS', 'nc|ENSG00000119969|Q9NRZ9-5|HELLS', 'ENST00000464030.1_1_10:96351997-96352234:+|nuORF'] 141126 18629 YSRYHQKYL True PC9_epitope_Rep3 1256.6302060640799 1256.62855490379 76.877 3 -0.718407071697446 0.2212373453318335 1.0 ['ENST00000523024.1_2_8:10340492-10341737:-|nuORF'] 130184 20787 VSEITTFLYYF True H1975_Epitope_Rep2 1381.6805698710898 1381.6794699358602 86.073 2 -0.7184272884293463 0.2212373453318335 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF'] 116967 14934 TVGIQFRRW True PC9_epitope_Rep5 1161.6407111781298 1161.63960993586 62.448 2 -0.7185076699399917 0.22129069994150907 1.0 ['ENST00000393328.6_1_17:47677417-47677549:-|nuORF'] 110509 10242 TFIQKSTLIK True H1975_Epitope_Rep3 1177.70705940245 1177.7059699358601 44.444 2 -0.7185206002116665 0.22129069994150907 1.0 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674', 'ENST00000344302.8_1_X:46332625-46332913:+|nuORF'] 100429 14826 SLAEHHEVL True PC9_epitope_Rep2 1033.51925863277 1033.5181699358602 62.291 2 -0.7186050622609118 0.2213140568994736 1.0 ['ENSG00000151576|ENST00000281273|QTRT2', 'nc|ENSG00000151576|Q9H974-4|QTRT2', 'ENST00000460163.1_1_3:113775820-113785138:+|nuORF', 'ENST00000466870.1_1_3:113784185-113787033:+|nuORF', 'ENST00000466050.5_1_3:113775696-113789591:+|nuORF'] 102222 6552 SLSEEMELEFR True NCI_RA007_Epitope_Rep2 1368.62313164796 1368.62149490379 30.098 3 -0.718627075333979 0.2213140568994736 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'nc|ENSG00000117385|Q32P28-2|P3H1', 'ENST00000495874.5_1_1:43222117-43232675:-|nuORF', 'P3H1|p.K158Nfs*17|1|0.06|ENSG00000117385|chr1:42762466-42762467|AC/-|frameshift_variant', 'ENST00000492956.1_1_1:43227954-43232675:-|nuORF'] 19032 14746 ELFFLFLF True PC9_epitope_Rep4 1074.5790053550197 1074.5779099358601 64.655 2 -0.7186949196421764 0.22134908970936684 1.0 ['ENST00000536503.5_1_12:27181995-27182121:+|nuORF'] 122915 4394 VGHRATAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 24.019 2 -0.718722579019654 0.22134908970936684 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 84618 19023 QDEENKMLL True PC9_epitope_Rep5 1118.52777471114 1118.5266699358601 78.199 2 -0.7187411446040057 0.22134908970936684 1.0 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 45949 8012 ISENVVAS True PC9_epitope_Rep1 817.41814760917 817.41704993586 35.638 2 -0.7187620018109626 0.2213541276149059 1.0 ['ENSG00000104901|ENST00000221498|DKKL1'] 19666 14151 ELREKLCSI True PC9_epitope_Rep5 1089.58523001761 1089.5841299358601 59.442 2 -0.7187759029500196 0.2213541276149059 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 102955 19638 SPELTLQTPN True PC9_epitope_Rep5 1098.55570371114 1098.55460993586 80.592 2 -0.7187969597654562 0.2213541276149059 1.0 ['ENST00000308527.5_1_15:75940343-75940439:+|nuORF'] 99522 11597 SIDQLIHFHNK True H1975_Epitope_Rep1 1350.7044336335 1350.7033299358602 49.597 2 -0.718868960925136 0.22136248444224513 1.0 ['SHROOM3|p.S250I|1|0.29|ENSG00000138771|chr4:76738922-76738922|G/T|missense_variant'] 9511 15714 AVVVEFRDLW True NCI_RA007_Epitope_Rep4 1232.6553581827598 1232.6542699358602 68.244 2 -0.7188762201502436 0.22136248444224513 1.0 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 129392 16629 VRELRGLG True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 73.192 2 -0.7189698148621293 0.2214241801742364 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 59029 12862 LEVPQIQTRWK True H1975_Epitope_Rep3 1396.7826839542001 1396.7815899358602 54.696 2 -0.7189881106367368 0.2214241801742364 1.0 ['GRIK1|p.H130Q|1|0.34|ENSG00000171189|chr21:29689882-29689882|G/T|missense_variant'] 23141 11692 EVKLWRSQN True H1975_Epitope_Rep1 1158.61455599994 1158.6134499358602 49.964 2 -0.7190056451010277 0.2214241801742364 1.0 ['ENST00000380554.4_2_10:5136697-5138638:+|nuORF'] 4745 12503 ALDINFATRKI True H1975_Epitope_Rep1 1260.71902106848 1260.7179299358602 53.134 2 -0.7190065330025747 0.2214241801742364 1.0 ['RBP2|p.D27N|1|0.4|ENSG00000114113|chr3:139462285-139462285|C/T|missense_variant'] 81709 20972 PLNFIGLA True PC9_epitope_Rep3 843.4854393233499 843.48434993586 85.95 2 -0.7190704342618484 0.22144420787477134 1.0 ['ENSG00000168412|ENST00000307161|MTNR1A'] 100419 12586 SLADRDLAL True PC9_epitope_Rep5 972.52400966004 972.52290993586 53.412 2 -0.7190836301764565 0.22144420787477134 1.0 ['ENST00000492581.5_1_22:21067427-21075805:-|nuORF'] 23481 20124 EVTWTKDNINL True H1975_Epitope_Rep3 1331.6721304457099 1331.6710299358601 84.198 2 -0.7191461788863771 0.22144420787477134 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 63947 10566 LNSQLEMERMK True NCI_RA007_Epitope_Rep2 1377.6744560281697 1377.6733499358602 45.696 2 -0.7191578463933073 0.22145588125046856 1.0 ['ENSG00000144747|ENST00000398559|TMF1', 'nc|ENSG00000144747|P82094-2|TMF1'] 57818 6598 LEESQAPLRK True NCI_RA007_Epitope_Rep2 1169.6404363946097 1169.6393299358601 30.273 2 -0.7192487191633027 0.2215275278877294 1.0 ['ENST00000480340.1_1_1:153902104-153902251:-|nuORF'] 126163 8334 VLFHLHNAR True H1975_Epitope_Rep1 1105.61449643029 1105.6133899358601 36.988 2 -0.7192881075165706 0.2215391996641528 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'ENST00000467542.5_1_13:20411687-20425669:-|nuORF'] 46415 19587 ISSPFRYERKM True PC9_epitope_Rep5 1412.7234548259196 1412.7223499358602 80.393 2 -0.7193678500250038 0.2215475494385223 1.0 ['DRD1|p.T343Pfs*3|1|0.43|ENSG00000184845|chr5:175442073-175442073|T/-|frameshift_variant', 'ENSG00000184845|ENST00000393752|DRD1'] 103814 9888 SPWPGHIL True NCI_RA007_Epitope_Rep5 905.47593726881 905.47484993586 44.678 2 -0.7193965375496392 0.2215475494385223 1.0 ['VGLL3|p.N191I|1|0.57|ENSG00000206538|chr3:86968955-86968955|T/A|missense_variant'] 67357 16664 LSSHLPELS True PC9_epitope_Rep5 981.51311062317 981.51200993586 69.103 2 -0.719440618124139 0.2215592203898051 1.0 ['ENST00000358994.8_1_9:131910717-131910795:+|nuORF'] 33260 8728 GKHQHFQEPEV True NCI_RA007_Epitope_Rep1 1334.6367479965002 1334.63509490379 37.951 3 -0.7194834423907266 0.22162753740517527 1.0 ['ENST00000514705.5_1_5:176074565-176079944:+|nuORF', 'nc|ENSG00000048140|Q96FV3-2|TSPAN17', 'nc|ENSG00000048140|Q96FV3-3|TSPAN17', 'nc|ENSG00000048140|Q96FV3|TSPAN17', 'ENSG00000048140|ENST00000508164|TSPAN17'] 59717 8273 LGCVFVVL True PC9_epitope_Rep1 848.4829967951999 848.48188993586 36.655 2 -0.719522460234564 0.22162753740517527 1.0 ['GOLT1B|p.G74C|1|0.69|ENSG00000111711|chr12:21508485-21508485|G/T|missense_variant'] 86541 6810 QLDFFKRWRSY True NCI_RA007_Epitope_Rep2 1544.7888319638 1544.78719490379 31.105 3 -0.7195656313076709 0.22163588390501318 1.0 ['ENSG00000120332|ENST00000239462|TNN', 'TNN|p.W1260*|1|0.16|ENSG00000120332|chr1:175146950-175146950|G/-|frameshift_variant'] 121535 14930 VFATDDGF True PC9_epitope_Rep4 870.3759484440199 870.37484993586 65.368 2 -0.719577827724175 0.22163588390501318 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 58887 10486 LETAMHVKEK True PC9_epitope_Rep2 1184.62234380232 1184.62124993586 45.655 2 -0.7196879163213868 0.22169252679709167 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 108021 18512 SWVSLSCL True PC9_epitope_Rep3 893.43168949833 893.4311449679301 76.425 1 -0.7197615364128647 0.22169754752053727 1.0 ['MUC4|p.P10S|1|0.23|ENSG00000145113|chr3:195811790-195811790|G/A|missense_variant'] 94462 22957 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 94.754 2 -0.7198031391948897 0.22169754752053727 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 24031 12941 EYNLTHLNP True PC9_epitope_Rep5 1099.5298233164701 1099.5287299358602 54.788 2 -0.7198362824481043 0.22169754752053727 1.0 ['LRRN3|p.V577E|1|0.1|ENSG00000173114|chr7:111124502-111124502|T/A|missense_variant'] 55133 8932 LAADPSHP True PC9_epitope_Rep5 806.3922672145 806.39116993586 39.301 2 -0.7198507164410148 0.22170921464869808 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 85520 16672 QGAGSVLF True PC9_epitope_Rep1 777.40210362221 777.40100993586 68.958 2 -0.719872288297198 0.22171423432066195 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 14375 22036 DTAVWQAECL True PC9_epitope_Rep4 1134.5015599632998 1134.4999049037901 92.982 3 -0.71988010829727 0.22171423432066195 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 138873 7349 YKEGFAAALK True NCI_RA007_Epitope_Rep1 1096.5916952970397 1096.5905899358602 32.579 2 -0.7199009798780182 0.22171423432066195 1.0 ['ENST00000610091.1_1:142697815-142699322:-|nuORF'] 135813 18247 WNILCEKI True PC9_epitope_Rep2 1017.5317378927699 1017.53064993586 75.507 2 -0.7199483711957722 0.22171925354118263 1.0 ['ENSG00000144182|ENST00000651691|LIPT1'] 65643 8922 LSAKVVTNA True H1975_Epitope_Rep2 901.5232813840499 901.52218993586 39.28 2 -0.7199532629601961 0.22171925354118263 1.0 ['ENSG00000137776|ENST00000380516|SLTM'] 79613 10071 PDLLGFEEEWQ True H1975_Epitope_Rep3 1361.61394686325 1361.6128499358601 43.777 2 -0.7199672406691594 0.22171925354118263 1.0 ['ENST00000423670.1_1_1:169857987-169863175:-|nuORF'] 123865 15307 VGRRAAKA True NCI_RA007_Epitope_Rep3 827.5089687325898 827.5084249679301 67.767 1 -0.7199717240934942 0.22172427231032105 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 46114 11151 ISILCWYQRL True PC9_epitope_Rep2 1293.69036379249 1293.68872490379 48.219 3 -0.7199759535065218 0.22172427231032105 1.0 ['ENST00000492094.6_2_6:9708077-9769170:-|nuORF'] 124576 7254 VGVRVSCS True H1975_Epitope_Rep3 805.4116227600899 805.41052993586 32.876 2 -0.7199797344193537 0.22172427231032105 1.0 ['ENST00000338244.5_1_20:4835185-4835350:-|nuORF'] 56049 9271 LASTRYPPP True PC9_epitope_Rep6 1000.5341804209199 1000.53308993586 45.815 2 -0.7200012203704607 0.22173593728922797 1.0 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 117701 2628 TVTWHHWGT True NCI_RA007_Epitope_Rep5 1123.51992733911 1123.5188299358601 14.795 2 -0.7200522989181812 0.22176258992805756 1.0 ['ENST00000298295.3_1_10:45472209-45472434:-|nuORF'] 96875 14880 SATISFYCRSR True H1975_Epitope_Rep1 1289.61865540421 1289.61754993586 62.47 2 -0.7200927591814668 0.22177093012799376 1.0 ['ENST00000434425.5_1_13:34404977-34405425:+|nuORF'] 91506 22388 RHVRRLPE True PC9_epitope_Rep4 1061.6206444398897 1061.61954993586 94.349 2 -0.7201002154181123 0.22177093012799376 1.0 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 60738 21984 LHRLGGGGG True PC9_epitope_Rep6 822.4460341228598 822.44548496793 97.483 1 -0.7202020453258143 0.22180760988475776 1.0 ['ENST00000492981.1_1_3:113465783-113465960:-|nuORF'] 119453 19656 VARHLRGLLE True NCI_RA007_Epitope_Rep2 1162.69347502698 1162.69297496793 81.407 1 -0.7202702186013444 0.22180760988475776 1.0 ['ENST00000463846.5_1_1:44459595-44461452:+|nuORF', 'nc|ENSG00000159214|Q8N4L8-2|CCDC24', 'ENSG00000159214|ENST00000372318|CCDC24'] 122881 5202 VGHLRVRRFWS True PC9_epitope_Rep4 1411.79492040375 1411.79326490379 26.711 3 -0.7203332915913877 0.22180760988475776 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 66433 11810 LSGPLFGAYT True PC9_epitope_Rep4 1024.5229470308798 1024.52184993586 53.194 2 -0.7203517967510705 0.22180760988475776 1.0 ['ENSG00000158163|ENST00000327532|DZIP1L', 'nc|ENSG00000158163|Q8IYY4-2|DZIP1L'] 18 18931 AAAAAGLGLGP True PC9_epitope_Rep1 867.4814165720699 867.4808649679301 77.603 1 -0.7203525918547814 0.22180760988475776 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 128530 15985 VPSTRRLG True H1975_Epitope_Rep2 884.5191990631199 884.51810993586 66.685 2 -0.7204141144311154 0.22180760988475776 1.0 ['ENST00000289013.10_2_8:144460887-144461499:+|nuORF'] 12171 12541 DIERLLLR True H1975_Epitope_Rep1 1026.6185787512197 1026.61748993586 53.283 2 -0.7204211851598108 0.22180760988475776 1.0 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 33695 13282 GLGVWAPLEC True PC9_epitope_Rep5 1043.5110024481899 1043.5099099358602 56.099 2 -0.7205020830066209 0.221849243218942 1.0 ['ENST00000530791.5_1_11:65687742-65688356:+|nuORF'] 122617 18103 VGFRWACASWP True PC9_epitope_Rep1 1278.5967977608198 1278.59515490379 74.426 3 -0.7205375923579301 0.22186090422742055 1.0 ['ENST00000441788.6_1_19:3535369-3535978:+|nuORF'] 12469 6492 DIYSMHIFLTE True NCI_RA007_Epitope_Rep1 1367.64313881655 1367.6414849037901 29.271 3 -0.7206719813420105 0.22190253551519512 1.0 ['nc|ENSG00000227345|Q86W56-4|PARG', 'nc|ENSG00000227345|Q86W56-3|PARG', 'nc|ENSG00000227345|Q86W56-2|PARG', 'ENSG00000227345|ENST00000616448|PARG', 'nc|ENSG00000227345|Q86W56-5|PARG'] 57124 12827 LDTEAGRCVP True PC9_epitope_Rep2 1059.5018943164698 1059.5007899358602 54.641 2 -0.7208634381938067 0.22191087002127852 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 12781 5361 DLERIFGLP True H1975_Epitope_Rep2 1058.5760452328998 1058.57494993586 25.665 2 -0.7208678522538722 0.22191087002127852 1.0 ['ENSG00000119943|ENST00000370575|PYROXD2'] 48952 6993 KEELGKNIN True H1975_Epitope_Rep2 1043.56112344475 1043.56002993586 31.822 2 -0.7208807834643745 0.22192252940735746 1.0 ['ENSG00000149428|ENST00000617285|HYOU1', 'nc|ENSG00000149428|Q9Y4L1-2|HYOU1', 'ENST00000543287.5_1_11:118919950-118926831:-|nuORF'] 72920 5790 MPWFFLWHLKK True NCI_RA007_Epitope_Rep5 1531.8162330119496 1531.81459490379 28.958 3 -0.7209165012324494 0.22193418844401822 1.0 ['ENST00000342922.8_1_11:47290950-47291097:+|nuORF'] 13598 5078 DPGKQVAG True H1975_Epitope_Rep1 770.3922672144998 770.39116993586 24.604 2 -0.7210095265120214 0.22199079970630983 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 100287 17807 SKDEGWFL True PC9_epitope_Rep3 980.4603467743199 980.45924993586 73.692 2 -0.7210448809116942 0.22200245737061344 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 129952 25721 VRVGALLL True PC9_epitope_Rep1 839.5592729699499 839.5587249679301 103.98 1 -0.7212374128038989 0.22208903339876235 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 85690 12900 QGVAWTKMTV True PC9_epitope_Rep4 1119.57466533391 1119.5735699358602 57.498 2 -0.721245724077579 0.22209736144199219 1.0 ['CR2|p.P269T|1|0.04|ENSG00000117322|chr1:207469220-207469220|C/A|missense_variant'] 46365 8347 ISRPFRYKRKM True PC9_epitope_Rep3 1480.8449073712798 1480.8432749037902 37.076 3 -0.721249955379534 0.22209736144199219 1.0 ['ENSG00000169676|ENST00000304374|DRD5'] 132857 18982 VVLLRARPVI True PC9_epitope_Rep1 1134.76009803482 1134.7584449037902 77.8 3 -0.7212512232374345 0.2220990336354783 1.0 ['ITGA9-SEC13|1|fusion', 'ENSG00000144668|ENST00000264741|ITGA9'] 102611 6192 SLWKEVSEL True PC9_epitope_Rep5 1089.57062549929 1089.5695299358601 28.801 2 -0.7212578811061957 0.2220990336354783 1.0 ['nc|ENSG00000025156|Q03933-2|HSF2', 'ENSG00000025156|ENST00000368455|HSF2'] 20545 13231 EPRKRMWKWSR True H1975_Epitope_Rep3 1558.8303199363 1558.8292299358602 56.148 2 -0.7212594263354353 0.2220990336354783 1.0 ['ENST00000448493.7_2_13:99667890-99667971:-|nuORF'] 16167 5548 EEDRQELL True NCI_RA007_Epitope_Rep3 1030.4931034545798 1030.49200993586 28.818 2 -0.7212874409741669 0.2220990336354783 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 126443 25349 VLKSCCLLLIA True PC9_epitope_Rep3 1174.68177325474 1174.6806699358601 102.92 2 -0.7212961423850024 0.22211068828094568 1.0 ['ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 79221 6318 PAPLRAAPAA True PC9_epitope_Rep4 933.5396001545298 933.53850993586 31.364 2 -0.7213053396289758 0.2221223425771945 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 129946 24956 VRVGALLL True NCI_RA007_Epitope_Rep1 839.5592729699499 839.5587249679301 103.27 1 -0.7213738056074968 0.22214897824653923 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 2360 4177 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 21.186 2 -0.7214076638885132 0.222187265917603 1.0 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 3022 8596 AFNRAMNLVY True PC9_epitope_Rep4 1197.59646340765 1197.5948249037901 40.544 3 -0.7214394888949764 0.222187265917603 1.0 ['ZNF607|p.S656Rfs*68|1|0.53|ENSG00000198182|chr19:37698163-37698163|A/-|frameshift_variant'] 68931 4558 LTPCHGAL True PC9_epitope_Rep6 810.4058091036599 810.40470993586 24.791 2 -0.7214634504956121 0.22219891836826414 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 59710 8627 LGAYDLRRRER True NCI_RA007_Epitope_Rep2 1403.77457888199 1403.7734899358602 38.201 2 -0.7215645103908099 0.22226716402259075 1.0 ['ENSG00000172232|ENST00000233997|AZU1'] 55516 10393 LAGNQLTRL True PC9_epitope_Rep2 984.5716285588 984.57052993586 45.299 2 -0.7215674521289992 0.22226716402259075 1.0 ['nc|ENSG00000132000|Q6PEZ8-3|PODNL1', 'nc|ENSG00000132000|Q6PEZ8|PODNL1', 'ENSG00000132000|ENST00000588872|PODNL1', 'nc|ENSG00000132000|Q6PEZ8-2|PODNL1'] 79012 6156 PALAGPPAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 28.663 2 -0.7215789567395918 0.222278814752674 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 46087 9460 ISHFFAESP True H1975_Epitope_Rep2 1033.4868958753298 1033.48578993586 41.355 2 -0.7216006212910936 0.22229046513369785 1.0 ['CON__ENSEMBL:ENSBTAP00000031360'] 135640 621 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 3.4314 3 -0.7216338567157667 0.22229545522633992 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 42022 15021 IDGTIEIPKC True PC9_epitope_Rep5 1087.55834656343 1087.55724993586 62.782 2 -0.7216802293520223 0.22229545522633992 1.0 ['CON__P17690'] 36996 13815 GVNLVSPGLGR True NCI_RA007_Epitope_Rep2 1067.60874234351 1067.60817496793 58.386 1 -0.7216802784682786 0.22229545522633992 1.0 ['ENST00000475470.1_1_3:9882101-9883869:-|nuORF'] 82260 10892 PPFTDCGSIFI True H1975_Epitope_Rep1 1195.5583465634297 1195.55671490379 46.858 3 -0.7216960340863792 0.22230377471539844 1.0 ['ENST00000466767.1_1_1:160518048-160520985:-|nuORF'] 37380 9335 GVSLWHSL True PC9_epitope_Rep4 897.4708518883701 897.46974993586 43.514 2 -0.7217015162468602 0.22230377471539844 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|185|1|anti-sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|233|1|anti-sense'] 116921 13323 TVFSYFIKYW True NCI_RA007_Epitope_Rep2 1352.6805103014399 1352.6794099358601 56.461 2 -0.7217303504725274 0.2223304024804901 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 57415 20667 LEASEFLAE True PC9_epitope_Rep4 1007.48114178855 1007.48004993586 87.654 2 -0.7217944864523493 0.22237200802851922 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 129947 25144 VRVGALLL True NCI_RA007_Epitope_Rep1 839.5592729699499 839.5587249679301 104.05 1 -0.7218535709532607 0.2224136123301829 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 127862 15455 VPFSKEYF True PC9_epitope_Rep3 1015.5014833103099 1015.50038993586 64.6 2 -0.721903298347644 0.22245521538553711 1.0 ['RXFP3|p.Q361K|1|0.31|ENSG00000182631|chr5:33937821-33937821|C/A|missense_variant'] 19423 18506 ELMRRVRRF True PC9_epitope_Rep1 1261.71897858217 1261.71733490379 75.973 3 -0.7219350909979684 0.2224635293412815 1.0 ['ENSG00000167900|ENST00000301634|TK1'] 69419 12885 LTWTWLCQRRP True NCI_RA007_Epitope_Rep2 1458.7554236605397 1458.7543299358601 54.74 2 -0.7219390499001325 0.2224635293412815 1.0 ['ENST00000330175.8_2_17:48195058-48202283:-|nuORF', 'ENST00000507043.1_1_17:48195460-48202292:-|nuORF'] 81477 13425 PLGGLGPGE True PC9_epitope_Rep5 795.41266830591 795.41156993586 56.655 2 -0.7219524426777274 0.22249015232075725 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 115961 11533 TSHYLTSN True H1975_Epitope_Rep3 921.41921023833 921.41810993586 49.487 2 -0.7219831229295425 0.2225167745027558 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|32|1|sense'] 58163 10457 LEKRSDSL True PC9_epitope_Rep3 946.5083595959 946.50726993586 45.16 2 -0.7220070796587367 0.2225217534558416 1.0 ['ENSG00000181649|ENST00000314222|PHLDA2'] 99737 6057 SIIFFRDDRYW True PC9_epitope_Rep3 1516.7462984454799 1516.7446649037902 28.348 3 -0.7220321120670251 0.2225217534558416 1.0 ['ENSG00000271447|ENST00000605424|MMP28'] 82014 10957 PLVNLNYAV True NCI_RA007_Epitope_Rep3 1001.5545815123301 1001.55348993586 50.186 2 -0.7220615517958814 0.2225217534558416 1.0 ['nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000568535.1_1_15:73028121-73029372:+|nuORF'] 89343 11160 QWRMVTFLSRF True NCI_RA007_Epitope_Rep1 1469.7601746878097 1469.75906993586 47.408 2 -0.7221612514605613 0.2225633499071467 1.0 ['ENST00000262461.6_1_5:127522363-127522444:+|nuORF'] 4551 16963 AKKKKKKKKG True PC9_epitope_Rep2 1170.8288463009796 1170.82720490379 70.496 3 -0.7221756600171614 0.22257499288634627 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 67772 12762 LSYRKISV True PC9_epitope_Rep6 964.5705659296399 964.56946993586 60.581 2 -0.7222114645128658 0.22260161140563692 1.0 ['ABHD13|p.Q255Vfs*15|1|0.08|ENSG00000139826|chr13:108229976-108229979|TCTC/-|frameshift_variant'] 116626 7412 TVAGYLLHTSP True NCI_RA007_Epitope_Rep2 1157.6080736371698 1157.6069699358602 33.456 2 -0.7222479560655684 0.22262822912766755 1.0 ['ENST00000547237.1_1_14:25900789-25901323:-|nuORF'] 109526 13033 TDQIWKFQRHD True H1975_Epitope_Rep2 1472.71606094636 1472.7149699358602 55.251 2 -0.7223696156428921 0.22267479297383908 1.0 ['nc|ENSG00000142185|O94759-2|TRPM2', 'ENSG00000142185|ENST00000397928|TRPM2'] 25164 7161 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 32.937 2 -0.7223896493797264 0.22267479297383908 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 106531 9452 STLPKSLSL True PC9_epitope_Rep6 944.55424715916 944.55314993586 46.593 2 -0.7224017080268474 0.22267479297383908 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 94456 21862 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 90.406 2 -0.7224413679818552 0.22267479297383908 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 139288 23611 YLKFHLKRIR True PC9_epitope_Rep2 1372.8455589942798 1372.8444699358602 96.288 2 -0.7225447052987165 0.22273135669362085 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 75266 9224 NIHVGNISL True PC9_epitope_Rep1 965.5294293936499 965.52832993586 40.332 2 -0.722592599417328 0.22273966038752957 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 63916 7684 LNQMNVNIS True PC9_epitope_Rep5 1031.5069796969099 1031.50588993586 34.501 2 -0.7226431527646755 0.22273966038752957 1.0 ['ENST00000263826.9_1_1:243663119-243663200:-|nuORF'] 46271 13355 ISPHLTFSEGL True PC9_epitope_Rep1 1199.61863832087 1199.61700490379 56.23 3 -0.7226958700937433 0.22274959573576092 1.0 ['ENSG00000116678|ENST00000349533|LEPR'] 11099 5191 DC[Carbamidomethyl]QEC[Carbamidomethyl]PEGYR True NCI_RA007_Epitope_Rep1 1312.4812360837398 1312.48012993586 24.275 2 -0.722699161750851 0.22274959573576092 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 142773 12345 YYRFWYPKWEM True NCI_RA007_Epitope_Rep4 1667.7595059814696 1667.75840993586 54.483 2 -0.7227532057751391 0.22274959573576092 1.0 ['nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2', 'nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2', 'ENSG00000180481|ENST00000550916|GLIPR1L2'] 141434 16291 YTFESDVWS True PC9_epitope_Rep1 1132.4713053808398 1132.46965490379 67.481 3 -0.7227760359355697 0.22274959573576092 1.0 ['ENSG00000157404|ENST00000288135|KIT', 'nc|ENSG00000157404|P10721-2|KIT', 'nc|ENSG00000157404|P10721-4|KIT'] 42052 18723 IDIRLNKAV True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 77.242 2 -0.7228024126478275 0.22274959573576092 1.0 ['ENST00000426558.1_1_1:161654637-161654841:-|nuORF'] 76635 9419 NQRWEWLAWWR True NCI_RA007_Epitope_Rep2 1629.7953143265697 1629.7942099358602 41.249 2 -0.7228437281457071 0.22274959573576092 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 24530 14049 FAFRSRWQ True NCI_RA007_Epitope_Rep4 1096.5566472009998 1096.5555499358602 61.322 2 -0.7228510212673883 0.22275285945266182 1.0 ['ENSG00000203740|ENST00000439373|NTMT2'] 85414 15276 QEWELRRQDAK True NCI_RA007_Epitope_Rep2 1457.7375246669296 1457.73642993586 64.115 2 -0.7228695788338383 0.22275285945266182 1.0 ['DENND2A|p.R962W|1|0.4|ENSG00000146966|chr7:140521882-140521882|G/A|missense_variant'] 141641 6455 YTSETYLMKHM True NCI_RA007_Epitope_Rep2 1402.6261088534202 1402.6250099358601 29.717 2 -0.7228739441754182 0.22275285945266182 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 65258 18521 LQTLQESEVP True PC9_epitope_Rep1 1142.58191845898 1142.58082993586 76.03 2 -0.7228747767607592 0.22275285945266182 1.0 ['ENSG00000166261|ENST00000530393|ZNF202'] 63137 15618 LLRKFCQMRK True PC9_epitope_Rep4 1321.74750182913 1321.74586490379 67.997 3 -0.7228781484646393 0.22275285945266182 1.0 ['nc|ENSG00000050628|P43115-4|PTGER3', 'nc|ENSG00000050628|P43115-5|PTGER3', 'nc|ENSG00000050628|P43115-6|PTGER3', 'nc|ENSG00000050628|P43115-12|PTGER3'] 25122 6063 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 29.937 2 -0.722888161820659 0.22275285945266182 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 23552 8425 EVWQENVP True PC9_epitope_Rep1 999.4661604307499 999.46506993586 37.242 2 -0.7228971541722283 0.22275285945266182 1.0 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 52630 20783 KLPVFYSEF True PC9_epitope_Rep3 1128.58554728744 1128.5844499358602 85.214 2 -0.7229038111505285 0.22275285945266182 1.0 ['ENST00000350796.7_1_7:6204053-6204119:-|nuORF'] 7358 18365 ARRKELEEKMV True H1975_Epitope_Rep1 1387.76056861063 1387.7594699358601 76.537 2 -0.7229732688634798 0.22277613102188687 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 38677 5591 HFWRFGEWVD True PC9_epitope_Rep5 1377.6254550368099 1377.62380490379 26.508 3 -0.72297619942961 0.22277613102188687 1.0 ['ENSG00000149260|ENST00000648180|CAPN5', 'ENST00000533889.1_1_11:76804778-76823844:+|nuORF'] 13450 5404 DNDLGSSALR True H1975_Epitope_Rep3 1046.4992514641801 1046.49814993586 25.848 2 -0.7229977658781943 0.2227877662839264 1.0 ['ENST00000296550.11_1_4:150999880-151000132:+|nuORF'] 71705 12702 MEEFQRYCWNP True H1975_Epitope_Rep2 1501.6118557716097 1501.6107499358602 53.958 2 -0.7230565295734674 0.22279606592715678 1.0 ['ENSG00000186009|ENST00000335288|ATP4B'] 31533 2776 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 14.763 2 -0.7230633341237249 0.22279606592715678 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 10685 9303 CQSRGRCINL True PC9_epitope_Rep4 1148.5542813258398 1148.55262490379 43.392 3 -0.7231933807799331 0.22283096820549667 1.0 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-5|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'CRB1|p.N1184Kfs*10|1|0.64|ENSG00000134376|chr1:197435411-197435412|-/A|frameshift_variant', 'CRB1|p.G1260Vfs*3|1|0.28|ENSG00000134376|chr1:197438575-197438576|-/T|frameshift_variant', 'nc|ENSG00000134376|P82279-2|CRB1', 'CRB1|p.G899Efs*89|1|0.27|ENSG00000134376|chr1:197429467-197429467|G/-|frameshift_variant', 'CRB1|p.P680T|1|0.07|ENSG00000134376|chr1:197421866-197421866|C/A|missense_variant'] 129017 5836 VQLPAGVK True PC9_epitope_Rep3 810.49633836022 810.49524993586 27.515 2 -0.7232137985608724 0.22283096820549667 1.0 ['ENSG00000001630|ENST00000003100|CYP51A1'] 42377 13005 IECKPDHLLWR True PC9_epitope_Rep3 1408.7285402063599 1408.72690490379 55.052 3 -0.7232408593431536 0.22283096820549667 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2'] 61118 24606 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 106.86 3 -0.7233003297453982 0.22286586734922986 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 37265 15156 GVRRRRPPR True NCI_RA007_Epitope_Rep4 1148.7115251329599 1148.71042993586 65.883 2 -0.7233019524755031 0.22286586734922986 1.0 ['ENSG00000172986|ENST00000389617|GXYLT2'] 297 4352 AAGVLYRT True NCI_RA007_Epitope_Rep5 849.47085188837 849.46974993586 23.351 2 -0.7233160086551848 0.22286586734922986 1.0 ['ENSG00000140948|ENST00000671377|ZCCHC14'] 61120 24759 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 107.61 3 -0.723427761800643 0.22291239466554907 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 73623 8110 MWLRDWVKAR True NCI_RA007_Epitope_Rep5 1359.72339525627 1359.72175490379 37.882 3 -0.723454236856319 0.22291239466554907 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 18204 15711 EILTVLRRVD True H1975_Epitope_Rep2 1212.7190210684798 1212.7173749037902 65.6 3 -0.723470867986494 0.22291239466554907 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 105475 18781 SRWIILMQL True PC9_epitope_Rep2 1158.65833538822 1158.6572299358602 77.612 2 -0.7234718506050258 0.22291239466554907 1.0 ['ENST00000244217.5_1_2:71337227-71351364:-|nuORF'] 5729 2673 APAPPKAEA True PC9_epitope_Rep5 850.4548674710599 850.45376993586 14.793 2 -0.7235225404498496 0.2229522426927279 1.0 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF', 'ENST00000399247.6_1_6:29694709-29694913:-|nuORF', 'ENST00000606975.1_1_8:163470-182153:-|nuORF'] 113628 15952 TLVTQNSGV True PC9_epitope_Rep6 917.4818104948899 917.48070993586 73.655 2 -0.723532570606538 0.2229522426927279 1.0 ['ENSG00000173801|ENST00000393931|JUP'] 43337 12863 IFYTQSSL True PC9_epitope_Rep5 957.4807478657299 957.47964993586 54.486 2 -0.7235477238361032 0.2229522426927279 1.0 ['ENSG00000176198|ENST00000641082|OR11H4', 'nc|ENSG00000176198|Q8NGC9|OR11H4'] 37428 9385 GVTFVPIMKSP True PC9_epitope_Rep5 1174.6420166177397 1174.6403849037902 41.054 3 -0.723629237979467 0.2229522426927279 1.0 ['ENST00000282397.8_1_13:28979936-29001362:-|nuORF'] 61123 25004 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 108.84 3 -0.7236367503712442 0.2229522426927279 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 129818 22181 VRRLPGGG True PC9_epitope_Rep2 810.4824196315798 810.48132993586 90.806 2 -0.7236802151951458 0.2229522426927279 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 129273 23270 VQVLRRTPRT True PC9_epitope_Rep4 1224.7414878485597 1224.74038993586 97.76 2 -0.7237543339731176 0.2229871296019156 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'ENSG00000121440|ENST00000263666|PDZRN3'] 69030 11225 LTQESGPYK True H1975_Epitope_Rep3 1021.5080252427298 1021.50692993586 48.279 2 -0.7237728110643413 0.2229871296019156 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 25176 7602 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 36.623 2 -0.7238101192507648 0.2229871296019156 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 130515 7307 VSQGREVTL True PC9_epitope_Rep4 987.5349086969098 987.53380993586 35.436 2 -0.7238698350103756 0.2230436539411263 1.0 ['ENST00000382363.7_1_22:30775266-30775527:-|nuORF'] 110560 19096 TFQFSVPLP True PC9_epitope_Rep5 1034.5436824754597 1034.5425899358602 78.482 2 -0.7238979624237605 0.22305528119481607 1.0 ['SYT3|p.A375Pfs*76|1|0.13|ENSG00000213023|chr19:50629452-50629452|C/-|frameshift_variant'] 57272 9307 LDYLTMDIY True H1975_Epitope_Rep2 1145.53146310925 1145.53036993586 40.757 2 -0.7239185366987195 0.2230801460465673 1.0 ['ENSG00000160539|ENST00000372264|PLPP7'] 65070 6968 LQLEAKRQELN True NCI_RA007_Epitope_Rep1 1340.7412130650398 1340.7395549037901 31.106 3 -0.7239823040155556 0.2230801460465673 1.0 ['ENSG00000012232|ENST00000220562|EXTL3'] 4283 6805 AIGRCGFSGR True NCI_RA007_Epitope_Rep2 1022.5079827564199 1022.5068899358599 31.085 2 -0.7239847214186129 0.2230801460465673 1.0 ['nc|ENSG00000288642|P51861|CDR1'] 58189 12105 LELCIEVV True PC9_epitope_Rep3 916.49395540172 916.49284993586 51.604 2 -0.7240255176930985 0.2230801460465673 1.0 ['nc|ENSG00000059573|P54886-2|ALDH18A1', 'ENSG00000059573|ENST00000371224|ALDH18A1'] 136698 3880 WWWSWRWWKLQ True PC9_epitope_Rep4 1746.85718630714 1746.8560899358602 21.107 2 -0.7240312854524983 0.2230801460465673 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 125521 8386 VKEFKAAAT True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 37.21 2 -0.7240514773652216 0.2230801460465673 1.0 ['CON__Q2KIH2'] 94573 19803 RRRYLRRKER True NCI_RA007_Epitope_Rep3 1487.9021794369498 1487.90053490379 86.301 3 -0.7240678509362618 0.22308843333832112 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 61497 6831 LKDQVGRDQF True H1975_Epitope_Rep3 1204.6200353031998 1204.61892993586 31.231 2 -0.7241110013840797 0.22308843333832112 1.0 ['nc|ENSG00000182732|P49758-12|RGS6', 'nc|ENSG00000182732|P49758-6|RGS6', 'nc|ENSG00000182732|P49758-11|RGS6', 'nc|ENSG00000182732|P49758-7|RGS6', 'nc|ENSG00000182732|P49758-10|RGS6', 'nc|ENSG00000182732|P49758-9|RGS6', 'nc|ENSG00000182732|P49758-16|RGS6', 'nc|ENSG00000182732|P49758-5|RGS6', 'nc|ENSG00000182732|P49758-8|RGS6', 'nc|ENSG00000182732|P49758|RGS6', 'nc|ENSG00000182732|P49758-13|RGS6', 'nc|ENSG00000182732|P49758-14|RGS6', 'nc|ENSG00000182732|P49758-15|RGS6', 'nc|ENSG00000182732|P49758-2|RGS6', 'ENSG00000182732|ENST00000553525|RGS6'] 121999 16804 VFVFGPDK True PC9_epitope_Rep1 907.4803539429098 907.47924993586 69.461 2 -0.7242259302952004 0.22313827001630931 1.0 ['ENSG00000117592|ENST00000340385|PRDX6'] 45292 3970 IPWFQQWAHR True NCI_RA007_Epitope_Rep2 1367.68872399971 1367.68708490379 20.079 3 -0.7242399496151293 0.22313827001630931 1.0 ['ENST00000599145.1_1_19:58927017-58927281:+|nuORF'] 102349 11563 SLSTVKHF True PC9_epitope_Rep1 917.49706663621 917.49596993586 49.355 2 -0.7242667080389444 0.22313827001630931 1.0 ['PCDH18|p.P443H|1|0.21|ENSG00000189184|chr4:137530761-137530761|G/T|missense_variant', 'nc|ENSG00000189184|Q9HCL0-2|PCDH18', 'ENSG00000189184|ENST00000344876|PCDH18'] 31869 19804 GELGQVVECSL True PC9_epitope_Rep2 1132.54342477528 1132.5423299358602 81.565 2 -0.7244087483512651 0.22323966843223508 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant'] 133839 11126 VYGGGAAEI True PC9_epitope_Rep4 835.4075829254699 835.40703496793 50.573 1 -0.7244330537159991 0.2232810723475555 1.0 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 36332 7399 GVEMWVFETKV True H1975_Epitope_Rep1 1323.6533095774298 1323.6522099358601 33.465 2 -0.7244915128182393 0.2232810723475555 1.0 ['ENST00000593300.1_1_7:27139360-27139525:+|nuORF', 'ENST00000429611.7_1_7:27138873-27139525:+|nuORF', 'ENST00000434063.3_1_7:27135859-27139525:+|nuORF'] 63781 14804 LNETWEEKLRR True NCI_RA007_Epitope_Rep2 1472.7735758224799 1472.77246993586 62.259 2 -0.7245062615936817 0.2232810723475555 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A', 'KIF1A|p.G569Vfs*20|1|0.14|ENSG00000130294|chr2:240765745-240765746|-/A|frameshift_variant', 'KIF1A-C2orf54|2|fusion', 'KIF1A-C2orf54|1|fusion'] 25145 2792 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 15.583 2 -0.7245110675666184 0.2232810723475555 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 42567 2603 IEFGYWRRFQK True NCI_RA007_Epitope_Rep5 1528.7939173442398 1528.79227490379 14.729 3 -0.7245112432557214 0.2232810723475555 1.0 ['ENST00000450453.6_2_1:163292714-163292795:+|nuORF'] 121217 10047 VESTLQTP True H1975_Epitope_Rep2 873.4443623570099 873.44326993586 43.637 2 -0.7245261734383298 0.2232810723475555 1.0 ['nc|ENSG00000106785|Q14142-4|TRIM14', 'nc|ENSG00000106785|Q14142-2|TRIM14', 'nc|ENSG00000106785|Q14142-3|TRIM14', 'ENSG00000106785|ENST00000341469|TRIM14'] 102040 12569 SLQVEHTWP True PC9_epitope_Rep3 1095.53490869691 1095.53380993586 53.368 2 -0.724528006992179 0.2232810723475555 1.0 ['nc|ENSG00000150510|Q86V42-2|FAM124A'] 123757 17371 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 73.598 1 -0.7245315291395734 0.2232810723475555 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 32772 8518 GHDEFSMQAL True PC9_epitope_Rep1 1133.48115887189 1133.48006993586 37.601 2 -0.7245415489483209 0.2232810723475555 1.0 ['SPTBN2|p.T782M|1|0.29|ENSG00000173898|chr11:66704931-66704931|G/A|missense_variant'] 70616 25840 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 106.94 3 -0.724576391962854 0.2232810723475555 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 44346 8773 ILDTEDQVEI True NCI_RA007_Epitope_Rep5 1173.57649872537 1173.57540993586 40.414 2 -0.7247238188911042 0.22336908555101798 1.0 ['ENSG00000044459|ENST00000380647|CNTLN', 'nc|ENSG00000044459|Q9NXG0|CNTLN'] 39223 7234 HIHTGTSH True PC9_epitope_Rep6 888.4202132978401 888.41910993586 36.941 2 -0.7247455861110461 0.22336908555101798 1.0 ['ENST00000253928.13_1_16:2998732-2998981:+|nuORF'] 6494 9626 APSQNCSAK True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 43.668 2 -0.7247769221387973 0.22336908555101798 1.0 ['ENSG00000135312|ENST00000369947|HTR1B'] 103441 3200 SPPRRARHGS True NCI_RA007_Epitope_Rep1 1119.6009716244698 1119.5998699358602 16.341 2 -0.7247774639554206 0.22336908555101798 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 7892 6839 ATAHTRVPG True H1975_Epitope_Rep2 908.4828135543999 908.48170993586 31.222 2 -0.7247884575327823 0.22336908555101798 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 94574 20328 RRRYLRRKER True NCI_RA007_Epitope_Rep4 1487.9021794369498 1487.90053490379 88.007 3 -0.724818317535603 0.22338070306656693 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 25622 22011 FENGNYRRRKR True PC9_epitope_Rep2 1494.79162592846 1494.7905299358601 90.138 2 -0.7249280890353165 0.22341889547059177 1.0 ['ENSG00000176678|ENST00000320241|FOXL1'] 84509 9893 QAPGQPLGPV True PC9_epitope_Rep5 962.5185303567798 962.51742993586 43.023 2 -0.7249315874319424 0.22341889547059177 1.0 ['ENST00000382172.3_1_13:24460628-24463343:-|nuORF'] 129775 23323 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 102.81 3 -0.7249736873277194 0.22342382768678484 1.0 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 98752 16684 SGGRKGKG True PC9_epitope_Rep5 745.4194850218498 745.41893496793 69.178 1 -0.7249838672483494 0.22342382768678484 1.0 ['ENST00000374201.7_2_10:49482774-49482885:-|nuORF'] 21825 11824 ESAFPTTPAP True H1975_Epitope_Rep2 1016.4814761417199 1016.48036993586 50.557 2 -0.7250286684609211 0.22342382768678484 1.0 ['SEZ6L|p.V193F|1|0.7|ENSG00000100095|chr22:26292888-26292888|G/T|missense_variant'] 19810 9724 ELSNSTVYF True PC9_epitope_Rep3 1058.49204082542 1058.49094993586 42.356 2 -0.7250917863401305 0.2234270074630214 1.0 ['ENSG00000081087|ENST00000193322|OSTM1'] 46538 8345 ITAAINKEFSN True H1975_Epitope_Rep2 1206.6244519773 1206.62334993586 37.051 2 -0.7251058447215145 0.2234270074630214 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 5181 9695 ALMAHAMEEVK True NCI_RA007_Epitope_Rep1 1228.5944148023198 1228.5933099358601 41.712 2 -0.7251454429168452 0.2234270074630214 1.0 ['ENST00000307714.12_1_1:32479575-32503673:+|nuORF', 'nc|ENSG00000121774|Q07666-3|KHDRBS1', 'nc|ENSG00000121774|Q07666-2|KHDRBS1', 'ENSG00000121774|ENST00000327300|KHDRBS1'] 108868 13281 TAAFSLAL True PC9_epitope_Rep4 792.4381547777599 792.43704993586 58.982 2 -0.7251525475635067 0.2234270074630214 1.0 ['ENSG00000151148|ENST00000342494|UBE3B', 'nc|ENSG00000151148|Q7Z3V4-2|UBE3B', 'ENST00000540230.5_1_12:109928780-109928933:+|nuORF'] 25144 2723 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 15.245 2 -0.7251567102168643 0.2234270074630214 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 65972 17801 LSDVQKLNL True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 73.491 2 -0.7252035600322921 0.2234270074630214 1.0 ['LRRC30|p.E72D|1|0.14|ENSG00000206422|chr18:7231354-7231354|G/C|missense_variant'] 57981 8680 LEGWWVLTAP True H1975_Epitope_Rep2 1170.60734536118 1170.6062499358602 38.348 2 -0.7252348146104719 0.2234270074630214 1.0 ['ENST00000598636.1_1_19:47725000-47730056:-|nuORF'] 53170 8080 KQDADRPLSK True NCI_RA007_Epitope_Rep2 1156.6200353031998 1156.61892993586 36.062 2 -0.7252449694313332 0.2234270074630214 1.0 ['nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170', 'ENST00000502249.6_1_4:119401524-119435218:+|nuORF'] 112821 25021 TLILKIVITIF True H1975_Epitope_Rep2 1272.84209632328 1272.84046490379 102.82 3 -0.7252821314318137 0.2234386216798277 1.0 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 136102 18873 WRLNRMFL True NCI_RA007_Epitope_Rep5 1134.61205390214 1134.6103949037902 79.439 3 -0.7253709319358451 0.22344689378757515 1.0 ['ENST00000525154.1_1_11:9779436-9779646:-|nuORF'] 99656 14468 SIGCTPDTVAS True PC9_epitope_Rep3 1049.46992548185 1049.4688299358602 60.758 2 -0.7253729701718988 0.22344689378757515 1.0 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 141605 8292 YTRQERYRARP True NCI_RA007_Epitope_Rep1 1494.7803925384198 1494.77875490379 36.255 3 -0.7253927759381902 0.2234734622459509 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 71585 4522 MCTWWDSILR True NCI_RA007_Epitope_Rep5 1309.5947491554898 1309.59310490379 24.047 3 -0.7254553394160549 0.22351164216602612 1.0 ['ENST00000311597.9_1_22:50524051-50524099:-|nuORF'] 57235 10348 LDWIHHYVP True PC9_epitope_Rep3 1178.5872786229402 1178.5861899358601 44.748 2 -0.7254727539231054 0.22351164216602612 1.0 ['nc|ENSG00000172236|Q15661-2|TPSAB1', 'ENSG00000197253|ENST00000606293|TPSB2', 'ENSG00000172236|ENST00000338844|TPSAB1'] 126923 19808 VLQYGFKVE True PC9_epitope_Rep2 1081.5807962601698 1081.5796899358602 81.581 2 -0.7254898841190577 0.22353820846418423 1.0 ['ENSG00000156017|ENST00000376834|CARNMT1'] 132859 18800 VVLLRARPVI True PC9_epitope_Rep5 1134.76009803482 1134.7584449037902 77.326 3 -0.7255834441221833 0.22356301214187452 1.0 ['ITGA9-SEC13|1|fusion', 'ENSG00000144668|ENST00000264741|ITGA9'] 57372 8717 LEALEAVFP True H1975_Epitope_Rep1 987.5276980581499 987.52660993586 38.458 2 -0.7256162057967477 0.22356301214187452 1.0 ['DRGX|p.A53Pfs*16|1|0.14|ENSG00000165606|chr10:49390210-49390210|C/-|frameshift_variant'] 46516 6980 ISYCKDIPSF True NCI_RA007_Epitope_Rep2 1171.5583465634297 1171.55724993586 31.773 2 -0.7256205143800344 0.22356301214187452 1.0 ['nc|ENSG00000165521|Q05BV3|EML5', 'ENSG00000165521|ENST00000554922|EML5'] 18601 25906 EKRQRADD True NCI_RA007_Epitope_Rep5 1016.4999201705198 1016.49882993586 107.2 2 -0.7256528598587793 0.22356301214187452 1.0 ['SMPD3|p.P52Q|1|0.94|ENSG00000103056|chr16:68372027-68372027|G/T|missense_variant', 'SMPD3|p.E101Lfs*204|1|0.14|ENSG00000103056|chr16:68371881-68371882|-/AG|frameshift_variant', 'nc|ENSG00000103056|Q9NY59-2|SMPD3', 'ENSG00000103056|ENST00000219334|SMPD3'] 98620 12104 SFVNSQEWTL True H1975_Epitope_Rep1 1209.56660274801 1209.56550993586 51.572 2 -0.7256643302190342 0.22356301214187452 1.0 ['nc|ENSG00000133612|Q96P47-3|AGAP3', 'nc|ENSG00000133612|Q96P47-6|AGAP3', 'AGAP3|p.A692Cfs*27|1|0.14|ENSG00000133612|chr7:151142542-151142543|GG/-|frameshift_variant', 'nc|ENSG00000133612|Q96P47|AGAP3', 'nc|ENSG00000133612|Q96P47-2|AGAP3', 'ENSG00000133612|ENST00000397238|AGAP3'] 46799 10701 ITGMSHHARPF True NCI_RA007_Epitope_Rep1 1252.6135104541202 1252.6124099358601 45.614 2 -0.7256679674149346 0.22356301214187452 1.0 ['ENST00000330539.1_1_8:37593400-37593877:-|nuORF'] 78938 16185 PAGTGHMTWP True H1975_Epitope_Rep2 1053.47020026537 1053.4691099358602 67.465 2 -0.7257142581924612 0.2235862316456832 1.0 ['nc|ENSG00000108509|O94983-6|CAMTA2'] 27115 20415 FLIEIMEIN True PC9_epitope_Rep3 1120.58383303528 1120.58272993586 83.78 2 -0.7257411268992469 0.2235862316456832 1.0 ['ENSG00000100209|ENST00000216027|HSCB'] 37264 14953 GVRRRRPPR True NCI_RA007_Epitope_Rep3 1148.7115251329599 1148.71042993586 66.256 2 -0.7257730137953791 0.22359784087680737 1.0 ['ENSG00000172986|ENST00000389617|GXYLT2'] 117151 17812 TVLARMVSI True PC9_epitope_Rep4 988.57393705792 988.57282993586 76.546 2 -0.725869288579188 0.2236244019138756 1.0 ['ENST00000487364.1_1_19:19771386-19774475:-|nuORF', 'chr1:151185950-151194923|191|12.55|0.48|4.7|-|2|TE_info:AluSc8,AluSc8_dup1115,Alu,SINE,donor,+,151194923,151195210|VPS72,None|3', 'AluSc_dup13832|chr7:33006087-33006413:-|2.242044650319211|0.4159080058002372|2.43|536.0|13|1|anti-sense', 'ENST00000434453.1_1_7:156616573-156629563:-|nuORF'] 62087 9133 LLDYEESRFYL True H1975_Epitope_Rep3 1446.70309622082 1446.7019899358602 40.119 2 -0.7259255602737417 0.22365096215666633 1.0 ['PCDHGA5|p.S306L|1|0.15|ENSG00000253485|chr5:141365247-141365247|C/T|missense_variant'] 99757 15338 SIIPNKVDPVV True PC9_epitope_Rep3 1179.68632395787 1179.6852299358602 64.154 2 -0.7259809597839311 0.22367752160521515 1.0 ['PALD1|p.A57D|1|0.22|ENSG00000107719|chr10:70526121-70526121|C/A|missense_variant'] 93634 8931 RQQRRRFRFHH True NCI_RA007_Epitope_Rep4 1622.8879263551396 1622.88682993586 41.188 2 -0.7260494114862698 0.22370408025955774 1.0 ['ENST00000593149.5_1_19:39109743-39110988:+|nuORF'] 25624 11758 FENLDQQLR True H1975_Epitope_Rep1 1161.5778361380499 1161.5767299358602 50.219 2 -0.7261109109084055 0.223712342079689 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 60376 8986 LGTFALFP True NCI_RA007_Epitope_Rep5 864.47454028648 864.47344993586 41.222 2 -0.7261275093371506 0.223712342079689 1.0 ['ENST00000550505.5_2_12:117299165-117314498:-|nuORF'] 35548 12674 GSVEEQLKSLK True NCI_RA007_Epitope_Rep1 1216.66631678928 1216.66520993586 53.282 2 -0.7261454691341614 0.22373555399404968 1.0 ['nc|ENSG00000130347|Q8WWV3-2|RTN4IP1', 'ENSG00000130347|ENST00000369063|RTN4IP1'] 127643 7775 VPAFLYPFFR True H1975_Epitope_Rep1 1255.67536535135 1255.6742699358601 34.861 2 -0.7261554440962318 0.22373555399404968 1.0 ['SLC13A4|p.G70R|1|0.08|ENSG00000164707|chr7:135721415-135721415|C/T|missense_variant'] 59108 16270 LEYKRVPNS True PC9_epitope_Rep1 1104.5927579262 1104.5916699358602 67.401 2 -0.7261677398441991 0.2237471594306901 1.0 ['ENST00000475183.1_1_X:54953428-54957230:+|nuORF', 'nc|ENSG00000067445|Q12816-5|TRO', 'nc|ENSG00000067445|Q12816-2|TRO', 'ENST00000492706.5_1_X:54953428-54957450:+|nuORF', 'nc|ENSG00000067445|Q12816-3|TRO', 'TRO|p.S964Kfs*35|1|0.19|ENSG00000067445|chrX:54929613-54929614|-/A|frameshift_variant', 'nc|ENSG00000067445|Q12816-4|TRO', 'ENSG00000067445|ENST00000173898|TRO'] 233 9535 AAFTGVSAA True PC9_epitope_Rep2 793.39701824177 793.39592993586 42.023 2 -0.7262000017056354 0.22377036926296906 1.0 ['ENST00000462537.3_1_6:36646652-36648255:+|nuORF'] 84822 10853 QEAETCETPDP True H1975_Epitope_Rep2 1218.47104768066 1218.46994993586 46.775 2 -0.7262125473913634 0.22377036926296906 1.0 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 14647 21683 DVEAKSLEVW True PC9_epitope_Rep3 1174.5870038394198 1174.5859099358602 88.701 2 -0.7262315534886471 0.22377528291450524 1.0 ['ENSG00000014824|ENST00000264451|SLC30A9'] 106647 5525 STSRQFVDGP True H1975_Epitope_Rep2 1092.5199869087598 1092.5188899358602 26.26 2 -0.7262612712417154 0.22377528291450524 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'ENST00000548158.1_1_12:50393384-50398020:-|nuORF'] 25124 6441 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 31.376 2 -0.7262653402891175 0.22377528291450524 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 64717 14523 LPWARELESRE True PC9_epitope_Rep3 1384.70991293676 1384.70880993586 60.985 2 -0.7263133877190592 0.22383173378778365 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 59916 12728 LGGMGSGLDFA True PC9_epitope_Rep1 1023.4695315590299 1023.46842993586 53.832 2 -0.7263711799363276 0.2238515927470589 1.0 ['ENST00000490089.1_1_7:99998800-100014813:-|nuORF'] 135589 19204 WLCPTGITA True NCI_RA007_Epitope_Rep5 960.4738886634799 960.47278993586 80.735 2 -0.7263727593667626 0.2238515927470589 1.0 ['ENST00000594174.5_1_19:51378155-51379828:+|nuORF'] 91034 16777 RFKKHKLIPC True NCI_RA007_Epitope_Rep4 1268.75396710856 1268.7528699358602 72.718 2 -0.7264116146048761 0.2238515927470589 1.0 ['ENSG00000182348|ENST00000333190|ZNF804B', 'ZNF804B|p.K671Efs*10|1|0.18|ENSG00000182348|chr7:89334989-89334990|-/G|frameshift_variant'] 7359 18479 ARRKELEEKMV True H1975_Epitope_Rep2 1387.76056861063 1387.7594699358601 76.679 2 -0.7264557211782883 0.22387814284433016 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 107993 12876 SWMLVMEM True H1975_Epitope_Rep2 1025.43843175489 1025.4373299358601 54.639 2 -0.7265450142745538 0.2238830510754697 1.0 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 46535 13978 ISYWPADP True PC9_epitope_Rep3 947.4388830537498 947.43778993586 58.84 2 -0.7265740256089125 0.2238830510754697 1.0 ['ENSG00000102543|ENST00000251108|CDADC1'] 16369 9045 EEIPKYWDQGL True PC9_epitope_Rep3 1376.66123140884 1376.6601299358601 39.734 2 -0.7265794058540962 0.2238830510754697 1.0 ['ENSG00000169340|ENST00000302451|PDILT'] 25915 7585 FFPRLMTEL True PC9_epitope_Rep1 1152.6001518057599 1152.5985149037901 33.995 3 -0.7266294839400027 0.2238946518788676 1.0 ['ENSG00000156162|ENST00000414645|DPY19L4'] 135637 69 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 0.38314 3 -0.7267774595479685 0.22393614636114972 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 48999 13411 KEFLHFLTDQF True PC9_epitope_Rep1 1423.7136013348697 1423.71250993586 56.447 2 -0.7268347799549658 0.22397763960301328 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 66371 17961 LSGGVPPYT True PC9_epitope_Rep5 889.45453311789 889.45342993586 74.104 2 -0.7269176257772532 0.22399748905196765 1.0 ['ENST00000434316.6_1_13:114193706-114203864:+|nuORF', 'ENST00000460039.5_1_13:114200078-114203864:+|nuORF'] 137495 7647 YEEFWIKYAKY True NCI_RA007_Epitope_Rep2 1538.74456710998 1538.7429149037903 34.371 3 -0.7269329126630043 0.22399748905196765 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 52478 11103 KKVKKKKKKK True NCI_RA007_Epitope_Rep1 1269.9336457226898 1269.9325499358602 47.187 2 -0.7269388007477259 0.22399748905196765 1.0 ['PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'ENSG00000187257|ENST00000334955|RSBN1L'] 132400 21952 VVAGRRKS True PC9_epitope_Rep5 871.53518348043 871.53408993586 89.475 2 -0.7269476829559077 0.22400573913823252 1.0 ['ENSG00000151952|ENST00000422113|TMEM132D'] 8842 14115 AVEPESEFVIK True H1975_Epitope_Rep1 1246.6445187155398 1246.64397496793 59.463 1 -0.7269601249540902 0.22400573913823252 1.0 ['ENSG00000071991|ENST00000262150|CDH19', 'nc|ENSG00000071991|Q9H159-2|CDH19', 'CDH19|p.S198Ffs*3|1|0.16|ENSG00000071991|chr18:66554422-66554423|-/A|frameshift_variant'] 15433 7833 EALERERQRRR True H1975_Epitope_Rep2 1497.8236543327298 1497.8220149037902 35.079 3 -0.7271306259837546 0.22407711851741144 1.0 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000532904.5_1_11:62445243-62446247:-|nuORF', 'ENST00000533908.5_1_11:62445382-62446470:-|nuORF', 'ENST00000525717.5_1_11:62445243-62446470:-|nuORF', 'ENST00000524762.5_1_11:62445008-62446470:-|nuORF', 'nc|ENSG00000162191|Q04323-2|UBXN1'] 18326 17961 EISNSTRASP True PC9_epitope_Rep1 1060.51490152832 1060.51380993586 73.879 2 -0.7271357629822659 0.22408871486003795 1.0 ['nc|ENSG00000163081|Q96MF4|CCDC140'] 44898 14503 INMEKHFFK True PC9_epitope_Rep1 1192.60629981536 1192.60465490379 60.611 3 -0.7271626227463702 0.22410031085604973 1.0 ['ENST00000328747.11_1_7:64865258-64865408:+|nuORF'] 109763 13574 TEDPTGHFL True PC9_epitope_Rep5 1015.4610750503099 1015.45996993586 57.236 2 -0.7272373152564128 0.22413509676455204 1.0 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1'] 59127 16472 LEYQRIEK True PC9_epitope_Rep4 1077.5818588893299 1077.5807699358602 71.332 2 -0.7272568356243068 0.22413509676455204 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'nc|ENSG00000163617|Q8NCU4-2|CCDC191', 'ENST00000460813.5_1_3:113723412-113755878:-|nuORF'] 44560 6196 ILNSFEHEFLS True NCI_RA007_Epitope_Rep2 1334.65066672514 1334.6495699358602 28.709 2 -0.7272699631764667 0.22413509676455204 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 86378 23614 QKDLKRYKF True NCI_RA007_Epitope_Rep3 1224.69789170108 1224.6967899358601 102.42 2 -0.72734820806557 0.2241765795923247 1.0 ['ENSG00000215009|ENST00000399422|ACSM4'] 19161 13316 ELHLCHCPA True PC9_epitope_Rep3 1021.4473566458099 1021.44624993586 56.254 2 -0.7274035856129377 0.2241848232164739 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 123749 16501 VGRHQRGR True NCI_RA007_Epitope_Rep3 964.5427284723598 964.54217496793 72.705 1 -0.7274135322127391 0.2241848232164739 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 132327 12770 VTYLLSFWFFY True H1975_Epitope_Rep3 1484.7380251775598 1484.7369299358602 54.334 2 -0.7274711600440028 0.22425619031964017 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 65250 6413 LQTALTSWP True H1975_Epitope_Rep1 1015.53384606775 1015.53274993586 29.726 2 -0.727503075975374 0.22429766885833832 1.0 ['ENST00000270115.7_1_11:551752-552612:+|nuORF'] 94579 23121 RRRYLRRKER True PC9_epitope_Rep4 1487.9021794369498 1487.90053490379 97.154 3 -0.7275183015653605 0.22432085114013328 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 131212 6478 VTERKYSP True H1975_Epitope_Rep2 978.51344497634 978.51234993586 29.835 2 -0.7275928569275123 0.22432085114013328 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1', 'PRICKLE1|p.K698N|1|0.19|ENSG00000139174|chr12:42460211-42460211|C/A|missense_variant'] 83992 8133 PVSPVAPR True PC9_epitope_Rep5 821.47593726881 821.47484993586 36.222 2 -0.7276001395195673 0.2243290897137051 1.0 ['ENST00000446816.1_1_2:96874348-96906424:+|nuORF'] 117835 13178 TVYDRTTVL True PC9_epitope_Rep6 1066.5658744720201 1066.56476993586 62.334 2 -0.7276060715958896 0.2243290897137051 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 73791 8625 NAGKGWGLERK True NCI_RA007_Epitope_Rep2 1214.6520041378196 1214.65090993586 38.194 2 -0.7276891415655935 0.22433732779487792 1.0 ['ENST00000446880.5_1_1:155288166-155291089:-|nuORF'] 17099 8652 EGLPCMLSTL True PC9_epitope_Rep6 1062.5089538428601 1062.5078499358601 43.108 2 -0.7277060410898315 0.22433732779487792 1.0 ['ENST00000536587.5_1_11:95546139-95548377:+|nuORF'] 3176 10785 AGEAGRNERP True H1975_Epitope_Rep3 1055.5108192073899 1055.5097299358602 46.564 2 -0.7277327863057262 0.22434891747725133 1.0 ['ENST00000581005.1_1_17:71069947-71084903:-|nuORF'] 11589 5629 DGEEQQPPHEA True NCI_RA007_Epitope_Rep2 1235.50545904343 1235.50436993586 26.51 2 -0.7278149328374891 0.22439527274357174 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 85158 13049 QENFLAVEA True H1975_Epitope_Rep3 1019.4923751785898 1019.49126993586 55.433 2 -0.7278152834883815 0.22439527274357174 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1', 'nc|ENSG00000129534|Q6P0N0-2|MIS18BP1'] 13917 13624 DQWEKEFEKVP True PC9_epitope_Rep3 1433.68269512941 1433.68158993586 57.469 2 -0.7278497209163339 0.22439527274357174 1.0 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4'] 101648 11953 SLLSNDLK True PC9_epitope_Rep4 888.4916469026 888.49054993586 53.768 2 -0.7278593027154039 0.22439527274357174 1.0 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163564|Q6K0P9-4|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-2|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-6|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1', 'PYHIN1|p.S122Kfs*7|1|0.15|ENSG00000163564|chr1:158938493-158938494|-/A|frameshift_variant', 'nc|ENSG00000163564|Q6K0P9-5|PYHIN1'] 28334 4675 FRSATTSGAPG True NCI_RA007_Epitope_Rep4 1050.50942222506 1050.50832993586 24.404 2 -0.7279555544014559 0.22443309133279554 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 8962 7576 AVGFSGSLQSL True PC9_epitope_Rep6 1064.55022440788 1064.54912993586 38.414 2 -0.728037712026406 0.22443309133279554 1.0 ['nc|ENSG00000174521|Q8N6N2-2|TTC9B'] 101140 8787 SLGQYTSIV True PC9_epitope_Rep3 966.5022115863 966.50110993586 38.751 2 -0.7280478015160506 0.22443309133279554 1.0 ['SLC6A1|p.G111V|1|0.44|ENSG00000157103|chr3:11017936-11017936|G/T|missense_variant'] 56647 13502 LDIPMISWVVM True H1975_Epitope_Rep1 1302.67160249386 1302.67050993586 57.055 2 -0.7280530219966642 0.22443309133279554 1.0 ['ENSG00000115760|ENST00000421745|BIRC6'] 129824 22117 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 98.015 2 -0.7280809745637438 0.22443309133279554 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 86426 4407 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 21.778 3 -0.728093758147698 0.22443309133279554 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 33063 20836 GILSFGYSS True PC9_epitope_Rep5 929.4494477374501 929.44834993586 85.194 2 -0.7281168020423716 0.22443309133279554 1.0 ['ENST00000543845.1_12:9099387-9102125:-|nuORF', 'ENST00000544245.1_12:9098881-9102125:-|nuORF', 'ENST00000540837.1_12:9098881-9102125:-|nuORF'] 55836 6001 LAPLCWPPT True NCI_RA007_Epitope_Rep5 996.5102741722 996.50916993586 29.766 2 -0.7281195402160577 0.22443309133279554 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 113943 12055 TPAALQVVIKY True NCI_RA007_Epitope_Rep1 1201.7070594024499 1201.7059699358601 50.879 2 -0.7281749447018551 0.22443309133279554 1.0 ['ENST00000582287.6_1_19:18545725-18546537:-|nuORF'] 25071 1860 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 10.144 2 -0.728210464728116 0.22443309133279554 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 109485 6229 TDLPPPPPP True H1975_Epitope_Rep3 929.4858332461699 929.48472993586 28.972 2 -0.7282687640084081 0.22443309133279554 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 82526 24831 PPRRGGVLLG True PC9_epitope_Rep4 1020.6192474575597 1020.61814993586 104.02 2 -0.7283086923276769 0.2244413240917782 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 120763 12928 VEKSHISV True PC9_epitope_Rep3 897.4919812557699 897.49088993586 54.752 2 -0.7283137483497284 0.2244413240917782 1.0 ['ENST00000294740.3_1_1:200377749-200377815:-|nuORF'] 74039 21096 NDLAVAYIL True PC9_epitope_Rep5 990.5385970950199 990.53750993586 86.209 2 -0.7283907603894602 0.22451265964597805 1.0 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-7|PARPBP', 'nc|ENSG00000185480|Q9NWS1-6|PARPBP'] 23021 9151 EVFTEMEEK True NCI_RA007_Epitope_Rep5 1140.50089125696 1140.49924490379 41.848 3 -0.7284457965569381 0.22456570122634323 1.0 ['nc|ENSG00000160201|Q01081-4|U2AF1', 'nc|ENSG00000160201|Q01081-2|U2AF1', 'ENSG00000160201|ENST00000291552|U2AF1'] 32478 9624 GGCGRFAP True H1975_Epitope_Rep2 763.3435432002699 763.34299496793 41.995 1 -0.7284469264835142 0.22456570122634323 1.0 ['ENST00000369649.8_1_X:153718678-153718952:-|nuORF'] 44119 13913 IIQFFIPQP True H1975_Epitope_Rep2 1101.62226714933 1101.62116993586 58.663 2 -0.7284488310500477 0.22457728386210193 1.0 ['USH2A|p.S391I|1|0.17|ENSG00000042781|chr1:216324324-216324324|C/A|missense_variant'] 65799 11439 LSDIPLKPEV True H1975_Epitope_Rep1 1109.63322575585 1109.6321299358601 48.98 2 -0.7284934596288289 0.2246153846153846 1.0 ['ENSG00000136478|ENST00000584379|TEX2', 'nc|ENSG00000136478|Q8IWB9-2|TEX2'] 83065 17613 PSLQHCLKRS True NCI_RA007_Epitope_Rep5 1167.61826148139 1167.6166049037902 74.53 3 -0.728498389113204 0.2246153846153846 1.0 ['ENST00000607664.1_1_11:18363085-18363274:+|nuORF'] 19272 5598 ELKKFKLKLL True PC9_epitope_Rep1 1258.8376796491798 1258.83658993586 26.36 2 -0.7285618862219418 0.22465683858344163 1.0 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD'] 123961 18806 VGRYLTLAI True PC9_epitope_Rep2 1004.6018660579199 1004.60076993586 77.708 2 -0.7286009004970984 0.2246982913131796 1.0 ['ENSG00000174136|ENST00000513185|RGMB'] 65129 10395 LQNIQETVV True PC9_epitope_Rep5 1042.56587447202 1042.56476993586 44.969 2 -0.7286554155293962 0.224724806954132 1.0 ['ENST00000282096.8_1_11:14665308-14793517:+|nuORF'] 71632 17195 MDQYNHSSL True PC9_epitope_Rep1 1093.44985874361 1093.4487699358601 70.96 2 -0.7288034351504803 0.22475132180302895 1.0 ['OR6N2|p.A75Cfs*6|1|0.22|ENSG00000188340|chr1:158777413-158777414|-/A|frameshift_variant', 'ENSG00000188340|ENST00000641131|OR6N2'] 70758 18406 LWWWSWRWWKL True NCI_RA007_Epitope_Rep2 1731.88267277899 1731.8815699358602 76.356 2 -0.7288291356831322 0.22476290045552982 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 127140 10585 VLTTNETL True PC9_epitope_Rep3 889.4756624852901 889.47456993586 45.662 2 -0.7289078516760509 0.22480921160710285 1.0 ['ENST00000609318.5_1_10:858775-858832:-|nuORF'] 30946 12638 GARLRRKP True H1975_Epitope_Rep3 952.6042660997599 952.60316993586 53.817 2 -0.7289471436801894 0.22480921160710285 1.0 ['ENST00000510509.1_1_5:41870266-41870568:+|nuORF'] 21366 4737 ERGLWHEEMK True H1975_Epitope_Rep3 1313.61865540421 1313.61700490379 23.346 3 -0.7290041918898952 0.22480921160710285 1.0 ['ENSG00000167325|ENST00000300738|RRM1'] 15195 10204 EADAALQMI True H1975_Epitope_Rep2 960.4586325221601 960.45752993586 44.255 2 -0.7290159846409262 0.22480921160710285 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 11484 10772 DFHHHHFP True H1975_Epitope_Rep3 1072.4627468161602 1072.4616499358601 46.515 2 -0.7290446545244749 0.22482078853046594 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 136828 13134 YACSTCTP True PC9_epitope_Rep1 844.30952576032 844.30842993586 55.388 2 -0.7290534701953065 0.22483236510804797 1.0 ['ENSG00000012963|ENST00000013070|UBR7'] 96530 10669 SADRGLVL True PC9_epitope_Rep4 829.46576650793 829.46466993586 48.786 2 -0.7291057599635324 0.22487380902601475 1.0 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'FCAR|p.L128F|1|0.12|ENSG00000186431|chr19:54888027-54888027|C/T|missense_variant', 'nc|ENSG00000186431|P24071-7|FCAR'] 101448 8312 SLKVSNDGP True PC9_epitope_Rep6 915.4661604307499 915.46506993586 41.601 2 -0.7291481336861386 0.22487866796087508 1.0 ['nc|ENSG00000185664|P40967-4|PMEL', 'nc|ENSG00000185664|P40967-5|PMEL', 'ENSG00000185664|ENST00000548747|PMEL', 'nc|ENSG00000185664|P40967-2|PMEL', 'ENST00000549413.1_1_12:56355068-56359795:-|nuORF', 'ENST00000550590.5_1_12:56352149-56359825:-|nuORF'] 139207 14195 YLEVKRLIF True PC9_epitope_Rep4 1179.7015800991899 1179.6999449037899 62.507 3 -0.7291850511430424 0.22487866796087508 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14'] 56292 6720 LDALDHAGY True PC9_epitope_Rep5 973.4505103666099 973.44940993586 30.819 2 -0.7291867460463279 0.22487866796087508 1.0 ['ENSG00000107201|ENST00000379883|RIGI', 'ENST00000379868.5_1_9:32491415-32526182:-|nuORF'] 89666 5573 QYVQENGRI True NCI_RA007_Epitope_Rep4 1105.55162139021 1105.5505299358601 28.037 2 -0.729355673828607 0.2249432564807072 1.0 ['ENST00000247843.6_1_12:69753721-69753781:+|nuORF'] 57836 16355 LEEVASIVL True PC9_epitope_Rep6 971.5539128059899 971.55280993586 75.288 2 -0.7293567447450499 0.2249432564807072 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 23042 8509 EVHAGVGEPL True NCI_RA007_Epitope_Rep3 1006.5083595958998 1006.50726993586 40.544 2 -0.7293772063457911 0.2249432564807072 1.0 ['ENST00000419794.1_1_9:34318647-34318803:+|nuORF'] 101038 7715 SLGEDNFPP True H1975_Epitope_Rep2 974.4345259492999 974.43342993586 34.628 2 -0.7294116466865677 0.2249514708078244 1.0 ['ENST00000601237.5_1_19:53122096-53138333:-|nuORF'] 83920 11825 PVQERMWLLWQ True H1975_Epitope_Rep1 1484.7598403346399 1484.75818490379 50.48 3 -0.729432792943003 0.2249514708078244 1.0 ['ENST00000428370.1_3_7:66038415-66041909:-|nuORF'] 80020 9744 PFFFFEDYFY True PC9_epitope_Rep5 1420.6015912743997 1420.6004899358602 42.45 2 -0.7295225297714311 0.22495968464432897 1.0 ['ENST00000545576.1_1_12:8756882-8757648:-|nuORF'] 23815 16077 EYIEATGL True PC9_epitope_Rep3 894.4334633201399 894.4329149679301 66.99 1 -0.7295457180637194 0.22495968464432897 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 56707 11167 LDLAYNLLEGH True H1975_Epitope_Rep1 1256.64010204144 1256.63900993586 47.922 2 -0.7295706240461324 0.22497125707374613 1.0 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000465230.5_1_2:220470314-220471132:+|nuORF'] 99251 8998 SHNTGSYVTG True PC9_epitope_Rep1 1021.4464876153299 1021.44538993586 39.458 2 -0.7295754907847724 0.22497946995147444 1.0 ['L1MB8_dup1763|chr2:109988481-109989376:-|1.014056839554144|0.259115602067641|1.97|534.0|48|2|anti-sense'] 16188 20455 EEEDSLSPLQI True PC9_epitope_Rep3 1258.5928770654998 1258.59178993586 83.936 2 -0.7295833520131277 0.22497946995147444 1.0 ['MAGEC1|p.G685E|1|0.55|ENSG00000155495|chrX:141907458-141907458|G/A|missense_variant'] 94572 19716 RRRYLRRKER True NCI_RA007_Epitope_Rep3 1487.9021794369498 1487.90053490379 85.961 3 -0.729620760158046 0.22499253508510003 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 25575 13866 FEKTFQLKEK True NCI_RA007_Epitope_Rep1 1296.70778767844 1296.7066899358601 57.955 2 -0.7296483393543527 0.22499253508510003 1.0 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 91986 11062 RKQRNEQYQK True NCI_RA007_Epitope_Rep2 1376.7272943363998 1376.72618993586 47.624 2 -0.7296495944296718 0.22499253508510003 1.0 ['ENSG00000165923|ENST00000525123|AGBL2', 'nc|ENSG00000165923|Q5U5Z8-3|AGBL2', 'nc|ENSG00000165923|Q5U5Z8-2|AGBL2'] 69294 18036 LTTRRLGT True PC9_epitope_Rep4 916.5454138109599 916.54430993586 77.441 2 -0.7296578775529593 0.22499253508510003 1.0 ['ENSG00000185002|ENST00000332958|RFX6', 'RFX6|p.W295Cfs*49|1|0.24|ENSG00000185002|chr6:116916226-116916226|G/-|frameshift_variant', 'RFX6|p.W356Cfs*14|1|0.09|ENSG00000185002|chr6:116919181-116919182|GG/-|frameshift_variant', 'RFX6|p.E632Sfs*9|1|0.26|ENSG00000185002|chr6:116927034-116927034|G/-|frameshift_variant', 'nc|ENSG00000111783|Q33E94-4|RFX4', 'ENST00000536688.5_1_12:106995054-107126892:+|nuORF', 'ENSG00000111783|ENST00000392842|RFX4', 'nc|ENSG00000111783|Q33E94-2|RFX4'] 343 8978 AAIKGNQESVK True PC9_epitope_Rep6 1143.62478633047 1143.62368993586 44.551 2 -0.7296695482750536 0.22499253508510003 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 82834 27285 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 114.57 3 -0.7296992651733858 0.22500074646920068 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 22054 13220 ESLPTMFSML True PC9_epitope_Rep3 1154.5351685907 1154.53406993586 55.887 2 -0.7297345277285507 0.22500074646920068 1.0 ['ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 10879 6800 CWWRYWWHYPI True NCI_RA007_Epitope_Rep2 1694.76050904098 1694.75940993586 31.066 2 -0.7297430548798619 0.22500559826826902 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 135612 24498 WLKKILLLL True H1975_Epitope_Rep1 1138.7841875243398 1138.78308993586 101.53 2 -0.7297586264800294 0.22500559826826902 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 55392 10895 LAERKFMNPF True PC9_epitope_Rep4 1251.64341360007 1251.64230993586 49.673 2 -0.7297636707376742 0.22500559826826902 1.0 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 112199 7991 TKHDQREYDDQ True NCI_RA007_Epitope_Rep4 1433.61713475073 1433.61602993586 37.502 2 -0.7298965515077632 0.2250735217280965 1.0 ['ENSG00000180611|ENST00000392452|MB21D2'] 111599 7399 TIDEEAEMEEQ True H1975_Epitope_Rep1 1322.5183917959 1322.5172899358602 33.465 2 -0.7298968980679037 0.2250735217280965 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant'] 11195 7122 DDYKTIKS True PC9_epitope_Rep5 968.48147614172 968.48036993586 32.362 2 -0.7301152000424717 0.22517465814772794 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-2|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-1|CFAP47'] 35401 8038 GSDFDC[Carbamidomethyl]ELR True NCI_RA007_Epitope_Rep1 1097.4447736425998 1097.44366993586 35.263 2 -0.7302129070565362 0.22527579154786606 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 36829 7076 GVLGAVEG True PC9_epitope_Rep4 700.3755545212 700.3750049679301 34.484 1 -0.7303470268167171 0.22530228392297358 1.0 ['XKR6|p.G192V|1|0.24|ENSG00000171044|chr8:11200765-11200765|C/A|missense_variant'] 81466 22620 PLGAKEFGL True PC9_epitope_Rep1 930.5174677276199 930.51636993586 91.817 2 -0.7303541609693034 0.22531384812885313 1.0 ['ENST00000455680.5_1_1:91297146-91297428:-|nuORF'] 102243 8959 SLSGIQLFDR True PC9_epitope_Rep2 1134.6033226099 1134.6022299358601 39.818 2 -0.7304470766414246 0.22531532203895813 1.0 ['ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 94625 6339 RRVEEQREQEK True H1975_Epitope_Rep1 1485.7648020439299 1485.76370993586 29.447 2 -0.7304650670680631 0.22531532203895813 1.0 ['ENSG00000158195|ENST00000618852|WASF2'] 61642 17615 LKQIVKHDRE True NCI_RA007_Epitope_Rep4 1264.7251690780797 1264.7240699358601 76.207 2 -0.730481890098448 0.22531532203895813 1.0 ['ENSG00000164588|ENST00000303230|HCN1'] 45211 14540 IPSAPEYNFT True H1975_Epitope_Rep2 1137.5342399905699 1137.5331499358601 61.085 2 -0.7305254547085408 0.22531532203895813 1.0 ['ENST00000375169.7_1_X:54321071-54321176:-|nuORF'] 142799 1577 YYRWLNYGGV True NCI_RA007_Epitope_Rep2 1289.6193070272097 1289.61766490379 8.585 3 -0.7305449720892035 0.22531679577307123 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF', 'ENST00000546761.5_1_12:57139854-57146049:-|nuORF'] 140487 9416 YRKMKERL True PC9_epitope_Rep6 1122.6331832695398 1122.6315449037902 46.437 3 -0.7305540635371887 0.22531679577307123 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 21640 6752 ERRTMLLFCQP True PC9_epitope_Rep2 1392.7006112063598 1392.69895490379 31.378 3 -0.7305642507724072 0.22531679577307123 1.0 ['nc|ENSG00000105971|P51636-3|CAV2'] 56381 13833 LDDSALYLSDK True PC9_epitope_Rep5 1238.60304782638 1238.6019499358601 58.229 2 -0.7305828304639356 0.22531679577307123 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 94570 20944 RRRYLRRKER True H1975_Epitope_Rep3 1487.9021794369498 1487.90053490379 87.476 3 -0.7305983771318639 0.22534328358208955 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 81832 11645 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 52.551 2 -0.7306328809178998 0.2253697706004388 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 83827 12323 PVLPWSEV True H1975_Epitope_Rep1 925.49091862661 925.48982993586 52.428 2 -0.7307247106165097 0.2254111817557685 1.0 ['ENST00000463096.5_1_2:97751812-97756058:-|nuORF', 'ENST00000483657.1_1_2:97755791-97757446:-|nuORF', 'ENSG00000144199|ENST00000414820|FAHD2B'] 71468 12850 LYVRDTLQP True PC9_epitope_Rep2 1103.59750895347 1103.59640993586 54.728 2 -0.7309034445671321 0.22552048354600404 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 79220 6370 PAPLRAAPAA True PC9_epitope_Rep2 933.5396001545298 933.53850993586 29.906 2 -0.7309092535000803 0.22552048354600404 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 36817 13969 GVLEPLQK True H1975_Epitope_Rep1 882.5174677276199 882.51636993586 58.889 2 -0.7309162052537612 0.22552048354600404 1.0 ['ENST00000378204.6_1_8:119123785-119123992:-|nuORF'] 104437 7523 SQLKKFYNQ True NCI_RA007_Epitope_Rep4 1154.6084079903399 1154.60730993586 35.582 2 -0.7309303117727864 0.22552867610846627 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.L617Afs*13|1|0.14|ENSG00000151655|chr10:7734980-7735002|TCTCTAGACCACCACATTGTGAC/-|frameshift_variant'] 110248 6366 TERFRNPV True H1975_Epitope_Rep3 1017.5355774032498 1017.53448993586 29.47 2 -0.7309772049617081 0.22552867610846627 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1'] 30912 6825 GAQLSWLYKE True NCI_RA007_Epitope_Rep2 1193.6080736371703 1193.6069699358602 31.162 2 -0.7310301564862394 0.22555179155038876 1.0 ['ENSG00000178605|ENST00000326153|GTPBP6', 'ENST00000485332.7_1_X:221743-228403:-|nuORF'] 32788 2690 GHFEVFYWTH True NCI_RA007_Epitope_Rep2 1321.58800689893 1321.58635490379 14.689 3 -0.731042481727488 0.22555179155038876 1.0 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 29455 12677 FVENSVYANIG True NCI_RA007_Epitope_Rep4 1211.5822528121498 1211.5811499358601 55.802 2 -0.7310999151784147 0.22557299749313597 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4', 'FRMPD4|p.S1105Kfs*31|1|0.55|ENSG00000169933|chrX:12718133-12718134|-/A|frameshift_variant', 'FRMPD4|p.A947Qfs*130|1|0.11|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant'] 33736 8294 GLIKQIGENLI True PC9_epitope_Rep3 1196.71287305888 1196.71123490379 36.876 3 -0.7311209691092726 0.22557299749313597 1.0 ['ENSG00000151640|ENST00000338492|DPYSL4', 'nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2', 'CRMP1|p.G68Efs*16|1|0.1|ENSG00000072832|chr4:5861138-5861138|G/-|frameshift_variant', 'ENST00000511535.1_1_4:5823489-5889136:-|nuORF', 'nc|ENSG00000072832|Q14194|CRMP1', 'CRMP1|p.N462Kfs*26|1|0.1|ENSG00000072832|chr4:5828564-5828565|-/T|frameshift_variant', 'ENSG00000072832|ENST00000324989|CRMP1'] 129600 7721 VRNHFYERCFK True NCI_RA007_Epitope_Rep1 1497.72993718869 1497.72829490379 34.025 3 -0.7311364979221249 0.22557299749313597 1.0 ['ENSG00000137473|ENST00000325106|TTC29', 'nc|ENSG00000137473|Q8NA56-2|TTC29'] 120045 12034 VDSLQKFSSL True PC9_epitope_Rep5 1122.59208921986 1122.59044490379 51.283 3 -0.7311577636733674 0.22557299749313597 1.0 ['TMEM132B|p.G937Afs*35|1|0.09|ENSG00000139364|chr12:125654281-125654281|G/-|frameshift_variant', 'nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-2|TMEM132B'] 28572 17422 FSFFWGGII True PC9_epitope_Rep4 1072.5382031721997 1072.5371099358601 75.007 2 -0.7311748182858064 0.22557299749313597 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF'] 15322 9733 EAFSPVSYQHD True PC9_epitope_Rep5 1278.55168095986 1278.5505899358602 42.408 2 -0.7311868974562096 0.22557299749313597 1.0 ['ENSG00000131187|ENST00000253496|F12', 'ENST00000514943.1_1_5:176829841-176830524:-|nuORF', 'ENST00000504406.5_1_5:176830401-176830713:-|nuORF', 'ENST00000502854.5_1_5:176829295-176830776:-|nuORF', 'LMAN2-F12|1|fusion'] 41865 9447 IAYTDPELDMV True NCI_RA007_Epitope_Rep1 1265.58495523409 1265.5838499358601 40.74 2 -0.731188513602244 0.22557299749313597 1.0 ['KMT2C|p.G2767V|1|0.12|ENSG00000055609|chr7:152177153-152177153|C/A|missense_variant'] 64076 23152 LPAVLLHTAF True NCI_RA007_Epitope_Rep5 1080.6331661862002 1080.63206993586 96.31 2 -0.7312113081390766 0.2255845531730755 1.0 ['ENST00000428443.7_1_2:179967411-179967483:-|nuORF'] 49596 12791 KFYRPENTHKS True NCI_RA007_Epitope_Rep1 1405.7102472899298 1405.70967496793 53.741 1 -0.7312671792261952 0.22559610850816197 1.0 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 66974 11605 LSPEKYVTSAP True PC9_epitope_Rep1 1190.6183039677 1190.61664490379 49.517 3 -0.731360889989073 0.22563750578194244 1.0 ['nc|ENSG00000211899|P01871-1|IGHM', 'nc|ENSG00000211899|P01871|IGHM'] 92202 24245 RLHSKDQRKR True PC9_epitope_Rep2 1322.7643485514598 1322.76377496793 98.798 1 -0.7314294591624921 0.22567890182035213 1.0 ['ENSG00000242732|ENST00000609883|RTL5'] 6703 5136 AQALNARAL True NCI_RA007_Epitope_Rep3 926.52976374682 926.52866993586 27.197 2 -0.7314912833193359 0.22569045523045017 1.0 ['UBA1|p.V365L|1|0.41|ENSG00000130985|chrX:47202674-47202674|G/T|missense_variant'] 15993 11724 EDRQYQIDL True PC9_epitope_Rep5 1178.5567663402999 1178.5551149037901 50.095 3 -0.7315221874606317 0.22574003342086416 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'VPS13B|p.I2411Rfs*23|1|0.19|ENSG00000132549|chr8:99766880-99766893|TCAATCTCGTGAAT/-|frameshift_variant', 'ENST00000496144.5_1_8:100515159-100589873:+|nuORF'] 88736 16307 QTITKQYYRR True PC9_epitope_Rep6 1355.73098273451 1355.72988993586 75.086 2 -0.7315728656949748 0.22574003342086416 1.0 ['nc|ENSG00000139998|P59190-2|RAB15', 'ENSG00000139998|ENST00000533601|RAB15'] 20176 15456 ENGFWAVEL True PC9_epitope_Rep3 1063.4974605590298 1063.49636993586 64.604 2 -0.7315759016529046 0.22574003342086416 1.0 ['BTN1A1|p.A416Efs*11|1|0.35|ENSG00000124557|chr6:26508840-26508840|C/-|frameshift_variant', 'ENSG00000124557|ENST00000684113|BTN1A1'] 100076 20704 SIRTRKLQ True PC9_epitope_Rep4 1000.61416207712 1000.61306993586 87.799 2 -0.7316156514093329 0.2257482171097783 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 60744 22059 LHRPRITR True PC9_epitope_Rep4 1047.6413798844699 1047.64087496793 93.072 1 -0.7316306096913314 0.2257482171097783 1.0 ['ENSG00000141384|ENST00000269142|TAF4B'] 61573 23727 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 97.767 3 -0.7316651008690512 0.22577131944858864 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 92430 8161 RLRFRQFRYQE True H1975_Epitope_Rep1 1597.8589772122898 1597.85734490379 36.332 3 -0.7316989114359865 0.22577131944858864 1.0 ['nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25', 'ENSG00000197037|ENST00000394152|ZSCAN25', 'ENST00000466948.1_1_7:99217289-99228306:+|nuORF', 'ENST00000481424.5_1_7:99217223-99217685:+|nuORF', 'nc|ENSG00000197037|Q6NSZ9-4|ZSCAN25'] 12943 19046 DLLAKDKTI True PC9_epitope_Rep1 1015.59136094387 1015.59026993586 78.052 2 -0.7318470280756475 0.22581270793238747 1.0 ['OR4S2|p.H241Tfs*40|1|0.3|ENSG00000174982|chr11:55651622-55651622|C/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 94795 16993 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 72.123 2 -0.7319210816072771 0.22585072578359267 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 129631 15320 VRPGHGKG True NCI_RA007_Epitope_Rep5 806.4511195033 806.45002993586 65.627 2 -0.7319214271180279 0.22585072578359267 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 94792 16355 RSPRGILG True NCI_RA007_Epitope_Rep3 854.5086343794198 854.50752993586 72.044 2 -0.7319558184121516 0.2258622747344552 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 67273 15186 LSRRRQRAFP True PC9_epitope_Rep1 1285.74797021133 1285.74686993586 63.235 2 -0.7319937842858119 0.22590365939164292 1.0 ['ENSG00000204946|ENST00000434415|ZNF783'] 81283 11063 PLAAGIVG True NCI_RA007_Epitope_Rep5 696.41702541036 696.4164749679301 49.188 1 -0.7320066436067351 0.22591520720828237 1.0 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000476524.1_1_21:34903719-34911621:-|nuORF'] 60095 10839 LGLRPLHQL True PC9_epitope_Rep6 1045.63964854897 1045.63854993586 52.55 2 -0.7320499585262765 0.22594984859107656 1.0 ['ENST00000318430.9_1_17:76134666-76137438:+|nuORF'] 61046 22506 LIFRYLQNRSR True PC9_epitope_Rep2 1464.8313654821197 1464.83026993586 92.059 2 -0.7320644582001851 0.22594984859107656 1.0 ['ENSG00000182004|ENST00000414487|SNRPE'] 108389 18647 SYLESFYHM-[Oxidation] True PC9_epitope_Rep5 1191.49066130687 1191.4895699358601 76.75 2 -0.7320767093467649 0.22594984859107656 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 30596 13319 GAIQIRDVSL True PC9_epitope_Rep3 1070.60840799034 1070.60730993586 56.265 2 -0.7320992396091938 0.22597631194248038 1.0 ['ENST00000591991.1_1_19:5667238-5667808:+|nuORF'] 126491 23623 VLLKQLLLLLE True NCI_RA007_Epitope_Rep4 1293.86356004385 1293.86191490379 102.47 3 -0.7321330788262811 0.22601431980906922 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|358|2|anti-sense'] 136535 20042 WWDIYYTLFEK True PC9_epitope_Rep4 1562.7445671099797 1562.74346993586 85.228 2 -0.7321405971705023 0.22601431980906922 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 129629 15845 VRPGHGKG True NCI_RA007_Epitope_Rep2 806.4511195033 806.45002993586 66.348 2 -0.7323002952178976 0.226040781014603 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 79942 16987 PESCPRGCPP True PC9_epitope_Rep1 1041.43718588493 1041.43608993586 70.163 2 -0.7324150661111735 0.22608215745353658 1.0 ['nc|ENSG00000135409|Q16671-3|AMHR2', 'ENSG00000135409|ENST00000257863|AMHR2'] 122876 4514 VGHLRVRRFWS True H1975_Epitope_Rep1 1411.79492040375 1411.79326490379 22.385 3 -0.7324774343447914 0.2261086168578375 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 20298 8268 ENTGVDVF True NCI_RA007_Epitope_Rep5 879.3974121645899 879.39686496793 38.481 1 -0.7325053775672544 0.22611678723245582 1.0 ['ENSG00000168421|ENST00000381799|RHOH'] 136401 20895 WTRRRRRQPRR True PC9_epitope_Rep6 1622.9566746212997 1622.95556993586 93.144 2 -0.7325453549071658 0.22611678723245582 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 94796 17258 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 73.157 2 -0.7325570782323025 0.22613987203006847 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 77810 13121 NVALFFSF True NCI_RA007_Epitope_Rep5 943.4803539429099 943.47924993586 57.147 2 -0.7325639053748659 0.22613987203006847 1.0 ['ENST00000548590.1_1_12:56436718-56436841:+|nuORF'] 93898 24545 RRFLLRRA True PC9_epitope_Rep4 1086.6886644300598 1086.6875699358602 102.9 2 -0.732578381068095 0.22615141391242094 1.0 ['MDGA2|p.G334Dfs*22|2|0.16|ENSG00000139915|chr14:47061568-47061568|T/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2'] 107393 13191 SVLLSASKIL True PC9_epitope_Rep5 1029.64339651673 1029.6422899358602 55.744 2 -0.7325873821639596 0.22615958240119313 1.0 ['nc|ENSG00000168491|Q8TBZ0-2|CCDC110', 'ENSG00000168491|ENST00000307588|CCDC110'] 33083 6011 GINYREWYK True NCI_RA007_Epitope_Rep1 1227.6036569630699 1227.60254993586 27.426 2 -0.7326014308799558 0.22615958240119313 1.0 ['KCNK10|p.E467Rfs*38|1|0.38|ENSG00000100433|chr14:88185754-88185754|G/-|frameshift_variant', 'nc|ENSG00000100433|P57789|KCNK10', 'nc|ENSG00000100433|P57789-4|KCNK10', 'ENSG00000100433|ENST00000319231|KCNK10'] 59307 13573 LFHNNKTWNLK True H1975_Epitope_Rep3 1413.7517181790897 1413.7506299358602 57.492 2 -0.7326750424364967 0.22623077955586046 1.0 ['nc|ENSG00000198105|Q8NDW4-2|ZNF248'] 142007 10 YVKLLSKTPEL True NCI_RA007_Epitope_Rep1 1289.75948889813 1289.75785490379 0.04265 3 -0.7327007324802858 0.22624231939390324 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'ENST00000503126.1_1_5:179133324-179137021:+|nuORF', 'nc|ENSG00000127022|P27824-3|CANX'] 95285 25524 RVPVGGGP True H1975_Epitope_Rep1 737.41842239269 737.4178749679301 105.78 1 -0.7327622465918068 0.2262687724635736 1.0 ['ENSG00000236104|ENST00000431845|ZBTB22'] 33871 5519 GLPRGAYR True NCI_RA007_Epitope_Rep4 888.49298431528 888.49188993586 27.823 2 -0.7328072528514624 0.22627693684289016 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 71630 14856 MDQLVFLL True NCI_RA007_Epitope_Rep4 977.5255898831699 977.52448993586 64.606 2 -0.7328190638167521 0.22627693684289016 1.0 ['ENST00000553077.5_1_16:68224994-68225093:+|nuORF'] 6050 4842 APLKGNCTHH True H1975_Epitope_Rep1 1076.51854744012 1076.5174499358602 23.701 2 -0.7328804343417675 0.22633321403006443 1.0 ['DRD2|p.P247H|1|0.15|ENSG00000149295|chr11:113414445-113414445|G/T|missense_variant'] 18066 11136 EIGLQHNRI True NCI_RA007_Epitope_Rep1 1078.5883412521002 1078.5872499358602 47.317 2 -0.7329098469085644 0.2263447514800841 1.0 ['LGR6|p.E637Rfs*4|1|0.12|ENSG00000133067|chr1:202318210-202318210|G/-|frameshift_variant', 'nc|ENSG00000133067|Q9HBX8-1|LGR6', 'LGR6|p.P889Lfs*11|1|0.17|ENSG00000133067|chr1:202318963-202318963|G/-|frameshift_variant', 'nc|ENSG00000133067|Q9HBX8-2|LGR6', 'ENSG00000133067|ENST00000367278|LGR6'] 23921 6837 EYLEKEKLKKE True PC9_epitope_Rep2 1435.7922455783898 1435.79059490379 31.703 3 -0.7330037589017538 0.22635628858600018 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 10194 16358 AYYQALSAER True PC9_epitope_Rep2 1170.5669371011797 1170.5658499358601 68.166 2 -0.7330207375446658 0.22638273758928704 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'ENST00000489156.1_1_6:152599163-152623219:-|nuORF'] 29078 10313 FTIAAKHHIT True NCI_RA007_Epitope_Rep5 1137.62947778809 1137.62782490379 46.299 3 -0.7330275037846764 0.22639427378467045 1.0 ['ENSG00000125814|ENST00000377026|NAPB', 'nc|ENSG00000125814|Q9H115-2|NAPB', 'nc|ENSG00000125814|Q9H115-3|NAPB'] 102334 5207 SLSSPWEQDHR True NCI_RA007_Epitope_Rep1 1340.61092717148 1340.60929490379 24.337 3 -0.733086296177512 0.2264288803065774 1.0 ['ENST00000451540.1_1_13:75812162-75812900:-|nuORF'] 13682 5918 DPRSQLQQFSH True H1975_Epitope_Rep1 1341.64256165293 1341.6414699358602 27.835 2 -0.7331624863858437 0.2264288803065774 1.0 ['ENSG00000130749|ENST00000253048|ZC3H4'] 23378 10352 EVRTAPWNT True H1975_Epitope_Rep2 1072.53015766964 1072.5290699358602 44.827 2 -0.7331749862891348 0.2264288803065774 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 65289 11983 LQYLERLYMKR True H1975_Epitope_Rep1 1511.8282542476297 1511.82714993586 51.099 2 -0.7332305909495664 0.2264702373851843 1.0 ['ENST00000560213.1_1_15:99796138-99796378:+|nuORF', 'ENST00000558500.5_1_15:99796138-99837514:+|nuORF', 'nc|ENSG00000168904|Q86X40-2|LRRC28', 'ENSG00000168904|ENST00000301981|LRRC28'] 13577 8293 DPEFSGKSY True H1975_Epitope_Rep2 1028.4450906329998 1028.4439899358601 36.85 2 -0.733289981716037 0.22649668232311937 1.0 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1'] 79623 9044 PDLVEINR True H1975_Epitope_Rep1 954.51344497634 954.51234993586 39.694 2 -0.7333006462622552 0.22652312647243014 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 82280 4767 PPGPGGGTL True NCI_RA007_Epitope_Rep3 751.38645355807 751.38534993586 25.714 2 -0.7333380203697336 0.22653465937048026 1.0 ['ENST00000430109.1_1_1:1369598-1369895:-|nuORF'] 124333 12317 VGTRGTLL True PC9_epitope_Rep5 815.4865019525099 815.48540993586 52.368 2 -0.7333706991100167 0.22654619192461384 1.0 ['nc|ENSG00000183060|Q5XG99-2|LYSMD4'] 93569 6157 RQLREYQEL True NCI_RA007_Epitope_Rep4 1233.6465844042098 1233.64492490379 30.294 3 -0.7334346770060014 0.22657263415288734 1.0 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9NSB2', 'CON__H-INV:HIT000292931'] 38356 19275 HEIILKAAQE True PC9_epitope_Rep6 1150.6346227381798 1150.63352993586 86.788 2 -0.7334834923031299 0.22658416579692858 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 45005 9861 IPDKEAGGVP True H1975_Epitope_Rep2 981.5131106231697 981.51200993586 42.917 2 -0.7335171785344613 0.22659231870229007 1.0 ['ENST00000602865.1_1_1:2282646-2283036:-|nuORF'] 9957 12706 AYNDVGKTSAY True H1975_Epitope_Rep1 1187.54586730343 1187.5447699358601 53.93 2 -0.7335240620970437 0.22659231870229007 1.0 ['ENSG00000157404|ENST00000288135|KIT', 'nc|ENSG00000157404|P10721-2|KIT'] 69180 6960 LTSDNDRLR True NCI_RA007_Epitope_Rep2 1088.55743504664 1088.55632993586 31.694 2 -0.7335691869738593 0.22664519784119033 1.0 ['nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA', 'nc|ENSG00000245848|P49715-3|CEBPA'] 71412 9171 LYSVLYMSSL True PC9_epitope_Rep5 1174.59439771898 1174.5933099358601 40.223 2 -0.7335745653848165 0.22664519784119033 1.0 ['ENSG00000170961|ENST00000303924|HAS2'] 23672 14588 EYDAVAEKAGK True H1975_Epitope_Rep3 1179.57716743171 1179.57606993586 61.481 2 -0.7336461140776209 0.22665672754379426 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 23371 18573 EVRRAVLSCI True PC9_epitope_Rep6 1144.6386625727998 1144.63756993586 84.082 2 -0.7337366670365527 0.22669946332737032 1.0 ['ENSG00000109805|ENST00000251496|NCAPG'] 12567 6446 DKSVVLYWKWL True PC9_epitope_Rep2 1435.7863723523096 1435.78471490379 30.208 3 -0.7337455523911612 0.22669946332737032 1.0 ['ENST00000245046.6_1_3:10004387-10004693:-|nuORF'] 140227 10252 YQYHWQSH True PC9_epitope_Rep2 1147.48354183039 1147.4818949037901 44.767 3 -0.7337693293916124 0.22669946332737032 1.0 ['ENSG00000157483|ENST00000288235|MYO1E', 'ENST00000558646.1_1_15:59564474-59664765:-|nuORF'] 84597 12545 QCWNTLEFFI True H1975_Epitope_Rep3 1299.5957947013098 1299.59413490379 53.453 3 -0.7337773882942782 0.22669946332737032 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 60478 10435 LGYLYRKFWFK True PC9_epitope_Rep3 1519.8339912510698 1519.83177987172 45.077 4 -0.7337774618243632 0.22669946332737032 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 82027 17101 PLVSQSQPV True PC9_epitope_Rep6 953.5181960036099 953.51708993586 78.354 2 -0.7338419512103359 0.2267076115798575 1.0 ['EXT1|p.K730Tfs*15|1|0.1|ENSG00000182197|chr8:117799764-117799765|-/G|frameshift_variant', 'ENSG00000182197|ENST00000378204|EXT1'] 91365 8080 RHCMQLWR True PC9_epitope_Rep5 1128.5433227193198 1128.54166490379 36.018 3 -0.7338452071486034 0.2267076115798575 1.0 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'OGT|p.L354Sfs*34|1|0.06|ENSG00000147162|chrX:71556089-71556090|-/CCACTGA|frameshift_variant', 'ENST00000472270.1_1_X:70752999-70756209:+|nuORF', 'ENST00000488174.5_1_X:70752999-70764494:+|nuORF'] 71708 4444 MEEKPHQWSA True H1975_Epitope_Rep2 1241.54990713805 1241.5482749037901 22.205 3 -0.7340198562066245 0.2268085804153064 1.0 ['ENSG00000181315|ENST00000415922|ZNF322'] 47166 7221 ITWGGQNI True PC9_epitope_Rep5 887.4501164437899 887.44900993586 32.74 2 -0.7340390309578366 0.2268167250503093 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 27768 8651 FPVLWHLWIY True PC9_epitope_Rep5 1372.73321458064 1372.73155490379 38.219 3 -0.7340469909250619 0.2268167250503093 1.0 ['nc|ENSG00000101464|Q9H490-2|PIGU', 'ENSG00000101464|ENST00000217446|PIGU'] 60691 3423 LHNRAEDWEVK True NCI_RA007_Epitope_Rep2 1395.6895118453501 1395.68785490379 17.971 3 -0.7340723960137543 0.22682963183782978 1.0 ['ENSG00000174799|ENST00000257287|CEP135'] 106634 8134 STSESKPPP True H1975_Epitope_Rep2 928.4501760134399 928.44906993586 36.237 2 -0.7340796415727575 0.22682963183782978 1.0 ['nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7'] 117371 19640 TVPISTGLP True PC9_epitope_Rep1 883.5014833103099 883.5009349679301 80.37 1 -0.7340851370892043 0.22682963183782978 1.0 ['ENST00000252445.7_1_19:11663878-11664130:-|nuORF'] 34398 11928 GPGRASLTL True PC9_epitope_Rep3 870.49231560894 870.49120993586 50.902 2 -0.734101243445135 0.22682963183782978 1.0 ['ENST00000361658.6_1_17:19770872-19771034:-|nuORF'] 61666 22626 LKRRIWRMPLF True PC9_epitope_Rep6 1514.9020283245798 1514.9003849037902 100.07 3 -0.7341179794202213 0.22682963183782978 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 39786 10050 HMCLELTVWD True H1975_Epitope_Rep2 1245.5522156371699 1245.55110993586 43.649 2 -0.7341357425414974 0.22684929873459228 1.0 ['ENSG00000102362|ENST00000372989|SYTL4'] 61664 24558 LKRRIWRMPLF True PC9_epitope_Rep2 1514.9020283245798 1514.9003849037902 100.08 3 -0.7341587713651746 0.22684929873459228 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 129488 24993 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 108.78 2 -0.7341736077828412 0.22684929873459228 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 79009 5431 PALAGPPAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 26.283 2 -0.7342025480071256 0.22686082213014577 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 89097 14710 QVPENYFY True H1975_Epitope_Rep3 1058.4709114580198 1058.4698099358602 61.954 2 -0.7343130178355421 0.22686896387266006 1.0 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENST00000538033.2_1_2:114353729-114354265:+|nuORF', 'ENST00000482170.6_1_X:155252010-155252984:+|nuORF', 'ENSG00000181404|ENST00000696149|WASHC1', 'ENST00000461007.6_1_X:155252382-155252984:+|nuORF'] 30734 9367 GALKEKYL True H1975_Epitope_Rep2 920.5331177917599 920.53202993586 40.992 2 -0.7343190516154844 0.22686896387266006 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-4|PRDM16'] 7619 15267 ASGDTLYIAT True PC9_epitope_Rep5 1010.49204082542 1010.49147496793 63.734 1 -0.7343865874180547 0.22692181585144117 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 14373 7297 DTAQIENKEAY True H1975_Epitope_Rep3 1280.5884603914 1280.5873699358601 33.042 2 -0.7344062281029815 0.22692181585144117 1.0 ['ENSG00000166398|ENST00000299505|GARRE1'] 113363 21173 TLRSSSLSLIL True PC9_epitope_Rep4 1188.70778767844 1188.7061549037899 89.606 3 -0.7344288186731762 0.22694824065932429 1.0 ['ENST00000475242.5_1_20:43991907-44037103:+|nuORF'] 16163 9729 EEDLDYYL True PC9_epitope_Rep4 1058.44442192666 1058.4433299358602 45.061 2 -0.7344363051489162 0.22695976154992548 1.0 ['nc|ENSG00000146063|Q8WV44-4|TRIM41', 'ENST00000508930.1_1_5:180650987-180660460:+|nuORF', 'nc|ENSG00000146063|Q8WV44-2|TRIM41', 'ENSG00000146063|ENST00000315073|TRIM41'] 94496 23695 RRRRRRSRERR True PC9_epitope_Rep5 1638.9951853883397 1638.9935249037903 96.121 3 -0.7344913188095108 0.22699770498643856 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 118804 13454 VAAFHVCR True PC9_epitope_Rep5 901.4592416588499 901.45814993586 56.767 2 -0.734492562935645 0.22699770498643856 1.0 ['SAMD3|p.F476C|1|0.03|ENSG00000164483|chr6:130144656-130144656|A/C|missense_variant'] 117828 7624 TVYDFWRMIWQ True NCI_RA007_Epitope_Rep2 1543.7282058531898 1543.72654490379 34.28 3 -0.7345410066107219 0.22700584167858845 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 107176 16315 SVIKNLVIP True PC9_epitope_Rep6 981.6222671493299 981.6211699358599 75.121 2 -0.734544740627879 0.22700584167858845 1.0 ['ENST00000216185.6_1_22:36863238-36863490:-|nuORF'] 37859 19213 GYMEGYYTF True PC9_epitope_Rep6 1129.44264810485 1129.44207496793 86.555 1 -0.7345637870856904 0.2270322628716191 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 56379 14224 LDDSALYLSDK True PC9_epitope_Rep3 1238.60304782638 1238.6019499358601 59.798 2 -0.7345826361843963 0.2270403981700866 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 26084 17308 FGNSWEEVV True PC9_epitope_Rep4 1065.47672511445 1065.47562993586 74.577 2 -0.7345853608248296 0.2270403981700866 1.0 ['ENSG00000275395|ENST00000616721|FCGBP', 'nc|ENSG00000275395|Q9Y6R7|FCGBP', 'FCGBP|p.A1971Tfs*9|1|0.06|ENSG00000275395|chr19:39893456-39893457|CA/-|frameshift_variant', 'FCGBP|p.G2617Afs*69|1|0.11|ENSG00000275395|chr19:39886329-39886329|C/-|frameshift_variant'] 109578 6451 TDVVPEVESP True NCI_RA007_Epitope_Rep5 1070.5131701928199 1070.5120699358602 31.48 2 -0.7346279184609941 0.227045149754135 1.0 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4'] 79796 5354 PEELQVSSPPP True NCI_RA007_Epitope_Rep2 1178.58191845898 1178.58028490379 25.444 3 -0.7347101199393616 0.227045149754135 1.0 ['ENSG00000205208|ENST00000379205|C4orf46'] 19487 14800 ELPDNHSSL True PC9_epitope_Rep1 1010.4668887067401 1010.46578993586 61.748 2 -0.7347135670574422 0.227045149754135 1.0 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'nc|ENSG00000054116|O43617-2|TRAPPC3', 'ENST00000462715.1_1_1:36603336-36605749:-|nuORF'] 13734 4162 DQAFGDWLL True H1975_Epitope_Rep2 1063.4974605590298 1063.49636993586 21.11 2 -0.7347337592650793 0.2270499009133849 1.0 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 107865 9160 SVVIIPFAI True NCI_RA007_Epitope_Rep5 957.58990439189 957.58880993586 41.884 2 -0.7347369902840197 0.2270499009133849 1.0 ['nc|ENSG00000242019|Q8N743|KIR3DL3', 'ENSG00000242019|ENST00000291860|KIR3DL3'] 17219 8761 EGVVEC[Carbamidomethyl]SFVK True NCI_RA007_Epitope_Rep2 1152.5485104351499 1152.54740993586 38.723 2 -0.7347678304649148 0.2270499009133849 1.0 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 19871 9156 ELTHNNKTV True PC9_epitope_Rep3 1054.54072235334 1054.5396299358601 40.159 2 -0.734866943007637 0.2270546516478932 1.0 ['ENSG00000156162|ENST00000414645|DPY19L4'] 61577 24077 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 99.139 3 -0.7348850375325156 0.2270546516478932 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 117218 16303 TVLMLADQ True PC9_epitope_Rep4 889.4579042461698 889.45680993586 70.67 2 -0.7349510432043322 0.2270546516478932 1.0 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 102444 20960 SLTSRLWPR True PC9_epitope_Rep5 1114.6247267608198 1114.6236299358602 85.682 2 -0.7349666568128109 0.22706616803492408 1.0 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 121444 6822 VEWMQDFEAF True NCI_RA007_Epitope_Rep1 1300.5434247752798 1300.5423299358602 30.543 2 -0.7349844802855687 0.2270925832116571 1.0 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'nc|ENSG00000198522|Q9HCN4-2|GPN1', 'nc|ENSG00000198522|Q9HCN4-3|GPN1'] 100590 12220 SLCNHLKKLV True H1975_Epitope_Rep1 1153.66414904465 1153.66304993586 52.025 2 -0.7349882816728623 0.22710409869038573 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10'] 64136 11068 LPERVAAAA True PC9_epitope_Rep1 896.5079656730798 896.50686993586 47.461 2 -0.7350916503691318 0.22713187533520052 1.0 ['ENST00000295156.8_1_2:17721951-17722035:+|nuORF'] 12976 24017 DLLPLSLIPV True PC9_epitope_Rep1 1078.66379760814 1078.66327496793 97.19 1 -0.7350931191467097 0.22713187533520052 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2'] 58379 5972 LENLSTASS True H1975_Epitope_Rep2 920.4450906330001 920.44398993586 27.95 2 -0.7351183169478204 0.22713187533520052 1.0 ['RASAL2|p.Q869Rfs*10|1|0.08|ENSG00000075391|chr1:178458318-178458318|C/-|frameshift_variant', 'ENSG00000075391|ENST00000367649|RASAL2', 'nc|ENSG00000075391|Q9UJF2|RASAL2'] 73859 12775 NAQFKSLV True PC9_epitope_Rep3 905.4970666362099 905.49596993586 54.159 2 -0.7351617561407163 0.22713187533520052 1.0 ['nc|ENSG00000213619|O75489-2|NDUFS3', 'ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'ENSG00000213619|ENST00000263774|NDUFS3'] 140483 7821 YRKMKERL True NCI_RA007_Epitope_Rep4 1122.6331832695398 1122.6315449037902 36.773 3 -0.7351669008461452 0.22713187533520052 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 132308 7588 VTYFWRFKLFL True H1975_Epitope_Rep1 1518.8387422783396 1518.83710490379 34.179 3 -0.7352058070004475 0.2271731843575419 1.0 ['ENSG00000125484|ENST00000372146|GTF3C4'] 46900 14803 ITLSYQEQEL True PC9_epitope_Rep2 1222.60813320682 1222.60648490379 62.205 3 -0.7352548460679341 0.22721449214909276 1.0 ['ENSG00000042429|ENST00000251871|MED17', 'MED17|p.C601*|1|0.39|ENSG00000042429|chr11:93811909-93811910|TG/-|frameshift_variant'] 78705 4649 PAAAAAAAPD True PC9_epitope_Rep4 824.4028318981999 824.40172993586 24.403 2 -0.7352657960477578 0.22722600443934632 1.0 ['ENST00000246006.4_1_20:23066758-23066941:-|nuORF'] 55144 18752 LAAFWYYT True PC9_epitope_Rep6 1033.49091862661 1033.4898299358601 84.77 2 -0.7352800252488269 0.2272307463131238 1.0 ['ENSG00000249222|ENST00000505920|ATP5MGL'] 69706 18942 LVEFYEEIK True H1975_Epitope_Rep1 1168.6015912743999 1168.6004899358602 78.978 2 -0.7352929951867333 0.2272307463131238 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67044605-67048428:+|nuORF'] 11312 12360 DEKEYPHRR True PC9_epitope_Rep6 1228.5948831845199 1228.59378993586 58.946 2 -0.7352941395573572 0.2272307463131238 1.0 ['ENSG00000070501|ENST00000265421|POLB'] 86056 6119 QHRQRWRL True PC9_epitope_Rep1 1178.6533415504998 1178.65168490379 28.351 3 -0.7353385562424349 0.22728356074599296 1.0 ['ENST00000473262.5_1_3:124837626-124909342:-|nuORF'] 136187 17510 WRRRRRPQ True NCI_RA007_Epitope_Rep5 1209.7067741056899 1209.70513490379 74.143 3 -0.7353510181427133 0.22728356074599296 1.0 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 65990 8154 LSDYSRSDASS True NCI_RA007_Epitope_Rep5 1186.5102100707 1186.5091099358601 38.047 2 -0.7355506547468832 0.2274372532955984 1.0 ['ENSG00000169926|ENST00000307145|KLF13'] 132594 11528 VVEWDKETRDF True NCI_RA007_Epitope_Rep5 1422.6779441021397 1422.6768499358602 50.994 2 -0.7355539590642269 0.2274372532955984 1.0 ['ENSG00000103404|ENST00000219689|USP31'] 94484 13735 RRRRRRPPPRR True NCI_RA007_Epitope_Rep5 1557.9777444190497 1557.97609490379 59.516 3 -0.7355745558673219 0.2274372532955984 1.0 ['ENST00000533683.6_2_19:14201006-14201489:-|nuORF'] 27540 10048 FNDGNAAVV True PC9_epitope_Rep4 905.4242956187699 905.42374496793 46.315 1 -0.7356910883611678 0.2274534920091154 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 122759 20651 VGGLSPLSSP True PC9_epitope_Rep2 912.4916469026001 912.49054993586 84.87 2 -0.7357525608594067 0.2274534920091154 1.0 ['ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1'] 31502 8912 GEDCVVMIW True H1975_Epitope_Rep1 1050.45143896674 1050.45034993586 39.183 2 -0.7357622855006279 0.2274534920091154 1.0 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 125695 22808 VKNYFYYYLFQ True H1975_Epitope_Rep1 1546.7496524904197 1546.7485499358602 94.862 2 -0.7357697034573172 0.2274534920091154 1.0 ['ENSG00000163082|ENST00000321276|SGPP2'] 124985 19911 VHVRRHKG True NCI_RA007_Epitope_Rep2 987.58386500835 987.58276993586 82.45 2 -0.7357863050783774 0.2274616106402943 1.0 ['ENSG00000204859|ENST00000377674|ZBTB48', 'ENST00000498342.5_1_1:6648784-6649012:+|nuORF', 'ENST00000466941.1_1_1:6648784-6649269:+|nuORF'] 141194 9800 YSWKKNRMWRK True H1975_Epitope_Rep2 1581.83507096357 1581.83396993586 42.682 2 -0.7358078861074518 0.2274616106402943 1.0 ['ENSG00000080618|ENST00000181383|CPB2'] 72476 14405 MLAVAALY True H1975_Epitope_Rep2 850.4622613506201 850.46116993586 60.558 2 -0.7358352059307917 0.22748801048524023 1.0 ['ENSG00000128310|ENST00000249041|GALR3'] 4075 19680 AHLLSWFSP True NCI_RA007_Epitope_Rep4 1056.53926580136 1056.5381699358602 85.047 2 -0.7358443783333295 0.22749612772548553 1.0 ['ENSG00000172893|ENST00000355527|DHCR7'] 58004 19452 LEHGLYGEGF True PC9_epitope_Rep5 1120.5189242795998 1120.5178299358602 79.872 2 -0.7358605401666677 0.22749612772548553 1.0 ['ENST00000403633.6_1_7:99017160-99017205:+|nuORF'] 70615 25759 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 106.61 3 -0.7358954178503244 0.22750424448217318 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 119062 8560 VAGGGGGFGAA True PC9_epitope_Rep3 819.38751618723 819.38640993586 37.879 2 -0.735906342585204 0.22750424448217318 1.0 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 137599 7974 YEERWQWHRLQ True PC9_epitope_Rep6 1629.7800581852498 1629.77842490379 40.131 3 -0.7359736092926805 0.22754553442447167 1.0 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant'] 30713 5092 GALGNRPFR True NCI_RA007_Epitope_Rep3 986.5409971368599 986.53990993586 27.021 2 -0.7361601080470218 0.2276281106196667 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 36718 24820 GVIYRLLYQR True PC9_epitope_Rep2 1279.7400908662298 1279.73957496793 101.17 1 -0.736162798296238 0.2276281106196667 1.0 ['ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 66402 8204 LSGLEAPSLQK True H1975_Epitope_Rep1 1141.63428838501 1141.6331899358602 36.499 2 -0.7361765003372136 0.2276328329759352 1.0 ['ENSG00000260734|ENST00000561754|TLE7'] 63856 22083 LNLLEMEY True PC9_epitope_Rep1 1023.4946836777099 1023.4935899358601 89.754 2 -0.7361829151158008 0.2276328329759352 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF', 'nc|ENSG00000185246|Q86UA1-2|PRPF39', 'ENST00000554785.1_1_14:45579308-45583868:+|nuORF'] 1065 4446 AEAGRNVMVP True H1975_Epitope_Rep2 1042.52296411422 1042.5218699358602 22.212 2 -0.7361881274292627 0.2276328329759352 1.0 ['ENSG00000103657|ENST00000443617|HERC1'] 18289 11270 EIRNKNSYMK True H1975_Epitope_Rep1 1281.6499555324901 1281.6488499358602 48.327 2 -0.7362153241081639 0.2276443345792444 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49', 'ENST00000561131.2_1_15:71341123-71341948:+|nuORF', 'nc|ENSG00000137821|Q8IUZ0-3|LRRC49', 'ENSG00000137821|ENST00000260382|LRRC49', 'nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 131769 11524 VTPSAVTPSA True H1975_Epitope_Rep2 928.4865615221601 928.48546993586 49.385 2 -0.7362344523110348 0.22765244583426403 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 136513 25382 WVVRLGGRG True PC9_epitope_Rep3 998.5773826455797 998.57628993586 103.05 2 -0.7362599530261805 0.22765244583426403 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 80610 11266 PGQWIIC[Carbamidomethyl]VEGD True H1975_Epitope_Rep1 1272.5808731925897 1272.5797699358602 48.311 2 -0.7363215626837182 0.22766394663172315 1.0 ['nc|ENSG00000131373|Q9UJ83-3|HACL1', 'nc|ENSG00000131373|Q9UJ83-4|HACL1', 'nc|ENSG00000131373|Q9UJ83-2|HACL1', 'ENSG00000131373|ENST00000321169|HACL1'] 109175 7564 TANCMSSQTK True NCI_RA007_Epitope_Rep1 1069.45322987189 1069.45212993586 33.414 2 -0.7363260915744222 0.22767544708667747 1.0 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 114353 10049 TPSATAVPP True H1975_Epitope_Rep2 839.4388830537499 839.43833496793 43.645 1 -0.736375937041119 0.22768355693205677 1.0 ['ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 46421 6282 ISSSLTPQ True NCI_RA007_Epitope_Rep5 831.43379767331 831.43270993586 30.842 2 -0.7363848341863133 0.22768355693205677 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'ENST00000503896.6_1_5:123979291-124080034:-|nuORF'] 25426 4233 FEDPQRREVA True H1975_Epitope_Rep2 1245.6101988954902 1245.60856490379 21.393 3 -0.7364053256359775 0.22770994639666467 1.0 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 123731 7033 VGRGGKSR True PC9_epitope_Rep5 815.47258322387 815.47148993586 32.021 2 -0.7364211583709873 0.2277214454817528 1.0 ['ENST00000253251.12_1_1:10093057-10093417:+|nuORF'] 25625 11739 FENLDQQLR True H1975_Epitope_Rep3 1161.5778361380499 1161.5767299358602 50.297 2 -0.7364484211838879 0.2277478335963789 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 15404 19272 EAISYVREKTK True H1975_Epitope_Rep1 1322.7194149913 1322.7183099358601 80.298 2 -0.7365480528865112 0.2278039992257642 1.0 ['ENSG00000138031|ENST00000679454|ADCY3', 'nc|ENSG00000138031|O60266-2|ADCY3'] 42690 9141 IEISKLTDKVQ True NCI_RA007_Epitope_Rep2 1272.72891704584 1272.7278299358602 40.163 2 -0.7365724308362226 0.22781549639687929 1.0 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'ENSG00000134313|ENST00000256707|KIDINS220', 'nc|ENSG00000134313|Q9ULH0-2|KIDINS220', 'ENST00000488729.5_1_2:8870852-8965899:-|nuORF', 'nc|ENSG00000134313|Q9ULH0-5|KIDINS220'] 81811 13100 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 55.257 2 -0.7366047932963 0.22784188193255417 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 7650 17128 ASIGPLTGV True PC9_epitope_Rep6 813.45961849833 813.45852993586 78.466 2 -0.7366380222286656 0.22786826668254773 1.0 ['nc|ENSG00000112659|Q8IWT3-3|CUL9', 'ENSG00000112659|ENST00000252050|CUL9', 'ENST00000451399.5_1_6:43152048-43155921:+|nuORF', 'ENST00000515773.5_1_6:43152048-43164205:+|nuORF'] 18637 15210 EKVLDEFSKQ True PC9_epitope_Rep1 1221.62411762413 1221.6230299358601 63.326 2 -0.7366761961848124 0.22787636969985708 1.0 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6'] 5655 14205 APAAVVVAP True PC9_epitope_Rep4 793.4697892592098 793.46868993586 62.548 2 -0.7366899837123424 0.22787636969985708 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 39674 7534 HLRAYHRCLYY True NCI_RA007_Epitope_Rep1 1493.73502256913 1493.73337490379 33.298 3 -0.7367342071968372 0.2279019917234809 1.0 ['ENSG00000161921|ENST00000293778|CXCL16'] 113626 10372 TLVTNTEI True PC9_epitope_Rep1 889.4756624852901 889.47456993586 44.78 2 -0.7367352176403882 0.2279019917234809 1.0 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant'] 65667 10755 LSAPQKPQL True PC9_epitope_Rep1 980.5654805492 980.56438993586 46.257 2 -0.7367722035740488 0.2279019917234809 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 94802 20021 RSPRGILG True PC9_epitope_Rep6 854.5086343794198 854.50752993586 89.678 2 -0.736775566321713 0.2279019917234809 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 35325 23481 GRRGKCLK True PC9_epitope_Rep6 916.5388889618799 916.53834496793 103.43 1 -0.7367789126173658 0.2279019917234809 1.0 ['ENST00000409088.3_1_2:77745377-77745434:-|nuORF'] 91567 6543 RIIPRHLQL True NCI_RA007_Epitope_Rep5 1144.719295852 1144.7176649037901 31.83 3 -0.7367831647361015 0.2279019917234809 1.0 ['ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 9711 14363 AYGLVSATF True NCI_RA007_Epitope_Rep3 927.47018318203 927.46963496793 63.808 1 -0.7367843575994398 0.2279019917234809 1.0 ['ENSG00000156875|ENST00000370152|MFSD14A'] 25016 3185 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 16.28 2 -0.7368133149462683 0.2279019917234809 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 52400 7819 KKNHQEYYFWY True NCI_RA007_Epitope_Rep1 1604.7412130650398 1604.7395549037901 34.405 3 -0.7368186963937473 0.2279019917234809 1.0 ['ENST00000521988.5_2_8:93966716-93978353:-|nuORF', 'ENST00000519969.5_2_8:93966716-93977788:-|nuORF', 'ENST00000524107.5_2_8:93966716-93978097:-|nuORF'] 11426 4745 DEVVLVEGP True H1975_Epitope_Rep3 955.4862271689898 955.48512993586 23.378 2 -0.7368498944494596 0.2279019917234809 1.0 ['ENSG00000176953|ENST00000320805|NFATC2IP'] 125366 22188 VIREPITV True PC9_epitope_Rep1 925.5596668927699 925.55856993586 90.166 2 -0.7369564500618364 0.22791009228937184 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 27277 16531 FLQKENNNTI True PC9_epitope_Rep2 1219.61970095003 1219.6186099358601 68.826 2 -0.7369630713510017 0.22791009228937184 1.0 ['nc|ENSG00000255298|Q8NG78|OR8G5'] 55262 14993 LADMIVEEEVP True PC9_epitope_Rep1 1243.60060529823 1243.5995099358602 62.49 2 -0.7369879600220621 0.22793647013292448 1.0 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A'] 13171 9249 DLRSGDKL True PC9_epitope_Rep1 902.4821448480599 902.48104993586 40.428 2 -0.7370320575050388 0.22797094546320554 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.V841Cfs*5|1|0.1|ENSG00000155897|chr8:130836431-130836431|C/-|frameshift_variant'] 67836 9464 LTAIPFWYHM True PC9_epitope_Rep6 1277.62670090677 1277.6256099358602 46.643 2 -0.7370728024262347 0.22797094546320554 1.0 ['nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 107879 13134 SVVLEKAKVV True PC9_epitope_Rep4 1070.66994561774 1070.6688499358602 58.414 2 -0.7370790713888796 0.22797094546320554 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 56780 15494 LDLWEFFCRKK True NCI_RA007_Epitope_Rep2 1483.7645913619097 1483.7634899358602 64.972 2 -0.7371847169957377 0.22799732083054253 1.0 ['nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'ENST00000476985.5_1_12:3921210-3931106:-|nuORF', 'nc|ENSG00000111224|Q9NR21-2|PARP11'] 25117 1806 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 10.124 2 -0.7372563471481484 0.2279986307282442 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 127029 12782 VLSHEFVL True PC9_epitope_Rep4 942.51746772762 942.51636993586 57.028 2 -0.737296464616528 0.2279986307282442 1.0 ['ENSG00000067167|ENST00000262213|TRAM1', 'ENST00000521049.5_1_8:71510241-71520545:-|nuORF'] 103440 3029 SPPRRARHGS True NCI_RA007_Epitope_Rep1 1119.6009716244698 1119.5998699358602 15.657 2 -0.7373534328198474 0.2279986307282442 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 136511 25496 WVVRLGGRG True PC9_epitope_Rep3 998.5773826455797 998.57628993586 103.53 2 -0.7373864614798706 0.2279986307282442 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 1564 8385 AEESDSSK True PC9_epitope_Rep3 851.35085589499 851.34974993586 37.22 2 -0.7374082095106846 0.22800672709142594 1.0 ['ENST00000537175.1_1_12:16552211-16552709:-|nuORF'] 7901 6975 ATALASDP True NCI_RA007_Epitope_Rep5 744.36538376032 744.36483496793 33.512 1 -0.7374248803092139 0.22800672709142594 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'nc|ENSG00000067182|P19438-3|TNFRSF1A', 'ENST00000536717.5_1_12:6438480-6440154:-|nuORF', 'nc|ENSG00000067182|P19438-2|TNFRSF1A'] 69738 16993 LVEWRQRK True NCI_RA007_Epitope_Rep2 1113.6407111781298 1113.63960993586 70.835 2 -0.737442172910548 0.2280297054752727 1.0 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 43933 21971 IIDFWKMWQ True PC9_epitope_Rep2 1265.6267009067699 1265.6256099358602 89.988 2 -0.7374572890323693 0.2280297054752727 1.0 ['ENST00000370574.3_2_1:86171783-86171934:-|nuORF'] 70014 26442 LVMCIVLRP True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 107.63 2 -0.7375636362170575 0.22806756455093385 1.0 ['ENSG00000078098|ENST00000188790|FAP', 'ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'FAP|p.S363Qfs*38|1|0.1|ENSG00000078098|chr2:162203073-162203107|AGCCATCCTTGTCACTAAATATTTTGTAGTACGAA/-|frameshift_variant'] 109799 7593 TEEDLEFY True H1975_Epitope_Rep2 1044.4287718625199 1044.4276699358602 34.158 2 -0.7376221144004902 0.22806756455093385 1.0 ['ENST00000471199.1_1_20:42271018-42275620:+|nuORF', 'ENSG00000101052|ENST00000373030|IFT52'] 37238 16142 GVRIKRTS True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56084496793 71.193 1 -0.7376381826696418 0.22807905232454312 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 32321 19092 GFESLSQYG True PC9_epitope_Rep4 986.4345259493 986.43342993586 81.528 2 -0.7377064584568511 0.2280986324201253 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 66768 14805 LSLPLRIFYY True NCI_RA007_Epitope_Rep2 1283.72779484703 1283.7266899358601 62.264 2 -0.7377494308573035 0.2280986324201253 1.0 ['ENSG00000147138|ENST00000645147|GPR174', 'GPR174|p.P88Lfs*10|1|0.7|ENSG00000147138|chrX:79171266-79171266|G/-|frameshift_variant'] 36392 9782 GVFKMCYNYR True PC9_epitope_Rep5 1279.5841844717897 1279.5825449037902 42.596 3 -0.7377753187709759 0.2280986324201253 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant', 'MUC5B|p.P1935Lfs*5|1|0.25|ENSG00000117983|chr11:1242680-1242680|C/-|frameshift_variant'] 79907 17783 PEPRRAWAV True PC9_epitope_Rep6 1080.58286194884 1080.5817699358602 81.037 2 -0.737788847975957 0.22810333025802804 1.0 ['ENST00000602819.5_1_4:119199941-119200194:+|nuORF'] 38647 18950 HFLNNLKGEN True PC9_epitope_Rep4 1184.5938205553598 1184.59272993586 80.979 2 -0.7377889373587604 0.22810333025802804 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 123184 22425 VGLAVFLIYKF True PC9_epitope_Rep2 1268.7532813188798 1268.75218993586 91.749 2 -0.7378195961585142 0.22810333025802804 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 64201 9239 LPGKSLTY True PC9_epitope_Rep2 877.49091862661 877.48982993586 40.877 2 -0.7378413971602915 0.2281148163028436 1.0 ['ENST00000374232.7_1_9:115631560-115631692:+|nuORF'] 69243 11484 LTSVPGAAA True PC9_epitope_Rep5 785.42831837005 785.4272299358599 49.171 2 -0.7379896317713479 0.22814118207249567 1.0 ['ENST00000482818.1_1_22:29724812-29725148:-|nuORF'] 44602 14602 ILQREATL True PC9_epitope_Rep2 942.5498304850599 942.54872993586 61.435 2 -0.7380568770245906 0.22818712058088322 1.0 ['nc|ENSG00000124019|Q9H5Z6-2|FAM124B', 'ENSG00000124019|ENST00000409685|FAM124B'] 90007 12367 RDQHWYITHLE True H1975_Epitope_Rep2 1496.7160609463597 1496.7149699358602 52.654 2 -0.7380867169035479 0.22818712058088322 1.0 ['TRIM37|p.Q421H|1|0.34|ENSG00000108395|chr17:59051265-59051265|C/A|missense_variant'] 60105 11573 LGLTDHAEL True PC9_epitope_Rep6 967.49746055903 967.49636993586 55.624 2 -0.7380951352033412 0.22818712058088322 1.0 ['OR5J2|p.C97Sfs*21|1|0.27|ENSG00000174957|chr11:56176907-56176907|G/-|frameshift_variant', 'OR5J2|p.A25Sfs*97|1|0.25|ENSG00000174957|chr11:56176685-56176686|-/A|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 47162 7867 ITVWVFLHLFF True PC9_epitope_Rep3 1420.7907294567597 1420.78909490379 35.246 3 -0.738140281933017 0.22818712058088322 1.0 ['HAL1M8_dup1066|chr8:143743399-143743515:-|1.0001785874433358|0.3402307778492503|1.56|539.0|8|3|anti-sense'] 20735 16235 EQETLALLEVK True H1975_Epitope_Rep1 1271.69728256439 1271.69677496793 67.797 1 -0.7381519583259094 0.22821348331324673 1.0 ['ENST00000463670.5_1_1:156255017-156255322:+|nuORF', 'TMEM79|p.G188Afs*11|1|0.32|ENSG00000163472|chr1:156285785-156285785|G/-|frameshift_variant', 'ENST00000495881.1_1_1:156255017-156255866:+|nuORF', 'ENSG00000163472|ENST00000405535|TMEM79'] 83876 9204 PVPFTNGEIQK True PC9_epitope_Rep4 1228.6451874218799 1228.6435349037902 43.0 3 -0.7382219795621511 0.22825472399940486 1.0 ['ENSG00000109062|ENST00000262613|NHERF1', 'nc|ENSG00000109062|O14745-2|NHERF1'] 129746 21904 VRQLRHLHRTR True PC9_epitope_Rep6 1470.8756303359398 1470.8745299358602 97.156 2 -0.7382779341563261 0.2283108419752719 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 101135 5997 SLGQFMKA True NCI_RA007_Epitope_Rep5 880.4476739156398 880.44656993586 29.751 2 -0.7383775186129585 0.22835207998571683 1.0 ['ENSG00000130821|ENST00000253122|SLC6A8', 'ENST00000476466.1_1_X:152954203-152956038:+|nuORF'] 126564 12409 VLLRMLYPRVW True PC9_epitope_Rep6 1444.83769673252 1444.83658993586 59.158 2 -0.7383944082319396 0.22835512322817664 1.0 ['ENSG00000144031|ENST00000360589|ANKRD53'] 102578 10070 SLWALCTACRR True H1975_Epitope_Rep1 1278.63253164654 1278.63142993586 43.676 2 -0.7384054207658158 0.22835512322817664 1.0 ['ENST00000489212.2_1_20:62368875-62369414:+|nuORF', 'ENST00000465591.1_1_20:62368003-62369414:+|nuORF', 'ENSG00000203896|ENST00000309546|LIME1'] 57307 5707 LEAAGDKF True PC9_epitope_Rep6 849.42323298961 849.42212993586 30.083 2 -0.7384373588822201 0.22835512322817664 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 44824 11799 INDHQLFEQMR True PC9_epitope_Rep5 1429.67723290949 1429.67557490379 50.381 3 -0.7384384088350842 0.22835512322817664 1.0 ['nc|ENSG00000073670|O75078-2|ADAM11', 'ENSG00000073670|ENST00000200557|ADAM11'] 68985 9729 LTPNQTNI True PC9_epitope_Rep5 899.4712458111901 899.47014993586 42.391 2 -0.7384401818018854 0.22835512322817664 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 39233 18656 HIIENIVAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 76.98 2 -0.738450807043331 0.22835512322817664 1.0 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 56729 6746 LDLFMHRK True NCI_RA007_Epitope_Rep5 1058.5695203838202 1058.5684299358602 32.622 2 -0.7384637568080823 0.22835512322817664 1.0 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 45806 13814 ISDDIDDP True PC9_epitope_Rep6 888.3712569864 888.37014993586 64.939 2 -0.7384712225715938 0.22835512322817664 1.0 ['ENSG00000154059|ENST00000284202|IMPACT'] 129493 25894 VRKERKRHKT True PC9_epitope_Rep4 1336.81638412432 1336.8152899358602 109.31 2 -0.7384714819569685 0.22835512322817664 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 12625 18667 DLAPRLHPRAP True PC9_epitope_Rep1 1241.69928868341 1241.69818993586 76.593 2 -0.738476221358769 0.22835512322817664 1.0 ['ENST00000569969.5_2_16:28995606-28996332:+|nuORF'] 61685 24898 LKVKFKFIL True PC9_epitope_Rep2 1134.7528873960598 1134.75124490379 101.44 3 -0.7385234718838504 0.22835512322817664 1.0 ['ENST00000508325.5_1_5:68860950-68862940:+|nuORF'] 79427 17110 PATSCLRCPLS True PC9_epitope_Rep2 1146.55254999034 1146.55144993586 71.063 2 -0.7385450825631337 0.22835512322817664 1.0 ['ENST00000278407.8_1_11:57382057-57382189:+|nuORF'] 19092 12295 ELGFKRYNSL True PC9_epitope_Rep2 1225.64552177505 1225.64386490379 52.602 3 -0.7385450992926925 0.22835512322817664 1.0 ['ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF'] 21291 7360 EREEEDDYRQE True H1975_Epitope_Rep2 1496.6015442562395 1496.59990490379 33.251 3 -0.738549863412531 0.22835512322817664 1.0 ['ENSG00000143167|ENST00000367868|GPA33'] 60307 8530 LGSFEKDSS True H1975_Epitope_Rep2 968.445090633 968.44398993586 37.765 2 -0.7386074146293778 0.22835512322817664 1.0 ['ENST00000585294.5_2_17:55940614-55940695:-|nuORF'] 107269 22110 SVLDDKLV True PC9_epitope_Rep1 887.49639792987 887.49530993586 89.859 2 -0.7386192999336153 0.22835512322817664 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 56444 17270 LDEKHEDVP True PC9_epitope_Rep3 1080.50875351872 1080.5076499358602 71.584 2 -0.7386234566176791 0.22835512322817664 1.0 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 131702 10747 VTNPDTQEIK True H1975_Epitope_Rep1 1143.57716743171 1143.57606993586 46.303 2 -0.7386322580392443 0.22835512322817664 1.0 ['ENSG00000114204|ENST00000264677|SERPINI2'] 33942 9716 GLSAPVPR True H1975_Epitope_Rep3 795.46028720467 795.4597349679301 42.392 1 -0.738641027406844 0.22835512322817664 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000124177|ENST00000373233|CHD6', 'nc|ENSG00000124177|Q8TD26-3|CHD6'] 19412 16121 ELMDIIIETEL True PC9_epitope_Rep2 1317.67377023849 1317.67266993586 67.267 2 -0.7386478834635519 0.22835512322817664 1.0 ['ENSG00000039139|ENST00000265104|DNAH5'] 91025 23816 RFHVLKMLLNL True PC9_epitope_Rep2 1382.8220466683797 1382.8204049037902 97.079 3 -0.738665419386765 0.22835512322817664 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 135966 23979 WQGRRLAL True NCI_RA007_Epitope_Rep3 998.5773826455799 998.57628993586 103.88 2 -0.7387068509243236 0.22838147365916053 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 67686 9571 LSWGAPVAS True PC9_epitope_Rep1 886.45486747106 886.45376993586 41.672 2 -0.7388085524197985 0.2284226965122332 1.0 ['nc|ENSG00000290676|Q6UXR4|SERPINA13P'] 121964 13410 VFTMQWFLTLF True PC9_epitope_Rep1 1431.7260805948697 1431.7244249037901 56.443 3 -0.738841225388615 0.22844224991820103 1.0 ['nc|ENSG00000288591|Q9Y2I9-3|TBC1D30', 'ENSG00000111490|ENST00000539867|TBC1D30', 'nc|ENSG00000288591|Q9Y2I9-4|TBC1D30', 'nc|ENSG00000288591|Q9Y2I9|TBC1D30'] 131203 8389 VTENPDRVKLK True H1975_Epitope_Rep1 1297.73539940861 1297.7343099358602 37.196 2 -0.7388737426539561 0.22844224991820103 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 133034 22392 VVPIPVVKKKK True H1975_Epitope_Rep2 1233.85366406649 1233.85201490379 92.538 3 -0.7388809299277317 0.22844224991820103 1.0 ['ENSG00000103888|ENST00000394685|CEMIP'] 30782 7080 GALVARAAVLQ True NCI_RA007_Epitope_Rep4 1067.6451278522297 1067.64402993586 33.857 2 -0.7389062055742233 0.2284537247728253 1.0 ['ENSG00000258839|ENST00000555147|MC1R'] 1027 9319 AEAEKLTLSHP True H1975_Epitope_Rep3 1194.6244519773 1194.62334993586 40.841 2 -0.7390166045513039 0.22847795375120827 1.0 ['SPTA1|p.K326E|1|0.39|ENSG00000163554|chr1:158676277-158676277|T/C|missense_variant'] 79400 10876 PASWIWWRMLR True H1975_Epitope_Rep1 1500.7812444855597 1500.7801499358602 46.794 2 -0.739018042484054 0.22847795375120827 1.0 ['nc|ENSG00000244694|Q6ZW05|PTCHD4', 'ENSG00000244694|ENST00000339488|PTCHD4'] 94800 23469 RSPRGILG True PC9_epitope_Rep4 854.5086343794198 854.50752993586 98.561 2 -0.7391291816089304 0.22847795375120827 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 121485 19176 VEYLIKESP True PC9_epitope_Rep3 1076.57537652656 1076.57426993586 78.979 2 -0.7391385305866119 0.22847795375120827 1.0 ['CON__Q58D62', 'nc|ENSG00000090512|Q9UGM5-2|FETUB', 'ENSG00000090512|ENST00000265029|FETUB'] 101734 7514 SLNIKTTVP True NCI_RA007_Epitope_Rep1 971.56514619603 971.56404993586 33.22 2 -0.7391514033883683 0.22847795375120827 1.0 ['ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 59484 8288 LFQTNTEL True PC9_epitope_Rep4 964.48656152216 964.48546993586 39.34 2 -0.7391516975333641 0.22847795375120827 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'ATP11C|p.T977Lfs*10|1|0.31|ENSG00000101974|chrX:139745767-139745767|C/-|frameshift_variant'] 37071 4336 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 21.667 3 -0.7391608882012991 0.22848942688040924 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 93417 3809 RQEVAMMRNR True NCI_RA007_Epitope_Rep5 1289.6444933125697 1289.6428349037901 20.845 3 -0.7391896916270618 0.2285008996683867 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 116877 5571 TVFAAAEE True NCI_RA007_Epitope_Rep4 836.39159850816 836.39050993586 28.03 2 -0.7392297100310092 0.22851237211515585 1.0 ['ENSG00000038219|ENST00000040738|BOD1L1'] 81580 20024 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 83.809 3 -0.7392713239635518 0.22851620576865894 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 86891 5675 QLRTCFSRQRF True NCI_RA007_Epitope_Rep1 1440.7408362255599 1440.73918490379 26.133 3 -0.7392934177622629 0.22851620576865894 1.0 ['ENST00000263657.6_1_2:68385017-68385164:+|nuORF'] 89917 6188 RCRENKHK True H1975_Epitope_Rep3 1069.55632993117 1069.55522993586 28.815 2 -0.7392958534857137 0.22851620576865894 1.0 ['ENSG00000182752|ENST00000328252|PAPPA'] 94369 20423 RRRQLWKKSV True NCI_RA007_Epitope_Rep5 1355.8262205320298 1355.82457490379 85.493 3 -0.7393412181411172 0.22851620576865894 1.0 ['GRIN2A|p.P1010R|1|0.18|ENSG00000183454|chr16:9764515-9764515|G/C|missense_variant'] 36877 18536 GVLLRRYSR True NCI_RA007_Epitope_Rep5 1118.66726027914 1118.66667496793 78.125 1 -0.7393518474690209 0.22851620576865894 1.0 ['GPX1|p.P175L|1|0.2|ENSG00000233276|chr3:49357476-49357476|G/A|missense_variant'] 61019 10576 LIERLEDLK True PC9_epitope_Rep3 1127.6550238295897 1127.6533649037901 45.628 3 -0.7393686565150462 0.22851620576865894 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 70015 26602 LVMCIVLRP True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 108.4 2 -0.7393707435281853 0.22851620576865894 1.0 ['ENSG00000078098|ENST00000188790|FAP', 'ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'FAP|p.S363Qfs*38|1|0.1|ENSG00000078098|chr2:162203073-162203107|AGCCATCCTTGTCACTAAATATTTTGTAGTACGAA/-|frameshift_variant'] 15735 15870 ECDDCDSC True PC9_epitope_Rep3 888.1935696015601 888.19246993586 66.193 2 -0.7394160865993654 0.22851620576865894 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 25015 2851 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 14.913 2 -0.739424538327588 0.22851620576865894 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 111960 12926 TIQNDILKEF True PC9_epitope_Rep3 1219.6448530687096 1219.64320490379 54.744 3 -0.7394488312331666 0.22851620576865894 1.0 ['ENSG00000146085|ENST00000274813|MMUT'] 141050 6889 YSLSEPPR True NCI_RA007_Epitope_Rep3 947.4712458111899 947.47014993586 34.205 2 -0.7394809076714278 0.22851620576865894 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28'] 24925 21106 FCIQHHTFY True H1975_Epitope_Rep2 1194.52804949466 1194.52694993586 87.362 2 -0.739481669704543 0.22851620576865894 1.0 ['nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C', 'ENSG00000224960|ENST00000412172|PPP4R3C'] 70914 18265 LYFCLHFVI True PC9_epitope_Rep5 1153.5994235297699 1153.5983299358602 75.272 2 -0.7394964357170392 0.22852088072194224 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|239|3|anti-sense'] 105077 23476 SRDRQKYL True H1975_Epitope_Rep2 1064.57269118796 1064.5715899358602 96.776 2 -0.7395173321106208 0.22852088072194224 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43'] 73820 10165 NALDEKQL True NCI_RA007_Epitope_Rep5 929.4818104948899 929.48070993586 45.734 2 -0.7395299049160557 0.22852088072194224 1.0 ['ENSG00000134108|ENST00000256496|ARL8B', 'ENST00000455168.5_1_3:5164021-5220395:+|nuORF'] 130485 15468 VSPRGLGR True H1975_Epitope_Rep2 840.49298431528 840.49188993586 64.654 2 -0.7395893188847598 0.22853235014272122 1.0 ['ENST00000415993.5_1_22:50688078-50689256:-|nuORF', 'ENST00000483222.5_1_22:50687938-50689256:-|nuORF', 'ENST00000429374.5_1_22:50686861-50689256:-|nuORF', 'ENST00000216271.9_1_22:50688078-50689256:-|nuORF', 'ENST00000496909.5_1_22:50687618-50689256:-|nuORF', 'ENST00000498366.5_1_22:50686861-50689256:-|nuORF'] 100280 10116 SIYTRSVIDP True PC9_epitope_Rep1 1149.60298825673 1149.60188993586 43.783 2 -0.7396963703042465 0.2285884189400134 1.0 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 29681 18264 FVLKKRTFTKG True PC9_epitope_Rep6 1323.8026911227896 1323.8015899358602 82.893 2 -0.7397822778406984 0.22860795623476243 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'ENST00000493438.5_1_9:135973976-135976008:-|nuORF'] 69456 14246 LTYWPQKYWAV True PC9_epitope_Rep4 1453.73942215989 1453.73832993586 62.703 2 -0.7397851696769088 0.22860795623476243 1.0 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'nc|ENSG00000185808|P57054-3|PIGP'] 62428 5299 LLHGFGGG True NCI_RA007_Epitope_Rep5 756.39187329168 756.39076993586 27.076 2 -0.7398031850170376 0.22860795623476243 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 128918 5935 VQHLWWHHHWL True PC9_epitope_Rep6 1577.77927033961 1577.7776249037902 31.121 3 -0.7398489564816114 0.22863555958556925 1.0 ['ENST00000505325.1_1_5:60642967-60643258:+|nuORF'] 19190 13098 ELHYEREALKE True H1975_Epitope_Rep1 1415.7044932031502 1415.70338993586 55.471 2 -0.7398721096899449 0.22863555958556925 1.0 ['nc|ENSG00000181626|A6NC57-2|ANKRD62', 'ENST00000418274.2_1_18:12102771-12127935:+|nuORF', 'ENSG00000181626|ENST00000587848|ANKRD62'] 94804 21289 RSPRGILG True PC9_epitope_Rep6 854.5086343794198 854.50752993586 94.741 2 -0.7398897354827426 0.22863555958556925 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 70635 13037 LWHIWRERN True NCI_RA007_Epitope_Rep4 1308.68397297244 1308.68233490379 57.248 3 -0.7399155967392792 0.22863555958556925 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 81064 6973 PIRFQWWLVP True NCI_RA007_Epitope_Rep2 1340.7393625902398 1340.73772490379 31.745 3 -0.7399228626981521 0.22863555958556925 1.0 ['ENSG00000105675|ENST00000262623|ATP4A'] 23017 10530 EVFRRFVWNFF True NCI_RA007_Epitope_Rep3 1545.7881036878096 1545.7870099358602 48.476 2 -0.7400335058959735 0.2287213485150281 1.0 ['nc|ENSG00000143324|Q9UBH6-2|XPR1', 'ENSG00000143324|ENST00000367590|XPR1'] 89554 10307 QYLYLECNVIK True H1975_Epitope_Rep1 1384.7060734262798 1384.7049699358602 44.59 2 -0.7400767944181059 0.22874427730542837 1.0 ['SLITRK2|p.Y456C|1|0.22|ENSG00000185985|chrX:145823792-145823792|A/G|missense_variant'] 43538 17277 IGPTLNIL True H1975_Epitope_Rep3 839.5116540711899 839.51110496793 72.103 1 -0.7400819459310038 0.22874427730542837 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 83628 14273 PVDNLVIK True PC9_epitope_Rep6 896.53311779176 896.53256496793 66.791 1 -0.7401357214885371 0.228763804456071 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 85523 15302 QGAGSVLF True PC9_epitope_Rep4 777.40210362221 777.4015549679301 66.792 1 -0.7401683717059573 0.228763804456071 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 76869 6447 NRDLATPVM-[Oxidation] True PC9_epitope_Rep2 1031.50698007735 1031.50588993586 30.212 2 -0.7401817410101302 0.228763804456071 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 117268 5527 TVLYISPP True H1975_Epitope_Rep3 888.49566965388 888.49456993586 26.308 2 -0.740201038112266 0.22879013079667063 1.0 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 142072 27940 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 115.87 3 -0.7402667366738241 0.22879479214660464 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 41706 5002 IAKASVQDFEK True NCI_RA007_Epitope_Rep5 1234.65575210558 1234.65409490379 25.945 3 -0.7402881229405744 0.22879479214660464 1.0 ['nc|ENSG00000156469|Q96E29-3|MTERF3', 'nc|ENSG00000156469|Q96E29-2|MTERF3', 'ENSG00000156469|ENST00000287025|MTERF3', 'ENST00000523821.5_1_8:97251721-97252051:-|nuORF'] 76868 6262 NRDLATPVM-[Oxidation] True PC9_epitope_Rep2 1031.50698007735 1031.50588993586 29.485 2 -0.7403105555742336 0.22879479214660464 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 138093 7749 YGGLRGAI True PC9_epitope_Rep1 805.4446371405298 805.44354993586 34.628 2 -0.7403264995063769 0.22880625408715297 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 64470 19240 LPPWRPWWWNR True NCI_RA007_Epitope_Rep2 1592.8153214951597 1592.81422993586 79.729 2 -0.7403688487672919 0.22881431501352437 1.0 ['ENSG00000174276|ENST00000310597|ZNHIT2'] 79893 7939 PENSPPCTVNI True H1975_Epitope_Rep2 1169.5386737480098 1169.5375699358601 35.485 2 -0.7403755219733013 0.22881431501352437 1.0 ['ENSG00000130338|ENST00000367097|TULP4'] 55132 7773 LAADPSHP True PC9_epitope_Rep4 806.3922672145 806.39116993586 37.296 2 -0.7404002387277602 0.22884063786466927 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 15736 14182 ECDDCDSC True PC9_epitope_Rep6 888.1935696015601 888.19246993586 66.431 2 -0.740409526534894 0.22884869740968064 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 23198 10161 EVLQQVLRLQV True PC9_epitope_Rep1 1323.78743498147 1323.78632993586 43.96 2 -0.7404281148685381 0.22884869740968064 1.0 ['ENSG00000130590|ENST00000369886|SAMD10', 'ENST00000478694.1_1_20:62606865-62609703:-|nuORF'] 31844 7560 GEIYEKYK True NCI_RA007_Epitope_Rep2 1028.5178616504397 1028.51676993586 34.032 2 -0.7404790254493172 0.22888987962550156 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A', 'nc|ENSG00000291090|Q3MJ40|CCDC144BP', 'nc|ENSG00000154898|Q8IYA2|CCDC144CP', 'ENST00000445752.5_1_17:18506915-18528649:-|nuORF', 'nc|ENSG00000291090|Q3MJ40-2|CCDC144BP'] 66253 20545 LSFDGQIFLL True PC9_epitope_Rep4 1151.62266107215 1151.6215699358602 87.178 2 -0.7404838675481105 0.22889453583582245 1.0 ['nc|ENSG00000203722|Q6H3X3-2|RAET1G', 'ENSG00000203722|ENST00000367360|RAET1G'] 117061 14871 TVIGQFHTL True PC9_epitope_Rep4 1014.5498304850599 1014.54872993586 65.14 2 -0.7404984417894167 0.22889453583582245 1.0 ['ENSG00000203733|ENST00000450456|GJE1'] 107936 12293 SVVTVIDVFY True H1975_Epitope_Rep1 1140.60667665484 1140.60556993586 52.309 2 -0.7405126153227195 0.22889453583582245 1.0 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 22809 5944 EVAAVAVLMC True PC9_epitope_Rep3 1004.5034745395999 1004.5029749679301 27.922 1 -0.740533111279118 0.22889919163100333 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 129480 25474 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 107.58 2 -0.7405710141066002 0.22889919163100333 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 48014 20443 IYLITLLGNGG True PC9_epitope_Rep6 1132.6492101731599 1132.64810993586 91.351 2 -0.7406320805860183 0.22889919163100333 1.0 ['ENSG00000198283|ENST00000360374|OR5B21'] 3173 6042 AGDYADLVK True NCI_RA007_Epitope_Rep2 950.4709114580199 950.46980993586 28.107 2 -0.7406624211931726 0.22891064980608347 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 9544 10896 AVYSVEHDVP True H1975_Epitope_Rep3 1114.5294889633 1114.52838993586 46.996 2 -0.740712360479148 0.2289335651346974 1.0 ['ENSG00000168263|ENST00000382082|KCNV2'] 84431 25145 QAEQKKKKRHS True PC9_epitope_Rep2 1366.77932990926 1366.77822993586 102.39 2 -0.7407212601770882 0.2289335651346974 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 117553 10669 TVSGSKQP True PC9_epitope_Rep2 802.4184819623399 802.41738993586 46.351 2 -0.7407814431291372 0.22894502228826152 1.0 ['ENST00000209875.8_1_12:54625656-54625950:-|nuORF'] 142077 28207 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 116.73 3 -0.7408608660546573 0.22895898022552705 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 85591 7820 QGGSKPRSRKD True NCI_RA007_Epitope_Rep3 1214.6479813865399 1214.6468899358601 37.877 2 -0.7408769683246823 0.22895898022552705 1.0 ['ENST00000335500.8_1_17:42478071-42478113:-|nuORF'] 28805 17755 FSVLFHPTF True PC9_epitope_Rep2 1093.55966689277 1093.55856993586 73.576 2 -0.740904174775256 0.22895898022552705 1.0 ['ENST00000225728.7_1_17:6547635-6547686:-|nuORF'] 123866 15396 VGRRAAKA True NCI_RA007_Epitope_Rep3 827.5089687325898 827.5084249679301 68.116 1 -0.7409305440027745 0.22895898022552705 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 73720 6678 MYTGGVSSLAE True H1975_Epitope_Rep2 1113.50122561013 1113.50012993586 30.596 2 -0.7409396421546326 0.22895898022552705 1.0 ['nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 69204 7233 LTSLPQQLP True H1975_Epitope_Rep3 995.5651461960299 995.56404993586 32.793 2 -0.740941623789747 0.22895898022552705 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 124356 9470 VGTVADLF True NCI_RA007_Epitope_Rep3 820.43306939732 820.43196993586 44.352 2 -0.740958197867959 0.22895898022552705 1.0 ['ENSG00000138115|ENST00000371270|CYP2C8', 'nc|ENSG00000138115|P10632-2|CYP2C8', 'ENST00000526814.5_1_10:96796887-96827187:-|nuORF'] 122487 3747 VGEIVRRFERK True NCI_RA007_Epitope_Rep1 1387.8048163811097 1387.80316490379 18.55 3 -0.7409783224017722 0.22895898022552705 1.0 ['ENST00000566600.1_1_16:1821268-1821535:-|nuORF', 'ENSG00000103024|ENST00000219302|NME3'] 116995 15779 TVGVPSLSP True PC9_epitope_Rep1 855.4701831820299 855.46908993586 65.513 2 -0.7409954140742484 0.22895898022552705 1.0 ['ENST00000429408.5_1_7:79088312-79088983:+|nuORF'] 124135 23043 VGSRGERKPR True PC9_epitope_Rep5 1140.6475874637197 1140.64707496793 93.626 1 -0.7410005050881153 0.22896363204183504 1.0 ['ENST00000371571.4_2_20:49639410-49639479:-|nuORF'] 97373 7364 SEDNDEPGDED True H1975_Epitope_Rep2 1220.3952994577598 1220.39420993586 33.265 2 -0.7410090180578589 0.22896363204183504 1.0 ['MYT1L|p.G1020Afs*19|1|0.17|ENSG00000186487|chr2:1839170-1839170|C/-|frameshift_variant', 'MYT1L|p.F1022Sfs*17|1|0.61|ENSG00000186487|chr2:1839164-1839164|A/-|frameshift_variant', 'nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L'] 127196 14306 VLVPRMCAV True PC9_epitope_Rep2 986.5405287546598 986.53942993586 60.292 2 -0.7410298510947778 0.22896363204183504 1.0 ['ENST00000302516.9_1_16:70607775-70608060:+|nuORF'] 9154 16831 AVLDRNVAI True PC9_epitope_Rep2 969.5607295219299 969.55962993586 69.989 2 -0.7411457022683157 0.22900479847874852 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 142079 28580 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 118.77 3 -0.7412074812449216 0.2290311079418843 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 14991 10813 DYILQHKK True H1975_Epitope_Rep3 1043.57637958607 1043.5752899358602 46.671 2 -0.7412547000742786 0.22904256109336701 1.0 ['nc|ENSG00000148219|O75129-2|ASTN2', 'nc|ENSG00000148219|O75129-3|ASTN2', 'ENSG00000148219|ENST00000313400|ASTN2', 'nc|ENSG00000148219|O75129-6|ASTN2', 'nc|ENSG00000148219|O75129-4|ASTN2'] 56304 14956 LDAQVKELVLK True NCI_RA007_Epitope_Rep2 1254.7547378708598 1254.75364993586 62.856 2 -0.7412773121884723 0.2290540139045695 1.0 ['ENSG00000163902|ENST00000296255|RPN1'] 81577 19763 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 82.757 3 -0.741280838957808 0.22906206363825427 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 58953 19414 LETSLRRL True NCI_RA007_Epitope_Rep4 986.58727862294 986.58618993586 83.943 2 -0.7413141029540281 0.22906206363825427 1.0 ['ENSG00000137507|ENST00000260061|LRRC32'] 11166 4635 DDMGRRNA True PC9_epitope_Rep3 933.4086626379699 933.40756993586 22.923 2 -0.7414092586321926 0.22906671023900418 1.0 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210', 'KIAA1210|p.A1218Hfs*41|1|0.33|ENSG00000250423|chrX:119087578-119087578|C/-|frameshift_variant', 'KIAA1210|p.E900*|1|0.52|ENSG00000250423|chrX:119088532-119088533|-/A|frameshift_variant'] 123751 16674 VGRHQRGR True NCI_RA007_Epitope_Rep3 964.5427284723598 964.54217496793 73.396 1 -0.7414151109630136 0.22906671023900418 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 98593 18609 SFSKRFFSEHV True PC9_epitope_Rep1 1369.67788453249 1369.6767899358601 76.367 2 -0.7414515624340864 0.22906671023900418 1.0 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 125830 11449 VLADELSPIK True NCI_RA007_Epitope_Rep5 1083.6175756917098 1083.61646993586 50.687 2 -0.7414889932278648 0.22907816167077627 1.0 ['ENSG00000136449|ENST00000323776|MYCBPAP', 'nc|ENSG00000136449|Q8TBZ2|MYCBPAP'] 123756 17285 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 73.26 1 -0.7415106540843966 0.22908620996969878 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 60573 11943 LHGELVEDIP True H1975_Epitope_Rep2 1120.57643915572 1120.57534993586 51.017 2 -0.7415289379175901 0.22908620996969878 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 92192 8683 RLGRRRLYC True NCI_RA007_Epitope_Rep4 1191.6771137701899 1191.67546490379 40.186 3 -0.7415535998518727 0.2290976606015596 1.0 ['ENST00000313173.5_1_2:176994704-176994896:+|nuORF'] 128905 17476 VQFWKMLIL True H1975_Epitope_Rep2 1176.6729228231998 1176.6718299358602 72.512 2 -0.7415887912205227 0.2291091108932656 1.0 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 63849 15237 LNLDIGYFL True PC9_epitope_Rep5 1066.5698972233001 1066.5688099358601 63.618 2 -0.7416166005524958 0.22913541372703372 1.0 ['ENST00000535011.6_1_7:128411412-128411451:+|nuORF'] 76870 7190 NRDLATPVM-[Oxidation] True PC9_epitope_Rep3 1031.50698007735 1031.50588993586 32.668 2 -0.741682254670726 0.2291583121686049 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 62683 13033 LLLLLLLL True NCI_RA007_Epitope_Rep3 922.68307650074 922.68196993586 58.538 2 -0.7417149846036987 0.2291583121686049 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'SEMA6C|p.M8I|1|0.48|ENSG00000143434|chr1:151142598-151142598|C/G|missense_variant', 'EIF2AK3|p.E232Rfs*74|1|0.4|ENSG00000172071|chr2:88593345-88593345|C/-|frameshift_variant', 'ENSG00000184709|ENST00000371542|LRRC26', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'PCDHA8|p.W12G|1|0.22|ENSG00000204962|chr5:140841355-140841355|T/G|missense_variant', 'ENSG00000117899|ENST00000261758|MESD', 'ENSG00000182685|ENST00000328540|BRICD5', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000183971|ENST00000566435|NPW', 'ENSG00000070031|ENST00000176195|SCT', 'ENSG00000178473|ENST00000380433|UCN3', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'nc|ENSG00000117899|Q14696-2|MESD', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000121316|ENST00000240617|PLBD1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 56594 13125 LDHKREIRQWR True NCI_RA007_Epitope_Rep1 1535.84332714815 1535.8422299358601 55.048 2 -0.7417679452706074 0.22922916976087926 1.0 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-5|ATP7A'] 56898 13465 LDQACVPSP True PC9_epitope_Rep4 928.43241777432 928.4318649679301 59.69 1 -0.7417860163324674 0.2292406172491126 1.0 ['ENSG00000225190|ENST00000430334|PLEKHM1', 'ENST00000582201.5_1_17:62781409-62811241:-|nuORF'] 105482 1518 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 8.6519 3 -0.7418115938793587 0.2292520643973148 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 118858 7930 VAASTGIDLL True PC9_epitope_Rep4 958.53351171458 958.53240993586 37.935 2 -0.7418491695918293 0.2292783627641721 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 140102 5368 YQNARDLLN True NCI_RA007_Epitope_Rep3 1105.55162139021 1105.5505299358601 28.122 2 -0.7418742921527909 0.2293195116880031 1.0 ['nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 78835 9459 PAEAIKEHERW True PC9_epitope_Rep1 1364.68369818892 1364.68260993586 41.239 2 -0.7419120729383369 0.22933095715452587 1.0 ['ENSG00000174945|ENST00000683327|AMZ1'] 28830 5881 FSWLYTMIK True NCI_RA007_Epitope_Rep4 1187.60490283303 1187.6032649037902 29.245 3 -0.7419404094342665 0.22934240228109778 1.0 ['ENSG00000174145|ENST00000309447|NWD2'] 64307 17824 LPKNFSIKEIF True PC9_epitope_Rep6 1334.7598232512998 1334.75818490379 81.191 3 -0.7419698715836441 0.22939499242626749 1.0 ['ENSG00000120915|ENST00000521400|EPHX2', 'ENST00000520623.5_1_8:27348689-27396319:+|nuORF', 'nc|ENSG00000120915|P34913-3|EPHX2', 'nc|ENSG00000120915|P34913-2|EPHX2'] 34154 4490 GNENHMYLEVK True NCI_RA007_Epitope_Rep2 1332.6132356706 1332.6121299358601 22.096 2 -0.7419699018286763 0.22939499242626749 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 22099 8934 ESPSRKPRP True NCI_RA007_Epitope_Rep5 1052.57269118796 1052.5715899358602 41.026 2 -0.7420190025882931 0.22939621632859136 1.0 ['CHTF18|p.R320S|1|0.4|ENSG00000127586|chr16:791226-791226|G/T|missense_variant'] 111307 9463 THMTAIVGM-[Oxidation] True PC9_epitope_Rep1 975.4517737003499 975.45066993586 41.255 2 -0.7420571958450689 0.22939621632859136 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 102697 8433 SLYYHIRMSKM True NCI_RA007_Epitope_Rep5 1427.70536223363 1427.70426993586 39.117 2 -0.7420649092455468 0.22939621632859136 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 128912 18263 VQHEVYSEVP True PC9_epitope_Rep2 1185.56660274801 1185.56550993586 75.57 2 -0.7420667005273733 0.22939621632859136 1.0 ['ENST00000367353.1_1_1:200377814-200377871:-|nuORF'] 25012 2557 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 13.522 2 -0.7420816061574459 0.22940765929643764 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68939 7583 LTPDGEYFYSS True H1975_Epitope_Rep3 1277.54519859709 1277.5441099358602 34.149 2 -0.7421095776440952 0.22941910192444762 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14'] 100003 13415 SIPVFKTEWIM True H1975_Epitope_Rep1 1349.70534515029 1349.7042499358602 56.714 2 -0.7421572378171202 0.22946024203727078 1.0 ['nc|ENSG00000152556|P08237-3|PFKM'] 3830 10893 AGVLTGLG True PC9_epitope_Rep1 686.39628996578 686.39574496793 46.785 1 -0.7421759570395784 0.22948653223650997 1.0 ['ENSG00000100156|ENST00000681075|SLC16A8'] 132580 25604 VVEQLLNSVA True PC9_epitope_Rep1 1070.5971746003 1070.5960699358602 103.5 2 -0.7421851727844652 0.22949797318366075 1.0 ['ENSG00000135763|ENST00000258243|URB2', 'URB2|p.L474Ffs*10|1|0.14|ENSG00000135763|chr1:229636030-229636031|-/T|frameshift_variant'] 91837 25567 RKKKKKHH True NCI_RA007_Epitope_Rep5 1088.7043144942 1088.70377496793 105.88 1 -0.7422321364905226 0.22952426204193146 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 13293 9235 DLTGKNLHP True H1975_Epitope_Rep1 993.5243440132099 993.52324993586 40.432 2 -0.7423299662255054 0.22957683741648108 1.0 ['nc|ENSG00000145604|Q13309-2|SKP2', 'ENSG00000145604|ENST00000274255|SKP2'] 14796 7292 DVQDQWIGP True H1975_Epitope_Rep3 1056.4876241513198 1056.48652993586 33.023 2 -0.7423427823803477 0.22957683741648108 1.0 ['ENST00000308744.10_1_4:72994598-73003853:+|nuORF', 'nc|ENSG00000056291|Q9Y5X5-4|NPFFR2'] 80275 13665 PGEDPPVS True NCI_RA007_Epitope_Rep3 796.36029837988 796.35920993586 61.061 2 -0.7423634766306679 0.22958145888082193 1.0 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 121537 13972 VFATDDGF True PC9_epitope_Rep6 870.3759484440199 870.37484993586 65.602 2 -0.7423951782549609 0.22958145888082193 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 36468 6628 GVGGLRGTFF True NCI_RA007_Epitope_Rep4 1009.5345147740899 1009.53340993586 32.122 2 -0.7423998857117021 0.22958145888082193 1.0 ['ENST00000265339.6_1_5:133707203-133707263:+|nuORF'] 7939 9140 ATAQQASLP True PC9_epitope_Rep2 885.4555957470499 885.45448993586 40.498 2 -0.7425101350097256 0.22965228494224546 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 132447 17306 VVCVPLLLLP True NCI_RA007_Epitope_Rep3 1064.6667748136 1064.66566993586 75.955 2 -0.7425748465251413 0.2296785687773736 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4'] 128828 13383 VQAVVPRGL True PC9_epitope_Rep4 937.5709002828098 937.56980993586 59.381 2 -0.7425927043979289 0.22969000534473544 1.0 ['ENST00000478371.1_1_9:123629171-123630543:-|nuORF', 'ENST00000419155.5_1_9:123629171-123631115:-|nuORF'] 123114 13497 VGKLHDAKVI True PC9_epitope_Rep3 1078.6498788795 1078.6487899358601 56.968 2 -0.742626200635074 0.2297014415725166 1.0 ['ENSG00000173809|ENST00000639142|TDRD12', 'nc|ENSG00000173809|Q587J7|TDRD12'] 88355 15020 QSIVGAEGLSL True PC9_epitope_Rep1 1072.57643915572 1072.57534993586 62.595 2 -0.7426830420930365 0.22972772350723003 1.0 ['nc|ENSG00000140386|Q9BY12-3|SCAPER', 'ENSG00000140386|ENST00000563290|SCAPER'] 125357 9529 VIQQKWRDYYR True NCI_RA007_Epitope_Rep2 1553.81029568437 1553.80864490379 41.679 3 -0.7427189338109148 0.22973815461346633 1.0 ['nc|ENSG00000066933|B2RTY4-2|MYO9A', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF', 'MYO9A|p.E1131Kfs*31|1|0.23|ENSG00000066933|chr15:71899766-71899766|C/-|frameshift_variant', 'MYO9A|p.V1543Dfs*13|1|0.1|ENSG00000066933|chr15:71897875-71897876|-/AT|frameshift_variant'] 94801 27355 RSPRGILG True PC9_epitope_Rep5 854.5086343794198 854.50752993586 112.14 2 -0.7427338625594219 0.22973815461346633 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 25623 11583 FENLDQQLR True H1975_Epitope_Rep1 1161.5778361380499 1161.5767299358602 49.541 2 -0.7427395431300697 0.22973815461346633 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 119463 25606 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 104.18 1 -0.742742026159567 0.22973815461346633 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 119454 25186 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 104.39 1 -0.7427499327922685 0.22973815461346633 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 126206 12220 VLGDEVIG True PC9_epitope_Rep4 800.4279840168799 800.42688993586 54.825 2 -0.7428564592738257 0.22973815461346633 1.0 ['ENSG00000214595|ENST00000356458|EML6'] 94396 10855 RRRRKGTNIS True NCI_RA007_Epitope_Rep3 1242.7381338036198 1242.73648490379 49.755 3 -0.7429017747857039 0.22973815461346633 1.0 ['ENSG00000104549|ENST00000265896|SQLE'] 12600 20095 DLAEMGCGPV True PC9_epitope_Rep2 990.4150534580198 990.41394993586 82.704 2 -0.7429098890456387 0.22973815461346633 1.0 ['ENSG00000102221|ENST00000614628|JADE3'] 81575 19546 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 81.899 3 -0.7429197779930475 0.22973815461346633 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 62991 21046 LLPNWRKL True PC9_epitope_Rep3 1038.6338348925399 1038.6327299358602 86.232 2 -0.7429225821561747 0.22973815461346633 1.0 ['ENSG00000157224|ENST00000496677|CLDN12'] 124622 15948 VGWGSRGS True NCI_RA007_Epitope_Rep3 804.3878505404 804.38730496793 70.399 1 -0.7429952482301574 0.22975540251721682 1.0 ['ENST00000238855.11_1_2:64751466-64751667:+|nuORF'] 128030 5966 VPKHQCGRC True PC9_epitope_Rep1 1026.4851391368597 1026.4840499358602 27.762 2 -0.7430251978225789 0.22975540251721682 1.0 ['nc|ENSG00000180329|Q96MW1-2|CCDC43'] 1442 9902 AEEGEKKIL True H1975_Epitope_Rep3 1015.5549754351498 1015.55386993586 43.119 2 -0.7430460061187936 0.22975540251721682 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF'] 93047 20014 RPLVPEVSI True PC9_epitope_Rep5 1008.59678067748 1008.59568993586 82.035 2 -0.7430560731201198 0.22975540251721682 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 114648 9374 TQEAIQGMLCM True H1975_Epitope_Rep1 1223.5348513208698 1223.5337499358602 40.966 2 -0.743068499937318 0.22975540251721682 1.0 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8', 'nc|ENSG00000172943|Q9UPP1-5|PHF8'] 62781 21427 LLLSGRRNVWK True PC9_epitope_Rep5 1340.80408810512 1340.80298993586 87.482 2 -0.7430759315878167 0.22975540251721682 1.0 ['ENSG00000151470|ENST00000425929|C4orf33'] 16138 10127 EEAVELERY True NCI_RA007_Epitope_Rep1 1136.5349682665599 1136.5338699358601 43.403 2 -0.7430891494065534 0.22975540251721682 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 100952 15889 SLFKTRLP True PC9_epitope_Rep6 960.5756513100799 960.57454993586 73.395 2 -0.7431049919661048 0.22975540251721682 1.0 ['ENSG00000102575|ENST00000648477|ACP5', 'ENST00000590420.1_1_19:11685827-11688432:-|nuORF'] 131532 22554 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 94.271 2 -0.7431300620067424 0.22978628673196794 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 124798 14113 VHFNVDIE True PC9_epitope_Rep2 971.4712458111899 971.47014993586 59.559 2 -0.7431373995528671 0.22978628673196794 1.0 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 113897 9395 TNQIKQKFGLT True H1975_Epitope_Rep1 1276.7139356880398 1276.71282993586 41.049 2 -0.7431404967198333 0.22978628673196794 1.0 ['ENSG00000138152|ENST00000260723|BTBD16', 'nc|ENSG00000138152|Q32M84-2|BTBD16'] 118853 10560 VAASLPYMTCP True H1975_Epitope_Rep3 1151.5355029438701 1151.5344099358601 45.686 2 -0.7431452132020431 0.22978628673196794 1.0 ['ENSG00000183760|ENST00000331256|ACP7'] 79499 8217 PCCGCCCG True PC9_epitope_Rep1 744.15217989724 744.15162496793 36.439 1 -0.7431639275378157 0.22979771745744348 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 119456 25371 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 105.12 1 -0.7431989439492017 0.22980914784363776 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 32420 12028 GFSLTPSK True PC9_epitope_Rep1 835.44396843419 835.44286993586 51.126 2 -0.743292778674657 0.22982057789056587 1.0 ['ENSG00000121058|ENST00000240316|COIL'] 9263 10215 AVPHSGLNSI True PC9_epitope_Rep5 993.52434401321 993.52324993586 44.28 2 -0.743325958334525 0.22984684791641932 1.0 ['nc|ENSG00000168004|Q96KN8-2|PLAAT5', 'nc|ENSG00000168004|Q96KN8|PLAAT5'] 139619 2718 YLYRHKYENYR True NCI_RA007_Epitope_Rep2 1603.7895602397898 1603.78737987172 14.799 4 -0.7434267226338865 0.2299473176522965 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644', 'ZNF644|p.I882Mfs*40|1|0.08|ENSG00000122482|chr1:90938654-90938708|CTGACCTTCCACTTTGCTCTTAAATAAAGGGAATAAATTTACATGCTCTTGATTA/-|frameshift_variant'] 81926 8418 PLSPHASGSL True PC9_epitope_Rep1 964.4977949122 964.49668993586 37.215 2 -0.7435261604512903 0.22996675966047367 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 100329 6622 SKKRRWAP True NCI_RA007_Epitope_Rep4 1027.6039317465898 1027.6028299358602 32.098 2 -0.743553454810818 0.22996675966047367 1.0 ['ENST00000484875.5_1_20:46386013-46414798:-|nuORF', 'ENST00000437955.1_1_20:46386013-46414096:-|nuORF', 'ENST00000359930.8_1_20:46386013-46414675:-|nuORF'] 131534 22726 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 94.965 2 -0.7435569301477171 0.22996675966047367 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 19282 12204 ELKLEALTQR True PC9_epitope_Rep1 1199.68738658703 1199.68628993586 51.801 2 -0.7435956086504327 0.22997818635088813 1.0 ['ENSG00000144791|ENST00000273317|LIMD1'] 8211 11871 ATFSFSRSTR True PC9_epitope_Rep3 1158.57817049122 1158.5770699358602 50.68 2 -0.7436210364617734 0.22998961270218132 1.0 ['ENST00000409031.5_3_2:130940142-130940265:-|nuORF'] 84019 13755 PVTLNLLPKLP True NCI_RA007_Epitope_Rep2 1203.7590949753098 1203.75745490379 58.15 3 -0.7436835296280887 0.2300010387143684 1.0 ['ENSG00000183668|ENST00000270077|PSG9', 'ENST00000593983.5_1_19:43519347-43523525:-|nuORF', 'nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221878|ENST00000406070|PSG7', 'ENSG00000170848|ENST00000187910|PSG6', 'nc|ENSG00000170848|Q00889|PSG6', 'ENSG00000221826|ENST00000327495|PSG3'] 133139 7309 VVQSFDMFKDK True NCI_RA007_Epitope_Rep4 1342.6591232338599 1342.6580299358602 34.75 2 -0.7437384786013365 0.2300170635803843 1.0 ['ENSG00000150347|ENST00000279873|ARID5B', 'nc|ENSG00000150347|Q14865-2|ARID5B'] 81306 14864 PLAGFGYG True H1975_Epitope_Rep2 780.3806399016398 780.3800949679301 62.327 1 -0.7437397515489275 0.2300170635803843 1.0 ['ENSG00000004799|ENST00000005178|PDK4', 'ENST00000468445.1_1_7:95216267-95216813:-|nuORF', 'ENST00000512204.5_1_17:48185497-48187458:+|nuORF', 'ENST00000473796.1_1_7:95214955-95221973:-|nuORF', 'nc|ENSG00000005882|Q15119-2|PDK2', 'ENSG00000005882|ENST00000503176|PDK2', 'ENSG00000152256|ENST00000282077|PDK1', 'ENSG00000067992|ENST00000379162|PDK3', 'nc|ENSG00000067992|Q15120-2|PDK3', 'nc|ENSG00000152256|Q15118-2|PDK1'] 131535 22815 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 95.326 2 -0.743778975391077 0.2300170635803843 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 32045 10543 GERDPSLVEAQ True PC9_epitope_Rep2 1199.57823006087 1199.57712993586 45.874 2 -0.743784014695818 0.2300170635803843 1.0 ['ENST00000504986.5_1_4:41937290-41937434:+|nuORF'] 120402 5806 VEELRKTNASP True H1975_Epitope_Rep2 1242.65681473474 1242.6557099358602 27.323 2 -0.7438167139776185 0.2300412377251016 1.0 ['CYP2C18|p.E285*|1|0.28|ENSG00000108242|chr10:94720426-94720427|-/T|frameshift_variant', 'nc|ENSG00000108242|P33260-2|CYP2C18', 'ENSG00000108242|ENST00000285979|CYP2C18'] 46298 16469 ISQEPDPVQRL True PC9_epitope_Rep5 1280.6724647988797 1280.6713699358602 68.347 2 -0.7438192895800557 0.2300412377251016 1.0 ['nc|ENSG00000106785|Q14142-4|TRIM14', 'nc|ENSG00000106785|Q14142-2|TRIM14', 'nc|ENSG00000106785|Q14142-3|TRIM14', 'ENSG00000106785|ENST00000341469|TRIM14'] 86602 5331 QLEHLHAG True NCI_RA007_Epitope_Rep2 903.45626445339 903.45516993586 25.356 2 -0.7438261571446618 0.2300412377251016 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 76871 6030 NRDLATPVM-[Oxidation] True PC9_epitope_Rep4 1031.50698007735 1031.50588993586 30.177 2 -0.7438503152757373 0.2300412377251016 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 119459 25644 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 106.18 1 -0.7438509327524192 0.2300412377251016 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 105748 7809 SSGERWIRY True H1975_Epitope_Rep1 1152.5676058075198 1152.56650993586 34.991 2 -0.743868805735535 0.2300412377251016 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 65863 18792 LSDLNQLV True PC9_epitope_Rep3 900.4916469025999 900.49054993586 77.508 2 -0.743881854976249 0.2300412377251016 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2'] 124145 18340 VGSRRVVQ True NCI_RA007_Epitope_Rep4 899.5300980999898 899.5295449679301 79.345 1 -0.7439395121391371 0.2300412377251016 1.0 ['ENSG00000170482|ENST00000348729|SLC23A1', 'nc|ENSG00000170482|Q9UHI7-2|SLC23A1'] 123414 7629 VGNDWEVL True PC9_epitope_Rep1 930.4446967101799 930.44358993586 34.166 2 -0.7439783157351525 0.2300412377251016 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant', 'ENST00000474202.1_1_12:40619397-40626186:+|nuORF'] 131536 22900 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 95.67 2 -0.7439905642102345 0.2300412377251016 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 2697 18874 AESWYQTKYEE True PC9_epitope_Rep5 1432.61467513924 1432.6135699358601 77.618 2 -0.7440053809246809 0.2300412377251016 1.0 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 25011 2373 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 12.514 2 -0.7440070729960488 0.2300412377251016 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 117438 14486 TVQDVLETYQK True NCI_RA007_Epitope_Rep4 1322.67179609254 1322.67068993586 63.073 2 -0.7440117119485188 0.2300412377251016 1.0 ['POMK|p.A324V|1|0.51|ENSG00000185900|chr8:43122795-43122795|C/T|missense_variant'] 71176 20615 LYNDYVDV True PC9_epitope_Rep3 999.4549270407099 999.45382993586 84.564 2 -0.7440147540141856 0.2300412377251016 1.0 ['ENST00000513085.1_1_5:95728707-95748688:-|nuORF', 'nc|ENSG00000175426|P29120-2|PCSK1', 'ENSG00000175426|ENST00000311106|PCSK1'] 113026 13817 TLNCCFDPFIY True H1975_Epitope_Rep2 1334.56753134814 1334.56642993586 58.294 2 -0.7440511043438742 0.2300412377251016 1.0 ['ENSG00000147145|ENST00000614823|LPAR4'] 73807 15931 NAIGVYGILT True PC9_epitope_Rep1 1019.56514619603 1019.56404993586 66.088 2 -0.7440584449345081 0.2300412377251016 1.0 ['NLRP8|p.E1003Gfs*22|1|0.17|ENSG00000179709|chr19:55979525-55979525|A/-|frameshift_variant', 'nc|ENSG00000179709|Q86W28-2|NLRP8', 'ENSG00000179709|ENST00000291971|NLRP8'] 112570 14335 TLEKIQFIS True PC9_epitope_Rep1 1077.6070110080097 1077.6059099358602 59.964 2 -0.7440663235763167 0.2300412377251016 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 89096 14918 QVPENYFY True H1975_Epitope_Rep2 1058.4709114580198 1058.4698099358602 62.534 2 -0.7440824833593995 0.2300412377251016 1.0 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENST00000538033.2_1_2:114353729-114354265:+|nuORF', 'ENST00000482170.6_1_X:155252010-155252984:+|nuORF', 'ENSG00000181404|ENST00000696149|WASHC1', 'ENST00000461007.6_1_X:155252382-155252984:+|nuORF'] 37396 6948 GVSSSQPI True PC9_epitope_Rep6 773.3919328613299 773.39082993586 35.671 2 -0.7441088561404918 0.2300412377251016 1.0 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'WNK1|p.L900Afs*27|1|0.06|ENSG00000060237|chr12:879896-879897|TC/-|frameshift_variant'] 57887 10764 LEFQGKNTFL True H1975_Epitope_Rep1 1195.62372370131 1195.62262993586 46.365 2 -0.7441212659605075 0.2300526589038048 1.0 ['ENSG00000143315|ENST00000368090|PIGM'] 66015 7152 LSEDSQPLPP True H1975_Epitope_Rep2 1081.5291546101298 1081.52804993586 32.445 2 -0.744181964464998 0.23006407974368104 1.0 ['ENST00000582963.1_1_17:37884964-37885057:-|nuORF'] 55283 20571 LADSISINL True PC9_epitope_Rep2 944.5178616504401 944.51731496793 84.56 1 -0.7442845680955787 0.2301165860749355 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2'] 109315 16960 TAYDLSSVI True NCI_RA007_Epitope_Rep2 967.48622716899 967.4856749679301 70.708 1 -0.7443020707240251 0.2301165860749355 1.0 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'ENST00000592516.1_1_19:11031622-11032430:+|nuORF'] 15401 7759 EAIQKWDK True NCI_RA007_Epitope_Rep2 1016.5290950404799 1016.52798993586 34.808 2 -0.744344831201593 0.23011776571445522 1.0 ['TTC33|p.E84K|1|0.19|ENSG00000113638|chr5:40730315-40730315|C/T|missense_variant'] 87317 3272 QPQSFSVGQPQ True H1975_Epitope_Rep3 1201.5727507576098 1201.57111490379 17.276 3 -0.7443733073300559 0.23011776571445522 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 122847 15279 VGGVTSAW True H1975_Epitope_Rep3 775.38645355807 775.3859049679301 64.179 1 -0.7444083976731717 0.23011776571445522 1.0 ['ENST00000377102.5_1_13:80913192-80913657:-|nuORF'] 65291 12370 LQYLERLYMKR True NCI_RA007_Epitope_Rep2 1511.8282542476297 1511.82714993586 52.721 2 -0.7444292498082447 0.23011776571445522 1.0 ['ENST00000560213.1_1_15:99796138-99796378:+|nuORF', 'ENST00000558500.5_1_15:99796138-99837514:+|nuORF', 'nc|ENSG00000168904|Q86X40-2|LRRC28', 'ENSG00000168904|ENST00000301981|LRRC28'] 87664 17142 QQSLEVILK True H1975_Epitope_Rep1 1056.6179100448799 1056.6168099358601 71.381 2 -0.7444707985060307 0.23012918440294855 1.0 ['nc|ENSG00000138735|O76074-2|PDE5A', 'ENSG00000138735|ENST00000354960|PDE5A', 'ENST00000508914.1_1_4:120473609-120484125:-|nuORF'] 3789 8286 AGTPPPRTPRP True NCI_RA007_Epitope_Rep1 1145.63054041725 1145.62944993586 36.231 2 -0.7444979366160248 0.23013836776461166 1.0 ['ENST00000587257.1_1_19:36426667-36427862:+|nuORF'] 112734 13027 TLGWEPGHL True PC9_epitope_Rep6 1008.5028802926399 1008.50178993586 61.692 2 -0.7445206144421067 0.23013836776461166 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 93516 5357 RQLDSTYFR True NCI_RA007_Epitope_Rep4 1184.59382055536 1184.59216490379 27.173 3 -0.7445218282958289 0.23013836776461166 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'ENST00000519421.1_1_8:101015243-101020719:-|nuORF'] 6991 7975 AQLLCSVYYLF True NCI_RA007_Epitope_Rep5 1318.6631459851399 1318.66204993586 37.364 2 -0.7445326136159938 0.23013836776461166 1.0 ['ENST00000521663.1_1_8:58192902-58193274:+|nuORF'] 23412 10084 EVSRPEPGAP True PC9_epitope_Rep3 1037.5141732523298 1037.5130699358601 43.742 2 -0.7445437615025355 0.23013836776461166 1.0 ['nc|ENSG00000244274|Q9BQY9-4|DBNDD2'] 104778 12959 SQWTRRRRRQP True NCI_RA007_Epitope_Rep1 1525.8450584836498 1525.84396993586 54.398 2 -0.7445683289079313 0.23013836776461166 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 131731 16269 VTPGMLLL True H1975_Epitope_Rep1 842.4935614789 842.4930149679301 67.929 1 -0.7446171345179561 0.23020345216204993 1.0 ['nc|ENSG00000137872|Q8NFY4-2|SEMA6D', 'nc|ENSG00000137872|Q8NFY4-5|SEMA6D'] 68928 4677 LTPCHGAL True PC9_epitope_Rep2 810.4058091036599 810.40470993586 23.36 2 -0.7446416367095273 0.23020345216204993 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 36349 17367 GVERRRTRPR True NCI_RA007_Epitope_Rep4 1281.74903284049 1281.7479299358602 75.212 2 -0.7446583735854727 0.23020345216204993 1.0 ['ENST00000308110.8_1_11:65628088-65628496:+|nuORF'] 84630 5661 QDFAYLSSWGP True NCI_RA007_Epitope_Rep5 1269.56660274801 1269.56550993586 28.463 2 -0.7446609709019596 0.23020345216204993 1.0 ['ENSG00000149654|ENST00000537909|CDH22'] 135939 19127 WPWLRWWQELW True PC9_epitope_Rep6 1684.83030285296 1684.82920993586 86.221 2 -0.744683606683109 0.23020345216204993 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 104777 12521 SQWTRRRRRQP True H1975_Epitope_Rep3 1525.8450584836498 1525.84396993586 53.359 2 -0.7446856451735223 0.23020345216204993 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 62327 15936 LLGFCMEP True PC9_epitope_Rep3 908.41359690604 908.41248993586 66.444 2 -0.7446996859704076 0.23020345216204993 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 4650 20202 ALAEEKHKAL True PC9_epitope_Rep4 1108.6240580544797 1108.62296993586 85.844 2 -0.7447242493224455 0.23020803985824226 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 42796 8893 IENQGVTDFK True NCI_RA007_Epitope_Rep1 1149.56660274801 1149.56550993586 38.593 2 -0.7447465956655147 0.23020803985824226 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant'] 44838 10575 INEHDYAKA True PC9_epitope_Rep6 1059.4985231881901 1059.49742993586 51.485 2 -0.7447725360287749 0.23020803985824226 1.0 ['ENSG00000104412|ENST00000220853|EMC2', 'ENST00000520294.5_1_8:109476316-109498824:+|nuORF'] 67292 16416 LSRVRCPV True PC9_epitope_Rep1 928.5276555718399 928.52654993586 67.967 2 -0.7448228004701208 0.23023428232502965 1.0 ['ENST00000604213.1_1_15:100257715-100257970:-|nuORF'] 131839 16552 VTQSKWLI True PC9_epitope_Rep6 973.5596668927699 973.55856993586 76.107 2 -0.7448382846200459 0.23024228225734705 1.0 ['ENST00000301919.8_1_11:105878863-105879127:-|nuORF'] 11536 9358 DFPMPFISA True PC9_epitope_Rep6 1023.47355431031 1023.47244993586 46.184 2 -0.7448433027333919 0.23024228225734705 1.0 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-9|FCAR', 'nc|ENSG00000186431|P24071-3|FCAR'] 3800 23040 AGTYEVRFFDE True PC9_epitope_Rep3 1332.59863115228 1332.5969849037901 93.891 3 -0.7448648539897923 0.23026510883103019 1.0 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 102811 5789 SNNKTKHIEEE True H1975_Epitope_Rep3 1327.63680756615 1327.6357099358602 27.291 2 -0.7448798491782912 0.23026510883103019 1.0 ['ENSG00000173702|ENST00000616727|MUC13'] 83237 10359 PSVYNPSL True H1975_Epitope_Rep1 875.4388830537499 875.43833496793 44.794 1 -0.7449444260793762 0.23029134850619024 1.0 ['ENST00000328089.10_1_1:9427712-9428249:+|nuORF'] 44556 5389 ILNSFEHEFLS True H1975_Epitope_Rep1 1334.65066672514 1334.6495699358602 25.786 2 -0.7450044184111211 0.23031758740325595 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 86733 12290 QLLCSMRWRTW True NCI_RA007_Epitope_Rep2 1478.7274946605398 1478.7263899358602 52.407 2 -0.7451087185361955 0.23032558415371843 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 27280 6545 FLQNQMLTL True NCI_RA007_Epitope_Rep5 1106.57941636118 1106.57830993586 31.838 2 -0.7451255301379794 0.23032558415371843 1.0 ['ENST00000379719.7_1_11:9446493-9446780:+|nuORF'] 120534 5549 VEFRNFKIIYR True NCI_RA007_Epitope_Rep1 1483.8299684997899 1483.8283349037902 25.655 3 -0.7451465062573942 0.23036323202372128 1.0 ['ENSG00000042753|ENST00000263270|AP2S1'] 43545 13653 IGQNKKVMIYR True NCI_RA007_Epitope_Rep2 1348.76492571508 1348.76382993586 57.748 2 -0.7451466901573297 0.23036323202372128 1.0 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 59561 19489 LFTMHSNGI True PC9_epitope_Rep1 1018.4906013567801 1018.48950993586 79.782 2 -0.74515316968915 0.23037922139532124 1.0 ['ENST00000558906.5_1_15:50152393-50311102:-|nuORF', 'ENST00000559726.5_1_15:50152393-50311102:-|nuORF', 'ENSG00000104043|ENST00000284509|ATP8B4'] 138442 9651 YHKWRIYYKKR True H1975_Epitope_Rep1 1639.9099501559897 1639.9088499358602 42.051 2 -0.7451816543051691 0.23037922139532124 1.0 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL', 'MLXIPL|p.P412Hfs*61|1|0.5|ENSG00000009950|chr7:73597550-73597550|G/-|frameshift_variant'] 98925 14456 SHADVVNLL True PC9_epitope_Rep6 966.51344497634 966.51234993586 67.493 2 -0.7452164272869402 0.23037922139532124 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion'] 43162 14481 IFEMLQERQP True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 60.811 3 -0.7452221092896751 0.23037922139532124 1.0 ['ENSG00000002746|ENST00000395891|HECW1', 'nc|ENSG00000002746|Q76N89-2|HECW1'] 112760 13304 TLHLSWMVT True PC9_epitope_Rep6 1086.55320161334 1086.55210993586 62.829 2 -0.7452408112161344 0.23039063079089764 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 74293 3952 NEKVPFNDTK True NCI_RA007_Epitope_Rep3 1190.59315184902 1190.59150490379 21.912 3 -0.7452617689205309 0.23039862430881894 1.0 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-3|PPP1R21', 'PPP1R21|p.Y359Ifs*3|1|0.15|ENSG00000162869|chr2:48471351-48471351|C/-|frameshift_variant', 'nc|ENSG00000162869|Q6ZMI0-4|PPP1R21'] 15730 16226 ECDDCDSC True PC9_epitope_Rep1 888.1935696015601 888.19246993586 67.232 2 -0.7452641053518763 0.23039862430881894 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 39863 10692 HPALSPQLS True PC9_epitope_Rep5 948.5028802926402 948.50178993586 46.117 2 -0.7452689572227494 0.23039978654333615 1.0 ['ENSG00000147234|ENST00000683843|FRMPD3'] 28384 9871 FRWWRRRWNPR True H1975_Epitope_Rep1 1714.9181638542595 1714.9165049037902 42.902 3 -0.7452755277516551 0.23039978654333615 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 39655 14114 HLPTERFSPVR True PC9_epitope_Rep3 1337.7204180508102 1337.71876490379 59.374 3 -0.7452784693898032 0.23039978654333615 1.0 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000488337.5_1_11:116730256-116740867:-|nuORF'] 103048 11981 SPFVVNVAP True H1975_Epitope_Rep2 928.5018176634799 928.50072993586 51.166 2 -0.7452985968876881 0.23039978654333615 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant', 'FLNC|p.P952S|1|0.15|ENSG00000128591|chr7:128843838-128843838|C/T|missense_variant'] 108912 17704 TAAYEQLK True PC9_epitope_Rep3 922.47599683846 922.47488993586 73.295 2 -0.7453961395118084 0.23042034742396394 1.0 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 43170 8575 IFFNNSFAL True PC9_epitope_Rep6 1071.53893144819 1071.5378299358601 42.766 2 -0.7454367584324391 0.23042034742396394 1.0 ['TCERG1L|p.M585*|1|0.24|ENSG00000176769|chr10:131093170-131093170|T/-|frameshift_variant', 'ENSG00000176769|ENST00000368642|TCERG1L', 'TCERG1L|p.H388Tfs*27|1|0.08|ENSG00000176769|chr10:131146533-131146533|G/-|frameshift_variant'] 14215 8616 DSEVSEESPC True NCI_RA007_Epitope_Rep3 1080.3917347308 1080.39062993586 40.967 2 -0.7454386050136387 0.23042034742396394 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 124140 4958 VGSRPIKLRK True PC9_epitope_Rep3 1152.74551059984 1152.7444099358602 24.165 2 -0.7454582870875488 0.23042034742396394 1.0 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 101620 9840 SLLREHSI True PC9_epitope_Rep1 953.5294293936499 953.52832993586 42.711 2 -0.7454989428639853 0.23042034742396394 1.0 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'ENST00000482096.1_1_2:238933991-238940949:+|nuORF', 'ENST00000449891.5_1_2:238903425-238973015:+|nuORF', 'ENST00000480828.5_1_2:238933952-238949976:+|nuORF'] 39672 9291 HLQVLMQN True PC9_epitope_Rep5 981.50658577409 981.5054899358599 40.688 2 -0.7455020992012306 0.23042034742396394 1.0 ['ENSG00000197479|ENST00000354757|PCDHB11', 'PCDHB11|p.Q115L|1|0.13|ENSG00000197479|chr5:141200118-141200118|A/T|missense_variant'] 102022 7490 SLQSNPLLPD True H1975_Epitope_Rep3 1082.5607890915799 1082.5596899358602 33.791 2 -0.7455065221215771 0.23042034742396394 1.0 ['ENSG00000143013|ENST00000370544|LMO4'] 54333 17594 KYEDLYAFSYN True H1975_Epitope_Rep1 1411.6295969273897 1411.6284899358602 73.207 2 -0.7455558298339783 0.23044315992292871 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 136667 6870 WWRYWWHYPIC True NCI_RA007_Epitope_Rep1 1694.76050904098 1694.75940993586 30.726 2 -0.7455935753380821 0.23044315992292871 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 66990 16354 LSPIFPGG True NCI_RA007_Epitope_Rep1 786.42759009406 786.4270449679301 67.725 1 -0.7457310739323129 0.23045115010671094 1.0 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN'] 41714 4909 IAKQGKAVL True NCI_RA007_Epitope_Rep3 926.5913013742198 926.59020993586 26.299 2 -0.7457409767607281 0.23045115010671094 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 141544 7234 YTMMGSEDH True H1975_Epitope_Rep3 1069.38448160573 1069.3833899358601 32.797 2 -0.7457487276683867 0.23046255539252739 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 120076 11314 VDTTAGSSHDP True H1975_Epitope_Rep3 1085.46253160229 1085.46142993586 48.625 2 -0.7457696133112494 0.23047054464616526 1.0 ['ENST00000560873.1_1_15:81201974-81241127:-|nuORF'] 80221 5034 PGAGPGDGPP True NCI_RA007_Epitope_Rep5 820.3715317699199 820.37042993586 26.065 2 -0.7457712119479928 0.23047054464616526 1.0 ['nc|ENSG00000188176|Q2TAL5-2|SMTNL2', 'ENSG00000188176|ENST00000389313|SMTNL2'] 17042 10236 EGERVELIALI True H1975_Epitope_Rep1 1240.7027022979998 1240.70160993586 44.316 2 -0.7457810828549911 0.23047853342620447 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 67677 5046 LSWEAQLRR True H1975_Epitope_Rep3 1157.63054041725 1157.62888490379 24.531 3 -0.7457830072990647 0.23047853342620447 1.0 ['ENST00000475306.1_1_1:24410803-24434643:-|nuORF', 'nc|ENSG00000142661|Q5VTT5-2|MYOM3', 'ENSG00000142661|ENST00000374434|MYOM3'] 101180 12355 SLGVCAYELL True PC9_epitope_Rep1 1066.53688284286 1066.53578993586 52.38 2 -0.7458205684868154 0.23048993746109844 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 58881 3948 LETAGVAR True PC9_epitope_Rep5 815.45011644379 815.44900993586 20.266 2 -0.7459432892011709 0.2305013411579899 1.0 ['ENST00000473515.5_1_6:108067761-108070999:-|nuORF'] 119912 18915 VDKYRLRRKFP True PC9_epitope_Rep6 1476.8677509908398 1476.86664993586 85.401 2 -0.7459685416709391 0.23052756372258448 1.0 ['ENSG00000100625|ENST00000216513|SIX4'] 112388 11451 TLASTFSNG True PC9_epitope_Rep2 896.4239612656 896.42286993586 49.365 2 -0.7460563957295155 0.23056860449608038 1.0 ['nc|ENSG00000125851|P16519-2|PCSK2', 'nc|ENSG00000125851|P16519-3|PCSK2', 'ENSG00000125851|ENST00000262545|PCSK2'] 57566 6874 LEDSLQAQ True H1975_Epitope_Rep3 902.4345259493 902.43342993586 31.4 2 -0.7460705965053259 0.230573172900243 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 45908 7310 ISEAMEGPPP True H1975_Epitope_Rep3 1026.4691972058597 1026.46808993586 33.09 2 -0.7461090192266236 0.230573172900243 1.0 ['ENST00000312990.10_1_12:58142143-58142311:-|nuORF'] 129951 25549 VRVGALLL True PC9_epitope_Rep1 839.5592729699499 839.5587249679301 103.28 1 -0.7461163912495158 0.230573172900243 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 79737 3891 PDYKQWKIE True H1975_Epitope_Rep3 1205.6080736371698 1205.60641490379 20.088 3 -0.7461592473217047 0.23058115757342262 1.0 ['ENST00000439282.1_1_1:109529720-109529831:-|nuORF'] 2115 19182 AELKKVLQQMK True H1975_Epitope_Rep3 1314.7693423891799 1314.76824993586 80.434 2 -0.7461713232614845 0.23058115757342262 1.0 ['nc|ENSG00000117155|Q9Y2D8-2|SSX2IP', 'nc|ENSG00000117155|Q9Y2D8-3|SSX2IP', 'ENSG00000117155|ENST00000342203|SSX2IP', 'ENST00000460500.1_1_1:85123956-85128195:-|nuORF'] 64933 3415 LQEFKEDIHNR True NCI_RA007_Epitope_Rep1 1427.7157265931899 1427.71408490379 17.183 3 -0.7461865112618418 0.23060395922238028 1.0 ['ENSG00000185222|ENST00000372661|TCEAL9'] 129110 7954 VQQILDSHQTK True H1975_Epitope_Rep1 1295.68336383575 1295.6822699358602 35.542 2 -0.7462031745499088 0.23060395922238028 1.0 ['CAMTA1|p.Y297Tfs*93|1|0.06|ENSG00000171735|chr1:7663430-7663430|G/-|frameshift_variant', 'CAMTA1|p.E535Rfs*28|1|0.31|ENSG00000171735|chr1:7664148-7664148|C/-|frameshift_variant', 'nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1', 'ENSG00000171735|ENST00000303635|CAMTA1'] 2449 9683 AEQKKWEEQHE True NCI_RA007_Epitope_Rep2 1440.66335666716 1440.66224993586 42.283 2 -0.7462123705684083 0.23061194251000147 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 43404 11768 IGEMAADI True PC9_epitope_Rep4 818.3844049527399 818.38330993586 53.033 2 -0.7462432639063745 0.23061194251000147 1.0 ['ENSG00000163116|ENST00000295268|STPG2'] 115892 17246 TSETIYSPDYY True H1975_Epitope_Rep2 1337.56632796449 1337.56522993586 71.628 2 -0.7462620771304458 0.23063815916196234 1.0 ['METTL18|p.N298S|1|0.18|ENSG00000171806|chr1:169792803-169792803|T/C|missense_variant'] 129738 16399 VRQGPGGLR True NCI_RA007_Epitope_Rep1 938.5409971368598 938.53990993586 67.901 2 -0.7463102267668326 0.23066095743262263 1.0 ['ENST00000571210.1_1_17:19287777-19288718:-|nuORF'] 105816 12404 SSLARGWILL True NCI_RA007_Epitope_Rep3 1114.6498788795 1114.6487899358601 55.997 2 -0.7463385769254903 0.23066095743262263 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B'] 120624 16143 VEIDGERIKI True PC9_epitope_Rep5 1170.66083748602 1170.65920490379 67.082 3 -0.7463736343646007 0.23066893843988442 1.0 ['ENSG00000172007|ENST00000305626|RAB33B'] 4834 12879 ALEISALK True PC9_epitope_Rep2 843.5065686907499 843.50546993586 54.837 2 -0.7463885267597773 0.23066893843988442 1.0 ['ENST00000490918.5_1_6:3138827-3138989:+|nuORF'] 126814 15241 VLPSLLST True NCI_RA007_Epitope_Rep5 828.4956696538801 828.49456993586 65.311 2 -0.746437099344677 0.23068033661254 1.0 ['ENST00000555923.1_1_14:81955203-81955461:-|nuORF'] 66705 6986 LSLENRELW True H1975_Epitope_Rep1 1158.6033226099 1158.6022299358601 31.909 2 -0.7464410340459932 0.2306814814814815 1.0 ['nc|ENSG00000149922|O95947-2|TBX6', 'ENSG00000149922|ENST00000395224|TBX6'] 120799 13563 VELHLAGT True NCI_RA007_Epitope_Rep1 838.45486747106 838.45376993586 56.767 2 -0.7464548675385295 0.2306814814814815 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 136591 9544 WWLRRYQQVRR True NCI_RA007_Epitope_Rep2 1645.90659611105 1645.9049549037902 41.738 3 -0.7464605826546628 0.2306814814814815 1.0 ['nc|nan|A6NJI1|C11orf86'] 60320 12661 LGSIDWEA True H1975_Epitope_Rep1 889.41814760917 889.4175949679301 53.754 1 -0.7464635445777423 0.2306814814814815 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|204|3|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|4', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|4', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|4', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|4', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|0|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|4', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|4'] 89153 8949 QVRDWSHYFKI True PC9_epitope_Rep1 1477.7466327986497 1477.74499490379 39.265 3 -0.7464743985563974 0.23069287862402038 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 33228 13197 GKDVLILGGG True PC9_epitope_Rep5 927.5389314481898 927.53782993586 55.769 2 -0.7464894543789061 0.230700857739656 1.0 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS'] 100096 14232 SISERIKFVP True PC9_epitope_Rep2 1174.6710082468999 1174.66990993586 60.01 2 -0.7465312994482006 0.230700857739656 1.0 ['ENSG00000179270|ENST00000331664|PCARE'] 17169 19279 EGRPPENKRS True PC9_epitope_Rep1 1168.59488318452 1168.59322490379 78.959 3 -0.7465450443176035 0.2307122540886466 1.0 ['ENST00000477448.1_1_6:107811820-107879187:+|nuORF', 'ENSG00000112320|ENST00000317357|SOBP'] 36237 9660 GVDFLQLP True H1975_Epitope_Rep2 887.4752685624699 887.47416993586 42.138 2 -0.7465713416030768 0.2307190994593794 1.0 ['ENSG00000089639|ENST00000203556|GMIP', 'nc|ENSG00000089639|Q9P107-2|GMIP'] 5771 15206 APAVVAIPG True PC9_epitope_Rep1 793.46978925921 793.46868993586 63.311 2 -0.746596066912195 0.2307190994593794 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 101 11418 AAAQYKFFIV True PC9_epitope_Rep5 1156.62808080576 1156.62643490379 48.919 3 -0.7466097386731213 0.2307190994593794 1.0 ['ENSG00000169413|ENST00000304677|RNASE6'] 64463 19808 LPPTLVSKDL True PC9_epitope_Rep2 1081.63831113629 1081.63720993586 81.581 2 -0.7466412340861885 0.2307190994593794 1.0 ['ENST00000370298.8_1_1:93544885-93544996:+|nuORF'] 33543 8091 GLEGSFGWG True NCI_RA007_Epitope_Rep2 908.4028318981998 908.40172993586 36.105 2 -0.7466527554301376 0.2307190994593794 1.0 ['ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 111772 12239 TIKEEGLVLQE True NCI_RA007_Epitope_Rep3 1257.6816325002499 1257.68052993586 55.289 2 -0.7466675168495164 0.2307190994593794 1.0 ['nc|ENSG00000182185|O15315-4|RAD51B', 'nc|ENSG00000182185|O15315|RAD51B'] 13685 18479 DPSITSILD True PC9_epitope_Rep1 959.48114178855 959.4805949679301 75.871 1 -0.746695555051845 0.2307190994593794 1.0 ['ENSG00000158516|ENST00000222481|CPA2'] 62351 15470 LLGLKKLSFYY True NCI_RA007_Epitope_Rep3 1343.78530972315 1343.7842099358602 68.408 2 -0.74669867507005 0.2307190994593794 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 102129 10632 SLRPGPMAL True PC9_epitope_Rep5 940.5164221818 940.51532993586 45.884 2 -0.7467237841721232 0.2307190994593794 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 10355 4553 CGDVNAKA True NCI_RA007_Epitope_Rep1 776.34868815036 776.34758993586 21.807 2 -0.7467891911322863 0.2307190994593794 1.0 ['nc|ENSG00000107104|Q14678-2|KANK1', 'ENSG00000107104|ENST00000382297|KANK1'] 3588 7042 AGNGWWWVP True H1975_Epitope_Rep3 1071.49264996211 1071.4915499358601 32.052 2 -0.7468277449312488 0.2307190994593794 1.0 ['ENSG00000143595|ENST00000324978|AQP10'] 58065 8949 LEINGVVYTG True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 39.779 2 -0.7468542757463178 0.23073049351264885 1.0 ['ENSG00000205143|ENST00000378909|ARID3C'] 56941 15972 LDQNISHQQAI True NCI_RA007_Epitope_Rep3 1265.6364136433301 1265.63530993586 70.498 2 -0.7469905122330193 0.23080113156686463 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ'] 13339 11972 DLVLLGKQA True H1975_Epitope_Rep3 955.5702315764698 955.56912993586 51.208 2 -0.7470586779619197 0.23082733493290677 1.0 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB'] 32386 18010 GFNPNQGF True PC9_epitope_Rep3 879.3875161872298 879.38640993586 74.479 2 -0.7470949862522972 0.2308387268768791 1.0 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000497368.1_1_7:157023781-157024027:+|nuORF'] 130559 19425 VSRKLSLVP True PC9_epitope_Rep3 997.6284151589299 997.62730993586 79.944 2 -0.747103720199722 0.23084669954532663 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 100621 5524 SLDDIQQAINR True PC9_epitope_Rep1 1271.64697832703 1271.64532490379 26.078 3 -0.7471114442914797 0.23084669954532663 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant', 'DNAH8|p.A1622Qfs*38|1|0.24|ENSG00000124721|chr6:38852742-38852742|G/-|frameshift_variant'] 74328 5891 NEMDIRNFQP True NCI_RA007_Epitope_Rep2 1262.57137085862 1262.57026993586 27.53 2 -0.7471253924413531 0.2308512528878621 1.0 ['nc|ENSG00000189180|Q06730|ZNF33A', 'ENSG00000189180|ENST00000432900|ZNF33A', 'nc|ENSG00000189180|Q06730-3|ZNF33A'] 79691 16883 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.4554749679301 69.953 1 -0.7471690990052298 0.2308512528878621 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 30504 7240 GAGGGGGR True H1975_Epitope_Rep1 587.2775718154301 587.2770249679301 32.86 1 -0.7471839367135739 0.2308512528878621 1.0 ['ENSG00000272333|ENST00000420124|KMT2B'] 42795 14458 IENNYQHSI True PC9_epitope_Rep3 1116.51998690876 1116.5188899358602 60.718 2 -0.7472071460146172 0.23086264346538318 1.0 ['nc|ENSG00000165186|Q96NR3-2|PTCHD1', 'ENSG00000165186|ENST00000379361|PTCHD1', 'PTCHD1|p.V718Wfs*5|1|0.47|ENSG00000165186|chrX:23393669-23393669|G/-|frameshift_variant'] 124569 17838 VGVRRVPPTR True NCI_RA007_Epitope_Rep3 1135.6938093801498 1135.69327496793 78.212 1 -0.7472583235661792 0.23090023249959277 1.0 ['ENST00000368039.2_1_1:160771789-160771924:+|nuORF'] 63693 13618 LMVQPAAP True H1975_Epitope_Rep3 825.4418602592099 825.4413149679301 57.669 1 -0.74726130228605 0.23090023249959277 1.0 ['MAGEL2|p.V991*|1|0.22|ENSG00000254585|chr15:23644773-23644773|G/-|frameshift_variant', 'ENSG00000254585|ENST00000650528|MAGEL2'] 43121 6844 IEYPLFFLLPD True H1975_Epitope_Rep3 1365.72204076025 1365.72040490379 31.283 3 -0.7472822822180571 0.23090249500259125 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|228|3|anti-sense'] 59056 4107 LEVTYRERL True NCI_RA007_Epitope_Rep5 1177.6455217750497 1177.64386490379 22.28 3 -0.7472988524430808 0.23090249500259125 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB', 'ENST00000567372.1_1_18:65945123-65945423:-|nuORF'] 59183 10137 LFCYLWSVP True PC9_epitope_Rep4 1126.55213898418 1126.55050490379 46.669 3 -0.7473411298472125 0.23090249500259125 1.0 ['ENSG00000257138|ENST00000547270|TAS2R38'] 134986 9206 WCQYQKEIMER True H1975_Epitope_Rep1 1512.6853550650396 1512.6842499358602 40.319 2 -0.7473849196470638 0.23090249500259125 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 111872 15373 TINLRNPVL True PC9_epitope_Rep5 1038.61857875122 1038.61748993586 64.142 2 -0.7474329087571225 0.23090249500259125 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF', 'ENSG00000105928|ENST00000645220|GSDME'] 106032 5625 SSYPVCVSK True NCI_RA007_Epitope_Rep3 968.4637179026 968.46262993586 29.116 2 -0.7474433824048091 0.23090249500259125 1.0 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1', 'ENST00000549820.1_1_12:113344820-113354315:+|nuORF'] 137009 16714 YALDALSP True PC9_epitope_Rep1 848.42798401688 848.42743496793 69.118 1 -0.7474434051658588 0.23090249500259125 1.0 ['ENST00000553027.1_1_12:49318338-49318461:-|nuORF', 'ENST00000546671.5_1_12:49317517-49318461:-|nuORF'] 71952 19603 MESLDGLHLP True H1975_Epitope_Rep3 1110.5379454720198 1110.5368499358601 82.128 2 -0.7475064119181618 0.23090249500259125 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 66646 9932 LSKPNEHLKVP True H1975_Epitope_Rep1 1260.71902106848 1260.7179299358602 43.139 2 -0.7475894194461468 0.2309115944389334 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 102577 18676 SLVYYFYNL True PC9_epitope_Rep5 1180.5804619069997 1180.57936993586 76.858 2 -0.7476008005399544 0.2309115944389334 1.0 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 136203 10528 WRRWNRFNRRR True NCI_RA007_Epitope_Rep5 1701.9301255202897 1701.9290299358602 47.13 2 -0.7476008788883419 0.2309115944389334 1.0 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 36557 5541 GVGYYSHEVGR True H1975_Epitope_Rep3 1222.5730851107799 1222.57198993586 26.363 2 -0.7476109538492379 0.2309115944389334 1.0 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 20096 20313 EMLDHTIQI True PC9_epitope_Rep3 1098.53794547202 1098.5368499358601 83.382 2 -0.7476285219458896 0.2309115944389334 1.0 ['ENST00000478571.1_1_1:186368103-186380944:+|nuORF', 'nc|ENSG00000157181|Q5SWX8-4|ODR4', 'nc|ENSG00000157181|Q5SWX8-2|ODR4', 'ENSG00000157181|ENST00000287859|ODR4'] 111775 9734 TIKFDLQVEH True PC9_epitope_Rep2 1228.6451874218799 1228.6435349037902 42.783 3 -0.7476288691614389 0.2309115944389334 1.0 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000556641.5_1_14:99959014-99967243:+|nuORF', 'ENST00000557165.5_1_14:99959014-99968584:+|nuORF'] 135535 19469 WKLQVLEMRD True NCI_RA007_Epitope_Rep5 1316.6910920684797 1316.6894549037902 81.776 3 -0.747676885582193 0.23093778685854727 1.0 ['ENSG00000279804|ENST00000624297|PRAMEF18', 'ENSG00000204480|ENST00000376101|PRAMEF19'] 65432 11208 LRGLLDQGI True PC9_epitope_Rep4 983.5763795860698 983.57528993586 50.888 2 -0.7477629656152727 0.23098674957435783 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 100913 7222 SLFARFQEKKG True NCI_RA007_Epitope_Rep1 1309.7142700412098 1309.7131699358602 32.081 2 -0.7477751387472077 0.23098674957435783 1.0 ['nc|ENSG00000089682|Q96IZ5-2|RBM41', 'nc|ENSG00000089682|Q96IZ5|RBM41', 'ENSG00000089682|ENST00000685964|RBM41'] 113141 5664 TLPKELTSDP True H1975_Epitope_Rep1 1099.57610480255 1099.5750099358602 26.856 2 -0.74778131290689 0.23098674957435783 1.0 ['ENSG00000179954|ENST00000389623|SSC5D'] 130217 8447 VSEVGVKGPPD True H1975_Epitope_Rep1 1082.5607890915799 1082.5596899358602 37.419 2 -0.7478302743886934 0.23099809055788273 1.0 ['PASD1|p.E734K|1|0.29|ENSG00000166049|chrX:151676021-151676021|G/A|missense_variant'] 64815 5783 LQDAEIAR True PC9_epitope_Rep3 914.4821448480599 914.48104993586 27.315 2 -0.7478411893818799 0.23099809055788273 1.0 ['ENSG00000197956|ENST00000368719|S100A6'] 130004 6617 VSAAAGDFK True NCI_RA007_Epitope_Rep2 864.43413202648 864.43302993586 30.348 2 -0.7478700172967646 0.23099809055788273 1.0 ['ENSG00000185053|ENST00000382080|SGCZ', 'nc|ENSG00000185053|Q96LD1|SGCZ', 'SGCZ|p.Q224H|2|0.17|ENSG00000185053|chr8:14102448-14102448|C/A|missense_variant'] 33552 13106 GLELERSELFK True H1975_Epitope_Rep3 1319.7085159544297 1319.7074099358601 55.657 2 -0.7478813056025914 0.23099809055788273 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 101634 6431 SLLRKHQERVQ True NCI_RA007_Epitope_Rep5 1392.7949799734001 1392.79333490379 31.405 3 -0.7478866064754682 0.23099809055788273 1.0 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000556340.1_1_9:139265151-139266545:-|nuORF', 'nc|ENSG00000289701|Q9H257-3|CARD9'] 58415 14266 LENVHMLY True PC9_epitope_Rep5 1017.49535238405 1017.49424993586 59.878 2 -0.7479082170931108 0.23099809055788273 1.0 ['nc|ENSG00000089123|Q9H6P5-3|TASP1', 'ENST00000480436.5_1_20:13415759-13610725:-|nuORF'] 83637 20510 PVDTRERGLK True PC9_epitope_Rep1 1169.6516697846498 1169.6500349037901 83.702 3 -0.7479164400479487 0.23099809055788273 1.0 ['ENSG00000274588|ENST00000611977|DGKK', 'DGKK|p.R206Efs*9|1|0.4|ENSG00000274588|chrX:50470064-50470064|G/-|frameshift_variant'] 79017 20287 PALAPIAA True NCI_RA007_Epitope_Rep2 722.4326754745 722.43212496793 83.943 1 -0.7479192306912948 0.23099809055788273 1.0 ['ENST00000555168.1_1_X:119270955-119378696:-|nuORF'] 38087 8285 HAVHEEDRGK True NCI_RA007_Epitope_Rep2 1176.5635830562398 1176.5624899358602 36.865 2 -0.7479199518992184 0.23099809055788273 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'ENST00000506361.5_1_3:123456168-123512688:-|nuORF'] 94040 24876 RRKRRIYES True NCI_RA007_Epitope_Rep5 1262.73198579402 1262.7308899358602 103.18 2 -0.7479487305182745 0.23099809055788273 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 421 16191 AALLKHTNL True PC9_epitope_Rep3 979.5814649665101 979.58036993586 67.418 2 -0.7479600367615243 0.23099809055788273 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant', 'ENST00000560983.1_1_15:64010754-64015453:-|nuORF'] 114344 24644 TPRRLTPVPG True PC9_epitope_Rep4 1092.64037682496 1092.63987496793 103.29 1 -0.7479666408325001 0.23099809055788273 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295', 'nc|ENSG00000166004|Q9C0D2-4|CEP295', 'nc|ENSG00000166004|Q9C0D2-2|CEP295'] 26728 9780 FIYAWLHDSFR True H1975_Epitope_Rep3 1453.7142700412098 1453.7131699358602 42.641 2 -0.7479699344258316 0.23099809055788273 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 529 4428 AAPLPQKVP True NCI_RA007_Epitope_Rep4 919.5491022090699 919.54800993586 23.394 2 -0.7479734344558614 0.23099809055788273 1.0 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'ENST00000518375.1_1_8:105502903-105507508:-|nuORF'] 92732 25177 RNWLLREF True PC9_epitope_Rep1 1132.6141620771198 1132.61306993586 101.73 2 -0.7479917604316577 0.23100605378842823 1.0 ['ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8', 'ENST00000460539.5_1_2:172188347-172248586:-|nuORF'] 57834 11282 LEETVAREL True NCI_RA007_Epitope_Rep1 1058.5607890915799 1058.5596899358602 47.866 2 -0.7480026285352859 0.23100605378842823 1.0 ['ENSG00000155980|ENST00000455537|KIF5A'] 116618 23594 TVAFPSTH True H1975_Epitope_Rep1 858.42356734278 858.42301496793 97.99 1 -0.7480518694341298 0.23102197883519573 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 38118 8267 HCCRGTWWR True PC9_epitope_Rep4 1203.5178362474699 1203.5167299358602 39.259 2 -0.7480939903732311 0.23102197883519573 1.0 ['ENST00000480550.1_1_20:19998040-20007434:+|nuORF'] 19048 6874 ELFLDHNDLK True NCI_RA007_Epitope_Rep2 1242.6244519773002 1242.62334993586 31.354 2 -0.748104899304258 0.23102197883519573 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2'] 72609 13885 M[Oxidation]LTWRSSL True PC9_epitope_Rep2 1008.50625180136 1008.50514993586 58.689 2 -0.7481267143408912 0.23102197883519573 1.0 ['MXRA8|p.R301Gfs*107|1|0.45|ENSG00000162576|chr1:1354730-1354730|G/-|frameshift_variant'] 92808 18192 RPAPARLALR True NCI_RA007_Epitope_Rep4 1119.6988947605898 1119.69778993586 78.726 2 -0.7481369071382415 0.23102994065150148 1.0 ['ENST00000211379.9_1_6:31619532-31620470:-|nuORF', 'ENST00000375964.10_1_6:31619532-31620470:-|nuORF'] 123657 9899 VGQPAVAGLS True PC9_epitope_Rep2 897.4919812557699 897.4914349679301 43.408 1 -0.7481499780830501 0.23102994065150148 1.0 ['ENST00000470411.2_1_16:624643-626255:+|nuORF'] 98229 18976 SETVVKPM True PC9_epitope_Rep1 889.4579042461698 889.45680993586 77.777 2 -0.7481783582310761 0.23105612124082406 1.0 ['ENSG00000128833|ENST00000261839|MYO5C', 'nc|ENSG00000128833|Q9NQX4-2|MYO5C', 'MYO5C|p.S381I|1|0.08|ENSG00000128833|chr15:52261033-52261033|C/A|missense_variant', 'ENST00000560809.5_1_15:52548900-52557395:-|nuORF', 'ENST00000558902.5_1_15:52548900-52571163:-|nuORF'] 129034 5100 VQMYAHTHLR True NCI_RA007_Epitope_Rep5 1254.6291605182598 1254.62752490379 26.314 3 -0.7483114163557405 0.23107204167406617 1.0 ['nc|ENSG00000141556|Q9BTW9-4|TBCD'] 46542 8068 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 37.722 2 -0.7483168192606309 0.23107204167406617 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 19802 20889 ELSLTLNAL True PC9_epitope_Rep4 972.54916177872 972.54806993586 88.507 2 -0.7483264023945567 0.23107204167406617 1.0 ['PCDHB3|p.T213N|1|0.16|ENSG00000113205|chr5:141101287-141101287|C/A|missense_variant'] 73169 5524 MRTVSGNQEK True H1975_Epitope_Rep1 1148.56080617492 1148.5597099358602 26.311 2 -0.7483340806820821 0.23107204167406617 1.0 ['ENST00000372626.7_1_X:102883675-102884824:+|nuORF'] 30112 14944 FYLHIISL True PC9_epitope_Rep2 1004.5695033004799 1004.56840993586 62.742 2 -0.748367682259062 0.23109821970313588 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-2|MBOAT1'] 64182 10469 LPGDKGELGP True H1975_Epitope_Rep1 981.5131106231698 981.51200993586 45.224 2 -0.7484109235227563 0.23112439695740966 1.0 ['ENST00000481800.1_1_20:61463177-61467329:+|nuORF', 'ENST00000472880.1_1_20:61464332-61467329:+|nuORF', 'ENST00000462700.5_1_20:61464332-61468449:+|nuORF', 'ENST00000469852.5_1_20:61463352-61467329:+|nuORF', 'ENST00000469802.5_1_20:61464332-61467763:+|nuORF', 'ENST00000466192.5_1_20:61463352-61472081:+|nuORF', 'ENSG00000092758|ENST00000649368|COL9A3'] 129955 25645 VRVGALLL True PC9_epitope_Rep5 839.5592729699499 839.5587249679301 103.98 1 -0.7484152521238228 0.23112893440075766 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 91027 22953 RFHVLKMLLNL True PC9_epitope_Rep4 1382.8220466683797 1382.8204049037902 96.509 3 -0.7484298873748563 0.23112893440075766 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 127713 9491 VPAPLGETH True PC9_epitope_Rep4 919.4763311916302 919.4752299358599 44.12 2 -0.748453615166154 0.23112893440075766 1.0 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-4|MTCL2'] 44557 5483 ILNSFEHEFLS True H1975_Epitope_Rep1 1334.65066672514 1334.6495699358602 26.151 2 -0.7485267352955505 0.2311482687185558 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 25009 1922 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 10.147 2 -0.7485284817331255 0.2311482687185558 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140458 24930 YRHRRKYF True PC9_epitope_Rep2 1224.6628436050398 1224.6617499358601 101.56 2 -0.7485495118733518 0.2311482687185558 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 115801 4653 TSDKKEVP True NCI_RA007_Epitope_Rep5 902.4709114580198 902.46980993586 24.581 2 -0.748578552742788 0.23115622503033353 1.0 ['ATF2|p.E148K|1|0.2|ENSG00000115966|chr2:175117995-175117995|C/T|missense_variant'] 138734 21828 YIRAGTRRP True PC9_epitope_Rep3 1088.6203100867199 1088.61920993586 89.262 2 -0.7486127883929627 0.23115622503033353 1.0 ['ENST00000254958.9_1_20:10654138-10654354:-|nuORF'] 117871 6934 TVYSPGFPSP True H1975_Epitope_Rep1 1050.5022115862998 1050.50110993586 31.715 2 -0.7486946058976333 0.23121994525412443 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2', 'nc|ENSG00000121904|Q7Z408-2|CSMD2'] 121358 6053 VEVKIEEP True NCI_RA007_Epitope_Rep2 941.5069626135698 941.50586993586 28.149 2 -0.7487094568278767 0.23121994525412443 1.0 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 136647 14627 WWRRRTQKRPV True H1975_Epitope_Rep1 1567.8960314273497 1567.89492993586 61.472 2 -0.7487139121699516 0.23121994525412443 1.0 ['nc|ENSG00000263639|P08118-2|MSMB'] 49593 10345 KFYMWFYFFIK True NCI_RA007_Epitope_Rep2 1618.8046652687397 1618.80301490379 44.829 3 -0.7487433929060157 0.23122789885628894 1.0 ['ENST00000498257.5_1_6:129811877-129812174:+|nuORF'] 28009 20533 FQLYLRCLVL True PC9_epitope_Rep4 1266.71585026434 1266.71474993586 87.13 2 -0.748790118996448 0.23122789885628894 1.0 ['ENST00000219252.9_1_16:57505336-57505453:+|nuORF'] 89643 11923 QYSVVVEEVP True PC9_epitope_Rep1 1147.57610480255 1147.5744449037902 50.727 3 -0.7487976781108929 0.23123927324377108 1.0 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2'] 11535 9928 DFPMPFISA True PC9_epitope_Rep4 1023.47355431031 1023.47244993586 45.839 2 -0.7488424599869261 0.23126202100902502 1.0 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-9|FCAR', 'nc|ENSG00000186431|P24071-3|FCAR'] 55126 6501 LAADPSHP True NCI_RA007_Epitope_Rep4 806.3922672145 806.39116993586 31.611 2 -0.7488786865642676 0.23126202100902502 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 135429 4371 WHMKRWEYFI True PC9_epitope_Rep6 1494.7230609031 1494.72142490379 23.907 3 -0.7489311730202318 0.23131435672860692 1.0 ['F5|p.R345W|1|0.11|ENSG00000198734|chr1:169555267-169555267|G/A|missense_variant'] 136992 13699 YAKHTKQSL True PC9_epitope_Rep4 1074.5821932425 1074.58108993586 60.581 2 -0.7489678790490671 0.23131435672860692 1.0 ['ENSG00000125656|ENST00000245816|CLPP'] 60098 9127 LGLSMQRNLNS True PC9_epitope_Rep4 1231.63430546835 1231.63264490379 42.693 3 -0.749068976608143 0.23134725755872435 1.0 ['ENST00000296487.8_2_3:52280242-52280808:+|nuORF'] 105366 17402 SRRKSLPS True NCI_RA007_Epitope_Rep5 929.5406627836899 929.53956993586 73.718 2 -0.7490803348176641 0.23134725755872435 1.0 ['nc|ENSG00000101082|Q9H6Q3-2|SLA2', 'ENSG00000101082|ENST00000262866|SLA2'] 113155 11390 TLPPEKLPW True NCI_RA007_Epitope_Rep3 1079.6015317047497 1079.6004299358601 51.924 2 -0.7491024068969854 0.23134725755872435 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 139392 25117 YLNKILLG True NCI_RA007_Epitope_Rep1 932.5695033004799 932.56840993586 103.94 2 -0.7491298347687166 0.23134725755872435 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 4973 9063 ALGSERLSP True PC9_epitope_Rep2 928.4977949121999 928.49668993586 40.206 2 -0.7491686981763298 0.23134725755872435 1.0 ['ENST00000417736.2_1_18:12308439-12326126:+|nuORF'] 128343 6892 VPQGSAVLTG True H1975_Epitope_Rep3 927.5025459394699 927.50144993586 31.469 2 -0.7491861476308684 0.23134725755872435 1.0 ['ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000223731|Q3ZLR7|SUPT20HL1'] 5772 12886 APCGQGVRTSL True H1975_Epitope_Rep1 1087.54442783479 1087.5433299358601 54.638 2 -0.7491951410383303 0.23134725755872435 1.0 ['THSD7B|p.R1208S|1|0.47|ENSG00000144229|chr2:137618444-137618444|G/C|missense_variant'] 11439 5618 DEYEAHQERVL True H1975_Epitope_Rep1 1387.6368075661499 1387.6351649037902 26.676 3 -0.749211616124895 0.23134725755872435 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF', 'ENSG00000121481|ENST00000367510|RNF2'] 28294 4308 FRQFLFYRHCR True NCI_RA007_Epitope_Rep2 1571.7932061515899 1571.7915749037902 21.397 3 -0.7492419538753784 0.23134725755872435 1.0 ['ENSG00000156966|ENST00000287590|B3GNT7'] 132120 5965 VTVDRLTP True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 29.629 2 -0.7493139696037264 0.23134725755872435 1.0 ['ENST00000394703.9_1_7:86781924-86783740:+|nuORF'] 38294 6264 HEFLFHYFGSY True NCI_RA007_Epitope_Rep1 1445.6404363946099 1445.63878490379 28.396 3 -0.7493167106714465 0.23134725755872435 1.0 ['ARSF|p.C449F|1|0.45|ENSG00000062096|chrX:3110208-3110208|G/T|missense_variant'] 122880 5135 VGHLRVRRFWS True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 25.129 3 -0.7493175443275428 0.23134725755872435 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 96297 13234 RYRNLWEHYYK True H1975_Epitope_Rep3 1626.8055446571 1626.80444993586 56.16 2 -0.7493503893145851 0.23136999674585096 1.0 ['ENSG00000113966|ENST00000463745|ARL6', 'nc|ENSG00000113966|Q9H0F7-2|ARL6'] 69554 14482 LVDDSEDP True PC9_epitope_Rep1 888.3712569864 888.37014993586 60.53 2 -0.7493669665931897 0.23136999674585096 1.0 ['nc|ENSG00000123106|Q7Z6B0-3|CCDC91', 'nc|ENSG00000123106|Q7Z6B0-2|CCDC91', 'ENST00000535520.5_1_12:28412355-28702103:+|nuORF', 'ENSG00000123106|ENST00000536442|CCDC91', 'ENST00000540401.5_1_12:28421609-28702103:+|nuORF'] 101466 13211 SLLARKFP True PC9_epitope_Rep2 930.56508662638 930.56398993586 56.095 2 -0.7493949320081765 0.23137794343864632 1.0 ['ENSG00000163440|ENST00000295645|PDCL2'] 110737 14377 TGGGGGGD True NCI_RA007_Epitope_Rep1 576.21396849936 576.2134249679301 59.965 1 -0.7493996558204441 0.23137794343864632 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 66488 15540 LSHDNMEEKVP True PC9_epitope_Rep1 1297.59725125329 1297.59614993586 64.599 2 -0.7494937370519968 0.231379045139916 1.0 ['ENSG00000204569|ENST00000376511|PPP1R10', 'ENST00000496955.1_1_6:30571493-30571981:-|nuORF'] 26684 14943 FITHLFKCK True PC9_epitope_Rep5 1135.6212216035099 1135.61956490379 62.482 3 -0.7494940256436886 0.231379045139916 1.0 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 44630 14570 ILRRQLHWPV True PC9_epitope_Rep3 1316.78295873772 1316.7818699358602 61.171 2 -0.749508070954047 0.231379045139916 1.0 ['PCSK5|p.Q1534Afs*34|1|0.2|ENSG00000099139|chr9:76332540-76332541|-/G|frameshift_variant'] 76865 7126 NRDLATPVM-[Oxidation] True PC9_epitope_Rep1 1031.50698007735 1031.50588993586 32.219 2 -0.7495145864937389 0.231379045139916 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 39682 15386 HLRRSLKTI True PC9_epitope_Rep5 1122.69856040742 1122.69691490379 64.191 3 -0.7495519594290392 0.23138014671083768 1.0 ['ENSG00000130158|ENST00000294618|DOCK6'] 20844 16424 EQIVTVNDHKR True H1975_Epitope_Rep1 1337.7051619094898 1337.7040699358602 68.535 2 -0.7495625812645338 0.23138014671083768 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'nc|ENSG00000166912|Q9NXD2-3|MTMR10'] 115329 14036 TRIGLETSL True PC9_epitope_Rep2 988.55530978832 988.55420993586 59.268 2 -0.7495627611820666 0.23138014671083768 1.0 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 122879 5047 VGHLRVRRFWS True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 24.781 3 -0.7496078207130163 0.23138014671083768 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 121114 8473 VERLGLHRQCR True NCI_RA007_Epitope_Rep1 1365.74117057873 1365.73951490379 36.956 3 -0.749649416587333 0.23139151396838073 1.0 ['ENST00000377996.5_1_9:35846336-35847153:+|nuORF'] 137055 3183 YANGGKAA True NCI_RA007_Epitope_Rep4 750.36605246666 750.36494993586 17.785 2 -0.7497268543483204 0.2314472477742613 1.0 ['nc|ENSG00000180846|Q8NCQ2|CSNK1G2-AS1'] 130850 11841 VTAWGRSERWP True NCI_RA007_Epitope_Rep2 1343.6734678583898 1343.6723699358602 50.66 2 -0.7498577572201038 0.23148476782017155 1.0 ['ENST00000585629.1_1_18:58330357-58331131:+|nuORF'] 18816 15633 ELDLEKLREES True NCI_RA007_Epitope_Rep1 1359.68817443267 1359.68706993586 64.9 2 -0.7498650272708207 0.23148476782017155 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17'] 61302 9223 LIQGEEYSFR True PC9_epitope_Rep4 1240.60880191316 1240.60714490379 43.074 3 -0.7499153651927047 0.23149613285813578 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 46877 8063 ITLEDYEQAAK True NCI_RA007_Epitope_Rep1 1279.62959692739 1279.6284899358602 35.361 2 -0.7501471792547381 0.23156774021825924 1.0 ['nc|ENSG00000133805|Q01432-3|AMPD3', 'ENSG00000133805|ENST00000396553|AMPD3', 'nc|ENSG00000133805|Q01432-5|AMPD3', 'nc|ENSG00000133805|Q01432-4|AMPD3', 'nc|ENSG00000133805|Q01432-2|AMPD3', 'AMPD3|p.I228Hfs*6|1|0.22|ENSG00000133805|chr11:10484904-10484905|-/G|frameshift_variant'] 61584 10488 LKKKRGHKRRR True PC9_epitope_Rep6 1461.9593003902498 1461.9582099358602 51.111 2 -0.7501526398087608 0.23156774021825924 1.0 ['KAT6B|p.R1135H|1|0.26|ENSG00000156650|chr10:75024989-75024989|G/A|missense_variant'] 79736 3612 PDYKQWKIE True H1975_Epitope_Rep3 1205.6080736371698 1205.60641490379 18.911 3 -0.7501613793141497 0.23156774021825924 1.0 ['ENST00000439282.1_1_1:109529720-109529831:-|nuORF'] 62523 8639 LLIWFKREFPF True NCI_RA007_Epitope_Rep2 1494.8387422783396 1494.83764993586 38.25 2 -0.7501726779868576 0.23156774021825924 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF', 'ENST00000600354.1_1_19:50390695-50391878:+|nuORF'] 18733 20599 ELASLCLANM True PC9_epitope_Rep1 1063.5042028155901 1063.50310993586 84.049 2 -0.7501735995888266 0.23156774021825924 1.0 ['ARMC3|p.F128L|1|0.13|ENSG00000165309|chr10:22959421-22959421|T/A|missense_variant'] 81597 21044 PLLAALLQ True PC9_epitope_Rep5 837.5323895157701 837.53128993586 86.005 2 -0.7503939840027015 0.23165178307410256 1.0 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2'] 129817 27245 VRRLPGGG True PC9_epitope_Rep2 810.4824196315798 810.48132993586 112.56 2 -0.7504214426657114 0.23165178307410256 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 30819 6084 GAPCSSPGPSL True PC9_epitope_Rep2 971.43823143075 971.43712993586 28.794 2 -0.7504390184275246 0.23165178307410256 1.0 ['nc|ENSG00000167608|Q7Z404|TMC4'] 62340 18576 LLGHKTVF True PC9_epitope_Rep3 913.53853752537 913.53744993586 76.679 2 -0.750467020776242 0.23165178307410256 1.0 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF'] 36226 7296 GVDAGDVR True H1975_Epitope_Rep3 787.38243080679 787.3818849679301 33.039 1 -0.7504716211691709 0.23165178307410256 1.0 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF', 'ENST00000320442.8_1_12:58014065-58016599:+|nuORF'] 60982 68 LIEATVIALTK True H1975_Epitope_Rep1 1170.72237511342 1170.72073490379 0.35833 3 -0.7504763871929566 0.23165178307410256 1.0 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 18862 9244 ELDRESWVREK True NCI_RA007_Epitope_Rep2 1445.72629127689 1445.72518993586 40.569 2 -0.7504784731249101 0.23165178307410256 1.0 ['ENSG00000197261|ENST00000529246|C6orf141'] 123753 17107 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 72.572 1 -0.750486145021678 0.23165178307410256 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 125025 9588 VIDAKFETKAR True H1975_Epitope_Rep1 1276.71393568804 1276.71282993586 41.805 2 -0.7504865796240183 0.23165178307410256 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'nc|ENSG00000085224|P46100-6|ATRX'] 44549 19482 ILNKNQSLL True PC9_epitope_Rep5 1041.61824439805 1041.6171499358602 79.99 2 -0.7505203800877922 0.23165178307410256 1.0 ['ENSG00000124214|ENST00000371856|STAU1'] 89958 6939 RDEYRREYEKR True NCI_RA007_Epitope_Rep1 1598.7913511449394 1598.78971490379 30.994 3 -0.7505411627141786 0.23167792776143234 1.0 ['PPARGC1A|p.E648D|1|0.08|ENSG00000109819|chr4:23812822-23812822|T/G|missense_variant'] 120874 5999 VEMYDLRWDRW True NCI_RA007_Epitope_Rep2 1567.7241831019098 1567.7225249037901 27.945 3 -0.7505944626414693 0.23170064607696744 1.0 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 39686 4736 HLSCLGLGKRP True NCI_RA007_Epitope_Rep2 1179.65464699011 1179.65299490379 23.052 3 -0.750609938187357 0.23170064607696744 1.0 ['ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-4|NSD2', 'nc|ENSG00000109685|O96028-2|NSD2', 'ENST00000353275.9_2_4:1944147-1980633:+|nuORF'] 13733 4162 DQAFGDWLL True H1975_Epitope_Rep2 1063.4974605590298 1063.49636993586 21.11 2 -0.7506622832299593 0.2317085791162165 1.0 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 44447 12210 ILINDRNTV True PC9_epitope_Rep2 1056.5927579262002 1056.5916699358602 52.277 2 -0.7506658950862941 0.2317085791162165 1.0 ['TECTA|p.D2032Ifs*79|1|0.16|ENSG00000109927|chr11:121187923-121187923|G/-|frameshift_variant', 'ENSG00000109927|ENST00000392793|TECTA'] 33484 6691 GLAVHDIAEK True NCI_RA007_Epitope_Rep1 1051.56620882519 1051.5651099358602 30.037 2 -0.7506735392916566 0.23171651168635335 1.0 ['ENST00000529654.5_1_8:145616841-145618286:+|nuORF', 'ENSG00000173137|ENST00000308860|ADCK5'] 96321 5855 RYSIYRDLWER True H1975_Epitope_Rep1 1555.7895602397896 1555.78792490379 27.591 3 -0.7507106314893325 0.23171651168635335 1.0 ['ENSG00000170892|ENST00000396388|TSEN34'] 131799 10337 VTQFPDYPG True PC9_epitope_Rep1 1022.4709114580198 1022.4698099358601 44.643 2 -0.7507510801170719 0.23172552439799554 1.0 ['ENST00000476039.1_1_7:107582891-107594053:-|nuORF'] 25570 8575 FEKLHCPEA True PC9_epitope_Rep6 1072.5011660404798 1072.5000699358602 42.766 2 -0.7507704976062318 0.23172552439799554 1.0 ['nc|ENSG00000197168|Q6P3R8|NEK5', 'ENSG00000197168|ENST00000684899|NEK5'] 61171 10216 LILAVAGSLP True H1975_Epitope_Rep1 952.5957180483199 952.59462993586 44.237 2 -0.7507890804800074 0.23172552439799554 1.0 ['ENST00000512816.1_1_5:139030646-139060149:+|nuORF'] 41545 13116 HYRFRMKQ True PC9_epitope_Rep4 1164.5974664671598 1164.5963699358601 58.345 2 -0.7507928259772444 0.23172552439799554 1.0 ['nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 37109 14195 GVPSTPLILQR True PC9_epitope_Rep4 1179.6975573479099 1179.69592490379 62.507 3 -0.7507941781579764 0.23172552439799554 1.0 ['SDK1|p.E1371Q|1|0.21|ENSG00000146555|chr7:4130079-4130079|G/C|missense_variant'] 2696 18964 AESWYQTKYEE True PC9_epitope_Rep3 1432.61467513924 1432.6135699358601 78.169 2 -0.750838656767651 0.23172552439799554 1.0 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q5XQN5', 'CON__Q922U2'] 10687 6096 CQSYIWIGEEY True H1975_Epitope_Rep3 1389.5911032436898 1389.58945490379 28.46 3 -0.7508444886384815 0.23174823727661084 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 46879 4970 ITLELSCCKY True H1975_Epitope_Rep2 1171.5617176917099 1171.56007490379 24.201 3 -0.7508586300576556 0.23174823727661084 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'ENST00000546912.1_1_12:69260670-69264157:-|nuORF', 'ENSG00000135678|ENST00000551568|CPM'] 122882 4706 VGHLRVRRFWS True PC9_epitope_Rep6 1411.79492040375 1411.79326490379 25.494 3 -0.7509810878494495 0.2317595932123219 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 41861 12155 IAYRKAVP True PC9_epitope_Rep3 916.5494365622399 916.54832993586 51.792 2 -0.7511133644779284 0.23178573012283268 1.0 ['ENST00000573617.1_1_16:3493766-3498541:+|nuORF', 'ENST00000572169.5_2_16:3493766-3526228:+|nuORF', 'nc|ENSG00000122390|Q9H7X0-2|NAA60'] 102703 10751 SLYYHIRMSKM True PC9_epitope_Rep6 1427.70536223363 1427.70426993586 52.178 2 -0.7511495180125939 0.2317936590052472 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 29994 12527 FWWWQDNWLWH True NCI_RA007_Epitope_Rep1 1702.7469671518197 1702.7458699358601 52.706 2 -0.7511495838789456 0.2317936590052472 1.0 ['ENST00000431490.1_1_3:45201441-45201549:-|nuORF'] 86169 17806 QIEFIIKQL True PC9_epitope_Rep5 1130.6699456177398 1130.6688499358602 73.51 2 -0.7512360838448394 0.2318095153638097 1.0 ['nc|ENSG00000135931|Q7Z3E5-2|ARMC9', 'ENSG00000135931|ENST00000611582|ARMC9'] 64747 17259 LPYQRRYRERR True NCI_RA007_Epitope_Rep2 1591.88077528603 1591.8796699358602 71.87 2 -0.7512393002890795 0.2318095153638097 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 67480 5734 LSSSSHGVP True PC9_epitope_Rep3 869.42429561877 869.42318993586 27.129 2 -0.7512616489677153 0.2318095153638097 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 37610 9366 GVVSPQPH True PC9_epitope_Rep2 819.42390169595 819.42280993586 41.361 2 -0.7512717461241546 0.2318095153638097 1.0 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'ENSG00000134313|ENST00000256707|KIDINS220', 'nc|ENSG00000134313|Q9ULH0-2|KIDINS220', 'ENST00000488729.5_1_2:8870852-8965899:-|nuORF'] 124570 18655 VGVRRVPPTR True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.69327496793 78.567 1 -0.7513675421581898 0.23184700196568186 1.0 ['ENST00000368039.2_1_1:160771789-160771924:+|nuORF'] 18288 13830 EIRNAFDL True PC9_epitope_Rep3 976.4977949121999 976.49668993586 58.278 2 -0.7513752059925718 0.23184700196568186 1.0 ['ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 120217 11556 VEARLRLE True PC9_epitope_Rep3 984.5716285587998 984.57052993586 49.464 2 -0.7514735029292882 0.23191747214093583 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.V841Cfs*5|1|0.1|ENSG00000155897|chr8:130836431-130836431|C/-|frameshift_variant'] 43155 6278 IFDYLLHQYSK True H1975_Epitope_Rep1 1425.7292513990099 1425.72760490379 29.216 3 -0.7515272164773628 0.23192882372936466 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 68869 6734 LTMYFQQYWR True NCI_RA007_Epitope_Rep1 1434.6754420043399 1434.67378490379 30.205 3 -0.7516178628763123 0.23193781495219376 1.0 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3', 'GABRB3|p.H132Afs*15|1|0.23|ENSG00000166206|chr15:26621382-26621383|-/A|frameshift_variant'] 123652 14868 VGQLPDSSLK True H1975_Epitope_Rep3 1042.5658744720201 1042.56476993586 62.574 2 -0.7517026131576527 0.23193781495219376 1.0 ['ENSG00000138678|ENST00000264409|GPAT3'] 76872 6112 NRDLATPVM-[Oxidation] True PC9_epitope_Rep4 1031.50698007735 1031.50588993586 30.519 2 -0.7517076803913054 0.23193781495219376 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 10459 22881 CIKWRRRRRRR True PC9_epitope_Rep4 1640.9858665745999 1640.98423490379 96.229 3 -0.7517172021615808 0.23193781495219376 1.0 ['ENST00000303961.8_1_19:41306371-41306464:+|nuORF'] 19220 8227 ELIPIPADSP True H1975_Epitope_Rep2 1050.55972646242 1050.5586299358602 36.596 2 -0.7517351620666176 0.23193781495219376 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 100422 14519 SLADVILLQT True PC9_epitope_Rep6 1071.6175756917098 1071.61646993586 67.732 2 -0.7517666655656686 0.23193781495219376 1.0 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 43092 16411 IEVYKLKQLKQ True NCI_RA007_Epitope_Rep1 1388.8391362011596 1388.83802993586 67.949 2 -0.7517832312881237 0.23194680458071665 1.0 ['ENSG00000138231|ENST00000260803|DBR1', 'DBR1|p.T496Lfs*10|1|0.24|ENSG00000138231|chr3:138162039-138162039|C/-|frameshift_variant'] 25824 13315 FFEMSKETIIK True NCI_RA007_Epitope_Rep2 1371.71082445355 1371.7097299358602 56.429 2 -0.7518099179153258 0.23194680458071665 1.0 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 122684 11290 VGGGESFL True PC9_epitope_Rep2 764.37046914076 764.36936993586 48.751 2 -0.7518305302586378 0.23194680458071665 1.0 ['ENST00000547095.5_1_12:62864501-62986526:+|nuORF'] 82527 25425 PPRRGGVLLG True PC9_epitope_Rep5 1020.6192474575597 1020.61867496793 103.03 1 -0.7518347115703394 0.23194680458071665 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 91577 23035 RIKEIQYEIFR True NCI_RA007_Epitope_Rep1 1493.8354478030499 1493.83381490379 94.661 3 -0.7518355372535093 0.23194680458071665 1.0 ['ENSG00000218336|ENST00000511685|TENM3'] 141007 17615 YSIYQGDYI True H1975_Epitope_Rep2 1120.5076908895599 1120.5065899358601 73.073 2 -0.7518838453245225 0.23194680458071665 1.0 ['RNF8|p.H101Y|1|0.04|ENSG00000112130|chr6:37368544-37368544|C/T|missense_variant'] 42286 20779 IDVLANALP True PC9_epitope_Rep1 924.5280324113199 924.52692993586 84.756 2 -0.7518914538497612 0.23195815355517466 1.0 ['ENST00000381055.7_1_5:64447501-64447618:-|nuORF'] 37478 19248 GVVARLLAL True PC9_epitope_Rep4 910.5963867546599 910.59528993586 82.14 2 -0.7519134347361744 0.23198085049794614 1.0 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 65556 27271 LRRRRFKMRRM True PC9_epitope_Rep3 1604.9456415553998 1604.9440049037898 112.28 3 -0.751923336752203 0.23198085049794614 1.0 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 82529 25591 PPRRGGVLLG True PC9_epitope_Rep5 1020.6192474575597 1020.61867496793 103.75 1 -0.7519570463433739 0.23200011820156322 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 19746 8632 ELRVFVGEEDP True NCI_RA007_Epitope_Rep2 1288.6299312805597 1288.62882993586 38.221 2 -0.7519781988084598 0.23200011820156322 1.0 ['ENSG00000149781|ENST00000345728|FERMT3', 'nc|ENSG00000149781|Q86UX7|FERMT3'] 130252 11221 VSGALRWSRR True PC9_epitope_Rep5 1186.6683229082998 1186.66666490379 48.151 3 -0.7519884068956764 0.23200011820156322 1.0 ['ENST00000289431.9_1_20:48525041-48531957:-|nuORF'] 138776 21208 YITERNYP True PC9_epitope_Rep3 1054.5083595959 1054.5072699358602 86.866 2 -0.7520009840759958 0.23200118194577823 1.0 ['ENSG00000188501|ENST00000695545|LCTL', 'nc|ENSG00000188501|Q6UWM7-2|LCTL'] 88373 11649 QSLDRETKEP True PC9_epitope_Rep3 1201.59388012501 1201.59278993586 49.827 2 -0.7520400456365288 0.23200118194577823 1.0 ['FAT4|p.R2329P|1|0.28|ENSG00000196159|chr4:125416590-125416590|G/C|missense_variant'] 61833 4757 LLAVSHVG True NCI_RA007_Epitope_Rep5 794.46503823194 794.46394993586 24.981 2 -0.7520567312673013 0.23200118194577823 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 73920 11749 NCAYSKGRRRK True NCI_RA007_Epitope_Rep2 1337.70987045045 1337.7087699358601 50.297 2 -0.7520599941652241 0.23200118194577823 1.0 ['ENSG00000125848|ENST00000341420|FLRT3'] 121021 11707 VEQFHKYLP True PC9_epitope_Rep1 1159.6025943339098 1159.60093490379 49.906 3 -0.7521219702708131 0.2320091007135787 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 56775 9096 LDLVHTQLAP True PC9_epitope_Rep5 1105.61315901761 1105.61206993586 39.934 2 -0.7521742804846228 0.2320091007135787 1.0 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3'] 82521 25032 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 103.79 1 -0.7522571724572003 0.23202044675570263 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 24259 14942 EYSYRQRERER True H1975_Epitope_Rep1 1570.76005101666 1570.75894993586 62.713 2 -0.7522676825647653 0.23202836460333875 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 91081 9211 RFLYQSSSAS True NCI_RA007_Epitope_Rep2 1144.55128703704 1144.55077496793 40.439 1 -0.7522859152714518 0.23202836460333875 1.0 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2'] 126374 10003 VLKEKVSL True PC9_epitope_Rep3 914.5800679841799 914.57896993586 43.431 2 -0.7523501111706885 0.23203970985803135 1.0 ['ENST00000443016.1_1_10:11607160-11607337:-|nuORF'] 41049 9041 HTLFGDELC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1218.5703085088896 1218.56920993586 39.769 2 -0.7524139589921498 0.23204762678563515 1.0 ['CON__P02769'] 66002 5220 LSEAMCFLAPD True H1975_Epitope_Rep2 1195.5253321829898 1195.5242299358601 25.146 2 -0.7524230079682063 0.23204762678563515 1.0 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'ENST00000520482.1_1_8:142168222-142185717:+|nuORF'] 131662 14683 VTLTYFGAHF True PC9_epitope_Rep2 1154.5760452328998 1154.5744049037899 61.742 3 -0.7524590390605496 0.23207374361095517 1.0 ['nc|ENSG00000064201|Q96QS1-4|TSPAN32', 'ENST00000483227.5_1_11:2323379-2336538:+|nuORF', 'ENST00000461200.5_1_11:2323274-2335767:+|nuORF', 'ENST00000498313.5_1_11:2323379-2337620:+|nuORF', 'nc|ENSG00000064201|Q96QS1-3|TSPAN32', 'nc|ENSG00000064201|Q96QS1-5|TSPAN32', 'nc|ENSG00000064201|Q96QS1-2|TSPAN32', 'ENSG00000064201|ENST00000182290|TSPAN32'] 11616 24271 DGGWCWGC True PC9_epitope_Rep2 882.2788943383799 882.27778993586 98.899 2 -0.7524762359828686 0.23208508752492799 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 77714 10857 NTLERREKHEK True H1975_Epitope_Rep3 1438.7640737679396 1438.7629699358602 46.843 2 -0.7526994402503491 0.2322146064760104 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 58446 14804 LEPLHILSKL True PC9_epitope_Rep3 1161.7121447828902 1161.71050490379 62.078 3 -0.7527320207104189 0.23221565731166913 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 34159 11287 GNFAGAKL True PC9_epitope_Rep2 776.41808803952 776.41698993586 48.739 2 -0.7527465906657548 0.23221565731166913 1.0 ['ENSG00000143126|ENST00000271332|CELSR2'] 139301 14731 YLKISQILT True PC9_epitope_Rep1 1077.6433965167298 1077.6422899358602 61.485 2 -0.752775118810325 0.23221565731166913 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 10556 12715 CLYYFKKLCI True PC9_epitope_Rep4 1292.6661231905998 1292.66446490379 56.762 3 -0.7527834997305622 0.23221565731166913 1.0 ['ENST00000379066.5_1_2:37544226-37544932:-|nuORF'] 67829 12216 LTAGSKYNI True PC9_epitope_Rep1 965.5181960036101 965.51708993586 51.848 2 -0.7528745197340547 0.23224176895466833 1.0 ['nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.F1269Kfs*86|1|0.06|ENSG00000127329|chr12:70559598-70559599|-/CCAATTTT|frameshift_variant', 'ENST00000552253.1_1_12:70986014-71031175:-|nuORF', 'ENST00000538174.6_1_12:70979073-71031175:-|nuORF'] 16393 12575 EEIVPMGISP True PC9_epitope_Rep1 1070.53179746242 1070.5307099358602 53.238 2 -0.7528924546936014 0.23229398992659114 1.0 ['ENST00000375163.5_1_9:100372568-100388015:-|nuORF', 'ENSG00000136925|ENST00000341170|TSTD2'] 74688 17830 NGRRRPRA True NCI_RA007_Epitope_Rep2 981.5692775733698 981.56818993586 74.094 2 -0.7529345074397653 0.23229398992659114 1.0 ['RNASEH1|p.G161S|1|0.05|ENSG00000171865|chr2:3550401-3550401|C/T|missense_variant', 'ENST00000464986.5_1_2:3597961-3599836:-|nuORF', 'ENSG00000171865|ENST00000315212|RNASEH1'] 118852 6705 VAASKVKY True NCI_RA007_Epitope_Rep2 864.5069030439199 864.50580993586 30.693 2 -0.7529770916712497 0.2323688835718611 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant', 'NEB|p.D1129Rfs*3|1|0.2|ENSG00000183091|chr2:151678058-151678059|-/T|frameshift_variant', 'NEB|p.D542Ifs*15|1|0.43|ENSG00000183091|chr2:151695629-151695629|A/-|frameshift_variant'] 105957 14230 SSSPQGPLTV True PC9_epitope_Rep4 971.4923751785899 971.49126993586 62.644 2 -0.7529910095893291 0.2323688835718611 1.0 ['nc|ENSG00000120500|P36575-2|ARR3', 'ENSG00000120500|ENST00000307959|ARR3'] 94229 7322 RRPYSPYWWSV True NCI_RA007_Epitope_Rep4 1495.73606811495 1495.7349699358601 34.802 2 -0.7529921668446157 0.2323688835718611 1.0 ['ENST00000394857.7_2_7:76054330-76054432:+|nuORF'] 46576 7129 ITALEEEK True NCI_RA007_Epitope_Rep1 931.48622716899 931.48512993586 31.72 2 -0.7529977517416264 0.2323688835718611 1.0 ['ENSG00000145309|ENST00000273936|CABS1'] 5656 8399 APADEYFTFQK True H1975_Epitope_Rep1 1315.6084675599898 1315.60736993586 37.234 2 -0.7530521569096036 0.23240632707616418 1.0 ['ENSG00000095464|ENST00000371447|PDE6C'] 74460 8209 NEVPSFYVP True H1975_Epitope_Rep3 1050.5022115863 1050.50110993586 36.558 2 -0.7530579777807861 0.23240632707616418 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 102361 15304 SLSWTQEAY True PC9_epitope_Rep5 1083.48728979815 1083.48618993586 63.876 2 -0.7530612973932019 0.23241766356520455 1.0 ['nc|ENSG00000075399|Q9Y2B5-2|VPS9D1'] 29117 13452 FTLHLRSRL True H1975_Epitope_Rep3 1141.67201130641 1141.6709099358602 57.016 2 -0.753078496209246 0.23244376836850733 1.0 ['nc|ENSG00000133943|Q7Z3D6-5|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6-4|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6-3|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6|DGLUCY', 'ENSG00000133943|ENST00000256324|DGLUCY', 'ENST00000518649.5_1_14:91626614-91647575:+|nuORF', 'nc|ENSG00000133943|Q7Z3D6-6|DGLUCY'] 123873 19849 VGRRAAKA True PC9_epitope_Rep6 827.5089687325898 827.5084249679301 89.009 1 -0.7531288932999144 0.23244480543454182 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 33857 4346 GLPHRVRGP True NCI_RA007_Epitope_Rep4 987.5726316183099 987.57152993586 23.064 2 -0.7531677563102563 0.23244480543454182 1.0 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-2|GCFC2', 'nc|ENSG00000005436|P16383-3|GCFC2', 'nc|ENSG00000005436|P16383-4|GCFC2'] 23397 13344 EVSFRYPNP True PC9_epitope_Rep3 1107.53490869691 1107.53380993586 56.361 2 -0.7531752411070917 0.23244480543454182 1.0 ['ENST00000511160.5_2_4:20702342-20703457:+|nuORF'] 117366 10858 TVPIQNQKYVP True NCI_RA007_Epitope_Rep1 1285.70303665117 1285.70192993586 46.226 2 -0.7532002624547764 0.23244480543454182 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 131533 22641 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 94.626 2 -0.7532911923159122 0.23250044302675882 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 61000 12131 LIEKVSLIIF True NCI_RA007_Epitope_Rep5 1173.7372969015698 1173.73564490379 53.317 3 -0.7533702711905121 0.23252654429463798 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 123867 15927 VGRRAAKA True NCI_RA007_Epitope_Rep4 827.5089687325898 827.5084249679301 69.131 1 -0.7534369327261958 0.2325526447916359 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 68988 21190 LTPPFQIF True PC9_epitope_Rep4 961.5273041353299 961.52620993586 89.671 2 -0.7535199672263846 0.23257633925934676 1.0 ['ENST00000565736.1_1_16:29815990-29816668:+|nuORF'] 111883 6823 TINVVRDRPDI True H1975_Epitope_Rep3 1296.7149983171998 1296.71390993586 31.199 2 -0.7535239558713914 0.23257633925934676 1.0 ['ENST00000464511.1_1_1:29527026-29529677:-|nuORF', 'ENST00000475773.5_1_1:29520676-29529710:-|nuORF', 'ENST00000453185.5_1_1:29522511-29533334:-|nuORF', 'nc|ENSG00000116353|Q9BV79-2|MECR', 'ENSG00000116353|ENST00000263702|MECR'] 65354 22923 LRDLLREQHC True NCI_RA007_Epitope_Rep3 1281.66118892253 1281.65953490379 99.637 3 -0.7535242497873141 0.23257633925934676 1.0 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 22735 9265 ETTEAVAPDI True H1975_Epitope_Rep2 1044.4975201286798 1044.49642993586 40.593 2 -0.7535590247910543 0.23257633925934676 1.0 ['ENST00000393023.2_1_13:64385317-64385740:-|nuORF'] 96633 9686 SAIERNARII True PC9_epitope_Rep5 1141.6567551650899 1141.65511490379 42.225 3 -0.7535914994654302 0.23257633925934676 1.0 ['ENSG00000169122|ENST00000519262|FAM110B'] 4883 6857 ALESYIHHS True PC9_epitope_Rep1 1055.5036085686302 1055.5025099358602 31.18 2 -0.7536009083398041 0.23257633925934676 1.0 ['TAS2R20|p.F267Lfs*13|1|0.18|ENSG00000255837|chr12:10997075-10997075|A/-|frameshift_variant'] 64179 7579 LPGAWHFPGLP True NCI_RA007_Epitope_Rep1 1190.62366413166 1190.62201490379 33.474 3 -0.7536510737914868 0.2325876707272056 1.0 ['ENSG00000253831|ENST00000454449|ETV3L'] 59793 12008 LGELVRDTL True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 51.215 2 -0.7537197701119832 0.23260689818095914 1.0 ['nc|ENSG00000187905|Q6ZQY2-2|LRRC74B', 'ENSG00000187905|ENST00000442047|LRRC74B'] 106105 10032 STDGQVMWWN True H1975_Epitope_Rep2 1222.5077079728999 1222.50660993586 43.579 2 -0.7537324649777286 0.23260689818095914 1.0 ['DNAI2|p.D293N|1|0.08|ENSG00000171595|chr17:74301058-74301058|G/A|missense_variant'] 32328 20480 GFGEEMVKEI True PC9_epitope_Rep2 1137.53761111885 1137.53650993586 84.208 2 -0.7537512300184929 0.23260689818095914 1.0 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant'] 66755 26724 LSLLRPQKKLK True H1975_Epitope_Rep1 1322.87619041622 1322.8750899358602 111.28 2 -0.7537707082722117 0.23262268942302014 1.0 ['ENST00000361203.7_2_6:56472809-56472863:-|nuORF'] 32400 19725 GFQLRRRV True NCI_RA007_Epitope_Rep4 1030.6148307834599 1030.6137299358602 85.244 2 -0.7537707565653373 0.23262268942302014 1.0 ['ENST00000475028.2_1_6:679447-689206:-|nuORF'] 71951 19513 MESLDGLHLP True H1975_Epitope_Rep3 1110.5379454720198 1110.5368499358601 81.772 2 -0.7537788646848338 0.23262268942302014 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 12327 8457 DIQLTCYLSP True H1975_Epitope_Rep2 1151.55326118299 1151.55216993586 37.482 2 -0.7538128962140828 0.23262268942302014 1.0 ['ENSG00000204290|ENST00000454136|BTNL2', 'nc|ENSG00000204290|Q9UIR0-2|BTNL2', 'nc|ENSG00000204290|Q9UIR0-1|BTNL2', 'nc|ENSG00000204290|Q9UIR0-4|BTNL2', 'nc|ENSG00000204290|Q9UIR0-3|BTNL2'] 54657 12852 KYLQPKVNP True PC9_epitope_Rep3 1085.62332977849 1085.62222993586 54.454 2 -0.7538633530061226 0.23264534797885847 1.0 ['ENST00000456324.5_1_19:36727248-36727317:+|nuORF'] 81809 12824 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 54.201 2 -0.7538650038479837 0.23264534797885847 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 138811 13168 YIWVKGRWKWK True NCI_RA007_Epitope_Rep2 1548.87177374212 1548.8701349037901 55.852 3 -0.7538936804086415 0.2326566767550011 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 27539 9961 FNDGNAAVV True PC9_epitope_Rep4 905.4242956187699 905.42374496793 45.973 1 -0.7539153578346157 0.2326645703234569 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 45214 17488 IPSELEEPI True PC9_epitope_Rep5 1025.5280919809697 1025.52698993586 72.269 2 -0.7539188035645111 0.2326645703234569 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66'] 80611 11792 PGQWIIC[Carbamidomethyl]VEGD True NCI_RA007_Epitope_Rep1 1272.5808731925897 1272.5797699358602 49.846 2 -0.7539248269491139 0.23267589831409252 1.0 ['nc|ENSG00000131373|Q9UJ83-3|HACL1', 'nc|ENSG00000131373|Q9UJ83-4|HACL1', 'nc|ENSG00000131373|Q9UJ83-2|HACL1', 'ENSG00000131373|ENST00000321169|HACL1'] 79678 16785 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.4554749679301 69.388 1 -0.7539708094185643 0.23268035606205992 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 35569 14019 GSYRHHLMVNP True PC9_epitope_Rep1 1309.63497417469 1309.63386993586 58.762 2 -0.7540103421958751 0.23268035606205992 1.0 ['ENST00000437621.6_1_7:1624674-1624941:+|nuORF'] 127227 13044 VLWGPSIL True PC9_epitope_Rep1 883.51673945163 883.51564993586 55.043 2 -0.7540239879465087 0.23268035606205992 1.0 ['ENST00000529749.5_2_11:31484759-31531097:-|nuORF'] 36602 8535 GVHSNHAPA True NCI_RA007_Epitope_Rep5 888.42021329784 888.41910993586 39.513 2 -0.7540702743053844 0.2327064450414809 1.0 ['ENST00000301459.4_1_11:63684068-63684296:-|nuORF'] 69358 21271 LTVRGRSWCWR True PC9_epitope_Rep5 1418.7353569222998 1418.7342499358601 86.871 2 -0.7541031303599848 0.2327177715778752 1.0 ['ENST00000422053.3_1_20:368928-376885:+|nuORF'] 46540 7881 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 37.009 2 -0.7541688101071795 0.23272566241051 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 116920 12799 TVFSYFIKYW True H1975_Epitope_Rep1 1352.6805103014399 1352.6794099358601 54.295 2 -0.7542103129130729 0.23272566241051 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 20231 11404 ENLLKSLQAPE True H1975_Epitope_Rep3 1240.66631678928 1240.66520993586 48.981 2 -0.7542452867964238 0.23273011749424338 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 83625 16190 PVDNLVIK True PC9_epitope_Rep1 896.53311779176 896.53202993586 67.091 2 -0.754288647578488 0.23273011749424338 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 102056 10517 SLQWRHRWDTP True PC9_epitope_Rep5 1480.7323797168397 1480.73074490379 45.441 3 -0.7543054311086498 0.23273011749424338 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 25006 1344 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 7.1176 2 -0.7543151972498555 0.2327345721834364 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 102047 10508 SLQWDRITRLE True PC9_epitope_Rep3 1415.7521121019097 1415.75047490379 45.357 3 -0.7543219713693954 0.2327345721834364 1.0 ['nc|ENSG00000168268|Q9H857-4|NT5DC2', 'nc|ENSG00000168268|Q9H857|NT5DC2', 'nc|ENSG00000168268|Q9H857-3|NT5DC2', 'ENSG00000168268|ENST00000422318|NT5DC2'] 18495 11571 EKEVLESPKP True NCI_RA007_Epitope_Rep1 1154.6183039676998 1154.61720993586 48.977 2 -0.7543264803035267 0.2327345721834364 1.0 ['ENSG00000185482|ENST00000332782|STAC3'] 63169 10353 LLRRCLADR True NCI_RA007_Epitope_Rep2 1114.63933127914 1114.6382299358602 44.862 2 -0.7543441609385021 0.23276065651198488 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 60955 23527 LIDLLVLFT True H1975_Epitope_Rep1 1045.64233388757 1045.64122993586 97.742 2 -0.7543770806395865 0.23277198057650583 1.0 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'TBC1D32|p.E577Kfs*8|1|0.07|ENSG00000146350|chr6:121279125-121279125|C/-|frameshift_variant'] 81509 18921 PLGTQLSV True PC9_epitope_Rep2 813.45961849833 813.45852993586 78.144 2 -0.7544076351861809 0.23278330430675678 1.0 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 71599 4825 MDHVNEVYVKE True PC9_epitope_Rep5 1361.6285513815703 1361.62690490379 23.602 3 -0.7545428336112049 0.2328979411113571 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 129471 12985 VRIVPSPDW True NCI_RA007_Epitope_Rep2 1067.57637958607 1067.5758749679298 55.132 1 -0.7546710650200273 0.23293291225170448 1.0 ['ENSG00000159674|ENST00000290902|SPON2'] 112923 15457 TLLGLLHG True PC9_epitope_Rep3 822.4963383602201 822.49524993586 64.608 2 -0.7547039765594973 0.23293291225170448 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2', 'nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 65969 17915 LSDVQKLNL True PC9_epitope_Rep1 1028.5866099165999 1028.58550993586 73.703 2 -0.7547043128973583 0.23293291225170448 1.0 ['LRRC30|p.E72D|1|0.14|ENSG00000206422|chr18:7231354-7231354|G/C|missense_variant'] 126377 6835 VLKERLDPET True H1975_Epitope_Rep3 1198.6557521055797 1198.65464993586 31.246 2 -0.7547417598791327 0.23293291225170448 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 89374 21771 QWTSRKRK True PC9_epitope_Rep2 1088.6203100867199 1088.61920993586 89.212 2 -0.7547701615290884 0.23293291225170448 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 4978 13242 ALGTALKVVG True PC9_epitope_Rep1 927.5753169569099 927.57420993586 55.801 2 -0.7547757294571166 0.23293291225170448 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 116691 6056 TVCWITCR True H1975_Epitope_Rep1 980.45719305352 980.45608993586 28.367 2 -0.7548019090982825 0.23293291225170448 1.0 ['ENST00000438773.2_1_8:141294057-141294090:-|nuORF'] 85234 6706 QEQEVERHRR True H1975_Epitope_Rep1 1365.6861578004098 1365.6850699358602 30.84 2 -0.7548368188839173 0.23295211392311665 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000461159.6_1_7:18330122-18868840:+|nuORF', 'HDAC9|p.G781Wfs*5|1|0.15|ENSG00000048052|chr7:18829186-18829187|-/T|frameshift_variant', 'HDAC9|p.L418Yfs*29|1|0.16|ENSG00000048052|chr7:18648474-18648474|C/-|frameshift_variant', 'nc|ENSG00000048052|Q9UKV0-11|HDAC9', 'nc|ENSG00000048052|Q9UKV0-9|HDAC9', 'nc|ENSG00000048052|Q9UKV0-10|HDAC9', 'nc|ENSG00000048052|Q9UKV0-8|HDAC9', 'nc|ENSG00000048052|Q9UKV0-3|HDAC9'] 37942 13799 HAAAVLLL True PC9_epitope_Rep2 806.50142374066 806.50032993586 58.361 2 -0.7548423344421467 0.23295211392311665 1.0 ['nc|ENSG00000074410|O43570-2|CA12', 'ENSG00000074410|ENST00000178638|CA12'] 101705 12166 SLMPRAMAI True PC9_epitope_Rep1 988.5197933100799 988.51868993586 51.661 2 -0.7548450740786907 0.23295211392311665 1.0 ['nc|ENSG00000158793|Q86X76-4|NIT1'] 36951 12120 GVLYKEDNYV True PC9_epitope_Rep4 1198.58700383942 1198.5859099358602 54.427 2 -0.7548929836064187 0.23300426461256954 1.0 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 119067 8459 VAGILNAALPP True H1975_Epitope_Rep1 1034.6124307416198 1034.61132993586 37.467 2 -0.7549083177489204 0.23300426461256954 1.0 ['TMPPE|p.Q186L|1|0.56|ENSG00000188167|chr3:33093639-33093639|T/A|missense_variant'] 120487 11831 VEEWPLEAL True NCI_RA007_Epitope_Rep4 1084.54407639828 1084.5429699358601 52.489 2 -0.7549914321686068 0.23303033880297486 1.0 ['ENST00000314289.12_2_4:2515676-2516066:+|nuORF'] 88773 11546 QTQIEEERKK True NCI_RA007_Epitope_Rep2 1287.6782784553095 1287.67718993586 49.503 2 -0.7550067993653534 0.23304165621449335 1.0 ['nc|ENSG00000077935|Q8NDV3-2|SMC1B', 'ENSG00000077935|ENST00000357450|SMC1B'] 24978 119 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 0.68029 2 -0.7550231586415939 0.23306772908366533 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 129956 23590 VRVGALLL True PC9_epitope_Rep6 839.5592729699499 839.5587249679301 103.89 1 -0.7550700726717674 0.23309380118339704 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 19548 18633 ELPWPELI True NCI_RA007_Epitope_Rep3 995.53278343859 995.53168993586 81.526 2 -0.755077207741427 0.23310511715752819 1.0 ['ENST00000520884.5_1_9:26910398-26913942:-|nuORF'] 107490 13191 SVNENGLVTV True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 55.744 2 -0.7551307670381856 0.23312774810399267 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1'] 56659 21045 LDIWYSLF True NCI_RA007_Epitope_Rep5 1055.53278343859 1055.5316899358602 87.958 2 -0.7551378701637975 0.23312774810399267 1.0 ['ENST00000436950.5_1_2:64455600-64456705:+|nuORF'] 75842 20324 NLPKKHPLF True PC9_epitope_Rep2 1092.64439957624 1092.64330993586 83.599 2 -0.7552355155635639 0.23313562322946177 1.0 ['ENST00000569782.2_1_16:31520289-31520549:+|nuORF'] 98506 8230 SFLLDLLNAT True H1975_Epitope_Rep1 1105.60192562757 1105.60082993586 36.601 2 -0.7552492417995457 0.23313562322946177 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X'] 119464 25690 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 104.52 1 -0.7553177135443375 0.2331469377517447 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 79688 15640 PDSFNIPGSS True PC9_epitope_Rep4 1019.45598966987 1019.4554749679301 68.085 1 -0.7553804814688333 0.23319516764267698 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 102833 19632 SNRLRLALVR True NCI_RA007_Epitope_Rep2 1196.7465732289998 1196.74546993586 81.314 2 -0.7553833481820058 0.23319516764267698 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 86474 4518 QKRYDSLQK True H1975_Epitope_Rep3 1164.6251206836398 1164.62402993586 22.499 2 -0.7554205799381718 0.23319516764267698 1.0 ['ENST00000468163.1_1_1:26597553-26598598:+|nuORF', 'nc|ENSG00000130695|Q6P2H3-3|CEP85', 'nc|ENSG00000130695|Q6P2H3-4|CEP85', 'ENSG00000130695|ENST00000451429|CEP85', 'nc|ENSG00000130695|Q6P2H3|CEP85'] 37395 6254 GVSSRQDGGR True PC9_epitope_Rep2 1017.4951691432498 1017.49406993586 29.453 2 -0.7554250073690235 0.23319516764267698 1.0 ['ENST00000480503.5_1_7:45018537-45018588:-|nuORF'] 100110 20190 SISLSVSFPDV True PC9_epitope_Rep3 1149.59175486669 1149.59064993586 82.919 2 -0.7554598983445857 0.23319516764267698 1.0 ['nc|ENSG00000114013|P42081-5|CD86', 'nc|ENSG00000114013|P42081-6|CD86', 'nc|ENSG00000114013|P42081-4|CD86', 'nc|ENSG00000114013|P42081-3|CD86', 'ENSG00000114013|ENST00000330540|CD86'] 119457 25461 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 105.47 1 -0.7554795713803569 0.23319516764267698 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 127539 11988 VNQLPADFRIL True NCI_RA007_Epitope_Rep2 1284.7190210684798 1284.7179299358602 51.222 2 -0.755489648717912 0.23319516764267698 1.0 ['ENST00000342745.4_1_14:70078473-70125325:+|nuORF'] 119467 25931 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 105.54 1 -0.7554910211394698 0.23319516764267698 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 100835 11994 SLELGHSAA True H1975_Epitope_Rep2 883.4399456829101 883.43884993586 51.216 2 -0.7555081445699942 0.23319516764267698 1.0 ['ENSG00000141506|ENST00000447110|PIK3R5', 'ENST00000578515.5_1_17:8785060-8814811:-|nuORF', 'nc|ENSG00000141506|Q8WYR1-2|PIK3R5'] 65569 12372 LRRYQQQVRRR True NCI_RA007_Epitope_Rep2 1557.90765874021 1557.90601490379 52.729 3 -0.7555295268482999 0.23319516764267698 1.0 ['ENSG00000173237|ENST00000683896|C11orf86'] 119458 25552 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 105.83 1 -0.7555407387668741 0.23319516764267698 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 100048 11651 SIRKAFVL True PC9_epitope_Rep2 932.5807366905199 932.57962993586 50.145 2 -0.7555539512734076 0.23319516764267698 1.0 ['ENST00000552699.5_1_12:50156680-50156842:+|nuORF'] 61294 15839 LIQDRITL True PC9_epitope_Rep5 970.58113061334 970.58002993586 65.915 2 -0.7555591278787254 0.23319516764267698 1.0 ['ENST00000477564.5_1_22:42968458-42968503:+|nuORF'] 111455 17622 THTTLAAYVM True PC9_epitope_Rep1 1106.5430308524599 1106.54192993586 72.575 2 -0.7555915846247223 0.23319516764267698 1.0 ['CLCN3|p.D656Y|1|0.3|ENSG00000109572|chr4:169707083-169707083|G/T|missense_variant'] 31163 14747 GAWMRDCDI True PC9_epitope_Rep5 1065.43718588493 1065.43608993586 61.723 2 -0.7555941563744433 0.23319516764267698 1.0 ['ENSG00000142444|ENST00000270502|TIMM29'] 25005 1217 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 6.4396 2 -0.7556103029210586 0.23319516764267698 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 119470 26207 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 106.86 1 -0.7557153015566996 0.23320746924688043 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 119461 25823 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 106.88 1 -0.7557191436442162 0.23320746924688043 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 97615 4687 SEEYPNKPP True H1975_Epitope_Rep2 1059.48728979815 1059.48618993586 23.123 2 -0.7557303349917255 0.23320746924688043 1.0 ['ENSG00000119048|ENST00000265339|UBE2B'] 112493 12872 TLDPHLLL True PC9_epitope_Rep3 920.53311779176 920.53202993586 54.53 2 -0.755775453576263 0.23320746924688043 1.0 ['ENST00000395496.5_1_6:32136507-32136903:-|nuORF'] 106527 11038 STLPKSLSL True PC9_epitope_Rep5 944.55424715916 944.55314993586 47.445 2 -0.755814701224064 0.23320746924688043 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 23069 8711 EVIFFVFIFYY True H1975_Epitope_Rep3 1485.75842626897 1485.75732993586 38.507 2 -0.755862177736606 0.2332114312678798 1.0 ['PKD2L1|p.C360F|1|0.3|ENSG00000107593|chr10:100297086-100297086|C/A|missense_variant'] 111728 11877 TIGSPPLKELK True H1975_Epitope_Rep1 1181.70197402201 1181.70086993586 50.683 2 -0.7558675134911051 0.2332114312678798 1.0 ['ENST00000254323.6_1_19:13942265-13942868:+|nuORF'] 46471 5474 ISVEDLWKAWK True NCI_RA007_Epitope_Rep4 1373.73433677945 1373.73268490379 27.64 3 -0.7558945284174494 0.2332114312678798 1.0 ['ENSG00000167323|ENST00000526596|STIM1', 'nc|ENSG00000167323|Q13586-2|STIM1', 'nc|ENSG00000167323|Q13586|STIM1'] 125015 9105 VIAPAAIARAP True H1975_Epitope_Rep3 1048.6393141958 1048.63820993586 40.01 2 -0.7559075270208337 0.2332114312678798 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-2|MLXIP', 'ENST00000541750.1_12:122618368-122620257:+|nuORF', 'nc|ENSG00000175727|Q9HAP2-4|MLXIP'] 134119 5692 VYLAEKGEND True NCI_RA007_Epitope_Rep3 1136.5349682665599 1136.53333490379 29.369 3 -0.7559254010709794 0.2332114312678798 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 78924 7192 PAGREMAV True PC9_epitope_Rep1 829.4116227600898 829.41052993586 32.477 2 -0.755936673291077 0.2332114312678798 1.0 ['ENST00000583444.1_1_17:80187666-80187933:+|nuORF'] 117833 14125 TVYDRTTVL True PC9_epitope_Rep4 1066.5658744720201 1066.56476993586 62.236 2 -0.7559525592640459 0.2332114312678798 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 122877 4604 VGHLRVRRFWS True H1975_Epitope_Rep1 1411.79492040375 1411.79326490379 22.735 3 -0.7560057213473428 0.2332114312678798 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 129630 15268 VRPGHGKG True NCI_RA007_Epitope_Rep4 806.4511195033 806.45002993586 66.373 2 -0.7560081518601319 0.2332114312678798 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 56891 13458 LDPVMDLLAL True PC9_epitope_Rep2 1098.59948309942 1098.59838993586 57.044 2 -0.7560316583179255 0.2332114312678798 1.0 ['nc|ENSG00000178996|Q96RF0-3|SNX18', 'ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 1683 4192 AEGEGWRRPQ True NCI_RA007_Epitope_Rep2 1184.56866843668 1184.56756993586 20.946 2 -0.7560705900756242 0.2332114312678798 1.0 ['ENST00000308020.5_1_11:490638-491184:+|nuORF'] 86636 7378 QLFLDWYVFWK True NCI_RA007_Epitope_Rep2 1543.7863723523099 1543.78526993586 33.323 2 -0.756101873987734 0.2332114312678798 1.0 ['ENST00000496121.5_1_21:30434776-30434839:-|nuORF'] 101674 22977 SLLWIWMAEL True PC9_epitope_Rep1 1260.6576666818798 1260.65656993586 93.18 2 -0.756121544541096 0.2332114312678798 1.0 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'ENST00000431180.5_1_3:47122459-47155398:-|nuORF'] 136400 22790 WTRRRRRQPRR True PC9_epitope_Rep1 1622.9566746212997 1622.95556993586 92.473 2 -0.7561507720782543 0.2332114312678798 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 109414 8340 TDEPCIKCPE True NCI_RA007_Epitope_Rep5 1133.4732966101299 1133.4721899358601 38.754 2 -0.7561732390259216 0.2332114312678798 1.0 ['AFAP1L2|p.P582T|1|0.37|ENSG00000169129|chr10:114300489-114300489|G/T|missense_variant'] 18014 10376 EIEDIFHK True NCI_RA007_Epitope_Rep2 1029.51311062317 1029.51200993586 44.951 2 -0.7561777490561685 0.2332114312678798 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'nc|ENSG00000183914|Q9P225-3|DNAH2'] 136474 13951 WVLSEAEDLEK True H1975_Epitope_Rep1 1317.6452469915296 1317.64414993586 58.818 2 -0.7561894128697907 0.23322273833222737 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A', 'nc|ENSG00000168026|Q8NDW8-3|TTC21A'] 113753 8562 TMETEAGFPRP True NCI_RA007_Epitope_Rep1 1234.5652228490198 1234.5635849037901 37.306 3 -0.7562601962682739 0.23323404506311196 1.0 ['ENST00000518450.5_3_19:48707158-48707464:-|nuORF'] 42654 12717 IEHIQINKAP True PC9_epitope_Rep3 1161.65060715549 1161.6495099358601 53.938 2 -0.7563005655782826 0.23324535146054823 1.0 ['ENST00000407033.2_1_6:56736261-56736483:+|nuORF'] 107241 19447 SVKIHTLKI True PC9_epitope_Rep1 1037.65971528721 1037.65860993586 79.617 2 -0.756372438351768 0.23328614822023652 1.0 ['ENST00000598377.2_2_19:53715316-53715451:+|nuORF'] 87050 10167 QNFQCWVLP True H1975_Epitope_Rep2 1133.5328005219299 1133.53114490379 44.109 3 -0.7564151511120166 0.23329401356531995 1.0 ['nc|ENSG00000134884|Q9NWB6-3|ARGLU1', 'nc|ENSG00000134884|Q9NWB6-2|ARGLU1'] 113247 10130 TLRAESINERT True NCI_RA007_Epitope_Rep2 1288.67352742804 1288.67242993586 43.992 2 -0.7564581435512715 0.23329401356531995 1.0 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant'] 79501 6823 PCCGCCCG True PC9_epitope_Rep6 744.15217989724 744.15162496793 35.106 1 -0.7565271989739051 0.23330531841170138 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 137489 7258 YEEFWIKYAKY True H1975_Epitope_Rep1 1538.74456710998 1538.7429149037903 32.927 3 -0.7566780297404849 0.23337658125202726 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 68648 12887 LTIIGHGL True PC9_epitope_Rep6 822.4963383602201 822.49524993586 61.096 2 -0.7566796121046058 0.23337658125202726 1.0 ['ENSG00000064989|ENST00000392370|CALCRL', 'CALCRL|p.I284Hfs*23|1|0.04|ENSG00000064989|chr2:187359122-187359123|-/GTATG|frameshift_variant'] 114836 10301 TQMKCFLFG True PC9_epitope_Rep1 1073.50380889277 1073.5027099358601 44.507 2 -0.7566893007842589 0.23337658125202726 1.0 ['ENSG00000158077|ENST00000299481|NLRP14', 'NLRP14|p.L805Ffs*6|1|0.12|ENSG00000158077|chr11:7057798-7057798|C/-|frameshift_variant'] 43454 15117 IGGSPEIKVL True PC9_epitope_Rep4 1011.5964463243099 1011.59534993586 66.076 2 -0.7566983644850355 0.23337658125202726 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 56027 7017 LASNSVDV True NCI_RA007_Epitope_Rep5 803.40249754503 803.40140993586 33.671 2 -0.7567016905668917 0.23337658125202726 1.0 ['SLC25A14|p.P255S|1|0.27|ENSG00000102078|chrX:130365584-130365584|C/T|missense_variant'] 44065 11119 IILKRKRGRPP True NCI_RA007_Epitope_Rep1 1332.8830071321597 1332.88135490379 47.251 3 -0.7567231024130093 0.23338100222618643 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 142771 7013 YYRARWELYDR True H1975_Epitope_Rep1 1589.7739101756497 1589.77280993586 32.01 2 -0.756726036768557 0.23338100222618643 1.0 ['ENSG00000181523|ENST00000326317|SGSH'] 142067 27508 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 113.49 3 -0.7567568171370783 0.23338100222618643 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 115900 8059 TSFAVLMDV True H1975_Epitope_Rep1 981.4841189940099 981.48302993586 35.943 2 -0.7568184421550278 0.2333923042901371 1.0 ['ENSG00000143126|ENST00000271332|CELSR2', 'ENST00000489018.1_1_1:109812400-109812848:+|nuORF'] 65520 16561 LRPRTLRYFRR True NCI_RA007_Epitope_Rep3 1532.9164325187596 1532.9153299358602 72.933 2 -0.7569072777610788 0.23349206115198065 1.0 ['ENST00000562302.1_1_16:30075495-30075856:+|nuORF'] 56770 6891 LDLSHNKLSDP True PC9_epitope_Rep2 1237.63026563373 1237.62916993586 31.908 2 -0.7569247567943456 0.2335033612454299 1.0 ['ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1'] 124319 5415 VGTQDRRRRWK True PC9_epitope_Rep3 1456.8123613730397 1456.81072490379 25.901 3 -0.7570009340989324 0.2335146610057052 1.0 ['nc|ENSG00000130643|Q9NYX4-3|CALY'] 94371 18311 RRRQRRRFSP True NCI_RA007_Epitope_Rep5 1413.8290144966895 1413.8279099358601 77.235 2 -0.7570337101999101 0.2335451154974424 1.0 ['ENST00000371953.7_1_10:89623465-89623600:+|nuORF'] 101216 11322 SLHGQRELRR True NCI_RA007_Epitope_Rep1 1250.6956002852999 1250.6945099358602 48.011 2 -0.7570340145984878 0.2335451154974424 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.E2290Kfs*32|1|0.41|ENSG00000167548|chr12:49040902-49040902|C/-|frameshift_variant', 'KMT2D|p.P2354Lfs*30|1|0.08|ENSG00000167548|chr12:49040709-49040709|G/-|frameshift_variant'] 113825 8003 TNEPNPVEE True NCI_RA007_Epitope_Rep5 1027.4458189089898 1027.44472993586 37.477 2 -0.757037368301149 0.2335451154974424 1.0 ['COL11A1|p.G1480Dfs*18|1|0.17|ENSG00000060718|chr1:102889480-102889480|C/-|frameshift_variant', 'nc|ENSG00000060718|P12107-3|COL11A1', 'ENSG00000060718|ENST00000370096|COL11A1', 'nc|ENSG00000060718|P12107-2|COL11A1', 'COL11A1|p.G327W|1|0.4|ENSG00000060718|chr1:103025532-103025532|C/A|missense_variant'] 62760 11821 LLLQFHRTSEK True NCI_RA007_Epitope_Rep2 1370.7670338900596 1370.7659299358602 50.581 2 -0.7570652999101256 0.2335451154974424 1.0 ['ENST00000452075.7_1_10:43015418-43015709:-|nuORF'] 132427 25028 VVARTLGG True PC9_epitope_Rep5 771.4602872046698 771.4597349679301 101.41 1 -0.7571118502825132 0.23355641380936937 1.0 ['IRS4|p.G575Dfs*36|1|0.72|ENSG00000133124|chrX:108734621-108734621|C/-|frameshift_variant'] 109222 5403 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 25.616 2 -0.7571451537493477 0.23359719335485488 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 58212 18791 LELERRFVFQK True NCI_RA007_Epitope_Rep1 1463.8248831193498 1463.82378993586 77.235 2 -0.757158235024271 0.23360160372630523 1.0 ['ENST00000550249.2_1_2:74725056-74728711:-|nuORF', 'nc|ENSG00000179528|Q6XYB7-2|LBX2', 'ENSG00000179528|ENST00000377566|LBX2'] 140486 9336 YRKMKERL True PC9_epitope_Rep6 1122.6331832695398 1122.6315449037902 46.093 3 -0.7571643932336923 0.23360160372630523 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 111509 13099 TIAAGVVTEI True PC9_epitope_Rep5 972.54916177872 972.54806993586 55.389 2 -0.7571693699094041 0.23360160372630523 1.0 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-4|HBS1L', 'ENST00000527005.5_1_6:135286419-135303731:-|nuORF'] 81753 19147 PLPHIAVL True PC9_epitope_Rep5 858.5327238689399 858.53162993586 78.683 2 -0.7572238480200771 0.23361290037291982 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 60124 17467 LGLVDSLI True PC9_epitope_Rep3 828.49566965388 828.49456993586 72.363 2 -0.7572966912089997 0.23365904702952056 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'nc|ENSG00000186191|P59827-2|BPIFB4'] 87120 14654 QNVKQALVL True PC9_epitope_Rep6 1011.6076797143498 1011.60658993586 68.287 2 -0.7572996769114996 0.23365904702952056 1.0 ['ZNF75D|p.Q196Lfs*5|1|0.13|ENSG00000186376|chrX:135292298-135292299|-/A|frameshift_variant', 'nc|ENSG00000186376|P51815-2|ZNF75D', 'ENSG00000186376|ENST00000370766|ZNF75D'] 79840 5974 PEHAPRTSPSP True H1975_Epitope_Rep3 1174.5730851107799 1174.57198993586 27.991 2 -0.7573414735771965 0.23365904702952056 1.0 ['ENST00000494191.6_1_1:17280548-17280737:+|nuORF'] 12191 15096 DIFNNQLKELR True H1975_Epitope_Rep1 1388.7412130650398 1388.7401099358601 63.321 2 -0.7573425428347896 0.23365904702952056 1.0 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'ITSN1|p.E686Hfs*57|1|0.07|ENSG00000205726|chr21:33797480-33797481|-/ACATT|frameshift_variant', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'ITSN1|p.G1004Ffs*20|1|0.1|ENSG00000205726|chr21:33819308-33819309|-/TCGTT|frameshift_variant', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1'] 94764 9290 RSKTDLDCIF True PC9_epitope_Rep6 1196.5859582935998 1196.58430490379 45.897 3 -0.7573521847276451 0.23365904702952056 1.0 ['ENSG00000254093|ENST00000314787|PINX1', 'ENST00000524061.1_1_8:10645233-10677771:-|nuORF'] 70111 10147 LVPELQAT True PC9_epitope_Rep1 869.4858332461699 869.48472993586 43.906 2 -0.7573544017543276 0.23365904702952056 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 31024 11861 GASSGPVAWGP True H1975_Epitope_Rep1 984.4664947839199 984.46594496793 50.621 1 -0.7573660237412405 0.23365904702952056 1.0 ['ENSG00000163884|ENST00000296233|KLF15'] 5499 7102 ALYHSQSP True PC9_epitope_Rep4 901.42938099921 901.42828993586 34.585 2 -0.7573726834623383 0.23365904702952056 1.0 ['nc|ENSG00000083123|P21953-2|BCKDHB', 'ENSG00000083123|ENST00000320393|BCKDHB', 'BCKDHB|p.G192V|1|0.48|ENSG00000083123|chr6:80168972-80168972|G/T|missense_variant'] 81265 9257 PKTFFKLHDV True PC9_epitope_Rep6 1230.67609362734 1230.6744449037901 45.759 3 -0.7573797788253009 0.2336850792902199 1.0 ['nc|ENSG00000070081|P80303-2|NUCB2', 'ENSG00000070081|ENST00000529010|NUCB2'] 140615 20906 YRRNFNYRRRR True H1975_Epitope_Rep3 1655.8981566856698 1655.8970499358602 87.307 2 -0.7574105701443863 0.23372240398502667 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 102956 14131 SPEPEPEP True PC9_epitope_Rep3 880.3814277472799 880.38032993586 59.439 2 -0.7574151115511776 0.23372240398502667 1.0 ['TGM1|p.A789Sfs*14|1|0.34|ENSG00000092295|chr14:24249403-24249404|-/G|frameshift_variant', 'ENSG00000092295|ENST00000206765|TGM1'] 140485 12731 YRKMKERL True PC9_epitope_Rep3 1122.6331832695398 1122.6315449037902 53.99 3 -0.7574194106087556 0.23372680784591127 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 109478 10636 TDLLLVNHK True H1975_Epitope_Rep3 1051.6025943339102 1051.6014899358602 45.985 2 -0.7574254534564062 0.23372680784591127 1.0 ['nc|ENSG00000147050|O15550|KDM6A', 'ENSG00000147050|ENST00000611820|KDM6A', 'KDM6A|p.F1372Lfs*4|1|0.2|ENSG00000147050|chrX:45110187-45110187|T/-|frameshift_variant'] 43240 23477 IFLRKLNCL True PC9_epitope_Rep1 1118.66342076866 1118.66232993586 95.089 2 -0.7574291596749176 0.23372680784591127 1.0 ['ENSG00000178177|ENST00000635767|LCORL'] 109483 8790 TDLNRDVTL True PC9_epitope_Rep4 1045.54038800017 1045.53928993586 41.325 2 -0.7575274327516092 0.23376412856069204 1.0 ['nc|ENSG00000073712|Q96AC1-2|FERMT2', 'ENSG00000073712|ENST00000341590|FERMT2', 'nc|ENSG00000073712|Q96AC1-3|FERMT2'] 6057 17226 APLLKRWEQLL True H1975_Epitope_Rep3 1365.81325580649 1365.8121499358601 71.901 2 -0.7575290497297243 0.23376412856069204 1.0 ['SPTA1|p.A2012P|1|0.17|ENSG00000163554|chr1:158623069-158623069|C/G|missense_variant'] 113713 20393 TLYRIELL True PC9_epitope_Rep5 1019.6015317047498 1019.60042993586 83.478 2 -0.7577408056577505 0.2338638373121132 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000124177|ENST00000373233|CHD6'] 64312 18271 LPLAAAPSF True H1975_Epitope_Rep1 885.49600400705 885.4954549679301 76.143 1 -0.7578357288163379 0.23387952375338913 1.0 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF'] 65466 9969 LRKKNQAL True PC9_epitope_Rep4 969.6083484206898 969.60724993586 46.005 2 -0.7578489238192883 0.23387952375338913 1.0 ['ENSG00000188549|ENST00000397536|CCDC9B', 'nc|ENSG00000188549|Q6ZUT6|CCDC9B', 'ENST00000558912.1_1_15:40631451-40632237:-|nuORF'] 41715 6036 IAKQGKAVL True NCI_RA007_Epitope_Rep4 926.5913013742198 926.59020993586 29.835 2 -0.7578608517213309 0.23387952375338913 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 130313 9669 VSIGPGLPK True PC9_epitope_Rep2 866.52255310806 866.52144993586 42.529 2 -0.7579023359018154 0.23387952375338913 1.0 ['ENSG00000157483|ENST00000288235|MYO1E'] 81815 12637 PLPPVPASP True PC9_epitope_Rep3 873.4960040070499 873.49490993586 53.631 2 -0.7579173222800913 0.23388047386102434 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 133189 25253 VVRRVFGRIRR True H1975_Epitope_Rep1 1412.8953031513597 1412.89420993586 104.6 2 -0.7579348995820068 0.23388047386102434 1.0 ['ARHGAP36|p.R177Gfs*50|1|0.57|ENSG00000147256|chrX:131083940-131083940|C/-|frameshift_variant', 'nc|ENSG00000147256|Q6ZRI8-3|ARHGAP36', 'nc|ENSG00000147256|Q6ZRI8-5|ARHGAP36', 'nc|ENSG00000147256|Q6ZRI8-2|ARHGAP36', 'nc|ENSG00000147256|Q6ZRI8-4|ARHGAP36', 'ENSG00000147256|ENST00000276211|ARHGAP36'] 56887 14298 LDPTFEPIP True H1975_Epitope_Rep3 1027.5226126777097 1027.5215099358602 60.34 2 -0.7579872200914716 0.23388047386102434 1.0 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant'] 65557 27489 LRRRRFKMRRM True PC9_epitope_Rep5 1604.9456415553998 1604.9440049037898 112.86 3 -0.758020147385228 0.23388047386102434 1.0 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 81816 11239 PLPPVPASP True PC9_epitope_Rep6 873.4960040070499 873.49490993586 54.228 2 -0.7580529393346483 0.23388486982658277 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 126295 14583 VLIATSTLAWG True PC9_epitope_Rep1 1130.63356010902 1130.6324699358602 60.916 2 -0.7581048231550161 0.23388486982658277 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 5002 7991 ALHVALQRHQL True PC9_epitope_Rep5 1284.7414878485602 1284.73984490379 35.676 3 -0.7581081124990284 0.23388486982658277 1.0 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'ENST00000511502.5_1_1:1563563-1565907:+|nuORF', 'ENST00000506488.5_1_1:1562112-1565907:+|nuORF'] 129832 13268 VRRLVKILLLG True PC9_epitope_Rep4 1278.8863611770998 1278.8847149037902 58.933 3 -0.7582016111231734 0.23392312565375606 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 42658 8858 IEHMQMDKP True PC9_epitope_Rep2 1127.51035082519 1127.50924993586 39.424 2 -0.758236884732331 0.23392312565375606 1.0 ['ENST00000531569.1_1_11:35936821-35939650:-|nuORF'] 121780 7073 VFPAAPGP True H1975_Epitope_Rep2 754.4013753462199 754.40026993586 32.135 2 -0.7582395125533893 0.23392312565375606 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 112003 15431 TIRRLQRY True PC9_epitope_Rep3 1104.651610215 1104.65050993586 64.509 2 -0.7582626811882793 0.23392312565375606 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 123750 16592 VGRHQRGR True NCI_RA007_Epitope_Rep3 964.5427284723598 964.54217496793 73.049 1 -0.758272612701884 0.23392312565375606 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 128144 5034 VPLNWLRSRPY True PC9_epitope_Rep3 1399.77245362367 1399.7707949037901 24.452 3 -0.7583019178404292 0.23392312565375606 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 71601 5021 MDHVNEVYVKE True PC9_epitope_Rep5 1361.6285513815703 1361.62690490379 24.345 3 -0.7583211152516741 0.23392941315107235 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 28637 12670 FSLATEPGL True NCI_RA007_Epitope_Rep3 933.4807478657299 933.47964993586 57.08 2 -0.7583260963507978 0.23392941315107235 1.0 ['ENST00000267102.12_1_12:49495282-49496146:-|nuORF'] 45240 20393 IPTPASLLQ True PC9_epitope_Rep3 938.54368247546 938.5431349679301 83.692 1 -0.7584186065590964 0.23392941315107235 1.0 ['ENST00000479835.1_1_7:75362785-75368238:-|nuORF'] 72140 8495 MFTLQKFRLQK True NCI_RA007_Epitope_Rep4 1438.8118759074998 1438.8107699358602 39.478 2 -0.7584207720042646 0.23392941315107235 1.0 ['ENST00000226725.10_1_4:166160001-166184388:+|nuORF'] 123526 15769 VGPMLEPSV True PC9_epitope_Rep6 927.47355431031 927.47244993586 72.898 2 -0.7584260286329247 0.23392941315107235 1.0 ['ENSG00000171405|ENST00000375501|XAGE5'] 68667 14573 LTIYDARP True PC9_epitope_Rep3 947.5076313199099 947.50652993586 61.182 2 -0.7584336247783536 0.23392941315107235 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 44351 3944 ILDWDYYIER True NCI_RA007_Epitope_Rep2 1384.66631678928 1384.6646849037902 19.977 3 -0.7584545416457884 0.23392941315107235 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 83055 18887 PSLLDYLTM True NCI_RA007_Epitope_Rep5 1051.5259838059899 1051.52547496793 79.495 1 -0.7584833622388786 0.23392941315107235 1.0 ['ENSG00000160539|ENST00000372264|PLPP7'] 37239 16239 GVRIKRTS True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56084496793 71.564 1 -0.7585510882665448 0.23392941315107235 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 109581 7836 TDWILERDP True H1975_Epitope_Rep1 1143.5560380643099 1143.5549499358601 35.091 2 -0.7585556568963824 0.23392941315107235 1.0 ['ENSG00000153140|ENST00000283122|CETN3'] 97334 5926 SEAQELASP True H1975_Epitope_Rep2 930.4294405688598 930.42834993586 27.779 2 -0.758570481369326 0.23392941315107235 1.0 ['ENST00000326035.6_1_5:43192469-43245235:+|nuORF', 'ENST00000509362.5_1_5:43192436-43240395:+|nuORF'] 64405 23776 LPLVIKLAFK True NCI_RA007_Epitope_Rep3 1140.7634520797599 1140.76180490379 103.05 3 -0.7586638114669054 0.23401089998527028 1.0 ['OR4K13|p.C189F|1|0.19|ENSG00000176253|chr14:20034193-20034193|C/A|missense_variant'] 38364 16087 HEILQWVL True NCI_RA007_Epitope_Rep4 1036.5705659296398 1036.56946993586 69.77 2 -0.7586905112770184 0.23401089998527028 1.0 ['ENSG00000108829|ENST00000225972|LRRC59'] 28423 8844 FSASGKPV True NCI_RA007_Epitope_Rep1 791.41775368635 791.41664993586 38.4 2 -0.7587066626856618 0.23401184198898284 1.0 ['ENSG00000112893|ENST00000261483|MAN2A1'] 33930 13634 GLRPQLVA True PC9_epitope_Rep1 852.5181364339599 852.51702993586 57.299 2 -0.7587072148141007 0.23401184198898284 1.0 ['ENST00000543196.6_1_12:51773598-51777285:-|nuORF', 'ENST00000356317.7_1_12:51773598-51784704:-|nuORF'] 137620 6262 YEFYHYVKEQF True H1975_Epitope_Rep1 1551.7034305739896 1551.70232993586 29.157 2 -0.7587169791386396 0.23401184198898284 1.0 ['ENST00000466695.1_1_6:149387353-149395249:+|nuORF', 'ENSG00000111962|ENST00000367463|UST'] 60326 9973 LGSKEDTVI True PC9_epitope_Rep1 960.5127762699999 960.51166993586 43.225 2 -0.7587186644356221 0.23401184198898284 1.0 ['ENSG00000144843|ENST00000357003|ADPRH', 'ENST00000471850.1_1_3:119298364-119306722:+|nuORF'] 79385 6472 PASPATAAP True PC9_epitope_Rep1 781.39701824177 781.39592993586 29.7 2 -0.7587993471991302 0.23402312394138008 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 30434 21072 GAEVIWYKG True PC9_epitope_Rep5 1021.5232813840499 1021.52218993586 86.114 2 -0.7588932285257632 0.23403095865796722 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 126729 25982 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 107.54 3 -0.7588954615851726 0.23403095865796722 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 135231 3701 WFHFKRYRYRR True NCI_RA007_Epitope_Rep2 1713.9116814914898 1713.91003490379 19.043 3 -0.7589348212382803 0.2340682484278119 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 85227 9785 QEQEEEQKPRR True NCI_RA007_Epitope_Rep1 1455.7066184614696 1455.70552993586 42.064 2 -0.7589370137502011 0.2340682484278119 1.0 ['nc|ENSG00000174796|Q8TBB0-3|THAP6'] 117614 11888 TVTEITLI True NCI_RA007_Epitope_Rep3 888.5167990212799 888.51570993586 53.893 2 -0.758960502265343 0.23407263409030662 1.0 ['ENSG00000196099|ENST00000309154|OR6M1', 'OR6M1|p.S5G|1|0.06|ENSG00000196099|chr11:123806337-123806337|T/C|missense_variant'] 62982 19076 LLPLSELSP True PC9_epitope_Rep2 967.55899818643 967.55790993586 78.741 2 -0.7589769053663195 0.23407263409030662 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-3|UBR2'] 119092 6769 VAGPWGWEG True PC9_epitope_Rep3 957.4344663796498 957.43336993586 31.058 2 -0.7589773453705695 0.23407263409030662 1.0 ['ENST00000598660.1_1_19:18723732-18729158:+|nuORF'] 12564 5189 DKSEWGLGVC True H1975_Epitope_Rep3 1092.4909952796 1092.4898899358602 25.055 2 -0.7589914497773692 0.23407701936528974 1.0 ['TRIM68|p.R367K|1|0.17|ENSG00000167333|chr11:4600634-4600634|C/T|missense_variant'] 65698 7414 LSASSKVP True PC9_epitope_Rep2 787.44396843419 787.44286993586 33.895 2 -0.7590264357536467 0.23407701936528974 1.0 ['nc|ENSG00000065361|P21860-2|ERBB3'] 31724 10878 GEGQGHRAWGW True NCI_RA007_Epitope_Rep1 1239.5533527257098 1239.5522499358601 46.304 2 -0.7590552794473918 0.23407701936528974 1.0 ['ENST00000530791.5_1_11:65687742-65688356:+|nuORF'] 139496 14710 YLSCYDFL True PC9_epitope_Rep1 1022.4419198288599 1022.4413749679301 61.402 1 -0.759112312274248 0.23411430338551253 1.0 ['L3MBTL4|p.W128L|1|0.18|ENSG00000154655|chr18:6243371-6243371|C/A|missense_variant'] 46048 10028 ISGLQDEL True H1975_Epitope_Rep1 873.4443623570099 873.44326993586 43.511 2 -0.7591279187581677 0.23411430338551253 1.0 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'ENST00000482343.5_1_1:149901023-149901224:-|nuORF'] 103183 14503 SPIFLGGV True NCI_RA007_Epitope_Rep5 788.4432401581998 788.44269496793 62.464 1 -0.7591447719544813 0.23414030747481887 1.0 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|79', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|79'] 56824 10482 LDNMYDAR True PC9_epitope_Rep1 996.4334804034798 996.43238993586 45.207 2 -0.7591827435688061 0.23414124160678526 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 37686 3372 GVYHRNPLIRK True H1975_Epitope_Rep3 1351.78368701371 1351.78204490379 17.781 3 -0.7592278476768258 0.23414124160678526 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2'] 129834 12544 VRRLVKILLLG True PC9_epitope_Rep6 1278.8863611770998 1278.8847149037902 59.685 3 -0.7592522119835747 0.23414124160678526 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 57258 9452 LDYEIRYYEKE True PC9_epitope_Rep1 1519.7194745609497 1519.71781490379 41.213 3 -0.7592713253718985 0.23414124160678526 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1'] 67035 8146 LSPSMGHPLEV True NCI_RA007_Epitope_Rep4 1165.5801446371702 1165.5790499358602 38.123 2 -0.7593353446860033 0.23414217562871784 1.0 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 122008 23442 VFVIYKFKRR True H1975_Epitope_Rep1 1354.8237609205398 1354.8226699358602 97.416 2 -0.7593419055822079 0.23414217562871784 1.0 ['ENSG00000108018|ENST00000263054|SORCS1', 'SORCS1|p.V1126I|1|0.11|ENSG00000108018|chr10:106577551-106577551|C/T|missense_variant'] 109206 12490 TAQSVQNPE True NCI_RA007_Epitope_Rep2 972.4512386426 972.4506949679301 53.195 1 -0.7593448118030048 0.23414217562871784 1.0 ['ENSG00000124574|ENST00000372530|ABCC10', 'nc|ENSG00000124574|Q5T3U5-2|ABCC10'] 56739 5664 LDLKGNLAP True H1975_Epitope_Rep3 939.5389314481899 939.53782993586 26.816 2 -0.7593501169295722 0.23414217562871784 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|182|3|sense'] 95026 18913 RTRPPRLTP True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 78.515 2 -0.7594125136274291 0.23419762356994567 1.0 ['ENST00000167106.8_2_14:77228891-77229116:+|nuORF'] 9356 8406 AVSALSKVIS True PC9_epitope_Rep2 973.58079626017 973.57968993586 37.705 2 -0.7594142805465183 0.23420889896640065 1.0 ['nc|ENSG00000108389|Q9NYA4|MTMR4', 'ENSG00000108389|ENST00000682306|MTMR4'] 9370 11976 AVSFGSLQGAF True PC9_epitope_Rep1 1082.5396597241797 1082.53856993586 50.928 2 -0.7595901257377978 0.23424617196702002 1.0 ['ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS'] 65559 27615 LRRRRFKMRRM True PC9_epitope_Rep5 1604.9456415553998 1604.9440049037898 113.53 3 -0.7595925654351704 0.23424617196702002 1.0 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 71673 23187 MECCCCCCEE True PC9_epitope_Rep4 1154.23393756886 1154.23282993586 97.417 2 -0.759617173178606 0.23425744615067504 1.0 ['ENSG00000170775|ENST00000303921|GPR37'] 101136 14636 SLGQRVLL True PC9_epitope_Rep2 884.5443511817999 884.54324993586 61.565 2 -0.7596327493180086 0.23426527096859678 1.0 ['nc|ENSG00000178149|Q5D0E6-3|DALRD3', 'ENST00000498794.1_1_3:49055454-49055997:-|nuORF', 'ENST00000484831.5_1_3:49054806-49055997:-|nuORF', 'ENST00000460505.5_1_3:49053470-49055997:-|nuORF', 'nc|ENSG00000178149|Q5D0E6-2|DALRD3', 'ENSG00000178149|ENST00000341949|DALRD3'] 22055 13123 ESLPTMFSML True PC9_epitope_Rep5 1154.5351685907 1154.53406993586 55.482 2 -0.7596673492187651 0.23426527096859678 1.0 ['ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 34602 12067 GPVDRVETTR True NCI_RA007_Epitope_Rep4 1128.58873517492 1128.5870849037901 53.415 3 -0.7597463151545526 0.23429656563277443 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 81554 14959 PLKGIKSVI True PC9_epitope_Rep4 953.62735252977 953.62624993586 65.479 2 -0.7597565341406876 0.23429656563277443 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'nc|ENSG00000183605|Q6P4A7-3|SFXN4', 'SFXN4|p.P137S|1|0.23|ENSG00000183605|chr10:119158014-119158014|G/A|missense_variant'] 85593 11951 QGGSKPRSRKD True PC9_epitope_Rep5 1214.6479813865399 1214.6468899358601 50.967 2 -0.759794794196782 0.23429656563277443 1.0 ['ENST00000335500.8_1_17:42478071-42478113:-|nuORF'] 22678 8074 ETQLLGGEGLK True H1975_Epitope_Rep3 1143.6135529404298 1143.61244993586 36.031 2 -0.7598140867236063 0.23429656563277443 1.0 ['ENST00000372309.7_2_9:133998139-133998367:+|nuORF'] 116786 19420 TVDWDEWKYYF True PC9_epitope_Rep3 1550.67179609254 1550.67068993586 79.925 2 -0.7598190113122215 0.23429656563277443 1.0 ['ENST00000411846.6_1_1:108815923-108880006:+|nuORF'] 70625 25893 LWHIWRERN True NCI_RA007_Epitope_Rep2 1308.68397297244 1308.68233490379 109.76 3 -0.7598208115927287 0.23429656563277443 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 32972 7309 GIEDISPNLSP True H1975_Epitope_Rep2 1140.5662683948399 1140.56516993586 33.053 2 -0.7598296034863034 0.23429656563277443 1.0 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1', 'ENST00000411772.5_2_15:43699583-43738985:-|nuORF', 'ENST00000571145.1_1_15:43708608-43712911:-|nuORF'] 79634 14698 PDNEEGLKIR True H1975_Epitope_Rep3 1169.6040508858898 1169.6029499358601 61.908 2 -0.7598486503972769 0.23429656563277443 1.0 ['ENST00000417753.5_1_3:48557182-48594149:-|nuORF', 'nc|ENSG00000114268|Q16877-3|PFKFB4', 'ENSG00000114268|ENST00000232375|PFKFB4', 'ENST00000496767.5_1_3:48586091-48599213:-|nuORF', 'ENST00000490115.5_1_3:48586091-48594264:-|nuORF', 'nc|ENSG00000114268|Q16877-2|PFKFB4'] 20632 10254 EPVQQAAVP True PC9_epitope_Rep1 937.4868958753298 937.48578993586 44.325 2 -0.7598946234056515 0.23430783724901372 1.0 ['nc|ENSG00000145014|Q2T9K0-4|TMEM44'] 97908 4526 SEMNRIYTLFL True H1975_Epitope_Rep3 1385.70132239901 1385.69968490379 22.53 3 -0.7599762642589983 0.23432003179416225 1.0 ['ENSG00000085788|ENST00000397166|DDHD2', 'ENST00000531344.1_1_8:38099790-38103488:+|nuORF'] 124869 14904 VHLINVDIT True PC9_epitope_Rep4 1022.5760452329 1022.57494993586 65.269 2 -0.7599821475117986 0.23432003179416225 1.0 ['ENST00000261192.11_1_12:24966871-24966931:-|nuORF'] 84077 4286 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 21.463 2 -0.7599826583804777 0.23432003179416225 1.0 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 121735 17617 VFLPKDVALA True PC9_epitope_Rep2 1071.63283183303 1071.6317299358602 73.043 2 -0.7599879764539915 0.23432003179416225 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 109026 9670 TAIEEHLGKFG True PC9_epitope_Rep2 1200.6138872935999 1200.61278993586 42.533 2 -0.759991244477141 0.23432003179416225 1.0 ['ENST00000469911.1_1_3:182328694-182329198:+|nuORF'] 110288 7353 TESHQREIPLP True H1975_Epitope_Rep2 1305.66771377161 1305.6666099358602 33.223 2 -0.7600212354595207 0.2343460213724278 1.0 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 98201 7280 SETKDADWSV True H1975_Epitope_Rep3 1136.4985827578398 1136.4974899358601 32.977 2 -0.7600410152220353 0.23435729109936856 1.0 ['ENST00000388833.7_1_16:67841261-67854833:+|nuORF', 'ENST00000568990.5_1_16:67840937-67854833:+|nuORF'] 113400 7189 TLSDIREGAP True H1975_Epitope_Rep2 1057.54038800017 1057.53928993586 32.587 2 -0.7601204454709041 0.23439799823373564 1.0 ['nc|ENSG00000104936|Q09013-12|DMPK', 'nc|ENSG00000104936|Q09013-10|DMPK', 'nc|ENSG00000104936|Q09013-11|DMPK', 'nc|ENSG00000104936|Q09013-15|DMPK', 'ENSG00000104936|ENST00000291270|DMPK', 'nc|ENSG00000104936|Q09013-16|DMPK', 'nc|ENSG00000104936|Q09013-2|DMPK', 'nc|ENSG00000104936|Q09013-8|DMPK', 'ENST00000596686.5_1_19:46273741-46282867:-|nuORF', 'nc|ENSG00000104936|Q09013-5|DMPK', 'nc|ENSG00000104936|Q09013-7|DMPK', 'nc|ENSG00000104936|Q09013-6|DMPK', 'nc|ENSG00000104936|Q09013-1|DMPK'] 101984 21261 SLQITRISAF True PC9_epitope_Rep1 1134.6397081186199 1134.6386099358601 86.606 2 -0.7601581086359239 0.23442398551684548 1.0 ['ENSG00000011201|ENST00000262648|ANOS1'] 66648 9622 LSKPVAKNL True H1975_Epitope_Rep3 968.60186605792 968.60076993586 42.026 2 -0.7602250415422895 0.23443616989962618 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 48787 18203 KDLRQPLERMW True PC9_epitope_Rep5 1470.7765530279398 1470.77544993586 75.028 2 -0.7602278629146645 0.23443616989962618 1.0 ['DAOA|p.R122L|1|0.43|ENSG00000182346|chr13:105489984-105489984|G/T|missense_variant'] 20595 11568 EPSRACGK True PC9_epitope_Rep1 846.4017863523799 846.40068993586 49.376 2 -0.7602301365800237 0.23443616989962618 1.0 ['ENST00000483591.6_1_6:16486245-16486323:-|nuORF'] 79561 6909 PDEQYDFLFK True H1975_Epitope_Rep1 1300.59756852312 1300.5964699358601 31.617 2 -0.7602576144635155 0.23443616989962618 1.0 ['nc|ENSG00000172780|Q86YS6-2|RAB43', 'ENSG00000172780|ENST00000315150|RAB43'] 37739 12839 GWPGAGPL True PC9_epitope_Rep2 753.38097425481 753.37986993586 54.686 2 -0.760261989578421 0.23443616989962618 1.0 ['ENSG00000181585|ENST00000643606|TMIE'] 56513 7449 LDFNPNKQYYL True NCI_RA007_Epitope_Rep2 1413.69286589029 1413.69176993586 33.6 2 -0.760335540515933 0.23445870371460528 1.0 ['ENST00000496433.5_1_2:3193107-3197993:-|nuORF', 'ENSG00000032389|ENST00000382125|EIPR1'] 98379 13426 SEYQSVKLVGP True H1975_Epitope_Rep1 1205.6292030045697 1205.62810993586 56.756 2 -0.7603451819754727 0.23445870371460528 1.0 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 32702 6880 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.37484993586 33.144 2 -0.760372487328887 0.23448468704469527 1.0 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 98658 19078 SGAVETKLQAI True PC9_epitope_Rep3 1115.6186383208699 1115.61754993586 78.606 2 -0.7604117102154947 0.23448560034141244 1.0 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6', 'nc|ENSG00000124587|Q13608-2|PEX6'] 101878 6068 SLPPKPSR True NCI_RA007_Epitope_Rep5 880.51305105352 880.51194993586 30.024 2 -0.7604271798677105 0.23448560034141244 1.0 ['ENST00000571722.3_1_17:18966825-18967116:-|nuORF'] 102702 12681 SLYYHIRMSKM True PC9_epitope_Rep5 1427.70536223363 1427.70426993586 53.783 2 -0.7604309906170887 0.23448560034141244 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 56022 17714 LASNILILV True PC9_epitope_Rep4 954.61136811246 954.61026993586 76.162 2 -0.7604400116803359 0.23448560034141244 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2'] 123875 20571 VGRRKKGRRH True PC9_epitope_Rep6 1248.7751880186797 1248.77408993586 91.855 2 -0.760555799492493 0.2345704447125997 1.0 ['ENST00000470487.5_1_3:167813142-167813508:-|nuORF'] 135232 3811 WFHFKRYRYRR True NCI_RA007_Epitope_Rep2 1713.9116814914898 1713.91003490379 19.458 3 -0.7605864769293119 0.2345817084835553 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 41947 11995 IDEAILITWT True H1975_Epitope_Rep3 1173.6281403754099 1173.6270499358602 51.298 2 -0.7606063540992749 0.23460423503097547 1.0 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1', 'ENST00000494253.1_1_10:71098016-71144300:+|nuORF'] 66493 19024 LSHELWKVP True PC9_epitope_Rep1 1107.6076797143498 1107.60658993586 77.966 2 -0.7606112260072174 0.23460423503097547 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-1|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-2|TNRC6C', 'ENST00000592566.1_1_17:76094428-76098694:+|nuORF'] 30699 11890 GALESHFLK True PC9_epitope_Rep3 1000.5341804209199 1000.53308993586 50.755 2 -0.7606391851453569 0.2346414750069895 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000184486|ENST00000328345|POU3F2', 'nc|ENSG00000184486|P20265-3|POU3F2', 'nc|ENSG00000184486|P20265-2|POU3F2', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3'] 101090 10669 SLGIIRNSCCM True PC9_epitope_Rep1 1195.55117009135 1195.5500699358602 45.928 2 -0.7606394980798061 0.2346414750069895 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|313|2|anti-sense'] 45805 13325 ISDDIDDP True PC9_epitope_Rep6 888.3712569864 888.37014993586 62.912 2 -0.7606611768234754 0.23465273690406122 1.0 ['ENSG00000154059|ENST00000284202|IMPACT'] 38355 21461 HEIILKAAQE True PC9_epitope_Rep5 1150.6346227381798 1150.63352993586 87.588 2 -0.7607834281497047 0.23468652060680076 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 68984 7797 LTPNPDGP True H1975_Epitope_Rep3 809.3919328613299 809.39082993586 34.974 2 -0.7607841801664981 0.23468652060680076 1.0 ['nc|ENSG00000144868|Q6UXF1-2|TMEM108', 'ENST00000511388.1_1_3:133098579-133114827:+|nuORF', 'ENSG00000144868|ENST00000321871|TMEM108'] 86133 18903 QICLKTWIISI True NCI_RA007_Epitope_Rep3 1316.75262969588 1316.7509849037901 82.643 3 -0.7608093680626644 0.23468652060680076 1.0 ['ENST00000372724.5_1_10:76586363-76598485:+|nuORF'] 45544 12842 IQRQNEQM True H1975_Epitope_Rep3 1045.4974776423699 1045.4969749679299 54.619 1 -0.7608166701605084 0.23469778117827084 1.0 ['ENSG00000154451|ENST00000370459|GBP5', 'ENST00000481145.1_1_1:89726389-89728307:-|nuORF', 'GBP5|p.M515K|1|0.23|ENSG00000154451|chr1:89262323-89262323|A/T|missense_variant'] 106606 6579 STQDLPCM[Oxidation]IWP True H1975_Epitope_Rep2 1305.5733453850098 1305.57224993586 30.217 2 -0.7608361114081384 0.23472375487383212 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'EVC2|p.A873Pfs*18|1|0.61|ENSG00000173040|chr4:5618567-5618567|C/-|frameshift_variant'] 79456 13071 PAVPAAAGL True PC9_epitope_Rep4 765.43848913093 765.43738993586 58.17 2 -0.7608660591566679 0.23474972780507902 1.0 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 15127 8645 EAAAAGAF True H1975_Epitope_Rep1 706.32860432878 706.32805496793 38.182 1 -0.7609422079385862 0.23477569997204525 1.0 ['nc|ENSG00000215912|A8MYJ7|TTC34', 'ENSG00000215912|ENST00000401095|TTC34'] 53748 3711 KSQTKFYLEFH True NCI_RA007_Epitope_Rep2 1426.7245003717399 1426.72285490379 19.08 3 -0.7610161357615177 0.23481638418079095 1.0 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'nc|ENSG00000168918|Q92835-3|INPP5D'] 81351 16889 PLCLCVFV True H1975_Epitope_Rep2 892.4550677952 892.45396993586 70.208 2 -0.761042313339686 0.23482764201327075 1.0 ['ENST00000521195.1_1_8:104320096-104343734:+|nuORF', 'nc|ENSG00000164930|O60353-2|FZD6', 'ENSG00000164930|ENST00000358755|FZD6'] 18250 5607 EIQEAKAPSP True H1975_Epitope_Rep3 1068.54513902744 1068.5440499358601 26.608 2 -0.7611084389960565 0.2348942931544335 1.0 ['ENSG00000154710|ENST00000284957|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-4|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-3|RABGEF1'] 79574 5282 PDGLCQVSLQQ True H1975_Epitope_Rep3 1186.5652228490198 1186.5641299358601 25.399 2 -0.7611988166181015 0.2348942931544335 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370691.6_1_20:60885298-60889553:-|nuORF'] 135481 643 WIIYGVFPFI True NCI_RA007_Epitope_Rep1 1253.68486740589 1253.68321490379 3.4104 3 -0.7612068861125596 0.23490554934384747 1.0 ['ENSG00000149742|ENST00000279178|SLC22A9'] 64744 10433 LPYPRRRP True H1975_Epitope_Rep3 1053.6195818107299 1053.61848993586 45.19 2 -0.7612811894923183 0.23492114864069671 1.0 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1'] 25107 11348 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 51.751 2 -0.7612889194694942 0.23492114864069671 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 9153 15883 AVLDRNVAI True PC9_epitope_Rep2 969.5607295219299 969.55962993586 66.349 2 -0.7613014356132015 0.23492114864069671 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 113903 6327 TNQWQRTAPGP True H1975_Epitope_Rep3 1254.6105332486597 1254.6094299358601 29.33 2 -0.7613071778575163 0.23492114864069671 1.0 ['ENST00000564642.1_1_16:2042626-2043070:+|nuORF', 'ENSG00000127561|ENST00000248121|SYNGR3'] 69059 17518 LTQMLRALAT True PC9_epitope_Rep1 1116.6325145631997 1116.6314099358601 72.177 2 -0.7614115805241919 0.23494711446518676 1.0 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000489994.5_1_7:112107978-112115571:+|nuORF'] 142574 20302 YYLNGHWTLDW True PC9_epitope_Rep4 1466.6619001151798 1466.66080993586 86.234 2 -0.7614316742804268 0.23495491254652173 1.0 ['ADAMTS16|p.V803L|1|0.1|ENSG00000145536|chr5:5239809-5239809|G/C|missense_variant'] 20455 13576 EPHKEVSCL True PC9_epitope_Rep1 1040.4960806600398 1040.49498993586 57.076 2 -0.7614446769272495 0.23495491254652173 1.0 ['RSAD2|p.R282P|1|0.22|ENSG00000134321|chr2:6890282-6890282|G/C|missense_variant'] 107621 10778 SVPQEETLR True NCI_RA007_Epitope_Rep2 1057.54038800017 1057.53987496793 46.525 1 -0.7614742463743592 0.23498087672844956 1.0 ['ENSG00000196453|ENST00000247930|ZNF777'] 142071 27877 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 115.52 3 -0.7615210091391427 0.23500684014651152 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 20225 10502 ENLIDYFIP True H1975_Epitope_Rep3 1122.55972646242 1122.5586299358602 45.46 2 -0.7615363717499397 0.23501809302462418 1.0 ['nc|ENSG00000186283|Q9H497-3|TOR3A', 'ENSG00000186283|ENST00000367627|TOR3A'] 81540 13423 PLIRQAPPV True PC9_epitope_Rep5 989.6022004110898 989.60110993586 56.647 2 -0.7616489748104348 0.23506310122672314 1.0 ['MAGEL2|p.V991*|1|0.22|ENSG00000254585|chr15:23644773-23644773|G/-|frameshift_variant', 'ENSG00000254585|ENST00000650528|MAGEL2'] 100528 10228 SLATTLTKI True PC9_epitope_Rep6 946.5698972233 946.56880993586 49.994 2 -0.7616744234181991 0.23506310122672314 1.0 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526191.1_1_11:14496007-14497407:-|nuORF'] 23898 8346 EYKNNYYGTSI True NCI_RA007_Epitope_Rep1 1350.6091958359798 1350.60808993586 36.464 2 -0.7616760258156903 0.23506310122672314 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'nc|ENSG00000150054|Q5T2T1-2|MPP7', 'ENST00000496637.6_1_10:28342996-28348461:-|nuORF'] 68824 12454 LTLSNHMSFH True NCI_RA007_Epitope_Rep5 1185.56007789893 1185.5589899358602 54.562 2 -0.7617277235237897 0.23506310122672314 1.0 ['ENSG00000127311|ENST00000247815|HELB', 'nc|ENSG00000127311|Q8NG08-2|HELB'] 135974 18102 WQKLIVWKFPP True NCI_RA007_Epitope_Rep5 1440.8281775946396 1440.8270899358602 76.431 2 -0.7617672523931716 0.23508906114404224 1.0 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 63864 15555 LNLWPVPHGL True PC9_epitope_Rep5 1144.6393141958 1144.63820993586 64.842 2 -0.7617933354510823 0.2351003118197329 1.0 ['ENSG00000121879|ENST00000263967|PIK3CA', 'PIK3CA|p.E453Q|1|0.51|ENSG00000121879|chr3:179210291-179210291|G/C|missense_variant'] 56054 9465 LASVSSTPP True H1975_Epitope_Rep2 857.44944773745 857.4488949679301 41.375 1 -0.7618657289992752 0.2351228121782615 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'OTOF|p.D823Efs*3|1|0.24|ENSG00000115155|chr2:26477226-26477226|G/-|frameshift_variant', 'OTOF|p.R1068Pfs*78|1|0.26|ENSG00000115155|chr2:26474598-26474598|C/-|frameshift_variant'] 14809 15006 DVQRILSQI True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 69.744 2 -0.761870016336505 0.2351228121782615 1.0 ['nc|ENSG00000089847|Q8TF21-2|ANKRD24', 'ENSG00000089847|ENST00000318934|ANKRD24'] 20903 8244 EQLRCHFTWE True NCI_RA007_Epitope_Rep2 1347.6030053400698 1347.60190993586 36.704 2 -0.7619307487396472 0.23513060360042357 1.0 ['IFIT1|p.S394Yfs*3|1|0.1|ENSG00000185745|chr10:89403455-89403456|-/ATGG|frameshift_variant', 'ENSG00000185745|ENST00000371804|IFIT1'] 137852 17733 YESINYIF True H1975_Epitope_Rep2 1047.4913125494297 1047.4907749679298 73.532 1 -0.761952715423787 0.23513060360042357 1.0 ['nc|ENSG00000168803|Q6DHV7-3|ADAL', 'ENSG00000168803|ENST00000562188|ADAL', 'ENST00000566154.1_1_15:43643891-43644140:+|nuORF'] 39649 18946 HLPKLSITGTY True PC9_epitope_Rep5 1228.6815729306 1228.67992490379 77.899 3 -0.7619997377932781 0.23514185283779213 1.0 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 94167 14825 RRPGPGGK True NCI_RA007_Epitope_Rep3 823.4776686043099 823.47656993586 65.741 2 -0.7620285777469744 0.23515743341618012 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A'] 98443 6111 SFFLCCWMR True PC9_epitope_Rep1 1191.50276334695 1191.50110490379 28.32 3 -0.7620335251568656 0.23515743341618012 1.0 ['ENST00000421422.1_2_20:39811252-39811324:-|nuORF'] 35108 8350 GQVQVLKV True PC9_epitope_Rep2 869.5334521449299 869.53234993586 37.488 2 -0.762035596915799 0.23515743341618012 1.0 ['nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENSG00000086200|ENST00000325324|IPO11'] 136410 15660 WTTYYEISA True NCI_RA007_Epitope_Rep4 1132.5076908895599 1132.50717496793 68.021 1 -0.7620406670446608 0.23515743341618012 1.0 ['PTPRO|p.A584S|1|0.25|ENSG00000151490|chr12:15516927-15516927|G/T|missense_variant'] 110090 9998 TELYDYYYYED True PC9_epitope_Rep3 1535.59802201559 1535.59692993586 43.412 2 -0.762109090026773 0.23519809406159004 1.0 ['ENSG00000171502|ENST00000370571|COL24A1', 'nc|ENSG00000171502|Q17RW2-2|COL24A1', 'COL24A1|p.E886Kfs*50|1|0.17|ENSG00000171502|chr1:85909964-85909964|C/-|frameshift_variant'] 17913 9851 EIAFPDRR True H1975_Epitope_Rep1 1002.5246783663799 1002.52358993586 42.824 2 -0.762188855447575 0.23526124615814473 1.0 ['ENST00000570308.5_1_16:55539636-55539948:+|nuORF'] 111694 10576 TIFLCMETHY True H1975_Epitope_Rep3 1256.55696666444 1256.55586993586 45.749 2 -0.7621929436407192 0.23526124615814473 1.0 ['nc|ENSG00000147533|Q7Z5G4-3|GOLGA7', 'ENSG00000147533|ENST00000357743|GOLGA7'] 113636 20047 TLVVAVFLAP True PC9_epitope_Rep2 1028.6270181766 1028.62592993586 82.517 2 -0.7621950254208467 0.23526124615814473 1.0 ['GPR45|p.F205L|1|0.17|ENSG00000135973|chr2:105242473-105242473|C/G|missense_variant'] 133283 18620 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 78.436 2 -0.7622482485333145 0.23527249198552982 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 58880 3688 LETAGVAR True NCI_RA007_Epitope_Rep4 815.45011644379 815.44900993586 20.297 2 -0.7623596176331163 0.23532439268278338 1.0 ['ENST00000473515.5_1_6:108067761-108070999:-|nuORF'] 66394 15473 LSGKRLSSGFG True PC9_epitope_Rep1 1107.6036569630699 1107.60254993586 64.338 2 -0.7623811521073713 0.23532439268278338 1.0 ['ENSG00000064999|ENST00000360359|ANKS1A', 'nc|ENSG00000064999|Q92625-2|ANKS1A'] 124906 14802 VHPRVGRRRRS True H1975_Epitope_Rep3 1374.8181154598199 1374.8164649037901 62.314 3 -0.7624030160453305 0.23533563708550842 1.0 ['ENST00000597790.5_1_19:50879837-50880852:+|nuORF'] 639 11421 AASSSVLALR True PC9_epitope_Rep3 973.5556441414899 973.55454993586 48.931 2 -0.7625046105038867 0.2354056994971032 1.0 ['ENST00000582233.1_1_18:29671870-29672068:-|nuORF'] 137541 15490 YEELLKHDTNI True NCI_RA007_Epitope_Rep2 1373.6826951294097 1373.68158993586 64.957 2 -0.7625251389211112 0.23541694237357919 1.0 ['ENST00000415495.5_1_19:42311603-42315272:+|nuORF', 'ENSG00000170956|ENST00000357396|CEACAM3'] 118857 8323 VAASTGIDLL True PC9_epitope_Rep2 958.53351171458 958.53240993586 37.381 2 -0.7625703466442488 0.23543682183079953 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 97199 2614 SDYERLEHGT True PC9_epitope_Rep2 1205.5312798684497 1205.53018993586 14.712 2 -0.7625734330498992 0.23543682183079953 1.0 ['ENSG00000133812|ENST00000256190|SBF2'] 81750 10344 PLPGRDEGP True PC9_epitope_Rep1 936.4664947839199 936.46538993586 44.669 2 -0.7625877504955242 0.23543682183079953 1.0 ['nc|ENSG00000175221|Q9Y2X0-3|MED16'] 86242 19006 QIMEDLRTL True PC9_epitope_Rep1 1117.58014463717 1117.5790499358602 77.895 2 -0.7625998266221783 0.23543682183079953 1.0 ['ENSG00000111707|ENST00000543473|SUDS3'] 126727 25818 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 106.85 3 -0.7626035727545117 0.23543682183079953 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 62357 17818 LLGMDRPDSL True PC9_epitope_Rep1 1115.56449457303 1115.5633899358602 73.332 2 -0.7626089850010016 0.23543682183079953 1.0 ['ENSG00000130054|ENST00000252338|NALF2'] 38826 11231 HHARREPL True PC9_epitope_Rep6 1014.5471451464599 1014.54604993586 54.198 2 -0.7626149909519788 0.23543682183079953 1.0 ['ENSG00000178015|ENST00000380007|GPR150'] 83164 17558 PSSLLLPLCL True H1975_Epitope_Rep1 1054.6096538603 1054.60907496793 73.046 1 -0.7626650737016234 0.23544460127028935 1.0 ['ENST00000392547.6_1_2:175427117-175427267:-|nuORF'] 94330 17341 RRRKTKSVP True H1975_Epitope_Rep2 1126.70470841702 1126.7036099358602 71.996 2 -0.7626654062943595 0.23544460127028935 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 135523 25034 WKKKKKKKK True H1975_Epitope_Rep2 1228.8495817455598 1228.84848993586 102.87 2 -0.7626890987758175 0.23544891868448523 1.0 ['ENST00000433510.2_1_17:46713876-46724046:-|nuORF'] 130489 22110 VSPRGRGP True PC9_epitope_Rep2 824.461684187 824.46058993586 90.52 2 -0.7627004974720775 0.23544891868448523 1.0 ['ENST00000375412.9_2_9:96214723-96215017:-|nuORF'] 71945 18364 MERRRERRERR True PC9_epitope_Rep1 1628.8866060258 1628.88550993586 75.428 2 -0.762721847974685 0.23544891868448523 1.0 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4'] 53632 9110 KRYAWKRRWFV True NCI_RA007_Epitope_Rep2 1594.8997198254597 1594.8980849037903 40.041 3 -0.7628293266838281 0.23545669719645404 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 30385 15832 GADSVIME True H1975_Epitope_Rep1 820.36366950816 820.36312496793 66.206 1 -0.7628515194447139 0.23545669719645404 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 113985 21671 TPAIARGRLG True PC9_epitope_Rep3 1010.5985120129799 1010.59740993586 88.655 2 -0.7628982785878832 0.23546447525101805 1.0 ['ENST00000369295.3_1_10:115805063-115805390:+|nuORF'] 132640 6571 VVFSEDEMKKF True H1975_Epitope_Rep1 1357.6587888806896 1357.6576899358602 30.335 2 -0.7629504633909271 0.23546447525101805 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 113101 9838 TLNVEQAAYTR True H1975_Epitope_Rep3 1264.6411646706 1264.64006993586 42.871 2 -0.763010405881669 0.23546879134448592 1.0 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595191.1_1_19:8614980-8615536:-|nuORF', 'ENST00000600825.1_1_19:8612859-8615196:-|nuORF'] 117152 16816 TVLARMVSI True PC9_epitope_Rep6 988.57393705792 988.57282993586 77.191 2 -0.763012095992065 0.23546879134448592 1.0 ['ENST00000487364.1_1_19:19771386-19774475:-|nuORF', 'chr1:151185950-151194923|191|12.55|0.48|4.7|-|2|TE_info:AluSc8,AluSc8_dup1115,Alu,SINE,donor,+,151194923,151195210|VPS72,None|3', 'AluSc_dup13832|chr7:33006087-33006413:-|2.242044650319211|0.4159080058002372|2.43|536.0|13|1|anti-sense', 'ENST00000434453.1_1_7:156616573-156629563:-|nuORF'] 34253 17656 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 74.698 2 -0.7630360797530613 0.23546879134448592 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 123029 14325 VGIMMIII True PC9_epitope_Rep4 888.51766805176 888.51656993586 63.003 2 -0.7630809668504601 0.23547656847180573 1.0 ['ENSG00000085365|ENST00000621999|SCAMP1'] 35535 3525 GSSGKTSK True NCI_RA007_Epitope_Rep2 750.38718183406 750.38608993586 18.361 2 -0.7631030468790845 0.23547656847180573 1.0 ['ENST00000550612.1_1_12:31014923-31015109:+|nuORF'] 107882 7231 SVVNAGSL True NCI_RA007_Epitope_Rep3 745.3970182417701 745.39646496793 35.553 1 -0.7631546933281013 0.23550250628408473 1.0 ['ENSG00000135917|ENST00000644224|SLC19A3'] 88916 9494 QVFNSTSNL True PC9_epitope_Rep4 1008.48762415132 1008.48652993586 44.131 2 -0.7631595200043484 0.23550335866417768 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 118459 16286 TYPKIWVKV True PC9_epitope_Rep1 1132.66446631448 1132.6633699358601 67.462 2 -0.7632110715850682 0.23550335866417768 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 33824 10702 GLNDILVK True NCI_RA007_Epitope_Rep2 870.51746772762 870.51636993586 46.229 2 -0.7632711272021482 0.23550335866417768 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 44859 8376 INGTVYLSEKD True H1975_Epitope_Rep1 1237.6190322436898 1237.61792993586 37.146 2 -0.7632829003971394 0.23550335866417768 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'PCDH9|p.L1216Wfs*4|1|0.35|ENSG00000184226|chr13:66304723-66304723|G/-|frameshift_variant', 'ENSG00000184226|ENST00000377865|PCDH9'] 125721 21828 VKRLLKKQVVR True NCI_RA007_Epitope_Rep4 1365.92962297141 1365.92797490379 94.622 3 -0.7633484368288938 0.23551459564335478 1.0 ['ENSG00000175931|ENST00000319380|UBE2O'] 63372 11532 LLVCFPLL True NCI_RA007_Epitope_Rep5 916.5455970517598 916.54448993586 51.008 2 -0.7634097156639623 0.23552237050973016 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'OCA2|p.Q609Pfs*8|1|0.13|ENSG00000104044|chr15:27955176-27955177|-/T|frameshift_variant', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L518F|1|0.44|ENSG00000104044|chr15:27966774-27966774|G/A|missense_variant'] 32682 8084 GGSCCSHR True H1975_Epitope_Rep3 805.29594138485 805.2953949679301 36.069 1 -0.7634178321846349 0.23552237050973016 1.0 ['ENST00000484094.1_1_2:103414244-103431261:+|nuORF'] 67371 11252 LSSKEIKLL True PC9_epitope_Rep4 1029.6433965167298 1029.6422899358602 51.054 2 -0.7634440736545641 0.23556300248394257 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 126440 23725 VLKQKAKKRRR True H1975_Epitope_Rep2 1409.9419189906096 1409.94028490379 97.76 3 -0.7634520819163942 0.2355707755845912 1.0 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 57904 13163 LEGAVGNEESL True PC9_epitope_Rep1 1116.52988288612 1116.52878993586 55.497 2 -0.7634880055809781 0.2355707755845912 1.0 ['ENSG00000166450|ENST00000389286|PRTG'] 120483 13137 VEEVQNVI True PC9_epitope_Rep2 928.48656152216 928.48546993586 55.805 2 -0.7635452949642193 0.2355820105820106 1.0 ['nc|ENSG00000012048|P38398-6|BRCA1', 'nc|ENSG00000012048|P38398-5|BRCA1', 'nc|ENSG00000012048|P38398-3|BRCA1', 'ENSG00000012048|ENST00000357654|BRCA1', 'nc|ENSG00000012048|P38398-7|BRCA1', 'ENST00000493795.5_1_17:41276035-41277334:-|nuORF', 'nc|ENSG00000012048|P38398-2|BRCA1'] 6255 6762 APQYYDMSNFP True H1975_Epitope_Rep2 1331.54923843171 1331.54814993586 30.925 2 -0.7635760622961976 0.2356010170039534 1.0 ['ENSG00000109606|ENST00000336812|DHX15', 'ENST00000508032.5_1_4:24529549-24538851:-|nuORF', 'ENST00000512903.1_1_4:24529549-24534804:-|nuORF'] 19669 10444 ELRERFPSH True H1975_Epitope_Rep1 1169.5941549085298 1169.59304993586 45.127 2 -0.7635836330989824 0.2356010170039534 1.0 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2'] 20224 15971 ENLEYCIMV True H1975_Epitope_Rep3 1112.48821839828 1112.4871299358601 66.889 2 -0.7636289647150473 0.2356010170039534 1.0 ['ENST00000495014.5_1_10:135207724-135213140:+|nuORF', 'ENST00000473735.1_1_10:135208280-135215808:+|nuORF', 'nc|ENSG00000148824|Q9BT17-2|MTG1', 'ENST00000460848.5_1_10:135207724-135215322:+|nuORF', 'ENSG00000148824|ENST00000317502|MTG1'] 43952 6733 IIDYIFYSKPQ True H1975_Epitope_Rep1 1385.72310338941 1385.7220099358601 30.939 2 -0.7637963746588798 0.23565287677272392 1.0 ['ENSG00000113300|ENST00000261951|CNOT6'] 83528 19522 PTTLVDKV True PC9_epitope_Rep2 871.5014833103099 871.50038993586 80.476 2 -0.7638004301975351 0.23565287677272392 1.0 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 75864 18113 NLQFASLIQ True PC9_epitope_Rep4 1032.56039516876 1032.55928993586 77.738 2 -0.763827970693687 0.23566410957293596 1.0 ['ITGA11|p.P946Tfs*16|1|0.24|ENSG00000137809|chr15:68313813-68313825|GGAAGCGTAAGGG/-|frameshift_variant', 'ENSG00000137809|ENST00000315757|ITGA11', 'nc|ENSG00000137809|Q9UKX5-2|ITGA11'] 30634 4224 GAKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 22.622 3 -0.7638476280608261 0.23567187867387726 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 20534 12724 EPQVELRPR True PC9_epitope_Rep5 1122.6145559999397 1122.6134499358602 53.95 2 -0.7638696633268058 0.23567187867387726 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 64229 13605 LPGVAGAVG True PC9_epitope_Rep6 739.42283906679 739.42229496793 64.087 1 -0.7638918521055543 0.23567618403844176 1.0 ['ENSG00000164692|ENST00000297268|COL1A2', 'COL1A2|p.R882H|1|0.23|ENSG00000164692|chr7:94424415-94424415|G/A|missense_variant'] 21091 5034 EQYIRRIQQ True NCI_RA007_Epitope_Rep1 1232.66256882152 1232.66092490379 23.666 3 -0.7639140601553394 0.23567618403844176 1.0 ['ENST00000505362.1_1_5:98106807-98108727:-|nuORF', 'ENST00000501938.6_1_5:98106807-98108385:-|nuORF', 'ENST00000505677.1_1_5:98106807-98109161:-|nuORF', 'ENST00000515003.1_1_5:98106807-98108385:-|nuORF'] 81984 10915 PLTRRKSHD True H1975_Epitope_Rep1 1108.61013932584 1108.6090499358602 46.947 2 -0.7639155141138196 0.23567618403844176 1.0 ['KIF21B|p.Y1223H|1|0.13|ENSG00000116852|chr1:200986866-200986866|A/G|missense_variant'] 56167 18132 LAVTQLPGL True PC9_epitope_Rep6 910.5487678558998 910.54766993586 82.38 2 -0.7639605590386394 0.23571680479633222 1.0 ['ENST00000572418.1_1_17:3807220-3819678:-|nuORF', 'ENSG00000108405|ENST00000225538|P2RX1'] 81993 17003 PLTTTPRRRP True H1975_Epitope_Rep2 1193.69928868341 1193.69818993586 70.655 2 -0.7639970390295177 0.23574272993108314 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 25001 381 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 2.0344 2 -0.764025051450239 0.2357651899199177 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 13401 8583 DLYQEWKEKVP True H1975_Epitope_Rep3 1433.7190806381298 1433.71798993586 38.006 2 -0.7640385318047427 0.2357651899199177 1.0 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 111127 7816 THEQVFLQP True NCI_RA007_Epitope_Rep5 1097.5505587610498 1097.54946993586 36.765 2 -0.764096027425361 0.23579015410833126 1.0 ['ENSG00000158106|ENST00000289013|RHPN1', 'ENST00000522335.5_1_8:144462155-144464818:+|nuORF', 'ENST00000522899.1_1_8:144461534-144462449:+|nuORF'] 112459 7460 TLDGAIKHANF True NCI_RA007_Epitope_Rep2 1185.61422164677 1185.6131299358601 33.645 2 -0.7640979572789722 0.23579015410833126 1.0 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 67835 9340 LTAIPFWYHM True PC9_epitope_Rep6 1277.62670090677 1277.6256099358602 46.111 2 -0.7641187916251334 0.23579015410833126 1.0 ['nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 38162 8052 HDHRHAGNKP True PC9_epitope_Rep1 1167.56458611575 1167.5634899358602 35.794 2 -0.764161789179645 0.23579015410833126 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'ZNF808|p.Y483Lfs*8|1|0.09|ENSG00000198482|chr19:52554363-52554364|-/TGTCACATTCTTC|frameshift_variant', 'nc|ENSG00000189190|Q6ZNG1|ZNF600', 'ENSG00000189190|ENST00000692063|ZNF600', 'ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808'] 139721 12786 YNQDREENDKD True PC9_epitope_Rep3 1424.5804148888399 1424.57930993586 54.202 2 -0.7641862735591635 0.23579015410833126 1.0 ['EIF3A|p.D1212Y|1|0.16|ENSG00000107581|chr10:119038332-119038332|C/A|missense_variant'] 59746 5750 LGDRSKEYIRK True NCI_RA007_Epitope_Rep4 1363.7571974823497 1363.75555490379 28.736 3 -0.7641874411494793 0.23579015410833126 1.0 ['ENSG00000163376|ENST00000417314|KBTBD8'] 34254 22501 GNRHARRV True PC9_epitope_Rep3 964.54272847236 964.54162993586 91.825 2 -0.7641942551565406 0.23579015410833126 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 8649 4817 AVAEGAKN True NCI_RA007_Epitope_Rep1 758.3922672145001 758.39116993586 22.819 2 -0.7641994932747765 0.23579015410833126 1.0 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2', 'nc|ENSG00000123143|Q16512-3|PKN1', 'ENST00000585839.5_1_19:14544333-14578454:+|nuORF', 'ENSG00000123143|ENST00000242783|PKN1', 'nc|ENSG00000123143|Q16512-2|PKN1', 'ENSG00000160447|ENST00000291906|PKN3'] 22516 4762 ETGSFLWATY True H1975_Epitope_Rep2 1173.5342399905699 1173.5331499358601 23.406 2 -0.7642402167877889 0.23579015410833126 1.0 ['ENST00000564294.5_1_16:2256050-2256778:+|nuORF'] 41723 6357 IALIGSGW True NCI_RA007_Epitope_Rep2 815.45413919507 815.45304993586 29.333 2 -0.7642456194290057 0.23579015410833126 1.0 ['ENSG00000125734|ENST00000264080|GPR108'] 79410 20496 PATLLEGPL True PC9_epitope_Rep3 909.5171333744499 909.51602993586 84.097 2 -0.764251744975013 0.23579015410833126 1.0 ['ENST00000435712.1_1_10:131904549-131906742:+|nuORF'] 12145 10750 DIECRAAQLP True PC9_epitope_Rep3 1114.5440934816197 1114.54298993586 46.305 2 -0.7642548014338499 0.23579015410833126 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant', 'MUC5B|p.P1935Lfs*5|1|0.25|ENSG00000117983|chr11:1242680-1242680|C/-|frameshift_variant'] 100653 16189 SLDIQHVLDKL True H1975_Epitope_Rep3 1279.71360133487 1279.71250993586 67.726 2 -0.7642605238887675 0.23579015410833126 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 106592 8476 STPHNILKGT True PC9_epitope_Rep1 1066.5771078620598 1066.5760099358602 37.437 2 -0.7642890622467385 0.23579015410833126 1.0 ['ENST00000557403.5_1_14:23378802-23388343:-|nuORF', 'ENST00000557549.5_1_14:23381035-23388343:-|nuORF', 'ENST00000359890.7_2_14:23380580-23388391:-|nuORF', 'ENST00000557571.5_1_14:23386286-23388343:-|nuORF', 'ENST00000557464.5_1_14:23380609-23388343:-|nuORF', 'ENST00000555676.5_1_14:23380609-23388343:-|nuORF'] 101048 8377 SLGELGLVDLD True PC9_epitope_Rep1 1129.58666948625 1129.5855699358601 37.058 2 -0.7643257424953879 0.23581260742460078 1.0 ['ENST00000379619.5_1_2:28635552-28635666:+|nuORF'] 141727 2851 YTWRWVWSWEW True H1975_Epitope_Rep1 1683.7622828627896 1683.76063490379 14.585 3 -0.7643398979925634 0.23581260742460078 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 39252 10849 HIIIQWTKP True NCI_RA007_Epitope_Rep4 1134.65496425994 1134.65386993586 48.58 2 -0.7644433996722624 0.23585321424374192 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 48454 6308 KAAAKALK True PC9_epitope_Rep6 799.5279728416699 799.52686993586 32.801 2 -0.7644822977080605 0.23586180557595698 1.0 ['nc|ENSG00000185946|Q96LT9-2|RNPC3', 'ENSG00000185946|ENST00000423855|RNPC3'] 18191 9455 EILKELHHQK True NCI_RA007_Epitope_Rep1 1273.7142700412103 1273.7131699358602 40.772 2 -0.7644914017079703 0.23586180557595698 1.0 ['ENSG00000164299|ENST00000296739|SPZ1'] 95570 14107 RWSQPWRWRYW True H1975_Epitope_Rep1 1705.8378478448897 1705.83674993586 59.432 2 -0.7644957593043133 0.23586180557595698 1.0 ['ENST00000380009.8_1_5:94890875-94891094:+|nuORF'] 64912 10413 LQEEEPQRQR True NCI_RA007_Epitope_Rep1 1311.6531263366298 1311.6520299358601 44.488 2 -0.7645176662548242 0.23586180557595698 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 100087 17741 SISDASGLWP True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 73.523 2 -0.7645185354446868 0.23586180557595698 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6', 'nc|ENSG00000173826|Q9H252-2|KCNH6', 'ENSG00000173826|ENST00000314672|KCNH6'] 5614 4725 ANNVAYTTGKL True NCI_RA007_Epitope_Rep5 1150.59823722946 1150.5965849037902 24.858 3 -0.7645192679030216 0.23586180557595698 1.0 ['ENSG00000129151|ENST00000263182|BBOX1'] 49000 13372 KEFLHFLTDQF True PC9_epitope_Rep5 1423.7136013348697 1423.71250993586 56.451 2 -0.7645864702794561 0.23587302986236577 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 125907 10925 VLCDELGA True PC9_epitope_Rep6 818.3844049527398 818.38330993586 52.892 2 -0.7646558529689738 0.2359179237107648 1.0 ['PGM5|p.E381Kfs*67|1|0.31|ENSG00000154330|chr9:68465187-68465187|G/-|frameshift_variant', 'ENST00000510760.1_9:68765775-68778925:-|nuORF', 'ENST00000604870.6_1_9:70993123-71019929:+|nuORF', 'nc|ENSG00000154330|Q15124-2|PGM5', 'ENSG00000154330|ENST00000396396|PGM5'] 130682 11294 VSTPSQPL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 48.322 2 -0.7646605622301272 0.2359179237107648 1.0 ['ENSG00000162460|ENST00000375782|TMEM82'] 79989 6017 PEYGHGNG True PC9_epitope_Rep3 829.3354806143699 829.33438993586 28.198 2 -0.7647348974741334 0.2359179237107648 1.0 ['ENSG00000262152|ENST00000573315|GREP1'] 127559 8828 VNSELVNIY True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 38.963 2 -0.7647715163404004 0.2359179237107648 1.0 ['ENSG00000149577|ENST00000324225|SIDT2', 'nc|ENSG00000149577|Q8NBJ9-2|SIDT2', 'SIDT2|p.F53L|1|0.32|ENSG00000149577|chr11:117179422-117179422|C/A|missense_variant', 'SIDT2|p.V65Cfs*5|1|0.16|ENSG00000149577|chr11:117181425-117181425|G/-|frameshift_variant', 'ENST00000524842.5_3_11:117050096-117052585:+|nuORF'] 55869 20982 LAPTFLEAT True PC9_epitope_Rep4 961.5120479940099 961.51149496793 88.868 1 -0.7647945775657553 0.23592914634862816 1.0 ['ENST00000421182.5_1_2:216300616-216300775:-|nuORF'] 24830 12141 FAVHFMVL True PC9_epitope_Rep2 962.5047948689399 962.50368993586 52.011 2 -0.7648209903589659 0.23593690332814382 1.0 ['ENST00000452340.7_1_14:77746025-77787024:-|nuORF', 'ENSG00000009830|ENST00000261534|POMT2'] 76095 15470 NMPVCSRSI True PC9_epitope_Rep4 1005.47357139365 1005.47246993586 67.434 2 -0.7648544134293201 0.23593690332814382 1.0 ['ENST00000398571.6_2_2:61515929-61516001:-|nuORF'] 53171 7691 KQDADRPLSK True NCI_RA007_Epitope_Rep5 1156.6200353031998 1156.61892993586 36.286 2 -0.7648597873704458 0.2359411946129331 1.0 ['nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170', 'ENST00000502249.6_1_4:119401524-119435218:+|nuORF'] 58059 4657 LEILIFCILLY True NCI_RA007_Epitope_Rep1 1351.78253284183 1351.78087490379 22.199 3 -0.7648709745863225 0.2359411946129331 1.0 ['nc|ENSG00000104361|Q9H841-1|NIPAL2', 'ENSG00000104361|ENST00000430223|NIPAL2'] 76022 9428 NLYRCMPVP True PC9_epitope_Rep3 1091.52560696651 1091.5245099358601 41.2 2 -0.7648746279313745 0.2359411946129331 1.0 ['ENST00000450473.1_1_20:52556707-52556815:+|nuORF'] 24333 13601 EYVRALHEL True PC9_epitope_Rep6 1128.5927579262 1128.5916699358602 64.069 2 -0.7649188674027098 0.23597832312640438 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 33032 10489 GIIGVKGAKI True PC9_epitope_Rep5 954.6226015024998 954.62150993586 45.332 2 -0.7649271688038605 0.23597832312640438 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 10418 15408 CHDGDETI True PC9_epitope_Rep1 888.3283466286 888.32724993586 64.085 2 -0.7650488373098413 0.23601891558479704 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 69920 10622 LVKANQNLVP True NCI_RA007_Epitope_Rep2 1094.64479349906 1094.64368993586 45.916 2 -0.7650632932673147 0.23602320287833176 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4', 'FRMPD4|p.S1105Kfs*31|1|0.55|ENSG00000169933|chrX:12718133-12718134|-/A|frameshift_variant', 'FRMPD4|p.A947Qfs*130|1|0.11|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant'] 113047 8802 TLNLDKLTG True H1975_Epitope_Rep3 973.54441075145 973.54330993586 38.863 2 -0.7650856304133958 0.23602320287833176 1.0 ['BCHE|p.A275D|1|0.07|ENSG00000114200|chr3:165830210-165830210|G/T|missense_variant'] 137823 9701 YERAEWRENIR True NCI_RA007_Epitope_Rep2 1520.7484237037995 1520.74678490379 42.354 3 -0.7650861472905592 0.23602320287833176 1.0 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000487968.5_1_22:23626151-23631864:+|nuORF'] 119494 25804 VARSILGGG True PC9_epitope_Rep2 828.4817509252398 828.48120496793 104.99 1 -0.7652333091577587 0.23613375038547954 1.0 ['ENST00000372695.5_1_X:102470037-102470112:+|nuORF'] 36350 20614 GVERRRTRPR True PC9_epitope_Rep6 1281.74903284049 1281.7479299358602 92.022 2 -0.7652551924115992 0.23613375038547954 1.0 ['ENST00000308110.8_1_11:65628088-65628496:+|nuORF'] 8376 9212 ATLNKPEK True PC9_epitope_Rep5 899.5076313199099 899.50652993586 40.38 2 -0.7652972187402413 0.2361414998751817 1.0 ['BBX|p.A443T|1|0.3|ENSG00000114439|chr3:107773048-107773048|G/A|missense_variant'] 135453 948 WHWRNRLVH True NCI_RA007_Epitope_Rep1 1302.68464167878 1302.6829949037901 5.0135 3 -0.7653066080222227 0.2361414998751817 1.0 ['ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 14858 11979 DVYAYTQVGVP True NCI_RA007_Epitope_Rep1 1210.5870038394198 1210.5859099358602 50.583 2 -0.7653158622467867 0.23615271659324522 1.0 ['ENSG00000101577|ENST00000677752|LPIN2'] 27697 18611 FPLHLSRCL True PC9_epitope_Rep1 1084.58517044796 1084.58406993586 76.374 2 -0.7653297177649498 0.23616393298189453 1.0 ['SENP1|p.Y270Ifs*35|1|0.09|ENSG00000079387|chr12:48074457-48074458|-/A|frameshift_variant', 'nc|ENSG00000079387|Q9P0U3-2|SENP1', 'ENSG00000079387|ENST00000549518|SENP1'] 58729 7081 LERVFSPQEL True PC9_epitope_Rep6 1216.6451874218799 1216.6435349037902 36.273 3 -0.7653405276846397 0.23617514904114417 1.0 ['nc|ENSG00000113073|Q96Q91-4|SLC4A9', 'nc|ENSG00000113073|Q96Q91-2|SLC4A9', 'ENSG00000113073|ENST00000506757|SLC4A9', 'nc|ENSG00000113073|Q96Q91|SLC4A9'] 3814 5135 AGVEQPGHV True PC9_epitope_Rep3 892.4402800360798 892.43918993586 24.837 2 -0.7653656811979384 0.23618636477100863 1.0 ['ENST00000306688.7_1_17:79981719-79983267:+|nuORF', 'ENST00000583383.5_1_17:79981501-79983267:+|nuORF'] 128143 4497 VPLNWLRSRPY True PC9_epitope_Rep2 1399.77245362367 1399.7707949037901 22.655 3 -0.7654192425563855 0.2361975801715024 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 22577 6970 ETKVPEEIPP True H1975_Epitope_Rep1 1137.5917548666898 1137.59064993586 31.852 2 -0.7654602856210255 0.2362138830162086 1.0 ['nc|ENSG00000188152|Q5VZR2-2|NUTM2G', 'nc|ENSG00000188199|A6NNL0-2|NUTM2B', 'nc|ENSG00000184923|Q8IVF1-2|NUTM2A', 'ENSG00000188152|ENST00000372322|NUTM2G', 'ENSG00000130950|ENST00000253262|NUTM2F', 'ENSG00000214562|ENST00000381697|NUTM2D', 'ENSG00000228570|ENST00000429984|NUTM2E', 'ENSG00000188199|ENST00000429828|NUTM2B', 'ENSG00000184923|ENST00000381707|NUTM2A'] 49450 6178 KEYESYSDF True NCI_RA007_Epitope_Rep1 1166.4767846840998 1166.4756899358601 28.067 2 -0.7654955872587514 0.2362138830162086 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 43830 7059 IHSETQSL True PC9_epitope_Rep3 913.4505103666099 913.44940993586 32.162 2 -0.7655114656898349 0.2362138830162086 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1'] 48779 7445 KDLILPKISDP True NCI_RA007_Epitope_Rep4 1237.72818876985 1237.72654490379 35.28 3 -0.7655168558044121 0.2362138830162086 1.0 ['ENSG00000155252|ENST00000370631|PI4K2A'] 79891 10594 PENNVLSPLP True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 45.819 2 -0.7655328814793901 0.2362138830162086 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant', 'TP53|p.N131Kfs*39|1|0.6|ENSG00000141510|chr17:7675219-7675219|G/-|frameshift_variant', 'TP53|p.A69Gfs*80|1|0.56|ENSG00000141510|chr17:7676163-7676164|-/C|frameshift_variant', 'TP53|p.H115Vfs*28|1|0.26|ENSG00000141510|chr17:7676011-7676027|TGGCTGTCCCAGAATGC/-|frameshift_variant', 'TP53|p.F54Sfs*69|1|0.96|ENSG00000141510|chr17:7676208-7676208|A/-|frameshift_variant', 'TP53|p.S90Pfs*33|1|0.15|ENSG00000141510|chr17:7676102-7676102|G/-|frameshift_variant', 'TP53|p.V73Wfs*50|2|0.26|ENSG00000141510|chr17:7676152-7676152|C/-|frameshift_variant', 'TP53|p.D48Nfs*72|1|0.15|ENSG00000141510|chr17:7676218-7676227|CAATATCGTC/-|frameshift_variant'] 11440 6395 DEYEAHQERVL True NCI_RA007_Epitope_Rep1 1387.6368075661499 1387.6351649037902 28.9 3 -0.7655470840654193 0.2362138830162086 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF', 'ENSG00000121481|ENST00000367510|RNF2'] 129954 25478 VRVGALLL True PC9_epitope_Rep5 839.5592729699499 839.5587249679301 103.25 1 -0.7655512061503396 0.2362138830162086 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 76867 6172 NRDLATPVM-[Oxidation] True PC9_epitope_Rep2 1031.50698007735 1031.50588993586 29.132 2 -0.7655544694058255 0.2362138830162086 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 31297 21808 GDIVMTQSPL True PC9_epitope_Rep4 1059.52704643515 1059.5259499358601 92.081 2 -0.765621543772904 0.23624405426037937 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 64385 14371 LPLPPPQLSI True NCI_RA007_Epitope_Rep5 1073.6484818971699 1073.64738993586 61.963 2 -0.7656397200490649 0.23624405426037937 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 109876 4994 TEEVLDHMGTF True H1975_Epitope_Rep2 1277.5598031154097 1277.55814490379 24.294 3 -0.7656565285605268 0.23624405426037937 1.0 ['ENSG00000115942|ENST00000234296|ORC2'] 58889 11035 LETAMHVKEK True PC9_epitope_Rep2 1184.62234380232 1184.62124993586 47.765 2 -0.7656742360792353 0.23624405426037937 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 37068 2903 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 14.772 3 -0.7657004373173185 0.23626994729656325 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 3116 9203 AGAKVNDVVP True H1975_Epitope_Rep3 968.5290950404799 968.52798993586 40.391 2 -0.765775338244712 0.23629583957250652 1.0 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 64866 9376 LQDSFEYINQ True H1975_Epitope_Rep2 1255.57208205127 1255.57098993586 41.027 2 -0.7657931215908486 0.23630358191426895 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'ENST00000504704.6_1_4:159690364-159754995:+|nuORF'] 58335 13194 LEMSSEAKATS True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 57.43 3 -0.7658017206453491 0.23630358191426895 1.0 ['ENSG00000084090|ENST00000337288|STARD7'] 129953 25606 VRVGALLL True PC9_epitope_Rep3 839.5592729699499 839.5587249679301 103.99 1 -0.7658777411475617 0.23632947255618678 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 37069 2970 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 15.112 3 -0.7659434672242859 0.23633721356957269 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 24999 188 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 1.0203 2 -0.765962170419512 0.23633721356957269 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 66621 8713 LSKEIWLPP True H1975_Epitope_Rep3 1081.6171817688898 1081.6160899358601 38.516 2 -0.7660078695111288 0.2363484234630967 1.0 ['ENSG00000213965|ENST00000397061|NUDT19'] 78732 6230 PAAARPLPAA True PC9_epitope_Rep4 933.5396001545298 933.53850993586 31.01 2 -0.7660380240835728 0.23635963302752294 1.0 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 116676 14516 TVAVTVMPQWR True NCI_RA007_Epitope_Rep1 1286.68052738478 1286.67942993586 60.51 2 -0.7660541993025141 0.23638552094648152 1.0 ['ENSG00000156284|ENST00000399899|CLDN8'] 33482 17798 GLATVDIQNP True PC9_epitope_Rep2 1026.5345743437397 1026.53346993586 73.752 2 -0.7660795005033438 0.2363932597463598 1.0 ['ENSG00000015285|ENST00000376701|WAS'] 13318 17231 DLTVAHLEV True PC9_epitope_Rep3 995.52876068731 995.52766993586 71.431 2 -0.7660852898784841 0.2363932597463598 1.0 ['ENSG00000171060|ENST00000304519|C8orf74'] 129950 24889 VRVGALLL True NCI_RA007_Epitope_Rep5 839.5592729699499 839.5587249679301 103.23 1 -0.7661679537173854 0.23643382406904548 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 32694 16396 GGTDFPAAQT True PC9_epitope_Rep1 963.4297749220299 963.42922496793 67.89 1 -0.766195510072752 0.236468239990607 1.0 ['nc|ENSG00000144749|Q96JA1-2|LRIG1'] 94754 9401 RSKFLQSDTYK True H1975_Epitope_Rep3 1371.7146639640298 1371.71356993586 41.162 2 -0.7662113897568901 0.236468239990607 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2', 'ENST00000460924.6_1_11:112046255-112064455:+|nuORF', 'ENSG00000197580|ENST00000357685|BCO2', 'ENST00000525987.5_1_11:111959732-112064455:+|nuORF', 'nc|ENSG00000197580|Q9BYV7-6|BCO2', 'nc|ENSG00000197580|Q9BYV7-4|BCO2', 'nc|ENSG00000197580|Q9BYV7-2|BCO2'] 47472 19043 IVPDLDLQQV True PC9_epitope_Rep6 1138.62338934814 1138.6222899358602 85.893 2 -0.7662276743156031 0.236468239990607 1.0 ['ENSG00000159256|ENST00000400485|MORC3'] 10232 25650 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 106.76 1 -0.7662571726959353 0.236468239990607 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 107127 11238 SVICLFIPSP True PC9_epitope_Rep6 1074.5783537320199 1074.5772499358602 54.223 2 -0.7662702269607959 0.236468239990607 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|2.1672232902095696|0.3234029913481031|2.74|541.0|50|3|anti-sense'] 57295 5549 LEAAGDKF True NCI_RA007_Epitope_Rep4 849.42323298961 849.42212993586 27.942 2 -0.7662762080111774 0.236468239990607 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 129632 19504 VRPGHGKG True PC9_epitope_Rep6 806.4511195033 806.45002993586 87.683 2 -0.766289656444587 0.236468239990607 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 129945 25249 VRVGALLL True H1975_Epitope_Rep2 839.5592729699499 839.5587249679301 103.72 1 -0.766372026678807 0.23647944582238725 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 14298 11370 DSVLSLVHVK True NCI_RA007_Epitope_Rep2 1095.62880908175 1095.6277099358601 48.814 2 -0.7664776423700889 0.2365493557192756 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3'] 100421 16136 SLADVILLQT True PC9_epitope_Rep2 1071.6175756917098 1071.61646993586 67.325 2 -0.7664982908531159 0.23655708834751982 1.0 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 98509 18112 SFLLWWLL True PC9_epitope_Rep2 1076.6058888092 1076.60478993586 74.97 2 -0.7665261442381215 0.23655708834751982 1.0 ['nc|ENSG00000150967|Q9NP78-3|ABCB9', 'ENST00000538895.5_1_12:123424612-123444782:-|nuORF', 'nc|ENSG00000150967|Q9NP78-6|ABCB9', 'nc|ENSG00000150967|Q9NP78-5|ABCB9', 'nc|ENSG00000150967|Q9NP78-7|ABCB9', 'nc|ENSG00000150967|Q9NP78-2|ABCB9', 'ENSG00000150967|ENST00000280560|ABCB9', 'ABCB9|p.V140M|1|0.17|ENSG00000150967|chr12:122959818-122959818|C/T|missense_variant'] 91797 8230 RKHTLFSGQP True PC9_epitope_Rep3 1169.63054041725 1169.62888490379 36.635 3 -0.7666121015008478 0.23659764312234924 1.0 ['ZAN|p.E2695Rfs*83|1|0.75|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant', 'ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.A2019Pfs*35|1|0.1|ENSG00000146839|chr7:100775692-100775692|C/-|frameshift_variant', 'ZAN|p.Q2488Rfs*12|1|0.3|ENSG00000146839|chr7:100791044-100791044|C/-|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 48535 19447 KALEELACKLC True PC9_epitope_Rep4 1219.6304659578698 1219.62936993586 82.917 2 -0.7666918298026365 0.23666754718088698 1.0 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1'] 137492 7846 YEEFWIKYAKY True NCI_RA007_Epitope_Rep1 1538.74456710998 1538.7429149037903 34.51 3 -0.7667970760931287 0.23671930030523597 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 28577 23224 FSFRKLWAF True PC9_epitope_Rep5 1200.64439957624 1200.64330993586 94.314 2 -0.7668294543628711 0.23671930030523597 1.0 ['nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 110258 8271 TERLERTGP True H1975_Epitope_Rep3 1057.55162139021 1057.5505299358601 36.796 2 -0.7668429823013864 0.23674517572822656 1.0 ['ENSG00000232258|ENST00000620492|TMEM114'] 3168 7183 AGDTMGHLSAP True PC9_epitope_Rep4 1055.47059418819 1055.46948993586 34.931 2 -0.7668629027633936 0.23677105039180582 1.0 ['ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 81374 12686 PLDLIRKYY True H1975_Epitope_Rep1 1179.66519459047 1179.6640899358601 53.853 2 -0.7669060644669478 0.23679692429600716 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 122774 5585 VGGPADAKGP True PC9_epitope_Rep1 867.4450310633499 867.44392993586 26.311 2 -0.7669359430466465 0.23683747138580735 1.0 ['ENSG00000282936|ENST00000634965|unknown'] 80195 10649 PFWAWRSWCWR True PC9_epitope_Rep3 1579.7295432658698 1579.72789490379 45.908 3 -0.7669901764263576 0.23684171912371058 1.0 ['ENST00000394697.6_1_16:50322145-50324440:+|nuORF'] 118835 10919 VAANQKGI True PC9_epitope_Rep6 799.4552018242299 799.45410993586 52.866 2 -0.7670172345820028 0.23684171912371058 1.0 ['ENSG00000178814|ENST00000618853|OPLAH', 'ENST00000527993.1_1_8:145108066-145109551:-|nuORF'] 39080 10193 HHTEMEFYFFY True H1975_Epitope_Rep3 1549.6336367620097 1549.63252993586 44.252 2 -0.7670337156951381 0.23684171912371058 1.0 ['FRAS1|p.S3503Y|1|0.29|ENSG00000138759|chr4:78519449-78519449|C/A|missense_variant'] 122058 19289 VFYNYQPI True PC9_epitope_Rep3 1042.51238234718 1042.51128993586 79.416 2 -0.7670769833424276 0.23685021347770588 1.0 ['ANO1|p.K313N|1|0.21|ENSG00000131620|chr11:70124391-70124391|G/C|missense_variant'] 1640 7877 AEFSLHCETNL True PC9_epitope_Rep2 1262.5601374685798 1262.55904993586 35.666 2 -0.7671209975611342 0.23685021347770588 1.0 ['ENSG00000139318|ENST00000279488|DUSP6'] 29991 7466 FWWVERNFYFY True H1975_Epitope_Rep1 1655.75613485319 1655.75449490379 33.717 3 -0.7671336087274967 0.23685021347770588 1.0 ['ENST00000295924.11_2_3:156423406-156423454:+|nuORF'] 126725 25652 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 106.17 3 -0.7671392788683469 0.23685021347770588 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 24732 23686 FAPLWWPRR True NCI_RA007_Epitope_Rep3 1227.66653200315 1227.66487490379 102.7 3 -0.7672042098263185 0.23685021347770588 1.0 ['ENST00000233535.8_1_2:27481772-27486087:-|nuORF'] 99037 12322 SHENLLINELI True PC9_epitope_Rep4 1293.69286589029 1293.69176993586 55.206 2 -0.7672195058042621 0.23685021347770588 1.0 ['ENSG00000133393|ENST00000255759|CEP20', 'nc|ENSG00000133393|Q96NB1-2|CEP20'] 3620 8312 AGPEVAAQL True PC9_epitope_Rep5 854.4497820906199 854.44868993586 36.91 2 -0.7672609820684093 0.23686141025264826 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9', 'nc|ENSG00000185453|Q86XI8|ZSWIM9'] 94444 20674 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 85.629 2 -0.767339771645315 0.23690194985255064 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 69164 11879 LTRVLFKYFER True NCI_RA007_Epitope_Rep1 1470.83471952706 1470.83362993586 50.189 2 -0.7673927139882925 0.23692781690140846 1.0 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF'] 94464 23497 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 96.861 2 -0.767475433254665 0.23695792500440116 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 108994 9347 TAGRMCTEGP True H1975_Epitope_Rep1 1021.4321005044899 1021.43100993586 40.861 2 -0.7674854764479999 0.23695792500440116 1.0 ['ENST00000556980.5_1_14:104177876-104180491:-|nuORF'] 131947 11308 VTRWMLFFRTR True H1975_Epitope_Rep3 1511.8183582702698 1511.8172699358602 48.602 2 -0.7674966776086257 0.23695792500440116 1.0 ['F2RL2|p.L116R|1|0.25|ENSG00000164220|chr5:76618360-76618360|A/C|missense_variant'] 62898 8545 LLNNHHLS True NCI_RA007_Epitope_Rep5 946.4984636185402 946.49736993586 39.551 2 -0.767516224348446 0.23695792500440116 1.0 ['ENST00000330927.4_1_17:29632143-29632203:-|nuORF'] 14310 18433 DSYRDRYNRRR True PC9_epitope_Rep6 1555.7716187598696 1555.7705299358602 83.546 2 -0.7675416187524435 0.236976836299089 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26'] 58291 8287 LELVRQAP True H1975_Epitope_Rep3 924.5392658013599 924.53816993586 36.86 2 -0.767545319850839 0.236976836299089 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'RPS6KA4|p.R652Efs*4|1|0.11|ENSG00000162302|chr11:64370380-64370380|C/-|frameshift_variant', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 42451 10969 IEDYDVIAS True PC9_epitope_Rep5 1023.4760564081099 1023.4749499358601 47.181 2 -0.7675615313806736 0.236976836299089 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 132282 13652 VTWDKYNI True PC9_epitope_Rep3 1037.5181960036098 1037.5170899358602 57.577 2 -0.7675696939562714 0.23698802957399367 1.0 ['RCN2|p.E121K|1|0.33|ENSG00000117906|chr15:76935636-76935636|G/A|missense_variant'] 136134 10890 WRQWNRIFRWK True NCI_RA007_Epitope_Rep1 1674.90078245462 1674.89914490379 46.351 3 -0.7676455891275074 0.2369992225205005 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 67642 8312 LSVQVFIDK True NCI_RA007_Epitope_Rep2 1047.59644632431 1047.5953499358602 36.971 2 -0.7676709949246112 0.23701041513862403 1.0 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF'] 27534 10528 FNDGNAAVV True PC9_epitope_Rep2 905.4242956187699 905.42374496793 45.818 1 -0.7677163657250534 0.23702160742837863 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 130590 4204 VSSEQVLK True NCI_RA007_Epitope_Rep5 888.4916469025999 888.49054993586 22.702 2 -0.7678011312938436 0.23704746816874964 1.0 ['ENSG00000104267|ENST00000285379|CA2'] 60285 8227 LGSALDPLADK True NCI_RA007_Epitope_Rep2 1098.5920892198599 1098.59098993586 36.638 2 -0.7678222422717339 0.23705865958663988 1.0 ['ENST00000609154.1_1_20:5988006-5996237:+|nuORF', 'ENST00000489345.5_1_20:5990447-6004030:+|nuORF', 'nc|ENSG00000088766|Q9UJA2-2|CRLS1', 'ENSG00000088766|ENST00000378863|CRLS1'] 105480 410 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 2.3648 3 -0.7678476695775388 0.23706985067621086 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 73514 11967 MVKEYMIQF True PC9_epitope_Rep4 1187.5718884525897 1187.5702349037902 53.824 3 -0.7679110492483723 0.23708527677549943 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 16798 10605 EEVLINKK True H1975_Epitope_Rep1 971.56514619603 971.56404993586 45.746 2 -0.7679218152640602 0.23708527677549943 1.0 ['ENST00000504733.1_1_3:130546621-130547209:+|nuORF'] 120255 17698 VECSEQKAPP True PC9_epitope_Rep1 1086.5015599632998 1086.50046993586 72.87 2 -0.7679231921876827 0.23708527677549943 1.0 ['ENSG00000177238|ENST00000322122|TRIM72'] 80871 18680 PHTGQLVSTW True PC9_epitope_Rep6 1124.56145779792 1124.56036993586 84.496 2 -0.7679683431783048 0.23708527677549943 1.0 ['ENST00000435881.6_1_17:40723685-40723811:+|nuORF'] 19678 17977 ELRGYPCSL True PC9_epitope_Rep1 1036.5011660404798 1036.5000699358602 73.941 2 -0.767994173504698 0.23709646665395503 1.0 ['ENSG00000165661|ENST00000358701|QSOX2'] 78792 6302 PAAPRQVPV True PC9_epitope_Rep3 933.5396001545298 933.53850993586 29.272 2 -0.7680431474745202 0.23710417858347632 1.0 ['ENST00000478344.6_1_9:140240296-140248823:-|nuORF', 'nc|ENSG00000187609|Q8N9H8-2|EXD3', 'ENST00000487745.5_1_9:140201404-140247406:-|nuORF', 'ENSG00000187609|ENST00000340951|EXD3'] 100780 9652 SLEEKDHI True H1975_Epitope_Rep3 969.4767251144499 969.47562993586 42.143 2 -0.7680501112105597 0.23710417858347632 1.0 ['nc|ENSG00000091831|P03372-3|ESR1', 'nc|ENSG00000091831|P03372-2|ESR1', 'ENSG00000091831|ENST00000206249|ESR1'] 27505 6614 FMMRWPTSRPW True PC9_epitope_Rep3 1493.7060309399697 1493.70439490379 30.466 3 -0.7681363150440788 0.23713774492549572 1.0 ['ENST00000329138.8_1_17:79654057-79654111:+|nuORF'] 12349 7351 DIRMIISGTT True NCI_RA007_Epitope_Rep1 1105.58014463717 1105.5790499358602 32.587 2 -0.7681719111496625 0.23713774492549572 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000513084.5_1_5:96245508-96253306:+|nuORF'] 64719 14315 LPWARELESRE True PC9_epitope_Rep5 1384.70991293676 1384.70880993586 60.065 2 -0.7681913324942311 0.23713774492549572 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 86318 20463 QITTVVLPTL True PC9_epitope_Rep3 1083.6539612004299 1083.65286993586 83.968 2 -0.7683031053468787 0.23721878391458656 1.0 ['ENSG00000166002|ENST00000298966|SMCO4'] 113405 12883 TLSDTLWGP True H1975_Epitope_Rep1 988.48656152216 988.48546993586 54.625 2 -0.7683122763995233 0.23721878391458656 1.0 ['ENSG00000107159|ENST00000378357|CA9'] 122768 5761 VGGNEGIVIT True NCI_RA007_Epitope_Rep5 957.51311062317 957.51200993586 28.846 2 -0.7683595919769552 0.23724115680178332 1.0 ['nc|ENSG00000120519|Q0GE19-3|SLC10A7'] 117056 5364 TVIECIKSP True NCI_RA007_Epitope_Rep2 988.5263181591599 988.52522993586 25.483 2 -0.7683684191692082 0.23724115680178332 1.0 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS', 'nc|ENSG00000188158|Q6T4R5-4|NHS', 'nc|ENSG00000188158|Q6T4R5-3|NHS'] 97556 13439 SEESHEQF True H1975_Epitope_Rep2 991.38830403287 991.38720993586 56.827 2 -0.7683845939087469 0.23724886346971696 1.0 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS', 'ENST00000571885.1_1_17:79662737-79663393:+|nuORF'] 79708 10553 PDTGQKKTL True PC9_epitope_Rep1 986.53965972418 986.53856993586 45.482 2 -0.7684048404761767 0.23724886346971696 1.0 ['nc|ENSG00000164830|Q8N573-2|OXR1'] 95395 9256 RWELYDRSRDP True NCI_RA007_Epitope_Rep2 1491.7218746027897 1491.72076993586 40.612 2 -0.7684581097370462 0.23725309049315912 1.0 ['ENSG00000181523|ENST00000326317|SGSH'] 71826 14324 MEKPPYFPP True H1975_Epitope_Rep2 1104.5314035396 1104.53030993586 60.247 2 -0.7684700179788269 0.23725309049315912 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1'] 57408 9205 LEARLLPSP True H1975_Epitope_Rep2 994.58113061334 994.58002993586 40.36 2 -0.7685012210044274 0.23725309049315912 1.0 ['ENSG00000212916|ENST00000418460|MAP10'] 132860 15967 VVLLRARPVI True PC9_epitope_Rep6 1134.76009803482 1134.7584449037902 73.716 3 -0.7685579914550861 0.23727893949614334 1.0 ['ITGA9-SEC13|1|fusion', 'ENSG00000144668|ENST00000264741|ITGA9'] 70157 10916 LVPQKALD True PC9_epitope_Rep1 882.5174677276199 882.51636993586 46.874 2 -0.768588703466245 0.23730478774103672 1.0 ['ENST00000593099.5_1_17:33325156-33325826:+|nuORF'] 25226 2983 FDFMDAPP True NCI_RA007_Epitope_Rep2 938.3844049527398 938.38330993586 16.15 2 -0.7686381215150531 0.2373306352278726 1.0 ['ENSG00000067596|ENST00000262415|DHX8'] 122878 5863 VGHLRVRRFWS True PC9_epitope_Rep1 1411.79492040375 1411.79326490379 27.368 3 -0.768663927361476 0.23734181855506842 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 16835 7385 EEYQHERLK True NCI_RA007_Epitope_Rep2 1230.59929985862 1230.59820993586 33.35 2 -0.7687179049333057 0.23734952125397732 1.0 ['PPARGC1A|p.E648D|1|0.08|ENSG00000109819|chr4:23812822-23812822|T/G|missense_variant', 'ENST00000509702.5_1_4:23766811-23826805:-|nuORF', 'nc|ENSG00000109819|Q9UBK2-9|PPARGC1A', 'PPARGC1A|p.E747*|1|0.37|ENSG00000109819|chr4:23801784-23801785|-/A|frameshift_variant', 'PPARGC1A|p.R723Vfs*42|1|0.07|ENSG00000109819|chr4:23801856-23801856|G/-|frameshift_variant', 'nc|ENSG00000109819|Q9UBK2-4|PPARGC1A', 'ENSG00000109819|ENST00000264867|PPARGC1A', 'nc|ENSG00000109819|Q9UBK2-3|PPARGC1A'] 27715 12886 FPPQQENID True H1975_Epitope_Rep1 1086.4981888350198 1086.49708993586 54.638 2 -0.7687254873763147 0.23734952125397732 1.0 ['ENST00000485790.1_1_21:33073145-33104086:-|nuORF'] 44068 14693 IILKRKRGRPP True PC9_epitope_Rep2 1332.8830071321597 1332.88135490379 61.782 3 -0.7687616892446859 0.2374305362091465 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 25763 8963 FETFYQRFRHF True PC9_epitope_Rep3 1576.75753183552 1576.75588490379 39.424 3 -0.7687636512411953 0.2374305362091465 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 110904 11532 TGVLLQKI True H1975_Epitope_Rep2 870.5538532363399 870.55274993586 49.417 2 -0.7688318900466823 0.23745637957831148 1.0 ['ENSG00000156414|ENST00000409874|TDRD9', 'nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'TDRD9|p.G614Pfs*10|1|0.09|ENSG00000156414|chr14:104006514-104006515|-/CCCCTTAA|frameshift_variant'] 11586 5313 DGEEQQPPHEA True H1975_Epitope_Rep3 1235.50545904343 1235.50436993586 25.512 2 -0.7688931065864614 0.23745711520980559 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 64610 13956 LPSRYLHRAEK True H1975_Epitope_Rep1 1368.76261721596 1368.7615299358602 58.837 2 -0.7688967837702405 0.23745711520980559 1.0 ['TLR4|p.L470Sfs*43|1|0.1|ENSG00000136869|chr9:117713534-117713547|GCTTGTCCAGTCTC/-|frameshift_variant'] 129767 14987 VRRFRKRPE True NCI_RA007_Epitope_Rep5 1242.7421565549 1242.74050490379 64.316 3 -0.7689110293001293 0.23745711520980559 1.0 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR'] 43341 10716 IFYYYRSHEDK True NCI_RA007_Epitope_Rep2 1519.7095785835897 1519.7084899358601 46.281 2 -0.7689336563158552 0.23745711520980559 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1', 'nc|ENSG00000054690|Q9ULM0-2|PLEKHH1', 'ENST00000558981.5_1_14:68038444-68042282:+|nuORF'] 33892 9801 GLPTSIAH True PC9_epitope_Rep5 794.42865272322 794.42754993586 42.668 2 -0.7689598239968997 0.23746829504303077 1.0 ['ENST00000526600.1_1_11:12963940-12964069:+|nuORF'] 387 12922 AALCRRKLKRA True H1975_Epitope_Rep3 1284.7924778755998 1284.79084490379 54.932 3 -0.7690162524326466 0.23748717196891952 1.0 ['nc|ENSG00000169635|Q96JB3-2|HIC2', 'ENSG00000169635|ENST00000407464|HIC2'] 84592 16621 QCSMNMNWLSL True PC9_epitope_Rep4 1325.55664939461 1325.55499490379 71.902 3 -0.7690369529557393 0.23748717196891952 1.0 ['ENSG00000113369|ENST00000265138|ARRDC3'] 102124 10154 SLRNRNVK True PC9_epitope_Rep5 985.57811092157 985.57700993586 44.044 2 -0.7690394801522138 0.23748717196891952 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE', 'PIKFYVE|p.G1954V|1|0.4|ENSG00000115020|chr2:208353914-208353914|G/T|missense_variant'] 142800 1695 YYRWLNYGGV True NCI_RA007_Epitope_Rep3 1289.6193070272097 1289.61766490379 9.622 3 -0.7690671472180303 0.23749486893801677 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF', 'ENST00000546761.5_1_12:57139854-57146049:-|nuORF'] 82703 12727 PQVLEATA True PC9_epitope_Rep3 827.4388830537499 827.43778993586 53.975 2 -0.7690709016280064 0.23749486893801677 1.0 ['nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2', 'ENST00000558383.1_1_15:45393877-45400429:-|nuORF'] 61776 5587 LLALHSAA True PC9_epitope_Rep4 794.4650382319401 794.46394993586 28.272 2 -0.7692704251016983 0.23752070719657542 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 128171 21593 VPLRRGQHL True PC9_epitope_Rep6 1074.6410455313 1074.6399499358602 95.934 2 -0.7693385983681396 0.23752840284394927 1.0 ['STK11|p.L228Rfs*33|1|0.74|ENSG00000118046|chr19:1220664-1220677|CCTGGACACCTTCT/-|frameshift_variant', 'STK11|p.T212Qfs*53|1|0.46|ENSG00000118046|chr19:1220616-1220617|GA/-|frameshift_variant', 'STK11|p.Q220Pfs*46|1|0.95|ENSG00000118046|chr19:1220636-1220637|-/T|frameshift_variant'] 101138 10158 SLGQSEEKPV True PC9_epitope_Rep2 1072.540053647 1072.53894993586 44.41 2 -0.7693662520050149 0.23752840284394927 1.0 ['nc|ENSG00000189159|Q9UK76-3|JPT1', 'ENSG00000189159|ENST00000409753|JPT1'] 19904 2773 ELTSAGLPAP True H1975_Epitope_Rep2 954.5022115863 954.50110993586 14.696 2 -0.7694279329437815 0.2375472749127796 1.0 ['ENST00000416675.5_1_7:100450451-100456466:+|nuORF'] 65073 10527 LQLFLEQP True PC9_epitope_Rep5 986.54368247546 986.54258993586 45.48 2 -0.7694438858764711 0.2375472749127796 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7', 'ENST00000467576.1_1_6:31743192-31744939:-|nuORF'] 131528 5632 VTKSSLIWSY True NCI_RA007_Epitope_Rep4 1182.62847472858 1182.62683490379 28.265 3 -0.7694457832013547 0.2375472749127796 1.0 ['ENSG00000144015|ENST00000272395|TRIM43', 'ENSG00000144010|ENST00000639673|TRIM43B'] 48774 14605 KDLEIEQWHKK True H1975_Epitope_Rep3 1452.77251319332 1452.7714099358602 61.547 2 -0.7695012354550251 0.23755845145780502 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 88434 13691 QSPVLILGG True H1975_Epitope_Rep1 882.5174677276199 882.51636993586 57.798 2 -0.769562487644894 0.2375842861330988 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'CATSPERG|p.E408Vfs*5|1|0.3|ENSG00000099338|chr19:38356769-38356770|AA/-|frameshift_variant', 'ENST00000467739.1_1_19:38837137-38839675:+|nuORF'] 60384 23203 LGTLLGNLL True PC9_epitope_Rep3 912.56441792004 912.56332993586 94.523 2 -0.7696209967154551 0.23758849654808495 1.0 ['OR4C16|p.L85*|1|0.36|ENSG00000279514|chr11:55572378-55572378|T/-|frameshift_variant', 'OR4C16|p.K86Rfs*11|1|0.21|ENSG00000279514|chr11:55572383-55572383|A/-|frameshift_variant', 'OR4C16|p.T116Rfs*16|1|0.15|ENSG00000279514|chr11:55572474-55572474|C/-|frameshift_variant', 'ENSG00000279514|ENST00000623907|OR4C16'] 57108 16892 LDSTCSST True NCI_RA007_Epitope_Rep5 812.3221986190001 812.32110993586 71.732 2 -0.7696257923253893 0.23758849654808495 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 112595 10646 TLERLAPRF True PC9_epitope_Rep2 1101.6294777880898 1101.62838993586 46.263 2 -0.7696557474106117 0.23758849654808495 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 72091 8959 MFCSYDFWNP True PC9_epitope_Rep1 1308.4943664078796 1308.49326993586 39.305 2 -0.7696817540197978 0.23759967166979362 1.0 ['ENST00000264963.8_2_2:97371867-97372074:-|nuORF'] 73625 8842 MWNWMVSL True PC9_epitope_Rep2 1065.47759414493 1065.4764899358602 39.364 2 -0.7697401541925478 0.23760736376161581 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 63930 13710 LNRQHSQRIR True H1975_Epitope_Rep3 1306.73304842318 1306.73194993586 58.032 2 -0.7697405387311776 0.23760736376161581 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 39298 10722 HIPRRKPF True PC9_epitope_Rep6 1049.62466719117 1049.6235699358601 52.055 2 -0.7698346192795191 0.2376443688808114 1.0 ['ENST00000301332.2_1_8:145692465-145692931:+|nuORF'] 112465 8543 TLDHVIATHQS True PC9_epitope_Rep3 1220.6149499227602 1220.61331490379 37.816 3 -0.7698392157540835 0.2376443688808114 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555226.1_1_14:81862181-81864726:-|nuORF'] 94467 24338 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 100.14 2 -0.7698965352836333 0.2376667155210318 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 81901 8825 PLSAHALS True H1975_Epitope_Rep2 794.42865272322 794.42754993586 38.912 2 -0.7699147707115715 0.2376667155210318 1.0 ['ENSG00000073910|ENST00000542859|FRY', 'FRY|p.G2656Efs*66|1|0.1|ENSG00000073910|chr13:32267187-32267187|G/-|frameshift_variant'] 70392 18981 LVTGGYDYDV True PC9_epitope_Rep3 1100.50260550912 1100.5015099358602 78.234 2 -0.7699583414343 0.2376925444446073 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 25018 10875 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 46.291 2 -0.7699714733265886 0.23770371673115254 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 65247 11665 LQSSVLAL True PC9_epitope_Rep1 829.49091862661 829.48982993586 49.746 2 -0.770045802741472 0.2377407157721957 1.0 ['ENST00000423853.5_1_19:54876070-54876483:-|nuORF', 'ENST00000436513.5_1_19:54872785-54876477:-|nuORF'] 29545 9801 FVHYFAPDSL True PC9_epitope_Rep5 1194.5709598524597 1194.5693249037902 42.668 3 -0.7700701157713942 0.2377407157721957 1.0 ['CON__Q3T052'] 80399 12881 PGIEKVDDVVK True PC9_epitope_Rep4 1197.6605031328497 1197.6594099358601 57.422 2 -0.7701573309359107 0.23777771264435196 1.0 ['ENSG00000116898|ENST00000373116|MRPS15'] 109484 8221 TDLNRDVTL True PC9_epitope_Rep6 1045.54038800017 1045.53928993586 41.201 2 -0.7701833327912558 0.23777771264435196 1.0 ['nc|ENSG00000073712|Q96AC1-2|FERMT2', 'ENSG00000073712|ENST00000341590|FERMT2', 'nc|ENSG00000073712|Q96AC1-3|FERMT2'] 7791 10320 ASSWLHWPP True H1975_Epitope_Rep1 1079.5188647099499 1079.51776993586 44.643 2 -0.7701999949740952 0.23778539816524516 1.0 ['ENST00000487137.6_1_14:23516386-23516554:-|nuORF'] 19852 6733 ELTAARFGLDV True H1975_Epitope_Rep3 1190.62953735774 1190.62844993586 30.853 2 -0.7702124596233851 0.23778539816524516 1.0 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF', 'ENST00000504334.5_1_17:48627490-48633020:+|nuORF', 'ENST00000504271.1_1_17:48628191-48629053:+|nuORF', 'ENST00000504265.5_1_17:48627490-48628667:+|nuORF'] 126024 11863 VLDTKNYKQ True H1975_Epitope_Rep1 1107.59242357303 1107.5913299358601 50.63 2 -0.7702704208502217 0.2377930832356389 1.0 ['ENSG00000119878|ENST00000238892|CRIPT', 'ENST00000486447.1_1_2:46844062-46851363:+|nuORF'] 126241 13887 VLGRQEAEDP True H1975_Epitope_Rep2 1112.5462016565998 1112.5451099358602 58.561 2 -0.7703015395954906 0.2377930832356389 1.0 ['ENST00000237536.8_2_20:35406325-35406529:-|nuORF'] 43739 5804 IHFYPTFRYFK True NCI_RA007_Epitope_Rep1 1517.78195567821 1517.78032490379 26.629 3 -0.7703770713542822 0.23783775863079537 1.0 ['ENSG00000165661|ENST00000358701|QSOX2'] 92899 15430 RPFVSNWLF True PC9_epitope_Rep4 1164.60801406752 1164.60637490379 67.285 3 -0.7704111113628258 0.23783775863079537 1.0 ['SP7|p.C326S|1|0.35|ENSG00000170374|chr12:53328465-53328465|C/G|missense_variant'] 46113 22142 ISIFQTWYHLL True PC9_epitope_Rep5 1419.7550722240298 1419.7539699358601 90.206 2 -0.7704207304623952 0.23783775863079537 1.0 ['ENST00000578237.5_1_17:15555163-15586188:-|nuORF'] 83638 19320 PVDTRERGLK True PC9_epitope_Rep4 1169.6516697846498 1169.6500349037901 82.421 3 -0.7704236096107303 0.23783775863079537 1.0 ['ENSG00000274588|ENST00000611977|DGKK', 'DGKK|p.R206Efs*9|1|0.4|ENSG00000274588|chrX:50470064-50470064|G/-|frameshift_variant'] 5868 12199 APGALQPL True PC9_epitope_Rep6 765.43848913093 765.4379449679301 58.29 1 -0.7704453212270128 0.2378454414910764 1.0 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8'] 4937 14485 ALGDGVVAAL True PC9_epitope_Rep6 884.4967322830399 884.49562993586 67.6 2 -0.7704729543797991 0.2378454414910764 1.0 ['NLRP5|p.G1081V|1|0.48|ENSG00000171487|chr19:56053751-56053751|G/T|missense_variant'] 76229 6694 NPAGLAATAM True PC9_epitope_Rep4 915.44840219163 915.44730993586 32.932 2 -0.7705546617565509 0.23785660908171788 1.0 ['ENSG00000164244|ENST00000296666|PRRC1', 'nc|ENSG00000164244|Q96M27-3|PRRC1', 'nc|ENSG00000164244|Q96M27-2|PRRC1', 'nc|ENSG00000164244|Q96M27-4|PRRC1', 'nc|ENSG00000164244|Q96M27-5|PRRC1', 'ENST00000512871.1_1_5:126859171-126859306:+|nuORF'] 125173 8081 VIHGNVFLK True H1975_Epitope_Rep3 1025.6022004110898 1025.6011099358602 36.057 2 -0.7705824984097093 0.23786777634509437 1.0 ['ENST00000557638.1_1_14:36152973-36153102:-|nuORF'] 81329 11622 PLANSNTSGY True H1975_Epitope_Rep2 1022.4668887067401 1022.46578993586 49.771 2 -0.7705940677371563 0.23788662437180408 1.0 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'TRIP12|p.S1195Lfs*24|1|0.13|ENSG00000153827|chr2:229796599-229796599|A/-|frameshift_variant', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 39650 20734 HLPLLDLLL True PC9_epitope_Rep4 1045.6535672776101 1045.6524699358602 87.918 2 -0.7706007256267232 0.23788662437180408 1.0 ['ENST00000480958.1_1_17:41902775-41908980:-|nuORF'] 1687 7916 AEGFNQADK True NCI_RA007_Epitope_Rep1 978.4406739588999 978.43956993586 34.785 2 -0.7706137969911997 0.23788662437180408 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.S4073F|1|0.16|ENSG00000197102|chr14:102042231-102042231|C/T|missense_variant'] 131923 19523 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.6399499358602 81.982 2 -0.770623657362309 0.23789779054093652 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 58279 11066 LELSGNDFK True H1975_Epitope_Rep1 1021.50802524273 1021.50692993586 47.529 2 -0.7706353082551787 0.23789849976558838 1.0 ['nc|ENSG00000100565|Q0VAA2|LRRC74A', 'ENSG00000100565|ENST00000689127|LRRC74A', 'nc|ENSG00000100565|Q0VAA2-2|LRRC74A'] 11588 6067 DGEEQQPPHEA True NCI_RA007_Epitope_Rep1 1235.50545904343 1235.50436993586 27.637 2 -0.7706736621649928 0.23789849976558838 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 142078 28456 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 118.09 3 -0.7706957014831525 0.23789849976558838 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 101161 9904 SLGSMGFL True PC9_epitope_Rep2 810.3945757136199 810.39346993586 43.426 2 -0.7707104623402944 0.23789849976558838 1.0 ['ENSG00000166507|ENST00000309979|NDST2', 'nc|ENSG00000166507|P52849-2|NDST2'] 101621 9694 SLLRELHCP True NCI_RA007_Epitope_Rep1 1066.5593496229399 1066.5582499358602 41.709 2 -0.7707974535427193 0.23792431545482515 1.0 ['nc|ENSG00000130244|Q17RN3-2|FAM98C', 'ENSG00000130244|ENST00000252530|FAM98C'] 11474 12111 DFEYSTQSY True H1975_Epitope_Rep2 1138.44548455582 1138.44497496793 51.668 1 -0.7708115983977823 0.23794315851157338 1.0 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'ELP3-PNOC|1|fusion', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 33641 14953 GLGLEDELR True PC9_epitope_Rep1 1000.5189242795999 1000.51782993586 62.339 2 -0.770829186241397 0.23794315851157338 1.0 ['ENSG00000160741|ENST00000368633|CRTC2', 'ENST00000461638.6_1_1:153920587-153921610:-|nuORF', 'CRTC2|p.E661V|1|0.27|ENSG00000160741|chr1:153948209-153948209|T/A|missense_variant'] 132512 6037 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep1 1029.44371111445 1029.4426099358602 28.035 2 -0.7708398553215307 0.23794315851157338 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 34419 9192 GPIQSAKL True PC9_epitope_Rep5 812.4756029156399 812.4745099358599 40.301 2 -0.7708637175115359 0.2379508364829627 1.0 ['ENST00000566515.5_1_15:43486293-43487036:+|nuORF'] 59065 8854 LEWDMEKEL True PC9_epitope_Rep3 1191.5481758025498 1191.54652490379 39.008 3 -0.7708820871925187 0.2379508364829627 1.0 ['nc|ENSG00000177694|Q58DX5-2|NAALADL2', 'ENST00000485853.5_1_3:174577149-174974391:+|nuORF', 'ENST00000473253.5_1_3:174581768-175298945:+|nuORF', 'ENSG00000177694|ENST00000454872|NAALADL2'] 10233 26098 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 108.74 1 -0.770904020067407 0.23796619107608472 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 61001 17435 LIEKVSLIIF True PC9_epitope_Rep1 1173.7372969015698 1173.73564490379 71.861 3 -0.7709091858113581 0.23796619107608472 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 49597 12660 KFYRPENTHKS True NCI_RA007_Epitope_Rep2 1405.7102472899298 1405.70967496793 53.857 1 -0.7709200682033767 0.23796619107608472 1.0 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 15475 19097 EALQKVTIF True PC9_epitope_Rep2 1047.59644632431 1047.5953499358602 78.826 2 -0.7709385623171358 0.23796619107608472 1.0 ['nc|ENSG00000137962|Q52LW3-2|ARHGAP29'] 11618 6583 DGHRAPPP True H1975_Epitope_Rep2 845.4143996414099 845.41330993586 30.232 2 -0.7709945107741305 0.2379885158492998 1.0 ['ENSG00000138439|ENST00000392238|FAM117B'] 130286 13475 VSGTWHRQ True H1975_Epitope_Rep3 969.4780625271301 969.47696993586 57.105 2 -0.7710196026547985 0.2379885158492998 1.0 ['ENST00000424845.5_1_12:53564215-53567250:-|nuORF'] 121305 11790 VETQKLAYME True NCI_RA007_Epitope_Rep1 1210.5903749676997 1210.58926993586 49.839 2 -0.7710385346873767 0.23799967774538955 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 81937 20999 PLSSEPPAA True NCI_RA007_Epitope_Rep2 867.4337976733099 867.43324496793 86.861 1 -0.7710797723194095 0.2380108393144866 1.0 ['ENSG00000124608|ENST00000244571|AARS2', 'AARS2|p.H263Mfs*47|1|0.16|ENSG00000124608|chr6:44310407-44310407|C/-|frameshift_variant'] 68542 12923 LTGIWQMRHLK True H1975_Epitope_Rep3 1381.7652600682502 1381.76416993586 54.936 2 -0.7712045754359023 0.23805339542785173 1.0 ['nc|ENSG00000158604|Q7Z7H5-2|TMED4', 'ENSG00000158604|ENST00000457408|TMED4'] 10867 17006 CVSHIGAILA True PC9_epitope_Rep5 982.5269868654999 982.52588993586 70.432 2 -0.7712435570712575 0.23805339542785173 1.0 ['OR52K2|p.T242K|1|0.29|ENSG00000181963|chr11:4450064-4450064|C/A|missense_variant', 'ENSG00000181963|ENST00000325719|OR52K2'] 84130 19931 PYANYTFNV True PC9_epitope_Rep4 1087.49746055903 1087.49687496793 84.8 1 -0.771244965137876 0.23805339542785173 1.0 ['EPHA1|p.E420Kfs*34|1|0.41|ENSG00000146904|chr7:143398679-143398679|C/-|frameshift_variant', 'nc|ENSG00000146904|P21709-3|EPHA1', 'nc|ENSG00000146904|P21709-2|EPHA1', 'ENSG00000146904|ENST00000275815|EPHA1'] 134556 9681 VYSEAARVLQ True PC9_epitope_Rep3 1134.6033226098998 1134.6022299358601 42.186 2 -0.7713215445439563 0.23805339542785173 1.0 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 86826 7476 QLQAHLDHL True PC9_epitope_Rep2 1073.56179215109 1073.5606899358602 34.128 2 -0.7713229728540859 0.23805339542785173 1.0 ['ENSG00000144395|ENST00000389175|CCDC150', 'CCDC150|p.N680Tfs*24|1|0.23|ENSG00000144395|chr2:196719540-196719549|ACTGCAAAGT/-|frameshift_variant'] 79695 14687 PDSFNIPGSS True PC9_epitope_Rep6 1019.45598966987 1019.4554749679301 68.425 1 -0.7713334693795865 0.23805339542785173 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 79781 8243 PEDNFPDEEK True NCI_RA007_Epitope_Rep2 1218.5040620611 1218.5029699358602 36.7 2 -0.7713642831072297 0.23805339542785173 1.0 ['ENSG00000012983|ENST00000682126|MAP4K5', 'ENST00000554990.5_1_14:50886739-50915587:-|nuORF'] 106650 7414 STSSWPEYFK True NCI_RA007_Epitope_Rep4 1230.5557037111396 1230.55460993586 35.16 2 -0.7713750875628369 0.23805339542785173 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 138812 19262 YIWVKGRWKWK True PC9_epitope_Rep2 1548.87177374212 1548.8701349037901 79.465 3 -0.7713842110482598 0.23805339542785173 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 57257 6107 LDYEIRYYEKE True PC9_epitope_Rep1 1519.7194745609497 1519.71781490379 28.305 3 -0.7713933813993743 0.23805339542785173 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1'] 118882 12018 VADASKSVQV True PC9_epitope_Rep1 1002.53457434374 1002.53346993586 51.089 2 -0.7714131033570149 0.23805339542785173 1.0 ['ENSG00000241685|ENST00000262942|ARPC1A', 'ENST00000471960.5_2_7:98951595-98957666:+|nuORF', 'nc|ENSG00000241685|Q92747-2|ARPC1A'] 81382 18289 PLDQLNLL True PC9_epitope_Rep3 924.5280324113199 924.52692993586 75.554 2 -0.7714253346000063 0.23805339542785173 1.0 ['ENST00000311765.3_1_16:66920419-66920542:+|nuORF'] 98541 12891 SFNTNFNGN True PC9_epitope_Rep5 1013.42027286749 1013.4191699358599 54.595 2 -0.7714498138100907 0.23805339542785173 1.0 ['USP29|p.C232F|1|0.37|ENSG00000131864|chr19:57129370-57129370|G/T|missense_variant'] 72448 5823 MKSEEKSL True NCI_RA007_Epitope_Rep1 950.4742825862999 950.47318993586 26.705 2 -0.7715335841104781 0.23816357911693636 1.0 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2', 'ENSG00000084453|ENST00000683939|SLCO1A2'] 100846 6712 SLEPRQHFN True NCI_RA007_Epitope_Rep3 1126.5519557433802 1126.55084993586 33.488 2 -0.7715451443843322 0.23816357911693636 1.0 ['ENSG00000170485|ENST00000335681|NPAS2', 'ENST00000474550.5_1_2:101587368-101598935:+|nuORF'] 27530 10797 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42374496793 46.418 1 -0.771601381402325 0.23817473567056205 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 120875 5270 VEMYDLRWDRW True NCI_RA007_Epitope_Rep3 1567.7241831019098 1567.7225249037901 27.735 3 -0.7716262162626013 0.23819007175281887 1.0 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 6481 15526 APSNTFVAP True PC9_epitope_Rep2 902.4497820906199 902.44868993586 64.994 2 -0.7716489818143629 0.23819007175281887 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 101337 10590 SLISCWTWPKG True NCI_RA007_Epitope_Rep2 1276.6274291827601 1276.6263299358602 45.792 2 -0.7716522704365222 0.23819007175281887 1.0 ['ENST00000577827.5_1_18:8376476-8376536:+|nuORF'] 135613 24385 WLKKILLLL True H1975_Epitope_Rep3 1138.7841875243398 1138.78308993586 101.52 2 -0.7716682171086034 0.23819007175281887 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 27532 11027 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42374496793 47.304 1 -0.7717301427432093 0.23820889403013487 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 59868 5693 LGGAEAGPK True NCI_RA007_Epitope_Rep5 798.42356734278 798.42246993586 28.586 2 -0.7717355516586265 0.23820889403013487 1.0 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'nc|ENSG00000147689|Q86UY5-2|FAM83A'] 81000 11096 PIKQHTFLKK True NCI_RA007_Epitope_Rep4 1238.7499272739399 1238.7482849037901 49.556 3 -0.7717719322477605 0.23820889403013487 1.0 ['NDUFAF7|p.N362Kfs*5|1|0.34|ENSG00000003509|chr2:37247598-37247599|-/A|frameshift_variant'] 130413 23128 VSLRRRSRFRR True PC9_epitope_Rep4 1487.9021794369498 1487.90108993586 97.18 2 -0.7718287726446871 0.2382346911880985 1.0 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 52403 7263 KKQFMKNCQ True NCI_RA007_Epitope_Rep2 1153.57361978809 1153.57198490379 32.872 3 -0.771855094061458 0.2382458452302511 1.0 ['ENSG00000111536|ENST00000229134|IL26'] 56157 10790 LAVPTHHSL True PC9_epitope_Rep5 973.5345147740902 973.53340993586 46.494 2 -0.7718948303700249 0.2382569989457655 1.0 ['ENST00000422703.5_1_2:174136296-174136326:-|nuORF'] 131922 19060 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.6399499358602 80.179 2 -0.7719355504902129 0.2382758166298189 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 44826 8085 INDRQYDSRGR True H1975_Epitope_Rep1 1378.6701733830998 1378.66852490379 36.042 3 -0.771958661723821 0.2382758166298189 1.0 ['nc|ENSG00000101076|P41235-7|HNF4A', 'nc|ENSG00000164749|Q14541|HNF4G', 'nc|ENSG00000101076|P41235-3|HNF4A', 'nc|ENSG00000101076|P41235-6|HNF4A', 'nc|ENSG00000164749|Q14541-2|HNF4G', 'ENSG00000101076|ENST00000316673|HNF4A', 'ENSG00000164749|ENST00000396423|HNF4G', 'nc|ENSG00000101076|P41235-2|HNF4A', 'ENST00000372920.1_1_20:43030124-43058302:+|nuORF', 'nc|ENSG00000101076|P41235|HNF4A', 'nc|ENSG00000101076|P41235-4|HNF4A'] 42916 17330 IERSEMFKKP True PC9_epitope_Rep3 1263.66454296747 1263.66289490379 71.834 3 -0.7719709509712502 0.2382758166298189 1.0 ['ENSG00000187498|ENST00000375820|COL4A1'] 120339 8552 VEEEEEYI True PC9_epitope_Rep5 1038.43933654622 1038.4382299358601 37.839 2 -0.7720527717596954 0.23831625183016106 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 87049 10447 QNFFLQEF True PC9_epitope_Rep3 1071.5025459394699 1071.5014499358601 45.121 2 -0.7720853601220519 0.2383274036983353 1.0 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1', 'ENST00000563013.1_1_15:75653860-75654411:-|nuORF', 'ENST00000564785.5_1_15:75653860-75654842:-|nuORF', 'ENST00000563058.5_1_15:75653361-75654692:-|nuORF'] 107240 10826 SVKEVLQKHF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 46.528 3 -0.7721114656772267 0.23834970645506054 1.0 ['CON__Q2YDI2'] 130293 13560 VSHEHLEGAL True PC9_epitope_Rep3 1090.5407223533398 1090.5396299358601 57.213 2 -0.7721308174619793 0.23834970645506054 1.0 ['ENSG00000119912|ENST00000265986|IDE', 'ENST00000478361.6_1_10:94240585-94297282:-|nuORF'] 18761 13785 ELCLWQNGF True PC9_epitope_Rep5 1108.50116604048 1108.5000699358602 58.043 2 -0.7721721550197806 0.23839013820566876 1.0 ['nc|ENSG00000162496|O75911-2|DHRS3', 'ENST00000482265.1_1_1:12640388-12676590:-|nuORF'] 40302 8167 HQNVAQLSL True NCI_RA007_Epitope_Rep3 1008.53524305008 1008.53414993586 39.244 2 -0.7721978861535858 0.23840545763307372 1.0 ['ENSG00000149781|ENST00000345728|FERMT3', 'nc|ENSG00000149781|Q86UX7|FERMT3'] 13745 11351 DQDKYRYRYPK True NCI_RA007_Epitope_Rep2 1530.75792575834 1530.7568299358602 48.744 2 -0.7722069178643541 0.23840545763307372 1.0 ['ENSG00000158571|ENST00000375006|PFKFB1', 'nc|ENSG00000158571|P16118-2|PFKFB1', 'ENST00000417753.5_1_3:48557182-48594149:-|nuORF', 'nc|ENSG00000114268|Q16877-3|PFKFB4', 'ENSG00000114268|ENST00000232375|PFKFB4'] 94062 14616 RRLENRFYRRI True H1975_Epitope_Rep3 1577.9015107306097 1577.9004099358601 61.588 2 -0.7722107928836053 0.23840545763307372 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'ENST00000473691.1_1_X:79938122-79975072:-|nuORF'] 3344 6694 AGGLYGID True H1975_Epitope_Rep3 764.37046914076 764.36992496793 30.704 1 -0.7722219580652293 0.23840545763307372 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B'] 100244 8312 SIWYFYYFFFS True NCI_RA007_Epitope_Rep2 1568.7016396688398 1568.6999849037902 36.971 3 -0.7723306769708927 0.23847516432680907 1.0 ['L1MD2_dup3350|chr5:176309943-176310863:+|1.3301102545016334|0.265229905058228|2.33|541.0|48|1|anti-sense'] 110453 11810 TFDLYDDWMRA True H1975_Epitope_Rep2 1431.61290131743 1431.61126490379 50.503 3 -0.7723700097422108 0.23851559068950373 1.0 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000466097.1_1_22:38042800-38046733:+|nuORF'] 94797 17436 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 73.851 2 -0.7724015581848063 0.23851975465870331 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 133790 18561 VYFGHDSEL True PC9_epitope_Rep1 1065.47672511445 1065.47562993586 76.182 2 -0.7724077564707833 0.23851975465870331 1.0 ['ENSG00000185792|ENST00000332836|NLRP9', 'nc|ENSG00000185792|Q7RTR0-2|NLRP9'] 92842 20511 RPDLLCQRR True H1975_Epitope_Rep2 1155.6294948714299 1155.62785490379 84.983 3 -0.7724363914257321 0.23851975465870331 1.0 ['ENST00000583283.1_1_17:61904916-61905045:+|nuORF'] 17080 12234 EGKKGKTTI True PC9_epitope_Rep6 960.5603951687599 960.55928993586 58.433 2 -0.7724769971431167 0.23853090142576924 1.0 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 12341 15642 DIQVKRIHEYK True H1975_Epitope_Rep3 1427.78849761063 1427.78740993586 65.584 2 -0.7724910330804301 0.23853855612155278 1.0 ['ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM'] 36135 9664 GVAPFTIAR True NCI_RA007_Epitope_Rep4 930.5287011176599 930.52760993586 44.022 2 -0.7725110366800825 0.23853855612155278 1.0 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3'] 83269 17055 PTAEWFCPTL True PC9_epitope_Rep6 1163.5321318155898 1163.53102993586 78.167 2 -0.7725506826807574 0.2385497021239223 1.0 ['ENST00000541199.5_3_6:142623767-142688843:+|nuORF', 'ENST00000435011.6_3_6:142623767-142688843:+|nuORF'] 61513 24558 LKENAALLTA True PC9_epitope_Rep4 1042.60225998074 1042.60116993586 102.95 2 -0.77261605971264 0.2386159047995433 1.0 ['ENSG00000171992|ENST00000307662|SYNPO', 'nc|ENSG00000171992|Q8N3V7-3|SYNPO', 'nc|ENSG00000171992|Q8N3V7|SYNPO'] 126205 12867 VLGDEVIG True PC9_epitope_Rep2 800.4279840168799 800.42688993586 54.793 2 -0.7726176333938338 0.2386159047995433 1.0 ['ENSG00000214595|ENST00000356458|EML6'] 79094 18883 PALNEKQL True PC9_epitope_Rep2 911.5076313199099 911.50652993586 77.999 2 -0.7726239755790609 0.23862355644677333 1.0 ['ENSG00000178772|ENST00000323830|CPN2'] 20432 22943 EPFPLRLPQR True NCI_RA007_Epitope_Rep5 1251.7087907379498 1251.70714490379 95.477 3 -0.7726769942732415 0.23862355644677333 1.0 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 102565 16308 SLVVFLSNRL True PC9_epitope_Rep4 1146.67609362734 1146.6749899358601 70.69 2 -0.7727225472848184 0.23863470038933288 1.0 ['ENST00000397776.2_1_1:158424733-158425060:+|nuORF', 'nc|ENSG00000149547|O14681-3|EI24', 'ENSG00000149547|ENST00000278903|EI24'] 19604 15525 ELQPSAVAAAV True PC9_epitope_Rep5 1054.56587447202 1054.56476993586 64.726 2 -0.7727935928154324 0.23872667398463226 1.0 ['ENST00000260526.10_1_1:94697171-94703089:-|nuORF'] 102651 12260 SLWYQQTLP True H1975_Epitope_Rep3 1134.5709598524602 1134.5698699358602 52.335 2 -0.7728044475104711 0.23872667398463226 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 63950 19575 LNSVTLLL True PC9_epitope_Rep4 871.53786881903 871.53676993586 83.419 2 -0.7728440879934242 0.23872667398463226 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 129980 26197 VRVRRVGRA True H1975_Epitope_Rep1 1067.6788280223498 1067.6782749679298 108.8 1 -0.7728643284792719 0.23872733392849302 1.0 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF'] 129018 7762 VQLPAKQP True NCI_RA007_Epitope_Rep1 879.51780208079 879.51670993586 34.184 2 -0.7728708374267801 0.23872733392849302 1.0 ['nc|ENSG00000168004|Q96KN8-2|PLAAT5', 'nc|ENSG00000168004|Q96KN8|PLAAT5', 'ENSG00000168004|ENST00000540857|PLAAT5'] 2683 5196 AESRNDHDCQ True NCI_RA007_Epitope_Rep4 1173.44689862149 1173.44580993586 26.519 2 -0.7728720650293099 0.23872733392849302 1.0 ['ENST00000532734.5_2_11:8772194-8788213:-|nuORF', 'ENST00000528196.5_2_11:8772194-8795704:-|nuORF', 'ENST00000526757.5_1_11:8772194-8832832:-|nuORF', 'ENST00000528523.5_1_11:8772194-8832231:-|nuORF', 'ENST00000313726.10_1_11:8772194-8832231:-|nuORF'] 31503 14633 GEDCYFFF True NCI_RA007_Epitope_Rep5 1026.3793195723 1026.3782299358602 62.954 2 -0.7728910633337915 0.23872733392849302 1.0 ['nc|ENSG00000214558|P0DQW0|ZC3H11C', 'ENSG00000215817|ENST00000651890|ZC3H11B', 'ENSG00000058673|ENST00000367210|ZC3H11A'] 77960 12979 NVLRCIRESFF True NCI_RA007_Epitope_Rep1 1382.7128901422195 1382.71178993586 54.476 2 -0.7728924289131346 0.2387384750475633 1.0 ['UQCRQ|p.R41C|1|0.15|ENSG00000164405|chr5:132867002-132867002|C/T|missense_variant'] 117235 15837 TVLQNNVV True PC9_epitope_Rep2 885.4919812557699 885.49088993586 66.175 2 -0.7729508406398796 0.23875726223054747 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 113855 9681 TNIENNNNKFY True NCI_RA007_Epitope_Rep2 1369.6262428824498 1369.62514993586 42.275 2 -0.7729512165794159 0.23875726223054747 1.0 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 22178 3885 ESTKKNDDLDR True NCI_RA007_Epitope_Rep2 1319.6317221857098 1319.63008490379 19.748 3 -0.7729599022691738 0.23875726223054747 1.0 ['ENST00000464842.1_1_22:38965316-38966082:-|nuORF'] 45874 5620 ISDRYGAP True PC9_epitope_Rep1 877.4293809992099 877.42828993586 26.443 2 -0.7731556897955333 0.2387760477639897 1.0 ['ENSG00000170788|ENST00000372202|DYDC1', 'nc|ENSG00000170788|Q8WWB3-2|DYDC1'] 95207 24522 RVKKGGGKK True NCI_RA007_Epitope_Rep3 956.6243328379998 956.6237849679301 106.1 1 -0.7731651286440179 0.2387760477639897 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 12892 11689 DLIQHQKI True PC9_epitope_Rep1 993.56072952193 993.55962993586 49.838 2 -0.7731672075144397 0.2387760477639897 1.0 ['ENSG00000180479|ENST00000451802|ZNF571'] 83931 14444 PVQPTHAPGTT True PC9_epitope_Rep3 1104.55637241748 1104.55526993586 60.664 2 -0.7731704978415004 0.2387801987152285 1.0 ['ENSG00000078081|ENST00000265598|LAMP3'] 2450 9460 AEQKKWEEQHE True NCI_RA007_Epitope_Rep5 1440.66335666716 1440.66224993586 43.024 2 -0.7731928427469789 0.2387801987152285 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 95286 25440 RVPVGGGP True H1975_Epitope_Rep3 737.41842239269 737.4178749679301 105.83 1 -0.7731930945305104 0.2387801987152285 1.0 ['ENSG00000236104|ENST00000431845|ZBTB22'] 46249 5395 ISNVMICPFRH True NCI_RA007_Epitope_Rep2 1315.6529327379499 1315.65127490379 25.604 3 -0.7732454911776027 0.23884702611749214 1.0 ['ENST00000478105.5_1_21:47981571-47987532:+|nuORF'] 69698 22017 LVEEENICLHW True NCI_RA007_Epitope_Rep1 1383.64928682615 1383.64818993586 90.186 2 -0.7732610880253826 0.23884702611749214 1.0 ['ENST00000480912.5_1_6:31847863-31860642:-|nuORF'] 83542 17726 PTVPSTEAQ True PC9_epitope_Rep5 928.4501760134399 928.44906993586 73.199 2 -0.773262861502756 0.23884702611749214 1.0 ['ENSG00000171872|ENST00000372299|KLF17', 'KLF17|p.V336Yfs*18|1|0.26|ENSG00000171872|chr1:44130590-44130590|G/-|frameshift_variant'] 141944 19626 YVHILFAILKI True NCI_RA007_Epitope_Rep4 1328.82202958504 1328.82037490379 84.805 3 -0.7732824567525766 0.23884702611749214 1.0 ['OR2A25|p.C222F|1|0.14|ENSG00000221933|chr7:144074884-144074884|G/T|missense_variant'] 30281 3548 GAAAPPPAPR True NCI_RA007_Epitope_Rep4 903.4926499621099 903.49154993586 19.661 2 -0.7732860347654689 0.23884702611749214 1.0 ['ENST00000520220.6_2_8:56792441-56792612:+|nuORF'] 17659 4969 EHLAEYLEVYW True H1975_Epitope_Rep3 1450.6768814729799 1450.67524490379 24.241 3 -0.7732958474954688 0.23884702611749214 1.0 ['ENST00000548860.5_1_12:49218876-49221679:+|nuORF', 'nc|ENSG00000167535|P54284-5|CACNB3', 'nc|ENSG00000167535|P54284-2|CACNB3', 'nc|ENSG00000167535|P54284-3|CACNB3', 'nc|ENSG00000167535|P54284-4|CACNB3', 'ENSG00000167535|ENST00000301050|CACNB3'] 114405 14403 TPTFRPSSSI True PC9_epitope_Rep6 1091.56112344475 1091.56002993586 67.299 2 -0.7733167869790111 0.23885816287712522 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2'] 129873 23693 VRRSLKKL True H1975_Epitope_Rep2 998.6712830304199 998.67018993586 97.629 2 -0.7733500542142846 0.2388658044127114 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25', 'ENST00000548432.5_1_12:82832322-82872800:+|nuORF'] 14589 8769 DTWESLQK True PC9_epitope_Rep5 1005.47672511445 1005.4761749679301 38.672 1 -0.7733576075593798 0.2388658044127114 1.0 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.W92R|1|0.2|ENSG00000173614|chr1:9975750-9975750|T/A|missense_variant', 'NMNAT1|p.W92C|1|0.19|ENSG00000173614|chr1:9975752-9975752|G/T|missense_variant'] 20330 11407 ENVMEDFLK True PC9_epitope_Rep1 1123.52196105471 1123.52032490379 48.756 3 -0.7733916441521491 0.23887694040878432 1.0 ['ENST00000411990.6_1_1:207235951-207252361:+|nuORF', 'nc|ENSG00000123836|O60825-2|PFKFB2', 'ENSG00000123836|ENST00000367080|PFKFB2'] 107210 19036 SVIPTDPQV True PC9_epitope_Rep2 954.5022115863 954.50110993586 78.588 2 -0.7734962166407213 0.2389319678127286 1.0 ['nc|ENSG00000032742|Q13099-3|IFT88', 'ENSG00000032742|ENST00000351808|IFT88', 'nc|ENSG00000032742|Q13099-1|IFT88'] 118873 19576 VAAYSASKFAL True PC9_epitope_Rep1 1126.60225998074 1126.60116993586 80.125 2 -0.773520007689223 0.2389577328788167 1.0 ['ENSG00000117594|ENST00000367027|HSD11B1'] 27544 9333 FNDGNAAVV True PC9_epitope_Rep6 905.4242956187699 905.42374496793 46.081 1 -0.7735371283220115 0.2389688670411985 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 42292 11651 IDVRQKVP True PC9_epitope_Rep3 953.5658149023699 953.56470993586 49.834 2 -0.7735530896788697 0.23898000087779614 1.0 ['nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 12830 7640 DLGIRNYAV True PC9_epitope_Rep2 1019.53999407735 1019.53888993586 34.756 2 -0.7736612749776424 0.23900576411036661 1.0 ['ABCA10|p.Q682L|1|0.79|ENSG00000154263|chr17:69190444-69190444|T/A|missense_variant'] 101184 11506 SLGVTVPV True H1975_Epitope_Rep1 770.4538048418999 770.4532549679301 49.242 1 -0.7736857005010188 0.23901689708141322 1.0 ['FCRL3|p.R468G|1|0.07|ENSG00000160856|chr1:157695338-157695338|T/C|missense_variant'] 23930 11661 EYLGKEEYL True NCI_RA007_Epitope_Rep3 1142.54955570154 1142.5484499358602 52.987 2 -0.773771639443906 0.2390426590204225 1.0 ['nc|ENSG00000165837|Q5W0A0-2|ERICH6B', 'ENSG00000165837|ENST00000298738|ERICH6B'] 142068 27571 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 113.83 3 -0.7738058656371066 0.23906842020568486 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 70110 7302 LVPELQAT True H1975_Epitope_Rep3 869.4858332461699 869.48472993586 33.063 2 -0.7739373767404789 0.23912121345093393 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 25126 11631 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 51.692 2 -0.773944810591551 0.23912121345093393 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 94459 22296 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 92.141 2 -0.7739625070714024 0.23912121345093393 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 81810 12997 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 54.863 2 -0.7739788669527335 0.23912121345093393 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 129202 16530 VQSTSQLSI True PC9_epitope_Rep5 961.5080252427299 961.5074749679301 68.585 1 -0.7739908758555556 0.23912121345093393 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 92169 15653 RLFPCWGDH True PC9_epitope_Rep1 1129.5127337836898 1129.51108490379 65.029 3 -0.7739927248370089 0.23912121345093393 1.0 ['ENST00000419248.5_2_17:1627955-1628000:+|nuORF'] 74038 6218 NDLALVQLWT True H1975_Epitope_Rep3 1171.62372370131 1171.62262993586 28.93 2 -0.774001355143251 0.23912121345093393 1.0 ['ENST00000602410.1_1_2:233387240-233387915:+|nuORF', 'ENSG00000237412|ENST00000617714|PRSS56'] 142069 27633 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 114.17 3 -0.7740149941211574 0.23912121345093393 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 142076 27892 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 115.01 3 -0.7740165678720727 0.23912121345093393 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 30633 3875 GAKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 21.086 3 -0.774023800691925 0.23912121345093393 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 141393 19175 YTEKEGPLL True PC9_epitope_Rep6 1048.54407639828 1048.5429699358601 86.409 2 -0.7740651804469166 0.2391253473745795 1.0 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000546416.5_1_12:95425225-95443026:-|nuORF', 'nc|ENSG00000120798|P13056-2|NR2C1', 'nc|ENSG00000120798|P13056-3|NR2C1'] 132514 5345 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep2 1029.44371111445 1029.4426099358602 25.947 2 -0.7740659014379226 0.2391253473745795 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 102360 7654 SLSWSAQPAV True PC9_epitope_Rep1 1044.5240096600398 1044.52290993586 34.263 2 -0.7741036882238337 0.2391253473745795 1.0 ['ENST00000474141.5_2_7:99746590-99751116:+|nuORF', 'ENST00000488338.2_1_7:99750348-99751116:+|nuORF', 'LAMTOR4|p.V20Gfs*39|1|0.09|ENSG00000188186|chr7:100149554-100149557|TACT/-|frameshift_variant'] 37687 3664 GVYHRNPLIRK True H1975_Epitope_Rep3 1351.78368701371 1351.78204490379 19.136 3 -0.774129604873961 0.23913647599128285 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2'] 138265 7322 YHAADLSL True PC9_epitope_Rep4 888.43413202648 888.43302993586 35.492 2 -0.7742328129163286 0.2391879835607623 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 94466 24026 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 98.938 2 -0.7742357898527776 0.2391879835607623 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 12509 12037 DKIEHKLQHHK True NCI_RA007_Epitope_Rep1 1411.76843087239 1411.76732993586 50.808 2 -0.7742483119652752 0.23919561243144424 1.0 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 62787 8105 LLLSSSDP True NCI_RA007_Epitope_Rep1 830.43854870058 830.43744993586 35.525 2 -0.7742951864289696 0.23919561243144424 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 57840 9144 LEEVMSPVTTP True PC9_epitope_Rep3 1201.59004061453 1201.58894993586 40.111 2 -0.7743036500992798 0.2392067392067392 1.0 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B', 'ENST00000525945.1_1_11:123484122-123493300:+|nuORF', 'nc|ENSG00000023171|Q3KR37-2|GRAMD1B', 'nc|ENSG00000023171|Q3KR37|GRAMD1B', 'nc|ENSG00000023171|Q3KR37-4|GRAMD1B', 'ENST00000532581.5_1_11:123431173-123490076:+|nuORF', 'nc|ENSG00000023171|Q3KR37-3|GRAMD1B'] 87198 21054 QPILYGDF True PC9_epitope_Rep5 951.4701831820299 951.46908993586 86.044 2 -0.7743386125881941 0.23921086883399875 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 93547 11081 RQLGLPTAL True NCI_RA007_Epitope_Rep5 967.5814649665099 967.58036993586 49.257 2 -0.774343792170926 0.23921086883399875 1.0 ['ENSG00000053372|ENST00000330263|MRTO4'] 101785 18276 SLPALFNIDLL True H1975_Epitope_Rep1 1214.69107498514 1214.68996993586 76.164 2 -0.7743677700894864 0.23921086883399875 1.0 ['SCN2A|p.G1664D|1|0.18|ENSG00000136531|chr2:165388797-165388797|G/A|missense_variant'] 70614 25590 LWHIWRERN True NCI_RA007_Epitope_Rep1 1308.68397297244 1308.68233490379 105.91 3 -0.7743966535800119 0.23922199473530273 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 142070 27758 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 114.85 3 -0.7744332510892594 0.23922612345173508 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 101784 18198 SLPALFNIDLL True H1975_Epitope_Rep1 1214.69107498514 1214.68996993586 75.827 2 -0.7744619139299728 0.23922612345173508 1.0 ['SCN2A|p.G1664D|1|0.18|ENSG00000136531|chr2:165388797-165388797|G/A|missense_variant'] 25075 13447 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 56.948 2 -0.7744786920302954 0.23922612345173508 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 52687 20403 KLVVIERDL True PC9_epitope_Rep1 1083.6651945904698 1083.6640899358601 83.293 2 -0.7745212996981564 0.23926649508656997 1.0 ['ENST00000338274.4_1_2:26032960-26033152:-|nuORF'] 87145 9063 QPEQTTISIPQ True NCI_RA007_Epitope_Rep5 1240.62993128056 1240.62882993586 41.517 2 -0.7745360267245871 0.2392671228870562 1.0 ['PRDM10|p.P460S|1|0.14|ENSG00000170325|chr11:129931168-129931168|G/A|missense_variant'] 57227 9954 LDWARERLEQQ True NCI_RA007_Epitope_Rep1 1442.7266256300602 1442.72552993586 42.723 2 -0.7745440231040357 0.2392671228870562 1.0 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 141739 5823 YTWRWVWSWEW True PC9_epitope_Rep6 1683.7622828627896 1683.76063490379 30.614 3 -0.7745460562788546 0.2392671228870562 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 34164 6429 GNFLTKKYNH True NCI_RA007_Epitope_Rep2 1220.6302060640799 1220.62855490379 29.614 3 -0.7745486041337659 0.2392671228870562 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 100571 15313 SLCCHCHS True PC9_epitope_Rep6 888.3040635404002 888.30296993586 71.021 2 -0.774617302127047 0.23929286873620026 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 83084 4841 PSMKFHGV True PC9_epitope_Rep3 901.44800826881 901.44690993586 23.717 2 -0.7746662900364708 0.2393227377070753 1.0 ['ZNF536|p.V949F|1|0.39|ENSG00000198597|chr19:30548464-30548464|G/T|missense_variant'] 142521 9506 YYIRGATTTF True NCI_RA007_Epitope_Rep3 1191.5924235730297 1191.5913299358601 44.485 2 -0.7746904924785397 0.2393227377070753 1.0 ['DPT|p.S176F|1|0.12|ENSG00000143196|chr1:168701029-168701029|G/A|missense_variant', 'ENSG00000143196|ENST00000367817|DPT'] 69758 10045 LVFQQFDLE True H1975_Epitope_Rep2 1137.57062549929 1137.5695299358601 43.63 2 -0.7747065935489066 0.2393227377070753 1.0 ['nc|ENSG00000159403|P00736|C1R', 'ENSG00000159403|ENST00000647956|C1R', 'ENST00000536092.1_12:7243942-7244984:-|nuORF', 'ENST00000545466.1_12:7242646-7244984:-|nuORF', 'ENST00000540394.2_12:7241870-7244269:-|nuORF'] 142081 28767 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 119.8 3 -0.7747088878494234 0.2393227377070753 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 117584 6642 TVSQPGLAA True NCI_RA007_Epitope_Rep3 842.4497820906198 842.44868993586 33.194 2 -0.7747188675766873 0.23933036040646247 1.0 ['NCOR2-SCARB1|1|fusion', 'NCOR2-SCARB1|3|fusion', 'NCOR2-SCARB1|12|fusion', 'NCOR2-SCARB1|5|fusion', 'NCOR2-SCARB1|7|fusion', 'NCOR2-SCARB1|14|fusion', 'NCOR2-SCARB1|9|fusion', 'nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'NCOR2-SCARB1|10|fusion', 'ENST00000415380.6_1_12:125263015-125270898:-|nuORF'] 100654 16274 SLDIQHVLDKL True H1975_Epitope_Rep3 1279.71360133487 1279.71250993586 68.066 2 -0.7747671878282351 0.23933036040646247 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 14319 6356 DSYSKSGHKPD True NCI_RA007_Epitope_Rep1 1219.54692993259 1219.5458299358602 28.75 2 -0.7748197025738807 0.2393561026960641 1.0 ['ABCB1|p.L545Wfs*40|1|0.34|ENSG00000085563|chr7:87549440-87549440|G/-|frameshift_variant', 'ENSG00000085563|ENST00000622132|ABCB1', 'nc|ENSG00000085563|P08183-2|ABCB1'] 101707 7084 SLMRWRGT True PC9_epitope_Rep2 1005.51781916413 1005.51672993586 32.645 2 -0.7748366582651284 0.2393672237086422 1.0 ['FAT4|p.R1169W|1|0.46|ENSG00000196159|chr4:125319916-125319916|C/T|missense_variant'] 131822 10311 VTQMFNNPI True PC9_epitope_Rep1 1062.51681610462 1062.51570993586 44.546 2 -0.7748609820884238 0.2393678454993348 1.0 ['SLITRK3|p.C751F|1|0.09|ENSG00000121871|chr3:165188579-165188579|C/A|missense_variant'] 13729 9357 DPYFAEEVK True PC9_epitope_Rep5 1096.5076908895599 1096.5065899358601 40.947 2 -0.7748631666220144 0.2393678454993348 1.0 ['ENSG00000089048|ENST00000617257|ESF1'] 16884 13876 EFISLQLEDS True H1975_Epitope_Rep1 1179.56593404167 1179.5648299358602 58.523 2 -0.7749286307279972 0.2393678454993348 1.0 ['ENST00000466876.1_1_3:195006441-195012466:-|nuORF'] 36771 12826 GVKRRRLI True NCI_RA007_Epitope_Rep4 996.6668663563198 996.66576993586 56.419 2 -0.7749486613686486 0.2393678454993348 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 126444 10132 VLKSELNI True NCI_RA007_Epitope_Rep2 914.54368247546 914.54258993586 44.0 2 -0.7749925000120447 0.2393802075719924 1.0 ['nc|ENSG00000152910|Q9C0A0-2|CNTNAP4', 'ENSG00000152910|ENST00000611870|CNTNAP4'] 94791 19119 RSPRGILG True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50752993586 79.23 2 -0.7750132536538189 0.2393802075719924 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 141639 6633 YTSETYLMKHM True NCI_RA007_Epitope_Rep1 1402.6261088534202 1402.6250099358601 29.814 2 -0.7750147420580294 0.2393802075719924 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 4964 17037 ALGLANFNAI True PC9_epitope_Rep6 1002.5498304850599 1002.54872993586 78.089 2 -0.7750339603036831 0.2393802075719924 1.0 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.P503Sfs*32|1|0.14|ENSG00000163359|chr2:237381305-237381306|-/A|frameshift_variant'] 89279 4003 QVVWRSCR True NCI_RA007_Epitope_Rep4 1032.528718201 1032.5276299358602 21.652 2 -0.7750354366255965 0.2393802075719924 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 94793 18329 RSPRGILG True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50752993586 79.302 2 -0.775053869888867 0.2393802075719924 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 128573 12731 VPTLSSWL True NCI_RA007_Epitope_Rep4 901.49091862661 901.48982993586 56.027 2 -0.7750714437808146 0.2393802075719924 1.0 ['ENST00000491066.1_1_X:153697015-153697611:+|nuORF'] 68647 14401 LTIIGHGL True PC9_epitope_Rep2 822.4963383602201 822.49524993586 60.657 2 -0.7750824633894539 0.2393802075719924 1.0 ['ENSG00000064989|ENST00000392370|CALCRL', 'CALCRL|p.I284Hfs*23|1|0.04|ENSG00000064989|chr2:187359122-187359123|-/GTATG|frameshift_variant'] 40010 17665 HPQLNVQKRK True NCI_RA007_Epitope_Rep3 1246.7258377844198 1246.72420490379 77.456 3 -0.7751101569236527 0.2393802075719924 1.0 ['GRM7|p.E853Q|1|0.67|ENSG00000196277|chr3:7680154-7680154|G/C|missense_variant'] 4711 11997 ALCHHLPV True PC9_epitope_Rep1 888.4639926861199 888.46288993586 51.009 2 -0.7751264435866573 0.23939132595635204 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 139862 19757 YPPPEFQWYKD True NCI_RA007_Epitope_Rep2 1468.66631678928 1468.66520993586 81.813 2 -0.7751673480000806 0.23942117956588468 1.0 ['nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4', 'nc|ENSG00000037280|P35916-3|FLT4', 'ENST00000507059.5_1_5:180043993-180056331:-|nuORF'] 110032 6745 TEKLPKAP True H1975_Epitope_Rep2 882.5174677276199 882.51636993586 30.859 2 -0.7752206162085513 0.23942117956588468 1.0 ['nc|ENSG00000030304|O15146-3|MUSK', 'nc|ENSG00000030304|O15146-2|MUSK', 'ENSG00000030304|ENST00000374448|MUSK'] 74900 6149 NHIENQDECV True PC9_epitope_Rep6 1199.4877008043102 1199.4860549037899 32.081 3 -0.7752482954557961 0.23942117956588468 1.0 ['ENSG00000116221|ENST00000360840|MRPL37', 'ENST00000490670.1_1_1:54670749-54673061:+|nuORF'] 67982 9740 LTDESEILRF True PC9_epitope_Rep6 1221.62411762413 1221.62248490379 47.885 3 -0.7752514442707433 0.23942117956588468 1.0 ['nc|ENSG00000167861|Q8IV36-2|HID1', 'ENSG00000167861|ENST00000425042|HID1', 'ENST00000532395.5_1_17:72947667-72950470:-|nuORF', 'nc|ENSG00000167861|Q8IV36-3|HID1'] 142073 28000 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 116.2 3 -0.7752636141876968 0.23943229653882134 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 94287 16068 RRRGWREQRHR True NCI_RA007_Epitope_Rep1 1591.8780899474298 1591.8769899358601 66.605 2 -0.775331678131461 0.23947264568747534 1.0 ['ENST00000568956.1_1_19:56116859-56125214:+|nuORF'] 40965 5969 HTDGRWLRS True H1975_Epitope_Rep1 1126.5631891334199 1126.56208993586 28.03 2 -0.7754047218977812 0.23951299365664006 1.0 ['ENST00000531428.1_1_11:17099289-17099355:-|nuORF'] 102190 14444 SLRWERVF True PC9_epitope_Rep4 1091.5876129761098 1091.58650993586 63.468 2 -0.775447823075881 0.2395352236188249 1.0 ['ENSG00000055483|ENST00000449938|USP36'] 44482 19646 ILLFRRPLPK True H1975_Epitope_Rep1 1251.8179472641098 1251.81631490379 81.782 3 -0.7754556206716646 0.2395352236188249 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 55605 4139 LAIEAGFH True PC9_epitope_Rep4 856.4443027873599 856.44320993586 22.247 2 -0.775514312486152 0.2395872913804694 1.0 ['ENSG00000151632|ENST00000380753|AKR1C2', 'AKR1C2|p.L177Qfs*40|1|0.15|ENSG00000151632|chr10:4998666-4998667|GG/-|frameshift_variant', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 133120 17933 VVQPAATL True PC9_epitope_Rep5 797.46470387877 797.46360993586 73.997 2 -0.7755520853633463 0.2395872913804694 1.0 ['ADRB3|p.P92Q|1|0.07|ENSG00000188778|chr8:37966195-37966195|G/T|missense_variant'] 117495 10640 TVRGWCKNK True NCI_RA007_Epitope_Rep1 1090.5705830129798 1090.56948993586 45.376 2 -0.7755771291015917 0.2395872913804694 1.0 ['ENST00000498171.5_1_22:20077477-20097628:+|nuORF', 'nc|ENSG00000128191|Q8WYQ5-3|DGCR8', 'ENSG00000128191|ENST00000351989|DGCR8', 'ENST00000485802.1_1_22:20094124-20096613:+|nuORF'] 79219 7552 PAPLRAAPAA True PC9_epitope_Rep1 933.5396001545298 933.53850993586 33.867 2 -0.7755953786547016 0.2395872913804694 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 62884 10127 LLNIKSPSP True PC9_epitope_Rep6 967.57023157647 967.56912993586 49.569 2 -0.7755956661154818 0.2395872913804694 1.0 ['ENST00000586616.5_1_19:1483766-1490130:-|nuORF', 'ENST00000441747.6_1_19:1482426-1490130:-|nuORF'] 81535 11000 PLIGHVTG True PC9_epitope_Rep1 792.4493881678 792.44828993586 47.199 2 -0.7756055658995539 0.2395872913804694 1.0 ['ENSG00000145283|ENST00000273905|SLC10A6'] 112065 22590 TITKMLKAI True PC9_epitope_Rep5 1017.6256382776098 1017.62454993586 91.89 2 -0.7757002599648031 0.2396533582743906 1.0 ['ENSG00000079101|ENST00000692774|CLUL1'] 61830 4986 LLAVSHVG True H1975_Epitope_Rep3 794.46503823194 794.46394993586 24.308 2 -0.7757118719608626 0.2396533582743906 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 125546 25067 VKKATILIS True NCI_RA007_Epitope_Rep5 971.6379172134699 971.63682993586 103.92 2 -0.7757894623688059 0.2396936971167195 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 89278 10163 QVVVHLQYVST True NCI_RA007_Epitope_Rep1 1271.68738658703 1271.68628993586 43.543 2 -0.7758420699037664 0.23971651932490684 1.0 ['ENST00000284273.5_1_11:122681491-122681743:+|nuORF'] 137756 20281 YENLKWTLERK True PC9_epitope_Rep3 1478.7881632574597 1478.78706993586 83.263 2 -0.7759507704810389 0.23971651932490684 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57', 'CCDC57|p.E177Sfs*20|1|0.5|ENSG00000176155|chr17:82195352-82195352|C/-|frameshift_variant'] 60864 18423 LHWFLSRRRRR True NCI_RA007_Epitope_Rep2 1581.9229148815298 1581.9218099358602 76.428 2 -0.7759812938798334 0.23971651932490684 1.0 ['ENST00000448464.6_1_8:95952396-95952444:-|nuORF'] 43483 8865 IGKVVVQVLAE True PC9_epitope_Rep4 1153.7070594024497 1153.7054249037901 41.63 3 -0.7760162621470766 0.23971651932490684 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 59066 6135 LEWDMEKEL True PC9_epitope_Rep4 1191.5481758025498 1191.54652490379 30.613 3 -0.7760172552847975 0.23971651932490684 1.0 ['nc|ENSG00000177694|Q58DX5-2|NAALADL2', 'ENST00000485853.5_1_3:174577149-174974391:+|nuORF', 'ENST00000473253.5_1_3:174581768-175298945:+|nuORF', 'ENSG00000177694|ENST00000454872|NAALADL2'] 12110 10917 DIAQSRVEI True PC9_epitope_Rep4 1029.5454733806098 1029.54436993586 49.761 2 -0.7760392341977973 0.23971651932490684 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF', 'ENST00000512792.2_1_12:112191278-112193633:+|nuORF'] 63956 10558 LNSWLVENLNW True NCI_RA007_Epitope_Rep2 1386.6932002434598 1386.6921099358601 45.666 2 -0.7761418883828982 0.2397387378172626 1.0 ['chr14:19269380-19333702|149|10.55|0.36|4.86|-|1|NBEAP6,DUXAP10|1'] 63837 4611 LNKMEFTEY True H1975_Epitope_Rep3 1173.53761111885 1173.53650993586 22.858 2 -0.7761687605146858 0.2397387378172626 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5'] 13736 5042 DQALIKQT True NCI_RA007_Epitope_Rep2 915.50254593947 915.50144993586 24.236 2 -0.7762079901752731 0.23974984657646337 1.0 ['NFXL1|p.G665Vfs*27|1|0.05|ENSG00000170448|chr4:47878610-47878611|-/TTTTCCTTTCCTAAGA|frameshift_variant', 'nc|ENSG00000170448|Q6ZNB6-2|NFXL1', 'ENSG00000170448|ENST00000507489|NFXL1'] 37717 5968 GVYVCIIK True PC9_epitope_Rep2 893.5044605157699 893.50336993586 28.343 2 -0.7762481055757706 0.23978667445938048 1.0 ['ENSG00000143552|ENST00000368559|NUP210L'] 85114 13255 QELKWQKETLQ True NCI_RA007_Epitope_Rep2 1429.7565287760099 1429.75542993586 56.192 2 -0.7762693639855429 0.23978667445938048 1.0 ['ENSG00000186714|ENST00000335185|CCDC73', 'nc|ENSG00000186714|Q6ZRK6-2|CCDC73'] 5427 19363 ALTRNRRTRRW True NCI_RA007_Epitope_Rep1 1484.85489489136 1484.85378993586 79.474 2 -0.776364125410334 0.2398270042810596 1.0 ['ENST00000575285.1_1_16:3273894-3274698:-|nuORF', 'nc|ENSG00000010539|P98182-3|ZNF200', 'nc|ENSG00000010539|P98182-2|ZNF200', 'ENSG00000010539|ENST00000414144|ZNF200'] 2899 4720 AEWCEFTP True H1975_Epitope_Rep1 981.3902186091699 981.38912993586 23.208 2 -0.7764513147759802 0.2398422090729783 1.0 ['ENSG00000168907|ENST00000397272|PLA2G4F', 'nc|ENSG00000168907|Q68DD2-3|PLA2G4F'] 104454 14275 SQLLKRLRQEN True NCI_RA007_Epitope_Rep2 1383.7946456202296 1383.79354993586 60.188 2 -0.7764551263945512 0.2398422090729783 1.0 ['AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|8|3|sense'] 122534 18728 VGESKFFLCQV True PC9_epitope_Rep1 1255.6270948295899 1255.6254449037901 76.826 3 -0.7764782194963197 0.2398422090729783 1.0 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-5|NCAM1', 'nc|ENSG00000149294|P13591-4|NCAM1', 'nc|ENSG00000149294|P13591-1|NCAM1', 'ENSG00000149294|ENST00000316851|NCAM1', 'nc|ENSG00000149294|P13591-6|NCAM1', 'NCAM1|p.L418Afs*64|1|0.58|ENSG00000149294|chr11:113232176-113232177|-/A|frameshift_variant'] 13046 10215 DLNYYFNWIKT True NCI_RA007_Epitope_Rep2 1475.70851595443 1475.7074099358601 44.323 2 -0.7764841613068486 0.2398422090729783 1.0 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H'] 101737 5914 SLNISEFTQVK True NCI_RA007_Epitope_Rep3 1264.66631678928 1264.6646849037902 30.238 3 -0.7765213504447515 0.23986792507962482 1.0 ['ZNF382|p.F249Sfs*93|1|0.06|ENSG00000161298|chr19:36626639-36626657|GCCTTCATAGAAAAGTCAA/-|frameshift_variant'] 104154 4182 SQEVSHYSPVE True NCI_RA007_Epitope_Rep2 1260.5622456435601 1260.5611499358602 20.906 2 -0.7766283069098693 0.2398866309222925 1.0 ['ENST00000509743.6_1_5:80769553-80770371:-|nuORF'] 94455 21773 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 90.059 2 -0.7766301002463191 0.2398866309222925 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 94538 23483 RRRRWVRLRRR True PC9_epitope_Rep5 1665.0512437124796 1665.0501499358602 95.314 2 -0.7766413950078791 0.2398866309222925 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 67928 7880 LTDATKRNI True PC9_epitope_Rep6 1030.5771078620598 1030.5760099358602 39.729 2 -0.776701414980703 0.23993805788081984 1.0 ['nc|ENSG00000101152|Q9H3Z4-2|DNAJC5', 'ENSG00000101152|ENST00000360864|DNAJC5'] 41896 7617 IDAHVPAATP True NCI_RA007_Epitope_Rep4 990.5134449763399 990.51234993586 35.953 2 -0.7767134629661231 0.23993805788081984 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2'] 129226 16665 VQTLRWQRWQR True NCI_RA007_Epitope_Rep2 1555.84841252859 1555.84730993586 69.556 2 -0.7767433599122241 0.2399532539624571 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 142074 28432 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 118.61 3 -0.7767459660893523 0.2399532539624571 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 142080 28704 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 119.46 3 -0.7767536906780339 0.2399532539624571 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 80191 5809 PFVMWFFKQK True NCI_RA007_Epitope_Rep3 1356.7052855806398 1356.70363490379 29.825 3 -0.7767677152703202 0.2399532539624571 1.0 ['ENSG00000149564|ENST00000278927|ESAM'] 25077 13702 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 57.942 2 -0.7768115032864787 0.2399643566670562 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140617 21388 YRRNFNYRRRR True NCI_RA007_Epitope_Rep2 1655.8981566856698 1655.8970499358602 88.503 2 -0.7768310709074162 0.23997253951096958 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 119962 8400 VDNMACRLAR True NCI_RA007_Epitope_Rep2 1147.5590323531098 1147.55792993586 37.316 2 -0.7768364173127466 0.23997253951096958 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'ARHGEF28|p.D852Kfs*7|1|0.07|ENSG00000214944|chr5:73870196-73870197|-/AA|frameshift_variant', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 117613 12828 TVTEITLI True H1975_Epitope_Rep2 888.5167990212799 888.51570993586 54.451 2 -0.7768509580435383 0.23997253951096958 1.0 ['ENSG00000196099|ENST00000309154|OR6M1', 'OR6M1|p.S5G|1|0.06|ENSG00000196099|chr11:123806337-123806337|T/C|missense_variant'] 91695 24540 RKAGGGGG True H1975_Epitope_Rep3 658.3510711088599 658.35052496793 102.13 1 -0.7768515489900327 0.23997253951096958 1.0 ['ENST00000320225.9_2_16:2314685-2318195:-|nuORF', 'ENST00000301730.12_3_16:2314685-2318093:-|nuORF'] 118973 5030 VAEAQGGK True NCI_RA007_Epitope_Rep2 758.3922672144998 758.39116993586 24.19 2 -0.7768694945743075 0.23997253951096958 1.0 ['ENST00000372386.6_1_9:133355254-133376405:+|nuORF'] 11136 2033 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 10.533 2 -0.776875566755351 0.23997253951096958 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 108885 11553 TAALVWQQV True NCI_RA007_Epitope_Rep3 1014.5498304850599 1014.54872993586 52.574 2 -0.7769585327768528 0.24002746008793072 1.0 ['ENST00000469354.1_1_2:222284760-222285099:-|nuORF'] 42986 15315 IESSPQYRL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 63.921 2 -0.7770478836439866 0.24010808442269774 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000570284.1_1_16:28840745-28842349:+|nuORF', 'ENST00000564284.1_1_16:28841101-28842119:+|nuORF'] 30940 6673 GARHRAWL True NCI_RA007_Epitope_Rep4 965.5307668063298 965.5296699358599 32.289 2 -0.7770614327769053 0.24010808442269774 1.0 ['ENST00000265801.6_2_8:20105580-20105898:-|nuORF'] 104299 19480 SQILKHPSL True PC9_epitope_Rep1 1021.59202965021 1021.59092993586 79.747 2 -0.7771373100011486 0.24015949289438707 1.0 ['ENSG00000116221|ENST00000360840|MRPL37', 'ENST00000490670.1_1_1:54670749-54673061:+|nuORF'] 94438 20026 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 83.009 2 -0.7771545165024214 0.24015949289438707 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 12984 9190 DLLRNNRRPKK True NCI_RA007_Epitope_Rep1 1408.8375134917198 1408.83640993586 39.749 2 -0.7773395399415045 0.24025471381209015 1.0 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'ZSCAN5A|p.G320Afs*11|1|0.15|ENSG00000131848|chr19:56222107-56222107|C/-|frameshift_variant', 'ENST00000592101.1_1_19:56735938-56736358:-|nuORF', 'ENSG00000197213|ENST00000586855|ZSCAN5B', 'ENSG00000204532|ENST00000534327|ZSCAN5C', 'nc|ENSG00000267908|P0CG00|ZSCAN5DP'] 142075 28613 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 119.63 3 -0.7773733515415052 0.24025471381209015 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 3387 6628 AGHRLQRQW True NCI_RA007_Epitope_Rep5 1150.6108080321799 1150.60970993586 32.159 2 -0.7773857544067018 0.2402623008280878 1.0 ['ENST00000293190.9_1_17:72838445-72839279:-|nuORF'] 102167 11404 SLRSLHLDP True PC9_epitope_Rep3 1036.56654317836 1036.5654499358602 48.868 2 -0.7774000669847202 0.2402623008280878 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant'] 120093 10416 VDVSKGSQP True NCI_RA007_Epitope_Rep1 915.4661604307498 915.46506993586 44.5 2 -0.7774143450084078 0.240273396424816 1.0 ['ENSG00000163481|ENST00000295704|RNF25'] 111927 19392 TIPNQLFIN True PC9_epitope_Rep2 1058.5760452329 1058.57494993586 79.969 2 -0.7774753714326106 0.24028098256272454 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 23322 4309 EVQSIRWIFEN True NCI_RA007_Epitope_Rep2 1419.7146639640298 1419.71302490379 21.4 3 -0.7774851279097013 0.24028098256272454 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.M2050Ifs*24|1|0.12|ENSG00000163092|chr2:167248067-167248067|G/-|frameshift_variant', 'XIRP2|p.R1098Ffs*7|1|0.04|ENSG00000163092|chr2:167245207-167245222|TAAGAAAGGGGTGCTT/-|frameshift_variant', 'XIRP2|p.A1392Lfs*11|1|0.36|ENSG00000163092|chr2:167246090-167246090|G/-|frameshift_variant', 'XIRP2|p.G1535Vfs*41|1|0.22|ENSG00000163092|chr2:167246520-167246520|G/-|frameshift_variant', 'XIRP2|p.R1900Efs*5|1|0.1|ENSG00000163092|chr2:167247612-167247612|C/-|frameshift_variant', 'XIRP2|p.G695Vfs*18|1|0.12|ENSG00000163092|chr2:167244000-167244000|G/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 79909 4877 PEPTISWKK True H1975_Epitope_Rep3 1084.59169529704 1084.5905899358602 23.885 2 -0.7775722250627208 0.24032128514056225 1.0 ['nc|ENSG00000169855|Q9Y6N7-6|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-5|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-4|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-3|ROBO1', 'ENSG00000169855|ENST00000464233|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-2|ROBO1'] 83665 10130 PVEPEPTP True PC9_epitope_Rep1 864.42289863644 864.42180993586 43.839 2 -0.7775951705671045 0.24032535996962529 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 22799 6067 EVAAVAVLMC True PC9_epitope_Rep1 1004.5034745395999 1004.50236993586 28.15 2 -0.77760895230837 0.24032535996962529 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 140687 9595 YRVWWSTWRQR True NCI_RA007_Epitope_Rep1 1622.8218634275797 1622.8207699358602 41.319 2 -0.7776249823804477 0.24032535996962529 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1'] 94458 22209 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 91.782 2 -0.777691198079691 0.2403440370321695 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 84709 9924 QDNENVVNEY True H1975_Epitope_Rep2 1222.5102100707 1222.5096749679299 43.161 1 -0.7776915753183467 0.2403440370321695 1.0 ['CON__P02676'] 112892 11628 TLKSRLSQATK True NCI_RA007_Epitope_Rep2 1231.72483472491 1231.72372993586 49.822 2 -0.7777030280257407 0.2403440370321695 1.0 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1'] 84625 1997 QDENDDDDDWN True NCI_RA007_Epitope_Rep1 1379.4385612520698 1379.43746993586 10.51 2 -0.7777583683367553 0.2403551298151339 1.0 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant'] 26689 19103 FIVAWVIGMV True PC9_epitope_Rep4 1133.6307236580499 1133.62962993586 81.571 2 -0.7777703385849767 0.24035569313436322 1.0 ['SLC17A3|p.L341*|1|0.18|ENSG00000124564|chr6:25849820-25849820|A/-|frameshift_variant', 'nc|ENSG00000124564|O00476|SLC17A3', 'ENSG00000124564|ENST00000397060|SLC17A3'] 64417 20336 LPNEMSWLY True NCI_RA007_Epitope_Rep2 1151.53213181559 1151.5315749679298 84.134 1 -0.7777907797616544 0.24035569313436322 1.0 ['ENST00000392708.8_1_11:125490872-125490974:+|nuORF'] 100246 14969 SIYAREPVL True PC9_epitope_Rep2 1046.5760452328998 1046.57494993586 62.836 2 -0.7778097282799536 0.24035569313436322 1.0 ['ENST00000378535.4_1_12:88890181-88890376:-|nuORF'] 126184 15062 VLFSTHTL True PC9_epitope_Rep1 916.50181766348 916.50072993586 62.754 2 -0.7778152429194459 0.24035569313436322 1.0 ['ENSG00000197859|ENST00000651351|ADAMTSL2'] 24973 14868 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 62.423 2 -0.7778565225922254 0.24035625638779384 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25078 13816 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 58.39 2 -0.7778629111765893 0.24035625638779384 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 121944 8050 VFSSGGIL True PC9_epitope_Rep1 778.4225047136199 778.42140993586 35.786 2 -0.7778921179111962 0.24035625638779384 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-2|SLC9B1'] 120857 8818 VELTQQLLRQP True H1975_Epitope_Rep3 1323.7510494727499 1323.74994993586 38.925 2 -0.7778965215449146 0.24035625638779384 1.0 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP'] 58410 6055 LENSKRKF True NCI_RA007_Epitope_Rep1 1020.5716285588 1020.57052993586 27.591 2 -0.778013651126987 0.24042223909361676 1.0 ['ENSG00000125733|ENST00000313244|TRIP10', 'nc|ENSG00000125733|Q15642-5|TRIP10', 'nc|ENSG00000125733|Q15642-4|TRIP10', 'ENST00000595305.5_1_19:6739772-6750443:+|nuORF', 'nc|ENSG00000125733|Q15642-2|TRIP10', 'nc|ENSG00000125733|Q15642-3|TRIP10'] 11135 1900 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 9.8528 2 -0.778023329297412 0.24042223909361676 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 36748 19444 GVKHAPYISI True PC9_epitope_Rep4 1083.6076797143498 1083.60658993586 82.904 2 -0.7780342293971675 0.2404333289533237 1.0 ['nc|ENSG00000249242|B9EJG8-2|TMEM150C', 'ENSG00000249242|ENST00000449862|TMEM150C'] 91026 23761 RFHVLKMLLNL True PC9_epitope_Rep2 1382.8220466683797 1382.8204049037902 96.869 3 -0.7780924772262131 0.24047361812713522 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 67479 4515 LSSSSHGVP True NCI_RA007_Epitope_Rep5 869.42429561877 869.42318993586 24.021 2 -0.7781259775002957 0.2404957953749124 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 23461 21477 EVTPAMQIP True PC9_epitope_Rep3 984.4950180308799 984.49392993586 87.903 2 -0.7781364138447804 0.2404957953749124 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2'] 67534 21236 LSTLPSIGW True PC9_epitope_Rep5 972.5280324113199 972.52692993586 86.734 2 -0.778170941201824 0.24052148269267268 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 34776 13963 GQGDERDMQL True PC9_epitope_Rep5 1147.49278618475 1147.4916899358602 58.731 2 -0.7782166943365014 0.24056176822680955 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000556474.1_1_14:31672823-31675142:-|nuORF'] 19502 12149 ELPGSGKLNK True H1975_Epitope_Rep1 1041.58185888933 1041.5807699358602 51.748 2 -0.7782844497742631 0.24060205258470926 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43'] 68759 10415 LTLELEILENP True H1975_Epitope_Rep3 1282.7020335916598 1282.7009299358601 45.12 2 -0.7783185093041265 0.24065693430656934 1.0 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-2|EIF4G3'] 64238 16779 LPGVSLVSG True PC9_epitope_Rep4 827.47526856247 827.47472496793 72.509 1 -0.778345976556163 0.240708300487577 1.0 ['ENST00000597852.5_1_19:49838763-49839342:+|nuORF'] 117328 7945 TVNQRVWL True PC9_epitope_Rep4 1014.5610638750999 1014.55996993586 38.001 2 -0.7783643997629777 0.240708300487577 1.0 ['ENST00000265801.6_2_8:20106235-20106451:-|nuORF'] 79946 18485 PESLHYFTFPP True PC9_epitope_Rep6 1333.63428838501 1333.63264490379 83.742 3 -0.7784158813062608 0.24077074666082768 1.0 ['L1MB8_dup3477|chr3:193839654-193840532:-|1.5524176989395386|0.3003449133866926|2.37|523.0|36|1|anti-sense'] 113102 14371 TLNVKSEKVYT True H1975_Epitope_Rep3 1280.6976169175598 1280.6965099358601 60.628 2 -0.7784558358349188 0.24077074666082768 1.0 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000484693.1_1_6:30709216-30709507:-|nuORF', 'ENST00000484168.1_1_6:30709216-30709966:-|nuORF'] 21988 10620 ESFTVELSMP True H1975_Epitope_Rep1 1138.5216267015398 1138.5205299358602 45.806 2 -0.7784566719196073 0.24077074666082768 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 42246 10362 IDSYHNHTLK True NCI_RA007_Epitope_Rep2 1226.60438523906 1226.6032899358602 44.897 2 -0.7784639100500627 0.24078182932881792 1.0 ['B3GALT1|p.L152H|1|0.54|ENSG00000172318|chr2:167869494-167869494|T/A|missense_variant'] 100622 5550 SLDDIQQAINR True PC9_epitope_Rep5 1271.64697832703 1271.64532490379 26.353 3 -0.778582636561347 0.24086589691564367 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant', 'DNAH8|p.A1622Qfs*38|1|0.24|ENSG00000124721|chr6:38852742-38852742|G/-|frameshift_variant'] 45133 11287 IPMSFQPVP True H1975_Epitope_Rep2 1014.5208388558998 1014.51974993586 48.463 2 -0.7785865174631741 0.24087697787119752 1.0 ['ENSG00000182771|ENST00000327946|GRID1', 'nc|ENSG00000182771|Q9ULK0-2|GRID1'] 10505 14304 CKKWADIV True PC9_epitope_Rep1 961.5055231449298 961.50442993586 59.845 2 -0.7786956334103439 0.24096860358190655 1.0 ['ENSG00000134897|ENST00000257336|BIVM', 'nc|ENSG00000134897|Q86UB2-2|BIVM', 'ENST00000490317.1_1_13:103473357-103492212:+|nuORF'] 15013 20191 DYKGDATVFFI True PC9_epitope_Rep3 1274.6183039676998 1274.61720993586 82.923 2 -0.7787119612750244 0.24096860358190655 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 94814 25034 RSREKRRRRRR True PC9_epitope_Rep1 1610.9890373787396 1610.9879499358601 101.21 2 -0.7787432177168527 0.24096860358190655 1.0 ['ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant'] 29069 11227 FTHPNWTL True PC9_epitope_Rep5 1014.49231560894 1014.49120993586 48.174 2 -0.778773327731 0.24097968239140588 1.0 ['ENSG00000184005|ENST00000328299|ST6GALNAC3'] 19930 8939 ELVFWRWMVR True H1975_Epitope_Rep3 1420.74379634768 1420.7421449037902 39.38 3 -0.7787773844799004 0.24098724348308376 1.0 ['ENST00000551538.5_1_14:105963624-105963882:+|nuORF', 'ENST00000546536.5_1_14:105957646-105963882:+|nuORF'] 127317 24984 VMGGRRRRRRR True PC9_epitope_Rep3 1454.8701681160198 1454.8690699358601 101.45 2 -0.7787849466538085 0.24098724348308376 1.0 ['ENSG00000229674|ENST00000448797|H2AL3'] 36558 6391 GVGYYSHEVGR True NCI_RA007_Epitope_Rep1 1222.5730851107799 1222.57198993586 28.884 2 -0.778863914474528 0.2410421075676859 1.0 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 59745 5203 LGDRSKEYIRK True NCI_RA007_Epitope_Rep3 1363.7571974823497 1363.75555490379 27.464 3 -0.7788977416092817 0.2410607431623807 1.0 ['ENSG00000163376|ENST00000417314|KBTBD8'] 61777 6403 LLALHSAA True PC9_epitope_Rep5 794.4650382319401 794.46394993586 29.605 2 -0.7789197332834583 0.2410607431623807 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 125119 9874 VIFPMFTFPKK True H1975_Epitope_Rep3 1353.75190141989 1353.7508099358602 43.009 2 -0.7789326698179462 0.2410607431623807 1.0 ['ENST00000532388.5_1_8:70617264-70744908:-|nuORF', 'SLCO5A1|p.M546Cfs*6|1|0.08|ENSG00000137571|chr8:69682330-69682330|T/-|frameshift_variant', 'nc|ENSG00000137571|Q9H2Y9-3|SLCO5A1', 'nc|ENSG00000137571|Q9H2Y9-2|SLCO5A1', 'ENSG00000137571|ENST00000260126|SLCO5A1'] 96617 15836 SAHILGYLI True PC9_epitope_Rep4 985.5596668927699 985.55856993586 68.837 2 -0.7790072930017284 0.24108641398736116 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1'] 79021 7473 PALDLSSPPA True H1975_Epitope_Rep3 966.5022115863 966.50110993586 33.724 2 -0.7790780599889855 0.2411120840630473 1.0 ['ENSG00000179270|ENST00000331664|PCARE'] 57105 7975 LDSSKSVP True PC9_epitope_Rep2 831.43379767331 831.43270993586 36.039 2 -0.7791840649317107 0.24115234745552458 1.0 ['SBF1|p.R777Vfs*41|1|0.13|ENSG00000100241|chr22:50462257-50462272|GCTCCCGAAGTAGGCG/-|frameshift_variant'] 31525 6582 GEDIVITAHV True NCI_RA007_Epitope_Rep1 1052.55022440788 1052.54912993586 29.615 2 -0.7791975246319068 0.24115638316502247 1.0 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 69886 14085 LVIGRHPNP True PC9_epitope_Rep6 1001.57704829241 1001.57594993586 66.05 2 -0.7792004206630385 0.24115638316502247 1.0 ['PDZD2|p.S2678Hfs*5|1|0.32|ENSG00000133401|chr5:32098446-32098446|C/-|frameshift_variant', 'ENSG00000133401|ENST00000438447|PDZD2', 'ENST00000502489.5_1_5:31983264-32077762:+|nuORF', 'ENST00000513184.1_1_5:32059445-32071498:+|nuORF'] 33488 6892 GLAWGAPRSSK True NCI_RA007_Epitope_Rep2 1128.60399131624 1128.60288993586 31.426 2 -0.7792463018476314 0.24115638316502247 1.0 ['nc|ENSG00000050426|Q6P1Q0-3|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-6|LETMD1', 'ENST00000548390.5_1_12:51442139-51443111:+|nuORF', 'ENST00000550715.5_1_12:51442139-51450383:+|nuORF', 'ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1'] 11119 12458 DDDGGSPL True PC9_epitope_Rep3 774.30317742658 774.30208993586 52.944 2 -0.7792774902354482 0.2411639377754429 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 27357 17221 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55750993586 71.882 2 -0.7792953232039382 0.2411639377754429 1.0 ['ENSG00000172531|ENST00000376745|PPP1CA', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 38560 5294 HETPLGYDH True H1975_Epitope_Rep3 1067.46722305991 1067.4661299358602 25.442 2 -0.7793352007130183 0.2411684881735806 1.0 ['PRKCH|p.D645Tfs*5|1|0.3|ENSG00000027075|chr14:61549712-61549712|G/-|frameshift_variant', 'ENSG00000027075|ENST00000332981|PRKCH'] 113343 11483 TLRRGPPP True PC9_epitope_Rep6 892.5242844435597 892.52318993586 55.242 2 -0.7793380169578719 0.2411684881735806 1.0 ['ENSG00000173166|ENST00000319170|RAPH1'] 78838 20866 PAEFPSLE True H1975_Epitope_Rep2 888.4228986364399 888.42180993586 86.396 2 -0.7794197538408725 0.2411684881735806 1.0 ['ENST00000460804.5_1_1:21048287-21050865:-|nuORF', 'nc|ENSG00000189410|Q6ZV89-2|SH2D5', 'ENSG00000189410|ENST00000444387|SH2D5'] 68267 9836 LTEAYEKWREW True NCI_RA007_Epitope_Rep1 1509.7252286477296 1509.7241299358602 42.263 2 -0.7794414740259823 0.2411684881735806 1.0 ['ENSG00000113657|ENST00000343218|DPYSL3', 'nc|ENSG00000113657|Q14195|DPYSL3'] 58399 10254 LENQTFRFDY True H1975_Epitope_Rep1 1331.61461556959 1331.61350993586 44.384 2 -0.7794638110435513 0.2411684881735806 1.0 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 100695 11863 SLDPRLPALQ True H1975_Epitope_Rep1 1108.6240580544797 1108.62296993586 50.63 2 -0.7794985985762322 0.2411684881735806 1.0 ['ENST00000377320.3_1_1:9712717-9713065:-|nuORF'] 102370 7526 SLTDRQPLS True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 34.316 2 -0.7795295181507248 0.2411684881735806 1.0 ['ENSG00000103740|ENST00000258873|ACSBG1'] 3412 5374 AGIRWSYR True NCI_RA007_Epitope_Rep4 1007.53009809999 1007.52900993586 27.239 2 -0.7795555808888246 0.24119063252352813 1.0 ['ENST00000322157.8_1_17:45699289-45699409:+|nuORF'] 59087 7479 LEWRCCPGFR True NCI_RA007_Epitope_Rep3 1265.5797677976898 1265.57866993586 36.539 2 -0.7795616220672492 0.24119063252352813 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 49786 4338 KHFTVAQNER True NCI_RA007_Epitope_Rep2 1228.63126869324 1228.62961490379 21.51 3 -0.7795722205901738 0.24119818492201292 1.0 ['nc|ENSG00000198075|O75897-2|SULT1C4', 'ENSG00000198075|ENST00000272452|SULT1C4'] 82553 17965 PPTLGHIIE True NCI_RA007_Epitope_Rep3 975.53893144819 975.53782993586 78.72 2 -0.7795838603435802 0.24119818492201292 1.0 ['ENST00000273221.8_2_3:12940565-12940730:-|nuORF'] 109428 8273 TDFYIGGVSS True H1975_Epitope_Rep2 1044.4763907612798 1044.47528993586 36.774 2 -0.779620918527725 0.24122083947303152 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 23466 12967 EVTRRALFP True PC9_epitope_Rep6 1087.6138277239497 1087.6127299358602 61.438 2 -0.7797066362256253 0.24122083947303152 1.0 ['nc|ENSG00000123374|P24941-2|CDK2'] 124907 21971 VHPRVGRRRRS True PC9_epitope_Rep6 1374.8181154598199 1374.8164649037901 97.43 3 -0.7797188362704841 0.24122083947303152 1.0 ['ENST00000597790.5_1_19:50879837-50880852:+|nuORF'] 132858 17556 VVLLRARPVI True PC9_epitope_Rep2 1134.76009803482 1134.7584449037902 72.802 3 -0.7797324197461508 0.24122083947303152 1.0 ['ITGA9-SEC13|1|fusion', 'ENSG00000144668|ENST00000264741|ITGA9'] 47809 11028 IYGEKFEDENF True NCI_RA007_Epitope_Rep4 1389.6088614828097 1389.60776993586 49.29 2 -0.7797396602350742 0.24122083947303152 1.0 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 77711 10691 NTLERREKHEK True H1975_Epitope_Rep1 1438.7640737679396 1438.7629699358602 46.082 2 -0.7797706207482563 0.24122083947303152 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 120100 6242 VDYICQYLS True NCI_RA007_Epitope_Rep1 1102.50049733414 1102.49940993586 28.314 2 -0.7798075688959337 0.24123190943043885 1.0 ['nc|ENSG00000140287|P19113-2|HDC', 'ENSG00000140287|ENST00000267845|HDC', 'ENST00000558761.5_1_15:50545740-50557820:-|nuORF', 'ENST00000558679.1_1_15:50546296-50557931:-|nuORF'] 108954 8717 TAEEAEKNP True H1975_Epitope_Rep1 987.4509042894299 987.44980993586 38.458 2 -0.7798492715260503 0.2412429790648479 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'nc|ENSG00000115155|Q9HC10-2|OTOF', 'ENSG00000214814|ENST00000522917|FER1L6'] 141608 7746 YTRQERYRARP True NCI_RA007_Epitope_Rep5 1494.7803925384198 1494.77928993586 36.493 2 -0.7798697789229712 0.2412615977125518 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 96616 16546 SAHILGYLI True PC9_epitope_Rep2 985.5596668927699 985.55856993586 68.882 2 -0.7798852216122704 0.2412615977125518 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1'] 131585 18288 VTLICHAP True NCI_RA007_Epitope_Rep5 852.45275929608 852.45166993586 77.145 2 -0.7798861527532731 0.2412615977125518 1.0 ['ENST00000487143.5_1_2:168811849-168812002:-|nuORF'] 103818 20776 SPWTRFQWRRR True NCI_RA007_Epitope_Rep1 1574.83309681762 1574.83198993586 85.047 2 -0.7799546652635052 0.2412837345003647 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 103442 5220 SPPRRARHGS True NCI_RA007_Epitope_Rep2 1119.6009716244698 1119.5998699358602 24.925 2 -0.7799561971634043 0.2412837345003647 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 117789 8028 TVWAPRLP True NCI_RA007_Epitope_Rep5 938.5337864980999 938.53268993586 37.571 2 -0.7799659094663731 0.241305869996499 1.0 ['TMEM132B|p.G937Afs*35|1|0.09|ENSG00000139364|chr12:125654281-125654281|G/-|frameshift_variant', 'nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-3|TMEM132B'] 6612 13058 APVVRARA True PC9_epitope_Rep1 838.5137197598599 838.51262993586 55.095 2 -0.7800307362743234 0.241305869996499 1.0 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44'] 9562 13439 AWEKIDKLHS True PC9_epitope_Rep5 1225.64552177505 1225.6444299358602 56.71 2 -0.7800929296060913 0.24133152451387976 1.0 ['ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 48108 20331 IYNMETGRWKK True PC9_epitope_Rep3 1424.7234548259196 1424.7223499358602 83.453 2 -0.7802535400852846 0.2413793103448276 1.0 ['ENSG00000165516|ENST00000298307|KLHDC2', 'ENST00000553703.1_1_14:50238344-50241516:+|nuORF', 'nc|ENSG00000165516|Q9Y2U9-2|KLHDC2'] 60984 1791 LIEATVIALTK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 9.4757 3 -0.7802596323311587 0.2413793103448276 1.0 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 42158 10001 IDPHRTVKEK True H1975_Epitope_Rep3 1221.68296991293 1221.68186993586 43.505 2 -0.7802623574598042 0.2413793103448276 1.0 ['ENST00000393910.5_1_17:39983688-39992209:-|nuORF', 'ENST00000469698.5_1_17:39981777-39991902:-|nuORF', 'nc|ENSG00000141698|Q969T7-2|NT5C3B', 'ENSG00000141698|ENST00000435506|NT5C3B'] 58619 7122 LEQVNVIQSH True H1975_Epitope_Rep1 1165.60913626633 1165.60802993586 32.419 2 -0.7802889130755927 0.24141954869670493 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 114359 8766 TPSGKLVSI True NCI_RA007_Epitope_Rep3 900.5280324113199 900.52692993586 41.569 2 -0.7803148681765003 0.2414270919937572 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'nc|ENSG00000152767|Q9Y4F1-3|FARP1'] 119961 7382 VDNHVFNK True H1975_Epitope_Rep3 971.48247920123 971.48138993586 33.374 2 -0.7803257891051547 0.2414270919937572 1.0 ['PIP4K2A|p.L78V|1|0.34|ENSG00000150867|chr10:22609630-22609630|G/C|missense_variant'] 64114 16337 LPEATSAVI True NCI_RA007_Epitope_Rep1 899.4963979298699 899.4958449679301 67.659 1 -0.7804018898997752 0.24146732788798134 1.0 ['nc|ENSG00000154639|P78310-4|CXADR', 'nc|ENSG00000154639|P78310-5|CXADR'] 128120 18440 VPLLGGLL True H1975_Epitope_Rep3 780.5109257952 780.51037496793 77.309 1 -0.780441050262545 0.24147839150537478 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'HERC2|p.G1369Afs*37|1|0.36|ENSG00000128731|chr15:28234182-28234182|C/-|frameshift_variant', 'HERC2|p.A1157G|1|0.12|ENSG00000128731|chr15:28245988-28245988|G/C|missense_variant'] 93896 25071 RRFLIDNVV True NCI_RA007_Epitope_Rep1 1130.6560268890998 1130.65492993586 103.76 2 -0.7804996399840027 0.24150404013885243 1.0 ['RBM19|p.G571V|1|0.22|ENSG00000122965|chr12:113942349-113942349|C/A|missense_variant'] 24981 13466 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 57.071 2 -0.7805758723791684 0.24152968802415298 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140461 2517 YRHRRKYF True PC9_epitope_Rep3 1224.6628436050398 1224.6617499358601 13.881 2 -0.780585973859256 0.24154075024794353 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 84298 6696 PYRQRWAWRTW True H1975_Epitope_Rep1 1604.8112987438797 1604.8096649037902 30.806 3 -0.7806221996098394 0.24156639684970466 1.0 ['ENST00000491400.5_1_6:35254110-35255623:+|nuORF', 'ENST00000469195.5_3_6:35254110-35258154:+|nuORF', 'ENST00000229405.8_1_6:35254110-35258558:+|nuORF'] 133187 23432 VVRRRRRRRRR True NCI_RA007_Epitope_Rep4 1621.0573917220797 1621.0557449037901 101.7 3 -0.7806486334644969 0.24156688882731264 1.0 ['ENST00000356978.8_1_14:90863393-90866410:+|nuORF', 'ENST00000447653.7_1_14:90863393-90865345:+|nuORF'] 112654 9760 TLFNPFLLS True H1975_Epitope_Rep3 1050.57498260374 1050.57388993586 42.565 2 -0.78065327883438 0.24156688882731264 1.0 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP'] 16861 17345 EFFFFFFE True PC9_epitope_Rep3 1158.5062343375798 1158.5045849037901 71.889 3 -0.7806606227085925 0.24156688882731264 1.0 ['ENST00000204726.7_3_12:133346563-133346842:-|nuORF'] 68828 10828 LTLSQSHSL True PC9_epitope_Rep2 984.5240096600401 984.52290993586 46.967 2 -0.7806836263928887 0.24156688882731264 1.0 ['ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 60983 1727 LIEATVIALTK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 9.1401 3 -0.7807053895362986 0.24157794954061543 1.0 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 70867 10391 LYDYFWWE True H1975_Epitope_Rep2 1220.5178616504402 1220.5162049037901 44.98 3 -0.7808285670279236 0.24162571274408295 1.0 ['ENSG00000143418|ENST00000368954|CERS2'] 37070 4087 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 20.613 3 -0.780831388688401 0.24162571274408295 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 133282 18522 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 78.072 2 -0.7808597783621118 0.24162571274408295 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 81621 7045 PLLFYHFWRYF True H1975_Epitope_Rep1 1587.80269112279 1587.8010449037902 32.131 3 -0.7810258820803976 0.24164783084214364 1.0 ['CNIH3|p.E134Rfs*20|1|0.2|ENSG00000143786|chr1:224734650-224734650|G/-|frameshift_variant', 'ENSG00000143786|ENST00000272133|CNIH3'] 123911 9754 VGRSFEPIIK True PC9_epitope_Rep6 1144.6604435631998 1144.65880490379 47.948 3 -0.7810491324574035 0.24164783084214364 1.0 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 136174 20355 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 85.233 2 -0.781103085773199 0.24165888940737285 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 32078 11636 GESPKERHPDS True NCI_RA007_Epitope_Rep1 1237.56872800633 1237.5676299358602 49.233 2 -0.7811379842295211 0.24166642363440172 1.0 ['ENSG00000127903|ENST00000537055|ZNF835', 'ZNF835|p.C224Rfs*23|1|0.29|ENSG00000127903|chr19:56664528-56664529|CA/-|frameshift_variant'] 43740 8622 IHGEEQQP True H1975_Epitope_Rep1 936.4301092752 936.42900993586 38.091 2 -0.7811780386201271 0.24166642363440172 1.0 ['ENSG00000181652|ENST00000639579|ATG9B', 'ATG9B|p.L261Cfs*64|1|0.14|ENSG00000181652|chr7:151023085-151023085|G/-|frameshift_variant', 'nc|ENSG00000181652|Q674R7-3|ATG9B'] 13513 10741 DNMSTFQSI True PC9_epitope_Rep4 1041.44371073401 1041.4426099358602 49.072 2 -0.7811986150160767 0.24167748144475715 1.0 ['ENST00000463753.5_1_3:99396828-99397035:+|nuORF'] 136118 7092 WRNYRMQFFFY True H1975_Epitope_Rep1 1656.7659883442398 1656.76488993586 32.306 2 -0.7812263636676756 0.24168853893263342 1.0 ['ENST00000368324.4_1_1:155852837-155852948:+|nuORF'] 19221 28594 ELIPLIYLE True H1975_Epitope_Rep2 1101.6321631266899 1101.63106993586 119.82 2 -0.7812931097440763 0.2417141773960718 1.0 ['ENSG00000126838|ENST00000261336|PZP', 'nc|ENSG00000126838|P20742-2|PZP'] 114131 12735 TPHPFPAV True PC9_epitope_Rep1 864.4493881678 864.44828993586 53.86 2 -0.781325158004019 0.24172523402642093 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 129136 18149 VQQVITKE True PC9_epitope_Rep1 943.5338460677499 943.53329496793 74.6 1 -0.7813846932038663 0.24175087120715047 1.0 ['nc|ENSG00000136631|Q9NRW7-2|VPS45'] 16271 8007 EEFCCEDC True NCI_RA007_Epitope_Rep2 976.2612552385599 976.2607049679301 35.775 1 -0.7814430877366417 0.24176945732365207 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-1|ZMYM6', 'ENST00000493328.5_1_1:35455862-35480681:-|nuORF'] 20391 5453 EPAKLHLSAE True PC9_epitope_Rep6 1093.57677350889 1093.57566993586 28.902 2 -0.7814520017571408 0.24176945732365207 1.0 ['ENST00000371926.7_1_10:90640020-90661418:+|nuORF', 'ENST00000461650.1_1_10:90640020-90642233:+|nuORF'] 119800 5567 VCRGEPGGGVE True PC9_epitope_Rep1 1058.4814932250597 1058.48097496793 26.243 1 -0.7815107207927214 0.24176945732365207 1.0 ['ENST00000497613.2_1_8:145667249-145667900:-|nuORF'] 98557 7307 SFQDYTGQK True NCI_RA007_Epitope_Rep2 1072.48253877088 1072.4814499358602 33.043 2 -0.7816475289763384 0.2418242524093487 1.0 ['ZCCHC17-SERINC2|1|fusion', 'nc|ENSG00000121766|Q9NP64-2|ZCCHC17', 'nc|ENSG00000121766|Q9NP64-3|ZCCHC17', 'ENSG00000121766|ENST00000344147|ZCCHC17'] 113446 9181 TLSQAIVKV True PC9_epitope_Rep5 957.58588164061 957.58478993586 40.26 2 -0.7818128695656099 0.24184988627748294 1.0 ['ENSG00000163714|ENST00000473835|U2SURP', 'nc|ENSG00000163714|O15042-2|U2SURP'] 7900 6995 ATALASDP True NCI_RA007_Epitope_Rep4 744.36538376032 744.36483496793 33.532 1 -0.7818391198807019 0.24185741361714536 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'nc|ENSG00000067182|P19438-3|TNFRSF1A', 'ENST00000536717.5_1_12:6438480-6440154:-|nuORF', 'nc|ENSG00000067182|P19438-2|TNFRSF1A'] 12515 5349 DKIYYFFREDN True NCI_RA007_Epitope_Rep2 1508.6935941662798 1508.69194490379 25.425 3 -0.7818615850908673 0.24185741361714536 1.0 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 109073 11465 TALEQLFEEHK True H1975_Epitope_Rep3 1343.6721304457099 1343.6710299358601 49.222 2 -0.781877888769866 0.24187599317714636 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3'] 26971 4789 FLEDAKNFY True H1975_Epitope_Rep1 1145.53932537101 1145.53768490379 23.484 3 -0.7819286391196837 0.24187599317714636 1.0 ['ENSG00000165953|ENST00000677451|SERPINA12', 'SERPINA12|p.R148L|1|0.31|ENSG00000165953|chr14:94497955-94497955|C/A|missense_variant', 'SERPINA12|p.R148H|1|0.04|ENSG00000165953|chr14:94497955-94497955|C/T|missense_variant'] 87858 970 QRHQRDEEKA True NCI_RA007_Epitope_Rep5 1295.6330595983898 1295.63140490379 5.5436 3 -0.7819321885449197 0.24187599317714636 1.0 ['ENST00000558505.5_1_15:40582268-40583504:-|nuORF'] 15425 22206 EALARRAL True PC9_epitope_Rep3 898.5348491272599 898.53374993586 90.702 2 -0.7819686185936683 0.24187646690088488 1.0 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-2|SVEP1', 'SVEP1|p.G1214Vfs*13|1|0.12|ENSG00000165124|chr9:110457288-110457288|C/-|frameshift_variant', 'ENST00000467821.1_1_9:113205816-113312285:-|nuORF', 'nc|ENSG00000165124|Q4LDE5-4|SVEP1', 'SVEP1|p.G1542Vfs*10|1|0.12|ENSG00000165124|chr9:110443559-110443559|C/-|frameshift_variant'] 66677 8284 LSLAEKDVT True PC9_epitope_Rep6 974.5284263341399 974.5273299358599 41.476 2 -0.781977031034904 0.24187646690088488 1.0 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'AHNAK2|p.K5101Nfs*13|1|0.13|ENSG00000185567|chr14:104940151-104940151|G/-|frameshift_variant', 'AHNAK2|p.T5409Lfs*2|1|0.29|ENSG00000185567|chr14:104939227-104939227|G/-|frameshift_variant', 'AHNAK2|p.D3458N|1|0.08|ENSG00000185567|chr14:104945079-104945079|C/T|missense_variant', 'AHNAK2|p.P3525Hfs*5|1|0.18|ENSG00000185567|chr14:104944877-104944878|-/T|frameshift_variant'] 112416 15873 TLCRPCPP True PC9_epitope_Rep1 885.4200792688099 885.4189899358599 65.864 2 -0.7819999413171393 0.24187646690088488 1.0 ['ENSG00000054967|ENST00000064780|RELT'] 63961 12297 LNTEVSNPMEY True H1975_Epitope_Rep3 1295.57036779911 1295.5692699358601 52.481 2 -0.7820041942524353 0.24187646690088488 1.0 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 4577 18684 AKPLTHRRHK True NCI_RA007_Epitope_Rep5 1242.7421565549 1242.74050490379 78.688 3 -0.7820865687663714 0.2419211427738503 1.0 ['SPATA17|p.P204H|1|0.1|ENSG00000162814|chr1:217774425-217774425|C/A|missense_variant'] 107698 19469 SVRSQVPAL True PC9_epitope_Rep1 955.5450794577898 955.5439899358599 79.704 2 -0.7821292230635736 0.2419211427738503 1.0 ['ENSG00000175809|ENST00000323684|CBLL2'] 92095 14044 RKWYSPIKGKL True H1975_Epitope_Rep3 1374.8135901596595 1374.8119349037902 59.343 3 -0.7821760157635949 0.2419211427738503 1.0 ['nc|ENSG00000169604|Q9H6X2-5|ANTXR1', 'ENSG00000169604|ENST00000303714|ANTXR1'] 79919 20987 PEQRRKKLQQR True H1975_Epitope_Rep2 1465.8589772122898 1465.85734490379 86.875 3 -0.7821822344624122 0.2419211427738503 1.0 ['nc|ENSG00000137942|Q5T0N5-3|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-4|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-2|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-5|FNBP1L', 'ENSG00000137942|ENST00000271234|FNBP1L'] 3752 7704 AGSRCPER True PC9_epitope_Rep5 874.4079343619799 874.40682993586 34.576 2 -0.7822043105112652 0.2419211427738503 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 124299 9052 VGTNWCIP True PC9_epitope_Rep2 888.4163737873599 888.41526993586 40.165 2 -0.7822125136336157 0.2419211427738503 1.0 ['ENST00000345097.8_1_14:89626295-89626385:-|nuORF'] 104740 12796 SQVKPFVP True PC9_epitope_Rep3 900.5069030439198 900.50580993586 54.24 2 -0.7822127743220535 0.2419211427738503 1.0 ['ENST00000308982.11_1_3:128631530-128631665:+|nuORF'] 102151 24490 SLRREKWRGRR True PC9_epitope_Rep2 1498.8705449554998 1498.86944993586 99.791 2 -0.7822781319587148 0.2419211427738503 1.0 ['ENST00000300452.7_1_9:131096069-131096330:+|nuORF'] 128883 7179 VQESGDRHQLR True H1975_Epitope_Rep3 1323.66435972667 1323.6632699358602 32.589 2 -0.7823526415080235 0.24195076447696368 1.0 ['ENST00000576921.1_1_16:3073594-3073723:-|nuORF'] 103608 7107 SPSVLPPSL True PC9_epitope_Rep4 895.50148331031 895.50038993586 34.606 2 -0.7823655547930871 0.24195076447696368 1.0 ['ENST00000434116.6_1_15:65916409-65944223:+|nuORF', 'nc|ENSG00000074621|O60721-3|SLC24A1', 'nc|ENSG00000074621|O60721-2|SLC24A1', 'ENSG00000074621|ENST00000261892|SLC24A1'] 45413 23405 IQFRWWQPYHS True NCI_RA007_Epitope_Rep2 1546.74696715182 1546.7458699358601 97.932 2 -0.7823663329336276 0.24195076447696368 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN', 'RELN|p.T1573Nfs*21|1|0.2|ENSG00000189056|chr7:103566630-103566631|-/T|frameshift_variant', 'RELN|p.N1689*|1|0.1|ENSG00000189056|chr7:103565423-103565424|-/TA|frameshift_variant', 'RELN|p.V1697Cfs*59|1|0.42|ENSG00000189056|chr7:103565399-103565400|-/A|frameshift_variant'] 106622 24774 STRKVIVS True PC9_epitope_Rep4 888.5392658013599 888.5387149679301 103.8 1 -0.7823854072934415 0.24195076447696368 1.0 ['GPR139|p.R144S|1|0.3|ENSG00000180269|chr16:20032367-20032367|G/T|missense_variant'] 3045 20764 AFRRRRWRRR True NCI_RA007_Epitope_Rep5 1514.9031824964597 1514.9015249037902 86.843 3 -0.782453316237328 0.24196181314677162 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 4929 8590 ALGAIETAPRP True NCI_RA007_Epitope_Rep1 1094.6084079903399 1094.60730993586 37.417 2 -0.7824797776094012 0.2419698029614084 1.0 ['ENSG00000167194|ENST00000681219|C16orf92'] 132425 23701 VVARTLGG True NCI_RA007_Epitope_Rep5 771.4602872046698 771.4597349679301 98.505 1 -0.7824831094914044 0.2419698029614084 1.0 ['IRS4|p.G575Dfs*36|1|0.72|ENSG00000133124|chrX:108734621-108734621|C/-|frameshift_variant'] 42252 19169 IDTEEFFVKYK True H1975_Epitope_Rep3 1417.71293262853 1417.7118299358601 80.383 2 -0.7825153189392532 0.2419698029614084 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 123899 16887 VGRRRTSR True NCI_RA007_Epitope_Rep3 986.5845932843399 986.58404496793 74.296 1 -0.7825357449830762 0.2419698029614084 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 22814 6033 EVAAVAVLMC True PC9_epitope_Rep5 1004.5034745395999 1004.50236993586 28.198 2 -0.7825387078118786 0.2419698029614084 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 1198 9151 AEAVEQRLAAQ True H1975_Epitope_Rep1 1184.61494992276 1184.6138499358601 40.105 2 -0.7825450820521017 0.2419698029614084 1.0 ['ENST00000578774.1_1_17:38517261-38520175:+|nuORF'] 64774 20096 LQALIQCGQP True PC9_epitope_Rep1 1069.55901526977 1069.5579099358602 82.127 2 -0.7825487353476094 0.24198085022662022 1.0 ['CON__ENSEMBL:ENSBTAP00000032840'] 41538 19413 HYPYFLIV True PC9_epitope_Rep6 1050.5538532363398 1050.5527499358602 87.328 2 -0.7825647065284969 0.24198484406878462 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 3607 10346 AGPAGQTDSHL True H1975_Epitope_Rep3 1052.48868678048 1052.4875899358601 44.85 2 -0.7825887729518554 0.24198484406878462 1.0 ['ENST00000517791.1_1_5:149785806-149786884:-|nuORF'] 73626 6714 MWNWMVSL True PC9_epitope_Rep3 1065.47759414493 1065.4764899358602 30.847 2 -0.782588854515085 0.24198484406878462 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 45256 9581 IPVDSAVAV True NCI_RA007_Epitope_Rep3 869.4858332461699 869.48528496793 44.771 1 -0.7825999495065981 0.24199236396490922 1.0 ['ENST00000525183.1_1_11:75848287-75852454:+|nuORF', 'nc|ENSG00000198382|Q9P2Y5-2|UVRAG', 'POLB-UVRAG|1|fusion', 'ENSG00000198382|ENST00000356136|UVRAG'] 123903 20700 VGRRRTSR True PC9_epitope_Rep6 986.5845932843399 986.58404496793 92.385 1 -0.7826032186326544 0.24199236396490922 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 30966 15825 GARVRREL True NCI_RA007_Epitope_Rep4 955.5675462378698 955.56644993586 68.729 2 -0.7826243583352276 0.2420034099354444 1.0 ['ENSG00000058453|ENST00000375541|CROCC', 'ENST00000494191.6_1_1:17270607-17280126:+|nuORF'] 19706 5589 ELRQDYRRYLT True H1975_Epitope_Rep1 1511.7844748593498 1511.78281490379 26.564 3 -0.7826619709559246 0.24201092896174864 1.0 ['nc|ENSG00000104218|Q1MSJ5-1|CSPP1', 'ENSG00000104218|ENST00000678616|CSPP1', 'nc|ENSG00000104218|Q1MSJ5|CSPP1'] 61832 5168 LLAVSHVG True NCI_RA007_Epitope_Rep4 794.46503823194 794.46394993586 26.405 2 -0.7826665323185188 0.24201092896174864 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 61794 12031 LLAQQLVSP True PC9_epitope_Rep5 967.5702315764698 967.56912993586 51.271 2 -0.782721856893812 0.24202197417888263 1.0 ['ENSG00000100294|ENST00000290429|MCAT'] 59783 19952 LGEIGGIIGT True PC9_epitope_Rep4 928.5229470308799 928.52184993586 84.88 2 -0.7827403368368299 0.24203301907412533 1.0 ['ENSG00000168280|ENST00000435030|KIF5C', 'nc|ENSG00000168280|O60282-2|KIF5C', 'ENST00000460377.1_2:149835462-149853923:+|nuORF'] 75066 9363 NHVANSPVSI True PC9_epitope_Rep2 1036.53015766964 1036.5290699358602 41.349 2 -0.7827477657781191 0.24204406364749081 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 32939 13213 GIAQGQMTVL True PC9_epitope_Rep5 1016.5324661687599 1016.53136993586 55.831 2 -0.7827546394085216 0.24205510789899315 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 129548 21146 VRLIHLRLK True PC9_epitope_Rep3 1146.7713314248601 1146.76969490379 86.624 3 -0.7828019796703195 0.24209529360338045 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 92964 6948 RPKCVCIA True H1975_Epitope_Rep1 888.4673638143998 888.4662699358599 31.765 2 -0.7828853259866303 0.2421209074616427 1.0 ['ENST00000535164.5_1_16:19612936-19627472:+|nuORF'] 98397 22735 SFCWKRKMEWW True PC9_epitope_Rep3 1585.7322456878098 1585.73114993586 92.715 2 -0.7829356005629935 0.24213946440539674 1.0 ['ENSG00000136206|ENST00000693451|SPDYE1', 'nc|ENSG00000136206|Q8NFV5|SPDYE1', 'ENSG00000205238|ENST00000691607|SPDYE2', 'ENSG00000173678|ENST00000507450|SPDYE2B', 'SPDYE5|p.M345*|1|0.09|ENSG00000170092|chr7:75501637-75501637|C/-|frameshift_variant', 'ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000260097|ENST00000563237|SPDYE6'] 31259 16475 GDEPGRPRSR True PC9_epitope_Rep2 1125.56391740941 1125.56282993586 68.612 2 -0.7829417601114748 0.24213946440539674 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 109205 2698 TAQSQVQMKK True NCI_RA007_Epitope_Rep2 1147.6019427109097 1147.6003049037902 14.721 3 -0.7829419557338682 0.24213946440539674 1.0 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 23233 6463 EVNEDIQP True NCI_RA007_Epitope_Rep1 942.42944056886 942.42834993586 29.162 2 -0.7830369878932024 0.24216553271463745 1.0 ['nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1', 'ENST00000505068.5_1_4:71691792-71705589:-|nuORF'] 123864 16554 VGRRAAKA True NCI_RA007_Epitope_Rep2 827.5089687325898 827.5084249679301 69.12 1 -0.7830448545170322 0.24216553271463745 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 97363 10200 SEDKKRVRFTK True NCI_RA007_Epitope_Rep2 1392.7837465833597 1392.78264993586 44.263 2 -0.7830497210642039 0.24216553271463745 1.0 ['ENSG00000250374|ENST00000503032|TRIM75'] 89773 24767 RAIKGFGGIG True PC9_epitope_Rep3 974.5661492555398 974.56504993586 100.64 2 -0.78306045769724 0.24216553271463745 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 64992 5588 LQHHQIIQQ True NCI_RA007_Epitope_Rep3 1143.61489035311 1143.61378993586 28.973 2 -0.7830623644188468 0.24216553271463745 1.0 ['ENSG00000136937|ENST00000375147|NCBP1'] 18638 14767 EKVLDEFSKQ True PC9_epitope_Rep2 1221.62411762413 1221.6230299358601 62.067 2 -0.7830829178597847 0.24217304526449207 1.0 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6'] 65150 5913 LQNRSHGK True NCI_RA007_Epitope_Rep1 938.50461162814 938.50350993586 27.051 2 -0.7830901501531425 0.24217304526449207 1.0 ['ENSG00000069943|ENST00000164305|PIGB', 'ENST00000569909.1_1_15:55611448-55611893:+|nuORF', 'ENST00000566072.1_1_15:55611475-55617022:+|nuORF'] 123156 7453 VGKRVPRN True NCI_RA007_Epitope_Rep4 924.5617325814399 924.56062993586 35.311 2 -0.7830962063598004 0.24218408554529297 1.0 ['ENST00000262544.6_1_20:18488293-18488443:+|nuORF'] 112630 12360 TLFCQDGRLL True PC9_epitope_Rep4 1164.59612905448 1164.59449490379 55.349 3 -0.7831289220581203 0.24220969363227132 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 110861 8904 TGRGRGPVVP True NCI_RA007_Epitope_Rep1 994.5672118846998 994.56610993586 38.634 2 -0.7832479569184474 0.24227547527132348 1.0 ['ENST00000557986.5_1_15:60685624-60688481:-|nuORF'] 113559 9557 TLTTSPRLP True H1975_Epitope_Rep3 984.5603951687599 984.55928993586 41.77 2 -0.7832485077506584 0.24227547527132348 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 139873 19189 YPQVMKDYI True PC9_epitope_Rep6 1155.5634319438698 1155.5623299358601 86.462 2 -0.7833081615123957 0.24230108090784605 1.0 ['ENSG00000188501|ENST00000695545|LCTL', 'nc|ENSG00000188501|Q6UWM7-2|LCTL'] 38449 8499 HENQLAIWNLK True NCI_RA007_Epitope_Rep2 1364.7200836976397 1364.71898993586 37.702 2 -0.7833463257304508 0.2423085887425708 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 61770 5364 LLALHSAA True NCI_RA007_Epitope_Rep1 794.4650382319401 794.46394993586 24.943 2 -0.7833498227247327 0.2423085887425708 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 66211 12625 LSETESYNLS True PC9_epitope_Rep4 1141.51389846881 1141.51280993586 56.4 2 -0.7833674441761738 0.2423196259231744 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 102258 13742 SLSIQTANP True PC9_epitope_Rep3 929.48181049489 929.48070993586 57.94 2 -0.783417255219727 0.2423306627822287 1.0 ['ENSG00000168509|ENST00000336751|HJV', 'nc|ENSG00000168509|Q6ZVN8-2|HJV', 'nc|ENSG00000168509|Q6ZVN8-3|HJV'] 135594 8604 WLEILNKIENK True NCI_RA007_Epitope_Rep4 1398.7871006282996 1398.78544490379 39.878 3 -0.7834322509209439 0.24234169931974772 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28', 'ENST00000510312.6_1_5:73178320-73193923:+|nuORF'] 56245 20243 LCQWRRRQRRR True NCI_RA007_Epitope_Rep1 1612.9069475475599 1612.90531490379 82.945 3 -0.7834526422388247 0.24234920542438057 1.0 ['ENST00000370332.5_1_1:92949124-92949509:-|nuORF'] 136677 4722 WWWIWWQWWK True NCI_RA007_Epitope_Rep2 1689.8033598291297 1689.8017049037903 22.996 3 -0.7834663215573048 0.24234920542438057 1.0 ['chr12:54282841-54283827|531|24.4|0.0|21.22|+|1|HNRNPA1,HNRNPA1|1'] 79675 5660 PDSDDEILEHT True H1975_Epitope_Rep2 1269.5360904653699 1269.53498993586 26.768 2 -0.7835353915938724 0.24238584225475202 1.0 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 111670 13806 TIENFHVV True PC9_epitope_Rep4 957.49198125577 957.49088993586 61.0 2 -0.7836178542726419 0.24238584225475202 1.0 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 69196 21465 LTSIGNQHTY True PC9_epitope_Rep1 1132.55128703704 1132.55018993586 87.407 2 -0.7836779353491146 0.242408796330008 1.0 ['ENSG00000169306|ENST00000378993|IL1RAPL1'] 126001 19375 VLDRESLYTK True H1975_Epitope_Rep3 1222.65575210558 1222.65464993586 81.211 2 -0.7837146769666656 0.242408796330008 1.0 ['TOP1-CDH4|1|fusion', 'CDH4|p.I691Mfs*56|1|0.25|ENSG00000179242|chr20:61929676-61929676|C/-|frameshift_variant', 'nc|ENSG00000179242|P55283-2|CDH4', 'ENSG00000179242|ENST00000614565|CDH4'] 20017 13045 ELYMRRLRSTK True NCI_RA007_Epitope_Rep1 1451.8031021289496 1451.80200993586 54.734 2 -0.7837242542261689 0.242408796330008 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.A1711Lfs*3|1|0.11|ENSG00000042781|chr1:216084735-216084735|G/-|frameshift_variant'] 56244 19463 LCQWRRRQRRR True H1975_Epitope_Rep3 1612.9069475475599 1612.90531490379 81.57 3 -0.7837291139052579 0.242408796330008 1.0 ['ENST00000370332.5_1_1:92949124-92949509:-|nuORF'] 28385 16459 FRWWRRRWNPR True H1975_Epitope_Rep3 1714.9181638542595 1714.9170699358601 68.797 2 -0.7837361130435563 0.242408796330008 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 123265 10671 VGLKNLSVQ True PC9_epitope_Rep5 956.5654805492 956.56438993586 46.035 2 -0.7837947452222606 0.242408796330008 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2'] 126040 9592 VLEDNSQR True H1975_Epitope_Rep1 959.4672230599099 959.46612993586 41.821 2 -0.7838354691500292 0.242408796330008 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 84158 9477 PYHAYYRHKVS True H1975_Epitope_Rep1 1419.70476798667 1419.70366993586 41.37 2 -0.7838505331100397 0.242408796330008 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1', 'ENST00000463818.1_1_22:30742246-30752805:-|nuORF'] 34468 24497 GPKRQNRILLL True PC9_epitope_Rep4 1306.8197381692598 1306.81864993586 102.71 2 -0.7838888079934664 0.242408796330008 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 138995 24553 YKRRQQLRRTR True PC9_epitope_Rep2 1559.9233088043497 1559.92165490379 100.07 3 -0.7839005959499601 0.242408796330008 1.0 ['MYO3A|p.K1368Rfs*19|1|0.31|ENSG00000095777|chr10:26174366-26174366|A/-|frameshift_variant'] 20192 10798 ENIAVGLATEK True H1975_Epitope_Rep3 1143.6135529404298 1143.6129749679299 46.613 1 -0.7839286923919643 0.24243439256691812 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1', 'ENSG00000140326|ENST00000356231|CDAN1'] 16186 20526 EEEDSLSPLQI True PC9_epitope_Rep1 1258.5928770654998 1258.59178993586 83.765 2 -0.7839341916054298 0.24244542502220864 1.0 ['MAGEC1|p.G685E|1|0.55|ENSG00000155495|chrX:141907458-141907458|G/A|missense_variant'] 25109 13777 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 61.521 2 -0.7842180602873114 0.24258752257237723 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 141451 17881 YTGEGQWEV True PC9_epitope_Rep1 1067.45598966987 1067.4554749679298 73.572 1 -0.7842301156545659 0.24259148694499863 1.0 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 81963 21324 PLTLDELFG True PC9_epitope_Rep2 1003.52261267771 1003.52150993586 87.487 2 -0.784296151678562 0.24259148694499863 1.0 ['ENST00000409260.5_1_2:220110626-220111251:+|nuORF', 'ENST00000486813.1_1_2:220110626-220111851:+|nuORF', 'ENST00000409516.7_1_2:220110217-220112141:+|nuORF', 'ENST00000491697.1_1_2:220110217-220110827:+|nuORF', 'ENST00000409638.7_1_2:220110217-220111398:+|nuORF', 'ENST00000496443.5_1_2:220110461-220110827:+|nuORF', 'ENST00000475696.5_1_2:220110350-220111398:+|nuORF'] 25079 14520 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 61.142 2 -0.7843215596444127 0.24259148694499863 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 82170 17962 PNQDKKKKKKE True NCI_RA007_Epitope_Rep4 1369.80414767477 1369.8030499358601 77.711 2 -0.7844232810606379 0.24266076421248836 1.0 ['ENST00000360264.7_1_7:101893260-101893380:+|nuORF'] 17805 8469 EHSRPPRLR True PC9_epitope_Rep1 1146.6370227800198 1146.63538490379 37.411 3 -0.784469770785222 0.24267264600107744 1.0 ['ENST00000396465.5_1_8:74206146-74206593:-|nuORF'] 123252 18905 VGLIQQQKTFR True NCI_RA007_Epitope_Rep3 1316.75646920636 1316.75587496793 82.651 1 -0.78449092794889 0.24267264600107744 1.0 ['ENST00000506227.2_1_4:83501272-83501506:-|nuORF'] 4893 11602 ALEVTKLA True PC9_epitope_Rep6 843.5065686907499 843.50546993586 55.745 2 -0.7844970278904052 0.24267264600107744 1.0 ['ENSG00000196139|ENST00000380554|AKR1C3', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|156|17.51|0.18|6.59|+|ENST00000602997|AKR1C3,AKR1C3', 'ENST00000480697.6_1_10:5136636-5139787:+|nuORF'] 5650 3846 APAAPTRPM True NCI_RA007_Epitope_Rep4 910.4694719893799 910.46836993586 20.994 2 -0.7845090729130373 0.24267264600107744 1.0 ['RAB40A|p.G5Afs*21|1|0.63|ENSG00000172476|chrX:103500743-103500743|C/-|frameshift_variant'] 79289 23506 PAPSRQPRRPR True PC9_epitope_Rep2 1316.75378386776 1316.7532749679299 95.89 1 -0.784521530111317 0.24267264600107744 1.0 ['ENST00000328194.7_2_11:9286719-9286821:-|nuORF'] 12278 22746 DILKWFYVLI True PC9_epitope_Rep1 1308.74819593844 1308.74708993586 92.299 2 -0.7845713640776333 0.24267264600107744 1.0 ['ENST00000522522.5_1_1:243375035-243388582:-|nuORF'] 16781 12089 EETWSLIP True NCI_RA007_Epitope_Rep4 973.4756624852898 973.47511496793 53.499 1 -0.7845746502138944 0.24267264600107744 1.0 ['nc|ENSG00000068137|Q7Z736-4|PLEKHH3', 'ENST00000456950.6_1_17:40821512-40828020:-|nuORF', 'nc|ENSG00000068137|Q7Z736-2|PLEKHH3', 'ENST00000591490.5_1_17:40821740-40828722:-|nuORF', 'ENST00000592974.5_1_17:40825317-40826415:-|nuORF', 'nc|ENSG00000068137|Q7Z736-3|PLEKHH3', 'ENSG00000068137|ENST00000591022|PLEKHH3'] 112484 7241 TLDLQEQL True NCI_RA007_Epitope_Rep4 958.49712620586 958.49602993586 34.487 2 -0.7845855869273013 0.24267264600107744 1.0 ['ENSG00000130307|ENST00000252597|USHBP1'] 115917 7781 TSFSPPPPP True H1975_Epitope_Rep2 925.4545331178898 925.4539849679301 34.876 1 -0.7846237835146774 0.24267264600107744 1.0 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 126751 25628 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 103.6 3 -0.7846808984425891 0.2427127922891005 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 130560 11109 VSRKMTNFIMK True PC9_epitope_Rep3 1353.7260976782102 1353.72445490379 47.728 3 -0.7847254398096414 0.24274940306330442 1.0 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4'] 16281 4811 EEFLQQYNHYK True NCI_RA007_Epitope_Rep2 1497.68884313901 1497.68719490379 23.34 3 -0.7847381622444081 0.24274940306330442 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant'] 64222 21833 LPGTLTLVT True PC9_epitope_Rep5 913.54843350273 913.54732993586 89.012 2 -0.7847688533028829 0.242760428041057 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF', 'ENST00000561695.1_1_16:2128976-2129273:+|nuORF'] 18548 6696 EKLPEHTK True NCI_RA007_Epitope_Rep3 980.5290950404801 980.52798993586 33.42 2 -0.7848030355323852 0.24280057071310018 1.0 ['nc|ENSG00000164509|Q8NI17-6|IL31RA', 'nc|ENSG00000164509|Q8NI17|IL31RA', 'nc|ENSG00000164509|Q8NI17-12|IL31RA', 'ENSG00000164509|ENST00000652347|IL31RA'] 84167 16283 PYILVYAND True PC9_epitope_Rep3 1066.53351171458 1066.5324099358602 67.769 2 -0.7848139597723408 0.24280452474195285 1.0 ['GDF10|p.V453Sfs*12|1|0.21|ENSG00000266524|chr10:47312709-47312709|G/-|frameshift_variant', 'ENSG00000152785|ENST00000282701|BMP3', 'ENSG00000266524|ENST00000580279|GDF10'] 34252 17559 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 74.329 2 -0.7848490552862646 0.24280452474195285 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 75199 16132 NIDLLEGITGF True NCI_RA007_Epitope_Rep5 1190.6183039677 1190.61720993586 68.786 2 -0.784851416401572 0.24280452474195285 1.0 ['EIF3K|p.M125I|1|0.12|ENSG00000178982|chr19:38632450-38632450|G/T|missense_variant'] 102876 3966 SPAEPIENR True NCI_RA007_Epitope_Rep4 1011.49852318819 1011.4974299358599 21.494 2 -0.7848675408929034 0.2428120132186167 1.0 ['ENSG00000168631|ENST00000462446|MUCL3'] 66355 7529 LSGEQNEQVK True NCI_RA007_Epitope_Rep2 1130.5567663402999 1130.5556699358601 33.912 2 -0.7848679896258401 0.2428120132186167 1.0 ['CON__ENSEMBL:ENSBTAP00000032840'] 33062 11185 GILQQKNAV True PC9_epitope_Rep3 969.5607295219299 969.55962993586 48.027 2 -0.78496250619713 0.24283405878328215 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 77806 7073 NTVSTSLGHSK True H1975_Epitope_Rep2 1129.57275075761 1129.57111490379 32.135 3 -0.7850011730694101 0.24283405878328215 1.0 ['ENSG00000181072|ENST00000680005|CHRM2'] 58354 17913 LENELDEDM True PC9_epitope_Rep5 1106.44377030366 1106.44266993586 73.92 2 -0.785025521815866 0.24284508108422861 1.0 ['ENST00000277795.8_1_10:70048686-70066625:-|nuORF', 'PBLD|p.Q186Efs*10|1|0.14|ENSG00000108187|chr10:68288602-68288618|CCTGTGTTTTCAACTTG/-|frameshift_variant', 'nc|ENSG00000108187|P30039-2|PBLD', 'ENSG00000108187|ENST00000358769|PBLD'] 89775 24800 RAIKGFGGIG True PC9_epitope_Rep5 974.5661492555398 974.56504993586 100.54 2 -0.7850639382032053 0.2428561030642696 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 136673 7244 WWTRCAWRPRR True H1975_Epitope_Rep1 1572.7996885143598 1572.79804490379 32.874 3 -0.7851365930142478 0.24285651901774408 1.0 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant'] 116718 9683 TVDGPVQL True PC9_epitope_Rep2 827.43888305375 827.43778993586 42.585 2 -0.7851391627503773 0.24285651901774408 1.0 ['nc|ENSG00000154134|Q96MS0-2|ROBO3', 'ENSG00000154134|ENST00000397801|ROBO3'] 11568 2766 DFWFLNNVGP True H1975_Epitope_Rep2 1207.56620882519 1207.5651099358602 14.668 2 -0.7851432332466134 0.24285651901774408 1.0 ['ENSG00000157856|ENST00000288710|DRC1'] 41423 13235 HYHKEYRQRYR True H1975_Epitope_Rep3 1634.8178406763 1634.8167499358601 56.164 2 -0.7851812729958275 0.24285651901774408 1.0 ['ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 78727 5881 PAAAPAWP True PC9_epitope_Rep5 779.39662431895 779.3955299358599 27.612 2 -0.7852659760017451 0.2428895810893424 1.0 ['ENST00000456291.1_3_9:123638279-123638699:-|nuORF'] 55963 19450 LARRWPLARCA True NCI_RA007_Epitope_Rep5 1311.7346286463098 1311.73297490379 81.702 3 -0.7852769188988741 0.2428895810893424 1.0 ['ENST00000373034.8_1_X:99665079-99665142:-|nuORF'] 81628 6351 PLLGTCM[Oxidation]SCK True H1975_Epitope_Rep3 1067.4813595764701 1067.4807749679298 29.42 1 -0.7852872524059957 0.2428895810893424 1.0 ['nc|ENSG00000240505|O14836-3|TNFRSF13B', 'ENST00000581616.2_1_17:16844708-16875389:-|nuORF', 'ENSG00000240505|ENST00000261652|TNFRSF13B'] 64564 18489 LPSERSKIL True PC9_epitope_Rep4 1041.61824439805 1041.6171499358602 79.191 2 -0.7853480270165801 0.24289353031074887 1.0 ['ENST00000441560.6_1_14:51099028-51099193:+|nuORF'] 95248 24308 RVLRRYRLQRR True PC9_epitope_Rep4 1570.97567873038 1570.9745899358602 101.98 2 -0.7853554770150893 0.24289353031074887 1.0 ['ENSG00000177971|ENST00000403490|IMP3'] 13623 11533 DPKHLPPLP True PC9_epitope_Rep1 1012.5705659296399 1012.56946993586 49.241 2 -0.7853601545376124 0.24289353031074887 1.0 ['ENST00000478246.1_1_9:35562293-35562500:-|nuORF', 'ENSG00000215187|ENST00000399742|FAM166B'] 109187 5340 TAPDAAADP True H1975_Epitope_Rep3 827.3661120363099 827.36556496793 25.61 1 -0.7854023495237284 0.24290101445267587 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B'] 122919 8317 VGHRRKERP True NCI_RA007_Epitope_Rep3 1133.6530071973298 1133.65135490379 39.833 3 -0.7854359238810863 0.24290101445267587 1.0 ['ENST00000493001.1_1_2:224759053-224760271:-|nuORF'] 137394 6075 YDYFQIKMQNY True H1975_Epitope_Rep3 1511.67550157399 1511.67440993586 28.38 2 -0.785504738674787 0.2429340707320623 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9', 'SAMD9|p.T529Hfs*5|1|0.05|ENSG00000205413|chr7:93104516-93104516|G/-|frameshift_variant'] 62350 15382 LLGLKKLSFYY True NCI_RA007_Epitope_Rep3 1343.78530972315 1343.7842099358602 68.064 2 -0.7855098851388644 0.2429340707320623 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 72510 11263 MLEWQFQK True H1975_Epitope_Rep1 1108.5375515491999 1108.5364499358602 48.299 2 -0.7855212872621746 0.2429340707320623 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 57682 11846 LEEGGNKDEDV True PC9_epitope_Rep3 1203.52552578167 1203.52442993586 50.585 2 -0.7855898365355379 0.2429415531493771 1.0 ['ENSG00000168703|ENST00000372785|WFDC12'] 125690 9618 VKNKVKKHKK True NCI_RA007_Epitope_Rep5 1235.8190098932698 1235.81737490379 43.638 3 -0.7856480119417562 0.2429415531493771 1.0 ['nc|ENSG00000092853|Q9HAW4-2|CLSPN', 'nc|ENSG00000092853|Q9HAW4-3|CLSPN', 'ENSG00000092853|ENST00000318121|CLSPN'] 93977 19907 RRKDERRKEKR True NCI_RA007_Epitope_Rep3 1555.9131380434699 1555.91149490379 86.76 3 -0.7857123660316305 0.24296712412498364 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 23057 8292 EVHVDPVGP True H1975_Epitope_Rep2 947.4712458111898 947.47014993586 36.846 2 -0.7857837804698682 0.24300724743138225 1.0 ['ENSG00000105696|ENST00000262817|TMEM59L', 'ENST00000598660.1_1_19:18723732-18729158:+|nuORF'] 58316 4879 LEMGGLSPAGD True PC9_epitope_Rep3 1045.47501086229 1045.47390993586 23.867 2 -0.7858347640028361 0.24303281670668703 1.0 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'ENST00000490265.5_1_X:13771424-13787224:+|nuORF'] 67159 6274 LSQTHSLNN True PC9_epitope_Rep1 1012.4937721609201 1012.49266993586 28.946 2 -0.7858764367469722 0.24304383258629722 1.0 ['ENSG00000228083|ENST00000380222|IFNA14'] 25127 12923 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 56.799 2 -0.7859303911602914 0.24305131115573794 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 31253 11483 GDENINVLDL True NCI_RA007_Epitope_Rep1 1100.5349682665599 1100.53437496793 48.632 1 -0.7859363713945479 0.24305131115573794 1.0 ['ENSG00000174145|ENST00000309447|NWD2'] 93462 17359 RQIDFPLRI True PC9_epitope_Rep4 1156.6716769532397 1156.6700249037901 74.775 3 -0.7859741447149591 0.24306232628530683 1.0 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'IGF2BP2|p.A393Lfs*38|1|0.5|ENSG00000073792|chr3:185672565-185672565|G/-|frameshift_variant'] 52712 14386 KMERLFDLYFY True H1975_Epitope_Rep2 1523.7482725914301 1523.74716993586 60.486 2 -0.7860331982039059 0.24306273009036275 1.0 ['ENSG00000214237|ENST00000465419|MINDY4B'] 81618 18430 PLLERRRGP True PC9_epitope_Rep6 1092.651610215 1092.65050993586 83.534 2 -0.7860346641477401 0.24306273009036275 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1'] 25080 14706 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 61.873 2 -0.7860371381436783 0.24306273009036275 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79685 16781 PDSFNIPGSS True PC9_epitope_Rep3 1019.45598966987 1019.4554749679301 69.694 1 -0.7860411378738883 0.24306273009036275 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 19558 16391 ELQDTLEIA True PC9_epitope_Rep5 1030.51825557326 1030.51714993586 68.046 2 -0.786069571332248 0.2430882952098248 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 53580 26594 KRRILLLIP True NCI_RA007_Epitope_Rep1 1120.7808334794 1120.7797299358601 110.14 2 -0.7860894525149175 0.24309577161481827 1.0 ['nc|ENSG00000162594|Q5VWK5-5|IL23R', 'nc|ENSG00000162594|Q5VWK5-6|IL23R', 'nc|ENSG00000162594|Q5VWK5-2|IL23R', 'IL23R|p.T505Nfs*6|1|0.35|ENSG00000162594|chr1:67258750-67258751|-/A|frameshift_variant', 'ENSG00000162594|ENST00000347310|IL23R'] 99977 20596 SIPEYVSVRF True PC9_epitope_Rep1 1195.62372370131 1195.62262993586 84.037 2 -0.7861102856665111 0.24309577161481827 1.0 ['ENSG00000083535|ENST00000326291|PIBF1', 'nc|ENSG00000083535|Q8WXW3-4|PIBF1'] 36204 19331 GVCGWILF True PC9_epitope_Rep5 893.4469456396499 893.44584993586 79.401 2 -0.7862209383098935 0.24315043578215256 1.0 ['nc|ENSG00000133115|Q8TAV4-2|STOML3', 'ENSG00000133115|ENST00000379631|STOML3'] 72092 10262 MFCSYDFWNP True PC9_epitope_Rep3 1308.4943664078796 1308.49326993586 44.421 2 -0.7862367665915818 0.24317599813758584 1.0 ['ENST00000264963.8_2_2:97371867-97372074:-|nuORF'] 127159 21721 VLVADFLEQN True PC9_epitope_Rep6 1146.5920892198599 1146.59044490379 96.437 3 -0.7862640688003645 0.24318347155536155 1.0 ['ENSG00000102547|ENST00000409308|CAB39L'] 9156 15189 AVLDRNVAI True PC9_epitope_Rep4 969.5607295219299 969.55962993586 66.348 2 -0.7862757354020686 0.24318347155536155 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 12513 10088 DKIRNDFCNK True PC9_epitope_Rep5 1251.6030053400698 1251.60190993586 43.786 2 -0.7862958538344286 0.24319094453820636 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'nc|ENSG00000160218|P48553-2|TRAPPC10'] 124198 20495 VGTAQRLLQRP True PC9_epitope_Rep6 1237.7255034312498 1237.7244099358602 91.558 2 -0.786308795563469 0.24319094453820636 1.0 ['ENSG00000167971|ENST00000343516|CASKIN1', 'CASKIN1|p.G330Afs*49|1|0.24|ENSG00000167971|chr16:2186766-2186766|C/-|frameshift_variant'] 18944 8377 ELEIQALRWAI True PC9_epitope_Rep2 1340.7452358163198 1340.7436049037901 37.595 3 -0.7863335344652586 0.24320195539260617 1.0 ['ENST00000492515.1_1_11:558546-558956:-|nuORF', 'ENSG00000185522|ENST00000329451|LMNTD2'] 14854 18921 DVWRKKYMRWM True H1975_Epitope_Rep3 1597.8009939539697 1597.7998899358602 79.35 2 -0.7863646073084942 0.2432239761402488 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 11323 7383 DELGYDDDFPV True H1975_Epitope_Rep2 1283.51937777207 1283.51773490379 33.339 3 -0.786369485365035 0.2432239761402488 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 10228 26165 CCCCCGGG True H1975_Epitope_Rep2 704.1208797689599 704.1203249679301 107.54 1 -0.7864682637939909 0.24323498603351956 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 131343 9496 VTGNVEGQWFL True NCI_RA007_Epitope_Rep1 1248.6138872935996 1248.61278993586 40.932 2 -0.7864792306478606 0.2432424568651983 1.0 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000529199.1_1_11:66333209-66333615:-|nuORF', 'ENST00000527141.5_1_11:66331945-66334941:-|nuORF'] 29288 20010 FVAWMHFL True PC9_epitope_Rep6 1049.51569390581 1049.5145899358602 89.634 2 -0.7864985228326274 0.2432424568651983 1.0 ['ENSG00000148344|ENST00000340607|PTGES'] 46118 6099 ISIQNPFPICR True NCI_RA007_Epitope_Rep4 1286.68052738478 1286.67942993586 30.075 2 -0.7865107902329797 0.243247567378878 1.0 ['ENST00000357635.9_1_15:75192875-75193112:-|nuORF'] 18654 11630 EKYQLRLNGMK True NCI_RA007_Epitope_Rep1 1378.7391048900597 1378.7380099358602 49.21 2 -0.7865258394468493 0.243247567378878 1.0 ['ENST00000484561.5_1_2:203690406-203693732:-|nuORF'] 101902 8207 SLPSVRRHMI True NCI_RA007_Epitope_Rep4 1194.6655460269799 1194.6644499358601 38.354 2 -0.7865342074151701 0.243247567378878 1.0 ['ENSG00000249709|ENST00000339282|ZNF564', 'ENST00000593682.1_1_19:12637262-12688404:-|nuORF'] 25178 14417 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 63.363 2 -0.7865660276917509 0.243247567378878 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 102108 10349 SLRKTRPL True PC9_epitope_Rep2 969.6083484206899 969.60724993586 45.133 2 -0.7865942778803322 0.243247567378878 1.0 ['ENSG00000152464|ENST00000378197|RPP38'] 42200 16443 IDRRYAWI True H1975_Epitope_Rep2 1091.58761297611 1091.58650993586 68.467 2 -0.7866004865598688 0.243247567378878 1.0 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'ENST00000576149.5_1_17:503295-579448:-|nuORF', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 84159 9617 PYHAYYRHKVS True H1975_Epitope_Rep1 1419.70476798667 1419.70366993586 41.917 2 -0.7866007794947082 0.243247567378878 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1', 'ENST00000463818.1_1_22:30742246-30752805:-|nuORF'] 13153 21734 DLRKKTETF True PC9_epitope_Rep5 1136.61897267404 1136.6178699358602 88.632 2 -0.7866118831672685 0.243247567378878 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27'] 58151 19565 LEKQLLQAN True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 80.306 2 -0.7866208644706417 0.243247567378878 1.0 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 58308 15809 LEMAPLSLAP True H1975_Epitope_Rep2 1040.55761828744 1040.55652993586 65.997 2 -0.7866258819615105 0.243247567378878 1.0 ['ENST00000253727.9_2_19:50880073-50881037:+|nuORF', 'ENST00000597130.5_3_19:50879767-50881034:+|nuORF'] 102543 15378 SLVRWIRR True PC9_epitope_Rep1 1084.6617809758798 1084.66068993586 63.969 2 -0.7866502774190731 0.243247567378878 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|319|3|anti-sense'] 46651 11801 ITDNMNLYIE True H1975_Epitope_Rep3 1224.56963952312 1224.5685499358601 50.539 2 -0.7866650029900982 0.243247567378878 1.0 ['ENST00000289316.2_1_6:26171232-26171412:+|nuORF'] 128939 20481 VQIEQEFL True PC9_epitope_Rep6 1004.5178616504398 1004.51676993586 91.501 2 -0.786681777960251 0.243247567378878 1.0 ['ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 132513 6132 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep1 1029.44371111445 1029.4426099358602 28.401 2 -0.7866846847887989 0.243247567378878 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 63876 12697 LNNALFREEQA True NCI_RA007_Epitope_Rep1 1303.65206370747 1303.65096993586 53.372 2 -0.7867112269095852 0.243247567378878 1.0 ['CCDC171|p.L1047F|1|0.38|ENSG00000164989|chr9:15784566-15784566|C/T|missense_variant'] 78359 13168 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 55.923 3 -0.7868325675845832 0.24337493091311052 1.0 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 67124 11393 LSQLPQIPQFQ True H1975_Epitope_Rep1 1297.7030366511701 1297.70192993586 48.802 2 -0.7868706468047557 0.2433859355683223 1.0 ['nc|ENSG00000100354|Q9UPQ9-2|TNRC6B', 'nc|ENSG00000100354|Q9UPQ9-1|TNRC6B', 'ENSG00000100354|ENST00000454349|TNRC6B'] 102326 8410 SLSRYIFEKPR True NCI_RA007_Epitope_Rep1 1394.7670338900598 1394.7653849037902 36.715 3 -0.7868847452553065 0.2433933999447329 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 33046 20572 GILDFYILL True NCI_RA007_Epitope_Rep4 1065.61103375929 1065.60992993586 89.105 2 -0.7869394073028714 0.2433933999447329 1.0 ['ENSG00000090402|ENST00000264382|SI'] 62571 19633 LLKLSLSDPV True PC9_epitope_Rep1 1083.6539612004299 1083.65286993586 80.343 2 -0.7869867338016432 0.24341894761336863 1.0 ['ENST00000290573.6_1_2:75061370-75061754:+|nuORF'] 115975 23056 TSILRKTTTV True PC9_epitope_Rep5 1118.66592286646 1118.66537496793 93.674 1 -0.7870332945355121 0.24344449453889672 1.0 ['CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 120518 12486 VEFKAQDTI True NCI_RA007_Epitope_Rep5 1049.53932537101 1049.53822993586 54.684 2 -0.787124661843004 0.2434810430331147 1.0 ['nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 92659 19469 RNLLRIREK True H1975_Epitope_Rep2 1196.746573229 1196.74546993586 80.793 2 -0.7871286870541889 0.2434810430331147 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.R1075*|1|0.13|ENSG00000172493|chr4:87132334-87132341|GTATTCTC/-|frameshift_variant'] 60632 8435 LHKDLKQK True NCI_RA007_Epitope_Rep5 1008.60801406752 1008.60690993586 39.126 2 -0.7871701103900787 0.2434995055552324 1.0 ['ENSG00000023892|ENST00000316637|DEF6'] 82924 8318 PSCQRRGRRRS True PC9_epitope_Rep5 1357.72216646965 1357.72051490379 36.933 3 -0.7871816325938656 0.2434995055552324 1.0 ['ENST00000573539.5_1_17:3442880-3458098:-|nuORF'] 11454 10227 DFAQAAIFAID True NCI_RA007_Epitope_Rep3 1180.5764391557198 1180.57480490379 47.307 3 -0.7871888665522375 0.2434995055552324 1.0 ['ENST00000460653.1_1_1:114441933-114442625:-|nuORF'] 57710 23307 LEEKVLRLTRT True PC9_epitope_Rep5 1356.8088987020396 1356.8078099358602 94.63 2 -0.7872306879169854 0.24353250832521414 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 65153 22311 LQNTDVVSL True NCI_RA007_Epitope_Rep1 987.5236753068699 987.52312496793 91.4 1 -0.7872413305367826 0.24353250832521414 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.L2931Wfs*101|1|0.21|ENSG00000086570|chr5:151542336-151542336|G/-|frameshift_variant'] 122702 13566 VGGGPLRKDLG True H1975_Epitope_Rep1 1067.60874234351 1067.60764993586 57.308 2 -0.7872521364956672 0.24353250832521414 1.0 ['SYT3|p.A375Pfs*76|1|0.13|ENSG00000213023|chr19:50629452-50629452|C/-|frameshift_variant', 'ENSG00000213023|ENST00000600079|SYT3'] 62777 23075 LLLRRPPRC True PC9_epitope_Rep5 1122.6808021682998 1122.67915490379 93.743 3 -0.7872656438798564 0.24353996713635503 1.0 ['ENST00000474812.1_1_X:51929763-51929980:+|nuORF'] 59528 8669 LFSEVILFQLW True NCI_RA007_Epitope_Rep2 1393.7645742785699 1393.76293490379 38.368 3 -0.7872716251402021 0.24353996713635503 1.0 ['ENST00000497194.6_1_11:71713256-71713580:+|nuORF'] 102834 21094 SNRNKVRHTKK True NCI_RA007_Epitope_Rep4 1366.7905632992995 1366.78891490379 91.455 3 -0.7872847315906133 0.24355096699142068 1.0 ['ENSG00000196350|ENST00000601693|ZNF729'] 47562 12322 IVTVGVIKAV True PC9_epitope_Rep1 997.6535672776099 997.65246993586 52.251 2 -0.7873109770445456 0.24356196652658824 1.0 ['ENST00000443590.1_1_2:107313789-107313948:-|nuORF'] 10229 26244 CCCCCGGG True H1975_Epitope_Rep2 704.1208797689599 704.1203249679301 107.93 1 -0.7873835519126142 0.24358750654336067 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'PCDH10|p.G767V|1|0.2|ENSG00000138650|chr4:133152440-133152440|G/T|missense_variant'] 41862 9572 IAYRKAVP True PC9_epitope_Rep6 916.5494365622399 916.54832993586 47.119 2 -0.7873875820548915 0.24359850522734214 1.0 ['ENST00000573617.1_1_16:3493766-3498541:+|nuORF', 'ENST00000572169.5_2_16:3493766-3526228:+|nuORF', 'nc|ENSG00000122390|Q9H7X0-2|NAA60'] 89337 24321 QWQRRYFYLFP True PC9_epitope_Rep5 1602.8095674083797 1602.80846993586 98.583 2 -0.7874156655909251 0.24363149936024195 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67049840-67052918:+|nuORF', 'ENST00000524899.1_1_11:67051750-67052658:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 69043 13140 LTQKLQEVEI True PC9_epitope_Rep6 1199.6761531969898 1199.6750499358602 62.184 2 -0.7874315696523568 0.24363149936024195 1.0 ['ENSG00000152413|ENST00000334082|HOMER1', 'nc|ENSG00000152413|Q86YM7-2|HOMER1'] 116115 4670 TSSGRTSIPGP True NCI_RA007_Epitope_Rep4 1058.5356369729 1058.53452993586 24.385 2 -0.7874380912727138 0.24363149936024195 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant'] 69575 5645 LVDGREALW True H1975_Epitope_Rep3 1057.55564414149 1057.5545499358602 26.744 2 -0.787558840735607 0.24368611599808077 1.0 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF'] 25129 13105 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 57.509 2 -0.7875966849147079 0.2436935692580584 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 123981 14720 VGSASLEY True PC9_epitope_Rep6 824.3915985081601 824.39050993586 68.567 2 -0.7876061268928013 0.2436935692580584 1.0 ['ENST00000568996.1_1_1:25664643-25664691:-|nuORF'] 33119 2648 GISDRSNEL True PC9_epitope_Rep2 989.47778774361 989.47668993586 14.838 2 -0.7876922438124111 0.24373009988223493 1.0 ['TNR|p.I342N|1|0.19|ENSG00000116147|chr1:175396759-175396759|A/T|missense_variant'] 10506 14216 CKKWADIV True PC9_epitope_Rep5 961.5055231449298 961.50442993586 59.687 2 -0.7876968051664935 0.24373009988223493 1.0 ['ENSG00000134897|ENST00000257336|BIVM', 'nc|ENSG00000134897|Q86UB2-2|BIVM', 'ENST00000490317.1_1_13:103473357-103492212:+|nuORF'] 66395 10631 LSGKTWKAI True H1975_Epitope_Rep2 1002.5862159937799 1002.58510993586 45.915 2 -0.7877206933646315 0.24374109505393854 1.0 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-3|TECPR1'] 46109 19406 ISHYLTQE True PC9_epitope_Rep5 989.48181049489 989.48070993586 79.691 2 -0.78786591119944 0.2437669908558303 1.0 ['ENSG00000167216|ENST00000683218|KATNAL2'] 127158 20108 VLVADFLEQN True NCI_RA007_Epitope_Rep3 1146.5920892198599 1146.59044490379 87.624 3 -0.787875528774159 0.2437669908558303 1.0 ['ENSG00000102547|ENST00000409308|CAB39L'] 17005 12902 EGAVRRWQLWE True H1975_Epitope_Rep3 1428.7262317072398 1428.7251299358602 54.854 2 -0.7879082393244289 0.2437669908558303 1.0 ['ENST00000203630.9_2_12:6861510-6862293:-|nuORF'] 99756 21365 SIIPNKVAPV True PC9_epitope_Rep1 1036.6280808057597 1036.6269899358601 87.012 2 -0.7879282303659731 0.2437669908558303 1.0 ['ENSG00000107719|ENST00000263563|PALD1'] 57294 5174 LEAAGDKF True NCI_RA007_Epitope_Rep3 849.42323298961 849.42212993586 27.343 2 -0.7879401247563804 0.2437669908558303 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 15316 4252 EAFRLPGEAPV True H1975_Epitope_Rep3 1184.61897267404 1184.61733490379 21.472 3 -0.7879554503172433 0.24379252195150317 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 63810 11915 LNHFDIITEEV True PC9_epitope_Rep1 1328.6612314088402 1328.6601299358601 50.698 2 -0.7879761442316315 0.24379288289335968 1.0 ['HYDIN|p.D1530N|1|0.1|ENSG00000157423|chr16:70978964-70978964|C/T|missense_variant'] 21453 9097 ERKHFRSGRIA True H1975_Epitope_Rep2 1355.7534495145899 1355.7523499358601 39.942 2 -0.7879805466394149 0.24379288289335968 1.0 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant', 'MACC1|p.D299Ifs*7|1|0.2|ENSG00000183742|chr7:20159466-20159466|C/-|frameshift_variant'] 94428 24179 RRRRRHRH True NCI_RA007_Epitope_Rep2 1228.7350545422 1228.7339499358602 101.55 2 -0.7879940137843809 0.24379288289335968 1.0 ['RBM10|p.V569Yfs*6|1|0.49|ENSG00000182872|chrX:47181961-47181965|CGTCT/-|frameshift_variant', 'RBM10|p.A631Gfs*42|1|0.33|ENSG00000182872|chrX:47182263-47182264|-/G|frameshift_variant', 'RBM10|p.K627Rfs*77|1|0.16|ENSG00000182872|chrX:47182255-47182255|A/-|frameshift_variant', 'RBM10|p.D568Tfs*136|1|0.6|ENSG00000182872|chrX:47181956-47181956|C/-|frameshift_variant', 'RBM10|p.G840Afs*7|1|0.09|ENSG00000182872|chrX:47186152-47186152|G/-|frameshift_variant', 'nc|ENSG00000182872|P98175-2|RBM10', 'ENSG00000182872|ENST00000377604|RBM10', 'nc|ENSG00000182872|P98175-5|RBM10', 'RBM10|p.R186Tfs*23|1|0.69|ENSG00000182872|chrX:47175070-47175071|-/A|frameshift_variant', 'RBM10|p.P259Hfs*7|1|0.78|ENSG00000182872|chrX:47179369-47179369|C/-|frameshift_variant', 'RBM10|p.N164Tfs*102|1|0.71|ENSG00000182872|chrX:47173183-47173183|G/-|frameshift_variant'] 73955 5077 NCKKGVEHEKI True NCI_RA007_Epitope_Rep2 1283.6656055966298 1283.66395490379 24.373 3 -0.7880014792375535 0.24379288289335968 1.0 ['ENSG00000133302|ENST00000265140|SLF1'] 30635 17054 GAKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 73.592 3 -0.7880176292234538 0.24379678755723527 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 18690 4001 ELAGSLAR True NCI_RA007_Epitope_Rep2 815.45011644379 815.44900993586 20.201 2 -0.7880210019341868 0.24379678755723527 1.0 ['ENST00000525275.5_1_8:145154265-145154844:-|nuORF', 'nc|ENSG00000179526|Q9H0F6-2|SHARPIN', 'ENSG00000179526|ENST00000398712|SHARPIN'] 103352 9106 SPNRQWDE True PC9_epitope_Rep1 1030.4468219684998 1030.44572993586 39.878 2 -0.7880238947583276 0.24379678755723527 1.0 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ-CACNG4|1|fusion'] 41047 8917 HTLFGDELC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep1 1218.5703085088896 1218.56920993586 38.686 2 -0.7881544726704863 0.24392406535263678 1.0 ['CON__P02769'] 97010 5110 SCCECGCG True NCI_RA007_Epitope_Rep1 760.1648527559199 760.16374993586 23.961 2 -0.7881788539372071 0.24394959082518133 1.0 ['nc|ENSG00000145242|P54756-3|EPHA5', 'nc|ENSG00000145242|P54756|EPHA5'] 65710 19312 LSAWKISLTSR True PC9_epitope_Rep5 1260.7190210684798 1260.7179299358602 79.33 2 -0.7882270856052326 0.24396058024942585 1.0 ['ENST00000464003.1_1_2:206547990-206565476:+|nuORF'] 27538 11046 FNDGNAAVV True PC9_epitope_Rep3 905.4242956187699 905.42374496793 47.481 1 -0.788241619920341 0.24396447726050494 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 94434 19582 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 81.254 2 -0.7882796729872572 0.24396447726050494 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 132169 8985 VTVPPDVFFF True NCI_RA007_Epitope_Rep5 1166.60119735158 1166.60010993586 41.218 2 -0.7882807777392159 0.24396447726050494 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 55826 7621 LAPHSAIE True PC9_epitope_Rep4 836.43921740692 836.43812993586 36.695 2 -0.7883390087852032 0.24398645407903724 1.0 ['ENSG00000167566|ENST00000335999|NCKAP5L', 'nc|ENSG00000167566|Q9HCH0-2|NCKAP5L'] 95303 19229 RVQLMRIWQQE True H1975_Epitope_Rep1 1485.78745206481 1485.78634993586 80.126 2 -0.7883437421716023 0.24398645407903724 1.0 ['TMEM198|p.R263W|1|0.25|ENSG00000188760|chr2:219549196-219549196|C/T|missense_variant'] 133281 18262 VVTSVKTRVS True NCI_RA007_Epitope_Rep4 1074.6397081186199 1074.6386099358601 78.994 2 -0.7883686803302695 0.2440119760479042 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 39324 5411 HIVFWFHKSNQ True PC9_epitope_Rep5 1441.72550343125 1441.72384490379 25.825 3 -0.7884193529988869 0.24403395052757026 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 82044 7135 PLWRSPGS True H1975_Epitope_Rep3 898.4661008610999 898.4650099358599 32.416 2 -0.7884257057509758 0.24403395052757026 1.0 ['ENST00000394434.6_1_5:145557197-145562175:-|nuORF'] 123886 18718 VGRRRRHR True NCI_RA007_Epitope_Rep1 1091.6649092937098 1091.66437496793 76.95 1 -0.7884971605715909 0.24406405300938708 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 31296 18136 GDIVMTQSPL True NCI_RA007_Epitope_Rep4 1059.52704643515 1059.52647496793 78.481 1 -0.7885075080517008 0.24406405300938708 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 81957 18221 PLTGVKEA True PC9_epitope_Rep4 813.45961849833 813.4590749679301 78.156 1 -0.7885159540975121 0.24406405300938708 1.0 ['ENSG00000070018|ENST00000261349|LRP6'] 54117 24274 KVLVKARRKLI True NCI_RA007_Epitope_Rep1 1322.9238093149797 1322.92216490379 100.55 3 -0.7885206423626915 0.24406405300938708 1.0 ['ENST00000437151.1_1_6:87680204-87680483:+|nuORF'] 116535 23700 TTTKTLELLLS True NCI_RA007_Epitope_Rep4 1218.7071189721 1218.7060299358602 102.78 2 -0.7885309884477197 0.24406405300938708 1.0 ['ENST00000230914.4_1_5:44820328-44820394:+|nuORF'] 96413 9742 SAAELTSMEL True PC9_epitope_Rep1 1050.49032657326 1050.48922993586 42.332 2 -0.7885332054570626 0.24406405300938708 1.0 ['nc|ENSG00000183977|A8MPX8-2|PP2D1', 'nc|ENSG00000183977|A8MPX8-3|PP2D1', 'ENSG00000183977|ENST00000389050|PP2D1'] 64736 13341 LPWVEGVEP True H1975_Epitope_Rep3 1024.5229470308798 1024.52184993586 56.578 2 -0.7885383333605852 0.24406405300938708 1.0 ['ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 137391 5964 YDYFQIKMQNY True H1975_Epitope_Rep1 1511.67550157399 1511.67440993586 28.011 2 -0.7885554551955376 0.24406405300938708 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9', 'SAMD9|p.T529Hfs*5|1|0.05|ENSG00000205413|chr7:93104516-93104516|G/-|frameshift_variant'] 119903 18596 VDKARKRHHRR True NCI_RA007_Epitope_Rep5 1457.85522924453 1457.85412993586 78.345 2 -0.7885584246933404 0.24406405300938708 1.0 ['ENST00000488757.5_1_6:29644775-29644817:-|nuORF'] 33538 9629 GLEDPHVP True PC9_epitope_Rep3 862.41848196234 862.41738993586 41.988 2 -0.7885713020055188 0.24406405300938708 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 51014 112 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 0.59018 3 -0.788575762343606 0.24406405300938708 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 1694 7916 AEGGVTSEDY True H1975_Epitope_Rep2 1026.41418442754 1026.4130899358602 35.398 2 -0.7885779213175655 0.24406405300938708 1.0 ['nc|ENSG00000066427|P54252-1|ATXN3', 'ATXN3|p.P140Qfs*3|1|0.14|ENSG00000066427|chr14:92088786-92088786|G/-|frameshift_variant', 'ENST00000553309.5_1_14:92547307-92572896:-|nuORF', 'ATXN3|p.D307Gfs*11|1|0.06|ENSG00000066427|chr14:92071008-92071009|-/T|frameshift_variant', 'nc|ENSG00000066427|P54252-4|ATXN3', 'ENSG00000066427|ENST00000644486|ATXN3', 'ENST00000556644.5_1_14:92537322-92572896:-|nuORF', 'ENST00000507965.5_1_14:92560088-92572896:-|nuORF', 'ENST00000511362.5_1_14:92556902-92572896:-|nuORF', 'ENST00000556339.5_1_14:92537322-92572896:-|nuORF', 'ENST00000454964.3_1_14:92562711-92572896:-|nuORF', 'ENST00000553686.5_1_14:92547307-92572896:-|nuORF'] 70013 25592 LVMCIVLRP True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 103.75 2 -0.788623636178283 0.24406828913912096 1.0 ['ENSG00000078098|ENST00000188790|FAP', 'ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'FAP|p.S363Qfs*38|1|0.1|ENSG00000078098|chr2:162203073-162203107|AGCCATCCTTGTCACTAAATATTTTGTAGTACGAA/-|frameshift_variant'] 44145 19413 IISLWHPAI True PC9_epitope_Rep6 1048.60695143836 1048.60584993586 87.328 2 -0.788638754908762 0.24406828913912096 1.0 ['NLGN4X|p.T609Nfs*43|1|0.54|ENSG00000146938|chrX:5893442-5893443|-/T|frameshift_variant', 'NLGN4Y|p.T609Nfs*43|1|0.42|ENSG00000165246|chrY:14840634-14840635|-/A|frameshift_variant'] 83583 7907 PVARPQAMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 35.24 2 -0.7886512531170584 0.24406828913912096 1.0 ['ENST00000475589.1_1_15:43886371-43886566:+|nuORF', 'ENST00000481666.1_1_15:43886371-43886950:+|nuORF'] 108970 13398 TAFDLWEQAE True H1975_Epitope_Rep1 1208.5349682665599 1208.5338699358601 56.647 2 -0.7886629218653546 0.24406828913912096 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1'] 61843 5272 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 28.071 2 -0.7886629857635704 0.24406828913912096 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 114307 16401 TPQKLPSL True PC9_epitope_Rep3 882.5174677276199 882.51636993586 68.225 2 -0.7886675200568551 0.24406828913912096 1.0 ['ENSG00000185009|ENST00000355264|AP3M1'] 67042 6516 LSPTGVLDQK True NCI_RA007_Epitope_Rep2 1056.5815245361598 1056.5804299358601 29.956 2 -0.7886777656489576 0.24406828913912096 1.0 ['PLXNA2|p.Y1854Lfs*6|1|0.42|ENSG00000076356|chr1:208028034-208028038|GAGTA/-|frameshift_variant', 'ENSG00000076356|ENST00000367033|PLXNA2'] 55819 7195 LAPEYEKA True PC9_epitope_Rep1 919.4650978015899 919.46400993586 32.488 2 -0.7887777184529265 0.24416644872577223 1.0 ['ENSG00000155660|ENST00000652332|PDIA4'] 28625 12089 FSIIPEAP True PC9_epitope_Rep3 872.4643695256 872.46326993586 51.542 2 -0.7888239843721169 0.24417743036889591 1.0 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'ARHGEF35|p.M28I|1|0.09|ENSG00000213214|chr7:144188300-144188300|C/G|missense_variant', 'ENSG00000213214|ENST00000378115|ARHGEF35'] 4400 20615 AIPALEAAL True PC9_epitope_Rep2 867.5065686907499 867.50546993586 84.73 2 -0.7888319635404055 0.24417776873792332 1.0 ['ENSG00000174844|ENST00000495027|DNAH12'] 84028 11137 PVTVQEFMEVK True NCI_RA007_Epitope_Rep5 1305.66387426113 1305.66276993586 49.474 2 -0.7888628641783186 0.24417776873792332 1.0 ['nc|ENSG00000139436|Q14161-3|GIT2', 'ENSG00000139436|ENST00000355312|GIT2', 'ENST00000549999.1_1_12:110386630-110391055:-|nuORF', 'ENST00000551455.5_1_12:110388962-110434038:-|nuORF', 'nc|ENSG00000139436|Q14161-2|GIT2', 'nc|ENSG00000139436|Q14161-11|GIT2', 'nc|ENSG00000139436|Q14161-7|GIT2', 'nc|ENSG00000139436|Q14161-9|GIT2', 'nc|ENSG00000139436|Q14161-6|GIT2', 'nc|ENSG00000139436|Q14161-5|GIT2'] 79846 10682 PEICLTTWGP True H1975_Epitope_Rep3 1115.53213181559 1115.53102993586 46.164 2 -0.7888884977167544 0.24417776873792332 1.0 ['ENST00000504636.1_1_5:87565907-87566030:+|nuORF'] 76586 9634 NQLLNVDLTK True H1975_Epitope_Rep1 1156.6451874218799 1156.6440899358602 41.985 2 -0.7888954889502241 0.24417776873792332 1.0 ['nc|ENSG00000173588|Q9Y592-2|CEP83', 'ENSG00000173588|ENST00000397809|CEP83'] 128902 8342 VQFVPFRDYID True H1975_Epitope_Rep1 1397.6979512707296 1397.6968499358602 37.018 2 -0.7889939280740756 0.24418874941887495 1.0 ['ENSG00000139117|ENST00000331366|CPNE8', 'ENST00000546603.5_1_12:39047686-39073432:-|nuORF', 'nc|ENSG00000139117|Q86YQ8-2|CPNE8'] 34127 14338 GMWRCRWA True NCI_RA007_Epitope_Rep4 1064.4796598336 1064.4785699358602 62.456 2 -0.7890070847165733 0.24418942475305055 1.0 ['NUDCD2|p.T16Ifs*30|1|0.16|ENSG00000170584|chr5:163459926-163460004|TCCTGGGCGCGCGTGCCTGGCGGCACCTGAACTTCAATGAACACCTCCTCCAAGGTCTGGTACCACTGGCCCCACGGGG/-|frameshift_variant'] 11145 1813 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 9.8661 2 -0.7890110135055173 0.24418942475305055 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 116536 25005 TTTKTLELLLS True NCI_RA007_Epitope_Rep5 1218.7071189721 1218.7060299358602 103.68 2 -0.7890132006920497 0.24418942475305055 1.0 ['ENST00000230914.4_1_5:44820328-44820394:+|nuORF'] 56634 13552 LDIEEQKLYWA True H1975_Epitope_Rep1 1406.7081816012599 1406.70708993586 57.251 2 -0.7890928070440794 0.24418942475305055 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant'] 64237 17828 LPGVSLVSG True PC9_epitope_Rep1 827.47526856247 827.47472496793 73.369 1 -0.7890987673880298 0.24418942475305055 1.0 ['ENST00000597852.5_1_19:49838763-49839342:+|nuORF'] 137493 7937 YEEFWIKYAKY True NCI_RA007_Epitope_Rep1 1538.74456710998 1538.7429149037903 34.866 3 -0.7891264632461625 0.24418942475305055 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 59245 4858 LFFFLLVFSK True NCI_RA007_Epitope_Rep2 1259.7318175983098 1259.7301649037902 23.52 3 -0.7891473637092931 0.24418942475305055 1.0 ['ENST00000532312.2_1_11:118995018-118995186:+|nuORF'] 11472 11987 DFEYSTQSY True H1975_Epitope_Rep1 1138.44548455582 1138.44497496793 51.115 1 -0.7891555263560239 0.24418942475305055 1.0 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'ELP3-PNOC|1|fusion', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 46247 11315 ISNQTQELA True PC9_epitope_Rep3 1002.4981888350198 1002.49708993586 48.529 2 -0.7891917988496852 0.24419685657011708 1.0 ['ENST00000295951.7_1_3:57742468-57743248:+|nuORF'] 127018 20447 VLSEIDKL True PC9_epitope_Rep3 915.5276980581499 915.52660993586 83.906 2 -0.7892111402923259 0.24419685657011708 1.0 ['ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH', 'DGKH|p.W396L|1|0.42|ENSG00000102780|chr13:42168508-42168508|G/T|missense_variant'] 29996 16030 FWWYRGSLFIY True H1975_Epitope_Rep2 1536.7554065771997 1536.7543099358602 66.857 2 -0.7892733973094825 0.24423688682945252 1.0 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF'] 132117 19056 VTVDEELGEI True PC9_epitope_Rep3 1102.5393849406598 1102.5382899358601 78.521 2 -0.7892824829896951 0.2442443169438594 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 32101 9940 GETEKKDFRAA True NCI_RA007_Epitope_Rep2 1250.62551460646 1250.62440993586 43.291 2 -0.7892929849475276 0.2442443169438594 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant'] 105918 3003 SSSDSSSDSD True PC9_epitope_Rep5 972.31559258508 972.31504496793 16.462 1 -0.7893349996093943 0.24425529442523894 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'ENSG00000130382|ENST00000252674|MLLT1'] 63408 17723 LLVLNSTSFL True PC9_epitope_Rep1 1105.6383111362902 1105.63720993586 72.969 2 -0.7893582778754742 0.24426627158772352 1.0 ['PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1'] 12541 6539 DKLPLFKRQYE True PC9_epitope_Rep2 1435.7823496010299 1435.78069490379 30.566 3 -0.7893956104994658 0.24428822495606328 1.0 ['ENSG00000112996|ENST00000507110|MRPS30'] 3770 7031 AGSWPGSEALR True NCI_RA007_Epitope_Rep2 1129.55162139021 1129.5505299358601 31.971 2 -0.7894233622370568 0.24428822495606328 1.0 ['ENST00000590627.5_1_19:13002397-13002475:+|nuORF'] 47093 10218 ITTHYTIYP True PC9_epitope_Rep2 1107.5600608155898 1107.5589699358602 44.638 2 -0.7894463840049624 0.24429210480450822 1.0 ['ETFDH|p.P483Sfs*7|1|0.1|ENSG00000171503|chr4:158706349-158706350|-/T|frameshift_variant', 'ENSG00000171503|ENST00000511912|ETFDH', 'ENST00000436096.2_1_4:159593593-159602751:+|nuORF'] 80438 20122 PGKREPLRSVL True H1975_Epitope_Rep2 1250.7459045226599 1250.74480993586 83.387 2 -0.7894488578969385 0.24429210480450822 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 69978 20925 LVLNVKIKP True PC9_epitope_Rep2 1022.68520175906 1022.68410993586 85.934 2 -0.7894555603656278 0.24429210480450822 1.0 ['ENST00000380916.8_1_9:14611214-14611316:-|nuORF'] 5147 14461 ALLQETAY True PC9_epitope_Rep1 907.46509780159 907.46400993586 60.447 2 -0.7895177224988474 0.2443140558282743 1.0 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 65917 5675 LSDQGCEYSCV True H1975_Epitope_Rep2 1202.45837482198 1202.45726993586 26.826 2 -0.7895238888551284 0.2443140558282743 1.0 ['MATN2|p.H493Q|1|0.45|ENSG00000132561|chr8:98007507-98007507|T/A|missense_variant'] 49546 17746 KFIKEKSTL True PC9_epitope_Rep6 1092.6542955536 1092.6531899358602 80.895 2 -0.7895499595438836 0.24432503086195628 1.0 ['ENSG00000150773|ENST00000280350|PIH1D2'] 33714 12323 GLHSKVIL True PC9_epitope_Rep2 865.53853752537 865.53744993586 52.712 2 -0.7895630537046155 0.24433245712128032 1.0 ['ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A', 'ENST00000487668.5_1_22:20100432-20101310:-|nuORF', 'ENST00000487378.1_1_22:20100088-20100785:-|nuORF'] 17928 9382 EIAPAAHLDP True H1975_Epitope_Rep1 1032.52400966004 1032.52290993586 40.998 2 -0.7895746869444696 0.24433245712128032 1.0 ['ENSG00000173599|ENST00000393960|PC', 'nc|ENSG00000173599|P11498-2|PC', 'PC|p.L883Sfs*26|1|0.04|ENSG00000173599|chr11:66850292-66850293|-/TT|frameshift_variant', 'PC|p.G882Efs*30|1|0.04|ENSG00000173599|chr11:66850293-66850294|-/AGACAAGTTCT|frameshift_variant', 'PC|p.M1012Cfs*22|1|0.07|ENSG00000173599|chr11:66849724-66849724|T/-|frameshift_variant'] 47439 14555 IVLWGFRWLI True PC9_epitope_Rep5 1301.7648490620898 1301.76319490379 60.985 3 -0.7896408095546923 0.24435440537910802 1.0 ['ENSG00000103227|ENST00000262301|LMF1'] 75637 7360 NLEHRPQYLEQ True NCI_RA007_Epitope_Rep2 1425.7000765290502 1425.69896993586 33.253 2 -0.7896452378126351 0.24435440537910802 1.0 ['ENST00000587257.1_1_19:36426667-36427862:+|nuORF'] 114683 16470 TQGKKRKA True NCI_RA007_Epitope_Rep3 915.5613982282698 915.56030993586 72.562 2 -0.7897125849923666 0.24437280357817084 1.0 ['nc|ENSG00000153774|Q9UEE9-2|CFDP1', 'ENST00000566901.5_1_16:75428986-75467250:-|nuORF', 'ENSG00000153774|ENST00000283882|CFDP1'] 105919 3139 SSSDSSSDSD True PC9_epitope_Rep5 972.31559258508 972.31504496793 17.081 1 -0.7897157364671225 0.24437280357817084 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'ENSG00000130382|ENST00000252674|MLLT1'] 53131 6289 KPVDKDSYVR True NCI_RA007_Epitope_Rep4 1205.64043639461 1205.6393299358601 30.795 2 -0.7897334804707602 0.24437280357817084 1.0 ['A1CF|p.N370Kfs*11|1|0.32|ENSG00000148584|chr10:50816037-50816038|-/T|frameshift_variant', 'A1CF|p.Q351Rfs*34|1|0.22|ENSG00000148584|chr10:50816096-50816096|G/-|frameshift_variant', 'A1CF|p.L439*|1|0.15|ENSG00000148584|chr10:50813888-50813888|A/-|frameshift_variant', 'nc|ENSG00000148584|Q9NQ94-5|A1CF', 'nc|ENSG00000148584|Q9NQ94-6|A1CF', 'nc|ENSG00000148584|Q9NQ94-3|A1CF', 'ENSG00000148584|ENST00000373997|A1CF', 'nc|ENSG00000148584|Q9NQ94|A1CF', 'nc|ENSG00000148584|Q9NQ94-4|A1CF'] 16189 19451 EEEDSLSPLQI True PC9_epitope_Rep4 1258.5928770654998 1258.59178993586 82.933 2 -0.7897563560920711 0.24439829807008118 1.0 ['MAGEC1|p.G685E|1|0.55|ENSG00000155495|chrX:141907458-141907458|G/A|missense_variant'] 20974 17360 EQQKWVSRLVK True NCI_RA007_Epitope_Rep1 1399.79358299107 1399.7924899358602 71.66 2 -0.7897994357192192 0.24442379182156135 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 36882 15534 GVLLTRQSL True PC9_epitope_Rep5 985.59202965021 985.59092993586 64.762 2 -0.7898344789178917 0.24442411569959924 1.0 ['ENST00000492435.1_1_3:8669382-8671410:-|nuORF'] 47651 15412 IWKKMIKF True NCI_RA007_Epitope_Rep1 1092.6517934557999 1092.65068993586 64.028 2 -0.7898680200972651 0.24442411569959924 1.0 ['ENSG00000118156|ENST00000391901|ZNF541', 'nc|ENSG00000118156|Q9H0D2-2|ZNF541'] 83239 12438 PSWGASCPELR True PC9_epitope_Rep2 1201.55499251849 1201.55335490379 53.149 3 -0.7899110891834531 0.24442411569959924 1.0 ['ENSG00000203786|ENST00000606109|KPRP'] 4098 13254 AHQQVWAAL True PC9_epitope_Rep6 1022.5297637468199 1022.52866993586 62.632 2 -0.7899285409719196 0.24442411569959924 1.0 ['ENSG00000170881|ENST00000303545|RNF139'] 94799 27209 RSPRGILG True PC9_epitope_Rep3 854.5086343794198 854.50752993586 111.98 2 -0.7899504111682407 0.24443153767968637 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 66893 7806 LSNLIPGTF True PC9_epitope_Rep5 960.5280324113199 960.52692993586 34.969 2 -0.7899812655206672 0.24443153767968637 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13', 'ENST00000484268.1_1_7:48352666-48443694:+|nuORF'] 66736 7058 LSLIDLTYVS True NCI_RA007_Epitope_Rep5 1122.61724133854 1122.6161499358602 33.829 2 -0.7900583808552987 0.24446444905841186 1.0 ['OR2T10|p.I74V|1|0.31|ENSG00000184022|chr1:248593549-248593549|T/C|missense_variant'] 32311 12190 GFDLDIKGW True NCI_RA007_Epitope_Rep2 1049.51819600361 1049.5170899358602 52.014 2 -0.7900735999649411 0.24446444905841186 1.0 ['ENSG00000147408|ENST00000692225|CSGALNACT1', 'nc|ENSG00000147408|Q8TDX6-2|CSGALNACT1', 'ENST00000397998.7_1_8:19263293-19315147:-|nuORF'] 87222 6172 QPKAMLGP True NCI_RA007_Epitope_Rep2 840.4527592960799 840.45166993586 28.616 2 -0.7901670685273586 0.24446444905841186 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 129271 13392 VQVHLHWWLWW True NCI_RA007_Epitope_Rep2 1588.8091734855598 1588.8080699358602 56.733 2 -0.7902294128224974 0.2444754188808549 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF'] 61837 5875 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 27.993 2 -0.790286908709422 0.24451187641558744 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 31153 5240 GAVVLLVLSCQ True NCI_RA007_Epitope_Rep1 1100.6263665536 1100.6252699358602 24.465 2 -0.7902869717046417 0.24451187641558744 1.0 ['ENST00000552941.5_3_14:65528035-65528353:+|nuORF'] 11447 7524 DEYKQYYYAAR True H1975_Epitope_Rep1 1468.6622940380003 1468.6611899358602 33.939 2 -0.7903601822121548 0.2445447814283018 1.0 ['nc|ENSG00000158089|Q96FL9-2|GALNT14', 'nc|ENSG00000158089|Q96FL9-4|GALNT14', 'ENSG00000158089|ENST00000349752|GALNT14', 'ENST00000486564.5_1_2:31133891-31178528:-|nuORF', 'nc|ENSG00000158089|Q96FL9-3|GALNT14'] 64204 24820 LPGLFLLQQL True PC9_epitope_Rep1 1140.69068106232 1140.6890249037901 100.37 3 -0.7903644727664906 0.2445447814283018 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'ENST00000580882.5_1_17:26966325-26972074:-|nuORF', 'ENST00000579253.1_1_17:26967576-26969063:-|nuORF', 'nc|ENSG00000007202|Q14667-4|BLTP2', 'ENST00000577417.5_1_17:26966838-26970337:-|nuORF'] 24388 6456 FAAGKNGL True NCI_RA007_Epitope_Rep5 776.41808803952 776.41698993586 31.498 2 -0.790364596777313 0.2445447814283018 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 63736 5950 LNEARREH True H1975_Epitope_Rep1 1023.52098996827 1023.5198899358601 27.957 2 -0.7903866079175962 0.24454864841322843 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'ENST00000486060.1_1_6:31112443-31112875:-|nuORF'] 68580 15431 LTGVSLLPAV True PC9_epitope_Rep5 968.5906326678798 968.58952993586 64.364 2 -0.7904234916115763 0.24454864841322843 1.0 ['ENSG00000172935|ENST00000309099|MRGPRF'] 27001 12641 FLEPLMPAVL True PC9_epitope_Rep1 1128.62530392444 1128.62365490379 53.494 3 -0.7904275693850435 0.24454864841322843 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 63497 16459 LLWYKRTRVKR True PC9_epitope_Rep6 1517.9306856005699 1517.9290349037901 75.723 3 -0.7904495071103156 0.24455606526914814 1.0 ['ENST00000473125.5_1_15:34697252-34699017:-|nuORF'] 22052 12888 ESLNHLLY True PC9_epitope_Rep5 987.5025459394701 987.50144993586 54.584 2 -0.7904669731863205 0.24455606526914814 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant', 'PRKDC|p.D566G|1|0.33|ENSG00000253729|chr8:47933099-47933099|T/C|missense_variant'] 20000 4618 ELWWQGLPP True H1975_Epitope_Rep2 1124.5654805491997 1124.5638449037901 22.865 3 -0.7904778219265681 0.24456703200987154 1.0 ['ENSG00000108239|ENST00000225235|TBC1D12'] 69861 14675 LVHRSQRDP True PC9_epitope_Rep1 1106.5944892617 1106.5933899358602 61.27 2 -0.7905536318926755 0.24461799759025651 1.0 ['ENSG00000135521|ENST00000367576|LTV1'] 69417 12136 LTWSRESPL True H1975_Epitope_Rep2 1087.56620882519 1087.5651099358602 51.765 2 -0.7905669841886096 0.24461799759025651 1.0 ['ENST00000565089.5_1_16:28943294-28944055:+|nuORF', 'CD19|p.Q512Pfs*14|1|0.45|ENSG00000177455|chr16:28938717-28938718|-/C|frameshift_variant', 'ENSG00000177455|ENST00000538922|CD19', 'nc|ENSG00000177455|P15391-2|CD19'] 69940 15925 LVKPYVKIL True PC9_epitope_Rep4 1071.7056028504699 1071.7045099358602 69.183 2 -0.7905917699490578 0.24465089272753665 1.0 ['ENSG00000265817|ENST00000481490|FSBP'] 116569 6623 TTYDYKADEKW True NCI_RA007_Epitope_Rep1 1418.6354105838195 1418.63430993586 29.775 2 -0.7906436676385713 0.24465089272753665 1.0 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L', 'nc|ENSG00000071537|Q9UBV2-2|SEL1L', 'ENST00000554744.1_1_14:81964730-81972475:-|nuORF'] 30412 7071 GAENPRPFSP True NCI_RA007_Epitope_Rep4 1070.5145076055 1070.5134099358602 33.822 2 -0.7906657780583384 0.24465089272753665 1.0 ['ENSG00000171992|ENST00000307662|SYNPO'] 43088 8609 IEVSFYMNK True PC9_epitope_Rep4 1129.5477818797299 1129.5461249037899 40.596 3 -0.7907300885858863 0.24468733670092319 1.0 ['ENST00000475375.1_1_13:53010343-53024741:-|nuORF'] 42588 12052 IEGAFRQGL True PC9_epitope_Rep6 989.5294293936499 989.52832993586 57.668 2 -0.7907386789198755 0.24468733670092319 1.0 ['ENSG00000051341|ENST00000264233|POLQ'] 100247 14272 SIYAREPVL True PC9_epitope_Rep4 1046.5760452328998 1046.57494993586 62.8 2 -0.7907664912474918 0.24469830026272626 1.0 ['ENST00000378535.4_1_12:88890181-88890376:-|nuORF'] 63416 10942 LLVNVLKA True NCI_RA007_Epitope_Rep3 868.57458868092 868.57348993586 50.126 2 -0.7908022494565637 0.24473504695278597 1.0 ['ENST00000206423.7_2_3:112318997-112319114:-|nuORF'] 99651 3773 SIFYFFKSFQY True NCI_RA007_Epitope_Rep2 1475.71253870571 1475.71090490379 19.317 3 -0.790807091762818 0.24473504695278597 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 19570 5650 ELQESSYSCE True H1975_Epitope_Rep2 1173.4495839600897 1173.4484899358602 26.731 2 -0.7908548092808819 0.24473504695278597 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 5683 7857 APAGPALAQ True PC9_epitope_Rep6 794.42865272322 794.42754993586 39.624 2 -0.7908668363720126 0.24473504695278597 1.0 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 46074 10607 ISGTVDMQSN True H1975_Epitope_Rep3 1050.46517445458 1050.4640699358602 45.868 2 -0.7909847483114422 0.24473504695278597 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 26817 4057 FLAMKWMITEC True NCI_RA007_Epitope_Rep1 1371.63892246659 1371.63727490379 19.837 3 -0.7909864870334653 0.24473504695278597 1.0 ['ENSG00000125445|ENST00000245539|MRPS7'] 69198 14378 LTSINSLP True PC9_epitope_Rep3 843.47018318203 843.46908993586 60.398 2 -0.7910780941874753 0.24477148372302288 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A', 'FAM135A|p.S926Ffs*3|1|0.11|ENSG00000082269|chr6:70525854-70525855|-/T|frameshift_variant'] 68595 8994 LTHLNNRR True NCI_RA007_Epitope_Rep1 1022.5733598943 1022.5722699358599 38.987 2 -0.7911216755990763 0.24477148372302288 1.0 ['nc|ENSG00000138430|Q9NTK5-3|OLA1'] 83009 10311 PSGTFLVRRHR True PC9_epitope_Rep3 1324.7476358581598 1324.74652993586 44.607 2 -0.7912137153671744 0.244771787243306 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 66701 12655 LSLEDISNDN True PC9_epitope_Rep2 1118.5091474415399 1118.50804993586 53.985 2 -0.7912162878531189 0.244771787243306 1.0 ['LRRIQ1|p.K419N|1|0.09|ENSG00000133640|chr12:85056050-85056050|G/T|missense_variant'] 56522 15527 LDFSGIEPDIK True H1975_Epitope_Rep1 1232.6288686513997 1232.6277699358602 64.999 2 -0.7912635983408693 0.244771787243306 1.0 ['ENSG00000147251|ENST00000276202|DOCK11', 'ENST00000553480.1_1_14:45334525-45334813:-|nuORF'] 105426 23235 SRTALLGTSLA True PC9_epitope_Rep2 1088.61897267404 1088.6178699358602 94.857 2 -0.7912844818755442 0.244771787243306 1.0 ['ENST00000513970.5_2_5:137673767-137673917:-|nuORF'] 94432 19265 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 79.958 2 -0.7913107701707485 0.24477209072835188 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 91283 13081 RGLYRCHRGP True PC9_epitope_Rep1 1213.62507819733 1213.6239899358602 55.183 2 -0.7913448289516146 0.24477209072835188 1.0 ['ENST00000588286.1_1_19:36036058-36036391:-|nuORF'] 113007 6129 TLMFDKESI True PC9_epitope_Rep6 1082.53179746242 1082.5307099358602 31.996 2 -0.7913480834222042 0.24477209072835188 1.0 ['ENST00000299638.7_2_15:58007640-58007844:+|nuORF'] 112006 11015 TIRSFEGI True PC9_epitope_Rep1 921.4919812557699 921.49088993586 47.257 2 -0.791356513126106 0.24477209072835188 1.0 ['ENSG00000158477|ENST00000289429|CD1A', 'CD1A|p.R90P|1|0.33|ENSG00000158477|chr1:158255294-158255294|G/C|missense_variant'] 75320 12254 NIMQHFNRYWK True NCI_RA007_Epitope_Rep2 1535.74558725283 1535.7444899358602 52.266 2 -0.7913928571478077 0.24477594613420015 1.0 ['ST8SIA3|p.V285F|1|0.08|ENSG00000177511|chr18:57357463-57357463|G/T|missense_variant'] 108137 18131 SYEMLIKEKSV True PC9_epitope_Rep3 1325.69008900897 1325.68843490379 74.941 3 -0.7913985469722028 0.24477594613420015 1.0 ['ENSG00000153147|ENST00000283131|SMARCA5', 'SMARCA5|p.F300Lfs*9|1|0.09|ENSG00000153147|chr4:143527965-143527966|-/ACATCACG|frameshift_variant'] 52 7843 AAAFPPGFSI True PC9_epitope_Rep3 976.5018176634799 976.50072993586 35.156 2 -0.7914079423295013 0.24477594613420015 1.0 ['ENSG00000117133|ENST00000370654|RPF1'] 63356 13457 LLTQYFQI True PC9_epitope_Rep6 1024.5593325395998 1024.55822993586 63.455 2 -0.7914408704933268 0.24478690522833138 1.0 ['ENST00000507447.1_1_5:54960464-54965471:-|nuORF'] 75592 8078 NLDLTPYIC True H1975_Epitope_Rep1 1050.50558271458 1050.5044899358602 36.015 2 -0.7915518622974891 0.24485590736280002 1.0 ['ENSG00000170236|ENST00000532404|USP50', 'nc|ENSG00000170236|Q70EL3|USP50'] 31216 3091 GCIVFHGIYVP True NCI_RA007_Epitope_Rep3 1203.61105084263 1203.6094049037902 17.268 3 -0.7915778961938557 0.24486686497859683 1.0 ['L1PA4_dup9334|chr12:12409221-12411354:-|1.3393414808808248|0.0111968938891953|6.9|450.0|97|2|anti-sense'] 109040 6973 TAILTGKPV True H1975_Epitope_Rep3 898.5487678558999 898.54766993586 31.783 2 -0.7916337784854633 0.2449068431133554 1.0 ['TMEM132B|p.G937Afs*35|1|0.09|ENSG00000139364|chr12:125654281-125654281|G/-|frameshift_variant', 'nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-2|TMEM132B', 'ENST00000534945.2_1_12:125834026-126068624:+|nuORF'] 60403 7853 LGTPGKKG True H1975_Epitope_Rep3 756.4493881678 756.44828993586 35.182 2 -0.7916546044516034 0.2449177996720693 1.0 ['ENSG00000188811|ENST00000379600|NHLRC3', 'ENST00000485407.1_1_13:39616195-39618420:+|nuORF'] 109042 9412 TAIQRALDE True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 41.543 2 -0.791757519137199 0.24498679590237674 1.0 ['ENST00000397040.5_1_20:37117115-37117187:+|nuORF'] 129339 24552 VRAAHLRL True NCI_RA007_Epitope_Rep3 934.58246802602 934.58136993586 106.22 2 -0.791777334239966 0.24498708685180348 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 97557 13543 SEESHEQF True H1975_Epitope_Rep2 991.38830403287 991.38720993586 57.23 2 -0.7917790078728805 0.24498708685180348 1.0 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS', 'ENST00000571885.1_1_17:79662737-79663393:+|nuORF'] 58227 7973 LELHWDFQSWV True H1975_Epitope_Rep3 1458.69320024346 1458.6921099358601 35.641 2 -0.7917929404444164 0.24498708685180348 1.0 ['nc|ENSG00000118454|Q8N6S4-2|ANKRD13C', 'ENSG00000118454|ENST00000370944|ANKRD13C'] 12646 8050 DLDEVARARRE True H1975_Epitope_Rep3 1328.6796754376398 1328.6785699358602 35.938 2 -0.7917943921905075 0.24498708685180348 1.0 ['nc|ENSG00000172428|Q8WXC6-1|COPS9'] 125436 25373 VITLTELTLI True PC9_epitope_Rep2 1114.68492697554 1114.68382993586 103.28 2 -0.7918224258655431 0.24501994922016684 1.0 ['ENST00000374721.7_1_10:35500449-35500728:+|nuORF'] 4975 15857 ALGSHDLQVT True PC9_epitope_Rep2 1039.52982331647 1039.5287299358602 66.252 2 -0.7918311768431295 0.24501994922016684 1.0 ['ENST00000489298.1_1_X:55187350-55187527:-|nuORF'] 125437 24641 VITLTELTLI True PC9_epitope_Rep4 1114.68492697554 1114.68382993586 103.27 2 -0.7918521063330279 0.24501994922016684 1.0 ['ENST00000374721.7_1_10:35500449-35500728:+|nuORF'] 30638 9747 GAKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 47.913 3 -0.7918727513593591 0.24503474589795296 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 116037 8888 TSNFDKEFTR True NCI_RA007_Epitope_Rep5 1243.5833154413099 1243.5822099358602 40.85 2 -0.7918801461695971 0.24503474589795296 1.0 ['nc|ENSG00000166501|P05771|PRKCB', 'ENST00000303531.11_2_16:24231131-24231431:+|nuORF'] 134576 12210 VYSEVHFTL True NCI_RA007_Epitope_Rep3 1093.54441075145 1093.5433099358602 55.166 2 -0.7918803355179673 0.24503474589795296 1.0 ['ENSG00000171992|ENST00000307662|SYNPO', 'nc|ENSG00000171992|Q8N3V7-3|SYNPO', 'nc|ENSG00000171992|Q8N3V7|SYNPO'] 127091 7023 VLTECARMHRP True H1975_Epitope_Rep3 1311.65399536711 1311.65288993586 31.977 2 -0.7919153338747588 0.24503474589795296 1.0 ['ENST00000530149.1_1_11:212394-212514:+|nuORF', 'ENST00000527039.1_1_11:209766-212514:+|nuORF', 'nc|ENSG00000177963|Q9NPQ8-2|RIC8A', 'nc|ENSG00000177963|Q9NPQ8-4|RIC8A', 'ENSG00000177963|ENST00000526104|RIC8A', 'nc|ENSG00000177963|Q9NPQ8-3|RIC8A'] 5155 15632 ALLRPQLA True PC9_epitope_Rep2 880.54943656224 880.54832993586 65.405 2 -0.7920413473096931 0.24514013810712007 1.0 ['ENST00000525455.5_1_11:62529053-62530037:+|nuORF', 'ENST00000301788.11_1_11:62529053-62530368:+|nuORF', 'ENST00000524819.5_1_11:62529062-62529592:+|nuORF'] 106023 10410 SSWDYRRAL True PC9_epitope_Rep4 1152.5676058075198 1152.56650993586 47.747 2 -0.7920582255115688 0.24514013810712007 1.0 ['AluSc_dup26247|chr14:55143427-55143722:-|2.329685434224244|0.0255733500930304|6.51|540.0|15|2|anti-sense'] 74562 15123 NFVGSNNLNL True PC9_epitope_Rep5 1090.54072235334 1090.5396299358601 63.177 2 -0.7920623973401376 0.24514013810712007 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 19126 5853 ELGPDGHPGP True PC9_epitope_Rep1 974.4457593393399 974.44466993586 27.327 2 -0.792092179274131 0.2451655955783152 1.0 ['ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-9|ITGA7'] 131697 8655 VTNLDKLPG True PC9_epitope_Rep1 955.5338460677499 955.53274993586 38.13 2 -0.7921097842762288 0.2451765456813764 1.0 ['NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 94442 20500 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 84.935 2 -0.792151001507971 0.24518393872577463 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 12200 12392 DIGAHVGPPR True PC9_epitope_Rep3 1017.5355774032499 1017.53448993586 52.695 2 -0.7921899956717832 0.24518393872577463 1.0 ['nc|ENSG00000142513|Q9BZG2-2|ACP4', 'ENSG00000142513|ENST00000270593|ACP4'] 39571 9189 HLHFKDDKTK True H1975_Epitope_Rep1 1267.66731984879 1267.6662299358602 40.252 2 -0.7921958643426362 0.24519488808622367 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF', 'nc|ENSG00000169689|A8MT69-3|CENPX', 'nc|ENSG00000169689|A8MT69-2|CENPX', 'ENST00000580090.5_1_17:79977083-79980595:-|nuORF', 'ENSG00000169689|ENST00000392359|CENPX', 'ENST00000584514.5_1_17:79977083-79980595:-|nuORF', 'ENST00000577379.5_1_17:79977117-79980595:-|nuORF'] 140452 26208 YRHRRKYF True H1975_Epitope_Rep3 1224.6628436050398 1224.6617499358601 109.22 2 -0.792210687996378 0.24520583712901448 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 14474 21114 DTFIEQILKN True H1975_Epitope_Rep3 1219.6448530687096 1219.6437499358601 88.193 2 -0.7923204307118723 0.24523129143155542 1.0 ['ENST00000466781.5_1_22:26864510-26877728:-|nuORF', 'ENST00000496385.5_1_22:26862186-26875401:-|nuORF', 'nc|ENSG00000100099|Q9NQG7-2|HPS4', 'nc|ENSG00000100099|Q9NQG7-3|HPS4', 'ENSG00000100099|ENST00000398145|HPS4', 'nc|ENSG00000100099|Q9NQG7-4|HPS4', 'ENST00000485842.5_1_22:26849853-26868905:-|nuORF'] 130479 7136 VSPPASPSP True H1975_Epitope_Rep2 837.42323298961 837.4226849679301 32.381 1 -0.792355303930511 0.2452567449956484 1.0 ['ENST00000355243.7_1_10:102587940-102588264:+|nuORF'] 89665 13348 QYVDFHNQL True PC9_epitope_Rep6 1162.54072235334 1162.5396299358601 63.004 2 -0.7923579562558295 0.24526057757857941 1.0 ['ENSG00000134899|ENST00000652225|ERCC5', 'ERCC5|p.L1088Ffs*11|1|0.11|ENSG00000134899|chr13:102875600-102875601|-/T|frameshift_variant', 'nc|ENSG00000134899|P28715-2|ERCC5'] 18516 11050 EKIARWEEWNK True NCI_RA007_Epitope_Rep1 1487.7521121019097 1487.75100993586 46.977 2 -0.7923920628657551 0.24526057757857941 1.0 ['ENSG00000140057|ENST00000267584|AK7'] 67335 12594 LSSETELQL True PC9_epitope_Rep3 1018.5182555732599 1018.51714993586 53.466 2 -0.7924017750448464 0.24526057757857941 1.0 ['ENST00000482587.5_3_1:179834498-179834546:-|nuORF'] 17964 5091 EIDEAKKK True NCI_RA007_Epitope_Rep3 959.52876068731 959.52766993586 27.017 2 -0.7924197446274924 0.24527152471571131 1.0 ['nc|ENSG00000239474|O60662-2|KLHL41', 'ENSG00000239474|ENST00000284669|KLHL41'] 91334 5893 RGRRWRRRRDR True PC9_epitope_Rep1 1624.9471725667597 1624.9460699358601 27.484 2 -0.7924516621327546 0.24529341803730456 1.0 ['ENST00000425427.6_1_5:153570544-153674427:+|nuORF'] 65725 8321 LSCLLGPMEG True H1975_Epitope_Rep2 1018.48273909502 1018.48164993586 36.959 2 -0.7924668369746978 0.24529341803730456 1.0 ['ENST00000478328.1_1_7:127231492-127231768:+|nuORF'] 122330 8060 VGCVCWARP True PC9_epitope_Rep3 989.4575274066898 989.45642993586 35.98 2 -0.7924912051962907 0.24532625563822535 1.0 ['ENST00000605589.1_1_1:184355274-184355667:-|nuORF'] 121623 19938 VFGTKLTP True PC9_epitope_Rep1 861.4960040070499 861.49490993586 81.512 2 -0.7924967747464031 0.24532625563822535 1.0 ['ENSG00000179817|ENST00000314254|MRGPRX4'] 91768 24815 RKFVGGPG True PC9_epitope_Rep4 816.4606215578398 816.46007496793 103.96 1 -0.792508734296643 0.24532625563822535 1.0 ['ENSG00000203740|ENST00000439373|NTMT2'] 15585 9436 EAQSSNFLFPK True H1975_Epitope_Rep3 1266.6244519772997 1266.62334993586 41.297 2 -0.7927022197888784 0.24542422044960116 1.0 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16'] 13574 13012 DPEEEEPVYI True PC9_epitope_Rep1 1218.5292141797797 1218.5281099358601 54.922 2 -0.7927277139343234 0.24543160459450053 1.0 ['nc|ENSG00000144460|Q9P242|NYAP2', 'ENSG00000144460|ENST00000272907|NYAP2'] 100039 12512 SIREQWWRWNR True H1975_Epitope_Rep1 1615.8120270198697 1615.81092993586 53.168 2 -0.792729777636856 0.24543160459450053 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 142191 13285 YVVDFLTEENK True NCI_RA007_Epitope_Rep1 1355.6608970556697 1355.65980993586 55.676 2 -0.7927573518901562 0.24544254782242977 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 47440 11558 IVLYALDRDP True H1975_Epitope_Rep3 1173.6393737654498 1173.63826993586 49.587 2 -0.7928034028364893 0.24546443332608223 1.0 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 129341 26177 VRAAHLRL True PC9_epitope_Rep5 934.58246802602 934.58136993586 106.41 2 -0.7928726544339928 0.24546443332608223 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 112046 7781 TISTEKPSI True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 35.302 2 -0.7929467472053845 0.24547537560183305 1.0 ['ZAN|p.E2695Rfs*83|1|0.75|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant', 'ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.A2019Pfs*35|1|0.1|ENSG00000146839|chr7:100775692-100775692|C/-|frameshift_variant', 'ZAN|p.Q2488Rfs*12|1|0.3|ENSG00000146839|chr7:100791044-100791044|C/-|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 120744 16572 VEKQLKLRERP True H1975_Epitope_Rep1 1394.83578215622 1394.83468993586 69.119 2 -0.7929709138150591 0.2454863175602187 1.0 ['ENST00000511562.5_1_4:164415926-164433975:+|nuORF'] 79435 6360 PATTTARL True PC9_epitope_Rep3 829.46576650793 829.46466993586 29.49 2 -0.7929897806306043 0.24549040078881734 1.0 ['ENSG00000132613|ENST00000338779|MTSS2'] 44920 8450 INSKSYVSPP True NCI_RA007_Epitope_Rep2 1090.56587447202 1090.56476993586 37.511 2 -0.7929967143279372 0.24549040078881734 1.0 ['nc|ENSG00000165309|Q5W041-3|ARMC3', 'nc|ENSG00000165309|Q5W041-4|ARMC3', 'ENSG00000165309|ENST00000298032|ARMC3'] 113319 18106 TLRKYGTL True PC9_epitope_Rep3 950.5549158654999 950.55380993586 74.84 2 -0.7930149923300887 0.24549040078881734 1.0 ['ENSG00000168769|ENST00000380013|TET2'] 38004 6454 HALNEVDPG True PC9_epitope_Rep5 950.4457593393399 950.44466993586 29.8 2 -0.7930277108710035 0.24549040078881734 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 111570 8074 TICLLGWSPPG True H1975_Epitope_Rep3 1142.57941636118 1142.57830993586 36.031 2 -0.7930326507146798 0.24549040078881734 1.0 ['ENST00000282516.12_2_5:36876878-36877172:+|nuORF'] 105137 25101 SRFIRLIPLG True PC9_epitope_Rep3 1170.7237125261 1170.7220549037902 101.9 3 -0.7930481810716542 0.24549040078881734 1.0 ['ENSG00000102104|ENST00000379984|RS1'] 98540 11935 SFNTNFNGN True PC9_epitope_Rep3 1013.42027286749 1013.4191699358599 50.93 2 -0.7930613844573229 0.24549040078881734 1.0 ['USP29|p.C232F|1|0.37|ENSG00000131864|chr19:57129370-57129370|G/T|missense_variant'] 69746 13968 LVFFFFFFLRQ True NCI_RA007_Epitope_Rep2 1509.8172785577697 1509.8161899358602 58.989 2 -0.7930781337280318 0.2454942218742297 1.0 ['ENST00000294008.3_1_16:3632019-3632346:-|nuORF'] 30116 8956 FYLNMYASIY True H1975_Epitope_Rep1 1283.58964669171 1283.58854993586 39.353 2 -0.7930788864272396 0.2454942218742297 1.0 ['GPR17|p.R333Afs*29|1|0.34|ENSG00000144230|chr2:127651647-127651647|C/-|frameshift_variant', 'ENSG00000144230|ENST00000486700|GPR17', 'nc|ENSG00000144230|Q13304|GPR17', 'ENST00000486700.1_1_2:128403737-128409326:+|nuORF'] 26763 4096 FKFCIFHP True H1975_Epitope_Rep2 1037.51569390581 1037.5145899358602 20.844 2 -0.7930798128198491 0.2454942218742297 1.0 ['ENST00000379520.7_1_2:30381839-30381956:+|nuORF'] 51015 568 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 3.0004 3 -0.7931562415609462 0.24551610143687744 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 44008 12223 IIGLELFKGKM-[Oxidation] True NCI_RA007_Epitope_Rep1 1263.7260809753097 1263.72498993586 51.514 2 -0.7931655681939783 0.24551610143687744 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 112421 6650 TLCWRPQVPGR True NCI_RA007_Epitope_Rep1 1311.6870097475498 1311.68536490379 29.879 3 -0.7932074520962774 0.24551636147477998 1.0 ['PGR|p.E47Kfs*119|1|0.15|ENSG00000082175|chr11:101128932-101128932|C/-|frameshift_variant'] 110431 7038 TEYSLREVP True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 32.036 2 -0.793224673712681 0.24551636147477998 1.0 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'ENST00000398197.6_1_6:121482190-121544486:-|nuORF', 'ENST00000464622.5_1_6:121513684-121545514:-|nuORF'] 132160 16659 VTVNSLGV True PC9_epitope_Rep5 787.44396843419 787.44286993586 69.086 2 -0.7932829410276829 0.24551636147477998 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 4394 19128 AINSSLSTL True NCI_RA007_Epitope_Rep2 904.4865615221601 904.48601496793 79.269 1 -0.7932933413355215 0.24551636147477998 1.0 ['ENSG00000237649|ENST00000428849|KIFC1'] 131969 5680 VTSDVLEQR True NCI_RA007_Epitope_Rep3 1045.54038800017 1045.53928993586 29.324 2 -0.7933265746012015 0.24552730014208252 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5'] 51016 823 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 4.3181 3 -0.7933801311865398 0.2455527364987314 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 13089 8421 DLQGERQEWKR True H1975_Epitope_Rep3 1443.72187460279 1443.72076993586 37.376 2 -0.7934214725776817 0.24556367432150314 1.0 ['ENSG00000163874|ENST00000373087|ZC3H12A'] 261 11012 AAGGPLYI True H1975_Epitope_Rep2 760.4119400299201 760.41139496793 47.385 1 -0.7934449578904734 0.24558910941328269 1.0 ['ENSG00000177000|ENST00000376590|MTHFR', 'nc|ENSG00000177000|P42898-2|MTHFR'] 105235 15802 SRIPFNQAL True PC9_epitope_Rep3 1044.5716285588 1044.5705299358601 65.937 2 -0.7935270175254882 0.24559648588700908 1.0 ['ENSG00000064703|ENST00000369702|DDX20', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 121069 23596 VEQWPLRRLKC True PC9_epitope_Rep3 1426.7867237888195 1426.78562993586 96.048 2 -0.7935412346410261 0.24559648588700908 1.0 ['ENST00000434410.5_2_3:50621362-50621554:+|nuORF'] 140996 6860 YSHRLEYFVFY True PC9_epitope_Rep3 1522.7245003717399 1522.72285490379 31.402 3 -0.7935794419690827 0.24560386193299605 1.0 ['ENST00000475263.1_1_10:96356750-96361376:+|nuORF'] 39303 10819 HIQAEVQL True PC9_epitope_Rep4 936.5028802926399 936.50178993586 49.374 2 -0.7935845410718412 0.24560386193299605 1.0 ['KIF19|p.P803Rfs*40|1|0.72|ENSG00000196169|chr17:74354260-74354261|CC/-|frameshift_variant', 'KIF19|p.G979Wfs*20|1|0.24|ENSG00000196169|chr17:74355247-74355248|-/G|frameshift_variant', 'ENSG00000196169|ENST00000389916|KIF19', 'nc|ENSG00000196169|Q2TAC6-3|KIF19', 'ENST00000359939.10_1_17:72322488-72347101:+|nuORF', 'nc|ENSG00000196169|Q2TAC6-2|KIF19', 'ENST00000547389.1_1_17:72322488-72347101:+|nuORF'] 28676 15857 FSPDRTLLA True PC9_epitope_Rep3 1018.54474510462 1018.54364993586 66.144 2 -0.7936101055894234 0.2456147980632629 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 25131 13740 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 60.077 2 -0.79362350514195 0.2456257338764623 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 100504 11464 SLARDLTPEL True PC9_epitope_Rep4 1113.60298825673 1113.60188993586 51.859 2 -0.7936725988446445 0.2456295480242368 1.0 ['ENST00000397898.7_1_21:46226476-46226551:-|nuORF'] 74685 24088 NGRIKQLRSET True PC9_epitope_Rep3 1300.7211463268 1300.72004993586 97.939 2 -0.7936950489894505 0.2456295480242368 1.0 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS'] 43987 6035 IIFAPCLL True NCI_RA007_Epitope_Rep5 888.51429692348 888.5131899358599 29.895 2 -0.7937033352106108 0.2456295480242368 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 74106 11289 NDSSLSHLP True PC9_epitope_Rep5 968.45632402304 968.45522993586 48.416 2 -0.7937815731874104 0.24563336184029338 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 51018 1291 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 6.7481 3 -0.7937930110455311 0.24563336184029338 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 129806 16821 VRRLPGGG True NCI_RA007_Epitope_Rep1 810.4824196315798 810.48132993586 69.56 2 -0.7937955176630866 0.24563336184029338 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 24691 20606 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.5424049679301 85.355 1 -0.793800749760233 0.24564073574814105 1.0 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 94251 18801 RRQRLGQSP True H1975_Epitope_Rep2 1096.6213727158797 1096.62026993586 78.068 2 -0.7938017032023378 0.24564073574814105 1.0 ['ENST00000451963.1_2_7:99816827-99817049:+|nuORF', 'ENST00000317271.2_1_7:99816887-99817430:+|nuORF'] 125847 8573 VLAGEARRAGP True NCI_RA007_Epitope_Rep2 1095.6148903531098 1095.61378993586 37.992 2 -0.7939644180608136 0.24568803084326174 1.0 ['ENST00000441800.5_1_2:190539201-190539381:+|nuORF'] 31534 3958 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 20.354 2 -0.793992873855178 0.24568803084326174 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 131626 10177 VTLSLLLGG True NCI_RA007_Epitope_Rep2 871.5378688190299 871.53676993586 44.174 2 -0.7940531608885038 0.24568803084326174 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 58030 6039 LEHTWRQLRRS True PC9_epitope_Rep2 1480.8011279829998 1480.79947490379 28.621 3 -0.7941305854403524 0.2456882808197339 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 94447 20932 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 86.657 2 -0.7941440096786468 0.2456882808197339 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 142192 18241 YVVGQALQL True PC9_epitope_Rep2 989.5545815123298 989.55348993586 75.483 2 -0.7941479318637207 0.2456882808197339 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 13587 11887 DPEYMVYMFK True H1975_Epitope_Rep1 1321.5722823754097 1321.57118993586 50.724 2 -0.794157986161249 0.2456882808197339 1.0 ['ENSG00000105679|ENST00000222286|GAPDHS'] 56936 10939 LDQLIKIH True H1975_Epitope_Rep1 978.5862159937801 978.58510993586 47.04 2 -0.7942856488634278 0.2457536231884058 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 117515 20831 TVRSKERTPVD True PC9_epitope_Rep1 1286.69426287262 1286.6931699358602 84.954 2 -0.7943343923668844 0.2457536231884058 1.0 ['ENSG00000158623|ENST00000425248|COPG2'] 85592 7913 QGGSKPRSRKD True NCI_RA007_Epitope_Rep3 1214.6479813865399 1214.6468899358601 38.237 2 -0.7943735768195375 0.24577548476855743 1.0 ['ENST00000335500.8_1_17:42478071-42478113:-|nuORF'] 94665 3786 RRWVCQRRCRH True NCI_RA007_Epitope_Rep1 1554.7997055976998 1554.79804490379 18.715 3 -0.7943833751248482 0.24577548476855743 1.0 ['PTGIS|p.L237Cfs*99|1|0.09|ENSG00000124212|chr20:49524204-49524204|G/-|frameshift_variant'] 102193 5020 SLRYHLERHHK True NCI_RA007_Epitope_Rep4 1474.7905632993 1474.78891490379 25.795 3 -0.7944112550072487 0.24578641508340218 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 51024 2134 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 11.046 3 -0.7945232646858437 0.2458227664661981 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 901 14932 ADLPHLQDSF True PC9_epitope_Rep5 1141.5403880001702 1141.53928993586 62.441 2 -0.7945454166386221 0.2458227664661981 1.0 ['ENSG00000149262|ENST00000534064|INTS4'] 16761 6555 EETLDEGPP True H1975_Epitope_Rep3 985.4240208352498 985.42292993586 30.176 2 -0.7945790612726333 0.24582657083236725 1.0 ['ENSG00000100442|ENST00000396062|FKBP3'] 58720 13671 LERSWHLL True PC9_epitope_Rep4 1052.5767139392399 1052.57560993586 60.477 2 -0.7945832145861853 0.24582657083236725 1.0 ['nc|ENSG00000204482|O00453-13|LST1', 'nc|ENSG00000204482|O00453-11|LST1'] 82073 13587 PMHLYCQKVP True PC9_epitope_Rep1 1214.5940208795 1214.5929299358602 57.118 2 -0.7946081227474107 0.24582657083236725 1.0 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3'] 59030 13237 LEVPQIQTRWK True NCI_RA007_Epitope_Rep1 1396.7826839542001 1396.7815899358602 55.488 2 -0.7946239908542749 0.2458270545960357 1.0 ['GRIK1|p.H130Q|1|0.34|ENSG00000171189|chr21:29689882-29689882|G/T|missense_variant'] 51026 2270 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 11.737 3 -0.7946406720860754 0.2458270545960357 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 99516 11315 SIDNYYRLVTT True H1975_Epitope_Rep1 1343.6721304457099 1343.6710299358601 48.501 2 -0.7946561788478717 0.2458270545960357 1.0 ['ENSG00000253537|ENST00000518325|PCDHGA7', 'nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7'] 132301 9965 VTWYKNQV True PC9_epitope_Rep4 1036.5341804209197 1036.53308993586 45.991 2 -0.7946592431673453 0.2458270545960357 1.0 ['ENSG00000101605|ENST00000356443|MYOM1', 'nc|ENSG00000101605|P52179-2|MYOM1'] 49595 9581 KFYREKEGKP True NCI_RA007_Epitope_Rep4 1280.6877209401996 1280.68662993586 43.693 2 -0.7946646152336216 0.2458270545960357 1.0 ['nc|ENSG00000261371|P16284-5|PECAM1', 'nc|ENSG00000261371|P16284-3|PECAM1', 'nc|ENSG00000261371|P16284-4|PECAM1', 'nc|ENSG00000261371|P16284-2|PECAM1', 'nc|ENSG00000261371|P16284-6|PECAM1', 'ENSG00000261371|ENST00000563924|PECAM1'] 23601 4833 EWERKYREWYE True NCI_RA007_Epitope_Rep2 1672.7634050616 1672.7617649037902 23.423 3 -0.7946667442481192 0.2458270545960357 1.0 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 64857 5044 LQDPVPKE True NCI_RA007_Epitope_Rep2 924.4916469026 924.49054993586 24.244 2 -0.7946721026425375 0.2458270545960357 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 45859 14539 ISDQEKEKEKE True PC9_epitope_Rep5 1361.6674389880898 1361.66578490379 60.922 3 -0.7946890797172483 0.2458270545960357 1.0 ['ENSG00000155761|ENST00000336338|SPAG17', 'SPAG17|p.Q1045Afs*3|1|0.19|ENSG00000155761|chr1:118040763-118040764|-/C|frameshift_variant', 'SPAG17|p.V1065*|1|0.21|ENSG00000155761|chr1:118039418-118039418|C/-|frameshift_variant'] 66601 13180 LSITNNPSAL True PC9_epitope_Rep4 1028.55022440788 1028.54912993586 58.595 2 -0.7947270178467521 0.24586007562696494 1.0 ['ENSG00000110851|ENST00000228437|PRDM4'] 28908 10204 FTDGSFTQP True H1975_Epitope_Rep1 998.4345259493 998.43342993586 44.19 2 -0.7947281821261167 0.24586007562696494 1.0 ['ENSG00000185010|ENST00000360256|F8'] 55698 5056 LALGTRTEYK True NCI_RA007_Epitope_Rep5 1150.6346227381798 1150.63297490379 26.147 3 -0.7947327669683107 0.24586007562696494 1.0 ['ENST00000527740.1_1_8:145998653-146003561:-|nuORF'] 26943 17818 FLDRLVDV True PC9_epitope_Rep2 975.5389314481899 975.53782993586 73.831 2 -0.7947342959203779 0.24586007562696494 1.0 ['ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1', 'ENST00000546727.5_1_12:113538464-113545121:-|nuORF'] 51027 2429 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 12.556 3 -0.794779827890402 0.24586007562696494 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 110462 12390 TFENYYRKQRK True H1975_Epitope_Rep3 1531.7895602397896 1531.7884699358601 52.846 2 -0.7948000804785765 0.24586007562696494 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 51028 2519 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 12.986 3 -0.7948528889354088 0.24586007562696494 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 107484 9335 SVMRQRKW True NCI_RA007_Epitope_Rep5 1089.5865674302897 1089.58597496793 42.549 1 -0.7949614423403333 0.2458964143426295 1.0 ['ENST00000479713.1_1_Y:15591430-15591511:-|nuORF'] 33698 10380 GLGWRPKVPWK True H1975_Epitope_Rep1 1322.7611606639796 1322.7600699358602 44.875 2 -0.7950092120085651 0.2458964143426295 1.0 ['ENSG00000088451|ENST00000261296|TGDS'] 30733 9302 GALKEKYL True H1975_Epitope_Rep1 920.5331177917599 920.53202993586 40.688 2 -0.7951277023166924 0.24592942403523005 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-4|PRDM16'] 123714 18344 VGREGRLP True NCI_RA007_Epitope_Rep4 882.5035489989798 882.5030049679301 79.362 1 -0.7951660401710373 0.24592942403523005 1.0 ['ENST00000243440.1_1_1:212870399-212873318:-|nuORF'] 68776 10467 LTLIYSQHHPL True H1975_Epitope_Rep2 1320.71902106848 1320.7173749037902 45.279 3 -0.7951922184122355 0.24592942403523005 1.0 ['ENST00000406172.6_1_22:19708391-19710534:+|nuORF'] 28320 11701 FRRHIRQHS True PC9_epitope_Rep1 1235.67480527107 1235.6731649037902 49.883 3 -0.7951988170741792 0.24592942403523005 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 98375 12799 SEYNWGGP True NCI_RA007_Epitope_Rep5 908.3664463894798 908.36534993586 55.911 2 -0.7952004019025524 0.24592942403523005 1.0 ['nc|ENSG00000142186|Q96KG9-3|SCYL1', 'nc|ENSG00000142186|Q96KG9-4|SCYL1', 'nc|ENSG00000142186|Q96KG9-2|SCYL1', 'ENSG00000142186|ENST00000270176|SCYL1', 'ENST00000534462.1_1_11:65305333-65305925:+|nuORF', 'ENST00000532290.1_1_11:65305356-65305680:+|nuORF'] 2446 9331 AEQKKWEEQHE True H1975_Epitope_Rep1 1440.66335666716 1440.66224993586 40.799 2 -0.7952106444247127 0.24592942403523005 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 91333 7423 RGRRWRRRRDR True NCI_RA007_Epitope_Rep5 1624.9471725667597 1624.9460699358601 35.23 2 -0.7952328561507243 0.24592942403523005 1.0 ['ENST00000425427.6_1_5:153570544-153674427:+|nuORF'] 67184 6208 LSRATLPPP True H1975_Epitope_Rep3 950.5549158654999 950.55380993586 28.892 2 -0.7952710846517843 0.24593678477272068 1.0 ['ENST00000418115.5_1_3:49449357-49449522:-|nuORF'] 46567 16454 ITAHHTEVLP True PC9_epitope_Rep4 1116.5927579262 1116.5916699358602 71.259 2 -0.7952836500831857 0.24593678477272068 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 90128 7419 REDDLDQLEFK True NCI_RA007_Epitope_Rep3 1406.6677733412596 1406.66666993586 36.308 2 -0.7953289427838546 0.24596219309046136 1.0 ['ENST00000334504.11_2_X:107464528-107554015:-|nuORF'] 129833 9787 VRRLVKILLLG True PC9_epitope_Rep6 1278.8863611770998 1278.8847149037902 48.095 3 -0.7953824242311959 0.24597311547598355 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 42568 20023 IEFGYWRRFQK True PC9_epitope_Rep2 1528.7939173442398 1528.79227490379 82.423 3 -0.7955026284735555 0.24602036530077204 1.0 ['ENST00000450453.6_2_1:163292714-163292795:+|nuORF'] 55871 20289 LAPVLSFSSL True PC9_epitope_Rep5 1032.58554728744 1032.5844499358602 83.091 2 -0.7955112263409034 0.24602036530077204 1.0 ['nc|ENSG00000187243|Q96JG8-3|MAGED4', 'ENST00000470594.5_1_X:51809762-51812242:-|nuORF'] 68695 18296 LTKKWLLEDFS True PC9_epitope_Rep4 1378.7496524904197 1378.74799490379 78.445 3 -0.7955251121106001 0.24602036530077204 1.0 ['ENSG00000170775|ENST00000303921|GPR37'] 11554 16163 DFSSYSHVEP True H1975_Epitope_Rep2 1166.48801807414 1166.4869299358602 67.383 2 -0.7955545932766709 0.24602772265755132 1.0 ['ENSG00000113722|ENST00000231656|CDX1'] 39305 8348 HIQKEDVP True PC9_epitope_Rep3 964.4977949121999 964.49668993586 37.08 2 -0.7955635080366227 0.24602772265755132 1.0 ['CON__P02662'] 57561 13051 LEDSESSYE True H1975_Epitope_Rep3 1057.40876469393 1057.4076699358602 55.44 2 -0.7956169413233792 0.24606761101937952 1.0 ['nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1'] 14878 9503 DWLVDRRHCSL True H1975_Epitope_Rep1 1398.6826526431 1398.6815499358602 41.473 2 -0.795711363235269 0.2461003693243537 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'ENST00000579853.5_1_17:46048512-46051060:+|nuORF', 'ENST00000581708.5_1_17:46048512-46051791:+|nuORF', 'ENST00000584063.5_1_17:46048512-46051888:+|nuORF', 'ENST00000584525.5_1_17:46048512-46051498:+|nuORF', 'ENST00000583182.5_1_17:46048501-46051888:+|nuORF'] 124017 10346 VGSGGEGALL True NCI_RA007_Epitope_Rep4 858.4446967101799 858.44414496793 46.652 1 -0.7957271535156456 0.2461003693243537 1.0 ['ENST00000409185.5_1_2:131808364-131808481:-|nuORF'] 94441 20415 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 84.591 2 -0.7957350982218299 0.2461003693243537 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 84071 7226 PVYYWHKLE True NCI_RA007_Epitope_Rep4 1233.61824439805 1233.6171499358602 34.427 2 -0.7957817231067867 0.2461077237244196 1.0 ['ENSG00000101842|ENST00000217957|VSIG1', 'nc|ENSG00000101842|Q86XK7-2|VSIG1'] 94453 21591 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 89.327 2 -0.795796215626775 0.2461077237244196 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 136524 14955 WWDIYYTLFEK True H1975_Epitope_Rep1 1562.7445671099797 1562.74346993586 62.765 2 -0.7958539623148961 0.2461331247827598 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 41201 15147 HVKMPPYER True PC9_epitope_Rep2 1155.5858987239496 1155.58426490379 63.521 3 -0.7958780219791463 0.24614404263638864 1.0 ['nc|ENSG00000144278|Q8IUC8-2|GALNT13'] 99725 6124 SIHYWDIRYKQ True NCI_RA007_Epitope_Rep1 1507.7571974823497 1507.75555490379 27.858 3 -0.7959070736537724 0.24614805375347543 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 123771 13257 VGRKIFPP True PC9_epitope_Rep2 912.5545219426798 912.55342993586 56.268 2 -0.7959085034458484 0.24614805375347543 1.0 ['ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 44933 7660 INVPVSLAT True PC9_epitope_Rep1 912.52803241132 912.52692993586 34.287 2 -0.7959154892683636 0.24614805375347543 1.0 ['ENST00000498666.5_1_21:46313282-46313576:-|nuORF'] 100746 13740 SLDYYNTCEYP True PC9_epitope_Rep1 1366.53873331766 1366.5376299358602 57.697 2 -0.7959326434206035 0.24614805375347543 1.0 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 13648 8994 DPNSPINAK True H1975_Epitope_Rep1 954.47705946762 954.47596993586 39.501 2 -0.7959329707968468 0.24614805375347543 1.0 ['ENSG00000073910|ENST00000542859|FRY', 'FRY|p.G2656Efs*66|1|0.1|ENSG00000073910|chr13:32267187-32267187|G/-|frameshift_variant'] 127382 13813 VNDLRYYRLC True PC9_epitope_Rep1 1313.65504091293 1313.65394993586 57.975 2 -0.7959382598450324 0.24614805375347543 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 85161 4371 QENHYTDRDYR True PC9_epitope_Rep6 1495.64401820491 1495.64236490379 23.907 3 -0.7959732155572344 0.24614805375347543 1.0 ['NSRP1|p.S494Ffs*22|1|0.05|ENSG00000126653|chr17:30185476-30185477|-/TTTATCATTATTT|frameshift_variant', 'ENSG00000126653|ENST00000247026|NSRP1'] 88771 8739 QTQCQRLLSTY True H1975_Epitope_Rep1 1339.6554348357497 1339.65432993586 38.543 2 -0.7959866254809432 0.24617345091735812 1.0 ['ENST00000561318.1_1_15:52311008-52311242:-|nuORF'] 45742 10340 IRYSFQVP True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.5386749679301 46.629 1 -0.7960651109761956 0.24622424303856122 1.0 ['nc|ENSG00000124731|Q9NP99-3|TREM1', 'ENST00000589882.1_1_6:41248622-41249060:-|nuORF'] 37639 18273 GVWKICPI True PC9_epitope_Rep5 914.5047948689398 914.50368993586 75.3 2 -0.7960695221469778 0.24622424303856122 1.0 ['ENSG00000142319|ENST00000270349|SLC6A3'] 27633 6948 FPCYAHVKASF True NCI_RA007_Epitope_Rep3 1268.60121443492 1268.60010993586 34.435 2 -0.7960776654411568 0.24623515783376773 1.0 ['ENSG00000004864|ENST00000265631|SLC25A13', 'nc|ENSG00000004864|Q9UJS0-2|SLC25A13'] 47739 13637 IYDYAIVLFK True NCI_RA007_Epitope_Rep1 1243.6852613287099 1243.6841699358602 57.055 2 -0.796100118529095 0.24624250673308043 1.0 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3', 'chr4:25782418-25788224|125|38.93|0.74|5.72|-|0|SEL1L3,SEL1L3|1'] 67705 10002 LSWPNDSAS True NCI_RA007_Epitope_Rep4 975.42977492203 975.42866993586 45.316 2 -0.7961273824147482 0.24624250673308043 1.0 ['ENST00000331772.8_1_10:90045168-90074247:-|nuORF'] 11350 7936 DENRSFEGTL True PC9_epitope_Rep2 1166.5203808315798 1166.5192899358601 35.892 2 -0.7961951710411985 0.24626433453029076 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000525040.5_1_11:9801967-9809483:-|nuORF'] 79494 4231 PCACCCCC True PC9_epitope_Rep5 804.15555102552 804.15444993586 21.347 2 -0.7962268545289051 0.24626433453029076 1.0 ['ENSG00000063515|ENST00000086933|GSC2'] 36559 5990 GVGYYSHEVGR True NCI_RA007_Epitope_Rep2 1222.5730851107799 1222.57198993586 27.91 2 -0.7962388166500104 0.24627524795482517 1.0 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 117798 9263 TVWLDLLK True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 40.542 2 -0.7962841771212573 0.24628616106333073 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'ENST00000595380.5_1_13:98996033-99036984:+|nuORF', 'ENST00000601853.5_1_13:98996033-99030171:+|nuORF'] 7063 3335 AQQQQQQWHLI True NCI_RA007_Epitope_Rep2 1406.7054962626598 1406.70385490379 17.635 3 -0.7962970981472396 0.24631155255042206 1.0 ['nc|ENSG00000285708|Q9H334-5|FOXP1'] 125734 19932 VKRRRWARP True NCI_RA007_Epitope_Rep2 1223.7475762885097 1223.7459449037901 82.531 3 -0.7963684435320947 0.2463407218659061 1.0 ['ENST00000472523.1_1_3:147111214-147111373:+|nuORF'] 68471 15460 LTFHIYCFYVY True H1975_Epitope_Rep3 1467.68969508615 1467.6885899358601 64.881 2 -0.7963759115824105 0.2463407218659061 1.0 ['ENSG00000007541|ENST00000321878|PIGQ', 'nc|ENSG00000007541|Q9BRB3|PIGQ'] 32695 16438 GGTDFPAAQT True PC9_epitope_Rep3 963.4297749220299 963.42922496793 68.366 1 -0.7963846652649694 0.2463407218659061 1.0 ['nc|ENSG00000144749|Q96JA1-2|LRIG1'] 92968 24668 RPKGKHALA True PC9_epitope_Rep4 976.5930327097199 976.5924849679301 103.38 1 -0.7964105393233482 0.2463407218659061 1.0 ['NUFIP2|p.S325L|1|0.09|ENSG00000108256|chr17:29287020-29287020|G/A|missense_variant'] 19716 7404 ELRRAAPGP True H1975_Epitope_Rep1 965.5406627836898 965.53956993586 33.483 2 -0.7965393746448153 0.24640597628595834 1.0 ['nc|ENSG00000163362|Q3KP66|INAVA', 'ENSG00000163362|ENST00000413687|INAVA'] 7681 13716 ASLGDRILL True PC9_epitope_Rep4 956.5654805492 956.56438993586 60.646 2 -0.7965567358815293 0.24640597628595834 1.0 ['ENST00000300403.10_1_20:30327313-30327367:+|nuORF'] 43035 9235 IETPPTRNIP True PC9_epitope_Rep1 1136.6189726740402 1136.6178699358602 40.374 2 -0.7966058336890983 0.2464133188563156 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'ENST00000531695.1_1_8:61769417-61773873:+|nuORF'] 11047 5920 DAVATYYLYMK True H1975_Epitope_Rep1 1336.63732516012 1336.63622993586 27.842 2 -0.7966182661029317 0.2464133188563156 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF'] 102333 10854 SLSSPRRNHET True NCI_RA007_Epitope_Rep2 1282.6378106256598 1282.6367099358602 46.824 2 -0.7966877509426883 0.24646072783069395 1.0 ['nc|ENSG00000175779|Q8NAA6|LINC02694'] 32538 25852 GGGGGCCCG True H1975_Epitope_Rep3 669.16690136125 669.16635496793 107.62 1 -0.7967184977964976 0.24646072783069395 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 114436 12046 TPVEEVEAL True H1975_Epitope_Rep3 985.4967918526899 985.49568993586 51.496 2 -0.7967471327866597 0.24646072783069395 1.0 ['ENSG00000107929|ENST00000316157|LARP4B'] 131896 14738 VTRLVYQVV True PC9_epitope_Rep5 1075.6389798426299 1075.6378899358601 61.689 2 -0.7967533711702682 0.24646072783069395 1.0 ['ENST00000222005.6_1_19:10501827-10502160:-|nuORF'] 42514 20139 IEELRVPSL True PC9_epitope_Rep5 1054.60225998074 1054.60116993586 82.512 2 -0.796761680350108 0.24646072783069395 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2'] 138099 6370 YGGLRGAI True PC9_epitope_Rep4 805.4446371405298 805.44354993586 31.585 2 -0.7967624967180151 0.24646072783069395 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 96768 5851 SAPERLLAT True NCI_RA007_Epitope_Rep3 956.5290950404799 956.52798993586 29.993 2 -0.7967730015745756 0.24646072783069395 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|22|1|sense'] 67181 21212 LSRARDWDWEK True H1975_Epitope_Rep1 1460.7160609463597 1460.7149699358602 88.131 2 -0.7968137467206157 0.24646806785941752 1.0 ['SLC32A1|p.A293D|1|0.13|ENSG00000101438|chr20:38727939-38727939|C/A|missense_variant'] 11572 10191 DFYEQNSR True NCI_RA007_Epitope_Rep1 1057.44648761533 1057.44538993586 43.652 2 -0.7968204384033145 0.24646806785941752 1.0 ['ENSG00000108784|ENST00000225927|NAGLU'] 74062 11045 NDNDDDNDDD True NCI_RA007_Epitope_Rep2 1165.32794817393 1165.32684993586 47.56 2 -0.7968388893868975 0.24649345009770574 1.0 ['ENST00000366930.8_1_1:218614709-218614793:+|nuORF'] 61496 6670 LKDQVGRDQF True H1975_Epitope_Rep1 1204.6200353031998 1204.61892993586 30.709 2 -0.7968599448679742 0.2465116952292728 1.0 ['nc|ENSG00000182732|P49758-12|RGS6', 'nc|ENSG00000182732|P49758-6|RGS6', 'nc|ENSG00000182732|P49758-11|RGS6', 'nc|ENSG00000182732|P49758-7|RGS6', 'nc|ENSG00000182732|P49758-10|RGS6', 'nc|ENSG00000182732|P49758-9|RGS6', 'nc|ENSG00000182732|P49758-16|RGS6', 'nc|ENSG00000182732|P49758-5|RGS6', 'nc|ENSG00000182732|P49758-8|RGS6', 'nc|ENSG00000182732|P49758|RGS6', 'nc|ENSG00000182732|P49758-13|RGS6', 'nc|ENSG00000182732|P49758-14|RGS6', 'nc|ENSG00000182732|P49758-15|RGS6', 'nc|ENSG00000182732|P49758-2|RGS6', 'ENSG00000182732|ENST00000553525|RGS6'] 92841 19864 RPDLLCQRR True H1975_Epitope_Rep2 1155.6294948714299 1155.62785490379 82.39 3 -0.7968643779873489 0.2465116952292728 1.0 ['ENST00000583283.1_1_17:61904916-61905045:+|nuORF'] 66271 19868 LSFGKAFECK True PC9_epitope_Rep1 1128.5637662970398 1128.5626699358602 81.24 2 -0.7968753343305234 0.2465116952292728 1.0 ['ENSG00000110455|ENST00000263776|ACCS', 'ENST00000527346.5_1_11:44101033-44105339:+|nuORF'] 102940 21728 SPDVMFDKI True PC9_epitope_Rep1 1050.50558271458 1050.5044899358602 88.408 2 -0.7968855563700464 0.24652260128240386 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'OTOF|p.D823Efs*3|1|0.24|ENSG00000115155|chr2:26477226-26477226|G/-|frameshift_variant', 'OTOF|p.R1068Pfs*78|1|0.26|ENSG00000115155|chr2:26474598-26474598|C/-|frameshift_variant'] 73134 9824 MRRAPTAWAA True PC9_epitope_Rep2 1129.58148204985 1129.5798449037902 43.123 3 -0.7969377935399777 0.24657692864379793 1.0 ['ENST00000424347.6_2_9:80851018-80851090:+|nuORF'] 25689 5668 FEQKYNFRFEE True H1975_Epitope_Rep1 1535.7044932031502 1535.70283490379 26.871 3 -0.7970038708701362 0.24661678076739374 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 88735 18458 QTITKQYYRR True PC9_epitope_Rep5 1355.73098273451 1355.72988993586 76.02 2 -0.7970175937425183 0.24662411532282574 1.0 ['nc|ENSG00000139998|P59190-2|RAB15', 'ENSG00000139998|ENST00000533601|RAB15'] 46807 4312 ITGWSEPFPP True H1975_Epitope_Rep2 1129.54441075145 1129.5427649037902 21.697 3 -0.7970248597639573 0.24662411532282574 1.0 ['ENSG00000106128|ENST00000326139|GHRHR'] 23223 6590 EVMLRCWQEKP True H1975_Epitope_Rep1 1417.6846267890496 1417.6835299358602 30.409 2 -0.7970397598194704 0.24664949199641067 1.0 ['ENSG00000135605|ENST00000381501|TEC'] 60450 13555 LGVTEAFK True PC9_epitope_Rep3 863.4752685624699 863.47416993586 57.194 2 -0.7971037287257563 0.2467040043994848 1.0 ['ENST00000450663.1_1_1:173111181-173111367:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'nc|ENSG00000125166|P00505-2|GOT2'] 41961 16369 IDEIAAQAETM True H1975_Epitope_Rep2 1190.5489040785399 1190.5478099358602 68.184 2 -0.7971438191936948 0.2467040043994848 1.0 ['ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant'] 93542 5903 RQLFKHWKFF True PC9_epitope_Rep6 1435.7877097649896 1435.78606490379 30.972 3 -0.7971742558499616 0.2467040043994848 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 136152 17449 WRRHCKKYWLI True PC9_epitope_Rep3 1587.8608917885897 1587.8592449037899 72.292 3 -0.7972000472523274 0.2467040043994848 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 6300 13527 APRLPHPAA True PC9_epitope_Rep4 928.52428444356 928.52318993586 59.927 2 -0.7972019216053944 0.2467040043994848 1.0 ['nc|ENSG00000182257|Q9NV39|PRR34'] 46512 18145 ISWVNNLEV True PC9_epitope_Rep5 1072.55530978832 1072.5542099358602 74.804 2 -0.7972567556971469 0.24671490593342982 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENST00000438277.5_1_2:128855105-128928859:+|nuORF'] 30766 7211 GALRRWKENTM True NCI_RA007_Epitope_Rep2 1360.7033880876797 1360.70173490379 32.668 3 -0.7973557104046076 0.24673670805475964 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'ENST00000488883.5_1_22:32000303-32002470:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1'] 102050 4819 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 23.406 3 -0.7973742322851608 0.24673670805475964 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 119389 10909 VAPQEKSLP True PC9_epitope_Rep3 967.5338460677499 967.53274993586 46.942 2 -0.7974585919540185 0.2467586965329629 1.0 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97'] 70112 10385 LVPELQAT True PC9_epitope_Rep1 869.4858332461699 869.48472993586 44.829 2 -0.7974589763417923 0.2467586965329629 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 118061 13966 TYGEIFEKF True NCI_RA007_Epitope_Rep2 1132.54407639828 1132.5429699358601 58.981 2 -0.7975114325676439 0.2467586965329629 1.0 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000151366|O95298-2|NDUFC2'] 101603 15047 SLLQKHHL True PC9_epitope_Rep5 974.56614925554 974.56504993586 62.883 2 -0.7975299495261541 0.2467586965329629 1.0 ['ENST00000486166.1_1_X:16875796-16876897:-|nuORF'] 129811 17024 VRRLPGGG True NCI_RA007_Epitope_Rep5 810.4824196315798 810.48132993586 72.244 2 -0.7975303399010423 0.2467586965329629 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 92661 24435 RNLRVHRV True H1975_Epitope_Rep1 1048.6366288572 1048.6355299358602 101.3 2 -0.797554757622656 0.2467586965329629 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 118989 9236 VAELLEPP True PC9_epitope_Rep1 866.4749342092999 866.47382993586 40.378 2 -0.7976106515319237 0.24678406575120462 1.0 ['ENSG00000101577|ENST00000677752|LPIN2'] 120344 12134 VEEEKEPVP True PC9_epitope_Rep1 1054.51825557326 1054.51714993586 51.536 2 -0.7976669376059441 0.2468094342352771 1.0 ['ENSG00000175467|ENST00000312397|SART1'] 4274 7425 AIFYQVVRRNR True NCI_RA007_Epitope_Rep5 1420.8051507342796 1420.8040499358601 35.238 2 -0.7976945009680732 0.24682033250857316 1.0 ['NAT1|p.D57Y|1|0.13|ENSG00000171428|chr8:18222216-18222216|G/T|missense_variant'] 56383 14223 LDDSALYLSDK True PC9_epitope_Rep5 1238.60304782638 1238.6019499358601 59.715 2 -0.7978034781713782 0.24682784264363325 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 79205 15556 PAPGLRPEEAP True H1975_Epitope_Rep2 1132.58767254576 1132.58656993586 64.992 2 -0.797806568682197 0.24682784264363325 1.0 ['ENSG00000164379|ENST00000296839|FOXQ1'] 33480 10007 GLATPPGHPV True NCI_RA007_Epitope_Rep3 944.5079656730799 944.50686993586 46.455 2 -0.7978200256014842 0.24682784264363325 1.0 ['ENST00000463515.1_1_10:103339125-103339206:-|nuORF'] 41245 21440 HVLQPQLPPP True PC9_epitope_Rep3 1124.6342288153598 1124.63312993586 87.76 2 -0.7978899611179111 0.24682784264363325 1.0 ['ENSG00000197576|ENST00000360046|HOXA4'] 30919 9013 GAQRTPGPEL True PC9_epitope_Rep5 1024.5301576696397 1024.5290699358602 39.614 2 -0.7978993476139435 0.24682784264363325 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 45918 14694 ISEEKYIEQFR True H1975_Epitope_Rep3 1440.7248942945596 1440.7237899358602 61.892 2 -0.7979459125304947 0.24682784264363325 1.0 ['GSAP|p.C367Lfs*10|1|0.46|ENSG00000186088|chr7:77355575-77355576|-/A|frameshift_variant', 'nc|ENSG00000186088|A4D1B5-3|GSAP', 'nc|ENSG00000186088|A4D1B5-2|GSAP', 'ENSG00000186088|ENST00000257626|GSAP', 'ENST00000334003.11_1_7:76959552-77026708:-|nuORF'] 13462 7068 DNENSPEIPV True NCI_RA007_Epitope_Rep1 1112.49858275784 1112.4974899358601 31.487 2 -0.798031902035938 0.24685320755808907 1.0 ['PLXNA2|p.Y1854Lfs*6|1|0.42|ENSG00000076356|chr1:208028034-208028038|GAGTA/-|frameshift_variant', 'ENSG00000076356|ENST00000367033|PLXNA2'] 129805 16396 VRRLPGGG True H1975_Epitope_Rep3 810.4824196315798 810.48132993586 68.54 2 -0.7980499787860463 0.24685338965886403 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 129803 16465 VRRLPGGG True H1975_Epitope_Rep2 810.4824196315798 810.48132993586 68.552 2 -0.7981284793256428 0.24685338965886403 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 45755 5026 ISAGGYIK True PC9_epitope_Rep4 807.44905381463 807.44794993586 25.96 2 -0.7981464553732847 0.24685338965886403 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 18237 10372 EIPDGQITVG True H1975_Epitope_Rep3 1027.51858992643 1027.51748993586 44.95 2 -0.7981707291935276 0.24685338965886403 1.0 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF'] 17765 10113 EHSIKVSV True PC9_epitope_Rep5 897.49198125577 897.49088993586 43.885 2 -0.7982480977132002 0.24687875236896548 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 13584 6892 DPERSAAPRRR True H1975_Epitope_Rep1 1309.6963285612899 1309.6952299358602 31.551 2 -0.7983067695193925 0.2469114370859011 1.0 ['ENST00000313565.10_1_16:71898855-71918020:-|nuORF', 'ENST00000568961.5_1_16:71915334-71918023:-|nuORF'] 3253 13371 AGEYTIVVLN True PC9_epitope_Rep4 1077.5706254992897 1077.5695299358601 59.336 2 -0.7983104887691254 0.2469114370859011 1.0 ['TTN|p.R1159L|1|0.53|ENSG00000155657|chr2:178781168-178781168|C/A|missense_variant'] 15397 14735 EAILDITD True PC9_epitope_Rep1 888.44402800384 888.44292993586 61.497 2 -0.7983254021239131 0.2469114370859011 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 131967 6381 VTSDIAQR True PC9_epitope_Rep5 888.4664947839199 888.46538993586 29.522 2 -0.7983875836466967 0.24691875940284688 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644', 'ZNF644|p.M556I|1|0.46|ENSG00000122482|chr1:90939686-90939686|C/G|missense_variant', 'ZNF644|p.I882Mfs*40|1|0.08|ENSG00000122482|chr1:90938654-90938708|CTGACCTTCCACTTTGCTCTTAAATAAAGGGAATAAATTTACATGCTCTTGATTA/-|frameshift_variant'] 63373 16326 LLVCFWGH True PC9_epitope_Rep4 973.4843937775299 973.48328993586 70.761 2 -0.7983960571970725 0.24691875940284688 1.0 ['ENST00000568717.1_1_16:74334023-74334994:+|nuORF'] 24984 15412 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 64.693 2 -0.7984638878667225 0.24692608129610877 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 56725 8470 LDLENDKQQLD True NCI_RA007_Epitope_Rep2 1329.6412242402498 1329.6401299358602 37.59 2 -0.7984940862240125 0.24692608129610877 1.0 ['ENSG00000109063|ENST00000583535|MYH3'] 140648 22966 YRSRRRYSWRR True PC9_epitope_Rep6 1640.8872576487997 1640.8861699358602 101.44 2 -0.7985259448182538 0.24693697472913745 1.0 ['ENST00000491215.1_1_6:32163881-32163974:-|nuORF'] 2780 6309 AETTGKFEDR True NCI_RA007_Epitope_Rep3 1152.54111627616 1152.54000993586 31.819 2 -0.7986146736057271 0.24699126309089858 1.0 ['nc|ENSG00000135083|Q8IV13|CCNJL'] 131587 25485 VTLIVSVLTV True PC9_epitope_Rep1 1042.6637976081402 1042.66327496793 103.02 1 -0.7986881915176218 0.24701662013799489 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 138785 2548 YITWTYFFR True NCI_RA007_Epitope_Rep4 1295.6338944621898 1295.63224490379 14.314 3 -0.7987881840926001 0.24705644111435762 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 10560 7507 CMDMRKRFCYR True NCI_RA007_Epitope_Rep1 1507.6668856332699 1507.6652249037902 33.193 3 -0.7988056326270636 0.24706018485036957 1.0 ['FBN2|p.S1738R|1|0.29|ENSG00000138829|chr5:128309386-128309386|G/T|missense_variant'] 65293 3828 LQYRRLRKGY True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 18.895 3 -0.7988140356649535 0.24706018485036957 1.0 ['ENSG00000080166|ENST00000377028|DCT', 'nc|ENSG00000080166|P40126-2|DCT'] 33928 4869 GLRLPLPQEL True NCI_RA007_Epitope_Rep3 1134.67609362734 1134.6744449037901 26.137 3 -0.7988289378208141 0.24706018485036957 1.0 ['ENST00000470907.6_1_2:74760550-74760706:-|nuORF'] 34333 5477 GPAVGDAPAP True H1975_Epitope_Rep3 850.4184819623399 850.41738993586 26.12 2 -0.7988383166422478 0.2470710752408227 1.0 ['ENSG00000105514|ENST00000222120|RAB3D'] 129802 16407 VRRLPGGG True H1975_Epitope_Rep1 810.4824196315798 810.48132993586 68.47 2 -0.7989016034656479 0.247081965316247 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 44487 22441 ILLFRRPLPK True PC9_epitope_Rep4 1251.8179472641098 1251.81631490379 94.552 3 -0.7989760664444636 0.2471146336524833 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 129809 17410 VRRLPGGG True NCI_RA007_Epitope_Rep3 810.4824196315798 810.48132993586 76.387 2 -0.7989764340165308 0.2471146336524833 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 23392 5597 EVSARSPVP True H1975_Epitope_Rep3 940.4977949121999 940.49668993586 26.569 2 -0.7989801122759584 0.2471146336524833 1.0 ['ENST00000317204.10_1_11:1297899-1298181:-|nuORF'] 134120 5769 VYLAEKGEND True NCI_RA007_Epitope_Rep5 1136.5349682665599 1136.53333490379 28.878 3 -0.7989975696888888 0.24712194839754714 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 37622 17579 GVVVITLP True PC9_epitope_Rep1 796.5058404147599 796.50474993586 72.409 2 -0.7990284064050918 0.24712194839754714 1.0 ['ENSG00000197233|ENST00000335302|OR1J2'] 104383 6901 SQKILGPFLK True NCI_RA007_Epitope_Rep5 1129.68593003505 1129.68427490379 33.227 3 -0.7990532539819015 0.2471617615156555 1.0 ['ENST00000555044.5_2_14:74364914-74371672:+|nuORF'] 83605 23368 PVCVLLAWV True PC9_epitope_Rep4 998.5623097450598 998.56120993586 98.141 2 -0.7991099223431223 0.24717281272595806 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-3|SLC8A3'] 37281 5221 GVRSVNGL True PC9_epitope_Rep2 800.4504507969599 800.44934993586 25.472 2 -0.7991572569305543 0.24717281272595806 1.0 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 120798 15009 VELHIGKVV True PC9_epitope_Rep5 992.6018660579199 992.60076993586 62.735 2 -0.7991586511450053 0.24717281272595806 1.0 ['ENSG00000086967|ENST00000357701|MYBPC2', 'MYBPC2|p.P639Qfs*37|1|0.15|ENSG00000086967|chr19:50454269-50454269|C/-|frameshift_variant'] 118485 8303 TYPSEDFDLP True NCI_RA007_Epitope_Rep3 1182.50808481238 1182.50698993586 39.779 2 -0.7991758744896168 0.24717281272595806 1.0 ['nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1', 'ENST00000555945.1_1_14:45431624-45465140:+|nuORF'] 124188 10734 VGSYSAGF True PC9_epitope_Rep1 786.35481907662 786.35372993586 46.176 2 -0.7991857351619543 0.24717281272595806 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 15261 6919 EAEQQQLIDDH True NCI_RA007_Epitope_Rep4 1324.58952302056 1324.5884299358602 33.233 2 -0.7992094446115866 0.2471801249421564 1.0 ['ENSG00000166165|ENST00000348956|CKB', 'ENSG00000237289|ENST00000441322|CKMT1B', 'ENSG00000223572|ENST00000413453|CKMT1A', 'nc|ENSG00000237289|P12532-2|CKMT1A'] 122329 7970 VGCVCWARP True PC9_epitope_Rep3 989.4575274066898 989.45642993586 35.633 2 -0.7992134197686716 0.2471801249421564 1.0 ['ENST00000605589.1_1_1:184355274-184355667:-|nuORF'] 19239 9585 ELISVSKVHPS True NCI_RA007_Epitope_Rep1 1194.66083748602 1194.6597499358602 41.282 2 -0.7992279393155498 0.2471802880444213 1.0 ['STAT1|p.E711K|1|0.3|ENSG00000115415|chr2:190975816-190975816|C/T|missense_variant'] 55023 24880 KYRNLKRKLKF True PC9_epitope_Rep2 1492.9354366278396 1492.9343299358602 101.37 2 -0.7992416322071196 0.2471802880444213 1.0 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E', 'ENST00000380503.7_1_16:30007553-30007939:+|nuORF', 'ENST00000568043.5_1_16:30007580-30007859:+|nuORF'] 86816 6252 QLPPWSFAP True PC9_epitope_Rep1 1041.5283667644899 1041.5272699358602 28.861 2 -0.7992669722477147 0.2471802880444213 1.0 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 126224 5050 VLGNGKGI True NCI_RA007_Epitope_Rep5 756.4493881678 756.44828993586 26.124 2 -0.7992793536307452 0.2471802880444213 1.0 ['ENSG00000147912|ENST00000432825|FBXO10', 'nc|ENSG00000147912|Q9UK96-2|FBXO10', 'ENST00000541804.1_1_9:37512546-37588833:-|nuORF', 'ENST00000543968.5_1_9:37521875-37532049:-|nuORF'] 21989 9983 ESFVSEIVGY True H1975_Epitope_Rep1 1128.5339056373998 1128.53280993586 43.334 2 -0.7993412387686273 0.24719117370620472 1.0 ['ENSG00000179148|ENST00000448843|ALOXE3', 'nc|ENSG00000179148|Q9BYJ1-2|ALOXE3'] 74033 5404 NDISQLRIS True H1975_Epitope_Rep3 1044.55637241748 1044.55526993586 25.848 2 -0.7994625072685545 0.24724543798259058 1.0 ['ENST00000609154.1_1_20:5988006-5996237:+|nuORF'] 62208 13590 LLESHSSKL True PC9_epitope_Rep4 1012.55530978832 1012.55420993586 60.167 2 -0.7995550646462536 0.2472707818215995 1.0 ['nc|ENSG00000141314|P58872-3|RHBDL3', 'ENSG00000141314|ENST00000269051|RHBDL3'] 12108 12286 DIAQSRVEI True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 52.111 2 -0.7996282397039978 0.24731058415268942 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF', 'ENST00000512792.2_1_12:112191278-112193633:+|nuORF'] 105544 14680 SSCGYGGG True NCI_RA007_Epitope_Rep5 686.23298969178 686.2324449679301 63.136 1 -0.7996415576955248 0.2473214673009355 1.0 ['KRT9|p.S51C|1|0.48|ENSG00000171403|chr17:41571842-41571842|T/A|missense_variant'] 27278 11586 FLQKHLDL True H1975_Epitope_Rep2 1012.57056592964 1012.56946993586 49.63 2 -0.7996710576252306 0.2473287740554921 1.0 ['ENSG00000158006|ENST00000374282|PAFAH2'] 33407 8460 GLADRCPAL True PC9_epitope_Rep2 914.4643866089399 914.46328993586 37.909 2 -0.7996831831796362 0.2473287740554921 1.0 ['ENSG00000107872|ENST00000369956|FBXL15'] 19121 19613 ELGNYVIKI True PC9_epitope_Rep1 1047.59644632431 1047.5953499358602 80.271 2 -0.7997637414388145 0.24736499674690957 1.0 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000497765.1_1_3:183515808-183519351:+|nuORF'] 98493 8271 SFKFLGSSSP True H1975_Epitope_Rep3 1055.52876068731 1055.52766993586 36.796 2 -0.7997769331986716 0.24736499674690957 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 31282 7923 GDIEIGSHR True H1975_Epitope_Rep1 982.48320747722 982.48210993586 35.427 2 -0.7998800676645652 0.24740121734353088 1.0 ['ENSG00000185950|ENST00000375856|IRS2'] 68981 4849 LTPLHCGA True PC9_epitope_Rep4 810.40580910366 810.40470993586 25.238 2 -0.7999066001070372 0.24740121734353088 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'ANK3|p.G1118Sfs*29|1|0.07|ENSG00000151150|chr10:60088311-60088335|TAATCCTGCAGATACGCTTTTTCCC/-|frameshift_variant'] 55421 10427 LAEYSIQPFF True NCI_RA007_Epitope_Rep2 1213.6019256275697 1213.60082993586 45.15 2 -0.7999092593783125 0.247412098080037 1.0 ['SLC7A13|p.F300Lfs*5|1|0.51|ENSG00000164893|chr8:86217749-86217749|A/-|frameshift_variant', 'nc|ENSG00000164893|Q8TCU3-2|SLC7A13', 'ENSG00000164893|ENST00000297524|SLC7A13'] 20008 13192 ELYFFHELSP True PC9_epitope_Rep1 1280.607739284 1280.60664993586 55.606 2 -0.799941154929528 0.24743028147634125 1.0 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 100814 14540 SLEKEKTL True PC9_epitope_Rep1 946.53351171458 946.53240993586 60.752 2 -0.7999450067200129 0.24743028147634125 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 26614 23219 FILILTVYTFK True PC9_epitope_Rep2 1356.8057108145597 1356.80460993586 94.793 2 -0.7999505898976677 0.24743028147634125 1.0 ['ENST00000478361.6_1_10:94234505-94239065:-|nuORF'] 100250 7381 SIYDTKRNEK True H1975_Epitope_Rep1 1252.6411646706 1252.63951490379 33.395 3 -0.7999577405315661 0.24744116116347656 1.0 ['nc|ENSG00000159625|Q8IY82-2|DRC7', 'ENSG00000159625|ENST00000360716|DRC7'] 129812 18074 VRRLPGGG True NCI_RA007_Epitope_Rep5 810.4824196315798 810.48132993586 76.32 2 -0.8000374213745474 0.24746291959406713 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 94030 17615 RRKQPLHP True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 77.244 2 -0.8000573023520982 0.24746291959406713 1.0 ['nc|ENSG00000152669|P22674-2|CCNO', 'ENSG00000152669|ENST00000282572|CCNO'] 127757 9329 VPCKTLGP True PC9_epitope_Rep5 813.4418602592099 813.44076993586 40.837 2 -0.8000924082534479 0.24746664353759198 1.0 ['ENST00000392144.5_1_19:38145708-38146127:-|nuORF'] 23404 12939 EVSNRFSGVP True PC9_epitope_Rep2 1090.5407223533398 1090.5396299358601 55.065 2 -0.8000977575363676 0.24746664353759198 1.0 ['nc|ENSG00000243264|A0A075B6S2|IGKV2D-29', 'nc|ENSG00000211623|A0A0A0MRZ7|IGKV2D-26'] 122554 14745 VGEYNSALP True PC9_epitope_Rep2 948.4552613938798 948.45416993586 61.984 2 -0.8001041155042445 0.24746664353759198 1.0 ['ENSG00000119041|ENST00000263956|GTF3C3'] 41813 12965 IATGGIIDPV True PC9_epitope_Rep4 954.5385970950199 954.53750993586 57.763 2 -0.8001431392040876 0.247502854912618 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'ENSG00000261150|ENST00000615648|EPPK1'] 103535 13879 SPRRGGPA True PC9_epitope_Rep4 796.4303840587198 796.42928993586 61.286 2 -0.8002281365860102 0.247502854912618 1.0 ['EARS2|p.G478Efs*8|1|0.12|ENSG00000103356|chr16:23525301-23525302|-/CC|frameshift_variant', 'ENSG00000103356|ENST00000449606|EARS2', 'nc|ENSG00000103356|Q5JPH6-2|EARS2', 'ENST00000564461.5_1_16:23555833-23563620:-|nuORF', 'EARS2-VMP1|1|fusion'] 138264 7578 YHAADLSL True PC9_epitope_Rep2 888.43413202648 888.43302993586 34.518 2 -0.8002638499531246 0.24752818733738075 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 61543 17897 LKGLRMRAF True NCI_RA007_Epitope_Rep5 1090.64335403042 1090.64224993586 75.635 2 -0.8003009481856959 0.24753190812771925 1.0 ['ENST00000555122.1_1_14:105422938-105423841:-|nuORF'] 83692 21089 PVFKPFEKP True PC9_epitope_Rep2 1087.6066170851898 1087.6055299358602 86.576 2 -0.8003433864847286 0.24753190812771925 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET'] 69468 13225 LVAERDIWSSA True PC9_epitope_Rep4 1245.63535101417 1245.6337049037902 58.765 3 -0.8003515652108948 0.24753190812771925 1.0 ['AXDND1|p.W459Lfs*7|1|0.18|ENSG00000162779|chr1:179430493-179430494|-/T|frameshift_variant', 'ENSG00000162779|ENST00000367618|AXDND1', 'nc|ENSG00000162779|Q5T1B0-2|AXDND1', 'ENST00000461179.2_1_1:179339175-179437601:+|nuORF'] 136204 22779 WRRWRILFKMG True NCI_RA007_Epitope_Rep1 1547.8659771690297 1547.86432490379 93.441 3 -0.8003960131612143 0.24755723866790008 1.0 ['ENST00000467566.1_1_2:109065689-109066146:+|nuORF', 'ENST00000478207.1_1_2:109065689-109068870:+|nuORF', 'ENST00000309863.10_1_2:109065689-109067532:+|nuORF'] 113169 9526 TLPRGYCITWL True NCI_RA007_Epitope_Rep2 1321.68527841205 1321.68418993586 41.668 2 -0.8004183635916756 0.2475825684758257 1.0 ['ENST00000299240.10_1_11:43413485-43418328:+|nuORF', 'ENST00000526774.5_1_11:43418220-43418328:+|nuORF'] 131519 14833 VTKMKMQRTIV True PC9_epitope_Rep5 1333.75739780649 1333.75576490379 62.057 3 -0.8004308251955105 0.24760431873039732 1.0 ['ENSG00000142534|ENST00000270625|RPS11'] 10494 21443 CITPKRRLTR True PC9_epitope_Rep3 1242.7342942931398 1242.73264490379 87.772 3 -0.8004479010079635 0.24760431873039732 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 55835 6481 LAPLCWPPT True NCI_RA007_Epitope_Rep2 996.5102741722 996.50916993586 29.819 2 -0.8004694656499591 0.24762964675955368 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 61336 3556 LISCAKCCV True NCI_RA007_Epitope_Rep2 938.4387661080599 938.43766993586 18.481 2 -0.800486082732718 0.24764781546732956 1.0 ['ENST00000438023.5_2_9:6982745-7014111:+|nuORF', 'nc|ENSG00000293552|Q9H3R0-3|KDM4C', 'nc|ENSG00000293552|Q9H3R0-4|KDM4C', 'nc|ENSG00000293552|Q9H3R0-2|KDM4C', 'ENSG00000107077|ENST00000381309|KDM4C'] 129922 17461 VRSVRGGGV True H1975_Epitope_Rep1 885.5144480358498 885.51334993586 72.651 2 -0.8005125769426352 0.24764781546732956 1.0 ['ENST00000566203.6_1_20:33859916-33865902:-|nuORF'] 55130 8246 LAADPSHP True PC9_epitope_Rep2 806.3922672145 806.39116993586 37.076 2 -0.8005191049684247 0.24764781546732956 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 46016 5127 ISGFVFRHEIK True NCI_RA007_Epitope_Rep2 1331.7350054857895 1331.73334490379 24.565 3 -0.8005922913765725 0.24765868886576484 1.0 ['ENSG00000156298|ENST00000378482|TSPAN7', 'ENST00000471410.5_1_X:38422267-38546918:+|nuORF'] 94771 5579 RSLKNKLIMWD True PC9_epitope_Rep6 1402.7754903987798 1402.77385490379 29.505 3 -0.8006602704771747 0.24769130717537394 1.0 ['nc|ENSG00000108852|Q14168-6|MPP2', 'nc|ENSG00000108852|Q14168-2|MPP2', 'nc|ENSG00000108852|Q14168-3|MPP2', 'nc|ENSG00000108852|Q14168|MPP2', 'nc|ENSG00000108852|Q14168-4|MPP2', 'ENSG00000108852|ENST00000269095|MPP2', 'nc|ENSG00000108852|Q14168-5|MPP2'] 25112 15500 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 68.529 2 -0.800665083711187 0.24769130717537394 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68522 9370 LTGEMFAP True PC9_epitope_Rep6 864.4051403973199 864.40404993586 46.234 2 -0.8006972027485099 0.24769130717537394 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG'] 19368 10943 ELLPRPLNSK True H1975_Epitope_Rep3 1165.68190728377 1165.68080993586 47.179 2 -0.8007124875601477 0.2477021793167235 1.0 ['SLITRK3|p.A410S|1|0.15|ENSG00000121871|chr3:165189603-165189603|C/A|missense_variant'] 69619 17762 LVDPLNMHV True PC9_epitope_Rep6 1036.5375515491999 1036.5364499358602 80.955 2 -0.8007433893395397 0.24772750263739757 1.0 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 16437 11317 EELALHRRR True H1975_Epitope_Rep1 1178.66323752786 1178.66214993586 48.508 2 -0.8007490556233043 0.24773479385540254 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33'] 108006 15580 SWRRRWQHRYW True NCI_RA007_Epitope_Rep2 1715.86579392823 1715.86468993586 65.314 2 -0.8007591963387983 0.24773479385540254 1.0 ['ENST00000570069.5_1_16:1826945-1827407:+|nuORF', 'ENST00000561903.6_1_16:1826945-1828699:+|nuORF'] 101277 22585 SLIDVKQSKDP True PC9_epitope_Rep1 1228.66631678928 1228.66520993586 91.68 2 -0.8007985759872109 0.24775295511690412 1.0 ['ENST00000505723.2_1_5:50723860-50724037:-|nuORF'] 55584 18968 LAHLHFEKLE True PC9_epitope_Rep5 1235.6662572196299 1235.6646149037902 77.984 3 -0.8008023063602333 0.24775295511690412 1.0 ['SPEF2|p.D1760Tfs*2|1|0.1|ENSG00000152582|chr5:35807152-35807152|G/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2', 'SPEF2|p.T939Yfs*14|1|0.13|ENSG00000152582|chr5:35709093-35709094|-/C|frameshift_variant', 'SPEF2|p.I293Sfs*23|1|0.1|ENSG00000152582|chr5:35654619-35654619|A/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-3|SPEF2'] 18401 3120 EIVFRYYHKLR True NCI_RA007_Epitope_Rep1 1522.8408675366597 1522.8392249037902 16.024 3 -0.8008044736792901 0.24775295511690412 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 74123 9928 NEALRDRHWK True NCI_RA007_Epitope_Rep1 1323.6796158679902 1323.6785099358601 42.621 2 -0.8008710840033476 0.2477782755082872 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.F1569Sfs*24|1|0.14|ENSG00000197653|chr12:123838611-123838611|C/-|frameshift_variant', 'DNAH10|p.K1629Rfs*13|1|0.48|ENSG00000197653|chr12:123841424-123841424|A/-|frameshift_variant'] 57367 8611 LEAKFHKE True NCI_RA007_Epitope_Rep1 1000.5341804209199 1000.53308993586 37.496 2 -0.8009089397842738 0.2477819842210213 1.0 ['nc|ENSG00000078053|P49418-2|AMPH', 'ENSG00000078053|ENST00000356264|AMPH', 'AMPH|p.A221G|1|0.32|ENSG00000078053|chr7:38466177-38466177|G/C|missense_variant', 'AMPH|p.A287Hfs*48|1|0.32|ENSG00000078053|chr7:38463005-38463005|G/-|frameshift_variant'] 22206 5981 ESWCSPQIK True NCI_RA007_Epitope_Rep3 1076.49608066004 1076.49498993586 30.507 2 -0.8009451893974217 0.2477819842210213 1.0 ['ENST00000538503.5_1_12:121881458-121882696:-|nuORF'] 42688 14656 IEIRSGVSI True PC9_epitope_Rep1 972.56039516876 972.55928993586 61.196 2 -0.8009494642660713 0.2477819842210213 1.0 ['ENSG00000170927|ENST00000371117|PKHD1'] 91576 22967 RIKEIQYEIFR True NCI_RA007_Epitope_Rep1 1493.8354478030499 1493.83381490379 94.325 3 -0.8009866460096594 0.24780730272949267 1.0 ['ENSG00000218336|ENST00000511685|TENM3'] 79712 10537 PDTRVHCCL True PC9_epitope_Rep5 1042.46882036638 1042.46772993586 45.519 2 -0.8010983304610184 0.2478904172927985 1.0 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'nc|ENSG00000100167|Q9UH03-2|SEPTIN3', 'nc|ENSG00000100167|Q9UH03|SEPTIN3', 'ENSG00000100167|ENST00000644076|SEPTIN3'] 95380 5907 RVYQSCRWPGP True NCI_RA007_Epitope_Rep2 1347.6506242388298 1347.64952993586 27.594 2 -0.8011322204962965 0.24792301801736719 1.0 ['ENSG00000160963|ENST00000313669|COL26A1', 'nc|ENSG00000160963|Q96A83-2|COL26A1'] 97766 10253 SEITGAQG True H1975_Epitope_Rep3 761.3555473526101 761.3549949679301 44.486 1 -0.8011328123172436 0.24792301801736719 1.0 ['nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L', 'ENSG00000157060|ENST00000367547|SHCBP1L'] 65235 8657 LQSELASFLM True NCI_RA007_Epitope_Rep2 1137.5739966275698 1137.57288993586 38.321 2 -0.8011609791344029 0.24792301801736719 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3'] 142062 27358 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 114.62 3 -0.8012872270078096 0.24797722938218805 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 126251 6354 VLGYQQTPP True H1975_Epitope_Rep3 1001.5181960036099 1001.51708993586 29.432 2 -0.8013385125998315 0.2479953767246984 1.0 ['SEC24C|p.P49L|1|0.14|ENSG00000176986|chr10:73746978-73746978|C/T|missense_variant'] 115931 10884 TSGLPLESP True PC9_epitope_Rep2 899.46001242115 899.45890993586 47.182 2 -0.8013448474002751 0.2479953767246984 1.0 ['ENST00000157600.7_2_3:8579052-8590296:+|nuORF'] 137274 15363 YCPNDYHQL True H1975_Epitope_Rep2 1151.47059418819 1151.46895490379 64.252 3 -0.8013450269638799 0.2479953767246984 1.0 ['ENSG00000110031|ENST00000395074|LPXN', 'nc|ENSG00000110031|O60711-2|LPXN', 'ENST00000530561.5_1_11:58294929-58321330:-|nuORF'] 79223 5779 PAPLRAAPAA True PC9_epitope_Rep6 933.5396001545298 933.53850993586 30.412 2 -0.8013634876140246 0.24800624133148405 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 117019 8468 TVHSWDGI True PC9_epitope_Rep5 913.4293809992099 913.42828993586 37.515 2 -0.8013690745510261 0.24800993946748726 1.0 ['ENST00000406462.6_1_1:109474009-109474177:+|nuORF'] 44483 19734 ILLFRRPLPK True H1975_Epitope_Rep1 1251.8179472641098 1251.81631490379 82.137 3 -0.8013906513755925 0.24800993946748726 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 142063 27484 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 115.31 3 -0.8014044644986343 0.24800993946748726 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 126737 24559 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 106.24 3 -0.8014221634044727 0.24801722020774042 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 74020 5847 NDETVCDRQE True NCI_RA007_Epitope_Rep2 1207.47753004343 1207.47642993586 27.361 2 -0.8014486269489556 0.24801722020774042 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3'] 57672 13803 LEEFITPIV True PC9_epitope_Rep1 1059.58521293427 1059.5841099358602 57.937 2 -0.8014912486437561 0.2480280835572506 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'ENST00000491510.1_1_3:25668659-25671642:-|nuORF', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant', 'TOP2B|p.A650Cfs*2|1|0.29|ENSG00000077097|chr3:25627255-25627256|-/A|frameshift_variant'] 60865 7446 LHWGWLGWK True PC9_epitope_Rep2 1181.61343380113 1181.61178490379 34.017 3 -0.80150949664122 0.2480353634577603 1.0 ['ENST00000266546.10_1_12:7310842-7311004:+|nuORF'] 81579 19938 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 83.449 3 -0.8015137193580706 0.2480353634577603 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 94465 23938 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 98.595 2 -0.801587377751732 0.24807153381677405 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 67107 8619 LSQKPQVLGPE True NCI_RA007_Epitope_Rep1 1194.66083748602 1194.65920490379 37.526 3 -0.8016262194150859 0.24807153381677405 1.0 ['ENSG00000105497|ENST00000262259|ZNF175'] 108031 18658 SYADAFQFL True NCI_RA007_Epitope_Rep4 1060.4865615221602 1060.48597496793 80.711 1 -0.8016600936208309 0.2480823955970936 1.0 ['ENSG00000242732|ENST00000609883|RTL5'] 119598 10561 VATRPPQQAP True PC9_epitope_Rep3 1063.57744221523 1063.5763499358602 45.57 2 -0.8017324351468925 0.24810770208586122 1.0 ['ENST00000571730.1_1_17:79687201-79687258:+|nuORF'] 49804 4919 KHLKKLLLV True PC9_epitope_Rep4 1090.75903540566 1090.7579299358601 25.517 2 -0.8017644445489714 0.24811139518423828 1.0 ['ENSG00000118322|ENST00000327245|ATP10B'] 87543 10920 QQKQALAL True NCI_RA007_Epitope_Rep4 898.5236157372198 898.52250993586 48.865 2 -0.8017778598930638 0.24811139518423828 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 142065 27919 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 117.67 3 -0.8018054506991363 0.24811139518423828 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 16531 11267 EELNQLKNE True H1975_Epitope_Rep3 1115.5458673034298 1115.5447699358601 48.441 2 -0.8018644517220749 0.2481222556043448 1.0 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 80258 6195 PGAVWQCPV True PC9_epitope_Rep1 955.4585729525098 955.45746993586 28.644 2 -0.8018864714384414 0.248133115710716 1.0 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'nc|ENSG00000186815|Q9ULQ1-2|TPCN1'] 42558 9681 IEETITTVV True PC9_epitope_Rep6 1003.54374204511 1003.54264993586 47.617 2 -0.8019090403846503 0.24815483498230664 1.0 ['nc|ENSG00000154358|Q5VST9-3|OBSCN'] 142066 28047 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 118.36 3 -0.801922688189961 0.24815483498230664 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 21011 5197 EQSEAELE True H1975_Epitope_Rep3 933.3927207069698 933.39162993586 25.08 2 -0.8019388401335599 0.2481656941475533 1.0 ['nc|ENSG00000012822|Q9P1Z2-4|CALCOCO1'] 27238 12835 FLPHFPMTP True NCI_RA007_Epitope_Rep5 1085.53682327321 1085.5357299358602 56.054 2 -0.8019534190272651 0.24817655299911898 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant'] 81578 19848 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 83.097 3 -0.8019812596924251 0.2481946851530907 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 111308 8442 THMTAIVGM-[Oxidation] True PC9_epitope_Rep2 975.4517737003499 975.45066993586 37.841 2 -0.8019900541524985 0.2481946851530907 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 15913 5835 EDLFCYWEKLV True NCI_RA007_Epitope_Rep1 1443.67443894483 1443.6733499358602 26.75 2 -0.8019954708911443 0.2481946851530907 1.0 ['FAM71B|p.H467Tfs*22|1|0.08|ENSG00000170613|chr5:157162866-157162866|G/-|frameshift_variant', 'ENSG00000170613|ENST00000302938|GARIN3'] 110746 13810 TGGGGGGD True NCI_RA007_Epitope_Rep5 576.21396849936 576.2134249679301 59.795 1 -0.80205159325185 0.24824169952197334 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 46332 16060 ISQSVINYVE True PC9_epitope_Rep2 1150.5870038394198 1150.5859099358602 67.03 2 -0.8020719610534167 0.24824169952197334 1.0 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'ENSG00000134313|ENST00000256707|KIDINS220', 'KIDINS220|p.A448Qfs*32|1|0.12|ENSG00000134313|chr2:8791159-8791159|C/-|frameshift_variant', 'KIDINS220|p.K576Nfs*2|1|0.13|ENSG00000134313|chr2:8788706-8788706|T/-|frameshift_variant', 'ENST00000496725.1_1_2:8967049-8967241:-|nuORF', 'nc|ENSG00000134313|Q9ULH0-3|KIDINS220'] 128382 5361 VPRLVRMK True NCI_RA007_Epitope_Rep4 997.62189030985 997.62078993586 27.188 2 -0.8020762488332644 0.24824169952197334 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566292.5_1_16:58035387-58044017:+|nuORF', 'ENST00000565662.5_1_16:58035387-58051252:+|nuORF', 'nc|ENSG00000103005|Q9BQ65-3|USB1'] 29814 11735 FVQLHKLV True NCI_RA007_Epitope_Rep1 982.5963867546599 982.59528993586 49.622 2 -0.8021280958275329 0.2482669978626307 1.0 ['ENSG00000128011|ENST00000248668|LRFN1'] 60456 12085 LGVWCWLL True PC9_epitope_Rep6 988.52044493308 988.51934993586 57.807 2 -0.80217135081934 0.24829956532412956 1.0 ['ENST00000336576.9_2_2:220150866-220150965:+|nuORF'] 59209 8846 LFEEDNLLR True PC9_epitope_Rep1 1147.5873381925899 1147.58569490379 38.868 3 -0.8021998639856535 0.24829956532412956 1.0 ['nc|ENSG00000132561|O00339-3|MATN2', 'nc|ENSG00000132561|O00339-2|MATN2', 'ENSG00000132561|ENST00000254898|MATN2', 'nc|ENSG00000132561|O00339-4|MATN2', 'ENST00000523561.1_1_8:99044328-99047937:+|nuORF'] 5422 20291 ALTPAWVENPY True PC9_epitope_Rep5 1259.61863832087 1259.61700490379 83.099 3 -0.8022857323602842 0.24829956532412956 1.0 ['EPHB4|p.M131V|1|0.45|ENSG00000196411|chr7:100823664-100823664|T/C|missense_variant'] 129807 18687 VRRLPGGG True NCI_RA007_Epitope_Rep2 810.4824196315798 810.48132993586 77.487 2 -0.8022927231011912 0.24831042051756008 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 118101 14610 TYGPDLFPL True PC9_epitope_Rep5 1021.5120479940099 1021.51094993586 61.199 2 -0.8023264175994733 0.24833581216698195 1.0 ['ENST00000495458.5_1_5:176729817-176730289:-|nuORF', 'ENST00000471466.5_1_5:176729278-176730289:-|nuORF'] 129810 17920 VRRLPGGG True NCI_RA007_Epitope_Rep4 810.4824196315798 810.48132993586 77.552 2 -0.8023567904433263 0.24833581216698195 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 78731 6456 PAAARPLPAA True PC9_epitope_Rep2 933.5396001545298 933.53850993586 30.247 2 -0.8023627247178362 0.24833581216698195 1.0 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 131827 8942 VTQQINERK True NCI_RA007_Epitope_Rep4 1114.6094706195 1114.60836993586 41.229 2 -0.8023758333796034 0.24833581216698195 1.0 ['nc|ENSG00000131089|O43307-3|ARHGEF9', 'nc|ENSG00000131089|O43307-2|ARHGEF9', 'nc|ENSG00000131089|O43307|ARHGEF9', 'ENSG00000131089|ENST00000671741|ARHGEF9'] 33539 13104 GLEDTEEP True PC9_epitope_Rep6 888.3712569863999 888.37014993586 62.019 2 -0.8023857556392345 0.24833581216698195 1.0 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 35376 11060 GSDAGQCPEGY True H1975_Epitope_Rep2 1082.3974888175799 1082.39638993586 47.573 2 -0.8024242359483915 0.24834307992202728 1.0 ['nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant'] 56992 7674 LDREVQYLLNK True NCI_RA007_Epitope_Rep1 1389.7616141564497 1389.75997490379 33.842 3 -0.8024401302815993 0.24834307992202728 1.0 ['ENSG00000149428|ENST00000617285|HYOU1'] 129545 14981 VRLIHLRLK True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 62.776 3 -0.8024601001804115 0.24835393323322166 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 113851 8508 TNHRRRFP True H1975_Epitope_Rep3 1082.58459328434 1082.5834899358601 37.711 2 -0.8025561280471559 0.24839017065634836 1.0 ['nc|ENSG00000188687|Q9BY07-7|SLC4A5', 'nc|ENSG00000188687|Q9BY07-4|SLC4A5', 'nc|ENSG00000188687|Q9BY07-8|SLC4A5', 'ENST00000451608.2_1_2:74452054-74542150:-|nuORF', 'ENSG00000188687|ENST00000394019|SLC4A5', 'nc|ENSG00000188687|Q9BY07|SLC4A5', 'nc|ENSG00000188687|Q9BY07-2|SLC4A5', 'nc|ENSG00000188687|Q9BY07-6|SLC4A5', 'nc|ENSG00000188687|Q9BY07-5|SLC4A5'] 130307 10936 VSHSVAKLI True PC9_epitope_Rep1 952.5705659296399 952.56946993586 46.953 2 -0.8025684450364612 0.24839017065634836 1.0 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2', 'ENST00000584680.1_1_18:26231883-26232303:+|nuORF'] 58504 6446 LEQEKKELQ True NCI_RA007_Epitope_Rep4 1143.6135529404298 1143.61189490379 31.394 3 -0.802568694034613 0.24839017065634836 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3', 'nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3'] 117901 2292 TWMRRHRLV True H1975_Epitope_Rep1 1253.69276383433 1253.69110490379 11.851 3 -0.8025758573729069 0.24839017065634836 1.0 ['nc|ENSG00000197275|Q9Y620-2|RAD54B'] 85191 7518 QEPPLRLQ True NCI_RA007_Epitope_Rep1 979.5450794577898 979.5439899358599 33.237 2 -0.802576140896621 0.24839017065634836 1.0 ['ENST00000376499.7_2_9:84303366-84303945:-|nuORF'] 7874 7371 ATAELIMSR True NCI_RA007_Epitope_Rep3 990.51681610462 990.51570993586 36.121 2 -0.8025865698028354 0.24839017065634836 1.0 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 119766 4388 VAYPVWPYAQP True NCI_RA007_Epitope_Rep5 1289.6444591458899 1289.64280490379 23.504 3 -0.8026067378034455 0.24840102219078006 1.0 ['ENST00000560542.1_1_14:24633743-24634393:+|nuORF'] 19682 20809 ELRIQLRRTHQ True H1975_Epitope_Rep3 1448.8324281112798 1448.8307849037901 86.931 3 -0.8026329818832815 0.2484118734118734 1.0 ['ENSG00000088320|ENST00000201979|REM1'] 30677 7536 GALAQHALLS True NCI_RA007_Epitope_Rep2 979.5450794577899 979.5439899358599 33.939 2 -0.8026915082095885 0.24842272431964196 1.0 ['ENST00000498209.6_1_11:2937879-2942743:+|nuORF'] 69621 5323 LVDPQASPP True NCI_RA007_Epitope_Rep2 922.47599683846 922.47488993586 25.327 2 -0.80273576978782 0.2484299883061198 1.0 ['ENST00000376150.3_1_X:49460477-49460564:-|nuORF'] 16190 7621 EEEDTPVSPK True PC9_epitope_Rep2 1129.5138984688099 1129.51225490379 34.686 3 -0.8027594209039524 0.2484299883061198 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 36337 13074 GVEQLHEDP True PC9_epitope_Rep4 1022.46688870674 1022.46578993586 58.181 2 -0.8027889962375607 0.24843384624267445 1.0 ['ENST00000560170.1_1_15:96828545-96870526:-|nuORF', 'ENST00000502125.6_1_15:96826128-96870526:-|nuORF', 'ENST00000561344.5_1_15:96826128-96833920:-|nuORF'] 91358 8547 RHAVPVAL True PC9_epitope_Rep1 861.5184707871299 861.51736993586 37.713 2 -0.8028053616261389 0.24843384624267445 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF', 'ENST00000487121.1_1_2:47136034-47168791:-|nuORF'] 44927 16703 INVAVVLGEV True PC9_epitope_Rep1 1011.5964463243099 1011.59534993586 69.076 2 -0.8028863175797996 0.24843384624267445 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P', 'ENSG00000198445|ENST00000359963|CCT8L2', 'CCT8L2|p.A307Rfs*8|1|0.33|ENSG00000198445|chr22:16591632-16591632|C/-|frameshift_variant'] 75555 13142 NLAENISRV True PC9_epitope_Rep3 1014.54580773378 1014.5447099358599 55.58 2 -0.8028948939902167 0.24843384624267445 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 10831 13024 CTDGDADSWVP True PC9_epitope_Rep2 1164.43935362956 1164.43824993586 55.378 2 -0.8029023684483896 0.24843384624267445 1.0 ['ENST00000601438.2_1_19:47724796-47724889:-|nuORF'] 12782 5521 DLERIFGLP True H1975_Epitope_Rep3 1058.5760452328998 1058.57494993586 26.284 2 -0.8029176180143999 0.24843384624267445 1.0 ['ENSG00000119943|ENST00000370575|PYROXD2'] 94794 18404 RSPRGILG True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50752993586 79.642 2 -0.8029239869059156 0.24843384624267445 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 78834 5635 PAEAERLGP True H1975_Epitope_Rep2 938.4821448480598 938.48104993586 26.674 2 -0.8029661343588463 0.24843384624267445 1.0 ['ENSG00000105379|ENST00000309244|ETFB', 'nc|ENSG00000105379|P38117-2|ETFB'] 99608 15998 SIFETNCHS True PC9_epitope_Rep5 1036.4283950230401 1036.42728993586 66.526 2 -0.8029712517054715 0.24843384624267445 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B', 'ENST00000474583.5_1_2:24032019-24046413:-|nuORF'] 83829 20873 PVLQEDHCDS True PC9_epitope_Rep3 1141.47098811101 1141.46988993586 85.56 2 -0.8029821404726951 0.24843384624267445 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 45724 13602 IRRGFIML True NCI_RA007_Epitope_Rep4 1004.59534120884 1004.59424993586 59.532 2 -0.8029844449919392 0.24843384624267445 1.0 ['ENSG00000205810|ENST00000396439|KLRC3'] 29446 2731 FVEEWRKFVRK True NCI_RA007_Epitope_Rep2 1522.8408675366597 1522.83865987172 14.85 4 -0.8030009497567169 0.24844469464051155 1.0 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48'] 71020 22807 LYISLVTWQRP True PC9_epitope_Rep1 1374.7659712609 1374.7648699358601 92.539 2 -0.803043937518183 0.2484555427251732 1.0 ['ENSG00000130202|ENST00000252483|NECTIN2', 'nc|ENSG00000130202|Q92692-2|NECTIN2'] 55651 5937 LAKTNELDFR True H1975_Epitope_Rep3 1205.6404363946099 1205.63878490379 27.845 3 -0.803057954178319 0.24846639049667296 1.0 ['CPA3|p.W52R|1|0.29|ENSG00000163751|chr3:148868924-148868924|T/C|missense_variant'] 98013 10537 SEQESVSVGC True H1975_Epitope_Rep3 1023.4178899089899 1023.41737496793 45.597 1 -0.8031027271668438 0.24847723795502438 1.0 ['nc|ENSG00000285231|A0A2R8YFM6|OOSP3'] 125362 11208 VIQVSGKYKWY True H1975_Epitope_Rep1 1369.7394221598897 1369.73832993586 48.082 2 -0.8031291069070373 0.24849893193233646 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 4844 13154 ALEKYYLSIF True NCI_RA007_Epitope_Rep1 1245.6645258841297 1245.6634299358602 55.162 2 -0.8031548941321341 0.24849893193233646 1.0 ['ENSG00000198829|ENST00000362032|SUCNR1'] 43515 16216 IGMTRIPVI True PC9_epitope_Rep2 998.5946725024999 998.59356993586 67.622 2 -0.8032018641622533 0.24849901858907747 1.0 ['NTRK3|p.E512K|1|0.18|ENSG00000140538|chr15:88032908-88032908|C/T|missense_variant', 'nc|ENSG00000140538|Q16288-2|NTRK3', 'nc|ENSG00000140538|Q16288-5|NTRK3', 'nc|ENSG00000140538|Q16288-3|NTRK3', 'nc|ENSG00000140538|Q16288-4|NTRK3', 'ENSG00000140538|ENST00000629765|NTRK3'] 11143 443 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 2.4319 2 -0.8032117134772853 0.24849901858907747 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 67687 8638 LSWGFLINP True NCI_RA007_Epitope_Rep1 1045.55966689277 1045.55856993586 37.602 2 -0.8032197990587037 0.24849901858907747 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0|ABI3BP', 'ENST00000475896.5_1_3:100583650-100712249:-|nuORF'] 91940 25023 RKMRMRWKRRR True PC9_epitope_Rep2 1658.9674396291396 1658.96634993586 101.92 2 -0.8032202155940995 0.24849901858907747 1.0 ['GPIHBP1|p.A3Rfs*77|1|0.18|ENSG00000277494|chr8:143213273-143213273|G/-|frameshift_variant'] 58313 8982 LEMEFEDME True H1975_Epitope_Rep2 1171.44132777551 1171.44022993586 39.503 2 -0.8032365460068384 0.2485098644806535 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 75363 6531 NISNHQLTQGR True H1975_Epitope_Rep1 1266.6428960060998 1266.64178993586 30.179 2 -0.803342903445036 0.24852805356730548 1.0 ['CAPN6|p.R283Gfs*11|1|0.19|ENSG00000077274|chrX:111251586-111251596|AGGGGTTTCTC/-|frameshift_variant', 'ENSG00000077274|ENST00000324068|CAPN6'] 110152 9169 TENVKTVTV True PC9_epitope_Rep4 989.5393253710099 989.53822993586 42.862 2 -0.8033469128658007 0.24852805356730548 1.0 ['MYH6|p.G66V|1|0.05|ENSG00000197616|chr14:23407027-23407027|C/A|missense_variant'] 64394 19637 LPLRCFWKVR True NCI_RA007_Epitope_Rep4 1316.7539671085601 1316.7533749679299 84.853 1 -0.8033685002458328 0.24852805356730548 1.0 ['ENST00000526688.1_1_8:38269909-38271480:-|nuORF'] 138097 7714 YGGLRGAI True PC9_epitope_Rep3 805.4446371405298 805.44354993586 34.668 2 -0.8033860154692342 0.24852805356730548 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 22009 7924 ESHSRELAL True PC9_epitope_Rep1 1040.5250722892 1040.5239699358601 35.304 2 -0.8034156225523782 0.24852805356730548 1.0 ['nc|ENSG00000070159|P26045-3|PTPN3', 'nc|ENSG00000070159|P26045-2|PTPN3', 'ENSG00000070159|ENST00000374541|PTPN3'] 72728 18535 MNHPWIMQS True H1975_Epitope_Rep2 1142.50012049466 1142.4984749037899 76.918 3 -0.8034342332517013 0.24852805356730548 1.0 ['nc|ENSG00000162889|P49137-2|MAPKAPK2', 'ENSG00000162889|ENST00000367103|MAPKAPK2'] 70115 10512 LVPELQAT True PC9_epitope_Rep5 869.4858332461699 869.48472993586 45.422 2 -0.8034987440402683 0.24852805356730548 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 127055 11241 VLSREGGL True PC9_epitope_Rep2 829.4657665079299 829.46466993586 48.565 2 -0.8036322175221168 0.24858944573514768 1.0 ['ENST00000261205.8_1_12:79258472-79371593:+|nuORF'] 108963 10987 TAELRLNNNEI True NCI_RA007_Epitope_Rep2 1285.6626283911698 1285.66152993586 47.345 2 -0.8036411842258816 0.24858944573514768 1.0 ['ENSG00000187122|ENST00000266058|SLIT1', 'SLIT1|p.K757Rfs*35|1|0.3|ENSG00000187122|chr10:97040017-97040017|G/-|frameshift_variant', 'nc|ENSG00000187122|O75093-2|SLIT1'] 66388 7097 LSGHTDGTIV True PC9_epitope_Rep4 998.5032742154599 998.50216993586 34.565 2 -0.8036448842192196 0.24858944573514768 1.0 ['IFT172|p.A172T|1|0.13|ENSG00000138002|chr2:27483345-27483345|C/T|missense_variant'] 116077 7481 TSQPSTSVP True H1975_Epitope_Rep2 902.4345259493 902.43342993586 33.723 2 -0.8036875616732299 0.2485967013463009 1.0 ['nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'ENST00000488149.5_1_3:182948954-183027611:-|nuORF', 'nc|ENSG00000053524|Q86YR7-3|MCF2L2'] 70600 25825 LWHIWRERN True H1975_Epitope_Rep2 1308.68397297244 1308.68233490379 106.05 3 -0.8037001466226211 0.2485967013463009 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 12101 4491 DIAELEEPED True H1975_Epitope_Rep2 1158.49282867106 1158.4917299358601 22.387 2 -0.803728296680769 0.24860395653867798 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant'] 56337 7799 LDDAVNPLHEN True H1975_Epitope_Rep3 1235.57823006087 1235.57712993586 34.982 2 -0.8037392017175018 0.24860395653867798 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 91100 8778 RFQNSLKEL True PC9_epitope_Rep4 1133.61930702721 1133.61766490379 41.277 3 -0.8038060290581659 0.24865808611335566 1.0 ['ENSG00000096696|ENST00000379802|DSP'] 68851 9608 LTMFCTTNSL True PC9_epitope_Rep3 1129.5147674992902 1129.51312490379 41.908 3 -0.8038267743671706 0.2486689272058293 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 129820 23327 VRRLPGGG True PC9_epitope_Rep4 810.4824196315798 810.48132993586 97.987 2 -0.8038722377994074 0.24868702025740175 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 38750 11635 HGNPFSLP True PC9_epitope_Rep6 867.42390169595 867.42280993586 55.875 2 -0.8039054832072192 0.24868702025740175 1.0 ['ENST00000482866.5_1_7:76940677-76940857:-|nuORF'] 87490 14865 QQELTALYQ True H1975_Epitope_Rep1 1092.54513902744 1092.54457496793 62.412 1 -0.8039087111333124 0.24868702025740175 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000482952.5_1_2:233671364-233680450:+|nuORF'] 11688 16068 DGVFNISV True PC9_epitope_Rep5 849.4232329896099 849.42212993586 66.794 2 -0.8039312261510452 0.2487087000432838 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 56990 10292 LDRERVAV True PC9_epitope_Rep1 956.5403284305198 956.53922993586 44.473 2 -0.8039426200738129 0.2487087000432838 1.0 ['ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant'] 137755 20355 YENLKWTLERK True PC9_epitope_Rep1 1478.7881632574597 1478.78706993586 83.126 2 -0.8039747808032843 0.2487339671913549 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57', 'CCDC57|p.E177Sfs*20|1|0.5|ENSG00000176155|chr17:82195352-82195352|C/-|frameshift_variant'] 131820 9469 VTQLQEFL True NCI_RA007_Epitope_Rep4 976.5229470308799 976.52184993586 43.28 2 -0.8041206594683601 0.24878808864265928 1.0 ['nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENSG00000086200|ENST00000325324|IPO11'] 123094 8308 VGKHCRLLYP True PC9_epitope_Rep1 1184.64883333368 1184.64772993586 36.79 2 -0.8041738642513044 0.24882778122430135 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 72469 15817 MKYFWKPRFRI True H1975_Epitope_Rep1 1570.8594948062598 1570.85838993586 66.148 2 -0.8042067889603036 0.24886747266064577 1.0 ['ENST00000505553.5_1_5:64948364-64954234:+|nuORF'] 125980 11763 VLDPLLCDFL True H1975_Epitope_Rep2 1146.59948309942 1146.59838993586 50.322 2 -0.8042459109104773 0.24889273606001586 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF', 'TBC1D17|p.R471S|1|0.35|ENSG00000104946|chr19:49884727-49884727|G/T|missense_variant'] 123870 16205 VGRRAAKA True NCI_RA007_Epitope_Rep5 827.5089687325898 827.5084249679301 69.076 1 -0.8042687707318431 0.24889639054790963 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 51019 1400 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 7.2889 3 -0.8042969388204873 0.24889639054790963 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 122850 4793 VGGWKHYSRWT True H1975_Epitope_Rep3 1375.6785532388299 1375.67689490379 23.564 3 -0.8043304351552577 0.24889639054790963 1.0 ['ENST00000003912.7_2_1:24795783-24795897:+|nuORF'] 69938 7951 LVKNDARRTRS True H1975_Epitope_Rep3 1314.7480297809798 1314.7469299358602 35.553 2 -0.8043889804442425 0.2489216520723034 1.0 ['ENSG00000164619|ENST00000649409|BMPER'] 132639 6477 VVFSEDEMKKF True H1975_Epitope_Rep1 1357.6587888806896 1357.6576899358602 29.975 2 -0.8044135618174902 0.24894332164856248 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 100990 6262 SLFSEWQSK True NCI_RA007_Epitope_Rep2 1110.53457434374 1110.53346993586 28.962 2 -0.8044149159463652 0.24894332164856248 1.0 ['ENST00000330287.10_1_X:154065779-154088866:-|nuORF'] 120856 8662 VELTQQLLRQP True H1975_Epitope_Rep1 1323.7510494727499 1323.74994993586 38.248 2 -0.8044437442717172 0.24895415596780243 1.0 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP'] 33053 16650 GILKATTP True PC9_epitope_Rep1 799.48035394291 799.47980496793 68.874 1 -0.8044716409445212 0.2489578074287775 1.0 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 59078 12795 LEWLGCRAPSP True H1975_Epitope_Rep1 1227.6070280913498 1227.60592993586 54.279 2 -0.8044732672474637 0.2489578074287775 1.0 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|76|2|anti-sense'] 18338 9342 EISSYFQHH True PC9_epitope_Rep5 1146.50942222506 1146.50776490379 40.887 3 -0.8044866155910265 0.2489578074287775 1.0 ['ENST00000527597.1_1_11:9492659-9494227:+|nuORF'] 120929 4781 VENWQGNPIQK True H1975_Epitope_Rep3 1311.6571490879098 1311.6555149037902 23.516 3 -0.8045831340860133 0.24901197172941006 1.0 ['ENSG00000129933|ENST00000262815|MAU2'] 108723 5518 SYRIYWYQQKP True NCI_RA007_Epitope_Rep1 1530.7619485096197 1530.75973987172 25.535 4 -0.8045871407046726 0.24901197172941006 1.0 ['nc|ENSG00000211647|A0A075B6I7|IGLV5-48'] 69435 12132 LTYLALSSTV True PC9_epitope_Rep3 1066.5910265907 1066.58992993586 51.707 2 -0.8045909242413182 0.24901197172941006 1.0 ['ENST00000375856.4_1_13:110406277-110406442:-|nuORF'] 131501 4306 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 21.673 2 -0.8045935635339706 0.24901197172941006 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 27331 10068 FLSGCPWPGFC True NCI_RA007_Epitope_Rep3 1212.5096225491998 1212.50797490379 46.697 3 -0.8046176695666444 0.24901197172941006 1.0 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000599961.1_1_19:58234694-58238980:-|nuORF'] 110416 2852 TEWLRFYNKWL True H1975_Epitope_Rep1 1554.7983340183396 1554.79669490379 14.586 3 -0.8046721949736356 0.24908049790137168 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000464865.5_1_7:140051761-140082350:-|nuORF', 'ENST00000473707.5_1_7:140051761-140069464:-|nuORF'] 83652 7355 PVECPSAA True PC9_epitope_Rep5 772.3425401407599 772.3414499358599 33.249 2 -0.8047127613534325 0.24910575203369295 1.0 ['ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 55146 9627 LAAGARKC True PC9_epitope_Rep1 788.4326925578399 788.43158993586 41.885 2 -0.8047567877771645 0.24913100543752614 1.0 ['ENSG00000132837|ENST00000255189|DMGDH'] 30269 7896 GAAAAPNP True H1975_Epitope_Rep1 667.32893868195 667.3283949679301 35.325 1 -0.8048761969469603 0.24918151005985434 1.0 ['ENSG00000133069|ENST00000358024|TMCC2'] 5689 18068 APAIQKAEI True PC9_epitope_Rep1 939.5389314481899 939.53782993586 74.291 2 -0.8048999439347418 0.24918151005985434 1.0 ['ENSG00000277399|ENST00000616987|GPR179', 'nc|ENSG00000277399|Q6PRD1|GPR179'] 30451 19921 GAFIAGVP True PC9_epitope_Rep1 730.4013753462199 730.40082496793 81.444 1 -0.8049227142555613 0.2491923387562017 1.0 ['ENSG00000176454|ENST00000314891|LPCAT4', 'LPCAT4|p.P217A|1|0.15|ENSG00000176454|chr15:34364016-34364016|G/C|missense_variant'] 30969 11004 GARYYINP True PC9_epitope_Rep3 952.4766655447999 952.47556993586 47.316 2 -0.8050219035238252 0.24922482297119947 1.0 ['ENST00000535357.5_1_12:19283009-19360212:+|nuORF'] 82186 19442 PNSWSQAVLP True PC9_epitope_Rep2 1097.5505587610498 1097.54946993586 80.163 2 -0.8050432414191188 0.24922482297119947 1.0 ['ENST00000470959.1_1_3:47868940-47872365:+|nuORF'] 31974 4044 GEQCQVWSPRP True H1975_Epitope_Rep3 1285.58735527593 1285.58569490379 20.685 3 -0.8050727812014368 0.24922482297119947 1.0 ['SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 128193 9014 VPLYSTIEVY True PC9_epitope_Rep1 1182.61724133854 1182.61558490379 39.52 3 -0.8050835104231395 0.249235650418229 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant', 'FAT3|p.H1979Tfs*13|1|0.35|ENSG00000165323|chr11:92799397-92799397|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7-2|FAT3'] 67453 14267 LSSRLRLDPV True H1975_Epitope_Rep1 1154.6771562565 1154.6760499358602 60.063 2 -0.8051299257060389 0.249300568198206 1.0 ['ENSG00000158008|ENST00000374280|EXTL1'] 136534 20882 WWDIYYTLFEK True PC9_epitope_Rep3 1562.7445671099797 1562.74346993586 85.597 2 -0.8051429125635962 0.249300568198206 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 139368 25342 YLLVKITRLG True PC9_epitope_Rep3 1174.74377926434 1174.7426899358602 102.9 2 -0.8051766732510824 0.24932581515077226 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 68594 8563 LTHLCLAK True H1975_Epitope_Rep3 897.51060852537 897.50950993586 37.926 2 -0.8052855967045526 0.2493943239501615 1.0 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'NLRP2|p.N878K|1|0.51|ENSG00000022556|chr19:54990598-54990598|C/G|missense_variant', 'ENST00000540597.5_1_19:55501708-55512263:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 131868 7714 VTREWYQQT True PC9_epitope_Rep3 1209.5778361380499 1209.57619490379 34.668 3 -0.8053047067364014 0.24940514817218257 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 127070 13503 VLSTPWESL True PC9_epitope_Rep5 1030.5335117145798 1030.5324099358602 56.959 2 -0.8053305819072575 0.24940898345153664 1.0 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 2448 9991 AEQKKWEEQHE True NCI_RA007_Epitope_Rep1 1440.66335666716 1440.66224993586 42.868 2 -0.8053415100665041 0.24940898345153664 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 107439 14708 SVLSCVRSL True PC9_epitope_Rep1 962.52190148506 962.52080993586 61.394 2 -0.8053570053177654 0.24940898345153664 1.0 ['ENSG00000197993|ENST00000355265|KEL'] 140449 26517 YRHRRKYF True H1975_Epitope_Rep2 1224.6628436050398 1224.6617499358601 109.17 2 -0.8053743200710523 0.24940898345153664 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 9058 16740 AVIAKENYPL True PC9_epitope_Rep1 1116.6179100448799 1116.6168099358601 69.219 2 -0.8053945325222778 0.24940898345153664 1.0 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000564547.1_1_16:88923507-88925305:+|nuORF'] 36338 11397 GVEQLPVV True H1975_Epitope_Rep2 839.4752685624699 839.47416993586 48.888 2 -0.8054227162176587 0.24940898345153664 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 129823 21113 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 94.048 2 -0.805427206675512 0.24940898345153664 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 121401 17037 VEVSLGLPAL True PC9_epitope_Rep4 996.5855472874398 996.58444993586 73.524 2 -0.8054305497254575 0.24940898345153664 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 40255 10860 HQKNLPYTL True NCI_RA007_Epitope_Rep5 1112.59784330664 1112.59674993586 48.409 2 -0.8054356823910733 0.24940898345153664 1.0 ['ENST00000203630.9_2_12:6857197-6857296:-|nuORF'] 129182 3371 VQSIYHFYQK True NCI_RA007_Epitope_Rep1 1311.6611718391898 1311.65953490379 17.003 3 -0.8054476779651255 0.24940898345153664 1.0 ['ENST00000328965.8_2_11:120100260-120100626:+|nuORF'] 93937 18084 RRGRREEEGRP True NCI_RA007_Epitope_Rep5 1396.7395903555998 1396.7384899358601 76.359 2 -0.8054547095130413 0.24940898345153664 1.0 ['ENST00000381340.7_1_12:26985709-26985778:-|nuORF'] 16279 8307 EEFGYNADTQK True NCI_RA007_Epitope_Rep1 1300.5571602631196 1300.55606993586 36.313 2 -0.8054843548974102 0.24940898345153664 1.0 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 77838 1895 NVDWIYVVPW True NCI_RA007_Epitope_Rep5 1289.6444591458899 1289.64280490379 10.767 3 -0.8054904303858138 0.24940898345153664 1.0 ['nc|ENSG00000249948|Q9H227|GBA3'] 25862 6987 FFGSGFTAA True PC9_epitope_Rep5 903.41266830591 903.41156993586 31.843 2 -0.8055122848422671 0.24940898345153664 1.0 ['ENST00000547877.5_1_12:51442361-51442637:+|nuORF'] 136528 15017 WWDIYYTLFEK True H1975_Epitope_Rep3 1562.7445671099797 1562.74346993586 63.154 2 -0.8055511134757463 0.24940898345153664 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 19616 14887 ELQQVEGLK True H1975_Epitope_Rep1 1042.5658744720197 1042.56537496793 62.498 1 -0.8055890773142872 0.24940898345153664 1.0 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1', 'ENST00000502531.1_1_5:179023563-179032937:+|nuORF'] 71654 12511 MEAISWQAS True H1975_Epitope_Rep2 1021.45388149489 1021.45278993586 53.216 2 -0.8056064898101336 0.24940898345153664 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 56566 7409 LDGRWWPLLTR True NCI_RA007_Epitope_Rep5 1411.7724536236697 1411.7707949037901 35.176 3 -0.805607191396648 0.24940898345153664 1.0 ['ENST00000532219.5_3_5:139921832-139928844:+|nuORF'] 130203 14387 VSEQRILL True PC9_epitope_Rep2 956.5654805491998 956.56438993586 60.601 2 -0.8056199520490097 0.24940898345153664 1.0 ['ENST00000561139.1_1_15:45009953-45010131:+|nuORF'] 141640 6737 YTSETYLMKHM True NCI_RA007_Epitope_Rep1 1402.6261088534202 1402.6250099358601 30.215 2 -0.8056343256912618 0.24940898345153664 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 19017 7377 ELETRQKQYRW True NCI_RA007_Epitope_Rep1 1535.7844748593498 1535.78281490379 32.689 3 -0.8056481735527231 0.24940898345153664 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 51020 1513 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 7.8649 3 -0.8056487489649153 0.24940898345153664 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 103781 8227 SPVVPAPR True PC9_epitope_Rep5 821.47593726881 821.47484993586 36.584 2 -0.805653831834766 0.24940898345153664 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 133409 8339 VVVQQQTRPVP True H1975_Epitope_Rep3 1249.71427004121 1249.7131699358602 37.06 2 -0.8056667255928208 0.24940898345153664 1.0 ['ENSG00000152672|ENST00000272367|CLEC4F', 'nc|ENSG00000152672|Q8N1N0-2|CLEC4F'] 7298 4138 ARGRDPYP True H1975_Epitope_Rep1 930.46716349026 930.46606993586 20.844 2 -0.8056773488130397 0.24940898345153664 1.0 ['CNTN2|p.G434Rfs*49|1|0.25|ENSG00000184144|chr1:205064378-205064379|GG/-|frameshift_variant'] 136088 18868 WRLCKTSL True PC9_epitope_Rep3 1005.54297128281 1005.54186993586 77.799 2 -0.8056874773583086 0.24940898345153664 1.0 ['nc|ENSG00000089123|Q9H6P5-3|TASP1', 'ENST00000480436.5_1_20:13415759-13610725:-|nuORF'] 140778 9773 YSDHHRLMSC True H1975_Epitope_Rep3 1247.51756146395 1247.5164699358602 42.615 2 -0.8056887413553032 0.24940898345153664 1.0 ['ENST00000431717.6_2_3:111812256-111821694:+|nuORF'] 102529 16069 SLVQRVETI True PC9_epitope_Rep3 1043.59750895347 1043.59640993586 66.959 2 -0.8057391270173956 0.24942706006140186 1.0 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 112605 17908 TLERWYVAP True PC9_epitope_Rep5 1133.58694426977 1133.58584993586 73.9 2 -0.8057757544825238 0.24942706006140186 1.0 ['ENSG00000136881|ENST00000259407|BAAT'] 3212 15935 AGELTEDEMER True PC9_epitope_Rep5 1278.5397959468198 1278.53868993586 66.285 2 -0.8057854308790006 0.24942706006140186 1.0 ['ENST00000445477.1_1_22:31955550-31955922:+|nuORF'] 11142 192 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 1.0602 2 -0.805831914729777 0.24942706006140186 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 97874 7300 SELQPKAK True NCI_RA007_Epitope_Rep2 899.5076313199099 899.50652993586 33.015 2 -0.8058381694700566 0.24942706006140186 1.0 ['ENST00000551688.1_1_12:101790345-101801520:-|nuORF', 'ENST00000539055.5_1_12:101796714-101801520:-|nuORF', 'ENST00000551092.5_1_12:101799623-101801520:-|nuORF', 'ENST00000261636.12_1_12:101796714-101801562:-|nuORF'] 84137 12517 PYDEGLRRGF True H1975_Epitope_Rep2 1208.59382055536 1208.59272993586 53.24 2 -0.8058452391167152 0.24942706006140186 1.0 ['GAA|p.V466Ffs*11|1|0.16|ENSG00000171298|chr17:80110009-80110009|G/-|frameshift_variant'] 20986 7221 EQQVKELEK True NCI_RA007_Epitope_Rep1 1129.5979028762897 1129.5968099358602 32.077 2 -0.8058545356632094 0.24942706006140186 1.0 ['ENSG00000197978|ENST00000618348|GOLGA6L9', 'nc|ENSG00000197978|A6NEM1-2|GOLGA6L9', 'ENSG00000278662|ENST00000610657|GOLGA6L10'] 38159 4416 HDGWPMICLEK True H1975_Epitope_Rep3 1327.6053138391896 1327.6042099358601 22.108 2 -0.8059316317257403 0.24943787835110984 1.0 ['ENST00000450600.1_1_7:56296937-56297204:-|nuORF', 'nc|ENSG00000107443|Q5T5M9-2|CCNJ', 'nc|ENSG00000107443|Q5T5M9|CCNJ', 'ENSG00000107443|ENST00000465148|CCNJ'] 110681 5659 TGAVVGGY True NCI_RA007_Epitope_Rep4 722.3599044570599 722.35935496793 28.373 1 -0.8060333824253536 0.2494631094968363 1.0 ['ENST00000327761.7_1_3:50374719-50374857:-|nuORF'] 25150 15872 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 67.772 2 -0.806105940746764 0.24947755278518413 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 86734 18371 QLLCSMRWRTW True PC9_epitope_Rep1 1478.7274946605398 1478.7263899358602 75.456 2 -0.8061122032102813 0.24947755278518413 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 57122 12979 LDTEAGRCVP True PC9_epitope_Rep1 1059.5018943164698 1059.5007899358602 54.796 2 -0.8061518379222871 0.24947755278518413 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 77716 11274 NTLERREKHEK True NCI_RA007_Epitope_Rep2 1438.7640737679396 1438.7629699358602 48.44 2 -0.806179017469395 0.24947755278518413 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 10195 15582 AYYQALSAER True PC9_epitope_Rep4 1170.5669371011797 1170.5658499358601 67.857 2 -0.8062289839569367 0.2494883694116969 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'ENST00000489156.1_1_6:152599163-152623219:-|nuORF'] 131503 4495 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 22.384 2 -0.806262204180999 0.24950640591448212 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 20338 11467 ENVRLAEETEK True NCI_RA007_Epitope_Rep1 1316.6572086575595 1316.65610993586 48.57 2 -0.8062901675249134 0.24950640591448212 1.0 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-2|KIF15', 'nc|ENSG00000163808|Q9NS87-3|KIF15'] 135337 22622 WGKMPRRG True PC9_epitope_Rep1 986.5232388977398 986.5221499358599 91.825 2 -0.8062926198556102 0.24950640591448212 1.0 ['ENST00000427025.6_2_6:138893369-138893522:-|nuORF'] 131689 18898 VTNEPPKGL True PC9_epitope_Rep3 953.5181960036099 953.51708993586 77.914 2 -0.8063502013934618 0.2495136256863282 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-2|DNAH6'] 13265 16285 DLSYSMKDDLW True H1975_Epitope_Rep3 1371.6016679273898 1371.6005699358602 68.11 2 -0.8064011892832775 0.2495136256863282 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 11141 131 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 0.72018 2 -0.8064814159544414 0.2495532626239336 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 86233 7985 QILFYYWNFIP True PC9_epitope_Rep5 1502.7598232512996 1502.75818490379 35.653 3 -0.8065471341661093 0.24957848774372055 1.0 ['ENST00000503862.5_3_4:108746377-108829880:+|nuORF'] 83604 11033 PVCSKAQWRL True PC9_epitope_Rep5 1186.6280978890998 1186.62646490379 47.428 3 -0.8066574387847263 0.2496469435397873 1.0 ['ENST00000503862.5_3_4:108746377-108829880:+|nuORF'] 131373 20781 VTGYKVLYRPD True PC9_epitope_Rep3 1309.7030366511697 1309.70192993586 85.206 2 -0.8067330197120474 0.2496541587411378 1.0 ['ENSG00000018236|ENST00000551295|CNTN1', 'nc|ENSG00000018236|Q12860-2|CNTN1'] 106027 13716 SSWWTRNWWWF True H1975_Epitope_Rep3 1640.7313170876798 1640.7296849037903 58.055 3 -0.8067371791701585 0.2496541587411378 1.0 ['ENST00000573520.5_1_16:4521405-4524561:-|nuORF', 'ENST00000571291.5_1_16:4519639-4524561:-|nuORF', 'ENST00000283429.10_1_16:4519403-4524606:-|nuORF', 'ENST00000404295.7_1_16:4519400-4524561:-|nuORF', 'ENST00000574733.5_1_16:4519403-4524387:-|nuORF'] 36124 19836 GVALFWIIF True PC9_epitope_Rep3 1064.6058888092 1064.60478993586 81.534 2 -0.8067935665746252 0.24965777604864622 1.0 ['ENSG00000235169|ENST00000642557|SMIM1'] 42789 12395 IENLAREELQK True NCI_RA007_Epitope_Rep1 1341.7252286477299 1341.7241299358602 52.19 2 -0.8068100493033624 0.24965777604864622 1.0 ['ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 14238 19955 DSISTKLW True NCI_RA007_Epitope_Rep4 948.4916469026 948.49054993586 86.293 2 -0.806829493714099 0.24965777604864622 1.0 ['ENST00000487694.7_2_3:77629113-77629164:+|nuORF'] 93732 523 RRAGEAHRRHR True PC9_epitope_Rep3 1400.7722278965598 1400.77112993586 2.9015 2 -0.8068668376716431 0.24966139304342813 1.0 ['ENST00000450917.1_1_2:3523256-3523661:+|nuORF'] 113668 6583 TLWPKWMT True NCI_RA007_Epitope_Rep1 1061.5368232732098 1061.5357299358602 29.619 2 -0.8068746905912183 0.24966139304342813 1.0 ['ENST00000545220.1_1_12:7343495-7354840:+|nuORF'] 33717 6724 GLHSNGFSL True PC9_epitope_Rep4 930.45593010022 930.45482993586 33.054 2 -0.8068899735622781 0.24966139304342813 1.0 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 86965 16028 QLWNGIISI True PC9_epitope_Rep2 1042.5811306133398 1042.58002993586 66.906 2 -0.8069367605825117 0.24968301538816207 1.0 ['nc|ENSG00000140563|Q6DN12-2|MCTP2', 'ENSG00000140563|ENST00000357742|MCTP2', 'ENST00000456504.5_1_15:94858078-95022260:+|nuORF'] 19058 6881 ELFPSPDP True H1975_Epitope_Rep3 900.4228986364399 900.42180993586 31.426 2 -0.8069376186181985 0.24968301538816207 1.0 ['ENSG00000175220|ENST00000311956|ARHGAP1', 'ENST00000526423.1_1_11:46700589-46702208:-|nuORF'] 59305 17154 LFHLQRAGHN True H1975_Epitope_Rep2 1191.6261237431497 1191.62446490379 71.264 3 -0.8069605827785524 0.24968663103145217 1.0 ['ENSG00000139131|ENST00000324868|YARS2'] 132151 6411 VTVLNTSVA True PC9_epitope_Rep5 902.50729696674 902.50618993586 29.637 2 -0.806978878323903 0.24968663103145217 1.0 ['ENSG00000184954|ENST00000327335|OR6C70'] 60327 22521 LGSKQMQQI True PC9_epitope_Rep5 1031.54336520563 1031.54226993586 91.631 2 -0.8069811822609906 0.24968663103145217 1.0 ['ENST00000588088.1_1_18:57491253-57491433:+|nuORF'] 13821 6678 DQLFDYCD True PC9_epitope_Rep1 1017.3749624678499 1017.37386993586 30.491 2 -0.80698379046203 0.24969744121715076 1.0 ['nc|ENSG00000163576|Q8N7U6-3|EFHB', 'ENSG00000163576|ENST00000295824|EFHB'] 88743 18026 QTLSKLIDYIY True PC9_epitope_Rep2 1355.7336680731098 1355.73256993586 74.642 2 -0.8070194651980105 0.24971186538350718 1.0 ['nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF'] 43142 11243 IFDLQNKV True PC9_epitope_Rep2 975.53893144819 975.53782993586 48.572 2 -0.8070754553738764 0.24971186538350718 1.0 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.E1748Rfs*44|1|0.18|ENSG00000122728|chr9:32630339-32630339|T/-|frameshift_variant', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 96981 5563 SAYMYYLK True NCI_RA007_Epitope_Rep3 1037.4892043744499 1037.4881099358602 28.876 2 -0.8070898392139668 0.24971186538350718 1.0 ['ENSG00000120800|ENST00000261637|UTP20'] 136414 5526 WTWCQWERAVW True H1975_Epitope_Rep3 1549.69248905081 1549.6913899358601 26.303 2 -0.8071245981665375 0.24971186538350718 1.0 ['ENST00000304987.3_1_11:111596525-111596654:+|nuORF'] 124199 20414 VGTAQRLLQRP True PC9_epitope_Rep6 1237.7255034312498 1237.7244099358602 91.226 2 -0.8072049262517649 0.24975148747352802 1.0 ['ENSG00000167971|ENST00000343516|CASKIN1', 'CASKIN1|p.G330Afs*49|1|0.24|ENSG00000167971|chr16:2186766-2186766|C/-|frameshift_variant'] 136205 23398 WRRWRILFKMG True NCI_RA007_Epitope_Rep1 1547.8659771690297 1547.86432490379 96.357 3 -0.8072395520173816 0.2497731037960095 1.0 ['ENST00000467566.1_1_2:109065689-109066146:+|nuORF', 'ENST00000478207.1_1_2:109065689-109068870:+|nuORF', 'ENST00000309863.10_1_2:109065689-109067532:+|nuORF'] 140620 25170 YRRQLQARTIE True PC9_epitope_Rep1 1432.7898945929594 1432.7887899358602 101.7 2 -0.8072417047118171 0.2497731037960095 1.0 ['ENSG00000148798|ENST00000369849|INA'] 39329 21645 HIVTQVHCW True PC9_epitope_Rep2 1121.54403391197 1121.54292993586 88.732 2 -0.8073035506166069 0.24977671497306175 1.0 ['ENST00000319074.5_1_14:23567332-23567638:+|nuORF'] 59416 16653 LFLTPEDLDDP True H1975_Epitope_Rep2 1273.60779885365 1273.6067099358602 69.286 2 -0.8073168495720114 0.24977671497306175 1.0 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 105349 12027 SRQRPQMKV True NCI_RA007_Epitope_Rep3 1128.6185958345598 1128.61693490379 54.433 3 -0.807331402861966 0.24977671497306175 1.0 ['ENSG00000092470|ENST00000263795|WDR76', 'ENST00000381246.6_1_15:44119194-44120163:+|nuORF'] 123713 14276 VGREGKGG True NCI_RA007_Epitope_Rep3 758.4035006045399 758.4029549679301 63.478 1 -0.8073686017017678 0.24978032583800291 1.0 ['ENST00000426163.5_1_2:208030425-208030898:-|nuORF'] 30453 10623 GAFLDIAEEK True PC9_epitope_Rep6 1091.5498900547097 1091.5487899358602 51.679 2 -0.8073696027568514 0.24978032583800291 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 104144 6519 SQERKHVCK True NCI_RA007_Epitope_Rep5 1113.5713112889698 1113.57020993586 31.74 2 -0.8073916237057616 0.24978032583800291 1.0 ['ENSG00000118156|ENST00000391901|ZNF541', 'nc|ENSG00000118156|Q9H0D2-2|ZNF541'] 127321 24458 VMIFRCAKLVK True NCI_RA007_Epitope_Rep2 1306.7617549109398 1306.76064993586 102.75 2 -0.8074600004561769 0.24980553714960677 1.0 ['ENSG00000283324|ENST00000636087|CTXND2'] 129435 22502 VRGRARAA True PC9_epitope_Rep1 855.5151167421899 855.51400993586 91.355 2 -0.8075639628569766 0.24982355059416636 1.0 ['ENST00000591735.2_1_19:1491211-1495711:+|nuORF'] 138010 21932 YFTNELKQF True PC9_epitope_Rep2 1188.5815245361598 1188.5804299358601 89.838 2 -0.8075812368167727 0.24982355059416636 1.0 ['ENST00000466777.1_1_3:172236192-172241222:-|nuORF'] 129270 13011 VQVHLHWWLWW True H1975_Epitope_Rep3 1588.8091734855598 1588.8080699358602 55.281 2 -0.8076376667582047 0.24982355059416636 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF'] 100655 16775 SLDIQHVLDKL True NCI_RA007_Epitope_Rep1 1279.71360133487 1279.71250993586 69.378 2 -0.8076562169573946 0.2498343560049549 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 18180 12095 EILEIQKP True PC9_epitope_Rep2 968.5542471591599 968.55314993586 51.832 2 -0.8077184004045244 0.2498739683408472 1.0 ['UTRN|p.N959I|1|0.11|ENSG00000152818|chr6:144462676-144462676|A/T|missense_variant'] 101405 17002 SLKMWFVFR True PC9_epitope_Rep1 1212.6477707045199 1212.64666993586 70.221 2 -0.8077481801325916 0.2498991761249064 1.0 ['nc|ENSG00000132437|P20711-3|DDC', 'ENSG00000132437|ENST00000444124|DDC', 'GRB10-DDC|2|fusion', 'GRB10-DDC|1|fusion', 'nc|ENSG00000132437|P20711-4|DDC'] 63532 9247 LLYYSRTMAK True NCI_RA007_Epitope_Rep2 1244.65872931104 1244.65762993586 40.58 2 -0.8077626481558581 0.24990997997954745 1.0 ['nc|ENSG00000232388|A0A096LP01-2|SMIM26', 'ENSG00000232388|ENST00000411646|SMIM26'] 27531 10933 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42374496793 46.939 1 -0.8077913678644418 0.24991718396681598 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 51021 1688 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 8.7786 3 -0.8077931047443667 0.24991718396681598 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 42017 7430 IDGQGNHVP True H1975_Epitope_Rep1 935.4460936925099 935.44498993586 33.583 2 -0.807822960768984 0.24994238967622998 1.0 ['GATA3|p.R306Sfs*49|1|0.4|ENSG00000107485|chr10:8064134-8064134|G/-|frameshift_variant', 'nc|ENSG00000107485|P23771|GATA3', 'ENSG00000107485|ENST00000379328|GATA3'] 138070 14510 YGETWHKGGIL True PC9_epitope_Rep1 1259.6298717109098 1259.6287699358602 60.637 2 -0.8078831981056814 0.24994959241869977 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 64377 20919 LPLNCPPRV True PC9_epitope_Rep2 1007.55862134695 1007.55752993586 85.911 2 -0.8079134795585311 0.24994959241869977 1.0 ['ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 46543 8164 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 38.086 2 -0.8079327943473079 0.24996039689511657 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 58241 9406 LELLDKIER True PC9_epitope_Rep1 1127.65502382959 1127.6533649037901 41.039 3 -0.8079523691028399 0.24996039689511657 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 15855 4261 EDFMKLYNHLE True NCI_RA007_Epitope_Rep2 1437.6598515098497 1437.6582149037902 21.212 3 -0.8079631906331589 0.24996039689511657 1.0 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM', 'FANCM|p.D696Tfs*8|1|0.16|ENSG00000187790|chr14:45170670-45170670|G/-|frameshift_variant'] 82570 3930 PPVMCVCVC True PC9_epitope_Rep2 949.38937338749 949.38826993586 20.381 2 -0.8079877659473447 0.24996039689511657 1.0 ['ENST00000529335.6_1_11:117708738-117708825:-|nuORF'] 15451 2748 EALILYYDDTY True H1975_Epitope_Rep3 1377.6340136014899 1377.6323549037902 14.653 3 -0.8079986451457178 0.24996039689511657 1.0 ['nc|ENSG00000111481|P61923-3|COPZ1'] 138100 7683 YGGLRGAI True PC9_epitope_Rep5 805.4446371405298 805.44354993586 34.497 2 -0.8080898773689039 0.250028801843318 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 116793 5016 TVEDAAQR True NCI_RA007_Epitope_Rep2 888.4301092751998 888.42900993586 24.134 2 -0.8082245804749124 0.25005400267853284 1.0 ['nc|ENSG00000083123|P21953-2|BCKDHB', 'ENSG00000083123|ENST00000320393|BCKDHB', 'BCKDHB|p.G178Efs*52|1|0.12|ENSG00000083123|chr6:80168929-80168929|G/-|frameshift_variant'] 129813 22356 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 90.809 2 -0.8082894782668162 0.25007200046080297 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 34400 11211 GPGTGFLYL True PC9_epitope_Rep5 923.4752685624699 923.47416993586 48.111 2 -0.8082920833211125 0.25007200046080297 1.0 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 106200 7154 STDSKDVCRMF True H1975_Epitope_Rep1 1287.5587575695897 1287.5576499358601 32.541 2 -0.8082953220090427 0.25007200046080297 1.0 ['ENSG00000182898|ENST00000368806|TCHHL1'] 136355 8962 WTHFHHANGIL True NCI_RA007_Epitope_Rep3 1331.65233849099 1331.65069490379 42.345 3 -0.8083178404004876 0.2500827993376053 1.0 ['ENST00000271277.10_1_1:112938840-112954920:+|nuORF'] 131087 6182 VTDVIADR True H1975_Epitope_Rep3 887.4712458111899 887.47014993586 28.791 2 -0.8083704683859012 0.2501043961582214 1.0 ['nc|ENSG00000169855|Q9Y6N7-6|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-5|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-4|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-3|ROBO1', 'ENSG00000169855|ENST00000464233|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-2|ROBO1', 'ENST00000484514.1_1_3:78710132-78763649:-|nuORF'] 3790 20555 AGTPVPEPLP True PC9_epitope_Rep3 976.5229470308799 976.52184993586 84.328 2 -0.8084033882251589 0.2501043961582214 1.0 ['ENSG00000189319|ENST00000337318|FAM53B'] 37984 20859 HAHMHHRHR True PC9_epitope_Rep3 1217.5849447208502 1217.5832849037902 85.507 3 -0.8084253585173972 0.25011519410206196 1.0 ['VGLL3|p.H243D|1|0.36|ENSG00000206538|chr3:86968800-86968800|G/C|missense_variant', 'nc|ENSG00000206538|A8MV65-2|VGLL3', 'ENSG00000206538|ENST00000398399|VGLL3'] 132515 5434 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep2 1029.44371111445 1029.4426099358602 26.293 2 -0.80847817416548 0.2501259917349422 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 92409 7431 RLQEQFDEQSK True NCI_RA007_Epitope_Rep2 1406.6790067312998 1406.67790993586 33.531 2 -0.8085979995180292 0.2501367890568755 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 139393 24517 YLNKILLG True NCI_RA007_Epitope_Rep2 932.5695033004799 932.56840993586 102.99 2 -0.8086175836079443 0.2501439843345044 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 24989 16516 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 69.025 2 -0.8086306266612757 0.2501439843345044 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140688 5154 YRWLWWQPWW True PC9_epitope_Rep2 1605.7669743204096 1605.76531490379 25.202 3 -0.8086814554328944 0.2501619753797423 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 77708 18349 NTKVMKIGV True PC9_epitope_Rep2 988.5739370579198 988.57282993586 75.91 2 -0.808705412374794 0.2501619753797423 1.0 ['OR51B6|p.Q138K|1|0.05|ENSG00000176239|chr11:5351919-5351919|C/A|missense_variant'] 129814 22998 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 93.257 2 -0.8087054164951333 0.2501619753797423 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 119390 15008 VAPQGTAMAV True PC9_epitope_Rep5 943.4797023199098 943.47860993586 62.731 2 -0.8087958666058414 0.25019796420807117 1.0 ['ENSG00000176919|ENST00000371634|C8G'] 10513 8637 CKVCGRGYTSK True H1975_Epitope_Rep1 1200.5743480640797 1200.57324993586 38.151 2 -0.808813941408364 0.25019796420807117 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 110736 13647 TGGGGGGD True H1975_Epitope_Rep3 576.21396849936 576.2134249679301 57.784 1 -0.8088522234145031 0.25020875925019437 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 61041 14901 LIFLFKWYMIS True H1975_Epitope_Rep1 1459.7937662318698 1459.7926699358602 62.553 2 -0.8088693103297285 0.2502159516268356 1.0 ['ENST00000463645.1_1_2:132491378-132509159:+|nuORF'] 102435 6811 SLTQSHLR True NCI_RA007_Epitope_Rep3 940.50902830224 940.50792993586 33.895 2 -0.8088863924865626 0.2502159516268356 1.0 ['ENST00000564998.1_3_16:84164915-84178722:-|nuORF'] 73865 18723 NARNARSL True PC9_epitope_Rep4 900.488961564 900.48786993586 80.099 2 -0.8089402488051795 0.2502519363105007 1.0 ['ENSG00000165182|ENST00000379211|CXorf58'] 88091 19373 QRRRGQPLRRF True NCI_RA007_Epitope_Rep3 1468.8599802717997 1468.8583349037901 84.556 3 -0.8089542591023954 0.2502519363105007 1.0 ['ENST00000420651.2_1_6:111804764-111824499:+|nuORF', 'ENST00000438298.6_1_6:111804755-111895827:+|nuORF', 'ENST00000532353.1_1_6:111804764-111919116:+|nuORF', 'ENST00000532226.1_1_6:111804740-111812267:+|nuORF', 'ENST00000525151.5_1_6:111804740-111824521:+|nuORF'] 15692 8832 EAVQEITEY True H1975_Epitope_Rep1 1080.49752012868 1080.4969749679299 38.895 1 -0.8089921844599324 0.25027352297593 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 81092 15382 PITTLGTI True H1975_Epitope_Rep3 814.48001958974 814.4794749679301 64.578 1 -0.8089934050893559 0.25027352297593 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 105267 4544 SRLGEHEF True PC9_epitope_Rep3 973.4617437566501 973.46064993586 22.571 2 -0.8090245124152479 0.2502987115813719 1.0 ['nc|ENSG00000075340|P35612-2|ADD2', 'nc|ENSG00000075340|P35612-8|ADD2', 'nc|ENSG00000075340|P35612-9|ADD2', 'nc|ENSG00000075340|P35612-4|ADD2', 'nc|ENSG00000075340|P35612-3|ADD2', 'ENSG00000075340|ENST00000264436|ADD2'] 19588 5277 ELQKKAIL True NCI_RA007_Epitope_Rep3 941.5909670210498 941.58986993586 27.765 2 -0.8090658253431379 0.25030950392998014 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 56969 9516 LDQYLPPNGHP True H1975_Epitope_Rep2 1249.6091362663299 1249.60802993586 41.572 2 -0.8091257173004168 0.25033469129226826 1.0 ['nc|ENSG00000100146|P56693|SOX10', 'ENSG00000100146|ENST00000396884|SOX10'] 83064 7385 PSLPSPPAVP True H1975_Epitope_Rep2 960.5280324113199 960.52692993586 33.346 2 -0.8091937542650461 0.25034544303068684 1.0 ['ENST00000588016.1_1_19:45556410-45561362:+|nuORF'] 15400 8541 EAIQDRIL True H1975_Epitope_Rep3 956.5290950404799 956.52798993586 37.841 2 -0.8091966321507045 0.25034544303068684 1.0 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112', 'ENST00000498289.5_1_1:169773308-169819597:+|nuORF'] 74334 20021 NENLLAELQ True PC9_epitope_Rep4 1042.5294889632999 1042.52838993586 85.146 2 -0.8092257235962873 0.25034544303068684 1.0 ['PMFBP1|p.R666L|1|0.21|ENSG00000118557|chr16:72128748-72128748|C/A|missense_variant'] 15431 5219 EALEEFKA True NCI_RA007_Epitope_Rep1 935.4600124211498 935.45890993586 24.383 2 -0.8092415650991222 0.25034544303068684 1.0 ['ENSG00000167972|ENST00000301732|ABCA3'] 67566 10386 LSTSGLLIHC True PC9_epitope_Rep4 1042.5481162329 1042.5470099358602 47.651 2 -0.8092508134271333 0.25034544303068684 1.0 ['SLITRK6|p.P340T|1|0.32|ENSG00000184564|chr13:85795491-85795491|G/T|missense_variant'] 59028 12876 LEVPQIQTRWK True H1975_Epitope_Rep1 1396.7826839542001 1396.7815899358602 54.598 2 -0.809281023271589 0.25034544303068684 1.0 ['GRIK1|p.H130Q|1|0.34|ENSG00000171189|chr21:29689882-29689882|G/T|missense_variant'] 57404 7859 LEARELGVA True H1975_Epitope_Rep3 956.5290950404799 956.52798993586 35.205 2 -0.8093074754718974 0.25034544303068684 1.0 ['ENST00000336314.8_2_5:154194701-154194878:+|nuORF'] 136170 19900 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 83.458 2 -0.8093101405418437 0.25034544303068684 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 82193 8236 PNVHFTHA True PC9_epitope_Rep4 921.4456997696899 921.44460993586 39.142 2 -0.8093295069081269 0.25034544303068684 1.0 ['ENST00000278426.7_2_11:57263521-57268513:-|nuORF'] 121536 15902 VFATDDGF True PC9_epitope_Rep5 870.3759484440199 870.37484993586 66.157 2 -0.8093506462930573 0.2503490263245009 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant'] 4373 11010 AILTFRLPYC True NCI_RA007_Epitope_Rep1 1195.6423509709098 1195.64071490379 46.822 3 -0.8093603350562323 0.2503490263245009 1.0 ['ENSG00000169208|ENST00000641040|OR10G3'] 129819 22880 VRRLPGGG True PC9_epitope_Rep3 810.4824196315798 810.48132993586 93.274 2 -0.8093756349604896 0.2503490263245009 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 20279 9770 ENQRMLKSV True PC9_epitope_Rep4 1103.57572796307 1103.57462993586 45.221 2 -0.8094448192732315 0.2503742084052965 1.0 ['ENSG00000256087|ENST00000221315|ZNF432'] 121607 7665 VFFRTNDAK True H1975_Epitope_Rep1 1096.5665431783598 1096.5654499358602 34.455 2 -0.8094617559897447 0.25038495301414615 1.0 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 18251 10495 EIQEDKVP True H1975_Epitope_Rep3 956.4814761417199 956.48036993586 45.432 2 -0.8094845131508531 0.25038495301414615 1.0 ['INSRR|p.L1074Cfs*19|1|0.18|ENSG00000027644|chr1:156842414-156842414|A/-|frameshift_variant', 'ENSG00000027644|ENST00000368195|INSRR', 'INSRR|p.R769L|1|0.15|ENSG00000027644|chr1:156845207-156845207|C/A|missense_variant'] 136172 20168 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 84.522 2 -0.8094909241508834 0.25038495301414615 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 25133 15382 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 66.84 2 -0.8094955398759212 0.25038495301414615 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 123031 10449 VGINRWRFLL True NCI_RA007_Epitope_Rep5 1272.74551059984 1272.7444099358602 46.824 2 -0.809504544464231 0.25038495301414615 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'ENSG00000008405|ENST00000008527|CRY1'] 94626 23742 RRVETILE True PC9_epitope_Rep4 1014.5821932424999 1014.58108993586 99.699 2 -0.8095388633709366 0.25038495301414615 1.0 ['ENSG00000171695|ENST00000302096|LKAAEAR1'] 56930 10683 LDQKIVDF True PC9_epitope_Rep6 976.5229470308799 976.52184993586 51.907 2 -0.8095397520162492 0.25038495301414615 1.0 ['ENST00000272645.8_1_2:128605232-128605382:-|nuORF'] 136173 20266 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 84.895 2 -0.8095543003596916 0.25038495301414615 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 75457 7756 NKEILLTTQLD True H1975_Epitope_Rep3 1286.7081816012599 1286.70708993586 34.818 2 -0.8095673411375263 0.25038495301414615 1.0 ['nc|ENSG00000276141|Q1A5X7|WHAMMP3', 'nc|ENSG00000276141|Q1A5X7-2|WHAMMP3'] 122005 11030 VFVIAGAT True H1975_Epitope_Rep1 776.4432401582 776.44214993586 47.389 2 -0.8095910860251132 0.2503957176159093 1.0 ['VPS45|p.G508A|1|0.04|ENSG00000136631|chr1:150110525-150110525|G/C|missense_variant'] 23428 18926 EVTDKYFH True PC9_epitope_Rep5 1037.48181049489 1037.4807099358602 77.821 2 -0.8096353157630958 0.2503957176159093 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.P3771S|1|0.1|ENSG00000138759|chr4:78539306-78539306|C/T|missense_variant'] 95848 23636 RYKHEILRLR True PC9_epitope_Rep4 1382.8258861788597 1382.82424490379 99.257 3 -0.8096369897923216 0.2503957176159093 1.0 ['ENST00000482878.5_1_16:772680-772797:-|nuORF', 'ENST00000481804.5_1_16:772680-773505:-|nuORF', 'ENST00000485091.5_1_16:772680-775160:-|nuORF', 'ENSG00000162004|ENST00000345165|CCDC78'] 102698 12660 SLYYHIRMSKM True PC9_epitope_Rep1 1427.70536223363 1427.70426993586 53.565 2 -0.8096607864931257 0.2503957176159093 1.0 ['OR2L13|p.P132H|1|0.25|ENSG00000196071|chr1:248099770-248099770|C/A|missense_variant'] 120900 4044 VENLCSYKI True NCI_RA007_Epitope_Rep2 1067.53213181559 1067.53102993586 20.369 2 -0.8096778819016198 0.2503957176159093 1.0 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 19389 8591 ELLTFQEWYYK True H1975_Epitope_Rep3 1518.7394817295396 1518.7383899358601 38.036 2 -0.8097357884150244 0.2504424651423802 1.0 ['CARD11|p.R179W|1|0.05|ENSG00000198286|chr7:2944361-2944361|G/A|missense_variant'] 61327 9681 LIRIYYWYWRR True NCI_RA007_Epitope_Rep4 1686.91470118326 1686.9136099358602 44.087 2 -0.8097592598373037 0.2504424651423802 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 88267 6077 QSEEEVKGSMK True H1975_Epitope_Rep3 1250.5812668359797 1250.58016993586 28.388 2 -0.8097822076692749 0.2504424651423802 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 63787 6896 LNFC[Carbamidomethyl]FKERLQA True H1975_Epitope_Rep1 1424.72345510535 1424.7223499358602 31.565 2 -0.8098032774607804 0.2504496467575073 1.0 ['ENSG00000160994|ENST00000292574|CCDC105'] 86220 12101 QILAVDEKIKV True PC9_epitope_Rep4 1254.75473787086 1254.7531049037902 54.351 3 -0.8098316810292191 0.2504496467575073 1.0 ['ENSG00000278803|ENST00000458091|PWWP4'] 128014 11177 VPISAVWVHKR True H1975_Epitope_Rep3 1290.75607528354 1290.7549699358601 48.09 2 -0.8098411673560407 0.25046043165467624 1.0 ['ENST00000589123.5_2_19:3467023-3467371:+|nuORF'] 30398 3371 GAEIKELSAK True NCI_RA007_Epitope_Rep2 1044.5815245361598 1044.5804299358601 17.772 2 -0.8098517502773729 0.25047121624149293 1.0 ['nc|ENSG00000290720|Q5EBM4-2|ZNF542P', 'nc|ENSG00000290720|Q5EBM4|ZNF542P', 'ENST00000468396.5_1_19:56884531-56888546:+|nuORF', 'ENST00000467807.5_1_19:56884531-56888546:+|nuORF'] 116522 22342 TTSFAGSS True H1975_Epitope_Rep2 756.3289982516001 756.32790993586 92.328 2 -0.8098826272701453 0.25047839661597343 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20', 'ENST00000457750.1_1_3:195341833-195346985:+|nuORF'] 138098 7804 YGGLRGAI True PC9_epitope_Rep3 805.4446371405298 805.44354993586 35.01 2 -0.809926038561114 0.25047839661597343 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 55559 19862 LAGSLGAPL True PC9_epitope_Rep2 797.46470387877 797.4641549679301 81.791 1 -0.810014115625219 0.25053231282730043 1.0 ['ENST00000336798.11_2_1:31344561-31344780:-|nuORF'] 68887 11960 LTNHRKIY True H1975_Epitope_Rep2 1043.58761297611 1043.58650993586 51.083 2 -0.8100299576786961 0.25053231282730043 1.0 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 37999 5170 HALLEKAQ True NCI_RA007_Epitope_Rep1 908.50796567308 908.50686993586 24.192 2 -0.8100330289925805 0.25053231282730043 1.0 ['ENSG00000175931|ENST00000319380|UBE2O'] 61840 5049 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 27.056 2 -0.8100522643215371 0.25053231282730043 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 93836 14679 RRCLRRWFHFW True NCI_RA007_Epitope_Rep1 1661.86262312409 1661.86152993586 61.15 2 -0.8100636891391814 0.25053231282730043 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4'] 47563 17218 IVTYRVTVAF True PC9_epitope_Rep4 1167.6651945904698 1167.6640899358601 74.237 2 -0.8101221654788584 0.250543095138759 1.0 ['SI|p.G318Vfs*10|1|0.64|ENSG00000090402|chr3:165062440-165062440|G/-|frameshift_variant'] 123400 11832 VGMVCIHWKGP True PC9_epitope_Rep3 1225.61000529681 1225.60890993586 50.531 2 -0.8101847620395295 0.25056462633963894 1.0 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 17901 14465 EIAAYRKLL True PC9_epitope_Rep4 1075.63897984263 1075.6378899358601 63.551 2 -0.8101913000037501 0.25056462633963894 1.0 ['ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'INA|p.E401Q|1|0.29|ENSG00000148798|chr10:103288370-103288370|G/C|missense_variant', 'NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 142946 8813 YYYYHYCYAWL True PC9_epitope_Rep2 1606.65912323386 1606.6574849037902 39.252 3 -0.810239240534435 0.25056462633963894 1.0 ['ENST00000360409.7_1_2:206547248-206547725:+|nuORF'] 37229 18552 GVRFTRNDKL True NCI_RA007_Epitope_Rep4 1204.6676542019597 1204.66654993586 80.269 2 -0.8102614016286228 0.25056462633963894 1.0 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 84820 2761 QEAEREEFFD True H1975_Epitope_Rep3 1298.5415101989797 1298.53987490379 14.704 3 -0.8102844560442581 0.25056462633963894 1.0 ['ENSG00000121879|ENST00000263967|PIK3CA'] 80879 14268 PHVAHLAL True PC9_epitope_Rep4 856.49192168612 856.49082993586 62.784 2 -0.8102896829843566 0.25056462633963894 1.0 ['ENST00000507801.1_1_4:8230952-8234403:+|nuORF'] 63688 13578 LMVFRHLCPP True PC9_epitope_Rep3 1211.63074074139 1211.62964993586 57.282 2 -0.8103369156027257 0.2506005725218292 1.0 ['ENST00000533077.5_1_11:67051600-67052038:+|nuORF'] 128077 20255 VPLALVSGL True PC9_epitope_Rep4 867.54295419947 867.54184993586 86.053 2 -0.8103649895814214 0.2506005725218292 1.0 ['ENST00000301463.8_1_12:53459285-53459390:-|nuORF'] 22752 11158 ETVELHKLKL True NCI_RA007_Epitope_Rep2 1208.71287305888 1208.71176993586 47.984 2 -0.8104331458828421 0.2506652474720596 1.0 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 66330 4737 LSGAAATEK True NCI_RA007_Epitope_Rep2 846.44469671018 846.44358993586 23.056 2 -0.8104502894215255 0.2506652474720596 1.0 ['nc|ENSG00000137449|Q7Z5Q1-8|CPEB2', 'ENSG00000137449|ENST00000538197|CPEB2'] 84070 8560 PVYVPYEIR True PC9_epitope_Rep1 1134.60734536118 1134.60568490379 37.764 3 -0.8104838232424971 0.2506652474720596 1.0 ['ENST00000468328.5_1_1:204951018-204956638:+|nuORF', 'NFASC|p.Q802P|1|0.36|ENSG00000163531|chr1:204981955-204981955|A/C|missense_variant', 'nc|ENSG00000163531|O94856|NFASC', 'nc|ENSG00000163531|O94856-8|NFASC', 'nc|ENSG00000163531|O94856-5|NFASC', 'nc|ENSG00000163531|O94856-13|NFASC', 'nc|ENSG00000163531|O94856-7|NFASC', 'ENSG00000163531|ENST00000339876|NFASC', 'nc|ENSG00000163531|O94856-6|NFASC', 'nc|ENSG00000163531|O94856-11|NFASC', 'nc|ENSG00000163531|O94856-3|NFASC', 'nc|ENSG00000163531|O94856-10|NFASC', 'NFASC|p.G1109Efs*44|1|0.14|ENSG00000163531|chr1:205009592-205009593|-/A|frameshift_variant', 'nc|ENSG00000163531|O94856-12|NFASC', 'nc|ENSG00000163531|O94856-4|NFASC', 'ENST00000512826.5_1_1:204926851-204957975:+|nuORF', 'ENST00000404977.6_1_1:204937408-204955114:+|nuORF'] 98704 14440 SGGCCGSD True NCI_RA007_Epitope_Rep5 684.1843252471999 684.18377496793 62.224 1 -0.8105409004766335 0.2506652474720596 1.0 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000582174.5_1_17:27210248-27224592:-|nuORF'] 127872 8633 VPGDGPEP True PC9_epitope_Rep3 766.34973369618 766.34862993586 38.158 2 -0.8105474344984847 0.2506652474720596 1.0 ['ENSG00000167874|ENST00000301599|TMEM88'] 109072 9016 TALENDSLH True PC9_epitope_Rep5 998.4668887067401 998.46578993586 39.625 2 -0.8105625315968155 0.2506652474720596 1.0 ['ENSG00000142875|ENST00000370685|PRKACB'] 126064 11695 VLEESNKIE True PC9_epitope_Rep3 1059.54480467427 1059.54370993586 50.005 2 -0.8105940637398644 0.2506688145441993 1.0 ['ENSG00000139780|ENST00000267273|METTL21C'] 94364 23092 RRRPRLLRRR True NCI_RA007_Epitope_Rep4 1433.9392336520098 1433.9381299358602 100.27 2 -0.8106037171151756 0.2506688145441993 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 92901 4122 RPFYTEWWRE True NCI_RA007_Epitope_Rep1 1468.6887835693599 1468.68712490379 20.108 3 -0.810615330675351 0.2506688145441993 1.0 ['ENST00000292599.3_1_5:179203171-179203312:+|nuORF'] 64239 17745 LPGVSLVSG True PC9_epitope_Rep5 827.47526856247 827.47472496793 73.274 1 -0.8106713815848879 0.2506759866528593 1.0 ['ENST00000597852.5_1_19:49838763-49839342:+|nuORF'] 68831 6620 LTLTWLYFWWE True H1975_Epitope_Rep1 1556.770387935 1556.76817987172 30.519 4 -0.8106786196436718 0.2506759866528593 1.0 ['ENST00000528031.1_1_11:75167699-75188792:-|nuORF', 'ENSG00000158555|ENST00000336898|GDPD5', 'ARRB1-GDPD5|1|fusion'] 113002 8115 TLLWNAYC True H1975_Epitope_Rep3 982.4582385993399 982.45714993586 36.19 2 -0.8108225676381549 0.2507299112600498 1.0 ['chr17:42951894-42952474|337|11.26|0.0|20.1|-|1|PTGES3L-AARSD1,None|1'] 33761 8219 GLKKFLKYVQL True NCI_RA007_Epitope_Rep5 1335.82784324147 1335.82674993586 38.294 2 -0.8108372923988513 0.25073708130186534 1.0 ['SHANK1|p.E185K|1|0.22|ENSG00000161681|chr19:50714269-50714269|C/T|missense_variant'] 19286 5111 ELKNAINKN True NCI_RA007_Epitope_Rep1 1042.5771078620598 1042.5760099358602 23.965 2 -0.8108396674778928 0.25073708130186534 1.0 ['ENSG00000176231|ENST00000322107|OR10H4', 'ENSG00000171936|ENST00000641646|OR10H3'] 117226 16615 TVLPSIHQL True PC9_epitope_Rep1 1006.5811306133401 1006.58002993586 68.736 2 -0.8109222132713694 0.25078018264183505 1.0 ['ENSG00000249115|ENST00000203166|HAUS5', 'ENST00000430749.2_1_19:36110914-36111043:+|nuORF'] 92397 11004 RLPTPEQI True PC9_epitope_Rep3 952.5341804209199 952.53308993586 47.316 2 -0.8109593803500876 0.25078018264183505 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 84437 7458 QAETLAKFREN True H1975_Epitope_Rep2 1305.66771377161 1305.6666099358602 33.634 2 -0.8109605527304238 0.25078018264183505 1.0 ['ENSG00000100012|ENST00000215812|SEC14L3'] 38667 14603 HFRRWTQRRRR True NCI_RA007_Epitope_Rep1 1653.9301255202897 1653.9290299358602 60.853 2 -0.8109736640326362 0.25078018264183505 1.0 ['ENST00000233468.4_1_2:24290678-24291201:-|nuORF'] 127499 17366 VNLPPELRRQ True NCI_RA007_Epitope_Rep4 1220.69895433024 1220.6978499358602 75.207 2 -0.8110042557538348 0.25078735061909485 1.0 ['nc|ENSG00000240505|O14836-3|TNFRSF13B', 'ENST00000581616.2_1_17:16844708-16875389:-|nuORF', 'ENSG00000240505|ENST00000261652|TNFRSF13B', 'ENST00000582931.5_1_17:16836228-16875389:-|nuORF', 'nc|ENSG00000240505|O14836-2|TNFRSF13B'] 65086 13574 LQLRELVNCRW True H1975_Epitope_Rep1 1428.76598834424 1428.76488993586 57.34 2 -0.8110133745528573 0.25078735061909485 1.0 ['ENSG00000108395|ENST00000262294|TRIM37', 'nc|ENSG00000108395|O94972-3|TRIM37'] 140777 9644 YSDHHRLMSC True H1975_Epitope_Rep1 1247.51756146395 1247.5164699358602 42.024 2 -0.8110367937197215 0.2507981247663148 1.0 ['ENST00000431717.6_2_3:111812256-111821694:+|nuORF'] 79422 6787 PATPTQTVVR True NCI_RA007_Epitope_Rep4 1068.5927579262 1068.5916699358602 32.727 2 -0.8110767753983112 0.25083765944290254 1.0 ['ENSG00000221916|ENST00000408991|C19orf73'] 41951 15802 IDEDAFRKLP True H1975_Epitope_Rep2 1202.62953735774 1202.62844993586 65.969 2 -0.8111630015162402 0.25085920536086626 1.0 ['ENSG00000083782|ENST00000261172|EPYC'] 13239 10936 DLSRQEEHASP True H1975_Epitope_Rep2 1267.5792926900301 1267.57818993586 47.098 2 -0.8111766841868295 0.25085920536086626 1.0 ['CCNI|p.G363E|1|0.05|ENSG00000118816|chr4:77048265-77048265|C/T|missense_variant'] 2330 8309 AEPPDFNPRD True H1975_Epitope_Rep2 1156.5149015283198 1156.51380993586 36.912 2 -0.8112134395352216 0.2508663704470615 1.0 ['ENSG00000120436|ENST00000366834|GPR31'] 49322 22489 KERIRIYKLNR True PC9_epitope_Rep5 1487.9048647755496 1487.90376993586 91.506 2 -0.8112574051365747 0.2508663704470615 1.0 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 46008 15511 ISGDLAKLI True PC9_epitope_Rep1 928.5593325396 928.55822993586 64.485 2 -0.8112994988361224 0.25088791430009344 1.0 ['ANXA6|p.R427K|1|0.18|ENSG00000197043|chr5:151122214-151122214|C/T|missense_variant'] 120878 18482 VENAFQLMD True PC9_epitope_Rep5 1065.4800962427298 1065.47957496793 76.113 1 -0.811305448551296 0.25088791430009344 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'nc|ENSG00000155367|Q5JR12-2|PPM1J'] 116625 6045 TVAGYGRYSGK True NCI_RA007_Epitope_Rep5 1157.5829215184897 1157.58127490379 29.933 3 -0.8114508539709746 0.25098495959508815 1.0 ['ENSG00000133216|ENST00000374630|EPHB2', 'nc|ENSG00000133216|P29323-3|EPHB2', 'nc|ENSG00000133216|P29323|EPHB2'] 51022 1997 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 10.347 3 -0.8114739711167991 0.25099572950666454 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 80957 13216 PIEYYWQRIRE True H1975_Epitope_Rep3 1551.78341223019 1551.7823099358602 56.089 2 -0.8115225170597353 0.25101005017900535 1.0 ['CLMP|p.V163E|1|0.12|ENSG00000166250|chr11:123083748-123083748|A/T|missense_variant'] 129825 25214 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 112.24 2 -0.8115307273984277 0.25101005017900535 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 102644 17303 SLWTEKLR True PC9_epitope_Rep1 1031.5763795860698 1031.5752899358602 71.371 2 -0.811530984732196 0.25101005017900535 1.0 ['ENST00000450804.3_1_11:72281759-72282275:+|nuORF'] 122726 15068 VGGIQNLI True PC9_epitope_Rep2 812.4756029156399 812.4745099358599 63.215 2 -0.8115342895038448 0.25101005017900535 1.0 ['nc|ENSG00000165887|Q9GZV1-2|ANKRD2', 'ENSG00000165887|ENST00000370655|ANKRD2', 'nc|ENSG00000165887|Q9GZV1|ANKRD2'] 140395 21860 YRETDKKKKK True NCI_RA007_Epitope_Rep2 1322.7670338900596 1322.7659299358602 90.627 2 -0.8116062763556381 0.2510567328981798 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 14097 5221 DRWRSRYYGK True NCI_RA007_Epitope_Rep2 1385.6952659321298 1385.6936249037901 24.928 3 -0.811606286616445 0.2510567328981798 1.0 ['ENSG00000141068|ENST00000644974|KSR1'] 127764 6326 VPCTKILKEL True NCI_RA007_Epitope_Rep4 1142.67331674602 1142.6716649037899 30.936 3 -0.8116434870760374 0.2510567328981798 1.0 4438 10222 AIRRRHNA True H1975_Epitope_Rep3 992.5740286006398 992.57292993586 44.366 2 -0.811658544178237 0.2510675005391417 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 67455 14855 LSSRLRLDPV True NCI_RA007_Epitope_Rep1 1154.6771562565 1154.6760499358602 61.841 2 -0.8116669065576717 0.25107826787049287 1.0 ['ENSG00000158008|ENST00000374280|EXTL1'] 70755 17847 LWWWSWRWWKL True H1975_Epitope_Rep3 1731.88267277899 1731.8815699358602 74.681 2 -0.8117055614999138 0.2511177882887416 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 130825 7790 VTARRTSLRP True PC9_epitope_Rep1 1155.68363861927 1155.6820049037901 34.788 3 -0.8117150874854161 0.2511284896926483 1.0 ['ENST00000569673.2_1_15:74044535-74044889:-|nuORF'] 97336 14392 SEAQVPHHCP True PC9_epitope_Rep1 1103.48182757823 1103.4807299358602 60.183 2 -0.8117197467314984 0.2511284896926483 1.0 ['ENST00000582314.5_1_17:17997264-18003464:+|nuORF'] 72749 2428 MNMKKSHEVQA True PC9_epitope_Rep3 1301.62202653249 1301.62039490379 13.395 3 -0.8117612734148968 0.2511284896926483 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 46839 14662 ITIFPESLQP True H1975_Epitope_Rep2 1143.6175756917098 1143.61646993586 61.558 2 -0.8117732651441906 0.2511284896926483 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 83587 9346 PVATEQLLST True NCI_RA007_Epitope_Rep3 1057.5655401188499 1057.56444993586 43.856 2 -0.811792743792879 0.2511284896926483 1.0 ['ENSG00000116199|ENST00000263733|FAM20B'] 71825 3853 MEKHSMLMDWK True NCI_RA007_Epitope_Rep2 1434.64579875218 1434.64414490379 19.622 3 -0.8118545209829524 0.2511392550637552 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1'] 113117 12163 TLPDANTDFYY True H1975_Epitope_Rep1 1318.5717476981001 1318.57064993586 51.803 2 -0.8119268735278053 0.25116078487745275 1.0 ['ENSG00000102543|ENST00000251108|CDADC1'] 87165 5464 QPFLRGFQKD True NCI_RA007_Epitope_Rep3 1234.64585612822 1234.64422490379 28.501 3 -0.8119301909998121 0.25116078487745275 1.0 ['ENST00000354416.7_1_X:118753384-118753732:-|nuORF'] 14871 6482 DWGLFAMEPIA True PC9_epitope_Rep3 1248.58489566444 1248.58378993586 29.959 2 -0.8119531623577693 0.25117154932007013 1.0 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 24990 16880 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 70.48 2 -0.8120453554115238 0.2511823134532178 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 116562 15702 TTVVPLIS True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 67.115 2 -0.8120652100034548 0.2511858559724019 1.0 ['ENSG00000136451|ENST00000581208|VEZF1', 'VEZF1|p.T108P|1|0.18|ENSG00000136451|chr17:57983105-57983105|T/G|missense_variant'] 100486 18317 SLAQLLGKISN True NCI_RA007_Epitope_Rep5 1142.6659228664598 1142.66482993586 77.257 2 -0.8121280609241169 0.2511858559724019 1.0 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 80665 15543 PGTEFSLGP True PC9_epitope_Rep2 903.4337976733099 903.43270993586 65.058 2 -0.8121296756414562 0.2511858559724019 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant'] 61771 5457 LLALHSAA True NCI_RA007_Epitope_Rep1 794.4650382319401 794.46394993586 25.298 2 -0.8121566304801622 0.2512109930861997 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 77959 12496 NVLRCIRESFF True H1975_Epitope_Rep3 1382.7128901422195 1382.71178993586 53.261 2 -0.8122776047634186 0.2512505030759501 1.0 ['UQCRQ|p.R41C|1|0.15|ENSG00000164405|chr5:132867002-132867002|C/T|missense_variant'] 51023 2065 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 10.695 3 -0.8122906897457244 0.2512612651459618 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 130326 17911 VSKDPSSYV True PC9_epitope_Rep3 980.48147614172 980.48036993586 74.097 2 -0.8123152857528924 0.2512755652011441 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF'] 91427 20230 RHLAHRLRRRH True NCI_RA007_Epitope_Rep2 1506.89809711602 1506.89644490379 83.721 3 -0.8123156168796604 0.2512755652011441 1.0 ['nc|ENSG00000141644|Q9UIS9-9|MBD1'] 62684 13525 LLLLLLLL True NCI_RA007_Epitope_Rep4 922.68307650074 922.68196993586 59.232 2 -0.8123205449630061 0.2512755652011441 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'SEMA6C|p.M8I|1|0.48|ENSG00000143434|chr1:151142598-151142598|C/G|missense_variant', 'EIF2AK3|p.E232Rfs*74|1|0.4|ENSG00000172071|chr2:88593345-88593345|C/-|frameshift_variant', 'ENSG00000184709|ENST00000371542|LRRC26', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'PCDHA8|p.W12G|1|0.22|ENSG00000204962|chr5:140841355-140841355|T/G|missense_variant', 'ENSG00000117899|ENST00000261758|MESD', 'ENSG00000182685|ENST00000328540|BRICD5', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000183971|ENST00000566435|NPW', 'ENSG00000070031|ENST00000176195|SCT', 'ENSG00000178473|ENST00000380433|UCN3', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'nc|ENSG00000117899|Q14696-2|MESD', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000121316|ENST00000240617|PLBD1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 44418 15798 ILGPLCMPLV True PC9_epitope_Rep3 1054.5918956211801 1054.5907899358601 65.921 2 -0.8123491492404789 0.2512755652011441 1.0 ['ENSG00000180815|ENST00000338883|MAP3K15'] 121096 19126 VERFLKTL True PC9_epitope_Rep1 1004.6018660579199 1004.60076993586 78.359 2 -0.8124137443792848 0.25131507085573024 1.0 ['ENST00000500538.6_1_4:68586658-68594368:+|nuORF'] 125011 11493 VIAGTALASV True PC9_epitope_Rep4 900.5280324113199 900.52692993586 51.969 2 -0.8124683044542599 0.2513258310697193 1.0 ['nc|ENSG00000089060|Q6J4K2-2|SLC8B1', 'SLC8B1|p.G557Mfs*10|1|0.56|ENSG00000089060|chr12:113299863-113299864|-/AT|frameshift_variant', 'ENSG00000089060|ENST00000680972|SLC8B1', 'ENST00000553238.5_1_12:113745708-113770716:-|nuORF'] 41788 11969 IARKLSFP True PC9_epitope_Rep6 930.5650866263799 930.56398993586 57.303 2 -0.8125379672538503 0.2513653348663409 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 57282 16568 LDYVLVVP True PC9_epitope_Rep2 916.5269697821599 916.52586993586 68.966 2 -0.812628664036188 0.25140483752748594 1.0 ['ENSG00000130702|ENST00000252999|LAMA5'] 79676 5733 PDSDDEILEHT True H1975_Epitope_Rep3 1269.5360904653699 1269.53498993586 27.08 2 -0.8126872661266622 0.25144072546455315 1.0 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 42198 20730 IDRRDLSMP True PC9_epitope_Rep1 1101.5600778989299 1101.5589899358602 84.565 2 -0.8126914810760627 0.25144072546455315 1.0 ['nc|ENSG00000185024|Q92994-8|BRF1'] 14257 8445 DSPAVAAVVP True H1975_Epitope_Rep3 924.4916469025999 924.49109496793 37.467 1 -0.8127346622445029 0.2514514830995631 1.0 ['ENST00000358729.8_1_1:110163725-110168306:+|nuORF'] 129821 26475 VRRLPGGG True PC9_epitope_Rep4 810.4824196315798 810.48132993586 112.5 2 -0.8127989486495001 0.2514909822519221 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 18549 7181 EKLPEHTK True NCI_RA007_Epitope_Rep4 980.5290950404801 980.52798993586 34.244 2 -0.8128326320304017 0.25153039229774393 1.0 ['nc|ENSG00000164509|Q8NI17-6|IL31RA', 'nc|ENSG00000164509|Q8NI17|IL31RA', 'nc|ENSG00000164509|Q8NI17-12|IL31RA', 'ENSG00000164509|ENST00000652347|IL31RA'] 24991 16964 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 70.84 2 -0.8128902367517914 0.25153039229774393 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57050 9787 LDSAHLHP True NCI_RA007_Epitope_Rep1 888.44536541652 888.44426993586 42.071 2 -0.8129310888119609 0.25153039229774393 1.0 ['LTR7B_dup104|chr2:85657641-85658146:-|1.7768366350267806|0.0164712232699766|6.75|500.0|17|3|sense'] 19061 5545 ELFSDQTIRK True NCI_RA007_Epitope_Rep2 1235.6510010783097 1235.64990993586 26.185 2 -0.8129587680261899 0.25153039229774393 1.0 ['ENST00000492955.1_1_2:160758938-160759124:-|nuORF'] 82593 13085 PQAPTLPTTAP True PC9_epitope_Rep4 1092.58152453616 1092.5804299358601 58.223 2 -0.8129742600725888 0.25153039229774393 1.0 ['ENSG00000179846|ENST00000686631|NKPD1'] 113588 14680 TLVEKMNV True PC9_epitope_Rep5 932.50010341132 932.49900993586 61.471 2 -0.8130283362432441 0.25154114756218476 1.0 ['nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1', 'nc|ENSG00000196296|O14983-3|ATP2A1'] 116788 9773 TVEALNAVHG True PC9_epitope_Rep3 1009.5192586327698 1009.51816993586 42.546 2 -0.8130446453803369 0.25155181332260473 1.0 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'nc|ENSG00000139910|P51513-2|NOVA1', 'NOVA1|p.N180Tfs*6|1|0.11|ENSG00000139910|chr14:26448946-26448946|G/-|frameshift_variant'] 92575 3186 RMPGRGKG True PC9_epitope_Rep3 857.4653896684498 857.46428993586 17.279 2 -0.813083944655027 0.25155181332260473 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 79679 16976 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.4554749679301 70.122 1 -0.8130912348911381 0.25155181332260473 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 18948 8496 ELEKEYLQEK True H1975_Epitope_Rep1 1307.6608970556697 1307.65980993586 37.609 2 -0.8130939903017901 0.25155181332260473 1.0 ['ENST00000529615.1_1_11:27359677-27371953:-|nuORF', 'ENSG00000109881|ENST00000328697|CCDC34'] 68841 13231 LTLYQSNTIL True PC9_epitope_Rep2 1164.63903941228 1164.63739490379 56.171 3 -0.8130966484034066 0.25155181332260473 1.0 ['ENSG00000084207|ENST00000398606|GSTP1', 'GSTP1|p.K189Pfs*13|1|0.3|ENSG00000084207|chr11:67586505-67586506|-/CC|frameshift_variant', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'ENST00000494593.1_1_11:67352122-67352251:+|nuORF'] 132774 17814 VVITTLTTL True NCI_RA007_Epitope_Rep1 959.59029831471 959.58920993586 73.43 2 -0.8131046191843896 0.2515589528434725 1.0 ['HTR1E|p.I128Lfs*14|1|0.13|ENSG00000168830|chr6:87015716-87015716|A/-|frameshift_variant', 'ENSG00000168830|ENST00000305344|HTR1E'] 73980 4272 NDAPQFLEK True NCI_RA007_Epitope_Rep5 1060.5189242795998 1060.5178299358602 23.009 2 -0.813114413526769 0.2515589528434725 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'nc|ENSG00000132554|Q8NE09-2|RGS22'] 71640 15528 MDVFGVCLTI True PC9_epitope_Rep4 1096.5296892874399 1096.52858993586 67.652 2 -0.8132074814339159 0.2516128105288869 1.0 ['ENST00000558523.1_1_14:102821996-102829188:-|nuORF'] 80239 10465 PGAPQQVMTQI True PC9_epitope_Rep2 1168.5910436740398 1168.58938490379 45.571 3 -0.8133363806511527 0.25164145223625417 1.0 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 86799 7563 QLNLNNEWTL True H1975_Epitope_Rep1 1243.61970095003 1243.6186099358601 34.085 2 -0.8133405217481915 0.25164145223625417 1.0 ['ENSG00000136802|ENST00000372600|LRRC8A'] 26615 13451 FILNNEGKL True PC9_epitope_Rep6 1046.5760452329 1046.57494993586 63.431 2 -0.8133414528357107 0.25164145223625417 1.0 ['FMNL2|p.L1058Qfs*20|1|0.19|ENSG00000157827|chr2:152647799-152647800|TT/-|frameshift_variant', 'nc|ENSG00000157827|Q96PY5|FMNL2', 'ENSG00000157827|ENST00000288670|FMNL2'] 112963 18895 TLLNTIPGWLI True PC9_epitope_Rep5 1239.72270946659 1239.72106490379 77.699 3 -0.813382814578963 0.25164145223625417 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2'] 75193 7402 NICNNEGLT True NCI_RA007_Epitope_Rep2 976.42839502304 976.42728993586 33.417 2 -0.8134169502793255 0.2516522038963278 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1'] 86660 7781 QLHLKPGSP True PC9_epitope_Rep2 975.5501648382299 975.54906993586 35.302 2 -0.8134639729657145 0.2516593397120938 1.0 ['ENST00000493523.2_1_2:73302651-73316730:-|nuORF'] 14002 20690 DREELNYWI True PC9_epitope_Rep4 1236.5775017848798 1236.57640993586 87.744 2 -0.8134760114439137 0.2516593397120938 1.0 ['nc|ENSG00000079102|Q06455-6|RUNX1T1', 'nc|ENSG00000079102|Q06455-5|RUNX1T1', 'RUNX1T1|p.H434Qfs*17|1|0.2|ENSG00000079102|chr8:91975951-91975952|-/T|frameshift_variant', 'nc|ENSG00000079102|Q06455-4|RUNX1T1', 'nc|ENSG00000079102|Q06455-2|RUNX1T1', 'nc|ENSG00000079102|Q06455|RUNX1T1', 'nc|ENSG00000079102|Q06455-3|RUNX1T1', 'ENSG00000079102|ENST00000436581|RUNX1T1'] 114848 12936 TQNERRSVTK True H1975_Epitope_Rep1 1217.6476470333698 1217.64654993586 54.834 2 -0.8135092245637067 0.2516844570230006 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant'] 121443 9941 VEWMEDSWRQR True NCI_RA007_Epitope_Rep2 1520.6830465659198 1520.68194993586 43.295 2 -0.8135506595162458 0.2516987257760986 1.0 ['ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 22360 6095 ETEDPEPNY True H1975_Epitope_Rep2 1092.4247491112399 1092.42364993586 28.421 2 -0.8135626005200893 0.2516987257760986 1.0 ['ENSG00000158517|ENST00000289473|NCF1', 'nc|ENSG00000165178|A8MVU1|NCF1C', 'nc|ENSG00000290838|A6NI72|NCF1B', 'ENST00000486097.1_1_7:74197824-74199646:+|nuORF', 'ENST00000398421.6_1_7:74197704-74202433:+|nuORF', 'ENST00000455062.2_1_7:74197704-74203407:+|nuORF', 'ENST00000423083.1_1_7:72644023-72649727:+|nuORF'] 46460 5749 ISTVELQK True NCI_RA007_Epitope_Rep5 916.5229470308799 916.52184993586 28.801 2 -0.8135666258169068 0.2516987257760986 1.0 ['ENST00000510089.5_1_5:87494777-87494978:-|nuORF', 'TMEM161B|p.L470Pfs*15|1|0.31|ENSG00000164180|chr5:88196266-88196266|A/-|frameshift_variant', 'ENSG00000164180|ENST00000296595|TMEM161B'] 120444 6551 VEEQESRVHY True H1975_Epitope_Rep3 1274.58912909774 1274.58802993586 30.167 2 -0.8135736165599984 0.2516987257760986 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000478388.1_1_6:31999390-31999952:+|nuORF'] 11318 6557 DEKYWSRRYKN True NCI_RA007_Epitope_Rep1 1543.7531747310697 1543.7515349037901 29.521 3 -0.8135795830621677 0.2517094753778084 1.0 ['ENST00000594723.1_1_19:49134096-49134354:-|nuORF', 'ENSG00000105516|ENST00000222122|DBP'] 112564 16809 TLEIMPCPML True PC9_epitope_Rep1 1146.54871047986 1146.54760993586 69.481 2 -0.8135884427633018 0.25171641147913015 1.0 ['nc|ENSG00000185019|O94941-2|UBOX5', 'UBOX5|p.L449Afs*60|1|0.15|ENSG00000185019|chr20:3115359-3115378|GGAGCTGTCCCCTGGTCAGC/-|frameshift_variant', 'ENSG00000185019|ENST00000217173|UBOX5'] 128082 7579 VPLDLVQPP True H1975_Epitope_Rep3 976.5593325395998 976.55822993586 34.133 2 -0.8136142256109392 0.25171641147913015 1.0 ['nc|ENSG00000091129|Q92823-4|NRCAM'] 109121 4072 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 20.748 2 -0.8136232386574033 0.25171641147913015 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 129808 15150 VRRLPGGG True NCI_RA007_Epitope_Rep3 810.4824196315798 810.48132993586 67.107 2 -0.8136535619884296 0.25171641147913015 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 123702 9654 VGRARPAGW True NCI_RA007_Epitope_Rep2 968.5304324531597 968.52932993586 42.169 2 -0.8136657117203564 0.25171641147913015 1.0 ['nc|ENSG00000084112|Q8WYL5-2|SSH1', 'nc|ENSG00000084112|Q8WYL5-5|SSH1'] 133387 23713 VVVIRQER True H1975_Epitope_Rep3 997.60326304025 997.60216993586 98.895 2 -0.8136902811287915 0.25171641147913015 1.0 ['ENSG00000070886|ENST00000166244|EPHA8'] 62525 9801 LLIYDNNKRP True H1975_Epitope_Rep3 1244.6877209402 1244.68662993586 42.726 2 -0.8137035698665341 0.25171641147913015 1.0 ['nc|ENSG00000211644|P01701|IGLV1-51'] 116846 12514 TVERLGEAV True PC9_epitope_Rep1 972.5240096600398 972.52290993586 53.003 2 -0.8137040345562492 0.25171641147913015 1.0 ['nc|ENSG00000167614|Q9H313-5|TTYH1', 'ENSG00000167614|ENST00000376530|TTYH1', 'nc|ENSG00000167614|Q9H313-2|TTYH1', 'nc|ENSG00000167614|Q9H313-3|TTYH1', 'ENST00000487134.5_1_19:54927741-54947306:+|nuORF'] 83529 17674 PTTLVDKV True PC9_epitope_Rep6 871.5014833103099 871.50038993586 80.62 2 -0.8137245636833067 0.25171641147913015 1.0 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 80541 6206 PGPLSKQGS True NCI_RA007_Epitope_Rep5 869.46068112749 869.46013496793 30.548 1 -0.8137568188920619 0.25171641147913015 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 109085 11779 TALLEADVNIK True NCI_RA007_Epitope_Rep1 1185.6605031328502 1185.6594099358601 49.796 2 -0.8137727542888356 0.2517234445912564 1.0 ['ENSG00000100883|ENST00000216774|SRP54', 'ENST00000555535.1_1_14:35465915-35473764:+|nuORF', 'ENST00000555317.5_1_14:35465915-35468856:+|nuORF'] 81719 19151 PLNPRQGIF True PC9_epitope_Rep2 1040.5767139392399 1040.57560993586 79.035 2 -0.8138027691457749 0.2517234445912564 1.0 ['ENST00000588362.1_1_19:45683194-45684626:+|nuORF'] 22804 5582 EVAAVAVLMC True PC9_epitope_Rep2 1004.5034745395999 1004.50236993586 26.86 2 -0.8138327927014318 0.2517234445912564 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 777 5836 AAVSAVVGPAA True PC9_epitope_Rep5 911.5076313199098 911.50652993586 27.44 2 -0.8138354172987073 0.2517234445912564 1.0 ['ENSG00000170684|ENST00000303809|ZNF296'] 64497 22190 LPQRAHRPA True PC9_epitope_Rep4 1044.59409533888 1044.59298993586 93.599 2 -0.8138525818770707 0.2517234445912564 1.0 ['nc|ENSG00000129255|O75352-2|MPDU1'] 115510 16018 TRRPPATA True NCI_RA007_Epitope_Rep3 868.4878989348399 868.48680993586 70.686 2 -0.8138988412225378 0.2517234445912564 1.0 ['CLEC14A|p.P315Rfs*26|1|0.14|ENSG00000176435|chr14:38255079-38255079|G/-|frameshift_variant', 'CLEC14A|p.P441Rfs*24|1|0.17|ENSG00000176435|chr14:38254703-38254703|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 22252 8868 ETAIQFKPP True H1975_Epitope_Rep3 1029.5494961318898 1029.54838993586 39.113 2 -0.8139215174467033 0.25173419121343116 1.0 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF', 'HENMT1|p.L95Wfs*5|1|0.45|ENSG00000162639|chr1:108654831-108654831|G/-|frameshift_variant'] 58018 15390 LEHNLQLLID True PC9_epitope_Rep2 1206.66083748602 1206.6597499358602 64.48 2 -0.8140097659749667 0.2517844063707257 1.0 ['ENSG00000100109|ENST00000407690|TFIP11', 'TFIP11|p.E319K|1|0.14|ENSG00000100109|chr22:26499478-26499478|C/T|missense_variant'] 52711 14293 KMERLFDLYFY True H1975_Epitope_Rep1 1523.7482725914301 1523.74716993586 60.164 2 -0.8140430358398855 0.2517844063707257 1.0 ['ENSG00000214237|ENST00000465419|MINDY4B'] 118809 7687 VAAGKALE True NCI_RA007_Epitope_Rep5 757.43340375049 757.43230993586 36.271 2 -0.8141336624572022 0.25184536289743514 1.0 ['ENST00000488671.1_1_2:111144305-111181647:-|nuORF', 'ENST00000606848.1_1_2:111144305-111145031:-|nuORF', 'ENST00000454928.5_2_2:110705383-110742349:+|nuORF'] 18489 8223 EKERLRAQW True NCI_RA007_Epitope_Rep4 1214.6520041378196 1214.65090993586 38.419 2 -0.8141381541482853 0.25184536289743514 1.0 ['ENSG00000162460|ENST00000375782|TMEM82'] 122732 13575 VGGKLYHVFI True PC9_epitope_Rep3 1131.64406522307 1131.64240490379 57.271 3 -0.8141896289106617 0.25184536289743514 1.0 ['ENST00000400109.2_1_13:19879246-19879522:-|nuORF'] 16203 13804 EEEELASTPP True H1975_Epitope_Rep2 1100.4873493677999 1100.48624993586 58.244 2 -0.8142535012115614 0.2518524900913321 1.0 ['ENSG00000149136|ENST00000278412|SSRP1'] 112355 18032 TLAGKLDRR True PC9_epitope_Rep1 1028.60907669668 1028.6079699358602 74.152 2 -0.8142828061472646 0.2518524900913321 1.0 ['ENST00000581471.2_1_18:5238635-5238728:+|nuORF'] 2622 4612 AERYYNELR True H1975_Epitope_Rep3 1212.58873517492 1212.5870849037901 22.862 3 -0.8143545747941503 0.2518631266064531 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 19263 12290 ELKFHYMV True PC9_epitope_Rep5 1065.53173789277 1065.53064993586 52.263 2 -0.8143598809956484 0.2518631266064531 1.0 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000564547.1_1_16:88923507-88925305:+|nuORF', 'ENST00000561840.1_2_16:88923580-88926055:+|nuORF'] 69730 9363 LVERWRPSL True H1975_Epitope_Rep1 1154.6560268890998 1154.65492993586 40.922 2 -0.8143656433778749 0.2518631266064531 1.0 ['ENST00000582260.5_1_18:72163641-72167242:+|nuORF', 'ENST00000324262.8_1_18:72163648-72167242:+|nuORF'] 55210 19083 LADALPLHIAP True PC9_epitope_Rep2 1129.6495445263301 1129.64844993586 78.767 2 -0.8144003386299671 0.2518631266064531 1.0 ['ENSG00000186187|ENST00000335325|ZNRF1', 'nc|ENSG00000186187|Q8ND25-2|ZNRF1'] 113933 6983 TNWDDMEK True NCI_RA007_Epitope_Rep3 1037.4124106057297 1037.4113099358601 34.576 2 -0.8144095716978833 0.2518631266064531 1.0 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'POTEF|p.W786L|1|0.12|ENSG00000196604|chr2:130075115-130075115|C/A|missense_variant', 'POTEF|p.W786C|1|0.12|ENSG00000196604|chr2:130075114-130075114|C/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 63341 8818 LLTHTDIKPY True H1975_Epitope_Rep1 1199.65502382959 1199.65392993586 38.841 2 -0.8144223330759903 0.2518666360346907 1.0 ['nc|ENSG00000164920|Q8N2R0-3|OSR2', 'ENSG00000164920|ENST00000297565|OSR2'] 56507 6064 LDFITMLY True PC9_epitope_Rep2 1014.50960546586 1014.50850993586 28.72 2 -0.8144226402833655 0.2518666360346907 1.0 ['ENSG00000091317|ENST00000205636|CMTM6'] 41597 7256 IADERDRVQK True H1975_Epitope_Rep1 1228.6523980606396 1228.6513099358601 32.921 2 -0.8145409450094804 0.2518666360346907 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC'] 116160 5479 TSTSTSTSTIS True PC9_epitope_Rep3 1071.4931630242302 1071.4920699358602 26.149 2 -0.8145929754497603 0.25190609519707086 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C'] 8482 4332 ATREMVTRFME True NCI_RA007_Epitope_Rep1 1369.64824128033 1369.6465949037902 20.956 3 -0.814604205243713 0.2519167264895908 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 14843 16947 DVVKVLSKTTE True NCI_RA007_Epitope_Rep2 1217.68671788069 1217.68617496793 70.658 1 -0.8146259509443887 0.2519167264895908 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 120282 8438 VEDKMKLFPV True H1975_Epitope_Rep1 1204.65258130144 1204.6509449037899 37.382 3 -0.8146513498812535 0.2519167264895908 1.0 ['nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1', 'ENSG00000204956|ENST00000517417|PCDHGA1'] 51017 1215 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 6.3458 3 -0.814658943729613 0.2519167264895908 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 93302 21989 RPRTLLIE True H1975_Epitope_Rep1 996.6080140675199 996.60690993586 91.464 2 -0.8146635742873557 0.2519167264895908 1.0 ['nc|ENSG00000203666|Q5VUJ9|EFCAB2'] 45754 6191 ISAGGYIK True PC9_epitope_Rep3 807.44905381463 807.44794993586 28.854 2 -0.8146887609972513 0.25192746694232676 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 138786 2217 YITWTYFFR True NCI_RA007_Epitope_Rep5 1295.6338944621898 1295.63224490379 12.558 3 -0.814708768911866 0.2519345900391943 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 14256 8301 DSPAVAAVVP True H1975_Epitope_Rep1 924.4916469025999 924.49109496793 36.861 1 -0.8147271231038082 0.2519345900391943 1.0 ['ENST00000358729.8_1_1:110163725-110168306:+|nuORF'] 14449 4185 DTEKSRFFRFC True H1975_Epitope_Rep3 1434.6714192530599 1434.67032993586 21.216 2 -0.81477202021275 0.251959686450168 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 9206 8973 AVMLYYSN True H1975_Epitope_Rep2 959.4422541820301 959.44170496793 39.47 1 -0.8148432462242583 0.25198478214054987 1.0 ['ENSG00000135953|ENST00000258436|MFSD9'] 3587 14115 AGNGRWQQSL True PC9_epitope_Rep5 1115.54720471611 1115.5461099358602 59.305 2 -0.8148826700783873 0.2520241171403962 1.0 ['ENST00000515258.2_9:67786282-67786537:+|nuORF'] 24993 17172 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 71.689 2 -0.8148827485792556 0.2520241171403962 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 98673 15236 SGDSHPDFPED True H1975_Epitope_Rep2 1201.45236084141 1201.4512699358602 63.763 2 -0.8148967964604908 0.2520241171403962 1.0 ['ENSG00000171497|ENST00000307720|PPID'] 26777 9002 FKKRRRRARKY True H1975_Epitope_Rep1 1563.9698650739497 1563.9682049037901 39.532 3 -0.8149403506668982 0.2520241171403962 1.0 ['nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'nc|ENSG00000172403|Q9UMS6|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-3|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-5|SYNPO2'] 105212 14440 SRHLCCLQAL True PC9_epitope_Rep1 1142.5688687608201 1142.56723490379 60.367 3 -0.814947278462096 0.2520241171403962 1.0 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 61254 21163 LINRPILVL True PC9_epitope_Rep5 1049.6961007959299 1049.69500993586 86.457 2 -0.8149540736790819 0.25204185625906095 1.0 ['ENSG00000186765|ENST00000417245|FSCN2', 'nc|ENSG00000186765|O14926-2|FSCN2'] 22918 6685 EVEEDEYKAFY True NCI_RA007_Epitope_Rep3 1420.6034417491996 1420.60234993586 33.377 2 -0.8149625409483626 0.25204185625906095 1.0 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 58079 15488 LEIPYQKNI True PC9_epitope_Rep2 1116.61791004488 1116.6168099358601 64.849 2 -0.8149842484315044 0.25204185625906095 1.0 ['ENSG00000165953|ENST00000677451|SERPINA12'] 97878 17576 SELRPVTIV True PC9_epitope_Rep5 1012.5916952970399 1012.59058993586 72.615 2 -0.8150403934105521 0.25204185625906095 1.0 ['ENSG00000143199|ENST00000367851|ADCY10', 'ADCY10|p.K574Mfs*11|1|0.04|ENSG00000143199|chr1:167860959-167860960|-/GACA|frameshift_variant', 'nc|ENSG00000143199|Q96PN6-4|ADCY10', 'nc|ENSG00000143199|Q96PN6-2|ADCY10'] 137700 6858 YEKYNKWETIE True H1975_Epitope_Rep1 1501.7089098772497 1501.70780993586 31.423 2 -0.8150434673097166 0.25204185625906095 1.0 ['ENSG00000153002|ENST00000282957|CPB1'] 88880 8229 QVDWHEEEWEK True NCI_RA007_Epitope_Rep1 1513.6473722498497 1513.6462699358601 36.007 2 -0.815096641268535 0.25204185625906095 1.0 ['nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A'] 107045 10577 SVFTWDLWK True H1975_Epitope_Rep1 1180.59169529704 1180.5905899358602 45.638 2 -0.8151150013489458 0.25204185625906095 1.0 ['ENST00000256257.1_1_8:33405684-33405735:-|nuORF'] 15766 16442 ECVWTPLPP True H1975_Epitope_Rep2 1040.5001034113197 1040.4990099358602 68.464 2 -0.8152339331697838 0.25206694608715624 1.0 ['ENST00000586860.1_1_19:44506809-44506971:-|nuORF'] 55649 5864 LAKSKGQP True NCI_RA007_Epitope_Rep5 827.4865019525098 827.48540993586 29.241 2 -0.815369906894396 0.25214944953996754 1.0 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 21918 4891 ESDSELEER True PC9_epitope_Rep3 1092.45711186868 1092.45600993586 23.911 2 -0.8154180022636007 0.2521888904837089 1.0 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000575323.1_1_16:3580476-3582910:+|nuORF'] 135505 7689 WKCRNLSL True PC9_epitope_Rep5 1018.5382202555398 1018.53712993586 34.519 2 -0.8154299162351087 0.25219238442438247 1.0 ['ENST00000393785.6_1_3:114219230-114343790:-|nuORF'] 37601 6266 GVVQIVEV True PC9_epitope_Rep2 841.4909186266099 841.48982993586 29.499 2 -0.8154321723207019 0.25219238442438247 1.0 ['nc|ENSG00000140832|Q96A59-2|MARVELD3'] 37120 8382 GVPVAHAL True PC9_epitope_Rep4 762.4388234841 762.43772993586 39.699 2 -0.8154747616754766 0.25219238442438247 1.0 ['ENSG00000124608|ENST00000244571|AARS2'] 78963 8880 PAIARPQAL True PC9_epitope_Rep3 935.5552502186698 935.55414993586 39.106 2 -0.8155315288451782 0.2521958780641828 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-3|NPC1L1'] 96884 7517 SATLMPVP True PC9_epitope_Rep3 814.4258758418999 814.42476993586 33.916 2 -0.8155377379202687 0.2521958780641828 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 46533 7940 ISYSPLQSDE True H1975_Epitope_Rep1 1137.51898384925 1137.51788993586 35.49 2 -0.8155517276095093 0.2521958780641828 1.0 ['ENSG00000198924|ENST00000361384|DCLRE1A', 'DCLRE1A|p.L656Hfs*4|1|0.3|ENSG00000198924|chr10:113849131-113849138|ATTAATAA/-|frameshift_variant'] 55730 7621 LALPDAKQRPF True PC9_epitope_Rep4 1254.70845638478 1254.70681490379 36.695 3 -0.8156223572994223 0.252256777508288 1.0 ['ENST00000359297.6_1_1:36806079-36806220:-|nuORF'] 29159 19825 FTQDSNYLL True PC9_epitope_Rep2 1099.51858992643 1099.51807496793 81.646 1 -0.8156446915741292 0.252256777508288 1.0 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 64910 16524 LQEDVKKAELH True PC9_epitope_Rep4 1308.70376492716 1308.70266993586 71.532 2 -0.8156527223940562 0.252256777508288 1.0 ['ENSG00000152240|ENST00000282058|HAUS1', 'nc|ENSG00000152240|Q96CS2-2|HAUS1'] 122277 8533 VGATLKLLKI True NCI_RA007_Epitope_Rep4 1054.7114165069 1054.71030993586 39.615 2 -0.8156848370264737 0.2522818599311137 1.0 ['ENSG00000164219|ENST00000419445|PGGT1B', 'ENST00000398621.3_1_10:81652047-81652404:-|nuORF', 'ENST00000455321.1_1_10:52486845-52487529:-|nuORF'] 93959 17114 RRHSEWVP True H1975_Epitope_Rep2 1065.54681079329 1065.54570993586 71.104 2 -0.8157797755640614 0.25229956806864984 1.0 ['ENST00000588005.5_1_17:74569291-74570473:-|nuORF'] 30947 9096 GARPGPGVWDP True NCI_RA007_Epitope_Rep4 1107.5461420869499 1107.54504993586 41.823 2 -0.8158087081631578 0.25229956806864984 1.0 ['nc|ENSG00000247077|Q96HS1-2|PGAM5', 'ENSG00000247077|ENST00000498926|PGAM5'] 80276 13721 PGEDPPVS True PC9_epitope_Rep6 796.36029837988 796.35920993586 64.566 2 -0.8158468677846734 0.25229956806864984 1.0 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 63003 13675 LLPQEHVYDK True PC9_epitope_Rep2 1240.6451874218799 1240.6435349037902 57.891 3 -0.8158796174230436 0.25229956806864984 1.0 ['nc|ENSG00000163093|Q8N3I7-2|BBS5', 'ENSG00000163093|ENST00000295240|BBS5'] 37603 4723 GVVREATRDL True PC9_epitope_Rep4 1114.6094706195 1114.60836993586 24.714 2 -0.8158896640460094 0.25229956806864984 1.0 ['FAM181B|p.D58V|1|0.2|ENSG00000182103|chr11:82733557-82733557|T/A|missense_variant'] 70571 19294 LWERRPSRGLS True PC9_epitope_Rep3 1355.7422161245497 1355.74110993586 79.436 2 -0.8158970766227047 0.25229956806864984 1.0 ['ENST00000527483.5_1_10:127395624-127396187:-|nuORF'] 85293 6533 QEQRQCLRR True NCI_RA007_Epitope_Rep1 1215.6254721201499 1215.6243699358602 29.426 2 -0.8159023341506247 0.25229956806864984 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 7028 6858 AQPNVDKL True PC9_epitope_Rep4 883.4763311916299 883.4752299358599 33.598 2 -0.8159559605103738 0.25231740565360883 1.0 ['nc|ENSG00000105953|Q02218-2|OGDH', 'ENSG00000105953|ENST00000222673|OGDH', 'nc|ENSG00000105953|Q02218-3|OGDH', 'OGDH|p.H691Mfs*13|1|0.17|ENSG00000105953|chr7:44697388-44697388|C/-|frameshift_variant'] 122331 8401 VGCVCWARP True PC9_epitope_Rep3 989.4575274066898 989.45642993586 37.28 2 -0.8159599965407853 0.25231740565360883 1.0 ['ENST00000605589.1_1_1:184355274-184355667:-|nuORF'] 140960 10454 YSFENIQR True PC9_epitope_Rep4 1055.50360856863 1055.5025099358602 47.921 2 -0.8159639751063269 0.25231740565360883 1.0 ['nc|ENSG00000214216|Q1A5X6-3|IQCJ', 'nc|ENSG00000283154|B3KU38-2|IQCJ-SCHIP1'] 107085 12119 SVHKFFNLLKE True PC9_epitope_Rep5 1360.7503211967598 1360.74868490379 51.604 3 -0.8159993322190766 0.25235683230259287 1.0 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF'] 131691 19022 VTNEYLLQQLN True PC9_epitope_Rep3 1333.6877805098497 1333.6866899358602 78.389 2 -0.8160210390917322 0.25236742424242425 1.0 ['ENSG00000159708|ENST00000329956|LRRC36', 'nc|ENSG00000159708|Q1X8D7-3|LRRC36', 'nc|ENSG00000159708|Q1X8D7-2|LRRC36'] 131918 18314 VTRRLGAG True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 77.245 2 -0.8160866124049135 0.25236742424242425 1.0 ['ENST00000491126.6_1_2:165561593-165698829:-|nuORF', 'ENST00000402676.6_1_6:151561150-151561765:+|nuORF', 'ENST00000434366.5_1_2:165561593-165697754:-|nuORF', 'ENST00000483743.5_1_2:165600108-165698476:-|nuORF', 'ENST00000496396.1_1_2:165600108-165698346:-|nuORF', 'nc|ENSG00000082438|Q53SF7-2|COBLL1'] 140613 17855 YRRLREKP True H1975_Epitope_Rep2 1116.651610215 1116.65050993586 74.0 2 -0.8161292399371908 0.25236742424242425 1.0 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000342222.6_1_8:42151073-42188494:+|nuORF'] 42928 10173 IERYKKDL True PC9_epitope_Rep1 1063.6025943339098 1063.6014899358602 44.007 2 -0.81615553411255 0.25236742424242425 1.0 ['nc|ENSG00000160404|Q8N2E6|TOR2A', 'nc|ENSG00000160404|Q5JU69-2|TOR2A', 'ENSG00000160404|ENST00000373284|TOR2A'] 9448 14650 AVVFRWRHRQK True NCI_RA007_Epitope_Rep1 1481.8480186057698 1481.84692993586 61.039 2 -0.8161611408056458 0.25236742424242425 1.0 ['ULK2|p.G26W|1|0.48|ENSG00000083290|chr17:19867342-19867342|C/A|missense_variant'] 138072 14578 YGETWHKGGIL True PC9_epitope_Rep3 1259.6298717109098 1259.6287699358602 61.201 2 -0.8161795348251081 0.2523852566033946 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 75815 22826 NLNQQYQKVKA True PC9_epitope_Rep4 1332.7149983172 1332.71335490379 96.024 3 -0.8162038815045561 0.2523852566033946 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 138806 16646 YIWFIIFFIQP True PC9_epitope_Rep1 1485.8060451677297 1485.80440490379 68.857 3 -0.8162205230761223 0.2523852566033946 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 59073 5458 LEWIRKHHPYD True PC9_epitope_Rep1 1492.75753183552 1492.75588490379 25.828 3 -0.8162815806158563 0.25241032998565277 1.0 ['UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion', 'ENSG00000197299|ENST00000355112|BLM', 'BLM|p.V1088Lfs*11|1|0.2|ENSG00000197299|chr15:90798237-90798238|-/TT|frameshift_variant', 'RCCD1-BLM|2|fusion'] 1525 7217 AEENLKSCLS True H1975_Epitope_Rep1 1092.5121246469998 1092.51102993586 32.771 2 -0.816327683971291 0.25246409664136815 1.0 ['nc|ENSG00000214694|A8MVX0|ARHGEF33', 'ENSG00000214694|ENST00000409978|ARHGEF33'] 138813 18542 YIWVKGRWKWK True PC9_epitope_Rep4 1548.87177374212 1548.8701349037901 79.396 3 -0.8163985422308495 0.25247119923102307 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 73739 4895 NAAPGVHL True NCI_RA007_Epitope_Rep5 777.4133370122499 777.41222993586 25.52 2 -0.8164269108045817 0.25247119923102307 1.0 ['KRT25|p.D247H|1|0.19|ENSG00000204897|chr17:40751257-40751257|C/G|missense_variant'] 83830 19876 PVLQEDHCDS True PC9_epitope_Rep4 1141.47098811101 1141.46988993586 84.585 2 -0.8165030540179504 0.25248902533497836 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 79717 17434 PDVLWAFL True PC9_epitope_Rep4 959.5116540711899 959.51054993586 75.054 2 -0.8165279655331164 0.25248902533497836 1.0 ['ENST00000416379.6_2_7:98445757-98445799:-|nuORF'] 59678 20091 LGALVSVLSI True PC9_epitope_Rep1 970.60628273202 970.60518993586 82.108 2 -0.8165608842931817 0.25248902533497836 1.0 ['nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 85762 6765 QHDKLNLGPAI True NCI_RA007_Epitope_Rep5 1204.6564208119198 1204.6553299358602 32.698 2 -0.8165778499497492 0.25249612669994836 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 122619 13293 VGFSAPSQLL True PC9_epitope_Rep2 1017.54949613189 1017.54838993586 56.409 2 -0.8165818544933755 0.25249612669994836 1.0 ['ENST00000261177.9_1_12:31145010-31145274:+|nuORF'] 103516 4715 SPRKDDAKKAK True NCI_RA007_Epitope_Rep1 1242.7044336335 1242.7027949037902 22.422 3 -0.8166787514311207 0.25254988595446787 1.0 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP'] 131743 19256 VTPLVELQ True PC9_epitope_Rep5 897.5171333744499 897.51602993586 79.109 2 -0.8167737157231814 0.25258929852245016 1.0 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 133254 22974 VVTLILLLLL True NCI_RA007_Epitope_Rep1 1108.783518818 1108.7824299358601 94.362 2 -0.8167840047649557 0.2525963966031673 1.0 ['nc|ENSG00000122223|Q9BZW8-4|CD244', 'nc|ENSG00000122223|Q9BZW8-3|CD244', 'ENSG00000122223|ENST00000368034|CD244', 'nc|ENSG00000122223|Q9BZW8|CD244'] 63353 19577 LLTQELLQG True PC9_epitope_Rep6 1013.57571087973 1013.5746099358599 87.967 2 -0.8167963315498117 0.2525963966031673 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 124853 6679 VHKVIHTGEK True NCI_RA007_Epitope_Rep4 1146.65094150866 1146.6493049037902 32.313 3 -0.8168195183874267 0.2526034942766159 1.0 ['ENSG00000196350|ENST00000601693|ZNF729'] 22181 5151 ESTVPESVTPV True NCI_RA007_Epitope_Rep5 1143.56593404167 1143.5648299358602 26.508 2 -0.816839342793661 0.2526034942766159 1.0 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 95208 26144 RVKKGGGKK True PC9_epitope_Rep5 956.6243328379998 956.6237849679301 106.25 1 -0.8169781784337782 0.2526426000028685 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 33795 20661 GLLHFFFL True PC9_epitope_Rep4 992.5483739330799 992.54726993586 87.631 2 -0.8169845566615644 0.2526426000028685 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'ADGRL2|p.K951Nfs*54|1|0.08|ENSG00000117114|chr1:81970440-81970440|A/-|frameshift_variant', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 72017 2750 METDLEVRLR True H1975_Epitope_Rep2 1260.6496211793199 1260.64798490379 14.606 3 -0.8170002892070494 0.2526426000028685 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 49633 14256 KGGILCEE True PC9_epitope_Rep1 847.4109540537501 847.40984993586 59.66 2 -0.8170046014606355 0.2526426000028685 1.0 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.P1892Lfs*5|1|0.23|ENSG00000104237|chr8:54629556-54629556|C/-|frameshift_variant', 'RP1|p.T860Lfs*5|1|0.15|ENSG00000104237|chr8:54626458-54626459|-/ACTTTTGCAA|frameshift_variant'] 32630 6711 GGLFPPPV True H1975_Epitope_Rep3 782.4326754744999 782.43156993586 30.769 2 -0.8170413927068032 0.2526426000028685 1.0 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 68608 13563 LTHRSFVSEF True PC9_epitope_Rep1 1221.61422164677 1221.61258490379 57.026 3 -0.817060801221961 0.2526426000028685 1.0 ['nc|ENSG00000188089|Q3MJ16|PLA2G4E', 'ENSG00000188089|ENST00000696112|PLA2G4E', 'nc|ENSG00000188089|Q3MJ16-2|PLA2G4E'] 95589 9521 RWWFRRLFLIF True H1975_Epitope_Rep2 1638.9299573245796 1638.9283049037901 41.594 3 -0.8170627568137121 0.2526426000028685 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 100717 12730 SLDRVESV True PC9_epitope_Rep5 903.4661604307499 903.46506993586 53.973 2 -0.8170688051974633 0.2526426000028685 1.0 ['ENSG00000149428|ENST00000617285|HYOU1', 'nc|ENSG00000149428|Q9Y4L1-2|HYOU1', 'ENST00000543287.5_1_11:118919950-118926831:-|nuORF'] 138094 6559 YGGLRGAI True PC9_epitope_Rep2 805.4446371405298 805.44354993586 30.641 2 -0.8170905145930514 0.2526426000028685 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 135056 22331 WDYRERRKFFP True PC9_epitope_Rep1 1598.8106300375393 1598.8095299358602 90.71 2 -0.8171220847923597 0.2526533187998394 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 16892 12248 EFLFHLHM True NCI_RA007_Epitope_Rep4 1072.5164221818 1072.51532993586 54.11 2 -0.817182224791169 0.25267837934743637 1.0 ['ENST00000531716.1_1_11:73996688-73997284:-|nuORF'] 98891 6960 SGVTITEL True PC9_epitope_Rep6 818.43854870058 818.43744993586 35.722 2 -0.817239629131414 0.25268547334604957 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.K1083Qfs*87|1|0.22|ENSG00000116147|chr1:175355505-175355506|-/G|frameshift_variant', 'TNR|p.R569Dfs*85|1|0.22|ENSG00000116147|chr1:175386104-175386104|G/-|frameshift_variant', 'TNR|p.P387Q|1|0.31|ENSG00000116147|chr1:175396624-175396624|G/T|missense_variant'] 100904 10049 SLEWLDLDGD True H1975_Epitope_Rep1 1161.51898384925 1161.51788993586 43.593 2 -0.817259130846933 0.25268547334604957 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 81576 19674 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 82.406 3 -0.8173086081609532 0.252710532354291 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 110173 3534 TEPQDRVPP True H1975_Epitope_Rep2 1037.5141732523298 1037.5130699358601 18.464 2 -0.8173324720225715 0.25272124940842405 1.0 ['nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 73866 14138 NARVMLETQE True PC9_epitope_Rep5 1189.57612188589 1189.57447490379 59.393 3 -0.8174046521902748 0.2527283417705181 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3'] 83771 23189 PVITCDFYL True PC9_epitope_Rep1 1069.5154191222898 1069.5143299358601 93.991 2 -0.8174066247710573 0.2527283417705181 1.0 ['ENST00000412729.1_22:16419404-16436476:-|nuORF'] 113211 14088 TLQKEGVI True PC9_epitope_Rep2 886.5123823471798 886.51128993586 59.463 2 -0.8174251813892514 0.2527354337257826 1.0 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 37824 17009 GYHLFCALL True PC9_epitope_Rep2 1035.5211732090697 1035.5200699358602 70.677 2 -0.8174307264984019 0.2527354337257826 1.0 ['nc|ENSG00000160781|Q6TCH4-3|PAQR6', 'nc|ENSG00000160781|Q6TCH4-4|PAQR6', 'nc|ENSG00000160781|Q6TCH4-5|PAQR6', 'ENSG00000160781|ENST00000292291|PAQR6', 'nc|ENSG00000160781|Q6TCH4-2|PAQR6'] 56517 21104 LDFQKQPVP True PC9_epitope_Rep1 1070.5760452329 1070.57494993586 86.004 2 -0.8174550240459376 0.2527389009980498 1.0 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'ENST00000560232.6_1_1:167301714-167356435:+|nuORF', 'ENST00000470928.3_1_1:167334720-167353117:+|nuORF'] 29448 9075 FVEGLFCTY True H1975_Epitope_Rep3 1077.48411899401 1077.48302993586 39.892 2 -0.8174599640543324 0.2527389009980498 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|206|1|anti-sense'] 44026 8601 IIIKMEPEDIP True NCI_RA007_Epitope_Rep1 1296.69992541668 1296.6988299358602 37.457 2 -0.8174741840550996 0.2527389009980498 1.0 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 120454 11539 VEEREPEN True H1975_Epitope_Rep3 1000.4461532621599 1000.44504993586 49.51 2 -0.8175307558512768 0.2527782955963119 1.0 ['ENSG00000184361|ENST00000331780|SPATA32'] 114486 8568 TPYKQEINAK True H1975_Epitope_Rep1 1190.6295373577398 1190.62844993586 37.884 2 -0.8175650094229068 0.25278837055939446 1.0 ['ENSG00000138356|ENST00000374700|AOX1'] 63114 15413 LLRDGETL True PC9_epitope_Rep4 915.50254593947 915.50144993586 67.218 2 -0.8175881030492789 0.25278837055939446 1.0 ['nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'PLS3-CCDC64|1|fusion', 'PLS3-CCDC64|2|fusion'] 62254 15645 LLFHRRRHQSP True H1975_Epitope_Rep3 1445.81163309705 1445.8105299358601 65.596 2 -0.8175922674102534 0.25278837055939446 1.0 ['LCE2D|p.R79L|1|0.29|ENSG00000187223|chr1:152664341-152664341|G/T|missense_variant'] 124339 12102 VGTSKVLVL True NCI_RA007_Epitope_Rep3 914.5800679841799 914.57896993586 54.721 2 -0.8175949616150028 0.25278837055939446 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 64286 20395 LPIVRTWRLN True H1975_Epitope_Rep1 1266.75607528354 1266.75442490379 84.82 3 -0.817601828353449 0.25278837055939446 1.0 ['ENST00000402426.2_1_6:73765044-73765512:+|nuORF'] 115875 13892 TSELLKGIP True PC9_epitope_Rep5 956.5542471591599 956.55314993586 58.455 2 -0.8176187034630938 0.25278837055939446 1.0 ['ENST00000592485.1_1_19:10229758-10229860:-|nuORF', 'ENST00000587681.5_1_19:10229095-10230535:-|nuORF', 'ENSG00000130811|ENST00000253108|EIF3G'] 123834 18643 VGRNSQGR True PC9_epitope_Rep3 872.45766143572 872.45656993586 76.929 2 -0.8176518638775634 0.25278837055939446 1.0 ['ENST00000336798.11_2_1:31350222-31350498:-|nuORF'] 80543 8457 PGPLSKQGS True PC9_epitope_Rep1 869.46068112749 869.46013496793 37.366 1 -0.8176630972294929 0.25278837055939446 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 64575 14546 LPSKDVKP True PC9_epitope_Rep1 882.5174677276199 882.51636993586 60.776 2 -0.8176746270351397 0.25278837055939446 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 113398 11623 TLSDEEEFQI True PC9_epitope_Rep3 1209.5401132166498 1209.5384549037901 49.724 3 -0.8177024917209329 0.25278837055939446 1.0 ['UTRN|p.E389Q|1|0.07|ENSG00000152818|chr6:144437670-144437670|G/C|missense_variant'] 111288 6681 THLYCEPPA True PC9_epitope_Rep5 1029.45896687533 1029.4578699358601 30.67 2 -0.8177171777421074 0.25278837055939446 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P1343Lfs*68|1|0.26|ENSG00000198753|chrX:153774974-153774974|C/-|frameshift_variant'] 32537 26276 GGGGGCCCG True H1975_Epitope_Rep2 669.16690136125 669.16635496793 108.08 1 -0.8177209805686659 0.25278837055939446 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 51025 2200 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 11.387 3 -0.8177597040643121 0.25278837055939446 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 109952 20171 TEGVKTFSF True PC9_epitope_Rep2 1014.5022115863 1014.50110993586 83.0 2 -0.8177650355920236 0.25278837055939446 1.0 ['ENSG00000122145|ENST00000373296|TBX22', 'nc|ENSG00000122145|Q9Y458-2|TBX22', 'TBX22|p.P299Hfs*27|1|0.39|ENSG00000122145|chrX:80028021-80028021|C/-|frameshift_variant'] 117133 18694 TVKNIQGKVP True PC9_epitope_Rep6 1082.64479349906 1082.64368993586 84.549 2 -0.8177730454059714 0.25278837055939446 1.0 ['nc|ENSG00000157429|P17023-2|ZNF19', 'ENSG00000157429|ENST00000288177|ZNF19'] 92390 10836 RLPTPEQI True PC9_epitope_Rep1 952.5341804209199 952.53308993586 46.568 2 -0.8178108534345148 0.25278837055939446 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 119212 25722 VAKRTLGG True PC9_epitope_Rep1 800.4868363056798 800.48628496793 103.98 1 -0.8178176887225913 0.25278837055939446 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 84711 9872 QDNENVVNEY True H1975_Epitope_Rep3 1222.5102100707 1222.5096749679299 43.001 1 -0.8178638051173535 0.25279545845518664 1.0 ['CON__P02676'] 65476 20398 LRKTRLDAPR True NCI_RA007_Epitope_Rep4 1224.74148784856 1224.74038993586 88.322 2 -0.8178670436452712 0.25279545845518664 1.0 ['nc|ENSG00000091542|Q6P6C2-3|ALKBH5', 'ENSG00000091542|ENST00000399138|ALKBH5', 'nc|ENSG00000091542|Q6P6C2-1|ALKBH5'] 65280 8549 LQVNKVMSILF True NCI_RA007_Epitope_Rep2 1290.73697963174 1290.73588993586 37.897 2 -0.8178913123860453 0.2528061699901085 1.0 ['NTF3|p.L112Wfs*48|1|0.17|ENSG00000185652|chr12:5494543-5494543|C/-|frameshift_variant', 'ENSG00000185652|ENST00000423158|NTF3'] 127538 11936 VNQLPADFRIL True NCI_RA007_Epitope_Rep1 1284.7190210684798 1284.7179299358602 50.414 2 -0.8179050415939321 0.25281688121792484 1.0 ['ENST00000342745.4_1_14:70078473-70125325:+|nuORF'] 42967 8642 IESPQVETE True H1975_Epitope_Rep2 1030.4818700645399 1030.48076993586 38.2 2 -0.817915651451829 0.25282396788990824 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 142834 17371 YYSQDDNC True H1975_Epitope_Rep1 1006.3338259318599 1006.33327496793 72.286 1 -0.8179304550178186 0.25282396788990824 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608566.1_1_1:172502539-172520775:+|nuORF'] 34963 21591 GQRLPVEDFSL True PC9_epitope_Rep4 1259.6510010783097 1259.64990993586 91.233 2 -0.8179427759633061 0.25283105415555746 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 60578 15358 LHGLASLL True PC9_epitope_Rep3 822.4963383602201 822.49524993586 64.231 2 -0.8179431761032788 0.25283105415555746 1.0 ['ENSG00000183134|ENST00000332539|PTGDR2'] 75650 22221 NLFFAGTETVS True NCI_RA007_Epitope_Rep5 1184.57135377528 1184.5702499358601 92.62 2 -0.8179849330518696 0.25284176425899113 1.0 ['ENSG00000197838|ENST00000330436|CYP2A13'] 131506 4968 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 24.144 2 -0.817991933919187 0.252845225467993 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 16208 5950 EEEGMSYLY True H1975_Epitope_Rep2 1119.44304202767 1119.44194993586 27.87 2 -0.8179961808135277 0.252845225467993 1.0 ['ENSG00000182459|ENST00000333437|TEX19'] 132436 25441 VVAVAGTIIL True PC9_epitope_Rep5 954.61136811246 954.6108149679301 103.09 1 -0.8180067267519175 0.252845225467993 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 8603 17291 ATWTMATL True PC9_epitope_Rep4 893.4316894983299 893.43058993586 74.513 2 -0.8180495282621024 0.25285593475425344 1.0 ['nc|ENSG00000188089|Q3MJ16|PLA2G4E', 'ENSG00000188089|ENST00000696112|PLA2G4E', 'nc|ENSG00000188089|Q3MJ16-2|PLA2G4E'] 113828 11238 TNFCFWKNLYR True NCI_RA007_Epitope_Rep2 1490.7128901422197 1490.71178993586 48.298 2 -0.8181104717513564 0.25287372796330804 1.0 ['ENST00000366744.5_1_1:228296168-228296940:-|nuORF'] 84661 9780 QDHIWIRFHSD True H1975_Epitope_Rep1 1452.6898461985202 1452.6887499358602 42.547 2 -0.8181138512782713 0.25287372796330804 1.0 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'LRP12|p.D244*|1|0.14|ENSG00000147650|chr8:104497822-104497823|-/A|frameshift_variant'] 65970 17225 LSDVQKLNL True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 71.517 2 -0.8181227627014 0.25287372796330804 1.0 ['LRRC30|p.E72D|1|0.14|ENSG00000206422|chr18:7231354-7231354|G/C|missense_variant'] 3151 24279 AGDHSYCLLC True H1975_Epitope_Rep3 1080.4368515317599 1080.43574993586 101.13 2 -0.8181442681391279 0.25288081178696326 1.0 ['ENST00000222345.10_1_19:38571927-38572134:+|nuORF'] 55580 10756 LAHFGIDMLHM True H1975_Epitope_Rep1 1283.61548460007 1283.6143899358601 46.334 2 -0.8181650376552424 0.25288081178696326 1.0 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13'] 19964 10877 ELVTQRKQD True NCI_RA007_Epitope_Rep2 1115.5934862021898 1115.5923899358602 46.916 2 -0.8182436673589565 0.25288789520451743 1.0 ['nc|ENSG00000105289|O95049-5|TJP3', 'ENSG00000105289|ENST00000541714|TJP3', 'nc|ENSG00000105289|O95049-4|TJP3', 'nc|ENSG00000105289|O95049-3|TJP3'] 92612 6647 RMWKRQQQKWE True H1975_Epitope_Rep1 1602.8201491754196 1602.8190499358602 30.622 2 -0.8182681440670498 0.25288789520451743 1.0 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23'] 88298 5379 QSEREQEI True PC9_epitope_Rep6 1017.4727023631698 1017.47160993586 28.564 2 -0.8182964795607586 0.2528986026513794 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2'] 88390 8101 QSLHLQKNQLR True NCI_RA007_Epitope_Rep1 1363.76843087239 1363.76677490379 35.51 3 -0.8183462658650329 0.2529343479943248 1.0 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 79438 20987 PAVADLLLQ True PC9_epitope_Rep5 938.54368247546 938.54258993586 85.788 2 -0.8183540102308909 0.2529343479943248 1.0 ['ENSG00000204347|ENST00000375366|BTBD17'] 69438 14495 LTYLQLKER True PC9_epitope_Rep5 1162.6710082468999 1162.66936490379 60.755 3 -0.8183804620233766 0.25294505431511366 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 44454 13755 ILKDSDLLDRR True H1975_Epitope_Rep3 1342.75686312918 1342.7557699358601 58.208 2 -0.8184545972250892 0.2529735461866957 1.0 ['nc|ENSG00000147481|Q9NSN8-2|SNTG1', 'SNTG1|p.S448Rfs*40|1|0.25|ENSG00000147481|chr8:50752060-50752060|C/-|frameshift_variant', 'ENSG00000147481|ENST00000642720|SNTG1'] 103215 9539 SPKPRRRRRHW True PC9_epitope_Rep3 1530.88686372598 1530.88465987172 41.638 4 -0.818459168396394 0.2529735461866957 1.0 ['ENST00000344686.6_1_17:43367939-43368083:-|nuORF'] 14299 20630 DSVLVAKTKYL True H1975_Epitope_Rep2 1235.71253870571 1235.7114499358602 85.449 2 -0.8184634134526685 0.2529735461866957 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 17110 9635 EGLTDVIRDVP True H1975_Epitope_Rep3 1212.6350166609998 1212.6339099358602 42.077 2 -0.8184770857810628 0.2529735461866957 1.0 ['ENSG00000155034|ENST00000382368|FBXL18'] 115926 15395 TSGKKGGK True NCI_RA007_Epitope_Rep1 761.4395517600899 761.43844993586 63.961 2 -0.8185337810281783 0.2529842511786538 1.0 ['ENSG00000099284|ENST00000373255|MACROH2A2'] 119213 25802 VAKRTLGG True PC9_epitope_Rep1 800.4868363056798 800.48628496793 104.32 1 -0.818615632210622 0.25303431969620976 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 131449 8948 VTISLATL True PC9_epitope_Rep2 816.49566965388 816.49456993586 39.775 2 -0.818627961476519 0.25303431969620976 1.0 ['nc|ENSG00000165186|Q96NR3-2|PTCHD1', 'ENSG00000165186|ENST00000379361|PTCHD1', 'PTCHD1|p.V718Wfs*5|1|0.47|ENSG00000165186|chrX:23393669-23393669|G/-|frameshift_variant', 'nc|ENSG00000165186|Q96NR3-3|PTCHD1'] 970 10865 ADTQEEKNRIE True PC9_epitope_Rep1 1331.63172218571 1331.63062993586 46.679 2 -0.8186668205006794 0.2530413973949303 1.0 ['NPEPPS|p.M772T|1|0.16|ENSG00000141279|chr17:47618369-47618369|T/C|missense_variant'] 142866 17373 YYTISQRA True H1975_Epitope_Rep3 1000.4977949121998 1000.49727496793 72.485 1 -0.8186713871000674 0.2530413973949303 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 20657 7913 EQAKAQLAV True H1975_Epitope_Rep2 956.5290950404799 956.52798993586 35.385 2 -0.8186802746641796 0.25304812527759074 1.0 ['ENSG00000165494|ENST00000690938|PCF11', 'nc|ENSG00000165494|O94913|PCF11', 'PCF11|p.F534Yfs*5|1|0.16|ENSG00000165494|chr11:83166497-83166498|TT/-|frameshift_variant'] 4887 17785 ALETERAKAI True PC9_epitope_Rep3 1100.61897267404 1100.6178699358602 73.612 2 -0.8186824665696756 0.25304812527759074 1.0 ['MYT1L|p.M448I|1|0.11|ENSG00000186487|chr2:1922425-1922425|C/T|missense_variant'] 80451 20818 PGKRRAAG True PC9_epitope_Rep6 811.4776686043098 811.47656993586 92.849 2 -0.8187112515607218 0.25304812527759074 1.0 ['ENST00000312037.5_1_5:149829107-149829164:-|nuORF'] 65680 4789 LSAQPVQTK True NCI_RA007_Epitope_Rep5 970.54474510462 970.54364993586 25.106 2 -0.8187243841967881 0.25304812527759074 1.0 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'ENST00000462916.1_1_15:30024631-30025027:-|nuORF'] 17201 17362 EGTLSVEKL True PC9_epitope_Rep3 974.52842633414 974.5273299358599 71.954 2 -0.8187370486393466 0.25304812527759074 1.0 ['ENSG00000261150|ENST00000615648|EPPK1', 'EPPK1|p.H773Tfs*49|1|0.43|ENSG00000261150|chr8:143870938-143870938|C/-|frameshift_variant'] 13047 9970 DLPALPRRR True H1975_Epitope_Rep1 1092.6516102150001 1092.65050993586 43.286 2 -0.8187618314442681 0.25304812527759074 1.0 ['ENST00000294484.6_2_1:11577566-11579522:+|nuORF'] 65971 16513 LSDVQKLNL True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 71.49 2 -0.8187698574352569 0.25304812527759074 1.0 ['LRRC30|p.E72D|1|0.14|ENSG00000206422|chr18:7231354-7231354|G/C|missense_variant'] 132435 25485 VVAVAGTIIL True PC9_epitope_Rep2 954.61136811246 954.61026993586 103.71 2 -0.8187781054492808 0.25304812527759074 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 75481 23436 NKKKKEKE True PC9_epitope_Rep4 1030.6134933707797 1030.6123899358602 98.435 2 -0.8187829032681715 0.25304812527759074 1.0 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.C931F|1|0.21|ENSG00000125676|chrX:123626628-123626628|C/A|missense_variant'] 22919 9770 EVEEDEYKAFY True PC9_epitope_Rep1 1420.6034417491996 1420.60234993586 42.441 2 -0.8187937721575677 0.25304812527759074 1.0 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 116948 13573 TVGDWKNHF True PC9_epitope_Rep5 1102.5195929859399 1102.51848993586 57.232 2 -0.8188066092649355 0.2530552013639164 1.0 ['ENSG00000198203|ENST00000251481|SULT1C2', 'nc|ENSG00000198203|O00338-2|SULT1C2'] 100930 13549 SLFFNWKQEFR True H1975_Epitope_Rep1 1500.75138382592 1500.75028993586 57.24 2 -0.8188076546435217 0.2530552013639164 1.0 ['ENSG00000091106|ENST00000402280|NLRC4'] 131507 5063 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 24.501 2 -0.818829774581619 0.25308730408870805 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 73173 10330 MRVPHFLQ True PC9_epitope_Rep2 1026.54330563598 1026.54220993586 45.062 2 -0.8188404419985246 0.25308730408870805 1.0 ['nc|ENSG00000164542|Q8NCT3|MATCAP2', 'nc|ENSG00000164542|Q8NCT3-5|MATCAP2', 'nc|ENSG00000164542|Q8NCT3-3|MATCAP2', 'nc|ENSG00000164542|Q8NCT3-2|MATCAP2', 'ENSG00000164542|ENST00000440378|MATCAP2'] 16632 13050 EEQERQELF True NCI_RA007_Epitope_Rep4 1206.55168095986 1206.5505899358602 57.298 2 -0.8188513660869782 0.25308730408870805 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 83626 16180 PVDNLVIK True PC9_epitope_Rep3 896.53311779176 896.53202993586 67.374 2 -0.818898459984453 0.25309800438376573 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697G|1|0.2|ENSG00000104133|chr15:44585667-44585667|T/C|missense_variant'] 13576 11765 DPEEEEPVYI True PC9_epitope_Rep4 1218.5292141797797 1218.5281099358601 53.02 2 -0.8189641966608985 0.25312303019884247 1.0 ['nc|ENSG00000144460|Q9P242|NYAP2', 'ENSG00000144460|ENST00000272907|NYAP2'] 16032 8670 EDTVLPQKED True H1975_Epitope_Rep1 1172.5560976339598 1172.5550099358602 38.278 2 -0.8190131092312414 0.25314442884565796 1.0 ['ENST00000559471.5_1_15:49311667-49311748:-|nuORF'] 3952 13389 AHDHSMDIP True PC9_epitope_Rep6 1021.42872937621 1021.42762993586 63.171 2 -0.8190208821268773 0.25314442884565796 1.0 ['MDM4|p.Q124H|1|0.18|ENSG00000198625|chr1:204537458-204537458|G/C|missense_variant'] 56384 12284 LDDSALYLSDK True PC9_epitope_Rep6 1238.60304782638 1238.6019499358601 58.636 2 -0.8191094063092982 0.2531551277092555 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 112667 7229 TLFRYVRHYSY True NCI_RA007_Epitope_Rep1 1503.76228286279 1503.76063490379 32.109 3 -0.8193003147294122 0.2531801512720605 1.0 ['ENST00000505732.5_1_9:15186859-15307321:-|nuORF'] 140123 4577 YQQHLWKSWDP True NCI_RA007_Epitope_Rep2 1486.6993482530597 1486.69771490379 22.43 3 -0.8193282191450918 0.2531872224609655 1.0 ['ENST00000503280.5_1_4:9800851-9909967:-|nuORF'] 59091 2681 LEWTSRWNDLR True PC9_epitope_Rep3 1474.7317110104998 1474.73005490379 14.788 3 -0.8193891378807556 0.2531872224609655 1.0 ['ENST00000481501.1_1_17:27042472-27042902:-|nuORF'] 42659 16946 IEHRKELRP True H1975_Epitope_Rep2 1176.6727395823998 1176.6716499358602 70.427 2 -0.8194086447300857 0.2532122444886909 1.0 ['RGS22|p.G1112R|1|0.09|ENSG00000132554|chr8:99981963-99981963|C/T|missense_variant'] 117546 14312 TVSFHLWI True PC9_epitope_Rep3 1001.5334521449299 1001.53234993586 60.138 2 -0.8194694061675242 0.2532229416146221 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENST00000474593.1_1_6:73985278-74020035:-|nuORF'] 22042 8966 ESLIAVFQKY True H1975_Epitope_Rep1 1196.6441247927198 1196.64302993586 39.392 2 -0.8195127070324284 0.2532622863936516 1.0 ['ENST00000478109.1_1_1:152005140-152020324:-|nuORF', 'ENSG00000163191|ENST00000271638|S100A11'] 121499 5525 VEYRLVQS True NCI_RA007_Epitope_Rep4 992.5290950404799 992.52798993586 27.848 2 -0.8195597408229335 0.25328005041824225 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 140723 3477 YSCMLGKK True NCI_RA007_Epitope_Rep4 928.4510450439199 928.44994993586 19.32 2 -0.8196170490900055 0.25328005041824225 1.0 ['ENSG00000127804|ENST00000263092|METTL16', 'ENST00000574752.5_1_17:2340122-2367575:-|nuORF'] 55938 4401 LARHGSAI True PC9_epitope_Rep4 823.46643521427 823.46532993586 23.375 2 -0.8196255717469638 0.25328005041824225 1.0 ['PLEKHG3|p.T658I|1|0.29|ENSG00000126822|chr14:64741490-64741490|C/T|missense_variant'] 94426 25187 RRRRRALR True PC9_epitope_Rep5 1138.7384085871397 1138.7373099358601 102.03 2 -0.8196711326596166 0.253301440889169 1.0 ['ENST00000291295.13_1_19:47104533-47109093:+|nuORF'] 946 6612 ADRPTVPP True H1975_Epitope_Rep2 851.4501164437899 851.44900993586 30.341 2 -0.8196735173370314 0.253301440889169 1.0 ['ENST00000428809.5_1_21:15399915-15456441:+|nuORF'] 16685 8692 EERKSHKIP True H1975_Epitope_Rep2 1122.61455599994 1122.6134499358602 38.395 2 -0.8196873629235689 0.2533121356650768 1.0 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'ENST00000587110.1_1_17:41796950-41797316:-|nuORF'] 4112 10246 AHSHSYSH True PC9_epitope_Rep5 924.3838277891202 924.38272993586 44.398 2 -0.8197199296621402 0.25332989602131134 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 42457 16801 IEEATWHQL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 69.871 2 -0.819781753947096 0.25332989602131134 1.0 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 11587 5427 DGEEQQPPHEA True H1975_Epitope_Rep3 1235.50545904343 1235.50436993586 25.934 2 -0.819784461215817 0.25332989602131134 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 60741 18282 LHRLRLRE True NCI_RA007_Epitope_Rep5 1091.66759463231 1091.66648993586 77.125 2 -0.8197999999379529 0.2533512832263978 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENST00000471767.1_1_5:176893910-176894598:-|nuORF'] 60414 13548 LGVASTLPAQC True PC9_epitope_Rep1 1058.5430308524599 1058.54192993586 56.968 2 -0.8198846903965836 0.2533512832263978 1.0 ['ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 99470 8038 SICINDRLREQ True PC9_epitope_Rep1 1345.67723290949 1345.67557490379 35.74 3 -0.8198970966703423 0.25336197636949515 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'ENST00000479369.6_1_1:144864133-144875987:-|nuORF', 'ENST00000494734.1_1_1:144864924-144866670:-|nuORF'] 37425 14963 GVTFLLLP True H1975_Epitope_Rep2 858.5214904788999 858.52038993586 62.706 2 -0.8199411493046748 0.2533690406289831 1.0 ['ENSG00000188124|ENST00000641124|OR2AG2'] 112022 13023 TISAYQEDP True PC9_epitope_Rep1 1022.4556553167 1022.45454993586 54.963 2 -0.8199495039457937 0.2533690406289831 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 112359 10127 TLALAMIYLK True NCI_RA007_Epitope_Rep1 1135.6675030895901 1135.6664099358602 43.403 2 -0.8200209983359119 0.25342269576674115 1.0 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 128078 19104 VPLALVSGL True PC9_epitope_Rep6 867.54295419947 867.54184993586 86.133 2 -0.8200735413540648 0.253433387274628 1.0 ['ENST00000301463.8_1_12:53459285-53459390:-|nuORF'] 124214 15203 VGTENGLM True PC9_epitope_Rep3 819.3796539254699 819.37854993586 63.623 2 -0.8201310692837891 0.2534404490842176 1.0 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000574871.1_1_17:4798302-4798913:+|nuORF', 'nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 87583 23552 QQLLLLGGGG True PC9_epitope_Rep6 954.5498304850598 954.54872993586 103.74 2 -0.8201729789168116 0.2534404490842176 1.0 ['ENSG00000168806|ENST00000305641|LCMT2', 'ENST00000567039.1_1_15:43620629-43622752:-|nuORF'] 132517 6003 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep5 1029.44371111445 1029.4426099358602 28.086 2 -0.820189878720023 0.2534475104893102 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 119215 25960 VAKRTLGG True PC9_epitope_Rep1 800.4868363056798 800.48628496793 105.0 1 -0.8202115191866828 0.2534475104893102 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 118739 18308 TYVTILPEL True NCI_RA007_Epitope_Rep5 1047.58521293427 1047.5841099358602 77.223 2 -0.8202469225600508 0.2534688909572564 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 68832 6634 LTLTWLYFWWE True H1975_Epitope_Rep1 1556.770387935 1556.76874490379 30.573 3 -0.8202478433287862 0.2534688909572564 1.0 ['ENST00000528031.1_1_11:75167699-75188792:-|nuORF', 'ENSG00000158555|ENST00000336898|GDPD5', 'ARRB1-GDPD5|1|fusion'] 77435 4938 NSLYVLENN True NCI_RA007_Epitope_Rep5 1064.51383889916 1064.51274993586 25.694 2 -0.8202855523507334 0.2534938999942723 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 22047 5918 ESLLQRQLDP True H1975_Epitope_Rep3 1197.6353510141698 1197.63424993586 27.772 2 -0.8203823208068787 0.25351527821529823 1.0 ['ENSG00000185038|ENST00000389758|MROH2A'] 53179 6610 KQDKVPHTAQ True NCI_RA007_Epitope_Rep4 1150.6094706195 1150.60836993586 32.054 2 -0.8203901379695332 0.25351527821529823 1.0 ['ST6GALNAC1|p.E111K|1|0.07|ENSG00000070526|chr17:76629512-76629512|C/T|missense_variant'] 25028 16372 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 67.797 2 -0.8204437458371288 0.25352233676975944 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 80779 6925 PHKRSHRHRGK True H1975_Epitope_Rep1 1394.78681533154 1394.78515490379 31.68 3 -0.8204466641879158 0.25352233676975944 1.0 ['ENSG00000140986|ENST00000268661|RPL3L'] 30942 17332 GARKQRRPF True NCI_RA007_Epitope_Rep4 1114.6471935408997 1114.6460899358601 75.058 2 -0.820478809015696 0.25356166148823756 1.0 ['ENST00000573622.1_1_12:9795539-9795680:+|nuORF'] 138443 9673 YHKWRIYYKKR True H1975_Epitope_Rep3 1639.9099501559897 1639.9088499358602 42.226 2 -0.8205267314415097 0.25358303623842043 1.0 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL', 'MLXIPL|p.P412Hfs*61|1|0.5|ENSG00000009950|chr7:73597550-73597550|G/-|frameshift_variant'] 25569 18167 FEKLDDYAS True NCI_RA007_Epitope_Rep1 1086.4869554449797 1086.4858499358602 74.81 2 -0.8205361756271932 0.25358303623842043 1.0 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2', 'nc|ENSG00000109854|Q9BUP3-2|HTATIP2'] 88393 23007 QSLIPFVQL True PC9_epitope_Rep5 1043.60153170475 1043.60097496793 93.487 1 -0.8205715819734377 0.25358646164418863 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 41860 5967 IAYIMLAVEVR True NCI_RA007_Epitope_Rep5 1276.7213295676 1276.71967490379 29.636 3 -0.8205933034335567 0.25358646164418863 1.0 ['nc|ENSG00000177669|Q96T53-2|MBOAT4', 'ENSG00000177669|ENST00000320542|MBOAT4'] 44230 22925 IKKRRRWWF True PC9_epitope_Rep5 1374.8149275723397 1374.8132849037902 93.172 3 -0.8206203890206829 0.25358646164418863 1.0 ['ENST00000229634.13_1_6:126136448-126199430:+|nuORF'] 72533 20122 MLKKQRWVKKN True NCI_RA007_Epitope_Rep3 1457.8653084626897 1457.86366490379 87.689 3 -0.82075329277796 0.25361851995017826 1.0 ['ENST00000368886.9_1_10:124758104-124758158:-|nuORF'] 69858 18532 LVHNGWDDL True PC9_epitope_Rep4 1067.50360856863 1067.5025099358602 79.358 2 -0.8207584828444484 0.25361851995017826 1.0 ['nc|ENSG00000165458|O15357-2|INPPL1', 'ENSG00000165458|ENST00000298229|INPPL1'] 64249 9265 LPHFISPYL True H1975_Epitope_Rep1 1085.59096702105 1085.5898699358602 40.549 2 -0.8207887891016331 0.25361851995017826 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 66409 20657 LSGLNFSLP True PC9_epitope_Rep1 946.5123823471799 946.51128993586 84.278 2 -0.8208078063902766 0.25363989062432896 1.0 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 101973 8365 SLQHPNVL True PC9_epitope_Rep1 906.49231560894 906.49120993586 37.011 2 -0.8208150246371877 0.25363989062432896 1.0 ['ENSG00000142235|ENST00000600059|LMTK3'] 45087 8647 IPKKNWSRLP True PC9_epitope_Rep6 1237.72952618253 1237.72789490379 43.087 3 -0.8208911447468644 0.25366126007472833 1.0 ['nc|ENSG00000096060|Q13451-2|FKBP5'] 63075 12898 LLQLIHLP True H1975_Epitope_Rep2 945.60113778193 945.6000499358599 54.724 2 -0.8208926474567999 0.25366126007472833 1.0 ['nc|ENSG00000166153|Q8N2C3|DEPDC4', 'ENSG00000166153|ENST00000550587|DEPDC4'] 65290 11987 LQYLERLYMKR True H1975_Epitope_Rep3 1511.8282542476297 1511.82714993586 51.265 2 -0.8209290766539601 0.2536719443410542 1.0 ['ENST00000560213.1_1_15:99796138-99796378:+|nuORF', 'ENST00000558500.5_1_15:99796138-99837514:+|nuORF', 'nc|ENSG00000168904|Q86X40-2|LRRC28', 'ENSG00000168904|ENST00000301981|LRRC28'] 27420 9020 FLYDTHQNLR True NCI_RA007_Epitope_Rep3 1305.6465844042102 1305.64548993586 42.575 2 -0.8209599268545293 0.25369694366902873 1.0 ['ENSG00000197943|ENST00000564138|PLCG2'] 117858 15059 TVYPTDPP True PC9_epitope_Rep6 888.4228986364399 888.42180993586 69.973 2 -0.8210006274873901 0.2537039953046939 1.0 ['ENSG00000154124|ENST00000284274|OTULIN'] 26116 15032 FGSPEWDDYS True H1975_Epitope_Rep3 1201.45638359269 1201.45528993586 63.213 2 -0.8210275808616243 0.2537039953046939 1.0 ['ENSG00000164776|ENST00000297373|PHKG1', 'nc|ENSG00000164776|Q16816-2|PHKG1'] 99542 8590 SIDYVENK True H1975_Epitope_Rep3 966.46582607758 966.46472993586 38.032 2 -0.821063199286441 0.2537289931002892 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R2486Efs*2|1|0.46|ENSG00000168702|chr2:140541030-140541030|T/-|frameshift_variant', 'LRP1B|p.I1892Nfs*4|1|0.17|ENSG00000168702|chr2:140769298-140769299|-/C|frameshift_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 135902 4255 WPQRFYHHCPV True NCI_RA007_Epitope_Rep1 1468.68225872028 1468.68116993586 20.665 2 -0.8210636196294671 0.25373604351560264 1.0 ['ENST00000583268.1_1_17:38412646-38433335:+|nuORF'] 70753 17904 LWWWSWRWWKL True H1975_Epitope_Rep1 1731.88267277899 1731.8815699358602 74.565 2 -0.8210718893641908 0.25373604351560264 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 97374 7428 SEDNDEPGDED True H1975_Epitope_Rep3 1220.3952994577598 1220.39420993586 33.549 2 -0.8210943508128504 0.25374672564091555 1.0 ['MYT1L|p.G1020Afs*19|1|0.17|ENSG00000186487|chr2:1839170-1839170|C/-|frameshift_variant', 'MYT1L|p.F1022Sfs*17|1|0.61|ENSG00000186487|chr2:1839164-1839164|A/-|frameshift_variant', 'nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L'] 86956 17979 QLVRHRLFRE True NCI_RA007_Epitope_Rep4 1352.7789359864398 1352.7772949037899 77.794 3 -0.8211027201845369 0.25375740746042197 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 127238 8413 VLWTDDLAP True H1975_Epitope_Rep1 1028.5178616504397 1028.51676993586 37.288 2 -0.8211696044591565 0.2537715054532963 1.0 ['nc|ENSG00000112038|P35372-18|OPRM1'] 102924 18599 SPAYYEFIGVS True PC9_epitope_Rep6 1231.57610480255 1231.5750099358602 84.185 2 -0.8211781240902614 0.2537715054532963 1.0 ['ENSG00000184497|ENST00000375353|TMEM255B'] 79744 5503 PEAAGGKYRST True NCI_RA007_Epitope_Rep1 1135.56218607391 1135.56108993586 25.477 2 -0.8212305910149127 0.2537715054532963 1.0 ['EXOC4|p.A3P|1|0.14|ENSG00000131558|chr7:133253108-133253108|G/C|missense_variant'] 125557 3741 VKKHKKKRVV True PC9_epitope_Rep5 1248.85064437472 1248.84954993586 19.475 2 -0.8212742612815297 0.2537715054532963 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 36879 23604 GVLLRRYSR True PC9_epitope_Rep3 1118.66726027914 1118.6661699358601 96.078 2 -0.8213181007286753 0.2537749216390674 1.0 ['GPX1|p.P175L|1|0.2|ENSG00000233276|chr3:49357476-49357476|G/A|missense_variant'] 5995 24616 APIKRHRLVN True PC9_epitope_Rep4 1202.7360085453 1202.73490993586 103.18 2 -0.8213752373333969 0.2537749216390674 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|11|1|sense'] 36062 6196 GVAALGLAAV True PC9_epitope_Rep2 840.5069030439199 840.50580993586 29.226 2 -0.8213993307046308 0.2537749216390674 1.0 ['nc|ENSG00000117791|Q969Z3-2|MTARC2', 'ENSG00000117791|ENST00000366913|MTARC2'] 66536 8805 LSHSPLPAHLQ True NCI_RA007_Epitope_Rep4 1198.64585612822 1198.64474993586 40.679 2 -0.8214104226141802 0.2537962817191682 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'ENST00000609762.1_1_7:138978594-138982579:+|nuORF'] 100545 16749 SLCCHCHS True PC9_epitope_Rep1 888.3040635404002 888.30296993586 69.252 2 -0.8214626633908363 0.2537962817191682 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 25154 59 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 0.34437 2 -0.82146625973402 0.25379969659673124 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15361 9786 EAGPEVDPEE True H1975_Epitope_Rep3 1070.44039917538 1070.4393099358601 42.666 2 -0.8214713009270858 0.25379969659673124 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'KDM4B-AKAP8L|1|fusion'] 35694 3660 GTEWYRKKMPF True H1975_Epitope_Rep3 1441.7176411694898 1441.71598490379 19.122 3 -0.8214716753540761 0.25379969659673124 1.0 ['HS3ST5|p.I136T|1|0.28|ENSG00000249853|chr6:114057891-114057891|A/G|missense_variant'] 131382 13847 VTHDQARKRLT True PC9_epitope_Rep1 1323.73713074411 1323.7360299358602 58.104 2 -0.8215025121895219 0.2538103756708408 1.0 ['ENSG00000213977|ENST00000225525|TAX1BP3'] 105380 22798 SRRRRRRQQRR True NCI_RA007_Epitope_Rep4 1609.96863628733 1609.96752993586 98.977 2 -0.8215345903517598 0.25381742204158736 1.0 ['ENST00000397992.5_1_16:72984846-73092758:-|nuORF'] 129894 25475 VRSKGRKF True PC9_epitope_Rep3 976.5930327097199 976.5924849679301 103.43 1 -0.8215618641269459 0.25381742204158736 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 84020 19107 PVTLNLLPKLP True PC9_epitope_Rep1 1203.7590949753098 1203.75745490379 78.284 3 -0.8216036438659832 0.25384241105927474 1.0 ['ENSG00000183668|ENST00000270077|PSG9', 'ENST00000593983.5_1_19:43519347-43523525:-|nuORF', 'nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENSG00000221878|ENST00000406070|PSG7', 'ENSG00000170848|ENST00000187910|PSG6', 'nc|ENSG00000170848|Q00889|PSG6', 'ENSG00000221826|ENST00000327495|PSG3'] 30630 1310 GAKKKKKKKK True NCI_RA007_Epitope_Rep3 1170.8288463009796 1170.82720490379 7.4507 3 -0.8217419544730823 0.2539246411654431 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 65668 11027 LSAPQKPQL True PC9_epitope_Rep3 980.5654805492 980.56438993586 47.407 2 -0.8217997864996035 0.2539603039452784 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 12109 12409 DIAQSRVEI True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 52.761 2 -0.8218342124177008 0.2539603039452784 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF', 'ENST00000512792.2_1_12:112191278-112193633:+|nuORF'] 92057 23132 RKSSKLIKK True NCI_RA007_Epitope_Rep2 1086.7237125261 1086.7226099358602 96.596 2 -0.8220188453033289 0.2540139091611574 1.0 ['nc|ENSG00000156510|Q2TB90-3|HKDC1'] 58220 4690 LELGAHAP True NCI_RA007_Epitope_Rep5 806.42865272322 806.42754993586 24.727 2 -0.8221155992113657 0.25404229745585666 1.0 ['ENSG00000119919|ENST00000344586|NKX2-3'] 66607 16995 LSIWILLF True NCI_RA007_Epitope_Rep3 1003.6106398364699 1003.61007496793 74.711 1 -0.8221239690854567 0.25404229745585666 1.0 ['ENSG00000176988|ENST00000370467|FMR1NB'] 92566 24227 RMLRRLMAIAD True PC9_epitope_Rep5 1344.74823010512 1344.7471299358601 98.196 2 -0.8221262144024026 0.25404229745585666 1.0 ['MAP3K1|p.R853L|1|0.18|ENSG00000095015|chr5:56881758-56881758|G/T|missense_variant'] 31370 12564 GDRLVEVNGVN True H1975_Epitope_Rep2 1170.5992998586198 1170.59820993586 53.421 2 -0.8221545500666055 0.25404229745585666 1.0 ['nc|ENSG00000065054|Q15599-2|NHERF2', 'ENSG00000065054|ENST00000424542|NHERF2'] 63035 4407 LLQAGKAG True PC9_epitope_Rep4 756.4493881678 756.44828993586 23.398 2 -0.8221926659431771 0.2540815888505731 1.0 ['ENSG00000278619|ENST00000614766|MRM1'] 26813 6702 FLAGGRPP True NCI_RA007_Epitope_Rep1 813.44972252097 813.44862993586 30.08 2 -0.8222131823533981 0.2540922619047619 1.0 ['DLGAP3|p.A347Pfs*121|1|0.21|ENSG00000116544|chr1:34904345-34904345|C/-|frameshift_variant', 'ENSG00000116544|ENST00000373347|DLGAP3'] 43548 5382 IGQVHEEFK True NCI_RA007_Epitope_Rep4 1085.5505587610498 1085.54946993586 27.269 2 -0.8222766056540264 0.2541172430568473 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1', 'ENST00000600393.1_1_19:17881687-17885288:+|nuORF'] 67912 22450 LTCTKFSPQL True PC9_epitope_Rep5 1136.5899810448798 1136.5888899358602 91.354 2 -0.8223472573726698 0.25413858722868465 1.0 ['ENST00000465150.6_1_X:48750763-48750856:-|nuORF'] 234 8483 AAFTGVSAA True PC9_epitope_Rep6 793.39701824177 793.39592993586 42.344 2 -0.8223610957994527 0.25413858722868465 1.0 ['ENST00000462537.3_1_6:36646652-36648255:+|nuORF'] 32810 17579 GHGVKGVSSLF True PC9_epitope_Rep3 1086.5821932425 1086.58108993586 72.805 2 -0.8223809212931713 0.2541453853527333 1.0 ['ENSG00000183347|ENST00000370456|GBP6', 'nc|ENSG00000183347|Q6ZN66-2|GBP6'] 59546 11918 LFSTKTHLS True NCI_RA007_Epitope_Rep5 1032.5603951687601 1032.55928993586 52.499 2 -0.8224194795070624 0.2541453853527333 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 68140 16073 LTDPVLFT True H1975_Epitope_Rep3 904.49058427344 904.49003496793 67.281 1 -0.8225074544209284 0.2541453853527333 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'ADGRL2|p.K951Nfs*54|1|0.08|ENSG00000117114|chr1:81970440-81970440|A/-|frameshift_variant', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 51029 3780 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 19.118 3 -0.822514916741365 0.2541453853527333 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 94348 17998 RRRLLPGH True NCI_RA007_Epitope_Rep1 1003.6151651366299 1003.61406993586 74.146 2 -0.8225256614662163 0.2541453853527333 1.0 ['ENST00000433005.1_1_7:17338824-17338914:-|nuORF'] 58031 10554 LEHTWRQLRRS True PC9_epitope_Rep4 1480.8011279829998 1480.79947490379 48.326 3 -0.8225374180674085 0.2541453853527333 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 3704 5148 AGRRWGQARP True NCI_RA007_Epitope_Rep4 1153.6217070690495 1153.62007490379 26.325 3 -0.8225638397910132 0.2541560559672666 1.0 ['ENST00000573951.1_1_16:3313772-3314576:+|nuORF'] 39679 22144 HLRQHQLLLL True PC9_epitope_Rep6 1269.7669743204099 1269.76586993586 98.119 2 -0.8226044194525999 0.25418103263279873 1.0 ['ENST00000377411.4_1_1:9171491-9189192:-|nuORF'] 100729 8590 SLDTYLKK True H1975_Epitope_Rep3 966.5385970950199 966.53750993586 38.032 2 -0.8226436484394486 0.25421304111470344 1.0 ['ENSG00000096968|ENST00000381652|JAK2'] 23194 5584 EVLNDPENMEK True H1975_Epitope_Rep1 1316.5918315196798 1316.59072993586 26.544 2 -0.822657728008918 0.25421304111470344 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 130586 12637 VSSDQQEHF True PC9_epitope_Rep1 1075.45705229903 1075.4559499358602 53.479 2 -0.8226801257328037 0.25421304111470344 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 40360 8479 HQRWRNWQRRK True NCI_RA007_Epitope_Rep1 1649.8875920019698 1649.8859549037902 36.981 3 -0.8227088642306347 0.25423437857633324 1.0 ['ENST00000291074.9_2_17:505039-505090:-|nuORF'] 58460 8488 LEPQWYRVLEK True PC9_epitope_Rep1 1459.7823496010299 1459.78069490379 37.485 3 -0.8227433324653567 0.25423437857633324 1.0 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENST00000476031.1_1_1:161515507-161519517:-|nuORF'] 85089 22860 QEKRKLSV True PC9_epitope_Rep2 986.5872786229398 986.58618993586 93.419 2 -0.8227896995460697 0.25425571481704 1.0 ['ENSG00000197798|ENST00000533050|FAM118B'] 72729 17116 MNIIWTLP True NCI_RA007_Epitope_Rep5 986.5259242363401 986.52482993586 72.609 2 -0.8228056027231732 0.25425571481704 1.0 ['nc|ENSG00000147535|Q8NEB5-4|PLPP5', 'ENST00000531483.1_1_8:38124719-38125149:-|nuORF', 'ENST00000527793.1_1_8:38124719-38126401:-|nuORF'] 95469 22953 RWLVRFKTI True NCI_RA007_Epitope_Rep5 1217.7396969434099 1217.73805490379 95.514 3 -0.8228695226591208 0.2542877168890987 1.0 ['ENSG00000185518|ENST00000394232|SV2B', 'nc|ENSG00000185518|Q7L1I2-2|SV2B'] 112914 15869 TLLDTFVFH True PC9_epitope_Rep2 1091.56514619603 1091.56404993586 66.297 2 -0.8228771850690794 0.2542877168890987 1.0 ['ENST00000485050.5_1_3:113805105-113805411:+|nuORF'] 123403 12693 VGNAEILP True PC9_epitope_Rep5 811.44396843419 811.44286993586 53.828 2 -0.8228932820475046 0.2542877168890987 1.0 ['XAF1|p.P187A|1|0.19|ENSG00000132530|chr17:6770694-6770694|C/G|missense_variant'] 69931 16945 LVKKKKKKKKG True PC9_epitope_Rep6 1311.9442104063899 1311.94310993586 77.724 2 -0.8228997579783538 0.2542983836361036 1.0 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 125555 4955 VKKHKKKRVV True PC9_epitope_Rep1 1248.85064437472 1248.84954993586 23.919 2 -0.8229121871953125 0.25430905007795623 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 16449 11016 EELEDETRRL True NCI_RA007_Epitope_Rep1 1288.6259085292797 1288.6248099358602 46.845 2 -0.8229985746906757 0.2543374097117929 1.0 ['ENSG00000051382|ENST00000674063|PIK3CB'] 20517 16730 EPPALALA True PC9_epitope_Rep2 780.43815477776 780.43704993586 69.599 2 -0.8230132326961129 0.2543374097117929 1.0 ['ENST00000296666.12_1_5:126889918-126890026:+|nuORF'] 25030 16652 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 68.892 2 -0.8230135932471093 0.2543374097117929 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 77536 12020 NTDKDRSL True PC9_epitope_Rep5 947.46722305991 947.46612993586 51.23 2 -0.8230256137202748 0.2543374097117929 1.0 ['ENST00000457179.5_1_22:22317029-22324763:-|nuORF', 'ENST00000444502.5_1_22:22313806-22324763:-|nuORF', 'nc|ENSG00000100038|O95985-3|TOP3B', 'nc|ENSG00000100038|O95985-2|TOP3B', 'ENSG00000100038|ENST00000357179|TOP3B'] 92018 21798 RKRRKRKRIRR True PC9_epitope_Rep4 1608.0872948680296 1608.0861899358601 92.04 2 -0.8231528391814754 0.2543730423216099 1.0 ['ENST00000277225.9_3_9:109625513-109685652:+|nuORF'] 132439 23552 VVAVAGTIIL True PC9_epitope_Rep6 954.61136811246 954.61026993586 103.74 2 -0.8231710522212004 0.2543730423216099 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 19470 12403 ELNQFRTDLE True PC9_epitope_Rep1 1263.6095301891498 1263.6084299358602 52.569 2 -0.8232218417891629 0.25439048109375895 1.0 ['ALOX12|p.V623E|1|0.33|ENSG00000108839|chr17:7010299-7010299|T/A|missense_variant'] 124369 23898 VGTYWKRLM True PC9_epitope_Rep4 1152.6113851958 1152.61087496793 100.37 1 -0.8232684835491191 0.25439048109375895 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 97822 15584 SELLIHWEN True PC9_epitope_Rep1 1139.5611234447501 1139.56002993586 64.766 2 -0.8232891432479212 0.25439048109375895 1.0 ['ENST00000485671.1_1_X:104993011-105009296:+|nuORF'] 43565 14582 IGSFFPDF True PC9_epitope_Rep5 928.4330693973199 928.43196993586 61.091 2 -0.8232959817940064 0.25439048109375895 1.0 ['nc|ENSG00000120907|P35348-2|ADRA1A', 'nc|ENSG00000120907|P35348-3|ADRA1A', 'nc|ENSG00000120907|P35348-4|ADRA1A', 'ENSG00000120907|ENST00000380573|ADRA1A'] 107661 12030 SVQPKDSL True PC9_epitope_Rep5 872.46034677432 872.45924993586 51.267 2 -0.823301227374128 0.25439048109375895 1.0 ['ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 27717 20919 FPPSKKHHK True PC9_epitope_Rep1 1104.6192474575598 1104.6181499358602 85.287 2 -0.8233123722316463 0.25439048109375895 1.0 ['nc|ENSG00000244694|Q6ZW05|PTCHD4', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 5046 10629 ALKRTLQLI True NCI_RA007_Epitope_Rep3 1054.6862643882198 1054.6851699358601 48.856 2 -0.8233209693756056 0.25439048109375895 1.0 ['ENST00000368966.9_3_6:109615628-109650288:+|nuORF'] 59759 6852 LGEDLVQPP True H1975_Epitope_Rep3 966.5022115862998 966.50110993586 31.314 2 -0.8233391172759394 0.2544154451197712 1.0 ['ENSG00000175463|ENST00000542590|TBC1D10C', 'ENST00000530967.6_1_11:67171601-67174164:+|nuORF', 'nc|ENSG00000175463|Q8IV04-2|TBC1D10C'] 126839 20618 VLPYIFED True PC9_epitope_Rep2 994.5011489571399 994.50004993586 84.741 2 -0.823382959463588 0.25442610759946227 1.0 ['nc|ENSG00000167861|Q8IV36-2|HID1', 'ENSG00000167861|ENST00000425042|HID1'] 66780 15272 LSLRAPETVP True PC9_epitope_Rep2 1081.6131590176099 1081.61206993586 64.02 2 -0.8234768870379596 0.2544437929900327 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant', 'ROS1|p.F1354Lfs*35|1|0.3|ENSG00000047936|chr6:117356708-117356708|A/-|frameshift_variant'] 63219 6772 LLSEETPSAA True PC9_epitope_Rep1 1016.5026055091199 1016.50150993586 30.854 2 -0.8234779146019204 0.2544437929900327 1.0 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 75854 18422 NLQDWTEI True PC9_epitope_Rep4 1017.4767251144499 1017.47562993586 78.928 2 -0.8234783289736838 0.2544437929900327 1.0 ['ENSG00000154114|ENST00000683345|TBCEL', 'ENST00000533134.1_1_11:120924418-120928239:+|nuORF'] 62813 21182 LLLVRWKFQQE True NCI_RA007_Epitope_Rep2 1458.83471952706 1458.83362993586 87.617 2 -0.8235178428362787 0.25446147686323856 1.0 ['ENST00000360409.7_1_2:206547732-206547855:+|nuORF'] 85589 8044 QGGSKPRSRKD True H1975_Epitope_Rep1 1214.6479813865399 1214.6468899358601 35.886 2 -0.8235321595857856 0.25446147686323856 1.0 ['ENST00000335500.8_1_17:42478071-42478113:-|nuORF'] 57639 15757 LEEEKKKKSWD True H1975_Epitope_Rep3 1418.7405443586997 1418.7394499358602 66.053 2 -0.8235896408984601 0.25446147686323856 1.0 ['ENSG00000157601|ENST00000398598|MX1'] 52499 9644 KKWWRRKYLEF True H1975_Epitope_Rep3 1638.9147011832595 1638.9130649037902 42.112 3 -0.8236157088327214 0.25450073641914406 1.0 ['ENST00000433473.7_1_1:40558092-40558149:-|nuORF'] 43243 18198 IFLTNGRTL True PC9_epitope_Rep2 1033.59202965021 1033.59092993586 75.305 2 -0.823703023390705 0.2545074993923276 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF', 'ENST00000475277.1_1_1:235876468-235887465:-|nuORF'] 105778 8445 SSHHALLDRG True H1975_Epitope_Rep1 1091.54720471611 1091.5461099358602 37.412 2 -0.8237132332726396 0.2545074993923276 1.0 ['ENST00000526177.5_1_11:75155472-75160957:-|nuORF', 'ENST00000527322.5_1_11:75155472-75168807:-|nuORF'] 60187 10445 LGPHLNVVN True PC9_epitope_Rep1 961.53451477409 961.53340993586 45.065 2 -0.8237199801158569 0.2545074993923276 1.0 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 78836 8327 PAEAIKEHERW True PC9_epitope_Rep4 1364.68369818892 1364.68260993586 39.488 2 -0.8237512306649001 0.2545074993923276 1.0 ['ENSG00000174945|ENST00000683327|AMZ1'] 116537 13292 TTTNYLIE True NCI_RA007_Epitope_Rep4 953.4705771048499 953.47002496793 58.267 1 -0.8237631804375328 0.2545074993923276 1.0 ['ENSG00000151694|ENST00000310823|ADAM17', 'ADAM17|p.L285Sfs*6|1|0.24|ENSG00000151694|chr2:9521304-9521307|TGAG/-|frameshift_variant', 'nc|ENSG00000151694|P78536-2|ADAM17'] 41623 19057 IAECWRSRP True PC9_epitope_Rep1 1116.5498475683999 1116.54874993586 78.094 2 -0.8237641600829848 0.2545074993923276 1.0 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF'] 80539 6005 PGPLSKQGS True NCI_RA007_Epitope_Rep3 869.46068112749 869.46013496793 30.601 1 -0.8238825684819493 0.25456807068714077 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 44726 17401 ILVYELLTG True PC9_epitope_Rep4 1019.5902983147099 1019.58920993586 74.928 2 -0.8238875194939367 0.25456807068714077 1.0 ['nc|ENSG00000138669|Q13237-2|PRKG2', 'ENSG00000138669|ENST00000264399|PRKG2'] 46124 12740 ISIYNSTRDLL True PC9_epitope_Rep1 1293.69286589029 1293.69121490379 53.88 3 -0.8239102846234055 0.25456807068714077 1.0 ['nc|ENSG00000092969|P61812-2|TGFB2', 'ENSG00000092969|ENST00000366930|TGFB2'] 58401 10776 LENQTFRFDY True NCI_RA007_Epitope_Rep1 1331.61461556959 1331.61350993586 45.911 2 -0.8239293157819656 0.2545787283931201 1.0 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 47640 8443 IWETFRRWHQK True NCI_RA007_Epitope_Rep2 1585.82661445485 1585.82497490379 37.483 3 -0.8239443844850617 0.2545857459432411 1.0 ['ENST00000467796.5_1_22:51221718-51237143:+|nuORF', 'ENST00000480246.1_1_22:51222460-51237143:+|nuORF'] 23353 14564 EVRLAVREAI True PC9_epitope_Rep5 1154.6771562565 1154.67550490379 61.019 3 -0.8239451807286192 0.2545857459432411 1.0 ['ENSG00000100726|ENST00000262319|TELO2'] 100311 16613 SKIEWDTDQWK True PC9_epitope_Rep5 1434.6779441021397 1434.6768499358602 68.908 2 -0.8239828339125406 0.25458912334877337 1.0 ['ENSG00000176809|ENST00000584306|LRRC37A3', 'ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'SMURF2-LRRC37A3|2|fusion', 'SMURF2-LRRC37A3|1|fusion', 'ENST00000572638.1_1_17:44625595-44632942:+|nuORF'] 15897 15042 EDKKVRVQ True NCI_RA007_Epitope_Rep3 1000.5665431783598 1000.56544993586 66.627 2 -0.8239935783076962 0.25458912334877337 1.0 ['nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14', 'CDK14|p.E170Kfs*16|1|0.71|ENSG00000058091|chr7:90790615-90790615|G/-|frameshift_variant'] 72325 12496 MILTVFCLSV True PC9_epitope_Rep2 1124.59737492444 1124.59573490379 53.374 3 -0.8240039031479585 0.25458912334877337 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'SCN8A|p.E294*|1|0.28|ENSG00000196876|chr12:51699740-51699741|-/T|frameshift_variant', 'ENST00000472119.1_1_2:167159564-167162327:-|nuORF', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.D586Tfs*55|1|0.06|ENSG00000136531|chr2:165323239-165323239|G/-|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 64123 19794 LPEKRRTRA True PC9_epitope_Rep5 1125.67307393557 1125.67196993586 81.183 2 -0.8240818923264457 0.2545997798395974 1.0 ['ENST00000605833.1_1_10:17258248-17271432:-|nuORF'] 57945 4151 LEGLFFPEEK True NCI_RA007_Epitope_Rep2 1207.6124903112698 1207.6108349037902 20.785 3 -0.8241334156944466 0.25460289324718394 1.0 ['nc|ENSG00000159753|Q6F5E8-2|CARMIL2', 'ENSG00000159753|ENST00000334583|CARMIL2'] 23604 7614 EWFWWYWQKEK True H1975_Epitope_Rep1 1714.7932486378998 1714.79161490379 34.276 3 -0.8241358176424867 0.25460289324718394 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 85320 6895 QERSLVTVP True H1975_Epitope_Rep3 1027.5662088251897 1027.5651099358602 31.481 2 -0.8241393949973806 0.25460289324718394 1.0 ['ENST00000470294.5_1_1:155058014-155058898:+|nuORF'] 71449 16180 LYTGTVSSF True PC9_epitope_Rep6 973.47566248529 973.47511496793 74.592 1 -0.8241812807307758 0.25460289324718394 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 111866 10776 TINGSTHVL True PC9_epitope_Rep1 940.4977949122 940.49668993586 46.337 2 -0.8241828787781252 0.25460289324718394 1.0 ['nc|ENSG00000164270|Q13639-4|HTR4', 'nc|ENSG00000164270|Q13639-7|HTR4', 'nc|ENSG00000164270|Q13639-3|HTR4', 'nc|ENSG00000164270|Q13639-5|HTR4', 'nc|ENSG00000164270|Q13639-2|HTR4', 'ENSG00000164270|ENST00000377888|HTR4', 'nc|ENSG00000164270|Q13639-6|HTR4', 'nc|ENSG00000164270|Q13639-9|HTR4', 'nc|ENSG00000164270|Q13639-8|HTR4'] 28321 11651 FRRHIRQHS True PC9_epitope_Rep5 1235.67480527107 1235.6731649037902 49.811 3 -0.824186230959468 0.25460289324718394 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 42024 19331 IDGVLLCGP True PC9_epitope_Rep1 885.46298962661 885.46188993586 79.162 2 -0.8241895039262439 0.25460289324718394 1.0 ['nc|ENSG00000169598|O76075-2|DFFB'] 106701 5678 STTSVNNAYTP True NCI_RA007_Epitope_Rep3 1153.5251318588498 1153.52347490379 29.317 3 -0.824258339333277 0.2546564318081107 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 103779 7056 SPVVPAPR True PC9_epitope_Rep4 821.47593726881 821.47484993586 34.403 2 -0.8242989981788491 0.25466344573250044 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 27528 9751 FNCNFAPYFT True H1975_Epitope_Rep2 1222.5117307241799 1222.5106299358602 42.496 2 -0.8243053205116103 0.25466344573250044 1.0 ['ENSG00000138135|ENST00000371852|CH25H'] 113507 13730 TLTFNEDFKIF True H1975_Epitope_Rep1 1373.68671788069 1373.68562993586 57.951 2 -0.8243799906785592 0.2546704592558711 1.0 ['ENSG00000162627|ENST00000306121|SNX7', 'nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7'] 59769 5246 LGEESWFIWK True NCI_RA007_Epitope_Rep1 1293.6393737654496 1293.63772490379 24.489 3 -0.8244250117298864 0.2546704592558711 1.0 ['ENST00000233336.6_1_2:113288860-113289121:+|nuORF'] 118098 14894 TYGKEDVPLS True PC9_epitope_Rep5 1107.5448046742697 1107.54370993586 62.293 2 -0.824446648393229 0.2547130708211248 1.0 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 16742 5730 EESQRKPLP True H1975_Epitope_Rep1 1082.5720224816198 1082.57092993586 27.109 2 -0.8244691723832085 0.2547130708211248 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B'] 28609 5532 FSHEEIAM-[Oxidation] True NCI_RA007_Epitope_Rep2 978.4116827101799 978.41058993586 26.135 2 -0.824492146804875 0.2547130708211248 1.0 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 61023 10063 LIETGQGL True H1975_Epitope_Rep2 829.4545331178899 829.45342993586 43.699 2 -0.8245243837775327 0.2547130708211248 1.0 ['ENST00000393077.2_1_10:114576537-114576684:+|nuORF'] 20454 10168 EPHIREMKIYI True PC9_epitope_Rep2 1427.75950598147 1427.75785490379 44.448 3 -0.8246126425060678 0.2547808935768802 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H'] 64288 7326 LPKCWNYRWRW True H1975_Epitope_Rep1 1606.7979571788599 1606.7963249037898 33.188 3 -0.8247030049494433 0.2548201294896165 1.0 ['chr2:65048212-65055530|299|10.03|0.0|19.94|-|1|TE_info:AluJo,AluJo_dup8582,Alu,SINE,donor,+,65055530,65055630|LINC02245,None|2'] 95594 13743 RWWFRRLFLIF True PC9_epitope_Rep2 1638.9299573245796 1638.9283049037901 58.15 3 -0.8247786563013877 0.2548736565286988 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 66143 6244 LSENGKHVK True NCI_RA007_Epitope_Rep2 1010.5508931142201 1010.54978993586 28.893 2 -0.8248543649281337 0.254894954980706 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 30196 5659 FYQRFRHFQYH True H1975_Epitope_Rep1 1627.77966426243 1627.77802490379 26.837 3 -0.8249490255551493 0.254894954980706 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 75261 10993 NIFYMPYWMIY True NCI_RA007_Epitope_Rep2 1539.69306621443 1539.69196993586 47.37 2 -0.8249791847292463 0.25490560375012505 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 27542 10895 FNDGNAAVV True PC9_epitope_Rep5 905.4242956187699 905.42374496793 46.896 1 -0.8250565411450927 0.2549089661874411 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 55506 17070 LAGLDPPHSV True PC9_epitope_Rep4 1004.52909504048 1004.52798993586 73.658 2 -0.8250825620465054 0.2549089661874411 1.0 ['ENST00000498406.1_1_22:21355751-21355970:-|nuORF'] 120095 12203 VDVVLEKSE True NCI_RA007_Epitope_Rep2 1016.5389910178399 1016.53788993586 52.065 2 -0.8250920160457799 0.2549089661874411 1.0 ['ENSG00000214456|ENST00000381848|PLIN5', 'ENST00000586020.1_1_19:4529055-4529292:-|nuORF'] 132518 4936 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep6 1029.44371111445 1029.4426099358602 26.554 2 -0.8251344817901399 0.25491961414791 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 77718 16930 NTLERREKHEK True PC9_epitope_Rep3 1438.7640737679396 1438.7629699358602 70.277 2 -0.8251663311821712 0.25494455241797187 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 58957 5582 LETTGTSLP True NCI_RA007_Epitope_Rep1 917.47057710485 917.46948993586 25.78 2 -0.8252165188292199 0.2549694899752776 1.0 ['ENSG00000136014|ENST00000258499|USP44'] 14781 14704 DVPAEPFP True H1975_Epitope_Rep2 870.4123339527399 870.41122993586 61.721 2 -0.825264201828611 0.255023007230844 1.0 ['ENST00000468090.5_1_21:45179541-45179850:+|nuORF'] 12980 21898 DLLPLSLIPV True PC9_epitope_Rep6 1078.66379760814 1078.66327496793 97.132 1 -0.8252803336644904 0.25503000857387825 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2'] 13113 10820 DLQRVKQEL True PC9_epitope_Rep2 1127.62987171091 1127.6287699358602 46.938 2 -0.8253430776164958 0.25503000857387825 1.0 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000588273.1_1_19:46027302-46029432:+|nuORF'] 117131 10253 TVKLTQDL True PC9_epitope_Rep1 916.52294703088 916.52184993586 44.321 2 -0.8254488731690311 0.2550619436148779 1.0 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 132002 7948 VTSPLPAP True PC9_epitope_Rep3 780.43815477776 780.43704993586 35.552 2 -0.825469381860848 0.2550619436148779 1.0 ['ENSG00000185670|ENST00000394807|ZBTB3', 'nc|ENSG00000185670|Q9H5J0|ZBTB3'] 4111 8955 AHSHSYSH True PC9_epitope_Rep2 924.3838277891202 924.38272993586 39.801 2 -0.8255002926950756 0.2550619436148779 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 59533 18425 LFSGSVAAIA True PC9_epitope_Rep4 934.5123823471799 934.51128993586 78.941 2 -0.8255406649302446 0.2550725880201189 1.0 ['ENST00000373504.10_1_X:72783056-72783248:+|nuORF'] 97349 8523 SEDEFGSDH True H1975_Epitope_Rep2 1021.3624832078499 1021.36138993586 37.738 2 -0.8255773513456589 0.25512609844966777 1.0 ['ENST00000502249.6_1_4:119435248-119475252:+|nuORF'] 83883 18948 PVPLAHPLPV True PC9_epitope_Rep4 1038.6226015025 1038.62150993586 80.971 2 -0.8256006815335052 0.25513644806400915 1.0 ['nc|ENSG00000215906|A8MY62|LACTBL1', 'ENSG00000215906|ENST00000426928|LACTBL1'] 101384 10180 SLKGHRKAW True H1975_Epitope_Rep1 1081.61449643029 1081.6133899358601 44.097 2 -0.8256088765665645 0.25513644806400915 1.0 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263'] 72540 18192 MLKWISWR True NCI_RA007_Epitope_Rep4 1118.60590589254 1118.6048099358602 78.726 2 -0.8256170029197403 0.25513644806400915 1.0 ['nc|ENSG00000160145|O60229-5|KALRN', 'ENST00000393496.5_1_3:124223749-124393462:+|nuORF'] 44177 6678 IIVYLDVP True NCI_RA007_Epitope_Rep5 930.5426198462999 930.54152993586 32.355 2 -0.8256380392261702 0.25513644806400915 1.0 ['THNSL1|p.S178Lfs*5|1|0.22|ENSG00000185875|chr10:25023756-25023756|C/-|frameshift_variant', 'THNSL1|p.G179Efs*4|1|0.23|ENSG00000185875|chr10:25023758-25023758|G/-|frameshift_variant', 'ENSG00000185875|ENST00000376356|THNSL1'] 130748 7194 VSYFWGLYSVK True NCI_RA007_Epitope_Rep2 1347.68632395787 1347.6852299358602 32.603 2 -0.8256444945135724 0.25513644806400915 1.0 ['ENST00000590884.5_1_18:43447592-43462392:-|nuORF'] 74362 3412 NEQRWRWIFRS True NCI_RA007_Epitope_Rep1 1576.8011279829996 1576.7994749037903 17.172 3 -0.8257061064887498 0.25514344496513885 1.0 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 47180 8080 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep3 1208.4954293164699 1208.4943299358602 36.054 2 -0.8257205184758414 0.25514344496513885 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 67756 14874 LSYKVQPF True PC9_epitope_Rep5 980.5331177917598 980.53202993586 62.215 2 -0.8257492903282716 0.25515408683725516 1.0 ['ENST00000521259.1_1_8:87516185-87516770:+|nuORF'] 64995 11594 LQHLDLLNN True PC9_epitope_Rep6 1078.57710786206 1078.5760099358602 55.712 2 -0.8257880216408598 0.25517901534417237 1.0 ['ENSG00000108829|ENST00000225972|LRRC59'] 125120 10235 VIFPMFTFPKK True NCI_RA007_Epitope_Rep1 1353.75190141989 1353.7508099358602 43.823 2 -0.8257936455293976 0.25518965640402885 1.0 ['ENST00000532388.5_1_8:70617264-70744908:-|nuORF', 'SLCO5A1|p.M546Cfs*6|1|0.08|ENSG00000137571|chr8:69682330-69682330|T/-|frameshift_variant', 'nc|ENSG00000137571|Q9H2Y9-3|SLCO5A1', 'nc|ENSG00000137571|Q9H2Y9-2|SLCO5A1', 'ENSG00000137571|ENST00000260126|SLCO5A1'] 56088 9848 LATQFENWYKK True NCI_RA007_Epitope_Rep1 1426.7245003717396 1426.7234099358602 42.308 2 -0.8258674399712767 0.25521793168473833 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 16882 7971 EFIELDIDEPD True H1975_Epitope_Rep1 1333.5925427123298 1333.59144993586 35.61 2 -0.8258950527118138 0.25521793168473833 1.0 ['GHR|p.S482*|1|0.19|ENSG00000112964|chr5:42718952-42718952|C/-|frameshift_variant', 'nc|ENSG00000112964|P10912-4|GHR', 'ENSG00000112964|ENST00000230882|GHR'] 113248 13628 TLRALRLV True PC9_epitope_Rep1 940.6181848283999 940.61708993586 57.276 2 -0.8259233931990192 0.25521793168473833 1.0 ['ENSG00000188782|ENST00000456354|CATSPER4', 'nc|ENSG00000188782|Q7RTX7-2|CATSPER4'] 133392 22611 VVVLATAIA True PC9_epitope_Rep1 855.5429541994699 855.54184993586 91.784 2 -0.8259373094063541 0.25521793168473833 1.0 ['ENSG00000156875|ENST00000370152|MFSD14A'] 120312 12967 VEDVRPHHTDA True NCI_RA007_Epitope_Rep1 1274.6003624877799 1274.59926993586 54.429 2 -0.8260888689440757 0.2552851102731116 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 118865 11021 VAATTGSS True NCI_RA007_Epitope_Rep1 692.33408363204 692.3335349679301 46.864 1 -0.8260904764021465 0.2552851102731116 1.0 ['ENST00000316623.9_1_15:48937070-48937901:-|nuORF'] 119221 24654 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48572993586 103.32 2 -0.8261156156137925 0.2552851102731116 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 31161 8469 GAWGQKGLKGF True PC9_epitope_Rep1 1147.6138277239497 1147.61218490379 37.411 3 -0.8261274175700943 0.2552851102731116 1.0 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70-2|COL6A5'] 132154 11417 VTVMMWPL True PC9_epitope_Rep5 975.4921815799099 975.49108993586 48.915 2 -0.8261348128372988 0.2552851102731116 1.0 ['nc|ENSG00000141699|Q86VR2-2|RETREG3', 'ENSG00000141699|ENST00000309428|RETREG3'] 69402 8984 LTWMKLFP True H1975_Epitope_Rep1 1034.5623097450598 1034.56120993586 39.463 2 -0.8261431179569506 0.2552851102731116 1.0 ['KLHL28|p.G135Vfs*56|1|0.14|ENSG00000179454|chr14:44945525-44945525|C/-|frameshift_variant'] 130815 9524 VTAQIGIV True PC9_epitope_Rep2 799.4803539429099 799.47924993586 41.982 2 -0.8261915635775133 0.2552851102731116 1.0 ['ENSG00000167332|ENST00000396950|OR51E2'] 101547 20099 SLLGSENSVP True PC9_epitope_Rep2 1001.5029398622901 1001.50184993586 82.719 2 -0.8262015031458465 0.2552851102731116 1.0 ['ENST00000414141.1_1_2:70351366-70351546:-|nuORF'] 82026 19206 PLVSGVFSYSN True PC9_epitope_Rep6 1168.57643915572 1168.57534993586 86.528 2 -0.8262279036168159 0.2552851102731116 1.0 ['ENST00000587817.5_1_19:37660913-37663581:-|nuORF'] 21296 1994 EREFGSVDDEN True NCI_RA007_Epitope_Rep1 1295.5265884108296 1295.5254899358602 10.498 2 -0.8262953109342792 0.25530273814114923 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 100558 17082 SLCCHCHS True PC9_epitope_Rep3 888.3040635404002 888.30296993586 70.857 2 -0.8262982225863066 0.25530273814114923 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 55159 9461 LAALGDPRATP True PC9_epitope_Rep6 1080.5927579262 1080.5916699358602 46.631 2 -0.8263115937322035 0.25530273814114923 1.0 ['ENST00000529593.1_1_8:146277868-146278266:+|nuORF', 'ENST00000524395.5_1_8:146277868-146278117:+|nuORF'] 74179 6633 NEEIDVVTV True PC9_epitope_Rep3 1016.5026055091199 1016.50150993586 30.537 2 -0.8263613888877306 0.2553562246472033 1.0 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL'] 131842 18095 VTQSRLMSI True PC9_epitope_Rep3 1033.5590152697698 1033.5579099358602 74.799 2 -0.8264324055186456 0.2553811435019211 1.0 ['ENSG00000075539|ENST00000358350|FRYL'] 113450 13903 TLSQSVILP True PC9_epitope_Rep1 956.5542471591599 956.55314993586 58.315 2 -0.8264647535044684 0.25539177878709973 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 48675 17808 KAVGPKGNIL True PC9_epitope_Rep2 995.6127650947899 995.61166993586 73.791 2 -0.826498773141074 0.2554166964221952 1.0 ['ENST00000596658.1_1_19:50433558-50434160:+|nuORF'] 17214 9584 EGVKPFEC True PC9_epitope_Rep5 907.4109540537498 907.40984993586 41.826 2 -0.826569741059639 0.2554236828198866 1.0 ['ENSG00000066422|ENST00000312938|ZBTB11'] 139404 10468 YLNYPTQVIFK True H1975_Epitope_Rep1 1384.7390878067197 1384.73798993586 45.22 2 -0.8266152096977414 0.2554236828198866 1.0 ['nc|ENSG00000124786|Q9H1N7-3|SLC35B3', 'ENSG00000124786|ENST00000644923|SLC35B3'] 59385 17119 LFLKAGHTSL True PC9_epitope_Rep5 1085.6233297784902 1085.62222993586 70.869 2 -0.8266306222876656 0.25543431688994256 1.0 ['nc|ENSG00000008323|Q3KR16-3|PLEKHG6', 'ETV6-PLEKHG6|2|fusion', 'ETV6-PLEKHG6|1|fusion', 'nc|ENSG00000008323|Q3KR16-2|PLEKHG6', 'ENSG00000008323|ENST00000684764|PLEKHG6'] 65729 9280 LSCLVFLR True PC9_epitope_Rep5 949.54190865365 949.54080993586 40.644 2 -0.8266452708381375 0.25543765441796035 1.0 ['ENST00000445355.7_1_10:135075987-135076521:-|nuORF'] 37049 15593 GVPGELSLQV True H1975_Epitope_Rep1 997.5444107514498 997.54330993586 65.262 2 -0.8266656882259832 0.25543765441796035 1.0 ['ENST00000485800.6_1_10:102248942-102249915:-|nuORF'] 79407 14488 PATGDLLI True PC9_epitope_Rep5 798.44871946146 798.44762993586 60.729 2 -0.8266737392362591 0.25543765441796035 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 60106 8412 LGLTDRCRFFI True H1975_Epitope_Rep3 1339.7070764857897 1339.7059699358601 37.34 2 -0.8267148274290058 0.25545527247800753 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 82844 1091 PRSSSLWIELC True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 6.2019 3 -0.8267914401297617 0.25545527247800753 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 27332 5427 FLSGWKDNP True H1975_Epitope_Rep2 1062.51344497634 1062.5123499358601 25.901 2 -0.8267966938879371 0.25545527247800753 1.0 ['ENSG00000188676|ENST00000502986|IDO2', 'IDO2|p.G381Afs*8|1|0.19|ENSG00000188676|chr8:40015517-40015517|G/-|frameshift_variant'] 75634 12620 NLEERVVLK True PC9_epitope_Rep3 1098.6397081186199 1098.6386099358601 53.566 2 -0.8268236118794193 0.25548018564798286 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 138020 16639 YFWRLYHRMEE True NCI_RA007_Epitope_Rep1 1628.7558175833599 1628.75472993586 68.842 2 -0.8268578993278711 0.25550509810641764 1.0 ['FPGS|p.L163M|1|0.12|ENSG00000136877|chr9:127807073-127807073|C/A|missense_variant'] 34877 11258 GQLHYSVP True PC9_epitope_Rep2 899.45011644379 899.44900993586 48.629 2 -0.8269136374091822 0.2555406408865025 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'PCDHA9|p.F395Lfs*89|1|0.1|ENSG00000204961|chr5:140849673-140849674|-/G|frameshift_variant', 'PCDHA8|p.E38V|1|0.38|ENSG00000204962|chr5:140841434-140841434|A/T|missense_variant', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'nc|ENSG00000204963|Q9UN72-2|PCDHA7', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9'] 100928 19503 SLFFITIF True PC9_epitope_Rep6 986.5477052267399 986.54660993586 87.679 2 -0.8269649572994469 0.2555406408865025 1.0 ['ENST00000512903.1_1_4:24529549-24534804:-|nuORF'] 131656 17242 VTLTSIVP True PC9_epitope_Rep3 828.49566965388 828.49456993586 71.473 2 -0.8270529701300655 0.2555512716160448 1.0 ['ENSG00000165912|ENST00000298838|PACSIN3'] 12187 12274 DIFHERDYKKK True H1975_Epitope_Rep1 1477.7677621660494 1477.7666699358601 52.236 2 -0.8270832902328873 0.25555396916047973 1.0 ['ENST00000330137.11_1_17:57189463-57189511:-|nuORF'] 13269 15701 DLTDEEKQEYL True H1975_Epitope_Rep2 1381.62490546977 1381.6238099358602 65.563 2 -0.827128141441817 0.25555396916047973 1.0 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|533|28.23|0.3|6.56|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 97827 3299 SELNAGKG True NCI_RA007_Epitope_Rep4 774.3871818340599 774.38608993586 18.406 2 -0.8271502698380507 0.25555396916047973 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 36591 7062 GVHQGGNLL True PC9_epitope_Rep5 893.47191451753 893.47080993586 32.132 2 -0.8271592558124249 0.25555396916047973 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P', 'ENSG00000198445|ENST00000359963|CCT8L2'] 100811 14923 SLEIVPVGTV True PC9_epitope_Rep4 1012.580461907 1012.57936993586 65.342 2 -0.8271759514168054 0.25555396916047973 1.0 ['ENSG00000006025|ENST00000007414|OSBPL7', 'ENST00000579728.5_1_17:45885659-45892067:-|nuORF', 'ENST00000583167.5_1_17:45885659-45892067:-|nuORF'] 11479 5784 DFFWNETWYLK True H1975_Epitope_Rep1 1547.7085159544301 1547.70688490379 27.32 3 -0.8271886010722036 0.25555396916047973 1.0 ['ENSG00000172893|ENST00000355527|DHCR7'] 22060 12640 ESLRCNVEPV True PC9_epitope_Rep2 1144.55465816532 1144.5535699358602 53.929 2 -0.8271894903216247 0.25555396916047973 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 131677 15764 VTMPNVARQTL True PC9_epitope_Rep6 1228.6597919401997 1228.6581449037901 72.877 3 -0.8272116482885897 0.25555396916047973 1.0 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 37732 5825 GWGHFAGG True NCI_RA007_Epitope_Rep2 787.3401720719899 787.33906993586 27.276 2 -0.8272320398307997 0.25555396916047973 1.0 ['ENST00000220244.7_1_15:81242120-81242198:+|nuORF'] 19731 5443 ELRRRDTFYKE True H1975_Epitope_Rep1 1511.78447485935 1511.78281490379 25.995 3 -0.8272496860578396 0.25555396916047973 1.0 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 81340 17121 PLASLQYP True PC9_epitope_Rep1 887.4752685624701 887.47416993586 70.68 2 -0.8272770883430831 0.25555396916047973 1.0 ['ENST00000428216.3_1_20:3838298-3838403:+|nuORF'] 137985 23816 YFPQILRFLRP True PC9_epitope_Rep1 1448.8292402237998 1448.8286749679298 96.405 1 -0.827314396186018 0.25556459787838554 1.0 ['nc|ENSG00000165511|Q5T742|ZNF22-AS1'] 70245 6971 LVRENRKYYMD True NCI_RA007_Epitope_Rep2 1485.73983316605 1485.7381949037901 31.737 3 -0.8273397877266435 0.2556001313478863 1.0 ['ENSG00000185129|ENST00000331327|PURA'] 34114 8160 GMGFICGF True NCI_RA007_Epitope_Rep4 830.3455173462199 830.34440993586 38.176 2 -0.8273566602347507 0.2556001313478863 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 19561 5683 ELQEGPEKP True NCI_RA007_Epitope_Rep2 1025.5029398622898 1025.50184993586 26.719 2 -0.8273627584932626 0.2556107589515162 1.0 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'DOK2|p.D205Tfs*3|1|0.4|ENSG00000147443|chr8:21910678-21910678|C/-|frameshift_variant', 'DOK2|p.A237Pfs*167|1|0.21|ENSG00000147443|chr8:21909829-21909841|CCTCTTCCAGGGC/-|frameshift_variant', 'ENSG00000147443|ENST00000276420|DOK2'] 2976 7926 AFGEPETDRTL True H1975_Epitope_Rep1 1234.5829810881398 1234.58188993586 35.438 2 -0.8274431572646928 0.255621065254322 1.0 ['ENST00000594345.5_1_19:17447582-17447759:+|nuORF'] 88314 13777 QSFRRKKDVYV True H1975_Epitope_Rep3 1424.7888319638 1424.7877299358602 58.295 2 -0.8274497940031198 0.255621065254322 1.0 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB', 'ENST00000554315.5_1_14:73753704-73876743:-|nuORF'] 69853 11394 LVHISELAAL True PC9_epitope_Rep6 1064.62299542532 1064.62188993586 54.881 2 -0.8274562946945306 0.255621065254322 1.0 ['PER3|p.Q150L|1|0.15|ENSG00000049246|chr1:7788103-7788103|A/T|missense_variant'] 138073 12415 YGETWHKGGIL True PC9_epitope_Rep6 1259.6298717109098 1259.6287699358602 59.182 2 -0.8275014564039509 0.255621065254322 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 126647 19866 VLNRCSEINK True PC9_epitope_Rep3 1174.61284174778 1174.6117499358602 81.651 2 -0.8275088593708999 0.255621065254322 1.0 ['ENSG00000156017|ENST00000376834|CARNMT1'] 137386 23031 YDVKPLLEL True PC9_epitope_Rep3 1088.61176203528 1088.6106699358602 93.857 2 -0.8275553241108476 0.2556602426837973 1.0 ['OR12D3|p.F256Lfs*10|1|0.18|ENSG00000112462|chr6:29374514-29374520|ATATGTG/-|frameshift_variant', 'ENSG00000112462|ENST00000396806|OR12D3'] 68883 9830 LTNFKLGP True NCI_RA007_Epitope_Rep5 888.5069030439199 888.50580993586 44.456 2 -0.827594399991842 0.2556708683673324 1.0 ['chr7:106830210-106831993|230|10.42|0.04|8.07|+|2|LINC02577,LINC02577|1'] 62086 9135 LLDYEESRFYL True H1975_Epitope_Rep1 1446.70309622082 1446.7019899358602 40.044 2 -0.8276527562655597 0.2556778439181762 1.0 ['PCDHGA5|p.S306L|1|0.15|ENSG00000253485|chr5:141365247-141365247|C/T|missense_variant'] 59920 8577 LGGNVTRPWW True H1975_Epitope_Rep3 1184.60907669668 1184.6079699358602 37.982 2 -0.8276540085300552 0.2556778439181762 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 129564 17534 VRLPRPRR True NCI_RA007_Epitope_Rep4 1048.67301436592 1048.6719099358602 75.892 2 -0.8276810551253445 0.2556884688954235 1.0 ['ENST00000244745.3_2_6:21597104-21597149:+|nuORF'] 129937 12190 VRVASPSL True PC9_epitope_Rep3 827.4865019525099 827.48540993586 51.922 2 -0.8277079826879877 0.25569544364508395 1.0 ['nc|ENSG00000134575|P11117-2|ACP2', 'ENST00000444355.5_1_11:47267202-47270343:-|nuORF'] 129949 23917 VRVGALLL True NCI_RA007_Epitope_Rep4 839.5592729699499 839.5587249679301 103.73 1 -0.8277145562208826 0.25569544364508395 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 120294 13463 VEDLVFWVP True PC9_epitope_Rep1 1102.5698972233 1102.5688099358601 56.643 2 -0.8278290569077322 0.2558059865538062 1.0 ['chr7:65940167-65948671|129|14.83|0.51|4.88|+|2|TE_info:AluJr,AluJr_dup31264,Alu,SINE,donor,-,65940017,65940167|None,VKORC1L1|2'] 135147 16779 WELEFYLWKI True NCI_RA007_Epitope_Rep2 1425.7332741502898 1425.7321699358602 70.001 2 -0.8278523869149429 0.25581627701178955 1.0 ['ENST00000415328.1_1_3:57516074-57516185:-|nuORF'] 30660 6795 GALAALASL True H1975_Epitope_Rep2 785.46470387877 785.46360993586 31.052 2 -0.8278799969528945 0.25581627701178955 1.0 ['ENST00000377834.8_1_1:6478873-6479209:-|nuORF'] 123546 14448 VGPPSPFP True PC9_epitope_Rep3 796.41194002992 796.41084993586 60.679 2 -0.8278865759667464 0.25581627701178955 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'ENST00000607632.1_1_1:2985775-3103053:+|nuORF'] 88093 17581 QRRRIHSG True NCI_RA007_Epitope_Rep5 1008.5689432201998 1008.56784993586 74.407 2 -0.8279018239629617 0.25581627701178955 1.0 ['ENST00000399604.4_1_17:5084193-5085186:-|nuORF'] 17040 7539 EGENRRREWKE True NCI_RA007_Epitope_Rep2 1487.72293723195 1487.72128490379 33.951 3 -0.8279058017251474 0.25581627701178955 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2', 'ENST00000505524.1_1_5:36108630-36114563:-|nuORF'] 52856 18536 KPDIDAWEL True PC9_epitope_Rep4 1085.53932537101 1085.53822993586 79.373 2 -0.827933168709946 0.255837519981731 1.0 ['ENSG00000178741|ENST00000322347|COX5A'] 14109 3915 DSALITLEDP True H1975_Epitope_Rep3 1072.52882025696 1072.5277299358602 20.18 2 -0.8279463942500304 0.255837519981731 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 11386 5421 DERRTVIIHDR True PC9_epitope_Rep1 1408.7535090842398 1408.7518649037902 25.685 3 -0.8280032198810637 0.2558481410119175 1.0 ['ENSG00000137776|ENST00000380516|SLTM', 'nc|ENSG00000137776|Q9NWH9-3|SLTM'] 68004 8746 LTDGIWSQIK True H1975_Epitope_Rep1 1159.62372370131 1159.62262993586 38.572 2 -0.8280109337826135 0.25587303399651756 1.0 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 2026 9996 AEKKFKEV True H1975_Epitope_Rep2 977.5545815123298 977.55348993586 43.44 2 -0.8280445275430033 0.2558836542166783 1.0 ['ENST00000477917.5_1_2:220144555-220145531:+|nuORF', 'ENST00000485220.1_1_2:220144701-220145531:+|nuORF', 'ENST00000480537.5_1_2:220144555-220146923:+|nuORF', 'nc|ENSG00000135924|P25686-2|DNAJB2', 'ENSG00000135924|ENST00000336576|DNAJB2'] 65550 27197 LRRRKRRRIA True PC9_epitope_Rep5 1379.91743557827 1379.91580490379 111.41 3 -0.8281181134460136 0.2559048937475917 1.0 ['ENST00000496567.5_1_9:97782205-97782394:+|nuORF'] 64662 18478 LPVDVQNGFI True H1975_Epitope_Rep1 1100.5866099165999 1100.58550993586 77.03 2 -0.8281412200544627 0.2559048937475917 1.0 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF'] 17724 4770 EHQIAVQYLQM True H1975_Epitope_Rep3 1358.66527124346 1358.66362490379 23.474 3 -0.8281928208129271 0.2559224797351296 1.0 ['nc|ENSG00000148737|Q9NQB0-9|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-4|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-6|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-2|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-7|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-5|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-3|TCF7L2', 'ENSG00000148737|ENST00000355995|TCF7L2'] 28785 19697 FSTRKNSMGI True PC9_epitope_Rep3 1139.57572796307 1139.57462993586 80.995 2 -0.8281956637254039 0.2559224797351296 1.0 ['ENSG00000085788|ENST00000397166|DDHD2', 'nc|ENSG00000085788|O94830-2|DDHD2'] 16152 5734 EEDFEDDDEWE True H1975_Epitope_Rep1 1456.4790290817198 1456.4779299358602 27.125 2 -0.8282110638662757 0.2559224797351296 1.0 ['ENSG00000106299|ENST00000223023|WASL'] 20436 20423 EPFYEQLP True PC9_epitope_Rep3 1021.4756624852898 1021.47456993586 83.81 2 -0.8282567766479892 0.25593309834030226 1.0 ['GCM1|p.Q339E|1|0.17|ENSG00000137270|chr6:53128502-53128502|G/C|missense_variant'] 122480 15791 VGEGLLLK True PC9_epitope_Rep3 827.5116540711899 827.51054993586 65.896 2 -0.8283117288337689 0.2559722578987927 1.0 ['ENST00000488234.1_1_2:84660404-84668204:-|nuORF'] 125539 23929 VKHLKKKLK True NCI_RA007_Epitope_Rep3 1120.7808334793997 1120.7797299358601 103.67 2 -0.8283283510348525 0.2559898397477061 1.0 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5'] 122298 8046 VGAVVLYA True NCI_RA007_Epitope_Rep5 790.4588902223398 790.45778993586 37.638 2 -0.82833094924266 0.2559898397477061 1.0 ['ENST00000272233.5_1_2:20646849-20646981:+|nuORF'] 80662 5647 PGSYKVEMAR True NCI_RA007_Epitope_Rep4 1136.5648289261997 1136.56372993586 28.326 2 -0.8283325496608842 0.2559898397477061 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 121890 8585 VFPSIVGRPR True NCI_RA007_Epitope_Rep2 1126.6611122695397 1126.65946490379 38.037 3 -0.8283932266984705 0.25600045663403637 1.0 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTA1|p.H42L|1|0.34|ENSG00000143632|chr1:229432991-229432991|T/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 83789 11991 PVKRTEAP True PC9_epitope_Rep1 896.5079656730799 896.50686993586 50.986 2 -0.8284574482131406 0.2560074200913242 1.0 ['ENSG00000114166|ENST00000263754|KAT2B', 'ENST00000468400.1_1_3:20189792-20189999:+|nuORF'] 102376 19454 SLTEMPRI True PC9_epitope_Rep2 945.49535238405 945.49424993586 80.211 2 -0.8284629487387156 0.2560074200913242 1.0 ['ENST00000521922.5_1_8:103341385-103341578:-|nuORF'] 67295 13747 LSRWHELRRFW True H1975_Epitope_Rep3 1584.8425988721597 1584.8415099358601 58.175 2 -0.828510940883331 0.2560249989298403 1.0 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 116165 7682 TSTVEITWD True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 34.501 2 -0.8285426404574071 0.2560249989298403 1.0 ['ENSG00000089048|ENST00000617257|ESF1'] 59392 22339 LFLLPPIILD True PC9_epitope_Rep4 1152.7158331809999 1152.71472993586 94.164 2 -0.8285469968806581 0.2560249989298403 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 18419 8732 EIWEKTM[Oxidation]WPPT True H1975_Epitope_Rep3 1432.6696882979998 1432.6685899358602 38.591 2 -0.8286178538546283 0.25609199338012895 1.0 ['ENST00000306562.7_1_1:249142917-249143094:+|nuORF'] 98558 12891 SFQFRSRPVAL True PC9_epitope_Rep1 1306.7146043943799 1306.71295490379 54.459 3 -0.8286272896483743 0.25609199338012895 1.0 ['ENST00000522387.5_1_8:101733807-101733969:-|nuORF'] 54205 8179 KVVHFIYI True NCI_RA007_Epitope_Rep4 1017.60113778193 1017.6000499358599 38.249 2 -0.8286437775242832 0.25609199338012895 1.0 ['ENSG00000079557|ENST00000226355|AFM'] 22801 2632 EVAAVAVLMC True PC9_epitope_Rep2 1004.5034745395999 1004.5029749679301 14.773 1 -0.828681555767146 0.25609199338012895 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 106762 3902 STYTIEWYQQR True NCI_RA007_Epitope_Rep4 1473.6888431390098 1473.68719490379 21.234 3 -0.8286855916568083 0.25609199338012895 1.0 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 2447 9343 AEQKKWEEQHE True H1975_Epitope_Rep3 1440.66335666716 1440.66224993586 40.937 2 -0.8286883645361001 0.25609199338012895 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 116417 16026 TTISRFEAL True PC9_epitope_Rep1 1036.5553097883198 1036.5542099358602 66.456 2 -0.8286998264773933 0.25609199338012895 1.0 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000028277|P09086-4|POU2F2', 'POU2F3|p.Q226H|1|0.18|ENSG00000137709|chr11:120305694-120305694|G/T|missense_variant', 'ENST00000559648.1_1_1:167358914-167365774:+|nuORF', 'nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'ENST00000533620.5_1_11:120169092-120189098:+|nuORF'] 72532 17072 MLKKQRWVKKN True NCI_RA007_Epitope_Rep3 1457.8653084626897 1457.86366490379 75.019 3 -0.8287126162697478 0.25609199338012895 1.0 ['ENST00000368886.9_1_10:124758104-124758158:-|nuORF'] 102077 8705 SLREMEEGP True PC9_epitope_Rep1 1046.47025983502 1046.46916993586 38.323 2 -0.8287467363328983 0.25609199338012895 1.0 ['ENSG00000144644|ENST00000282538|GADL1'] 57303 5969 LEAAGDKF True PC9_epitope_Rep4 849.42323298961 849.42212993586 29.906 2 -0.8287555003990915 0.2561168732969055 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 111706 8303 TIFYTTDAV True H1975_Epitope_Rep1 1029.5018772331298 1029.5007899358602 36.869 2 -0.8287890845578909 0.256127485947442 1.0 ['TKTL1|p.P422T|1|0.19|ENSG00000007350|chrX:154323284-154323284|C/A|missense_variant'] 12885 11899 DLIMWKMLK True NCI_RA007_Epitope_Rep1 1176.63990844276 1176.63826490379 50.267 3 -0.8288928938245541 0.25613444419082404 1.0 ['ENST00000602629.1_1_2:171073857-171238605:+|nuORF'] 19152 9409 ELHGRMISVEK True H1975_Epitope_Rep1 1297.68125566077 1297.68014993586 41.104 2 -0.8289001859269022 0.25613444419082404 1.0 ['SAFB2-LONP1|1|fusion', 'ENSG00000130254|ENST00000252542|SAFB2'] 136303 13860 WSPNWFWRRPV True H1975_Epitope_Rep3 1529.76803694957 1529.76640490379 58.621 3 -0.8289245568376401 0.25614140203714797 1.0 ['nc|ENSG00000204544|Q5SSG8-3|MUC21', 'ENSG00000204544|ENST00000376296|MUC21', 'nc|ENSG00000204544|Q5SSG8-2|MUC21'] 70552 13280 LVYVPSASLF True NCI_RA007_Epitope_Rep4 1094.60119735158 1094.60010993586 58.218 2 -0.828925867305472 0.25614140203714797 1.0 ['nc|ENSG00000165891|Q96AV8-2|E2F7', 'nc|ENSG00000165891|Q96AV8-3|E2F7', 'ENSG00000165891|ENST00000322886|E2F7'] 74228 5455 NEIDAEPP True H1975_Epitope_Rep3 883.39232678415 883.39122993586 26.038 2 -0.828961874276235 0.25614835948644793 1.0 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 61778 6497 LLALHSAA True PC9_epitope_Rep5 794.4650382319401 794.46394993586 29.963 2 -0.8289665580068291 0.25614835948644793 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 60832 2812 LHTVLWDGESR True NCI_RA007_Epitope_Rep1 1311.6571490879098 1311.6555149037902 14.776 3 -0.8289919547792596 0.25623029628678623 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000502799.1_1_4:843463-843892:-|nuORF'] 112428 12512 TLDASQSS True H1975_Epitope_Rep1 807.3610266558701 807.36047496793 53.168 1 -0.829053614192797 0.2562837008929845 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113943320-113958989:+|nuORF', 'ENST00000409656.5_1_2:113943320-113958989:+|nuORF'] 102493 5673 SLVIQKAAI True NCI_RA007_Epitope_Rep5 941.5909670210499 941.58986993586 28.51 2 -0.8290670497260981 0.25629430980129236 1.0 ['CON__ENSEMBL:ENSBTAP00000032840'] 45725 14151 IRSDLKAEA True PC9_epitope_Rep2 1001.55055876105 1001.5499749679301 59.702 1 -0.8290942753864965 0.25630491840693825 1.0 ['ENSG00000104442|ENST00000276569|ARMC1', 'nc|ENSG00000104442|Q9NVT9-2|ARMC1', 'ARMC1|p.A197del|1|0.29|ENSG00000104442|chr8:65605329-65605331|TGC/-|inframe_deletion', 'ARMC1|p.A197S|1|0.22|ENSG00000104442|chr8:65605331-65605331|C/A|missense_variant'] 66980 12003 LSPEQTVGL True H1975_Epitope_Rep3 942.5022115862998 942.50110993586 51.329 2 -0.8291139213378999 0.25631552670993507 1.0 ['ENST00000433126.1_1_20:61294700-61296403:-|nuORF', 'ENST00000451648.1_1_20:61294700-61297915:-|nuORF', 'ENST00000411824.1_1_20:61294700-61297915:-|nuORF'] 66669 13573 LSKVEKARQ True PC9_epitope_Rep2 1057.6243924076498 1057.6232899358602 57.501 2 -0.8291318078520001 0.25633674240803345 1.0 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 16473 12268 EELLHFIWEQK True H1975_Epitope_Rep3 1470.7507151195798 1470.74960993586 52.367 2 -0.8291357426684731 0.25633674240803345 1.0 ['ENST00000534336.1_1_11:65270530-65270659:+|nuORF'] 122840 4389 VGGVEREQRGV True NCI_RA007_Epitope_Rep3 1184.6261833127999 1184.6245349037902 24.039 3 -0.8292168835738375 0.25636820035941466 1.0 ['ENST00000536214.1_2_17:656373-656511:+|nuORF'] 22711 8228 ETRYRQRYLDL True H1975_Epitope_Rep1 1511.7844748593498 1511.78281490379 36.592 3 -0.8292240887524805 0.25636820035941466 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 137619 6406 YEFTFRRFFDD True H1975_Epitope_Rep3 1541.6939285194496 1541.6928299358601 29.618 2 -0.8292458362619709 0.25636820035941466 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENSG00000150457|ENST00000382592|LATS2'] 131801 18181 VTQFSRCLL True PC9_epitope_Rep2 1065.5641006502099 1065.56300993586 75.239 2 -0.8292492704253667 0.25636820035941466 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|243|1|anti-sense'] 117616 16382 TVTEITLI True PC9_epitope_Rep2 888.5167990212799 888.51570993586 68.26 2 -0.8292493383927162 0.25636820035941466 1.0 ['ENSG00000196099|ENST00000309154|OR6M1', 'OR6M1|p.S5G|1|0.06|ENSG00000196099|chr11:123806337-123806337|T/C|missense_variant'] 102397 8471 SLTHYILDTR True NCI_RA007_Epitope_Rep1 1217.6404363946099 1217.6393299358601 36.949 2 -0.8292627418346177 0.25636820035941466 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 57090 11519 LDSMRELPPLS True NCI_RA007_Epitope_Rep1 1256.64347316972 1256.6423699358602 48.774 2 -0.8292659645388479 0.25636820035941466 1.0 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 13592 18975 DPFSRHRVWS True PC9_epitope_Rep6 1285.6316030464097 1285.6305099358601 85.632 2 -0.8293169813762699 0.25637149336109644 1.0 ['nc|ENSG00000154263|Q8WWZ4-2|ABCA10', 'ENSG00000154263|ENST00000690296|ABCA10'] 56549 11903 LDGNLIIRYDV True H1975_Epitope_Rep2 1289.69795127073 1289.6968499358602 50.865 2 -0.829355031395283 0.25637149336109644 1.0 ['ENST00000468472.1_1_3:52853923-52864679:-|nuORF', 'nc|ENSG00000055955|Q14624-4|ITIH4', 'nc|ENSG00000055955|Q14624-3|ITIH4', 'nc|ENSG00000055955|Q14624-2|ITIH4', 'ENSG00000055955|ENST00000266041|ITIH4'] 4175 9219 AHVLELTAEI True H1975_Epitope_Rep1 1094.5971746003001 1094.5960699358602 40.37 2 -0.8294369795755019 0.25637149336109644 1.0 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 75638 15337 NLEIIDLYRKK True H1975_Epitope_Rep1 1403.8136497293096 1403.81254993586 64.263 2 -0.8294719256715744 0.2563820987478251 1.0 ['ENST00000573577.5_1_17:5336118-5336172:+|nuORF'] 79449 8580 PAVHFING True PC9_epitope_Rep5 853.44463714053 853.44354993586 37.944 2 -0.8295243676846139 0.25638539096704266 1.0 ['SWT1|p.D455G|1|0.2|ENSG00000116668|chr1:185184866-185184866|A/G|missense_variant'] 41152 3490 HVDRRFGWDCH True NCI_RA007_Epitope_Rep2 1426.63128577658 1426.62964490379 18.228 3 -0.8295261963384829 0.25638539096704266 1.0 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 117467 7126 TVQVLSPR True NCI_RA007_Epitope_Rep5 898.5236157372199 898.52250993586 34.089 2 -0.8295371176611306 0.25638539096704266 1.0 ['ADAMTSL3|p.V1522L|1|0.31|ENSG00000156218|chr15:84025344-84025344|G/T|missense_variant'] 117430 8398 TVQAECPMHL True PC9_epitope_Rep4 1127.51035082519 1127.5087049037902 39.766 3 -0.8295508711262592 0.25639599555061177 1.0 ['ENSG00000151834|ENST00000381620|GABRA2', 'nc|ENSG00000151834|P47869-2|GABRA2'] 126891 17830 VLQPHENIV True PC9_epitope_Rep1 1047.57129420563 1047.57018993586 73.376 2 -0.8295940931145139 0.2564705882352941 1.0 ['ENSG00000169554|ENST00000627532|ZEB2', 'nc|ENSG00000169554|O60315-2|ZEB2', 'ZEB2|p.P893Lfs*37|1|0.21|ENSG00000169554|chr2:144398509-144398509|G/-|frameshift_variant'] 3477 16363 AGLFFFFFF True PC9_epitope_Rep5 1141.5636896440499 1141.5625899358602 67.938 2 -0.8296051127114309 0.2564705882352941 1.0 ['ENST00000237380.11_1_4:17628433-17628604:+|nuORF'] 67454 14365 LSSRLRLDPV True H1975_Epitope_Rep1 1154.6771562565 1154.6760499358602 60.448 2 -0.8296611546470746 0.2564705882352941 1.0 ['ENSG00000158008|ENST00000374280|EXTL1'] 115656 13125 TRWRFKAP True NCI_RA007_Epitope_Rep3 1060.5930327097199 1060.5919299358602 58.904 2 -0.8296706862754682 0.25647387634040614 1.0 ['ENST00000430644.5_1_4:728709-759864:+|nuORF'] 85491 5074 QFQGDADDLK True PC9_epitope_Rep1 1135.5145671751498 1135.51346993586 24.373 2 -0.829685862545436 0.25647387634040614 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 21926 5543 ESDTLSGSQSP True H1975_Epitope_Rep3 1106.47276193282 1106.47166993586 26.37 2 -0.8296861734797839 0.25647387634040614 1.0 ['ENSG00000101577|ENST00000677752|LPIN2'] 112860 7527 TLKGKTNGADP True NCI_RA007_Epitope_Rep2 1100.5825871653199 1100.5814899358602 33.904 2 -0.8297926747043092 0.256484478603716 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP'] 123064 7921 VGKEFEED True PC9_epitope_Rep3 951.4185415319898 951.41744993586 35.448 2 -0.8298671366232226 0.2565126260105799 1.0 ['nc|ENSG00000114115|P09455|RBP1', 'nc|ENSG00000114115|P09455-2|RBP1', 'nc|ENSG00000114115|P09455-3|RBP1', 'ENSG00000114115|ENST00000672186|RBP1'] 129804 16307 VRRLPGGG True H1975_Epitope_Rep3 810.4824196315798 810.48132993586 68.199 2 -0.8298960969218568 0.2565126260105799 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 9583 19205 AYAAIMEEDD True PC9_epitope_Rep1 1126.4488556841 1126.4477499358602 78.667 2 -0.8299012459192618 0.2565126260105799 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENST00000555962.5_1_14:21868424-21899982:-|nuORF'] 15898 15527 EDKKVRVQ True NCI_RA007_Epitope_Rep4 1000.5665431783598 1000.56544993586 67.438 2 -0.8299101261393365 0.2565126260105799 1.0 ['nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14', 'CDK14|p.E170Kfs*16|1|0.71|ENSG00000058091|chr7:90790615-90790615|G/-|frameshift_variant'] 57301 7079 LEAAGDKF True PC9_epitope_Rep3 849.42323298961 849.42212993586 32.238 2 -0.8299439818946026 0.25652322696552315 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 83688 14285 PVFCMPEEVL True PC9_epitope_Rep4 1162.54025397114 1162.53914993586 62.848 2 -0.8299571597363762 0.256530169955515 1.0 ['ENSG00000137955|ENST00000319942|RABGGTB'] 133185 20224 VVRRPPIHRR True NCI_RA007_Epitope_Rep2 1284.8003401373599 1284.7987049037902 83.698 3 -0.8299707659458182 0.256530169955515 1.0 ['ENSG00000170776|ENST00000394518|AKAP13', 'AKAP13|p.S1795Qfs*12|1|0.29|ENSG00000170776|chr15:85693365-85693366|-/T|frameshift_variant'] 14880 9632 DWLVDRRHCSL True H1975_Epitope_Rep3 1398.6826526431 1398.6815499358602 42.065 2 -0.8299836661543735 0.2565407702068808 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'ENST00000579853.5_1_17:46048512-46051060:+|nuORF', 'ENST00000581708.5_1_17:46048512-46051791:+|nuORF', 'ENST00000584063.5_1_17:46048512-46051888:+|nuORF', 'ENST00000584525.5_1_17:46048512-46051498:+|nuORF', 'ENST00000583182.5_1_17:46048501-46051888:+|nuORF'] 117004 13169 TVHEGKVVV True PC9_epitope_Rep5 966.5498304850598 966.54872993586 55.659 2 -0.8300288156296105 0.2565477123996635 1.0 ['PCOLCE2|p.P66H|1|0.26|ENSG00000163710|chr3:142848468-142848468|G/T|missense_variant'] 58857 9355 LESVNDAQKAK True NCI_RA007_Epitope_Rep5 1201.63026563373 1201.62916993586 42.626 2 -0.8300754217877404 0.2565477123996635 1.0 ['ENST00000440689.1_1_1:111494904-111495009:+|nuORF'] 3617 16319 AGPELQLLS True PC9_epitope_Rep1 926.5072969667399 926.50618993586 67.589 2 -0.8301632689705919 0.2565937669299421 1.0 ['nc|ENSG00000177614|Q8N414-2|PGBD5'] 59262 12314 LFFNWKQEFR True H1975_Epitope_Rep3 1413.7193554216499 1413.71824993586 52.549 2 -0.8301637205429396 0.2565937669299421 1.0 ['ENSG00000091106|ENST00000402280|NLRC4'] 57698 11189 LEEIYELHAMP True NCI_RA007_Epitope_Rep2 1343.64313881655 1343.64204993586 48.105 2 -0.8301688507393061 0.2565937669299421 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1'] 38650 20074 HFMVVILL True H1975_Epitope_Rep2 970.5673951254998 970.56628993586 83.194 2 -0.830184517924078 0.25660436536789133 1.0 ['nc|ENSG00000251608|P0DN82|OR12D1'] 19479 9490 ELNTMYLR True H1975_Epitope_Rep3 1038.51681610462 1038.51570993586 41.508 2 -0.8302197007344212 0.2566398175208497 1.0 ['ENST00000560108.5_2_15:34455854-34470059:-|nuORF'] 32706 4912 GGTKGKKR True H1975_Epitope_Rep1 830.50863437942 830.50752993586 23.97 2 -0.8302453700433527 0.2566398175208497 1.0 ['ZNF598|p.E88Kfs*204|1|0.2|ENSG00000167962|chr16:2003029-2003030|-/TT|frameshift_variant', 'ENST00000563630.5_2_16:2051172-2051695:-|nuORF'] 42415 9950 IEDLPGKMDT True PC9_epitope_Rep2 1117.53252573841 1117.5314299358602 43.601 2 -0.8303104964770076 0.2566427186680351 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ENSG00000125257|ENST00000645237|ABCC4'] 36201 15656 GVCGRFLSSTV True PC9_epitope_Rep2 1124.5648289261999 1124.56372993586 65.496 2 -0.8303128958356871 0.2566427186680351 1.0 ['TREML1|p.R203T|1|0.38|ENSG00000161911|chr6:41150274-41150274|C/G|missense_variant'] 16374 5837 EEIQEVRSKSD True NCI_RA007_Epitope_Rep2 1318.6364732129798 1318.6353699358601 27.323 2 -0.830362397458818 0.2566427186680351 1.0 ['nc|ENSG00000131828|P08559-3|PDHA1', 'ENSG00000131828|ENST00000422285|PDHA1', 'nc|ENSG00000131828|P08559-2|PDHA1', 'nc|ENSG00000131828|P08559-4|PDHA1'] 122486 9858 VGEIVCETPFR True H1975_Epitope_Rep1 1248.61725842188 1248.6161699358602 42.851 2 -0.830365295712062 0.2566427186680351 1.0 ['ENSG00000185985|ENST00000335565|SLITRK2', 'SLITRK2|p.M307*|1|0.23|ENSG00000185985|chrX:145823341-145823341|A/-|frameshift_variant', 'nc|ENSG00000185985|Q9H156-2|SLITRK2'] 28782 16252 FSTKVPTF True NCI_RA007_Epitope_Rep3 925.4909186266099 925.48982993586 71.615 2 -0.830368303586228 0.2566427186680351 1.0 ['ENSG00000173662|ENST00000333172|TAS1R1', 'nc|ENSG00000173662|Q7RTX1-2|TAS1R1'] 58418 6829 LENVQTFPSP True NCI_RA007_Epitope_Rep2 1130.5607890915799 1130.5596899358602 31.179 2 -0.8303750242962369 0.2566427186680351 1.0 ['SCG2|p.K49T|1|0.1|ENSG00000171951|chr2:223599137-223599137|T/G|missense_variant'] 137695 21269 YEKKPKKQKRR True NCI_RA007_Epitope_Rep2 1487.9048647755496 1487.90320490379 87.99 3 -0.8304372834477923 0.2566427186680351 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 70631 25106 LWHIWRERN True NCI_RA007_Epitope_Rep3 1308.68397297244 1308.68233490379 108.51 3 -0.8304727505336871 0.25666756945533337 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 132460 15179 VVDEIDSI True H1975_Epitope_Rep3 888.44402800384 888.44292993586 63.789 2 -0.8305254026907214 0.2566924195341677 1.0 ['ENSG00000133028|ENST00000255390|SCO1'] 85759 6950 QHDKLNLGPAI True H1975_Epitope_Rep2 1204.6564208119198 1204.6553299358602 31.653 2 -0.8305589923584757 0.2567030147530468 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 63361 10789 LLTSSNPP True PC9_epitope_Rep2 827.43888305375 827.43778993586 46.817 2 -0.830577049894042 0.25671360966987855 1.0 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'nc|ENSG00000203993|Q9H2J1|ARRDC1-AS1', 'ENST00000371417.3_1_9:140510123-140512388:-|nuORF'] 42149 17504 IDPDAATCET True H1975_Epitope_Rep1 1034.42264093626 1034.42207496793 72.825 1 -0.83063869523211 0.25673479859745146 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'ENST00000419548.4_1_20:3669209-3669317:-|nuORF'] 3465 19032 AGLDGALLVA True PC9_epitope_Rep3 898.5123823471799 898.51128993586 78.426 2 -0.8306549878164363 0.25673479859745146 1.0 ['ENSG00000235098|ENST00000537107|ANKRD65'] 106530 9374 STLPKSLSL True PC9_epitope_Rep6 944.55424715916 944.55314993586 46.251 2 -0.8306747327603976 0.2567413488398609 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 113392 9759 TLSAWKVKQDP True NCI_RA007_Epitope_Rep1 1271.6873865870298 1271.68628993586 41.962 2 -0.8306859300943191 0.2567413488398609 1.0 ['CENPI|p.E326Rfs*2|1|0.19|ENSG00000102384|chrX:101127560-101127560|A/-|frameshift_variant', 'nc|ENSG00000102384|Q92674-2|CENPI', 'ENSG00000102384|ENST00000682095|CENPI'] 120074 18021 VDTRLRAL True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 76.117 2 -0.830707797448258 0.2567413488398609 1.0 ['ENSG00000251692|ENST00000447419|PTX4', 'nc|ENSG00000251692|Q96A99-2|PTX4'] 18715 10556 ELAMFVQLL True PC9_epitope_Rep3 1062.5783537320199 1062.5772499358602 45.551 2 -0.830722392996362 0.2567413488398609 1.0 ['nc|ENSG00000124091|Q6ZNI0|GCNT7'] 55781 11370 LAMWKKLAEWP True PC9_epitope_Rep1 1371.7373139849099 1371.7362099358602 48.615 2 -0.830811026822392 0.2567413488398609 1.0 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 115509 13755 TRRPPATA True NCI_RA007_Epitope_Rep3 868.4878989348399 868.48680993586 61.43 2 -0.830840607383276 0.2567413488398609 1.0 ['CLEC14A|p.P315Rfs*26|1|0.14|ENSG00000176435|chr14:38255079-38255079|G/-|frameshift_variant', 'CLEC14A|p.P441Rfs*24|1|0.17|ENSG00000176435|chr14:38254703-38254703|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 58243 14519 LELLMSSKMA True PC9_epitope_Rep5 1121.5824531362903 1121.58134993586 60.846 2 -0.8309104297148469 0.25676619397135325 1.0 ['ENST00000467530.5_1_1:85960653-85960731:-|nuORF'] 132506 26442 VVDNGGLACT True H1975_Epitope_Rep2 947.43823143075 947.4376849679301 108.84 1 -0.8309615468499768 0.25680124267859944 1.0 ['OR4A47|p.A199D|1|0.24|ENSG00000237388|chr11:48489388-48489388|C/A|missense_variant'] 19991 16112 ELWRQRQEWQE True H1975_Epitope_Rep1 1586.7589883874996 1586.75788993586 67.319 2 -0.8309626194789008 0.25680124267859944 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 56118 11864 LAVCHGSS True PC9_epitope_Rep3 772.3537735308 772.35266993586 50.653 2 -0.830998011111714 0.25680124267859944 1.0 ['ENSG00000148513|ENST00000361713|ANKRD30A', 'ANKRD30A|p.E356Kfs*41|1|0.19|ENSG00000148513|chr10:37141963-37141963|G/-|frameshift_variant', 'ANKRD30A|p.F642Sfs*18|1|0.28|ENSG00000148513|chr10:37162670-37162670|C/-|frameshift_variant', 'ANKRD30A|p.I220M|1|0.21|ENSG00000148513|chr10:37133958-37133958|A/G|missense_variant'] 121886 16235 VFPRALWEL True PC9_epitope_Rep1 1129.6284151589298 1129.62676490379 67.265 3 -0.8310253682336287 0.25680124267859944 1.0 ['FAM53A|p.R387L|1|0.31|ENSG00000174137|chr4:1641330-1641330|C/A|missense_variant'] 61332 20734 LIRTRSTA True PC9_epitope_Rep6 916.54541381096 916.54430993586 92.514 2 -0.8310344891878937 0.25680124267859944 1.0 ['PPP1R3A|p.R336I|1|0.17|ENSG00000154415|chr7:113880085-113880085|C/A|missense_variant', 'PPP1R3A|p.H326N|1|0.29|ENSG00000154415|chr7:113880116-113880116|G/T|missense_variant', 'PPP1R3A|p.G962Vfs*21|1|0.09|ENSG00000154415|chr7:113878207-113878207|C/-|frameshift_variant', 'ENSG00000154415|ENST00000284601|PPP1R3A'] 113245 9729 TLRAESINERT True H1975_Epitope_Rep3 1288.67352742804 1288.67242993586 42.443 2 -0.8310388359136047 0.25680124267859944 1.0 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant'] 42566 10419 IEFGYWRRFQ True NCI_RA007_Epitope_Rep1 1400.69895433024 1400.6978499358602 44.511 2 -0.8311049091398867 0.25683667507445884 1.0 ['ENST00000450453.6_2_1:163292714-163292795:+|nuORF'] 38659 3182 HFQPLPRWEHN True PC9_epitope_Rep1 1459.7109159962697 1459.70926490379 17.109 3 -0.8311088498836338 0.25683667507445884 1.0 ['ADAMTSL3|p.W763Lfs*4|1|0.29|ENSG00000156218|chr15:83942764-83942765|-/T|frameshift_variant', 'ADAMTSL3|p.V930*|1|0.22|ENSG00000156218|chr15:83982414-83982414|C/-|frameshift_variant', 'ADAMTSL3|p.T1408Nfs*4|1|0.19|ENSG00000156218|chr15:84016446-84016447|-/A|frameshift_variant', 'ENST00000561483.5_1_15:84323016-84694242:+|nuORF', 'nc|ENSG00000156218|P82987-2|ADAMTSL3', 'ENSG00000156218|ENST00000286744|ADAMTSL3'] 132641 7157 VVFSEDEMKKF True NCI_RA007_Epitope_Rep1 1357.6587888806896 1357.6576899358602 31.829 2 -0.8311195676671871 0.25684726536894004 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 99442 16730 SIAIEKEKL True PC9_epitope_Rep1 1029.6070110080097 1029.6059099358602 69.179 2 -0.8311654105134816 0.2568863555397221 1.0 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-6|OSBPL6'] 20633 9600 EPVRTERRNEK True H1975_Epitope_Rep1 1412.7484237037995 1412.74732993586 41.851 2 -0.8312183429866657 0.25689328412442825 1.0 ['ENST00000428457.1_1_7:47316856-47317057:-|nuORF'] 19864 12843 ELTEVITAAEF True PC9_epitope_Rep5 1221.6128842340897 1221.61123490379 54.41 3 -0.8312671330397815 0.25689328412442825 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000472664.1_10:133757603-133758980:+|nuORF', 'ENST00000517754.1_1_8:26218621-26220417:+|nuORF', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 83249 8141 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 36.254 2 -0.8314100433466219 0.2569608709282111 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 46806 13431 ITGVISPLSA True PC9_epitope_Rep2 956.5542471591599 956.55314993586 56.944 2 -0.8314411610971701 0.25696413559225434 1.0 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 43171 15589 IFFNVSEHDY True H1975_Epitope_Rep2 1269.56660274801 1269.56494490379 65.118 3 -0.8314443421360135 0.25696413559225434 1.0 ['nc|ENSG00000182667|Q9P121-3|NTM', 'nc|ENSG00000182667|Q9P121|NTM', 'nc|ENSG00000182667|Q9P121-4|NTM', 'ENST00000474900.5_1_11:132180116-132205037:+|nuORF', 'nc|ENSG00000182667|Q9P121-2|NTM', 'ENSG00000182667|ENST00000683400|NTM'] 15932 16827 EDLRRRLKYFF True H1975_Epitope_Rep1 1541.84668119309 1541.8450349037903 70.134 3 -0.8314773242257276 0.25696413559225434 1.0 ['ENST00000596390.1_1_19:7587636-7590109:+|nuORF', 'ENST00000394321.9_1_19:7587636-7592563:+|nuORF', 'ENSG00000090674|ENST00000264079|MCOLN1'] 44428 10747 ILHDIETVF True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 49.32 2 -0.8314997735254431 0.2569747228634123 1.0 ['ENST00000216297.6_1_14:21820582-21820828:-|nuORF'] 132005 6515 VTSPVPNGT True NCI_RA007_Epitope_Rep3 870.44469671018 870.44358993586 32.667 2 -0.8315342253478492 0.2569853098328655 1.0 ['PLXNB3|p.A898V|1|0.12|ENSG00000198753|chrX:153772205-153772205|C/T|missense_variant'] 57705 12881 LEEKQQQP True H1975_Epitope_Rep2 998.5032742154599 998.50216993586 54.658 2 -0.8315627752146668 0.2570064828667094 1.0 ['ENSG00000204713|ENST00000377199|TRIM27', 'TRIM27|p.E246D|1|0.23|ENSG00000204713|chr6:28920021-28920021|C/A|missense_variant', 'ENST00000496091.1_1_6:28882986-28887935:-|nuORF', 'ENST00000498117.1_1_6:28879453-28889728:-|nuORF', 'nc|ENSG00000204713|P14373-2|TRIM27', 'ENST00000481474.5_1_6:28876558-28891553:-|nuORF'] 57181 14700 LDVEMKLWR True PC9_epitope_Rep1 1188.6325145631997 1188.6314099358601 61.363 2 -0.8315986540520082 0.2570064828667094 1.0 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 27535 10619 FNDGNAAVV True PC9_epitope_Rep2 905.4242956187699 905.42374496793 46.16 1 -0.8316435927798609 0.2570455646425213 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 81814 12721 PLPPVPASP True PC9_epitope_Rep2 873.4960040070499 873.49490993586 54.237 2 -0.831663024063024 0.2570561499992876 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 41378 7511 HYCFLAAFCW True NCI_RA007_Epitope_Rep4 1259.52560696651 1259.52397490379 35.537 3 -0.8316782251278518 0.25706673505442523 1.0 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 115915 7636 TSFSPPPPP True H1975_Epitope_Rep1 925.4545331178898 925.4539849679301 34.357 1 -0.8317840271245885 0.2571054093713048 1.0 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 119210 25690 VAKRTLGG True NCI_RA007_Epitope_Rep5 800.4868363056798 800.48628496793 106.36 1 -0.8317921615698142 0.2571054093713048 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 113021 5865 TLMSRRVCIQ True H1975_Epitope_Rep2 1205.63728267381 1205.63563490379 27.545 3 -0.8318111626761007 0.2571054093713048 1.0 ['ENSG00000279961|ENST00000623286|OR8U3'] 103634 20458 SPTLLVDRKRK True NCI_RA007_Epitope_Rep2 1311.7986683715096 1311.79756993586 84.649 2 -0.8318251073269991 0.2571054093713048 1.0 ['BCOR|p.R1131L|1|0.11|ENSG00000183337|chrX:40064446-40064446|C/A|missense_variant'] 121894 15498 VFQKSRFAP True PC9_epitope_Rep2 1078.5923640033798 1078.59126993586 64.886 2 -0.8318540726758494 0.2571054093713048 1.0 ['TAF6L|p.R593Pfs*8|1|0.26|ENSG00000162227|chr11:62787205-62787205|G/-|frameshift_variant', 'ENSG00000162227|ENST00000294168|TAF6L'] 64198 9913 LPGKAAGF True H1975_Epitope_Rep3 759.4279244472299 759.42682993586 43.162 2 -0.8319985740570713 0.25720147021112916 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2'] 122325 18354 VGCPRHQGV True PC9_epitope_Rep6 951.47086897171 951.46976993586 83.241 2 -0.8320831904745826 0.2572083879423329 1.0 ['ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 83329 9530 PTEDELSLP True H1975_Epitope_Rep3 999.4760564081099 999.47547496793 41.665 1 -0.8320861366848651 0.2572083879423329 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 55025 25175 KYRRTLKRHLL True PC9_epitope_Rep5 1482.9259345732999 1482.92482993586 101.98 2 -0.8321018389075524 0.2572153052793527 1.0 ['nc|ENSG00000205189|Q96DT7-4|ZBTB10', 'nc|ENSG00000205189|Q96DT7-3|ZBTB10', 'nc|ENSG00000205189|Q96DT7-2|ZBTB10', 'ENSG00000205189|ENST00000455036|ZBTB10'] 27537 10960 FNDGNAAVV True PC9_epitope_Rep3 905.4242956187699 905.42374496793 47.14 1 -0.8321254664084697 0.2572153052793527 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 121718 10267 VFLGRYKFT True PC9_epitope_Rep6 1129.6284151589298 1129.62676490379 50.172 3 -0.8322392228822266 0.2572258864086383 1.0 ['ENST00000531894.5_1_16:70011782-70023933:-|nuORF'] 28303 22083 FRRERDFRRRR True PC9_epitope_Rep3 1648.9247057866799 1648.9236099358602 90.238 2 -0.8322942548880115 0.25723646723646726 1.0 ['ENST00000488868.1_1_1:28559432-28559522:-|nuORF'] 85535 12117 QGAVGPEV True PC9_epitope_Rep4 755.38136817763 755.38026993586 54.416 2 -0.8323393883609977 0.2572470477628524 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 13654 10860 DPPDNLAE True H1975_Epitope_Rep2 869.37667672001 869.3761249679301 46.803 1 -0.8324631894861141 0.25730036181305377 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D'] 112891 12716 TLKSNLSL True PC9_epitope_Rep1 874.5123823471799 874.51128993586 53.784 2 -0.8325308429770164 0.2573036108539278 1.0 ['ENSG00000256087|ENST00000221315|ZNF432'] 63426 12783 LLVQKDILG True PC9_epitope_Rep4 997.6171817688898 997.61608993586 57.032 2 -0.8325311479664518 0.2573036108539278 1.0 ['ENST00000435989.6_1_19:58385349-58385952:-|nuORF'] 119928 12703 VDLSQHLYTFS True H1975_Epitope_Rep1 1308.6350166609998 1308.6339099358602 53.919 2 -0.8325876868325717 0.2573036108539278 1.0 ['nc|ENSG00000186628|A1L4K1-2|FSD2', 'ENSG00000186628|ENST00000334574|FSD2'] 11900 8650 DHKEITQQL True PC9_epitope_Rep1 1110.56693710118 1110.5658499358601 38.111 2 -0.8327859525676241 0.25745662763866334 1.0 ['ENSG00000205339|ENST00000379719|IPO7', 'ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 61518 7891 LKERLTKI True H1975_Epitope_Rep2 999.6440652230699 999.64296993586 35.299 2 -0.8328731061935712 0.25752051048313584 1.0 ['ENSG00000154359|ENST00000398246|LONRF1', 'nc|ENSG00000154359|Q17RB8-2|LONRF1'] 70817 5357 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep1 1442.6356288295895 1442.6345299358602 25.664 2 -0.8328883336787791 0.25752051048313584 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 141543 7228 YTMMGSEDH True H1975_Epitope_Rep2 1069.38448160573 1069.3833899358601 32.736 2 -0.8329265569905845 0.25752741774675975 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 119220 24695 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48628496793 103.48 1 -0.8329322423465052 0.25752741774675975 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 53276 16169 KQKLLLKKRHI True H1975_Epitope_Rep2 1403.94527303555 1403.9436149037901 67.405 3 -0.8329966881108252 0.2575379926222387 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 22805 5671 EVAAVAVLMC True PC9_epitope_Rep2 1004.5034745395999 1004.50236993586 27.203 2 -0.8330212401601996 0.2575412310935141 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 13537 9323 DNVLINTYSG True NCI_RA007_Epitope_Rep1 1094.52440358286 1094.5233099358602 40.259 2 -0.8330406491851841 0.2575412310935141 1.0 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 60858 7189 LHVTLTQKQEE True NCI_RA007_Epitope_Rep1 1324.6986795467199 1324.6975899358602 31.952 2 -0.8330444445159371 0.2575412310935141 1.0 ['ENST00000513468.5_1_5:54516196-54522465:-|nuORF', 'ENSG00000234602|ENST00000513312|MCIDAS'] 126927 15425 VLRAPHNPAP True PC9_epitope_Rep1 1070.5985120129799 1070.59740993586 64.151 2 -0.8331817941200794 0.2576087730541907 1.0 ['ENST00000339867.4_1_6:34544300-34544348:-|nuORF'] 122029 13761 VFVRPPNGT True PC9_epitope_Rep1 985.5345147740899 985.53340993586 57.776 2 -0.8332350997551032 0.25761934601800157 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 61842 5194 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 27.734 2 -0.8332643012549417 0.25764416024609427 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 130472 19982 VSPKEVATL True PC9_epitope_Rep5 942.5385970950199 942.53750993586 81.914 2 -0.8333252028386687 0.2576974564926372 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 56886 13738 LDPTAGSLSV True PC9_epitope_Rep5 958.49712620586 958.49602993586 57.866 2 -0.8334307127536713 0.2577365100613794 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549'] 79546 10343 PDDHLAEALL True PC9_epitope_Rep4 1092.54513902744 1092.5440499358601 47.478 2 -0.8334864169281694 0.25774708060381657 1.0 ['ENSG00000109089|ENST00000337231|CDR2L'] 116876 5273 TVFAAAEE True NCI_RA007_Epitope_Rep3 836.39159850816 836.39050993586 27.745 2 -0.8334961529945187 0.25774986828427815 1.0 ['ENSG00000038219|ENST00000040738|BOD1L1'] 136525 15052 WWDIYYTLFEK True H1975_Epitope_Rep1 1562.7445671099797 1562.74346993586 63.148 2 -0.8335427999550784 0.25774986828427815 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 131307 8171 VTGFHNWI True NCI_RA007_Epitope_Rep1 972.4817509252399 972.48064993586 35.781 2 -0.833587549213608 0.25774986828427815 1.0 ['nc|ENSG00000111405|P21128-3|ENDOU', 'nc|ENSG00000111405|P21128-2|ENDOU', 'ENSG00000111405|ENST00000422538|ENDOU'] 136069 15105 WRHKLIHCVGP True PC9_epitope_Rep2 1344.72372960944 1344.7226299358601 63.359 2 -0.8335908226047746 0.25774986828427815 1.0 ['ENST00000540664.5_1_10:98592059-98593206:+|nuORF'] 118999 11324 VAERVYREI True PC9_epitope_Rep3 1133.61930702721 1133.61766490379 48.564 3 -0.8336014309898518 0.25774986828427815 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6'] 51030 3916 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 19.789 3 -0.8336333311579281 0.25774986828427815 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 93713 13094 RQWKKYDF True PC9_epitope_Rep4 1169.5981776598098 1169.59654490379 58.259 3 -0.8336427106792227 0.25774986828427815 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 128010 20566 VPILSHPTGTL True PC9_epitope_Rep1 1133.64445914589 1133.6433699358602 83.921 2 -0.8336857146749885 0.2577746767671014 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant'] 129948 24023 VRVGALLL True NCI_RA007_Epitope_Rep3 839.5592729699499 839.5587249679301 104.05 1 -0.8337483683945445 0.2578137236754047 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 141619 24048 YTRVVRRTL True PC9_epitope_Rep1 1162.6934750269797 1162.69183490379 97.311 3 -0.8337716100315147 0.2578385305425032 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA'] 124368 24630 VGTYWKRLM True PC9_epitope_Rep2 1152.6113851958 1152.61087496793 100.38 1 -0.8337795521977928 0.25784542658617154 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 22816 6047 EVAAVAVLMC True PC9_epitope_Rep5 1004.5034745395999 1004.5029749679301 28.252 1 -0.8337941802697681 0.25784542658617154 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 132438 25613 VVAVAGTIIL True PC9_epitope_Rep5 954.61136811246 954.6108149679301 103.85 1 -0.8340040792687029 0.2579556618683525 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 64939 7083 LQELDSWLP True NCI_RA007_Epitope_Rep1 1099.55497543515 1099.5538699358601 31.545 2 -0.8340351739357217 0.25796622718341544 1.0 ['ENST00000545225.5_2_17:40994478-40994634:+|nuORF'] 102328 14644 SLSSFHIK True PC9_epitope_Rep1 917.49706663621 917.49596993586 61.151 2 -0.8341628680154175 0.25804798177546806 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2'] 65549 19966 LRRRKRDWVIP True PC9_epitope_Rep6 1493.9055334818897 1493.9044299358602 89.462 2 -0.8343275281255397 0.25808702090096247 1.0 ['TOP1-CDH4|1|fusion', 'CDH4|p.I691Mfs*56|1|0.25|ENSG00000179242|chr20:61929676-61929676|C/-|frameshift_variant', 'nc|ENSG00000179242|P55283-2|CDH4', 'ENSG00000179242|ENST00000614565|CDH4'] 43595 10981 IGTHTEKVS True PC9_epitope_Rep1 970.5083595959 970.50726993586 47.128 2 -0.8343492909934551 0.25810447187459956 1.0 ['nc|ENSG00000155307|Q9NSI8-3|SAMSN1', 'ENSG00000155307|ENST00000400566|SAMSN1'] 88952 14988 QVHYSLGNF True PC9_epitope_Rep4 1063.50869394907 1063.50758993586 65.591 2 -0.8343621015990645 0.25810447187459956 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15'] 120606 5745 VEHQSQLIV True H1975_Epitope_Rep2 1051.56620882519 1051.5651099358602 27.095 2 -0.8343730856617328 0.25810447187459956 1.0 ['DSCAM|p.N748Kfs*38|1|0.29|ENSG00000171587|chr21:40276209-40276210|-/T|frameshift_variant', 'DSCAM|p.V784Lfs*6|1|0.32|ENSG00000171587|chr21:40276103-40276103|C/-|frameshift_variant', 'nc|ENSG00000171587|O60469-2|DSCAM', 'DSCAM|p.D1921Afs*63|1|0.05|ENSG00000171587|chr21:40013310-40013311|GT/-|frameshift_variant', 'ENSG00000171587|ENST00000400454|DSCAM'] 140153 18388 YQSAKPAL True PC9_epitope_Rep2 876.4705175351999 876.46942993586 76.061 2 -0.8344081304969583 0.2581150341685649 1.0 ['nc|ENSG00000179388|Q06889-2|EGR3', 'ENSG00000179388|ENST00000317216|EGR3'] 117077 17710 TVIQLVGILR True NCI_RA007_Epitope_Rep5 1110.71247913606 1110.71197496793 74.903 1 -0.8344492963367038 0.2581255961617859 1.0 ['EPHA7|p.M738I|1|0.36|ENSG00000135333|chr6:93255996-93255996|C/A|missense_variant'] 81862 12240 PLQVAVLGP True H1975_Epitope_Rep3 892.5382031721999 892.53765496793 52.256 1 -0.8346036353926338 0.2581356945591208 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 12284 10640 DILSAQLPHMQ True H1975_Epitope_Rep1 1251.6281574587501 1251.6270699358602 45.884 2 -0.8346060884450314 0.2581356945591208 1.0 ['ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant'] 74946 12463 NHLVIASV True PC9_epitope_Rep5 851.48650195251 851.48540993586 52.938 2 -0.8346061109026036 0.2581356945591208 1.0 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF'] 51031 2135 KKKKKKKKKSF True H1975_Epitope_Rep3 1404.9656741269598 1404.96403490379 11.447 3 -0.8346370098815677 0.2581356945591208 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 119223 24879 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48628496793 104.22 1 -0.8346689428792775 0.2581356945591208 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 32807 6119 GHGSVSVTMI True PC9_epitope_Rep2 986.48551597634 986.48440993586 28.932 2 -0.8347592789277971 0.25818482036098617 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'nc|ENSG00000204271|Q5JUX0-2|SPIN3'] 136294 16534 WSLSYIFFP True H1975_Epitope_Rep1 1158.57498260374 1158.57334490379 68.971 3 -0.8347660114393304 0.25818482036098617 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 6443 8196 APSAVAEKGP True H1975_Epitope_Rep1 925.4868958753299 925.48578993586 36.466 2 -0.834776693323798 0.25818482036098617 1.0 ['GRIN2A|p.A26V|1|0.55|ENSG00000183454|chr16:10180335-10180335|G/A|missense_variant'] 100370 15611 SKTQSHSD True H1975_Epitope_Rep2 888.39372376648 888.39262993586 65.204 2 -0.8347803151178704 0.25818482036098617 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 68863 13861 LTMSYSGLYQ True PC9_epitope_Rep6 1161.53761111885 1161.53596490379 65.138 3 -0.8348060658097084 0.25818482036098617 1.0 ['ENSG00000166250|ENST00000448775|CLMP', 'ENST00000527977.5_1_11:122953793-122955421:-|nuORF'] 121483 7009 VEYKFYDLP True H1975_Epitope_Rep3 1172.5753765265597 1172.57426993586 31.924 2 -0.8348261258359396 0.25818482036098617 1.0 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-4|RPGRIP1'] 23893 4481 EYIYQFFEDKR True H1975_Epitope_Rep3 1536.7248942945596 1536.7232549037901 22.354 3 -0.8348576239417478 0.2582238480918964 1.0 ['ENSG00000158077|ENST00000299481|NLRP14', 'NLRP14|p.L805Ffs*6|1|0.12|ENSG00000158077|chr11:7057798-7057798|C/-|frameshift_variant', 'NLRP14|p.A488Cfs*22|1|0.17|ENSG00000158077|chr11:7043481-7043482|-/T|frameshift_variant'] 3542 12292 AGLRRVLRT True PC9_epitope_Rep4 1040.65669559544 1040.65558993586 55.096 2 -0.8349860729459971 0.25829134284168875 1.0 ['TENM3|p.D2614Afs*134|1|0.21|ENSG00000218336|chr4:182800056-182800057|-/GCTGGCGCTGCACGTGCGCTACGGCATGACCCTG|frameshift_variant'] 130446 10206 VSNLPKLP True PC9_epitope_Rep1 866.52255310806 866.52144993586 44.136 2 -0.8350053571785587 0.2583019002206249 1.0 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 66311 6779 LSFSKDPS True NCI_RA007_Epitope_Rep2 879.43379767331 879.43270993586 30.984 2 -0.8350552535407079 0.25836571444838236 1.0 ['ENST00000354670.8_1_15:40382930-40383443:-|nuORF'] 48455 7483 KAAQVTAG True NCI_RA007_Epitope_Rep1 744.4130026590799 744.4124549679301 33.099 1 -0.8350776125060978 0.25836571444838236 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 57432 10141 LEATRRQRMDY True H1975_Epitope_Rep1 1437.7146810473698 1437.71358993586 43.946 2 -0.8351394992509528 0.2583762703179709 1.0 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 70645 26893 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 111.26 3 -0.8352204976770139 0.25838682588707496 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 45756 5108 ISAGGYIK True PC9_epitope_Rep4 807.44905381463 807.44794993586 26.302 2 -0.835281730904766 0.2583973811557074 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 17997 16401 EIDREFHNKLK True NCI_RA007_Epitope_Rep2 1427.7521121019097 1427.75100993586 68.524 2 -0.835412710051791 0.258450634064417 1.0 ['nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A', 'ENST00000403062.2_1_6:122004885-122004996:+|nuORF'] 58778 7008 LESGPLAA True H1975_Epitope_Rep2 756.40176926904 756.40122496793 31.879 1 -0.8354475987650468 0.25845750964234376 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-3|MZF1'] 119224 24963 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48628496793 104.56 1 -0.835466886367308 0.25845750964234376 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 69309 10373 LTVEENYRL True PC9_epitope_Rep1 1135.5873381925899 1135.58569490379 44.784 3 -0.8356488496922931 0.2585961516566094 1.0 ['nc|ENSG00000150527|Q96PC5-6|MIA2', 'nc|ENSG00000150527|Q96PC5-11|MIA2', 'nc|ENSG00000150527|Q96PC5-13|MIA2', 'nc|ENSG00000150527|Q96PC5-5|MIA2', 'nc|ENSG00000150527|Q96PC5-8|MIA2', 'nc|ENSG00000150527|Q96PC5-10|MIA2', 'nc|ENSG00000150527|Q96PC5-9|MIA2', 'nc|ENSG00000150527|Q96PC5-14|MIA2', 'nc|ENSG00000150527|Q96PC5-7|MIA2', 'nc|ENSG00000150527|Q96PC5-12|MIA2', 'ENSG00000150527|ENST00000640607|MIA2'] 84311 7906 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 35.237 2 -0.835679515911209 0.25863148606723024 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 37408 13759 GVTALQLP True NCI_RA007_Epitope_Rep5 797.46470387877 797.46360993586 59.605 2 -0.835685535137447 0.25863148606723024 1.0 ['ENSG00000177045|ENST00000317578|SIX5', 'ENST00000560168.1_1_19:46269581-46272089:-|nuORF'] 13575 12382 DPEEEEPVYI True PC9_epitope_Rep2 1218.5292141797797 1218.5281099358601 52.937 2 -0.835723545902653 0.2586631373720987 1.0 ['nc|ENSG00000144460|Q9P242|NYAP2', 'ENSG00000144460|ENST00000272907|NYAP2'] 94392 18644 RRRRGRVH True NCI_RA007_Epitope_Rep5 1091.6649092937098 1091.6638099358602 78.526 2 -0.8357244706271756 0.2586631373720987 1.0 ['ENST00000260643.6_1_2:27357356-27357503:-|nuORF'] 66359 11848 LSGFQGDFLWP True PC9_epitope_Rep6 1265.6080736371696 1265.60641490379 56.779 3 -0.8357447534805685 0.2586631373720987 1.0 ['ENSG00000244165|ENST00000321826|P2RY11'] 133507 23763 VWKLRRDLIFV True PC9_epitope_Rep2 1443.87143938895 1443.87034993586 96.877 2 -0.8357923089259188 0.25867000611916724 1.0 ['ENSG00000065457|ENST00000564657|ADAT1'] 37145 7458 GVQEYIQQP True NCI_RA007_Epitope_Rep3 1060.5189242795998 1060.5178299358602 36.457 2 -0.8358008365822044 0.25867000611916724 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF', 'ENST00000489499.5_1_1:114442984-114447339:-|nuORF'] 28263 6469 FRMFYYAKDEW True H1975_Epitope_Rep1 1554.69657137174 1554.69546993586 29.945 2 -0.8358271427753378 0.2586805555555556 1.0 ['GPR18|p.C94Afs*54|1|0.3|ENSG00000125245|chr13:99255594-99255594|G/-|frameshift_variant', 'ENSG00000125245|ENST00000397470|GPR18'] 126986 10713 VLRSFRLL True NCI_RA007_Epitope_Rep4 1002.6338348925399 1002.63272993586 48.054 2 -0.8358551288388582 0.25869110469170237 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant', 'SCN10A|p.A856Pfs*16|1|0.41|ENSG00000185313|chr3:38728616-38728616|C/-|frameshift_variant'] 66500 5987 LSHGKRNP True H1975_Epitope_Rep3 907.4987979717099 907.49770993586 28.04 2 -0.8360297774187266 0.2587016535276205 1.0 ['ENST00000472109.1_1_17:42797561-42797837:-|nuORF'] 85939 13920 QHIHRVYRQ True NCI_RA007_Epitope_Rep4 1235.6635718810298 1235.6624699358601 60.818 2 -0.8360524060274316 0.2587122020633227 1.0 ['ENSG00000115112|ENST00000263707|TFCP2L1', 'ENST00000464621.1_1_2:121981919-121991838:-|nuORF'] 5878 5287 APGGFVHSA True PC9_epitope_Rep4 841.40825163181 841.40714993586 27.042 2 -0.8361259030752418 0.2587227502988218 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 79500 8230 PCCGCCCG True PC9_epitope_Rep5 744.15217989724 744.15162496793 36.596 1 -0.8362188871458865 0.2587475276406221 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 46546 10442 ITAANQTGGLY True H1975_Epitope_Rep2 1107.5560380643099 1107.5549499358601 45.18 2 -0.8363448116466224 0.25882185543540126 1.0 ['ENSG00000140678|ENST00000268296|ITGAX', 'ITGAX|p.T817Nfs*33|1|0.3|ENSG00000140678|chr16:31373329-31373330|-/A|frameshift_variant', 'ENST00000567409.1_1_16:31366575-31368500:+|nuORF', 'ITGAX|p.R426Afs*20|1|0.38|ENSG00000140678|chr16:31362665-31362665|C/-|frameshift_variant', 'ITGAX|p.H482Ifs*44|1|0.42|ENSG00000140678|chr16:31363014-31363014|C/-|frameshift_variant', 'ITGAX|p.V928Lfs*50|1|0.21|ENSG00000140678|chr16:31377257-31377257|G/-|frameshift_variant'] 19139 14690 ELGRLSLRAYT True H1975_Epitope_Rep1 1277.7091846607698 1277.70808993586 61.722 2 -0.8363504699957531 0.25882185543540126 1.0 ['BCL6|p.P405L|1|0.07|ENSG00000113916|chr3:187729191-187729191|G/A|missense_variant'] 93608 19338 RQPKKFQKGRK True NCI_RA007_Epitope_Rep3 1399.8524352798697 1399.8507749037901 84.42 3 -0.8363547981476525 0.25882185543540126 1.0 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 86800 7717 QLNLNNEWTL True H1975_Epitope_Rep3 1243.61970095003 1243.6186099358601 34.668 2 -0.8363611698433208 0.25882871859081985 1.0 ['ENSG00000136802|ENST00000372600|LRRC8A'] 117324 9586 TVNPQDPSY True H1975_Epitope_Rep1 1019.45598966987 1019.45488993586 41.797 2 -0.8363674134841674 0.25882871859081985 1.0 ['ENSG00000117971|ENST00000261751|CHRNB4', 'CHRNB4|p.V220M|1|0.26|ENSG00000117971|chr15:78629647-78629647|C/T|missense_variant'] 133288 20948 VVTSVKTRVS True PC9_epitope_Rep6 1074.6397081186199 1074.6386099358601 93.362 2 -0.8364465969727785 0.2588677205014015 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 124556 12838 VGVPVGSALP True H1975_Epitope_Rep3 894.5174677276199 894.51691496793 54.602 1 -0.8364765569603722 0.25887826532354447 1.0 ['ENSG00000163872|ENST00000305135|YEATS2'] 126739 24726 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 106.93 3 -0.8365056404782799 0.2588851264832257 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 60200 19091 LGPLLDVVKE True PC9_epitope_Rep4 1081.63831113629 1081.63720993586 81.524 2 -0.8365106230241717 0.2588851264832257 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79553706-79569486:-|nuORF'] 14808 15925 DVQRILSQI True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 69.183 2 -0.8365294718210048 0.2589098979896709 1.0 ['nc|ENSG00000089847|Q8TF21-2|ANKRD24', 'ENSG00000089847|ENST00000318934|ANKRD24'] 110254 18121 TERKRRHA True NCI_RA007_Epitope_Rep5 1052.59515796804 1052.59457496793 76.506 1 -0.8365947866979473 0.2589346687912588 1.0 ['nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 56755 20533 LDLPLSLLH True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 84.412 2 -0.8366677507628454 0.25897366586521364 1.0 ['ENST00000488375.2_2_17:16220949-16229209:+|nuORF', 'ENSG00000108474|ENST00000225609|PIGL'] 72175 3265 MGFWCGCAFC True PC9_epitope_Rep2 1123.37478595251 1123.37368993586 17.81 2 -0.836705899778212 0.25900160755694024 1.0 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|84', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|84'] 106516 10925 STLPKSLSL True PC9_epitope_Rep1 944.55424715916 944.55314993586 46.909 2 -0.8367119604843901 0.25900160755694024 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 20233 11874 ENLLKSLQAPE True NCI_RA007_Epitope_Rep2 1240.66631678928 1240.66520993586 50.789 2 -0.8367480127300521 0.25900160755694024 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 79222 7590 PAPLRAAPAA True PC9_epitope_Rep5 933.5396001545298 933.53850993586 34.145 2 -0.8367737288145382 0.25900160755694024 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 99497 5548 SIDEVHHK True NCI_RA007_Epitope_Rep4 963.4773938207901 963.47628993586 27.938 2 -0.8368053669520091 0.25902637493953967 1.0 ['SPHKAP|p.T1640Pfs*16|1|0.09|ENSG00000153820|chr2:227991042-227991042|G/-|frameshift_variant', 'nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 99627 20411 SIFKYNPVLN True PC9_epitope_Rep2 1193.6444591458899 1193.6433699358602 83.937 2 -0.8368166262639019 0.2590332309092978 1.0 ['ENSG00000178150|ENST00000595607|ZNF114', 'nc|ENSG00000178150|Q8NC26-2|ZNF114'] 134118 5602 VYLAEKGEND True NCI_RA007_Epitope_Rep3 1136.5349682665599 1136.53333490379 29.03 3 -0.8368350765455038 0.2590332309092978 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 123754 17174 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 72.832 1 -0.8369418073397964 0.2590543116447125 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 19953 16444 ELVQYRWPRWL True H1975_Epitope_Rep1 1544.8252174725199 1544.8241299358601 68.615 2 -0.8369469403346269 0.2590543116447125 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 3044 20677 AFRRRRWRRR True NCI_RA007_Epitope_Rep5 1514.9031824964597 1514.9015249037902 86.492 3 -0.8369873003222772 0.25906802082444313 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 11330 11091 DELPKHQVGF True H1975_Epitope_Rep1 1168.58767254576 1168.58656993586 47.625 2 -0.8370208673893041 0.25906802082444313 1.0 ['PDE6A|p.L772H|1|0.26|ENSG00000132915|chr5:149866213-149866213|A/T|missense_variant'] 23656 8730 EYAGSKGRF True PC9_epitope_Rep5 1013.4930438849299 1013.49194993586 38.521 2 -0.837022020581917 0.25906802082444313 1.0 ['HELQ|p.K1025Sfs*15|1|0.08|ENSG00000163312|chr4:83416856-83416857|-/ATTTCTATAGA|frameshift_variant', 'ENSG00000163312|ENST00000295488|HELQ'] 70152 11754 LVPPFFSRDHS True H1975_Epitope_Rep3 1300.65642081192 1300.6553299358602 50.355 2 -0.8370570811680524 0.25906802082444313 1.0 ['ENST00000466122.5_1_21:42602051-42602099:+|nuORF'] 3046 20851 AFRRRRWRRR True NCI_RA007_Epitope_Rep5 1514.9031824964597 1514.9015249037902 87.198 3 -0.8371072563636138 0.25907855994765516 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 121887 10347 VFPRALWEL True PC9_epitope_Rep6 1129.6284151589298 1129.62676490379 50.515 3 -0.8371453016095304 0.2590885816692268 1.0 ['FAM53A|p.R387L|1|0.31|ENSG00000174137|chr4:1641330-1641330|C/A|missense_variant'] 34790 8286 GQGPYPYS True PC9_epitope_Rep4 867.37628279719 867.37518993586 39.332 2 -0.8371582164233562 0.2590885816692268 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'nc|ENSG00000204352|Q5T035|FAM120A2P'] 19830 5753 ELSRSAPAV True H1975_Epitope_Rep3 928.4977949121999 928.49668993586 27.155 2 -0.8372144135367602 0.2590885816692268 1.0 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 19698 15307 ELRLYVQTAT True PC9_epitope_Rep4 1192.6451874218797 1192.6440899358602 66.812 2 -0.8372233753831733 0.2590885816692268 1.0 ['ENST00000222120.7_1_19:11447875-11448118:-|nuORF'] 3741 9206 AGSNGYLR True PC9_epitope_Rep1 836.41406528824 836.41296993586 40.261 2 -0.837229298536959 0.2590885816692268 1.0 ['PPP1R16B|p.A238S|1|0.25|ENSG00000101445|chr20:38905984-38905984|G/T|missense_variant'] 30710 18962 GALGDLHLTTL True PC9_epitope_Rep2 1109.60807363717 1109.6069699358602 78.3 2 -0.8372496507966225 0.2590917495128785 1.0 ['ENSG00000109101|ENST00000579795|FOXN1'] 13833 13232 DQLKRNHTRV True H1975_Epitope_Rep1 1265.69526593213 1265.6941699358601 55.994 2 -0.837259022387858 0.2590917495128785 1.0 ['ENSG00000133020|ENST00000403437|MYH8'] 30904 6902 GAQDSFPLQQK True H1975_Epitope_Rep1 1217.6040508858898 1217.6029499358601 31.588 2 -0.8372745509975839 0.2590917495128785 1.0 ['ENSG00000094804|ENST00000209728|CDC6'] 136532 15195 WWDIYYTLFEK True NCI_RA007_Epitope_Rep2 1562.7445671099797 1562.74346993586 63.797 2 -0.8373099731334328 0.2591165092729548 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 138851 17378 YKDDKGNVVF True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 74.847 2 -0.8373890799420409 0.2591554904498457 1.0 ['GSAP|p.C367Lfs*10|1|0.46|ENSG00000186088|chr7:77355575-77355576|-/A|frameshift_variant', 'nc|ENSG00000186088|A4D1B5-3|GSAP', 'nc|ENSG00000186088|A4D1B5-2|GSAP', 'ENSG00000186088|ENST00000257626|GSAP'] 131963 7196 VTSATAPNPV True PC9_epitope_Rep4 955.49746055903 955.49636993586 34.982 2 -0.8374766702841125 0.25922291435560485 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF'] 21533 10238 ERMPEQIRL True PC9_epitope_Rep6 1170.61792712822 1170.61627490379 50.039 3 -0.8374835967378227 0.25923344947735194 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 134121 5862 VYLAEKGEND True NCI_RA007_Epitope_Rep5 1136.5349682665599 1136.53333490379 29.233 3 -0.837507513703107 0.2592439842994482 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 129224 16226 VQTLRWQRWQR True H1975_Epitope_Rep1 1555.84841252859 1555.84730993586 67.761 2 -0.837568478203931 0.2592687401339648 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 25167 19922 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 82.028 2 -0.8376009545882697 0.25927927415455504 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25186 119 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 0.68138 2 -0.8376844122877041 0.2593182496906953 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 131409 14830 VTHQGLSSP True PC9_epitope_Rep2 924.46649478392 924.46538993586 62.307 2 -0.8377630591124067 0.25936775643122256 1.0 ['nc|ENSG00000211592|P01834|IGKC'] 60819 9725 LHTERLLK True NCI_RA007_Epitope_Rep2 1008.6080140675199 1008.60690993586 42.448 2 -0.8377994813349026 0.25936775643122256 1.0 ['ENST00000420353.6_1_12:53907497-53907599:-|nuORF'] 69344 10860 LTVMNQYQSL True H1975_Epitope_Rep3 1195.59070932087 1195.5896099358602 46.855 2 -0.8378804549063306 0.2593888201584119 1.0 ['ENST00000552540.5_2_12:57107337-57108468:-|nuORF'] 102211 11317 SLSCGHSR True H1975_Epitope_Rep3 845.3813852609701 845.38083496793 48.638 1 -0.8378927509489859 0.2593888201584119 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34'] 120394 11571 VEEKWRLLP True H1975_Epitope_Rep3 1168.6604435631998 1168.65934993586 49.636 2 -0.8380106902953374 0.25943832207607537 1.0 ['ENSG00000013503|ENST00000228347|POLR3B', 'POLR3B|p.G467Vfs*33|1|0.27|ENSG00000013503|chr12:106430408-106430408|G/-|frameshift_variant'] 129816 22791 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 92.476 2 -0.838038037402801 0.25943832207607537 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 79694 14651 PDSFNIPGSS True PC9_epitope_Rep6 1019.45598966987 1019.45488993586 68.276 2 -0.8380879278815281 0.2594488524869892 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 16850 10864 EFDLNNEGEI True PC9_epitope_Rep3 1178.5091474415399 1178.50750490379 46.764 3 -0.8381229645879139 0.2594662230374383 1.0 ['nc|ENSG00000126878|Q9BQI0-4|AIF1L', 'ENSG00000126878|ENST00000247291|AIF1L', 'nc|ENSG00000126878|Q9BQI0-2|AIF1L'] 113901 13060 TNQNLQYFLDR True NCI_RA007_Epitope_Rep2 1410.68917749218 1410.68808993586 55.429 2 -0.8381251349801505 0.2594662230374383 1.0 ['ENSG00000004799|ENST00000005178|PDK4'] 85072 7362 QEITISSKFRG True H1975_Epitope_Rep1 1264.6775501793197 1264.67644993586 33.325 2 -0.8381580690708312 0.2594662230374383 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 111711 16584 TIGGLNKK True PC9_epitope_Rep1 829.50215201665 829.50104993586 68.615 2 -0.8381715356373215 0.259473063087401 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 3309 17036 AGGERWQRVLL True PC9_epitope_Rep5 1283.7098533671099 1283.7087499358602 70.546 2 -0.8381831170245584 0.259473063087401 1.0 ['ENSG00000101400|ENST00000217381|SNTA1', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 113231 6917 TLQPTPGLPSP True H1975_Epitope_Rep1 1106.5971746003 1106.5960699358602 31.648 2 -0.8382394167804617 0.25949412082521717 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 9682 13207 AYFRVMVDSL True PC9_epitope_Rep5 1199.60088008175 1199.5997899358601 55.808 2 -0.8382609928347703 0.25949412082521717 1.0 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107'] 14839 16275 DVVKVLSKTTE True H1975_Epitope_Rep3 1217.68671788069 1217.68617496793 68.07 1 -0.8382990485126468 0.25951517736546525 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 133526 20488 VWNPFLDVI True PC9_epitope_Rep4 1101.58588164061 1101.58478993586 86.956 2 -0.8383122717304399 0.25951517736546525 1.0 ['nc|ENSG00000136827|O14656-2|TOR1A', 'ENST00000473084.1_1_9:132584712-132586364:-|nuORF'] 44067 11680 IILKRKRGRPP True NCI_RA007_Epitope_Rep2 1332.8830071321597 1332.88135490379 50.026 3 -0.8383622475486688 0.25958257506824384 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 40694 3554 HRRVMILNHPD True NCI_RA007_Epitope_Rep2 1386.7302715418598 1386.72862490379 18.473 3 -0.8383882258062939 0.2595931017814237 1.0 ['ENSG00000120675|ENST00000379221|DNAJC15'] 77457 16995 NSVGNSSFLF True H1975_Epitope_Rep3 1070.5032742154601 1070.5021699358601 70.966 2 -0.8384330054664474 0.25961415430984236 1.0 ['ENST00000448299.6_1_1:247264349-247264421:-|nuORF'] 100198 20037 SIVDGNDDGKF True PC9_epitope_Rep1 1165.52513185885 1165.5240299358602 81.9 2 -0.8384496497642657 0.25961415430984236 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant', 'FAT3|p.H1979Tfs*13|1|0.35|ENSG00000165323|chr11:92799397-92799397|C/-|frameshift_variant'] 774 14930 AAVRRPRS True NCI_RA007_Epitope_Rep3 911.54133149003 911.54022993586 66.169 2 -0.8384778114199588 0.2596531134489622 1.0 ['ENST00000330871.3_1_17:76355142-76356149:-|nuORF'] 67699 5926 LSWLPDNSD True PC9_epitope_Rep5 1045.47163973401 1045.4705499358602 27.789 2 -0.8385114841942245 0.2596599471155213 1.0 ['ENSG00000104804|ENST00000221399|TULP2'] 122230 21385 VGAPRRPG True PC9_epitope_Rep1 808.4667695674399 808.46566993586 87.091 2 -0.838517642034486 0.2596599471155213 1.0 ['ENST00000262659.12_2_20:30606778-30607201:+|nuORF'] 25087 20361 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 84.25 2 -0.8385535541191437 0.25966678039349483 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 28716 17923 FSRRHYSL True PC9_epitope_Rep4 1064.55156182056 1064.55046993586 76.99 2 -0.83858655949198 0.25966678039349483 1.0 ['ENST00000475655.1_1_1:28655643-28657251:+|nuORF'] 17021 9186 EGDLVKKESF True NCI_RA007_Epitope_Rep2 1150.5870038394198 1150.5859099358602 40.339 2 -0.8386005657743597 0.25967730471248845 1.0 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-3|ARHGAP17'] 61665 23297 LKRRIWRMPLF True PC9_epitope_Rep4 1514.9020283245798 1514.9003849037902 97.867 3 -0.838608347494419 0.2596841372055667 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 110020 6819 TEKETSLEETK True NCI_RA007_Epitope_Rep2 1293.6299908502099 1293.6288899358601 31.139 2 -0.8386154751520728 0.2596841372055667 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 63691 22586 LMVMRRLL True PC9_epitope_Rep4 1030.6143624012598 1030.6132699358602 95.111 2 -0.83872599547343 0.25971570717839376 1.0 ['ENST00000430945.5_1_9:94907296-94910408:+|nuORF'] 65732 17347 LSCMSRWV True PC9_epitope_Rep2 980.45719305352 980.45608993586 71.978 2 -0.8387553796301426 0.25971570717839376 1.0 ['ENST00000598660.1_1_19:18723732-18729158:+|nuORF'] 66808 11883 LSLVFNCSHVL True PC9_epitope_Rep5 1230.6430792469 1230.64144490379 50.707 3 -0.8387578140368825 0.25971570717839376 1.0 ['ENST00000374279.3_1_9:114695950-114696010:+|nuORF'] 123246 7066 VGLHQQAP True PC9_epitope_Rep5 848.4504507969599 848.44934993586 32.147 2 -0.8388197100885361 0.25972253809415513 1.0 ['ENST00000415949.5_1_7:54825255-54826914:-|nuORF'] 121613 11123 VFGGFYLLF True NCI_RA007_Epitope_Rep5 1061.5586042636098 1061.55750993586 49.421 2 -0.8388459673627963 0.25972253809415513 1.0 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 31954 8060 GENVEALRNLS True PC9_epitope_Rep5 1200.6098645423199 1200.6087699358602 35.94 2 -0.8388836018036016 0.2597614884937387 1.0 ['nc|ENSG00000154265|Q8WWZ7-2|ABCA5', 'ENSG00000154265|ENST00000392676|ABCA5'] 67078 8138 LSQEKNDL True PC9_epitope_Rep3 945.4767251144499 945.47562993586 36.282 2 -0.8388965449129678 0.25977201012024903 1.0 ['nc|ENSG00000002079|Q9H6N6|MYH16'] 108962 18748 TAEKPVPAL True PC9_epitope_Rep5 924.5280324113198 924.52692993586 77.126 2 -0.8390058405656232 0.259781975298114 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.S1050I|1|0.29|ENSG00000038427|chr5:83521455-83521455|G/T|missense_variant'] 115385 24397 TRKMRMRWKRR True H1975_Epitope_Rep2 1603.9140070739497 1603.91236490379 100.38 3 -0.8390107903272414 0.259781975298114 1.0 ['GPIHBP1|p.A3Rfs*77|1|0.18|ENSG00000277494|chr8:143213273-143213273|G/-|frameshift_variant'] 41454 15771 HYKPTPLYF True PC9_epitope_Rep1 1164.59678067748 1164.59568993586 65.486 2 -0.8390185072791353 0.259781975298114 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 57541 21398 LEDQEILMHHP True PC9_epitope_Rep2 1360.64453579888 1360.64342993586 87.778 2 -0.8390401832643165 0.259781975298114 1.0 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000474988.5_1_6:36410818-36454949:+|nuORF', 'nc|ENSG00000112078|Q7Z5Y7-2|KCTD20'] 86991 9414 QLYWYYLEQFQ True PC9_epitope_Rep5 1579.7347307022699 1579.7330849037899 41.166 3 -0.8390425845913706 0.259781975298114 1.0 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 99849 8500 SILGSSKILL True NCI_RA007_Epitope_Rep5 1029.6433965167298 1029.6422899358602 39.379 2 -0.839115760504507 0.2598351335986356 1.0 ['ENST00000555658.5_1_14:89730286-89817056:-|nuORF'] 56589 7057 LDHHKEQP True H1975_Epitope_Rep2 1002.4882928576599 1002.48718993586 32.071 2 -0.8392904730700527 0.2598456531317065 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ATG2B|p.E1224Dfs*7|1|0.12|ENSG00000066739|chr14:96313406-96313407|-/A|frameshift_variant'] 44274 22865 ILAVLLPPVM True PC9_epitope_Rep1 1064.6667748136 1064.66566993586 92.743 2 -0.8393229450712565 0.2598703845825872 1.0 ['ENSG00000091947|ENST00000206380|TMEM101'] 129716 17407 VRPRPGTG True NCI_RA007_Epitope_Rep3 838.47733425114 838.47622993586 76.374 2 -0.8393678446744124 0.25988034163741525 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 95549 20738 RWRRWRRRRR True NCI_RA007_Epitope_Rep2 1638.9780787722198 1638.97642490379 85.755 3 -0.8394574145089134 0.25988034163741525 1.0 ['ENST00000396912.1_1_7:5085705-5085882:+|nuORF'] 84805 9487 QEADQLWRRLQ True H1975_Epitope_Rep1 1441.74261004737 1441.7415099358602 41.411 2 -0.8394727243441501 0.25988034163741525 1.0 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 19899 12524 ELTRKIGFDP True PC9_epitope_Rep1 1174.6346227381798 1174.63352993586 53.044 2 -0.839477406700251 0.25988034163741525 1.0 ['ENSG00000153790|ENST00000283905|C7orf31'] 92609 18986 RMVKKMKK True NCI_RA007_Epitope_Rep2 1047.64091150227 1047.63980993586 78.703 2 -0.8394836248680987 0.25988034163741525 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 107878 13812 SVVLEKAKVV True PC9_epitope_Rep2 1070.66994561774 1070.6688499358602 58.411 2 -0.8395019421175517 0.2598908594815825 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 98480 20609 SFISKRRVP True PC9_epitope_Rep2 1088.6454622054 1088.6443699358601 84.706 2 -0.8395451038912194 0.2599155878298683 1.0 ['ENST00000393543.7_1_12:68720268-68720871:-|nuORF', 'nc|ENSG00000111554|Q8TC05-2|MDM1', 'ENST00000545724.2_1_12:68718988-68726025:-|nuORF', 'nc|ENSG00000111554|Q8TC05-4|MDM1', 'nc|ENSG00000111554|Q8TC05|MDM1', 'ENSG00000111554|ENST00000682720|MDM1'] 99935 14303 SINLKDFF True PC9_epitope_Rep4 982.5123823471799 982.51128993586 62.917 2 -0.8395740792726558 0.25992241122053117 1.0 ['nc|ENSG00000021461|Q9HB55-4|CYP3A43', 'nc|ENSG00000021461|Q9HB55-3|CYP3A43', 'ENSG00000021461|ENST00000354829|CYP3A43', 'nc|ENSG00000021461|Q9HB55-2|CYP3A43'] 7626 8158 ASGLAATVTI True PC9_epitope_Rep2 902.50729696674 902.50618993586 36.737 2 -0.8395879801614409 0.25992241122053117 1.0 ['ENSG00000116761|ENST00000370938|CTH', 'nc|ENSG00000116761|P32929-2|CTH'] 66540 10887 LSHWKRSLF True PC9_epitope_Rep2 1172.6454622054 1172.6438249037901 47.194 3 -0.8396113783492836 0.2599292342233527 1.0 ['ENST00000369847.3_2_10:105086334-105104817:-|nuORF'] 83901 16608 PVPTLWNEPAE True H1975_Epitope_Rep1 1251.6135529404298 1251.6129749679299 69.26 1 -0.8396348272122993 0.2599292342233527 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 37989 7368 HAKEQLPKYQY True NCI_RA007_Epitope_Rep1 1403.7197493444698 1403.71810490379 32.654 3 -0.8397754306707598 0.26001761964306014 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'ENST00000504704.6_1_4:159690364-159754995:+|nuORF'] 124582 10490 VGVSSSTSV True PC9_epitope_Rep3 821.41306222873 821.41196993586 45.289 2 -0.8397780353711386 0.26001761964306014 1.0 ['ENSG00000112837|ENST00000369663|TBX18'] 89858 11208 RARWQHTL True PC9_epitope_Rep1 1066.57844527474 1066.5773499358602 47.993 2 -0.8397886431167951 0.26001761964306014 1.0 ['ENST00000461203.5_1_5:131746692-131785425:+|nuORF'] 11236 6602 DEEEFFEIRTE True NCI_RA007_Epitope_Rep1 1442.6201544424996 1442.6190499358602 29.694 2 -0.8398457716227995 0.26004916239219084 1.0 ['ENSG00000168994|ENST00000380283|PXDC1', 'ENST00000485986.1_1_6:3739369-3751753:-|nuORF', 'ENST00000477592.2_1_6:3737425-3751765:-|nuORF'] 79468 4766 PAVVDHRG True NCI_RA007_Epitope_Rep4 849.44569976969 849.44460993586 24.765 2 -0.8398890984926098 0.26004916239219084 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 86683 17458 QLIDTYASF True PC9_epitope_Rep5 1056.51277627 1056.51166993586 72.152 2 -0.8398984295608303 0.26004916239219084 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 74197 4918 NEFFKQVFK True H1975_Epitope_Rep3 1185.61824439805 1185.6171499358602 24.045 2 -0.8399580793855067 0.2600596760443308 1.0 ['ENST00000379565.7_1_X:20168583-20168808:-|nuORF'] 79655 14986 PDQRDEAP True PC9_epitope_Rep3 926.4093738306199 926.40826993586 62.772 2 -0.8400177520522977 0.26006649427410417 1.0 ['ENSG00000174279|ENST00000308618|EVX2'] 84316 7941 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 35.484 2 -0.8400283728633726 0.26006649427410417 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 82677 10028 PQQPLPPPQPG True PC9_epitope_Rep2 1154.6084079903399 1154.60730993586 43.898 2 -0.8400507500910557 0.26007700723185995 1.0 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B', 'ENST00000395675.4_1_17:18575624-18576137:-|nuORF'] 111707 14343 TIGAEKLKV True PC9_epitope_Rep2 957.5858816406098 957.58478993586 60.433 2 -0.8402020467300465 0.2601301432143669 1.0 ['ENSG00000185053|ENST00000382080|SGCZ', 'nc|ENSG00000185053|Q96LD1|SGCZ'] 52720 25145 KMIPQLLILWL True PC9_epitope_Rep2 1366.84105077746 1366.8399499358602 102.39 2 -0.8403063349890707 0.26015486254173475 1.0 ['ENST00000370751.9_1_1:79110053-79110347:+|nuORF'] 121634 11632 VFHPYHFELVK True H1975_Epitope_Rep3 1414.7397565130598 1414.7386499358602 49.876 2 -0.8403216676651559 0.2601653737959253 1.0 ['nc|ENSG00000140481|Q8N5R6|CCDC33', 'nc|ENSG00000140481|Q8N5R6-2|CCDC33', 'ENSG00000140481|ENST00000398814|CCDC33'] 5930 6511 APGSAKSLT True PC9_epitope_Rep5 830.44978209062 830.44868993586 30.018 2 -0.8403503519865123 0.26018951286386044 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7'] 48744 4297 KDFNAFCKDLP True NCI_RA007_Epitope_Rep2 1296.6172584218798 1296.6156149037902 21.353 3 -0.8403854971999771 0.26018951286386044 1.0 ['nc|ENSG00000105971|P51636-3|CAV2'] 8803 6850 AVDSGMPK True NCI_RA007_Epitope_Rep1 803.38473930591 803.38364993586 30.65 2 -0.840395459614075 0.26018951286386044 1.0 ['nc|ENSG00000277880|A0A087X0K7|TRBV17'] 135511 856 WKERILKAK True PC9_epitope_Rep1 1170.7237125260997 1170.7220549037902 4.7444 3 -0.8404433124717053 0.26018951286386044 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 114288 22833 TPPPSLKELL True PC9_epitope_Rep2 1093.63831113629 1093.63720993586 93.316 2 -0.8404501087933504 0.26018951286386044 1.0 ['ENSG00000124104|ENST00000491381|SNX21'] 65283 15061 LQWDLCTGL True PC9_epitope_Rep1 1047.50591706775 1047.50480993586 62.751 2 -0.8405111137587232 0.26021422888964657 1.0 ['ENST00000377044.8_2_9:74319663-74324196:-|nuORF'] 69028 18414 LTQEQNFSQDV True PC9_epitope_Rep1 1307.59935942827 1307.5977149037901 75.62 3 -0.8405470019333009 0.26023466575754994 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 133183 24874 VVRRKLGDLRK True H1975_Epitope_Rep2 1338.85718630714 1338.85555490379 102.25 3 -0.8405602586933837 0.26023466575754994 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 65279 8094 LQVNKVMSILF True H1975_Epitope_Rep3 1290.73697963174 1290.73588993586 36.107 2 -0.8405832786258642 0.26023466575754994 1.0 ['NTF3|p.L112Wfs*48|1|0.17|ENSG00000185652|chr12:5494543-5494543|C/-|frameshift_variant', 'ENSG00000185652|ENST00000423158|NTF3'] 107571 18320 SVPETAPAAI True PC9_epitope_Rep4 954.5022115862998 954.50110993586 78.537 2 -0.8406043645715494 0.26023466575754994 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 230 19554 AAFTAFEEA True PC9_epitope_Rep3 955.4287122928698 955.42760993586 80.449 2 -0.8406220437570155 0.26023466575754994 1.0 ['ENSG00000007080|ENST00000445755|CCDC124'] 42864 8151 IEQRLQQRN True H1975_Epitope_Rep1 1183.6421677301098 1183.64106993586 36.293 2 -0.840629820699979 0.26023466575754994 1.0 ['ENST00000606299.1_1_5:148886668-148892751:-|nuORF'] 122123 11275 VGAFTSLFLLK True NCI_RA007_Epitope_Rep2 1194.7012457460198 1194.70014993586 48.445 2 -0.8406584587123175 0.26025937868435634 1.0 ['ENST00000455661.5_1_10:129796851-129797109:+|nuORF'] 26735 7375 FKAFFRWLY True PC9_epitope_Rep5 1276.67569970452 1276.67404490379 33.325 3 -0.8406616037823985 0.26027299973012513 1.0 ['nc|ENSG00000053900|Q9UJX5-2|ANAPC4', 'ENSG00000053900|ENST00000315368|ANAPC4', 'nc|ENSG00000053900|Q9UJX5-3|ANAPC4', 'ENST00000505842.5_1_4:25404608-25415394:+|nuORF'] 37769 10067 GYAYKEVSEP True PC9_epitope_Rep3 1141.5291546101298 1141.52804993586 43.677 2 -0.840663865640625 0.26027299973012513 1.0 ['PRDM9|p.H189Y|1|0.36|ENSG00000164256|chr5:23522360-23522360|C/T|missense_variant'] 136729 9715 WYFWRRHVFIW True PC9_epitope_Rep5 1694.8622716875798 1694.86063490379 42.336 3 -0.8406651419674387 0.26027299973012513 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 123071 23834 VGKFRMYVAV True PC9_epitope_Rep3 1168.6426853240798 1168.64217496793 96.963 1 -0.8406669160389163 0.26027299973012513 1.0 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant'] 95837 22042 RYIRLRFQRIR True PC9_epitope_Rep6 1575.9586316839097 1575.95698490379 97.718 3 -0.8406880713552588 0.2602835066189421 1.0 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant', 'LAMA2|p.G1251Afs*24|1|0.21|ENSG00000196569|chr6:129315774-129315774|G/-|frameshift_variant', 'LAMA2|p.A438Hfs*14|1|0.34|ENSG00000196569|chr6:129177710-129177710|G/-|frameshift_variant'] 115539 21445 TRSELLPFL True PC9_epitope_Rep5 1074.6073453611798 1074.6062499358602 87.543 2 -0.8407902349408807 0.26030821674596977 1.0 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 23195 7134 EVLNKAGPNAS True PC9_epitope_Rep2 1098.5669371011797 1098.5658499358601 32.835 2 -0.8408520640750854 0.2603292286278353 1.0 ['ENSG00000135372|ENST00000257829|NAT10', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 33468 18003 GLASLQIP True PC9_epitope_Rep6 797.46470387877 797.46360993586 81.876 2 -0.8408833699704739 0.2603292286278353 1.0 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1'] 129788 24544 VRRKGLGK True NCI_RA007_Epitope_Rep3 912.5981180901598 912.5975649679301 106.18 1 -0.8409332772214231 0.2603397341211226 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 72580 9434 MLQMVQLF True PC9_epitope_Rep5 1008.5136453004799 1008.51254993586 41.243 2 -0.8409512211224537 0.26034284415787307 1.0 ['ENSG00000187231|ENST00000428443|SESTD1'] 136866 5619 YADSGKLLC[Carbamidomethyl]F True NCI_RA007_Epitope_Rep2 1172.55359581559 1172.5524899358602 26.471 2 -0.8409514813017057 0.26034284415787307 1.0 ['ENST00000449567.6_1_11:24518651-24807587:+|nuORF'] 113253 10709 TLRERLRHWQS True PC9_epitope_Rep6 1480.801127983 1480.79947490379 52.002 3 -0.840960685628685 0.26034284415787307 1.0 ['ENST00000392088.6_1_2:220119039-220119258:-|nuORF'] 57349 16066 LEAEVRQLTL True PC9_epitope_Rep5 1170.6608374860198 1170.6597499358602 66.786 2 -0.840998591187491 0.2603638532657322 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B'] 64197 9698 LPGKAAGF True H1975_Epitope_Rep1 759.4279244472299 759.42682993586 42.228 2 -0.8410432645188431 0.2603638532657322 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2'] 137793 6195 YEQHWYKDHHY True H1975_Epitope_Rep1 1604.67967543764 1604.6785699358602 28.898 2 -0.8410599323479497 0.2603743573721135 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2'] 13593 5888 DPGAQLLQAS True H1975_Epitope_Rep2 998.50327421546 998.50216993586 27.634 2 -0.841105416165022 0.26041326421927147 1.0 ['ENST00000482272.5_1_2:219266889-219267112:+|nuORF'] 115619 20270 TRVDTILEF True PC9_epitope_Rep3 1092.5815245361598 1092.5804299358601 83.225 2 -0.8411956342568068 0.2604484712498402 1.0 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 55784 17276 LANELRRP True PC9_epitope_Rep6 967.5563128478299 967.55520993586 79.054 2 -0.8412050892659527 0.2604484712498402 1.0 ['CON__Q28194', 'THBS1|p.N973Mfs*26|1|0.09|ENSG00000137801|chr15:39593147-39593147|A/-|frameshift_variant', 'nc|ENSG00000137801|P07996-2|THBS1', 'ENSG00000137801|ENST00000260356|THBS1'] 91395 24961 RHHLLGGLL True PC9_epitope_Rep5 1014.6086827738599 1014.60758993586 101.19 2 -0.841366569907932 0.2605546798449282 1.0 ['ENST00000369037.8_1_6:107655524-107780637:-|nuORF'] 59445 7805 LFPGAPKG True PC9_epitope_Rep1 785.44357451137 785.44246993586 34.846 2 -0.8413997483830136 0.2605546798449282 1.0 ['ENSG00000179588|ENST00000319555|ZFPM1'] 133289 21485 VVTSVKTRVS True PC9_epitope_Rep6 1074.6397081186199 1074.6386099358601 95.518 2 -0.8415064974439364 0.2606145806708131 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 82523 25377 PPRRGGVLLG True PC9_epitope_Rep3 1020.6192474575597 1020.61867496793 103.03 1 -0.8415078094755694 0.2606145806708131 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 67162 10537 LSQTVLPV True PC9_epitope_Rep1 855.5065686907499 855.50546993586 45.422 2 -0.8415241312975424 0.2606145806708131 1.0 ['ENST00000378797.6_2_13:46917478-46918883:-|nuORF'] 105983 7822 [Acetylation]-SSTDPAALC-[Carbamidomethyl] True H1975_Epitope_Rep2 962.40151216459 962.40040993586 35.035 2 -0.8415433721273761 0.2606250798744728 1.0 ['CSRNP2|p.S473A|1|0.2|ENSG00000110925|chr12:51063961-51063961|A/C|missense_variant', 'ENSG00000110925|ENST00000228515|CSRNP2'] 76149 7232 NMVGLSYPPAV True H1975_Epitope_Rep1 1146.5743309807401 1146.5732299358601 32.828 2 -0.8415562104281996 0.26063557877996135 1.0 ['nc|ENSG00000154678|Q14123-2|PDE1C', 'ENSG00000154678|ENST00000396191|PDE1C', 'nc|ENSG00000154678|Q14123-3|PDE1C'] 131979 5404 VTSGEQKPIY True NCI_RA007_Epitope_Rep5 1120.5764391557198 1120.57534993586 27.475 2 -0.8416695067425554 0.26067447639332625 1.0 ['SCYL3|p.P603Yfs*16|1|0.12|ENSG00000000457|chr1:169854632-169854633|-/AATAGGCTTCTGCTCCCCTGAGGTA|frameshift_variant'] 135758 21861 WMALLLDQET True H1975_Epitope_Rep2 1218.59546034814 1218.59380490379 90.402 3 -0.8417097530800279 0.2606775714204578 1.0 ['ENSG00000170927|ENST00000371117|PKHD1', 'nc|ENSG00000170927|P08F94-2|PKHD1'] 12808 10276 DLFMIEIMEM True H1975_Epitope_Rep3 1270.5647544668197 1270.5636499358602 44.577 2 -0.8417237701034775 0.2606775714204578 1.0 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 31482 10034 GEAQLYRQFTT True H1975_Epitope_Rep1 1312.6411646706 1312.64006993586 43.534 2 -0.8417319551102818 0.2606775714204578 1.0 ['ENSG00000166073|ENST00000561100|GPR176', 'nc|ENSG00000166073|Q14439-3|GPR176'] 22802 5400 EVAAVAVLMC True PC9_epitope_Rep2 1004.5034745395999 1004.50236993586 26.166 2 -0.8419246185630218 0.2607782178498928 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 94696 8910 RRYSRETRHTK True H1975_Epitope_Rep3 1488.8021906121596 1488.80108993586 39.271 2 -0.8419455607768807 0.2607782178498928 1.0 ['ENST00000543067.5_1_X:21392559-21392961:+|nuORF'] 108005 9542 SWRRRWQHRYW True H1975_Epitope_Rep3 1715.86579392823 1715.86414490379 41.712 3 -0.841983069263422 0.2607782178498928 1.0 ['ENST00000570069.5_1_16:1826945-1827407:+|nuORF', 'ENST00000561903.6_1_16:1826945-1828699:+|nuORF'] 63355 14952 LLTQYFQI True PC9_epitope_Rep2 1024.5593325395998 1024.55822993586 62.772 2 -0.8420067139001909 0.2607782178498928 1.0 ['ENST00000507447.1_1_5:54960464-54965471:-|nuORF'] 129296 22580 VQVQRRKKVT True PC9_epitope_Rep4 1240.7727879768397 1240.7716899358602 95.087 2 -0.842013959141647 0.2607782178498928 1.0 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 129984 5459 VRVSTVPSPP True H1975_Epitope_Rep3 1037.58694426977 1037.58584993586 26.054 2 -0.8420191969431847 0.2607782178498928 1.0 ['ENST00000438373.5_3_7:63774298-63774469:+|nuORF'] 101639 17968 SLLRRDHPV True PC9_epitope_Rep2 1091.61997573355 1091.6188699358602 74.417 2 -0.8420458294730503 0.2607782178498928 1.0 ['ENSG00000214700|ENST00000429849|C12orf71'] 25169 178 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 1.0151 2 -0.8420524443395546 0.2607782178498928 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 33977 17224 GLSRGGKMRL True PC9_epitope_Rep3 1073.61278217813 1073.61168993586 71.405 2 -0.8420717637769021 0.2607782178498928 1.0 ['ENST00000355068.4_1_17:7210662-7213200:+|nuORF'] 33371 21370 GKVQQLHSL True PC9_epitope_Rep2 1008.5716285587998 1008.57052993586 87.669 2 -0.8420749930171025 0.2607782178498928 1.0 ['ENSG00000100558|ENST00000216446|PLEK2'] 2091 11617 AELERNVAL True PC9_epitope_Rep3 1013.55055876105 1013.54946993586 49.701 2 -0.8421079129718829 0.2607782178498928 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 36091 11134 GVAEVRGCL True PC9_epitope_Rep1 902.4643866089399 902.46328993586 47.711 2 -0.8421127575686257 0.2607782178498928 1.0 ['ENST00000454075.7_1_12:57501969-57504947:-|nuORF'] 69525 7097 LVDAGQQLP True NCI_RA007_Epitope_Rep1 939.5025459394699 939.50144993586 31.599 2 -0.8421224992672837 0.2607782178498928 1.0 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 73083 7896 MREPIMKADML True H1975_Epitope_Rep1 1333.65563515989 1333.6545299358602 35.325 2 -0.8421252783975569 0.2607782178498928 1.0 ['MAGEB1|p.G212Afs*13|1|0.77|ENSG00000214107|chrX:30251126-30251126|G/-|frameshift_variant', 'MAGEB1|p.P301Hfs*8|1|0.16|ENSG00000214107|chrX:30251393-30251393|C/-|frameshift_variant', 'ENSG00000214107|ENST00000397548|MAGEB1'] 112819 16210 TLILESQNWR True PC9_epitope_Rep5 1258.66698549562 1258.6653449037901 67.344 3 -0.8421353804409308 0.2607782178498928 1.0 ['nc|ENSG00000033170|Q9BYC5-2|FUT8', 'nc|ENSG00000033170|Q9BYC5-3|FUT8', 'ENSG00000033170|ENST00000673929|FUT8'] 22977 6725 EVETGLNR True NCI_RA007_Epitope_Rep5 916.4614094034799 916.46030993586 32.539 2 -0.8421621863227918 0.2607887116007041 1.0 ['ENST00000475170.5_1_21:46313479-46313557:-|nuORF'] 77713 10765 NTLERREKHEK True H1975_Epitope_Rep3 1438.7640737679396 1438.7629699358602 46.488 2 -0.8421972695647986 0.26080229389052917 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 66342 9668 LSGARTFRLAP True NCI_RA007_Epitope_Rep1 1187.6774906096698 1187.67638993586 41.605 2 -0.8422031092238047 0.26080229389052917 1.0 ['ENSG00000125910|ENST00000246115|S1PR4'] 108766 19714 SYSPLLREF True PC9_epitope_Rep3 1110.57095985246 1110.5698699358602 81.059 2 -0.8422137107826054 0.26080229389052917 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5', 'LAMA5|p.D641Gfs*42|1|0.13|ENSG00000130702|chr20:62337908-62337909|-/C|frameshift_variant'] 6085 4214 APLPYSFSPD True H1975_Epitope_Rep3 1092.5127762700001 1092.51166993586 21.327 2 -0.8422233925881867 0.26080229389052917 1.0 ['ENST00000477970.1_1_1:44086064-44087671:+|nuORF'] 18943 10029 ELEHSDSVK True PC9_epitope_Rep6 1042.49310345458 1042.49200993586 49.145 2 -0.842318155426612 0.2608053824644079 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1'] 75317 15207 NILSLINVN True PC9_epitope_Rep4 998.5760452329 998.57494993586 66.418 2 -0.8423278850143315 0.2608053824644079 1.0 ['nc|ENSG00000164253|Q9HAD4-2|WDR41', 'ENSG00000164253|ENST00000296679|WDR41', 'ENST00000502528.5_1_5:76728962-76747206:-|nuORF'] 25038 18763 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 77.125 2 -0.8423355601205065 0.2608053824644079 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 82524 25467 PPRRGGVLLG True PC9_epitope_Rep3 1020.6192474575597 1020.61867496793 103.41 1 -0.8423996286680738 0.26081217265410983 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 19724 19954 ELRRFRKRP True PC9_epitope_Rep3 1256.75780661904 1256.75670993586 81.996 2 -0.8424273501882447 0.26081217265410983 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 57462 12907 LECHLWHIL True PC9_epitope_Rep6 1162.59573513166 1162.5940949037902 61.179 3 -0.8424549187794304 0.2608189624583067 1.0 ['ENSG00000180917|ENST00000434935|CMTR2'] 105917 3197 SSSDSSSDSD True PC9_epitope_Rep1 972.31559258508 972.31504496793 17.178 1 -0.8424862917151761 0.2608189624583067 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'ENSG00000130382|ENST00000252674|MLLT1'] 31569 9968 GEEIPTQK True H1975_Epitope_Rep1 900.45526139388 900.45416993586 43.278 2 -0.8426010672084954 0.2608720336096287 1.0 ['ENST00000544307.1_1_12:20725060-20833202:+|nuORF', 'ENSG00000172572|ENST00000359062|PDE3A'] 121447 7667 VEWRLKTK True PC9_epitope_Rep5 1058.6236641316598 1058.6225699358602 34.435 2 -0.8427970753493266 0.2609676824162255 1.0 ['nc|ENSG00000170100|Q96MU6|ZNF778'] 107086 12122 SVHKFFNLLKE True PC9_epitope_Rep5 1360.7503211967598 1360.74922993586 51.616 2 -0.8428455192667438 0.26097817139288654 1.0 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF'] 125396 8769 VISHKEEVP True H1975_Epitope_Rep1 1036.5553097883198 1036.5542099358602 38.66 2 -0.8429081536974886 0.2610028527228601 1.0 ['ENSG00000172497|ENST00000307624|ACOT12', 'ACOT12|p.E369Rfs*9|1|0.26|ENSG00000172497|chr5:81342695-81342695|C/-|frameshift_variant', 'ACOT12|p.D417Tfs*10|1|0.44|ENSG00000172497|chr5:81335781-81335781|C/-|frameshift_variant'] 56915 15777 LDQEIYVNK True PC9_epitope_Rep3 1120.5764391557198 1120.57534993586 65.843 2 -0.8429914917775104 0.2610059322755528 1.0 ['KIF14|p.E1019D|1|0.37|ENSG00000118193|chr1:200589274-200589274|T/A|missense_variant'] 118779 14350 VAAATTTLL True PC9_epitope_Rep4 859.50148331031 859.50038993586 63.103 2 -0.8430053145537967 0.2610059322755528 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2'] 23419 13112 EVSSRLLLAP True PC9_epitope_Rep1 1083.62880908175 1083.6277099358601 55.302 2 -0.8430378811961338 0.2610059322755528 1.0 ['ENSG00000124134|ENST00000537075|KCNS1'] 74367 7560 NERDYRDRRYV True PC9_epitope_Rep1 1540.74948633296 1540.7478449037899 33.897 3 -0.8430735325104022 0.2610269073569482 1.0 ['ENSG00000113240|ENST00000316308|CLK4', 'ENST00000520878.5_1_5:178045553-178050259:-|nuORF', 'ENST00000520126.1_1_5:178045553-178054033:-|nuORF', 'ENST00000520199.5_1_5:178044267-178054033:-|nuORF'] 79693 16902 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.45488993586 70.028 2 -0.8430813824769902 0.2610269073569482 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 129973 22551 VRVRGSGV True NCI_RA007_Epitope_Rep4 828.4929843152798 828.49188993586 97.868 2 -0.8431020198928376 0.2610299856670498 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 4110 10272 AHSHSYSH True PC9_epitope_Rep1 924.3838277891202 924.38272993586 44.396 2 -0.843118599459937 0.2610299856670498 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 54112 8322 KVLQNFYSFQK True PC9_epitope_Rep3 1400.7452358163198 1400.7436049037901 36.983 3 -0.8431221430256478 0.2610299856670498 1.0 ['ENST00000398804.7_1_1:44165719-44170106:-|nuORF', 'ENST00000434346.1_1_1:44168245-44170073:-|nuORF'] 55783 13077 LANEKTTL True PC9_epitope_Rep5 888.4916469026 888.49054993586 55.307 2 -0.8431270322355363 0.2610404722711018 1.0 ['ENSG00000168631|ENST00000462446|MUCL3'] 27048 5478 FLFEGLFQFCE True PC9_epitope_Rep1 1378.6267604764196 1378.62511490379 25.902 3 -0.8431373591758979 0.2610509585775305 1.0 ['ENST00000604849.1_2_X:53171236-53171878:+|nuORF'] 57899 3735 LEFWRLDYWED True NCI_RA007_Epitope_Rep2 1570.70924423042 1570.70758490379 19.17 3 -0.8431679829219533 0.2610713018800993 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 3777 14737 AGTFSQPEKVY True PC9_epitope_Rep3 1225.59790287629 1225.5968099358602 61.825 2 -0.8431765441553809 0.2610713018800993 1.0 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 83135 21556 PSQPRARKRR True PC9_epitope_Rep6 1250.7432191840599 1250.74212993586 95.789 2 -0.8431893759977706 0.2610713018800993 1.0 ['ENST00000394998.5_1_16:31044619-31045584:+|nuORF', 'ENST00000493902.5_1_16:31044585-31047064:+|nuORF'] 110089 7559 TELWTAMLNY True H1975_Epitope_Rep3 1240.579810284 1240.5787099358602 34.058 2 -0.8432230007517997 0.2610713018800993 1.0 ['NRXN3|p.R291Qfs*26|1|0.31|ENSG00000021645|chr14:78715085-78715086|-/A|frameshift_variant', 'nc|ENSG00000021645|Q9Y4C0-4|NRXN3', 'ENSG00000021645|ENST00000335750|NRXN3', 'nc|ENSG00000021645|Q9Y4C0|NRXN3', 'nc|ENSG00000021645|Q9Y4C0-3|NRXN3'] 95842 23580 RYKFIHLNV True NCI_RA007_Epitope_Rep3 1188.6767623336798 1188.67566993586 102.29 2 -0.8432335629167654 0.2610713018800993 1.0 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'NLRP11|p.N1007Ifs*16|1|0.14|ENSG00000179873|chr19:55785709-55785709|A/-|frameshift_variant', 'ENSG00000179873|ENST00000589093|NLRP11'] 98089 15771 SERKYYYYERH True PC9_epitope_Rep5 1592.73719031376 1592.73608993586 65.657 2 -0.8432344219450022 0.2610713018800993 1.0 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 9201 8715 AVMEETAILS True H1975_Epitope_Rep1 1062.52671208198 1062.52560993586 38.45 2 -0.8432701775235083 0.2610817867075316 1.0 ['nc|ENSG00000163072|Q8IVI9-3|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-2|NOSTRIN', 'ENSG00000163072|ENST00000317647|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-4|NOSTRIN', 'ENST00000486873.2_1_2:169699570-169711975:+|nuORF'] 58029 11028 LEHTWRQLRRS True PC9_epitope_Rep1 1480.8011279829998 1480.79947490379 47.308 3 -0.8432762823159301 0.2610848621575221 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 24695 20364 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.5424049679301 85.148 1 -0.8432994755839499 0.2610848621575221 1.0 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 110500 9884 TFGVMWAFL True NCI_RA007_Epitope_Rep5 1070.52592423634 1070.52482993586 44.663 2 -0.8433017908334376 0.2610848621575221 1.0 ['ENST00000546562.5_1_12:53709537-53714427:-|nuORF'] 11158 20579 DDLESLLSEHT True H1975_Epitope_Rep3 1257.57247597409 1257.57136993586 86.008 2 -0.843383175760461 0.2611095346197503 1.0 ['nc|ENSG00000160224|O43918-2|AIRE', 'nc|ENSG00000160224|O43918-4|AIRE', 'ENSG00000160224|ENST00000291582|AIRE'] 137434 19325 YEDEYVLEDL True PC9_epitope_Rep6 1286.55542892762 1286.55432993586 86.983 2 -0.8434260273197453 0.2611200181609228 1.0 ['ENSG00000181789|ENST00000314797|COPG1'] 38775 10106 HGTREKTL True PC9_epitope_Rep3 940.5090283022399 940.50792993586 43.825 2 -0.8434524462787137 0.26113050140461397 1.0 ['ENST00000520580.5_1_5:65460613-65466462:+|nuORF'] 106520 10545 STLPKSLSL True PC9_epitope_Rep2 944.55424715916 944.55314993586 45.881 2 -0.8434865250897949 0.26115517216917555 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 14275 10261 DSSYSSDDEDP True H1975_Epitope_Rep1 1215.40513586547 1215.40402993586 44.411 2 -0.8435079194482228 0.26117613676668794 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 59870 10870 LGGALGTPGPG True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 46.697 2 -0.8435142186218093 0.26117613676668794 1.0 ['ENST00000359236.9_1_12:118541400-118541646:-|nuORF'] 110807 9676 TGLITTTKL True PC9_epitope_Rep4 946.5698972233 946.56880993586 44.847 2 -0.8435202147385592 0.2612008058337826 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.L2931Wfs*101|1|0.21|ENSG00000086570|chr5:151542336-151542336|G/-|frameshift_variant', 'FAT2|p.E2578Dfs*50|1|0.03|ENSG00000086570|chr5:151543393-151543394|-/TAACCCAG|frameshift_variant', 'FAT2|p.S1818Afs*5|1|0.17|ENSG00000086570|chr5:151545676-151545676|G/-|frameshift_variant'] 27359 12411 FLSRTFLRVN True NCI_RA007_Epitope_Rep4 1251.7087907379498 1251.7076899358601 54.737 2 -0.8435487708503963 0.26122176824424015 1.0 ['ENSG00000072840|ENST00000264956|EVC'] 102327 5600 SLSRYLYHQRW True NCI_RA007_Epitope_Rep4 1507.76843087239 1507.76677490379 28.139 3 -0.8435692314005087 0.26122176824424015 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant'] 106526 10032 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 46.251 2 -0.8436003723203617 0.2612322490033906 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 82823 7881 PRSCHCTPAWR True PC9_epitope_Rep3 1312.59172946372 1312.59007490379 35.299 3 -0.8436464679658379 0.26124272946517235 1.0 ['AluSc_dup26247|chr14:55143427-55143722:-|2.329685434224244|0.0255733500930304|6.51|540.0|11|3|sense'] 58398 10256 LENQNTQEIP True PC9_epitope_Rep6 1184.567331024 1184.56622993586 50.12 2 -0.843677594512683 0.26127787550360326 1.0 ['nc|ENSG00000109684|Q7Z7G1-3|CLNK', 'ENSG00000109684|ENST00000226951|CLNK'] 85314 5595 QERLTQVQEA True NCI_RA007_Epitope_Rep4 1200.6098645423197 1200.6087699358602 28.121 2 -0.8436959891727432 0.26127787550360326 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 112790 8675 TLIDSSSHDEW True H1975_Epitope_Rep2 1288.5571602631198 1288.55606993586 38.329 2 -0.843795359303232 0.2613025406777978 1.0 ['nc|ENSG00000142794|Q9H094-3|NBPF3', 'ENSG00000142794|ENST00000318249|NBPF3', 'nc|ENSG00000142794|Q9H094-5|NBPF3', 'ENST00000477050.1_1_1:21799915-21805851:+|nuORF', 'nc|ENSG00000142794|Q9H094-2|NBPF3'] 19653 7430 ELRARSGF True H1975_Epitope_Rep1 934.4984636185399 934.49736993586 33.583 2 -0.84385145474057 0.2613130195477629 1.0 ['ENST00000369980.7_2_X:153276291-153276363:-|nuORF'] 81024 22491 PILVMKFI True PC9_epitope_Rep5 959.58779621691 959.58668993586 91.515 2 -0.8439257395119376 0.26133768352365416 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 15848 10297 EDFEQKYNFRF True PC9_epitope_Rep1 1521.6888431390096 1521.68719490379 44.493 3 -0.8439643117444094 0.26136911685437886 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 19954 4129 ELVQYWDQCFY True NCI_RA007_Epitope_Rep1 1492.6333024088399 1492.6316549037901 20.141 3 -0.8439762366428258 0.26136911685437886 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 15605 9495 EARQQEKHFEV True PC9_epitope_Rep5 1399.6844264649098 1399.6827749037902 41.479 3 -0.8439944031371351 0.26136911685437886 1.0 ['nc|ENSG00000186185|Q86Y91-6|KIF18B', 'ENSG00000186185|ENST00000593135|KIF18B'] 112279 24776 TKRQHKRKS True NCI_RA007_Epitope_Rep1 1167.6948720093098 1167.69322490379 102.57 3 -0.8440245539366007 0.26139377863515795 1.0 ['ENST00000269214.9_1_18:19155190-19155674:-|nuORF'] 111309 9824 THMTAIVGM-[Oxidation] True PC9_epitope_Rep3 975.4517737003499 975.45066993586 42.748 2 -0.8440664387279478 0.26139683980596295 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 6205 11157 APPAKVSVVP True PC9_epitope_Rep2 963.5753169569099 963.57420993586 48.241 2 -0.8441009294744115 0.26139683980596295 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 72617 8259 MLWLYLAP True PC9_epitope_Rep1 1005.5357606440499 1005.53466993586 36.602 2 -0.8441037798798272 0.26139683980596295 1.0 ['ENST00000483825.5_1_1:167400597-167400867:-|nuORF'] 127799 14813 VPEDPTQCFLL True PC9_epitope_Rep5 1260.60602503184 1260.6049299358601 61.979 2 -0.8441106415210123 0.2614036083059117 1.0 ['ENSG00000159348|ENST00000367249|CYB5R1', 'ENST00000497655.1_1_1:202932056-202932895:-|nuORF'] 96864 7452 SASNFNMRNT True NCI_RA007_Epitope_Rep3 1140.4982059183599 1140.4971099358602 36.435 2 -0.8441117899693086 0.2614036083059117 1.0 ['OTOA|p.S314A|1|0.32|ENSG00000155719|chr16:21700987-21700987|T/G|missense_variant'] 113143 22891 TLPLLMDSVIQ True PC9_epitope_Rep5 1228.6737106688402 1228.67260993586 93.049 2 -0.8442049168584588 0.26142826749875897 1.0 ['CON__ENSEMBL:ENSBTAP00000016285'] 130643 15287 VSTAEKLL True PC9_epitope_Rep5 859.5014833103098 859.50038993586 63.811 2 -0.8442521672191403 0.2614522762728691 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A', 'nc|ENSG00000168026|Q8NDW8-3|TTC21A'] 123151 15876 VGKRNARA True NCI_RA007_Epitope_Rep5 870.5147823890198 870.5142349679301 67.788 1 -0.8442668654359969 0.2614522762728691 1.0 ['ENST00000405731.7_1_7:6618146-6618326:+|nuORF', 'ENST00000396707.6_1_7:6617123-6618326:+|nuORF'] 124332 12408 VGTRGTLL True PC9_epitope_Rep1 815.4865019525099 815.48540993586 52.589 2 -0.844281159581736 0.2614522762728691 1.0 ['nc|ENSG00000183060|Q5XG99-2|LYSMD4'] 94363 10399 RRRPLLLSLL True NCI_RA007_Epitope_Rep1 1235.8190098932698 1235.81737490379 44.433 3 -0.8442976317586696 0.2614522762728691 1.0 ['ENSG00000179580|ENST00000569714|RNF151'] 20733 16357 EQERRRWQQRD True NCI_RA007_Epitope_Rep1 1585.7821834435697 1585.78108993586 67.737 2 -0.844298973323825 0.2614522762728691 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 91674 7224 RIWFQNRRMKW True NCI_RA007_Epitope_Rep1 1619.8619544177495 1619.8603049037902 32.089 3 -0.8443121884772137 0.26145533447733044 1.0 ['DBX1|p.K226R|1|0.09|ENSG00000109851|chr11:20156569-20156569|T/C|missense_variant'] 75720 4760 NLKYFEYIMAK True NCI_RA007_Epitope_Rep4 1418.72680887086 1418.72515490379 24.742 3 -0.8443125463168997 0.26145533447733044 1.0 ['nc|ENSG00000122884|P13674-3|P4HA1', 'nc|ENSG00000122884|P13674-2|P4HA1', 'ENSG00000122884|ENST00000394890|P4HA1'] 44500 16525 ILLLFWIIFY True NCI_RA007_Epitope_Rep1 1339.79441785487 1339.7933299358601 68.393 2 -0.8443165650111378 0.26145533447733044 1.0 ['ENST00000374024.3_1_1:27721873-27722296:+|nuORF'] 81114 9996 PKDIFFLEERR True H1975_Epitope_Rep3 1448.7775985737599 1448.77650993586 43.485 2 -0.8444758713337199 0.2615151171365364 1.0 ['SLC24A2|p.S126F|1|0.36|ENSG00000155886|chr9:19786490-19786490|G/A|missense_variant'] 110484 8879 TFFTSTWEV True PC9_epitope_Rep6 1116.51277627 1116.51166993586 44.096 2 -0.8444786458485788 0.2615151171365364 1.0 ['nc|ENSG00000171495|Q7Z745-2|MROH2B', 'ENSG00000171495|ENST00000399564|MROH2B'] 65670 10736 LSAPQKPQL True PC9_epitope_Rep5 980.5654805492 980.56438993586 46.288 2 -0.8444798815053859 0.2615151171365364 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 135804 11530 WNELHSSGAAR True PC9_epitope_Rep1 1226.57923312038 1226.57758490379 49.23 3 -0.8445128103396771 0.2615181724074363 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000461159.6_1_7:18330122-18868840:+|nuORF', 'HDAC9|p.G781Wfs*5|1|0.15|ENSG00000048052|chr7:18829186-18829187|-/T|frameshift_variant', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 57920 9029 LEGGIDPLRP True H1975_Epitope_Rep1 1065.58185888933 1065.5807699358602 39.636 2 -0.8445175232888763 0.2615181724074363 1.0 ['ENSG00000167771|ENST00000301459|RCOR2', 'ENST00000489217.1_1_11:63679764-63680410:-|nuORF'] 65683 20230 LSAQTREPRQW True PC9_epitope_Rep2 1370.7054962626598 1370.70385490379 83.232 3 -0.8445184493518012 0.2615181724074363 1.0 ['ENSG00000181234|ENST00000435159|TMEM132C'] 129025 6346 VQLTHCYCR True NCI_RA007_Epitope_Rep2 1121.5110195315299 1121.50992993586 29.29 2 -0.8445630710111595 0.2615570051049348 1.0 ['ENST00000357066.7_1_19:2071060-2071678:-|nuORF'] 125510 24331 VKAKRKKLI True H1975_Epitope_Rep3 1082.7651834152598 1082.76408993586 101.32 2 -0.8445883538770008 0.2615779473072233 1.0 ['DSP|p.E2033K|1|0.65|ENSG00000096696|chr6:7583359-7583359|G/A|missense_variant'] 19462 4246 ELNKPPLGP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 21.443 2 -0.8445889519603103 0.2615779473072233 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 84355 4845 PYYHFHDWR True NCI_RA007_Epitope_Rep4 1319.5835902248298 1319.5819349037902 25.074 3 -0.8446245030584635 0.26158470875163065 1.0 ['INSR|p.Q276H|1|0.63|ENSG00000171105|chr19:7184462-7184462|C/A|missense_variant'] 101089 10227 SLGIICHFC True H1975_Epitope_Rep2 991.46194408079 991.46084993586 44.343 2 -0.8446336127292831 0.26158470875163065 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'ENST00000468677.5_1_13:20599458-20605462:+|nuORF'] 128139 24632 VPLLPLTP True PC9_epitope_Rep1 848.53714054304 848.53604993586 99.622 2 -0.8446559819491042 0.26159517901453383 1.0 ['ENSG00000176715|ENST00000614302|ACSF3'] 85471 24746 QFKLLLVRIYC True NCI_RA007_Epitope_Rep5 1394.8108132783398 1394.8097099358602 102.67 2 -0.8446756135478801 0.26161916914788036 1.0 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 100720 10994 SLDSDFTFTL True H1975_Epitope_Rep2 1144.52882025696 1144.5277299358602 47.315 2 -0.8446905282669461 0.26161916914788036 1.0 ['ENSG00000117500|ENST00000370282|TMED5', 'nc|ENSG00000117500|Q9Y3A6-2|TMED5'] 102650 9339 SLWWLACPD True PC9_epitope_Rep1 1089.49535238405 1089.4942499358601 40.78 2 -0.8447146733430311 0.26161916914788036 1.0 ['ENST00000338560.11_1_17:16318878-16320981:+|nuORF'] 21768 16703 ERVKEDLEKV True PC9_epitope_Rep5 1243.67721582615 1243.67610993586 69.253 2 -0.8447344628749517 0.26161916914788036 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant'] 135016 14942 WDCSDYEDTEE True NCI_RA007_Epitope_Rep5 1390.4507061589 1390.44960993586 64.14 2 -0.844744539056678 0.26161916914788036 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7'] 65144 16120 LQNRRLFQSLH True PC9_epitope_Rep3 1410.7844152896998 1410.7827749037901 67.156 3 -0.8447601370406902 0.26162963803150385 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 63357 17111 LLTREISRHP True H1975_Epitope_Rep2 1220.69895433024 1220.6978499358602 71.091 2 -0.8448200066314415 0.2616401066182726 1.0 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF'] 58025 15983 LEHRGTLRTQ True H1975_Epitope_Rep3 1209.65781779425 1209.65617490379 66.936 3 -0.8448476482777445 0.26164315588005954 1.0 ['ENSG00000101493|ENST00000443185|ZNF516'] 82528 25508 PPRRGGVLLG True PC9_epitope_Rep5 1020.6192474575597 1020.61867496793 103.37 1 -0.8448620545828787 0.26164315588005954 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 139700 7303 YNKPRAKSKP True NCI_RA007_Epitope_Rep2 1187.6774906096698 1187.67583490379 33.027 3 -0.8448643610013186 0.26164315588005954 1.0 ['ENSG00000132855|ENST00000371129|ANGPTL3'] 57306 5631 LEAAGDKF True PC9_epitope_Rep6 849.42323298961 849.42212993586 29.744 2 -0.8448973078091381 0.26166780083928776 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 31057 11843 GATGSCQK True NCI_RA007_Epitope_Rep1 750.33303808622 750.3324849679301 50.048 1 -0.8449215508279077 0.2616924450997349 1.0 ['ENST00000399423.8_1_14:24711613-24711790:-|nuORF'] 19168 12869 ELHNELVVR True PC9_epitope_Rep6 1107.6036569630699 1107.60254993586 61.021 2 -0.8449976440352992 0.2617559080792186 1.0 ['ENST00000556438.6_1_14:55603944-55604055:+|nuORF'] 132516 5276 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep4 1029.44371111445 1029.4426099358602 26.998 2 -0.8450172886690545 0.2617559080792186 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 61831 4696 LLAVSHVG True NCI_RA007_Epitope_Rep3 794.46503823194 794.46394993586 25.416 2 -0.845053681994906 0.2617731280655496 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 102624 21694 SLWPPLVLIGI True PC9_epitope_Rep3 1206.7376312547399 1206.73652993586 88.739 2 -0.8450667999281964 0.2617731280655496 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'ENST00000487651.5_1_7:100457471-100457768:+|nuORF', 'ENST00000448342.5_1_7:100456529-100458660:+|nuORF', 'ENST00000475623.1_1_7:100456676-100458183:+|nuORF'] 42215 11662 IDSADRKRF True H1975_Epitope_Rep3 1106.58325587166 1106.5821499358601 49.993 2 -0.8450773937640026 0.2617731280655496 1.0 ['ENSG00000138175|ENST00000260746|ARL3'] 62264 10937 LLFLRDTK True NCI_RA007_Epitope_Rep5 1004.60186605792 1004.60076993586 48.708 2 -0.845150229797877 0.26181194448775924 1.0 ['ENSG00000228278|ENST00000431067|ORM2'] 18703 12213 ELALFFKGPGP True PC9_epitope_Rep2 1174.6386454894598 1174.63754993586 52.289 2 -0.8451696512575725 0.2618186972854207 1.0 ['ENST00000271332.3_1_1:109817722-109817794:+|nuORF'] 37429 5176 GVTGENLAK True NCI_RA007_Epitope_Rep4 887.4712458111899 887.47014993586 26.435 2 -0.84518809836172 0.2618186972854207 1.0 ['ALPK2|p.A906V|1|0.59|ENSG00000198796|chr18:58537470-58537470|G/A|missense_variant'] 75198 15774 NIDLLEGITGF True NCI_RA007_Epitope_Rep4 1190.6183039677 1190.61720993586 68.503 2 -0.8452305568667358 0.26182916111473364 1.0 ['EIF3K|p.M125I|1|0.12|ENSG00000178982|chr19:38632450-38632450|G/T|missense_variant'] 136188 24365 WRRRRRSISR True PC9_epitope_Rep2 1427.8446645608299 1427.8435699358602 99.286 2 -0.8452658929587334 0.26183220173212945 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5', 'ADAMTS5|p.G894Vfs*16|1|0.13|ENSG00000154736|chr21:26924165-26924165|C/-|frameshift_variant', 'ADAMTS5|p.A277Rfs*16|1|0.22|ENSG00000154736|chr21:26965563-26965563|C/-|frameshift_variant'] 135195 16757 WERPNFNIK True NCI_RA007_Epitope_Rep2 1202.6196413803798 1202.61854993586 69.914 2 -0.8452816224725723 0.26183220173212945 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 131833 18129 VTQRGHRR True NCI_RA007_Epitope_Rep1 1008.5689432201998 1008.56837496793 74.66 1 -0.845304925144299 0.26183220173212945 1.0 ['nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'ENSG00000033100|ENST00000035307|CHPF2'] 69066 7782 LTQPVRSGPVS True NCI_RA007_Epitope_Rep1 1139.62987171091 1139.6287699358602 34.261 2 -0.8453272263314742 0.2618531275247693 1.0 ['nc|ENSG00000068137|Q7Z736-4|PLEKHH3', 'ENST00000456950.6_1_17:40821512-40828020:-|nuORF', 'nc|ENSG00000068137|Q7Z736-2|PLEKHH3', 'ENST00000591490.5_1_17:40821740-40828722:-|nuORF', 'ENST00000592974.5_1_17:40825317-40826415:-|nuORF', 'nc|ENSG00000068137|Q7Z736-3|PLEKHH3', 'ENSG00000068137|ENST00000591022|PLEKHH3'] 82618 5378 PQGHGFHP True NCI_RA007_Epitope_Rep5 875.4038349577099 875.40272993586 27.376 2 -0.8453746456414037 0.2618531275247693 1.0 ['ENSG00000106526|ENST00000683684|ACTR3C', 'nc|ENSG00000106526|Q9C0K3-2|ACTR3C'] 129719 22879 VRPRPGTG True PC9_epitope_Rep3 838.47733425114 838.47622993586 93.27 2 -0.8453801615436973 0.2618629173989455 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 128140 24565 VPLLPLTP True PC9_epitope_Rep5 848.53714054304 848.53604993586 99.604 2 -0.8453940161867831 0.2618629173989455 1.0 ['ENSG00000176715|ENST00000614302|ACSF3'] 11298 18394 DEINRPRRILN True NCI_RA007_Epitope_Rep1 1394.7742445288197 1394.7725849037902 75.684 3 -0.8453946965891593 0.2618629173989455 1.0 ['nc|ENSG00000188107|Q5T1H1-4|EYS'] 66723 5625 LSLGTERAYK True PC9_epitope_Rep2 1136.6189726740397 1136.61733490379 27.021 3 -0.845484969909374 0.2618629173989455 1.0 ['ENST00000515682.5_1_4:8207046-8242679:+|nuORF', 'ENSG00000125089|ENST00000245105|SH3TC1', 'ENST00000508183.5_1_4:8230913-8237300:+|nuORF', 'ENST00000502669.5_1_4:8220037-8239209:+|nuORF'] 57350 6754 LEAFAHTDLS True NCI_RA007_Epitope_Rep1 1102.5294889632999 1102.52838993586 30.281 2 -0.8454904641360862 0.2618629173989455 1.0 ['ENSG00000132703|ENST00000255040|APCS'] 111865 8994 TINFQDGE True PC9_epitope_Rep3 922.4032258210199 922.40212993586 39.54 2 -0.8455504530404665 0.2618733789701943 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'TRPM6|p.P1293Qfs*21|1|0.08|ENSG00000119121|chr9:74762793-74762793|G/-|frameshift_variant', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6', 'nc|ENSG00000119121|Q9BX84-6|TRPM6', 'nc|ENSG00000119121|Q9BX84-5|TRPM6', 'nc|ENSG00000119121|Q9BX84-7|TRPM6'] 118941 10493 VADSLVIL True NCI_RA007_Epitope_Rep3 828.49566965388 828.49456993586 48.333 2 -0.845566417134188 0.261880128686631 1.0 ['ENSG00000196131|ENST00000341702|VN1R2'] 66946 2741 LSPCPQPTCP True H1975_Epitope_Rep2 1041.46233800361 1041.46124993586 14.591 2 -0.845598120835402 0.261880128686631 1.0 ['ENST00000333046.8_3_9:140086129-140086441:-|nuORF'] 83248 8038 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 35.856 2 -0.8456049039410571 0.261890589569161 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 101562 7931 SLLKIIKLQ True NCI_RA007_Epitope_Rep1 1054.7114165069 1054.71030993586 34.843 2 -0.8456986301899551 0.2618973385108132 1.0 ['ENSG00000164961|ENST00000318410|WASHC5'] 130404 12724 VSLNEQKPV True PC9_epitope_Rep6 1012.5553097883198 1012.55420993586 60.428 2 -0.8457115912067457 0.2618973385108132 1.0 ['ENSG00000198131|ENST00000687789|ZNF544'] 61760 10225 LLAHVARTR True NCI_RA007_Epitope_Rep1 1035.63014649443 1035.6290499358602 43.785 2 -0.8457696620405697 0.26193243013434614 1.0 ['nc|ENSG00000168237|Q8IVS8-6|GLYCTK', 'ENST00000489173.1_1_3:52325707-52327139:+|nuORF', 'nc|ENSG00000168237|Q8IVS8-3|GLYCTK', 'ENSG00000168237|ENST00000436784|GLYCTK'] 121357 5992 VEVKIEEP True NCI_RA007_Epitope_Rep1 941.5069626135698 941.50586993586 27.351 2 -0.845793815381098 0.26193243013434614 1.0 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 99511 15925 SIDNLPAQL True PC9_epitope_Rep1 969.51311062317 969.51200993586 66.065 2 -0.8458117130146506 0.26195706086586834 1.0 ['ENSG00000008311|ENST00000417368|AASS'] 18386 6132 EITGAGGK True NCI_RA007_Epitope_Rep2 731.38136817763 731.3808149679301 28.459 1 -0.8458606332493874 0.2619638074454065 1.0 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'SAMHD1|p.E417Kfs*6|1|0.22|ENSG00000101347|chr20:36911239-36911239|C/-|frameshift_variant', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 100491 17938 SLAQRWQP True PC9_epitope_Rep2 984.5141136826799 984.5130099358599 74.303 2 -0.8458625308823978 0.2619638074454065 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1'] 112682 11211 TLGDIDVAF True H1975_Epitope_Rep1 949.47566248529 949.47511496793 48.094 1 -0.8458748573564647 0.2619742659562408 1.0 ['SREBF2-PPAPDC1A|1|fusion'] 124553 16465 VGVPTRAR True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50808496793 70.092 1 -0.8459055660359366 0.2619810117613717 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 30938 9161 GARHHTQLI True PC9_epitope_Rep4 1031.5624608574299 1031.56136993586 42.83 2 -0.8459480330161946 0.2619810117613717 1.0 ['ENST00000469702.5_1_2:114462911-114480749:-|nuORF'] 137969 18645 YFLEMQEKLER True PC9_epitope_Rep5 1484.73335080328 1484.73169490379 76.743 3 -0.8459509432385539 0.2619914695838234 1.0 ['ENSG00000099308|ENST00000687212|MAST3', 'ENST00000608648.1_1_19:18220994-18239762:+|nuORF', 'nc|ENSG00000099308|O60307|MAST3'] 101867 7275 SLPLDELPS True NCI_RA007_Epitope_Rep1 969.50187723313 969.50078993586 32.288 2 -0.8459846876906073 0.26200192710990194 1.0 ['nc|ENSG00000163704|Q5FWE3-2|PRRT3', 'ENSG00000163704|ENST00000412055|PRRT3'] 80396 13685 PGIAAIALA True H1975_Epitope_Rep1 795.48543932335 795.48434993586 57.775 2 -0.8459988248695872 0.26201912858661 1.0 ['ENSG00000188133|ENST00000342743|TMEM215'] 56511 14883 LDFLIIDKHE True NCI_RA007_Epitope_Rep2 1241.6655885132898 1241.66448993586 62.567 2 -0.8460161929442864 0.26201912858661 1.0 ['ENST00000397042.7_1_20:37204556-37204643:+|nuORF'] 116734 11759 TVDLNRVLN True PC9_epitope_Rep5 1042.5771078620598 1042.5760099358602 50.229 2 -0.8460349677974777 0.26201912858661 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323', 'KRT31|p.A216S|1|0.37|ENSG00000094796|chr17:41395566-41395566|C/A|missense_variant'] 89269 9439 QVVQLEGLE True NCI_RA007_Epitope_Rep4 1013.5393253710098 1013.53822993586 43.167 2 -0.8460847922034836 0.26207209249603264 1.0 ['nc|ENSG00000172765|O94876-2|TMCC1', 'ENSG00000172765|ENST00000393238|TMCC1'] 13825 9881 DQLIETLHAVD True NCI_RA007_Epitope_Rep1 1252.62993128056 1252.62882993586 42.437 2 -0.8461385242261762 0.26212505490457233 1.0 ['CDH6|p.Q507E|1|0.12|ENSG00000113361|chr5:31317381-31317381|C/G|missense_variant'] 86330 10475 QIVSFYFKLFK True H1975_Epitope_Rep3 1418.7962087600197 1418.7951099358602 45.355 2 -0.8461555276562669 0.2621355096488991 1.0 ['ENSG00000111537|ENST00000229135|IFNG'] 131279 16739 VTFYPQDAP True PC9_epitope_Rep3 1036.4865615221597 1036.48546993586 69.525 2 -0.8462369303835652 0.262159443492059 1.0 ['ENSG00000128965|ENST00000617768|CHAC1'] 67612 4972 LSVLRPSQKT True PC9_epitope_Rep4 1127.66625721963 1127.6646149037902 25.731 3 -0.8462385568610107 0.262159443492059 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1', 'nc|ENSG00000138688|Q2LD37-5|BLTP1', 'ENST00000482114.1_1_4:123130334-123145991:+|nuORF'] 15856 4354 EDFMKLYNHLE True NCI_RA007_Epitope_Rep2 1437.6598515098497 1437.6582149037902 21.572 3 -0.8462566224091349 0.262159443492059 1.0 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM', 'FANCM|p.D696Tfs*8|1|0.16|ENSG00000187790|chr14:45170670-45170670|G/-|frameshift_variant'] 101364 6408 SLITVSAAK True PC9_epitope_Rep2 888.5280324113199 888.52692993586 30.056 2 -0.846259184668636 0.262159443492059 1.0 ['ENST00000474863.5_1_1:222885158-222885545:-|nuORF'] 59855 13866 LGFQKRWRK True PC9_epitope_Rep5 1217.71454482473 1217.7134499358601 58.356 2 -0.8462652870499293 0.262159443492059 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 114292 28266 TPPRKRKKIVV True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 118.07 3 -0.8462955665311609 0.2621698968604783 1.0 ['ENST00000563306.5_1_16:46729840-46730008:+|nuORF', 'ENST00000567000.2_1_16:46729456-46731494:+|nuORF', 'ENST00000575571.5_1_16:46728976-46731494:+|nuORF', 'ENSG00000091651|ENST00000219097|ORC6'] 100893 11975 SLETLGLWPV True NCI_RA007_Epitope_Rep1 1113.60701100801 1113.6059099358602 50.567 2 -0.8463272813940093 0.26217663559346044 1.0 ['ENST00000444521.6_1_1:2521013-2521196:+|nuORF'] 116193 11478 TSVQQWPA True PC9_epitope_Rep2 915.4450310633498 915.44392993586 49.468 2 -0.8463904643229166 0.26217663559346044 1.0 ['ENSG00000150457|ENST00000382592|LATS2'] 45195 8387 IPRDQSPSL True PC9_epitope_Rep2 1011.53490869691 1011.53380993586 37.632 2 -0.84648449348564 0.26220125518863246 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 123432 14624 VGNIWVCY True H1975_Epitope_Rep2 952.4476739156398 952.44656993586 61.411 2 -0.8465232460010017 0.26222215925994136 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 56665 13001 LDKDDDADY True H1975_Epitope_Rep2 1068.4247491112399 1068.42364993586 55.125 2 -0.8465294194159481 0.26222215925994136 1.0 ['ENSG00000148606|ENST00000372371|POLR3A'] 11711 5744 DHAIKVFQG True PC9_epitope_Rep3 1013.5294293936499 1013.52832993586 27.166 2 -0.8467032410990337 0.26226767905711695 1.0 ['nc|ENSG00000164304|Q8TC20-4|CAGE1'] 19085 13848 ELGEQIDNLQR True PC9_epitope_Rep3 1313.6575430107298 1313.65644993586 58.347 2 -0.8467050761926586 0.26226767905711695 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'ENSG00000109061|ENST00000226207|MYH1', 'MYH1|p.T1278Qfs*18|1|0.3|ENSG00000109061|chr17:10500660-10500660|G/-|frameshift_variant', 'MYH1|p.E1318Nfs*2|1|0.26|ENSG00000109061|chr17:10499006-10499006|C/-|frameshift_variant', 'GAS7-MYH1|1|fusion', 'ENSG00000109063|ENST00000583535|MYH3', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2'] 29656 6543 FVKWSCFWVG True NCI_RA007_Epitope_Rep3 1257.60048615893 1257.59938993586 32.782 2 -0.846713008131108 0.26226767905711695 1.0 ['ENST00000155926.8_1_2:12882275-12882671:+|nuORF'] 119304 11943 VALYQVHYEWW True NCI_RA007_Epitope_Rep4 1492.71393568804 1492.71282993586 52.939 2 -0.8467570241648725 0.2622848643671648 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'PIEZO2|p.N2125Tfs*10|1|0.09|ENSG00000154864|chr18:10697862-10697862|T/-|frameshift_variant', 'PIEZO2|p.S2477Lfs*18|1|0.26|ENSG00000154864|chr18:10681672-10681672|A/-|frameshift_variant'] 98395 24369 SFCSFFGG True PC9_epitope_Rep5 850.3319754570599 850.33086993586 98.77 2 -0.8467614536600317 0.2622848643671648 1.0 ['ENSG00000198736|ENST00000361871|MSRB1', 'ENST00000361871.7_2_16:1990815-1993322:-|nuORF'] 85761 7589 QHDKLNLGPAI True NCI_RA007_Epitope_Rep2 1204.6564208119198 1204.6553299358602 34.143 2 -0.8467664012606932 0.2622848643671648 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 67537 6101 LSTLRGRAR True NCI_RA007_Epitope_Rep5 1028.6203100867199 1028.61920993586 30.149 2 -0.8467939819316164 0.2623057637010071 1.0 ['ENSG00000162571|ENST00000379289|TTLL10', 'nc|ENSG00000162571|Q6ZVT0-2|TTLL10', 'nc|ENSG00000162571|Q6ZVT0-3|TTLL10'] 122304 14201 VGAYLPHAEL True PC9_epitope_Rep4 1068.56039516876 1068.55928993586 62.531 2 -0.8468173140951941 0.2623057637010071 1.0 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2'] 137607 5806 YEEVKQAGRY True H1975_Epitope_Rep2 1241.6040508858896 1241.6029499358601 27.323 2 -0.846873521929658 0.26232666185073444 1.0 ['nc|ENSG00000185813|Q99447-2|PCYT2', 'nc|ENSG00000185813|Q99447-4|PCYT2', 'ENSG00000185813|ENST00000538936|PCYT2', 'nc|ENSG00000185813|Q99447-3|PCYT2'] 58596 21919 LEQRHKHNK True PC9_epitope_Rep6 1188.6475874637197 1188.64594490379 97.214 3 -0.8468771081066014 0.26232666185073444 1.0 ['ENST00000468917.1_1_22:20103119-20104069:-|nuORF', 'ENST00000494641.1_1_22:20103119-20103621:-|nuORF', 'ENST00000480460.1_1_22:20103056-20103595:-|nuORF', 'ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A'] 66944 8501 LSPAWMPA True H1975_Epitope_Rep1 871.42621019507 871.42510993586 37.629 2 -0.8468859838091354 0.26234755881644733 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'nc|ENSG00000122678|Q9NP87-3|POLM'] 80227 13399 PGAKKSAK True PC9_epitope_Rep1 785.4759372688098 785.47484993586 56.402 2 -0.8468906946363572 0.26234755881644733 1.0 ['nc|ENSG00000163606|Q8TD46-1|CD200R1', 'ENSG00000163606|ENST00000308611|CD200R1'] 89846 22573 RARNEALRLKK True H1975_Epitope_Rep3 1353.8316998352896 1353.8300549037901 94.348 3 -0.846923468539181 0.2623580068553299 1.0 ['ENSG00000078814|ENST00000262873|MYH7B', 'nc|ENSG00000078814|A7E2Y1|MYH7B'] 112602 20018 TLERWYAI True PC9_epitope_Rep3 1050.54983048506 1050.5487299358601 82.247 2 -0.8470361759877573 0.2623610225904681 1.0 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR'] 113619 17463 TLVRSHPLYAT True PC9_epitope_Rep5 1256.6877209402 1256.68662993586 72.172 2 -0.8470580409784505 0.2623610225904681 1.0 ['ZNF761|p.G696Afs*77|1|0.12|ENSG00000160336|chr19:53456593-53456593|G/-|frameshift_variant'] 123109 16319 VGKKKRAN True NCI_RA007_Epitope_Rep4 899.5664836087099 899.56593496793 70.768 1 -0.8470707901463034 0.2623610225904681 1.0 ['ENST00000464470.1_1_13:32999202-32999613:-|nuORF'] 135997 22166 WQRLRSIIFC True PC9_epitope_Rep6 1320.7124962193998 1320.71138993586 98.203 2 -0.8471526533590629 0.26238563294904116 1.0 ['ENST00000512760.5_1_4:79841695-79860421:-|nuORF', 'ENSG00000163291|ENST00000512733|PAQR3', 'nc|ENSG00000163291|Q6TCH7-3|PAQR3', 'nc|ENSG00000163291|Q6TCH7-2|PAQR3'] 86840 11521 QLQGNVLL True PC9_epitope_Rep4 883.5127167003499 883.51160993586 52.078 2 -0.8472078767031593 0.26239607970881074 1.0 ['ENST00000522601.5_1_8:8086126-8093767:+|nuORF'] 57933 10101 LEGITAII True H1975_Epitope_Rep1 828.49566965388 828.49456993586 43.79 2 -0.847232434060924 0.26240652617267163 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 70911 19108 LYEWRNYGP True PC9_epitope_Rep2 1196.5614577979197 1196.56036993586 78.87 2 -0.8472853276361447 0.26240953959014884 1.0 ['ENSG00000130818|ENST00000253115|ZNF426'] 112827 5797 TLIMVTMLP True NCI_RA007_Epitope_Rep2 1017.56026113973 1017.55916993586 27.167 2 -0.8472882023312888 0.26240953959014884 1.0 ['ENST00000468323.5_1_3:149683870-149683927:-|nuORF'] 66423 14010 LSGLSWERSR True PC9_epitope_Rep5 1189.62036965637 1189.61926993586 58.907 2 -0.8473178384941753 0.26240953959014884 1.0 ['ENST00000299498.10_1_11:7694653-7694722:-|nuORF'] 16302 12898 EEFWLFCPLRW True H1975_Epitope_Rep1 1524.7223921967598 1524.72128993586 54.684 2 -0.8473276152675575 0.26241998527162524 1.0 ['ENST00000335281.8_1_14:52434561-52434765:+|nuORF'] 19613 10307 ELQQMRQQLPD True H1975_Epitope_Rep1 1384.6768985563199 1384.6758099358601 44.59 2 -0.8473998895745892 0.26244459235551526 1.0 ['ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 18423 15615 EIWKEDLS True PC9_epitope_Rep5 1018.4971262058599 1018.49602993586 65.074 2 -0.8474862937463197 0.262493804432486 1.0 ['ENSG00000113638|ENST00000337702|TTC33', 'ENST00000511730.2_1_5:40716249-40756023:-|nuORF'] 25041 19324 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 79.32 2 -0.8474869894035267 0.262493804432486 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 112603 19987 TLERWYAI True PC9_epitope_Rep5 1050.54983048506 1050.5487299358601 81.934 2 -0.8475352162770923 0.2625467316188966 1.0 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR'] 58495 11453 LEQEEKLKAK True H1975_Epitope_Rep1 1214.6870522338597 1214.6859499358602 49.034 2 -0.8475435775566391 0.2625571746180098 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'ENST00000471347.5_1_1:15654853-15671627:+|nuORF'] 29768 24416 FVPAWENVGSK True H1975_Epitope_Rep1 1232.6189726740397 1232.6178699358602 101.22 2 -0.8476120127549978 0.262592220224019 1.0 ['ENST00000297875.6_1_X:37985921-37986104:+|nuORF'] 53045 20783 KPMYRRWWEQF True H1975_Epitope_Rep1 1625.7925374452495 1625.79144993586 86.366 2 -0.8476177954799499 0.262592220224019 1.0 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 46594 16021 ITCRASQSI True PC9_epitope_Rep1 977.49641501321 977.49530993586 66.438 2 -0.8476426521341484 0.2626026621353724 1.0 ['nc|ENSG00000225523|A0A0A0MT36|IGKV6D-21', 'nc|ENSG00000211611|A0A0C4DH24|IGKV6-21', 'nc|ENSG00000251546|P04432|IGKV1D-39', 'nc|ENSG00000243466|P01602|IGKV1-5'] 44315 13595 ILDGESAP True PC9_epitope_Rep3 800.39159850816 800.39050993586 57.355 2 -0.8476836883072565 0.2626079569587994 1.0 ['ENSG00000144843|ENST00000357003|ADPRH', 'ENST00000471850.1_1_3:119298364-119306722:+|nuORF'] 130763 9247 VSYSWTAW True PC9_epitope_Rep2 998.4497820906199 998.44868993586 40.907 2 -0.8476916558831898 0.2626079569587994 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant'] 42774 20197 IENELIKFCRE True PC9_epitope_Rep1 1392.7071360554398 1392.7060299358602 82.517 2 -0.8476996577563998 0.2626079569587994 1.0 ['ENST00000470900.1_1_3:51423580-51426517:+|nuORF', 'ENSG00000145050|ENST00000528157|MANF'] 70821 5531 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep5 1442.6356288295895 1442.6345299358602 27.962 2 -0.8477348495302277 0.2626079569587994 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 82843 607 PRSSSLWIELC True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 3.4539 3 -0.8477423823400209 0.2626079569587994 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 106523 9735 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 45.083 2 -0.8477437202721986 0.2626079569587994 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 133535 25406 VWRIRQLLRR True PC9_epitope_Rep1 1394.8735050776197 1394.87240993586 102.69 2 -0.8477843670282263 0.2626079569587994 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 91723 19119 RKDKKKLRRLL True H1975_Epitope_Rep2 1452.9728847657198 1452.97123490379 79.359 3 -0.8478145688134394 0.2626079569587994 1.0 ['ENSG00000196284|ENST00000371459|SUPT3H', 'nc|ENSG00000196284|O75486-4|SUPT3H'] 113577 15182 TLVDIELI True PC9_epitope_Rep1 914.53244908542 914.53134993586 63.219 2 -0.8478353151802192 0.2626079569587994 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 140068 4250 YQKEIMERPP True H1975_Epitope_Rep2 1289.6438075228896 1289.64217490379 21.457 3 -0.8478867115708802 0.2626079569587994 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 25181 21156 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 89.539 2 -0.847998288699651 0.26263927625897243 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 31154 16144 GAVWFEAGVL True PC9_epitope_Rep3 1047.53893144819 1047.5378299358601 67.245 2 -0.848009381522424 0.26263927625897243 1.0 ['ENST00000371753.5_1_9:138901783-138902074:-|nuORF'] 23369 22168 EVRQFFRLFVP True PC9_epitope_Rep3 1436.7928547150798 1436.79174993586 90.553 2 -0.8480146174637849 0.26263927625897243 1.0 ['CCR6|p.S45F|1|0.34|ENSG00000112486|chr6:167136364-167136364|C/T|missense_variant'] 100548 17121 SLCCHCHS True PC9_epitope_Rep1 888.3040635404002 888.30296993586 70.68 2 -0.8480312063066051 0.2626459970269696 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 58682 22985 LERLYQRYFF True PC9_epitope_Rep5 1433.7455701694896 1433.74446993586 93.402 2 -0.8480330380892808 0.2626459970269696 1.0 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENSG00000173175|ENST00000462833|ADCY5'] 130632 21790 VSSVPDVF True PC9_epitope_Rep1 848.42798401688 848.42688993586 88.638 2 -0.8481145768244556 0.26266987542468856 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2', 'ARFGEF2|p.G444V|1|0.08|ENSG00000124198|chr20:48971260-48971260|G/T|missense_variant'] 66026 14419 LSEELQGLDQL True PC9_epitope_Rep6 1243.62959692739 1243.6284899358602 67.359 2 -0.8481377517767636 0.26266987542468856 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'nc|ENSG00000158773|P22415-2|USF1', 'ENST00000472217.1_1_1:161009712-161010126:-|nuORF'] 131601 8118 VTLMYLRFP True NCI_RA007_Epitope_Rep1 1138.6208872503398 1138.6192349037901 35.575 3 -0.8481407648875501 0.26266987542468856 1.0 ['OR6K2|p.S264P|1|0.44|ENSG00000196171|chr1:158699863-158699863|A/G|missense_variant'] 139875 7322 YPQWRRIH True H1975_Epitope_Rep1 1154.6097454030198 1154.60864993586 33.173 2 -0.848150126121991 0.26266987542468856 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 140972 15401 YSFYTFIL True PC9_epitope_Rep4 1052.52188440172 1052.5207899358602 67.171 2 -0.848188148730717 0.26266987542468856 1.0 ['HACD1|p.S189I|1|0.25|ENSG00000165996|chr10:17599329-17599329|C/A|missense_variant'] 59199 11461 LFDRISESY True H1975_Epitope_Rep2 1128.54513902744 1128.5440499358601 49.14 2 -0.8482666524493149 0.26267659466040033 1.0 ['ENSG00000166262|ENST00000299338|FAM227B'] 130683 9712 VSTPSQPL True PC9_epitope_Rep6 827.4388830537499 827.43778993586 47.757 2 -0.848271845539518 0.26267659466040033 1.0 ['ENSG00000162460|ENST00000375782|TMEM82'] 119832 18163 VDCVKKLL True PC9_epitope_Rep5 916.5415743004799 916.54046993586 74.873 2 -0.8482871433140955 0.26268259540255917 1.0 ['nc|ENSG00000165192|Q8WXH4-3|ASB11', 'nc|ENSG00000165192|Q8WXH4-2|ASB11', 'ENSG00000165192|ENST00000480796|ASB11'] 36186 9897 GVAVRVGGVI True NCI_RA007_Epitope_Rep3 925.5709002828098 925.56980993586 46.01 2 -0.8483460018563846 0.26268259540255917 1.0 ['ENST00000370351.8_1_20:61598972-61599257:+|nuORF'] 28211 10668 FRERHHLSRHM True H1975_Epitope_Rep1 1504.7582176252001 1504.7571299358601 45.993 2 -0.8484080028762014 0.26268259540255917 1.0 ['ENSG00000152784|ENST00000415738|PRDM8', 'nc|ENSG00000265763|Q96MN9-2|ZNF488', 'ENSG00000265763|ENST00000585316|ZNF488'] 31083 7999 GAVAHTGEALS True PC9_epitope_Rep4 1011.4985231881899 1011.4974299358599 38.218 2 -0.8484373146353316 0.26268259540255917 1.0 ['ENST00000479169.5_1_2:242177863-242181895:-|nuORF'] 14837 16306 DVVKVLSKTTE True H1975_Epitope_Rep1 1217.68671788069 1217.68617496793 68.078 1 -0.8484404019773062 0.26268259540255917 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 77867 14477 NVFLFVWYY True H1975_Epitope_Rep3 1249.6171817688898 1249.6160899358601 61.045 2 -0.8484540627314662 0.26268259540255917 1.0 ['CYBB|p.Y425*|1|0.29|ENSG00000165168|chrX:37805129-37805129|C/-|frameshift_variant', 'ENSG00000165168|ENST00000378588|CYBB'] 27410 5547 FLWKKYQPYK True PC9_epitope_Rep5 1399.7652429849097 1399.76359490379 26.342 3 -0.8485214709215402 0.2627317763623496 1.0 ['nc|ENSG00000188175|A8MVW5-2|HEPACAM2', 'ENSG00000188175|ENST00000394468|HEPACAM2', 'nc|ENSG00000188175|A8MVW5-3|HEPACAM2'] 92238 18349 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 80.354 2 -0.8485638135290776 0.2627317763623496 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 106481 5401 STLALSVAK True H1975_Epitope_Rep2 888.5280324113199 888.52692993586 25.807 2 -0.848702357360403 0.26278467396073657 1.0 ['ENST00000487233.1_1_2:217364074-217364125:+|nuORF', 'ENST00000427280.6_1_2:217364074-217364681:+|nuORF'] 92239 18435 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 80.695 2 -0.8487735570969052 0.26279510841872844 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 112943 11099 TLLLAQVTP True PC9_epitope_Rep1 954.57498260374 954.57388993586 47.579 2 -0.8487832530598926 0.2628018229682679 1.0 ['ENSG00000204548|ENST00000376314|DEFB121'] 22295 6794 ETDISVLEEPG True H1975_Epitope_Rep1 1187.55576328079 1187.5546699358601 31.176 2 -0.8487914938582437 0.2628018229682679 1.0 ['ENST00000394434.6_1_5:145523903-145524189:-|nuORF'] 119817 11679 VDANYNSSVL True PC9_epitope_Rep2 1080.5087535187201 1080.5076499358602 50.254 2 -0.8488366678679218 0.2628286773654864 1.0 ['ENSG00000214595|ENST00000356458|EML6', 'nc|ENSG00000214595|Q6ZMW3-2|EML6'] 60380 7745 LGTHWKLYS True H1975_Epitope_Rep3 1103.5763795860698 1103.5752899358602 34.773 2 -0.8488541618948033 0.2628286773654864 1.0 ['ENST00000319933.6_1_5:102594502-102611616:+|nuORF', 'ENST00000515669.5_1_5:102594747-102611616:+|nuORF', 'ENST00000510890.1_1_5:102595280-102611616:+|nuORF'] 122153 11444 VGAGHVAPVSP True PC9_epitope_Rep2 989.5294293936499 989.52832993586 49.34 2 -0.8488596410989228 0.2628286773654864 1.0 ['ENSG00000183779|ENST00000331569|ZNF703'] 74399 14095 NESGELVAI True PC9_epitope_Rep5 930.4658260775799 930.4652749679301 59.227 1 -0.8488648842871224 0.2628286773654864 1.0 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 136545 9683 WWFRWRLDRYV True NCI_RA007_Epitope_Rep1 1681.8629999635698 1681.8613649037902 41.665 3 -0.8488954905370102 0.2628286773654864 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 109080 7082 TALKDFHKKQI True H1975_Epitope_Rep2 1327.76122023363 1327.75957490379 32.172 3 -0.848922521057896 0.2628286773654864 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 57212 19339 LDVSVFSCVI True PC9_epitope_Rep4 1080.552532907 1080.5514299358601 82.496 2 -0.8489688122831539 0.2628286773654864 1.0 ['ENST00000479950.5_1_6:41035018-41035069:-|nuORF'] 31022 11854 GASRNPERPLR True H1975_Epitope_Rep3 1251.67961586799 1251.6785099358601 50.744 2 -0.8489934252622234 0.2628286773654864 1.0 ['ENST00000463441.5_1_7:150020319-150023055:+|nuORF'] 2167 5319 AELRVPSP True H1975_Epitope_Rep2 867.48141657207 867.48030993586 25.512 2 -0.8490170636197929 0.2628495414921318 1.0 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 6251 5362 APQRLPQT True PC9_epitope_Rep5 909.5032146458099 909.50210993586 25.64 2 -0.8490294039175978 0.2628495414921318 1.0 ['nc|ENSG00000120341|Q96JE7-2|SEC16B', 'ENSG00000120341|ENST00000308284|SEC16B', 'ENST00000464428.2_1_1:177930716-177937161:-|nuORF', 'ENST00000466953.6_1_1:177929778-177937161:-|nuORF'] 64773 12195 LQAHVLGGTL True PC9_epitope_Rep3 1007.57637958607 1007.57528993586 51.94 2 -0.8492049588657612 0.26291657822118447 1.0 ['ENSG00000173621|ENST00000309602|LRFN4'] 37386 24221 GVSPLRRWIQR True PC9_epitope_Rep3 1366.79458605058 1366.7934899358602 98.463 2 -0.8492460333767522 0.26291956755532914 1.0 ['ENSG00000198854|ENST00000368775|C1orf68'] 66690 5263 LSLDDAVTDP True NCI_RA007_Epitope_Rep2 1044.49752012868 1044.49642993586 25.094 2 -0.8492666851159093 0.26291956755532914 1.0 ['ENST00000372699.7_1_1:40997363-40998823:+|nuORF'] 116159 7939 TSTSLSRLK True NCI_RA007_Epitope_Rep3 991.56620882519 991.56510993586 38.337 2 -0.8492832667763469 0.26291956755532914 1.0 ['ENST00000585825.1_1_17:58888238-58888406:+|nuORF'] 66470 5702 LSGVHLLPV True NCI_RA007_Epitope_Rep3 933.5647522732099 933.56364993586 29.405 2 -0.8492972641764771 0.2629441480705826 1.0 ['ENST00000587885.1_1_19:13263929-13264031:+|nuORF'] 31096 11036 GAVERPLSL True NCI_RA007_Epitope_Rep4 940.5341804209199 940.53308993586 49.323 2 -0.8494337212796005 0.26298287816612426 1.0 ['ENSG00000107371|ENST00000327304|EXOSC3', 'nc|ENSG00000107371|Q9NQT5-2|EXOSC3'] 112456 8462 TLDFPPAATP True H1975_Epitope_Rep3 1028.5178616504397 1028.51676993586 37.533 2 -0.8494463285386935 0.26302160716559836 1.0 ['PCDH1|p.S1217L|1|0.24|ENSG00000156453|chr5:141854106-141854106|G/A|missense_variant'] 120451 15974 VEERDFIMP True PC9_epitope_Rep2 1134.5379454720198 1134.5368499358601 66.697 2 -0.8495094060932641 0.26303874126269916 1.0 ['ENST00000436747.5_1_2:242681986-242688401:+|nuORF', 'nc|ENSG00000180902|Q8N465-2|D2HGDH', 'nc|ENSG00000180902|Q8N465-3|D2HGDH', 'ENSG00000180902|ENST00000321264|D2HGDH'] 86966 15045 QLWNTFWILRR True PC9_epitope_Rep1 1531.8412018898298 1531.83955490379 62.689 3 -0.849533853108407 0.26303874126269916 1.0 ['ENST00000368173.7_1_1:158068274-158068373:+|nuORF'] 114659 4388 TQENLNQQYQK True H1975_Epitope_Rep3 1392.66335666716 1392.66224993586 21.999 2 -0.8495539013578818 0.26303874126269916 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 96769 6858 SAPGLLAAAP True H1975_Epitope_Rep2 866.4861675993399 866.48506993586 31.297 2 -0.8495982366306625 0.2630491687301026 1.0 ['ENST00000476803.1_1_1:2125492-2125609:-|nuORF'] 15582 10229 EAQRKNPMFK True NCI_RA007_Epitope_Rep2 1247.6444762292297 1247.6433699358602 44.379 2 -0.8496696925011421 0.263059595902428 1.0 ['nc|ENSG00000134812|P27352-2|CBLIF', 'ENSG00000134812|ENST00000257248|CBLIF'] 14001 21649 DREELNYWI True PC9_epitope_Rep3 1236.5775017848798 1236.57640993586 88.573 2 -0.8499116295794019 0.26318991496767075 1.0 ['nc|ENSG00000079102|Q06455-6|RUNX1T1', 'nc|ENSG00000079102|Q06455-5|RUNX1T1', 'RUNX1T1|p.H434Qfs*17|1|0.2|ENSG00000079102|chr8:91975951-91975952|-/T|frameshift_variant', 'nc|ENSG00000079102|Q06455-4|RUNX1T1', 'nc|ENSG00000079102|Q06455-2|RUNX1T1', 'nc|ENSG00000079102|Q06455|RUNX1T1', 'nc|ENSG00000079102|Q06455-3|RUNX1T1', 'ENSG00000079102|ENST00000436581|RUNX1T1'] 43003 7116 IETDKEYYTV True H1975_Epitope_Rep1 1259.59214878951 1259.5910499358602 32.397 2 -0.8499137983032221 0.26318991496767075 1.0 ['ENSG00000162434|ENST00000342505|JAK1'] 25044 19585 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 80.358 2 -0.8499230639346316 0.26318991496767075 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 47006 5871 ITQSTEIR True NCI_RA007_Epitope_Rep1 946.5083595959 946.50726993586 26.889 2 -0.8501595372622407 0.2633008445205189 1.0 ['ENST00000446618.1_1_22:19245879-19246326:+|nuORF'] 47049 12942 ITRYFLCLQLR True PC9_epitope_Rep2 1424.7962258433597 1424.7951299358601 55.076 2 -0.8501951034518345 0.2633008445205189 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 30908 10927 GAQKMCRH True H1975_Epitope_Rep1 929.43237528801 929.43126993586 46.993 2 -0.8502136289167428 0.2633008445205189 1.0 ['ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 74028 4219 NDIHEGISE True PC9_epitope_Rep4 1012.44615326216 1012.44504993586 22.604 2 -0.850273720565969 0.2633008445205189 1.0 ['GHR|p.T408I|1|0.14|ENSG00000112964|chr5:42718730-42718730|C/T|missense_variant'] 70490 21359 LVVPPTDAPV True PC9_epitope_Rep2 1006.5698972232999 1006.56880993586 87.626 2 -0.8502743386177564 0.2633008445205189 1.0 ['ENSG00000110799|ENST00000261405|VWF'] 138076 4740 YGFLWRWFDEI True PC9_epitope_Rep6 1530.7295857521797 1530.7279349037901 25.653 3 -0.8502903074456831 0.2633008445205189 1.0 ['ENSG00000108733|ENST00000225873|PEX12'] 61779 16319 LLALLDAGTL True PC9_epitope_Rep4 998.6011973515799 998.60010993586 70.733 2 -0.8503265953095506 0.2633008445205189 1.0 ['ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000528236.5_1_11:45949456-45950393:+|nuORF', 'ENST00000530437.5_1_11:45947935-45950393:+|nuORF'] 18558 18719 EKMAVLHCALY True PC9_epitope_Rep3 1276.63080031104 1276.62916490379 77.228 3 -0.8503524557341458 0.2633008445205189 1.0 ['GSAP|p.A429V|1|0.09|ENSG00000186088|chr7:77355265-77355265|G/A|missense_variant'] 102075 13310 SLRELNTVP True PC9_epitope_Rep1 1027.56620882519 1027.5651099358602 56.059 2 -0.8504018517661805 0.2633008445205189 1.0 ['nc|ENSG00000082512|O00463-3|TRAF5', 'ENSG00000082512|ENST00000261464|TRAF5', 'nc|ENSG00000082512|O00463-2|TRAF5', 'ENST00000462410.5_1_1:211526581-211529879:+|nuORF'] 80011 8919 PFEIVWGMRRP True NCI_RA007_Epitope_Rep5 1386.7230609030998 1386.7219699358602 40.969 2 -0.8504041354242536 0.2633008445205189 1.0 ['ENST00000488457.1_1_2:25600201-25602432:-|nuORF'] 86316 21409 QITTDITPE True PC9_epitope_Rep4 1016.5026055091199 1016.5020749679301 90.523 1 -0.8504668393082337 0.2633008445205189 1.0 ['nc|ENSG00000073712|Q96AC1-2|FERMT2', 'ENSG00000073712|ENST00000341590|FERMT2', 'nc|ENSG00000073712|Q96AC1-3|FERMT2'] 45978 14127 ISESIKELQFY True H1975_Epitope_Rep3 1355.6972825643898 1355.69618993586 59.669 2 -0.8504902808544835 0.2633008445205189 1.0 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 19366 11815 ELLMAMEKV True PC9_epitope_Rep2 1062.54533935158 1062.54424993586 50.777 2 -0.8505352163411964 0.263321686729945 1.0 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1'] 17109 9460 EGLTDVIRDVP True H1975_Epitope_Rep1 1212.6350166609998 1212.6339099358602 41.305 2 -0.8505588154640467 0.263321686729945 1.0 ['ENSG00000155034|ENST00000382368|FBXL18'] 46906 12546 ITLWVYVYVDP True PC9_epitope_Rep5 1366.71728973298 1366.71565490379 53.257 3 -0.8505720148991588 0.2633283824881533 1.0 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 136601 5140 WWNRMSNRFRK True NCI_RA007_Epitope_Rep3 1579.7942687807497 1579.79263490379 27.211 3 -0.850575593371217 0.2633283824881533 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 34620 5982 GPWQHHQPWQR True PC9_epitope_Rep1 1455.6908492580299 1455.68920490379 27.824 3 -0.8506108907488903 0.26333880276111804 1.0 ['ENST00000353332.9_1_3:9729515-9730718:+|nuORF', 'ENST00000447144.5_1_3:9714379-9730718:+|nuORF'] 34739 17507 GQEVAIKQI True PC9_epitope_Rep4 984.5603951687599 984.55928993586 75.345 2 -0.8506356813256182 0.26334474272297814 1.0 ['ENSG00000180370|ENST00000327134|PAK2'] 119216 25858 VAKRTLGG True PC9_epitope_Rep2 800.4868363056798 800.48628496793 105.22 1 -0.8506401267144118 0.26334474272297814 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 18032 20586 EIERDLRRSLP True H1975_Epitope_Rep2 1382.7630111387798 1382.7613649037899 85.277 3 -0.8506777101256342 0.26334474272297814 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 37351 21145 GVSGQRCD True PC9_epitope_Rep5 820.3497507795199 820.3492049679301 86.394 1 -0.8506867193454509 0.26334474272297814 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4', 'LAMB4|p.R1160S|1|0.12|ENSG00000091128|chr7:108055909-108055909|G/T|missense_variant'] 90460 19167 REKILVKKPWR True H1975_Epitope_Rep2 1451.9088875268299 1451.90725490379 79.555 3 -0.8506941358832812 0.26334474272297814 1.0 ['ENST00000495270.1_1_9:130699195-130699321:-|nuORF'] 110561 8219 TFQHNFLTRMK True NCI_RA007_Epitope_Rep2 1421.7237891790899 1421.72215490379 36.608 3 -0.8506958522612562 0.26334474272297814 1.0 ['CON__Q3SZH5'] 129971 11862 VRVRGSGV True NCI_RA007_Epitope_Rep2 828.4929843152798 828.49188993586 50.743 2 -0.850698279107866 0.26335143697669156 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 85760 7056 QHDKLNLGPAI True H1975_Epitope_Rep2 1204.6564208119198 1204.6553299358602 32.067 2 -0.8507068384599665 0.26335143697669156 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 117568 5093 TVSKISVP True NCI_RA007_Epitope_Rep1 829.49091862661 829.48982993586 23.896 2 -0.8507333122562656 0.26336185559719966 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 58353 7124 LENEKVKKQLA True NCI_RA007_Epitope_Rep3 1298.7558005000199 1298.75470993586 35.143 2 -0.8508608797267826 0.2634355377043616 1.0 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-3|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-4|TAX1BP1'] 130866 7594 VTCWHRWK True NCI_RA007_Epitope_Rep2 1114.54945364558 1114.5483499358602 34.162 2 -0.8508702569551789 0.2634355377043616 1.0 ['ITGA4|p.G145W|1|0.27|ENSG00000115232|chr2:181475165-181475165|G/T|missense_variant'] 94803 20463 RSPRGILG True PC9_epitope_Rep6 854.5086343794198 854.50752993586 91.425 2 -0.8508900572945677 0.2634355377043616 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 28338 4795 FRSATTSGAPG True PC9_epitope_Rep4 1050.50942222506 1050.50832993586 25.019 2 -0.8509019577516882 0.26344595454609737 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 18581 9410 EKQIWVEKYY True NCI_RA007_Epitope_Rep2 1384.7027022979998 1384.70160993586 41.213 2 -0.8509769449748197 0.26354122472069014 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 84974 7368 QEERRWNKRT True NCI_RA007_Epitope_Rep1 1401.7225433091298 1401.72088490379 32.654 3 -0.8509964856024347 0.26355163977316115 1.0 ['ENSG00000164754|ENST00000297338|RAD21'] 132040 10070 VTTASIRP True PC9_epitope_Rep3 843.48141657207 843.48030993586 43.688 2 -0.8510427462189942 0.26355460022060695 1.0 ['nc|ENSG00000122367|O75112-3|LDB3', 'nc|ENSG00000122367|O75112-2|LDB3', 'ENSG00000122367|ENST00000361373|LDB3', 'nc|ENSG00000122367|O75112-7|LDB3'] 55672 17681 LALEAEIRTLK True PC9_epitope_Rep3 1255.74998684359 1255.74888993586 73.205 2 -0.8510461215628446 0.26355460022060695 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 65712 8616 LSCEISLLKSE True NCI_RA007_Epitope_Rep1 1220.63223977968 1220.63114993586 37.515 2 -0.8510629391883446 0.26355460022060695 1.0 ['nc|ENSG00000042813|Q9BS86-2|ZPBP', 'ENSG00000042813|ENST00000046087|ZPBP'] 118797 13584 VAAEPYLYREA True NCI_RA007_Epitope_Rep4 1280.6401020414398 1280.63900993586 59.458 2 -0.8510897035370528 0.26356797420741535 1.0 ['ENSG00000175029|ENST00000309035|CTBP2'] 61568 22582 LKKHQIIHLE True PC9_epitope_Rep6 1257.7557409303697 1257.75409490379 99.889 3 -0.8511043181811744 0.26356797420741535 1.0 ['nc|ENSG00000204604|Q5VIY5-2|ZNF468', 'ENSG00000204604|ENST00000595646|ZNF468'] 2661 10956 AESLSNLHLKE True H1975_Epitope_Rep1 1239.6459156978701 1239.6448099358602 47.106 2 -0.8511874423230528 0.26356797420741535 1.0 ['ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-2|DDX19B'] 110506 19447 TFIIQAEANNV True PC9_epitope_Rep4 1218.6244519773 1218.62334993586 82.917 2 -0.8512215654894054 0.26356797420741535 1.0 ['nc|ENSG00000173612|Q5T6X5-2|GPRC6A', 'nc|ENSG00000173612|Q5T6X5-3|GPRC6A', 'ENSG00000173612|ENST00000310357|GPRC6A'] 111731 7494 TIGVGTCDER True H1975_Epitope_Rep1 1049.4811588718899 1049.48006993586 33.822 2 -0.851225300448709 0.26357838770344605 1.0 ['HMGCLL1|p.P256Cfs*16|1|0.08|ENSG00000146151|chr6:55495510-55495538|CTTTCCAACATTCTTTTCATACTTCCTGG/-|frameshift_variant'] 34050 18931 GLVLSLEEQL True PC9_epitope_Rep5 1099.61249031127 1099.6113899358602 77.841 2 -0.851295347318144 0.2635888009049774 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 125556 3640 VKKHKKKRVV True PC9_epitope_Rep3 1248.85064437472 1248.84954993586 19.114 2 -0.8513440023314894 0.26361335388357066 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 45757 6213 ISAGGYIK True PC9_epitope_Rep5 807.44905381463 807.44794993586 28.879 2 -0.8513810689250167 0.26362376629620204 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 9793 19086 AYKFQRKRRHK True NCI_RA007_Epitope_Rep2 1516.8851323904798 1516.88402993586 79.096 2 -0.851450900705415 0.26365127393037924 1.0 ['ENSG00000214376|ENST00000409977|VSTM5'] 22533 17348 ETHHWHDYQY True H1975_Epitope_Rep2 1414.5690623595 1414.5679699358602 72.024 2 -0.8514658425148346 0.26365127393037924 1.0 ['ENST00000607742.5_1_6:158538757-158579378:-|nuORF', 'nc|ENSG00000122335|Q96JX3-2|SERAC1', 'ENSG00000122335|ENST00000647468|SERAC1'] 85532 7225 QGARPPLL True NCI_RA007_Epitope_Rep4 850.50248636982 850.50138993586 34.423 2 -0.8514742441093033 0.26365127393037924 1.0 ['ENST00000467237.5_1_7:150776633-150777020:-|nuORF'] 68035 10903 LTDKHQSI True PC9_epitope_Rep3 940.4977949122001 940.49668993586 46.92 2 -0.8514965517781105 0.26365127393037924 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 14450 4469 DTEKSRFFRFC True NCI_RA007_Epitope_Rep2 1434.6714192530599 1434.67032993586 22.017 2 -0.8515290826570198 0.26366168507076504 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 56555 12472 LDGPYFHPV True PC9_epitope_Rep4 1043.50763131991 1043.50652993586 55.78 2 -0.8515814955870699 0.2636720959167515 1.0 ['FER1L6|p.G1497V|1|0.16|ENSG00000214814|chr8:124091521-124091521|G/T|missense_variant'] 84321 5681 PYSSQLSSL True PC9_epitope_Rep6 980.48147614172 980.48036993586 29.967 2 -0.8516207641432615 0.2637070549978793 1.0 ['ENST00000513092.1_1_4:24582564-24586076:-|nuORF'] 43111 5448 IEYEYKPN True NCI_RA007_Epitope_Rep3 1054.49712620586 1054.4960299358602 28.442 2 -0.8516402422614563 0.2637070549978793 1.0 ['CNRIP1|p.C147Y|1|0.06|ENSG00000119865|chr2:68293917-68293917|C/T|missense_variant'] 19264 13614 ELKGFNLNP True PC9_epitope_Rep3 1030.54474510462 1030.54364993586 57.43 2 -0.8517941557317615 0.263734554810982 1.0 ['ENSG00000088356|ENST00000202017|PDRG1'] 41746 12052 IANITHSTI True PC9_epitope_Rep5 968.52909504048 968.52798993586 51.352 2 -0.8518101120751107 0.263734554810982 1.0 ['TAS2R41|p.F119I|1|0.12|ENSG00000221855|chr7:143478227-143478227|T/A|missense_variant'] 55517 20562 LAGNRIVEIL True PC9_epitope_Rep1 1096.6604435631998 1096.65934993586 83.904 2 -0.8518111626769626 0.263734554810982 1.0 ['nc|ENSG00000139263|Q6UXM1-2|LRIG3', 'ENSG00000139263|ENST00000320743|LRIG3'] 135760 21388 WMAWCVAA True NCI_RA007_Epitope_Rep5 936.3986155482398 936.39750993586 89.33 2 -0.8518333810412623 0.263734554810982 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4'] 93866 8015 RRELWFWWRGW True H1975_Epitope_Rep1 1676.8476842525997 1676.84602490379 35.774 3 -0.851852239835292 0.2637449635965222 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 139931 16258 YQAGSLCLA True H1975_Epitope_Rep3 924.43750315476 924.43640993586 67.993 2 -0.8519111300713696 0.26374791484067966 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'nc|ENSG00000138759|Q86XX4-5|FRAS1', 'nc|ENSG00000138759|Q86XX4-4|FRAS1', 'nc|ENSG00000138759|Q86XX4-6|FRAS1'] 20199 13480 ENILWEYFKNK True H1975_Epitope_Rep1 1482.7507151195794 1482.74960993586 56.968 2 -0.8519157582965927 0.26374791484067966 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 75877 8814 NLQLNQETEAI True NCI_RA007_Epitope_Rep4 1271.63574493699 1271.6346499358601 40.713 2 -0.8519220913900751 0.26374791484067966 1.0 ['nc|ENSG00000165983|Q96BW5-2|PTER', 'ENSG00000165983|ENST00000535784|PTER'] 36738 9176 GVKGAKIK True PC9_epitope_Rep3 799.5279728416699 799.52686993586 40.235 2 -0.851981235222788 0.2637508658345231 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 102285 8167 SLSLSDLLY True NCI_RA007_Epitope_Rep3 1009.53317736141 1009.53208993586 39.244 2 -0.8520127908913623 0.2637508658345231 1.0 ['GPR65|p.E158Ffs*25|1|0.04|ENSG00000140030|chr14:88011317-88011318|-/CTTTATTCCAAGTATAA|frameshift_variant', 'GPR65|p.Q318Kfs*16|1|0.18|ENSG00000140030|chr14:88011799-88011799|C/-|frameshift_variant', 'ENSG00000140030|ENST00000267549|GPR65'] 70685 17366 LWKQWRESL True PC9_epitope_Rep5 1244.6665915727997 1244.66494490379 71.798 3 -0.8520202931198809 0.2637508658345231 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 81457 11059 PLFRSKEDP True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 47.856 2 -0.8520430493710364 0.26375754491610476 1.0 ['ENSG00000116685|ENST00000376572|KIAA2013'] 100908 10942 SLEYNFERK True PC9_epitope_Rep1 1184.5825871653199 1184.5814899358602 46.976 2 -0.8521297643811269 0.26375754491610476 1.0 ['nc|ENSG00000132872|Q9H2B2-2|SYT4', 'ENSG00000132872|ENST00000255224|SYT4'] 66936 10952 LSNVLELGWE True H1975_Epitope_Rep1 1158.5920892198599 1158.59098993586 47.092 2 -0.8521927933417206 0.2637820875268574 1.0 ['ENST00000462680.5_1_1:153955110-153955269:-|nuORF'] 82890 12082 PRYRKRLR True PC9_epitope_Rep4 1143.71012815063 1143.7090299358601 54.277 2 -0.8522211628878839 0.26379249416919925 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3'] 29051 20120 FTFFDVQKTKY True PC9_epitope_Rep4 1422.7183523621397 1422.71724993586 85.526 2 -0.8522292328085542 0.2638170355921183 1.0 ['ENSG00000109066|ENST00000335464|TMEM104', 'nc|ENSG00000109066|Q8NE00-2|TMEM104'] 125554 4623 VKKHKKKRVV True PC9_epitope_Rep1 1248.85064437472 1248.84954993586 22.654 2 -0.852290743721818 0.26384157632125743 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 65980 4903 LSDWRNNTEYR True NCI_RA007_Epitope_Rep2 1452.6745900572 1452.67294490379 23.693 3 -0.8523146164422485 0.26385198168146096 1.0 ['ENSG00000138411|ENST00000644978|HECW2'] 20303 9908 ENTLQCPKTPL True NCI_RA007_Epitope_Rep1 1242.6278231055799 1242.62672993586 42.543 2 -0.8523681229464626 0.26389065569831377 1.0 ['ENSG00000196233|ENST00000421806|LCOR'] 132422 19006 VVARICEPI True PC9_epitope_Rep5 998.5582869937799 998.55718993586 78.134 2 -0.8524091622387707 0.26392932862190815 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 128451 19008 VPSDRLALL True PC9_epitope_Rep2 982.58113061334 982.58002993586 78.479 2 -0.8525194934917849 0.2639642695612845 1.0 ['ENST00000439220.6_1_15:75074475-75090608:+|nuORF', 'ENST00000569462.5_1_15:75075012-75090608:+|nuORF'] 135476 15991 WIFWKTWIFWK True NCI_RA007_Epitope_Rep2 1639.8703767597897 1639.86926993586 66.918 2 -0.8525238775445849 0.2639642695612845 1.0 ['nc|ENSG00000288642|P51861|CDR1'] 135639 375 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 2.0813 3 -0.8526500126375759 0.2639850750487605 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 40009 10402 HPQKPIRLP True PC9_epitope_Rep2 1084.6505475858398 1084.64944993586 45.334 2 -0.8526578825231649 0.2639850750487605 1.0 ['ENST00000337929.7_1_16:27413553-27413916:+|nuORF'] 83893 18232 PVPRWLLLLP True PC9_epitope_Rep1 1202.7539500252199 1202.75230490379 74.92 3 -0.8527290912527196 0.2639954773514239 1.0 ['ENST00000573823.5_1_17:55055520-55064652:+|nuORF', 'ENST00000571345.5_1_17:55055520-55072276:+|nuORF', 'ENST00000571898.5_1_17:55055520-55072831:+|nuORF', 'nc|ENSG00000121064|Q9HB40-2|SCPEP1', 'ENSG00000121064|ENST00000262288|SCPEP1'] 31151 6086 GAVTLGIG True NCI_RA007_Epitope_Rep5 686.3962899657799 686.39574496793 30.091 1 -0.8528501738272267 0.264104810899429 1.0 ['ENSG00000204006|ENST00000371759|C1orf185'] 102150 21055 SLRREDRLLQR True PC9_epitope_Rep6 1440.82734273084 1440.82570490379 93.81 3 -0.8528913743709877 0.2641256112383052 1.0 ['ENSG00000255690|ENST00000539664|TRIL'] 28530 12906 FSEGRARWLMP True H1975_Epitope_Rep3 1348.67102533024 1348.6699299358602 54.87 2 -0.8529110296791356 0.2641256112383052 1.0 ['ENST00000451915.1_1_20:54963550-54967251:-|nuORF', 'ENST00000395914.5_1_20:54961549-54967234:-|nuORF'] 9419 13857 AVTRHSPSI True PC9_epitope_Rep3 966.5246783663799 966.52358993586 58.381 2 -0.8530192105363259 0.2641322781232335 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 57748 11784 LEENQRSYKQK True PC9_epitope_Rep3 1421.72629127689 1421.72464490379 50.344 3 -0.8530284765984785 0.2641322781232335 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 60018 11053 LGKKAAGI True PC9_epitope_Rep1 756.4857736765199 756.48466993586 47.404 2 -0.8530601645519035 0.2641456107625346 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 58368 8143 LENKIQDWYDK True NCI_RA007_Epitope_Rep1 1450.70924423042 1450.70814993586 35.673 2 -0.8530706633119682 0.2641456107625346 1.0 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 45397 5132 IQENHIKSI True NCI_RA007_Epitope_Rep1 1080.5927579262 1080.5916699358602 24.044 2 -0.8530729195197544 0.2641456107625346 1.0 ['nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant'] 142392 11813 YYELWWFWLLW True PC9_epitope_Rep2 1703.8176724805896 1703.81602490379 50.769 3 -0.853078065487214 0.2641456107625346 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 135936 15107 WPWLRWWQELW True NCI_RA007_Epitope_Rep1 1684.83030285296 1684.82920993586 62.832 2 -0.8531242729004425 0.2641560093266445 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 86262 6605 QIQEDKKHEEA True NCI_RA007_Epitope_Rep2 1353.6524576302902 1353.6513699358602 30.301 2 -0.8531640472666072 0.26416640759686855 1.0 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C', 'JMJD1C|p.T1978Pfs*9|1|0.06|ENSG00000171988|chr10:63193082-63193083|-/GGTGACTGGG|frameshift_variant'] 18243 10277 EIPGRWITR True H1975_Epitope_Rep1 1126.6247267608198 1126.6236299358602 44.474 2 -0.853245524771597 0.2642154646167759 1.0 ['nc|ENSG00000064300|P08138-2|NGFR', 'ENSG00000064300|ENST00000172229|NGFR'] 26081 7024 FGNECLNKMHQ True PC9_epitope_Rep3 1319.5750763400702 1319.57344490379 32.028 3 -0.8532479969241756 0.2642154646167759 1.0 ['ENSG00000176108|ENST00000325167|CHMP6'] 25046 19949 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 81.802 2 -0.8533119768661493 0.26426825304865126 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 117439 14564 TVQDVLETYQK True NCI_RA007_Epitope_Rep5 1322.67179609254 1322.67068993586 62.693 2 -0.8533662755690666 0.2642895487808324 1.0 ['POMK|p.A324V|1|0.51|ENSG00000185900|chr8:43122795-43122795|C/T|missense_variant'] 41296 24751 HVSLPLHA True NCI_RA007_Epitope_Rep1 872.48683630568 872.48572993586 102.48 2 -0.853373364705156 0.2642895487808324 1.0 ['nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF', 'ENSG00000163867|ENST00000357182|ZMYM6'] 24464 13860 FADQHVEIP True PC9_epitope_Rep2 1054.5083595959 1054.5072699358602 58.596 2 -0.8533805847404672 0.2642895487808324 1.0 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'nc|ENSG00000164347|Q969S9-5|GFM2', 'nc|ENSG00000164347|Q969S9-4|GFM2'] 19248 3893 ELKAELNSDKK True NCI_RA007_Epitope_Rep2 1273.68778050985 1273.68613490379 19.778 3 -0.8533889103046887 0.2642895487808324 1.0 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant', 'ENST00000473606.1_1_22:29755773-29763232:-|nuORF'] 73133 18403 MRQLVLFNII True NCI_RA007_Epitope_Rep3 1245.7267493012098 1245.72511490379 80.575 3 -0.8534022121055056 0.2642895487808324 1.0 ['ENST00000481603.1_1_11:5626782-5632007:+|nuORF'] 115511 16104 TRRPPATA True NCI_RA007_Epitope_Rep3 868.4878989348399 868.48680993586 71.046 2 -0.8534083267388679 0.2642895487808324 1.0 ['CLEC14A|p.P315Rfs*26|1|0.14|ENSG00000176435|chr14:38255079-38255079|G/-|frameshift_variant', 'CLEC14A|p.P441Rfs*24|1|0.17|ENSG00000176435|chr14:38254703-38254703|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 22813 5944 EVAAVAVLMC True PC9_epitope_Rep5 1004.5034745395999 1004.50236993586 27.858 2 -0.853411227072728 0.2642895487808324 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 114289 22116 TPPPSLKELL True PC9_epitope_Rep4 1093.63831113629 1093.63720993586 93.285 2 -0.853458425600844 0.2642895487808324 1.0 ['ENSG00000124104|ENST00000491381|SNX21'] 64545 16286 LPRRTAAA True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50808496793 69.401 1 -0.8534755647317946 0.2642895487808324 1.0 ['ENST00000593841.1_2_19:51870593-51871198:-|nuORF'] 80274 8595 PGEDELTER True H1975_Epitope_Rep1 1044.4723680099999 1044.4717749679298 37.989 1 -0.8534831508737327 0.2642895487808324 1.0 ['ENSG00000162341|ENST00000294309|TPCN2'] 97802 12572 SELEGVSLVTG True PC9_epitope_Rep6 1089.55536935797 1089.55426993586 59.801 2 -0.853501994505983 0.2642895487808324 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2'] 8997 10303 AVGPFSRHGLR True H1975_Epitope_Rep3 1195.65742387143 1195.6563299358602 44.684 2 -0.8535139491832879 0.2642895487808324 1.0 ['ENSG00000161179|ENST00000292778|YDJC'] 120863 11549 VEMEDFDANI True PC9_epitope_Rep5 1181.4910548492498 1181.48941490379 49.42 3 -0.8535334276852344 0.2642895487808324 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 5583 12086 ANGELKKVEDL True PC9_epitope_Rep1 1214.65066672514 1214.6495699358602 51.349 2 -0.8535348798295709 0.2642895487808324 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 125153 13296 VIGPSQSWVDL True PC9_epitope_Rep5 1199.61863832087 1199.61700490379 56.154 3 -0.8535377166475138 0.2642895487808324 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 82461 16410 PPQDLSVHLW True PC9_epitope_Rep4 1190.60840799034 1190.60730993586 71.082 2 -0.8535522011952987 0.2642895487808324 1.0 ['nc|ENSG00000141968|P15498-2|VAV1', 'ENSG00000141968|ENST00000602142|VAV1'] 66314 10700 LSFSVRLPY True H1975_Epitope_Rep3 1080.59678067748 1080.59568993586 46.233 2 -0.8535748200367008 0.2642895487808324 1.0 ['nc|ENSG00000198788|Q02817|MUC2'] 46019 5958 ISGHNQEISEV True PC9_epitope_Rep4 1211.57823006087 1211.57659490379 29.853 3 -0.8536439390064395 0.2642924748195341 1.0 ['LRRIQ1|p.L557S|1|0.23|ENSG00000133640|chr12:85056463-85056463|T/C|missense_variant'] 84824 8237 QEAGLGEPSL True H1975_Epitope_Rep3 999.48728979815 999.48618993586 36.667 2 -0.8536478789285246 0.2642924748195341 1.0 ['nc|ENSG00000171462|Q6UY11-2|DLK2', 'ENSG00000171462|ENST00000372488|DLK2'] 84730 4540 QDRLLIPRWR True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 21.76 3 -0.8536487503783563 0.2642924748195341 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 120602 14496 VEHNRFEKPRI True PC9_epitope_Rep5 1423.7684308723897 1423.76677490379 60.759 3 -0.8536887754421879 0.26431699392569574 1.0 ['ENST00000585547.5_1_19:38182482-38190687:-|nuORF'] 67294 12314 LSRWEQEQI True PC9_epitope_Rep1 1187.5934862021898 1187.5918349037902 52.221 3 -0.8537487957649922 0.26438015594982484 1.0 ['ENSG00000159086|ENST00000331923|PAXBP1', 'ENST00000464256.1_1_21:34132086-34144033:-|nuORF', 'nc|ENSG00000159086|Q9Y5B6-3|PAXBP1', 'nc|ENSG00000159086|Q9Y5B6-4|PAXBP1', 'nc|ENSG00000159086|Q9Y5B6-2|PAXBP1'] 129831 13763 VRRLVKILLLG True PC9_epitope_Rep3 1278.8863611770998 1278.8847149037902 58.022 3 -0.8537711576625786 0.26438015594982484 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 70876 22365 LYEEEFWL True PC9_epitope_Rep3 1127.51752729727 1127.51642993586 91.307 2 -0.8537861589729152 0.2643905470879889 1.0 ['ENST00000335281.8_1_14:52434561-52434765:+|nuORF'] 138210 12059 YGSADLPSSIH True PC9_epitope_Rep1 1145.5353026197301 1145.5342099358602 51.244 2 -0.8538042358151504 0.26440093793259317 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 112342 8392 TLAENCPRFWQ True NCI_RA007_Epitope_Rep1 1363.6343054683498 1363.6332099358601 36.644 2 -0.8538150822258118 0.26440759364935873 1.0 ['ENST00000394586.6_1_14:66028378-66028441:+|nuORF'] 112739 12688 TLHELLERI True PC9_epitope_Rep1 1122.6397081186199 1122.63805490379 53.676 3 -0.8538267912950636 0.26440759364935873 1.0 ['ENSG00000122122|ENST00000356892|SASH3'] 35549 12596 GSVEEQLKSLK True NCI_RA007_Epitope_Rep2 1216.66631678928 1216.66520993586 53.608 2 -0.8538486554687228 0.2644283736828724 1.0 ['nc|ENSG00000130347|Q8WWV3-2|RTN4IP1', 'ENSG00000130347|ENST00000369063|RTN4IP1'] 18917 5926 ELEEDVKIYLD True NCI_RA007_Epitope_Rep1 1364.6711273861997 1364.6694749037902 27.098 3 -0.8538517182327114 0.2644283736828724 1.0 ['nc|ENSG00000135916|Q9NQX7-2|ITM2C', 'nc|ENSG00000135916|Q9NQX7-3|ITM2C', 'ENSG00000135916|ENST00000326427|ITM2C'] 3438 20117 AGKEDIIEWLS True PC9_epitope_Rep1 1259.63976768827 1259.6386699358602 82.21 2 -0.8538705298022989 0.26443502824858756 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.T606Nfs*97|1|0.33|ENSG00000205978|chr14:24409604-24409605|-/A|frameshift_variant'] 46390 7283 ISSAIQLLEDP True H1975_Epitope_Rep3 1184.6288686514 1184.6277699358602 32.988 2 -0.8538827411440518 0.26443502824858756 1.0 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 64622 14662 LPTDAGVYVC True H1975_Epitope_Rep1 1036.4899326504399 1036.4888299358602 61.612 2 -0.8539906251045178 0.2644454174376068 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1'] 101037 16487 SLGDLFLETF True PC9_epitope_Rep4 1140.57029114612 1140.56918993586 71.387 2 -0.8539935804905291 0.26446993022795967 1.0 ['ENSG00000168936|ENST00000382936|TMEM129', 'ENST00000460722.1_1_4:1718909-1719921:-|nuORF', 'ENST00000476253.1_1_4:1718909-1719614:-|nuORF'] 122107 5495 VGAEAAGQTV True NCI_RA007_Epitope_Rep5 901.4505103666099 901.44940993586 27.825 2 -0.8540098798207775 0.26449070673973224 1.0 ['chr20:45775602-45780699|401|21.99|0.16|7.06|-|2|WFDC3,None|1'] 100640 19362 SLDFFHSDRKV True PC9_epitope_Rep2 1349.6727991520502 1349.67170993586 79.853 2 -0.8540871326053733 0.26449070673973224 1.0 ['ENST00000590311.5_1_17:67108322-67108499:-|nuORF'] 16880 11022 EFHYIEEDLY True NCI_RA007_Epitope_Rep5 1356.5873977622398 1356.58630993586 49.031 2 -0.8541092794858359 0.2645152178518466 1.0 ['nc|ENSG00000066455|Q8TBA6-2|GOLGA5', 'ENSG00000066455|ENST00000163416|GOLGA5'] 43295 17518 IFTKENLTAP True PC9_epitope_Rep2 1132.61282466444 1132.61172993586 72.644 2 -0.8542520119692314 0.2645397282716154 1.0 ['ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF', 'ENST00000489736.5_1_3:148904295-148925363:-|nuORF'] 22806 5892 EVAAVAVLMC True PC9_epitope_Rep3 1004.5034745395999 1004.50236993586 27.727 2 -0.8542769255398424 0.2645887470342334 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 91838 5075 RKKKKKKK True PC9_epitope_Rep3 1070.7764168052997 1070.7753099358602 24.606 2 -0.8542852078594569 0.2645887470342334 1.0 ['AluSc_dup13832|chr7:33006087-33006413:-|2.242044650319211|0.4159080058002372|2.43|536.0|10|3|sense', 'ENST00000439685.6_1_3:112358751-112359896:-|nuORF', 'ENST00000475181.1_1_3:112359734-112359896:-|nuORF', 'ENST00000567998.5_1_16:28621482-28621938:-|nuORF', 'ENST00000308713.9_3_16:29910378-29910510:-|nuORF'] 22780 3444 ETWSVAFSP True H1975_Epitope_Rep2 1022.4709114580198 1022.4698099358601 18.039 2 -0.8543713609686878 0.2646273778756938 1.0 ['nc|ENSG00000176871|Q9NYS7-2|WSB2', 'ENSG00000176871|ENST00000315436|WSB2'] 55627 7111 LAKAERHSRSF True NCI_RA007_Epitope_Rep1 1300.7000169594 1300.69890993586 31.651 2 -0.8544248635505215 0.26463776302782094 1.0 ['ENST00000485956.1_1_2:238428630-238446180:+|nuORF'] 124098 11010 VGSPAEEI True PC9_epitope_Rep6 800.39159850816 800.39050993586 53.244 2 -0.85447165209249 0.26464814788662777 1.0 ['nc|ENSG00000168781|Q6PFW1-7|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-4|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-3|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-2|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1|PPIP5K1', 'ENSG00000168781|ENST00000420765|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-5|PPIP5K1'] 119741 5966 VAYAMRQYFL True PC9_epitope_Rep5 1260.6325145631997 1260.6308549037901 27.944 3 -0.8545109342481679 0.26467265435236964 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 70816 5268 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep1 1442.6356288295895 1442.6345299358602 25.327 2 -0.8545152672184458 0.2646830384251479 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 135638 191 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 1.0644 3 -0.854592480125845 0.2647499082102409 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 19687 16484 ELRKLPVP True PC9_epitope_Rep1 950.5913013742198 950.59020993586 68.231 2 -0.8545993122292016 0.26476029089882086 1.0 ['ENSG00000117408|ENST00000372343|IPO13'] 79415 20496 PATLVEPIA True PC9_epitope_Rep5 909.5171333744499 909.51602993586 83.877 2 -0.8546192764011658 0.26476693449313016 1.0 ['ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF'] 19688 16661 ELRKLPVP True PC9_epitope_Rep3 950.5913013742198 950.59020993586 69.223 2 -0.8546215974990565 0.26476693449313016 1.0 ['ENSG00000117408|ENST00000372343|IPO13'] 56727 14035 LDLFFRWLFD True H1975_Epitope_Rep3 1370.7023083751799 1370.70120993586 59.307 2 -0.8546980069011776 0.2647690048571106 1.0 ['nc|ENSG00000137216|Q5T3F8-3|TMEM63B', 'ENSG00000137216|ENST00000323267|TMEM63B'] 2405 12146 AEQEYHEL True H1975_Epitope_Rep2 1017.44033960573 1017.43924993586 51.805 2 -0.8547136494806039 0.2647690048571106 1.0 ['ENST00000276055.3_1_X:46457223-46457370:+|nuORF'] 66309 8138 LSFRWRENRCY True NCI_RA007_Epitope_Rep2 1528.7357508451198 1528.73464993586 36.288 2 -0.8547617556625448 0.2647690048571106 1.0 ['ENST00000563604.1_1_15:43017281-43017455:-|nuORF'] 109817 9005 TEEFITVYP True PC9_epitope_Rep1 1097.5280919809697 1097.52698993586 39.485 2 -0.8547929165227984 0.2647690048571106 1.0 ['ENSG00000154124|ENST00000284274|OTULIN', 'OTULIN|p.P323Hfs*8|1|0.18|ENSG00000154124|chr5:14692955-14692955|C/-|frameshift_variant'] 138807 16572 YIWFIIFFIQP True PC9_epitope_Rep5 1485.8060451677297 1485.80440490379 68.748 3 -0.8547974990967385 0.2647690048571106 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 128848 12441 VQDGIPVVTV True PC9_epitope_Rep2 1025.5757108797297 1025.57460993586 53.16 2 -0.8548020524630273 0.2647690048571106 1.0 ['ADAM21|p.C496Vfs*50|1|0.25|ENSG00000139985|chr14:70458981-70458981|C/-|frameshift_variant'] 3300 14330 AGFVWRLRG True PC9_epitope_Rep5 1060.5930327097199 1060.5919299358602 60.121 2 -0.8548126865779383 0.2647690048571106 1.0 ['chr22:23779368-23780359|457|19.7|0.78|4.67|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11', 'ENST00000492464.1_1_22:24123155-24123763:+|nuORF'] 3238 11193 AGETQGSLSVA True PC9_epitope_Rep4 1018.4931034545799 1018.49200993586 50.832 2 -0.8549703035189685 0.26477190901774744 1.0 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 107883 7475 SVVNAGSL True NCI_RA007_Epitope_Rep4 745.3970182417701 745.39646496793 35.399 1 -0.8550039619778134 0.26477190901774744 1.0 ['ENSG00000135917|ENST00000644224|SLC19A3'] 79690 16702 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.4554749679301 69.25 1 -0.8551134053197972 0.26477190901774744 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 63008 12694 LLPRASVGV True PC9_epitope_Rep6 910.5600012459399 910.55890993586 60.305 2 -0.8551828951525137 0.2647964082001468 1.0 ['ENST00000309295.8_1_11:65343742-65346557:+|nuORF'] 59478 12686 LFQNITLE True PC9_epitope_Rep3 976.52294703088 976.52184993586 53.82 2 -0.8552893263574105 0.2648773807338802 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'ENST00000472081.1_1_19:42131969-42133331:-|nuORF'] 16266 5908 EEEYPLMIMRK True NCI_RA007_Epitope_Rep3 1437.6996081468499 1437.69796490379 30.213 3 -0.8553496337645842 0.26488401970888453 1.0 ['ENST00000489282.1_1_1:59158492-59165724:-|nuORF'] 45239 20462 IPTPASLLQ True PC9_epitope_Rep1 938.54368247546 938.5431349679301 83.519 1 -0.8553603825016914 0.26488401970888453 1.0 ['ENST00000479835.1_1_7:75362785-75368238:-|nuORF'] 28335 4410 FRSATTSGAPG True NCI_RA007_Epitope_Rep5 1050.50942222506 1050.50832993586 23.593 2 -0.855403792426114 0.2648943980121979 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 11144 1317 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 7.1608 2 -0.8556344517643776 0.2649923767575809 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 56259 19659 LCTRAVRTRLF True PC9_epitope_Rep2 1334.76050904098 1334.75887490379 81.003 3 -0.8556460528341802 0.2649923767575809 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 41939 8656 IDDPDGLK True H1975_Epitope_Rep3 871.4287122928699 871.42760993586 38.291 2 -0.8556771417162321 0.2649923767575809 1.0 ['CON__Q2UVX4'] 69375 16528 LTVVGKISF True PC9_epitope_Rep1 962.5800679841799 962.57896993586 68.398 2 -0.8556790797343158 0.2649923767575809 1.0 ['ENSG00000134398|ENST00000256797|ERN2', 'ENST00000562562.1_1_16:23706236-23712034:-|nuORF'] 80676 7704 PGTTRILT True PC9_epitope_Rep1 857.49706663621 857.49596993586 34.454 2 -0.8557840128464472 0.2650272452638414 1.0 ['MUC5B|p.W4846R|1|0.31|ENSG00000117983|chr11:1251416-1251416|T/C|missense_variant'] 96483 9830 SAARVYFLF True NCI_RA007_Epitope_Rep3 1072.5705659296398 1072.56946993586 45.74 2 -0.8558351857091496 0.2650272452638414 1.0 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 27690 20056 FPKKELELQIG True PC9_epitope_Rep2 1300.7390878067197 1300.73798993586 82.552 2 -0.8558409147869703 0.26503013791448454 1.0 ['ENSG00000123561|ENST00000372563|SERPINA7'] 79681 16690 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.45488993586 69.025 2 -0.8559356775366173 0.26503013791448454 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 30282 9719 GAAAQQVVD True PC9_epitope_Rep2 857.4242956187699 857.42318993586 42.725 2 -0.8559480457558344 0.26503013791448454 1.0 ['ENSG00000148671|ENST00000372013|ADIRF'] 87060 8046 QNGLASSLPA True NCI_RA007_Epitope_Rep3 956.4927095317599 956.49160993586 38.736 2 -0.8560514534215417 0.26505088717304465 1.0 ['nc|ENSG00000118495|Q9UM63-2|PLAGL1', 'ENSG00000118495|ENST00000674357|PLAGL1'] 129970 14875 VRVRGSGV True NCI_RA007_Epitope_Rep1 828.4929843152798 828.49188993586 61.919 2 -0.8560834480063872 0.26505088717304465 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 56258 20078 LCTRAVRTRLF True PC9_epitope_Rep1 1334.76050904098 1334.75887490379 82.058 3 -0.8561168241356811 0.2650537786184118 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 17741 7130 EHRGPVQVT True PC9_epitope_Rep5 1021.53049202281 1021.52938993586 32.395 2 -0.8561204968728432 0.2650537786184118 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 83271 8058 PTAHCALT True PC9_epitope_Rep5 812.38507365908 812.38396993586 35.933 2 -0.856123261037499 0.2650537786184118 1.0 ['ENST00000568641.1_1_17:5403919-5404423:-|nuORF'] 46149 4191 ISLFPPLMY True H1975_Epitope_Rep3 1079.5725400755898 1079.57144993586 21.239 2 -0.8562417279110064 0.26507452574525747 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|353|2|anti-sense'] 34523 7008 GPQLQKGKI True NCI_RA007_Epitope_Rep4 967.5814649665099 967.58036993586 33.583 2 -0.8562803244258395 0.26507452574525747 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 30972 7469 GASATQAQAW True PC9_epitope_Rep2 989.4566583762097 989.45556993586 34.102 2 -0.8563206305239435 0.26508489886942654 1.0 ['ENST00000491370.1_1_2:220435199-220436548:-|nuORF'] 13563 9987 DPDLVSEGR True H1975_Epitope_Rep3 986.46688870674 986.46578993586 43.451 2 -0.8564243540009385 0.2651338724929782 1.0 ['ENSG00000203805|ENST00000398250|PLPP4'] 33542 10747 GLEGAKEALKE True H1975_Epitope_Rep1 1143.6135529404298 1143.61244993586 46.303 2 -0.8564301100585975 0.2651338724929782 1.0 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B', 'ENST00000589604.5_1_18:61064221-61077532:-|nuORF', 'ENST00000588059.5_1_18:61064418-61077532:-|nuORF', 'ENSG00000132612|ENST00000254950|VPS4A'] 43320 15933 IFVTNVRSL True PC9_epitope_Rep1 1047.60767971435 1047.60658993586 66.096 2 -0.8564740568621715 0.2651583582679388 1.0 ['ENSG00000082497|ENST00000367012|SERTAD4'] 122112 5052 VGAEEGLCAE True H1975_Epitope_Rep1 976.4171616329999 976.41606993586 24.504 2 -0.8565639419937948 0.26518572880207747 1.0 ['ENST00000470889.5_1_3:138327468-138327522:+|nuORF'] 7636 5134 ASHCPCLPK True NCI_RA007_Epitope_Rep4 954.44154298938 954.44044993586 26.266 2 -0.8565755789994332 0.26518572880207747 1.0 ['ENST00000527426.1_1_11:47405038-47417061:-|nuORF'] 44605 15705 ILQRVPPHAGT True H1975_Epitope_Rep1 1187.6774906096698 1187.67638993586 65.701 2 -0.8567114948473787 0.26518572880207747 1.0 ['ENST00000451194.5_1_3:50387445-50388060:-|nuORF'] 33106 6791 GIQGQVLRP True NCI_RA007_Epitope_Rep5 966.5610638750999 966.55996993586 32.807 2 -0.8567422868449412 0.26518572880207747 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 16824 14947 EEYEYMNRRRR True PC9_epitope_Rep1 1600.75285746124 1600.75120490379 62.315 3 -0.8568269494662878 0.2651923565440741 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 5297 16884 ALQHRPRLPR True PC9_epitope_Rep6 1242.7421565548998 1242.74050490379 77.461 3 -0.8568295635041245 0.2651923565440741 1.0 ['ENST00000323927.2_1_9:140077681-140079444:-|nuORF'] 86419 4323 QKKHHHHHHQQ True PC9_epitope_Rep1 1480.7296943782403 1480.72804490379 21.514 3 -0.8568956716697989 0.26521598013067466 1.0 ['ENSG00000141867|ENST00000679869|BRD4'] 70992 8052 LYHRRGWWHPA True PC9_epitope_Rep2 1477.7479702113299 1477.7463149037899 36.332 3 -0.8569055191768397 0.26521598013067466 1.0 ['ENST00000572418.1_1_17:3807220-3819678:-|nuORF'] 64955 10366 LQEQMRQQL True PC9_epitope_Rep5 1172.59719168364 1172.5960899358602 44.856 2 -0.8569363684757534 0.26521598013067466 1.0 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'UBQLN1|p.T475Nfs*27|1|0.55|ENSG00000135018|chr9:83665054-83665055|-/T|frameshift_variant'] 65992 10026 LSDYYYHA True PC9_epitope_Rep4 1030.4396113297398 1030.43850993586 46.227 2 -0.8569563115292653 0.26521598013067466 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 43059 13181 IEVFFKEIFLY True H1975_Epitope_Rep2 1446.7798899895397 1446.77878993586 55.825 2 -0.8569733187580744 0.26521598013067466 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 131228 3568 VTETISET True PC9_epitope_Rep5 878.42329255926 878.42218993586 18.8 2 -0.8570082839049707 0.2652217471673087 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 42412 4486 IEDKSHFYFLE True NCI_RA007_Epitope_Rep2 1426.67688147298 1426.67524490379 22.081 3 -0.85703837346354 0.2652217471673087 1.0 ['SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.D586Tfs*55|1|0.06|ENSG00000136531|chr2:165323239-165323239|G/-|frameshift_variant'] 135947 6986 WPWRWREWRPW True H1975_Epitope_Rep1 1739.8585832894696 1739.85694490379 31.909 3 -0.8570732097021349 0.2652217471673087 1.0 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF'] 64544 15825 LPRRTAAA True NCI_RA007_Epitope_Rep3 854.5086343794198 854.50808496793 69.879 1 -0.8570881545668791 0.2652217471673087 1.0 ['ENST00000593841.1_2_19:51870593-51871198:-|nuORF'] 93674 24393 RQRVRKKRS True NCI_RA007_Epitope_Rep5 1212.7639546286398 1212.76231490379 101.3 3 -0.8571140363002052 0.2652217471673087 1.0 ['ENST00000553968.1_1_14:80678377-80678506:-|nuORF'] 66537 11513 LSHTNSVVNP True PC9_epitope_Rep5 1066.54072235334 1066.5396299358601 49.281 2 -0.857132406549348 0.2652217471673087 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 5570 9890 ANASKWSP True H1975_Epitope_Rep2 859.41881631551 859.41770993586 43.03 2 -0.8572206608097244 0.26524622548327925 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'ENST00000560078.1_1_15:41101513-41102320:+|nuORF', 'ENST00000439365.6_2_19:47543749-47548643:+|nuORF', 'nc|ENSG00000166140|Q96K21-3|ZFYVE19'] 124921 25238 VHRPRVPHICR True NCI_RA007_Epitope_Rep5 1368.7673257569197 1368.76622993586 104.6 2 -0.8572463622713982 0.26525198938992045 1.0 ['ENST00000496259.5_1_7:149431420-149431519:+|nuORF'] 98638 6499 SFYIYHLYWWE True H1975_Epitope_Rep1 1605.7292513990099 1605.72760490379 30.059 3 -0.8572954956550812 0.26525198938992045 1.0 ['ENSG00000132017|ENST00000254337|DCAF15'] 57370 10737 LEALAPGGLQ True PC9_epitope_Rep1 967.5338460677499 967.53274993586 46.187 2 -0.8572984579567675 0.26525198938992045 1.0 ['ENSG00000114853|ENST00000232974|ZBTB47', 'nc|ENSG00000114853|Q9UFB7-2|ZBTB47'] 16933 15658 EFRERMLEI True PC9_epitope_Rep3 1221.6175927750498 1221.61594490379 65.373 3 -0.8573051012786683 0.26525198938992045 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'RIMS2|p.S809Kfs*25|1|0.17|ENSG00000176406|chr8:103975486-103975487|-/A|frameshift_variant'] 121423 16807 VEVVLSAL True PC9_epitope_Rep1 828.4956696538799 828.49456993586 69.472 2 -0.8573133049906682 0.26525198938992045 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'nc|ENSG00000115825|O94806-2|PRKD3', 'ENST00000494667.5_1_2:37496701-37543667:-|nuORF'] 19733 13262 ELRRRWHRWRL True H1975_Epitope_Rep1 1662.9443786020997 1662.94328993586 56.111 2 -0.8573418706841993 0.26525198938992045 1.0 ['ENSG00000215644|ENST00000400723|GCGR'] 102486 6094 SLVGQGQSSGP True PC9_epitope_Rep3 1015.4934378077498 1015.49234993586 28.489 2 -0.8573676442061834 0.26527272214227265 1.0 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930'] 37245 13018 GVRIQPMSER True PC9_epitope_Rep6 1171.6131761009499 1171.61152490379 61.654 3 -0.8573724746817658 0.26527272214227265 1.0 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 78017 12242 NVQYALNP True PC9_epitope_Rep1 917.4606811274899 917.45958993586 51.948 2 -0.857377853291445 0.2652830880796851 1.0 ['ENSG00000084774|ENST00000264705|CAD', 'ENST00000491891.1_1_2:27449097-27449208:+|nuORF'] 48465 20637 KAASLLSP True PC9_epitope_Rep1 785.46470387877 785.46360993586 84.201 2 -0.8573887564985917 0.26528971092394293 1.0 ['ENST00000378103.7_3_9:35748784-35748955:-|nuORF'] 7769 11919 ASRRPRARPPS True H1975_Epitope_Rep1 1249.7115847026098 1249.71048993586 50.848 2 -0.8574567345704696 0.26528971092394293 1.0 ['ENSG00000142347|ENST00000644032|MYO1F'] 66386 6340 LSGHSQQTSL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 31.462 2 -0.8575181394460057 0.2653000761829519 1.0 ['ENST00000479384.1_1_4:56308597-56309892:-|nuORF', 'ENST00000511124.1_1_4:56304552-56315592:-|nuORF', 'ENSG00000134852|ENST00000513440|CLOCK'] 38002 6401 HALNEVDPG True PC9_epitope_Rep1 950.4457593393399 950.44466993586 29.429 2 -0.8575605629649838 0.26531044114949986 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 61430 13057 LIVSTKEEL True PC9_epitope_Rep6 1030.5910265906998 1030.58992993586 61.827 2 -0.8576138973144436 0.2653161985639521 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant', 'WDFY3|p.N1161Kfs*4|1|0.29|ENSG00000163625|chr4:84794523-84794524|-/T|frameshift_variant'] 103731 15096 SPVGNPQLI True PC9_epitope_Rep3 923.5076313199099 923.50652993586 63.202 2 -0.8576392299016751 0.2653161985639521 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 124551 16384 VGVPTRAR True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50808496793 71.024 1 -0.8576482550645818 0.2653161985639521 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 74213 4161 NEGTLESINEK True H1975_Epitope_Rep3 1232.5884603913998 1232.5873699358601 21.124 2 -0.85765071336397 0.2653161985639521 1.0 ['ENSG00000151657|ENST00000379562|KIN', 'nc|ENSG00000151657|O60870-2|KIN'] 9233 5439 AVPAPEEESF True H1975_Epitope_Rep1 1074.48695544498 1074.4858499358602 25.98 2 -0.8576655988813375 0.2653161985639521 1.0 ['ENSG00000240694|ENST00000522362|PNMA2'] 99523 12769 SIDQLIHFHNK True H1975_Epitope_Rep2 1350.7044336335 1350.7033299358602 54.219 2 -0.8577018266202605 0.2653161985639521 1.0 ['SHROOM3|p.S250I|1|0.29|ENSG00000138771|chr4:76738922-76738922|G/T|missense_variant'] 136384 7681 WTQMWNRPCR True H1975_Epitope_Rep3 1376.623029592 1376.6219299358602 34.528 2 -0.8577364000846528 0.2653190769057157 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 10808 4733 CSGDDDDDNDD True NCI_RA007_Epitope_Rep3 1184.3047702012 1184.3036699358602 25.568 2 -0.8577461549852328 0.2653190769057157 1.0 ['ENST00000322002.4_1_2:5834175-5834352:+|nuORF'] 130427 8137 VSLWWLACP True NCI_RA007_Epitope_Rep4 1073.5368232732098 1073.5357299358602 38.089 2 -0.8577522582115287 0.2653190769057157 1.0 ['ENST00000338560.11_1_17:16318878-16320981:+|nuORF'] 127205 6543 VLVQQQSKEL True NCI_RA007_Epitope_Rep4 1170.6608374860198 1170.65920490379 31.781 3 -0.8578158654773895 0.26533980308629784 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 10409 7805 CGWDIAGDP True NCI_RA007_Epitope_Rep1 932.3698175177599 932.36872993586 34.351 2 -0.857822367534898 0.26533980308629784 1.0 ['TICAM1|p.E438Sfs*2|1|0.08|ENSG00000127666|chr19:4817066-4817066|C/-|frameshift_variant', 'ENSG00000127666|ENST00000248244|TICAM1'] 58627 8502 LEQYRLYQAQA True H1975_Epitope_Rep3 1381.6990138998901 1381.69790993586 37.689 2 -0.8579016488565425 0.26536427110515554 1.0 ['ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 14719 9480 DVLRGPNTI True PC9_epitope_Rep2 983.53999407735 983.53888993586 41.806 2 -0.8579523032341831 0.26541320507214694 1.0 ['ENSG00000205108|ENST00000378788|FAM205A'] 130684 8396 VSTRKESL True PC9_epitope_Rep4 918.5134449763399 918.51234993586 39.757 2 -0.8579551358561546 0.26541320507214694 1.0 ['ENSG00000186439|ENST00000334268|TRDN'] 65537 24174 LRRGWPPHR True NCI_RA007_Epitope_Rep2 1173.6631779582099 1173.66154490379 101.53 3 -0.8581604979590951 0.26550819487150557 1.0 ['ENSG00000091157|ENST00000254442|WDR7', 'nc|ENSG00000091157|Q9Y4E6-2|WDR7', 'ENST00000585754.1_1_18:54361909-54363699:+|nuORF'] 90768 4494 RERTLHIEA True NCI_RA007_Epitope_Rep4 1123.60980497267 1123.60816490379 23.672 3 -0.8582286389302493 0.2655326591348256 1.0 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 28102 10034 FQWWRMDWTPR True NCI_RA007_Epitope_Rep1 1607.7455872528296 1607.74393490379 43.039 3 -0.8582873194463165 0.26554301833568406 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 48838 22446 KDWIYRQLCET True PC9_epitope_Rep3 1453.7023850281698 1453.7012899358601 91.615 2 -0.8583764062470411 0.26554588663385187 1.0 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 95605 16490 RWWRRRWNPRL True NCI_RA007_Epitope_Rep2 1680.9338139183997 1680.9327099358602 68.87 2 -0.8583795095700057 0.26554588663385187 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 128978 10830 VQKQLEVIN True PC9_epitope_Rep3 1069.6131590176099 1069.61206993586 46.63 2 -0.8583840869542625 0.26554588663385187 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B', 'ENST00000251181.8_1_14:105360511-105361292:+|nuORF'] 56676 12854 LDKHSELF True PC9_epitope_Rep1 987.5025459394699 987.50144993586 54.317 2 -0.8584926777414394 0.26556285786816347 1.0 ['nc|ENSG00000042317|Q9P0W8-3|SPATA7', 'ENST00000556666.5_1_14:88883017-88904763:+|nuORF', 'nc|ENSG00000042317|Q9P0W8-2|SPATA7', 'SPATA7|p.H578Ifs*18|1|0.05|ENSG00000042317|chr14:88438352-88438353|-/CATATCCAAAGCCT|frameshift_variant', 'ENSG00000042317|ENST00000393545|SPATA7', 'ENST00000553626.5_1_14:88852162-88894100:+|nuORF'] 16045 8447 EDVYYSNL True NCI_RA007_Epitope_Rep2 1001.43419159613 1001.43308993586 37.499 2 -0.8584996619858122 0.26556285786816347 1.0 ['ENSG00000243627|ENST00000450895|SMIM34'] 38003 6332 HALNEVDPG True PC9_epitope_Rep3 950.4457593393399 950.44466993586 29.385 2 -0.8585717606885445 0.26556285786816347 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 119782 22609 VCKKFKKI True PC9_epitope_Rep2 992.6204933275199 992.61938993586 92.464 2 -0.858595092883994 0.26557608235791846 1.0 ['ENST00000366962.7_1_1:213178706-213181562:-|nuORF'] 129972 23371 VRVRGSGV True NCI_RA007_Epitope_Rep2 828.4929843152798 828.49188993586 97.783 2 -0.858623460963051 0.26557608235791846 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 127720 13307 VPAPSLSAP True PC9_epitope_Rep1 837.45961849833 837.4590749679301 56.048 1 -0.8586578922128265 0.26557608235791846 1.0 ['ENST00000294256.12_2_11:64895574-64895820:-|nuORF'] 22811 5238 EVAAVAVLMC True PC9_epitope_Rep4 1004.5034745395999 1004.50236993586 26.848 2 -0.8586654283542049 0.26557608235791846 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 129535 25505 VRKVGVKR True NCI_RA007_Epitope_Rep3 940.6294182184398 940.6288649679301 110.27 1 -0.8586891499325616 0.2655864393394537 1.0 ['ENSG00000149231|ENST00000646818|CCDC82', 'nc|ENSG00000149231|Q8N4S0-2|CCDC82', 'ENST00000530106.1_1_11:96116391-96117917:-|nuORF'] 123181 16494 VGLAVFLIYKF True NCI_RA007_Epitope_Rep2 1268.7532813188798 1268.75218993586 68.885 2 -0.8588023914078468 0.2656071524262124 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 5853 13845 APFLCPIP True PC9_epitope_Rep3 856.4516966669199 856.45058993586 58.336 2 -0.8588259436465046 0.2656071524262124 1.0 ['ENST00000465550.5_1_2:220096599-220096731:+|nuORF'] 46406 15420 ISSKILPLD True PC9_epitope_Rep4 984.5855472874399 984.58444993586 67.244 2 -0.8588978537395733 0.26564571170713824 1.0 ['ENSG00000171798|ENST00000304613|KNDC1'] 92480 24430 RLVREELE True PC9_epitope_Rep3 1042.5771078620598 1042.5760099358602 99.296 2 -0.8589395274696454 0.2656701685115984 1.0 ['nc|ENSG00000118762|Q13563-5|PKD2', 'nc|ENSG00000118762|Q13563-3|PKD2', 'ENSG00000118762|ENST00000237596|PKD2', 'ENST00000512858.1_1_4:88986866-88996843:+|nuORF'] 13016 12859 DLNEALTQPV True PC9_epitope_Rep1 1098.55570371114 1098.55460993586 54.336 2 -0.8589600594553097 0.26567677707742854 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 73085 12304 MREREREQRWR True H1975_Epitope_Rep3 1630.8222744337397 1630.82116993586 52.508 2 -0.8589636802481974 0.26567677707742854 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 86164 8655 QIEDPREQWRR True NCI_RA007_Epitope_Rep1 1511.7593227406699 1511.75822993586 37.668 2 -0.8589879192166646 0.2656833852705199 1.0 ['ENSG00000047644|ENST00000380861|WWC3', 'WWC3|p.T343Pfs*3|1|0.33|ENSG00000047644|chrX:10116470-10116470|A/-|frameshift_variant', 'nc|ENSG00000047644|Q9ULE0-2|WWC3', 'WWC3|p.P695Qfs*17|1|0.05|ENSG00000047644|chrX:10126284-10126296|CGCAGCTGCAGGA/-|frameshift_variant'] 59679 8686 LGAMMLPAIAP True NCI_RA007_Epitope_Rep5 1083.5820592134698 1083.5809699358601 40.075 2 -0.8589883692007398 0.2656833852705199 1.0 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ADAM8|p.Q214Rfs*17|1|0.52|ENSG00000151651|chr10:133272862-133272862|T/-|frameshift_variant', 'ENST00000559180.1_1_10:135086915-135090354:-|nuORF'] 139573 24210 YLVPAAAALA True NCI_RA007_Epitope_Rep2 958.5487678558999 958.54766993586 101.67 2 -0.8590099530546632 0.26568999309090396 1.0 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000272391|A8CG34|POM121C'] 26103 13812 FGQLRAAEMEV True NCI_RA007_Epitope_Rep1 1249.61250739461 1249.6114099358601 57.743 2 -0.8590207928378752 0.26568999309090396 1.0 ['ENST00000533685.1_1_11:64900606-64900720:-|nuORF'] 105857 19548 SSLVITTKL True NCI_RA007_Epitope_Rep2 960.58554728744 960.58444993586 80.978 2 -0.8591571349114208 0.2657276598144545 1.0 ['nc|ENSG00000169282|Q14722-2|KCNAB1', 'nc|ENSG00000169282|Q14722-3|KCNAB1', 'ENSG00000169282|ENST00000490337|KCNAB1'] 53724 4794 KSLEFWREYQF True PC9_epitope_Rep3 1531.74596409231 1531.7443049037902 23.537 3 -0.8592465059265322 0.2657276598144545 1.0 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.I804Yfs*16|1|0.14|ENSG00000197056|chr1:35114240-35114240|A/-|frameshift_variant'] 122020 18697 VFVMTILII True NCI_RA007_Epitope_Rep2 1047.6402257125899 1047.6391299358602 77.528 2 -0.8592633869619306 0.2657276598144545 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 33218 23191 GKCKKKKRRRK True PC9_epitope_Rep5 1414.9143243437795 1414.91322993586 94.185 2 -0.859269014804369 0.2657276598144545 1.0 ['ENST00000406027.2_1_2:216946734-216946833:+|nuORF'] 79689 15793 PDSFNIPGSS True PC9_epitope_Rep4 1019.45598966987 1019.45488993586 68.673 2 -0.8592859867839341 0.2657276598144545 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 112343 9484 TLAEQDPDEL True PC9_epitope_Rep5 1129.5138984688099 1129.51225490379 41.436 3 -0.8593343312753763 0.2657624633431085 1.0 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 90403 3396 REIEDPEDRKP True H1975_Epitope_Rep3 1382.6790067312995 1382.67736490379 17.894 3 -0.8593906725158509 0.2657624633431085 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 116178 18354 TSVHLWPL True PC9_epitope_Rep6 951.5178020807899 951.51670993586 83.241 2 -0.8594574353176957 0.26581511088553345 1.0 ['ENST00000296755.11_1_5:71502183-71502285:+|nuORF'] 112925 12018 TLLGQDHI True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 51.222 2 -0.8595065450115367 0.26582546172282534 1.0 ['nc|ENSG00000285231|A0A2R8YFM6|OOSP3'] 134481 9500 VYPSQALPPK True NCI_RA007_Epitope_Rep2 1098.6073453611798 1098.6062499358602 41.566 2 -0.8595729384076106 0.26583206451249086 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 46666 12115 ITDREKDPLI True H1975_Epitope_Rep3 1198.65575210558 1198.65464993586 51.765 2 -0.8595741127210188 0.26583206451249086 1.0 ['BBS10|p.M109I|1|0.07|ENSG00000179941|chr12:76347658-76347658|C/A|missense_variant'] 102420 9392 SLTNRQVI True PC9_epitope_Rep1 929.52942939365 929.52832993586 40.985 2 -0.8595994699226512 0.2658424146730013 1.0 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 87584 18515 QQLNNQREWG True PC9_epitope_Rep2 1271.60069684095 1271.5995899358602 76.562 2 -0.859675946261951 0.26588666478714407 1.0 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 101141 7486 SLGQYTSIV True PC9_epitope_Rep4 966.5022115863 966.50110993586 36.155 2 -0.8597175539881939 0.26588666478714407 1.0 ['SLC6A1|p.G111V|1|0.44|ENSG00000157103|chr3:11017936-11017936|G/T|missense_variant'] 130373 10812 VSKYSQAVP True PC9_epitope_Rep6 977.5181960036098 977.51708993586 52.436 2 -0.8597408714949181 0.26588666478714407 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 26711 9685 FIVLCLCPK True NCI_RA007_Epitope_Rep1 1034.56568087334 1034.56458993586 41.673 2 -0.8598054762165063 0.26588666478714407 1.0 ['ENST00000563356.5_1_16:75182509-75191064:+|nuORF'] 25854 16481 FFFREQKQKSK True NCI_RA007_Epitope_Rep2 1471.7935829910696 1471.7924899358602 68.836 2 -0.8598195126863444 0.26588666478714407 1.0 ['ENST00000370872.7_1_1:75171763-75171883:-|nuORF'] 58765 6549 LESFLQKYK True NCI_RA007_Epitope_Rep1 1154.6335601090198 1154.6324699358602 29.489 2 -0.8598814644220834 0.26588666478714407 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'ENST00000514858.5_1_4:2082849-2194957:-|nuORF', 'ENST00000503601.1_1_4:2083186-2091962:-|nuORF'] 87023 6704 QMRRKHYYRSY True H1975_Epitope_Rep1 1586.78884904714 1586.78719490379 30.833 3 -0.859893056235132 0.26588666478714407 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 60466 12465 LGWPGWGP True PC9_epitope_Rep1 868.4231734199599 868.42206993586 52.812 2 -0.8599085713750636 0.265907360942742 1.0 ['ENST00000415992.5_1_9:139693810-139699267:+|nuORF'] 930 4905 ADNIERLKAND True NCI_RA007_Epitope_Rep2 1257.6313282628898 1257.62968490379 23.701 3 -0.8599177388222823 0.265907360942742 1.0 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 42790 12414 IENLEESIDPV True NCI_RA007_Epitope_Rep1 1256.6136125100802 1256.61250993586 52.263 2 -0.859951713525357 0.26595999605316945 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9'] 63869 13097 LNMERNNRYQP True PC9_epitope_Rep2 1433.68338091909 1433.6822899358601 55.655 2 -0.8600046006287387 0.2659703428055931 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1'] 113907 24738 TNRKRPRPIPM True NCI_RA007_Epitope_Rep5 1364.7823071147197 1364.78120993586 102.64 2 -0.860084584115679 0.2659769402080456 1.0 ['ENST00000301071.11_1_12:49582839-49582968:-|nuORF'] 83250 8359 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 37.095 2 -0.8601082883590933 0.2659769402080456 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 53277 16262 KQKLLLKKRHI True H1975_Epitope_Rep2 1403.94527303555 1403.9436149037901 67.762 3 -0.8601768387808969 0.2660577614275445 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 3243 11107 AGEVERTSRAV True NCI_RA007_Epitope_Rep2 1173.61019889549 1173.60910993586 47.783 2 -0.8602502071180747 0.26607470049330517 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 137968 17286 YFLEMQEKLER True PC9_epitope_Rep4 1484.73335080328 1484.73169490379 74.494 3 -0.8602894168736324 0.26607470049330517 1.0 ['ENSG00000099308|ENST00000687212|MAST3', 'ENST00000608648.1_1_19:18220994-18239762:+|nuORF', 'nc|ENSG00000099308|O60307|MAST3'] 33227 7097 GKDVEPQGPP True H1975_Epitope_Rep2 1022.5032742154599 1022.50216993586 32.23 2 -0.8602951236692561 0.26607470049330517 1.0 ['ENSG00000176473|ENST00000402312|WDR25'] 64212 22503 LPGPPPPPTV True PC9_epitope_Rep1 970.5487678559 970.54766993586 91.359 2 -0.860307142234811 0.26609913884229963 1.0 ['ENST00000532085.1_1_11:118900045-118900432:-|nuORF'] 121500 7203 VEYRLVQS True PC9_epitope_Rep1 992.5290950404799 992.52798993586 32.521 2 -0.8603824308534467 0.26610948246701993 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 62689 14715 LLLLLLLLL True H1975_Epitope_Rep2 1035.7671404778698 1035.76604993586 61.762 2 -0.8603894347339158 0.2661123247128462 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'ENSG00000109758|ENST00000382774|HGFAC', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1'] 79684 16344 PDSFNIPGSS True PC9_epitope_Rep2 1019.45598966987 1019.4554749679301 68.112 1 -0.8603920140052327 0.2661123247128462 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 79957 8631 PETALWGP True NCI_RA007_Epitope_Rep1 869.42831837005 869.4272299358599 37.574 2 -0.8603951438616385 0.2661123247128462 1.0 ['ENSG00000102870|ENST00000262525|ZNF629'] 125155 9246 VIGRISSIREF True NCI_RA007_Epitope_Rep1 1275.72992010535 1275.7288299358602 39.964 2 -0.8604128165805526 0.2661151667183404 1.0 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 35988 9097 GTVPVSVAVT True PC9_epitope_Rep3 928.52294703088 928.52184993586 39.931 2 -0.8604181938281067 0.2661151667183404 1.0 ['ENST00000399215.5_1_21:37431931-37432327:-|nuORF'] 30129 9134 FYMILMSP True H1975_Epitope_Rep1 1000.4761971625999 1000.47508993586 40.04 2 -0.8604447266339015 0.2661151667183404 1.0 ['TRDMT1|p.D71Y|1|0.25|ENSG00000107614|chr10:17168881-17168881|C/A|missense_variant'] 70266 14769 LVRLPGLA True PC9_epitope_Rep4 837.5436229058099 837.54252993586 64.742 2 -0.860490454553225 0.2661217587373168 1.0 ['ENST00000269321.11_1_17:79826145-79826631:-|nuORF'] 110057 9807 TELEWHIC True H1975_Epitope_Rep3 1029.45896687533 1029.4578699358601 42.749 2 -0.8605177909862749 0.2661217587373168 1.0 ['ENSG00000179292|ENST00000327259|TMEM151A'] 130194 4906 VSELQSVK True NCI_RA007_Epitope_Rep2 888.4916469026 888.49054993586 23.705 2 -0.8605516561632666 0.26613210073138766 1.0 ['SOBP|p.E769Q|1|0.3|ENSG00000112320|chr6:107635149-107635149|G/C|missense_variant'] 94753 14363 RSIRKKRSP True NCI_RA007_Epitope_Rep5 1126.70470841702 1126.7036099358602 61.932 2 -0.8607037548841452 0.2662091512478334 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 99990 22654 SIPLLWLQ True PC9_epitope_Rep1 968.5695033004799 968.56840993586 91.944 2 -0.8607101191887034 0.2662091512478334 1.0 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000553314.1_1_12:56814492-56814858:-|nuORF'] 13873 6686 DQSNSLQQV True PC9_epitope_Rep5 1017.47270236317 1017.47160993586 30.69 2 -0.8607537875028568 0.26622983160713026 1.0 ['ENSG00000105866|ENST00000222584|SP4'] 63187 10329 LLRTCECDF True NCI_RA007_Epitope_Rep3 1098.4838017241798 1098.4827099358602 47.693 2 -0.8607722600903781 0.26622983160713026 1.0 ['IGF2R|p.S1781C|1|0.09|ENSG00000197081|chr6:160078225-160078225|A/T|missense_variant'] 116103 4382 TSRPAVSTGT True NCI_RA007_Epitope_Rep5 975.49852318819 975.4974299358599 23.479 2 -0.860793325213481 0.2662401713496604 1.0 ['ENST00000540568.1_1_12:132404621-132404756:+|nuORF'] 116510 12823 TTRRWKRWFKF True NCI_RA007_Epitope_Rep1 1610.8946344450194 1610.8935299358602 53.867 2 -0.8609555087428835 0.2662467591026942 1.0 ['nc|ENSG00000164542|Q8NCT3|MATCAP2'] 73629 7913 MWNWMVSL True PC9_epitope_Rep4 1065.47759414493 1065.4764899358602 37.868 2 -0.860971298567347 0.2662467591026942 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 57318 6656 LEAAQQEKR True NCI_RA007_Epitope_Rep2 1071.56727145435 1071.5661699358602 30.502 2 -0.8609969096253545 0.2662711888289253 1.0 ['TBC1D2|p.A616Pfs*41|1|0.12|ENSG00000095383|chr9:98208972-98208972|C/-|frameshift_variant', 'nc|ENSG00000095383|Q9BYX2-4|TBC1D2', 'TBC1D2|p.I743Hfs*4|1|0.29|ENSG00000095383|chr9:98203331-98203332|AT/-|frameshift_variant', 'nc|ENSG00000095383|Q9BYX2-3|TBC1D2', 'nc|ENSG00000095383|Q9BYX2-2|TBC1D2', 'ENSG00000095383|ENST00000465784|TBC1D2'] 33661 13222 GLGPRELLT True PC9_epitope_Rep1 954.5498304850599 954.54872993586 55.722 2 -0.8610357182894423 0.2662740235585865 1.0 ['ENST00000394071.6_2_14:74184720-74184954:-|nuORF'] 63360 10884 LLTSPGPT True PC9_epitope_Rep1 784.43306939732 784.43196993586 46.749 2 -0.8610507453855968 0.2662740235585865 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 123752 17118 VGRHQRGR True NCI_RA007_Epitope_Rep4 964.5427284723598 964.54217496793 74.162 1 -0.8610521261539175 0.2662740235585865 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 83906 17187 PVPTLWNEPAE True NCI_RA007_Epitope_Rep2 1251.6135529404298 1251.6129749679299 71.593 1 -0.8611576238887244 0.2663266312541389 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 39824 11459 HNIKLFVL True NCI_RA007_Epitope_Rep5 982.59638675466 982.59528993586 50.725 2 -0.8611882446094561 0.26632946348061315 1.0 ['SLCO2B1|p.I622Sfs*10|1|0.47|ENSG00000137491|chr11:75203340-75203340|C/-|frameshift_variant', 'nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1', 'SLCO2B1|p.S330Lfs*15|1|0.5|ENSG00000137491|chr11:75188148-75188148|C/-|frameshift_variant'] 113195 9495 TLQDNLIE True PC9_epitope_Rep4 944.4814761417199 944.48036993586 44.135 2 -0.8611992985691321 0.26632946348061315 1.0 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 31958 6810 GEPEAPEPP True H1975_Epitope_Rep3 921.4079768482899 921.4074249679301 31.148 1 -0.8612519893140675 0.26632946348061315 1.0 ['ENSG00000105732|ENST00000359044|ZNF574', 'nc|ENSG00000105732|Q6ZN55-2|ZNF574'] 75507 23339 NKNRRKLF True PC9_epitope_Rep3 1074.6410455312998 1074.6399499358602 95.052 2 -0.8612684892539324 0.2663360477894559 1.0 ['ENSG00000122870|ENST00000373886|BICC1'] 44410 20677 ILGEKVPDL True PC9_epitope_Rep3 982.5698972232998 982.56880993586 84.808 2 -0.8612850531735083 0.2663360477894559 1.0 ['ENSG00000258890|ENST00000556440|CEP95', 'ENST00000580188.1_2_17:62503129-62515542:+|nuORF'] 76283 9852 NPLQTCLSAT True PC9_epitope_Rep2 1046.5066453437398 1046.50554993586 43.23 2 -0.8613785892004978 0.26637456149001815 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 136546 6013 WWFRWRLDRYV True NCI_RA007_Epitope_Rep1 1681.8629999635698 1681.86081987172 27.435 4 -0.8614135284171008 0.26638489715412794 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 92391 10936 RLPTPEQI True PC9_epitope_Rep1 952.5341804209199 952.53308993586 46.953 2 -0.8614681033362424 0.26638772663877264 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 87959 3290 QRLRMVWRRKR True NCI_RA007_Epitope_Rep2 1583.9419360739496 1583.93973987172 17.461 4 -0.8614781621566547 0.26638772663877264 1.0 ['ENST00000285689.7_2_5:125759302-125805397:+|nuORF', 'ENST00000544396.5_2_5:125759302-125807964:+|nuORF', 'nc|ENSG00000155324|Q96HH9-2|GRAMD2B'] 57126 15091 LDTENLFEAQQ True H1975_Epitope_Rep1 1306.60411045554 1306.6030099358602 63.301 2 -0.8615023051564025 0.26638772663877264 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.W1342Lfs*5|1|0.44|ENSG00000131018|chr6:152441254-152441255|-/A|frameshift_variant'] 77178 13739 NRRRRRDWFWR True H1975_Epitope_Rep3 1702.9141411029796 1702.91304993586 58.144 2 -0.8615639261633949 0.26639055588425886 1.0 ['ENST00000361972.8_1_10:7212945-7217999:-|nuORF'] 28213 10812 FRERHHLSRHM True H1975_Epitope_Rep3 1504.7582176252001 1504.7571299358601 46.667 2 -0.861576271147218 0.26639055588425886 1.0 ['ENSG00000152784|ENST00000415738|PRDM8', 'nc|ENSG00000265763|Q96MN9-2|ZNF488', 'ENSG00000265763|ENST00000585316|ZNF488'] 25172 4990 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 25.807 2 -0.8616234232369068 0.26639055588425886 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 139829 13304 YPNFMNHEKFW True H1975_Epitope_Rep1 1511.6656055966296 1511.66450993586 56.279 2 -0.861674117633836 0.2663999661928977 1.0 ['FMO4|p.S512Yfs*4|1|0.05|ENSG00000076258|chr1:171341697-171341697|C/-|frameshift_variant', 'ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 123992 15290 VGSDYYIQL True PC9_epitope_Rep5 1056.51277627 1056.51166993586 63.822 2 -0.8617689777797242 0.2663999661928977 1.0 ['ENSG00000164715|ENST00000297293|LMTK2'] 24696 20450 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.5424049679301 85.496 1 -0.8618304478363262 0.2663999661928977 1.0 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 63575 23536 LMEDDEEP True H1975_Epitope_Rep1 976.36954273424 976.36844993586 97.776 2 -0.8618354388560884 0.2663999661928977 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2'] 56954 10856 LDQRCQVP True H1975_Epitope_Rep1 957.47020026537 957.46910993586 46.717 2 -0.8618601714410533 0.2663999661928977 1.0 ['ENST00000397412.7_1_16:1725816-1726149:+|nuORF'] 131383 9997 VTHEQAVAI True PC9_epitope_Rep1 966.5134449763399 966.51234993586 43.319 2 -0.8619845598334438 0.26646289070753454 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 46152 14600 ISLGLRNEI True PC9_epitope_Rep5 1013.58694426977 1013.58584993586 61.16 2 -0.8620172768369881 0.26646289070753454 1.0 ['ENST00000265689.8_1_11:67821205-67821301:-|nuORF'] 125688 23549 VKNHSGGG True NCI_RA007_Epitope_Rep5 754.3722004762599 754.37110993586 97.894 2 -0.862045411111675 0.2664732230892751 1.0 ['ENSG00000165359|ENST00000639893|INTS6L', 'nc|ENSG00000165359|Q5JSJ4|INTS6L'] 46062 13346 ISGQAFGVGAL True PC9_epitope_Rep5 1018.5447451046198 1018.54364993586 56.35 2 -0.8620962048542385 0.26648355517994227 1.0 ['ENSG00000076650|ENST00000170564|GPATCH1', 'ENST00000592165.1_1_19:33587130-33591098:+|nuORF'] 43237 21886 IFLLVLYL True PC9_epitope_Rep4 992.6310409278799 992.6299499358599 92.395 2 -0.8621275187260308 0.2664938869795481 1.0 ['ENSG00000146242|ENST00000369750|TPBG'] 30685 8466 GALDHSDQPDP True NCI_RA007_Epitope_Rep1 1150.4890807032998 1150.48798993586 36.93 2 -0.8621892982297279 0.2665070422535211 1.0 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2'] 42127 9725 IDNIKYSTF True NCI_RA007_Epitope_Rep4 1099.55497543515 1099.5538699358601 44.252 2 -0.862193481582595 0.2665070422535211 1.0 ['ENST00000424720.2_12:132824120-132905933:-|nuORF', 'nc|ENSG00000182870|Q9HCQ5|GALNT9', 'ENSG00000182870|ENST00000328957|GALNT9'] 25173 5835 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 29.309 2 -0.8622184459801938 0.2665070422535211 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46387 5619 ISRYQFSFLTL True PC9_epitope_Rep6 1373.73433677945 1373.73268490379 29.689 3 -0.8622267779123116 0.2665070422535211 1.0 ['ENSG00000182747|ENST00000331858|SLC35D3'] 73225 7197 MSDMNESRPPV True H1975_Epitope_Rep2 1261.54310750545 1261.54147490379 32.617 3 -0.8624874991530084 0.2665549390192378 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 12156 20792 DIEFMKRSHEK True H1975_Epitope_Rep1 1418.6976340008998 1418.69652993586 86.399 2 -0.8624943089794462 0.2665549390192378 1.0 ['ENST00000469999.1_1_7:152064752-152065184:+|nuORF'] 120108 10886 VEAAAAAV True H1975_Epitope_Rep3 700.3755545211999 700.3750049679301 46.956 1 -0.8625107557920267 0.2665549390192378 1.0 ['nc|ENSG00000183955|Q9NQR1|KMT5A'] 44853 7131 INFATLNP True H1975_Epitope_Rep3 888.4705175352 888.46942993586 32.401 2 -0.8625126995410125 0.2665549390192378 1.0 ['nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6', 'nc|ENSG00000186976|Q5THR3-3|EFCAB6'] 141971 14358 YVIHTLAASL True PC9_epitope_Rep2 1086.60734536118 1086.6062499358602 60.49 2 -0.8625233475996483 0.2665549390192378 1.0 ['DMXL1|p.M2231I|1|0.11|ENSG00000172869|chr5:119175272-119175272|G/A|missense_variant'] 126257 17928 VLHFKPCI True PC9_epitope_Rep5 955.5313439699498 955.53024993586 73.977 2 -0.862532659297855 0.2665549390192378 1.0 ['ENST00000330374.6_1_X:150577636-150577702:+|nuORF'] 122917 8399 VGHRQHQL True PC9_epitope_Rep3 973.52059604545 973.51948993586 37.272 2 -0.8626093892334518 0.2665652682129931 1.0 ['ENST00000261609.11_1_15:28465605-28465737:-|nuORF'] 115736 8605 TSASRLMHL True PC9_epitope_Rep5 1014.5280494946601 1014.52694993586 38.043 2 -0.8626285858856546 0.2665755971158179 1.0 ['ENST00000311085.8_2_5:118407331-118433701:+|nuORF'] 141169 6649 YSTGTGWI True PC9_epitope_Rep4 883.4075829254699 883.40648993586 32.744 2 -0.8627016138646567 0.26660000844963316 1.0 ['ENSG00000164411|ENST00000525899|GJB7'] 137832 5309 YERQSPTP True NCI_RA007_Epitope_Rep5 976.4614094034799 976.46030993586 27.115 2 -0.8627336743201642 0.2666169098180589 1.0 ['ENST00000480958.1_1_17:41902775-41908980:-|nuORF', 'MPP3|p.D154Tfs*33|1|0.2|ENSG00000161647|chr17:43827814-43827814|C/-|frameshift_variant', 'nc|ENSG00000161647|Q13368-2|MPP3', 'ENST00000589375.5_1_17:41895408-41909274:-|nuORF', 'ENSG00000161647|ENST00000398389|MPP3'] 142918 11135 YYWPRPRRYVE True H1975_Epitope_Rep1 1583.7997310006697 1583.79808490379 47.798 3 -0.8627490415441471 0.2666169098180589 1.0 ['ENSG00000274274|ENST00000612958|GAGE13'] 55474 8023 LAGDFSFGR True PC9_epitope_Rep2 968.4715801643599 968.47048993586 36.221 2 -0.8627506636882752 0.2666169098180589 1.0 ['ENSG00000186766|ENST00000388920|FOXI2'] 35998 5744 GTWGTGGK True PC9_epitope_Rep1 762.3660524666599 762.36494993586 26.912 2 -0.8627651492140401 0.266627237266416 1.0 ['ENST00000590478.1_1_17:33569582-33569933:-|nuORF'] 3086 14157 AGAAASSAADP True PC9_epitope_Rep5 887.3984747937499 887.39736993586 59.466 2 -0.8628153977463462 0.26665164615427944 1.0 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000469930.1_1_7:140534396-140624503:-|nuORF'] 75386 9437 NITKCLPQL True PC9_epitope_Rep4 1028.5688516774799 1028.56774993586 43.911 2 -0.8628390726183081 0.2666619728226431 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-3|RXFP1', 'RXFP1|p.V488*|1|0.28|ENSG00000171509|chr4:158646907-158646907|G/-|frameshift_variant', 'RXFP1|p.P517Lfs*5|1|0.33|ENSG00000171509|chr4:158646994-158646994|C/-|frameshift_variant'] 77970 12572 NVNDAGFQAM True H1975_Epitope_Rep3 1065.45494412405 1065.45384993586 53.56 2 -0.8628518560124496 0.26666760535616224 1.0 ['ESF1|p.R761G|1|0.18|ENSG00000089048|chr20:13715149-13715149|G/C|missense_variant'] 43330 10685 IFWNKYFPPFY True NCI_RA007_Epitope_Rep2 1520.7492585676 1520.74816993586 46.164 2 -0.8628829202799471 0.26666760535616224 1.0 ['ENST00000519374.5_1_5:172461698-172461947:+|nuORF'] 5141 13891 ALLPLPPAA True H1975_Epitope_Rep1 861.53238951577 861.53128993586 58.581 2 -0.8628959668156878 0.26666760535616224 1.0 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF'] 78992 26743 PAKVWGIC True PC9_epitope_Rep2 872.4578446765198 872.45674993586 109.74 2 -0.8629134773022118 0.26666760535616224 1.0 ['ENST00000354179.8_2_5:176721804-176722098:+|nuORF'] 5366 18944 ALSEVKLFI True PC9_epitope_Rep6 1018.6062827320198 1018.60518993586 85.514 2 -0.8629138792349652 0.26666760535616224 1.0 ['ENSG00000180432|ENST00000316161|CYP8B1'] 117804 12838 TVWPFAWHGLL True NCI_RA007_Epitope_Rep1 1325.6920780446499 1325.6909899358602 53.926 2 -0.862970749832836 0.26666760535616224 1.0 ['ENST00000609898.1_1_10:45454636-45454795:-|nuORF'] 81514 16348 PLGVRGRG True H1975_Epitope_Rep1 810.4824196315799 810.48187496793 68.242 1 -0.8630011763495415 0.2666741759711643 1.0 ['ENST00000257897.7_2_12:58119581-58120334:-|nuORF'] 3711 10144 AGRWWRCRR True H1975_Epitope_Rep3 1245.64139696781 1245.6402899358602 44.063 2 -0.8630088800429655 0.2666741759711643 1.0 ['GPR45|p.S166Rfs*94|1|0.64|ENSG00000135973|chr2:105242347-105242347|G/-|frameshift_variant'] 115928 17628 TSGLAKDAW True PC9_epitope_Rep5 947.47124581119 947.47014993586 72.817 2 -0.8631087430930943 0.26669294553235817 1.0 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|2|fusion', 'nc|ENSG00000010810|P06241-2|FYN'] 100309 9179 SKICWHDNR True NCI_RA007_Epitope_Rep2 1157.5400111606898 1157.5389099358601 40.313 2 -0.863137285987354 0.26669294553235817 1.0 ['ENSG00000035681|ENST00000038176|NSMAF', 'nc|ENSG00000035681|Q92636-2|NSMAF', 'ENST00000517612.5_1_8:59498999-59503485:-|nuORF'] 60336 4144 LGSLQPRTHR True NCI_RA007_Epitope_Rep1 1163.65233849099 1163.65069490379 20.2 3 -0.8631872635776292 0.26669294553235817 1.0 ['ENST00000591384.5_1_17:76624040-76626354:-|nuORF'] 21593 10981 ERQRIVQQYHP True PC9_epitope_Rep1 1452.7585944646798 1452.75694490379 47.128 3 -0.8632068946702658 0.26669294553235817 1.0 ['ENST00000510527.5_1_4:113153247-113186224:+|nuORF', 'ENSG00000138660|ENST00000274000|AP1AR', 'nc|ENSG00000138660|Q63HQ0-2|AP1AR'] 101477 8685 SLLC[Carbamidomethyl]RVHELE True H1975_Epitope_Rep3 1254.6390567750502 1254.6379499358602 38.405 2 -0.8632202230944264 0.26669294553235817 1.0 ['KIF19|p.P803Rfs*40|1|0.72|ENSG00000196169|chr17:74354260-74354261|CC/-|frameshift_variant', 'KIF19|p.G979Wfs*20|1|0.24|ENSG00000196169|chr17:74355247-74355248|-/G|frameshift_variant', 'ENSG00000196169|ENST00000389916|KIF19'] 58703 11863 LERRHRLQ True H1975_Epitope_Rep1 1106.6421081604599 1106.6410099358602 50.63 2 -0.863223524582285 0.26669294553235817 1.0 ['nc|ENSG00000124091|Q6ZNI0|GCNT7', 'ENSG00000124091|ENST00000243913|GCNT7'] 75452 7237 NKDFKQNTP True NCI_RA007_Epitope_Rep4 1090.54072235334 1090.5396299358601 34.471 2 -0.8632244492754025 0.26669294553235817 1.0 ['ENST00000476246.5_1_19:35991290-35996867:-|nuORF'] 107503 9000 SVNGYTFGSL True NCI_RA007_Epitope_Rep3 1043.49237517859 1043.4912699358601 42.5 2 -0.8632609740764174 0.26669294553235817 1.0 ['ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF'] 11986 24286 DHQERMIRG True PC9_epitope_Rep3 1140.5458248171199 1140.54418490379 98.729 3 -0.8632617453777711 0.26669294553235817 1.0 ['ENST00000421692.5_2_6:30003742-30025305:-|nuORF', 'ENST00000431012.5_1_6:30024744-30025305:-|nuORF'] 17740 7030 EHRGPVQVT True PC9_epitope_Rep5 1021.53049202281 1021.52938993586 32.01 2 -0.8633261768649259 0.26669294553235817 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 100340 19528 SKMDPMSLESL True PC9_epitope_Rep6 1236.5730106514 1236.57190993586 87.777 2 -0.8634077366104295 0.26671734662274404 1.0 ['ENSG00000088854|ENST00000252032|DNAAF9'] 10652 5481 CPPCPPEQR True H1975_Epitope_Rep3 1025.44227126537 1025.4411699358602 26.135 2 -0.8634207649298958 0.2667276694587175 1.0 ['ENST00000449552.6_1_17:18601353-18601506:+|nuORF'] 123107 20718 VGKKICLSIS True PC9_epitope_Rep6 1046.6158018698998 1046.6147099358602 92.452 2 -0.8634616458362541 0.2667379920040543 1.0 ['ENSG00000198833|ENST00000435041|UBE2J1'] 84639 6987 QDFYPTLGLPK True H1975_Epitope_Rep1 1277.6655885132898 1277.66448993586 31.912 2 -0.8634660105180805 0.26674831425876655 1.0 ['ENSG00000177984|ENST00000316144|LCN15'] 124916 19365 VHRERRRKA True NCI_RA007_Epitope_Rep5 1206.71700443622 1206.71590993586 81.371 2 -0.8635067936145424 0.26675769263252724 1.0 ['ENSG00000215045|ENST00000457091|GRID2IP'] 122817 3470 VGGRWTRWR True NCI_RA007_Epitope_Rep4 1172.63154347676 1172.62990490379 19.286 3 -0.8635175530961231 0.26675769263252724 1.0 ['ENST00000229329.6_1_12:22199202-22199379:+|nuORF'] 45803 11736 ISDARSDLL True PC9_epitope_Rep3 988.5189242796 988.51782993586 50.161 2 -0.8635185957492172 0.26675769263252724 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3', 'ENSG00000132970|ENST00000335327|WASF3'] 37295 23511 GVRWARRA True PC9_epitope_Rep1 970.5573159073398 970.55676496793 95.222 1 -0.863520221107967 0.26675769263252724 1.0 ['ENST00000415992.5_1_9:139702603-139703092:+|nuORF'] 134529 17695 VYQVRWLRP True PC9_epitope_Rep6 1215.68766137055 1215.68656993586 80.699 2 -0.8635217820983181 0.26675769263252724 1.0 ['ENST00000463900.5_1_2:74753929-74756164:-|nuORF', 'ENSG00000115307|ENST00000377526|AUP1', 'ENST00000466894.5_1_2:74754206-74756164:-|nuORF', 'nc|ENSG00000115307|Q9Y679-3|AUP1'] 59222 15968 LFEKKVYL True PC9_epitope_Rep1 1038.6113681124598 1038.61026993586 66.228 2 -0.8635477148164629 0.26676801373815856 1.0 ['PLG|p.E414Rfs*20|1|0.2|ENSG00000122194|chr6:160722545-160722546|-/C|frameshift_variant', 'ENSG00000122194|ENST00000308192|PLG'] 141135 4885 YSSKPQGKGQK True NCI_RA007_Epitope_Rep2 1206.6356853673399 1206.63458993586 23.624 2 -0.863578580146132 0.26677833455323463 1.0 ['ENST00000512285.5_1_4:174219050-174219110:+|nuORF'] 132932 6376 VVNFITFFIFL True NCI_RA007_Epitope_Rep5 1358.7638460025798 1358.76220490379 31.198 3 -0.86359381225866 0.2667802001379291 1.0 ['ENSG00000139133|ENST00000266483|ALG10'] 25073 6573 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 30.18 2 -0.8636101509896396 0.2667802001379291 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 126856 11693 VLQDFRSL True PC9_epitope_Rep2 976.5341804209199 976.53308993586 50.308 2 -0.8636477901460365 0.2667802001379291 1.0 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.P1265T|1|0.17|ENSG00000185010|chrX:154929997-154929997|G/T|missense_variant'] 109280 11125 TAVERLKE True PC9_epitope_Rep4 944.5290950404799 944.52798993586 50.569 2 -0.8636628729183882 0.2667802001379291 1.0 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 100176 6821 SITTGKAAP True PC9_epitope_Rep3 844.4654321547598 844.46432993586 31.254 2 -0.8636688665743104 0.2667802001379291 1.0 ['EPHA7|p.Q440K|1|0.32|ENSG00000135333|chr6:93356723-93356723|G/T|missense_variant'] 60961 13651 LIDPWKFQRMK True NCI_RA007_Epitope_Rep1 1460.7962258433597 1460.7951299358601 57.112 2 -0.8637021288112251 0.2667802001379291 1.0 ['ENSG00000125531|ENST00000370097|FNDC11'] 98121 11894 SESHWKSL True PC9_epitope_Rep3 972.46649478392 972.46538993586 50.77 2 -0.8637219887778438 0.2667802001379291 1.0 ['RGS14|p.R286W|1|0.21|ENSG00000169220|chr5:177368723-177368723|C/T|missense_variant'] 72518 23490 MLFTIHPVDG True NCI_RA007_Epitope_Rep5 1128.56376629704 1128.56212490379 97.66 3 -0.8637542310958688 0.26678957442017565 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 22541 7374 ETHKWAWFRRY True NCI_RA007_Epitope_Rep1 1578.7844152896998 1578.78277490379 32.678 3 -0.8637546358313848 0.26678957442017565 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'ENST00000570209.1_1_15:31127242-31129800:+|nuORF'] 70818 5468 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep3 1442.6356288295895 1442.6345299358602 26.086 2 -0.8637587451920891 0.26678957442017565 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 94581 9109 RRRYYRLLQSP True PC9_epitope_Rep2 1506.8531635558597 1506.85150490379 40.378 3 -0.8637692599023213 0.26678957442017565 1.0 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 79890 12929 PENLYNDRMFR True NCI_RA007_Epitope_Rep1 1453.67723290949 1453.6761299358602 54.281 2 -0.8637723935119028 0.26678957442017565 1.0 ['ENST00000518876.1_1_8:97243285-97244208:-|nuORF', 'ENST00000519322.1_1_8:97243965-97247767:-|nuORF', 'ENSG00000156467|ENST00000287022|UQCRB', 'nc|ENSG00000156467|P14927-2|UQCRB'] 69745 13483 LVFFFFFFLRQ True H1975_Epitope_Rep3 1509.8172785577697 1509.8161899358602 57.138 2 -0.8638460728116654 0.26681396625244524 1.0 ['ENST00000294008.3_1_16:3632019-3632346:-|nuORF'] 80781 6963 PHKRSHRHRGK True H1975_Epitope_Rep3 1394.78681533154 1394.78515490379 31.744 3 -0.8638887015395299 0.26682333736736935 1.0 ['ENSG00000140986|ENST00000268661|RPL3L'] 20232 12032 ENLLKSLQAPE True NCI_RA007_Epitope_Rep1 1240.66631678928 1240.66520993586 50.789 2 -0.8638967409670936 0.26682333736736935 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 135724 22384 WLVKRLHKL True NCI_RA007_Epitope_Rep3 1191.7604323879898 1191.75932993586 97.28 2 -0.8639218830128419 0.26682333736736935 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 32975 4307 GIELSWPRPD True H1975_Epitope_Rep3 1168.58767254576 1168.58656993586 21.681 2 -0.8639249065086353 0.26682333736736935 1.0 ['ENST00000372756.5_1_20:43922234-43922381:-|nuORF'] 19737 16511 ELRSGIIR True NCI_RA007_Epitope_Rep3 942.5610638750999 942.5605149679301 72.743 1 -0.8639374123240785 0.26682333736736935 1.0 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 79683 16489 PDSFNIPGSS True PC9_epitope_Rep2 1019.45598966987 1019.45488993586 68.667 2 -0.8639673127150138 0.2668336546444704 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 30219 16073 FYTDCIQQCS True PC9_epitope_Rep5 1206.4685455828599 1206.46744993586 66.814 2 -0.8640040243955924 0.2668580434537881 1.0 ['ENSG00000072858|ENST00000264852|SIDT1', 'nc|ENSG00000072858|Q9NXL6-2|SIDT1', 'ENST00000481891.1_1_3:113334876-113338574:+|nuORF'] 63094 20615 LLQQLWYKARY True H1975_Epitope_Rep3 1480.8190694629202 1480.8179699358602 86.158 2 -0.8640277501220454 0.2668646047336279 1.0 ['ENSG00000100625|ENST00000216513|SIX4'] 110466 15642 TFETGVPF True NCI_RA007_Epitope_Rep1 896.4279840168798 896.42743496793 64.935 1 -0.8641080152131946 0.2668646047336279 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN'] 12458 20170 DIYKKQLL True PC9_epitope_Rep1 1019.60153170475 1019.60042993586 82.413 2 -0.8642963430742262 0.2668917968200366 1.0 ['nc|ENSG00000174776|Q8IV35-3|CFAP337', 'ENSG00000174776|ENST00000682715|WDR49', 'nc|ENSG00000174776|Q8IV35-2|CFAP337'] 41724 5580 IALIGSGW True NCI_RA007_Epitope_Rep5 815.45413919507 815.45304993586 28.15 2 -0.864297626107575 0.2668917968200366 1.0 ['ENSG00000125734|ENST00000264080|GPR108'] 83928 12908 PVQPAELL True PC9_epitope_Rep6 865.49091862661 865.48982993586 61.183 2 -0.8643158332413813 0.2668917968200366 1.0 ['ENSG00000168255|ENST00000513506|POLR2J3'] 9197 7503 AVLWTAAK True PC9_epitope_Rep3 858.4963383602199 858.49524993586 33.863 2 -0.8643219201704605 0.2668917968200366 1.0 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1', 'KNDC1|p.S566Vfs*58|1|0.38|ENSG00000171798|chr10:133195782-133195782|C/-|frameshift_variant'] 30876 8456 GAPQQFPYPP True H1975_Epitope_Rep2 1100.52909504048 1100.5279899358602 37.479 2 -0.8644795903743852 0.26691618240914017 1.0 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 25198 6357 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 33.028 2 -0.8645302161480208 0.26691898584573825 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 3818 7482 AGVGGWRRIGA True NCI_RA007_Epitope_Rep4 1098.60466002258 1098.6035699358602 35.425 2 -0.8645399217940984 0.26691898584573825 1.0 ['ENST00000546753.5_2_12:95867878-95867977:+|nuORF'] 134103 15810 VYKTIMEQF True PC9_epitope_Rep6 1157.57908200801 1157.5779899358602 73.076 2 -0.864545229130703 0.26691898584573825 1.0 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 108778 5175 SYSSTFHSLEE True NCI_RA007_Epitope_Rep5 1285.5462612262502 1285.54516993586 26.599 2 -0.8645806072454689 0.266928347331842 1.0 ['ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000162825|ENST00000698833|NBPF20', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 15644 7612 EATAQVNPLY True H1975_Epitope_Rep2 1104.54513902744 1104.5440499358601 34.232 2 -0.8646076698725014 0.266928347331842 1.0 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENST00000425115.1_1_3:44751367-44751973:-|nuORF'] 20941 6452 EQNWRQHREAY True NCI_RA007_Epitope_Rep2 1515.69672248411 1515.69508490379 29.706 3 -0.8646084544106462 0.266928347331842 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 55997 15032 LASINSTV True PC9_epitope_Rep5 803.43888305375 803.43778993586 62.825 2 -0.8646139457470007 0.266928347331842 1.0 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 133140 17891 VVQSVKHTKR True NCI_RA007_Epitope_Rep2 1180.70403971068 1180.70294993586 74.329 2 -0.8647029802086366 0.266928347331842 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 100485 17594 SLAQLLGKISN True NCI_RA007_Epitope_Rep3 1142.6659228664598 1142.66482993586 77.167 2 -0.864722471970029 0.26693395231061406 1.0 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 132032 12191 VTSTITITPV True PC9_epitope_Rep5 1030.5910265906998 1030.58992993586 51.882 2 -0.8647264558837493 0.26693395231061406 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'nc|ENSG00000118407|Q7Z7B0-3|FILIP1'] 82867 3054 PRSSSLWIELC True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 16.664 3 -0.8647426437911753 0.26693395231061406 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 83224 8548 PSVPPHFHL True PC9_epitope_Rep2 1029.53960015453 1029.53850993586 38.241 2 -0.8647542633929239 0.26693395231061406 1.0 ['ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 84977 6272 QEETKTVL True PC9_epitope_Rep2 946.4971262058599 946.49602993586 29.522 2 -0.8648182321765796 0.26693395231061406 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 116685 15451 TVCQRCWLL True PC9_epitope_Rep3 1120.55215606752 1120.5510499358602 64.585 2 -0.8648204463676737 0.26693395231061406 1.0 ['ENSG00000084092|ENST00000264230|NOA1'] 65469 22152 LRKLIFIKKK True PC9_epitope_Rep3 1285.89619758481 1285.89510993586 90.493 2 -0.8649067895880874 0.26694050951650794 1.0 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 105537 11711 SSASIGDMEKE True PC9_epitope_Rep1 1152.49686850568 1152.4957699358602 49.921 2 -0.8649098459629789 0.26694050951650794 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 92191 24429 RLGRHRGRLE True H1975_Epitope_Rep1 1248.72756911992 1248.72592490379 101.27 3 -0.8649189516361137 0.2669433112955409 1.0 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF'] 80537 6647 PGPLSKQGS True NCI_RA007_Epitope_Rep2 869.46068112749 869.46013496793 30.465 1 -0.8649572534041846 0.2669433112955409 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 127919 8198 VPGTWRDGVRV True H1975_Epitope_Rep3 1240.66765420196 1240.66654993586 36.515 2 -0.8649687250965719 0.2669433112955409 1.0 ['ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22'] 46165 21920 ISLMRAKRF True PC9_epitope_Rep5 1120.65391871412 1120.6528299358602 89.357 2 -0.8650548322660107 0.2669536228214542 1.0 ['ENST00000323883.11_1_10:22839601-22839673:-|nuORF'] 10536 13398 CLLQCSLWQD True H1975_Epitope_Rep1 1207.53656557303 1207.5354699358602 56.647 2 -0.8651099538314786 0.2670061328982164 1.0 ['NBEA|p.V891L|1|0.04|ENSG00000172915|chr13:35157097-35157097|G/T|missense_variant'] 123766 19800 VGRIQFAV True PC9_epitope_Rep4 888.5181364339599 888.51702993586 84.288 2 -0.8651955028147151 0.2670305093328457 1.0 ['ZAN|p.E2695Rfs*83|1|0.75|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant', 'ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.A2019Pfs*35|1|0.1|ENSG00000146839|chr7:100775692-100775692|C/-|frameshift_variant', 'ZAN|p.Q2488Rfs*12|1|0.3|ENSG00000146839|chr7:100791044-100791044|C/-|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 129436 20550 VRGRARAA True PC9_epitope_Rep6 855.5151167421899 855.51400993586 91.773 2 -0.8652659635008082 0.2670614380555868 1.0 ['ENST00000591735.2_1_19:1491211-1495711:+|nuORF'] 11549 22643 DFSAGLII True PC9_epitope_Rep2 834.44871946146 834.4481749679301 92.591 1 -0.865271893635842 0.2670614380555868 1.0 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 113234 9351 TLQRIYSL True PC9_epitope_Rep1 992.5654805492 992.56438993586 40.826 2 -0.8653027541898958 0.2670614380555868 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 141437 12315 YTFHFLYF True NCI_RA007_Epitope_Rep3 1136.5331177917599 1136.53202993586 55.616 2 -0.8653200109741763 0.2670717470498052 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 20152 9217 ENDWLTPSP True H1975_Epitope_Rep3 1057.47163973401 1057.4705499358602 40.445 2 -0.8653709594299158 0.2670886075949367 1.0 ['EOMES|p.R469W|1|0.13|ENSG00000163508|chr3:27717726-27717726|G/A|missense_variant'] 137840 6114 YERYEEHEEY True H1975_Epitope_Rep1 1445.5735386032502 1445.57244993586 28.586 2 -0.8653777669968351 0.2670886075949367 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 59708 14117 LGAWRGEGLLQ True PC9_epitope_Rep3 1198.64585612822 1198.64474993586 59.386 2 -0.8653779535799444 0.2670886075949367 1.0 ['ENST00000343242.8_1_7:1580346-1581177:+|nuORF'] 66934 12124 LSNTKVLEIP True PC9_epitope_Rep1 1112.6441247927198 1112.64302993586 51.498 2 -0.865423553886898 0.26711201743899865 1.0 ['nc|ENSG00000131196|O95644-8|NFATC1', 'nc|ENSG00000131196|O95644-11|NFATC1', 'nc|ENSG00000131196|O95644-3|NFATC1', 'nc|ENSG00000131196|O95644-10|NFATC1', 'nc|ENSG00000131196|O95644-2|NFATC1', 'nc|ENSG00000131196|O95644-5|NFATC1', 'nc|ENSG00000131196|O95644-4|NFATC1', 'nc|ENSG00000131196|O95644-6|NFATC1', 'ENSG00000131196|ENST00000427363|NFATC1', 'nc|ENSG00000131196|O95644-17|NFATC1'] 79867 16793 PEKQRNKVLLE True NCI_RA007_Epitope_Rep3 1352.77759857376 1352.77650993586 73.904 2 -0.8654251829303382 0.26711201743899865 1.0 ['nc|ENSG00000171004|Q96MM7-2|HS6ST2', 'nc|ENSG00000171004|Q96MM7-3|HS6ST2', 'nc|ENSG00000171004|Q96MM7|HS6ST2', 'ENSG00000171004|ENST00000370833|HS6ST2'] 61773 6500 LLALHSAA True PC9_epitope_Rep1 794.4650382319401 794.46394993586 29.805 2 -0.865478209438359 0.26711201743899865 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 86749 14727 QLLHHRRSRYQ True H1975_Epitope_Rep3 1492.81236137304 1492.81126993586 62.022 2 -0.8655404667421489 0.26711201743899865 1.0 ['ENSG00000116649|ENST00000376957|SRM'] 127808 11818 VPEGAYLEFFI True NCI_RA007_Epitope_Rep4 1283.64379043955 1283.64214490379 52.438 3 -0.865548733681591 0.26711201743899865 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 25108 12017 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 54.395 2 -0.8656079634756069 0.26717482104434165 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 22818 4806 EVAAVAVLMC True PC9_epitope_Rep6 1004.5034745395999 1004.50236993586 25.964 2 -0.8656091684881562 0.26717482104434165 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 62089 13162 LLDYFLFLNR True NCI_RA007_Epitope_Rep2 1312.7179584393198 1312.7168699358601 55.83 2 -0.8657315723302782 0.2672835686561287 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1'] 65115 19006 LQMLELITR True PC9_epitope_Rep1 1115.63726559047 1115.6361699358602 77.895 2 -0.8657820257100306 0.2672863551349299 1.0 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 112646 9840 TLFLITWTMQP True H1975_Epitope_Rep3 1349.70534515029 1349.7042499358602 42.878 2 -0.865801118885283 0.2672863551349299 1.0 ['ENSG00000016490|ENST00000394711|CLCA1'] 112771 6897 TLHRLEPSP True PC9_epitope_Rep3 1048.56654317836 1048.5654499358602 31.544 2 -0.8658220695894212 0.2672863551349299 1.0 ['ENST00000467808.5_1_X:100879846-100879927:+|nuORF'] 53278 22227 KQKLLLKKRHI True PC9_epitope_Rep3 1403.94527303555 1403.9436149037901 90.781 3 -0.8658306106888943 0.2672994445616255 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 84313 8516 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 37.594 2 -0.8658349716759784 0.2672994445616255 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 15367 8176 EAGRNSSPW True H1975_Epitope_Rep2 1002.4519073489399 1002.45080993586 36.399 2 -0.8658788404369963 0.2672994445616255 1.0 ['ENST00000520655.5_1_8:42128987-42129218:+|nuORF'] 102883 13396 SPAIQEMV True PC9_epitope_Rep2 873.42660411789 873.4260549679301 56.809 1 -0.8658811635969553 0.2672994445616255 1.0 ['nc|ENSG00000100842|O43281-3|EFS', 'nc|ENSG00000100842|O43281-2|EFS', 'ENSG00000100842|ENST00000216733|EFS'] 114651 10444 TQEELMNSNQM True H1975_Epitope_Rep2 1323.54350142827 1323.5424099358602 45.189 2 -0.865959235447849 0.2673059887228089 1.0 ['ENSG00000136935|ENST00000373555|GOLGA1'] 3195 16249 AGEGQERRSPT True PC9_epitope_Rep5 1186.5690623594999 1186.5679699358602 67.491 2 -0.8659726419662006 0.2673059887228089 1.0 ['ENSG00000136040|ENST00000258526|PLXNC1'] 123384 18438 VGMKLWVE True PC9_epitope_Rep6 960.5102741721998 960.50916993586 83.565 2 -0.866000308738753 0.2673162912342867 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 58066 8528 LEINGVVYTG True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 40.281 2 -0.8660998877577488 0.26731907594100196 1.0 ['ENSG00000205143|ENST00000378909|ARID3C'] 72649 22913 MLYIIRRK True PC9_epitope_Rep5 1091.6637551218298 1091.66317496793 93.127 1 -0.866126519914053 0.26731907594100196 1.0 ['ENST00000367210.2_2_1:203822645-203822732:+|nuORF'] 75318 14429 NILSLINVN True PC9_epitope_Rep6 998.5760452329 998.57494993586 67.395 2 -0.8661403409571068 0.26731907594100196 1.0 ['nc|ENSG00000164253|Q9HAD4-2|WDR41', 'ENSG00000164253|ENST00000296679|WDR41', 'ENST00000502528.5_1_5:76728962-76747206:-|nuORF'] 30349 11832 GAASAPQPPAP True PC9_epitope_Rep4 962.4821448480599 962.48104993586 53.283 2 -0.8661776632604566 0.26732464464971106 1.0 ['nc|ENSG00000145808|Q8TE59|ADAMTS19', 'ENSG00000145808|ENST00000274487|ADAMTS19'] 119337 11242 VAPAHVPAP True PC9_epitope_Rep3 857.47593726881 857.47484993586 48.251 2 -0.8661877512583486 0.26732464464971106 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 140975 14468 YSGGGSGC True NCI_RA007_Epitope_Rep5 686.2329896917801 686.2324449679301 62.332 1 -0.8661913060127076 0.26732464464971106 1.0 ['ENSG00000203782|ENST00000368742|LORICRIN'] 140455 26366 YRHRRKYF True NCI_RA007_Epitope_Rep5 1224.6628436050398 1224.6617499358601 109.01 2 -0.866201677776455 0.26732464464971106 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 46088 7529 ISHFFCDIRP True PC9_epitope_Rep1 1233.59646340765 1233.5948249037901 33.777 3 -0.8662050939653685 0.26732464464971106 1.0 ['nc|ENSG00000249730|P0C629|OR10J4'] 25053 21335 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 87.307 2 -0.8662316206944076 0.26732464464971106 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 73172 5958 MRVLVGGG True NCI_RA007_Epitope_Rep3 787.4374435851099 787.43634993586 30.416 2 -0.8662935429943207 0.2673490046114048 1.0 ['ENSG00000100445|ENST00000399395|SDR39U1', 'ENST00000556548.5_1_14:24911464-24911975:-|nuORF'] 122594 5339 VGFFREAIRN True NCI_RA007_Epitope_Rep4 1207.6461904813898 1207.6450899358601 27.1 2 -0.8663152384042923 0.26737336388814686 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1'] 75499 12409 NKLTYWYHL True PC9_epitope_Rep5 1236.62914343492 1236.6274949037902 52.73 3 -0.8663580004905173 0.26739396325090325 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|111|2|sense'] 86888 23158 QLRSKEVSV True PC9_epitope_Rep1 1044.5927579262 1044.5916699358602 93.872 2 -0.8663649722299483 0.26739396325090325 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 25074 10796 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 46.596 2 -0.8663993838148256 0.26740426249789123 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 29470 13655 FVERWDQLTLS True H1975_Epitope_Rep3 1392.7037649271597 1392.70266993586 57.816 2 -0.8664534929082525 0.2674211007239755 1.0 ['ENSG00000100234|ENST00000266085|TIMP3'] 63213 12742 LLSDPALNL True NCI_RA007_Epitope_Rep4 954.53859709502 954.53750993586 56.07 2 -0.8664837884815197 0.2674211007239755 1.0 ['ENSG00000183196|ENST00000332272|CHST6', 'CHST5|p.I219T|1|0.37|ENSG00000135702|chr16:75529729-75529729|A/G|missense_variant', 'ENSG00000135702|ENST00000336257|CHST5', 'nc|ENSG00000135702|Q9GZS9-2|CHST5'] 63184 8907 LLRRWWRPICY True H1975_Epitope_Rep2 1560.8499927517198 1560.8488899358601 39.228 2 -0.8665073323972333 0.2674211007239755 1.0 ['ENST00000513185.1_1_5:98109449-98109824:+|nuORF'] 97079 16600 SDFLPRRSRVH True H1975_Epitope_Rep1 1368.7374650972802 1368.73636993586 69.229 2 -0.8666912725146377 0.2674876293297346 1.0 ['ENST00000536837.1_1_12:121837446-121837686:-|nuORF'] 61089 9108 LIHLYQVLKY True NCI_RA007_Epitope_Rep2 1288.75434394804 1288.7532499358601 40.034 2 -0.8667266097285593 0.2674979265361204 1.0 ['ENST00000378509.8_1_7:133976258-133976573:-|nuORF'] 100773 11159 SLEDVVID True NCI_RA007_Epitope_Rep3 888.44402800384 888.44292993586 50.999 2 -0.8667910719879381 0.26750446309338055 1.0 ['ENSG00000111261|ENST00000535902|MANSC1'] 140462 27651 YRHRRKYF True PC9_epitope_Rep3 1224.6628436050398 1224.6617499358601 114.26 2 -0.8668012152493663 0.26750446309338055 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 22798 5973 EVAAVAVLMC True PC9_epitope_Rep1 1004.5034745395999 1004.50236993586 27.789 2 -0.8668291235626173 0.2675240705601237 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 101975 15569 SLQHQHLLGY True H1975_Epitope_Rep2 1194.61455599994 1194.6134499358602 65.042 2 -0.8668411612115579 0.2675240705601237 1.0 ['FAM216B|p.Q71H|1|0.17|ENSG00000179813|chr13:42786876-42786876|G/T|missense_variant'] 117528 7492 TVSARDRDAA True PC9_epitope_Rep1 1060.52613491836 1060.5250299358602 33.637 2 -0.866854972113277 0.2675240705601237 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 127877 10349 VPGGAPAPP True PC9_epitope_Rep1 761.40718900265 761.40608993586 44.689 2 -0.8668849634663651 0.2675240705601237 1.0 ['ENST00000571503.1_2_17:79632233-79633555:-|nuORF'] 130321 22287 VSITSSLAW True PC9_epitope_Rep1 962.50729696674 962.50618993586 90.538 2 -0.866886498382232 0.2675240705601237 1.0 ['ENSG00000092330|ENST00000267415|TINF2', 'nc|ENSG00000092330|Q9BSI4-2|TINF2'] 83903 16929 PVPTLWNEPAE True H1975_Epitope_Rep3 1251.6135529404298 1251.6129749679299 70.692 1 -0.866982979099616 0.2675240705601237 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 81874 8736 PLRLHSEK True H1975_Epitope_Rep1 978.5610638751 978.55996993586 38.531 2 -0.8670159342708132 0.26753436595170493 1.0 ['ENSG00000128917|ENST00000249749|DLL4'] 72384 17137 MKFLIPLP True H1975_Epitope_Rep2 957.5721461527698 957.57104993586 71.192 2 -0.8670363365409485 0.2675409006577838 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|184|2|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|43', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|43', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|43', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|43', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|43', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|43'] 141539 10312 YTMEVEAK True H1975_Epitope_Rep1 969.4477334852899 969.4471849679301 44.611 1 -0.8670531962836684 0.2675409006577838 1.0 ['nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6', 'ENSG00000253305|ENST00000520790|PCDHGB6', 'PCDHGB6|p.G324E|1|0.37|ENSG00000253305|chr5:141409173-141409173|G/A|missense_variant'] 64908 17699 LQEDVKKAELH True PC9_epitope_Rep3 1308.70376492716 1308.70266993586 73.276 2 -0.867061705739791 0.26756148981026 1.0 ['ENSG00000152240|ENST00000282058|HAUS1', 'nc|ENSG00000152240|Q96CS2-2|HAUS1'] 22858 19967 EVCRRYLWK True NCI_RA007_Epitope_Rep2 1251.6546469901098 1251.6535499358602 82.667 2 -0.8670789448864177 0.26756148981026 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 56413 7158 LDEDSEGSDDK True H1975_Epitope_Rep1 1208.4680704751997 1208.46696993586 32.558 2 -0.8671041789368167 0.26756703580864577 1.0 ['CEBPZ|p.E892K|1|0.26|ENSG00000115816|chr2:37211969-37211969|C/T|missense_variant'] 13523 9524 DNQYTWTDKWR True NCI_RA007_Epitope_Rep1 1511.6793410844698 1511.67769490379 41.042 3 -0.8671169239672799 0.26756703580864577 1.0 ['ENSG00000260314|ENST00000569591|MRC1'] 12310 14399 DIPEWRKDI True PC9_epitope_Rep5 1170.6033226099 1170.6022299358601 60.386 2 -0.8672012424852799 0.26756703580864577 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 826 7355 ACLGAGEY True H1975_Epitope_Rep2 782.32689007662 782.32634496793 33.231 1 -0.8672054590850244 0.26756703580864577 1.0 ['ENST00000375128.4_1_9:100456034-100459626:-|nuORF'] 103255 18549 SPLIQKINRR True NCI_RA007_Epitope_Rep3 1223.74623887583 1223.7451499358601 81.162 2 -0.8672236333840779 0.26756703580864577 1.0 ['nc|ENSG00000185594|Q6RVD6|SPATA8'] 77410 6678 NSIC[Carbamidomethyl]EM[Oxidation]NKIY True H1975_Epitope_Rep3 1286.56350925673 1286.5624099358602 30.642 2 -0.8672280213824317 0.26756703580864577 1.0 ['nc|ENSG00000205846|Q6EIG7-2|CLEC6A', 'ENSG00000205846|ENST00000382073|CLEC6A'] 12904 14914 DLKELIPEFYY True PC9_epitope_Rep6 1428.7176836557999 1428.7160249037902 69.361 3 -0.8672472351730411 0.2675773290048765 1.0 ['NBEA|p.V2431L|1|0.47|ENSG00000172915|chr13:35593442-35593442|G/T|missense_variant'] 25177 13369 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 59.328 2 -0.8673189564686967 0.2675876219118019 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 32239 5302 GEYLCMCG True H1975_Epitope_Rep3 874.3023322048999 874.30122993586 25.473 2 -0.8673599099890473 0.2676119675655925 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 25093 23119 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 96.534 2 -0.8673827829631628 0.26763908210727483 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 85413 5972 QEVWRQRYQS True H1975_Epitope_Rep2 1378.6741961343798 1378.67254490379 27.95 3 -0.8673871358378877 0.26763908210727483 1.0 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 47969 10183 IYIYTLKGMC True NCI_RA007_Epitope_Rep2 1203.60318858087 1203.60208993586 44.197 2 -0.8673950320506872 0.26763908210727483 1.0 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525395.2_1_15:101598200-101605355:+|nuORF', 'ENST00000525284.5_1_15:101602697-101609050:+|nuORF'] 100701 22260 SLDQYCEQMWH True PC9_epitope_Rep5 1438.56457122602 1438.5634699358602 90.631 2 -0.8674042349230857 0.26763908210727483 1.0 ['SEMA3D|p.G747Afs*10|1|0.46|ENSG00000153993|chr7:84999534-84999534|C/-|frameshift_variant', 'ENSG00000153993|ENST00000284136|SEMA3D'] 55986 7967 LASERAITV True NCI_RA007_Epitope_Rep5 958.5447451046199 958.54364993586 37.333 2 -0.8674514452140457 0.26764937327862404 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000471603.6_1_16:2152958-2153681:-|nuORF', 'ENST00000532739.1_1_16:16465196-16470832:+|nuORF', 'ENST00000415938.7_1_16:2152605-2162466:-|nuORF', 'ENST00000480227.5_1_16:2149506-2153780:-|nuORF', 'ENST00000483731.5_1_16:2153201-2162466:-|nuORF'] 121455 15992 VEYCEVCCE True H1975_Epitope_Rep2 1075.3660546602698 1075.36547496793 66.712 1 -0.8674888669278689 0.26770181971474744 1.0 ['ENST00000490777.2_10:133754257-133757569:+|nuORF'] 15110 11584 DYYDRQSLHRY True PC9_epitope_Rep4 1514.69024012134 1514.68914993586 52.317 2 -0.8675414863212783 0.26770458633093525 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant'] 29155 9680 FTPPVVNVTWL True PC9_epitope_Rep4 1271.69140933831 1271.68975490379 44.864 3 -0.8676092371004762 0.26770458633093525 1.0 ['ENSG00000204287|ENST00000395388|HLA-DRA'] 114291 25510 TPPRKRKKIVV True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 105.73 3 -0.8676299945328394 0.26770458633093525 1.0 ['ENST00000563306.5_1_16:46729840-46730008:+|nuORF', 'ENST00000567000.2_1_16:46729456-46731494:+|nuORF', 'ENST00000575571.5_1_16:46728976-46731494:+|nuORF', 'ENSG00000091651|ENST00000219097|ORC6'] 113538 17605 TLTQFHFL True PC9_epitope_Rep1 1005.52836676449 1005.52726993586 72.51 2 -0.8676450326998162 0.2677214033805904 1.0 ['nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 11140 7 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 0.030871 2 -0.8676654212347629 0.2677214033805904 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 37720 7046 GWCQENGR True NCI_RA007_Epitope_Rep4 948.3871989173998 948.38610993586 33.729 2 -0.867669774050708 0.2677214033805904 1.0 ['nc|ENSG00000154655|Q8NA19-2|L3MBTL4', 'ENSG00000154655|ENST00000317931|L3MBTL4', 'nc|ENSG00000154655|Q8NA19|L3MBTL4'] 53441 23789 KRELKKKRNLQ True H1975_Epitope_Rep2 1439.9048647755496 1439.90320490379 98.01 3 -0.8678187975612369 0.26773445732349843 1.0 ['ENST00000395603.7_1_X:76937740-76937824:-|nuORF'] 98091 7487 SERREFERNFY True PC9_epitope_Rep4 1531.7167892223497 1531.7151449037901 36.159 3 -0.8678210147435531 0.26773445732349843 1.0 ['ENST00000257290.9_1_4:55095294-55095372:+|nuORF'] 31840 12156 GEISHVKK True PC9_epitope_Rep1 896.50796567308 896.50686993586 51.622 2 -0.8678530969787357 0.26773445732349843 1.0 ['CON__Q3TTY5'] 15203 13778 EADKLSIW True H1975_Epitope_Rep1 960.4916469026 960.49109496793 58.14 1 -0.8678605058600138 0.26773445732349843 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000487319.1_1_7:140048309-140048561:-|nuORF', 'ENST00000477571.5_1_7:139997281-140048561:-|nuORF'] 16552 13854 EELSDAMHGTY True H1975_Epitope_Rep2 1251.5077675425498 1251.5066699358601 58.435 2 -0.8679032575255887 0.26774098374474903 1.0 ['ENSG00000179399|ENST00000377067|GPC5'] 65623 5999 LSAELFHLSG True NCI_RA007_Epitope_Rep5 1072.5553097883198 1072.5542099358602 29.758 2 -0.8679109272814096 0.26774098374474903 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 25055 21515 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 88.028 2 -0.8679237302675548 0.2677502739456604 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 99217 10242 SHLRSFLER True PC9_epitope_Rep5 1143.61489035311 1143.61324490379 44.383 3 -0.8679462123044299 0.2677502739456604 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q3877Hfs*4|1|0.05|ENSG00000103657|chr15:63640421-63640422|GT/-|frameshift_variant', 'HERC1|p.V3879Rfs*6|1|0.07|ENSG00000103657|chr15:63640418-63640419|-/TTGTATTTCT|frameshift_variant', 'ENST00000560519.1_1_15:64026898-64041594:-|nuORF'] 35334 15674 GRRRLHLFGRD True PC9_epitope_Rep5 1381.7803329687697 1381.77922993586 65.301 2 -0.867972430951904 0.2677502739456604 1.0 ['ENSG00000145388|ENST00000388822|METTL14'] 131674 4932 VTMLEKESCL True NCI_RA007_Epitope_Rep4 1151.55663231127 1151.55552993586 25.433 2 -0.8679823628920292 0.2677502739456604 1.0 ['ENST00000590054.5_1_19:11457292-11462950:+|nuORF', 'nc|ENSG00000183401|P0C7I6-7|CCDC159', 'ENSG00000183401|ENST00000458408|CCDC159', 'ENST00000592723.5_1_19:11460627-11464155:+|nuORF', 'nc|ENSG00000183401|P0C7I6-6|CCDC159', 'ENST00000589016.5_1_19:11457292-11461788:+|nuORF', 'nc|ENSG00000183401|P0C7I6-8|CCDC159', 'ENST00000588821.5_1_19:11457264-11461788:+|nuORF'] 29278 6102 FVAPADVRRL True NCI_RA007_Epitope_Rep3 1142.6560268890998 1142.65438490379 30.992 3 -0.8679847061483443 0.2677502739456604 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9', 'nc|ENSG00000185453|Q86XI8|ZSWIM9'] 122718 17752 VGGHCRGP True PC9_epitope_Rep5 781.3653412740099 781.36424993586 73.302 2 -0.8680387514218387 0.2678308022983016 1.0 ['ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 31894 17259 GELQAQVKKNQ True PC9_epitope_Rep4 1241.67279915205 1241.67170993586 74.393 2 -0.8681083967893352 0.267836323027434 1.0 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 22808 6078 EVAAVAVLMC True PC9_epitope_Rep3 1004.5034745395999 1004.50236993586 28.428 2 -0.8681087515315193 0.267836323027434 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 140396 24223 YRETDKKKKK True PC9_epitope_Rep5 1322.7670338900596 1322.7653849037902 98.18 3 -0.8681166548902032 0.267836323027434 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 138735 14857 YIRDSTIAV True PC9_epitope_Rep4 1036.5553097883198 1036.5542099358602 65.086 2 -0.8681337365674608 0.267836323027434 1.0 ['nc|ENSG00000147127|Q5JT25-2|RAB41', 'ENSG00000147127|ENST00000374473|RAB41'] 123887 17550 VGRRRRHR True NCI_RA007_Epitope_Rep3 1091.6649092937098 1091.66437496793 76.996 1 -0.8681416940022886 0.267836323027434 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 112401 13570 TLCCFCCP True PC9_epitope_Rep3 888.30022402992 888.29912993586 57.252 2 -0.8681462814041476 0.267836323027434 1.0 ['STX11|p.R276L|1|0.23|ENSG00000135604|chr6:144187454-144187454|G/T|missense_variant', 'ENSG00000135604|ENST00000367568|STX11'] 69381 5958 LTVWCSLP True PC9_epitope_Rep2 917.46807500705 917.46696993586 28.306 2 -0.8681814993477995 0.26783908304303855 1.0 ['ENST00000216044.9_1_22:39128202-39128355:+|nuORF', 'ENST00000544928.1_22:39128030-39128449:+|nuORF'] 120898 19383 VENIVKLYK True PC9_epitope_Rep1 1104.6542955536 1104.6531899358602 79.366 2 -0.8682079932242581 0.26783908304303855 1.0 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 82865 2588 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 14.599 3 -0.8682185249371357 0.26783908304303855 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 25076 13575 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 57.444 2 -0.8682425610618785 0.2678493672130687 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 92389 10747 RLPTPEQI True PC9_epitope_Rep1 952.5341804209199 952.53308993586 46.226 2 -0.8682470017702848 0.2678558887562329 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 119790 3384 VCLPSADDD True PC9_epitope_Rep3 933.37496246785 933.37386993586 18.138 2 -0.8682505400627012 0.2678558887562329 1.0 ['ENSG00000168928|ENST00000303037|CTRB2', 'ENSG00000168925|ENST00000361017|CTRB1'] 115929 5798 TSGLKESLT True NCI_RA007_Epitope_Rep3 934.49712620586 934.49602993586 29.784 2 -0.868307485529896 0.2678661722568684 1.0 ['ENST00000249883.9_1_3:134075208-134075304:-|nuORF'] 94436 19829 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 82.258 2 -0.868443932879808 0.2678905010042558 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 10287 25939 CCPHSCCC True H1975_Epitope_Rep1 854.20019271882 854.19964496793 107.65 1 -0.8684879048442594 0.2679007837298801 1.0 ['ILDR2|p.I259Sfs*15|1|0.12|ENSG00000143195|chr1:166935407-166935407|G/-|frameshift_variant', 'ILDR2|p.G255Afs*19|1|0.12|ENSG00000143195|chr1:166935417-166935417|C/-|frameshift_variant', 'ENSG00000143195|ENST00000271417|ILDR2'] 72539 16911 MLKSSTLII True PC9_epitope_Rep6 1004.59400379616 1004.59290993586 77.576 2 -0.8685136440932716 0.267917585427171 1.0 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM'] 83054 15424 PSLLDDDGY True PC9_epitope_Rep5 993.4291062156899 993.42800993586 64.337 2 -0.868526030249678 0.267917585427171 1.0 ['ENSG00000082397|ENST00000341928|EPB41L3'] 48789 14074 KDLVLEPLS True PC9_epitope_Rep6 1012.580461907 1012.57936993586 66.007 2 -0.8685274704073088 0.267917585427171 1.0 ['KDM5A|p.D1106V|1|0.42|ENSG00000073614|chr12:309864-309864|T/A|missense_variant'] 121584 7942 VFETPEAQP True H1975_Epitope_Rep1 1016.4814761417199 1016.48036993586 35.498 2 -0.868578192480018 0.2679278671947417 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'ENST00000511112.2_1_4:134084133-134129298:+|nuORF'] 29141 8072 FTNFCLFFYK True NCI_RA007_Epitope_Rep2 1328.6263665535996 1328.6252699358602 36.031 2 -0.8686064152072501 0.26795219302557477 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'ENST00000594346.1_1_13:99098225-99098510:+|nuORF', 'ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1'] 5569 9590 ANASKWSP True H1975_Epitope_Rep2 859.41881631551 859.41770993586 41.863 2 -0.8686205607785966 0.2679624740183136 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'ENST00000560078.1_1_15:41101513-41102320:+|nuORF', 'ENST00000439365.6_2_19:47543749-47548643:+|nuORF', 'nc|ENSG00000166140|Q96K21-3|ZFYVE19'] 33003 16187 GIGKDIRAL True PC9_epitope_Rep5 941.5658149023699 941.56470993586 67.252 2 -0.8686499602364701 0.2679727547222807 1.0 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 16433 17399 EEKSLLNLS True PC9_epitope_Rep3 1031.54989005471 1031.54937496793 72.094 1 -0.8687079543382094 0.26799606796798203 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 69113 9228 LTRHRQVHRLQ True NCI_RA007_Epitope_Rep1 1442.83309681762 1442.83198993586 39.894 2 -0.86871159646042 0.26799606796798203 1.0 ['ENSG00000261221|ENST00000568956|ZNF865'] 19321 9316 ELKTVTYSL True H1975_Epitope_Rep3 1052.57537652656 1052.57426993586 40.829 2 -0.8687143833440594 0.26799606796798203 1.0 ['nc|ENSG00000137834|O43541-4|SMAD6', 'ENSG00000137834|ENST00000288840|SMAD6'] 69125 12413 LTRKYNELL True PC9_epitope_Rep2 1148.65535818276 1148.6537249037901 53.054 3 -0.8687154683473076 0.26799606796798203 1.0 ['nc|ENSG00000120885|P10909-3|CLU', 'nc|ENSG00000120885|P10909-4|CLU', 'ENST00000522299.5_1_8:27457218-27472184:-|nuORF', 'nc|ENSG00000120885|P10909-6|CLU', 'ENSG00000120885|ENST00000316403|CLU', 'nc|ENSG00000120885|P10909-5|CLU', 'nc|ENSG00000120885|P10909-2|CLU'] 69707 18854 LVEFYEEIK True H1975_Epitope_Rep3 1168.6015912743999 1168.6004899358602 79.08 2 -0.8687639899001548 0.26799606796798203 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67044605-67048428:+|nuORF'] 79819 18804 PEFLRPVPQ True PC9_epitope_Rep4 1081.5920296502097 1081.59092993586 80.415 2 -0.8688097898231386 0.2680203901082698 1.0 ['ENSG00000171236|ENST00000306390|LRG1'] 14502 8867 DTKTRKVYK True H1975_Epitope_Rep1 1137.6506071554898 1137.6495099358601 39.02 2 -0.8688389628185511 0.2680447115654665 1.0 ['TENM1|p.N1256K|1|0.24|ENSG00000009694|chrX:124481892-124481892|A/T|missense_variant'] 61486 10430 LKASVPSALAS True PC9_epitope_Rep5 1042.60225998074 1042.60116993586 45.106 2 -0.8688826705395716 0.2680529619073026 1.0 ['SOX5|p.A435S|1|0.06|ENSG00000134532|chr12:23575700-23575700|C/A|missense_variant'] 16158 11125 EEDIEKTRR True H1975_Epitope_Rep1 1174.59421447818 1174.5931099358602 47.757 2 -0.8688943720859847 0.2680529619073026 1.0 ['nc|ENSG00000244754|Q92802-3|N4BP2L2', 'ENST00000380121.7_1_13:33010521-33020605:-|nuORF'] 109171 5789 TAMGKTWHP True NCI_RA007_Epitope_Rep2 1027.49093570995 1027.4898299358601 27.135 2 -0.8689429842859926 0.2680529619073026 1.0 ['nc|ENSG00000089159|P49023-2|PXN', 'nc|ENSG00000089159|P49023|PXN', 'nc|ENSG00000089159|P49023-3|PXN', 'ENSG00000089159|ENST00000637617|PXN', 'nc|ENSG00000089159|P49023-4|PXN', 'ENST00000323871.9_2_12:120650119-120654597:-|nuORF'] 113470 8897 TLSTQFKQAP True H1975_Epitope_Rep3 1119.59242357303 1119.5913299358601 39.219 2 -0.8689859797133432 0.2680529619073026 1.0 ['ENSG00000132382|ENST00000254718|MYBBP1A', 'nc|ENSG00000132382|Q9BQG0-2|MYBBP1A', 'MYBBP1A|p.G533C|1|0.14|ENSG00000132382|chr17:4548270-4548270|C/A|missense_variant', 'ENST00000573175.1_1_17:4451225-4453465:-|nuORF'] 54655 8340 KYLQPKVNP True NCI_RA007_Epitope_Rep4 1085.62332977849 1085.62222993586 38.895 2 -0.8689867986055537 0.2680529619073026 1.0 ['ENST00000456324.5_1_19:36727248-36727317:+|nuORF'] 78873 14897 PAFSRRIG True PC9_epitope_Rep4 902.5086343794198 902.50752993586 65.241 2 -0.8689953554404742 0.2680529619073026 1.0 ['nc|ENSG00000183117|Q96PZ7-3|CSMD1', 'CSMD1|p.N2395Ifs*41|1|0.28|ENSG00000183117|chr8:3091622-3091622|C/-|frameshift_variant', 'CSMD1|p.L2439*|1|0.09|ENSG00000183117|chr8:3087259-3087259|G/-|frameshift_variant', 'nc|ENSG00000183117|Q96PZ7-2|CSMD1', 'ENSG00000183117|ENST00000635120|CSMD1', 'CSMD1|p.L1087Wfs*49|1|0.11|ENSG00000183117|chr8:3359200-3359200|G/-|frameshift_variant', 'ENST00000523488.5_1_8:3008913-3253839:-|nuORF', 'nc|ENSG00000183117|Q96PZ7-4|CSMD1'] 36179 22274 GVAVMKLFNKA True PC9_epitope_Rep1 1176.66890007192 1176.66780993586 90.494 2 -0.8689958376492506 0.2680529619073026 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 123686 24876 VGRAGPAA True PC9_epitope_Rep1 697.3871222644099 697.3865749679301 100.6 1 -0.8690421170309379 0.2680529619073026 1.0 ['ENST00000308497.8_1_4:184827565-184827868:+|nuORF'] 18234 20808 EINTYNPEI True PC9_epitope_Rep3 1091.51350454599 1091.5124099358602 85.309 2 -0.8690579452008236 0.2680529619073026 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 61149 12084 LIKEVNGVP True PC9_epitope_Rep1 967.5702315764698 967.56912993586 51.341 2 -0.8690823057528113 0.2680772794922917 1.0 ['ENST00000357628.7_1_7:124538411-124568991:-|nuORF'] 107620 12683 SVPQAFSP True H1975_Epitope_Rep3 831.41266830591 831.41211496793 53.995 1 -0.8691533749825157 0.2680875559861281 1.0 ['ENST00000424011.6_2_16:66646756-66647017:+|nuORF'] 110150 7531 TENSYYLVME True H1975_Epitope_Rep2 1247.53800504167 1247.53636490379 33.919 3 -0.869207168201943 0.26809783219139616 1.0 ['ENSG00000142149|ENST00000270112|HUNK'] 14292 16811 DSTVLCPLRGR True H1975_Epitope_Rep1 1215.6393908487898 1215.63828993586 70.071 2 -0.8692387891241505 0.2681043439193553 1.0 ['ENST00000560365.5_1_14:24631516-24632718:+|nuORF', 'ENST00000559284.5_1_14:24631519-24633284:+|nuORF'] 134679 11525 VYTAATTY True NCI_RA007_Epitope_Rep3 888.4228986364401 888.42180993586 52.455 2 -0.8692475537220458 0.2681043439193553 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 32572 6565 GGGRGGFP True PC9_epitope_Rep6 703.3401720719899 703.33962496793 33.947 1 -0.8693469434189054 0.2681567383155264 1.0 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 27077 12091 FLGFFMVP True PC9_epitope_Rep3 956.4829967951999 956.48188993586 51.55 2 -0.8693937627055685 0.26816324811523395 1.0 ['ENSG00000174231|ENST00000304992|PRPF8'] 69288 7238 LTTQCELLTQ True NCI_RA007_Epitope_Rep2 1148.5747249035599 1148.57362993586 32.774 2 -0.8694187590078063 0.26816324811523395 1.0 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'nc|ENSG00000168071|A6NC98-5|CCDC88B', 'ENST00000479965.5_1_11:64120415-64123189:+|nuORF'] 40903 8911 HSPLLAAFTTQ True PC9_epitope_Rep2 1184.61897267404 1184.61733490379 39.634 3 -0.8694398341625977 0.26817352239225045 1.0 ['ENST00000454901.1_1_3:172143784-172143991:-|nuORF'] 25081 15474 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 64.894 2 -0.8695083861439713 0.2681978352121969 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 58269 15393 LELRKNHL True PC9_epitope_Rep3 1021.6032630402501 1021.60216993586 64.364 2 -0.8695928961870051 0.2682005783754948 1.0 ['ENST00000524575.5_2_11:101983367-101983394:+|nuORF'] 111642 6270 TIDSTGIL True NCI_RA007_Epitope_Rep5 818.43854870058 818.43744993586 30.797 2 -0.8695958075523892 0.2682005783754948 1.0 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 87080 9543 QNLKKPYP True PC9_epitope_Rep1 986.5549158654999 986.55380993586 41.565 2 -0.8696071250300833 0.2682005783754948 1.0 ['ENSG00000156853|ENST00000287461|ZNF689'] 112387 10883 TLASQLLKRDP True H1975_Epitope_Rep1 1240.71393568804 1240.71282993586 46.821 2 -0.8696283003559319 0.2682108514073138 1.0 ['COG3|p.T275A|1|0.28|ENSG00000136152|chr13:45483335-45483335|A/G|missense_variant'] 131983 4406 VTSGTSTVVC True NCI_RA007_Epitope_Rep1 952.45354714172 952.45244993586 21.252 2 -0.8696719772095836 0.2682276313203627 1.0 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4'] 65747 10753 LSDDFREDPV True H1975_Epitope_Rep3 1191.5407819229902 1191.53968993586 46.44 2 -0.869684387461513 0.2682276313203627 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 136653 7214 WWRRRWTRSQW True NCI_RA007_Epitope_Rep1 1702.8705449554998 1702.86889490379 32.051 3 -0.8696858361810698 0.2682276313203627 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 92492 26849 RLWLKKKHEE True PC9_epitope_Rep1 1365.78810368781 1365.78646490379 109.25 3 -0.8697486227892721 0.2682341381246491 1.0 ['nc|ENSG00000117477|Q5TID7-3|CCDC181', 'ENSG00000117477|ENST00000367806|CCDC181'] 73982 4479 NDAPQFLEK True NCI_RA007_Epitope_Rep5 1060.5189242795998 1060.5178299358602 23.879 2 -0.8697592828616323 0.2682341381246491 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'nc|ENSG00000132554|Q8NE09-2|RGS22'] 78837 9351 PAEDSSPGIS True PC9_epitope_Rep4 958.4243551884199 958.42324993586 43.576 2 -0.8698852125090849 0.26828652040257717 1.0 ['UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion', 'ENSG00000197299|ENST00000355112|BLM', 'ENST00000558825.5_1_15:91337395-91358506:+|nuORF', 'RCCD1-BLM|2|fusion', 'RCCD1-BLM|1|fusion', 'ENST00000560821.1_1_15:91352032-91358506:+|nuORF'] 137359 13970 YDQCENRWTVP True H1975_Epitope_Rep2 1409.60339926289 1409.6023099358601 58.883 2 -0.8699212915671194 0.2682967912186631 1.0 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENC1|p.N566Tfs*10|1|0.09|ENSG00000171617|chr5:74634789-74634789|T/-|frameshift_variant', 'ENSG00000171617|ENST00000302351|ENC1'] 82864 2407 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 13.569 3 -0.8699565364312889 0.2683210982131578 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 99538 11858 SIDVRQKVP True PC9_epitope_Rep6 1040.5978433066398 1040.59674993586 56.822 2 -0.869975729846142 0.268327601936978 1.0 ['nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 4886 16626 ALETERAKAI True PC9_epitope_Rep2 1100.61897267404 1100.6178699358602 69.197 2 -0.8699838367357016 0.268327601936978 1.0 ['MYT1L|p.M448I|1|0.11|ENSG00000186487|chr2:1922425-1922425|C/T|missense_variant'] 71519 10339 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.79936993586 44.806 2 -0.8700144794304308 0.2683519074755074 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 15531 7025 EAPCRNMV True H1975_Epitope_Rep3 918.4051574806599 918.40404993586 31.984 2 -0.8700840480064345 0.2684323550465283 1.0 ['ENST00000559781.5_1_15:81624814-81634044:+|nuORF'] 87850 15944 QRGQGRGP True NCI_RA007_Epitope_Rep5 854.4470967520198 854.44598993586 68.054 2 -0.8700937334680914 0.26844262295081966 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 69721 20143 LVEPLAITFKK True PC9_epitope_Rep1 1257.7696596590097 1257.7680149037901 82.309 3 -0.8701154179287072 0.26845081886691835 1.0 ['ENST00000505451.5_1_4:25314431-25353701:+|nuORF', 'nc|ENSG00000168228|Q9H5U6-3|ZCCHC4', 'ENSG00000168228|ENST00000302874|ZCCHC4'] 41091 6325 HTQTPPQK True NCI_RA007_Epitope_Rep3 935.4824792012299 935.48138993586 31.883 2 -0.8701542993912994 0.26845081886691835 1.0 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2'] 56530 8764 LDGAQTVVVI True H1975_Epitope_Rep3 1013.5757108797299 1013.5746099358599 38.717 2 -0.8701754299553435 0.26845081886691835 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 139490 10258 YLRTHEFPP True PC9_epitope_Rep5 1158.5821932425 1158.58054490379 44.444 3 -0.8701850285838348 0.26845081886691835 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 55935 17714 LARGAKQLV True PC9_epitope_Rep4 954.5974493838199 954.59634993586 76.162 2 -0.8701953690305957 0.26845081886691835 1.0 ['ENST00000589137.5_1_19:36033816-36033978:-|nuORF'] 25082 16569 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 69.178 2 -0.8702362780435264 0.26845081886691835 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25101 2951 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 16.53 2 -0.870262420046475 0.26845081886691835 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 58620 10452 LEQVRMGI True NCI_RA007_Epitope_Rep5 944.5113368013599 944.51022993586 46.835 2 -0.8702646661537394 0.26845081886691835 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 23292 12581 EVQDQLTPPP True H1975_Epitope_Rep2 1122.5557037111398 1122.55460993586 53.488 2 -0.8702833390381903 0.26845081886691835 1.0 ['chr9:135562893-135564312|198|40.19|0.49|6.37|+|1|PAEP,None|2'] 42318 5201 IDYFFFFKQQK True NCI_RA007_Epitope_Rep1 1509.7656369077297 1509.76399490379 24.314 3 -0.8703214542123424 0.26847511858317663 1.0 ['ENST00000246949.9_1_16:3704910-3705863:+|nuORF', 'ENST00000571460.5_1_16:3704910-3712757:+|nuORF'] 30827 6676 GAPEGSPVWSS True NCI_RA007_Epitope_Rep3 1072.48253877088 1072.4814499358602 33.341 2 -0.8704073124901234 0.26849941761742374 1.0 ['GRAMD1B|p.Y647Tfs*19|1|0.31|ENSG00000023171|chr11:123618730-123618730|T/-|frameshift_variant', 'ENSG00000023171|ENST00000635736|GRAMD1B'] 37833 19736 GYISSAFLF True NCI_RA007_Epitope_Rep1 1003.5014833103099 1003.50097496793 80.956 1 -0.8704979276648476 0.2685096828515296 1.0 ['ENSG00000131471|ENST00000308423|AOC3', 'nc|ENSG00000131471|Q16853-2|AOC3'] 57517 15759 LEDMLLFP True PC9_epitope_Rep3 976.49395540172 976.49284993586 65.773 2 -0.8705930464728747 0.26853294043359294 1.0 ['ENST00000602772.5_1_X:73289164-73289383:+|nuORF'] 137949 15671 YFFLRNSSI True PC9_epitope_Rep4 1145.58694426977 1145.58529490379 68.205 3 -0.8705988866388347 0.26853294043359294 1.0 ['OR6C1|p.F64S|1|0.27|ENSG00000205330|chr12:55320790-55320790|T/C|missense_variant'] 14957 8900 DYFEKYGK True NCI_RA007_Epitope_Rep3 1048.48656152216 1048.48546993586 42.095 2 -0.8706089567607785 0.26853294043359294 1.0 ['ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 100857 7812 SLEQVDILWHC True NCI_RA007_Epitope_Rep1 1341.63872214245 1341.63762993586 34.378 2 -0.8706091963529969 0.26853294043359294 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 116577 18627 TTYKRRLQK True H1975_Epitope_Rep2 1192.70403971068 1192.70239490379 77.31 3 -0.8706301556518921 0.26853294043359294 1.0 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN', 'ENST00000558604.1_1_15:89417038-89417709:+|nuORF'] 135193 16380 WERPNFNIK True H1975_Epitope_Rep3 1202.6196413803798 1202.61854993586 68.479 2 -0.8706533624846613 0.268539436204695 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 27405 7748 FLWHTYRWLL True NCI_RA007_Epitope_Rep4 1433.7608263108098 1433.7591749037902 36.481 3 -0.8706808125179114 0.268539436204695 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 25123 6163 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 30.316 2 -0.8707156995734595 0.26855242665319695 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 76549 22023 NQITTTSQSSF True PC9_epitope_Rep5 1212.5622456435601 1212.5611499358602 89.738 2 -0.8707197854511384 0.26855242665319695 1.0 ['ENSG00000174718|ENST00000312561|RESF1'] 123253 23426 VGLIQQQKTFR True PC9_epitope_Rep3 1316.75646920636 1316.75587496793 95.385 1 -0.8707524451031233 0.26855242665319695 1.0 ['ENST00000506227.2_1_4:83501272-83501506:-|nuORF'] 25707 19968 FERRRELRRQK True H1975_Epitope_Rep2 1572.9073243870396 1572.90568490379 82.785 3 -0.8707907581551704 0.26855242665319695 1.0 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'CALD1|p.T726Lfs*13|1|0.67|ENSG00000122786|chr7:134960083-134960083|C/-|frameshift_variant', 'ENSG00000122786|ENST00000361675|CALD1', 'ENST00000475772.5_1_7:134552484-134552556:+|nuORF'] 22819 4879 EVAAVAVLMC True PC9_epitope_Rep6 1004.5034745395999 1004.50236993586 26.298 2 -0.8708665054580264 0.2685626894151981 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 117848 11337 TVYERWWYEKL True NCI_RA007_Epitope_Rep1 1571.7772642205898 1571.77616993586 48.069 2 -0.8708923042523068 0.2685729518892147 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 57119 10002 LDTDLDHILP True NCI_RA007_Epitope_Rep1 1150.58700383942 1150.5859099358602 42.913 2 -0.8709550920019071 0.2685934759733427 1.0 ['nc|ENSG00000125247|Q5T4D3-4|TMTC4', 'nc|ENSG00000125247|Q5T4D3|TMTC4', 'ENSG00000125247|ENST00000342624|TMTC4', 'nc|ENSG00000125247|Q5T4D3-2|TMTC4', 'ENST00000480433.1_1_13:101320808-101322685:-|nuORF'] 95445 7810 RWKEMLDKCL True H1975_Epitope_Rep1 1320.6682484489197 1320.6671499358602 34.995 2 -0.8709613442892383 0.2685934759733427 1.0 ['ENSG00000092850|ENST00000207457|TEKT2'] 123755 17194 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 72.911 1 -0.8711326626042203 0.26860373758347833 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 92453 25069 RLRRLERRRRK True PC9_epitope_Rep5 1594.0240259051295 1594.02238490379 101.57 3 -0.871197755933731 0.2686242599399534 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H'] 139882 12640 YPSHPWSLGP True PC9_epitope_Rep1 1139.53999407735 1139.5383449037902 53.49 3 -0.8712093023965695 0.2686242599399534 1.0 ['ENST00000475468.5_1_10:79793662-79793734:+|nuORF'] 123889 18202 VGRRRRHR True NCI_RA007_Epitope_Rep5 1091.6649092937098 1091.66437496793 76.823 1 -0.8712399048312081 0.268658810325477 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 87318 3489 QPQSFSVGQPQ True H1975_Epitope_Rep3 1201.5727507576098 1201.57111490379 18.321 3 -0.8712452154747151 0.268658810325477 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 27067 4546 FLFPSLLQVF True NCI_RA007_Epitope_Rep2 1209.6797820254499 1209.6781349037901 22.311 3 -0.8712983817319652 0.26867179170641375 1.0 ['ENST00000538029.1_1_12:9102760-9162130:+|nuORF'] 63828 14850 LNKEVLELA True PC9_epitope_Rep4 1027.5913609438699 1027.59026993586 65.059 2 -0.8713118492118682 0.26867179170641375 1.0 ['ELMO1|p.Q633L|1|0.23|ENSG00000155849|chr7:36870400-36870400|T/A|missense_variant'] 100766 11480 SLEDLLLKGSF True NCI_RA007_Epitope_Rep1 1220.66525416012 1220.66414993586 48.619 2 -0.8713164197253119 0.26867179170641375 1.0 ['nc|ENSG00000187288|Q96AQ7-3|CIDEC'] 67187 11429 LSRCLNTFDL True PC9_epitope_Rep1 1180.59104367404 1180.58938490379 48.84 3 -0.8713302114657896 0.26867179170641375 1.0 ['ENSG00000139514|ENST00000380752|SLC7A1'] 44502 20541 ILLLFWIIFY True PC9_epitope_Rep4 1339.79441785487 1339.7933299358601 87.161 2 -0.8713683455731134 0.26867828185057374 1.0 ['ENST00000374024.3_1_1:27721873-27722296:+|nuORF'] 60034 7502 LGKRKPGK True NCI_RA007_Epitope_Rep4 882.5763200164198 882.57522993586 35.501 2 -0.8713787696372449 0.26867828185057374 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1'] 25100 2829 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 15.857 2 -0.8713980333819751 0.2686810026792352 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 41990 8558 IDEYHAATQP True H1975_Epitope_Rep2 1143.5196525555898 1143.5185499358602 37.875 2 -0.8714055280888569 0.2686810026792352 1.0 ['ENSG00000037042|ENST00000251412|TUBG2'] 23248 7918 EVNRLTEST True PC9_epitope_Rep4 1047.51965255559 1047.5185499358602 37.887 2 -0.8714060714935822 0.2686810026792352 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 113130 14063 TLPFPGAVRR True PC9_epitope_Rep2 1112.6454622053998 1112.6443699358601 59.37 2 -0.871434628772242 0.2686912610464301 1.0 ['ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 98896 23453 SGWVKRGPTG True H1975_Epitope_Rep1 1043.55122746739 1043.55012993586 97.462 2 -0.8715108047601504 0.2686939811762726 1.0 ['nc|ENSG00000161513|P22570-4|FDXR', 'nc|ENSG00000161513|P22570-6|FDXR', 'nc|ENSG00000161513|P22570-5|FDXR', 'ENST00000577509.5_1_17:72858941-72868963:-|nuORF', 'nc|ENSG00000161513|P22570|FDXR', 'ENSG00000161513|ENST00000293195|FDXR', 'nc|ENSG00000161513|P22570-2|FDXR', 'nc|ENSG00000161513|P22570-7|FDXR', 'nc|ENSG00000161513|P22570-3|FDXR', 'ENST00000579482.5_1_17:72858941-72860228:-|nuORF'] 61325 18748 LIRHGEHF True PC9_epitope_Rep3 1007.5300980999899 1007.52900993586 77.335 2 -0.871538248456784 0.2686939811762726 1.0 ['ENST00000361972.8_1_10:7423786-7423873:-|nuORF'] 25084 18541 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 76.906 2 -0.8715493379407633 0.2686939811762726 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 43601 14125 IGTSFILSGF True PC9_epitope_Rep5 1040.5542471591598 1040.5531499358601 59.342 2 -0.8715907473024787 0.2687042387858726 1.0 ['FZD10|p.A560Sfs*13|1|0.26|ENSG00000111432|chr12:130164613-130164614|-/A|frameshift_variant', 'ENSG00000111432|ENST00000229030|FZD10', 'FZD10|p.D435Afs*24|1|0.13|ENSG00000111432|chr12:130164246-130164246|A/-|frameshift_variant', 'FZD10|p.V418L|1|0.22|ENSG00000111432|chr12:130164194-130164194|G/T|missense_variant'] 14604 15479 DTYQKRLRFYW True NCI_RA007_Epitope_Rep2 1574.7993966474999 1574.79828993586 64.914 2 -0.8716656161088299 0.26872475314183125 1.0 ['ENSG00000117215|ENST00000375105|PLA2G2D'] 94620 14027 RRTVPKPRVK True PC9_epitope_Rep2 1235.7938577745897 1235.79220490379 59.234 3 -0.8716734932292264 0.26872475314183125 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000173575|O14647-3|CHD2', 'CHD2|p.C440*|1|0.35|ENSG00000173575|chr15:92946155-92946159|ATTGC/-|frameshift_variant'] 45515 16542 IQNWAQPLL True PC9_epitope_Rep1 1081.5920296502097 1081.59092993586 68.453 2 -0.8716818009397954 0.2687452663468821 1.0 ['ENST00000569289.5_1_16:68059372-68071937:+|nuORF'] 18224 12872 EINKALTKDP True PC9_epitope_Rep1 1127.6186383208699 1127.61754993586 54.386 2 -0.8717238130124865 0.2687452663468821 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 81078 15446 PISLTHTGIH True PC9_epitope_Rep4 1074.5821932425 1074.58108993586 67.346 2 -0.8717543576715394 0.26876577840112204 1.0 ['ENST00000442218.2_1_12:48174732-48175212:+|nuORF'] 15847 6681 EDFEQKYNFRF True NCI_RA007_Epitope_Rep3 1521.6888431390096 1521.68719490379 33.362 3 -0.8717589328005141 0.26876577840112204 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 134086 9183 VYKRLHKP True NCI_RA007_Epitope_Rep5 1039.6290838652696 1039.6279899358601 41.973 2 -0.8717701929489695 0.2687760339967181 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 45998 14106 ISFQHMQL True PC9_epitope_Rep5 1002.49568673722 1002.49458993586 59.269 2 -0.871787376983691 0.2687862893046478 1.0 ['CCDC73|p.Q289L|1|0.1|ENSG00000186714|chr11:32653196-32653196|T/A|missense_variant'] 126614 15975 VLMKFMEML True PC9_epitope_Rep1 1140.5745313048799 1140.57342993586 66.256 2 -0.8718066399122115 0.2687927745989005 1.0 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 53560 13790 KRQLLLQPKL True PC9_epitope_Rep3 1235.8077765032297 1235.80612490379 58.12 3 -0.8718221884280288 0.2687927745989005 1.0 ['ENST00000489944.1_1_1:151106967-151107344:-|nuORF'] 4337 9733 AIIYVIKKN True PC9_epitope_Rep6 1060.6644663144798 1060.6633699358601 47.85 2 -0.8719312490229006 0.26882730765994445 1.0 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 22745 11081 ETTRPVPAP True NCI_RA007_Epitope_Rep5 966.5134449763398 966.51234993586 49.257 2 -0.8719332264538276 0.26882730765994445 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 27684 21652 FPISSSPKAF True PC9_epitope_Rep5 1079.56514619603 1079.56404993586 88.329 2 -0.8720495988124347 0.26890768087284556 1.0 ['nc|ENSG00000198585|Q96DE0-2|NUDT16', 'nc|ENSG00000198585|Q96DE0-4|NUDT16'] 59310 16484 LFHSSSDVLP True PC9_epitope_Rep3 1100.55022440788 1100.54912993586 68.542 2 -0.8720791110748157 0.2689319571436585 1.0 ['ENST00000517565.1_1_7:143510556-143510709:-|nuORF'] 61877 23709 LLCWLLMKIIK True NCI_RA007_Epitope_Rep3 1372.8338572220398 1372.83327496793 102.79 1 -0.8721715364827635 0.26901232663478664 1.0 ['ENST00000539921.5_1_11:62619473-62619665:-|nuORF'] 70405 21915 LVTKKKRFWCW True NCI_RA007_Epitope_Rep1 1493.8329457052498 1493.83129490379 89.733 3 -0.872195973502048 0.26904471459218443 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF', 'ENST00000473990.1_1_7:24784179-24789393:-|nuORF', 'ENSG00000105928|ENST00000645220|GSDME'] 90504 4411 RELGSLEAFE True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56494490379 23.324 3 -0.872198181800901 0.26904471459218443 1.0 ['SMC3|p.P950_Q951del|1|0.13|ENSG00000108055|chr10:110601840-110601845|CCCCAG/-|inframe_deletion'] 14862 6076 DVYKNWWYWYC True H1975_Epitope_Rep1 1624.6809213075999 1624.6792649037902 28.438 3 -0.8722499485839246 0.26904471459218443 1.0 ['ENST00000359165.5_1_12:19609713-19609968:-|nuORF'] 141559 19630 YTNPIAKPI True PC9_epitope_Rep4 1015.57023157647 1015.56912993586 83.623 2 -0.8722751885739788 0.26904471459218443 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 125179 16524 VIHRLQLI True PC9_epitope_Rep2 990.6338348925399 990.63272993586 68.799 2 -0.8722825000181781 0.26904471459218443 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-3|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN'] 38197 7450 HDTTAAAI True PC9_epitope_Rep6 798.3871818340599 798.38608993586 37.89 2 -0.8722932962707939 0.26904471459218443 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000502665.1_1_4:187126176-187131792:+|nuORF'] 113073 6542 TLNQPPPLLRP True NCI_RA007_Epitope_Rep5 1244.7241064489199 1244.72245490379 31.827 3 -0.8722977165443714 0.26904471459218443 1.0 ['ENST00000526255.1_1_1:211485798-211487107:+|nuORF', 'nc|ENSG00000117625|Q9P2K3|RCOR3', 'ENSG00000117625|ENST00000419091|RCOR3'] 25085 19650 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 81.383 2 -0.872310022355868 0.26904471459218443 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 23671 14644 EYDAVAEKAGK True H1975_Epitope_Rep1 1179.57716743171 1179.57606993586 61.54 2 -0.8723179161313589 0.26904471459218443 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 14938 19980 DYENRLREMNR True H1975_Epitope_Rep3 1494.6997592592197 1494.6986699358602 83.614 2 -0.8723213139996091 0.26904471459218443 1.0 ['KIF21B|p.K712N|1|0.11|ENSG00000116852|chr1:200996337-200996337|C/A|missense_variant'] 122498 11893 VGEKRKLII True NCI_RA007_Epitope_Rep4 1054.6862643882198 1054.6851699358601 52.744 2 -0.8724200675990491 0.2690474187487732 1.0 ['ENST00000479939.1_1_7:30062251-30066124:-|nuORF', 'ENSG00000106080|ENST00000222803|FKBP14'] 137653 11834 YEIHPTKSF True NCI_RA007_Epitope_Rep4 1120.55530978832 1120.5542099358602 52.5 2 -0.8724427176498787 0.2690474187487732 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 116139 17801 TSSTSLFF True PC9_epitope_Rep6 888.42289863644 888.42180993586 81.105 2 -0.8724779847122515 0.2690474187487732 1.0 ['ENST00000233813.4_1_2:217538912-217539035:-|nuORF'] 130712 21843 VSVKNNLTTK True PC9_epitope_Rep6 1102.63462273818 1102.63352993586 96.921 2 -0.872575796549779 0.26908570867742526 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.M2050Ifs*24|1|0.12|ENSG00000163092|chr2:167248067-167248067|G/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 68833 6694 LTLTWLYFWWE True H1975_Epitope_Rep2 1556.770387935 1556.76817987172 30.658 4 -0.8726758632324456 0.2691164512239576 1.0 ['ENST00000528031.1_1_11:75167699-75188792:-|nuORF', 'ENSG00000158555|ENST00000336898|GDPD5', 'ARRB1-GDPD5|1|fusion'] 142058 3946 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 19.93 3 -0.8726939029690252 0.2691164512239576 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 42414 9574 IEDLLEASMP True H1975_Epitope_Rep3 1116.53727676568 1116.53616993586 41.836 2 -0.8726962099404226 0.2691164512239576 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 25086 20278 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 83.909 2 -0.8727392135179306 0.2691434179167251 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 110796 19429 TGIWQSIDV True PC9_epitope_Rep4 1017.5131106231698 1017.51200993586 82.846 2 -0.8727613385324808 0.2691434179167251 1.0 ['ENSG00000138379|ENST00000260950|MSTN'] 66296 10930 LSFPGGSLL True H1975_Epitope_Rep2 889.49091862661 889.48982993586 47.075 2 -0.8727773788991671 0.2691434179167251 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 40011 9471 HPQPQGLEV True PC9_epitope_Rep5 1003.5086939490699 1003.50758993586 41.387 2 -0.8727865549076999 0.2691434179167251 1.0 ['ENSG00000187720|ENST00000261862|THSD4', 'nc|ENSG00000187720|Q6ZMP0-2|THSD4'] 114407 12878 TPTLVEVS True PC9_epitope_Rep6 844.45419876472 844.45310993586 61.057 2 -0.8728089074465079 0.2691536639048941 1.0 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 85162 17062 QENIIWSNLQY True H1975_Epitope_Rep2 1406.6830294825802 1406.6819299358601 70.89 2 -0.8728370092739203 0.269160136262319 1.0 ['ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3', 'ENST00000498500.1_1_1:155165634-155166210:-|nuORF'] 18579 8575 EKQIWVEKYY True H1975_Epitope_Rep1 1384.7027022979998 1384.70160993586 37.91 2 -0.8728501613638227 0.269160136262319 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 25089 20534 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 84.945 2 -0.8729152396635745 0.26918062662087333 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 48912 6990 KEDQTEYLEER True H1975_Epitope_Rep1 1438.65760258038 1438.6565099358602 31.924 2 -0.8729799162535314 0.26918062662087333 1.0 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 55974 5277 LASAEKLMYFC True PC9_epitope_Rep3 1274.60391685686 1274.60227490379 25.378 3 -0.8729992786101953 0.2692189077043849 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 16818 9339 EEWERKQRELQ True NCI_RA007_Epitope_Rep2 1529.7586540343298 1529.7575499358602 40.935 2 -0.8731249905174053 0.2692383168400101 1.0 ['nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2'] 86529 16040 QLAVQNLQKV True PC9_epitope_Rep5 1139.6662572196299 1139.6651699358601 66.686 2 -0.8731252793399347 0.2692383168400101 1.0 ['nc|ENSG00000197847|A6NK97|SLC22A20P'] 110263 17035 TERLRHLVGP True H1975_Epitope_Rep2 1176.6727395824 1176.6716499358602 70.781 2 -0.8731435215995491 0.2692383168400101 1.0 ['ENST00000419814.1_1_1:108963859-108964111:+|nuORF'] 93924 15957 RRGIIPTE True NCI_RA007_Epitope_Rep5 940.54541381096 940.54430993586 68.104 2 -0.8731709243623119 0.2692383168400101 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'ENST00000443361.1_1_9:108287470-108288637:+|nuORF'] 47177 7935 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep1 1208.4954293164699 1208.4943299358602 35.471 2 -0.8732352060379294 0.2692383168400101 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 59064 9074 LEWDHIEMNFR True PC9_epitope_Rep2 1488.6819839367597 1488.68032490379 40.247 3 -0.8732509553843203 0.2692383168400101 1.0 ['ENSG00000153012|ENST00000382114|LGI2', 'LGI2|p.V395Gfs*9|1|0.37|ENSG00000153012|chr4:25003907-25003908|-/T|frameshift_variant'] 101955 10419 SLQEIEKLEHK True NCI_RA007_Epitope_Rep2 1352.729979675 1352.72888993586 45.12 2 -0.8733345902652438 0.26930085220901545 1.0 ['ENST00000525040.5_1_11:9801967-9809483:-|nuORF'] 109424 21195 TDFFLLAVM True PC9_epitope_Rep6 1055.53615456687 1055.5350499358601 94.374 2 -0.8733602730899651 0.26930085220901545 1.0 ['ENSG00000181499|ENST00000321252|OR6T1'] 25113 23189 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 100.72 2 -0.8734790167545267 0.2693229436744075 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 84441 13519 QAEVNCGL True H1975_Epitope_Rep2 832.3749028981999 832.37435496793 57.136 1 -0.8735148722736404 0.2693229436744075 1.0 ['nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 39714 5394 HLTSKTPP True PC9_epitope_Rep1 879.48141657207 879.48030993586 25.582 2 -0.8735298671906827 0.2693229436744075 1.0 ['nc|ENSG00000213999|Q02080|MEF2B', 'ENSG00000213999|ENST00000424583|MEF2B'] 121576 12220 VFEHDAWFIF True NCI_RA007_Epitope_Rep4 1309.6131590176099 1309.61206993586 53.998 2 -0.873540715053351 0.2693229436744075 1.0 ['nc|ENSG00000112759|Q99808-2|SLC29A1', 'ENSG00000112759|ENST00000371755|SLC29A1'] 100741 6961 SLDWRRRRKS True NCI_RA007_Epitope_Rep2 1358.7643485514598 1358.7632499358601 31.698 2 -0.8735422831277982 0.2693229436744075 1.0 ['ENST00000586602.5_1_19:9679707-9694912:-|nuORF', 'ENST00000320451.6_1_19:9679704-9695196:-|nuORF'] 80155 18083 PFSGKSFYL True PC9_epitope_Rep3 1044.5280324113198 1044.5269299358602 74.754 2 -0.873558696692983 0.2693229436744075 1.0 ['ENSG00000161692|ENST00000315005|DBF4B', 'ENST00000526915.5_1_17:42786185-42811460:+|nuORF', 'nc|ENSG00000161692|Q8NFT6-4|DBF4B', 'ENST00000528766.5_1_17:42786185-42808425:+|nuORF', 'nc|ENSG00000161692|Q8NFT6-2|DBF4B'] 136724 5904 WYFGAYSIVA True PC9_epitope_Rep2 1175.56514619603 1175.56404993586 28.105 2 -0.8735812009644272 0.2693229436744075 1.0 ['ENSG00000051523|ENST00000261623|CYBA', 'ENST00000562209.1_1_16:88713507-88717421:-|nuORF', 'ENST00000566534.5_1_16:88713161-88717421:-|nuORF'] 44350 3897 ILDWDYYIER True NCI_RA007_Epitope_Rep2 1384.66631678928 1384.6646849037902 19.793 3 -0.8736420859899878 0.2693229436744075 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 20150 7913 ENDVCIPAP True H1975_Epitope_Rep2 956.4273323938799 956.42622993586 35.385 2 -0.8736478244075787 0.2693229436744075 1.0 ['ENST00000524666.5_1_11:65113686-65113899:+|nuORF'] 133305 25471 VVTVGVITVL True PC9_epitope_Rep2 998.6375828603 998.63648993586 103.65 2 -0.8737104498883712 0.2693423394386132 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 132432 23888 VVAVAGTIIL True NCI_RA007_Epitope_Rep4 954.61136811246 954.61026993586 103.62 2 -0.873716298515719 0.2693423394386132 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 119809 10403 VDAGTNRAECL True PC9_epitope_Rep1 1147.52917169347 1147.52806993586 44.9 2 -0.8737383050336109 0.2693423394386132 1.0 ['nc|ENSG00000116962|P14543-2|NID1', 'ENSG00000116962|ENST00000264187|NID1'] 20171 10110 ENFLHNAI True PC9_epitope_Rep4 956.4715801643599 956.47048993586 46.559 2 -0.8737594693306368 0.2693423394386132 1.0 ['INSRR|p.L1074Cfs*19|1|0.18|ENSG00000027644|chr1:156842414-156842414|A/-|frameshift_variant', 'ENSG00000027644|ENST00000368195|INSRR', 'INSRR|p.G755Afs*20|1|0.21|ENSG00000027644|chr1:156845249-156845249|C/-|frameshift_variant', 'INSRR|p.A747Qfs*28|1|0.15|ENSG00000027644|chr1:156845274-156845274|C/-|frameshift_variant'] 25095 23665 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 99.257 2 -0.8737733715452423 0.2693423394386132 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 59444 13351 LFPEVRFPAPR True NCI_RA007_Epitope_Rep2 1327.7400908662298 1327.7389899358602 56.57 2 -0.8737764326188866 0.2693423394386132 1.0 ['ENST00000542575.6_2_19:47291354-47291816:-|nuORF'] 94446 20844 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 86.308 2 -0.8737869572263001 0.26935149375035033 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 25091 21749 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 90.121 2 -0.873794690754167 0.26935149375035033 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 20478 15398 EPIVYYWQRIR True NCI_RA007_Epitope_Rep2 1521.80923305521 1521.80812993586 64.595 2 -0.8737967666518079 0.26935149375035033 1.0 ['ENSG00000166250|ENST00000448775|CLMP', 'ENST00000527977.5_1_11:122953793-122955421:-|nuORF'] 142209 10094 YVYTCMYTH True PC9_epitope_Rep1 1179.47290268731 1179.4712549037902 43.698 3 -0.8738044275780257 0.26935149375035033 1.0 ['ENST00000407010.6_2_7:16128723-16129239:-|nuORF'] 986 7902 ADYYMASP True PC9_epitope_Rep2 916.3636695081599 916.36256993586 35.761 2 -0.8738320753054547 0.26935149375035033 1.0 ['ENSG00000009413|ENST00000368802|REV3L'] 88928 20825 QVFPMNPPKF True H1975_Epitope_Rep3 1203.6110508426298 1203.6099499358602 86.993 2 -0.8739266273082525 0.26938598212033743 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 137090 7107 YAQLPPAP True PC9_epitope_Rep1 855.4490538146299 855.44794993586 32.146 2 -0.8739391520309442 0.26938598212033743 1.0 ['ENSG00000112238|ENST00000369215|PRDM13'] 102781 4371 SNNDDDED True H1975_Epitope_Rep1 922.27881315354 922.27770993586 21.813 2 -0.8739731710155348 0.26939621954124454 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 94439 20143 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 83.471 2 -0.8739902462948494 0.2694026818366518 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 25400 11346 FEDENFHY True H1975_Epitope_Rep2 1099.42468954159 1099.42358993586 48.691 2 -0.8739960268568713 0.2694026818366518 1.0 ['ENSG00000171497|ENST00000307720|PPID'] 36171 6523 GVATYAAAV True PC9_epitope_Rep4 821.4283183700499 821.4272299358599 32.213 2 -0.8740699044981708 0.2694409415720891 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'CTNNB1|p.E649Q|1|0.27|ENSG00000168036|chr3:41236490-41236490|G/C|missense_variant'] 46123 2545 ISIVYRYP True PC9_epitope_Rep6 1009.5596668927699 1009.55856993586 14.717 2 -0.874087394373256 0.269457638042397 1.0 ['nc|ENSG830|Q9HDB8|ERVK-5_env'] 142046 11572 YVLQDWQQYFW True NCI_RA007_Epitope_Rep2 1574.7194149912998 1574.7183099358601 49.602 2 -0.8740933946873887 0.269457638042397 1.0 ['RAB3GAP1|p.E741Ifs*5|1|0.06|ENSG00000115839|chr2:135153807-135153808|-/ATTA|frameshift_variant', 'nc|ENSG00000115839|Q15042-4|RAB3GAP1', 'ENSG00000115839|ENST00000264158|RAB3GAP1', 'nc|ENSG00000115839|Q15042-3|RAB3GAP1'] 56661 12902 LDIYWTVHRAR True H1975_Epitope_Rep3 1428.76261721596 1428.7615299358602 54.854 2 -0.8741075330679112 0.269457638042397 1.0 ['nc|ENSG00000146013|O60609-2|GFRA3', 'ENSG00000146013|ENST00000274721|GFRA3'] 121552 14863 VFDIKAVSI True PC9_epitope_Rep4 990.57498260374 990.57388993586 65.108 2 -0.8741302421984904 0.26946409807355515 1.0 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 83547 10946 PTVSGVTHLV True PC9_epitope_Rep3 1008.56039516876 1008.55928993586 47.085 2 -0.8741376482707166 0.26946409807355515 1.0 ['ENST00000531733.1_1_8:11666026-11667401:+|nuORF'] 94286 15534 RRRGWREQRHR True H1975_Epitope_Rep1 1591.8780899474298 1591.8769899358601 65.026 2 -0.8741771527017833 0.26946678248199724 1.0 ['ENST00000568956.1_1_19:56116859-56125214:+|nuORF'] 29976 26054 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 107.79 3 -0.8742105419100883 0.26946678248199724 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 26612 9939 FILFQLCWEWK True NCI_RA007_Epitope_Rep2 1511.76352873275 1511.7624299358602 43.287 2 -0.8742163820758109 0.26946678248199724 1.0 ['ENST00000444553.5_1_13:19636745-19636844:-|nuORF'] 76061 22924 NMDYWKIL True PC9_epitope_Rep5 1081.52665251233 1081.52554993586 93.168 2 -0.8742540107192807 0.26947701704983257 1.0 ['FZD10|p.A560Sfs*13|1|0.26|ENSG00000111432|chr12:130164613-130164614|-/A|frameshift_variant', 'ENSG00000111432|ENST00000229030|FZD10'] 125482 21320 VIWVLWIL True PC9_epitope_Rep5 1040.6422743179198 1040.64116993586 87.062 2 -0.8742828729437544 0.26949639279960774 1.0 ['ENST00000274979.12_2_2:242163924-242164206:+|nuORF'] 19608 9118 ELQQITWQTF True H1975_Epitope_Rep3 1292.6401020414398 1292.63900993586 40.061 2 -0.8743102928761167 0.26949639279960774 1.0 ['nc|ENSG00000069667|P35398-4|RORA', 'ENSG00000069667|ENST00000335670|RORA', 'nc|ENSG00000069667|P35398-3|RORA', 'nc|ENSG00000069667|P35398-1|RORA'] 62812 21133 LLLVRWKFQQE True NCI_RA007_Epitope_Rep1 1458.83471952706 1458.83362993586 86.472 2 -0.8743347640930506 0.26949639279960774 1.0 ['ENST00000360409.7_1_2:206547732-206547855:+|nuORF'] 19353 18285 ELLKMRRCA True NCI_RA007_Epitope_Rep5 1118.60525426954 1118.60414993586 77.133 2 -0.8743551991334383 0.26949639279960774 1.0 ['ENST00000433078.5_1_7:86848977-86849826:-|nuORF'] 36739 9267 GVKGAKIK True PC9_epitope_Rep3 799.5279728416699 799.52686993586 40.589 2 -0.8743736204574352 0.26949639279960774 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 24982 14133 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 59.692 2 -0.87437511809247 0.26949639279960774 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 39986 13689 HPLSSARHSP True PC9_epitope_Rep6 1087.55229009655 1087.55118993586 64.44 2 -0.8744049157650515 0.26950662594906566 1.0 ['ENST00000178640.9_1_15:67835333-67835654:+|nuORF'] 55285 8455 LADSSPRWLW True H1975_Epitope_Rep1 1229.61930702721 1229.61820993586 37.451 2 -0.8744320477591933 0.2695448751173183 1.0 ['ENSG00000165757|ENST00000375377|JCAD'] 109459 9421 TDLEWQEPA True H1975_Epitope_Rep2 1087.48220441771 1087.48110993586 41.206 2 -0.8744782272263835 0.26956046726615684 1.0 ['ENST00000484975.5_1_20:44472013-44472349:-|nuORF'] 25092 22628 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 94.161 2 -0.874481124758416 0.26956046726615684 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 133382 23384 VVVGVGLIVG True PC9_epitope_Rep6 910.5851533646199 910.58404993586 103.05 2 -0.8744877469889071 0.26956046726615684 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 45185 14116 IPQREKTV True PC9_epitope_Rep3 969.5607295219299 969.55962993586 59.382 2 -0.8744907034143061 0.26956046726615684 1.0 ['ENST00000475200.5_1_10:103113883-103221786:+|nuORF'] 78878 14067 PAGAIAPLG True PC9_epitope_Rep3 765.43848913093 765.43738993586 59.196 2 -0.8745089700739516 0.26956046726615684 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 99796 13456 SIKFTGRVEF True PC9_epitope_Rep5 1182.6397081186199 1182.63805490379 56.774 3 -0.8745580922686934 0.26956046726615684 1.0 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 20184 14246 ENGTLLFHL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 66.688 2 -0.8745619144936757 0.26956046726615684 1.0 ['ASTN1|p.I122L|1|0.25|ENSG00000152092|chr1:177061185-177061185|T/G|missense_variant'] 70080 7681 LVNQPPHS True PC9_epitope_Rep5 890.4610154806601 890.45990993586 34.49 2 -0.8745698906200838 0.2695669225166676 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 106707 15222 STVAETMLSY True H1975_Epitope_Rep2 1100.5059766374 1100.5048699358601 63.709 2 -0.874608188859838 0.2695669225166676 1.0 ['ADGRG4|p.S601Y|1|0.2|ENSG00000156920|chrX:136345508-136345508|C/A|missense_variant'] 30636 7665 GAKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 38.804 3 -0.8746481206765261 0.2695722808884905 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 81441 12772 PLFFHTHHCLP True H1975_Epitope_Rep1 1347.65464699011 1347.6535499358602 54.188 2 -0.8746685794784597 0.2695722808884905 1.0 ['ENST00000267116.7_1_12:56636474-56636675:-|nuORF'] 36764 6695 GVKMSELP True H1975_Epitope_Rep3 859.4473395624699 859.44624993586 30.708 2 -0.8746789970514519 0.2695722808884905 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1'] 101472 21791 SLLASSEWPE True PC9_epitope_Rep4 1117.52915461013 1117.52804993586 92.013 2 -0.8747043837034084 0.2695722808884905 1.0 ['ENSG00000102699|ENST00000381989|PARP4'] 118874 15104 VAAYSASLEDV True NCI_RA007_Epitope_Rep4 1123.5397192938299 1123.5386299358602 65.661 2 -0.8747143128756312 0.2695722808884905 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2'] 97675 12180 SEHNRLYWYRQ True H1975_Epitope_Rep1 1550.7378590201 1550.7367699358601 51.869 2 -0.8747402461545242 0.2695722808884905 1.0 ['nc|ENSG00000278030|P04435|TRBV7-9'] 72708 17742 MMRIRLLY True PC9_epitope_Rep5 1094.60927702082 1094.6081699358601 73.263 2 -0.8747592574781421 0.2695787350848692 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000494917.6_1_9:100069637-100105846:+|nuORF', 'ENST00000460482.6_1_9:100070037-100107975:+|nuORF', 'ENST00000529787.2_1_9:100053158-100088872:+|nuORF'] 101595 12865 SLLPHQDSVP True PC9_epitope_Rep6 1091.5611234447501 1091.56002993586 61.003 2 -0.8747668163993186 0.2695787350848692 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1'] 112326 11731 TLAAQLQETFV True NCI_RA007_Epitope_Rep2 1219.6448530687098 1219.6437499358601 50.228 2 -0.8748065714772262 0.2696029689797633 1.0 ['RBM19|p.G608V|1|0.18|ENSG00000122965|chr12:113940075-113940075|C/A|missense_variant'] 25345 18126 FDWNWRDQKLR True H1975_Epitope_Rep1 1562.7742445288197 1562.7731499358601 75.519 2 -0.8749147480779508 0.26965521104669077 1.0 ['ENSG00000184220|ENST00000421999|CMSS1', 'nc|ENSG00000184220|Q9BQ75-2|CMSS1', 'ENST00000494412.1_1_3:99895157-99897229:+|nuORF'] 56926 20849 LDQHQGSQETL True PC9_epitope_Rep5 1254.5840437173 1254.5829499358601 85.245 2 -0.8749381770255954 0.26968967062514004 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S'] 25094 23191 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 96.875 2 -0.874942258888993 0.26968967062514004 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 42744 8396 IELLHNIDP True H1975_Epitope_Rep1 1062.5709598524602 1062.5698699358602 37.223 2 -0.8749951708377279 0.2697343546512442 1.0 ['nc|ENSG00000113273|P15848-2|ARSB', 'ENSG00000113273|ENST00000264914|ARSB'] 89935 14136 RCWWRWPRCYW True H1975_Epitope_Rep1 1696.7656115047598 1696.7645099358601 59.546 2 -0.875001886217822 0.2697343546512442 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 101834 7565 SLPGWKVEC True PC9_epitope_Rep6 1017.4953523840499 1017.49424993586 38.373 2 -0.8750046260487533 0.2697343546512442 1.0 ['ENSG00000124253|ENST00000319441|PCK1'] 100881 11227 SLESQVQEAHL True PC9_epitope_Rep1 1239.6095301891498 1239.60787490379 48.064 3 -0.8750341144190056 0.26974458074273233 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000494917.6_1_9:100069637-100105846:+|nuORF', 'ENST00000460482.6_1_9:100070037-100107975:+|nuORF', 'ENST00000529787.2_1_9:100086199-100092633:+|nuORF'] 103488 3894 SPQQAEVSPDA True H1975_Epitope_Rep3 1127.50948179471 1127.5083899358601 20.099 2 -0.87506042541148 0.26976880960049293 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 132546 12778 VVDTPELL True H1975_Epitope_Rep2 884.4854988929999 884.48440993586 54.254 2 -0.8750778130990335 0.2697752572988868 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 22872 19653 EVDEYRRHWWR True NCI_RA007_Epitope_Rep1 1630.7753071579798 1630.7742099358602 80.636 2 -0.8750859893132739 0.2697752572988868 1.0 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN'] 25128 13010 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 57.143 2 -0.8752738592348429 0.2699357295881933 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25114 25742 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 111.34 2 -0.8752834546567851 0.2699357295881933 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 24072 13222 EYNTMGKVVF True PC9_epitope_Rep5 1186.5692456002998 1186.56760490379 55.866 3 -0.8753113720569038 0.2699459520008961 1.0 ['ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A', 'ENST00000510024.5_1_5:115822443-115824680:-|nuORF'] 32370 5797 GFIYTTYRFPK True H1975_Epitope_Rep1 1391.7237720957498 1391.7221249037902 27.37 3 -0.8753976917687455 0.26997017600358447 1.0 ['ENST00000330825.3_1_13:45963855-45964907:+|nuORF'] 26079 14893 FGLPPKRLWR True NCI_RA007_Epitope_Rep3 1268.75059598028 1268.74948993586 66.01 2 -0.8754610655737283 0.27000840100812096 1.0 ['ENST00000261783.3_1_14:68086627-68108954:+|nuORF'] 14602 5214 DTYQEFEETYI True H1975_Epitope_Rep2 1436.5983563687598 1436.5967249037901 25.123 3 -0.8755131243829591 0.2700288426535241 1.0 ['ENSG00000136488|ENST00000316193|CSH1', 'nc|ENSG00000213218|P0DML3-2|CSH2', 'ENSG00000213218|ENST00000392886|CSH2'] 24986 15863 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 66.465 2 -0.8755259145060292 0.2700288426535241 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 126693 11643 VLPEFPPAEAQ True NCI_RA007_Epitope_Rep2 1196.607739284 1196.60664993586 49.882 2 -0.8755592891775427 0.27004550227511376 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-4|MAGI1', 'nc|ENSG00000151276|Q96QZ7-3|MAGI1', 'nc|ENSG00000151276|Q96QZ7-5|MAGI1'] 12673 6371 DLDPVSEDP True H1975_Epitope_Rep2 985.42402083525 985.42347496793 29.433 1 -0.8755699899902617 0.27004550227511376 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 14201 7783 DSEFRYTL True NCI_RA007_Epitope_Rep3 1029.47672511445 1029.47562993586 37.737 2 -0.8755822937733142 0.27004550227511376 1.0 ['PTAFR|p.I271Lfs*18|1|0.36|ENSG00000169403|chr1:28150212-28150212|G/-|frameshift_variant', 'ENSG00000169403|ENST00000373857|PTAFR'] 25096 23985 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 100.67 2 -0.875587065088529 0.2700557220059922 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 69006 11332 LTPSPTDSPR True H1975_Epitope_Rep1 1069.54038800017 1069.53987496793 48.567 1 -0.8756020371384003 0.2700890357262851 1.0 ['ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000163508|O95936-3|EOMES', 'nc|ENSG00000163508|O95936-2|EOMES', 'EOMES|p.R469W|1|0.13|ENSG00000163508|chr3:27717726-27717726|G/A|missense_variant'] 80622 6673 PGRTSDSPW True PC9_epitope_Rep2 1001.4566583762099 1001.45556993586 31.073 2 -0.8756038881789918 0.2700890357262851 1.0 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5', 'ENST00000522327.1_1_8:103372297-103373424:-|nuORF'] 3787 19238 AGTLTVGDLV True PC9_epitope_Rep4 944.5178616504398 944.51731496793 82.099 1 -0.8756218787518396 0.2700890357262851 1.0 ['ABCB7|p.V655Sfs*30|1|0.1|ENSG00000131269|chrX:75060303-75060303|C/-|frameshift_variant', 'nc|ENSG00000131269|O75027-3|ABCB7', 'ENSG00000131269|ENST00000373394|ABCB7', 'nc|ENSG00000131269|O75027-2|ABCB7', 'ENST00000469368.1_1_X:74289115-74291374:-|nuORF'] 25115 26125 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 113.37 2 -0.8756283707529797 0.2700890357262851 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 12331 11056 DIQPSPRRAR True H1975_Epitope_Rep1 1194.6581521474197 1194.6570499358602 47.488 2 -0.8756331539892417 0.2700890357262851 1.0 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-3|HPS1'] 25130 13560 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 59.366 2 -0.8756515678465868 0.2700890357262851 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 246 19480 AAGAPNLVLAA True PC9_epitope_Rep5 966.5498304850599 966.54872993586 79.983 2 -0.8756785646312791 0.27009925384626154 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 81295 14327 PLADITQDF True H1975_Epitope_Rep2 1018.4971262058599 1018.49602993586 60.259 2 -0.8757346100001459 0.27011590794557366 1.0 ['CLTC-VMP1|20|fusion'] 119702 11791 VAVRYKVP True H1975_Epitope_Rep2 930.5650866263798 930.56398993586 50.428 2 -0.8757380513226938 0.27011590794557366 1.0 ['TG|p.S1591Y|1|0.14|ENSG00000042832|chr8:132929148-132929148|C/A|missense_variant'] 64911 15440 LQEDVKKAELH True PC9_epitope_Rep6 1308.70376492716 1308.70266993586 71.543 2 -0.8757501662711425 0.27011590794557366 1.0 ['ENSG00000152240|ENST00000282058|HAUS1', 'nc|ENSG00000152240|Q96CS2-2|HAUS1'] 120864 13339 VEMEDWEGNLR True H1975_Epitope_Rep2 1376.6030649097197 1376.60140490379 56.44 3 -0.8757709120354543 0.27012612511723616 1.0 ['ENSG00000171819|ENST00000376819|ANGPTL7'] 63470 18601 LLWGEEILLTV True PC9_epitope_Rep1 1284.73293979712 1284.73184993586 76.337 2 -0.8758155418758845 0.27015034015509953 1.0 ['ENST00000531162.5_1_14:95600723-95607049:-|nuORF'] 24988 16427 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 68.668 2 -0.8759002249296332 0.2702127659574468 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 66547 19415 LSICCWASP True PC9_epitope_Rep2 978.4303095993399 978.42920993586 80.058 2 -0.8759184302640595 0.2702127659574468 1.0 ['ENST00000324379.9_1_1:40219137-40219350:+|nuORF'] 104142 12446 SQEPKYQL True NCI_RA007_Epitope_Rep5 991.4974605590301 991.49691496793 54.531 1 -0.8759848123514418 0.2702789714589661 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 117264 16871 TVLWAIGRVP True PC9_epitope_Rep1 1110.6549642599398 1110.65386993586 69.719 2 -0.8760183201457065 0.27028540234872556 1.0 ['nc|ENSG00000184470|Q9NNW7-4|TXNRD2', 'nc|ENSG00000184470|Q9NNW7-3|TXNRD2', 'ENST00000494454.5_1_22:19864636-19903590:-|nuORF', 'ENST00000400518.5_2_22:19864636-19919892:-|nuORF', 'nc|ENSG00000184470|Q9NNW7-2|TXNRD2', 'ENST00000400525.6_1_22:19864636-19929326:-|nuORF', 'ENSG00000184470|ENST00000400521|TXNRD2'] 25151 17142 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 72.708 2 -0.8760406107143084 0.27028540234872556 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 73411 6157 MTQDCWERLY True H1975_Epitope_Rep2 1343.56384295003 1343.5627499358602 28.656 2 -0.8760691342100092 0.2703058296591784 1.0 ['SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 38633 13455 HFGQWWTGKL True PC9_epitope_Rep5 1258.6247267608198 1258.62307490379 56.77 3 -0.8760713883488174 0.2703058296591784 1.0 ['ENST00000428945.1_1_1:15929692-15930004:-|nuORF'] 23185 6559 EVLKSRKYI True NCI_RA007_Epitope_Rep2 1134.67609362734 1134.6744449037901 30.125 3 -0.8761018496906927 0.2703300394703692 1.0 ['ENST00000256707.7_2_2:8870236-8870326:-|nuORF'] 14757 4559 DVNFQQYFWNR True H1975_Epitope_Rep3 1515.68951184535 1515.6884099358601 22.656 2 -0.8761157042358104 0.2703504646736088 1.0 ['ENST00000461696.1_1_3:15823132-15838055:-|nuORF'] 135780 24131 WMRLTPAGRR True PC9_epitope_Rep3 1242.6767794170198 1242.67513490379 98.104 3 -0.8761202123369298 0.2703504646736088 1.0 ['ENST00000588685.1_1_19:56989432-56989657:+|nuORF'] 107372 8876 SVLKQRISEE True H1975_Epitope_Rep3 1187.6510010783102 1187.64990993586 39.142 2 -0.8763197544521165 0.27038866884071155 1.0 ['ENST00000502859.1_1_1:50307995-50310583:+|nuORF'] 22013 16346 ESIEKYFMAP True PC9_epitope_Rep2 1213.56891124713 1213.5678099358602 68.12 2 -0.876365186690719 0.27041930246879026 1.0 ['nc|ENSG00000134215|Q9UKW4-2|VAV3', 'ENST00000343258.8_1_1:108115955-108328118:-|nuORF', 'ENSG00000134215|ENST00000370056|VAV3', 'nc|ENSG00000134215|Q9UKW4-4|VAV3'] 25116 26891 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 117.76 2 -0.876374273049676 0.27041930246879026 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15995 10277 EDRRSREAGP True PC9_epitope_Rep3 1171.56939671267 1171.56828993586 44.479 2 -0.8763819532136197 0.27041930246879026 1.0 ['ENST00000404251.1_1_7:72856506-72856560:-|nuORF'] 70081 5986 LVNQPPHS True PC9_epitope_Rep6 890.4610154806601 890.45990993586 31.344 2 -0.876515230667221 0.2705187590086623 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 91205 7485 RGCPGGGGG True NCI_RA007_Epitope_Rep5 716.3024066642798 716.30185496793 35.472 1 -0.8765353664104651 0.2705187590086623 1.0 ['ENST00000431232.6_1_16:431845-431977:-|nuORF'] 24994 17369 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 72.469 2 -0.8765460505856111 0.2705187590086623 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 82676 15945 PQQPGLKPFL True PC9_epitope_Rep3 1123.6389798426299 1123.6373249037902 66.479 3 -0.8765470546358209 0.2705187590086623 1.0 ['nc|ENSG00000178522|Q9NP70-2|AMBN', 'ENSG00000178522|ENST00000322937|AMBN'] 66059 10511 LSEHLKNP True PC9_epitope_Rep2 936.50288029264 936.50178993586 45.753 2 -0.8765590223386722 0.2705187590086623 1.0 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 112916 20489 TLLEEEYFR True PC9_epitope_Rep5 1198.5870038394198 1198.5859099358602 83.851 2 -0.8765604978945375 0.2705187590086623 1.0 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 80012 13159 PFEIVWGMRRP True PC9_epitope_Rep5 1386.7230609030998 1386.7219699358602 55.62 2 -0.8765706221328399 0.2705187590086623 1.0 ['ENST00000488457.1_1_2:25600201-25602432:-|nuORF'] 48466 20567 KAASLLSP True PC9_epitope_Rep5 785.46470387877 785.46360993586 84.157 2 -0.8766061796050212 0.27052896725440806 1.0 ['ENST00000378103.7_3_9:35748784-35748955:-|nuORF'] 11509 3878 DFIYLALRKMR True NCI_RA007_Epitope_Rep2 1424.7962258433597 1424.79457490379 19.72 3 -0.8767602242176804 0.2705595902774863 1.0 ['ENSG00000130159|ENST00000270517|ECSIT', 'nc|ENSG00000130159|Q9BQ95-4|ECSIT', 'nc|ENSG00000130159|Q9BQ95-2|ECSIT'] 3695 12599 AGRISYHQVP True PC9_epitope_Rep5 1126.5883412521 1126.5872499358602 53.462 2 -0.8767610702858051 0.2705595902774863 1.0 ['ENST00000463473.2_1_1:207087354-207095257:-|nuORF'] 130623 8167 VSSPIAGPAQ True H1975_Epitope_Rep1 925.48689587533 925.4863449679301 36.356 1 -0.8767619289444176 0.2705595902774863 1.0 ['nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'nc|ENSG00000172403|Q9UMS6|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-3|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-5|SYNPO2'] 16687 15621 EERLRKQP True PC9_epitope_Rep1 1054.5883412520998 1054.5872499358602 64.905 2 -0.8767670298704108 0.2705697973804993 1.0 ['ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 25132 15215 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 66.146 2 -0.8768035536259949 0.27057621806173565 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 94440 20226 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 83.82 2 -0.8768377488775213 0.27057621806173565 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 123797 10762 VGRLHGSVPNL True NCI_RA007_Epitope_Rep3 1147.64619048139 1147.6450899358601 49.378 2 -0.8769218330347757 0.2706246152124028 1.0 ['ENSG00000006025|ENST00000007414|OSBPL7', 'ENST00000583167.5_1_17:45893705-45894118:-|nuORF', 'ENST00000580808.1_1_17:45893705-45894250:-|nuORF', 'nc|ENSG00000006025|Q9BZF2-2|OSBPL7'] 94435 19682 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 81.669 2 -0.876932191069684 0.2706246152124028 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 13927 20974 DQYKLYSK True PC9_epitope_Rep1 1043.52876068731 1043.52766993586 85.502 2 -0.8769981896501863 0.27064123910397225 1.0 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'GRIN2A|p.F1234Sfs*51|1|0.28|ENSG00000183454|chr16:9763845-9763845|G/-|frameshift_variant', 'ENSG00000183454|ENST00000330684|GRIN2A'] 129604 17598 VRNSPTTTR True NCI_RA007_Epitope_Rep4 1030.55195574338 1030.55084993586 76.133 2 -0.8770060858426031 0.27064123910397225 1.0 ['ENST00000216068.8_1_22:39175605-39178756:-|nuORF', 'ENST00000406199.3_1_22:39176875-39178747:-|nuORF'] 100297 9791 SKFDTKSHND True H1975_Epitope_Rep3 1177.53636524889 1177.53526993586 42.685 2 -0.8770192240428203 0.27064123910397225 1.0 ['nc|ENSG00000136487|P01242-3|GH2', 'ENSG00000136487|ENST00000423893|GH2'] 65196 3673 LQRINRAI True NCI_RA007_Epitope_Rep4 982.6035973934199 982.60250993586 20.234 2 -0.8770340300490219 0.270643870498363 1.0 ['ENSG00000167094|ENST00000373289|TTC16', 'ENST00000488285.1_1_9:130482605-130486777:+|nuORF', 'nc|ENSG00000167094|Q8NEE8-2|TTC16'] 84442 13405 QAEVNCGL True H1975_Epitope_Rep3 832.3749028981999 832.37435496793 56.83 1 -0.8770539295252742 0.270643870498363 1.0 ['nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 18704 12803 ELALFFKGPGP True PC9_epitope_Rep3 1174.6386454894598 1174.63754993586 54.269 2 -0.8770652086955597 0.270643870498363 1.0 ['ENST00000271332.3_1_1:109817722-109817794:+|nuORF'] 65191 7680 LQQVEDLERR True H1975_Epitope_Rep2 1284.6786128084798 1284.6769649037901 34.493 3 -0.8770990823652911 0.27065028820862946 1.0 ['nc|ENSG00000226266|Q9UIF8-4|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-2|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-5|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-3|BAZ2B', 'ENSG00000123636|ENST00000392783|BAZ2B', 'ENST00000474437.1_1_2:160182413-160204074:-|nuORF'] 69123 13279 LTRKSWEL True PC9_epitope_Rep2 1031.5763795860698 1031.5752899358602 56.354 2 -0.8771294921763451 0.27065028820862946 1.0 ['ENST00000366595.7_1_1:236140589-236140733:-|nuORF'] 60617 20691 LHIDSLNHV True PC9_epitope_Rep5 1046.5508931142201 1046.5497899358602 84.643 2 -0.8772396255457136 0.27068352872051704 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 88745 17412 QTLSKLIDYIY True PC9_epitope_Rep4 1355.7336680731098 1355.73256993586 74.969 2 -0.8772712360094131 0.27068352872051704 1.0 ['nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF'] 137908 14933 YEWWFRWRLDR True PC9_epitope_Rep1 1711.8371791385496 1711.8360899358602 62.263 2 -0.8772957195860613 0.27068352872051704 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 82842 478 PRSSSLWIELC True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 2.7262 3 -0.8772986086197613 0.27068352872051704 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 20243 17747 ENLSVDLTY True PC9_epitope_Rep1 1052.50260550912 1052.50207496793 73.062 1 -0.8773312959585049 0.27068352872051704 1.0 ['ENSG00000090060|ENST00000216277|PAPOLA', 'PAPOLA|p.D684Pfs*68|1|0.12|ENSG00000090060|chr14:96560693-96560694|-/CCCTGCGTCGTCAAGAAGCACCGCACAGGAGGTGA|frameshift_variant', 'ENST00000555701.5_1_14:97009102-97018851:+|nuORF'] 25134 16020 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 69.491 2 -0.8773719005923841 0.27068352872051704 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 55250 11493 LADKVYFLPI True NCI_RA007_Epitope_Rep1 1177.67469664501 1177.67358993586 48.67 2 -0.8774124902159042 0.27069373137669095 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 25097 26248 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 111.48 2 -0.8774237857781161 0.27070393374741203 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 4185 21225 AHWIPFITVGP True PC9_epitope_Rep3 1236.6655289436399 1236.6638849037902 86.932 3 -0.8774570415287652 0.27071413583269216 1.0 ['TEX35|p.G145Efs*45|1|0.13|ENSG00000240021|chr1:178520764-178520764|G/-|frameshift_variant'] 127097 16990 VLTERGLLL True PC9_epitope_Rep6 1012.6280808057599 1012.62698993586 77.903 2 -0.877469886223105 0.27073453914697776 1.0 ['PHLDA3|p.Q39L|1|0.19|ENSG00000174307|chr1:201468671-201468671|T/A|missense_variant'] 42124 13152 IDNFSHNQSND True PC9_epitope_Rep6 1289.52725711717 1289.52562490379 62.231 3 -0.8774757855982046 0.27073453914697776 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant'] 64858 4338 LQDPVPKE True NCI_RA007_Epitope_Rep5 924.4916469026 924.49054993586 23.292 2 -0.8774929809667537 0.27074474037600715 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 55952 19229 LARLTKEERLK True NCI_RA007_Epitope_Rep3 1355.8248831193498 1355.82322490379 83.945 3 -0.877577047727471 0.2708108939836898 1.0 ['nc|ENSG00000069535|P27338-2|MAOB', 'ENSG00000069535|ENST00000378069|MAOB'] 41598 8917 IADFVLVWEE True NCI_RA007_Epitope_Rep1 1219.6124903112698 1219.6113899358602 38.686 2 -0.8775909444797989 0.2708173056748402 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7'] 62171 9911 LLEMEFEERK True H1975_Epitope_Rep3 1322.6540378534198 1322.65294993586 43.155 2 -0.877597070845057 0.2708173056748402 1.0 ['ITPRIPL1|p.P244Hfs*10|1|0.38|ENSG00000198885|chr2:96327357-96327357|C/-|frameshift_variant', 'ITPRIPL1|p.L296Gfs*4|1|0.15|ENSG00000198885|chr2:96327515-96327516|TC/-|frameshift_variant', 'nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1', 'ENSG00000198885|ENST00000439118|ITPRIPL1', 'nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1'] 71600 4919 MDHVNEVYVKE True PC9_epitope_Rep5 1361.6285513815703 1361.62690490379 23.962 3 -0.8776716592677352 0.2708414927544341 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 3667 6875 AGQAGVRSSW True PC9_epitope_Rep5 1017.49919189453 1017.49808993586 31.415 2 -0.877729073615332 0.2708936539241604 1.0 ['nc|ENSG00000160753|Q9BVN2-3|RUSC1'] 117437 14051 TVQDVLETYQK True NCI_RA007_Epitope_Rep3 1322.67179609254 1322.67068993586 62.574 2 -0.8777581764753171 0.27090006294146446 1.0 ['POMK|p.A324V|1|0.51|ENSG00000185900|chr8:43122795-43122795|C/T|missense_variant'] 68854 18771 LTMKMRTV True PC9_epitope_Rep5 978.53544337422 978.53434993586 77.214 2 -0.877798245515414 0.27090006294146446 1.0 ['EIF2AK4|p.A725Pfs*66|1|0.18|ENSG00000128829|chr15:39976768-39976768|G/-|frameshift_variant'] 124354 14578 VGTTYKHL True PC9_epitope_Rep5 917.4970666362099 917.49596993586 61.075 2 -0.8778036572152462 0.2709102607138861 1.0 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'CAPRIN2|p.G961Efs*13|1|0.05|ENSG00000110888|chr12:30710254-30710255|-/AGTGGTGTGATCATAGCTCATTGTAACCT|frameshift_variant', 'ENSG00000110888|ENST00000695402|CAPRIN2'] 119473 16515 VARKTGFP True PC9_epitope_Rep1 874.5024863698198 874.50138993586 68.348 2 -0.8778639619686162 0.2709344448018798 1.0 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 25135 16730 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 72.535 2 -0.8778891048272689 0.27095104895104893 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25146 3503 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 19.307 2 -0.8778891264591047 0.27095104895104893 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 107752 19206 SVSPPVSIVA True PC9_epitope_Rep4 954.53859709502 954.5380449679301 81.975 1 -0.8778904733981655 0.27095104895104893 1.0 ['UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 120099 8943 VDYFTIQNP True NCI_RA007_Epitope_Rep1 1095.52367530687 1095.52256993586 38.788 2 -0.878027612338463 0.27107313184430987 1.0 ['ENSG00000094755|ENST00000265294|GABRP'] 55396 19789 LAESIVAQA True PC9_epitope_Rep3 900.4916469025999 900.49054993586 81.349 2 -0.8780463023481528 0.27108332634052196 1.0 ['nc|ENSG00000159753|Q6F5E8-2|CARMIL2', 'ENSG00000159753|ENST00000334583|CARMIL2', 'ENST00000602321.5_1_16:67685803-67685989:+|nuORF'] 89264 25326 QVVLQVAAAT True PC9_epitope_Rep2 998.5760452328999 998.57494993586 103.09 2 -0.8780956715197844 0.27108593804629044 1.0 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'DOT1L|p.D1250Efs*47|1|0.2|ENSG00000104885|chr19:2226271-2226293|CATCGGCCTGGCCAAGTCGGCGG/-|frameshift_variant', 'ENSG00000104885|ENST00000398665|DOT1L', 'DOT1L|p.N522Tfs*35|1|0.31|ENSG00000104885|chr19:2213545-2213545|A/-|frameshift_variant'] 125349 13066 VIQINLNSIVP True H1975_Epitope_Rep3 1208.71287305888 1208.71176993586 55.5 2 -0.8781087554654899 0.27108593804629044 1.0 ['ENSG00000136381|ENST00000258886|IREB2'] 67039 13568 LSPTDYHFFK True PC9_epitope_Rep1 1253.6080736371698 1253.60641490379 57.045 3 -0.878147716662784 0.27108593804629044 1.0 ['HSMAR1_dup583|chr14:23628624-23629718:+|1.7841419024017564|0.342314790317388|2.38|516.0|10|1|sense'] 117899 5768 TWLHYYRNWLQ True H1975_Epitope_Rep1 1578.77318189966 1578.7715249037901 27.258 3 -0.8782658787790786 0.271194025676167 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2'] 59526 10107 LFSDQQQSLY True H1975_Epitope_Rep2 1227.57716743171 1227.5755349037902 43.872 3 -0.8783221281633747 0.27122460109916235 1.0 ['ENST00000452859.6_1_17:46185151-46190715:+|nuORF'] 30308 24297 GAAILEKF True H1975_Epitope_Rep1 847.4803539429099 847.47924993586 100.76 2 -0.8783409740208306 0.27122460109916235 1.0 ['ENST00000473160.6_1_19:35622134-35624715:-|nuORF'] 123117 15891 VGKLLNEV True PC9_epitope_Rep6 870.51746772762 870.51636993586 73.403 2 -0.8783614486260168 0.27122460109916235 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 61829 4894 LLAVSHVG True H1975_Epitope_Rep3 794.46503823194 794.46394993586 23.952 2 -0.8784086044303707 0.27128455375494626 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 102693 14296 SLYSVTIPDHL True H1975_Epitope_Rep1 1243.6448530687098 1243.6437499358601 60.176 2 -0.8784369757741164 0.27128455375494626 1.0 ['ENST00000393196.7_1_17:49239254-49239476:+|nuORF'] 24976 20516 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 85.325 2 -0.8784372161303686 0.27128455375494626 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 83510 16126 PTSVLFSSAS True PC9_epitope_Rep3 994.4971262058601 994.49602993586 67.177 2 -0.8784409503670321 0.27128455375494626 1.0 ['ENSG00000254726|ENST00000532414|MEX3A'] 59970 15985 LGHEDTVP True PC9_epitope_Rep5 866.4133965819 866.41228993586 66.477 2 -0.878529484851969 0.27128455375494626 1.0 ['LTBP2|p.P1682H|1|0.2|ENSG00000119681|chr14:74502778-74502778|G/T|missense_variant'] 60355 10346 LGSRVYLRAW True NCI_RA007_Epitope_Rep2 1219.6825759901096 1219.6814699358602 44.833 2 -0.8785392408068498 0.27128455375494626 1.0 ['ENST00000397289.6_1_22:36545187-36556848:-|nuORF', 'ENST00000432700.5_1_22:36545365-36556848:-|nuORF', 'ENST00000349314.6_1_22:36541572-36556848:-|nuORF'] 33481 15508 GLATPPGHPV True PC9_epitope_Rep5 944.5079656730799 944.50686993586 64.661 2 -0.878540766681106 0.27128455375494626 1.0 ['ENST00000463515.1_1_10:103339125-103339206:-|nuORF'] 67884 21574 LTATPRDVLQI True PC9_epitope_Rep1 1225.70303665117 1225.70192993586 87.805 2 -0.8785530804028047 0.27128455375494626 1.0 ['ENST00000581080.1_1_17:38497122-38497602:-|nuORF'] 111842 20823 TIMARLLAI True PC9_epitope_Rep1 1000.6103225666399 1000.60922993586 84.925 2 -0.8785647618436206 0.27128455375494626 1.0 ['ABCA13|p.P4589A|1|0.17|ENSG00000179869|chr7:48516849-48516849|C/G|missense_variant'] 129476 26018 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 107.69 2 -0.87858857503977 0.27128455375494626 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 121635 14846 VFHRERLEESA True NCI_RA007_Epitope_Rep4 1371.6895118453501 1371.6884099358601 64.568 2 -0.8787111900957197 0.2712947427293065 1.0 ['ENST00000320033.4_1_17:41476390-41477029:+|nuORF'] 30347 9641 GAAQVRIKIL True PC9_epitope_Rep4 1067.6815133609498 1067.68040993586 44.708 2 -0.8787864997133427 0.2713558705925118 1.0 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 42885 7832 IERALDEV True H1975_Epitope_Rep2 943.49746055903 943.49636993586 35.075 2 -0.878801030350438 0.2713558705925118 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 25019 10963 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 46.638 2 -0.8788010390333718 0.2713558705925118 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79291 19658 PAPTLLKMT True PC9_epitope_Rep6 970.55213898418 970.55104993586 88.273 2 -0.878818177319927 0.2713558705925118 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 82697 11394 PQTIKKTRFPH True NCI_RA007_Epitope_Rep1 1351.77245362367 1351.7713499358601 48.289 2 -0.8788340298238114 0.2713558705925118 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF'] 82856 1474 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 8.2904 3 -0.8788635922303547 0.2713558705925118 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 25059 22613 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 92.694 2 -0.8788743311944672 0.27136605757266485 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 19972 14769 ELWAQALQTF True PC9_epitope_Rep3 1205.6080736371698 1205.6069699358602 61.944 2 -0.8789211858187153 0.27137624426797896 1.0 ['ENST00000337619.9_1_7:100803850-100804129:+|nuORF'] 77486 5030 NTCCFCWCCC True NCI_RA007_Epitope_Rep1 1184.3040061643599 1184.30290993586 23.65 2 -0.8789627057049917 0.27140041102210294 1.0 ['ENSG00000091844|ENST00000206262|RGS17'] 73840 8983 NALWTFCF True H1975_Epitope_Rep3 1000.4476739156399 1000.4471749679301 39.549 1 -0.8789741130429004 0.2714105969523277 1.0 ['ENST00000368073.7_1_1:160187265-160187343:-|nuORF'] 11502 14328 DFILQVPV True PC9_epitope_Rep5 929.52221875489 929.52112993586 60.113 2 -0.8790404273116118 0.27141698820108484 1.0 ['ENST00000570265.5_1_15:36871929-37039277:+|nuORF', 'ENST00000566677.1_1_15:37001404-37100651:+|nuORF', 'nc|ENSG00000186073|Q9Y2V0-2|CDIN1', 'ENSG00000186073|ENST00000566621|CDIN1'] 121315 12613 VETYFHEF True PC9_epitope_Rep5 1070.4709114580198 1070.4698099358602 53.518 2 -0.8790476299125783 0.27141698820108484 1.0 ['ENSG00000172009|ENST00000307741|THOP1'] 56684 8190 LDKLRGQDP True NCI_RA007_Epitope_Rep1 1040.56145779792 1040.56036993586 35.854 2 -0.8790877596473365 0.2714411530342639 1.0 ['nc|ENSG00000166839|Q495B1-6|ANKDD1A'] 39105 23538 HHWEVHSPL True PC9_epitope_Rep3 1140.54647644012 1140.54484490379 95.819 3 -0.8791577707613997 0.2714615223317257 1.0 ['ENST00000315520.9_1_12:50367174-50369543:+|nuORF'] 140400 6775 YREWRRYYEVW True NCI_RA007_Epitope_Rep1 1704.8161093408 1704.8144549037902 30.361 3 -0.8791678677135866 0.2714615223317257 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 81033 24471 PINIQVFT True NCI_RA007_Epitope_Rep1 930.51746772762 930.51636993586 101.39 2 -0.879195016340451 0.27146411697279765 1.0 ['ZP4|p.V298I|1|0.26|ENSG00000116996|chr1:237885834-237885834|C/T|missense_variant'] 126728 25899 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 107.19 3 -0.8792131503220061 0.27146411697279765 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 47317 6334 IVEHLEELENA True H1975_Epitope_Rep1 1294.6404959642598 1294.6393899358602 29.427 2 -0.879224312871238 0.27146411697279765 1.0 ['ENSG00000140829|ENST00000268482|DHX38'] 4731 5086 ALDFHNVL True NCI_RA007_Epitope_Rep5 927.48141657207 927.48030993586 26.263 2 -0.8792397786202949 0.27147050601062345 1.0 ['ENST00000339431.8_1_7:102585067-102585361:+|nuORF'] 113174 9090 TLPRTAKL True PC9_epitope_Rep4 898.5600012459399 898.55890993586 42.551 2 -0.8792487117324448 0.27147050601062345 1.0 ['RGL1|p.R756L|1|0.18|ENSG00000143344|chr1:183926252-183926252|G/T|missense_variant'] 85388 7585 QEVETDWGLLK True NCI_RA007_Epitope_Rep2 1316.66123140884 1316.6601299358601 34.127 2 -0.8792893712743964 0.27148068939489245 1.0 ['CAPN6|p.R283Gfs*11|1|0.19|ENSG00000077274|chrX:111251586-111251596|AGGGGTTTCTC/-|frameshift_variant', 'ENSG00000077274|ENST00000324068|CAPN6'] 33229 5699 GKDVTLQGE True NCI_RA007_Epitope_Rep1 945.47672511445 945.47562993586 26.226 2 -0.8793108192801667 0.2715048502977272 1.0 ['nc|ENSG00000103248|Q2M296-4|MTHFSD', 'nc|ENSG00000103248|Q2M296-2|MTHFSD', 'nc|ENSG00000103248|Q2M296-3|MTHFSD', 'ENSG00000103248|ENST00000360900|MTHFSD'] 93299 24111 RPRRRPRRWLK True PC9_epitope_Rep3 1575.9810984639896 1575.9800099358602 98.025 2 -0.8793282770971682 0.27151503291726653 1.0 ['ENST00000251102.12_1_16:57965650-57974178:-|nuORF'] 114189 7821 TPLGCYKKLIE True H1975_Epitope_Rep1 1263.6896950861499 1263.6885899358601 35.034 2 -0.8793623214789004 0.2715252152521525 1.0 ['nc|ENSG00000113552|P46926-2|GNPDA1', 'nc|ENSG00000163281|Q8TDQ7-3|GNPDA2', 'nc|ENSG00000163281|Q8TDQ7-2|GNPDA2', 'ENSG00000163281|ENST00000295448|GNPDA2', 'ENSG00000113552|ENST00000311337|GNPDA1'] 83784 25773 PVKKSLLG True PC9_epitope_Rep1 840.5432885526399 840.54218993586 104.2 2 -0.8793699965755423 0.2715353973023971 1.0 ['ENST00000397909.6_1_12:78388596-78392184:+|nuORF'] 74576 6797 NGEAAGTRIW True NCI_RA007_Epitope_Rep1 1073.52540664237 1073.5243099358602 30.445 2 -0.8794343967694671 0.2715455790680122 1.0 ['ENST00000585553.5_1_17:43213511-43213673:+|nuORF'] 66881 10486 LSNIRWWLEEY True H1975_Epitope_Rep1 1507.7459640923103 1507.7448699358602 45.289 2 -0.8794502990631233 0.27155196511432883 1.0 ['ENSG00000114480|ENST00000429644|GBE1'] 64287 20291 LPIVRTWRLN True H1975_Epitope_Rep3 1266.75607528354 1266.75442490379 84.853 3 -0.8794861791578963 0.27155196511432883 1.0 ['ENST00000402426.2_1_6:73765044-73765512:+|nuORF'] 29741 11864 FVNDINNHPPV True H1975_Epitope_Rep1 1264.6200353032 1264.61892993586 50.634 2 -0.8795631478699633 0.2715900990929293 1.0 ['FAT4|p.D470N|1|0.06|ENSG00000196159|chr4:125317819-125317819|G/A|missense_variant'] 16434 16345 EEKSLLNLS True PC9_epitope_Rep4 1031.54989005471 1031.54937496793 70.836 1 -0.8796416166472406 0.2716282320055905 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 70604 25271 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 105.12 3 -0.8797429140926615 0.2716499671599659 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 59971 4647 LGHGDNTTQLK True H1975_Epitope_Rep3 1182.59929985862 1182.59820993586 22.997 2 -0.8797670673477764 0.2716499671599659 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant'] 104562 8702 SQQALERIWKE True H1975_Epitope_Rep1 1386.7255630008997 1386.72446993586 38.399 2 -0.8797833776014334 0.2716499671599659 1.0 ['ENST00000585266.5_1_17:9939966-9940032:-|nuORF'] 66828 9702 LSMFHVCRR True PC9_epitope_Rep1 1147.57428849443 1147.57318993586 42.176 2 -0.8798187019479806 0.2716499671599659 1.0 ['ENST00000531236.1_1_11:71209546-71209642:+|nuORF'] 25136 19410 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 83.928 2 -0.8798248827011325 0.2716499671599659 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 11201 6285 DEAM[Oxidation]RRLQERM[Oxidation] True H1975_Epitope_Rep1 1465.6765820473697 1465.67548993586 29.242 2 -0.8798253650733404 0.2716499671599659 1.0 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'ENST00000599652.5_1_19:49965164-49969478:+|nuORF'] 25196 2582 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 14.896 2 -0.8798383060679397 0.2716499671599659 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 27444 12131 FLYRMRDYMPP True NCI_RA007_Epitope_Rep2 1487.7053622336298 1487.70426993586 51.781 2 -0.8798385967096959 0.2716499671599659 1.0 ['ENSG00000188676|ENST00000502986|IDO2', 'IDO2|p.G381Afs*8|1|0.19|ENSG00000188676|chr8:40015517-40015517|G/-|frameshift_variant'] 61300 17622 LIQDYFRKFKK True NCI_RA007_Epitope_Rep2 1484.8503695911998 1484.84926993586 73.286 2 -0.8798405372076161 0.2716499671599659 1.0 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 103438 4602 SPPRRARHGS True H1975_Epitope_Rep3 1119.6009716244698 1119.5998699358602 22.824 2 -0.8798795429258022 0.27167032322074874 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 25137 19500 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 84.271 2 -0.8798831616277308 0.27167032322074874 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 81897 16214 PLRYMCITLL True PC9_epitope_Rep4 1221.66137216333 1221.66026993586 70.311 2 -0.8799297851425857 0.2716934210710144 1.0 ['LRRC52|p.H239L|1|0.33|ENSG00000162763|chr1:165563598-165563598|A/T|missense_variant'] 121092 7385 VERERELP True NCI_RA007_Epitope_Rep5 1026.5458077337798 1026.54470993586 35.084 2 -0.8799410720249436 0.2716934210710144 1.0 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 137613 3506 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 17.553 3 -0.879948066528061 0.2716934210710144 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'RNF213|p.A949Rfs*39|1|0.23|ENSG00000173821|chr17:80317221-80317221|G/-|frameshift_variant', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 31108 9129 GAVIVSTPQD True H1975_Epitope_Rep3 985.5080252427299 985.50692993586 40.104 2 -0.8799825064670543 0.2716934210710144 1.0 ['ENSG00000151413|ENST00000281081|NUBPL'] 110621 8159 TFTPGRTP True PC9_epitope_Rep6 875.45011644379 875.44900993586 40.929 2 -0.8800065866213059 0.2716934210710144 1.0 ['ENST00000521792.2_1_8:43126156-43127029:-|nuORF'] 46389 7127 ISSAIQLLEDP True H1975_Epitope_Rep1 1184.6288686514 1184.6277699358602 32.44 2 -0.8800175186394673 0.2716934210710144 1.0 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 109554 7262 TDSRIRKL True H1975_Epitope_Rep1 987.58252759567 987.58142993586 32.943 2 -0.8800338055931637 0.2716934210710144 1.0 ['ENST00000606367.1_1_6:31165433-31165721:-|nuORF'] 96402 7455 SAAAARTRLL True PC9_epitope_Rep4 1028.60907669668 1028.6079699358602 36.03 2 -0.8800441121498218 0.2716934210710144 1.0 ['nc|ENSG00000204682|Q5T4H9|MIR1915HG'] 57918 6635 LEGFKVMCKI True NCI_RA007_Epitope_Rep2 1166.61917299818 1166.6175149037902 30.42 3 -0.8800548892988782 0.2716934210710144 1.0 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'MSH6|p.E1324Vfs*18|1|0.08|ENSG00000116062|chr2:47806620-47806621|-/TGGA|frameshift_variant', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 3182 8824 AGEDRPDVSI True PC9_epitope_Rep1 1057.50400249145 1057.50290993586 38.783 2 -0.88005532526528 0.2716934210710144 1.0 ['nc|ENSG00000147121|Q5JUW0-3|KRBOX4'] 43854 12250 IHSQQHVL True NCI_RA007_Epitope_Rep5 960.51411368268 960.5130099358599 53.769 2 -0.8800720047674867 0.2716934210710144 1.0 ['ENSG00000197386|ENST00000355072|HTT'] 137650 3162 YEIENGVVWV True NCI_RA007_Epitope_Rep1 1206.59208921986 1206.59044490379 16.191 3 -0.8801363316416978 0.2716934210710144 1.0 ['nc|ENSG00000171560|P02671|FGA'] 15141 8183 EAAAVVLQ True H1975_Epitope_Rep3 799.4439684341899 799.44286993586 36.456 2 -0.8801455141326131 0.2716934210710144 1.0 ['ENSG00000169047|ENST00000305123|IRS1'] 111656 11597 TIEELSAQI True PC9_epitope_Rep3 1002.5233409537 1002.52224993586 49.621 2 -0.8801561171645063 0.2716934210710144 1.0 ['ENST00000427733.1_1_13:90882929-90883235:+|nuORF'] 91318 18596 RGRKGQRSLT True NCI_RA007_Epitope_Rep4 1157.6741365647297 1157.67302993586 80.436 2 -0.8801801820619051 0.2716934210710144 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 79682 16310 PDSFNIPGSS True PC9_epitope_Rep2 1019.45598966987 1019.45488993586 67.982 2 -0.880180400158825 0.2716934210710144 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 125434 8485 VITLDKQV True NCI_RA007_Epitope_Rep3 914.5436824754601 914.54258993586 40.451 2 -0.8802177929863984 0.27170617901398414 1.0 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 82517 23770 PPRRGGVLLG True NCI_RA007_Epitope_Rep3 1020.6192474575597 1020.61867496793 103.03 1 -0.8802248601313827 0.27170617901398414 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 80387 18727 PGHMGPRC True H1975_Epitope_Rep1 853.36871240229 853.36760993586 78.091 2 -0.8802285434040585 0.27170617901398414 1.0 ['ENSG00000115221|ENST00000283249|ITGB6', 'nc|ENSG00000115221|P18564-2|ITGB6'] 83631 13818 PVDQLIAV True PC9_epitope_Rep5 853.4909186266099 853.48982993586 58.169 2 -0.8802463701220476 0.27170617901398414 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 6021 6101 APKQTPDSGKP True NCI_RA007_Epitope_Rep1 1124.5825871653199 1124.58094490379 27.769 3 -0.880356497338635 0.27171392652605114 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'ENST00000464771.1_1_10:129899883-129901361:-|nuORF'] 19656 3549 ELREAIRKL True NCI_RA007_Epitope_Rep4 1126.6822416369398 1126.68058490379 19.664 3 -0.8804293796379522 0.27171392652605114 1.0 ['CABP1|p.M331I|1|0.55|ENSG00000157782|chr12:120661124-120661124|G/A|missense_variant'] 22807 5984 EVAAVAVLMC True PC9_epitope_Rep3 1004.5034745395999 1004.50236993586 28.072 2 -0.8804777143386636 0.27171392652605114 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 33830 13829 GLNKKPEL True PC9_epitope_Rep6 897.5283667644899 897.52726993586 64.999 2 -0.8804820428050927 0.27171392652605114 1.0 ['OR13G1|p.T15N|1|0.46|ENSG00000197437|chr1:247672998-247672998|G/T|missense_variant'] 13352 6523 DLVWGSERPP True H1975_Epitope_Rep3 1154.57202248162 1154.57092993586 30.058 2 -0.8804907001112932 0.27171392652605114 1.0 ['ENSG00000122121|ENST00000371106|XPNPEP2'] 123892 22902 VGRRRRHR True PC9_epitope_Rep2 1091.6649092937098 1091.6638099358602 93.6 2 -0.8805135394030287 0.27171392652605114 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 87970 16050 QRMEEFQRYCW True NCI_RA007_Epitope_Rep4 1574.6758530104998 1574.67421490379 69.613 3 -0.8805460766468732 0.27171392652605114 1.0 ['ENSG00000186009|ENST00000335288|ATP4B'] 46721 11660 ITEDKINALVK True NCI_RA007_Epitope_Rep2 1242.71835236214 1242.71724993586 49.948 2 -0.8805488983782451 0.27171392652605114 1.0 ['ENST00000470649.1_2_17:15947979-15948198:+|nuORF'] 42126 19629 IDNIAHIFGF True PC9_epitope_Rep4 1145.58694426977 1145.58584993586 83.619 2 -0.8805704267210267 0.27171392652605114 1.0 ['ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74467717-74469013:-|nuORF'] 60123 10737 LGLVDSLI True H1975_Epitope_Rep3 828.49566965388 828.49456993586 46.378 2 -0.8805913894077586 0.27172409939796904 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'nc|ENSG00000186191|P59827-2|BPIFB4'] 61775 5504 LLALHSAA True PC9_epitope_Rep4 794.4650382319401 794.46394993586 27.931 2 -0.8806077134890934 0.2717342719856967 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 129503 24457 VRKLSGLLIL True NCI_RA007_Epitope_Rep3 1110.7488646447798 1110.74776993586 105.84 2 -0.880695302170799 0.27175461630862924 1.0 ['ENSG00000180044|ENST00000326474|C3orf80'] 93612 19050 RQPRLRLPT True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 80.137 2 -0.8807008779245765 0.27175461630862924 1.0 ['nc|ENSG00000112425|B3EWF7|EPM2A'] 25022 13842 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 57.861 2 -0.8807079323080467 0.2717571965305809 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 55907 10588 LAQQLQKAL True PC9_epitope_Rep4 1011.6076797143498 1011.60658993586 48.469 2 -0.880717548403824 0.2717571965305809 1.0 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 109503 6133 TDNGPGYC True NCI_RA007_Epitope_Rep3 825.29631822433 825.29522993586 31.113 2 -0.8807211442021624 0.2717571965305809 1.0 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG851|Q9QC07|ERVK-18_pol', 'nc|ENSG832|P63136|ERVK-25_pol', 'HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|36|1|sense', 'nc|ENSG801|P63132|HERVK_113_pro', 'nc|ENSG826|Q9BXR3|ERVK-6_gag', 'nc|ENSG853|Q9UQG0|ERVK-11', 'nc|ENSG855|P10266|ERVK-10_pol', 'nc|ENSG844|Q9WJR5|ERVK-19_pol', 'nc|ENSG814|P63133|ERVK-8_pol'] 124085 9424 VGSLTLHDP True PC9_epitope_Rep4 937.48689587533 937.48578993586 43.86 2 -0.8807466577263178 0.2717813346741529 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 29181 19981 FTQWQLTL True PC9_epitope_Rep1 1035.5389314481897 1035.5378299358601 81.682 2 -0.8808166558968294 0.2718068318297349 1.0 ['ENSG00000166860|ENST00000300101|ZBTB39'] 132298 8043 VTWSSLPPDP True H1975_Epitope_Rep1 1097.53932537101 1097.53822993586 35.883 2 -0.8808642460152114 0.2718068318297349 1.0 ['ENSG00000068354|ENST00000376771|TBC1D25'] 46650 11707 ITDNMNLYIE True H1975_Epitope_Rep3 1224.56963952312 1224.5685499358601 50.171 2 -0.8808663625767594 0.2718068318297349 1.0 ['ENST00000289316.2_1_6:26171232-26171412:+|nuORF'] 25024 14097 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 58.865 2 -0.8808785213526669 0.2718068318297349 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18418 8732 EIWEKTM[Oxidation]WPPT True H1975_Epitope_Rep1 1432.6696882979998 1432.6685899358602 38.516 2 -0.880884031645651 0.2718068318297349 1.0 ['ENST00000306562.7_1_1:249142917-249143094:+|nuORF'] 46907 10734 ITMAQIDQA True PC9_epitope_Rep4 989.48518162317 989.48408993586 49.046 2 -0.8808875383798775 0.2718068318297349 1.0 ['nc|ENSG00000152520|Q58A45-4|PAN3', 'ENST00000503791.5_1_13:28712794-28846220:+|nuORF', 'nc|ENSG00000152520|Q58A45-3|PAN3', 'ENSG00000152520|ENST00000380958|PAN3', 'nc|ENSG00000152520|Q58A45-2|PAN3'] 110727 8020 TGFSRSSAI True PC9_epitope_Rep4 924.46649478392 924.46538993586 38.299 2 -0.8808956306910642 0.2718068318297349 1.0 ['nc|ENSG00000143443|Q9BUN1-2|MENT', 'ENSG00000143443|ENST00000368926|C1orf56'] 16934 10976 EFRERQKEQRK True H1975_Epitope_Rep1 1532.8171719699596 1532.81551490379 47.184 3 -0.8808983176686059 0.2718068318297349 1.0 ['nc|ENSG00000140368|O43586-2|PSTPIP1', 'ENSG00000140368|ENST00000558012|PSTPIP1'] 134042 22535 VYIYIYTYLHI True PC9_epitope_Rep3 1459.77513896227 1459.7740499358601 91.954 2 -0.8809106550421848 0.27181700113117435 1.0 ['ENST00000498707.5_1_3:64502565-64502754:-|nuORF'] 69377 10012 LTVVPQGQQG True PC9_epitope_Rep5 1025.5505587610498 1025.54946993586 43.488 2 -0.8809396049658936 0.2718411350687074 1.0 ['nc|ENSG00000068079|P80217-2|IFI35', 'ENSG00000068079|ENST00000415816|IFI35'] 25904 10401 FFLWLRRMQA True NCI_RA007_Epitope_Rep3 1366.73323166398 1366.73158490379 47.979 3 -0.8809744354126865 0.27184371116169304 1.0 ['nc|ENSG00000228727|Q5SSQ6|SAPCD1', 'ENSG00000228727|ENST00000415669|SAPCD1'] 139366 23711 YLLVKITRLG True NCI_RA007_Epitope_Rep4 1174.74377926434 1174.7426899358602 102.82 2 -0.8810541500063677 0.27184371116169304 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 73556 13646 MVRTCCGVLT True PC9_epitope_Rep2 1081.50824265021 1081.50714993586 57.781 2 -0.8810693077027963 0.27184371116169304 1.0 ['nc|ENSG00000160224|O43918-3|AIRE'] 131948 19652 VTRWRRNE True PC9_epitope_Rep4 1115.59482361487 1115.5937299358602 83.71 2 -0.8811138192629473 0.27188180751829305 1.0 ['nc|ENSG00000142185|O94759-2|TRPM2', 'ENSG00000142185|ENST00000397928|TRPM2'] 79652 4918 PDQFYRLWL True NCI_RA007_Epitope_Rep2 1236.6291434349198 1236.6274949037902 23.75 3 -0.8811848458015481 0.27189834531871815 1.0 ['ENSG00000007384|ENST00000262316|RHBDF1', 'ENST00000486045.1_1_16:109134-109779:-|nuORF', 'ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74469085-74473795:-|nuORF'] 25025 14568 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 60.714 2 -0.8811926838461959 0.27189834531871815 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 110896 10163 TGVFAFSVM True H1975_Epitope_Rep3 957.46298962661 957.46188993586 44.134 2 -0.8812064774582001 0.27189834531871815 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1', 'nc|ENSG00000070729|Q14028-2|CNGB1'] 56541 14717 LDGKEVSVF True PC9_epitope_Rep5 992.5178616504398 992.51731496793 61.608 1 -0.8812563055918992 0.27192247542448617 1.0 ['nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2'] 140103 5470 YQNARDLLN True NCI_RA007_Epitope_Rep5 1105.55162139021 1105.5505299358601 27.726 2 -0.881271376505856 0.2719491762077632 1.0 ['nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 68484 12388 LTFPMWNP True PC9_epitope_Rep1 1004.47897404392 1004.47786993586 52.51 2 -0.8813184535577998 0.2719491762077632 1.0 ['ENST00000403290.5_1_11:13331558-13347974:+|nuORF'] 57739 12805 LEEMKRSL True PC9_epitope_Rep3 1004.5324661687599 1004.53136993586 54.277 2 -0.8813244849119658 0.2719491762077632 1.0 ['ENSG00000116783|ENST00000326637|TNNI3K', 'nc|ENSG00000116783|Q59H18-1|TNNI3K'] 78583 3844 NYRRYRQQTYF True H1975_Epitope_Rep3 1593.78005818525 1593.77842490379 19.897 3 -0.8813473447037998 0.2719491762077632 1.0 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM'] 73574 13791 MVTWDTGSL True PC9_epitope_Rep2 1008.45863252216 1008.45752993586 58.331 2 -0.8813798317388652 0.27196570933917874 1.0 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE'] 136169 19214 WRRRPRTRR True NCI_RA007_Epitope_Rep3 1338.7969860924197 1338.79588993586 83.879 2 -0.8813839953749505 0.27196570933917874 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 105648 13351 SSEEDYGEFEF True H1975_Epitope_Rep2 1337.4935569470497 1337.4924499358601 56.487 2 -0.8813939268772711 0.27196570933917874 1.0 ['CON__Q28107'] 79731 4245 PDYEPKPTQ True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 21.439 2 -0.8814363484285578 0.271989835809226 1.0 ['ENSG00000101842|ENST00000217957|VSIG1', 'nc|ENSG00000101842|Q86XK7-2|VSIG1'] 13373 13213 DLWWTVPT True PC9_epitope_Rep5 1016.4967322830399 1016.49562993586 55.831 2 -0.8815032617269978 0.27202032753012134 1.0 ['ATP13A5|p.G500W|1|0.09|ENSG00000187527|chr3:193327021-193327021|C/A|missense_variant'] 121314 12762 VETWPWQV True PC9_epitope_Rep2 1043.50763131991 1043.50652993586 54.395 2 -0.8815085008369751 0.27202032753012134 1.0 ['ENSG00000013583|ENST00000014930|HEBP1'] 29930 16069 FVYGEPREL True PC9_epitope_Rep6 1108.5553097883198 1108.5542099358602 74.136 2 -0.8815162845210547 0.27202032753012134 1.0 ['ENSG00000046774|ENST00000247452|MAGEC2'] 82518 23910 PPRRGGVLLG True NCI_RA007_Epitope_Rep4 1020.6192474575597 1020.61867496793 103.7 1 -0.8815587231546189 0.2720444518903222 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 112934 11299 TLLILFLKIIF True H1975_Epitope_Rep2 1332.8784818319998 1332.87682490379 48.508 3 -0.8816406699907059 0.27207873795895576 1.0 ['ENST00000591247.5_1_17:42113248-42113383:-|nuORF'] 47167 14975 ITWMNVEIV True PC9_epitope_Rep2 1103.5685173243098 1103.56740993586 62.858 2 -0.8816485628029375 0.27207873795895576 1.0 ['ENST00000276654.9_1_8:105510067-105510277:-|nuORF'] 72750 2734 MNMKKSHEVQA True PC9_epitope_Rep5 1301.62202653249 1301.62039490379 15.054 3 -0.881711539046393 0.2720952633562743 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 36327 7166 GVELRQQQLED True H1975_Epitope_Rep3 1313.6575430107298 1313.65644993586 32.538 2 -0.8817130666438867 0.2720952633562743 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 94723 8102 RSEQVLGSWP True H1975_Epitope_Rep1 1157.58292151849 1157.58182993586 36.111 2 -0.8817205291542343 0.2720952633562743 1.0 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF'] 85531 9925 QGARCGGK True H1975_Epitope_Rep3 775.3759059577098 775.3753549679301 43.209 1 -0.8817636553067217 0.2721333445012145 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4', 'nc|ENSG00000113742|Q17RY0-3|CPEB4', 'nc|ENSG00000137449|Q7Z5Q1-7|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-5|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-4|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-6|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-3|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-8|CPEB2', 'ENSG00000137449|ENST00000538197|CPEB2'] 137156 16083 YAVLHWLG True PC9_epitope_Rep4 957.50723739709 957.50614993586 69.797 2 -0.8817959402786573 0.2721536657546485 1.0 ['OR2B11|p.F108L|1|0.24|ENSG00000177535|chr1:247451659-247451659|G/T|missense_variant'] 62309 18875 LLGARQMGVP True PC9_epitope_Rep1 1040.5800850675198 1040.5789899358601 77.387 2 -0.8818034591297725 0.2721536657546485 1.0 ['ENST00000560192.5_1_15:91447248-91454469:+|nuORF'] 4228 8241 AIDFSRQEWE True PC9_epitope_Rep4 1279.58331544131 1279.5816749037901 39.16 3 -0.8818755805528634 0.272154990717865 1.0 ['ENSG00000189144|ENST00000536220|ZNF573'] 63190 20570 LLRTIDELV True PC9_epitope_Rep2 1070.63356010902 1070.6324699358602 84.557 2 -0.8818828632725969 0.272154990717865 1.0 ['ENSG00000135605|ENST00000381501|TEC', 'TEC|p.C625F|1|0.07|ENSG00000135605|chr4:48137438-48137438|C/A|missense_variant'] 7301 24204 ARHRPFNIRL True PC9_epitope_Rep1 1278.7421565548998 1278.74104993586 97.916 2 -0.8818894934080255 0.272154990717865 1.0 ['ENST00000446158.5_1_X:48380534-48380582:+|nuORF'] 31799 6164 GEIFQQHIQ True NCI_RA007_Epitope_Rep3 1098.54580773378 1098.54470993586 31.245 2 -0.8819324427424688 0.272154990717865 1.0 ['CLCA2|p.D489E|1|0.37|ENSG00000137975|chr1:86441522-86441522|C/A|missense_variant'] 30083 8979 FYIYRLYWWEF True H1975_Epitope_Rep1 1684.8078360728798 1684.8067299358602 39.442 2 -0.8819533150341807 0.272154990717865 1.0 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 22812 5325 EVAAVAVLMC True PC9_epitope_Rep4 1004.5034745395999 1004.50236993586 27.198 2 -0.8819752897631647 0.272154990717865 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 37745 6927 GWVEMEMIWKY True H1975_Epitope_Rep3 1470.6675797425796 1470.66592490379 31.605 3 -0.8819817061713203 0.272154990717865 1.0 ['ENST00000372634.1_2_X:102631969-102632642:+|nuORF', 'ENST00000372635.1_2_X:102631496-102632642:+|nuORF'] 94437 19934 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 82.659 2 -0.8819911092339074 0.2721575524104626 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 138646 22196 YIGLPGLFGLP True PC9_epitope_Rep3 1145.6484818971699 1145.64738993586 90.663 2 -0.8820046792874477 0.2721575524104626 1.0 ['ENSG00000196739|ENST00000356083|COL27A1'] 82784 4708 PRPIQDILT True NCI_RA007_Epitope_Rep3 1051.6025943339098 1051.6014899358602 25.466 2 -0.8820107602892415 0.2721575524104626 1.0 ['nc|ENSG00000164691|Q8N103-4|TAGAP', 'ENSG00000164691|ENST00000367066|TAGAP'] 65693 7395 LSASGRPVVDP True NCI_RA007_Epitope_Rep2 1096.58767254576 1096.58656993586 33.39 2 -0.8820926766173607 0.272177869584636 1.0 ['ENST00000466352.5_3_1:2066409-2066779:+|nuORF'] 137923 7731 YFCPFLAY True H1975_Epitope_Rep3 1022.4571759701798 1022.45606993586 34.72 2 -0.8821124533714796 0.272177869584636 1.0 ['ENST00000373670.5_1_9:125659820-125659901:-|nuORF'] 25964 11466 FGAGLGGNVK True PC9_epitope_Rep6 918.49231560894 918.49120993586 55.17 2 -0.8821320633664005 0.2721880277463747 1.0 ['ENSG00000262152|ENST00000573315|GREP1'] 55405 8622 LAETRELVA True H1975_Epitope_Rep3 1000.5553097883198 1000.55420993586 38.158 2 -0.8821749873186865 0.27221214235868807 1.0 ['ENSG00000105723|ENST00000222330|GSK3A'] 27515 13186 FMPSPTFSEL True PC9_epitope_Rep1 1154.53179746242 1154.5307099358602 55.584 2 -0.8821959748018187 0.2722222997585519 1.0 ['PEG3|p.G1199Vfs*8|1|0.27|ENSG00000198300|chr19:56814846-56814846|C/-|frameshift_variant', 'nc|ENSG00000198300|Q9GZU2-2|PEG3', 'nc|ENSG00000198300|Q9GZU2-4|PEG3', 'ENSG00000198300|ENST00000326441|PEG3', 'PEG3|p.Y757Mfs*26|1|0.16|ENSG00000198300|chr19:56816174-56816174|G/-|frameshift_variant'] 56637 9302 LDIGFGRGQE True PC9_epitope_Rep3 1090.54072235334 1090.5396299358601 40.72 2 -0.882298525225233 0.2722603695640038 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 18292 14818 EIRPVDFKQRN True H1975_Epitope_Rep1 1400.7524464550797 1400.7513499358602 62.227 2 -0.8823628796250655 0.27227052600728513 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-2|ZZEF1', 'ENST00000572426.5_1_17:3937307-3974023:-|nuORF'] 100775 6406 SLEECYMAKI True NCI_RA007_Epitope_Rep1 1185.54098224713 1185.5398899358602 28.943 2 -0.8824097010187553 0.2722806821670807 1.0 ['ENSG00000150768|ENST00000280346|DLAT', 'ENST00000533297.1_1_11:111896132-111933256:+|nuORF'] 126611 18368 VLMIRMLR True NCI_RA007_Epitope_Rep4 1030.61436240126 1030.6132699358602 79.462 2 -0.8824205858343476 0.2723047938036425 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 22622 9825 ETLTNLRKGYL True H1975_Epitope_Rep3 1306.7245003717399 1306.7234099358602 42.818 2 -0.8824265853899775 0.2723073487956683 1.0 ['nc|ENSG00000074696|Q9P035-2|HACD3', 'ENSG00000074696|ENST00000261875|HACD3'] 48913 7162 KEDQTEYLEER True H1975_Epitope_Rep3 1438.65760258038 1438.6565099358602 32.523 2 -0.8824291632335791 0.2723073487956683 1.0 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 76428 11555 NQELLSMGRR True NCI_RA007_Epitope_Rep5 1202.61898975738 1202.6184749679298 51.096 1 -0.8824512504384422 0.2723073487956683 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3', 'nc|ENSG00000113971|Q7Z494-5|NPHP3', 'nc|ENSG00000113971|Q7Z494-7|NPHP3', 'nc|ENSG00000113971|Q7Z494-4|NPHP3'] 83351 8867 PTFIKVRVVKD True H1975_Epitope_Rep3 1300.7867067054797 1300.78560993586 39.109 2 -0.8824799054803836 0.2723175037329575 1.0 ['ENSG00000155761|ENST00000336338|SPAG17'] 36719 18270 GVIYRLLYQRD True NCI_RA007_Epitope_Rep2 1394.7670338900598 1394.7653849037902 75.824 3 -0.8825301182138883 0.2723378127572878 1.0 ['ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 41866 7396 IAYYDHVAV True PC9_epitope_Rep5 1049.51819600361 1049.5170899358602 33.406 2 -0.8825384042032383 0.2723378127572878 1.0 ['ENSG00000258839|ENST00000555147|MC1R'] 25138 23065 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 100.16 2 -0.8825828521954321 0.27235812064803316 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 80736 10130 PHEPTMKMRH True PC9_epitope_Rep2 1262.6012315182602 1262.59957490379 44.303 3 -0.8825963006412155 0.27235812064803316 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B'] 25031 16740 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 69.24 2 -0.8826413314502124 0.2723784274052885 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25139 23175 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 100.59 2 -0.8826559132404387 0.2723784274052885 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 85624 16903 QGKKITEQM True PC9_epitope_Rep5 1061.55392988933 1061.55282993586 70.032 2 -0.8827126218203505 0.27241648759523346 1.0 ['ENST00000274026.9_1_4:122737724-122737820:-|nuORF'] 121690 4866 VFLCKLFPF True H1975_Epitope_Rep3 1112.60925993748 1112.6081699358601 23.843 2 -0.8827410006555989 0.2724266398760936 1.0 ['ENSG00000151617|ENST00000651419|EDNRA', 'nc|ENSG00000151617|P25101-3|EDNRA'] 33001 5394 GIGHVAGF True NCI_RA007_Epitope_Rep5 756.3918732916799 756.39076993586 27.438 2 -0.8827480372560197 0.27243679187363956 1.0 ['ENST00000489430.1_1_1:228296601-228296928:-|nuORF'] 49455 10091 KEYGHYSSP True PC9_epitope_Rep1 1066.47197408718 1066.47086993586 43.687 2 -0.8827589917523875 0.2724608966219704 1.0 ['nc|ENSG00000215695|Q92681|RSC1A1'] 63496 17289 LLWYKRTRVKR True PC9_epitope_Rep4 1517.9306856005699 1517.9290349037901 74.506 3 -0.8827878674662247 0.27247104785823917 1.0 ['ENST00000473125.5_1_15:34697252-34699017:-|nuORF'] 96915 8437 SAVNTTLYSVR True NCI_RA007_Epitope_Rep5 1209.63535101417 1209.63424993586 39.133 2 -0.8828398614996145 0.2725053019310191 1.0 ['TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 25032 17097 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 70.635 2 -0.8828783550729667 0.2725053019310191 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 71834 13708 MELFELPAT True PC9_epitope_Rep4 1049.5103337418498 1049.50922993586 60.615 2 -0.8828931342127161 0.27250784792465993 1.0 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3'] 64559 9532 LPSDSLVPPP True H1975_Epitope_Rep3 1020.54916177872 1020.54806993586 41.672 2 -0.8829326362900161 0.27250784792465993 1.0 ['ENST00000579186.1_1_17:30368040-30368955:+|nuORF'] 71411 14994 LYSTWIGGSI True PC9_epitope_Rep4 1095.5600608155898 1095.5589699358602 65.613 2 -0.8829327803724718 0.27250784792465993 1.0 ['ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104240622-104242055:-|nuORF', 'ENSG00000115073|ENST00000289228|ACTR1B'] 140472 21267 YRIHRRGPKI True NCI_RA007_Epitope_Rep5 1294.7734566831798 1294.77181490379 88.848 3 -0.882992573214978 0.2725420985811348 1.0 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 24977 17461 FDDGDCCD True H1975_Epitope_Rep2 888.226583982 888.22548993586 72.456 2 -0.8829990689883597 0.2725420985811348 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140651 26089 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 105.61 2 -0.8830216465952491 0.2725623962387868 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 25033 17315 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 71.484 2 -0.8830226081595033 0.2725623962387868 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 3308 10117 AGGDWGLVVV True H1975_Epitope_Rep2 971.5076313199098 971.50652993586 43.911 2 -0.8830459737023342 0.272577653179352 1.0 ['ENST00000361846.7_1_1:113161547-113161652:-|nuORF'] 31535 4139 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 21.043 2 -0.8830540730270094 0.272577653179352 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 23964 20698 EYLRSYFI True PC9_epitope_Rep2 1089.54949613189 1089.54838993586 85.051 2 -0.8830700513578771 0.272577653179352 1.0 ['ENSG00000169860|ENST00000305097|P2RY1'] 136387 10347 WTQMWNRPCR True PC9_epitope_Rep2 1376.623029592 1376.6219299358602 45.125 2 -0.8830781440882922 0.272577653179352 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 139036 27893 YLAIVLLEL True H1975_Epitope_Rep2 1045.64233388757 1045.64122993586 116.08 2 -0.8830897873414743 0.272577653179352 1.0 ['nc|ENSG00000173218|Q8TAA9-2|VANGL1', 'ENSG00000173218|ENST00000355485|VANGL1'] 140652 26202 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 106.13 2 -0.883109999486885 0.272577653179352 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 10616 4206 CNLFCFWSKKY True NCI_RA007_Epitope_Rep1 1437.6573494120498 1437.65569490379 20.461 3 -0.8831249710371063 0.272577653179352 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12'] 92220 24209 RLIMKRVLMH True PC9_epitope_Rep1 1295.76823727371 1295.76712993586 97.935 2 -0.8831254366231203 0.272577653179352 1.0 ['ENST00000356321.4_1_15:35274023-35274074:-|nuORF'] 31536 4238 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 21.419 2 -0.8831345285979316 0.272577653179352 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 95341 21200 RVRVKGGG True PC9_epitope_Rep4 827.5089687325898 827.50786993586 89.71 2 -0.883152325739953 0.272577653179352 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 139037 27989 YLAIVLLEL True H1975_Epitope_Rep2 1045.64233388757 1045.64122993586 116.59 2 -0.8831764411390403 0.272577653179352 1.0 ['nc|ENSG00000173218|Q8TAA9-2|VANGL1', 'ENSG00000173218|ENST00000355485|VANGL1'] 53947 4102 KTTRHMEMGVK True NCI_RA007_Epitope_Rep2 1316.66931107808 1316.6682099358602 20.595 2 -0.8832076572985338 0.272577653179352 1.0 ['ENST00000440884.7_1_14:103852397-103871488:+|nuORF'] 25034 17607 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 72.623 2 -0.8832161349740674 0.272577653179352 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 94445 20762 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 85.971 2 -0.8832386410867391 0.272577653179352 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 65241 13649 LQSLQSELQFK True NCI_RA007_Epitope_Rep2 1319.7085159544297 1319.7074099358601 57.733 2 -0.8832411673799409 0.272577653179352 1.0 ['nc|ENSG00000164053|Q8WXE1-5|ATRIP', 'nc|ENSG00000164053|Q8WXE1-3|ATRIP', 'nc|ENSG00000164053|Q8WXE1-2|ATRIP', 'ENSG00000164053|ENST00000320211|ATRIP', 'ATRIP|p.T523Sfs*9|1|0.08|ENSG00000164053|chr3:48460621-48460622|-/G|frameshift_variant', 'ATRIP|p.M541Ifs*26|1|0.24|ENSG00000164053|chr3:48460676-48460677|-/A|frameshift_variant'] 96825 6131 SARTQRGGR True H1975_Epitope_Rep2 987.5322233583099 987.53112993586 28.56 2 -0.8832461967362797 0.272577653179352 1.0 ['ENST00000374597.3_3_X:67913533-67935165:+|nuORF'] 132772 17622 VVITTLTTL True NCI_RA007_Epitope_Rep1 959.59029831471 959.58920993586 72.682 2 -0.8832530446868571 0.272577653179352 1.0 ['HTR1E|p.I128Lfs*14|1|0.13|ENSG00000168830|chr6:87015716-87015716|A/-|frameshift_variant', 'ENSG00000168830|ENST00000305344|HTR1E'] 25035 17703 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 72.998 2 -0.8832798510016897 0.272577653179352 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 72346 8904 MIRGCGGG True NCI_RA007_Epitope_Rep3 749.3312642644099 749.33016993586 42.109 2 -0.8833137556709173 0.2725839969874057 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 132773 17718 VVITTLTTL True NCI_RA007_Epitope_Rep1 959.59029831471 959.58920993586 73.057 2 -0.8833167607144792 0.2725839969874057 1.0 ['HTR1E|p.I128Lfs*14|1|0.13|ENSG00000168830|chr6:87015716-87015716|A/-|frameshift_variant', 'ENSG00000168830|ENST00000305344|HTR1E'] 58028 9025 LEHSHPKRP True H1975_Epitope_Rep3 1099.58867560527 1099.58756993586 39.709 2 -0.8833795298873148 0.2726042872484345 1.0 ['ENST00000375754.8_1_9:93657936-93658308:+|nuORF'] 69759 17207 LVFRHAQDL True H1975_Epitope_Rep1 1097.5981776598098 1097.5970899358601 71.643 2 -0.8833923472332534 0.2726042872484345 1.0 ['ENSG00000168490|ENST00000454243|PHYHIP'] 85098 12331 QELAKRINQE True NCI_RA007_Epitope_Rep2 1227.6571490879098 1227.6560499358602 52.569 2 -0.8834039548188052 0.2726106299596949 1.0 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENST00000543813.1_1_15:101717595-101728206:-|nuORF'] 52691 12387 KLWRPTVGER True H1975_Epitope_Rep1 1240.7040397106798 1240.70294993586 52.679 2 -0.883437852306256 0.2726106299596949 1.0 ['ENSG00000153292|ENST00000371253|ADGRF1'] 45988 10349 ISFDQFGSP True H1975_Epitope_Rep1 996.4552613938799 996.45416993586 44.755 2 -0.8834431585211496 0.2726207742943211 1.0 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 119600 9501 VATTLQYV True PC9_epitope_Rep5 893.48583324617 893.48472993586 41.502 2 -0.8834983156798796 0.27264486437486923 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant'] 123953 10791 VGRVKCYKYW True NCI_RA007_Epitope_Rep5 1300.6750480815197 1300.67394993586 48.142 2 -0.8836375296481918 0.27266515124046464 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 36354 20401 GVESVTVY True PC9_epitope_Rep3 852.4228986364399 852.42180993586 83.724 2 -0.8836681581620955 0.27266515124046464 1.0 ['CLSTN3|p.I753V|1|0.36|ENSG00000139182|chr12:7150555-7150555|A/G|missense_variant'] 112859 16207 TLKFVVVI True H1975_Epitope_Rep2 917.5949897723299 917.59388993586 67.55 2 -0.8837260319441781 0.2726740294511379 1.0 ['ENSG00000173535|ENST00000356864|TNFRSF10C'] 117418 11122 TVPSWVLS True NCI_RA007_Epitope_Rep5 887.47526856247 887.47416993586 49.417 2 -0.8837897684660654 0.2726740294511379 1.0 ['nc|ENSG00000274576|P01814|IGHV2-70', 'nc|ENSG00000211974|A0A0C4DH43|IGHV2-70D'] 100459 10737 SLAIDKLKP True PC9_epitope_Rep2 983.60153170475 983.60042993586 46.619 2 -0.8837956447530838 0.2726740294511379 1.0 ['ENST00000409301.5_1_7:32584308-32588465:+|nuORF'] 138715 22713 YIPPQVFYNG True PC9_epitope_Rep4 1196.5866099165999 1196.58550993586 95.591 2 -0.8838008573623669 0.2726740294511379 1.0 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000486102.5_1_3:49728598-49742525:+|nuORF', 'ENST00000487805.6_1_3:49737640-49742607:+|nuORF'] 81585 16080 PLKPWPPEF True NCI_RA007_Epitope_Rep1 1109.59096702105 1109.5898699358602 66.651 2 -0.8838148764999905 0.2726740294511379 1.0 ['ENST00000458235.5_2_19:17937194-17937548:-|nuORF'] 66557 15140 LSIEDPVDAI True PC9_epitope_Rep3 1070.54955570154 1070.5484499358602 63.374 2 -0.8838977845174996 0.2727082578018239 1.0 ['RGS6|p.E80D|1|0.11|ENSG00000182732|chr14:72458275-72458275|A/C|missense_variant'] 22803 5490 EVAAVAVLMC True PC9_epitope_Rep2 1004.5034745395999 1004.50236993586 26.511 2 -0.883913626537044 0.2727082578018239 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 101952 6155 SLQEASSFFQR True H1975_Epitope_Rep3 1298.6255146064598 1298.62387490379 28.688 3 -0.8839241887234459 0.27271459646382956 1.0 ['ENST00000536668.2_1_12:10999664-11034822:-|nuORF', 'ENSG00000111215|ENST00000228811|PRR4'] 1066 4218 AEAGSKKVAK True NCI_RA007_Epitope_Rep4 987.5712942056299 987.57018993586 22.536 2 -0.8839590609257887 0.27271459646382956 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 47046 9511 ITRSERYVCAV True H1975_Epitope_Rep1 1295.6656055966303 1295.66450993586 41.505 2 -0.8839683448815844 0.27272473750993487 1.0 ['ENST00000596477.1_1_19:50059010-50060533:-|nuORF', 'ENSG00000142546|ENST00000596358|NOSIP'] 126787 7115 VLPLPMLP True H1975_Epitope_Rep3 878.52994698762 878.52884993586 32.338 2 -0.8840320111535824 0.27274121583937533 1.0 ['ENST00000525451.6_2_11:65622395-65622491:-|nuORF'] 80300 25110 PGFIPNKG True PC9_epitope_Rep3 828.4493881678 828.44828993586 101.93 2 -0.8840457834195873 0.27274121583937533 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 39888 8755 HPERLKEYILY True PC9_epitope_Rep1 1459.7823496010299 1459.78069490379 38.515 3 -0.8840505609981788 0.27274121583937533 1.0 ['ENST00000295598.9_1_1:116947247-116947373:+|nuORF'] 56608 20392 LDHSRFVNCVR True PC9_epitope_Rep1 1344.6720879594002 1344.67098993586 83.259 2 -0.8840705299131404 0.2727652988664408 1.0 ['ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 59219 11141 LFEHNCNT True PC9_epitope_Rep1 976.4072656556401 976.40616993586 47.738 2 -0.8840811707978652 0.27277543849864755 1.0 ['ENSG00000100418|ENST00000263256|DESI1', 'ENST00000463886.1_1_22:41998573-42000148:-|nuORF', 'ENST00000482612.1_1_22:41999261-42000085:-|nuORF'] 60015 18188 LGKHPAKFSL True PC9_epitope_Rep2 1096.6393141958 1096.63820993586 75.268 2 -0.8841603185043136 0.272799520377006 1.0 ['nc|ENSG00000102024|P13797-2|PLS3', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 56080 7351 LATLLNTEVS True NCI_RA007_Epitope_Rep2 1059.58119018299 1059.58008993586 33.216 2 -0.8841945765273852 0.27281852528266115 1.0 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 26686 20275 FITSDSLTGIP True PC9_epitope_Rep1 1149.59175486669 1149.59064993586 82.815 2 -0.8842045906618863 0.27281852528266115 1.0 ['ENST00000514075.2_1_4:8176279-8176723:+|nuORF'] 25040 19145 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 78.614 2 -0.8842340622313586 0.27281852528266115 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 136388 10440 WTQMWNRPCR True PC9_epitope_Rep2 1376.623029592 1376.6219299358602 45.478 2 -0.8842426805250188 0.27281852528266115 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 56702 11731 LDKYMSQFPK True H1975_Epitope_Rep1 1255.6270948295899 1255.6259899358602 50.115 2 -0.8842614945278127 0.27281852528266115 1.0 ['ENSG00000136542|ENST00000259056|GALNT5'] 43137 12264 IFDFKNSL True PC9_epitope_Rep3 982.5123823471799 982.51128993586 52.201 2 -0.8842796313343678 0.27281852528266115 1.0 ['DOCK7|p.L198F|1|0.4|ENSG00000116641|chr1:62648244-62648244|C/G|missense_variant'] 98512 9014 SFLPSPSPQP True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 39.624 2 -0.8843131469001477 0.27282485954468777 1.0 ['ENSG00000099917|ENST00000263205|MED15', 'ENST00000489651.5_1_22:20929276-20940988:+|nuORF', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15', 'ENST00000493216.1_1_22:20937040-20937274:+|nuORF', 'ENST00000473244.5_1_22:20936789-20940988:+|nuORF', 'ENST00000492381.5_1_22:20909161-20940988:+|nuORF'] 91238 9420 RGGGGGGC True H1975_Epitope_Rep2 619.2496428154301 619.2490949679301 41.202 1 -0.8843208415606857 0.27282485954468777 1.0 ['ENST00000301785.5_1_11:62482560-62482752:-|nuORF'] 15106 3817 DYVYWTDWQRR True NCI_RA007_Epitope_Rep2 1586.7266256300597 1586.72497490379 19.481 3 -0.8843393582362806 0.2728489377125969 1.0 ['ENSG00000070018|ENST00000261349|LRP6'] 104594 25314 SQRKWKKQKI True PC9_epitope_Rep3 1328.80408810512 1328.80298993586 102.79 2 -0.8843591511140435 0.2728590746239527 1.0 ['ENST00000589346.1_1_18:13666456-13666642:-|nuORF'] 136678 20368 WWWIWWQWWKL True PC9_epitope_Rep5 1802.8874238062597 1802.88577490379 83.38 3 -0.8843793783189132 0.27289328779535793 1.0 ['chr12:54282841-54283827|531|24.4|0.0|21.22|+|1|HNRNPA1,HNRNPA1|1'] 60142 6250 LGNASIPE True PC9_epitope_Rep1 799.40758292547 799.40648993586 28.854 2 -0.8844086282315224 0.27289328779535793 1.0 ['ENST00000199764.6_1_19:42259386-42260556:+|nuORF'] 128657 16710 VPVHKPGC True PC9_epitope_Rep1 835.4374435851098 835.43634993586 69.103 2 -0.8844285701452135 0.2728996194432441 1.0 ['TMEM131|p.S1574C|1|0.61|ENSG00000075568|chr2:97766117-97766117|T/A|missense_variant'] 52634 5180 KLQKWKDFQR True PC9_epitope_Rep5 1375.77245362367 1375.7707949037901 24.943 3 -0.8844389529212799 0.2728996194432441 1.0 ['ENST00000494347.5_1_10:103546197-103546269:-|nuORF'] 135832 8869 WNSSFLEQL True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 39.468 2 -0.8844616767508396 0.27290975494159303 1.0 ['nc|nan|Q96LP6-2|C12orf42', 'ENSG00000179088|ENST00000548883|C12orf42'] 42384 12678 IEDDLCGLFCS True PC9_epitope_Rep1 1213.49951135797 1213.49840993586 53.637 2 -0.8845619163742542 0.27297184276554226 1.0 ['ENSG00000178177|ENST00000635767|LCORL'] 20940 6612 EQNWRQHREAY True NCI_RA007_Epitope_Rep1 1515.69672248411 1515.69508490379 29.732 3 -0.8845784298705043 0.27297184276554226 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 388 6457 AALDETPVAGP True NCI_RA007_Epitope_Rep4 1039.5185899264297 1039.51748993586 31.435 2 -0.8846061774439188 0.27299211061860557 1.0 ['ENSG00000185085|ENST00000330574|INTS5', 'INTS5|p.E601Nfs*21|1|0.24|ENSG00000185085|chr11:62648279-62648279|C/-|frameshift_variant'] 140650 24670 YRSVLIRH True NCI_RA007_Epitope_Rep2 1042.60359739342 1042.60250993586 103.71 2 -0.8846323030649352 0.27299211061860557 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 55515 5045 LAGNNFSP True NCI_RA007_Epitope_Rep1 818.3922672145 818.39116993586 23.708 2 -0.8846423215020577 0.2729984388938448 1.0 ['ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-13|MUC4', 'nc|ENSG00000145113|Q99102-12|MUC4', 'ENST00000464234.5_1_3:195474049-195480138:-|nuORF'] 25324 9515 FDSSYGEHPKR True NCI_RA007_Epitope_Rep1 1321.6051135150499 1321.6040099358602 41.005 2 -0.884692892731378 0.2729984388938448 1.0 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 67722 12671 LSWRWRSGQSP True H1975_Epitope_Rep3 1358.68436689526 1358.6832699358602 53.949 2 -0.8847413605190214 0.27301870487553315 1.0 ['ENST00000427063.6_1_10:29710617-29711127:+|nuORF'] 57896 7399 LEFWASSVEEE True H1975_Epitope_Rep1 1324.5823123818002 1324.5812099358602 33.465 2 -0.8847615920669868 0.27301870487553315 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 117947 4398 TWYQHQPA True PC9_epitope_Rep2 1029.4668291370897 1029.46572993586 22.267 2 -0.8847764958832995 0.273027553622946 1.0 ['ENST00000426683.5_1_4:89514469-89527042:+|nuORF', 'ENST00000452979.5_1_4:89514620-89527042:+|nuORF'] 100100 13423 SISGTNGQLL True PC9_epitope_Rep5 988.5189242796 988.51782993586 56.647 2 -0.8848176444352389 0.273027553622946 1.0 ['ENST00000381813.4_1_2:10197463-10197871:-|nuORF'] 109246 4489 TASFTQKL True NCI_RA007_Epitope_Rep4 894.4810822188998 894.47998993586 23.651 2 -0.8848634450621599 0.273027553622946 1.0 ['ENST00000373883.3_1_2:220408769-220409425:+|nuORF', 'ENST00000421791.1_3_2:220408769-220409493:+|nuORF', 'ENST00000344458.6_1_2:220408458-220409493:+|nuORF'] 130579 22443 VSRVSRTL True PC9_epitope_Rep2 916.54541381096 916.54430993586 91.815 2 -0.8848719779317953 0.273027553622946 1.0 ['ENST00000528173.5_1_11:46390827-46391010:+|nuORF'] 46723 5355 ITEETTLQ True NCI_RA007_Epitope_Rep4 933.46549172441 933.46438993586 27.165 2 -0.8848763395967169 0.273027553622946 1.0 ['ENSG00000124383|ENST00000244230|MPHOSPH10'] 141185 5055 YSVGSESDSSK True NCI_RA007_Epitope_Rep4 1144.48841199696 1144.48675490379 25.942 3 -0.8849454220666677 0.2730680788795206 1.0 ['ENSG00000162105|ENST00000601538|SHANK2'] 14603 12942 DTYQKRLRFYW True H1975_Epitope_Rep1 1574.7993966474999 1574.79828993586 54.856 2 -0.8849528783111377 0.2730680788795206 1.0 ['ENSG00000117215|ENST00000375105|PLA2G2D'] 11596 21011 DGFFAVKHAR True H1975_Epitope_Rep2 1146.5934266325396 1146.59179490379 86.972 3 -0.8849549284348027 0.2730680788795206 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5', 'ADAMTS5|p.G894Vfs*16|1|0.13|ENSG00000154736|chr21:26924165-26924165|C/-|frameshift_variant', 'ADAMTS5|p.A277Rfs*16|1|0.22|ENSG00000154736|chr21:26965563-26965563|C/-|frameshift_variant'] 82520 24924 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 103.37 1 -0.8850441215451218 0.2730680788795206 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 66985 8936 LSPGFWELP True PC9_epitope_Rep5 1044.52803241132 1044.5269299358602 39.317 2 -0.8850734657072986 0.27307692307692305 1.0 ['ENST00000382363.7_1_22:30775209-30775263:-|nuORF'] 101701 9321 SLMLELSP True NCI_RA007_Epitope_Rep1 888.4626552734401 888.46154993586 40.251 2 -0.8851049816510366 0.27307692307692305 1.0 ['ENST00000358597.7_2_11:47490324-47493758:-|nuORF', 'ENST00000395290.6_1_11:47490324-47490525:-|nuORF'] 55460 24487 LAFYRLHLRL True H1975_Epitope_Rep3 1300.77681072812 1300.77570993586 101.92 2 -0.8851075120943672 0.27307692307692305 1.0 ['CHAT|p.R548L|1|0.15|ENSG00000070748|chr10:49655103-49655103|G/T|missense_variant'] 79085 6824 PALLSTC[Carbamidomethyl]GFC True NCI_RA007_Epitope_Rep1 1067.4779883471801 1067.47688993586 30.55 2 -0.8851171083329199 0.27307692307692305 1.0 ['ENST00000216211.8_1_22:45689086-45691455:+|nuORF'] 113255 18753 TLRFAEFEDFP True PC9_epitope_Rep1 1370.6506667251397 1370.6495699358602 76.921 2 -0.8851693895065842 0.27307692307692305 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000468018.5_1_2:242577129-242590612:+|nuORF', 'ENST00000494465.5_1_2:242577129-242592771:+|nuORF', 'ENST00000430617.6_3_2:242577147-242592771:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 25049 20602 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 84.361 2 -0.8852105315933435 0.27308705285600815 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 142396 16146 YYERRWEQSLR True NCI_RA007_Epitope_Rep2 1584.7797238320798 1584.7786299358602 67.53 2 -0.8852516869629372 0.2730895713728332 1.0 ['ENSG00000167113|ENST00000300452|COQ4', 'nc|ENSG00000167113|Q9Y3A0-2|COQ4'] 138005 20903 YFSVAHFS True NCI_RA007_Epitope_Rep5 956.43921740692 956.43812993586 87.4 2 -0.8852581920640571 0.2730895713728332 1.0 ['ENST00000216024.6_1_22:38964257-38966082:-|nuORF'] 14606 3876 DTYWYHDEKLL True NCI_RA007_Epitope_Rep1 1481.68269512941 1481.68105490379 19.096 3 -0.8852649013578292 0.2730895713728332 1.0 ['nc|ENSG00000160856|Q96P31-4|FCRL3', 'ENST00000480682.5_1_1:157667440-157670285:-|nuORF', 'nc|ENSG00000160856|Q96P31-5|FCRL3', 'ENST00000494724.5_1_1:157667081-157670285:-|nuORF', 'nc|ENSG00000160856|Q96P31-2|FCRL3', 'nc|ENSG00000160856|Q96P31-7|FCRL3', 'ENSG00000160856|ENST00000368184|FCRL3', 'nc|ENSG00000160856|Q96P31-3|FCRL3', 'nc|ENSG00000160856|Q96P31-6|FCRL3'] 97369 7360 SEDLQVVAH True H1975_Epitope_Rep2 996.48762415132 996.48652993586 33.251 2 -0.8853141095653919 0.27311363478018535 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A', 'nc|ENSG00000159398|Q6NT32-3|CES5A', 'CES5A|p.K267N|1|0.2|ENSG00000159398|chr16:55863357-55863357|C/A|missense_variant'] 67446 9098 LSSQIRAGLRY True PC9_epitope_Rep2 1262.7095190139398 1262.70787490379 40.337 3 -0.8853424654898395 0.27311995764069835 1.0 ['ENST00000367558.5_1_1:182572378-182573464:-|nuORF'] 80261 4478 PGCCGCCGSC True PC9_epitope_Rep6 888.20567202208 888.20456993586 24.421 2 -0.8853565682212692 0.27311995764069835 1.0 ['ENSG00000186860|ENST00000334202|KRTAP17-1'] 70659 19670 LWHIWRERN True PC9_epitope_Rep3 1308.68397297244 1308.68233490379 80.894 3 -0.885378675511636 0.27312628014881074 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 140654 26202 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 106.13 2 -0.8853875182806317 0.27312628014881074 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 41081 20935 HTPRRWSW True PC9_epitope_Rep1 1124.5627952106 1124.5616899358602 85.348 2 -0.8854849004657915 0.27316801337419894 1.0 ['nc|ENSG00000211699|P03979|TRGV3', 'nc|ENSG00000211697|A0A0B4J1U4|TRGV5'] 118825 11222 VAALAAWL True PC9_epitope_Rep1 813.47487463965 813.47376993586 48.046 2 -0.8855137367180579 0.27316801337419894 1.0 ['ENSG00000135116|ENST00000257572|HRK'] 141850 9326 YVDIAIPC[Carbamidomethyl]NNK True H1975_Epitope_Rep1 1305.63872242188 1305.63762993586 40.779 2 -0.885528907680112 0.27316801337419894 1.0 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF', 'ENST00000467439.1_1_4:81082717-81082801:+|nuORF', 'ENST00000416785.1_1_6:28699967-28700618:+|nuORF'] 133142 22022 VVQSVKHTKR True PC9_epitope_Rep4 1180.70403971068 1180.70294993586 92.93 2 -0.8855475515611642 0.27316801337419894 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 25051 21164 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 86.595 2 -0.8855901092085644 0.27316801337419894 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 94775 9983 RSLSWSVAL True NCI_RA007_Epitope_Rep4 1017.5607295219299 1017.55962993586 45.243 2 -0.8856054822136488 0.27316801337419894 1.0 ['ENST00000394818.7_1_11:61919466-61919706:+|nuORF'] 33647 5428 GLGLRTESA True NCI_RA007_Epitope_Rep3 902.48214484806 902.48104993586 28.363 2 -0.885617524044529 0.27316801337419894 1.0 ['APOPT1-MARK3|2|fusion', 'APOPT1-MARK3|4|fusion', 'APOPT1-MARK3|1|fusion', 'APOPT1-MARK3|3|fusion'] 94449 21109 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 87.373 2 -0.8856211560278276 0.27316801337419894 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 101970 5559 SLQGWNLV True NCI_RA007_Epitope_Rep4 915.48141657207 915.48030993586 27.983 2 -0.8856221942400254 0.27316801337419894 1.0 ['ENSG00000136928|ENST00000259455|GABBR2'] 44662 6802 ILSQYITFVK True H1975_Epitope_Rep3 1210.6961603655798 1210.6950699358601 31.117 2 -0.8856316687032124 0.27316801337419894 1.0 ['ENSG00000143179|ENST00000367879|UCK2', 'ENST00000463772.5_1_1:165867222-165877057:+|nuORF', 'ENST00000479872.5_1_1:165872390-165877057:+|nuORF', 'nc|ENSG00000143179|Q9BZX2-2|UCK2'] 25052 21248 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 86.937 2 -0.8856482182257558 0.27316801337419894 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 17077 13369 EGILRELKEVA True NCI_RA007_Epitope_Rep2 1255.71360133487 1255.71250993586 56.642 2 -0.8856711090176909 0.27319207032501636 1.0 ['ENSG00000205363|ENST00000569673|INSYN1'] 131344 7679 VTGNVPLK True NCI_RA007_Epitope_Rep1 826.4912529797799 826.49014993586 33.862 2 -0.8857297792752261 0.2732161266055557 1.0 ['ENSG00000169551|ENST00000276241|CT55', 'nc|ENSG00000169551|Q8WUE5-2|CT55'] 13204 6752 DLSEYRQIL True NCI_RA007_Epitope_Rep3 1135.5873381925899 1135.58569490379 33.65 3 -0.885792976982443 0.27325411309084324 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 121502 7183 VEYRLVQS True PC9_epitope_Rep3 992.5290950404799 992.52798993586 32.642 2 -0.8858861489625772 0.27327306411845825 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 25057 21678 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 88.721 2 -0.8859513366078302 0.27327306411845825 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 65691 19476 LSASFQLSV True PC9_epitope_Rep2 950.50729696674 950.50618993586 80.294 2 -0.8859739335826613 0.27327306411845825 1.0 ['nc|nan|A6NN90|C2orf81', 'ENSG00000284308|ENST00000684111|C2orf81'] 38117 9298 HCCRGTWWR True PC9_epitope_Rep1 1203.5178362474699 1203.5167299358602 40.619 2 -0.8860067619804015 0.27327306411845825 1.0 ['ENST00000480550.1_1_20:19998040-20007434:+|nuORF'] 80157 19328 PFSLKTIE True PC9_epitope_Rep6 933.5171333744499 933.51602993586 86.994 2 -0.8860499241728655 0.27327306411845825 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 79086 6696 PALLSTC[Carbamidomethyl]GFC True NCI_RA007_Epitope_Rep2 1067.4779883471801 1067.47688993586 30.658 2 -0.8860533086138349 0.27327306411845825 1.0 ['ENST00000216211.8_1_22:45689086-45691455:+|nuORF'] 136034 7007 WRDEKERHRDR True PC9_epitope_Rep3 1581.7872688240097 1581.78562490379 31.965 3 -0.8861317802835864 0.2733110461067001 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 116584 12303 TVAAFLKG True NCI_RA007_Epitope_Rep2 805.46978925921 805.46868993586 52.459 2 -0.8861342734746228 0.2733135542462357 1.0 ['ENST00000269383.7_1_17:73886551-73886722:-|nuORF'] 112969 8627 TLLQPPRQPL True PC9_epitope_Rep1 1161.6869926642098 1161.6853349037901 38.022 3 -0.8861667846322184 0.2733135542462357 1.0 ['ENST00000438146.6_2_22:36156004-36156064:-|nuORF'] 12903 16530 DLKELIPEFYY True PC9_epitope_Rep2 1428.7176836557999 1428.7160249037902 68.822 3 -0.8862026064229751 0.2733135542462357 1.0 ['NBEA|p.V2431L|1|0.47|ENSG00000172915|chr13:35593442-35593442|G/T|missense_variant'] 139369 25384 YLLVKITRLG True PC9_epitope_Rep5 1174.74377926434 1174.7426899358602 102.86 2 -0.886319322569151 0.27332367607320945 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 112560 10717 TLEGRSEEL True PC9_epitope_Rep2 1032.50875351872 1032.5076499358602 46.539 2 -0.8863630027998509 0.2733895118044432 1.0 ['ENST00000460788.5_1_2:241655965-241656310:-|nuORF'] 35083 9893 GQVLLRAQL True NCI_RA007_Epitope_Rep5 996.6080140675199 996.60690993586 44.696 2 -0.8863718937684235 0.27339963229149256 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 123183 21459 VGLAVFLIYKF True PC9_epitope_Rep2 1268.7532813188798 1268.75218993586 88.015 2 -0.8863937856257085 0.2734059444552773 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 52769 13730 KNKEQVRH True PC9_epitope_Rep2 1037.57302554113 1037.57192993586 58.101 2 -0.8864050436683937 0.2734059444552773 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 58844 15399 LESTFKDPR True PC9_epitope_Rep1 1091.56112344475 1091.56002993586 64.051 2 -0.8864258499072714 0.273416064290589 1.0 ['ENSG00000115421|ENST00000238714|PAPOLG', 'ENST00000453839.5_1_2:61014200-61024278:+|nuORF'] 127981 8862 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 44.021 2 -0.8864484710897521 0.2734223757329285 1.0 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 136255 20512 WRWREWRPWVT True NCI_RA007_Epitope_Rep2 1656.84259887216 1656.8415099358601 84.859 2 -0.8864487178682176 0.2734223757329285 1.0 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF'] 122507 18852 VGELYLRWK True PC9_epitope_Rep5 1162.6498788795 1162.6482449037899 77.532 3 -0.886485946108271 0.27345273243830426 1.0 ['SLC7A6|p.Q408E|1|0.16|ENSG00000103064|chr16:68296466-68296466|C/G|missense_variant'] 45732 23913 IRWFWAAVER True PC9_epitope_Rep3 1332.7091250911196 1332.7074749037902 97.268 3 -0.886495578948778 0.27345273243830426 1.0 ['ENSG00000138411|ENST00000644978|HECW2', 'ENSG00000002746|ENST00000395891|HECW1', 'nc|ENSG00000002746|Q76N89-2|HECW1'] 55420 22657 LAEYLKYRQFP True PC9_epitope_Rep3 1426.7608858804597 1426.75978993586 92.423 2 -0.8864957040500794 0.27345273243830426 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 105665 4663 SSEIDVQEPN True NCI_RA007_Epitope_Rep4 1116.4934973774 1116.49240993586 24.359 2 -0.8865769260479475 0.2734907039899728 1.0 ['nc|ENSG00000047634|Q9UN30-2|SCML1'] 26016 14228 FGGEYFKEE True NCI_RA007_Epitope_Rep4 1104.4763907612798 1104.47528993586 62.008 2 -0.8866039264340815 0.27350082165835726 1.0 ['ENSG00000124608|ENST00000244571|AARS2', 'AARS2|p.H263Mfs*47|1|0.16|ENSG00000124608|chr6:44310407-44310407|C/-|frameshift_variant'] 22821 5105 EVAAVAVLMC True PC9_epitope_Rep6 1004.5034745395999 1004.50236993586 27.318 2 -0.8866291124204339 0.27353117297274715 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 30205 4493 FYRTYMLFK True NCI_RA007_Epitope_Rep4 1267.6423509709095 1267.64071490379 23.668 3 -0.8866591463563332 0.27353117297274715 1.0 ['nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3', 'ENSG00000139508|ENST00000266943|SLC46A3', 'nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3'] 47616 11961 IVWSEHSRD True PC9_epitope_Rep3 1127.53597132607 1127.53432490379 51.032 3 -0.8866836070937149 0.27353117297274715 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 72921 6006 MPWFFLWHLKK True NCI_RA007_Epitope_Rep5 1531.8162330119496 1531.81459490379 29.786 3 -0.8867152377002112 0.27355521515109316 1.0 ['ENST00000342922.8_1_11:47290950-47291097:+|nuORF'] 130633 12916 VSSVSLPSP True PC9_epitope_Rep5 871.46509780159 871.46454496793 54.693 1 -0.8867741674912949 0.2735615217512393 1.0 ['ZMYM4|p.A664Ffs*28|1|0.06|ENSG00000146463|chr1:35387155-35387156|-/TTTCCTAGACAATATTGTTTAGT|frameshift_variant'] 91282 9238 RGLVGYRGT True PC9_epitope_Rep1 977.54066278369 977.53956993586 40.386 2 -0.8867807232195661 0.2735615217512393 1.0 ['ENST00000507944.5_1_3:98241389-98241692:-|nuORF'] 139370 25573 YLLVKITRLG True PC9_epitope_Rep5 1174.74377926434 1174.7426899358602 103.67 2 -0.8868175404282134 0.2735640186590545 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 20518 7737 EPPAPVRLRK True PC9_epitope_Rep1 1161.69822605425 1161.6965849037902 34.581 3 -0.8868465568274002 0.2735640186590545 1.0 ['ENSG00000275074|ENST00000611621|NUDT18'] 27402 12321 FLWHCIIL True PC9_epitope_Rep3 1043.5626440982298 1043.56154993586 52.42 2 -0.8868528380341438 0.2735640186590545 1.0 ['ENST00000415076.6_1_7:43648087-43648366:-|nuORF'] 80302 18757 PGFPPTPAWIL True PC9_epitope_Rep6 1194.6437308698999 1194.6420749037902 84.789 3 -0.8868694740276006 0.27357413389773866 1.0 ['ENST00000339876.10_1_1:204987617-204987836:+|nuORF'] 36977 23904 GVMVRKKSLF True PC9_epitope_Rep2 1163.68488448923 1163.68437496793 97.424 1 -0.8869138526176452 0.27361209741426123 1.0 ['ENST00000519072.5_1_8:42251729-42254267:+|nuORF'] 88523 18555 QTADEEEDQPL True PC9_epitope_Rep5 1273.5310050849298 1273.5293549037901 76.394 3 -0.8869170246121176 0.27361840181567554 1.0 ['ENSG00000155886|ENST00000341998|SLC24A2', 'nc|ENSG00000155886|Q9UI40-2|SLC24A2'] 48670 17101 KAVARPELL True PC9_epitope_Rep4 995.6127650947898 995.61166993586 73.784 2 -0.8869284971243456 0.27361840181567554 1.0 ['nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 19759 10697 ELSCTRGGCL True PC9_epitope_Rep1 1037.46340063277 1037.46230993586 46.036 2 -0.8869477672893601 0.2736285157337789 1.0 ['ENSG00000160999|ENST00000444095|SH2B2', 'nc|ENSG00000160999|O14492-2|SH2B2'] 5117 9949 ALLLEQASPP True NCI_RA007_Epitope_Rep5 1037.5757108797297 1037.57460993586 44.91 2 -0.8869558954280041 0.273637312913331 1.0 ['ENST00000503007.5_1_5:79364367-79378199:-|nuORF'] 70603 25103 LWHIWRERN True H1975_Epitope_Rep3 1308.68397297244 1308.68233490379 104.43 3 -0.8869894659699767 0.273637312913331 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 67571 22507 LSTVHKELSST True PC9_epitope_Rep4 1200.635016661 1200.6333749037901 94.803 3 -0.8869933862538826 0.273637312913331 1.0 ['ENST00000472469.5_2_3:58870372-59035390:-|nuORF', 'ENSG00000163689|ENST00000482387|CFAP20DC'] 139367 24994 YLLVKITRLG True NCI_RA007_Epitope_Rep5 1174.74377926434 1174.7426899358602 103.64 2 -0.8869936125225015 0.273637312913331 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 72366 16244 MIVFSVWEG True PC9_epitope_Rep5 1066.5157534754599 1066.51464993586 67.472 2 -0.8869965318273493 0.273637312913331 1.0 ['ENST00000564656.5_1_16:28835949-28836952:+|nuORF'] 56590 17386 LDHIIESVP True PC9_epitope_Rep3 1021.5444107514501 1021.54330993586 72.045 2 -0.8870881518789754 0.27367527079330606 1.0 ['POLL|p.S329I|1|0.2|ENSG00000166169|chr10:101583587-101583587|C/A|missense_variant'] 70642 26531 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 109.68 3 -0.8871499068756291 0.27369930527517505 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 140653 26803 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 109.02 2 -0.8871651103950647 0.27370179590700267 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 141184 4742 YSVGSESDSSK True NCI_RA007_Epitope_Rep3 1144.48841199696 1144.48675490379 25.605 3 -0.8871813827402839 0.27370179590700267 1.0 ['ENSG00000162105|ENST00000601538|SHANK2'] 92240 18519 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 81.036 2 -0.8871816821037232 0.27370179590700267 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 66023 8421 LSEELAIQLD True PC9_epitope_Rep3 1129.5866694862498 1129.5855699358601 37.356 2 -0.8871850417015851 0.273704286330795 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 44113 5679 IINWCQHWFEY True NCI_RA007_Epitope_Rep1 1537.6812556607701 1537.67959490379 26.149 3 -0.8871924672670713 0.273704286330795 1.0 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 78529 19305 NYPPQYLILKL True PC9_epitope_Rep6 1360.77547331544 1360.77436993586 86.905 2 -0.8871945468900865 0.273704286330795 1.0 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 100947 21570 SLFIHAGA True NCI_RA007_Epitope_Rep5 814.43373810366 814.43264993586 90.056 2 -0.8872230971061462 0.27371439708216166 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644', 'ZNF644|p.Q91L|1|0.2|ENSG00000122482|chr1:90941082-90941082|T/A|missense_variant', 'ZNF644|p.I882Mfs*40|1|0.08|ENSG00000122482|chr1:90938654-90938708|CTGACCTTCCACTTTGCTCTTAAATAAAGGGAATAAATTTACATGCTCTTGATTA/-|frameshift_variant'] 102677 18223 SLYMDRIFFV True PC9_epitope_Rep1 1289.6478302741698 1289.64619490379 74.886 3 -0.8872712203589607 0.2737384283427299 1.0 ['ENST00000389682.7_1_2:122523087-122523240:+|nuORF'] 126610 18987 VLMIRMLR True NCI_RA007_Epitope_Rep2 1030.61436240126 1030.6132699358602 78.707 2 -0.8873383566350848 0.2737763795311543 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 58806 13383 LESMAVINEF True H1975_Epitope_Rep2 1151.55326118299 1151.55216993586 56.612 2 -0.8874032283557317 0.2738206266791019 1.0 ['ENST00000588072.5_1_18:11906296-11908403:-|nuORF'] 37282 14488 GVRTARWR True NCI_RA007_Epitope_Rep3 1000.56788059104 1000.56678993586 64.295 2 -0.8874251930945245 0.2738206266791019 1.0 ['ENST00000586590.5_2_19:11456273-11456894:-|nuORF', 'ENST00000394705.2_1_2:54081954-54087114:-|nuORF'] 55237 13749 LADFPKELS True PC9_epitope_Rep2 1018.53351171458 1018.53240993586 58.172 2 -0.8874317667249156 0.2738206266791019 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'CATSPERG|p.I517M|1|0.07|ENSG00000099338|chr19:38359524-38359524|C/G|missense_variant'] 60153 14960 LGNLTLAP True PC9_epitope_Rep1 797.4647038787699 797.46360993586 62.365 2 -0.8874376909424753 0.27382692334460823 1.0 ['ENST00000436103.1_22:24376175-24376421:-|nuORF'] 45205 23688 IPRRPREVP True PC9_epitope_Rep1 1118.6672602791398 1118.6661699358601 95.909 2 -0.8874550350419166 0.27382692334460823 1.0 ['TRIOBP|p.G181V|1|0.15|ENSG00000100106|chr22:37715848-37715848|G/T|missense_variant'] 58248 8679 LELNETQVKIW True NCI_RA007_Epitope_Rep2 1371.73981608271 1371.73816490379 38.405 3 -0.8874799842246425 0.2738370312630495 1.0 ['ENSG00000120094|ENST00000239174|HOXB1'] 17879 6441 EHVQHRRH True H1975_Epitope_Rep2 1097.55910681249 1097.5580099358601 29.695 2 -0.8875132120551766 0.27383951562391257 1.0 ['ENST00000393054.5_1_7:138434015-138440506:-|nuORF'] 81747 8137 PLPFFCFP True H1975_Epitope_Rep3 966.4673467310598 966.46624993586 36.276 2 -0.8875146605162204 0.27383951562391257 1.0 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|88', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|88'] 112240 7286 TKQIICRY True H1975_Epitope_Rep3 1023.55353596651 1023.55242993586 33.001 2 -0.8875196133641118 0.27383951562391257 1.0 ['ENSG00000179455|ENST00000314520|MKRN3', 'MKRN3|p.H106L|1|0.54|ENSG00000179455|chr15:23566099-23566099|A/T|missense_variant', 'MKRN3|p.P161Rfs*10|1|0.33|ENSG00000179455|chr15:23566258-23566258|C/-|frameshift_variant'] 89996 4737 RDLQSENPEW True NCI_RA007_Epitope_Rep2 1272.5734790336 1272.57184490379 23.056 3 -0.8876080057751666 0.27391159113684443 1.0 ['nc|ENSG00000178199|A2A288-3|ZC3H12D', 'nc|ENSG00000178199|A2A288-4|ZC3H12D', 'ENSG00000178199|ENST00000409806|ZC3H12D'] 25065 23824 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 98.512 2 -0.8876149196116919 0.27391159113684443 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 104824 18399 SRAFGGKG True H1975_Epitope_Rep3 778.4085859849798 778.40748993586 77.13 2 -0.8876295949743853 0.27391159113684443 1.0 ['nc|ENSG00000145730|P19021-6|PAM'] 47139 11191 ITVLNISEIES True NCI_RA007_Epitope_Rep3 1216.6550833992399 1216.6539899358602 51.128 2 -0.887704437773737 0.2739356149702849 1.0 ['ENSG00000115594|ENST00000410023|IL1R1'] 17128 5047 EGMTPLHWAAF True NCI_RA007_Epitope_Rep2 1258.5804789903398 1258.57938993586 24.256 2 -0.8877162224812906 0.2739430543572045 1.0 ['ENSG00000164512|ENST00000341048|ANKRD55'] 12582 11192 DKYQPLSL True PC9_epitope_Rep1 962.5072969667399 962.50618993586 47.932 2 -0.8877242766647987 0.2739430543572045 1.0 ['ENSG00000204311|ENST00000644580|PJVK', 'ENST00000437056.5_1_2:179318136-179318400:+|nuORF'] 112347 16726 TLAEWWELLFF True NCI_RA007_Epitope_Rep2 1453.7281887698498 1453.72708993586 69.792 2 -0.8877338885813304 0.2739430543572045 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 44709 16414 ILVHGDDFSV True PC9_epitope_Rep1 1100.55022440788 1100.54912993586 67.959 2 -0.8877359710014004 0.2739430543572045 1.0 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-3|SVEP1'] 25061 23427 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 96.488 2 -0.8877784417638428 0.2739430543572045 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 103202 10723 SPIRFYLGP True H1975_Epitope_Rep1 1048.5705659296398 1048.56946993586 46.207 2 -0.8878231533577501 0.2739430543572045 1.0 ['ENST00000394947.7_1_15:75663751-75664036:-|nuORF'] 57210 14141 LDVSLSATG True PC9_epitope_Rep5 861.44436235701 861.44326993586 59.404 2 -0.8878286213616551 0.2739430543572045 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-4|INPP5F'] 75194 9805 NIDHLHVGSYQ True H1975_Epitope_Rep2 1281.61019889549 1281.60910993586 42.701 2 -0.8878328747853176 0.2739430543572045 1.0 ['EIF3H|p.W119S|1|0.5|ENSG00000147677|chr8:116658914-116658914|C/G|missense_variant'] 131717 19905 VTPAPHEPV True PC9_epitope_Rep5 945.49198125577 945.49088993586 81.619 2 -0.8878511442506335 0.2739430543572045 1.0 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'nc|ENSG00000102858|O60291-4|MGRN1', 'nc|ENSG00000102858|O60291|MGRN1'] 57279 20568 LDYRTYTMR True PC9_epitope_Rep2 1217.58629264677 1217.5846349037902 84.55 3 -0.8878893669092535 0.27396326189813525 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'PLXNA4|p.G1706Afs*40|1|0.25|ENSG00000221866|chr7:132145227-132145227|C/-|frameshift_variant', 'PLXNA4|p.A1683Pfs*63|1|0.33|ENSG00000221866|chr7:132146518-132146518|C/-|frameshift_variant'] 37022 16221 GVPAWPRLRL True PC9_epitope_Rep5 1163.6927467509897 1163.69110490379 67.386 3 -0.8879283974430618 0.27396326189813525 1.0 ['ENST00000361658.6_1_17:19687046-19689386:-|nuORF'] 110024 5043 TEKGRSPTP True H1975_Epitope_Rep3 971.5036085686298 971.50250993586 24.518 2 -0.8879449651633166 0.2739733652467959 1.0 ['CFHR3|p.W134R|1|0.19|ENSG00000116785|chr1:196779943-196779943|T/A|missense_variant'] 125397 7679 VISHLIDN True PC9_epitope_Rep1 909.49198125577 909.49088993586 34.359 2 -0.8879725024591758 0.273983468314269 1.0 ['nc|ENSG00000114805|Q4KWH8-2|PLCH1', 'ENSG00000114805|ENST00000460012|PLCH1', 'nc|ENSG00000114805|Q4KWH8|PLCH1'] 36236 16235 GVDFEGTF True PC9_epitope_Rep3 870.37594844402 870.37484993586 67.585 2 -0.887997391059457 0.2739935711005664 1.0 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 3586 4480 AGNGELCIKVP True NCI_RA007_Epitope_Rep5 1099.5695799534699 1099.56848993586 23.883 2 -0.8880618071389262 0.2739960482008182 1.0 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.S811Tfs*2|1|0.35|ENSG00000064313|chr8:119762511-119762541|TTATCCAAAGTTCTAACTTCATTATTCACAC/-|frameshift_variant'] 68941 17653 LTPDSRAVKP True H1975_Epitope_Rep2 1082.6084079903399 1082.60730993586 73.222 2 -0.8880626548502895 0.2739960482008182 1.0 ['ENST00000533627.5_1_11:118404537-118405292:+|nuORF', 'nc|ENSG00000149582|Q86YD3-3|TMEM25', 'nc|ENSG00000149582|Q86YD3-2|TMEM25', 'nc|ENSG00000149582|Q86YD3-4|TMEM25', 'ENSG00000149582|ENST00000313236|TMEM25'] 84917 7379 QEDREPAGRSK True NCI_RA007_Epitope_Rep1 1271.6218262083496 1271.62072993586 32.697 2 -0.8880793316097404 0.2739960482008182 1.0 ['PBXIP1|p.W517S|1|0.17|ENSG00000163346|chr1:154946124-154946124|C/G|missense_variant'] 3657 11743 AGPTAHELAV True PC9_epitope_Rep1 964.4977949121999 964.49668993586 50.043 2 -0.888097500547949 0.27400615024976693 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 117130 8505 TVKLPVDK True NCI_RA007_Epitope_Rep1 898.5487678558999 898.54766993586 37.082 2 -0.8881585630862273 0.27402635350429255 1.0 ['ENSG00000130988|ENST00000397180|RGN', 'nc|ENSG00000130988|Q15493-2|RGN'] 118760 21418 VAAAAATTTA True PC9_epitope_Rep4 846.4446967101801 846.44358993586 90.562 2 -0.8881628557599716 0.27402635350429255 1.0 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 27266 19878 FLQARTPTL True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 81.28 2 -0.888227217202772 0.27403645470989285 1.0 ['ENSG00000132688|ENST00000368223|NES'] 55804 14171 LANVAYQSL True PC9_epitope_Rep4 977.51819600361 977.51708993586 62.413 2 -0.888243749690407 0.2740465556344005 1.0 ['ENSG00000166866|ENST00000300119|MYO1A'] 89825 21851 RAPDAVYTE True H1975_Epitope_Rep2 1020.48762415132 1020.48652993586 90.36 2 -0.888252816325718 0.27405665627782727 1.0 ['ENSG00000089327|ENST00000392219|FXYD5'] 76072 25917 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 109.44 3 -0.8883263017753609 0.2740591304347826 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 18154 12714 EIKEEIAS True H1975_Epitope_Rep2 917.4705771048499 917.46948993586 54.005 2 -0.888332008650581 0.2740591304347826 1.0 ['ENSG00000104324|ENST00000220763|CPQ'] 99506 20927 SIDLPRRKKP True PC9_epitope_Rep2 1208.73533983896 1208.7342499358601 85.943 2 -0.8883500972085441 0.2740591304347826 1.0 ['ENSG00000135913|ENST00000258399|USP37', 'nc|ENSG00000135913|Q86T82-2|USP37'] 135531 23848 WKLCLKKKK True NCI_RA007_Epitope_Rep3 1173.74200544253 1173.7403549037901 103.33 3 -0.8883931887288107 0.27408942931077657 1.0 ['nc|ENSG00000134744|Q5TAX3-2|TUT4'] 12293 11178 DIMKYLFMLLS True H1975_Epitope_Rep3 1372.7134673058397 1372.7123699358601 48.094 2 -0.8884009554460152 0.27408942931077657 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 10416 9372 CHDGDETI True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 42.69 2 -0.8884086276995391 0.27408942931077657 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 133143 22227 VVQSVKHTKR True PC9_epitope_Rep6 1180.70403971068 1180.70294993586 98.453 2 -0.8884333812697185 0.27409571508069003 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 13385 7355 DLYEYKYCTDV True NCI_RA007_Epitope_Rep4 1410.6013335742198 1410.6002299358602 34.931 2 -0.8885106228051992 0.27409571508069003 1.0 ['ENSG00000011114|ENST00000334746|BTBD7', 'nc|ENSG00000011114|Q9P203-3|BTBD7'] 94720 6307 RSEAGAWRL True NCI_RA007_Epitope_Rep5 1044.54647644012 1044.5453699358602 30.938 2 -0.8885592673432469 0.27411591218942155 1.0 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 11300 6644 DEIRKEFCGP True PC9_epitope_Rep5 1192.55465816532 1192.5535699358602 30.529 2 -0.8886263426444659 0.27411591218942155 1.0 ['ENSG00000242732|ENST00000609883|RTL5'] 47853 14765 IYHREEKRWRW True H1975_Epitope_Rep1 1657.8589772122898 1657.8578899358602 62.018 2 -0.8886590102816531 0.27412601032232936 1.0 ['CLEC5A|p.F148Lfs*19|1|0.17|ENSG00000258227|chr7:141931728-141931728|G/-|frameshift_variant', 'nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 25119 2342 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 13.168 2 -0.8887039061771209 0.2741361081742808 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 63811 9504 LNHNIPKGP True PC9_epitope_Rep1 988.5454138109599 988.54430993586 41.413 2 -0.8887162471439874 0.2741462057452876 1.0 ['ENSG00000204311|ENST00000644580|PJVK'] 29890 12185 FVVEDHILH True PC9_epitope_Rep6 1107.57129420563 1107.57018993586 58.23 2 -0.8888798169646627 0.2741980357788721 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6', 'ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 60151 11834 LGNIYHTGF True PC9_epitope_Rep4 1020.5028802926399 1020.50178993586 53.291 2 -0.8889223156373874 0.2742081322074923 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 29239 18620 FTVQSVMLH True PC9_epitope_Rep1 1060.5375515491999 1060.5364499358602 76.41 2 -0.8890099972929855 0.2742485151131574 1.0 ['ENST00000585105.5_1_17:73482215-73489290:+|nuORF', 'ENST00000581085.5_1_17:73467944-73489290:+|nuORF', 'ENSG00000177728|ENST00000314256|TMEM94', 'nc|ENSG00000177728|Q12767-3|TMEM94', 'nc|ENSG00000177728|Q12767-2|TMEM94'] 131537 16931 VTKVSNVYSQT True NCI_RA007_Epitope_Rep1 1224.635016661 1224.6339099358602 69.985 2 -0.889065708188739 0.2742485151131574 1.0 ['ENSG00000165379|ENST00000298119|LRFN5'] 10419 6042 CHEFLRGNP True PC9_epitope_Rep1 1071.4919983391098 1071.4909099358601 28.054 2 -0.8890822333016841 0.2742485151131574 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 67186 11038 LSRCAKCL True PC9_epitope_Rep2 892.4622784339599 892.46118993586 47.777 2 -0.8890822463759497 0.2742485151131574 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'nc|ENSG00000138759|Q86XX4-5|FRAS1', 'nc|ENSG00000138759|Q86XX4-4|FRAS1', 'nc|ENSG00000138759|Q86XX4-6|FRAS1'] 56338 11261 LDDAVNPLHEN True PC9_epitope_Rep1 1235.57823006087 1235.57712993586 48.194 2 -0.8891472622395123 0.27427251989094753 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 132349 5307 VVAAEMGKFMK True NCI_RA007_Epitope_Rep3 1209.6249866546098 1209.6233549037902 27.884 3 -0.8891643919193216 0.2742888935252799 1.0 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF'] 142247 8673 YWRHQLQQRRK True NCI_RA007_Epitope_Rep1 1597.87021060233 1597.86856490379 37.738 3 -0.8891770675492224 0.2742888935252799 1.0 ['nc|ENSG00000125741|Q9H6K4-2|OPA3'] 10617 7320 CNLPEHWT True PC9_epitope_Rep1 998.4280011002201 998.42690993586 32.969 2 -0.889185692355237 0.2742888935252799 1.0 ['nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 26348 15152 FHSDPQHWL True PC9_epitope_Rep5 1165.53049202281 1165.52938993586 63.289 2 -0.8892183247028455 0.2742989874262824 1.0 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 42296 14279 IDVTKSYYQK True H1975_Epitope_Rep3 1243.64485306871 1243.6437499358601 60.267 2 -0.8892361480380899 0.2743101913662661 1.0 ['ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'ENSG00000166847|ENST00000300087|DCTN5'] 96670 6629 SAKDAHVLPP True H1975_Epitope_Rep3 1033.55564414149 1033.5545499358602 30.452 2 -0.8892621793694606 0.2743101913662661 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 25118 2282 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 12.834 2 -0.8892674943703708 0.2743101913662661 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 127270 9579 VLYSVEEQR True PC9_epitope_Rep5 1121.57168812845 1121.5705899358602 41.807 2 -0.8892690076895122 0.2743101913662661 1.0 ['nc|ENSG00000125746|O95834-2|EML2', 'nc|ENSG00000125746|O95834-3|EML2', 'ENST00000587804.1_1_19:46136252-46137743:-|nuORF', 'ENST00000588000.5_1_19:46124203-46142634:-|nuORF', 'ENSG00000125746|ENST00000245925|EML2'] 138084 10195 YGGEAEER True PC9_epitope_Rep3 909.38282472961 909.38172993586 44.168 2 -0.8892850314778609 0.2743101913662661 1.0 ['ENSG00000174429|ENST00000311955|ABRA'] 9211 4331 AVNAEWYSK True NCI_RA007_Epitope_Rep2 1066.5083595959002 1066.5072699358602 21.484 2 -0.889333114602251 0.2743101913662661 1.0 ['ENST00000321250.12_1_8:29963396-29963519:+|nuORF'] 119533 4997 VASKTGFG True NCI_RA007_Epitope_Rep5 765.4021036222099 765.40100993586 25.925 2 -0.8893473239438812 0.2743101913662661 1.0 ['CON__Q3TTY5'] 25062 23563 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 97.16 2 -0.889355553599009 0.2743101913662661 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 11225 20699 DEDSPVLIQDQ True H1975_Epitope_Rep1 1257.57247597409 1257.57136993586 86.038 2 -0.889410514585079 0.2743442828136734 1.0 ['ENST00000456064.1_1_20:10594086-10594842:-|nuORF'] 87144 10225 QPEKYTSRFYL True H1975_Epitope_Rep3 1430.7194149912998 1430.7183099358601 44.378 2 -0.8894192196692035 0.2743442828136734 1.0 ['KCTD8|p.P403Hfs*32|2|0.2|ENSG00000183783|chr4:44175004-44175004|G/-|frameshift_variant', 'KCTD8|p.K428Rfs*7|1|0.19|ENSG00000183783|chr4:44174934-44174934|G/-|frameshift_variant', 'ENSG00000183783|ENST00000360029|KCTD8'] 50085 12757 KKHAGKGG True PC9_epitope_Rep5 781.4558705305699 781.45476993586 54.077 2 -0.88943405356381 0.274350559047672 1.0 ['nc|ENSG00000188517|Q9BXS0-3|COL25A1', 'nc|ENSG00000188517|Q9BXS0-2|COL25A1', 'chr4:108824227-108827135|137|19.13|0.87|4.45|-|ENST00000399127|COL25A1,COL25A1', 'ENSG00000188517|ENST00000399132|COL25A1'] 6082 5910 APLPHPGAA True PC9_epitope_Rep5 829.44463714053 829.44354993586 27.726 2 -0.8894674465989004 0.274350559047672 1.0 ['nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 36550 16776 GVGVRWRQQ True PC9_epitope_Rep5 1084.5890099584399 1084.5879099358601 69.536 2 -0.8895048754995183 0.27438464747601166 1.0 ['ENST00000546514.1_1_12:50561052-50561130:-|nuORF'] 68668 24013 LTIYKDEL True PC9_epitope_Rep3 993.53826274185 993.53716993586 97.652 2 -0.889529558462141 0.27438464747601166 1.0 ['SLC22A11|p.A453D|1|0.15|ENSG00000168065|chr11:64568754-64568754|C/A|missense_variant'] 3383 3230 AGHQAMHYSRP True NCI_RA007_Epitope_Rep2 1253.57237391813 1253.57126993586 17.22 2 -0.8895328687739685 0.27439473793995356 1.0 ['nc|ENSG00000112425|O95278-5|EPM2A'] 142947 22884 YYYYHYCYAWL True PC9_epitope_Rep3 1606.65912323386 1606.6580299358602 93.289 2 -0.8895535651692749 0.2744187340082323 1.0 ['ENST00000360409.7_1_2:206547248-206547725:+|nuORF'] 81008 16298 PILAASPAA True PC9_epitope_Rep2 809.4647038787699 809.46360993586 67.935 2 -0.8895700335921941 0.27442882371754757 1.0 ['ENST00000374748.5_1_10:35360216-35378901:-|nuORF'] 45104 19383 IPLIERLQRN True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74426490379 81.443 3 -0.8896479283556297 0.274438913146258 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 37271 22202 GVRRSFRK True PC9_epitope_Rep3 1004.5991807193199 1004.59808993586 90.687 2 -0.8896521240936344 0.2744490022943753 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 31086 17979 GAVDALAAALA True PC9_epitope_Rep5 941.5181960036099 941.51708993586 74.174 2 -0.8897004787673316 0.2745008064964681 1.0 ['ENSG00000107625|ENST00000373585|DDX50'] 58008 17537 LEHITHSLL True PC9_epitope_Rep3 1061.5869442697701 1061.58584993586 72.641 2 -0.8897253622054544 0.2745247994215554 1.0 ['nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'ENST00000496420.5_1_7:92136298-92136457:-|nuORF'] 63141 3406 LLRLALLALKV True PC9_epitope_Rep5 1221.85366406649 1221.85201490379 18.17 3 -0.8897333897758568 0.27453488695458717 1.0 ['ENSG00000198677|ENST00000358746|SKIC3'] 48824 9619 KDSNPMVICQL True H1975_Epitope_Rep1 1246.6049794860198 1246.60333490379 41.925 3 -0.8897884450671936 0.2745588787385809 1.0 ['ENST00000538944.1_1_11:68512411-68514777:-|nuORF', 'nc|ENSG00000132749|Q9Y4I5-3|TESMIN', 'nc|ENSG00000132749|Q9Y4I5-2|TESMIN', 'ENSG00000132749|ENST00000255087|TESMIN'] 120693 7372 VEKDPSRL True PC9_epitope_Rep5 942.51344497634 942.51234993586 33.313 2 -0.8898216198212198 0.27456896551724136 1.0 ['ENSG00000171115|ENST00000307271|GIMAP8'] 10574 9823 CMSLHGGIDQY True H1975_Epitope_Rep2 1222.51107910118 1222.5105749679299 42.768 1 -0.889881598157046 0.274571134651208 1.0 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 16643 6575 EEQIARKEEEL True H1975_Epitope_Rep3 1372.6834234053997 1372.68178490379 30.246 3 -0.8898915119748866 0.274571134651208 1.0 ['ENSG00000118898|ENST00000345988|PPL'] 94752 14337 RSIRKKRSP True NCI_RA007_Epitope_Rep4 1126.70470841702 1126.7036099358602 62.452 2 -0.8899081940607451 0.274571134651208 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 83905 16845 PVPTLWNEPAE True NCI_RA007_Epitope_Rep2 1251.6135529404298 1251.6129749679299 70.258 1 -0.8899159355125623 0.274571134651208 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 16240 11821 EEERRYYEEER True H1975_Epitope_Rep3 1586.69611334742 1586.69500993586 50.614 2 -0.8899322903904691 0.274571134651208 1.0 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 5352 16221 ALRRLEERRRE True H1975_Epitope_Rep3 1482.84914080458 1482.8480499358602 67.851 2 -0.889942494469007 0.274571134651208 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 87849 16378 QRGQGRGP True NCI_RA007_Epitope_Rep1 854.4470967520198 854.44598993586 67.82 2 -0.8899668594605646 0.274571134651208 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 25815 10269 FFDIQLPYEL True NCI_RA007_Epitope_Rep5 1283.64379043955 1283.64214490379 46.13 3 -0.8899775177682867 0.274571134651208 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 57743 12761 LEENKVKVLHN True NCI_RA007_Epitope_Rep2 1321.73539940861 1321.7343099358602 54.255 2 -0.889979474062326 0.274571134651208 1.0 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1', 'ENST00000514499.1_1_4:153804397-153831368:+|nuORF'] 92549 27142 RMKKKKKLLPF True PC9_epitope_Rep3 1415.91628140639 1415.91463490379 111.67 3 -0.8899836095541674 0.274571134651208 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 76069 25529 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 107.25 3 -0.8899900157750623 0.274571134651208 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 111755 7395 TIILLWALYYD True H1975_Epitope_Rep3 1382.74858986126 1382.7474899358601 33.423 2 -0.8900062600932659 0.274571134651208 1.0 ['TSPAN12|p.T243I|1|0.52|ENSG00000106025|chr7:120788782-120788782|G/A|missense_variant'] 83821 18544 PVLPAHLL True PC9_epitope_Rep5 858.53272386894 858.53162993586 76.353 2 -0.8900348060427045 0.274571134651208 1.0 ['ENST00000442440.1_1_20:23337408-23337708:-|nuORF'] 16241 11916 EEERRYYEEER True H1975_Epitope_Rep3 1586.69611334742 1586.69500993586 50.988 2 -0.8900385920986684 0.274571134651208 1.0 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 25070 27141 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 112.84 2 -0.8900493815950781 0.2745774021352313 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 124370 22705 VGTYWKRLM True PC9_epitope_Rep6 1152.6113851958 1152.61087496793 100.4 1 -0.8900615105988784 0.2745774021352313 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 16721 13816 EESKEPVADE True NCI_RA007_Epitope_Rep1 1131.4931630242297 1131.4925749679298 57.758 1 -0.8901261210483858 0.2746291894296398 1.0 ['ENSG00000074201|ENST00000525428|CLNS1A'] 92555 25184 RMKKKKKLLPF True PC9_epitope_Rep6 1415.91628140639 1415.91463490379 112.06 3 -0.8901582317422713 0.27464935570413823 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 45458 10325 IQKSPEPEVL True NCI_RA007_Epitope_Rep5 1138.6233893481399 1138.6222899358602 46.346 2 -0.8901598790905293 0.27464935570413823 1.0 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1', 'TP53BP1|p.I1039Rfs*3|1|0.48|ENSG00000067369|chr15:43438368-43438384|TTGCCTGGCTTCACAGA/-|frameshift_variant'] 22199 7900 ESVNKNKF True PC9_epitope_Rep1 964.4977949122 964.49668993586 35.212 2 -0.8902192207787845 0.2746556205779736 1.0 ['ENSG00000179912|ENST00000402412|R3HDM2', 'nc|ENSG00000179912|Q9Y2K5|R3HDM2', 'ENST00000551465.1_1_12:57691871-57704220:-|nuORF'] 115982 10351 TSKFGHVFYF True PC9_epitope_Rep5 1231.6025943339098 1231.60093490379 44.8 3 -0.8902447810562245 0.2746556205779736 1.0 ['ENSG00000205784|ENST00000650722|ARRDC5', 'nc|ENSG00000205784|A6NEK1|ARRDC5'] 12370 10237 DISDSKIRY True H1975_Epitope_Rep2 1095.5560380643099 1095.5549499358601 44.383 2 -0.8902891994824528 0.27467196708551095 1.0 ['ENSG00000127948|ENST00000461988|POR', 'ENST00000487247.5_1_7:75612754-75613000:+|nuORF', 'POR|p.L511Qfs*57|1|0.45|ENSG00000127948|chr7:75985705-75985724|CGTGCGCTGGTGCCCATGTT/-|frameshift_variant'] 94450 21194 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 87.718 2 -0.8902970625666236 0.27467196708551095 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 29445 3021 FVEEWRKFVRK True NCI_RA007_Epitope_Rep2 1522.8408675366597 1522.83865987172 16.317 4 -0.8903229461727729 0.27467196708551095 1.0 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48'] 136040 10109 WRDSGSALTGP True PC9_epitope_Rep1 1145.5465360097699 1145.54488490379 43.756 3 -0.8903775646106273 0.27468204878726804 1.0 ['ENST00000286800.7_1_21:30693611-30693791:+|nuORF'] 92551 27286 RMKKKKKLLPF True PC9_epitope_Rep3 1415.91628140639 1415.91463490379 112.35 3 -0.8904018665222693 0.2746844943570356 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 31027 17955 GASTPQPLLLH True PC9_epitope_Rep4 1132.62405805448 1132.62296993586 77.118 2 -0.8904022157487017 0.2746844943570356 1.0 ['chr1:221918712-221976287|258|18.01|0.18|6.65|-|1|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|4', 'nc|ENSG00000265992|Q1W209|ESRG'] 16526 8703 EELLYLSFIE True H1975_Epitope_Rep1 1254.6383707059401 1254.63726993586 38.402 2 -0.8904455606729497 0.2746844943570356 1.0 ['nc|ENSG00000042317|Q9P0W8-3|SPATA7', 'ENST00000556666.5_1_14:88883017-88904763:+|nuORF', 'nc|ENSG00000042317|Q9P0W8-2|SPATA7', 'SPATA7|p.H578Ifs*18|1|0.05|ENSG00000042317|chr14:88438352-88438353|-/CATATCCAAAGCCT|frameshift_variant', 'ENSG00000042317|ENST00000393545|SPATA7'] 131734 8834 VTPGYLFPP True H1975_Epitope_Rep3 989.5222187548899 989.52112993586 38.986 2 -0.890513537872851 0.2747084740580133 1.0 ['ENSG00000126062|ENST00000266025|TMEM115'] 46440 11429 ISTCASHFTLV True PC9_epitope_Rep1 1177.5801446371702 1177.5784949037902 48.84 3 -0.8905441568563436 0.2747185545517721 1.0 ['OR6N1|p.V247L|1|0.55|ENSG00000197403|chr1:158765944-158765944|C/G|missense_variant'] 82863 1970 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 11.104 3 -0.8906658922137244 0.2748509567948415 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 47526 6478 IVSGKYDS True PC9_epitope_Rep5 867.43379767331 867.43270993586 29.89 2 -0.8906811281455838 0.2748509567948415 1.0 ['nc|ENSG00000069424|Q13303-4|KCNAB2', 'nc|ENSG00000069424|Q13303-2|KCNAB2', 'nc|ENSG00000069424|Q13303|KCNAB2', 'nc|ENSG00000069424|Q13303-5|KCNAB2', 'ENSG00000069424|ENST00000378083|KCNAB2'] 123661 6351 VGQPSHPV True PC9_epitope_Rep3 819.4239016959499 819.42280993586 29.456 2 -0.8906850051406581 0.2748509567948415 1.0 ['ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 3191 5977 AGEEPPAQPP True H1975_Epitope_Rep3 991.4610750503098 991.45996993586 28.002 2 -0.8906891279959437 0.2748509567948415 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 16683 7563 EERKEYFYKYF True PC9_epitope_Rep5 1600.7561944228398 1600.75453490379 34.04 3 -0.8907195367285926 0.2748509567948415 1.0 ['NLRP12|p.A368E|1|0.18|ENSG00000142405|chr19:53810556-53810556|G/T|missense_variant'] 74125 7663 NEAPWVTDKRP True H1975_Epitope_Rep3 1311.65714908791 1311.6560499358602 34.457 2 -0.8907353015585998 0.2748509567948415 1.0 ['ENSG00000023839|ENST00000647814|ABCC2'] 92554 27628 RMKKKKKLLPF True PC9_epitope_Rep5 1415.91628140639 1415.91463490379 113.6 3 -0.8907497198447071 0.2748509567948415 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 42284 9707 IDTYSQSYLFN True H1975_Epitope_Rep1 1349.6139468632498 1349.6128499358601 42.265 2 -0.8907524347333946 0.2748509567948415 1.0 ['ENST00000604908.1_1_6:46626610-46636458:+|nuORF'] 93132 23503 RPPGGGGG True PC9_epitope_Rep3 653.32452200785 653.3239749679301 95.683 1 -0.8907699041580375 0.2748509567948415 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 55689 4861 LALFRVAVDK True NCI_RA007_Epitope_Rep5 1130.6811790077797 1130.67952490379 25.389 3 -0.8907890581686084 0.27486103390772654 1.0 ['nc|ENSG00000169169|Q8TCG5-2|CPT1C', 'ENSG00000169169|ENST00000598293|CPT1C', 'ENST00000596701.1_1_19:50215059-50215239:+|nuORF', 'ENST00000595901.5_1_19:50215059-50216859:+|nuORF'] 9101 12109 AVIGLTKSV True PC9_epitope_Rep5 886.5487678559 886.54766993586 51.568 2 -0.8908628823113778 0.2749152353954755 1.0 ['ENST00000475058.5_1_4:104000861-104006895:-|nuORF', 'nc|ENSG00000164039|Q9BUT1-3|BDH2', 'ENSG00000164039|ENST00000296424|BDH2'] 81500 19431 PLGQLEPV True PC9_epitope_Rep3 851.47526856247 851.47472496793 79.967 1 -0.8908746334041352 0.2749152353954755 1.0 ['ENST00000484513.1_1_3:38180924-38181542:+|nuORF'] 59979 12477 LGHPDFCL True PC9_epitope_Rep6 900.41637378736 900.41526993586 59.415 2 -0.8908752200986396 0.2749152353954755 1.0 ['ENST00000324015.7_1_17:1657824-1658322:+|nuORF'] 109281 12318 TAVFKRVL True PC9_epitope_Rep5 932.5807366905199 932.5801849679301 52.372 1 -0.8908947666370733 0.2749152353954755 1.0 ['nc|ENSG00000110075|Q5H9R7-5|PPP6R3'] 56428 15761 LDEFRALL True PC9_epitope_Rep5 975.5389314481898 975.53782993586 65.619 2 -0.8909160156311156 0.27492531091502814 1.0 ['ENST00000540418.5_1_12:68690747-68696570:-|nuORF'] 25064 23696 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 97.835 2 -0.8909397061120107 0.27493538615457297 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 116690 11355 TVCTPQRPL True PC9_epitope_Rep2 1013.5328005219299 1013.53170993586 49.0 2 -0.8909902742464128 0.274941640729213 1.0 ['ENST00000462388.5_1_1:45797680-45798503:-|nuORF', 'ENSG00000132781|ENST00000456914|MUTYH', 'nc|ENSG00000132781|Q9UIF7-5|MUTYH', 'nc|ENSG00000132781|Q9UIF7-4|MUTYH', 'nc|ENSG00000132781|Q9UIF7-3|MUTYH', 'nc|ENSG00000132781|Q9UIF7-2|MUTYH', 'nc|ENSG00000132781|Q9UIF7|MUTYH'] 86082 14345 QHSRRAPEVWK True NCI_RA007_Epitope_Rep3 1392.73746509728 1392.73636993586 63.741 2 -0.8909985681136001 0.274941640729213 1.0 ['ENST00000322177.5_1_15:75247781-75248108:-|nuORF'] 110434 5448 TEYWPEKQVAY True NCI_RA007_Epitope_Rep1 1412.66123140884 1412.65957490379 25.264 3 -0.8910787890301821 0.27500729480748654 1.0 ['PTPN5|p.E415K|1|0.37|ENSG00000110786|chr11:18732678-18732678|C/T|missense_variant'] 12584 9661 DKYRDQYNWFF True NCI_RA007_Epitope_Rep1 1580.7048275563195 1580.70319490379 41.576 3 -0.8911136472823256 0.2750375145890068 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 82862 1908 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 10.75 3 -0.8911360890272509 0.2750375145890068 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 5525 7771 ALYVLMVLGF True PC9_epitope_Rep1 1124.6303893048798 1124.62928993586 34.713 2 -0.8911432881157859 0.2750375145890068 1.0 ['ENSG00000180509|ENST00000399286|KCNE1'] 72918 8622 MPVRLLGHSPV True NCI_RA007_Epitope_Rep1 1204.67504808152 1204.67341490379 37.539 3 -0.8911696712815714 0.2750475872896781 1.0 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B'] 55382 8097 LAEQLRRWDN True H1975_Epitope_Rep1 1299.6683824779498 1299.66728993586 36.09 2 -0.8912150591770507 0.27507155361658375 1.0 ['ANLN|p.R153L|1|0.36|ENSG00000011426|chr7:36399364-36399364|G/T|missense_variant'] 43326 23130 IFWKLVKW True PC9_epitope_Rep2 1118.6640723916598 1118.66296993586 94.46 2 -0.8912675414207358 0.2750816255644321 1.0 ['ENST00000255305.10_3_13:21436952-21442818:-|nuORF'] 4963 18803 ALGLANFNAI True PC9_epitope_Rep2 1002.5498304850599 1002.54872993586 77.698 2 -0.8912740769287368 0.2750916972324108 1.0 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.P503Sfs*32|1|0.14|ENSG00000163359|chr2:237381305-237381306|-/A|frameshift_variant'] 127642 16288 VPAFLLIG True NCI_RA007_Epitope_Rep5 828.5109257951999 828.50982993586 69.408 2 -0.8913461096430352 0.2751535191308455 1.0 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF'] 139720 23343 YNPVQILGYLF True PC9_epitope_Rep2 1325.70197402201 1325.70086993586 95.264 2 -0.8913504395417983 0.2751535191308455 1.0 142059 4016 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 20.273 3 -0.8914343422304987 0.2751635893802359 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 24692 20694 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.5424049679301 85.706 1 -0.8914934454946657 0.2751736593498194 1.0 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 72136 24499 MFRRKRCL True H1975_Epitope_Rep3 1108.6110083563199 1108.60990993586 101.97 2 -0.8915704262891345 0.2751837290396077 1.0 ['ENST00000465878.6_2_16:57792547-57792799:-|nuORF'] 77801 18217 NTVITPMLNP True PC9_epitope_Rep6 1098.57433098074 1098.5732299358601 82.715 2 -0.8915774024159047 0.2751937984496124 1.0 ['ENSG00000166884|ENST00000300127|OR4D6'] 82861 1847 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 10.404 3 -0.8915956599240878 0.2752240050010419 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 12674 6466 DLDPVSEDP True H1975_Epitope_Rep2 985.42402083525 985.42347496793 29.789 1 -0.8916082782619982 0.2752240050010419 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 60409 15012 LGTRSRSL True PC9_epitope_Rep2 888.51411368268 888.5130099358599 62.998 2 -0.8916375695082207 0.2752240050010419 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 23393 12138 EVSCWPTL True PC9_epitope_Rep1 933.42660411789 933.42550993586 51.55 2 -0.8916484333342033 0.27523024990623307 1.0 ['ENSG00000196865|ENST00000369301|NHLRC2'] 5441 14874 ALVFSIMSL True PC9_epitope_Rep5 979.5412399473099 979.54014993586 62.215 2 -0.8916975618276616 0.27523024990623307 1.0 ['ENST00000453450.2_1_12:120031743-120072065:+|nuORF', 'ENSG00000224982|ENST00000426426|TMEM233'] 60316 16605 LGSGQGLF True PC9_epitope_Rep5 777.40210362221 777.40100993586 68.877 2 -0.8917336978593249 0.2752403178307496 1.0 ['ENST00000374608.3_1_1:23694548-23694674:-|nuORF'] 20663 12558 EQAQQIRLQAE True H1975_Epitope_Rep1 1312.6735274280397 1312.67242993586 53.349 2 -0.8917728961882062 0.27527051992610185 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 19786 16369 ELSGKNRQYP True H1975_Epitope_Rep2 1190.6043852390599 1190.6032899358602 68.184 2 -0.8917921914850367 0.27527051992610185 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 109672 5684 TEASRTHPSP True H1975_Epitope_Rep3 1081.5152358814898 1081.5141299358602 26.892 2 -0.8917969272506554 0.27527051992610185 1.0 ['nc|ENSG00000162888|Q96MC9|IKBKE-AS1'] 45661 11263 IRHFMELV True PC9_epitope_Rep4 1043.5586213469498 1043.55807496793 51.098 1 -0.8918321426657824 0.2753083675963996 1.0 ['ENST00000498078.1_1_13:41303510-41323454:-|nuORF', 'ENSG00000102738|ENST00000323563|MRPS31'] 99582 11570 SIEPWLKVSNE True H1975_Epitope_Rep1 1300.66631678928 1300.66520993586 49.49 2 -0.8918360672617779 0.2753107854712133 1.0 ['nc|ENSG00000189057|Q6SJ93-2|FAM111B', 'ENSG00000189057|ENST00000343597|FAM111B'] 98495 7282 SFKKFVRRAVY True NCI_RA007_Epitope_Rep4 1399.8088391323902 1399.80774993586 34.647 2 -0.8918562020676347 0.2753107854712133 1.0 ['ENST00000378026.4_3_12:106631936-106632293:-|nuORF'] 46788 14069 ITGAFPPS True H1975_Epitope_Rep2 788.40685464948 788.40630496793 59.268 1 -0.8918596487575148 0.2753107854712133 1.0 ['ENST00000415522.1_1_X:22454332-22454536:+|nuORF'] 93135 21495 RPPGGGGG True PC9_epitope_Rep6 653.32452200785 653.3239749679301 95.554 1 -0.8919425450159564 0.2753347408189344 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 112557 4773 TLEERSGP True NCI_RA007_Epitope_Rep3 887.4348603024698 887.43376993586 25.737 2 -0.89196288064782 0.27534098169393595 1.0 ['ENSG00000130202|ENST00000252483|NECTIN2'] 94452 21425 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 88.647 2 -0.8919641890661438 0.27534098169393595 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 65222 5797 LQRSETEP True H1975_Epitope_Rep2 958.4719740871799 958.47086993586 27.287 2 -0.8920270963354144 0.2753788247058987 1.0 ['ENSG00000130962|ENST00000378628|PRRG1'] 15933 4585 EDLRTKLTD True PC9_epitope_Rep4 1089.5666027480102 1089.56550993586 24.133 2 -0.8920519514092783 0.2753913031401469 1.0 ['nc|ENSG00000176049|Q96AA8-2|JAKMIP2', 'nc|ENSG00000176049|Q96AA8|JAKMIP2', 'ENSG00000176049|ENST00000616793|JAKMIP2', 'JAKMIP2|p.R646Efs*8|1|0.2|ENSG00000176049|chr5:147628810-147628810|T/-|frameshift_variant'] 33151 8674 GITYAWFKLYV True NCI_RA007_Epitope_Rep2 1359.72270946659 1359.72106490379 38.386 3 -0.8920610893257159 0.2753913031401469 1.0 ['ENSG00000159063|ENST00000299626|ALG8'] 61181 15571 LILEHDTP True H1975_Epitope_Rep2 936.4916469026 936.49054993586 65.05 2 -0.8920790381032391 0.2753913031401469 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant'] 22258 4098 ETAQKIAK True NCI_RA007_Epitope_Rep2 887.5076313199098 887.50652993586 20.58 2 -0.8920880429653466 0.2753913031401469 1.0 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 94451 21341 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 88.307 2 -0.89210301353333 0.27540136659074493 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 80168 13883 PFTINNLTI True PC9_epitope_Rep4 1031.56514619603 1031.56404993586 61.301 2 -0.8921778459099935 0.27542531768627176 1.0 ['nc|ENSG00000155975|Q8NEZ2-3|VPS37A', 'ENSG00000155975|ENST00000324849|VPS37A', 'ENST00000520639.1_1_5:153873211-153873349:+|nuORF'] 12190 6915 DIFKKKEV True NCI_RA007_Epitope_Rep4 1005.5858816406098 1005.58478993586 33.216 2 -0.8923024393841795 0.2754770435797017 1.0 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618'] 70587 3909 LWHFRYESLKH True NCI_RA007_Epitope_Rep5 1514.7782672801 1514.7766349037902 21.339 3 -0.8923164140953861 0.27547945395714424 1.0 ['ENSG00000105851|ENST00000496166|PIK3CG', 'PIK3CG|p.L626*|1|0.13|ENSG00000105851|chr7:106869434-106869434|G/-|frameshift_variant'] 109381 6247 TDAAELWSTCF True H1975_Epitope_Rep3 1242.5226893307001 1242.5210549037902 29.042 3 -0.8923928515938534 0.27547945395714424 1.0 ['nc|ENSG00000148362|Q9BUH6-2|PAXX', 'ENSG00000148362|ENST00000371620|PAXX'] 112261 20428 TKRKRKKQR True H1975_Epitope_Rep2 1227.8000057841898 1227.79837490379 84.641 3 -0.8924146365993266 0.27547945395714424 1.0 ['ENSG00000003436|ENST00000233156|TFPI'] 74021 11129 NDFLLVTKT True H1975_Epitope_Rep3 1049.57571087973 1049.57460993586 47.903 2 -0.8924503806590031 0.275489515345091 1.0 ['ENSG00000187510|ENST00000344636|PLEKHG7'] 44115 16339 IIPPNFQEAF True PC9_epitope_Rep3 1174.60225998074 1174.60060490379 67.982 3 -0.8924707382350245 0.2754957507082153 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 103981 8430 SQAPPVPLASP True NCI_RA007_Epitope_Rep1 1062.57095985246 1062.5698699358602 36.793 2 -0.8924725528011722 0.2754957507082153 1.0 ['nc|ENSG00000003249|Q9H9R9-3|DBNDD1'] 135725 23409 WLVKRLHKL True NCI_RA007_Epitope_Rep5 1191.7604323879898 1191.75932993586 97.335 2 -0.8925547660057059 0.2755196978323358 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 72127 6315 MFLYFQTI True PC9_epitope_Rep1 1061.52558988317 1061.5244899358602 29.104 2 -0.8926255259150789 0.2755283401371879 1.0 ['nc|ENSG00000077044|Q16760-2|DGKD'] 93130 18750 RPPGGGGG True NCI_RA007_Epitope_Rep3 653.32452200785 653.3239749679301 81.99 1 -0.8926906823755325 0.2755283401371879 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 56276 12503 LDACRCMINL True PC9_epitope_Rep5 1150.52970637078 1150.52860993586 53.091 2 -0.8927473419903438 0.2755283401371879 1.0 ['ENSG00000137225|ENST00000398776|CAPN11', 'CAPN11|p.M622L|1|0.31|ENSG00000137225|chr6:44180992-44180992|A/C|missense_variant'] 104593 24835 SQRKWKKQKI True NCI_RA007_Epitope_Rep1 1328.80408810512 1328.80298993586 102.8 2 -0.8927683558451086 0.2755283401371879 1.0 ['ENST00000589346.1_1_18:13666456-13666642:-|nuORF'] 17130 12502 EGNFEVQV True NCI_RA007_Epitope_Rep5 920.4239612655998 920.42286993586 54.746 2 -0.8927796959149726 0.2755283401371879 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'VPS13B|p.I2411Rfs*23|1|0.19|ENSG00000132549|chr8:99766880-99766893|TCAATCTCGTGAAT/-|frameshift_variant'] 131529 16789 VTKTSIKI True H1975_Epitope_Rep3 888.5644179200399 888.56332993586 70.128 2 -0.8927950897706933 0.2755307479762847 1.0 ['nc|ENSG00000120659|O14788-2|TNFSF11', 'nc|ENSG00000120659|O14788-3|TNFSF11', 'ENSG00000120659|ENST00000398795|TNFSF11'] 131660 6347 VTLTTTEKPLR True NCI_RA007_Epitope_Rep3 1257.72925139901 1257.72814993586 31.97 2 -0.8927951438762792 0.2755307479762847 1.0 ['ENSG00000230873|ENST00000536551|STMND1'] 43109 7410 IEYEHRAP True H1975_Epitope_Rep3 1013.49304388493 1013.49194993586 33.48 2 -0.8928140168651059 0.2755307479762847 1.0 ['ENSG00000168769|ENST00000380013|TET2'] 111884 20343 TINYGEKYI True PC9_epitope_Rep5 1099.5549754351498 1099.5538699358601 83.284 2 -0.8929144541568835 0.27554703987559703 1.0 ['ENST00000520944.5_1_8:67834209-67834347:-|nuORF'] 116834 15120 TVEMCYPPI True PC9_epitope_Rep1 1051.4718400581498 1051.47074993586 62.978 2 -0.8929187485957721 0.27554703987559703 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'ENST00000537175.1_1_12:16554488-16554707:-|nuORF'] 92263 17212 RLKTAAAAAA True NCI_RA007_Epitope_Rep5 942.5610638750998 942.55996993586 72.978 2 -0.8929273919639328 0.27554703987559703 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 120931 5491 VENWQGNPIQK True NCI_RA007_Epitope_Rep2 1311.6571490879098 1311.6555149037902 25.976 3 -0.8929647116737748 0.27556715630466777 1.0 ['ENSG00000129933|ENST00000262815|MAU2'] 15640 12780 EASVSALGLLP True H1975_Epitope_Rep1 1055.5862755634298 1055.5851699358602 54.221 2 -0.8929874513208728 0.27556715630466777 1.0 ['ENST00000254480.9_1_3:47755977-47762221:-|nuORF'] 127595 1537 VNVKREYDHM True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 8.5094 3 -0.8930202498537753 0.275577214100268 1.0 ['FLI1|p.Y358Tfs*41|1|0.43|ENSG00000151702|chr11:128810700-128810700|T/-|frameshift_variant', 'nc|ENSG00000151702|Q01543-3|FLI1', 'FLI1|p.S406Ifs*36|1|0.1|ENSG00000151702|chr11:128810843-128810844|-/A|frameshift_variant', 'ENSG00000151702|ENST00000527786|FLI1', 'FLI1|p.P113Lfs*5|1|0.15|ENSG00000151702|chr11:128768220-128768220|C/-|frameshift_variant', 'ENST00000608055.1_1_11:128628003-128638319:+|nuORF'] 10561 7188 CMDMRKRFCYR True NCI_RA007_Epitope_Rep2 1507.6668856332699 1507.6652249037902 32.58 3 -0.8931713204897752 0.27561503859610154 1.0 ['FBN2|p.S1738R|1|0.29|ENSG00000138829|chr5:128309386-128309386|G/T|missense_variant'] 104 7441 AAASGAKCVLT True H1975_Epitope_Rep2 990.5168161046199 990.51570993586 33.567 2 -0.8932688748890409 0.2756452083130874 1.0 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588863.1_1_18:11999160-12009987:+|nuORF'] 9337 14603 AVRGVMWWPS True H1975_Epitope_Rep3 1187.59098410439 1187.59047496793 61.539 1 -0.8932694095962738 0.2756452083130874 1.0 ['ENST00000584509.1_1_18:9322061-9334153:-|nuORF'] 91893 14447 RKLEGRRKEWM True H1975_Epitope_Rep1 1487.81433551899 1487.8132299358601 60.767 2 -0.8932877147927984 0.2756452083130874 1.0 ['ENST00000430321.5_1_2:170821003-170871346:+|nuORF'] 19973 12934 ELWDRLQIP True PC9_epitope_Rep1 1168.6240580544797 1168.62296993586 54.623 2 -0.8933305605102363 0.2756653200616384 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 67424 10530 LSSPCDNRVP True PC9_epitope_Rep3 1086.51279335334 1086.5116899358602 45.443 2 -0.8933341657674589 0.2756653200616384 1.0 ['ENSG00000139318|ENST00000279488|DUSP6', 'nc|ENSG00000139318|Q16828-2|DUSP6'] 113388 12546 TLSASPHTV True PC9_epitope_Rep5 911.4712458111901 911.47014993586 53.257 2 -0.8933534709473854 0.2756753755171169 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2'] 82857 1598 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 8.9939 3 -0.8934686105646362 0.2756954855905381 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 6570 6013 APVASKSTV True PC9_epitope_Rep3 858.4810822189 858.47998993586 28.182 2 -0.893473824967865 0.2756954855905381 1.0 ['ENSG00000100625|ENST00000216513|SIX4'] 71669 13869 MEAVVSEPSA True PC9_epitope_Rep5 1018.4641118254199 1018.46300993586 58.369 2 -0.893527400565614 0.2757194219637131 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 16290 7080 EEFQEHKT True H1975_Epitope_Rep2 1046.4668887067398 1046.4657899358601 32.164 2 -0.8935916417833102 0.27572182121043864 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 29905 24057 FVWGRTRL True PC9_epitope_Rep2 1033.5821336728497 1033.5810299358602 98.039 2 -0.8935961393623889 0.27572182121043864 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF'] 81603 11575 PLLALTTT True H1975_Epitope_Rep2 828.4956696538801 828.49456993586 49.588 2 -0.8936354690687469 0.27572182121043864 1.0 ['PI4KB|p.R366Efs*33|1|0.12|ENSG00000143393|chr1:151307660-151307660|G/-|frameshift_variant'] 79718 13126 PDVNHFREMPG True H1975_Epitope_Rep3 1297.58735527593 1297.58624993586 55.736 2 -0.8937336424066105 0.27573187490456824 1.0 ['MMP12|p.H98N|1|0.23|ENSG00000262406|chr11:102872923-102872923|G/T|missense_variant'] 112593 13705 TLEQVERERRK True H1975_Epitope_Rep3 1442.7953738962199 1442.79426993586 58.012 2 -0.8937886694782318 0.2757835706948724 1.0 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 112875 14572 TLKISDLV True PC9_epitope_Rep1 887.53278343859 887.53168993586 60.875 2 -0.8939316410123155 0.27584148795891456 1.0 ['ENST00000439876.1_1_9:20683317-20683413:-|nuORF'] 79680 16970 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.45488993586 70.099 2 -0.8939342914450419 0.27584148795891456 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 53616 6734 KRTQQEYYERE True NCI_RA007_Epitope_Rep5 1528.7270195528797 1528.72537490379 32.575 3 -0.8939846941638283 0.27584148795891456 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'FAM184A|p.K1048Vfs*7|1|0.04|ENSG00000111879|chr6:118961960-118961961|-/TTTTAAC|frameshift_variant', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A', 'FAM184A|p.K640*|1|0.36|ENSG00000111879|chr6:119003520-119003521|-/A|frameshift_variant'] 59623 18137 LFYIPMIL True H1975_Epitope_Rep2 1008.5718117995999 1008.57070993586 75.172 2 -0.8940134165502589 0.27585153929433975 1.0 ['ENSG00000176922|ENST00000322101|OR51S1'] 87672 6476 QQTEIYVVP True NCI_RA007_Epitope_Rep4 1075.5549754351498 1075.5538699358601 31.507 2 -0.8940424260192881 0.27587547017918856 1.0 ['ENST00000489116.1_1_6:28415047-28415581:+|nuORF', 'nc|ENSG00000166260|Q9Y6N1-2|COX11', 'ENSG00000166260|ENST00000299335|COX11'] 132786 23790 VVIVLKRDKRR True NCI_RA007_Epitope_Rep3 1380.9041364995599 1380.90250490379 103.11 3 -0.8940794855843346 0.2758994003997335 1.0 ['ENST00000229395.7_1_12:27118819-27118963:+|nuORF'] 386 23029 AALAWRRAPE True H1975_Epitope_Rep3 1139.6199757335498 1139.6188699358602 96.189 2 -0.8941012910492676 0.2759080121577172 1.0 ['ENST00000295878.7_1_3:113729745-113729820:-|nuORF'] 93127 25531 RPPGGGGG True H1975_Epitope_Rep1 653.32452200785 653.3239749679301 105.81 1 -0.8941054026844143 0.2759080121577172 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 83775 24606 PVKAAAAAAAA True PC9_epitope_Rep4 910.5236157372198 910.52250993586 103.14 2 -0.8941088236383484 0.2759080121577172 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 23242 4093 EVNLAGGGVGP True H1975_Epitope_Rep3 968.4927095317597 968.49160993586 20.869 2 -0.8941583129273365 0.2759080121577172 1.0 ['ENST00000370126.1_1_1:100731885-100732210:+|nuORF'] 23911 4906 EYLCRQHADP True H1975_Epitope_Rep2 1230.54515611078 1230.5440499358601 23.954 2 -0.8941952016299222 0.2759080121577172 1.0 ['ENSG00000116819|ENST00000373235|TFAP2E'] 26129 7746 FGVVFSHR True NCI_RA007_Epitope_Rep1 947.49773534255 947.49662993586 34.123 2 -0.8942588626004815 0.27592045186449615 1.0 ['ENST00000488316.1_1_20:62290002-62290707:+|nuORF', 'ENST00000370018.7_1_20:62289788-62290707:+|nuORF', 'ENST00000356810.5_1_20:62289730-62290707:+|nuORF'] 89936 14100 RCWWRWPRCYW True H1975_Epitope_Rep3 1696.7656115047598 1696.7645099358601 59.562 2 -0.8942825993046701 0.27592045186449615 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 25157 20968 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 85.477 2 -0.8943186441660589 0.27592045186449615 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 5481 13392 ALWEWIALS True PC9_epitope_Rep6 1087.5702315764697 1087.56912993586 63.183 2 -0.8943194277949996 0.27592045186449615 1.0 ['BRINP3|p.E275Gfs*3|1|0.19|ENSG00000162670|chr1:190226221-190226222|-/T|frameshift_variant', 'BRINP3|p.R709Vfs*2|1|0.41|ENSG00000162670|chr1:190098194-190098194|G/-|frameshift_variant', 'ENSG00000162670|ENST00000367462|BRINP3'] 4286 10366 AIGRIYEEQRK True PC9_epitope_Rep2 1361.74154741821 1361.7404499358602 45.198 2 -0.8943346907987261 0.27592667119998887 1.0 ['ENSG00000047621|ENST00000261250|C12orf4'] 3793 3862 AGTRTEAEAL True PC9_epitope_Rep4 1017.5090878718898 1017.50798993586 21.034 2 -0.8944007347396095 0.27592667119998887 1.0 ['ENST00000531925.5_1_19:1806419-1810672:-|nuORF'] 9054 5991 AVHRVCLPD True NCI_RA007_Epitope_Rep1 1008.5174848109599 1008.51638993586 27.348 2 -0.8944327983431186 0.27593910883532463 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E', 'TMPRSS11E|p.A301E|1|0.59|ENSG00000087128|chr4:68477563-68477563|C/A|missense_variant'] 138071 13929 YGETWHKGGIL True PC9_epitope_Rep2 1259.6298717109098 1259.6287699358602 58.857 2 -0.8944447074580815 0.27593910883532463 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 28722 8434 FSRYWRRWNRF True H1975_Epitope_Rep1 1672.8487468817596 1672.84711490379 37.367 3 -0.8944691110039187 0.27593910883532463 1.0 ['nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-2|CACNA1C'] 44796 9872 IM[Oxidation]NQRTRAKMA True H1975_Epitope_Rep1 1334.69110953226 1334.6900099358602 42.906 2 -0.8944825050493664 0.27593910883532463 1.0 ['OR10A2|p.L131M|1|0.42|ENSG00000170790|chr11:6870145-6870145|C/A|missense_variant'] 83776 24777 PVKAAAAAAAA True PC9_epitope_Rep4 910.5236157372198 910.52250993586 103.81 2 -0.8945209297686844 0.275943887108188 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 121031 10708 VEQINRKQD True NCI_RA007_Epitope_Rep2 1128.5887351749197 1128.5876299358601 46.25 2 -0.8945749137233086 0.275943887108188 1.0 ['ENSG00000149781|ENST00000345728|FERMT3', 'nc|ENSG00000149781|Q86UX7|FERMT3'] 69840 14961 LVHDFVVGQQ True PC9_epitope_Rep1 1140.5927579262 1140.5916699358602 62.369 2 -0.8945920816400519 0.275943887108188 1.0 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19', 'nc|ENSG00000155229|Q96T76-6|MMS19'] 52761 11863 KNGYTAFDLV True NCI_RA007_Epitope_Rep1 1126.56587447202 1126.56476993586 50.125 2 -0.8946355483522508 0.275943887108188 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 64491 11804 LPQNDDEL True PC9_epitope_Rep1 942.42944056886 942.42834993586 50.272 2 -0.894641849902773 0.275943887108188 1.0 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'SH3KBP1|p.D303Vfs*16|1|0.29|ENSG00000147010|chrX:19608028-19608035|GCCTACGT/-|frameshift_variant'] 30033 5192 FYFFPWLRMWR True NCI_RA007_Epitope_Rep2 1647.8172956411097 1647.8156549037901 24.815 3 -0.8946483426157643 0.275943887108188 1.0 ['ENSG00000187186|ENST00000421828|unknown'] 33677 8952 GLGSQEALPPP True H1975_Epitope_Rep1 1064.5502244078798 1064.54912993586 39.339 2 -0.8946790082817682 0.2759539336755932 1.0 ['ENSG00000118094|ENST00000264029|TREH', 'nc|ENSG00000118094|O43280-2|TREH'] 137841 6136 YERYEEHEEY True H1975_Epitope_Rep2 1445.5735386032502 1445.57244993586 28.579 2 -0.8947005390361827 0.27597785517059564 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 94483 15250 RRRRRRPPPRR True NCI_RA007_Epitope_Rep4 1557.9777444190497 1557.97609490379 66.295 3 -0.8947905120759034 0.27598645873799876 1.0 ['ENST00000533683.6_2_19:14201006-14201489:-|nuORF'] 46359 5400 ISRKDSERQL True NCI_RA007_Epitope_Rep1 1230.66804812478 1230.66640490379 25.079 3 -0.8948078761664886 0.27598645873799876 1.0 ['HCK|p.A154S|1|0.27|ENSG00000101336|chr20:32079805-32079805|G/T|missense_variant'] 3693 8407 AGRHGDVR True NCI_RA007_Epitope_Rep2 866.4470967520199 866.4465449679301 37.343 1 -0.8948111598583172 0.27598645873799876 1.0 ['ENST00000585320.5_1_17:46019001-46022013:+|nuORF', 'ENST00000434554.6_1_17:46018968-46020676:+|nuORF'] 83764 4434 PVHYQHGTGLS True PC9_epitope_Rep4 1194.5781704912201 1194.57652490379 23.511 3 -0.8948522138912497 0.27598645873799876 1.0 ['DRD3|p.Q144L|1|0.32|ENSG00000151577|chr3:114147510-114147510|T/A|missense_variant'] 74428 11386 NETLRYSVP True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 49.118 2 -0.8948628201744658 0.27598645873799876 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1'] 64354 23302 LPLIWKKKCL True PC9_epitope_Rep5 1240.77297121764 1240.7718699358602 94.611 2 -0.8948896507992378 0.27603429617913927 1.0 ['ENSG00000112761|ENST00000368666|CCN6', 'nc|ENSG00000112761|O95389-2|CCN6'] 37126 14452 GVPYLEFRYK True NCI_RA007_Epitope_Rep5 1270.6710082468996 1270.66990993586 62.272 2 -0.8949123069252567 0.27603429617913927 1.0 ['SHANK1|p.L1458Sfs*16|1|0.67|ENSG00000161681|chr19:50667588-50667588|G/-|frameshift_variant', 'nc|ENSG00000161681|Q9Y566-3|SHANK1', 'ENSG00000161681|ENST00000293441|SHANK1', 'SHANK1|p.Q869Sfs*16|1|0.65|ENSG00000161681|chr19:50672087-50672087|G/-|frameshift_variant'] 126613 19466 VLMIRMLR True NCI_RA007_Epitope_Rep5 1030.61436240126 1030.6132699358602 81.764 2 -0.8949293319884405 0.27605821390418844 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 30228 17681 FYTMFTRLLNP True NCI_RA007_Epitope_Rep2 1401.7114931598899 1401.7103899358601 73.515 2 -0.8949588174922216 0.2760682574916759 1.0 ['OR2T8|p.P281R|1|0.37|ENSG00000177462|chr1:247921859-247921859|C/G|missense_variant'] 119530 8026 VASIKVSAE True H1975_Epitope_Rep3 902.50729696674 902.50618993586 35.845 2 -0.8950204122399715 0.27607830080048834 1.0 ['ENSG00000185504|ENST00000327787|FAAP100', 'nc|ENSG00000185504|Q0VG06-3|FAAP100', 'nc|ENSG00000185504|Q0VG06-2|FAAP100'] 119929 19543 VDLSQHLYTFS True PC9_epitope_Rep1 1308.6350166609998 1308.6339099358602 79.995 2 -0.8950909632785183 0.2760983865821345 1.0 ['nc|ENSG00000186628|A1L4K1-2|FSD2', 'ENSG00000186628|ENST00000334574|FSD2'] 101543 8942 SLLGGRGSLP True PC9_epitope_Rep1 955.5450794577899 955.5439899358599 39.236 2 -0.8951174937564236 0.2760983865821345 1.0 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000529941.1_1_11:124767484-124767703:-|nuORF', 'ENST00000533337.1_1_11:124766750-124767703:-|nuORF'] 131825 22188 VTQPEKLL True PC9_epitope_Rep1 926.5436824754598 926.54258993586 90.166 2 -0.8951520350819325 0.2761223017590589 1.0 ['nc|ENSG00000211796|A0A0A6YYK6|TRAV16'] 34959 17406 GQRLPVEDFSL True NCI_RA007_Epitope_Rep3 1259.6510010783097 1259.64990993586 76.37 2 -0.8951767242154672 0.27612468267510093 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 120996 7943 VEPSDLQIPP True H1975_Epitope_Rep3 1093.5655401188499 1093.56444993586 35.523 2 -0.8951845198729602 0.27612468267510093 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 127242 21285 VLWWKYEL True PC9_epitope_Rep5 1135.60661708519 1135.6055299358602 86.926 2 -0.8951879965528144 0.27612468267510093 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF'] 93913 20587 RRFVGLGT True NCI_RA007_Epitope_Rep1 904.5242844435598 904.52318993586 84.303 2 -0.8952060430224421 0.2761533553416373 1.0 ['nc|ENSG00000153086|Q8TDX5-2|ACMSD', 'ENSG00000153086|ENST00000356140|ACMSD'] 61414 16097 LITYMLVWIQM True PC9_epitope_Rep5 1409.74510178729 1409.74400993586 66.905 2 -0.8952160977827899 0.2761533553416373 1.0 ['PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant'] 96866 7797 SASRPRNSI True PC9_epitope_Rep1 986.52574099554 986.52464993586 34.815 2 -0.8952477013310739 0.2761533553416373 1.0 ['ENST00000512996.6_2_5:43603376-43613019:+|nuORF'] 55361 6746 LAELRQRLQA True PC9_epitope_Rep5 1196.69895433024 1196.69731490379 30.919 3 -0.8952499493972702 0.2761533553416373 1.0 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C'] 25195 987 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 5.7606 2 -0.8952532868482195 0.2761533553416373 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15959 9025 EDPSKEDPLQI True NCI_RA007_Epitope_Rep2 1269.6088614828097 1269.60776993586 39.705 2 -0.895260112791473 0.2761533553416373 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 115512 22200 TRRPPATA True PC9_epitope_Rep1 868.4878989348399 868.48680993586 90.212 2 -0.895262976844571 0.2761533553416373 1.0 ['CLEC14A|p.P315Rfs*26|1|0.14|ENSG00000176435|chr14:38255079-38255079|G/-|frameshift_variant', 'CLEC14A|p.P441Rfs*24|1|0.17|ENSG00000176435|chr14:38254703-38254703|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 58779 5283 LESHFQSQKDC True H1975_Epitope_Rep3 1320.57685016188 1320.57520490379 25.403 3 -0.8953561414409579 0.27617581381156464 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 39665 10849 HLQKPYEIN True PC9_epitope_Rep4 1140.5927579262 1140.59110490379 49.49 3 -0.8953883950817085 0.27617581381156464 1.0 ['ENSG00000110367|ENST00000534980|DDX6'] 112426 15760 TLDAQDVLA True PC9_epitope_Rep3 944.4814761417199 944.48036993586 65.777 2 -0.8953889357857069 0.27617581381156464 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN'] 131723 11043 VTPEIPAGLP True PC9_epitope_Rep3 992.5542471591598 992.55314993586 47.47 2 -0.8954005452394361 0.27617581381156464 1.0 ['ENSG00000125657|ENST00000245817|TNFSF9'] 60158 8326 LGNRDMGRPM True PC9_epitope_Rep4 1145.5433822889697 1145.54173490379 39.484 3 -0.8954053413934947 0.27617581381156464 1.0 ['nc|ENSG00000198720|Q86YJ7-2|ANKRD13B', 'ENST00000487527.5_1_17:27916841-27940597:+|nuORF', 'ENSG00000198720|ENST00000394859|ANKRD13B'] 37405 23580 GVSYVPYCRS True PC9_epitope_Rep1 1129.52262976105 1129.52207496793 95.488 1 -0.8954256985268071 0.2761844003106624 1.0 ['nc|ENSG00000134769|Q9Y4J8-8|DTNA', 'nc|ENSG00000134769|Q9Y4J8-12|DTNA', 'nc|ENSG00000134769|Q9Y4J8-16|DTNA', 'nc|ENSG00000134769|Q9Y4J8-5|DTNA', 'nc|ENSG00000134769|Q9Y4J8-4|DTNA', 'nc|ENSG00000134769|Q9Y4J8-3|DTNA'] 22056 9315 ESLPYLPLHLH True H1975_Epitope_Rep1 1317.70812203161 1317.7070299358602 40.737 2 -0.8954290828582198 0.2761844003106624 1.0 ['ENSG00000184860|ENST00000328945|SDR42E1'] 93845 5429 RRCWRRMLHPW True NCI_RA007_Epitope_Rep5 1595.8190440599499 1595.81740490379 27.57 3 -0.895453452699158 0.2761844003106624 1.0 ['ENST00000328945.6_1_16:82033365-82033524:-|nuORF'] 33845 16434 GLPEKAQEVP True PC9_epitope_Rep2 1066.5658744720197 1066.56476993586 68.455 2 -0.8954567522512967 0.2761844003106624 1.0 ['ENST00000430334.7_1_17:43514711-43515125:-|nuORF'] 137950 19810 YFFNGPIQFEY True PC9_epitope_Rep3 1423.6448530687098 1423.6437499358601 81.433 2 -0.8954635772591455 0.2761844003106624 1.0 ['ENSG00000137745|ENST00000260302|MMP13'] 142057 3591 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 18.161 3 -0.8954686537018574 0.2762083073295888 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 79535 6037 PDAQTVAP True PC9_epitope_Rep5 797.3919328613299 797.39082993586 28.213 2 -0.8955288893231066 0.2762183452139905 1.0 ['ENSG00000162745|ENST00000294794|OLFML2B'] 64743 7040 LPYLPSAP True H1975_Epitope_Rep3 856.46945490604 856.46834993586 32.044 2 -0.895532434379238 0.27622072140786863 1.0 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 22202 4594 ESVTKEAPP True H1975_Epitope_Rep3 956.4814761417199 956.48036993586 22.792 2 -0.8955475977381956 0.27622072140786863 1.0 ['ENST00000267938.8_1_15:76135782-76135929:+|nuORF'] 37243 13686 GVRIQPMSER True PC9_epitope_Rep4 1171.6131761009499 1171.61152490379 60.533 3 -0.8955510994295631 0.27622072140786863 1.0 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 118830 5959 VAALLCRSP True PC9_epitope_Rep2 928.5164221818001 928.51532993586 28.31 2 -0.8955874793029177 0.27622692793055154 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.G640Afs*18|1|0.14|ENSG00000170921|chr17:63354948-63354948|G/-|frameshift_variant'] 55186 8034 LAATAVSF True PC9_epitope_Rep3 778.42250471362 778.42140993586 35.879 2 -0.8956154874493137 0.27622692793055154 1.0 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8', 'ENST00000603195.5_1_10:75559086-75560534:+|nuORF', 'ENST00000433366.6_1_10:75557251-75561274:+|nuORF'] 4450 8765 AITCFHSPFHP True H1975_Epitope_Rep3 1255.5808133435098 1255.5797099358601 38.721 2 -0.8956605456369736 0.27623696472154424 1.0 ['ENST00000544657.1_1_12:7282564-7282825:-|nuORF'] 139365 24858 YLLVKITRLG True NCI_RA007_Epitope_Rep1 1174.74377926434 1174.7426899358602 102.89 2 -0.895670637844797 0.2762431705355409 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 78881 12164 PAGAIAPLG True PC9_epitope_Rep6 765.43848913093 765.43738993586 58.145 2 -0.8956979438120889 0.2762431705355409 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 122505 4291 VGELVKVTK True NCI_RA007_Epitope_Rep4 971.60153170475 971.60042993586 22.839 2 -0.8957526421726432 0.27624937600532473 1.0 ['ENSG00000167193|ENST00000300574|CRK'] 132449 18046 VVCVPLLLLP True NCI_RA007_Epitope_Rep5 1064.6667748136 1064.66566993586 76.213 2 -0.8957800316519994 0.27624937600532473 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4'] 25104 3829 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 21.276 2 -0.8958849480806491 0.27631104578607285 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 94326 23787 RRRKRQGH True PC9_epitope_Rep2 1092.6489248763999 1092.64782993586 96.971 2 -0.8958853223850689 0.27631104578607285 1.0 ['ENST00000580483.5_1_18:10525983-10526091:+|nuORF'] 137333 16386 YDIWHRRHDYW True NCI_RA007_Epitope_Rep1 1645.75384343741 1645.75274993586 67.852 2 -0.8959025797842248 0.2763349464080201 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 121606 20004 VFFREFRF True NCI_RA007_Epitope_Rep4 1146.5974493838198 1146.5958149037901 86.511 3 -0.8959444056085499 0.2763573845044645 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ENST00000261834.9_1_14:96756535-96777546:-|nuORF'] 73611 7500 MWFSWGVL True PC9_epitope_Rep4 1024.4840594243597 1024.4829699358602 36.212 2 -0.8959762158577669 0.2763573845044645 1.0 ['nc|ENSG00000176884|Q05586-2|GRIN1', 'nc|ENSG00000176884|Q05586-3|GRIN1', 'nc|ENSG00000176884|Q05586-7|GRIN1', 'nc|ENSG00000176884|Q05586-4|GRIN1', 'ENSG00000176884|ENST00000371561|GRIN1', 'nc|ENSG00000176884|Q05586-6|GRIN1', 'nc|ENSG00000176884|Q05586-5|GRIN1'] 79358 7706 PASDPDAPP True H1975_Epitope_Rep3 865.3817621004499 865.3812149679301 34.624 1 -0.8959787373722045 0.2763573845044645 1.0 ['ENSG00000176381|ENST00000322583|PRR18'] 99819 9015 SIKWAKSVP True NCI_RA007_Epitope_Rep4 1014.5862159937799 1014.58510993586 41.509 2 -0.8960088949626273 0.2763573845044645 1.0 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 131915 11968 VTRRFWPLWDP True NCI_RA007_Epitope_Rep2 1471.77245362367 1471.7713499358601 51.149 2 -0.8960260823971515 0.2763573845044645 1.0 ['ENST00000583359.1_1_17:80407582-80408586:-|nuORF'] 66773 8481 LSLQALQAP True PC9_epitope_Rep2 939.5389314481898 939.53782993586 37.989 2 -0.8960818346977177 0.27638128249566724 1.0 ['KIAA1522|p.F728Sfs*88|1|0.28|ENSG00000162522|chr1:32771538-32771538|T/-|frameshift_variant'] 22188 5916 ESVELHDP True H1975_Epitope_Rep3 924.4188758851599 924.41776993586 27.765 2 -0.8962500878955992 0.2763913151984028 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.P1213Qfs*54|1|0.19|ENSG00000155966|chrX:148987378-148987378|C/-|frameshift_variant', 'AFF2|p.T833Qfs*26|1|0.6|ENSG00000155966|chrX:148956540-148956540|C/-|frameshift_variant'] 44594 16109 ILQHSFPKRY True NCI_RA007_Epitope_Rep2 1287.70879073795 1287.7076899358601 67.384 2 -0.8963179123752104 0.27639751552795033 1.0 ['ENST00000491845.5_2_3:58978268-59035690:-|nuORF'] 123982 11694 VGSAWAAP True PC9_epitope_Rep6 757.3758888743699 757.37478993586 56.114 2 -0.8963439543159915 0.27639751552795033 1.0 ['ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 8336 5414 ATKFSRCCP True NCI_RA007_Epitope_Rep2 1011.4630067099498 1011.46190993586 25.679 2 -0.8964362724693544 0.27642141163748285 1.0 ['ADCY7|p.L715Cfs*23|1|0.22|ENSG00000121281|chr16:50309627-50309627|C/-|frameshift_variant', 'ENSG00000121281|ENST00000673801|ADCY7'] 127945 8222 VPGYTANG True PC9_epitope_Rep4 777.36571811349 777.36516496793 39.086 1 -0.8965616750217938 0.27644147453937973 1.0 ['CLCA2|p.A725Sfs*9|1|0.16|ENSG00000137975|chr1:86453386-86453387|GC/-|frameshift_variant', 'ENSG00000137975|ENST00000370565|CLCA2', 'CLCA2|p.Q722L|1|0.14|ENSG00000137975|chr1:86453378-86453378|A/T|missense_variant'] 10636 12562 CPFGENCF True NCI_RA007_Epitope_Rep5 915.3255101776299 915.32440993586 54.974 2 -0.8965706630413465 0.27644147453937973 1.0 ['nc|ENSG00000238222|Q13434|MKRN4P'] 130261 12017 VSGGFFGIR True PC9_epitope_Rep2 938.4974009893799 938.49630993586 51.54 2 -0.8966317361831297 0.2764615363287261 1.0 ['ENSG00000214717|ENST00000652001|ZBED1'] 33707 4383 GLHKQEAP True PC9_epitope_Rep4 878.4610154806599 878.45990993586 23.302 2 -0.8966557266376853 0.2764615363287261 1.0 ['SLC39A12|p.G436W|1|0.41|ENSG00000148482|chr10:17991187-17991187|G/T|missense_variant', 'nc|ENSG00000148482|Q504Y0-5|SLC39A12', 'nc|ENSG00000148482|Q504Y0-3|SLC39A12', 'nc|ENSG00000148482|Q504Y0-4|SLC39A12', 'ENSG00000148482|ENST00000377369|SLC39A12'] 45807 10045 ISDDIPLQLVT True H1975_Epitope_Rep3 1212.66016877968 1212.65906993586 43.674 2 -0.8967426762499682 0.2764777642231341 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 25197 6056 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 31.667 2 -0.8967448178622188 0.2764777642231341 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 142055 3453 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 17.49 3 -0.8967503880755702 0.2764777642231341 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 19618 13273 ELQQYVPQL True PC9_epitope_Rep4 1116.5815245361598 1116.5804299358601 58.95 2 -0.8968649161933417 0.27652554825473397 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 134551 7614 VYRVFSKDPQ True NCI_RA007_Epitope_Rep1 1237.64552177505 1237.64386490379 33.609 3 -0.896872029105461 0.27652554825473397 1.0 ['ENSG00000255151|ENST00000527482|GLYATL1B'] 34957 5064 GQRIVSGSFGT True H1975_Epitope_Rep2 1107.5672714543498 1107.5661699358602 24.561 2 -0.8969588942370584 0.2765633014042335 1.0 ['BRAF|p.G464V|1|0.73|ENSG00000157764|chr7:140781617-140781617|C/A|missense_variant'] 3189 5968 AGEEPPAQPP True H1975_Epitope_Rep2 991.4610750503098 991.45996993586 27.938 2 -0.8970491135991464 0.27661432273980957 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 127424 6772 VNFRNVKAV True PC9_epitope_Rep2 1045.6032630402499 1045.60216993586 31.455 2 -0.8971104849501007 0.27661432273980957 1.0 ['ENSG00000133597|ENST00000072869|ADCK2'] 15768 15177 ECYDGYESSY True H1975_Epitope_Rep2 1214.4073847949398 1214.40574490379 63.533 3 -0.8971414195380789 0.27661432273980957 1.0 ['nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 32314 16032 GFEAVKEKAL True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 69.598 2 -0.8972003619782299 0.27661432273980957 1.0 ['ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 4716 2812 ALCWHLQMLAK True NCI_RA007_Epitope_Rep1 1312.6784192098 1312.6767749037901 14.776 3 -0.8972222247563366 0.27661432273980957 1.0 ['ENST00000316846.2_11:65545618-65547282:-|nuORF', 'AP5B1|p.V579Sfs*10|1|0.12|ENSG00000254470|chr11:65778758-65778758|C/-|frameshift_variant', 'ENSG00000254470|ENST00000532090|AP5B1'] 85323 14422 QESEEEKQP True PC9_epitope_Rep5 1102.4778473132599 1102.4767499358602 60.473 2 -0.8972229426936645 0.27661432273980957 1.0 ['ENSG00000135842|ENST00000367511|NIBAN1'] 128689 10476 VPVSRSLGPLG True NCI_RA007_Epitope_Rep5 1080.6291434349198 1080.6280499358602 46.928 2 -0.8972466284912095 0.27661432273980957 1.0 ['ENSG00000265203|ENST00000584701|RBP3', 'RBP3|p.R577Afs*124|1|0.23|ENSG00000265203|chr10:47350211-47350211|C/-|frameshift_variant', 'RBP3|p.P715Hfs*43|1|0.18|ENSG00000265203|chr10:47350624-47350624|C/-|frameshift_variant'] 111616 22073 TIDPAFLID True PC9_epitope_Rep2 1003.52261267771 1003.52150993586 90.377 2 -0.8973053321856195 0.27661432273980957 1.0 ['ENST00000524269.1_1_8:77488797-77488881:-|nuORF'] 14666 19085 DVFSFRKAASL True PC9_epitope_Rep5 1239.6611718391898 1239.66006993586 78.44 2 -0.8973282031309984 0.27661432273980957 1.0 ['ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 16239 11914 EEERRYYEEER True H1975_Epitope_Rep1 1586.69611334742 1586.69500993586 50.829 2 -0.8973720307476856 0.27661432273980957 1.0 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 30086 9590 FYIYRLYWWEF True NCI_RA007_Epitope_Rep1 1684.8078360728798 1684.8067299358602 41.3 2 -0.89738734350519 0.27661432273980957 1.0 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 109877 9339 TEEVRNILQ True H1975_Epitope_Rep1 1100.5825871653199 1100.5814899358602 40.83 2 -0.8973927702694903 0.27661432273980957 1.0 ['ENSG00000112365|ENST00000230122|ZBTB24'] 142054 3383 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 17.15 3 -0.8973998510965275 0.2766243485974055 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 133149 24588 VVQVIKLA True NCI_RA007_Epitope_Rep3 868.5745886809199 868.57348993586 106.35 2 -0.8974250150743954 0.27664439947889236 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 55924 4772 LARDRSSTDNR True NCI_RA007_Epitope_Rep1 1289.64362428209 1289.64196490379 22.642 3 -0.8974473723262286 0.27664439947889236 1.0 ['ENSG00000101639|ENST00000506447|CEP192'] 127187 25573 VLVIVTMLGCK True PC9_epitope_Rep5 1174.68177325474 1174.6806699358601 103.67 2 -0.8974906253731925 0.27666828355623313 1.0 ['ENST00000512560.5_1_5:79278531-79278720:-|nuORF'] 74060 8438 NDLVKITDW True NCI_RA007_Epitope_Rep2 1102.56587447202 1102.56476993586 37.463 2 -0.8975862427402923 0.2766921669715616 1.0 ['NAV3|p.I2214T|1|0.23|ENSG00000067798|chr12:78199457-78199457|T/C|missense_variant'] 92486 14184 RLVVVGGGGVG True NCI_RA007_Epitope_Rep5 968.5767139392397 968.57560993586 61.249 2 -0.8976318450331574 0.276712214861831 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2'] 58721 5969 LERTEGIGP True PC9_epitope_Rep1 970.5083595958998 970.50726993586 27.775 2 -0.8976480901536982 0.276712214861831 1.0 ['ENST00000595529.1_1_19:41112383-41114583:+|nuORF'] 125180 15730 VIHRLQLI True PC9_epitope_Rep4 990.6338348925399 990.63272993586 68.431 2 -0.8976913116596332 0.2767145688114078 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-3|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN'] 106034 6842 SSYQLKIR True NCI_RA007_Epitope_Rep5 993.5607295219299 993.55962993586 33.003 2 -0.8976994607966744 0.2767145688114078 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.L2931Wfs*101|1|0.21|ENSG00000086570|chr5:151542336-151542336|G/-|frameshift_variant', 'FAT2|p.E2578Dfs*50|1|0.03|ENSG00000086570|chr5:151543393-151543394|-/TAACCCAG|frameshift_variant', 'FAT2|p.S1818Afs*5|1|0.17|ENSG00000086570|chr5:151545676-151545676|G/-|frameshift_variant'] 113270 6941 TLRGWRTG True PC9_epitope_Rep6 945.5144480358499 945.51334993586 35.642 2 -0.8977006684715859 0.2767145688114078 1.0 ['ENSG00000149792|ENST00000279242|MRPL49'] 12309 11389 DIPAMCNNLDV True PC9_epitope_Rep2 1203.52639481215 1203.5252899358602 49.129 2 -0.8977740718771355 0.276716922565268 1.0 ['RIF1|p.Y1083C|1|0.58|ENSG00000080345|chr2:151462262-151462262|A/G|missense_variant'] 112606 14267 TLESDYWPP True PC9_epitope_Rep1 1106.49204082542 1106.49094993586 59.701 2 -0.89777741418621 0.276716922565268 1.0 ['ENST00000550079.1_1_12:50524330-50528523:-|nuORF'] 37685 10577 GVYHGTQVP True PC9_epitope_Rep2 956.4715801643598 956.47048993586 46.002 2 -0.8977926079263933 0.276716922565268 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 66796 8121 LSLSWRLFM True PC9_epitope_Rep4 1151.6161362230698 1151.61448490379 38.692 3 -0.8978248628345189 0.27674080232799836 1.0 ['nc|ENSG00000140009|Q92731-4|ESR2'] 107197 13736 SVINSNVII True PC9_epitope_Rep3 957.54949613189 957.54838993586 57.918 2 -0.8978392683251334 0.27675082448798605 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'ENST00000438101.1_1_X:49432665-49432995:-|nuORF'] 25067 24338 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 100.8 2 -0.8978982427061588 0.2767747031191542 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79852 8530 PEKAAATYEQM True H1975_Epitope_Rep1 1237.5648884958498 1237.56378993586 37.739 2 -0.8979430794246385 0.27679858108857114 1.0 ['nc|ENSG00000278535|Q6UWP2-2|DHRS11', 'ENSG00000278535|ENST00000618403|DHRS11'] 71011 25150 LYILAAKTL True H1975_Epitope_Rep2 1004.6270181766 1004.62592993586 103.33 2 -0.8979485853668946 0.27680476652348623 1.0 ['ENSG00000205670|ENST00000399292|SMIM11'] 79687 16959 PDSFNIPGSS True PC9_epitope_Rep3 1019.45598966987 1019.45488993586 70.395 2 -0.8979958263578903 0.27680476652348623 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 61176 14071 LILDHLPSVTK True H1975_Epitope_Rep1 1234.72852312302 1234.72742993586 59.29 2 -0.8980774133991176 0.27681478710285295 1.0 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 126750 25544 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 103.26 3 -0.8981084351855347 0.27682480740453363 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 39802 17147 HMPPRRCRP True PC9_epitope_Rep3 1148.5807708572 1148.57911490379 71.112 3 -0.898122735047611 0.27683482742853976 1.0 ['nc|ENSG00000115598|Q9HB29-2|IL1RL2', 'ENSG00000115598|ENST00000264257|IL1RL2'] 92267 20435 RLKTAAAAAA True PC9_epitope_Rep6 942.5610638750998 942.55996993586 91.311 2 -0.8982333310858952 0.27684484717488295 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 110255 6596 TERKYNLK True H1975_Epitope_Rep3 1050.5821932425 1050.58108993586 30.325 2 -0.8982498643032054 0.2768787408556861 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 79686 16786 PDSFNIPGSS True PC9_epitope_Rep3 1019.45598966987 1019.45488993586 69.715 2 -0.8982694633750351 0.2768787408556861 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 120117 5228 VEAARRYVQFM True H1975_Epitope_Rep3 1368.6972400780799 1368.6961499358601 25.195 2 -0.8982928842130941 0.27688492338385656 1.0 ['ENSG00000115850|ENST00000264162|LCT'] 134215 14888 VYMDWYEKF True NCI_RA007_Epitope_Rep3 1279.5583465634297 1279.55724993586 65.993 2 -0.8982956382779775 0.27688492338385656 1.0 ['ENSG00000144028|ENST00000323853|SNRNP200', 'SNRNP200|p.A1658Pfs*4|1|0.11|ENSG00000144028|chr2:96281867-96281867|A/-|frameshift_variant', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 30612 13571 GAKELLLRDL True PC9_epitope_Rep2 1126.6710082468999 1126.66990993586 57.494 2 -0.8983747164626126 0.27690879618725667 1.0 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B'] 1337 9360 AEDVQDDEVR True H1975_Epitope_Rep3 1174.5102100707 1174.5091099358601 41.003 2 -0.8984758674066469 0.27692883168700905 1.0 ['ENST00000456608.1_1_13:20137731-20137932:-|nuORF'] 65642 7069 LSAKAAQA True PC9_epitope_Rep1 758.4286527232199 758.42754993586 31.998 2 -0.898513899036604 0.27692883168700905 1.0 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 45028 13078 IPFMYLFSI True PC9_epitope_Rep1 1129.58819013973 1129.5865349037902 55.172 3 -0.8985475958748074 0.27693884902053145 1.0 ['ENST00000472054.2_1_6:142738255-142764649:+|nuORF', 'nc|ENSG00000112414|Q86SQ4-2|ADGRG6', 'nc|ENSG00000112414|Q86SQ4|ADGRG6', 'nc|ENSG00000112414|Q86SQ4-4|ADGRG6', 'ENSG00000112414|ENST00000367609|ADGRG6'] 59832 11431 LGFDIGKV True NCI_RA007_Epitope_Rep2 847.4803539429099 847.47924993586 49.055 2 -0.8986552231782526 0.2769488660765 1.0 ['ENST00000298569.8_1_5:175774508-175774583:-|nuORF'] 130335 8181 VSKLIQDNV True NCI_RA007_Epitope_Rep4 1014.57095985246 1014.56986993586 38.255 2 -0.8986816812961522 0.2769550460622013 1.0 ['DNAH1|p.E1509D|1|0.13|ENSG00000114841|chr3:52360035-52360035|G/C|missense_variant'] 63492 14221 LLWWGWVL True PC9_epitope_Rep4 1071.59057309823 1071.58946993586 62.609 2 -0.8987241691261411 0.2769550460622013 1.0 ['nc|ENSG00000146276|P24046-2|GABRR1', 'ENSG00000146276|ENST00000454853|GABRR1'] 69533 11205 LVDCSVALAKP True H1975_Epitope_Rep3 1114.60563110902 1114.60452993586 48.199 2 -0.8989173249358482 0.27700278443487053 1.0 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000494984.5_1_3:49133464-49135940:-|nuORF', 'ENST00000459870.6_1_3:49133464-49135556:-|nuORF', 'ENST00000482248.7_1_3:49133464-49135771:-|nuORF'] 133260 22107 VVTLLSNY True PC9_epitope_Rep6 907.50148331031 907.50038993586 97.976 2 -0.8989436764828135 0.27700278443487053 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 94603 12564 RRTDMLGHVRR True H1975_Epitope_Rep1 1395.76296865247 1395.7618699358602 53.372 2 -0.8990463029096868 0.2770228151103354 1.0 ['ENSG00000121486|ENST00000367506|TRMT1L', 'nc|ENSG00000121486|Q7Z2T5-2|TRMT1L'] 122535 18566 VGESKFFLCQV True PC9_epitope_Rep5 1255.6270948295899 1255.6254449037901 76.439 3 -0.8990470430275835 0.2770228151103354 1.0 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-5|NCAM1', 'nc|ENSG00000149294|P13591-4|NCAM1', 'nc|ENSG00000149294|P13591-1|NCAM1', 'ENSG00000149294|ENST00000316851|NCAM1', 'nc|ENSG00000149294|P13591-6|NCAM1', 'NCAM1|p.L418Afs*64|1|0.58|ENSG00000149294|chr11:113232176-113232177|-/A|frameshift_variant'] 123014 20461 VGIISIPLK True PC9_epitope_Rep1 938.6164534929 938.61534993586 83.515 2 -0.8990490009383345 0.2770466823659787 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 142060 27235 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 113.94 3 -0.8990928510564673 0.2770667109929078 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 88076 17547 QRRIRRHKNYL True PC9_epitope_Rep4 1538.9018450837798 1538.90020490379 75.51 3 -0.8991061235782887 0.2770667109929078 1.0 ['AMFR|p.M380Vfs*3|1|0.07|ENSG00000159461|chr16:56389322-56389323|AT/-|frameshift_variant', 'ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 122311 20774 VGCCSSGG True H1975_Epitope_Rep3 668.2257961363599 668.22524496793 86.795 1 -0.8991498763296061 0.27706904910312347 1.0 ['LCE1C|p.G65V|1|0.28|ENSG00000197084|chr1:152805285-152805285|C/A|missense_variant'] 140456 26705 YRHRRKYF True PC9_epitope_Rep1 1224.6628436050398 1224.6617499358601 108.56 2 -0.8991644622334131 0.27706904910312347 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 37377 13429 GVSLGAIF True PC9_epitope_Rep5 762.4275900940601 762.42648993586 56.67 2 -0.8991791756358541 0.27706904910312347 1.0 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 83154 9737 PSSALSHQGWK True NCI_RA007_Epitope_Rep1 1196.59382055536 1196.59272993586 41.876 2 -0.8992285313174638 0.2770790625519419 1.0 ['nc|ENSG00000231028|P0C7V0|AHI1-DT'] 8802 7149 AVDSADRSPR True NCI_RA007_Epitope_Rep1 1072.52613491836 1072.5250299358602 31.799 2 -0.8993023759116653 0.2771329639889197 1.0 ['nc|ENSG00000159023|P11171-4|EPB41', 'nc|ENSG00000159023|P11171-6|EPB41', 'nc|ENSG00000159023|P11171-3|EPB41', 'nc|ENSG00000159023|P11171-5|EPB41', 'nc|ENSG00000159023|P11171-2|EPB41', 'ENSG00000159023|ENST00000343067|EPB41', 'nc|ENSG00000159023|P11171-7|EPB41'] 122387 8518 VGDNRVVL True PC9_epitope_Rep3 870.4923156089399 870.49120993586 37.722 2 -0.8993047637835251 0.2771329639889197 1.0 ['ENSG00000117983|ENST00000529681|MUC5B'] 30610 7068 GAKEKNHQLYK True H1975_Epitope_Rep1 1314.7044336335 1314.7033299358602 32.218 2 -0.8993255989507607 0.2771329639889197 1.0 ['ENSG00000158669|ENST00000396987|GPAT4'] 1808 9201 AEHPSLATPP True H1975_Epitope_Rep3 1018.5083595959 1018.50726993586 40.384 2 -0.8993573404215179 0.2771329639889197 1.0 ['ENSG00000124203|ENST00000371030|ZNF831'] 80623 6392 PGRTSDSPW True PC9_epitope_Rep4 1001.4566583762099 1001.45556993586 31.677 2 -0.8995690874612854 0.2772260772011468 1.0 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5', 'ENST00000522327.1_1_8:103372297-103373424:-|nuORF'] 132434 25682 VVAVAGTIIL True PC9_epitope_Rep1 954.61136811246 954.61026993586 103.82 2 -0.899650267005487 0.2772460978075703 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 132437 25611 VVAVAGTIIL True PC9_epitope_Rep5 954.61136811246 954.61026993586 103.84 2 -0.8996666060223183 0.2772460978075703 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 57096 17235 LDSQMTHPEV True PC9_epitope_Rep5 1155.5230236838702 1155.52192993586 71.311 2 -0.8997003026601263 0.27724842810846745 1.0 ['ZNF304|p.A246P|2|0.42|ENSG00000131845|chr19:57356605-57356605|G/C|missense_variant'] 132431 23759 VVAVAGTIIL True NCI_RA007_Epitope_Rep4 954.61136811246 954.61026993586 103.01 2 -0.8997048085958171 0.27724842810846745 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 123182 16547 VGLAVFLIYKF True NCI_RA007_Epitope_Rep3 1268.7532813188798 1268.75218993586 72.879 2 -0.8997216023726703 0.27724842810846745 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 81754 16754 PLPHIAVL True PC9_epitope_Rep6 858.5327238689399 858.53162993586 76.935 2 -0.8997420902477199 0.27728613569321536 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 105907 4716 SSRQYLRYRY True H1975_Epitope_Rep3 1390.7105816430999 1390.7089349037901 23.265 3 -0.899817411354524 0.27732000166184273 1.0 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000469599.6_1_Y:21877495-21878275:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 135194 17007 WERPNFNIK True NCI_RA007_Epitope_Rep1 1202.6196413803798 1202.61854993586 70.28 2 -0.8998192898652693 0.27732000166184273 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 45809 10427 ISDDIPLQLVT True NCI_RA007_Epitope_Rep2 1212.66016877968 1212.65906993586 45.15 2 -0.8998477167351202 0.27734385819138624 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 70637 26092 LWHIWRERN True NCI_RA007_Epitope_Rep5 1308.68397297244 1308.68233490379 107.94 3 -0.8998893902988646 0.27735619132024264 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant'] 25174 6833 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 33.502 2 -0.8998978964296775 0.27735619132024264 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25102 3263 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 18.227 2 -0.8999347505790757 0.27735619132024264 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 88375 5129 QSLEARAAPG True PC9_epitope_Rep1 998.5145076054998 998.51340993586 24.581 2 -0.899962163723712 0.27735619132024264 1.0 ['ENST00000483681.5_2_3:58196572-58200114:-|nuORF'] 69909 6814 LVIRDAQREDE True H1975_Epitope_Rep3 1342.6840921117398 1342.6829899358602 31.163 2 -0.8999683853989608 0.277357001426178 1.0 ['nc|ENSG00000161643|A6NMB1|SIGLEC16', 'SIGLEC11|p.L421Cfs*102|1|0.1|ENSG00000161640|chr19:49958745-49958746|-/GACCCCGGGCA|frameshift_variant', 'nc|ENSG00000161640|Q96RL6-2|SIGLEC11', 'ENSG00000161640|ENST00000447370|SIGLEC11'] 3719 5731 AGSAYFRSL True PC9_epitope_Rep1 970.4872302284999 970.48612993586 26.863 2 -0.8999697234732539 0.277357001426178 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'nc|ENSG00000149243|Q6PF15-2|KLHL35'] 37032 13515 GVPENFNEAKP True NCI_RA007_Epitope_Rep5 1200.5775017848798 1200.57586490379 58.672 3 -0.8999745732334713 0.277357001426178 1.0 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 131788 16385 VTQDAPIP True PC9_epitope_Rep2 839.4388830537499 839.43778993586 68.271 2 -0.9000301133462767 0.277357001426178 1.0 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 88391 22843 QSLIPFVQL True PC9_epitope_Rep2 1043.60153170475 1043.60097496793 93.356 1 -0.9000430661296028 0.277357001426178 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 105543 16415 SSCDPLGVV True NCI_RA007_Epitope_Rep1 875.40586867331 875.40476993586 67.964 2 -0.9000475806762166 0.277357001426178 1.0 ['ENST00000521209.6_1_8:10108126-10108276:+|nuORF'] 59756 11541 LGEASTMVRP True NCI_RA007_Epitope_Rep1 1059.5382798251899 1059.5371899358602 48.859 2 -0.9001046465134998 0.277357001426178 1.0 ['ENST00000299084.8_1_15:38545205-38545376:+|nuORF'] 132433 25056 VVAVAGTIIL True NCI_RA007_Epitope_Rep5 954.61136811246 954.61026993586 103.88 2 -0.9001595021673695 0.27738085347954916 1.0 ['EPHA7|p.E591Kfs*38|1|0.39|ENSG00000135333|chr6:93263887-93263887|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 87168 7195 QPFPQWQQR True PC9_epitope_Rep5 1213.59924028897 1213.5976049037902 32.641 3 -0.9002197614822496 0.27738317757009345 1.0 ['ENST00000589258.1_1_18:33077719-33077869:-|nuORF'] 141720 22098 YTVRTLLR True NCI_RA007_Epitope_Rep4 1020.6080140675199 1020.60690993586 95.834 2 -0.9002467532509221 0.27738317757009345 1.0 ['ENST00000307533.10_1_4:6676966-6677095:+|nuORF'] 125388 5454 VISAFWPSL True H1975_Epitope_Rep3 1018.5487678559 1018.54766993586 26.035 2 -0.9002526636252111 0.27738317757009345 1.0 ['ENST00000296380.8_1_1:40974436-40975435:+|nuORF', 'ENST00000415550.5_2_1:40974549-40975435:+|nuORF'] 15977 8522 EDREIKLV True H1975_Epitope_Rep2 1000.5553097883198 1000.55420993586 37.735 2 -0.900276623293229 0.2773931825104533 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 38175 20160 HDLRFVRL True PC9_epitope_Rep3 1054.60359739342 1054.60250993586 82.799 2 -0.9003200574039731 0.27742703660630225 1.0 ['nc|ENSG00000159403|P00736|C1R', 'ENSG00000159403|ENST00000647956|C1R'] 137612 3421 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 17.206 3 -0.9003342213899223 0.27742703660630225 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'RNF213|p.A949Rfs*39|1|0.23|ENSG00000173821|chr17:80317221-80317221|G/-|frameshift_variant', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 112578 21186 TLELRQRLLQ True PC9_epitope_Rep4 1268.75646920636 1268.75536993586 89.655 2 -0.9004071197123056 0.27744320305685927 1.0 ['ENST00000585104.1_1_17:62477530-62481889:-|nuORF'] 79742 13168 PDYSSSTYL True H1975_Epitope_Rep2 1031.44475627983 1031.44417496793 55.775 1 -0.9004287516560934 0.27744320305685927 1.0 ['ENSG00000135093|ENST00000257548|USP30'] 6310 13224 APRLRPLQRH True NCI_RA007_Epitope_Rep4 1242.7421565549 1242.74050490379 57.992 3 -0.9004798506959625 0.27744320305685927 1.0 ['ENST00000447648.6_1_7:97846532-97846739:-|nuORF'] 138989 18405 YKRHPVRPIIH True NCI_RA007_Epitope_Rep4 1414.8309715593 1414.8298699358602 79.646 2 -0.900547482044178 0.2774947391737734 1.0 ['nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 20479 10293 EPKGSYPALI True NCI_RA007_Epitope_Rep3 1073.57571087973 1073.57460993586 47.559 2 -0.9005687236356119 0.2775047416000997 1.0 ['ENST00000392238.2_1_2:203631321-203631381:+|nuORF'] 68656 18061 LTIRKRYKERY True NCI_RA007_Epitope_Rep2 1524.88888035824 1524.8877899358602 75.008 2 -0.9006006041836837 0.2775247456219284 1.0 ['ENST00000507278.5_1_4:169086345-169108582:+|nuORF', 'ENSG00000109511|ENST00000359299|ANXA10'] 15460 11677 EALLSNIVKPV True H1975_Epitope_Rep1 1181.70197402201 1181.70086993586 49.905 2 -0.9006163868323984 0.2775247456219284 1.0 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 142064 27732 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 116.65 3 -0.9007597280911086 0.2776039647821031 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 88072 12174 QRRHHRRWREP True H1975_Epitope_Rep1 1612.8671909105597 1612.8660899358601 51.846 2 -0.9007868111955939 0.277613965142517 1.0 ['ENSG00000132716|ENST00000368074|DCAF8'] 95442 25086 RWHSLPPSPL True PC9_epitope_Rep1 1188.64037682496 1188.63874490379 101.38 3 -0.9008429835167496 0.27763396503273857 1.0 ['ENST00000589123.5_2_19:3465565-3466177:+|nuORF'] 79031 6723 PALHSENP True PC9_epitope_Rep3 863.41373093507 863.41262993586 30.881 2 -0.9008772861971048 0.27763396503273857 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 55832 16842 LAPLAQRL True PC9_epitope_Rep3 880.54943656224 880.54832993586 69.936 2 -0.9008965737518548 0.27764396456256923 1.0 ['nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2'] 117556 6602 TVSHYQREKKR True NCI_RA007_Epitope_Rep2 1430.7742445288197 1430.7731499358601 30.288 2 -0.900923075142594 0.2776539638155618 1.0 ['ENSG00000101605|ENST00000356443|MYOM1', 'nc|ENSG00000101605|P52179-2|MYOM1'] 136151 22325 WRRGRKRDRGL True NCI_RA007_Epitope_Rep2 1454.8443302076598 1454.84322993586 92.741 2 -0.9009666527905548 0.27766011931951884 1.0 ['ENST00000311151.9_2_8:26435550-26439510:+|nuORF'] 57871 15189 LEFGFDKY True H1975_Epitope_Rep2 1017.4807478657299 1017.47964993586 63.581 2 -0.9009794020101107 0.27766011931951884 1.0 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT'] 67780 9576 LSYSLQTP True H1975_Epitope_Rep1 907.4650978015899 907.46400993586 41.758 2 -0.9010660487351756 0.27766783376465215 1.0 ['ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-9|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7', 'ENST00000557058.1_1_12:56089304-56090183:-|nuORF'] 25182 26421 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 112.18 2 -0.901134284324646 0.27766783376465215 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 5654 3250 APAATFKSP True NCI_RA007_Epitope_Rep5 888.4705175352 888.46942993586 17.953 2 -0.9011827072140112 0.27766783376465215 1.0 ['ENST00000381962.3_1_20:629097-629349:-|nuORF'] 131321 18417 VTGKEYSV True PC9_epitope_Rep5 881.44944773745 881.44834993586 75.861 2 -0.901199226291179 0.27766783376465215 1.0 ['ENST00000552656.5_1_12:56610319-56615704:-|nuORF', 'ENST00000345093.8_1_12:56610319-56615573:-|nuORF'] 87582 23888 QQLLLLGGGG True NCI_RA007_Epitope_Rep4 954.5498304850598 954.54872993586 103.62 2 -0.9012205653230564 0.27766783376465215 1.0 ['ENSG00000168806|ENST00000305641|LCMT2', 'ENST00000567039.1_1_15:43620629-43622752:-|nuORF'] 60026 11148 LGKLKPNTP True PC9_epitope_Rep4 966.5862159937799 966.58510993586 50.66 2 -0.9012579456908153 0.27766783376465215 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 123836 10708 VGRPDKEEL True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 46.077 2 -0.9012583642728215 0.27766783376465215 1.0 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'nc|ENSG00000135931|Q7Z3E5-2|ARMC9', 'ENSG00000135931|ENST00000611582|ARMC9'] 112440 12339 TLDDIFEQW True PC9_epitope_Rep6 1165.52915461013 1165.52749490379 58.864 3 -0.9012685351944862 0.27766783376465215 1.0 ['nc|ENSG00000132906|P55211-2|CASP9', 'nc|ENSG00000132906|P55211-4|CASP9', 'ENSG00000132906|ENST00000333868|CASP9'] 94774 23813 RSLRIEKFFAF True PC9_epitope_Rep3 1412.7928547150798 1412.79174993586 96.882 2 -0.9012725141980745 0.27766783376465215 1.0 ['ENSG00000090857|ENST00000288050|PDPR', 'nc|ENSG00000090857|Q8NCN5-2|PDPR'] 138546 23767 YHYRLDWLMWF True NCI_RA007_Epitope_Rep2 1628.7598403346399 1628.7587499358601 99.762 2 -0.9012823160567531 0.27766783376465215 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 88031 5862 QRPQPLCV True PC9_epitope_Rep6 939.4960210903898 939.49492993586 30.781 2 -0.9012842756419485 0.27766783376465215 1.0 ['ENST00000402198.5_1_3:9519522-9519681:+|nuORF'] 84027 18735 PVTVPVATT True PC9_epitope_Rep4 883.50148331031 883.5009349679301 80.147 1 -0.9012849117168296 0.27766783376465215 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 64030 8161 LPAGRLHPA True NCI_RA007_Epitope_Rep3 930.5399345077 930.53882993586 39.219 2 -0.9013055753000351 0.27766783376465215 1.0 ['ENST00000447098.6_1_1:45291946-45292617:-|nuORF'] 104104 13306 SQDYVLTY True H1975_Epitope_Rep3 987.4549270407099 987.4543749679301 56.439 1 -0.9013327807075442 0.27766783376465215 1.0 ['ENSG00000134762|ENST00000360428|DSC3'] 96780 10057 SAPTGTIPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43833496793 45.529 1 -0.9013840859470835 0.27766783376465215 1.0 ['ENSG00000184956|ENST00000421673|MUC6'] 33132 10634 GISPGARK True H1975_Epitope_Rep1 784.4555361774 784.45498496793 45.861 1 -0.9013969158412615 0.27766783376465215 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 23355 14266 EVRLPPPPD True PC9_epitope_Rep1 1018.5447451046199 1018.54364993586 59.698 2 -0.9014055206881827 0.2776739873514067 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'FXR1|p.K274Rfs*23|1|0.18|ENSG00000114416|chr3:180953776-180953776|A/-|frameshift_variant', 'ENST00000479176.5_1_3:180630473-180665760:+|nuORF'] 45728 8560 IRTAVRQQLQK True NCI_RA007_Epitope_Rep4 1339.8048163811102 1339.80370993586 39.712 2 -0.9014088112833407 0.2776739873514067 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 81515 16342 PLGVRGRG True H1975_Epitope_Rep3 810.4824196315799 810.48187496793 68.334 1 -0.9015187859535648 0.2776839832830533 1.0 ['ENST00000257897.7_2_12:58119581-58120334:-|nuORF'] 2788 5072 AETWMDEFAE True H1975_Epitope_Rep3 1227.47540478511 1227.4743099358602 24.627 2 -0.9015486424549183 0.27770397431639543 1.0 ['nc|ENSG00000174473|Q49A17-2|GALNTL6', 'ENSG00000174473|ENST00000506823|GALNTL6'] 135426 12938 WHLPPCPVPPG True PC9_epitope_Rep4 1198.59573513166 1198.5940949037902 57.651 3 -0.9016086053955283 0.27770397431639543 1.0 ['ENST00000527357.5_1_11:799959-801918:-|nuORF'] 102345 6538 SLSTPLGK True NCI_RA007_Epitope_Rep1 801.45961849833 801.45852993586 29.445 2 -0.9017240878806329 0.2777516397752747 1.0 ['ENST00000468045.5_1_2:27356354-27356477:-|nuORF'] 68567 8837 LTGTCETEAYW True NCI_RA007_Epitope_Rep4 1272.5332540144 1272.5321499358602 40.801 2 -0.9017279254606535 0.2777516397752747 1.0 ['ENSG00000221963|ENST00000409652|APOL6'] 124351 12416 VGTTTGQG True PC9_epitope_Rep3 719.34498266891 719.34443496793 52.787 1 -0.9018494194212088 0.2777754715153528 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10'] 34 6944 AAAAQEPL True NCI_RA007_Epitope_Rep4 769.39701824177 769.39646496793 33.335 1 -0.9019115760826879 0.2777993025958931 1.0 ['ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF', 'SPEN-CERS4|1|fusion', 'ENST00000599275.1_1_19:8326515-8326990:+|nuORF'] 17076 13994 EGILDAIMVWF True H1975_Epitope_Rep3 1292.6474959209997 1292.64638993586 59.147 2 -0.90194797780375 0.2778215931260637 1.0 ['nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 23374 19793 EVRSCPKAYP True PC9_epitope_Rep3 1148.5648289261999 1148.56372993586 81.365 2 -0.9019791713535747 0.2778215931260637 1.0 ['GON4L|p.S2010Y|1|0.29|ENSG00000116580|chr1:155752404-155752404|G/T|missense_variant'] 141691 19856 YTTRKPVSL True PC9_epitope_Rep5 1063.60259433391 1063.6014899358602 81.426 2 -0.9019956330434761 0.2778215931260637 1.0 ['ENSG00000095203|ENST00000374566|EPB41L4B'] 61774 5422 LLALHSAA True PC9_epitope_Rep4 794.4650382319401 794.46394993586 27.587 2 -0.902083803773452 0.2778215931260637 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 79573 18833 PDGKIQVKAI True PC9_epitope_Rep1 1067.63389446219 1067.63278993586 77.226 2 -0.902096589839187 0.2778215931260637 1.0 ['nc|ENSG00000089091|Q9NVP4-3|DZANK1', 'nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1'] 77056 24587 NRKFPRRRR True NCI_RA007_Epitope_Rep5 1284.7751880186797 1284.77408993586 102.05 2 -0.9021891796221119 0.2778554133517814 1.0 ['ENST00000287934.3_1_7:90894005-90894200:+|nuORF'] 60073 16468 LGLKAELG True PC9_epitope_Rep5 799.4803539429099 799.47980496793 68.343 1 -0.9022097176464379 0.2778554133517814 1.0 ['ENST00000417753.5_1_3:48557182-48594149:-|nuORF'] 46744 7293 ITEM[Oxidation]EPSPVEI True H1975_Epitope_Rep3 1259.5955202982298 1259.59442993586 33.027 2 -0.9022579208599941 0.2778615603857382 1.0 ['ENSG00000205108|ENST00000378788|FAM205A', 'nc|ENSG00000257198|Q63HN1|SPATA31F2P'] 120089 5974 VDVMARHVVQP True NCI_RA007_Epitope_Rep1 1249.6601262933698 1249.6584749037902 27.283 3 -0.9023114575328359 0.2778615603857382 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 36979 5309 GVNAFRRGAQR True NCI_RA007_Epitope_Rep1 1230.6693855374597 1230.66828993586 24.732 2 -0.9023238212635921 0.27787155150944964 1.0 ['ENST00000486440.5_1_7:100203133-100203232:+|nuORF'] 24979 1061 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 5.7518 2 -0.9023818320017843 0.2779053680132817 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 60855 23795 LHVRGRRHRLQ True PC9_epitope_Rep1 1426.8494155880999 1426.84830993586 96.325 2 -0.9023861270645296 0.2779053680132817 1.0 ['ENSG00000105278|ENST00000262961|ZFR2'] 110581 22909 TFRRNIRKFVP True PC9_epitope_Rep6 1432.8415362429998 1432.8404299358601 101.23 2 -0.9024038559727342 0.2779115132398107 1.0 ['ENSG00000172139|ENST00000305815|SLC9C1', 'nc|ENSG00000172139|Q4G0N8-2|SLC9C1'] 85088 23080 QEKRKLSV True PC9_epitope_Rep1 986.5872786229398 986.58618993586 93.58 2 -0.9024058533646275 0.2779115132398107 1.0 ['ENSG00000197798|ENST00000533050|FAM118B'] 137611 3333 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 16.859 3 -0.9024541204553874 0.27793533749290983 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'RNF213|p.A949Rfs*39|1|0.23|ENSG00000173821|chr17:80317221-80317221|G/-|frameshift_variant', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 138006 22450 YFSVAHFS True NCI_RA007_Epitope_Rep5 956.43921740692 956.43812993586 93.525 2 -0.9025019806600013 0.2779637570895006 1.0 ['ENST00000216024.6_1_22:38964257-38966082:-|nuORF'] 137906 4717 YEWWFRWRLDR True NCI_RA007_Epitope_Rep2 1711.8371791385496 1711.8355349037902 22.976 3 -0.9025073187030237 0.2779637570895006 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 12675 6451 DLDPVSEDP True H1975_Epitope_Rep3 985.42402083525 985.42347496793 29.788 1 -0.9025647666246801 0.2779637570895006 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 30382 10234 GADRPFHLSAR True H1975_Epitope_Rep3 1225.63160304641 1225.6305099358601 44.413 2 -0.9025776649572296 0.2779637570895006 1.0 ['ENSG00000147119|ENST00000276055|CHST7'] 22424 10083 ETERAFLLSP True H1975_Epitope_Rep3 1161.6029882567298 1161.60188993586 43.823 2 -0.9025920379165268 0.2779637570895006 1.0 ['ENST00000381312.5_1_10:1779465-1779666:-|nuORF'] 135161 19213 WELVVRCRS True NCI_RA007_Epitope_Rep5 1146.59679776082 1146.59515490379 80.767 3 -0.9026172719086608 0.2779637570895006 1.0 ['ENST00000484317.5_1_X:153996624-153996699:+|nuORF'] 47075 15345 ITSRTKLSSI True PC9_epitope_Rep1 1104.65027280232 1104.64916993586 63.843 2 -0.9026173931080824 0.2779637570895006 1.0 ['ENSG00000168631|ENST00000462446|MUCL3', 'nc|ENSG00000168631|Q3MIW9-2|MUCL3', 'nc|ENSG00000168631|Q3MIW9|MUCL3'] 94168 19532 RRPGPGGK True PC9_epitope_Rep6 823.4776686043099 823.47656993586 87.794 2 -0.902623865887747 0.2779737450028358 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A'] 36686 5162 GVIRTDPSWL True NCI_RA007_Epitope_Rep3 1142.6084079903399 1142.6067749037902 27.298 3 -0.9027809093826598 0.27802523100758036 1.0 ['ENST00000551178.5_2_17:3576816-3577080:-|nuORF'] 94576 20522 RRRYLRRKER True NCI_RA007_Epitope_Rep5 1487.9021794369498 1487.90053490379 85.879 3 -0.9028033337265295 0.2780452043046449 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 87320 3813 QPRDYSGENP True NCI_RA007_Epitope_Rep2 1161.50506512061 1161.5034149037901 19.465 3 -0.9028243436360532 0.2780452043046449 1.0 ['ENSG00000204920|ENST00000270014|ZNF155', 'nc|ENSG00000204920|Q12901-2|ZNF155'] 113727 16390 TLYWLFHRPLK True H1975_Epitope_Rep3 1472.8292402237996 1472.8281499358602 68.518 2 -0.9028679389562342 0.27805519053876476 1.0 ['ENSG00000171017|ENST00000306708|LRRC8E'] 73971 20581 NCSGGDDD True NCI_RA007_Epitope_Rep1 781.21846182645 781.21791496793 84.279 1 -0.9029033673964416 0.27807516217823697 1.0 ['ENSG00000161011|ENST00000389805|SQSTM1', 'nc|ENSG00000161011|Q13501-2|SQSTM1'] 97791 11285 SELDQAKLE True PC9_epitope_Rep1 1031.51350454599 1031.5124099358602 48.287 2 -0.9029197178199808 0.27807516217823697 1.0 ['ENSG00000183763|ENST00000331456|TRAIP', 'ENST00000473195.5_1_3:49866538-49882012:-|nuORF'] 87117 13062 QNTVEVAQFI True H1975_Epitope_Rep3 1147.5873381925899 1147.58624993586 55.484 2 -0.9029930600054021 0.27809513271276226 1.0 ['CON__Q29RQ1'] 120318 8225 VEEAAEGVLR True H1975_Epitope_Rep1 1071.5560380643099 1071.5549499358601 36.581 2 -0.9030151777155497 0.27809513271276226 1.0 ['ENSG00000169871|ENST00000306085|TRIM56', 'nc|ENSG00000169871|Q9BRZ2-2|TRIM56'] 55793 19555 LANKSITYQMF True PC9_epitope_Rep2 1314.6642086143 1314.66256490379 80.601 3 -0.9030659600378178 0.27810127107508886 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 60176 17124 LGPAPYDP True PC9_epitope_Rep3 828.40176926904 828.40066993586 71.022 2 -0.903072030825201 0.27810127107508886 1.0 ['ENST00000491755.5_1_1:46087308-46087964:-|nuORF', 'ENST00000482416.5_1_1:46087308-46089051:-|nuORF', 'nc|ENSG00000159588|Q96LX7-2|CCDC17', 'nc|ENSG00000159588|Q96LX7-5|CCDC17', 'ENSG00000159588|ENST00000528266|CCDC17'] 104616 20696 SQRWRLQLRRR True NCI_RA007_Epitope_Rep5 1553.9127441206497 1553.9110949037902 86.567 3 -0.9030883032593465 0.27810740909782444 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 42224 8417 IDSILEVVQT True NCI_RA007_Epitope_Rep4 1115.60740493083 1115.60630993586 39.189 2 -0.9031062541991421 0.27810740909782444 1.0 ['ENSG00000105926|ENST00000222644|PALS2'] 42129 9416 IDNLDTRLPRI True PC9_epitope_Rep2 1324.74629844548 1324.7446649037902 41.558 3 -0.9031937147257497 0.2781434972617138 1.0 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-3|SUV39H2'] 110556 7083 TFQAHRDKYEK True H1975_Epitope_Rep1 1421.7051619094898 1421.7040699358602 32.271 2 -0.9032224273752391 0.2781434972617138 1.0 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 98659 764 SGCACGCGCE True NCI_RA007_Epitope_Rep1 888.2234302612 888.22232993586 4.0602 2 -0.9032241449999796 0.2781434972617138 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 25098 26319 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 111.81 2 -0.9032339145018504 0.2781434972617138 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57254 10415 LDWWEPELGV True H1975_Epitope_Rep1 1242.5920892198599 1242.59098993586 45.013 2 -0.9032423098491653 0.2781434972617138 1.0 ['ENST00000395011.5_1_10:72060408-72060609:-|nuORF'] 25188 19974 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 81.881 2 -0.9032898864110207 0.2781496335223344 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 101580 7154 SLLNDAVTV True PC9_epitope_Rep3 930.5022115863 930.50110993586 32.53 2 -0.9032925860674424 0.2781496335223344 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENST00000564812.5_1_16:67286693-67289803:+|nuORF', 'ENST00000564704.5_1_16:67272241-67289541:+|nuORF', 'ENSG00000135740|ENST00000299798|SLC9A5', 'nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 73972 20251 NCSGGDDD True NCI_RA007_Epitope_Rep5 781.21846182645 781.21791496793 84.836 1 -0.9034100698775146 0.2782425910304103 1.0 ['ENSG00000161011|ENST00000389805|SQSTM1', 'nc|ENSG00000161011|Q13501-2|SQSTM1'] 142045 21592 YVLMLNLF True NCI_RA007_Epitope_Rep5 1011.54632532775 1011.54522993586 90.139 2 -0.9034817300847694 0.27824944690265485 1.0 ['nc|ENSG00000180116|Q86WS4-3|REDIC1'] 94779 23354 RSMHAYQRE True NCI_RA007_Epitope_Rep5 1176.54582481712 1176.54418490379 97.12 3 -0.90350477674425 0.27824944690265485 1.0 ['ENSG00000139437|ENST00000405876|TCHP', 'ENST00000537218.1_1_12:110338138-110342619:+|nuORF'] 112857 22359 TLKEVEEL True PC9_epitope_Rep5 959.5175272972699 959.51642993586 91.013 2 -0.903517082225562 0.27824944690265485 1.0 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 95417 4877 RWFLYPPEK True NCI_RA007_Epitope_Rep5 1234.6498788794995 1234.6482449037899 25.453 3 -0.9035346246900954 0.27824944690265485 1.0 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000569441.5_1_16:732796-733478:-|nuORF', 'ENST00000568689.5_1_16:732830-733478:-|nuORF', 'ENST00000565302.5_1_16:732919-733769:-|nuORF'] 121509 9055 VEYTFTGI True NCI_RA007_Epitope_Rep3 928.4541987647199 928.45310993586 42.709 2 -0.9035446467825957 0.27824944690265485 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'SCN8A|p.E294*|1|0.28|ENSG00000196876|chr12:51699740-51699741|-/T|frameshift_variant', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.D586Tfs*55|1|0.06|ENSG00000136531|chr2:165323239-165323239|G/-|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 93128 25356 RPPGGGGG True H1975_Epitope_Rep3 653.32452200785 653.3239749679301 105.46 1 -0.9035449471129465 0.27824944690265485 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 64856 4920 LQDPVPKE True NCI_RA007_Epitope_Rep1 924.4916469026 924.49054993586 23.218 2 -0.9035859009493035 0.27824944690265485 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 45662 12685 IRHFMELV True PC9_epitope_Rep5 1043.5586213469498 1043.55807496793 53.799 1 -0.9035944303085877 0.27824944690265485 1.0 ['ENST00000498078.1_1_13:41303510-41323454:-|nuORF', 'ENSG00000102738|ENST00000323563|MRPS31'] 132001 6867 VTSPKTEEPV True NCI_RA007_Epitope_Rep2 1085.56045473841 1085.5593499358602 31.327 2 -0.9035963232770354 0.27824944690265485 1.0 ['ENST00000474820.5_1_2:161129788-161130004:-|nuORF'] 30937 21154 GARHGRGG True PC9_epitope_Rep5 766.3946672563399 766.39411496793 86.422 1 -0.9036239940846376 0.2782755378574194 1.0 ['ENST00000269221.7_1_18:21083527-21083671:+|nuORF', 'ENST00000294309.7_2_11:68855463-68855787:+|nuORF'] 107455 7164 SVLVRQISL True NCI_RA007_Epitope_Rep3 1013.62332977849 1013.62222993586 35.296 2 -0.9036419356885191 0.2782755378574194 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'EP400|p.P521Rfs*17|1|0.38|ENSG00000183495|chr12:131982110-131982111|-/G|frameshift_variant', 'nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-2|EP400P1'] 79469 5852 PAVVDHRG True PC9_epitope_Rep1 849.44569976969 849.44460993586 27.323 2 -0.9036511556996114 0.2782755378574194 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 57240 7400 LDWMHYED True PC9_epitope_Rep2 1107.4331460503101 1107.43204993586 33.843 2 -0.9036534254164197 0.2782755378574194 1.0 ['ENST00000232375.7_1_3:48555264-48555390:-|nuORF'] 62751 11386 LLLPGLQTV True NCI_RA007_Epitope_Rep4 952.5957180483201 952.59462993586 50.709 2 -0.9037038883317844 0.27834695203727516 1.0 ['RIF1|p.E970Q|1|0.32|ENSG00000080345|chr2:151458863-151458863|G/C|missense_variant'] 20483 21648 EPKRTTVMSA True PC9_epitope_Rep1 1118.5753936099 1118.5742899358602 88.097 2 -0.9037757996498932 0.27834695203727516 1.0 ['ENST00000307746.8_1_4:5016818-5016872:-|nuORF'] 22359 8392 ETEDKSFFVR True NCI_RA007_Epitope_Rep5 1256.60371653272 1256.60206490379 38.956 3 -0.9037811375679653 0.27834695203727516 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 9183 14689 AVLQQHHVKL True PC9_epitope_Rep4 1171.68257599011 1171.6814699358602 64.435 2 -0.9038091165200527 0.27837075544740625 1.0 ['ENSG00000186648|ENST00000342740|CARMIL3'] 20698 9156 EQEELKKKP True H1975_Epitope_Rep1 1127.6186383208699 1127.61754993586 40.125 2 -0.9038449715890907 0.278380732486278 1.0 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 99514 9100 SIDNREEL True PC9_epitope_Rep3 974.46688870674 974.46578993586 39.942 2 -0.903887880833797 0.2784183602931011 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 18898 6859 ELEARVPE True H1975_Epitope_Rep2 941.4818104948899 941.48070993586 31.301 2 -0.9039202757633594 0.27842833639794834 1.0 ['ENSG00000176438|ENST00000682763|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4', 'nc|ENSG00000160460|Q9H254-4|SPTBN4'] 19736 17640 ELRSGIIR True NCI_RA007_Epitope_Rep1 942.5610638750999 942.5605149679301 72.751 1 -0.9040163423143122 0.27843289049863834 1.0 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 8712 14876 AVAQFKKY True PC9_epitope_Rep5 953.5334521449299 953.53234993586 62.224 2 -0.9040235840280166 0.27843289049863834 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 131362 20209 VTGTIKPSV True PC9_epitope_Rep5 900.5280324113199 900.52692993586 82.78 2 -0.90405782358529 0.27843289049863834 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 64517 20099 LPRKKLKHIRQ True H1975_Epitope_Rep2 1415.9201209168698 1415.9184749037902 83.295 3 -0.9040759435456208 0.27843289049863834 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 81317 16692 PLAILNLR True PC9_epitope_Rep5 908.58073669052 908.57962993586 69.21 2 -0.904133661875675 0.27843289049863834 1.0 ['SLITRK4|p.R500I|1|0.12|ENSG00000179542|chrX:143629610-143629610|C/A|missense_variant'] 135752 20795 WLYFFSFL True PC9_epitope_Rep1 1121.5586042636098 1121.55750993586 84.818 2 -0.9041463803574835 0.27843289049863834 1.0 ['ENSG00000196187|ENST00000366835|TMEM63A'] 136662 13622 WWRWRRGCSWK True PC9_epitope_Rep4 1605.7887894774897 1605.78768993586 60.291 2 -0.9041895566775584 0.2784428654372529 1.0 ['nc|ENSG00000148459|Q5T2R2-2|PDSS1', 'ENSG00000148459|ENST00000376215|PDSS1'] 101788 14013 SLPARQLLA True PC9_epitope_Rep5 967.58146496651 967.58036993586 58.919 2 -0.9042394512828289 0.2784666639019063 1.0 ['ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3', 'PLK3|p.S282C|1|0.15|ENSG00000173846|chr1:44803049-44803049|A/T|missense_variant'] 130492 18490 VSPRVGVR True H1975_Epitope_Rep3 868.5242844435598 868.52318993586 77.533 2 -0.9043179787727075 0.2784904617085983 1.0 ['ENST00000531214.5_1_11:797830-797989:-|nuORF'] 79503 9283 PCCSFPRT True PC9_epitope_Rep2 909.38369376009 909.38258993586 41.047 2 -0.9044121894609061 0.2785027092778945 1.0 ['ENST00000281830.3_1_2:223919256-223919388:+|nuORF'] 57110 6705 LDSVPRINP True NCI_RA007_Epitope_Rep1 1009.5556441414899 1009.55454993586 30.091 2 -0.9044334339829828 0.2785027092778945 1.0 ['ENST00000551270.1_1_12:104283206-104309165:-|nuORF'] 19895 12279 ELTRHFRK True H1975_Epitope_Rep1 1085.60941104985 1085.60830993586 52.256 2 -0.904444740007788 0.2785027092778945 1.0 ['ENSG00000109787|ENST00000261438|KLF3'] 15711 6314 EAWLSSASLQT True H1975_Epitope_Rep2 1191.5771674317098 1191.57606993586 29.222 2 -0.9044498468911721 0.2785027092778945 1.0 ['ENSG00000146830|ENST00000678049|GIGYF1'] 5869 4093 APGARATPVA True PC9_epitope_Rep4 909.5032146458099 909.50210993586 22.041 2 -0.9045344840285121 0.2785817955629276 1.0 ['ENST00000471850.1_1_3:119298548-119305161:+|nuORF', 'ENST00000357003.7_1_3:119298548-119299463:+|nuORF', 'ENST00000478399.5_1_3:119298548-119298770:+|nuORF', 'ENST00000481816.5_3_3:119298332-119299463:+|nuORF'] 15694 8988 EAVQEITEY True H1975_Epitope_Rep3 1080.49752012868 1080.4969749679299 39.567 1 -0.9045886898678068 0.2786194122688193 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 58236 17619 LELKKHLL True NCI_RA007_Epitope_Rep5 992.6382515666401 992.63714993586 74.553 2 -0.9046560178637985 0.2786200986828466 1.0 ['ENSG00000171169|ENST00000373078|NAIF1', 'NAIF1|p.N33K|1|0.18|ENSG00000171169|chr9:128067003-128067003|G/C|missense_variant', 'nc|ENSG00000171169|Q69YI7-2|NAIF1'] 16581 16554 EEMMHKTRKY True PC9_epitope_Rep5 1351.6376765966302 1351.63656993586 68.679 2 -0.9046630955573681 0.2786200986828466 1.0 ['PCLO|p.H1926R|1|0.14|ENSG00000186472|chr7:82955176-82955176|T/C|missense_variant'] 86266 10959 QIQNENLLLRQ True PC9_epitope_Rep1 1367.75211210191 1367.75100993586 47.041 2 -0.9047544846518331 0.2786200986828466 1.0 ['ENST00000566201.6_1_16:46508202-46534771:-|nuORF', 'ENST00000571006.5_1_16:46521999-46540142:-|nuORF'] 121945 12073 VFSSKGTL True NCI_RA007_Epitope_Rep5 837.4596184983299 837.45852993586 53.095 2 -0.9047735672713906 0.2786200986828466 1.0 ['ENSG00000130035|ENST00000252318|GALNT8'] 121301 13009 VETQANNLIC True H1975_Epitope_Rep1 1103.52810906431 1103.52757496793 55.122 1 -0.9048122502154698 0.2786200986828466 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 37626 7040 GVWAAVQP True NCI_RA007_Epitope_Rep5 826.4337381036598 826.43264993586 33.758 2 -0.9048369988702697 0.2786200986828466 1.0 ['ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 25183 26689 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 113.76 2 -0.904842374651376 0.2786200986828466 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 4548 16498 AKKKKKKKKG True NCI_RA007_Epitope_Rep3 1170.8288463009796 1170.82720490379 72.692 3 -0.9048999116423856 0.2786323368851666 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 114077 20192 TPFLKVEPF True PC9_epitope_Rep3 1076.5906326678798 1076.5895299358601 82.927 2 -0.9049056596222536 0.2786323368851666 1.0 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 58019 14148 LEHNPYEKFS True PC9_epitope_Rep1 1262.59315184902 1262.5920499358601 59.243 2 -0.9049090175561912 0.2786323368851666 1.0 ['ENSG00000096401|ENST00000371477|CDC5L'] 47854 14750 IYHREEKRWRW True H1975_Epitope_Rep3 1657.8589772122898 1657.8578899358602 62.112 2 -0.9049090285558985 0.2786323368851666 1.0 ['CLEC5A|p.F148Lfs*19|1|0.17|ENSG00000258227|chr7:141931728-141931728|G/-|frameshift_variant', 'nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 18730 7531 ELARFLFKPKY True H1975_Epitope_Rep1 1410.80235676962 1410.8007149037899 33.966 3 -0.9050475239756307 0.27870755538357356 1.0 ['FKBP6|p.N115K|1|0.61|ENSG00000077800|chr7:73330229-73330229|C/A|missense_variant'] 109086 2757 TALLFPPPFSP True H1975_Epitope_Rep2 1185.6433965167298 1185.6417449037901 14.633 3 -0.9050476050656119 0.27870755538357356 1.0 ['ENST00000496634.2_1_11:62341216-62341447:-|nuORF'] 9186 9757 AVLRTLRDTPM True H1975_Epitope_Rep3 1271.7019911053499 1271.70088993586 42.553 2 -0.9051338451961647 0.2787274913282017 1.0 ['ENSG00000163959|ENST00000296327|SLC51A'] 137419 5926 YEATLEEC[Carbamidomethyl]C[Carbamidomethyl]AK True H1975_Epitope_Rep1 1372.5639030785399 1372.56280993586 27.865 2 -0.9051559127224292 0.2787274913282017 1.0 ['CON__P02769'] 34954 11635 GQQVDYSIIA True PC9_epitope_Rep3 1092.54513902744 1092.5440499358601 49.77 2 -0.905238659042434 0.2787650977032144 1.0 ['NR5A2|p.A436Rfs*9|1|0.13|ENSG00000116833|chr1:200120882-200120883|-/C|frameshift_variant', 'nc|ENSG00000116833|O00482-4|NR5A2', 'nc|ENSG00000116833|O00482-2|NR5A2', 'ENSG00000116833|ENST00000367362|NR5A2', 'nc|ENSG00000116833|O00482-3|NR5A2'] 36741 6766 GVKGAKIK True PC9_epitope_Rep4 799.5279728416699 799.52686993586 33.224 2 -0.90525776209718 0.27876735991155943 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 40109 15868 HPWQVRHSRHK True NCI_RA007_Epitope_Rep2 1466.7755819415 1466.7744899358602 66.44 2 -0.9052666382381355 0.27876735991155943 1.0 ['ENST00000360862.9_2_16:3534932-3535735:+|nuORF'] 8737 6942 AVAWEAGK True NCI_RA007_Epitope_Rep1 830.4286527232198 830.42754993586 31.007 2 -0.9052677282455577 0.27876735991155943 1.0 ['ENST00000507102.5_2_4:100003111-100009857:-|nuORF', 'ENST00000508511.5_1_4:99997418-100009857:-|nuORF', 'ENSG00000197894|ENST00000296412|ADH5'] 133070 20246 VVPRGGLR True H1975_Epitope_Rep2 852.5293698239999 852.52826993586 83.899 2 -0.905275817786022 0.27879114501285135 1.0 ['ENST00000610187.1_1_9:137000377-137000500:-|nuORF'] 83964 19675 PVRTWERPLRP True PC9_epitope_Rep2 1405.79425169741 1405.7931499358601 81.067 2 -0.9053368570518663 0.2787972584567765 1.0 ['nc|ENSG00000178217|Q5SQS7-2|SH2D4B', 'nc|ENSG00000178217|Q5SQS7|SH2D4B'] 135991 6493 WQQQWQQQWRK True H1975_Epitope_Rep1 1628.79604260256 1628.7949499358601 30.036 2 -0.9053590867499948 0.2787972584567765 1.0 ['ENST00000253055.7_1_19:40718724-40719087:+|nuORF'] 132721 9911 VVHRLLSI True H1975_Epitope_Rep2 935.59163572739 935.59052993586 43.111 2 -0.90537895202146 0.27880722408766184 1.0 ['nc|ENSG00000100395|Q969R5-2|L3MBTL2', 'nc|ENSG00000100395|Q969R5-3|L3MBTL2', 'ENST00000466589.5_1_22:41601366-41623356:+|nuORF', 'ENSG00000100395|ENST00000216237|L3MBTL2', 'ENST00000479978.5_1_22:41615341-41623356:+|nuORF'] 96711 10053 SALLLWFLFW True NCI_RA007_Epitope_Rep3 1294.7114165069 1294.70977490379 46.637 3 -0.9054413956205641 0.2788862788448252 1.0 ['nc|ENSG00000188487|Q1MX18-6|INSC'] 126609 18381 VLMIRMLR True H1975_Epitope_Rep1 1030.61436240126 1030.6132699358602 76.603 2 -0.9054673899269099 0.27892387834906246 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 27276 17251 FLQKENNNTI True PC9_epitope_Rep1 1219.61970095003 1219.6186099358601 71.173 2 -0.9055681360068082 0.27896147681423755 1.0 ['nc|ENSG00000255298|Q8NG78|OR8G5'] 5925 23581 APGREGRSDW True PC9_epitope_Rep1 1129.5264692715298 1129.52536993586 95.492 2 -0.905703890305875 0.27904052616307184 1.0 ['GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 62044 10030 LLDSLDKYFQ True H1975_Epitope_Rep1 1240.6339540318402 1240.6328499358601 43.519 2 -0.9057868979454693 0.27911571675302244 1.0 ['ENST00000568495.5_1_16:67862172-67864127:-|nuORF'] 81752 18408 PLPHIAVL True PC9_epitope_Rep2 858.5327238689399 858.53162993586 76.136 2 -0.9057870406830966 0.27911571675302244 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 4211 11736 AIARKLLLM True NCI_RA007_Epitope_Rep2 1027.65760711223 1027.6565099358602 50.247 2 -0.905839262608408 0.27913402688550865 1.0 ['ENSG00000204361|ENST00000389586|NXPE2', 'nc|ENSG00000204361|Q96DL1-3|NXPE2'] 44501 16729 ILLLFWIIFY True NCI_RA007_Epitope_Rep2 1339.79441785487 1339.7933299358601 69.803 2 -0.9058405521668146 0.27913402688550865 1.0 ['ENST00000374024.3_1_1:27721873-27722296:+|nuORF'] 109445 6917 TDIYFWRLWGP True NCI_RA007_Epitope_Rep2 1452.7190210684798 1452.7173749037902 31.526 3 -0.9058955961307441 0.27913402688550865 1.0 ['nc|ENSG00000186111|O60331-2|PIP5K1C'] 62289 20406 LLFRWWRRR True PC9_epitope_Rep1 1387.81017654507 1387.8090699358602 83.304 2 -0.9058976139448857 0.27913402688550865 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 133336 22470 VVVDEKPFL True PC9_epitope_Rep4 1044.5855472874398 1044.5844499358602 94.661 2 -0.9059197490746769 0.27913402688550865 1.0 ['nc|ENSG00000158813|Q92838-9|EDA', 'nc|ENSG00000158813|Q92838-3|EDA', 'ENSG00000158813|ENST00000374552|EDA'] 117596 18409 TVSSVGALHAL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 78.876 2 -0.905921638383468 0.27913402688550865 1.0 ['ENSG00000105063|ENST00000412770|PPP6R1'] 120278 17522 VEDFQGGNKIE True PC9_epitope_Rep5 1234.5829810881398 1234.58188993586 72.404 2 -0.9059707450240515 0.2791716172529082 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'KDR|p.P1105Mfs*9|1|0.13|ENSG00000128052|chr4:55089466-55089467|-/CCTTCTTCATT|frameshift_variant', 'KDR|p.P1233Lfs*2|1|0.16|ENSG00000128052|chr4:55082602-55082602|C/-|frameshift_variant', 'nc|ENSG00000128052|P35968-2|KDR', 'nc|ENSG00000128052|P35968-3|KDR'] 109951 9351 TEGVEGRGMV True H1975_Epitope_Rep3 1033.4862442523297 1033.4851499358601 40.969 2 -0.9059833771644079 0.27918157578436925 1.0 ['ENST00000582295.1_1_17:77020258-77021030:+|nuORF'] 4284 10830 AIGRIYEEQRK True PC9_epitope_Rep1 1361.74154741821 1361.7404499358602 46.543 2 -0.9059912103333589 0.279191534040672 1.0 ['ENSG00000047621|ENST00000261250|C12orf4'] 113193 11802 TLQAMDEKLR True NCI_RA007_Epitope_Rep5 1203.62815745875 1203.6270699358602 52.055 2 -0.906068310739644 0.27921530703875114 1.0 ['ENST00000462722.5_1_9:131595865-131599118:-|nuORF', 'nc|ENSG00000286112|Q16773-2|KYAT1', 'ENSG00000171097|ENST00000302586|KYAT1'] 5498 4409 ALYGGQMA True NCI_RA007_Epitope_Rep5 809.37417462221 809.37306993586 23.589 2 -0.9061582320675027 0.2792390793799906 1.0 ['ENSG00000283039|ENST00000634670|KLF18'] 61203 17117 LILKPVTSP True PC9_epitope_Rep1 966.61136811246 966.61026993586 70.665 2 -0.9062324179626211 0.279255135448756 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 37738 13862 GWPGAGPL True PC9_epitope_Rep1 753.38097425481 753.37986993586 58.16 2 -0.9062330091997499 0.279255135448756 1.0 ['ENSG00000181585|ENST00000643606|TMIE'] 84781 11349 QDVIPDSQAA True PC9_epitope_Rep2 1042.49310345458 1042.49200993586 48.977 2 -0.9062478696201778 0.279255135448756 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 43460 15069 IGGTVLNIS True PC9_epitope_Rep1 872.4967322830399 872.49562993586 62.782 2 -0.9062647444929389 0.27925575998673957 1.0 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 12864 16852 DLHLPMLEVP True PC9_epitope_Rep3 1162.6056311090201 1162.60452993586 69.974 2 -0.9062725495649415 0.27925575998673957 1.0 ['ENST00000295759.11_1_2:220108341-220110088:-|nuORF'] 110745 11794 TGGGGGGD True NCI_RA007_Epitope_Rep5 576.21396849936 576.2134249679301 52.024 1 -0.9063179491731717 0.27925575998673957 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 59758 6387 LGECHLQL True PC9_epitope_Rep4 911.4534875720699 911.45238993586 31.656 2 -0.906325768591977 0.27925575998673957 1.0 ['ENST00000249014.4_2_22:37962162-37962273:+|nuORF'] 120283 9622 VEDKYWRFDEK True H1975_Epitope_Rep1 1513.7201432672898 1513.71904993586 41.938 2 -0.9064105500826529 0.27925575998673957 1.0 ['ENSG00000149968|ENST00000299855|MMP3'] 15864 16082 EDGAFSFV True PC9_epitope_Rep5 870.37594844402 870.37484993586 66.848 2 -0.9064417277439931 0.27925575998673957 1.0 ['ENST00000440760.5_1_2:27594325-27599583:+|nuORF', 'nc|ENSG00000115234|Q15036-2|SNX17', 'ENSG00000115234|ENST00000233575|SNX17'] 116449 17690 TTKVLTTTT True H1975_Epitope_Rep1 964.54407639828 964.54296993586 73.629 2 -0.9064504038835782 0.27925575998673957 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant'] 65121 21847 LQMRRQQP True H1975_Epitope_Rep2 1055.56583198571 1055.5647299358602 90.343 2 -0.9065209791482495 0.2792939616595768 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1'] 120698 10152 VEKEKYSEIQQ True PC9_epitope_Rep5 1379.69325981311 1379.6916149037902 44.036 3 -0.9065533655077568 0.2792939616595768 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-3|ZFYVE26', 'ENST00000394455.6_1_14:68196461-68236507:-|nuORF'] 113783 12955 TMSCGEAP True H1975_Epitope_Rep2 794.29387569618 794.2933249679301 54.948 1 -0.9066155310126126 0.2792939616595768 1.0 ['ENST00000361837.8_1_16:2512483-2514109:+|nuORF'] 29003 12639 FTEEYQKSLLE True H1975_Epitope_Rep2 1385.6714617393698 1385.6703699358602 53.715 2 -0.9066165743492316 0.2792939616595768 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 110539 17406 TFLTSYDHI True PC9_epitope_Rep5 1095.52367530687 1095.52256993586 71.952 2 -0.90663068489386 0.2792939616595768 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF'] 57429 7297 LEATNRYHMPK True NCI_RA007_Epitope_Rep1 1358.6765046335001 1358.6754099358602 32.375 2 -0.9066331234799038 0.2792939616595768 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 122283 7204 VGAVAGIVTGV True PC9_epitope_Rep4 941.55458151233 941.55348993586 35.014 2 -0.9066433698441458 0.2792939616595768 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'nc|ENSG00000170956|P40198-3|CEACAM3', 'ENST00000415495.5_1_19:42311603-42315272:+|nuORF', 'ENSG00000170956|ENST00000357396|CEACAM3'] 92573 3120 RMPGRGKG True PC9_epitope_Rep1 857.4653896684498 857.46428993586 16.839 2 -0.906654054366516 0.2792939616595768 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 5030 7858 ALINSLKVL True NCI_RA007_Epitope_Rep3 969.62226714933 969.6211699358599 38.029 2 -0.906668905386699 0.27931772667633453 1.0 ['ENST00000565062.5_1_16:90097706-90103159:+|nuORF'] 79542 13434 PDCLPYDFLSF True H1975_Epitope_Rep2 1315.5794759308299 1315.57836993586 56.807 2 -0.9066878805963796 0.27932768002651714 1.0 ['TTLL2|p.S457F|1|0.35|ENSG00000120440|chr6:167341270-167341270|C/T|missense_variant'] 30416 3899 GAEPELAVSAP True NCI_RA007_Epitope_Rep2 1039.5185899264297 1039.51748993586 19.801 2 -0.9067689023597624 0.27934596475722256 1.0 ['ENSG00000108479|ENST00000588479|GALK1', 'ENST00000589030.1_1_17:73759945-73761208:-|nuORF', 'ENST00000592494.1_1_17:73759392-73761232:-|nuORF'] 65068 13904 LQLDRISVYY True H1975_Epitope_Rep2 1268.67648755016 1268.67538993586 58.629 2 -0.9067721399116896 0.27934596475722256 1.0 ['ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 59754 9105 LGEASLTLGIA True H1975_Epitope_Rep1 1043.58627556343 1043.5851699358602 39.926 2 -0.906787965265334 0.27934596475722256 1.0 ['ENST00000477269.5_1_13:113777169-113798523:+|nuORF'] 22930 8557 EVEFEWLR True NCI_RA007_Epitope_Rep2 1106.53965972418 1106.53856993586 37.929 2 -0.9068012465714322 0.27934596475722256 1.0 ['ENSG00000140718|ENST00000471389|FTO'] 113029 11206 TLNEDWLLWQV True H1975_Epitope_Rep3 1415.70851595443 1415.7074099358601 48.202 2 -0.9068109488660325 0.27934596475722256 1.0 ['ENSG00000136040|ENST00000258526|PLXNC1', 'ENST00000549187.1_1_12:94658920-94673460:+|nuORF'] 142226 4183 YWLFYRSLREY True NCI_RA007_Epitope_Rep2 1594.7932486379 1594.7910598717199 20.909 4 -0.9068239072987782 0.27934596475722256 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 19030 8284 ELFEQLKMKK True NCI_RA007_Epitope_Rep2 1292.7162441871599 1292.7151499358602 36.861 2 -0.9069264182855221 0.2793973457804538 1.0 ['nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'ENSG00000116580|ENST00000368331|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L'] 59857 9974 LGFRRAGP True H1975_Epitope_Rep1 872.4980696957198 872.49696993586 43.302 2 -0.9069637241837109 0.2794211064158864 1.0 ['ENST00000346693.8_1_X:149936876-149937104:-|nuORF'] 102690 13649 SLYSGCRLTL True PC9_epitope_Rep4 1111.56957995347 1111.56848993586 60.393 2 -0.9069991566035303 0.27942719840919134 1.0 ['ENSG00000181143|ENST00000397910|MUC16'] 133141 19837 VVQSVKHTKR True NCI_RA007_Epitope_Rep4 1180.70403971068 1180.70294993586 85.74 2 -0.9070624692138364 0.27942719840919134 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 55289 12967 LADVCHDMSL True PC9_epitope_Rep4 1102.47871634374 1102.47760993586 57.771 2 -0.9070764070614328 0.27943612967360687 1.0 ['DIXDC1|p.R172L|1|0.17|ENSG00000150764|chr11:111974221-111974221|G/T|missense_variant'] 79624 14240 PDLVKNGLVSY True H1975_Epitope_Rep3 1203.6499384491499 1203.6488499358602 60.116 2 -0.9071331597859822 0.27943612967360687 1.0 ['PCDHAC1|p.G475V|1|0.3|ENSG00000248383|chr5:140928316-140928316|G/T|missense_variant'] 122077 14757 VFYWRPQWRVW True H1975_Epitope_Rep1 1621.8306372061297 1621.82954993586 61.986 2 -0.907152905706856 0.27943612967360687 1.0 ['ENSG00000187527|ENST00000342358|ATP13A5'] 25459 13907 FEELC[Carbamidomethyl]SDLFR True NCI_RA007_Epitope_Rep2 1314.5914378762898 1314.59034993586 58.749 2 -0.907219433073022 0.27943612967360687 1.0 ['ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 127038 15641 VLSKHLAI True PC9_epitope_Rep6 879.55418758951 879.55308993586 72.368 2 -0.9072225253198386 0.27943612967360687 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2', 'ENST00000389600.6_1_13:51590304-51594849:-|nuORF'] 94805 8107 RSPRRSRVWKR True NCI_RA007_Epitope_Rep1 1482.8756303359398 1482.8745299358602 35.533 2 -0.9072250544252857 0.27943612967360687 1.0 ['ENST00000354675.10_1_6:151671234-151671276:+|nuORF'] 36075 5193 GVADPASRKD True PC9_epitope_Rep3 1014.50942222506 1014.50832993586 25.058 2 -0.907226017742723 0.27943612967360687 1.0 ['ENST00000221930.5_1_19:41859248-41859455:-|nuORF'] 13500 20076 DNLFFLQGF True PC9_epitope_Rep5 1099.5338460677497 1099.53274993586 82.275 2 -0.907233131030806 0.27943612967360687 1.0 ['ENSG00000198837|ENST00000361217|DENND4B'] 99466 13879 SICCPHPSF True PC9_epitope_Rep5 989.40990850793 989.40880993586 58.405 2 -0.9072435832733449 0.27943612967360687 1.0 ['ENST00000391959.5_2_1:202549704-202549908:+|nuORF'] 12115 5594 DIAWWYYQYQR True H1975_Epitope_Rep1 1590.7255630009001 1590.72446993586 26.584 2 -0.9072611101319317 0.27943612967360687 1.0 ['nc|ENSG00000182132|Q9NZI2|KCNIP1'] 20659 7259 EQALLEEIERH True NCI_RA007_Epitope_Rep2 1365.6888431390098 1365.6877499358602 32.856 2 -0.9072906274217166 0.27943612967360687 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 4256 8455 AIDTSNLEKPL True H1975_Epitope_Rep3 1199.63976768827 1199.6386699358602 37.507 2 -0.9072943970216207 0.27943612967360687 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant', 'ROS1|p.F1354Lfs*35|1|0.3|ENSG00000047936|chr6:117356708-117356708|A/-|frameshift_variant'] 13054 10885 DLPEEKLP True PC9_epitope_Rep1 939.4913125494298 939.49020993586 46.753 2 -0.9073410813442137 0.27944607822833395 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 79880 10453 PELPAQKR True PC9_epitope_Rep3 937.53451477409 937.53340993586 45.146 2 -0.9073765244404288 0.2794659745136751 1.0 ['ENSG00000142698|ENST00000488417|C1orf94', 'nc|nan|Q6P1W5-2|C1orf94'] 5312 16900 ALQWARYHWRR True H1975_Epitope_Rep1 1541.81163309705 1541.8105299358601 70.416 2 -0.9073811571244825 0.2794659745136751 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D', 'ATP10D|p.N506Kfs*19|1|0.11|ENSG00000145246|chr4:47546745-47546745|T/-|frameshift_variant'] 113516 15989 TLTHHKCGPAI True NCI_RA007_Epitope_Rep3 1176.6073624445198 1176.6062699358602 70.563 2 -0.9073895351059558 0.27947206383830575 1.0 ['EED|p.A411P|1|0.24|ENSG00000074266|chr11:86278430-86278430|G/C|missense_variant'] 84450 12200 QAFVLFQFLFT True PC9_epitope_Rep5 1359.72270946659 1359.72106490379 51.913 3 -0.9074245666133542 0.27947206383830575 1.0 ['ZP4|p.P238L|1|0.15|ENSG00000116996|chr1:237887402-237887402|G/A|missense_variant'] 94454 21680 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 89.689 2 -0.9074903566663031 0.2795079930423259 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 107702 7466 SVSASVFTL True PC9_epitope_Rep2 909.48074786573 909.47964993586 34.091 2 -0.9075176111756653 0.2795079930423259 1.0 ['ENSG00000148734|ENST00000277942|NPFFR1', 'NPFFR1|p.V135L|1|0.75|ENSG00000148734|chr10:70260659-70260659|C/A|missense_variant'] 126612 19284 VLMIRMLR True NCI_RA007_Epitope_Rep5 1030.61436240126 1030.6132699358602 81.046 2 -0.9075254253169273 0.2795079930423259 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 84963 8469 QEEMIFQIPWK True NCI_RA007_Epitope_Rep2 1447.7169724631497 1447.7158699358602 37.586 2 -0.9075529127382232 0.2795079930423259 1.0 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000472045.1_1_5:131822508-131823888:-|nuORF'] 95137 12498 RVFRALLVQWD True NCI_RA007_Epitope_Rep1 1401.7881036878098 1401.7870099358602 52.593 2 -0.9075575318051015 0.2795079930423259 1.0 ['ENST00000327097.4_1_2:119739014-119739962:+|nuORF'] 10981 4405 DALAAGRLPD True NCI_RA007_Epitope_Rep3 997.51925863277 997.51816993586 24.106 2 -0.9075898833848732 0.2795179392316294 1.0 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 33573 13933 GLEVFPGD True H1975_Epitope_Rep3 832.3966838885998 832.39613496793 58.907 1 -0.9076312888979752 0.27953397200519037 1.0 ['ENSG00000187510|ENST00000344636|PLEKHG7'] 1521 4859 AEENEQITIA True PC9_epitope_Rep4 1116.52988288612 1116.52878993586 25.28 2 -0.9076493263216274 0.27953397200519037 1.0 ['PRKAA1-TBC1D5|1|fusion', 'nc|ENSG00000131374|Q92609|TBC1D5', 'ENSG00000131374|ENST00000696125|TBC1D5'] 3606 13523 AGNVYIVKISA True PC9_epitope_Rep5 1133.6444591458899 1133.6433699358602 57.038 2 -0.9076738076271512 0.27953397200519037 1.0 ['ENSG00000166450|ENST00000389286|PRTG', 'PRTG|p.R972Tfs*3|1|0.55|ENSG00000166450|chr15:55627021-55627022|-/T|frameshift_variant'] 86623 9342 QLESFYIQ True PC9_epitope_Rep6 1026.5022115863 1026.50110993586 46.118 2 -0.907735397153426 0.279567666059301 1.0 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000566672.5_1_15:72638574-72647950:-|nuORF', 'nc|ENSG00000213614|P06865-2|HEXA', 'ENST00000568777.5_1_15:72638642-72646100:-|nuORF'] 19702 13400 ELRNQLLNV True PC9_epitope_Rep4 1097.61930702721 1097.61820993586 59.444 2 -0.9077601452986643 0.279567666059301 1.0 ['nc|ENSG00000173588|Q9Y592-2|CEP83', 'ENSG00000173588|ENST00000397809|CEP83'] 13443 9847 DNASPKFTSKE True H1975_Epitope_Rep3 1222.5829810881403 1222.58188993586 42.906 2 -0.9079006407988328 0.2795936395759717 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 68319 20584 LTELLLEPG True PC9_epitope_Rep2 983.5539128059899 983.55280993586 84.609 2 -0.9079184022451307 0.2795936395759717 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114437689-114438127:-|nuORF'] 126061 7571 VLEENAQKKR True H1975_Epitope_Rep1 1213.6778845324898 1213.6767899358601 34.112 2 -0.9079469400878906 0.2795936395759717 1.0 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000562258.5_1_15:42452954-42456706:-|nuORF'] 92574 3572 RMPGRGKG True PC9_epitope_Rep2 857.4653896684498 857.46428993586 19.015 2 -0.9079551596283345 0.2795936395759717 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 60735 21016 LHRHWIWPRNI True PC9_epitope_Rep1 1526.8371195688997 1526.8354649037901 85.667 3 -0.9080095453734972 0.27963118883628485 1.0 ['ENST00000537507.1_1_12:12841836-12848440:-|nuORF', 'ENST00000545876.5_1_12:12837279-12848440:-|nuORF', 'ENST00000332427.6_1_12:12815387-12848440:-|nuORF'] 128340 17476 VPQESLHAL True PC9_epitope_Rep3 992.5290950404798 992.52798993586 72.4 2 -0.9080354082418545 0.2796372720873418 1.0 ['ENST00000569462.5_1_15:75074984-75090589:+|nuORF'] 112991 13002 TLLSYQASGNL True PC9_epitope_Rep2 1165.59790287629 1165.5962549037902 55.299 3 -0.9080393384073572 0.2796372720873418 1.0 ['ENST00000443660.5_1_22:19420361-19420817:+|nuORF'] 30408 5618 GAELRQPP True H1975_Epitope_Rep3 866.4610154806599 866.45990993586 26.646 2 -0.9080708959942517 0.2796610169491525 1.0 ['ENSG00000261594|ENST00000562197|TPBGL'] 49449 6087 KEYESYSDF True NCI_RA007_Epitope_Rep1 1166.4767846840998 1166.4756899358601 27.714 2 -0.9081355766852798 0.2796693211145921 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 57278 3686 LDYRPKVLM True NCI_RA007_Epitope_Rep2 1133.6267009067699 1133.62504490379 18.988 3 -0.9081632939684096 0.2796693211145921 1.0 ['ENST00000313771.9_1_10:90751381-90762834:+|nuORF', 'ENST00000477270.5_1_10:90750964-90762834:+|nuORF'] 16430 7819 EEKRCAKLP True H1975_Epitope_Rep2 1072.5699143066397 1072.5688099358601 35.023 2 -0.9082047156754339 0.2796693211145921 1.0 ['GSDMB|p.E256Yfs*35|1|0.07|ENSG00000073605|chr17:39906234-39906235|-/ATATAAACCCAAATGTTTTTGATAT|frameshift_variant'] 57444 8316 LEAWELEFYLW True NCI_RA007_Epitope_Rep1 1497.71801800897 1497.7169299358602 36.347 2 -0.9082135310338537 0.2796693211145921 1.0 ['ENST00000415328.1_1_3:57516074-57516185:-|nuORF'] 133510 16639 VWKYFVQLC True PC9_epitope_Rep2 1184.6052371862 1184.60412993586 69.247 2 -0.9082473852374202 0.2796693211145921 1.0 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'ENSG00000151414|ENST00000367385|NEK7'] 69463 12951 LVACLCVLLL True PC9_epitope_Rep3 1058.62319574946 1058.62208993586 54.84 2 -0.9082647505964385 0.27967926246929253 1.0 ['SLC7A5|p.F394Sfs*22|1|0.28|ENSG00000103257|chr16:87836607-87836607|A/-|frameshift_variant', 'ENSG00000103257|ENST00000261622|SLC7A5'] 26080 20832 FGLPPKRLWR True PC9_epitope_Rep2 1268.75059598028 1268.74948993586 85.575 2 -0.908363792853577 0.2797267457907811 1.0 ['ENST00000261783.3_1_14:68086627-68108954:+|nuORF'] 22451 23078 ETETVFVP True PC9_epitope_Rep3 920.4491133842798 920.44800993586 94.038 2 -0.9083646854470125 0.2797267457907811 1.0 ['ENSG00000176986|ENST00000345254|SEC24C', 'SEC24C|p.P700Lfs*37|1|0.12|ENSG00000176986|chr10:73767923-73767923|C/-|frameshift_variant'] 46945 12178 ITPDSSLPQP True H1975_Epitope_Rep1 1053.5342399905699 1053.5331499358601 51.861 2 -0.9083896238139748 0.27973282548094175 1.0 ['ENSG00000111181|ENST00000684302|SLC6A12'] 110916 19574 TGVQWHDFG True PC9_epitope_Rep5 1045.46174375665 1045.4606499358601 80.343 2 -0.9084175641924006 0.27973282548094175 1.0 ['nc|ENSG00000118513|P10242-6|MYB'] 25171 2339 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 13.522 2 -0.908577953319679 0.27978030470302495 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 11231 6182 DEEDFFDFK True NCI_RA007_Epitope_Rep2 1190.4767846840998 1190.4756899358601 28.653 2 -0.9085851449012315 0.27978030470302495 1.0 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 11424 4672 DEVSDFSANTK True NCI_RA007_Epitope_Rep2 1211.53061116211 1211.52950993586 22.8 2 -0.9086218987188744 0.27980404333126335 1.0 ['PLCL1|p.Y706D|1|0.34|ENSG00000115896|chr2:198085633-198085633|T/G|missense_variant'] 101967 8638 SLQFRLLENK True H1975_Epitope_Rep3 1246.70337100434 1246.7022699358602 38.221 2 -0.9086431154289739 0.27982778130433583 1.0 ['ENSG00000151790|ENST00000536354|TDO2'] 25153 26948 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 111.48 2 -0.9086839230256953 0.2798653180068169 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 136596 15280 WWNLRRTCFRI True H1975_Epitope_Rep1 1549.8088562157297 1549.80774993586 64.041 2 -0.9087280909674349 0.27987525528509133 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 45753 6210 ISAGGYIK True PC9_epitope_Rep1 807.44905381463 807.44794993586 28.701 2 -0.9088126526101266 0.2799227266455085 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 94798 27427 RSPRGILG True PC9_epitope_Rep1 854.5086343794198 854.50752993586 112.17 2 -0.90888268941819 0.2799227266455085 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 36766 18535 GVKMWHLVKN True PC9_epitope_Rep2 1210.6644833978198 1210.66282490379 76.645 3 -0.9088996869139802 0.2799326627202605 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'PLXNA4|p.G1706Afs*40|1|0.25|ENSG00000221866|chr7:132145227-132145227|C/-|frameshift_variant', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4', 'PLXNA4|p.A1683Pfs*63|1|0.33|ENSG00000221866|chr7:132146518-132146518|C/-|frameshift_variant'] 47843 15557 IYHKMSISEL True PC9_epitope_Rep5 1219.6270948295899 1219.6254449037901 64.85 3 -0.9089260542796919 0.2799563969533061 1.0 ['ENST00000490579.1_1_3:183995094-184008674:+|nuORF', 'ENST00000488401.5_1_3:183993962-184009147:+|nuORF', 'nc|ENSG00000145194|P0DPD6-3|ECE2', 'ENSG00000145194|ENST00000404464|ECE2', 'nc|ENSG00000145194|P0DPD6|ECE2', 'nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2'] 72919 6402 MPWFFLWHLKK True NCI_RA007_Epitope_Rep4 1531.8162330119496 1531.81459490379 31.227 3 -0.9089632311497018 0.2799586064160055 1.0 ['ENST00000342922.8_1_11:47290950-47291097:+|nuORF'] 45056 16523 IPHQRRSI True PC9_epitope_Rep5 1005.58319630201 1005.58208993586 68.556 2 -0.9089663997873848 0.2799586064160055 1.0 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 5700 6250 APAKTKES True PC9_epitope_Rep3 830.4497820906199 830.44868993586 29.078 2 -0.9089786012347302 0.2799586064160055 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2'] 3188 5872 AGEEPPAQPP True H1975_Epitope_Rep2 991.4610750503098 991.45996993586 27.572 2 -0.9089863871523868 0.27996854131022686 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 131312 14358 VTGGYDYD True PC9_epitope_Rep6 888.350127619 888.34902993586 67.124 2 -0.909072126904859 0.27998289254031977 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 73612 7057 MWFSWGVL True PC9_epitope_Rep6 1024.4840594243597 1024.4829699358602 36.16 2 -0.9090746464197513 0.27998289254031977 1.0 ['nc|ENSG00000176884|Q05586-2|GRIN1', 'nc|ENSG00000176884|Q05586-3|GRIN1', 'nc|ENSG00000176884|Q05586-7|GRIN1', 'nc|ENSG00000176884|Q05586-4|GRIN1', 'ENSG00000176884|ENST00000371561|GRIN1', 'nc|ENSG00000176884|Q05586-6|GRIN1', 'nc|ENSG00000176884|Q05586-5|GRIN1'] 14879 9660 DWLVDRRHCSL True H1975_Epitope_Rep1 1398.6826526431 1398.6815499358602 42.083 2 -0.9090978784737357 0.27998289254031977 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'ENST00000579853.5_1_17:46048512-46051060:+|nuORF', 'ENST00000581708.5_1_17:46048512-46051791:+|nuORF', 'ENST00000584063.5_1_17:46048512-46051888:+|nuORF', 'ENST00000584525.5_1_17:46048512-46051498:+|nuORF', 'ENST00000583182.5_1_17:46048501-46051888:+|nuORF'] 107706 10778 SVSCERTVL True PC9_epitope_Rep1 992.49608066004 992.49498993586 46.345 2 -0.9091105992274146 0.27998289254031977 1.0 ['CRIM1|p.P797T|1|0.13|ENSG00000150938|chr2:36522274-36522274|C/A|missense_variant'] 123507 7229 VGPHELVG True NCI_RA007_Epitope_Rep5 806.4286527232199 806.42754993586 34.483 2 -0.9091329108619712 0.27998289254031977 1.0 ['ENST00000352251.7_2_13:39611887-39612184:-|nuORF'] 16800 10448 EEVPFQALK True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 45.142 2 -0.9091544537882283 0.27998289254031977 1.0 ['ENST00000461491.5_1_3:25819310-25825562:-|nuORF', 'ENST00000474611.1_1_3:25819310-25824959:-|nuORF'] 40252 16655 HQKIIEEA True PC9_epitope_Rep5 966.5134449763399 966.51234993586 69.069 2 -0.9091983445445879 0.27998289254031977 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant', 'ACACA|p.M503Wfs*13|1|0.25|ENSG00000278540|chr17:37258368-37258368|G/-|frameshift_variant', 'ENST00000495767.5_1_3:182740340-182790239:-|nuORF', 'ENSG00000078070|ENST00000265594|MCCC1'] 121602 23272 VFFLIVVICK True NCI_RA007_Epitope_Rep3 1179.70897397875 1179.70732490379 101.09 3 -0.909216362315913 0.27999282600298 1.0 ['ENSG00000134294|ENST00000256689|SLC38A2', 'nc|ENSG00000134294|Q96QD8-2|SLC38A2'] 13078 7658 DLQARLRETW True NCI_RA007_Epitope_Rep1 1286.67313350522 1286.67148490379 33.781 3 -0.9092924786013153 0.28001269210606183 1.0 ['ENST00000588398.1_1_16:4748426-4748941:-|nuORF', 'ENST00000590803.5_1_16:4747031-4751860:-|nuORF', 'nc|ENSG00000168096|Q6ZW76-2|ANKS3', 'ENSG00000168096|ENST00000304283|ANKS3'] 59274 6213 LFFYRKFRFWN True H1975_Epitope_Rep1 1622.8510382975396 1622.84938490379 28.967 3 -0.9092954754440211 0.28001269210606183 1.0 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 45196 7999 IPRDQSPSL True PC9_epitope_Rep4 1011.53490869691 1011.53380993586 38.218 2 -0.9093188287287806 0.28002869400874614 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 29241 6732 FTVTANAV True PC9_epitope_Rep2 821.4283183700499 821.4272299358599 31.304 2 -0.9093426844707625 0.28002869400874614 1.0 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000528826.1_1_11:76157982-76169407:+|nuORF', 'ENST00000427574.6_1_11:76157982-76207767:+|nuORF'] 57545 12499 LEDQWPSPP True H1975_Epitope_Rep2 1067.49237517859 1067.4912699358601 53.169 2 -0.9093433817515135 0.28002869400874614 1.0 ['ENST00000588376.5_1_19:418930-422520:-|nuORF', 'ENSG00000129946|ENST00000264554|SHC2'] 71944 21320 MERPGTAGS True NCI_RA007_Epitope_Rep5 904.4072656556399 904.40616993586 89.064 2 -0.9093984163361822 0.2800584892126028 1.0 ['ENST00000304623.12_2_5:11236860-11236926:-|nuORF'] 135789 6867 WMWWRRNRRGK True H1975_Epitope_Rep1 1630.8527867163796 1630.85113490379 31.458 3 -0.9094343707269221 0.2800584892126028 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 25158 21767 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 88.561 2 -0.9094353644355413 0.2800584892126028 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 53125 23448 KPTLLWLQQF True PC9_epitope_Rep1 1272.72304381976 1272.72194993586 94.977 2 -0.9095287633920951 0.28012359814051013 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 124442 10048 VGVGQAEFDA True H1975_Epitope_Rep1 991.4610750503098 991.45996993586 43.589 2 -0.9096511943711048 0.2801749110271195 1.0 ['ENSG00000124772|ENST00000244751|CPNE5', 'nc|ENSG00000124772|Q9HCH3-2|CPNE5'] 44213 17765 IKFEKDLRRIW True NCI_RA007_Epitope_Rep1 1502.8721676649398 1502.87106993586 73.241 2 -0.9096794690124653 0.28018097550209664 1.0 ['ENSG00000175756|ENST00000338338|AURKAIP1'] 46260 9586 ISPANEKTL True PC9_epitope_Rep1 971.5287606873101 971.52766993586 41.729 2 -0.9097020959115143 0.28018097550209664 1.0 ['ENSG00000154781|ENST00000383794|CCDC174', 'CCDC174|p.T436Nfs*23|1|0.73|ENSG00000154781|chr3:14671095-14671096|-/A|frameshift_variant', 'CCDC174|p.D443Rfs*16|1|0.12|ENSG00000154781|chr3:14671111-14671112|-/C|frameshift_variant', 'ENST00000465759.1_1_3:14693292-14708492:+|nuORF'] 45457 9562 IQKREFLRQRF True H1975_Epitope_Rep1 1519.8735646472699 1519.87192490379 41.706 3 -0.9098783591130033 0.2802322854738817 1.0 ['ENSG00000150783|ENST00000280358|TEX12'] 70491 9748 LVVRSGRDR True NCI_RA007_Epitope_Rep1 1056.6152247062798 1056.61412993586 41.919 2 -0.9099331315505996 0.2802383481151464 1.0 ['ENST00000522720.1_1_8:101733810-101734948:-|nuORF'] 110180 8074 TEPWDRTNP True PC9_epitope_Rep5 1114.50433684462 1114.5032299358602 35.995 2 -0.9099468215591835 0.2802383481151464 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF'] 59298 12577 LFGVNLDSL True PC9_epitope_Rep5 976.52294703088 976.52184993586 53.377 2 -0.9099913021118264 0.2802543378113707 1.0 ['nc|ENSG00000021461|Q9HB55-4|CYP3A43', 'nc|ENSG00000021461|Q9HB55-3|CYP3A43', 'ENSG00000021461|ENST00000354829|CYP3A43', 'nc|ENSG00000021461|Q9HB55-2|CYP3A43'] 63548 22309 LMDDYLGLV True PC9_epitope_Rep4 1037.5103337418498 1037.5097749679298 94.051 1 -0.910004139638757 0.2802543378113707 1.0 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF', 'ENST00000525455.5_1_11:62530233-62533976:+|nuORF'] 9021 6177 AVGYVQETL True NCI_RA007_Epitope_Rep4 978.5022115862998 978.50110993586 30.369 2 -0.9100075802826312 0.2802543378113707 1.0 ['ENST00000528528.1_1_8:145748473-145749039:+|nuORF', 'ENST00000292524.5_1_8:145748479-145748992:+|nuORF'] 58732 15232 LERWIQDL True PC9_epitope_Rep2 1071.5712942056298 1071.57018993586 63.857 2 -0.9100382518145911 0.2802802526687447 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 44485 23412 ILLFRRPLPK True PC9_epitope_Rep1 1251.8179472641098 1251.81631490379 94.838 3 -0.9100404633435097 0.2802802526687447 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 141521 22139 YTLKSMRR True PC9_epitope_Rep4 1053.57533404025 1053.57422993586 93.373 2 -0.9100544346343419 0.2802802526687447 1.0 ['ENST00000474289.6_1_6:127664143-127664416:-|nuORF'] 11329 5262 DELNKRLHTKG True NCI_RA007_Epitope_Rep1 1309.7102472899298 1309.70860490379 24.551 3 -0.9101327847897092 0.2802802526687447 1.0 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2', 'ENST00000523861.1_1_8:120584407-120592491:-|nuORF'] 42929 7794 IERYKKDL True PC9_epitope_Rep4 1063.6025943339098 1063.6014899358602 37.379 2 -0.910146838171014 0.2802901788792806 1.0 ['nc|ENSG00000160404|Q8N2E6|TOR2A', 'nc|ENSG00000160404|Q5JU69-2|TOR2A', 'ENSG00000160404|ENST00000373284|TOR2A'] 129717 18060 VRPRPGTG True NCI_RA007_Epitope_Rep5 838.47733425114 838.47622993586 76.265 2 -0.910257803900605 0.28032768797925744 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 112446 14133 TLDDVIKE True NCI_RA007_Epitope_Rep4 931.48622716899 931.4856749679301 61.641 1 -0.9102910176516347 0.28035140465321545 1.0 ['CHMP2B|p.V10L|1|0.14|ENSG00000083937|chr3:87227550-87227550|G/T|missense_variant'] 25149 3837 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 20.993 2 -0.9103115574603711 0.280361329471797 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 65587 16070 LRTLLLKHS True PC9_epitope_Rep1 1079.68151336095 1079.68040993586 66.628 2 -0.9103371640606821 0.28037125401663193 1.0 ['nc|ENSG00000114923|P48751-2|SLC4A3', 'ENSG00000114923|ENST00000358055|SLC4A3', 'nc|ENSG00000114923|P48751-3|SLC4A3', 'SLC4A3|p.V465Cfs*39|1|0.17|ENSG00000114923|chr2:219633388-219633388|G/-|frameshift_variant'] 68991 9877 LTPPRTRDAK True H1975_Epitope_Rep1 1153.6567551650899 1153.65564993586 42.925 2 -0.910473338660328 0.2804247397090257 1.0 ['ENST00000266529.7_1_12:42719776-42719875:-|nuORF'] 64055 8000 LPAPSPVTSP True H1975_Epitope_Rep2 964.52294703088 964.52184993586 35.721 2 -0.910477544783954 0.2804247397090257 1.0 ['ENST00000335565.4_2_X:144902973-144903012:+|nuORF'] 112663 10396 TLFRDRKHHFK True H1975_Epitope_Rep3 1483.81604977115 1483.81441490379 45.045 3 -0.9104798838257591 0.2804247397090257 1.0 ['ENST00000507841.5_1_5:1599703-1599838:-|nuORF'] 102944 9578 SPEDPWVKA True H1975_Epitope_Rep2 1027.4974605590298 1027.49636993586 41.816 2 -0.9104910351492779 0.2804247397090257 1.0 ['nc|ENSG00000108788|Q9UH92|MLX'] 129915 18812 VRSVILQGSG True NCI_RA007_Epitope_Rep3 1014.5821932424999 1014.58108993586 82.264 2 -0.9104959244477985 0.28044071816652416 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 33052 11590 GILHNVKL True PC9_epitope_Rep5 892.54943656224 892.54832993586 49.577 2 -0.9105034933016589 0.28044071816652416 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 74603 14933 NGGGGGGGAG True NCI_RA007_Epitope_Rep5 659.2623156741099 659.26176496793 64.105 1 -0.910509572949225 0.28044071816652416 1.0 ['nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant'] 55951 20536 LARLTKEERLK True H1975_Epitope_Rep2 1355.8248831193498 1355.82322490379 85.078 3 -0.9105482302514599 0.2804566953020504 1.0 ['nc|ENSG00000069535|P27338-2|MAOB', 'ENSG00000069535|ENST00000378069|MAOB'] 129958 21867 VRVGLLLGGGG True H1975_Epitope_Rep3 996.6080140675198 996.60690993586 91.42 2 -0.9105562125906975 0.2804566953020504 1.0 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1'] 25160 23503 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 95.191 2 -0.9105618638039006 0.2804566953020504 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 93250 17604 RPRRPRRWWRQ True H1975_Epitope_Rep1 1648.9399619279998 1648.93886993586 73.246 2 -0.9106088238586031 0.28046661702655745 1.0 ['ENST00000372022.5_1_9:136199397-136199478:-|nuORF'] 130709 13811 VSVHFTQRK True PC9_epitope_Rep3 1100.6090766966797 1100.6079699358602 58.202 2 -0.9106798312792072 0.28047267111576857 1.0 ['nc|ENSG00000069869|P46934-3|NEDD4', 'nc|ENSG00000069869|P46934-2|NEDD4', 'nc|ENSG00000069869|P46934|NEDD4'] 94460 22465 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 92.831 2 -0.9106807406533437 0.28047267111576857 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 128608 16965 VPTTSLVL True PC9_epitope_Rep6 828.49566965388 828.49456993586 77.801 2 -0.91070482452219 0.2804825922095829 1.0 ['ENST00000369528.9_2_1:115314278-115314449:-|nuORF'] 136252 12014 WRWQLEEERKR True NCI_RA007_Epitope_Rep1 1614.8379074145398 1614.8368099358602 50.719 2 -0.9107394513130742 0.28049251302981 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 81399 10179 PLEAEFQRLP True PC9_epitope_Rep1 1198.6346227381798 1198.63352993586 44.03 2 -0.9107925083388261 0.2804985660710346 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 87665 17166 QQSLEVILK True H1975_Epitope_Rep1 1056.6179100448799 1056.61737496793 71.48 1 -0.9108021595593007 0.2804985660710346 1.0 ['nc|ENSG00000138735|O76074-2|PDE5A', 'ENSG00000138735|ENST00000354960|PDE5A', 'ENST00000508914.1_1_4:120473609-120484125:-|nuORF'] 100614 12474 SLDAYAHAL True H1975_Epitope_Rep3 959.47124581119 959.47014993586 53.175 2 -0.9108280723125871 0.28050848626066816 1.0 ['nc|ENSG00000169169|Q8TCG5-2|CPT1C', 'ENSG00000169169|ENST00000598293|CPT1C', 'ENST00000295404.9_1_19:50200719-50213852:+|nuORF', 'ENST00000599023.5_1_19:50195509-50213852:+|nuORF', 'nc|ENSG00000169169|Q8TCG5-3|CPT1C'] 128145 5170 VPLNWLRSRPY True PC9_epitope_Rep5 1399.77245362367 1399.7707949037901 24.905 3 -0.910852680254451 0.28051067115204326 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 73138 16374 MRRKRKQQKRL True PC9_epitope_Rep6 1526.9416017207798 1526.93995490379 75.369 3 -0.9108575481515209 0.28051067115204326 1.0 ['nc|ENSG00000184343|Q9UPE1-2|SRPK3', 'nc|ENSG00000184343|Q9UPE1-3|SRPK3', 'nc|ENSG00000184343|Q9UPE1-4|SRPK3', 'ENSG00000184343|ENST00000370101|SRPK3'] 121023 5737 VEQFTQQD True H1975_Epitope_Rep3 993.4403396057298 993.43924993586 27.097 2 -0.9108635871472535 0.28051067115204326 1.0 ['ENSG00000173546|ENST00000308508|CSPG4'] 123204 4786 VGLEEIGGRR True NCI_RA007_Epitope_Rep4 1084.5989059357998 1084.5978099358601 24.845 2 -0.9109477030179438 0.2805205906277143 1.0 ['ENST00000538697.1_1_12:6677210-6677375:-|nuORF'] 110744 13347 TGGGGGGD True NCI_RA007_Epitope_Rep4 576.21396849936 576.2134249679301 58.49 1 -0.9109922553141132 0.2805580831058538 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 81637 8959 PLLKTLKSA True NCI_RA007_Epitope_Rep2 969.6222671493299 969.6211699358599 39.468 2 -0.9110080694933721 0.2805641336715562 1.0 ['ENST00000397988.7_1_18:61645690-61649045:+|nuORF'] 37207 14801 GVRCAGGH True NCI_RA007_Epitope_Rep3 755.3496912098699 755.3491449679301 65.641 1 -0.9110094667551478 0.2805641336715562 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B'] 101397 25118 SLKLLMYHRI True PC9_epitope_Rep3 1272.7376483380801 1272.73600490379 101.97 3 -0.9111084561991212 0.2806154100665867 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.E939Sfs*27|1|0.29|ENSG00000077063|chr7:117767144-117767144|C/-|frameshift_variant'] 32379 17379 GFLPWEKKK True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 79.464 2 -0.9112103329913299 0.2806296868107631 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB'] 137488 7157 YEEFWIKYAKY True H1975_Epitope_Rep1 1538.74456710998 1538.7429149037903 32.553 3 -0.9112193115618212 0.2806296868107631 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 34161 17461 GNFKFWDTEL True PC9_epitope_Rep1 1255.5873381925899 1255.58624993586 71.961 2 -0.9112388389227185 0.2806296868107631 1.0 ['ENST00000262394.6_2_17:25639733-25639799:+|nuORF'] 92576 3764 RMPGRGKG True PC9_epitope_Rep5 857.4653896684498 857.46428993586 19.563 2 -0.9112880739652762 0.2806296868107631 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 36182 6872 GVAVMVLMVP True NCI_RA007_Epitope_Rep1 1014.5605954928999 1014.55948993586 30.734 2 -0.9113061782377117 0.2806296868107631 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ENST00000574224.1_1_16:16108407-16150188:+|nuORF'] 44484 23309 ILLFRRPLPK True PC9_epitope_Rep1 1251.8179472641098 1251.81631490379 94.446 3 -0.9113293797665606 0.2806296868107631 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 11421 13298 DEVLDGLNPIQ True H1975_Epitope_Rep3 1211.60338217955 1211.6022899358602 56.408 2 -0.9113722107737418 0.2806296868107631 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 92394 9924 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 43.504 2 -0.9114230391487914 0.2806533875525536 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 66443 11754 LSGQKKPLAA True PC9_epitope_Rep1 1011.6076797143497 1011.60658993586 50.085 2 -0.9114906533165577 0.28070465635596725 1.0 ['ENST00000311852.10_1_14:23315916-23316006:+|nuORF'] 80040 7858 PFGRGGGG True PC9_epitope_Rep3 703.3401720719899 703.33962496793 35.212 1 -0.911586191688582 0.2807365751461021 1.0 ['ENST00000580624.1_1_17:64172908-64188196:-|nuORF'] 45460 22483 IQKYLWWKRYL True PC9_epitope_Rep1 1595.8976541367897 1595.89654993586 91.281 2 -0.9116423973277449 0.2807365751461021 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 128906 4628 VQGGREPAL True NCI_RA007_Epitope_Rep3 925.4981292653698 925.49702993586 25.123 2 -0.9116433757151381 0.2807365751461021 1.0 ['ENST00000316461.8_1_11:62496181-62496406:+|nuORF'] 112974 20847 TLLRLLLR True H1975_Epitope_Rep3 996.6807850849599 996.67968993586 87.078 2 -0.9116467510205664 0.2807365751461021 1.0 ['ENSG00000183921|ENST00000602312|SDR42E2', 'ENST00000395526.8_1_10:51956672-51962602:-|nuORF', 'ENST00000374007.5_2_10:52499748-52504894:+|nuORF', 'nc|ENSG00000204147|P0C7U1|ASAH2B'] 595 8181 AARLPPQDFLD True PC9_epitope_Rep5 1241.6404363946099 1241.63878490379 36.408 3 -0.9116483057896754 0.2807365751461021 1.0 ['ENSG00000136026|ENST00000378026|CKAP4'] 25147 3639 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 19.98 2 -0.9116570641612259 0.2807365751461021 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 4285 11018 AIGRIYEEQRK True PC9_epitope_Rep1 1361.74154741821 1361.7404499358602 47.268 2 -0.9117434303779061 0.28077405482888373 1.0 ['ENSG00000047621|ENST00000261250|C12orf4'] 92262 18242 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 75.715 2 -0.911785108212435 0.2807800978567983 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 65735 4065 LSCRWWTCWFR True NCI_RA007_Epitope_Rep1 1542.7012799126999 1542.6996449037902 19.867 3 -0.9118045809613536 0.2807800978567983 1.0 ['ENST00000569069.1_1_15:75658861-75660070:-|nuORF'] 20915 13542 EQMERIRRHQQ True NCI_RA007_Epitope_Rep1 1509.75827719485 1509.75716993586 56.683 2 -0.9119779593406121 0.2808103079997244 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'AEBP2-PLEKHA5|3|fusion', 'AEBP2-PLEKHA5|2|fusion', 'AEBP2-PLEKHA5|4|fusion', 'AEBP2-PLEKHA5|10|fusion', 'AEBP2-PLEKHA5|1|fusion', 'AEBP2-PLEKHA5|9|fusion'] 45791 7234 ISCVELGPRP True H1975_Epitope_Rep3 1069.5590152697698 1069.5579099358602 32.797 2 -0.9119930238087147 0.2808103079997244 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF'] 75690 9107 NLIGHAHPN True H1975_Epitope_Rep1 971.4937125912701 971.49260993586 39.934 2 -0.9120295859105073 0.2808103079997244 1.0 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 101442 14012 SLKSSKKKNRK True NCI_RA007_Epitope_Rep4 1302.80956740838 1302.80846993586 61.175 2 -0.9120309258219396 0.2808103079997244 1.0 ['LTN1|p.G537R|1|0.68|ENSG00000198862|chr21:28966882-28966882|C/G|missense_variant'] 133379 25450 VVVGVGLIVG True PC9_epitope_Rep5 910.5851533646199 910.58404993586 103.13 2 -0.9120390667582237 0.2808103079997244 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 110040 9682 TELAAYLENR True PC9_epitope_Rep3 1178.59315184902 1178.5920499358601 42.19 2 -0.9120565834131159 0.2808103079997244 1.0 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46400622-46401494:+|nuORF', 'ENST00000534802.1_1_11:46400234-46401494:+|nuORF'] 67907 20856 LTCNVWGDP True PC9_epitope_Rep1 1003.4433168111899 1003.4427749679301 85.048 1 -0.912081577096325 0.2808103079997244 1.0 ['ENSG00000101605|ENST00000356443|MYOM1', 'nc|ENSG00000101605|P52179-2|MYOM1', 'FHOD3-MYOM1|1|fusion'] 7554 5857 ASEGMRFVDF True PC9_epitope_Rep5 1157.51754438061 1157.51590490379 27.521 3 -0.9121388792303473 0.2808103079997244 1.0 ['ENSG00000141337|ENST00000621439|ARSG'] 37131 12366 GVQAGRGA True NCI_RA007_Epitope_Rep3 714.3772858566998 714.37673496793 55.836 1 -0.9121524268496572 0.2808103079997244 1.0 ['ENST00000464994.5_1_2:102608489-102626165:+|nuORF', 'ENST00000332549.7_1_2:102608419-102626165:+|nuORF'] 3738 8719 AGSLWLLK True H1975_Epitope_Rep3 886.5276384885 886.52654993586 38.539 2 -0.9121721262102204 0.2808103079997244 1.0 ['ENSG00000174292|ENST00000688331|TNK1', 'nc|ENSG00000174292|Q13470|TNK1'] 36551 7239 GVGVVGIIE True PC9_epitope_Rep1 841.49091862661 841.48982993586 32.658 2 -0.9121930698712164 0.2808202188352672 1.0 ['ENSG00000159256|ENST00000400485|MORC3'] 133376 25584 VVVGVGLIVG True PC9_epitope_Rep3 910.5851533646199 910.58404993586 103.9 2 -0.9122467383257701 0.28084003968691434 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 46936 8920 ITNYKDLR True H1975_Epitope_Rep1 1021.5556441414899 1021.55454993586 39.215 2 -0.9122856975429356 0.28084003968691434 1.0 ['ENSG00000131459|ENST00000253778|GFPT2'] 102592 6149 SLWEGAPP True H1975_Epitope_Rep3 855.4126683059098 855.41156993586 28.662 2 -0.9123008835636798 0.28084220969808876 1.0 ['ENSG00000008516|ENST00000336577|MMP25', 'ENST00000553852.1_1_14:35515945-35516146:+|nuORF'] 61835 5609 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 26.96 2 -0.9123365135183548 0.28084220969808876 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 69290 18659 LTTREWPLNRA True PC9_epitope_Rep1 1355.7309827345098 1355.72988993586 76.56 2 -0.912342341325227 0.28084220969808876 1.0 ['XKR3|p.I189T|1|0.1|ENSG00000172967|chr22:16799794-16799794|A/G|missense_variant'] 102803 1166 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 6.5197 2 -0.9124261887113925 0.28085211927465137 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 82892 7664 PSAASCCTMTF True PC9_epitope_Rep3 1117.42423824273 1117.42314993586 34.479 2 -0.9124541929324791 0.28085815856918456 1.0 ['ENST00000567934.5_1_16:65105947-65106067:-|nuORF'] 132598 3893 VVEYECRPGYR True NCI_RA007_Epitope_Rep5 1369.6448701520499 1369.64323490379 21.259 3 -0.9124652519254647 0.28085815856918456 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 124118 19111 VGSPVRQRRS True NCI_RA007_Epitope_Rep1 1140.64758746372 1140.64707496793 78.477 1 -0.912496410165841 0.2808680675163624 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 102759 10452 SNEEWWRGKIG True H1975_Epitope_Rep1 1360.6523980606396 1360.6513099358601 45.158 2 -0.912512404253318 0.2808741061217741 1.0 ['ENSG00000185482|ENST00000332782|STAC3', 'nc|ENSG00000185482|Q96MF2-3|STAC3', 'nc|ENSG00000185482|Q96MF2-2|STAC3'] 101072 17022 SLGFLWNEI True PC9_epitope_Rep1 1077.54949613189 1077.54838993586 70.299 2 -0.9125214082165559 0.2808741061217741 1.0 ['ENST00000433206.6_1_17:37076214-37076325:+|nuORF'] 93904 20733 RRFPCFKKALI True NCI_RA007_Epitope_Rep2 1377.8067309574099 1377.80509490379 85.736 3 -0.9125460464689616 0.28088401443963734 1.0 ['nc|ENSG00000170703|Q8N841-4|TTLL6'] 92132 16410 RLDIERREKHK True NCI_RA007_Epitope_Rep1 1478.8429927949799 1478.84188993586 67.945 2 -0.9125841868630443 0.2809214786646275 1.0 ['THRAP3|p.K725E|1|0.09|ENSG00000054118|chr1:36296640-36296640|A/G|missense_variant'] 46982 10242 ITQEETESLRR True H1975_Epitope_Rep1 1360.6946567954399 1360.6935499358601 44.339 2 -0.912688231892477 0.2809925325838362 1.0 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'ENST00000483302.5_1_9:130241670-130248115:+|nuORF', 'ENST00000498513.5_1_9:130241670-130248879:+|nuORF'] 25125 6785 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 32.718 2 -0.9127046451202458 0.2809925325838362 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 135463 21220 WIEIAYGT True PC9_epitope_Rep3 951.4701831820299 951.46908993586 86.912 2 -0.9127175475101611 0.2809925325838362 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1', 'nc|ENSG00000136636|Q9Y597-2|KCTD3', 'ENSG00000136636|ENST00000259154|KCTD3'] 138587 20237 YIDKLEYL True NCI_RA007_Epitope_Rep1 1055.55391280599 1055.55280993586 82.922 2 -0.9127484235918365 0.28100243858754803 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 83506 19070 PTSSLINKVV True PC9_epitope_Rep5 1056.61791004488 1056.6168099358601 78.382 2 -0.9127558810755807 0.28100460143829387 1.0 ['ENST00000341307.6_1_11:63526292-63526517:+|nuORF'] 68659 13656 LTISGYLRPA True PC9_epitope_Rep4 1089.61824439805 1089.6171499358602 60.419 2 -0.9127761546583925 0.28100460143829387 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 105188 8977 SRGGAGHK True H1975_Epitope_Rep2 768.39908393044 768.39798993586 39.484 2 -0.9128199216239267 0.28100460143829387 1.0 ['nc|ENSG00000187595|Q66K41|ZNF385C', 'ENSG00000187595|ENST00000692273|ZNF385C', 'nc|ENSG00000187595|Q66K41-2|ZNF385C', 'ENST00000461831.1_1_17:40178917-40180633:-|nuORF'] 105248 22636 SRKLCKKMK True PC9_epitope_Rep6 1120.6572898424 1120.65618993586 100.11 2 -0.9128692274671644 0.2810442209670754 1.0 ['nc|ENSG00000065485|Q14554-2|PDIA5', 'ENSG00000065485|ENST00000316218|PDIA5'] 103905 11301 SQAHRNFLEDG True H1975_Epitope_Rep1 1272.58471242364 1272.58417496793 48.446 1 -0.9128720233978463 0.2810442209670754 1.0 ['ENSG00000116209|ENST00000234831|TMEM59'] 101282 14388 SLIEKHKF True PC9_epitope_Rep4 1000.57056592964 1000.56946993586 63.253 2 -0.9128798034951513 0.2810442209670754 1.0 ['ENST00000448876.5_1_3:185009682-185009805:+|nuORF'] 83425 7403 PTLTASQAQMY True NCI_RA007_Epitope_Rep2 1209.5699738762899 1209.5688699358602 33.422 2 -0.9129141378315618 0.2810442209670754 1.0 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3', 'nc|ENSG00000173889|Q8NDX5-4|PHC3', 'ENST00000474275.5_1_3:169866840-169896704:-|nuORF', 'nc|ENSG00000173889|Q8NDX5-3|PHC3'] 46156 12032 ISLHKKNMAR True H1975_Epitope_Rep3 1196.6811960911198 1196.68008993586 51.442 2 -0.912935819490747 0.28104638188255066 1.0 ['ENSG00000277481|ENST00000620267|PKD1L3'] 34969 8719 GQRPRQGRPAT True NCI_RA007_Epitope_Rep2 1222.6643001570199 1222.66320993586 38.562 2 -0.9129491819891221 0.28104638188255066 1.0 ['ENST00000259089.8_1_8:11400798-11403598:+|nuORF'] 119651 13922 VAVAVSGW True H1975_Epitope_Rep1 787.42283906679 787.42229496793 58.703 1 -0.9129607520900884 0.28104638188255066 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.A3567S|1|0.29|ENSG00000008710|chr16:2093933-2093933|C/A|missense_variant'] 142061 27296 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 114.28 3 -0.9129724213552488 0.2810562856434416 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 84570 6072 QAYDRQKNP True NCI_RA007_Epitope_Rep2 1118.54687036294 1118.54576993586 28.224 2 -0.913065670037322 0.2810661891314829 1.0 ['nc|ENSG00000275410|P35680-3|HNF1B', 'nc|ENSG00000275410|P35680-4|HNF1B', 'nc|ENSG00000275410|P35680-2|HNF1B', 'ENSG00000275410|ENST00000617811|HNF1B'] 113679 16873 TLWTPLTPNY True PC9_epitope_Rep5 1204.6128246644398 1204.61172993586 69.912 2 -0.9130661947970796 0.28107222061517695 1.0 ['ENSG00000170684|ENST00000303809|ZNF296'] 49917 21744 KIIPWRLYT True PC9_epitope_Rep2 1188.70191445236 1188.70027490379 89.112 3 -0.9130672920007357 0.28107222061517695 1.0 ['ENST00000469797.5_1_14:75137455-75152321:-|nuORF', 'nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1'] 63076 7425 LLQLPRRWEER True NCI_RA007_Epitope_Rep4 1494.8419301658203 1494.84028490379 35.205 3 -0.9131054034511901 0.28109589795862144 1.0 ['ENST00000258415.8_1_2:219646678-219646789:+|nuORF'] 27406 23711 FLWKKKLRQ True NCI_RA007_Epitope_Rep1 1245.7709970716899 1245.7693649037901 97.904 3 -0.913123896417313 0.28110192837465564 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 106244 3396 STEPPYSQK True NCI_RA007_Epitope_Rep4 1035.48728979815 1035.48618993586 18.919 2 -0.9131251698225719 0.28110192837465564 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000401075.3_1_1:31961199-31961370:-|nuORF', 'ENST00000443590.1_1_2:107314616-107314670:-|nuORF'] 85645 22746 QGLRGVLQG True PC9_epitope_Rep4 926.5297637468198 926.52866993586 95.711 2 -0.9131571198618763 0.28111183041555904 1.0 ['ENSG00000138080|ENST00000380320|EMILIN1'] 113550 6723 TLTSAGLL True NCI_RA007_Epitope_Rep2 774.44871946146 774.44762993586 30.765 2 -0.9131793854433705 0.281113988210016 1.0 ['ENST00000553886.1_1_14:51902791-51902986:+|nuORF'] 94463 23410 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 96.51 2 -0.9132085830366765 0.281113988210016 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 136083 25382 WRKVLLKG True PC9_epitope_Rep3 998.6389202729798 998.6378299358599 103.05 2 -0.9132373486639979 0.281113988210016 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 123877 23674 VGRRPRPFQE True H1975_Epitope_Rep1 1240.678887592 1240.6777899358601 98.297 2 -0.9132964542117052 0.28115143585152536 1.0 ['ENST00000554150.5_1_12:57146238-57157040:+|nuORF', 'ENST00000556650.5_3_12:57146238-57157040:+|nuORF'] 42188 11063 IDRETDFFPER True NCI_RA007_Epitope_Rep2 1423.67319307487 1423.6720899358602 47.628 2 -0.9133067267390552 0.28116349212907493 1.0 ['nc|ENSG00000071967|Q53TN4-2|CYBRD1'] 20170 7476 ENFLETIGVKD True NCI_RA007_Epitope_Rep2 1263.63468230783 1263.63358993586 33.708 2 -0.9133073448025459 0.28116349212907493 1.0 ['ENST00000481194.1_1_7:45113793-45115653:+|nuORF', 'nc|ENSG00000136280|Q9BSQ5-3|CCM2', 'nc|ENSG00000136280|Q9BSQ5-4|CCM2', 'ENSG00000136280|ENST00000258781|CCM2', 'nc|ENSG00000136280|Q9BSQ5-2|CCM2', 'ENST00000461377.5_1_7:45039147-45115653:+|nuORF'] 85018 6441 QEGSEYWDRET True NCI_RA007_Epitope_Rep1 1398.56878757598 1398.56768993586 29.075 2 -0.9133156763113739 0.28116349212907493 1.0 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 116972 8008 TVGLPKEVK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.595 2 -0.9133223711685294 0.28116349212907493 1.0 ['GGA1|p.E128K|1|0.07|ENSG00000100083|chr22:37620316-37620316|G/A|missense_variant'] 72716 9631 MNECRNWQDN True PC9_epitope_Rep5 1308.4975542953598 1308.49644993586 42.01 2 -0.9133733880381929 0.28120093651012257 1.0 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 94457 22038 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 91.099 2 -0.9134238863696468 0.28122460784178704 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 89922 5370 RCRRFWSRWEQ True NCI_RA007_Epitope_Rep2 1608.7844323730399 1608.78221987172 25.506 4 -0.913467889767333 0.28123450669310857 1.0 ['ENSG00000173714|ENST00000311378|WFIKKN2'] 32423 16360 GFTGDGFT True PC9_epitope_Rep3 800.33408363204 800.3335349679301 68.064 1 -0.9135087983600007 0.2812405321287906 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.C1447R|1|0.34|ENSG00000138829|chr5:128330579-128330579|A/G|missense_variant'] 136078 24899 WRKVLLKG True NCI_RA007_Epitope_Rep1 998.6389202729798 998.6378299358599 103.06 2 -0.9135110439670782 0.2812405321287906 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 136081 23774 WRKVLLKG True NCI_RA007_Epitope_Rep3 998.6389202729798 998.6378299358599 103.04 2 -0.9135189388451601 0.28125043035185565 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 37209 15026 GVRCAGGH True NCI_RA007_Epitope_Rep4 755.3496912098699 755.3491449679301 65.312 1 -0.9135531327751527 0.2812702259801424 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B'] 61834 5427 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 26.268 2 -0.9135689305490936 0.2812702259801424 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 25163 27638 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 113.26 2 -0.913631956878845 0.28128614706692373 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 136085 25600 WRKVLLKG True PC9_epitope_Rep5 998.6389202729798 998.6378299358599 103.79 2 -0.9136623542015112 0.28128614706692373 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 116061 23653 TSPPQPAARP True PC9_epitope_Rep4 1020.5352430500799 1020.53414993586 99.324 2 -0.9136671119805484 0.28128614706692373 1.0 ['CON__Q58D62'] 131313 14813 VTGGYDYD True PC9_epitope_Rep6 888.350127619 888.34902993586 68.951 2 -0.9136824258860102 0.28129217041667814 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 67366 16865 LSSILKVPE True PC9_epitope_Rep1 984.5855472874399 984.58444993586 69.696 2 -0.9137611756298323 0.28129217041667814 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 72505 8368 M[Oxidation]LEERDRLLDT True H1975_Epitope_Rep1 1405.6871292672897 1405.68602993586 37.115 2 -0.9137980359236629 0.2813020668383295 1.0 ['nc|ENSG00000131626|Q13136-2|PPFIA1', 'ENSG00000131626|ENST00000253925|PPFIA1'] 84600 9025 QDALKLFPK True H1975_Epitope_Rep1 1058.6124307416198 1058.61132993586 39.621 2 -0.9138667382938633 0.2813808107512668 1.0 ['TATDN3|p.N260D|1|0.07|ENSG00000203705|chr1:212815109-212815109|A/G|missense_variant'] 81284 6655 PLAAGQSRLRH True H1975_Epitope_Rep1 1204.6788875920001 1204.6777899358601 30.649 2 -0.9138853025817468 0.2813907056798623 1.0 ['nc|ENSG00000101182|O14818-4|PSMA7', 'ENST00000484488.5_1_20:60714188-60718428:-|nuORF'] 114338 8743 TPRNNISL True PC9_epitope_Rep5 913.4981292653699 913.49702993586 38.572 2 -0.9139208084888057 0.281414369509542 1.0 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 64639 12264 LPTNPEESWQV True NCI_RA007_Epitope_Rep2 1298.61428121642 1298.6131899358602 52.304 2 -0.9139762876521298 0.28141865844255975 1.0 ['nc|ENSG00000130558|Q99784-5|OLFM1', 'nc|ENSG00000130558|Q99784-3|OLFM1', 'ENSG00000130558|ENST00000371793|OLFM1', 'nc|ENSG00000130558|Q99784-4|OLFM1', 'nc|ENSG00000130558|Q99784-2|OLFM1'] 138633 12849 YIFDLFYKR True NCI_RA007_Epitope_Rep3 1263.6651945904698 1263.66355490379 57.796 3 -0.9139799351825268 0.28141865844255975 1.0 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000471813.1_1_7:99008715-99013888:+|nuORF', 'ENST00000466798.1_1_7:99013792-99015269:+|nuORF'] 42849 11566 IEQMQKIEENR True NCI_RA007_Epitope_Rep1 1416.7031133041598 1416.7020099358601 48.958 2 -0.9140036220567264 0.28141865844255975 1.0 ['ENSG00000138050|ENST00000505747|THUMPD2', 'ENST00000460072.5_1_2:39996735-39997113:-|nuORF', 'nc|ENSG00000138050|Q9BTF0-2|THUMPD2'] 119071 12563 VAGLCNPETVP True NCI_RA007_Epitope_Rep1 1098.53794547202 1098.5368499358601 52.846 2 -0.914017890613891 0.28141865844255975 1.0 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 86639 12336 QLFRIRWMHFL True NCI_RA007_Epitope_Rep1 1545.83909371485 1545.8379899358602 51.957 2 -0.9140351092034652 0.28141865844255975 1.0 ['ENST00000393346.7_1_11:85723404-85725959:-|nuORF'] 136082 23979 WRKVLLKG True NCI_RA007_Epitope_Rep3 998.6389202729798 998.6378299358599 103.88 2 -0.9140356092175212 0.28141865844255975 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 3137 11071 AGASQAKAYK True PC9_epitope_Rep5 993.5243440132098 993.52324993586 47.573 2 -0.914076494478978 0.2814698552999325 1.0 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 136171 20072 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 84.142 2 -0.9141219275246707 0.2814917811613756 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 25140 25547 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 111.43 2 -0.914143481438508 0.2814917811613756 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 81245 6007 PKKKKPLKLGP True PC9_epitope_Rep3 1232.8332629750798 1232.83216993586 28.158 2 -0.914161398994017 0.2814917811613756 1.0 ['ENSG00000104332|ENST00000220772|SFRP1'] 55725 11058 LALLYWRMFR True PC9_epitope_Rep3 1367.75363275539 1367.7525299358601 47.532 2 -0.9141702818097297 0.2814917811613756 1.0 ['nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3'] 59041 18982 LEVRNSKSI True H1975_Epitope_Rep1 1044.5927579262 1044.5916699358602 79.144 2 -0.9141706763166655 0.2814917811613756 1.0 ['nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1'] 129165 21410 VQRVLCLR True PC9_epitope_Rep6 985.5855048011298 985.58440993586 95.227 2 -0.9141982666521565 0.2815016726551852 1.0 ['ENST00000381222.8_2_X:2404887-2405136:-|nuORF'] 129919 21742 VRSVILQGSG True PC9_epitope_Rep6 1014.5821932424999 1014.58108993586 96.523 2 -0.9142595941649464 0.2815214548257871 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 72458 17734 MKVLFLIP True H1975_Epitope_Rep2 959.58779621691 959.58668993586 73.536 2 -0.9143174380158474 0.2815214548257871 1.0 ['ENSG00000102572|ENST00000539966|STK24', 'nc|ENSG00000102572|Q9Y6E0|STK24'] 22400 7542 ETEIWTPR True H1975_Epitope_Rep3 1030.5083595958997 1030.5072699358602 33.993 2 -0.9143754474642162 0.2815726439250021 1.0 ['nc|ENSG00000162739|Q96DU3-3|SLAMF6', 'nc|ENSG00000162739|Q96DU3-2|SLAMF6', 'ENSG00000162739|ENST00000368057|SLAMF6'] 127946 21346 VPGYTMLPEP True H1975_Epitope_Rep3 1102.53688284286 1102.53578993586 89.189 2 -0.914389254104812 0.28158253376099557 1.0 ['SPRR3|p.K148M|1|0.26|ENSG00000163209|chr1:153003463-153003463|A/T|missense_variant'] 91360 8601 RHAVPVAL True PC9_epitope_Rep5 861.5184707871299 861.51736993586 38.025 2 -0.9144219325823104 0.2815846708696969 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF', 'ENST00000487121.1_1_2:47136034-47168791:-|nuORF'] 79359 16471 PASDTYVVFGE True H1975_Epitope_Rep3 1183.53971929383 1183.5386299358602 68.844 2 -0.9144261080678915 0.2815846708696969 1.0 ['ENSG00000136274|ENST00000490531|NACAD'] 16466 14420 EELHGPGPV True PC9_epitope_Rep5 933.4555957470499 933.45448993586 60.466 2 -0.9144360257975868 0.2815846708696969 1.0 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'ELP5|p.R263Kfs*6|1|0.25|ENSG00000170291|chr17:7258873-7258876|AGAG/-|frameshift_variant', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5'] 25714 17337 FESFEYIHILL True H1975_Epitope_Rep1 1409.72310338941 1409.7225749679299 72.153 1 -0.9144723204747538 0.2815906838453915 1.0 ['ENST00000262056.13_1_12:53434781-53434886:+|nuORF'] 25568 17408 FEKLDDYAS True H1975_Epitope_Rep1 1086.4869554449797 1086.4858499358602 72.436 2 -0.9144743602766412 0.2815906838453915 1.0 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2', 'nc|ENSG00000109854|Q9BUP3-2|HTATIP2'] 25000 317 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 1.6944 2 -0.9145167986729025 0.28160057261627824 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 29748 12605 FVNLKTVL True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56840993586 56.827 2 -0.9145328713626782 0.2816065849059201 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B'] 46856 12200 ITKIHSKRF True H1975_Epitope_Rep1 1128.67676233368 1128.67566993586 51.947 2 -0.9145681516553373 0.2816065849059201 1.0 ['ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 3320 17715 AGGGRVLAQ True PC9_epitope_Rep6 827.4613498338299 827.46024993586 80.774 2 -0.9145811588348757 0.28161647304960635 1.0 ['ENST00000493850.1_1_7:2563236-2564953:+|nuORF'] 139596 21147 YLWRNYAF True PC9_epitope_Rep4 1131.5501648382299 1131.5490699358602 89.505 2 -0.9146276846453724 0.28162636092109067 1.0 ['ENST00000251636.9_1_5:54566241-54566439:-|nuORF'] 23427 12244 EVTDKYFH True H1975_Epitope_Rep3 1037.48181049489 1037.4807099358602 52.271 2 -0.914693057648586 0.28163624852038427 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.P3771S|1|0.1|ENSG00000138759|chr4:78539306-78539306|C/T|missense_variant'] 10457 21487 CIKLQAFV True PC9_epitope_Rep4 920.5153595526399 920.5142699358599 90.836 2 -0.9147100409983288 0.2816521463864459 1.0 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM'] 109059 8082 TAKPKAAKP True NCI_RA007_Epitope_Rep5 910.5600012459398 910.55890993586 37.775 2 -0.9147297621110663 0.2816521463864459 1.0 ['ENSG00000168298|ENST00000304218|H1-4'] 40371 7901 HQSLKKKYR True NCI_RA007_Epitope_Rep1 1186.69347502698 1186.69183490379 34.726 3 -0.9147359211232312 0.2816521463864459 1.0 ['nc|ENSG00000181982|Q6ZUS6|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-5|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-4|CCDC149', 'ENSG00000181982|ENST00000635206|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-3|CCDC149', 'ENST00000324309.8_1_4:24833126-24981729:-|nuORF', 'nc|ENSG00000181982|Q6ZUS6-2|CCDC149'] 101513 12115 SLLEERRTPP True H1975_Epitope_Rep3 1196.65133543148 1196.6502299358601 51.765 2 -0.9148024695382121 0.28168955930523826 1.0 ['ENSG00000086015|ENST00000361297|MAST2', 'nc|ENSG00000086015|Q6P0Q8-2|MAST2'] 20973 16853 EQQKWVSRLVK True H1975_Epitope_Rep3 1399.79358299107 1399.7924899358602 70.377 2 -0.9148189066649265 0.2816994453543264 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 17311 7382 EHAKGYRNR True H1975_Epitope_Rep2 1129.5740881702898 1129.57243490379 33.335 3 -0.9148542602839685 0.2817093311312964 1.0 ['ENSG00000145414|ENST00000274054|NAF1'] 25121 3395 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 18.915 2 -0.9149162825953712 0.28174887151822087 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 42317 4729 IDYFFFFKQQK True H1975_Epitope_Rep3 1509.7656369077297 1509.76399490379 23.315 3 -0.9149166409900389 0.28174887151822087 1.0 ['ENST00000246949.9_1_16:3704910-3705863:+|nuORF', 'ENST00000571460.5_1_16:3704910-3712757:+|nuORF'] 25141 25621 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 111.77 2 -0.9149414249265384 0.28174887151822087 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 84580 23402 QCHACDCD True H1975_Epitope_Rep2 893.2466082339299 893.24550993586 96.479 2 -0.9149588237948184 0.28174887151822087 1.0 ['ENSG00000172037|ENST00000305544|LAMB2'] 14446 8668 DTEKLKMYHSL True H1975_Epitope_Rep3 1363.68058695443 1363.6794899358601 38.34 2 -0.9150442838812434 0.281809924861696 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 64632 13182 LPTIQKSL True PC9_epitope_Rep1 898.5487678559 898.54766993586 55.568 2 -0.9150636813739104 0.281809924861696 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 3703 18715 AGRRSRAQPV True NCI_RA007_Epitope_Rep1 1096.62137271588 1096.62077496793 76.938 1 -0.9152216653051077 0.2818748537850744 1.0 ['ENST00000417536.5_1_22:38035396-38035618:+|nuORF'] 74108 7763 NDTLEQKK True H1975_Epitope_Rep3 974.5032742154599 974.50216993586 34.845 2 -0.9153493563423959 0.2818847360598888 1.0 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'ENSG00000213186|ENST00000309784|TRIM59'] 12297 3474 DINKNLWEKM True NCI_RA007_Epitope_Rep1 1289.64380752289 1289.64217490379 17.419 3 -0.9153799765437554 0.28192214011476696 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 55603 5640 LAIDHIRRTM True NCI_RA007_Epitope_Rep1 1224.67611071068 1224.67447490379 25.999 3 -0.9154017016144248 0.281928141899795 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2'] 23814 6670 EYHWHDGVK True H1975_Epitope_Rep3 1169.5254066423702 1169.5243099358602 30.61 2 -0.9154093057307771 0.281928141899795 1.0 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'ENST00000485659.1_1_10:13240798-13246428:+|nuORF'] 128880 12448 VQEQEYRTHR True NCI_RA007_Epitope_Rep1 1344.6534606897999 1344.6523699358602 52.398 2 -0.9154422468426673 0.28193802289740205 1.0 ['ENSG00000184828|ENST00000590800|ZBTB7C'] 22968 14018 EVERLWKHL True H1975_Epitope_Rep1 1208.6665915728 1208.66548993586 59.081 2 -0.9155373832014361 0.2819479036230787 1.0 ['ACTRT2|p.D85E|1|0.12|ENSG00000169717|chr1:3021941-3021941|C/A|missense_variant'] 101744 20991 SLNKRESVI True PC9_epitope_Rep4 1044.5927579262 1044.5916699358602 88.902 2 -0.9156049955045357 0.2820128243938685 1.0 ['PEG3|p.G1199Vfs*8|1|0.27|ENSG00000198300|chr19:56814846-56814846|C/-|frameshift_variant', 'nc|ENSG00000198300|Q9GZU2-2|PEG3', 'nc|ENSG00000198300|Q9GZU2-4|PEG3', 'ENSG00000198300|ENST00000326441|PEG3', 'PEG3|p.Y757Mfs*26|1|0.16|ENSG00000198300|chr19:56816174-56816174|G/-|frameshift_variant', 'nc|ENSG00000198300|Q9GZU2-3|PEG3'] 85530 8635 QGANIKQL True PC9_epitope_Rep5 870.4923156089401 870.49120993586 38.157 2 -0.9156256508567383 0.28202270381836947 1.0 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH'] 117777 15200 TVVVLQKLN True PC9_epitope_Rep2 1012.62808080576 1012.62698993586 63.728 2 -0.9156982814436427 0.2820601023721724 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644', 'ZNF644|p.I882Mfs*40|1|0.08|ENSG00000122482|chr1:90938654-90938708|CTGACCTTCCACTTTGCTCTTAAATAAAGGGAATAAATTTACATGCTCTTGATTA/-|frameshift_variant'] 44486 23274 ILLFRRPLPK True PC9_epitope_Rep3 1251.8179472641098 1251.81631490379 94.8 3 -0.9157149945827036 0.28206221879772697 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 46531 9247 ISYRAQSIH True PC9_epitope_Rep5 1073.56179215109 1073.5606899358602 40.515 2 -0.9157288254837137 0.28206221879772697 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.A516Qfs*19|1|0.53|ENSG00000103197|chr16:2064373-2064373|G/-|frameshift_variant'] 42625 10245 IEGTLGVL True NCI_RA007_Epitope_Rep2 800.4643695255999 800.46382496793 44.443 1 -0.9157422471398596 0.28206221879772697 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 79028 7243 PALGQLKE True H1975_Epitope_Rep2 854.48616759934 854.48506993586 32.794 2 -0.9157760454906143 0.2820858558062741 1.0 ['ENST00000485470.1_1_1:150129349-150129586:+|nuORF'] 121421 14190 VEVVEETI True PC9_epitope_Rep5 916.4753281321199 916.47422993586 59.589 2 -0.9158109854569867 0.28209573341038235 1.0 ['ENSG00000145996|ENST00000274695|CDKAL1', 'nc|ENSG00000145996|Q5VV42-2|CDKAL1'] 119005 4667 VAETTRESP True H1975_Epitope_Rep2 988.48253877088 988.48144993586 23.048 2 -0.9158314798104344 0.2821056107426873 1.0 ['ENST00000558114.1_1_14:24768105-24768312:-|nuORF'] 135239 25403 WFIFKTIPFKI True PC9_epitope_Rep1 1438.8376796491796 1438.83658993586 102.68 2 -0.9158746665607571 0.28211548780320017 1.0 ['ENST00000334218.9_1_1:227504950-227505052:-|nuORF'] 55833 16595 LAPLATAPG True PC9_epitope_Rep5 809.4647038787699 809.46360993586 68.838 2 -0.9159684437032299 0.28213524110889454 1.0 ['ENSG00000135537|ENST00000368977|AFG1L', 'ENST00000430458.1_1_6:108616211-108666050:+|nuORF'] 45494 16879 IQMWLTGL True PC9_epitope_Rep6 960.5102741722 960.50916993586 77.443 2 -0.9159803075575709 0.28213524110889454 1.0 ['ENST00000561123.2_1_15:77864640-77900952:+|nuORF'] 34162 17549 GNFKFWDTEL True PC9_epitope_Rep3 1255.5873381925899 1255.58624993586 72.688 2 -0.9159943982221832 0.2821549933275551 1.0 ['ENST00000262394.6_2_17:25639733-25639799:+|nuORF'] 11265 6990 DEGDEYDD True PC9_epitope_Rep3 956.2883152080799 956.28776496793 31.899 1 -0.9160002489883802 0.2821549933275551 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB'] 119579 24695 VATIKETGL True PC9_epitope_Rep2 930.5385970950199 930.53750993586 100.67 2 -0.9160709089907249 0.28215710551657724 1.0 ['ENST00000392557.8_1_14:105676521-105676869:-|nuORF'] 54334 17603 KYEDLYAFSYN True H1975_Epitope_Rep1 1411.6295969273897 1411.62907496793 73.243 1 -0.9160922350988102 0.28215710551657724 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 71059 19044 LYKNRVEF True PC9_epitope_Rep3 1067.5763795860698 1067.5752899358602 78.473 2 -0.9161185620740185 0.28215710551657724 1.0 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 88741 5300 QTLQESEVPVP True H1975_Epitope_Rep3 1225.6190322436898 1225.61792993586 25.465 2 -0.9161605015183223 0.2821592175312616 1.0 ['ENSG00000166261|ENST00000530393|ZNF202'] 100950 12945 SLFKRYRHEFK True NCI_RA007_Epitope_Rep2 1509.8204664452498 1509.81936993586 54.975 2 -0.9161685591036447 0.2821592175312616 1.0 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 24998 125 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 0.68536 2 -0.9162194424768445 0.2821592175312616 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 89969 11379 RDGDRLWYENP True PC9_epitope_Rep1 1419.6531263366296 1419.6520299358601 48.65 2 -0.9162910984535467 0.28217896691656924 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 61299 17713 LIQDYFRKFKK True NCI_RA007_Epitope_Rep1 1484.8503695911998 1484.84926993586 73.037 2 -0.9163081323511855 0.28217896691656924 1.0 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 29977 26144 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 108.14 3 -0.9163382091125446 0.28218495948938743 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 98341 7248 SEYFYQEEFYI True NCI_RA007_Epitope_Rep3 1516.63982725792 1516.63872993586 35.619 2 -0.9163833365699556 0.28218495948938743 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 59760 5672 LGEDRHSCL True PC9_epitope_Rep4 1028.47092854136 1028.4698299358602 28.625 2 -0.9164253149284926 0.2822085889570552 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|2.6725304530072744|0.0003248618387484|13.01|528.0|9|2|sense'] 122504 11620 VGELRYREF True NCI_RA007_Epitope_Rep5 1167.6036569630699 1167.60254993586 51.349 2 -0.9164895793248392 0.282242090784044 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 71148 4665 LYLQALLYKK True NCI_RA007_Epitope_Rep2 1251.7590949753096 1251.75745490379 22.771 3 -0.9165025414166103 0.282242090784044 1.0 ['PF4V1|p.D88Y|1|0.24|ENSG00000109272|chr4:73854069-73854069|G/T|missense_variant'] 84821 9092 QEAERILLRTQ True H1975_Epitope_Rep2 1355.7521121019097 1355.75047490379 39.923 3 -0.9165760296338491 0.28224808120821987 1.0 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1'] 136322 25037 WSWGCAGF True PC9_epitope_Rep6 912.3588589112398 912.35776993586 111.31 2 -0.9165961945625244 0.28224808120821987 1.0 ['ENST00000390624.3_1_14:106994224-106994287:-|nuORF'] 121361 12772 VEVMCIVP True PC9_epitope_Rep1 888.4448970343199 888.44378993586 54.001 2 -0.9166481467313239 0.28228546277320055 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF', 'ENST00000511019.1_1_5:14480069-14481814:+|nuORF'] 57109 10365 LDSTKMEVKGQ True NCI_RA007_Epitope_Rep2 1234.62273772514 1234.6216499358602 44.909 2 -0.9166777483494178 0.28229533450704225 1.0 ['CCDC120|p.R431Efs*203|1|0.25|ENSG00000147144|chrX:49067508-49067508|C/-|frameshift_variant', 'ENSG00000147144|ENST00000603986|CCDC120', 'ENST00000482476.1_1_X:48919453-48920147:+|nuORF'] 25165 15496 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 64.879 2 -0.9167356034092208 0.2823150771600693 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 60835 16056 LHVAAKEI True PC9_epitope_Rep3 879.51780208079 879.51670993586 66.911 2 -0.9167375760507451 0.2823150771600693 1.0 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000463212.1_1_1:896835-897009:+|nuORF'] 15862 5602 EDFWNRIRQEQ True PC9_epitope_Rep4 1519.71678922235 1519.7151449037901 28.34 3 -0.9167737466513384 0.2823506759637469 1.0 ['ENST00000476464.5_1_3:64008316-64008487:-|nuORF'] 74102 13072 NDRRFYSERYK True NCI_RA007_Epitope_Rep1 1532.7484237038 1532.74732993586 54.84 2 -0.9167818016094123 0.2823506759637469 1.0 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 77868 10238 NVFLRHERFER True H1975_Epitope_Rep3 1501.7902289461297 1501.78912993586 44.428 2 -0.9168051100195705 0.2823506759637469 1.0 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1'] 26117 7592 FGSPHGPS True NCI_RA007_Epitope_Rep2 784.35040240252 784.34930993586 34.154 2 -0.9168347813652485 0.2823506759637469 1.0 ['GATA6|p.A90S|1|0.12|ENSG00000141448|chr18:22171412-22171412|G/T|missense_variant'] 92614 20052 RMYSLLQL True PC9_epitope_Rep1 1022.5582869937798 1022.5577749679301 81.956 1 -0.916850071512745 0.2823506759637469 1.0 ['ENST00000496776.5_1_1:219347220-219366465:+|nuORF'] 56914 10978 LDQEIYVNK True NCI_RA007_Epitope_Rep1 1120.5764391557198 1120.57534993586 46.697 2 -0.91685906523339 0.2823704151939818 1.0 ['KIF14|p.E1019D|1|0.37|ENSG00000118193|chr1:200589274-200589274|T/A|missense_variant'] 64103 11307 LPDPVLGA True NCI_RA007_Epitope_Rep5 780.4381547777599 780.43704993586 50.138 2 -0.9168690617589008 0.2823704151939818 1.0 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 72179 4013 MGLAEESK True NCI_RA007_Epitope_Rep2 863.40586867331 863.40476993586 20.248 2 -0.9168947775717499 0.28239015333837586 1.0 ['ENST00000406175.3_1_2:42515422-42522275:+|nuORF'] 20246 10692 ENLTYLQLK True NCI_RA007_Epitope_Rep2 1120.61282466444 1120.61172993586 46.19 2 -0.9169159593334592 0.28239015333837586 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 104137 6720 SQEMNTLFRFW True NCI_RA007_Epitope_Rep2 1457.6761702803296 1457.6750699358602 30.753 2 -0.9169374808318252 0.2823961384545567 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 94461 22640 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 93.525 2 -0.9169608596765335 0.2823961384545567 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 97943 19031 SENLQVKLV True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 78.423 2 -0.9170081727491564 0.2824140918278949 1.0 ['ENSG00000196793|ENST00000374446|ZNF239'] 96979 19054 SAYHHSIF True PC9_epitope_Rep3 960.44536541652 960.44426993586 78.513 2 -0.9170429402400155 0.2824140918278949 1.0 ['ENST00000263277.7_1_19:48246012-48246210:+|nuORF'] 46288 9366 ISPVENSK True H1975_Epitope_Rep1 872.46034677432 872.45924993586 40.934 2 -0.917075333853612 0.2824140918278949 1.0 ['EPAS1|p.G792V|1|0.06|ENSG00000116016|chr2:46382512-46382512|G/T|missense_variant'] 115726 10691 TSALSKKP True PC9_epitope_Rep3 830.48616759934 830.48506993586 46.07 2 -0.9170824752717354 0.2824140918278949 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENSG00000135314|ENST00000257765|KHDC1'] 71512 7526 LYYYRDRDWRW True H1975_Epitope_Rep1 1690.8004592766597 1690.79936993586 33.946 2 -0.9170894854748868 0.2824140918278949 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 99986 5618 SIPGPEGDP True H1975_Epitope_Rep3 867.3974121645899 867.39630993586 26.646 2 -0.9170941451963803 0.2824140918278949 1.0 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 13010 8037 DLMRELGLSP True H1975_Epitope_Rep1 1129.58014463717 1129.5790499358602 35.858 2 -0.9171373422801756 0.2824514603157142 1.0 ['ENST00000515664.5_1_4:175158565-175177261:-|nuORF', 'nc|ENSG00000164117|Q9NRD0-2|FBXO8', 'ENSG00000164117|ENST00000393674|FBXO8'] 25120 3079 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 17.231 2 -0.9171530380585887 0.28247507734616706 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 71887 12712 MENLQQDYELK True NCI_RA007_Epitope_Rep5 1409.64968074897 1409.6485899358602 55.561 2 -0.917188556932824 0.28247927293726194 1.0 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 124791 5323 VHEQQMDDNE True PC9_epitope_Rep3 1243.4775300434296 1243.47589490379 25.553 3 -0.9171919508699846 0.28247927293726194 1.0 ['nc|ENSG00000005889|P17010-3|ZFX', 'ENSG00000005889|ENST00000304543|ZFX', 'nc|ENSG00000005889|P17010-2|ZFX'] 124792 5323 VHEQQMDDNE True PC9_epitope_Rep3 1243.4775300434296 1243.47589490379 25.553 3 -0.9171919508699846 0.28247927293726194 1.0 ['nc|ENSG00000005889|P17010-3|ZFX', 'ENSG00000005889|ENST00000304543|ZFX', 'nc|ENSG00000005889|P17010-2|ZFX'] 57443 12817 LEAVMEGA True PC9_epitope_Rep5 818.3844049527399 818.38330993586 54.311 2 -0.9172193637516586 0.28247927293726194 1.0 ['ENST00000368194.7_1_1:156905230-156905260:-|nuORF'] 74723 12615 NGYMWRYRHRY True PC9_epitope_Rep3 1600.74698423516 1600.74532490379 53.547 3 -0.9172312409911372 0.28247927293726194 1.0 ['ENST00000437043.7_1_5:96253823-96253934:+|nuORF'] 102688 7673 SLYRVHMP True PC9_epitope_Rep4 1001.51167115453 1001.51056993586 36.895 2 -0.9172537874034932 0.28247927293726194 1.0 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 58829 8924 LESRDQAW True PC9_epitope_Rep2 1003.4723084403498 1003.47120993586 39.684 2 -0.917269606101764 0.28248525428622495 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 118879 11233 VACRCWPP True PC9_epitope_Rep1 930.4204136219798 930.41930993586 48.087 2 -0.9172993125707062 0.28248525428622495 1.0 ['ENST00000537638.6_1_12:57881889-57881970:+|nuORF'] 47191 10783 ITYRETSL True PC9_epitope_Rep3 981.51311062317 981.51200993586 46.435 2 -0.9173943486157524 0.2825148482182138 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'nc|ENSG00000164308|Q6P179-2|ERAP2'] 64716 13594 LPWARELESRE True PC9_epitope_Rep2 1384.70991293676 1384.70880993586 57.578 2 -0.9174077227360672 0.2825148482182138 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 3635 8184 AGPLDLGG True NCI_RA007_Epitope_Rep4 698.35990445706 698.35935496793 38.267 1 -0.9174317291274777 0.2825148482182138 1.0 ['ENST00000391711.7_1_19:37406109-37407159:-|nuORF'] 46472 9390 ISVEKGYNITM True H1975_Epitope_Rep1 1253.6325741328499 1253.6314699358602 41.03 2 -0.9174339874545305 0.28252082817784374 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'CSMD3|p.K2636*|1|0.27|ENSG00000164796|chr8:112306173-112306174|-/T|frameshift_variant', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.G3441Afs*4|1|0.37|ENSG00000164796|chr8:112244476-112244476|A/-|frameshift_variant', 'CSMD3|p.I3465Ffs*10|1|0.57|ENSG00000164796|chr8:112244404-112244404|G/-|frameshift_variant', 'CSMD3|p.Y3650Ffs*51|1|0.41|ENSG00000164796|chr8:112228771-112228771|T/-|frameshift_variant'] 80294 8172 PGETLGPAAPP True H1975_Epitope_Rep3 1005.5131106231698 1005.51200993586 36.413 2 -0.917455054701507 0.28252082817784374 1.0 ['ENSG00000226490|ENST00000643770|C8orf90'] 120665 23711 VEILERRT True PC9_epitope_Rep1 1014.5821932425 1014.58108993586 95.999 2 -0.917488581920155 0.2825268078086335 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 130717 8962 VSVNERLVYT True H1975_Epitope_Rep1 1178.6295373577398 1178.62844993586 39.376 2 -0.9175023317577171 0.2825268078086335 1.0 ['nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 81640 21352 PLLLLAAPA True PC9_epitope_Rep4 877.5636896440499 877.56258993586 90.298 2 -0.9175405670580223 0.2825289031246993 1.0 ['ENST00000493548.5_1_6:32122153-32123690:+|nuORF', 'nc|ENSG00000258388|Q9UMR5-2|PPT2', 'ENSG00000221988|ENST00000324816|PPT2', 'nc|ENSG00000258388|Q9UMR5-3|PPT2'] 58314 8397 LEMEGCMP True NCI_RA007_Epitope_Rep3 908.3441970168799 908.34308993586 40.124 2 -0.917547749968602 0.2825289031246993 1.0 ['ENSG00000198643|ENST00000358781|FAM3D'] 123116 16927 VGKLLDNL True PC9_epitope_Rep4 870.51746772762 870.51636993586 73.097 2 -0.9175529613252725 0.2825289031246993 1.0 ['ENSG00000213918|ENST00000246949|DNASE1'] 37132 12712 GVQAGRGA True NCI_RA007_Epitope_Rep4 714.3772858566998 714.37673496793 55.951 1 -0.9176083706079732 0.28254862877173686 1.0 ['ENST00000464994.5_1_2:102608489-102626165:+|nuORF', 'ENST00000332549.7_1_2:102608419-102626165:+|nuORF'] 4989 17192 ALHGNGLMVLQ True PC9_epitope_Rep1 1151.61211347179 1151.61100993586 70.949 2 -0.9176282838072513 0.28254862877173686 1.0 ['LRRC32|p.Q499H|1|0.32|ENSG00000137507|chr11:76660096-76660096|C/A|missense_variant'] 43707 5754 IHDTADWKDL True NCI_RA007_Epitope_Rep1 1212.57750178488 1212.57640993586 26.438 2 -0.9176960862603829 0.2825546070628342 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2', 'ENST00000488292.1_1_9:35738625-35739104:-|nuORF'] 41151 3397 HVDRRFGWDCH True NCI_RA007_Epitope_Rep2 1426.63128577658 1426.62964490379 17.871 3 -0.9177350554574647 0.2825546070628342 1.0 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 12901 11553 DLKDVLKAL True NCI_RA007_Epitope_Rep3 1013.6120963884499 1013.61098993586 52.574 2 -0.9177839419302074 0.282564469126299 1.0 ['ENST00000488374.5_1_3:167517863-167543108:+|nuORF', 'ENSG00000163536|ENST00000446050|SERPINI1'] 88092 17587 QRRRIHSG True NCI_RA007_Epitope_Rep4 1008.5689432201998 1008.56784993586 76.09 2 -0.917799759374278 0.28258240096764436 1.0 ['ENST00000399604.4_1_17:5084193-5085186:-|nuORF'] 102516 9319 SLVNTVKA True PC9_epitope_Rep5 830.48616759934 830.48506993586 40.798 2 -0.9178482395035096 0.28258240096764436 1.0 ['nc|ENSG00000186960|Q86U37|LINC01551', 'ENST00000399387.8_1_14:29242013-29261464:+|nuORF'] 112476 19037 TLDKMIRNPA True PC9_epitope_Rep1 1157.6226781554901 1157.6215899358601 78.016 2 -0.9178911350440053 0.28258240096764436 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1', 'EPHB1|p.N876H|1|0.18|ENSG00000154928|chr3:135248445-135248445|A/C|missense_variant'] 91440 10563 RHNLGGNLGDP True H1975_Epitope_Rep2 1148.56866843668 1148.56756993586 45.652 2 -0.9179375911545039 0.28258240096764436 1.0 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1'] 136505 20504 WVVFIVVV True PC9_epitope_Rep6 959.5844250886298 959.58332993586 91.599 2 -0.9179621394423781 0.28258240096764436 1.0 ['ENSG00000140675|ENST00000330498|SLC5A2'] 128985 16720 VQLDALPFF True PC9_epitope_Rep4 1048.5593325395998 1048.55822993586 72.282 2 -0.9179769081654892 0.28258240096764436 1.0 ['nc|ENSG00000112759|Q99808-2|SLC29A1', 'ENSG00000112759|ENST00000371755|SLC29A1', 'ENST00000472176.1_1_6:44197340-44197857:+|nuORF'] 88748 7803 QTLTNLVSA True PC9_epitope_Rep2 945.51311062317 945.51200993586 35.384 2 -0.9180129525233097 0.28261975121984745 1.0 ['ENST00000454309.6_1_3:192126033-192126612:-|nuORF'] 89623 9142 QYRRVIGMFYK True PC9_epitope_Rep1 1459.7758247519498 1459.77418490379 40.015 3 -0.9180447791648518 0.2826317019200374 1.0 ['ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 98726 22756 SGGGGGGGGD True NCI_RA007_Epitope_Rep2 676.24124587636 676.24069496793 94.75 1 -0.9180591695923528 0.2826317019200374 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 136597 15371 WWNLRRTCFRI True H1975_Epitope_Rep1 1549.8088562157297 1549.80774993586 64.394 2 -0.918092384351475 0.2826317019200374 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 138749 5432 YIRSEDAL True NCI_RA007_Epitope_Rep3 965.4818104948898 965.48070993586 28.378 2 -0.9181816182521139 0.2826317019200374 1.0 ['nc|ENSG00000080802|O95628-6|CNOT4', 'nc|ENSG00000080802|O95628-8|CNOT4', 'nc|ENSG00000080802|O95628-4|CNOT4', 'nc|ENSG00000080802|O95628-9|CNOT4', 'ENSG00000080802|ENST00000541284|CNOT4', 'nc|ENSG00000080802|O95628-5|CNOT4', 'nc|ENSG00000080802|O95628-3|CNOT4', 'nc|ENSG00000080802|O95628-2|CNOT4', 'nc|ENSG00000080802|O95628|CNOT4', 'nc|ENSG00000080802|O95628-7|CNOT4'] 84318 8567 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 37.895 2 -0.9182140891687797 0.2826376767773945 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 133465 14606 VVYRDLKP True PC9_epitope_Rep4 988.5705659296399 988.56946993586 64.112 2 -0.9182495552714849 0.2826376767773945 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000526572.5_1_11:67049183-67049837:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 16402 9234 EEKEEEGQP True NCI_RA007_Epitope_Rep2 1073.4512982122499 1073.4502099358601 40.529 2 -0.9182530268663385 0.28263797273526825 1.0 ['FAM170A|p.A296E|1|0.38|ENSG00000164334|chr5:119634635-119634635|C/A|missense_variant'] 113923 6372 TNSATENDES True PC9_epitope_Rep5 1066.40507629582 1066.40396993586 29.487 2 -0.9182907193159735 0.28263797273526825 1.0 ['ENST00000457681.1_1_9:115246828-115249324:-|nuORF'] 5749 7513 APARLPAAPA True PC9_epitope_Rep3 933.5396001545298 933.53850993586 33.901 2 -0.9183060545514117 0.28263797273526825 1.0 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 46845 10098 ITIPCRVTHPQ True H1975_Epitope_Rep1 1263.6757763575101 1263.67466993586 43.778 2 -0.9183106172852435 0.28263797273526825 1.0 ['PDGFRB|p.D153H|1|0.18|ENSG00000113721|chr5:150134924-150134924|C/G|missense_variant'] 127943 9253 VPGYTANG True PC9_epitope_Rep1 777.36571811349 777.36516496793 40.444 1 -0.9183437605064632 0.28263797273526825 1.0 ['CLCA2|p.A725Sfs*9|1|0.16|ENSG00000137975|chr1:86453386-86453387|GC/-|frameshift_variant', 'ENSG00000137975|ENST00000370565|CLCA2', 'CLCA2|p.Q722L|1|0.14|ENSG00000137975|chr1:86453378-86453378|A/T|missense_variant'] 106005 11822 SSVLSHEELQ True H1975_Epitope_Rep3 1127.54586730343 1127.5447699358601 50.618 2 -0.9183531068009112 0.28263797273526825 1.0 ['nc|ENSG00000167077|Q5TIA1-5|MEI1'] 24636 13075 FAKFTFEYSRR True NCI_RA007_Epitope_Rep1 1450.7357337617798 1450.73462993586 54.852 2 -0.9183566082926421 0.28263797273526825 1.0 ['ENSG00000079557|ENST00000226355|AFM'] 101114 8669 SLGLLQIK True NCI_RA007_Epitope_Rep5 870.5538532363399 870.5533049679301 40.015 1 -0.9184166386813427 0.2826499202990161 1.0 ['L1MD2_dup3350|chr5:176309943-176310863:+|1.3301102545016334|0.265229905058228|2.33|541.0|63|3|anti-sense'] 23594 17081 EWDAFDLKTK True NCI_RA007_Epitope_Rep1 1251.6135529404298 1251.61244993586 70.572 2 -0.9184512844038545 0.2826499202990161 1.0 ['ENST00000460138.5_1_6:7882234-7882414:-|nuORF'] 20442 6204 EPGKLKTNSQP True NCI_RA007_Epitope_Rep1 1197.63535101417 1197.6337049037902 28.167 3 -0.9184570135996158 0.2826499202990161 1.0 ['nc|ENSG00000101871|O15344-2|MID1', 'ENSG00000101871|ENST00000317552|MID1'] 31636 13223 GEFGGFSEV True NCI_RA007_Epitope_Rep3 927.3974121645899 927.39686496793 59.285 1 -0.9184975897464037 0.2826499202990161 1.0 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 68130 17015 LTDPQIHSV True PC9_epitope_Rep2 1008.52400966004 1008.52290993586 70.699 2 -0.9185373674221977 0.2826597776647933 1.0 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 29180 12349 FTQVWEAMVLY True H1975_Epitope_Rep1 1385.66895964157 1385.6678699358602 52.531 2 -0.9185709640458185 0.2826833759309644 1.0 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 108016 13015 SWRWRWKLHAM True H1975_Epitope_Rep3 1555.79829153203 1555.7971899358602 55.298 2 -0.9186409834190068 0.2827030889304166 1.0 ['ENST00000471419.6_1_X:70516831-70516888:+|nuORF'] 25190 22292 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 90.754 2 -0.9186484730607526 0.2827030889304166 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 27059 21250 FLFLFWKLCWM True NCI_RA007_Epitope_Rep1 1532.7712569654798 1532.7701499358602 86.944 2 -0.9187303237421219 0.2827051759436101 1.0 ['SYT6|p.K488Sfs*12|1|0.38|ENSG00000134207|chr1:114097781-114097781|C/-|frameshift_variant', 'ENSG00000134207|ENST00000610222|SYT6', 'SYT6|p.Y304Mfs*24|1|0.26|ENSG00000134207|chr1:114137657-114137657|G/-|frameshift_variant'] 25199 14451 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 67.475 2 -0.9187697377354445 0.2827051759436101 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 66966 10470 LSPDRGLPD True PC9_epitope_Rep1 968.4927095317598 968.49160993586 45.162 2 -0.9187713948874034 0.2827051759436101 1.0 ['nc|ENSG00000188803|Q6ZSJ9|SHISA6', 'nc|ENSG00000188803|Q6ZSJ9-2|SHISA6', 'ENSG00000188803|ENST00000441885|SHISA6'] 19339 12442 ELLESSRTLP True H1975_Epitope_Rep2 1143.61355294043 1143.61244993586 52.946 2 -0.9187873650236605 0.2827150316020885 1.0 ['nc|ENSG00000134324|Q14693-6|LPIN1', 'nc|ENSG00000134324|Q14693|LPIN1', 'nc|ENSG00000134324|Q14693-2|LPIN1', 'nc|ENSG00000134324|Q14693-4|LPIN1', 'ENSG00000134324|ENST00000674199|LPIN1', 'nc|ENSG00000134324|Q14693-5|LPIN1', 'nc|ENSG00000134324|Q14693-7|LPIN1', 'LPIN1|p.A220Cfs*11|1|0.24|ENSG00000134324|chr2:11773680-11773681|GG/-|frameshift_variant', 'LPIN1|p.A220Vfs*13|1|0.25|ENSG00000134324|chr2:11773681-11773682|-/TTTT|frameshift_variant'] 129504 20853 VRKLSMKMK True NCI_RA007_Epitope_Rep2 1119.66204086967 1119.6609499358601 86.245 2 -0.9188493251723798 0.28272488698973636 1.0 ['ENST00000234668.6_1_1:85647735-85666124:-|nuORF', 'nc|ENSG00000097096|Q5VT97-2|SYDE2', 'ENSG00000097096|ENST00000341460|SYDE2'] 123383 11180 VGMKLWVE True NCI_RA007_Epitope_Rep4 960.5102741721998 960.50916993586 49.887 2 -0.9189117769745574 0.28274848176747 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 92265 22593 RLKTAAAAAA True PC9_epitope_Rep3 942.5610638750998 942.55996993586 92.174 2 -0.9189186970310715 0.28275833642471454 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 30780 18335 GALTPTPAP True PC9_epitope_Rep5 823.4439684341899 823.44286993586 75.54 2 -0.9190174614194888 0.2827819300945263 1.0 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 17048 6819 EGFSRYLGGEE True H1975_Epitope_Rep1 1242.55168095986 1242.5505899358602 31.271 2 -0.9190797530595836 0.2828016376775754 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 69044 9966 LTQKLWTA True PC9_epitope_Rep6 959.5440168286299 959.54290993586 48.876 2 -0.9190831070028318 0.2828016376775754 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 60969 17234 LIDSHFLIP True PC9_epitope_Rep1 1053.58588164061 1053.58478993586 71.108 2 -0.919146783537981 0.2828037203423594 1.0 ['ENST00000562866.1_1_16:89783858-89784437:+|nuORF'] 98727 22848 SGGGGGGGGD True NCI_RA007_Epitope_Rep2 676.24124587636 676.24069496793 95.221 1 -0.9191645560125363 0.2828037203423594 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 110751 14974 TGGGGGGD True PC9_epitope_Rep6 576.21396849936 576.2134249679301 69.608 1 -0.9191948573143781 0.2828037203423594 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 93459 13882 RQHWALEEEIR True NCI_RA007_Epitope_Rep1 1465.7426100473697 1465.74097490379 58.019 3 -0.9192269678459634 0.28282342597299115 1.0 ['SPTBN2|p.R790W|1|0.28|ENSG00000173898|chr11:66704908-66704908|G/A|missense_variant'] 22420 6780 ETENENEDNE True H1975_Epitope_Rep2 1221.4269339392097 1221.42582993586 30.994 2 -0.9192364738443678 0.28282342597299115 1.0 ['ENSG00000185052|ENST00000328041|SLC24A3'] 68560 5952 LTGRPSPSPP True H1975_Epitope_Rep2 1007.5399940773499 1007.53888993586 27.877 2 -0.9192756957366294 0.28284132587881367 1.0 ['ENST00000532094.5_1_11:420655-431830:-|nuORF', 'ENST00000525857.1_1_11:429545-429995:-|nuORF'] 89373 16251 QWTSRKRK True NCI_RA007_Epitope_Rep5 1088.6203100867199 1088.61920993586 69.263 2 -0.919279114357171 0.28284132587881367 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 37121 10581 GVPVFKYSRWR True NCI_RA007_Epitope_Rep5 1393.7618889399698 1393.7607899358602 47.334 2 -0.9192971285355427 0.28284132587881367 1.0 ['ENST00000473607.5_1_3:125854214-125879740:-|nuORF', 'nc|ENSG00000144908|O75891-4|ALDH1L1', 'ALDH1L1|p.G655Afs*5|1|0.4|ENSG00000144908|chr3:126118023-126118023|C/-|frameshift_variant', 'nc|ENSG00000144908|O75891-2|ALDH1L1', 'ENSG00000144908|ENST00000393434|ALDH1L1', 'nc|ENSG00000144908|O75891-3|ALDH1L1'] 72462 9836 MKVRIFLKK True NCI_RA007_Epitope_Rep5 1161.74200544253 1161.7403549037901 44.479 3 -0.9193065510812016 0.28284132587881367 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 99677 6283 SIGQPPLP True PC9_epitope_Rep3 807.4490538146299 807.44794993586 29.201 2 -0.9193107404481174 0.28284132587881367 1.0 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'KDM6B|p.A58D|1|0.16|ENSG00000132510|chr17:7845907-7845907|C/A|missense_variant', 'KDM6B|p.R102Gfs*96|1|0.29|ENSG00000132510|chr17:7846144-7846144|C/-|frameshift_variant'] 97892 3888 SELVKKQELRF True NCI_RA007_Epitope_Rep5 1375.7823496010299 1375.78069490379 21.234 3 -0.9193141262604231 0.28284132587881367 1.0 ['ENSG00000261739|ENST00000562295|GOLGA8S', 'ENSG00000178115|ENST00000562783|GOLGA8Q'] 55722 5957 LALLVRKLR True PC9_epitope_Rep5 1080.74953335112 1080.74842993586 27.908 2 -0.9193320537788177 0.2828434065934066 1.0 ['TANC2-CRB3|1|fusion', 'TANC2-CRB3|2|fusion', 'ENSG00000130545|ENST00000600229|CRB3', 'nc|ENSG00000130545|Q9BUF7-2|CRB3'] 65217 6332 LQRQYRSPRR True H1975_Epitope_Rep1 1358.7643485514598 1358.7627149037899 29.42 3 -0.9193482244214519 0.2828434065934066 1.0 ['ENSG00000086015|ENST00000361297|MAST2'] 59314 19946 LFHWRTRLRRK True H1975_Epitope_Rep3 1567.93241693607 1567.93130993586 83.479 2 -0.9193637064644303 0.2828434065934066 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 138253 3196 YGYERQRDYSR True NCI_RA007_Epitope_Rep1 1491.68548909407 1491.68383490379 16.323 3 -0.919463209972501 0.282853257510199 1.0 ['nc|ENSG00000114541|Q9Y2L6-2|FRMD4B', 'ENSG00000114541|ENST00000398540|FRMD4B'] 83773 25083 PVKAAAAAAAA True NCI_RA007_Epitope_Rep5 910.5236157372198 910.52250993586 103.98 2 -0.9194844454536236 0.28286310815636934 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 134249 7063 VYNDSGEDFK True NCI_RA007_Epitope_Rep2 1172.4985827578396 1172.4974899358601 32.096 2 -0.9195261982319581 0.282896544145926 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'ENST00000569930.1_1_16:2133412-2138608:+|nuORF'] 114033 11245 TPAVSAGY True H1975_Epitope_Rep1 764.37046914076 764.36992496793 48.23 1 -0.9195325619323214 0.282896544145926 1.0 ['ENSG00000171051|ENST00000304748|FPR1'] 64694 17355 LPVSILWME True PC9_epitope_Rep2 1086.57835373202 1086.5772499358602 72.01 2 -0.9195416461557065 0.28290250803505207 1.0 ['SIK2|p.Y846Ifs*32|1|0.3|ENSG00000170145|chr11:111723882-111723882|C/-|frameshift_variant'] 10618 3385 CNMRYRAF True PC9_epitope_Rep1 1059.4742400999899 1059.4731499358602 17.939 2 -0.9195437103039977 0.28290250803505207 1.0 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000553922.5_1_14:74417278-74422293:+|nuORF', 'ENST00000555196.5_1_14:74417278-74423148:+|nuORF', 'ENST00000555552.5_1_14:74417035-74423148:+|nuORF', 'ENST00000554193.5_1_14:74417035-74422669:+|nuORF'] 83619 17824 PVDLPLLFHRE True PC9_epitope_Rep6 1334.7346711326197 1334.73301490379 81.191 3 -0.919610161191066 0.28293413173652693 1.0 ['ENST00000358731.8_2_5:70754407-70754644:+|nuORF'] 52529 11468 KLEEMYEERER True PC9_epitope_Rep4 1510.7085926074199 1510.7074899358602 51.874 2 -0.9196383821451187 0.28293413173652693 1.0 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-2|KIF15', 'nc|ENSG00000163808|Q9NS87-3|KIF15'] 69081 5608 LTQWQRRYFYL True NCI_RA007_Epitope_Rep2 1572.8201320920798 1572.81847490379 26.43 3 -0.9196822452185132 0.28293413173652693 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67049840-67052918:+|nuORF', 'ENST00000524899.1_1_11:67051750-67052658:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 89214 8636 QVTNLVPG True PC9_epitope_Rep5 826.4548674710599 826.45431496793 38.161 1 -0.9196926327296858 0.28293413173652693 1.0 ['ENSG00000110375|ENST00000264031|UPK2'] 18464 9637 EKAVAKYL True H1975_Epitope_Rep2 920.5331177917599 920.53202993586 42.047 2 -0.9197036206650909 0.28293413173652693 1.0 ['ENSG00000008952|ENST00000337002|SEC62'] 6107 21615 APMGALWGL True PC9_epitope_Rep3 914.4684093602199 914.46730993586 88.439 2 -0.9197199136980513 0.28293413173652693 1.0 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19', 'nc|ENSG00000155229|Q96T76-6|MMS19'] 25110 14422 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 64.041 2 -0.9198103779916897 0.2829812948059439 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 90029 11306 RDSEYEIQR True NCI_RA007_Epitope_Rep5 1194.5629143498998 1194.56180993586 50.134 2 -0.919824148467014 0.2829812948059439 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC'] 25179 15105 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 66.03 2 -0.9199053415155884 0.28301860880313123 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 77957 7456 NVLNVYFVK True NCI_RA007_Epitope_Rep5 1094.61243074162 1094.61132993586 35.359 2 -0.9200306180637106 0.28309712151175564 1.0 ['ENSG00000197296|ENST00000396825|FITM2'] 138814 17429 YIWVKGRWKWK True PC9_epitope_Rep6 1548.87177374212 1548.8701349037901 79.655 3 -0.9200465541035437 0.2831069667797355 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 74303 11763 NELEIKKQKYF True H1975_Epitope_Rep1 1438.78201524786 1438.78090993586 50.238 2 -0.92010372878045 0.2831168117773078 1.0 ['HDX|p.Q622K|1|0.32|ENSG00000165259|chrX:84326261-84326261|G/T|missense_variant'] 136488 9454 WVRYRFREFFE True H1975_Epitope_Rep1 1633.8153810648098 1633.81372490379 41.282 3 -0.9201444783592149 0.28313650096127435 1.0 ['TSPAN14|p.D121Y|1|0.23|ENSG00000108219|chr10:80509382-80509382|G/T|missense_variant'] 43259 15642 IFQEKNTI True PC9_epitope_Rep1 991.53384606775 991.53274993586 64.988 2 -0.9201791468732652 0.28313650096127435 1.0 ['ENST00000482172.5_1_13:21237473-21265311:+|nuORF'] 83967 16846 PVSAPVPIS True PC9_epitope_Rep5 865.49091862661 865.49037496793 69.807 1 -0.9202152978409063 0.28314634514769094 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP'] 142835 10332 YYSQQMAQRVK True NCI_RA007_Epitope_Rep2 1400.6870693171998 1400.6859699358602 44.78 2 -0.9202372536849948 0.2831523007840929 1.0 ['ENSG00000183347|ENST00000370456|GBP6', 'GBP6|p.L464Tfs*13|1|0.05|ENSG00000183347|chr1:89383674-89383681|TCCTGGAG/-|frameshift_variant'] 25111 14592 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 64.737 2 -0.9202384763002177 0.2831523007840929 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 87457 8867 QQALERIWKE True H1975_Epitope_Rep3 1299.6935345966301 1299.6924299358602 39.109 2 -0.9203237314509428 0.2831896078215973 1.0 ['ENST00000585266.5_1_17:9939966-9940032:-|nuORF'] 14663 10605 DVFLMLKK True NCI_RA007_Epitope_Rep2 992.5728744287599 992.57176993586 45.85 2 -0.9203503731143703 0.2832406453827669 1.0 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 110188 22715 TEQELMEQLEH True PC9_epitope_Rep3 1385.61329524025 1385.6121899358602 92.642 2 -0.9203851782836582 0.28324659810235214 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 62229 12418 LLEWMIRWSNR True NCI_RA007_Epitope_Rep3 1502.7816384083796 1502.78054993586 56.059 2 -0.920390075000925 0.28324659810235214 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 15447 8287 EALGSRHR True H1975_Epitope_Rep3 924.488961564 924.48786993586 36.86 2 -0.9204493281042446 0.2832701708134234 1.0 ['nc|ENSG00000107242|O14986-3|PIP5K1B', 'ENSG00000107242|ENST00000265382|PIP5K1B', 'nc|ENSG00000107242|O14986-2|PIP5K1B'] 44240 20287 IKPKIQRPNTT True H1975_Epitope_Rep2 1294.7721192704996 1294.77046490379 84.07 3 -0.9205289876550776 0.28330358368804065 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 110833 13258 TGPRCEVQL True PC9_epitope_Rep2 1001.4964150132098 1001.49530993586 56.271 2 -0.9205295939868398 0.28330358368804065 1.0 ['STAB1|p.S2079Mfs*27|1|0.08|ENSG00000010327|chr3:52521915-52521933|AGCCTGGGCTATGAAGGGG/-|frameshift_variant', 'ENSG00000010327|ENST00000321725|STAB1', 'ENST00000462741.5_1_3:52555417-52555721:+|nuORF'] 25314 23530 FDRLIRRSKLW True PC9_epitope_Rep5 1488.8677509908398 1488.86664993586 95.493 2 -0.9205740687090208 0.28330953427065025 1.0 ['ENSG00000273604|ENST00000621654|EPOP'] 44019 19896 IIHSVGDEEG True PC9_epitope_Rep5 1054.49310345458 1054.49200993586 81.583 2 -0.9205838124937181 0.28330953427065025 1.0 ['ENST00000436137.2_1_11:124530361-124543691:-|nuORF'] 38515 14778 HERRKRHREEQ True PC9_epitope_Rep3 1559.81415227819 1559.81251490379 61.98 3 -0.920604393890389 0.28331548452645744 1.0 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000008128|Q9UQ88-9|CDK11A', 'ENST00000598846.1_1_1:1636463-1654047:-|nuORF'] 11636 5921 DGLGPAEAP True H1975_Epitope_Rep3 825.38684748089 825.3862949679301 27.784 1 -0.9206142606878214 0.28331548452645744 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1'] 36973 10296 GVMRMKWWLF True NCI_RA007_Epitope_Rep3 1352.6885899706797 1352.6874899358602 47.57 2 -0.9207200017594035 0.28339397267797073 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF'] 126258 23398 VLHGGSPC True NCI_RA007_Epitope_Rep4 768.35885891124 768.35776993586 101.57 2 -0.9207314530061338 0.28340381130210335 1.0 ['ENST00000569796.1_1_16:2281646-2281928:+|nuORF'] 23072 7300 EVIFPEDVSP True H1975_Epitope_Rep1 1130.54955570154 1130.5484499358602 33.09 2 -0.9207418491913333 0.28340608955879526 1.0 ['ENST00000475947.6_1_17:16343543-16344720:+|nuORF'] 95419 9918 RWFQMEMRNSL True H1975_Epitope_Rep1 1496.7016738355198 1496.7005699358601 43.085 2 -0.9207706355617723 0.28340608955879526 1.0 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|20|2|sense'] 67063 11841 LSQALPVDR True PC9_epitope_Rep5 997.5556441414899 997.55454993586 50.546 2 -0.9207767596642021 0.28340608955879526 1.0 ['ENST00000433948.5_2_12:50185624-50186122:-|nuORF'] 80549 8482 PGPLSKQGS True PC9_epitope_Rep3 869.46068112749 869.46013496793 37.587 1 -0.9207885340995864 0.28340608955879526 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 7026 5417 AQPLGGPG True NCI_RA007_Epitope_Rep5 695.3602388102299 695.3596949679301 27.526 1 -0.9208110047768882 0.28340608955879526 1.0 ['ENSG00000113722|ENST00000231656|CDX1'] 38296 5490 HEFLFHYFGSY True NCI_RA007_Epitope_Rep3 1445.6404363946099 1445.63878490379 28.598 3 -0.9208212653554468 0.28340608955879526 1.0 ['ARSF|p.C449F|1|0.45|ENSG00000062096|chrX:3110208-3110208|G/T|missense_variant'] 61278 17454 LIPLACYLV True H1975_Epitope_Rep1 1003.57762545603 1003.57707496793 72.622 1 -0.920821398028546 0.28340608955879526 1.0 ['FZD10|p.A560Sfs*13|1|0.26|ENSG00000111432|chr12:130164613-130164614|-/A|frameshift_variant', 'ENSG00000111432|ENST00000229030|FZD10', 'FZD10|p.D435Afs*24|1|0.13|ENSG00000111432|chr12:130164246-130164246|A/-|frameshift_variant'] 33657 22120 GLGPLLLNL True PC9_epitope_Rep4 908.56950330048 908.56840993586 93.301 2 -0.9208325430501282 0.28340608955879526 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 12240 11690 DIKEKDFKEKR True NCI_RA007_Epitope_Rep2 1434.7830778770197 1434.78198993586 50.065 2 -0.9208446371326218 0.28340608955879526 1.0 ['ENST00000508756.2_1_5:98204705-98207835:-|nuORF'] 140690 14198 YRWLWWQPWWW True NCI_RA007_Epitope_Rep1 1791.8462872702696 1791.8451899358602 59.263 2 -0.9208625396707236 0.28340608955879526 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 67012 20027 LSPNEYFSLV True PC9_epitope_Rep5 1167.5811901829902 1167.58008993586 82.085 2 -0.9209559759395506 0.28345710873474544 1.0 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 68541 12831 LTGIWQMRHLK True H1975_Epitope_Rep3 1381.7652600682502 1381.76416993586 54.574 2 -0.9210401499144723 0.28346305371384645 1.0 ['nc|ENSG00000158604|Q7Z7H5-2|TMED4', 'ENSG00000158604|ENST00000457408|TMED4'] 123900 17514 VGRRRTSR True NCI_RA007_Epitope_Rep4 986.5845932843399 986.58404496793 75.815 1 -0.921048515120658 0.28346305371384645 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 88475 23353 QSSVVRCRPLT True PC9_epitope_Rep1 1244.6659399497998 1244.66484993586 94.613 2 -0.9211543617928576 0.2835140700068634 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 91359 6124 RHAVPVAL True PC9_epitope_Rep4 861.5184707871299 861.51736993586 30.568 2 -0.9211851979533973 0.2835200131774008 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF', 'ENST00000487121.1_1_2:47136034-47168791:-|nuORF'] 116528 12855 TTSWCSYNRAH True PC9_epitope_Rep5 1324.56186880408 1324.56022490379 54.457 3 -0.9211931350976705 0.2835200131774008 1.0 ['ENST00000439557.6_1_16:77225118-77228327:+|nuORF'] 123436 10684 VGNLEKWFW True NCI_RA007_Epitope_Rep3 1177.59202965021 1177.5903749037902 49.07 3 -0.9212317511097956 0.2835298477756578 1.0 ['ENSG00000172461|ENST00000302103|FUT9'] 4287 9762 AIGRIYEEQRK True PC9_epitope_Rep4 1361.74154741821 1361.7404499358602 45.191 2 -0.921261546517349 0.2835671342685371 1.0 ['ENSG00000047621|ENST00000261250|C12orf4'] 25812 18217 FEYYSSSV True PC9_epitope_Rep5 980.4127278755599 980.41162993586 75.084 2 -0.921296648774128 0.2835906938439366 1.0 ['nc|ENSG00000266200|P54317|PNLIPRP2'] 14874 9299 DWKEIQTLLSH True H1975_Epitope_Rep1 1368.7037649271601 1368.70266993586 40.677 2 -0.9213580182360993 0.283592742046172 1.0 ['nc|ENSG00000087269|P78316-2|NOP14', 'ENSG00000087269|ENST00000416614|NOP14'] 105530 7029 SSAPLESPSP True H1975_Epitope_Rep3 970.46074069714 970.4596499358599 31.999 2 -0.9213992749725947 0.283592742046172 1.0 ['HOXD3|p.R77Efs*9|1|0.22|ENSG00000128652|chr2:176169340-176169341|-/T|frameshift_variant'] 25099 358 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 2.0417 2 -0.9214327067541442 0.283592742046172 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57720 9037 LEELGRKYK True H1975_Epitope_Rep1 1134.6397081186199 1134.6386099358601 39.668 2 -0.9214369773066008 0.2836025748363277 1.0 ['PDILT|p.Q435K|1|0.3|ENSG00000169340|chr16:20362517-20362517|G/T|missense_variant'] 118849 8486 VAASALLY True H1975_Epitope_Rep3 806.4538048418999 806.45270993586 37.627 2 -0.921494413589501 0.2836261323085369 1.0 ['ENSG00000165685|ENST00000543484|TMEM52B'] 77712 10794 NTLERREKHEK True H1975_Epitope_Rep1 1438.7640737679396 1438.7629699358602 46.482 2 -0.921514038572455 0.2836359643705137 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 40345 8407 HQRCMRTLWRR True NCI_RA007_Epitope_Rep1 1541.7932232349299 1541.7915749037902 36.704 3 -0.9215887776971439 0.2836419032979702 1.0 ['ENST00000549488.5_1_12:53693918-53699773:+|nuORF'] 58107 11269 LEKEYFSKNKK True NCI_RA007_Epitope_Rep1 1412.7663651837195 1412.76526993586 47.815 2 -0.9215948308311523 0.2836419032979702 1.0 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'nc|ENSG00000164989|Q6TFL3-3|CCDC171'] 16601 8855 EENKYSRYRML True H1975_Epitope_Rep1 1487.7190977214698 1487.7180099358602 38.984 2 -0.9216173923638931 0.2836654589371981 1.0 ['ENST00000366525.8_2_1:245025904-245026177:-|nuORF'] 133319 23250 VVTVIIII True PC9_epitope_Rep6 868.5997407995999 868.59864993586 102.53 2 -0.9216547003327972 0.2836713968105838 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 12121 10860 DIDCNPYNDK True H1975_Epitope_Rep3 1195.48155279471 1195.4804499358602 46.855 2 -0.9216551145399059 0.2836713968105838 1.0 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 102798 293 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 1.6616 2 -0.9217060601881951 0.2836812274417775 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 137934 6214 YFDYREEFIYW True PC9_epitope_Rep3 1629.7139952576897 1629.7123349037902 28.942 3 -0.921870527395034 0.2836910578031509 1.0 ['LRP1B|p.D3049Y|1|0.22|ENSG00000168702|chr2:140487715-140487715|C/A|missense_variant'] 97821 9989 SELLIHWEN True H1975_Epitope_Rep1 1139.5611234447501 1139.56002993586 43.357 2 -0.9218856557410097 0.28370088789471515 1.0 ['ENST00000485671.1_1_X:104993011-105009296:+|nuORF'] 53556 23561 KRPVGGGG True NCI_RA007_Epitope_Rep4 726.4136713654198 726.41312496793 102.23 1 -0.9218935724867473 0.28370682438830264 1.0 ['ENST00000249014.4_2_22:37965065-37965389:+|nuORF'] 125100 5997 VIEQMKEQHHR True H1975_Epitope_Rep1 1433.71976642781 1433.7186699358601 28.138 2 -0.9219384985670119 0.28370682438830264 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 25254 14994 FDLEKDLHII True NCI_RA007_Epitope_Rep1 1241.66558851329 1241.66448993586 62.388 2 -0.9220142386726805 0.28374409924250743 1.0 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant', 'MYCBP2|p.K641Gfs*11|1|0.09|ENSG00000005810|chr13:77257813-77257814|-/TTTTTCTTTTTGTTCCT|frameshift_variant'] 45186 13862 IPQREKTV True PC9_epitope_Rep5 969.5607295219299 969.55962993586 58.341 2 -0.9220630181333341 0.28375392806663646 1.0 ['ENST00000475200.5_1_10:103113883-103221786:+|nuORF'] 110019 6952 TEKETSLEETK True NCI_RA007_Epitope_Rep1 1293.6299908502099 1293.6288899358601 31.046 2 -0.9220812848611847 0.2837735849056604 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant'] 25083 17302 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 72.038 2 -0.9220820049446123 0.2837735849056604 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 122977 8386 VGHSWPGP True NCI_RA007_Epitope_Rep5 835.3976869481098 835.39658993586 38.931 2 -0.9221620709901999 0.2838108567978484 1.0 ['ENST00000273814.7_1_4:953005-953860:-|nuORF'] 44994 8547 IPAVAPQFI True NCI_RA007_Epitope_Rep4 954.5538532363399 954.55274993586 39.67 2 -0.9221929142738086 0.28382068416647227 1.0 ['NEB|p.D789V|1|0.28|ENSG00000183091|chr2:151688341-151688341|T/A|missense_variant'] 17344 6165 EHCFHMCDTM True H1975_Epitope_Rep2 1252.4133562891998 1252.41224993586 28.686 2 -0.9222320664537753 0.2838579543895277 1.0 ['MMD|p.R101T|1|0.08|ENSG00000108960|chr17:55407788-55407788|C/G|missense_variant'] 126963 9263 VLRMAVTRQFP True NCI_RA007_Epitope_Rep2 1316.73871096724 1316.73760993586 40.641 2 -0.9222532498048029 0.2838677808422179 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR', 'nc|ENSG00000001626|P13569-3|CFTR'] 31272 10618 GDGAEQARRP True H1975_Epitope_Rep1 1055.5108192073899 1055.5097299358602 45.799 2 -0.9222869149381729 0.283871852918982 1.0 ['ENST00000606529.5_1_1:205313392-205325703:-|nuORF', 'ENST00000606111.1_1_1:205313392-205326121:-|nuORF'] 124562 21973 VGVRARTK True PC9_epitope_Rep5 885.55083354457 885.54972993586 89.551 2 -0.9223010076612118 0.283871852918982 1.0 ['nc|ENSG00000169598|O76075-3|DFFB'] 27035 17747 FLFAPLLP True PC9_epitope_Rep3 916.5422259234799 916.54112993586 73.46 2 -0.9223021929821499 0.283871852918982 1.0 ['ENST00000512091.6_2_4:62067041-62067179:+|nuORF'] 97893 3960 SELVKKQELRF True NCI_RA007_Epitope_Rep5 1375.7823496010299 1375.78069490379 21.585 3 -0.9223179925124708 0.283871852918982 1.0 ['ENSG00000261739|ENST00000562295|GOLGA8S', 'ENSG00000178115|ENST00000562783|GOLGA8Q'] 18767 11250 ELCWEYYDY True H1975_Epitope_Rep2 1282.48524119282 1282.4841499358602 48.317 2 -0.9223555792427968 0.283871852918982 1.0 ['ENSG00000196620|ENST00000338206|UGT2B15', 'UGT2B15|p.N125K|1|0.17|ENSG00000196620|chr4:68670244-68670244|G/T|missense_variant'] 48816 8348 KDRGDLNRII True NCI_RA007_Epitope_Rep4 1198.67821888566 1198.6765649037902 38.925 3 -0.9223711643043624 0.283871852918982 1.0 ['TCERG1L|p.M585*|1|0.24|ENSG00000176769|chr10:131093170-131093170|T/-|frameshift_variant', 'ENSG00000176769|ENST00000368642|TCERG1L', 'TCERG1L|p.H388Tfs*27|1|0.08|ENSG00000176769|chr10:131146533-131146533|G/-|frameshift_variant', 'ENST00000483040.1_1_10:132891427-132954311:-|nuORF'] 129235 8610 VQTRRQHSL True H1975_Epitope_Rep3 1123.62103836271 1123.6199499358602 38.11 2 -0.9224663163928654 0.2838816782372472 1.0 ['ENST00000398117.1_1_18:60792389-60792626:-|nuORF'] 59867 14444 LGGACGAGGY True H1975_Epitope_Rep1 824.34868815036 824.34813496793 60.755 1 -0.9225256197601881 0.28389150328590834 1.0 ['CON__Q922U2'] 117892 21597 TWICAICKNV True PC9_epitope_Rep1 1149.56747177849 1149.5663699358602 87.896 2 -0.9225453998344678 0.2839013280649764 1.0 ['ENST00000367066.7_1_6:159456639-159456687:-|nuORF'] 123228 19164 VGLGALGVI True PC9_epitope_Rep4 797.50108938749 797.5005449679301 81.812 1 -0.9226292879769782 0.28392097681437783 1.0 ['ENST00000427497.3_1_17:17135133-17140372:-|nuORF'] 63105 16033 LLQTKMVF True PC9_epitope_Rep2 978.55722436462 978.55612993586 66.927 2 -0.9226416077992807 0.28392097681437783 1.0 ['ENST00000467675.5_1_10:126095965-126097319:-|nuORF'] 24972 14638 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 61.516 2 -0.9226756869785802 0.2839543434121714 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 129822 19765 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 88.685 2 -0.9227071033263735 0.2839543434121714 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 6250 5252 APQRLPQT True PC9_epitope_Rep1 909.5032146458099 909.50210993586 25.048 2 -0.9227635889174732 0.28400142672922324 1.0 ['nc|ENSG00000120341|Q96JE7-2|SEC16B', 'ENSG00000120341|ENST00000308284|SEC16B', 'ENST00000464428.2_1_1:177930716-177937161:-|nuORF', 'ENST00000466953.6_1_1:177929778-177937161:-|nuORF'] 109549 14634 TDSLFLHYLQE True NCI_RA007_Epitope_Rep1 1364.66123140884 1364.6601299358601 60.975 2 -0.9227665274192193 0.28400142672922324 1.0 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-6|RPGRIP1'] 45156 14044 IPPAKIIIPKF True PC9_epitope_Rep5 1235.80056586447 1235.79892490379 59.035 3 -0.922855476973575 0.28400159119902335 1.0 ['ENSG00000214866|ENST00000399143|DCDC2C'] 62695 20941 LLLLLPPRV True PC9_epitope_Rep4 1032.70593720364 1032.70484993586 88.709 2 -0.9228705297077403 0.28400159119902335 1.0 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2'] 10205 7621 CASAAAPV True H1975_Epitope_Rep1 688.3214107733601 688.3208649679301 34.303 1 -0.9228823586316687 0.28400159119902335 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 89349 17145 QWRRRPALR True NCI_RA007_Epitope_Rep4 1237.7268408439297 1237.7257499358602 74.266 2 -0.9229077338501199 0.28400159119902335 1.0 ['ENST00000240139.9_1_8:22298692-22298875:+|nuORF'] 13583 15978 DPERRWFGD True H1975_Epitope_Rep2 1176.5312202987998 1176.53012993586 66.659 2 -0.9229439082362505 0.28400159119902335 1.0 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF'] 69094 15623 LTRDRRHEVA True H1975_Epitope_Rep1 1251.67961586799 1251.6785099358601 65.379 2 -0.9229750702008989 0.28400159119902335 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 14882 17452 DWQRQLRYYWD True NCI_RA007_Epitope_Rep1 1627.75317473107 1627.7520699358602 72.019 2 -0.9229886981383346 0.28400159119902335 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 30886 8771 GAPRFLLTFDF True NCI_RA007_Epitope_Rep4 1282.6710082468996 1282.66990993586 40.54 2 -0.9230880469535063 0.28404866740737694 1.0 ['ENSG00000173868|ENST00000310544|PHOSPHO1', 'nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1', 'nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1'] 3600 10536 AGNREDQINR True PC9_epitope_Rep3 1171.5693967126697 1171.56828993586 45.467 2 -0.9230931418863639 0.28404866740737694 1.0 ['ENSG00000147604|ENST00000352983|RPL7'] 100510 8839 SLASLHFLWQT True NCI_RA007_Epitope_Rep5 1301.67682190333 1301.67572993586 40.663 2 -0.9231496541182491 0.2840782850794783 1.0 ['ENSG00000229474|ENST00000682850|PATL2'] 44383 22255 ILEVMNPPPKK True PC9_epitope_Rep5 1264.7213295676 1264.72022993586 90.611 2 -0.9231506872044316 0.2840782850794783 1.0 ['ENST00000602599.1_1_2:61194615-61239025:-|nuORF', 'ENSG00000162927|ENST00000316752|PUS10'] 130170 14978 VSEEHNLLP True PC9_epitope_Rep4 1036.5189242795998 1036.5178299358602 65.551 2 -0.9232015854275774 0.2840782850794783 1.0 ['ENST00000461116.1_1_7:44157158-44161472:-|nuORF', 'ENST00000470867.5_1_7:44156819-44163110:-|nuORF', 'ENST00000463464.5_1_7:44156730-44161694:-|nuORF', 'ENSG00000106628|ENST00000610533|POLD2'] 79170 16717 PANLFEDMDL True PC9_epitope_Rep5 1163.51687567427 1163.51521490379 69.309 3 -0.9232018807455694 0.2840782850794783 1.0 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 29157 9715 FTPTFSQH True H1975_Epitope_Rep1 963.4450310633499 963.44392993586 42.296 2 -0.9232021440726834 0.2840782850794783 1.0 ['ENST00000503574.1_1_4:109542025-109542112:+|nuORF'] 25162 24173 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 97.794 2 -0.9232253204662694 0.2840782850794783 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 65464 18254 LRKKHLKA True NCI_RA007_Epitope_Rep2 992.6607183467199 992.65962993586 75.761 2 -0.9232539858678277 0.2840782850794783 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1'] 100099 15394 SISGGSAVVL True PC9_epitope_Rep6 888.4916469026 888.49054993586 71.362 2 -0.9232584773498181 0.2840782850794783 1.0 ['ENSG00000161509|ENST00000293190|GRIN2C'] 137485 4660 YEEEQVER True NCI_RA007_Epitope_Rep3 1080.4723680099999 1080.4712699358602 25.256 2 -0.9232785269719109 0.2840782850794783 1.0 ['ENST00000546687.1_1_12:113321187-113328809:+|nuORF', 'ENST00000549913.6_1_12:113307544-113334582:+|nuORF', 'nc|ENSG00000089169|Q9Y2J0-2|RPH3A', 'ENSG00000089169|ENST00000389385|RPH3A'] 45846 13343 ISDNYQLWLGR True NCI_RA007_Epitope_Rep1 1363.6884492161898 1363.68734993586 55.905 2 -0.92328030589894 0.2840782850794783 1.0 ['ENST00000593859.5_1_19:51323389-51327022:-|nuORF', 'ENSG00000167748|ENST00000301420|KLK1'] 119069 7853 VAGKVVKG True H1975_Epitope_Rep3 756.4857736765199 756.48466993586 35.182 2 -0.9233256079897848 0.2841018185807938 1.0 ['nc|ENSG00000155090|Q13118-4|KLF10'] 81318 11459 PLAIVDQR True PC9_epitope_Rep5 910.5236157372199 910.52250993586 49.076 2 -0.9233460370998746 0.28410774041362663 1.0 ['ENSG00000152661|ENST00000282561|GJA1'] 25143 1966 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 11.167 2 -0.9233628396347038 0.28410774041362663 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 70551 13956 LVYRKGIDLL True NCI_RA007_Epitope_Rep4 1188.7230438197598 1188.72194993586 60.959 2 -0.9233812041646444 0.2841312725427541 1.0 ['ENSG00000165195|ENST00000333590|PIGA'] 963 10656 ADSIERRHKKN True NCI_RA007_Epitope_Rep1 1352.7272943363998 1352.72618993586 45.44 2 -0.9234514491528619 0.28418223209632737 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 34330 4237 GPATWGSRTS True NCI_RA007_Epitope_Rep2 1018.4832074772199 1018.48210993586 21.12 2 -0.9234852736974883 0.2841881513987932 1.0 ['nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000311117.7_1_7:104753635-104753803:+|nuORF', 'KMT2E|p.N1645Ffs*223|1|0.08|ENSG00000005483|chr7:105112688-105112689|GA/-|frameshift_variant'] 82866 2851 PRSSSLWIELC True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 15.639 3 -0.9235343130649787 0.2841881513987932 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 128459 13500 VPSERSLSL True PC9_epitope_Rep6 986.53965972418 986.53856993586 63.638 2 -0.9235411555320375 0.28419407037656674 1.0 ['ENSG00000065989|ENST00000380702|PDE4A'] 133318 24450 VVTVIIII True PC9_epitope_Rep4 868.5997407995999 868.59864993586 102.53 2 -0.923555869376281 0.28419407037656674 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 36590 5578 GVHQGGNLL True PC9_epitope_Rep4 893.47191451753 893.47080993586 28.232 2 -0.9235937477101626 0.28423131248028743 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P', 'ENSG00000198445|ENST00000359963|CCT8L2'] 44540 4925 ILMLNMGGP True PC9_epitope_Rep1 944.4823451721999 944.48124993586 23.808 2 -0.9236077258232096 0.28424112774943777 1.0 ['ENST00000592111.1_1_18:55240476-55253852:-|nuORF', 'ENST00000585878.1_1_18:55240476-55253852:-|nuORF', 'ENSG00000066926|ENST00000262093|FECH', 'nc|ENSG00000066926|P22830-2|FECH'] 125292 14533 VIMLGAGGVGK True PC9_epitope_Rep1 1000.5739370579198 1000.57282993586 60.726 2 -0.9236146301690192 0.284247044949675 1.0 ['RIT2|p.V24I|1|0.21|ENSG00000152214|chr18:43115450-43115450|C/T|missense_variant'] 113327 8425 TLRNEHLQ True PC9_epitope_Rep3 1009.53049202281 1009.52938993586 37.371 2 -0.9236357838282352 0.284247044949675 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 97660 8031 SEGRGGRL True PC9_epitope_Rep4 830.43586336198 830.43476993586 38.342 2 -0.9236746530025246 0.28426479460319204 1.0 ['ENST00000300051.8_2_16:75149460-75150658:-|nuORF'] 55239 9196 LADGNVKAFY True NCI_RA007_Epitope_Rep5 1096.5553097883198 1096.5542099358602 42.023 2 -0.9237502477787197 0.28426479460319204 1.0 ['ENSG00000104450|ENST00000388798|SPAG1'] 135488 18217 WIMLILVG True NCI_RA007_Epitope_Rep3 943.5564960886298 943.55538993586 79.773 2 -0.9237666742691981 0.28426479460319204 1.0 ['ENST00000489322.5_1_22:24226412-24227033:+|nuORF', 'ENST00000461809.5_1_22:24225898-24227033:+|nuORF', 'nc|ENSG00000133460|Q9BYW1|SLC2A11', 'ENSG00000133460|ENST00000316185|SLC2A11', 'nc|ENSG00000133460|Q9BYW1-4|SLC2A11'] 31037 6569 GASWKREEWP True NCI_RA007_Epitope_Rep2 1244.5938205553598 1244.59272993586 30.164 2 -0.9237720695929269 0.28426479460319204 1.0 ['ENST00000320330.7_1_16:29827508-29827685:+|nuORF'] 70113 10519 LVPELQAT True PC9_epitope_Rep1 869.4858332461699 869.48472993586 45.352 2 -0.9237932023720823 0.28426479460319204 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 102071 11744 SLRDQLLV True PC9_epitope_Rep4 942.5498304850599 942.54872993586 52.933 2 -0.9237965474294472 0.28426479460319204 1.0 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 70180 4235 LVQAEYWHDP True NCI_RA007_Epitope_Rep4 1256.5825871653199 1256.5814899358602 22.605 2 -0.9238532042006913 0.28429423459244535 1.0 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 87545 17954 QQKVEILTA True PC9_epitope_Rep2 1028.5866099165999 1028.58607496793 74.366 1 -0.9238608257241172 0.28429423459244535 1.0 ['ENSG00000162441|ENST00000377223|LZIC', 'nc|ENSG00000162441|Q8WZA0-2|LZIC'] 45187 6213 IPQRRSRNPEN True NCI_RA007_Epitope_Rep5 1365.72254330913 1365.72088490379 30.575 3 -0.9238629736029351 0.28429423459244535 1.0 ['POTEC|p.K454N|1|0.29|ENSG00000183206|chr18:14522301-14522301|T/A|missense_variant'] 113667 12004 TLWNIYACGF True H1975_Epitope_Rep1 1186.5481162328997 1186.5470099358602 51.181 2 -0.92390062520396 0.28431775803444115 1.0 ['nc|ENSG00000293032|Q6UXP3|TMEM14EP'] 25170 26709 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 109.42 2 -0.9239240321050983 0.28432757036894857 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 135234 19335 WFHFKRYRYRR True PC9_epitope_Rep4 1713.9116814914898 1713.91003490379 82.479 3 -0.9240526910196631 0.28433160138738467 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 49163 18825 KELEPQLTILY True H1975_Epitope_Rep3 1345.74931813725 1345.74822993586 78.956 2 -0.924120203185854 0.28433160138738467 1.0 ['ENST00000434942.1_1_22:32664397-32665363:+|nuORF'] 80419 22421 PGKKLRKDPC True PC9_epitope_Rep4 1140.6437479532399 1140.6426499358602 94.474 2 -0.9241373752048483 0.28433160138738467 1.0 ['ENST00000467133.5_1_2:239102950-239112145:-|nuORF', 'ENST00000463129.5_1_2:239103388-239112145:-|nuORF'] 14939 18472 DYEQRERFLLF True PC9_epitope_Rep3 1514.7517777487399 1514.75014490379 76.258 3 -0.9241491778588806 0.28433160138738467 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'ENST00000555235.1_1_14:103966361-103969561:+|nuORF', 'APOPT1-MARK3|5|fusion', 'APOPT1-MARK3|2|fusion', 'APOPT1-MARK3|4|fusion', 'APOPT1-MARK3|1|fusion', 'APOPT1-MARK3|3|fusion'] 116824 7023 TVEHIVYKALR True H1975_Epitope_Rep1 1327.7612202336297 1327.75957490379 32.049 3 -0.9241554052850292 0.28433160138738467 1.0 ['ENSG00000076242|ENST00000231790|MLH1', 'nc|ENSG00000076242|P40692-2|MLH1', 'nc|ENSG00000076242|P40692-3|MLH1'] 65168 9789 LQPSLPHTGA True PC9_epitope_Rep2 1019.53999407735 1019.53888993586 42.99 2 -0.9241670665084581 0.28433160138738467 1.0 ['ENST00000397420.7_1_11:838599-838812:+|nuORF'] 60863 5952 LHWFKEEFFHW True H1975_Epitope_Rep1 1604.75646920636 1604.75482490379 27.965 3 -0.9242262820944984 0.28437084458579515 1.0 ['ENST00000493324.5_1_3:25778798-25824881:-|nuORF', 'NGLY1|p.K419Nfs*19|1|0.26|ENSG00000151092|chr3:25733875-25733875|C/-|frameshift_variant', 'nc|ENSG00000151092|Q96IV0-3|NGLY1', 'nc|ENSG00000151092|Q96IV0-5|NGLY1', 'nc|ENSG00000151092|Q96IV0-2|NGLY1', 'ENSG00000151092|ENST00000280700|NGLY1'] 97801 14005 SELEGVSLVTG True PC9_epitope_Rep2 1089.55536935797 1089.55426993586 59.142 2 -0.9242315428009168 0.28437084458579515 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2'] 66862 8066 LSNFGDSV True PC9_epitope_Rep3 837.38684748089 837.38574993586 36.002 2 -0.9242326242129539 0.28437084458579515 1.0 ['SYNE1|p.C1234S|1|0.12|ENSG00000131018|chr6:152444547-152444547|C/G|missense_variant'] 89348 17056 QWRRRPALR True NCI_RA007_Epitope_Rep4 1237.7268408439297 1237.7257499358602 73.901 2 -0.9242717277766838 0.28437084458579515 1.0 ['ENST00000240139.9_1_8:22298692-22298875:+|nuORF'] 66462 11478 LSGSSFNWPY True H1975_Epitope_Rep1 1156.5189242796 1156.5178299358602 49.134 2 -0.9242975417265646 0.2843806547129462 1.0 ['ENST00000506162.1_1_5:92927828-92929545:+|nuORF', 'nc|ENSG00000185551|P24468-3|NR2F2', 'nc|ENSG00000185551|P24468-2|NR2F2', 'ENSG00000185551|ENST00000394166|NR2F2', 'ENSG00000175745|ENST00000327111|NR2F1'] 62259 21102 LLFKLFKV True PC9_epitope_Rep2 1006.6579243820598 1006.65682993586 86.627 2 -0.9243496074024405 0.28438078267425126 1.0 ['ENST00000361830.7_2_20:57253146-57253287:+|nuORF'] 57441 12814 LEAVMEGA True PC9_epitope_Rep3 818.3844049527399 818.38330993586 54.311 2 -0.9243694748518396 0.28438078267425126 1.0 ['ENST00000368194.7_1_1:156905230-156905260:-|nuORF'] 62859 14989 LLMLWFYAKIY True NCI_RA007_Epitope_Rep5 1459.79376623187 1459.7926699358602 64.325 2 -0.9243885119879421 0.28438078267425126 1.0 ['ENSG00000196639|ENST00000431010|HRH1'] 121163 19376 VESCDCHP True PC9_epitope_Rep3 888.31058838948 888.30948993586 79.753 2 -0.9244037769358316 0.28438078267425126 1.0 ['ENST00000439875.1_1_9:115871246-115871747:-|nuORF'] 116686 12836 TVCQRCWLL True PC9_epitope_Rep6 1120.55215606752 1120.5510499358602 60.884 2 -0.9244097320021428 0.28438078267425126 1.0 ['ENSG00000084092|ENST00000264230|NOA1'] 132789 18802 VVKASTRSQTS True NCI_RA007_Epitope_Rep5 1162.6305999868998 1162.6295099358601 79.162 2 -0.9244176858492587 0.28438078267425126 1.0 ['ENST00000412638.2_1_1:227884598-227884916:-|nuORF'] 32849 22961 GHNPRRRR True NCI_RA007_Epitope_Rep5 1047.59107564711 1047.5899699358602 95.546 2 -0.9244239135316795 0.28438078267425126 1.0 ['ENSG00000273820|ENST00000621775|USP27X'] 25017 9218 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 39.858 2 -0.9244336738497687 0.28439650209709694 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 109370 20741 TCRKELHLQST True NCI_RA007_Epitope_Rep5 1314.6714192530599 1314.66976490379 86.753 3 -0.9244369878898521 0.28439650209709694 1.0 ['ENSG00000185053|ENST00000382080|SGCZ', 'nc|ENSG00000185053|Q96LD1|SGCZ'] 100227 3442 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 19.311 2 -0.9244486061380425 0.28439650209709694 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 105851 10917 SSLRFLQAP True PC9_epitope_Rep6 1017.5607295219298 1017.55962993586 52.859 2 -0.9245046103197816 0.2844200167217204 1.0 ['ENSG00000120709|ENST00000239906|FAM53C'] 25069 27026 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 112.16 2 -0.9245589427768246 0.28443384590083054 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57053 11261 LDSDELHV True PC9_epitope_Rep4 926.4345259493001 926.43342993586 51.09 2 -0.9245664708294307 0.28443384590083054 1.0 ['ENSG00000185271|ENST00000636854|KLHL33', 'nc|ENSG00000185271|A6NCF5|KLHL33'] 124549 16933 VGVPTRAR True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50808496793 70.603 1 -0.9245770879270389 0.28443384590083054 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 61189 4058 LILFKNWRHR True PC9_epitope_Rep5 1381.80950783873 1381.80787490379 20.682 3 -0.9246135474968722 0.28443384590083054 1.0 ['ENST00000274071.6_1_4:157892226-157892268:-|nuORF'] 79504 10285 PCCSFPRT True PC9_epitope_Rep3 909.38369376009 909.38258993586 44.508 2 -0.9246187666665896 0.28443384590083054 1.0 ['ENST00000281830.3_1_2:223919256-223919388:+|nuORF'] 12514 5201 DKIYYFFREDN True NCI_RA007_Epitope_Rep1 1508.6935941662798 1508.69194490379 24.314 3 -0.9246196704816304 0.28443384590083054 1.0 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 4363 9442 AILMKLRS True H1975_Epitope_Rep1 930.5684577546599 930.56736993586 41.233 2 -0.9246238532784118 0.28443384590083054 1.0 ['ENST00000326965.6_1_6:159462524-159465214:-|nuORF'] 65791 15773 LSDIFRVVP True PC9_epitope_Rep6 1044.59678067748 1044.59568993586 72.914 2 -0.924693888574376 0.28444365261008403 1.0 ['nc|ENSG00000151892|P56159-2|GFRA1', 'ENSG00000151892|ENST00000355422|GFRA1'] 42106 10018 IDLPPSKNRRE True H1975_Epitope_Rep3 1323.72589735407 1323.72480993586 43.572 2 -0.9247069088264404 0.2844534590505427 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000475602.1_1_X:123227886-123229311:+|nuORF'] 47135 9396 ITVIFLFFWLF True NCI_RA007_Epitope_Rep4 1444.8158815754398 1444.81478993586 42.997 2 -0.9247578040377209 0.2844906741218874 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 16109 9290 EEAIHQSQLRL True H1975_Epitope_Rep1 1322.69426287262 1322.6931699358602 40.646 2 -0.9248436865518542 0.2845239889819243 1.0 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 62820 15459 LLLWEIFTVR True PC9_epitope_Rep3 1288.7543439480398 1288.7532499358601 64.616 2 -0.9248574916261229 0.2845239889819243 1.0 ['ENST00000517914.1_1_8:25314857-25314992:-|nuORF'] 106537 5187 STLSNLSQAK True NCI_RA007_Epitope_Rep5 1047.55603806431 1047.5549499358601 26.646 2 -0.92498071493362 0.2845435983171858 1.0 ['ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 139610 17339 YLYKLRTKWML True PC9_epitope_Rep5 1513.8479270630498 1513.8468299358601 71.694 2 -0.9250253586196217 0.2845435983171858 1.0 ['ENSG00000203909|ENST00000370370|DPPA5'] 19461 4159 ELNKPPLGP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 21.096 2 -0.9251876119926393 0.28461801986981844 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 21452 8803 ERKHFRSGRIA True H1975_Epitope_Rep1 1355.7534495145899 1355.7523499358601 38.786 2 -0.9252126563033062 0.28461801986981844 1.0 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant', 'MACC1|p.D299Ifs*7|1|0.2|ENSG00000183742|chr7:20159466-20159466|C/-|frameshift_variant'] 123563 10839 VGPRKPFFER True NCI_RA007_Epitope_Rep4 1231.6825759901096 1231.68094490379 48.543 3 -0.9252299275516472 0.28462782284586713 1.0 ['ENSG00000251692|ENST00000447419|PTX4'] 123212 18766 VGLEWELE True PC9_epitope_Rep4 973.4756624852898 973.47456993586 80.266 2 -0.9252708746811751 0.2846376255532565 1.0 ['nc|ENSG00000142606|Q495T6-2|MMEL1', 'ENSG00000142606|ENST00000378412|MMEL1'] 30359 7859 GADAGEQRGP True H1975_Epitope_Rep3 956.4311719043599 956.43006993586 35.205 2 -0.9252980742130714 0.2846436302852602 1.0 ['ENST00000366847.8_1_6:167412887-167413552:+|nuORF'] 135957 22329 WQFIISWIL True PC9_epitope_Rep4 1204.6644663144798 1204.6633699358601 94.126 2 -0.9253115136422627 0.2846436302852602 1.0 ['VAC14|p.R192W|1|0.07|ENSG00000103043|chr16:70784133-70784133|G/A|missense_variant'] 108417 19069 SYLPFTEAF True NCI_RA007_Epitope_Rep2 1073.5069626135698 1073.50637496793 79.025 1 -0.9253677557251799 0.2846436302852602 1.0 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 18937 13550 ELEFVKRIIHD True H1975_Epitope_Rep1 1397.76669953689 1397.76560993586 57.244 2 -0.9253709878964937 0.2846436302852602 1.0 ['ENSG00000127804|ENST00000263092|METTL16', 'ENST00000574752.5_1_17:2340122-2367575:-|nuORF'] 11446 5516 DEYKGNLK True NCI_RA007_Epitope_Rep2 965.4818104948899 965.48070993586 26.072 2 -0.9253843191941445 0.2846436302852602 1.0 ['nc|ENSG00000121897|O43766-2|LIAS', 'nc|ENSG00000121897|O43766-3|LIAS', 'ENSG00000121897|ENST00000640888|LIAS'] 24974 15768 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 65.957 2 -0.9254072740305516 0.2846436302852602 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 33787 11065 GLLESEYSKLP True H1975_Epitope_Rep3 1234.64451871554 1234.64342993586 47.654 2 -0.9254116597365452 0.2846436302852602 1.0 ['KRT35|p.D405Y|1|0.3|ENSG00000197079|chr17:41477525-41477525|C/A|missense_variant'] 82119 8357 PNDTRKLYL True H1975_Epitope_Rep1 1118.6084079903399 1118.60730993586 37.075 2 -0.9254290305712647 0.2846436302852602 1.0 ['ENSG00000204913|ENST00000377924|LRRC3C'] 65544 21574 LRRLQRQQQVS True NCI_RA007_Epitope_Rep5 1410.8167780471401 1410.81514490379 90.071 3 -0.9254903105515386 0.2846436302852602 1.0 ['ENSG00000135973|ENST00000258456|GPR45'] 60063 12241 LGLGLGGR True NCI_RA007_Epitope_Rep2 741.44972252097 741.44917496793 52.215 1 -0.925529292456357 0.2846769331944977 1.0 ['ENST00000586064.3_1_19:19368617-19368821:-|nuORF', 'nc|ENSG00000120458|Q6P1R3-3|MSANTD2', 'ENSG00000120458|ENST00000374979|MSANTD2'] 46957 16458 ITPEPFYHV True PC9_epitope_Rep4 1101.54949613189 1101.54838993586 71.275 2 -0.9255334303113404 0.2846769331944977 1.0 ['MARS2|p.H239Y|1|0.17|ENSG00000247626|chr2:197706120-197706120|C/T|missense_variant'] 65198 9728 LQRKRPFSFWK True NCI_RA007_Epitope_Rep2 1491.8462872702696 1491.8451899358602 42.461 2 -0.925594130525775 0.28472783570127 1.0 ['ENST00000335503.3_1_7:56123338-56123398:+|nuORF'] 102645 9421 SLWTELC[Carbamidomethyl]DWLR True H1975_Epitope_Rep1 1477.7023853076 1477.7012899358601 41.15 2 -0.9256156930335747 0.28473763529250584 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 94418 17595 RRRRPAPL True NCI_RA007_Epitope_Rep5 1020.6417142376398 1020.64060993586 74.459 2 -0.9256289282945361 0.28474743461522656 1.0 ['ENST00000298307.9_1_14:50234918-50235191:+|nuORF'] 71596 4183 MDHENMFWYR True NCI_RA007_Epitope_Rep1 1427.57507634007 1427.57344490379 20.36 3 -0.9256494195031403 0.2847572336694432 1.0 ['nc|ENSG00000211753|A0A5B6|TRBV28'] 12729 10662 DLEEKELPWRR True H1975_Epitope_Rep1 1469.7626767856098 1469.76156993586 45.968 2 -0.9258021118208364 0.28476703245516694 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 128416 20002 VPRPVVLAL True PC9_epitope_Rep5 962.6276868829399 962.62658993586 81.991 2 -0.9258122844028974 0.2847769208640977 1.0 ['ENST00000455809.5_1_3:11888137-11888176:-|nuORF'] 60244 11833 LGQRVWDWWHR True PC9_epitope_Rep6 1537.76909957873 1537.7680099358602 56.721 2 -0.9258160116369811 0.2847769208640977 1.0 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 36366 6980 GVFEEIVP True PC9_epitope_Rep2 888.4592841451598 888.45818993586 32.245 2 -0.9258163598479591 0.2847769208640977 1.0 ['ENST00000375163.5_1_9:100372568-100388015:-|nuORF', 'ENSG00000136925|ENST00000341170|TSTD2'] 38545 18298 HESWKYNMSF True PC9_epitope_Rep5 1327.56555720219 1327.56444993586 75.399 2 -0.9258483518305837 0.2847769208640977 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 117426 17567 TVPYHCVTP True PC9_epitope_Rep1 1015.47970231991 1015.47860993586 72.364 2 -0.925859671268487 0.2847769208640977 1.0 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA'] 15464 8420 EALNNKNIKP True NCI_RA007_Epitope_Rep2 1139.6298717109098 1139.6287699358602 37.393 2 -0.92587904321963 0.2847769208640977 1.0 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 125312 25488 VINYLLRLK True PC9_epitope_Rep1 1130.7175645165 1130.71697496793 103.03 1 -0.9258812636407637 0.2847769208640977 1.0 ['ENST00000333957.8_1_12:22602475-22602664:-|nuORF'] 106117 5814 STDHVRQWLEW True H1975_Epitope_Rep3 1455.68951184535 1455.6884099358601 27.387 2 -0.9258880559009833 0.2847769208640977 1.0 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENST00000492833.5_1_21:39767491-39817511:-|nuORF', 'nc|ENSG00000157554|P11308-5|ERG', 'nc|ENSG00000157554|P11308-6|ERG', 'ENST00000468474.5_1_21:39772286-39947633:-|nuORF'] 5799 13198 APEAPRSPPA True PC9_epitope_Rep3 991.5086939490699 991.50758993586 55.803 2 -0.9259367862875969 0.2848200098624733 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'ENST00000464951.1_1_1:113257596-113257911:-|nuORF', 'ENST00000486709.1_1_1:113257111-113257923:-|nuORF'] 79953 20535 PESSLYKYP True PC9_epitope_Rep1 1082.5284263341398 1082.52732993586 83.801 2 -0.9259720892319239 0.2848200098624733 1.0 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG'] 47101 9963 ITTQLCGRTL True PC9_epitope_Rep2 1104.59612905448 1104.59502993586 43.653 2 -0.9259723101131645 0.2848200098624733 1.0 ['CYP4F2|p.I419Sfs*60|1|0.33|ENSG00000186115|chr19:15879664-15879664|A/-|frameshift_variant'] 138881 17833 YKFTKESRH True PC9_epitope_Rep3 1194.61455599994 1194.6129149037902 73.792 3 -0.9260565344100737 0.2848708992534758 1.0 ['nc|ENSG00000163075|Q4G0U5-2|CFAP221', 'ENSG00000163075|ENST00000413369|CFAP221'] 138003 11637 YFSSHWREKWK True H1975_Epitope_Rep1 1552.75753183552 1552.75642993586 49.752 2 -0.9260865405795804 0.28487679263632254 1.0 ['ENST00000216500.9_1_14:60611635-60611674:-|nuORF'] 835 23875 ADAARTREFL True H1975_Epitope_Rep1 1148.59382055536 1148.59272993586 99.097 2 -0.9261001364819229 0.28487679263632254 1.0 ['ENSG00000148841|ENST00000337478|ITPRIP'] 74714 7861 NGVDHRSYR True NCI_RA007_Epitope_Rep2 1102.5268036247 1102.52570993586 35.208 2 -0.9261990108370074 0.2848865877712032 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 563 7803 AAQQPHIAGV True PC9_epitope_Rep1 990.5246783663799 990.52358993586 34.838 2 -0.9264374532425772 0.2849785642865948 1.0 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 48622 3917 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 20.188 3 -0.9264531736321195 0.2849844543972826 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 30487 4480 GAGAQPYHGDK True NCI_RA007_Epitope_Rep5 1099.50467119779 1099.50356993586 23.883 2 -0.9264706157324605 0.2849844543972826 1.0 ['FZD7|p.E38D|1|0.11|ENSG00000155760|chr2:202034761-202034761|G/T|missense_variant'] 132167 8666 VTVPPDVFFF True NCI_RA007_Epitope_Rep3 1166.60119735158 1166.60010993586 41.168 2 -0.9265600821403538 0.28504903303566537 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 18391 6438 EITTFLYY True H1975_Epitope_Rep1 1048.51171364084 1048.5106099358602 29.825 2 -0.9265802372598372 0.2850588251407284 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF'] 72033 18788 METILNPYI True H1975_Epitope_Rep2 1092.5525329069999 1092.5514299358601 78.011 2 -0.9267070356823343 0.2851331918099021 1.0 ['ENSG00000106304|ENST00000682466|SPAM1', 'nc|ENSG00000106304|P38567-2|SPAM1'] 139789 9166 YPHEAWSF True PC9_epitope_Rep2 1035.44503106335 1035.44392993586 40.595 2 -0.9267123318052529 0.2851331918099021 1.0 ['ENSG00000174945|ENST00000683327|AMZ1', 'nc|ENSG00000174945|Q400G9-2|AMZ1', 'ENST00000489665.1_1_7:2742357-2804491:+|nuORF'] 76282 18989 NPLLSPRCSI True PC9_epitope_Rep4 1098.58556437078 1098.5844699358602 81.133 2 -0.9267615417212288 0.28513907720119974 1.0 ['nc|ENSG00000148541|Q8NE31-2|FAM13C', 'nc|ENSG00000148541|Q8NE31-3|FAM13C', 'nc|ENSG00000148541|Q8NE31-5|FAM13C', 'nc|ENSG00000148541|Q8NE31-4|FAM13C', 'ENSG00000148541|ENST00000618804|FAM13C'] 92550 27219 RMKKKKKLLPF True PC9_epitope_Rep3 1415.91628140639 1415.91463490379 112.02 3 -0.9267855170104559 0.28513907720119974 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 75197 15536 NIDLLEGITGF True NCI_RA007_Epitope_Rep3 1190.6183039677 1190.61720993586 68.672 2 -0.9268396630167445 0.2851625626557835 1.0 ['EIF3K|p.M125I|1|0.12|ENSG00000178982|chr19:38632450-38632450|G/T|missense_variant'] 69744 13472 LVFFFFFFLRQ True H1975_Epitope_Rep1 1509.8172785577697 1509.8161899358602 56.937 2 -0.9268735397110112 0.2852036973639165 1.0 ['ENST00000294008.3_1_16:3632019-3632346:-|nuORF'] 106810 13131 SVALACAHGHL True PC9_epitope_Rep2 1077.53894853153 1077.53784993586 55.781 2 -0.926874119163685 0.2852036973639165 1.0 ['ENST00000482108.1_2_7:94297339-94297486:+|nuORF'] 126536 5023 VLLLLVRKK True PC9_epitope_Rep1 1080.7746854698 1080.7735899358602 24.179 2 -0.9268877451041644 0.2852036973639165 1.0 ['nc|ENSG00000062038|P22223-2|CDH3', 'ENST00000542274.5_1_16:68679206-68732300:+|nuORF', 'ENSG00000062038|ENST00000264012|CDH3', 'ENST00000567674.1_1_16:68721613-68732300:+|nuORF'] 139189 7448 YLEQIKFYSYQ True H1975_Epitope_Rep1 1480.7238316654 1480.7227299358601 33.653 2 -0.926888032138191 0.2852036973639165 1.0 ['CTNNA3|p.H777Y|1|0.24|ENSG00000183230|chr10:65966683-65966683|G/A|missense_variant'] 44616 20918 ILRIQNLTI True PC9_epitope_Rep3 1082.68117900778 1082.68008993586 85.738 2 -0.9269139028731789 0.2852036973639165 1.0 ['CCDC88C|p.N72I|1|0.05|ENSG00000015133|chr14:91408714-91408714|T/A|missense_variant'] 100066 13799 SIRRHRWRRED True H1975_Epitope_Rep1 1565.8399731032098 1565.8388699358602 58.222 2 -0.9269171500573116 0.2852036973639165 1.0 ['ENST00000286181.7_1_2:201845995-201881890:-|nuORF', 'ENSG00000155744|ENST00000681958|HYCC2'] 461 20771 AALRERYLR True H1975_Epitope_Rep3 1146.6621748987 1146.66106993586 86.784 2 -0.9269228655137921 0.2852036973639165 1.0 ['ENSG00000142252|ENST00000270257|GEMIN7'] 83640 18196 PVDTRERGLK True PC9_epitope_Rep6 1169.6516697846498 1169.6500349037901 82.632 3 -0.9269775871070502 0.2852134856078657 1.0 ['ENSG00000274588|ENST00000611977|DGKK', 'DGKK|p.R206Efs*9|1|0.4|ENSG00000274588|chrX:50470064-50470064|G/-|frameshift_variant'] 92647 23315 RNKHKIHV True PC9_epitope_Rep2 1030.6148307834599 1030.6137299358602 95.157 2 -0.9270329111003796 0.28525066071453026 1.0 ['ENSG00000278053|ENST00000617633|DDX52', 'DDX52|p.L471Ffs*2|1|0.49|ENSG00000278053|chr17:37621215-37621215|C/-|frameshift_variant'] 92556 25245 RMKKKKKLLPF True PC9_epitope_Rep6 1415.91628140639 1415.91463490379 112.4 3 -0.9270470993661688 0.2852741414252068 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 29746 10986 FVNGDRRW True H1975_Epitope_Rep1 1048.52026169228 1048.5191699358602 47.224 2 -0.9270585544338585 0.2852839283024552 1.0 ['DMPK|p.L123F|1|0.63|ENSG00000104936|chr19:45779327-45779327|C/A|missense_variant'] 55187 8503 LAATEHDTML True PC9_epitope_Rep2 1100.5172100274401 1100.5161099358602 38.072 2 -0.9270653290802978 0.28529371491168015 1.0 ['nc|ENSG00000029534|P16157-14|ANK1', 'nc|ENSG00000029534|P16157-8|ANK1', 'nc|ENSG00000029534|P16157-12|ANK1', 'nc|ENSG00000029534|P16157-21|ANK1', 'nc|ENSG00000029534|P16157|ANK1', 'ENSG00000029534|ENST00000289734|ANK1', 'nc|ENSG00000029534|P16157-16|ANK1', 'nc|ENSG00000029534|P16157-5|ANK1', 'nc|ENSG00000029534|P16157-10|ANK1', 'ENST00000524227.5_1_8:41525962-41555361:-|nuORF'] 45450 7859 IQKEYFWHSYI True H1975_Epitope_Rep1 1512.74015043588 1512.73904993586 35.182 2 -0.9270861477209322 0.2853132873261036 1.0 ['SNX10|p.D24Y|1|0.27|ENSG00000086300|chr7:26361020-26361020|G/T|missense_variant'] 72694 1982 MMLCSECPTVF True NCI_RA007_Epitope_Rep1 1259.50585969171 1259.5047699358602 10.443 2 -0.9270912446251339 0.2853132873261036 1.0 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 24983 14453 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 60.95 2 -0.9271043005735554 0.2853152598069419 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 64026 15592 LPAFLPDCLDL True PC9_epitope_Rep4 1215.62094681999 1215.6193049037902 67.895 3 -0.927106217866496 0.2853152598069419 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 111695 9186 TIFLYDSTV True H1975_Epitope_Rep2 1057.53317736141 1057.53208993586 40.287 2 -0.9271102496348331 0.2853152598069419 1.0 ['ENST00000426799.1_1_X:65041564-65042074:-|nuORF'] 117215 14848 TVLLMRYAPRI True PC9_epitope_Rep1 1331.77476212279 1331.7731249037902 61.932 3 -0.9272063290018641 0.2853485219820091 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B'] 87468 9708 QQDPQQYNV True PC9_epitope_Rep1 1118.49925146418 1118.49867496793 42.199 1 -0.9272089124020766 0.2853485219820091 1.0 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant', 'AHR|p.T676A|1|0.11|ENSG00000106546|chr7:17339851-17339851|A/G|missense_variant'] 65172 12696 LQQECMRQL True PC9_epitope_Rep1 1147.54779896307 1147.54670993586 53.707 2 -0.9272201827361612 0.28535439970426757 1.0 ['ENSG00000061938|ENST00000672887|TNK2', 'nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF', 'TNK2|p.D734*|1|0.32|ENSG00000061938|chr3:195868054-195868055|-/C|frameshift_variant'] 49452 5855 KEYESYSDF True NCI_RA007_Epitope_Rep2 1166.4767846840998 1166.4756899358601 27.394 2 -0.9272638815072999 0.28535439970426757 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 33495 17791 GLCRFQIV True PC9_epitope_Rep5 934.5058574981 934.5047699358599 73.45 2 -0.9272776357344222 0.2853837518140248 1.0 ['nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENSG00000102910|ENST00000285737|LONP2', 'LONP2|p.G718Efs*31|1|0.19|ENSG00000102910|chr16:48348105-48348105|G/-|frameshift_variant', 'LONP2|p.D481Lfs*6|1|0.35|ENSG00000102910|chr16:48296067-48296073|CCTTTGA/-|frameshift_variant'] 41135 7766 HTWWKRPFLTM True NCI_RA007_Epitope_Rep2 1501.7652600682497 1501.76362490379 34.835 3 -0.92727827537951 0.2853837518140248 1.0 ['ENST00000375799.7_1_1:16054831-16055618:+|nuORF'] 117260 24580 TVLVHLEIKVL True NCI_RA007_Epitope_Rep5 1262.79620876002 1262.7951099358602 102.02 2 -0.9272957319565149 0.2853837518140248 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 43119 19063 IEYLHNAL True PC9_epitope_Rep5 971.5076313199099 971.50652993586 78.355 2 -0.9273118079140027 0.2853857211308098 1.0 ['ENST00000458725.5_1_13:50642253-50656006:-|nuORF'] 75200 4682 NIDLQPGSSD True NCI_RA007_Epitope_Rep4 1044.47236801 1044.4712699358602 24.43 2 -0.9273123675776052 0.2853857211308098 1.0 ['ENSG00000171840|ENST00000305108|NINJ2'] 101679 4447 SLLYYSYK True NCI_RA007_Epitope_Rep5 1035.5276980581498 1035.52660993586 23.748 2 -0.9273184476941654 0.2853857211308098 1.0 ['ENST00000585735.1_1_17:40342468-40343067:-|nuORF'] 46459 5576 ISTVELQK True NCI_RA007_Epitope_Rep3 916.5229470308799 916.52184993586 28.926 2 -0.9273483661895695 0.2854091942063905 1.0 ['ENST00000510089.5_1_5:87494777-87494978:-|nuORF', 'TMEM161B|p.L470Pfs*15|1|0.31|ENSG00000164180|chr5:88196266-88196266|A/-|frameshift_variant', 'ENSG00000164180|ENST00000296595|TMEM161B'] 83909 13752 PVPTTVPV True PC9_epitope_Rep6 808.4694549060399 808.46834993586 64.693 2 -0.9273592456506636 0.28542485181179755 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 92553 27564 RMKKKKKLLPF True PC9_epitope_Rep5 1415.91628140639 1415.91463490379 113.26 3 -0.9273678183745624 0.28542485181179755 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 59223 15841 LFELEIEALP True PC9_epitope_Rep1 1172.63289140268 1172.63125490379 65.747 3 -0.9273792855701742 0.28542485181179755 1.0 ['ENSG00000204209|ENST00000374542|DAXX', 'nc|ENSG00000204209|Q9UER7-3|DAXX', 'nc|ENSG00000204209|Q9UER7-5|DAXX', 'nc|ENSG00000204209|Q9UER7-4|DAXX', 'nc|ENSG00000204209|Q9UER7-2|DAXX'] 92547 27633 RMKKKKKLLPF True PC9_epitope_Rep1 1415.91628140639 1415.91463490379 113.24 3 -0.927468363947521 0.28549917181147416 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 87547 5919 QQLAQLQKEK True PC9_epitope_Rep1 1212.6826355597598 1212.68098490379 27.582 3 -0.9274730966430867 0.28549917181147416 1.0 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1', 'NCKAP1|p.H679Pfs*17|1|0.07|ENSG00000061676|chr2:182956579-182956580|-/TAAGAATAATGAACCGG|frameshift_variant'] 18321 5134 EISHPDRLY True H1975_Epitope_Rep2 1128.55637241748 1128.55471490379 24.825 3 -0.9275035983844914 0.2855187329746896 1.0 ['ENST00000584471.5_1_17:65375098-65375356:+|nuORF'] 89155 8914 QVRDWSHYFKI True PC9_epitope_Rep5 1477.7466327986497 1477.74499490379 39.232 3 -0.927526055184165 0.2855187329746896 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 64400 12629 LPLSPDWV True H1975_Epitope_Rep2 925.49091862661 925.49037496793 53.676 1 -0.927579478265683 0.2855285131546527 1.0 ['IFIT3|p.L268Ifs*33|1|0.08|ENSG00000119917|chr10:89339456-89339457|-/ATTA|frameshift_variant'] 31497 7545 GEAVVSAPSAP True H1975_Epitope_Rep3 983.4923751785899 983.49126993586 34.004 2 -0.9276523323766432 0.2855519813838889 1.0 ['ENST00000603475.1_1_9:90584039-90584273:-|nuORF'] 41849 7533 IAWPDWREKLH True NCI_RA007_Epitope_Rep1 1449.75171817909 1449.7500749037902 33.295 3 -0.9277412384878221 0.2855891371003066 1.0 ['ENST00000307063.8_1_5:159519224-159519386:-|nuORF'] 40417 18450 HQWWAIDDI True PC9_epitope_Rep3 1182.5458077337798 1182.54470993586 76.172 2 -0.9277704893503702 0.2856262917995538 1.0 ['FAM169A|p.D85H|1|0.18|ENSG00000198780|chr5:74839030-74839030|C/G|missense_variant'] 30934 11218 GARGGDRR True H1975_Epitope_Rep1 843.4423457247499 843.44179496793 48.121 1 -0.927815975898155 0.2856497577267377 1.0 ['ENST00000040877.1_1_1:234614313-234614457:-|nuORF'] 85486 12542 QFPGNSVAP True PC9_epitope_Rep5 915.4450310633499 915.4444849679301 53.242 1 -0.9278512551231428 0.2856595354439563 1.0 ['ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 60999 11838 LIEKVSLIIF True NCI_RA007_Epitope_Rep1 1173.7372969015698 1173.73564490379 50.029 3 -0.9278702412197454 0.28566931289351216 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 79972 12242 PEVDDDSI True PC9_epitope_Rep6 888.3712569864 888.37014993586 58.467 2 -0.9279007540631511 0.2857299280063508 1.0 ['ENSG00000139726|ENST00000280557|DENR'] 102185 9851 SLRVLRAA True H1975_Epitope_Rep2 884.5555845718399 884.55448993586 42.878 2 -0.9279876774139701 0.2857299280063508 1.0 ['ENST00000356663.7_2_19:1014392-1021086:-|nuORF'] 25180 18498 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 79.225 2 -0.9280213719480953 0.28573970409099 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 58547 9901 LEQLEKAI True NCI_RA007_Epitope_Rep1 942.5385970950199 942.53750993586 42.515 2 -0.9280777310454252 0.28574947990802585 1.0 ['ENSG00000242550|ENST00000238508|SERPINB10', 'SERPINB10|p.T269N|1|0.32|ENSG00000242550|chr18:63934854-63934854|C/A|missense_variant'] 124185 16124 VGSWQQAL True PC9_epitope_Rep5 887.4501164437899 887.44900993586 67.011 2 -0.9283070008488963 0.2858140012317799 1.0 ['ENST00000550554.5_1_14:105955152-105957428:+|nuORF'] 100994 13871 SLFSRYVDRQK True NCI_RA007_Epitope_Rep4 1397.7415474182096 1397.7404499358602 60.622 2 -0.9283397323437078 0.2858609221673259 1.0 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1', 'nc|ENSG00000166889|Q86TB9-3|PATL1'] 3167 6115 AGDTIRLEA True H1975_Epitope_Rep3 944.4927095317598 944.4921649679301 28.533 1 -0.9283451452875041 0.2858609221673259 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 123547 16769 VGPPSPFP True PC9_epitope_Rep3 796.41194002992 796.41084993586 69.648 2 -0.9284563163639054 0.28589806755351177 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'ENST00000607632.1_1_1:2985775-3103053:+|nuORF'] 137107 9692 YARERSPY True PC9_epitope_Rep4 1040.5039429218 1040.50284993586 44.914 2 -0.9285106913372732 0.285903909574832 1.0 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1', 'ENST00000551406.5_1_12:42720030-42768950:+|nuORF', 'nc|ENSG00000134283|Q8NEY8-5|PPHLN1', 'ENST00000552202.5_1_12:42726503-42792805:+|nuORF'] 47174 13870 ITYDFSFKSS True H1975_Epitope_Rep1 1193.56045473841 1193.5593499358602 58.5 2 -0.9285495202622569 0.285903909574832 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 34480 7238 GPLGPDEK True PC9_epitope_Rep2 811.40758292547 811.40648993586 33.23 2 -0.9285632520614063 0.285903909574832 1.0 ['ENSG00000099954|ENST00000262608|CECR2', 'nc|ENSG00000099954|Q9BXF3|CECR2'] 117759 7101 TVVLQAFGK True NCI_RA007_Epitope_Rep4 961.5596668927699 961.55856993586 33.934 2 -0.9285666699627475 0.285903909574832 1.0 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF'] 82169 24765 PNQALAITK True PC9_epitope_Rep4 954.5498304850599 954.54872993586 103.76 2 -0.9285688220410302 0.285903909574832 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 99782 23303 SIITYKLLTKK True PC9_epitope_Rep6 1306.8224235078599 1306.8213299358601 102.74 2 -0.9285762566133697 0.285903909574832 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 45802 13505 ISDARSDLL True PC9_epitope_Rep1 988.5189242796 988.51782993586 56.802 2 -0.9285923533114442 0.285903909574832 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3', 'ENSG00000132970|ENST00000335327|WASF3'] 19538 14409 ELPSHGVPL True PC9_epitope_Rep1 947.5076313199099 947.50652993586 60.247 2 -0.9285986228374172 0.285903909574832 1.0 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 53422 11611 KRAERRREYYE True NCI_RA007_Epitope_Rep2 1554.80152190582 1554.8004299358602 49.756 2 -0.9285996317895745 0.285903909574832 1.0 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF', 'ENST00000588247.5_1_19:45543470-45543635:+|nuORF'] 87033 27768 QMTNDDIKRIG True PC9_epitope_Rep5 1289.6397847716098 1289.63812490379 114.33 3 -0.9286423492390018 0.28591368127206546 1.0 ['ENSG00000142627|ENST00000358432|EPHA2'] 98725 23019 SGGGGGGGGD True NCI_RA007_Epitope_Rep1 676.24124587636 676.24069496793 94.589 1 -0.9286720077836924 0.2859234527018706 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 49264 9847 KEQLNEYKG True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 45.527 2 -0.9287616211522013 0.28595276538682574 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 80405 23159 PGIVKKLLRR True PC9_epitope_Rep6 1178.7975461726999 1178.7964499358602 102.18 2 -0.9287880332633107 0.28595276538682574 1.0 ['ENSG00000180801|ENST00000315366|ARSJ'] 66823 9836 LSMDPPFWGLK True PC9_epitope_Rep2 1289.64783027417 1289.64619490379 43.17 3 -0.9288054483015343 0.28595276538682574 1.0 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|86|3|anti-sense'] 133071 23414 VVPRGGLRG True H1975_Epitope_Rep3 909.5508335445699 909.54972993586 97.728 2 -0.9288247083312199 0.28596253574702735 1.0 ['ENST00000610187.1_1_9:137000377-137000500:-|nuORF'] 37134 17572 GVQAGRGA True PC9_epitope_Rep6 714.3772858566998 714.37673496793 80.23 1 -0.9288916645755964 0.2859723058398555 1.0 ['ENST00000464994.5_1_2:102608489-102626165:+|nuORF', 'ENST00000332549.7_1_2:102608419-102626165:+|nuORF'] 11081 16538 DCDCDCAD True PC9_epitope_Rep6 858.18300491786 858.18190993586 76.053 2 -0.9289013075843151 0.285978162712421 1.0 ['ENSG00000213139|ENST00000307944|CRYGS', 'CRYGS|p.T32K|1|0.29|ENSG00000213139|chr3:186539524-186539524|G/T|missense_variant'] 88747 7713 QTLTNLVSA True PC9_epitope_Rep2 945.51311062317 945.51200993586 35.043 2 -0.9289063182881421 0.285978162712421 1.0 ['ENST00000454309.6_1_3:192126033-192126612:-|nuORF'] 19332 13037 ELLDEMQRLLY True H1975_Epitope_Rep1 1421.72245176641 1421.7213499358602 55.232 2 -0.9289503510430083 0.28598205001915394 1.0 ['nc|ENSG00000183647|Q6P9A1|ZNF530'] 121748 11623 VFLVSVPAAP True H1975_Epitope_Rep1 998.5800679841798 998.57896993586 49.699 2 -0.9289560758404429 0.28598205001915394 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 77767 14095 NTQDEC[Carbamidomethyl]AEY True H1975_Epitope_Rep2 1128.4029684002699 1128.40186993586 59.371 2 -0.928956693000169 0.28598205001915394 1.0 ['SPINK5|p.N755Mfs*27|1|0.19|ENSG00000133710|chr5:148119004-148119004|A/-|frameshift_variant', 'nc|ENSG00000133710|Q9NQ38-2|SPINK5', 'ENSG00000133710|ENST00000256084|SPINK5', 'nc|ENSG00000133710|Q9NQ38-3|SPINK5'] 82187 25411 PNTVIILIG True PC9_epitope_Rep2 938.5800679841799 938.57896993586 103.43 2 -0.9289617800996803 0.28598205001915394 1.0 ['ENSG00000119396|ENST00000373840|RAB14'] 82188 24677 PNTVIILIG True PC9_epitope_Rep4 938.5800679841799 938.57896993586 103.41 2 -0.9289671952219618 0.28598205001915394 1.0 ['ENSG00000119396|ENST00000373840|RAB14'] 62300 6994 LLFYETYGKN True NCI_RA007_Epitope_Rep3 1246.6233893481397 1246.6222899358602 34.619 2 -0.9289693458304885 0.28598205001915394 1.0 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2'] 63823 25739 LNIRVERLTKK True PC9_epitope_Rep4 1368.8565176007999 1368.85542993586 108.43 2 -0.9290791290233034 0.28600744226770275 1.0 ['ENSG00000144224|ENST00000272638|UBXN4'] 139564 10795 YLVHAHYVP True PC9_epitope_Rep1 1097.56581490237 1097.56470993586 46.41 2 -0.9290911047346456 0.28600744226770275 1.0 ['ENST00000379982.7_1_5:95072755-95084126:+|nuORF'] 22772 5151 ETWDWFSWLFL True H1975_Epitope_Rep1 1528.7027022979998 1528.70104490379 24.88 3 -0.929095202593516 0.28600744226770275 1.0 ['nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-8|CD44'] 18287 13275 EIRNAFDL True PC9_epitope_Rep3 976.4977949121999 976.49668993586 56.097 2 -0.9291182163875972 0.28600744226770275 1.0 ['ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 239 19553 AAGAPNLVLAA True PC9_epitope_Rep1 966.5498304850599 966.54872993586 80.035 2 -0.9291791847745009 0.286040657747134 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 41610 7784 IADQTALRVPS True H1975_Epitope_Rep1 1169.6404363946099 1169.6393299358601 34.896 2 -0.929187097500122 0.286040657747134 1.0 ['ENSG00000163424|ENST00000295622|TEX55'] 141127 8890 YSRYPWHRFPV True H1975_Epitope_Rep3 1506.75205253226 1506.75094993586 39.196 2 -0.9292100276261785 0.2860504247664127 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75'] 25014 2744 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 14.533 2 -0.9292671564876052 0.28611099711358257 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 19388 8554 ELLTFQEWYYK True H1975_Epitope_Rep3 1518.7394817295396 1518.7383899358601 37.891 2 -0.9293044456309936 0.28611099711358257 1.0 ['CARD11|p.R179W|1|0.05|ENSG00000198286|chr7:2944361-2944361|G/A|missense_variant'] 57046 8749 LDRYGRTVL True PC9_epitope_Rep6 1091.60874234351 1091.60764993586 43.543 2 -0.9293138032899455 0.28611878641971933 1.0 ['POTEM|p.V346Ffs*7|1|0.11|ENSG00000222036|chr14:18977584-18977584|G/-|frameshift_variant', 'ENSG00000222036|ENST00000547889|POTEM'] 78907 7134 PAGKVQIVS True PC9_epitope_Rep3 897.52836676449 897.52726993586 32.448 2 -0.9293298160228854 0.28611878641971933 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 25308 6815 FDRAGHCE True H1975_Epitope_Rep3 933.3762998805299 933.37520993586 31.167 2 -0.9293729505242506 0.28611878641971933 1.0 ['nc|ENSG00000173264|Q96N19-3|GPR137', 'ENSG00000173264|ENST00000438980|GPR137', 'nc|ENSG00000173264|Q96N19|GPR137', 'nc|ENSG00000173264|Q96N19-4|GPR137'] 13653 9267 DPPAWDAP True PC9_epitope_Rep1 867.3762827971899 867.37518993586 40.498 2 -0.9293829778051771 0.28611878641971933 1.0 ['nc|ENSG00000149182|Q8N6H7-2|ARFGAP2'] 136694 12005 WWWRRRRRHR True NCI_RA007_Epitope_Rep2 1649.9140815333299 1649.9129899358602 51.288 2 -0.929386146709541 0.28611878641971933 1.0 ['ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF', 'ENST00000395136.6_2_1:70687096-70687432:+|nuORF'] 112664 17936 TLFRGKVP True PC9_epitope_Rep3 916.5494365622399 916.54832993586 74.194 2 -0.9295163429185792 0.28621840463945725 1.0 ['ENSG00000110536|ENST00000326674|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-2|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-3|PTPMT1'] 80594 5720 PGQGPTEEAR True PC9_epitope_Rep3 1040.4886867804798 1040.4875899358601 27.074 2 -0.9295406486856277 0.28621840463945725 1.0 ['ENST00000457926.5_1_16:90039106-90044150:+|nuORF'] 20975 17388 EQQKWVSRLVK True NCI_RA007_Epitope_Rep2 1399.79358299107 1399.7924899358602 72.378 2 -0.9295591152340595 0.28621840463945725 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 60383 18930 LGTKRLPQDLI True PC9_epitope_Rep4 1252.7503211967598 1252.74922993586 80.902 2 -0.9295619420498484 0.28621840463945725 1.0 ['HS3ST2|p.A117D|1|0.43|ENSG00000122254|chr16:22814960-22814960|C/A|missense_variant'] 85630 25178 QGKYIAIA True PC9_epitope_Rep3 862.4912529797798 862.49070496793 102.21 1 -0.9295642069836776 0.28621840463945725 1.0 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000465640.1_1_X:153670288-153671016:+|nuORF', 'ENST00000468483.5_1_X:153669954-153671016:+|nuORF', 'ENST00000460984.1_1_X:153670432-153670829:+|nuORF', 'ENST00000491154.1_1_X:153669954-153670603:+|nuORF'] 9135 7766 AVKNENRFYLK True H1975_Epitope_Rep3 1380.75138382592 1380.75028993586 34.857 2 -0.9295761770441284 0.28621840463945725 1.0 ['ENSG00000005893|ENST00000200639|LAMP2', 'nc|ENSG00000005893|P13473-2|LAMP2', 'nc|ENSG00000005893|P13473-3|LAMP2'] 59423 16727 LFMKVFWFVFF True H1975_Epitope_Rep1 1509.7882869286098 1509.7871899358602 69.737 2 -0.9296296935711046 0.2862555222737406 1.0 ['ENST00000276569.7_1_8:66516226-66516463:-|nuORF'] 71513 4265 LYYYRDRDWRW True H1975_Epitope_Rep3 1690.8004592766597 1690.7988149037901 21.523 3 -0.9296771039557692 0.286306316163799 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 4658 12969 ALAGRRVP True PC9_epitope_Rep1 838.5137197598599 838.51262993586 54.757 2 -0.9297047524770241 0.2863297544963414 1.0 ['ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF'] 138959 19657 YKKQFLFLIL True NCI_RA007_Epitope_Rep5 1311.7954804840297 1311.7943899358602 82.524 2 -0.9297346175406762 0.2863355991082785 1.0 ['ENST00000449237.4_1_Y:2803717-2829201:+|nuORF'] 112207 22907 TKKKIKGI True H1975_Epitope_Rep1 914.6276868829398 914.62658993586 95.261 2 -0.9297347892227948 0.2863355991082785 1.0 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1', 'nc|ENSG00000113580|P04150-10|NR3C1', 'nc|ENSG00000113580|P04150-16|NR3C1'] 36775 5401 GVKTENND True PC9_epitope_Rep3 875.39847479375 875.39736993586 25.847 2 -0.929767879813264 0.2863551197363202 1.0 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2'] 25088 20445 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 84.599 2 -0.9298080722627421 0.2863551197363202 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 20462 13635 EPIEYYWQRIR True NCI_RA007_Epitope_Rep2 1551.78341223019 1551.7823099358602 57.676 2 -0.9298461132277669 0.2863648796498906 1.0 ['CLMP|p.V163E|1|0.12|ENSG00000166250|chr11:123083748-123083748|A/T|missense_variant'] 24985 15604 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 65.437 2 -0.9298641814792514 0.2863746392965085 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 88636 6106 QTEKETMQD True H1975_Epitope_Rep2 1108.47065375784 1108.4695499358602 28.464 2 -0.9299012842684705 0.2863804822012226 1.0 ['CON__P05784'] 59789 18794 LGEKYDEWV True PC9_epitope_Rep6 1137.5342399905699 1137.5331499358601 84.932 2 -0.9299196781314323 0.2863804822012226 1.0 ['ENSG00000103089|ENST00000219368|FA2H'] 119036 13765 VAFVNISRTVL True PC9_epitope_Rep5 1217.71320741205 1217.71210993586 57.969 2 -0.9299824852670077 0.28639800899779844 1.0 ['ENSG00000257335|ENST00000475668|MGAM', 'nc|ENSG00000257335|O43451-1|MGAM', 'ENST00000485078.1_1_7:141794591-141795514:+|nuORF'] 46934 12396 ITNWEREFRTW True H1975_Epitope_Rep1 1536.74736107464 1536.74626993586 52.715 2 -0.9299836965895989 0.28639800899779844 1.0 ['ENSG00000124177|ENST00000373233|CHD6', 'nc|ENSG00000124177|Q8TD26-3|CHD6'] 42011 6911 IDGGAGGDSGT True H1975_Epitope_Rep3 905.37265396873 905.37154993586 31.543 2 -0.9300424067011137 0.28639800899779844 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'ENST00000368126.2_1_6:131179278-131186801:-|nuORF'] 56567 10498 LDGSKRRRLT True NCI_RA007_Epitope_Rep2 1200.7051023398399 1200.70400993586 45.429 2 -0.9300709718310644 0.28639800899779844 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF', 'ENST00000541061.1_1_4:110897303-110898417:+|nuORF'] 120733 9854 VEKMQQRQDRR True H1975_Epitope_Rep1 1472.7630282221198 1472.76192993586 42.836 2 -0.9300785656763594 0.28639800899779844 1.0 ['ENST00000468290.1_1_9:136198707-136199617:-|nuORF', 'ENSG00000148296|ENST00000372022|SURF6'] 3038 8302 AFQNREEP True PC9_epitope_Rep1 989.4566583762098 989.45556993586 36.767 2 -0.9301057040935697 0.28639800899779844 1.0 ['nc|ENSG00000120156|Q02763-3|TEK'] 92237 18271 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 80.014 2 -0.9301162720021202 0.28640776699029125 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.D894Mfs*7|1|0.87|ENSG00000160007|chr19:46921354-46921354|A/-|frameshift_variant'] 25013 2620 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 13.86 2 -0.9301610617291407 0.2864272821746978 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 85590 8754 QGGSKPRSRKD True NCI_RA007_Epitope_Rep1 1214.6479813865399 1214.6468899358601 38.053 2 -0.9301724019836376 0.2864272821746978 1.0 ['ENST00000335500.8_1_17:42478071-42478113:-|nuORF'] 49172 8724 KELNEQFKRKI True NCI_RA007_Epitope_Rep5 1431.8197977389098 1431.8187099358602 40.221 2 -0.9301860975604668 0.28643312276095934 1.0 ['nc|ENSG00000147606|Q8TE54-2|SLC26A7', 'ENSG00000147606|ENST00000276609|SLC26A7'] 36894 7481 GVLPGGHL True NCI_RA007_Epitope_Rep4 748.42317341996 748.42206993586 35.421 2 -0.9301872111843568 0.28643312276095934 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 63168 12167 LLRQVDENWY True H1975_Epitope_Rep2 1334.6619001151798 1334.66026490379 51.884 3 -0.9302911310403424 0.28646239249627414 1.0 ['PDLIM1-SORBS1|3|fusion', 'PDLIM1-SORBS1|4|fusion', 'PDLIM1-SORBS1|1|fusion', 'PDLIM1-SORBS1|5|fusion', 'PDLIM1-SORBS1|2|fusion', 'nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'PDLIM1-SORBS1|11|fusion', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'PDLIM1-SORBS1|9|fusion', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'PDLIM1-SORBS1|7|fusion', 'PDLIM1-SORBS1|10|fusion', 'PDLIM1-SORBS1|8|fusion', 'nc|ENSG00000095637|Q9BX66-4|SORBS1'] 114191 7758 TPLHTAAHFG True PC9_epitope_Rep4 1050.52467836638 1050.5235899358602 37.232 2 -0.9303093588177356 0.28646239249627414 1.0 ['nc|ENSG00000005981|Q9Y574-2|ASB4', 'ENSG00000005981|ENST00000325885|ASB4'] 62459 16794 LLHYYLLNYAK True H1975_Epitope_Rep1 1409.7707222881702 1409.7696299358602 70.002 2 -0.9303171425952025 0.28646239249627414 1.0 ['ENSG00000179941|ENST00000650064|BBS10'] 86975 9988 QLWTVYCEQS True PC9_epitope_Rep1 1255.5543238121497 1255.5532299358601 43.283 2 -0.9303881356730668 0.2864799092189273 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 59463 5753 LFQDYERWVRP True PC9_epitope_Rep2 1507.7571974823497 1507.75555490379 27.522 3 -0.9303883486597525 0.2864799092189273 1.0 ['ENSG00000169684|ENST00000299565|CHRNA5'] 80666 14199 PGTFEVVV True H1975_Epitope_Rep2 846.4487194614599 846.44762993586 59.767 2 -0.9304207231354146 0.2864799092189273 1.0 ['HEPH|p.E1033V|1|0.13|ENSG00000089472|chrX:66260161-66260161|A/T|missense_variant'] 15818 20623 EDEEDEEDDDV True PC9_epitope_Rep3 1337.42665915569 1337.42500490379 84.596 3 -0.9304654359147967 0.2864799092189273 1.0 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 82758 26069 PRLGLLMMI True PC9_epitope_Rep5 1042.60312901122 1042.6020299358602 105.89 2 -0.9304781014913989 0.2864799092189273 1.0 ['ENSG00000177383|ENST00000317897|MAGEF1'] 66541 11070 LSHWKRSLF True PC9_epitope_Rep2 1172.6454622054 1172.6438249037901 47.899 3 -0.9304786280160963 0.2864799092189273 1.0 ['ENST00000369847.3_2_10:105086334-105104817:-|nuORF'] 114306 15914 TPQGQDYADHR True NCI_RA007_Epitope_Rep5 1286.5639769790598 1286.5628699358601 67.941 2 -0.9305268508884883 0.2865033358853768 1.0 ['nc|ENSG00000198276|Q9NWZ5-3|UCKL1'] 23593 16602 EWDAFDLKTK True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 69.236 2 -0.9305618684603072 0.28652676191127213 1.0 ['ENST00000460138.5_1_6:7882234-7882414:-|nuORF'] 72460 9670 MKVRIFLKK True NCI_RA007_Epitope_Rep3 1161.74200544253 1161.7403549037901 45.115 3 -0.9306288607254823 0.2865325987395245 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 19381 10672 ELLRWKEDP True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 46.038 2 -0.930660260106775 0.2865325987395245 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'ENST00000606296.1_1_3:18393447-18393747:-|nuORF', 'ENST00000467628.1_1_3:18393447-18419817:-|nuORF'] 136167 20348 WRRRPRTRR True H1975_Epitope_Rep3 1338.7969860924197 1338.79588993586 85.085 2 -0.9306927912398547 0.2865423524908405 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 61498 11269 LKDSLQDYQ True NCI_RA007_Epitope_Rep2 1108.5400536470001 1108.53894993586 48.42 2 -0.9307752752075898 0.2865521059754747 1.0 ['ENST00000555559.5_1_14:65946487-66028150:+|nuORF', 'ENST00000554610.1_2_14:65879917-66028150:+|nuORF', 'ENST00000553924.5_1_14:65983061-66028150:+|nuORF', 'ENST00000394586.6_1_14:65878636-66028150:+|nuORF'] 123317 10286 VGLRDGVL True PC9_epitope_Rep4 827.4865019525099 827.48540993586 47.25 2 -0.9308503670484017 0.2865892002734108 1.0 ['nc|ENSG00000082684|Q9P283-2|SEMA5B', 'nc|ENSG00000082684|Q9P283-3|SEMA5B', 'ENSG00000082684|ENST00000357599|SEMA5B', 'nc|ENSG00000082684|Q9P283-4|SEMA5B'] 124605 11209 VGVVRKYL True PC9_epitope_Rep2 932.5807366905199 932.5801849679301 48.441 1 -0.9308947324807417 0.2866047872267713 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 55443 12581 LAFLGKSVGP True PC9_epitope_Rep2 987.5753169569099 987.57420993586 53.699 2 -0.9309188102487083 0.2866047872267713 1.0 ['ENST00000336798.11_2_1:31344819-31345005:-|nuORF'] 131830 9118 VTQQRHSTRK True H1975_Epitope_Rep1 1239.6796158679897 1239.6785099358601 39.976 2 -0.9309203409880763 0.2866047872267713 1.0 ['ENST00000465950.5_1_12:46320976-46321084:-|nuORF'] 63721 8032 LNDAESVLLK True H1975_Epitope_Rep1 1100.607739284 1100.60664993586 35.839 2 -0.9310138513066883 0.2866516301004716 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.F1569Sfs*24|1|0.14|ENSG00000197653|chr12:123838611-123838611|C/-|frameshift_variant', 'DNAH10|p.K1629Rfs*13|1|0.48|ENSG00000197653|chr12:123841424-123841424|A/-|frameshift_variant', 'ENST00000467219.5_1_12:124265674-124298205:+|nuORF', 'nc|ENSG00000197653|Q8IVF4-2|DNAH10'] 252 10389 AAGDKWKPP True H1975_Epitope_Rep3 968.5079656730799 968.50686993586 45.018 2 -0.9310160442767857 0.2866516301004716 1.0 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'ENST00000532127.5_1_8:144902796-144911473:-|nuORF', 'ENST00000526151.5_1_8:144903610-144911473:-|nuORF'] 62395 17184 LLGRYVVER True PC9_epitope_Rep5 1103.6451278522297 1103.64402993586 71.119 2 -0.9310380413271573 0.2866750505768495 1.0 ['ENSG00000188760|ENST00000373883|TMEM198'] 126122 10979 VLETRYTL True PC9_epitope_Rep3 993.5494961318899 993.54838993586 47.217 2 -0.9311073481369972 0.28668480118102163 1.0 ['ENSG00000257743|ENST00000477922|MGAM2', 'ENST00000496337.1_1_7:141870985-141908039:+|nuORF'] 72463 9926 MKVRIFLKK True NCI_RA007_Epitope_Rep5 1161.74200544253 1161.7403549037901 44.823 3 -0.9311349849331939 0.28669063273144796 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 8343 6771 ATKSLCHFY True H1975_Epitope_Rep2 1068.5062514209199 1068.5051499358601 30.96 2 -0.9311483114584717 0.28669063273144796 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF', 'ENST00000513604.5_1_5:148406133-148406409:-|nuORF'] 15286 11820 EAFEHENK True PC9_epitope_Rep3 1002.4406739589 1002.43956993586 50.483 2 -0.9311942833364629 0.2866944577325224 1.0 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 20026 6662 ELYSFVWFHYP True H1975_Epitope_Rep3 1486.6921376143 1486.69048490379 30.577 3 -0.931202632691215 0.2866944577325224 1.0 ['ENSG00000169006|ENST00000306928|NTSR2'] 13919 19324 DQWYLWYLRLL True PC9_epitope_Rep5 1567.8187351097497 1567.8170849037901 79.374 3 -0.9312192777492195 0.2866944577325224 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 25090 21014 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 86.924 2 -0.9312381420433845 0.2866944577325224 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 52646 11090 KLRNKTMWHSI True NCI_RA007_Epitope_Rep4 1412.77107372468 1412.7699699358602 49.531 2 -0.9312534152590999 0.2866944577325224 1.0 ['OR4Q3|p.I304Nfs*?|1|0.36|ENSG00000182652|chr14:19748336-19748337|-/A|frameshift_variant'] 63185 8878 LLRRWWRPICY True H1975_Epitope_Rep3 1560.8499927517198 1560.8488899358601 39.15 2 -0.9312606300252997 0.2866944577325224 1.0 ['ENST00000513185.1_1_5:98109449-98109824:+|nuORF'] 125462 9791 VIVKPMPGK True H1975_Epitope_Rep1 967.5888588460698 967.58776993586 42.588 2 -0.931292309762959 0.28672762310877853 1.0 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'nc|ENSG00000154305|Q5JRA6-4|MIA3'] 124637 21394 VGWQHVPII True PC9_epitope_Rep4 1047.58655034695 1047.5854499358602 90.461 2 -0.9313056459911278 0.28672762310877853 1.0 ['ENSG00000139410|ENST00000403593|SDSL'] 10717 17740 CRRRRRRRRLF True H1975_Epitope_Rep1 1629.9811155473296 1629.9800099358602 73.834 2 -0.9313462479211407 0.286751038705445 1.0 ['ENST00000550735.6_1_12:112280040-112280175:+|nuORF'] 128879 14617 VQENFLLKFQ True NCI_RA007_Epitope_Rep2 1264.6815729305997 1264.6804699358602 61.523 2 -0.9314049942490569 0.28677445366207 1.0 ['ENSG00000172137|ENST00000302628|CALB2', 'ENST00000522070.1_1_8:91075288-91075656:-|nuORF', 'nc|ENSG00000104327|P05937-2|CALB1', 'ENSG00000104327|ENST00000265431|CALB1'] 115942 3476 TSGSSGSSTK True PC9_epitope_Rep2 897.4039540970101 897.40284993586 18.65 2 -0.9314674258239489 0.2867763625430493 1.0 ['ENSG00000137776|ENST00000380516|SLTM'] 16182 7381 EEEDDDYNK True NCI_RA007_Epitope_Rep4 1155.4203920067898 1155.4192899358602 35.033 2 -0.9314690922449547 0.2867763625430493 1.0 ['ENSG00000163623|ENST00000295886|NKX6-1'] 14038 11980 DRLKGFRVY True PC9_epitope_Rep3 1152.64037682496 1152.63874490379 51.106 3 -0.9314883446806161 0.2867763625430493 1.0 ['ENSG00000220948|ENST00000534741|TRIM51G'] 3759 10979 AGSTPRIQGL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 47.22 2 -0.9314974310699191 0.2867821903954957 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 58552 5099 LEQLKPRAK True NCI_RA007_Epitope_Rep2 1081.6607779163699 1081.6596899358601 24.457 2 -0.9315252709064353 0.2867821903954957 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 37189 4224 GVQSRWRRE True PC9_epitope_Rep4 1172.61628733544 1172.61463490379 22.622 3 -0.9315637845996447 0.28679193713700035 1.0 ['ENST00000432521.2_1_1:2484838-2485120:-|nuORF'] 25020 12219 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 51.497 2 -0.9315926339258542 0.28681534929485075 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 83851 18114 PVMEGDLMQL True PC9_epitope_Rep3 1131.5304175634299 1131.52930993586 74.872 2 -0.9316038243515161 0.28682509531683453 1.0 ['nc|ENSG00000175161|Q8N3J6-4|CADM2', 'nc|ENSG00000175161|Q8N3J6-5|CADM2', 'ENSG00000175161|ENST00000383699|CADM2', 'nc|ENSG00000175161|Q8N3J6|CADM2', 'nc|ENSG00000175161|Q8N3J6-3|CADM2'] 71948 10193 MERWIKEHREY True NCI_RA007_Epitope_Rep1 1575.76163123979 1575.7599749037902 43.66 3 -0.9316117563437035 0.28682689548690343 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50'] 24987 16338 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 68.319 2 -0.9316368529234718 0.28682689548690343 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 19658 14128 ELREATWYELR True H1975_Epitope_Rep3 1464.7361276845998 1464.7350299358602 59.673 2 -0.9316495818468961 0.28682689548690343 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 124186 5835 VGSWWYRSIRY True PC9_epitope_Rep5 1471.7360681149498 1471.7344349037899 27.436 3 -0.9316765424166344 0.28682689548690343 1.0 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant'] 78911 8787 PAGLGNAPV True PC9_epitope_Rep2 794.42865272322 794.42754993586 39.153 2 -0.9316810875137399 0.28682689548690343 1.0 ['ENST00000456353.5_1_10:80721072-80808596:-|nuORF'] 130985 11357 VTDNRYEP True NCI_RA007_Epitope_Rep1 992.4563240230399 992.45522993586 48.15 2 -0.9317821599762881 0.28682689548690343 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 82422 13336 PPPFFAVC True NCI_RA007_Epitope_Rep4 876.4203965386398 876.41928993586 58.449 2 -0.9317827801102814 0.28682689548690343 1.0 ['ENST00000216181.9_1_22:36678235-36678298:-|nuORF'] 123457 13831 VGPAAVIVLVN True PC9_epitope_Rep4 1050.6437308698999 1050.6426299358602 61.099 2 -0.9318529466466751 0.28682689548690343 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000465256.5_1_1:32201179-32202160:-|nuORF'] 99813 13560 SIKRFRAR True NCI_RA007_Epitope_Rep2 1032.6304808475998 1032.6293899358602 57.384 2 -0.9318548918271217 0.28682689548690343 1.0 ['nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 60121 9878 LGLTQTCETLK True H1975_Epitope_Rep3 1205.6325741328499 1205.6314699358602 43.025 2 -0.9318594496071114 0.28682689548690343 1.0 ['ENSG00000169896|ENST00000544665|ITGAM', 'nc|ENSG00000169896|P11215-2|ITGAM'] 107065 10802 SVGLLTNEL True PC9_epitope_Rep6 944.5178616504401 944.51676993586 52.392 2 -0.9318866434121399 0.2868385457228348 1.0 ['ENSG00000198483|ENST00000355594|ANKRD35'] 81077 16135 PISLTHTGIH True PC9_epitope_Rep2 1074.5821932425 1074.58108993586 67.321 2 -0.9318921181137547 0.2868385457228348 1.0 ['ENST00000442218.2_1_12:48174732-48175212:+|nuORF'] 88394 20963 QSLIPFVQL True PC9_epitope_Rep6 1043.60153170475 1043.60097496793 93.426 1 -0.9319260865871951 0.2868385457228348 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 130573 21347 VSRSRSRSRSR True PC9_epitope_Rep5 1332.7446757360399 1332.74302490379 87.17 3 -0.9319526441096979 0.2868385457228348 1.0 ['nc|ENSG00000161547|Q01130-2|SRSF2', 'ENSG00000161547|ENST00000359995|SRSF2'] 48914 7756 KEDQTEYLEER True NCI_RA007_Epitope_Rep1 1438.65760258038 1438.6565099358602 34.16 2 -0.9320250518676625 0.2868619521259154 1.0 ['nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENSG00000080824|ENST00000216281|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 25200 19869 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 89.085 2 -0.9320616981482129 0.28687751895621283 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 127776 15525 VPDILWIPP True H1975_Epitope_Rep2 1048.59571804832 1048.5946299358602 64.872 2 -0.9320692376408325 0.28687751895621283 1.0 ['ENST00000446848.6_1_7:26412554-26412734:+|nuORF'] 22848 15408 EVAVEDKRI True PC9_epitope_Rep5 1057.5767735088898 1057.57566993586 64.276 2 -0.9320738239195524 0.28687751895621283 1.0 ['BMI1|p.D119V|1|0.16|ENSG00000168283|chr10:22327989-22327989|A/T|missense_variant'] 91329 10458 RGRRPERNYQH True NCI_RA007_Epitope_Rep1 1467.75557477291 1467.75446993586 44.662 2 -0.9321001593635373 0.2869145854964752 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant', 'ENST00000471538.1_1_1:16200459-16203174:+|nuORF'] 84315 7826 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 35.046 2 -0.932203643697082 0.28692622950819674 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 68816 13870 LTLQRQGFTM True H1975_Epitope_Rep1 1193.62267815549 1193.6215899358601 58.5 2 -0.9322221545916124 0.28692622950819674 1.0 ['ENST00000566975.5_1_16:57824936-57828961:-|nuORF'] 20014 23409 ELYINYDCDYY True PC9_epitope_Rep5 1472.58059812964 1472.5795099358602 95.025 2 -0.9322226260432782 0.28692622950819674 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 113483 13140 TLSYCLPLPP True PC9_epitope_Rep2 1102.5732683515798 1102.57216993586 55.815 2 -0.9322540615346472 0.28692622950819674 1.0 ['ENST00000565912.1_1_16:57411753-57412206:+|nuORF'] 131311 16811 VTGGYDYD True PC9_epitope_Rep3 888.350127619 888.34902993586 69.814 2 -0.9322643748084528 0.2869320510368569 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 632 6102 AASQRMEP True PC9_epitope_Rep1 888.4123510360799 888.41124993586 28.285 2 -0.932274593200915 0.2869320510368569 1.0 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 133248 1409 VVTKEKLLLE True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 7.4604 3 -0.9323689127983683 0.2869827739300302 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 113236 5466 TLQSEHDTL True PC9_epitope_Rep4 1042.49310345458 1042.49200993586 27.772 2 -0.9324373562797438 0.2870022539444027 1.0 ['ENSG00000135968|ENST00000309863|GCC2', 'ENST00000393321.2_3_2:109102933-109106471:+|nuORF'] 36735 9049 GVKGAKIK True PC9_epitope_Rep1 799.5279728416699 799.52686993586 39.658 2 -0.9324380536126119 0.2870022539444027 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 78900 19601 PAGGRCVR True PC9_epitope_Rep3 814.4231905032999 814.4226449679301 80.632 1 -0.9325134879813121 0.287025653634948 1.0 ['ENSG00000103260|ENST00000568223|METRN'] 24975 18597 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 77.547 2 -0.9325360950015827 0.28702755125735907 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 85197 9982 QEPVLMYYRQ True PC9_epitope_Rep5 1325.64380752289 1325.64270993586 43.371 2 -0.9325813953959575 0.28702755125735907 1.0 ['ENST00000450376.1_1_22:38284470-38284539:+|nuORF'] 14518 12858 DTLQQREQQLL True NCI_RA007_Epitope_Rep2 1370.7153922400198 1370.71428993586 54.634 2 -0.9326246279485251 0.28702755125735907 1.0 ['ENST00000445336.2_1_X:74802783-74803698:+|nuORF'] 65734 22980 LSCRRWVPRRL True PC9_epitope_Rep5 1440.8248406330397 1440.8237499358602 93.383 2 -0.9326526489618867 0.2870509493238629 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1'] 37614 6750 GVVTPKEL True PC9_epitope_Rep1 841.4909186266099 841.48982993586 30.769 2 -0.932695515113163 0.2870606876015899 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-5|USP16', 'ENST00000474835.5_1_21:30400234-30414894:+|nuORF'] 45903 12248 ISDYTEQHY True H1975_Epitope_Rep2 1154.48801807414 1154.4869299358602 52.193 2 -0.9327391991083914 0.2870742167226638 1.0 ['ENST00000558140.5_1_15:60802666-60820892:+|nuORF'] 89904 12724 RCLLRCYVP True PC9_epitope_Rep1 1121.58379054897 1121.5826899358601 53.817 2 -0.9327402628044101 0.2870742167226638 1.0 ['ENST00000262395.9_1_17:27076744-27076957:+|nuORF'] 126311 10380 VLIFFLVRFFL True NCI_RA007_Epitope_Rep2 1412.8584150937597 1412.85676490379 44.968 3 -0.9327576547593746 0.2870742167226638 1.0 ['ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 101095 15310 SLGISYDDPKK True PC9_epitope_Rep1 1221.62411762413 1221.6230299358601 63.711 2 -0.9327885884013452 0.2870742167226638 1.0 ['ENSG00000197140|ENST00000379907|ADAM32', 'ADAM32|p.K377Tfs*51|1|0.12|ENSG00000197140|chr8:39211218-39211219|-/TA|frameshift_variant'] 138757 19357 YISRPLSHCLH True PC9_epitope_Rep6 1324.6710253302401 1324.6699299358602 87.105 2 -0.9328036462975376 0.2870742167226638 1.0 ['ENST00000501122.2_1_11:65193981-65194080:+|nuORF'] 112573 15430 TLELFFHNF True PC9_epitope_Rep4 1166.5760452329 1166.5744049037899 67.285 3 -0.9328129568918414 0.2870742167226638 1.0 ['ENST00000318709.8_1_7:32627221-32627503:+|nuORF'] 86287 19860 QISDGLVEITW True PC9_epitope_Rep2 1259.63976768827 1259.6386699358602 81.783 2 -0.9328252753443393 0.2870742167226638 1.0 ['ENSG00000132357|ENST00000254691|CARD6'] 25010 2249 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 11.838 2 -0.9328467621725052 0.28708003277792954 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 87540 16491 QQKLTHNLF True PC9_epitope_Rep3 1127.60874234351 1127.60710490379 68.569 3 -0.9328596572363871 0.28708003277792954 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 110755 11828 TGGKWRAG True PC9_epitope_Rep4 831.4351350859898 831.4340299358599 53.264 2 -0.9329128109799893 0.2871170838966963 1.0 ['ENST00000395449.7_1_11:47187835-47198404:-|nuORF'] 121303 12513 VETQIYRP True PC9_epitope_Rep6 1004.5290950404799 1004.52798993586 59.562 2 -0.9329236768166148 0.28712681980825433 1.0 ['ENST00000429864.1_1_X:127575186-127575687:+|nuORF'] 56339 10726 LDDAVNPLHEN True PC9_epitope_Rep2 1235.57823006087 1235.57712993586 46.575 2 -0.9329882222615354 0.28717360428274885 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 129998 22437 VRWFLCREPWP True PC9_epitope_Rep2 1487.7496100041099 1487.74850993586 91.793 2 -0.9329952321569923 0.28717360428274885 1.0 ['nc|ENSG00000154118|Q8WXH2-2|JPH3'] 139388 20197 YLNGNYLII True PC9_epitope_Rep5 1081.58079626017 1081.5796899358602 82.733 2 -0.933011592172152 0.28717941714691503 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 65708 7532 LSAVVDLNGRY True H1975_Epitope_Rep2 1205.6404363946099 1205.6393299358601 33.922 2 -0.9330329290651189 0.28717941714691503 1.0 ['ENST00000465906.5_1_10:6157393-6157516:+|nuORF'] 92259 17913 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 74.415 2 -0.9330438918822315 0.28718522969355986 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 105356 24655 SRRFRGRH True PC9_epitope_Rep4 1070.5958266743799 1070.5947299358602 103.33 2 -0.9330816866555706 0.28718522969355986 1.0 ['ENSG00000145536|ENST00000274181|ADAMTS16', 'nc|ENSG00000145536|Q8TE57-2|ADAMTS16', 'ENST00000513709.1_1_5:5235169-5239274:+|nuORF'] 102609 13534 SLWIKRDVWMK True NCI_RA007_Epitope_Rep2 1460.7962258433597 1460.7951299358601 57.287 2 -0.9331327260118002 0.287194963743872 1.0 ['ENST00000421648.1_1_7:143104969-143112281:+|nuORF', 'ENST00000429289.5_1_7:143104932-143112281:+|nuORF'] 15384 10984 EAHRFHFDA True NCI_RA007_Epitope_Rep2 1128.5100909314 1128.5089899358602 47.333 2 -0.9331786014975753 0.2872183531339615 1.0 ['ENSG00000129636|ENST00000320640|ITFG1', 'ENST00000567957.1_1_16:47189632-47271941:-|nuORF'] 79322 14340 PARHPWAL True PC9_epitope_Rep4 946.5137197598599 946.51262993586 63.061 2 -0.9332040182785152 0.28722416429975967 1.0 ['ENST00000539264.5_1_12:133136796-133146679:+|nuORF'] 112946 25117 TLLLLLLL True PC9_epitope_Rep1 910.64669099202 910.64558993586 101.5 2 -0.933222419298521 0.28722416429975967 1.0 ['CON__ENSEMBL:ENSBTAP00000024146', 'nc|ENSG00000161911|Q86YW5-2|TREML1', 'nc|ENSG00000161911|Q86YW5-3|TREML1', 'ENSG00000161911|ENST00000426005|TREML1', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT', 'CON__P50448', 'ENSG00000173662|ENST00000333172|TAS1R1', 'nc|ENSG00000173662|Q7RTX1-2|TAS1R1'] 64203 12777 LPGLEKKP True PC9_epitope_Rep2 880.5382031721999 880.53710993586 54.451 2 -0.9332632203407788 0.2872475523329647 1.0 ['CECR2|p.E962K|1|0.53|ENSG00000099954|chr22:17542967-17542967|G/A|missense_variant'] 124151 14670 VGSSCTSC True NCI_RA007_Epitope_Rep5 742.2625755679001 742.2620249679301 63.096 1 -0.9333281562249834 0.2872572848676844 1.0 ['ENST00000369936.2_1_1:109730792-109745631:+|nuORF', 'ENST00000369938.5_1_1:109730226-109745631:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-3|ELAPOR1', 'ENST00000527996.5_1_1:109656894-109745573:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-2|ELAPOR1', 'nc|ENSG00000116299|Q6UXG2-4|ELAPOR1', 'ENSG00000116299|ENST00000369939|ELAPOR1'] 57718 18407 LEELEEWGNPS True PC9_epitope_Rep5 1301.57756135453 1301.5764699358601 75.823 2 -0.9333663235838126 0.2872609117096946 1.0 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 24992 17076 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 71.293 2 -0.9334661120751407 0.2872609117096946 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79168 16045 PAMTPSKEG True PC9_epitope_Rep3 916.4324177743199 916.43132993586 66.868 2 -0.9334696179669512 0.2872609117096946 1.0 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000498066.1_1_2:102484451-102486985:+|nuORF'] 126752 25713 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 103.95 3 -0.9334962914094005 0.2872609117096946 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 72312 20480 MIGFSCGHFV True PC9_epitope_Rep5 1096.4834078013598 1096.48230993586 83.815 2 -0.9335630330934421 0.2872609117096946 1.0 ['ENSG00000157796|ENST00000399820|WDR19', 'WDR19|p.H891Tfs*26|1|0.25|ENSG00000157796|chr4:39245391-39245391|C/-|frameshift_variant', 'nc|ENSG00000157796|Q8NEZ3-2|WDR19', 'WDR19|p.I245F|1|0.14|ENSG00000157796|chr4:39205579-39205579|A/T|missense_variant', 'ENST00000512448.1_1_4:39201144-39207357:+|nuORF'] 81213 19942 PKGSSKVKRRV True NCI_RA007_Epitope_Rep2 1240.77278797684 1240.7716899358602 82.571 2 -0.9335631387589016 0.2872609117096946 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 114959 23779 TQVRLYRIR True H1975_Epitope_Rep3 1203.7200241279897 1203.71836490379 99.17 3 -0.9335841193430372 0.2872609117096946 1.0 ['JAK3|p.L98R|1|0.36|ENSG00000105639|chr19:17843792-17843792|A/C|missense_variant'] 133247 1090 VVTKEKLLLE True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 5.7682 3 -0.9335995565000401 0.2872609117096946 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 119455 25278 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 104.76 1 -0.9336092248998784 0.2872609117096946 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 45788 11965 ISCLTVLVFY True H1975_Epitope_Rep1 1156.620218544 1156.6191299358602 51.028 2 -0.9336449967634082 0.2872609117096946 1.0 ['nc|ENSG00000101204|P43681-2|CHRNA4', 'ENSG00000101204|ENST00000370263|CHRNA4', 'nc|ENSG00000120903|Q15822-2|CHRNA2', 'ENSG00000120903|ENST00000407991|CHRNA2'] 12467 9228 DIYRQRSR True NCI_RA007_Epitope_Rep3 1092.57883919756 1092.57774993586 43.394 2 -0.9336598706980036 0.2872609117096946 1.0 ['nc|ENSG00000114378|Q12794-4|HYAL1', 'nc|ENSG00000114378|Q12794-7|HYAL1', 'nc|ENSG00000114378|Q12794-2|HYAL1', 'ENSG00000114378|ENST00000395144|HYAL1'] 56066 7085 LATEPPPG True PC9_epitope_Rep5 780.4017692690398 780.40066993586 32.218 2 -0.9337003500607959 0.2872609117096946 1.0 ['ENST00000460852.1_1_1:202302426-202304891:-|nuORF', 'ENST00000487227.5_1_1:202302298-202304891:-|nuORF', 'ENSG00000077152|ENST00000646651|UBE2T'] 4223 6911 AIDAEEFEKNW True NCI_RA007_Epitope_Rep2 1350.6091958359798 1350.60808993586 31.503 2 -0.9337210306792758 0.2872609117096946 1.0 ['TTC21B|p.S1199N|1|0.24|ENSG00000123607|chr2:165883882-165883882|C/T|missense_variant'] 45702 10274 IRMCPYYEEWP True NCI_RA007_Epitope_Rep2 1485.64209327073 1485.64098993586 44.554 2 -0.9337727362776733 0.28727064220183485 1.0 ['ENSG00000176571|ENST00000518476|CNBD1'] 92260 17998 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 74.751 2 -0.9338324477998144 0.2873076765553113 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 111615 9934 TIDNSKIV True NCI_RA007_Epitope_Rep3 888.4916469026 888.49054993586 46.158 2 -0.9338631762184645 0.2873095615136788 1.0 ['CON__P19001'] 6047 6680 APLGISEKS True NCI_RA007_Epitope_Rep5 900.4916469026 900.49054993586 32.363 2 -0.9338755730395465 0.2873095615136788 1.0 ['IL4R|p.S783L|1|0.16|ENSG00000077238|chr16:27363700-27363700|C/T|missense_variant'] 59702 11537 LGASGRCG True NCI_RA007_Epitope_Rep1 719.33845781983 719.3379049679301 48.844 1 -0.9338767503431328 0.2873095615136788 1.0 ['ENST00000379942.4_1_X:18970652-19002067:-|nuORF'] 130493 17446 VSPRVGVR True NCI_RA007_Epitope_Rep3 868.5242844435598 868.52318993586 76.544 2 -0.9339070754734129 0.28731929067751494 1.0 ['ENST00000531214.5_1_11:797830-797989:-|nuORF'] 20846 8561 EQKELLSNW True PC9_epitope_Rep5 1145.57168812845 1145.5700549037902 37.872 3 -0.933943684032817 0.2873387482083134 1.0 ['ENST00000449421.6_1_17:73205928-73222855:+|nuORF', 'ENST00000583948.5_1_17:73201841-73222120:+|nuORF', 'nc|ENSG00000125450|Q9BW27-3|NUP85', 'ENSG00000125450|ENST00000245544|NUP85', 'ENST00000577561.1_1_17:73214398-73221993:+|nuORF', 'nc|ENSG00000125450|Q9BW27-2|NUP85', 'ENST00000581104.5_1_17:73208151-73231006:+|nuORF'] 16332 9274 EEHKPVAVP True PC9_epitope_Rep3 1004.5290950404798 1004.52798993586 40.615 2 -0.9339711419737368 0.2873387482083134 1.0 ['UBN1|p.Q794Kfs*51|1|0.07|ENSG00000118900|chr16:4874784-4874784|G/-|frameshift_variant', 'nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1', 'ENST00000587027.1_1_16:4909049-4918847:+|nuORF'] 29928 17814 FVYGEPREL True PC9_epitope_Rep2 1108.5553097883198 1108.5542099358602 73.814 2 -0.9340440623405423 0.28738550582196926 1.0 ['ENSG00000046774|ENST00000247452|MAGEC2'] 74696 12668 NGSQFFITTV True PC9_epitope_Rep4 1112.55022440788 1112.54912993586 56.573 2 -0.9340441733582273 0.28738550582196926 1.0 ['ENSG00000171497|ENST00000307720|PPID', 'ENSG00000166794|ENST00000300026|PPIB'] 42763 19106 IELYRKLLN True PC9_epitope_Rep1 1160.6917436914798 1160.69008490379 78.28 3 -0.9341003747634667 0.28743618444401975 1.0 ['ENSG00000197275|ENST00000336148|RAD54B', 'RAD54B|p.D840Gfs*26|1|0.1|ENSG00000197275|chr8:94372384-94372385|-/ATAAC|frameshift_variant'] 18629 8343 EKVIQYQKQLQ True NCI_RA007_Epitope_Rep1 1403.7772642205898 1403.77561490379 36.452 3 -0.9341759695020725 0.28746928746928746 1.0 ['nc|ENSG00000061337|Q9Y250-3|LZTS1', 'nc|ENSG00000061337|Q9Y250-2|LZTS1', 'ENSG00000061337|ENST00000381569|LZTS1', 'nc|ENSG00000061337|Q9Y250-4|LZTS1'] 131268 14451 VTFNLYHFL True PC9_epitope_Rep1 1152.5967806774802 1152.59512490379 60.408 3 -0.9341838979888144 0.28746928746928746 1.0 ['ENSG00000070269|ENST00000261556|TMEM260'] 482 12457 AAMLDTVVFK True NCI_RA007_Epitope_Rep4 1093.58416738845 1093.58306993586 54.924 2 -0.9342573676033394 0.28747508940514865 1.0 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 129916 19494 VRSVILQGSG True NCI_RA007_Epitope_Rep4 1014.5821932424999 1014.58108993586 84.247 2 -0.9342573841015677 0.28747508940514865 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 102149 10723 SLRRDPDLR True NCI_RA007_Epitope_Rep1 1126.6207040095398 1126.6196099358601 45.702 2 -0.9343596127243842 0.2874945402926403 1.0 ['nc|ENSG00000073711|Q06190-2|PPP2R3A'] 37214 11474 GVREMREAFTV True PC9_epitope_Rep6 1293.6499555324897 1293.64831490379 55.201 3 -0.9343740849544492 0.2874945402926403 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 47561 5759 IVTTSNNHI True PC9_epitope_Rep5 997.5192586327701 997.51816993586 27.146 2 -0.9344115533804489 0.28751006592326694 1.0 ['nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'ENST00000442459.2_1_1:16342077-16343748:-|nuORF'] 24995 17457 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 72.854 2 -0.9344262578504453 0.28751006592326694 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57977 12150 LEGTYTSHWRL True H1975_Epitope_Rep3 1361.67279915205 1361.67170993586 51.904 2 -0.9344591062939733 0.28751006592326694 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 142886 14335 YYTQELTKPNI True NCI_RA007_Epitope_Rep5 1368.6925315371195 1368.69142993586 61.83 2 -0.9345320245394564 0.28753343888191296 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 123250 17933 VGLIHMLTHL True PC9_epitope_Rep3 1132.64268532408 1132.64104490379 74.183 3 -0.934547147269074 0.287556811202555 1.0 ['ENST00000524832.5_1_11:882499-902261:-|nuORF', 'ENST00000526714.5_1_11:870485-904855:-|nuORF', 'ENSG00000177830|ENST00000323578|CHID1', 'nc|ENSG00000177830|Q9BWS9-2|CHID1'] 117560 11228 TVSIRVRPD True PC9_epitope_Rep1 1041.59309227937 1041.59198993586 48.068 2 -0.9346435546120111 0.28757625800111913 1.0 ['ENST00000478515.1_1_3:4856448-4856586:+|nuORF'] 56372 8521 LDDRNTFRR True H1975_Epitope_Rep3 1191.61086760183 1191.6097699358602 37.762 2 -0.9346581433550895 0.28757625800111913 1.0 ['TP53|p.H214R|1|0.61|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant'] 92261 18088 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 75.111 2 -0.9346773291400821 0.28761907361410594 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 132044 7754 VTTDFLFEK True NCI_RA007_Epitope_Rep5 1098.55972646242 1098.5586299358602 36.524 2 -0.9347293634205847 0.28761907361410594 1.0 ['ENSG00000164100|ENST00000296499|NDST3'] 52486 13913 KKVVQQLQLE True NCI_RA007_Epitope_Rep2 1211.7237720957498 1211.72266993586 58.772 2 -0.934731409824814 0.28761907361410594 1.0 ['nc|ENSG00000133136|A0A804HLA8|GNG5B'] 66444 15709 LSGQKLFIP True PC9_epitope_Rep2 1001.5909670210498 1001.58986993586 65.699 2 -0.9347554446379733 0.28762487035318524 1.0 ['ENSG00000170848|ENST00000187910|PSG6', 'nc|ENSG00000170848|Q00889|PSG6', 'PSG3|p.Q383L|1|0.18|ENSG00000221826|chr19:42729218-42729218|T/A|missense_variant', 'PSG11|p.Q290K|1|0.21|ENSG00000243130|chr19:43015212-43015212|G/T|missense_variant', 'nc|ENSG00000243130|Q9UQ72-2|PSG11', 'ENST00000599753.1_2_19:43406566-43412082:-|nuORF', 'ENSG00000221826|ENST00000327495|PSG3', 'nc|ENSG00000124467|Q9UQ74-2|PSG8', 'nc|ENSG00000124467|Q9UQ74-3|PSG8', 'ENSG00000124467|ENST00000306511|PSG8', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11'] 66071 9382 LSEIMEKGQ True H1975_Epitope_Rep1 1033.51139637101 1033.51028993586 40.998 2 -0.9347702110226243 0.28762487035318524 1.0 ['ENSG00000106992|ENST00000644144|AK1'] 80867 9984 PHSVSVQCVP True PC9_epitope_Rep5 1051.5120650773501 1051.5109699358602 43.38 2 -0.9348907135133212 0.28774376680268027 1.0 ['ENST00000497410.5_1_5:863966-864239:-|nuORF'] 105757 11485 SSGERWIRY True PC9_epitope_Rep5 1152.5676058075198 1152.56650993586 49.175 2 -0.9349038593506296 0.2877671333824613 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 41857 20007 IAYEFNPELV True PC9_epitope_Rep4 1193.59684024713 1193.59574993586 85.091 2 -0.934976842625674 0.2877904993244995 1.0 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 25021 13656 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 57.131 2 -0.935058015923334 0.287798155122537 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 9215 10772 AVNEKGRSDP True H1975_Epitope_Rep3 1071.53088594563 1071.5297899358602 46.515 2 -0.9350672492977558 0.287798155122537 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 109369 3694 TCRGLFVLCQY True H1975_Epitope_Rep1 1301.6260492837698 1301.62441490379 18.685 3 -0.935079881422255 0.287798155122537 1.0 ['ENSG00000183813|ENST00000330953|CCR4'] 20613 6226 EPTPSDSHLSP True NCI_RA007_Epitope_Rep2 1165.52513185885 1165.5240299358602 28.824 2 -0.9351025603361227 0.287798155122537 1.0 ['ENST00000532786.2_1_11:62430524-62432598:-|nuORF'] 124649 11498 VGWWGPAP True H1975_Epitope_Rep2 868.4231734199598 868.42206993586 49.284 2 -0.9351060211440494 0.287798155122537 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.G1527Wfs*20|1|0.85|ENSG00000105429|chr19:42356406-42356407|-/T|frameshift_variant'] 137335 16346 YDIWHRRHDYW True NCI_RA007_Epitope_Rep2 1645.75384343741 1645.75274993586 68.31 2 -0.9351789656417289 0.28781759135441964 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 47259 11849 IVCVPSYLELW True NCI_RA007_Epitope_Rep2 1320.67879604928 1320.6776899358601 50.691 2 -0.9352109905398716 0.28781759135441964 1.0 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS'] 117636 23704 TVTITVLDI True PC9_epitope_Rep1 973.5695628701299 973.56846993586 95.972 2 -0.9352698152643818 0.2878545990421221 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 61772 6402 LLALHSAA True PC9_epitope_Rep1 794.4650382319401 794.46394993586 29.433 2 -0.9353420761340643 0.28790132216294395 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 25201 21209 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 94.429 2 -0.9353487058504727 0.28790132216294395 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 11227 4402 DEDYEEVVEYY True H1975_Epitope_Rep3 1451.56163650687 1451.5605299358601 22.053 2 -0.9354556670556531 0.28792468276708966 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant', 'NEB|p.D1129Rfs*3|1|0.2|ENSG00000183091|chr2:151678058-151678059|-/T|frameshift_variant', 'NEB|p.D542Ifs*15|1|0.43|ENSG00000183091|chr2:151695629-151695629|A/-|frameshift_variant'] 36284 15107 GVDYTCEC True PC9_epitope_Rep3 888.29935499944 888.29824993586 63.247 2 -0.9354969487580644 0.28794804273375996 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'ENST00000554284.1_1_14:52495365-52507549:-|nuORF'] 81212 19778 PKGSSKVKRRV True H1975_Epitope_Rep2 1240.77278797684 1240.7716899358602 82.052 2 -0.935510501178771 0.28795775800905965 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 121278 19088 VETLEQYKFVY True H1975_Epitope_Rep3 1417.71293262853 1417.7118299358601 80.04 2 -0.9355432079090449 0.28797718776434633 1.0 ['ENSG00000196090|ENST00000373187|PTPRT', 'nc|ENSG00000196090|O14522-1|PTPRT'] 63124 12006 LLRGLWQRWRR True H1975_Epitope_Rep1 1538.9058678350598 1538.9042249037902 51.19 3 -0.9355476490255307 0.28797718776434633 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 44488 21219 ILLFRRPLPK True PC9_epitope_Rep6 1251.8179472641098 1251.81631490379 94.466 3 -0.9355845775220732 0.28797904416278974 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 141662 19179 YTSYPMHDFY True PC9_epitope_Rep1 1322.52777471114 1322.52613490379 78.567 3 -0.9356014342352105 0.28797904416278974 1.0 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 142056 3520 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 17.824 3 -0.9356140023213032 0.28797904416278974 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 88499 8443 QSVGRPSNIVP True H1975_Epitope_Rep2 1152.6251206836398 1152.6234749037899 37.426 3 -0.9356299745431305 0.2879887582198696 1.0 ['ZNF584|p.F363Lfs*87|1|0.53|ENSG00000171574|chr19:58417607-58417607|C/-|frameshift_variant'] 100468 11350 SLALPTSSLYR True H1975_Epitope_Rep2 1206.66083748602 1206.6597499358602 48.706 2 -0.93565735908398 0.2879961806029191 1.0 ['TRPV5|p.S689Y|1|0.07|ENSG00000127412|chr7:142908638-142908638|G/T|missense_variant'] 23426 12287 EVTDKYFH True H1975_Epitope_Rep1 1037.48181049489 1037.4807099358602 52.286 2 -0.9356728245022005 0.2879961806029191 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.P3771S|1|0.1|ENSG00000138759|chr4:78539306-78539306|C/T|missense_variant'] 106243 3530 STEPPYSQK True NCI_RA007_Epitope_Rep2 1035.48728979815 1035.48618993586 18.382 2 -0.9357133234326751 0.2879961806029191 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000401075.3_1_1:31961199-31961370:-|nuORF', 'ENST00000443590.1_1_2:107314616-107314670:-|nuORF'] 25152 17874 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 75.548 2 -0.935716183048409 0.2879961806029191 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 124550 16297 VGVPTRAR True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50808496793 70.678 1 -0.9357509026901353 0.2879961806029191 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 118855 10805 VAASRTQVQK True PC9_epitope_Rep1 1086.6145559999397 1086.6134499358602 46.448 2 -0.9358122913543738 0.2879961806029191 1.0 ['ENSG00000161036|ENST00000292616|LRWD1', 'ENST00000473880.5_1_7:102106264-102108393:+|nuORF'] 116637 13617 TVAPKHHVP True PC9_epitope_Rep2 984.5504991914 984.54940993586 57.67 2 -0.9358307624513208 0.2879961806029191 1.0 ['ENSG00000165591|ENST00000374900|FAAH2'] 132597 4511 VVEYECRPGYR True NCI_RA007_Epitope_Rep2 1369.6448701520499 1369.64323490379 22.179 3 -0.9358342896368551 0.2879961806029191 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 42555 18575 IEETEQSKL True PC9_epitope_Rep4 1075.53971929383 1075.5386299358602 79.525 2 -0.9358382125570344 0.2879961806029191 1.0 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000515226.5_1_5:71516738-71522904:-|nuORF'] 82860 1785 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 10.055 3 -0.9358455622915889 0.2879961806029191 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 56785 15378 LDMCSSHP True PC9_epitope_Rep3 888.3469738982001 888.34586993586 64.307 2 -0.9358476974702475 0.2879961806029191 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 25023 13992 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 58.45 2 -0.9358693114246962 0.2879961806029191 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 116646 5060 TVARSPVAP True PC9_epitope_Rep6 896.5079656730799 896.50686993586 27.106 2 -0.9358727337463131 0.2880195332214811 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 35560 8366 GSVRLLAEYE True PC9_epitope_Rep6 1135.5873381925896 1135.58569490379 41.836 3 -0.935904003380853 0.2880428852029681 1.0 ['ENSG00000183186|ENST00000332235|C2CD4C'] 111592 4610 TIDDKVGAA True NCI_RA007_Epitope_Rep3 888.4552613938798 888.45416993586 25.048 2 -0.9359429181894628 0.2880486673759446 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 11072 14823 DAWKRPDAL True PC9_epitope_Rep5 1070.55089311422 1070.5497899358602 62.016 2 -0.9359787692849219 0.2880486673759446 1.0 ['ENSG00000104953|ENST00000246112|TLE6', 'ENST00000497878.5_1_19:2988043-2994999:+|nuORF', 'nc|ENSG00000104953|Q9H808-2|TLE6'] 85634 12021 QGLDGKPII True PC9_epitope_Rep5 939.5389314481899 939.53782993586 51.234 2 -0.9360138838191663 0.28805052034316736 1.0 ['MYPN|p.Y422C|1|0.12|ENSG00000138347|chr10:68150059-68150059|A/G|missense_variant', 'nc|ENSG00000138347|Q86TC9-2|MYPN', 'ENSG00000138347|ENST00000358913|MYPN'] 90506 8677 RELHCPDR True H1975_Epitope_Rep1 1024.4872473118398 1024.48614993586 38.305 2 -0.9360405562355778 0.28805052034316736 1.0 ['nc|ENSG00000130244|Q17RN3-2|FAM98C', 'ENSG00000130244|ENST00000252530|FAM98C'] 58179 4979 LEKWKMENDRP True NCI_RA007_Epitope_Rep1 1444.7132840650397 1444.7116349037901 23.451 3 -0.9360412525954276 0.28805052034316736 1.0 ['ZNF474|p.L254P|1|0.22|ENSG00000164185|chr5:122152751-122152751|T/C|missense_variant'] 33741 20271 GLIRCQDFL True PC9_epitope_Rep1 1063.54845058607 1063.5473499358602 82.8 2 -0.9360834133244169 0.2880699409430025 1.0 ['ENSG00000062370|ENST00000354340|ZNF112', 'nc|ENSG00000062370|Q9UJU3|ZNF112'] 133370 23998 VVVGVGLIVG True NCI_RA007_Epitope_Rep3 910.5851533646199 910.58404993586 103.96 2 -0.936084621032096 0.2880699409430025 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 56774 17280 LDLVFNFY True H1975_Epitope_Rep2 1029.51713337445 1029.5160299358602 71.758 2 -0.9361549179358366 0.28810692853246045 1.0 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 18968 5403 ELELEASWP True NCI_RA007_Epitope_Rep2 1072.50769088956 1072.5065899358601 25.636 2 -0.9362729168395616 0.28818483108522797 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ZZEF1|p.A2126Qfs*4|1|0.51|ENSG00000074755|chr17:4034223-4034223|C/-|frameshift_variant', 'ENST00000570365.1_1_17:3970518-3976036:-|nuORF'] 122717 17824 VGGHCRGP True PC9_epitope_Rep1 781.3653412740099 781.36424993586 73.353 2 -0.9362999142317202 0.2881906086766772 1.0 ['ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 21838 9292 ESASFAAV True H1975_Epitope_Rep2 780.3653837603199 780.36483496793 40.7 1 -0.9363365134285362 0.2881906086766772 1.0 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 117940 6126 TWWPQLWHCAQ True H1975_Epitope_Rep1 1454.6553752661 1454.6542699358602 28.633 2 -0.9363841012545021 0.288200316403906 1.0 ['ENST00000561704.1_1_16:66914448-66914508:+|nuORF'] 25008 1725 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 9.133 2 -0.9364396502532674 0.2882100238663485 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 76697 5485 NQSYQESHCF True NCI_RA007_Epitope_Rep4 1241.47713612061 1241.4760299358602 27.683 2 -0.9364798816090759 0.28821186995417847 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 62483 13943 LLIGVGPEGI True PC9_epitope_Rep4 966.5749826037398 966.57388993586 61.536 2 -0.9364884982766423 0.28821186995417847 1.0 ['ENSG00000007944|ENST00000356840|MYLIP', 'nc|ENSG00000007944|Q8WY64-2|MYLIP'] 131339 9888 VTGMELEFKR True NCI_RA007_Epitope_Rep2 1208.6223438023198 1208.62124993586 43.09 2 -0.9364998371449126 0.28821186995417847 1.0 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 15422 5070 EAKSIPLECP True H1975_Epitope_Rep3 1085.5426964992898 1085.5415899358602 24.619 2 -0.936508160153747 0.2882137158909602 1.0 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 80531 13280 PGPIDNTK True H1975_Epitope_Rep3 840.43413202648 840.4335849679301 56.338 1 -0.936510590270771 0.2882137158909602 1.0 ['nc|ENSG00000077254|Q8TEY7|USP33', 'ENST00000533928.1_1_1:78163515-78167102:-|nuORF', 'ENSG00000077254|ENST00000370794|USP33'] 82859 1722 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 9.701 3 -0.936521767907527 0.2882137158909602 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 20807 10560 EQIGTQVIHK True H1975_Epitope_Rep3 1151.62987171091 1151.6287699358602 45.686 2 -0.9365603511250137 0.2882234222440408 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 42513 20218 IEELRVPSL True PC9_epitope_Rep1 1054.60225998074 1054.60116993586 82.599 2 -0.9365935174625178 0.2882389036612804 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2'] 81352 14812 PLCNLSDVPP True H1975_Epitope_Rep2 1053.51648175145 1053.5153899358602 62.132 2 -0.9365941280443235 0.2882389036612804 1.0 ['ENST00000560489.2_1_15:49658263-49658881:-|nuORF'] 126078 20659 VLEKFFET True PC9_epitope_Rep4 1011.5276980581499 1011.52660993586 87.622 2 -0.9366146607694983 0.2882389036612804 1.0 ['ENSG00000180182|ENST00000324817|MED14'] 13546 12733 DPANEKLLTVF True H1975_Epitope_Rep1 1245.6605031328502 1245.6594099358601 54.037 2 -0.9366638270708317 0.28824860914148576 1.0 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF', 'ENST00000503745.1_1_4:99273670-99308609:+|nuORF', 'ENST00000511379.5_1_4:99182716-99300325:+|nuORF'] 83222 7650 PSVPIQDPE True PC9_epitope_Rep5 980.48147614172 980.48036993586 34.371 2 -0.9367050048420112 0.28825045337405747 1.0 ['TET3|p.K1103Rfs*79|1|0.42|ENSG00000187605|chr2:74099315-74099315|A/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 18823 18751 ELDLRGYKIP True PC9_epitope_Rep3 1202.66592286646 1202.66482993586 77.347 2 -0.9367325771905027 0.28825045337405747 1.0 ['ENST00000395613.2_1_22:51193627-51193861:-|nuORF', 'ENST00000558020.1_1_15:101828356-101835383:-|nuORF', 'ENST00000560856.5_1_15:101827905-101835383:-|nuORF', 'ENST00000558036.5_1_15:101827046-101835383:-|nuORF', 'ENSG00000131876|ENST00000254193|SNRPA1'] 62657 14627 LLLGVENIP True PC9_epitope_Rep2 966.57498260374 966.57388993586 61.53 2 -0.9367351708966093 0.28825045337405747 1.0 ['ENST00000604516.1_1_6:79943958-79944054:+|nuORF'] 23440 7021 EVTEVLLD True NCI_RA007_Epitope_Rep3 916.4753281321199 916.47422993586 34.733 2 -0.9368198946906631 0.28828742841559857 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1'] 68738 7450 LTLASLPR True NCI_RA007_Epitope_Rep5 869.53345214493 869.53234993586 35.336 2 -0.9368528959137504 0.2882971325725038 1.0 ['nc|ENSG00000285292|Q9UG63-2|ABCF2'] 30813 7868 GAPAETAVAA True PC9_epitope_Rep2 856.4290466460399 856.4279499358599 35.631 2 -0.9369235509174912 0.28829897469458987 1.0 ['ENST00000573331.5_1_17:7297739-7306647:-|nuORF'] 101365 6256 SLITVSAAK True PC9_epitope_Rep4 888.5280324113199 888.52692993586 31.113 2 -0.9369317655272644 0.28829897469458987 1.0 ['ENST00000474863.5_1_1:222885158-222885545:-|nuORF'] 142053 3314 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 16.811 3 -0.9369595090221582 0.28829897469458987 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 110134 12575 TEMRVISL True PC9_epitope_Rep3 947.5110024481899 947.50990993586 53.392 2 -0.9370401714138219 0.2883086781648374 1.0 ['ENSG00000165633|ENST00000332853|VSTM4'] 49799 24584 KHKEKIKQKEK True PC9_epitope_Rep4 1422.8670822845 1422.8659899358602 103.05 2 -0.9370596867323042 0.28833201537916175 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 84354 5386 PYYFHEPP True H1975_Epitope_Rep3 1048.46543215476 1048.4643299358602 25.784 2 -0.9370845082178572 0.28834171813434767 1.0 ['ENSG00000178607|ENST00000433197|ERN1'] 133109 4512 VVQLLLKPVL True PC9_epitope_Rep2 1120.7583666993198 1120.7572699358602 22.716 2 -0.937094569861752 0.28835142062496594 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 109116 5036 TALQAPAVPP True H1975_Epitope_Rep1 963.5389314481898 963.53782993586 24.44 2 -0.9371618634085778 0.2883590309871444 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 75349 11386 NISCKASQDI True PC9_epitope_Rep2 1077.5124590001699 1077.51136993586 49.118 2 -0.937189653084212 0.2883590309871444 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 82858 1658 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 9.334 3 -0.9372228059330896 0.2883590309871444 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 140614 21022 YRRNFNYRRRR True H1975_Epitope_Rep1 1655.8981566856698 1655.8970499358602 87.312 2 -0.9372314712801441 0.2883590309871444 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 130305 15597 VSHRGKTL True NCI_RA007_Epitope_Rep3 896.5191990631199 896.51810993586 68.935 2 -0.9372676236059837 0.2883590309871444 1.0 ['ENSG00000108932|ENST00000580666|SLC16A6'] 55822 19757 LAPGEIDPL True PC9_epitope_Rep4 923.4963979298699 923.49530993586 84.119 2 -0.9372745966885168 0.28836480130870423 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 140037 18906 YQFGEIRTI True PC9_epitope_Rep1 1125.5818588893299 1125.5807699358602 77.507 2 -0.9372841962986207 0.28836480130870423 1.0 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 25007 1597 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 8.4601 2 -0.9373334226708442 0.2883705713156209 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 116797 5849 TVEDLQGK True NCI_RA007_Epitope_Rep3 888.4552613938798 888.45416993586 29.985 2 -0.9373900818703953 0.2883705713156209 1.0 ['ENST00000494249.5_1_9:140709863-140710166:+|nuORF'] 123133 8136 VGKPLNLD True NCI_RA007_Epitope_Rep4 854.48616759934 854.48506993586 38.085 2 -0.9374511459024687 0.28839390386869873 1.0 ['ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 115295 25536 TRGKGGGT True PC9_epitope_Rep2 732.3878505403999 732.38730496793 103.91 1 -0.9374840093428066 0.2884015102981067 1.0 ['ISM1|p.A400G|1|0.38|ENSG00000101230|chr20:13299263-13299263|C/G|missense_variant'] 16409 14695 EEKERERLAK True PC9_epitope_Rep1 1286.69426287262 1286.69260490379 61.345 3 -0.9374848618300788 0.2884015102981067 1.0 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 58641 10677 LEREEYLL True PC9_epitope_Rep3 1063.5549754351498 1063.5538699358601 46.014 2 -0.9374990453376648 0.2884015102981067 1.0 ['nc|ENSG00000031003|Q9NYF5-3|FAM13B', 'nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B'] 83103 12299 PSPLQREL True PC9_epitope_Rep5 938.5185303567799 938.51742993586 52.298 2 -0.937516003292463 0.2884015102981067 1.0 ['nc|ENSG00000138669|Q13237-2|PRKG2', 'ENSG00000138669|ENST00000264399|PRKG2'] 96056 23700 RYLRAQRP True PC9_epitope_Rep3 1058.6097454030198 1058.60864993586 96.448 2 -0.9375270500948103 0.2884015102981067 1.0 ['ENSG00000142235|ENST00000600059|LMTK3'] 83831 13707 PVLQTRPL True PC9_epitope_Rep3 922.5600012459399 922.55890993586 57.805 2 -0.9375858729840262 0.28842090915286583 1.0 ['nc|ENSG00000100106|Q9H2D6-6|TRIOBP'] 28243 18805 FRKKKREQ True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.6661699358601 81.354 2 -0.9376337517895126 0.28842090915286583 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 16207 15650 EEEEQKRQEKK True H1975_Epitope_Rep1 1459.7266851997094 1459.7255899358602 65.486 2 -0.9376405209236479 0.2884306081836273 1.0 ['ENSG00000169249|ENST00000307771|ZRSR2'] 18334 8785 EISRIPYP True H1975_Epitope_Rep2 973.5232813840498 973.52218993586 38.756 2 -0.9376770700782214 0.2884403069499911 1.0 ['ZNF624|p.A480Pfs*12|1|0.08|ENSG00000197566|chr17:16623449-16623449|T/-|frameshift_variant', 'ENSG00000197566|ENST00000311331|ZNF624', 'ENST00000579983.1_1_17:16534952-16537956:-|nuORF'] 57915 11116 LEGEVDHSF True NCI_RA007_Epitope_Rep4 1031.45598966987 1031.4548899358601 49.633 2 -0.9377155872333193 0.2884421425650811 1.0 ['nc|ENSG00000164323|Q9P2B7-2|CFAP97', 'ENSG00000164323|ENST00000458385|CFAP97'] 25142 58 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 0.34807 2 -0.9377329707413954 0.2884421425650811 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 48800 17102 KDPQEELVWEW True H1975_Epitope_Rep1 1457.6826951294097 1457.68158993586 71.21 2 -0.9377416876390712 0.2884421425650811 1.0 ['ENST00000512127.5_1_4:169552925-169589349:+|nuORF'] 119460 25734 VARKGGGL True NCI_RA007_Epitope_Rep5 756.4606215578398 756.46007496793 106.53 1 -0.9377632248228607 0.2884518406454866 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 28214 11412 FRERHHLSRHM True NCI_RA007_Epitope_Rep1 1504.7582176252001 1504.7571299358601 48.356 2 -0.9377844869084916 0.28845551058233504 1.0 ['ENSG00000152784|ENST00000415738|PRDM8', 'nc|ENSG00000265763|Q96MN9-2|ZNF488', 'ENSG00000265763|ENST00000585316|ZNF488'] 16267 6109 EEEYPLMIMRK True NCI_RA007_Epitope_Rep5 1437.6996081468499 1437.69850993586 30.179 2 -0.9377949487921532 0.28845551058233504 1.0 ['ENST00000489282.1_1_1:59158492-59165724:-|nuORF'] 127334 9026 VMLENYENVAK True H1975_Epitope_Rep1 1308.6383877892802 1308.63728993586 39.625 2 -0.937822229321882 0.28845551058233504 1.0 ['ENSG00000198028|ENST00000301480|ZNF560'] 29002 12442 FTEEYQKSLLE True H1975_Epitope_Rep1 1385.6714617393698 1385.6703699358602 52.895 2 -0.9378297629072989 0.28845551058233504 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 10278 5632 CCFHVQSLPCF True NCI_RA007_Epitope_Rep3 1282.52970637078 1282.52806490379 29.144 3 -0.9378736996094709 0.28845551058233504 1.0 ['ENST00000379441.7_1_12:56991800-56991959:-|nuORF'] 25155 1345 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 7.43 2 -0.9378744005931944 0.28845551058233504 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 136074 8325 WRKEDCQRFYR True H1975_Epitope_Rep1 1585.75721456569 1585.7561099358602 36.954 2 -0.9378984477681622 0.28847883561830523 1.0 ['nc|ENSG00000172113|O75414-3|NME6', 'nc|ENSG00000172113|O75414-2|NME6', 'ENSG00000172113|ENST00000442597|NME6'] 130306 16126 VSHRGKTL True NCI_RA007_Epitope_Rep4 896.5191990631199 896.51810993586 69.93 2 -0.9379531456894677 0.2884903654847238 1.0 ['ENSG00000108932|ENST00000580666|SLC16A6'] 4596 11047 AKQWFRWLWIR True PC9_epitope_Rep4 1588.87792175172 1588.87627490379 50.268 3 -0.9379656182428715 0.2884903654847238 1.0 ['ABCB1|p.L545Wfs*40|1|0.34|ENSG00000085563|chr7:87549440-87549440|G/-|frameshift_variant'] 41547 16484 HYRNKLRL True PC9_epitope_Rep4 1098.6410455312998 1098.6399499358602 71.376 2 -0.9379665888442161 0.2884903654847238 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L'] 15900 21418 EDKKVRVQ True PC9_epitope_Rep1 1000.5665431783598 1000.56544993586 87.221 2 -0.9380190839123941 0.2884903654847238 1.0 ['nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14', 'CDK14|p.E170Kfs*16|1|0.71|ENSG00000058091|chr7:90790615-90790615|G/-|frameshift_variant'] 70153 14601 LVPPQDVVNK True PC9_epitope_Rep5 1107.62880908175 1107.6277099358601 61.164 2 -0.9380245875775116 0.2885000613221046 1.0 ['ENSG00000063169|ENST00000594866|BICRA'] 37208 14752 GVRCAGGH True NCI_RA007_Epitope_Rep4 755.3496912098699 755.3491449679301 64.197 1 -0.9380429834891792 0.288509756895236 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B'] 102460 10292 SLVAEHLP True PC9_epitope_Rep5 864.4705175352 864.46942993586 44.575 2 -0.9380872121748488 0.28853307896709135 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF'] 12649 8573 DLDGSGDP True PC9_epitope_Rep2 774.30317742658 774.30208993586 38.337 2 -0.9381538568313077 0.2885485365454843 1.0 ['ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G178V|1|0.16|ENSG00000247746|chrX:55488407-55488407|C/A|missense_variant'] 13605 12565 DPGQLLLHSQH True PC9_epitope_Rep5 1243.63093434007 1243.62982993586 53.332 2 -0.9381671319675657 0.2885485365454843 1.0 ['ENST00000377991.8_1_9:35853199-35853710:+|nuORF'] 76698 5467 NQSYQESHCF True NCI_RA007_Epitope_Rep5 1241.47713612061 1241.4760299358602 27.715 2 -0.938204357216219 0.2885485365454843 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 6091 9618 APLSETGAP True PC9_epitope_Rep5 841.4181476091699 841.41704993586 41.96 2 -0.9382860984761215 0.2885679247853931 1.0 ['nc|ENSG00000156374|Q9BYE7-3|PCGF6', 'ENSG00000156374|ENST00000369847|PCGF6'] 127045 19731 VLSMEINIL True PC9_epitope_Rep6 1030.5732683515798 1030.57216993586 88.553 2 -0.9382926305117099 0.2885679247853931 1.0 ['ENSG00000147082|ENST00000376042|CCNB3', 'ENST00000487204.1_1_X:50085140-50094699:+|nuORF', 'nc|ENSG00000147082|Q8WWL7-2|CCNB3'] 13162 9592 DLRNSLTGFR True PC9_epitope_Rep5 1177.62036965637 1177.61926993586 41.856 2 -0.9383207344962189 0.288589140949656 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'LAMA3-ZNF521|1|fusion', 'LAMA3-ZNF521|2|fusion', 'ENSG00000198795|ENST00000361524|ZNF521', 'nc|ENSG00000102935|Q2M1K9-2|ZNF423', 'nc|ENSG00000102935|Q2M1K9|ZNF423', 'ENSG00000102935|ENST00000563137|ZNF423'] 76221 16185 NNVNKLLI True PC9_epitope_Rep4 926.5549158654999 926.55380993586 70.199 2 -0.9383506872022704 0.288589140949656 1.0 ['PLXNA2|p.Y1854Lfs*6|1|0.42|ENSG00000076356|chr1:208028034-208028038|GAGTA/-|frameshift_variant', 'ENSG00000076356|ENST00000367033|PLXNA2', 'nc|ENSG00000076356|O75051-2|PLXNA2'] 60743 17289 LHRPRITR True NCI_RA007_Epitope_Rep3 1047.6413798844699 1047.6402899358602 75.891 2 -0.9383670626044052 0.288589140949656 1.0 ['ENSG00000141384|ENST00000269142|TAF4B'] 22800 6164 EVAAVAVLMC True PC9_epitope_Rep1 1004.5034745395999 1004.50236993586 28.525 2 -0.938367376928119 0.288589140949656 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 79534 9690 PDAPPDTTV True H1975_Epitope_Rep2 911.4236269124301 911.42252993586 42.254 2 -0.9383754875531811 0.288589140949656 1.0 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 39664 11501 HLQKPYEIN True PC9_epitope_Rep2 1140.5927579262 1140.59110490379 49.562 3 -0.9383898657911603 0.2885949016989795 1.0 ['ENSG00000110367|ENST00000534980|DDX6'] 94840 6584 RSSRHQTLPER True H1975_Epitope_Rep1 1365.72254330913 1365.72088490379 30.385 3 -0.9383924836205583 0.2885949016989795 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'ATAD5|p.N1157Pfs*17|1|0.06|ENSG00000176208|chr17:30869507-30869508|-/CCTTT|frameshift_variant', 'nc|ENSG00000176208|Q96QE3-2|ATAD5', 'ATAD5|p.K970Nfs*32|1|0.2|ENSG00000176208|chr17:30858271-30858271|A/-|frameshift_variant'] 54607 23183 KYKWYLKKLVF True PC9_epitope_Rep4 1514.9013425348996 1514.89969490379 97.402 3 -0.938434549405951 0.2886045941306303 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 14853 15266 DVWPEHSI True PC9_epitope_Rep1 981.45559574705 981.45448993586 63.541 2 -0.9384915783701666 0.2886551587896293 1.0 ['nc|ENSG00000146757|Q03936-2|ZNF92', 'nc|ENSG00000146757|Q03936-3|ZNF92', 'ENSG00000146757|ENST00000328747|ZNF92'] 25027 15097 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 62.792 2 -0.9385400051827826 0.2886745412187845 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 91529 5154 RIESLEQEK True NCI_RA007_Epitope_Rep2 1130.59315184902 1130.5920499358601 24.667 2 -0.9385686372278179 0.2886745412187845 1.0 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 87491 7358 QQEQNLKQR True NCI_RA007_Epitope_Rep1 1170.6105332486597 1170.6094299358601 32.615 2 -0.938616353475854 0.28871147925124657 1.0 ['ENSG00000267909|ENST00000599174|CCDC177'] 128017 14616 VPIWWFWKLRH True NCI_RA007_Epitope_Rep2 1566.86120905842 1566.86010993586 61.519 2 -0.9387020754703794 0.2887248157582858 1.0 ['ENST00000460045.1_1_7:128034815-128035199:-|nuORF'] 46374 17265 ISRVECPL True PC9_epitope_Rep1 915.4847877003499 915.48368993586 71.228 2 -0.9387088685337196 0.2887248157582858 1.0 ['ENST00000554577.5_1_14:24791640-24799178:-|nuORF'] 119851 10469 VDESLFDWNVK True NCI_RA007_Epitope_Rep2 1350.6455813446998 1350.64448993586 45.315 2 -0.9387291919736117 0.2887248157582858 1.0 ['ENSG00000215218|ENST00000399816|UBE2QL1'] 29876 13134 FVTPLDGSV True NCI_RA007_Epitope_Rep5 933.4807478657299 933.47964993586 57.196 2 -0.9387513363298375 0.2887248157582858 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP', 'ENST00000535430.1_12:122612431-122612782:+|nuORF'] 120119 5795 VEAARRYVQFM True NCI_RA007_Epitope_Rep1 1368.6972400780799 1368.6961499358601 26.595 2 -0.938754908841884 0.2887248157582858 1.0 ['ENSG00000115850|ENST00000264162|LCT'] 775 15444 AAVRRPRS True NCI_RA007_Epitope_Rep5 911.54133149003 911.54022993586 66.108 2 -0.9387778999774998 0.2887248157582858 1.0 ['ENST00000330871.3_1_17:76355142-76356149:-|nuORF'] 46436 4932 ISSWRNDR True NCI_RA007_Epitope_Rep2 1032.5100909313999 1032.5089899358602 23.805 2 -0.9387892059435908 0.2887248157582858 1.0 ['nc|ENSG00000234414|P0DJD3-3|RBMY1A1', 'nc|ENSG00000226941|Q15415-2|RBMY1F', 'nc|ENSG00000244395|P0C7P1-2|RBMY1D', 'nc|ENSG00000234414|P0DJD3-2|RBMY1A1', 'nc|ENSG700|P0DJD4|RBMY1C', 'ENSG00000244395|ENST00000382680|RBMY1D', 'ENSG00000242875|ENST00000383020|RBMY1B', 'ENSG00000242389|ENST00000382659|RBMY1E', 'ENSG00000234414|ENST00000382707|RBMY1A1', 'ENSG00000226941|ENST00000250831|RBMY1J', 'ENSG00000169800|ENST00000303766|RBMY1F'] 38639 13054 HFKRYRYRRPG True NCI_RA007_Epitope_Rep4 1534.8381821980597 1534.8370899358601 57.312 2 -0.9388230025635944 0.2887441936494531 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN'] 42706 10912 IEKLRELECWK True H1975_Epitope_Rep3 1445.7700706651697 1445.76896993586 47.06 2 -0.9388240844606556 0.2887441936494531 1.0 ['ENSG00000137460|ENST00000511601|FHDC1'] 25327 8719 FDTENLEKI True NCI_RA007_Epitope_Rep5 1107.54480467427 1107.54427496793 40.202 1 -0.9389394641437269 0.28877719205045427 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 55291 6296 LADVLSAPVP True NCI_RA007_Epitope_Rep2 980.5542471591599 980.55314993586 29.095 2 -0.9389394780190344 0.28877719205045427 1.0 ['ENSG00000198837|ENST00000361217|DENND4B', 'ENST00000485359.1_1_1:153912533-153913115:-|nuORF'] 84493 23433 QALLFIKRM True PC9_epitope_Rep2 1118.66342076866 1118.66232993586 95.609 2 -0.9390465097350339 0.28884136540714306 1.0 ['ENSG00000125755|ENST00000245934|SYMPK'] 128616 5650 VPTYSKEEKD True PC9_epitope_Rep3 1194.5768330785397 1194.57517490379 26.809 3 -0.9390954714630699 0.28886467343185995 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|37|1|sense'] 83582 7624 PVARPQAMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 34.147 2 -0.9391209482176561 0.28888192751392655 1.0 ['ENST00000475589.1_1_15:43886371-43886566:+|nuORF', 'ENST00000481666.1_1_15:43886371-43886950:+|nuORF'] 115927 15410 TSGKKGGK True NCI_RA007_Epitope_Rep2 761.4395517600899 761.43844993586 64.643 2 -0.9391686357467133 0.28888192751392655 1.0 ['ENSG00000099284|ENST00000373255|MACROH2A2'] 7759 5805 ASQTSSSPAPK True NCI_RA007_Epitope_Rep2 1059.51965255559 1059.5185499358602 27.198 2 -0.9392050251080571 0.28888192751392655 1.0 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'nc|ENSG00000112576|P30281-4|CCND3'] 127139 22420 VLTTLERR True PC9_epitope_Rep3 986.58727862294 986.58618993586 91.516 2 -0.9392694297806796 0.28888192751392655 1.0 ['nc|ENSG00000176463|Q9UIG8-3|SLCO3A1', 'ENST00000553653.5_1_15:92397138-92694297:+|nuORF', 'nc|ENSG00000176463|Q9UIG8-2|SLCO3A1', 'ENSG00000176463|ENST00000318445|SLCO3A1'] 59123 19446 LEYLRQIFR True PC9_epitope_Rep2 1236.69789170108 1236.69625490379 80.178 3 -0.9393580559528957 0.28888192751392655 1.0 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-9|SMPD4', 'nc|ENSG00000136699|Q9NXE4-10|SMPD4', 'nc|ENSG00000136699|Q9NXE4-7|SMPD4', 'nc|ENSG00000136699|Q9NXE4-8|SMPD4', 'ENST00000438378.2_1_2:132275414-132277996:+|nuORF', 'ENST00000482171.5_1_2:130910130-130912221:-|nuORF', 'nc|ENSG00000136699|Q9NXE4-5|SMPD4'] 107362 12394 SVLHSLASN True PC9_epitope_Rep1 926.48214484806 926.48104993586 52.534 2 -0.9393739398227201 0.28888192751392655 1.0 ['nc|ENSG00000196503|Q6T311|ARL9', 'ENSG00000196503|ENST00000640821|ARL9'] 129917 21636 VRSVILQGSG True PC9_epitope_Rep6 1014.5821932424999 1014.58108993586 96.107 2 -0.9394070230456355 0.2888916128680777 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 129918 21655 VRSVILQGSG True PC9_epitope_Rep6 1014.5821932424999 1014.58108993586 96.18 2 -0.939419426432346 0.2888973632599695 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 107776 5280 SVSYDDWDYS True PC9_epitope_Rep5 1235.46186289595 1235.46022490379 25.325 3 -0.9394212799728819 0.2888973632599695 1.0 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'GRIN2A|p.F1234Sfs*51|1|0.28|ENSG00000183454|chr16:9763845-9763845|G/-|frameshift_variant', 'ENSG00000183454|ENST00000330684|GRIN2A'] 124705 7661 VGYTWIPML True PC9_epitope_Rep5 1078.55213898418 1078.5510499358602 34.413 2 -0.9394293199503178 0.28890704800817163 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 9040 11353 AVHEKVNIIPV True PC9_epitope_Rep6 1217.71320741205 1217.71156490379 54.713 3 -0.9394406432315143 0.2889127977446988 1.0 ['ENSG00000180096|ENST00000321367|SEPTIN1', 'ENST00000563957.6_1_16:30392441-30392549:-|nuORF'] 84547 4939 QARQPWRWKE True PC9_epitope_Rep3 1383.71600137671 1383.71434490379 24.091 3 -0.9395161655754398 0.2889127977446988 1.0 ['ENST00000552692.5_1_12:56122103-56122145:-|nuORF', 'ENST00000257857.8_1_12:56122103-56122892:-|nuORF'] 105420 22501 SRSSSKSG True PC9_epitope_Rep5 794.38824446322 794.38714993586 91.553 2 -0.9395483433123587 0.2889497194530697 1.0 ['ENSG00000114857|ENST00000232978|NKTR'] 30429 5994 GAESVTKEK True H1975_Epitope_Rep3 947.4923751785899 947.49126993586 28.069 2 -0.9395559451756463 0.2889515327314077 1.0 ['ENST00000528717.1_1_11:102323683-102332276:+|nuORF'] 118757 16276 TYYYELWWFWL True NCI_RA007_Epitope_Rep1 1668.7653025545596 1668.7642099358602 67.419 2 -0.9395730274757395 0.2889515327314077 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 70076 10093 LVNPVQEL True PC9_epitope_Rep5 910.51238234718 910.51128993586 43.805 2 -0.9395855522426054 0.2889515327314077 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1', 'ENST00000462441.1_1_2:63101526-63108832:+|nuORF'] 121420 13357 VEVTYYHK True PC9_epitope_Rep1 1037.51819600361 1037.5170899358602 56.237 2 -0.9396140067890532 0.2889748338598976 1.0 ['KCNH7|p.Y326Ffs*6|1|0.43|ENSG00000184611|chr2:162504576-162504594|ATCTTGTTAATGGTGCTGT/-|frameshift_variant', 'nc|ENSG00000184611|Q9NS40-2|KCNH7', 'KCNH7|p.S932Afs*21|1|0.16|ENSG00000184611|chr2:162384856-162384856|T/-|frameshift_variant', 'KCNH7|p.E1030Kfs*6|1|0.13|ENSG00000184611|chr2:162379896-162379896|C/-|frameshift_variant', 'ENSG00000184611|ENST00000332142|KCNH7'] 11208 5120 DECKVHKEGYN True H1975_Epitope_Rep2 1320.5768501618797 1320.57520490379 24.77 3 -0.9396515083946557 0.2889805812021679 1.0 ['ZNF208|p.W760Cfs*14|1|0.26|ENSG00000160321|chr19:21972754-21972754|C/-|frameshift_variant', 'nc|ENSG00000160321|O43345-2|ZNF208', 'ENSG00000160321|ENST00000397126|ZNF208', 'ZNF91|p.K369Nfs*4|1|0.06|ENSG00000167232|chr19:23361868-23361872|TTATC/-|frameshift_variant', 'ZNF91|p.H648Qfs*13|1|0.08|ENSG00000167232|chr19:23361034-23361035|TA/-|frameshift_variant', 'nc|ENSG00000167232|Q05481-2|ZNF91', 'ENSG00000167232|ENST00000300619|ZNF91', 'nc|ENSG00000188171|Q68DY1-2|ZNF626', 'ENSG00000188171|ENST00000601440|ZNF626', 'ENSG00000213967|ENST00000594466|ZNF726'] 76245 18424 NPFVSEPGAHP True H1975_Epitope_Rep3 1150.5407223533398 1150.5396299358601 77.234 2 -0.939668338522963 0.2889805812021679 1.0 ['ENSG00000143512|ENST00000343410|HHIPL2'] 12276 22898 DILIAGLIPD True PC9_epitope_Rep2 1038.5961119711399 1038.5950099358602 93.581 2 -0.93974955657809 0.2889823930716124 1.0 ['LILRB5|p.L365Afs*11|1|0.24|ENSG00000105609|chr19:54254898-54254899|-/G|frameshift_variant', 'nc|ENSG00000105609|O75023-2|LILRB5', 'nc|ENSG00000105609|O75023|LILRB5', 'ENSG00000105609|ENST00000449561|LILRB5'] 57717 4017 LEELEESRHK True H1975_Epitope_Rep3 1268.6360792901598 1268.6349899358602 20.576 2 -0.9397809899193955 0.2889823930716124 1.0 ['SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 45760 10379 ISAHPSSLV True PC9_epitope_Rep5 909.49198125577 909.49088993586 44.907 2 -0.9397850673787388 0.2889823930716124 1.0 ['nc|ENSG00000104970|Q9H7L2|KIR3DX1'] 59982 17061 LGHVVIEIS True PC9_epitope_Rep4 965.55458151233 965.55348993586 73.622 2 -0.939839006596133 0.289001756559866 1.0 ['BAIAP2L1|p.L75V|1|0.22|ENSG00000006453|chr7:98320290-98320290|G/C|missense_variant'] 84088 6408 PWLCAPAP True H1975_Epitope_Rep2 853.4156455113699 853.41509496793 29.572 1 -0.9398398648054836 0.289001756559866 1.0 ['ENST00000530134.5_1_1:32205534-32221699:-|nuORF'] 112828 18112 TLINKINNL True PC9_epitope_Rep6 1041.6182443980501 1041.6171499358602 82.303 2 -0.9398710434640826 0.28902111899347777 1.0 ['ENSG00000241127|ENST00000223273|YAE1'] 124408 6530 VGVENPAP True PC9_epitope_Rep3 781.3970182417698 781.39592993586 30.145 2 -0.939871077268283 0.28902111899347777 1.0 ['ENSG00000189325|ENST00000437635|BNIP5'] 67364 18061 LSSIHPSLP True PC9_epitope_Rep1 949.52328138405 949.52218993586 74.264 2 -0.9399404421534568 0.2890326094356321 1.0 ['ENST00000426654.6_1_16:69733899-69734280:+|nuORF'] 70393 18871 LVTGGYDYDV True PC9_epitope_Rep5 1100.50260550912 1100.5015099358602 77.607 2 -0.9399470408810995 0.2890326094356321 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 14469 19982 DTFALQTFL True PC9_epitope_Rep1 1054.5335117145798 1054.5324099358602 81.686 2 -0.9399560685782534 0.2890326094356321 1.0 ['ENST00000164305.9_1_15:55619826-55626172:+|nuORF'] 102237 13602 SLSFWGVDG True PC9_epitope_Rep5 966.4446967101798 966.44358993586 57.344 2 -0.939969572849127 0.2890326094356321 1.0 ['ENST00000474534.1_1_9:131798902-131809484:+|nuORF'] 124577 9269 VGVRVSCS True PC9_epitope_Rep3 805.4116227600899 805.41052993586 40.597 2 -0.9400267657495006 0.28903984644077485 1.0 ['ENST00000338244.5_1_20:4835185-4835350:-|nuORF'] 38674 10161 HFTYVVIGYG True NCI_RA007_Epitope_Rep5 1154.5760452328998 1154.5744049037899 45.718 3 -0.9401585030110536 0.28903984644077485 1.0 ['nc|ENSG00000237621|Q8NGU1|OR9A1P'] 56012 11743 LASLLPWHRR True NCI_RA007_Epitope_Rep1 1247.72510950843 1247.72400993586 49.655 2 -0.9401633814482164 0.28903984644077485 1.0 ['ENST00000439413.2_1_7:54850836-54872378:+|nuORF'] 49328 14178 KERRQREERRQ True H1975_Epitope_Rep1 1569.8560170901699 1569.8549299358601 59.711 2 -0.9401660943404252 0.28903984644077485 1.0 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'ENST00000490265.5_1_X:13771424-13787224:+|nuORF'] 64406 16727 LPLWLLWDSF True PC9_epitope_Rep5 1288.6855956818802 1288.68394490379 69.347 3 -0.9401709143362826 0.28903984644077485 1.0 ['ENST00000271375.6_1_1:168213838-168214108:+|nuORF'] 93990 24703 RRKKKRKKLCQ True H1975_Epitope_Rep2 1470.94053909162 1470.93889490379 101.58 3 -0.9401942083395943 0.28903984644077485 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A'] 41071 5858 HTM[Oxidation]AQIM[Oxidation]AEQ True NCI_RA007_Epitope_Rep2 1190.50599448162 1190.50488993586 27.405 2 -0.9402100153634803 0.28903984644077485 1.0 ['nc|ENSG00000125869|Q9UJQ1-2|LAMP5', 'ENSG00000125869|ENST00000246070|LAMP5'] 135578 5609 WKYLFCMMTSF True H1975_Epitope_Rep2 1455.6389224665897 1455.63782993586 26.577 2 -0.9402100404168364 0.28903984644077485 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|106|2|anti-sense'] 97548 4636 SEERLCLAA True PC9_epitope_Rep4 990.4804305958999 990.47932993586 24.351 2 -0.9402175726752839 0.28903984644077485 1.0 ['SVA_D_dup445|chr5:69514530-69516541:-|5.086170895852312|0.1334218778948128|5.25|538.0|21|2|sense'] 22518 13753 ETGTTEEHSL True PC9_epitope_Rep5 1102.4778473132599 1102.4767499358602 57.922 2 -0.9403280442726456 0.28903984644077485 1.0 ['nc|ENSG00000137478|O94868-3|FCHSD2', 'nc|ENSG00000137478|O94868-2|FCHSD2', 'ENSG00000137478|ENST00000409418|FCHSD2'] 44352 15980 ILEAESKPL True PC9_epitope_Rep5 998.56481184286 998.56370993586 66.458 2 -0.9403448502174451 0.28903984644077485 1.0 ['ENST00000582077.5_1_18:66382817-66385349:+|nuORF'] 139275 20887 YLIYLSQHTPV True PC9_epitope_Rep5 1332.7077876784401 1332.7061549037899 85.395 3 -0.9403623611565625 0.28903984644077485 1.0 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 3623 15079 AGPGFPQAVP True PC9_epitope_Rep3 939.4814165720697 939.48030993586 63.137 2 -0.9403853476643871 0.2890495248985815 1.0 ['ENSG00000106351|ENST00000300176|AGFG2'] 24996 19749 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 82.7 2 -0.9404823727150505 0.28905526817315547 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 45201 14753 IPRPETEEL True PC9_epitope_Rep5 1082.56078909158 1082.56027496793 61.747 1 -0.9404871352203134 0.28905526817315547 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF'] 59400 23358 LFLLWSKLT True PC9_epitope_Rep3 1119.66921734175 1119.6681299358602 95.125 2 -0.9405135721379063 0.2890567578603512 1.0 ['nc|ENSG00000078618|O43847-2|NRDC'] 31295 17772 GDIVMTQSPL True NCI_RA007_Epitope_Rep3 1059.52704643515 1059.5259499358601 77.921 2 -0.9405255669153851 0.2890567578603512 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 11202 8892 DEAM[Oxidation]RRLQERM[Oxidation] True H1975_Epitope_Rep3 1465.6765820473697 1465.67548993586 39.2 2 -0.9405277089113927 0.2890567578603512 1.0 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'ENST00000599652.5_1_19:49965164-49969478:+|nuORF'] 14687 4090 DVIIMMLDAT True H1975_Epitope_Rep2 1120.55081865484 1120.5497299358601 20.822 2 -0.9405864449226755 0.2890567578603512 1.0 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000582314.5_1_17:17997264-18003464:+|nuORF'] 36339 7501 GVEQNHQRA True PC9_epitope_Rep1 1037.5002545236898 1037.49914993586 33.67 2 -0.9405870620312644 0.2890567578603512 1.0 ['SEL1L|p.Y720Sfs*29|1|0.08|ENSG00000071537|chr14:81479628-81479628|T/-|frameshift_variant', 'ENSG00000071537|ENST00000336735|SEL1L'] 27407 23520 FLWKKKLRQ True NCI_RA007_Epitope_Rep5 1245.7709970716899 1245.7693649037901 97.783 3 -0.9406543866562976 0.2890567578603512 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 35332 18764 GRRRKRPLQ True PC9_epitope_Rep4 1165.7268408439297 1165.72519490379 80.259 3 -0.9406548858695876 0.2890567578603512 1.0 ['ENSG00000178919|ENST00000375123|FOXE1'] 133311 24590 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63648993586 103.08 2 -0.9406840298195658 0.2890567578603512 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 116126 24169 TSSNASCST True NCI_RA007_Epitope_Rep2 856.3232612481601 856.32216993586 101.52 2 -0.9406994005584753 0.2890567578603512 1.0 ['ENSG00000171456|ENST00000375687|ASXL1', 'ASXL1|p.G643Rfs*15|1|0.29|ENSG00000171456|chr20:32434637-32434638|-/T|frameshift_variant', 'nc|ENSG00000171456|Q8IXJ9-2|ASXL1'] 16600 7582 EENKLLKEQ True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 34.145 2 -0.9407184265008484 0.2890567578603512 1.0 ['nc|ENSG00000135205|Q8IYE0-2|CCDC146', 'ENSG00000135205|ENST00000285871|CCDC146'] 22023 13689 ESIYSRPGSSI True PC9_epitope_Rep1 1194.5880664685799 1194.58696993586 57.507 2 -0.9407327150698667 0.2890625 1.0 ['nc|ENSG00000099204|O14639-2|ABLIM1', 'nc|ENSG00000099204|O14639-6|ABLIM1', 'ENSG00000099204|ENST00000533213|ABLIM1', 'nc|ENSG00000099204|O14639-3|ABLIM1', 'nc|ENSG00000099204|O14639-5|ABLIM1'] 139216 19968 YLFFKDRYFWR True PC9_epitope_Rep1 1639.8299684997896 1639.82833490379 81.631 3 -0.9407450768858316 0.2890625 1.0 ['ENSG00000166670|ENST00000279441|MMP10'] 30770 21770 GALRWREL True PC9_epitope_Rep4 999.5613982282699 999.56030993586 91.934 2 -0.9408086682539296 0.28907217617356035 1.0 ['ENST00000366497.6_1_1:247611820-247611910:+|nuORF'] 136084 25577 WRKVLLKG True PC9_epitope_Rep3 998.6389202729798 998.6378299358599 103.87 2 -0.9408215107795678 0.2890818520837303 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 56981 5046 LDREEDAV True NCI_RA007_Epitope_Rep4 945.4403396057298 945.43924993586 25.904 2 -0.9408388769377944 0.2890875932277206 1.0 ['PCDHGA4|p.E236D|1|0.27|ENSG00000262576|chr5:141355815-141355815|G/T|missense_variant'] 57563 6981 LEDSLLCP True H1975_Epitope_Rep3 888.42626976472 888.42516993586 31.815 2 -0.9408411810004497 0.2890875932277206 1.0 ['nc|ENSG00000090061|O75909-2|CCNK'] 53207 13655 KQELLVEIQR True NCI_RA007_Epitope_Rep1 1254.72958575218 1254.7284899358601 57.127 2 -0.9408644988730743 0.2890972685330103 1.0 ['ENST00000462117.5_1_19:48972629-48975663:+|nuORF', 'ENSG00000105443|ENST00000452733|CYTH2', 'nc|ENSG00000105443|Q99418|CYTH2'] 131588 25495 VTLIVSVLTV True PC9_epitope_Rep2 1042.6637976081402 1042.6627099358602 103.75 2 -0.9409237929148494 0.2890990745781165 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 54092 27162 KVLEKYWLYKI True PC9_epitope_Rep3 1481.86462267301 1481.86297490379 111.75 3 -0.9409346294748911 0.2890990745781165 1.0 ['ENST00000512116.5_1_4:123818829-123833766:-|nuORF', 'ENST00000503370.5_1_4:123814355-123833769:-|nuORF'] 120792 6156 VELELTEFHYF True NCI_RA007_Epitope_Rep1 1425.6816325002499 1425.67999490379 27.982 3 -0.9409439375442314 0.2890990745781165 1.0 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 59997 7960 LGIQKRFSP True H1975_Epitope_Rep1 1044.60801406752 1044.6069099358601 35.567 2 -0.9410555132414838 0.28913203233444923 1.0 ['ENSG00000174851|ENST00000376901|YIF1A'] 136087 23539 WRKVLLKG True PC9_epitope_Rep6 998.6389202729798 998.6378299358599 103.69 2 -0.941059925381395 0.28913203233444923 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 66630 11075 LSKGLTNP True PC9_epitope_Rep2 828.4705175352001 828.46942993586 47.918 2 -0.9410840394875791 0.2891417062449818 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF', 'nc|ENSG00000072121|Q68DK2-3|ZFYVE26', 'ENST00000394455.6_1_14:68196461-68236507:-|nuORF'] 13445 5404 DNDEGLKIAA True H1975_Epitope_Rep3 1044.50875351872 1044.5076499358602 25.848 2 -0.9410858483017536 0.28914351032849794 1.0 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 41638 15947 IAELRIELK True PC9_epitope_Rep4 1083.6651945904698 1083.6640899358601 69.267 2 -0.9410975369128589 0.28914351032849794 1.0 ['nc|ENSG00000165699|Q92574-2|TSC1', 'ENSG00000165699|ENST00000298552|TSC1'] 137570 7905 YEEMMHKTRKY True H1975_Epitope_Rep1 1514.70100512918 1514.6999099358602 35.358 2 -0.9411008681888523 0.28914351032849794 1.0 ['PCLO|p.H1926R|1|0.14|ENSG00000186472|chr7:82955176-82955176|T/C|missense_variant'] 79697 22579 PDSLFSVVI True PC9_epitope_Rep1 975.52769805815 975.52660993586 91.658 2 -0.9412087064233867 0.2891894098119779 1.0 ['PCDH11Y|p.I832Sfs*2|1|0.09|ENSG00000099715|chrY:5100072-5100073|AT/-|frameshift_variant', 'PCDH11X|p.G1071Efs*50|1|0.48|ENSG00000102290|chrX:92387800-92387800|G/-|frameshift_variant', 'nc|ENSG00000099715|Q9BZA8|PCDH11Y', 'nc|ENSG00000102290|Q9BZA7-8|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-3|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-4|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-5|PCDH11X', 'ENSG00000099715|ENST00000698851|PCDH11Y', 'PCDH11Y|p.G1140Afs*43|1|0.73|ENSG00000099715|chrY:5737337-5737337|G/-|frameshift_variant', 'nc|ENSG00000102290|Q9BZA7-7|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-6|PCDH11X', 'nc|ENSG00000099715|Q9BZA8-4|PCDH11Y', 'nc|ENSG00000099715|Q9BZA8-2|PCDH11Y', 'nc|ENSG00000099715|Q9BZA8-3|PCDH11Y', 'ENST00000361724.3_1_X:91090458-91134302:+|nuORF', 'nc|ENSG00000102290|Q9BZA7-2|PCDH11X', 'ENSG00000102290|ENST00000682573|PCDH11X'] 431 18621 AALPLWLCRV True NCI_RA007_Epitope_Rep5 1140.64777070452 1140.64717496793 78.44 1 -0.9412269711296928 0.2891894098119779 1.0 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|53|1|anti-sense'] 16582 14448 EEMMHKTRKY True PC9_epitope_Rep6 1351.6376765966302 1351.63656993586 67.465 2 -0.9412459592251474 0.2891894098119779 1.0 ['PCLO|p.H1926R|1|0.14|ENSG00000186472|chr7:82955176-82955176|T/C|missense_variant'] 13553 9627 DPAVSKELAK True NCI_RA007_Epitope_Rep5 1056.5815245361598 1056.5804299358601 43.672 2 -0.9412470784763372 0.2891894098119779 1.0 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 106525 9946 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 45.912 2 -0.9412878093852758 0.2891894098119779 1.0 ['chr20:43713106-43715163|225|24.37|0.37|6.04|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 101962 12708 SLQEQFHSV True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 56.736 2 -0.9412911092214427 0.2891894098119779 1.0 ['EGFLAM|p.L85F|1|0.4|ENSG00000164318|chr5:38338745-38338745|G/T|missense_variant'] 66329 11709 LSFYWFKYYVY True H1975_Epitope_Rep1 1577.75948889813 1577.7583899358601 50.03 2 -0.9412930384881086 0.2891894098119779 1.0 ['ENST00000509649.5_1_5:21459626-21462031:+|nuORF'] 73787 6025 NAGDMIEMQGF True NCI_RA007_Epitope_Rep4 1211.49509468387 1211.49398993586 29.793 2 -0.941300591030085 0.2891894098119779 1.0 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'ENST00000574857.1_1_17:2268210-2275697:+|nuORF'] 126112 8502 VLERRYSDFAK True H1975_Epitope_Rep3 1382.7306483813397 1382.7295499358602 37.689 2 -0.9413360078044246 0.2891894098119779 1.0 ['ENSG00000167208|ENST00000330943|SNX20'] 76207 8577 NNPSIPAG True PC9_epitope_Rep1 768.37661715036 768.37606496793 37.828 1 -0.9413442645786758 0.2891894098119779 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766-6|RREB1'] 25004 1022 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 5.415 2 -0.9413780450348844 0.2891894098119779 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 75478 17061 NKKAAPRA True H1975_Epitope_Rep2 854.5086343794198 854.50752993586 70.885 2 -0.9414098500199647 0.2891894098119779 1.0 ['ENST00000568570.1_1_16:31993258-32005419:+|nuORF', 'nc|ENSG00000275832|Q9P227-2|ARHGAP23', 'ENSG00000275832|ENST00000622683|ARHGAP23'] 131589 24732 VTLIVSVLTV True PC9_epitope_Rep4 1042.6637976081402 1042.6627099358602 103.63 2 -0.94141808414006 0.2891894098119779 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 86007 7750 QHLQWLSDSR True H1975_Epitope_Rep2 1268.6261833127999 1268.6250899358602 34.764 2 -0.9414264354969087 0.2891894098119779 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 80899 21281 PHWRRPRRRRG True PC9_epitope_Rep6 1528.8824470518798 1528.8808049037902 94.71 3 -0.9414429799206567 0.2891894098119779 1.0 ['KCNC2|p.D173Rfs*80|1|0.2|ENSG00000166006|chr12:75207467-75207468|-/G|frameshift_variant'] 62682 13833 LLLLLLLL True H1975_Epitope_Rep2 922.68307650074 922.68196993586 58.356 2 -0.9414601265026125 0.2891894098119779 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'SEMA6C|p.M8I|1|0.48|ENSG00000143434|chr1:151142598-151142598|C/G|missense_variant', 'EIF2AK3|p.E232Rfs*74|1|0.4|ENSG00000172071|chr2:88593345-88593345|C/-|frameshift_variant', 'ENSG00000184709|ENST00000371542|LRRC26', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'PCDHA8|p.W12G|1|0.22|ENSG00000204962|chr5:140841355-140841355|T/G|missense_variant', 'ENSG00000117899|ENST00000261758|MESD', 'ENSG00000182685|ENST00000328540|BRICD5', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000183971|ENST00000566435|NPW', 'ENSG00000070031|ENST00000176195|SCT', 'ENSG00000178473|ENST00000380433|UCN3', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'nc|ENSG00000117899|Q14696-2|MESD', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000121316|ENST00000240617|PLBD1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 67316 17119 LSSCRHYMP True H1975_Epitope_Rep2 1092.48447043052 1092.48336993586 71.123 2 -0.9414798112281283 0.2892087505441881 1.0 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 94763 9792 RSKTDLDCIF True PC9_epitope_Rep4 1196.5859582935998 1196.58430490379 45.306 3 -0.9414825238577186 0.2892087505441881 1.0 ['ENSG00000254093|ENST00000314787|PINX1', 'ENST00000524061.1_1_8:10645233-10677771:-|nuORF'] 40684 4699 HRRPAGRHLRP True PC9_epitope_Rep1 1351.7810016751098 1351.77934490379 22.946 3 -0.9415100443924234 0.2892184205156112 1.0 ['ENST00000458024.5_1_X:100913490-100914433:-|nuORF'] 44794 9716 IMMFIGGP True PC9_epitope_Rep3 864.4237676669198 864.42266993586 42.326 2 -0.9415555978413357 0.2892241555226033 1.0 ['nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 114090 10001 TPFRKDLI True NCI_RA007_Epitope_Rep3 988.5705659296398 988.56946993586 46.431 2 -0.941558535006273 0.2892241555226033 1.0 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000272193.10_1_1:204085443-204095259:+|nuORF'] 20132 7535 ENADSWIPPKR True H1975_Epitope_Rep1 1311.6571490879098 1311.6560499358602 33.977 2 -0.9416165894486906 0.2892474288512815 1.0 ['ENST00000609948.1_1_9:131085485-131085647:+|nuORF'] 56799 9631 LDMWLSSVTVP True NCI_RA007_Epitope_Rep1 1246.62676047642 1246.62566993586 41.462 2 -0.9416527336962569 0.28925709777034103 1.0 ['ENSG00000255582|ENST00000542433|OR10G2'] 20429 7419 EPFAMQNIDMP True H1975_Epitope_Rep2 1291.55769494043 1291.55658993586 33.48 2 -0.941720931244401 0.2892764348192787 1.0 ['ENSG00000143971|ENST00000272342|ETAA1'] 64479 7614 LPQEVPSMQD True H1975_Epitope_Rep1 1142.52777471114 1142.5266699358601 34.276 2 -0.9417358115437504 0.2892764348192787 1.0 ['nc|ENSG00000100767|O95428-4|PAPLN', 'nc|ENSG00000100767|O95428-6|PAPLN', 'nc|ENSG00000100767|O95428-5|PAPLN', 'ENSG00000100767|ENST00000644200|PAPLN'] 59312 20037 LFHWRTRLRRK True H1975_Epitope_Rep1 1567.93241693607 1567.93130993586 83.386 2 -0.941807643973858 0.28931330939166394 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 87052 15644 QNFQVLMI True PC9_epitope_Rep6 991.5160878286298 991.51498993586 72.379 2 -0.9418307771899439 0.2893190412710504 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 46596 7857 ITCRYRDYRYP True H1975_Epitope_Rep1 1504.7245174550799 1504.7234299358602 35.174 2 -0.9418397125565908 0.2893190412710504 1.0 ['ENSG00000171714|ENST00000324559|ANO5', 'ENST00000532043.1_1_11:22294373-22299379:+|nuORF'] 25029 16482 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 68.225 2 -0.9418817553411616 0.28932083735734593 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 74331 19310 NENHLFSYFNL True PC9_epitope_Rep4 1396.6411646706 1396.64006993586 82.383 2 -0.9418823669214735 0.28932083735734593 1.0 ['ENST00000266604.6_1_12:66517251-66517542:-|nuORF'] 54090 27593 KVLEKYWLYKI True PC9_epitope_Rep1 1481.86462267301 1481.86297490379 113.03 3 -0.941887529099457 0.28932083735734593 1.0 ['ENST00000512116.5_1_4:123818829-123833766:-|nuORF', 'ENST00000503370.5_1_4:123814355-123833769:-|nuORF'] 83181 9371 PSSTTPPIE True NCI_RA007_Epitope_Rep4 927.4549270407099 927.4543749679301 42.901 1 -0.9419480659198323 0.28934410620528306 1.0 ['ENSG00000159592|ENST00000355105|GPBP1L1'] 16323 5355 EEGWASFSCE True H1975_Epitope_Rep3 1143.41788990899 1143.4167899358602 25.666 2 -0.9419734458049113 0.2893748979924923 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 127014 5454 VLSCLMFVWI True NCI_RA007_Epitope_Rep5 1209.6290094058897 1209.62790993586 27.665 2 -0.9419804115449857 0.2893748979924923 1.0 ['ENSG00000197563|ENST00000640252|PIGN'] 63234 6768 LLSIRGVDGP True H1975_Epitope_Rep3 1025.5869442697697 1025.58584993586 30.988 2 -0.9420308035811861 0.2893748979924923 1.0 ['nc|ENSG00000100095|Q9BYH1-2|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-3|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-5|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-4|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-7|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-6|SEZ6L', 'ENSG00000100095|ENST00000248933|SEZ6L'] 101898 9118 SLPSLGKSL True NCI_RA007_Epitope_Rep5 900.52803241132 900.52692993586 41.724 2 -0.942037044857551 0.2893748979924923 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 87148 6954 QPFAFRCR True NCI_RA007_Epitope_Rep5 1023.5072544804299 1023.50614993586 33.433 2 -0.9420437012022964 0.2893748979924923 1.0 ['L1MA4A_dup2646|chr7:55461716-55462655:-|1.008969920648077|0.4304615177296836|1.23|541.0|62|3|anti-sense'] 122236 11966 VGAQAWQAAGP True PC9_epitope_Rep5 1054.5195929859399 1054.51848993586 51.023 2 -0.9420519754744447 0.2893748979924923 1.0 ['LTR12C_dup1159|chr6:63441884-63443495:-|1.4512251268435548|0.0180559155246374|6.33|493.0|92|3|anti-sense'] 38749 24174 HGNILIVTIRE True PC9_epitope_Rep4 1263.72992010535 1263.7282649037902 101.46 3 -0.9421022956233368 0.2893981638898334 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 94640 5600 RRWEEHCSLWR True H1975_Epitope_Rep1 1556.7418988547197 1556.74024490379 26.607 3 -0.9421206784089479 0.2894078285232435 1.0 ['nc|ENSG00000156113|Q12791-7|KCNMA1'] 5518 18840 ALYNLVSV True PC9_epitope_Rep6 877.49091862661 877.48982993586 85.112 2 -0.9421538449552186 0.28943109333986156 1.0 ['ENSG00000160445|ENST00000291900|ZER1'] 97059 9474 SDDNPYYNYYD True H1975_Epitope_Rep1 1427.51535502079 1427.51371490379 41.359 3 -0.9421839771135462 0.2894407572625394 1.0 ['ENSG00000113083|ENST00000231004|LOX', 'LOX|p.A357Tfs*2|1|0.13|ENSG00000113083|chr5:122070553-122070556|CTGC/-|frameshift_variant', 'LOX|p.I359Hfs*7|1|0.07|ENSG00000113083|chr5:122070551-122070552|-/A|frameshift_variant'] 22712 8909 ETRYRQRYLDL True NCI_RA007_Epitope_Rep1 1511.7844748593498 1511.78281490379 38.655 3 -0.9422172909338445 0.2894504209223572 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 95162 15740 RVGGRGGGI True PC9_epitope_Rep6 827.4725832238698 827.47148993586 72.771 2 -0.9423086742103122 0.28950052354597006 1.0 ['ENST00000403681.6_2_12:66218404-66218671:+|nuORF'] 124057 9076 VGSKLAYV True PC9_epitope_Rep4 835.48035394291 835.47924993586 42.494 2 -0.9423428293674225 0.28950052354597006 1.0 ['ENSG00000078098|ENST00000188790|FAP', 'ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'FAP|p.S363Qfs*38|1|0.1|ENSG00000078098|chr2:162203073-162203107|AGCCATCCTTGTCACTAAATATTTTGTAGTACGAA/-|frameshift_variant'] 1616 6560 AEFKKMRRDL True NCI_RA007_Epitope_Rep2 1292.70232545852 1292.70122993586 30.129 2 -0.9423589791723804 0.28950052354597006 1.0 ['MYH1|p.Q1176K|1|0.51|ENSG00000109061|chr17:10501322-10501322|G/T|missense_variant'] 42164 10699 IDPWIFLMR True PC9_epitope_Rep6 1189.63178628721 1189.6306899358601 51.966 2 -0.9423787665293561 0.28950052354597006 1.0 ['ENST00000426799.1_1_X:65041494-65041635:-|nuORF'] 40003 11238 HPPQHQHHH True PC9_epitope_Rep4 1153.5278066842102 1153.52617490379 51.002 3 -0.9423843632257536 0.28950052354597006 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 17178 8149 EGSCDYRPV True H1975_Epitope_Rep2 1024.42839502304 1024.42728993586 36.295 2 -0.9423871299841327 0.28950052354597006 1.0 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 60717 8424 LHQNSPVL True PC9_epitope_Rep3 906.49231560894 906.49120993586 37.367 2 -0.9424027395464266 0.28950052354597006 1.0 ['nc|ENSG00000186075|Q6X784-2|ZPBP2', 'ENSG00000186075|ENST00000348931|ZPBP2'] 63343 23622 LLTKGGLLLLS True NCI_RA007_Epitope_Rep4 1126.7325458742998 1126.7314499358602 102.46 2 -0.9424233551748834 0.28950052354597006 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 73113 20666 MRKWPRQYEWF True H1975_Epitope_Rep3 1625.79253744525 1625.79144993586 86.355 2 -0.9424305437240243 0.2895101852103674 1.0 ['ENSG00000175874|ENST00000324768|CREG2'] 97942 10433 SENLGHGYF True PC9_epitope_Rep1 1022.44575933934 1022.4446699358599 45.018 2 -0.9424656704267842 0.2895198466120018 1.0 ['nc|ENSG00000110013|Q9HAT2-2|SIAE', 'ENSG00000110013|ENST00000263593|SIAE'] 119466 25854 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 105.2 1 -0.9424683001882224 0.2895295077508839 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 37506 15506 GVVDKIDYYL True PC9_epitope_Rep1 1183.61249031127 1183.6113899358602 64.466 2 -0.9424884022303643 0.28955276648400213 1.0 ['ENSG00000133704|ENST00000256079|IPO8'] 22351 8986 ETDRKFREEEQ True H1975_Epitope_Rep1 1465.67973500729 1465.67862993586 39.471 2 -0.9425144152368491 0.2895624269125126 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 83633 6968 PVDRYRQILL True H1975_Epitope_Rep1 1271.7350054857898 1271.73334490379 31.843 3 -0.942539055599115 0.28956421238697394 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 61309 21607 LIQSLTLSP True PC9_epitope_Rep3 970.5698972233 970.56880993586 88.408 2 -0.942585321353679 0.28956421238697394 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 26343 19352 FHRRLPALR True NCI_RA007_Epitope_Rep5 1164.6992291137597 1164.69757490379 81.315 3 -0.9426129026063458 0.28956421238697394 1.0 ['ENST00000472912.5_1_10:75633263-75634202:-|nuORF'] 89450 10110 QYERDKHLFID True NCI_RA007_Epitope_Rep1 1462.7204776204596 1462.7193899358601 43.337 2 -0.9426474175679898 0.28956778289894086 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 1185 7568 AEASEFEDPL True NCI_RA007_Epitope_Rep4 1106.4767846841 1106.4756899358601 35.759 2 -0.942650340131541 0.28956778289894086 1.0 ['ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 105879 5849 SSPLSTDAP True H1975_Epitope_Rep2 873.40797684829 873.4074249679301 27.486 1 -0.9426590204227235 0.28956778289894086 1.0 ['PITPNC1|p.T278S|1|0.16|ENSG00000154217|chr17:67692721-67692721|A/T|missense_variant'] 61838 6382 LLAVSHVG True PC9_epitope_Rep3 794.46503823194 794.46394993586 29.573 2 -0.9426704022341399 0.28956778289894086 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 84722 6274 QDREGRAVPQW True PC9_epitope_Rep6 1340.6585460702397 1340.65744993586 32.639 2 -0.9426719658809647 0.28956778289894086 1.0 ['ENST00000356742.9_1_12:111125990-111126236:-|nuORF'] 63905 11791 LNQAMQQEV True PC9_epitope_Rep2 1059.50189431647 1059.5007899358602 50.686 2 -0.9426791751992564 0.28956778289894086 1.0 ['ENST00000326019.10_1_2:27886341-27886545:+|nuORF'] 95214 2688 RVKVLLVLNLI True H1975_Epitope_Rep1 1278.8751277870597 1278.87402993586 13.831 2 -0.9427241257286841 0.2895831633901623 1.0 ['ENSG00000185274|ENST00000333538|GALNT17'] 25003 828 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 4.3983 2 -0.9427284662222082 0.2895831633901623 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18701 8927 ELAKTYLECKE True H1975_Epitope_Rep3 1325.65370350025 1325.65260993586 39.335 2 -0.9427487053385073 0.2895831633901623 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 3169 9443 AGDTWASEVGP True PC9_epitope_Rep1 1088.47745339044 1088.47634993586 41.179 2 -0.9428021523523137 0.28959282169804906 1.0 ['nc|ENSG00000139291|Q96HH6-2|TMEM19', 'ENSG00000139291|ENST00000266673|TMEM19'] 7735 21356 ASPLIIQSL True PC9_epitope_Rep5 940.5593325396001 940.55822993586 87.205 2 -0.9428528590471411 0.2895985426268064 1.0 ['HAS2|p.H56P|1|0.55|ENSG00000170961|chr8:121629174-121629174|T/G|missense_variant'] 20463 13808 EPIEYYWQRIR True NCI_RA007_Epitope_Rep2 1551.78341223019 1551.7823099358602 58.359 2 -0.9428708302434285 0.2895985426268064 1.0 ['CLMP|p.V163E|1|0.12|ENSG00000166250|chr11:123083748-123083748|A/T|missense_variant'] 88392 22131 QSLIPFVQL True PC9_epitope_Rep4 1043.60153170475 1043.60097496793 93.344 1 -0.9430039954902231 0.28960820033171103 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 15895 18458 EDKKQKKK True H1975_Epitope_Rep1 1030.6134933707797 1030.6123899358602 76.944 2 -0.9430216377398575 0.28961392060902663 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5'] 84063 19201 PVYMGMHPII True PC9_epitope_Rep5 1156.5773081861998 1156.57620993586 78.897 2 -0.9430351266395713 0.28961392060902663 1.0 ['ENST00000288937.6_1_11:6702876-6703137:-|nuORF'] 12466 10141 DIYNNLRQTP True PC9_epitope_Rep3 1232.61494992276 1232.6138499358601 43.961 2 -0.9430725682009532 0.2896468285255975 1.0 ['ENST00000403534.7_1_19:45250964-45261799:+|nuORF', 'ENSG00000069399|ENST00000164227|BCL3'] 59453 22631 LFPRRRRRRRR True PC9_epitope_Rep5 1624.0246946114698 1624.0235899358602 92.049 2 -0.9430952279527395 0.2896468285255975 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 95213 2619 RVKVLLVLNLI True H1975_Epitope_Rep1 1278.8751277870597 1278.87402993586 13.491 2 -0.9431757271880035 0.2896836724984027 1.0 ['ENSG00000185274|ENST00000333538|GALNT17'] 79360 4806 PASENTKAP True NCI_RA007_Epitope_Rep3 913.4505103666099 913.44940993586 25.87 2 -0.9432475836061438 0.28968939033507785 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'nc|ENSG00000065534|Q15746-11|MYLK', 'nc|ENSG00000065534|Q15746-7|MYLK', 'ENST00000504946.5_1_3:123400948-123419770:-|nuORF'] 75819 11431 NLPAPDQPQPP True H1975_Epitope_Rep1 1172.5825871653199 1172.5814899358602 48.95 2 -0.9432493287662792 0.28968939033507785 1.0 ['ENSG00000124302|ENST00000650847|CHST8'] 63303 9996 LLSTIVLA True H1975_Epitope_Rep1 828.5320551625999 828.53094993586 43.386 2 -0.943446293473796 0.2897630731170226 1.0 ['ENST00000409465.5_1_2:191878499-191878559:-|nuORF'] 20101 7975 EMLRTQSVA True PC9_epitope_Rep5 1033.52262976105 1033.5215299358601 35.615 2 -0.9435152848331299 0.2897630731170226 1.0 ['COG1|p.A940Gfs*7|1|0.42|ENSG00000166685|chr17:73208324-73208325|-/G|frameshift_variant', 'ENSG00000166685|ENST00000299886|COG1'] 117270 5769 TVMADSFQIK True NCI_RA007_Epitope_Rep5 1138.5692456003 1138.56760490379 28.878 3 -0.9435391281539308 0.289786320139191 1.0 ['ENSG00000165959|ENST00000298912|CLMN', 'ENST00000556454.1_1_14:95660863-95677170:-|nuORF'] 100477 6993 SLAPLPLCLYR True NCI_RA007_Epitope_Rep1 1244.69511481976 1244.69400993586 31.201 2 -0.9435899591764129 0.2898056272937339 1.0 ['ENST00000581223.2_17:21911572-21911938:+|nuORF'] 33980 5887 GLSRYHPYGK True NCI_RA007_Epitope_Rep1 1176.6039913162401 1176.60288993586 26.951 2 -0.9435970718219562 0.2898056272937339 1.0 ['ENSG00000183779|ENST00000331569|ZNF703'] 11154 9395 DDIKEWLEDKG True NCI_RA007_Epitope_Rep2 1346.6354105838197 1346.63430993586 41.153 2 -0.9436269584512399 0.289815280477362 1.0 ['ENSG00000138385|ENST00000260956|SSB', 'ENST00000474273.5_1_2:170663267-170663405:+|nuORF', 'ENST00000468600.1_1_2:170662301-170663405:+|nuORF'] 46943 6697 ITPDPISV True PC9_epitope_Rep5 840.45928414516 840.45818993586 30.732 2 -0.9436784671580843 0.28984817800008156 1.0 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 34746 8679 GQEWTRYQREY True H1975_Epitope_Rep1 1514.6902401213397 1514.68914993586 38.314 2 -0.9436918910446408 0.28984817800008156 1.0 ['ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A'] 112568 6037 TLEKFQQEK True NCI_RA007_Epitope_Rep2 1149.60298825673 1149.60188993586 28.087 2 -0.9438364975268031 0.2898986054856335 1.0 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant'] 70553 20139 LVYYINIFR True PC9_epitope_Rep1 1199.6702799709099 1199.66863490379 82.296 3 -0.9438998280987358 0.28996262317363236 1.0 ['ENST00000504959.5_1_4:186260544-186290945:+|nuORF', 'nc|ENSG00000109762|Q9H3E2-2|SNX25', 'nc|ENSG00000109762|Q9H3E2|SNX25', 'ENSG00000109762|ENST00000652585|SNX25'] 99465 13314 SICCPHPSF True PC9_epitope_Rep2 989.40990850793 989.40880993586 56.487 2 -0.943913648186746 0.2899701005708073 1.0 ['ENST00000391959.5_2_1:202549704-202549908:+|nuORF'] 136582 6226 WWIWWQWWKLQ True NCI_RA007_Epitope_Rep2 1744.86668836168 1744.86505490379 28.824 3 -0.9439203663303899 0.2899701005708073 1.0 ['chr12:54282841-54283827|531|24.4|0.0|21.22|+|1|HNRNPA1,HNRNPA1|1'] 568 10946 AAQWAAPQ True PC9_epitope_Rep1 841.4082516318099 841.40714993586 46.992 2 -0.9439374775109537 0.2899701005708073 1.0 ['ENST00000356864.3_1_8:22960127-22960358:+|nuORF'] 47647 5291 IWIKNKESRNE True NCI_RA007_Epitope_Rep4 1415.7521121019101 1415.75047490379 26.904 3 -0.9439420602409384 0.2899701005708073 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant'] 86796 18682 QLNHILGIL True PC9_epitope_Rep6 1019.6127650947899 1019.61166993586 84.504 2 -0.9439835924701642 0.2899701005708073 1.0 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'MAPK1|p.D235V|1|0.39|ENSG00000100030|chr22:21788714-21788714|T/A|missense_variant'] 57460 18624 LECGKVFKHRS True NCI_RA007_Epitope_Rep5 1302.6866753943798 1302.68503490379 78.452 3 -0.9440115033836 0.28997580930118777 1.0 ['ENSG00000083844|ENST00000263095|ZNF264'] 66061 10404 LSEHNNAN True PC9_epitope_Rep3 897.39405811965 897.39296993586 44.959 2 -0.9440158799376706 0.28997580930118777 1.0 ['ENSG00000138641|ENST00000402738|HERC3'] 119468 26004 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 105.88 1 -0.9440641871642833 0.28998328509111665 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 46010 5383 ISGDRSFSGP True H1975_Epitope_Rep3 1021.4828731240499 1021.48176993586 25.773 2 -0.9440726000970557 0.28998328509111665 1.0 ['ENST00000389693.3_1_11:36397601-36484283:+|nuORF', 'nc|ENSG00000135362|Q6MZQ0-3|PRR5L', 'PRR5L|p.E282Gfs*38|1|0.67|ENSG00000135362|chr11:36462470-36462471|-/T|frameshift_variant', 'ENSG00000135362|ENST00000530639|PRR5L'] 119813 9456 VDALRLVSS True PC9_epitope_Rep2 958.54474510462 958.54364993586 41.71 2 -0.9440793791135167 0.28998328509111665 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 36326 7006 GVELRQQQLED True H1975_Epitope_Rep1 1313.6575430107298 1313.65644993586 31.983 2 -0.9440882355946847 0.28998328509111665 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 12287 12417 DILVFGALIY True PC9_epitope_Rep1 1122.63249747986 1122.6308549037901 52.625 3 -0.9441066254204722 0.28998328509111665 1.0 ['DOCK2|p.D675G|1|0.07|ENSG00000134516|chr5:169716295-169716295|A/G|missense_variant'] 139597 14661 YLWTEWPLL True PC9_epitope_Rep2 1219.62774645259 1219.62610490379 61.66 3 -0.944196333260076 0.29002975988259116 1.0 ['ENST00000418381.5_1_2:170843224-170843260:+|nuORF'] 136756 4112 WYPYNYSR True NCI_RA007_Epitope_Rep5 1147.50869394907 1147.50703490379 22.304 3 -0.9442035796893575 0.29002975988259116 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11'] 102481 18314 SLVFHLTQFMP True PC9_epitope_Rep1 1318.6743793751798 1318.67328993586 75.234 2 -0.9442552439355885 0.2900429371161476 1.0 ['ENST00000228825.11_1_12:110874003-110874424:-|nuORF'] 60056 17584 LGLEEYAVFYP True PC9_epitope_Rep1 1299.6387050591097 1299.6376099358602 72.428 2 -0.9442712804640533 0.2900429371161476 1.0 ['nc|ENSG00000109680|Q8N5T2-2|TBC1D19', 'ENSG00000109680|ENST00000264866|TBC1D19', 'ENST00000502873.5_1_4:26585743-26755545:+|nuORF'] 138997 20507 YKSELRKSLIC True NCI_RA007_Epitope_Rep2 1338.7329568804598 1338.73184993586 84.84 2 -0.9442721301662387 0.2900429371161476 1.0 ['ENSG00000249961|ENST00000433154|TERB1'] 64909 16436 LQEDVKKAELH True PC9_epitope_Rep4 1308.70376492716 1308.70266993586 71.185 2 -0.9442987352747659 0.2900429371161476 1.0 ['ENSG00000152240|ENST00000282058|HAUS1', 'nc|ENSG00000152240|Q96CS2-2|HAUS1'] 36742 9014 GVKGAKIK True PC9_epitope_Rep5 799.5279728416699 799.52686993586 39.618 2 -0.9443040501328539 0.2900429371161476 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 54091 27663 KVLEKYWLYKI True PC9_epitope_Rep1 1481.86462267301 1481.86297490379 113.39 3 -0.9443291248187163 0.2900429371161476 1.0 ['ENST00000512116.5_1_4:123818829-123833766:-|nuORF', 'ENST00000503370.5_1_4:123814355-123833769:-|nuORF'] 22249 10946 ETAEDRDKNKP True NCI_RA007_Epitope_Rep1 1301.6211575020097 1301.62006993586 46.572 2 -0.9443387821575897 0.2900429371161476 1.0 ['ENSG00000138604|ENST00000261858|GLCE'] 99050 18522 SHFTRPAGVS True PC9_epitope_Rep5 1057.5304920228098 1057.52938993586 76.269 2 -0.9444117050889168 0.2900447016943165 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 38937 3140 HHHHRWWRHCH True NCI_RA007_Epitope_Rep1 1627.7340685660301 1627.73242490379 16.104 3 -0.9444236165129999 0.2900447016943165 1.0 ['ENST00000373316.4_1_X:77380531-77380872:+|nuORF'] 87392 9498 QPVLSQTEA True PC9_epitope_Rep3 971.4923751785899 971.49126993586 41.483 2 -0.9444464750830669 0.2900447016943165 1.0 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF', 'ENST00000493673.1_1_1:151373717-151374107:+|nuORF'] 135307 10222 WFWWYWQKEKI True H1975_Epitope_Rep1 1698.8347195270596 1698.83362993586 44.262 2 -0.9444763951227917 0.29008152173913043 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 27365 21562 FLSYPTWGLV True PC9_epitope_Rep5 1181.61209638845 1181.61098993586 87.977 2 -0.9445215300455235 0.29011398062736893 1.0 ['nc|ENSG00000072041|Q9H2J7-3|SLC6A15', 'ENSG00000072041|ENST00000266682|SLC6A15'] 22585 8478 ETLDLHSSLHQ True H1975_Epitope_Rep2 1278.6204292260202 1278.6193299358602 37.563 2 -0.9445445400566563 0.29011398062736893 1.0 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1|p.G1905Afs*3|1|0.14|ENSG00000144426|chr2:203166234-203166234|G/-|frameshift_variant'] 16236 6954 EEERREQQEER True NCI_RA007_Epitope_Rep1 1516.68661129288 1516.6855099358602 31.053 2 -0.9445658024478005 0.29011398062736893 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 80441 21565 PGKRLIDRIVE True PC9_epitope_Rep6 1294.7721192705 1294.77102993586 95.826 2 -0.9446055327731142 0.29011398062736893 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 12227 7720 DIIMMEDLP True NCI_RA007_Epitope_Rep3 1075.49296942555 1075.4918699358602 37.49 2 -0.9446068098540975 0.29011398062736893 1.0 ['ENSG00000179094|ENST00000317276|PER1', 'nc|ENSG00000179094|O15534-4|PER1'] 71612 16905 MDKLKFLF True NCI_RA007_Epitope_Rep4 1040.5728744287599 1040.5717699358602 73.254 2 -0.9446096023319245 0.29011398062736893 1.0 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5'] 40941 9544 HSSYQWEL True PC9_epitope_Rep5 1048.46140940348 1048.46030993586 41.668 2 -0.9446336263531058 0.29011398062736893 1.0 ['ENSG00000149635|ENST00000279028|OCSTAMP'] 101640 23254 SLLRRKLKRH True PC9_epitope_Rep1 1305.84695597661 1305.84584993586 94.232 2 -0.9446467110733131 0.29011398062736893 1.0 ['chr12:65951415-65963245|300|35.95|0.63|5.83|+|1|HMGA2,HMGA2|1'] 101110 15406 SLGLEMEHRFI True PC9_epitope_Rep5 1330.6703566239 1330.66870490379 64.268 3 -0.9446520373923468 0.29011398062736893 1.0 ['ENSG00000188647|ENST00000340434|PTAR1'] 66039 13380 LSEGQFGIP True PC9_epitope_Rep2 946.4759968384599 946.47488993586 56.747 2 -0.9447005613217605 0.2901157419985872 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B', 'MDH1B|p.G413R|1|0.09|ENSG00000138400|chr2:206746406-206746406|C/G|missense_variant', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 111657 11820 TIEELSAQI True PC9_epitope_Rep3 1002.5233409537 1002.52224993586 50.483 2 -0.9447139297492123 0.2901157419985872 1.0 ['ENST00000427733.1_1_13:90882929-90883235:+|nuORF'] 1935 4448 AEILPAMAMRP True H1975_Epitope_Rep2 1198.6202356273398 1198.61857490379 22.221 3 -0.9447143681386899 0.2901157419985872 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 22999 17016 EVFCRDRKV True PC9_epitope_Rep5 1150.59171238038 1150.5906099358601 70.471 2 -0.944823271282907 0.29014819141277626 1.0 ['nc|ENSG00000100031|P19440-2|GGT1', 'nc|ENSG00000197421|A6NGU5|GGT3P', 'ENSG00000100031|ENST00000400382|GGT1', 'nc|ENSG00000133475|P36268-3|GGT2P'] 114065 6622 TPEQYYFCY True H1975_Epitope_Rep2 1212.47976188956 1212.4786699358601 30.379 2 -0.9448261364749578 0.29014819141277626 1.0 ['ENSG00000169410|ENST00000618819|PTPN9'] 13489 9334 DNISVTFLSL True H1975_Epitope_Rep3 1107.58119018299 1107.58008993586 40.901 2 -0.9448324155062836 0.29014819141277626 1.0 ['nc|ENSG00000119402|Q9UKT8-2|FBXW2', 'ENSG00000119402|ENST00000608872|FBXW2'] 37262 23360 GVRRIDREEK True PC9_epitope_Rep4 1256.6949315789595 1256.69437496793 98.111 1 -0.9448767481415469 0.29014819141277626 1.0 ['ENSG00000144655|ENST00000273153|CSRNP1'] 119469 26075 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 106.23 1 -0.9448855995784323 0.29014819141277626 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 141077 19059 YSPIRKRR True NCI_RA007_Epitope_Rep1 1074.6410455313 1074.6399499358602 78.276 2 -0.9449147858417072 0.29014819141277626 1.0 ['nc|ENSG00000177679|A6NNA2|SRRM3', 'ENSG00000177679|ENST00000611745|SRRM3'] 62085 8988 LLDYEESRFYL True H1975_Epitope_Rep1 1446.70309622082 1446.7019899358602 39.478 2 -0.9449288639079871 0.29014819141277626 1.0 ['PCDHGA5|p.S306L|1|0.15|ENSG00000253485|chr5:141365247-141365247|C/T|missense_variant'] 133114 4351 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 21.843 2 -0.9449326035268484 0.29014819141277626 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 120489 6632 VEEYFWSI True PC9_epitope_Rep1 1071.49131254943 1071.49020993586 30.314 2 -0.9449368375451122 0.29014819141277626 1.0 ['ENST00000416764.5_1_3:185686359-185693154:+|nuORF', 'ENST00000306399.3_1_3:185686359-185697623:+|nuORF'] 131997 7888 VTSNLTKI True NCI_RA007_Epitope_Rep4 874.51238234718 874.51128993586 37.068 2 -0.9449449648552063 0.2901578332563636 1.0 ['ENSG00000143971|ENST00000272342|ETAA1'] 52457 23360 KKSSGAGG True PC9_epitope_Rep2 690.3660524666599 690.3655049679301 95.329 1 -0.9450670227143231 0.29018105754995044 1.0 ['ENSG00000110395|ENST00000264033|CBL'] 119721 8883 VAVVAHGP True PC9_epitope_Rep3 748.4231734199599 748.42206993586 39.118 2 -0.9451450639061985 0.29021786374008474 1.0 ['ENSG00000130147|ENST00000392011|SH3BP4', 'nc|ENSG00000130147|Q9P0V3-2|SH3BP4'] 244 18533 AAGAPNLVLAA True PC9_epitope_Rep4 966.5498304850599 966.54872993586 79.362 2 -0.9452045201082537 0.29022356232852525 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 79974 11487 PEVKSRGM-[Oxidation] True NCI_RA007_Epitope_Rep3 918.4593016089399 918.4582099358599 52.298 2 -0.945212176819105 0.29022356232852525 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'ENST00000473910.5_1_1:156568103-156568838:-|nuORF', 'ENST00000531900.1_1_1:156568015-156568838:-|nuORF', 'ENST00000498756.5_1_1:156566177-156568838:-|nuORF', 'ENST00000506832.6_1_1:156567604-156568838:-|nuORF'] 70092 24276 LVPAMLWGL True PC9_epitope_Rep5 998.5623097450599 998.56120993586 98.392 2 -0.9453087549271774 0.29026036644165865 1.0 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 112030 15200 TISGEPALLP True H1975_Epitope_Rep1 996.5491617787198 996.54861496793 63.73 1 -0.9453292743295868 0.2902700059759874 1.0 ['nc|ENSG00000165802|Q6X4W1-4|NSMF', 'nc|ENSG00000165802|Q6X4W1-6|NSMF', 'nc|ENSG00000165802|Q6X4W1-3|NSMF', 'nc|ENSG00000165802|Q6X4W1-2|NSMF', 'ENSG00000165802|ENST00000371475|NSMF', 'nc|ENSG00000165802|Q6X4W1-5|NSMF'] 94366 22588 RRRPRSQRL True PC9_epitope_Rep4 1223.74355353723 1223.7418949037901 95.116 3 -0.9453395219112152 0.29027964524847544 1.0 ['ENST00000457380.5_1_X:46937884-46939716:+|nuORF'] 88477 23289 QSSVVRCRPLT True PC9_epitope_Rep5 1244.6659399497998 1244.66484993586 94.565 2 -0.9453453747293001 0.2902813993915689 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 83500 7157 PTSKKGLAP True PC9_epitope_Rep1 897.5283667644898 897.52726993586 32.34 2 -0.9453470759360801 0.2902813993915689 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 124905 14097 VHPRVGRRRRS True H1975_Epitope_Rep1 1374.8181154598199 1374.8164649037901 59.393 3 -0.9453658644328728 0.2902813993915689 1.0 ['ENST00000597790.5_1_19:50879837-50880852:+|nuORF'] 19889 13111 ELTNAQLQ True PC9_epitope_Rep2 915.46616043075 915.46506993586 55.707 2 -0.9453841543380681 0.2902870956351685 1.0 ['PTPN21|p.D800Vfs*50|1|0.07|ENSG00000070778|chr14:88479022-88479032|CGTGGTGAGGT/-|frameshift_variant', 'ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 127073 21460 VLSVPAVSV True PC9_epitope_Rep1 869.52221875489 869.52167496793 87.387 1 -0.9453898721240676 0.2902870956351685 1.0 ['ENST00000564333.1_1_16:2487101-2487449:+|nuORF'] 25002 444 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 2.3709 2 -0.9454213391593385 0.2902967338901338 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 133113 4257 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 21.488 2 -0.9456107193281419 0.2903431698738406 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 140668 22580 YRTLIRPT True NCI_RA007_Epitope_Rep5 1018.5923640033799 1018.5912699358599 94.035 2 -0.945629440715505 0.2903431698738406 1.0 ['ENSG00000160963|ENST00000313669|COL26A1'] 20163 8598 ENEPLLDPVGP True H1975_Epitope_Rep3 1178.5819184589798 1178.58082993586 38.064 2 -0.9456511878461213 0.2903760235744646 1.0 ['nc|ENSG00000104679|Q9Y3T6-3|R3HCC1', 'ENSG00000104679|ENST00000265806|R3HCC1'] 96388 3258 RYWRIEKCH True PC9_epitope_Rep1 1289.6451449355698 1289.64349490379 17.424 3 -0.9457092766680808 0.2903760235744646 1.0 ['ENSG00000100596|ENST00000216484|SPTLC2', 'ENST00000557566.1_1_14:78045296-78063654:-|nuORF'] 25036 18097 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 74.535 2 -0.9457629339716368 0.29037777355313543 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 83255 13685 PSYRRWIWQHL True NCI_RA007_Epitope_Rep1 1540.8051507342798 1540.8040499358601 57.244 2 -0.9457636332104427 0.29037777355313543 1.0 ['nc|ENSG00000149646|Q96M20-3|CNBD2', 'nc|ENSG00000149646|Q96M20-2|CNBD2', 'ENSG00000149646|ENST00000373973|CNBD2'] 120809 14318 VELKPHDVR True PC9_epitope_Rep3 1091.60874234351 1091.60764993586 60.161 2 -0.9457743997091084 0.29037777355313543 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 30470 6551 GAGAAAEPGAL True PC9_epitope_Rep6 883.4399456829099 883.43884993586 33.88 2 -0.9457797501613949 0.29038740952975844 1.0 ['ENST00000216367.9_1_14:50150408-50154940:-|nuORF'] 39908 17247 HPFGFVAV True PC9_epitope_Rep4 872.4544735482399 872.4539249679301 74.349 1 -0.9458241740512269 0.2904106240834284 1.0 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 76208 8503 NNPSIPAG True PC9_epitope_Rep5 768.37661715036 768.37606496793 37.648 1 -0.9459054747598803 0.29043383800665357 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766-6|RREB1'] 44663 7362 ILSRASEHLE True NCI_RA007_Epitope_Rep2 1153.6091362663299 1153.60802993586 33.261 2 -0.9459855189571212 0.2904644879227709 1.0 ['ENSG00000177689|ENST00000356790|MAGEB10'] 45718 9800 IRQFEEQFERE True NCI_RA007_Epitope_Rep1 1509.7212058964499 1509.7195649037901 42.122 3 -0.9460208476658368 0.2904644879227709 1.0 ['nc|ENSG00000031003|Q9NYF5-3|FAM13B', 'nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B'] 53188 9833 KQDSKADVPQK True NCI_RA007_Epitope_Rep2 1242.65681473474 1242.6557099358602 42.873 2 -0.9460293625196303 0.2904644879227709 1.0 ['ENSG00000152076|ENST00000409943|CCDC74B', 'nc|ENSG00000152076|Q96LY2|CCDC74B'] 25202 25137 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 111.8 2 -0.9460333261341466 0.2904644879227709 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 53073 4803 KPPPPPPPP True PC9_epitope_Rep2 922.5276384884999 922.52654993586 23.845 2 -0.9460561737317645 0.2904644879227709 1.0 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'nc|ENSG00000156603|A0JLT2|MED19', 'ENSG00000156603|ENST00000431606|MED19'] 33841 20260 GLPAFELRWRA True NCI_RA007_Epitope_Rep1 1314.71968977482 1314.71858993586 83.012 2 -0.9461152747262828 0.2904644879227709 1.0 ['ENST00000480952.1_1_1:54298234-54304135:-|nuORF'] 4856 8411 ALELRPAEWEK True H1975_Epitope_Rep1 1340.7088503075995 1340.7077499358602 37.28 2 -0.9462080123533798 0.29049733208423284 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3', 'nc|ENSG00000135298|O60242-2|ADGRB3'] 36534 7373 GVGRTGVL True PC9_epitope_Rep5 757.4446371405298 757.44354993586 33.317 2 -0.9462308086637257 0.29049733208423284 1.0 ['ENSG00000152104|ENST00000366956|PTPN14'] 113954 13287 TPAFVWPSL True PC9_epitope_Rep1 1016.5331177917599 1016.53202993586 55.972 2 -0.946247034418774 0.29052054199364596 1.0 ['ENST00000488800.5_1_14:23284579-23292527:-|nuORF'] 24690 20468 FALSGPLFL True H1975_Epitope_Rep1 963.5429541994699 963.5424049679301 85.128 1 -0.9462534292255266 0.2905301744620189 1.0 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 26676 15885 FISQSFHSF True PC9_epitope_Rep4 1098.5134449763398 1098.5123499358601 69.032 2 -0.9464152594546469 0.29059411317475836 1.0 ['ENSG00000176571|ENST00000518476|CNBD1', 'CNBD1|p.W237C|1|0.31|ENSG00000176571|chr8:87237052-87237052|G/T|missense_variant', 'CNBD1|p.D225H|1|0.22|ENSG00000176571|chr8:87237014-87237014|G/C|missense_variant', 'CNBD1|p.T266Lfs*18|1|0.47|ENSG00000176571|chr8:87284699-87284699|G/-|frameshift_variant'] 80260 5176 PGCCGCCGSC True NCI_RA007_Epitope_Rep4 888.20567202208 888.20456993586 26.435 2 -0.9465928884093227 0.2906541041027451 1.0 ['ENSG00000186860|ENST00000334202|KRTAP17-1'] 66027 10162 LSEELTKYK True H1975_Epitope_Rep1 1109.59684024713 1109.59574993586 44.027 2 -0.946605892855418 0.2906541041027451 1.0 ['ENSG00000106100|ENST00000222823|NOD1', 'nc|ENSG00000106100|Q9Y239-3|NOD1'] 137060 16083 YAPALRLR True PC9_epitope_Rep4 958.57123463598 958.57012993586 69.797 2 -0.94671057108451 0.29071014512428556 1.0 ['nc|ENSG00000212719|A8MQB3|LINC02693'] 126879 16067 VLQLCPVL True PC9_epitope_Rep1 883.5201105799099 883.51900993586 66.617 2 -0.9467193993285071 0.29071014512428556 1.0 ['nc|ENSG00000156990|Q6P087-6|RPUSD3', 'nc|ENSG00000156990|Q6P087-2|RPUSD3', 'ENSG00000156990|ENST00000383820|RPUSD3', 'nc|ENSG00000156990|Q6P087|RPUSD3', 'ENST00000464783.1_1_3:9879702-9882102:-|nuORF'] 129722 23864 VRPRVGLGT True H1975_Epitope_Rep2 953.5770482924099 953.57594993586 98.304 2 -0.9467255526207928 0.29071014512428556 1.0 ['ENST00000492581.5_1_22:21067427-21075805:-|nuORF'] 14531 14786 DTPAGVLSY True PC9_epitope_Rep2 921.44436235701 921.44381496793 62.137 1 -0.9467690211546773 0.2907197741033369 1.0 ['nc|ENSG00000004948|P30988-3|CALCR', 'nc|ENSG00000004948|P30988-4|CALCR', 'ENSG00000004948|ENST00000426151|CALCR', 'nc|ENSG00000004948|P30988-1|CALCR', 'nc|ENSG00000004948|P30988-5|CALCR', 'nc|ENSG00000004948|P30988-6|CALCR'] 113324 17755 TLRLQEEF True PC9_epitope_Rep5 1034.5396597241797 1034.53856993586 73.314 2 -0.9467712889491424 0.2907294028209549 1.0 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2'] 10846 7139 CTWRNWRLWIR True H1975_Epitope_Rep1 1588.8197552525999 1588.81864993586 32.484 2 -0.9468583954074793 0.2907661815812337 1.0 ['TMEM184C|p.Q12L|1|0.26|ENSG00000164168|chr4:147617991-147617991|A/T|missense_variant'] 109343 8272 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep2 1286.5311461188496 1286.53004993586 36.77 2 -0.9468861044971894 0.2907893843752121 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 61841 5122 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 27.391 2 -0.9469034711348927 0.2907990117557625 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 86777 16098 QLLREQWIRAK True H1975_Epitope_Rep3 1439.83611650939 1439.8350099358602 67.379 2 -0.9469584548929502 0.29083578807335714 1.0 ['nc|ENSG00000105963|O75689-3|ADAP1', 'ENSG00000105963|ENST00000265846|ADAP1', 'nc|ENSG00000105963|O75689-2|ADAP1', 'ADAP1|p.T154Dfs*14|1|0.55|ENSG00000105963|chr7:905102-905103|-/A|frameshift_variant'] 241 19234 AAGAPNLVLAA True PC9_epitope_Rep2 966.5498304850599 966.54872993586 79.357 2 -0.9469917310040826 0.29085898897757506 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 110811 6775 TGLPPSISRDP True NCI_RA007_Epitope_Rep1 1138.59823722946 1138.5971499358602 30.361 2 -0.9470475540169988 0.29086466675716033 1.0 ['ENST00000313552.10_1_2:242664606-242665164:+|nuORF'] 116959 14278 TVGGLILEKPV True H1975_Epitope_Rep3 1124.6805103014399 1124.6794099358601 60.263 2 -0.9470622820670328 0.29086466675716033 1.0 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 113947 13226 TPAELIERLEQ True NCI_RA007_Epitope_Rep2 1297.68778050985 1297.6866899358602 56.078 2 -0.9470980374555129 0.29092463894016724 1.0 ['nc|ENSG00000147536|Q9BRT9-2|GINS4', 'ENSG00000147536|ENST00000276533|GINS4'] 87164 8538 QPFLEGGG True PC9_epitope_Rep3 803.3813681776298 803.38026993586 37.797 2 -0.9471162519596447 0.29092463894016724 1.0 ['ENSG00000154274|ENST00000381980|C4orf19'] 25037 18668 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 76.756 2 -0.9471290350395108 0.29093204120688954 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46745 14912 ITEMEPSPVEI True PC9_epitope_Rep5 1243.6006052982298 1243.5995099358602 62.363 2 -0.9471477482493914 0.29093204120688954 1.0 ['ENSG00000205108|ENST00000378788|FAM205A', 'nc|ENSG00000257198|Q63HN1|SPATA31F2P'] 16715 3645 EESCSHEC True H1975_Epitope_Rep2 922.2796821840199 922.2785899358599 18.973 2 -0.9471584068841926 0.29093204120688954 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 64388 20652 LPLPPPQLSI True PC9_epitope_Rep5 1073.6484818971699 1073.64738993586 84.491 2 -0.947170940725913 0.29093204120688954 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 95342 19928 RVRVKGGG True PC9_epitope_Rep6 827.5089687325898 827.50786993586 89.313 2 -0.947191793781198 0.29093204120688954 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 109119 3820 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 19.711 2 -0.9472135728586597 0.29095523765574527 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 92402 8916 RLPTPEQI True PC9_epitope_Rep6 952.5341804209199 952.53308993586 44.266 2 -0.947295231706416 0.2909744842562432 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 77438 21970 NSNFLEHRRV True H1975_Epitope_Rep1 1270.65306676698 1270.65196993586 91.386 2 -0.9473272972874444 0.2909744842562432 1.0 ['ENSG00000174586|ENST00000311044|ZNF497'] 100234 3421 SIWHTACA True PC9_epitope_Rep6 887.39597269595 887.39486993586 19.326 2 -0.9473648375200853 0.2909897805463947 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 87852 21022 QRGQGRGP True PC9_epitope_Rep4 854.4470967520198 854.44598993586 89.023 2 -0.9473790031183511 0.2909897805463947 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 63125 12389 LLRGLWQRWRR True NCI_RA007_Epitope_Rep1 1538.9058678350598 1538.9042249037902 52.165 3 -0.9473880322370468 0.2909897805463947 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 31365 4300 GDRGPRRQRL True NCI_RA007_Epitope_Rep1 1209.6802845743298 1209.67864490379 20.837 3 -0.9474863453264218 0.29102826821556044 1.0 ['ENST00000299441.4_1_11:6676849-6676939:-|nuORF'] 35723 10279 GTGACAGP True H1975_Epitope_Rep3 632.2588105167999 632.25826496793 44.59 1 -0.9474912608823183 0.29102826821556044 1.0 ['ENST00000473160.6_1_19:35622134-35624715:-|nuORF', 'nc|ENSG00000153902|Q8N135-2|LGI4', 'ENSG00000153902|ENST00000310123|LGI4'] 88756 7300 QTPDFIVPLT True H1975_Epitope_Rep1 1129.60192562757 1129.60082993586 33.09 2 -0.9475114222854258 0.29102826821556044 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 80566 7924 PGPRPLPSP True H1975_Epitope_Rep2 916.5130510535199 916.51194993586 35.425 2 -0.9475478150985168 0.29102826821556044 1.0 ['ENST00000301765.9_1_11:60899050-60899611:-|nuORF'] 4806 12404 ALEDLKFLPE True NCI_RA007_Epitope_Rep2 1173.6281403754099 1173.6270499358602 52.857 2 -0.9476164903158999 0.2910650309412659 1.0 ['ENST00000216019.11_1_22:38885294-38885507:-|nuORF'] 12355 4747 DIRPDFGSWTA True H1975_Epitope_Rep3 1263.58840082175 1263.58730993586 23.386 2 -0.9476312739621868 0.291074651576219 1.0 ['ENSG00000185220|ENST00000329291|PGBD2'] 128002 13094 VPIFTEEF True PC9_epitope_Rep5 980.4854988929999 980.48440993586 55.37 2 -0.9477284603808515 0.2910978423123897 1.0 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'nc|ENSG00000064961|Q9P0W2-2|HMG20B'] 25039 18948 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 77.846 2 -0.947799476356027 0.2911267013149146 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15689 9520 EAVFSALVT True PC9_epitope_Rep4 935.4963979298699 935.49530993586 44.229 2 -0.9478231072104615 0.2911267013149146 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC', 'LRPPRC|p.M465Ifs*9|1|0.25|ENSG00000138095|chr2:43963681-43963682|-/A|frameshift_variant', 'LRPPRC|p.P369Qfs*13|1|0.21|ENSG00000138095|chr2:43974199-43974199|G/-|frameshift_variant'] 248 17390 AAGAPNLVLAA True PC9_epitope_Rep6 966.5498304850599 966.54872993586 79.505 2 -0.9478265099903879 0.2911267013149146 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 41271 19132 HVNLTLRRK True H1975_Epitope_Rep2 1135.6938093801498 1135.6921649037902 79.41 3 -0.9479602708859816 0.2911363204602817 1.0 ['MAGI1|p.V893L|1|0.46|ENSG00000151276|chr3:65381901-65381901|C/G|missense_variant'] 94988 19185 RTQTRRRPLLE True NCI_RA007_Epitope_Rep3 1424.8324281112798 1424.8307849037901 83.764 3 -0.9479967931476883 0.2911691272253582 1.0 ['PTPRC|p.S102Yfs*65|1|0.1|ENSG00000081237|chr1:198699570-198699570|C/-|frameshift_variant'] 12259 11386 DIKLARRRVEH True H1975_Epitope_Rep1 1391.81096439071 1391.8098699358602 48.775 2 -0.9480096111666806 0.2911691272253582 1.0 ['AIFM1|p.G448A|1|0.32|ENSG00000156709|chrX:130133418-130133418|C/G|missense_variant'] 139837 6717 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.3921149679301 31.248 1 -0.9481564744544267 0.29119231447684435 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 5334 5555 ALRGRAARPEP True NCI_RA007_Epitope_Rep2 1192.6788875919997 1192.67725490379 26.222 3 -0.948195117094231 0.29120759837177745 1.0 ['ENST00000254584.6_1_11:6501650-6502526:-|nuORF'] 42057 22372 IDKKPYEKNVR True PC9_epitope_Rep6 1388.7775985737599 1388.77650993586 99.024 2 -0.9482140973054654 0.29120759837177745 1.0 ['CLEC6A|p.T155K|1|0.41|ENSG00000205846|chr12:8476219-8476219|C/A|missense_variant'] 28349 3948 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 20.448 2 -0.94828351665107 0.29120759837177745 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 80259 4977 PGCCGCCGSC True H1975_Epitope_Rep3 888.20567202208 888.20456993586 24.272 2 -0.9483079726691613 0.2912268323790399 1.0 ['ENSG00000186860|ENST00000334202|KRTAP17-1'] 92401 10822 RLPTPEQI True PC9_epitope_Rep5 952.5341804209199 952.53308993586 46.616 2 -0.9483118588085413 0.2912268323790399 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 81141 23109 PKGKAPLRARS True PC9_epitope_Rep3 1179.72002412799 1179.71836490379 94.156 3 -0.9483335554041391 0.2912324975577988 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 119439 12097 VAQTSLVV True PC9_epitope_Rep6 815.4752685624699 815.47416993586 57.86 2 -0.9483373578113345 0.2912324975577988 1.0 ['ENST00000479598.5_1_2:190437559-190445261:-|nuORF', 'SLC40A1|p.S436Lfs*17|1|0.11|ENSG00000138449|chr2:189563681-189563681|C/-|frameshift_variant', 'ENSG00000138449|ENST00000261024|SLC40A1'] 112883 12200 TLKNGTFEKE True PC9_epitope_Rep2 1165.59790287629 1165.5962549037902 52.238 3 -0.9483517157466531 0.2912421138321688 1.0 ['ENST00000590008.5_1_19:38161161-38167293:-|nuORF'] 116388 24821 TTICLKWKNIE True H1975_Epitope_Rep2 1347.7220578435897 1347.72040490379 102.04 3 -0.9483712759243502 0.2912652972620954 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.W489*|1|0.16|ENSG00000081237|chr1:198718109-198718109|G/-|frameshift_variant'] 75718 25705 NLKVILLG True NCI_RA007_Epitope_Rep1 868.5745886809199 868.57348993586 106.39 2 -0.9484572734932136 0.29132127691326704 1.0 ['nc|ENSG00000177674|Q6RW13-2|AGTRAP', 'ENSG00000177674|ENST00000314340|AGTRAP', 'ENST00000494437.1_1_1:11796265-11805895:+|nuORF', 'ENST00000491346.5_1_1:11796265-11806023:+|nuORF', 'nc|ENSG00000177674|Q6RW13-3|AGTRAP', 'nc|ENSG00000177674|Q6RW13-5|AGTRAP'] 106075 5031 STAPEIKAP True PC9_epitope_Rep1 912.4916469025999 912.49054993586 24.211 2 -0.9484789906159465 0.29132127691326704 1.0 ['ENSG00000088038|ENST00000221232|CNOT3'] 83015 8183 PSHLSELTSLK True NCI_RA007_Epitope_Rep2 1210.65575210558 1210.65464993586 36.466 2 -0.9484895169322622 0.29132127691326704 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 105065 3325 SRDQNRRYDQR True NCI_RA007_Epitope_Rep1 1492.72433421428 1492.72267490379 16.829 3 -0.9485438239536127 0.29132693899146667 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'RIMS2|p.S809Kfs*25|1|0.17|ENSG00000176406|chr8:103975486-103975487|-/A|frameshift_variant', 'nc|ENSG00000176406|Q9UQ26-5|RIMS2', 'RIMS2|p.D103Tfs*15|1|0.34|ENSG00000176406|chr8:103885480-103885480|G/-|frameshift_variant', 'nc|ENSG00000176406|Q9UQ26-4|RIMS2'] 119230 12528 VALAIGCVRNL True PC9_epitope_Rep6 1127.64849898051 1127.6474099358602 59.622 2 -0.9485495740348812 0.29132693899146667 1.0 ['nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'USP9Y|p.W2351Cfs*39|1|0.47|ENSG00000114374|chrY:12847315-12847315|G/-|frameshift_variant', 'ENSG00000114374|ENST00000338981|USP9Y'] 137880 14255 YETYVEKY True H1975_Epitope_Rep2 1093.4967918526897 1093.4956899358601 59.982 2 -0.9486733043125454 0.2913908183199479 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-4|DNAH12'] 123958 9025 VGRWIRTQQH True PC9_epitope_Rep4 1279.68978662887 1279.68868993586 42.288 2 -0.9487687125455283 0.2914411297871474 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 17046 9048 EGFGLSGS True NCI_RA007_Epitope_Rep5 752.33408363204 752.3335349679301 41.461 1 -0.9487873830055802 0.2914507420571398 1.0 ['ENST00000586759.1_1_19:2476166-2476346:+|nuORF'] 24811 8465 FAVAIMMT True PC9_epitope_Rep3 882.43433235062 882.43322993586 37.523 2 -0.9487951496493641 0.2914603540663366 1.0 ['KCNH1|p.I486T|1|0.04|ENSG00000143473|chr1:210919645-210919645|A/G|missense_variant'] 101553 9324 SLLHDVGP True PC9_epitope_Rep2 836.43921740692 836.43812993586 41.203 2 -0.9488276231026344 0.2914699658147485 1.0 ['ENSG00000196872|ENST00000397899|CRACDL'] 130856 6270 VTCGSVLK True NCI_RA007_Epitope_Rep1 805.4367748787699 805.43566993586 28.42 2 -0.9489136510474706 0.29149484536082476 1.0 ['ENST00000466935.1_1_22:21996661-21997389:+|nuORF', 'ENSG00000128228|ENST00000248958|SDF2L1'] 69009 11098 LTPSSKLTV True PC9_epitope_Rep3 944.55424715916 944.55314993586 47.685 2 -0.9489197524017554 0.29149484536082476 1.0 ['ZXDB|p.S747Cfs*17|1|0.09|ENSG00000198455|chrX:57594287-57594288|AG/-|frameshift_variant', 'ENSG00000198455|ENST00000374888|ZXDB', 'ENSG00000198205|ENST00000358697|ZXDA'] 25042 19417 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 79.682 2 -0.9489287701699023 0.29149484536082476 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 29835 9214 FVSFIHLMLR True PC9_epitope_Rep4 1261.7005345533698 1261.69888490379 43.04 3 -0.9489381063033738 0.29149484536082476 1.0 ['ENSG00000214711|ENST00000403897|CAPN14', 'nc|ENSG00000214711|A8MX76-2|CAPN14'] 72746 1567 MNMKKSHEVQA True NCI_RA007_Epitope_Rep1 1301.62202653249 1301.62039490379 8.282 3 -0.9490208391747668 0.29151802064540633 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 111886 9364 TIPEAEIPPA True NCI_RA007_Epitope_Rep5 1036.5440763982797 1036.5429699358601 42.66 2 -0.9490908593291999 0.2915276308293318 1.0 ['ENSG00000145309|ENST00000273936|CABS1', 'CABS1|p.S210Y|1|0.25|ENSG00000145309|chr4:70335668-70335668|C/A|missense_variant'] 25043 19502 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 80.02 2 -0.9491366684864001 0.2915372407525467 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 101559 10175 SLLHVPWR True H1975_Epitope_Rep3 1006.57123463598 1006.57012993586 44.183 2 -0.9492348259768899 0.2915604145190169 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'ENST00000464728.5_1_16:838721-840735:+|nuORF', 'ENST00000479976.5_1_16:838624-840569:+|nuORF'] 138925 25578 YKKKINPIK True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 103.4 2 -0.9492661203170074 0.2915773769157738 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 13926 4145 DQYKFCYEVAL True H1975_Epitope_Rep3 1377.62748875241 1377.62584490379 21.064 3 -0.9492924551905181 0.2915773769157738 1.0 ['nc|ENSG00000173482|P28827|PTPRM', 'ENSG00000173482|ENST00000580170|PTPRM', 'ENST00000580949.1_1_18:8399820-8406157:+|nuORF'] 95215 2757 RVKVLLVLNLI True H1975_Epitope_Rep1 1278.8751277870597 1278.87402993586 14.167 2 -0.949294851183467 0.2915773769157738 1.0 ['ENSG00000185274|ENST00000333538|GALNT17'] 851 16175 ADDPEAVIY True H1975_Epitope_Rep3 991.4498416602698 991.4492949679301 67.674 1 -0.949347576090146 0.2915773769157738 1.0 ['nc|ENSG00000197444|Q9ULD0-3|OGDHL', 'nc|ENSG00000197444|Q9ULD0-2|OGDHL', 'ENSG00000197444|ENST00000374103|OGDHL'] 60577 15215 LHGLASLL True PC9_epitope_Rep1 822.4963383602201 822.49524993586 63.345 2 -0.9494070485054149 0.2915773769157738 1.0 ['ENSG00000183134|ENST00000332539|PTGDR2'] 110540 13227 TFMDVAIEFSQ True H1975_Epitope_Rep1 1286.58528958726 1286.5841899358602 55.975 2 -0.9494195647466663 0.2915773769157738 1.0 ['nc|ENSG00000167554|Q8N9Z0-2|ZNF610', 'ENSG00000167554|ENST00000403906|ZNF610'] 47466 10121 IVPAQEVP True PC9_epitope_Rep2 851.47526856247 851.47416993586 44.269 2 -0.9494872478962679 0.2916276735701401 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 138929 25580 YKKKINPIK True PC9_epitope_Rep5 1130.7175645164998 1130.71646993586 103.7 2 -0.9495157597700684 0.2916429327040443 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 128237 11234 VPNRVLAP True PC9_epitope_Rep1 864.5181364339599 864.51702993586 48.091 2 -0.9495258627798743 0.2916429327040443 1.0 ['SPANXN3|p.K59Rfs*5|1|0.66|ENSG00000189252|chrX:143509067-143509067|C/-|frameshift_variant', 'ENSG00000189252|ENST00000370503|SPANXN3'] 4522 17932 AKGKPELQTS True H1975_Epitope_Rep2 1057.5767735088898 1057.57627496793 74.298 1 -0.9495290121208173 0.2916429327040443 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2'] 25045 19670 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 80.704 2 -0.9495573857896084 0.2916485841380059 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 36296 9028 GVEEKMFSL True PC9_epitope_Rep1 1038.5055827145798 1038.5044899358602 39.576 2 -0.9495607681963295 0.2916485841380059 1.0 ['ENSG00000272333|ENST00000420124|KMT2B'] 67680 19358 LSWERPRRP True PC9_epitope_Rep1 1195.6574238714297 1195.6557749037902 79.268 3 -0.9496006189383501 0.29165423526539913 1.0 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 111567 5255 TIATPFDGTHS True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 25.281 3 -0.9496049454554909 0.29165423526539913 1.0 ['KCNH8|p.R21P|1|0.24|ENSG00000183960|chr3:19148781-19148781|G/C|missense_variant'] 132299 19698 VTWVAMTTQ True PC9_epitope_Rep1 1035.50591706775 1035.50480993586 80.594 2 -0.9496621784203534 0.2917316481102266 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.V841Cfs*5|1|0.1|ENSG00000155897|chr8:130836431-130836431|C/-|frameshift_variant', 'ADCY8|p.G246V|1|0.3|ENSG00000155897|chr8:131039597-131039597|C/A|missense_variant'] 71405 15646 LYSRFKAH True PC9_epitope_Rep3 1020.5504991913999 1020.54940993586 65.329 2 -0.9496789978322313 0.2917412530512612 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 66348 6570 LSGDLLDKDP True H1975_Epitope_Rep3 1071.54480467427 1071.54370993586 30.228 2 -0.9497586142224688 0.29181470532396736 1.0 ['ENSG00000196187|ENST00000366835|TMEM63A'] 20355 20425 ENYGLLRR True PC9_epitope_Rep6 1019.5512274673899 1019.55067496793 91.268 1 -0.9497700364595708 0.29181470532396736 1.0 ['nc|ENSG00000125247|Q5T4D3-4|TMTC4', 'nc|ENSG00000125247|Q5T4D3|TMTC4', 'ENSG00000125247|ENST00000342624|TMTC4'] 41726 7691 IALIGSGW True PC9_epitope_Rep5 815.45413919507 815.45304993586 34.527 2 -0.94982502858746 0.29183391191147756 1.0 ['ENSG00000125734|ENST00000264080|GPR108'] 73112 20872 MRKWPRQYEWF True H1975_Epitope_Rep1 1625.79253744525 1625.79144993586 86.728 2 -0.9498679819307634 0.29183391191147756 1.0 ['ENSG00000175874|ENST00000324768|CREG2'] 19868 9825 ELTHIQLGV True PC9_epitope_Rep2 1008.56039516876 1008.55928993586 43.127 2 -0.9499092983068164 0.2918395573997234 1.0 ['ENST00000567409.1_1_16:31368426-31368879:+|nuORF'] 30084 9087 FYIYRLYWWEF True H1975_Epitope_Rep1 1684.8078360728798 1684.8067299358602 39.857 2 -0.9499105446767994 0.2918395573997234 1.0 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 49323 4767 KERKNRERER True PC9_epitope_Rep2 1399.7756415111496 1399.77400490379 23.706 3 -0.9499559051693137 0.2918491599658291 1.0 ['ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'ENST00000466142.1_1_2:170488267-170492739:+|nuORF'] 25867 18104 FFIISKGTV True PC9_epitope_Rep6 1010.5800679841799 1010.57896993586 82.273 2 -0.9500626201060105 0.2919090428344791 1.0 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'ENST00000373975.2_1_10:53806680-53893656:+|nuORF'] 15319 13213 EAFSGEPFNLH True PC9_epitope_Rep1 1246.56185172074 1246.56074993586 55.687 2 -0.9500713317276107 0.2919090428344791 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1'] 25184 26916 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 115.11 2 -0.950093653272121 0.29191637063752474 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 26572 10867 FIKQLGGG True PC9_epitope_Rep2 818.4650382319398 818.46394993586 47.117 2 -0.9500981649545552 0.29191637063752474 1.0 ['SAMHD1|p.Y146F|1|0.17|ENSG00000101347|chr20:36935101-36935101|T/A|missense_variant'] 36678 13554 GVIPYFPYSK True NCI_RA007_Epitope_Rep4 1169.6120963884498 1169.61098993586 59.341 2 -0.950099016022065 0.29191637063752474 1.0 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'nc|ENSG00000141127|O60256-4|PRPSAP2', 'nc|ENSG00000141127|O60256-3|PRPSAP2', 'nc|ENSG00000141127|O60256-2|PRPSAP2', 'ENSG00000141127|ENST00000268835|PRPSAP2'] 133384 23562 VVVGVGLIVG True PC9_epitope_Rep6 910.5851533646199 910.58404993586 103.77 2 -0.9501137879375094 0.29191637063752474 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 36368 17862 GVFEGVLQ True PC9_epitope_Rep3 847.4439684341899 847.44286993586 73.905 2 -0.95011585452342 0.29191637063752474 1.0 ['EXD1|p.Q205Rfs*4|1|0.07|ENSG00000178997|chr15:41191519-41191519|G/-|frameshift_variant', 'EXD1|p.N386*|1|0.03|ENSG00000178997|chr15:41184320-41184321|TC/-|frameshift_variant', 'ENSG00000178997|ENST00000458580|EXD1'] 133381 25622 VVVGVGLIVG True PC9_epitope_Rep5 910.5851533646199 910.58404993586 103.89 2 -0.9501286042376683 0.291922013124356 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 129815 27272 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 111.44 2 -0.9501291204900584 0.291922013124356 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 80667 15520 PGTGYTGL True PC9_epitope_Rep6 764.37046914076 764.36936993586 71.874 2 -0.950151896484273 0.2919293393527745 1.0 ['ENSG00000029559|ENST00000226284|IBSP'] 100777 5021 SLEEDPWPR True NCI_RA007_Epitope_Rep4 1127.5247379360299 1127.52310490379 25.799 3 -0.9501538262590529 0.2919293393527745 1.0 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 84317 8248 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 36.667 2 -0.9501551445686748 0.2919293393527745 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 37263 22142 GVRRIDREEK True PC9_epitope_Rep6 1256.6949315789595 1256.69437496793 98.112 1 -0.9501630581232676 0.2919293393527745 1.0 ['ENSG00000144655|ENST00000273153|CSRNP1'] 140961 4765 YSFFRRCWDYH True H1975_Epitope_Rep3 1578.6826526430998 1578.6810149037901 23.454 3 -0.9502248802533312 0.2919293393527745 1.0 ['ENST00000308982.11_1_3:128631468-128631576:+|nuORF'] 36146 7618 GVAQDDVR True H1975_Epitope_Rep3 858.4195445915 858.4184499358599 34.283 2 -0.9502398192097739 0.29193893874894933 1.0 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70-2|COL6A5'] 29514 8219 FVFWQDIRWK True NCI_RA007_Epitope_Rep2 1423.7400908662296 1423.7384549037902 36.608 3 -0.9503108095856199 0.29205303400032534 1.0 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6'] 133374 25693 VVVGVGLIVG True PC9_epitope_Rep1 910.5851533646199 910.58404993586 103.86 2 -0.9503271795905304 0.29205303400032534 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 75372 24922 NISVPGLQ True NCI_RA007_Epitope_Rep5 826.45486747106 826.45376993586 103.36 2 -0.9503796520545829 0.2920818252063931 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF', 'nc|ENSG00000131023|O95835-2|LATS1'] 63723 19949 LNDAYDLV True PC9_epitope_Rep3 921.4443623570099 921.44326993586 81.977 2 -0.9503916310002676 0.2920818252063931 1.0 ['ENSG00000130829|ENST00000342782|DUSP9'] 4378 12321 AIMDPLPLR True NCI_RA007_Epitope_Rep5 1024.57393705792 1024.57282993586 54.043 2 -0.9504541569669898 0.2920818252063931 1.0 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 69212 11169 LTSLSEEQI True PC9_epitope_Rep2 1018.5182555732599 1018.51714993586 48.286 2 -0.9504692830764597 0.2920914217546904 1.0 ['nc|ENSG00000186231|Q96NJ5-3|KLHL32', 'nc|ENSG00000186231|Q96NJ5-2|KLHL32', 'ENSG00000186231|ENST00000369261|KLHL32'] 101153 8126 SLGRTGVL True PC9_epitope_Rep3 801.4708518883699 801.46974993586 36.233 2 -0.95057654980556 0.2920930989142075 1.0 ['ENST00000261191.11_1_12:27089722-27091093:-|nuORF'] 13662 12149 DPQAWPSRY True NCI_RA007_Epitope_Rep3 1118.5145076055 1118.5134099358602 54.904 2 -0.950577313609084 0.2920930989142075 1.0 ['ENSG00000182636|ENST00000649030|NDN'] 100752 20605 SLEAMPVPAA True PC9_epitope_Rep4 984.4950180308798 984.49392993586 87.411 2 -0.9506413130866631 0.2920930989142075 1.0 ['nc|ENSG00000147394|O15231-9|ZNF185'] 110315 7436 TETAENLKENS True H1975_Epitope_Rep3 1234.56772494682 1234.5666299358602 33.581 2 -0.9506842045922949 0.2920947759373221 1.0 ['ENSG00000117000|ENST00000372771|RLF'] 30814 8351 GAPAETAVAA True PC9_epitope_Rep5 856.4290466460399 856.4279499358599 37.063 2 -0.9506860570486012 0.2920947759373221 1.0 ['ENST00000573331.5_1_17:7297739-7306647:-|nuORF'] 74312 7571 NELFSHEIQP True H1975_Epitope_Rep1 1212.5775017848798 1212.57640993586 34.112 2 -0.9507201992665647 0.2920947759373221 1.0 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 127180 14211 VLVIHHVP True PC9_epitope_Rep3 912.55452194268 912.55342993586 59.749 2 -0.9507454012148263 0.2921043713995256 1.0 ['nc|ENSG00000163218|Q96LB8-2|PGLYRP4', 'ENSG00000163218|ENST00000359650|PGLYRP4'] 112852 4993 TLKDTEQYERE True PC9_epitope_Rep5 1410.66268796082 1410.66103490379 24.238 3 -0.9508396849875301 0.29211335944594286 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 133218 12524 VVSIQDITVNY True H1975_Epitope_Rep2 1249.65541775241 1249.65432993586 53.267 2 -0.9508452038967056 0.29211335944594286 1.0 ['ENSG00000156232|ENST00000286760|WHAMM'] 27297 19013 FLRFEKGPLG True PC9_epitope_Rep1 1162.6498788794997 1162.6482449037899 77.922 3 -0.9508721841236341 0.29211335944594286 1.0 ['WDPCP|p.R468K|1|0.09|ENSG00000143951|chr2:63404080-63404080|C/T|missense_variant'] 25047 20219 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 82.854 2 -0.9508798159093422 0.29211335944594286 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 100071 23261 SIRRVYTRL True PC9_epitope_Rep4 1162.69347502698 1162.69183490379 97.727 3 -0.9509000755126528 0.29211335944594286 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 87856 13372 QRHFYKRL True PC9_epitope_Rep4 1146.6410455313 1146.63940490379 59.339 3 -0.9509050640348223 0.29211335944594286 1.0 ['ENST00000468148.5_1_6:57075047-57075092:-|nuORF'] 121395 5964 VEVSGDPELQP True NCI_RA007_Epitope_Rep2 1168.5611830143998 1168.56008993586 27.809 2 -0.9509203881508068 0.29211335944594286 1.0 ['chr7:97966977-97969770|493|23.45|0.0|21.16|-|2|None,CCZ1P1|2'] 99628 19929 SIFLSSFRVP True PC9_epitope_Rep3 1151.63389446219 1151.63278993586 81.9 2 -0.9509241197625165 0.29211335944594286 1.0 ['nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1019Efs*12|1|0.21|ENSG00000139734|chr13:59810896-59810896|T/-|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3'] 22597 6685 ETLLHQVEELR True H1975_Epitope_Rep2 1365.7252286477299 1365.72358490379 30.624 3 -0.9509730056779436 0.29213650655968776 1.0 ['CEP128|p.Q875Rfs*7|1|0.32|ENSG00000100629|chr14:80743257-80743257|T/-|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-1|CEP128', 'ENSG00000100629|ENST00000555265|CEP128', 'CEP128|p.E389Vfs*20|1|0.4|ENSG00000100629|chr14:80831186-80831187|-/A|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-3|CEP128'] 119190 22189 VAKKEPDGI True PC9_epitope_Rep1 955.5338460677498 955.53274993586 90.169 2 -0.9509943305747961 0.2921732059361659 1.0 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 44121 12298 IIQFIRHWRQW True H1975_Epitope_Rep3 1581.8680853440098 1581.8669899358601 52.485 2 -0.9510425624865193 0.2921827989049413 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 56079 8180 LATKMEYFYWR True NCI_RA007_Epitope_Rep2 1506.7329568804598 1506.73184993586 36.454 2 -0.9510823292746653 0.29219239161369887 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 83814 23173 PVLLHLPRM True PC9_epitope_Rep2 1074.63720602082 1074.63610993586 94.62 2 -0.9511252743374913 0.29221157625120275 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 126740 24806 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 107.26 3 -0.9511367481458982 0.29221157625120275 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 36203 13944 GVCGRFLSSTV True PC9_epitope_Rep6 1124.5648289261999 1124.56372993586 65.484 2 -0.9512160831810745 0.2922211681799702 1.0 ['TREML1|p.R203T|1|0.38|ENSG00000161911|chr6:41150274-41150274|C/G|missense_variant'] 88689 8739 QTFLDIPLHEK True H1975_Epitope_Rep1 1339.7136013348697 1339.71250993586 38.543 2 -0.9513131911452598 0.29228663576984576 1.0 ['ENSG00000253710|ENST00000521508|ALG11'] 110446 20111 TFCMRYMI True PC9_epitope_Rep2 1063.46531520907 1063.46420993586 82.765 2 -0.9513179981614553 0.29228663576984576 1.0 ['ZNF644|p.I882Mfs*40|1|0.08|ENSG00000122482|chr1:90938654-90938708|CTGACCTTCCACTTTGCTCTTAAATAAAGGGAATAAATTTACATGCTCTTGATTA/-|frameshift_variant', 'ENST00000370440.5_1_1:91404092-91404140:-|nuORF'] 129921 24580 VRSVLSLS True PC9_epitope_Rep5 859.51271670035 859.51160993586 99.66 2 -0.9513336676124794 0.29228663576984576 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 17165 21910 EGRKRWKRK True H1975_Epitope_Rep2 1242.7421565548996 1242.74050490379 90.597 3 -0.9513407895752595 0.29228663576984576 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 98137 7887 SESLRILAHT True H1975_Epitope_Rep1 1125.61422164677 1125.6131299358601 35.289 2 -0.951366932689878 0.29229622603157396 1.0 ['ENSG00000179564|ENST00000316436|LSMEM2'] 116874 17535 TVEYRPII True PC9_epitope_Rep4 989.5545815123298 989.55348993586 75.461 2 -0.9514117736808754 0.2923114447546004 1.0 ['ENST00000455183.1_1_3:195408438-195412772:+|nuORF', 'ENST00000440850.5_1_3:195690208-195698253:-|nuORF'] 114404 8439 TPTEEASLP True H1975_Epitope_Rep1 943.4498416602698 943.4492949679301 37.387 1 -0.9514186350153867 0.2923114447546004 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 58882 11519 LETAITC[Carbamidomethyl]LSTV True PC9_epitope_Rep1 1206.6165899949701 1206.61548993586 49.186 2 -0.9514368511904764 0.2923114447546004 1.0 ['ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 25048 20493 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 83.933 2 -0.9515434913043159 0.2923537621441444 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 102291 12453 SLSLSWMVP True PC9_epitope_Rep1 1018.51575347546 1018.51464993586 52.767 2 -0.9515759078277743 0.2923537621441444 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB'] 12875 21749 DLIAARRSKLV True PC9_epitope_Rep5 1240.7615545868002 1240.7604499358602 88.686 2 -0.951598914417303 0.2923537621441444 1.0 ['SPATA31A6|p.M1072I|1|0.07|ENSG00000185775|chr9:42188918-42188918|G/A|missense_variant'] 12332 5625 DIQQKIAT True NCI_RA007_Epitope_Rep5 915.5025459394699 915.50144993586 28.325 2 -0.9516253077880968 0.292363350586705 1.0 ['ENST00000496105.1_1_3:113169108-113212968:-|nuORF', 'ENSG00000163611|ENST00000295872|SPICE1'] 63804 6445 LNGTKPVPP True H1975_Epitope_Rep3 921.5283667644899 921.52726993586 29.765 2 -0.9518599919074364 0.29245027369790255 1.0 ['nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1'] 9792 18891 AYKFQRKRRHK True NCI_RA007_Epitope_Rep1 1516.8851323904798 1516.88402993586 77.625 2 -0.9519053721130981 0.29245027369790255 1.0 ['ENSG00000214376|ENST00000409977|VSTM5'] 137767 7859 YENRPLLIK True NCI_RA007_Epitope_Rep5 1144.6604435631998 1144.65880490379 36.926 3 -0.9520291553047329 0.2924869588781248 1.0 ['ENSG00000100558|ENST00000216446|PLEK2'] 116006 6976 TSLGNIVR True PC9_epitope_Rep1 858.49231560894 858.49120993586 31.639 2 -0.952087784200744 0.2925236430642495 1.0 ['ENST00000607315.1_1_8:30013391-30013664:-|nuORF', 'nc|ENSG00000162493|Q86YL7-2|PDPN'] 133249 246 VVTKEKLLLE True NCI_RA007_Epitope_Rep2 1170.72237511342 1170.72073490379 1.3715 3 -0.9522260703980883 0.2925467774059371 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 36387 5216 GVFHVVTGL True PC9_epitope_Rep2 927.5178020807899 927.51670993586 25.453 2 -0.952273389672273 0.2925563624539345 1.0 ['STAB1|p.S2079Mfs*27|1|0.08|ENSG00000010327|chr3:52521915-52521933|AGCCTGGGCTATGAAGGGG/-|frameshift_variant', 'ENSG00000010327|ENST00000321725|STAB1', 'nc|ENSG00000010327|Q9NY15-2|STAB1', 'ENST00000481607.1_1_3:52529402-52542549:+|nuORF'] 64396 10679 LPLRLNAEPV True H1975_Epitope_Rep1 1120.6604435632 1120.65934993586 46.037 2 -0.9522925052786488 0.29256198347107437 1.0 ['ENST00000355221.7_3_8:54628441-54628540:-|nuORF'] 113162 12707 TLPPTNVTL True NCI_RA007_Epitope_Rep5 954.53859709502 954.53750993586 55.541 2 -0.9523233337346774 0.29256198347107437 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 23989 5367 EYMGFIMEKEQ True NCI_RA007_Epitope_Rep1 1403.61012443611 1403.60902993586 24.955 2 -0.952342261013219 0.2925715679234802 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A', 'nc|ENSG00000168026|Q8NDW8-3|TTC21A'] 128258 6765 VPPFSAFSPQG True NCI_RA007_Epitope_Rep3 1132.5553097883198 1132.5536549037902 33.704 3 -0.9523904116266437 0.29257718830016394 1.0 ['nc|ENSG00000086205|Q04609-6|FOLH1', 'nc|ENSG00000086205|Q04609-3|FOLH1', 'nc|ENSG00000086205|Q04609-9|FOLH1', 'nc|ENSG00000086205|Q04609-8|FOLH1', 'nc|ENSG00000086205|Q04609-7|FOLH1', 'ENSG00000086205|ENST00000256999|FOLH1', 'ENST00000529646.5_1_11:49214323-49229873:-|nuORF', 'nc|ENSG00000086205|Q04609-4|FOLH1'] 42281 9925 IDTVLRIEHVP True H1975_Epitope_Rep1 1290.72958575218 1290.7284899358601 43.112 2 -0.9523981261988018 0.29257718830016394 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ATG2B|p.E1224Dfs*7|1|0.12|ENSG00000066739|chr14:96313406-96313407|-/A|frameshift_variant'] 56525 8629 LDFWRMIWEY True H1975_Epitope_Rep2 1457.68019303161 1457.67853490379 38.148 3 -0.9524545744837921 0.2925788446949171 1.0 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-3|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-5|PTPN22'] 55732 18673 LALPGTVLQQ True PC9_epitope_Rep4 1038.60734536118 1038.6062499358602 79.906 2 -0.9525190308809511 0.2925788446949171 1.0 ['ENST00000555220.5_1_14:64971335-64971530:-|nuORF'] 25050 20897 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 85.526 2 -0.9525233197604722 0.2925788446949171 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 10964 4714 DAINKNQVP True NCI_RA007_Epitope_Rep5 997.51925863277 997.51816993586 24.817 2 -0.9525270247622413 0.2925844644937549 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'DMKN|p.S385Afs*89|1|0.23|ENSG00000161249|chr19:35502869-35502869|G/-|frameshift_variant', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 43733 13037 IHEQMNCKEYQ True H1975_Epitope_Rep1 1421.60677039117 1421.60566993586 55.232 2 -0.9525355461172639 0.2925844644937549 1.0 ['ENSG00000125826|ENST00000356286|RBCK1', 'nc|ENSG00000125826|Q9BYM8-3|RBCK1', 'ENST00000468272.1_1_20:402858-409338:+|nuORF'] 37188 5528 GVQSRWRRE True PC9_epitope_Rep3 1172.61628733544 1172.61463490379 26.343 3 -0.9525510914019831 0.2925900839880791 1.0 ['ENST00000432521.2_1_1:2484838-2485120:-|nuORF'] 124184 15627 VGSVWFVL True PC9_epitope_Rep3 905.5010893874899 905.49998993586 65.257 2 -0.9526562328652142 0.2925900839880791 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10'] 14520 14634 DTLSQLKHYFI True NCI_RA007_Epitope_Rep1 1363.7136013348697 1363.71250993586 60.975 2 -0.9526775165936648 0.29259570317791445 1.0 56288 4541 LDAGRCPEPP True H1975_Epitope_Rep3 1053.49132963277 1053.49022993586 22.587 2 -0.9527220757001118 0.29259570317791445 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 110885 7486 TGSQQQAWP True PC9_epitope_Rep5 1001.4566583762098 1001.45556993586 33.745 2 -0.9527912124308747 0.29261883152946916 1.0 ['ENSG00000087510|ENST00000201031|TFAP2C'] 141186 4984 YSVGSESDSSK True NCI_RA007_Epitope_Rep5 1144.48841199696 1144.48675490379 25.875 3 -0.9528822481333011 0.2926650863528615 1.0 ['ENSG00000162105|ENST00000601538|SHANK2'] 30454 17242 GAFLVIPLHQ True H1975_Epitope_Rep3 1093.62841515893 1093.62787496793 71.963 1 -0.952889222531873 0.2926650863528615 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 123722 24362 VGRFKNRKDR True PC9_epitope_Rep3 1274.73198579402 1274.7308899358602 99.024 2 -0.9529340311803521 0.292674667461328 1.0 ['ENSG00000254535|ENST00000421491|PABPC4L'] 26775 5311 FKKQQRKFQY True PC9_epitope_Rep3 1399.77245362367 1399.7707949037901 25.505 3 -0.9529485753611067 0.29268028390312617 1.0 ['ENSG00000146834|ENST00000310512|MEPCE'] 19 11495 AAAAALRAPAQ True H1975_Epitope_Rep1 1009.5668775315298 1009.56578993586 49.2 2 -0.9529634698356627 0.29268028390312617 1.0 ['ENSG00000083828|ENST00000396154|ZNF586', 'nc|ENSG00000083828|Q9NXT0-2|ZNF586'] 19133 7642 ELGPQERR True H1975_Epitope_Rep3 983.51484195867 983.51374993586 34.377 2 -0.9530410291012607 0.29269548021833647 1.0 ['ENST00000527038.6_2_11:118926784-118927823:-|nuORF'] 113612 24699 TLVLVVSS True H1975_Epitope_Rep1 816.4956696538801 816.49456993586 102.32 2 -0.9530441073636086 0.29269548021833647 1.0 ['ENSG00000073464|ENST00000380833|CLCN4', 'nc|ENSG00000073464|P51793-2|CLCN4'] 136086 25460 WRKVLLKG True PC9_epitope_Rep5 998.6389202729798 998.6378299358599 103.17 2 -0.9530916311968604 0.29269548021833647 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 135926 8109 WPTTFSQEV True PC9_epitope_Rep4 1093.50802524273 1093.5069299358602 38.645 2 -0.9531176060818951 0.2927186043991765 1.0 ['ENSG00000166446|ENST00000570137|CDYL2'] 131494 15270 VTKKKKIGKKK True PC9_epitope_Rep6 1284.8969258607997 1284.8952749037899 70.849 3 -0.9531529772664057 0.2927473420464549 1.0 ['nc|ENSG00000116786|Q8IWE5-2|PLEKHM2', 'ENSG00000116786|ENST00000375799|PLEKHM2'] 89930 14736 RCVHLLGG True H1975_Epitope_Rep2 853.4592416588499 853.45814993586 61.843 2 -0.9531626325377192 0.2927473420464549 1.0 ['ENST00000492587.5_1_1:201958137-201969135:+|nuORF', 'ENST00000478617.5_1_1:201952590-201969135:+|nuORF'] 97558 12974 SEESHEQF True PC9_epitope_Rep4 991.38830403287 991.38720993586 57.799 2 -0.9531817847920137 0.2927473420464549 1.0 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS', 'ENST00000571885.1_1_17:79662737-79663393:+|nuORF'] 110905 8257 TGVLPERQK True H1975_Epitope_Rep3 1026.5821932425 1026.58108993586 36.746 2 -0.9532454431283071 0.2927625341964842 1.0 ['ENSG00000164332|ENST00000296786|UBLCP1'] 109666 5911 TEARGETSR True NCI_RA007_Epitope_Rep1 1005.48393575321 1005.48282993586 27.044 2 -0.9532486740372869 0.2927625341964842 1.0 ['KRT74|p.G508Efs*53|1|0.34|ENSG00000170484|chr12:52567036-52567036|C/-|frameshift_variant'] 115157 20571 TRDLVVRLPR True NCI_RA007_Epitope_Rep4 1223.74623887583 1223.7445949037901 89.101 3 -0.9532575585944258 0.2927625341964842 1.0 ['nc|ENSG00000156469|Q96E29-3|MTERF3', 'nc|ENSG00000156469|Q96E29-2|MTERF3', 'ENSG00000156469|ENST00000287025|MTERF3'] 133899 15428 VYHNRQRL True PC9_epitope_Rep3 1084.5890099584399 1084.5879099358601 64.499 2 -0.95328947975608 0.2927816901408451 1.0 ['nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'ACVR1B|p.E165Kfs*69|1|0.19|ENSG00000135503|chr12:51976487-51976487|G/-|frameshift_variant', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 73555 20371 MVRSRHLRKL True NCI_RA007_Epitope_Rep5 1294.7768278114597 1294.7751749037902 85.293 3 -0.9532958273093325 0.2927816901408451 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 116771 3936 TVDPVTNQ True NCI_RA007_Epitope_Rep2 872.4239612656002 872.42286993586 19.946 2 -0.9533290845441744 0.2927873026191057 1.0 ['ENSG00000004799|ENST00000005178|PDK4'] 84073 5376 PWATVNRLQ True NCI_RA007_Epitope_Rep3 1083.58252759567 1083.5814299358601 28.152 2 -0.9533307637671645 0.2927873026191057 1.0 ['ENST00000254508.6_1_3:13358488-13358665:-|nuORF'] 88424 25057 QSPPIVKIL True NCI_RA007_Epitope_Rep5 993.6222671493299 993.6211699358599 103.88 2 -0.9533814191577907 0.2927968798667443 1.0 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3', 'ENST00000506102.5_1_3:125725861-125741959:-|nuORF', 'ENST00000512557.5_1_3:125725252-125741959:-|nuORF', 'nc|ENSG00000114544|Q96GZ6-8|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-4|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-3|SLC41A3'] 82636 7750 PQKYYWWFFQT True H1975_Epitope_Rep1 1592.7452358163196 1592.7441299358602 34.77 2 -0.9534103861276149 0.29281206835847573 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 75354 10152 NISCKASQDI True PC9_epitope_Rep6 1077.5124590001699 1077.51136993586 49.673 2 -0.953429815077146 0.29281206835847573 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 121586 7025 VFEVGFLI True NCI_RA007_Epitope_Rep2 922.5164050984598 922.51530993586 31.948 2 -0.9534655644172666 0.29281206835847573 1.0 ['ENSG00000182963|ENST00000592524|GJC1'] 32491 1747 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 9.231 2 -0.9534818614286205 0.2928272556161898 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 69451 13296 LTYSKNKVLQK True NCI_RA007_Epitope_Rep1 1320.7765359446 1320.77542993586 55.721 2 -0.9535089429924479 0.2928272556161898 1.0 ['ENSG00000179387|ENST00000323570|ELMOD2'] 102112 14325 SLRLHYRMRFY True NCI_RA007_Epitope_Rep1 1540.8085218625602 1540.80742993586 59.76 2 -0.9535157163039907 0.2928272556161898 1.0 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'JAK1|p.D214Rfs*14|1|0.05|ENSG00000162434|chr1:64869318-64869319|-/T|frameshift_variant'] 87094 11255 QNQEQQYPD True H1975_Epitope_Rep2 1148.47343063916 1148.4723299358602 48.337 2 -0.9535415666585234 0.29285037237643874 1.0 ['ENSG00000164256|ENST00000296682|PRDM9', 'PRDM9|p.G433W|1|0.08|ENSG00000164256|chr5:23526385-23526385|G/T|missense_variant', 'PRDM9|p.P444Q|1|0.48|ENSG00000164256|chr5:23526419-23526419|C/A|missense_variant'] 20461 13872 EPIEYYWQRIR True NCI_RA007_Epitope_Rep1 1551.78341223019 1551.7823099358602 57.98 2 -0.9535815642427605 0.29287116647484934 1.0 ['CLMP|p.V163E|1|0.12|ENSG00000166250|chr11:123083748-123083748|A/T|missense_variant'] 14842 16732 DVVKVLSKTTE True NCI_RA007_Epitope_Rep1 1217.68671788069 1217.68617496793 69.207 1 -0.953626177528628 0.29287116647484934 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 142885 14029 YYTQELTKPNI True NCI_RA007_Epitope_Rep4 1368.6925315371195 1368.69142993586 61.246 2 -0.9536636715209603 0.29287116647484934 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 30200 7535 FYQWNYRINSI True PC9_epitope_Rep4 1502.7306483813397 1502.72899490379 36.352 3 -0.9536921825696186 0.29287116647484934 1.0 ['ENST00000261263.4_1_12:72179453-72179861:+|nuORF'] 12496 18880 DKELEVLSLH True H1975_Epitope_Rep1 1181.6292030045702 1181.62810993586 78.726 2 -0.9537191221504416 0.29287116647484934 1.0 ['nc|ENSG00000068078|P22607-4|FGFR3', 'ENSG00000068078|ENST00000440486|FGFR3'] 57516 9360 LEDMLLFP True PC9_epitope_Rep2 976.49395540172 976.49284993586 41.339 2 -0.9538041316716395 0.29289031506830765 1.0 ['ENST00000602772.5_1_X:73289164-73289383:+|nuORF'] 25054 21424 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 87.659 2 -0.9538352934560038 0.29289031506830765 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 126987 8647 VLRSLYMVI True NCI_RA007_Epitope_Rep3 1092.63653731448 1092.6354299358602 41.092 2 -0.9538792780821215 0.29291342847084945 1.0 ['OR52E6|p.L161M|1|0.16|ENSG00000205409|chr11:5841417-5841417|G/T|missense_variant', 'ENSG00000205409|ENST00000329322|OR52E6'] 82195 9963 PNVTKDVAL True PC9_epitope_Rep5 955.5338460677499 955.53274993586 43.298 2 -0.9539791290084858 0.2929827649233019 1.0 ['nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000494614.5_1_3:98520348-98531278:-|nuORF', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 63010 16314 LLPRPLPVP True PC9_epitope_Rep3 1000.6433369470799 1000.64222993586 67.887 2 -0.9539866629689636 0.2929827649233019 1.0 ['nc|ENSG00000241127|Q9NRH1-2|YAE1'] 33935 14558 GLRSFTRQARV True H1975_Epitope_Rep1 1289.7316514408499 1289.7305499358602 61.203 2 -0.9539874655505388 0.2929827649233019 1.0 ['ENSG00000149418|ENST00000278742|ST14'] 102113 14638 SLRLHYRMRFY True NCI_RA007_Epitope_Rep1 1540.8085218625602 1540.80742993586 60.991 2 -0.9540496342005814 0.2930058758224798 1.0 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant', 'JAK1|p.D214Rfs*14|1|0.05|ENSG00000162434|chr1:64869318-64869319|-/T|frameshift_variant'] 100384 10582 SKTYLDGEGCI True H1975_Epitope_Rep3 1184.5383393948398 1184.53724993586 45.774 2 -0.9540680170772295 0.2930154475177017 1.0 ['ENSG00000077514|ENST00000263681|POLD3', 'nc|ENSG00000077514|Q15054-2|POLD3', 'nc|ENSG00000077514|Q15054-3|POLD3', 'ENST00000530163.1_1_11:74340223-74351808:+|nuORF'] 134552 8184 VYSDAQPHI True PC9_epitope_Rep4 1028.49270953176 1028.4916099358602 38.94 2 -0.9541315554030859 0.2930250189537528 1.0 ['nc|ENSG00000068078|P22607-4|FGFR3', 'ENSG00000068078|ENST00000440486|FGFR3', 'nc|ENSG00000066468|P21802-19|FGFR2', 'nc|ENSG00000068078|P22607-3|FGFR3', 'nc|ENSG00000160867|P22455-2|FGFR4', 'ENSG00000160867|ENST00000292408|FGFR4', 'nc|ENSG00000068078|P22607-2|FGFR3', 'nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'FGFR2|p.L776Pfs*8|1|0.06|ENSG00000066468|chr10:121479996-121479997|-/GAGG|frameshift_variant', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000508139.1_1_5:176518793-176520368:+|nuORF'] 25835 19812 FFFFFFFFKQF True PC9_epitope_Rep5 1597.7798304198893 1597.77817490379 81.254 3 -0.9541470421755776 0.29303459013064376 1.0 ['ENST00000468830.1_1_7:131163282-131172484:+|nuORF'] 4229 18625 AIDGLALVGG True PC9_epitope_Rep4 884.4967322830399 884.49562993586 79.718 2 -0.9542641977195387 0.29306493752622814 1.0 ['AUH|p.G185V|1|0.31|ENSG00000148090|chr9:91298028-91298028|C/A|missense_variant'] 25056 21596 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 88.378 2 -0.9542775386913938 0.29306493752622814 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 37716 6869 GVYTRVSQYI True PC9_epitope_Rep4 1184.61897267404 1184.61733490379 33.64 3 -0.9542843974506077 0.29306493752622814 1.0 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7'] 80797 20259 PHLLLGAPAL True PC9_epitope_Rep2 1000.6069514383599 1000.60584993586 83.346 2 -0.9543037941452625 0.29306493752622814 1.0 ['ENSG00000253831|ENST00000454449|ETV3L'] 28691 18738 FSQQQTLPV True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 76.865 2 -0.9543487555350665 0.29306493752622814 1.0 ['nc|ENSG00000165643|Q5JUK2|SOHLH1', 'ENSG00000165643|ENST00000425225|SOHLH1'] 98724 22910 SGGGGGGGGD True NCI_RA007_Epitope_Rep1 676.24124587636 676.24069496793 94.045 1 -0.9543618561751074 0.29306493752622814 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 36897 10141 GVLPGGHL True PC9_epitope_Rep5 748.42317341996 748.42206993586 43.992 2 -0.9543922734979734 0.2930705399807778 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 28740 10794 FSSGYGTDVSR True NCI_RA007_Epitope_Rep1 1174.5254662120199 1174.52436993586 45.98 2 -0.954416548356363 0.2930705399807778 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 67747 12283 LSYHVLQAI True PC9_epitope_Rep4 1042.58113061334 1042.58002993586 55.063 2 -0.9545125308636523 0.29307380987831455 1.0 ['ENST00000502926.1_2_5:140806427-140807822:+|nuORF'] 16966 16767 EFVLDYPKPV True H1975_Epitope_Rep3 1205.6332257558502 1205.6321299358601 70.037 2 -0.9545297304586318 0.29307380987831455 1.0 ['UGT1A8|p.D256E|1|0.35|ENSG00000242366|chr2:233618475-233618475|C/A|missense_variant'] 15259 9614 EAEQLDPGHF True H1975_Epitope_Rep1 1141.50400249145 1141.50290993586 41.906 2 -0.9545587792992669 0.29307380987831455 1.0 ['BEND3|p.V363L|1|0.19|ENSG00000178409|chr6:107070104-107070104|C/G|missense_variant'] 120306 6031 VEDSVECLHAM True H1975_Epitope_Rep3 1231.52130943171 1231.52020993586 28.213 2 -0.9545752832605194 0.29307380987831455 1.0 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1', 'CLTCL1|p.G1209Efs*78|1|0.19|ENSG00000070371|chr22:19201468-19201468|C/-|frameshift_variant'] 24997 25391 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 105.63 2 -0.954586243712958 0.29307380987831455 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 29995 9876 FWWWQDNWLWH True NCI_RA007_Epitope_Rep2 1702.7469671518197 1702.7458699358601 43.041 2 -0.9545886379138956 0.29307380987831455 1.0 ['ENST00000431490.1_1_3:45201441-45201549:-|nuORF'] 13801 12367 DQKIILELDR True NCI_RA007_Epitope_Rep1 1241.6979512707298 1241.6968499358602 52.079 2 -0.954612220616878 0.29308897972442544 1.0 ['ENSG00000128185|ENST00000248879|DGCR6L'] 23131 9229 EVKEILPEAVK True NCI_RA007_Epitope_Rep1 1253.7231033894097 1253.7220099358601 39.897 2 -0.9546352821163983 0.29308897972442544 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF'] 98720 22389 SGGGGGGGGD True H1975_Epitope_Rep1 676.24124587636 676.24069496793 93.151 1 -0.9546481505585181 0.29308897972442544 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 94936 4153 RTHLEEKTI True PC9_epitope_Rep6 1125.61422164677 1125.61258490379 22.899 3 -0.9547011922265802 0.2930962144896937 1.0 ['nc|ENSG00000125846|P52736-2|ZNF133', 'ENSG00000125846|ENST00000425686|ZNF133', 'nc|ENSG00000125846|P52736-5|ZNF133', 'nc|ENSG00000125846|P52736-3|ZNF133', 'nc|ENSG00000125846|P52736-4|ZNF133'] 66082 12965 LSEKEYWDEYK True H1975_Epitope_Rep1 1488.6772753958 1488.6761699358601 54.945 2 -0.954717659051645 0.2930962144896937 1.0 ['CCDC83|p.E138D|1|0.07|ENSG00000150676|chr11:85886270-85886270|G/T|missense_variant'] 77715 11171 NTLERREKHEK True NCI_RA007_Epitope_Rep2 1438.7640737679396 1438.7629699358602 48.033 2 -0.9547494931021335 0.2930962144896937 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 123859 8383 VGRQLMHKA True NCI_RA007_Epitope_Rep4 1038.5756683934198 1038.5745699358602 39.059 2 -0.9547641040157462 0.2930962144896937 1.0 ['nc|ENSG00000158062|Q5T124-4|UBXN11', 'ENSG00000158062|ENST00000374222|UBXN11', 'nc|ENSG00000158062|Q5T124-3|UBXN11', 'nc|ENSG00000158062|Q5T124-8|UBXN11', 'nc|ENSG00000158062|Q5T124-2|UBXN11'] 137420 6036 YEATLEEC[Carbamidomethyl]C[Carbamidomethyl]AK True H1975_Epitope_Rep3 1372.5639030785399 1372.56280993586 28.232 2 -0.9547764917750933 0.2930962144896937 1.0 ['CON__P02769'] 137851 19767 YESGFDTA True PC9_epitope_Rep6 888.350127619 888.34902993586 88.692 2 -0.9548174762251673 0.2930978481526594 1.0 ['ENSG00000171489|ENST00000376940|SPACA5', 'ENSG00000171478|ENST00000304270|SPACA5B'] 98728 21806 SGGGGGGGGD True NCI_RA007_Epitope_Rep3 676.24124587636 676.24069496793 94.739 1 -0.9548574454448897 0.2930978481526594 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 128141 4649 VPLLVKVIKC True PC9_epitope_Rep2 1110.71987301562 1110.71876993586 23.255 2 -0.954872786553025 0.2930978481526594 1.0 ['ENSG00000137040|ENST00000259569|RANBP6'] 25058 21842 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 89.417 2 -0.9549166107353024 0.29310344827586204 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 23894 6167 EYIYQFFEDKR True PC9_epitope_Rep1 1536.7248942945596 1536.7232549037901 28.536 3 -0.9549190109629959 0.29310344827586204 1.0 ['ENSG00000158077|ENST00000299481|NLRP14', 'NLRP14|p.L805Ffs*6|1|0.12|ENSG00000158077|chr11:7057798-7057798|C/-|frameshift_variant', 'NLRP14|p.A488Cfs*22|1|0.17|ENSG00000158077|chr11:7043481-7043482|-/T|frameshift_variant'] 16728 5271 EESLVDDSLLQ True H1975_Epitope_Rep1 1246.5928770655 1246.59178993586 25.339 2 -0.9549535270579931 0.2931186142499492 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 139381 19027 YLMPSPNL True PC9_epitope_Rep1 933.46298962661 933.46188993586 77.978 2 -0.9549677775125444 0.2931186142499492 1.0 ['ENSG00000101134|ENST00000262593|DOK5', 'nc|ENSG00000101134|Q9P104-2|DOK5'] 31275 14670 GDGGCYGD True NCI_RA007_Epitope_Rep5 742.2228189308998 742.22227496793 63.096 1 -0.9549766263876925 0.2931186142499492 1.0 ['nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1'] 112755 16844 TLHLLVLV True PC9_epitope_Rep1 906.59023874506 906.58914993586 69.615 2 -0.9550674846430065 0.2931552452094836 1.0 ['nc|ENSG00000104951|Q96RQ9-2|IL4I1'] 58274 11185 LELRPAEWEK True H1975_Epitope_Rep1 1269.67173652289 1269.67062993586 47.991 2 -0.9551130582777758 0.29316481047945114 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3', 'nc|ENSG00000135298|O60242-2|ADGRB3'] 17031 6815 EGEEHHPV True H1975_Epitope_Rep3 932.3988091469199 932.39770993586 31.167 2 -0.9553317267482688 0.29326116373477673 1.0 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF', 'ENST00000510079.2_1_4:79102321-79102666:-|nuORF'] 113366 11012 TLRTRFKKI True NCI_RA007_Epitope_Rep4 1161.7346115629698 1161.73297490379 49.224 3 -0.9553343285161415 0.29326116373477673 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9'] 130756 15476 VSYLKKISL True PC9_epitope_Rep6 1049.64848189717 1049.64738993586 71.701 2 -0.9553350285350605 0.29326116373477673 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 136144 6873 WRREFWWSES True NCI_RA007_Epitope_Rep3 1467.66838247795 1467.66728993586 34.144 2 -0.9553521435078652 0.2932707270537611 1.0 ['ENST00000529028.1_1_11:12297633-12308767:+|nuORF'] 58106 6399 LEKEVMQYVYY True H1975_Epitope_Rep1 1463.7006536926701 1463.69899490379 29.673 3 -0.955400977945675 0.2932779476632479 1.0 ['STARD3NL|p.D92V|1|0.3|ENSG00000010270|chr7:38214406-38214406|A/T|missense_variant'] 32487 10376 GGDEDFYT True PC9_epitope_Rep5 902.3293921744199 902.32828993586 44.896 2 -0.9554516053020139 0.2932779476632479 1.0 ['CON__Q28065'] 79306 7568 PAQHDQLMQK True PC9_epitope_Rep2 1194.5815416194998 1194.5798849037901 34.481 3 -0.9554524252779838 0.2932779476632479 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF'] 60177 12254 LGPAYLRLGP True H1975_Epitope_Rep1 1055.61276509479 1055.6116699358602 52.158 2 -0.9554615711046061 0.2932779476632479 1.0 ['ENSG00000162461|ENST00000294454|SLC25A34'] 103817 9740 SPWSTSPL True H1975_Epitope_Rep2 873.42323298961 873.4226849679301 42.451 1 -0.9555074098596129 0.2932779476632479 1.0 ['ENSG00000184486|ENST00000328345|POU3F2'] 3511 15633 AGLPSWQYQC True PC9_epitope_Rep6 1151.50697969691 1151.50588993586 72.334 2 -0.9555291188124478 0.29331457101492414 1.0 ['nc|ENSG00000179994|Q495Y7|SPDYE7P'] 140024 9880 YQEFLWRMQR True NCI_RA007_Epitope_Rep2 1455.7081391149497 1455.7070499358601 43.057 2 -0.9555728646974349 0.29332413270552576 1.0 ['ENSG00000242950|ENST00000603053|ERVW-1'] 40002 11902 HPPQHQHHH True PC9_epitope_Rep2 1153.5278066842102 1153.52617490379 51.105 3 -0.9557167484017729 0.29335678527939385 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 32853 23242 GHPGPGPGPT True H1975_Epitope_Rep2 872.4140652882401 872.41296993586 95.868 2 -0.9557192078244933 0.29335678527939385 1.0 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 35574 9823 GTAANSQSYTI True PC9_epitope_Rep3 1111.5145671751502 1111.51346993586 42.744 2 -0.9557495657478599 0.29336796817923533 1.0 ['RBM10|p.V569Yfs*6|1|0.49|ENSG00000182872|chrX:47181961-47181965|CGTCT/-|frameshift_variant', 'RBM10|p.A631Gfs*42|1|0.33|ENSG00000182872|chrX:47182263-47182264|-/G|frameshift_variant', 'RBM10|p.K627Rfs*77|1|0.16|ENSG00000182872|chrX:47182255-47182255|A/-|frameshift_variant', 'RBM10|p.D568Tfs*136|1|0.6|ENSG00000182872|chrX:47181956-47181956|C/-|frameshift_variant', 'RBM10|p.G840Afs*7|1|0.09|ENSG00000182872|chrX:47186152-47186152|G/-|frameshift_variant', 'nc|ENSG00000182872|P98175-2|RBM10', 'ENSG00000182872|ENST00000377604|RBM10', 'nc|ENSG00000182872|P98175-5|RBM10', 'nc|ENSG00000182872|P98175-4|RBM10', 'nc|ENSG00000182872|P98175-3|RBM10'] 135178 9194 WEQLKDDSL True NCI_RA007_Epitope_Rep4 1132.540053647 1132.53894993586 42.209 2 -0.9557516923060076 0.29336796817923533 1.0 ['ENSG00000109101|ENST00000579795|FOXN1'] 83828 20957 PVLQEDHCDS True PC9_epitope_Rep1 1141.47098811101 1141.46988993586 85.434 2 -0.9557585698924532 0.29336796817923533 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 126415 16685 VLKKKKKKKK True PC9_epitope_Rep3 1254.92274668582 1254.9211049037901 69.314 3 -0.9558145221677231 0.29336796817923533 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 28581 6566 FSGDLDDQTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep2 1312.53537955215 1312.5342899358602 30.152 2 -0.9558597474546988 0.2933735591752801 1.0 ['ENSG00000138385|ENST00000260956|SSB', 'ENST00000470621.1_1_2:170665037-170666957:+|nuORF', 'ENST00000438469.2_1_1:146553889-146554591:-|nuORF'] 117069 20141 TVILFLIML True H1975_Epitope_Rep2 1061.65587577673 1061.65476993586 83.464 2 -0.9558597868427104 0.2933735591752801 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 19164 15499 ELHLVHWNAVR True PC9_epitope_Rep4 1372.73640246812 1372.7353099358602 67.542 2 -0.9558805341523495 0.29338311890363516 1.0 ['ENSG00000169239|ENST00000318636|CA5B'] 93409 23280 RQEKKIVLKPK True NCI_RA007_Epitope_Rep3 1365.8820040726498 1365.88090993586 101.12 2 -0.9559142140464258 0.2934022375843829 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 119850 16954 VDESGNPES True NCI_RA007_Epitope_Rep5 932.37231961556 932.37122993586 71.972 2 -0.9559179605841382 0.2934022375843829 1.0 ['ENSG00000177189|ENST00000379565|RPS6KA3'] 105751 7974 SSGERWIRY True H1975_Epitope_Rep3 1152.5676058075198 1152.56650993586 35.644 2 -0.9559679232218934 0.29341738589323885 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 69464 7956 LVADYGHD True PC9_epitope_Rep4 888.39774651776 888.39664993586 38.046 2 -0.9559745375207503 0.29341738589323885 1.0 ['NDUFAF7|p.N362Kfs*5|1|0.34|ENSG00000003509|chr2:37247598-37247599|-/A|frameshift_variant', 'ENSG00000003509|ENST00000002125|NDUFAF7', 'nc|ENSG00000003509|Q7L592-2|NDUFAF7', 'ENST00000419278.2_1_2:37471065-37474467:+|nuORF'] 67206 8916 LSRFLEYRLDW True H1975_Epitope_Rep1 1496.7775985737599 1496.77650993586 39.199 2 -0.9559851155099355 0.29341738589323885 1.0 ['ENST00000554360.5_1_14:58733385-58733508:-|nuORF'] 120511 21663 VEFFEKLLL True PC9_epitope_Rep1 1136.6481475439998 1136.6470499358602 88.155 2 -0.9560394018782862 0.29342856369883397 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant', 'ABCA13|p.V1886Wfs*4|1|0.45|ENSG00000179869|chr7:48275317-48275317|G/-|frameshift_variant'] 31739 5757 GEGSSGFR True H1975_Epitope_Rep1 795.35113067851 795.3505849679301 27.215 1 -0.9560530238403733 0.29342856369883397 1.0 ['ENSG00000135605|ENST00000381501|TEC'] 80494 6776 PGLSSIFLPR True NCI_RA007_Epitope_Rep4 1085.62332977849 1085.62222993586 32.683 2 -0.9560547041506352 0.29342856369883397 1.0 ['nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 19480 7159 ELNVMMHFIY True NCI_RA007_Epitope_Rep2 1295.60425121003 1295.60314993586 32.469 2 -0.956070985631823 0.29342856369883397 1.0 ['ENST00000370382.7_2_1:92546128-92605069:+|nuORF', 'nc|ENSG00000189195|Q5XKL5-4|BTBD8', 'nc|ENSG00000189195|Q5XKL5|BTBD8'] 5347 8819 ALRQFFDRVP True PC9_epitope_Rep1 1247.67749060967 1247.67583490379 38.764 3 -0.9560934296477235 0.2934397402948735 1.0 ['nc|ENSG00000168546|O00451-2|GFRA2', 'nc|ENSG00000168546|O00451-3|GFRA2', 'ENSG00000168546|ENST00000524240|GFRA2', 'ENST00000306793.4_1_8:21550792-21640469:-|nuORF'] 11948 4767 DHNDGLGNAF True NCI_RA007_Epitope_Rep1 1058.44173658806 1058.44117496793 22.622 1 -0.9560957562429828 0.2934397402948735 1.0 ['ENSG00000271447|ENST00000605424|MMP28'] 111961 9752 TIQNGGGD True NCI_RA007_Epitope_Rep4 760.3351462611998 760.33404993586 44.359 2 -0.9561045537549582 0.2934397402948735 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 71885 12264 MENLQQDYELK True NCI_RA007_Epitope_Rep3 1409.64968074897 1409.6485899358602 55.394 2 -0.9561125977305021 0.2934397402948735 1.0 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 25187 306 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 1.7022 2 -0.9561405117102434 0.2934898756949047 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 33031 12779 GIIFTEDYRTR True NCI_RA007_Epitope_Rep1 1369.6990138998897 1369.69790993586 53.696 2 -0.9561729652322809 0.2934994319104042 1.0 ['ENST00000478486.5_1_6:31940188-31947331:+|nuORF', 'ENST00000469907.1_1_6:31940369-31948823:+|nuORF', 'ENST00000463823.5_1_6:31940225-31947331:+|nuORF', 'ENST00000471028.1_1_6:31940339-31947204:+|nuORF', 'ENST00000484540.5_1_6:31940369-31947331:+|nuORF', 'ENST00000466336.5_1_6:31940188-31948320:+|nuORF', 'ENST00000473983.5_1_6:31940188-31947331:+|nuORF', 'ENST00000491861.5_1_6:31940339-31948823:+|nuORF', 'ENSG00000204344|ENST00000685781|STK19', 'nc|ENSG00000204344|P49842-3|STK19', 'ENST00000466132.5_1_6:31939873-31948823:+|nuORF', 'ENST00000492583.5_1_6:31939873-31948823:+|nuORF', 'nc|ENSG00000204344|P49842-2|STK19', 'nc|ENSG00000204344|P49842-1|STK19'] 12119 8561 DIDAPVTAA True H1975_Epitope_Rep1 871.4287122928699 871.42816496793 37.856 1 -0.9562096229880573 0.29350898786739343 1.0 ['nc|ENSG00000138814|Q08209-4|PPP3CA'] 58219 4600 LELGAHAP True NCI_RA007_Epitope_Rep5 806.42865272322 806.42754993586 24.364 2 -0.9562231588958295 0.29353206914274893 1.0 ['ENSG00000119919|ENST00000344586|NKX2-3'] 118979 9907 VAEEGLGPV True H1975_Epitope_Rep3 869.4494477374499 869.4488949679301 43.139 1 -0.956319921059627 0.29355514979373776 1.0 ['ENST00000526977.5_1_8:145649272-145649818:-|nuORF'] 87027 6885 QMRRKHYYRSY True NCI_RA007_Epitope_Rep5 1586.78884904714 1586.78719490379 33.164 3 -0.956430706969395 0.29361880545336505 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 59659 13611 LGAGIRLV True PC9_epitope_Rep5 797.5123227775299 797.51122993586 57.377 2 -0.9565756293572005 0.29366099081675434 1.0 ['nc|nan|Q2M2W7-2|C17orf58', 'ENSG00000186665|ENST00000580729|C17orf58'] 18232 17913 EINTAHCTFA True PC9_epitope_Rep5 1105.4862442523302 1105.4851499358601 73.92 2 -0.9565852300956249 0.29366099081675434 1.0 ['ENST00000261038.5_1_3:122598211-122598370:+|nuORF'] 2966 4676 AFFPVHFQEF True NCI_RA007_Epitope_Rep2 1267.6025943339098 1267.60093490379 22.815 3 -0.9565858774435645 0.29366099081675434 1.0 ['nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'ENSG00000033100|ENST00000035307|CHPF2'] 61964 15701 LLDNIHFSGVK True NCI_RA007_Epitope_Rep1 1241.67682190333 1241.67572993586 65.166 2 -0.9566393002409426 0.29367054368406814 1.0 ['ENSG00000115594|ENST00000410023|IL1R1'] 14105 10781 DSAALDPLQA True H1975_Epitope_Rep2 999.4872897981498 999.48677496793 46.5 1 -0.956739196121511 0.29369362058938886 1.0 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12'] 120029 11926 VDSGARGRPRP True H1975_Epitope_Rep3 1166.6268520191397 1166.62574993586 51.027 2 -0.9568621322126518 0.2937302209840145 1.0 ['ENST00000356387.6_1_7:102088095-102088605:+|nuORF'] 135462 15005 WIEIAYGT True NCI_RA007_Epitope_Rep3 951.4701831820299 951.46908993586 66.486 2 -0.9569063515811118 0.2937318277097843 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1', 'nc|ENSG00000136636|Q9Y597-2|KCTD3', 'ENSG00000136636|ENST00000259154|KCTD3'] 56534 8210 LDGEWGTNP True PC9_epitope_Rep2 987.42977492203 987.42866993586 36.938 2 -0.9569222302973012 0.2937318277097843 1.0 ['ENSG00000146247|ENST00000275034|PHIP'] 133580 18220 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 79.784 3 -0.9569319753800601 0.2937318277097843 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 38273 8236 HEELRRFKESH True NCI_RA007_Epitope_Rep2 1466.7378590201001 1466.7367699358601 36.674 2 -0.9570051439820406 0.29373901284651793 1.0 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF'] 27638 8753 FPEITRRKCFP True H1975_Epitope_Rep1 1392.7336255868 1392.7325299358602 38.599 2 -0.9570187202409858 0.29373901284651793 1.0 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 37965 20136 HAELFPAPIL True PC9_epitope_Rep4 1106.6124307416198 1106.61132993586 85.588 2 -0.957045262990956 0.29373901284651793 1.0 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA'] 66937 11072 LSNVLELGWE True H1975_Epitope_Rep3 1158.5920892198599 1158.59098993586 47.68 2 -0.9570675171315904 0.29373901284651793 1.0 ['ENST00000462680.5_1_1:153955110-153955269:-|nuORF'] 36422 12332 GVFTDIPISNI True PC9_epitope_Rep3 1174.6233893481399 1174.6217549037901 52.463 3 -0.9571046471674873 0.29373901284651793 1.0 ['ENSG00000150768|ENST00000280346|DLAT', 'ENST00000533297.1_1_11:111896132-111933256:+|nuORF'] 91642 19543 RIRFYYEQRLL True PC9_epitope_Rep3 1555.8623312572297 1555.8606749037901 80.405 3 -0.9571082291955597 0.2937445910861099 1.0 ['nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 37616 12896 GVVTSHLSV True PC9_epitope_Rep1 897.4919812557699 897.49088993586 54.477 2 -0.9571215879924311 0.2937445910861099 1.0 ['ENST00000480456.5_1_21:27087792-27087933:+|nuORF'] 133307 25326 VVTVGVITVL True PC9_epitope_Rep2 998.6375828603 998.63648993586 103.09 2 -0.9571616295665799 0.29376690102758246 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 101617 13492 SLLRDGFEI True PC9_epitope_Rep3 1048.5553097883198 1048.5542099358602 56.947 2 -0.9572148385700955 0.29376690102758246 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.A1711Lfs*3|1|0.11|ENSG00000042781|chr1:216084735-216084735|G/-|frameshift_variant', 'USH2A|p.T1098S|1|0.17|ENSG00000042781|chr1:216207297-216207297|T/A|missense_variant'] 84312 8015 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 35.65 2 -0.9572550206100797 0.29376690102758246 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 79218 5182 PAPLRAAPA True PC9_epitope_Rep6 862.5024863698198 862.50138993586 27.68 2 -0.9572633191751246 0.29376690102758246 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 133309 24739 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63648993586 103.66 2 -0.957263627228681 0.29376690102758246 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 83158 10477 PSSDLEACKQL True NCI_RA007_Epitope_Rep1 1189.56488849585 1189.56378993586 44.735 2 -0.9572638015946647 0.29376690102758246 1.0 ['SCN9A|p.G56C|1|0.19|ENSG00000169432|chr2:166311591-166311591|C/A|missense_variant'] 103819 10052 SPWTRFQWRRR True PC9_epitope_Rep6 1574.83309681762 1574.83144490379 49.248 3 -0.9572711602148276 0.29376690102758246 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 46219 6169 ISNHLSFDQTK True NCI_RA007_Epitope_Rep1 1288.6411646706 1288.64006993586 28.032 2 -0.9574010218237444 0.29376690102758246 1.0 ['ENSG00000177483|ENST00000316997|RBM44'] 31953 8054 GENVEALRNLS True PC9_epitope_Rep1 1200.6098645423199 1200.6087699358602 35.801 2 -0.9574236347984919 0.2937701105913528 1.0 ['nc|ENSG00000154265|Q8WWZ7-2|ABCA5', 'ENSG00000154265|ENST00000392676|ABCA5'] 101568 15336 SLLLKDHIL True PC9_epitope_Rep1 1050.6437308699 1050.6426299358602 63.809 2 -0.9574474597406427 0.2937701105913528 1.0 ['ENST00000471841.5_1_3:179066694-179069717:+|nuORF'] 64045 16203 LPALPSPK True H1975_Epitope_Rep1 821.50108938749 821.5005449679301 67.671 1 -0.9574482702029591 0.2937701105913528 1.0 ['ENST00000593284.5_1_19:47987540-47987672:+|nuORF'] 14297 13722 DSVDKLVIQKY True NCI_RA007_Epitope_Rep2 1306.7132669816997 1306.7121699358602 58.021 2 -0.9574616525498884 0.2937701105913528 1.0 ['ENST00000523612.1_1_8:142469282-142469963:+|nuORF'] 11240 6124 DEEKKKSP True H1975_Epitope_Rep3 959.4923751785899 959.49126993586 28.568 2 -0.9574616991219185 0.2937701105913528 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 5406 12396 ALSWLDEELLC True H1975_Epitope_Rep3 1290.61658971554 1290.61548993586 52.87 2 -0.9574697729704074 0.2937701105913528 1.0 ['nc|ENSG00000125447|Q9NZ52-3|GGA3', 'nc|ENSG00000125447|Q9NZ52-4|GGA3', 'nc|ENSG00000125447|Q9NZ52-2|GGA3', 'ENSG00000125447|ENST00000537686|GGA3'] 100838 13290 SLELYHQL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 56.131 2 -0.9574893146138923 0.2937796584963565 1.0 ['ENST00000467320.1_1_16:58550403-58550922:+|nuORF', 'nc|ENSG00000103037|Q8TBK2-2|SETD6', 'ENSG00000103037|ENST00000219315|SETD6'] 141588 10831 YTQLVWANSFY True H1975_Epitope_Rep3 1390.6557521055797 1390.65464993586 46.74 2 -0.957571964631453 0.2938122727088375 1.0 ['nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1', 'ENSG00000173401|ENST00000378695|GLIPR1L1'] 48453 6763 KAAAKALK True PC9_epitope_Rep4 799.5279728416699 799.52686993586 33.213 2 -0.9575817175044259 0.2938122727088375 1.0 ['nc|ENSG00000185946|Q96LT9-2|RNPC3', 'ENSG00000185946|ENST00000423855|RNPC3'] 120930 5464 VENWQGNPIQK True NCI_RA007_Epitope_Rep2 1311.6571490879098 1311.6560499358602 25.871 2 -0.957613421164177 0.29383533865080436 1.0 ['ENSG00000129933|ENST00000262815|MAU2'] 15688 9830 EAVFSALVT True PC9_epitope_Rep2 935.4963979298699 935.49530993586 43.147 2 -0.9576275349063882 0.29385840396912305 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC', 'LRPPRC|p.M465Ifs*9|1|0.25|ENSG00000138095|chr2:43963681-43963682|-/A|frameshift_variant', 'LRPPRC|p.P369Qfs*13|1|0.21|ENSG00000138095|chr2:43974199-43974199|G/-|frameshift_variant'] 19832 12493 ELSRTEQIR True PC9_epitope_Rep3 1130.6043852390599 1130.6027249037902 53.079 3 -0.9576601700401703 0.29388146866381876 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A'] 58662 9490 LERHQLTHSLP True NCI_RA007_Epitope_Rep1 1329.71533267037 1329.7142299358602 40.909 2 -0.9577364854410187 0.2939045327349168 1.0 ['ENSG00000198146|ENST00000356321|ZNF770'] 61609 18848 LKLPVDQKCEH True PC9_epitope_Rep2 1308.68600668804 1308.68437490379 77.867 3 -0.9577511657228922 0.29391010476512336 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 141772 19399 YVAIINKSI True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 79.996 2 -0.9577511979441038 0.29391010476512336 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000593203.1_1_19:10934344-10943016:+|nuORF'] 73213 18534 MSARVRTSHL True NCI_RA007_Epitope_Rep5 1156.61351045412 1156.6124099358601 78.117 2 -0.9577749021152552 0.29391567649404543 1.0 ['ENST00000238714.7_1_2:60988922-60995939:+|nuORF'] 18627 10896 EKVFPDAVDP True H1975_Epitope_Rep3 1115.5498900547097 1115.5487899358602 46.996 2 -0.9577762772777918 0.29391567649404543 1.0 ['ENSG00000132122|ENST00000371847|SPATA6', 'nc|ENSG00000132122|Q9NWH7-2|SPATA6'] 75930 8009 NLSFQKSYG True NCI_RA007_Epitope_Rep4 1042.5083595959 1042.5072699358602 37.573 2 -0.9579260402332267 0.29398883466929804 1.0 ['ENSG00000174948|ENST00000389740|GPR149'] 110068 11178 TELLLLLQP True H1975_Epitope_Rep1 1038.63249747986 1038.6314099358601 47.966 2 -0.9579276078655948 0.29398883466929804 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-2|RUSC1', 'nc|ENSG00000160753|Q9BVN2-3|RUSC1'] 64311 23235 LPKWRCRRA True PC9_epitope_Rep1 1184.6713001137598 1184.67077496793 94.164 1 -0.9579786741400428 0.2939983779399838 1.0 ['ENST00000483635.5_1_1:219347256-219347463:+|nuORF'] 4257 8739 AIDTSNLEKPL True NCI_RA007_Epitope_Rep2 1199.63976768827 1199.6386699358602 38.639 2 -0.9580197687706052 0.29402143793676755 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant', 'ROS1|p.F1354Lfs*35|1|0.3|ENSG00000047936|chr6:117356708-117356708|A/-|frameshift_variant'] 81499 19162 PLGQLEPV True PC9_epitope_Rep2 851.47526856247 851.47416993586 79.08 2 -0.958023780441227 0.2940309805087724 1.0 ['ENST00000484513.1_1_3:38180924-38181542:+|nuORF'] 126537 19802 VLLMFGLLL True H1975_Epitope_Rep2 1017.6296610288898 1017.62856993586 82.146 2 -0.9580672314800744 0.29405403944149333 1.0 ['nc|ENSG00000204544|Q5SSG8-3|MUC21', 'ENSG00000204544|ENST00000376296|MUC21', 'nc|ENSG00000204544|Q5SSG8-2|MUC21'] 16889 14777 EFKQKYDYFRK True H1975_Epitope_Rep1 1550.7881632574597 1550.78706993586 62.064 2 -0.9581420197773363 0.29410413062283736 1.0 ['nc|ENSG00000049759|Q96PU5-3|NEDD4L', 'nc|ENSG00000049759|Q96PU5-2|NEDD4L', 'nc|ENSG00000049759|Q96PU5-6|NEDD4L', 'nc|ENSG00000049759|Q96PU5-5|NEDD4L', 'nc|ENSG00000049759|Q96PU5-7|NEDD4L', 'ENSG00000049759|ENST00000400345|NEDD4L', 'nc|ENSG00000049759|Q96PU5-9|NEDD4L', 'nc|ENSG00000049759|Q96PU5-4|NEDD4L'] 117013 13272 TVHNPGLAL True PC9_epitope_Rep3 920.5079656730799 920.50686993586 56.086 2 -0.9581597840979273 0.29412718794350207 1.0 ['ENSG00000112212|ENST00000373161|TSPO2'] 68726 16310 LTKRYDAL True PC9_epitope_Rep1 978.5498304850598 978.54872993586 67.556 2 -0.9581801594749383 0.29412877763961726 1.0 ['ENSG00000165156|ENST00000395571|ZHX1'] 39312 2671 HIRRYTQMW True NCI_RA007_Epitope_Rep5 1289.64514493557 1289.64349490379 14.968 3 -0.9581919188938601 0.29412877763961726 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 41826 8271 IAVFYTFVSP True PC9_epitope_Rep5 1142.60119735158 1142.59954490379 36.756 3 -0.9582123891497442 0.29412877763961726 1.0 ['ENSG00000255223|ENST00000528616|OR5M11'] 139697 6880 YNKFKNNCFC True NCI_RA007_Epitope_Rep4 1279.54779896307 1279.54615490379 33.081 3 -0.9583152242153197 0.29415183338063766 1.0 ['SLC6A14|p.S345C|1|0.2|ENSG00000268104|chrX:116451545-116451545|C/G|missense_variant'] 61338 12611 LISDSNPL True PC9_epitope_Rep1 857.44944773745 857.44834993586 53.376 2 -0.9583518307643641 0.2941613731585349 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 50113 14818 KKKKEEKSKDK True NCI_RA007_Epitope_Rep2 1374.81946338574 1374.8178149037901 62.313 3 -0.9584752620932964 0.2941939669153422 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 18674 4808 ELAELDQWPQ True NCI_RA007_Epitope_Rep2 1227.57716743171 1227.5755349037902 23.329 3 -0.9584784329667981 0.2941939669153422 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 11445 7934 DEYKEIFYRRN True PC9_epitope_Rep5 1531.7419413410298 1531.74028490379 35.459 3 -0.9586061054948567 0.2942496114602338 1.0 ['ENSG00000115339|ENST00000392701|GALNT3'] 3318 8175 AGGGQKSVL True PC9_epitope_Rep1 815.4501164437899 815.44900993586 36.277 2 -0.9586380266190802 0.2942496114602338 1.0 ['ENST00000292199.6_1_11:119039446-119042159:+|nuORF'] 25060 23208 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 95.473 2 -0.9586415580865161 0.2942496114602338 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 125411 13627 VISSAELRLF True PC9_epitope_Rep1 1133.64445914589 1133.64280490379 57.273 3 -0.9586746438329043 0.29425914914319695 1.0 ['ENSG00000125378|ENST00000245451|BMP4'] 52379 24639 KKLKRGRPGRK True H1975_Epitope_Rep1 1322.8735050776197 1322.87240993586 102.09 2 -0.9587596559709647 0.29428220062975524 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant', 'ENST00000572579.1_1_17:7796637-7797935:+|nuORF'] 61720 15195 LLADARTVL True PC9_epitope_Rep2 970.5811306133401 970.58002993586 63.707 2 -0.9588859594719532 0.2943322792507906 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF'] 75351 10800 NISCKASQDI True PC9_epitope_Rep4 1077.5124590001699 1077.51136993586 49.301 2 -0.9590004041118528 0.2944499249989865 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 37449 17979 GVTLSVIVSP True PC9_epitope_Rep3 970.5698972233 970.56880993586 74.36 2 -0.9590655063064997 0.2944864864864865 1.0 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A'] 56656 16309 LDITTVTGVP True PC9_epitope_Rep5 1014.5597264624199 1014.55862993586 67.728 2 -0.9591064629316152 0.2945095336549506 1.0 ['NDUFS4|p.L64V|1|0.48|ENSG00000164258|chr5:53646245-53646245|T/G|missense_variant'] 132168 8752 VTVPPDVFFF True NCI_RA007_Epitope_Rep3 1166.60119735158 1166.60010993586 41.515 2 -0.9591595878504884 0.29453258020053513 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 21096 12497 EQYQVLIHAK True NCI_RA007_Epitope_Rep1 1227.6611718391898 1227.66006993586 52.59 2 -0.9592030472798287 0.29454211315757467 1.0 ['CDH12|p.Q238H|1|0.17|ENSG00000154162|chr5:21842261-21842261|T/A|missense_variant'] 44675 12794 ILSYMYIIR True H1975_Epitope_Rep3 1170.64710199818 1170.64600993586 54.429 2 -0.9592282033196511 0.2945651586400735 1.0 ['ENSG00000205329|ENST00000641740|OR6C3'] 66718 12222 LSLGLGSPL True PC9_epitope_Rep2 855.50656869075 855.50546993586 52.325 2 -0.9592888687813346 0.29461124773667 1.0 ['ENST00000375279.6_1_20:32236165-32236447:+|nuORF'] 12557 8387 DKQLLYSEAK True H1975_Epitope_Rep1 1193.62920300457 1193.62810993586 37.188 2 -0.9592915996350236 0.29461124773667 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3', 'ENST00000548709.1_1_12:56490921-56492754:+|nuORF'] 36380 15390 GVFGGPYP True PC9_epitope_Rep3 792.3806399016398 792.37954993586 64.353 2 -0.959325109584664 0.29462077911548906 1.0 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 30916 7101 GAQPLAAAQG True PC9_epitope_Rep4 882.4559301002198 882.45482993586 34.58 2 -0.959383711767507 0.29465335297058465 1.0 ['ENST00000407149.6_1_5:119799996-119800155:+|nuORF'] 633 9645 AASQWISRAP True PC9_epitope_Rep2 1085.56179215109 1085.5606899358602 42.44 2 -0.9594100047642741 0.29465335297058465 1.0 ['ENST00000508056.5_2_5:175600468-175603287:-|nuORF'] 56521 21997 LDFSCNKITT True NCI_RA007_Epitope_Rep5 1140.54851015572 1140.54685490379 91.744 3 -0.9594741708747705 0.2947129480752861 1.0 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 55745 18476 LALRLAGL True PC9_epitope_Rep2 825.5436229058099 825.54252993586 76.403 2 -0.9594889673245083 0.2947129480752861 1.0 ['ENSG00000266714|ENST00000645453|MYO15B', 'nc|ENSG00000266714|Q96JP2-2|MYO15B'] 22964 13711 EVERDFASVYS True H1975_Epitope_Rep2 1300.59354577184 1300.59244993586 57.882 2 -0.9595893491518247 0.29476855729997026 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000470518.5_1_22:40803281-40805023:+|nuORF', 'ENST00000478085.5_1_22:40803992-40804918:+|nuORF'] 38223 14441 HEAQPRPP True H1975_Epitope_Rep2 930.4671634902598 930.46606993586 60.702 2 -0.9595934374403832 0.29476855729997026 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF'] 22817 4735 EVAAVAVLMC True PC9_epitope_Rep6 1004.5034745395999 1004.50236993586 25.628 2 -0.9596249413277519 0.29476855729997026 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 33034 19709 GIIPGLVVE True PC9_epitope_Rep6 895.53786881903 895.5373249679301 88.467 1 -0.9597089002388208 0.2947780855232048 1.0 ['ENST00000368072.9_1_1:160247107-160247371:-|nuORF'] 92400 9522 RLPTPEQI True PC9_epitope_Rep4 952.5341804209199 952.53308993586 44.236 2 -0.9597267174877354 0.29478761348897536 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 116703 17092 TVDDRVSLL True PC9_epitope_Rep1 1016.5502244078799 1016.54912993586 70.571 2 -0.9597503075959988 0.2947971411972925 1.0 ['ENST00000472024.2_1_3:87276594-87289522:+|nuORF'] 25063 23633 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 97.495 2 -0.9598852574828426 0.29486781135592993 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 133209 12473 VVSEYRASL True PC9_epitope_Rep2 1022.5396597241798 1022.53856993586 53.287 2 -0.9598981686870066 0.29486781135592993 1.0 ['nc|ENSG00000155256|Q5T4F4-4|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-8|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-2|ZFYVE27', 'ENSG00000155256|ENST00000684270|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-3|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-6|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-7|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-5|ZFYVE27'] 30327 6931 GAALKEIV True NCI_RA007_Epitope_Rep3 799.4803539429099 799.47924993586 34.37 2 -0.9599519371073566 0.29486781135592993 1.0 ['ENSG00000100445|ENST00000399395|SDR39U1', 'nc|ENSG00000100445|Q9NRG7-3|SDR39U1'] 70398 10352 LVTGIQLNP True H1975_Epitope_Rep3 953.55458151233 953.55348993586 44.873 2 -0.9599964679305217 0.29486781135592993 1.0 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'WDR75|p.I624Yfs*18|1|0.22|ENSG00000115368|chr2:189470121-189470122|-/G|frameshift_variant', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 102425 10480 SLTPASPTEVP True PC9_epitope_Rep2 1097.56045473841 1097.5593499358602 45.629 2 -0.9599965137625661 0.29486781135592993 1.0 ['ENSG00000263956|ENST00000682118|NBPF11'] 73628 8169 MWNWMVSL True PC9_epitope_Rep4 1065.47759414493 1065.4764899358602 38.877 2 -0.9600073414930503 0.29486781135592993 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 3760 16548 AGSVLFMKTGL True PC9_epitope_Rep4 1122.61071648946 1122.6096099358601 71.626 2 -0.9600489316752356 0.29487733707986596 1.0 ['ENST00000509141.5_1_16:29362989-29370611:+|nuORF'] 139642 19881 YMIKYWIEVK True H1975_Epitope_Rep1 1371.7260805948702 1371.72498993586 82.746 2 -0.9601037173973841 0.2949003714961162 1.0 ['ENST00000470305.1_1_9:91939336-91939396:+|nuORF'] 84025 12841 PVTTEITSLD True PC9_epitope_Rep5 1074.5444703211 1074.54387496793 54.403 1 -0.9601832075414227 0.29490989652284333 1.0 ['ENSG00000023318|ENST00000262455|ERP44'] 57057 18374 LDSEAWPGV True PC9_epitope_Rep4 972.4552613938798 972.45416993586 78.741 2 -0.9601981921942705 0.2949194212922312 1.0 ['nc|ENSG00000113645|Q8IX03-2|WWC1', 'ENSG00000113645|ENST00000265293|WWC1', 'WWC1|p.E587Kfs*19|1|0.13|ENSG00000113645|chr5:168424016-168424016|G/-|frameshift_variant'] 20034 10942 ELYYTLHAP True PC9_epitope_Rep4 1105.54441075145 1105.5433099358602 49.857 2 -0.9602162690543019 0.29492894580429024 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 135820 13102 WNNLRVTRI True PC9_epitope_Rep4 1170.6621748987 1170.66106993586 58.29 2 -0.960313519485125 0.29493448601918143 1.0 ['ENST00000572844.1_1_17:7399627-7399921:+|nuORF'] 61445 24447 LIWRLFFLIM True NCI_RA007_Epitope_Rep2 1350.7886212817798 1350.7875299358602 102.7 2 -0.9603446206654039 0.29493448601918143 1.0 ['ENST00000487752.1_1_12:9821312-9833634:+|nuORF', 'nc|ENSG00000069493|Q9UHP7-5|CLEC2D', 'nc|ENSG00000069493|Q9UHP7-2|CLEC2D', 'ENSG00000069493|ENST00000290855|CLEC2D', 'nc|ENSG00000069493|Q9UHP7-3|CLEC2D'] 4916 8277 ALFVCLAL True PC9_epitope_Rep5 848.4829967951998 848.48188993586 36.776 2 -0.9604301358682721 0.2949845335062339 1.0 ['ABCA7|p.G1251C|1|0.12|ENSG00000064687|chr19:1054594-1054594|G/T|missense_variant'] 81038 15704 PINRKRGNP True PC9_epitope_Rep2 1050.60466002258 1050.6035699358602 65.68 2 -0.960462121263908 0.29502107196887833 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|99|2|sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|35|1|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|156|3|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|136|3|sense'] 73990 7763 NDEDEPQK True H1975_Epitope_Rep3 973.3988687165701 973.39776993586 34.845 2 -0.9605126792047972 0.2950401167031364 1.0 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 11029 11662 DASEINSEQD True H1975_Epitope_Rep3 1106.4363764241 1106.43526993586 49.993 2 -0.9605161503324403 0.2950401167031364 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 75925 15590 NLSDALDKIL True PC9_epitope_Rep5 1100.607739284 1100.60664993586 64.976 2 -0.9606742163789163 0.29506314580941445 1.0 ['ENST00000506915.1_1_4:190394211-190394298:+|nuORF'] 99423 10718 SHYSKNLTEKP True H1975_Epitope_Rep3 1302.6568147347398 1302.6557099358602 46.303 2 -0.9607107912428345 0.29507266735101845 1.0 ['ENSG00000138604|ENST00000261858|GLCE'] 22115 9762 ESQQEGAVAP True H1975_Epitope_Rep1 1014.4618033262997 1014.46070993586 42.479 2 -0.9607628234314509 0.2950917096626057 1.0 ['ENSG00000161328|ENST00000270115|LRRC56'] 123121 18627 VGKLWFVL True PC9_epitope_Rep2 960.5796740613598 960.57856993586 77.012 2 -0.9608107998200279 0.2950917096626057 1.0 ['ENSG00000177291|ENST00000321660|GJD4'] 74225 8223 NEHMTNSTMSP True H1975_Epitope_Rep3 1247.49107193259 1247.48996993586 36.612 2 -0.9608938886748017 0.2950932591402061 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 100186 3930 SIVDAINQAA True H1975_Epitope_Rep3 1000.5189242796 1000.51782993586 20.244 2 -0.9609161495353631 0.2950932591402061 1.0 ['ENSG00000165283|ENST00000356493|STOML2'] 79851 6693 PEISHVNFRMF True NCI_RA007_Epitope_Rep1 1375.6706909770699 1375.6695899358601 30.044 2 -0.9609500718192419 0.2950932591402061 1.0 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'ZSCAN5A|p.G320Afs*11|1|0.15|ENSG00000131848|chr19:56222107-56222107|C/-|frameshift_variant', 'ENST00000592101.1_1_19:56735938-56736358:-|nuORF'] 94552 19154 RRRVYRRRR True NCI_RA007_Epitope_Rep3 1372.8500842944397 1372.8489899358601 83.645 2 -0.9609705090646778 0.29510277950352504 1.0 ['ENST00000469908.5_2_16:2390982-2391318:+|nuORF'] 130854 11429 VTCDDYYYGF True PC9_epitope_Rep3 1244.4695911286801 1244.4679349037901 48.961 3 -0.9610385103695155 0.2951393109409397 1.0 ['JAG1|p.P248Sfs*165|1|0.24|ENSG00000101384|chr20:10656411-10656412|-/GA|frameshift_variant', 'nc|ENSG00000101384|P78504-2|JAG1', 'JAG1|p.A1131Pfs*19|1|0.19|ENSG00000101384|chr20:10639764-10639764|C/-|frameshift_variant', 'JAG1|p.N1187Tfs*25|1|0.07|ENSG00000101384|chr20:10639597-10639597|G/-|frameshift_variant', 'ENSG00000101384|ENST00000254958|JAG1'] 67793 11195 LSYYRYQLNLF True H1975_Epitope_Rep1 1478.7558005000199 1478.75470993586 48.03 2 -0.961058881352422 0.2951448443514079 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant'] 44555 21611 ILNRFRNYFRH True NCI_RA007_Epitope_Rep1 1534.82694880802 1534.82584993586 88.441 2 -0.9610654114679161 0.2951448443514079 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 84780 8378 QDVIPDSQAA True NCI_RA007_Epitope_Rep2 1042.49310345458 1042.49200993586 37.229 2 -0.961096420905547 0.2951503774629627 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 129429 16483 VRGGVGGGLIG True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 70.161 2 -0.9610970142499148 0.2951503774629627 1.0 ['ENST00000566392.5_1_16:67336668-67360655:-|nuORF'] 14451 4559 DTEKSRFFRFC True NCI_RA007_Epitope_Rep2 1434.6714192530599 1434.67032993586 22.363 2 -0.9611314019881209 0.2951734010371651 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 129428 15975 VRGGVGGGLIG True NCI_RA007_Epitope_Rep3 940.5454138109598 940.54430993586 70.509 2 -0.9611838602461676 0.2952369377034126 1.0 ['ENST00000566392.5_1_16:67336668-67360655:-|nuORF'] 81541 13790 PLIRQIQT True PC9_epitope_Rep1 967.58146496651 967.58036993586 57.888 2 -0.9612740551511555 0.2952440111270154 1.0 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 120494 7603 VEEYVYEFRDK True NCI_RA007_Epitope_Rep2 1475.6932598131095 1475.6921699358602 34.197 2 -0.9612800734470471 0.2952440111270154 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 25066 24111 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 99.872 2 -0.9613473116198696 0.2952440111270154 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 87053 16606 QNFSVSLNI True PC9_epitope_Rep5 1020.52400966004 1020.52290993586 68.881 2 -0.9613482603077228 0.2952440111270154 1.0 ['ENST00000486271.5_1_3:112732082-112732223:-|nuORF'] 74145 10837 [Acetylation]-NEDKVGVAVGE True H1975_Epitope_Rep1 1157.5564323034298 1157.55532993586 46.646 2 -0.961394529109715 0.2952440111270154 1.0 ['ENST00000503555.5_1_4:41145057-41179590:-|nuORF'] 82058 7025 PLYSQKRYEEI True NCI_RA007_Epitope_Rep1 1424.729979675 1424.72833490379 31.323 3 -0.9614766039386943 0.29524954088797667 1.0 ['ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 25168 59 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 0.34423 2 -0.9615553045319976 0.29524954088797667 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 37133 12773 GVQAGRGA True NCI_RA007_Epitope_Rep5 714.3772858566998 714.37673496793 55.81 1 -0.9616130825698496 0.2952915918389392 1.0 ['ENST00000464994.5_1_2:102608489-102626165:+|nuORF', 'ENST00000332549.7_1_2:102608419-102626165:+|nuORF'] 67594 9024 LSVEEFMSLP True PC9_epitope_Rep6 1150.55801221026 1150.5569099358602 44.749 2 -0.961620706508817 0.2952915918389392 1.0 ['ENSG00000221823|ENST00000234310|PPP3R1', 'ENSG00000188386|ENST00000374806|PPP3R2'] 41725 6373 IALIGSGW True PC9_epitope_Rep4 815.45413919507 815.45304993586 31.598 2 -0.9616361022477595 0.2952915918389392 1.0 ['ENSG00000125734|ENST00000264080|GPR108'] 7369 20254 ARRYPIRGF True NCI_RA007_Epitope_Rep3 1134.6410455312996 1134.63940490379 88.242 3 -0.961660374551928 0.29531062232484034 1.0 ['ENSG00000277535|ENST00000620151|CT47C1'] 19146 22309 ELGYLCLKWLP True PC9_epitope_Rep5 1333.7104305307298 1333.70932993586 90.818 2 -0.9616652744961591 0.29531062232484034 1.0 ['ENST00000297578.8_1_8:104412404-104412587:-|nuORF'] 41602 9618 IADIVYQMSPW True NCI_RA007_Epitope_Rep1 1321.63765951329 1321.63656993586 41.411 2 -0.9617039635731263 0.29534070503733106 1.0 ['NALCN|p.D134Y|1|0.23|ENSG00000102452|chr13:101377032-101377032|C/A|missense_variant'] 131620 23381 VTLRQLRN True PC9_epitope_Rep2 998.59851201298 998.59740993586 95.41 2 -0.961708533884535 0.29534070503733106 1.0 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 47106 10524 ITTRPNRIYMT True H1975_Epitope_Rep3 1364.7234548259198 1364.7223499358602 45.546 2 -0.9617199155290208 0.29534070503733106 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 83618 20037 PVDLGAPI True H1975_Epitope_Rep2 780.43815477776 780.43760496793 83.053 1 -0.9617393090999697 0.29534070503733106 1.0 ['ENSG00000071894|ENST00000616140|CPSF1'] 40982 9180 HTDTSLIPPIQ True H1975_Epitope_Rep2 1220.64010204144 1220.63900993586 40.265 2 -0.9617520135949216 0.29534070503733106 1.0 ['WNT2B|p.M338Efs*92|1|0.45|ENSG00000134245|chr1:112520344-112520356|CATGTGCTGTGGC/-|frameshift_variant'] 42225 11006 IDSIRGYFGET True H1975_Epitope_Rep1 1256.6037165327198 1256.60260993586 47.295 2 -0.9617646946185177 0.29534070503733106 1.0 ['nc|ENSG00000160746|Q9NW15-4|ANO10', 'nc|ENSG00000160746|Q9NW15-3|ANO10', 'nc|ENSG00000160746|Q9NW15-5|ANO10', 'ENSG00000160746|ENST00000292246|ANO10'] 117236 19068 TVLQRLDV True PC9_epitope_Rep3 942.5498304850599 942.54872993586 78.568 2 -0.961819200999994 0.29536371982502563 1.0 ['nc|ENSG00000164253|Q9HAD4-2|WDR41', 'ENSG00000164253|ENST00000296679|WDR41', 'ENST00000507452.5_1_5:76747118-76788033:-|nuORF'] 20778 15553 EQHGEFQYF True H1975_Epitope_Rep2 1183.4934378077498 1183.49179490379 64.98 3 -0.9618915868374768 0.2953652576581928 1.0 ['ENST00000487009.5_1_1:222753140-222761905:-|nuORF'] 113942 13218 TPAAHSTF True PC9_epitope_Rep1 830.3922672145001 830.39116993586 55.706 2 -0.9619058966068422 0.2953652576581928 1.0 ['ENST00000262971.2_1_19:4037866-4037950:+|nuORF'] 127469 9080 VNLEKSLL True NCI_RA007_Epitope_Rep4 914.54368247546 914.54258993586 41.76 2 -0.9619091771498359 0.2953652576581928 1.0 ['ENSG00000165733|ENST00000374518|BMS1'] 138916 2770 YKKEEEEEESE True NCI_RA007_Epitope_Rep1 1427.59399926431 1427.59234490379 14.655 3 -0.9619682787914197 0.2953882708715844 1.0 ['ENST00000553920.5_1_14:23377568-23380602:-|nuORF'] 9129 4990 AVIWCTWFL True NCI_RA007_Epitope_Rep5 1137.56812340149 1137.56647490379 25.899 3 -0.9620053522947474 0.2953977832678574 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 119413 16094 VAQLDQLLH True PC9_epitope_Rep4 1035.57129420563 1035.57018993586 69.842 2 -0.9620535734418545 0.2954477954477954 1.0 ['ENSG00000089199|ENST00000378961|CHGB', 'CHGB|p.Y613C|1|0.16|ENSG00000089199|chr20:5923982-5923982|A/G|missense_variant'] 136096 25281 WRLLIFLGLL True PC9_epitope_Rep3 1242.7852501534999 1242.78361490379 102.65 3 -0.9621992534226913 0.29552480593992575 1.0 ['nc|ENSG00000131059|Q9BQP9-2|BPIFA3', 'ENSG00000131059|ENST00000375454|BPIFA3'] 53755 16247 KSRTRWIHSQI True PC9_epitope_Rep3 1410.7844152896998 1410.7833099358602 67.632 2 -0.9622532674729892 0.2955303265521012 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|56|2|sense'] 123667 5878 VGQRLPAP True PC9_epitope_Rep2 836.4868363056798 836.48572993586 28.004 2 -0.9622823359849358 0.2955303265521012 1.0 ['ENST00000240285.9_1_8:74206860-74207115:+|nuORF'] 29485 9930 FVFEYMHTDL True PC9_epitope_Rep3 1300.579810284 1300.5787099358602 43.153 2 -0.9623382076919011 0.29553185745140387 1.0 ['ENST00000451080.5_1_2:202672326-202741280:+|nuORF', 'nc|ENSG00000138395|Q96Q40-4|CDK15', 'nc|ENSG00000138395|Q96Q40-3|CDK15', 'nc|ENSG00000138395|Q96Q40-5|CDK15', 'ENSG00000138395|ENST00000652192|CDK15'] 66139 21170 LSEMRHYQRLP True PC9_epitope_Rep3 1428.72960283552 1428.72850993586 86.718 2 -0.9623664080213757 0.29553185745140387 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-4|GREB1L', 'ENST00000578368.5_1_18:18963479-19048745:+|nuORF', 'ENST00000584446.5_1_18:18963479-19034595:+|nuORF'] 123906 5472 VGRRSPGN True PC9_epitope_Rep5 841.4518477792899 841.45074993586 26.059 2 -0.9623712599159886 0.29553185745140387 1.0 ['ENSG00000178605|ENST00000326153|GTPBP6'] 37534 16868 GVVFWYKRRV True NCI_RA007_Epitope_Rep3 1308.7455105998397 1308.7444099358602 74.224 2 -0.9623975060683968 0.2955333882267187 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 37200 16312 GVQYNINPYL True PC9_epitope_Rep5 1179.59242357303 1179.5913299358601 67.74 2 -0.9624058230575779 0.2955333882267187 1.0 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 61315 13507 LIRCPCVSAVC True PC9_epitope_Rep5 1162.5660918795 1162.5644549037902 56.974 3 -0.9624109560256178 0.2955333882267187 1.0 ['ENST00000468392.5_1_21:45165928-45175941:+|nuORF'] 18395 10999 EITYAEVRFK True H1975_Epitope_Rep1 1254.66083748602 1254.6597499358602 47.271 2 -0.9624485394055398 0.295569893634253 1.0 ['nc|ENSG00000111729|Q9UMR7-4|CLEC4A', 'nc|ENSG00000111729|Q9UMR7-3|CLEC4A', 'nc|ENSG00000111729|Q9UMR7-2|CLEC4A', 'ENSG00000111729|ENST00000229332|CLEC4A'] 128209 21517 VPNIDFEGLF True PC9_epitope_Rep5 1149.57062549929 1149.5695299358601 87.801 2 -0.9626087364069433 0.2956468920834177 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 59003 17821 LEVLEAGI True PC9_epitope_Rep2 842.4749342092999 842.47382993586 73.842 2 -0.962757583779099 0.2956968928002592 1.0 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L', 'ENST00000565281.5_1_15:66585934-66615040:+|nuORF', 'ENST00000524795.5_1_15:66587446-66615029:+|nuORF'] 56551 11646 LDGNSHFRHL True PC9_epitope_Rep3 1194.58940388126 1194.58774490379 49.811 3 -0.9628196981718049 0.29574290033473705 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644', 'ZNF644|p.I882Mfs*40|1|0.08|ENSG00000122482|chr1:90938654-90938708|CTGACCTTCCACTTTGCTCTTAAATAAAGGGAATAAATTTACATGCTCTTGATTA/-|frameshift_variant'] 122114 14942 VGAEHTLAL True PC9_epitope_Rep4 909.4919812557699 909.49088993586 65.415 2 -0.9628427405134586 0.29574290033473705 1.0 ['ENSG00000103657|ENST00000443617|HERC1'] 5826 7571 APEYYEPSL True PC9_epitope_Rep4 1067.4811417885498 1067.48004993586 36.5 2 -0.9628811673061174 0.29574442239948173 1.0 ['ENST00000467457.5_1_3:49053892-49055376:-|nuORF'] 25794 10268 FEVYVDTDAK True PC9_epitope_Rep2 1185.5553693579698 1185.55426993586 44.829 2 -0.9629085547495145 0.29574442239948173 1.0 ['nc|ENSG00000168778|Q96GX1-2|TCTN2', 'ENSG00000168778|ENST00000303372|TCTN2'] 129431 24778 VRGHLKKKR True PC9_epitope_Rep3 1120.73052924204 1120.72942993586 100.69 2 -0.9629086241435935 0.29574442239948173 1.0 ['ENSG00000196562|ENST00000688720|SULF2', 'nc|ENSG00000196562|Q8IWU5-2|SULF2'] 67834 11311 LTAIPFWYHM True PC9_epitope_Rep3 1277.62670090677 1277.6256099358602 48.515 2 -0.9629286901092569 0.29574993589137977 1.0 ['nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 100787 15595 SLEEYEPRGP True H1975_Epitope_Rep2 1175.54586730343 1175.5447699358601 65.142 2 -0.9629418614646703 0.29574993589137977 1.0 ['ENSG00000198265|ENST00000358691|HELZ'] 23253 5135 EVPASFHSER True NCI_RA007_Epitope_Rep1 1157.5465360097699 1157.54488490379 24.057 3 -0.9629529704351958 0.2957554490856333 1.0 ['nc|ENSG00000134489|Q9H3N8-2|HRH4', 'ENSG00000134489|ENST00000256906|HRH4'] 58843 5024 LESTELNTPVG True NCI_RA007_Epitope_Rep5 1158.57683307854 1158.5757299358602 26.029 2 -0.9629629103802216 0.2957554490856333 1.0 ['ENST00000375377.1_1_10:30317616-30317655:-|nuORF'] 52360 9573 KKKMNEKRKR True NCI_RA007_Epitope_Rep4 1344.8136072429995 1344.8125099358601 43.668 2 -0.9629988651347541 0.29576495357374216 1.0 ['nc|ENSG00000111364|Q8NHQ9-2|DDX55', 'ENSG00000111364|ENST00000238146|DDX55'] 138737 14592 YIRGYGGEEK True PC9_epitope_Rep6 1170.5669371011797 1170.5658499358601 68.026 2 -0.9630302300851578 0.29577445780530925 1.0 ['nc|ENSG00000110786|P54829-2|PTPN5', 'nc|ENSG00000110786|P54829-3|PTPN5', 'ENSG00000110786|ENST00000358540|PTPN5'] 55113 14721 LAAASDVLGL True PC9_epitope_Rep5 928.5229470308799 928.52184993586 61.623 2 -0.9630596455550415 0.29578396178034494 1.0 ['ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 23013 7915 EVFPKEMTKWN True PC9_epitope_Rep5 1407.6856723348697 1407.68401490379 35.386 3 -0.9630635134170883 0.29579346549885965 1.0 ['nc|ENSG00000110697|O00562-2|PITPNM1', 'ENSG00000110697|ENST00000356404|PITPNM1', 'ENST00000525521.1_1_11:67267179-67267460:-|nuORF'] 81690 13836 PLLVQMDCNY True PC9_epitope_Rep3 1194.5413166003 1194.5396849037902 58.3 3 -0.9631186108434848 0.2958029689608637 1.0 ['nc|ENSG00000196115|Q6NVV9-6|ADAM5', 'nc|ENSG00000196115|Q6NVV9-7|ADAM5', 'nc|ENSG00000196115|Q6NVV9|ADAM5'] 116363 12029 TTFIDMQWRYK True H1975_Epitope_Rep1 1487.7231204727498 1487.72202993586 51.279 2 -0.9632564170469612 0.2958124721663675 1.0 ['ENSG00000177807|ENST00000644903|KCNJ10'] 119391 10809 VAPQIPPH True NCI_RA007_Epitope_Rep2 857.47593726881 857.47484993586 46.647 2 -0.9633545819386826 0.29586245985263554 1.0 ['ENST00000535977.5_1_16:678253-678325:+|nuORF'] 63795 9198 LNGGANIEA True PC9_epitope_Rep4 857.42429561877 857.42374496793 42.977 1 -0.9633898515242026 0.2958854567291473 1.0 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 15700 13719 EAVSAHLEI True PC9_epitope_Rep5 967.49746055903 967.49636993586 57.797 2 -0.9634634391019957 0.29591396108277335 1.0 ['ENST00000565125.5_1_11:68658919-68659369:-|nuORF'] 85680 5260 QGSLASLEAEQ True NCI_RA007_Epitope_Rep5 1131.54078192299 1131.53968993586 26.928 2 -0.9634980297469393 0.29591396108277335 1.0 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 46160 9056 ISLIWKYYSVP True H1975_Epitope_Rep1 1367.74892421443 1367.7478299358602 39.743 2 -0.9635159484033166 0.29591396108277335 1.0 ['nc|ENSG00000182093|O00258-2|GET1', 'ENST00000490860.1_1_21:40764845-40768862:+|nuORF', 'ENSG00000182093|ENST00000649170|GET1'] 110646 16937 TFWAEVFFVRK True PC9_epitope_Rep1 1428.7554065772 1428.75376490379 69.971 3 -0.9635389503719974 0.2959224977737 1.0 ['ENST00000439374.6_1_1:151024696-151024969:-|nuORF'] 80550 7550 PGPLSKQGS True PC9_epitope_Rep4 869.46068112749 869.46013496793 36.413 1 -0.96355542553096 0.2959224977737 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 125404 7197 VISNKCDG True NCI_RA007_Epitope_Rep2 834.3905529623399 834.39000496793 32.616 1 -0.9635690809598826 0.2959224977737 1.0 ['nc|ENSG00000108389|Q9NYA4|MTMR4', 'ENSG00000108389|ENST00000682306|MTMR4'] 72464 10019 MKVRIFLKK True NCI_RA007_Epitope_Rep5 1161.74200544253 1161.7403549037901 45.179 3 -0.9635747516979747 0.2959224977737 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 9300 18418 AVQLCQSALRI True PC9_epitope_Rep1 1200.66487732064 1200.66322490379 75.635 3 -0.9636053960709651 0.2959224977737 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1'] 110547 5953 TFPQYEERWQW True H1975_Epitope_Rep3 1568.7048275563197 1568.70319490379 27.909 3 -0.9636063109397176 0.2959224977737 1.0 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant'] 80086 23135 PFLLPKSQT True H1975_Epitope_Rep1 1029.5858816406098 1029.58478993586 96.19 2 -0.9636197552258141 0.2959224977737 1.0 ['nc|ENSG00000075651|Q13393-4|PLD1', 'nc|ENSG00000075651|Q13393-2|PLD1', 'ENSG00000075651|ENST00000351298|PLD1', 'ENST00000471075.1_1_3:171371881-171395443:-|nuORF'] 5434 5795 ALTVKEGDH True NCI_RA007_Epitope_Rep4 968.4927095317598 968.49160993586 28.914 2 -0.9636249030699293 0.2959224977737 1.0 ['ENSG00000106086|ENST00000449726|PLEKHA8', 'nc|ENSG00000293316|O95397|PLEKHA8P1', 'ENST00000256692.5_1_12:45566975-45568244:-|nuORF'] 112780 16885 TLHWSFLL True PC9_epitope_Rep2 1015.5491022090699 1015.54800993586 70.195 2 -0.9636774469439953 0.2959454901167105 1.0 ['ENST00000579809.1_1_17:77080425-77082428:+|nuORF', 'ENST00000300682.14_2_17:77078803-77082428:+|nuORF', 'ENSG00000167280|ENST00000579016|ENGASE'] 53444 21050 KREVVIDWILL True PC9_epitope_Rep3 1382.8285715174597 1382.82691490379 86.248 3 -0.9636815703053296 0.2959549894759566 1.0 ['ENST00000524591.6_1_8:12879494-12879584:+|nuORF'] 94404 20119 RRRRLWLKE True H1975_Epitope_Rep3 1311.8000057841898 1311.79837490379 84.179 3 -0.9637417927281153 0.2959779807601495 1.0 ['ENST00000606621.1_1_6:85472779-85472989:-|nuORF'] 113694 6176 TLYFERRTEFF True H1975_Epitope_Rep1 1507.7459640923096 1507.7443049037902 28.825 3 -0.9637839314279278 0.29600248242738225 1.0 ['ENSG00000128655|ENST00000286063|PDE11A', 'nc|ENSG00000128655|Q9HCR9-4|PDE11A', 'nc|ENSG00000128655|Q9HCR9-3|PDE11A', 'nc|ENSG00000128655|Q9HCR9-2|PDE11A'] 2961 9566 AFFFFLHP True NCI_RA007_Epitope_Rep5 1024.5170738047998 1024.51596993586 43.437 2 -0.9638300293456615 0.29600248242738225 1.0 ['ENST00000174618.4_1_17:2304187-2304379:-|nuORF'] 50065 17313 KKGAGGGG True H1975_Epitope_Rep3 630.34492309926 630.3443749679301 72.247 1 -0.9638474166071732 0.29600248242738225 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 119252 16475 VALKAADI True PC9_epitope_Rep5 799.4803539429099 799.47924993586 68.369 2 -0.9638636790885401 0.29600248242738225 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ENST00000510774.1_1_3:130699433-130714956:+|nuORF'] 73517 4363 MVKKLPPVLL True PC9_epitope_Rep3 1136.7355230797598 1136.7344299358601 21.887 2 -0.9638728496027087 0.29601349072512645 1.0 ['nc|ENSG00000125775|Q9H190-3|SDCBP2', 'ENSG00000125775|ENST00000360779|SDCBP2'] 39314 11771 HISLFYSPAL True PC9_epitope_Rep4 1146.60734536118 1146.60568490379 53.044 3 -0.9638791694010479 0.29601349072512645 1.0 ['ENST00000473581.5_1_X:48834665-48847670:-|nuORF'] 16408 11864 EEKENYRYTVR True NCI_RA007_Epitope_Rep2 1485.7212058964499 1485.7201099358601 50.751 2 -0.9638794331845794 0.29601349072512645 1.0 ['PCDH20|p.K604N|1|0.52|ENSG00000280165|chr13:61412287-61412287|C/G|missense_variant'] 124005 11356 VGSFDIAG True PC9_epitope_Rep3 764.37046914076 764.36936993586 48.684 2 -0.9638960051432415 0.29601349072512645 1.0 ['ENSG00000104969|ENST00000221566|SGTA'] 125499 17495 VIYYSFNIVCL True PC9_epitope_Rep1 1332.67879604928 1332.6771449037901 72.09 3 -0.9639577092079413 0.29601500107921436 1.0 ['ENSG00000183034|ENST00000331427|OTOP2'] 62279 22883 LLFQQIKKDLK True PC9_epitope_Rep4 1372.8442215815996 1372.84258490379 96.238 3 -0.9639889950062258 0.29601500107921436 1.0 ['ENST00000465670.1_1_7:2418302-2418434:+|nuORF'] 64372 21609 LPLLRVPLL True PC9_epitope_Rep4 1032.70593720364 1032.70484993586 91.309 2 -0.9639954745239427 0.29601500107921436 1.0 ['ENST00000296597.9_1_5:60240975-60241137:+|nuORF'] 134937 10908 WACGLQPR True H1975_Epitope_Rep3 929.45415627841 929.45304993586 47.045 2 -0.9641030196363669 0.2960449995953274 1.0 ['ENST00000375859.3_1_9:91003368-91041307:+|nuORF'] 101229 10495 SLHLFGRK True H1975_Epitope_Rep3 956.5555845718399 956.55448993586 45.432 2 -0.9641333706665082 0.2960449995953274 1.0 ['ENST00000369258.8_1_1:146724383-146726565:+|nuORF'] 140563 17243 YRPPEVIL True PC9_epitope_Rep5 985.5596668927699 985.55856993586 71.342 2 -0.9641407535097936 0.2960449995953274 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 102048 4426 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 21.909 3 -0.9641564634101002 0.2960449995953274 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 124129 7954 VGSQSFSP True H1975_Epitope_Rep2 807.37628279719 807.37518993586 35.543 2 -0.9641807630802838 0.2960449995953274 1.0 ['nc|ENSG00000111913|Q9Y4F9|RIPOR2', 'ENSG00000111913|ENST00000643898|RIPOR2', 'nc|ENSG00000111913|Q9Y4F9-2|RIPOR2'] 72425 25335 MKMKILKSRL True PC9_epitope_Rep2 1246.7617549109398 1246.76064993586 103.13 2 -0.9642013403095827 0.2960449995953274 1.0 ['ENST00000484167.5_1_2:242282419-242283206:+|nuORF'] 84982 5672 QEETKTVL True PC9_epitope_Rep6 946.4971262058599 946.49602993586 29.928 2 -0.9642709756434104 0.2960639905039387 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 130279 5246 VSGQPQSVTA True PC9_epitope_Rep1 972.4876241513199 972.48652993586 25.026 2 -0.9642856781892367 0.2960639905039387 1.0 ['ENST00000524192.6_1_20:61904210-61909556:+|nuORF', 'nc|ENSG00000101199|Q8N6T3-4|ARFGAP1', 'ENST00000519531.5_1_20:61904210-61914317:+|nuORF', 'nc|ENSG00000101199|Q8N6T3-5|ARFGAP1', 'nc|ENSG00000101199|Q8N6T3-3|ARFGAP1', 'ENSG00000101199|ENST00000370283|ARFGAP1', 'nc|ENSG00000101199|Q8N6T3-2|ARFGAP1'] 71759 16403 MEFQDHRYWLR True PC9_epitope_Rep5 1579.7354164919498 1579.73377490379 68.092 3 -0.9643419971248066 0.29607348557400487 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE', 'ENST00000477200.1_1_2:209163383-209167125:+|nuORF'] 31006 9637 GASLGEKKEL True PC9_epitope_Rep4 1030.56587447202 1030.56476993586 44.693 2 -0.9643841820784512 0.2960749932560022 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 70009 14174 LVLWLPFCGP True PC9_epitope_Rep3 1143.61507359391 1143.61396993586 59.604 2 -0.964393709453134 0.2960749932560022 1.0 ['ENSG00000176547|ENST00000319856|OR4C3'] 140624 6741 YRRRHRKHSPQ True NCI_RA007_Epitope_Rep4 1519.8344937999498 1519.83229987172 32.55 4 -0.9644408567154918 0.2960749932560022 1.0 ['ENSG00000125266|ENST00000646441|EFNB2'] 102049 4519 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 22.262 3 -0.9644733928975043 0.2960844876653943 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 105725 20982 SSFCPPDD True NCI_RA007_Epitope_Rep1 866.3116339352998 866.31052993586 85.866 2 -0.964490722143011 0.2960939818186723 1.0 ['nc|ENSG00000161905|P16050-2|ALOX15', 'ENSG00000161905|ENST00000293761|ALOX15'] 76068 26554 NMERPVRYI True PC9_epitope_Rep2 1176.6073624445198 1176.60571490379 108.71 3 -0.9645336877577326 0.2961034757158464 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 68844 16451 LTMCYRPFF True PC9_epitope_Rep3 1176.5460080579198 1176.54490993586 68.417 2 -0.9645631612436546 0.29611296935692705 1.0 ['ENST00000356721.3_1_16:48396017-48396254:-|nuORF'] 131929 20983 VTRSRKWR True PC9_epitope_Rep2 1087.6362945040298 1087.6351899358601 86.162 2 -0.9645993736912656 0.29613594982803965 1.0 ['ENST00000309117.10_1_21:38639566-38639725:-|nuORF'] 84703 6942 QDLSKAPEP True H1975_Epitope_Rep2 983.4923751785899 983.49126993586 31.622 2 -0.9646562297050142 0.2961374548200896 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 44450 24438 ILKARRVPAHG True H1975_Epitope_Rep3 1216.7516586094398 1216.75056993586 101.73 2 -0.9646622005864833 0.2961374548200896 1.0 ['ENSG00000132467|ENST00000254803|UTP3'] 7044 14350 AQQIAYEI True PC9_epitope_Rep2 934.47599683846 934.47544496793 60.459 1 -0.9646794697163005 0.2961374548200896 1.0 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 90724 6325 REQYEEEQKAK True NCI_RA007_Epitope_Rep4 1436.6895714149998 1436.68792490379 30.932 3 -0.9647114257106043 0.2961429534726905 1.0 ['MYH13|p.E1356K|1|0.11|ENSG00000006788|chr17:10313273-10313273|C/T|missense_variant'] 30609 8438 GAKDLLSH True PC9_epitope_Rep5 839.45011644379 839.44900993586 37.399 2 -0.9647296586470678 0.2961429534726905 1.0 ['ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6'] 59899 12801 LGGLCGGV True NCI_RA007_Epitope_Rep1 674.34214621794 674.3415949679301 53.78 1 -0.9647848951121889 0.29616593167995037 1.0 ['ENST00000337451.7_1_15:23034150-23034375:-|nuORF'] 47107 10952 ITTRPNRIYMT True NCI_RA007_Epitope_Rep1 1364.7234548259198 1364.7223499358602 46.595 2 -0.9648141076177493 0.29621588089330025 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 48661 10647 KASKKKKR True PC9_epitope_Rep1 972.6556329662799 972.65452993586 45.845 2 -0.9648679643067712 0.2962363633911836 1.0 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF'] 24580 11526 FAIASFAT True PC9_epitope_Rep4 826.42250471362 826.42140993586 52.096 2 -0.9648946204256333 0.2962363633911836 1.0 ['ENSG00000156860|ENST00000356166|FBRS', 'ENST00000498588.1_1_16:30671247-30671787:+|nuORF', 'ENST00000484152.1_1_16:30671247-30673851:+|nuORF'] 16020 9882 EDTGWLLFPV True H1975_Epitope_Rep1 1175.58627556343 1175.5851699358602 42.944 2 -0.9648987725455711 0.2962363633911836 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 139022 6949 YLAEVAC[Carbamidomethyl]GDDR True H1975_Epitope_Rep3 1267.5503013403 1267.54920993586 31.691 2 -0.9649006052921898 0.2962363633911836 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ'] 46 11151 AAAEFFHSNYD True H1975_Epitope_Rep3 1270.5254662120199 1270.52436993586 47.987 2 -0.9649013759154287 0.2962363633911836 1.0 ['ENSG00000065060|ENST00000192788|BLTP3A'] 11256 20292 DEFLRLLLT True PC9_epitope_Rep1 1118.6335601090198 1118.6324699358602 82.88 2 -0.9650232608415907 0.29629979233528414 1.0 ['ENSG00000173611|ENST00000336505|SCAI', 'nc|ENSG00000173611|Q8N9R8-2|SCAI'] 79631 3354 PDMKIEEVPE True H1975_Epitope_Rep3 1185.5587404862497 1185.55708490379 17.702 3 -0.9650578617691412 0.2963012904356737 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10', 'nc|ENSG00000170325|Q9NQV6-2|PRDM10', 'nc|ENSG00000170325|Q9NQV6-1|PRDM10', 'nc|ENSG00000170325|Q9NQV6-5|PRDM10'] 58640 11145 LERECWQTLCP True PC9_epitope_Rep3 1376.6216921793198 1376.6205899358602 47.868 2 -0.965065176733221 0.2963012904356737 1.0 ['ENST00000454520.6_1_12:50388252-50390839:-|nuORF'] 10859 21550 CVKVYNKLKL True PC9_epitope_Rep6 1206.71585026434 1206.71474993586 95.767 2 -0.9651019903930238 0.2963012904356737 1.0 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 56782 14627 LDLYSFFSFLF True NCI_RA007_Epitope_Rep2 1397.69074063197 1397.6896499358602 61.562 2 -0.9651136094482184 0.29632426309970067 1.0 ['ENST00000477947.1_1_12:46287367-46287505:+|nuORF'] 94352 14274 RRRLPFIRMTL True PC9_epitope_Rep6 1457.8765418527296 1457.87488490379 66.795 3 -0.9651585038682917 0.29636071895689226 1.0 ['ENST00000262113.8_1_8:2026969-2037879:+|nuORF'] 27286 20498 FLQQRMPTL True PC9_epitope_Rep5 1132.60629981536 1132.60520993586 83.885 2 -0.9652507292131343 0.2963796939257062 1.0 ['ENSG00000168143|ENST00000306858|FAM83B'] 64104 17064 LPDPVLGA True PC9_epitope_Rep1 780.4381547777599 780.43704993586 70.462 2 -0.9652590153978142 0.2963796939257062 1.0 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 42781 12375 IENGKKQKN True PC9_epitope_Rep1 1057.58800689893 1057.5869099358601 52.459 2 -0.9653022433077257 0.2963851847856864 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 30971 7125 GASATQAQAW True PC9_epitope_Rep2 989.4566583762097 989.45556993586 32.8 2 -0.9653068284929384 0.2963851847856864 1.0 ['ENST00000491370.1_1_2:220435199-220436548:-|nuORF'] 67758 10445 LSYMAYWK True PC9_epitope_Rep4 1060.50518879176 1060.50408993586 47.888 2 -0.9653959748174563 0.2964081544601445 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 117448 20042 TVQLSKPSL True PC9_epitope_Rep2 971.5651461960299 971.56404993586 82.496 2 -0.9654464378480192 0.296440609410813 1.0 ['nc|ENSG00000135365|Q96BD5-2|PHF21A', 'nc|ENSG00000135365|Q96BD5|PHF21A', 'ENSG00000135365|ENST00000676320|PHF21A', 'ENST00000527753.5_1_11:45959861-45986961:-|nuORF', 'ENST00000527401.5_1_11:45957138-45987102:-|nuORF'] 12435 8293 DIVNQFTTSQ True H1975_Epitope_Rep3 1151.54586730343 1151.5447699358601 36.884 2 -0.9654732641166087 0.296440609410813 1.0 ['ENSG00000177303|ENST00000321617|CASKIN2', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 6479 7203 APSNGLGQEE True PC9_epitope_Rep2 1000.4461532621599 1000.44504993586 33.096 2 -0.9655528035845775 0.2964880350522413 1.0 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 57459 8956 LECGHMVT True PC9_epitope_Rep4 888.38335940692 888.38226993586 41.995 2 -0.9655698318090614 0.2964880350522413 1.0 ['nc|ENSG00000092871|Q8WZ73-3|RFFL', 'nc|ENSG00000092871|Q8WZ73-2|RFFL', 'ENSG00000092871|ENST00000394597|RFFL', 'ENSG00000170633|ENST00000361234|RNF34', 'nc|ENSG00000170633|Q969K3-2|RNF34'] 105909 6620 SSRRRRSI True NCI_RA007_Epitope_Rep3 1016.5951579680399 1016.59406993586 33.1 2 -0.9655720000761099 0.2964880350522413 1.0 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 123890 18296 VGRRRRHR True NCI_RA007_Epitope_Rep5 1091.6649092937098 1091.66437496793 77.175 1 -0.9655724603818827 0.2964880350522413 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 118221 22496 TYLDIFRDF True PC9_epitope_Rep2 1188.5815245361598 1188.5804299358601 92.02 2 -0.9656104002646734 0.2964880350522413 1.0 ['ENSG00000072818|ENST00000158762|ACAP1'] 120243 3317 VECPPPRTTA True H1975_Epitope_Rep2 1069.52262976105 1069.5215299358601 17.43 2 -0.9656420885527841 0.2965110008628128 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 109967 20151 TEHYRSHSEEK True H1975_Epitope_Rep1 1401.62730551161 1401.62620993586 83.861 2 -0.9657038483580804 0.2965259709621321 1.0 ['ENSG00000146587|ENST00000396912|RBAK'] 78744 7791 PAAEEAGRWRR True H1975_Epitope_Rep1 1297.6639658038498 1297.66286993586 34.924 2 -0.9657110080286805 0.2965259709621321 1.0 ['ENST00000333942.10_1_17:30469548-30498062:+|nuORF'] 132955 14239 VVPAPRHW True PC9_epitope_Rep4 960.529369824 960.52826993586 62.676 2 -0.9657216742824677 0.2965259709621321 1.0 ['ENST00000413658.6_1_7:99677240-99679302:-|nuORF'] 132896 24304 VVLVIYLAPL True NCI_RA007_Epitope_Rep2 1098.7052684973 1098.7041699358601 102.07 2 -0.9657664576071654 0.29654893502291724 1.0 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2', 'ENST00000472623.1_1_X:69646726-69652182:+|nuORF'] 7772 7132 ASRSRCDSR True NCI_RA007_Epitope_Rep4 1036.4832245605598 1036.48212993586 34.052 2 -0.9657855896137468 0.29655442020975437 1.0 ['ENST00000580750.5_1_17:79994503-79995558:-|nuORF'] 91971 24596 RKPVPAEA True PC9_epitope_Rep4 866.4974009893798 866.49630993586 103.1 2 -0.9658308180019385 0.29655442020975437 1.0 ['ENST00000530928.5_1_11:65630557-65632047:+|nuORF'] 91401 15166 RHHYHLRRRRH True NCI_RA007_Epitope_Rep2 1622.89915974518 1622.8980699358601 63.684 2 -0.9658656341613046 0.2965559075284761 1.0 ['FASLG|p.D16Afs*56|1|0.17|ENSG00000117560|chr1:172659248-172659248|A/-|frameshift_variant'] 15493 4182 EALVTDLHT True PC9_epitope_Rep6 997.50802524273 997.50692993586 23.034 2 -0.9658826488100832 0.2965559075284761 1.0 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292', 'ZNF292|p.I1609Mfs*13|1|0.25|ENSG00000188994|chr6:87258456-87258457|AA/-|frameshift_variant', 'ZNF292|p.L1719Ffs*6|1|0.39|ENSG00000188994|chr6:87258778-87258779|-/C|frameshift_variant'] 137571 8035 YEEMMHKTRKY True H1975_Epitope_Rep3 1514.70100512918 1514.6999099358602 35.879 2 -0.9658916302926263 0.2965559075284761 1.0 ['PCLO|p.H1926R|1|0.14|ENSG00000186472|chr7:82955176-82955176|T/C|missense_variant'] 62096 5114 LLEATAKP True H1975_Epitope_Rep1 841.4909186266099 841.48982993586 24.741 2 -0.9658926852275093 0.2965653896961691 1.0 ['ENSG00000136770|ENST00000376980|DNAJC1'] 93731 9823 RRAAWYCVLG True PC9_epitope_Rep5 1193.61278217813 1193.61168993586 42.751 2 -0.9659488598711874 0.2966113118024478 1.0 ['ENST00000424086.5_1_2:120436761-120437079:+|nuORF'] 139324 11035 YLKYSKSFGP True PC9_epitope_Rep4 1188.6179100448799 1188.61627490379 50.222 3 -0.965957899184315 0.2966113118024478 1.0 ['nc|ENSG00000140265|Q8IWY8-4|ZSCAN29', 'ENSG00000140265|ENST00000684362|ZSCAN29', 'ENST00000566849.5_1_15:43653273-43656590:-|nuORF', 'nc|ENSG00000140265|Q8IWY8-2|ZSCAN29'] 104611 22603 SQRRHRAV True PC9_epitope_Rep3 1008.5689432201998 1008.56784993586 92.211 2 -0.9660734768658917 0.2966127967004084 1.0 ['nc|ENSG00000106328|Q9NQT6-2|FSCN3', 'ENSG00000106328|ENST00000265825|FSCN3'] 62897 9123 LLNNFAQQI True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 40.029 2 -0.9660874400518442 0.2966127967004084 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 70265 17515 LVRLFRKENRR True NCI_RA007_Epitope_Rep5 1485.9004481014497 1485.89934993586 74.162 2 -0.9661148947103525 0.2966127967004084 1.0 ['ENST00000494664.5_1_3:119236092-119236149:+|nuORF'] 28580 6866 FSGDLDDQTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep1 1312.53537955215 1312.5342899358602 30.711 2 -0.9661554488024007 0.29661976386867217 1.0 ['ENSG00000138385|ENST00000260956|SSB', 'ENST00000470621.1_1_2:170665037-170666957:+|nuORF', 'ENST00000438469.2_1_1:146553889-146554591:-|nuORF'] 44814 8530 INAENEVPILK True H1975_Epitope_Rep1 1238.6870522338597 1238.6859499358602 37.739 2 -0.9661753763159041 0.29661976386867217 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B', 'ENST00000251181.8_1_14:105360511-105361292:+|nuORF'] 57068 7859 LDSHYQTEP True PC9_epitope_Rep6 1088.47745339044 1088.47634993586 39.632 2 -0.9661795627340756 0.29661976386867217 1.0 ['ENSG00000218336|ENST00000511685|TENM3'] 69015 12516 LTPWQKRQAV True PC9_epitope_Rep4 1225.69314067381 1225.69150490379 55.963 3 -0.9662069318616437 0.29661976386867217 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 55249 8064 LADKVNSSWQR True H1975_Epitope_Rep1 1302.66804812478 1302.6669499358602 35.961 2 -0.9662646913791303 0.29661976386867217 1.0 ['ENSG00000147471|ENST00000328195|PLPBP'] 109111 18495 TALLLLKE True PC9_epitope_Rep1 899.56916894731 899.56806993586 75.933 2 -0.9663111767016573 0.29662924376996375 1.0 ['ENSG00000107651|ENST00000369075|SEC23IP'] 17160 10527 EGQPGKVIEV True PC9_epitope_Rep3 1054.56587447202 1054.56476993586 45.432 2 -0.9663286823964623 0.2966387234157255 1.0 ['nc|nan|Q9H0W9-4|C11orf54', 'nc|nan|Q9H0W9-2|C11orf54', 'ENSG00000182919|ENST00000354421|C11orf54'] 110661 8677 TFYNFTWERER True H1975_Epitope_Rep3 1547.7157265931899 1547.71462993586 38.375 2 -0.9663799785227681 0.2966482028059677 1.0 ['ENST00000510737.1_1_4:120160395-120160458:+|nuORF'] 122822 11922 VGGSGGPR True NCI_RA007_Epitope_Rep5 685.35073675569 685.3501849679301 52.514 1 -0.9664157277839991 0.2966576819407008 1.0 ['ENST00000371851.1_1_9:136857425-136857656:-|nuORF'] 18319 14068 EISFWLNL True PC9_epitope_Rep4 1020.5280324113199 1020.52692993586 62.023 2 -0.9664541264568296 0.29666716081993505 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'DYNC1H1|p.D2045Tfs*4|1|0.31|ENSG00000197102|chr14:102009995-102009995|C/-|frameshift_variant'] 118861 12856 VAATHPTV True PC9_epitope_Rep1 794.42865272322 794.42754993586 54.325 2 -0.9665537283782263 0.29669959435602333 1.0 ['nc|ENSG00000056487|Q96EK2-4|PHF21B', 'nc|ENSG00000056487|Q96EK2-3|PHF21B', 'ENSG00000056487|ENST00000313237|PHF21B'] 97771 11066 SEIYPQSHSY True H1975_Epitope_Rep3 1209.53021723929 1209.52912993586 47.657 2 -0.9666412511224786 0.29669959435602333 1.0 ['ENSG00000137101|ENST00000259633|CD72'] 118048 12997 TYFFKRTQYFR True H1975_Epitope_Rep1 1555.79358299107 1555.7924899358602 55.073 2 -0.9667389299820168 0.29670507378209016 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'nc|ENSG00000183605|Q6P4A7-3|SFXN4'] 135504 7670 WKCRNLSL True PC9_epitope_Rep1 1018.5382202555398 1018.53712993586 34.324 2 -0.9667710530536675 0.29670507378209016 1.0 ['ENST00000393785.6_1_3:114219230-114343790:-|nuORF'] 71558 7343 MATDFQLVTR True PC9_epitope_Rep5 1180.59104367404 1180.58938490379 33.205 3 -0.966816531652979 0.29673750454808845 1.0 ['ENST00000541834.1_1_12:121017123-121017560:-|nuORF'] 130013 6354 VSAGLQFP True NCI_RA007_Epitope_Rep3 817.4334037504899 817.43230993586 31.997 2 -0.9668182323342591 0.29673750454808845 1.0 ['ENST00000538786.1_1_11:63426720-63439187:-|nuORF', 'ENST00000535789.1_1_11:63438917-63439196:-|nuORF'] 65640 8769 LSAHKISGNF True NCI_RA007_Epitope_Rep3 1072.56654317836 1072.5654499358602 41.582 2 -0.966881105420679 0.2967604570935748 1.0 ['nc|ENSG00000107951|Q9NVV4-2|MTPAP', 'ENST00000488290.5_1_10:30602540-30654262:-|nuORF', 'MTPAP|p.G449Wfs*7|1|0.38|ENSG00000107951|chr10:30316004-30316005|-/A|frameshift_variant', 'ENSG00000107951|ENST00000263063|MTPAP'] 59366 16752 LFLDINRTL True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 72.404 2 -0.9669120333440347 0.2967968844749289 1.0 ['ENST00000534275.1_1_11:84473191-84511574:+|nuORF'] 106975 7976 SVEFTRALEV True PC9_epitope_Rep4 1149.60298825673 1149.60188993586 38.125 2 -0.9669606989277137 0.29680636032879665 1.0 ['ENST00000380241.7_1_X:16720981-16730968:-|nuORF'] 19466 8317 ELNLTEHFGK True NCI_RA007_Epitope_Rep1 1186.59823722946 1186.5971499358602 36.352 2 -0.9669746540962482 0.2968158359272884 1.0 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant', 'UTP20|p.Y104Ifs*28|1|0.33|ENSG00000120800|chr12:101285863-101285863|C/-|frameshift_variant', 'ENST00000551825.1_1_12:101673946-101684681:+|nuORF'] 11228 4715 DEDYEEVVEYY True NCI_RA007_Epitope_Rep2 1451.56163650687 1451.5605299358601 22.968 2 -0.9670186300645892 0.29682826268560186 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant', 'NEB|p.D1129Rfs*3|1|0.2|ENSG00000183091|chr2:151678058-151678059|-/T|frameshift_variant', 'NEB|p.D542Ifs*15|1|0.43|ENSG00000183091|chr2:151695629-151695629|A/-|frameshift_variant'] 31098 10549 GAVGALPG True NCI_RA007_Epitope_Rep1 640.3544251538 640.3538749679301 45.017 1 -0.9670235381244439 0.29682826268560186 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'POLE|p.I2048M|1|0.24|ENSG00000177084|chr12:132632501-132632501|G/C|missense_variant', 'ENST00000544414.1_1_12:133209229-133212540:-|nuORF'] 82814 23726 PRRRRTRRTLT True NCI_RA007_Epitope_Rep4 1467.8970940565098 1467.89545490379 102.88 3 -0.9670362583967611 0.29682826268560186 1.0 ['ENST00000259818.7_1_6:3227772-3227856:-|nuORF'] 19990 7711 ELWRKNYNNTW True PC9_epitope_Rep2 1522.7317110104996 1522.73005490379 35.036 3 -0.9670456874802174 0.29682826268560186 1.0 ['IGSF3|p.K1161Rfs*33|1|0.26|ENSG00000143061|chr1:116577417-116577417|C/-|frameshift_variant', 'ENSG00000143061|ENST00000369486|IGSF3', 'nc|ENSG00000143061|O75054-2|IGSF3'] 80791 17753 PHLILELL True PC9_epitope_Rep4 946.58515336462 946.58404993586 76.31 2 -0.9670465846733822 0.29682826268560186 1.0 ['NR5A2|p.A436Rfs*9|1|0.13|ENSG00000116833|chr1:200120882-200120883|-/C|frameshift_variant', 'nc|ENSG00000116833|O00482-4|NR5A2', 'nc|ENSG00000116833|O00482-2|NR5A2', 'ENSG00000116833|ENST00000367362|NR5A2'] 109231 5295 TARKSQWK True NCI_RA007_Epitope_Rep3 1003.5563128478299 1003.55520993586 27.837 2 -0.9670557696727752 0.29682826268560186 1.0 ['ENSG00000140521|ENST00000268124|POLG'] 99611 9411 SIFFCIYVVE True H1975_Epitope_Rep1 1218.5994830994198 1218.59838993586 41.111 2 -0.9670587268586034 0.29682826268560186 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 78693 12032 NYYSTLSFT True PC9_epitope_Rep5 1094.49204082542 1094.49094993586 51.275 2 -0.9670733948050755 0.29683773696762283 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 132322 15050 VTYHPTEV True PC9_epitope_Rep1 944.46034677432 944.45924993586 62.707 2 -0.9671795103916802 0.2969011048234977 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 74484 10134 NFDVGKVQ True H1975_Epitope_Rep3 905.4606811274898 905.45958993586 44.025 2 -0.9672488634418274 0.29691646572279173 1.0 ['ENSG00000016602|ENST00000370563|CLCA4'] 49165 16698 KELFQEGTSS True PC9_epitope_Rep1 1124.5349682665599 1124.5338699358601 69.057 2 -0.9672577115115827 0.29691646572279173 1.0 ['ENSG00000198173|ENST00000358047|FAM47C'] 8165 10376 ATERKSVL True PC9_epitope_Rep5 902.5185303567799 902.51742993586 44.896 2 -0.9672585778696741 0.29691646572279173 1.0 ['ENST00000514473.2_1_14:22849590-22849821:-|nuORF'] 62111 7361 LLEEETEP True H1975_Epitope_Rep3 958.4495073070999 958.44840993586 33.289 2 -0.9672710794645496 0.29691646572279173 1.0 ['nc|ENSG00000100583|Q9P1V8-2|SAMD15', 'SAMD15|p.C565Ffs*25|1|0.33|ENSG00000100583|chr14:77380387-77380387|G/-|frameshift_variant', 'ENSG00000100583|ENST00000216471|SAMD15'] 92491 4457 RLWKTVWQFL True PC9_epitope_Rep1 1375.7764763749499 1375.7748449037902 22.028 3 -0.9672971030782064 0.29691646572279173 1.0 ['L1MB8_dup3477|chr3:193839654-193840532:-|1.5524176989395386|0.3003449133866926|2.37|523.0|4|1|sense'] 141851 9503 YVDIAIPC[Carbamidomethyl]NNK True H1975_Epitope_Rep3 1305.63872242188 1305.63762993586 41.558 2 -0.9673121955104192 0.29691646572279173 1.0 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF', 'ENST00000467439.1_1_4:81082717-81082801:+|nuORF', 'ENST00000416785.1_1_6:28699967-28700618:+|nuORF'] 86775 8674 QLLQQYRVP True H1975_Epitope_Rep2 1143.64004247179 1143.6389499358602 38.325 2 -0.9673245592774736 0.29691646572279173 1.0 ['ENST00000370177.1_1_20:62152208-62152943:+|nuORF', 'ENST00000370179.7_1_20:62152139-62153033:+|nuORF'] 64835 6709 LQDGAAPTP True H1975_Epitope_Rep3 868.42904664604 868.4284949679301 30.761 1 -0.9673343538262669 0.29691646572279173 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF'] 33441 10116 GLALLWYDWLP True NCI_RA007_Epitope_Rep1 1345.7070594024499 1345.7059699358601 43.359 2 -0.9673383528659967 0.29691646572279173 1.0 ['ENST00000555918.1_1_14:36295434-36295554:-|nuORF'] 125246 25636 VIKTVIALT True NCI_RA007_Epitope_Rep1 956.6270181765999 956.62646496793 106.11 1 -0.9673383833603835 0.29691646572279173 1.0 ['ENSG00000175764|ENST00000321582|TTLL11', 'ENST00000474723.5_1_9:124736354-124752043:-|nuORF', 'nc|ENSG00000175764|Q8NHH1-2|TTLL11'] 25580 14433 FELCPSEASPY True H1975_Epitope_Rep2 1241.52744035797 1241.52634993586 60.67 2 -0.9673493069677985 0.29691646572279173 1.0 ['ENSG00000172071|ENST00000303236|EIF2AK3'] 125247 25621 VIKTVIALT True NCI_RA007_Epitope_Rep5 956.6270181765999 956.62646496793 106.09 1 -0.9673495160351819 0.29691646572279173 1.0 ['ENSG00000175764|ENST00000321582|TTLL11', 'ENST00000474723.5_1_9:124736354-124752043:-|nuORF', 'nc|ENSG00000175764|Q8NHH1-2|TTLL11'] 113376 20346 TLRWRKRWRWR True PC9_epitope_Rep3 1698.9807641108196 1698.97912490379 83.509 3 -0.9673561749608155 0.29691646572279173 1.0 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 124701 20100 VGYSIQKLL True PC9_epitope_Rep5 1019.6015317047498 1019.60042993586 82.361 2 -0.967461244671862 0.29693140794223827 1.0 ['ENST00000446006.1_1_7:64324607-64324745:+|nuORF'] 66478 4410 LSHAADLGTA True H1975_Epitope_Rep2 954.4770594676199 954.47596993586 22.071 2 -0.967481855687949 0.29693140794223827 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 63315 21186 LLSVGSILQ True PC9_epitope_Rep3 928.5593325395998 928.55878496793 86.78 1 -0.9674915704487812 0.29693140794223827 1.0 ['ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 117760 25579 TVVLRVRPQ True NCI_RA007_Epitope_Rep5 1066.66111226954 1066.6600099358602 105.93 2 -0.9675590693541031 0.2969882276878317 1.0 ['nc|ENSG00000139626|P26010-2|ITGB7', 'ENSG00000139626|ENST00000267082|ITGB7'] 116075 8706 TSQAKPEAL True PC9_epitope_Rep5 943.4974605590298 943.49636993586 38.429 2 -0.9675824487257078 0.2969882276878317 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 98335 10667 SEWQQRERRRY True NCI_RA007_Epitope_Rep1 1592.7920198512797 1592.79092993586 45.481 2 -0.967593186920679 0.2969882276878317 1.0 ['ZSCAN16|p.T257Ifs*36|1|0.08|ENSG00000196812|chr6:28129672-28129673|-/TCTTTGTT|frameshift_variant', 'ENSG00000196812|ENST00000340487|ZSCAN16'] 33926 8196 GLRKIIVRVLL True NCI_RA007_Epitope_Rep4 1278.8863611770998 1278.8847149037902 38.314 3 -0.9675989099987741 0.2969882276878317 1.0 ['ENST00000464167.5_1_3:197676878-197677004:+|nuORF'] 70228 24018 LVQPTMVVIAL True PC9_epitope_Rep4 1182.7046168743 1182.70297490379 100.85 3 -0.9676029278136125 0.2969882276878317 1.0 ['ENSG00000161509|ENST00000293190|GRIN2C'] 98788 14867 SGKAKTKA True NCI_RA007_Epitope_Rep4 789.4708518883699 789.46974993586 64.649 2 -0.9676196726332648 0.2969882276878317 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'ENST00000527366.1_1_4:100870515-100871327:-|nuORF', 'ENST00000511348.1_1_4:100870606-100871327:-|nuORF', 'ENST00000511203.1_1_4:100870606-100870912:-|nuORF'] 20484 12724 EPKYRFER True PC9_epitope_Rep5 1123.57744221523 1123.5763499358602 53.95 2 -0.9676493158178489 0.2970206346640806 1.0 ['nc|ENSG00000203970|Q30KQ9-2|DEFB110'] 91109 24714 RFRLTYLMR True NCI_RA007_Epitope_Rep1 1254.7019315357 1254.70027490379 102.33 3 -0.9676503663003501 0.2970206346640806 1.0 ['ENST00000475716.5_1_20:17934824-17937653:-|nuORF', 'ENST00000483485.5_1_20:17934679-17937653:-|nuORF'] 2174 24778 AELTQEIVFQ True H1975_Epitope_Rep3 1176.60265390356 1176.60100490379 103.05 3 -0.967759911350262 0.2970974476395717 1.0 ['ENST00000368194.7_1_1:157015019-157015145:-|nuORF'] 11392 5774 DESETEWWWAR True H1975_Epitope_Rep1 1493.62115750201 1493.62006993586 27.28 2 -0.9677934787039818 0.29710291324902016 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B', 'ENST00000555825.5_1_14:104201493-104202681:-|nuORF', 'ENST00000556334.5_1_14:104201493-104205387:-|nuORF'] 20265 11177 ENPKANEQL True PC9_epitope_Rep2 1041.50908787189 1041.50798993586 48.319 2 -0.967795699731459 0.29710291324902016 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1'] 48807 9806 KDQLQEYEK True NCI_RA007_Epitope_Rep1 1179.5771674317095 1179.57606993586 42.146 2 -0.9678092235255147 0.29711238013145136 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'YLPM1|p.Q1101Lfs*31|1|0.16|ENSG00000119596|chr14:74798598-74798599|-/T|frameshift_variant', 'YLPM1|p.V675Cfs*24|1|0.33|ENSG00000119596|chr14:74782066-74782066|G/-|frameshift_variant'] 128347 23707 VPQLSALPEL True PC9_epitope_Rep2 1065.60701100801 1065.6059099358602 96.659 2 -0.9678444431031467 0.2971218467588789 1.0 ['ENST00000493538.5_1_2:25799677-25799803:-|nuORF', 'ENST00000496972.6_1_2:25754434-25799812:-|nuORF'] 101581 5431 SLLNDAVTV True PC9_epitope_Rep6 930.5022115863 930.50110993586 28.804 2 -0.9678607754138066 0.29712330980983676 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENST00000564812.5_1_16:67286693-67289803:+|nuORF', 'ENST00000564704.5_1_16:67272241-67289541:+|nuORF', 'ENSG00000135740|ENST00000299798|SLC9A5', 'nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 77778 6637 NTRTMEVP True H1975_Epitope_Rep2 946.4542158480599 946.45310993586 30.437 2 -0.9678705626938837 0.29712330980983676 1.0 ['nc|ENSG00000136059|O15195-2|VILL', 'ENSG00000136059|ENST00000383759|VILL'] 57668 7154 LEEEVSKNLTK True H1975_Epitope_Rep1 1288.6874461566797 1288.68634993586 32.541 2 -0.9678732592072148 0.29712330980983676 1.0 ['ENSG00000162745|ENST00000294794|OLFML2B'] 80624 5934 PGRTSDSPW True PC9_epitope_Rep6 1001.4566583762099 1001.45556993586 31.117 2 -0.9679662872271451 0.2971571703677768 1.0 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5', 'ENST00000522327.1_1_8:103372297-103373424:-|nuORF'] 120877 7590 VEMYDLRWDRW True PC9_epitope_Rep3 1567.7241831019098 1567.7225249037901 34.193 3 -0.9680728622891148 0.2971571703677768 1.0 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 104678 6493 SQTQMLDSNLQ True H1975_Epitope_Rep3 1263.5765158087102 1263.57540993586 29.945 2 -0.9680804017195013 0.2971571703677768 1.0 ['ENSG00000152672|ENST00000272367|CLEC4F', 'nc|ENSG00000152672|Q8N1N0-2|CLEC4F'] 128277 14486 VPPLLAAP True PC9_epitope_Rep2 776.4796256669199 776.47852993586 60.99 2 -0.9681094855671436 0.2971571703677768 1.0 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 103658 21278 SPVDLYILM True PC9_epitope_Rep3 1049.54671925057 1049.54562993586 87.141 2 -0.968112191837817 0.2971571703677768 1.0 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ITGB4|p.S1239Rfs*4|1|0.11|ENSG00000132470|chr17:75751034-75751041|GCTGGGCT/-|frameshift_variant', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 69849 8243 LVHFERWSHRY True NCI_RA007_Epitope_Rep1 1528.76876522556 1528.76710490379 36.063 3 -0.9681558610899486 0.2971801018072127 1.0 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 124011 8777 VGSFRERSR True NCI_RA007_Epitope_Rep3 1092.57883919756 1092.57774993586 41.613 2 -0.9681876168503872 0.2971895662478622 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 136599 15846 WWNLRRTCFRI True NCI_RA007_Epitope_Rep1 1549.8088562157297 1549.80774993586 65.734 2 -0.9682013581368816 0.29721249663345006 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 26721 8148 FIVTQYPLP True NCI_RA007_Epitope_Rep4 1076.5906326678798 1076.5895299358601 38.131 2 -0.9682529057465318 0.2972354264014759 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 109127 9319 TALRYQKK True NCI_RA007_Epitope_Rep4 1006.59236400338 1006.5912699358599 42.701 2 -0.9683513831433458 0.2972463475392177 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'ENSG00000121440|ENST00000263666|PDZRN3', 'nc|ENSG00000121440|Q9UPQ7-2|PDZRN3'] 77390 14779 NSFEFQKNL True PC9_epitope_Rep4 1125.5454733806098 1125.54436993586 64.778 2 -0.9683548346994921 0.2972463475392177 1.0 ['ENST00000541657.5_3_12:122240528-122240576:-|nuORF', 'ENST00000429892.5_1_12:122239709-122240576:-|nuORF'] 131099 8383 VTEDVKIK True NCI_RA007_Epitope_Rep1 930.5385970950199 930.53750993586 36.61 2 -0.9683557876755418 0.2972463475392177 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 18580 9187 EKQIWVEKYY True NCI_RA007_Epitope_Rep2 1384.7027022979998 1384.70160993586 40.343 2 -0.9683756267475532 0.2972463475392177 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 11104 14096 DCWHGASC True NCI_RA007_Epitope_Rep4 877.28470799481 877.28415496793 61.501 1 -0.968427198342241 0.29727473474443905 1.0 ['ENST00000255499.2_2_X:105969946-105970231:+|nuORF'] 30911 7436 GAQLHVTYL True NCI_RA007_Epitope_Rep2 1000.5341804209199 1000.53308993586 33.552 2 -0.968450311197111 0.29727473474443905 1.0 ['ENSG00000077514|ENST00000263681|POLD3', 'nc|ENSG00000077514|Q15054-2|POLD3'] 75252 19324 NIEIFLLWFWW True PC9_epitope_Rep5 1565.80710779689 1565.8054649037902 79.374 3 -0.968456354996665 0.29727473474443905 1.0 ['ENST00000502346.1_1_5:82350650-82350776:-|nuORF'] 25068 26888 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 111.48 2 -0.9684872040988799 0.2972841966365509 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 127269 20361 VLYRVALAI True PC9_epitope_Rep4 1016.6382515666397 1016.63714993586 86.462 2 -0.9685132764208274 0.2972856527358897 1.0 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 70079 7672 LVNQPPHS True PC9_epitope_Rep1 890.4610154806601 890.45990993586 34.332 2 -0.968522108061099 0.2972856527358897 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 62301 9836 LLFYHFWRYFH True NCI_RA007_Epitope_Rep2 1627.80883913239 1627.8071849037901 42.886 3 -0.968527182321399 0.2972856527358897 1.0 ['CNIH3|p.E134Rfs*20|1|0.2|ENSG00000143786|chr1:224734650-224734650|G/-|frameshift_variant', 'ENSG00000143786|ENST00000272133|CNIH3'] 61450 19457 LIYCSRTVP True PC9_epitope_Rep2 1050.55320161334 1050.55210993586 80.223 2 -0.9685880401690207 0.2972951139714297 1.0 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2', 'ENST00000586441.1_1_19:45867568-45872241:-|nuORF'] 46423 5620 ISSSNLYP True PC9_epitope_Rep1 879.43379767331 879.43270993586 26.443 2 -0.9686263338663003 0.297304574952204 1.0 ['ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 59527 8410 LFSEVILFQLW True NCI_RA007_Epitope_Rep1 1393.7645742785699 1393.76293490379 36.715 3 -0.9686356443271714 0.29731403567822284 1.0 ['ENST00000497194.6_1_11:71713256-71713580:+|nuORF'] 121516 16623 VEYYYTWKKIM True H1975_Epitope_Rep1 1522.7530236186997 1522.75192993586 69.317 2 -0.9686734031202837 0.29735042274759005 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 116660 5129 TVAVEERVP True PC9_epitope_Rep1 998.5396597241798 998.53856993586 24.581 2 -0.9687144206554452 0.2973598826016129 1.0 ['SLC18A1|p.S95R|1|0.37|ENSG00000036565|chr8:20179324-20179324|G/T|missense_variant'] 64131 13949 LPEPLSVTAP True H1975_Epitope_Rep1 1022.56481184286 1022.56370993586 58.81 2 -0.9687454883001068 0.2973828051374566 1.0 ['ENST00000264025.7_1_11:119535043-119535469:-|nuORF'] 70819 5561 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep3 1442.6356288295895 1442.6345299358602 26.436 2 -0.9689844219248558 0.2974191898113868 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 16461 21868 EELFLQTTFDK True NCI_RA007_Epitope_Rep1 1369.6765471198098 1369.6754499358601 89.528 2 -0.9690180767444102 0.2974421109316101 1.0 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant', 'ATM|p.C819Lfs*4|1|0.31|ENSG00000149311|chr11:108259065-108259065|G/-|frameshift_variant', 'ATM|p.I923*|1|0.38|ENSG00000149311|chr11:108268523-108268524|-/TTAGGGCAGCTGA|frameshift_variant', 'ATM|p.T1029Qfs*10|1|0.67|ENSG00000149311|chr11:108272538-108272538|A/-|frameshift_variant'] 113822 15358 TNEISNMQK True PC9_epitope_Rep1 1063.4968089360298 1063.49570993586 63.892 2 -0.9690206284638297 0.2974515690418815 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 32488 201 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 1.0697 2 -0.9690714571725595 0.2974530181465726 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 45733 19258 IRWMHFLILML True PC9_epitope_Rep3 1471.81960414023 1471.81795490379 79.297 3 -0.9690722928984942 0.2974530181465726 1.0 ['ENST00000393346.7_1_11:85723404-85725959:-|nuORF'] 30711 13637 GALGHDALQFP True PC9_epitope_Rep2 1124.56145779792 1124.56036993586 57.746 2 -0.9691150948168191 0.2974530181465726 1.0 ['ENST00000403714.7_1_2:25380894-25381050:+|nuORF'] 13645 11383 DPNLDDLLR True H1975_Epitope_Rep3 1069.54038800017 1069.53928993586 48.897 2 -0.9692140846221537 0.29748138974517746 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant'] 68521 20269 LTGEHLPKSL True PC9_epitope_Rep5 1093.61315901761 1093.61206993586 83.016 2 -0.969216391213241 0.29748138974517746 1.0 ['ENST00000494346.1_1_2:198436734-198482697:-|nuORF'] 33854 3786 GLPGPLHCC True PC9_epitope_Rep5 895.4044292046701 895.40332993586 19.647 2 -0.9692792325567068 0.29748138974517746 1.0 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF'] 6451 17364 APSEVSPPDLW True H1975_Epitope_Rep2 1196.5713537752797 1196.5702499358601 72.084 2 -0.9693325869065903 0.29750430755976737 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A'] 25191 26929 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 110.04 2 -0.9693760354682283 0.2975541466435138 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79172 23201 PANTAIAST True PC9_epitope_Rep4 844.4290466460401 844.4284949679301 97.471 1 -0.9694180820362699 0.2975610412684739 1.0 ['ENSG00000278803|ENST00000458091|PWWP4'] 33281 14419 GKKRRKPRRAR True NCI_RA007_Epitope_Rep3 1407.91235019783 1407.91069490379 64.029 3 -0.9694263402517739 0.2975610412684739 1.0 ['ERCC5|p.L1176P|1|0.29|ENSG00000134899|chr13:102875869-102875869|T/C|missense_variant'] 117449 19337 TVQLSKPSL True PC9_epitope_Rep4 971.5651461960299 971.56404993586 82.488 2 -0.9694398282867936 0.2975610412684739 1.0 ['nc|ENSG00000135365|Q96BD5-2|PHF21A', 'nc|ENSG00000135365|Q96BD5|PHF21A', 'ENSG00000135365|ENST00000676320|PHF21A', 'ENST00000527753.5_1_11:45959861-45986961:-|nuORF', 'ENST00000527401.5_1_11:45957138-45987102:-|nuORF'] 79212 24338 PAPLDTIN True PC9_epitope_Rep1 839.43888305375 839.43833496793 98.445 1 -0.969469428942333 0.2975610412684739 1.0 ['ENSG00000171298|ENST00000302262|GAA'] 83862 20239 PVNTFSLFD True PC9_epitope_Rep2 1038.5022115862998 1038.5016749679298 83.268 1 -0.9695073655177191 0.2975610412684739 1.0 ['ENST00000532094.5_1_11:420655-431830:-|nuORF', 'ENST00000528927.5_1_11:418373-431830:-|nuORF', 'nc|ENSG00000185101|A1A5B4-2|ANO9', 'ENST00000534161.5_1_11:418373-429524:-|nuORF', 'ENSG00000185101|ENST00000332826|ANO9', 'ENST00000526142.5_1_11:419653-429752:-|nuORF'] 19974 7654 ELWEKNGAV True PC9_epitope_Rep5 1044.5240096600398 1044.52290993586 34.387 2 -0.9695995579857105 0.29764324266121106 1.0 ['nc|ENSG00000122378|Q9BRX8-2|PRXL2A', 'ENSG00000122378|ENST00000606162|PRXL2A'] 35690 11707 GTEQCPPCAQC True H1975_Epitope_Rep2 1135.4096508077498 1135.40854993586 50.106 2 -0.9696292963104921 0.29764324266121106 1.0 ['ENST00000378052.5_1_7:148991082-148992133:+|nuORF', 'ENST00000480864.1_1_7:148991400-148992133:+|nuORF', 'ENST00000476295.5_1_7:148991497-148992133:+|nuORF', 'ENST00000481519.5_1_7:148990933-148994165:+|nuORF'] 140420 10871 YRFQWDRCYKI True PC9_epitope_Rep5 1576.7609029638 1576.7592449037902 46.803 3 -0.9696343303701046 0.29764324266121106 1.0 ['TRPC1|p.S509Tfs*48|1|0.08|ENSG00000144935|chr3:142792911-142792912|-/CT|frameshift_variant'] 2071 7130 AELDNPMQQK True H1975_Epitope_Rep3 1172.54957278488 1172.54846993586 32.398 2 -0.9696425228476018 0.29765413655267087 1.0 ['ENSG00000172375|ENST00000648610|C2CD2L', 'nc|ENSG00000172375|O14523-2|C2CD2L', 'ENST00000525598.1_1_11:118981556-118982340:+|nuORF', 'ENST00000529874.5_1_11:118980840-118984381:+|nuORF'] 11124 10602 DDEASLGLP True PC9_epitope_Rep5 915.4185415319898 915.41744993586 45.768 2 -0.9696484871100454 0.29765413655267087 1.0 ['PDE3A|p.E978D|1|0.21|ENSG00000172572|chr12:20653955-20653955|A/T|missense_variant'] 142171 17657 YVTGWFSPYH True PC9_epitope_Rep5 1255.56620882519 1255.5651099358602 72.93 2 -0.9696627281179241 0.29765413655267087 1.0 ['ENST00000577944.5_2_17:80397520-80400257:+|nuORF', 'ENST00000337014.10_2_17:80398960-80400257:+|nuORF', 'ENST00000582429.5_3_17:80398119-80400257:+|nuORF', 'ENST00000578616.5_3_17:80398383-80400257:+|nuORF', 'ENSG00000169660|ENST00000327949|HEXD'] 112353 4885 TLAGEEFM True H1975_Epitope_Rep3 896.3949696364399 896.39386993586 23.917 2 -0.9696721382535417 0.29765413655267087 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 102845 11736 SNVEIFKLQPN True NCI_RA007_Epitope_Rep1 1287.6823012065897 1287.6812099358601 49.625 2 -0.9696830979621313 0.29765958305855755 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant'] 82678 10715 PQQPSVKATDS True PC9_epitope_Rep4 1156.57241640444 1156.5713099358602 48.969 2 -0.9697110751460841 0.29765958305855755 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 100605 9166 SLCWGRDSSTV True PC9_epitope_Rep4 1209.54482175761 1209.54372993586 42.85 2 -0.9697846746944845 0.2977108482377165 1.0 ['ENSG00000131899|ENST00000316843|LLGL1', 'ENST00000479155.1_1_17:18137242-18138852:+|nuORF'] 139231 5805 YLGLGPGH True NCI_RA007_Epitope_Rep3 812.41808803952 812.41698993586 29.81 2 -0.9698053791284342 0.2977108482377165 1.0 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP'] 40683 3804 HRRNSNTK True NCI_RA007_Epitope_Rep2 1011.53222335831 1011.53112993586 19.433 2 -0.9698117336050394 0.2977108482377165 1.0 ['ENST00000278618.8_1_11:105967588-105967645:+|nuORF'] 55792 20071 LANKSITYQMF True PC9_epitope_Rep1 1314.6642086143 1314.66256490379 82.03 3 -0.969814338354201 0.2977108482377165 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 819 8542 ACGCDCDC True PC9_epitope_Rep3 788.15976737548 788.1592149679301 37.812 1 -0.9699449407089908 0.2977701220578934 1.0 ['ENST00000451025.6_2_6:43608345-43608465:+|nuORF'] 86787 21089 QLLYVYHL True PC9_epitope_Rep5 1047.57531695691 1047.5742099358602 86.181 2 -0.9699457805235685 0.2977701220578934 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23'] 67663 19182 LSWARKTI True PC9_epitope_Rep5 973.57090028281 973.56980993586 78.82 2 -0.9699723475425356 0.2977755648558087 1.0 ['ENST00000381297.9_1_X:1582972-1583200:-|nuORF'] 112740 12623 TLHELLERI True PC9_epitope_Rep5 1122.6397081186199 1122.63805490379 53.556 3 -0.9699758179777794 0.2977755648558087 1.0 ['ENSG00000122122|ENST00000356892|SASH3'] 138928 25418 YKKKINPIK True PC9_epitope_Rep5 1130.7175645164998 1130.71646993586 103.0 2 -0.9700276221742169 0.2977984713101518 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 81899 12414 PLRYQEKL True PC9_epitope_Rep2 1045.59202965021 1045.59092993586 53.058 2 -0.9700794471877858 0.29784829033950994 1.0 ['ENST00000359890.7_2_14:23370637-23370934:-|nuORF'] 120118 5322 VEAARRYVQFM True H1975_Epitope_Rep3 1368.6972400780799 1368.6961499358601 25.546 2 -0.9701066580067428 0.29784972280531785 1.0 ['ENSG00000115850|ENST00000264162|LCT'] 77840 5263 NVEKLSTETH True NCI_RA007_Epitope_Rep1 1156.57241640444 1156.5713099358602 24.555 2 -0.970129472009022 0.29784972280531785 1.0 ['ENST00000426572.5_1_7:99631593-99631641:+|nuORF'] 138924 25542 YKKKINPIK True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 103.25 2 -0.9701678345244259 0.29784972280531785 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 29950 9592 FWDQWYLWYLR True NCI_RA007_Epitope_Rep1 1674.7983340183398 1674.79669490379 41.307 3 -0.9701969743588332 0.2978511551554784 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 98671 13099 SGDLARLIL True PC9_epitope_Rep6 956.5654805492 956.56438993586 61.998 2 -0.9701975367349491 0.2978511551554784 1.0 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 83838 14064 PVLTHRAP True H1975_Epitope_Rep2 889.51338540669 889.5122899358599 59.249 2 -0.9702177617294873 0.2978511551554784 1.0 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'ENST00000496816.5_1_20:62325699-62327208:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-5|RTEL1', 'ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 138926 25663 YKKKINPIK True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 103.75 2 -0.9702527892279221 0.2978565950404327 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 98535 13662 SFNIRKLI True PC9_epitope_Rep3 989.6022004110899 989.60110993586 57.615 2 -0.9702623646962829 0.2978565950404327 1.0 ['ENST00000590414.6_1_19:38230075-38230369:-|nuORF'] 92399 9429 RLPTPEQI True PC9_epitope_Rep4 952.5341804209199 952.53308993586 43.879 2 -0.9702927848586791 0.2978794973224617 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 38134 18832 HCWRWLVYHWL True PC9_epitope_Rep5 1597.77649345829 1597.77484490379 77.452 3 -0.9703689329174383 0.2979158537733945 1.0 ['ENST00000361781.6_1_10:52067826-52087058:-|nuORF'] 15051 14341 DYPVDTIA True H1975_Epitope_Rep1 892.4178132559999 892.41726496793 60.353 1 -0.9703965961931694 0.2979172833194306 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 114695 8140 TQHLERMKDMY True H1975_Epitope_Rep2 1450.6697050008997 1450.66860993586 36.26 2 -0.970398541947346 0.2979172833194306 1.0 ['ENSG00000204450|ENST00000533122|TRIM64', 'ENSG00000189253|ENST00000329862|TRIM64B'] 6026 6144 APKYLLKNYDR True NCI_RA007_Epitope_Rep5 1379.75613485319 1379.7544949037901 30.313 3 -0.970409227084954 0.2979172833194306 1.0 ['ENSG00000128268|ENST00000341184|MGAT3'] 102477 13715 SLVERYVHDRF True NCI_RA007_Epitope_Rep1 1419.72589735407 1419.72480993586 57.364 2 -0.9704606480035022 0.2979401832443123 1.0 ['ENST00000495458.5_1_5:176729817-176730289:-|nuORF', 'ENST00000471466.5_1_5:176729278-176730289:-|nuORF', 'ENST00000393610.3_1_5:176729603-176730289:-|nuORF', 'ENST00000478234.5_1_5:176729278-176730289:-|nuORF', 'ENSG00000169228|ENST00000303251|RAB24'] 17951 13139 EICDRIKEEF True PC9_epitope_Rep5 1280.607087661 1280.6059899358602 55.543 2 -0.9705077552972271 0.29794562014825976 1.0 ['nc|ENSG00000065717|Q04725-3|TLE2', 'ENSG00000065717|ENST00000262953|TLE2'] 36319 22633 GVEKIIKIWSP True PC9_epitope_Rep2 1268.7492585675998 1268.74816993586 92.553 2 -0.9705130657859001 0.29794562014825976 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5'] 100842 18897 SLEPDIMV True NCI_RA007_Epitope_Rep3 902.44191982886 902.4413749679301 82.621 1 -0.9705381879100492 0.2979550652495628 1.0 ['ENSG00000198826|ENST00000361627|ARHGAP11A', 'nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A'] 39651 10644 HLPLPEQI True H1975_Epitope_Rep1 945.5283667644901 945.52726993586 45.899 2 -0.9705601557337452 0.2979645100967295 1.0 ['ENSG00000149262|ENST00000534064|INTS4'] 13018 12795 DLNEALTQPV True PC9_epitope_Rep5 1098.55570371114 1098.55460993586 54.226 2 -0.9706440867581976 0.2979833990286952 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 83904 17103 PVPTLWNEPAE True NCI_RA007_Epitope_Rep1 1251.6135529404298 1251.6129749679299 70.659 1 -0.9706604633572726 0.2979833990286952 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 129901 20497 VRSPGGKLK True NCI_RA007_Epitope_Rep4 940.5817993196799 940.58070993586 88.757 2 -0.9706981952686986 0.29799284311351465 1.0 ['ENST00000265198.8_1_6:154567882-154587062:-|nuORF', 'ENST00000422970.6_1_6:154567882-154587062:-|nuORF', 'ENST00000519344.5_1_6:154567882-154568747:-|nuORF'] 130524 6167 VSQQLPWLFEK True PC9_epitope_Rep4 1373.73433677945 1373.73268490379 30.751 3 -0.9707418819557403 0.29802919217057916 1.0 ['ENSG00000135763|ENST00000258243|URB2'] 46126 19718 ISKDDFKQMSP True PC9_epitope_Rep2 1294.62273772514 1294.6216499358602 81.235 2 -0.9707671309127242 0.2980480783459112 1.0 ['SLC39A12|p.E331D|1|0.14|ENSG00000148482|chr10:17981380-17981380|G/T|missense_variant'] 59098 11203 LEYDDESYSY True H1975_Epitope_Rep1 1282.48774329062 1282.4866499358602 48.061 2 -0.9707822491270721 0.2980480783459112 1.0 ['ENSG00000099139|ENST00000674117|PCSK5', 'nc|ENSG00000099139|Q92824|PCSK5'] 60474 6002 LGYILKSC True PC9_epitope_Rep5 895.4837250711901 895.48262993586 28.082 2 -0.9708013612277905 0.29806696350502426 1.0 ['KCND1|p.T318I|1|0.57|ENSG00000102057|chrX:48969319-48969319|G/A|missense_variant'] 105064 8030 SRDQEDEEDE True PC9_epitope_Rep3 1250.4534830402197 1250.45238993586 35.863 2 -0.9708045670579836 0.29806696350502426 1.0 ['ENSG00000130528|ENST00000252825|HRC'] 19681 12914 ELRIAKIY True H1975_Epitope_Rep2 1004.6018660579198 1004.60076993586 54.787 2 -0.9708381869654544 0.29807640570352434 1.0 ['nc|ENSG00000100206|Q14565-2|DMC1', 'ENSG00000100206|ENST00000216024|DMC1'] 33616 7029 GLGDLADLTV True H1975_Epitope_Rep3 972.51277627 972.51166993586 31.999 2 -0.9708530474390673 0.298081837991983 1.0 ['nc|ENSG00000196792|Q13033-2|STRN3', 'ENSG00000196792|ENST00000357479|STRN3'] 43024 15814 IETLSEWIKHR True H1975_Epitope_Rep1 1410.76194850962 1410.76084993586 66.135 2 -0.9708606644950187 0.298081837991983 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 105733 12750 SSFLRRLYEEE True PC9_epitope_Rep1 1427.7044932031502 1427.70338993586 53.917 2 -0.9709117100155914 0.29811417195738726 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386'] 24603 6071 FAINSNNP True NCI_RA007_Epitope_Rep1 875.41373093507 875.41262993586 27.652 2 -0.9709316418433576 0.29811417195738726 1.0 ['ENSG00000172766|ENST00000379406|NAA16'] 136587 18083 WWLKLRPLMK True NCI_RA007_Epitope_Rep5 1369.80566832825 1369.8045699358602 76.355 2 -0.9710320155578336 0.2981639652969265 1.0 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 108914 4376 TADEVRLLNR True H1975_Epitope_Rep2 1185.6465844042098 1185.64548993586 21.944 2 -0.9710636705964975 0.2981734054286713 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 56065 13338 LATEEPPP True PC9_epitope_Rep3 852.4228986364399 852.42180993586 56.339 2 -0.9710859266997219 0.2981828453064683 1.0 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 68918 15339 LTNTVYHSL True PC9_epitope_Rep2 1046.53965972418 1046.53856993586 64.281 2 -0.97111105809347 0.2982191854521978 1.0 ['ENST00000596245.1_1_19:8590207-8591472:-|nuORF'] 55263 15041 LADMIVEEEVP True PC9_epitope_Rep3 1243.60060529823 1243.5995099358602 62.984 2 -0.9711239925247878 0.2982246133154001 1.0 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A'] 125265 23461 VILLKIKLHGR True H1975_Epitope_Rep2 1288.87071111296 1288.8696099358601 96.717 2 -0.9711374503459232 0.2982246133154001 1.0 ['ENST00000443046.5_1_21:40717793-40719323:-|nuORF'] 11606 20930 DGFTNYLMSPD True PC9_epitope_Rep1 1258.5176039502599 1258.51650993586 85.328 2 -0.9711470543823316 0.2982300408865935 1.0 ['nc|ENSG00000154822|Q9UPR0-2|PLCL2', 'nc|ENSG00000154822|Q9UPR0-3|PLCL2', 'ENSG00000154822|ENST00000615277|PLCL2'] 136598 15279 WWNLRRTCFRI True H1975_Epitope_Rep3 1549.8088562157297 1549.80774993586 64.179 2 -0.9711543094874688 0.2982300408865935 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 62715 17848 LLLNRRSQ True PC9_epitope_Rep3 998.5985120129801 998.59740993586 73.848 2 -0.9712717918665951 0.29831898870360407 1.0 ['ENST00000323963.9_1_3:186507079-186507190:+|nuORF'] 122171 16124 VGAIMVPL True H1975_Epitope_Rep2 798.4673467310599 798.46679496793 67.234 1 -0.9713230213507782 0.29831898870360407 1.0 ['ENST00000373036.4_1_1:38323346-38325272:-|nuORF'] 21607 7026 ERREREQQDLK True NCI_RA007_Epitope_Rep1 1485.7648020439299 1485.76315490379 31.327 3 -0.9713392746288575 0.29831898870360407 1.0 ['PSMD3|p.E520K|1|0.28|ENSG00000108344|chr17:39997534-39997534|G/A|missense_variant'] 1367 9089 AEEAWAQMEE True H1975_Epitope_Rep2 1192.4706537578397 1192.4695499358602 39.911 2 -0.9713422261737608 0.29831898870360407 1.0 ['ENSG00000103319|ENST00000263026|EEF2K'] 113263 7945 TLRGLWTV True H1975_Epitope_Rep3 944.5443511817999 944.54324993586 35.53 2 -0.9713585215597454 0.29831898870360407 1.0 ['ENST00000272298.11_1_2:47387407-47387581:-|nuORF'] 124064 6411 VGSKTKEGV True PC9_epitope_Rep5 903.5025459394699 903.50144993586 29.637 2 -0.9713926974090618 0.29831898870360407 1.0 ['nc|ENSG00000145335|P37840-2|SNCA', 'ENSG00000145335|ENST00000394991|SNCA'] 79144 11568 PALRARSF True PC9_epitope_Rep2 916.52428444356 916.52318993586 49.821 2 -0.9714234781018577 0.29831898870360407 1.0 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant', 'nc|ENSG00000156222|O00337-2|SLC28A1'] 48308 23352 IYQVRLKMI True PC9_epitope_Rep2 1162.6896355164997 1162.68852993586 95.297 2 -0.9714494408171624 0.29831898870360407 1.0 ['ENST00000526129.5_1_1:76198579-76227103:+|nuORF'] 40163 6181 HQDSSILESR True PC9_epitope_Rep3 1170.5629143499 1170.56125490379 28.817 3 -0.9715003956566967 0.29833384882266717 1.0 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF', 'nc|ENSG00000159788|O14924-7|RGS12', 'nc|ENSG00000159788|O14924-6|RGS12', 'nc|ENSG00000159788|O14924-2|RGS12', 'nc|ENSG00000159788|O14924-3|RGS12', 'nc|ENSG00000159788|O14924-5|RGS12', 'nc|ENSG00000159788|O14924-4|RGS12', 'ENSG00000159788|ENST00000336727|RGS12', 'ENST00000515521.5_1_4:3422373-3428454:+|nuORF'] 60030 10097 LGKNWEEHSV True PC9_epitope_Rep3 1197.57783613805 1197.57619490379 43.792 3 -0.9715012121006852 0.29833384882266717 1.0 ['ENSG00000172000|ENST00000307635|ZNF556'] 123378 3534 VGMIHKAA True NCI_RA007_Epitope_Rep1 825.4530936492499 825.45198993586 17.669 2 -0.9715033145678716 0.29833384882266717 1.0 ['ENST00000521663.1_1_8:58192902-58193274:+|nuORF'] 56615 14604 LDIDECRYGYC True NCI_RA007_Epitope_Rep3 1348.54277315228 1348.54166993586 64.787 2 -0.9715459261382171 0.2983432843849174 1.0 ['ENSG00000140092|ENST00000342058|FBLN5'] 8508 7040 ATSPGEPGL True NCI_RA007_Epitope_Rep3 827.40249754503 827.40140993586 34.809 2 -0.9716051388926917 0.29836616687958045 1.0 ['nc|ENSG00000143554|Q5K4L6-2|SLC27A3', 'ENSG00000143554|ENST00000624995|SLC27A3'] 106478 8980 STKTHVNDLM True NCI_RA007_Epitope_Rep5 1144.55465816532 1144.5535699358602 41.199 2 -0.9716215144255607 0.2983756017534895 1.0 ['KLK7|p.Q107K|1|0.33|ENSG00000169035|chr19:50980390-50980390|G/T|missense_variant'] 19836 11817 ELSSAERYNP True PC9_epitope_Rep1 1164.54111627616 1164.54000993586 50.321 2 -0.9717485591396745 0.2984213640275387 1.0 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 12497 18796 DKELEVLSLH True H1975_Epitope_Rep3 1181.6292030045702 1181.62810993586 78.835 2 -0.9717518731136114 0.2984213640275387 1.0 ['nc|ENSG00000068078|P22607-4|FGFR3', 'ENSG00000068078|ENST00000440486|FGFR3'] 48727 15582 KDDDKAWEY True H1975_Epitope_Rep2 1168.5036681382799 1168.5020249037902 65.092 3 -0.9717724310859975 0.29843079777864434 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 112895 12587 TLKTRVLPN True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 53.441 2 -0.9719334321291973 0.29850746268656714 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 15702 12794 EAVSLQIVT True PC9_epitope_Rep1 958.53351171458 958.53240993586 54.087 2 -0.9720030825814858 0.29853977303286183 1.0 ['ENST00000497184.5_1_7:44089925-44090420:+|nuORF'] 132882 17404 VVLSTVLTI True NCI_RA007_Epitope_Rep2 943.59538369515 943.59428993586 72.44 2 -0.9720133338151672 0.29853977303286183 1.0 ['ENSG00000125255|ENST00000245312|SLC10A2'] 44779 10094 IMGFLGIK True NCI_RA007_Epitope_Rep2 877.5095458962099 877.50844993586 43.853 2 -0.9720576716051705 0.2985626504242131 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2'] 37467 17218 GVTSTCCS True PC9_epitope_Rep5 756.2782256320401 756.27712993586 71.249 2 -0.9720932970843824 0.29857208164143384 1.0 ['ENSG00000184408|ENST00000331113|KCND2'] 84043 14290 PVVPAVMMATL True PC9_epitope_Rep2 1127.60827396131 1127.6066249037901 60.232 3 -0.9721446874046745 0.29857348373825243 1.0 ['BNC2|p.H621L|1|0.15|ENSG00000173068|chr9:16436332-16436332|T/A|missense_variant'] 116521 22135 TTSFAGSS True H1975_Epitope_Rep2 756.3289982516001 756.32790993586 91.489 2 -0.97216407828075 0.29857348373825243 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20', 'ENST00000457750.1_1_3:195341833-195346985:+|nuORF'] 56823 18349 LDNMLYMV True PC9_epitope_Rep5 997.4612753744499 997.46016993586 75.596 2 -0.9721678286464347 0.29857348373825243 1.0 ['ENSG00000187714|ENST00000374115|SLC18A3', 'SLC18A3|p.G240Afs*9|1|0.39|ENSG00000187714|chr10:49611456-49611456|C/-|frameshift_variant', 'SLC18A3|p.W105Cfs*18|1|0.2|ENSG00000187714|chr10:49611054-49611054|G/-|frameshift_variant'] 127040 5527 VLSLCMLHGK True NCI_RA007_Epitope_Rep2 1099.58820722307 1099.58710993586 26.114 2 -0.9722072140061502 0.2985748857219683 1.0 ['ENST00000502774.1_1_4:154579740-154580577:+|nuORF'] 74272 16981 NEIMHHQRRRR True PC9_epitope_Rep3 1531.80147941951 1531.80038993586 70.477 2 -0.9722253808847845 0.2985748857219683 1.0 ['ADAMTS16|p.H77N|1|0.16|ENSG00000145536|chr5:5146183-5146183|C/A|missense_variant'] 30625 10497 GAKGRGGG True NCI_RA007_Epitope_Rep5 658.3510711088599 658.35052496793 47.008 1 -0.9722389253386619 0.2985748857219683 1.0 ['ENST00000595897.5_1_19:42401825-42402293:+|nuORF'] 113199 13485 TLQEFLERIHL True H1975_Epitope_Rep3 1397.76669953689 1397.76560993586 57.146 2 -0.9722701558660566 0.29858571735857176 1.0 ['nc|ENSG00000155307|Q9NSI8-3|SAMSN1', 'ENSG00000155307|ENST00000400566|SAMSN1', 'nc|ENSG00000155307|Q9NSI8-2|SAMSN1'] 42480 15314 IEEELKEQL True PC9_epitope_Rep2 1129.5866694862498 1129.5855699358601 64.186 2 -0.9722916259389214 0.29858571735857176 1.0 ['ENSG00000149548|ENST00000344762|CCDC15', 'CCDC15|p.K519Qfs*8|1|0.12|ENSG00000149548|chr11:124987776-124987777|-/C|frameshift_variant', 'CCDC15|p.R653Efs*31|1|0.23|ENSG00000149548|chr11:124991506-124991506|G/-|frameshift_variant'] 135652 15934 WLLTWQELK True NCI_RA007_Epitope_Rep5 1215.6651945904698 1215.6640899358601 68.015 2 -0.9723056043892127 0.29858571735857176 1.0 ['ENST00000453025.1_1_1:21752008-21754429:-|nuORF'] 45625 12569 IRDHFMEML True PC9_epitope_Rep1 1190.55763537078 1190.55598490379 53.216 3 -0.9723136167267489 0.29858571735857176 1.0 ['ENST00000478571.1_1_1:186368103-186380944:+|nuORF', 'nc|ENSG00000157181|Q5SWX8-4|ODR4', 'nc|ENSG00000157181|Q5SWX8-2|ODR4', 'ENSG00000157181|ENST00000287859|ODR4'] 58400 10229 LENQTFRFDY True H1975_Epitope_Rep3 1331.61461556959 1331.61350993586 44.394 2 -0.972370872050312 0.2985885199623605 1.0 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 57095 19653 LDSQKHIDFS True PC9_epitope_Rep3 1188.5775017848798 1188.57640993586 80.831 2 -0.9723790244900777 0.2985885199623605 1.0 ['ENSG00000170889|ENST00000302907|RPS9', 'ENST00000402367.5_1_19:54711128-54711440:+|nuORF', 'ENST00000495002.5_1_19:54710350-54711440:+|nuORF'] 8857 15420 AVFFMAMI True PC9_epitope_Rep3 928.4550677951999 928.45396993586 64.467 2 -0.9724059015424479 0.2985885199623605 1.0 ['OR2T6|p.G43V|1|0.16|ENSG00000198104|chr1:248387736-248387736|G/T|missense_variant', 'OR2T6|p.A239Cfs*34|1|0.17|ENSG00000198104|chr1:248388319-248388320|-/T|frameshift_variant', 'ENSG00000198104|ENST00000641644|OR2T6'] 31407 5125 GDYFWWLLLPV True NCI_RA007_Epitope_Rep2 1407.72270946659 1407.7216099358602 24.558 2 -0.9724159830853233 0.2985885199623605 1.0 ['ENSG00000141469|ENST00000321925|SLC14A1', 'nc|ENSG00000141469|Q13336-2|SLC14A1'] 65195 11149 LQREWRFLWNF True H1975_Epitope_Rep1 1593.8204664452498 1593.81883490379 47.852 3 -0.972461023409821 0.2985885199623605 1.0 ['ENSG00000215262|ENST00000399881|KCNU1'] 15827 6422 EDEGQWGNPS True PC9_epitope_Rep1 1117.4312314740098 1117.4301299358601 29.509 2 -0.9724890579214517 0.2985885199623605 1.0 ['nc|ENSG00000121903|P17040-3|ZSCAN20', 'ENSG00000121903|ENST00000684572|ZSCAN20', 'nc|ENSG00000121903|P17040-2|ZSCAN20'] 37172 22282 GVQPTRRRQ True PC9_epitope_Rep4 1096.62137271588 1096.62077496793 93.946 1 -0.9725063172737332 0.29859794867658723 1.0 ['ENST00000531072.1_1_11:64808545-64809015:+|nuORF'] 123481 6204 VGPEEARSGAP True PC9_epitope_Rep2 1068.5199869087598 1068.5188899358602 29.258 2 -0.972520233171641 0.29860336321965775 1.0 ['nc|ENSG00000143772|P27987-2|ITPKB', 'ITPKB|p.V836Sfs*16|1|0.34|ENSG00000143772|chr1:226639604-226639604|C/-|frameshift_variant', 'ENSG00000143772|ENST00000429204|ITPKB'] 63346 13197 LLTLEIAR True PC9_epitope_Rep5 927.5753169569099 927.57420993586 55.769 2 -0.9725281202916879 0.29860336321965775 1.0 ['ENST00000513544.5_1_17:48545259-48551043:+|nuORF'] 81693 16268 PLLVSGIG True PC9_epitope_Rep5 754.45889022234 754.45778993586 67.567 2 -0.9725596261679151 0.2986127913541415 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF'] 123128 20144 VGKNYFLNFTE True PC9_epitope_Rep3 1330.6557521055795 1330.65409490379 82.738 3 -0.9726174452274868 0.298635660998723 1.0 ['ENST00000233055.8_1_2:224741082-224741151:-|nuORF'] 19513 12540 ELPKNDLI True PC9_epitope_Rep2 940.5229470308799 940.52184993586 53.54 2 -0.9727297402005807 0.2986773838006398 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 102300 5237 SLSPEELSSVP True NCI_RA007_Epitope_Rep4 1143.56593404167 1143.5648299358602 26.683 2 -0.9727677910834182 0.2986773838006398 1.0 ['nc|ENSG00000102854|Q13421-4|MSLN', 'ENSG00000102854|ENST00000545450|MSLN', 'nc|ENSG00000102854|Q13421|MSLN', 'nc|ENSG00000102854|Q13421-2|MSLN'] 1995 17019 AEIPGQPVPK True H1975_Epitope_Rep3 1034.5760452328998 1034.57494993586 71.057 2 -0.9727696277563543 0.2986773838006398 1.0 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1'] 120491 15013 VEEYVYEFRDK True H1975_Epitope_Rep1 1475.6932598131095 1475.6921699358602 62.993 2 -0.9727777655014637 0.29868681030659017 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 14293 16803 DSTVLCPLRGR True H1975_Epitope_Rep3 1215.6393908487898 1215.63828993586 70.185 2 -0.9728151622714972 0.2986962365591398 1.0 ['ENST00000560365.5_1_14:24631516-24632718:+|nuORF', 'ENST00000559284.5_1_14:24631519-24633284:+|nuORF'] 75439 8417 NIYPWNKELY True H1975_Epitope_Rep2 1338.6608374860198 1338.6597499358602 37.331 2 -0.9728380006807693 0.2987016478051665 1.0 ['nc|ENSG00000185973|Q9NVH6-7|TMLHE', 'nc|ENSG00000185973|Q9NVH6-6|TMLHE', 'nc|ENSG00000185973|Q9NVH6-5|TMLHE', 'ENSG00000185973|ENST00000334398|TMLHE', 'nc|ENSG00000185973|Q9NVH6-8|TMLHE', 'nc|ENSG00000185973|Q9NVH6-4|TMLHE', 'nc|ENSG00000185973|Q9NVH6-2|TMLHE', 'nc|ENSG00000185973|Q9NVH6-3|TMLHE'] 136595 10853 WWNLRKTCY True NCI_RA007_Epitope_Rep5 1268.61244782496 1268.61079490379 48.381 3 -0.9728512437880251 0.2987016478051665 1.0 ['nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A', 'SCN11A|p.S1201Lfs*15|1|0.18|ENSG00000168356|chr3:38871602-38871602|G/-|frameshift_variant', 'SCN11A|p.F1288Lfs*2|1|0.04|ENSG00000168356|chr3:38867408-38867408|G/-|frameshift_variant', 'nc|ENSG00000168356|Q9UI33-2|SCN11A'] 16068 16878 EDYRWWWRNFL True NCI_RA007_Epitope_Rep2 1669.7789955560895 1669.77788993586 70.384 2 -0.9728756014184639 0.2987070587602817 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4'] 12592 8630 DLAAEDLVR True H1975_Epitope_Rep1 1000.5189242795999 1000.51782993586 38.123 2 -0.9728914755726733 0.2987070587602817 1.0 ['ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-3|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 36838 8787 GVLHHLHR True PC9_epitope_Rep3 967.54641687047 967.54530993586 38.751 2 -0.9729368199906154 0.2987259092008709 1.0 ['nc|ENSG00000196715|Q8N0U8-2|VKORC1L1'] 37638 23682 GVWILYILKF True PC9_epitope_Rep5 1250.7427166351797 1250.7416099358602 96.072 2 -0.9729695641327782 0.2987259092008709 1.0 ['ST3GAL5|p.L85F|1|0.36|ENSG00000115525|chr2:85861244-85861244|T/A|missense_variant'] 111805 14683 TILLMNFRLVR True NCI_RA007_Epitope_Rep5 1374.81696128794 1374.81532490379 63.148 3 -0.9729835631960627 0.29873131921298784 1.0 ['ENST00000470347.1_1_7:105733423-105733495:-|nuORF'] 109584 7226 TDWNTRTVEK True NCI_RA007_Epitope_Rep2 1248.6098645423197 1248.6087699358602 32.726 2 -0.9729903198685931 0.29873131921298784 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 127268 21069 VLYRVALAI True PC9_epitope_Rep2 1016.6382515666397 1016.63714993586 86.498 2 -0.973052065286526 0.29873672893428305 1.0 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 84979 6054 QEETKTVL True PC9_epitope_Rep4 946.4971262058599 946.49602993586 30.281 2 -0.973054233813128 0.29873672893428305 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 141386 16687 YTEEEWERE True PC9_epitope_Rep5 1269.51496109797 1269.51331490379 69.191 3 -0.9730611073786672 0.2987395183831434 1.0 ['ENSG00000169918|ENST00000307050|OTUD7A'] 23424 7546 EVTAGQTVFNI True PC9_epitope_Rep1 1177.59790287629 1177.5962549037902 33.843 3 -0.9730961006518702 0.2987395183831434 1.0 ['ENSG00000158006|ENST00000374282|PAFAH2'] 80393 9910 PGHTWEEAP True PC9_epitope_Rep2 1022.4457593393399 1022.4446699358599 43.451 2 -0.9731015928009875 0.2987395183831434 1.0 ['ENSG00000100385|ENST00000216223|IL2RB'] 28355 4122 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 20.976 2 -0.973108774402127 0.2987395183831434 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 16524 14472 EELLRKTK True PC9_epitope_Rep3 1015.6025943339099 1015.60148993586 60.775 2 -0.973115710273908 0.2987395183831434 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 77728 12949 NTLRRYKRHYK True NCI_RA007_Epitope_Rep1 1533.8640625927299 1533.86296993586 54.359 2 -0.9731188251777527 0.2987395183831434 1.0 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000520731.1_1_5:153832004-153835585:+|nuORF'] 132883 16741 VVLSTVLTI True NCI_RA007_Epitope_Rep4 943.59538369515 943.59428993586 72.576 2 -0.9732550559600983 0.2988161307228187 1.0 ['ENSG00000125255|ENST00000245312|SLC10A2'] 43122 7457 IEYPLFPSP True H1975_Epitope_Rep1 1061.54334812229 1061.5422499358601 33.68 2 -0.97330387467555 0.29882555295761776 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|182|1|anti-sense', 'L1PA3_dup1120|chr2:110351377-110353837:-|1.2372248013512652|0.4358200479832063|1.51|529.0|122|2|anti-sense', 'L1PA3_dup1115|chr2:110017555-110020014:+|1.8409101932023448|0.4680770941019235|1.98|537.0|97|1|anti-sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|196|1|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|234|2|anti-sense', 'chr1:245814415-245816795|243|17.47|0.01|10.93|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|18', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|18'] 120447 17789 VEEQTFKEKEL True PC9_epitope_Rep6 1378.6980108403798 1378.69690993586 81.06 2 -0.9733129863714107 0.29882694400773974 1.0 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant', 'ENST00000484815.1_1_7:91670035-91672122:+|nuORF'] 81473 10603 PLGEIQLNK True NCI_RA007_Epitope_Rep3 1010.5760452329 1010.57494993586 48.757 2 -0.9733451174301236 0.29882694400773974 1.0 ['nc|ENSG00000140527|Q6P2C0-2|WDR93', 'ENSG00000140527|ENST00000268130|WDR93'] 106002 7588 SSVESAVEAI True PC9_epitope_Rep5 990.4869554449799 990.48584993586 34.136 2 -0.9733517865234567 0.29882694400773974 1.0 ['ENSG00000103154|ENST00000305202|NECAB2', 'NECAB2|p.F333Lfs*33|1|0.31|ENSG00000103154|chr16:84000756-84000756|C/-|frameshift_variant', 'nc|ENSG00000103154|Q7Z6G3-2|NECAB2'] 107797 7015 SVTKDIWK True NCI_RA007_Epitope_Rep3 975.5389314481898 975.53782993586 34.708 2 -0.9733717399667123 0.2988323502143155 1.0 ['nc|ENSG00000146453|Q8NA58|PNLDC1', 'ENSG00000146453|ENST00000392167|PNLDC1'] 137946 7197 YFFHKRDWKTQ True H1975_Epitope_Rep1 1554.7731818996594 1554.7715249037901 32.698 3 -0.9733731213084784 0.2988323502143155 1.0 ['ENSG00000172421|ENST00000305286|EFCAB3', 'nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 86308 10234 QITPNQKTL True PC9_epitope_Rep6 1041.5818588893299 1041.5807699358602 50.022 2 -0.9734294930590023 0.2988552079974202 1.0 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.R1416L|1|0.11|ENSG00000080345|chr2:151463767-151463767|G/T|missense_variant'] 129405 6826 VRERRVTPD True PC9_epitope_Rep4 1126.6207040095398 1126.6190549037901 33.473 3 -0.9736402917213984 0.2989103416770795 1.0 ['nc|ENSG00000140287|P19113-2|HDC', 'ENSG00000140287|ENST00000267845|HDC', 'ENST00000558761.5_1_15:50545740-50557820:-|nuORF', 'ENST00000558679.1_1_15:50546296-50557931:-|nuORF'] 19256 14445 ELKENDRIF True PC9_epitope_Rep2 1162.59823722946 1162.5965849037902 60.831 3 -0.9736479592451085 0.2989103416770795 1.0 ['ENSG00000121858|ENST00000241261|TNFSF10'] 40399 9633 HQVKNHMWIFV True PC9_epitope_Rep4 1437.7339599399702 1437.7323149037902 44.677 3 -0.9736666639868699 0.2989103416770795 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A'] 25192 27306 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 111.89 2 -0.9737177868001587 0.29891574520684144 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68932 4709 LTPCHGAL True PC9_epitope_Rep6 810.4058091036599 810.40470993586 25.509 2 -0.9737248219911534 0.29891574520684144 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 128510 14237 VPSQVVNV True PC9_epitope_Rep5 840.4705175352 840.46942993586 59.768 2 -0.973761816833656 0.29892516458417306 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'nc|ENSG00000197181|Q8TC59-2|PIWIL2'] 53957 4988 KTWNGGGK True NCI_RA007_Epitope_Rep2 846.4348007328198 846.43370993586 24.025 2 -0.9737917350734207 0.2989305674978504 1.0 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44'] 141201 4906 YSYNYYFWLDF True PC9_epitope_Rep3 1579.6659824361097 1579.66432490379 23.968 3 -0.9737972483164332 0.2989305674978504 1.0 ['ENST00000483012.1_1_7:148516133-148534012:-|nuORF'] 110726 9502 TGFSFKSP True PC9_epitope_Rep3 869.4283183700499 869.4272299358599 41.498 2 -0.973855126917457 0.29893597012118117 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP'] 110742 13356 TGGGGGGD True NCI_RA007_Epitope_Rep3 576.21396849936 576.2134249679301 59.799 1 -0.9739019723675517 0.29893597012118117 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 72748 1801 MNMKKSHEVQA True NCI_RA007_Epitope_Rep1 1301.62202653249 1301.62039490379 9.5189 3 -0.9739589746963496 0.29893735642220937 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 23485 7373 EVVDDEVLGP True NCI_RA007_Epitope_Rep2 1070.5131701928199 1070.5120699358602 33.304 2 -0.9739638945209456 0.29893735642220937 1.0 ['ENSG00000136206|ENST00000693451|SPDYE1', 'nc|ENSG00000205482|P0DV79|SPDYE18', 'SPDYE1|p.P95Rfs*46|1|0.5|ENSG00000136206|chr7:44002609-44002609|C/-|frameshift_variant', 'nc|ENSG00000286014|P0DUD4|SPDYE15', 'SPDYE5|p.M345*|1|0.09|ENSG00000170092|chr7:75501637-75501637|C/-|frameshift_variant', 'ENSG00000170092|ENST00000625065|SPDYE5'] 94569 21114 RRRYLRRKER True H1975_Epitope_Rep2 1487.9021794369498 1487.90053490379 87.393 3 -0.9739733197331384 0.29893735642220937 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 97235 4167 SDYSLICWHHI True NCI_RA007_Epitope_Rep2 1372.62340643148 1372.6223099358601 20.848 2 -0.9739902990740696 0.29894677449689677 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4', 'NLRP4|p.E797Nfs*16|1|0.56|ENSG00000160505|chr19:55870861-55870861|G/-|frameshift_variant'] 59761 5752 LGEDRHSCL True PC9_epitope_Rep4 1028.47092854136 1028.4698299358602 28.961 2 -0.9739920749747151 0.2989561923185427 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|2.6725304530072744|0.0003248618387484|13.01|528.0|9|2|sense'] 121501 6426 VEYRLVQS True PC9_epitope_Rep2 992.5290950404799 992.52798993586 30.127 2 -0.9740314216406398 0.2989615937453822 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 57794 9346 LEERQRFQEER True NCI_RA007_Epitope_Rep2 1518.75390300706 1518.7528099358601 40.961 2 -0.9740346943536119 0.2989615937453822 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 73408 10608 MTNLPVISNI True PC9_epitope_Rep5 1100.58998104488 1100.5888899358602 45.792 2 -0.9740797017644908 0.2989710109884205 1.0 ['MON2|p.D742N|1|0.17|ENSG00000061987|chr12:62538276-62538276|G/A|missense_variant'] 127037 16482 VLSKHLAI True PC9_epitope_Rep4 879.55418758951 879.55308993586 71.369 2 -0.9740945672249932 0.2989804279784533 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2', 'ENST00000389600.6_1_13:51590304-51594849:-|nuORF'] 108018 8834 SWSSPFTRR True PC9_epitope_Rep5 1122.55704112382 1122.55540490379 38.926 3 -0.9741157150487112 0.29898984471549084 1.0 ['ENST00000301072.10_1_12:49666135-49666204:+|nuORF'] 56548 5627 LDGMWTTP True PC9_epitope_Rep1 919.41095405375 919.40984993586 26.471 2 -0.9742013825133105 0.29901269393511987 1.0 ['ENSG00000143278|ENST00000367412|F13B'] 133579 18046 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 79.08 3 -0.9742258835004588 0.2990221099857615 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 45943 8485 ISELDRLEEK True NCI_RA007_Epitope_Rep2 1230.6455813446998 1230.64448993586 37.648 2 -0.9743447222057183 0.2990678057167419 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'FILIP1|p.N373Tfs*35|1|0.07|ENSG00000118407|chr6:75314714-75314714|T/-|frameshift_variant'] 72735 20765 MNKAHGCE True NCI_RA007_Epitope_Rep5 888.3582072882399 888.35710993586 86.847 2 -0.9743447292135464 0.2990678057167419 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 20814 5539 EQIHYILKPD True H1975_Epitope_Rep3 1254.6608374860198 1254.6597499358602 26.354 2 -0.9744646268715462 0.2991175166892772 1.0 ['ENST00000464269.5_1_20:13773870-13789559:+|nuORF', 'nc|ENSG00000101247|Q5TEU4-2|NDUFAF5', 'ENSG00000101247|ENST00000378106|NDUFAF5'] 79952 20483 PESSLALRLV True PC9_epitope_Rep5 1083.62880908175 1083.6277099358601 83.827 2 -0.9745070440421995 0.2991229130569099 1.0 ['nc|ENSG00000187908|Q9UGM3-4|DMBT1', 'nc|ENSG00000187908|Q9UGM3-8|DMBT1', 'nc|ENSG00000187908|Q9UGM3-2|DMBT1', 'nc|ENSG00000187908|Q9UGM3-5|DMBT1', 'nc|ENSG00000187908|Q9UGM3-3|DMBT1', 'nc|ENSG00000187908|Q9UGM3|DMBT1', 'nc|ENSG00000187908|Q9UGM3-7|DMBT1', 'ENSG00000187908|ENST00000338354|DMBT1'] 116857 15320 TVETWCWRWDP True H1975_Epitope_Rep2 1477.6448701520496 1477.64376993586 64.086 2 -0.9745669825979086 0.2991229130569099 1.0 ['ENST00000533108.1_1_8:145164641-145165891:+|nuORF'] 12786 14729 DLETKKFRFEE True H1975_Epitope_Rep1 1440.72489429456 1440.7237899358602 61.876 2 -0.9745817072813271 0.29913232686831787 1.0 ['ENSG00000148400|ENST00000651671|NOTCH1'] 102734 2398 SMQQLEQWIK True NCI_RA007_Epitope_Rep4 1289.64380752289 1289.64217490379 13.488 3 -0.9746212584015084 0.2991417404268465 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5'] 55389 5778 LAERDPAAP True H1975_Epitope_Rep3 938.4821448480598 938.48104993586 27.251 2 -0.9746292573655974 0.299151153732506 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 120377 5254 VEEKEKAK True NCI_RA007_Epitope_Rep5 959.5287606873098 959.52766993586 26.906 2 -0.9746648845739626 0.2991699795852584 1.0 ['ENSG00000168924|ENST00000302787|LETM1'] 122370 18129 VGDKKKRS True PC9_epitope_Rep4 916.54541381096 916.54430993586 77.798 2 -0.9746669416314545 0.2991699795852584 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2'] 126854 8382 VLQAREERPLL True NCI_RA007_Epitope_Rep1 1322.7670338900598 1322.7653849037902 36.607 3 -0.9746959761234986 0.29919282270303665 1.0 ['ENST00000269300.8_1_17:8784037-8784088:-|nuORF'] 83730 14653 PVGREIAGI True PC9_epitope_Rep3 910.5236157372198 910.52250993586 61.497 2 -0.9747383116225526 0.2992156652072309 1.0 ['ENST00000490714.1_1_21:34975667-35014025:-|nuORF', 'nc|ENSG00000205758|O95825-2|CRYZL1', 'ENSG00000205758|ENST00000381554|CRYZL1'] 59313 20070 LFHWRTRLRRK True H1975_Epitope_Rep1 1567.93241693607 1567.93130993586 83.516 2 -0.974851162341089 0.2992210582863282 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 77164 24606 NRPYLRTPRH True NCI_RA007_Epitope_Rep5 1308.71633572988 1308.7152299358602 102.12 2 -0.9748595726926154 0.2992210582863282 1.0 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF'] 31495 7073 GEAVSWRPP True NCI_RA007_Epitope_Rep1 997.4981292653699 997.49702993586 31.506 2 -0.97489354862758 0.29922380683802 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4'] 82829 18995 PRSPRIRKRF True NCI_RA007_Epitope_Rep3 1311.8000057841898 1311.79837490379 82.999 3 -0.9749083390723343 0.29922380683802 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 3475 11778 AGLESHHCL True PC9_epitope_Rep1 965.4389001370901 965.43780993586 50.175 2 -0.9749317551136621 0.29922380683802 1.0 ['ENST00000533086.5_1_19:15225833-15226058:-|nuORF'] 61044 16243 LIFRRRPRQK True H1975_Epitope_Rep1 1368.8578550134796 1368.85674993586 67.829 2 -0.9749515614831935 0.29922380683802 1.0 ['ENSG00000172375|ENST00000648610|C2CD2L', 'nc|ENSG00000172375|O14523-2|C2CD2L'] 59102 11218 LEYGRSLED True NCI_RA007_Epitope_Rep3 1080.50875351872 1080.5076499358602 51.231 2 -0.9750185903724303 0.29922380683802 1.0 ['ENST00000477632.5_1_2:70037634-70052644:+|nuORF'] 42655 15906 IEHIQVNKAP True PC9_epitope_Rep2 1147.6349570913499 1147.63386993586 66.435 2 -0.9750318421733063 0.29922380683802 1.0 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000446498.1_1_1:26781156-26781564:-|nuORF', 'ENST00000394133.2_1_10:95043842-95044274:-|nuORF'] 43096 7882 IEWDTDQWK True NCI_RA007_Epitope_Rep1 1219.5509526838698 1219.54984993586 34.652 2 -0.975097254046109 0.29926007493252044 1.0 ['ENSG00000176809|ENST00000584306|LRRC37A3', 'ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'SMURF2-LRRC37A3|2|fusion', 'SMURF2-LRRC37A3|1|fusion', 'ENST00000572638.1_1_17:44625595-44632942:+|nuORF'] 67639 12207 LSVQQHSQALQ True NCI_RA007_Epitope_Rep2 1237.6414990237702 1237.6404099358601 52.082 2 -0.9751396473296412 0.29926546616712996 1.0 ['DYTN|p.L62H|1|0.44|ENSG00000232125|chr2:206707413-206707413|A/T|missense_variant'] 133225 6375 VVSQPPDT True PC9_epitope_Rep1 841.41814760917 841.4175949679301 29.33 1 -0.9751798645847741 0.29926546616712996 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 107074 19609 SVGVETGETKK True PC9_epitope_Rep3 1133.5928174958499 1133.59172993586 80.663 2 -0.9752444220802311 0.2992883040150396 1.0 ['GABRD|p.I415Hfs*14|1|0.19|ENSG00000187730|chr1:2030158-2030159|-/G|frameshift_variant', 'ENSG00000187730|ENST00000378585|GABRD'] 127075 21360 VLSWVSFWI True PC9_epitope_Rep1 1135.60661708519 1135.6055299358602 86.993 2 -0.9752742174534162 0.29929771320379744 1.0 ['ENSG00000163285|ENST00000295452|GABRG1', 'GABRG2|p.D368Efs*24|1|0.27|ENSG00000113327|chr5:162149289-162149289|C/-|frameshift_variant', 'nc|ENSG00000113327|P18507-1|GABRG2', 'ENSG00000182256|ENST00000615808|GABRG3', 'ENSG00000113327|ENST00000639213|GABRG2', 'nc|ENSG00000113327|P18507-3|GABRG2', 'ENSG00000094755|ENST00000265294|GABRP'] 6268 13367 APRELHPPL True PC9_epitope_Rep1 1028.5767139392399 1028.57560993586 56.276 2 -0.9753053796020602 0.29930712213986466 1.0 ['ENST00000420886.6_1_12:123777925-123778129:-|nuORF'] 45665 23767 IRIILLYIFLK True H1975_Epitope_Rep2 1403.9268290067496 1403.92519490379 97.925 3 -0.9754162292838485 0.2993165308232514 1.0 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 30206 5546 FYRTYMLFKN True NCI_RA007_Epitope_Rep1 1381.6852784120495 1381.68364490379 25.643 3 -0.9754700837737129 0.2993219201074186 1.0 ['nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3', 'ENSG00000139508|ENST00000266943|SLC46A3', 'nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3'] 18296 7270 EIRRMHDFNRD True NCI_RA007_Epitope_Rep1 1487.7051789928298 1487.70352490379 32.269 3 -0.9754781655795537 0.2993219201074186 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 86121 23272 QHWLLRWGR True PC9_epitope_Rep5 1250.67849366918 1250.67685490379 94.502 3 -0.975527585042393 0.2993528811556844 1.0 ['ENST00000003912.7_2_1:24798759-24798915:+|nuORF'] 19833 12364 ELSRTGRSREV True PC9_epitope_Rep1 1288.6847608180801 1288.68310490379 52.417 3 -0.9755502457626404 0.2993528811556844 1.0 ['ENSG00000166997|ENST00000262932|CNPY4'] 10692 16315 C[Carbamidomethyl]RDIMITL True NCI_RA007_Epitope_Rep5 1020.50962282863 1020.50907496793 69.511 1 -0.9755706124845637 0.2993528811556844 1.0 ['ENST00000360171.10_2_9:70914784-70914904:+|nuORF'] 43281 12614 IFSGGLSPSL True PC9_epitope_Rep1 976.52294703088 976.52184993586 53.388 2 -0.9755741152348835 0.2993528811556844 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF', 'TBC1D17|p.R305Q|1|0.13|ENSG00000104946|chr19:49882879-49882879|G/A|missense_variant'] 124340 16444 VGTSLETF True PC9_epitope_Rep3 852.4228986364401 852.42180993586 68.389 2 -0.9755981691503346 0.2993528811556844 1.0 ['ENSG00000124574|ENST00000372530|ABCC10', 'nc|ENSG00000124574|Q5T3U5-2|ABCC10', 'ENST00000463024.1_1_6:43403548-43405752:+|nuORF'] 70391 18960 LVTGGYDYDV True PC9_epitope_Rep1 1100.50260550912 1100.5015099358602 77.713 2 -0.9756154009936292 0.2993528811556844 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 42291 18864 IDVQFKDVAV True PC9_epitope_Rep3 1132.6128246644398 1132.61172993586 77.784 2 -0.9756427318256604 0.2993528811556844 1.0 ['ENST00000521792.2_1_8:43126156-43127029:-|nuORF'] 118844 19529 VAAQRLVLDTL True PC9_epitope_Rep1 1197.7081220316097 1197.7070299358602 79.94 2 -0.9756601847284657 0.2993528811556844 1.0 ['ENST00000503044.5_1_5:176798183-176798888:+|nuORF', 'ENST00000514102.5_1_5:176797843-176799073:+|nuORF', 'nc|ENSG00000169220|O43566-6|RGS14', 'ENST00000425155.6_1_5:176795054-176799073:+|nuORF', 'nc|ENSG00000169220|O43566-5|RGS14', 'ENSG00000169220|ENST00000408923|RGS14'] 128468 4948 VPSHAPPS True NCI_RA007_Epitope_Rep5 790.39735259494 790.3962499358599 25.733 2 -0.9756634111680236 0.2993528811556844 1.0 ['USP2|p.Q214H|1|0.46|ENSG00000036672|chr11:119372839-119372839|C/A|missense_variant'] 58296 11089 LELWVNYYVRW True H1975_Epitope_Rep1 1539.7874349814701 1539.78632993586 47.617 2 -0.975715506124387 0.2993690428245402 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 122056 12702 VFYIIRETI True PC9_epitope_Rep6 1152.6542955536 1152.65263490379 60.335 3 -0.9757317590059482 0.2993690428245402 1.0 ['ENST00000521988.5_2_8:93898270-93898507:-|nuORF'] 57792 9077 LEERQRFQEER True H1975_Epitope_Rep1 1518.75390300706 1518.7528099358601 39.819 2 -0.9757330779052587 0.2993690428245402 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 32178 8946 GEVRIWDL True PC9_epitope_Rep5 986.5185303567798 986.51742993586 39.354 2 -0.97574827639064 0.2993690428245402 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1', 'ENST00000524783.1_1_11:46568623-46568797:-|nuORF'] 120333 8150 VEEDGHLKCP True H1975_Epitope_Rep3 1125.51245900017 1125.51136993586 36.327 2 -0.9757543975081605 0.2993690428245402 1.0 ['ENSG00000055483|ENST00000449938|USP36'] 85567 8086 QGEVTVASIDD True PC9_epitope_Rep1 1132.52479750568 1132.52370993586 35.927 2 -0.9757563949594272 0.2993690428245402 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 117943 9754 TWWWRWPRCLR True H1975_Epitope_Rep1 1644.8248406330397 1644.8237499358602 42.449 2 -0.9757870421693905 0.2993784484031628 1.0 ['PCDHB2|p.A658Pfs*84|1|0.14|ENSG00000112852|chr5:141096760-141096760|C/-|frameshift_variant', 'ENST00000341948.6_1_5:140595634-140595910:+|nuORF'] 46789 13577 ITGAFPPS True NCI_RA007_Epitope_Rep3 788.40685464948 788.40630496793 60.703 1 -0.9758610954594604 0.2993838347227256 1.0 ['ENST00000415522.1_1_X:22454332-22454536:+|nuORF'] 79340 4863 PARPTLLEQV True PC9_epitope_Rep5 1122.6397081186199 1122.63805490379 23.746 3 -0.9758692945335994 0.2993838347227256 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 13606 5084 DPGVPLSP True H1975_Epitope_Rep1 780.4017692690401 780.40066993586 24.627 2 -0.9760203422902428 0.29944693532365024 1.0 ['ENST00000587492.5_1_19:56826132-56826201:-|nuORF'] 65088 16035 LQLRWQEYREL True H1975_Epitope_Rep1 1532.8099613312 1532.80886993586 67.015 2 -0.9760242959309495 0.29946574312714774 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 139664 14590 YMVVYLVI True PC9_epitope_Rep3 998.5510763550197 998.54996993586 61.247 2 -0.9760707149871358 0.29946574312714774 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 20617 4247 EPTRAKDVDK True NCI_RA007_Epitope_Rep2 1157.6040508858898 1157.6029499358601 21.159 2 -0.9761010503652289 0.2994751466502007 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A', 'nc|ENSG00000011405|O00443-2|PIK3C2A'] 67788 7825 LSYVKVML True PC9_epitope_Rep4 951.5463253277499 951.54522993586 37.506 2 -0.976131888321885 0.2994805299399992 1.0 ['ENSG00000101276|ENST00000645534|SLC52A3'] 69693 10808 LVEDEAAAVAP True NCI_RA007_Epitope_Rep5 1083.54480467427 1083.54370993586 48.207 2 -0.9761406448207104 0.2994805299399992 1.0 ['ENST00000274376.10_1_5:86563790-86563910:+|nuORF'] 53100 22616 KPRRRRRHWGR True PC9_epitope_Rep6 1559.9246462170297 1559.9230049037901 100.04 3 -0.9762486345405701 0.2995181402091191 1.0 ['ENST00000344686.6_1_17:43367939-43368083:-|nuORF'] 19178 5740 ELHQNEILN True H1975_Epitope_Rep3 1108.5512870370399 1108.55018993586 27.105 2 -0.9762583470268812 0.2995181402091191 1.0 ['nc|ENSG00000172765|O94876-2|TMCC1', 'ENSG00000172765|ENST00000393238|TMCC1'] 65616 9417 LRYLTIMNRQV True NCI_RA007_Epitope_Rep3 1405.78638943565 1405.7852899358602 44.124 2 -0.9762970957343372 0.2995181402091191 1.0 ['nc|ENSG00000225997|P0C604|OR4A8'] 78898 6461 PAGGPVLPQLK True NCI_RA007_Epitope_Rep4 1075.63897984263 1075.6378899358601 31.451 2 -0.9763235035884713 0.2995181402091191 1.0 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66099749-66102792:-|nuORF'] 139595 21845 YLWRNYAF True PC9_epitope_Rep2 1131.5501648382299 1131.5490699358602 89.501 2 -0.9763597048952836 0.2995275421453882 1.0 ['ENST00000251636.9_1_5:54566241-54566439:-|nuORF'] 117406 21512 TVPQLEAPPAS True PC9_epitope_Rep4 1108.5764391557198 1108.57534993586 90.926 2 -0.9764471175053306 0.29953428444885855 1.0 ['ENST00000579008.1_1_18:8412788-8413139:+|nuORF'] 129433 19898 VRGKICWL True NCI_RA007_Epitope_Rep2 973.55314204369 973.5520499358599 82.397 2 -0.9764882998668531 0.29953428444885855 1.0 ['ENST00000458113.6_1_17:15983677-15983818:-|nuORF'] 22693 15299 ETRDLVRL True NCI_RA007_Epitope_Rep5 1000.5665431783599 1000.56544993586 65.544 2 -0.9764929979871602 0.29953428444885855 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 16618 8485 EEPSAHPV True PC9_epitope_Rep1 864.3977465177599 864.39664993586 37.473 2 -0.9765163002894298 0.29953428444885855 1.0 ['ENST00000564556.1_1_16:2048515-2049688:-|nuORF'] 117434 16548 TVQDIQALEHK True PC9_epitope_Rep1 1280.6724647988801 1280.6713699358602 68.476 2 -0.9765276501706933 0.29953428444885855 1.0 ['ENSG00000108733|ENST00000225873|PEX12'] 86504 13171 QLAAELAEYTA True H1975_Epitope_Rep1 1178.58191845898 1178.58082993586 55.758 2 -0.9766001297030021 0.2995396652843204 1.0 ['ENSG00000092820|ENST00000367075|EZR'] 14078 6597 DRSFTISV True PC9_epitope_Rep4 923.47124581119 923.47014993586 32.534 2 -0.9766006793698392 0.2995396652843204 1.0 ['ENST00000328403.10_1_6:38472323-38545453:-|nuORF', 'ENST00000314100.10_1_6:38312809-38545453:-|nuORF'] 139575 13157 YLVRGRQYWRY True H1975_Epitope_Rep3 1558.8157154179798 1558.81460993586 55.858 2 -0.9766459766659454 0.2995624865793429 1.0 ['ENSG00000008516|ENST00000336577|MMP25'] 79944 10215 PESGRLPQQQN True H1975_Epitope_Rep3 1252.61601255192 1252.6149099358602 44.338 2 -0.9766604704119809 0.29957188678485636 1.0 ['ENST00000304895.8_1_7:65425676-65425877:-|nuORF'] 120546 16018 VEFWGPPL True PC9_epitope_Rep1 943.4803539429098 943.47924993586 66.426 2 -0.9766721432267438 0.29959470703491964 1.0 ['ENST00000561346.5_1_15:57524542-57524910:+|nuORF'] 5639 5307 ANWDTRIAA True PC9_epitope_Rep2 1016.5039429217999 1016.50284993586 25.802 2 -0.9767172016566184 0.2996309467892371 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 105750 7870 SSGERWIRY True H1975_Epitope_Rep3 1152.5676058075198 1152.56650993586 35.248 2 -0.976884218987017 0.29963637339487703 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 113700 11353 TLYLQGLCWKR True NCI_RA007_Epitope_Rep2 1379.73837661407 1379.73726993586 48.751 2 -0.9769028960776683 0.29963637339487703 1.0 ['ENST00000383801.6_1_3:10360838-10360919:-|nuORF'] 56616 12970 LDIDMFHLL True NCI_RA007_Epitope_Rep2 1115.56851732431 1115.56740993586 55.075 2 -0.9769275992033716 0.29963637339487703 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2'] 136182 19922 WRRRRPGRR True NCI_RA007_Epitope_Rep5 1294.7707713445798 1294.76966993586 83.545 2 -0.976943519968534 0.29963637339487703 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 44106 19473 IINSDVKIL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 79.719 2 -0.97695269987846 0.29963637339487703 1.0 ['ENST00000272117.7_1_1:226820530-226820698:-|nuORF'] 67526 19129 LSTKFKYRYE True PC9_epitope_Rep5 1333.7030366511697 1333.70192993586 78.614 2 -0.9769583075193178 0.29963637339487703 1.0 ['ENSG00000166349|ENST00000299440|RAG1'] 26366 6554 FHTIIEFPLER True PC9_epitope_Rep4 1400.7452358163198 1400.7436049037901 32.35 3 -0.9769692286461684 0.29963637339487703 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32', 'ENST00000534357.1_1_11:128850446-128851410:-|nuORF'] 101182 6048 SLGVFVRPG True PC9_epitope_Rep2 930.5287011176598 930.52760993586 28.657 2 -0.9769906035455284 0.29963637339487703 1.0 ['ENST00000551964.5_2_12:99039219-99039444:+|nuORF'] 100157 18896 SITQVLNFWNL True PC9_epitope_Rep5 1333.7030366511697 1333.70192993586 77.703 2 -0.9770387788277295 0.29963637339487703 1.0 ['ENSG00000214842|ENST00000399080|RAD51AP2'] 122515 8624 VGEPSIHCTS True NCI_RA007_Epitope_Rep4 1028.45969515132 1028.4585899358601 39.955 2 -0.9770408134020636 0.29963637339487703 1.0 ['CR1|p.Y1114H|1|0.15|ENSG00000203710|chr1:207577957-207577957|T/C|missense_variant'] 137828 16595 YERPRRTWL True PC9_epitope_Rep4 1275.6836386192697 1275.6825499358602 71.808 2 -0.9770631736121929 0.29963637339487703 1.0 ['nc|ENSG00000152256|Q15118-2|PDK1'] 82 18196 AAALQEAMKRL True PC9_epitope_Rep5 1200.6648773206398 1200.66322490379 75.0 3 -0.9770655820748341 0.29963637339487703 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1', 'ENST00000600393.1_1_19:17881687-17885288:+|nuORF'] 14690 15376 DVILVESQDPP True PC9_epitope_Rep1 1210.60813320682 1210.60702993586 63.961 2 -0.977193265368619 0.2996591884929154 1.0 ['ENSG00000174460|ENST00000310164|ZCCHC12'] 121900 12671 VFREKVTF True NCI_RA007_Epitope_Rep1 1024.5705659296398 1024.56946993586 53.271 2 -0.9772311889563867 0.2996685853828711 1.0 ['nc|ENSG00000139973|Q17RD7-2|SYT16', 'ENSG00000139973|ENST00000683842|SYT16', 'SYT16|p.R559Vfs*33|1|0.57|ENSG00000139973|chr14:62100442-62100442|C/-|frameshift_variant', 'SYT16|p.K422N|1|0.44|ENSG00000139973|chr14:62081106-62081106|G/T|missense_variant'] 3292 15256 AGFGRRSYLV True PC9_epitope_Rep6 1124.60907669668 1124.6079699358602 70.79 2 -0.9773220672544619 0.2996873784063007 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 70232 8360 LVQRWRKK True NCI_RA007_Epitope_Rep5 1112.6930811041598 1112.6919899358602 38.829 2 -0.9773308917682866 0.2996873784063007 1.0 ['ENST00000328902.9_1_7:150325594-150329348:-|nuORF'] 5042 13865 ALKEGHSVL True PC9_epitope_Rep5 952.5341804209199 952.53308993586 58.352 2 -0.9773692508389732 0.299696774539795 1.0 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L', 'nc|ENSG00000126217|O15068-5|MCF2L', 'ENST00000464800.5_1_13:113718626-113724520:+|nuORF'] 67976 8155 LTDENSVDW True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 36.318 2 -0.9774204402233855 0.2997155660503931 1.0 ['KCTD20|p.D267N|1|0.3|ENSG00000112078|chr6:36481702-36481702|G/A|missense_variant'] 120143 6505 VEAIRKNPPK True H1975_Epitope_Rep3 1150.6822416369398 1150.68114993586 29.991 2 -0.9774330490914999 0.2997155660503931 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 81643 25531 PLLLLLFP True NCI_RA007_Epitope_Rep2 924.6048261800399 924.60372993586 107.87 2 -0.9774661519939968 0.29973837794324815 1.0 ['nc|ENSG00000177707|Q9NQS3-2|NECTIN3', 'ENSG00000177707|ENST00000485303|NECTIN3'] 28657 24957 FSMVMSLD True PC9_epitope_Rep3 928.40342614516 928.4023299358599 101.35 2 -0.9775988232405118 0.29976118922399914 1.0 ['MYO18B|p.E1680Kfs*7|1|0.29|ENSG00000133454|chr22:25903717-25903717|G/-|frameshift_variant', 'nc|ENSG00000133454|Q8IUG5-2|MYO18B', 'MYO18B|p.P2237Rfs*36|1|0.31|ENSG00000133454|chr22:26026681-26026681|C/-|frameshift_variant', 'ENSG00000133454|ENST00000335473|MYO18B', 'nc|ENSG00000133454|Q8IUG5-3|MYO18B'] 58738 8408 LERYIWDDP True NCI_RA007_Epitope_Rep5 1205.5716881284498 1205.5705899358602 39.018 2 -0.9776381987071299 0.29977595621084263 1.0 ['ENSG00000166704|ENST00000551380|ZNF606'] 59381 18105 LFLILALEERA True NCI_RA007_Epitope_Rep2 1286.7598232512998 1286.7587299358602 75.176 2 -0.9776394059125483 0.29977595621084263 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF'] 16474 12699 EELLHIKAL True PC9_epitope_Rep2 1064.62299542532 1064.62188993586 54.153 2 -0.9776572488481869 0.29977595621084263 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 55393 11023 LAERRRRPAEV True H1975_Epitope_Rep1 1351.7796642624298 1351.77856993586 47.361 2 -0.977673913956648 0.29978132839645294 1.0 ['ENST00000205402.9_1_7:107531628-107542186:+|nuORF'] 69055 6239 LTQLSFLCLDP True NCI_RA007_Epitope_Rep1 1248.64241054056 1248.64075490379 28.302 3 -0.9776827115348258 0.29978132839645294 1.0 ['ENST00000476549.6_2_6:26405834-26406223:+|nuORF'] 133150 25694 VVQVIKLA True NCI_RA007_Epitope_Rep5 868.5745886809199 868.57348993586 106.37 2 -0.9777539268249215 0.2997907220090687 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 74103 6712 NDSLVERRFH True NCI_RA007_Epitope_Rep1 1271.63708234967 1271.6359899358602 30.117 2 -0.977818299636412 0.2998135304455147 1.0 ['FAF2|p.R373L|1|0.07|ENSG00000113194|chr5:176500109-176500109|G/T|missense_variant'] 81481 8865 PLGILRFAPP True H1975_Epitope_Rep3 1079.64915060351 1079.6480499358602 39.101 2 -0.9778520790749347 0.2998229233741146 1.0 ['nc|ENSG00000172824|Q5XG92-5|CES4A', 'nc|ENSG00000172824|Q5XG92-8|CES4A', 'nc|ENSG00000172824|Q5XG92-2|CES4A', 'ENSG00000172824|ENST00000648724|CES4A'] 118785 10196 VAADGPLR True PC9_epitope_Rep1 797.43955176009 797.43844993586 44.097 2 -0.9778531578018322 0.29983231605070765 1.0 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 28240 19464 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.868 2 -0.9779036798160563 0.29986853754728626 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 20584 13858 EPSKGRGR True PC9_epitope_Rep5 885.4780625271299 885.47696993586 58.325 2 -0.9779346696230566 0.29987792936000107 1.0 ['ENSG00000197976|ENST00000313871|AKAP17A', 'ENST00000474361.6_1_X:1719073-1720484:+|nuORF'] 32057 13137 GERYWRYSEER True H1975_Epitope_Rep1 1529.7011391582098 1529.70004993586 55.624 2 -0.9779584918171237 0.29988732092074905 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 7770 11915 ASRRPRARPPS True H1975_Epitope_Rep3 1249.7115847026098 1249.71048993586 50.984 2 -0.978116598989273 0.29993293091884643 1.0 ['ENSG00000142347|ENST00000644032|MYO1F'] 43105 8741 IEWWNDLWLNE True PC9_epitope_Rep1 1516.6986795467199 1516.6970249037902 38.461 3 -0.9781221836114933 0.29993293091884643 1.0 ['ENSG00000166825|ENST00000300060|ANPEP'] 83786 23620 PVKKSLLG True PC9_epitope_Rep6 840.5432885526399 840.54218993586 104.01 2 -0.9781704422174926 0.299961101498263 1.0 ['ENST00000397909.6_1_12:78388596-78392184:+|nuORF'] 131920 14052 VTRRRMQL True PC9_epitope_Rep6 1058.6131165313 1058.6120099358602 65.921 2 -0.9781807668731989 0.299961101498263 1.0 ['ENSG00000122912|ENST00000609923|SLC25A16'] 83785 25568 PVKKSLLG True PC9_epitope_Rep2 840.5432885526399 840.54218993586 104.03 2 -0.9782001790784678 0.299961101498263 1.0 ['ENST00000397909.6_1_12:78388596-78392184:+|nuORF'] 37244 13315 GVRIQPMSER True PC9_epitope_Rep5 1171.6131761009499 1171.61152490379 56.228 3 -0.9782450697837523 0.299983904284143 1.0 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 93371 16311 RPYRFYFYMWK True NCI_RA007_Epitope_Rep2 1655.8071248802296 1655.8060299358601 68.175 2 -0.9782620832453829 0.29999329354168064 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 94199 1731 RRPMLWPLW True NCI_RA007_Epitope_Rep1 1253.6855531955698 1253.68390490379 9.1547 3 -0.9782869154733453 0.30000268254734697 1.0 ['ENST00000532433.5_1_1:212965321-212969949:+|nuORF', 'ENST00000366974.8_1_1:212965321-212970536:+|nuORF'] 109968 20040 TEHYRSHSEEK True H1975_Epitope_Rep3 1401.62730551161 1401.62620993586 83.875 2 -0.9783455450696279 0.3000442602502716 1.0 ['ENSG00000146587|ENST00000396912|RBAK'] 95534 15540 RWRRCRKCVWK True H1975_Epitope_Rep1 1575.85034418823 1575.8492499358601 65.053 2 -0.9783573201663224 0.3000442602502716 1.0 ['KCNF1|p.Q165R|1|0.18|ENSG00000162975|chr2:10912920-10912920|A/G|missense_variant'] 99779 23689 SIITYKLLTKK True NCI_RA007_Epitope_Rep4 1306.8224235078599 1306.8213299358601 102.73 2 -0.9783817018147589 0.3000442602502716 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 56807 11258 LDNHTEVVFIA True H1975_Epitope_Rep1 1256.6401020414398 1256.63900993586 48.28 2 -0.9784099805076862 0.30004962379796407 1.0 ['nc|ENSG00000115486|P38435-2|GGCX', 'ENSG00000115486|ENST00000233838|GGCX'] 58892 9100 LETANRQL True PC9_epitope_Rep2 943.50869394907 943.50758993586 40.344 2 -0.978423527971987 0.30004962379796407 1.0 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 59744 8981 LGDRPKVRLWR True NCI_RA007_Epitope_Rep2 1394.82588617886 1394.82478993586 39.544 2 -0.9784473786871579 0.30005498705792416 1.0 ['ENST00000515695.1_1_4:1976514-1977301:+|nuORF'] 123236 10613 VGLGLTYA True NCI_RA007_Epitope_Rep5 792.4381547777599 792.43760496793 47.461 1 -0.9784662273332122 0.30005498705792416 1.0 ['nc|ENSG00000006071|Q09428-2|ABCC8', 'ENSG00000006071|ENST00000389817|ABCC8'] 63870 13709 LNMERNNRYQP True PC9_epitope_Rep3 1433.68338091909 1433.6822899358601 57.812 2 -0.9785055295766033 0.300060350030175 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1'] 59242 16501 LFFEFYRL True PC9_epitope_Rep5 1133.59096702105 1133.5898699358602 68.469 2 -0.9785412123654974 0.300060350030175 1.0 ['ENST00000474887.5_1_2:25458684-25467188:-|nuORF', 'nc|ENSG00000119772|Q9Y6K1-2|DNMT3A', 'ENSG00000119772|ENST00000321117|DNMT3A'] 27225 22008 FLNWVVIFLA True PC9_epitope_Rep3 1220.69576644276 1220.69466993586 89.952 2 -0.9786347334297014 0.3001287415513357 1.0 ['ENST00000567020.6_2_16:2552545-2553103:+|nuORF'] 32199 7898 GEWRETPRKQK True NCI_RA007_Epitope_Rep1 1413.7476954278097 1413.7465899358601 34.714 2 -0.9786393675574181 0.3001287415513357 1.0 ['nc|ENSG00000181896|Q8IZC7-2|ZNF101', 'ENSG00000181896|ENST00000592502|ZNF101'] 44281 7297 ILCRWVVPFFK True NCI_RA007_Epitope_Rep4 1406.7896839109396 1406.78858993586 34.705 2 -0.9786451916345688 0.3001287415513357 1.0 ['ENST00000313640.11_1_13:43460845-43460983:-|nuORF'] 50069 18490 KKGAGGGG True PC9_epitope_Rep6 630.34492309926 630.3443749679301 83.762 1 -0.9786839158609646 0.30013812710375626 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 63502 7826 LLYDANIEAK True NCI_RA007_Epitope_Rep2 1148.607739284 1148.60664993586 35.07 2 -0.9786966313009927 0.3001434874146786 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26'] 20863 18357 EQLC[Carbamidomethyl]KM[Oxidation]RVFL True H1975_Epitope_Rep1 1338.6788137924898 1338.67770993586 76.505 2 -0.978723256843309 0.3001434874146786 1.0 ['TRIM72|p.G177C|1|0.39|ENSG00000177238|chr16:31219331-31219331|G/T|missense_variant'] 13354 7162 DLVYVDPSP True NCI_RA007_Epitope_Rep1 1003.4862271689899 1003.48512993586 31.848 2 -0.9788225253855797 0.3001582320916137 1.0 ['ENSG00000111186|ENST00000397196|WNT5B', 'ENST00000545747.1_1_12:1754224-1755415:+|nuORF'] 29418 20355 FVDRGKDSV True PC9_epitope_Rep5 1021.5192586327698 1021.51816993586 83.33 2 -0.9788302791285731 0.3001582320916137 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 66709 2541 LSLESSRQV True PC9_epitope_Rep6 1017.5454733806099 1017.54436993586 14.702 2 -0.9789419223329475 0.3001582320916137 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 100375 15902 SKTSGKAK True NCI_RA007_Epitope_Rep1 805.4657665079299 805.46466993586 65.955 2 -0.9790446878851 0.3002078444518941 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 125435 8915 VITLSKETL True PC9_epitope_Rep1 1002.59611197114 1002.59500993586 39.133 2 -0.9790581485886873 0.30021320246188504 1.0 ['ENSG00000112365|ENST00000230122|ZBTB24'] 127326 19325 VMKKMLGLR True NCI_RA007_Epitope_Rep2 1074.6405771490997 1074.63946993586 80.072 2 -0.9790854791517807 0.30021320246188504 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 105 7536 AAASGAKCVLT True H1975_Epitope_Rep3 990.5168161046199 990.51570993586 33.969 2 -0.979101536567331 0.30023599452921773 1.0 ['nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588863.1_1_18:11999160-12009987:+|nuORF'] 2239 11367 AENFFLYKDI True PC9_epitope_Rep4 1258.6233893481399 1258.6217549037901 51.496 3 -0.9791364991779961 0.3002453773850548 1.0 ['ENST00000464184.5_1_X:129473893-129492795:+|nuORF'] 18024 15020 EIELKWEK True PC9_epitope_Rep1 1073.57571087973 1073.57460993586 62.595 2 -0.979215742753136 0.30030436706399755 1.0 ['ENSG00000198746|ENST00000361720|GPATCH3'] 116648 12753 TVASEKESV True PC9_epitope_Rep2 948.47639076128 948.47528993586 54.359 2 -0.9792190190307342 0.30030436706399755 1.0 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 71896 7701 MEQEETYLELY True H1975_Epitope_Rep2 1446.6224629416197 1446.62136993586 34.576 2 -0.9793163020951166 0.3003365378169288 1.0 ['TBPL2|p.P231Qfs*8|1|0.12|ENSG00000182521|chr14:55435851-55435851|G/-|frameshift_variant', 'ENSG00000182521|ENST00000247219|TBPL2'] 67603 5245 LSVINYIHS True PC9_epitope_Rep5 1044.5603951687601 1044.55928993586 25.192 2 -0.9793192433150534 0.3003365378169288 1.0 ['ENST00000506503.1_1_4:39219821-39219944:+|nuORF'] 101686 3587 SLMFTRPEMP True NCI_RA007_Epitope_Rep2 1207.57295108175 1207.5718499358602 18.601 2 -0.9793906757558514 0.30037273409846615 1.0 ['ENST00000425595.5_1_12:54357896-54360399:-|nuORF', 'ENST00000424518.5_1_12:54357877-54360106:-|nuORF'] 79228 7998 PAPLTPPAPS True PC9_epitope_Rep1 946.5123823471799 946.51128993586 35.585 2 -0.9794473178694536 0.30037808704046337 1.0 ['ENST00000553027.1_1_12:49319137-49319416:-|nuORF'] 42501 5727 IEEKEEDLKR True H1975_Epitope_Rep3 1287.6670450652698 1287.66538490379 27.057 3 -0.9794577863473619 0.30037808704046337 1.0 ['nc|ENSG00000118985|O00472-2|ELL2', 'ENSG00000118985|ENST00000237853|ELL2'] 45771 13020 ISAPDQLMPY True H1975_Epitope_Rep1 1133.54269649929 1133.5415899358602 55.164 2 -0.979519609791372 0.3004008741469693 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12', 'nc|ENSG00000148942|Q1EHB4-2|SLC5A12'] 122276 18509 VGATIGFSLV True PC9_epitope_Rep4 962.54368247546 962.5431349679301 79.268 1 -0.9795660153190507 0.3004102536601062 1.0 ['ENSG00000144136|ENST00000272542|SLC20A1'] 25942 18353 FFTVIFQWLKV True PC9_epitope_Rep6 1426.80129414046 1426.80018993586 83.237 2 -0.9796682994317881 0.30044241855476606 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 53208 13747 KQELLVEIQR True NCI_RA007_Epitope_Rep2 1254.72958575218 1254.7284899358601 58.118 2 -0.9796684247085148 0.30044241855476606 1.0 ['ENST00000462117.5_1_19:48972629-48975663:+|nuORF', 'ENSG00000105443|ENST00000452733|CYTH2', 'nc|ENSG00000105443|Q99418|CYTH2'] 66424 14101 LSGLSWERSR True PC9_epitope_Rep5 1189.62036965637 1189.61926993586 59.251 2 -0.9796965809180762 0.30045179713370246 1.0 ['ENST00000299498.10_1_11:7694653-7694722:-|nuORF'] 75201 5945 NIDLQPGSSD True PC9_epitope_Rep3 1044.47236801 1044.4712699358602 27.925 2 -0.9797457320740305 0.30050139425139427 1.0 ['ENSG00000171840|ENST00000305108|NINJ2'] 102590 18636 SLWDSRMLQKK True NCI_RA007_Epitope_Rep2 1390.7391048900597 1390.7380099358602 77.289 2 -0.9797849678547809 0.3005107717882375 1.0 ['ENST00000291572.12_1_21:45403063-45403207:+|nuORF'] 126801 25149 VLPPHLLG True NCI_RA007_Epitope_Rep1 844.5170738048 844.51596993586 104.07 2 -0.9797981818040575 0.30053355497761214 1.0 ['nc|ENSG00000130182|Q96SZ4|ZSCAN10', 'ENSG00000130182|ENST00000576985|ZSCAN10'] 109053 17631 TAITATNPI True PC9_epitope_Rep4 900.4916469026 900.49054993586 75.838 2 -0.9798546406981452 0.3005389028902354 1.0 ['nc|ENSG00000114120|Q96CQ1-3|SLC25A36', 'ENSG00000114120|ENST00000324194|SLC25A36'] 102293 19186 SLSLVSSF True H1975_Epitope_Rep1 838.44363408102 838.4430849679301 79.952 1 -0.9798756418041255 0.3005389028902354 1.0 ['ENST00000486155.1_1_6:35928714-35992326:-|nuORF', 'SLC26A8|p.V553Tfs*23|1|0.06|ENSG00000112053|chr6:35959789-35959790|-/TTCTGTT|frameshift_variant', 'nc|ENSG00000112053|Q96RN1-4|SLC26A8', 'nc|ENSG00000112053|Q96RN1-2|SLC26A8', 'ENSG00000112053|ENST00000490799|SLC26A8'] 28352 3216 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 17.402 2 -0.9799357768636022 0.30058446607147643 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 61413 6327 LITWYPLFWI True H1975_Epitope_Rep1 1350.7376312547399 1350.73597490379 29.402 3 -0.9799372910289887 0.30058446607147643 1.0 ['ENST00000358812.8_1_6:96044648-96044717:+|nuORF'] 28738 10114 FSSGYGTDVSR True H1975_Epitope_Rep1 1174.5254662120199 1174.52436993586 43.84 2 -0.9799691187400839 0.30059918767844934 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 69376 11923 LTVVLNRLGY True PC9_epitope_Rep1 1146.67609362734 1146.6744449037901 50.727 3 -0.9799740540315479 0.30059918767844934 1.0 ['nc|ENSG00000153246|Q13018-2|PLA2R1', 'ENSG00000153246|ENST00000283243|PLA2R1'] 43165 12565 IFFFCILRL True PC9_epitope_Rep6 1170.6623581395 1170.6607049037902 59.775 3 -0.9799910966722805 0.30059918767844934 1.0 ['chr7:16776378-16777078|129|12.53|0.38|5.05|+|2|TSPAN13,None|1'] 48997 8996 KEFLHFLTDQF True H1975_Epitope_Rep1 1423.7136013348697 1423.71250993586 39.509 2 -0.9800321896256283 0.3006219672394842 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 136580 19483 WWIIKGPIVL True NCI_RA007_Epitope_Rep5 1223.7430509883498 1223.74141490379 81.827 3 -0.9800458006307539 0.3006313419031406 1.0 ['ENSG00000106128|ENST00000326139|GHRHR'] 57359 3620 LEAHIWQEEEE True NCI_RA007_Epitope_Rep2 1411.62557417611 1411.6239149037901 18.732 3 -0.9801072916771286 0.30064071631547906 1.0 ['nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'ENSG00000166025|ENST00000433060|AMOTL1'] 97008 24866 SCCCTHCC True NCI_RA007_Epitope_Rep1 858.19510733838 858.19455496793 102.93 1 -0.9801502420561308 0.3006500904765096 1.0 ['ENSG00000204323|ENST00000375215|SMIM5'] 30970 7914 GASATQAQAW True PC9_epitope_Rep1 989.4566583762097 989.45556993586 35.267 2 -0.9801860723905422 0.3006634054814716 1.0 ['ENST00000491370.1_1_2:220435199-220436548:-|nuORF'] 16704 4828 EERSLLAEQRE True H1975_Epitope_Rep3 1358.6790067312998 1358.67790993586 23.696 2 -0.9802009665939745 0.3006634054814716 1.0 ['nc|ENSG00000213085|Q9UL16-2|CFAP45', 'ENSG00000213085|ENST00000368099|CFAP45'] 31008 21903 GASLNRRPL True PC9_epitope_Rep2 982.5672118846999 982.56610993586 89.726 2 -0.9802137735482327 0.3006634054814716 1.0 ['ENSG00000107829|ENST00000331272|FBXW4', 'nc|ENSG00000107829|P57775|FBXW4'] 129920 23275 VRSVLSLS True NCI_RA007_Epitope_Rep4 859.51271670035 859.51160993586 101.07 2 -0.980236835404116 0.3006634054814716 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 121880 10851 VFPGLQGG True NCI_RA007_Epitope_Rep4 773.4071890026498 773.40608993586 48.588 2 -0.9802445312199621 0.3006634054814716 1.0 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-4|SHMT1'] 71086 20743 LYLFIVMPL True PC9_epitope_Rep4 1107.6402257125899 1107.6391299358602 87.952 2 -0.9802602991368582 0.3006634054814716 1.0 ['ENST00000503335.6_1_5:126626657-126667083:+|nuORF', 'ENST00000418761.6_1_5:126626657-126667083:+|nuORF'] 19661 10529 ELREGQGCI True NCI_RA007_Epitope_Rep2 1003.4756795686299 1003.47458993586 45.551 2 -0.9802619935833717 0.3006634054814716 1.0 ['ENST00000502856.5_1_4:15683550-15687914:+|nuORF'] 102925 8350 SPDAAGLL True H1975_Epitope_Rep2 742.3861192049001 742.3855749679301 37.071 1 -0.9802735029535926 0.3006634054814716 1.0 ['ENST00000563101.1_1_5:14664541-14664709:-|nuORF'] 136183 20286 WRRRRPGRR True NCI_RA007_Epitope_Rep5 1294.7707713445798 1294.76966993586 84.971 2 -0.9802901888330384 0.3006634054814716 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 95383 4495 RWCMRRAAWSA True H1975_Epitope_Rep3 1392.66556311032 1392.66446993586 22.409 2 -0.9803229570798382 0.3006634054814716 1.0 ['ENST00000518644.5_1_17:78389610-78398076:+|nuORF'] 29238 10098 FTVPITDVMEN True H1975_Epitope_Rep1 1264.6009396513998 1264.5998499358602 43.778 2 -0.9803448745744797 0.3006700616456714 1.0 ['LRRC4B|p.T561M|1|0.29|ENSG00000131409|chr19:50518031-50518031|G/A|missense_variant'] 122884 12459 VGHMRMYKYRF True H1975_Epitope_Rep1 1486.7325800409797 1486.73148993586 52.961 2 -0.980368700053485 0.3006700616456714 1.0 ['ENST00000272117.7_1_1:226820812-226820974:-|nuORF'] 100702 13354 SLDRAASPVL True PC9_epitope_Rep2 1027.5662088251897 1027.5651099358602 56.639 2 -0.9803717166564685 0.3006700616456714 1.0 ['ENSG00000111145|ENST00000228741|ELK3', 'ENST00000549529.1_1_12:96649292-96660955:+|nuORF'] 116109 20205 TSRYRSLKLK True NCI_RA007_Epitope_Rep2 1250.7459045226599 1250.74426490379 83.624 3 -0.9803791614110007 0.3006700616456714 1.0 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318'] 37253 7653 GVRMFRWERS True PC9_epitope_Rep4 1322.6666086561397 1322.66497490379 36.819 3 -0.980400780814257 0.3006700616456714 1.0 ['nc|ENSG00000005448|Q9H977-4|WDR54'] 84721 6191 QDREGRAVPQW True PC9_epitope_Rep6 1340.6585460702397 1340.65744993586 32.269 2 -0.9804355205778561 0.30067137477721345 1.0 ['ENST00000356742.9_1_12:111125990-111126236:-|nuORF'] 127944 9284 VPGYTANG True PC9_epitope_Rep3 777.36571811349 777.36516496793 40.652 1 -0.9804547135782647 0.30067137477721345 1.0 ['CLCA2|p.A725Sfs*9|1|0.16|ENSG00000137975|chr1:86453386-86453387|GC/-|frameshift_variant', 'ENSG00000137975|ENST00000370565|CLCA2', 'CLCA2|p.Q722L|1|0.14|ENSG00000137975|chr1:86453378-86453378|A/T|missense_variant'] 14499 8127 DTKDDLEETVP True H1975_Epitope_Rep1 1260.5721416209199 1260.5710499358602 36.199 2 -0.9804682204596518 0.30067137477721345 1.0 ['ADD2|p.S549L|1|0.46|ENSG00000075340|chr2:70674773-70674773|G/A|missense_variant'] 129004 8749 VQLKDLEKWQI True NCI_RA007_Epitope_Rep1 1398.7871006282999 1398.78544490379 38.035 3 -0.9804990301804908 0.3006941466552316 1.0 ['ENST00000494283.1_1_14:50520012-50520198:+|nuORF'] 63176 24035 LLRRRLRQWRW True NCI_RA007_Epitope_Rep1 1637.9855151380898 1637.98387490379 99.499 3 -0.9805516606886275 0.3007035175879397 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 58270 15212 LELRKNHL True PC9_epitope_Rep5 1021.6032630402501 1021.60216993586 63.521 2 -0.980610480680275 0.30075308873582934 1.0 ['ENST00000524575.5_2_11:101983367-101983394:+|nuORF'] 15930 6634 EDLRNWIEEVT True PC9_epitope_Rep3 1402.6728587217 1402.67122490379 30.54 3 -0.9806375922433282 0.30076245862757445 1.0 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 120559 10288 VEGILKRPP True H1975_Epitope_Rep1 1007.6127650947899 1007.61166993586 44.517 2 -0.9806903696288832 0.3007718282682103 1.0 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 33644 8289 GLGLFCEPAP True PC9_epitope_Rep2 1002.4844533471799 1002.48334993586 37.245 2 -0.9807824116011216 0.30079056679619454 1.0 ['ENSG00000162676|ENST00000294702|GFI1'] 37014 8341 GVPADQLRVIF True PC9_epitope_Rep6 1213.68190728377 1213.68025490379 41.733 3 -0.9807924361473312 0.30079056679619454 1.0 ['nc|ENSG00000185345|O60260-6|PRKN', 'nc|ENSG00000185345|O60260-7|PRKN', 'nc|ENSG00000185345|O60260-5|PRKN', 'nc|ENSG00000185345|O60260-8|PRKN', 'nc|ENSG00000185345|O60260-2|PRKN', 'ENSG00000185345|ENST00000366898|PRKN'] 22020 10219 ESIQCFQN True H1975_Epitope_Rep1 967.4069313024701 967.40582993586 44.25 2 -0.9808146994894337 0.30081867270510365 1.0 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 113147 15450 TLPLRYCCL True PC9_epitope_Rep4 1080.54600805792 1080.54490993586 67.36 2 -0.9808380459993324 0.30081867270510365 1.0 ['ENST00000591903.1_2_17:26976053-26976209:-|nuORF'] 83595 22428 PVCGSDGE True H1975_Epitope_Rep1 762.28541918746 762.28487496793 93.304 1 -0.9808467045341784 0.30081867270510365 1.0 ['nc|ENSG00000168843|Q8N475-3|FSTL5', 'nc|ENSG00000168843|Q8N475-2|FSTL5', 'FSTL5|p.A577Pfs*37|1|0.18|ENSG00000168843|chr4:161455116-161455116|C/-|frameshift_variant', 'ENSG00000168843|ENST00000306100|FSTL5'] 33043 7726 GILAEQFVP True H1975_Epitope_Rep3 972.5280324113198 972.52692993586 34.701 2 -0.9808558989258308 0.30082401018289007 1.0 ['ENST00000527754.1_1_11:129698120-129727360:+|nuORF', 'ENSG00000151715|ENST00000281441|TMEM45B'] 115734 9563 TSARDVWSY True PC9_epitope_Rep1 1083.49852318819 1083.49742993586 41.642 2 -0.980875218531042 0.30082401018289007 1.0 ['EPHA3|p.S805R|1|0.19|ENSG00000044524|chr3:89449293-89449293|C/G|missense_variant'] 44861 14947 INHQRIHRGER True PC9_epitope_Rep4 1414.7654111806198 1414.7637749037901 65.434 3 -0.9809187951520902 0.3008427455551536 1.0 ['ENSG00000102870|ENST00000262525|ZNF629'] 124306 6648 VGTPHQDVP True NCI_RA007_Epitope_Rep5 948.46649478392 948.46538993586 32.242 2 -0.9809637673550747 0.3008427455551536 1.0 ['ENSG00000125872|ENST00000378858|LRRN4'] 69029 3957 LTQERNRIS True NCI_RA007_Epitope_Rep4 1115.60471959223 1115.60362993586 21.456 2 -0.9809758798490508 0.3008440514469453 1.0 ['ZNF382|p.K359Sfs*186|1|0.55|ENSG00000161298|chr19:36626969-36626969|G/-|frameshift_variant'] 92395 10016 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 43.853 2 -0.9809827425890103 0.3008440514469453 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 14751 12115 DVNDHAPEL True PC9_epitope_Rep1 1008.4512386426 1008.4501499358599 51.462 2 -0.9809915458254252 0.3008440514469453 1.0 ['ENSG00000248383|ENST00000253807|PCDHAC1', 'PCDHAC1|p.D779Tfs*9|1|0.31|ENSG00000248383|chr5:140929225-140929225|C/-|frameshift_variant', 'nc|ENSG00000248383|Q9H158-2|PCDHAC1'] 80493 5937 PGLSLLLFQAC True PC9_epitope_Rep4 1160.6263665536 1160.6252699358602 29.763 2 -0.9810129169880294 0.30086681582508273 1.0 ['ENST00000477917.5_1_2:220146297-220148118:+|nuORF'] 44006 12937 IIGHSSGAI True PC9_epitope_Rep4 853.46576650793 853.46466993586 57.647 2 -0.9810735123740263 0.3009163741593205 1.0 ['RBBP9|p.W118Gfs*57|1|0.1|ENSG00000089050|chr20:18489974-18489974|G/-|frameshift_variant', 'ENST00000493184.5_1_20:18470561-18477746:-|nuORF', 'nc|ENSG00000089050|O75884-2|RBBP9', 'ENSG00000089050|ENST00000337227|RBBP9'] 85017 5624 QEGSEYWDRET True H1975_Epitope_Rep1 1398.56878757598 1398.56768993586 26.7 2 -0.9810933342321472 0.30092704230635264 1.0 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 109398 3935 TDCLKDVDLIP True NCI_RA007_Epitope_Rep2 1230.61658971554 1230.61495490379 19.943 3 -0.9810985097182785 0.30092704230635264 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'ENST00000430598.5_1_15:20613931-20667676:-|nuORF', 'ENST00000529624.5_3_15:28877823-28916776:+|nuORF', 'ENST00000428453.5_1_15:20588586-20667676:-|nuORF', 'nc|ENSG00000290376|Q9BVR0|HERC2P3', 'ENST00000424611.5_1_15:20644728-20658919:-|nuORF'] 68706 11815 LTKQCVLI True NCI_RA007_Epitope_Rep3 916.5415743004799 916.54046993586 53.593 2 -0.9810989068492483 0.30092704230635264 1.0 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 123724 14114 VGRFTEEIEWL True PC9_epitope_Rep4 1377.6928658902898 1377.69121490379 62.195 3 -0.9811274920271132 0.30092704230635264 1.0 ['ENST00000510450.1_1_3:125688183-125696014:+|nuORF', 'ENSG00000114547|ENST00000514116|ROPN1B', 'ENSG00000065371|ENST00000405845|ROPN1', 'ENST00000487124.1_1_3:123694216-123694345:-|nuORF', 'nc|ENSG00000114547|Q9BZX4-2|ROPN1B'] 59021 11930 LEVNQQSL True NCI_RA007_Epitope_Rep3 929.4818104948899 929.48070993586 54.055 2 -0.981142619833859 0.30095916836351944 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 53867 24591 KTIEITKITKV True PC9_epitope_Rep2 1272.80168806328 1272.8000549037902 100.22 3 -0.9811430189149111 0.30095916836351944 1.0 ['nc|ENSG00000107614|O14717-5|TRDMT1'] 91906 10259 RKLHYQTYREM True H1975_Epitope_Rep1 1523.7667166202298 1523.76560993586 44.403 2 -0.9812238144826028 0.3009778968519759 1.0 ['ENSG00000085840|ENST00000371568|ORC1'] 101713 6052 SLNALFDFWRY True H1975_Epitope_Rep2 1430.6982856239001 1430.69665490379 28.256 3 -0.9812685146773996 0.3009778968519759 1.0 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209', 'nc|ENSG00000146842|Q96SK2-4|TMEM209'] 104610 9097 SQRREEWKPYW True H1975_Epitope_Rep3 1563.7582601115098 1563.7566149037903 39.98 3 -0.9812848239450284 0.3009872607198832 1.0 ['ENST00000499685.2_1_12:92539993-92577930:+|nuORF'] 18868 12637 ELDRHRYERKI True NCI_RA007_Epitope_Rep1 1513.8113583135298 1513.81026993586 53.136 2 -0.9813879769192448 0.30102341531372234 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 28416 12798 FSAFRILRSR True PC9_epitope_Rep5 1251.7200241279897 1251.71836490379 54.238 3 -0.9814221310923676 0.30104617362999475 1.0 ['ENSG00000084754|ENST00000380649|HADHA', 'nc|ENSG00000084754|P40939-2|HADHA', 'HADHA|p.L175Ffs*26|1|0.07|ENSG00000084754|chr2:26232208-26232208|C/-|frameshift_variant'] 102501 11388 SLVLPSGP True H1975_Epitope_Rep1 768.43815477776 768.43760496793 48.783 1 -0.9814947611978275 0.30108232646609695 1.0 ['ENST00000247668.6_1_9:139820478-139821042:+|nuORF'] 139450 15246 YLQADFNLL True PC9_epitope_Rep6 1095.56006081559 1095.5589699358602 70.751 2 -0.98158955662877 0.30114123446206603 1.0 ['ENSG00000178235|ENST00000674365|SLITRK1', 'SLITRK1|p.N408Kfs*3|1|0.05|ENSG00000178235|chr13:83880284-83880285|-/T|frameshift_variant'] 32701 6782 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.37484993586 32.774 2 -0.9816257632586227 0.30114123446206603 1.0 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 3513 8279 AGLQEVRPAL True PC9_epitope_Rep4 1052.5978433066398 1052.59674993586 39.306 2 -0.9816378512139582 0.30114656165447773 1.0 ['ENST00000445935.5_2_21:47737957-47742843:-|nuORF', 'ENST00000397680.5_1_21:47737957-47743164:-|nuORF', 'ENST00000397682.7_1_21:47737957-47742843:-|nuORF'] 69729 5506 LVERNPDPAIS True H1975_Epitope_Rep3 1209.6353510141698 1209.63424993586 26.23 2 -0.9816488822092249 0.30114656165447773 1.0 ['nc|ENSG00000229809|P0C7X2-5|ZNF688', 'ENSG00000229809|ENST00000223459|ZNF688'] 79883 22334 PELRMLRNI True PC9_epitope_Rep4 1140.64374795324 1140.64317496793 94.145 1 -0.9817547267240881 0.3011559222598749 1.0 ['ENST00000490457.5_1_3:40567331-40615968:+|nuORF'] 112405 12970 TLCGGPGR True PC9_epitope_Rep1 759.36975794811 759.36866993586 54.761 2 -0.9817954366917652 0.3011786766675596 1.0 ['ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 36604 7411 GVHTWTSA True PC9_epitope_Rep3 857.40316625137 857.40206993586 33.513 2 -0.9818276187788094 0.3012282182129894 1.0 ['ENST00000353265.7_1_18:77918240-77960703:-|nuORF'] 13591 6659 DPFSNTWAAA True H1975_Epitope_Rep2 1078.47197408718 1078.47086993586 30.522 2 -0.9818734266365196 0.30125758367150146 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 15606 9464 EARQWFGREK True NCI_RA007_Epitope_Rep2 1305.65781779425 1305.65672993586 41.424 2 -0.9818741430460668 0.30125758367150146 1.0 ['ENSG00000204086|ENST00000373040|RPA4'] 47646 18054 IWFQNRRTKWK True H1975_Epitope_Rep1 1561.8629999635698 1561.86190993586 75.225 2 -0.9819118219580939 0.30125758367150146 1.0 ['ENSG00000229544|ENST00000451024|NKX1-2', 'ENSG00000235608|ENST00000422806|NKX1-1'] 97007 26139 SCCCTHCC True H1975_Epitope_Rep2 858.19510733838 858.19455496793 107.42 1 -0.9819280477982905 0.30125758367150146 1.0 ['ENSG00000204323|ENST00000375215|SMIM5'] 141394 16268 YTEKEPAAMD True H1975_Epitope_Rep2 1153.49614022969 1153.4950499358602 67.787 2 -0.9819652385601773 0.30125758367150146 1.0 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2'] 37192 5226 GVQTILNTRN True PC9_epitope_Rep2 1114.6094706195 1114.60836993586 25.493 2 -0.9819720849896767 0.30125758367150146 1.0 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000559483.5_1_14:24761442-24768312:-|nuORF'] 100154 12025 SITPLESEI True PC9_epitope_Rep5 987.51244191683 987.51134993586 51.248 2 -0.98199688289714 0.30126694166175605 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1', 'ENST00000433031.1_1_7:57217543-57217852:-|nuORF'] 28250 2008 FRKLLGHHG True NCI_RA007_Epitope_Rep1 1063.60393174659 1063.6028299358602 10.559 2 -0.9820345404040778 0.3012735526897272 1.0 ['GUCY2F|p.G1004Wfs*34|1|0.4|ENSG00000101890|chrX:109385229-109385230|-/A|frameshift_variant', 'GUCY2F|p.P942Qfs*17|1|0.17|ENSG00000101890|chrX:109388620-109388620|G/-|frameshift_variant', 'ENSG00000101890|ENST00000218006|GUCY2F'] 92677 11264 RNRCQYCRFQK True H1975_Epitope_Rep3 1500.7190552351597 1500.7179499358601 48.43 2 -0.9820393114675336 0.3012735526897272 1.0 ['nc|ENSG00000119508|Q92570-2|NR4A3', 'nc|ENSG00000153234|P43354-2|NR4A2', 'NR4A3|p.L587Wfs*2|1|0.26|ENSG00000119508|chr9:99863743-99863743|C/-|frameshift_variant', 'NR4A2|p.L570Sfs*20|1|0.25|ENSG00000153234|chr2:156325833-156325834|-/A|frameshift_variant', 'ENSG00000153234|ENST00000339562|NR4A2', 'ENSG00000119508|ENST00000395097|NR4A3', 'nc|ENSG00000119508|Q92570-3|NR4A3'] 60370 16786 LGTAGHHHPF True PC9_epitope_Rep5 1072.52026169228 1072.5191699358602 69.573 2 -0.9820762061415647 0.3012735526897272 1.0 ['ENST00000526600.1_1_11:12962072-12962216:+|nuORF'] 16041 5972 EDVLHLGEEVP True H1975_Epitope_Rep3 1235.60338217955 1235.6022899358602 27.982 2 -0.9820815746113039 0.3012735526897272 1.0 ['UNC5A|p.A554V|1|0.17|ENSG00000113763|chr5:176877919-176877919|C/T|missense_variant'] 13753 7007 DQEEMWGQEKK True H1975_Epitope_Rep1 1406.6136295934195 1406.61252993586 31.987 2 -0.9820816172980182 0.3012735526897272 1.0 ['nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2', 'ENSG00000174450|ENST00000567107|GOLGA6L2'] 30679 8714 GALASKPSP True PC9_epitope_Rep1 826.45486747106 826.45376993586 38.356 2 -0.9821952903228456 0.30130969279802877 1.0 ['ENST00000608477.1_1_7:128170420-128171047:-|nuORF'] 30309 24199 GAAILEKF True H1975_Epitope_Rep3 847.4803539429099 847.47924993586 100.81 2 -0.9823156180277757 0.3013417965611441 1.0 ['ENST00000473160.6_1_19:35622134-35624715:-|nuORF'] 107044 8175 SVFTGQSKI True PC9_epitope_Rep5 965.5181960036099 965.51708993586 36.387 2 -0.982388792516301 0.3013417965611441 1.0 ['ENST00000413684.1_1_2:91935968-91936997:-|nuORF'] 67713 12422 LSWREERRREE True NCI_RA007_Epitope_Rep1 1544.7807864612398 1544.77968993586 52.293 2 -0.9824218482953843 0.3013511522958876 1.0 ['ENSG00000204438|ENST00000375896|GPANK1'] 126616 13455 VLMSLAFSFLM True PC9_epitope_Rep5 1257.6501387732899 1257.6484949037902 56.77 3 -0.9824534424517667 0.3013605077800691 1.0 ['ENSG00000114395|ENST00000425346|CYB561D2'] 70538 5267 LVYHYILILNI True NCI_RA007_Epitope_Rep1 1372.8118588241598 1372.81021490379 24.569 3 -0.9824742531098004 0.3013698630136986 1.0 ['ENST00000356891.3_1_12:88442188-88442284:+|nuORF'] 77398 13365 NSFWLNEDLI True H1975_Epitope_Rep1 1249.59790287629 1249.5968099358602 56.518 2 -0.9826236066719244 0.30140599892876274 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A', 'ZNF37A|p.G124V|1|0.64|ENSG00000075407|chr10:38117522-38117522|G/T|missense_variant'] 29653 11467 FVKNKKTQDK True NCI_RA007_Epitope_Rep4 1234.70337100434 1234.7022699358602 51.04 2 -0.9826626658311634 0.3014113173187649 1.0 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 122146 16526 VGAGAYIL True PC9_epitope_Rep2 762.42759009406 762.42648993586 68.807 2 -0.9826738684036317 0.3014113173187649 1.0 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3', 'ENST00000366204.6_1_14:21488585-21489215:-|nuORF', 'ENST00000553741.5_1_14:21488585-21492212:-|nuORF', 'NDRG2|p.L311Cfs*12|1|0.12|ENSG00000165795|chr14:21018005-21018005|G/-|frameshift_variant', 'nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2'] 117825 13708 TVYAEPPK True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 57.866 1 -0.9826799822546631 0.30142067137099476 1.0 ['ENSG00000105388|ENST00000221992|CEACAM5'] 93041 25199 RPLLLVVRSRI True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 104.35 3 -0.982707786656853 0.301439378723974 1.0 ['ENST00000545387.6_1_19:49298344-49298500:-|nuORF'] 25905 13756 FFMNEQNR True PC9_epitope_Rep3 1084.4760139218 1084.47490993586 57.994 2 -0.982734545205894 0.301439378723974 1.0 ['nc|ENSG00000157625|Q8N5C8-2|TAB3', 'ENSG00000157625|ENST00000288422|TAB3'] 42176 10879 IDQKIISEHL True H1975_Epitope_Rep1 1194.66083748602 1194.6597499358602 46.805 2 -0.9828373530233531 0.30147551080523793 1.0 ['FSIP2|p.P6534Q|1|0.22|ENSG00000188738|chr2:185808907-185808907|C/A|missense_variant'] 60459 11222 LGWEALMQFVP True PC9_epitope_Rep3 1289.64783027417 1289.64619490379 48.174 3 -0.9828761761983456 0.3014848634969941 1.0 ['ALG11|p.C167F|1|0.1|ENSG00000253710|chr13:52024230-52024230|G/T|missense_variant'] 32368 11697 GFIKKFVL True NCI_RA007_Epitope_Rep4 950.5953241254999 950.59422993586 51.955 2 -0.9828937800219798 0.30150760497000856 1.0 ['ENSG00000100664|ENST00000216554|EIF5', 'ENST00000559923.1_1_14:103803111-103803587:+|nuORF', 'ENST00000561023.1_1_14:103803039-103803276:+|nuORF', 'EIF5|p.D167Vfs*63|1|0.12|ENSG00000100664|chr14:103338386-103338387|-/TATTTCAT|frameshift_variant', 'EIF5|p.D167Ffs*63|1|0.12|ENSG00000100664|chr14:103338385-103338386|-/TTCATCAT|frameshift_variant'] 67525 18006 LSTKFKYRYE True PC9_epitope_Rep4 1333.7030366511697 1333.70192993586 77.319 2 -0.9829252645819196 0.3015169569816171 1.0 ['ENSG00000166349|ENST00000299440|RAG1'] 119520 9655 VASGPISPT True PC9_epitope_Rep4 827.43888305375 827.43778993586 44.763 2 -0.9829873626287036 0.3015396974159861 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant'] 23542 13304 EVWEGLWNNT True PC9_epitope_Rep1 1246.5618517207397 1246.56074993586 56.037 2 -0.9830202828165269 0.3015624372414347 1.0 ['ENSG00000111816|ENST00000606080|FRK', 'nc|ENSG00000111816|P42685-2|FRK'] 63391 12050 LLVGLSLGVP True H1975_Epitope_Rep2 966.6113681124599 966.61026993586 51.43 2 -0.9830602236913523 0.3015851764579875 1.0 ['nc|ENSG00000164176|O43854-2|EDIL3', 'ENSG00000164176|ENST00000296591|EDIL3'] 1191 3972 AEASRWHR True H1975_Epitope_Rep2 1011.4998606008701 1011.49876993586 20.348 2 -0.9831108480856043 0.3015945269302344 1.0 ['nc|ENSG00000078795|Q9NZM6-7|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-5|PKD2L2', 'ENSG00000078795|ENST00000508883|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-3|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-6|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-2|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-4|PKD2L2'] 113856 13418 TNISQAIEML True NCI_RA007_Epitope_Rep2 1118.56416021986 1118.56306993586 56.835 2 -0.9831969661192529 0.3016130111772974 1.0 ['nc|ENSG00000069974|P51159-2|RAB27A', 'ENSG00000069974|ENST00000336787|RAB27A'] 8513 11497 ATSRASPPAL True PC9_epitope_Rep1 969.5243440132099 969.52324993586 49.102 2 -0.9832037332922791 0.3016130111772974 1.0 ['SOWAHB|p.K729Qfs*26|1|0.5|ENSG00000186212|chr4:76895666-76895667|-/C|frameshift_variant', 'ENSG00000186212|ENST00000334306|SOWAHB'] 101178 7053 SLGVAMHLC True PC9_epitope_Rep5 929.44629401665 929.44518993586 32.098 2 -0.983212764832091 0.3016130111772974 1.0 ['ENSG00000254126|ENST00000643224|CD8B2'] 133410 8722 VVVQQQTRPVP True NCI_RA007_Epitope_Rep2 1249.71427004121 1249.7131699358602 38.572 2 -0.9832388991697304 0.3016130111772974 1.0 ['ENSG00000152672|ENST00000272367|CLEC4F', 'nc|ENSG00000152672|Q8N1N0-2|CLEC4F'] 20320 8935 ENTYFLFPPLP True H1975_Epitope_Rep3 1336.6703395405598 1336.66924993586 39.367 2 -0.9832569897399533 0.3016130111772974 1.0 ['ENST00000367279.8_1_1:202128675-202129107:-|nuORF'] 130382 19077 VSLDAALP True H1975_Epitope_Rep1 784.43306939732 784.43196993586 79.514 2 -0.9832822394696346 0.3016130111772974 1.0 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF'] 35727 9877 GTGGGYRMEAW True NCI_RA007_Epitope_Rep3 1183.50804232607 1183.50640490379 45.926 3 -0.9833525381316873 0.3016130111772974 1.0 ['ENST00000416792.1_3_19:55944525-55949973:-|nuORF', 'ENSG00000187902|ENST00000376325|SHISA7'] 95737 18593 RYGRFRKF True H1975_Epitope_Rep3 1128.6304808476 1128.6288449037902 77.976 3 -0.9833746326007332 0.3016130111772974 1.0 ['ENST00000560046.1_1_14:24586548-24588423:+|nuORF', 'nc|ENSG00000100897|Q8TEB1-3|DCAF11', 'nc|ENSG00000100897|Q8TEB1-2|DCAF11', 'ENSG00000100897|ENST00000446197|DCAF11'] 47170 23814 ITWQRQRKVRP True PC9_epitope_Rep1 1466.8582489363 1466.8571499358602 96.397 2 -0.9833779504954673 0.3016130111772974 1.0 ['ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 47792 21012 IYFLRENMLL True PC9_epitope_Rep4 1310.7056795034598 1310.7045899358602 88.983 2 -0.9833839207590935 0.3016130111772974 1.0 ['ENST00000583497.1_1_18:1159162-1174680:+|nuORF'] 96813 8682 SAQTHFAA True PC9_epitope_Rep5 831.3875161872298 831.38640993586 38.337 2 -0.9834181266527267 0.3016130111772974 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 92014 15557 RKRQQRRFFKH True H1975_Epitope_Rep1 1585.9178295010897 1585.91672993586 65.12 2 -0.9834392388941708 0.3016130111772974 1.0 ['ENST00000288344.14_1_21:40717793-40720258:-|nuORF'] 57527 9523 LEDPLRLSP True H1975_Epitope_Rep1 1038.57095985246 1038.5698699358602 41.552 2 -0.9835902363083348 0.30163574545551897 1.0 ['nc|ENSG00000289604|P0CG41|CTAGE8', 'nc|ENSG00000288784|Q8IX94|CTAGE4', 'ENSG00000236761|ENST00000314099|CTAGE9', 'ENST00000451540.1_1_13:75812162-75812900:-|nuORF'] 56264 11541 LCVSDGDF True NCI_RA007_Epitope_Rep4 854.3480194440199 854.34692993586 51.338 2 -0.9836845192166229 0.30165847912511545 1.0 ['ENST00000430767.8_1_17:75212554-75212710:+|nuORF'] 91592 18884 RILDIRIQNP True H1975_Epitope_Rep2 1236.7302544585198 1236.72914993586 78.397 2 -0.9837036827402408 0.30166782673876963 1.0 ['ENST00000266682.9_1_12:85286049-85306341:-|nuORF'] 132446 2561 VVCRRDHDEPH True PC9_epitope_Rep4 1361.62586604297 1361.62423490379 14.761 3 -0.9838109393193513 0.301690559370357 1.0 ['ENST00000606070.1_1_6:108279003-108279531:+|nuORF'] 131499 3842 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 19.876 2 -0.9839134113826178 0.30169990630437693 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 66786 19816 LSLRTRRLFP True PC9_epitope_Rep2 1257.7669743204099 1257.76586993586 81.612 2 -0.98392371517413 0.30170925298818113 1.0 ['ENST00000468783.1_1_10:98416607-98460586:-|nuORF'] 56017 11415 LASLYVMMTVT True PC9_epitope_Rep1 1227.62431794827 1227.62322993586 48.785 2 -0.9840037569001273 0.3017279456051825 1.0 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5'] 22718 19456 ETSEKFKF True PC9_epitope_Rep4 1014.5022115862998 1014.50110993586 82.953 2 -0.9840294846003937 0.3017279456051825 1.0 ['ENST00000340589.4_1_4:89430402-89430654:-|nuORF'] 17055 5252 EGGPLEGAAW True NCI_RA007_Epitope_Rep2 985.4505103666099 985.44940993586 25.05 2 -0.9840588683876397 0.30174790545785485 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 27624 9620 FPAGHKAF True PC9_epitope_Rep4 873.44972252097 873.44862993586 44.628 2 -0.9840612362770994 0.30174790545785485 1.0 ['ENST00000369604.5_1_1:114301878-114302094:-|nuORF'] 71515 9173 LYYYRDRDWRW True NCI_RA007_Epitope_Rep1 1690.8004592766597 1690.7988149037901 39.681 3 -0.9840630304663028 0.30174790545785485 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 72402 16781 MKKRSRNTL True NCI_RA007_Epitope_Rep5 1132.64989596284 1132.6487899358601 71.304 2 -0.9840672553852711 0.30174790545785485 1.0 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 67169 10776 LSQWLEEMPCV True H1975_Epitope_Rep1 1333.60464513285 1333.6035499358602 46.413 2 -0.9840693250807134 0.30174790545785485 1.0 ['TAAR5|p.A226Cfs*22|1|0.18|ENSG00000135569|chr6:132589011-132589012|-/A|frameshift_variant', 'TAAR5|p.A250Lfs*21|1|0.11|ENSG00000135569|chr6:132588939-132588939|C/-|frameshift_variant', 'ENSG00000135569|ENST00000258034|TAAR5'] 118594 11949 TYRERLYRVYK True NCI_RA007_Epitope_Rep5 1545.84159581265 1545.8404899358602 52.619 2 -0.9841034079810725 0.3017572504985345 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB', 'ENST00000567372.1_1_18:65945123-65945423:-|nuORF'] 109579 17351 TDVVTVTDSL True PC9_epitope_Rep4 1048.52882025696 1048.5277299358602 74.744 2 -0.9841330074941302 0.3017799785867238 1.0 ['ENST00000581519.5_3_17:73455820-73467945:+|nuORF'] 131500 3931 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 20.222 2 -0.9841620737698774 0.3017852841198041 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 67210 21198 LSRGLPRELA True PC9_epitope_Rep5 1110.65094150866 1110.6498499358602 86.585 2 -0.9841730926205184 0.3017852841198041 1.0 ['ENSG00000126261|ENST00000246548|UBA2'] 134326 7855 VYNWPLNQP True NCI_RA007_Epitope_Rep3 1129.55564414149 1129.55398490379 38.018 3 -0.9841997561077334 0.3017946281600043 1.0 ['ENST00000462251.1_1_19:11877828-11888701:+|nuORF'] 99187 13956 SHLDPNELP True PC9_epitope_Rep3 1020.48762415132 1020.48652993586 58.758 2 -0.984244011063298 0.3018052377320112 1.0 ['SPPL2C|p.A607S|1|0.07|ENSG00000185294|chr17:45846725-45846725|G/T|missense_variant'] 96534 4199 SADRSPICLPD True H1975_Epitope_Rep3 1172.54957278488 1172.54846993586 21.269 2 -0.9842707794787884 0.3018052377320112 1.0 ['ENST00000483792.1_1_6:31695419-31697893:-|nuORF'] 117722 7344 TVVATSTPPP True NCI_RA007_Epitope_Rep3 968.51786165044 968.51676993586 36.011 2 -0.9842961543322184 0.3018052377320112 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1'] 133323 12143 VVVAKGTL True PC9_epitope_Rep2 785.50108938749 785.49998993586 52.018 2 -0.9843053571591183 0.3018052377320112 1.0 ['NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 83951 5108 PVRNQYLEK True NCI_RA007_Epitope_Rep3 1145.61930702721 1145.61820993586 27.084 2 -0.9843368853277681 0.3018279627448881 1.0 ['PXYLP1|p.N268Kfs*23|1|0.28|ENSG00000155893|chr3:141292560-141292561|-/A|frameshift_variant', 'nc|ENSG00000155893|Q8TE99-2|PXYLP1', 'ENSG00000155893|ENST00000286353|PXYLP1'] 85588 20203 QGGRRGRRL True PC9_epitope_Rep2 1054.6220414222198 1054.6209499358602 83.126 2 -0.9843902442295741 0.3018506871495671 1.0 ['ENST00000263708.6_1_2:120517682-120517859:+|nuORF'] 83908 15344 PVPTTVPV True PC9_epitope_Rep2 808.4694549060399 808.46834993586 64.3 2 -0.9844428962866763 0.30188805480845143 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 131502 4402 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 22.035 2 -0.9844701195247545 0.30188805480845143 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 113511 20675 TLTGMQPLHTF True PC9_epitope_Rep5 1244.6223438023196 1244.62124993586 84.581 2 -0.9844736707696651 0.30188805480845143 1.0 ['ENSG00000146938|ENST00000381095|NLGN4X', 'nc|ENSG00000146938|Q8N0W4-2|NLGN4X'] 107762 20803 SVSSMLLEGH True PC9_epitope_Rep5 1058.50664534374 1058.50554993586 85.068 2 -0.9844864630692942 0.30188805480845143 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 119012 16291 VAFAHGDI True PC9_epitope_Rep5 828.4130026590799 828.41190993586 67.657 2 -0.9844939945876132 0.3019241576792357 1.0 ['ENSG00000121361|ENST00000240662|KCNJ8'] 75817 20228 NLNYILYV True PC9_epitope_Rep6 1010.5436824754598 1010.54258993586 90.49 2 -0.9845775124828666 0.30195999732423573 1.0 ['ENST00000287957.3_1_7:92086815-92086875:+|nuORF'] 7308 20067 ARKLQSAARPP True H1975_Epitope_Rep2 1193.6992886834098 1193.69818993586 83.166 2 -0.9845956215274195 0.30195999732423573 1.0 ['ENST00000378204.6_1_8:119123393-119123786:-|nuORF'] 112942 18832 TLLLAAHKTV True PC9_epitope_Rep5 1065.6546299067702 1065.6535299358602 77.452 2 -0.9845978104157275 0.30195999732423573 1.0 ['nc|ENSG00000084734|Q14397|GCKR', 'ENSG00000084734|ENST00000264717|GCKR'] 80688 4940 PGVTDAAK True NCI_RA007_Epitope_Rep5 757.39701824177 757.39592993586 25.702 2 -0.9846123075583192 0.30195999732423573 1.0 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3'] 42233 5769 IDSPSLKYRIH True NCI_RA007_Epitope_Rep2 1327.7248347249101 1327.72318490379 27.056 3 -0.984618437891272 0.30195999732423573 1.0 ['IFI44|p.D302Y|1|0.04|ENSG00000137965|chr1:78659375-78659375|G/T|missense_variant'] 120591 8590 VEHFTYWRTVR True PC9_epitope_Rep3 1492.7575318355198 1492.75588490379 37.993 3 -0.9846241208061756 0.30195999732423573 1.0 ['ENST00000370803.7_1_X:133560483-133560717:+|nuORF'] 33201 10824 GIYWFRYIHV True PC9_epitope_Rep4 1352.70297708152 1352.7013349037902 49.395 3 -0.9846464530781965 0.30195999732423573 1.0 ['ENST00000529624.5_3_15:28916682-28918849:+|nuORF'] 25779 8631 FEVLAFKNR True H1975_Epitope_Rep1 1122.61857875122 1122.61748993586 38.127 2 -0.9846477733963923 0.30195999732423573 1.0 ['ENSG00000182601|ENST00000331351|HS3ST4'] 123796 22509 VGRLGGLG True NCI_RA007_Epitope_Rep3 727.4340724568299 727.4335249679301 97.844 1 -0.9846487839387151 0.30195999732423573 1.0 ['ENSG00000027001|ENST00000382172|MIPEP', 'ENST00000469167.1_1_13:24463081-24463459:-|nuORF'] 131749 10223 VTPNGSNK True PC9_epitope_Rep1 815.41373093507 815.41262993586 44.203 2 -0.9846799766418609 0.30195999732423573 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 9853 9919 AYLHLSNV True PC9_epitope_Rep4 915.4814165720701 915.48030993586 45.805 2 -0.9846818344652333 0.30195999732423573 1.0 ['ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 26568 22094 FIKCYYISE True PC9_epitope_Rep1 1164.5525329069999 1164.55087490379 89.797 3 -0.9847184828234272 0.3019652962660709 1.0 ['ENST00000290858.10_1_16:67133987-67134095:+|nuORF'] 57491 9780 LEDIRQRYEQQ True NCI_RA007_Epitope_Rep1 1476.7321049333202 1476.7310099358601 42.045 2 -0.984729522858977 0.3019652962660709 1.0 ['ENSG00000154240|ENST00000535342|CEP112'] 123570 22504 VGPRRKLNEI True PC9_epitope_Rep5 1180.70403971068 1180.70294993586 91.566 2 -0.9848439167196846 0.30202410734591767 1.0 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 13147 18625 DLRHPKRIFF True PC9_epitope_Rep4 1327.7513242562698 1327.74967490379 79.718 3 -0.9848812257898859 0.30202410734591767 1.0 ['ENSG00000274764|ENST00000436041|PRAMEF27', 'ENSG00000204505|ENST00000415919|PRAMEF9'] 97080 9222 SDFRYSWYKNH True NCI_RA007_Epitope_Rep1 1501.6738617812098 1501.67221490379 39.871 3 -0.9849939785762499 0.3020869565217391 1.0 ['SIGLEC1|p.L356F|1|0.21|ENSG00000088827|chr20:3703359-3703359|G/A|missense_variant'] 79339 4043 PARPTLLEQV True PC9_epitope_Rep2 1122.6397081186199 1122.63805490379 20.821 3 -0.9850926581009118 0.30210967077363515 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 22793 5512 ETYWYLWRFTH True NCI_RA007_Epitope_Rep2 1600.7462984454799 1600.74409987172 26.055 4 -0.9851429144956182 0.3021190068493151 1.0 ['ENSG00000198162|ENST00000356554|MAN1A2'] 62521 23378 LLIVLIPWKKI True NCI_RA007_Epitope_Rep3 1334.9053652861796 1334.9042699358602 101.5 2 -0.9851991105506639 0.30215105546191506 1.0 ['ENSG00000188211|ENST00000338965|NCR3LG1'] 14565 9744 DTTMLHKLNS True H1975_Epitope_Rep1 1158.57030822946 1158.56920993586 42.41 2 -0.9852393350982345 0.30215105546191506 1.0 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 46929 17450 ITNRYGLLP True PC9_epitope_Rep3 1045.59202965021 1045.59092993586 72.295 2 -0.9853277846120342 0.30217906015490187 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 87324 9596 QPRKEGRWAP True H1975_Epitope_Rep1 1223.65233849099 1223.65124993586 41.836 2 -0.9853323775634115 0.30217906015490187 1.0 ['ENST00000431183.6_2_2:130909932-130910058:-|nuORF'] 82248 13387 PPEPRRRI True NCI_RA007_Epitope_Rep5 1019.5988463661499 1019.59774993586 58.18 2 -0.9854053819592714 0.30217906015490187 1.0 ['ENST00000479991.1_1_X:71351446-71351593:-|nuORF'] 111944 16805 TIQDGRLYL True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 69.888 2 -0.9855266859711588 0.3022017710479146 1.0 ['nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1'] 94737 23518 RSGLVGGGLVG True PC9_epitope_Rep5 970.5559784946598 970.55488993586 95.446 2 -0.985544314822832 0.30221110501745607 1.0 ['ENST00000423485.5_1_17:38574066-38574135:-|nuORF'] 125677 1993 VKLQKKHYK True NCI_RA007_Epitope_Rep1 1170.7237125260997 1170.7220549037902 10.493 3 -0.9856508370738188 0.30231407169609414 1.0 ['ENSG00000182621|ENST00000338037|PLCB1', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'PLCB1|p.S918L|1|0.44|ENSG00000182621|chr20:8765181-8765181|C/T|missense_variant'] 19834 11171 ELSSAAGLP True PC9_epitope_Rep2 843.43379767331 843.43270993586 48.295 2 -0.985729531591992 0.30233397980338395 1.0 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 59179 18136 LFCDMYILLWL True PC9_epitope_Rep1 1428.71855268628 1428.71689490379 74.552 3 -0.9857635848385103 0.30233397980338395 1.0 ['nc|ENSG00000262628|P47884|OR1D4', 'ENSG00000262628|ENST00000575751|OR1D5'] 137035 18490 YALQRLRR True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.6399499358602 80.029 2 -0.9857881465790619 0.30233397980338395 1.0 ['ENST00000196371.9_1_5:41731180-41731306:-|nuORF'] 12552 14072 DKPKQRRPRCK True NCI_RA007_Epitope_Rep2 1410.79901980802 1410.79792993586 59.396 2 -0.9857939223638089 0.30233397980338395 1.0 ['ENSG00000124177|ENST00000373233|CHD6', 'ENST00000480022.1_1_20:40033235-40042188:-|nuORF'] 64473 19375 LPPYRYRFRRQ True NCI_RA007_Epitope_Rep1 1550.8582489363 1550.8571499358602 79.52 2 -0.9857943727697523 0.30233397980338395 1.0 ['CACNG3|p.R234Q|1|0.21|ENSG00000006116|chr16:24361616-24361616|G/A|missense_variant'] 11237 7507 DEEERRRRVFD True NCI_RA007_Epitope_Rep1 1505.73350191565 1505.73184490379 33.193 3 -0.9858479013916677 0.302352642208461 1.0 ['ENSG00000110429|ENST00000265651|FBXO3'] 131504 4666 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 23.041 2 -0.9858601515356217 0.302352642208461 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 43640 7438 IGYRLMGK True H1975_Epitope_Rep3 936.5215075622399 936.52040993586 33.588 2 -0.9858715095562544 0.3023619730365932 1.0 ['ENSG00000122729|ENST00000309951|ACO1'] 69944 10585 LVKTSQTL True PC9_epitope_Rep3 888.5280324113199 888.52692993586 45.662 2 -0.9859074274493848 0.30238591986305036 1.0 ['ENST00000490941.1_1_3:170670926-170671100:-|nuORF', 'nc|ENSG00000118263|O75840-3|KLF7', 'nc|ENSG00000118263|O75840-2|KLF7', 'nc|ENSG00000118263|O75840-4|KLF7', 'ENSG00000118263|ENST00000309446|KLF7'] 131505 4870 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 23.774 2 -0.9859110625123589 0.30238591986305036 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 9302 4689 AVQMDFNLLVD True NCI_RA007_Epitope_Rep4 1263.61692406871 1263.6158299358601 24.461 2 -0.9859133659513876 0.30238591986305036 1.0 ['nc|ENSG00000100983|P48637-2|GSS', 'ENSG00000100983|ENST00000651619|GSS'] 133235 13759 VVSVFYTVVTP True NCI_RA007_Epitope_Rep4 1209.66452588413 1209.6634299358602 60.151 2 -0.9859343827128302 0.30238591986305036 1.0 ['nc|ENSG00000221977|Q8NGC2|OR4E2', 'ENSG00000221977|ENST00000641524|OR4E2'] 138004 20685 YFSVAHFS True NCI_RA007_Epitope_Rep5 956.43921740692 956.43812993586 86.524 2 -0.9859547125370182 0.30239524962218983 1.0 ['ENST00000216024.6_1_22:38964257-38966082:-|nuORF'] 44344 11432 ILDSFPMMPI True PC9_epitope_Rep3 1162.57663947986 1162.5749849037902 48.971 3 -0.9859629407629953 0.3024139083918422 1.0 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 39652 10838 HLPLPEQI True H1975_Epitope_Rep3 945.5283667644901 945.52726993586 46.769 2 -0.9859735329319168 0.3024139083918422 1.0 ['ENSG00000149262|ENST00000534064|INTS4'] 135119 20994 WEELPARVAGR True H1975_Epitope_Rep1 1282.6782188856598 1282.6771299358602 87.199 2 -0.9860368494516631 0.3024418946749044 1.0 ['ENST00000564806.1_1_16:30036506-30036905:-|nuORF'] 69118 9941 LTRKDIHY True H1975_Epitope_Rep2 1044.5716285588 1044.5705299358601 43.227 2 -0.9860406368534397 0.3024418946749044 1.0 ['ENST00000381337.6_1_16:20747308-20748193:-|nuORF'] 135748 13918 WLWWRKTRWPW True NCI_RA007_Epitope_Rep2 1699.8888207885898 1699.88772993586 58.793 2 -0.9860647448123717 0.3024418946749044 1.0 ['EWSR1|p.G591Efs*54|1|0.11|ENSG00000182944|chr22:29299691-29299692|-/A|frameshift_variant', 'ENST00000400979.2_1_1:166244958-166245396:-|nuORF'] 131508 5158 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 24.86 2 -0.9860955841283526 0.3024645956752564 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 13262 6757 DLSWQLDGK True H1975_Epitope_Rep3 1060.5189242795998 1060.5178299358602 30.943 2 -0.9861790020845659 0.3024698787125072 1.0 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 18298 7508 EIRSYEDP True H1975_Epitope_Rep2 1007.4559896698698 1007.45488993586 33.829 2 -0.9862064408451516 0.3024698787125072 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF'] 130725 21073 VSVQLLLV True PC9_epitope_Rep6 869.5586042636099 869.55750993586 93.881 2 -0.9862403465236487 0.3024792062260972 1.0 ['ENSG00000183303|ENST00000329434|OR5P2'] 126730 26074 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 107.92 3 -0.9863219401564859 0.30251527753633844 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 42016 16648 IDGLDLLKKEH True NCI_RA007_Epitope_Rep2 1279.71360133487 1279.71250993586 69.489 2 -0.9863892065634932 0.3025379760376551 1.0 ['ENSG00000198952|ENST00000361813|SMG5', 'ENST00000473643.1_1_1:156221192-156222326:-|nuORF'] 136645 12327 WWRRRKGE True NCI_RA007_Epitope_Rep5 1172.63154347676 1172.62990490379 54.066 3 -0.9864039529627002 0.3025606739319382 1.0 ['ENST00000296754.7_2_5:96139638-96143632:-|nuORF'] 100509 9642 SLARTLDQPG True PC9_epitope_Rep3 1056.55637241748 1056.55526993586 42.036 2 -0.9864326562658752 0.30256595397595837 1.0 ['ENST00000378892.5_1_9:34635516-34635666:-|nuORF'] 63041 12642 LLQARGVP True PC9_epitope_Rep2 852.51813643396 852.51702993586 53.937 2 -0.986444999153088 0.30256595397595837 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000495096.5_1_22:19958242-19966598:-|nuORF'] 43333 14090 IFYINISIFF True H1975_Epitope_Rep1 1275.69034670915 1275.68869490379 59.364 3 -0.9868079749261173 0.30273168514086296 1.0 ['ENST00000301067.11_1_12:49414036-49414432:-|nuORF'] 4888 15924 ALETERAKAI True PC9_epitope_Rep4 1100.61897267404 1100.6178699358602 69.179 2 -0.9868323890398798 0.30273168514086296 1.0 ['MYT1L|p.M448I|1|0.11|ENSG00000186487|chr2:1922425-1922425|C/T|missense_variant'] 127327 23723 VMKKMLGLR True PC9_epitope_Rep3 1074.6405771490997 1074.63946993586 96.536 2 -0.9868892285966084 0.3027410081561706 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 44733 7807 ILWHTMKNYYR True H1975_Epitope_Rep1 1523.77073937151 1523.76910490379 34.984 3 -0.9869334469738835 0.30276370151488813 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 13121 12741 DLQTQLSHEI True H1975_Epitope_Rep2 1182.5880664685799 1182.58696993586 54.112 2 -0.9869776791541343 0.30278234594146514 1.0 ['ENSG00000102978|ENST00000219252|POLR2C'] 67646 10203 LSVRDPAGAP True PC9_epitope_Rep5 981.5243440132098 981.52324993586 44.235 2 -0.9869850424747497 0.30278234594146514 1.0 ['ENST00000380752.9_1_13:30127969-30169614:-|nuORF'] 119920 9031 VDLHVISNDVC True NCI_RA007_Epitope_Rep2 1212.58087291316 1212.5797699358602 39.728 2 -0.9870601697479118 0.3028143592486129 1.0 ['nc|ENSG00000142515|P07288-3|KLK3', 'nc|ENSG00000142515|P07288-5|KLK3', 'nc|ENSG00000142515|P07288-2|KLK3', 'ENSG00000142515|ENST00000326003|KLK3'] 25159 22625 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 91.836 2 -0.9870674420238256 0.3028143592486129 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 102315 7631 SLSQRTSQL True PC9_epitope_Rep4 1018.54072235334 1018.53962993586 36.732 2 -0.987082296990304 0.30282368041071717 1.0 ['nc|ENSG00000123329|Q9BRR9-4|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-3|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-5|ARHGAP9', 'ENSG00000123329|ENST00000393791|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9|ARHGAP9', 'ENST00000546200.5_1_12:57870467-57871594:-|nuORF'] 36963 19145 GVMGKKILAS True PC9_epitope_Rep4 1002.5895871220599 1002.58848993586 81.736 2 -0.9871260622130142 0.3028423219872189 1.0 ['ENST00000272462.2_1_2:110841508-110841715:-|nuORF'] 79169 11644 PANAPDYCI True PC9_epitope_Rep6 962.41676771018 962.41566993586 55.911 2 -0.9871365011443892 0.3028423219872189 1.0 ['ENSG00000189167|ENST00000533490|ZAR1L'] 38166 9936 HDITPIILAAH True H1975_Epitope_Rep1 1199.66625721963 1199.6646149037902 43.154 3 -0.9871779756453524 0.3028475935828877 1.0 ['nc|ENSG00000069018|Q9HCX4-2|TRPC7', 'nc|ENSG00000069018|Q9HCX4-3|TRPC7', 'ENSG00000069018|ENST00000513104|TRPC7'] 125694 19025 VKNVAKFSI True PC9_epitope_Rep5 1004.6018660579199 1004.60076993586 78.206 2 -0.9871871574911701 0.3028475935828877 1.0 ['ENST00000343776.9_1_1:227842171-227842369:+|nuORF'] 138019 4671 YFWRLYHRMEE True H1975_Epitope_Rep3 1628.7558175833599 1628.75416490379 23.09 3 -0.9872671789804709 0.30288204470110147 1.0 ['FPGS|p.L163M|1|0.12|ENSG00000136877|chr9:127807073-127807073|C/A|missense_variant'] 34956 16869 GQREEYLL True H1975_Epitope_Rep2 1006.5083595959 1006.50726993586 70.133 2 -0.9872839276321262 0.30288204470110147 1.0 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 93945 18924 RRHHRCRRQRP True NCI_RA007_Epitope_Rep2 1556.8555806810398 1556.85448993586 78.443 2 -0.9873300217003308 0.30288204470110147 1.0 ['ENSG00000163202|ENST00000368787|LCE3D'] 9803 16510 AYLEADALR True PC9_epitope_Rep1 1020.5240096600398 1020.52290993586 68.329 2 -0.9873448952756443 0.30288204470110147 1.0 ['ENSG00000180488|ENST00000370791|MIGA1', 'nc|ENSG00000180488|Q8NAN2|MIGA1'] 37398 2564 GVSTDSGTQET True PC9_epitope_Rep4 1080.45711186868 1080.45600993586 14.774 2 -0.9873562591739669 0.30288204470110147 1.0 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1', 'LUZP1|p.E483*|1|0.04|ENSG00000169641|chr1:23092808-23092815|CTGTGCTC/-|frameshift_variant'] 110472 18905 TFFDGLLVT True NCI_RA007_Epitope_Rep4 1011.5276980581499 1011.52717496793 81.745 1 -0.98736292595652 0.30288204470110147 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN', 'RELN|p.T1573Nfs*21|1|0.2|ENSG00000189056|chr7:103566630-103566631|-/T|frameshift_variant', 'RELN|p.N1689*|1|0.1|ENSG00000189056|chr7:103565423-103565424|-/TA|frameshift_variant', 'RELN|p.V1697Cfs*59|1|0.42|ENSG00000189056|chr7:103565399-103565400|-/A|frameshift_variant'] 25908 10808 FFPPEFNRP True PC9_epitope_Rep5 1149.56072952193 1149.55909490379 46.563 3 -0.9873691578344063 0.30288204470110147 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|224|1|anti-sense'] 27558 9452 FNEYRMHK True PC9_epitope_Rep4 1123.52329846739 1123.52164490379 43.967 3 -0.9873724421578777 0.30288204470110147 1.0 ['ENSG00000169083|ENST00000374690|AR', 'nc|ENSG00000169083|P10275-2|AR'] 29783 20300 FVPGSYLEKL True PC9_epitope_Rep5 1151.6226610721499 1151.6215699358602 83.135 2 -0.9873898649229641 0.302918098089802 1.0 ['nc|ENSG00000140368|O43586-2|PSTPIP1', 'ENSG00000140368|ENST00000558012|PSTPIP1', 'ENST00000560064.1_1_15:77328060-77329514:+|nuORF', 'ENST00000559785.5_1_15:77324735-77329514:+|nuORF'] 69242 11345 LTSVMSVARPS True PC9_epitope_Rep5 1146.60669373818 1146.60558993586 48.635 2 -0.9874421703914332 0.3029675177115359 1.0 ['ENST00000438150.2_1_19:53302810-53303101:-|nuORF', 'ZNF28|p.G529Afs*95|1|0.31|ENSG00000198538|chr19:52800259-52800259|C/-|frameshift_variant'] 117022 7330 TVHVITTTQK True H1975_Epitope_Rep1 1126.6346227381798 1126.63352993586 33.204 2 -0.9874781193399409 0.30297683495742606 1.0 ['ENST00000423411.2_1_6:135940529-135940997:-|nuORF'] 77 8732 AAAITGDSAEA True NCI_RA007_Epitope_Rep3 975.45090428943 975.44980993586 41.438 2 -0.9875096330560662 0.3029995187937764 1.0 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19'] 98622 18297 SFVSFNIVQ True PC9_epitope_Rep3 1039.53384606775 1039.53274993586 75.584 2 -0.9875908460759775 0.30302220202371244 1.0 ['ENST00000559350.5_1_15:60682514-60683267:-|nuORF'] 71962 5032 MESRPPPPP True H1975_Epitope_Rep1 1006.4906013567798 1006.48950993586 24.425 2 -0.987638913909314 0.30304083405734145 1.0 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 45900 15427 ISDWLYVQKMN True H1975_Epitope_Rep2 1395.6856723348699 1395.68456993586 64.496 2 -0.9876666201455444 0.30304083405734145 1.0 ['nc|ENSG00000293458|O60774|FMO6P'] 50013 24318 KKAAAAAA True PC9_epitope_Rep2 700.4231734199599 700.42262496793 99.08 1 -0.9877819209569078 0.30307688195038496 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 30204 4029 FYRRFLCFER True PC9_epitope_Rep3 1435.7183098758298 1435.7166749037901 20.614 3 -0.9879194023788518 0.3031222433104333 1.0 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 37328 12550 GVSEERIHL True PC9_epitope_Rep2 1038.5458077337798 1038.54470993586 53.582 2 -0.987925159934087 0.3031222433104333 1.0 ['nc|ENSG00000149636|Q9H410-4|DSN1', 'ENSG00000149636|ENST00000373750|DSN1'] 57909 6197 LEGEARKTKV True NCI_RA007_Epitope_Rep2 1129.64552177505 1129.6444299358602 28.713 2 -0.9880571209093517 0.30317165425894493 1.0 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A', 'SCN11A|p.S1201Lfs*15|1|0.18|ENSG00000168356|chr3:38871602-38871602|G/-|frameshift_variant', 'SCN11A|p.F1288Lfs*2|1|0.04|ENSG00000168356|chr3:38867408-38867408|G/-|frameshift_variant', 'nc|ENSG00000168356|Q9UI33-2|SCN11A', 'SCN11A|p.D986Mfs*67|1|0.18|ENSG00000168356|chr3:38885396-38885396|C/-|frameshift_variant'] 80341 15936 PGGGSHGG True H1975_Epitope_Rep1 624.26158739812 624.2610349679301 66.609 1 -0.9881448795248846 0.303180967655707 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 140999 22334 YSHSDDGC True PC9_epitope_Rep6 882.28139643618 882.28028993586 98.88 2 -0.9881933614166447 0.30321295875544624 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ATR|p.V1555Efs*36|1|0.04|ENSG00000175054|chr3:142512421-142512448|ATGGTATGCTGATCGTCATGCTTTAGAA/-|frameshift_variant'] 132667 6673 VVGGDGRF True H1975_Epitope_Rep3 805.40825163181 805.40714993586 30.622 2 -0.9881980653537528 0.30321295875544624 1.0 ['ENSG00000079739|ENST00000371084|PGM1'] 135532 23437 WKLCLKKKK True PC9_epitope_Rep6 1173.74200544253 1173.7403549037901 103.26 3 -0.9882786131285664 0.3032222712267618 1.0 ['nc|ENSG00000134744|Q5TAX3-2|TUT4'] 18163 17198 EIKKSRRHP True H1975_Epitope_Rep2 1149.6730739355698 1149.67196993586 71.441 2 -0.9883214963678728 0.3032449481449802 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'KDM4B-AKAP8L|1|fusion'] 141188 18681 YSVISYLKKL True PC9_epitope_Rep5 1212.71181042972 1212.7107099358602 76.877 2 -0.9883529982379348 0.3032676244570665 1.0 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000493637.6_1_X:134704384-134704540:+|nuORF', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF', 'ENSG00000165359|ENST00000639893|INTS6L'] 63547 14411 LMDDLLNKTRY True H1975_Epitope_Rep1 1380.70713605544 1380.7060299358602 60.629 2 -0.9883992223257774 0.30327288278295267 1.0 ['ENSG00000117971|ENST00000261751|CHRNB4', 'CHRNB4|p.S218Kfs*224|1|0.08|ENSG00000117971|chr15:78629652-78629653|-/T|frameshift_variant', 'nc|ENSG00000117971|P30926-2|CHRNB4'] 97810 17945 SELGDFRFTL True PC9_epitope_Rep3 1183.5873381925899 1183.58624993586 74.229 2 -0.988408266747856 0.30327288278295267 1.0 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 57114 21289 LDTAGEKFF True PC9_epitope_Rep5 1026.5022115862998 1026.50110993586 86.942 2 -0.9884475762545575 0.3033222857753782 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 55482 20456 LAGEWAVGTKF True PC9_epitope_Rep2 1177.6131590176099 1177.61206993586 84.113 2 -0.9884767584497729 0.3033234889283853 1.0 ['ENST00000591360.1_1_18:56203804-56204053:+|nuORF'] 75474 18583 NKIYVFFQHAF True PC9_epitope_Rep4 1412.72410644892 1412.72245490379 79.555 3 -0.9884999477928138 0.3033234889283853 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 86285 12047 QISAHFMGWP True H1975_Epitope_Rep2 1172.5436995587997 1172.5426099358601 51.418 2 -0.9885028539747349 0.3033234889283853 1.0 ['nc|ENSG00000148053|Q16620-7|NTRK2', 'nc|ENSG00000148053|Q16620-2|NTRK2', 'nc|ENSG00000148053|Q16620-3|NTRK2', 'nc|ENSG00000148053|Q16620-5|NTRK2', 'nc|ENSG00000148053|Q16620-6|NTRK2', 'nc|ENSG00000148053|Q16620|NTRK2', 'ENSG00000148053|ENST00000277120|NTRK2'] 128849 11810 VQDGIPVVTV True PC9_epitope_Rep4 1025.5757108797297 1025.57460993586 53.194 2 -0.9885167459294933 0.3033287453396229 1.0 ['ADAM21|p.C496Vfs*50|1|0.25|ENSG00000139985|chr14:70458981-70458981|C/-|frameshift_variant'] 117859 13695 TVYQNNVL True PC9_epitope_Rep1 949.4868958753299 949.48578993586 57.53 2 -0.9885774125524351 0.3033287453396229 1.0 ['nc|ENSG00000056998|O15488-6|GYG2', 'ENST00000381161.5_1_X:2748138-2799251:+|nuORF', 'nc|ENSG00000056998|O15488-5|GYG2', 'nc|ENSG00000056998|O15488-4|GYG2', 'nc|ENSG00000056998|O15488-3|GYG2', 'ENSG00000056998|ENST00000398806|GYG2', 'nc|ENSG00000056998|O15488|GYG2'] 119720 6361 VAVVAHGP True NCI_RA007_Epitope_Rep5 748.4231734199599 748.42206993586 31.142 2 -0.9887410097800319 0.3033647807146484 1.0 ['ENSG00000130147|ENST00000392011|SH3BP4', 'nc|ENSG00000130147|Q9P0V3-2|SH3BP4'] 30974 5797 GASCWSGFHII True NCI_RA007_Epitope_Rep4 1176.53861417836 1176.53750993586 28.921 2 -0.9887681983797717 0.30337003581164146 1.0 ['ENSG00000148331|ENST00000277458|ASB6'] 117944 9727 TWWWRWPRCLR True H1975_Epitope_Rep3 1644.8248406330397 1644.8237499358602 42.435 2 -0.9887857585889492 0.30337003581164146 1.0 ['PCDHB2|p.A658Pfs*84|1|0.14|ENSG00000112852|chr5:141096760-141096760|C/-|frameshift_variant', 'ENST00000341948.6_1_5:140595634-140595910:+|nuORF'] 127328 23793 VMKKMLGLR True PC9_epitope_Rep5 1074.6405771490997 1074.63946993586 96.5 2 -0.988827743596057 0.30337934444192044 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 77918 18789 NVINVHPGVV True PC9_epitope_Rep4 1046.58727862294 1046.5861899358601 80.357 2 -0.9888666350969604 0.30338865282343197 1.0 ['ENST00000366628.9_1_1:233115559-233115757:+|nuORF'] 29710 21672 FVLYAPFSL True H1975_Epitope_Rep1 1055.56916894731 1055.5680699358602 90.052 2 -0.9889117303601462 0.30342468499044617 1.0 ['ENST00000377815.4_1_13:73302085-73309106:+|nuORF', 'ENST00000464754.1_1_13:73302073-73317683:+|nuORF'] 37230 13080 GVRGAQPH True PC9_epitope_Rep3 820.4303840587199 820.42928993586 55.337 2 -0.9889385403308022 0.30342993813551394 1.0 ['ENSG00000063438|ENST00000684583|AHRR', 'nc|ENSG00000063438|A9YTQ3|AHRR', 'nc|ENSG00000063438|A9YTQ3-3|AHRR', 'nc|ENSG00000063438|A9YTQ3-2|AHRR'] 9563 6171 AWFWNERFWLP True PC9_epitope_Rep6 1550.7459045226599 1550.7442649037903 32.178 3 -0.9889706793213704 0.30342993813551394 1.0 ['CERS6|p.A254Cfs*8|1|0.45|ENSG00000172292|chr2:168717891-168717892|-/T|frameshift_variant', 'ENSG00000172292|ENST00000305747|CERS6', 'nc|ENSG00000172292|Q6ZMG9-2|CERS6'] 136420 23446 WVALRRRH True PC9_epitope_Rep6 1092.64171423764 1092.6411749679298 103.29 1 -0.9890227356504022 0.30343758767652207 1.0 ['ENSG00000135722|ENST00000258200|FBXL8'] 139693 19524 YNILRGIGKL True PC9_epitope_Rep1 1145.6920780446499 1145.69044490379 79.919 3 -0.9890498288427553 0.30343758767652207 1.0 ['ENST00000525494.1_1_11:70016194-70034107:+|nuORF', 'nc|ENSG00000131620|Q5XXA6-2|ANO1', 'nc|ENSG00000131620|Q5XXA6-4|ANO1', 'ENSG00000131620|ENST00000355303|ANO1', 'nc|ENSG00000131620|Q5XXA6-5|ANO1'] 66948 12701 LSPDDSIDE True H1975_Epitope_Rep2 989.41893545481 989.41782993586 53.955 2 -0.9890633350073047 0.30343758767652207 1.0 ['nc|ENSG00000102385|Q13474-2|DRP2', 'ENSG00000102385|ENST00000395209|DRP2'] 141728 5341 YTWRWVWSWEW True H1975_Epitope_Rep1 1683.7622828627896 1683.76063490379 25.607 3 -0.9890664741861628 0.30343758767652207 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 1602 4519 AEFAKLNECP True H1975_Epitope_Rep2 1120.52229540788 1120.52118993586 22.495 2 -0.9890718413739915 0.30343758767652207 1.0 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B', 'POLR3B|p.G467Vfs*33|1|0.27|ENSG00000013503|chr12:106430408-106430408|G/-|frameshift_variant'] 49361 4928 KESQKPFE True H1975_Epitope_Rep2 991.4974605590298 991.49636993586 24.038 2 -0.989077387628961 0.30343758767652207 1.0 ['ENSG00000160194|ENST00000354250|NDUFV3'] 24645 18316 FAKLDQKDL True PC9_epitope_Rep3 1076.5866099166 1076.58550993586 75.661 2 -0.9890847739889935 0.30343758767652207 1.0 ['ENSG00000132604|ENST00000254942|TERF2'] 55557 11573 LAGSGRLR True NCI_RA007_Epitope_Rep3 828.49298431528 828.49188993586 52.653 2 -0.9890882170979455 0.30343758767652207 1.0 ['ENST00000374825.8_1_6:32939382-32940003:+|nuORF'] 95487 11454 RWNSRPLS True PC9_epitope_Rep6 1014.5359117564199 1014.53480993586 55.118 2 -0.9891345026254817 0.3034440377267748 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 122706 21649 VGGGQGQP True PC9_epitope_Rep4 698.33475233838 698.3342049679301 91.464 1 -0.989135719694363 0.3034440377267748 1.0 ['nc|ENSG00000132677|Q9H310-3|RHBG'] 19884 5468 ELTKNIPM[Oxidation]EK True NCI_RA007_Epitope_Rep2 1217.6325745132897 1217.6314699358602 25.888 2 -0.9891822439041356 0.3034440377267748 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 32970 8469 GIEAPEEHG True PC9_epitope_Rep4 937.4141248578899 937.41302993586 40.045 2 -0.9892167101868591 0.3034440377267748 1.0 ['ENST00000570164.5_1_16:31501628-31501862:-|nuORF'] 54113 9614 KVLRKLLKKGP True NCI_RA007_Epitope_Rep5 1278.8863611770998 1278.8847149037902 43.623 3 -0.9892275515562685 0.3034440377267748 1.0 ['GPR75-ASB3|p.R34Pfs*7|1|0.43|ENSG00000115239|chr2:53765477-53765478|-/T|frameshift_variant'] 27730 24241 FPRKLVQR True PC9_epitope_Rep2 1042.6399829021398 1042.63888993586 98.783 2 -0.9892826540701295 0.3034772038098291 1.0 ['ENST00000555858.1_1_14:64902319-64905932:+|nuORF'] 116980 12513 TVGPQPTPSIP True PC9_epitope_Rep1 1092.58152453616 1092.5804299358601 52.999 2 -0.9893113117168982 0.3034772038098291 1.0 ['ENSG00000224940|ENST00000446477|PRRT4', 'nc|ENSG00000224940|C9JH25-3|PRRT4', 'nc|ENSG00000224940|C9JH25-2|PRRT4'] 67802 8849 LTAAHCFKRY True H1975_Epitope_Rep3 1208.6124478249599 1208.61134993586 39.043 2 -0.9893128783119388 0.3034772038098291 1.0 ['ENSG00000164099|ENST00000296498|PRSS12', 'PRSS12|p.K816Tfs*18|1|0.1|ENSG00000164099|chr4:118282117-118282118|-/TGTG|frameshift_variant'] 645 9100 AATAAERAAL True PC9_epitope_Rep6 943.5086939490699 943.50758993586 45.088 2 -0.9893532873533998 0.3034772038098291 1.0 ['ENST00000378295.8_1_1:3569180-3598955:+|nuORF'] 100997 5850 SLFSVRNPAR True PC9_epitope_Rep1 1145.63054041725 1145.62888490379 27.316 3 -0.9893600428728673 0.3034772038098291 1.0 ['ENST00000306156.7_1_2:45878956-45879109:+|nuORF'] 25161 23614 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 95.622 2 -0.9893961492021108 0.30348245414835495 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 113349 9915 TLRRQAKA True H1975_Epitope_Rep1 942.5722972651398 942.57120993586 43.074 2 -0.989407932883302 0.30348245414835495 1.0 ['ENST00000490936.5_1_X:153583356-153583392:-|nuORF'] 129430 16574 VRGGVGGGLIG True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 70.511 2 -0.9895760365539693 0.30351441967326986 1.0 ['ENST00000566392.5_1_16:67336668-67360655:-|nuORF'] 83207 18518 PSTVKDCPTL True NCI_RA007_Epitope_Rep5 1059.52704643515 1059.5259499358601 78.057 2 -0.9895778802727367 0.30351441967326986 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4'] 7397 7799 ASAGPVPDLVL True NCI_RA007_Epitope_Rep2 1037.5757108797297 1037.57460993586 34.964 2 -0.9895823863005132 0.30352372301773883 1.0 ['ENST00000464499.5_1_16:70512876-70513152:+|nuORF'] 123962 5545 VGRYSVPEGP True PC9_epitope_Rep1 1059.5349086969097 1059.53380993586 26.159 2 -0.9896807321464834 0.3035463834902825 1.0 ['ENSG00000113211|ENST00000231136|PCDHB6'] 13679 17831 DPRRRNKSI True NCI_RA007_Epitope_Rep3 1140.64758746372 1140.64707496793 78.181 1 -0.9896909361496381 0.30355163155996634 1.0 ['ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 49430 21688 KEWRNRRKKRR True PC9_epitope_Rep6 1611.9658423226695 1611.9641849037898 96.31 3 -0.9896933393643728 0.30355163155996634 1.0 ['nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant'] 82998 20622 PSGKRQCKT True PC9_epitope_Rep4 1003.5232984673898 1003.52220993586 87.478 2 -0.9897740750459575 0.3035876475930972 1.0 ['nc|ENSG00000291031|Q8N888|BCORP1', 'ENST00000441139.5_1_Y:21628916-21635881:-|nuORF'] 133199 10568 VVSASEYQILQ True H1975_Epitope_Rep2 1235.63976768827 1235.6386699358602 45.671 2 -0.9898010377074056 0.30359289435020703 1.0 ['ENST00000478946.1_1_2:74071889-74072120:+|nuORF'] 15919 8401 EDLLEWLRP True H1975_Epitope_Rep1 1169.60807363717 1169.6069699358602 37.242 2 -0.9898103806883213 0.30359289435020703 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 734 12922 AAVKNIKL True H1975_Epitope_Rep3 855.55418758951 855.55308993586 54.932 2 -0.9898955667390816 0.3036289083890959 1.0 ['nc|ENSG00000047346|Q32MH5-2|ATOSA', 'ENSG00000047346|ENST00000619572|ATOSA', 'nc|ENSG00000047346|Q32MH5-3|ATOSA'] 24534 8225 FAGAVKAN True NCI_RA007_Epitope_Rep5 776.41808803952 776.41698993586 38.316 2 -0.9900476238712292 0.3036382092103857 1.0 ['ENSG00000180071|ENST00000399703|ANKRD18A', 'nc|ENSG00000180071|Q8IVF6-2|ANKRD18A'] 66960 13152 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 58.485 2 -0.9901125527131484 0.30368757763145593 1.0 ['ENSG00000198734|ENST00000367797|F5'] 30227 17317 FYTMFTRLLNP True H1975_Epitope_Rep1 1401.7114931598899 1401.7103899358601 72.072 2 -0.9901208285264523 0.30369282136894826 1.0 ['OR2T8|p.P281R|1|0.37|ENSG00000177462|chr1:247921859-247921859|C/G|missense_variant'] 124154 8092 VGSSMKTE True NCI_RA007_Epitope_Rep5 837.39021860917 837.38912993586 37.815 2 -0.9901278670714182 0.30369282136894826 1.0 ['ENST00000441598.1_1_2:60597053-60605688:-|nuORF'] 30891 10537 GAPSPLNSL True PC9_epitope_Rep1 854.44978209062 854.44868993586 45.422 2 -0.9902171396513834 0.3037154762540734 1.0 ['ENSG00000122145|ENST00000373296|TBX22', 'nc|ENSG00000122145|Q9Y458-2|TBX22'] 27620 8030 FNWKIWPRWRT True NCI_RA007_Epitope_Rep5 1588.8415362429996 1588.83988490379 37.578 3 -0.9902594053669949 0.3037648410059164 1.0 ['ENST00000540171.2_1_14:105147650-105150445:+|nuORF'] 28245 20091 FRKKKREQ True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.6661699358601 84.222 2 -0.990416673350673 0.303842096125853 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 128185 2745 VPLTWRCDR True H1975_Epitope_Rep2 1144.5811476966799 1144.5795149037901 14.597 3 -0.9904172278600228 0.303842096125853 1.0 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'CD320|p.A240Qfs*29|1|0.16|ENSG00000167775|chr19:8302594-8302594|C/-|frameshift_variant', 'ENSG00000167775|ENST00000301458|CD320', 'ENST00000596002.5_1_19:8368843-8370161:-|nuORF'] 132166 4200 VTVPPDVFF True NCI_RA007_Epitope_Rep5 1019.53278343859 1019.53168993586 22.687 2 -0.9904198715455215 0.303842096125853 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 75865 6404 NLQFHRFWSV True H1975_Epitope_Rep1 1332.6727395824 1332.6716499358602 29.692 2 -0.9904321430279569 0.303842096125853 1.0 ['nc|ENSG00000158104|P32754-2|HPD', 'nc|ENSG00000158104|P32754|HPD', 'ENSG00000158104|ENST00000289004|HPD'] 45875 5627 ISDRYGAP True PC9_epitope_Rep3 877.4293809992099 877.42828993586 26.722 2 -0.9904617646042688 0.30384327760269214 1.0 ['ENSG00000170788|ENST00000372202|DYDC1', 'nc|ENSG00000170788|Q8WWB3-2|DYDC1'] 130296 6158 VSHGRESK True PC9_epitope_Rep6 898.4620781098199 898.46098993586 32.123 2 -0.9904640355088977 0.30384327760269214 1.0 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 91271 14726 RGKGNGTL True H1975_Epitope_Rep1 801.4456997696899 801.4451549679301 61.864 1 -0.9904836441004808 0.30384327760269214 1.0 ['nc|ENSG00000134198|O60636-2|TSPAN2', 'ENSG00000134198|ENST00000369516|TSPAN2'] 59446 16890 LFPGHCIL True H1975_Epitope_Rep2 898.47349474066 898.47238993586 70.212 2 -0.9905796642976145 0.3038456402723995 1.0 ['ENST00000468376.2_1_20:45867286-45947776:-|nuORF'] 4230 6285 AIDILDRSSSM True NCI_RA007_Epitope_Rep2 1206.59143759686 1206.5897849037901 29.054 3 -0.9905887217296316 0.3038456402723995 1.0 ['MAP3K3|p.L439*|1|0.16|ENSG00000198909|chr17:63691202-63691202|C/-|frameshift_variant', 'MAP3K3|p.Y479Tfs*6|1|0.38|ENSG00000198909|chr17:63691821-63691821|C/-|frameshift_variant', 'MAP3K3|p.A510Pfs*25|1|0.22|ENSG00000198909|chr17:63692292-63692292|G/-|frameshift_variant', 'ENSG00000198909|ENST00000361733|MAP3K3', 'nc|ENSG00000198909|Q99759-2|MAP3K3'] 22613 4450 ETLREHKFMGF True NCI_RA007_Epitope_Rep2 1393.68125566077 1393.68014993586 21.943 2 -0.9905937182986092 0.3038456402723995 1.0 ['ENST00000311936.7_1_12:25362125-25362311:-|nuORF'] 37636 23540 GVWILYILKF True PC9_epitope_Rep1 1250.7427166351797 1250.7416099358602 95.338 2 -0.990600574194156 0.3038456402723995 1.0 ['ST3GAL5|p.L85F|1|0.36|ENSG00000115525|chr2:85861244-85861244|T/A|missense_variant'] 112957 16292 TLLLWFIWFSN True PC9_epitope_Rep2 1438.76490863174 1438.76380993586 67.913 2 -0.9906067485969587 0.3038456402723995 1.0 ['ENSG00000166111|ENST00000610966|SVOP'] 126976 19565 VLRQFRFDP True PC9_epitope_Rep1 1176.64037682496 1176.63926993586 80.082 2 -0.9906593582094753 0.3038456402723995 1.0 ['nc|ENSG00000237541|P01909|HLA-DQA1'] 5298 20356 ALQHRPRLPRL True H1975_Epitope_Rep3 1355.8262205320298 1355.82457490379 85.115 3 -0.9906977500838567 0.3038642311595364 1.0 ['ENST00000323927.2_1_9:140077681-140079444:-|nuORF'] 32390 15600 GFPADLFP True H1975_Epitope_Rep2 862.42250471362 862.4219549679301 65.161 1 -0.9907077920502858 0.3038642311595364 1.0 ['PCDHGA3|p.L732Ffs*55|1|0.3|ENSG00000254245|chr5:141346226-141346227|-/T|frameshift_variant'] 67765 16523 LSYRFKQGFRR True NCI_RA007_Epitope_Rep1 1456.8051507342796 1456.8040499358601 68.386 2 -0.9907582495601709 0.30387352623075586 1.0 ['ENSG00000278195|ENST00000610913|SSTR3'] 126087 11804 VLELQTEL True PC9_epitope_Rep1 943.52261267771 943.52150993586 50.272 2 -0.9907900673591095 0.30392287766710285 1.0 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 126188 3151 VLFYTPWCRF True NCI_RA007_Epitope_Rep2 1330.65325000778 1330.65160490379 16.894 3 -0.9908200887451715 0.30393217170705655 1.0 ['ENSG00000113621|ENST00000358387|TXNDC15', 'nc|ENSG00000113621|Q96J42-2|TXNDC15', 'ENST00000506350.1_1_5:134223848-134231723:+|nuORF'] 121177 6363 VESETHLGT True NCI_RA007_Epitope_Rep3 971.4559896698698 971.45488993586 32.03 2 -0.9908282025797834 0.30394146549882506 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A'] 128159 15624 VPLPSDISLLL True PC9_epitope_Rep3 1165.69582601241 1165.69417490379 65.245 3 -0.9908613113221595 0.30394670084648456 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 11107 14519 DCYVDHVL True PC9_epitope_Rep3 962.4167677101799 962.41566993586 60.97 2 -0.9908781993749715 0.30394670084648456 1.0 ['ENST00000610272.1_1_1:179850989-179851172:-|nuORF'] 66343 9793 LSGARTFRLAP True NCI_RA007_Epitope_Rep2 1187.6774906096698 1187.67638993586 42.716 2 -0.9909988663299236 0.3039693453851186 1.0 ['ENSG00000125910|ENST00000246115|S1PR4'] 104836 17238 SRALDVPLL True PC9_epitope_Rep6 982.58113061334 982.58002993586 78.904 2 -0.9910824072019563 0.3039972230381031 1.0 ['ENST00000460343.5_1_3:53260493-53260973:-|nuORF'] 142147 24310 YVRRYSVD True PC9_epitope_Rep3 1056.53524305008 1056.5341499358601 98.821 2 -0.9911014396948058 0.3039972230381031 1.0 ['ENSG00000084090|ENST00000337288|STARD7'] 117875 9559 TVYWYKDGK True H1975_Epitope_Rep1 1158.5709598524597 1158.5698699358602 41.695 2 -0.9911083960359849 0.3039972230381031 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 66501 10268 LSHGVQTMV True PC9_epitope_Rep1 970.49060135678 970.48950993586 44.381 2 -0.9912416307256208 0.3040384487016888 1.0 ['NCAM2|p.R546L|1|0.33|ENSG00000154654|chr21:21432264-21432264|G/T|missense_variant'] 123876 21253 VGRRLPGS True PC9_epitope_Rep1 840.4929843152798 840.49188993586 86.573 2 -0.991242650216205 0.3040384487016888 1.0 ['ENSG00000159445|ENST00000368814|THEM4'] 132252 6456 VTVQGGYFPPV True NCI_RA007_Epitope_Rep5 1162.60225998074 1162.60060490379 31.498 3 -0.9912485327886452 0.3040384487016888 1.0 ['ZFHX4|p.G3280V|1|0.3|ENSG00000091656|chr8:76863553-76863553|G/T|missense_variant'] 31123 7536 GAVPTEGAV True NCI_RA007_Epitope_Rep3 799.4075829254699 799.40648993586 36.765 2 -0.9913319592232847 0.3040477398339252 1.0 ['ENST00000452733.6_1_19:48972489-48972630:+|nuORF'] 19521 9787 ELPLQDEP True H1975_Epitope_Rep3 939.45492704071 939.45382993586 42.669 2 -0.9914255736948202 0.30406749342553163 1.0 ['ENSG00000198844|ENST00000361926|ARHGEF15'] 65252 10085 LQTEKETLFN True NCI_RA007_Epitope_Rep5 1221.62411762413 1221.6230299358601 45.427 2 -0.991434456663248 0.30406749342553163 1.0 ['ENST00000473581.5_1_X:48834665-48847670:-|nuORF', 'nc|ENSG00000068400|Q4V328-2|GRIPAP1', 'nc|ENSG00000068400|Q4V328-4|GRIPAP1', 'ENSG00000068400|ENST00000376423|GRIPAP1'] 22182 9047 ESTWEKPQELK True NCI_RA007_Epitope_Rep2 1373.6826951294095 1373.68158993586 39.792 2 -0.9914505346438149 0.30406749342553163 1.0 ['ENST00000507175.5_1_5:145826912-145859658:+|nuORF', 'nc|ENSG00000113649|O14776-2|TCERG1', 'nc|ENSG00000113649|O14776|TCERG1', 'ENSG00000113649|ENST00000679501|TCERG1', 'ENST00000513298.5_1_5:145838810-145849312:+|nuORF'] 107763 21073 SVSTFYSV True PC9_epitope_Rep3 888.42289863644 888.42180993586 86.339 2 -0.9914526318011709 0.30406749342553163 1.0 ['PKHD1|p.I3462V|1|0.15|ENSG00000170927|chr6:51659742-51659742|T/C|missense_variant'] 68940 12263 LTPDQDEPPFK True NCI_RA007_Epitope_Rep2 1285.6190322436898 1285.61792993586 52.3 2 -0.9914575474031353 0.30406749342553163 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE'] 137431 6289 YEDESRKETNK True NCI_RA007_Epitope_Rep2 1397.6422868694096 1397.64064490379 29.069 3 -0.9915703590635774 0.30419692439128576 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 49491 4310 KFFFFFTQISP True H1975_Epitope_Rep3 1407.7227094665898 1407.7216099358602 21.694 2 -0.99162899740032 0.3042195613578418 1.0 ['ENST00000501499.1_1_12:98880883-98897610:-|nuORF'] 70210 13512 LVQHVQFIF True PC9_epitope_Rep4 1129.6284151589298 1129.62676490379 59.871 3 -0.9916878810132278 0.30422478809317227 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'ENST00000462984.1_1_X:70346235-70347318:+|nuORF'] 15157 4276 EAAGQRHMRAC True H1975_Epitope_Rep2 1228.5553439550001 1228.55424993586 21.562 2 -0.9916944495773736 0.30422478809317227 1.0 ['ENST00000243077.7_1_12:57603875-57604111:+|nuORF'] 118457 21103 TYPISLMLPP True PC9_epitope_Rep3 1130.60456847986 1130.6034699358602 86.454 2 -0.9917531430202483 0.304234075497891 1.0 ['ENST00000390547.3_3_14:106174264-106174703:-|nuORF'] 117093 22616 TVISLLAEK True PC9_epitope_Rep3 972.5855472874399 972.58499496793 92.26 1 -0.9917693581663627 0.30424336265467117 1.0 ['ENST00000359154.6_1_16:69973895-69974054:+|nuORF'] 11559 17016 DFTPAEEFVP True PC9_epitope_Rep5 1150.51825557326 1150.51714993586 70.471 2 -0.9918327766464528 0.3043060412717905 1.0 ['nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1', 'ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1'] 137835 18975 YERRSRPR True NCI_RA007_Epitope_Rep2 1118.6057226517398 1118.6046299358602 78.663 2 -0.9918891507389002 0.30433505952698736 1.0 ['nc|ENSG00000290842|Q8IVE0|CROCCP3', 'ENST00000591348.5_1_1:16802327-16812083:-|nuORF'] 133310 24750 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63703496793 103.7 1 -0.9918993227346184 0.30433505952698736 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 113853 24768 TNHVLLKLRRP True NCI_RA007_Epitope_Rep5 1345.8306372061297 1345.82954993586 102.76 2 -0.9919828665570866 0.30433505952698736 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 128646 11120 VPVGDWFGIMW True H1975_Epitope_Rep3 1305.6216155263298 1305.6205099358601 47.868 2 -0.9919835880116666 0.30433505952698736 1.0 ['ENST00000525422.5_1_11:18014527-18022084:-|nuORF', 'ENST00000527494.5_1_11:18014527-18021108:-|nuORF'] 43480 16977 IGKIFKPWKWR True NCI_RA007_Epitope_Rep3 1457.8659600856897 1457.86432490379 74.642 3 -0.9919963689148338 0.30433505952698736 1.0 ['nc|ENSG00000112419|O75167-5|PHACTR2', 'nc|ENSG00000112419|O75167-2|PHACTR2', 'nc|ENSG00000112419|O75167|PHACTR2', 'ENSG00000112419|ENST00000440869|PHACTR2', 'ENST00000545919.1_1_6:143999315-144033340:+|nuORF', 'ENST00000402863.3_1_6:143999267-144075081:+|nuORF'] 4956 9587 ALGIDGLLALR True H1975_Epitope_Rep1 1110.67609362734 1110.6749899358601 41.801 2 -0.9920164319237774 0.30433505952698736 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 67098 7633 LSQGSPLSWE True NCI_RA007_Epitope_Rep2 1102.5294889632999 1102.52838993586 34.315 2 -0.9920576222195683 0.30435769102435767 1.0 ['ENSG00000001084|ENST00000650454|GCLC', 'GCLC|p.W297Lfs*10|1|0.21|ENSG00000001084|chr6:53508650-53508651|-/A|frameshift_variant'] 123025 18863 VGILPGEPT True PC9_epitope_Rep5 881.48583324617 881.48472993586 77.574 2 -0.9920808645835252 0.30436697541574353 1.0 ['ENST00000171887.8_1_2:218667769-218668381:-|nuORF'] 69345 8938 LTVMVRER True NCI_RA007_Epitope_Rep5 1002.5644350033799 1002.56332993586 41.041 2 -0.9921832423168013 0.3043948271029908 1.0 ['nc|ENSG00000167578|P61018-2|RAB4B', 'ENST00000597476.5_1_19:41285769-41292865:+|nuORF'] 60172 13456 LGNWYLMP True PC9_epitope_Rep1 992.4789740439198 992.47786993586 56.616 2 -0.9922011489013615 0.3043948271029908 1.0 ['ITM2A|p.C160W|1|0.5|ENSG00000078596|chrX:79362653-79362653|G/C|missense_variant'] 126186 7251 VLFYLQNHRY True PC9_epitope_Rep3 1351.70370535751 1351.70206490379 32.901 3 -0.9922169395273379 0.3043948271029908 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 7579 13088 ASEVEERRLRM True NCI_RA007_Epitope_Rep2 1374.7037820105 1374.70268993586 55.538 2 -0.9922234353036546 0.30440411050313626 1.0 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 123747 9373 VGRGYASP True PC9_epitope_Rep3 805.4082516318099 805.40714993586 40.992 2 -0.9922587936343774 0.3044267392667921 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 8457 9378 ATPVQTSQPD True H1975_Epitope_Rep1 1042.4931034545798 1042.49200993586 40.982 2 -0.9923993508853549 0.3044679317799664 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 131995 15871 VTSNAALTLR True NCI_RA007_Epitope_Rep5 1044.5927579262 1044.5916699358602 67.768 2 -0.9924178288123325 0.3044679317799664 1.0 ['ENSG00000154734|ENST00000284984|ADAMTS1', 'ADAMTS1|p.S639Vfs*40|1|0.21|ENSG00000154734|chr21:26839701-26839701|C/-|frameshift_variant'] 12720 9758 DLEDKFLCFTS True NCI_RA007_Epitope_Rep1 1316.5958542709598 1316.5947499358601 41.958 2 -0.9924371867376114 0.3044679317799664 1.0 ['ENST00000559108.1_1_15:63354467-63358183:+|nuORF'] 55695 13231 LALGLRGWLR True H1975_Epitope_Rep1 1153.7083968151298 1153.7072899358602 55.99 2 -0.9924877513146454 0.30449577645221987 1.0 ['ENST00000549336.5_1_12:48237795-48237879:-|nuORF'] 30658 4732 GAKSKKDP True PC9_epitope_Rep3 829.4657665079299 829.46466993586 23.293 2 -0.9925270412556997 0.30449577645221987 1.0 ['ENSG00000122870|ENST00000373886|BICC1', 'nc|ENSG00000122870|Q9H694-2|BICC1'] 79982 15463 PEVTCSRQ True NCI_RA007_Epitope_Rep5 918.4229157197799 918.42180993586 66.175 2 -0.992541516884686 0.30449577645221987 1.0 ['ENST00000226091.2_1_17:7613719-7613785:+|nuORF'] 67684 23109 LSWFFLLIRYK True PC9_epitope_Rep5 1484.8543923424797 1484.8532899358602 93.875 2 -0.9925788316826055 0.30450099414190207 1.0 ['ENSG00000196376|ENST00000360388|SLC35F1', 'nc|ENSG00000196376|Q5T1Q4-2|SLC35F1'] 52953 20677 KPGPRARPQP True H1975_Epitope_Rep2 1102.6359601508598 1102.63486993586 85.641 2 -0.9926054697998042 0.30450099414190207 1.0 ['ENST00000298229.6_1_11:71935907-71935967:+|nuORF'] 70114 10206 LVPELQAT True PC9_epitope_Rep3 869.4858332461699 869.48472993586 44.208 2 -0.9926215349571686 0.30450621155308844 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 102338 4506 SLSSSSPSLCR True NCI_RA007_Epitope_Rep2 1122.5339227207398 1122.53282993586 22.158 2 -0.9926450466170355 0.30450621155308844 1.0 ['ENST00000263980.7_1_1:27429796-27432431:-|nuORF'] 86884 24862 QLRQLRMWKMQ True H1975_Epitope_Rep2 1516.8118929908399 1516.8107899358602 102.2 2 -0.9926595115992334 0.3045154919804649 1.0 ['nc|ENSG00000173867|Q7L5Y6-2|DET1', 'ENSG00000140543|ENST00000268148|DET1', 'ENST00000557837.1_1_15:89060105-89074648:-|nuORF'] 100084 18694 SISAGLQKMV True PC9_epitope_Rep3 1032.56376629704 1032.5626699358602 77.127 2 -0.9926845514614596 0.30452477216017504 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 85055 10503 QEINYTRPV True NCI_RA007_Epitope_Rep4 1118.57202248162 1118.57092993586 47.249 2 -0.9927005769263954 0.3045433317766362 1.0 ['ENSG00000150672|ENST00000376104|DLG2', 'nc|ENSG00000150672|Q15700-5|DLG2', 'nc|ENSG00000150672|Q15700-3|DLG2', 'nc|ENSG00000150672|Q15700|DLG2', 'nc|ENSG00000150672|Q15700-4|DLG2'] 135972 18269 WQKEEGRIITK True NCI_RA007_Epitope_Rep2 1386.7619485096195 1386.76030490379 75.82 3 -0.9927095883564923 0.3045433317766362 1.0 ['ENST00000230480.10_1_6:43742087-43745211:+|nuORF'] 81908 11709 PLSFHWACV True PC9_epitope_Rep3 1058.5007721176598 1058.49966993586 50.057 2 -0.9927873662824244 0.3045885759269884 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant'] 109679 6452 TEAWKENT True PC9_epitope_Rep1 977.44542498617 977.44432993586 29.623 2 -0.9928396243877734 0.3045885759269884 1.0 ['SYNE2|p.I3801K|1|0.28|ENSG00000054654|chr14:64081498-64081498|T/A|missense_variant'] 68465 14461 LTFFHFFFFFK True H1975_Epitope_Rep1 1526.7750793926195 1526.77398993586 60.821 2 -0.9928698136695389 0.30458911419423695 1.0 ['ENST00000226230.7_1_17:26653793-26654375:+|nuORF'] 28646 19974 FSLQQLRVL True PC9_epitope_Rep3 1102.6498788795 1102.6487899358601 82.076 2 -0.9929700137154776 0.30458911419423695 1.0 ['ENSG00000137507|ENST00000260061|LRRC32', 'LRRC32|p.Y404Ifs*27|1|0.32|ENSG00000137507|chr11:76660384-76660385|-/G|frameshift_variant', 'LRRC32|p.P265Rfs*6|1|0.3|ENSG00000137507|chr11:76660799-76660799|G/-|frameshift_variant'] 112063 13845 TITHLLRTHL True NCI_RA007_Epitope_Rep2 1203.70879073795 1203.7076899358601 58.504 2 -0.9929869146347841 0.30458911419423695 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5', 'ENST00000475300.1_1_10:45935943-45936950:+|nuORF'] 88466 24759 QSSFLKRIKKR True NCI_RA007_Epitope_Rep5 1389.8568519539697 1389.85574993586 102.72 2 -0.9930041201184936 0.30458911419423695 1.0 ['ENST00000269195.5_1_18:33243615-33243678:+|nuORF'] 30460 14251 GAFSESIFASL True PC9_epitope_Rep1 1127.54989005471 1127.5487899358602 59.641 2 -0.9930498789715066 0.30458911419423695 1.0 ['ENST00000343855.5_1_7:150028109-150028460:+|nuORF'] 102618 7034 SLWNYDYSPPP True NCI_RA007_Epitope_Rep2 1337.5928174958499 1337.59172993586 31.983 2 -0.9930615217638101 0.30458911419423695 1.0 ['TAF1L|p.A316S|1|0.62|ENSG00000122728|chr9:32634634-32634634|C/A|missense_variant'] 86957 12876 QLVSCSLAQVW True NCI_RA007_Epitope_Rep5 1232.62234380232 1232.62124993586 56.212 2 -0.9930816464835528 0.30458911419423695 1.0 ['ENST00000497036.5_1_22:50688078-50688743:-|nuORF'] 30026 6550 FYEGPPGAP True NCI_RA007_Epitope_Rep2 933.4232329896098 933.42212993586 30.09 2 -0.9930978580924056 0.30458911419423695 1.0 ['ENSG00000187942|ENST00000344642|LDLRAD2'] 127535 5754 VNQKQEPGPAQ True H1975_Epitope_Rep2 1194.5992998586198 1194.59820993586 27.13 2 -0.9931059566031941 0.30458911419423695 1.0 ['nc|ENSG00000132016|Q0VDD7-2|BRME1', 'ENSG00000132016|ENST00000586783|BRME1'] 85574 4748 QGFEYKSGQ True NCI_RA007_Epitope_Rep5 1042.47197408718 1042.47086993586 24.948 2 -0.9931541762586401 0.30458911419423695 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1', 'nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2'] 78707 23922 PAAAAAATTT True PC9_epitope_Rep2 844.4290466460401 844.4284949679301 97.495 1 -0.9931997728462509 0.30458911419423695 1.0 ['ENSG00000188613|ENST00000425699|NANOS1'] 32976 22134 GIEMKFKNMLF True PC9_epitope_Rep5 1356.6934005675996 1356.69230993586 90.173 2 -0.993231061607094 0.30458911419423695 1.0 ['ENSG00000158125|ENST00000379416|XDH'] 13566 7943 DPDTGLVLLT True H1975_Epitope_Rep1 1042.55464108198 1042.55354993586 35.503 2 -0.993267083937345 0.30458911419423695 1.0 ['nc|ENSG00000262246|P57737-2|CORO7', 'nc|ENSG00000262246|P57737-4|CORO7', 'ENSG00000262246|ENST00000251166|CORO7', 'nc|ENSG00000262246|P57737-3|CORO7', 'ENST00000575531.5_1_16:4407102-4412712:-|nuORF', 'ENST00000575714.5_1_16:4408319-4455566:-|nuORF', 'ENST00000572125.1_1_16:4409158-4409606:-|nuORF'] 36070 6744 GVAAPFPK True PC9_epitope_Rep4 785.44357451137 785.44246993586 33.134 2 -0.9933040311562065 0.304598391163405 1.0 ['ENSG00000128564|ENST00000249330|VGF'] 57979 5244 LEGVPPSK True NCI_RA007_Epitope_Rep2 825.4596184983301 825.45852993586 25.02 2 -0.9934640579532541 0.3046877084389424 1.0 ['ENSG00000110987|ENST00000261822|BCL7A', 'nc|ENSG00000110987|Q4VC05-2|BCL7A'] 74338 28017 NEPAYVWLWL True PC9_epitope_Rep5 1289.6444591458899 1289.64280490379 115.69 3 -0.9934860544982062 0.3046969838453637 1.0 ['nc|ENSG00000140284|O14975-2|SLC27A2', 'ENSG00000140284|ENST00000267842|SLC27A2'] 122386 8301 VGDNRVVL True PC9_epitope_Rep1 870.4923156089399 870.49120993586 36.763 2 -0.9935019538002016 0.3047021943573668 1.0 ['ENSG00000117983|ENST00000529681|MUC5B'] 138001 17943 YFSAECPDP True H1975_Epitope_Rep2 1027.3956979124298 1027.39517496793 74.339 1 -0.9935206976763613 0.3047021943573668 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 17455 4969 EHEVRLSP True H1975_Epitope_Rep3 965.4930438849299 965.49194993586 24.241 2 -0.9935351662370038 0.30470334009177247 1.0 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF', 'ENST00000564808.6_1_16:19125342-19138551:+|nuORF'] 85021 7322 QEHERQVKWER True NCI_RA007_Epitope_Rep2 1523.7593227406699 1523.75822993586 33.102 2 -0.9935543905725338 0.30470334009177247 1.0 ['ENST00000587472.5_1_19:45572355-45572502:+|nuORF'] 129760 17687 VRRAGLGP True NCI_RA007_Epitope_Rep4 824.4980696957199 824.49696993586 76.529 2 -0.9935557759477536 0.30470334009177247 1.0 ['ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 92248 21222 RLKKTWSKVK True H1975_Epitope_Rep2 1272.8030254759599 1272.80137490379 87.831 3 -0.9935915478359897 0.30470855008670134 1.0 ['ENSG00000198915|ENST00000395810|RASGEF1A', 'nc|ENSG00000198915|Q8N9B8-2|RASGEF1A'] 30362 21374 GADEARSWDFL True PC9_epitope_Rep1 1265.56766537717 1265.5665699358601 87.047 2 -0.9936309716711809 0.30470855008670134 1.0 ['ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 55326 12460 LAEESLPTTP True PC9_epitope_Rep5 1056.5339056374 1056.53280993586 52.927 2 -0.9936644949376109 0.30471375980366006 1.0 ['WDR75|p.L808Ffs*9|1|0.3|ENSG00000115368|chr2:189475348-189475348|G/-|frameshift_variant', 'ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 122918 6838 VGHRQHQL True PC9_epitope_Rep4 973.52059604545 973.51948993586 33.524 2 -0.9936707541661651 0.30471375980366006 1.0 ['ENST00000261609.11_1_15:28465605-28465737:-|nuORF'] 82721 7393 PRAPWMEQEGP True H1975_Epitope_Rep1 1296.5921063031997 1296.59100993586 33.441 2 -0.9937775782347201 0.3047630480306244 1.0 ['ENST00000476601.5_1_6:29760033-29760482:+|nuORF', 'ENST00000446817.1_1_6:29760033-29760488:+|nuORF', 'ENST00000457107.5_1_6:29760033-29761240:+|nuORF'] 5041 11525 ALKDVHNYL True NCI_RA007_Epitope_Rep1 1071.57129420563 1071.57018993586 48.797 2 -0.9938069996542819 0.3047641912078532 1.0 ['ENSG00000158571|ENST00000375006|PFKFB1', 'nc|ENSG00000158571|P16118-2|PFKFB1'] 123469 6840 VGPASGGGER True NCI_RA007_Epitope_Rep2 885.43044362837 885.4298949679301 31.222 1 -0.9938388512625786 0.3047641912078532 1.0 ['ENST00000447623.2_1_1:155164848-155165130:+|nuORF'] 9384 5698 AVSPDRDVD True PC9_epitope_Rep5 972.4512386426 972.4501499358599 26.912 2 -0.9938614263113151 0.3047641912078532 1.0 ['ENST00000515074.1_1_4:163244087-163244557:+|nuORF'] 12851 19095 DLGVLGKQ True H1975_Epitope_Rep1 828.4705175352001 828.4699649679301 79.585 1 -0.9938647282725154 0.30477346386225107 1.0 ['ENSG00000079739|ENST00000371084|PGM1', 'nc|ENSG00000079739|P36871-2|PGM1'] 22876 12404 EVDFYIDK True H1975_Epitope_Rep3 1027.4862271689897 1027.4851299358602 52.901 2 -0.9939889826452849 0.3047972152945413 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF'] 13527 7084 DNRTYRYSNRY True NCI_RA007_Epitope_Rep2 1506.69638813094 1506.69528993586 32.18 2 -0.9940017301992119 0.3047972152945413 1.0 ['nc|ENSG00000105204|Q9Y463-2|DYRK1B', 'nc|ENSG00000105204|Q9Y463-3|DYRK1B', 'ENSG00000105204|ENST00000323039|DYRK1B'] 43089 11485 IEVVASAS True NCI_RA007_Epitope_Rep5 774.4123339527399 774.41122993586 50.826 2 -0.9940249416661832 0.3047972152945413 1.0 ['ENST00000484010.1_1_12:32101431-32101545:+|nuORF'] 32308 14568 GFDAGDCG True NCI_RA007_Epitope_Rep5 740.24355437548 740.24300496793 62.707 1 -0.9940377270668347 0.3047972152945413 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'ENST00000552009.1_1_12:102159833-102159905:-|nuORF'] 77651 7590 NTGYTALSV True PC9_epitope_Rep1 924.4552613938799 924.45416993586 34.015 2 -0.9940602527034221 0.30480242188229334 1.0 ['ENST00000415993.5_1_22:50686492-50688322:-|nuORF'] 46476 9685 ISVFYTMLPP True NCI_RA007_Epitope_Rep4 1166.60456847986 1166.6034699358602 44.103 2 -0.9940979223627323 0.30480242188229334 1.0 ['ENSG00000196772|ENST00000641093|OR14A16'] 20280 10919 ENQVRTLCE True PC9_epitope_Rep5 1090.5077079728999 1090.50660993586 46.989 2 -0.9941767905246152 0.304834300193372 1.0 ['ENSG00000104695|ENST00000221138|PPP2CB'] 1715 5137 AEGPIPCRRM True H1975_Epitope_Rep2 1128.55321869668 1128.5521299358602 24.836 2 -0.9942274259007894 0.304834300193372 1.0 ['nc|ENSG00000080845|Q9Y2H0-1|DLGAP4', 'ENSG00000080845|ENST00000339266|DLGAP4', 'DLGAP4|p.R365L|1|0.14|ENSG00000080845|chr20:36436203-36436203|G/T|missense_variant'] 78920 5504 PAGPPGPPGAI True H1975_Epitope_Rep2 929.4970666362099 929.49596993586 26.183 2 -0.9942464011348048 0.30485690662256953 1.0 ['CON__P04258'] 38168 23107 HDKRKKSRS True PC9_epitope_Rep1 1140.64758746372 1140.64594490379 93.682 3 -0.9942750110542711 0.3048621112711367 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 132153 12038 VTVLWTLL True PC9_epitope_Rep6 943.57425432775 943.57314993586 57.6 2 -0.9942859055144408 0.3048621112711367 1.0 ['ENSG00000069943|ENST00000164305|PIGB'] 94812 5774 RSRANGVP True PC9_epitope_Rep1 855.4674978434299 855.46640993586 27.027 2 -0.9943726161883504 0.3048847164250757 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 96822 17968 SARRLRHPV True PC9_epitope_Rep2 1090.6471935409 1090.6460899358601 74.417 2 -0.9943996692251896 0.3049339911988265 1.0 ['ENSG00000205678|ENST00000381210|TECRL'] 11657 5912 DGPKGASGP True NCI_RA007_Epitope_Rep2 784.3715317699199 784.37042993586 27.613 2 -0.9944555772757857 0.304956594791375 1.0 ['ENSG00000139219|ENST00000380518|COL2A1', 'nc|ENSG00000139219|P02458-1|COL2A1', 'ENST00000493991.5_1_12:48375847-48382223:-|nuORF'] 63316 20172 LLSVGSILQ True PC9_epitope_Rep4 928.5593325395998 928.55878496793 85.728 1 -0.9945352340725243 0.30497919778109667 1.0 ['ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 24210 10084 EYSAMRDQYMR True H1975_Epitope_Rep3 1448.61766942804 1448.61656993586 43.826 2 -0.9946041222164709 0.30501513474590963 1.0 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 12641 11003 DLCPMGFKQQY True H1975_Epitope_Rep2 1328.58932942188 1328.58822993586 47.35 2 -0.9946339613915771 0.30502033468897927 1.0 ['ENSG00000166188|ENST00000299237|ZNF319', 'ZNF319|p.E425Sfs*128|1|0.42|ENSG00000166188|chr16:57996993-57996993|C/-|frameshift_variant'] 98667 24230 SGCGGSAA True H1975_Epitope_Rep1 608.22242500808 608.22187496793 100.5 1 -0.9946911918443629 0.30502033468897927 1.0 ['ENST00000566637.5_1_16:88780822-88781656:+|nuORF'] 113003 8049 TLLYLYENLDP True H1975_Epitope_Rep3 1352.6863835275199 1352.68528993586 35.934 2 -0.9947329087493912 0.30502960157875086 1.0 ['nc|ENSG00000142185|O94759-2|TRPM2', 'ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-3|TRPM2'] 137494 7884 YEEFWIKYAKY True NCI_RA007_Epitope_Rep1 1538.74456710998 1538.74346993586 34.66 2 -0.994759193038549 0.30503480092802476 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 110443 21741 TFAPVSLLSI True H1975_Epitope_Rep3 1046.60119735158 1046.60010993586 90.881 2 -0.9947628731311241 0.30503480092802476 1.0 ['ENST00000316292.13_1_6:74230456-74230621:-|nuORF'] 75663 11005 NLGFLHARV True PC9_epitope_Rep6 1025.57704829241 1025.57594993586 53.224 2 -0.9947808482701477 0.3050411316880658 1.0 ['ENST00000371975.8_1_1:46713425-46713950:+|nuORF'] 124146 20577 VGSRSVAGV True PC9_epitope_Rep3 830.4610154806599 830.45990993586 84.416 2 -0.9948523789753696 0.3050411316880658 1.0 ['ENSG00000144659|ENST00000650617|SLC25A38'] 59062 8346 LEVYQELSDLP True H1975_Epitope_Rep1 1304.6499980187998 1304.64890993586 37.034 2 -0.9948808375450945 0.3050411316880658 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 139402 8985 YLNTDFVSVK True NCI_RA007_Epitope_Rep1 1184.607739284 1184.60664993586 38.95 2 -0.994897712372585 0.3050411316880658 1.0 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674'] 10985 7761 DALKLSSDVQK True H1975_Epitope_Rep3 1202.65066672514 1202.6495699358602 34.837 2 -0.9949102994576232 0.3050411316880658 1.0 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 96555 10970 SAEIIASL True PC9_epitope_Rep5 802.44363408102 802.44252993586 47.185 2 -0.994914087863146 0.30505039731214334 1.0 ['ENST00000528727.5_1_11:99426939-100095567:+|nuORF', 'CNTN5|p.T768Kfs*13|1|0.39|ENSG00000149972|chr11:100271230-100271230|C/-|frameshift_variant', 'nc|ENSG00000149972|O94779-4|CNTN5', 'CNTN5|p.W914Gfs*24|1|0.46|ENSG00000149972|chr11:100340472-100340472|T/-|frameshift_variant', 'nc|ENSG00000149972|O94779-2|CNTN5', 'ENSG00000149972|ENST00000524871|CNTN5'] 94959 8931 RTLCLHFPL True PC9_epitope_Rep4 1098.6008205121 1098.59972993586 41.894 2 -0.9949995214103957 0.30511299246716883 1.0 ['chr18:73200789-73255813|280|37.79|0.36|6.73|-|0|LINC02864,LINC02864|1'] 82161 16082 PNLQKEND True PC9_epitope_Rep6 956.45632402304 956.45522993586 74.19 2 -0.9950047706570445 0.3051222568861158 1.0 ['ENST00000552369.5_1_12:49233297-49239534:-|nuORF', 'ENST00000547135.5_1_12:49231823-49239549:-|nuORF'] 113489 18278 TLTCALMLL True PC9_epitope_Rep2 977.52896101145 977.5278699358599 75.627 2 -0.9950335808641542 0.3051274530716723 1.0 ['nc|ENSG00000059915|A5PKW4-2|PSD', 'ENSG00000059915|ENST00000020673|PSD', 'ENST00000488194.1_1_10:104165349-104171476:-|nuORF', 'ENSG00000146005|ENST00000274710|PSD2'] 35437 4199 GSGIWKDYKL True NCI_RA007_Epitope_Rep2 1165.6131590176099 1165.61206993586 20.973 2 -0.9950522024918399 0.3051274530716723 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 40709 6918 HRSIAECAL True PC9_epitope_Rep1 998.49674936638 998.49564993586 31.416 2 -0.9951298530654032 0.30521263831489137 1.0 ['DIP2B|p.V1495L|1|0.15|ENSG00000066084|chr12:50744591-50744591|G/T|missense_variant'] 15351 7162 EAGGHHRP True H1975_Epitope_Rep2 859.40489758687 859.40380993586 32.483 2 -0.9951391438618317 0.30521263831489137 1.0 ['nc|ENSG00000160285|P48449-2|LSS', 'nc|ENSG00000160285|P48449-3|LSS', 'ENSG00000160285|ENST00000397728|LSS'] 48526 9095 KAKTAVTEL True PC9_epitope_Rep4 959.56514619603 959.56404993586 42.57 2 -0.9952049280028731 0.3052178318135765 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-1|ZMYM6', 'ENST00000493328.5_1_1:35455862-35480681:-|nuORF'] 37637 23470 GVWILYILKF True PC9_epitope_Rep5 1250.7427166351797 1250.7416099358602 95.263 2 -0.9952122856626032 0.3052178318135765 1.0 ['ST3GAL5|p.L85F|1|0.36|ENSG00000115525|chr2:85861244-85861244|T/A|missense_variant'] 85478 23490 QFLRLLLLWVP True PC9_epitope_Rep1 1396.8594777229198 1396.85838993586 95.14 2 -0.9953190172595979 0.3052230250353267 1.0 ['nc|ENSG00000211626|A0A0C4DH26|IGKV6D-41'] 25822 11056 FFELEIEALP True PC9_epitope_Rep1 1206.6172413385398 1206.6161499358602 47.415 2 -0.995322509510335 0.3052230250353267 1.0 ['DAXX|p.L566F|1|0.3|ENSG00000204209|chr6:33319624-33319624|G/A|missense_variant'] 66447 12047 LSGQNAQMPV True PC9_epitope_Rep4 1043.50697969691 1043.50588993586 54.145 2 -0.9954044731694028 0.3052722788775578 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 46770 6670 ITFFRMKVQ True H1975_Epitope_Rep3 1168.6426853240798 1168.64158993586 30.61 2 -0.9954394168403222 0.30528153993814655 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B', 'UNC13A|p.S975N|1|0.81|ENSG00000130477|chr19:17639458-17639458|C/T|missense_variant', 'ENSG00000130477|ENST00000519716|UNC13A', 'UNC13A|p.P1139Rfs*2|1|0.15|ENSG00000130477|chr19:17632794-17632795|-/C|frameshift_variant'] 33442 10244 GLALLWYDWLP True NCI_RA007_Epitope_Rep2 1345.7070594024499 1345.7059699358601 44.439 2 -0.9954747140144101 0.30529080075182957 1.0 ['ENST00000555918.1_1_14:36295434-36295554:-|nuORF'] 118264 20661 TYLFVQLCKV True PC9_epitope_Rep3 1212.65766668188 1212.65656993586 84.746 2 -0.9955008698287916 0.3052959916821072 1.0 ['ENST00000596232.1_1_19:36036641-36037015:+|nuORF'] 65669 9341 LSAPQKPQL True PC9_epitope_Rep4 980.5654805492 980.56438993586 43.538 2 -0.9955415319629618 0.3052959916821072 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 105538 11674 SSASIGDMEKE True PC9_epitope_Rep5 1152.49686850568 1152.4957699358602 49.9 2 -0.9955946247267735 0.30530525193281793 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 110494 6880 TFGGLLGEKTR True NCI_RA007_Epitope_Rep5 1177.64552177505 1177.64386490379 33.144 3 -0.9956970349498402 0.3053411711387478 1.0 ['ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 130436 8478 VSNEQEVLR True H1975_Epitope_Rep1 1072.5512870370399 1072.55018993586 37.54 2 -0.9957401130368624 0.3053567382408999 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 128611 17543 VPTVPVKN True PC9_epitope_Rep3 852.50690304392 852.50580993586 72.663 2 -0.9957498389358738 0.3053567382408999 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 99540 8690 SIDYEENK True H1975_Epitope_Rep3 996.4400052525599 996.43890993586 38.425 2 -0.9958050991002022 0.3053567382408999 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R2486Efs*2|1|0.46|ENSG00000168702|chr2:140541030-140541030|T/-|frameshift_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 36707 6571 GVISLPVGAT True PC9_epitope_Rep4 912.5280324113199 912.52692993586 32.428 2 -0.9958103131034176 0.3053567382408999 1.0 ['RBM15|p.G910Afs*41|1|0.87|ENSG00000162775|chr1:110342129-110342129|G/-|frameshift_variant'] 125720 21540 VKRLLKKQVVR True NCI_RA007_Epitope_Rep4 1365.92962297141 1365.92797490379 93.386 3 -0.9958213124262398 0.3053567382408999 1.0 ['ENSG00000175931|ENST00000319380|UBE2O'] 45540 7407 IQRMVWPP True H1975_Epitope_Rep3 1025.5480566632498 1025.54694993586 33.468 2 -0.9958283869793009 0.3053567382408999 1.0 ['ENST00000512062.5_1_16:69497047-69497263:+|nuORF'] 86554 8158 QLDREEKENYR True H1975_Epitope_Rep1 1478.7113694887398 1478.70973490379 36.321 3 -0.9958740782114256 0.3053659966945674 1.0 ['PCDH20|p.K604N|1|0.52|ENSG00000280165|chr13:61412287-61412287|C/G|missense_variant'] 80880 17054 PHVALRVAL True PC9_epitope_Rep5 974.60253476426 974.60142993586 70.617 2 -0.9959305824608716 0.3053978408636545 1.0 ['ENST00000248248.7_1_16:77225118-77227542:+|nuORF'] 22685 9820 ETQRDQERRIR True H1975_Epitope_Rep1 1485.7760354339696 1485.7749299358602 42.701 2 -0.9959663726997505 0.3053978408636545 1.0 ['ENST00000575300.1_1_16:4312060-4322792:-|nuORF', 'ENSG00000090447|ENST00000204517|TFAP4'] 60734 17572 LHRGRRLLGP True PC9_epitope_Rep5 1173.7206928343298 1173.71958993586 72.599 2 -0.9960156744590231 0.3053989577919049 1.0 ['ENST00000424383.4_1_7:1784183-1785002:+|nuORF'] 45197 9294 IPRDQSPSL True PC9_epitope_Rep5 1011.53490869691 1011.53380993586 40.7 2 -0.9960291205662943 0.3053989577919049 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 74693 9973 NGSISLAVP True PC9_epitope_Rep3 856.4654321547599 856.46432993586 43.317 2 -0.9960300832913789 0.3053989577919049 1.0 ['ENSG00000185565|ENST00000490035|LSAMP', 'LSAMP|p.W325C|1|0.22|ENSG00000185565|chr3:115810359-115810359|C/A|missense_variant'] 59227 14470 LFEQRRLQQQ True PC9_epitope_Rep5 1344.72623170724 1344.7251299358602 60.66 2 -0.9961384477566565 0.3055548151504651 1.0 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2', 'ENST00000489952.5_1_11:64559674-64566943:-|nuORF', 'MAP4K2|p.G557C|1|0.29|ENSG00000168067|chr11:64796355-64796355|C/A|missense_variant', 'ENST00000470088.5_1_11:64559674-64564762:-|nuORF'] 123112 12293 VGKKYHNSANK True PC9_epitope_Rep1 1244.6625688215197 1244.6614699358602 52.139 2 -0.996204344040719 0.3055773972146332 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10'] 3566 4690 AGLVVPCQWGP True H1975_Epitope_Rep2 1125.5641006502099 1125.56300993586 23.135 2 -0.9962475721039327 0.30562255953729495 1.0 ['ENST00000283629.7_1_3:33481464-33481797:-|nuORF'] 110536 12340 TFLSQQEELR True NCI_RA007_Epitope_Rep5 1249.6302656337298 1249.62916993586 54.115 2 -0.9962514285664056 0.30562255953729495 1.0 ['ENST00000523856.5_1_5:141026049-141027048:-|nuORF'] 139623 9632 YLYYWLKHHYN True NCI_RA007_Epitope_Rep2 1598.7670338900598 1598.7653849037902 42.083 3 -0.9963364573805362 0.3056329206700337 1.0 ['ENST00000249377.4_1_7:102582770-102585051:+|nuORF', 'LRRC17|p.I437Lfs*3|1|0.29|ENSG00000128606|chr7:102944589-102944589|A/-|frameshift_variant', 'ENSG00000128606|ENST00000339431|LRRC17'] 124334 17766 VGTRHKAL True PC9_epitope_Rep6 880.52428444356 880.52318993586 80.97 2 -0.9963407595451271 0.3056329206700337 1.0 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 116493 8491 TTPPKQPNP True PC9_epitope_Rep1 978.5134449763399 978.51234993586 37.496 2 -0.9963640797196603 0.3056329206700337 1.0 ['ENST00000592937.1_1_19:2477660-2478092:+|nuORF'] 56196 9086 LAYFFDAPE True PC9_epitope_Rep4 1071.4913125494297 1071.49020993586 42.536 2 -0.9963663333969643 0.3056329206700337 1.0 ['nc|ENSG00000058799|Q9Y548-2|YIPF1', 'ENSG00000058799|ENST00000072644|YIPF1'] 37640 10201 GVWKMKVP True NCI_RA007_Epitope_Rep5 943.5313439699498 943.53024993586 45.871 2 -0.9963896166742883 0.305655499586898 1.0 ['nc|ENSG00000163412|Q8N5X7-2|EIF4E3', 'ENSG00000163412|ENST00000425534|EIF4E3'] 65282 4698 LQVSTTLAA True NCI_RA007_Epitope_Rep3 902.50729696674 902.50618993586 25.423 2 -0.9964246623098135 0.30567807790200285 1.0 ['chr20:58991436-58992762|336|10.28|0.0|19.97|-|0|CTSZ,CTSZ|1'] 135580 21993 WLAANNGD True PC9_epitope_Rep2 859.38243080679 859.38132993586 90.07 2 -0.9964426997521922 0.30568733009967486 1.0 ['ENSG00000081791|ENST00000432126|DELE1'] 88346 24872 QSIIHKFLTA True PC9_epitope_Rep2 1156.6604435632 1156.65934993586 101.35 2 -0.9964692619350136 0.30571915891586493 1.0 ['nc|ENSG00000095787|Q9BTA9-5|WAC', 'nc|ENSG00000095787|Q9BTA9-2|WAC', 'ENSG00000095787|ENST00000354911|WAC', 'nc|ENSG00000095787|Q9BTA9-3|WAC'] 101570 21720 SLLLLKIVKF True H1975_Epitope_Rep2 1172.7896668276 1172.78856993586 89.848 2 -0.9964722422983896 0.30571915891586493 1.0 ['ENST00000367941.6_1_6:132779201-132779417:-|nuORF'] 109541 18188 TDRQLFDTI True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 75.169 2 -0.99648618284249 0.3057243364246882 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 120493 7866 VEEYVYEFRDK True NCI_RA007_Epitope_Rep1 1475.6932598131095 1475.6921699358602 34.589 2 -0.9964873417844734 0.3057243364246882 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 93956 25358 RRHRRCRRR True PC9_epitope_Rep5 1350.7864384920597 1350.78534993586 102.75 2 -0.9964931636566537 0.3057335873895721 1.0 ['ENSG00000184560|ENST00000333870|SPEM2'] 22810 5152 EVAAVAVLMC True PC9_epitope_Rep4 1004.5034745395999 1004.50236993586 26.501 2 -0.9965551587961258 0.30575616255829446 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 19827 6933 ELSRESSPD True NCI_RA007_Epitope_Rep1 1018.45671794586 1018.45562993586 30.971 2 -0.9966197361830732 0.3057920613982492 1.0 ['ENSG00000196440|ENST00000423738|ARMCX4'] 101660 5411 SLLTSPPP True NCI_RA007_Epitope_Rep5 810.44871946146 810.44762993586 27.501 2 -0.9966593493241462 0.30581463518627083 1.0 ['ENST00000430430.5_1_8:81398575-81399061:+|nuORF'] 23465 8552 EVTRQVAQCK True NCI_RA007_Epitope_Rep2 1160.59719168364 1160.5960899358602 37.908 2 -0.996685408290207 0.30581980973698936 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 133416 6171 VVVRLLIRR True PC9_epitope_Rep3 1122.7713314248597 1122.77022993586 28.78 2 -0.9967261571191427 0.30581980973698936 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant', 'RYR2|p.N3207Kfs*49|1|0.52|ENSG00000198626|chr1:237706985-237706986|-/T|frameshift_variant', 'RYR2|p.E2329K|1|0.23|ENSG00000198626|chr1:237639071-237639071|G/A|missense_variant'] 120075 18757 VDTRLRAL True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 78.978 2 -0.9967941913018703 0.30584238225301447 1.0 ['ENSG00000251692|ENST00000447419|PTX4', 'nc|ENSG00000251692|Q96A99-2|PTX4'] 37481 7780 GVVCCSSC True NCI_RA007_Epitope_Rep4 756.26046739292 756.25936993586 36.606 2 -0.996932258360891 0.3059448944787892 1.0 ['ENST00000563829.5_1_15:75145788-75146232:-|nuORF'] 89520 9185 QYLETIPESEP True NCI_RA007_Epitope_Rep4 1304.6136125100797 1304.61250993586 42.175 2 -0.997025334057006 0.3060074343498941 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 102812 5842 SNNKTKHIEEE True NCI_RA007_Epitope_Rep5 1327.63680756615 1327.6357099358602 29.156 2 -0.9970460830714266 0.30605664952436784 1.0 ['ENSG00000173702|ENST00000616727|MUC13'] 31054 17601 GATFSGYLVY True PC9_epitope_Rep5 1076.5178616504397 1076.51676993586 72.71 2 -0.9971004936056036 0.3060658948294009 1.0 ['ENSG00000172247|ENST00000302514|C1QTNF4'] 79556 4361 PDEERPEPP True H1975_Epitope_Rep2 1064.47745339044 1064.47634993586 21.888 2 -0.9971227827400995 0.30608030694625776 1.0 ['nc|ENSG00000142405|P59046-4|NLRP12', 'nc|ENSG00000142405|P59046-3|NLRP12', 'nc|ENSG00000142405|P59046-6|NLRP12', 'nc|ENSG00000142405|P59046-2|NLRP12', 'NLRP12|p.T1013Nfs*29|1|0.27|ENSG00000142405|chr19:53795919-53795920|-/T|frameshift_variant', 'ENSG00000142405|ENST00000324134|NLRP12', 'nc|ENSG00000142405|P59046-7|NLRP12', 'NLRP12|p.E201K|1|0.27|ENSG00000142405|chr19:53811058-53811058|C/T|missense_variant'] 136177 24649 WRRRQRWRR True NCI_RA007_Epitope_Rep5 1454.8344342302998 1454.83332993586 102.3 2 -0.9971235728476522 0.30608030694625776 1.0 ['ENST00000372724.5_1_10:76586363-76598485:+|nuORF'] 80214 4558 PGAEERRCPVL True H1975_Epitope_Rep3 1225.62374078465 1225.62208490379 22.652 3 -0.9971449463536364 0.30608030694625776 1.0 ['ENST00000265626.8_3_20:56227391-56286474:-|nuORF', 'ENST00000341744.7_2_20:56227391-56284786:-|nuORF'] 79732 23531 PDYGEKKLPQA True PC9_epitope_Rep4 1244.64010204144 1244.63900993586 98.817 2 -0.9971728696032583 0.3060895514434542 1.0 ['ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant'] 88069 10835 QRREQQWMEKK True H1975_Epitope_Rep3 1545.7834293135295 1545.7823299358602 46.756 2 -0.9972681333765687 0.3061121176595971 1.0 ['ENSG00000169914|ENST00000375120|OTUD3'] 47554 9643 IVTQVGPGP True NCI_RA007_Epitope_Rep2 866.4861675993399 866.48506993586 42.125 2 -0.997300748259895 0.30612136148671154 1.0 ['ENST00000565149.5_1_16:88718935-88722722:-|nuORF', 'ENSG00000167508|ENST00000301012|MVD', 'ENST00000562981.1_1_16:88718935-88719839:-|nuORF', 'ENST00000561895.1_1_16:88718935-88721317:-|nuORF'] 615 7749 AASCEVDPS True H1975_Epitope_Rep2 877.3487477200099 877.34764993586 34.76 2 -0.9973121285927761 0.3061306050675406 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 46492 8144 ISVPAPVAAAA True H1975_Epitope_Rep3 965.5545815123298 965.5540349679301 36.303 1 -0.9974211939072607 0.30616757692820035 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 119169 7740 VAIVLENRSS True H1975_Epitope_Rep1 1086.6033226099 1086.6022299358601 34.732 2 -0.9974257417741382 0.30616757692820035 1.0 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'ENST00000585652.5_1_19:2109741-2111012:-|nuORF', 'ENST00000589223.5_1_19:2102174-2111012:-|nuORF'] 130716 13527 VSVLVRHQR True NCI_RA007_Epitope_Rep2 1092.6516102150001 1092.65050993586 57.258 2 -0.9974259015434301 0.30616757692820035 1.0 ['ENSG00000251247|ENST00000420450|ZNF345'] 136079 25098 WRKVLLKG True NCI_RA007_Epitope_Rep1 998.6389202729798 998.6378299358599 103.87 2 -0.9974499940797391 0.30616757692820035 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 76073 1497 NMFEFLKSMR True NCI_RA007_Epitope_Rep1 1301.6260492837698 1301.62441490379 7.9041 3 -0.997575498091905 0.30621270247229326 1.0 ['CYP8B1|p.R59S|1|0.38|ENSG00000180432|chr3:42875642-42875642|G/T|missense_variant'] 94934 7977 RTGWVYRNV True PC9_epitope_Rep4 1149.60432566941 1149.60268490379 38.129 3 -0.9975837868397581 0.30621270247229326 1.0 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'nc|ENSG00000111906|Q7Z4H3-3|HDDC2', 'ENST00000609574.1_1_6:125621682-125623108:-|nuORF'] 142188 11332 YVTVMQNNPL True PC9_epitope_Rep5 1177.58014463717 1177.5784949037902 48.584 3 -0.9976267339030681 0.30622194397453145 1.0 ['ENST00000482071.1_1_3:136664576-136665812:+|nuORF', 'NCK1-IL20RB|2|fusion', 'nc|ENSG00000158092|P16333-2|NCK1', 'NCK1-IL20RB|3|fusion', 'ENSG00000158092|ENST00000481752|NCK1'] 130207 6464 VSERREQRETQ True PC9_epitope_Rep2 1416.7069528146399 1416.7053149037902 30.277 3 -0.9976850626065322 0.3062711458028079 1.0 ['ENST00000313421.11_1_11:60739160-60739313:+|nuORF'] 18063 12994 EIGILCLCVI True PC9_epitope_Rep3 1074.5817248603 1074.58062993586 55.009 2 -0.9977267655656448 0.30632550581403095 1.0 ['ENST00000222374.2_1_19:44126724-44127456:-|nuORF'] 63348 8639 LLTLFFFPV True H1975_Epitope_Rep1 1095.63685458431 1095.63574993586 38.159 2 -0.9977396933431723 0.30632550581403095 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-3|SLC8A3'] 49776 22046 KHAMHQTG True PC9_epitope_Rep1 908.4286698065599 908.42756993586 89.614 2 -0.9977432291711501 0.30632550581403095 1.0 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000581012.6_1_17:30190380-30195078:-|nuORF'] 76077 659 NMGVHKAL True NCI_RA007_Epitope_Rep1 868.45890730568 868.45780993586 3.4735 2 -0.9978160948114634 0.3063706229438325 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000456826.2_1_1:149262279-149263299:+|nuORF', 'FAM91A1|p.R631L|1|0.4|ENSG00000176853|chr8:123806089-123806089|G/T|missense_variant'] 7491 9955 ASDFQFCWNQ True H1975_Epitope_Rep2 1244.49205790876 1244.4909699358602 43.283 2 -0.9978301154610089 0.3063706229438325 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'ENST00000481242.5_1_9:130127572-130155530:+|nuORF', 'ENST00000496711.5_1_9:130126995-130155530:+|nuORF'] 15320 12570 EAFSGEPFNLH True PC9_epitope_Rep2 1246.56185172074 1246.56074993586 53.659 2 -0.9978506627953152 0.30637986148108687 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1'] 110648 23192 TFWKEEKSF True PC9_epitope_Rep4 1200.5815245361598 1200.5804299358601 97.438 2 -0.9979209127679778 0.3064157376699831 1.0 ['ENSG00000123171|ENST00000242819|CCDC70'] 12285 15078 DILSLQVDP True PC9_epitope_Rep1 998.5284263341399 998.5273299358599 62.816 2 -0.9979818627919212 0.3064434500026637 1.0 ['ENST00000526007.5_1_8:145058131-145058521:-|nuORF'] 126376 6688 VLKERLDPET True H1975_Epitope_Rep1 1198.6557521055797 1198.65464993586 30.774 2 -0.9979967259111951 0.3064434500026637 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 36948 20426 GVLVREHFQLL True PC9_epitope_Rep6 1309.75065554993 1309.7495499358602 91.272 2 -0.9980022095703206 0.3064434500026637 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 25189 21672 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 88.409 2 -0.9980355077569039 0.3064660051941133 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 113526 18729 TLTLFLMTI True PC9_epitope_Rep2 1051.59875482343 1051.59764993586 77.42 2 -0.9980638514110427 0.3064784606165524 1.0 ['ENSG00000187554|ENST00000642603|TLR5'] 46805 16865 ITGVIGLNVV True PC9_epitope_Rep1 983.60153170475 983.60042993586 69.696 2 -0.9981148861999339 0.3064784606165524 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G', 'nc|ENSG00000006283|O43497-30|CACNA1G', 'nc|ENSG00000006283|O43497-29|CACNA1G', 'nc|ENSG00000006283|O43497-28|CACNA1G', 'nc|ENSG00000006283|O43497-32|CACNA1G', 'nc|ENSG00000006283|O43497-31|CACNA1G', 'nc|ENSG00000006283|O43497-27|CACNA1G'] 37170 18294 GVQPTRRRQ True NCI_RA007_Epitope_Rep5 1096.62137271588 1096.62077496793 77.167 1 -0.9981192613519254 0.3064784606165524 1.0 ['ENST00000531072.1_1_11:64808545-64809015:+|nuORF'] 93583 7651 RQNDDQRKSNR True PC9_epitope_Rep1 1415.69778511327 1415.6961449037901 34.252 3 -0.9981226376449022 0.3064784606165524 1.0 ['nc|ENSG00000116641|Q96N67-7|DOCK7', 'nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 122092 15097 VGAAMPAG True H1975_Epitope_Rep1 672.3264961537999 672.32594496793 63.325 1 -0.9981237317201932 0.3064784606165524 1.0 ['ENST00000593870.5_1_19:17862334-17865238:+|nuORF', 'ENST00000600209.5_1_19:17858565-17865238:+|nuORF'] 33842 4419 GLPCCWDYS True PC9_epitope_Rep4 1042.38883871018 1042.38774993586 23.448 2 -0.9981438087705758 0.3064784606165524 1.0 ['ENSG00000170634|ENST00000607452|ACYP2'] 44780 13890 IMKARYKTL True PC9_epitope_Rep5 1122.65833538822 1122.65668490379 58.448 3 -0.9981466731273407 0.3064784606165524 1.0 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'nc|ENSG00000100890|O15091-4|PRORP'] 47062 19276 ITSKSKESI True PC9_epitope_Rep5 991.5549754351499 991.55386993586 79.188 2 -0.9981825819318813 0.3064784606165524 1.0 ['ENSG00000073464|ENST00000380833|CLCN4'] 67394 7141 LSSNFLRHVP True NCI_RA007_Epitope_Rep5 1168.6352914445201 1168.6341899358601 34.144 2 -0.9981854031602081 0.3064784606165524 1.0 ['ENSG00000174348|ENST00000312553|PODN', 'nc|ENSG00000174348|Q7Z5L7-2|PODN', 'nc|ENSG00000174348|Q7Z5L7-3|PODN'] 83902 16940 PVPTLWNEPAE True H1975_Epitope_Rep1 1251.6135529404298 1251.6129749679299 70.578 1 -0.998218068715467 0.3064784606165524 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 6581 6557 APVLHLRGSP True PC9_epitope_Rep2 1045.6032630402499 1045.60216993586 30.634 2 -0.9982315398792638 0.30648769574944074 1.0 ['ENST00000562370.5_1_16:583983-597374:+|nuORF', 'ENST00000219611.6_1_16:586082-597374:+|nuORF'] 73738 4805 NAAPGVHL True NCI_RA007_Epitope_Rep5 777.4133370122499 777.41222993586 25.172 2 -0.9982445945864467 0.30651948121121736 1.0 ['KRT25|p.D247H|1|0.19|ENSG00000204897|chr17:40751257-40751257|C/G|missense_variant'] 132270 15976 VTVTVTNN True NCI_RA007_Epitope_Rep3 846.4446967101801 846.44414496793 70.513 1 -0.9982451765637035 0.30651948121121736 1.0 ['DGKD-SAG|2|fusion', 'ENSG00000130561|ENST00000409110|SAG'] 1342 8109 AEDYFNVSL True PC9_epitope_Rep2 1056.47639076128 1056.47528993586 36.548 2 -0.9982743070200226 0.30654203118550183 1.0 ['nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1', 'ENSG00000254221|ENST00000523390|PCDHGB1'] 102055 4801 SLQWRHRWDTP True PC9_epitope_Rep5 1480.7323797168397 1480.73074490379 23.511 3 -0.9982823141528284 0.3065471831267227 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 119095 11539 VAGRDRDDF True NCI_RA007_Epitope_Rep5 1049.4890211336499 1049.4879299358602 51.035 2 -0.9982835092538256 0.3065471831267227 1.0 ['TMEM132E|p.W153R|1|0.4|ENSG00000181291|chr17:34626516-34626516|T/A|missense_variant'] 118843 20677 VAAQRKPCL True PC9_epitope_Rep3 984.5538703196798 984.5527699358599 84.808 2 -0.9983496657289559 0.3065830470560038 1.0 ['ENST00000569981.2_1_16:29820228-29821657:-|nuORF'] 25823 10455 FFELEIEALP True PC9_epitope_Rep2 1206.6172413385398 1206.6161499358602 45.534 2 -0.9984245353211308 0.30659227993555516 1.0 ['DAXX|p.L566F|1|0.3|ENSG00000204209|chr6:33319624-33319624|G/A|missense_variant'] 52805 14824 KNVLTFLEYC True PC9_epitope_Rep4 1228.61619579272 1228.6145549037901 64.959 3 -0.9984707423453246 0.30660151256923734 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 101800 7497 SLPEEDTK True PC9_epitope_Rep5 917.43419159613 917.43308993586 33.787 2 -0.9985190072044381 0.30663737434258703 1.0 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000473223.5_1_1:155184463-155187072:-|nuORF', 'ENST00000459805.5_1_1:155186646-155187358:-|nuORF', 'ENST00000460156.1_1_1:155207923-155208412:-|nuORF'] 63298 14045 LLSSRGRT True PC9_epitope_Rep4 888.51411368268 888.5130099358599 61.934 2 -0.9985410978960292 0.3066599206454877 1.0 ['ENST00000368408.3_1_1:155059141-155059444:+|nuORF'] 22754 4809 ETVELQISLR True NCI_RA007_Epitope_Rep4 1186.65575210558 1186.65409490379 24.933 3 -0.9985761389157823 0.30667838312829526 1.0 ['ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 69063 13940 LTQPQLHSL True PC9_epitope_Rep1 1035.57129420563 1035.57018993586 58.456 2 -0.9985802889251917 0.30667838312829526 1.0 ['ENST00000382948.9_1_18:47802317-47803521:-|nuORF', 'ENST00000586118.5_1_18:47802317-47803521:-|nuORF', 'MBD1|p.R86Qfs*99|1|0.38|ENSG00000141644|chr18:50276967-50276967|C/-|frameshift_variant'] 82626 5013 PQILSQLSP True H1975_Epitope_Rep2 981.54949613189 981.54838993586 24.365 2 -0.9986070352875759 0.3066876140009852 1.0 ['NR1H3|p.P204S|1|0.53|ENSG00000025434|chr11:47261351-47261351|C/T|missense_variant'] 91938 24517 RKMRMRWKRRR True NCI_RA007_Epitope_Rep5 1658.9674396291396 1658.96634993586 101.78 2 -0.9987408449929254 0.3067593295256354 1.0 ['GPIHBP1|p.A3Rfs*77|1|0.18|ENSG00000277494|chr8:143213273-143213273|G/-|frameshift_variant'] 38397 13196 HELVKHEE True PC9_epitope_Rep1 1019.5036085686299 1019.50250993586 55.622 2 -0.9987428594763645 0.3067593295256354 1.0 ['nc|ENSG00000033011|Q9BT22-2|ALG1', 'ENSG00000033011|ENST00000262374|ALG1', 'ENST00000450217.2_1_11:3427793-3430002:+|nuORF', 'ENST00000482834.1_1_3:155761946-155762456:-|nuORF', 'ENSG00000251287|ENST00000425059|ALG1L2'] 69078 19541 LTQVLDKSL True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 80.217 2 -0.9987518388473803 0.30677778813254697 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.L2931Wfs*101|1|0.21|ENSG00000086570|chr5:151542336-151542336|G/-|frameshift_variant', 'FAT2|p.E2578Dfs*50|1|0.03|ENSG00000086570|chr5:151543393-151543394|-/TAACCCAG|frameshift_variant'] 125014 10216 VIANDRAYKLK True NCI_RA007_Epitope_Rep2 1289.7455701694896 1289.74446993586 44.327 2 -0.9987628618118751 0.30677778813254697 1.0 ['ENSG00000047648|ENST00000337414|ARHGAP6', 'nc|ENSG00000047648|O43182-3|ARHGAP6', 'nc|ENSG00000047648|O43182-2|ARHGAP6', 'nc|ENSG00000047648|O43182-4|ARHGAP6', 'nc|ENSG00000047648|O43182-5|ARHGAP6', 'ENST00000489330.6_1_X:11166772-11683098:-|nuORF'] 48078 16233 IYMVLKCVYF True PC9_epitope_Rep5 1277.65522415373 1277.65357490379 67.429 3 -0.9987753673237466 0.3067870170673909 1.0 ['ENST00000262304.8_1_16:2139174-2139312:-|nuORF'] 20732 5848 EQERRRWQQRD True NCI_RA007_Epitope_Rep1 1585.7821834435697 1585.78054490379 26.799 3 -0.9988387852925525 0.3067880772661315 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 83802 16861 PVLGEGVPI True PC9_epitope_Rep2 879.5065686907499 879.50546993586 70.103 2 -0.9988398422974698 0.3067880772661315 1.0 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 17166 20232 EGRKRWKRK True NCI_RA007_Epitope_Rep5 1242.7421565548996 1242.74050490379 84.763 3 -0.9988519361749513 0.3067880772661315 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 80832 17008 PHPSPFSRFPS True NCI_RA007_Epitope_Rep5 1254.61455599994 1254.6129149037902 72.183 3 -0.9989099403272635 0.30679730557256585 1.0 ['ENSG00000213462|ENST00000394323|ERV3-1'] 112604 18003 TLERWYVAP True PC9_epitope_Rep1 1133.58694426977 1133.58584993586 74.042 2 -0.9989467346874588 0.30681984584459326 1.0 ['ENSG00000136881|ENST00000259407|BAAT'] 107107 21778 SVHKRIHNRWI True NCI_RA007_Epitope_Rep2 1444.81638412432 1444.8152899358602 90.263 2 -0.9989988352531134 0.3068516127314599 1.0 ['ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF', 'nc|ENSG00000167785|Q96NG5-2|ZNF558'] 104488 6807 SQLSYYYMGFY True NCI_RA007_Epitope_Rep4 1420.6009396514 1420.5998499358602 32.808 2 -0.9990044429660322 0.3068516127314599 1.0 ['nc|ENSG00000107669|O95260-2|ATE1', 'ENSG00000107669|ENST00000224652|ATE1'] 36483 11615 GVGHVDFNTLK True NCI_RA007_Epitope_Rep2 1185.61422164677 1185.6131299358601 49.771 2 -0.9990436799110136 0.3068618968386023 1.0 ['MATN2|p.Q198H|1|0.35|ENSG00000132561|chr8:97931404-97931404|G/T|missense_variant'] 74664 20508 NGNGHEHC True NCI_RA007_Epitope_Rep5 866.3089485967 866.30784993586 85.828 2 -0.9990713842102886 0.3068618968386023 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 84532 20339 QAQRKELRLP True H1975_Epitope_Rep2 1237.7255034312498 1237.7244099358602 84.285 2 -0.999087464484684 0.3068618968386023 1.0 ['nc|ENSG00000162852|Q6PJW8-2|CNST', 'ENSG00000162852|ENST00000366513|CNST'] 44396 3957 ILFRYFNKVVN True H1975_Epitope_Rep1 1411.79760574235 1411.79596490379 19.976 3 -0.9990947156273504 0.3068618968386023 1.0 ['nc|ENSG00000165115|Q86VH2-3|KIF27', 'nc|ENSG00000165115|Q86VH2-2|KIF27', 'ENSG00000165115|ENST00000297814|KIF27', 'ENST00000422653.1_1_9:88385240-88401019:+|nuORF'] 45395 9313 IQELKFDEK True NCI_RA007_Epitope_Rep1 1148.607739284 1148.60664993586 40.22 2 -0.9991636165234767 0.30688443415062694 1.0 ['ENSG00000119946|ENST00000356713|CNNM1', 'nc|ENSG00000119946|Q9NRU3-2|CNNM1'] 113106 15028 TLNWRRREMVR True PC9_epitope_Rep1 1515.82048352859 1515.81883490379 62.625 3 -0.9991890505252032 0.3068936600689499 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5', 'ENSG00000130449|ENST00000252744|ZSWIM6'] 88744 18117 QTLSKLIDYIY True PC9_epitope_Rep2 1355.7336680731098 1355.73256993586 74.988 2 -0.99924234430889 0.3069428175913108 1.0 ['nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF'] 63202 23316 LLRYMVKQL True PC9_epitope_Rep1 1162.6896355165 1162.68799490379 94.475 3 -0.9992535073978241 0.3069520424869225 1.0 ['ENSG00000123360|ENST00000243052|PDE1B'] 67504 7310 LSTDLHTIK True H1975_Epitope_Rep3 1026.57095985246 1026.5698699358602 33.09 2 -0.9994287852906155 0.3070943697590843 1.0 ['ENSG00000151693|ENST00000281419|ASAP2', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ASAP2|p.N309Tfs*27|1|0.46|ENSG00000151693|chr2:9344605-9344605|G/-|frameshift_variant'] 80420 23722 PGKKRHERL True PC9_epitope_Rep3 1119.66250925187 1119.66140993586 96.532 2 -0.999476894148266 0.30711690247700685 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2'] 141856 15582 YVDNNRSNW True H1975_Epitope_Rep2 1166.5104848542198 1166.5088249037901 65.092 3 -0.9995607412581783 0.3071793643187989 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 85647 8344 QGLRSLHVL True PC9_epitope_Rep2 1021.60326304025 1021.60216993586 37.465 2 -0.9995775624574834 0.30720189530565795 1.0 ['CON__Q9TRI1'] 17884 8477 EHWEKWEDVKR True PC9_epitope_Rep1 1540.7422756941999 1540.7406449037899 37.441 3 -0.9996064722713786 0.30722442569276226 1.0 ['nc|ENSG00000204904|Q5VT33|LINC01545'] 75786 17504 NLMDKSHC True NCI_RA007_Epitope_Rep4 946.4000721002201 946.39896993586 75.778 2 -0.9996523247134108 0.30724695548013575 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 115281 6712 TRENDPVL True PC9_epitope_Rep4 942.4770594676198 942.47596993586 33.004 2 -0.9996952535982293 0.30731863130015835 1.0 ['SPINK5|p.N755Mfs*27|1|0.19|ENSG00000133710|chr5:148119004-148119004|A/-|frameshift_variant', 'nc|ENSG00000133710|Q9NQ38-2|SPINK5', 'ENSG00000133710|ENST00000256084|SPINK5', 'nc|ENSG00000133710|Q9NQ38-3|SPINK5'] 84949 21930 QEEKERKLQEL True H1975_Epitope_Rep1 1428.7572570519999 1428.75616993586 91.216 2 -0.9997041695011121 0.30731863130015835 1.0 ['ENSG00000023892|ENST00000316637|DEF6'] 72166 19481 MGDDCNCPCDM True NCI_RA007_Epitope_Rep4 1202.31707294586 1202.31596993586 84.2 2 -0.999781103233306 0.3073544677792861 1.0 ['ENST00000431629.5_2_7:114654517-114655986:+|nuORF', 'ENSG00000135272|ENST00000393486|MDFIC', 'nc|ENSG00000135272|Q9P1T7-1|MDFIC'] 67133 10672 LSQMETKLKN True H1975_Epitope_Rep1 1190.6329084860197 1190.63180993586 46.008 2 -0.9997904545572576 0.3073595954218792 1.0 ['ENSG00000118898|ENST00000345988|PPL', 'ENST00000589090.1_1_16:4938789-4940274:-|nuORF'] 94578 23848 RRRYLRRKER True PC9_epitope_Rep2 1487.9021794369498 1487.90108993586 97.201 2 -0.9998086970368335 0.3073595954218792 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 142611 18174 YYMEHHGQL True PC9_epitope_Rep1 1176.50222866964 1176.50112993586 74.696 2 -0.999845353843261 0.30738212161137063 1.0 ['nc|ENSG00000179295|Q06124-3|PTPN11', 'ENSG00000179295|ENST00000351677|PTPN11', 'nc|ENSG00000179295|Q06124-1|PTPN11'] 101173 18147 SLGTGCPV True NCI_RA007_Epitope_Rep2 732.3476255212 732.3470749679301 75.347 1 -0.9998503940442326 0.30739237474216513 1.0 ['nc|ENSG00000285231|A0A2R8YFM6|OOSP3'] 65709 8249 LSAVVDLNGRY True NCI_RA007_Epitope_Rep1 1205.6404363946099 1205.6393299358601 36.086 2 -0.9998576292161638 0.30739237474216513 1.0 ['ENST00000465906.5_1_10:6157393-6157516:+|nuORF'] 83833 22910 PVLRCRQFT True PC9_epitope_Rep5 1118.60188314126 1118.6007899358601 93.116 2 -0.9998648452209236 0.30739237474216513 1.0 ['ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000472061.1_1_7:99754715-99755074:-|nuORF'] 102763 16523 SNFWAQAVF True PC9_epitope_Rep2 1068.5028802926397 1068.5017899358602 68.796 2 -0.9998799565929414 0.30739237474216513 1.0 ['nc|ENSG00000182504|Q8IW35-2|CEP97'] 24509 16723 FAEVNDDYITW True NCI_RA007_Epitope_Rep2 1371.5982967991097 1371.5971899358601 69.78 2 -0.9998951250405442 0.3074015915684135 1.0 ['TGM6|p.A397D|1|0.16|ENSG00000166948|chr20:2403677-2403677|C/A|missense_variant'] 81478 9385 PLGGPSPDP True H1975_Epitope_Rep2 835.40758292547 835.40703496793 41.062 1 -0.9999379197386872 0.30743742265160284 1.0 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'ENST00000415496.5_1_16:4738687-4738906:+|nuORF'] 137533 12395 YEEHLQAKK True PC9_epitope_Rep3 1144.58767254576 1144.58656993586 52.707 2 -1.000123722590737 0.3075930164475435 1.0 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF'] 86993 9773 QLYYYKHYL True PC9_epitope_Rep5 1289.6444591458899 1289.64280490379 42.564 3 -1.0001725555692216 0.3076022302359313 1.0 ['ENST00000490134.1_1_9:108337313-108359001:+|nuORF', 'nc|ENSG00000106692|O75072-2|FKTN', 'ENSG00000106692|ENST00000357998|FKTN'] 112229 21224 TKLRALKCRQ True PC9_epitope_Rep6 1215.72339525627 1215.72175490379 94.485 3 -1.0002336413397572 0.30763805721889553 1.0 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462'] 1071 6236 AEAHYKGHK True NCI_RA007_Epitope_Rep2 1039.5199273391097 1039.5188299358601 28.864 2 -1.000245671346512 0.307647270162739 1.0 ['nc|ENSG00000187595|Q66K41|ZNF385C', 'ENSG00000187595|ENST00000692273|ZNF385C'] 122247 14328 VGARESLSL True PC9_epitope_Rep5 930.51344497634 930.51234993586 60.113 2 -1.0002985480851554 0.30771073115561176 1.0 ['ENST00000413670.2_1_1:98510427-98510946:-|nuORF', 'ENST00000602984.1_1_1:98510427-98511708:-|nuORF'] 21961 4967 ESEFIDSQRV True H1975_Epitope_Rep3 1208.567331024 1208.56622993586 24.234 2 -1.0003065528141113 0.30771073115561176 1.0 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF'] 136080 24679 WRKVLLKG True NCI_RA007_Epitope_Rep2 998.6389202729798 998.6378299358599 103.75 2 -1.0003139107317647 0.30771073115561176 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 121396 6598 VEVSGDPELQP True NCI_RA007_Epitope_Rep2 1168.5611830143998 1168.56008993586 30.273 2 -1.0003193409070037 0.30771073115561176 1.0 ['chr7:97966977-97969770|493|23.45|0.0|21.16|-|2|None,CCZ1P1|2'] 137334 16173 YDIWHRRHDYW True NCI_RA007_Epitope_Rep2 1645.75384343741 1645.75274993586 67.637 2 -1.0003475329067708 0.30771584815785624 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 107440 14621 SVLSCVRSL True PC9_epitope_Rep5 962.52190148506 962.52080993586 61.24 2 -1.0003525228338583 0.30771584815785624 1.0 ['ENSG00000197993|ENST00000355265|KEL'] 138927 25356 YKKKINPIK True PC9_epitope_Rep3 1130.7175645164998 1130.71646993586 102.95 2 -1.0004614115285926 0.30777418539363216 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 101636 8096 SLLRLGTLH True NCI_RA007_Epitope_Rep3 1008.6080140675199 1008.60690993586 38.944 2 -1.000505529193055 0.30777418539363216 1.0 ['ENST00000475975.5_1_22:30758047-30767232:+|nuORF', 'ENSG00000187860|ENST00000338306|CCDC157'] 136682 3014 WWWLGSRRW True NCI_RA007_Epitope_Rep1 1331.6675946323098 1331.66593490379 15.591 3 -1.0005363255408242 0.30782331027142096 1.0 ['nc|ENSG00000171867|F7VJQ1|PRNP'] 36782 4980 GVKYHRCVK True NCI_RA007_Epitope_Rep4 1088.59131845756 1088.5902299358602 25.63 2 -1.000554741374921 0.3078243284594814 1.0 ['ENSG00000161551|ENST00000638348|ZNF577'] 105852 10804 SSLSAPRSYTP True H1975_Epitope_Rep2 1164.5775017848798 1164.57640993586 46.586 2 -1.000555786863051 0.3078243284594814 1.0 ['ENST00000529639.5_1_11:64889239-64889627:-|nuORF'] 104574 16073 SQQSSLLTV True PC9_epitope_Rep2 961.5080252427299 961.5074749679301 67.081 1 -1.0005724392982343 0.3078243284594814 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 36409 6287 GVFLYEML True PC9_epitope_Rep5 970.4833907180199 970.48228993586 29.159 2 -1.000652936056216 0.3078468415730935 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant', 'ENSG00000134318|ENST00000315872|ROCK2'] 63921 19194 LNRCRMHAI True PC9_epitope_Rep5 1112.56953746716 1112.5684299358602 78.869 2 -1.0007736534086569 0.307954288451049 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 48963 9344 KEERDDIPAQ True PC9_epitope_Rep6 1199.5782300608698 1199.57712993586 46.126 2 -1.0008025506710105 0.307954288451049 1.0 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 81122 14877 PKGAGAGGG True NCI_RA007_Epitope_Rep3 670.3398377188199 670.3392849679301 65.95 1 -1.0008054833443238 0.307954288451049 1.0 ['nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1'] 98669 14433 SGDFSCGG True NCI_RA007_Epitope_Rep5 728.2435543754799 728.24300496793 62.198 1 -1.0008755437798327 0.30797679863771815 1.0 ['LDLR-SMARCA4|3|fusion', 'LDLR-SMARCA4|4|fusion', 'nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'LDLR-SMARCA4|1|fusion', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'ENST00000557958.1_1_19:11200206-11213497:+|nuORF'] 65601 6158 LRWFQHRRNRR True NCI_RA007_Epitope_Rep5 1623.9083274465497 1623.90613987172 30.365 4 -1.0009326593408197 0.30801261158190213 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 135800 10391 WNDNEMYLF True H1975_Epitope_Rep3 1230.5015599633 1230.4999049037901 45.026 3 -1.0009466036159336 0.3080218172143142 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 30631 16874 GAKKKKKKKK True PC9_epitope_Rep2 1170.8288463009796 1170.82720490379 70.153 3 -1.0009653847698095 0.30802692491885275 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 89951 17340 RDDFYEWE True NCI_RA007_Epitope_Rep3 1158.4618033263 1158.46015490379 76.094 3 -1.0009764105491337 0.30802692491885275 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1'] 122369 17539 VGDKKKRS True H1975_Epitope_Rep2 916.54541381096 916.54430993586 72.767 2 -1.001057818836218 0.30805863729480937 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2'] 12298 4690 DINKNLWEKM True PC9_epitope_Rep1 1289.64380752289 1289.64217490379 22.912 3 -1.0010592131212852 0.30805863729480937 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 70575 8358 LWFHFKRYRY True NCI_RA007_Epitope_Rep2 1514.7935234214199 1514.79187490379 37.151 3 -1.0011287343240691 0.30813435317592286 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 119725 6049 VAWDREKRL True NCI_RA007_Epitope_Rep3 1171.6461904813898 1171.64455490379 30.773 3 -1.0012011280236677 0.30817936336911556 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 65087 15939 LQLRWQEYREL True H1975_Epitope_Rep1 1532.8099613312 1532.80886993586 66.62 2 -1.0012099036077229 0.30817936336911556 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 30804 16748 GANRKFPTLL True PC9_epitope_Rep5 1115.64512785223 1115.64402993586 69.427 2 -1.001239552075415 0.30820186756763945 1.0 ['ENST00000530083.1_1_11:777645-783680:+|nuORF'] 100747 15062 SLDYYNTCEYP True PC9_epitope_Rep5 1366.53873331766 1366.5376299358602 62.943 2 -1.0012511374907933 0.3082243711674803 1.0 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 4984 10191 ALGYHFLRHNK True PC9_epitope_Rep2 1354.7258377844198 1354.72474993586 44.536 2 -1.0012700189685162 0.30822947287213526 1.0 ['UVSSA|p.E432Rfs*152|1|0.28|ENSG00000163945|chr4:1375368-1375368|G/-|frameshift_variant', 'ENSG00000163945|ENST00000389851|UVSSA'] 119097 14614 VAGRLSVTL True PC9_epitope_Rep2 914.5549158655 914.55380993586 61.482 2 -1.001276327126129 0.30822947287213526 1.0 ['ENSG00000169951|ENST00000395091|ZNF764', 'nc|ENSG00000169951|Q96H86|ZNF764'] 81534 25375 PLIFLFLCK True PC9_epitope_Rep2 1092.64056006576 1092.63997496793 103.28 1 -1.0013503860722677 0.30828877716596176 1.0 ['nc|ENSG00000196335|Q9BXU1-3|STK31', 'nc|ENSG00000196335|Q9BXU1-2|STK31', 'ENSG00000196335|ENST00000355870|STK31'] 35541 11160 GSTSLRSALRR True NCI_RA007_Epitope_Rep5 1202.68436689526 1202.6832699358602 49.563 2 -1.001355818340463 0.30828877716596176 1.0 ['nc|ENSG00000140798|Q96J65-4|ABCC12'] 119514 10159 VASFADVGW True H1975_Epitope_Rep3 950.4497820906199 950.44868993586 44.119 2 -1.001359373003384 0.30828877716596176 1.0 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF'] 11243 10884 DEELGGSSRVP True PC9_epitope_Rep5 1144.53603089572 1144.5349299358602 46.852 2 -1.0013597948993331 0.30828877716596176 1.0 ['ENSG00000236104|ENST00000431845|ZBTB22'] 128460 12067 VPSESLPIT True H1975_Epitope_Rep2 941.50696261357 941.50641496793 51.499 1 -1.0013633317635848 0.30828877716596176 1.0 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 132647 13382 VVFVPEPC True NCI_RA007_Epitope_Rep4 888.4415259060398 888.44042993586 58.646 2 -1.0014109411299295 0.3083112772154761 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 38609 10013 HFDQLVAA True PC9_epitope_Rep6 899.4501164437899 899.44900993586 49.082 2 -1.0014667479299473 0.30834297570123287 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 14691 15306 DVILVESQDPP True PC9_epitope_Rep5 1210.60813320682 1210.60702993586 63.884 2 -1.001490801647678 0.30834297570123287 1.0 ['ENSG00000174460|ENST00000310164|ZCCHC12'] 131360 19433 VTGSWMRGP True PC9_epitope_Rep1 989.4752856458099 989.47418993586 79.562 2 -1.0015147098125257 0.30836547413219845 1.0 ['ENST00000397389.6_1_12:123463939-123464260:+|nuORF'] 25185 60 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 0.34754 2 -1.0015629706114662 0.3083797693934276 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 84739 15914 QDSKMDYKRRF True NCI_RA007_Epitope_Rep1 1472.7194320746396 1472.71832993586 66.003 2 -1.0015870003877319 0.3083797693934276 1.0 ['ENSG00000166398|ENST00000299505|GARRE1'] 12269 5606 DIKWDFTP True PC9_epitope_Rep2 1020.4916469025999 1020.49054993586 26.95 2 -1.0015890167745485 0.3083797693934276 1.0 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 31062 16651 GATLPRVRAS True NCI_RA007_Epitope_Rep5 1026.5934266325398 1026.59232993586 70.814 2 -1.0016105048237045 0.30838896720483017 1.0 ['ENST00000332281.5_1_16:88744440-88744848:-|nuORF'] 105815 7841 SSKYPEDDPDY True H1975_Epitope_Rep2 1314.5251914285 1314.52354490379 35.11 3 -1.0016848635638897 0.3084472578328635 1.0 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 133262 3888 VVTLVMDCL True PC9_epitope_Rep5 991.50822556687 991.50712993586 20.033 2 -1.0016911625935279 0.3084472578328635 1.0 ['ENST00000570586.1_1_17:53799978-53800014:-|nuORF', 'ENST00000424486.2_2_17:53798468-53800203:-|nuORF'] 133250 1780 VVTKEKLLLE True PC9_epitope_Rep1 1170.72237511342 1170.72073490379 9.8028 3 -1.0017181659322534 0.308456454379829 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 40943 12359 HSTSPAHKYYL True PC9_epitope_Rep4 1302.63568536734 1302.63458993586 55.345 2 -1.0017269405322093 0.308465650682199 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1'] 60364 6528 LGSVQHLK True NCI_RA007_Epitope_Rep2 880.5130510535199 880.51194993586 30.004 2 -1.0017707124874444 0.30847484673998327 1.0 ['ENSG00000165029|ENST00000374736|ABCA1'] 122335 8252 VGDAARQGLRR True NCI_RA007_Epitope_Rep4 1197.6690511842899 1197.6673949037902 38.54 3 -1.0017993811279446 0.3085372340425532 1.0 ['ENST00000482171.5_1_2:130910130-130912221:-|nuORF', 'nc|ENSG00000136699|Q9NXE4-5|SMPD4'] 132025 9762 VTSSSIRLSW True PC9_epitope_Rep1 1134.6033226099 1134.60166490379 42.408 3 -1.0018107086684427 0.3085607148555928 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000479501.5_1_20:61926459-61943880:+|nuORF'] 134923 16311 VYWEGIDEP True PC9_epitope_Rep2 1106.4920408254197 1106.49094993586 67.986 2 -1.0018108926706917 0.3085607148555928 1.0 ['ENSG00000124253|ENST00000319441|PCK1', 'nc|ENSG00000124253|P35558-2|PCK1'] 81948 17455 PLSTLPRMAP True PC9_epitope_Rep2 1081.5954007784899 1081.59430993586 72.392 2 -1.0018188391904361 0.3085607148555928 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'ENST00000475684.2_1_6:31124506-31125946:-|nuORF'] 7692 14475 ASLQALPPAGG True PC9_epitope_Rep4 980.5290950404798 980.52798993586 63.589 2 -1.0018217548515107 0.3085607148555928 1.0 ['ENST00000372638.3_1_1:41327017-41327251:-|nuORF'] 129860 23433 VRRRRRGELA True PC9_epitope_Rep4 1267.7697682850699 1267.76812490379 98.423 3 -1.0018468116104258 0.30862309686855927 1.0 ['ENST00000400198.7_2_13:107220308-107220443:-|nuORF'] 84681 9146 QDKNIFEHTYF True H1975_Epitope_Rep1 1440.66737941844 1440.66628993586 40.086 2 -1.001882652868567 0.3086373790022338 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 64739 12003 LPYATESK True PC9_epitope_Rep1 907.46509780159 907.46400993586 51.032 2 -1.0018974813520831 0.3086373790022338 1.0 ['nc|ENSG00000077942|P23142-2|FBLN1', 'nc|ENSG00000077942|P23142-3|FBLN1', 'nc|ENSG00000077942|P23142-4|FBLN1', 'ENSG00000077942|ENST00000327858|FBLN1'] 102885 4670 SPAKNKTTA True PC9_epitope_Rep3 916.4977949122 916.49668993586 23.058 2 -1.001897629082883 0.3086373790022338 1.0 ['ENST00000330843.8_1_8:37730107-37730260:-|nuORF'] 74612 13607 NGGSFTGP True PC9_epitope_Rep1 735.3187679210699 735.3182149679301 57.195 1 -1.0019126597728019 0.3086465715539364 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 113379 15927 TLRWVRKTPWY True H1975_Epitope_Rep1 1504.8303028529597 1504.82920993586 66.574 2 -1.0019316451244331 0.30865576386118865 1.0 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 98670 14555 SGDFSCGG True NCI_RA007_Epitope_Rep5 728.2435543754799 728.24300496793 62.658 1 -1.0019551143812857 0.30866085199170346 1.0 ['LDLR-SMARCA4|3|fusion', 'LDLR-SMARCA4|4|fusion', 'nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'LDLR-SMARCA4|1|fusion', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'ENST00000557958.1_1_19:11200206-11213497:+|nuORF'] 22820 4956 EVAAVAVLMC True PC9_epitope_Rep6 1004.5034745395999 1004.50236993586 26.635 2 -1.0019586301530352 0.30866085199170346 1.0 ['SLC10A4|p.L173M|1|0.14|ENSG00000145248|chr4:48484078-48484078|C/A|missense_variant'] 75567 21217 NLCRHNLSV True PC9_epitope_Rep5 1054.53419750426 1054.53310993586 86.659 2 -1.0019971029982846 0.30868333931634157 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF', 'ENST00000295746.12_1_3:108298530-108300316:-|nuORF'] 141553 18275 YTNFTLEKNF True PC9_epitope_Rep3 1275.6135529404298 1275.61244993586 75.501 2 -1.0020230547803284 0.3086925306458904 1.0 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 30009 16364 FYAGTQPPVI True PC9_epitope_Rep5 1091.56514619603 1091.56404993586 67.943 2 -1.0020492821978912 0.3087017217310377 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 44521 23558 ILLRRSET True PC9_epitope_Rep3 986.58727862294 986.58618993586 95.898 2 -1.0020810151179977 0.3087159988300673 1.0 ['ENST00000371933.7_1_1:47184091-47184325:-|nuORF'] 138923 25006 YKKKINPIK True NCI_RA007_Epitope_Rep5 1130.7175645164998 1130.71646993586 103.69 2 -1.002085906305296 0.3087159988300673 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 133308 24579 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63703496793 103.03 1 -1.0020974436583985 0.3087159988300673 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 22679 7948 ETQLLLEVP True NCI_RA007_Epitope_Rep2 1040.57537652656 1040.57426993586 35.547 2 -1.0021566249970528 0.3087517781411611 1.0 ['ENSG00000186891|ENST00000379268|TNFRSF18'] 45394 8695 IQEHNEYYQYL True H1975_Epitope_Rep3 1498.6728587217 1498.67176993586 38.445 2 -1.0021955893871892 0.30879674558966247 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 58352 5043 LENEKRKYDEH True NCI_RA007_Epitope_Rep1 1459.70555583231 1459.70392490379 23.7 3 -1.002210387428035 0.30879674558966247 1.0 ['nc|ENSG00000186409|Q5VVM6-2|CCDC30', 'nc|ENSG00000186409|Q5VVM6|CCDC30', 'ENSG00000186409|ENST00000657597|CCDC30'] 17164 21822 EGRKRWKRK True H1975_Epitope_Rep2 1242.7421565548996 1242.74050490379 90.247 3 -1.0022245345946577 0.3088059344340751 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 36896 10185 GVLPGGHL True PC9_epitope_Rep3 748.42317341996 748.42206993586 44.129 2 -1.0022520049151429 0.308828416840594 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 68645 12231 LTIHNHLWQPK True NCI_RA007_Epitope_Rep2 1385.7568035595298 1385.75570993586 52.174 2 -1.002264980180311 0.30883760501967455 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 133306 25489 VVTVGVITVL True PC9_epitope_Rep2 998.6375828603 998.63703496793 103.72 1 -1.0022780697728637 0.30884679295446993 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 98655 7674 SGAPRWREA True H1975_Epitope_Rep2 1028.51517631184 1028.51406993586 34.47 2 -1.0023533864268326 0.3089224470262941 1.0 ['ENST00000358165.7_1_6:167352234-167370622:-|nuORF'] 88215 17407 QSAHLRLP True H1975_Epitope_Rep2 920.5191990631199 920.51810993586 72.248 2 -1.0024069697346225 0.308958219788108 1.0 ['ENST00000523752.5_1_8:22879516-22879924:-|nuORF'] 130873 8085 VTDAGLGS True H1975_Epitope_Rep3 718.34973369618 718.34918496793 36.073 1 -1.0024571447939732 0.30902976245862634 1.0 ['ENST00000506763.5_1_4:2243363-2243819:-|nuORF'] 102171 9620 SLRSTFSLP True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 41.858 2 -1.0025037934393581 0.30902976245862634 1.0 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 116377 4933 TTGMYHHAL True PC9_epitope_Rep4 1029.4702002653698 1029.4691099358602 25.574 2 -1.0025221684882835 0.30905223979795293 1.0 ['ENST00000531360.5_1_11:118992333-119002261:+|nuORF'] 135846 24561 WPFLMLLK True NCI_RA007_Epitope_Rep1 1046.5986952537799 1046.59758993586 101.74 2 -1.0025355679569226 0.3090665000731062 1.0 ['ENST00000221452.12_1_19:45541072-45541210:+|nuORF'] 133304 25678 VVTVGVITVL True PC9_epitope_Rep1 998.6375828603 998.63703496793 103.81 1 -1.0025478865778206 0.3090665000731062 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 44883 9970 INKNQVPPPS True H1975_Epitope_Rep1 1092.5927579261997 1092.5916699358602 43.286 2 -1.0025551611210777 0.3090665000731062 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 87234 5977 QPLGYPIYVSP True NCI_RA007_Epitope_Rep2 1232.64412479272 1232.6424749037901 27.858 3 -1.002616210530255 0.3091247424735828 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 92672 7504 RNPVKYSV True PC9_epitope_Rep2 961.5345147740899 961.53340993586 34.233 2 -1.0026295909724448 0.3091247424735828 1.0 ['nc|ENSG00000113361|P55285-2|CDH6', 'CDH6|p.V657Sfs*21|1|0.08|ENSG00000113361|chr5:31322904-31322904|G/-|frameshift_variant', 'ENSG00000113361|ENST00000265071|CDH6'] 65175 14861 LQQFKSPL True PC9_epitope_Rep5 959.5440168286299 959.54290993586 62.166 2 -1.0027916895663858 0.3092535488330055 1.0 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant'] 62441 18710 LLHPPPLSL True PC9_epitope_Rep1 985.59605240149 985.59494993586 76.757 2 -1.002799772548623 0.30926272977391445 1.0 ['ENST00000583260.1_1_17:62009328-62009508:-|nuORF'] 25567 5389 FEKKIDEK True NCI_RA007_Epitope_Rep3 1035.5600608155898 1035.5589699358602 28.206 2 -1.0028010876809446 0.30927191047077274 1.0 ['ENSG00000023330|ENST00000484952|ALAS1'] 101215 5012 SLHGGWPS True H1975_Epitope_Rep2 839.39260156767 839.39150993586 24.361 2 -1.0028696479805297 0.30931274172326256 1.0 ['ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 126111 8338 VLERRYSDFAK True H1975_Epitope_Rep1 1382.7306483813397 1382.7295499358602 37.003 2 -1.002899117177262 0.30931274172326256 1.0 ['ENSG00000167208|ENST00000330943|SNX20'] 112061 13166 TITHLLRTHL True H1975_Epitope_Rep1 1203.70879073795 1203.7076899358601 55.738 2 -1.002900648918789 0.30931274172326256 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5', 'ENST00000475300.1_1_10:45935943-45936950:+|nuORF'] 126424 23442 VLKKKRGHKRR True NCI_RA007_Epitope_Rep4 1404.9266032796397 1404.9249449037902 101.74 3 -1.0029107867486649 0.30931369943118386 1.0 ['KAT6B|p.R1135H|1|0.26|ENSG00000156650|chr10:75024989-75024989|G/A|missense_variant'] 125671 23237 VKLLLPAAP True PC9_epitope_Rep6 920.6058888091999 920.60478993586 102.48 2 -1.0029161162116471 0.30931369943118386 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000358849.8_1_7:150725553-150730697:+|nuORF', 'ENST00000297504.10_1_7:150725553-150728339:+|nuORF', 'ENST00000462605.5_1_7:150725553-150729984:+|nuORF', 'ENST00000461373.5_1_7:150725553-150725944:+|nuORF', 'ENST00000466514.5_1_7:150725553-150731828:+|nuORF'] 73087 12773 MREREREQRWR True NCI_RA007_Epitope_Rep2 1630.8222744337397 1630.82116993586 54.301 2 -1.0029190938156485 0.30931369943118386 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 72747 1644 MNMKKSHEVQA True NCI_RA007_Epitope_Rep1 1301.62202653249 1301.62039490379 8.695 3 -1.0029760497622564 0.30932287859658447 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 22215 8016 ESYKDRRRRAH True NCI_RA007_Epitope_Rep5 1472.77089048388 1472.76925490379 37.524 3 -1.0030151160015237 0.3093586370039603 1.0 ['nc|ENSG00000108788|Q9UH92|MLX', 'nc|ENSG00000108788|Q9UH92-2|MLX', 'ENSG00000108788|ENST00000435881|MLX', 'ENST00000585403.5_1_17:40719142-40721608:+|nuORF', 'ENST00000588320.1_1_17:40720799-40723580:+|nuORF', 'ENST00000590050.5_1_17:40719112-40721521:+|nuORF'] 48691 18964 KAYIIEQSP True PC9_epitope_Rep1 1047.5600608155898 1047.5589699358602 77.728 2 -1.0030761170327316 0.3093943944609087 1.0 ['ENSG00000203910|ENST00000370375|C1orf146'] 57838 16359 LEEVFHNL True PC9_epitope_Rep1 999.50254593947 999.50144993586 67.745 2 -1.003118286855091 0.30941686157771636 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 123164 23435 VGKTRQKVDRD True PC9_epitope_Rep4 1300.7211463267997 1300.72057496793 98.431 1 -1.003165511835049 0.30946179401993357 1.0 ['ENST00000541775.5_1_12:7270841-7271144:+|nuORF'] 116568 7872 TTWYHRHYWGE True PC9_epitope_Rep1 1534.6741961343798 1534.6730899358602 35.105 2 -1.0031749205907408 0.30946179401993357 1.0 ['nc|ENSG00000163518|Q96PJ5-2|FCRL4', 'ENSG00000163518|ENST00000271532|FCRL4'] 116778 9609 TVDRYQAP True PC9_epitope_Rep1 948.46649478392 948.46538993586 41.817 2 -1.0031945147845431 0.3094975482053395 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 114967 15170 TQWERPVSI True PC9_epitope_Rep3 1114.5771078620598 1114.5760099358602 63.495 2 -1.003312418503686 0.309573167490565 1.0 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 67614 8935 LSVLWCMSI True PC9_epitope_Rep3 1050.52420998418 1050.52310993586 39.318 2 -1.0034150973753322 0.30964878476605584 1.0 ['ENST00000527958.5_1_11:117041336-117041564:+|nuORF'] 101619 8100 SLLRDQDP True H1975_Epitope_Rep3 942.4770594676199 942.47596993586 36.13 2 -1.0034566042174322 0.30969782337151514 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF'] 112911 6848 TLLALSQALP True H1975_Epitope_Rep3 1025.6120963884498 1025.61098993586 31.298 2 -1.0034845871172091 0.30970699621287623 1.0 ['BGN|p.S9T|1|0.38|ENSG00000182492|chrX:153504656-153504656|T/A|missense_variant'] 135477 5281 WIFWLWWRACW True H1975_Epitope_Rep3 1651.79108089327 1651.78942490379 25.395 3 -1.0035318642777526 0.3097693207186138 1.0 ['SLC6A14|p.L565Ffs*2|1|0.13|ENSG00000268104|chrX:116457685-116457686|-/TT|frameshift_variant', 'ENSG00000268104|ENST00000598581|SLC6A14'] 14689 10228 DVILVESQDPP True H1975_Epitope_Rep3 1210.60813320682 1210.60702993586 44.389 2 -1.003591200318339 0.30981929311719375 1.0 ['ENSG00000174460|ENST00000310164|ZCCHC12'] 2621 4420 AERYYAWREE True NCI_RA007_Epitope_Rep2 1371.62076357919 1371.6191249037902 21.826 3 -1.0035928260573708 0.30981929311719375 1.0 ['ENSG00000189045|ENST00000601380|ANKDD1B'] 130508 5222 VSQEESHL True PC9_epitope_Rep5 927.42977492203 927.42866993586 25.103 2 -1.0036117518268053 0.30981929311719375 1.0 ['LY9|p.G408E|1|0.14|ENSG00000122224|chr1:160816744-160816744|G/A|missense_variant'] 131127 16545 VTEFYLLGFGA True PC9_epitope_Rep5 1215.6175756917098 1215.61646993586 68.643 2 -1.0036509065277295 0.30981929311719375 1.0 ['ENSG00000181273|ENST00000326855|OR5AK2'] 73515 4303 MVKKLPPVLL True PC9_epitope_Rep1 1136.7355230797598 1136.7344299358601 21.442 2 -1.0036753548651391 0.3098417507075378 1.0 ['nc|ENSG00000125775|Q9H190-3|SDCBP2', 'ENSG00000125775|ENST00000360779|SDCBP2'] 92882 11906 RPFQRIRWWLY True PC9_epitope_Rep5 1619.8837354081497 1619.8820849037902 50.793 3 -1.0037405515252558 0.3098559736394558 1.0 ['OR4S2|p.H241Tfs*40|1|0.3|ENSG00000174982|chr11:55651622-55651622|C/-|frameshift_variant'] 19927 15428 ELVEWVLEEV True PC9_epitope_Rep1 1243.63361967867 1243.63252993586 64.162 2 -1.0037642042530301 0.3098559736394558 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF'] 140625 14614 YRRRLWKWWK True H1975_Epitope_Rep1 1576.8891551417598 1576.8880499358602 61.423 2 -1.0037679848645151 0.3098559736394558 1.0 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 105876 7367 SSPGPPVQP True H1975_Epitope_Rep2 864.43413202648 864.43302993586 33.277 2 -1.0037850617011634 0.30987842954892714 1.0 ['ENST00000524751.5_1_11:126143220-126144854:+|nuORF'] 142924 9963 YYYLFAFIYGL True PC9_epitope_Rep5 1431.7114760765498 1431.70984490379 43.298 3 -1.0038476307078008 0.3098875986501209 1.0 ['ENSG00000253710|ENST00000521508|ALG11'] 138554 4597 YIAWRRRGD True H1975_Epitope_Rep3 1191.62612374315 1191.62502993586 22.804 2 -1.0039521850666946 0.3099416758559301 1.0 ['ENST00000377811.3_1_X:47004102-47004276:-|nuORF'] 84840 10880 QEAKRQHQSDC True H1975_Epitope_Rep3 1328.58914618108 1328.58804993586 46.932 2 -1.00396137001447 0.3099416758559301 1.0 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 84057 7614 PVWDYSHLM True PC9_epitope_Rep4 1146.51681610462 1146.51517490379 36.668 3 -1.0039722416716261 0.3099416758559301 1.0 ['ENSG00000157502|ENST00000357175|PWWP3B'] 66352 8527 LSGEDKREHRG True H1975_Epitope_Rep1 1282.6378106256598 1282.6367099358602 37.727 2 -1.0041058624995678 0.30999070014614055 1.0 ['nc|ENSG00000141161|Q8IWX7-2|UNC45B', 'ENSG00000141161|ENST00000394570|UNC45B', 'nc|ENSG00000141161|Q8IWX7|UNC45B'] 56825 5144 LDNNLDSV True PC9_epitope_Rep6 888.41887588516 888.41776993586 27.509 2 -1.0041390292548802 0.3099957487511957 1.0 ['ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000162923|Q9H7D7-2|WDR26', 'nc|ENSG00000162923|Q9H7D7|WDR26', 'ENST00000486652.5_1_1:224601027-224612368:-|nuORF', 'ENST00000443112.6_1_1:224601027-224621705:-|nuORF'] 2767 6499 AETPTAPAP True H1975_Epitope_Rep3 853.4181476091699 853.4175949679301 29.968 1 -1.0041619429180113 0.3099957487511957 1.0 ['nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 112114 6599 TIWFYKESYLR True NCI_RA007_Epitope_Rep2 1504.77145056416 1504.76980490379 30.277 3 -1.0041920699635773 0.3100049154411276 1.0 ['ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 131376 10140 VTGYLVERK True PC9_epitope_Rep5 1063.6025943339098 1063.6014899358602 43.988 2 -1.0042633423417606 0.31004065148656906 1.0 ['ENSG00000086967|ENST00000357701|MYBPC2'] 77416 4357 NSKLHASSV True PC9_epitope_Rep4 941.49304388493 941.49194993586 23.202 2 -1.0043258030412592 0.3100763865825307 1.0 ['ENSG00000173572|ENST00000342929|NLRP13'] 73516 4119 MVKKLPPVLL True PC9_epitope_Rep3 1136.7355230797598 1136.7344299358601 20.965 2 -1.0043431843603357 0.3100988362824805 1.0 ['nc|ENSG00000125775|Q9H190-3|SDCBP2', 'ENSG00000125775|ENST00000360779|SDCBP2'] 43793 14367 IHPSFILSSF True PC9_epitope_Rep3 1146.60734536118 1146.60568490379 60.355 3 -1.0043971868317196 0.31014373389303646 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|355|3|anti-sense'] 56568 10097 LDGSKRRRLT True NCI_RA007_Epitope_Rep5 1200.7051023398399 1200.70400993586 45.473 2 -1.0044044019666967 0.31014373389303646 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF', 'ENST00000541061.1_1_4:110897303-110898417:+|nuORF'] 5112 17903 ALLKGSSS True H1975_Epitope_Rep1 761.4283183700501 761.4277649679301 74.561 1 -1.0044315816747391 0.31016618180369027 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 3356 14291 AGGRHFTHLL True PC9_epitope_Rep4 1107.5937609857099 1107.5926699358602 62.87 2 -1.0044613213043108 0.31018862911795964 1.0 ['ENST00000492337.5_1_3:181328318-181328423:+|nuORF'] 46890 14898 ITLLRHYRNPW True H1975_Epitope_Rep1 1467.80990176155 1467.8088099358602 62.542 2 -1.0044878394779027 0.3102028346373019 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130', 'nc|ENSG00000136715|Q9H0E3-2|SAP130'] 141736 7610 YTWRWVWSWEW True PC9_epitope_Rep3 1683.7622828627896 1683.76063490379 34.269 3 -1.004501829243185 0.3102028346373019 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 65974 15577 LSDVQKLNL True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 72.126 2 -1.0045031802114501 0.3102028346373019 1.0 ['LRRC30|p.E72D|1|0.14|ENSG00000206422|chr18:7231354-7231354|G/C|missense_variant'] 135565 9221 WKVKLPPQK True NCI_RA007_Epitope_Rep1 1122.6913497686598 1122.68971490379 39.867 3 -1.0046117403746226 0.3103049784814835 1.0 ['nc|ENSG00000143409|Q8N5J2-2|MINDY1', 'nc|ENSG00000143409|Q8N5J2-4|MINDY1', 'ENSG00000143409|ENST00000683666|MINDY1', 'nc|ENSG00000143409|Q8N5J2-3|MINDY1'] 56983 15985 LDREELDHYI True PC9_epitope_Rep5 1301.62518025329 1301.62354490379 66.477 3 -1.0046347764786199 0.31031413960284254 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'ENST00000398792.3_1_10:73483820-73501738:+|nuORF'] 79337 9587 PARPPTPAQV True PC9_epitope_Rep5 1032.5716285587998 1032.5705299358601 41.837 2 -1.0047342901869325 0.310402996573068 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2'] 124606 10096 VGVVRKYL True PC9_epitope_Rep6 932.5807366905199 932.5801849679301 49.44 1 -1.0047469659191426 0.310412156149136 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 9380 15003 AVSLLVGG True NCI_RA007_Epitope_Rep2 714.42759009406 714.4270449679301 63.042 1 -1.0047971782578555 0.3104744447986399 1.0 ['ENSG00000100263|ENST00000216085|RHBDD3'] 45451 5846 IQKFFLMF True PC9_epitope_Rep3 1072.5779598092 1072.57686993586 27.553 2 -1.0048093959921645 0.3104836031824038 1.0 ['ENST00000326361.7_2_3:179051926-179052001:+|nuORF'] 120870 19289 VEMQRDVL True PC9_epitope_Rep1 988.5011660404799 988.50006993586 78.998 2 -1.0048131668783375 0.31049276132288484 1.0 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 9295 19444 AVQINELDK True PC9_epitope_Rep3 1028.5502244078798 1028.54912993586 80.017 2 -1.0048764757927207 0.3105284828199918 1.0 ['ENSG00000198087|ENST00000359314|CD2AP', 'ENST00000463175.1_1_6:47544277-47547315:+|nuORF'] 116403 16766 TTIPRCSPV True PC9_epitope_Rep5 972.50625142092 972.50514993586 69.495 2 -1.004933582528527 0.3105642033682197 1.0 ['ENST00000504445.1_1_4:47514609-47514774:+|nuORF'] 82539 21152 PPSASGVF True PC9_epitope_Rep2 760.3755545212 760.37444993586 86.814 2 -1.0049849666860151 0.31058664152046006 1.0 ['GCM1|p.Y288F|1|0.38|ENSG00000137270|chr6:53128654-53128654|T/A|missense_variant'] 33958 8406 GLSLASGQKL True PC9_epitope_Rep2 972.56039516876 972.55928993586 37.705 2 -1.0052403046495917 0.31072448369745664 1.0 ['nc|ENSG00000268235|B4DZS4-2|TCP11X1'] 100900 15905 SLEVHLSTHTV True PC9_epitope_Rep5 1221.63535101417 1221.63424993586 66.169 2 -1.0052444170943888 0.31072448369745664 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384'] 102496 17356 SLVKRAKRK True H1975_Epitope_Rep3 1084.7192958519997 1084.71877496793 72.415 1 -1.0052648768869643 0.3107427918774984 1.0 ['ENST00000484846.1_1_11:64622876-64622915:-|nuORF'] 111645 14627 TIDVKELK True PC9_epitope_Rep3 944.5542471591599 944.55314993586 61.394 2 -1.0052735832042532 0.3107427918774984 1.0 ['ENSG00000147400|ENST00000370277|CETN2'] 56596 10378 LDHLFFHYE True H1975_Epitope_Rep1 1219.56620882519 1219.5651099358602 44.868 2 -1.0053133438686197 0.31078765986268075 1.0 ['ENSG00000160703|ENST00000409109|NLRX1', 'ENST00000481860.6_1_11:119043673-119051967:+|nuORF', 'nc|ENSG00000160703|Q86UT6-2|NLRX1'] 113663 15052 TLWGRRTAIP True PC9_epitope_Rep1 1169.66692592597 1169.66582993586 62.715 2 -1.0053446815242946 0.31078765986268075 1.0 ['ENST00000463515.1_1_10:103338648-103338876:-|nuORF'] 46341 14691 ISQYHSKGKEP True PC9_epitope_Rep2 1272.6462500510397 1272.6451499358602 61.773 2 -1.0053937812455427 0.31081009296148737 1.0 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44'] 82441 6179 PPPPGEGF True NCI_RA007_Epitope_Rep5 796.3755545211999 796.37444993586 30.446 2 -1.0054241151957306 0.31081924542834755 1.0 ['ENST00000562735.5_1_16:2198645-2198768:+|nuORF'] 78118 15651 NWLYCWLY True H1975_Epitope_Rep3 1159.51608782863 1159.51498993586 65.618 2 -1.0055535100805109 0.31086410899964145 1.0 ['ENST00000473576.6_1_13:50235206-50237234:-|nuORF', 'ENSG00000123179|ENST00000242827|EBPL', 'ENST00000378270.5_1_13:50235106-50265589:-|nuORF'] 81072 6532 PISEDTSKL True PC9_epitope_Rep4 988.50769088956 988.50658993586 32.25 2 -1.0055883315000143 0.31086410899964145 1.0 ['TMCO4|p.G568E|1|0.14|ENSG00000162542|chr1:19683242-19683242|C/T|missense_variant'] 53129 17079 KPTSTYSL True PC9_epitope_Rep3 895.46509780159 895.46400993586 70.846 2 -1.0056299446432335 0.3108865398916392 1.0 ['ENST00000553691.5_1_14:77907431-77919723:-|nuORF', 'ENSG00000151445|ENST00000557658|VIPAS39'] 129349 14517 VRAGAGGVGLG True NCI_RA007_Epitope_Rep4 912.5141136826799 912.5130099358599 63.205 2 -1.0056885632332002 0.31091812073407166 1.0 ['ENST00000496700.5_1_14:105953068-105953266:+|nuORF'] 96810 8754 SAQTHFAA True PC9_epitope_Rep3 831.3875161872298 831.38640993586 38.625 2 -1.0057193419069048 0.31091812073407166 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 44963 12129 IPAFAPTPVP True H1975_Epitope_Rep1 1008.5644179200399 1008.56332993586 51.67 2 -1.0058112147861114 0.31092727103722095 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 66022 7780 LSEELAIQLD True PC9_epitope_Rep2 1129.5866694862498 1129.5855699358601 35.298 2 -1.0058600326477347 0.31095059154705157 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 52797 3275 KNQDDDDDDD True PC9_epitope_Rep2 1193.39563381093 1193.39398490379 17.852 3 -1.0058809148906496 0.31095059154705157 1.0 ['nc|ENSG00000133114|Q8IXQ4-4|GPALPP1', 'ENSG00000133114|ENST00000379151|GPALPP1'] 79961 8690 PETKECPPP True H1975_Epitope_Rep3 996.4586325221599 996.45752993586 38.425 2 -1.0058841966784042 0.31095059154705157 1.0 ['ENSG00000170190|ENST00000329783|SLC16A5', 'nc|ENSG00000170190|O15375-2|SLC16A5'] 22560 11026 ETKEQFQEAVP True H1975_Epitope_Rep3 1304.6248459001197 1304.6237499358601 47.5 2 -1.0058892947046076 0.31095059154705157 1.0 ['ENSG00000176402|ENST00000312891|GJC3'] 134497 12691 VYQEWLEK True NCI_RA007_Epitope_Rep5 1093.5444107514497 1093.5433099358602 55.477 2 -1.0060466881685188 0.3110618352741227 1.0 ['ENSG00000164114|ENST00000311277|MAP9'] 60457 16843 LGVWLYAVAW True NCI_RA007_Epitope_Rep4 1176.6331661861998 1176.63206993586 72.981 2 -1.0060497209666823 0.3110618352741227 1.0 ['OPN4|p.L199V|1|0.09|ENSG00000122375|chr10:86658654-86658654|C/G|missense_variant'] 27158 14361 FLLDEQNV True H1975_Epitope_Rep2 976.48656152216 976.48546993586 60.39 2 -1.0061587294566494 0.3110892771788199 1.0 ['CUX2|p.S617L|1|0.19|ENSG00000111249|chr12:111310632-111310632|C/T|missense_variant'] 18758 7261 ELCKYFLCQEY True H1975_Epitope_Rep1 1437.63085988069 1437.6297699358602 32.939 2 -1.0061678163420984 0.3110892771788199 1.0 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant'] 70820 5925 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1442.6356288295895 1442.6345299358602 27.656 2 -1.006186968963199 0.3110892771788199 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 58295 10977 LELWVNYYVRW True H1975_Epitope_Rep1 1539.7874349814701 1539.78632993586 47.188 2 -1.0062353930852626 0.3111117012095543 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 50114 19972 KKKKEEKSKDK True NCI_RA007_Epitope_Rep2 1374.81946338574 1374.8178149037901 82.687 3 -1.0062908521672176 0.3111432706222865 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 79421 6849 PATPTGAAAP True PC9_epitope_Rep5 852.4341320264798 852.4335849679301 31.315 1 -1.006317063736533 0.3111432706222865 1.0 ['ARMCX2|p.G281Rfs*23|1|0.13|ENSG00000184867|chrX:101656748-101656749|-/T|frameshift_variant', 'ENSG00000184867|ENST00000356824|ARMCX2'] 88522 18675 QTADEEEDQPL True PC9_epitope_Rep1 1273.5310050849298 1273.5293549037901 76.623 3 -1.0063510740069095 0.3111748383584923 1.0 ['ENSG00000155886|ENST00000341998|SLC24A2', 'nc|ENSG00000155886|Q9UI40-2|SLC24A2'] 119919 9113 VDLHVISNDVC True NCI_RA007_Epitope_Rep1 1212.58087291316 1212.5797699358602 39.449 2 -1.0063535652402649 0.3111748383584923 1.0 ['nc|ENSG00000142515|P07288-3|KLK3', 'nc|ENSG00000142515|P07288-5|KLK3', 'nc|ENSG00000142515|P07288-2|KLK3', 'ENSG00000142515|ENST00000326003|KLK3'] 83965 19702 PVRVVRNVKGG True NCI_RA007_Epitope_Rep2 1179.7200241279897 1179.7189299358602 81.587 2 -1.0063679108959336 0.3111839834311357 1.0 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF'] 30877 8414 GAPQQFPYPP True H1975_Epitope_Rep3 1100.52909504048 1100.5279899358602 37.348 2 -1.0064425542328692 0.3112462328903522 1.0 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 84603 6633 QDANENKTV True PC9_epitope_Rep3 1017.47270236317 1017.47160993586 30.537 2 -1.0064977909167854 0.3112512446067043 1.0 ['CON__Q28107'] 47465 7606 IVPAQEVP True H1975_Epitope_Rep3 851.47526856247 851.47416993586 34.238 2 -1.0065091206799546 0.3112512446067043 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 107672 11571 SVQSPSTPL True PC9_epitope_Rep4 914.4709114580199 914.46980993586 52.267 2 -1.006593391409897 0.31131349069378433 1.0 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF'] 42283 12229 IDTYLLHMEK True PC9_epitope_Rep1 1261.63765951329 1261.63656993586 51.898 2 -1.0066150390151036 0.3113143676406165 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6'] 43397 13529 IGEHYVHVN True PC9_epitope_Rep5 1066.5195929859399 1066.51848993586 57.061 2 -1.0066419048984336 0.3113143676406165 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'KIF5B-MET|1|fusion'] 30087 9412 FYIYRLYWWEF True NCI_RA007_Epitope_Rep2 1684.8078360728798 1684.8067299358602 41.221 2 -1.0066440847655191 0.3113143676406165 1.0 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 104434 16270 SQLIVHKGVHT True H1975_Epitope_Rep3 1217.6880552933699 1217.6869499358602 68.044 2 -1.0066593992152244 0.3113459266437456 1.0 ['ZNF268|p.K778Sfs*18|1|0.36|ENSG00000090612|chr12:133204016-133204016|A/-|frameshift_variant', 'ENSG00000090612|ENST00000536435|ZNF268', 'nc|ENSG00000090612|Q14587-2|ZNF268', 'ENST00000536899.6_1_12:133758152-133781113:+|nuORF'] 20645 6950 EPYDPEKKWDK True H1975_Epitope_Rep3 1433.68269512941 1433.68158993586 31.695 2 -1.006662862513609 0.3113459266437456 1.0 ['ENSG00000071859|ENST00000393600|FAM50A'] 19043 23461 ELFISGDELMN True NCI_RA007_Epitope_Rep5 1266.5802042068196 1266.57856490379 97.547 3 -1.0067495507113569 0.3113550682312961 1.0 ['ENSG00000130338|ENST00000367097|TULP4'] 72086 18059 MEWCIWLMY True PC9_epitope_Rep5 1273.53339476889 1273.53175490379 74.477 3 -1.0068313028212181 0.3113642095761486 1.0 ['ENST00000446859.5_1_3:169514113-169514143:-|nuORF'] 72273 640 MHYPELKLPY True H1975_Epitope_Rep2 1289.64783027417 1289.64619490379 3.4752 3 -1.0068833176121343 0.31136921749518814 1.0 ['ENST00000290541.6_1_1:151374297-151374348:+|nuORF'] 63477 14342 LLWMLLLVP True PC9_epitope_Rep1 1096.67186019404 1096.67076993586 59.99 2 -1.0069363831866271 0.31136921749518814 1.0 ['ENSG00000188501|ENST00000695545|LCTL'] 81257 4454 PKPSFFDFEGK True H1975_Epitope_Rep3 1297.6342883850095 1297.6331899358602 22.256 2 -1.0069704035107085 0.3113783582882022 1.0 ['ENSG00000230124|ENST00000367595|ACBD6'] 28228 5422 FRINCCLLQK True NCI_RA007_Epitope_Rep4 1236.6471190815198 1236.64602993586 27.431 2 -1.0070214063909897 0.3113874988385521 1.0 ['ENST00000477239.1_1_20:23350773-23351022:+|nuORF'] 67464 8242 LSSSAGNSAP True PC9_epitope_Rep2 889.41412485789 889.41302993586 37.059 2 -1.0070407544267466 0.311392505873452 1.0 ['ENSG00000112561|ENST00000373033|TFEB'] 126395 3626 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 20.016 3 -1.007041760459214 0.311392505873452 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 33800 10955 GLLKQGLPPA True PC9_epitope_Rep5 992.6018660579198 992.60076993586 47.128 2 -1.0071377594470516 0.3114199251413554 1.0 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'ENST00000576723.5_1_17:7843028-7852016:+|nuORF'] 33109 10208 GIQWSHTG True PC9_epitope_Rep5 884.4140652882401 884.41296993586 44.254 2 -1.0072193023952323 0.3114199251413554 1.0 ['ENST00000561209.1_1_15:85801832-85803322:-|nuORF'] 30632 17057 GAKKKKKKKK True PC9_epitope_Rep2 1170.8288463009796 1170.82720490379 70.861 3 -1.0072421056529293 0.3114199251413554 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 16225 12648 EEENQENLDWV True H1975_Epitope_Rep2 1403.58410328695 1403.5830099358602 53.75 2 -1.0072653401416243 0.31142906441208873 1.0 ['nc|ENSG00000145014|Q2T9K0-4|TMEM44', 'ENSG00000145014|ENST00000347147|TMEM44', 'nc|ENSG00000145014|Q2T9K0-7|TMEM44', 'nc|ENSG00000145014|Q2T9K0-6|TMEM44', 'nc|ENSG00000145014|Q2T9K0|TMEM44'] 110577 17019 TFRPLVDSV True PC9_epitope_Rep4 1032.56039516876 1032.55928993586 73.457 2 -1.0073090901068973 0.3114514758972181 1.0 ['ENSG00000101350|ENST00000375712|KIF3B'] 62249 8775 LLFGFAAG True H1975_Epitope_Rep3 794.4326754744998 794.43156993586 38.76 2 -1.0073242944457377 0.3114738867874444 1.0 ['ENST00000550566.6_1_12:112846864-112847275:-|nuORF'] 14934 10596 DYEATRLEGLP True NCI_RA007_Epitope_Rep2 1262.6142812164198 1262.6131899358602 45.815 2 -1.0073975916099083 0.311521312171559 1.0 ['nc|ENSG00000102103|O60828-8|PQBP1', 'nc|ENSG00000102103|O60828-10|PQBP1', 'nc|ENSG00000102103|O60828-9|PQBP1', 'ENST00000486150.5_1_X:48755780-48758817:+|nuORF', 'nc|ENSG00000102103|O60828-7|PQBP1', 'nc|ENSG00000102103|O60828-6|PQBP1', 'ENST00000470062.5_1_X:48755362-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-5|PQBP1', 'nc|ENSG00000102103|O60828-4|PQBP1', 'ENST00000472742.5_1_X:48755271-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-3|PQBP1', 'nc|ENSG00000102103|O60828-2|PQBP1', 'ENSG00000102103|ENST00000447146|PQBP1'] 31102 8084 GAVGPDAVL True PC9_epitope_Rep3 797.42831837005 797.4272299358599 36.07 2 -1.0074337399264084 0.311521312171559 1.0 ['PCDHA4|p.A692V|1|0.36|ENSG00000204967|chr5:140809262-140809262|C/T|missense_variant'] 43998 11626 IIFLPSKEP True PC9_epitope_Rep1 1042.60628273202 1042.6051899358602 49.597 2 -1.0074518689348593 0.311521312171559 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 62257 20602 LLFKHMCY True PC9_epitope_Rep2 1053.51397965365 1053.5128899358601 84.679 2 -1.0074526963638644 0.311521312171559 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 57277 6716 LDYRLSWHLWE True PC9_epitope_Rep1 1516.7462984454799 1516.7446649037902 30.636 3 -1.00750864935845 0.311521312171559 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98'] 59092 12975 LEWVNSLQ True PC9_epitope_Rep3 987.5025459394699 987.50144993586 54.936 2 -1.0075208041594532 0.311521312171559 1.0 ['ENSG00000181852|ENST00000345093|RNF41', 'nc|ENSG00000181852|Q9H4P4-2|RNF41'] 129057 6930 VQNSFYKLSPP True NCI_RA007_Epitope_Rep1 1278.6608374860198 1278.6597499358602 30.96 2 -1.0075527364215617 0.311521312171559 1.0 ['ENSG00000165066|ENST00000518699|NKX6-3'] 92843 24067 RPDLLCQRR True H1975_Epitope_Rep2 1155.6294948714299 1155.62785490379 99.102 3 -1.007570890397358 0.311521312171559 1.0 ['ENST00000583283.1_1_17:61904916-61905045:+|nuORF'] 13372 4548 DLWVAVFQK True NCI_RA007_Epitope_Rep3 1104.59678067748 1104.59568993586 24.759 2 -1.007607995197173 0.311521312171559 1.0 ['TRAPPC6A|p.M106Nfs*32|1|0.9|ENSG00000007255|chr19:45164201-45164202|-/T|frameshift_variant', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENST00000587818.1_1_19:45668074-45681461:-|nuORF'] 66459 17591 LSGSLFGSPVL True PC9_epitope_Rep6 1075.59136094387 1075.59026993586 80.306 2 -1.0076092934514218 0.311521312171559 1.0 ['ZNF521|p.R543L|1|0.14|ENSG00000198795|chr18:25226290-25226290|C/A|missense_variant'] 127510 9867 VNLRSRNGW True NCI_RA007_Epitope_Rep5 1100.583924578 1100.5828299358602 44.599 2 -1.007622285346651 0.311521312171559 1.0 ['nc|ENSG00000057294|Q99959|PKP2'] 60480 9370 LGYMYYVFLQ True PC9_epitope_Rep6 1295.62603220043 1295.62438490379 46.234 3 -1.0076490889879535 0.3115221804960257 1.0 ['nc|ENSG00000184307|Q8IYP9|ZDHHC23', 'ENSG00000184307|ENST00000638807|ZDHHC23'] 19440 10720 ELNGQRGLVP True PC9_epitope_Rep1 1081.58800689893 1081.5869099358601 46.123 2 -1.007655419653655 0.3115221804960257 1.0 ['nc|ENSG00000005379|O95153-2|TSPOAP1', 'ENSG00000005379|ENST00000343736|TSPOAP1', 'nc|ENSG00000005379|O95153-3|TSPOAP1'] 69126 14974 LTRLCRWDK True PC9_epitope_Rep2 1189.63899692597 1189.6378899358601 62.854 2 -1.0076580502760641 0.3115221804960257 1.0 ['ENSG00000154143|ENST00000284288|PANX3'] 74287 4036 NEKRKYDEVRK True NCI_RA007_Epitope_Rep2 1463.78447485935 1463.78336993586 20.337 2 -1.007741679340479 0.3115976645435244 1.0 ['ENST00000514642.1_1_1:43002254-43055163:+|nuORF'] 96809 8206 SAQTHFAA True PC9_epitope_Rep2 831.3875161872298 831.38640993586 36.923 2 -1.0078856776634642 0.31168641605074243 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 49162 18916 KELEPQLTILY True H1975_Epitope_Rep1 1345.74931813725 1345.74822993586 78.874 2 -1.007902019507539 0.31169141355837743 1.0 ['ENST00000434942.1_1_22:32664397-32665363:+|nuORF'] 13718 18171 DPVIRKLAK True PC9_epitope_Rep6 1038.6549642599398 1038.65386993586 82.536 2 -1.0079075223741234 0.31169141355837743 1.0 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 77647 7564 NTFYQRLK True NCI_RA007_Epitope_Rep1 1068.5716285587998 1068.5705299358601 33.414 2 -1.0079625724203174 0.31172708454965237 1.0 ['ENSG00000079257|ENST00000264265|LXN'] 62456 16385 LLHTQDVL True PC9_epitope_Rep3 937.5232813840499 937.52218993586 68.163 2 -1.0080752836494389 0.31175448140432815 1.0 ['ENST00000488375.2_2_17:16220949-16229209:+|nuORF', 'ENSG00000108474|ENST00000225609|PIGL'] 116616 19589 TVAERLFSL True PC9_epitope_Rep2 1034.5760452328998 1034.57494993586 80.732 2 -1.00808604055002 0.31175448140432815 1.0 ['MCOLN2|p.C455R|1|0.05|ENSG00000153898|chr1:84931541-84931541|A/G|missense_variant'] 69910 7203 LVIRDAQREDE True NCI_RA007_Epitope_Rep2 1342.6840921117398 1342.6829899358602 32.638 2 -1.0081159135501512 0.31175448140432815 1.0 ['nc|ENSG00000161643|A6NMB1|SIGLEC16', 'SIGLEC11|p.L421Cfs*102|1|0.1|ENSG00000161640|chr19:49958745-49958746|-/GACCCCGGGCA|frameshift_variant', 'nc|ENSG00000161640|Q96RL6-2|SIGLEC11', 'ENSG00000161640|ENST00000447370|SIGLEC11'] 95061 23594 RTSVTRRRSRS True PC9_epitope_Rep2 1360.77597586432 1360.77433490379 96.224 3 -1.0081258631862633 0.3117768814350918 1.0 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 47841 15747 IYHGVPVV True PC9_epitope_Rep6 882.49633836022 882.49524993586 72.799 2 -1.008182177055119 0.31179514395648134 1.0 ['ENSG00000174607|ENST00000310836|UGT8'] 126947 10799 VLRIKFTEE True NCI_RA007_Epitope_Rep4 1133.6444591458899 1133.64280490379 48.385 3 -1.0081858607277967 0.31179514395648134 1.0 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA'] 628 10747 AASLHMENN True PC9_epitope_Rep5 985.4287293762101 985.42762993586 46.33 2 -1.0082686086765802 0.3118532080878841 1.0 ['SLITRK1|p.V85A|1|0.18|ENSG00000178235|chr13:83881254-83881254|A/G|missense_variant'] 113578 8341 TLVDKFEDNLR True NCI_RA007_Epitope_Rep4 1348.6986795467199 1348.6970249037902 38.899 3 -1.0082734792400072 0.3118532080878841 1.0 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171225816-171400468:+|nuORF'] 133111 4070 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 20.775 2 -1.0082993889189278 0.31187560532286096 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 113244 10596 TLQWDTDP True PC9_epitope_Rep2 974.4345259492999 974.43342993586 46.073 2 -1.0083192275736956 0.3118847347891846 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1'] 87676 8712 QQTYDMWLKK True H1975_Epitope_Rep1 1339.6594575870297 1339.65836993586 38.438 2 -1.0084262306101446 0.31192039800995025 1.0 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 15142 4548 EAADPWWQRQQ True H1975_Epitope_Rep3 1413.64256165293 1413.64090490379 22.614 3 -1.008502755459742 0.31197431611345483 1.0 ['nc|ENSG00000143851|P35236-3|PTPN7'] 121941 16026 VFSPDQFQRL True PC9_epitope_Rep4 1235.6298717109098 1235.62822490379 69.576 3 -1.0085147710390354 0.31197431611345483 1.0 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 25941 19509 FFTVIFQWLKV True PC9_epitope_Rep4 1426.80129414046 1426.80018993586 83.161 2 -1.008521599967423 0.31197431611345483 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 56204 8961 LAYVLGDP True PC9_epitope_Rep3 846.4487194614599 846.44762993586 39.416 2 -1.0085393141462236 0.31198344366468117 1.0 ['ENSG00000173890|ENST00000355897|GPR160'] 66997 8609 LSPKVKAPSA True PC9_epitope_Rep5 996.5967806774798 996.59568993586 38.058 2 -1.008556961211012 0.3119884320982741 1.0 ['ENSG00000122035|ENST00000241463|RASL11A'] 116565 15030 TTWGDQDFL True PC9_epitope_Rep3 1081.47163973401 1081.4705499358602 62.94 2 -1.0085730182254635 0.3119884320982741 1.0 ['nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4', 'nc|ENSG00000037280|P35916-3|FLT4'] 121313 6289 VETVSIVW True NCI_RA007_Epitope_Rep2 931.5014833103099 931.50038993586 29.069 2 -1.0085925546975427 0.31199755909898913 1.0 ['KCNA4|p.C378S|1|0.37|ENSG00000182255|chr11:30011546-30011546|C/G|missense_variant'] 123762 17689 VGRIHRHL True NCI_RA007_Epitope_Rep5 986.5886160356199 986.5880649679301 74.822 1 -1.008601713967258 0.3120199514479392 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'ENST00000511348.1_1_4:100870420-100870579:-|nuORF'] 631 7914 AASPAGPPAPR True PC9_epitope_Rep1 990.5246783663799 990.52358993586 35.267 2 -1.008662091115736 0.31206887403162475 1.0 ['ENSG00000131398|ENST00000477616|KCNC3'] 101255 11835 SLHVPPETLG True PC9_epitope_Rep4 1048.5553097883198 1048.5542099358602 53.295 2 -1.0087205775854566 0.31210038999283685 1.0 ['ENSG00000150048|ENST00000315330|CLEC1A'] 22175 6027 ESTAIHWASS True PC9_epitope_Rep3 1087.4934378077498 1087.4923499358601 28.235 2 -1.0087678490194325 0.31210038999283685 1.0 ['ANKRD1|p.R195S|1|0.08|ENSG00000148677|chr10:90916239-90916239|G/T|missense_variant'] 61290 19059 LIPSGTYMEV True PC9_epitope_Rep2 1108.54744752656 1108.54634993586 78.676 2 -1.008797519330217 0.31210537486072054 1.0 ['IL1RAPL2|p.D459V|1|0.11|ENSG00000189108|chrX:105766976-105766976|A/T|missense_variant'] 39456 7837 HLARHGGP True PC9_epitope_Rep1 843.4463684760299 843.44526993586 34.971 2 -1.0088087034223316 0.31210537486072054 1.0 ['ENST00000562866.1_1_16:89783858-89784437:+|nuORF'] 94688 20130 RRYRRNFNYRR True H1975_Epitope_Rep3 1655.8981566856696 1655.8970499358602 84.22 2 -1.0088152852962586 0.31211449946278635 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 61183 14174 LILELLQHKK True NCI_RA007_Epitope_Rep4 1233.7808930490498 1233.77923490379 61.8 3 -1.0088283001506213 0.31211948375800824 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 138922 23729 YKKKINPIK True NCI_RA007_Epitope_Rep4 1130.7175645164998 1130.71646993586 102.89 2 -1.0088391283976454 0.31211948375800824 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense'] 100959 14876 SLFLLHLL True PC9_epitope_Rep5 954.5902387450601 954.58914993586 62.224 2 -1.0089595751619826 0.3121551358234295 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|89|1|anti-sense'] 45227 8504 IPTAVRQQLQK True NCI_RA007_Epitope_Rep4 1280.75646920636 1280.75536993586 39.511 2 -1.0089947533039079 0.3121601188423482 1.0 ['RTTN|p.R1200P|1|0.47|ENSG00000176225|chr18:70114529-70114529|C/G|missense_variant'] 88395 19267 QSLKGLRNRAS True NCI_RA007_Epitope_Rep5 1228.7000169594 1228.6983749037902 80.975 3 -1.0089966702097226 0.3121601188423482 1.0 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16', 'nc|ENSG00000172349|Q14005-3|IL16', 'nc|ENSG00000172349|Q14005-4|IL16'] 68401 11086 LTESRACDAP True PC9_epitope_Rep1 1061.4811588718899 1061.48006993586 47.53 2 -1.0090867608539484 0.31216924199217455 1.0 ['THSD7B|p.G962Afs*7|1|0.25|ENSG00000144229|chr2:137411797-137411797|G/-|frameshift_variant', 'THSD7B|p.V1334Sfs*28|1|0.25|ENSG00000144229|chr2:137655548-137655548|G/-|frameshift_variant', 'ENSG00000144229|ENST00000409968|THSD7B'] 128614 5662 VPTYSKEEKD True PC9_epitope_Rep1 1194.5768330785397 1194.57517490379 26.601 3 -1.0091224893055992 0.3121916282030877 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|37|1|sense'] 12360 13420 DIRSFFVPQP True H1975_Epitope_Rep3 1204.6240580544797 1204.62296993586 56.89 2 -1.0091806247266644 0.3122015915119363 1.0 ['ENST00000403017.2_1_2:135957914-136028945:-|nuORF', 'nc|ENSG00000121988|Q5FWF4-3|ZRANB3', 'ENSG00000121988|ENST00000264159|ZRANB3'] 20664 12555 EQAQQIRLQAE True H1975_Epitope_Rep3 1312.6735274280397 1312.67242993586 53.492 2 -1.009185986865202 0.3122015915119363 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 133251 836 VVTKEKLLLE True PC9_epitope_Rep2 1170.72237511342 1170.72073490379 4.7466 3 -1.0092073247249642 0.3122015915119363 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 101435 7882 SLKRSTIEL True NCI_RA007_Epitope_Rep5 1045.61315901761 1045.61206993586 37.013 2 -1.0092120285142736 0.3122015915119363 1.0 ['ENST00000508743.1_1_17:46969858-46986323:-|nuORF'] 83228 6399 PSVQHLGEV True PC9_epitope_Rep2 964.4977949121999 964.49668993586 30.021 2 -1.009324039650607 0.31227702550364056 1.0 ['ENST00000592869.1_1_17:74152379-74154596:-|nuORF'] 72651 7823 MLYLESSV True PC9_epitope_Rep5 940.457569893 940.45646993586 35.035 2 -1.0094318495387153 0.31233505298197684 1.0 ['ENST00000355680.7_1_21:48084242-48084341:+|nuORF'] 44238 14266 IKMTHRHSP True H1975_Epitope_Rep3 1105.5814820498501 1105.58038993586 60.216 2 -1.0094597473546205 0.31233505298197684 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 133110 3883 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 20.033 2 -1.0095514321506383 0.3124237440984563 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 112643 10180 TLFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep1 1081.5113966504398 1081.51028993586 44.097 2 -1.0095917847066593 0.31245524228841204 1.0 ['CON__P02769'] 53439 228 KREERPENKK True PC9_epitope_Rep5 1312.7211463267997 1312.72004993586 1.2729 2 -1.0095988478747693 0.31245524228841204 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 31972 13818 GEQAIRQIL True PC9_epitope_Rep4 1026.5821932425 1026.58108993586 61.047 2 -1.0096191984466905 0.3124776214409803 1.0 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 67132 5873 LSQLWQNR True NCI_RA007_Epitope_Rep3 1043.55122746739 1043.55012993586 30.079 2 -1.0097725116010199 0.3125845378597003 1.0 ['ENSG00000066135|ENST00000372396|KDM4A', 'nc|ENSG00000066135|O75164-2|KDM4A'] 80505 2628 PGNREGFLWK True NCI_RA007_Epitope_Rep4 1202.6196413803798 1202.61854993586 14.731 2 -1.0097824651871325 0.3125845378597003 1.0 ['nc|ENSG00000184060|Q9NPF8-2|ADAP2', 'ENSG00000184060|ENST00000330889|ADAP2'] 78574 13489 NYQVNTLSI True PC9_epitope_Rep4 1050.5345743437401 1050.53346993586 59.782 2 -1.0097882442153618 0.3125845378597003 1.0 ['ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 43876 8305 IHSTTTTP True PC9_epitope_Rep2 856.4290466460401 856.4279499358599 37.309 2 -1.0099192048913805 0.31265995677023245 1.0 ['ENSG00000120685|ENST00000352251|PROSER1', 'nc|ENSG00000120685|Q86XN7-2|PROSER1'] 25428 16168 FEDRVLAL True PC9_epitope_Rep3 961.5232813840498 961.52218993586 67.331 2 -1.0099375528210044 0.31266907123534715 1.0 ['ENSG00000186648|ENST00000342740|CARMIL3'] 55985 8275 LASERAITV True NCI_RA007_Epitope_Rep4 958.5447451046199 958.54364993586 38.639 2 -1.0099575542696275 0.31267818545874054 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000471603.6_1_16:2152958-2153681:-|nuORF', 'ENST00000532739.1_1_16:16465196-16470832:+|nuORF', 'ENST00000415938.7_1_16:2152605-2162466:-|nuORF', 'ENST00000480227.5_1_16:2149506-2153780:-|nuORF', 'ENST00000483731.5_1_16:2153201-2162466:-|nuORF'] 41297 24385 HVSLPLHA True NCI_RA007_Epitope_Rep2 872.48683630568 872.48572993586 102.41 2 -1.010049240963562 0.3127453060358545 1.0 ['nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF', 'ENSG00000163867|ENST00000357182|ZMYM6'] 37684 13392 GVYHCKATNQK True PC9_epitope_Rep4 1247.6080907205098 1247.6069899358602 59.414 2 -1.0100507548509146 0.3127453060358545 1.0 ['ENSG00000102755|ENST00000282397|FLT1', 'FLT1|p.V842Ffs*19|1|0.26|ENSG00000102755|chr13:28334094-28334094|C/-|frameshift_variant'] 34962 22454 GQRLPVEDFSL True PC9_epitope_Rep3 1259.6510010783097 1259.64990993586 91.646 2 -1.0100511777430077 0.3127453060358545 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 66100 8321 LSEKQVKIWF True NCI_RA007_Epitope_Rep1 1276.71795843932 1276.7163149037901 36.367 3 -1.0101582420822353 0.3127767906865735 1.0 ['ENSG00000169840|ENST00000302945|GSX1', 'ENST00000507839.1_1_4:54965775-54968086:+|nuORF'] 55755 7328 LALSVSLGWAH True PC9_epitope_Rep2 1152.62914343492 1152.6274949037902 33.569 3 -1.0101771806150182 0.3127767906865735 1.0 ['ENST00000278070.6_1_10:103897616-103897673:+|nuORF'] 13621 18518 DPIVLLPCDLP True PC9_epitope_Rep6 1193.6365968841299 1193.63548993586 83.871 2 -1.0102236353990752 0.3127859027565998 1.0 ['ENSG00000176454|ENST00000314891|LPCAT4', 'ENST00000566581.5_1_15:34656349-34659376:-|nuORF'] 122654 12466 VGGAWVGG True H1975_Epitope_Rep3 701.3496741265299 701.34912496793 53.143 1 -1.0102841557623778 0.3128082736674622 1.0 ['OR4C6|p.H153N|1|0.43|ENSG00000181903|chr11:55665623-55665623|C/A|missense_variant', 'OR4C6|p.L196*|1|0.25|ENSG00000181903|chr11:55665752-55665752|T/-|frameshift_variant', 'ENSG00000181903|ENST00000314259|OR4C6'] 126851 16509 VLQALPAEP True PC9_epitope_Rep4 936.5280324113198 936.52692993586 71.472 2 -1.010301688950411 0.31281738507842644 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 17195 6626 EGSVFMETQML True NCI_RA007_Epitope_Rep2 1270.5573605872598 1270.5562699358602 30.384 2 -1.0103213808821656 0.31283975497865346 1.0 ['ENSG00000155115|ENST00000329970|GTF3C6'] 69788 7131 LVGCYMVIYLW True NCI_RA007_Epitope_Rep2 1358.6766878743 1358.6755899358602 32.36 2 -1.0103962477237716 0.3128538283062645 1.0 ['CDC14B|p.G145W|1|0.55|ENSG00000081377|chr9:96551860-96551860|C/A|missense_variant'] 123739 21682 VGRGQRHR True PC9_epitope_Rep4 964.5427284723598 964.54217496793 91.6 1 -1.0103983197963589 0.3128538283062645 1.0 ['ENST00000483133.1_7:100608813-100609843:+|nuORF'] 91499 6946 RHTFQYRVWHF True NCI_RA007_Epitope_Rep2 1575.78474964287 1575.78310490379 31.638 3 -1.0104291132510046 0.3128538283062645 1.0 ['nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 85142 7979 QELWIYQREWQ True NCI_RA007_Epitope_Rep1 1577.76267678561 1577.76156993586 35.029 2 -1.010487909221594 0.31287619653700316 1.0 ['nc|ENSG00000113812|Q9H981-3|ACTR8', 'nc|ENSG00000113812|Q9H981-2|ACTR8', 'ENSG00000113812|ENST00000335754|ACTR8'] 91315 15912 RGRGKGPA True NCI_RA007_Epitope_Rep4 797.4620185401699 797.46092993586 69.076 2 -1.0105875901015626 0.31289441586678685 1.0 ['ENSG00000117318|ENST00000374561|ID3'] 18728 7203 ELARAQEAL True H1975_Epitope_Rep3 999.53490869691 999.53380993586 32.681 2 -1.0106286974367515 0.31289441586678685 1.0 ['nc|ENSG00000130787|O75146-2|HIP1R', 'ENST00000452196.6_1_12:123320097-123341792:+|nuORF', 'ENST00000535831.5_1_12:123319379-123341792:+|nuORF', 'ENSG00000130787|ENST00000253083|HIP1R'] 4608 6880 AKWKDDVQLWL True PC9_epitope_Rep2 1400.7452358163198 1400.7436049037901 31.865 3 -1.0106327386794944 0.31289937690574043 1.0 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF', 'ENST00000579878.1_1_17:30219240-30228646:-|nuORF', 'ENST00000490218.6_1_17:30212004-30222015:-|nuORF'] 113510 20744 TLTGMQPLHTF True PC9_epitope_Rep1 1244.6223438023196 1244.62124993586 84.62 2 -1.0106386450189853 0.31289937690574043 1.0 ['ENSG00000146938|ENST00000381095|NLGN4X', 'nc|ENSG00000146938|Q8N0W4-2|NLGN4X'] 68853 7065 LTMGSGKG True PC9_epitope_Rep5 749.3741746222099 749.37306993586 32.143 2 -1.0106630543365818 0.3129084859010221 1.0 ['ENST00000531068.5_1_11:64949924-64950017:+|nuORF'] 12623 8623 DLANVTLTY True H1975_Epitope_Rep3 1008.5127762700001 1008.51166993586 38.162 2 -1.0106913246657396 0.3129092981944481 1.0 ['nc|ENSG00000105371|Q14773-2|ICAM4', 'nc|ENSG00000105371|Q14773|ICAM4'] 92607 13173 RMTTERDSL True PC9_epitope_Rep5 1107.5342570739099 1107.5331499358601 55.674 2 -1.0106941750933702 0.3129092981944481 1.0 ['ENSG00000135951|ENST00000393483|TSGA10', 'nc|ENSG00000135951|Q9BZW7-2|TSGA10', 'ENST00000478090.5_1_2:99689501-99743552:-|nuORF'] 117361 6727 TVPGPTLAPQ True NCI_RA007_Epitope_Rep1 979.5338460677499 979.53274993586 30.177 2 -1.0107235604402258 0.3129092981944481 1.0 ['ENSG00000078081|ENST00000265598|LAMP3'] 83769 13229 PVINNDNP True PC9_epitope_Rep5 881.42429561877 881.42318993586 55.893 2 -1.0107423335458485 0.31294491946709085 1.0 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'SP100|p.E361K|1|0.31|ENSG00000067066|chr2:230464090-230464090|G/A|missense_variant'] 784 25780 AAVVKRTG True NCI_RA007_Epitope_Rep5 800.48683630568 800.48628496793 106.7 1 -1.0107975066587382 0.31295483768342636 1.0 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000505447.5_1_4:7765494-7780765:-|nuORF'] 81026 4909 PIMLDEVQCTG True PC9_epitope_Rep3 1204.5467959035598 1204.54568993586 23.979 2 -1.0108183323952988 0.31295483768342636 1.0 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 103262 24415 SPLLLLLLVP True PC9_epitope_Rep1 1076.72091856144 1076.7198299358602 98.754 2 -1.0108198670342647 0.31295483768342636 1.0 ['ENSG00000050393|ENST00000379170|MCUR1', 'nc|ENSG00000050393|Q96AQ8-2|MCUR1'] 44793 9656 IMMFIGGP True PC9_epitope_Rep1 864.4237676669198 864.42266993586 41.998 2 -1.01084032194291 0.31295483768342636 1.0 ['nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 35741 21577 GTHALAHP True H1975_Epitope_Rep2 802.4085859849799 802.40748993586 89.272 2 -1.0109150177979633 0.31297720042417815 1.0 ['ENST00000505551.5_1_4:1838279-1843155:-|nuORF'] 11088 7444 DCDWRWDP True PC9_epitope_Rep1 1091.4130793120698 1091.4119899358602 33.449 2 -1.0109289413381184 0.3129995625720762 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 42326 6486 IEAEHKTV True NCI_RA007_Epitope_Rep2 925.48689587533 925.48578993586 29.838 2 -1.0110283444047847 0.31308820020678135 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 16243 10412 EEERVKQMHQ True H1975_Epitope_Rep1 1312.6193836802 1312.61828993586 45.001 2 -1.0110915046011324 0.31312381533077954 1.0 ['ENSG00000031691|ENST00000335783|CENPQ'] 55494 6354 LAGHQRVGR True NCI_RA007_Epitope_Rep5 992.5627952105998 992.56168993586 31.116 2 -1.0110999204653808 0.3131246189327466 1.0 ['ENST00000304494.9_2_9:21974788-21975004:-|nuORF'] 86913 19967 QLSQLQQEKH True PC9_epitope_Rep5 1237.64149902377 1237.6404099358601 81.854 2 -1.01111034624853 0.3131246189327466 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 5073 4679 ALLEARCHEM True PC9_epitope_Rep5 1171.5477989630701 1171.54615490379 23.051 3 -1.011160810299962 0.3131246189327466 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 21599 19525 ERQSAEVQGSL True PC9_epitope_Rep6 1202.5891290977397 1202.58802993586 87.766 2 -1.0113239212740261 0.31321324903574693 1.0 ['nc|ENSG00000099849|Q02833-3|RASSF7', 'nc|ENSG00000099849|Q02833-2|RASSF7', 'ENSG00000099849|ENST00000397583|RASSF7'] 74107 11568 NDSVDPTV True NCI_RA007_Epitope_Rep2 845.37667672001 845.3761249679301 49.587 1 -1.0114515747278405 0.31326211430389145 1.0 11514 18667 DFKTYMDQAC True PC9_epitope_Rep5 1220.484195647 1220.48308993586 76.826 2 -1.011493101325225 0.31328447030444406 1.0 ['NXT1|p.V10M|1|0.12|ENSG00000132661|chr20:23354069-23354069|G/A|missense_variant'] 43010 12327 IETGGTPRSL True PC9_epitope_Rep2 1029.54547338061 1029.54436993586 52.728 2 -1.0115458916506792 0.3133159268929504 1.0 ['AIFM1|p.A259E|1|0.11|ENSG00000156709|chrX:130140538-130140538|G/T|missense_variant'] 83614 7683 PVDIFYLQSP True PC9_epitope_Rep3 1177.60192562757 1177.60027490379 34.55 3 -1.0115914744173802 0.3133159268929504 1.0 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 67064 12450 LSQALQAGTV True PC9_epitope_Rep4 986.5396597241798 986.53856993586 55.697 2 -1.0116292843006875 0.31333828129141705 1.0 ['nc|ENSG00000111275|P05091-2|ALDH2', 'ENST00000548536.1_1_12:112213467-112247376:+|nuORF', 'ENSG00000111275|ENST00000261733|ALDH2'] 131359 6427 VTGSSRVP True NCI_RA007_Epitope_Rep1 801.43446637965 801.43336993586 29.023 2 -1.0117398839980127 0.3133788350672586 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1', 'nc|ENSG00000085382|Q8IYU2-2|HACE1', 'nc|ENSG00000085382|Q8IYU2-3|HACE1', 'ENST00000582081.5_1_17:62541968-62590137:-|nuORF', 'ENSG00000108854|ENST00000262435|SMURF2'] 102482 17738 SLVFHLTQFMP True PC9_epitope_Rep2 1318.6743793751798 1318.67328993586 73.51 2 -1.0117645329480547 0.3133788350672586 1.0 ['ENST00000228825.11_1_12:110874003-110874424:-|nuORF'] 66138 15529 LSELTQEQK True PC9_epitope_Rep1 1074.55570371114 1074.55460993586 64.556 2 -1.0117661023338733 0.3133788350672586 1.0 ['ENST00000559367.1_1_4:74034679-74088744:-|nuORF'] 127627 14652 VPAAPAPP True H1975_Epitope_Rep2 718.40137534622 718.40082496793 61.517 1 -1.0118628497324031 0.3134102866533257 1.0 ['ETV5|p.P257A|1|0.14|ENSG00000244405|chr3:186065954-186065954|G/C|missense_variant'] 79666 2686 PDRKAAVSHW True PC9_epitope_Rep3 1165.59924028897 1165.5976049037902 14.799 3 -1.011868527257871 0.3134102866533257 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'CTNNB1|p.V541Kfs*33|1|0.06|ENSG00000168036|chr3:41234233-41234234|-/AAAAGTAGTTC|frameshift_variant', 'CTNNB1|p.L540Vfs*34|1|0.07|ENSG00000168036|chr3:41234231-41234232|-/GTATCAA|frameshift_variant'] 75960 18224 NLTLIDLPG True PC9_epitope_Rep4 954.5385970950199 954.53750993586 78.169 2 -1.0119076567710614 0.3134243307712695 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3'] 131270 13534 VTFPDLGP True PC9_epitope_Rep3 844.4330693973199 844.43196993586 57.112 2 -1.011913945811041 0.3134243307712695 1.0 ['CON__ENSEMBL:ENSBTAP00000016285'] 49103 12026 KEIFHERDPFS True NCI_RA007_Epitope_Rep5 1403.68336383575 1403.6822699358602 52.919 2 -1.0119183481475662 0.3134243307712695 1.0 ['ENSG00000172404|ENST00000307221|DNAJB7'] 58213 13435 LELERRSQE True PC9_epitope_Rep6 1158.59929985862 1158.59820993586 63.367 2 -1.0119779210256137 0.31344668106704127 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 59344 11378 LFKMKRNYYYF True H1975_Epitope_Rep1 1571.79589149019 1571.79478993586 48.744 2 -1.0120205845166443 0.31350878587898545 1.0 ['ENST00000506103.2_1_4:56284174-56284276:+|nuORF'] 90751 3454 RERPPEEVAA True NCI_RA007_Epitope_Rep5 1152.58873517492 1152.5870849037901 19.04 3 -1.0120585834962543 0.31351788293600835 1.0 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 19443 11669 ELNHQHAAA True H1975_Epitope_Rep1 989.4678917662499 989.46678993586 49.874 2 -1.0121302869533721 0.31359323651012405 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'FAM184A|p.K1048Vfs*7|1|0.04|ENSG00000111879|chr6:118961960-118961961|-/TTTTAAC|frameshift_variant', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 121087 11805 VEREKISH True H1975_Epitope_Rep3 996.53524305008 996.53414993586 50.555 2 -1.0121811109155119 0.31361558338302525 1.0 ['SERAC1|p.M71Ifs*12|1|0.19|ENSG00000122335|chr6:158150505-158150505|C/-|frameshift_variant'] 93370 21103 RPYRFYFYMWK True NCI_RA007_Epitope_Rep2 1655.8071248802296 1655.8060299358601 87.292 2 -1.0123185712293397 0.3136909336654917 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 17469 9252 EHFINHLT True PC9_epitope_Rep2 1009.49812926537 1009.49702993586 40.926 2 -1.0123333593787596 0.31370002782673223 1.0 ['ENST00000503202.1_1_4:83323057-83323543:-|nuORF'] 5307 7766 ALQQLEKYKPY True H1975_Epitope_Rep3 1379.74490146315 1379.74380993586 34.857 2 -1.012351730153077 0.31370574517701927 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 128884 7635 VQESGDRHQLR True NCI_RA007_Epitope_Rep1 1323.66435972667 1323.6632699358602 33.691 2 -1.0123877481294425 0.31370574517701927 1.0 ['ENST00000576921.1_1_16:3073594-3073723:-|nuORF'] 42128 10030 IDNLDERLPR True H1975_Epitope_Rep1 1239.65714908791 1239.6560499358602 43.519 2 -1.0124071554805085 0.31370574517701927 1.0 ['ENST00000462786.1_1_X:48564870-48565958:+|nuORF', 'ENST00000482260.1_1_X:48563729-48565958:+|nuORF', 'ENSG00000101945|ENST00000376687|SUV39H1', 'nc|ENSG00000101945|O43463-2|SUV39H1'] 86822 11635 QLPWWQWLKWR True NCI_RA007_Epitope_Rep2 1625.86193733441 1625.8608499358602 49.85 2 -1.0124073398839315 0.31370574517701927 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 57234 9843 LDWIHHYVP True PC9_epitope_Rep3 1178.5872786229402 1178.5861899358601 42.822 2 -1.0124075546502431 0.31370574517701927 1.0 ['nc|ENSG00000172236|Q15661-2|TPSAB1', 'ENSG00000197253|ENST00000606293|TPSB2', 'ENSG00000172236|ENST00000338844|TPSAB1'] 13708 19399 DPTPKLFALR True PC9_epitope_Rep5 1156.6604435631998 1156.65934993586 79.664 2 -1.0124183499827946 0.31371483841903725 1.0 ['nc|ENSG00000163521|Q6UWU2-2|GLB1L', 'ENSG00000163521|ENST00000295759|GLB1L'] 98404 15559 SFDWYLKNVFP True PC9_epitope_Rep1 1414.6921376143 1414.69104993586 64.671 2 -1.0124397486282548 0.3137239314200917 1.0 ['ENSG00000257594|ENST00000529983|GALNT4', 'nc|ENSG00000257594|Q8N4A0-2|GALNT4', 'ENST00000547474.1_3_12:89916592-89919989:-|nuORF'] 79825 18941 PEGALISKCS True PC9_epitope_Rep6 1003.5008316873101 1003.49972993586 85.502 2 -1.0124802290003034 0.31374211669934815 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 67522 18415 LSTKFKYRYE True PC9_epitope_Rep2 1333.7030366511697 1333.70192993586 76.164 2 -1.0124832549506921 0.31374211669934815 1.0 ['ENSG00000166349|ENST00000299440|RAG1'] 25748 10321 FESYGCYC True H1975_Epitope_Rep3 970.3200904440198 970.31898993586 44.751 2 -1.012552625253478 0.3137512089775693 1.0 ['ENSG00000253117|ENST00000254627|OC90', 'nc|ENSG00000253117|Q02509-3|OC90'] 141973 22881 YVIKTTKLK True PC9_epitope_Rep4 1092.6906810623198 1092.68958993586 96.229 2 -1.0126037380501065 0.31377354990858264 1.0 ['ENST00000474983.5_1_6:10529144-10530083:+|nuORF', 'ENSG00000111846|ENST00000495262|GCNT2'] 139591 12085 YLWLLNGQ True NCI_RA007_Epitope_Rep4 1005.5283667644899 1005.52726993586 53.484 2 -1.0126430157087836 0.313782641529432 1.0 ['ENSG00000170848|ENST00000187910|PSG6', 'nc|ENSG00000170848|Q00889|PSG6', 'ENST00000402456.4_1_19:43414555-43422019:-|nuORF'] 84587 16883 QCSDCRPRVT True PC9_epitope_Rep1 1163.51756146395 1163.5164699358602 69.764 2 -1.012651496363752 0.31379173290937995 1.0 ['ENST00000357115.7_2_4:151935804-151936634:-|nuORF'] 66845 11779 LSMVMHNY True H1975_Epitope_Rep2 993.4412086362099 993.44010993586 50.382 2 -1.0126945763345903 0.3138273207827135 1.0 ['ENSG00000174718|ENST00000312561|RESF1'] 43164 19384 IFERFLNKLCL True PC9_epitope_Rep5 1394.7744277696197 1394.77279490379 79.606 3 -1.0128204741249296 0.31383641132985346 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 112020 14422 TIRYRKIGP True PC9_epitope_Rep5 1102.66111226954 1102.6600099358602 60.473 2 -1.0128799446801515 0.31384134386095064 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 100863 6699 SLEQWAAW True NCI_RA007_Epitope_Rep2 989.4606811274898 989.45958993586 30.671 2 -1.0128900154640845 0.31384134386095064 1.0 ['ENSG00000132005|ENST00000254325|RFX1'] 15814 17333 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 73.445 2 -1.0129400313947712 0.3138901768563291 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 59251 7400 LFFHYEFQNQR True H1975_Epitope_Rep1 1527.72589735407 1527.72480993586 33.469 2 -1.012996699761608 0.3139216023951144 1.0 ['ENSG00000160703|ENST00000409109|NLRX1', 'ENST00000481860.6_1_11:119043673-119051967:+|nuORF', 'nc|ENSG00000160703|Q86UT6-2|NLRX1'] 122536 4819 VGESNHQAF True PC9_epitope_Rep1 987.4410083120699 987.43990993586 23.406 2 -1.0129991471478548 0.3139216023951144 1.0 ['nc|ENSG00000184307|Q8IYP9|ZDHHC23', 'ENSG00000184307|ENST00000638807|ZDHHC23'] 79326 11109 PARLGRHP True PC9_epitope_Rep3 902.51986776946 902.51876993586 47.728 2 -1.0130523389138466 0.3139306909707503 1.0 ['ENST00000342085.8_1_16:2647764-2648328:+|nuORF'] 78842 14296 PAELHLSLS True PC9_epitope_Rep4 965.51819600361 965.51708993586 62.89 2 -1.0130911733476202 0.31395795525294407 1.0 ['ENSG00000197587|ENST00000360032|DMBX1', 'nc|ENSG00000197587|Q8NFW5|DMBX1'] 25193 27497 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 112.9 2 -1.0130995245301155 0.31395795525294407 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57745 18019 LEENLCYRDF True PC9_epitope_Rep2 1300.5757875327197 1300.57468993586 74.615 2 -1.0131091548481808 0.31395795525294407 1.0 ['ENSG00000135951|ENST00000393483|TSGA10'] 121636 13284 VFICYWDGT True PC9_epitope_Rep2 1102.4793679667398 1102.47826993586 56.373 2 -1.0131592124446873 0.31395872519670437 1.0 ['nc|ENSG00000213996|Q9BZW4-2|TM6SF2', 'ENSG00000213996|ENST00000389363|TM6SF2'] 69650 21037 LVDRRERPL True PC9_epitope_Rep3 1152.6727395824 1152.67108490379 86.197 3 -1.0131864731269704 0.31395872519670437 1.0 ['ENSG00000204217|ENST00000374580|BMPR2'] 67869 11816 LTARFMMGP True H1975_Epitope_Rep1 1022.5041432459399 1022.5030499358601 50.446 2 -1.013212762824217 0.31395872519670437 1.0 ['ENST00000443950.6_1_10:43883130-43883238:-|nuORF'] 25194 27560 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 113.24 2 -1.0133086530141666 0.31400339090812757 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 119155 20702 VAINIPRLLL True PC9_epitope_Rep4 1120.73321458064 1120.73210993586 87.791 2 -1.0133348799292112 0.31400339090812757 1.0 ['nc|ENSG00000147874|Q7Z4H7-2|HAUS6', 'nc|ENSG00000147874|Q7Z4H7-3|HAUS6', 'ENSG00000147874|ENST00000380502|HAUS6'] 129062 13319 VQNYTVNILGK True NCI_RA007_Epitope_Rep1 1247.68738658703 1247.68628993586 55.809 2 -1.0133580002694575 0.31402156348512544 1.0 ['ADNP2|p.E144K|1|0.1|ENSG00000101544|chr18:80135843-80135843|G/A|missense_variant'] 98722 22495 SGGGGGGGGD True H1975_Epitope_Rep2 676.24124587636 676.24069496793 92.949 1 -1.0133694543852245 0.31402156348512544 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 71114 13777 LYLLSISRLF True PC9_epitope_Rep1 1223.7277948470298 1223.72614490379 57.84 3 -1.0133968366063113 0.3140264900662252 1.0 ['ENST00000566111.5_1_1:158970052-158970124:+|nuORF'] 66751 10552 LSLLHTSLSAY True NCI_RA007_Epitope_Rep1 1203.64993844915 1203.6488499358602 45.029 2 -1.013397531671954 0.3140264900662252 1.0 ['ENSG00000162063|ENST00000397066|CCNF'] 33435 21698 GLAHLNRGVF True PC9_epitope_Rep1 1082.5985120129799 1082.59740993586 88.291 2 -1.0135050545532545 0.3141282896915273 1.0 ['ENST00000228928.11_1_12:113409775-113410174:+|nuORF'] 125114 17531 VIFKYWKFHFQ True H1975_Epitope_Rep1 1541.8183411869297 1541.8172499358602 72.932 2 -1.0135105559038968 0.3141373738444015 1.0 ['ENST00000524683.5_1_11:121175009-121175207:+|nuORF'] 94821 14976 RSRMWKWRPRK True H1975_Epitope_Rep1 1585.88883787193 1585.88774993586 62.848 2 -1.013616036096215 0.31419111317131315 1.0 ['ENST00000359013.4_1_3:30648217-30664756:+|nuORF'] 68743 22830 LTLDPNDENL True PC9_epitope_Rep3 1142.5455329502602 1142.54442993586 93.088 2 -1.0136350766574203 0.31419111317131315 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 139698 6525 YNKFKNNCFC True NCI_RA007_Epitope_Rep5 1279.54779896307 1279.54615490379 31.763 3 -1.0136416657594043 0.31419111317131315 1.0 ['SLC6A14|p.S345C|1|0.2|ENSG00000268104|chrX:116451545-116451545|C/G|missense_variant'] 34003 11524 GLTLKVFFTKA True PC9_epitope_Rep6 1223.7277948470298 1223.72614490379 55.411 3 -1.0136759701127023 0.314197555387814 1.0 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 120886 8993 VENGPSPGRSP True H1975_Epitope_Rep3 1095.53088594563 1095.5297899358602 39.587 2 -1.0136774794911347 0.314197555387814 1.0 ['nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B'] 126334 25185 VLILILCLKV True PC9_epitope_Rep2 1125.75592417117 1125.75537496793 102.54 1 -1.0136910376261643 0.314197555387814 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 123654 5367 VGQLWYFWR True PC9_epitope_Rep5 1253.6345631685297 1253.6329049037902 25.658 3 -1.0137040098805201 0.314197555387814 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 40942 12991 HSTSPAHKYYL True PC9_epitope_Rep2 1302.63568536734 1302.63458993586 55.258 2 -1.0137083519936658 0.314197555387814 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1'] 16903 13134 EFLTFEVP True PC9_epitope_Rep3 980.4854988929999 980.48440993586 55.545 2 -1.0137147284305204 0.314197555387814 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3', 'nc|ENSG00000148498|Q8TEW0-9|PARD3', 'nc|ENSG00000148498|Q8TEW0-10|PARD3', 'nc|ENSG00000148498|Q8TEW0-8|PARD3'] 136506 10638 WVVFWEHRLLP True PC9_epitope_Rep1 1480.7979400955198 1480.79629490379 45.811 3 -1.0137301422707268 0.314197555387814 1.0 ['ENST00000468164.1_1_9:97818730-97844994:+|nuORF'] 87531 9119 QQISLPELP True H1975_Epitope_Rep1 1023.5600608155898 1023.5589699358601 39.98 2 -1.013735115811765 0.314197555387814 1.0 ['ENSG00000126838|ENST00000261336|PZP', 'nc|ENSG00000126838|P20742-2|PZP'] 30812 7776 GAPAETAVAA True PC9_epitope_Rep2 856.4290466460399 856.4279499358599 35.283 2 -1.0138185114114764 0.31421987975739596 1.0 ['ENST00000573331.5_1_17:7297739-7306647:-|nuORF'] 3236 8141 AGESSHGWP True H1975_Epitope_Rep1 926.38824446322 926.38714993586 36.254 2 -1.0138604936584235 0.314238042269188 1.0 ['GDF2|p.E301Gfs*48|1|0.19|ENSG00000263761|chr10:47325392-47325402|CACGAGGAGGA/-|frameshift_variant'] 80222 7392 PGAGSGVP True NCI_RA007_Epitope_Rep2 640.31803964508 640.3174949679301 33.379 1 -1.0138618071724215 0.314238042269188 1.0 ['ENSG00000143162|ENST00000370509|CREG1'] 94972 24263 RTLRIVREHY True PC9_epitope_Rep4 1341.7629515691299 1341.76129490379 101.81 3 -1.0139259897404511 0.3142652842331069 1.0 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'ENST00000565281.5_1_15:66585934-66615040:+|nuORF'] 2938 4403 AFAMPLPPHP True NCI_RA007_Epitope_Rep5 1076.54772231008 1076.5466299358602 23.566 2 -1.0139349489596567 0.3142652842331069 1.0 ['ENSG00000125363|ENST00000380714|AMELX', 'ENSG00000099721|ENST00000651267|AMELY', 'nc|ENSG00000125363|Q99217-3|AMELX', 'nc|ENSG00000099721|Q99218|AMELY'] 53511 1138 KRKRRKKKGH True H1975_Epitope_Rep1 1320.86908840352 1320.8674349037901 5.9381 3 -1.0139548868238228 0.3142652842331069 1.0 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 273 4805 AAGNSGCF True NCI_RA007_Epitope_Rep2 725.28027423737 725.2797249679301 23.317 1 -1.0139674031661798 0.31427436440677964 1.0 ['ENST00000301633.8_1_17:76219650-76219956:+|nuORF'] 38031 7713 HARALLPLP True H1975_Epitope_Rep2 986.6025347642599 986.60142993586 34.621 2 -1.014020605421776 0.3143231683902491 1.0 ['GRB14|p.P205Sfs*10|1|0.13|ENSG00000115290|chr2:164525069-164525070|-/A|frameshift_variant', 'ENST00000488342.5_1_2:165365032-165477819:-|nuORF', 'ENSG00000115290|ENST00000263915|GRB14'] 18655 18187 ELAAALNEF True PC9_epitope_Rep3 976.4865615221601 976.48546993586 75.165 2 -1.0140873635995122 0.31432808548389235 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'CTNNA2|p.G274R|1|0.11|ENSG00000066032|chr2:79874310-79874310|G/C|missense_variant'] 71178 8292 LYNFDLRGKDK True H1975_Epitope_Rep1 1367.7197493444698 1367.7186499358602 36.827 2 -1.0140888403343093 0.31432808548389235 1.0 ['ENSG00000156463|ENST00000359120|SH3RF2'] 96814 8778 SAQTHFAA True PC9_epitope_Rep5 831.3875161872298 831.38640993586 38.707 2 -1.014155964338397 0.31435040516921775 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 6235 7017 APPSCPCPWLW True H1975_Epitope_Rep2 1255.55182171435 1255.5501749037899 31.916 3 -1.0141906329447052 0.3143511591881049 1.0 ['ENST00000366911.9_1_6:161556936-161557113:-|nuORF'] 109572 4931 TDVPSSSAPP True H1975_Epitope_Rep2 956.445090633 956.44398993586 24.05 2 -1.014196577549528 0.3143511591881049 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1', 'ENST00000518820.1_1_8:143561046-143604069:+|nuORF'] 66981 17830 LSPESPPLLP True PC9_epitope_Rep1 1048.580461907 1048.57936993586 73.376 2 -1.0142012404968688 0.3143511591881049 1.0 ['ENST00000423414.5_1_7:130668826-130792751:-|nuORF', 'ENST00000451786.5_1_7:130737305-130792820:-|nuORF', 'ENST00000429901.1_1_7:130737210-130792820:-|nuORF'] 130332 19794 VSKHRLQGF True NCI_RA007_Epitope_Rep3 1070.5985120129797 1070.59740993586 86.263 2 -1.0142395282983392 0.3143734773858701 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 37064 18062 GVPNYPGLFLP True PC9_epitope_Rep1 1172.62299542532 1172.6213549037902 74.268 3 -1.0142685327614986 0.31439579499265186 1.0 ['ENST00000261254.7_1_12:4412550-4412766:+|nuORF'] 93437 17946 RQGLQVSHTQ True PC9_epitope_Rep3 1152.59996856496 1152.5983349037901 74.233 3 -1.0142781075022453 0.31440070964239847 1.0 ['ENST00000420329.6_1_15:91186107-91186239:+|nuORF'] 28705 16289 FSRLALPTRAS True H1975_Epitope_Rep1 1217.68805529337 1217.6869499358602 68.01 2 -1.014307980988946 0.31440070964239847 1.0 ['ENST00000371975.8_1_1:46713425-46713950:+|nuORF'] 128645 19866 VPVFIPLE True PC9_epitope_Rep1 912.5320551625998 912.53150496793 81.233 1 -1.014356222579726 0.31440978658052215 1.0 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF'] 36552 14612 GVGWAAHP True PC9_epitope_Rep1 793.38712226441 793.38602993586 61.028 2 -1.0143799319961115 0.3144321025247243 1.0 ['ENST00000544949.5_1_12:6942900-6943209:+|nuORF', 'ENST00000538102.5_1_12:6939819-6943209:+|nuORF'] 74668 24329 NGNGHEHC True PC9_epitope_Rep5 866.3089485967 866.30784993586 98.616 2 -1.014421430290137 0.3144411788068949 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 98729 21976 SGGGGGGGGD True NCI_RA007_Epitope_Rep4 676.24124587636 676.24069496793 95.293 1 -1.0144429222332976 0.3144502548487456 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 15934 7498 EDLSVIWR True NCI_RA007_Epitope_Rep5 1016.52909504048 1016.52798993586 35.523 2 -1.0145016095963455 0.3144684062115255 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 56841 20756 LDPAQRNLYRD True PC9_epitope_Rep2 1359.68951184535 1359.6884099358601 85.28 2 -1.0145032263304925 0.3144684062115255 1.0 ['ENSG00000178150|ENST00000595607|ZNF114', 'ENST00000343776.9_1_1:227751395-227838673:+|nuORF', 'ENST00000608949.5_1_1:227751395-227838673:+|nuORF'] 129995 25688 VRVVVPGV True PC9_epitope_Rep2 823.5279728416698 823.5274249679301 104.52 1 -1.0145246362908338 0.31447748153247373 1.0 ['ENSG00000139531|ENST00000266971|SUOX'] 88478 21379 QSSVVRCRPLT True PC9_epitope_Rep6 1244.6659399497998 1244.66484993586 95.107 2 -1.0146009114622248 0.31448730507532235 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 89757 24216 RAGFSTQP True H1975_Epitope_Rep3 862.4297153523798 862.42860993586 100.88 2 -1.0146497449504195 0.31448730507532235 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 98219 3991 SETQRQEI True PC9_epitope_Rep6 989.4777877436098 989.47668993586 22.118 2 -1.0146613558864552 0.31448730507532235 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4'] 5652 16848 APAARRTL True H1975_Epitope_Rep1 854.50863437942 854.50808496793 70.215 1 -1.0146648165044878 0.31448730507532235 1.0 ['ENSG00000165152|ENST00000374848|PGAP4'] 84457 11111 QAHWEQAL True NCI_RA007_Epitope_Rep5 981.4668291370898 981.4657299358599 49.373 2 -1.0147111743958526 0.31450961703930214 1.0 ['CFAP46|p.Q2466H|1|0.48|ENSG00000171811|chr10:132812888-132812888|C/A|missense_variant'] 68136 15672 LTDPRQFL True PC9_epitope_Rep1 988.53418042092 988.53308993586 65.104 2 -1.0147889966278636 0.3145848776871757 1.0 ['ENST00000500118.2_1_8:6262544-6263480:-|nuORF'] 135935 14596 WPWLRWWQELW True H1975_Epitope_Rep3 1684.83030285296 1684.82920993586 61.511 2 -1.0148038724841888 0.31460718776887947 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 26630 18096 FINNPKPKKPL True NCI_RA007_Epitope_Rep2 1294.7761420217798 1294.7750499358601 75.142 2 -1.0148228188740902 0.3146162602917428 1.0 ['ENST00000473604.2_1_9:132580793-132585603:-|nuORF', 'ENSG00000136827|ENST00000351698|TOR1A', 'nc|ENSG00000136827|O14656-2|TOR1A', 'ENST00000473084.1_1_9:132584712-132586364:-|nuORF'] 137726 18061 YENDYQSL True PC9_epitope_Rep5 1030.42435518842 1030.4232499358602 74.485 2 -1.0149894687939185 0.31467827974638307 1.0 ['RAD51AP2|p.P332Q|1|0.15|ENSG00000214842|chr2:17517421-17517421|G/T|missense_variant'] 68915 10369 LTNSRILVDVP True H1975_Epitope_Rep1 1225.70303665117 1225.70192993586 44.833 2 -1.0150525766959817 0.314709658632146 1.0 ['nc|ENSG00000203995|Q6WRX3-2|ZYG11A', 'ENSG00000203995|ENST00000371528|ZYG11A'] 5630 11515 ANVFPLNSD True PC9_epitope_Rep5 975.4661604307499 975.46506993586 49.288 2 -1.0150573638252043 0.314709658632146 1.0 ['ENSG00000196437|ENST00000316950|ZNF569'] 120022 8709 VDRTNHQRERR True NCI_RA007_Epitope_Rep2 1465.76105407617 1465.75994993586 38.523 2 -1.0150752252332476 0.3147145636722214 1.0 ['nc|ENSG00000112038|P35372-8|OPRM1'] 123716 21204 VGREGRLP True PC9_epitope_Rep6 882.5035489989798 882.5030049679301 94.41 1 -1.015086256335648 0.3147145636722214 1.0 ['ENST00000243440.1_1_1:212870399-212873318:-|nuORF'] 10925 9902 DAEAPWLSK True H1975_Epitope_Rep3 1015.49746055903 1015.49636993586 43.119 2 -1.0151196978768884 0.3147501058873359 1.0 ['ENSG00000104529|ENST00000618139|EEF1D', 'ENST00000525223.1_1_8:144671159-144671477:-|nuORF'] 136321 6636 WSWEWYLKEQK True NCI_RA007_Epitope_Rep2 1581.7616141564497 1581.7599749037902 30.424 3 -1.0151906378567779 0.3147856471615952 1.0 ['nc|ENSG00000154655|Q8NA19-2|L3MBTL4', 'ENSG00000154655|ENST00000317931|L3MBTL4', 'nc|ENSG00000154655|Q8NA19|L3MBTL4'] 23609 22197 EWKNSSKEFL True PC9_epitope_Rep4 1266.6244519772997 1266.62334993586 93.626 2 -1.0152627788584605 0.3148211874950367 1.0 ['ENST00000444245.5_1_7:131011571-131012404:-|nuORF'] 69328 12006 LTVGGIPFHEK True NCI_RA007_Epitope_Rep1 1196.65535818276 1196.6542699358602 50.688 2 -1.0152780019325343 0.314843491496261 1.0 ['nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 109569 7400 TDVLTGAAL True PC9_epitope_Rep5 859.4650978015899 859.46400993586 33.421 2 -1.0153423837283002 0.31491456780973304 1.0 ['MTIF2|p.F659Ifs*2|1|0.28|ENSG00000085760|chr2:55237324-55237325|-/T|frameshift_variant', 'ENSG00000085760|ENST00000263629|MTIF2'] 34187 11051 GNGTTNQGIAP True PC9_epitope_Rep1 1028.4886867804798 1028.4875899358601 47.396 2 -1.0153461039037468 0.31491456780973304 1.0 ['nc|ENSG00000136144|Q8NDN9-2|RCBTB1', 'ENSG00000136144|ENST00000378302|RCBTB1'] 141205 14209 YSYVIQNL True PC9_epitope_Rep4 998.50729696674 998.50618993586 62.564 2 -1.0153801818038832 0.31492436574423316 1.0 ['ENST00000449089.6_1_9:132657774-132657972:-|nuORF'] 16778 6960 EETSWPAFER True H1975_Epitope_Rep1 1250.5567663402996 1250.5556699358601 31.811 2 -1.0153905559450678 0.31492436574423316 1.0 ['ENSG00000116191|ENST00000367635|RALGPS2', 'ENST00000480743.1_1_1:178855116-178863183:+|nuORF'] 135351 3424 WGPFHCGH True PC9_epitope_Rep2 939.3809913381499 939.37988993586 18.447 2 -1.0153931990422862 0.31492436574423316 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|180|2|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|39', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|39', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|39', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|39', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|39', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|39'] 84165 10239 PYIKDSVR True NCI_RA007_Epitope_Rep5 976.5341804209199 976.53308993586 46.015 2 -1.015420585844876 0.31492436574423316 1.0 ['nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'ENSG00000198718|ENST00000361462|TOGARAM1'] 25940 20372 FFTVIFQWLKV True PC9_epitope_Rep3 1426.80129414046 1426.80018993586 83.612 2 -1.0155016695904315 0.3149599004790768 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 47592 11271 IVVQVETP True PC9_epitope_Rep2 883.5014833103099 883.50038993586 48.68 2 -1.015524899014117 0.314968966293027 1.0 ['nc|ENSG00000132359|Q684P5-3|RAP1GAP2', 'nc|ENSG00000132359|Q684P5-2|RAP1GAP2', 'ENSG00000132359|ENST00000254695|RAP1GAP2', 'ENST00000574515.1_1_17:2894647-2911342:+|nuORF'] 126603 12565 VLMAQKEGKR True NCI_RA007_Epitope_Rep5 1158.65431263694 1158.65320993586 54.985 2 -1.015546905732825 0.3149780318670266 1.0 ['ENSG00000170949|ENST00000683776|ZNF160'] 80690 15009 PGVTFKLLL True NCI_RA007_Epitope_Rep5 986.6164534928998 986.61534993586 64.401 2 -1.0155801550302657 0.31498709720108514 1.0 ['ENST00000361246.6_1_14:103432671-103433458:-|nuORF'] 29251 13072 FTYFYKGKEYW True NCI_RA007_Epitope_Rep1 1530.71835236214 1530.71724993586 54.84 2 -1.0156086172651941 0.31499616229521216 1.0 ['ENSG00000156103|ENST00000286614|MMP16'] 110532 12705 TFLGATAGMRL True PC9_epitope_Rep3 1136.60121443492 1136.59957490379 53.893 3 -1.015626503250674 0.31501846043908055 1.0 ['nc|ENSG00000188833|Q5MY95-2|ENTPD8', 'ENSG00000188833|ENST00000371506|ENTPD8'] 101827 16998 SLPGLLSHLL True PC9_epitope_Rep1 1048.62808080576 1048.6269899358601 70.206 2 -1.0156659799808991 0.3150637802360663 1.0 ['ENST00000539644.5_1_12:124497619-124497844:+|nuORF'] 7742 10270 ASPQADDQDM True H1975_Epitope_Rep1 1076.40805350128 1076.4069499358602 44.448 2 -1.0156839625231107 0.3150637802360663 1.0 ['ENSG00000230301|ENST00000615035|OR5H6', 'nc|ENSG00000230301|Q8NGV6|OR5H6', 'nc|ENSG00000232535|P0DN80|OR5H8', 'ENSG00000197938|ENST00000355273|OR5H2', 'ENSG00000236032|ENST00000641380|OR5H14', 'ENSG00000231192|ENST00000641874|OR5H1'] 27590 10480 FNNSEYHL True PC9_epitope_Rep1 1022.4457593393402 1022.4446699358599 45.2 2 -1.0156941637748913 0.3150637802360663 1.0 ['ENSG00000090402|ENST00000264382|SI'] 37809 4113 GYFRVWKVPKP True NCI_RA007_Epitope_Rep3 1375.7764763749497 1375.7748449037902 22.715 3 -1.015719354767379 0.3150637802360663 1.0 ['ENSG00000187166|ENST00000335017|H1-7'] 29725 12070 FVMVAKTVPD True H1975_Epitope_Rep3 1105.58416738845 1105.58306993586 51.59 2 -1.015721245222888 0.3150637802360663 1.0 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 33485 17579 GLAVIELRAP True PC9_epitope_Rep6 1037.6233297784897 1037.62222993586 80.257 2 -1.0157451395822368 0.3150819064757721 1.0 ['ENST00000454838.6_1_11:869018-869621:-|nuORF'] 142180 17365 YVTMEEYFMR True PC9_epitope_Rep4 1367.58899506871 1367.5878899358602 74.798 2 -1.0157637612268493 0.3150819064757721 1.0 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000526700.5_1_16:70530266-70542451:-|nuORF'] 81686 15233 PLLTPAPLDSG True H1975_Epitope_Rep2 1079.5862755634298 1079.5851699358602 63.752 2 -1.0158151597454232 0.31510003175611306 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant'] 16417 15676 EEKKLTVD True NCI_RA007_Epitope_Rep5 960.5127762699999 960.51166993586 67.013 2 -1.0158254796008424 0.31510003175611306 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 101789 17309 SLPARTSIIAA True NCI_RA007_Epitope_Rep3 1098.63970811862 1098.6386099358601 75.966 2 -1.0158776863100674 0.3151487886526324 1.0 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 46491 8152 ISVPAPVAAAA True H1975_Epitope_Rep2 965.5545815123298 965.5540349679301 36.306 1 -1.0159125215864606 0.3151536802550973 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 89621 18104 QYRLRRERNNI True PC9_epitope_Rep6 1516.8334907404396 1516.8318449037902 82.273 3 -1.0159220757007204 0.3151536802550973 1.0 ['CEBPE|p.E206Q|1|0.06|ENSG00000092067|chr14:23117717-23117717|C/G|missense_variant'] 120142 7306 VEAIRKNP True NCI_RA007_Epitope_Rep1 925.53451477409 925.53340993586 32.41 2 -1.0159624175223285 0.3152024345064832 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 40656 23711 HRPSRVQLVL True H1975_Epitope_Rep2 1203.72002412799 1203.71836490379 97.704 3 -1.0160431649658597 0.3152511874677498 1.0 ['ENSG00000135898|ENST00000650999|GPR55'] 53518 21381 KRKTLPVQEH True H1975_Epitope_Rep2 1234.7146043943799 1234.71295490379 88.467 3 -1.016061798130013 0.3152519051651143 1.0 ['ENST00000260970.7_1_2:170440931-170460199:+|nuORF'] 84779 8807 QDVIPDSQAA True NCI_RA007_Epitope_Rep1 1042.49310345458 1042.4925749679298 38.259 1 -1.0161075408592632 0.3152519051651143 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 61647 14772 LKQRWELERLE True PC9_epitope_Rep5 1498.8256113953396 1498.82395490379 61.82 3 -1.0161129055903892 0.3152519051651143 1.0 ['ENSG00000139437|ENST00000405876|TCHP'] 11379 10992 DEREPPGPP True H1975_Epitope_Rep2 992.4563240230398 992.45522993586 47.307 2 -1.016231044682242 0.3152874247535887 1.0 ['ENSG00000177614|ENST00000391860|PGBD5'] 75472 19323 NKIYVFFQHAF True PC9_epitope_Rep2 1412.72410644892 1412.72245490379 79.7 3 -1.0162429737509917 0.31529648347577593 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 113208 6671 TLQHQLPVSGY True H1975_Epitope_Rep2 1241.6404363946099 1241.63878490379 30.569 3 -1.0163165656509756 0.31537169089922873 1.0 ['nc|ENSG00000131759|P10276-3|RARA', 'ENSG00000131759|ENST00000254066|RARA'] 75374 24645 NISVPGLQ True PC9_epitope_Rep4 826.45486747106 826.45376993586 103.29 2 -1.0163996335174463 0.31542949370940215 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF', 'nc|ENSG00000131023|O95835-2|LATS1'] 81592 17906 PLKVKDIP True PC9_epitope_Rep2 908.5695033004798 908.56840993586 74.179 2 -1.0164061895664949 0.31542949370940215 1.0 ['nc|ENSG00000109680|Q8N5T2-2|TBC1D19', 'ENSG00000109680|ENST00000264866|TBC1D19', 'ENST00000502873.5_1_4:26585743-26755545:+|nuORF'] 120224 14131 VEASGSAA True H1975_Epitope_Rep3 690.3184335678999 690.31788496793 59.684 1 -1.0164908427340216 0.31545177933589097 1.0 ['ENST00000559000.5_1_15:57210403-57210766:-|nuORF'] 92681 16928 RNRFKLFLE True H1975_Epitope_Rep3 1221.6982260542497 1221.6965849037902 70.688 3 -1.0165956553988007 0.3154838282955222 1.0 ['ATP13A1|p.Y475F|1|0.37|ENSG00000105726|chr19:19655426-19655426|T/A|missense_variant'] 58828 10409 LESRDQAW True PC9_epitope_Rep1 1003.4723084403498 1003.47120993586 44.923 2 -1.0166054106095257 0.3154838282955222 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 81539 16489 PLILILTA True H1975_Epitope_Rep2 852.56844067132 852.56734993586 68.643 2 -1.0166327847881245 0.3154838282955222 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 69361 10123 LTVSKYWCYR True PC9_epitope_Rep1 1317.65397828377 1317.6523349037902 43.812 3 -1.0166525401530428 0.3154838282955222 1.0 ['CAV3|p.F65L|1|0.27|ENSG00000182533|chr3:8745606-8745606|C/A|missense_variant'] 44657 23450 ILSMTAQDPD True H1975_Epitope_Rep1 1089.50122561013 1089.50012993586 97.448 2 -1.0166575564926574 0.3154838282955222 1.0 ['PCDHGA4|p.L790Sfs*10|1|0.25|ENSG00000262576|chr5:141357473-141357473|C/-|frameshift_variant', 'nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4', 'ENSG00000262576|ENST00000571252|PCDHGA4', 'PCDHGA4|p.S501F|1|0.25|ENSG00000262576|chr5:141356609-141356609|C/T|missense_variant'] 101214 8138 SLHFSEPSI True PC9_epitope_Rep1 1015.49746055903 1015.49636993586 36.133 2 -1.0167003291616947 0.3155332742496594 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2', 'ENST00000520372.5_1_1:26655223-26662846:-|nuORF'] 98730 24756 SGGGGGGGGD True PC9_epitope_Rep1 676.24124587636 676.24069496793 100.11 1 -1.0167018901786335 0.3155332742496594 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 133252 1220 VVTKEKLLLE True PC9_epitope_Rep5 1170.72237511342 1170.72073490379 6.7742 3 -1.0167414264698802 0.3155332742496594 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 79943 5216 PESFSLSKAE True PC9_epitope_Rep6 1093.52915461013 1093.52804993586 27.831 2 -1.0167510258337975 0.3155332742496594 1.0 ['GALNT15|p.A459S|1|0.12|ENSG00000131386|chr3:16212746-16212746|G/T|missense_variant'] 55812 14262 LAPEMIDSRVL True PC9_epitope_Rep1 1242.6642086143 1242.66256490379 59.682 3 -1.0167849336895942 0.3155952380952381 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 135465 12025 WIEQSVFRQWF True PC9_epitope_Rep4 1524.75138382592 1524.74917987172 54.055 4 -1.016798744237146 0.31560011639903707 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 42098 5677 IDLHYYAQ True PC9_epitope_Rep2 1021.48689587533 1021.48578993586 27.225 2 -1.0168010056774408 0.31560011639903707 1.0 ['ENST00000449421.6_1_17:73205928-73222855:+|nuORF', 'ENST00000583948.5_1_17:73201841-73222120:+|nuORF', 'nc|ENSG00000125450|Q9BW27-3|NUP85', 'ENSG00000125450|ENST00000245544|NUP85', 'ENST00000577561.1_1_17:73214398-73221993:+|nuORF', 'nc|ENSG00000125450|Q9BW27-2|NUP85', 'ENST00000581104.5_1_17:73208151-73231006:+|nuORF'] 130278 6957 VSGPPPLHPDP True H1975_Epitope_Rep3 1111.56620882519 1111.5651099358602 31.722 2 -1.016865798265387 0.3156885308784043 1.0 ['ENST00000575165.6_1_17:19314663-19315981:+|nuORF'] 135611 25427 WLIRLCIFIV True PC9_epitope_Rep2 1274.7573211535 1274.7562299358601 103.49 2 -1.016940488869073 0.31575048939209566 1.0 ['HEATR6|p.S659F|1|0.06|ENSG00000068097|chr17:60057151-60057151|G/A|missense_variant'] 79386 6436 PASPATAAP True PC9_epitope_Rep3 781.39701824177 781.39646496793 29.782 1 -1.0169770184740883 0.31576858979446076 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 41985 10842 IDETRQIL True PC9_epitope_Rep2 986.53965972418 986.53856993586 47.022 2 -1.0170597150566194 0.31576858979446076 1.0 ['ENSG00000123360|ENST00000243052|PDE1B', 'nc|ENSG00000123360|Q01064-2|PDE1B'] 71583 3744 MCTRPPAS True PC9_epitope_Rep2 861.3836937600898 861.38258993586 19.666 2 -1.0171164123777117 0.3157999153528727 1.0 ['ENST00000263207.7_1_22:19978271-20004293:-|nuORF'] 120795 7812 VELEYSRGLEK True H1975_Epitope_Rep3 1321.6877805098495 1321.6866899358602 35.032 2 -1.0171205863182198 0.3157999153528727 1.0 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ARHGAP4|p.S83Afs*38|1|0.81|ENSG00000089820|chrX:153921631-153921631|C/-|frameshift_variant', 'ENST00000470979.1_1_X:153186583-153187260:-|nuORF', 'ENST00000494302.5_1_X:153178504-153191656:-|nuORF', 'ENST00000470209.5_1_X:153178504-153191656:-|nuORF'] 69473 8870 LVAFSLRVEA True NCI_RA007_Epitope_Rep4 1103.6338944621898 1103.63278993586 40.942 2 -1.0171592121820237 0.31580478772649123 1.0 ['ENSG00000182853|ENST00000328739|VMO1', 'VMO1|p.T131Rfs*27|1|0.28|ENSG00000182853|chr17:4785581-4785581|G/-|frameshift_variant'] 82001 15433 PLVAATAL True PC9_epitope_Rep4 754.45889022234 754.4583449679301 67.297 1 -1.0171945925902726 0.31580478772649123 1.0 ['ENST00000441493.6_1_22:18271402-18271729:-|nuORF'] 85299 5633 QEQWEAFVSGP True H1975_Epitope_Rep3 1276.5724164044398 1276.5713099358602 26.704 2 -1.0172125818395086 0.31580548318410856 1.0 ['ENSG00000105063|ENST00000412770|PPP6R1'] 16686 4458 EERLREQEDRL True NCI_RA007_Epitope_Rep5 1471.7379185897496 1471.73626490379 23.792 3 -1.0172185741898647 0.31580548318410856 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4'] 35080 8477 GQVKFVLGP True NCI_RA007_Epitope_Rep2 943.5491022090698 943.54800993586 37.618 2 -1.0172190529232863 0.31580548318410856 1.0 ['ENSG00000137218|ENST00000373018|FRS3'] 83208 22796 PSTVKDCPTL True PC9_epitope_Rep1 1059.52704643515 1059.52647496793 92.496 1 -1.0172498530230254 0.31581453170047874 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4'] 56059 6944 LATAQNLEVP True H1975_Epitope_Rep3 1054.56587447202 1054.56476993586 31.671 2 -1.0173029310400177 0.3158235799775177 1.0 ['ENST00000330720.6_1_19:48892924-48894655:-|nuORF', 'ENST00000594643.1_1_19:48893612-48894655:-|nuORF'] 125667 17254 VKLGPALT True NCI_RA007_Epitope_Rep4 797.50108938749 797.49998993586 74.708 2 -1.017372319912703 0.3158590774439272 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2', 'ENSG00000111961|ENST00000367467|SASH1'] 99689 13622 SIHAYHSF True PC9_epitope_Rep1 960.4453654165201 960.44426993586 57.254 2 -1.0173868356767992 0.3158604638861707 1.0 ['DCAF4L2|p.G222Vfs*3|1|0.06|ENSG00000176566|chr8:87873307-87873308|-/A|frameshift_variant', 'DCAF4L2|p.F249Lfs*25|1|0.12|ENSG00000176566|chr8:87873228-87873228|G/-|frameshift_variant', 'DCAF4L2|p.L285Wfs*6|1|0.37|ENSG00000176566|chr8:87873119-87873119|G/-|frameshift_variant', 'ENSG00000176566|ENST00000319675|DCAF4L2'] 11444 5183 DEYKEIFYRRN True PC9_epitope_Rep1 1531.7419413410298 1531.74028490379 24.788 3 -1.0173960323498121 0.3158604638861707 1.0 ['ENSG00000115339|ENST00000392701|GALNT3'] 126892 15647 VLQPKVEF True NCI_RA007_Epitope_Rep4 958.5487678558999 958.54766993586 67.963 2 -1.0174040047551531 0.3158604638861707 1.0 ['ENSG00000147041|ENST00000297875|SYTL5', 'nc|ENSG00000147041|Q8TDW5-2|SYTL5'] 97016 14525 SCGFDAGD True NCI_RA007_Epitope_Rep5 770.25411905918 770.25357496793 62.546 1 -1.0174042505798095 0.3158604638861707 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'ENST00000552009.1_1_12:102159833-102159905:-|nuORF'] 58958 5747 LETTGTSLP True PC9_epitope_Rep2 917.47057710485 917.46948993586 27.497 2 -1.0174264182249537 0.3158604638861707 1.0 ['ENSG00000136014|ENST00000258499|USP44'] 57286 20146 LEAAEFLERRE True H1975_Epitope_Rep1 1361.69392851945 1361.6928299358601 83.838 2 -1.0174376594132748 0.3158604638861707 1.0 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF', 'nc|ENSG00000119950|P50539|MXI1'] 83112 17267 PSPRRSIL True PC9_epitope_Rep4 924.5504991913999 924.54940993586 74.423 2 -1.0174709589127797 0.31587855707182905 1.0 ['HTRA1|p.E366Sfs*22|1|0.11|ENSG00000166033|chr10:122508745-122508745|G/-|frameshift_variant'] 139652 12892 YMPPAHRNF True PC9_epitope_Rep6 1131.52838384783 1131.5272899358602 61.117 2 -1.0174931691197482 0.31587855707182905 1.0 ['ENSG00000131203|ENST00000518237|IDO1'] 76754 10810 NQVWEAADVLI True NCI_RA007_Epitope_Rep2 1256.6401020414398 1256.63900993586 46.651 2 -1.0175671736514038 0.3159140495867769 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 138101 5966 YGGLRGAI True PC9_epitope_Rep6 805.4446371405298 805.44354993586 31.255 2 -1.0176624401788206 0.31596345317272473 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 117493 10930 TVRFVNTL True PC9_epitope_Rep2 948.53926580136 948.53816993586 47.363 2 -1.0176775863610796 0.31596345317272473 1.0 ['nc|ENSG00000163406|Q16348-2|SLC15A2', 'ENSG00000163406|ENST00000489711|SLC15A2'] 88510 19881 QSVMLALRR True PC9_epitope_Rep2 1072.6175332053997 1072.6164299358602 81.865 2 -1.0176776344427643 0.31596345317272473 1.0 ['ENSG00000172247|ENST00000302514|C1QTNF4'] 66175 5975 LSEQVLETFHD True H1975_Epitope_Rep3 1316.62484590012 1316.6237499358601 27.995 2 -1.0176871570392367 0.31596345317272473 1.0 ['COL6A3|p.L1816F|1|0.04|ENSG00000163359|chr2:237366739-237366739|C/A|missense_variant'] 2114 13546 AELKHHHVT True H1975_Epitope_Rep3 1070.56212650426 1070.56102993586 57.387 2 -1.0177115232330172 0.31599476405177773 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.T2866S|1|0.13|ENSG00000054654|chr14:64052509-64052509|A/T|missense_variant'] 34212 10205 GNKPSLTNPF True NCI_RA007_Epitope_Rep5 1073.55055876105 1073.54946993586 45.886 2 -1.0177177656884722 0.31599476405177773 1.0 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'NUP210|p.L754Pfs*53|1|0.09|ENSG00000132182|chr3:13358289-13358290|-/GG|frameshift_variant'] 98718 14681 SGGGGFCD True NCI_RA007_Epitope_Rep5 698.23298969178 698.2324449679301 63.14 1 -1.017759319417216 0.31601285153306097 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 141056 18739 YSMYVLWVV True H1975_Epitope_Rep2 1158.5783537320199 1158.5772499358602 77.785 2 -1.017831724438826 0.31601285153306097 1.0 ['ENST00000295417.3_1_2:208627897-208628047:-|nuORF'] 113772 23026 TMMKKKKKK True PC9_epitope_Rep5 1149.7089910620898 1149.70788993586 93.562 2 -1.0178919545103329 0.3160573808422027 1.0 ['PCDH11X|p.I865T|1|0.49|ENSG00000102290|chrX:91878834-91878834|T/C|missense_variant'] 135162 19872 WELVVRCRS True NCI_RA007_Epitope_Rep5 1146.59679776082 1146.59515490379 83.349 3 -1.0178922756881321 0.3160573808422027 1.0 ['ENST00000484317.5_1_X:153996624-153996699:+|nuORF'] 27328 8903 FLSEPVTVP True H1975_Epitope_Rep3 987.5276980581499 987.52660993586 39.244 2 -1.0179259999173025 0.31607964461367605 1.0 ['ENSG00000154359|ENST00000398246|LONRF1', 'nc|ENSG00000154359|Q17RB8-2|LONRF1', 'LONRF1|p.N455Kfs*2|1|0.12|ENSG00000154359|chr8:12736787-12736788|-/T|frameshift_variant'] 79341 5052 PARPTLLEQV True PC9_epitope_Rep5 1122.6397081186199 1122.63805490379 24.46 3 -1.018003830892395 0.3161019077964488 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 92712 21144 RNVIQRVIR True PC9_epitope_Rep6 1152.7203584811598 1152.7192699358602 94.176 2 -1.018047191152188 0.3161067703169 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF', 'ENST00000489499.5_1_1:114442984-114447339:-|nuORF', 'ENST00000489092.5_1_1:114445268-114447339:-|nuORF', 'nc|ENSG00000134262|Q9Y6B7-2|AP4B1'] 31235 15317 GDDGCCCF True NCI_RA007_Epitope_Rep3 818.20334643962 818.20224993586 67.808 2 -1.0180517379721978 0.3161067703169 1.0 ['ENST00000174618.4_1_17:2288065-2288200:-|nuORF'] 58062 6906 LEIMDWWPWYR True NCI_RA007_Epitope_Rep2 1593.74385591733 1593.74274993586 31.481 2 -1.0181550913624426 0.31618191433104176 1.0 ['ENST00000435844.3_2_20:18550009-18550057:+|nuORF'] 63778 10666 LNESSKNI True PC9_epitope_Rep2 903.46616043075 903.46506993586 46.34 2 -1.0182079750400812 0.31621739532793064 1.0 ['nc|ENSG00000148053|Q16620-7|NTRK2', 'nc|ENSG00000148053|Q16620-2|NTRK2', 'nc|ENSG00000148053|Q16620-3|NTRK2', 'nc|ENSG00000148053|Q16620-5|NTRK2', 'nc|ENSG00000148053|Q16620-6|NTRK2', 'nc|ENSG00000148053|Q16620|NTRK2', 'ENSG00000148053|ENST00000277120|NTRK2', 'NTRK2|p.K312Nfs*13|1|0.23|ENSG00000148053|chr9:84727730-84727730|C/-|frameshift_variant'] 95752 6213 RYHVRWFP True PC9_epitope_Rep2 1159.6039317465898 1159.6028299358602 29.296 2 -1.0182259035660255 0.3162354745316817 1.0 ['ENSG00000011201|ENST00000262648|ANOS1'] 85625 14130 QGKKPLTV True PC9_epitope_Rep4 869.5334521449299 869.53234993586 62.255 2 -1.0182261605956084 0.3162354745316817 1.0 ['ENST00000601992.1_19:20588929-20591822:-|nuORF', 'ENST00000311237.4_19:20578692-20592633:-|nuORF'] 18005 8545 EIDSYLRRELI True H1975_Epitope_Rep1 1405.75652877601 1405.75489490379 37.794 3 -1.0183036318667047 0.3162590879048249 1.0 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A', 'ENST00000460991.1_1_2:85066267-85069119:-|nuORF'] 112106 13109 TIVRIPSAS True PC9_epitope_Rep2 942.5498304850599 942.54872993586 55.699 2 -1.0183290285883353 0.3162590879048249 1.0 ['ENSG00000255804|ENST00000540461|OR6J1'] 141654 8473 YTSSSSSG True NCI_RA007_Epitope_Rep3 774.3031774265801 774.30208993586 40.406 2 -1.0183433744021475 0.3162590879048249 1.0 ['KIF26B|p.G814S|1|0.14|ENSG00000162849|chr1:245685423-245685423|G/A|missense_variant'] 104510 9109 SQMTKEKKITG True NCI_RA007_Epitope_Rep1 1249.6700222707298 1249.6689299358602 39.434 2 -1.0183726593597828 0.3162590879048249 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB'] 56037 7328 LASRGPLAA True PC9_epitope_Rep4 854.4974009893799 854.49630993586 35.515 2 -1.0183856012575665 0.3162590879048249 1.0 ['ENST00000482648.5_1_9:135973742-135973952:-|nuORF'] 126964 13313 VLRMHRYR True PC9_epitope_Rep3 1129.62910094861 1129.62800993586 56.243 2 -1.0183962255035925 0.3162590879048249 1.0 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3'] 92393 9831 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 43.151 2 -1.0183977795681471 0.3162590879048249 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 57185 14496 LDVGSCFNP True PC9_epitope_Rep5 950.41676771018 950.41566993586 60.759 2 -1.018430293075605 0.3162945631914978 1.0 ['ENSG00000164603|ENST00000297145|BMT2'] 39766 8082 HLVSYIKMHPR True NCI_RA007_Epitope_Rep2 1379.7496100041099 1379.74850993586 36.07 2 -1.018491164835847 0.3163036006979326 1.0 ['ENST00000397381.4_1_19:15946156-15946336:+|nuORF'] 9662 17071 AYELLRGRR True H1975_Epitope_Rep2 1132.6465248345598 1132.6454299358602 70.928 2 -1.0185082225739324 0.3163126379654475 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 48310 23666 IYQVRLKMI True PC9_epitope_Rep5 1162.6896355164997 1162.68852993586 96.012 2 -1.018609625817627 0.31635782071955376 1.0 ['ENST00000526129.5_1_1:76198579-76227103:+|nuORF'] 87051 18308 QNFQVLMI True PC9_epitope_Rep3 991.5160878286298 991.51498993586 75.628 2 -1.018627057293062 0.31635782071955376 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 125022 15262 VICPHFVRP True NCI_RA007_Epitope_Rep3 1066.57460576426 1066.57350993586 67.576 2 -1.0186553432315228 0.31635782071955376 1.0 ['nc|ENSG00000169258|Q7Z2K8-2|GPRIN1'] 125418 13296 VITDHGVVP True PC9_epitope_Rep6 935.5076313199099 935.50652993586 62.797 2 -1.0186602874971744 0.31635782071955376 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 139695 7105 YNKFKNNCFC True NCI_RA007_Epitope_Rep1 1279.54779896307 1279.54615490379 31.63 3 -1.0186727457019242 0.31635782071955376 1.0 ['SLC6A14|p.S345C|1|0.2|ENSG00000268104|chrX:116451545-116451545|C/G|missense_variant'] 122408 5222 VGDREGTPV True PC9_epitope_Rep5 928.4614094034798 928.46030993586 25.103 2 -1.0187908664630108 0.31639329095018437 1.0 ['ENSG00000114270|ENST00000681320|COL7A1', 'nc|ENSG00000114270|Q02388-2|COL7A1'] 70521 16874 LVWICLFW True PC9_epitope_Rep4 1078.5673951254998 1078.5662899358601 72.887 2 -1.0187955818832872 0.3164023261961406 1.0 ['L1MB8_dup3477|chr3:193839654-193840532:-|1.5524176989395386|0.3003449133866926|2.37|523.0|31|1|anti-sense'] 88455 22097 QSRKPPNL True PC9_epitope_Rep3 938.5297637468199 938.52866993586 90.293 2 -1.0188761166229838 0.3164377949009397 1.0 ['ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000589582.5_1_17:74470614-74477615:-|nuORF', 'ENST00000592378.5_1_17:74475239-74483895:-|nuORF', 'ENST00000587640.1_1_17:74472910-74477606:-|nuORF'] 11597 21400 DGFFAVKHAR True NCI_RA007_Epitope_Rep5 1146.5934266325396 1146.59179490379 89.377 3 -1.019007567500841 0.3165400118945351 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5', 'ADAMTS5|p.G894Vfs*16|1|0.13|ENSG00000154736|chr21:26924165-26924165|C/-|frameshift_variant', 'ADAMTS5|p.A277Rfs*16|1|0.22|ENSG00000154736|chr21:26965563-26965563|C/-|frameshift_variant'] 109380 9364 TCWEWYWP True PC9_epitope_Rep2 1169.46405225577 1169.46241490379 41.353 3 -1.0190084877177679 0.3165400118945351 1.0 ['ENST00000409198.5_2_2:152506865-152507290:-|nuORF'] 17470 18208 EHFKKHGAE True NCI_RA007_Epitope_Rep4 1081.5304920228098 1081.52938993586 78.789 2 -1.0190199821794306 0.3165400118945351 1.0 ['ENSG00000117360|ENST00000324862|PRPF3', 'ENST00000467329.5_1_1:150316853-150325452:+|nuORF'] 833 7716 ACVVRCDP True H1975_Epitope_Rep3 861.3836937600898 861.38258993586 34.663 2 -1.0190269042264577 0.3165400118945351 1.0 ['ENSG00000174628|ENST00000695302|IQCK', 'ENST00000568300.6_1_16:19775348-19867867:+|nuORF'] 66754 9866 LSLLLGGR True H1975_Epitope_Rep1 827.52288746123 827.5217899358599 42.883 2 -1.0191416497867536 0.31657129263747735 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 84975 7158 QEETKTVL True PC9_epitope_Rep1 946.4971262058599 946.49602993586 32.344 2 -1.0191745928978597 0.31657129263747735 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 64478 22858 LPQETRWHLWL True H1975_Epitope_Rep3 1477.78301830737 1477.78192993586 95.492 2 -1.0191869465327683 0.31657195718250297 1.0 ['ENST00000310942.8_1_17:77758954-77759245:+|nuORF'] 28655 11189 FSMKLMGSL True PC9_epitope_Rep3 1012.5085599200399 1012.50746993586 48.044 2 -1.019203928156608 0.31657195718250297 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 74663 19434 NGNGHEHC True NCI_RA007_Epitope_Rep4 866.3089485967 866.30784993586 84.019 2 -1.0192195976228742 0.31657195718250297 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 29193 17153 FTRYLWPAPR True NCI_RA007_Epitope_Rep2 1305.6982260542497 1305.6971299358602 71.461 2 -1.0192386406079288 0.3165726216748378 1.0 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 16162 12823 EEDKKETENK True H1975_Epitope_Rep2 1248.5833750109598 1248.58226993586 54.432 2 -1.0192608963500747 0.3165726216748378 1.0 ['HDAC2|p.D456N|1|0.5|ENSG00000196591|chr6:113943363-113943363|C/T|missense_variant'] 59337 16404 LFKFGSHGEG True PC9_epitope_Rep5 1077.5243440132099 1077.5232499358601 68.096 2 -1.0192859024066152 0.3165726216748378 1.0 ['nc|ENSG00000110171|O75382-4|TRIM3', 'nc|ENSG00000110171|O75382-3|TRIM3', 'nc|ENSG00000110171|O75382-2|TRIM3', 'ENSG00000110171|ENST00000345851|TRIM3'] 68713 15619 LTKQCVLI True PC9_epitope_Rep6 916.5415743004799 916.54046993586 72.283 2 -1.01940612354657 0.31664838722465216 1.0 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 86457 6579 QKQISVSCS True NCI_RA007_Epitope_Rep2 978.4804305959 978.47932993586 30.202 2 -1.0194113662456274 0.31664838722465216 1.0 ['ENST00000426117.1_1_20:34194138-34195416:-|nuORF'] 93346 20167 RPWLLWVVA True NCI_RA007_Epitope_Rep2 1138.66513502082 1138.66402993586 83.47 2 -1.0194258924713424 0.31664838722465216 1.0 ['FURIN|p.V730Rfs*14|1|0.07|ENSG00000140564|chr15:90881677-90881678|-/T|frameshift_variant', 'ENSG00000140564|ENST00000268171|FURIN'] 25916 7478 FFPRLMTEL True PC9_epitope_Rep5 1152.6001518057599 1152.5985149037901 33.716 3 -1.01943479623927 0.31664838722465216 1.0 ['ENSG00000156162|ENST00000414645|DPY19L4'] 94817 14208 RSRIEILRR True NCI_RA007_Epitope_Rep4 1197.7418222017297 1197.74017490379 61.932 3 -1.0194560291817156 0.3166580779852275 1.0 ['CON__P02672'] 55284 10954 LADSKQANK True PC9_epitope_Rep3 973.51925863277 973.51816993586 47.115 2 -1.0194641922182393 0.3166580779852275 1.0 ['ENSG00000163840|ENST00000296161|DTX3L'] 83540 19587 PTVKFYFYERA True PC9_epitope_Rep1 1419.7186867153098 1419.7175899358601 80.168 2 -1.0194660665139454 0.3166580779852275 1.0 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000418559.5_1_2:183617332-183641856:+|nuORF', 'ENST00000491074.5_1_2:183616895-183641856:+|nuORF'] 70935 21116 LYGFDVLID True PC9_epitope_Rep4 1053.5382627418498 1053.53767496793 89.385 1 -1.0194704778865071 0.3166580779852275 1.0 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76198560-76243086:+|nuORF'] 101133 5975 SLGPYHKSR True NCI_RA007_Epitope_Rep5 1043.55122746739 1043.55012993586 29.666 2 -1.0195624484726444 0.3166983774641932 1.0 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant'] 138175 7557 YGNEQTASFAP True PC9_epitope_Rep5 1183.51456717515 1183.51346993586 34.017 2 -1.0195710740069248 0.3166983774641932 1.0 ['ENSG00000120094|ENST00000239174|HOXB1', 'nc|ENSG00000120094|P14653-2|HOXB1'] 10569 11098 CMLLWLIWYLK True PC9_epitope_Rep5 1480.79747171332 1480.79581490379 47.677 3 -1.0195843221704408 0.3166983774641932 1.0 ['SLC39A6|p.A691Lfs*64|1|0.31|ENSG00000141424|chr18:36111103-36111104|-/AA|frameshift_variant'] 105749 7898 SSGERWIRY True H1975_Epitope_Rep1 1152.5676058075198 1152.56650993586 35.332 2 -1.0196367783358162 0.31671643368654706 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 2940 15419 AFAQSEYTVF True PC9_epitope_Rep2 1161.53423999057 1161.5331499358601 64.588 2 -1.0196468223318702 0.31671643368654706 1.0 ['ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9', 'ENSG00000250120|ENST00000307360|PCDHA10', 'nc|ENSG00000250120|Q9Y5I2-3|PCDHA10'] 16043 7422 EDVRLIREQH True NCI_RA007_Epitope_Rep1 1293.6789471616498 1293.67729490379 32.867 3 -1.0196903007226028 0.31671709231196077 1.0 ['ENST00000564638.1_1_16:87426033-87432506:+|nuORF', 'ENST00000564844.1_1_16:87426873-87433248:+|nuORF', 'ENSG00000258102|ENST00000556529|MAP1LC3B2', 'ENSG00000140941|ENST00000268607|MAP1LC3B'] 67084 7258 LSQERPHRFED True H1975_Epitope_Rep3 1412.6796754376398 1412.6785699358602 32.891 2 -1.019703342506906 0.31671709231196077 1.0 ['ENSG00000235568|ENST00000329021|NFAM1'] 56673 21568 LDKEVRAVFL True PC9_epitope_Rep1 1188.6866583110398 1188.68556993586 87.782 2 -1.0197066630918512 0.31671709231196077 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2', 'SBF2|p.E591Nfs*13|1|0.07|ENSG00000133812|chr11:9962046-9962046|C/-|frameshift_variant'] 59258 17004 LFFKDRYFWRR True NCI_RA007_Epitope_Rep3 1632.8677509908398 1632.86664993586 74.745 2 -1.0197198053365806 0.3167261196987713 1.0 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8', 'ENSG00000166670|ENST00000279441|MMP10'] 87608 16801 QQPLRRKRR True NCI_RA007_Epitope_Rep5 1236.7639546286398 1236.76284993586 71.377 2 -1.0197521278918242 0.3167483584574124 1.0 ['ENST00000373318.6_1_2:241494422-241496622:-|nuORF', 'ENST00000272972.7_1_2:241494422-241497352:-|nuORF', 'ENST00000418505.3_1_2:241494422-241508600:-|nuORF', 'ENST00000405002.5_1_2:241494422-241500367:-|nuORF'] 63278 9728 LLSQNRAL True PC9_epitope_Rep1 913.5345147740899 913.53340993586 42.276 2 -1.019832360457421 0.3168498652433546 1.0 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 117266 14340 TVLWPRQGP True PC9_epitope_Rep2 1052.5767139392399 1052.57560993586 60.422 2 -1.0198382732180935 0.3168553575438921 1.0 ['ENST00000324685.10_1_16:30787072-30787168:+|nuORF'] 10020 17032 AYRLEPLI True PC9_epitope_Rep4 973.5596668927699 973.55856993586 73.506 2 -1.0198454392742775 0.3168553575438921 1.0 ['nc|ENSG00000100523|Q8NEL9-2|DDHD1', 'nc|ENSG00000100523|Q8NEL9-4|DDHD1', 'ENSG00000100523|ENST00000673822|DDHD1', 'ENST00000555400.1_1_14:53521153-53527951:-|nuORF', 'nc|ENSG00000100523|Q8NEL9-3|DDHD1'] 72738 21203 MNKAHGCE True NCI_RA007_Epitope_Rep5 888.3582072882399 888.35710993586 88.59 2 -1.0198506984024396 0.3168553575438921 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 95474 7188 RWLWWQPWWWK True H1975_Epitope_Rep1 1756.8779217517197 1756.87627490379 32.668 3 -1.0198601872862998 0.3168553575438921 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 24914 6962 FC[Carbamidomethyl]EC[Carbamidomethyl]DNFNC[Carbamidomethyl]DR True H1975_Epitope_Rep1 1535.5227839053198 1535.5216899358602 31.819 2 -1.0198906523433244 0.3168553575438921 1.0 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 18859 6060 ELDQQAAPV True NCI_RA007_Epitope_Rep1 969.4767251144498 969.47562993586 27.61 2 -1.0199174090236907 0.3168908029274221 1.0 ['GRIN2B|p.P1266Q|1|0.2|ENSG00000273079|chr12:13563441-13563441|G/T|missense_variant'] 6601 5588 APVSGGVGA True PC9_epitope_Rep5 713.37080349393 713.37025496793 26.497 1 -1.0199454189260144 0.31690885072655217 1.0 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 133457 16762 VVYIADLF True PC9_epitope_Rep4 938.5113197180199 938.51022993586 72.441 2 -1.019981618460386 0.31690885072655217 1.0 ['ENSG00000183862|ENST00000329903|CNGA2', 'CNGA2|p.G533Afs*28|1|0.31|ENSG00000183862|chrX:151744099-151744099|G/-|frameshift_variant', 'CNGA2|p.D239Tfs*62|1|0.57|ENSG00000183862|chrX:151743217-151743217|G/-|frameshift_variant'] 121426 11020 VEVYADADEI True PC9_epitope_Rep4 1122.5080848123798 1122.50698993586 50.164 2 -1.0200004036685906 0.3169136878814298 1.0 ['ENSG00000103549|ENST00000324685|RNF40', 'nc|ENSG00000103549|O75150-4|RNF40'] 63854 13237 LNLFTYPQHYY True H1975_Epitope_Rep3 1457.69795127073 1457.6968499358602 56.171 2 -1.0200133115961676 0.3169136878814298 1.0 ['ENSG00000099256|ENST00000320152|PRTFDC1', 'nc|ENSG00000099256|Q9NRG1-3|PRTFDC1', 'nc|ENSG00000099256|Q9NRG1-2|PRTFDC1'] 45965 11329 ISEQWTQKHFQ True NCI_RA007_Epitope_Rep1 1430.69426287262 1430.6931699358602 48.038 2 -1.020039841991172 0.31693173412237136 1.0 ['ENST00000260356.5_1_15:39887667-39888120:+|nuORF'] 129777 23507 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 103.55 3 -1.0200431111137354 0.31693173412237136 1.0 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 111785 14280 TIKPKCTV True PC9_epitope_Rep5 888.5102741722 888.50916993586 59.931 2 -1.0200548686939213 0.3169407568852784 1.0 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1', 'ENST00000536336.5_1_11:18633859-18655855:-|nuORF'] 121946 9373 VFSSPRLDWP True H1975_Epitope_Rep1 1202.6084079903399 1202.60730993586 40.962 2 -1.020190240817491 0.3170818693366444 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1', 'nc|ENSG00000160410|Q8TBC3-2|SHKBP1'] 79450 8953 PAVHKLTKRI True H1975_Epitope_Rep3 1161.73461156297 1161.73297490379 39.435 3 -1.0201995638904473 0.31708670153748614 1.0 ['nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'FGFR2|p.L776Pfs*8|1|0.06|ENSG00000066468|chr10:121479996-121479997|-/GAGG|frameshift_variant', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF'] 15406 2241 EAITAFMDHKK True H1975_Epitope_Rep3 1289.64380752289 1289.64217490379 11.987 3 -1.0202048849748262 0.31708670153748614 1.0 ['ENSG00000170684|ENST00000303809|ZNF296'] 130703 14674 VSVEILAV True PC9_epitope_Rep6 828.4956696538799 828.49456993586 68.371 2 -1.0202549892639368 0.3171047417778365 1.0 ['ENST00000569153.1_1_16:64294558-64295142:-|nuORF'] 92703 9991 RNRRFFRDFRK True NCI_RA007_Epitope_Rep4 1596.8861950196394 1596.8845349037902 45.275 3 -1.0202662082267573 0.3171047417778365 1.0 ['VN1R2|p.H390R|1|0.32|ENSG00000196131|chr19:53259544-53259544|A/G|missense_variant'] 12299 8995 DINKYMVV True NCI_RA007_Epitope_Rep4 980.50010341132 980.49900993586 41.433 2 -1.0203019571406138 0.3171137615405952 1.0 ['ENST00000392771.1_2_2:160803104-160803332:-|nuORF'] 45017 15653 IPERAFQSAF True PC9_epitope_Rep5 1164.5927579261997 1164.5916699358602 65.222 2 -1.0203391282177934 0.3171276118023087 1.0 ['TBC1D14|p.C105F|1|0.15|ENSG00000132405|chr4:6923703-6923703|G/T|missense_variant'] 81701 15659 PLMLSLPAL True PC9_epitope_Rep2 953.5619753918899 953.56086993586 65.508 2 -1.0203658599881134 0.3171276118023087 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 68758 10292 LTLELEILENP True H1975_Epitope_Rep1 1282.7020335916598 1282.7009299358601 44.532 2 -1.0203858527349507 0.3171276118023087 1.0 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-2|EIF4G3'] 603 10574 AARRGRQRPC True H1975_Epitope_Rep3 1169.6312262069298 1169.6301299358602 45.742 2 -1.02039615728548 0.31713244228432563 1.0 ['ENST00000552576.2_1_12:56123998-56124220:+|nuORF'] 32492 2148 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 11.279 2 -1.0204009398256508 0.31713244228432563 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 30466 5385 GAFVKTWLP True NCI_RA007_Epitope_Rep4 1017.5647522732098 1017.56364993586 27.28 2 -1.0204214804307488 0.31714146096649365 1.0 ['ENST00000470223.1_1_1:27661789-27661954:+|nuORF', 'nc|ENSG00000186501|Q9H0R3-2|TMEM222', 'ENST00000464720.5_1_1:27657613-27661954:+|nuORF', 'ENST00000471456.1_1_1:27660299-27661954:+|nuORF', 'ENSG00000186501|ENST00000374076|TMEM222'] 6536 17195 APTPAPFKVG True PC9_epitope_Rep4 983.5440168286299 983.54290993586 74.147 2 -1.020451063571066 0.317150479410444 1.0 ['ENST00000461141.5_1_3:183952309-183959823:+|nuORF', 'ENSG00000145198|ENST00000691901|VWA5B2'] 43103 13055 IEWRWQRSLW True NCI_RA007_Epitope_Rep1 1458.7520525322598 1458.75094993586 54.772 2 -1.0205210158108071 0.31715949761618617 1.0 ['ENST00000478564.5_1_1:151318991-151319697:-|nuORF'] 119724 8105 VAVVKKGG True NCI_RA007_Epitope_Rep4 756.4857736765198 756.48466993586 37.963 2 -1.020570794725638 0.3171907396891219 1.0 ['nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 100561 15978 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 69.39 2 -1.0205768715560544 0.3171907396891219 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 65596 21984 LRVTWLGHAT True NCI_RA007_Epitope_Rep5 1152.64037682496 1152.63874490379 91.694 3 -1.0206136303928262 0.31719975700589 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD'] 3012 20821 AFLRAGVRYQ True PC9_epitope_Rep3 1179.6512758618298 1179.65016993586 85.359 2 -1.0206395277275704 0.31720877408449216 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 123683 24279 VGRAAAAAAAV True PC9_epitope_Rep2 926.5297637468198 926.52866993586 98.932 2 -1.0207107882219177 0.3172309967777719 1.0 ['ENSG00000137815|ENST00000389629|RTF1'] 122941 23479 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 101.89 2 -1.0207599469536013 0.31729283591944535 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 33128 15300 GISGLLFIYQ True PC9_epitope_Rep5 1109.61209638845 1109.61098993586 63.861 2 -1.0207718304917945 0.3173150569157225 1.0 ['ENSG00000184544|ENST00000571134|DHRS7C', 'nc|ENSG00000184544|A6NNS2|DHRS7C'] 27279 9524 FLQKYPPP True H1975_Epitope_Rep2 988.5382031721999 988.53710993586 41.605 2 -1.0208499071335322 0.3173636879844705 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67049840-67052918:+|nuORF', 'ENST00000531390.1_1_11:67050274-67051456:+|nuORF'] 45522 14923 IQPKLSLTL True PC9_epitope_Rep4 1011.63283183303 1011.63172993586 65.342 2 -1.020952413467745 0.31740812634525745 1.0 ['nc|ENSG00000153814|Q86VZ6-3|JAZF1', 'ENSG00000153814|ENST00000283928|JAZF1'] 55561 21117 LAGSSRLRH True PC9_epitope_Rep4 995.5624608574301 995.56136993586 89.389 2 -1.0209805021103997 0.31740812634525745 1.0 ['ENST00000505306.5_1_17:48166637-48166859:+|nuORF'] 6614 13011 APVVRARA True PC9_epitope_Rep5 838.5137197598599 838.51262993586 55.054 2 -1.0210099586806 0.31742259193239586 1.0 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44'] 77769 23175 NTQISLSLYF True PC9_epitope_Rep4 1184.607739284 1184.60664993586 97.372 2 -1.0210346030492297 0.31742259193239586 1.0 ['ENST00000428388.6_1_6:32135933-32136035:+|nuORF'] 118017 10093 TYEAAQTVKG True NCI_RA007_Epitope_Rep5 1066.5294889633 1066.52838993586 45.459 2 -1.0210380514261157 0.31742259193239586 1.0 ['nc|ENSG00000159023|P11171-4|EPB41'] 13617 8240 DPHWVLTAAHC True H1975_Epitope_Rep2 1248.5709769358 1248.5693249037902 36.648 3 -1.0210515510052638 0.31742259193239586 1.0 ['nc|ENSG00000137648|Q9NRS4-4|TMPRSS4', 'nc|ENSG00000137648|Q9NRS4-2|TMPRSS4', 'nc|ENSG00000137648|Q9NRS4-3|TMPRSS4', 'ENSG00000137648|ENST00000437212|TMPRSS4'] 117211 16894 TVLLADHL True PC9_epitope_Rep1 880.5018176634801 880.50072993586 69.808 2 -1.0210806332345606 0.31742259193239586 1.0 ['ENSG00000130054|ENST00000252338|NALF2'] 105970 13452 SSSSSSSS True PC9_epitope_Rep4 714.2667919178601 714.2662449679301 59.641 1 -1.0210976303660424 0.31742259193239586 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 123392 9546 VGMPGPWGT True NCI_RA007_Epitope_Rep4 900.4163737873599 900.41526993586 43.568 2 -1.0211517261909704 0.3174670240437303 1.0 ['ENSG00000282936|ENST00000634965|unknown'] 112366 7331 TLANHMEA True H1975_Epitope_Rep3 885.4014519992099 885.40034993586 33.173 2 -1.0211678522127177 0.3174670240437303 1.0 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000552090.1_1_12:49167835-49170266:-|nuORF', 'ADCY6|p.V499L|1|0.38|ENSG00000174233|chr12:48776468-48776468|C/A|missense_variant', 'ENST00000545213.5_1_14:24798022-24799232:-|nuORF', 'ENST00000557056.5_1_14:24792528-24800258:-|nuORF', 'nc|ENSG00000129467|Q8NFM4-2|ADCY4', 'nc|ENSG00000078295|Q08462-2|ADCY2', 'ENSG00000078295|ENST00000338316|ADCY2', 'ENSG00000129467|ENST00000418030|ADCY4', 'ENSG00000173175|ENST00000462833|ADCY5', 'nc|ENSG00000173175|O95622-2|ADCY5', 'ENST00000554577.5_1_14:24791640-24799178:-|nuORF'] 21066 11317 EQVPSGPGFGE True H1975_Epitope_Rep2 1102.4931034545796 1102.49200993586 48.578 2 -1.021210446601655 0.3174760358076527 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 69887 10154 LVIHKEQDSL True PC9_epitope_Rep4 1180.6451874218799 1180.6440899358602 46.733 2 -1.0212275760317415 0.3174850473336062 1.0 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1', 'ENST00000514990.1_1_3:129288623-129290035:-|nuORF'] 58827 9933 LESRDQAW True PC9_epitope_Rep1 1003.4723084403498 1003.47120993586 43.069 2 -1.0212587656006085 0.31750726168471083 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 5884 23033 APGGTAASVA True PC9_epitope_Rep4 800.4028318982 800.4022849679301 96.818 1 -1.0212847322005543 0.31751208048374746 1.0 ['ENSG00000109705|ENST00000382438|NKX3-2'] 58283 9605 LELSWFPDT True H1975_Epitope_Rep1 1106.52842633414 1106.52732993586 41.871 2 -1.0213012527824288 0.31751208048374746 1.0 ['ENSG00000139218|ENST00000369367|SCAF11', 'SCAF11|p.H691Tfs*8|1|0.05|ENSG00000139218|chr12:45927630-45927631|-/AAAAGGTTGAAACTGT|frameshift_variant', 'SCAF11|p.S759Lfs*23|1|0.07|ENSG00000139218|chr12:45927426-45927426|A/-|frameshift_variant'] 80314 74 PGGCSCDH True H1975_Epitope_Rep1 774.24250882966 774.24140993586 0.38004 2 -1.0213322582313906 0.3175168990283059 1.0 ['ENSG00000178235|ENST00000674365|SLITRK1', 'SLITRK1|p.N408Kfs*3|1|0.05|ENSG00000178235|chr13:83880284-83880285|-/T|frameshift_variant', 'SLITRK1|p.G352E|1|0.2|ENSG00000178235|chr13:83880453-83880453|C/T|missense_variant'] 94588 24430 RRSRARRPAW True H1975_Epitope_Rep1 1310.7544525741 1310.7533499358601 101.28 2 -1.0213359079134974 0.3175168990283059 1.0 ['ENST00000368352.9_1_1:155292852-155294901:+|nuORF'] 5622 8591 ANSMVLFFK True NCI_RA007_Epitope_Rep2 1055.54738795691 1055.5462899358602 38.062 2 -1.0214500136066396 0.31756551587563536 1.0 ['ENST00000601945.1_1_19:57967019-57967581:-|nuORF', 'ENSG00000178201|ENST00000321039|VN1R1'] 3871 11754 AGYRKDLGVP True PC9_epitope_Rep2 1074.5821932425 1074.58108993586 50.544 2 -1.0214796675945326 0.3175745253874792 1.0 ['ENSG00000163395|ENST00000335211|IGFN1'] 120752 18289 VEKRLLGF True PC9_epitope_Rep5 960.5756513100798 960.57454993586 75.363 2 -1.0215761591554076 0.3176231401903706 1.0 ['ENST00000609131.1_1_9:4676681-4679417:-|nuORF'] 97597 6770 SEEVIIRDSPV True NCI_RA007_Epitope_Rep1 1242.6455813446998 1242.64448993586 30.342 2 -1.0216157736131606 0.3176453503722871 1.0 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000563753.1_1_15:73884305-73925556:-|nuORF', 'nc|ENSG00000156642|Q9Y639-4|NPTN'] 27012 8903 FLERKRRNDLR True NCI_RA007_Epitope_Rep2 1501.8589772122898 1501.8578899358602 39.257 2 -1.0216560950110678 0.3176543584733792 1.0 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL'] 131476 9133 VTKEHRERP True NCI_RA007_Epitope_Rep5 1150.6207040095398 1150.6196099358601 41.78 2 -1.0216917803387036 0.3176855751079194 1.0 ['ENSG00000130382|ENST00000252674|MLLT1'] 122235 17456 VGAPWDGP True PC9_epitope_Rep1 797.3708034939299 797.36970993586 71.942 2 -1.0216926155647206 0.3176855751079194 1.0 ['ENSG00000143127|ENST00000369304|ITGA10', 'nc|ENSG00000143127|O75578-2|ITGA10', 'ENST00000468261.1_1_1:145525044-145528351:+|nuORF'] 55994 5588 LASHHRLHTGE True NCI_RA007_Epitope_Rep5 1256.63741670284 1256.63630993586 28.182 2 -1.021769030383775 0.3177167900941217 1.0 ['nc|ENSG00000293317|Q9H963|ZNF702P', 'ENSG00000197385|ENST00000360311|ZNF860'] 74589 7970 NGFPQSDPAP True H1975_Epitope_Rep3 1028.4563240230398 1028.4552299358602 35.628 2 -1.021836082287957 0.3177167900941217 1.0 ['nc|ENSG00000249948|Q9H227|GBA3'] 112544 10563 TLEDTQQL True H1975_Epitope_Rep1 946.46074069714 946.4601949679301 45.582 1 -1.0218993932337912 0.3177785991498799 1.0 ['ENST00000380680.4_1_13:30340900-30340981:-|nuORF'] 105971 13548 SSSSSSSS True PC9_epitope_Rep4 714.2667919178601 714.2662449679301 60.007 1 -1.021956593061981 0.3177876047785625 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 110642 11603 TFVVFLVLYMI True PC9_epitope_Rep2 1343.7563180939899 1343.75467490379 49.956 3 -1.022023602441429 0.31783621099318865 1.0 ['ENSG00000221954|ENST00000335238|OR4C12'] 102780 4289 SNNDDDED True H1975_Epitope_Rep1 922.27881315354 922.27770993586 21.477 2 -1.0220635599237526 0.3178584157239595 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 79601 7858 PDKPGIPV True PC9_epitope_Rep5 821.4647038787699 821.46360993586 35.169 2 -1.0221039981780917 0.3178938197946091 1.0 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 58975 20925 LEVDCAVWL True PC9_epitope_Rep1 1046.51066809502 1046.50956993586 85.309 2 -1.0221795731180443 0.3179292229306089 1.0 ['ENST00000451492.5_1_10:75335378-75351076:-|nuORF'] 4758 10199 ALDMTRYWRQL True NCI_RA007_Epitope_Rep1 1451.73435386279 1451.7332499358602 43.684 2 -1.0222129521834968 0.31795142555438227 1.0 ['ENST00000514589.5_1_4:76407750-76415940:-|nuORF', 'ENST00000512567.5_1_4:76407750-76419412:-|nuORF', 'nc|ENSG00000163743|Q96PM5-8|RCHY1', 'nc|ENSG00000163743|Q96PM5-7|RCHY1', 'nc|ENSG00000163743|Q96PM5-6|RCHY1', 'nc|ENSG00000163743|Q96PM5-2|RCHY1', 'ENSG00000163743|ENST00000324439|RCHY1'] 32490 1169 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 6.1627 2 -1.0222606844709856 0.31800002639880676 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 64949 4164 LQEPFLMEQLP True H1975_Epitope_Rep2 1343.6795243252698 1343.6778749037899 21.118 3 -1.0222865696627157 0.31803122896400615 1.0 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 79871 3330 PEKYIELDGDR True NCI_RA007_Epitope_Rep2 1333.65139500113 1333.6497449037902 17.617 3 -1.0222880982065627 0.31803122896400615 1.0 ['nc|ENSG00000084110|P42357-2|HAL', 'ENSG00000084110|ENST00000261208|HAL'] 57063 8422 LDSGDLARF True NCI_RA007_Epitope_Rep2 992.4927095317599 992.49160993586 37.401 2 -1.0223347077773857 0.31806662794994983 1.0 ['ENSG00000162639|ENST00000651461|HENMT1'] 122626 10176 VGFTDYLP True PC9_epitope_Rep1 910.4436340810198 910.44252993586 44.018 2 -1.0223613137572682 0.31806783687475254 1.0 ['OR5AS1|p.N299Mfs*7|1|0.15|ENSG00000181785|chr11:56031310-56031310|A/-|frameshift_variant', 'ENSG00000181785|ENST00000641320|OR5AS1', 'OR5AS1|p.F104Sfs*32|1|0.12|ENSG00000181785|chr11:56030727-56030727|C/-|frameshift_variant'] 77389 15468 NSEVSHIPLLL True PC9_epitope_Rep2 1220.67648755016 1220.67538993586 64.774 2 -1.0224147169495563 0.31806783687475254 1.0 ['ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 42010 13781 IDFYLKYL True H1975_Epitope_Rep3 1073.5797336310097 1073.5786299358601 58.312 2 -1.0224384600203318 0.31806783687475254 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'nc|ENSG00000138468|Q9BQF6-4|SENP7', 'ENST00000460107.1_1_3:101056351-101059081:-|nuORF', 'ENST00000474906.2_1_6:76388527-76407234:+|nuORF', 'nc|ENSG00000112701|Q9GZR1-2|SENP6', 'ENSG00000112701|ENST00000447266|SENP6'] 18286 12707 EIRNAFDL True PC9_epitope_Rep2 976.4977949121999 976.49668993586 54.183 2 -1.0224402066479459 0.31806783687475254 1.0 ['ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 245 18540 AAGAPNLVLAA True PC9_epitope_Rep4 966.5498304850599 966.54928496793 79.389 1 -1.0224747602392392 0.31806783687475254 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 15999 7365 EDSAAERAR True NCI_RA007_Epitope_Rep1 1003.46828568907 1003.46718993586 32.643 2 -1.0224769532736766 0.31806783687475254 1.0 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 137902 9596 YEWWFRWRLDR True H1975_Epitope_Rep3 1711.8371791385496 1711.8360899358602 41.924 2 -1.0225136628006242 0.3180768367845218 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 45794 9870 ISCWKGVCVP True NCI_RA007_Epitope_Rep5 1090.53035799378 1090.5292699358602 44.611 2 -1.0226402839642854 0.31815182389273083 1.0 ['nc|ENSG00000177800|Q5T7P6|TMEM78'] 124407 12041 VGVEIQSG True NCI_RA007_Epitope_Rep2 787.4075829254699 787.40648993586 51.429 2 -1.02271362115554 0.3181962150605749 1.0 ['ENST00000374481.7_1_2:204600776-204600923:+|nuORF'] 98005 12563 SEQDFQYLRQK True NCI_RA007_Epitope_Rep2 1440.69974217588 1440.6986499358602 53.482 2 -1.0227268824649414 0.3181962150605749 1.0 ['ENSG00000135587|ENST00000258052|SMPD2'] 83648 11220 PVEAADFGERL True PC9_epitope_Rep4 1202.59315184902 1202.5920499358601 50.933 2 -1.0227435038331851 0.3182022116069779 1.0 ['ENSG00000132825|ENST00000370996|PPP1R3D'] 69000 12629 LTPRPAIAP True PC9_epitope_Rep1 934.5600012459398 934.55890993586 53.447 2 -1.0227542225164157 0.3182022116069779 1.0 ['ENST00000590444.5_1_19:6475849-6475978:-|nuORF', 'ENST00000590818.5_1_19:6475623-6475978:-|nuORF'] 100226 3363 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 18.97 2 -1.022760936630069 0.3182022116069779 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 105969 14892 SSSSSSSS True PC9_epitope_Rep1 714.2667919178601 714.2662449679301 62.102 1 -1.0227664303985677 0.3182022116069779 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 24348 5884 EYWAHTRWHHF True H1975_Epitope_Rep1 1568.7061649689997 1568.70451490379 27.703 3 -1.0227781879440463 0.3182022116069779 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2'] 58628 17614 LERADEICI True PC9_epitope_Rep3 1060.52229540788 1060.52118993586 72.939 2 -1.0227833860694155 0.3182022116069779 1.0 ['ENSG00000103479|ENST00000262133|RBL2', 'nc|ENSG00000103479|Q08999-2|RBL2', 'ENST00000562837.1_1_16:53500972-53504120:+|nuORF'] 97200 5250 SDYERLEHGT True PC9_epitope_Rep5 1205.5312798684497 1205.52964490379 25.211 3 -1.022804958751836 0.3182022116069779 1.0 ['ENSG00000133812|ENST00000256190|SBF2'] 125172 12640 VIHGFFLI True PC9_epitope_Rep3 944.5483739330799 944.54726993586 53.642 2 -1.0228229599253638 0.3182022116069779 1.0 ['SLC39A12|p.G454V|1|0.2|ENSG00000148482|chr10:17991242-17991242|G/T|missense_variant'] 13457 9218 DNEDKISIKKV True H1975_Epitope_Rep1 1287.7034305739899 1287.70177490379 40.366 3 -1.0228649299047998 0.3182244038900545 1.0 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 120078 16768 VDVCCPGP True H1975_Epitope_Rep2 788.3196965211998 788.31858993586 69.735 2 -1.0229879998911806 0.3182993771772406 1.0 ['ENST00000322954.10_1_15:71055780-71055930:-|nuORF'] 112816 14141 TLIKTFVRSQT True PC9_epitope_Rep5 1292.7452358163198 1292.7436049037901 59.404 3 -1.0230294634524961 0.3183215675925315 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B'] 81010 19163 PILERATCR True H1975_Epitope_Rep3 1057.57024865981 1057.5691499358602 80.358 2 -1.0230985251426865 0.31837014752065024 1.0 ['ENST00000357508.5_1_1:45190567-45191072:+|nuORF'] 100962 13428 SLFNSIHQV True PC9_epitope_Rep5 1043.5399940773502 1043.5388899358602 56.666 2 -1.023136993150592 0.31837133206670887 1.0 ['nc|ENSG00000079337|O95398-3|RAPGEF3', 'ENSG00000079337|ENST00000449771|RAPGEF3', 'ENST00000488250.5_1_12:48131352-48135452:-|nuORF'] 24718 6228 FANIMKMLR True PC9_epitope_Rep2 1122.60419164038 1122.60253490379 29.354 3 -1.0231728426469846 0.31837133206670887 1.0 ['TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3'] 128489 10396 VPSLVPRP True PC9_epitope_Rep1 863.52288746123 863.5217899358599 44.872 2 -1.023172964765304 0.31837133206670887 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ', 'ENST00000600632.1_1_19:15534992-15535583:-|nuORF'] 58645 16364 LERERRRTQRY True H1975_Epitope_Rep3 1561.8549544610098 1561.8538499358601 68.418 2 -1.0231796575893917 0.31837133206670887 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'nc|ENSG00000163491|Q6ZWH5-7|NEK10', 'ENST00000574215.5_1_3:27203940-27332977:-|nuORF', 'nc|ENSG00000163491|Q6ZWH5-6|NEK10', 'nc|ENSG00000163491|Q6ZWH5-5|NEK10'] 22030 7150 ESKMVIRN True H1975_Epitope_Rep3 975.51715045779 975.51604993586 32.474 2 -1.02319153293135 0.31837133206670887 1.0 ['ENSG00000143344|ENST00000360851|RGL1', 'nc|ENSG00000143344|Q9NZL6-2|RGL1'] 135765 4115 WMFHAVTL True PC9_epitope_Rep3 1003.4949584612299 1003.49386993586 20.95 2 -1.023192312279842 0.31837133206670887 1.0 ['ENSG00000085365|ENST00000621999|SCAMP1'] 79783 2364 PEDRKLKKNKK True NCI_RA007_Epitope_Rep2 1382.8357821562197 1382.83414490379 12.919 3 -1.023249632916069 0.3183935191904266 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 47644 21960 IWFLFCSVL True PC9_epitope_Rep2 1126.5885244929 1126.5874299358602 89.947 2 -1.023304711890156 0.31841570572868566 1.0 ['ENST00000409262.7_1_2:74332253-74332547:+|nuORF'] 37464 19959 GVTSQRPG True H1975_Epitope_Rep3 800.41406528824 800.41296993586 83.532 2 -1.0233469111236715 0.31842469819908964 1.0 ['ENST00000401419.7_1_22:37425582-37425828:+|nuORF'] 55841 16631 LAPPEWDWRS True PC9_epitope_Rep5 1255.5985715826298 1255.59691490379 68.977 3 -1.0233896249748242 0.31843369043221276 1.0 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000529199.1_1_11:66333209-66333615:-|nuORF', 'ENST00000527141.5_1_11:66331945-66334941:-|nuORF'] 11532 3734 DFNDFRKRHFW True NCI_RA007_Epitope_Rep2 1566.7480297809802 1566.7469299358602 19.166 2 -1.0234133209911693 0.3184384812264176 1.0 ['ENST00000512584.5_1_4:156828908-156831355:+|nuORF'] 58954 16671 LETSPRLIR True PC9_epitope_Rep5 1083.64004247179 1083.6389499358602 69.129 2 -1.0234198640043055 0.3184384812264176 1.0 ['ENSG00000118492|ENST00000397944|ADGB', 'nc|ENSG00000118492|Q8N7X0-2|ADGB'] 6189 5440 APNPRDLK True PC9_epitope_Rep1 909.5032146458099 909.50210993586 25.758 2 -1.0234597368448497 0.31844747292180636 1.0 ['nc|ENSG00000163359|P12111-4|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'ENST00000491769.1_1_2:238233419-238250825:-|nuORF'] 68707 11693 LTKQCVLI True NCI_RA007_Epitope_Rep4 916.5415743004799 916.54046993586 51.937 2 -1.0234734272911528 0.31845646437994723 1.0 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 4927 12578 ALGAESPA True NCI_RA007_Epitope_Rep1 714.35481907662 714.3542749679301 52.906 1 -1.0235151875868882 0.3185446102294165 1.0 ['ENST00000459979.2_1_2:177001364-177001583:+|nuORF'] 123274 20035 VGLLKAMYQEL True H1975_Epitope_Rep1 1263.6896950861499 1263.6885899358601 83.379 2 -1.02354720423969 0.31856679243291736 1.0 ['ENSG00000171827|ENST00000330173|ZNF570'] 20021 11937 ELYQTFQRI True PC9_epitope_Rep6 1196.61897267404 1196.61733490379 57.162 3 -1.0235777107116029 0.3185763659868612 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 72702 10468 MMLSWLLQNEP True NCI_RA007_Epitope_Rep2 1360.65192967844 1360.6508299358602 45.311 2 -1.0235916448394713 0.3185763659868612 1.0 ['ENST00000288502.8_2_9:117373626-117379440:+|nuORF'] 104143 6415 SQEPSSSADPK True NCI_RA007_Epitope_Rep5 1131.5043964142699 1131.50328993586 31.346 2 -1.0236140644240785 0.3185763659868612 1.0 ['ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-6|TXNRD1'] 131466 17837 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 75.408 2 -1.0236532170661186 0.3185763659868612 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 123761 17596 VGRIHRHL True NCI_RA007_Epitope_Rep5 986.5886160356199 986.5880649679301 74.463 1 -1.0237852572065382 0.3186207260447446 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'ENST00000511348.1_1_4:100870420-100870579:-|nuORF'] 119488 11686 VARRERAV True PC9_epitope_Rep4 955.5675462378698 955.56644993586 52.714 2 -1.0237919900795736 0.3186207260447446 1.0 ['nc|ENSG00000164403|Q2M3G4-2|SHROOM1', 'ENSG00000164403|ENST00000378679|SHROOM1'] 52760 7632 KNGLKFPT True NCI_RA007_Epitope_Rep3 903.51780208079 903.51670993586 37.148 2 -1.0238585411524816 0.31866928728778904 1.0 ['nc|ENSG00000189157|Q6ZV65-1|FAM47E', 'ENSG00000189157|ENST00000424749|FAM47E'] 79713 11771 PDTTEALR True PC9_epitope_Rep1 901.4505103666099 901.44940993586 50.15 2 -1.0239348191504651 0.3187016104567577 1.0 ['ENST00000575475.2_1_17:5185712-5281605:+|nuORF', 'nc|ENSG00000029725|Q15276-2|RABEP1', 'ENSG00000029725|ENST00000537505|RABEP1'] 112631 13054 TLFCQDGRLL True PC9_epitope_Rep4 1164.59612905448 1164.59449490379 58.107 3 -1.0239543951635006 0.3187016104567577 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 46764 10654 ITEYHREEEK True PC9_epitope_Rep1 1332.6309939097198 1332.62935490379 45.872 3 -1.0239727524154671 0.3187016104567577 1.0 ['nc|ENSG00000164175|Q9UMX9-4|SLC45A2', 'nc|ENSG00000164175|Q9UMX9-3|SLC45A2', 'ENSG00000164175|ENST00000296589|SLC45A2'] 74493 8226 NFFWKTFTSC True PC9_epitope_Rep2 1279.5695799534699 1279.56848993586 36.999 2 -1.02398796147131 0.3187016104567577 1.0 ['ENSG00000157005|ENST00000287641|SST'] 117326 5446 TVNPWNNSL True PC9_epitope_Rep1 1043.5036085686302 1043.5025099358602 25.781 2 -1.0240028968969674 0.3187016104567577 1.0 ['ENSG00000111796|ENST00000229402|KLRB1'] 15108 7509 DYWTYAGSLT True H1975_Epitope_Rep3 1175.51350454599 1175.5124099358602 33.865 2 -1.0240454318923569 0.3187016104567577 1.0 ['ENSG00000174990|ENST00000649794|CA5A'] 141149 24778 YSSSRRTTRK True PC9_epitope_Rep2 1240.6636314506798 1240.66307496793 100.99 1 -1.0240513393983441 0.3187016104567577 1.0 ['ENST00000398689.2_1_10:76415522-76415648:+|nuORF'] 138254 3526 YGYERQRDYSR True NCI_RA007_Epitope_Rep1 1491.68548909407 1491.68383490379 17.637 3 -1.0240528257017483 0.3187016104567577 1.0 ['nc|ENSG00000114541|Q9Y2L6-2|FRMD4B', 'ENSG00000114541|ENST00000398540|FRMD4B'] 135240 25246 WFIFKTIPFKI True PC9_epitope_Rep1 1438.8376796491796 1438.83658993586 101.99 2 -1.0241098417211292 0.3187237859083595 1.0 ['ENST00000334218.9_1_1:227504950-227505052:-|nuORF'] 19540 11683 ELPSSQNVSPA True H1975_Epitope_Rep1 1127.54586730343 1127.54527496793 49.928 1 -1.0241539675681464 0.31872856766024793 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 66060 5062 LSEHLYPIR True NCI_RA007_Epitope_Rep3 1126.61349337078 1126.6118549037901 26.905 3 -1.024192221930067 0.31872856766024793 1.0 ['ENST00000357103.4_1_12:1895563-1895707:+|nuORF'] 58859 10896 LESVRACQLP True H1975_Epitope_Rep3 1114.5804789903398 1114.57938993586 46.996 2 -1.0242474228763854 0.3187555227305699 1.0 ['ADAMTS3|p.P1004L|1|0.11|ENSG00000156140|chr4:72288789-72288789|G/A|missense_variant'] 113134 10334 TLPGQSLIDK True NCI_RA007_Epitope_Rep2 1070.5971746003 1070.5960699358602 44.788 2 -1.0242495621788916 0.3187555227305699 1.0 ['ENSG00000068654|ENST00000263857|POLR1A', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF'] 88468 9233 QSSKREWKPLE True NCI_RA007_Epitope_Rep2 1386.7255630008997 1386.72446993586 40.525 2 -1.02425590531596 0.3187555227305699 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 110545 12762 TFNPTTEI True NCI_RA007_Epitope_Rep3 921.4443623570099 921.44381496793 57.436 1 -1.0242684279849623 0.3187645072800169 1.0 ['ENSG00000011260|ENST00000225298|UTP18'] 27409 25200 FLWKKKLRQ True PC9_epitope_Rep1 1245.7709970716899 1245.7693649037901 101.81 3 -1.024327626167697 0.3187824756679767 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 141609 7831 YTRQERYRARP True NCI_RA007_Epitope_Rep5 1494.7803925384198 1494.77875490379 36.821 3 -1.0243412257357025 0.3187824756679767 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 103519 19648 SPRLPGSFPQL True PC9_epitope_Rep5 1197.65060715549 1197.64897490379 80.632 3 -1.0244162444491134 0.3188489891730077 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3'] 88927 7231 QVFPLFRHQDP True H1975_Epitope_Rep1 1382.7095190139398 1382.70842993586 32.824 2 -1.0244493864078246 0.3188489891730077 1.0 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8', 'SMG8|p.S115Ffs*12|1|0.29|ENSG00000167447|chr17:59210392-59210393|-/A|frameshift_variant'] 12447 7195 DIWRKKYMRWM True NCI_RA007_Epitope_Rep2 1611.8166440181099 1611.8149949037902 32.608 3 -1.0244513643629365 0.3188489891730077 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 12925 11774 DLKLTIWGPEI True PC9_epitope_Rep6 1283.7125387057097 1283.7114499358602 56.453 2 -1.0245602791476367 0.3188843465646842 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD'] 66708 22101 LSLEPWGLP True PC9_epitope_Rep2 1010.5436824754598 1010.5431749679301 90.483 1 -1.0245778032351773 0.31888606126135627 1.0 ['ENST00000461200.5_1_11:2337241-2339151:+|nuORF'] 63415 5924 LLVNDTAA True PC9_epitope_Rep2 815.43888305375 815.43778993586 28.178 2 -1.024602818601309 0.31888606126135627 1.0 ['nc|ENSG00000239474|O60662-2|KLHL41', 'ENSG00000239474|ENST00000284669|KLHL41'] 20196 7995 ENIKKKECVYF True NCI_RA007_Epitope_Rep2 1399.7169724631501 1399.7158699358602 35.729 2 -1.0246769934787505 0.31888606126135627 1.0 ['nc|ENSG00000142185|O94759-2|TRPM2', 'ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-3|TRPM2', 'TRPM2|p.D453Tfs*4|1|0.23|ENSG00000142185|chr21:44390940-44390940|G/-|frameshift_variant'] 134856 6514 VYVGICLA True NCI_RA007_Epitope_Rep3 836.4466112864799 836.44550993586 32.663 2 -1.0246885422781327 0.31888606126135627 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 123584 7810 VGPVGEPAP True PC9_epitope_Rep3 821.4283183700499 821.4272299358599 35.033 2 -1.024693527287181 0.31888606126135627 1.0 ['ENST00000574767.5_1_17:78518930-78519083:+|nuORF'] 98721 22409 SGGGGGGGGD True H1975_Epitope_Rep2 676.24124587636 676.24069496793 92.609 1 -1.024699557586441 0.31888606126135627 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 57051 5840 LDSALVVGAA True PC9_epitope_Rep6 914.5072969667399 914.50618993586 30.681 2 -1.0247050901327714 0.31888606126135627 1.0 ['ENST00000607874.1_2_X:129115199-129115295:+|nuORF'] 19003 9695 ELERRFKQQRY True PC9_epitope_Rep6 1551.82700837767 1551.8253749037901 47.68 3 -1.0247262113837796 0.31888606126135627 1.0 ['ENSG00000119919|ENST00000344586|NKX2-3', 'ENSG00000183072|ENST00000329198|NKX2-5'] 39392 11351 HKLFWYTRRPE True NCI_RA007_Epitope_Rep2 1531.8048163811097 1531.80370993586 48.744 2 -1.0247316312574022 0.31888606126135627 1.0 ['ENST00000367456.5_1_6:149700636-149718820:+|nuORF'] 138689 9443 YILRQEGTRC True NCI_RA007_Epitope_Rep1 1237.62374078465 1237.6226499358602 40.725 2 -1.024817942933748 0.31892141350210973 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 99897 19136 SILWLWLWL True NCI_RA007_Epitope_Rep4 1228.7008518231999 1228.70027496793 82.755 1 -1.0248358199966818 0.31893039385029204 1.0 ['ENST00000491383.5_1_2:86716620-86718467:+|nuORF'] 70209 14174 LVQHVQFIF True PC9_epitope_Rep2 1129.6284151589298 1129.62676490379 59.788 3 -1.0248559441886456 0.3189525592679518 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'ENST00000462984.1_1_X:70346235-70347318:+|nuORF'] 3546 6147 AGLSHGHHQYA True NCI_RA007_Epitope_Rep4 1176.5424536888402 1176.5413499358601 30.255 2 -1.025048532090188 0.3190496281841675 1.0 ['ENST00000523944.5_1_8:48889925-48890036:+|nuORF'] 60987 16725 LIEDTEDWR True PC9_epitope_Rep4 1175.5458673034298 1175.54422490379 72.301 3 -1.0250619792426878 0.3190496281841675 1.0 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 84476 5284 QAKQRAEVL True NCI_RA007_Epitope_Rep4 1041.5930922793698 1041.59198993586 26.876 2 -1.025171107525799 0.31910713814835323 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C'] 65375 23666 LRDWTPPRL True NCI_RA007_Epitope_Rep4 1152.64037682496 1152.63874490379 102.64 3 -1.025175976597179 0.31910713814835323 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47655184-47666418:-|nuORF'] 47103 10534 ITTRPNRIYMT True H1975_Epitope_Rep1 1364.7234548259198 1364.7223499358602 45.474 2 -1.0251826132808664 0.31911190802657946 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 22921 6814 EVEEFSEDDDE True H1975_Epitope_Rep3 1341.47321542529 1341.47210993586 31.163 2 -1.0251870591982948 0.31911190802657946 1.0 ['ENSG00000084463|ENST00000261167|WBP11'] 61016 8994 LIEQYELREEH True NCI_RA007_Epitope_Rep2 1457.71505788685 1457.7134249037902 39.589 3 -1.0252550347709932 0.31913406900552416 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 67073 11426 LSQDLIVADGP True H1975_Epitope_Rep1 1126.5870038394198 1126.5859099358602 48.93 2 -1.0252693682838718 0.3191430454845089 1.0 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'nc|ENSG00000119321|Q5T1M5-3|FKBP15'] 131695 10750 VTNIFYKCY True H1975_Epitope_Rep1 1149.55286726017 1149.5517699358602 46.311 2 -1.025328580738844 0.3192047566940449 1.0 ['ENST00000482541.2_1_6:100009542-100010747:-|nuORF'] 86194 5637 QIGEKMPV True H1975_Epitope_Rep2 900.4738886634799 900.47278993586 26.682 2 -1.0253959502193664 0.31925328270843223 1.0 ['nc|ENSG00000088970|Q2M2Z5-2|KIZ', 'nc|ENSG00000088970|Q2M2Z5-3|KIZ', 'nc|ENSG00000088970|Q2M2Z5-4|KIZ', 'ENSG00000088970|ENST00000619189|KIZ', 'nc|ENSG00000088970|Q2M2Z5-5|KIZ'] 46049 11154 ISGLQPPALP True NCI_RA007_Epitope_Rep5 991.5702315764698 991.56912993586 49.539 2 -1.0254599200811887 0.319275440654951 1.0 ['ENST00000528897.1_1_8:11302137-11302787:-|nuORF'] 30856 12458 GAPLHLCA True PC9_epitope_Rep1 780.39524441996 780.39414993586 52.785 2 -1.0255273564571665 0.3193898805600232 1.0 ['ENST00000531066.5_1_11:16834711-16838638:-|nuORF'] 86156 7242 QIDRHCFK True NCI_RA007_Epitope_Rep5 1045.51273378369 1045.5116299358601 34.533 2 -1.0255545635415129 0.319407825353301 1.0 ['RGS6|p.L277F|1|0.11|ENSG00000182732|chr14:72478306-72478306|G/C|missense_variant'] 104477 6034 SQLRFYWDREP True NCI_RA007_Epitope_Rep1 1495.7208119736297 1495.71916490379 27.512 3 -1.0255545674173874 0.319407825353301 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 96828 11661 SASDVFEHL True NCI_RA007_Epitope_Rep4 1003.46107505031 1003.45996993586 51.812 2 -1.02568349898348 0.31950907628827924 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF', 'ENST00000484926.1_1_2:202050494-202050848:+|nuORF'] 71352 11689 LYRKANYFF True PC9_epitope_Rep6 1220.6342288153598 1220.63257490379 56.092 3 -1.0257588739118693 0.31959292898667263 1.0 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35'] 5937 7323 APGSLLHHAS True PC9_epitope_Rep3 988.5090283022402 988.50792993586 33.174 2 -1.025790703543826 0.31959292898667263 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENST00000482620.1_1_9:135536593-135545636:-|nuORF', 'nc|ENSG00000125485|Q9H8H2-3|DDX31'] 122523 6191 VGERGTTL True PC9_epitope_Rep2 831.4450310633499 831.44392993586 29.205 2 -1.025868646441397 0.31962880455558046 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'ENST00000482899.1_1_7:150737654-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 30674 9127 GALALPMATPD True PC9_epitope_Rep1 1055.53213181559 1055.53102993586 39.959 2 -1.0258758826830352 0.31962880455558046 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 105347 24707 SRQFQYLHV True PC9_epitope_Rep4 1176.6039913162401 1176.60235490379 103.53 3 -1.0258790872353738 0.31962880455558046 1.0 ['ENSG00000125755|ENST00000245934|SYMPK'] 62883 15911 LLNIKHDET True PC9_epitope_Rep4 1081.57677350889 1081.57566993586 69.129 2 -1.0258948704970974 0.31962880455558046 1.0 ['nc|ENSG00000189180|Q06730|ZNF33A', 'ENSG00000189180|ENST00000432900|ZNF33A', 'nc|ENSG00000189180|Q06730-3|ZNF33A', 'ZNF33B|p.E550Rfs*47|1|0.18|ENSG00000196693|chr10:42593302-42593302|C/-|frameshift_variant', 'ZNF33A|p.E633Rfs*19|1|0.31|ENSG00000189180|chr10:38056021-38056021|G/-|frameshift_variant', 'ENSG00000196693|ENST00000359467|ZNF33B'] 100821 14382 SLEKQAKHLRE True H1975_Epitope_Rep1 1337.74154741821 1337.7404499358602 60.514 2 -1.0259232871979165 0.3196509543393441 1.0 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2'] 66902 16699 LSNLREHQLRL True H1975_Epitope_Rep1 1377.78408093653 1377.78298993586 69.629 2 -1.0259921906054974 0.31967310353918144 1.0 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 123040 12625 VGITSGFWIW True PC9_epitope_Rep6 1164.59678067748 1164.59512490379 60.024 3 -1.025993625473254 0.3196820710199562 1.0 ['ENSG00000157240|ENST00000287934|FZD1', 'ENSG00000180340|ENST00000315323|FZD2'] 131469 18101 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 76.427 2 -1.0260447006375981 0.31970000527231507 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 91875 14646 RKKQRRLPR True H1975_Epitope_Rep2 1236.8003401373599 1236.7987049037902 61.495 3 -1.0260495351084356 0.31970000527231507 1.0 ['ENSG00000188993|ENST00000682860|LRRC66'] 136600 15741 WWNLRRTCFRI True NCI_RA007_Epitope_Rep2 1549.8088562157297 1549.80774993586 65.946 2 -1.0261054417458368 0.31972690487801664 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 7790 7809 ASSSTMSLKKN True H1975_Epitope_Rep1 1152.58087291316 1152.5797699358602 34.991 2 -1.0261093924693812 0.31972690487801664 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22'] 60012 12146 LGKFEKNV True PC9_epitope_Rep4 933.5283667644899 933.52726993586 54.536 2 -1.026118082306207 0.31972690487801664 1.0 ['ST18|p.K902Rfs*9|1|0.48|ENSG00000147488|chr8:52126102-52126102|T/-|frameshift_variant', 'ENSG00000147488|ENST00000689386|ST18'] 12583 9148 DKYRDQYNWFF True H1975_Epitope_Rep3 1580.7048275563195 1580.70372993586 40.177 2 -1.0261606697652415 0.3197538023565385 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 82168 25425 PNQALAITK True PC9_epitope_Rep2 954.5498304850599 954.54872993586 103.48 2 -1.0262066855877217 0.3197538023565385 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 109519 5778 TDPVHLYKNWI True H1975_Epitope_Rep1 1384.71393568804 1384.71282993586 27.295 2 -1.0262153390903774 0.3197538023565385 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 33774 10953 GLKVVGGK True PC9_epitope_Rep1 756.4857736765198 756.48466993586 47.018 2 -1.0262563315169784 0.31977173282724447 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'RIMS2|p.S809Kfs*25|1|0.17|ENSG00000176406|chr8:103975486-103975487|-/A|frameshift_variant', 'nc|ENSG00000176406|Q9UQ26-5|RIMS2', 'nc|ENSG00000176406|Q9UQ26-4|RIMS2', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'ENST00000524197.1_1_6:72926891-72975792:+|nuORF', 'nc|ENSG00000079841|Q86UR5-2|RIMS1'] 42536 8884 IEEQRRNR True H1975_Epitope_Rep1 1099.5846528539898 1099.5835499358602 39.084 2 -1.0262950634578525 0.31977173282724447 1.0 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'ENST00000548151.1_1_12:32886660-32890110:+|nuORF', 'ENST00000550093.5_1_12:32884403-32890891:+|nuORF'] 98723 22581 SGGGGGGGGD True H1975_Epitope_Rep2 676.24124587636 676.24069496793 93.295 1 -1.0263095259181731 0.3197806977081329 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 57216 7910 LDVTRDSFP True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 35.4 2 -1.02632622982313 0.3198028414033053 1.0 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 71012 24160 LYILAAKTL True NCI_RA007_Epitope_Rep2 1004.6270181766 1004.62592993586 101.48 2 -1.0263692911587314 0.3198381633917158 1.0 ['ENSG00000205670|ENST00000399292|SMIM11'] 95152 19860 RVFVRNREKRR True NCI_RA007_Epitope_Rep3 1514.9018450837796 1514.90020490379 86.559 3 -1.026372124164509 0.319847127042699 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN'] 67600 13253 LSVGIKAA True PC9_epitope_Rep2 757.46978925921 757.46868993586 56.253 2 -1.026390713261715 0.31986926898696644 1.0 ['ENST00000429685.1_1_2:203044091-203044292:+|nuORF'] 21074 16482 EQVTLQDLSQL True PC9_epitope_Rep5 1272.6561460284 1272.65504993586 68.396 2 -1.0264455396368786 0.3198829792841706 1.0 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000478477.1_1_7:150775105-150776989:-|nuORF', 'ENST00000467237.5_1_7:150776545-150777049:-|nuORF', 'ENST00000482806.5_1_7:150774217-150777853:-|nuORF'] 15867 6215 EDGKESTSSDC True H1975_Epitope_Rep2 1156.4190121078002 1156.41790993586 28.875 2 -1.0264490719602961 0.3198829792841706 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 123760 18014 VGRIHRHL True NCI_RA007_Epitope_Rep1 986.5886160356199 986.5880649679301 74.209 1 -1.0264623890493594 0.3198829792841706 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'ENST00000511348.1_1_4:100870420-100870579:-|nuORF'] 105973 14726 SSSSSSSS True PC9_epitope_Rep5 714.2667919178601 714.2662449679301 61.642 1 -1.0265525221140324 0.319914081648789 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 17826 8253 EHTKLRSAP True PC9_epitope_Rep3 1037.5617921510898 1037.5606899358602 36.721 2 -1.0265639854627444 0.319914081648789 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 22416 2702 ETEKRQVK True NCI_RA007_Epitope_Rep2 1016.5614577979197 1016.56036993586 14.736 2 -1.0265801068470988 0.31992304347253153 1.0 ['ENST00000502843.5_1_4:15779904-15780093:+|nuORF'] 3428 4887 AGIVENEWK True NCI_RA007_Epitope_Rep4 1044.5240096600398 1044.52290993586 25.247 2 -1.0266317283233424 0.31994518237402486 1.0 ['nc|ENSG00000156738|P11836-2|MS4A1', 'ENSG00000156738|ENST00000345732|MS4A1'] 125102 6633 VIEQMKEQHHR True NCI_RA007_Epitope_Rep2 1433.71976642781 1433.7186699358601 30.411 2 -1.0266817119796536 0.3199541435517664 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 59259 17639 LFFKDRYFWRR True NCI_RA007_Epitope_Rep5 1632.8677509908398 1632.86664993586 74.632 2 -1.0267397844591226 0.32005534325998153 1.0 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8', 'ENSG00000166670|ENST00000279441|MMP10'] 123448 5548 VGNSVVQV True PC9_epitope_Rep1 800.43921740692 800.43812993586 26.17 2 -1.0267552305789398 0.32007747954302884 1.0 ['CDH10|p.T177N|1|0.23|ENSG00000040731|chr5:24535819-24535819|G/T|missense_variant'] 15899 14146 EDKKVRVQ True NCI_RA007_Epitope_Rep4 1000.5665431783598 1000.56544993586 61.692 2 -1.026802897868834 0.3200864386233068 1.0 ['nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14', 'CDK14|p.E170Kfs*16|1|0.71|ENSG00000058091|chr7:90790615-90790615|G/-|frameshift_variant'] 130453 12307 VSNYKILL True NCI_RA007_Epitope_Rep4 948.5644179200399 948.56332993586 54.333 2 -1.0268205866857827 0.32009117980341 1.0 ['TSHR|p.S659Y|1|0.43|ENSG00000165409|chr14:81144034-81144034|C/A|missense_variant'] 130297 12319 VSHINDNPP True PC9_epitope_Rep3 991.4723084403499 991.47120993586 52.411 2 -1.0268343625188385 0.32009117980341 1.0 ['FAT2|p.D2371H|1|0.26|ENSG00000086570|chr5:151544016-151544016|C/G|missense_variant'] 31214 14617 GCGYSGGG True NCI_RA007_Epitope_Rep5 656.2224250080799 656.22187496793 62.892 1 -1.0268374248598315 0.32010013834903484 1.0 ['ENSG00000203782|ENST00000368742|LORICRIN'] 16469 5741 EELKRSYEFY True H1975_Epitope_Rep1 1362.6455813446996 1362.64448993586 27.151 2 -1.0268791738905716 0.32010909665858545 1.0 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000546398.5_1_12:95611596-95687545:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 46568 20404 ITAHSEKILA True PC9_epitope_Rep5 1081.6131590176099 1081.61206993586 83.521 2 -1.026922404145348 0.3201312304834183 1.0 ['nc|ENSG00000122882|O95905-2|ECD', 'ENSG00000122882|ENST00000372979|ECD', 'nc|ENSG00000122882|O95905-3|ECD'] 18118 13569 EIILPIDQK True PC9_epitope_Rep5 1067.6226610721499 1067.6215699358602 57.217 2 -1.0269631444594454 0.3201928904582466 1.0 ['ENST00000260323.15_1_15:54919629-54919713:+|nuORF'] 33779 10144 GLLALRSLSL True NCI_RA007_Epitope_Rep2 1041.65462990677 1041.6535299358602 44.046 2 -1.0270442598083733 0.3202545488082847 1.0 ['ENSG00000166159|ENST00000299194|LRTM2'] 22103 13875 ESQAAKDLLYR True NCI_RA007_Epitope_Rep1 1292.67246479888 1292.6713699358602 57.991 2 -1.0270926751032388 0.3202856352353724 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 79692 16709 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.45488993586 69.277 2 -1.0271041739226132 0.3202856352353724 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 55589 11198 LAHSALSL True PC9_epitope_Rep5 810.4599528515001 810.45884993586 48.061 2 -1.0271573893473436 0.32034728992648415 1.0 ['LY6D|p.G114V|1|0.23|ENSG00000167656|chr8:142785267-142785267|C/A|missense_variant', 'ENSG00000167656|ENST00000301263|LY6D'] 92561 15608 RMKWWLFWDQR True H1975_Epitope_Rep1 1650.8241719266998 1650.82306993586 65.32 2 -1.0272367829546583 0.32039576828320354 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF'] 55309 12804 LAEAERLGP True PC9_epitope_Rep3 954.5134449763398 954.51234993586 54.273 2 -1.027245002398559 0.32040472175379425 1.0 ['ENSG00000187650|ENST00000339485|VMAC'] 22536 4162 ETHIRVPA True PC9_epitope_Rep2 921.50321464581 921.50210993586 21.319 2 -1.0272828891798904 0.32041367498847245 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 84599 5158 QDAISFDDSSK True NCI_RA007_Epitope_Rep2 1211.53061116211 1211.52950993586 24.682 2 -1.0273781030708249 0.320435802176376 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 135802 16063 WNEDLTYSGIT True H1975_Epitope_Rep2 1297.5826467349698 1297.58154993586 66.989 2 -1.02740042130097 0.3204447547657001 1.0 ['ENSG00000149927|ENST00000350119|DOC2A', 'nc|ENSG00000149927|Q14183-2|DOC2A', 'ENST00000564233.5_1_16:30020315-30023028:-|nuORF'] 23160 6369 EVLCDVHFLV True NCI_RA007_Epitope_Rep2 1172.58998104488 1172.5888899358602 29.381 2 -1.0274049074053158 0.3204537071191442 1.0 ['ENSG00000133243|ENST00000255608|BTBD2'] 117012 11359 TVHIQVNDV True PC9_epitope_Rep4 1023.53490869691 1023.53380993586 51.467 2 -1.0274354892837263 0.32046265923671763 1.0 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1'] 58178 23330 LEKVRKTQKR True PC9_epitope_Rep3 1284.79900272468 1284.7979099358602 95.018 2 -1.0275213421613294 0.32055065208799893 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 44617 12555 ILRIRSSEGRQ True H1975_Epitope_Rep3 1313.7527808082498 1313.7516899358602 53.492 2 -1.0276166923789996 0.3205906761687721 1.0 ['nc|ENSG00000254658|Q8NGG1|OR8J2'] 103631 7825 SPTLGRVTPP True H1975_Epitope_Rep2 1023.57129420563 1023.57018993586 35.048 2 -1.0276270984163332 0.3205906761687721 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 33054 14534 GILKATTP True PC9_epitope_Rep6 799.48035394291 799.47980496793 67.799 1 -1.0276494951185295 0.3205906761687721 1.0 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 89681 6108 QYYRFHEHWRF True H1975_Epitope_Rep3 1667.7745788819896 1667.7729449037902 28.506 3 -1.0276982552653187 0.32061279869325815 1.0 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 62121 7903 LLEEWLLMRFQ True NCI_RA007_Epitope_Rep2 1476.77990707288 1476.7782749037901 35.374 3 -1.0277923472395591 0.3207007837713232 1.0 ['ENST00000326685.11_1_5:148638855-148639278:+|nuORF'] 103281 9567 SPLLTFPSK True H1975_Epitope_Rep1 988.5593325396 988.55822993586 41.722 2 -1.0278130259114928 0.3207097318088413 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000484220.1_1_22:21119034-21147510:-|nuORF'] 123015 20124 VGIISIPLK True PC9_epitope_Rep2 938.6164534929 938.61534993586 82.816 2 -1.0278819967212602 0.3207276271766906 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 126668 13375 VLNVSLRSP True PC9_epitope_Rep5 983.57637958607 983.57528993586 56.463 2 -1.0278832652620193 0.3207276271766906 1.0 ['nc|ENSG00000196811|P07510-2|CHRNG', 'ENSG00000196811|ENST00000651502|CHRNG'] 122282 7459 VGAVAGIVTGV True PC9_epitope_Rep2 941.55458151233 941.55348993586 34.065 2 -1.0278923689332249 0.3207365745070404 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'nc|ENSG00000170956|P40198-3|CEACAM3', 'ENST00000415495.5_1_19:42311603-42315272:+|nuORF', 'ENSG00000170956|ENST00000357396|CEACAM3'] 59646 14064 LGACGHSR True H1975_Epitope_Rep3 799.3759059577101 799.3753549679301 59.421 1 -1.0279495304891095 0.320780811633145 1.0 ['nc|ENSG00000162636|Q5T8I3-2|EEIG2', 'ENSG00000162636|ENST00000370035|EEIG2'] 64011 12280 LPAAETWI True PC9_epitope_Rep4 899.47526856247 899.47416993586 55.052 2 -1.0279565738430205 0.320780811633145 1.0 ['ENSG00000169836|ENST00000304883|TACR3'] 12484 11933 DKDKEKDRDRD True H1975_Epitope_Rep3 1418.67498398002 1418.6738899358602 51.055 2 -1.028044148065589 0.3208513889071823 1.0 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 84980 6138 QEETKTVL True PC9_epitope_Rep4 946.4971262058599 946.49602993586 30.627 2 -1.028099112373648 0.3208513889071823 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 84005 20669 PVSVMEKSK True PC9_epitope_Rep4 1003.5372171960299 1003.5361099358599 87.661 2 -1.0281479468007375 0.3208782235334405 1.0 ['SLCO1C1|p.G330Efs*6|1|0.42|ENSG00000139155|chr12:20722015-20722015|G/-|frameshift_variant', 'SLCO1C1|p.N510Kfs*21|1|0.27|ENSG00000139155|chr12:20737251-20737252|-/A|frameshift_variant', 'nc|ENSG00000139155|Q9NYB5-4|SLCO1C1', 'nc|ENSG00000139155|Q9NYB5-2|SLCO1C1', 'ENSG00000139155|ENST00000266509|SLCO1C1', 'nc|ENSG00000139155|Q9NYB5-3|SLCO1C1'] 62651 16937 LLLGAVGTPL True PC9_epitope_Rep1 952.59571804832 952.59462993586 69.971 2 -1.0281501988384565 0.3208782235334405 1.0 ['SLCO4C1|p.G242V|1|0.19|ENSG00000173930|chr5:102270701-102270701|C/A|missense_variant'] 65170 9249 LQPVQIQSL True NCI_RA007_Epitope_Rep4 1024.59169529704 1024.5905899358602 42.429 2 -1.0281617634623859 0.3208782235334405 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000561199.5_1_14:24652794-24657993:-|nuORF'] 57616 11016 LEEDHGLFEIS True NCI_RA007_Epitope_Rep1 1287.59829679911 1287.5971899358601 46.845 2 -1.0282733591563336 0.3208961121062059 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3', 'nc|ENSG00000080200|Q68DQ2-1|CRYBG3'] 116787 18468 TVDWDEWKYYF True PC9_epitope_Rep4 1550.67179609254 1550.67068993586 79.108 2 -1.0282960746134715 0.3208961121062059 1.0 ['ENST00000411846.6_1_1:108815923-108880006:+|nuORF'] 31893 17961 GELQAQVKKNQ True PC9_epitope_Rep2 1241.67279915205 1241.67170993586 74.391 2 -1.0284070958855438 0.32098407723004385 1.0 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 25803 10405 FEYGCSCY True H1975_Epitope_Rep2 970.32009044402 970.31898993586 45.036 2 -1.028452929119887 0.3210325299618069 1.0 ['ENST00000269122.7_2_17:57724843-57724882:+|nuORF'] 81663 24520 PLLPLLLLLH True NCI_RA007_Epitope_Rep2 1140.7634520797599 1140.76180490379 103.0 3 -1.028494168839146 0.3210414718626121 1.0 ['ENST00000598875.1_1_19:44169462-44174272:-|nuORF', 'ENST00000601876.1_1_19:44171370-44174272:-|nuORF', 'nc|ENSG00000011422|Q03405-2|PLAUR', 'nc|ENSG00000011422|Q03405-3|PLAUR', 'ENSG00000011422|ENST00000340093|PLAUR'] 135046 7559 WDRWLCKNRQR True NCI_RA007_Epitope_Rep2 1559.7891834003099 1559.7875249037902 34.028 3 -1.028546827908017 0.3210767528841595 1.0 ['ENST00000491103.5_1_6:10748006-10756744:+|nuORF'] 100121 10253 SISQVAFTV True PC9_epitope_Rep3 950.5072969667399 950.50618993586 44.388 2 -1.028652563940791 0.3211252024811347 1.0 ['ENSG00000169484|ENST00000641793|OR4K14'] 117945 10151 TWWWRWPRCLR True NCI_RA007_Epitope_Rep2 1644.8248406330397 1644.8237499358602 44.073 2 -1.0287000573624736 0.32114308289984855 1.0 ['PCDHB2|p.A658Pfs*84|1|0.14|ENSG00000112852|chr5:141096760-141096760|C/-|frameshift_variant', 'ENST00000341948.6_1_5:140595634-140595910:+|nuORF'] 47033 10282 ITRLVFDP True H1975_Epitope_Rep3 959.5440168286299 959.54290993586 44.601 2 -1.0287120712801259 0.32114308289984855 1.0 ['ENSG00000114166|ENST00000263754|KAT2B'] 115995 7205 TSKSDLRSNDF True NCI_RA007_Epitope_Rep5 1268.59969378144 1268.5985899358602 34.391 2 -1.0287394023055199 0.3211520227560051 1.0 ['ENSG00000109738|ENST00000264428|GLRB'] 69338 15071 LTVLCMPGVI True PC9_epitope_Rep6 1044.5711601766 1044.5700699358601 70.024 2 -1.0287853436145191 0.3211872999986831 1.0 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9'] 58644 12753 LERELLEDYRF True NCI_RA007_Epitope_Rep1 1481.7514433955696 1481.7503499358602 53.592 2 -1.0288159446361211 0.3211962390371092 1.0 ['nc|ENSG00000250067|A6XGL0-2|YJEFN3', 'ENSG00000250067|ENST00000514277|YJEFN3'] 34428 17106 GPKAKKSGSK True NCI_RA007_Epitope_Rep3 986.5872786229398 986.58618993586 75.158 2 -1.0288798967019688 0.3212578516967566 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7'] 82725 8600 PRDYSPEL True PC9_epitope_Rep6 975.4661604307499 975.46506993586 42.888 2 -1.0289438446896308 0.3213194627337372 1.0 ['nc|ENSG00000114904|P51957-3|NEK4', 'nc|ENSG00000114904|P51957-2|NEK4', 'ENSG00000114904|ENST00000233027|NEK4'] 91077 14258 RFLSRFKTR True NCI_RA007_Epitope_Rep3 1209.70945944429 1209.70780490379 63.4 3 -1.0290029953435684 0.3213283996786979 1.0 ['ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 32489 909 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 4.7973 2 -1.0290101903517423 0.32134627286254164 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 26719 8130 FIVSFCYKF True PC9_epitope_Rep4 1152.5677890483198 1152.56668993586 38.727 2 -1.0290333647878696 0.32134627286254164 1.0 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 69747 12457 LVFGPCHP True PC9_epitope_Rep5 868.4265445482399 868.42544993586 52.916 2 -1.0290671179474153 0.32135520910144316 1.0 ['ENST00000358933.9_1_16:67906988-67910776:+|nuORF'] 102080 15261 SLRFLLMIYID True PC9_epitope_Rep5 1382.7631943795798 1382.76208993586 63.712 2 -1.029145594754873 0.3214299822239779 1.0 ['ENST00000435881.6_1_17:40723892-40724087:+|nuORF'] 113163 7815 TLPPVLPSGP True H1975_Epitope_Rep2 976.5593325396 976.55822993586 35.007 2 -1.0291813522089839 0.32145208437574063 1.0 ['ARHGEF40|p.E204V|1|0.27|ENSG00000165801|chr14:21074341-21074341|A/T|missense_variant'] 114747 9298 TQKKTKST True PC9_epitope_Rep5 920.52909504048 920.52798993586 40.715 2 -1.0292277356972115 0.3215183873388721 1.0 ['nc|ENSG00000138336|Q8NFU7-2|TET1', 'ENSG00000138336|ENST00000373644|TET1'] 114647 7409 TQEAEAEKPRK True NCI_RA007_Epitope_Rep2 1285.6626283911698 1285.66152993586 33.445 2 -1.0292286067892384 0.3215183873388721 1.0 ['ENSG00000185864|ENST00000682606|NPIPB4', 'ENSG00000169203|ENST00000550665|NPIPB12', 'ENSG00000254206|ENST00000698511|NPIPB11', 'nc|ENSG00000243716|C9JG80|NPIPB4', 'ENSG00000198064|ENST00000697092|NPIPB13', 'ENSG00000243716|ENST00000424340|NPIPB5', 'nc|ENSG00000169246|Q92617|NPIPB3', 'nc|ENSG00000169246|Q92617-6|NPIPB3', 'nc|ENSG00000169246|Q92617-5|NPIPB3', 'ENSG00000169246|ENST00000542817|NPIPB3', 'nc|ENSG00000169246|Q92617-3|NPIPB3', 'nc|ENSG00000169246|Q92617-2|NPIPB3'] 99781 25360 SIITYKLLTKK True PC9_epitope_Rep5 1306.8224235078599 1306.8213299358601 102.76 2 -1.0292418210805865 0.3215183873388721 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 67888 7244 LTATVGDTAIS True H1975_Epitope_Rep1 1047.54480467427 1047.54370993586 32.874 2 -1.0292636011308782 0.32155365371955236 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 104617 23212 SQRWRLQLRRR True PC9_epitope_Rep4 1553.9127441206497 1553.9116499358602 97.515 2 -1.0292762554036965 0.321558352643775 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 80016 20400 PFEYETPEMEK True PC9_epitope_Rep1 1398.6013335742198 1398.6002299358602 83.282 2 -1.0292838112888518 0.321558352643775 1.0 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16'] 100532 12397 SLAVFIKR True PC9_epitope_Rep1 932.5807366905199 932.5801849679301 52.546 1 -1.0293005173100411 0.32159361710531514 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 112901 6327 TLKWEQSFQKG True H1975_Epitope_Rep1 1350.6932002434598 1350.6915449037901 29.402 3 -1.0294009591225284 0.3216246461720756 1.0 ['ENST00000469070.1_1_3:119814129-119817604:+|nuORF'] 99780 24572 SIITYKLLTKK True NCI_RA007_Epitope_Rep5 1306.8224235078599 1306.8213299358601 101.99 2 -1.0294052350988325 0.3216246461720756 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 86239 14142 QILPYLYLGCA True PC9_epitope_Rep6 1252.65258130144 1252.6514899358601 66.268 2 -1.0295513072148768 0.3216730738848807 1.0 ['nc|ENSG00000164086|Q16829-2|DUSP7', 'ENSG00000164086|ENST00000495880|DUSP7'] 78763 8628 PAAIPTSA True PC9_epitope_Rep1 726.39120458534 726.39065496793 38.025 1 -1.0295891429713044 0.32168669940362565 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 46105 9963 ISHVDYPENE True NCI_RA007_Epitope_Rep2 1201.52513185885 1201.5240299358602 43.381 2 -1.0296641830737847 0.32168669940362565 1.0 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000604509.5_1_10:122659587-122664224:+|nuORF'] 102813 8023 SNNKTKHIEEE True PC9_epitope_Rep1 1327.63680756615 1327.6357099358602 35.681 2 -1.029683291492285 0.32168669940362565 1.0 ['ENSG00000173702|ENST00000616727|MUC13'] 38482 23833 HEQIRELTAS True NCI_RA007_Epitope_Rep5 1182.59929985862 1182.59764490379 99.04 3 -1.0297209756323802 0.321708794102159 1.0 ['ENST00000537553.5_1_12:30863433-30867904:-|nuORF'] 56415 7769 LDEECWFP True PC9_epitope_Rep1 1037.4164333570097 1037.4153299358602 34.705 2 -1.0298008394865694 0.3217177235686734 1.0 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH11|p.G739Afs*12|1|0.89|ENSG00000133392|chr16:15747913-15747913|G/-|frameshift_variant'] 15896 24579 EDKKQKKK True PC9_epitope_Rep2 1030.6134933707797 1030.6123899358602 100.17 2 -1.0298326987826845 0.3217398172770596 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5'] 20200 17600 ENIPAVVIE True PC9_epitope_Rep6 982.53351171458 982.53240993586 80.34 2 -1.0298401771545422 0.32174874610007503 1.0 ['ENSG00000170385|ENST00000367001|SLC30A1'] 26773 3233 FKKPMKKLFW True H1975_Epitope_Rep3 1351.7838702545098 1351.78222490379 17.096 3 -1.029891967040798 0.32177083881838764 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF'] 67794 11161 LSYYRYQLNLF True H1975_Epitope_Rep3 1478.7558005000199 1478.75470993586 48.028 2 -1.0299271999357213 0.32178915083784176 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant'] 85086 5093 QEKNPRDK True NCI_RA007_Epitope_Rep5 1013.5254066423698 1013.52430993586 26.288 2 -1.0299286160003405 0.32178915083784176 1.0 ['PGBD1|p.N447Kfs*28|1|0.14|ENSG00000137338|chr6:28301189-28301190|-/A|frameshift_variant', 'ENSG00000137338|ENST00000682144|PGBD1'] 15357 7562 EAGLAPGELQ True H1975_Epitope_Rep3 983.49237517859 983.49182496793 34.069 1 -1.0299301276633737 0.32178915083784176 1.0 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF', 'ENST00000452600.1_1_2:130988892-130989183:+|nuORF'] 114919 24939 TQTAIAAAIAL True NCI_RA007_Epitope_Rep5 1042.6022599807397 1042.60116993586 103.42 2 -1.0299532936923865 0.32178915083784176 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 12157 20682 DIEFMKRSHEK True H1975_Epitope_Rep3 1418.6976340008998 1418.69652993586 86.417 2 -1.0299575816024233 0.32178915083784176 1.0 ['ENST00000469999.1_1_7:152064752-152065184:+|nuORF'] 27206 9495 FLMDGQVRSR True NCI_RA007_Epitope_Rep4 1207.6131761009499 1207.61206993586 43.373 2 -1.030020887074113 0.32181124127945243 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'ENST00000561252.1_1_15:90768241-90768761:+|nuORF', 'ENST00000560993.1_1_15:90767112-90768514:+|nuORF'] 129350 22569 VRAGAGGVGLG True PC9_epitope_Rep2 912.5141136826799 912.5130099358599 92.305 2 -1.0300364813940115 0.32182016822208476 1.0 ['ENST00000496700.5_1_14:105953068-105953266:+|nuORF'] 84415 9860 QADPRWWRRRR True NCI_RA007_Epitope_Rep2 1581.85014386409 1581.84850490379 42.979 3 -1.030124327203974 0.32187750911508034 1.0 ['ENST00000510882.3_1_6:22569875-22570217:+|nuORF'] 127909 8166 VPGSPCLD True NCI_RA007_Epitope_Rep5 786.3581902049 786.35708993586 38.094 2 -1.0301369073506936 0.32187750911508034 1.0 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'TNS1|p.K1410Rfs*44|1|0.19|ENSG00000079308|chr2:217817793-217817793|C/-|frameshift_variant'] 4255 8316 AIDTSNLEKPL True H1975_Epitope_Rep1 1199.63976768827 1199.6386699358602 36.919 2 -1.0302050289858624 0.32189959723063155 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant', 'ROS1|p.F1354Lfs*35|1|0.3|ENSG00000047936|chr6:117356708-117356708|A/-|frameshift_variant'] 84300 7233 PYRQRWAWRTW True NCI_RA007_Epitope_Rep2 1604.8112987438797 1604.81020993586 32.755 2 -1.030226928862405 0.32193484698914115 1.0 ['ENST00000491400.5_1_6:35254110-35255623:+|nuORF', 'ENST00000469195.5_3_6:35254110-35258154:+|nuORF', 'ENST00000229405.8_1_6:35254110-35258558:+|nuORF'] 86593 16012 QLEEEACAC True PC9_epitope_Rep1 994.3735825688598 994.37248993586 66.402 2 -1.0303358342170885 0.32204906812677686 1.0 ['ENSG00000164325|ENST00000296776|TMEM174'] 3147 6970 AGDEVLEWNGK True NCI_RA007_Epitope_Rep2 1216.5724164044398 1216.5713099358602 31.732 2 -1.0303741168272305 0.3220669141067151 1.0 ['nc|ENSG00000079841|Q86UR5-10|RIMS1', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'ENST00000524197.1_1_6:72926891-72975792:+|nuORF', 'nc|ENSG00000079841|Q86UR5-2|RIMS1'] 67685 10535 LSWFNWCLP True PC9_epitope_Rep2 1164.54263692964 1164.5415299358601 45.844 2 -1.0303865462243207 0.3220669141067151 1.0 ['ENST00000477647.1_1_3:122514002-122598222:+|nuORF', 'ENSG00000138463|ENST00000261038|SLC49A4'] 14291 20810 DSTTGEQRQVV True H1975_Epitope_Rep3 1218.5840437173001 1218.5824049037901 86.935 3 -1.030398918809033 0.3220758367443636 1.0 ['nc|ENSG00000067842|Q16720-8|ATP2B3', 'nc|ENSG00000067842|Q16720-7|ATP2B3', 'nc|ENSG00000067842|Q16720-6|ATP2B3', 'nc|ENSG00000067842|Q16720-3|ATP2B3', 'nc|ENSG00000067842|Q16720-5|ATP2B3', 'nc|ENSG00000067842|Q16720-2|ATP2B3', 'nc|ENSG00000067842|Q16720-4|ATP2B3', 'ENSG00000067842|ENST00000263519|ATP2B3'] 79338 4685 PARPTLLEQV True PC9_epitope_Rep1 1122.6397081186199 1122.63805490379 22.893 3 -1.030456872905997 0.32211108186364834 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 46409 15704 ISSMNQLGGL True PC9_epitope_Rep4 1018.5117307241799 1018.51062993586 68.332 2 -1.0305580396566245 0.3221989707953304 1.0 ['nc|ENSG00000106331|O43316-2|PAX4', 'nc|ENSG00000106331|O43316|PAX4', 'ENSG00000106331|ENST00000639438|PAX4'] 42574 21481 IEFMRLTV True PC9_epitope_Rep1 1007.5473879569099 1007.54628993586 87.469 2 -1.030588378824045 0.322221052354505 1.0 ['nc|ENSG00000149488|Q8TDI7-3|TMC2', 'ENSG00000149488|ENST00000358864|TMC2'] 89334 10003 QWQQRRWRQQE True H1975_Epitope_Rep2 1627.80800426859 1627.8069099358602 43.466 2 -1.0306773077421598 0.3222915350600126 1.0 ['ENST00000416426.6_2_17:55729477-55752284:+|nuORF'] 23502 6095 EVVENNLP True NCI_RA007_Epitope_Rep2 912.4552613938799 912.45416993586 28.314 2 -1.0307022137170747 0.3222915350600126 1.0 ['nc|ENSG00000113916|P41182-2|BCL6', 'ENSG00000113916|ENST00000406870|BCL6'] 27918 17105 FQEEGTEPQR True PC9_epitope_Rep5 1219.5469299325898 1219.5458299358602 70.816 2 -1.030713897955409 0.322300454036981 1.0 ['ENST00000506646.5_1_4:431247-432385:-|nuORF'] 84976 7258 QEETKTVL True PC9_epitope_Rep1 946.4971262058599 946.49602993586 32.731 2 -1.0307444397998693 0.3223093727791962 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 100824 8512 SLELANHLFYL True NCI_RA007_Epitope_Rep4 1318.6921376143 1318.69104993586 39.536 2 -1.0307740698305443 0.32232720955940414 1.0 ['ENSG00000134627|ENST00000299001|PIWIL4'] 102886 4550 SPAKNKTTA True PC9_epitope_Rep5 916.4977949122 916.49668993586 22.568 2 -1.0307773326281888 0.32232720955940414 1.0 ['ENST00000330843.8_1_8:37730107-37730260:-|nuORF'] 101326 3382 SLIPNEDVRK True NCI_RA007_Epitope_Rep2 1169.6404363946097 1169.63878490379 17.815 3 -1.0308507948527583 0.32237136465324384 1.0 ['ENSG00000185158|ENST00000543378|LRRC37B', 'nc|ENSG00000185158|Q96QE4-2|LRRC37B', 'nc|ENSG00000185158|Q96QE4|LRRC37B', 'ENST00000579766.1_1_17:30376071-30377294:+|nuORF', 'ENST00000417404.2_1_17:28960066-28961284:+|nuORF', 'RHOT1-LRRC37B|1|fusion', 'ENST00000579094.1_1_17:30374694-30380344:+|nuORF'] 32391 2200 GFPCSQRSRRP True NCI_RA007_Epitope_Rep5 1289.64112218429 1289.63947490379 12.48 3 -1.0308571087090008 0.32237136465324384 1.0 ['ENST00000455989.1_1_7:115850593-115889085:+|nuORF', 'ENST00000461440.5_1_7:115850593-115889401:+|nuORF'] 66178 6342 LSEQVLETFHD True NCI_RA007_Epitope_Rep2 1316.62484590012 1316.6237499358601 29.275 2 -1.0308764331379947 0.32238028187548523 1.0 ['COL6A3|p.L1816F|1|0.04|ENSG00000163359|chr2:237366739-237366739|C/A|missense_variant'] 18033 11849 EIEREEKFSP True PC9_epitope_Rep3 1262.6142812164198 1262.6131899358602 50.597 2 -1.0309161380444964 0.3224375929361915 1.0 ['ENST00000460494.3_1_16:1907729-1911986:-|nuORF', 'nc|ENSG00000162039|Q8N635|MEIOB', 'ENSG00000162039|ENST00000325962|MEIOB'] 100222 12623 SIWDIRILP True PC9_epitope_Rep1 1111.63897984263 1111.6378899358601 53.424 2 -1.030928678092482 0.3224375929361915 1.0 ['ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000472061.1_1_7:99754715-99755074:-|nuORF'] 87047 9048 QNEYEEFHFRR True NCI_RA007_Epitope_Rep1 1553.7011391582098 1553.70004993586 39.197 2 -1.030973343379887 0.3224465089349159 1.0 ['ENST00000282030.5_1_18:42645023-42645323:+|nuORF'] 115958 20287 TSHQWPKQRE True H1975_Epitope_Rep2 1295.6370823496698 1295.63542490379 84.07 3 -1.030998763476193 0.322451181641139 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 56868 16472 LDPLDHRNFYS True H1975_Epitope_Rep3 1375.65206370747 1375.65096993586 68.849 2 -1.0310065082700797 0.322451181641139 1.0 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'ENST00000531732.5_1_11:12183702-12229694:+|nuORF', 'nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 87602 10797 QQPGFNCSAIP True PC9_epitope_Rep4 1160.5284434174798 1160.5267949037902 49.29 3 -1.0310243906788787 0.3224600971090964 1.0 ['TET1|p.S834A|1|0.07|ENSG00000138336|chr10:68645229-68645229|T/G|missense_variant'] 141614 10306 YTRQERYRARP True PC9_epitope_Rep4 1494.7803925384198 1494.77875490379 47.329 3 -1.0311319216922026 0.3225742782704808 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 126803 11886 VLPRDTASL True PC9_epitope_Rep1 970.54474510462 970.54364993586 50.585 2 -1.0311479431763577 0.3225831918841037 1.0 ['ENSG00000171723|ENST00000478722|GPHN', 'nc|ENSG00000171723|Q9NQX3|GPHN'] 59743 15839 LGDQPSIGLA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 65.915 2 -1.0312311775244951 0.32261842105263155 1.0 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-3|MTO1', 'ENST00000370308.8_1_6:74171496-74189568:+|nuORF'] 136208 7521 WRRWRRRRR True NCI_RA007_Epitope_Rep5 1482.8769677486198 1482.87586993586 35.613 2 -1.0312594313268912 0.3226451587437338 1.0 ['ENST00000396912.1_1_7:5085705-5085882:+|nuORF'] 10690 5512 CQWRRRQRRRV True NCI_RA007_Epitope_Rep2 1598.8912974834197 1598.88909987172 26.055 4 -1.0312617330097418 0.3226451587437338 1.0 ['ENST00000370332.5_1_1:92949124-92949509:-|nuORF'] 74297 9059 NELCLLQRAV True H1975_Epitope_Rep2 1157.6226781554901 1157.6215899358601 39.799 2 -1.0312744840869217 0.3226451587437338 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 92552 27501 RMKKKKKLLPF True PC9_epitope_Rep5 1415.91628140639 1415.91463490379 112.92 3 -1.0313632385639906 0.3226935424451345 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 10813 7863 CSLQFGLFLQW True PC9_epitope_Rep5 1340.6587293110397 1340.65762993586 35.188 2 -1.0314055068064643 0.3227550819025064 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|229|1|anti-sense'] 78810 6796 PAATPSAPAA True PC9_epitope_Rep5 852.4341320264798 852.43302993586 31.112 2 -1.0314647493004394 0.3227771491724338 1.0 ['nc|ENSG00000100354|Q9UPQ9-2|TNRC6B', 'nc|ENSG00000100354|Q9UPQ9-1|TNRC6B', 'ENSG00000100354|ENST00000454349|TNRC6B'] 25243 16810 FDIPKSVRPN True H1975_Epitope_Rep1 1171.6349570913499 1171.63386993586 70.067 2 -1.0315041090010297 0.32277756581457456 1.0 ['ENSG00000159763|ENST00000291009|PIP'] 82414 13959 PPNPPGKLLP True H1975_Epitope_Rep1 1028.6018660579198 1028.6007699358602 58.85 2 -1.031508291139923 0.32277756581457456 1.0 ['ENSG00000119403|ENST00000373896|PHF19', 'ENST00000487555.5_1_9:123623373-123629236:-|nuORF'] 33439 11849 GLALETSLSL True PC9_epitope_Rep6 1002.55972646242 1002.55862993586 56.784 2 -1.031515797980965 0.32277756581457456 1.0 ['ENST00000341567.8_1_7:66422490-66422589:+|nuORF'] 36672 1696 GVIKSPSWQRP True H1975_Epitope_Rep2 1253.6880552933699 1253.6863949037902 9.1382 3 -1.0315480538098323 0.3227996316274174 1.0 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5'] 78672 23038 NYWDELQPL True NCI_RA007_Epitope_Rep5 1176.5451390274397 1176.54349490379 95.854 3 -1.0316364503713267 0.3228085408690847 1.0 ['ENST00000503449.1_1_5:177312333-177358993:+|nuORF'] 132140 9898 VTVGPHPELR True NCI_RA007_Epitope_Rep1 1103.60874234351 1103.60764993586 42.503 2 -1.0317207357886713 0.3228700731463453 1.0 ['IBA57|p.E152G|1|0.29|ENSG00000181873|chr1:228174805-228174805|A/G|missense_variant'] 109425 18956 TDFHVDFG True NCI_RA007_Epitope_Rep5 936.3977465177599 936.39664993586 79.751 2 -1.031759694438449 0.3228921368713246 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000526258.5_1_11:66975129-66986794:+|nuORF'] 123888 18246 VGRRRRHR True NCI_RA007_Epitope_Rep4 1091.6649092937098 1091.66437496793 78.932 1 -1.031787692981182 0.32290104454442603 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 61018 10758 LIEQYELREEH True PC9_epitope_Rep6 1457.71505788685 1457.7134249037902 52.206 3 -1.0318275535235328 0.3229099519831612 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 108984 2618 TAGKSKSPPK True NCI_RA007_Epitope_Rep3 999.5712942056299 999.57018993586 14.759 2 -1.031948735688634 0.3229714796884866 1.0 ['nc|ENSG00000055070|Q7Z422-2|SZRD1'] 139314 8873 YLKLRNWQWWR True NCI_RA007_Epitope_Rep2 1647.87865002771 1647.87754993586 39.158 2 -1.031966053825874 0.32297654595440733 1.0 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000473022.1_1_22:36698592-36700051:-|nuORF', 'nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 59975 7836 LGHIIQGP True PC9_epitope_Rep2 833.47593726881 833.47484993586 35.512 2 -1.0320326490661722 0.32297654595440733 1.0 ['ENST00000380605.2_1_20:2778662-2778698:-|nuORF'] 133315 23619 VVTVIIII True NCI_RA007_Epitope_Rep3 868.5997407995999 868.59864993586 102.44 2 -1.0320385895841966 0.32297654595440733 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 141731 5839 YTWRWVWSWEW True NCI_RA007_Epitope_Rep1 1683.7622828627896 1683.76118993586 26.766 2 -1.0320386644008581 0.32297654595440733 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 65621 8583 LSAEKLTRE True H1975_Epitope_Rep1 1045.57677350889 1045.57566993586 37.942 2 -1.0320783763827457 0.32297654595440733 1.0 ['SEC24B|p.M1196Nfs*23|1|0.12|ENSG00000138802|chr4:109533679-109533680|-/A|frameshift_variant', 'nc|ENSG00000138802|O95487-2|SEC24B', 'ENSG00000138802|ENST00000265175|SEC24B', 'nc|ENSG00000138802|O95487-3|SEC24B'] 131753 13385 VTPPAPVQN True PC9_epitope_Rep5 921.4919812557699 921.49088993586 56.502 2 -1.0320997726201757 0.3229812030569696 1.0 ['ENSG00000225830|ENST00000355832|ERCC6', 'ERCC6|p.A391Qfs*14|1|0.55|ENSG00000225830|chr10:49524259-49524259|C/-|frameshift_variant', 'ERCC6|p.E432Kfs*8|1|0.1|ENSG00000225830|chr10:49524136-49524136|C/-|frameshift_variant', 'nc|ENSG00000225830|P0DP91|ERCC6'] 94778 20784 RSMHAYQRE True NCI_RA007_Epitope_Rep5 1176.54582481712 1176.54418490379 86.921 3 -1.0321098044426096 0.3229812030569696 1.0 ['ENSG00000139437|ENST00000405876|TCHP', 'ENST00000537218.1_1_12:110338138-110342619:+|nuORF'] 132674 10904 VVGGYLSP True PC9_epitope_Rep1 790.42250471362 790.42140993586 46.827 2 -1.0321199227655822 0.32299010838682524 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 100231 4014 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 21.685 2 -1.0321622556555414 0.3230168229707867 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 25228 3325 FDFWFEIFDMK True NCI_RA007_Epitope_Rep2 1523.6795243252698 1523.6778749037899 17.596 3 -1.032167595658302 0.3230168229707867 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7'] 74492 23362 NFFVFKIVIV True PC9_epitope_Rep4 1224.72706657104 1224.7254149037901 98.119 3 -1.0321835609310752 0.3230168229707867 1.0 ['nc|ENSG00000142163|Q8WZA6|OR1E3'] 48996 8847 KEFLHFLTDQF True H1975_Epitope_Rep1 1423.7136013348697 1423.71250993586 38.952 2 -1.0321916830418294 0.32302147864630604 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 78828 17549 PADLLQLVL True NCI_RA007_Epitope_Rep5 980.59063266788 980.58952993586 74.29 2 -1.0322160454349538 0.32302147864630604 1.0 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR', 'TSHR|p.P51Rfs*7|1|0.12|ENSG00000165409|chr14:80955831-80955831|C/-|frameshift_variant', 'nc|ENSG00000165409|P16473-2|TSHR', 'TSHR|p.F366Lfs*46|1|0.11|ENSG00000165409|chr14:81143153-81143153|T/-|frameshift_variant', 'nc|ENSG00000165409|P16473-3|TSHR'] 5324 5563 ALREHEKLFM True NCI_RA007_Epitope_Rep5 1272.66487732064 1272.66322490379 28.083 3 -1.0322640631156983 0.32304353544653425 1.0 ['ENSG00000058063|ENST00000323116|ATP11B', 'ENST00000490303.5_1_3:182583321-182631816:+|nuORF'] 12931 15448 DLKPHNVL True PC9_epitope_Rep3 934.52361573722 934.52250993586 64.574 2 -1.0322905465179395 0.32307874419644617 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'ENST00000479187.5_1_12:40692272-40758932:+|nuORF'] 132708 15687 VVHGTGRLG True NCI_RA007_Epitope_Rep3 894.5035489989799 894.50244993586 69.338 2 -1.0323188543741517 0.32308764730639733 1.0 ['LTR12C_dup1156|chr6:63273974-63275493:-|1.1245883398790455|0.0455730948213315|4.63|468.0|53|1|anti-sense'] 136270 4366 WSDARLHR True H1975_Epitope_Rep1 1039.53116072915 1039.5300699358602 21.787 2 -1.0323787824172568 0.32309655018215777 1.0 ['ENSG00000105523|ENST00000263266|FAM83E'] 107084 12192 SVHKFFNLLKE True PC9_epitope_Rep1 1360.7503211967598 1360.74922993586 51.754 2 -1.0324280994412065 0.3231317568456217 1.0 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.M148Vfs*8|1|0.24|ENSG00000139687|chr13:48345140-48345141|TA/-|frameshift_variant', 'RB1|p.Y239Ifs*2|1|0.41|ENSG00000139687|chr13:48360122-48360123|-/A|frameshift_variant', 'RB1|p.E237Dfs*27|1|0.13|ENSG00000139687|chr13:48360119-48360119|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF'] 57793 9050 LEERQRFQEER True H1975_Epitope_Rep3 1518.75390300706 1518.7528099358601 39.799 2 -1.0325144103487573 0.32314065890708227 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 29992 8939 FWWWFLHKFR True NCI_RA007_Epitope_Rep2 1551.7927951454296 1551.79114490379 39.396 3 -1.0325739007941563 0.3231716138195878 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENST00000558615.5_1_15:49867204-49907386:-|nuORF', 'ENSG00000166262|ENST00000299338|FAM227B'] 94110 25459 RRLPALAA True PC9_epitope_Rep5 866.5450198881398 866.54392993586 103.17 2 -1.0325797326721702 0.3231716138195878 1.0 ['ENST00000294409.2_1_1:28995295-29010143:+|nuORF'] 72217 7234 MHCCCEPG True NCI_RA007_Epitope_Rep3 878.2543364666599 878.25322993586 35.565 2 -1.0326250431961899 0.32320681764380965 1.0 ['FBN2|p.Q387H|1|0.38|ENSG00000138829|chr5:128395192-128395192|C/A|missense_variant'] 787 25047 AAVVKRTG True PC9_epitope_Rep4 800.48683630568 800.48628496793 104.9 1 -1.0326504627443203 0.32321571824984546 1.0 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000505447.5_1_4:7765494-7780765:-|nuORF'] 15601 8617 EARKYGLALDP True H1975_Epitope_Rep2 1231.6560864587498 1231.6549899358602 38.101 2 -1.0327079669255619 0.32322036795939035 1.0 ['BSN|p.G2876Dfs*18|1|0.14|ENSG00000164061|chr3:49658178-49658178|G/-|frameshift_variant', 'BSN|p.G3480Afs*7|1|0.72|ENSG00000164061|chr3:49662282-49662282|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 79401 14791 PASWVQRRLR True H1975_Epitope_Rep1 1267.7261721375899 1267.7250699358601 62.118 2 -1.032715554229678 0.32322036795939035 1.0 ['ENST00000450185.5_1_2:73228706-73298794:-|nuORF'] 100230 3936 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 21.346 2 -1.032734280797792 0.323225017424352 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 22763 7358 ETVMYPAYAK True NCI_RA007_Epitope_Rep1 1171.5583465634297 1171.55724993586 32.615 2 -1.0327401158356955 0.323225017424352 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 53256 12435 KQGKAVLL True NCI_RA007_Epitope_Rep3 855.5541875895099 855.55308993586 56.131 2 -1.0328364707581459 0.32324706748724424 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 18743 6650 ELATSRTAP True H1975_Epitope_Rep2 944.4927095317599 944.49160993586 30.487 2 -1.0328849028925569 0.3232648660021566 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3', 'SH3RF3|p.V289Cfs*69|1|0.38|ENSG00000172985|chr2:109371600-109371600|G/-|frameshift_variant'] 47105 10868 ITTRPNRIYMT True H1975_Epitope_Rep1 1364.7234548259198 1364.7223499358602 46.763 2 -1.0328990453860265 0.3232648660021566 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 81953 9549 PLTEEETR True H1975_Epitope_Rep2 973.47163973401 973.4710949679301 41.703 1 -1.0329693028628077 0.3232826635808963 1.0 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7'] 111722 18416 TIGLLVHFL True PC9_epitope_Rep5 1011.61170246563 1011.61060993586 75.857 2 -1.0329831622743728 0.3232826635808963 1.0 ['TMPRSS11A|p.S158Hfs*8|1|0.08|ENSG00000187054|chr4:67929899-67929899|G/-|frameshift_variant', 'ENSG00000185873|ENST00000332644|TMPRSS11B', 'ENSG00000187054|ENST00000508048|TMPRSS11A', 'nc|ENSG00000187054|Q6ZMR5-1|TMPRSS11A'] 109060 24027 TAKPQYLE True PC9_epitope_Rep2 948.4916469025999 948.49054993586 97.916 2 -1.03301406184642 0.32328731097961866 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1'] 49174 3027 KELQRQQWEEE True NCI_RA007_Epitope_Rep1 1501.7161205160103 1501.71393987172 15.649 4 -1.0330163824131018 0.32328731097961866 1.0 ['ENSG00000154781|ENST00000383794|CCDC174', 'CCDC174|p.T436Nfs*23|1|0.73|ENSG00000154781|chr3:14671095-14671096|-/A|frameshift_variant', 'CCDC174|p.D443Rfs*16|1|0.12|ENSG00000154781|chr3:14671111-14671112|-/C|frameshift_variant', 'ENST00000465759.1_1_3:14693292-14708492:+|nuORF'] 13104 19462 DLQPFSTYMIQ True PC9_epitope_Rep1 1341.62748875241 1341.62638993586 79.677 2 -1.0330320716363204 0.3233093581938436 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 243 19515 AAGAPNLVLAA True PC9_epitope_Rep3 966.5498304850599 966.54928496793 80.296 1 -1.0330530889073075 0.3233314048282754 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 12263 8750 DIKPEKISDP True H1975_Epitope_Rep3 1140.60265390356 1140.60154993586 38.661 2 -1.0331339067806309 0.32338864491019537 1.0 ['ENSG00000174844|ENST00000495027|DNAH12'] 129759 18262 VRRAGLGP True H1975_Epitope_Rep2 824.4980696957199 824.49696993586 75.712 2 -1.0331580389018646 0.32338864491019537 1.0 ['ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 56308 7329 LDASGPARDLV True NCI_RA007_Epitope_Rep1 1112.5825871653199 1112.5814899358602 32.502 2 -1.0332316913755943 0.32343698639142726 1.0 ['nc|ENSG00000167600|Q96SQ9-2|CYP2S1', 'ENSG00000167600|ENST00000310054|CYP2S1'] 39278 18092 HILMWTTNLEP True PC9_epitope_Rep1 1353.67510765117 1353.6734549037901 74.385 3 -1.0332899372868212 0.3235205175066069 1.0 ['ENSG00000204479|ENST00000376098|PRAMEF17', 'ENSG00000187545|ENST00000235347|PRAMEF10'] 102362 9918 SLSYHRMWMVR True NCI_RA007_Epitope_Rep1 1464.7118445964 1464.7107499358601 42.583 2 -1.0332938809025387 0.3235205175066069 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 101124 20873 SLGNGRWML True PC9_epitope_Rep5 1032.51748481096 1032.5163899358602 85.341 2 -1.03332580671664 0.32352515810094795 1.0 ['ENST00000472031.1_1_17:40118826-40125939:+|nuORF', 'ENST00000486438.1_1_17:40123824-40125939:+|nuORF', 'nc|ENSG00000173786|P09543-2|CNP', 'ENSG00000173786|ENST00000393892|CNP'] 24515 9306 FAFIMTKFRP True PC9_epitope_Rep3 1256.6739854523598 1256.67232490379 40.736 3 -1.0333341716700009 0.32352515810094795 1.0 ['nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13', 'nc|ENSG00000010165|Q8N6R0-3|METTL13', 'nc|ENSG00000010165|Q8N6R0-2|METTL13'] 67214 23304 LSRHQKAHL True PC9_epitope_Rep1 1088.6203100867199 1088.61920993586 94.427 2 -1.0334050496218556 0.3235471995792795 1.0 ['ZFP57|p.R423Gfs*10|1|0.23|ENSG00000204644|chr6:29672593-29672593|G/-|frameshift_variant', 'nc|ENSG00000204644|Q9NU63-2|ZFP57', 'ENSG00000204644|ENST00000376883|ZFP57', 'nc|ENSG00000204644|Q9NU63|ZFP57'] 94358 18974 RRRLVLNHT True NCI_RA007_Epitope_Rep3 1163.69995738975 1163.69886993586 82.919 2 -1.0334194488949524 0.3235560931357726 1.0 ['ENSG00000261587|ENST00000696146|TMEM249'] 131966 9939 VTSCFSQPL True PC9_epitope_Rep2 980.4637179025999 980.46262993586 43.561 2 -1.0334280292673297 0.32357387954721745 1.0 ['ENSG00000056586|ENST00000357244|RC3H2'] 3414 7435 AGITGTWY True H1975_Epitope_Rep3 867.4126683059098 867.41156993586 33.577 2 -1.0334327539164552 0.32357387954721745 1.0 ['CON__Streptavidin'] 12655 9570 DLDIAYKFEK True NCI_RA007_Epitope_Rep1 1240.6339540318397 1240.63231490379 41.224 3 -1.0335238929555501 0.323595919225915 1.0 ['SARAF|p.G108Efs*5|1|0.09|ENSG00000133872|chr8:30070019-30070019|C/-|frameshift_variant'] 58545 6540 LEQKVELAQ True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 30.124 2 -1.0336057789593136 0.3236311049760074 1.0 ['ENSG00000100941|ENST00000216832|PNN', 'ENST00000557680.1_1_14:39648378-39651535:+|nuORF'] 47560 5762 IVTTSNNHI True PC9_epitope_Rep1 997.5192586327701 997.51816993586 26.98 2 -1.0336663400774904 0.3236531433229038 1.0 ['nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'ENST00000442459.2_1_1:16342077-16343748:-|nuORF'] 112458 15769 TLDFTSQFG True NCI_RA007_Epitope_Rep2 1014.4658260775799 1014.4652749679301 66.056 1 -1.0337947968713455 0.3236972182783825 1.0 ['SHANK1|p.L1458Sfs*16|1|0.67|ENSG00000161681|chr19:50667588-50667588|G/-|frameshift_variant', 'nc|ENSG00000161681|Q9Y566-3|SHANK1', 'ENSG00000161681|ENST00000293441|SHANK1', 'nc|ENSG00000161681|Q9Y566-2|SHANK1'] 302 3999 AAHHAQVR True NCI_RA007_Epitope_Rep4 888.4678321965999 888.46672993586 21.635 2 -1.0338294844024445 0.3236972182783825 1.0 ['ENST00000571376.1_1_17:1518302-1531133:-|nuORF'] 36498 20034 GVGLSLGLLLQ True PC9_epitope_Rep3 1068.6542955536 1068.6531899358602 82.31 2 -1.0338959071175247 0.32371499934271064 1.0 ['ENSG00000174804|ENST00000531380|FZD4'] 113356 19961 TLRRRLKVY True NCI_RA007_Epitope_Rep5 1203.7564096367098 1203.75475490379 83.694 3 -1.0339001199743438 0.32371499934271064 1.0 ['ENSG00000198933|ENST00000578982|TBKBP1', 'nc|ENSG00000198933|A7MCY6-2|TBKBP1'] 9378 10964 AVSLEWMSLWF True H1975_Epitope_Rep3 1367.65839495787 1367.65728993586 47.261 2 -1.0339359341279948 0.32372388952426023 1.0 ['RTTN|p.G1342V|1|0.45|ENSG00000176225|chr18:70092683-70092683|C/A|missense_variant'] 123077 16701 VGKGIPSL True PC9_epitope_Rep4 769.46978925921 769.4692449679301 72.213 1 -1.0339538630982523 0.32372426847543184 1.0 ['ENST00000373095.5_1_9:130716150-130742615:-|nuORF'] 59549 15854 LFSVWSVLP True PC9_epitope_Rep5 1046.58006798418 1046.5789699358602 65.973 2 -1.0339583958879142 0.32372426847543184 1.0 ['ENST00000558084.5_1_7:151927011-151927098:-|nuORF'] 18397 4791 EIVADTFR True NCI_RA007_Epitope_Rep2 949.48689587533 949.48578993586 23.266 2 -1.0339672599098577 0.32372426847543184 1.0 ['ENST00000480913.5_1_6:31695016-31697893:-|nuORF', 'ENSG00000213722|ENST00000375789|DDAH2'] 127209 6369 VLVRTEDVAPA True H1975_Epitope_Rep1 1168.6451874218799 1168.6440899358602 29.56 2 -1.0340388394568805 0.32374204742625795 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 58013 9168 LEHLRELQP True PC9_epitope_Rep2 1133.61930702721 1133.61820993586 40.602 2 -1.0340645734517266 0.32374204742625795 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 112611 4610 TLETKALN True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 25.048 2 -1.0340832413580412 0.3237772257055352 1.0 ['nc|ENSG00000106701|Q9BXM9-2|FSD1L', 'ENSG00000106701|ENST00000481272|FSD1L'] 123020 22780 VGIKGRRGDRR True PC9_epitope_Rep4 1268.7537838677597 1268.7526899358602 95.844 2 -1.0340916003679266 0.32379925865559034 1.0 ['ENST00000525051.5_1_8:144875319-144875475:-|nuORF'] 48998 8992 KEFLHFLTDQF True H1975_Epitope_Rep3 1423.7136013348697 1423.71250993586 39.583 2 -1.0341520457386195 0.3238081467947791 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 124397 9537 VGVCGWLVPP True NCI_RA007_Epitope_Rep3 1025.5368232732096 1025.5357299358602 44.601 2 -1.0341901887731606 0.32381740993388797 1.0 ['ENST00000521988.5_2_8:93966716-93978353:-|nuORF', 'ENST00000519069.5_1_8:93933857-93978353:-|nuORF', 'ENST00000537541.1_2_8:93929192-93978353:-|nuORF', 'ENST00000522903.5_3_8:93972871-93978353:-|nuORF'] 20268 11200 ENQELKDSC True PC9_epitope_Rep4 1064.44443901 1064.4433499358602 50.858 2 -1.0342299709523315 0.32381740993388797 1.0 ['nc|ENSG00000136436|Q13137-5|CALCOCO2', 'ENSG00000136436|ENST00000258947|CALCOCO2', 'nc|ENSG00000136436|Q13137-3|CALCOCO2', 'nc|ENSG00000136436|Q13137-4|CALCOCO2'] 5128 5631 ALLNLPAVP True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 29.14 2 -1.0342346563395333 0.32381740993388797 1.0 ['DBX2|p.A28V|1|0.5|ENSG00000185610|chr12:45050845-45050845|G/A|missense_variant'] 57211 12805 LDVSTTIYN True H1975_Epitope_Rep3 1024.5076908895599 1024.5065899358601 54.472 2 -1.0342388868349557 0.32381740993388797 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2'] 98580 6585 SFRSESRP True NCI_RA007_Epitope_Rep4 964.47264279352 964.47154993586 31.955 2 -1.0342566385054348 0.32383944061826403 1.0 ['ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3'] 82024 9219 PLVRLEDL True NCI_RA007_Epitope_Rep4 953.55458151233 953.55348993586 42.311 2 -1.034309811144767 0.3238749868573231 1.0 ['ITPR3|p.E540D|1|0.36|ENSG00000096433|chr6:33667197-33667197|G/T|missense_variant'] 53972 19174 KTYLYWYLQK True NCI_RA007_Epitope_Rep3 1404.7441731871597 1404.7425149037902 83.72 3 -1.0343213821839268 0.3238749868573231 1.0 ['nc|ENSG00000243264|A0A075B6S2|IGKV2D-29', 'ENST00000521304.1_1_2:89533689-89534392:-|nuORF', 'nc|ENSG00000253998|A2NJV5|IGKV2-29'] 69389 16331 LTWFINKFRIV True NCI_RA007_Epitope_Rep1 1435.83399125107 1435.83288993586 67.635 2 -1.0343341162617687 0.3238749868573231 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 43833 15256 IHSLEQIP True PC9_epitope_Rep1 935.5076313199099 935.50652993586 63.502 2 -1.0343349718328838 0.3238749868573231 1.0 ['ENST00000395496.5_1_6:32136507-32136903:-|nuORF'] 125934 10063 VLDDRSLP True PC9_epitope_Rep3 913.48689587533 913.48578993586 43.663 2 -1.0343579821375914 0.3238796162439217 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2'] 43643 5160 IHAFDLNSD True NCI_RA007_Epitope_Rep2 1030.47197408718 1030.47086993586 24.69 2 -1.0343700179534234 0.3238796162439217 1.0 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 12144 14893 DIDVVKDPV True PC9_epitope_Rep5 998.5284263341399 998.5273299358599 62.289 2 -1.0344403628063819 0.32388850192532626 1.0 ['ENSG00000092850|ENST00000207457|TEKT2'] 69967 8641 LVLLAQLGP True NCI_RA007_Epitope_Rep1 922.5851533646199 922.58404993586 37.613 2 -1.0345626336922589 0.3239236713452137 1.0 ['ENSG00000090006|ENST00000396819|LTBP4'] 5258 12329 ALPRTAAVVA True PC9_epitope_Rep2 967.5814649665098 967.58036993586 52.736 2 -1.0345635344151 0.3239282992088732 1.0 ['ENST00000552885.2_1_12:80328990-80329323:+|nuORF'] 127583 6003 VNTGLSLW True PC9_epitope_Rep1 888.4705175352 888.46942993586 27.906 2 -1.0345779226915577 0.3239282992088732 1.0 ['ENST00000500148.6_1_5:80597318-80597354:-|nuORF'] 96977 4572 SAYEPNDHSRY True H1975_Epitope_Rep3 1337.56364262589 1337.56254993586 22.707 2 -1.0346491913468199 0.32398974965503646 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'nc|ENSG00000155367|Q5JR12-2|PPM1J'] 105891 8943 SSPVTTTDML True PC9_epitope_Rep2 1050.49032657326 1050.48922993586 39.757 2 -1.0346601287772594 0.3240117746005046 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant'] 106042 7287 SSYVFYWRDYF True H1975_Epitope_Rep2 1531.67721582615 1531.67610993586 32.967 2 -1.0348298417458732 0.3241083865541801 1.0 ['ENSG00000113272|ENST00000231198|THG1L'] 92548 27697 RMKKKKKLLPF True PC9_epitope_Rep1 1415.91628140639 1415.91463490379 113.57 3 -1.0348444794734677 0.3241083865541801 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 102000 12438 SLQPQQQQQR True H1975_Epitope_Rep3 1239.63199696923 1239.63088993586 53.034 2 -1.0348907295606533 0.3241350310771212 1.0 ['ENSG00000139597|ENST00000380130|N4BP2L1', 'nc|ENSG00000139597|Q5TBK1-2|N4BP2L1'] 57049 5809 LDRYWAVSR True NCI_RA007_Epitope_Rep2 1164.60399131624 1164.60235490379 27.214 3 -1.0349069368523527 0.3241350310771212 1.0 ['ENSG00000274286|ENST00000620793|ADRA2B'] 114217 17057 TPLTPRPFLP True PC9_epitope_Rep1 1137.65462990677 1137.65299490379 70.436 3 -1.0349245535562863 0.3241350310771212 1.0 ['ENST00000427500.7_1_1:155209712-155209820:-|nuORF'] 43268 19908 IFREDYSI True PC9_epitope_Rep2 1041.51311062317 1041.51200993586 81.972 2 -1.034989090559996 0.32417907309830096 1.0 ['ENSG00000174243|ENST00000308025|DDX23'] 126954 10324 VLRKLLKKGPK True PC9_epitope_Rep2 1278.8863611770996 1278.8847149037902 45.039 3 -1.0349948578532022 0.32417907309830096 1.0 ['GPR75-ASB3|p.R34Pfs*7|1|0.43|ENSG00000115239|chr2:53765477-53765478|-/T|frameshift_variant'] 100229 3607 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 19.981 2 -1.035037567874995 0.3242273730684327 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 6586 7967 APVMARWPPF True H1975_Epitope_Rep1 1170.6008205121 1170.59972993586 35.594 2 -1.035054158221639 0.32423199222137544 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P1343Lfs*68|1|0.26|ENSG00000198753|chrX:153774974-153774974|C/-|frameshift_variant'] 4568 14855 AKMYAVDT True H1975_Epitope_Rep1 897.42660411789 897.4260549679301 62.371 1 -1.0350725148136326 0.32423199222137544 1.0 ['ENSG00000113946|ENST00000264734|CLDN16'] 31850 10924 GEKPYSCGEC True NCI_RA007_Epitope_Rep5 1071.40013166987 1071.3990299358602 48.659 2 -1.0351260427700786 0.32428028959228455 1.0 ['ZNF229|p.Q514Sfs*306|1|0.25|ENSG00000278318|chr19:44429242-44429242|C/-|frameshift_variant', 'nc|ENSG00000278318|Q9UJW7-2|ZNF229', 'ENSG00000278318|ENST00000614049|ZNF229'] 57520 10425 LEDNRNWYQSM True NCI_RA007_Epitope_Rep1 1454.62486298346 1454.62376993586 44.534 2 -1.0352207055999505 0.3243726185783734 1.0 ['nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B', 'nc|ENSG00000184588|Q07343-4|PDE4B', 'nc|ENSG00000184588|Q07343-2|PDE4B'] 20666 12962 EQAQQIRLQAE True NCI_RA007_Epitope_Rep2 1312.6735274280397 1312.67242993586 55.043 2 -1.035227703376281 0.3243726185783734 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 115807 8447 TSDPLELQ True H1975_Epitope_Rep3 901.43927697657 901.43816993586 37.475 2 -1.035233558953198 0.3243726185783734 1.0 ['ENST00000304045.6_1_19:51480794-51487328:-|nuORF'] 19627 7156 ELQSGEHAPDL True H1975_Epitope_Rep3 1194.55168095986 1194.5505899358602 32.498 2 -1.035255858547199 0.3243772335505571 1.0 ['ENSG00000179715|ENST00000546455|PCED1B'] 30941 16728 GARKQRRPF True NCI_RA007_Epitope_Rep3 1114.6471935408997 1114.6460899358601 73.635 2 -1.0352594179926038 0.3243772335505571 1.0 ['ENST00000573622.1_1_12:9795539-9795680:+|nuORF'] 6296 10398 APRKVYRYIHY True NCI_RA007_Epitope_Rep2 1464.79900272468 1464.7979099358602 45.037 2 -1.0352998870594847 0.324399248485804 1.0 ['ENST00000271469.7_2_1:162531513-162535849:+|nuORF'] 122231 10394 VGAPSPAISL True NCI_RA007_Epitope_Rep4 910.51238234718 910.5118349679301 46.834 1 -1.0353423484804654 0.3244212628425782 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 44929 2615 INVEQAFQT True NCI_RA007_Epitope_Rep5 1048.5189242795998 1048.5178299358602 14.748 2 -1.035377834169647 0.3244436270001839 1.0 ['ENSG00000075785|ENST00000265062|RAB7A'] 64492 12993 LPQPHKVL True PC9_epitope_Rep5 930.56508662638 930.56398993586 54.987 2 -1.03538538733401 0.3244436270001839 1.0 ['ENST00000462422.5_1_1:246216281-246670414:-|nuORF'] 65201 14539 LQRLLLDAR True PC9_epitope_Rep3 1096.6716769532397 1096.6705699358602 61.046 2 -1.035394312357414 0.3244436270001839 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 55593 12799 LAIAGTLK True PC9_epitope_Rep1 785.50108938749 785.49998993586 54.105 2 -1.035403151448807 0.3244436270001839 1.0 ['ENSG00000100412|ENST00000216254|ACO2'] 79216 5015 PAPLRAAPA True PC9_epitope_Rep6 862.5024863698198 862.50138993586 26.914 2 -1.0354309212045794 0.324478776652347 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 89824 23426 RAMVAFLDCM True H1975_Epitope_Rep1 1155.5238927143498 1155.52225490379 97.355 3 -1.035456016959551 0.3244791256141457 1.0 ['ENSG00000196289|ENST00000419583|BECN2'] 125684 26274 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 106.86 2 -1.03545774682688 0.3244791256141457 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 13703 14927 DPSVTSKVGT True PC9_epitope_Rep5 989.50293986229 989.50184993586 62.422 2 -1.0354723463170419 0.3244791256141457 1.0 ['ENST00000534629.1_1_15:43231619-43231877:-|nuORF'] 133108 4484 VVQLLLKPVL True PC9_epitope_Rep1 1120.7583666993198 1120.7572699358602 22.131 2 -1.0355217539975257 0.3244879996847208 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 125686 23539 VKMMKLHL True PC9_epitope_Rep6 998.5769142633799 998.57580993586 103.69 2 -1.035566571966309 0.3245320197044335 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 79758 14586 PEASRQRF True PC9_epitope_Rep2 989.5042772749699 989.50318993586 61.373 2 -1.0355748092204702 0.3245320197044335 1.0 ['nc|ENSG00000121903|P17040-3|ZSCAN20', 'ENSG00000121903|ENST00000684572|ZSCAN20', 'nc|ENSG00000121903|P17040-4|ZSCAN20'] 100228 3525 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 19.647 2 -1.0356011560682445 0.32454089273047315 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 110832 15993 TGPRAFRV True PC9_epitope_Rep3 902.50863437942 902.50752993586 66.661 2 -1.03560529901184 0.3245412392123895 1.0 ['SOX30|p.S163F|1|0.43|ENSG00000039600|chr5:157651591-157651591|G/A|missense_variant'] 46463 7739 ISVAIRTLK True H1975_Epitope_Rep1 999.64406522307 999.64296993586 34.731 2 -1.0356248933142342 0.3245412392123895 1.0 ['EPHA3|p.K653R|1|0.15|ENSG00000044524|chr3:89419274-89419274|A/G|missense_variant'] 38295 6143 HEFLFHYFGSY True NCI_RA007_Epitope_Rep2 1445.6404363946099 1445.63878490379 28.504 3 -1.0356275923979354 0.3245412392123895 1.0 ['ARSF|p.C449F|1|0.45|ENSG00000062096|chrX:3110208-3110208|G/T|missense_variant'] 66698 10477 LSLDTGYRAP True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 45.616 2 -1.0356517018783293 0.32456324707736767 1.0 ['ENSG00000159871|ENST00000377950|LYPD5', 'nc|ENSG00000159871|Q6UWN5-2|LYPD5'] 22978 8130 EVETREKEP True H1975_Epitope_Rep1 1115.54586730343 1115.5447699358601 36.21 2 -1.035873938409624 0.3246903363938474 1.0 ['nc|ENSG00000104221|Q9HAW0-2|BRF2', 'ENSG00000104221|ENST00000220659|BRF2'] 58372 21416 LENLHLRKRWK True PC9_epitope_Rep3 1491.87865002771 1491.87754993586 87.668 2 -1.0358917576216156 0.324699206641097 1.0 ['ENST00000575471.2_1_16:31925765-31927799:+|nuORF', 'ENSG00000185947|ENST00000300870|ZNF267'] 27950 15866 FQEMDLNDNW True PC9_epitope_Rep4 1310.5237519598597 1310.52264993586 68.959 2 -1.0359468120586992 0.3247606162899137 1.0 ['FKBP14|p.D152N|1|0.1|ENSG00000106080|chr7:30019019-30019019|C/T|missense_variant'] 80780 6987 PHKRSHRHRGK True H1975_Epitope_Rep2 1394.78681533154 1394.78515490379 31.799 3 -1.0359540903696671 0.32476555727757495 1.0 ['ENSG00000140986|ENST00000268661|RPL3L'] 18947 15394 ELEKEFHY True H1975_Epitope_Rep1 1093.50802524273 1093.5069299358602 64.482 2 -1.0359892081883617 0.32476555727757495 1.0 ['HOXB6|p.L183Cfs*3|1|0.13|ENSG00000108511|chr17:48596541-48596541|G/-|frameshift_variant', 'ENSG00000108511|ENST00000225648|HOXB6', 'HOXA5|p.F216Y|1|0.27|ENSG00000106004|chr7:27142001-27142001|A/T|missense_variant', 'ENST00000567101.2_1_17:46685206-46710927:-|nuORF', 'ENSG00000260027|ENST00000239165|HOXB7', 'ENSG00000198353|ENST00000430889|HOXC4', 'nc|ENSG00000113722|P47902-2|CDX1', 'ENSG00000113722|ENST00000231656|CDX1', 'ENSG00000165556|ENST00000381020|CDX2', 'ENSG00000182742|ENST00000332503|HOXB4'] 59281 15874 LFGFYFCMPL True H1975_Epitope_Rep2 1236.5711601766 1236.5700699358601 66.259 2 -1.035995973933445 0.32476555727757495 1.0 ['ENSG00000151617|ENST00000651419|EDNRA', 'nc|ENSG00000151617|P25101-5|EDNRA', 'nc|ENSG00000151617|P25101-4|EDNRA'] 92604 24373 RMSKRMCVL True NCI_RA007_Epitope_Rep5 1122.58241064998 1122.58075490379 101.22 3 -1.0359998665426449 0.32476555727757495 1.0 ['ENSG00000198128|ENST00000359959|OR2L3'] 64250 24233 LPHFPATPWFL True H1975_Epitope_Rep3 1324.6968290719199 1324.69572993586 100.95 2 -1.0360063352778182 0.32476555727757495 1.0 ['ENST00000569796.1_1_16:2278422-2280215:+|nuORF'] 56918 13578 LDQFERQLPLS True PC9_epitope_Rep1 1344.70376492716 1344.70266993586 57.084 2 -1.0360880932720573 0.32480529543872555 1.0 ['nc|ENSG00000170579|O14490-7|DLGAP1', 'ENSG00000170579|ENST00000315677|DLGAP1'] 60401 11083 LGTLQRWR True PC9_epitope_Rep3 1028.5879473292798 1028.58684993586 47.629 2 -1.0360911542316598 0.32480529543872555 1.0 ['ENST00000252699.6_1_19:39220957-39221242:+|nuORF'] 124604 12055 VGVVRKYL True PC9_epitope_Rep1 932.5807366905199 932.5801849679301 51.228 1 -1.0360960920263773 0.32480529543872555 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 68610 14388 LTHSGDKPF True PC9_epitope_Rep4 1000.4977949122 1000.49668993586 63.253 2 -1.0361590901964361 0.32485356307950936 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'nc|ENSG00000139154|Q6ZN18|AEBP2', 'ENSG00000139154|ENST00000266508|AEBP2', 'nc|ENSG00000139154|Q6ZN18-3|AEBP2'] 135937 15084 WPWLRWWQELW True NCI_RA007_Epitope_Rep2 1684.83030285296 1684.82920993586 63.36 2 -1.0362040666369046 0.3249106955242698 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 109285 11149 TAVIVGTIL True H1975_Epitope_Rep2 885.55351888317 885.55242993586 47.922 2 -1.0362424724403319 0.3249106955242698 1.0 ['ENST00000502864.5_1_5:36608606-36630112:+|nuORF', 'SLC1A3|p.P233Qfs*6|1|0.11|ENSG00000079215|chr5:36677020-36677020|C/-|frameshift_variant', 'nc|ENSG00000079215|P43003-2|SLC1A3', 'ENSG00000079215|ENST00000265113|SLC1A3'] 83897 6668 PVPSWWQTGAR True PC9_epitope_Rep4 1283.6411051009502 1283.63944490379 32.823 3 -1.0362634225496232 0.3249372923424429 1.0 ['ENST00000267425.7_1_14:24769093-24769264:+|nuORF'] 89350 16735 QWRRRPALR True NCI_RA007_Epitope_Rep4 1237.7268408439297 1237.7257499358602 72.555 2 -1.0362780185452192 0.3249372923424429 1.0 ['ENST00000240139.9_1_8:22298692-22298875:+|nuORF'] 385 23032 AALAWRRAPE True H1975_Epitope_Rep1 1139.6199757335498 1139.6188699358602 95.783 2 -1.0362806457994458 0.3249372923424429 1.0 ['ENST00000295878.7_1_3:113729745-113729820:-|nuORF'] 3377 4545 AGHINFSFSR True PC9_epitope_Rep6 1134.5570411238202 1134.55540490379 24.736 3 -1.0363020838846557 0.3249418902415002 1.0 ['ENST00000266659.7_2_12:75893342-75893732:+|nuORF'] 18500 11490 EKGGKNRSK True H1975_Epitope_Rep1 1002.5570411238199 1002.55594993586 49.179 2 -1.036309447213765 0.3249418902415002 1.0 ['ENSG00000170677|ENST00000397942|SOCS6'] 100786 6888 SLEEVKELLNK True NCI_RA007_Epitope_Rep5 1300.7238316654 1300.7227299358601 33.175 2 -1.036384989686993 0.3250295469468155 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 66144 7216 LSENNFMDI True H1975_Epitope_Rep1 1081.47501086229 1081.47390993586 32.767 2 -1.0364270305671073 0.32503414224183214 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-3|PIEZO2'] 102052 4500 SLQWRHRWDTP True PC9_epitope_Rep3 1480.7323797168397 1480.73074490379 22.402 3 -1.036511207753581 0.32503414224183214 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 43232 9518 IFLGLLDFFMP True H1975_Epitope_Rep3 1311.6937178374299 1311.6926299358602 41.616 2 -1.0366208831204482 0.3250781311552906 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 699 5871 AAVDAGMAM-[Oxidation] True NCI_RA007_Epitope_Rep4 851.35172530591 851.3511749679301 29.203 1 -1.0366757419561814 0.3250781311552906 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 98600 14687 SFSRESRCR True H1975_Epitope_Rep1 1126.53017475298 1126.5290699358602 61.71 2 -1.0366999781835533 0.32507878151260505 1.0 ['ENST00000511915.1_1_12:112123944-112130701:+|nuORF', 'ENST00000509936.5_1_12:112123944-112140026:+|nuORF', 'ENST00000514615.5_3_12:112123944-112140026:+|nuORF'] 2983 9231 AFGQPDNHGFG True H1975_Epitope_Rep1 1145.4890211336499 1145.4879299358602 40.416 2 -1.0367248838773855 0.32507878151260505 1.0 ['nc|ENSG00000157335|A5D8T8-2|CLEC18A', 'ENSG00000157335|ENST00000541793|CLEC18C', 'ENSG00000157322|ENST00000288040|CLEC18A', 'ENSG00000140839|ENST00000682950|CLEC18B'] 141228 13342 YTCVSYLQ True H1975_Epitope_Rep2 975.4371688015899 975.43661496793 56.452 1 -1.0367266569991773 0.32507878151260505 1.0 ['ENST00000508604.5_1_4:77039101-77051958:-|nuORF'] 59843 13181 LGFLKHIRTQ True PC9_epitope_Rep2 1211.7138761183899 1211.71222490379 55.975 3 -1.0367282714759098 0.32507878151260505 1.0 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 61839 6478 LLAVSHVG True PC9_epitope_Rep3 794.46503823194 794.46394993586 29.943 2 -1.0367319524390815 0.32507878151260505 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 113536 5138 TLTPDSKK True NCI_RA007_Epitope_Rep5 888.4916469026 888.49054993586 26.459 2 -1.03673477312131 0.32507878151260505 1.0 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.V790Lfs*10|1|0.1|ENSG00000181544|chrX:14843779-14843780|-/AGAAACTGAG|frameshift_variant'] 66651 10334 LSKRSYCKP True NCI_RA007_Epitope_Rep5 1080.57499968708 1080.57390993586 46.38 2 -1.0367924500355197 0.3250833749113731 1.0 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292', 'ZNF292|p.I1609Mfs*13|1|0.25|ENSG00000188994|chr6:87258456-87258457|AA/-|frameshift_variant', 'ZNF292|p.L1719Ffs*6|1|0.39|ENSG00000188994|chr6:87258778-87258779|-/C|frameshift_variant'] 79763 18857 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 78.292 2 -1.0367969942114552 0.3250833749113731 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 100563 16396 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 71.028 2 -1.0368161055986596 0.3250922363877473 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 62270 22408 LLFMKLRWFLK True PC9_epitope_Rep2 1493.8944833326498 1493.8933899358601 91.686 2 -1.0368878388030194 0.32514048631899584 1.0 ['ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-1|MTCL2', 'nc|ENSG00000149639|O94964-4|MTCL2'] 56051 9544 LASVMAGLCYA True NCI_RA007_Epitope_Rep2 1097.5249382601698 1097.5238499358602 41.738 2 -1.0369122899443262 0.3251493468128405 1.0 ['ENSG00000003989|ENST00000494857|SLC7A2', 'nc|ENSG00000003989|P52569-2|SLC7A2', 'nc|ENSG00000003989|P52569-3|SLC7A2'] 125441 16513 VITVFLNHS True PC9_epitope_Rep4 1028.5654805492 1028.5643899358602 71.49 2 -1.0369500667323905 0.3251627980254175 1.0 ['TAS2R40|p.N108D|1|0.04|ENSG00000221937|chr7:143222400-143222400|A/G|missense_variant', 'ENSG00000221937|ENST00000408947|TAS2R40'] 124119 17925 VGSPVRQRRS True NCI_RA007_Epitope_Rep3 1140.64758746372 1140.64707496793 78.542 1 -1.0369534543692789 0.3251627980254175 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 56439 12524 LDEIVDTL True PC9_epitope_Rep4 916.47532813212 916.47422993586 55.993 2 -1.0369715749155402 0.3251627980254175 1.0 ['ENST00000473565.5_1_2:201718031-201724542:-|nuORF', 'ENST00000461981.5_1_2:201722417-201724542:-|nuORF', 'ENST00000519132.5_1_5:178032378-178044013:-|nuORF', 'ENST00000519583.5_1_5:178030620-178044013:-|nuORF'] 72165 19750 MGDDCNCPCDM True NCI_RA007_Epitope_Rep3 1202.31707294586 1202.31596993586 86.094 2 -1.0369929989930724 0.3251805172640147 1.0 ['ENST00000431629.5_2_7:114654517-114655986:+|nuORF', 'ENSG00000135272|ENST00000393486|MDFIC', 'nc|ENSG00000135272|Q9P1T7-1|MDFIC'] 133107 4191 VVQLLLKPVL True PC9_epitope_Rep1 1120.7583666993198 1120.7572699358602 21.017 2 -1.03700141289659 0.3251805172640147 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 56334 7744 LDCYSHNQVAS True H1975_Epitope_Rep1 1235.5240863130302 1235.52298993586 34.747 2 -1.0370375424310665 0.32522449193929526 1.0 ['ENST00000467698.5_1_2:232123695-232137721:+|nuORF'] 71631 16345 MDQMEKKL True NCI_RA007_Epitope_Rep4 1021.4936381318898 1021.49254993586 70.868 2 -1.0370414024753594 0.32522449193929526 1.0 ['GBP4|p.A543D|1|0.13|ENSG00000162654|chr1:89186412-89186412|G/T|missense_variant'] 34548 16523 GPSIVTPPKDI True PC9_epitope_Rep1 1122.62847472858 1122.62683490379 68.38 3 -1.0370697318736568 0.32523335039974793 1.0 ['nc|ENSG00000163453|Q16270-2|IGFBP7', 'ENSG00000163453|ENST00000295666|IGFBP7'] 81977 20599 PLTPYSRMV True PC9_epitope_Rep1 1062.55320161334 1062.55210993586 84.049 2 -1.0371038064475153 0.32525106662290776 1.0 ['ENST00000356641.7_2_11:120207751-120207811:+|nuORF'] 91247 8359 RGGGSHPA True NCI_RA007_Epitope_Rep4 737.3568847652899 737.35633496793 38.966 1 -1.0371123373200832 0.32525106662290776 1.0 ['ENST00000314728.9_1_17:19239740-19240025:+|nuORF'] 3796 11354 AGTTYFLEV True PC9_epitope_Rep5 999.49131254943 999.49020993586 48.669 2 -1.037133593884998 0.32526878191580133 1.0 ['ENST00000505328.1_1_4:108991620-108999477:-|nuORF'] 131994 17819 VTSNAALTLR True NCI_RA007_Epitope_Rep3 1044.5927579262 1044.5916699358602 78.134 2 -1.0371339530882988 0.32526878191580133 1.0 ['ENSG00000154734|ENST00000284984|ADAMTS1', 'ADAMTS1|p.S639Vfs*40|1|0.21|ENSG00000154734|chr21:26839701-26839701|C/-|frameshift_variant'] 15917 10591 EDLKQPMAERK True H1975_Epitope_Rep3 1343.68673496403 1343.68562993586 45.808 2 -1.0371630494057242 0.325273369301251 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 133112 4165 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 21.138 2 -1.0371713520604955 0.325273369301251 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 29934 17295 FVYKYEIPLV True PC9_epitope_Rep2 1269.70091139285 1269.69980993586 71.783 2 -1.0372450449697665 0.3252822263061171 1.0 ['ZBTB41|p.K534Nfs*4|1|0.06|ENSG00000177888|chr1:197181065-197181065|C/-|frameshift_variant', 'nc|ENSG00000177888|Q5SVQ8-2|ZBTB41', 'ENST00000467322.1_1_1:197145142-197169603:-|nuORF', 'ZBTB41|p.V653Yfs*59|1|0.05|ENSG00000177888|chr1:197175038-197175038|C/-|frameshift_variant', 'ENSG00000177888|ENST00000367405|ZBTB41'] 142177 24638 YVTKTVLAA True NCI_RA007_Epitope_Rep5 964.5593325395998 964.55878496793 102.25 1 -1.037352305827996 0.3253042097110828 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 71413 4640 LYSYACVYWN True H1975_Epitope_Rep3 1280.5535955361597 1280.5524899358602 22.969 2 -1.0373600424345535 0.3253130660786012 1.0 ['ENSG00000144820|ENST00000273352|ADGRG7'] 20665 13109 EQAQQIRLQAE True NCI_RA007_Epitope_Rep1 1312.6735274280397 1312.67242993586 54.985 2 -1.0374914179175476 0.32538755365370226 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 14576 8382 DTVLVAKPHR True H1975_Epitope_Rep1 1134.65094150866 1134.6498499358602 37.169 2 -1.037510141879477 0.325418701107786 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 52477 23447 KKVKIHYQKKK True NCI_RA007_Epitope_Rep4 1426.9136385540999 1426.9125499358602 101.76 2 -1.0375278650049145 0.325418701107786 1.0 ['ENST00000446606.1_1_9:134116917-134117070:+|nuORF'] 94816 13832 RSRIEILRR True NCI_RA007_Epitope_Rep4 1197.7418222017297 1197.74017490379 60.457 3 -1.0375357726470635 0.325418701107786 1.0 ['CON__P02672'] 16089 9207 EEAERLTTEEQ True H1975_Epitope_Rep1 1333.5997533510902 1333.59864993586 40.323 2 -1.0375378646329885 0.325418701107786 1.0 ['ENSG00000121634|ENST00000369235|GJA8'] 44753 13290 ILYQWRQRRKL True H1975_Epitope_Rep1 1558.92084919286 1558.9197499358602 56.223 2 -1.0375615699735106 0.325418701107786 1.0 ['ENSG00000167595|ENST00000646935|PROSER3', 'nc|ENSG00000167595|Q2NL68-2|PROSER3', 'nc|ENSG00000167595|Q2NL68|PROSER3'] 18799 10934 ELDGKREWREK True H1975_Epitope_Rep1 1444.7422756941999 1444.7411699358602 47.021 2 -1.0376252494524179 0.3254495340595879 1.0 ['ENST00000520239.1_1_8:70041855-70042335:+|nuORF'] 55122 16770 LAAAVPTAP True PC9_epitope_Rep2 809.4647038787699 809.46360993586 69.753 2 -1.0376258747297784 0.3254495340595879 1.0 ['ENST00000530694.5_1_11:12023362-12031257:-|nuORF', 'ENST00000533900.1_1_11:12023572-12030129:-|nuORF', 'ENST00000534479.5_1_11:12023699-12030797:-|nuORF', 'ENST00000526218.5_1_11:12000483-12031257:-|nuORF', 'ENSG00000050165|ENST00000683431|DKK3'] 112863 11113 TLKHKINP True H1975_Epitope_Rep3 949.5709002828099 949.56980993586 47.842 2 -1.0376956883357793 0.32547151238335237 1.0 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3'] 107258 24434 SVKSLNAIQ True H1975_Epitope_Rep1 958.54474510462 958.54364993586 101.29 2 -1.037767099898895 0.3255459890802184 1.0 ['ENST00000239231.6_1_5:167984225-167984402:-|nuORF'] 72536 20590 MLKRKWRTF True H1975_Epitope_Rep2 1264.7226669802797 1264.72102490379 85.291 3 -1.0378235555785058 0.32559421469163835 1.0 ['ENST00000577944.5_2_17:80397520-80400257:+|nuORF'] 39460 6 HLCCDCDD True H1975_Epitope_Rep2 922.2619239449 922.26082993586 0.027143 2 -1.0378506697180891 0.32561191679244045 1.0 ['ENST00000497446.5_1_7:107334108-107335121:+|nuORF', 'ENST00000265715.7_1_7:107330615-107335121:+|nuORF', 'ENST00000480841.5_1_7:107333407-107335121:+|nuORF'] 94272 14546 RRREEEERRKQ True H1975_Epitope_Rep1 1570.8400326728595 1570.83892993586 61.156 2 -1.0378663505592487 0.32561191679244045 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 102419 9723 SLTNLALSRRS True H1975_Epitope_Rep3 1216.6887835693599 1216.6876899358601 42.42 2 -1.037904657453013 0.3256122207931967 1.0 ['nc|ENSG00000206120|Q0D2K5|EGFEM1P'] 6665 23008 APWRWRWRRWR True PC9_epitope_Rep4 1710.9232492346996 1710.92214993586 96.719 2 -1.0379115695571497 0.3256122207931967 1.0 ['ENST00000253814.5_1_5:141488387-141511833:+|nuORF'] 103656 4944 SPVAAPHEE True PC9_epitope_Rep3 935.43486030247 935.43376993586 24.11 2 -1.037919280020267 0.3256122207931967 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 12502 7842 DKFWNFIFYKF True H1975_Epitope_Rep1 1553.7707222881697 1553.76907490379 35.114 3 -1.0379573446291723 0.3256125247700161 1.0 ['AMFR|p.M380Vfs*3|1|0.07|ENSG00000159461|chr16:56389322-56389323|AT/-|frameshift_variant', 'ENSG00000159461|ENST00000290649|AMFR', 'ENST00000568657.1_1_16:56442078-56458825:-|nuORF'] 62145 17415 LLEHNPNLL True PC9_epitope_Rep1 1061.58694426977 1061.58584993586 71.784 2 -1.0379607230237597 0.3256125247700161 1.0 ['ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10'] 13125 6813 DLQTWFFPPP True H1975_Epitope_Rep3 1246.60225998074 1246.60116993586 31.16 2 -1.0379726648884973 0.3256125247700161 1.0 ['ENSG00000177673|ENST00000313965|TEX44'] 98518 14141 SFLTKYFNK True PC9_epitope_Rep1 1146.60734536118 1146.60568490379 59.217 3 -1.0380370938517427 0.3256213747670665 1.0 ['ENSG00000101126|ENST00000621696|ADNP'] 132800 18716 VVKKTTTP True NCI_RA007_Epitope_Rep2 872.53311779176 872.53202993586 77.6 2 -1.0380999623139149 0.3256433473747753 1.0 ['ENSG00000121361|ENST00000240662|KCNJ8'] 79552 8771 PDDPDFPGSPV True H1975_Epitope_Rep2 1141.49276910141 1141.49166993586 38.701 2 -1.038160108906936 0.3256784420765314 1.0 ['ENSG00000177602|ENST00000325418|HASPIN', 'nc|ENSG00000177602|Q8TF76-2|HASPIN'] 8517 3112 ATSSTLVSK True NCI_RA007_Epitope_Rep4 892.48656152216 892.48546993586 17.399 2 -1.0382055269107093 0.32568301708526887 1.0 ['ENST00000332782.6_1_12:57640633-57642538:-|nuORF'] 44358 12726 ILEFYLELGL True H1975_Epitope_Rep3 1208.6692769114 1208.66816993586 54.162 2 -1.0382163741461308 0.32568301708526887 1.0 ['MRPL3|p.R166L|1|0.47|ENSG00000114686|chr3:131490052-131490052|C/A|missense_variant'] 126169 20593 VLFNKVLVN True PC9_epitope_Rep4 1044.6331661861998 1044.63206993586 87.363 2 -1.0382448428010467 0.3256833182432521 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2', 'ENST00000308080.9_1_18:2906258-2913399:+|nuORF'] 110522 12158 TFKFTLLNRRK True H1975_Epitope_Rep1 1422.8459529170998 1422.84484993586 51.784 2 -1.0382538559715078 0.3256833182432521 1.0 ['ENST00000427178.1_1_2:110843021-110843120:-|nuORF'] 77768 23894 NTQISLSLYF True PC9_epitope_Rep2 1184.607739284 1184.60664993586 97.387 2 -1.0382614410977258 0.3256833182432521 1.0 ['ENST00000428388.6_1_6:32135933-32136035:+|nuORF'] 75369 11052 NISVDIHCGE True H1975_Epitope_Rep3 1085.48115887189 1085.48006993586 47.601 2 -1.038363838017643 0.32570101428927584 1.0 ['ENSG00000085788|ENST00000397166|DDHD2'] 124336 14456 VGTSCSGC True NCI_RA007_Epitope_Rep5 712.2520108842 712.25146496793 62.287 1 -1.038369549028346 0.32570101428927584 1.0 ['nc|ENSG00000149243|Q6PF15-2|KLHL35', 'ENST00000460787.1_1_11:75137492-75141101:-|nuORF'] 96491 12877 SACLSSSK True H1975_Epitope_Rep3 781.36400386133 781.36290993586 54.756 2 -1.0383738166477918 0.32570986196399515 1.0 ['ENST00000461013.5_1_5:131713711-131714174:+|nuORF'] 140145 13467 YQRIERNL True PC9_epitope_Rep3 1090.5883412521 1090.5872499358602 56.85 2 -1.0384087661458934 0.32574067756580155 1.0 ['ENSG00000177169|ENST00000321867|ULK1'] 68289 9017 LTEGVLMRDP True H1975_Epitope_Rep3 1129.58014463717 1129.5790499358602 39.681 2 -1.038409736487727 0.32574067756580155 1.0 ['nc|ENSG00000092098|Q96EP0-2|RNF31', 'nc|ENSG00000092098|Q96EP0-3|RNF31', 'ENSG00000092098|ENST00000324103|RNF31', 'ENST00000491351.5_1_14:24616897-24626527:+|nuORF'] 96811 7713 SAQTHFAA True PC9_epitope_Rep4 831.3875161872298 831.38640993586 37.055 2 -1.0384175088149175 0.3257495243718428 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 73733 7455 NAALPTFR True NCI_RA007_Epitope_Rep3 888.48175092524 888.48064993586 36.445 2 -1.0384343275011239 0.32577149155033064 1.0 ['TMEM30A|p.T263_A264insYFCKN|1|0.09|ENSG00000112697|chr6:75258883-75258884|-/TTTTTACAAAAGTAT|inframe_insertion'] 97358 11343 SEDGRKKPV True H1975_Epitope_Rep1 1014.54580773378 1014.5447099358599 48.607 2 -1.0385002723753378 0.3257934581523807 1.0 ['ENSG00000182013|ENST00000313683|PNMA8A'] 61436 24302 LIWDIAIALA True PC9_epitope_Rep1 1097.6484818971699 1097.64738993586 98.304 2 -1.0387514073628819 0.32592038626046343 1.0 ['OR6K2|p.F270I|1|0.12|ENSG00000196171|chr1:158699845-158699845|A/T|missense_variant'] 95105 21232 RVCPQGEG True H1975_Epitope_Rep2 844.3861362882399 844.38502993586 87.873 2 -1.0388056204765501 0.32595547042076123 1.0 ['ENST00000547085.1_1_12:112600816-112607652:-|nuORF'] 73280 5660 MSSLFLSPPNQ True NCI_RA007_Epitope_Rep2 1219.59070932087 1219.58905490379 26.631 3 -1.0388621526128037 0.32602563597958567 1.0 ['ENST00000541507.1_12:9094188-9094401:-|nuORF'] 124616 9368 VGWDHNTRLL True PC9_epitope_Rep3 1209.62545503681 1209.62380490379 40.973 3 -1.0388744687984506 0.32602563597958567 1.0 ['ENST00000552132.5_1_12:29525443-29534076:-|nuORF'] 109432 5347 TDGGGYVKR True NCI_RA007_Epitope_Rep1 951.47739382079 951.47628993586 24.876 2 -1.038957168226002 0.32606955905697754 1.0 ['ENST00000225726.9_1_17:61850918-61850993:-|nuORF'] 133568 5007 VWVAVVFSKQ True NCI_RA007_Epitope_Rep2 1161.65462990677 1161.65299490379 24.1 3 -1.0389818497562273 0.32606955905697754 1.0 ['ENST00000606070.1_1_6:108279748-108280261:+|nuORF'] 131716 7111 VTPAPEPA True PC9_epitope_Rep3 780.40176926904 780.40066993586 32.36 2 -1.0389952345736388 0.3260829638181198 1.0 ['TBC1D10B|p.G693Rfs*7|1|0.2|ENSG00000169221|chr16:30358295-30358296|-/G|frameshift_variant', 'ENSG00000169221|ENST00000409939|TBC1D10B'] 56402 18459 LDEALQHP True PC9_epitope_Rep3 921.45559574705 921.45448993586 76.206 2 -1.0389975392598245 0.3260829638181198 1.0 ['ENSG00000113240|ENST00000316308|CLK4', 'ENST00000519132.5_1_5:178030620-178030809:-|nuORF', 'ENST00000520878.5_1_5:178030620-178044471:-|nuORF', 'ENST00000519583.5_1_5:178030620-178044013:-|nuORF'] 117429 8118 TVQAECPMHL True PC9_epitope_Rep2 1127.51035082519 1127.5087049037902 36.583 3 -1.039015371484256 0.3260829638181198 1.0 ['ENSG00000151834|ENST00000381620|GABRA2', 'nc|ENSG00000151834|P47869-2|GABRA2'] 59304 20089 LFHLQQVE True PC9_epitope_Rep2 1012.5341804209199 1012.53308993586 82.68 2 -1.0392202893713884 0.3261705170084091 1.0 ['SEC16A|p.V1878F|1|0.17|ENSG00000148396|chr9:136456085-136456085|C/A|missense_variant'] 81482 9286 PLGLAKLTGP True H1975_Epitope_Rep1 965.59096702105 965.58986993586 40.63 2 -1.0394449913235961 0.3262931430295557 1.0 ['PPFIA3|p.Q899Hfs*20|1|0.28|ENSG00000177380|chr19:49142956-49142968|GGAGATGGTCTCG/-|frameshift_variant', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'ENSG00000177380|ENST00000334186|PPFIA3'] 45938 17558 ISEIQDSPQ True PC9_epitope_Rep5 1015.4822044177099 1015.48110993586 72.545 2 -1.0395083988884548 0.3262931430295557 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'DYNC2H1|p.G2197Wfs*36|1|0.44|ENSG00000187240|chr11:103185004-103185005|-/T|frameshift_variant', 'nc|ENSG00000187240|Q8NCM8-3|DYNC2H1'] 130737 14955 VSVYLRDL True PC9_epitope_Rep2 963.5389314481899 963.53782993586 62.784 2 -1.0395689590661 0.3263675718221173 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-4|RUSC1'] 345 4359 AAILWEQNQR True PC9_epitope_Rep4 1227.63601972051 1227.6343649037901 23.21 3 -1.0396157553782635 0.32637640854770367 1.0 ['ENST00000540651.5_1_1:228270396-228270462:+|nuORF'] 92396 10891 RLPTPEQI True PC9_epitope_Rep3 952.5341804209199 952.53308993586 46.875 2 -1.0396592448440423 0.32640719898206816 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 75879 9869 NLQNQASLSF True PC9_epitope_Rep4 1120.5512870370399 1120.55018993586 45.612 2 -1.0396676723478846 0.32640719898206816 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 40630 12233 HRLRLFLDVEV True NCI_RA007_Epitope_Rep1 1395.7986683715103 1395.79756993586 51.553 2 -1.0396766807768125 0.32642915234672193 1.0 ['ENSG00000144589|ENST00000456909|STK11IP'] 122869 10294 VGHHASSI True PC9_epitope_Rep1 806.40350060454 806.40240993586 44.482 2 -1.0396840940827883 0.3264337058607482 1.0 ['ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-8|SEPTIN4'] 27408 23890 FLWKKKLRQ True NCI_RA007_Epitope_Rep5 1245.7709970716899 1245.7693649037901 99.26 3 -1.0396866034570544 0.3264337058607482 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 39931 24822 HPHVHLLLLHH True PC9_epitope_Rep2 1351.7625576463101 1351.76146993586 101.17 2 -1.0397217293992824 0.3264425410233876 1.0 ['ENST00000231706.5_1_3:170198310-170198370:-|nuORF'] 122118 14151 VGAESGRYYCL True PC9_epitope_Rep1 1216.55465816532 1216.5535699358602 59.254 2 -1.03974089396132 0.32646449277263306 1.0 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000492407.1_1_5:141008096-141008788:-|nuORF', 'ENST00000476739.5_1_5:141007605-141008788:-|nuORF', 'ENST00000467533.5_1_5:141005762-141009272:-|nuORF'] 59046 13398 LEVRVQAP True PC9_epitope_Rep2 910.5236157372198 910.52250993586 56.817 2 -1.0398915694780457 0.32656514382402707 1.0 ['nc|ENSG00000181036|Q6DN72-3|FCRL6', 'nc|ENSG00000181036|Q6DN72-2|FCRL6', 'ENSG00000181036|ENST00000368106|FCRL6'] 132807 23846 VVKRTVSIM True PC9_epitope_Rep4 1031.6161362230698 1031.61502993586 100.14 2 -1.0400113426404456 0.3266352749832767 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 70989 6637 LYHFLFWQDLP True NCI_RA007_Epitope_Rep2 1477.7394221598897 1477.73776490379 30.428 3 -1.040022684147802 0.3266352749832767 1.0 ['ENST00000523988.5_1_13:45969507-45969588:-|nuORF'] 13683 7431 DPSAPDYLEYD True H1975_Epitope_Rep3 1283.51937777207 1283.51773490379 33.562 3 -1.0400613491193234 0.32667033918312743 1.0 ['ENSG00000138231|ENST00000260803|DBR1', 'DBR1|p.T496Lfs*10|1|0.24|ENSG00000138231|chr3:138162039-138162039|C/-|frameshift_variant', 'nc|ENSG00000138231|Q9UK59-2|DBR1'] 135513 22209 WKERPEER True NCI_RA007_Epitope_Rep5 1128.5676058075198 1128.56596490379 92.574 3 -1.0401316057141774 0.3266791705468043 1.0 ['LCK|p.D483E|1|0.29|ENSG00000182866|chr1:32285635-32285635|C/A|missense_variant'] 92664 8995 RNLWEHYYK True H1975_Epitope_Rep3 1307.6411051009502 1307.64000993586 39.594 2 -1.040238797857873 0.32673617942160144 1.0 ['ENSG00000113966|ENST00000463745|ARL6', 'nc|ENSG00000113966|Q9H0F7-2|ARL6'] 115969 8478 TSIKDCGVYTP True H1975_Epitope_Rep3 1182.5590748394197 1182.55796993586 37.595 2 -1.0402506380251557 0.32673617942160144 1.0 ['ENSG00000182752|ENST00000328252|PAPPA'] 124428 9689 VGVFVKLW True NCI_RA007_Epitope_Rep4 946.5640239972198 946.56292993586 44.118 2 -1.0403538795504905 0.3268105867848805 1.0 ['ENST00000604187.1_1_14:50517346-50518003:+|nuORF'] 55697 4574 LALGSPRLVRR True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 22.623 3 -1.0403734193772873 0.3268325311159783 1.0 ['ENSG00000099822|ENST00000251287|HCN2'] 5040 20869 ALKDFWNL True PC9_epitope_Rep4 1005.52836676449 1005.52726993586 88.428 2 -1.0403950090885117 0.3268501881991895 1.0 ['ENSG00000177303|ENST00000321617|CASKIN2', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 114076 10349 TPFGKAAA True PC9_epitope_Rep5 761.4071890026498 761.40608993586 44.792 2 -1.0403968232720613 0.3268501881991895 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'nc|ENSG00000204271|Q5JUX0-2|SPIN3'] 16105 9803 EEAFSRKTELI True NCI_RA007_Epitope_Rep1 1321.68778050985 1321.6866899358602 42.133 2 -1.0404935242634556 0.3268766720872895 1.0 ['nc|ENSG00000145908|Q96RE9-4|ZNF300', 'ENSG00000145908|ENST00000274599|ZNF300', 'nc|ENSG00000145908|Q96RE9-2|ZNF300', 'nc|ENSG00000145908|Q96RE9-3|ZNF300'] 100233 3269 SIWHTACA True PC9_epitope_Rep6 887.39597269595 887.39486993586 18.642 2 -1.0404997060278254 0.3268766720872895 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 116962 7676 TVGGWEEAK True H1975_Epitope_Rep3 975.4661604307499 975.46506993586 34.508 2 -1.0405045416204965 0.3268766720872895 1.0 ['ENST00000305123.5_1_2:227663749-227664043:-|nuORF'] 84068 18509 PVYRLPALP True PC9_epitope_Rep3 1024.6069514383596 1024.60584993586 76.414 2 -1.0405757030049267 0.3268854995869015 1.0 ['ENSG00000167178|ENST00000453268|ISLR2'] 121427 10680 VEVYDRNSLY True H1975_Epitope_Rep2 1256.60371653272 1256.60260993586 46.104 2 -1.0406552632693715 0.3269336690534267 1.0 ['ENSG00000134256|ENST00000682167|CD101'] 116809 12176 TVEESNKFYK True H1975_Epitope_Rep1 1243.6084675599898 1243.60736993586 51.853 2 -1.0406613455066163 0.3269382081409987 1.0 ['ENSG00000146085|ENST00000274813|MMUT'] 17536 194 EHGLPRHCRW True PC9_epitope_Rep3 1289.6199928168899 1289.61835490379 1.0779 3 -1.0406787235801849 0.3269382081409987 1.0 ['ENST00000556626.5_3_14:65269000-65271771:-|nuORF'] 139177 28322 YLEELILPI True H1975_Epitope_Rep1 1101.6321631266899 1101.63106993586 119.83 2 -1.0407261836205546 0.3269470343706152 1.0 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000474988.5_1_6:36410818-36454949:+|nuORF', 'nc|ENSG00000112078|Q7Z5Y7-2|KCTD20'] 97009 21262 SCCCTHCCCP True H1975_Epitope_Rep2 1058.25705597194 1058.2559499358601 87.996 2 -1.0407468279670928 0.3269515729290969 1.0 ['ENSG00000204323|ENST00000375215|SMIM5'] 45409 24589 IQFDTYFYI True NCI_RA007_Epitope_Rep5 1208.57537652656 1208.57426993586 102.06 2 -1.040751280194995 0.3269515729290969 1.0 ['CSMD3|p.D1508Y|1|0.15|ENSG00000164796|chr8:112550713-112550713|C/A|missense_variant'] 62180 10317 LLENRTEKRKR True NCI_RA007_Epitope_Rep2 1441.8477438222496 1441.8466499358601 44.722 2 -1.0407712904528899 0.3269606493319172 1.0 ['ENSG00000135913|ENST00000258399|USP37', 'nc|ENSG00000135913|Q86T82-2|USP37', 'ENST00000478329.1_1_2:219394729-219411793:-|nuORF'] 10635 12102 CPFGENCF True NCI_RA007_Epitope_Rep3 915.3255101776299 915.32440993586 54.721 2 -1.040786805406849 0.3269606493319172 1.0 ['nc|ENSG00000238222|Q13434|MKRN4P'] 26655 4799 FIQQCQFFFYN True NCI_RA007_Epitope_Rep2 1483.65945758703 1483.65781490379 23.297 3 -1.040825607548852 0.3269606493319172 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55005616-55005874:+|nuORF'] 69578 19305 LVDHAYETYF True PC9_epitope_Rep2 1256.5713537752802 1256.5702499358601 79.631 2 -1.0408433576881269 0.3269606493319172 1.0 ['ENSG00000173208|ENST00000308666|ABCD2'] 136758 4348 WYPYNYSR True NCI_RA007_Epitope_Rep5 1147.50869394907 1147.50703490379 23.335 3 -1.040889137730916 0.3269825868037344 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11'] 20927 7772 EQNALYSYQK True H1975_Epitope_Rep1 1242.5880664685799 1242.58696993586 34.851 2 -1.0409394056427996 0.3269914115256015 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'CFAP54|p.L1793Gfs*13|1|0.13|ENSG00000188596|chr12:96658260-96658285|CAGCTTCTGCTGAGAATACAGAAGTT/-|frameshift_variant'] 56188 4753 LAWLYFEIFDS True H1975_Epitope_Rep3 1402.68090422426 1402.6792649037902 23.409 3 -1.0410349746888383 0.3270002360160491 1.0 ['ENSG00000113838|ENST00000338733|TBCCD1'] 94494 19711 RRRRRRRRTRA True PC9_epitope_Rep4 1595.0053561492198 1595.0042499358601 83.941 2 -1.041076084772641 0.32703099596160906 1.0 ['ENST00000276602.10_1_8:73921164-73926156:+|nuORF'] 60097 16539 LGLRRLRQRR True PC9_epitope_Rep1 1322.8483529589398 1322.8472499358602 68.44 2 -1.0411136006899466 0.32703099596160906 1.0 ['ENSG00000171119|ENST00000303212|NRTN'] 66133 14502 LSELQNPLLPR True H1975_Epitope_Rep1 1278.72958575218 1278.7284899358601 60.984 2 -1.0411858915107923 0.32707915404686044 1.0 ['ENSG00000183379|ENST00000331628|SYNDIG1L'] 128427 21107 VPRRAAAA True PC9_epitope_Rep4 810.4824196315798 810.48187496793 89.35 1 -1.0412109616799392 0.3270879769240855 1.0 ['ENST00000594019.5_1_19:47570396-47593253:-|nuORF'] 634 12606 AASRGPTA True NCI_RA007_Epitope_Rep5 729.37695150353 729.3764049679301 55.142 1 -1.0412668848507587 0.3271361329994362 1.0 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000506477.5_1_5:137906647-137911007:-|nuORF'] 88197 5801 QRWSWCRWWWT True NCI_RA007_Epitope_Rep1 1679.7568206428696 1679.75518490379 26.617 3 -1.0414587856235742 0.3272236207258234 1.0 ['ENST00000348956.6_1_14:103986274-103986647:-|nuORF'] 16145 22960 EEDADCYDD True PC9_epitope_Rep1 1073.31315005693 1073.3120499358602 93.118 2 -1.0414878114231603 0.32722815113931353 1.0 ['ENSG00000107341|ENST00000263228|UBE2R2'] 68979 10528 LTPLCGSLSL True PC9_epitope_Rep5 1002.5419682233 1002.54086993586 45.484 2 -1.0414896989962883 0.32722815113931353 1.0 ['ENST00000218981.5_1_13:52342325-52342490:-|nuORF'] 38171 23048 HDKRKKSRS True PC9_epitope_Rep5 1140.64758746372 1140.64594490379 93.645 3 -1.0416184768499697 0.3273156342182891 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 105250 16797 SRKLRRSRHS True NCI_RA007_Epitope_Rep3 1281.7490328404901 1281.7479299358602 73.922 2 -1.0417261797199964 0.32732445330116944 1.0 ['ENST00000520674.5_1_5:141016607-141016847:+|nuORF'] 66083 7096 LSEKMFHTLD True PC9_epitope_Rep3 1219.59070932087 1219.58905490379 32.303 3 -1.0417871659705185 0.3273771286985933 1.0 ['ENST00000584809.1_1_17:45909557-45911959:+|nuORF', 'ENSG00000141294|ENST00000269025|LRRC46'] 100040 13211 SIREQWWRWNR True NCI_RA007_Epitope_Rep2 1615.8120270198697 1615.81092993586 56.021 2 -1.0418190095880873 0.3273771286985933 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 375 15631 AALAALALA True NCI_RA007_Epitope_Rep5 783.48543932335 783.48434993586 66.832 2 -1.0418285212699752 0.3273771286985933 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 93864 13815 RREKHENRRDV True H1975_Epitope_Rep3 1493.79235420445 1493.7912499358602 58.446 2 -1.0418477741867904 0.3273859465128474 1.0 ['MAGI1|p.K1345N|1|0.2|ENSG00000151276|chr3:65356732-65356732|C/G|missense_variant'] 45841 11878 ISDNAARVL True PC9_epitope_Rep1 957.52434401321 957.52324993586 50.554 2 -1.0418626929182682 0.32739047219527545 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 39218 7470 HIHEACSSI True PC9_epitope_Rep5 995.44946482079 995.44836993586 33.686 2 -1.0418911015070307 0.32739047219527545 1.0 ['ACOT9-APOO|2|fusion', 'ENSG00000123130|ENST00000379303|ACOT9'] 141770 19972 YVAFNGTKV True PC9_epitope_Rep1 997.5232813840498 997.52218993586 81.647 2 -1.0419053650999515 0.3273992894878282 1.0 ['nc|ENSG00000163531|O94856|NFASC', 'nc|ENSG00000163531|O94856-8|NFASC', 'nc|ENSG00000163531|O94856-5|NFASC', 'nc|ENSG00000163531|O94856-13|NFASC', 'nc|ENSG00000163531|O94856-7|NFASC', 'ENSG00000163531|ENST00000339876|NFASC', 'nc|ENSG00000163531|O94856-6|NFASC', 'nc|ENSG00000163531|O94856-11|NFASC', 'nc|ENSG00000163531|O94856-3|NFASC', 'nc|ENSG00000163531|O94856-10|NFASC', 'NFASC|p.G1109Efs*44|1|0.14|ENSG00000163531|chr1:205009592-205009593|-/A|frameshift_variant', 'nc|ENSG00000163531|O94856-12|NFASC', 'nc|ENSG00000163531|O94856-4|NFASC', 'ENST00000512826.5_1_1:204926851-204957975:+|nuORF', 'ENST00000404977.6_1_1:204951067-204978869:+|nuORF', 'ENST00000495396.5_1_1:204956439-204985664:+|nuORF', 'ENST00000492085.1_1_1:204956601-204966704:+|nuORF'] 140719 10505 YSAVKRFI True NCI_RA007_Epitope_Rep2 982.5600012459399 982.55890993586 45.456 2 -1.0419242209882704 0.3274038146424592 1.0 ['ENST00000507668.6_1_5:79437547-79437607:-|nuORF'] 68852 7067 LTMGSGKG True PC9_epitope_Rep3 749.3741746222099 749.37306993586 32.192 2 -1.04193541364584 0.3274038146424592 1.0 ['ENST00000531068.5_1_11:64949924-64950017:+|nuORF'] 13640 7310 DPMGQTSFEHL True H1975_Epitope_Rep1 1260.54448740444 1260.5433899358602 33.125 2 -1.0420215518637657 0.3274345563464286 1.0 ['ENST00000461108.5_1_3:52003444-52003858:-|nuORF', 'nc|ENSG00000114779|Q96IU4-2|ABHD14B', 'ENST00000487005.1_1_3:52003444-52008077:-|nuORF', 'ENSG00000114779|ENST00000361143|ABHD14B'] 55451 4615 LAFQKDMMKPL True H1975_Epitope_Rep3 1320.6934005675998 1320.69175490379 22.875 3 -1.0420221893303112 0.3274345563464286 1.0 ['nc|ENSG00000144331|Q569K4-3|ZNF385B', 'nc|ENSG00000144331|Q569K4-2|ZNF385B', 'nc|ENSG00000144331|Q569K4|ZNF385B', 'ENSG00000144331|ENST00000410066|ZNF385B'] 81664 21171 PLLPLLWLWA True H1975_Epitope_Rep2 1220.73215195148 1220.73104993586 87.628 2 -1.0420709426944863 0.32745648070469796 1.0 ['ENST00000265563.12_1_3:48788858-48788939:-|nuORF'] 119983 8759 VDPVGNNY True PC9_epitope_Rep4 876.39774651776 876.39664993586 41.199 2 -1.0421396697128877 0.3274872198191113 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.F2369L|1|0.05|ENSG00000042781|chr1:215965330-215965330|G/C|missense_variant'] 843 9095 ADAVRFLG True NCI_RA007_Epitope_Rep5 847.4552018242299 847.45410993586 41.638 2 -1.0421489358588167 0.3274872198191113 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant', 'WDFY3|p.N1161Kfs*4|1|0.29|ENSG00000163625|chr4:84794523-84794524|-/T|frameshift_variant', 'ENST00000426414.6_1_4:85730999-85781744:-|nuORF'] 79594 11258 PDIYGPRPAVT True PC9_epitope_Rep1 1184.6189726740397 1184.6178699358602 48.183 2 -1.0421800156498306 0.3274917422534473 1.0 ['ENSG00000019505|ENST00000020926|SYT13'] 26486 14711 FIEFLKTF True H1975_Epitope_Rep1 1043.56916894731 1043.5680699358602 61.804 2 -1.042181521214565 0.3274917422534473 1.0 ['ENSG00000154710|ENST00000284957|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-4|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-3|RABGEF1'] 81001 24542 PIKRNAILHR True H1975_Epitope_Rep1 1216.7516586094398 1216.75056993586 101.7 2 -1.042261089804795 0.3275181859885969 1.0 ['nc|ENSG00000197168|Q6P3R8|NEK5', 'ENSG00000197168|ENST00000684899|NEK5'] 124350 14919 VGTTTGQG True NCI_RA007_Epitope_Rep4 719.34498266891 719.34443496793 64.849 1 -1.0422649889692917 0.3275181859885969 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10'] 141021 20527 YSKYYPLI True NCI_RA007_Epitope_Rep3 1045.54843350273 1045.54732993586 89.42 2 -1.0422804113324717 0.3275181859885969 1.0 ['ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 93677 8701 RQRWFQLESSK True H1975_Epitope_Rep3 1463.7633454919498 1463.7622499358602 38.467 2 -1.0423452570118132 0.3275925343399392 1.0 ['ENST00000442074.1_1_7:78115917-78116193:+|nuORF'] 43158 23186 IFEIHLHWP True PC9_epitope_Rep4 1190.62366413166 1190.62201490379 97.413 3 -1.0424087611656085 0.32763637316836614 1.0 ['ENSG00000053328|ENST00000338882|METTL24'] 15350 6817 EAGGGGSP True H1975_Epitope_Rep1 630.26091869178 630.26037496793 31.264 1 -1.0424454164630383 0.32763637316836614 1.0 ['nc|ENSG00000117013|P56696-2|KCNQ4', 'ENSG00000117013|ENST00000347132|KCNQ4'] 11039 5870 DASSFFFPP True H1975_Epitope_Rep3 1013.4494477374499 1013.44834993586 27.59 2 -1.0424493611729924 0.32764518538906146 1.0 ['nc|ENSG00000105737|Q16478-2|GRIK5'] 8047 15935 ATDPNSEWKEH True H1975_Epitope_Rep2 1312.56839365316 1312.5672899358601 66.493 2 -1.0425080778866067 0.3276671035386632 1.0 ['nc|ENSG00000107021|Q9NVG8-3|TBC1D13', 'ENSG00000107021|ENST00000372648|TBC1D13'] 39030 9300 HHRVPREEDEE True PC9_epitope_Rep1 1431.6491035853498 1431.64800993586 40.627 2 -1.0425284454822399 0.3276759151256209 1.0 ['ENSG00000130528|ENST00000252825|HRC'] 81928 5108 PLSPIKMC True H1975_Epitope_Rep3 887.46088145163 887.45978993586 24.759 2 -1.0425504921006998 0.32768043196204605 1.0 ['nc|ENSG00000178177|Q8N3X6-3|LCORL'] 41923 9937 IDCDYFYENQ True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 43.195 2 -1.0425641565837156 0.32768043196204605 1.0 ['AKR1B15|p.A74D|1|0.39|ENSG00000227471|chr7:134568228-134568228|C/A|missense_variant'] 48935 7564 KEEEKKEEME True H1975_Epitope_Rep1 1307.59149716651 1307.59038993586 34.087 2 -1.042606236077443 0.3277242644649761 1.0 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'ENST00000480137.1_1_7:128450376-128461960:+|nuORF'] 41993 18121 IDFGNIPDTTP True PC9_epitope_Rep3 1188.5662683948399 1188.56461490379 74.901 3 -1.0426455176805691 0.3277242644649761 1.0 ['nc|ENSG00000104361|Q9H841-1|NIPAL2'] 139696 6320 YNKFKNNCFC True NCI_RA007_Epitope_Rep3 1279.54779896307 1279.54615490379 31.862 3 -1.0426570672012179 0.32772877979739734 1.0 ['SLC6A14|p.S345C|1|0.2|ENSG00000268104|chrX:116451545-116451545|C/G|missense_variant'] 58543 20638 LEQKTDTREN True PC9_epitope_Rep1 1232.5996937814398 1232.5985899358602 84.205 2 -1.0426863141966969 0.32772877979739734 1.0 ['ENSG00000011114|ENST00000334746|BTBD7'] 91928 18465 RKLSFKRKRFL True PC9_epitope_Rep4 1477.93577098101 1477.93411490379 79.095 3 -1.0428186276693496 0.32780333110560733 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'FARP2|p.C654Lfs*26|1|0.39|ENSG00000006607|chr2:241468207-241468207|G/-|frameshift_variant', 'nc|ENSG00000006607|O94887-3|FARP2', 'nc|ENSG00000006607|O94887-2|FARP2', 'ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1'] 35422 6763 GSDYKLIYR True H1975_Epitope_Rep3 1113.5818588893299 1113.5807699358602 30.968 2 -1.0428313985344462 0.32780333110560733 1.0 ['nc|ENSG00000242498|Q7Z6K5-2|ARPIN', 'nc|ENSG00000157823|P59780-2|AP3S2', 'ENST00000560184.5_1_15:90408823-90437190:-|nuORF', 'ENST00000560224.1_1_15:90408823-90446582:-|nuORF', 'ENSG00000157823|ENST00000336418|AP3S2'] 45521 16477 IQPKLSLTL True PC9_epitope_Rep3 1011.63283183303 1011.63172993586 68.516 2 -1.042833389381795 0.32780333110560733 1.0 ['nc|ENSG00000153814|Q86VZ6-3|JAZF1', 'ENSG00000153814|ENST00000283928|JAZF1'] 124969 13585 VHTPPHVASAL True PC9_epitope_Rep4 1127.6087423435101 1127.60710490379 60.149 3 -1.0428445519468788 0.32780333110560733 1.0 ['ENSG00000037637|ENST00000375592|FBXO42'] 18815 24530 ELDLEIEKCEA True H1975_Epitope_Rep1 1290.6013335742202 1290.5996849037901 101.66 3 -1.0428561725305903 0.32781213963727857 1.0 ['ENSG00000198774|ENST00000361228|RASSF9'] 52563 2621 KLGSYVFKK True NCI_RA007_Epitope_Rep5 1068.6331661861998 1068.63206993586 14.77 2 -1.0428818680917722 0.32783405186534403 1.0 ['ENST00000491545.5_1_22:41175111-41195081:-|nuORF'] 133373 25509 VVVGVGLIVG True PC9_epitope_Rep1 910.5851533646199 910.5846049679301 103.11 1 -1.04291001578997 0.3278561788330254 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 63887 9677 LNNFQFGA True H1975_Epitope_Rep3 909.4344663796498 909.43336993586 42.241 2 -1.042920700292656 0.3278561788330254 1.0 ['ENST00000321348.8_1_2:172412719-172412857:+|nuORF'] 34243 6007 GNQLIPQPL True H1975_Epitope_Rep3 978.5498304850598 978.54872993586 28.12 2 -1.0429297945986111 0.3278561788330254 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 130834 9499 VTATGRVL True PC9_epitope_Rep2 815.4865019525099 815.48540993586 41.881 2 -1.0429329041877158 0.3278561788330254 1.0 ['ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-3|MAP3K6'] 26268 18610 FHFQAFWQAL True NCI_RA007_Epitope_Rep3 1293.6294777880898 1293.62838993586 81.426 2 -1.0430181512522168 0.3278999986897103 1.0 ['EIF3K|p.C112F|1|0.42|ENSG00000178982|chr19:38626083-38626083|G/T|missense_variant'] 109957 6947 TEHEWEQV True H1975_Epitope_Rep2 1056.4512386426 1056.45014993586 31.641 2 -1.0430250895004167 0.3278999986897103 1.0 ['nc|ENSG00000086717|O14829-5|PPEF1'] 138825 10522 YIYEICCWS True H1975_Epitope_Rep2 1178.47765371458 1178.47654993586 45.493 2 -1.0430719110125355 0.3279219077568134 1.0 ['ENSG00000146385|ENST00000275200|TAAR8'] 11005 6088 DAPAEKERCPA True NCI_RA007_Epitope_Rep2 1185.54482175761 1185.54372993586 28.287 2 -1.0431186712547764 0.3279438162497871 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 94111 23771 RRLPGHVV True NCI_RA007_Epitope_Rep4 932.5668179618799 932.56572993586 103.05 2 -1.0431912123176983 0.328005031314693 1.0 ['ENST00000374979.7_2_11:124644802-124670283:-|nuORF'] 120538 21220 VEFSPYEVGFL True PC9_epitope_Rep1 1285.6230549949698 1285.6219499358601 86.446 2 -1.0432414166329678 0.3280138359341221 1.0 ['ENSG00000159337|ENST00000290472|PLA2G4D', 'nc|ENSG00000159337|Q86XP0-2|PLA2G4D'] 99553 10000 SIEDLLEASMP True H1975_Epitope_Rep3 1203.56930516995 1203.56820993586 43.501 2 -1.043338605478619 0.3280619464388659 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 59842 13086 LGFLKHIRTQ True PC9_epitope_Rep2 1211.7138761183899 1211.71222490379 55.612 3 -1.0433996733650224 0.32811005568293483 1.0 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 123016 20389 VGIISIPLK True PC9_epitope_Rep3 938.6164534929 938.61534993586 83.677 2 -1.043406563957693 0.32811885858030027 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 105972 13642 SSSSSSSS True PC9_epitope_Rep4 714.2667919178601 714.2662449679301 60.366 1 -1.0434951552043563 0.32815386429441745 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 110533 19330 TFLIQEHFRK True PC9_epitope_Rep1 1317.7193554216499 1317.71770490379 79.158 3 -1.0436264140740268 0.32819767061012195 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S'] 87693 6511 QQWTYEQRKV True NCI_RA007_Epitope_Rep5 1364.6836981889196 1364.68260993586 31.71 2 -1.043638290115674 0.32819767061012195 1.0 ['ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENST00000466526.1_1_1:160147295-160152563:+|nuORF', 'nc|ENSG00000132681|Q13733-2|ATP1A4', 'ENSG00000132681|ENST00000368081|ATP1A4'] 58799 4472 LESLLSKSQ True H1975_Epitope_Rep1 1003.55497543515 1003.55386993586 22.218 2 -1.0436632721156274 0.32821957290711384 1.0 ['ENSG00000136026|ENST00000378026|CKAP4'] 6672 23188 APYKYPLNRK True PC9_epitope_Rep3 1248.69789170108 1248.6967899358601 94.463 2 -1.0436815678197084 0.3282283737930854 1.0 ['ENSG00000166261|ENST00000530393|ZNF202', 'nc|ENSG00000166261|O95125-2|ZNF202'] 105974 14817 SSSSSSSS True PC9_epitope_Rep5 714.2667919178601 714.2662449679301 61.993 1 -1.0437973068398918 0.3282895771105172 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 133714 15401 VYDLTQYEH True H1975_Epitope_Rep3 1166.52440358286 1166.5233099358602 64.651 2 -1.0438135400169455 0.3282983768488072 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'nc|ENSG00000155367|Q5JR12-2|PPM1J', 'ENST00000471106.5_1_1:113252636-113254039:-|nuORF'] 122949 20739 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 86.745 2 -1.043819404361864 0.3283071763565384 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 133375 25410 VVVGVGLIVG True PC9_epitope_Rep3 910.5851533646199 910.5846049679301 103.17 1 -1.0438775724285827 0.32832907578437154 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 87313 4492 QPQQQYNHPN True H1975_Epitope_Rep3 1252.5584976757998 1252.55686490379 22.398 3 -1.0439905915528866 0.3284033745546007 1.0 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 126539 16587 VLLMIPFP True H1975_Epitope_Rep2 928.54559705176 928.54448993586 69.027 2 -1.0440228399275837 0.32842096989703684 1.0 ['ENSG00000181009|ENST00000641181|OR52N5', 'OR52N5|p.G161S|1|0.14|ENSG00000181009|chr11:5778154-5778154|C/T|missense_variant'] 123446 18735 VGNRQIQI True NCI_RA007_Epitope_Rep4 926.52976374682 926.5292149679301 81.054 1 -1.044039180661459 0.32842096989703684 1.0 ['ENST00000313565.10_1_16:71898855-71918020:-|nuORF', 'ENST00000565516.5_1_16:71898855-71913932:-|nuORF', 'ENST00000563827.5_1_16:71901919-71917343:-|nuORF', 'ENST00000565601.5_2_16:71901919-71917197:-|nuORF', 'ENST00000568322.5_1_16:71901919-71918589:-|nuORF', 'ENST00000562985.5_1_16:71901919-71918510:-|nuORF', 'ENST00000568961.5_1_16:71901919-71917908:-|nuORF'] 73391 9008 MTGEKRSLDL True NCI_RA007_Epitope_Rep5 1148.5859582935998 1148.58430490379 41.308 3 -1.0440911990886608 0.32845166361016503 1.0 ['nc|ENSG00000122877|P11161-2|EGR2', 'ENSG00000122877|ENST00000242480|EGR2'] 59187 7234 LFDATLTQYVK True NCI_RA007_Epitope_Rep2 1297.69180326113 1297.69070993586 32.759 2 -1.0441013800051497 0.32845166361016503 1.0 ['ENSG00000075234|ENST00000381031|TTC38'] 87034 18130 QNAFQVIAL True PC9_epitope_Rep4 1002.5498304850598 1002.54872993586 77.802 2 -1.0441326161259252 0.3284735594241626 1.0 ['SNTG1|p.V236L|1|0.13|ENSG00000147481|chr8:50553075-50553075|G/T|missense_variant'] 87940 6702 QRLGFFPPA True PC9_epitope_Rep5 1031.5552502186697 1031.55414993586 30.75 2 -1.0441732731844742 0.32849115177553934 1.0 ['ENST00000474290.1_1_15:44069611-44069677:+|nuORF'] 46275 15470 ISPLNSPVRP True PC9_epitope_Rep1 1078.61349337078 1078.6123899358602 64.326 2 -1.0442004050304245 0.32849115177553934 1.0 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 74246 6927 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4596499358599 31.605 2 -1.0442227482742084 0.32851304621188304 1.0 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 19234 7371 ELISFPLKEYF True NCI_RA007_Epitope_Rep1 1384.72785441668 1384.7262149037902 32.666 3 -1.044237002892962 0.32852633371317796 1.0 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 68711 16823 LTKQCVLI True PC9_epitope_Rep4 916.5415743004799 916.54046993586 72.683 2 -1.0442723548927648 0.32852633371317796 1.0 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 14511 9479 DTLGLDNTVFC True NCI_RA007_Epitope_Rep2 1196.53833939484 1196.53724993586 41.484 2 -1.0442730929121695 0.32852633371317796 1.0 ['ENSG00000135912|ENST00000392102|TTLL4', 'TTLL4|p.E531Vfs*29|1|0.07|ENSG00000135912|chr2:218740161-218740162|-/TCACAGTTAGATTCTC|frameshift_variant', 'TTLL4|p.T586Yfs*9|1|0.26|ENSG00000135912|chr2:218745196-218745197|-/C|frameshift_variant'] 93129 25437 RPPGGGGG True H1975_Epitope_Rep3 653.32452200785 653.3239749679301 105.82 1 -1.0443045253335088 0.3285351286215749 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 58667 15130 LERKERELQNT True NCI_RA007_Epitope_Rep1 1414.7528403778997 1414.75174993586 62.921 2 -1.0443510197658246 0.3285570210480818 1.0 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000567638.1_1_15:75140939-75144521:-|nuORF', 'ENST00000563829.5_1_15:75137426-75144629:-|nuORF'] 91907 10253 RKLHYQTYREM True H1975_Epitope_Rep3 1523.7667166202298 1523.76560993586 44.486 2 -1.044376230571311 0.32856151196447986 1.0 ['ENSG00000085840|ENST00000371568|ORC1'] 133502 17950 VWGSINTG True NCI_RA007_Epitope_Rep5 832.4079172786401 832.40682993586 75.83 2 -1.0443865538764536 0.32856151196447986 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 1104 8308 AEAMADKA True PC9_epitope_Rep3 805.3640038613299 805.36290993586 36.929 2 -1.044446049202441 0.3285703059513831 1.0 ['ENSG00000100401|ENST00000356244|RANGAP1'] 112742 19772 TLHFENVYGCL True PC9_epitope_Rep1 1294.60160835774 1294.6005099358601 80.88 2 -1.0444666085572363 0.3285921967702644 1.0 ['ENST00000523377.1_1_6:90346782-90346884:-|nuORF'] 72715 23613 MNCSHAFK True H1975_Epitope_Rep3 936.39459279696 936.39348993586 98.503 2 -1.0445274433132397 0.3286271839065406 1.0 ['ENST00000592182.5_1_2:179393182-179402334:+|nuORF', 'ENST00000431259.6_1_2:179396142-179402334:+|nuORF'] 32357 12907 GFGGGGYGGF True NCI_RA007_Epitope_Rep3 874.3609670862198 874.3604149679301 58.036 1 -1.0446876286802558 0.32870146028419883 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 138178 10899 YGNLTETRTL True PC9_epitope_Rep6 1166.59315184902 1166.59150490379 52.787 3 -1.0448096608633741 0.32877142894561073 1.0 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000512955.1_1_3:134086526-134093224:-|nuORF', 'AMOTL2|p.A201Cfs*2|1|0.39|ENSG00000114019|chr3:134370840-134370841|-/A|frameshift_variant'] 93822 7991 RRARTGAA True PC9_epitope_Rep5 857.4943812976098 857.49328993586 35.676 2 -1.0448213794641916 0.32877142894561073 1.0 ['ENST00000398637.9_1_12:46662442-46662643:-|nuORF'] 59967 15866 LGHCGCGR True NCI_RA007_Epitope_Rep3 801.33741227401 801.3368649679301 70.06 1 -1.0448588667458005 0.3288021058421404 1.0 ['ENST00000533173.1_1_8:145676645-145677062:-|nuORF'] 9366 12439 AVSDRVTVL True PC9_epitope_Rep4 958.5447451046199 958.54364993586 55.653 2 -1.0448727748811868 0.3288021058421404 1.0 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 17057 5480 EGGPLEGAAW True PC9_epitope_Rep2 985.4505103666099 985.44940993586 26.474 2 -1.044888790373024 0.3288239916186485 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 126570 15627 VLLSENQLAP True PC9_epitope_Rep2 1082.5971746003 1082.5960699358602 65.386 2 -1.044947418216749 0.3288458768219379 1.0 ['ENSG00000112299|ENST00000367928|VNN1'] 72324 13971 MILIFYTLL True PC9_epitope_Rep5 1125.6507903962902 1125.64915490379 58.762 3 -1.044995992143401 0.3288810318863354 1.0 ['ENST00000496055.5_1_1:76255003-76255042:+|nuORF', 'ENST00000489450.1_1_1:76254988-76255843:+|nuORF'] 92762 12422 RPADIKVVA True PC9_epitope_Rep5 967.5814649665099 967.58036993586 52.78 2 -1.0450107129633668 0.3288810318863354 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1', 'nc|ENSG00000163803|Q6P1J6-5|PLB1', 'ENST00000479065.5_1_2:28829398-28841281:+|nuORF'] 128156 19263 VPLPPGKP True PC9_epitope_Rep1 803.49052470379 803.48942993586 78.897 2 -1.045012724450137 0.3288810318863354 1.0 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 72525 17724 MLIFILPA True NCI_RA007_Epitope_Rep5 916.54559705176 916.54448993586 74.957 2 -1.0450178805839863 0.3288810318863354 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 112153 16897 TIYYHREL True PC9_epitope_Rep1 1093.5556441414901 1093.5545499358602 69.819 2 -1.0450653643947052 0.32888551337619654 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5', 'ENST00000477136.5_1_2:27275826-27278122:+|nuORF', 'ENST00000489683.5_1_2:27275826-27279072:+|nuORF', 'nc|ENSG00000084693|Q8NDL9-3|AGBL5'] 84 8307 AAALRQVV True PC9_epitope_Rep3 826.50248636982 826.5019349679301 36.925 1 -1.0450941080102558 0.32888551337619654 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 125680 25525 VKMMKLHL True PC9_epitope_Rep1 998.5769142633799 998.57580993586 103.18 2 -1.0451919567794856 0.32890774347290963 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 127074 21389 VLSVPAVSV True PC9_epitope_Rep5 869.52221875489 869.52167496793 87.334 1 -1.0451950139410464 0.32890774347290963 1.0 ['ENST00000564333.1_1_16:2487101-2487449:+|nuORF'] 108972 18648 TAFEGRRAV True PC9_epitope_Rep6 1005.5355774032498 1005.53448993586 84.373 2 -1.0451950176524534 0.32890774347290963 1.0 ['F13A1|p.G10E|1|0.19|ENSG00000124491|chr6:6318636-6318636|C/T|missense_variant'] 58864 12529 LESVWYQN True NCI_RA007_Epitope_Rep2 1037.48181049489 1037.4807099358602 53.349 2 -1.045196523223552 0.32890774347290963 1.0 ['ENST00000379958.2_1_7:92735396-92747190:-|nuORF'] 89931 16879 RCVIHPLHSSL True PC9_epitope_Rep5 1260.67611071068 1260.67447490379 69.935 3 -1.0452150344020976 0.32890774347290963 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 7843 11722 ASWDRLPGP True PC9_epitope_Rep3 997.4981292653699 997.49702993586 50.107 2 -1.0452319804728425 0.32890774347290963 1.0 ['ENST00000568763.1_1_16:30197335-30197653:+|nuORF'] 105968 14797 SSSSSSSS True PC9_epitope_Rep1 714.2667919178601 714.2662449679301 61.737 1 -1.0452405220698797 0.32890774347290963 1.0 ['nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'nc|ENSG00000158458|O14511-6|NRG2', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000105722|P50548-2|ERF', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000170166|ENST00000306324|HOXD4', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'EPHB6|p.R238Hfs*37|1|0.35|ENSG00000106123|chr7:142864513-142864513|G/-|frameshift_variant', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENSG00000070423|ENST00000292363|RNF126', 'KLHL1|p.V595*|1|0.11|ENSG00000150361|chr13:69740413-69740413|C/-|frameshift_variant', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000158458|O14511-2|NRG2', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'HEG1|p.A969Cfs*53|1|0.53|ENSG00000173706|chr3:125012674-125012675|-/A|frameshift_variant', 'ENSG00000173706|ENST00000311127|HEG1', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'KLHL1|p.T475Nfs*6|1|0.1|ENSG00000150361|chr13:69796953-69796954|-/T|frameshift_variant', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000185737|ENST00000372141|NRG3', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'SRRM2|p.S2535L|1|0.33|ENSG00000167978|chr16:2768132-2768132|C/T|missense_variant', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'KLHL1|p.S73Y|1|0.13|ENSG00000150361|chr13:70107482-70107482|G/T|missense_variant', 'PPRC1|p.S1499F|1|0.11|ENSG00000148840|chr10:102148467-102148467|C/T|missense_variant', 'NOLC1|p.D228Y|1|0.44|ENSG00000166197|chr10:102159267-102159267|G/T|missense_variant', 'SALL1|p.S151I|1|0.15|ENSG00000103449|chr16:51141770-51141770|C/A|missense_variant', 'NAF1|p.S142C|1|0.38|ENSG00000145414|chr4:163164332-163164332|G/C|missense_variant', 'MLLT3|p.S192T|1|0.35|ENSG00000171843|chr9:20414271-20414271|C/G|missense_variant', 'MLLT3|p.P394A|1|0.2|ENSG00000171843|chr9:20365690-20365690|G/C|missense_variant', 'KMT2A|p.S98L|1|0.26|ENSG00000118058|chr11:118436805-118436805|C/T|missense_variant', 'SALL1|p.G162D|1|0.31|ENSG00000103449|chr16:51141737-51141737|C/T|missense_variant', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'KLHL1|p.P82R|1|0.15|ENSG00000150361|chr13:70107455-70107455|G/C|missense_variant', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'CUL4B|p.D214Rfs*9|1|0.09|ENSG00000158290|chrX:120557988-120558010|TTCAGTTTTTGCCAGGTTTCATC/-|frameshift_variant', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'NR1D1|p.E173Rfs*52|1|0.21|ENSG00000126368|chr17:40096530-40096530|C/-|frameshift_variant', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'FAM133A|p.E121Afs*38|1|0.13|ENSG00000179083|chrX:93709780-93709781|-/CT|frameshift_variant', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'KLHL1|p.Q110Rfs*16|1|0.27|ENSG00000150361|chr13:70107373-70107373|C/-|frameshift_variant', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENSG00000165821|ENST00000537235|SALL2', 'nc|ENSG00000165821|Q9Y467|SALL2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'CAMTA2|p.S480Efs*4|1|0.04|ENSG00000108509|chr17:4979884-4979885|-/ATTTGTCTTC|frameshift_variant', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ENSG00000196581|ENST00000378191|AJAP1', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENSG00000165757|ENST00000375377|JCAD', 'DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000108312|ENST00000436088|UBTF', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ENSG00000111676|ENST00000396684|ATN1', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'KDM6B|p.P829Lfs*65|1|0.19|ENSG00000132510|chr17:7848771-7848771|G/-|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'ENSG00000138398|ENST00000260970|PPIG', 'nc|ENSG00000138398|Q13427-2|PPIG', 'PPIG|p.M372Gfs*6|1|0.09|ENSG00000138398|chr2:169636184-169636217|AAGAATGAGGGTATCAAGTGGTGAAAGATGGATC/-|frameshift_variant', 'PPIG|p.K427Ifs*28|1|0.09|ENSG00000138398|chr2:169636537-169636538|-/TTAGG|frameshift_variant', 'PPIG|p.R302Kfs*13|1|0.09|ENSG00000138398|chr2:169631908-169631909|-/AGTTACAGTT|frameshift_variant', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000163623|ENST00000295886|NKX6-1', 'FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENSG00000105866|ENST00000222584|SP4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'ENSG00000150361|ENST00000377844|KLHL1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000162923|ENST00000414423|WDR26', 'ENSG00000169291|ENST00000304760|SHE', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF'] 141239 8069 YTDEAVVIK True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 35.985 2 -1.0452901164000024 0.3289122237352048 1.0 ['nc|ENSG00000005700|Q9P2D0-2|IBTK', 'ENST00000369751.2_1_6:82901346-82950269:-|nuORF', 'ENSG00000005700|ENST00000306270|IBTK', 'ENST00000505222.5_1_6:82901346-82950269:-|nuORF'] 102782 4541 SNNDDDED True H1975_Epitope_Rep1 922.27881315354 922.27770993586 22.494 2 -1.0452969043146247 0.3289122237352048 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 135649 4772 WLLRQKEQLQQ True PC9_epitope_Rep5 1468.81504671164 1468.81339490379 23.401 3 -1.045349915646179 0.32895615401736034 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 98607 10298 SFSYKSSLR True NCI_RA007_Epitope_Rep4 1073.5505587610498 1073.54946993586 46.468 2 -1.0453798772827727 0.32895615401736034 1.0 ['ENSG00000258405|ENST00000421239|ZNF578'] 74947 23119 NHLYVQRRL True NCI_RA007_Epitope_Rep5 1197.6730739355698 1197.67141490379 96.178 3 -1.045383409429982 0.32895615401736034 1.0 ['ENST00000471198.1_1_3:167344976-167371234:-|nuORF'] 15535 10012 EAPGFSNTSL True NCI_RA007_Epitope_Rep5 1021.4716397340101 1021.47054993586 45.152 2 -1.0453901185449703 0.32895615401736034 1.0 ['ENSG00000069248|ENST00000261396|NUP133'] 125681 25609 VKMMKLHL True PC9_epitope_Rep1 998.5769142633799 998.57580993586 103.53 2 -1.0454072361013025 0.32895615401736034 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 98510 3486 SFLMKHKSRK True NCI_RA007_Epitope_Rep2 1260.7124962194 1260.71086490379 18.213 3 -1.0454753480286074 0.32899112356314314 1.0 ['nc|ENSG00000104228|Q9UPQ4-2|TRIM35', 'ENSG00000104228|ENST00000305364|TRIM35'] 89103 4737 QVPNFHKCEIC True H1975_Epitope_Rep3 1316.6005628119199 1316.59891490379 23.346 3 -1.0455205598236579 0.3289912941022452 1.0 ['nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'nc|ENSG00000130856|Q9UL36-2|ZNF236', 'ZNF236|p.P200Rfs*13|1|0.28|ENSG00000130856|chr18:76871762-76871762|C/-|frameshift_variant'] 47140 14447 ITVNADYVISL True PC9_epitope_Rep4 1206.6496040959798 1206.6485099358601 63.479 2 -1.0455346218427213 0.3289912941022452 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'CSMD3|p.K2636*|1|0.27|ENSG00000164796|chr8:112306173-112306174|-/T|frameshift_variant', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.G3441Afs*4|1|0.37|ENSG00000164796|chr8:112244476-112244476|A/-|frameshift_variant', 'CSMD3|p.I3465Ffs*10|1|0.57|ENSG00000164796|chr8:112244404-112244404|G/-|frameshift_variant', 'CSMD3|p.Y3650Ffs*51|1|0.41|ENSG00000164796|chr8:112228771-112228771|T/-|frameshift_variant', 'CSMD3|p.P1779Qfs*14|1|0.09|ENSG00000164796|chr8:112472650-112472650|G/-|frameshift_variant', 'CSMD3|p.G1744Efs*49|1|0.34|ENSG00000164796|chr8:112492536-112492536|C/-|frameshift_variant', 'CSMD3|p.R1946Pfs*18|1|0.24|ENSG00000164796|chr8:112390761-112390761|C/-|frameshift_variant', 'CSMD3|p.V2384Cfs*22|1|0.31|ENSG00000164796|chr8:112335344-112335345|-/A|frameshift_variant', 'CSMD3|p.S2465Yfs*11|1|0.21|ENSG00000164796|chr8:112314583-112314584|AG/-|frameshift_variant'] 928 8884 ADNAIPKSET True H1975_Epitope_Rep3 1044.50875351872 1044.5076499358602 39.173 2 -1.0455563281444693 0.3289912941022452 1.0 ['ENSG00000145309|ENST00000273936|CABS1'] 133380 25621 VVVGVGLIVG True PC9_epitope_Rep5 910.5851533646199 910.5846049679301 103.88 1 -1.045680252202882 0.32905244416516116 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 69765 24886 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 104.24 3 -1.0456867596696628 0.3290874101614149 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 18999 8417 ELERLHPI True PC9_epitope_Rep1 1005.5607295219299 1005.55962993586 37.212 2 -1.0457186713672064 0.32912237524218463 1.0 ['ENST00000610158.1_1_10:25242209-25242413:+|nuORF'] 55843 13152 LAPPLPSAS True PC9_epitope_Rep3 851.4752685624701 851.47416993586 55.619 2 -1.0457884732328477 0.3291442485174567 1.0 ['nc|ENSG00000147050|O15550|KDM6A', 'ENSG00000147050|ENST00000611820|KDM6A'] 47104 10715 ITTRPNRIYMT True H1975_Epitope_Rep1 1364.7234548259198 1364.7223499358602 46.177 2 -1.0458641501246826 0.3291530305013745 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 124048 6107 VGSITETL True NCI_RA007_Epitope_Rep3 818.43854870058 818.43744993586 31.01 2 -1.0459104138640347 0.3291749028026862 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 32505 10276 GGENLEFSF True H1975_Epitope_Rep2 998.4345259493 998.43342993586 44.533 2 -1.0459256615451422 0.32918368415540894 1.0 ['ENSG00000119514|ENST00000375011|GALNT12', 'nc|ENSG00000119514|Q8IXK2-2|GALNT12'] 71017 17301 LYIPSDFF True H1975_Epitope_Rep3 1000.4905842734399 1000.49007496793 72.2 1 -1.045968885890398 0.3292014084322683 1.0 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1', 'CCAR1|p.T1062Ifs*11|1|0.15|ENSG00000060339|chr10:68788325-68788326|-/TATAC|frameshift_variant'] 63809 18530 LNHEMYEA True PC9_epitope_Rep5 1005.4225813666098 1005.42148993586 76.299 2 -1.0460191262407896 0.3292014084322683 1.0 ['nc|ENSG00000069535|P27338-2|MAOB', 'ENSG00000069535|ENST00000378069|MAOB'] 99896 19969 SILWLWLWL True NCI_RA007_Epitope_Rep2 1228.7008518231999 1228.70027496793 82.675 1 -1.0460226219306217 0.3292014084322683 1.0 ['ENST00000491383.5_1_2:86716620-86718467:+|nuORF'] 47643 14065 IWETFRRWHRK True NCI_RA007_Epitope_Rep2 1613.86914797317 1613.8680499358602 59.369 2 -1.0460280345339985 0.3292014084322683 1.0 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 66289 6725 LSFLQKVSARP True H1975_Epitope_Rep2 1244.7241064489199 1244.72245490379 30.782 3 -1.0460312866664505 0.3292014084322683 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 62206 10366 LLESDYFRYYK True H1975_Epitope_Rep1 1495.7347307022699 1495.73362993586 44.821 2 -1.0461102782671856 0.32922327809628527 1.0 ['ENSG00000197930|ENST00000395686|ERO1A'] 85566 5889 QGEVTVASIDD True NCI_RA007_Epitope_Rep4 1132.52479750568 1132.52370993586 29.275 2 -1.0461441830814622 0.3292320580112305 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 80166 12532 PFTARPLSFW True PC9_epitope_Rep4 1220.6342288153598 1220.63312993586 56.023 2 -1.046164280726096 0.32924083769633505 1.0 ['ENST00000394048.9_1_12:56537649-56537871:+|nuORF'] 123019 20752 VGIKGRRGDRR True PC9_epitope_Rep4 1268.7537838677597 1268.7526899358602 87.978 2 -1.0461856194708574 0.32924530771445776 1.0 ['ENST00000525051.5_1_8:144875319-144875475:-|nuORF'] 109493 9628 TDLRLHSGEVK True H1975_Epitope_Rep3 1253.67279915205 1253.67170993586 42.05 2 -1.0461932648405863 0.32924530771445776 1.0 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 3869 6931 AGYPVYKYVPY True NCI_RA007_Epitope_Rep1 1318.65977485686 1318.6581149037902 30.964 3 -1.0462073096063402 0.3292759541385268 1.0 ['ENST00000313755.9_1_22:18900690-18907344:-|nuORF', 'nc|ENSG00000100033|O43272-2|PRODH', 'nc|ENSG00000100033|O43272-1|PRODH', 'ENSG00000100033|ENST00000357068|PRODH'] 80226 20627 PGAHTTTI True PC9_epitope_Rep3 796.4079172786401 796.40682993586 84.613 2 -1.0462089926842895 0.3292759541385268 1.0 ['nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2', 'ENST00000471736.5_1_4:158142110-158255356:+|nuORF'] 139453 16714 YLQEIQTQL True PC9_epitope_Rep5 1134.5920892198599 1134.59098993586 69.297 2 -1.0463542103643728 0.32929782082324455 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'nc|ENSG00000138468|Q9BQF6-4|SENP7'] 66004 17554 LSEAQLSLIR True PC9_epitope_Rep3 1128.65027280232 1128.64861490379 72.707 3 -1.0463783137811336 0.329306598958197 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 141583 17034 YTQDQHLHNF True PC9_epitope_Rep5 1301.5788987672101 1301.5778099358602 70.539 2 -1.0464133848281862 0.32932846466946747 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 100832 16882 SLELEQPPAS True PC9_epitope_Rep5 1069.5291546101298 1069.52804993586 69.949 2 -1.046414777257158 0.3293330890436057 1.0 ['ENSG00000120278|ENST00000696526|PLEKHG1'] 19894 13954 ELTQTRLQKIW True H1975_Epitope_Rep1 1414.7932486379 1414.7921499358602 58.829 2 -1.0464674004408898 0.3293330890436057 1.0 ['ENSG00000158571|ENST00000375006|PFKFB1'] 135976 141 WQKYVEQSNNW True NCI_RA007_Epitope_Rep1 1480.6735274280397 1480.67242993586 0.74594 2 -1.0464769369081381 0.3293330890436057 1.0 ['ENST00000397128.6_1_5:40764735-40764909:-|nuORF'] 133303 25496 VVTVGVITVL True PC9_epitope_Rep1 998.6375828603 998.63703496793 103.06 1 -1.0464788623115007 0.3293330890436057 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 15394 7121 EAIFPIYP True H1975_Epitope_Rep3 948.49566965388 948.49456993586 32.361 2 -1.0464809460827098 0.3293330890436057 1.0 ['nc|ENSG00000140481|Q8N5R6|CCDC33', 'nc|ENSG00000140481|Q8N5R6-2|CCDC33', 'ENST00000560148.5_2_15:74510872-74513593:+|nuORF'] 81079 14540 PISMNHGVHF True H1975_Epitope_Rep2 1137.5389485315297 1137.53784993586 61.085 2 -1.0465109395473968 0.32934186591286824 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 112633 13257 TLFDVECKEGG True PC9_epitope_Rep1 1196.5383393948398 1196.53669490379 55.859 3 -1.0465597012107004 0.3293507989060026 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 126403 21857 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 94.745 3 -1.0465882995500475 0.3293507989060026 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 80355 5996 PGGPRPAAPGP True PC9_epitope_Rep5 972.5141136826797 972.5130099358599 28.06 2 -1.0465914159950913 0.3293507989060026 1.0 ['ENST00000590056.1_1_18:61033898-61034411:-|nuORF', 'ENST00000587292.1_1_18:61033532-61034411:-|nuORF', 'ENST00000589530.5_1_18:61022616-61034411:-|nuORF'] 117192 13572 TVLGERHLP True PC9_epitope_Rep2 1020.5716285588001 1020.57052993586 57.498 2 -1.0466011173701562 0.3293507989060026 1.0 ['ENSG00000197417|ENST00000225519|SHPK'] 119831 11320 VDCVKKLL True NCI_RA007_Epitope_Rep4 916.5415743004799 916.54046993586 50.438 2 -1.0466586737384032 0.3294119186579078 1.0 ['nc|ENSG00000165192|Q8WXH4-3|ASB11', 'nc|ENSG00000165192|Q8WXH4-2|ASB11', 'ENSG00000165192|ENST00000480796|ASB11'] 97017 14648 SCGFDAGD True NCI_RA007_Epitope_Rep5 770.25411905918 770.25357496793 63.011 1 -1.0467186747344472 0.32942069380651406 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'ENST00000552009.1_1_12:102159833-102159905:-|nuORF'] 55442 14631 LAFKERLYGP True H1975_Epitope_Rep3 1192.6604435631998 1192.65934993586 61.646 2 -1.0467551672413846 0.3294294687254645 1.0 ['nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-4|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-5|EP400P1'] 63906 11179 LNQAMQQEV True PC9_epitope_Rep4 1059.50189431647 1059.5007899358602 50.779 2 -1.0468476872793628 0.3294774996401513 1.0 ['ENST00000326019.10_1_2:27886341-27886545:+|nuORF'] 15805 7843 EDDVRFEHQFK True NCI_RA007_Epitope_Rep1 1448.6684420475997 1448.66734993586 34.498 2 -1.0468883039823935 0.3294819622364995 1.0 ['ENSG00000198756|ENST00000361927|COLGALT2'] 111647 15547 TIDWYRFFCLW True H1975_Epitope_Rep1 1548.7223921967598 1548.72128993586 65.082 2 -1.04689239297301 0.3294819622364995 1.0 ['ENSG00000051341|ENST00000264233|POLQ'] 67185 5202 LSRAWGHR True NCI_RA007_Epitope_Rep1 981.5256814258901 981.52458993586 24.317 2 -1.0469160480187913 0.3294907358944834 1.0 ['ENST00000490500.5_3_1:33117091-33117256:+|nuORF'] 2420 5068 AEQFLRPFLG True H1975_Epitope_Rep1 1176.6291434349198 1176.6280499358602 24.565 2 -1.0471346758902083 0.32957801766437683 1.0 ['ENST00000328086.11_1_16:25268599-25269199:-|nuORF'] 43310 12758 IFVKCGRI True NCI_RA007_Epitope_Rep3 934.5422430068198 934.54114993586 57.419 2 -1.0471648561732825 0.3295998743882972 1.0 ['HIVEP3|p.G420V|1|0.77|ENSG00000127124|chr1:41583539-41583539|C/A|missense_variant'] 36855 15631 GVLKKVIRHKR True PC9_epitope_Rep4 1332.8830071321597 1332.88135490379 68.048 3 -1.0472349904629623 0.3296217305402541 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 15549 13418 EAPQHRDADIV True PC9_epitope_Rep1 1249.60511351505 1249.6040099358602 56.473 2 -1.047263090580441 0.32962618901202423 1.0 ['ENSG00000178965|ENST00000326665|ERICH3', 'nc|ENSG00000178965|Q5RHP9-2|ERICH3', 'ENST00000433746.2_1_1:75036803-75045091:-|nuORF'] 102053 4589 SLQWRHRWDTP True PC9_epitope_Rep3 1480.7323797168397 1480.73074490379 22.746 3 -1.0472680121394538 0.32962618901202423 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 66935 11610 LSNTVIPL True PC9_epitope_Rep4 855.5065686907499 855.50546993586 52.418 2 -1.0473344719439135 0.3296611278293864 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2'] 137340 24002 YDLKQNSFFGD True PC9_epitope_Rep3 1332.59863115228 1332.5969849037901 97.611 3 -1.047366499813126 0.3296698983396789 1.0 ['ENST00000459719.6_1_Y:21751496-21752137:+|nuORF'] 83576 18767 PVALSTPAL True PC9_epitope_Rep6 867.50656869075 867.50546993586 84.826 2 -1.0474379809432677 0.3297048356709232 1.0 ['ENST00000433126.1_1_20:61296516-61296777:-|nuORF'] 19995 4646 ELWTWMEDLQK True NCI_RA007_Epitope_Rep2 1477.69115163813 1477.68949490379 22.698 3 -1.0474660619187344 0.3297136053798752 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF'] 424 17004 AALMSSSARH True PC9_epitope_Rep6 1029.50256302281 1029.50146993586 77.957 2 -1.0475812978788506 0.32974422712108326 1.0 ['ENST00000430252.6_1_6:116579721-116579832:+|nuORF'] 120014 7096 VDRLVLESP True NCI_RA007_Epitope_Rep1 1026.57095985246 1026.5698699358602 31.595 2 -1.0475817351544532 0.32974422712108326 1.0 ['ENSG00000183763|ENST00000331456|TRAIP'] 132729 7005 VVHTRERP True NCI_RA007_Epitope_Rep2 992.5515618205599 992.55046993586 31.87 2 -1.047594820022825 0.32975299597048513 1.0 ['ENSG00000261221|ENST00000568956|ZNF865'] 66520 22645 LSHMPLWRRWM True PC9_epitope_Rep5 1511.76421452243 1511.76310993586 92.105 2 -1.0476312389260172 0.3297574504827442 1.0 ['ENST00000391992.3_1_12:9181361-9181625:-|nuORF'] 113939 7545 TPAAFAGK True NCI_RA007_Epitope_Rep4 761.40718900265 761.40608993586 35.667 2 -1.0476350714702336 0.3297574504827442 1.0 ['RSAD2|p.D213Ifs*8|1|0.6|ENSG00000134321|chr2:6887061-6887061|G/-|frameshift_variant', 'ENSG00000134321|ENST00000382040|RSAD2'] 2664 4939 AESNQQFRDL True H1975_Epitope_Rep2 1206.5629143499 1206.56180993586 24.081 2 -1.0477595140216767 0.3298447127775089 1.0 ['ENSG00000196427|ENST00000415641|NBPF4', 'ENSG00000186086|ENST00000495380|NBPF6', 'nc|ENSG00000186086|Q5VWK0-2|NBPF6', 'nc|ENSG00000243967|Q86XG9|NBPF5P'] 80403 19441 PGIMYLTTV True PC9_epitope_Rep5 993.52050450273 993.51940993586 79.831 2 -1.047855327697546 0.32990149265446556 1.0 ['nc|ENSG00000186185|Q86Y91-6|KIF18B', 'ENSG00000186185|ENST00000593135|KIF18B'] 61293 15925 LIQDRITL True PC9_epitope_Rep1 970.58113061334 970.58002993586 66.065 2 -1.0478696882425782 0.32990149265446556 1.0 ['ENST00000477564.5_1_22:42968458-42968503:+|nuORF'] 65594 22364 LRVRRDLQRQ True PC9_epitope_Rep6 1338.7956486797398 1338.79399490379 98.994 3 -1.047918933744345 0.32992779027785046 1.0 ['ENST00000421812.2_1_1:120165667-120165793:-|nuORF'] 135943 8132 WPWRRRKKRVP True PC9_epitope_Rep2 1563.9375023165096 1563.9358649037902 36.637 3 -1.0479433612097266 0.32992779027785046 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 65085 15951 LQLNLRPVDV True PC9_epitope_Rep5 1165.68190728377 1165.68080993586 66.344 2 -1.0479470668655793 0.32992779027785046 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 127928 17960 VPGVLAVAP True PC9_epitope_Rep3 821.50108938749 821.5005449679301 74.287 1 -1.04807970909149 0.32994532088009837 1.0 ['ENST00000337304.2_1_22:39916921-39917209:+|nuORF'] 124922 8660 VHRRQPLPP True PC9_epitope_Rep1 1098.6410455312998 1098.6399499358602 38.149 2 -1.048104589731414 0.32994532088009837 1.0 ['PAX7|p.P326R|1|0.35|ENSG00000009709|chr1:18703118-18703118|C/G|missense_variant'] 108610 6470 SYPHLVSARP True NCI_RA007_Epitope_Rep5 1125.59309227937 1125.59198993586 31.552 2 -1.0482527922476454 0.33001517371285055 1.0 ['ENST00000498526.1_1_2:130897068-130897428:-|nuORF'] 20967 5300 EQQDNPHF True H1975_Epitope_Rep1 1013.4202728674899 1013.4191699358599 25.447 2 -1.0482728788742157 0.33001517371285055 1.0 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.L266Hfs*3|1|0.07|ENSG00000163728|chr3:180604946-180604947|-/AT|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 36730 5371 GVKGAKIK True NCI_RA007_Epitope_Rep3 799.5279728416699 799.52686993586 28.134 2 -1.048308980280135 0.33004185194873137 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 64395 18546 LPLREVVSI True PC9_epitope_Rep5 1024.62808080576 1024.6269899358601 76.36 2 -1.0483126065227986 0.33004185194873137 1.0 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 119300 13802 VALVEDLQKQP True NCI_RA007_Epitope_Rep1 1238.6870522338597 1238.6859499358602 57.704 2 -1.0483385503372753 0.33004185194873137 1.0 ['ENST00000574928.5_1_16:3185143-3187740:+|nuORF', 'ENSG00000085644|ENST00000396878|ZNF213'] 120883 10771 VENGGVTR True H1975_Epitope_Rep3 830.42462997194 830.4240849679301 46.511 1 -1.0483640009220498 0.33004185194873137 1.0 ['ENSG00000118804|ENST00000237642|STBD1'] 24473 9792 FAEFEDFPET True H1975_Epitope_Rep1 1230.5080848123798 1230.50698993586 42.592 2 -1.0483667048188867 0.33004185194873137 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000468018.5_1_2:242577129-242590612:+|nuORF', 'ENST00000494465.5_1_2:242577129-242592771:+|nuORF', 'ENST00000430617.6_3_2:242577147-242592771:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 4197 5643 AIAEAEELGEL True NCI_RA007_Epitope_Rep2 1143.5659340416698 1143.56537496793 26.564 1 -1.0483861255970208 0.33004185194873137 1.0 ['KRT7|p.R342L|1|0.34|ENSG00000135480|chr12:52245452-52245452|G/T|missense_variant'] 65790 14640 LSDIFRVVP True PC9_epitope_Rep2 1044.59678067748 1044.59568993586 61.581 2 -1.0484578357197158 0.33004185194873137 1.0 ['nc|ENSG00000151892|P56159-2|GFRA1', 'ENSG00000151892|ENST00000355422|GFRA1'] 6269 5119 APRFKDFQR True NCI_RA007_Epitope_Rep4 1163.6199757335498 1163.6183249037902 26.205 3 -1.0484984518047011 0.33004185194873137 1.0 ['nc|ENSG00000176845|Q641Q3-2|METRNL', 'ENSG00000176845|ENST00000320095|METRNL'] 98732 24595 SGGGGGGGGD True PC9_epitope_Rep5 676.24124587636 676.24069496793 99.721 1 -1.048522496663255 0.33004185194873137 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 75254 10882 NIERPVRRRHS True NCI_RA007_Epitope_Rep1 1418.7967113088998 1418.79560993586 46.32 2 -1.0485266544821588 0.33004185194873137 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 105916 8323 SSSDDADLPP True H1975_Epitope_Rep2 1002.4141844275399 1002.41308993586 36.964 2 -1.0485280894357958 0.33004185194873137 1.0 ['ENSG00000185862|ENST00000330927|EVI2B', 'nc|ENSG00000185862|P34910-2|EVI2B'] 22589 6637 ETLEKQVK True NCI_RA007_Epitope_Rep1 973.54441075145 973.54330993586 29.83 2 -1.0485362751517702 0.33004185194873137 1.0 ['ENSG00000144820|ENST00000273352|ADGRG7'] 137432 6299 YEDESRKETNK True NCI_RA007_Epitope_Rep2 1397.6422868694096 1397.6411899358602 29.108 2 -1.0485631741987802 0.33007677116438444 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ANO6|p.G599Afs*6|1|0.46|ENSG00000177119|chr12:45403451-45403451|G/-|frameshift_variant', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 68192 6550 LTDSLVC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 934.47936824617 934.47826993586 30.09 2 -1.0486055647205046 0.3301247678585441 1.0 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.D110*|1|0.31|ENSG00000167658|chr19:3983182-3983183|-/A|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 112122 14502 TIWSLWQQ True PC9_epitope_Rep4 1060.53418042092 1060.53308993586 63.695 2 -1.0486260836812311 0.330124893742235 1.0 ['nc|ENSG00000184619|Q6ZNG9|KRBA2'] 126031 7182 VLDWEGEDILD True H1975_Epitope_Rep3 1302.5979624459399 1302.59686993586 32.6 2 -1.0486327180306827 0.330124893742235 1.0 ['nc|ENSG00000131089|O43307-3|ARHGEF9', 'nc|ENSG00000131089|O43307-2|ARHGEF9', 'nc|ENSG00000131089|O43307|ARHGEF9', 'ENSG00000131089|ENST00000671741|ARHGEF9'] 98492 13655 SFKEELVEIE True NCI_RA007_Epitope_Rep5 1221.6128842340897 1221.61123490379 59.207 3 -1.0486747571964985 0.330124893742235 1.0 ['TUBGCP5|p.A380V|1|0.17|ENSG00000275835|chr15:23023976-23023976|G/A|missense_variant'] 118871 17138 VAAVWPYRR True PC9_epitope_Rep2 1116.6192474575598 1116.6181499358602 71.169 2 -1.0487350407798883 0.3301728872963147 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'ATP13A1|p.M861Vfs*15|1|0.11|ENSG00000105726|chr19:19649617-19649618|AT/-|frameshift_variant', 'ENST00000487364.1_1_19:19771386-19774475:-|nuORF'] 45085 17667 IPIWLYWRIWH True PC9_epitope_Rep6 1581.86087470525 1581.85921490379 80.595 3 -1.04873663269165 0.33018164698497393 1.0 ['ENST00000467733.1_1_3:156262080-156272878:-|nuORF', 'ENSG00000114850|ENST00000265044|SSR3', 'nc|ENSG00000114850|Q9UNL2-2|SSR3'] 123849 13837 VGRPKNAP True PC9_epitope_Rep1 837.4820852784098 837.48098993586 58.066 2 -1.048918898131536 0.33028638681836014 1.0 ['ENSG00000180543|ENST00000322128|TSPYL5'] 127929 17848 VPGVLAVAP True PC9_epitope_Rep5 821.50108938749 821.5005449679301 73.671 1 -1.0489252724535765 0.33028638681836014 1.0 ['ENST00000337304.2_1_22:39916921-39917209:+|nuORF'] 98731 23647 SGGGGGGGGD True PC9_epitope_Rep4 676.24124587636 676.24069496793 99.302 1 -1.048933454072509 0.33028638681836014 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 41922 9728 IDCDYFYENQ True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 42.387 2 -1.0489860194766343 0.3302995828593098 1.0 ['AKR1B15|p.A74D|1|0.39|ENSG00000227471|chr7:134568228-134568228|C/A|missense_variant'] 91221 19405 RGEDAGKQVP True H1975_Epitope_Rep2 1055.53597132607 1055.5348699358601 80.54 2 -1.0490357295228812 0.3302995828593098 1.0 ['ENST00000487560.1_1_2:70417790-70417934:-|nuORF'] 58507 11943 LEQENHSL True PC9_epitope_Rep3 968.45632402304 968.45522993586 50.959 2 -1.049043143644574 0.3302995828593098 1.0 ['ENSG00000234409|ENST00000439765|CCDC188', 'ENST00000512987.1_1_22:23735173-23735854:+|nuORF'] 79345 16363 PARRVSRSSF True H1975_Epitope_Rep3 1161.6366884268498 1161.63558993586 68.414 2 -1.0490619823170249 0.33030834008944215 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.G1202Afs*15|1|0.05|ENSG00000148773|chr10:128108220-128108235|CTGCCAGGTAAAGTTC/-|frameshift_variant', 'MKI67|p.W954Cfs*12|1|0.03|ENSG00000148773|chr10:128108978-128108979|-/AA|frameshift_variant', 'MKI67|p.L501Vfs*16|1|0.07|ENSG00000148773|chr10:128113583-128113584|-/TACT|frameshift_variant'] 14572 18745 DTVFHVFDK True PC9_epitope_Rep1 1106.53965972418 1106.53856993586 76.89 2 -1.049094433607133 0.3303127778649511 1.0 ['ENSG00000083520|ENST00000377767|DIS3', 'DIS3|p.N943Tfs*12|1|0.53|ENSG00000083520|chr13:72759844-72759844|T/-|frameshift_variant', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 127842 25092 VPFLELIG True PC9_epitope_Rep5 886.5164050984599 886.51530993586 101.66 2 -1.0491165771433226 0.3303127778649511 1.0 ['ENSG00000177150|ENST00000651643|FAM210A'] 135352 17826 WGPFQRLIF True NCI_RA007_Epitope_Rep3 1162.6287495120998 1162.62764993586 78.162 2 -1.04922766444032 0.330343366719841 1.0 ['ENSG00000197208|ENST00000200652|SLC22A4', 'ENSG00000197375|ENST00000245407|SLC22A5', 'nc|ENSG00000197375|O76082-3|SLC22A5'] 2092 9863 AELERNVAL True PC9_epitope_Rep4 1013.55055876105 1013.54946993586 45.589 2 -1.0492421344224787 0.330343366719841 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant'] 131762 12553 VTPQRSLTL True PC9_epitope_Rep4 1013.58694426977 1013.58584993586 56.106 2 -1.0492598277463334 0.3303651982897266 1.0 ['ENST00000597909.5_2_19:53394572-53400921:-|nuORF'] 120227 11890 VEASRLSQI True PC9_epitope_Rep3 1001.5505587610498 1001.54946993586 50.755 2 -1.0493157694290893 0.33038270943110054 1.0 ['ENST00000471073.1_1_22:21355994-21356078:-|nuORF'] 98733 24681 SGGGGGGGGD True PC9_epitope_Rep5 676.24124587636 676.24069496793 100.06 1 -1.0493180932586734 0.33038270943110054 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 18047 21771 EIFEVDFRDP True PC9_epitope_Rep1 1265.5928174958499 1265.59172993586 88.576 2 -1.0493231066418267 0.330391464658351 1.0 ['nc|ENSG00000075826|Q9NQW1-3|SEC31B', 'nc|ENSG00000075826|Q9NQW1-2|SEC31B', 'nc|ENSG00000075826|Q9NQW1-4|SEC31B', 'nc|ENSG00000075826|Q9NQW1-5|SEC31B', 'ENSG00000075826|ENST00000370345|SEC31B'] 36607 8259 GVHVLTGVSA True PC9_epitope_Rep2 938.5185303567799 938.51742993586 37.127 2 -1.049340811210566 0.3304002196566557 1.0 ['ENST00000496704.1_1_2:130899553-130900555:-|nuORF'] 37028 2816 GVPEAEVTWFR True NCI_RA007_Epitope_Rep2 1289.6404363946099 1289.63878490379 15.281 3 -1.0493811567034599 0.3304220490560117 1.0 ['ADAMTSL1|p.C1678Vfs*28|1|0.41|ENSG00000178031|chr9:18906759-18906760|-/T|frameshift_variant', 'ADAMTSL1|p.N1700Tfs*41|1|0.33|ENSG00000178031|chr9:18906826-18906826|C/-|frameshift_variant', 'ENSG00000178031|ENST00000380548|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF', 'nc|ENSG00000178031|Q8N6G6-5|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-6|ADAMTSL1'] 33822 10958 GLMLYFRIRFY True NCI_RA007_Epitope_Rep1 1477.7904121869296 1477.78930993586 46.619 2 -1.0494316564420314 0.33044387788455254 1.0 ['TYK2|p.S98G|1|0.09|ENSG00000105397|chr19:10368320-10368320|T/C|missense_variant'] 104575 14527 SQQSSLLTV True PC9_epitope_Rep6 961.5080252427299 961.5074749679301 67.768 1 -1.0495105713148025 0.33046570614230053 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 141717 20906 YTVQSLETDL True PC9_epitope_Rep6 1167.5659340416698 1167.5648299358602 93.187 2 -1.0495823916812161 0.3305050399403836 1.0 ['ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 113209 13876 TLQILFFLVS True H1975_Epitope_Rep1 1179.69034670915 1179.68924993586 58.523 2 -1.049583086276936 0.3305050399403836 1.0 ['ENSG00000170915|ENST00000442253|PAQR8'] 100560 15882 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 69.021 2 -1.049589559598562 0.3305050399403836 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 22153 6810 ESSGTFSAH True NCI_RA007_Epitope_Rep3 921.3828247296101 921.38172993586 33.891 2 -1.049610069915332 0.3305137926526343 1.0 ['ENST00000531874.1_1_1:85437659-85462600:-|nuORF'] 83647 12178 PVEAADFGERL True PC9_epitope_Rep3 1202.59315184902 1202.5920499358601 51.879 2 -1.0496606285417278 0.33052708638360173 1.0 ['ENSG00000132825|ENST00000370996|PPP1R3D'] 61646 6108 LKQRTWMEEHY True PC9_epitope_Rep4 1519.7241831019098 1519.7225249037901 30.503 3 -1.0496647018731027 0.33052708638360173 1.0 ['ENST00000504321.1_1_4:56755058-56759725:+|nuORF'] 22537 3920 ETHIRVPA True PC9_epitope_Rep4 921.50321464581 921.50210993586 21.269 2 -1.0496711390969427 0.33052708638360173 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 99202 12992 SHLGTPPA True PC9_epitope_Rep2 778.39735259494 778.39680496793 55.262 1 -1.0497172687299245 0.33052708638360173 1.0 ['nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 16750 19236 EETERKKEYIF True H1975_Epitope_Rep1 1470.7354589782597 1470.73436993586 80.152 2 -1.049742989799742 0.33052708638360173 1.0 ['ENST00000548731.1_1_12:56544665-56551697:-|nuORF'] 136257 20857 WRWRPFLKKWT True NCI_RA007_Epitope_Rep5 1602.8935718158598 1602.8924699358602 87.222 2 -1.0497536734459145 0.33052708638360173 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 42372 7699 IEAYQRLDR True H1975_Epitope_Rep1 1162.6094706195 1162.60836993586 34.576 2 -1.0498592796207 0.33058812763899237 1.0 ['ENSG00000130054|ENST00000252338|NALF2'] 61715 18079 LLAALTAPS True NCI_RA007_Epitope_Rep5 855.50656869075 855.50546993586 76.338 2 -1.0498820431267042 0.3305882352941176 1.0 ['ENST00000155926.8_1_2:12857684-12857711:+|nuORF'] 126804 9067 VLPRGATAA True PC9_epitope_Rep1 854.4974009893799 854.49630993586 39.728 2 -1.0498833077721454 0.3305882352941176 1.0 ['ENSG00000179918|ENST00000478753|SEPHS2'] 116501 8282 TTRAEALTEP True H1975_Epitope_Rep2 1087.55095268387 1087.54984993586 36.807 2 -1.0498978856739256 0.3305882352941176 1.0 ['ENSG00000091317|ENST00000205636|CMTM6'] 2406 8027 AEQFAIAE True NCI_RA007_Epitope_Rep2 877.4181476091699 877.4175949679301 35.855 1 -1.0500247571822297 0.33063620083397605 1.0 ['ENST00000487702.1_1_3:184059912-184060866:+|nuORF', 'nc|ENSG00000175182|Q6UXB0-2|FAM131A', 'nc|ENSG00000175182|Q6UXB0-1|FAM131A', 'ENSG00000175182|ENST00000383847|FAM131A'] 86196 6686 QIGLTRESVTI True H1975_Epitope_Rep1 1215.68230120659 1215.6812099358601 30.767 2 -1.050055336109202 0.3306363065983478 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'nc|ENSG00000115825|O94806-2|PRKD3', 'ENST00000494667.5_1_2:37496701-37543667:-|nuORF', 'ENST00000464552.1_1_2:37520270-37543499:-|nuORF'] 83820 18687 PVLPAHLL True PC9_epitope_Rep1 858.53272386894 858.53162993586 76.67 2 -1.050068678611832 0.3306363065983478 1.0 ['ENST00000442440.1_1_20:23337408-23337708:-|nuORF'] 15344 7201 EAGEQKPPSL True PC9_epitope_Rep5 1054.5294889632999 1054.52838993586 32.664 2 -1.0500816058489584 0.3306363065983478 1.0 ['ENST00000263401.9_1_11:36295935-36296034:-|nuORF'] 61025 7307 LIETYFVSP True PC9_epitope_Rep1 1067.55391280599 1067.55280993586 32.919 2 -1.050118154762062 0.33065812691980917 1.0 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 111945 12601 TIQDLFPKVMK True NCI_RA007_Epitope_Rep1 1318.7318942513 1318.73078993586 52.998 2 -1.050302343101541 0.33070608841136645 1.0 ['SLC6A14|p.L565Ffs*2|1|0.13|ENSG00000268104|chrX:116457685-116457686|-/TT|frameshift_variant', 'ENSG00000268104|ENST00000598581|SLC6A14'] 68466 14450 LTFFHFFFFFK True H1975_Epitope_Rep3 1526.7750793926195 1526.77398993586 60.939 2 -1.0503198056614553 0.33071051393318346 1.0 ['ENST00000226230.7_1_17:26653793-26654375:+|nuORF'] 123242 18173 VGLGTGLAAP True PC9_epitope_Rep3 854.48616759934 854.48506993586 75.106 2 -1.0503351844466857 0.33071051393318346 1.0 ['ENST00000492581.5_1_22:21067427-21075805:-|nuORF', 'ENST00000486209.5_1_22:21832732-21838406:-|nuORF'] 142394 4061 YYERNELYREK True NCI_RA007_Epitope_Rep2 1561.7525060247297 1561.7508749037902 20.436 3 -1.0503483853704978 0.3307149392236309 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 22707 9498 ETRVWEGP True PC9_epitope_Rep3 972.4664947839198 972.46538993586 41.483 2 -1.0503628102533615 0.3307149392236309 1.0 ['ENST00000397292.7_1_9:26947272-26947455:-|nuORF'] 46771 10738 ITFIWEHLFYW True H1975_Epitope_Rep3 1553.7707222881697 1553.7696299358602 46.382 2 -1.0504027487794643 0.33072368679013475 1.0 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'GRIN2A|p.F1234Sfs*51|1|0.28|ENSG00000183454|chr16:9763845-9763845|G/-|frameshift_variant', 'ENSG00000183454|ENST00000330684|GRIN2A'] 17822 19666 EHTDTSLIPP True PC9_epitope_Rep1 1108.540053647 1108.53894993586 80.469 2 -1.0504397945261301 0.33074550397323293 1.0 ['WNT2B|p.M338Efs*92|1|0.45|ENSG00000134245|chr1:112520344-112520356|CATGTGCTGTGGC/-|frameshift_variant'] 99946 18898 SINPVTLRRW True PC9_epitope_Rep2 1240.7040397106798 1240.70294993586 78.055 2 -1.050472084361124 0.3307673205860442 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A', 'PDE9A|p.F442Lfs*9|1|0.29|ENSG00000160191|chr21:42765461-42765461|T/-|frameshift_variant'] 120330 10750 VEECRTEL True NCI_RA007_Epitope_Rep3 977.4487961144499 977.44768993586 49.331 2 -1.0505632550296435 0.33081527563583135 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.W1342Lfs*5|1|0.44|ENSG00000131018|chr6:152441254-152441255|-/A|frameshift_variant'] 60378 17030 LGTGKQSTP True PC9_epitope_Rep1 887.47124581119 887.47014993586 70.33 2 -1.0506550923105822 0.3308196978409744 1.0 ['ENST00000513060.5_1_5:180669021-180669117:-|nuORF'] 64079 8022 LPCMSQKSY True H1975_Epitope_Rep2 1055.47798806775 1055.47688993586 35.804 2 -1.0506660756736999 0.3308196978409744 1.0 ['ENST00000486209.5_1_22:21830876-21832684:-|nuORF'] 53479 20906 KRHPPQRLQKL True NCI_RA007_Epitope_Rep2 1399.8524352798697 1399.8513299358601 86.473 2 -1.0507693375611653 0.33086765032607135 1.0 ['ENSG00000100557|ENST00000216445|CCDC198'] 11585 10114 DGDVIGPLP True H1975_Epitope_Rep3 881.44944773745 881.44834993586 43.944 2 -1.0507895514605772 0.3308720709889047 1.0 ['ENSG00000154781|ENST00000383794|CCDC174', 'CCDC174|p.T436Nfs*23|1|0.73|ENSG00000154781|chr3:14671095-14671096|-/A|frameshift_variant', 'CCDC174|p.D443Rfs*16|1|0.12|ENSG00000154781|chr3:14671111-14671112|-/C|frameshift_variant'] 68316 19088 LTELEKAT True PC9_epitope_Rep3 903.49131254943 903.49020993586 78.646 2 -1.0507914735182895 0.3308720709889047 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'FARP2|p.C654Lfs*26|1|0.39|ENSG00000006607|chr2:241468207-241468207|G/-|frameshift_variant'] 69424 11949 LTYESISSTAI True PC9_epitope_Rep2 1183.59723416995 1183.59559490379 51.284 3 -1.0508485183751444 0.3309069524307371 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 140223 10283 YQVSNKCWPI True PC9_epitope_Rep5 1236.59612905448 1236.59449490379 44.541 3 -1.0508913261057202 0.33091569634479423 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|226|3|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|39', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|39', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|39', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|39', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|0|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|39', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|39'] 1586 8403 AEEYGPSPGE True H1975_Epitope_Rep2 1034.4192698079798 1034.41816993586 37.275 2 -1.0509288511601704 0.33092444003031807 1.0 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-3|DQX1', 'ENST00000473508.1_1_2:74750418-74753390:-|nuORF'] 20173 8428 ENFLQKAPVP True H1975_Epitope_Rep3 1141.6131590176099 1141.61206993586 37.402 2 -1.0509891636917181 0.330959319420305 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 127329 11294 VMKKPICGVP True H1975_Epitope_Rep3 1070.5980436307798 1070.59694993586 48.548 2 -1.0510038915757132 0.33098113010297425 1.0 ['MMP13|p.R95I|1|0.23|ENSG00000137745|chr11:102955330-102955330|C/A|missense_variant'] 14673 9332 DVGRRRKH True H1975_Epitope_Rep3 1022.5845932843399 1022.5840749679301 40.892 1 -1.0510241720960876 0.33099861484985493 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 44202 6093 IKDDSEDLKP True PC9_epitope_Rep2 1158.57683307854 1158.5757299358602 28.828 2 -1.0510258491470506 0.33099861484985493 1.0 ['ENST00000503672.1_1_1:2077474-2087532:+|nuORF', 'nc|ENSG00000067606|Q05513-2|PRKCZ', 'ENST00000479263.5_1_1:2075906-2116445:+|nuORF', 'nc|ENSG00000067606|Q05513-3|PRKCZ', 'ENSG00000067606|ENST00000378567|PRKCZ'] 67741 7855 LSYFSFWWWWW True NCI_RA007_Epitope_Rep1 1692.7554065771997 1692.7543099358602 34.545 2 -1.0510866115936446 0.3310073568805781 1.0 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 79935 9427 PERQLSVP True PC9_epitope_Rep1 924.5028802926399 924.50178993586 41.119 2 -1.0511140209661278 0.3310205148307853 1.0 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 21871 4839 ESDFLPVSSAK True H1975_Epitope_Rep3 1178.5819184589798 1178.58028490379 23.74 3 -1.0511193168009634 0.3310205148307853 1.0 ['ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000152217|Q9Y6X0-2|SETBP1', 'SETBP1|p.P313Afs*27|1|0.14|ENSG00000152217|chr18:44950274-44950275|-/A|frameshift_variant', 'SETBP1|p.F260Lfs*83|1|0.2|ENSG00000152217|chr18:44950116-44950116|C/-|frameshift_variant', 'SETBP1|p.A438Lfs*6|1|0.4|ENSG00000152217|chr18:44950651-44950651|G/-|frameshift_variant', 'SETBP1|p.R750Gfs*34|1|0.29|ENSG00000152217|chr18:44951584-44951584|C/-|frameshift_variant', 'SETBP1|p.K711Nfs*73|1|0.19|ENSG00000152217|chr18:44951473-44951473|G/-|frameshift_variant', 'SETBP1|p.H971Tfs*43|1|0.33|ENSG00000152217|chr18:44952249-44952249|C/-|frameshift_variant'] 115918 8519 TSFSSRFGQG True PC9_epitope_Rep5 1072.49377216092 1072.49266993586 37.71 2 -1.0511574444357483 0.3310205148307853 1.0 ['ENST00000564709.5_1_16:1827100-1828401:-|nuORF', 'ENSG00000162032|ENST00000566339|SPSB3', 'ENST00000569380.5_1_16:1827100-1828231:-|nuORF'] 68868 6641 LTMVCRPA True PC9_epitope_Rep3 889.4513793970899 889.45028993586 30.568 2 -1.0511973473412146 0.3310423227188982 1.0 ['ENST00000451956.1_1_3:50290513-50293631:+|nuORF'] 67096 9492 LSQGIVCFVP True H1975_Epitope_Rep1 1061.55795264061 1061.55684993586 41.43 2 -1.0512143270936072 0.331042412522539 1.0 ['ENST00000523752.5_1_8:22878538-22878592:-|nuORF'] 46765 11339 ITEYQCHQY True PC9_epitope_Rep5 1183.49680893603 1183.49570993586 48.612 2 -1.0512291949709844 0.331042412522539 1.0 ['ENSG00000090863|ENST00000422840|GLG1', 'nc|ENSG00000090863|Q92896-3|GLG1', 'nc|ENSG00000090863|Q92896-2|GLG1'] 11410 16443 DETLAKQTL True PC9_epitope_Rep6 1017.53423999057 1017.53314993586 75.658 2 -1.0512486133758643 0.331042412522539 1.0 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENST00000525792.5_1_11:47746320-47755666:-|nuORF'] 121302 10986 VETQIYRP True NCI_RA007_Epitope_Rep5 1004.5290950404799 1004.52798993586 48.894 2 -1.0513488289707258 0.33105556789526636 1.0 ['ENST00000429864.1_1_X:127575186-127575687:+|nuORF'] 85315 5207 QERMFTIDP True H1975_Epitope_Rep3 1135.5331944447498 1135.53208993586 25.12 2 -1.0513579425507575 0.33105556789526636 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'MAP2|p.E1172*|1|0.31|ENSG00000078018|chr2:209695683-209695684|-/T|frameshift_variant', 'MAP2|p.I1173Yfs*12|1|0.41|ENSG00000078018|chr2:209695685-209695685|A/-|frameshift_variant'] 93126 25447 RPPGGGGG True H1975_Epitope_Rep1 653.32452200785 653.3239749679301 105.43 1 -1.0513644265910917 0.33105556789526636 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 62017 6703 LLDQHMLKVHY True H1975_Epitope_Rep1 1395.73329123363 1395.73218993586 30.829 2 -1.0514095000096333 0.33107737333089443 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A'] 28815 15483 FSVTKNKI True PC9_epitope_Rep2 935.54401682863 935.54290993586 64.831 2 -1.0514306529661233 0.3311123304852238 1.0 ['ENSG00000153721|ENST00000607772|CNKSR3', 'nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3'] 24143 17998 EYQCQNLYQL True PC9_epitope_Rep5 1300.57578753272 1300.57468993586 74.247 2 -1.0514314664985007 0.3311123304852238 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'nc|ENSG00000080910|P36980-2|CFHR2', 'ENSG00000080910|ENST00000367415|CFHR2', 'ENSG00000244414|ENST00000320493|CFHR1'] 45009 9885 IPDVLRPVP True H1975_Epitope_Rep3 1004.6018660579199 1004.60076993586 43.054 2 -1.0514363039691927 0.3311123304852238 1.0 ['nc|ENSG00000087903|P48378-2|RFX2', 'ENSG00000087903|ENST00000303657|RFX2'] 111699 11814 TIFNRVDI True PC9_epitope_Rep6 976.5341804209198 976.53308993586 56.638 2 -1.0514415285636343 0.3311123304852238 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 141234 5313 YTDAHGDLL True H1975_Epitope_Rep1 1003.46107505031 1003.45996993586 25.498 2 -1.0514625883436743 0.33111241753217063 1.0 ['ENSG00000102981|ENST00000458121|PARD6A', 'nc|ENSG00000102981|Q9NPB6|PARD6A'] 102054 4680 SLQWRHRWDTP True PC9_epitope_Rep3 1480.7323797168397 1480.73074490379 23.094 3 -1.0514743541830667 0.33111241753217063 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 101328 18673 SLIRAPRNL True PC9_epitope_Rep4 1038.62981214126 1038.6287099358601 79.906 2 -1.0514749289313885 0.33111241753217063 1.0 ['ENSG00000124302|ENST00000650847|CHST8'] 87534 22546 QQITGHGG True H1975_Epitope_Rep1 796.38276515996 796.38166993586 93.777 2 -1.0515771005192809 0.3312126041857184 1.0 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 42099 19161 IDLIVVVASMV True H1975_Epitope_Rep2 1157.67298239285 1157.67188993586 79.53 2 -1.0516307456939065 0.3312344050060747 1.0 ['ENSG00000053918|ENST00000155840|KCNQ1', 'nc|ENSG00000053918|P51787-2|KCNQ1'] 112757 9749 TLHLPTTPCN True NCI_RA007_Epitope_Rep2 1095.53827982519 1095.5371899358602 42.542 2 -1.0516768811605066 0.3312606139777923 1.0 ['nc|ENSG00000003987|Q9Y216-2|MTMR7', 'ENSG00000003987|ENST00000180173|MTMR7'] 39669 5538 HLQPSEPA True PC9_epitope_Rep3 877.4293809992099 877.42828993586 26.383 2 -1.0516864888940902 0.3312606139777923 1.0 ['ENST00000579315.5_1_17:16852257-16855884:-|nuORF'] 86955 20853 QLVRHRLFRE True H1975_Epitope_Rep3 1352.7789359864398 1352.7772949037899 87.1 3 -1.051688006524047 0.3312606139777923 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 102805 1344 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 7.5158 2 -1.0517621293661419 0.3312650224683875 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 18402 14640 EIVHFTLPD True PC9_epitope_Rep1 1069.54441075145 1069.5433099358602 61.135 2 -1.051771912096281 0.3312650224683875 1.0 ['ENSG00000116039|ENST00000234396|ATP6V1B1'] 133256 24054 VVTLLSNY True PC9_epitope_Rep2 907.50148331031 907.50038993586 98.026 2 -1.051786116758279 0.33127375804997844 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 18926 10379 ELEEQNPNVQD True H1975_Epitope_Rep3 1313.57353860325 1313.57244993586 44.979 2 -1.0517918229970955 0.33128249340334925 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF'] 99558 9130 SIEEVYYLW True NCI_RA007_Epitope_Rep5 1200.5702911461199 1200.56918993586 41.769 2 -1.0518337636079098 0.3312912285285089 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 66446 12670 LSGQNAQMPV True PC9_epitope_Rep2 1043.50697969691 1043.50588993586 54.042 2 -1.0518572608775238 0.3312913085503801 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 84844 8429 QEALGVASWKR True NCI_RA007_Epitope_Rep2 1243.66731984879 1243.6662299358602 37.429 2 -1.0518633127496895 0.3312913085503801 1.0 ['ENST00000260599.10_3_2:27309825-27310158:+|nuORF'] 43252 20228 IFNSELEFAQI True H1975_Epitope_Rep1 1309.65541775241 1309.65432993586 84.155 2 -1.051896018814742 0.3312913085503801 1.0 ['nc|ENSG00000168675|O15165-2|LDLRAD4', 'ENSG00000168675|ENST00000359446|LDLRAD4'] 116084 9831 TSQSVPAM True NCI_RA007_Epitope_Rep3 819.3796539254699 819.37854993586 45.744 2 -1.0520393743136243 0.3313914758552228 1.0 ['GLDN|p.L517P|1|0.09|ENSG00000186417|chr15:51404648-51404648|T/C|missense_variant'] 128320 18902 VPPPRFRPRYR True NCI_RA007_Epitope_Rep2 1439.8262205320298 1439.82512993586 78.356 2 -1.0520622389009824 0.33141327063740855 1.0 ['ENSG00000006047|ENST00000007699|YBX2'] 105872 6761 SSPESALTH True NCI_RA007_Epitope_Rep1 927.42977492203 927.42866993586 30.307 2 -1.052102982950339 0.3314176745644053 1.0 ['ENSG00000180532|ENST00000318203|ZSCAN4'] 136787 14143 WYVYRYLLSEK True H1975_Epitope_Rep3 1518.7871006282996 1518.7860099358602 59.733 2 -1.0521237794514644 0.3314176745644053 1.0 ['SLC17A9|p.L348Pfs*42|1|0.29|ENSG00000101194|chr20:62965707-62965707|T/-|frameshift_variant', 'nc|ENSG00000101194|Q9BYT1-2|SLC17A9', 'ENSG00000101194|ENST00000370351|SLC17A9', 'nc|ENSG00000101194|Q9BYT1-3|SLC17A9', 'ENST00000488738.5_1_20:61584086-61594126:+|nuORF'] 30684 5658 GALDGEPRPGP True NCI_RA007_Epitope_Rep5 1064.5250722892 1064.5239699358601 28.452 2 -1.0522024349203931 0.33152223600862013 1.0 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF'] 69107 7163 LTRGPGAF True PC9_epitope_Rep2 817.4446371405298 817.44354993586 32.945 2 -1.0522057649404486 0.33152223600862013 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 70272 13061 LVRNKKVGV True PC9_epitope_Rep1 1011.6552986131098 1011.65420993586 55.107 2 -1.0522383444536612 0.33152223600862013 1.0 ['ENST00000572418.1_1_17:3807220-3819678:-|nuORF', 'ENSG00000108405|ENST00000225538|P2RX1'] 79595 5458 PDKAPAGP True NCI_RA007_Epitope_Rep5 751.3864535580699 751.38534993586 27.682 2 -1.05227535339889 0.3315440273750751 1.0 ['ENST00000572919.1_3_17:3512819-3513218:-|nuORF'] 129774 23233 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 102.47 3 -1.0522927153596455 0.33156581817231967 1.0 ['DENND2A|p.R502S|1|0.82|ENSG00000146966|chr7:140569679-140569679|C/G|missense_variant', 'nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 66636 23458 LSKKRRET True NCI_RA007_Epitope_Rep3 1016.60907669668 1016.60796993586 101.81 2 -1.0522999325709907 0.33157454811409465 1.0 ['ENST00000389561.6_1_12:132528244-132528731:+|nuORF'] 37379 11004 GVSLRSLYK True PC9_epitope_Rep2 1021.5920296502101 1021.59092993586 47.648 2 -1.0523252856974805 0.3315746859247264 1.0 ['nc|ENSG00000142185|O94759-2|TRPM2', 'ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-3|TRPM2'] 68901 10544 LTNMPRHSLY True H1975_Epitope_Rep1 1230.6179271282201 1230.61682993586 45.512 2 -1.0523255271679606 0.3315746859247264 1.0 ['DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER', 'DNER|p.S630R|1|0.33|ENSG00000187957|chr2:229367085-229367085|G/T|missense_variant'] 47351 13192 IVGGLCFIPMK True NCI_RA007_Epitope_Rep2 1176.63990844276 1176.63880993586 55.947 2 -1.0523437059794944 0.3315746859247264 1.0 ['ENST00000300584.7_1_15:78322423-78337251:-|nuORF'] 136824 11710 YAATIASKL True NCI_RA007_Epitope_Rep4 936.5280324113199 936.52692993586 52.011 2 -1.0523510860569687 0.3315746859247264 1.0 ['ENSG00000102554|ENST00000377687|KLF5', 'nc|ENSG00000102554|Q13887-4|KLF5', 'nc|ENSG00000102554|Q13887-2|KLF5'] 45910 9822 ISEARQNTL True PC9_epitope_Rep3 1030.54072235334 1030.5396299358601 42.74 2 -1.052361744485218 0.3315746859247264 1.0 ['ENSG00000137502|ENST00000527633|RAB30'] 89802 24459 RALLGKFINVI True PC9_epitope_Rep4 1242.78122740222 1242.77959490379 102.57 3 -1.0523631093137114 0.3315746859247264 1.0 ['ENSG00000133069|ENST00000358024|TMCC2', 'nc|ENSG00000133069|O75069-3|TMCC2', 'nc|ENSG00000133069|O75069-5|TMCC2', 'nc|ENSG00000133069|O75069-2|TMCC2'] 42538 11144 IEERDAAL True PC9_epitope_Rep6 915.4661604307498 915.46506993586 53.817 2 -1.0524198140973133 0.3315834149526608 1.0 ['ENST00000556940.1_1_14:37777682-37838859:+|nuORF', 'ENST00000553349.1_1_14:37754581-37892775:+|nuORF', 'nc|ENSG00000151338|Q8TD10-2|MIPOL1', 'ENST00000554930.5_1_14:37667225-37854725:+|nuORF', 'ENSG00000151338|ENST00000684589|MIPOL1'] 86740 18012 QLLEIFNSGI True PC9_epitope_Rep6 1132.61282466444 1132.61172993586 81.91 2 -1.0526051091764745 0.3317096740493105 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 130393 8839 VSLHKQEL True PC9_epitope_Rep6 952.53418042092 952.53308993586 43.931 2 -1.0526835906864 0.33174470529861855 1.0 ['ENST00000519685.5_1_8:22865572-22868139:+|nuORF'] 121053 9067 VEQQLGLEIQK True NCI_RA007_Epitope_Rep2 1283.7085159544297 1283.7074099358601 39.872 2 -1.0526934883087462 0.33174470529861855 1.0 ['ENST00000497232.5_1_2:74702580-74708169:-|nuORF', 'nc|ENSG00000135637|Q17RM4-3|CCDC142', 'nc|ENSG00000135637|Q17RM4-2|CCDC142', 'ENSG00000135637|ENST00000393965|CCDC142'] 107438 8405 SVLRSDSSP True H1975_Epitope_Rep3 946.47197408718 946.47086993586 37.314 2 -1.0527715477665491 0.33174470529861855 1.0 ['ENSG00000278803|ENST00000458091|PWWP4'] 68917 9148 LTNTNRALAL True PC9_epitope_Rep4 1085.61930702721 1085.61820993586 42.779 2 -1.0527806052368933 0.33174470529861855 1.0 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF'] 62446 7331 LLHQTQSAL True PC9_epitope_Rep3 1009.55564414149 1009.55454993586 33.208 2 -1.052783999926464 0.33174470529861855 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2', 'SBF2|p.E591Nfs*13|1|0.07|ENSG00000133812|chr11:9962046-9962046|C/-|frameshift_variant'] 888 7786 ADIWTLERTHR True NCI_RA007_Epitope_Rep2 1396.7211463268 1396.72004993586 34.914 2 -1.0527865043565403 0.33174470529861855 1.0 ['nc|ENSG00000177669|Q96T53-2|MBOAT4', 'ENSG00000177669|ENST00000320542|MBOAT4'] 91859 3472 RKKLILAK True PC9_epitope_Rep4 968.6858704653998 968.68476993586 19.427 2 -1.0527868036807289 0.33174470529861855 1.0 ['ENSG00000257315|ENST00000550078|ZBED6'] 32307 14474 GFDAGDCG True NCI_RA007_Epitope_Rep5 740.24355437548 740.24300496793 62.356 1 -1.0527904556543777 0.33174470529861855 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'ENST00000552009.1_1_12:102159833-102159905:-|nuORF'] 127847 14620 VPFPPPMP True H1975_Epitope_Rep2 880.4516966669199 880.45058993586 61.396 2 -1.0528053052200037 0.33174470529861855 1.0 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 132871 10862 VVLNLDTT True NCI_RA007_Epitope_Rep3 873.4807478657301 873.47964993586 49.786 2 -1.052825346602893 0.33174470529861855 1.0 ['nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6'] 20748 6444 EQEWDPQK True H1975_Epitope_Rep3 1058.4668887067398 1058.4657899358601 29.762 2 -1.0528544420744879 0.33175343073889824 1.0 ['CAPN6|p.R283Gfs*11|1|0.19|ENSG00000077274|chrX:111251586-111251596|AGGGGTTTCTC/-|frameshift_variant', 'ENSG00000077274|ENST00000324068|CAPN6', 'CAPN6|p.K105T|1|0.44|ENSG00000077274|chrX:111253200-111253200|T/G|missense_variant'] 21997 7809 ESGQPVVP True PC9_epitope_Rep3 811.4075829254699 811.40648993586 35.029 2 -1.0528825663178811 0.33176215595132397 1.0 ['ENSG00000133393|ENST00000255759|CEP20'] 133302 25065 VVTVGVITVL True NCI_RA007_Epitope_Rep5 998.6375828603 998.63703496793 103.92 1 -1.0529179478683077 0.33176654915785353 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 63898 15888 LNPLVRQL True PC9_epitope_Rep5 951.5865503469499 951.5860049679301 66.103 1 -1.0529365999122897 0.33176654915785353 1.0 ['ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2'] 45033 16865 IPFYWWLDMWR True H1975_Epitope_Rep1 1611.7696767423497 1611.7685699358601 70.281 2 -1.0530134252268095 0.3317752738572417 1.0 ['ENSG00000257008|ENST00000582579|GPR142', 'nc|ENSG00000257008|Q7Z601|GPR142'] 56165 19604 LAVSIRNLL True PC9_epitope_Rep3 997.62841515893 997.62730993586 80.644 2 -1.0530661024890977 0.3318145024414445 1.0 ['ENST00000477312.1_1_3:196863310-196867015:-|nuORF'] 32318 19411 GFEEVQSHAF True PC9_epitope_Rep5 1149.50908787189 1149.50798993586 79.713 2 -1.053071730037213 0.3318145024414445 1.0 ['ENSG00000138039|ENST00000294954|LHCGR', 'nc|ENSG00000138039|P22888-2|LHCGR', 'LHCGR|p.N195H|1|0.11|ENSG00000138039|chr2:48714008-48714008|T/G|missense_variant'] 36202 14688 GVCGRFLSSTV True PC9_epitope_Rep4 1124.5648289261999 1124.56372993586 64.432 2 -1.0530829004862394 0.3318145024414445 1.0 ['TREML1|p.R203T|1|0.38|ENSG00000161911|chr6:41150274-41150274|C/G|missense_variant'] 99635 15900 SIFRDFPL True PC9_epitope_Rep2 993.5283667644899 993.52726993586 66.413 2 -1.053107955634605 0.33183628174162805 1.0 ['ENST00000403263.5_1_2:206950812-206950881:-|nuORF'] 74355 5322 NEQLEEIEK True NCI_RA007_Epitope_Rep1 1130.54553295026 1130.54442993586 24.779 2 -1.0531861730106034 0.3318972270092433 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'SYNE2|p.S2517Tfs*20|1|0.1|ENSG00000054654|chr14:64049783-64049783|G/-|frameshift_variant'] 72757 5634 MNREDMSLP True H1975_Epitope_Rep2 1091.47396531647 1091.4728699358602 26.671 2 -1.0532785498270092 0.331971226027129 1.0 ['ENST00000251047.5_1_18:57006041-57006074:-|nuORF'] 56765 22713 LDLRRPMRTVP True PC9_epitope_Rep5 1352.7710737246798 1352.7699699358602 92.37 2 -1.053383245640892 0.3320017232600948 1.0 ['DMRTB1|p.P297Rfs*13|1|0.17|ENSG00000143006|chr1:53464771-53464771|C/-|frameshift_variant', 'ENSG00000143006|ENST00000371445|DMRTB1'] 136530 15507 WWDIYYTLFEK True NCI_RA007_Epitope_Rep1 1562.7445671099797 1562.74397496793 64.403 1 -1.0533982542334037 0.3320017232600948 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 109673 6958 TEASSSAFR True H1975_Epitope_Rep3 954.4406739588999 954.43956993586 31.725 2 -1.053439450903566 0.33203655352480416 1.0 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 110925 9719 TGWLCLHS True PC9_epitope_Rep3 915.4272728242299 915.42616993586 42.337 2 -1.053461267504622 0.33204527356039737 1.0 ['ENSG00000173208|ENST00000308666|ABCD2'] 123154 16325 VGKRSNRV True NCI_RA007_Epitope_Rep5 914.5409971368599 914.5404449679301 69.55 1 -1.0535160281291573 0.33206704785775826 1.0 ['nc|ENSG00000121680|Q9Y5Y5-2|PEX16', 'ENSG00000121680|ENST00000378750|PEX16', 'ENST00000532554.5_1_11:45935680-45939362:-|nuORF'] 68710 16700 LTKQCVLI True PC9_epitope_Rep4 916.5415743004799 916.54046993586 72.209 2 -1.0535740946164618 0.33208882158662195 1.0 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 33459 18957 GLARHWSIHT True H1975_Epitope_Rep1 1176.6152247062798 1176.61412993586 79.042 2 -1.053707044168798 0.3321454213171464 1.0 ['nc|ENSG00000197608|Q6ZN19-2|ZNF841', 'nc|ENSG00000197608|Q6ZN19|ZNF841', 'ENSG00000197608|ENST00000594440|ZNF841'] 36566 13749 GVHAVMYSYY True NCI_RA007_Epitope_Rep4 1188.52738078832 1188.5262899358602 60.112 2 -1.053721938887611 0.3321454213171464 1.0 ['ELOVL6|p.Q230Rfs*29|1|0.33|ENSG00000170522|chr4:110051449-110051449|A/-|frameshift_variant', 'ENSG00000170522|ENST00000302274|ELOVL6'] 119191 8527 VAKKIRERKEK True NCI_RA007_Epitope_Rep4 1383.8674166376697 1383.86630993586 39.591 2 -1.0537895438248586 0.3321802469780435 1.0 ['ENSG00000197077|ENST00000358431|KIAA1671'] 8713 12764 AVAQFKKY True PC9_epitope_Rep6 953.5334521449299 953.53234993586 60.59 2 -1.053809270230599 0.3321889644549454 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 139227 21897 YLFYNFEYWFL True NCI_RA007_Epitope_Rep1 1603.7387534535499 1603.7376499358602 89.661 2 -1.053847626895225 0.33219768170426067 1.0 ['ENSG00000102805|ENST00000377453|CLN5'] 37018 21986 GVPARRGQ True PC9_epitope_Rep6 839.4725832238698 839.4720349679301 97.49 1 -1.0538939906294365 0.3322281686463908 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'nc|ENSG00000075702|O43379-3|WDR62', 'ENST00000378860.8_1_19:36545867-36564559:+|nuORF', 'nc|ENSG00000075702|O43379-2|WDR62', 'ENST00000608676.1_1_19:36545867-36550933:+|nuORF'] 133259 23326 VVTLLSNY True PC9_epitope_Rep4 907.50148331031 907.50038993586 97.983 2 -1.0539001817415836 0.3322281686463908 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 112031 15180 TISGEPALLP True H1975_Epitope_Rep3 996.5491617787198 996.54861496793 63.792 1 -1.0539522765062301 0.3322500228408839 1.0 ['nc|ENSG00000165802|Q6X4W1-4|NSMF', 'nc|ENSG00000165802|Q6X4W1-6|NSMF', 'nc|ENSG00000165802|Q6X4W1-3|NSMF', 'nc|ENSG00000165802|Q6X4W1-2|NSMF', 'ENSG00000165802|ENST00000371475|NSMF', 'nc|ENSG00000165802|Q6X4W1-5|NSMF'] 131835 7313 VTQRLLPP True H1975_Epitope_Rep3 922.5600012459398 922.55890993586 33.102 2 -1.0539526446411416 0.3322500228408839 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000552500.1_1_14:31841014-31844139:-|nuORF', 'ENST00000549185.5_3_14:31803609-31872202:-|nuORF'] 20714 8193 EQELLQPGILG True H1975_Epitope_Rep1 1195.6448530687098 1195.6437499358601 36.455 2 -1.053992290894767 0.3322500228408839 1.0 ['ENSG00000141506|ENST00000447110|PIK3R5', 'ENST00000578515.5_1_17:8785060-8814811:-|nuORF'] 46718 14021 ITEAQRTSL True PC9_epitope_Rep1 1017.5454733806099 1017.54436993586 58.771 2 -1.0540228552139408 0.3322500228408839 1.0 ['ENST00000520810.5_1_8:42188602-42189049:+|nuORF'] 38613 27635 HFDWLYKRLLV True PC9_epitope_Rep3 1488.8241548433598 1488.8230499358601 114.18 2 -1.054023643333421 0.3322500228408839 1.0 ['SNX9|p.E295K|1|0.11|ENSG00000130340|chr6:157909959-157909959|G/A|missense_variant'] 102802 1104 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 6.1715 2 -1.054030487474482 0.3322500228408839 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 71886 12632 MENLQQDYELK True NCI_RA007_Epitope_Rep4 1409.64968074897 1409.6485899358602 55.62 2 -1.0540453254378999 0.3322500228408839 1.0 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 68473 13689 LTFKKSKDM True NCI_RA007_Epitope_Rep3 1096.5950664253198 1096.59396993586 61.158 2 -1.0541109230638035 0.33228484168211125 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 36746 15196 GVKGGCRA True H1975_Epitope_Rep3 746.3857423654199 746.38519496793 63.855 1 -1.054154990042319 0.33229793398676605 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1', 'ENST00000565863.1_1_16:84109176-84124517:-|nuORF'] 78240 18951 NYGQYFTLW True NCI_RA007_Epitope_Rep3 1190.53965972418 1190.53907496793 82.828 1 -1.0541748169247758 0.33229793398676605 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 137127 18434 YASSRREAY True PC9_epitope_Rep1 1101.52032126193 1101.51922993586 75.697 2 -1.0542115023314849 0.33229793398676605 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 45666 23698 IRIILLYIFLK True H1975_Epitope_Rep3 1403.9268290067496 1403.92519490379 98.835 3 -1.0542188880152084 0.33230664822113753 1.0 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 36868 13402 GVLLHLQSV True PC9_epitope_Rep4 964.5705659296401 964.56946993586 59.452 2 -1.054249198299185 0.33232841313965783 1.0 ['ENST00000511909.5_1_4:122053805-122071269:-|nuORF'] 35305 24148 GRLASKKLRFL True H1975_Epitope_Rep3 1287.8139245128298 1287.81226490379 100.61 3 -1.054390152707024 0.33237627897264566 1.0 ['ENST00000508198.5_1_4:152375928-152403748:+|nuORF'] 98112 6163 SESFRGFQQK True H1975_Epitope_Rep3 1212.58873517492 1212.5876299358601 28.718 2 -1.0544919994080562 0.33240675488737503 1.0 ['ENST00000311637.9_2_20:50215600-50215741:-|nuORF'] 94379 12019 RRRREHPSNV True PC9_epitope_Rep2 1305.7126473317699 1305.7110149037899 51.548 3 -1.0545349184181951 0.33240675488737503 1.0 ['ENST00000524267.5_1_8:124279594-124286056:-|nuORF'] 23405 12441 EVSNRFSGVP True PC9_epitope_Rep3 1090.5407223533398 1090.5396299358601 52.879 2 -1.0546251976046368 0.33244156759366805 1.0 ['nc|ENSG00000243264|A0A075B6S2|IGKV2D-29', 'nc|ENSG00000211623|A0A0A0MRZ7|IGKV2D-26'] 66956 13828 LSPDLSHTTL True PC9_epitope_Rep2 1082.56078909158 1082.5596899358602 58.474 2 -1.0546262496586967 0.33244594083179996 1.0 ['ENSG00000198734|ENST00000367797|F5'] 14465 19780 DTETLQKVFGR True PC9_epitope_Rep2 1292.6724647988797 1292.6713699358602 81.471 2 -1.0546380876217982 0.33244594083179996 1.0 ['ENSG00000137628|ENST00000393743|DDX60'] 11106 12972 DCYVDHVL True PC9_epitope_Rep2 962.4167677101799 962.41566993586 55.188 2 -1.0546622762483622 0.33245465222497717 1.0 ['ENST00000610272.1_1_1:179850989-179851172:-|nuORF'] 139210 11444 YLFEFHEDIEV True H1975_Epitope_Rep1 1439.66089705567 1439.65980993586 48.999 2 -1.0546938031728321 0.332489462489071 1.0 ['CDH10|p.V393F|1|0.37|ENSG00000040731|chr5:24509645-24509645|C/A|missense_variant'] 36872 23215 GVLLLWLRME True PC9_epitope_Rep3 1228.7002002001998 1228.69967496793 94.57 1 -1.0547864577242554 0.33253735238468063 1.0 ['AluSp_dup1142|chr1:32231212-32231509:+|1.2519690523843836|0.2089834518128584|2.58|540.0|22|3|anti-sense'] 113358 18054 TLRRYKRHYKL True NCI_RA007_Epitope_Rep1 1532.90519912872 1532.90410993586 74.365 2 -1.054804909753327 0.33253735238468063 1.0 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000520731.1_1_5:153832004-153835585:+|nuORF'] 100583 6936 SLCLHSGDQE True PC9_epitope_Rep2 1087.46042342731 1087.45932993586 32.08 2 -1.054806764515941 0.33253735238468063 1.0 ['ENSG00000204687|ENST00000377127|MAS1L'] 67451 10342 LSSRAEEPP True PC9_epitope_Rep1 984.4876241513199 984.48652993586 44.662 2 -1.0548142937807452 0.33253735238468063 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5'] 126531 6353 VLLLLLLLLLL True NCI_RA007_Epitope_Rep1 1247.9196183679899 1247.91852993586 28.739 2 -1.0548214808356715 0.3325504319006237 1.0 ['PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF'] 123381 23620 VGMKKLFKKE True PC9_epitope_Rep1 1206.71585026434 1206.71474993586 95.647 2 -1.0548350142389118 0.3325504319006237 1.0 ['nc|ENSG00000166153|Q8N2C3|DEPDC4', 'ENSG00000166153|ENST00000550587|DEPDC4'] 69004 16789 LTPSDPGEFCV True PC9_epitope_Rep5 1163.51687567427 1163.5157699358601 69.585 2 -1.054835481001655 0.3325504319006237 1.0 ['nc|ENSG00000140506|Q9HAT1-3|LMAN1L', 'ENSG00000140506|ENST00000309664|LMAN1L'] 72731 21124 MNKAHGCE True H1975_Epitope_Rep3 888.3582072882399 888.35710993586 88.233 2 -1.054949548899672 0.33255914090737093 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 81440 13374 PLFEEELAFW True PC9_epitope_Rep5 1279.6124903112698 1279.6108349037902 56.459 3 -1.054967151734419 0.3325635103926097 1.0 ['nc|ENSG00000166006|Q96PR1-4|KCNC2', 'nc|ENSG00000166006|Q96PR1-5|KCNC2', 'nc|ENSG00000166006|Q96PR1-3|KCNC2', 'nc|ENSG00000166006|Q96PR1-6|KCNC2', 'nc|ENSG00000166006|Q96PR1-2|KCNC2', 'ENSG00000166006|ENST00000549446|KCNC2', 'KCNC2|p.D173Rfs*80|1|0.2|ENSG00000166006|chr12:75207467-75207468|-/G|frameshift_variant'] 67899 11506 LTCHCPSE True PC9_epitope_Rep6 888.3469738982 888.34586993586 55.337 2 -1.0549787619001911 0.3325635103926097 1.0 ['GUCY2D|p.R313C|1|0.14|ENSG00000132518|chr17:8004067-8004067|C/T|missense_variant'] 141606 8359 YTRQERYRARP True NCI_RA007_Epitope_Rep2 1494.7803925384198 1494.77875490379 37.155 3 -1.0549991907532037 0.3325722188878161 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 48522 6238 KAKKEHER True PC9_epitope_Rep5 1024.5777765683997 1024.57666993586 28.974 2 -1.0550497699400299 0.3325939746617434 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 27732 24304 FPRPRPPAGPK True H1975_Epitope_Rep3 1218.69856040742 1218.69746993586 101.22 2 -1.0550712164677711 0.3326244373409877 1.0 ['ENST00000335142.5_1_14:56043911-56046785:-|nuORF', 'ENST00000554558.5_1_14:55966046-56046785:-|nuORF'] 81986 11972 PLTSDIVSE True H1975_Epitope_Rep2 959.48114178855 959.48004993586 51.13 2 -1.0550790041558544 0.3326244373409877 1.0 ['nc|ENSG00000067646|P08048-3|ZFY', 'ENSG00000067646|ENST00000155093|ZFY'] 119250 12209 VALHDNPLV True PC9_epitope_Rep4 976.5341804209199 976.53308993586 54.781 2 -1.0551238946569304 0.33263314458680165 1.0 ['LRIT2|p.W202L|1|0.26|ENSG00000204033|chr10:84224620-84224620|C/A|missense_variant'] 96808 8116 SAQTHFAA True PC9_epitope_Rep2 831.3875161872298 831.38640993586 36.576 2 -1.055169807582234 0.3326418516054118 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 84616 5574 QDDVVLHVSS True PC9_epitope_Rep3 1097.53530261973 1097.5342099358602 26.518 2 -1.055175349338602 0.3326418786692759 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant', 'NAV3|p.R1152Efs*27|1|0.47|ENSG00000067798|chr12:78119649-78119649|C/-|frameshift_variant'] 135516 24147 WKFRAMRKI True PC9_epitope_Rep2 1234.7121022965798 1234.7110099358601 98.407 2 -1.0551820604932456 0.3326418786692759 1.0 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 72467 16772 MKVWLLLG True NCI_RA007_Epitope_Rep5 958.5673951254998 958.56628993586 71.27 2 -1.0551901013500422 0.3326418786692759 1.0 ['ENSG00000104213|ENST00000251630|PDGFRL'] 80552 8437 PGPLSKQGS True PC9_epitope_Rep5 869.46068112749 869.46013496793 37.396 1 -1.055371851839169 0.33267667740799206 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 72556 22570 MLLSKQFV True PC9_epitope_Rep2 964.5415743004801 964.54046993586 92.309 2 -1.0554573981065114 0.33271147523874134 1.0 ['ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3', 'ENSG00000137100|ENST00000259632|DCTN3'] 55665 6486 LALAWQEP True NCI_RA007_Epitope_Rep2 926.4861675993399 926.48506993586 29.838 2 -1.0554656081708746 0.3327158400083492 1.0 ['ENST00000278823.6_1_11:62369120-62369234:-|nuORF'] 21040 17707 EQTHKLELQ True PC9_epitope_Rep5 1124.5825871653199 1124.5814899358602 73.127 2 -1.055484129994465 0.3327158400083492 1.0 ['nc|ENSG00000175471|Q6DN14-4|MCTP1', 'nc|ENSG00000175471|Q6DN14-2|MCTP1', 'ENSG00000175471|ENST00000515393|MCTP1', 'nc|ENSG00000175471|Q6DN14-5|MCTP1', 'nc|ENSG00000175471|Q6DN14-3|MCTP1'] 45393 8548 IQEHNEYYQYL True H1975_Epitope_Rep2 1498.6728587217 1498.67176993586 37.835 2 -1.0555082277497463 0.3327158641741785 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 13423 5200 DMEQYMEDQYW True H1975_Epitope_Rep3 1536.5537317588 1536.55207490379 25.092 3 -1.0555330115535921 0.3327158641741785 1.0 ['ENST00000557927.1_1_15:89172339-89173522:+|nuORF', 'ENSG00000181026|ENST00000332810|AEN'] 242 19237 AAGAPNLVLAA True PC9_epitope_Rep2 966.5498304850599 966.54928496793 79.369 1 -1.0555362200649872 0.3327158641741785 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 130520 8643 VSQKVLPP True PC9_epitope_Rep6 866.5225531080598 866.52144993586 43.067 2 -1.055548390473459 0.3327245688643064 1.0 ['ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 127744 13691 VPASTLAPV True NCI_RA007_Epitope_Rep5 853.4909186266099 853.49037496793 59.346 1 -1.0556359548866614 0.33274200070438154 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C'] 22166 4245 ESSRRLAEIQE True NCI_RA007_Epitope_Rep1 1316.6684420475997 1316.6668049037899 20.624 3 -1.0556432121181965 0.33274200070438154 1.0 ['ENSG00000101997|ENST00000376227|CCDC22'] 82113 22483 PMVVVPVDV True PC9_epitope_Rep5 953.5255898831698 953.52448993586 91.482 2 -1.0556532716143687 0.33274200070438154 1.0 ['nc|ENSG00000120899|Q14289-2|PTK2B', 'ENSG00000120899|ENST00000346049|PTK2B'] 66684 14322 LSLAVPWRLT True H1975_Epitope_Rep3 1154.68117900778 1154.68008993586 60.436 2 -1.055662294222415 0.33274200070438154 1.0 ['ENST00000567427.1_1_16:1555444-1556512:+|nuORF'] 109507 4060 TDPAMEPRFKV True H1975_Epitope_Rep2 1289.6438075228898 1289.64217490379 20.703 3 -1.0556684980577336 0.33274200070438154 1.0 ['ENSG00000103089|ENST00000219368|FA2H'] 68820 14007 LTLRKERKCNK True H1975_Epitope_Rep1 1387.8081875093897 1387.8070899358602 59.04 2 -1.0558355675515463 0.3328246266223179 1.0 ['ENST00000381396.9_1_16:19535357-19543792:+|nuORF'] 139001 19645 YKTFLIWVLI True NCI_RA007_Epitope_Rep5 1294.76893138302 1294.7678299358602 82.478 2 -1.055836325920314 0.3328246266223179 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 36433 15650 GVGARGPR True PC9_epitope_Rep3 768.43546943916 768.43436993586 65.343 2 -1.0558684662698594 0.3328333289854694 1.0 ['ENST00000370210.3_2_X:152736080-152736602:-|nuORF'] 97714 18942 SEIEILAVDLP True PC9_epitope_Rep3 1197.6492697428098 1197.64816993586 78.086 2 -1.05589000940956 0.3328420311216038 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 102801 894 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 5.015 2 -1.055981953778354 0.33287681953357334 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 16028 3073 EDTRTQQTRR True NCI_RA007_Epitope_Rep3 1289.6436242820898 1289.64196490379 17.181 3 -1.0561445060093213 0.33294205110145947 1.0 ['STAB1|p.S2079Mfs*27|1|0.08|ENSG00000010327|chr3:52521915-52521933|AGCCTGGGCTATGAAGGGG/-|frameshift_variant', 'ENSG00000010327|ENST00000321725|STAB1', 'nc|ENSG00000010327|Q9NY15-2|STAB1', 'ENST00000481607.1_1_3:52529402-52542549:+|nuORF'] 66276 4829 LSFIHPLAFHH True NCI_RA007_Epitope_Rep5 1317.6982260542502 1317.6965849037902 25.265 3 -1.0561626680890606 0.33294205110145947 1.0 ['LRRN2|p.R329L|1|0.19|ENSG00000170382|chr1:204619007-204619007|C/A|missense_variant'] 46641 16813 ITDLKKHP True PC9_epitope_Rep2 950.5549158654999 950.55380993586 69.92 2 -1.0562309961882586 0.33294205110145947 1.0 ['ENSG00000177483|ENST00000316997|RBM44'] 133200 11033 VVSASEYQILQ True H1975_Epitope_Rep2 1235.63976768827 1235.6386699358602 47.468 2 -1.0562588585983395 0.3329507512520868 1.0 ['ENST00000478946.1_1_2:74071889-74072120:+|nuORF'] 104741 21591 SQVKPLFQFFV True PC9_epitope_Rep6 1338.73360850346 1338.73195490379 95.926 3 -1.0563455198957241 0.3330246631799982 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 60997 12279 LIEILEENRK True NCI_RA007_Epitope_Rep2 1255.7136013348697 1255.71250993586 52.364 2 -1.0563719347185092 0.333042060645582 1.0 ['nc|ENSG00000115970|Q6YHU6-6|THADA', 'nc|ENSG00000115970|Q6YHU6-5|THADA', 'nc|ENSG00000115970|Q6YHU6-3|THADA', 'ENSG00000115970|ENST00000405975|THADA'] 101327 7769 SLIPTRGGAP True PC9_epitope_Rep2 967.5450794577898 967.5439899358599 35.257 2 -1.0563786191052456 0.333042060645582 1.0 ['ENST00000531239.2_1_11:67120490-67120989:-|nuORF'] 16725 17752 EESLGEEIHYP True PC9_epitope_Rep2 1301.57756135453 1301.5764699358601 73.564 2 -1.0564439765549514 0.33306815514228333 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 83658 5649 PVEKREDP True H1975_Epitope_Rep2 968.4927095317598 968.49160993586 26.728 2 -1.05644640638433 0.33306815514228333 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D'] 123675 7824 VGQTKDEN True PC9_epitope_Rep4 889.4141248578899 889.41302993586 37.502 2 -1.0564549519029895 0.33306815514228333 1.0 ['ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 91939 25219 RKMRMRWKRRR True PC9_epitope_Rep1 1658.9674396291396 1658.96634993586 101.89 2 -1.0564911760490174 0.3330812262834639 1.0 ['GPIHBP1|p.A3Rfs*77|1|0.18|ENSG00000277494|chr8:143213273-143213273|G/-|frameshift_variant'] 19025 9852 ELFDEILL True PC9_epitope_Rep5 990.52736370498 990.52626993586 42.865 2 -1.0565096600362838 0.3330812262834639 1.0 ['nc|ENSG00000185261|Q8IV33-3|KIAA0825', 'nc|ENSG00000185261|Q8IV33|KIAA0825', 'ENSG00000185261|ENST00000682413|KIAA0825'] 104106 10926 SQEEHQDFLQF True H1975_Epitope_Rep3 1406.61025846514 1406.60916993586 47.113 2 -1.0565097058070878 0.3330812262834639 1.0 ['ENSG00000172215|ENST00000304552|CXCR6'] 14895 14575 DYARRSYANIK True NCI_RA007_Epitope_Rep2 1355.6945972257897 1355.6935099358602 61.358 2 -1.056531265226988 0.3330812262834639 1.0 ['ENSG00000127989|ENST00000351870|MTERF1'] 93957 23871 RRHRRPQRVIA True PC9_epitope_Rep1 1443.8759646891099 1443.87430490379 96.622 3 -1.056556616086179 0.3330812262834639 1.0 ['GABRQ|p.R369Q|1|0.17|ENSG00000268089|chrX:152651730-152651730|G/A|missense_variant'] 114459 21852 TPVSPQHFI True PC9_epitope_Rep5 1024.53418042092 1024.53308993586 89.089 2 -1.0565703223988525 0.3330812262834639 1.0 ['nc|ENSG00000147364|Q8TCJ0-3|FBXO25', 'ENSG00000147364|ENST00000350302|FBXO25', 'nc|ENSG00000147364|Q8TCJ0|FBXO25'] 16306 9142 EEGENRRREWK True NCI_RA007_Epitope_Rep2 1487.72293723195 1487.72184993586 40.167 2 -1.056570330046687 0.3330812262834639 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2', 'ENST00000505524.1_1_5:36108630-36114563:-|nuORF'] 40701 23841 HRSAAILGAW True PC9_epitope_Rep4 1080.58286194884 1080.5817699358602 100.12 2 -1.0565771623685953 0.3330812262834639 1.0 ['nc|ENSG00000103502|O14735-2|CDIPT', 'ENST00000563893.5_1_16:29872371-29874522:-|nuORF'] 66895 9992 LSNLLQEHQ True NCI_RA007_Epitope_Rep3 1080.55637241748 1080.55526993586 46.392 2 -1.0565817490382001 0.3330812262834639 1.0 ['OR5AN1|p.Q90H|1|0.17|ENSG00000176495|chr11:59364728-59364728|G/T|missense_variant'] 28302 2256 FRRCWLVFK True NCI_RA007_Epitope_Rep1 1253.6855531955696 1253.68390490379 11.867 3 -1.056626473450205 0.3331290423534321 1.0 ['ENSG00000206052|ENST00000382713|DOK6'] 20947 8891 EQPEDCTMQL True H1975_Epitope_Rep1 1192.4740248861199 1192.47292993586 39.109 2 -1.056646342205169 0.33313340200539815 1.0 ['ENSG00000204843|ENST00000628224|DCTN1', 'nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENST00000466110.5_1_2:74593906-74595252:-|nuORF'] 62697 12546 LLLLPGTLQ True NCI_RA007_Epitope_Rep4 966.61136811246 966.61026993586 55.274 2 -1.0566735779638257 0.33313340200539815 1.0 ['ENST00000590882.1_1_19:19459915-19460169:+|nuORF', 'ENST00000587709.5_1_19:19459678-19460169:+|nuORF', 'ENST00000587362.5_1_19:19458179-19460169:+|nuORF'] 15957 9133 EDPQTIAECY True H1975_Epitope_Rep1 1167.47540478511 1167.4743099358602 40.036 2 -1.0567573641042132 0.33313340200539815 1.0 ['HORMAD1|p.S112A|1|0.11|ENSG00000143452|chr1:150708955-150708955|A/C|missense_variant'] 85041 22045 QEIAVNLWP True PC9_epitope_Rep4 1068.56039516876 1068.55928993586 93.019 2 -1.0567650975105864 0.33313340200539815 1.0 ['ITGB5|p.R119W|1|0.28|ENSG00000082781|chr3:124859248-124859248|G/A|missense_variant'] 57244 16483 LDWPFPQV True PC9_epitope_Rep5 1000.5018176634798 1000.50072993586 68.4 2 -1.0567675282258204 0.33313340200539815 1.0 ['ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 86387 12362 QKENLFMDLL True NCI_RA007_Epitope_Rep2 1249.63765951329 1249.63656993586 52.691 2 -1.0567994724296 0.3331334098258058 1.0 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 88727 10446 QTINGQLLQT True PC9_epitope_Rep6 1114.5982372294598 1114.5971499358602 50.933 2 -1.056818151784095 0.3331334098258058 1.0 ['ENSG00000112624|ENST00000314073|BICRAL'] 137976 6011 YFMAGFAL True NCI_RA007_Epitope_Rep2 918.4309612223398 918.42986993586 27.992 2 -1.0568601813250695 0.3331334098258058 1.0 ['ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 58153 23363 LEKRGITSK True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 94.651 2 -1.0568985155755835 0.33317687553782366 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 9165 9222 AVLESRTLY True H1975_Epitope_Rep2 1050.57095985246 1050.5698699358602 40.426 2 -1.0569105349771124 0.33317687553782366 1.0 ['ENSG00000141434|ENST00000269202|MEP1B'] 84453 10138 QAGNGSWG True PC9_epitope_Rep3 775.3249159306699 775.32380993586 43.948 2 -1.0570214431244602 0.3332116550420442 1.0 ['ENSG00000081277|ENST00000367324|PKP1', 'nc|ENSG00000081277|Q13835|PKP1'] 20211 12242 ENKLFKDD True NCI_RA007_Epitope_Rep3 1007.4923751785899 1007.49126993586 55.302 2 -1.0570333883949696 0.3332116550420442 1.0 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'AKAP9|p.D2313Efs*5|1|0.13|ENSG00000127914|chr7:92077868-92077869|-/AATCAGAGCC|frameshift_variant'] 100954 4340 SLFLDLPWR True NCI_RA007_Epitope_Rep4 1145.62332977849 1145.62168490379 23.037 3 -1.0570879082182687 0.3332116550420442 1.0 ['ENST00000370659.1_2_6:63921784-63921865:+|nuORF'] 29574 25222 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 103.62 3 -1.0571176243520424 0.3332116550420442 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 111950 8296 TIQEMQQKLE True NCI_RA007_Epitope_Rep3 1246.62273772514 1246.6216499358602 39.754 2 -1.057124736886706 0.3332116550420442 1.0 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 65514 10730 LRPGDPVSL True PC9_epitope_Rep5 952.5341804209199 952.53308993586 46.265 2 -1.057144268188816 0.3332116550420442 1.0 ['ENST00000588912.1_1_19:10400815-10401250:+|nuORF'] 81656 23502 PLLLTWRFRR True PC9_epitope_Rep4 1356.814258866 1356.81316993586 98.704 2 -1.0571460659117706 0.3332116550420442 1.0 ['ENST00000273062.6_1_2:219270400-219270469:+|nuORF'] 63476 7916 LLWLSFEYLWP True NCI_RA007_Epitope_Rep1 1465.7645742785699 1465.76293490379 34.785 3 -1.0571616120354859 0.3332160037545465 1.0 ['ENST00000422090.2_1_19:50411206-50411455:-|nuORF'] 127071 9471 VLSVHYERFFP True H1975_Epitope_Rep3 1392.7190210684798 1392.7179299358602 41.434 2 -1.0571637953025548 0.3332160037545465 1.0 ['ENST00000374994.8_2_9:101911626-101911818:+|nuORF'] 79217 5106 PAPLRAAPA True PC9_epitope_Rep6 862.5024863698198 862.50138993586 27.322 2 -1.0571733057928074 0.333224696250717 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 62460 15190 LLIAFHVIMI True NCI_RA007_Epitope_Rep2 1168.7042229514798 1168.70312993586 63.778 2 -1.0573224543217994 0.33325511667318475 1.0 ['ENST00000265198.8_1_6:154476969-154477143:-|nuORF'] 19341 18905 ELLFLFLWKWK True NCI_RA007_Epitope_Rep1 1521.87479343389 1521.87368993586 77.678 2 -1.0573282019585506 0.33325511667318475 1.0 ['ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 13080 8764 DLQDPIVCL True H1975_Epitope_Rep3 1014.50558271458 1014.50448993586 38.717 2 -1.0573978572783844 0.33326380831953695 1.0 ['nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2'] 21996 4319 ESGLELKC True PC9_epitope_Rep5 877.4215187374499 877.4204299358599 21.683 2 -1.0574085972362721 0.33328119093243647 1.0 ['ENST00000264995.7_1_3:131188541-131190034:-|nuORF'] 99908 12258 SIMIHWQPPAP True PC9_epitope_Rep1 1275.64341360007 1275.64230993586 52.01 2 -1.0574270411588595 0.33328119093243647 1.0 ['nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1'] 119412 19383 VAQLDNIV True PC9_epitope_Rep4 870.4810822188999 870.47998993586 82.666 2 -1.0575526944189646 0.33332898818990014 1.0 ['CCNDBP1|p.D276N|1|0.4|ENSG00000166946|chr15:43191641-43191641|G/A|missense_variant'] 116790 8781 TVEATRLVV True NCI_RA007_Epitope_Rep3 986.5760452328999 986.57494993586 41.628 2 -1.0575765354019637 0.33333767842012646 1.0 ['ENST00000458001.2_1_13:114537574-114541183:+|nuORF'] 129469 21069 VRITFVRK True PC9_epitope_Rep2 1017.6447339294099 1017.64362993586 86.498 2 -1.0576389405835211 0.33339850878565097 1.0 ['ENST00000509182.1_1_5:61688751-61699599:-|nuORF', 'ENSG00000086189|ENST00000199320|DIMT1'] 62558 2764 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 14.2 2 -1.0576666691796714 0.3334071949947862 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 113532 16327 TLTNMNRYYY True H1975_Epitope_Rep3 1337.60742201417 1337.60632993586 68.276 2 -1.0576783896623598 0.3334071949947862 1.0 ['ENST00000484159.5_1_9:6434093-6493966:+|nuORF'] 80920 11433 PIASSTTSIV True NCI_RA007_Epitope_Rep5 974.52842633414 974.5273299358599 50.626 2 -1.0577252791161045 0.3334071949947862 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 65236 7390 LQSFVQGGQVG True NCI_RA007_Epitope_Rep1 1118.57202248162 1118.57092993586 32.74 2 -1.0577273484149006 0.3334071949947862 1.0 ['ENST00000496727.1_1_17:18154365-18154758:-|nuORF'] 97713 18411 SEIEILAVDLP True PC9_epitope_Rep2 1197.6492697428098 1197.64816993586 76.149 2 -1.0577435311573196 0.3334115377597039 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 82004 9018 PLVAHVAS True PC9_epitope_Rep6 792.4493881678 792.44828993586 44.721 2 -1.0577601924537192 0.3334115377597039 1.0 ['ENST00000393800.6_2_11:68382148-68382592:+|nuORF'] 28351 4301 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 21.881 2 -1.0578223863461935 0.3334332599090234 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 94060 19976 RRLALLQWI True NCI_RA007_Epitope_Rep5 1167.72404687927 1167.72241490379 83.752 3 -1.0578480873901972 0.3334636689475399 1.0 ['ENSG00000142686|ENST00000270815|C1orf216'] 42650 16044 IEHFSSPPN True PC9_epitope_Rep1 1026.47705946762 1026.4759699358601 66.528 2 -1.0578541023765073 0.3334636689475399 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant', 'WDFY3|p.N1161Kfs*4|1|0.29|ENSG00000163625|chr4:84794523-84794524|-/T|frameshift_variant'] 53095 25135 KPRKVRFKI True PC9_epitope_Rep1 1170.7713314248597 1170.77022993586 101.56 2 -1.057866347871147 0.3334853895680734 1.0 ['ENSG00000204928|ENST00000377976|GRXCR2'] 106242 8690 STENHRKKK True H1975_Epitope_Rep1 1126.6207040095398 1126.6196099358601 38.357 2 -1.0579174317158337 0.3334897299551663 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 84719 5419 QDREGRAVPQW True H1975_Epitope_Rep1 1340.6585460702397 1340.65744993586 25.901 2 -1.0579806339137567 0.3334897299551663 1.0 ['ENST00000356742.9_1_12:111125990-111126236:-|nuORF'] 101722 16362 SLNEVKNLL True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 68.071 2 -1.0579942600297891 0.33349407011599114 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant', 'CMTR2|p.M188Wfs*24|1|0.78|ENSG00000180917|chr16:71285360-71285360|A/-|frameshift_variant', 'CMTR2|p.S423Ifs*2|1|0.28|ENSG00000180917|chr16:71284654-71284655|-/T|frameshift_variant', 'ENSG00000180917|ENST00000434935|CMTR2'] 44404 7146 ILGAQVSEAVP True H1975_Epitope_Rep3 1082.5971746003 1082.5960699358602 32.459 2 -1.0579943130938971 0.33349407011599114 1.0 ['ENSG00000124370|ENST00000244217|MCEE'] 101324 19061 SLINVWITL True PC9_epitope_Rep1 1057.61718176889 1057.6160899358601 78.108 2 -1.0580992637332847 0.333559224844591 1.0 ['nc|ENSG00000165186|Q96NR3-2|PTCHD1', 'ENSG00000165186|ENST00000379361|PTCHD1'] 123368 9623 VGMFVKLR True NCI_RA007_Epitope_Rep4 948.5578930709598 948.55678993586 43.864 2 -1.0581126869917663 0.333559224844591 1.0 ['ENST00000504327.1_1_3:98501668-98501887:+|nuORF'] 10103 7723 AYTTGHWDNYK True NCI_RA007_Epitope_Rep5 1354.59421447818 1354.5931099358602 36.406 2 -1.0581255516883405 0.333559224844591 1.0 ['nc|ENSG00000163795|Q8N8E2-3|ZNF513', 'nc|ENSG00000163795|Q8N8E2-2|ZNF513', 'ENSG00000163795|ENST00000323703|ZNF513'] 141491 534 YTKHQIIQME True H1975_Epitope_Rep1 1289.64380752289 1289.64217490379 2.7971 3 -1.0581746681241155 0.33361569036293737 1.0 ['CCNB1|p.R283I|1|0.27|ENSG00000134057|chr5:69175019-69175019|G/T|missense_variant'] 132164 2603 VTVPPDVFF True NCI_RA007_Epitope_Rep5 1019.53278343859 1019.53168993586 14.729 2 -1.0581756771899586 0.33361569036293737 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 45109 23381 IPLIERLQRN True PC9_epitope_Rep5 1250.7459045226599 1250.74426490379 94.92 3 -1.0581800742354794 0.3336200268449379 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 41847 15150 IAWEPVQYFN True PC9_epitope_Rep3 1265.6080736371698 1265.60641490379 63.415 3 -1.0582007535187443 0.3336200268449379 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 7024 21474 AQPIFGAIA True PC9_epitope_Rep5 886.4912529797798 886.49014993586 87.634 2 -1.058217842393689 0.333628710677891 1.0 ['ENST00000361716.7_1_12:6572127-6572325:-|nuORF'] 68272 12444 LTEDPFFL True PC9_epitope_Rep2 980.4854988929999 980.48440993586 53.171 2 -1.0582563903350457 0.33363304665102944 1.0 ['ENST00000443258.7_1_2:96688488-96688790:+|nuORF', 'ENST00000467292.6_1_2:96688598-96688790:+|nuORF'] 56781 12743 LDLWGKRSP True PC9_epitope_Rep3 1070.58727862294 1070.5861899358601 54.037 2 -1.0582572366066183 0.33363304665102944 1.0 ['MAP1A|p.R2625W|1|0.3|ENSG00000166963|chr15:43529346-43529346|C/T|missense_variant'] 17456 4587 EHEWEQIIDIL True H1975_Epitope_Rep3 1423.6983451935498 1423.69669490379 22.765 3 -1.0582884542815723 0.33365476081885825 1.0 ['nc|ENSG00000086717|O14829-2|PPEF1', 'ENSG00000086717|ENST00000470157|PPEF1'] 14678 10303 DVHHSDVP True NCI_RA007_Epitope_Rep1 904.40389452736 904.40278993586 44.073 2 -1.0583286236493497 0.3336764744207865 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP', 'ENST00000475488.3_1_7:149493482-149494663:+|nuORF'] 45985 8501 ISEYKEERIPK True H1975_Epitope_Rep3 1390.7456297391398 1390.74452993586 37.684 2 -1.0584452040249142 0.3336851569524256 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26'] 27335 18517 FLSIFFFFFFF True PC9_epitope_Rep4 1507.7580323461495 1507.7563949037901 79.299 3 -1.0585037401192423 0.33370686959241114 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|119|2|anti-sense'] 99289 13907 SHRHRLTRWLW True H1975_Epitope_Rep1 1546.83818219806 1546.8370899358601 58.645 2 -1.0585704435628553 0.3337155515017265 1.0 ['ENST00000264560.11_1_19:747626-748151:+|nuORF'] 101137 13960 SLGQRVLL True PC9_epitope_Rep4 884.5443511817999 884.54324993586 61.599 2 -1.0585990188787138 0.3337242331847914 1.0 ['nc|ENSG00000178149|Q5D0E6-3|DALRD3', 'ENST00000498794.1_1_3:49055454-49055997:-|nuORF', 'ENST00000484831.5_1_3:49054806-49055997:-|nuORF', 'ENST00000460505.5_1_3:49053470-49055997:-|nuORF', 'nc|ENSG00000178149|Q5D0E6-2|DALRD3', 'ENSG00000178149|ENST00000341949|DALRD3'] 22979 8130 EVETREKEP True H1975_Epitope_Rep1 1115.54586730343 1115.5447699358601 36.21 2 -1.058704086837691 0.333754625527701 1.0 ['nc|ENSG00000104221|Q9HAW0-2|BRF2', 'ENSG00000104221|ENST00000220659|BRF2'] 118940 17024 VADSLKAVP True PC9_epitope_Rep3 898.5123823471799 898.51128993586 70.639 2 -1.058745889282664 0.333754625527701 1.0 ['nc|ENSG00000134326|Q5EBM0-2|CMPK2'] 6948 6731 AQIRDYQRI True NCI_RA007_Epitope_Rep5 1161.6254550368099 1161.62380490379 32.563 3 -1.0587635945790992 0.333785016286645 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1'] 136855 22077 YADPSILYI True PC9_epitope_Rep1 1053.5382627418498 1053.53767496793 89.728 1 -1.0587637395868892 0.333785016286645 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 57845 4736 LEEWCPHF True NCI_RA007_Epitope_Rep5 1059.4484021916298 1059.4473099358602 24.901 2 -1.0588720740709658 0.3338110562453585 1.0 ['ENST00000476883.5_1_1:153925810-153930559:-|nuORF'] 115744 15461 TSCLMRHLYR True PC9_epitope_Rep5 1278.63253164654 1278.63142993586 64.481 2 -1.0588785722932423 0.3338110562453585 1.0 ['ENSG00000100426|ENST00000216268|ZBED4'] 33325 20944 GKPRRVLAPSP True H1975_Epitope_Rep2 1176.7091250911199 1176.7080299358602 86.706 2 -1.0588861417038007 0.3338110562453585 1.0 ['ENST00000523629.5_1_8:93088358-93115443:-|nuORF', 'ENST00000518832.1_3_8:93029584-93115476:-|nuORF'] 22682 9317 ETQNVTFSSP True H1975_Epitope_Rep1 1108.50366813828 1108.50256993586 40.744 2 -1.0589019734531053 0.3338153866197642 1.0 ['CCDC88C|p.Q1093P|1|0.16|ENSG00000015133|chr14:91305844-91305844|T/G|missense_variant'] 130547 11373 VSRFWIFSQVP True NCI_RA007_Epitope_Rep2 1364.7241064489199 1364.72300993586 48.826 2 -1.0589167510170137 0.3338153866197642 1.0 ['ENSG00000160185|ENST00000319294|UBASH3A'] 2077 7422 AELDWRRKH True H1975_Epitope_Rep3 1209.63668842685 1209.63558993586 33.526 2 -1.0589225817559862 0.333824065871072 1.0 ['ENSG00000168903|ENST00000342868|BTNL3', 'nc|ENSG00000113303|Q6UX41-4|BTNL8', 'nc|ENSG00000113303|Q6UX41-7|BTNL8', 'nc|ENSG00000113303|Q6UX41-6|BTNL8', 'ENSG00000113303|ENST00000340184|BTNL8'] 93832 24895 RRCHVGSV True PC9_epitope_Rep3 912.4712033248799 912.47010993586 101.14 2 -1.0589829954842411 0.33384577302395874 1.0 ['ENST00000462807.5_1_1:228327956-228334566:+|nuORF'] 48721 10502 KDASLQPPERL True NCI_RA007_Epitope_Rep2 1252.6775501793197 1252.67644993586 45.445 2 -1.0590081367462048 0.3338544516532479 1.0 ['ENSG00000156860|ENST00000356166|FBRS', 'ENST00000498588.1_1_16:30671247-30671787:+|nuORF', 'ENST00000484152.1_1_16:30671247-30673851:+|nuORF'] 15796 5625 EDDEDEDDDK True PC9_epitope_Rep1 1223.3949651045898 1223.39332490379 26.462 3 -1.0590893676261006 0.3339022134212275 1.0 ['ENSG00000152377|ENST00000394945|SPOCK1'] 125093 20297 VIEKHVFVVE True NCI_RA007_Epitope_Rep5 1197.6757592741699 1197.67411490379 85.013 3 -1.0592041270687709 0.33397167832623337 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 24916 8572 FCERGCEP True PC9_epitope_Rep1 939.3578729350698 939.35676993586 37.809 2 -1.059235584788915 0.33397167832623337 1.0 ['ENSG00000162591|ENST00000356575|MEGF6'] 113924 9088 TNSELSYTF True PC9_epitope_Rep2 1060.47130538084 1060.47020993586 40.299 2 -1.0592542612808131 0.3339803548630833 1.0 ['ENSG00000120328|ENST00000239450|PCDHB12'] 42926 15036 IERWTKEKTEP True NCI_RA007_Epitope_Rep1 1415.7408787118698 1415.73978993586 62.554 2 -1.0593412836484029 0.3340411396115316 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1'] 141643 3037 YTSFDMEEP True PC9_epitope_Rep6 1117.42739196353 1117.42628993586 17.458 2 -1.0594153044245171 0.334058461859108 1.0 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.P1892Lfs*5|1|0.23|ENSG00000104237|chr8:54629556-54629556|C/-|frameshift_variant'] 17971 3846 EIDILEREL True NCI_RA007_Epitope_Rep2 1128.60265390356 1128.60100490379 19.594 3 -1.0594446956693493 0.334058461859108 1.0 ['nc|ENSG00000006432|P80192-4|MAP3K9', 'ENSG00000006432|ENST00000554752|MAP3K9', 'MAP3K9|p.R539Hfs*33|1|0.07|ENSG00000006432|chr14:70740117-70740118|-/CGACAATGTG|frameshift_variant'] 65736 6131 LSCSDRHISE True NCI_RA007_Epitope_Rep2 1145.51352162933 1145.5124299358602 28.455 2 -1.0594528518548412 0.334058461859108 1.0 ['ENSG00000172769|ENST00000641865|OR5B3'] 3537 9387 AGLQRHWRAQL True PC9_epitope_Rep4 1334.73198579402 1334.7308899358602 43.715 2 -1.0594558612082556 0.334058461859108 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 123076 7511 VGKGHPPP True PC9_epitope_Rep1 787.4340724568299 787.43296993586 33.71 2 -1.05946192454352 0.334058461859108 1.0 ['ENST00000436054.1_1_9:74920469-74956553:+|nuORF'] 22741 20808 ETTIRRQVRRL True NCI_RA007_Epitope_Rep5 1426.84807817542 1426.84642490379 87.019 3 -1.0595124418132118 0.33406713647435815 1.0 ['nc|ENSG00000214787|Q96PG1-3|MS4A4E'] 136649 10149 WWRRRWTRSQW True H1975_Epitope_Rep1 1702.8705449554998 1702.86889490379 43.976 3 -1.059575200767845 0.3341018627067865 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 141607 7741 YTRQERYRARP True NCI_RA007_Epitope_Rep5 1494.7803925384198 1494.77875490379 36.474 3 -1.0595804163549958 0.33410618454644925 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF'] 79388 5255 PASPATAAP True PC9_epitope_Rep6 781.39701824177 781.39592993586 27.998 2 -1.059611006371904 0.33410618454644925 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 43189 9197 IFICSYFVYFY True NCI_RA007_Epitope_Rep1 1463.68354707655 1463.6818949037902 39.777 3 -1.0596472612333512 0.33411485808812996 1.0 ['ENST00000495933.1_1_2:46839372-46840883:-|nuORF'] 91941 25103 RKMRMRWKRRR True PC9_epitope_Rep3 1658.9674396291396 1658.96634993586 101.91 2 -1.0597683900133308 0.33419732985998046 1.0 ['GPIHBP1|p.A3Rfs*77|1|0.18|ENSG00000277494|chr8:143213273-143213273|G/-|frameshift_variant'] 141587 10839 YTQLVWANSFY True H1975_Epitope_Rep1 1390.6557521055797 1390.65464993586 46.653 2 -1.0597971337520287 0.33419732985998046 1.0 ['nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1', 'ENSG00000173401|ENST00000378695|GLIPR1L1'] 142006 10031 YVKGEKLTRCK True H1975_Epitope_Rep1 1323.7332912336299 1323.73218993586 43.523 2 -1.0598029929684452 0.33420600187558613 1.0 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 56692 5010 LDKQEWNPP True H1975_Epitope_Rep3 1125.54547338061 1125.54436993586 24.397 2 -1.0598576744449553 0.33423201656703005 1.0 ['ENSG00000228075|ENST00000585477|BOD1L2'] 112683 15275 TLGDLFAGGFP True PC9_epitope_Rep1 1093.54441075145 1093.5433099358602 63.576 2 -1.0598587700651458 0.33423201656703005 1.0 ['ENSG00000122574|ENST00000242140|WIPF3'] 57062 8060 LDSGDLARF True H1975_Epitope_Rep3 992.4927095317599 992.49160993586 35.976 2 -1.0598595870760608 0.33423201656703005 1.0 ['ENSG00000162639|ENST00000651461|HENMT1'] 49585 8650 KFVSKKMKK True NCI_RA007_Epitope_Rep5 1122.6947208969398 1122.6930749037901 39.941 3 -1.0599376434438288 0.3342406876790831 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN'] 34514 6393 GPPSPAQTLR True NCI_RA007_Epitope_Rep3 1022.55089311422 1022.5497899358601 32.15 2 -1.0599759253436858 0.33426238262070046 1.0 ['ENST00000562285.1_1_16:29831087-29841859:+|nuORF', 'ENST00000609618.2_1_16:29831081-29831285:+|nuORF'] 19438 12968 ELNFRSNKNVW True NCI_RA007_Epitope_Rep1 1405.71024728993 1405.70914993586 54.433 2 -1.0600265034438687 0.33429710088301945 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant'] 32968 7136 GIEAEKVSK True H1975_Epitope_Rep3 959.5287606873098 959.52766993586 32.42 2 -1.0601055062965659 0.33434048760158364 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000586052.5_1_17:76450753-76471822:-|nuORF'] 136066 11159 WRGRWRRRWGW True H1975_Epitope_Rep1 1656.8762990422797 1656.87520993586 47.892 2 -1.0601421121824324 0.33434048760158364 1.0 ['ENST00000216410.7_1_14:53258232-53258316:-|nuORF'] 28348 3857 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 20.103 2 -1.060183996330517 0.33434915673634175 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 68486 11353 LTFPMWNP True PC9_epitope_Rep2 1004.47897404392 1004.47786993586 48.992 2 -1.0602126654730528 0.33437084885265544 1.0 ['ENST00000403290.5_1_11:13331558-13347974:+|nuORF'] 95715 6923 RYFWHVREEEF True NCI_RA007_Epitope_Rep1 1596.74736107464 1596.74626993586 30.933 2 -1.0602681185031637 0.33437951736622085 1.0 ['LRFN2|p.A582Pfs*75|1|0.29|ENSG00000156564|chr6:40392570-40392570|G/-|frameshift_variant', 'ENSG00000156564|ENST00000338305|LRFN2'] 14553 12797 DTSYEWDLDKK True H1975_Epitope_Rep2 1398.6303252033797 1398.6292299358602 54.329 2 -1.0603047682600806 0.3344142313903214 1.0 ['HTATSF1|p.P49S|1|0.05|ENSG00000102241|chrX:136497829-136497829|C/T|missense_variant'] 102799 436 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 2.4476 2 -1.060314158351256 0.3344272115221836 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 70063 8607 LVNFIERVP True NCI_RA007_Epitope_Rep1 1085.62332977849 1085.62222993586 37.481 2 -1.060340526935918 0.3344272115221836 1.0 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'ENST00000520983.5_1_8:28651295-28747426:-|nuORF', 'nc|ENSG00000104299|Q9NV88-2|INTS9'] 33059 17767 GILNVIKPL True PC9_epitope_Rep1 965.62735252977 965.62624993586 73.138 2 -1.0603458275116961 0.3344272115221836 1.0 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26'] 67637 18921 LSVQEGYLSSS True PC9_epitope_Rep4 1168.5611830144 1168.56008993586 80.866 2 -1.0603509006979854 0.33443587873736846 1.0 ['ZFP36L1|p.D301V|1|0.32|ENSG00000185650|chr14:68789648-68789648|T/A|missense_variant'] 10926 5304 DAEEALKQ True NCI_RA007_Epitope_Rep1 902.4345259492998 902.43342993586 24.712 2 -1.0604032359385782 0.3344445023178291 1.0 ['nc|ENSG00000166960|Q5BJE1-4|CCDC178', 'nc|ENSG00000166960|Q5BJE1-3|CCDC178', 'ENSG00000166960|ENST00000383096|CCDC178', 'CCDC178|p.Y477Ifs*4|1|0.36|ENSG00000166960|chr18:33245409-33245410|-/T|frameshift_variant', 'CCDC178|p.A563Hfs*8|1|0.13|ENSG00000166960|chr18:33224906-33224906|C/-|frameshift_variant', 'nc|ENSG00000166960|Q5BJE1-2|CCDC178'] 131467 17927 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 75.746 2 -1.0604166842793035 0.3344445023178291 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 15612 4089 EARWEVEKHGN True NCI_RA007_Epitope_Rep2 1353.6425616529298 1353.64090490379 20.543 3 -1.0604255544612144 0.3344445023178291 1.0 ['nc|ENSG00000177338|Q8N7U9-2|LINC00469', 'nc|ENSG00000177338|Q8N7U9|LINC00469'] 131468 18015 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 76.092 2 -1.0604754729341228 0.3344445023178291 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 76133 23570 NMTWKIKLR True NCI_RA007_Epitope_Rep4 1188.6801334619597 1188.6790299358602 102.26 2 -1.060567393845968 0.33447921142752973 1.0 ['ENSG00000226761|ENST00000533467|TAS2R46', 'nc|ENSG00000255374|P59539|TAS2R45'] 94409 15325 RRRRNDRRRQQ True H1975_Epitope_Rep3 1595.90536732443 1595.9042699358602 64.357 2 -1.0605914082885821 0.3345225849294913 1.0 ['CTIF|p.E356Rfs*4|1|0.1|ENSG00000134030|chr18:48758399-48758400|-/C|frameshift_variant', 'ENSG00000134030|ENST00000256413|CTIF', 'nc|ENSG00000134030|O43310-2|CTIF'] 116441 19064 TTKRVRLG True H1975_Epitope_Rep2 929.5770482924098 929.57594993586 79.141 2 -1.0606130014402875 0.3345225849294913 1.0 ['nc|ENSG00000148835|Q15542-2|TAF5', 'ENSG00000148835|ENST00000369839|TAF5'] 60013 12239 LGKFEKNV True PC9_epitope_Rep4 933.5283667644899 933.52726993586 54.895 2 -1.0606254237978765 0.33453125 1.0 ['ST18|p.K902Rfs*9|1|0.48|ENSG00000147488|chr8:52126102-52126102|T/-|frameshift_variant', 'ENSG00000147488|ENST00000689386|ST18'] 86161 7462 QIEAVLLNS True PC9_epitope_Rep3 985.54441075145 985.54330993586 33.706 2 -1.0607331946255445 0.33456595617244567 1.0 ['ENSG00000118971|ENST00000261254|CCND2'] 108971 19807 TAFEGRRAV True PC9_epitope_Rep4 1005.5355774032498 1005.53448993586 84.314 2 -1.0607433894000236 0.3345746204525924 1.0 ['F13A1|p.G10E|1|0.19|ENSG00000124491|chr6:6318636-6318636|C/T|missense_variant'] 46597 7997 ITCRYRDYRYP True H1975_Epitope_Rep3 1504.7245174550799 1504.7234299358602 35.731 2 -1.0607985867653877 0.3345963048318425 1.0 ['ENSG00000171714|ENST00000324559|ANO5', 'ENST00000532043.1_1_11:22294373-22299379:+|nuORF'] 105339 22004 SRPRKPHK True PC9_epitope_Rep2 1004.5991807193199 1004.59808993586 90.112 2 -1.0608288767235259 0.3346049684912244 1.0 ['ENSG00000283199|ENST00000636427|C13orf46'] 80810 11856 PHNLLKVL True PC9_epitope_Rep1 932.58073669052 932.57962993586 50.469 2 -1.060839499558604 0.3346136319250049 1.0 ['ENST00000428931.5_1_1:154227324-154227648:+|nuORF'] 67872 603 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 3.1502 3 -1.06086093342484 0.3346222951331927 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 8085 6108 ATDVGKRN True NCI_RA007_Epitope_Rep5 859.4511790729499 859.45008993586 30.175 2 -1.0608736870645366 0.33463095811579674 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 72107 17822 MFKLILPV True H1975_Epitope_Rep2 959.5877962169099 959.58668993586 73.875 2 -1.0608858661292653 0.33465264034996356 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 121753 19107 VFLWKLFE True PC9_epitope_Rep4 1080.60080342876 1080.5997099358601 81.586 2 -1.060929443195407 0.334656945710194 1.0 ['ENST00000234111.8_1_2:10580547-10580775:-|nuORF'] 43327 22418 IFWKLVKW True PC9_epitope_Rep4 1118.6640723916598 1118.66296993586 94.462 2 -1.0609463386184659 0.334656945710194 1.0 ['ENST00000255305.10_3_13:21436952-21442818:-|nuORF'] 18246 18530 EIPSPWPPWR True PC9_epitope_Rep3 1263.64004247179 1263.63838490379 76.494 3 -1.0611015747737695 0.33476970343947715 1.0 ['PRAMEF6|p.F385Sfs*15|1|0.15|ENSG00000232423|chr1:12938954-12938954|G/-|frameshift_variant'] 71763 6373 MEGAVLPV True PC9_epitope_Rep4 814.4258758418999 814.42476993586 31.598 2 -1.061126071628455 0.33476970343947715 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 2968 19864 AFFRKADGRE True PC9_epitope_Rep4 1195.60980497267 1195.6087099358601 84.537 2 -1.0611261044773295 0.33476970343947715 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 122014 11888 VFVLPFPV True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 52.383 2 -1.0611345228803277 0.33476970343947715 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 86159 7476 QIEAVLLNS True PC9_epitope_Rep1 985.54441075145 985.54330993586 33.575 2 -1.0612370109819578 0.3348260779004374 1.0 ['ENSG00000118971|ENST00000261254|CCND2'] 133227 6436 VVSQPPDT True PC9_epitope_Rep5 841.41814760917 841.4175949679301 29.73 1 -1.0613181542263739 0.3348260779004374 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 48778 9667 KDLIAKVQA True PC9_epitope_Rep5 984.5967806774798 984.59568993586 42.151 2 -1.0613557960493551 0.3348347371024643 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 130972 7406 VTDMFTDQEK True NCI_RA007_Epitope_Rep5 1212.5332540143997 1212.53161490379 35.165 3 -1.0614159107711434 0.3348824494259158 1.0 ['nc|ENSG00000137500|Q9GZT6-2|CCDC90B', 'ENSG00000137500|ENST00000529689|CCDC90B', 'ENST00000526265.5_1_11:82984683-82985032:-|nuORF', 'ENST00000533761.5_2_11:82978071-82985032:-|nuORF', 'ENST00000514414.1_1_4:74951714-74951975:-|nuORF', 'ENST00000260054.8_1_11:82972955-82984922:-|nuORF', 'nc|ENSG00000137500|Q9GZT6-3|CCDC90B'] 97638 7440 SEFSSSQGE True H1975_Epitope_Rep3 956.3723196155598 956.37122993586 33.596 2 -1.0614545062741374 0.3348911076686757 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 56448 8997 LDEKRRKRWDI True NCI_RA007_Epitope_Rep2 1513.8477438222499 1513.8466499358601 39.6 2 -1.0615278141418094 0.33495183545951573 1.0 ['ENSG00000188895|ENST00000398532|MSL1', 'ENST00000339569.9_1_17:38287776-38290619:+|nuORF', 'nc|ENSG00000188895|Q68DK7-3|MSL1', 'nc|ENSG00000188895|Q68DK7-2|MSL1'] 97032 14038 SCQLCPCLRWS True PC9_epitope_Rep4 1294.56206912822 1294.5609699358602 61.908 2 -1.0615416409986826 0.3349561323579183 1.0 ['ENST00000486818.5_1_7:72951040-72951097:-|nuORF'] 1825 6095 AEICHPRAVP True H1975_Epitope_Rep2 1091.5545985956699 1091.5535099358601 28.421 2 -1.0615710006013963 0.3349561323579183 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant'] 52651 19197 KLSKPVYL True PC9_epitope_Rep1 946.5851533646198 946.58404993586 78.636 2 -1.0615965772354734 0.33496908558411975 1.0 ['ENSG00000102897|ENST00000567954|LYRM1'] 118202 26520 TYKMCPIPPK True PC9_epitope_Rep3 1176.6035229340398 1176.60187490379 108.45 3 -1.061600868518857 0.33496908558411975 1.0 ['ENSG00000172346|ENST00000306149|CSDC2'] 109496 7612 TDLRVVQIY True H1975_Epitope_Rep2 1105.6131590176099 1105.61206993586 34.232 2 -1.0616068629949138 0.33496908558411975 1.0 ['ENST00000502187.5_1_14:98426074-98426648:-|nuORF'] 117016 6151 TVHPKFHYK True H1975_Epitope_Rep3 1155.61891310439 1155.6178099358601 28.671 2 -1.06165334846237 0.33500377476375187 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 38727 24197 HGGGKFKS True H1975_Epitope_Rep1 816.4242360491199 816.42312993586 100.36 2 -1.0616617468495757 0.33501243052572666 1.0 ['ENST00000304979.7_1_1:43124098-43124146:+|nuORF'] 59626 16712 LFYKYMHKKYR True NCI_RA007_Epitope_Rep2 1575.83842500851 1575.83732993586 69.739 2 -1.0616719437249758 0.3350210860623731 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-3|SLC8A3'] 113204 12868 TLQEWNDPL True PC9_epitope_Rep5 1114.5294889632999 1114.52838993586 54.505 2 -1.0616940530813053 0.3350297413737 1.0 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF'] 20676 8549 EQDHDWPKHWK True H1975_Epitope_Rep1 1504.68476081808 1504.68366993586 37.809 2 -1.0617843798001703 0.33507744370688536 1.0 ['nc|ENSG00000075399|Q9Y2B5-2|VPS9D1', 'ENSG00000075399|ENST00000389386|VPS9D1'] 23372 11537 EVRRHLQHFYW True H1975_Epitope_Rep3 1569.7953143265702 1569.7942099358602 49.502 2 -1.0618078002330582 0.33508609805937706 1.0 ['ENST00000509144.2_1_8:106809432-107072670:-|nuORF', 'ENST00000520594.5_1_8:106799777-107072670:-|nuORF', 'ENST00000520078.5_1_8:106810397-107072670:-|nuORF'] 83758 6077 PVHSGNLHIQ True NCI_RA007_Epitope_Rep5 1100.5726911879601 1100.5715899358602 30.057 2 -1.0618500439365528 0.3351034060885297 1.0 ['PCDHGA3|p.L732Ffs*55|1|0.3|ENSG00000254245|chr5:141346226-141346227|-/T|frameshift_variant', 'nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3', 'ENSG00000254245|ENST00000253812|PCDHGA3'] 29713 16071 FVLYLYKHRRR True NCI_RA007_Epitope_Rep1 1549.8993854722899 1549.89828993586 66.616 2 -1.0618790031662353 0.3351034060885297 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 41777 7547 IAQKICYYFIE True H1975_Epitope_Rep1 1389.70025976985 1389.69916993586 34.023 2 -1.0619060687159096 0.33510769831457016 1.0 ['nc|ENSG00000185917|Q9NVD3-3|SETD4', 'ENSG00000185917|ENST00000332131|SETD4', 'ENST00000487297.5_1_21:37408417-37414196:-|nuORF'] 110531 17379 TFLFEDFSK True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 79.464 2 -1.061920127087704 0.33510769831457016 1.0 ['ENSG00000109084|ENST00000226230|TMEM97'] 68394 6103 LTERSRYGMTD True NCI_RA007_Epitope_Rep3 1327.6190493270296 1327.61794993586 30.995 2 -1.0619409107792048 0.33511628209633126 1.0 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462'] 40937 3456 HSSREMKLPLD True NCI_RA007_Epitope_Rep1 1311.66052021619 1311.65887490379 17.342 3 -1.061977104198587 0.33511628209633126 1.0 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS', 'nc|ENSG00000188158|Q6T4R5-4|NHS', 'nc|ENSG00000188158|Q6T4R5-3|NHS'] 104457 23784 SQLLLRRHA True H1975_Epitope_Rep2 1092.6516102150001 1092.65050993586 97.991 2 -1.0619839742962573 0.33511628209633126 1.0 ['nc|ENSG00000168079|Q6ZMJ2-3|SCARA5', 'nc|ENSG00000168079|Q6ZMJ2-2|SCARA5', 'ENSG00000168079|ENST00000354914|SCARA5'] 93251 17583 RPRRPRRWWRQ True H1975_Epitope_Rep3 1648.9399619279998 1648.93886993586 73.445 2 -1.0619946941190397 0.33511628209633126 1.0 ['ENST00000372022.5_1_9:136199397-136199478:-|nuORF'] 44218 7146 IKHEHKSEK True NCI_RA007_Epitope_Rep4 1134.61455599994 1134.6129149037902 34.108 3 -1.0620540922093458 0.33515961530953525 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 73788 8300 NAGEDPELAR True NCI_RA007_Epitope_Rep1 1070.49925146418 1070.49867496793 36.286 1 -1.062069979050221 0.33515961530953525 1.0 ['DCD|p.G50E|1|0.62|ENSG00000161634|chr12:54645656-54645656|C/T|missense_variant'] 20766 10427 EQGDAAPLLR True H1975_Epitope_Rep1 1068.55637241748 1068.55577496793 45.061 1 -1.062076432849995 0.3351682673537909 1.0 ['ENSG00000257093|ENST00000536163|DENND11'] 28346 3468 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 18.619 2 -1.062155103876488 0.3352419869083716 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 128703 23122 VPWGIVKYLY True PC9_epitope_Rep2 1236.69068106232 1236.68958993586 94.43 2 -1.0622187853729468 0.33524627496909365 1.0 ['ENSG00000112164|ENST00000373256|GLP1R'] 44233 3861 IKKVKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 21.056 3 -1.0622243173836032 0.33524627496909365 1.0 ['PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'ENSG00000187257|ENST00000334955|RSBN1L'] 97061 13234 SDDYFIPSQ True H1975_Epitope_Rep1 1070.4556553167 1070.45454993586 56.002 2 -1.0622681261146667 0.3352549254352862 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 132017 7274 VTSSRQELNP True H1975_Epitope_Rep2 1129.57275075761 1129.57111490379 32.915 3 -1.0622803281939632 0.3352635756763439 1.0 ['ENSG00000135413|ENST00000257867|LACRT'] 66495 4520 LSHFCDVAA True PC9_epitope_Rep4 961.4327521274898 961.43164993586 23.875 2 -1.0623216083616487 0.33528523839267127 1.0 ['ENSG00000184058|ENST00000649276|TBX1'] 123456 8707 VGNYYYGQGHP True NCI_RA007_Epitope_Rep3 1253.5465360097699 1253.54488490379 41.333 3 -1.0623619015592705 0.33531554977228367 1.0 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 71350 8957 LYRHWIEI True PC9_epitope_Rep6 1128.60801406752 1128.60637490379 44.448 3 -1.0623621452880934 0.33531554977228367 1.0 ['nc|ENSG00000115607|O95256-2|IL18RAP', 'ENSG00000115607|ENST00000687160|IL18RAP'] 129000 18997 VQLGYSVLS True PC9_epitope_Rep6 964.5229470308799 964.52184993586 85.715 2 -1.0623959119875246 0.33532419877425146 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 95791 6253 RYIFDNVAK True PC9_epitope_Rep5 1124.5978433066398 1124.5961849037901 29.03 3 -1.0624738482266072 0.33535887159735595 1.0 ['ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF', 'nc|ENSG00000049449|Q15293-2|RCN1'] 58132 16220 LEKLRIQY True H1975_Epitope_Rep2 1061.62332977849 1061.62222993586 67.599 2 -1.0624996771126962 0.3353805316643462 1.0 ['ENST00000470800.1_1_21:30518012-30547210:+|nuORF', 'ENSG00000156265|ENST00000399928|MAP3K7CL', 'nc|ENSG00000156265|P57077-1|MAP3K7CL'] 93616 23588 RQPVFYYRRV True PC9_epitope_Rep5 1382.7571379127 1382.7560499358601 95.712 2 -1.0626149881862288 0.3354542379056393 1.0 ['ENSG00000136770|ENST00000376980|DNAJC1', 'ENST00000376946.2_1_10:22209591-22217997:-|nuORF'] 97987 7242 SEPQARGDP True NCI_RA007_Epitope_Rep2 955.4359229316299 955.43482993586 32.789 2 -1.0627264941562442 0.3354758961681088 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A'] 55967 9640 LARSPLPV True NCI_RA007_Epitope_Rep1 851.5228874612299 851.5217899358599 41.497 2 -1.062777564179686 0.3354845425210784 1.0 ['ENST00000531791.1_1_11:65149384-65149630:-|nuORF'] 83059 12744 PSLLTFPQ True NCI_RA007_Epitope_Rep4 901.49091862661 901.49037496793 56.078 1 -1.0628144572331228 0.33549318864904953 1.0 ['ENST00000561040.1_1_19:47919907-47920643:-|nuORF'] 65576 23186 LRSPLPWQH True PC9_epitope_Rep6 1132.61416207712 1132.61306993586 102.28 2 -1.062888517428299 0.33550183455203103 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 113210 7530 TLQIRWRERF True NCI_RA007_Epitope_Rep5 1403.7786016332695 1403.77696490379 35.65 3 -1.0629115150244026 0.3355191256830601 1.0 ['TP53|p.G334W|1|0.35|ENSG00000141510|chr17:7670709-7670709|C/A|missense_variant'] 59069 14155 LEWGHVLLVP True PC9_epitope_Rep2 1161.65462990677 1161.65299490379 59.717 3 -1.062920170809214 0.3355191256830601 1.0 ['ENSG00000183208|ENST00000329600|GDPGP1'] 81691 10878 PLLVSGIG True NCI_RA007_Epitope_Rep5 754.45889022234 754.4583449679301 48.479 1 -1.0629481821275488 0.3355277709111253 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF'] 131813 10527 VTQKLPNILC True PC9_epitope_Rep1 1127.63726559047 1127.6356049037902 45.382 3 -1.0630330289951704 0.3355493397515124 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 58297 11012 LELWVNYYVRW True H1975_Epitope_Rep3 1539.7874349814701 1539.78632993586 47.446 2 -1.0630759665295333 0.3355493397515124 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 129316 14850 VQWLEQQV True PC9_epitope_Rep4 1028.5290950404797 1028.5279899358602 65.059 2 -1.063111430437432 0.3355493397515124 1.0 ['FURIN|p.V730Rfs*14|1|0.07|ENSG00000140564|chr15:90881677-90881678|-/T|frameshift_variant', 'ENSG00000140564|ENST00000268171|FURIN'] 60284 14910 LGRYPPWP True H1975_Epitope_Rep2 984.5181364339599 984.51702993586 62.504 2 -1.0631967932783661 0.3355493397515124 1.0 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'ENST00000587875.1_1_16:4882642-4897278:-|nuORF'] 102136 15053 SLRPYLCV True PC9_epitope_Rep5 949.50552314493 949.50442993586 62.907 2 -1.063211830816036 0.33555798402414594 1.0 ['ENST00000505764.5_1_4:156680217-156693886:+|nuORF'] 27689 25585 FPKFLLLLC True PC9_epitope_Rep1 1092.64056006576 1092.63997496793 103.43 1 -1.0632368097563316 0.33556226258000726 1.0 ['ENST00000333751.4_1_17:7256103-7256196:+|nuORF'] 141582 16206 YTQDQHLHNF True PC9_epitope_Rep2 1301.5788987672101 1301.5778099358602 67.585 2 -1.0633225782138176 0.33556226258000726 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 119374 12130 VAPHARIAI True PC9_epitope_Rep3 946.57123463598 946.57012993586 51.7 2 -1.0633468493249132 0.3355751843998387 1.0 ['nc|ENSG00000160323|Q76LX8-3|ADAMTS13', 'ENSG00000160323|ENST00000355699|ADAMTS13', 'nc|ENSG00000160323|Q76LX8|ADAMTS13'] 80498 5814 PGMFKEVYQK True NCI_RA007_Epitope_Rep2 1225.6165301458898 1225.6154299358602 27.233 2 -1.063427515796047 0.3355751843998387 1.0 ['ENSG00000122729|ENST00000309951|ACO1'] 140419 8858 YRFQWDRCYKI True PC9_epitope_Rep3 1576.7609029638 1576.7592449037902 39.023 3 -1.0634286701573223 0.3355751843998387 1.0 ['TRPC1|p.S509Tfs*48|1|0.08|ENSG00000144935|chr3:142792911-142792912|-/CT|frameshift_variant'] 60122 10484 LGLTQTCETLK True NCI_RA007_Epitope_Rep1 1205.6325741328499 1205.6314699358602 44.764 2 -1.0634723046168228 0.33562285357477367 1.0 ['ENSG00000169896|ENST00000544665|ITGAM', 'nc|ENSG00000169896|P11215-2|ITGAM'] 122354 8944 VGDFWRLVW True H1975_Epitope_Rep2 1176.6080140675197 1176.60637490379 39.363 3 -1.0635594855241461 0.3356445045724767 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'nc|ENSG00000080031|Q9HD43-3|PTPRH', 'PTPRH|p.T899R|1|0.36|ENSG00000080031|chr19:55186307-55186307|G/C|missense_variant'] 26338 17584 FHRCRFCFQL True PC9_epitope_Rep5 1355.6379513801498 1355.63684993586 72.645 2 -1.0636537966128026 0.3356487804878049 1.0 ['ENSG00000106034|ENST00000310396|CPED1', 'nc|ENSG00000106034|A4D0V7-2|CPED1', 'CPED1|p.H927Tfs*4|1|0.15|ENSG00000106034|chr7:121271333-121271334|-/A|frameshift_variant'] 125797 24113 VKVLPIPVL True NCI_RA007_Epitope_Rep3 976.6684890657599 976.66738993586 104.41 2 -1.0636719342380787 0.3356487804878049 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'nc|ENSG00000127838|Q8N490-4|PNKD', 'nc|ENSG00000127838|Q8N490-3|PNKD'] 44805 13143 IMTFYLLLL True PC9_epitope_Rep3 1125.65079039629 1125.64915490379 55.584 3 -1.0637164459451836 0.3356572409666762 1.0 ['ENST00000345016.9_1_19:2101131-2101335:-|nuORF'] 79606 14091 PDLAALPR True NCI_RA007_Epitope_Rep2 851.48650195251 851.4859549679301 59.473 1 -1.0637347308798493 0.3356572409666762 1.0 ['ENSG00000137507|ENST00000260061|LRRC32', 'LRRC32|p.Y404Ifs*27|1|0.32|ENSG00000137507|chr11:76660384-76660385|-/G|frameshift_variant'] 116715 19249 TVDFWLKV True PC9_epitope_Rep4 1006.5487678558999 1006.54766993586 82.144 2 -1.0637378957380654 0.3356572409666762 1.0 ['ENSG00000164659|ENST00000450689|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-3|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-2|ELAPOR2'] 28693 13667 FSQTKHHWWWK True H1975_Epitope_Rep1 1569.7629515691299 1569.76184993586 57.705 2 -1.0637508127044053 0.3356572409666762 1.0 ['ENSG00000168282|ENST00000305386|MGAT2'] 77451 13190 NSTRPARWYTK True PC9_epitope_Rep5 1378.7105816430997 1378.7094899358601 55.74 2 -1.0637711496487094 0.3356572409666762 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 56942 4748 LDQNLSRCFKF True NCI_RA007_Epitope_Rep2 1369.68125566077 1369.68014993586 23.099 2 -1.0637790126992084 0.3356572409666762 1.0 ['ENSG00000079101|ENST00000692774|CLUL1'] 91609 25308 RILTTRIHELK True PC9_epitope_Rep2 1378.8408675366597 1378.8397699358602 103.02 2 -1.0637900340540374 0.3356572409666762 1.0 ['ENST00000511325.1_1_3:128623240-128628375:+|nuORF', 'ENSG00000177646|ENST00000308982|ACAD9'] 85188 10403 QEPESGKVVQ True H1975_Epitope_Rep1 1099.5509526838698 1099.5503749679299 44.964 1 -1.0638325551364072 0.3356788887010132 1.0 ['nc|ENSG00000186868|P10636|MAPT', 'nc|ENSG00000186868|P10636-9|MAPT'] 123708 22582 VGRCRAWLRL True PC9_epitope_Rep4 1228.6975148615998 1228.69697496793 95.095 1 -1.0639081318228891 0.33570917604214084 1.0 ['ENSG00000225190|ENST00000430334|PLEKHM1', 'ENST00000578036.5_1_17:62801160-62825332:-|nuORF', 'ENST00000584585.1_1_17:62817020-62825332:-|nuORF', 'ENST00000580919.5_1_17:62811233-62825332:-|nuORF', 'ENST00000397718.8_1_17:62816508-62825332:-|nuORF', 'ENST00000582986.5_1_17:62801160-62833227:-|nuORF'] 26504 21304 FIFLFKWIEER True PC9_epitope_Rep1 1526.82857151746 1526.82746993586 86.773 2 -1.0639180510632293 0.33570917604214084 1.0 ['BAP1|p.G554Vfs*17|1|0.73|ENSG00000163930|chr3:52403484-52403484|C/-|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 27641 8230 FPERALAAELP True NCI_RA007_Epitope_Rep2 1212.6502728023197 1212.64916993586 36.65 2 -1.0639974232480527 0.33574382852534923 1.0 ['ENST00000337554.7_1_22:43547558-43555226:+|nuORF'] 73519 10023 MVKLETNNFK True H1975_Epitope_Rep1 1222.6379938664602 1222.6368899358602 43.491 2 -1.0640266156842988 0.3357524679074486 1.0 ['ENST00000517523.1_1_8:97243199-97243244:-|nuORF'] 136298 23480 WSLSYIFFP True PC9_epitope_Rep2 1158.57498260374 1158.57334490379 95.787 3 -1.064051704174856 0.33576110706482154 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 27644 19322 FPEVIINFP True PC9_epitope_Rep6 1074.57498260374 1074.57388993586 86.971 2 -1.0641059244410231 0.33580866670134735 1.0 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 70069 14834 LVNGKGSLSRP True PC9_epitope_Rep3 1126.64585612822 1126.64474993586 62.195 2 -1.0641089765581595 0.33580866670134735 1.0 ['nc|ENSG00000197568|Q9XRX5-2|ANKRD13C-DT'] 137904 4950 YEWWFRWRLDR True NCI_RA007_Epitope_Rep1 1711.8371791385496 1711.8355349037902 23.338 3 -1.0641231470852828 0.33580866670134735 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 12441 5253 DIWEYLFRQEM True H1975_Epitope_Rep1 1528.7020506749998 1528.70041490379 25.268 3 -1.0642065475892803 0.33580866670134735 1.0 ['ENSG00000187003|ENST00000333999|ACTL7A'] 136757 4432 WYPYNYSR True NCI_RA007_Epitope_Rep5 1147.50869394907 1147.50703490379 23.685 3 -1.0642547037114558 0.3358302122347066 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11'] 88969 15678 QVIEPHDIS True PC9_epitope_Rep2 1036.5189242796 1036.5178299358602 65.582 2 -1.064279837335894 0.3358302122347066 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 59625 16678 LFYKYMHKKYR True NCI_RA007_Epitope_Rep1 1575.83842500851 1575.83732993586 68.994 2 -1.064301389957402 0.3358302122347066 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-3|SLC8A3'] 41625 7144 IAEEKHKEWVQ True H1975_Epitope_Rep1 1395.71466396403 1395.71356993586 32.504 2 -1.0643380666270548 0.3358302122347066 1.0 ['ENST00000529615.1_1_11:27359677-27371953:-|nuORF', 'ENSG00000109881|ENST00000328697|CCDC34', 'nc|ENSG00000109881|Q96HJ3-2|CCDC34'] 17173 8624 EGRRWRVQRRP True NCI_RA007_Epitope_Rep2 1494.8392448272198 1494.83758490379 38.19 3 -1.0643780089956134 0.3358518537784309 1.0 ['ENST00000474959.5_1_1:153631432-153631540:+|nuORF'] 123694 5189 VGRAPKQA True PC9_epitope_Rep4 825.48208527841 825.48098993586 26.658 2 -1.0643960018397904 0.3358734947592915 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 133317 25183 VVTVIIII True PC9_epitope_Rep2 868.5997407995999 868.59864993586 102.53 2 -1.064503812051771 0.33595578673602083 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 10504 7974 CKFMIMAYDRY True NCI_RA007_Epitope_Rep1 1439.6399850957498 1439.63888993586 35.01 2 -1.06452017469218 0.33595578673602083 1.0 ['OR56A5|p.T117K|1|0.64|ENSG00000188691|chr11:5968145-5968145|G/T|missense_variant'] 101003 5292 SLFWPWAP True H1975_Epitope_Rep3 1002.4963383602199 1002.49524993586 25.435 2 -1.0645596140656324 0.3359774255211246 1.0 ['ENST00000567039.1_1_15:43620629-43622752:-|nuORF', 'ENST00000305641.6_1_15:43622500-43622752:-|nuORF'] 77973 12513 NVNLTIFTARL True H1975_Epitope_Rep3 1260.71902106848 1260.7179299358602 53.327 2 -1.0645985527069988 0.3360207014030662 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'ENSG00000244509|ENST00000361441|APOBEC3C'] 44425 11736 ILGVKKEMI True NCI_RA007_Epitope_Rep2 1029.6256382776098 1029.6245499358602 50.247 2 -1.0646485045716478 0.3360207014030662 1.0 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 133313 24691 VVTVIIII True H1975_Epitope_Rep1 868.5997407995999 868.59864993586 102.29 2 -1.0646992283928196 0.3360249658669787 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 81629 10192 PLLHDFVM True PC9_epitope_Rep3 970.49462410806 970.49352993586 44.157 2 -1.0647076055698415 0.3360249658669787 1.0 ['JAK2|p.D146H|1|0.12|ENSG00000096968|chr9:5044488-5044488|G/C|missense_variant'] 59396 19442 LFLLRWRIQ True NCI_RA007_Epitope_Rep5 1243.75534700755 1243.7536949037901 81.671 3 -1.0647445272968283 0.33604649650886115 1.0 ['ENST00000410023.5_1_2:102781350-102781467:+|nuORF'] 135561 24687 WKVGVTAL True PC9_epitope_Rep4 872.51198842436 872.5114349679301 103.45 1 -1.0647703820976389 0.33604649650886115 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 122127 12267 VGAGAGGGSW True NCI_RA007_Epitope_Rep2 817.3718661230901 817.3713149679301 52.317 1 -1.0647762333457678 0.33604649650886115 1.0 ['ENST00000537025.6_1_17:66032291-66032333:+|nuORF'] 119843 3233 VDEGEECSD True PC9_epitope_Rep1 981.32332081781 981.3227749679301 17.317 1 -1.0647784690775823 0.33604649650886115 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 24144 18407 EYQCQNLYQL True PC9_epitope_Rep5 1300.57578753272 1300.57468993586 75.823 2 -1.064815213939101 0.3360593925525276 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'nc|ENSG00000080910|P36980-2|CFHR2', 'ENSG00000080910|ENST00000367415|CFHR2', 'ENSG00000244414|ENST00000320493|CFHR1'] 102224 8501 SLSENRWHFLC True H1975_Epitope_Rep3 1390.6452045052197 1390.6441099358601 37.684 2 -1.064821484935943 0.3360593925525276 1.0 ['ENST00000581758.1_1_18:9182415-9208777:+|nuORF'] 129737 15346 VRQGLTQLS True NCI_RA007_Epitope_Rep4 1000.56654317836 1000.56544993586 66.694 2 -1.0648335062197145 0.3360593925525276 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'ENST00000482654.1_1_X:153040393-153040779:+|nuORF'] 127386 8215 VNEEQPEAK True H1975_Epitope_Rep3 1042.4931034545798 1042.49200993586 36.582 2 -1.0648991957784064 0.33607665704553136 1.0 ['ENSG00000165164|ENST00000378653|CFAP47'] 133316 24687 VVTVIIII True NCI_RA007_Epitope_Rep5 868.5997407995999 868.59864993586 102.44 2 -1.064903277370547 0.33607665704553136 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 51042 3636 KKKKKKRHSRK True PC9_epitope_Rep2 1450.96846809162 1450.96681490379 19.26 3 -1.0649126550971169 0.3360852889553403 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 56948 19847 LDQQEKMLL True PC9_epitope_Rep4 1116.58489566444 1116.58378993586 84.473 2 -1.0649454019551676 0.3360937053118744 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B', 'ENST00000496841.5_1_2:128377972-128392002:+|nuORF'] 44892 9428 INLLDVLHI True NCI_RA007_Epitope_Rep2 1048.62808080576 1048.6269899358601 41.283 2 -1.0649648462176005 0.3360937053118744 1.0 ['ENSG00000101751|ENST00000579534|POLI'] 135564 25758 WKVGVTAL True PC9_epitope_Rep5 872.51198842436 872.5114349679301 104.47 1 -1.0649760325057318 0.3360937053118744 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 19620 12840 ELQRENDLL True PC9_epitope_Rep1 1128.5775017848798 1128.57640993586 54.263 2 -1.0650860225684202 0.3360937053118744 1.0 ['ENSG00000187672|ENST00000288221|ERC2'] 96833 8897 SASERAKRRFW True H1975_Epitope_Rep1 1392.7374650972797 1392.73636993586 39.127 2 -1.065086914739828 0.3360937053118744 1.0 ['ENST00000562140.2_1_16:70404228-70404267:+|nuORF'] 138445 18822 YHKYYHYL True PC9_epitope_Rep3 1185.56072952193 1185.55909490379 77.622 3 -1.065087126818134 0.3360937053118744 1.0 ['EXT1|p.K730Tfs*15|1|0.1|ENSG00000182197|chr8:117799764-117799765|-/G|frameshift_variant', 'ENSG00000182197|ENST00000378204|EXT1'] 56728 6379 LDLFLILK True NCI_RA007_Epitope_Rep4 973.62120452017 973.62010993586 31.14 2 -1.0650876922478938 0.3360937053118744 1.0 ['ENST00000332180.9_1_12:105550539-105551042:+|nuORF'] 60400 13584 LGTLQFGEL True PC9_epitope_Rep1 976.5229470308799 976.52184993586 57.107 2 -1.0651127851797069 0.3361413361413361 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 74116 5909 NEAAPEIW True NCI_RA007_Epitope_Rep1 928.42904664604 928.4279499358599 27.036 2 -1.065163708429716 0.3361759658884093 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.G866V|1|0.07|ENSG00000106772|chr9:76709677-76709677|C/A|missense_variant'] 53275 27332 KQKKKKKKKNL True PC9_epitope_Rep3 1397.9558377192495 1397.95420490379 112.6 3 -1.065169492997303 0.33618459538511536 1.0 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF'] 131464 17280 VTKARLTDK True NCI_RA007_Epitope_Rep3 1030.61349337078 1030.6123899358602 75.858 2 -1.0651847138605375 0.3362062241634818 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 1559 5036 AEERLPAAP True H1975_Epitope_Rep3 952.4977949121998 952.49668993586 24.492 2 -1.0652576015201818 0.3362233689929937 1.0 ['nc|ENSG00000141314|P58872-3|RHBDL3', 'ENSG00000141314|ENST00000269051|RHBDL3'] 117064 9225 TVIIDNFNKH True NCI_RA007_Epitope_Rep2 1199.6298717109103 1199.6287699358602 40.492 2 -1.0652675259818765 0.3362233689929937 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 95643 5680 RYEHDRERERE True H1975_Epitope_Rep1 1573.7345645448102 1573.73290490379 26.915 3 -1.0652831600818584 0.3362233689929937 1.0 ['nc|ENSG00000123200|Q5T200-2|ZC3H13', 'nc|ENSG00000123200|Q5T200|ZC3H13', 'ENSG00000123200|ENST00000679008|ZC3H13'] 23931 7406 EYLGMLQYK True NCI_RA007_Epitope_Rep1 1143.5634319438698 1143.56179490379 32.804 3 -1.0653085467018137 0.3362233689929937 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 126741 24888 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 107.6 3 -1.0653121195053632 0.3362233689929937 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 66035 9048 LSEFEKNK True H1975_Epitope_Rep1 993.51311062317 993.51200993586 39.711 2 -1.0653406782244126 0.33623199708833773 1.0 ['nc|ENSG00000120669|Q9NX45-2|SOHLH2', 'ENSG00000120669|ENST00000379881|SOHLH2', 'nc|ENSG00000120669|Q9NX45-3|SOHLH2'] 19316 8844 ELKSGSGP True PC9_epitope_Rep3 773.3919328613299 773.39082993586 38.971 2 -1.0653788273829279 0.33623625445186783 1.0 ['ENSG00000197471|ENST00000652691|SPN'] 22101 8499 ESPWKPPTYLF True H1975_Epitope_Rep1 1363.68123857743 1363.68014993586 37.621 2 -1.0653867191748811 0.33623625445186783 1.0 ['ENSG00000170852|ENST00000304056|KBTBD2'] 120581 9114 VEGTARGVVV True PC9_epitope_Rep3 985.5556441414898 985.55454993586 39.995 2 -1.0654475821343514 0.3362838759992201 1.0 ['ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 125548 25455 VKKATILIS True PC9_epitope_Rep5 971.6379172134699 971.63736496793 103.15 1 -1.06553588232592 0.33634012243783873 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 115930 2627 TSGLPGTALP True PC9_epitope_Rep2 912.4916469026 912.49054993586 14.754 2 -1.0655382518410232 0.33634012243783873 1.0 ['ENST00000369649.8_1_X:153717326-153718941:-|nuORF', 'ENST00000263512.5_1_X:153717326-153718904:-|nuORF'] 125679 25269 VKMMKLHL True H1975_Epitope_Rep2 998.5769142633799 998.57580993586 103.8 2 -1.0655849895494427 0.33634874834282147 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 31427 8215 GEAGSRIPGL True PC9_epitope_Rep6 955.5086939490699 955.50758993586 41.174 2 -1.0656354542880162 0.33636599948011436 1.0 ['ENSG00000203837|ENST00000369230|PNLIPRP3'] 110415 5613 TEWLQSVKWYW True H1975_Epitope_Rep1 1524.7401504358797 1524.73849490379 26.657 3 -1.0656631113262094 0.33636599948011436 1.0 ['ENSG00000137628|ENST00000393743|DDX60'] 131465 17923 VTKARLTDK True NCI_RA007_Epitope_Rep4 1030.61349337078 1030.6123899358602 77.563 2 -1.0658111812683135 0.3364352369317148 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 99702 5864 SIHHHAWMAW True NCI_RA007_Epitope_Rep4 1274.57673102258 1274.5756299358602 29.177 2 -1.0658178146742796 0.3364352369317148 1.0 ['ENST00000576570.5_1_17:5389818-5391587:+|nuORF'] 75350 12397 NISCKASQDI True PC9_epitope_Rep3 1077.5124590001699 1077.51136993586 52.714 2 -1.0658297802883663 0.33644386103999063 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 125547 25575 VKKATILIS True PC9_epitope_Rep3 971.6379172134699 971.63736496793 103.86 1 -1.0658413250764422 0.33646110858405354 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 131250 12342 VTFFFFNVLY True NCI_RA007_Epitope_Rep2 1295.65904658087 1295.6579499358602 52.612 2 -1.065883315559516 0.33646110858405354 1.0 ['ENST00000486255.1_1_X:151123175-151124345:-|nuORF', 'ENSG00000102287|ENST00000370328|GABRE'] 32543 24326 GGGGGGGD True H1975_Epitope_Rep3 532.1877537515201 532.18720496793 101.3 1 -1.0659355576783172 0.3364782326185835 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000120093|ENST00000498678|HOXB3', 'HOXB3|p.P289Rfs*140|1|0.29|ENSG00000120093|chr17:48550764-48550764|G/-|frameshift_variant', 'WIPF1|p.G89D|1|0.07|ENSG00000115935|chr2:174575296-174575296|C/T|missense_variant', 'HOXB3|p.S181C|1|0.22|ENSG00000120093|chr17:48551089-48551089|T/A|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENST00000470900.1_1_3:51422898-51423054:+|nuORF', 'ENSG00000206418|ENST00000649141|RAB12', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ZXDB|p.S747Cfs*17|1|0.09|ENSG00000198455|chrX:57594287-57594288|AG/-|frameshift_variant', 'ENSG00000198455|ENST00000374888|ZXDB', 'ZXDB|p.F334Lfs*22|1|0.19|ENSG00000198455|chrX:57593045-57593045|C/-|frameshift_variant'] 13762 5895 DQERERQWRL True H1975_Epitope_Rep1 1414.7065588918197 1414.70546993586 27.746 2 -1.0659511199902427 0.3364782326185835 1.0 ['LRRC59|p.R161W|1|0.24|ENSG00000108829|chr17:50388081-50388081|G/A|missense_variant'] 14933 10316 DYEATRLEGLP True H1975_Epitope_Rep3 1262.6142812164198 1262.6131899358602 44.732 2 -1.0659696371366425 0.3364782326185835 1.0 ['nc|ENSG00000102103|O60828-8|PQBP1', 'nc|ENSG00000102103|O60828-10|PQBP1', 'nc|ENSG00000102103|O60828-9|PQBP1', 'ENST00000486150.5_1_X:48755780-48758817:+|nuORF', 'nc|ENSG00000102103|O60828-7|PQBP1', 'nc|ENSG00000102103|O60828-6|PQBP1', 'ENST00000470062.5_1_X:48755362-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-5|PQBP1', 'nc|ENSG00000102103|O60828-4|PQBP1', 'ENST00000472742.5_1_X:48755271-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-3|PQBP1', 'nc|ENSG00000102103|O60828-2|PQBP1', 'ENSG00000102103|ENST00000447146|PQBP1'] 48520 12335 KAKELDPSN True PC9_epitope_Rep4 1000.5189242795999 1000.51782993586 55.256 2 -1.06599904616779 0.3364782326185835 1.0 ['ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 138987 17867 YKREMPQG True NCI_RA007_Epitope_Rep2 1007.4858503295097 1007.48474993586 74.238 2 -1.0660000476827811 0.3364782326185835 1.0 ['ENSG00000050555|ENST00000361069|LAMC3', 'LAMC3|p.D1061Tfs*20|1|0.24|ENSG00000050555|chr9:131071590-131071590|G/-|frameshift_variant'] 27585 22087 FNLMINKYF True PC9_epitope_Rep5 1188.6001518057599 1188.5990499358602 89.987 2 -1.0660185534934035 0.33648248258654745 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9', 'SAMD9|p.T529Hfs*5|1|0.05|ENSG00000205413|chr7:93104516-93104516|G/-|frameshift_variant', 'SAMD9|p.D274N|1|0.1|ENSG00000205413|chr7:93105278-93105278|C/T|missense_variant'] 102796 2792 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 15.173 2 -1.0660191788642426 0.33648248258654745 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 67524 17698 LSTKFKYRYE True PC9_epitope_Rep4 1333.7030366511697 1333.70192993586 76.1 2 -1.0661154678051992 0.3364997271097019 1.0 ['ENSG00000166349|ENST00000299440|RAG1'] 125545 25061 VKKATILIS True NCI_RA007_Epitope_Rep5 971.6379172134699 971.63736496793 103.9 1 -1.0661879184954686 0.3364997271097019 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 139814 18214 YPKKFLKRS True PC9_epitope_Rep4 1165.69716342509 1165.69552490379 78.128 3 -1.066386551327769 0.3365559540516659 1.0 ['ENST00000261716.7_1_17:27870369-27870516:+|nuORF'] 8902 16660 AVFPSIVGR True PC9_epitope_Rep5 944.5443511817999 944.54324993586 69.088 2 -1.066396537222525 0.3365559540516659 1.0 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34429 17187 GPKAKKSGSK True NCI_RA007_Epitope_Rep3 986.5872786229398 986.58618993586 75.497 2 -1.0665403824595125 0.33662517217183396 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7'] 64137 6158 LPERYNWQLQ True PC9_epitope_Rep6 1345.6778845324898 1345.6762349037901 32.123 3 -1.0666035014033237 0.33662517217183396 1.0 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 72732 22546 MNKAHGCE True NCI_RA007_Epitope_Rep3 888.3582072882399 888.35710993586 98.002 2 -1.066646722305256 0.33662941787941786 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 52399 22462 KKNASQKRRS True PC9_epitope_Rep4 1201.7003513125699 1201.69924993586 94.632 2 -1.0666728124533653 0.33662941787941786 1.0 ['ENSG00000106617|ENST00000287878|PRKAG2', 'ENST00000474383.1_1_7:151534428-151573717:-|nuORF', 'PRKAG2|p.P163Afs*9|1|0.05|ENSG00000106617|chr7:151675617-151675618|-/GTGGC|frameshift_variant', 'ENST00000481434.5_1_7:151372433-151573717:-|nuORF'] 136562 18490 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 77.948 2 -1.0666875349386566 0.33665103104169647 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 91237 23143 RGGGGGGA True H1975_Epitope_Rep2 587.2775718154301 587.2770249679301 95.478 1 -1.0667164916918406 0.3366596502169902 1.0 ['ENSG00000130226|ENST00000377770|DPP6', 'ENST00000358731.8_2_5:70751498-70751573:+|nuORF', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'MCU|p.R94Lfs*2|1|0.33|ENSG00000156026|chr10:72859236-72859237|-/T|frameshift_variant', 'ENSG00000163013|ENST00000520530|FBXO41', 'ENSG00000169840|ENST00000302945|GSX1'] 66639 22370 LSKLVYPEV True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 90.864 2 -1.066772223179173 0.3366812624248015 1.0 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.V569Afs*28|1|0.12|ENSG00000156222|chr15:84944607-84944608|GT/-|frameshift_variant'] 67382 15604 LSSLHLSPP True PC9_epitope_Rep6 949.52328138405 949.52218993586 72.227 2 -1.0668020873180888 0.33669412467842946 1.0 ['ENST00000564440.5_1_15:72491410-72491662:-|nuORF'] 125719 21277 VKRLLKKQVVR True H1975_Epitope_Rep1 1365.92962297141 1365.92797490379 88.39 3 -1.0668099771034902 0.33669412467842946 1.0 ['ENSG00000175931|ENST00000319380|UBE2O'] 14491 2830 DTHINIHKAQ True NCI_RA007_Epitope_Rep1 1175.60471959223 1175.60308490379 14.834 3 -1.066830272544639 0.33669412467842946 1.0 ['nc|ENSG00000082512|O00463-3|TRAF5', 'ENSG00000082512|ENST00000261464|TRAF5', 'nc|ENSG00000082512|O00463-2|TRAF5'] 126347 8978 VLIPMFETVTK True PC9_epitope_Rep1 1276.7100961775598 1276.70845490379 39.379 3 -1.066887263521218 0.33671573531513505 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A'] 13266 16376 DLSYSMKDDLW True H1975_Epitope_Rep3 1371.6016679273898 1371.6005699358602 68.463 2 -1.0669671499642328 0.33674569665475806 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 36419 15433 GVFREFWEFRT True NCI_RA007_Epitope_Rep2 1472.7200836976394 1472.71898993586 64.731 2 -1.0670404332463403 0.33674569665475806 1.0 ['ENSG00000136449|ENST00000323776|MYCBPAP', 'nc|ENSG00000136449|Q8TBZ2|MYCBPAP', 'MYCBPAP|p.E778Pfs*41|1|0.4|ENSG00000136449|chr17:50527311-50527312|-/ACCACAG|frameshift_variant'] 53553 7033 KRPLWTRMS True NCI_RA007_Epitope_Rep1 1173.6440823064102 1173.6429899358602 31.353 2 -1.0670451611509841 0.33674569665475806 1.0 ['ENST00000463625.6_1_9:37327797-37354732:+|nuORF'] 42586 13167 IEGADAETFSE True H1975_Epitope_Rep3 1167.4931630242302 1167.4920699358602 55.897 2 -1.0670689892833394 0.33674569665475806 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 36983 11792 GVNFAIAK True PC9_epitope_Rep5 818.46503823194 818.46394993586 50.355 2 -1.0671197495063158 0.33674569665475806 1.0 ['ENSG00000138375|ENST00000357276|SMARCAL1'] 121226 9680 VESYAECNIHT True H1975_Epitope_Rep1 1264.5394020239999 1264.53830993586 42.159 2 -1.0671309809736473 0.33674569665475806 1.0 ['ENST00000506130.5_1_5:72853376-72858450:-|nuORF'] 64474 19494 LPPYRYRFRRQ True NCI_RA007_Epitope_Rep2 1550.8582489363 1550.8571499358602 80.755 2 -1.0671748440945013 0.33674569665475806 1.0 ['CACNG3|p.R234Q|1|0.21|ENSG00000006116|chr16:24361616-24361616|G/A|missense_variant'] 42890 9038 IERHPVDI True PC9_epitope_Rep3 977.5294293936498 977.52832993586 39.707 2 -1.0671840494969973 0.33674569665475806 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'ENST00000588166.1_1_19:5135556-5138314:+|nuORF', 'KDM4B-AKAP8L|1|fusion'] 24618 18126 FAIPPSFASI True PC9_epitope_Rep1 1048.5593325396 1048.55822993586 74.513 2 -1.067208840128443 0.33675431303263353 1.0 ['nc|ENSG00000211899|P01871-1|IGHM', 'nc|ENSG00000211899|P01871|IGHM'] 4955 8112 ALGHPEGLPAP True H1975_Epitope_Rep1 1057.55564414149 1057.5545499358602 36.147 2 -1.0672284481030214 0.3367629291866402 1.0 ['ENST00000441698.6_1_8:9911977-10065409:+|nuORF', 'ENST00000317173.8_1_8:9911977-10102635:+|nuORF'] 135632 8390 WLLFWNVLFWK True PC9_epitope_Rep5 1550.8438276587801 1550.8421849037902 37.215 3 -1.0673508762791164 0.3368494894645223 1.0 ['nc|ENSG00000197858|O43292-2|GPAA1', 'ENSG00000197858|ENST00000355091|GPAA1', 'ENST00000530796.1_1_8:145140395-145141025:+|nuORF', 'ENST00000529638.1_1_8:145140125-145141025:+|nuORF'] 125670 24915 VKLLLPAAP True NCI_RA007_Epitope_Rep1 920.6058888091999 920.60478993586 103.12 2 -1.0674109055801488 0.33686234265598003 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000358849.8_1_7:150725553-150730697:+|nuORF', 'ENST00000297504.10_1_7:150725553-150728339:+|nuORF', 'ENST00000462605.5_1_7:150725553-150729984:+|nuORF', 'ENST00000461373.5_1_7:150725553-150725944:+|nuORF', 'ENST00000466514.5_1_7:150725553-150731828:+|nuORF'] 22539 3863 ETHIRVPA True PC9_epitope_Rep6 921.50321464581 921.50210993586 21.46 2 -1.06742674650509 0.33686234265598003 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 65686 7263 LSARFPAP True PC9_epitope_Rep2 857.4759372688098 857.47484993586 33.325 2 -1.0674404422428374 0.33686234265598003 1.0 ['ENST00000377113.5_1_10:21785785-21785953:-|nuORF'] 64509 19851 LPQVTSLPA True PC9_epitope_Rep4 924.5280324113199 924.52692993586 84.488 2 -1.067466775019412 0.33688394689667717 1.0 ['L1PB1_dup5315|chr6:117371060-117372034:+|1.924318660828955|0.1077496189140812|4.16|534.0|35|1|anti-sense'] 139468 22757 YLQRYHII True PC9_epitope_Rep1 1104.60801406752 1104.6069099358601 92.342 2 -1.0675178588855831 0.336892421998805 1.0 ['ENST00000513705.5_1_4:5205889-5347127:+|nuORF', 'STK32B|p.K265Rfs*22|1|0.32|ENSG00000152953|chr4:5460110-5460110|C/-|frameshift_variant', 'nc|ENSG00000152953|Q9NY57-2|STK32B', 'ENSG00000152953|ENST00000282908|STK32B'] 139618 15646 YLYRGPSAP True PC9_epitope_Rep3 1022.5185303567798 1022.5174299358599 65.329 2 -1.067520358891619 0.336892421998805 1.0 ['ENSG00000125492|ENST00000263610|BARHL1'] 87692 6612 QQWTYEQRKV True NCI_RA007_Epitope_Rep4 1364.6836981889196 1364.68260993586 32.061 2 -1.0675212527593663 0.336892421998805 1.0 ['ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENST00000466526.1_1_1:160147295-160152563:+|nuORF', 'nc|ENSG00000132681|Q13733-2|ATP1A4', 'ENSG00000132681|ENST00000368081|ATP1A4'] 139486 15551 YLRQKNIP True PC9_epitope_Rep2 1030.5923640033798 1030.59126993586 65.09 2 -1.0675250077105571 0.336892421998805 1.0 ['ENSG00000166840|ENST00000532726|GLYATL1', 'ENST00000534119.1_1_11:58715222-58723497:+|nuORF', 'nc|ENSG00000166840|Q969I3-2|GLYATL1'] 45904 8690 ISDYVTGNK True H1975_Epitope_Rep3 995.49237517859 995.49126993586 38.425 2 -1.0675497340662872 0.3369010352397158 1.0 ['nc|ENSG00000127870|Q9Y252-2|RNF6', 'ENSG00000127870|ENST00000381588|RNF6'] 33105 7308 GIQGQVLRP True NCI_RA007_Epitope_Rep1 966.5610638750999 966.55996993586 32.417 2 -1.0675927936911924 0.3369092302297492 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 11376 4621 DERDKKKRT True H1975_Epitope_Rep3 1174.6418333769398 1174.64017490379 22.897 3 -1.0676233993665871 0.3369092302297492 1.0 ['nc|ENSG00000261239|Q6NSI1|ANKRD26P1'] 102795 2620 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 14.327 2 -1.067635195675213 0.3369092302297492 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 9749 5619 AYHNLQGL True PC9_epitope_Rep6 914.4610154806599 914.45990993586 29.689 2 -1.0676493695096516 0.3369092302297492 1.0 ['ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 124415 10251 VGVFCAII True PC9_epitope_Rep2 820.4516966669198 820.45058993586 44.763 2 -1.0676760480603724 0.3369092302297492 1.0 ['ENSG00000085563|ENST00000622132|ABCB1', 'nc|ENSG00000085563|P08183-2|ABCB1'] 19181 11142 ELHRDACL True H1975_Epitope_Rep2 955.4545502012298 955.45344993586 47.894 2 -1.0676782144350485 0.3369092302297492 1.0 ['ENST00000464690.5_1_3:120129559-120169830:-|nuORF', 'nc|ENSG00000163430|Q12841-2|FSTL1', 'ENSG00000163430|ENST00000295633|FSTL1'] 31148 15017 GAVSYLHSL True PC9_epitope_Rep2 945.49198125577 945.49088993586 63.016 2 -1.0676841086402225 0.3369092302297492 1.0 ['nc|ENSG00000130822|Q6P2M8-5|PNCK', 'PNCK|p.G131W|1|0.29|ENSG00000130822|chrX:153671903-153671903|C/A|missense_variant', 'ENST00000488994.5_1_X:152936878-152938531:-|nuORF', 'nc|ENSG00000130822|Q6P2M8-3|PNCK', 'ENST00000466638.5_1_X:152936878-152938301:-|nuORF', 'ENST00000466074.5_1_X:152935914-152937529:-|nuORF', 'ENSG00000130822|ENST00000340888|PNCK', 'nc|ENSG00000130822|Q6P2M8-6|PNCK', 'nc|ENSG00000130822|Q6P2M8-2|PNCK'] 40249 9646 HQKCPQLGGPE True H1975_Epitope_Rep1 1192.5658915553597 1192.56478993586 42.032 2 -1.0677448879605902 0.3369092302297492 1.0 ['nc|ENSG00000187583|Q494U1-3|PLEKHN1', 'ENSG00000187583|ENST00000379410|PLEKHN1', 'nc|ENSG00000187583|Q494U1-2|PLEKHN1'] 37330 13371 GVSEERIHL True PC9_epitope_Rep5 1038.5458077337798 1038.54470993586 56.448 2 -1.0677823523424594 0.3369092302297492 1.0 ['nc|ENSG00000149636|Q9H410-4|DSN1', 'ENSG00000149636|ENST00000373750|DSN1'] 135797 16873 WNDILERCL True PC9_epitope_Rep4 1160.5648289261999 1160.56318490379 72.883 3 -1.067799365154974 0.3369092302297492 1.0 ['ENST00000265085.9_1_5:173371996-173372116:+|nuORF'] 128516 5245 VPSSHSVPSA True H1975_Epitope_Rep2 966.4770594676199 966.47596993586 25.241 2 -1.067931644011503 0.3369654151352615 1.0 ['ENST00000480273.5_1_20:62318929-62319157:+|nuORF'] 20667 18351 EQAQQIRLQAE True PC9_epitope_Rep4 1312.6735274280397 1312.67242993586 78.653 2 -1.0679334859393832 0.3369654151352615 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 30097 9972 FYKLRKRKR True NCI_RA007_Epitope_Rep4 1293.8145932191699 1293.8129549037901 45.2 3 -1.0679553706354057 0.336987012987013 1.0 ['ENST00000331314.10_1_1:200635381-200635528:-|nuORF'] 13673 19382 DPRIAQKIKR True NCI_RA007_Epitope_Rep5 1223.74623887583 1223.7451499358601 81.439 2 -1.0679834338888516 0.3369954807542465 1.0 ['ENSG00000124177|ENST00000373233|CHD6', 'nc|ENSG00000124177|Q8TD26-3|CHD6', 'ENST00000373222.3_1_20:40125942-40126167:-|nuORF', 'ENST00000470470.1_1_20:40125942-40143569:-|nuORF'] 87616 10211 QQQHQSSKKG True NCI_RA007_Epitope_Rep4 1154.57923312038 1154.57758490379 46.133 3 -1.0679932730178414 0.3369954807542465 1.0 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 64141 8928 LPETRKSIT True NCI_RA007_Epitope_Rep3 1043.59750895347 1043.59640993586 42.201 2 -1.0680431160456256 0.3369954807542465 1.0 ['ENST00000550513.1_1_12:53689756-53691495:+|nuORF'] 9651 11578 AYDWTPAVKF True PC9_epitope_Rep5 1196.5866099165999 1196.58496490379 49.529 3 -1.0680451620065299 0.3369954807542465 1.0 ['nc|ENSG00000241644|O95050-2|INMT', 'ENSG00000241644|ENST00000013222|INMT'] 113198 15062 TLQEERYRYER True NCI_RA007_Epitope_Rep2 1541.7586540343298 1541.7575499358602 63.274 2 -1.0680774620597742 0.3370040906434647 1.0 ['ENSG00000057704|ENST00000261226|TMCC3'] 52976 17105 KPGRHSVRIT True H1975_Epitope_Rep2 1149.6730739355698 1149.67196993586 71.068 2 -1.068127369024602 0.33703867231124846 1.0 ['ENST00000585917.5_1_19:28284461-28284521:+|nuORF'] 74090 8279 NDRGSVFP True NCI_RA007_Epitope_Rep1 890.4246299719399 890.42352993586 36.203 2 -1.068177460027858 0.33705589029711197 1.0 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 44885 17005 INLAGNPLEDR True NCI_RA007_Epitope_Rep1 1210.6305999869 1210.6295099358601 70.272 2 -1.0681990612508814 0.33705589029711197 1.0 ['nc|ENSG00000079691|Q5VZK9-2|CARMIL1', 'ENSG00000079691|ENST00000329474|CARMIL1', 'ENST00000497227.1_1_6:25466074-25472787:+|nuORF', 'nc|ENSG00000079691|Q5VZK9-4|CARMIL1', 'nc|ENSG00000079691|Q5VZK9-3|CARMIL1'] 43581 9448 IGSNYPEK True H1975_Epitope_Rep1 906.4446967101799 906.44358993586 41.257 2 -1.0682134847972826 0.3370731073886508 1.0 ['RBBP6|p.K1514Qfs*47|1|0.17|ENSG00000122257|chr16:24571602-24571605|AAAT/-|frameshift_variant', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'RBBP6|p.S1688Afs*100|1|0.35|ENSG00000122257|chr16:24572127-24572127|A/-|frameshift_variant', 'ENSG00000122257|ENST00000319715|RBBP6'] 118877 9999 VACFRMAP True PC9_epitope_Rep1 893.4251646492498 893.42406993586 43.327 2 -1.0682183247691512 0.3370731073886508 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.A3598G|1|0.22|ENSG00000198626|chr1:237727154-237727154|C/G|missense_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 104572 5539 SQQRM[Oxidation]KMKTT True H1975_Epitope_Rep3 1253.6220269129296 1253.6209299358602 26.354 2 -1.068262447999969 0.33708171559907024 1.0 ['ENST00000491832.6_1_6:56955645-56989586:+|nuORF'] 102794 2556 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 13.985 2 -1.068288479066882 0.337103308575287 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 30561 12680 GAHACARA True H1975_Epitope_Rep2 755.34969120987 755.3491449679301 53.875 1 -1.068341830053953 0.3371161462052847 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 60411 7444 LGTVHIRTA True NCI_RA007_Epitope_Rep2 966.5610638751 966.55996993586 33.581 2 -1.0683722919336989 0.3371161462052847 1.0 ['ENST00000300006.8_2_16:15681261-15681480:+|nuORF'] 85362 19751 QETTWRIDTV True PC9_epitope_Rep5 1247.61461556959 1247.61350993586 81.017 2 -1.0683729094493528 0.3371161462052847 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 81362 8608 PLDEALQR True NCI_RA007_Epitope_Rep5 940.4977949121999 940.49668993586 39.787 2 -1.0683781305025886 0.33713336016723583 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.V4417M|1|0.22|ENSG00000178209|chr8:143916983-143916983|C/T|missense_variant'] 59608 10371 LFWKELGRRQH True NCI_RA007_Epitope_Rep3 1468.8051507342798 1468.8040499358601 47.854 2 -1.0683820495946728 0.33713336016723583 1.0 ['ENST00000412918.1_1_1:226844949-226862702:-|nuORF'] 57324 8614 LEAECRLRCPR True NCI_RA007_Epitope_Rep1 1344.6754590876799 1344.67436993586 37.507 2 -1.0685345066363843 0.3372025084719355 1.0 ['ENST00000528182.5_2_11:111957606-111959624:+|nuORF', 'ENST00000528048.5_2_11:111957606-111965694:+|nuORF'] 116693 6642 TVDAIQKKL True NCI_RA007_Epitope_Rep2 1014.60734536118 1014.60624993586 30.446 2 -1.0685404000937966 0.3372025084719355 1.0 ['DMD|p.I2620L|1|0.2|ENSG00000198947|chrX:31679389-31679389|T/G|missense_variant'] 61215 14243 LILQYDIRQK True PC9_epitope_Rep4 1288.7503211967598 1288.74922993586 62.691 2 -1.0686237102580245 0.33721111399636455 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000480125.1_1_X:24766454-24793337:+|nuORF'] 122566 17368 VGFCLLVC True PC9_epitope_Rep3 852.4237676669198 852.42266993586 71.977 2 -1.0686890966473295 0.33727165318549485 1.0 ['ENST00000378487.2_1_12:92813988-92814823:-|nuORF'] 123930 18309 VGRTRFLRA True NCI_RA007_Epitope_Rep5 1074.6410455312998 1074.64047496793 77.227 1 -1.0687294848187867 0.33728025758874086 1.0 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 45222 9936 IPSSSIPLG True NCI_RA007_Epitope_Rep5 869.4858332461699 869.48528496793 44.861 1 -1.06876092721322 0.33728886176856265 1.0 ['ENSG00000099917|ENST00000263205|MED15', 'ENST00000489651.5_1_22:20929276-20940988:+|nuORF'] 80088 15557 PFLLSSEYDE True PC9_epitope_Rep2 1198.5393849406598 1198.5382899358601 65.112 2 -1.068851052612122 0.3373623805567096 1.0 ['ASTL|p.K111E|1|0.42|ENSG00000188886|chr2:96133971-96133971|T/C|missense_variant'] 42071 22281 IDKWEDRWEWL True PC9_epitope_Rep1 1574.7517777487396 1574.75068993586 90.515 2 -1.0689612661424162 0.337418534001506 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF'] 101844 11819 SLPKAHTVP True PC9_epitope_Rep4 948.53926580136 948.53816993586 53.23 2 -1.0689796556920466 0.337418534001506 1.0 ['ENSG00000268964|ENST00000601417|ERVV-2'] 69928 20318 LVKEQNGVQL True PC9_epitope_Rep5 1126.6346227381798 1126.63352993586 83.193 2 -1.069231270284395 0.33753099562491073 1.0 ['ENSG00000142319|ENST00000270349|SLC6A3'] 75260 7748 NIFMEYYRKFP True H1975_Epitope_Rep1 1506.7329568804598 1506.73132490379 34.762 3 -1.0694306290733395 0.3375915251596822 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 59093 15447 LEWWKTGIAF True H1975_Epitope_Rep3 1249.6495445263297 1249.64844993586 64.832 2 -1.069537375080403 0.33761732289597696 1.0 ['ENSG00000164023|ENST00000690982|SGMS2'] 126753 25872 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 104.63 3 -1.0695423052067885 0.33761732289597696 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 106552 15206 STMGGGRQVP True PC9_epitope_Rep3 988.4760139218 988.47490993586 63.636 2 -1.0695491090703635 0.33761732289597696 1.0 ['nc|ENSG00000106078|O75128-7|COBL', 'nc|ENSG00000106078|O75128-2|COBL'] 102755 12407 SNDLRAFVFE True NCI_RA007_Epitope_Rep1 1196.5825871653199 1196.5814899358602 52.235 2 -1.0695678805735431 0.33762592169488004 1.0 ['ENSG00000198887|ENST00000361138|SMC5'] 33084 5271 GIPAEYAP True NCI_RA007_Epitope_Rep5 816.4017692690398 816.40066993586 26.971 2 -1.0696511252332386 0.3376345202705334 1.0 ['nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 89971 11603 RDGDRLWYENP True PC9_epitope_Rep1 1419.6531263366296 1419.6520299358601 49.51 2 -1.069664286347417 0.3376387356396443 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 66174 6711 LSEQQYNR True NCI_RA007_Epitope_Rep3 1036.49377216092 1036.49266993586 33.483 2 -1.0696662945044542 0.3376387356396443 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'ENST00000493587.1_1_8:100883622-100887891:+|nuORF'] 13353 19187 DLVYTDRNF True PC9_epitope_Rep3 1141.54038800017 1141.53928993586 79.021 2 -1.069806325207753 0.33765593156535173 1.0 ['HFM1|p.L293V|1|0.26|ENSG00000162669|chr1:91380233-91380233|G/C|missense_variant'] 49554 18137 KFLKKLNHREL True PC9_epitope_Rep4 1424.86160298124 1424.8599449037902 77.828 3 -1.0698077664441052 0.33765593156535173 1.0 ['ENST00000377325.1_1_6:28056349-28056487:+|nuORF'] 59205 23693 LFDYLNRYIVT True H1975_Epitope_Rep1 1415.74490146315 1415.74380993586 98.368 2 -1.069851367949216 0.3376645291933851 1.0 ['TGFBR1|p.T296I|1|0.06|ENSG00000106799|chr9:99142617-99142617|C/T|missense_variant'] 122600 24851 VGFKISKVIV True NCI_RA007_Epitope_Rep1 1088.6957664427598 1088.69466993586 102.87 2 -1.0699195004739472 0.3376861070366957 1.0 ['nc|ENSG00000109113|Q9BZG1-2|RAB34', 'ENSG00000109113|ENST00000395245|RAB34'] 96815 7245 SAQTHFAA True PC9_epitope_Rep6 831.3875161872298 831.38640993586 36.992 2 -1.0700090468727614 0.3377033008398126 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 23595 16846 EWDAFDLKTK True NCI_RA007_Epitope_Rep2 1251.6135529404298 1251.61244993586 70.261 2 -1.0700486036343768 0.3377033008398126 1.0 ['ENST00000460138.5_1_6:7882234-7882414:-|nuORF'] 37554 5724 GVVLFSPFPE True H1975_Epitope_Rep3 1090.5698972233 1090.5688099358601 27.046 2 -1.0700913000640868 0.3377118974066094 1.0 ['ENST00000490691.1_1_3:4345355-4357899:+|nuORF'] 39560 11216 HLGLAQKV True PC9_epitope_Rep3 864.5181364339601 864.51702993586 48.151 2 -1.0701202762390423 0.33773347351479044 1.0 ['ENST00000503185.5_1_4:774291-774366:-|nuORF'] 112510 12395 TLDQSAALSP True PC9_epitope_Rep6 1001.5029398622898 1001.50184993586 59.091 2 -1.0701828162693887 0.3377550490628732 1.0 ['ENST00000259523.10_1_8:128747712-128748060:+|nuORF'] 110730 5850 TGGAGSKW True PC9_epitope_Rep1 762.36605246666 762.36494993586 27.316 2 -1.0702143524333951 0.3377766240508794 1.0 ['nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT', 'nc|ENSG00000198221|Q9Y6Z5|AFDN-DT'] 107487 21665 SVMVTGGP True PC9_epitope_Rep2 746.3632755853399 746.36272496793 88.811 1 -1.0703663354409512 0.3378587096188041 1.0 ['ENST00000511979.1_1_5:138723708-138724322:-|nuORF', 'nc|ENSG00000170476|Q8WU39-3|MZB1', 'ENST00000417694.6_1_5:138723456-138724322:-|nuORF', 'ENST00000503481.5_1_5:138723456-138725442:-|nuORF', 'ENSG00000170476|ENST00000302125|MZB1'] 130309 8156 VSHYRLFP True NCI_RA007_Epitope_Rep3 1017.5396001545299 1017.53850993586 39.195 2 -1.0704083788237346 0.3378587096188041 1.0 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant', 'PIGT|p.R83Tfs*40|1|0.2|ENSG00000124155|chr20:45416573-45416574|-/T|frameshift_variant'] 131473 23255 VTKARLTDK True PC9_epitope_Rep3 1030.61349337078 1030.6123899358602 94.727 2 -1.0704548871077124 0.3378802824213477 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 124555 21389 VGVPTRAR True PC9_epitope_Rep6 854.5086343794198 854.50808496793 95.147 1 -1.0705120971645492 0.3379535897835228 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 85456 1035 QFDHSDSDD True NCI_RA007_Epitope_Rep1 1064.36829686428 1064.36718993586 5.4694 2 -1.0705696291403541 0.3379535897835228 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 703 8002 AAVDAGMAM-[Oxidation] True PC9_epitope_Rep5 851.35172530591 851.35062993586 35.718 2 -1.070573876670311 0.3379535897835228 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 65474 25212 LRKSTFKNAK True H1975_Epitope_Rep1 1191.7087907379498 1191.70714490379 104.41 3 -1.0706288065501472 0.3379535897835228 1.0 ['nc|ENSG00000173083|Q9Y251-4|HPSE', 'nc|ENSG00000173083|Q9Y251-3|HPSE', 'nc|ENSG00000173083|Q9Y251-2|HPSE', 'ENSG00000173083|ENST00000311412|HPSE'] 22038 5926 ESLERQLKHPK True NCI_RA007_Epitope_Rep1 1363.7571974823497 1363.75555490379 27.098 3 -1.0706467651992417 0.3379621818748134 1.0 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'UBA6|p.Y611Tfs*17|1|0.45|ENSG00000033178|chr4:67635464-67635464|A/-|frameshift_variant', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 112556 7615 TLEERIEFSEL True H1975_Epitope_Rep1 1364.6823607762396 1364.6812699358602 34.28 2 -1.0707102763356646 0.33796620727244414 1.0 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 56552 10576 LDGPGERGPAP True PC9_epitope_Rep2 1064.5250722892 1064.5239699358601 45.998 2 -1.070711817597841 0.33796620727244414 1.0 ['ENST00000576921.1_1_16:3073505-3073679:-|nuORF'] 45103 20294 IPLIERLQRN True NCI_RA007_Epitope_Rep2 1250.7459045226599 1250.74426490379 83.97 3 -1.0707224018613337 0.33796620727244414 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 130530 10084 VSQTPVIS True H1975_Epitope_Rep1 829.4545331178899 829.4539849679301 43.724 1 -1.0707425404508162 0.33796620727244414 1.0 ['BRD3|p.A197S|1|0.45|ENSG00000169925|chr9:134050499-134050499|C/A|missense_variant'] 101994 8865 SLQPAPAS True PC9_epitope_Rep4 769.39701824177 769.39592993586 41.63 2 -1.0707500401348262 0.33796620727244414 1.0 ['nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 84278 6963 PYPGLSTVP True H1975_Epitope_Rep3 929.48583324617 929.48472993586 31.744 2 -1.070772328326188 0.3379877756005139 1.0 ['ENSG00000171872|ENST00000372299|KLF17', 'KLF17|p.V336Yfs*18|1|0.26|ENSG00000171872|chr1:44130590-44130590|G/-|frameshift_variant'] 40629 11876 HRLRLFLDVEV True H1975_Epitope_Rep3 1395.7986683715103 1395.79756993586 50.831 2 -1.070871241432036 0.3380093433688035 1.0 ['ENSG00000144589|ENST00000456909|STK11IP'] 78036 9252 NVSVEIMVPNS True NCI_RA007_Epitope_Rep2 1187.58562394043 1187.58452993586 40.597 2 -1.0709717812946846 0.33803950066180477 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 17198 7174 EGTINVHDVET True NCI_RA007_Epitope_Rep1 1212.56224564356 1212.5611499358602 31.894 2 -1.0710055827884153 0.33803950066180477 1.0 ['nc|ENSG00000185499|P15941-2|MUC1', 'nc|ENSG00000185499|P15941-17|MUC1', 'nc|ENSG00000185499|P15941|MUC1', 'nc|ENSG00000185499|P15941-3|MUC1', 'nc|ENSG00000185499|P15941-4|MUC1', 'ENSG00000185499|ENST00000620103|MUC1', 'nc|ENSG00000185499|P15941-8|MUC1', 'nc|ENSG00000185499|P15941-11|MUC1', 'nc|ENSG00000185499|P15941-7|MUC1', 'ENST00000468978.2_1_1:155159604-155160306:-|nuORF', 'nc|ENSG00000185499|P15941-6|MUC1', 'nc|ENSG00000185499|P15941-15|MUC1', 'nc|ENSG00000185499|P15941-13|MUC1'] 16863 11156 EFFHCMFEEM True NCI_RA007_Epitope_Rep3 1348.4926521557197 1348.4915499358601 50.989 2 -1.0710754410713308 0.33806965638949443 1.0 ['nc|ENSG00000138642|Q8IVU3-2|HERC6', 'ENSG00000138642|ENST00000264346|HERC6'] 62147 5078 LLEIMSTCSSK True NCI_RA007_Epitope_Rep2 1210.5937460959801 1210.5926499358602 24.377 2 -1.0710886768489079 0.33806965638949443 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 14065 12311 DRPRDWYRRMF True NCI_RA007_Epitope_Rep1 1596.7731989829997 1596.77210993586 51.858 2 -1.0711882726944153 0.3381171738143126 1.0 ['ENST00000523402.5_1_8:22411983-22419017:+|nuORF', 'ENST00000517535.5_1_8:22411983-22423386:+|nuORF', 'ENSG00000120896|ENST00000240123|SORBS3'] 119915 12921 VDLENVWLHFI True NCI_RA007_Epitope_Rep1 1383.7186867153098 1383.7175899358601 54.252 2 -1.0712167328769817 0.3381299631494265 1.0 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 79402 14784 PASWVQRRLR True H1975_Epitope_Rep3 1267.7261721375899 1267.7250699358601 62.246 2 -1.0712227491572066 0.3381299631494265 1.0 ['ENST00000450185.5_1_2:73228706-73298794:-|nuORF'] 124067 7338 VGSLAGIGEVM True H1975_Epitope_Rep3 1031.53213181559 1031.53102993586 33.202 2 -1.0712276581828721 0.3381299631494265 1.0 ['ENST00000420029.1_1_1:174726080-174726215:-|nuORF'] 123354 23397 VGLVRTMWRR True PC9_epitope_Rep5 1272.72372960944 1272.72317496793 94.977 1 -1.0712605462491507 0.3381385511684335 1.0 ['ENST00000443864.6_1_7:44664063-44684998:+|nuORF'] 31496 7520 GEAVVSAPSAP True H1975_Epitope_Rep2 983.4923751785899 983.49126993586 33.876 2 -1.0712912264700925 0.3381557265378677 1.0 ['ENST00000603475.1_1_9:90584039-90584273:-|nuORF'] 28232 22558 FRKGGGAC True PC9_epitope_Rep1 794.3857423654198 794.38464993586 91.574 2 -1.0713049173932747 0.3381557265378677 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33'] 64207 9662 LPGLKEFW True H1975_Epitope_Rep1 988.5382031721999 988.53710993586 42.09 2 -1.0713335815075122 0.3381685133767548 1.0 ['CON__Q3SZH5'] 88073 12550 QRRHHRRWREP True NCI_RA007_Epitope_Rep1 1612.8671909105597 1612.8660899358601 52.796 2 -1.0713341414589945 0.3381685133767548 1.0 ['ENSG00000132716|ENST00000368074|DCAF8'] 139653 23167 YMQGTQLTSI True PC9_epitope_Rep3 1140.5485101557201 1140.54685490379 94.382 3 -1.0713534791743404 0.3381685133767548 1.0 ['ENST00000531757.5_1_11:18354712-18357405:+|nuORF'] 126722 25091 VLPGKKKKKT True H1975_Epitope_Rep2 1125.75976368165 1125.75811490379 103.1 3 -1.0714253137052443 0.33817710022705155 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 63214 18181 LLSDSVPHTV True PC9_epitope_Rep2 1066.56587447202 1066.56476993586 75.239 2 -1.0714734918370226 0.3381942732592083 1.0 ['ENST00000567704.5_1_15:78187063-78188741:+|nuORF'] 128103 18429 VPLGRLELL True PC9_epitope_Rep4 1008.6331661861999 1008.63206993586 78.956 2 -1.0714737576690665 0.3381942732592083 1.0 ['ENSG00000136444|ENST00000258955|RSAD1'] 123132 8085 VGKPLNLD True NCI_RA007_Epitope_Rep3 854.48616759934 854.48506993586 38.899 2 -1.0714912408368027 0.33820285944108563 1.0 ['ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 34775 14046 GQGDERDMQL True PC9_epitope_Rep1 1147.49278618475 1147.4916899358602 58.865 2 -1.0715529355868585 0.338276313911701 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000556474.1_1_14:31672823-31675142:-|nuORF'] 65928 9235 LSDRVYLK True H1975_Epitope_Rep1 992.5654805491998 992.56438993586 40.432 2 -1.0715789894000047 0.33829329043640705 1.0 ['ENSG00000257594|ENST00000529983|GALNT4'] 10514 22087 CKYQIEVLTS True NCI_RA007_Epitope_Rep5 1182.5954603481398 1182.59380490379 92.086 3 -1.0716009399346191 0.33829329043640705 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 29880 5964 FVTSRQDGHPL True NCI_RA007_Epitope_Rep4 1255.6309343400699 1255.62982993586 29.559 2 -1.0716210386722753 0.33829329043640705 1.0 ['ENST00000521182.5_1_8:144099987-144102784:+|nuORF'] 102792 2242 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 12.239 2 -1.0716236626980336 0.33829329043640705 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 83102 11444 PSPLPRKVP True PC9_epitope_Rep2 989.6022004110899 989.60110993586 49.34 2 -1.0716298908845663 0.33829329043640705 1.0 ['ENST00000321153.8_1_11:809678-809873:+|nuORF'] 39564 15669 HLGPTQDSRW True PC9_epitope_Rep5 1195.57341946395 1195.5723299358601 65.283 2 -1.0716716299371685 0.33832781993902833 1.0 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF', 'ENST00000484411.1_1_10:77163655-77167299:+|nuORF', 'ENST00000425916.4_1_10:77163018-77167299:+|nuORF'] 103083 12272 SPGSSQCL True H1975_Epitope_Rep3 777.33270373305 777.33215496793 52.382 1 -1.0716841936209889 0.3383364034973925 1.0 ['nc|ENSG00000167302|Q96N21|TEPSIN', 'ENSG00000167302|ENST00000637944|TEPSIN', 'ENST00000574517.1_1_17:79210749-79211322:-|nuORF'] 122981 18491 VGHWAETLSL True PC9_epitope_Rep5 1111.56620882519 1111.5651099358602 76.149 2 -1.071748812852481 0.33834498683305875 1.0 ['ENSG00000198822|ENST00000361669|GRM3', 'GRM3|p.C585Vfs*11|1|0.31|ENSG00000198822|chr7:86839265-86839265|C/-|frameshift_variant'] 69047 8174 LTQLEADEEL True PC9_epitope_Rep1 1159.5608486612298 1159.55920490379 36.273 3 -1.071803570810971 0.3383577636528733 1.0 ['ENST00000468135.5_1_1:32542222-32557503:+|nuORF'] 65652 14356 LSALRVEEV True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 60.044 2 -1.071804498600926 0.3383577636528733 1.0 ['nc|ENSG00000012048|P38398-6|BRCA1', 'nc|ENSG00000012048|P38398-5|BRCA1', 'nc|ENSG00000012048|P38398-3|BRCA1', 'ENSG00000012048|ENST00000357654|BRCA1', 'nc|ENSG00000012048|P38398-7|BRCA1', 'ENST00000493795.5_1_17:41276035-41277334:-|nuORF', 'nc|ENSG00000012048|P38398-2|BRCA1'] 126961 15081 VLRLVVPRRP True PC9_epitope_Rep2 1203.7927951454299 1203.7911449037902 63.267 3 -1.071817612577163 0.3383577636528733 1.0 ['ENST00000462833.5_1_3:123167964-123168408:-|nuORF'] 123010 19469 VGIHLLKVLGP True PC9_epitope_Rep5 1144.73321458064 1144.73155490379 79.94 3 -1.0718315529223912 0.3383619571421159 1.0 ['ENST00000573175.1_1_17:4451225-4453465:-|nuORF'] 111714 10916 TIGGVKIYFPY True H1975_Epitope_Rep3 1256.68051030144 1256.6794099358601 47.075 2 -1.0718411524192917 0.3383619571421159 1.0 ['BRIP1|p.V457Cfs*6|1|0.28|ENSG00000136492|chr17:61793701-61793702|-/A|frameshift_variant', 'nc|ENSG00000136492|Q9BX63-2|BRIP1', 'ENSG00000136492|ENST00000259008|BRIP1'] 76071 25854 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 109.1 3 -1.0719140375500313 0.33839209276986537 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 30637 8454 GAKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 42.216 3 -1.0719221575973519 0.33839209276986537 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 38347 11722 HEIELRMR True PC9_epitope_Rep5 1082.56549763254 1082.56440993586 50.087 2 -1.0719310048929722 0.3383962851509806 1.0 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 112270 10511 TKRPPVLQ True PC9_epitope_Rep2 937.5709002828098 937.56980993586 45.753 2 -1.0719351616345367 0.3383962851509806 1.0 ['ENST00000574864.1_1_6:137221518-137222013:-|nuORF'] 61097 12115 LIICNAIIDPL True H1975_Epitope_Rep3 1196.6838814297198 1196.68278993586 51.765 2 -1.0720091803032803 0.3384134478196581 1.0 ['ENSG00000258839|ENST00000555147|MC1R'] 105551 24723 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 106.91 2 -1.0720101075745885 0.3384134478196581 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 96784 12522 SAPVPQTPL True PC9_epitope_Rep6 908.4967322830399 908.49562993586 59.6 2 -1.0720499263007737 0.33841744160408804 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'nc|ENSG00000141449|Q9C091-4|GREB1L', 'ENST00000578368.5_1_18:18963479-19048745:+|nuORF', 'ENST00000584446.5_1_18:18963479-19034595:+|nuORF'] 16527 4374 EELMIEFYDQN True H1975_Epitope_Rep3 1429.6071472306498 1429.60604993586 21.945 2 -1.0720547968225762 0.33841744160408804 1.0 ['SNX14|p.F372Lfs*45|1|0.19|ENSG00000135317|chr6:85543753-85543753|A/-|frameshift_variant'] 36824 12687 GVLGALTEMC True NCI_RA007_Epitope_Rep3 992.4670890308801 992.46598993586 57.147 2 -1.072057977181754 0.33841744160408804 1.0 ['ENST00000450638.5_2_22:31003348-31006244:+|nuORF', 'nc|ENSG00000185339|P20062-2|TCN2', 'ENSG00000185339|ENST00000215838|TCN2'] 10515 21812 CKYQIEVLTS True PC9_epitope_Rep6 1182.5954603481398 1182.59380490379 96.801 3 -1.0720619132678233 0.33841744160408804 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 109691 10661 TEDDIIWR True PC9_epitope_Rep5 1046.50327421546 1046.5021699358601 45.996 2 -1.0720964197476917 0.33841744160408804 1.0 ['ENSG00000065615|ENST00000369681|CYB5R4'] 44015 21492 IIHLRRHS True PC9_epitope_Rep6 1030.61483078346 1030.6137299358602 95.542 2 -1.0721093637466372 0.33842602199626476 1.0 ['ENSG00000186448|ENST00000344387|ZNF197'] 129153 23908 VQRLWQRPWLR True PC9_epitope_Rep5 1536.8789843808797 1536.8778899358601 96.942 2 -1.0721729409947247 0.33848647947603916 1.0 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 138998 24994 YKSKKDLKQK True H1975_Epitope_Rep2 1264.7503211967598 1264.74922993586 102.71 2 -1.072183673690649 0.3384950587502918 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 105554 24999 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 108.07 2 -1.0722072024866995 0.3384992478082689 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 117119 9021 TVKFVVKMTE True NCI_RA007_Epitope_Rep2 1180.6525813014398 1180.6514899358601 39.691 2 -1.0722199156485188 0.3384992478082689 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'TOP2B|p.K1573Rfs*37|1|0.1|ENSG00000077097|chr3:25598470-25598471|-/CTGTC|frameshift_variant', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B', 'TOP2B|p.Q1229Sfs*14|1|0.1|ENSG00000077097|chr3:25612616-25612616|G/-|frameshift_variant'] 69095 15609 LTRDRRHEVA True H1975_Epitope_Rep3 1251.67961586799 1251.6785099358601 65.456 2 -1.072248330308939 0.33852457953499226 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 20654 14101 EQAFRKRRQRA True NCI_RA007_Epitope_Rep1 1444.8123613730397 1444.81126993586 58.881 2 -1.072282479939653 0.33852457953499226 1.0 ['FOXK1|p.G401A|1|0.11|ENSG00000164916|chr7:4757145-4757145|G/C|missense_variant'] 128011 23362 VPIMELPT True NCI_RA007_Epitope_Rep4 898.4833907180199 898.48228993586 101.43 2 -1.0723167553484154 0.33852457953499226 1.0 ['ENSG00000130226|ENST00000377770|DPP6', 'nc|ENSG00000130226|P42658-2|DPP6'] 69750 18434 LVFLFFWWRRG True NCI_RA007_Epitope_Rep1 1525.83465995741 1525.8335699358602 75.842 2 -1.0723252915956198 0.33852457953499226 1.0 ['SVA_D_dup445|chr5:69514530-69516541:-|5.086170895852312|0.1334218778948128|5.25|538.0|20|2|sense'] 130966 9116 VTDLGIPR True PC9_epitope_Rep4 869.49706663621 869.49596993586 42.651 2 -1.0723299061836518 0.33852457953499226 1.0 ['ENSG00000197479|ENST00000354757|PCDHB11', 'nc|ENSG00000197479|Q9Y5F2-2|PCDHB11'] 84042 9312 PVVLAIRS True PC9_epitope_Rep6 853.53853752537 853.53744993586 45.986 2 -1.07238340803267 0.33852457953499226 1.0 ['ENSG00000137103|ENST00000643932|TMEM8B', 'nc|ENSG00000137103|A6NDV4|TMEM8B', 'nc|ENSG00000137103|A6NDV4-3|TMEM8B', 'nc|ENSG00000137103|A6NDV4-2|TMEM8B'] 5497 6022 ALYFYFHYLS True NCI_RA007_Epitope_Rep2 1322.63356010902 1322.6324699358602 28.033 2 -1.0724255074698863 0.33852457953499226 1.0 ['ENSG00000140832|ENST00000268485|MARVELD3'] 66360 5762 LSGFQHLQQ True NCI_RA007_Epitope_Rep4 1056.53524305008 1056.5341499358601 28.784 2 -1.0724294995157568 0.33852457953499226 1.0 ['ENST00000199814.8_1_5:150078125-150080602:-|nuORF'] 122209 16331 VGAPARRG True H1975_Epitope_Rep1 782.4511195032999 782.45057496793 68.174 1 -1.0724547054682865 0.33852457953499226 1.0 ['ENST00000578528.1_1_18:47018505-47018613:-|nuORF'] 10862 4028 CVNSKEPEVLL True NCI_RA007_Epitope_Rep4 1229.6325741328499 1229.63092490379 21.752 3 -1.0725023942103573 0.3385329547075375 1.0 ['ENSG00000136859|ENST00000373425|ANGPTL2'] 59432 21624 LFNLLSRCLE True PC9_epitope_Rep5 1206.6430792469002 1206.64198993586 88.218 2 -1.0725140799734387 0.3385329547075375 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 15744 5958 ECGIAYGDK True NCI_RA007_Epitope_Rep2 954.4116823297398 954.41058993586 27.785 2 -1.0725276891962032 0.3385329547075375 1.0 ['ENSG00000141458|ENST00000269228|NPC1'] 98464 13683 SFHKFHYL True PC9_epitope_Rep1 1077.53960015453 1077.53850993586 57.485 2 -1.0725502851983952 0.3385329547075375 1.0 ['ENST00000479107.1_1_6:33036772-33037066:-|nuORF', 'ENSG00000231389|ENST00000419277|HLA-DPA1'] 94200 1712 RRPMLWPLW True PC9_epitope_Rep5 1253.6855531955698 1253.68390490379 9.4887 3 -1.0725785646224049 0.33854153159928424 1.0 ['ENST00000532433.5_1_1:212965321-212969949:+|nuORF', 'ENST00000366974.8_1_1:212965321-212970536:+|nuORF'] 127714 23205 VPAPPAALAA True PC9_epitope_Rep6 876.5069030439199 876.5063549679301 102.36 1 -1.0725913594215977 0.33854571858306104 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 69185 5174 LTSEKDPL True PC9_epitope_Rep1 901.4756624852898 901.47456993586 24.754 2 -1.0725993128846152 0.33854571858306104 1.0 ['ENSG00000204406|ENST00000642680|MBD5', 'nc|ENSG00000204406|Q9P267|MBD5', 'nc|ENSG00000204406|Q9P267-2|MBD5'] 91511 19940 RHWQWWRVFTK True NCI_RA007_Epitope_Rep1 1628.8476842526 1628.84658993586 81.766 2 -1.0726472295344012 0.3386061588330632 1.0 ['nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 84505 6689 QAMRWDQASDR True NCI_RA007_Epitope_Rep5 1362.6098816256597 1362.6087899358602 32.399 2 -1.0727538255703903 0.33866659751575345 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 106864 4477 SVCCVEEEEEE True PC9_epitope_Rep5 1283.45334901119 1283.4522499358602 22.287 2 -1.0728006142514699 0.338701103374953 1.0 ['ENSG00000185614|ENST00000333323|INKA1', 'nc|ENSG00000185614|Q96EL1|INKA1'] 80340 6874 PGGGRWLPAG True PC9_epitope_Rep5 966.5035489989798 966.50244993586 31.411 2 -1.0728495937719928 0.3387096774193548 1.0 ['ENST00000282096.8_1_11:14665308-14793517:+|nuORF'] 44688 14772 ILTISIEMSAV True PC9_epitope_Rep4 1175.6471615678302 1175.6460699358602 64.753 2 -1.0728804626974553 0.3387268248411772 1.0 ['KIF17|p.F214L|1|0.14|ENSG00000117245|chr1:20709667-20709667|G/T|missense_variant'] 12222 13601 DIIEYFRWNW True H1975_Epitope_Rep1 1440.6826355597598 1440.68152993586 57.445 2 -1.0729117271890176 0.3387268248411772 1.0 ['ENSG00000036828|ENST00000639785|CASR', 'nc|ENSG00000036828|P41180-2|CASR'] 93839 22317 RRCRCRRRRRR True H1975_Epitope_Rep1 1628.9389334655198 1628.93782993586 92.852 2 -1.0729361626142173 0.3387310065861121 1.0 ['ENST00000583932.1_1_17:56065528-56065615:-|nuORF', 'ENST00000337565.9_1_2:111878510-111881339:+|nuORF'] 119859 27024 VDFLLLRVHIL True PC9_epitope_Rep1 1336.8230922142 1336.82198993586 110.16 2 -1.0729558265141375 0.3387310065861121 1.0 ['ENST00000409785.8_1_2:85273293-85273398:+|nuORF'] 62329 14636 LLGFLVMP True PC9_epitope_Rep4 888.51429692348 888.5131899358599 64.228 2 -1.0729826005627279 0.3387395796870341 1.0 ['ENSG00000102468|ENST00000542664|HTR2A'] 64190 11260 LPGIHVSA True PC9_epitope_Rep3 792.4493881678 792.44828993586 48.319 2 -1.073074966429353 0.3387870459200871 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 110869 13972 TGSAKHRL True NCI_RA007_Epitope_Rep4 868.4878989348399 868.48680993586 61.016 2 -1.0731290302756087 0.33884308234806054 1.0 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1'] 540 7985 AAPSHEVVVVV True PC9_epitope_Rep4 1105.6131590176099 1105.61206993586 38.161 2 -1.0731293742165544 0.33884308234806054 1.0 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 110564 7367 TFQLRDLSP True NCI_RA007_Epitope_Rep1 1075.56620882519 1075.5651099358602 32.65 2 -1.0731957554725318 0.33886879529161645 1.0 ['ENST00000482273.1_1_21:38269069-38269306:-|nuORF'] 56496 10383 LDFEKIMHTRK True NCI_RA007_Epitope_Rep1 1416.7547549541998 1416.75364993586 44.372 2 -1.0732000329952185 0.33886879529161645 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1'] 106025 26050 SSWNLLRLRR True PC9_epitope_Rep5 1299.7523868854298 1299.75073490379 105.8 3 -1.0732506065402891 0.33886879529161645 1.0 ['ENST00000008527.9_1_12:107486977-107487346:-|nuORF'] 83452 16534 PTPLGVHTLL True PC9_epitope_Rep2 1046.61243074162 1046.61132993586 68.837 2 -1.0732560840199843 0.33887736582836403 1.0 ['ENST00000263856.8_1_2:86732845-86732923:-|nuORF'] 59270 14118 LFFVPCIFTY True H1975_Epitope_Rep2 1248.6253039244398 1248.62420993586 59.459 2 -1.0733302277039578 0.33888154312825697 1.0 ['ENSG00000176547|ENST00000319856|OR4C3'] 60353 15308 LGSQRFLL True PC9_epitope_Rep4 932.5443511817999 932.54324993586 66.816 2 -1.0733324382954474 0.33888154312825697 1.0 ['ENST00000342879.7_1_19:35646325-35646499:+|nuORF'] 67873 2076 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 10.754 3 -1.0733818381573583 0.33890307610541465 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 32796 3972 GHFHGPWC True PC9_epitope_Rep5 939.3809913381499 939.37988993586 20.357 2 -1.0734278696228565 0.33893317778209864 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 43046 16143 IETYWYLWRFT True H1975_Epitope_Rep1 1576.7714505641597 1576.7703499358602 67.437 2 -1.0734357108110895 0.33893317778209864 1.0 ['ENSG00000198162|ENST00000356554|MAN1A2'] 13329 7922 DLVFISVLSNP True H1975_Epitope_Rep1 1202.65468947642 1202.65358993586 35.423 2 -1.0735095582509728 0.33894174681772227 1.0 ['nc|ENSG00000109814|O60701-2|UGDH'] 77258 8751 NRYRWLLI True NCI_RA007_Epitope_Rep5 1132.6505475858398 1132.64944993586 40.327 2 -1.0735358845323764 0.3389632778980388 1.0 ['ENST00000261667.7_1_13:50285049-50285109:-|nuORF'] 53257 13337 KQGKAVLL True NCI_RA007_Epitope_Rep4 855.5541875895099 855.55308993586 58.453 2 -1.0735515479344961 0.33896745259173805 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 102547 8045 SLVSREAVV True PC9_epitope_Rep4 958.5447451046199 958.54364993586 38.396 2 -1.0735649328066037 0.33896745259173805 1.0 ['ENSG00000113838|ENST00000338733|TBCCD1', 'nc|ENSG00000113838|Q9NVR7-2|TBCCD1'] 87677 8838 QQTYDMWLKK True H1975_Epitope_Rep3 1339.6594575870297 1339.65836993586 39.003 2 -1.0736027821622327 0.3389760207388205 1.0 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 67776 15519 LSYRWLHNEFP True NCI_RA007_Epitope_Rep1 1460.7200836976394 1460.71898993586 64.45 2 -1.0736659795686259 0.3390061177934467 1.0 ['CNTN2|p.L170H|1|0.66|ENSG00000184144|chr1:205059105-205059105|T/A|missense_variant'] 131491 21035 VTKKGSGS True PC9_epitope_Rep3 762.42356734278 762.42246993586 86.189 2 -1.0736882531584402 0.3390061177934467 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 75347 16994 NIRGSRFNP True PC9_epitope_Rep3 1059.55737547699 1059.5562699358602 70.527 2 -1.0737434096745018 0.339027646365015 1.0 ['PHKB|p.A639Qfs*7|1|0.4|ENSG00000102893|chr16:47650864-47650864|G/-|frameshift_variant', 'nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 7803 11184 ASVEKASFRAV True PC9_epitope_Rep5 1163.62987171091 1163.62822490379 48.008 3 -1.0738766624229632 0.3390878338971189 1.0 ['CUBN|p.T2323Hfs*11|1|0.33|ENSG00000107611|chr10:16918656-16918656|G/-|frameshift_variant', 'CUBN|p.A2835Pfs*18|1|0.16|ENSG00000107611|chr10:16899091-16899091|C/-|frameshift_variant', 'CUBN|p.H3198Tfs*23|1|0.09|ENSG00000107611|chr10:16851307-16851307|A/-|frameshift_variant', 'ENSG00000107611|ENST00000377833|CUBN', 'CUBN|p.S915Ffs*3|1|0.12|ENSG00000107611|chr10:17068652-17068653|-/A|frameshift_variant'] 9010 7826 AVGSANGVMYF True H1975_Epitope_Rep3 1114.51173072418 1114.5106299358602 35.081 2 -1.0739439546745868 0.3390878338971189 1.0 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 101920 8638 SLPVNQLYG True NCI_RA007_Epitope_Rep3 989.51819600361 989.51708993586 41.052 2 -1.0739515628781346 0.3390878338971189 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 2143 4264 AELPQKPP True H1975_Epitope_Rep2 878.4861675993399 878.48506993586 21.51 2 -1.0739560605610974 0.3390878338971189 1.0 ['nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ENSG00000153317|ENST00000518721|ASAP1'] 131490 21082 VTKKGSGS True PC9_epitope_Rep2 762.42356734278 762.42246993586 86.549 2 -1.0740432789887602 0.3391223204333964 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 113164 7915 TLPPVLPSGP True H1975_Epitope_Rep2 976.5593325396 976.55822993586 35.393 2 -1.0740837594932955 0.33915680607576565 1.0 ['ARHGEF40|p.E204V|1|0.27|ENSG00000165801|chr14:21074341-21074341|A/T|missense_variant'] 66752 7358 LSLLKDGA True PC9_epitope_Rep1 815.47526856247 815.47416993586 33.114 2 -1.0741107687023468 0.33918689493396925 1.0 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'ENST00000368464.7_1_6:121417353-121436400:-|nuORF', 'ENST00000464622.5_1_6:121401919-121436400:-|nuORF'] 11340 16241 DENADWKHSF True NCI_RA007_Epitope_Rep4 1247.52071518475 1247.5196099358602 70.432 2 -1.0741173954706666 0.33918689493396925 1.0 ['FSTL1|p.L213H|1|0.28|ENSG00000163430|chr3:120403298-120403298|A/T|missense_variant'] 80691 19517 PGVTGLAAAAL True PC9_epitope_Rep2 939.5389314481898 939.53782993586 80.456 2 -1.0741446772649548 0.33919939870670107 1.0 ['ENST00000316418.9_1_5:424040-432966:+|nuORF'] 66818 11510 LSMAELFDPL True PC9_epitope_Rep1 1134.5630975907 1134.56146490379 49.153 3 -1.0741474411215386 0.33919939870670107 1.0 ['ENST00000609281.1_1_7:105926092-105926272:+|nuORF'] 67592 14613 LSVDCTRI True PC9_epitope_Rep1 905.4640522557701 905.46294993586 61.032 2 -1.0741502429127092 0.33919939870670107 1.0 ['nc|ENSG00000093009|O75419-2|CDC45', 'ENSG00000093009|ENST00000263201|CDC45', 'nc|ENSG00000093009|O75419-3|CDC45'] 110557 3219 TFQDEMVLPR True NCI_RA007_Epitope_Rep2 1234.60160835774 1234.59997490379 17.172 3 -1.0741561316315205 0.33919939870670107 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 123692 5615 VGRAPKQA True PC9_epitope_Rep3 825.48208527841 825.48098993586 26.676 2 -1.0741618651222467 0.33919939870670107 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 54162 23920 KVRFLKLKK True NCI_RA007_Epitope_Rep4 1158.7964835435398 1158.79483490379 103.74 3 -1.0741781006145077 0.33919939870670107 1.0 ['nc|ENSG00000154258|Q8IUA7-4|ABCA9', 'nc|ENSG00000154258|Q8IUA7-3|ABCA9', 'ABCA9|p.G1473Afs*4|1|0.35|ENSG00000154258|chr17:68984137-68984137|C/-|frameshift_variant', 'ENSG00000154258|ENST00000340001|ABCA9'] 140424 17178 YRFWYPKWEMP True NCI_RA007_Epitope_Rep2 1601.7489412977698 1601.7478499358601 71.559 2 -1.0742598533136944 0.33926835905609765 1.0 ['nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2', 'nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2', 'ENSG00000180481|ENST00000550916|GLIPR1L2'] 117557 8487 TVSIATMPTHS True NCI_RA007_Epitope_Rep2 1143.55940919259 1143.55830993586 37.656 2 -1.0743170295162787 0.33926835905609765 1.0 ['nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'GRHL1|p.E527Rfs*18|1|0.16|ENSG00000134317|chr2:9995956-9995962|AAGAACC/-|frameshift_variant', 'ENSG00000134317|ENST00000324907|GRHL1', 'ENST00000497403.5_1_2:10101229-10104576:+|nuORF'] 53432 5374 KRCYWSYFVRS True NCI_RA007_Epitope_Rep1 1493.72378917909 1493.72215490379 24.983 3 -1.0743218503038126 0.33927252465304325 1.0 ['ENST00000369707.2_1_10:106037758-106039140:+|nuORF'] 70728 9417 LWRRRELWFWW True H1975_Epitope_Rep3 1732.9102845091595 1732.90864490379 41.225 3 -1.0745113120680942 0.33927252465304325 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 72249 11038 MHIPHSLA True PC9_epitope_Rep1 904.4589073056801 904.45780993586 47.345 2 -1.0745646038277943 0.33930700253978124 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 125619 4512 VKKPIIGILM True PC9_epitope_Rep1 1110.71987301562 1110.71876993586 22.236 2 -1.074603984047783 0.3393155637334301 1.0 ['GGH|p.A31V|1|0.38|ENSG00000137563|chr8:63038677-63038677|G/A|missense_variant'] 131186 8597 VTELLEEFSPV True NCI_RA007_Epitope_Rep2 1261.64418436237 1261.6430899358602 38.085 2 -1.0746472589946876 0.3393241247052116 1.0 ['ENSG00000101751|ENST00000579534|POLI'] 1247 6124 AEDFREPP True H1975_Epitope_Rep3 959.4348603024699 959.43376993586 28.568 2 -1.074756826251902 0.3393456430191124 1.0 ['ENSG00000143344|ENST00000360851|RGL1', 'nc|ENSG00000143344|Q9NZL6-2|RGL1'] 131471 24214 VTKARLTDK True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 97.955 2 -1.0747888894210773 0.33938011817145225 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 133661 12610 VYAPALAL True NCI_RA007_Epitope_Rep3 816.47454028648 816.47344993586 56.846 2 -1.0748327645989015 0.33941019461504573 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12', 'nc|ENSG00000148942|Q1EHB4-2|SLC5A12'] 68840 5569 LTLYFYYKFRT True NCI_RA007_Epitope_Rep3 1513.7969370360097 1513.79530490379 28.898 3 -1.0748871678890373 0.33941019461504573 1.0 ['ENSG00000040487|ENST00000375153|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-2|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-3|SLC66A1'] 44179 16555 IIWQIEERRRS True H1975_Epitope_Rep1 1484.8211947212399 1484.82008993586 69.054 2 -1.0749323094517416 0.3394317106985061 1.0 ['LRCH2|p.S550I|1|0.73|ENSG00000130224|chrX:115149873-115149873|C/A|missense_variant'] 80807 23428 PHLVQVRER True PC9_epitope_Rep1 1132.6465248345598 1132.6454299358602 94.9 2 -1.0751175470575112 0.33949601606529767 1.0 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 76096 652 NMQKARELWD True NCI_RA007_Epitope_Rep1 1289.61865540421 1289.61700490379 3.4455 3 -1.0751662960826442 0.33949601606529767 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 680 2622 AATTEKAKK True NCI_RA007_Epitope_Rep4 946.5447451046199 946.54364993586 14.708 2 -1.0751874075131749 0.33949601606529767 1.0 ['nc|ENSG00000170473|Q9BRP8-2|PYM1', 'ENSG00000170473|ENST00000408946|PYM1'] 119486 11704 VARRAAVS True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 51.672 2 -1.0751897074720438 0.33949601606529767 1.0 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'ENST00000484252.5_1_2:128398362-128399806:-|nuORF'] 86466 21075 QKRKKEKP True H1975_Epitope_Rep2 1040.6454622053998 1040.6443699358601 87.237 2 -1.0752019099573464 0.33949601606529767 1.0 ['ENSG00000152465|ENST00000378165|NMT2', 'ENST00000378150.1_1_10:15177331-15210611:-|nuORF'] 59354 18898 LFKRVKCIS True PC9_epitope_Rep6 1092.6477707045199 1092.64666993586 85.337 2 -1.0752150365101871 0.33949601606529767 1.0 ['ENSG00000205832|ENST00000444310|C16orf96'] 54246 13513 KWLQDLQEE True PC9_epitope_Rep6 1187.58225281215 1187.5811499358601 63.699 2 -1.0752598749223645 0.33953464269057365 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1', 'ENST00000555164.2_1_14:56119589-56122865:+|nuORF'] 60375 21620 LGTEIKPI True PC9_epitope_Rep1 869.5222187548899 869.52112993586 87.987 2 -1.0752741593055883 0.33953464269057365 1.0 ['ENSG00000110367|ENST00000534980|DDX6'] 103589 7013 SPSPRQLL True PC9_epitope_Rep4 896.50796567308 896.50686993586 34.222 2 -1.0753155152030378 0.33953464269057365 1.0 ['ENST00000389279.7_1_8:22462563-22463297:+|nuORF'] 81093 15536 PITVNRVTV True PC9_epitope_Rep5 997.59202965021 997.59092993586 64.769 2 -1.075351313817331 0.33954319916050213 1.0 ['ENST00000377415.3_9:70394269-70394752:-|nuORF'] 78005 13268 NVPFLWAWNAP True PC9_epitope_Rep2 1313.6556925359298 1313.65458993586 56.312 2 -1.0754028756818843 0.3395776655007125 1.0 ['ENSG00000106304|ENST00000682466|SPAM1', 'nc|ENSG00000106304|P38567-2|SPAM1'] 46473 9550 ISVEKGYNITM True H1975_Epitope_Rep3 1253.6325741328499 1253.6314699358602 41.742 2 -1.0754500611074391 0.3395862211915897 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'CSMD3|p.K2636*|1|0.27|ENSG00000164796|chr8:112306173-112306174|-/T|frameshift_variant', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.G3441Afs*4|1|0.37|ENSG00000164796|chr8:112244476-112244476|A/-|frameshift_variant', 'CSMD3|p.I3465Ffs*10|1|0.57|ENSG00000164796|chr8:112244404-112244404|G/-|frameshift_variant', 'CSMD3|p.Y3650Ffs*51|1|0.41|ENSG00000164796|chr8:112228771-112228771|T/-|frameshift_variant'] 102806 1645 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 9.199 2 -1.0755258916717463 0.33962068608145923 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 240 19570 AAGAPNLVLAA True PC9_epitope_Rep1 966.5498304850599 966.54928496793 80.101 1 -1.0756033449261588 0.33966370443298705 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 103810 16435 SPWDSHSRLW True PC9_epitope_Rep1 1269.58906952809 1269.58741490379 68.041 3 -1.0756098080385526 0.33966370443298705 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 80692 6387 PGVTPKPDR True NCI_RA007_Epitope_Rep3 965.5294293936499 965.52832993586 32.127 2 -1.075660575702234 0.3396722585659693 1.0 ['nc|ENSG00000171777|Q8TDF6-9|RASGRP4', 'nc|ENSG00000171777|Q8TDF6-6|RASGRP4', 'nc|ENSG00000171777|Q8TDF6-5|RASGRP4', 'nc|ENSG00000171777|Q8TDF6-7|RASGRP4', 'nc|ENSG00000171777|Q8TDF6-8|RASGRP4', 'ENST00000592322.5_1_19:38901850-38916815:-|nuORF', 'nc|ENSG00000171777|Q8TDF6-2|RASGRP4', 'ENSG00000171777|ENST00000615439|RASGRP4'] 71541 22593 MAKKVAVIG True PC9_epitope_Rep4 915.5575587177898 915.55646993586 95.136 2 -1.0756970667774335 0.3396937665163998 1.0 ['FMO4|p.S512Yfs*4|1|0.05|ENSG00000076258|chr1:171341697-171341697|C/-|frameshift_variant', 'ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF', 'ENST00000493513.1_1_1:171154462-171155083:+|nuORF', 'ENST00000462643.2_1_1:171154426-171162550:+|nuORF', 'ENST00000209929.9_1_1:171154426-171178089:+|nuORF', 'ENSG00000094963|ENST00000209929|FMO2'] 59673 8639 LGALLRQGGDP True H1975_Epitope_Rep1 1095.6036569630699 1095.60254993586 38.159 2 -1.0757126131068915 0.33970232003834344 1.0 ['nc|ENSG00000160117|Q8NAG6-1|ANKLE1', 'ENSG00000160117|ENST00000404085|ANKLE1', 'ENST00000404085.5_1_19:17392508-17397358:+|nuORF', 'ENST00000596099.1_1_19:17392905-17393816:+|nuORF', 'ENST00000596626.1_1_19:17392705-17393630:+|nuORF'] 127861 10826 VPFREMKPVI True PC9_epitope_Rep1 1214.68455013606 1214.68291490379 46.528 3 -1.0757260785402267 0.33971087333868755 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 68886 9701 LTNHLQKYR True PC9_epitope_Rep1 1171.6461904813898 1171.64455490379 42.172 3 -1.0758814730988888 0.33975828702444333 1.0 ['ENST00000426101.5_1_1:147887382-147892533:+|nuORF'] 7802 7983 ASVDVDLLAP True H1975_Epitope_Rep3 998.5284263341399 998.5273299358599 35.676 2 -1.0759638808805285 0.33979274611398963 1.0 ['ENSG00000129951|ENST00000520876|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-2|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-3|PLPPR3'] 60686 8773 LHNGLLAR True NCI_RA007_Epitope_Rep3 892.52428444356 892.52318993586 41.597 2 -1.0759751576195042 0.33980129791064884 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 13940 6150 DRAIDGLNL True PC9_epitope_Rep5 985.51925863277 985.51816993586 28.641 2 -1.0760541911009336 0.3398487085826792 1.0 ['ENSG00000141012|ENST00000268695|GALNS', 'ENST00000568613.5_1_16:88880849-88909575:-|nuORF'] 105884 22948 SSPRRRSR True PC9_epitope_Rep2 1000.56385783976 1000.56276993586 93.764 2 -1.0761326262154147 0.3398831651619756 1.0 ['ENST00000479849.1_1_21:46327920-46330539:-|nuORF'] 1689 6146 AEGGANKGYVQ True PC9_epitope_Rep2 1092.5199869087598 1092.5188899358602 29.033 2 -1.076239711248812 0.3399305735454122 1.0 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 62443 18586 LLHPPPLSL True PC9_epitope_Rep5 985.59605240149 985.59494993586 76.516 2 -1.076252061638661 0.33995207564276925 1.0 ['ENST00000583260.1_1_17:62009328-62009508:-|nuORF'] 39328 25453 HIVSLILG True PC9_epitope_Rep2 850.5276384885 850.52654993586 103.59 2 -1.076296309668045 0.3399559642533351 1.0 ['ENST00000336034.8_1_19:42703119-42703434:-|nuORF'] 23577 13752 EVYGRTYP True PC9_epitope_Rep5 983.4712458111899 983.47014993586 57.918 2 -1.0763585444268724 0.3399559642533351 1.0 ['ENSG00000135829|ENST00000367549|DHX9'] 42721 14286 IEKSWKRKFRT True H1975_Epitope_Rep1 1477.8517665735299 1477.8506699358602 60.137 2 -1.0763647549957045 0.3399559642533351 1.0 ['ENST00000487163.5_1_1:161131815-161133927:+|nuORF'] 133031 25092 VVPIEVLPTV True NCI_RA007_Epitope_Rep1 1064.648147544 1064.6470499358602 103.84 2 -1.076370746623537 0.3399559642533351 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 46402 10759 ISSIFHPWMMK True H1975_Epitope_Rep1 1375.6780848566298 1375.67698993586 46.347 2 -1.0763952114125872 0.3399559642533351 1.0 ['ENST00000300403.10_1_20:30345217-30345373:+|nuORF'] 13730 7005 DPYHGNQEKVP True H1975_Epitope_Rep1 1282.59421447818 1282.5931099358602 31.979 2 -1.0764724968400907 0.33998601253691135 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 84951 6664 QEEKTEMHKAR True H1975_Epitope_Rep1 1385.6721475290499 1385.67104993586 30.685 2 -1.0764780301122983 0.33998601253691135 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 69766 24968 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 104.58 3 -1.0765391709848715 0.3400287501456933 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 69304 6927 LTVDEGTMK True NCI_RA007_Epitope_Rep1 992.48484727 992.48374993586 30.949 2 -1.0765411612149058 0.3400287501456933 1.0 ['ENST00000565097.1_1_16:1872299-1876830:-|nuORF', 'ENST00000569700.5_1_16:1869077-1876788:-|nuORF', 'nc|ENSG00000063854|Q16775-3|HAGH', 'ENSG00000063854|ENST00000397356|HAGH'] 55312 6422 LAEAVRVPG True H1975_Epitope_Rep3 910.5236157372199 910.52250993586 29.68 2 -1.0766044084743016 0.3400287501456933 1.0 ['ENST00000430334.7_1_17:43555439-43559860:-|nuORF'] 79939 10845 PERRYFYWY True PC9_epitope_Rep5 1378.6458561282197 1378.64422490379 46.704 3 -1.076614286212889 0.3400287501456933 1.0 ['nc|ENSG00000078549|P41586-5|ADCYAP1R1', 'nc|ENSG00000078549|P41586-3|ADCYAP1R1', 'ENSG00000078549|ENST00000304166|ADCYAP1R1', 'nc|ENSG00000078549|P41586-4|ADCYAP1R1', 'nc|ENSG00000078549|P41586-2|ADCYAP1R1'] 63147 23528 LLRLHKEP True PC9_epitope_Rep1 1004.6130994479599 1004.61200993586 95.289 2 -1.0766514408925654 0.3400287501456933 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 138674 22521 YIKKFPLL True PC9_epitope_Rep3 1020.6371889374799 1020.63608993586 91.902 2 -1.0766871662607602 0.3400458436395188 1.0 ['ENST00000237186.10_1_6:83602743-83775466:-|nuORF', 'ENSG00000118420|ENST00000369747|UBE3D'] 103916 18819 SQALGPSPPLF True H1975_Epitope_Rep2 1112.5866099165999 1112.58550993586 78.142 2 -1.0767000621210467 0.3400458436395188 1.0 ['nc|ENSG00000116990|P12524-2|MYCL'] 37699 3465 GVYLFTEAYYY True NCI_RA007_Epitope_Rep2 1387.63361967867 1387.63198490379 18.136 3 -1.0767788922098505 0.34008029008029006 1.0 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 103435 2865 SPPRQQTPPL True NCI_RA007_Epitope_Rep1 1119.60365696307 1119.60254993586 14.968 2 -1.0768171567625429 0.34012768547415856 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3'] 84629 11354 QDEVLRDDP True H1975_Epitope_Rep1 1085.4989171110099 1085.4978299358602 48.65 2 -1.0769513722977493 0.340213928673176 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 20867 8892 EQLEKYHKQHK True H1975_Epitope_Rep1 1466.76301113878 1466.76190993586 39.11 2 -1.076987497671249 0.3402177994742771 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6', 'nc|ENSG00000115423|Q9C0G6-3|DNAH6', 'ENST00000476689.5_1_2:84775422-84811380:+|nuORF'] 26394 28180 FHYDWISIPL True H1975_Epitope_Rep2 1289.6444591458899 1289.64280490379 117.61 3 -1.0770179762075 0.3402177994742771 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 55565 12071 LAGVKKDI True PC9_epitope_Rep4 842.5225531080599 842.52144993586 54.237 2 -1.0770831579714897 0.3402177994742771 1.0 ['CDC7|p.G288Wfs*14|1|0.16|ENSG00000097046|chr1:91513981-91513982|-/T|frameshift_variant', 'CDC7|p.G288Efs*18|1|0.25|ENSG00000097046|chr1:91513987-91513987|G/-|frameshift_variant', 'ENSG00000097046|ENST00000234626|CDC7'] 46240 10715 ISNLRSEPPK True H1975_Epitope_Rep3 1139.62987171091 1139.6287699358602 46.291 2 -1.0770961465127324 0.3402177994742771 1.0 ['ENSG00000198173|ENST00000358047|FAM47C', 'FAM47C|p.H581Ifs*244|1|0.17|ENSG00000198173|chrX:37010149-37010149|C/-|frameshift_variant'] 100882 18341 SLESRLHFR True PC9_epitope_Rep1 1143.61489035311 1143.61378993586 75.336 2 -1.077101474911723 0.3402177994742771 1.0 ['nc|ENSG00000155158|Q5VTQ0-7|TTC39B', 'ENST00000380853.1_1_9:15172019-15185442:-|nuORF', 'nc|ENSG00000155158|Q5VTQ0-5|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-2|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-6|TTC39B', 'ENSG00000155158|ENST00000512701|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-3|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-4|TTC39B', 'nc|ENSG00000155158|Q5VTQ0|TTC39B'] 22620 8391 ETLSYLYKLSE True NCI_RA007_Epitope_Rep2 1344.68129814708 1344.6802099358601 37.279 2 -1.0771243926044 0.34023902319016974 1.0 ['MROH9|p.V514E|1|0.19|ENSG00000117501|chr1:170998219-170998219|T/A|missense_variant'] 26996 15807 FLENHYRELRR True PC9_epitope_Rep2 1531.8007936298297 1531.7996899358602 66.062 2 -1.07716885128085 0.34023902319016974 1.0 ['CON__Q2UVX4'] 15986 6254 EDRKNEDL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 29.453 2 -1.0771791106254467 0.34023902319016974 1.0 ['ENST00000517548.1_1_6:109409388-109415153:-|nuORF'] 33927 10434 GLRKIIVRVLL True PC9_epitope_Rep2 1278.8863611770998 1278.8847149037902 45.454 3 -1.077207674803849 0.34023902319016974 1.0 ['ENST00000464167.5_1_3:197676878-197677004:+|nuORF'] 133555 64 VWTELQDIHN True PC9_epitope_Rep2 1253.6040508858898 1253.6023949037901 0.36561 3 -1.07729803531473 0.3402472972098142 1.0 ['AFTPH|p.D710N|1|0.45|ENSG00000119844|chr2:64569132-64569132|G/A|missense_variant'] 91173 242 RGAGSKRKRR True PC9_epitope_Rep3 1170.71700443622 1170.71536490379 1.3655 3 -1.0773010052019865 0.3402472972098142 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 36940 10914 GVLTQKKP True PC9_epitope_Rep3 869.5334521449298 869.53234993586 46.963 2 -1.077378969550018 0.3402472972098142 1.0 ['ENSG00000183421|ENST00000332512|RIPK4', 'nc|ENSG00000183421|P57078|RIPK4'] 60666 15341 LHLQCRGEAAH True PC9_epitope_Rep3 1233.60367404641 1233.6020249037902 64.166 3 -1.077391489162035 0.3402472972098142 1.0 ['ENSG00000102755|ENST00000282397|FLT1', 'FLT1|p.V842Ffs*19|1|0.26|ENSG00000102755|chr13:28334094-28334094|C/-|frameshift_variant', 'nc|ENSG00000102755|P17948-4|FLT1', 'FLT1|p.S676Mfs*11|1|0.19|ENSG00000102755|chr13:28384974-28384975|-/AGCA|frameshift_variant', 'nc|ENSG00000102755|P17948-2|FLT1'] 16165 10689 EEDLRVANLKP True H1975_Epitope_Rep3 1282.68811486302 1282.68700993586 46.19 2 -1.0774325199093595 0.3402558392459475 1.0 ['ACE2|p.V670L|1|0.15|ENSG00000130234|chrX:15566359-15566359|C/A|missense_variant'] 46483 8297 ISVKVIDDEEY True NCI_RA007_Epitope_Rep1 1308.64491263836 1308.6438099358602 36.274 2 -1.0774519101228872 0.34025970663248795 1.0 ['SLC8A1|p.H824Tfs*8|1|0.29|ENSG00000183023|chr2:40139476-40139476|G/-|frameshift_variant', 'nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1'] 80886 21533 PHVPLEQRR True NCI_RA007_Epitope_Rep4 1130.63087477042 1130.6297699358602 93.352 2 -1.0774590843976106 0.34025970663248795 1.0 ['ENST00000579023.5_1_17:73127274-73127802:-|nuORF', 'nc|ENSG00000125458|Q8TCD5-2|NT5C', 'ENSG00000125458|ENST00000245552|NT5C', 'ENST00000583655.5_1_17:73127559-73127802:-|nuORF'] 122388 6851 VGDNRVVL True PC9_epitope_Rep4 870.4923156089399 870.49120993586 33.572 2 -1.0774621010016479 0.34025970663248795 1.0 ['ENSG00000117983|ENST00000529681|MUC5B'] 12977 23792 DLLPLSLIPV True PC9_epitope_Rep2 1078.66379760814 1078.6627099358602 96.988 2 -1.0774727852217816 0.34025970663248795 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2'] 132894 24657 VVLTPSVLTV True PC9_epitope_Rep4 1026.63249747986 1026.6314099358601 103.34 2 -1.0774758794813182 0.34025970663248795 1.0 ['ENST00000414082.1_3_20:33292571-33293222:+|nuORF'] 132893 25401 VVLTPSVLTV True PC9_epitope_Rep2 1026.63249747986 1026.6314099358601 103.39 2 -1.077490517706066 0.34028092433167195 1.0 ['ENST00000414082.1_3_20:33292571-33293222:+|nuORF'] 16112 10997 EEAIRHDVI True PC9_epitope_Rep4 1080.5563724174801 1080.55526993586 50.077 2 -1.077507551325818 0.34028092433167195 1.0 ['ENSG00000121892|ENST00000303538|PDS5A', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'PDS5A|p.Y488Ifs*12|1|0.11|ENSG00000121892|chr4:39902384-39902384|A/-|frameshift_variant', 'nc|ENSG00000083642|Q9NTI5-2|PDS5B', 'ENSG00000083642|ENST00000315596|PDS5B', 'nc|ENSG00000083642|Q9NTI5-3|PDS5B', 'ENST00000498550.5_1_13:33222909-33262824:+|nuORF'] 39330 9604 HIWNYFMHQEK True H1975_Epitope_Rep3 1531.7030537345097 1531.70194993586 41.955 2 -1.0775130665638089 0.34028092433167195 1.0 ['ENST00000505402.1_1_5:96031588-96050414:+|nuORF', 'ENST00000504221.5_1_5:96038575-96050414:+|nuORF'] 122708 5852 VGGGQKVR True PC9_epitope_Rep2 799.4664352142698 799.46532993586 27.908 2 -1.0775332289010477 0.34028092433167195 1.0 ['ENSG00000106397|ENST00000223127|PLOD3', 'ENST00000478082.5_1_7:100856177-100861250:-|nuORF'] 12438 10842 DIVSGSKLAV True PC9_epitope_Rep2 987.56006081559 987.55896993586 47.022 2 -1.0775607340457969 0.3402894648266577 1.0 ['DCDC1|p.V715Wfs*20|1|0.2|ENSG00000170959|chr11:30894319-30894319|C/-|frameshift_variant', 'DCDC1|p.M747Ifs*23|1|0.21|ENSG00000170959|chr11:30892971-30892972|-/A|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.K188Sfs*8|1|0.14|ENSG00000170959|chr11:30920827-30920827|T/-|frameshift_variant'] 16209 3925 EEEIRRFWKLR True NCI_RA007_Epitope_Rep2 1560.8524948495199 1560.85029987172 19.903 4 -1.077633054278261 0.3402935998342999 1.0 ['nc|ENSG00000148814|Q9C0I9-4|LRRC27', 'nc|ENSG00000148814|Q9C0I9-3|LRRC27', 'nc|ENSG00000148814|Q9C0I9-2|LRRC27', 'ENSG00000148814|ENST00000368614|LRRC27'] 62019 7190 LLDQHMLKVHY True NCI_RA007_Epitope_Rep2 1395.73329123363 1395.73218993586 32.588 2 -1.0776344038434795 0.3402935998342999 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A'] 39011 20542 HHQNEVINY True H1975_Epitope_Rep2 1152.5312202988 1152.52957490379 85.103 3 -1.0776468806408193 0.34030213983352536 1.0 ['ENSG00000163818|ENST00000296135|LZTFL1', 'ENST00000495864.5_1_3:45877080-45883504:-|nuORF', 'ENST00000480156.5_1_3:45874526-45883504:-|nuORF'] 61552 19940 LKHCLLKEVF True NCI_RA007_Epitope_Rep2 1228.7002002001998 1228.6991099358602 82.562 2 -1.0778372972999792 0.3403445642466055 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 123153 21040 VGKRNARA True PC9_epitope_Rep4 870.5147823890198 870.5142349679301 89.09 1 -1.0778442230132088 0.3403445642466055 1.0 ['ENST00000405731.7_1_7:6618146-6618326:+|nuORF', 'ENST00000396707.6_1_7:6617123-6618326:+|nuORF'] 67370 9992 LSSKAKAQ True PC9_epitope_Rep3 831.48141657207 831.48030993586 43.39 2 -1.0778652241401872 0.3403445642466055 1.0 ['nc|ENSG00000134369|Q8NEY1-6|NAV1', 'nc|ENSG00000134369|Q8NEY1-7|NAV1', 'nc|ENSG00000134369|Q8NEY1-4|NAV1', 'nc|ENSG00000134369|Q8NEY1-2|NAV1', 'nc|ENSG00000134369|Q8NEY1-3|NAV1', 'nc|ENSG00000134369|Q8NEY1|NAV1', 'ENSG00000134369|ENST00000685211|NAV1'] 22768 8620 ETVTLDVTKM True H1975_Epitope_Rep3 1135.5794759308299 1135.57836993586 38.15 2 -1.0778793173069532 0.3403445642466055 1.0 ['ENSG00000025423|ENST00000322165|HSD17B6'] 83940 7051 PVRDPPGRSGP True PC9_epitope_Rep6 1133.5941549085298 1133.5924949037899 36.135 3 -1.0778878743585474 0.3403445642466055 1.0 ['nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1'] 126166 20592 VLFKVLFLIEY True H1975_Epitope_Rep3 1382.8213608787 1382.82026993586 86.062 2 -1.0778910475296286 0.3403445642466055 1.0 ['ENST00000425586.5_1_13:50618805-50623788:-|nuORF'] 15209 6780 EADPWGNQRI True PC9_epitope_Rep1 1184.55743504664 1184.55577490379 30.885 3 -1.0779395631540136 0.3403445642466055 1.0 ['ENSG00000132763|ENST00000401061|MMACHC'] 77916 3036 NVIMWWESLL True H1975_Epitope_Rep1 1289.6478302741698 1289.64619490379 15.452 3 -1.0779951826561418 0.3403445642466055 1.0 ['ENSG00000155886|ENST00000341998|SLC24A2', 'nc|ENSG00000155886|Q9UI40-2|SLC24A2', 'SLC24A2|p.A383Gfs*16|1|0.22|ENSG00000155886|chr9:19577006-19577007|-/T|frameshift_variant'] 100214 5897 SIVVFLRI True NCI_RA007_Epitope_Rep4 945.6011377819299 945.6000499358599 29.306 2 -1.078180606000013 0.3404004711425206 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'ENST00000462106.1_1_7:100451807-100453521:+|nuORF'] 127323 18726 VMKKCRKL True NCI_RA007_Epitope_Rep1 1004.5987123371199 1004.59760993586 76.982 2 -1.078190637633085 0.3404004711425206 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 28218 18820 FRFLPLKLF True NCI_RA007_Epitope_Rep5 1179.7168362405098 1179.71572993586 79.235 2 -1.078211573611815 0.34040845908937956 1.0 ['ENST00000578190.5_1_17:62501363-62501429:-|nuORF'] 16397 9032 EEKAALEEY True H1975_Epitope_Rep2 1080.4975201286798 1080.4969749679299 39.693 1 -1.0782728430397015 0.34040845908937956 1.0 ['ENSG00000142621|ENST00000688493|FHAD1'] 23180 8665 EVLIPLIVIPV True NCI_RA007_Epitope_Rep5 1203.78424709399 1203.7825949037901 40.0 3 -1.078303239636494 0.34040845908937956 1.0 ['ENSG00000122679|ENST00000242249|RAMP3'] 113321 16064 TLRLFEEL True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 69.724 2 -1.0783195952618803 0.34040845908937956 1.0 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000462914.3_1_8:21957359-21958496:+|nuORF', 'ENST00000491733.2_1_8:21958038-21958496:+|nuORF'] 102804 1261 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 7.0637 2 -1.078362081660231 0.34040845908937956 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 127521 10725 VNPFLYCFVGN True H1975_Epitope_Rep1 1271.6008800817497 1271.6003749679298 46.215 1 -1.0783732756404303 0.34040845908937956 1.0 ['ENSG00000180772|ENST00000371906|AGTR2'] 22180 6944 ESTNSMETR True H1975_Epitope_Rep3 1053.43968798273 1053.4385899358601 31.671 2 -1.078385857163245 0.34040845908937956 1.0 ['nc|ENSG00000155959|P61758-2|VBP1', 'ENSG00000155959|ENST00000286428|VBP1', 'MTM1-VBP1|1|fusion'] 135656 18748 WLMLLILA True NCI_RA007_Epitope_Rep4 971.5877962169099 971.58668993586 81.109 2 -1.0784562330077916 0.34046876415546096 1.0 ['ENST00000505241.1_1_5:176950198-176951252:-|nuORF'] 136936 18054 YAGKIQRKR True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 79.109 2 -1.078480097226654 0.3404772997877517 1.0 ['ENST00000567451.1_1_16:19559765-19562567:+|nuORF', 'nc|ENSG00000103540|O43303|CCP110'] 128822 10171 VQATEIHNI True PC9_epitope_Rep1 1023.5349086969098 1023.53380993586 43.999 2 -1.0785108831288999 0.34049437038954317 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 46861 8456 ITKPSQAGEIM True H1975_Epitope_Rep1 1173.60635938501 1173.6052699358602 37.455 2 -1.0785184437719284 0.34049437038954317 1.0 ['FREM1|p.P565S|1|0.32|ENSG00000164946|chr9:14842361-14842361|G/A|missense_variant'] 71888 17200 MENLQQDYELK True PC9_epitope_Rep6 1409.64968074897 1409.6485899358602 78.748 2 -1.078583985022367 0.3405067550080232 1.0 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 105906 20406 SSRNVKVRYL True PC9_epitope_Rep6 1220.6989543302398 1220.6978499358602 91.191 2 -1.0786090214978086 0.3405067550080232 1.0 ['ENST00000487196.1_1_10:5800911-5803598:+|nuORF'] 56580 8018 LDGYVSQLKSV True NCI_RA007_Epitope_Rep3 1207.6448530687098 1207.64320490379 38.632 3 -1.0786179482819638 0.3405067550080232 1.0 ['ENSG00000069248|ENST00000261396|NUP133'] 126975 13159 VLRQFRFDP True NCI_RA007_Epitope_Rep1 1176.64037682496 1176.63926993586 55.181 2 -1.078622658549582 0.3405067550080232 1.0 ['nc|ENSG00000237541|P01909|HLA-DQA1'] 79158 19879 PALVGKDK True PC9_epitope_Rep1 826.4912529797799 826.49014993586 81.284 2 -1.078637922187536 0.3405067550080232 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 22104 13764 ESQAAKDLLYR True NCI_RA007_Epitope_Rep2 1292.67246479888 1292.6713699358602 58.186 2 -1.0786440459439757 0.3405067550080232 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 64569 8991 LPSINGLYN True NCI_RA007_Epitope_Rep4 989.5181960036099 989.51708993586 41.418 2 -1.0786851223995144 0.3405411700764781 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|285|3|anti-sense'] 92452 23607 RLRRLALFP True PC9_epitope_Rep1 1140.7243812324398 1140.72274490379 95.595 3 -1.0787919406615034 0.3405755842542509 1.0 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 91030 18205 RFIQRLRS True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.64047496793 78.778 1 -1.0788237924509334 0.34059705741533924 1.0 ['CON__Q9R0H5'] 113409 10377 TLSEDQMSRL True PC9_epitope_Rep2 1178.56013746858 1178.55850490379 45.239 3 -1.0788543701998037 0.3406055900621118 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 72309 5052 MIEVEFLLR True NCI_RA007_Epitope_Rep3 1148.6263665535998 1148.62471490379 26.868 3 -1.0789354305548402 0.34071764081727723 1.0 ['ENSG00000206536|ENST00000383695|OR5K3', 'OR5K3|p.L254Pfs*25|1|0.29|ENSG00000206536|chr3:98391426-98391426|T/-|frameshift_variant'] 69312 19767 LTVEKSEL True PC9_epitope_Rep4 917.50696261357 917.50586993586 84.157 2 -1.0790443833893877 0.3407476417840922 1.0 ['ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant'] 72733 22449 MNKAHGCE True NCI_RA007_Epitope_Rep4 888.3582072882399 888.35710993586 97.411 2 -1.0790979094908144 0.3407476417840922 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 46057 15305 ISGNPVTLT True PC9_epitope_Rep2 900.4916469026001 900.49109496793 64.153 1 -1.0791847206399463 0.3407644136217783 1.0 ['FCRL5|p.H721Qfs*8|1|0.22|ENSG00000143297|chr1:157524355-157524356|-/T|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.G523Efs*9|1|0.09|ENSG00000143297|chr1:157534727-157534727|C/-|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-4|FCRL5', 'ENST00000481082.1_1_1:157512505-157514867:-|nuORF'] 129613 25497 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 103.33 2 -1.0791962594329132 0.3407644136217783 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 79393 15370 PASRPLPLPSL True PC9_epitope_Rep6 1146.67609362734 1146.6749899358601 71.268 2 -1.0792091904535286 0.3407644136217783 1.0 ['ENST00000454558.2_2_2:97203122-97203740:+|nuORF'] 132595 13722 VVEYAVRTDAW True NCI_RA007_Epitope_Rep2 1307.65100107831 1307.64990993586 58.021 2 -1.0792376040866976 0.3407644136217783 1.0 ['ENSG00000234438|ENST00000432196|KBTBD13'] 7492 9886 ASDFQFCWNQ True H1975_Epitope_Rep3 1244.49205790876 1244.4909699358602 43.057 2 -1.0792514959239126 0.3407644136217783 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'ENST00000481242.5_1_9:130127572-130155530:+|nuORF', 'ENST00000496711.5_1_9:130126995-130155530:+|nuORF'] 23214 19975 EVLWHCHLCP True PC9_epitope_Rep1 1235.55796972395 1235.55686993586 81.659 2 -1.079281637105443 0.3407729431096275 1.0 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 15281 13231 EAEVTVSGRHW True H1975_Epitope_Rep2 1269.61019889549 1269.60910993586 56.021 2 -1.0792956611944926 0.34077706330620644 1.0 ['ENST00000412132.1_1_6:11810894-11811329:+|nuORF'] 17059 6320 EGGPLEGAAW True PC9_epitope_Rep3 985.4505103666099 985.44940993586 29.339 2 -1.0793017998987167 0.34077706330620644 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 6439 5030 APSAHFLKHAH True H1975_Epitope_Rep2 1214.6308747704202 1214.62921490379 24.428 3 -1.0793123527945243 0.3407855922993324 1.0 ['nc|ENSG00000170983|Q96KT6|LINC00208'] 124148 13911 VGSSAFLL True PC9_epitope_Rep2 792.43815477776 792.43704993586 58.787 2 -1.0793351074831308 0.3407941210717659 1.0 ['ENST00000479933.2_1_1:12186012-12202358:+|nuORF', 'nc|ENSG00000120949|P28908-3|TNFRSF8', 'ENSG00000120949|ENST00000263932|TNFRSF8'] 136615 4225 WWPHMGRC True PC9_epitope_Rep1 1071.45311073259 1071.4520099358601 21.145 2 -1.0793657463355015 0.3408155872383367 1.0 ['ENSG00000182771|ENST00000327946|GRID1', 'nc|ENSG00000182771|Q9ULK0-2|GRID1'] 28777 10391 FSTDIPPTNAV True PC9_epitope_Rep2 1160.5713537752802 1160.5702499358601 45.292 2 -1.0795465372440027 0.34088880263923926 1.0 ['ENSG00000263513|ENST00000584486|FAM72C', 'ENSG00000215784|ENST00000400889|FAM72D', 'ENSG00000196550|ENST00000367128|FAM72A', 'ENSG00000188610|ENST00000369390|FAM72B'] 28317 10850 FRRFFQDRWNQ True H1975_Epitope_Rep1 1598.7854779188597 1598.7843899358602 46.693 2 -1.079656466849175 0.34097465685196443 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G', 'nc|ENSG00000006283|O43497-30|CACNA1G', 'nc|ENSG00000006283|O43497-29|CACNA1G', 'nc|ENSG00000006283|O43497-28|CACNA1G', 'nc|ENSG00000006283|O43497-32|CACNA1G', 'nc|ENSG00000006283|O43497-31|CACNA1G', 'nc|ENSG00000006283|O43497-27|CACNA1G'] 42582 18302 IEFVNYNK True PC9_epitope_Rep2 1025.51819600361 1025.5170899358602 75.726 2 -1.0796564863814109 0.34097465685196443 1.0 ['nc|ENSG00000101333|Q15147-2|PLCB4', 'ENST00000492632.5_1_20:9288449-9449247:+|nuORF', 'ENST00000464199.5_1_20:9351789-9459633:+|nuORF', 'nc|ENSG00000101333|Q15147|PLCB4', 'nc|ENSG00000101333|Q15147-5|PLCB4', 'nc|ENSG00000101333|Q15147-4|PLCB4', 'ENSG00000101333|ENST00000378473|PLCB4'] 100108 18895 SISLKPCIL True PC9_epitope_Rep3 972.5677890483199 972.56668993586 77.903 2 -1.0796600323780872 0.34097465685196443 1.0 ['ENST00000551270.1_1_12:104283206-104309165:-|nuORF', 'nc|ENSG00000214198|Q6P2S7-2|TTC41P', 'nc|ENSG00000214198|Q6P2S7|TTC41P'] 114075 7314 TPFGKAAA True H1975_Epitope_Rep3 761.4071890026498 761.40608993586 33.106 2 -1.079661408184109 0.34097465685196443 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'nc|ENSG00000204271|Q5JUX0-2|SPIN3'] 129614 25675 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 104.11 2 -1.079676024778677 0.34098318240620956 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 130500 4624 VSPVKRMQKAA True NCI_RA007_Epitope_Rep2 1213.69651180209 1213.6948649037902 22.611 3 -1.0797624399496653 0.3410175806263826 1.0 ['APBA2|p.R403P|1|0.1|ENSG00000034053|chr15:29093213-29093213|G/C|missense_variant'] 45746 12623 ISAAHSYNP True PC9_epitope_Rep3 958.4508447197801 958.44974993586 53.577 2 -1.0797636066702148 0.34102610540477607 1.0 ['ENSG00000087448|ENST00000381271|KLHL42'] 36424 20235 GVFVCYFYY True PC9_epitope_Rep2 1159.5048544385897 1159.5042749679299 83.251 1 -1.0798032134470337 0.34103462996261463 1.0 ['ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1', 'ENST00000508607.1_1_17:47783564-47785273:-|nuORF', 'ENST00000509781.5_1_17:47783523-47785306:-|nuORF', 'ENST00000435059.6_1_17:47781399-47785273:-|nuORF'] 36184 7740 GVAVREDGGTV True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 37.162 2 -1.079810239498473 0.34104315429990684 1.0 ['ENSG00000129250|ENST00000320785|KIF1C', 'KIF1C|p.D675Gfs*5|1|0.04|ENSG00000129250|chr17:5022102-5022103|-/G|frameshift_variant', 'ENST00000572959.1_1_17:4910768-4914860:+|nuORF'] 10197 11591 AYYRYVAI True NCI_RA007_Epitope_Rep3 1017.5283667644899 1017.52726993586 52.721 2 -1.0798872921871143 0.34106872598859095 1.0 ['OR8B4|p.D120Y|1|0.15|ENSG00000280090|chr11:124424514-124424514|C/A|missense_variant', 'OR4P4|p.D119Y|1|0.2|ENSG00000181927|chr11:55638712-55638712|G/T|missense_variant'] 132165 4048 VTVPPDVFF True NCI_RA007_Epitope_Rep5 1019.53278343859 1019.53168993586 22.007 2 -1.0799091397923652 0.34106872598859095 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 120020 7743 VDRRTCVP True NCI_RA007_Epitope_Rep4 944.4861846826799 944.48508993586 36.46 2 -1.079922853039556 0.34106872598859095 1.0 ['nc|ENSG00000197444|Q9ULD0-3|OGDHL', 'nc|ENSG00000197444|Q9ULD0-2|OGDHL', 'ENSG00000197444|ENST00000374103|OGDHL'] 3135 6259 AGARKKELL True PC9_epitope_Rep1 984.6080140675198 984.60690993586 28.889 2 -1.0800025745952846 0.34110311998758214 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 574 7144 AARALVNL True PC9_epitope_Rep2 826.50248636982 826.5019349679301 32.872 1 -1.080052224904726 0.3411157532563283 1.0 ['ENST00000530074.1_1_8:145192726-145193642:+|nuORF', 'ENSG00000235173|ENST00000347708|HGH1'] 43919 19837 IICARKIV True PC9_epitope_Rep1 914.5735431351 914.57244993586 81.119 2 -1.0800522986295262 0.3411157532563283 1.0 ['ENSG00000120563|ENST00000649382|LYZL1', 'nc|ENSG00000120563|Q6UWQ5-2|LYZL1'] 16546 7375 EELRGSSRL True NCI_RA007_Epitope_Rep5 1045.55162139021 1045.5505299358601 35.048 2 -1.080060011940943 0.3411157532563283 1.0 ['ENST00000430312.1_1_1:155172203-155174968:+|nuORF'] 33678 11617 GLGSRFGVP True PC9_epitope_Rep1 888.4817509252399 888.48064993586 49.563 2 -1.08011055714281 0.3411372102649007 1.0 ['ENST00000292539.8_1_8:145722273-145722696:+|nuORF', 'ENST00000526183.5_1_8:145722273-145723094:+|nuORF'] 131669 10408 VTMIIAVCI True PC9_epitope_Rep5 961.5340463918899 961.53294993586 45.02 2 -1.0802078272971578 0.34118453558909884 1.0 ['ENST00000523831.1_1_8:101513253-101513298:+|nuORF'] 91174 2447 RGAGSKRKRR True PC9_epitope_Rep3 1170.71700443622 1170.71536490379 13.503 3 -1.0802756657270247 0.34119305688491086 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 44734 8452 ILWHTMKNYYR True NCI_RA007_Epitope_Rep1 1523.77073937151 1523.76910490379 36.876 3 -1.0803126056256915 0.34121451206104897 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 64371 22307 LPLLRVPLL True PC9_epitope_Rep2 1032.70593720364 1032.70484993586 91.282 2 -1.0803311164430522 0.3412186194497976 1.0 ['ENST00000296597.9_1_5:60240975-60241137:+|nuORF'] 30541 16030 GAGQNWAP True H1975_Epitope_Rep1 799.3613014393899 799.36075496793 66.995 1 -1.080334804611442 0.3412186194497976 1.0 ['ENST00000374005.7_1_1:27951657-27961627:-|nuORF'] 119332 23618 VANVQPSSKRA True NCI_RA007_Epitope_Rep2 1155.6360197205101 1155.6343649037901 99.029 3 -1.0803820092004681 0.34122713986393854 1.0 ['ENST00000464717.5_1_7:154739579-154754102:-|nuORF', 'nc|ENSG00000157212|Q6ZW49-2|PAXIP1', 'nc|ENSG00000157212|Q6ZW49-1|PAXIP1', 'ENST00000457196.5_1_7:154735861-154782774:-|nuORF', 'ENSG00000157212|ENST00000404141|PAXIP1'] 69050 18320 LTQLHSCFQTM True PC9_epitope_Rep5 1307.6002284587498 1307.59858490379 75.482 3 -1.0804220059319147 0.34123566005768313 1.0 ['nc|ENSG00000166501|P05771|PRKCB', 'PRKCB|p.G478Dfs*19|1|0.12|ENSG00000166501|chr16:24180826-24180826|G/-|frameshift_variant', 'PRKCB|p.K520Sfs*39|1|0.08|ENSG00000166501|chr16:24185132-24185132|G/-|frameshift_variant', 'ENSG00000166501|ENST00000643927|PRKCB'] 86819 11490 QLPRLLGSA True PC9_epitope_Rep1 953.5658149023699 953.56470993586 49.077 2 -1.0804542098172016 0.34124418003103985 1.0 ['nc|ENSG00000196943|Q86U38-2|NOP9', 'ENSG00000196943|ENST00000267425|NOP9'] 17108 13109 EGLSYYKP True NCI_RA007_Epitope_Rep4 955.4650978015899 955.46400993586 57.523 2 -1.0804845220186072 0.34124828638679805 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 85602 6733 QGHHAAGG True NCI_RA007_Epitope_Rep2 733.3255846370099 733.32503496793 30.804 1 -1.0805517864310854 0.34124828638679805 1.0 ['ENST00000525164.5_1_1:1248165-1249114:-|nuORF'] 98527 23186 SFMLILRGVK True PC9_epitope_Rep3 1162.6896355164997 1162.68852993586 94.455 2 -1.0806319437104672 0.34126091173617845 1.0 ['SLCO2B1|p.I622Sfs*10|1|0.47|ENSG00000137491|chr11:75203340-75203340|C/-|frameshift_variant', 'nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1', 'ENST00000531756.5_1_11:74862426-74914042:+|nuORF', 'nc|ENSG00000137491|O94956-2|SLCO2B1', 'nc|ENSG00000137491|O94956-4|SLCO2B1'] 80464 24629 PGKVLVPLA True H1975_Epitope_Rep1 892.5745886809199 892.57348993586 102.05 2 -1.080664255547716 0.34126091173617845 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 5303 9722 ALQLHADV True PC9_epitope_Rep5 865.46576650793 865.46466993586 42.364 2 -1.0807105980371274 0.34126091173617845 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 59957 3878 LGGVKKEFFYC True H1975_Epitope_Rep1 1289.6478302741698 1289.64619490379 19.597 3 -1.0807173508835604 0.34128236298269665 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 86172 16063 QIENFVPV True PC9_epitope_Rep6 944.4967322830398 944.49562993586 74.111 2 -1.0807385219486754 0.3413038136743958 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000496727.1_1_17:18154365-18154758:-|nuORF'] 75348 10248 NIRVSIKEPSK True NCI_RA007_Epitope_Rep1 1269.74048478905 1269.7393899358601 43.873 2 -1.080830031042809 0.34139812755392335 1.0 ['ENST00000554295.1_1_12:98849015-98849897:-|nuORF'] 18190 12791 EILITRQRHI True H1975_Epitope_Rep3 1277.75680355953 1277.75570993586 54.418 2 -1.0808598850066373 0.34139812755392335 1.0 ['ENSG00000140623|ENST00000268231|SEPTIN12'] 128280 18864 VPPMADVVTI True PC9_epitope_Rep2 1040.55761828744 1040.55652993586 77.926 2 -1.0808780695203595 0.34139812755392335 1.0 ['ENST00000599662.1_1_19:42312894-42313461:+|nuORF'] 57475 8991 LEDDGEFYM True PC9_epitope_Rep3 1117.42739196353 1117.42628993586 39.528 2 -1.0809043235239404 0.34139812755392335 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 41845 14921 IAWEPVQYFN True PC9_epitope_Rep1 1265.6080736371698 1265.60641490379 62.216 3 -1.0809126726476053 0.34139812755392335 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 81062 11028 PIREKEVT True PC9_epitope_Rep4 970.5447451046199 970.54364993586 50.196 2 -1.0809789964773944 0.34140664399415516 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 60713 20045 LHQLERETL True PC9_epitope_Rep4 1137.61422164677 1137.6131299358601 85.24 2 -1.0811089070190263 0.34145395298316394 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 118968 18295 VAEAGVFP True PC9_epitope_Rep6 788.4068546494799 788.40630496793 83.014 1 -1.0811308605486696 0.34146246848128275 1.0 ['ENST00000372797.7_2_1:40537598-40537793:+|nuORF'] 121897 23529 VFQRQRIP True PC9_epitope_Rep6 1042.6035973934197 1042.60250993586 103.65 2 -1.081149772598801 0.3414709837591807 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant'] 31841 17079 GEISKQAP True PC9_epitope_Rep1 828.4341320264799 828.43302993586 70.52 2 -1.0812219970785726 0.34150504266873544 1.0 ['nc|ENSG00000168826|Q6ZSB9-4|ZBTB49', 'nc|ENSG00000168826|Q6ZSB9-3|ZBTB49', 'nc|ENSG00000168826|Q6ZSB9-5|ZBTB49', 'nc|ENSG00000168826|Q6ZSB9-2|ZBTB49', 'ENSG00000168826|ENST00000337872|ZBTB49'] 83907 14749 PVPTRVYKRV True PC9_epitope_Rep4 1213.7295261825298 1213.72789490379 64.665 3 -1.0812483295885884 0.34150504266873544 1.0 ['ENST00000520704.1_1_8:43028977-43029178:+|nuORF'] 12985 8004 DLLSALVSMEK True NCI_RA007_Epitope_Rep1 1204.63732516012 1204.63622993586 35.128 2 -1.0812836307314433 0.34150504266873544 1.0 ['ENSG00000188782|ENST00000456354|CATSPER4'] 75451 6830 NKDDDKHDLRL True NCI_RA007_Epitope_Rep5 1367.67934108447 1367.67769490379 32.956 3 -1.0812865016574105 0.34150504266873544 1.0 ['UNC79|p.Q497L|1|0.26|ENSG00000133958|chr14:93540797-93540797|A/T|missense_variant'] 31190 7488 GCCCCWESS True NCI_RA007_Epitope_Rep3 976.25473038948 976.25362993586 36.576 2 -1.0813157430980578 0.3415220708024101 1.0 ['ENST00000486434.1_1_6:29573344-29574170:-|nuORF', 'ENST00000355973.7_1_6:29572734-29574170:-|nuORF'] 47402 18461 IVLDQKDHAV True PC9_epitope_Rep6 1136.61897267404 1136.6178699358602 83.65 2 -1.0813178530625616 0.3415220708024101 1.0 ['nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1', 'ENST00000495015.5_1_9:33025323-33036160:+|nuORF', 'ENST00000465677.1_1_9:33034269-33037131:+|nuORF'] 74298 8292 NELDDLRQHLD True H1975_Epitope_Rep1 1366.64770660302 1366.6466099358602 36.827 2 -1.08143357099548 0.34155170853426764 1.0 ['CEP72|p.K511N|1|0.18|ENSG00000112877|chr5:640598-640598|G/T|missense_variant'] 46282 17104 ISPRGAGYTF True PC9_epitope_Rep5 1067.53999407735 1067.5388899358602 70.812 2 -1.081511729182473 0.34155170853426764 1.0 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 19711 10604 ELRQPFFP True PC9_epitope_Rep3 1032.5392658013598 1032.5381699358602 45.734 2 -1.0815258969445662 0.34155170853426764 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 110926 9367 TGWRWRSR True PC9_epitope_Rep2 1103.5736942474698 1103.5725899358602 41.365 2 -1.0815410028749823 0.34155170853426764 1.0 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 15317 9343 EAFRLPGEAPV True PC9_epitope_Rep5 1184.61897267404 1184.61733490379 40.891 3 -1.0815441165140969 0.34155170853426764 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 57492 9587 LEDIRQRYEQQ True NCI_RA007_Epitope_Rep2 1476.7321049333202 1476.7310099358601 41.906 2 -1.0815900413519826 0.34155580550491926 1.0 ['ENSG00000154240|ENST00000535342|CEP112'] 84033 19516 PVVEPVVREKQ True PC9_epitope_Rep1 1278.7295857521797 1278.7284899358601 79.889 2 -1.0815934906076963 0.34155580550491926 1.0 ['HDAC9|p.D38E|1|0.07|ENSG00000048052|chr7:18585372-18585372|C/A|missense_variant'] 36072 15515 GVACLYGRL True PC9_epitope_Rep5 950.5007721176598 950.49966993586 64.688 2 -1.0816076404550448 0.3415643180349063 1.0 ['ENST00000407450.1_1_6:118774123-118774444:-|nuORF'] 61211 18562 LILLLLLIKAA True PC9_epitope_Rep1 1192.85226708416 1192.85116993586 76.186 2 -1.0817134986754813 0.3416112935336246 1.0 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22'] 37520 11179 GVVDVLIGKH True H1975_Epitope_Rep3 1035.6076797143498 1035.60658993586 48.098 2 -1.08174145341809 0.3416112935336246 1.0 ['SPIN2B|p.G208V|1|0.2|ENSG00000186787|chrX:57120007-57120007|C/A|missense_variant'] 127325 18950 VMKKMLGLR True NCI_RA007_Epitope_Rep2 1074.6405771490997 1074.63946993586 78.559 2 -1.0817458235842223 0.3416112935336246 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 75353 10070 NISCKASQDI True PC9_epitope_Rep6 1077.5124590001699 1077.51136993586 49.328 2 -1.0817608793579871 0.3416112935336246 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 120303 7762 VEDSKKESSS True H1975_Epitope_Rep1 1094.5091474415399 1094.50804993586 34.814 2 -1.0817758999605174 0.3416153885929986 1.0 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-2|GCFC2'] 23545 20840 EVWFKNRRAKW True PC9_epitope_Rep3 1518.82080079842 1518.8197099358601 85.433 2 -1.0818448456405523 0.3416153885929986 1.0 ['ENSG00000063515|ENST00000086933|GSC2', 'ENSG00000133937|ENST00000238558|GSC'] 68812 13733 LTLQKPSP True H1975_Epitope_Rep1 882.51746772762 882.51691496793 57.963 1 -1.0818802997780825 0.34162389958245537 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 80465 21955 PGKVLVPLA True NCI_RA007_Epitope_Rep5 892.5745886809199 892.57348993586 91.586 2 -1.0819038500484437 0.34163241035187053 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 128350 10686 VPQPASPLMHI True NCI_RA007_Epitope_Rep4 1188.6325145632 1188.6314099358601 47.952 2 -1.0819618792094423 0.3416752843846949 1.0 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF'] 129225 16256 VQTLRWQRWQR True H1975_Epitope_Rep3 1555.84841252859 1555.84730993586 67.984 2 -1.0819733032453738 0.3416752843846949 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 88760 19305 QTPKKPGLRR True H1975_Epitope_Rep3 1179.7200241279897 1179.71836490379 80.926 3 -1.0819880392059567 0.341683794159848 1.0 ['ENSG00000111276|ENST00000228872|CDKN1B'] 91510 16717 RHWQWWRLFTK True NCI_RA007_Epitope_Rep2 1642.8633343167396 1642.8622299358601 69.758 2 -1.0821565607556145 0.34175693492929343 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 12459 16153 DIYKNDYYRKR True H1975_Epitope_Rep2 1532.77357582248 1532.77246993586 67.344 2 -1.0822279928081862 0.34180422165634733 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'CD74-ROS1|1|fusion'] 34658 8220 GQCLCHRILHR True NCI_RA007_Epitope_Rep4 1334.68121317446 1334.67955490379 38.406 3 -1.0822597180066649 0.3418127294348793 1.0 ['REM1|p.Q152Pfs*19|1|0.19|ENSG00000088320|chr20:31482316-31482317|-/C|frameshift_variant'] 19819 11577 ELSQMQKKYYK True NCI_RA007_Epitope_Rep1 1444.73843618372 1444.73732993586 49.002 2 -1.0824784338424163 0.3418600142183158 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 12776 7223 DLERAWVHP True NCI_RA007_Epitope_Rep1 1121.5617921510898 1121.5606899358602 32.085 2 -1.0825260611202314 0.3418770276732974 1.0 ['ENST00000491278.5_1_2:128392149-128394989:+|nuORF'] 77866 5052 NVFHKTSVI True NCI_RA007_Epitope_Rep5 1043.57637958607 1043.5752899358602 26.132 2 -1.082529447597637 0.3418770276732974 1.0 ['CYP46A1|p.R261Afs*5|1|0.29|ENSG00000036530|chr14:99715896-99715896|C/-|frameshift_variant', 'ENSG00000036530|ENST00000261835|CYP46A1'] 73666 17023 MYKAILCVQN True NCI_RA007_Epitope_Rep5 1181.5936865263297 1181.5925899358601 72.24 2 -1.0825522251390716 0.3418811151753286 1.0 ['IFIH1|p.H859L|1|0.2|ENSG00000115267|chr2:162272266-162272266|T/A|missense_variant'] 61196 18734 LILIASYKVI True PC9_epitope_Rep5 1131.72673221787 1131.72508490379 77.075 3 -1.0825662342860498 0.3418811151753286 1.0 ['OR4C6|p.T217K|1|0.08|ENSG00000181903|chr11:55665816-55665816|C/A|missense_variant'] 69852 13002 LVHHVRQHLPL True NCI_RA007_Epitope_Rep1 1347.7887723941499 1347.78766993586 54.566 2 -1.0826185153194874 0.34189370831825466 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 136475 24561 WVLSLALK True NCI_RA007_Epitope_Rep3 928.57458868092 928.57404496793 106.25 1 -1.0826465825105314 0.34189370831825466 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-2|ZZEF1'] 37821 5506 GYHEEPEAR True NCI_RA007_Epitope_Rep2 1086.47303671634 1086.47192993586 26.032 2 -1.0826509468111196 0.34189370831825466 1.0 ['ENST00000486668.5_1_1:228333270-228334576:+|nuORF'] 36367 20204 GVFEGKLNV True PC9_epitope_Rep3 961.5232813840498 961.52218993586 82.973 2 -1.082664695356613 0.34191038680744923 1.0 ['ENST00000489515.1_1_22:37866003-37868629:-|nuORF', 'nc|ENSG00000100060|O00587-2|MFNG', 'ENSG00000100060|ENST00000356998|MFNG'] 82779 9397 PRNVSEHIWEV True PC9_epitope_Rep5 1364.68369818892 1364.68260993586 41.1 2 -1.0826832325040234 0.34191038680744923 1.0 ['ENST00000478452.1_1_10:99221527-99222458:-|nuORF', 'ENST00000495415.5_1_10:99221527-99223714:-|nuORF'] 126850 17478 VLQALPAEP True PC9_epitope_Rep1 936.5280324113198 936.52692993586 72.025 2 -1.0827064634088932 0.34191038680744923 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 101635 12507 SLLRKNFGD True PC9_epitope_Rep1 1048.56654317836 1048.5654499358602 52.976 2 -1.0827326257112369 0.34191038680744923 1.0 ['ENST00000367265.7_1_1:202725604-202729586:-|nuORF'] 116098 13147 TSRILRYL True PC9_epitope_Rep2 1020.6080140675199 1020.60690993586 55.842 2 -1.0827477198428406 0.34191038680744923 1.0 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2'] 101341 12804 SLISKHGTL True PC9_epitope_Rep3 954.5498304850599 954.54872993586 54.273 2 -1.082892646861658 0.34194473881465015 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 141888 5330 YVDPYELAS True PC9_epitope_Rep5 1055.4811417885498 1055.48004993586 25.514 2 -1.0830347636603994 0.3419532431279805 1.0 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 66720 9027 LSLGNQSLPHS True H1975_Epitope_Rep1 1151.59348620219 1151.5923899358602 39.629 2 -1.0831056819955782 0.3419875936934608 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 58180 7259 LEKWRKYFP True NCI_RA007_Epitope_Rep1 1265.6920780446499 1265.69044490379 32.226 3 -1.083216280392517 0.3420175234550671 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164', 'ENSG00000110274|ENST00000278935|CEP164', 'ENST00000528706.5_1_11:117279912-117282881:+|nuORF', 'ENST00000533675.5_1_11:117265793-117282881:+|nuORF', 'ENST00000533223.1_1_11:117257895-117280842:+|nuORF', 'ENST00000532187.1_1_11:117280536-117282168:+|nuORF'] 116190 7211 TSVQGQRQPAP True NCI_RA007_Epitope_Rep4 1167.5996342117899 1167.5985299358601 34.371 2 -1.0832429657954432 0.3420175234550671 1.0 ['ENST00000437508.6_2_4:154074414-154191598:+|nuORF'] 57700 1857 LEEKIVSLIK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 9.8149 3 -1.08341347058575 0.34209064006306295 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 96807 8819 SAQTHFAA True PC9_epitope_Rep1 831.3875161872298 831.38640993586 38.764 2 -1.0834182170707536 0.34209846233363483 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 61017 13378 LIEQYELREEH True PC9_epitope_Rep3 1457.71505788685 1457.7134249037902 56.49 3 -1.0834352418283206 0.34209846233363483 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 101623 15536 SLLREVGQV True PC9_epitope_Rep5 999.5712942056299 999.57018993586 64.769 2 -1.083441480790921 0.34209846233363483 1.0 ['ENST00000572075.5_1_17:63645-84290:-|nuORF'] 102251 12521 SLSHEYHL True PC9_epitope_Rep3 984.4664947839201 984.46538993586 53.187 2 -1.0834588389613655 0.34209846233363483 1.0 ['ENST00000475700.1_1_1:112309433-112309511:+|nuORF'] 67742 7605 LSYFSFWWWWW True NCI_RA007_Epitope_Rep2 1692.7554065771997 1692.7543099358602 34.205 2 -1.0834794678070796 0.34209846233363483 1.0 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 111939 15221 TIQACWRSY True H1975_Epitope_Rep1 1126.52296411422 1126.5218699358602 63.811 2 -1.0834828521423512 0.34209846233363483 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 85409 8633 QEVREANKY True H1975_Epitope_Rep2 1135.5621860739097 1135.56108993586 38.163 2 -1.0834886975910865 0.34209846233363483 1.0 ['nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 40164 6170 HQDSSILESR True PC9_epitope_Rep5 1170.5629143499 1170.56125490379 28.718 3 -1.0835615947584136 0.3421025428984908 1.0 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF', 'nc|ENSG00000159788|O14924-7|RGS12', 'nc|ENSG00000159788|O14924-6|RGS12', 'nc|ENSG00000159788|O14924-2|RGS12', 'nc|ENSG00000159788|O14924-3|RGS12', 'nc|ENSG00000159788|O14924-5|RGS12', 'nc|ENSG00000159788|O14924-4|RGS12', 'ENSG00000159788|ENST00000336727|RGS12', 'ENST00000515521.5_1_4:3422373-3428454:+|nuORF'] 24546 19783 FAGELNPVAPM True PC9_epitope_Rep4 1144.5586809166 1144.55758993586 84.222 2 -1.083574919154296 0.3421025428984908 1.0 ['AP3D1|p.K610M|1|0.42|ENSG00000065000|chr19:2117252-2117252|T/A|missense_variant'] 82930 12357 PSDIRLAGTL True PC9_epitope_Rep1 1041.5818588893299 1041.5807699358602 52.389 2 -1.0836596358273647 0.3421627278952877 1.0 ['ENSG00000175764|ENST00000321582|TTLL11', 'ENST00000474723.5_1_9:124736354-124752043:-|nuORF', 'nc|ENSG00000175764|Q8NHH1-2|TTLL11'] 14004 4561 DRERDRDRDRK True NCI_RA007_Epitope_Rep4 1515.7614479989895 1515.7597949037902 23.946 3 -1.0837289741570146 0.3421841486420136 1.0 ['ENSG00000174243|ENST00000308025|DDX23', 'nc|ENSG00000174243|Q9BUQ8-2|DDX23', 'ENST00000551098.5_1_12:49231704-49245869:-|nuORF', 'ENST00000553182.5_1_12:49231126-49245869:-|nuORF'] 115956 10868 TSHPPPVP True PC9_epitope_Rep1 830.4286527232199 830.42754993586 46.689 2 -1.083741689901701 0.34219672597129086 1.0 ['ENST00000341319.7_1_3:183209591-183209699:-|nuORF'] 32793 3365 GHFHGPWC True PC9_epitope_Rep3 939.3809913381499 939.37988993586 18.055 2 -1.0837492242414954 0.34219672597129086 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 21729 16479 ERTHKNLSDME True H1975_Epitope_Rep1 1358.6248629834597 1358.62376993586 68.754 2 -1.0837900204489985 0.34219672597129086 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 73471 10061 MVDARSIP True PC9_epitope_Rep1 887.4534875720699 887.45238993586 43.57 2 -1.0838097026583695 0.34220522494121297 1.0 ['ENSG00000169139|ENST00000523111|UBE2V2', 'ENST00000521628.1_1_8:48962382-48973385:+|nuORF'] 98447 11638 SFFSGITGFIS True H1975_Epitope_Rep2 1161.57062549929 1161.5695299358601 49.835 2 -1.0838268037687442 0.3422137236915206 1.0 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF'] 118762 4695 VAAAALAR True NCI_RA007_Epitope_Rep5 741.44972252097 741.44917496793 24.745 1 -1.0838595953536367 0.3422222222222222 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 6311 15656 APRMRAGDGCP True PC9_epitope_Rep1 1129.5120821606897 1129.5109899358602 65.041 2 -1.084051208261686 0.3422307205333264 1.0 ['ENST00000558061.1_1_15:48938242-48938584:+|nuORF'] 18779 17572 ELDDSDFSEDS True PC9_epitope_Rep1 1257.45208605789 1257.4509899358602 72.383 2 -1.0840712826346022 0.34223921862484175 1.0 ['nc|ENSG00000186638|Q5T7B8-4|KIF24', 'nc|ENSG00000186638|Q5T7B8-2|KIF24', 'ENSG00000186638|ENST00000402558|KIF24'] 20668 9777 EQARPEQEYKR True H1975_Epitope_Rep1 1432.7058901854796 1432.7047899358602 42.536 2 -1.0840841962330885 0.3422477164967766 1.0 ['ENSG00000181786|ENST00000324436|ACTL9'] 11197 11588 DEAAARLLTVP True H1975_Epitope_Rep1 1154.62953735774 1154.62844993586 49.56 2 -1.084113506842051 0.34226913337812 1.0 ['ENSG00000130313|ENST00000252603|PGLS'] 59042 18860 LEVRNSKSI True H1975_Epitope_Rep3 1044.5927579262 1044.5916699358602 79.105 2 -1.0841408382209596 0.34229054970609135 1.0 ['nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1'] 100920 11682 SLFDSRGWPL True PC9_epitope_Rep1 1176.5927579262 1176.59110490379 49.812 3 -1.084145916143487 0.3422946245171625 1.0 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 31698 23969 GEGCAGCF True H1975_Epitope_Rep1 742.2414462005 742.2408949679301 99.48 1 -1.0841475714797633 0.3422946245171625 1.0 ['ENST00000446041.6_1_3:140660682-140660838:+|nuORF'] 131388 8528 VTHFYPLMGV True PC9_epitope_Rep1 1162.58450174162 1162.58284490379 37.64 3 -1.0841640093377254 0.34229869911767363 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 64054 20958 LPAPRRRRRRQ True H1975_Epitope_Rep2 1460.9025137901199 1460.90086490379 86.76 3 -1.0841928853617555 0.34229869911767363 1.0 ['PLXND1|p.L47Gfs*388|1|0.33|ENSG00000004399|chr3:129606501-129606502|-/GGCGCCGGCC|frameshift_variant'] 36854 13499 GVLKKVIRHKR True H1975_Epitope_Rep2 1332.8830071321597 1332.88135490379 57.057 3 -1.0842081602149172 0.3423112695706092 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 31700 23879 GEGCAGCF True H1975_Epitope_Rep3 742.2414462005 742.2408949679301 99.565 1 -1.0842489428593056 0.3423112695706092 1.0 ['ENST00000446041.6_1_3:140660682-140660838:+|nuORF'] 109197 9798 TAPWDPQVP True H1975_Epitope_Rep1 1009.4868958753299 1009.48578993586 42.615 2 -1.0842518053522228 0.3423112695706092 1.0 ['ENSG00000112149|ENST00000379153|CD83'] 31699 24193 GEGCAGCF True H1975_Epitope_Rep2 742.2414462005 742.2408949679301 99.593 1 -1.0842640771035044 0.3423153434779239 1.0 ['ENST00000446041.6_1_3:140660682-140660838:+|nuORF'] 56019 11374 LASLYVMMTVT True PC9_epitope_Rep5 1227.62431794827 1227.62322993586 48.746 2 -1.0843077174226727 0.3423153434779239 1.0 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5'] 65132 10240 LQNRRLFQSLH True H1975_Epitope_Rep1 1410.7844152896998 1410.7833099358602 44.331 2 -1.0843672922036123 0.34236259122908996 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 85568 7200 QGEVTVASIDD True PC9_epitope_Rep2 1132.52479750568 1132.52370993586 33.086 2 -1.0844342331202832 0.34237958071224667 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 124056 4902 VGSKGPQGPP True H1975_Epitope_Rep3 922.4872302284998 922.48612993586 23.984 2 -1.0844416883131611 0.34237958071224667 1.0 ['COL6A6|p.D2019Rfs*12|1|0.45|ENSG00000206384|chr3:130661854-130661855|-/C|frameshift_variant', 'ENSG00000206384|ENST00000358511|COL6A6'] 31711 18488 GEGKVRRV True NCI_RA007_Epitope_Rep5 899.5300980999899 899.52900993586 77.939 2 -1.0844700831727299 0.3423951647273056 1.0 ['ENST00000552528.1_1_12:56503657-56504297:+|nuORF'] 61160 16073 LIKMNLTHNTL True NCI_RA007_Epitope_Rep1 1296.7223921967598 1296.72128993586 66.624 2 -1.0844709844806282 0.3423951647273056 1.0 ['NLRP14|p.Q1023H|1|0.32|ENSG00000158077|chr11:7070379-7070379|G/T|missense_variant'] 80196 12022 PFWAWRSWCWR True PC9_epitope_Rep3 1579.7295432658698 1579.72789490379 51.27 3 -1.0844767669709559 0.3423951647273056 1.0 ['ENST00000394697.6_1_16:50322145-50324440:+|nuORF'] 36473 14839 GVGGRKPH True NCI_RA007_Epitope_Rep3 806.4511195032999 806.45057496793 65.799 1 -1.084485633963502 0.3423951647273056 1.0 ['ENST00000520083.1_1_9:36923038-36923170:-|nuORF'] 10335 14977 CFAYSPPG True H1975_Epitope_Rep2 840.3476255211998 840.34652993586 62.76 2 -1.0846011938889246 0.3423951647273056 1.0 ['ENSG00000134780|ENST00000257215|DAGLA'] 62585 4477 LLKSYILFGEK True NCI_RA007_Epitope_Rep2 1309.7645742785696 1309.76293490379 22.048 3 -1.0846024451175964 0.3423951647273056 1.0 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 4443 11476 AISGKIPSP True H1975_Epitope_Rep3 868.50181766348 868.5012649679301 49.264 1 -1.084627475065206 0.3423951647273056 1.0 ['ENSG00000135912|ENST00000392102|TTLL4', 'TTLL4|p.E531Vfs*29|1|0.07|ENSG00000135912|chr2:218740161-218740162|-/TCACAGTTAGATTCTC|frameshift_variant', 'TTLL4|p.T586Yfs*9|1|0.26|ENSG00000135912|chr2:218745196-218745197|-/C|frameshift_variant'] 79726 17737 PDWIALHTSR True PC9_epitope_Rep6 1194.6145559999397 1194.6129149037902 80.859 3 -1.0846684411615963 0.3423951647273056 1.0 ['ENSG00000088035|ENST00000263440|ALG6'] 23199 11426 EVLQRGEAL True PC9_epitope_Rep5 1013.5505587610498 1013.54946993586 48.948 2 -1.084682825578245 0.3423951647273056 1.0 ['ENSG00000265808|ENST00000578049|SEC22B'] 119385 11712 VAPPRVAAL True PC9_epitope_Rep3 892.5494365622399 892.54832993586 50.068 2 -1.0847246449127927 0.3423951647273056 1.0 ['ENSG00000185888|ENST00000366757|PRSS38'] 30225 6469 FYTIFRFFEQR True H1975_Epitope_Rep1 1552.7826839541997 1552.7815899358602 29.945 2 -1.084739006538261 0.3423951647273056 1.0 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 60092 11166 LGLRISKF True PC9_epitope_Rep2 932.58073669052 932.57962993586 48.275 2 -1.0847574473047399 0.3423951647273056 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 77720 16764 NTLERREKHEK True PC9_epitope_Rep5 1438.7640737679396 1438.7629699358602 69.487 2 -1.0847617309876012 0.3423951647273056 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 84550 16113 QARSKKGK True H1975_Epitope_Rep2 901.5457481641299 901.54464993586 67.191 2 -1.0848038180256647 0.3423951647273056 1.0 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1'] 33350 16037 GKSSVSFY True H1975_Epitope_Rep1 873.4232329896099 873.4226849679301 67.024 1 -1.0849418820816592 0.34248521321383374 1.0 ['ENST00000554649.1_1_15:95578663-95578804:-|nuORF'] 41846 13078 IAWEPVQYFN True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 55.582 3 -1.0849442202351343 0.34248521321383374 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 121078 10756 VEQYVHLLDIR True NCI_RA007_Epitope_Rep2 1383.7510494727496 1383.74994993586 46.438 2 -1.0849503716753148 0.34248521321383374 1.0 ['nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENSG00000103494|ENST00000647211|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 79958 15149 PETATMNKL True NCI_RA007_Epitope_Rep5 1003.50083168731 1003.49972993586 64.95 2 -1.0849711186637918 0.3425066184541874 1.0 ['ENST00000510023.5_1_17:47074855-47081966:+|nuORF'] 99994 13992 SIPREVVAYNK True H1975_Epitope_Rep1 1274.6982856239 1274.69718993586 58.98 2 -1.0850018766997809 0.3425151092515109 1.0 ['nc|ENSG00000080839|P28749-2|RBL1', 'ENSG00000080839|ENST00000373664|RBL1'] 36298 8462 GVEFHYVYSHF True NCI_RA007_Epitope_Rep5 1383.62478633047 1383.62368993586 39.23 2 -1.085076820367474 0.34252766693784786 1.0 ['ENSG00000143815|ENST00000272163|LBR'] 103328 20888 SPLVVKFR True PC9_epitope_Rep4 944.5807366905199 944.57962993586 88.504 2 -1.0850868726748466 0.34252766693784786 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'HYDIN|p.I1870Kfs*10|1|0.33|ENSG00000157423|chr16:70970523-70970530|TTCTTCTA/-|frameshift_variant', 'HYDIN|p.Q2268Rfs*6|1|0.09|ENSG00000157423|chr16:70941687-70941687|G/-|frameshift_variant', 'HYDIN|p.R2422Gfs*41|1|0.09|ENSG00000157423|chr16:70921112-70921112|T/-|frameshift_variant'] 42792 21213 IENLQPKTK True PC9_epitope_Rep1 1069.6131590176099 1069.61206993586 86.423 2 -1.0851328974509802 0.34252766693784786 1.0 ['COL12A1|p.E968K|1|0.17|ENSG00000111799|chr6:75165588-75165588|C/T|missense_variant'] 61629 9751 LKPEPTKTF True PC9_epitope_Rep5 1059.5964463243101 1059.5953499358602 42.477 2 -1.0851574727567688 0.34253173383608165 1.0 ['TEX35|p.G145Efs*45|1|0.13|ENSG00000240021|chr1:178520764-178520764|G/-|frameshift_variant', 'nc|ENSG00000240021|Q5T0J7-3|TEX35', 'nc|ENSG00000240021|Q5T0J7-5|TEX35', 'nc|ENSG00000240021|Q5T0J7-2|TEX35', 'ENSG00000240021|ENST00000319416|TEX35'] 22655 6344 ETPQTVPA True PC9_epitope_Rep1 841.4181476091699 841.41704993586 29.213 2 -1.08518978620131 0.34253173383608165 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 95399 6483 RWERYRRECQE True NCI_RA007_Epitope_Rep2 1609.7531918144098 1609.7515349037901 29.827 3 -1.0852392940198234 0.3425616259700683 1.0 ['nc|ENSG00000010310|P48546-2|GIPR', 'nc|ENSG00000010310|P48546-3|GIPR', 'ENSG00000010310|ENST00000590918|GIPR'] 75969 5945 NLTTHRRVH True H1975_Epitope_Rep3 1132.62137271588 1132.62026993586 27.878 2 -1.0852450197235177 0.3425616259700683 1.0 ['nc|ENSG00000182903|Q8TF20|ZNF721', 'ENSG00000182903|ENST00000511833|ZNF721'] 15789 12840 EDAVRAIAGVS True NCI_RA007_Epitope_Rep1 1086.5669371011797 1086.5658499358601 53.934 2 -1.0853317730758723 0.34259594029234025 1.0 ['EIF3G|p.A294V|1|0.2|ENSG00000130811|chr19:10115545-10115545|G/A|missense_variant'] 61326 24914 LIRITRPP True PC9_epitope_Rep3 964.6181848283999 964.61708993586 101.2 2 -1.0854321567071756 0.3426044289495771 1.0 ['ENST00000481501.1_1_17:27042472-27042902:-|nuORF'] 4367 8773 AILRQWVP True H1975_Epitope_Rep2 981.5759856632499 981.57488993586 38.709 2 -1.085460689805672 0.3426129173875991 1.0 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4'] 141112 9033 YSQTLSLH True PC9_epitope_Rep4 947.4712458111899 947.47014993586 42.318 2 -1.0855233345282636 0.3426214056064147 1.0 ['ENSG00000159708|ENST00000329956|LRRC36', 'nc|ENSG00000159708|Q1X8D7-3|LRRC36', 'nc|ENSG00000159708|Q1X8D7-2|LRRC36'] 99631 20282 SIFNIDFLD True PC9_epitope_Rep2 1082.52842633414 1082.52732993586 83.436 2 -1.0855766854810232 0.34263838138646074 1.0 ['ENSG00000141052|ENST00000425538|MYOCD', 'nc|ENSG00000141052|Q8IZQ8|MYOCD'] 125758 11265 VKTLNDSL True PC9_epitope_Rep1 888.4916469026 888.49054993586 48.211 2 -1.0855922626042285 0.34263838138646074 1.0 ['nc|ENSG00000135205|Q8IYE0-2|CCDC146', 'ENSG00000135205|ENST00000285871|CCDC146'] 101610 7824 SLLQRQTL True PC9_epitope_Rep3 957.56072952193 957.55962993586 35.084 2 -1.0856154217870204 0.3426468689477082 1.0 ['ENSG00000083828|ENST00000396154|ZNF586', 'nc|ENSG00000083828|Q9NXT0-3|ZNF586', 'ENST00000396150.4_1_19:58281140-58291161:+|nuORF'] 8493 7680 ATSALEHTVP True NCI_RA007_Epitope_Rep4 1024.5189242796 1024.5178299358602 36.204 2 -1.0856567766039227 0.34267675463512887 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 7021 7881 AQPFLDTSP True PC9_epitope_Rep5 974.4709114580199 974.46980993586 35.256 2 -1.085719398643727 0.34267675463512887 1.0 ['ENST00000465025.1_1_1:228335125-228336550:+|nuORF'] 80103 12941 PFMYPPYLP True NCI_RA007_Epitope_Rep4 1123.5412399473098 1123.5401499358602 56.868 2 -1.08575798144772 0.342698152427924 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 113364 7355 TLRTAPPPK True H1975_Epitope_Rep1 979.5814649665098 979.58036993586 33.3 2 -1.0857833175538454 0.34270221418888386 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant'] 59698 10264 LGARQASLE True PC9_epitope_Rep3 943.5086939490699 943.50758993586 44.429 2 -1.0858054555218988 0.34270221418888386 1.0 ['PNPLA1|p.R298G|1|0.14|ENSG00000180316|chr6:36301977-36301977|C/G|missense_variant'] 101778 9434 SLNYPENY True H1975_Epitope_Rep3 998.4345259493 998.43342993586 41.289 2 -1.085891488502138 0.3427320965180681 1.0 ['ENSG00000183378|ENST00000533663|OVCH2', 'nc|ENSG00000183378|Q7RTZ1|OVCH2'] 55780 8578 LAMWGLVHSNL True H1975_Epitope_Rep1 1239.6434136000698 1239.64230993586 37.922 2 -1.0859477141416556 0.3427320965180681 1.0 ['ENSG00000156966|ENST00000287590|B3GNT7'] 2623 8657 AESAAYFDY True H1975_Epitope_Rep2 1035.4185415319898 1035.41744993586 38.258 2 -1.085987422860309 0.3427405819928219 1.0 ['nc|ENSG00000131507|Q9BT67-2|NDFIP1', 'ENSG00000131507|ENST00000253814|NDFIP1'] 68468 18639 LTFFSQQI True PC9_epitope_Rep6 982.5123823471799 982.51128993586 84.338 2 -1.086042993685068 0.34277894682485377 1.0 ['nc|ENSG00000152952|O00469-3|PLOD2', 'ENST00000478436.1_1_3:145795570-145803239:-|nuORF'] 113348 16009 TLRRLESRF True NCI_RA007_Epitope_Rep3 1176.6727395823998 1176.6716499358602 70.648 2 -1.0860505839640109 0.34277894682485377 1.0 ['ENSG00000119636|ENST00000394009|BBOF1', 'ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 67778 20736 LSYSEMFMLL True PC9_epitope_Rep5 1232.58211878312 1232.5810299358602 84.819 2 -1.0860586864089528 0.34277894682485377 1.0 ['ENST00000525141.1_11:93212038-93212179:-|nuORF'] 130341 6349 VSKQHRWYLQN True H1975_Epitope_Rep1 1457.7527808082498 1457.7516899358602 29.482 2 -1.0861263144272066 0.34278743125661615 1.0 ['nc|ENSG00000146453|Q8NA58|PNLDC1', 'ENSG00000146453|ENST00000392167|PNLDC1'] 7858 7244 ATAAESLRPSF True H1975_Epitope_Rep3 1148.5825871653199 1148.5814899358602 32.836 2 -1.0862050834917005 0.3428088248583195 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 5924 4682 APGRCRSRFP True H1975_Epitope_Rep3 1145.58763005945 1145.5865299358602 23.133 2 -1.0862713683690965 0.34283021790767326 1.0 ['ENST00000478970.6_1_11:18416236-18416389:+|nuORF'] 141738 7586 YTWRWVWSWEW True PC9_epitope_Rep5 1683.7622828627896 1683.76063490379 34.127 3 -1.0863485762035217 0.3428512418030671 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 82166 5626 PNPGTPALL True H1975_Epitope_Rep3 878.4861675993399 878.48506993586 26.678 2 -1.0863824929495969 0.3428512418030671 1.0 ['ENST00000375980.8_1_1:15755568-15755859:+|nuORF'] 123027 22045 VGILSGLGALP True PC9_epitope_Rep3 995.6015317047498 995.60042993586 90.093 2 -1.0864477357490603 0.3428512418030671 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant'] 133750 14195 VYEEETVDL True PC9_epitope_Rep1 1095.49718577551 1095.49608993586 59.423 2 -1.0864763711507548 0.3428512418030671 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 132288 23747 VTWKIKLR True NCI_RA007_Epitope_Rep4 1042.6651350208197 1042.66402993586 102.96 2 -1.086517428020543 0.34287668934181825 1.0 ['ENSG00000256188|ENST00000539585|TAS2R30', 'ENSG00000212124|ENST00000390673|TAS2R19', 'ENSG00000255837|ENST00000538986|TAS2R20', 'TAS2R20|p.F267Lfs*13|1|0.18|ENSG00000255837|chr12:10997075-10997075|A/-|frameshift_variant'] 27935 24285 FQEFLEKRCP True H1975_Epitope_Rep1 1295.6332428391897 1295.63158490379 100.71 3 -1.0865519763679192 0.34287668934181825 1.0 ['ENSG00000184083|ENST00000375180|FAM120C', 'nc|ENSG00000184083|Q9NX05-2|FAM120C'] 85541 7189 QGDIRLLSDD True PC9_epitope_Rep5 1130.5567663402999 1130.5556699358601 32.617 2 -1.0865686655960627 0.34287668934181825 1.0 ['nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6', 'ACSL6|p.E391Sfs*40|1|0.73|ENSG00000164398|chr5:131972816-131972816|C/-|frameshift_variant', 'nc|ENSG00000164398|Q9UKU0-5|ACSL6', 'nc|ENSG00000164398|Q9UKU0|ACSL6', 'nc|ENSG00000164398|Q9UKU0-9|ACSL6', 'nc|ENSG00000164398|Q9UKU0-6|ACSL6', 'ENSG00000164398|ENST00000651883|ACSL6'] 22660 6410 ETPQTVPA True PC9_epitope_Rep3 841.4181476091699 841.41704993586 29.681 2 -1.0866127364319929 0.34289328308121225 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 7752 13341 ASQPADSATY True H1975_Epitope_Rep2 1009.43525422529 1009.43414993586 56.448 2 -1.0866681872987292 0.34289328308121225 1.0 ['nc|ENSG00000211780|A0A075B6T7|TRAV6'] 132079 7185 VTTPAKNP True H1975_Epitope_Rep3 826.45486747106 826.45376993586 32.612 2 -1.0866720131315695 0.34289328308121225 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 131493 18766 VTKKGSGS True PC9_epitope_Rep6 762.42356734278 762.42246993586 84.823 2 -1.0866961891109788 0.34289328308121225 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 88828 9951 QVAEAVLQPW True H1975_Epitope_Rep3 1139.5975089534697 1139.59640993586 43.31 2 -1.086700534587586 0.34289328308121225 1.0 ['ENST00000588450.1_1_19:2233858-2234300:-|nuORF'] 67359 12162 LSSHPATLHH True H1975_Epitope_Rep1 1098.55704112382 1098.55594993586 51.799 2 -1.086842618596709 0.3429921137886082 1.0 ['ENST00000433619.2_1_X:153740652-153741217:-|nuORF'] 39253 3371 HIINADAKY True NCI_RA007_Epitope_Rep2 1043.53999407735 1043.5388899358602 17.772 2 -1.0869215743961598 0.3430264074963215 1.0 ['ENSG00000153822|ENST00000392671|KCNJ16'] 141561 14477 YTNQRDLDL True PC9_epitope_Rep4 1136.5462016565998 1136.5451099358602 63.596 2 -1.086982985960132 0.34303488687257194 1.0 ['ENST00000331728.8_2_22:31674601-31674808:+|nuORF'] 123934 21009 VGRTRFLRA True PC9_epitope_Rep6 1074.6410455312998 1074.64047496793 93.636 1 -1.086984812191069 0.34304336602994323 1.0 ['ENSG00000196878|ENST00000356082|LAMB3', 'LAMB3|p.T606Pfs*20|1|0.13|ENSG00000196878|chr1:209625808-209625808|T/-|frameshift_variant'] 64088 17024 LPDFQKDDFK True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 70.906 2 -1.087043882499069 0.3430514686903103 1.0 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17', 'nc|ENSG00000152942|O75943-4|RAD17'] 75492 21846 NKLILYKFDR True PC9_epitope_Rep6 1308.7554065772 1308.75376490379 96.932 3 -1.087047351483769 0.3430514686903103 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2', 'IL12RB2|p.R65G|1|0.24|ENSG00000081985|chr1:67321718-67321718|C/G|missense_variant'] 114152 25264 TPKGVKLNKNV True PC9_epitope_Rep2 1196.7241064489199 1196.72300993586 102.85 2 -1.0870618380542083 0.3430514686903103 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 56633 16013 LDIDYMGEEQL True H1975_Epitope_Rep2 1324.58568351008 1324.58458993586 66.793 2 -1.0870809166446411 0.3430514686903103 1.0 ['nc|ENSG00000105048|P13805-2|TNNT1', 'nc|ENSG00000105048|P13805-3|TNNT1', 'ENSG00000105048|ENST00000588981|TNNT1'] 131492 20369 VTKKGSGS True PC9_epitope_Rep4 762.42356734278 762.42246993586 86.494 2 -1.0871061484099411 0.34305994708653287 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 70212 8115 LVQIPIFFFTV True H1975_Epitope_Rep1 1322.7638460025798 1322.76274993586 36.159 2 -1.0871230570605461 0.3430684252639186 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 92680 16844 RNRFKLFLE True H1975_Epitope_Rep3 1221.6982260542497 1221.6965849037902 70.343 3 -1.0871476759971204 0.343076903222476 1.0 ['ATP13A1|p.Y475F|1|0.37|ENSG00000105726|chr19:19655426-19655426|T/A|missense_variant'] 135121 21579 WEELPARVAGR True NCI_RA007_Epitope_Rep1 1282.6782188856598 1282.6771299358602 88.304 2 -1.0871823174401265 0.3430982861862482 1.0 ['ENST00000564806.1_1_16:30036506-30036905:-|nuORF'] 128490 13723 VPSPAPLH True PC9_epitope_Rep1 816.4493881678 816.44828993586 57.634 2 -1.0872137780220734 0.3431196685981236 1.0 ['ENST00000470338.1_1_22:22316666-22317191:-|nuORF'] 124137 9328 VGSRGFARFVE True NCI_RA007_Epitope_Rep5 1223.6411051009497 1223.64000993586 42.522 2 -1.0872159705891211 0.34312814556717 1.0 ['ENST00000355221.7_3_8:54745628-54755835:-|nuORF'] 131314 8027 VTGHQQEPA True H1975_Epitope_Rep1 965.4566583762098 965.45556993586 35.82 2 -1.087428114060446 0.3432612398699221 1.0 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF', 'ENST00000381017.6_1_9:13106966-13119674:-|nuORF'] 85613 16540 QGKAGGPA True NCI_RA007_Epitope_Rep2 684.3554877829599 684.35493496793 69.065 1 -1.0874322117390833 0.3432612398699221 1.0 ['nc|ENSG00000173349|Q587I9|SFT2D3'] 48832 4989 KDVFDDGR True NCI_RA007_Epitope_Rep5 950.4457593393398 950.44466993586 25.894 2 -1.087518120942597 0.3432826190752713 1.0 ['ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF'] 5757 7554 APASRVSSAA True PC9_epitope_Rep1 915.47739382079 915.47628993586 33.874 2 -1.087599137357839 0.3433124717723724 1.0 ['ENST00000531395.1_1_8:11659765-11659999:-|nuORF'] 5279 3951 ALQATEEK True NCI_RA007_Epitope_Rep2 888.4552613938799 888.45416993586 20.006 2 -1.0876272313682953 0.3433124717723724 1.0 ['nc|ENSG00000101004|Q9Y2I6-2|NINL', 'ENSG00000101004|ENST00000278886|NINL', 'ENST00000464285.5_1_20:25434089-25439234:-|nuORF'] 16012 6893 EDSTWERRQD True H1975_Epitope_Rep1 1320.5694562823198 1320.5683499358602 31.554 2 -1.0876628377303206 0.3433371180842279 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7'] 20346 8894 ENWRRFSDQ True H1975_Epitope_Rep1 1236.56358305624 1236.5624899358602 39.115 2 -1.0877127700687026 0.3433371180842279 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1'] 13564 3991 DPDQMKHQWL True H1975_Epitope_Rep3 1296.5921063032 1296.59100993586 20.476 2 -1.0877726874128857 0.3433371180842279 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF'] 102172 15195 SLRSTFSLPE True PC9_epitope_Rep1 1135.58733819259 1135.58624993586 63.268 2 -1.0877880880869237 0.3433371180842279 1.0 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 79843 24164 PEHQRVQQR True PC9_epitope_Rep4 1176.6112019549998 1176.60955490379 101.42 3 -1.087800454307593 0.3433371180842279 1.0 ['nc|ENSG00000157017|Q9UBU3-6|GHRL', 'ENSG00000157017|ENST00000335542|GHRL'] 37437 4002 GVTINVLDEND True H1975_Epitope_Rep2 1187.56699667083 1187.56534490379 20.465 3 -1.08782054214643 0.3433371180842279 1.0 ['ENSG00000156453|ENST00000287008|PCDH1', 'nc|ENSG00000156453|Q08174|PCDH1', 'ENST00000511044.1_1_5:141242715-141245657:-|nuORF'] 7476 6153 ASCRDVPRVE True NCI_RA007_Epitope_Rep5 1130.5502414912198 1130.5491499358602 30.347 2 -1.087856723508489 0.3433371180842279 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 25939 20222 FFTVIFQWLKV True PC9_epitope_Rep2 1426.80129414046 1426.80018993586 83.202 2 -1.0878578465868824 0.3433371180842279 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 36533 7344 GVGRTGVL True PC9_epitope_Rep1 757.4446371405298 757.44354993586 33.061 2 -1.0878594378568676 0.3433371180842279 1.0 ['ENSG00000152104|ENST00000366956|PTPN14'] 16596 6488 EENFLWMPAL True PC9_epitope_Rep5 1248.58489566444 1248.58378993586 29.928 2 -1.0879477268473536 0.34336657678463145 1.0 ['ENST00000360317.7_1_17:38073357-38073465:-|nuORF'] 109589 6607 TDYLMNILT True PC9_epitope_Rep4 1082.53179746242 1082.5307099358602 32.573 2 -1.0879609137661226 0.34336657678463145 1.0 ['ACTG2|p.K192N|1|0.13|ENSG00000163017|chr2:73913609-73913609|G/T|missense_variant'] 88558 14436 QTDGTLTYFDK True H1975_Epitope_Rep2 1287.5982967991097 1287.5971899358601 60.681 2 -1.08797167593203 0.34336657678463145 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'ATP11C|p.T977Lfs*10|1|0.31|ENSG00000101974|chrX:139745767-139745767|C/-|frameshift_variant'] 5339 3240 ALRLRKKSEKK True NCI_RA007_Epitope_Rep1 1355.8725020181098 1355.87086490379 16.497 3 -1.0880230121840708 0.34336657678463145 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO'] 85679 8718 QGSGASRDP True PC9_epitope_Rep2 873.39405811965 873.39296993586 38.895 2 -1.0880373762749391 0.34336657678463145 1.0 ['ENST00000349155.6_3_12:115121317-115121416:-|nuORF'] 52752 24292 KNATPGKN True PC9_epitope_Rep4 828.44536541652 828.44426993586 101.92 2 -1.0880631928184177 0.3433750483808541 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 56908 10815 LDQARSSREL True H1975_Epitope_Rep1 1173.61019889549 1173.60910993586 46.563 2 -1.0880807922346003 0.3433835197584859 1.0 ['ENSG00000072315|ENST00000262839|TRPC5'] 109217 6997 TARIWQYQQQ True NCI_RA007_Epitope_Rep5 1320.65748344108 1320.65638993586 33.594 2 -1.0882026846137363 0.3433916016254918 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3'] 126164 11368 VLFHQKKN True PC9_epitope_Rep6 1012.5817993196799 1012.58070993586 54.773 2 -1.0882033823508106 0.3433916016254918 1.0 ['ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 80208 14337 PFYWTWESFL True H1975_Epitope_Rep1 1374.6284747285797 1374.62736993586 60.337 2 -1.0882235349919405 0.3433916016254918 1.0 ['ENST00000415822.6_2_3:158538073-158539436:+|nuORF'] 14575 7395 DTVLSAAAL True PC9_epitope_Rep1 859.4650978015899 859.46400993586 33.258 2 -1.0882315614727556 0.3433916016254918 1.0 ['nc|ENSG00000078618|O43847-2|NRDC'] 61625 23596 LKNEQEGPWA True PC9_epitope_Rep4 1170.5669371011797 1170.56530490379 99.069 3 -1.0883411241760652 0.3434000722431498 1.0 ['FIGLA|p.E170Q|1|0.04|ENSG00000183733|chr2:70785516-70785516|C/G|missense_variant'] 46485 6921 ISVLEGVP True NCI_RA007_Epitope_Rep1 812.4643695255999 812.46326993586 30.925 2 -1.0884149125211282 0.3434214430383013 1.0 ['ENSG00000164062|ENST00000296456|APEH'] 111603 11675 TIDELEELYA True PC9_epitope_Rep5 1194.5655996885 1194.56395490379 49.904 3 -1.0884531550312606 0.34343395252837977 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 10399 4223 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 21.315 2 -1.0884588182499222 0.34343395252837977 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 46734 15203 ITELCRDMF True H1975_Epitope_Rep3 1126.51510185246 1126.51400993586 63.881 2 -1.0884720546860307 0.34343395252837977 1.0 ['ENSG00000196072|ENST00000370372|BLOC1S2'] 5249 9448 ALPPRLECLFP True NCI_RA007_Epitope_Rep1 1254.6794647556198 1254.67836993586 40.744 2 -1.0884906645308534 0.34344646105026894 1.0 ['nc|ENSG00000180846|Q8NCQ2|CSNK1G2-AS1'] 79622 10052 PDLSWLKN True H1975_Epitope_Rep1 971.5076313199099 971.50652993586 43.604 2 -1.0884986991305339 0.34344646105026894 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant'] 77859 12538 NVELISQYNGY True NCI_RA007_Epitope_Rep1 1298.6142812164198 1298.6131899358602 52.749 2 -1.0885454584780636 0.34344646105026894 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 75954 11964 NLTALGLNL True PC9_epitope_Rep4 927.5389314481899 927.53782993586 53.813 2 -1.0886080599812786 0.3434678293173727 1.0 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000488712.5_1_2:216176805-216189903:+|nuORF', 'ENST00000427397.5_1_2:216176945-216197107:+|nuORF'] 97475 11444 SEEFRQVM True PC9_epitope_Rep1 1024.4647805317597 1024.4636899358602 48.897 2 -1.0887413468487432 0.34351499516285067 1.0 ['ENSG00000135047|ENST00000343150|CTSL', 'nc|ENSG00000135047|P07711-3|CTSL'] 19189 5805 ELHTFWQF True PC9_epitope_Rep5 1106.5185303567798 1106.51742993586 27.322 2 -1.088825603842613 0.3435706270073652 1.0 ['nc|ENSG00000173950|Q8NBI6-3|XXYLT1'] 98734 22458 SGGGGGGGGD True PC9_epitope_Rep6 676.24124587636 676.24069496793 99.38 1 -1.0888336788215478 0.3435706270073652 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1'] 65979 11618 LSDWKIQL True PC9_epitope_Rep5 1001.5545815123298 1001.55348993586 49.684 2 -1.0888654772923714 0.34360489113610565 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'nc|ENSG00000163617|Q8NCU4-2|CCDC191', 'ENST00000460813.5_1_3:113723412-113755878:-|nuORF'] 105732 8521 SSFLRRLYEEE True NCI_RA007_Epitope_Rep5 1427.7044932031502 1427.70338993586 39.459 2 -1.0889048004223458 0.34362625598163266 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386'] 20546 10832 EPRLTLGL True NCI_RA007_Epitope_Rep4 897.5283667644899 897.52726993586 48.517 2 -1.088924381994835 0.3436472211832381 1.0 ['nc|ENSG00000285253|Q6N043-4|ZNF280D'] 116009 14581 TSLKDYIKA True PC9_epitope_Rep5 1037.57571087973 1037.57460993586 61.087 2 -1.0889606885805085 0.3436472211832381 1.0 ['nc|ENSG00000122884|P13674-3|P4HA1', 'nc|ENSG00000122884|P13674-2|P4HA1', 'ENSG00000122884|ENST00000394890|P4HA1'] 90311 9721 REEWERQYSRQ True NCI_RA007_Epitope_Rep3 1565.7335019156499 1565.73240993586 45.308 2 -1.0889610901611197 0.3436472211832381 1.0 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'ENST00000587472.5_1_19:45572450-45574100:+|nuORF', 'ENST00000592876.1_1_19:45573154-45573820:+|nuORF', 'ENST00000588070.1_1_19:45573154-45574100:+|nuORF', 'ENST00000391952.7_1_19:45571280-45574100:+|nuORF', 'ENST00000585615.5_1_19:45571485-45574100:+|nuORF', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion'] 75434 9179 NIVTGTDEQ True NCI_RA007_Epitope_Rep4 975.4509042894299 975.44980993586 42.147 2 -1.0889904227767835 0.3436472211832381 1.0 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62750240-62754721:-|nuORF', 'ENSG00000185467|ENST00000327442|KPNA7', 'ENSG00000186432|ENST00000334256|KPNA4', 'ENSG00000102753|ENST00000261667|KPNA3'] 38622 11567 HFFHEDEEP True PC9_epitope_Rep1 1185.47270236317 1185.4716099358602 49.372 2 -1.088995101009628 0.34365568653751905 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 18822 16573 ELDLRGYKIP True PC9_epitope_Rep1 1202.66592286646 1202.66482993586 68.571 2 -1.0890053851477948 0.3436641516734378 1.0 ['ENST00000395613.2_1_22:51193627-51193861:-|nuORF', 'ENST00000558020.1_1_15:101828356-101835383:-|nuORF', 'ENST00000560856.5_1_15:101827905-101835383:-|nuORF', 'ENST00000558036.5_1_15:101827046-101835383:-|nuORF', 'ENSG00000131876|ENST00000254193|SNRPA1'] 70517 7426 LVWDSEHSD True PC9_epitope_Rep5 1086.4618033263 1086.4607099358602 33.519 2 -1.0890333783291992 0.3436726165910029 1.0 ['ENSG00000145390|ENST00000692078|USP53'] 102785 568 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 3.1065 2 -1.0890684304594835 0.3437024426732699 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 141495 22373 YTKMCNCTQF True PC9_epitope_Rep2 1237.49298650889 1237.4918899358602 91.55 2 -1.0890740601640643 0.3437024426732699 1.0 ['ENST00000495123.5_1_2:159519810-159525751:+|nuORF'] 101092 12936 SLGILIFVLIE True H1975_Epitope_Rep1 1215.74786158527 1215.7467699358601 54.834 2 -1.089154404512944 0.34374959697700513 1.0 ['IMPG2|p.I1076Ffs*25|1|0.53|ENSG00000081148|chr3:101232789-101232789|G/-|frameshift_variant', 'ENSG00000081148|ENST00000193391|IMPG2', 'IMPG2|p.G283Wfs*12|1|0.27|ENSG00000081148|chr3:101269555-101269556|-/A|frameshift_variant', 'IMPG2|p.S423Qfs*36|1|0.13|ENSG00000081148|chr3:101246079-101246079|G/-|frameshift_variant'] 29958 15359 FWKRHFCRYKK True NCI_RA007_Epitope_Rep2 1597.84524172445 1597.84414993586 64.441 2 -1.0892140406124529 0.3437576570418993 1.0 ['ENST00000489708.1_1_7:33545204-33545258:+|nuORF'] 23245 9144 EVNQEKIYM True H1975_Epitope_Rep2 1152.54851015572 1152.54740993586 40.124 2 -1.089249740723994 0.3437576570418993 1.0 ['MMAB|p.G232V|1|0.6|ENSG00000139428|chr12:109557086-109557086|C/A|missense_variant'] 123034 10382 VGIRRICAYNP True NCI_RA007_Epitope_Rep2 1260.6761107106797 1260.67500993586 44.975 2 -1.0892791796883023 0.3437576570418993 1.0 ['ENST00000394919.5_1_10:73856875-73857049:-|nuORF'] 22204 10554 ESVVQVRMDP True NCI_RA007_Epitope_Rep1 1158.57030822946 1158.56920993586 45.036 2 -1.0892960758261134 0.3437576570418993 1.0 ['ENST00000489805.5_1_6:10411961-10412090:-|nuORF'] 38769 21899 HGSTLHRNIL True PC9_epitope_Rep6 1146.6257893899801 1146.62413490379 97.136 3 -1.0893182739847962 0.343766119880326 1.0 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'ENST00000505061.5_1_15:42105116-42107966:+|nuORF', 'nc|ENSG00000137802|O60336-2|MAPKBP1', 'nc|ENSG00000137802|O60336-3|MAPKBP1'] 116038 6589 TSNIRSGKNI True H1975_Epitope_Rep3 1088.59382055536 1088.59272993586 30.298 2 -1.0893640374387763 0.34378707381234846 1.0 ['ENSG00000110318|ENST00000263468|CEP126'] 87267 5342 QPNPNLNV True NCI_RA007_Epitope_Rep3 894.45593010022 894.45482993586 28.021 2 -1.0893768121828866 0.34378707381234846 1.0 ['SPAG16|p.D321H|1|0.14|ENSG00000144451|chr2:213489981-213489981|G/C|missense_variant', 'ENST00000452556.5_1_2:214162070-215102915:+|nuORF', 'nc|ENSG00000144451|Q8N0X2-2|SPAG16', 'ENSG00000144451|ENST00000331683|SPAG16'] 47026 16215 ITREKSLDLP True PC9_epitope_Rep1 1170.6608374860198 1170.6597499358602 67.188 2 -1.0893791375050557 0.34378707381234846 1.0 ['nc|ENSG00000198010|Q9P1A6-3|DLGAP2', 'nc|ENSG00000198010|Q9P1A6-2|DLGAP2', 'nc|ENSG00000198010|Q9P1A6|DLGAP2', 'ENSG00000198010|ENST00000637795|DLGAP2'] 107785 12745 SVTFNLAHL True PC9_epitope_Rep5 1000.5341804209199 1000.53308993586 54.03 2 -1.0894064576062041 0.34378707381234846 1.0 ['ENST00000496342.1_1_22:29656732-29660364:-|nuORF'] 18205 15837 EILYRNKL True PC9_epitope_Rep5 1047.60767971435 1047.60658993586 65.908 2 -1.0894437627011064 0.3437955357257992 1.0 ['PDZD8|p.I1116*|1|0.13|ENSG00000165650|chr10:117283387-117283387|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 22692 5518 ETRAAPLPGL True H1975_Epitope_Rep3 1023.5712942056298 1023.57018993586 26.272 2 -1.089488954004415 0.3438039974210187 1.0 ['ENST00000606557.1_1_20:17948856-17948946:-|nuORF', 'ENST00000481323.1_1_20:17948856-17949358:-|nuORF', 'ENST00000486039.1_1_20:17948856-17949322:-|nuORF'] 35309 15542 GRLWLNTWCVP True PC9_epitope_Rep4 1343.68086173795 1343.6797699358601 67.706 2 -1.0895547397800638 0.3438124588980155 1.0 ['ENST00000507493.1_1_4:515710-515999:+|nuORF'] 3684 17115 AGQVEVVRCL True PC9_epitope_Rep1 1072.56991430664 1072.5688099358601 70.658 2 -1.0895612871284168 0.3438164867896793 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ANK2|p.Q1178Rfs*17|1|0.18|ENSG00000145362|chr4:113335995-113335995|C/-|frameshift_variant', 'ANK2|p.A1187Hfs*8|1|0.1|ENSG00000145362|chr4:113336021-113336021|G/-|frameshift_variant'] 39982 13908 HPLNAGHF True PC9_epitope_Rep5 891.43513508599 891.4340299358599 58.517 2 -1.0896155317559508 0.3438164867896793 1.0 ['USPL1|p.A392G|1|0.33|ENSG00000132952|chr13:30646994-30646994|C/G|missense_variant'] 102784 505 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 2.7679 2 -1.0897152192209427 0.3438249477783222 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 46748 10854 ITENPPSR True PC9_epitope_Rep1 912.46649478392 912.46538993586 46.636 2 -1.0897644725791449 0.3438676569188715 1.0 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210', 'KIAA1210|p.A1218Hfs*41|1|0.33|ENSG00000250423|chrX:119087578-119087578|C/-|frameshift_variant', 'KIAA1210|p.E900*|1|0.52|ENSG00000250423|chrX:119088532-119088533|-/A|frameshift_variant'] 133210 25668 VVSFIKPLA True NCI_RA007_Epitope_Rep1 972.6008034287598 972.60025496793 106.24 1 -1.0897744099648552 0.3438676569188715 1.0 ['ENST00000400000.6_1_18:9955494-9955929:+|nuORF'] 80059 20771 PFKIKWFK True H1975_Epitope_Rep2 1092.64842232752 1092.6473299358602 86.01 2 -1.089862851593595 0.3439019044057919 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 99708 9320 SIHLQRWDKYS True NCI_RA007_Epitope_Rep2 1431.7258973540702 1431.72480993586 40.86 2 -1.0898796339637122 0.3439059296793409 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 94937 14921 RTHYSELTTL True PC9_epitope_Rep6 1219.61970095003 1219.6186099358601 69.391 2 -1.0899038161772725 0.3439059296793409 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 86909 18702 QLSKVLLNLK True PC9_epitope_Rep5 1154.7386938839 1154.7375899358601 76.955 2 -1.0899324284363907 0.34392687234892927 1.0 ['nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 86793 18474 QLNFIENPV True PC9_epitope_Rep4 1072.55530978832 1072.5542099358602 79.131 2 -1.0899443595047011 0.34392687234892927 1.0 ['ENSG00000115221|ENST00000283249|ITGB6', 'nc|ENSG00000115221|P18564-2|ITGB6', 'ITGB6|p.S280Tfs*3|1|0.22|ENSG00000115221|chr2:160172651-160172651|C/-|frameshift_variant'] 83613 14357 PVDHLHLPPT True PC9_epitope_Rep3 1124.5978433066398 1124.5961849037901 60.315 3 -1.089950188179527 0.34392687234892927 1.0 ['nc|ENSG00000182158|Q70SY1-2|CREB3L2', 'ENSG00000182158|ENST00000330387|CREB3L2'] 125682 25543 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 103.53 2 -1.089954031484873 0.34392687234892927 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 100807 3799 SLEIMTLQPRC True H1975_Epitope_Rep2 1289.64717865117 1289.6455349037901 19.629 3 -1.0899945797882147 0.3439308966673113 1.0 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000581509.1_1_17:27210105-27216012:-|nuORF'] 130944 9471 VTDKLENFHQY True H1975_Epitope_Rep3 1392.66737941844 1392.66628993586 41.434 2 -1.0899993063615898 0.3439308966673113 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 125683 25620 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 103.88 2 -1.0900134997773203 0.34393492077816595 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 247 19485 AAGAPNLVLAA True PC9_epitope_Rep5 966.5498304850599 966.54928496793 80.002 1 -1.090014805368653 0.34393492077816595 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 139519 14828 YLSPTFKEF True NCI_RA007_Epitope_Rep3 1130.56481184286 1130.56370993586 65.754 2 -1.0900711271591266 0.3439562706270627 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 35434 6099 GSGGSAHCT True NCI_RA007_Epitope_Rep5 775.2919015502301 775.29135496793 30.141 1 -1.0901976069312773 0.3439945340397829 1.0 ['ENST00000584377.5_1_17:80211530-80212190:-|nuORF'] 1583 12613 AEEYDEKTS True PC9_epitope_Rep5 1070.44039917538 1070.4393099358601 53.518 2 -1.090204243958608 0.3439945340397829 1.0 ['ENST00000470165.1_1_10:103347123-103356393:+|nuORF', 'ENSG00000166171|ENST00000370151|DPCD'] 121339 7277 VEVEHHGRMLK True H1975_Epitope_Rep3 1333.69248905081 1333.6913899358601 32.965 2 -1.0902175874532685 0.3439945340397829 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2', 'HIVEP2|p.N1055Ifs*49|1|0.65|ENSG00000010818|chr6:142771577-142771577|C/-|frameshift_variant'] 135560 25521 WKVGVTAL True PC9_epitope_Rep2 872.51198842436 872.5114349679301 103.85 1 -1.0902937435248143 0.3440287732687052 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 59880 16719 LGGCHGGR True H1975_Epitope_Rep3 755.3496912098699 755.3491449679301 69.837 1 -1.0903020442986067 0.34405012053162826 1.0 ['ENST00000560486.2_1_15:100797173-100802589:-|nuORF'] 99561 6853 SIEGSETTTVS True H1975_Epitope_Rep2 1109.50881308837 1109.50770993586 31.278 2 -1.0903103927468933 0.3440541411537222 1.0 ['ENSG00000261272|ENST00000561890|MUC22'] 66696 12238 LSLDLHDI True PC9_epitope_Rep6 924.4916469026 924.49054993586 58.45 2 -1.0903489361041665 0.3440541411537222 1.0 ['SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion', 'nc|ENSG00000001617|Q13275-2|SEMA3F', 'ENSG00000001617|ENST00000002829|SEMA3F'] 46775 7066 ITFLMIAKP True H1975_Epitope_Rep3 1032.6041745570399 1032.60306993586 32.147 2 -1.0904072013322044 0.3440577468419696 1.0 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 16608 4783 EEPDPFYYDYN True NCI_RA007_Epitope_Rep1 1450.55649155678 1450.5553899358601 22.685 2 -1.0904523139257019 0.3440577468419696 1.0 ['ENSG00000221946|ENST00000270310|FXYD7'] 10390 4193 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 21.025 2 -1.0904584859299682 0.3440577468419696 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 128983 19272 VQLAQKEQELA True PC9_epitope_Rep4 1255.67721582615 1255.67610993586 82.234 2 -1.090461444845295 0.3440577468419696 1.0 ['nc|ENSG00000189337|Q674X7-4|KAZN', 'nc|ENSG00000189337|Q674X7-3|KAZN', 'nc|ENSG00000189337|Q674X7-5|KAZN', 'nc|ENSG00000189337|Q674X7-2|KAZN', 'ENST00000491547.1_1_1:14925349-15387014:+|nuORF', 'ENSG00000189337|ENST00000376030|KAZN'] 120055 5894 VDSSNYMPQLF True NCI_RA007_Epitope_Rep3 1299.58053855999 1299.57944993586 30.16 2 -1.0904837087252208 0.3440577468419696 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3', 'ENSG00000182621|ENST00000338037|PLCB1', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1'] 20146 13209 ENDMFFNVI True PC9_epitope_Rep4 1127.49574630687 1127.49464993586 58.706 2 -1.0905066688627107 0.34406176690469437 1.0 ['ENSG00000102595|ENST00000376747|UGGT2', 'ENST00000463054.1_1_13:96529939-96547453:-|nuORF'] 10397 3940 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 20.235 2 -1.0905218184341396 0.34406176690469437 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 80976 10251 PIHCFDYEVK True PC9_epitope_Rep5 1249.58014463717 1249.5790499358602 44.418 2 -1.0905410379589535 0.3440702215691582 1.0 ['nc|ENSG00000091181|Q01344-3|IL5RA', 'nc|ENSG00000091181|Q01344-2|IL5RA', 'nc|ENSG00000091181|Q01344-4|IL5RA', 'ENSG00000091181|ENST00000446632|IL5RA'] 120340 15050 VEEEELRWRRG True H1975_Epitope_Rep3 1457.7375246669296 1457.73642993586 63.284 2 -1.090652686280045 0.3440774296650471 1.0 ['ENST00000376806.9_1_6:29912373-29912839:+|nuORF'] 130728 14764 VSVRRKRQV True H1975_Epitope_Rep2 1126.70470841702 1126.7036099358602 61.948 2 -1.0906542202978335 0.3440774296650471 1.0 ['PRSS35|p.E292Nfs*15|1|0.09|ENSG00000146250|chr6:83524314-83524314|G/-|frameshift_variant', 'ENSG00000146250|ENST00000369700|PRSS35'] 2088 11570 AELEQRPQP True PC9_epitope_Rep1 1066.5407223533398 1066.5396299358601 49.383 2 -1.0906781462179076 0.3440774296650471 1.0 ['nc|ENSG00000163072|Q8IVI9-3|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-2|NOSTRIN', 'ENSG00000163072|ENST00000317647|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-4|NOSTRIN', 'ENST00000472260.1_1_2:169713171-169721477:+|nuORF'] 5144 20519 ALLQAHPFL True PC9_epitope_Rep1 1008.5756513100799 1008.57454993586 83.738 2 -1.0906871561835774 0.3440774296650471 1.0 ['nc|ENSG00000164483|Q8N6K7-2|SAMD3', 'ENST00000533296.5_1_6:130497274-130536439:-|nuORF', 'ENST00000524930.1_1_6:130504375-130535627:-|nuORF', 'ENSG00000164483|ENST00000439090|SAMD3', 'nc|ENSG00000164483|Q8N6K7-3|SAMD3'] 92546 24848 RMKKIKRQ True PC9_epitope_Rep2 1086.6808021682998 1086.67970993586 101.26 2 -1.0906990811512962 0.3440774296650471 1.0 ['ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'ENST00000428400.5_1_X:47082893-47085639:+|nuORF', 'ENSG00000102225|ENST00000357227|CDK16', 'nc|ENSG00000102225|Q00536-3|CDK16', 'nc|ENSG00000102225|Q00536-2|CDK16'] 125685 26508 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 107.94 2 -1.090703331969709 0.3440774296650471 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant'] 37617 12839 GVVTSHLSV True PC9_epitope_Rep5 897.4919812557699 897.49088993586 54.395 2 -1.090705103357966 0.3440774296650471 1.0 ['ENST00000480456.5_1_21:27087792-27087933:+|nuORF'] 87024 7433 QMRRKHYYRSY True NCI_RA007_Epitope_Rep1 1586.78884904714 1586.78719490379 32.91 3 -1.0907589464965768 0.3440774296650471 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 55739 6543 LALQLSRHNKQ True PC9_epitope_Rep1 1306.74696715182 1306.7458699358601 29.972 2 -1.090828788827354 0.3440774296650471 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 133372 23929 VVVGVGLIVG True NCI_RA007_Epitope_Rep4 910.5851533646199 910.5846049679301 103.77 1 -1.090838684502741 0.3440774296650471 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 12959 13407 DLLFRFMNFLK True NCI_RA007_Epitope_Rep2 1442.77442776962 1442.7733299358601 56.792 2 -1.0908744303911257 0.3440987705234941 1.0 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14', 'SNX14|p.F372Lfs*45|1|0.19|ENSG00000135317|chr6:85543753-85543753|A/-|frameshift_variant'] 126760 27030 VLPGKKKKKT True PC9_epitope_Rep3 1125.75976368165 1125.75811490379 111.18 3 -1.0909146459146624 0.3441072234035698 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 133371 24017 VVVGVGLIVG True NCI_RA007_Epitope_Rep3 910.5851533646199 910.5846049679301 104.03 1 -1.0909400642327638 0.3441156760657766 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 135794 17259 WNAFRKDLCP True NCI_RA007_Epitope_Rep4 1248.6073624445198 1248.60571490379 74.734 3 -1.0910184900762188 0.3441196938065414 1.0 ['ENST00000458001.2_1_13:114545557-114545857:+|nuORF'] 123745 9593 VGRGYASP True PC9_epitope_Rep2 805.4082516318099 805.40714993586 42.244 2 -1.0910440945883197 0.3441196938065414 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 127721 13350 VPAPSLSAP True PC9_epitope_Rep3 837.45961849833 837.4590749679301 56.385 1 -1.0910652036460675 0.3441237113402062 1.0 ['ENST00000294256.12_2_11:64895574-64895820:-|nuORF'] 122613 16353 VGFQKNLL True PC9_epitope_Rep5 917.5334521449298 917.53234993586 67.899 2 -1.0910746672978564 0.3441237113402062 1.0 ['ENST00000432587.6_1_1:168014203-168014425:+|nuORF'] 117913 21899 TWRWPWLRWWQ True H1975_Epitope_Rep1 1699.8524352798697 1699.8513299358601 91.083 2 -1.0911056198298401 0.344132163245319 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 56554 13962 LDGPYFHPV True PC9_epitope_Rep3 1043.50763131991 1043.50652993586 58.78 2 -1.091142302752913 0.3441361803023079 1.0 ['FER1L6|p.G1497V|1|0.16|ENSG00000214814|chr8:124091521-124091521|G/T|missense_variant'] 125621 4891 VKKPIIGILM True PC9_epitope_Rep5 1110.71987301562 1110.71876993586 23.854 2 -1.091168054225523 0.3441361803023079 1.0 ['GGH|p.A31V|1|0.38|ENSG00000137563|chr8:63038677-63038677|G/A|missense_variant'] 84720 5725 QDREGRAVPQW True NCI_RA007_Epitope_Rep4 1340.6585460702397 1340.65744993586 28.634 2 -1.0911985859898374 0.34414019715224536 1.0 ['ENST00000356742.9_1_12:111125990-111126236:-|nuORF'] 4420 10456 AIQEYLKAK True PC9_epitope_Rep1 1062.60734536118 1062.6062499358602 45.106 2 -1.091204975090117 0.34414019715224536 1.0 ['ENSG00000196422|ENST00000356818|PPP1R26', 'PPP1R26|p.L1109Cfs*45|1|0.24|ENSG00000196422|chr9:135487831-135487831|G/-|frameshift_variant'] 21294 9586 EREEQQQHRQE True NCI_RA007_Epitope_Rep1 1495.67638096235 1495.67528993586 41.286 2 -1.0914768557428363 0.3442001907069041 1.0 ['TCHH|p.L1478Q|1|0.16|ENSG00000159450|chr1:152108784-152108784|A/T|missense_variant'] 18279 19399 EIRELLSRNLY True H1975_Epitope_Rep1 1404.7725131933198 1404.7714099358602 80.799 2 -1.0915532171805997 0.34424729727988457 1.0 ['ENSG00000115616|ENST00000233969|SLC9A2'] 55923 12366 LARAKFIP True PC9_epitope_Rep1 914.5701720068199 914.5690699358599 52.424 2 -1.0916090154729556 0.3442557468302237 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3', 'nc|ENSG00000103472|A6NIE6|RRN3P2', 'ENST00000564580.5_1_16:29086353-29108616:+|nuORF', 'ENST00000551766.5_1_16:22437686-22447115:-|nuORF', 'ENST00000569045.1_1_16:22376319-22447115:-|nuORF'] 56424 12914 LDEFLVKN True PC9_epitope_Rep2 976.5229470308799 976.52184993586 54.97 2 -1.0916716504212807 0.34427264527767043 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000496360.5_1_1:39934274-39950491:+|nuORF', 'ENST00000497807.1_1_1:39934322-39950491:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 105549 25658 SSDDDDDDDD True H1975_Epitope_Rep3 1112.29016568288 1112.2890699358602 106.79 2 -1.0917024934959445 0.34427264527767043 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 10388 4011 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 20.331 2 -1.0917841545668634 0.34430686371777197 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 35915 12296 GTRMYEYKKI True PC9_epitope_Rep5 1287.6645429674697 1287.66289490379 52.287 3 -1.0918135475127262 0.3443366446342752 1.0 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 39251 15924 HIIIKPVGLG True PC9_epitope_Rep6 1045.66480066765 1045.6637099358602 73.539 2 -1.0918409153860211 0.3443366446342752 1.0 ['ENSG00000115221|ENST00000283249|ITGB6', 'nc|ENSG00000115221|P18564-2|ITGB6'] 7696 3475 ASLTIWKKMG True NCI_RA007_Epitope_Rep2 1133.6267009067699 1133.62504490379 18.173 3 -1.0918518246416575 0.3443450923802407 1.0 ['nc|ENSG00000087088|Q07812-6|BAX', 'nc|ENSG00000087088|Q07812-4|BAX', 'nc|ENSG00000087088|Q07812-7|BAX', 'nc|ENSG00000087088|Q07812-8|BAX', 'ENST00000513545.5_1_19:49458896-49464890:+|nuORF', 'ENSG00000087088|ENST00000345358|BAX'] 88775 6047 QTQPPCSIW True H1975_Epitope_Rep3 1058.48551597634 1058.4844099358602 28.273 2 -1.0918573513765941 0.3443531139684094 1.0 ['ENST00000491617.5_1_3:149459348-149459438:-|nuORF'] 87702 18796 QRAAPWWAPAW True PC9_epitope_Rep4 1338.6621748987 1338.66106993586 80.385 2 -1.091891424662401 0.3443531139684094 1.0 ['ENST00000244565.7_1_6:41000663-41001646:-|nuORF'] 10396 3749 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 19.505 2 -1.0919162537438423 0.3443531139684094 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 135329 24090 WGHRGARRRR True PC9_epitope_Rep4 1306.7343858358597 1306.73328993586 101.16 2 -1.0919496846160497 0.3443531139684094 1.0 ['ENST00000358752.3_1_11:94277417-94277780:+|nuORF'] 87268 5767 QPNPNLNV True NCI_RA007_Epitope_Rep4 894.45593010022 894.45482993586 28.802 2 -1.0919826543955191 0.3443744444014996 1.0 ['SPAG16|p.D321H|1|0.14|ENSG00000144451|chr2:213489981-213489981|G/C|missense_variant', 'ENST00000452556.5_1_2:214162070-215102915:+|nuORF', 'nc|ENSG00000144451|Q8N0X2-2|SPAG16', 'ENSG00000144451|ENST00000331683|SPAG16'] 22726 10388 ETSPREAVT True PC9_epitope_Rep1 988.48253877088 988.48144993586 44.84 2 -1.0920978795976326 0.3444468778583667 1.0 ['ENST00000588387.1_1_19:14265998-14266202:+|nuORF'] 85934 6732 QHHPPGPT True PC9_epitope_Rep3 869.41439964141 869.41330993586 30.918 2 -1.0921299105062692 0.3444468778583667 1.0 ['ENST00000538448.5_1_20:30689318-30689537:+|nuORF'] 45266 21492 IPVFIAMIQ True PC9_epitope_Rep6 1030.5885244929 1030.5874299358602 95.542 2 -1.0921497771292858 0.3444468778583667 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'BTF3L4-INADL|1|fusion', 'ENST00000472512.2_1_1:62586792-62593784:+|nuORF'] 38287 17869 HEFALNGNPKN True PC9_epitope_Rep2 1239.5996342117899 1239.5979749037901 74.036 3 -1.0921521555120206 0.3444468778583667 1.0 ['CPNE8|p.Q386K|1|0.06|ENSG00000139117|chr12:38685605-38685605|G/T|missense_variant'] 129029 12412 VQMKHLLR True PC9_epitope_Rep1 1023.6011548652698 1023.60004993586 52.605 2 -1.0922099933672766 0.34446820570957437 1.0 ['ENSG00000131697|ENST00000378156|NPHP4', 'nc|ENSG00000131697|O75161-2|NPHP4'] 100738 12844 SLDVTFYWTLK True H1975_Epitope_Rep3 1371.7074533252696 1371.70634993586 54.626 2 -1.0922454777256068 0.34448953301127216 1.0 ['ENST00000528727.5_1_11:99426939-100095567:+|nuORF', 'CNTN5|p.T768Kfs*13|1|0.39|ENSG00000149972|chr11:100271230-100271230|C/-|frameshift_variant', 'nc|ENSG00000149972|O94779-4|CNTN5', 'CNTN5|p.W914Gfs*24|1|0.46|ENSG00000149972|chr11:100340472-100340472|T/-|frameshift_variant', 'nc|ENSG00000149972|O94779-2|CNTN5', 'ENSG00000149972|ENST00000524871|CNTN5'] 10391 3663 CGMWLGVI True PC9_epitope_Rep4 877.4190166396498 877.41790993586 20.213 2 -1.0922666037793922 0.34450198382027103 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 112829 16214 TLIPILST True H1975_Epitope_Rep2 856.5269697821601 856.52586993586 67.576 2 -1.0922676664722462 0.34450198382027103 1.0 ['ENSG00000109084|ENST00000226230|TMEM97'] 105553 24915 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 107.72 2 -1.0922918890521156 0.34450198382027103 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 10503 7313 CKFMIMAYDRY True H1975_Epitope_Rep1 1439.6399850957498 1439.63888993586 33.136 2 -1.0924956390199518 0.34455664897727856 1.0 ['OR56A5|p.T117K|1|0.64|ENSG00000188691|chr11:5968145-5968145|G/T|missense_variant'] 92679 10244 RNREITKIKRE True NCI_RA007_Epitope_Rep1 1441.84774382225 1441.8460949037901 43.858 3 -1.0925197632786572 0.34455664897727856 1.0 ['USP25|p.R413K|1|0.14|ENSG00000155313|chr21:15824995-15824995|G/A|missense_variant'] 14932 10334 DYEATRLEGLP True H1975_Epitope_Rep1 1262.6142812164198 1262.6131899358602 44.697 2 -1.0925433164778442 0.34455664897727856 1.0 ['nc|ENSG00000102103|O60828-8|PQBP1', 'nc|ENSG00000102103|O60828-10|PQBP1', 'nc|ENSG00000102103|O60828-9|PQBP1', 'ENST00000486150.5_1_X:48755780-48758817:+|nuORF', 'nc|ENSG00000102103|O60828-7|PQBP1', 'nc|ENSG00000102103|O60828-6|PQBP1', 'ENST00000470062.5_1_X:48755362-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-5|PQBP1', 'nc|ENSG00000102103|O60828-4|PQBP1', 'ENST00000472742.5_1_X:48755271-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-3|PQBP1', 'nc|ENSG00000102103|O60828-2|PQBP1', 'ENSG00000102103|ENST00000447146|PQBP1'] 15646 6975 EATASKVIV True H1975_Epitope_Rep3 916.52294703088 916.52184993586 31.791 2 -1.0926679523526197 0.34455664897727856 1.0 ['ENSG00000132182|ENST00000254508|NUP210'] 123743 17136 VGRGRLWKPL True PC9_epitope_Rep5 1180.719295852 1180.7176649037901 70.935 3 -1.0926718523617116 0.34455664897727856 1.0 ['ENST00000602414.5_1_4:119199981-119200098:+|nuORF'] 57851 18821 LEEYAATL True NCI_RA007_Epitope_Rep1 908.4491133842799 908.4485649679301 77.354 1 -1.0926777367744986 0.34455664897727856 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 135770 3155 WMKGVGWL True PC9_epitope_Rep3 975.5000438416698 975.49894993586 17.136 2 -1.0926874280064283 0.34455664897727856 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 36736 6940 GVKGAKIK True PC9_epitope_Rep2 799.5279728416699 799.52686993586 32.095 2 -1.092701430519507 0.34455664897727856 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 18599 3502 EKRMEEWDRYP True NCI_RA007_Epitope_Rep2 1537.6983622768898 1537.69672490379 18.273 3 -1.0927617407172106 0.34456909542884373 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 25207 21114 FDDPYALVV True PC9_epitope_Rep6 1037.5069626135698 1037.5058699358601 94.052 2 -1.0927652053522063 0.34456909542884373 1.0 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF'] 69058 17755 LTQMFFLH True PC9_epitope_Rep5 1035.52117320907 1035.5200699358602 73.314 2 -1.0927781847614924 0.34456909542884373 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 29122 15418 FTLRDLVLW True PC9_epitope_Rep5 1161.6546299067697 1161.65299490379 64.315 3 -1.0928514663523239 0.34462461843613557 1.0 ['DCDC1|p.V715Wfs*20|1|0.2|ENSG00000170959|chr11:30894319-30894319|C/-|frameshift_variant', 'DCDC1|p.M747Ifs*23|1|0.21|ENSG00000170959|chr11:30892971-30892972|-/A|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1'] 126742 24975 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 107.97 3 -1.0928612457108526 0.34462461843613557 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 124647 21198 VGWSLLCK True PC9_epitope_Rep6 904.4840594243599 904.4835149679301 94.386 1 -1.0928932894738483 0.3446370614599969 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant', 'ENST00000474202.1_1_12:40619397-40626186:+|nuORF'] 69124 14253 LTRKSWEL True PC9_epitope_Rep5 1031.5763795860698 1031.5752899358602 59.828 2 -1.0929324557807698 0.3446370614599969 1.0 ['ENST00000366595.7_1_1:236140589-236140733:-|nuORF'] 142888 17716 YYTRTLYQ True H1975_Epitope_Rep2 1106.53965972418 1106.53907496793 73.466 1 -1.0929465258093465 0.3446370614599969 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 105556 25191 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 108.87 2 -1.0929992353952291 0.3446583810934381 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 135502 11586 WIYSFWRYNGK True NCI_RA007_Epitope_Rep1 1518.7408191422198 1518.7397299358602 49.037 2 -1.0930879636559714 0.3446668212142287 1.0 ['ENST00000523815.5_1_8:74876767-74884117:-|nuORF'] 128722 9961 VPWSRWSCCK True PC9_epitope_Rep5 1250.5688687608201 1250.56776993586 43.29 2 -1.0931162554372984 0.3447267763081639 1.0 ['ENST00000422671.1_2_20:34095879-34099213:+|nuORF'] 19290 8737 ELKQDISSFRY True H1975_Epitope_Rep3 1384.69867954672 1384.6975899358602 38.61 2 -1.0931794503915728 0.34473521533072327 1.0 ['ENSG00000072315|ENST00000262839|TRPC5'] 19906 20876 ELTSNLFNIY True PC9_epitope_Rep5 1212.6026539035602 1212.60154993586 85.352 2 -1.0932164136533649 0.34474365413591934 1.0 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A', 'ENST00000540952.5_1_22:38982050-39003412:-|nuORF'] 44758 12257 ILYTPYGDIY True NCI_RA007_Epitope_Rep4 1216.6015912743999 1216.6004899358602 54.143 2 -1.0932836606804217 0.3447476529600392 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 736 11267 AAVLNTTLH True PC9_epitope_Rep4 938.51853035678 938.51742993586 51.115 2 -1.0933042543056049 0.3447476529600392 1.0 ['ENST00000437420.5_1_2:207078065-207082099:-|nuORF', 'ENST00000407325.6_1_2:207078065-207082592:-|nuORF', 'ENST00000451790.5_2_2:207078065-207078338:-|nuORF'] 23442 6840 EVTGDITQNYI True H1975_Epitope_Rep1 1251.59829679911 1251.5971899358601 31.355 2 -1.0934228787834934 0.3448289183933654 1.0 ['SLC17A6|p.E527V|1|0.2|ENSG00000091664|chr11:22377571-22377571|A/T|missense_variant'] 55553 6320 LAGRKVKDV True PC9_epitope_Rep3 984.6080140675198 984.60690993586 29.339 2 -1.093425680887604 0.3448289183933654 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant'] 68714 15711 LTKQCVLI True PC9_epitope_Rep6 916.5415743004799 916.54046993586 72.649 2 -1.0934562791610691 0.34483735544852806 1.0 ['ENST00000486882.5_1_1:79093429-79094083:+|nuORF'] 124082 22108 VGSLQHAR True PC9_epitope_Rep6 866.4722488706999 866.47170496793 97.98 1 -1.093521117220113 0.34484579228639495 1.0 ['ENSG00000124194|ENST00000342560|GDAP1L1', 'nc|ENSG00000124194|Q96MZ0-4|GDAP1L1'] 22402 12012 ETEKEKIKK True H1975_Epitope_Rep1 1131.6499384491497 1131.6488499358602 51.212 2 -1.093566678254022 0.34485422890697437 1.0 ['ENSG00000179051|ENST00000375436|RCC2'] 127747 20833 VPAVLFTTL True PC9_epitope_Rep4 959.5691689473101 959.56806993586 88.286 2 -1.0936071314030975 0.34486266531027465 1.0 ['nc|ENSG00000159140|P18583-4|SON'] 126855 11699 VLQAREERPLL True PC9_epitope_Rep5 1322.7670338900598 1322.7659299358602 49.996 2 -1.0937002339001496 0.3448737591574502 1.0 ['ENST00000269300.8_1_17:8784037-8784088:-|nuORF'] 134205 5176 VYLSPFMCP True PC9_epitope_Rep1 1055.48201081903 1055.4809099358602 24.762 2 -1.0937079168656483 0.3448737591574502 1.0 ['ENST00000600118.5_1_19:59065674-59065809:-|nuORF'] 68313 8416 LTEKVSLYR True H1975_Epitope_Rep1 1107.62880908175 1107.6277099358601 37.299 2 -1.093770392556719 0.3448737591574502 1.0 ['ENST00000494602.5_1_20:13976409-14547255:+|nuORF', 'ENST00000490428.5_1_20:13976436-14665616:+|nuORF', 'ENST00000477147.5_1_20:13976316-14474162:+|nuORF', 'nc|ENSG00000172264|A1Z1Q3|MACROD2', 'ENSG00000172264|ENST00000684519|MACROD2'] 18230 13764 EINSDDEQES True PC9_epitope_Rep5 1164.44185572736 1164.4407499358601 57.965 2 -1.0938024713476087 0.3448737591574502 1.0 ['ENSG00000109805|ENST00000251496|NCAPG'] 136658 10695 WWRWLTFWRR True H1975_Epitope_Rep1 1591.8313059124698 1591.83020993586 46.098 2 -1.0938029570678254 0.3448737591574502 1.0 ['nc|ENSG00000164284|Q8TAA5-2|GRPEL2'] 61207 10322 LILKRCGSLC True H1975_Epitope_Rep1 1104.61475632408 1104.6136499358602 44.651 2 -1.0940273480870275 0.3448737591574502 1.0 ['ENST00000579695.5_1_17:38077365-38077797:-|nuORF'] 79370 9979 PASHYYKYKQQ True NCI_RA007_Epitope_Rep2 1411.68844921619 1411.68734993586 43.445 2 -1.0940538503914823 0.3448737591574502 1.0 ['ENSG00000171435|ENST00000339824|KSR2', 'nc|ENSG00000171435|Q6VAB6-2|KSR2', 'ENST00000545002.1_1_12:117955650-118115004:-|nuORF'] 100565 16586 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 71.774 2 -1.0940916540663075 0.3448737591574502 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 46128 17297 ISKDTEAHI True PC9_epitope_Rep2 1012.5189242796 1012.51782993586 71.791 2 -1.094094490091037 0.3448737591574502 1.0 ['ENSG00000138658|ENST00000505019|ZGRF1', 'ZGRF1|p.A1401Lfs*7|1|0.1|ENSG00000138658|chr4:112584076-112584076|T/-|frameshift_variant', 'nc|ENSG00000138658|Q86YA3-3|ZGRF1', 'nc|ENSG00000138658|Q86YA3-6|ZGRF1', 'ENST00000514770.5_1_4:113532004-113549797:-|nuORF', 'nc|ENSG00000138658|Q86YA3-5|ZGRF1', 'ENST00000264370.9_1_4:113529030-113554332:-|nuORF', 'nc|ENSG00000138658|Q86YA3-4|ZGRF1'] 40977 6530 HTDQLTGVLGS True NCI_RA007_Epitope_Rep2 1126.56185172074 1126.56074993586 30.012 2 -1.0941017191382048 0.3448737591574502 1.0 ['ENST00000471308.5_1_3:51992122-51994256:-|nuORF'] 19342 18951 ELLFLFLWKWK True NCI_RA007_Epitope_Rep2 1521.87479343389 1521.87368993586 78.562 2 -1.0941043151253997 0.3448737591574502 1.0 ['ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 57378 10316 LEALTKHFQD True PC9_epitope_Rep3 1200.6138872935999 1200.61278993586 44.626 2 -1.0941117162263732 0.3448737591574502 1.0 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 122022 18701 VFVMTILII True NCI_RA007_Epitope_Rep5 1047.6402257125899 1047.6391299358602 78.753 2 -1.0942687126675388 0.344946568816789 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 56018 10278 LASLYVMMTVT True PC9_epitope_Rep4 1227.62431794827 1227.62322993586 47.221 2 -1.0943046591714485 0.3449545536472951 1.0 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5'] 68689 6217 LTKGQVGG True PC9_epitope_Rep2 758.4286527232199 758.42754993586 29.311 2 -1.0943283157854962 0.3449545536472951 1.0 ['ENSG00000014138|ENST00000265465|POLA2'] 36492 8729 GVGLNTTI True NCI_RA007_Epitope_Rep3 773.4283183700501 773.4272299358599 41.426 2 -1.0943437450296176 0.3449545536472951 1.0 ['ENSG00000147168|ENST00000374202|IL2RG', 'IL2RG|p.T29M|1|0.09|ENSG00000147168|chrX:71111454-71111454|G/A|missense_variant', 'ENST00000473378.1_1_X:70331248-70331389:-|nuORF', 'ENST00000276110.6_1_X:70331245-70331389:-|nuORF', 'ENST00000512747.3_1_X:70329223-70331389:-|nuORF'] 128812 17089 VQAPLAKP True NCI_RA007_Epitope_Rep3 822.49633836022 822.49524993586 75.087 2 -1.0944037926164794 0.3449545536472951 1.0 ['ENST00000498926.6_1_12:133297723-133297774:+|nuORF'] 36455 6876 GVGEHADVPGP True H1975_Epitope_Rep3 1033.4828731240498 1033.48176993586 31.407 2 -1.0945299325732298 0.344984293732942 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 110151 9719 TENVGDSGLRF True PC9_epitope_Rep1 1193.56766537717 1193.5665699358601 42.242 2 -1.0945428881364156 0.344984293732942 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B', 'ENST00000504041.1_1_5:169407-179718:+|nuORF'] 23413 11663 EVSRRSLRS True PC9_epitope_Rep1 1088.6050539454 1088.60394993586 49.739 2 -1.0945966978537969 0.3449927262896353 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1'] 119844 20251 VDEGKIREF True PC9_epitope_Rep1 1091.56112344475 1091.56002993586 82.724 2 -1.0946599018600272 0.34502690594505525 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENST00000554384.1_1_14:21876861-21881122:-|nuORF'] 80343 16054 PGGHGRCS True NCI_RA007_Epitope_Rep5 769.32895576529 769.32784993586 68.482 2 -1.094717244357535 0.3450482112282599 1.0 ['ENST00000358187.2_1_10:106075300-106075366:-|nuORF'] 75966 6490 NLTQILEPS True NCI_RA007_Epitope_Rep1 1013.5393253710099 1013.53822993586 29.264 2 -1.0948207315422027 0.34509526261585993 1.0 ['nc|ENSG00000181827|Q2KHR2-1|RFX7', 'nc|ENSG00000181827|Q2KHR2-2|RFX7', 'ENSG00000181827|ENST00000559447|RFX7'] 67889 14272 LTAVEKWNEKK True H1975_Epitope_Rep1 1344.7401504358797 1344.73904993586 60.081 2 -1.0948658825004756 0.34512943963131265 1.0 ['ENSG00000164114|ENST00000311277|MAP9'] 60152 11090 LGNLRPPV True PC9_epitope_Rep1 864.51813643396 864.51702993586 47.545 2 -1.09496705207963 0.34517648876187534 1.0 ['ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 122039 7052 VFVVLLLC True H1975_Epitope_Rep3 904.5455970517598 904.54448993586 32.09 2 -1.0950438596939525 0.345180474743834 1.0 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31', 'BCAP31|p.E178Rfs*7|1|0.23|ENSG00000185825|chrX:153703004-153703004|C/-|frameshift_variant'] 140534 25222 YRPAWAAG True PC9_epitope_Rep6 890.4398861132598 890.43878993586 112.27 2 -1.0950439869593571 0.345180474743834 1.0 ['LILRB5|p.G499W|1|0.5|ENSG00000105609|chr19:54252529-54252529|C/A|missense_variant'] 88511 19949 QSVMLALRRGD True NCI_RA007_Epitope_Rep2 1244.6659399497996 1244.66484993586 82.598 2 -1.0950836952088383 0.3451889039068031 1.0 ['ENSG00000172247|ENST00000302514|C1QTNF4'] 58568 8045 LEQNIQLP True NCI_RA007_Epitope_Rep1 953.51819600361 953.51708993586 35.291 2 -1.0951089910609888 0.34520131809288435 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 113761 23665 TMKNYYRIL True NCI_RA007_Epitope_Rep3 1200.6325145632 1200.6308549037901 102.62 3 -1.0951361261862467 0.34520131809288435 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 61726 8903 LLAEEENGN True H1975_Epitope_Rep3 987.45090428943 987.44980993586 39.244 2 -1.0951641784369581 0.34520131809288435 1.0 ['ENST00000496961.5_1_1:110038754-110038895:+|nuORF'] 131818 18066 VTQLIPRGTDP True PC9_epitope_Rep1 1195.65608645875 1195.6549899358602 74.283 2 -1.0952016826266444 0.3452097465535661 1.0 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 74667 23576 NGNGHEHC True PC9_epitope_Rep4 866.3089485967 866.30784993586 98.991 2 -1.0952430142989553 0.3452266028240079 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 131905 9501 VTRPSEFNY True NCI_RA007_Epitope_Rep2 1111.52982331647 1111.5287299358602 41.57 2 -1.095249875691431 0.3452266028240079 1.0 ['ENSG00000166825|ENST00000300060|ANPEP'] 19210 13473 ELILEYTLCYK True H1975_Epitope_Rep1 1386.7104901003802 1386.7093899358601 56.94 2 -1.0952569756496986 0.3452350306337847 1.0 ['ENST00000462785.1_1_2:112526870-112536431:-|nuORF'] 91177 2381 RGAGSKRKRR True PC9_epitope_Rep5 1170.71700443622 1170.71536490379 13.191 3 -1.0952749015395504 0.3452390145957217 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 89370 15777 QWTSRKRK True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 69.694 2 -1.0952987450960803 0.3452390145957217 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 69025 8873 LTQEEKAA True NCI_RA007_Epitope_Rep3 888.4552613938798 888.45416993586 41.993 2 -1.095332795864446 0.34524744192032947 1.0 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 44017 20184 IIHSGHFMV True PC9_epitope_Rep4 1039.52732121867 1039.52622993586 85.775 2 -1.0953889710575881 0.3452816103789127 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP'] 58391 5909 LENNPEMK True H1975_Epitope_Rep3 973.45388149489 973.45278993586 27.739 2 -1.0954505744024259 0.34528957528957527 1.0 ['nc|ENSG00000196460|Q6ZV50|RFX8', 'ENSG00000196460|ENST00000428343|RFX8'] 53430 9858 KRCQGRMRK True PC9_epitope_Rep1 1161.6335347060497 1161.63187490379 42.778 3 -1.095452696157767 0.34528957528957527 1.0 ['nc|ENSG00000167632|Q96Q05-3|TRAPPC9', 'ENSG00000167632|ENST00000438773|TRAPPC9', 'nc|ENSG00000167632|Q96Q05-2|TRAPPC9', 'TRAPPC9-KCNK9|1|fusion', 'TRAPPC9-KCNK9|2|fusion', 'TRAPPC9|p.Y333Ifs*10|1|0.08|ENSG00000167632|chr8:140405589-140405589|G/-|frameshift_variant'] 97712 18941 SEIEILAVDLP True PC9_epitope_Rep1 1197.6492697428098 1197.64816993586 77.64 2 -1.0955144804383938 0.34528957528957527 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 135925 24530 WPTLAALAL True NCI_RA007_Epitope_Rep2 954.5538532363399 954.55274993586 103.04 2 -1.0955460056919242 0.34528957528957527 1.0 ['nc|ENSG00000117407|Q5T4W7-2|ARTN', 'ENSG00000117407|ENST00000372359|ARTN', 'nc|ENSG00000117407|Q5T4W7-3|ARTN'] 63479 21630 LLWPLPFP True PC9_epitope_Rep5 981.5687750244899 981.56766993586 88.242 2 -1.0956213195864848 0.3452926339630411 1.0 ['ENST00000334370.8_1_19:42840288-42840357:+|nuORF'] 127706 10271 VPALTLAP True PC9_epitope_Rep1 780.47454028648 780.47344993586 44.392 2 -1.0956376470741476 0.3452926339630411 1.0 ['nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 77391 10416 NSFMHSMV True H1975_Epitope_Rep2 951.3942584437899 951.39316993586 45.079 2 -1.0956598597704255 0.3452926339630411 1.0 ['nc|ENSG00000260357|Q6PK57|DNM1P34'] 133841 19101 VYGIPDPQF True PC9_epitope_Rep6 1034.5072969667397 1034.5061899358602 86.122 2 -1.0956749018113479 0.3452926339630411 1.0 ['nc|ENSG00000198948|O75121-3|MFAP3L', 'ENSG00000198948|ENST00000361618|MFAP3L'] 38178 3213 HDPHVRHTWK True NCI_RA007_Epitope_Rep1 1311.65848650059 1311.65738993586 16.39 2 -1.0957336992086626 0.3452926339630411 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4'] 71349 21231 LYRADPKEL True PC9_epitope_Rep3 1103.59750895347 1103.59640993586 86.956 2 -1.095754226347752 0.3452926339630411 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 18887 16710 ELDVATLQENI True PC9_epitope_Rep5 1243.62959692739 1243.6284899358602 69.281 2 -1.0957550414068602 0.3452926339630411 1.0 ['ENSG00000158163|ENST00000327532|DZIP1L', 'nc|ENSG00000158163|Q8IYY4-2|DZIP1L'] 140039 18790 YQFGEIRTI True PC9_epitope_Rep5 1125.5818588893299 1125.5807699358602 77.289 2 -1.0957589159767802 0.3452926339630411 1.0 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 135905 6038 WPREDILR True NCI_RA007_Epitope_Rep4 1083.5825275956697 1083.5814299358601 29.842 2 -1.0957733707681148 0.3453010590793859 1.0 ['TMEM259|p.G109D|1|0.23|ENSG00000182087|chr19:1014373-1014373|C/T|missense_variant'] 20162 9297 ENELLHPP True H1975_Epitope_Rep3 947.4712458111899 947.47014993586 40.755 2 -1.0958785508731848 0.3453352206923176 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'nc|ENSG00000115155|Q9HC10-2|OTOF', 'ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.N1652Tfs*30|1|0.17|ENSG00000214814|chr8:124101166-124101166|C/-|frameshift_variant', 'FER1L6|p.R1073Gfs*13|1|0.1|ENSG00000214814|chr8:124061918-124061918|G/-|frameshift_variant'] 10385 3442 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 18.165 2 -1.095921616047433 0.34535206917850525 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 10392 3214 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 17.403 2 -1.0959314633616433 0.34535206917850525 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 66177 6710 LSEQVLETFHD True NCI_RA007_Epitope_Rep1 1316.62484590012 1316.6237499358601 30.11 2 -1.0959366413101 0.3453560491031217 1.0 ['COL6A3|p.L1816F|1|0.04|ENSG00000163359|chr2:237366739-237366739|C/A|missense_variant'] 50066 12987 KKGAGGGG True NCI_RA007_Epitope_Rep4 630.34492309926 630.3443749679301 57.054 1 -1.0959535590629943 0.3453560491031217 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 122734 11791 VGGKSGLF True PC9_epitope_Rep4 763.42283906679 763.42174993586 53.123 2 -1.0959923832459444 0.3453644727530078 1.0 ['nc|ENSG00000179454|Q9NXS3-2|KLHL28', 'ENSG00000179454|ENST00000396128|KLHL28'] 16187 20539 EEEDSLSPLQI True PC9_epitope_Rep1 1258.5928770654998 1258.59124490379 83.818 3 -1.0960501985469178 0.34542389891789654 1.0 ['MAGEC1|p.G685E|1|0.55|ENSG00000155495|chrX:141907458-141907458|G/A|missense_variant'] 25026 14976 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 62.317 2 -1.0960797923786252 0.34542389891789654 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46250 11741 ISNVSGKDI True PC9_epitope_Rep2 931.49746055903 931.49636993586 50.495 2 -1.0960811632190324 0.34542389891789654 1.0 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.S811Tfs*2|1|0.35|ENSG00000064313|chr8:119762511-119762541|TTATCCAAAGTTCTAACTTCATTATTCACAC/-|frameshift_variant'] 119510 4394 VASEGLPEPV True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 22.022 2 -1.0961580734251393 0.34542389891789654 1.0 ['ENSG00000105364|ENST00000253099|MRPL4', 'nc|ENSG00000105364|Q9BYD3-2|MRPL4', 'ENST00000588963.1_1_19:10363075-10363378:+|nuORF'] 17056 4762 EGGPLEGAAW True NCI_RA007_Epitope_Rep5 985.4505103666099 985.44940993586 25.0 2 -1.096193667287006 0.34543629860271224 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 114427 10073 TPTTPPAVAP True H1975_Epitope_Rep2 950.5072969667399 950.5067449679301 43.738 1 -1.0962120306174177 0.34543629860271224 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 100065 7781 SIRRELLRMFH True PC9_epitope_Rep4 1456.8085218625597 1456.80688490379 37.328 3 -1.0962417590324967 0.34543629860271224 1.0 ['ENSG00000185085|ENST00000330574|INTS5', 'INTS5|p.E601Nfs*21|1|0.24|ENSG00000185085|chr11:62648279-62648279|C/-|frameshift_variant'] 33884 8715 GLPRVRGSAGP True H1975_Epitope_Rep3 1065.60432566941 1065.60322993586 38.523 2 -1.0963354991191008 0.34544472035304863 1.0 ['ENST00000371317.9_1_X:119737922-119739264:+|nuORF'] 124142 22457 VGSRRGRR True PC9_epitope_Rep3 942.5583785364998 942.55783496793 91.658 1 -1.0964126252094641 0.34548729495014474 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 84642 8016 QDGESLQMFQA True H1975_Epitope_Rep1 1252.5394020239999 1252.53830993586 35.777 2 -1.0964132713630927 0.34548729495014474 1.0 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000475971.5_1_7:893033-912965:+|nuORF', 'ENST00000413171.6_1_7:892397-912965:+|nuORF', 'nc|ENSG00000164828|O94901-6|SUN1'] 117612 17264 TVTEFKQL True H1975_Epitope_Rep2 964.5229470308798 964.52184993586 71.697 2 -1.0964336761286984 0.3454912707296049 1.0 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47'] 136225 17855 WRSTTGWWTS True NCI_RA007_Epitope_Rep5 1266.5781704912197 1266.57652490379 75.477 3 -1.0964699066740604 0.3454912707296049 1.0 ['ENST00000556434.5_1_14:50394420-50412914:-|nuORF'] 60782 25404 LHSKLISGG True PC9_epitope_Rep3 910.52361573722 910.52250993586 103.15 2 -1.0964830849710097 0.34549969123095925 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 60776 23811 LHSKLISGG True NCI_RA007_Epitope_Rep3 910.52361573722 910.52250993586 103.19 2 -1.0964855224279786 0.34550811151565053 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 60777 23782 LHSKLISGG True NCI_RA007_Epitope_Rep4 910.52361573722 910.52250993586 103.1 2 -1.0965072259044837 0.34552939662935805 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 63636 26744 LMMVKKRWK True PC9_epitope_Rep5 1218.7093254152599 1218.7082299358601 109.12 2 -1.0965399483323937 0.3455399061032864 1.0 ['ENST00000560307.5_1_15:101821921-101825192:-|nuORF'] 77419 9055 NSLEKVVHFYD True H1975_Epitope_Rep1 1349.66156576201 1349.6604699358602 39.739 2 -1.0965487077317184 0.3455399061032864 1.0 ['ENSG00000174206|ENST00000398055|KICS2'] 60787 23384 LHSKLISGG True PC9_epitope_Rep6 910.52361573722 910.52250993586 103.05 2 -1.0965509981106811 0.3455399061032864 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 60774 25129 LHSKLISGG True NCI_RA007_Epitope_Rep1 910.52361573722 910.52250993586 103.99 2 -1.0965640048266974 0.3455399061032864 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 23184 5306 EVLKSRKYI True NCI_RA007_Epitope_Rep1 1134.67609362734 1134.6744449037901 24.72 3 -1.0965697067114866 0.3455399061032864 1.0 ['ENST00000256707.7_2_2:8870236-8870326:-|nuORF'] 124201 15232 VGTASSFP True PC9_epitope_Rep3 764.37046914076 764.36936993586 63.739 2 -1.0966407115477983 0.3455399061032864 1.0 ['ADGRG4|p.V2200*|1|0.54|ENSG00000156920|chrX:136350301-136350301|G/-|frameshift_variant', 'nc|ENSG00000156920|Q8IZF6-2|ADGRG4', 'nc|ENSG00000156920|Q8IZF6-3|ADGRG4', 'ENSG00000156920|ENST00000394143|ADGRG4', 'ADGRG4|p.V1528Sfs*3|1|0.13|ENSG00000156920|chrX:136348281-136348282|-/A|frameshift_variant', 'ADGRG4|p.N1622Kfs*62|1|0.8|ENSG00000156920|chrX:136348564-136348565|-/C|frameshift_variant'] 33085 16006 GIPANRIVL True PC9_epitope_Rep3 951.5865503469499 951.58544993586 66.713 2 -1.0966619606759689 0.3455399061032864 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 60783 25634 LHSKLISGG True PC9_epitope_Rep5 910.52361573722 910.52250993586 103.94 2 -1.0966839124228862 0.3455399061032864 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 60775 24698 LHSKLISGG True NCI_RA007_Epitope_Rep2 910.52361573722 910.52250993586 103.82 2 -1.0966982957244142 0.3455399061032864 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 120200 10124 VEAQDEITDM True H1975_Epitope_Rep3 1149.48596946881 1149.4848699358602 43.985 2 -1.0967362735894337 0.3455399061032864 1.0 ['ENSG00000120051|ENST00000369704|CFAP58', 'CFAP58|p.V618Ffs*7|1|0.12|ENSG00000120051|chr10:104400713-104400713|C/-|frameshift_variant'] 45926 5404 ISEGHAPLP True NCI_RA007_Epitope_Rep2 919.4763311916299 919.4752299358599 25.64 2 -1.096749578559843 0.3455399061032864 1.0 ['ENST00000541541.5_1_12:31862005-31881942:-|nuORF'] 10404 3605 CGMWLGVI True PC9_epitope_Rep6 877.4190166396498 877.41790993586 20.125 2 -1.096833806198712 0.3455399061032864 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 41681 10537 IAGRRGKAKS True PC9_epitope_Rep5 1042.6359601508598 1042.63486993586 45.519 2 -1.0968550374498953 0.3455399061032864 1.0 ['ENST00000349736.9_1_20:463717-463870:-|nuORF'] 138138 11669 YGIWPPPAAP True PC9_epitope_Rep1 1067.5440168286298 1067.54290993586 49.762 2 -1.096871075721635 0.3455399061032864 1.0 ['ENST00000585431.2_1_19:16022160-16022415:-|nuORF'] 12396 6930 DITDRPDP True H1975_Epitope_Rep2 927.42977492203 927.42866993586 31.577 2 -1.0968864370306817 0.3455399061032864 1.0 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.L682F|1|0.06|ENSG00000253953|chr5:141389928-141389928|C/T|missense_variant'] 11109 8060 DDAWPSRVDAA True PC9_epitope_Rep5 1201.5363652488902 1201.53526993586 35.94 2 -1.096975620663427 0.34556960397185743 1.0 ['ENSG00000142700|ENST00000404795|DMRTA2'] 53547 21782 KRPARLTRREA True H1975_Epitope_Rep2 1352.8112987438801 1352.8096649037902 90.093 3 -1.0970047357984716 0.34556960397185743 1.0 ['nc|ENSG00000101278|Q9NQ39|RPS10P5'] 131580 12551 VTLGRRVF True H1975_Epitope_Rep1 946.5712346359799 946.57012993586 53.323 2 -1.097028081261693 0.34559485530546624 1.0 ['ENST00000377044.8_2_9:74383426-74383705:-|nuORF'] 14807 21547 DVQQPLSQIP True PC9_epitope_Rep2 1123.5873381925899 1123.58624993586 88.348 2 -1.0970304940386986 0.34559485530546624 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 3848 7357 AGVSAVVAVQ True PC9_epitope_Rep5 899.5076313199099 899.50652993586 33.257 2 -1.0970402098301912 0.34559485530546624 1.0 ['ENST00000602004.1_1_19:39616447-39616489:+|nuORF'] 23304 10107 EVQKDIKNV True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 44.214 2 -1.0970978439300392 0.34564138179386267 1.0 ['ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF'] 36895 10463 GVLPGGHL True PC9_epitope_Rep3 748.42317341996 748.42206993586 45.185 2 -1.0971088787224625 0.34564138179386267 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 19515 23728 ELPKRRRQRG True PC9_epitope_Rep1 1294.7694339318998 1294.76832993586 96.065 2 -1.0971209359449667 0.34564138179386267 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 41808 8807 IATELNRLQ True H1975_Epitope_Rep3 1056.5927579262 1056.5916699358602 38.883 2 -1.0971381267461338 0.34564138179386267 1.0 ['ENSG00000137992|ENST00000370132|DBT'] 56454 21064 LDELHWVP True PC9_epitope_Rep5 1007.5076313199099 1007.50652993586 86.083 2 -1.0971663434751153 0.34564979744067903 1.0 ['MOGS|p.A646V|1|0.37|ENSG00000115275|chr2:74461852-74461852|G/A|missense_variant'] 100728 10227 SLDTPSNLIPI True H1975_Epitope_Rep3 1168.63395403184 1168.6328499358601 44.386 2 -1.0973044585767864 0.3456839343587633 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 79791 17990 PEEKVAVPVP True PC9_epitope_Rep1 1063.5913609438699 1063.59026993586 73.991 2 -1.0973825371631643 0.3456923492418689 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 80146 10856 PFRIWHSP True PC9_epitope_Rep3 1038.5399345076999 1038.5388299358601 46.734 2 -1.0974058097047197 0.34570076390853677 1.0 ['ENST00000475374.5_1_X:78207700-78207754:+|nuORF'] 25279 22354 FDPALLEFLV True PC9_epitope_Rep4 1162.62741209942 1162.62577490379 94.221 3 -1.0974340110852419 0.34572552852219535 1.0 ['ENSG00000145337|ENST00000273968|PYURF'] 92959 24617 RPIAPKWKVM True PC9_epitope_Rep4 1224.71651897068 1224.7154299358601 103.18 2 -1.0974425498973952 0.34572552852219535 1.0 ['ENSG00000182463|ENST00000371497|TSHZ2', 'nc|ENSG00000182463|Q9NRE2-2|TSHZ2'] 10403 3530 CGMWLGVI True PC9_epitope_Rep6 877.4190166396498 877.41790993586 19.788 2 -1.0974775386636022 0.34572552852219535 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 43097 8513 IEWLDGFPL True NCI_RA007_Epitope_Rep1 1088.5542471591598 1088.5531499358601 37.115 2 -1.097493019326305 0.34572552852219535 1.0 ['ENST00000332624.7_1_2:202285280-202285352:-|nuORF'] 124568 19264 VGVRRRGNVRT True PC9_epitope_Rep6 1268.7537838677597 1268.7526899358602 86.749 2 -1.0975008369726516 0.34572552852219535 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 137034 18276 YALQRLRR True NCI_RA007_Epitope_Rep3 1074.6410455312998 1074.6399499358602 80.037 2 -1.097512873295459 0.34572552852219535 1.0 ['ENST00000196371.9_1_5:41731180-41731306:-|nuORF'] 11653 17400 DGNSGFNEHL True PC9_epitope_Rep3 1088.45230127176 1088.45120993586 72.098 2 -1.0976007777590817 0.3457552143610318 1.0 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1', 'TP53BP1|p.I1039Rfs*3|1|0.48|ENSG00000067369|chr15:43438368-43438384|TTGCCTGGCTTCACAGA/-|frameshift_variant'] 76097 716 NMQKARELWD True NCI_RA007_Epitope_Rep1 1289.61865540421 1289.61700490379 3.7846 3 -1.0976036109671194 0.3457552143610318 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 15170 7000 EAAQRGESLQL True H1975_Epitope_Rep1 1200.6098645423199 1200.6087699358602 31.962 2 -1.0976644933662443 0.3457760061720458 1.0 ['ENST00000479033.1_1_10:5691052-5708523:-|nuORF', 'nc|ENSG00000196372|Q8WXK3-2|ASB13', 'ENSG00000196372|ENST00000357700|ASB13'] 99892 11628 SILTIDDGIFE True PC9_epitope_Rep2 1221.6128842340897 1221.61123490379 50.053 3 -1.0976853857907292 0.3457760061720458 1.0 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 8580 22770 ATVPNYWD True NCI_RA007_Epitope_Rep5 964.42904664604 964.4279499358599 94.791 2 -1.0976981824700427 0.3457760061720458 1.0 ['ENSG00000113838|ENST00000338733|TBCCD1', 'nc|ENSG00000113838|Q9NVR7-2|TBCCD1'] 61004 14685 LIEMLMRFL True PC9_epitope_Rep1 1164.6399084427599 1164.63826490379 61.307 3 -1.0977021932543103 0.3457760061720458 1.0 ['ENST00000536411.1_1_12:6483977-6484974:-|nuORF'] 3053 11846 AFSQIAYLDQH True PC9_epitope_Rep5 1291.61970095003 1291.6180649037901 50.564 3 -1.097727955427784 0.3457844183564568 1.0 ['ENSG00000198440|ENST00000333201|ZNF583'] 125620 4390 VKKPIIGILM True PC9_epitope_Rep3 1110.71987301562 1110.71876993586 21.99 2 -1.0977710319649825 0.345801242076299 1.0 ['GGH|p.A31V|1|0.38|ENSG00000137563|chr8:63038677-63038677|G/A|missense_variant'] 61383 10614 LITETVRVP True H1975_Epitope_Rep3 1026.6073453611798 1026.6062499358602 45.896 2 -1.0977882232777254 0.345801242076299 1.0 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 60779 26057 LHSKLISGG True PC9_epitope_Rep1 910.52361573722 910.52250993586 105.46 2 -1.0978613001077449 0.34580965361174687 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 30586 16667 GAIKSSFAP True PC9_epitope_Rep6 876.4705175351999 876.46942993586 76.579 2 -1.0978999392751108 0.34581313722212936 1.0 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 113752 8566 TMEKFLDPSR True H1975_Epitope_Rep2 1222.6016083577397 1222.6005099358601 37.902 2 -1.0979564748342723 0.34581313722212936 1.0 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant', 'ZFHX3|p.S2241Kfs*30|1|0.48|ENSG00000140836|chr16:72795962-72795963|-/C|frameshift_variant', 'nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant'] 67045 17754 LSPVDWDKP True PC9_epitope_Rep1 1055.5287606873098 1055.52766993586 73.087 2 -1.0980102033091248 0.34581313722212936 1.0 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'ENST00000470950.1_1_1:25891246-25893480:+|nuORF', 'ENST00000474283.1_1_1:25890132-25893480:+|nuORF', 'ENST00000484476.5_1_1:25889538-25893480:+|nuORF'] 900 8166 ADLPDLQDP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 36.361 2 -1.0981154374105446 0.34581313722212936 1.0 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'ENST00000570306.5_1_17:19284999-19286541:+|nuORF', 'ENST00000571657.5_1_17:19281216-19286541:+|nuORF'] 101379 5706 SLKEASSEHL True NCI_RA007_Epitope_Rep3 1099.55095268387 1099.54984993586 29.42 2 -1.0981186256054523 0.34581313722212936 1.0 ['ENST00000405409.6_2_22:36137158-36137320:-|nuORF'] 37635 12030 GVWGSSWPGTW True PC9_epitope_Rep1 1218.5458077337798 1218.54415490379 51.134 3 -1.0981582526727558 0.3458215479557727 1.0 ['PDE3A|p.L247Wfs*29|1|0.21|ENSG00000172572|chr12:20370022-20370022|G/-|frameshift_variant'] 60690 15521 LHNPTLMTP True PC9_epitope_Rep1 1022.5219014850601 1022.52080993586 64.524 2 -1.0981836338653224 0.3458428150833751 1.0 ['OR6N1|p.Y132N|1|0.15|ENSG00000197403|chr1:158766289-158766289|A/T|missense_variant'] 112060 8829 TITGFFAPQP True PC9_epitope_Rep1 1077.5494961318898 1077.54838993586 38.802 2 -1.0982222242016992 0.34586408166413823 1.0 ['nc|ENSG00000196408|Q8NFA2-4|NOXO1', 'ENSG00000196408|ENST00000356120|NOXO1', 'nc|ENSG00000196408|Q8NFA2-2|NOXO1', 'nc|ENSG00000196408|Q8NFA2|NOXO1'] 91176 1281 RGAGSKRKRR True PC9_epitope_Rep5 1170.71700443622 1170.71536490379 7.1095 3 -1.0982446389200584 0.3458932726548138 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 63767 5981 LNENHPRLNQS True H1975_Epitope_Rep1 1320.6534606897999 1320.6523699358602 28.077 2 -1.098259470025787 0.3458932726548138 1.0 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 55998 7383 LASKDREIL True PC9_epitope_Rep4 1043.59750895347 1043.59640993586 35.739 2 -1.0983022421454371 0.3458932726548138 1.0 ['CUX2|p.G541Afs*22|1|0.24|ENSG00000111249|chr12:111310400-111310400|G/-|frameshift_variant', 'ENSG00000111249|ENST00000261726|CUX2'] 68794 11607 LTLLWLWYVYR True H1975_Epitope_Rep3 1524.8493069620401 1524.84820993586 49.778 2 -1.0983135680920444 0.3458932726548138 1.0 ['SLC17A9|p.V198L|1|0.31|ENSG00000101194|chr20:62962718-62962718|G/T|missense_variant'] 112736 9456 TLGYQLILQR True H1975_Epitope_Rep1 1203.6975573479099 1203.69646993586 41.289 2 -1.0983146493711275 0.3458932726548138 1.0 8985 10720 AVGLGVRFIK True NCI_RA007_Epitope_Rep1 1058.66004964038 1058.6589499358602 45.691 2 -1.0983385011774978 0.34591453694657276 1.0 ['ENSG00000188316|ENST00000341276|ENO4', 'nc|ENSG00000188316|A6NNW6-2|ENO4', 'nc|ENSG00000188316|A6NNW6-4|ENO4'] 66532 7376 LSHRYQSR True PC9_epitope_Rep2 1045.54172541285 1045.5406299358601 33.753 2 -1.09836266259319 0.34592294540359175 1.0 ['ZDBF2|p.R2235S|1|0.14|ENSG00000204186|chr2:206311231-206311231|C/A|missense_variant'] 122531 14012 VGERWHPY True PC9_epitope_Rep6 1042.49846361854 1042.4973699358602 65.751 2 -1.0983835363314767 0.34595706388996017 1.0 ['CHRDL1|p.P305Lfs*4|1|0.11|ENSG00000101938|chrX:110688649-110688649|A/-|frameshift_variant', 'nc|ENSG00000101938|Q9BU40-3|CHRDL1', 'nc|ENSG00000101938|Q9BU40|CHRDL1', 'nc|ENSG00000101938|Q9BU40-5|CHRDL1', 'ENSG00000101938|ENST00000372042|CHRDL1'] 126991 20076 VLRSWWPRWWW True H1975_Epitope_Rep1 1656.8466216234397 1656.8455299358602 83.539 2 -1.0983928554456794 0.3459654715841164 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 75041 9441 NHSIMQLCNSK True H1975_Epitope_Rep3 1273.59072640421 1273.58962993586 41.316 2 -1.0984709257811773 0.3459951409509853 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3', 'ADGRB3|p.R185Efs*28|1|0.19|ENSG00000135298|chr6:68639225-68639225|G/-|frameshift_variant', 'ADGRB3|p.E233Gfs*31|1|0.18|ENSG00000135298|chr6:68639369-68639370|-/A|frameshift_variant', 'ADGRB3|p.L919Rfs*42|1|0.09|ENSG00000135298|chr6:69239168-69239168|T/-|frameshift_variant'] 68146 7184 LTDQMTFGER True NCI_RA007_Epitope_Rep5 1196.54957278488 1196.54846993586 34.312 2 -1.098473135361568 0.3459951409509853 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'nc|ENSG00000271271|P0DTE5-2|UGT2A2', 'ENSG00000271271|ENST00000604629|UGT2A2'] 129294 12296 VQVQNIQSL True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 52.606 2 -1.0985512035397254 0.3460119544957902 1.0 ['ENSG00000105866|ENST00000222584|SP4'] 126600 15056 VLMAMGVP True H1975_Epitope_Rep2 816.4237676669198 816.42266993586 63.064 2 -1.0985545927778941 0.3460119544957902 1.0 ['ENSG00000282936|ENST00000634965|unknown'] 13461 5793 DNEKMKIPFTN True H1975_Epitope_Rep3 1335.6492868261498 1335.64818993586 27.306 2 -1.0986121098022037 0.34604162114220344 1.0 ['LAMA4|p.D1172N|1|0.24|ENSG00000112769|chr6:112134510-112134510|C/T|missense_variant'] 12428 11996 DIVHAVGERVH True PC9_epitope_Rep1 1230.64691875738 1230.64528490379 51.005 3 -1.0986887576040605 0.34604162114220344 1.0 ['ENSG00000197077|ENST00000358431|KIAA1671'] 15260 2744 EAEQLSHQAAP True H1975_Epitope_Rep3 1179.5520153130299 1179.55090993586 14.639 2 -1.098749267721491 0.3460534940812051 1.0 ['ENSG00000160957|ENST00000617875|RECQL4'] 60184 4960 LGPFTFFDVQK True H1975_Epitope_Rep3 1297.6706738937298 1297.6695699358602 24.206 2 -1.098750959959696 0.3460534940812051 1.0 ['ENSG00000109066|ENST00000335464|TMEM104', 'nc|ENSG00000109066|Q8NE00-2|TMEM104'] 10401 3375 CGMWLGVI True PC9_epitope_Rep6 877.4190166396498 877.41790993586 19.109 2 -1.098774554520161 0.3460534940812051 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 31020 10106 GASQRKLSSN True H1975_Epitope_Rep3 1046.54687036294 1046.54576993586 43.914 2 -1.0987941917278028 0.3460534940812051 1.0 ['nc|ENSG00000264575|Q96FQ7|LINC00526', 'ENST00000581067.1_1_18:5237365-5237662:-|nuORF'] 102503 15651 SLVLSPGACTL True PC9_epitope_Rep4 1059.56343194387 1059.5623299358601 68.129 2 -1.0988018305140883 0.3460534940812051 1.0 ['ENST00000593726.5_1_19:41305476-41306130:+|nuORF'] 28034 10297 FQQQQTATL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 44.555 2 -1.098876549370242 0.3460534940812051 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF'] 65138 10932 LQNRRLFQSLH True NCI_RA007_Epitope_Rep2 1410.7844152896998 1410.7833099358602 47.13 2 -1.0989317611317706 0.34607376943837553 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 124593 12065 VGVTSNLF True PC9_epitope_Rep5 835.44396843419 835.44286993586 51.403 2 -1.098953185438673 0.34607376943837553 1.0 ['ENST00000555787.1_1_14:90736495-90738748:+|nuORF'] 64494 21919 LPQPPRESP True PC9_epitope_Rep1 1019.53999407735 1019.53888993586 89.128 2 -1.0990399814650067 0.34607376943837553 1.0 ['JPH2|p.T601Nfs*41|1|0.4|ENSG00000149596|chr20:44115873-44115874|-/T|frameshift_variant', 'ENSG00000149596|ENST00000372980|JPH2'] 28350 4212 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 21.527 2 -1.0990423612751223 0.34607376943837553 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 26659 19347 FIRELEEALCP True PC9_epitope_Rep2 1318.6591232338599 1318.6580299358602 79.793 2 -1.099052617574615 0.34607376943837553 1.0 ['nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1', 'ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1'] 61628 9752 LKPEPTKTF True PC9_epitope_Rep1 1059.5964463243101 1059.5953499358602 42.37 2 -1.099081570110778 0.34607376943837553 1.0 ['TEX35|p.G145Efs*45|1|0.13|ENSG00000240021|chr1:178520764-178520764|G/-|frameshift_variant', 'nc|ENSG00000240021|Q5T0J7-3|TEX35', 'nc|ENSG00000240021|Q5T0J7-5|TEX35', 'nc|ENSG00000240021|Q5T0J7-2|TEX35', 'ENSG00000240021|ENST00000319416|TEX35'] 29521 11732 FVGRLYQVEY True H1975_Epitope_Rep1 1272.65027280232 1272.64916993586 50.119 2 -1.0991054512188863 0.34607376943837553 1.0 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF'] 60785 26503 LHSKLISGG True PC9_epitope_Rep5 910.52361573722 910.52250993586 107.92 2 -1.0991319458538358 0.3460950251249823 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 65140 10050 LQNRRLFQSLH True NCI_RA007_Epitope_Rep3 1410.7844152896998 1410.7833099358602 46.626 2 -1.099264342627311 0.34611777101080576 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 130478 7349 VSPPAAPAAP True PC9_epitope_Rep6 876.4705175351999 876.46942993586 37.445 2 -1.0992654226268124 0.34611777101080576 1.0 ['nc|ENSG00000115419|O94925-3|GLS', 'ENSG00000115419|ENST00000320717|GLS', 'nc|ENSG00000115419|O94925-2|GLS', 'ENST00000479552.1_1_2:191745810-191759998:+|nuORF', 'ENST00000496170.1_1_2:191745882-191760452:+|nuORF'] 69001 11911 LTPRPAIAP True PC9_epitope_Rep2 934.5600012459398 934.55890993586 51.14 2 -1.099271989351683 0.34611777101080576 1.0 ['ENST00000590444.5_1_19:6475849-6475978:-|nuORF', 'ENST00000590818.5_1_19:6475623-6475978:-|nuORF'] 120584 22668 VEGYFHQFF True PC9_epitope_Rep2 1172.52909504048 1172.5279899358602 92.688 2 -1.099274213929934 0.34611777101080576 1.0 ['ENSG00000167346|ENST00000380390|MMP26'] 132924 5005 VVMRYLFA True NCI_RA007_Epitope_Rep3 997.5419086536499 997.54080993586 26.683 2 -1.099316491501578 0.34611777101080576 1.0 ['nc|ENSG00000196220|O43295-2|SRGAP3', 'ENSG00000196220|ENST00000383836|SRGAP3'] 88078 20807 QRRKYFVDV True H1975_Epitope_Rep2 1209.66184054553 1209.66019490379 86.156 3 -1.0993185481187149 0.34611777101080576 1.0 ['ENSG00000139287|ENST00000333850|TPH2', 'nc|ENSG00000139287|Q8IWU9-2|TPH2'] 22668 13557 ETPVTLQAPP True H1975_Epitope_Rep2 1051.55497543515 1051.5538699358601 57.284 2 -1.099319977896168 0.34611777101080576 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 66921 11491 LSNPPTPP True PC9_epitope_Rep1 821.42831837005 821.4272299358599 49.08 2 -1.099338247580333 0.34611777101080576 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D'] 41329 19480 HVYHIYCLVAM True PC9_epitope_Rep3 1347.6467847283502 1347.6456899358602 80.159 2 -1.0993932698800997 0.34611777101080576 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 85337 6047 QESSYVCDE True H1975_Epitope_Rep3 1058.38625542754 1058.38514993586 28.273 2 -1.0994275032312766 0.34611777101080576 1.0 ['nc|ENSG00000157429|P17023-2|ZNF19', 'ENSG00000157429|ENST00000288177|ZNF19'] 142917 8833 YYVYTQQELKE True H1975_Epitope_Rep3 1462.6980108403798 1462.69690993586 38.982 2 -1.0994721028208327 0.34611777101080576 1.0 ['ENSG00000147459|ENST00000276440|DOCK5', 'ENST00000467709.6_1_8:25227083-25246387:+|nuORF'] 122751 10480 VGGLGAGG True H1975_Epitope_Rep1 586.30747496138 586.3069249679301 45.266 1 -1.0995015248968683 0.34611777101080576 1.0 ['ENSG00000185915|ENST00000379499|KLHL34'] 119754 4183 VAYHGHGVSA True PC9_epitope_Rep1 996.4777281739598 996.47662993586 20.985 2 -1.0995035501534947 0.34611777101080576 1.0 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 99861 16502 SILNNPIVKA True PC9_epitope_Rep6 1067.63389446219 1067.63278993586 75.905 2 -1.099506520110725 0.34611777101080576 1.0 ['ENSG00000162664|ENST00000340281|ZNF326', 'nc|ENSG00000162664|Q5BKZ1-3|ZNF326', 'ENST00000394583.7_1_1:90470639-90493257:+|nuORF'] 128610 17177 VPTVPVKN True PC9_epitope_Rep2 852.50690304392 852.50580993586 71.331 2 -1.099508660752643 0.34611777101080576 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 46248 7614 ISNQVIESKE True H1975_Epitope_Rep1 1145.5928174958499 1145.59172993586 34.276 2 -1.099548421211603 0.34611777101080576 1.0 ['ENSG00000188738|ENST00000424728|FSIP2'] 106869 21260 SVCLSLRLV True PC9_epitope_Rep2 988.5739370579199 988.57282993586 87.237 2 -1.0995542959660243 0.34611777101080576 1.0 ['ENST00000443023.5_1_2:200322266-200322902:-|nuORF'] 2314 5232 AEPEPWADAVP True H1975_Epitope_Rep2 1180.540053647 1180.53894993586 25.192 2 -1.0995594272539495 0.34611777101080576 1.0 ['ENST00000249601.8_1_10:49791013-49812893:-|nuORF', 'ENST00000435790.6_1_10:49791013-49860397:-|nuORF'] 134987 9756 WCRCDSTAF True PC9_epitope_Rep4 1087.42153582079 1087.42042993586 45.165 2 -1.0995882591383395 0.3461390209430811 1.0 ['nc|ENSG00000152092|O14525-3|ASTN1', 'ENSG00000152092|ENST00000361833|ASTN1', 'nc|ENSG00000152092|O14525|ASTN1', 'ASTN1|p.E1000D|1|0.41|ENSG00000152092|chr1:176888145-176888145|C/A|missense_variant'] 67331 6484 LSSELAKER True NCI_RA007_Epitope_Rep1 1031.56112344475 1031.56002993586 29.241 2 -1.0996195670379312 0.3461429746119848 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19', 'nc|ENSG00000172046|O94966-4|USP19', 'nc|ENSG00000172046|O94966-3|USP19', 'nc|ENSG00000172046|O94966-7|USP19', 'ENSG00000172046|ENST00000417901|USP19'] 16462 14651 EELFREYKL True H1975_Epitope_Rep1 1225.63428838501 1225.6331899358602 61.567 2 -1.0996400785824052 0.3461429746119848 1.0 ['ENST00000561606.1_1_5:10352943-10353066:-|nuORF'] 129611 25440 VRPAIPGGG True PC9_epitope_Rep3 822.4711862415398 822.47008993586 103.3 2 -1.0996623567686525 0.34615137538062263 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 77445 11135 NSSFTLGISP True H1975_Epitope_Rep3 1021.5080252427299 1021.50692993586 47.927 2 -1.099807836726004 0.34619831950047536 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|208|3|anti-sense'] 100980 6968 SLFRSLLERY True PC9_epitope_Rep3 1282.70337100434 1282.70173490379 31.815 3 -1.0998789159615563 0.34622796649365334 1.0 ['nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 76121 1231 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 6.8163 3 -1.0998969641546281 0.34622796649365334 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 9678 13660 AYFGFSVAATD True PC9_epitope_Rep5 1147.51858992643 1147.5169349037901 57.566 3 -1.0999147097280038 0.346236365738659 1.0 ['ITGAV|p.E791Sfs*22|1|0.15|ENSG00000138448|chr2:186667712-186667712|G/-|frameshift_variant', 'nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV'] 129615 25826 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 104.76 2 -1.099927494520041 0.34624031655082926 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 60780 26761 LHSKLISGG True PC9_epitope_Rep1 910.52361573722 910.52250993586 108.83 2 -1.099934132434956 0.34624031655082926 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 139847 7282 YPNSGSVSA True PC9_epitope_Rep5 880.39266113732 880.3921149679301 32.974 1 -1.0999512472577833 0.3462487153134635 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 129610 25744 VRPAIPGGG True PC9_epitope_Rep1 822.4711862415398 822.47008993586 104.08 2 -1.10002952518944 0.3462610639363848 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 67470 7548 LSSSMPLR True PC9_epitope_Rep5 889.46913763621 889.46804993586 33.983 2 -1.1000329885077524 0.3462610639363848 1.0 ['RYR2|p.L1658Sfs*49|1|0.23|ENSG00000198626|chr1:237614100-237614100|C/-|frameshift_variant'] 47108 16245 ITTRPNRIYMT True PC9_epitope_Rep2 1364.7234548259198 1364.7223499358602 67.73 2 -1.1000582842401088 0.3462610639363848 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 65043 8057 LQKQKKQL True NCI_RA007_Epitope_Rep4 1012.6393141957999 1012.63820993586 37.766 2 -1.1000648384012786 0.3462650138094932 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 39715 14195 HLTWDLLSL True PC9_epitope_Rep1 1096.59169529704 1096.5905899358602 59.423 2 -1.1000784333244706 0.3462650138094932 1.0 ['ENST00000457685.6_1_20:45141455-45141713:-|nuORF'] 13306 12659 DLTQKREL True PC9_epitope_Rep6 1001.55055876105 1001.54946993586 60.159 2 -1.1001206214031318 0.34629910335791175 1.0 ['ENSG00000112561|ENST00000373033|TFEB', 'nc|ENSG00000112561|P19484-2|TFEB'] 113451 13312 TLSQSVILP True PC9_epitope_Rep2 956.5542471591599 956.55314993586 56.479 2 -1.1001911933127315 0.3463450348734153 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 5358 17077 ALRWRKRRWEW True H1975_Epitope_Rep3 1641.9116814914896 1641.9105899358601 71.297 2 -1.1002378141066689 0.3463450348734153 1.0 ['ENST00000456291.1_3_9:123638279-123638699:-|nuORF'] 122615 2709 VGFRCRGH True PC9_epitope_Rep3 930.4606386411799 930.45954993586 14.881 2 -1.1002441499969564 0.3463450348734153 1.0 ['ENSG00000138593|ENST00000559471|SECISBP2L'] 129607 25162 VRPAIPGGG True NCI_RA007_Epitope_Rep1 822.4711862415398 822.47008993586 104.12 2 -1.1002756358972314 0.3463450348734153 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 129608 24041 VRPAIPGGG True NCI_RA007_Epitope_Rep3 822.4711862415398 822.47008993586 104.12 2 -1.1002934590016658 0.3463450348734153 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 15382 13050 EAHNFTDGFSL True PC9_epitope_Rep5 1236.54111627616 1236.54000993586 55.201 2 -1.1003372388653996 0.3463450348734153 1.0 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000546398.5_1_12:95611596-95687545:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 16597 6590 EENFLWMPAL True PC9_epitope_Rep5 1248.58489566444 1248.58378993586 30.319 2 -1.1003519266172346 0.3463450348734153 1.0 ['ENST00000360317.7_1_17:38073357-38073465:-|nuORF'] 68907 6651 LTNQMKHPVLW True NCI_RA007_Epitope_Rep5 1365.72272654993 1365.7210949037901 32.253 3 -1.1004491178941755 0.34636182647228825 1.0 ['ENST00000454679.6_2_10:19569053-19613005:+|nuORF'] 7580 8426 ASEVYLTAYK True H1975_Epitope_Rep1 1143.58119018299 1143.58008993586 37.338 2 -1.1005080491236194 0.34636182647228825 1.0 ['ENST00000523153.2_1_8:54885384-54885555:+|nuORF'] 135146 15528 WEKWLRWYVEK True NCI_RA007_Epitope_Rep2 1621.84053318349 1621.8394299358602 65.106 2 -1.1006608407982024 0.3464255439389658 1.0 ['ENST00000580496.1_1_17:61713981-61714308:+|nuORF'] 61320 15685 LIRFHIHRNVI True NCI_RA007_Epitope_Rep2 1416.84662162344 1416.8455299358602 65.727 2 -1.1006687150013867 0.3464255439389658 1.0 ['AKR1B10|p.Q255H|1|0.24|ENSG00000198074|chr7:134538217-134538217|G/C|missense_variant'] 10522 6279 CLCCVPYHQAF True NCI_RA007_Epitope_Rep4 1282.52970637078 1282.52860993586 30.755 2 -1.1006768516068233 0.3464255439389658 1.0 ['ENST00000458210.7_1_19:19645671-19648330:+|nuORF'] 83235 13141 PSVTWLPSY True PC9_epitope_Rep2 1048.52294703088 1048.52184993586 55.819 2 -1.1007861630052036 0.34644678200336504 1.0 ['ENST00000602775.5_1_5:139929747-139930248:-|nuORF'] 65716 8541 LSC[Carbamidomethyl]HLQCP True H1975_Epitope_Rep3 956.42080782423 956.4197099358599 37.841 2 -1.1007996297170939 0.3464551759568456 1.0 ['ENST00000329138.8_1_17:79668995-79669127:+|nuORF'] 80588 8595 PGPVPREP True PC9_epitope_Rep2 847.4552018242299 847.45410993586 38.422 2 -1.1008401655641271 0.34646356969471237 1.0 ['ENST00000272233.5_1_2:20647813-20648077:+|nuORF'] 30676 5524 GALAQGKA True NCI_RA007_Epitope_Rep5 714.4024379753799 714.4018849679301 27.934 1 -1.1009035427828457 0.3464848064524415 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'ENST00000465356.1_1_21:47860977-47862746:+|nuORF'] 113017 19382 TLMLQCLV True PC9_epitope_Rep5 919.4870961994699 919.48598993586 79.598 2 -1.1009754549753556 0.34650604266468027 1.0 ['nc|ENSG00000112139|Q8NFP4-2|MDGA1', 'ENSG00000112139|ENST00000434837|MDGA1'] 110890 8801 TGSTPAYGYWF True NCI_RA007_Epitope_Rep4 1248.54513902744 1248.54349490379 40.664 3 -1.1010274476770032 0.3465183777258367 1.0 ['nc|ENSG00000142512|Q96LC7-5|SIGLEC10', 'ENST00000524527.1_1_19:51920201-51920835:-|nuORF', 'nc|ENSG00000142512|Q96LC7-8|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-9|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-6|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-7|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-2|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-4|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-3|SIGLEC10', 'ENSG00000142512|ENST00000339313|SIGLEC10'] 72557 22570 MLLSKQFV True PC9_epitope_Rep2 964.5415743004801 964.54046993586 92.309 2 -1.1010652099234595 0.3465183777258367 1.0 ['ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3', 'ENSG00000137100|ENST00000259632|DCTN3'] 18949 13353 ELEKGTPEP True PC9_epitope_Rep3 998.4920408254198 998.49094993586 56.397 2 -1.1010851484753839 0.3465183777258367 1.0 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP', 'ENST00000460963.5_1_2:220250088-220252486:-|nuORF', 'ENST00000522421.1_1_2:220250088-220250490:-|nuORF'] 3489 4012 AGLLAPLGG True NCI_RA007_Epitope_Rep5 767.45413919507 767.45304993586 21.828 2 -1.1011152519718792 0.34653516206914264 1.0 ['ENSG00000205922|ENST00000382349|ONECUT3'] 128183 16816 VPLTTLKNI True PC9_epitope_Rep3 997.61718176889 997.61608993586 69.835 2 -1.101127128143866 0.34653516206914264 1.0 ['ENSG00000176809|ENST00000584306|LRRC37A3', 'ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'SMURF2-LRRC37A3|2|fusion', 'SMURF2-LRRC37A3|1|fusion'] 63444 12328 LLVSSDHL True PC9_epitope_Rep5 882.4810822189002 882.47998993586 52.413 2 -1.101216891668139 0.34658208016026915 1.0 ['ENST00000546677.1_1_12:72083426-72090218:+|nuORF'] 107221 1598 SVISNIRNQME True H1975_Epitope_Rep3 1289.63978477161 1289.63812490379 8.5895 3 -1.1012570286127603 0.34658996057683666 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 18524 12641 EKIWHHIFHNE True NCI_RA007_Epitope_Rep1 1488.7262317072398 1488.7251299358602 53.151 2 -1.1012906195616867 0.34658996057683666 1.0 ['ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 98663 5754 SGCACGCGCE True PC9_epitope_Rep4 888.2234302612 888.22232993586 28.968 2 -1.1013003822919722 0.34658996057683666 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 127450 12397 VNIQAQAQSI True PC9_epitope_Rep2 1070.5720224816198 1070.57092993586 52.994 2 -1.1013041949412916 0.34658996057683666 1.0 ['ENSG00000170920|ENST00000305444|OR7G3'] 122432 9943 VGDVILEVNGY True NCI_RA007_Epitope_Rep3 1176.60265390356 1176.60100490379 46.192 3 -1.1013823697529068 0.34661119243906824 1.0 ['nc|ENSG00000172367|Q86UT5-3|NHERF4', 'ENSG00000172367|ENST00000355547|NHERF4', 'nc|ENSG00000172367|Q86UT5|NHERF4'] 65135 10382 LQNRRLFQSLH True H1975_Epitope_Rep3 1410.7844152896998 1410.7833099358602 44.99 2 -1.101403120024774 0.34661958266452647 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 18446 11066 EIYPIVIHVE True H1975_Epitope_Rep3 1210.65977485686 1210.6586699358602 47.657 2 -1.1014534193695797 0.34664081360110943 1.0 ['ENSG00000100065|ENST00000251973|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF', 'nc|ENSG00000100065|Q9BWT7-2|CARD10'] 85628 17477 QGKRKTSI True PC9_epitope_Rep3 916.54541381096 916.54430993586 72.404 2 -1.1014655845480177 0.3466447520480752 1.0 ['ENSG00000102362|ENST00000372989|SYTL4', 'ENST00000372981.1_1_X:99941666-99941798:-|nuORF'] 57287 20041 LEAAEFLERRE True H1975_Epitope_Rep3 1361.69392851945 1361.6928299358601 83.879 2 -1.1014691330265713 0.3466447520480752 1.0 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF', 'nc|ENSG00000119950|P50539|MXI1'] 50091 24419 KKIAFRLKK True PC9_epitope_Rep5 1130.7651834152598 1130.76408993586 98.966 2 -1.1015023403771245 0.3466531414116771 1.0 ['ENSG00000205327|ENST00000548615|OR6C68'] 141046 11677 YSLLVKNI True NCI_RA007_Epitope_Rep3 948.56441792004 948.56332993586 53.05 2 -1.1015340769214992 0.34665707939035195 1.0 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 11070 10044 DAWAEPHLE True H1975_Epitope_Rep2 1066.47197408718 1066.47086993586 43.627 2 -1.1015448332364963 0.34665707939035195 1.0 ['ENSG00000050767|ENST00000390654|COL23A1'] 91074 5175 RFLQWTELLDP True H1975_Epitope_Rep3 1416.7401504358797 1416.73849490379 25.007 3 -1.1015644053618117 0.3466801889699086 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'ENST00000461438.5_1_10:120917240-120925159:-|nuORF'] 28255 21405 FRLRRMLFP True H1975_Epitope_Rep2 1234.7121022965798 1234.7110099358601 88.566 2 -1.1015784409774245 0.3466801889699086 1.0 ['ENST00000537087.5_1_12:7053133-7053220:+|nuORF'] 57464 18124 LECREPLL True PC9_epitope_Rep3 971.5110024481899 971.50990993586 74.913 2 -1.1015913034711335 0.3466801889699086 1.0 ['ENSG00000154122|ENST00000284268|ANKH', 'ENST00000503939.5_1_5:14741448-14751330:-|nuORF', 'ANKH|p.P193L|1|0.07|ENSG00000154122|chr5:14751178-14751178|G/A|missense_variant'] 46111 7568 ISICQVHKNME True H1975_Epitope_Rep1 1300.62677755976 1300.62566993586 34.101 2 -1.1016142206992858 0.3466801889699086 1.0 ['nc|ENSG00000165115|Q86VH2-3|KIF27', 'nc|ENSG00000165115|Q86VH2-2|KIF27', 'ENSG00000165115|ENST00000297814|KIF27'] 18002 12756 EIDRRLEKKLK True H1975_Epitope_Rep3 1426.8619969040599 1426.86088993586 54.279 2 -1.1016195195732315 0.3466801889699086 1.0 ['nc|ENSG00000055070|Q7Z422-5|SZRD1', 'ENSG00000055070|ENST00000401088|SZRD1', 'ENST00000472461.1_1_1:16694381-16721632:+|nuORF'] 125467 25912 VIVLSVTTESK True PC9_epitope_Rep5 1174.68090422426 1174.67980993586 105.15 2 -1.101658566479536 0.3466801889699086 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 81759 10362 PLPIIWLK True NCI_RA007_Epitope_Rep3 978.6266242537799 978.62552993586 47.822 2 -1.1016619991712262 0.3466801889699086 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 81235 13710 PKIKELMC True NCI_RA007_Epitope_Rep4 960.51364530048 960.51254993586 59.957 2 -1.1016765293741069 0.3466801889699086 1.0 ['ZNF578|p.G137C|1|0.3|ENSG00000258405|chr19:52510790-52510790|G/T|missense_variant'] 70743 18200 LWVSEWGHWNR True PC9_epitope_Rep1 1468.7000169593998 1468.69890993586 74.796 2 -1.1017228874645664 0.3466801889699086 1.0 ['ENST00000394893.5_1_7:75615553-75615796:+|nuORF'] 91515 22207 RHYDQDYY True PC9_epitope_Rep3 1158.47303671634 1158.47140490379 90.706 3 -1.1017297331218372 0.3466801889699086 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant', 'ENST00000471538.1_1_1:16200459-16203174:+|nuORF'] 37044 12349 GVPESVKKP True PC9_epitope_Rep3 939.5389314481899 939.53782993586 52.529 2 -1.1017634199205766 0.3466801889699086 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 135044 8248 WDRRRWNFRQK True NCI_RA007_Epitope_Rep2 1646.8654595750597 1646.8643699358602 36.719 2 -1.1018816403810603 0.3466801889699086 1.0 ['ENST00000448841.5_1_10:104575113-104575296:+|nuORF'] 39161 12477 HIANVERVPF True PC9_epitope_Rep4 1180.63529144452 1180.6336349037902 55.8 3 -1.1018860068461458 0.3466801889699086 1.0 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14', 'ENST00000373807.5_1_9:124074589-124093809:+|nuORF'] 132138 13945 VTVGGFIF True NCI_RA007_Epitope_Rep3 838.45889022234 838.4583449679301 62.163 1 -1.1018978238319654 0.3466801889699086 1.0 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENST00000527026.1_1_11:48166660-48171041:+|nuORF'] 59323 23315 LFIFHIKVF True PC9_epitope_Rep1 1162.6902871394998 1162.6891899358602 94.471 2 -1.101931599388079 0.3466801889699086 1.0 ['ENST00000470773.1_1_2:172182447-172182657:-|nuORF'] 32413 14649 GFSCYCPL True PC9_epitope_Rep3 888.3509966494798 888.34988993586 61.481 2 -1.1020245784466187 0.3467399257994531 1.0 ['ENST00000315970.11_1_12:58114859-58115021:+|nuORF'] 116121 20879 TSSKGKKGKK True PC9_epitope_Rep6 1047.6400424717897 1047.63947496793 93.085 1 -1.1020957074361732 0.34676114919510126 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 28347 3753 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 19.701 2 -1.1021235350501943 0.34676953491058937 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 100559 15238 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 66.543 2 -1.1021530482988717 0.34677792041078304 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 80 6212 AAAKGRLN True PC9_epitope_Rep5 799.46643521427 799.46532993586 28.876 2 -1.102271606619042 0.34683765291844776 1.0 ['ENSG00000100227|ENST00000252115|POLDIP3', 'nc|ENSG00000100227|Q9BY77-2|POLDIP3'] 42561 21179 IEEYAKKRI True PC9_epitope_Rep1 1148.65535818276 1148.6542699358602 86.3 2 -1.102311858752317 0.3468756418155679 1.0 ['ENST00000451107.3_1_12:95475298-95611245:-|nuORF', 'ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6'] 93941 20619 RRGSRPRKIVD True NCI_RA007_Epitope_Rep5 1338.79564867974 1338.79399490379 86.252 3 -1.1023501707069678 0.3468756418155679 1.0 ['nc|ENSG00000049449|Q15293-2|RCN1'] 61923 15098 LLDFKQKHPRK True H1975_Epitope_Rep1 1408.8303028529597 1408.82920993586 63.329 2 -1.1023996433595415 0.3468756418155679 1.0 ['nc|ENSG00000187010|Q02161-6|RHD', 'nc|ENSG00000188672|P18577-6|RHCE', 'nc|ENSG00000187010|Q02161-5|RHD'] 139706 14365 YNLTIDNF True NCI_RA007_Epitope_Rep4 998.4709114580199 998.46980993586 62.562 2 -1.1024243240871578 0.34689686156215904 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.A1711Lfs*3|1|0.11|ENSG00000042781|chr1:216084735-216084735|G/-|frameshift_variant'] 125104 6159 VIERPYECK True NCI_RA007_Epitope_Rep3 1135.5695799534699 1135.56793490379 31.227 3 -1.1024444568550724 0.34691808076399766 1.0 ['ENSG00000189144|ENST00000536220|ZNF573', 'nc|ENSG00000189144|Q86YE8-2|ZNF573', 'nc|ENSG00000189144|Q86YE8-4|ZNF573', 'nc|ENSG00000189144|Q86YE8-3|ZNF573'] 78091 14811 NVYAQYDSGL True PC9_epitope_Rep2 1128.50875351872 1128.50710490379 62.235 3 -1.1025020693005863 0.3469298695964678 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 116134 10446 TSSSACPL True NCI_RA007_Epitope_Rep5 764.33745476032 764.3369049679301 46.812 1 -1.1025191302822959 0.3469298695964678 1.0 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2'] 129417 24771 VRFNPHTY True H1975_Epitope_Rep1 1032.5141136826799 1032.51300993586 102.6 2 -1.102562026183684 0.3469298695964678 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5'] 87031 6355 QMRWRNEKDVW True H1975_Epitope_Rep3 1546.7463155288199 1546.7452099358602 29.436 2 -1.1026103244166312 0.3469298695964678 1.0 ['ENST00000225388.8_1_17:27585167-27585341:-|nuORF'] 23539 19055 EVVWGPDSHL True PC9_epitope_Rep4 1137.5454733806098 1137.54436993586 81.385 2 -1.1026154527220031 0.3469298695964678 1.0 ['ENSG00000184956|ENST00000421673|MUC6', 'MUC6|p.Q711Kfs*41|1|0.07|ENSG00000184956|chr11:1027368-1027368|G/-|frameshift_variant'] 102265 17398 SLSKKRKK True NCI_RA007_Epitope_Rep4 973.63964854897 973.63910496793 75.337 1 -1.1026364292759177 0.3469298695964678 1.0 ['FAM133A|p.A206Qfs*17|1|0.23|ENSG00000179083|chrX:93710035-93710035|G/-|frameshift_variant', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|169|22.93|0.52|5.45|+|ENST00000332647|FAM133A,FAM133A'] 136256 20029 WRWRPFLKKWT True NCI_RA007_Epitope_Rep3 1602.8935718158598 1602.8924699358602 87.283 2 -1.1026698907775818 0.34695056214384723 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 41921 9531 IDCDYFYENQ True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 41.518 2 -1.1026937657748868 0.34695056214384723 1.0 ['AKR1B15|p.A74D|1|0.39|ENSG00000227471|chr7:134568228-134568228|C/A|missense_variant'] 125231 23603 VIKARKLPP True NCI_RA007_Epitope_Rep4 1020.6807850849599 1020.67968993586 102.39 2 -1.1026954411422576 0.34695056214384723 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 138338 18642 YHEHLRKDLPS True NCI_RA007_Epitope_Rep1 1393.7102472899298 1393.70914993586 76.651 2 -1.1026964705012678 0.34695056214384723 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 21075 8521 EQWEMHRLEKE True PC9_epitope_Rep4 1513.6983622768896 1513.69726993586 40.252 2 -1.102999303412234 0.34706161684869796 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 95528 20300 RWRLPLTCLLL True NCI_RA007_Epitope_Rep5 1382.82204666838 1382.8204049037902 85.023 3 -1.1030237873867472 0.3470828306681383 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 36283 15597 GVDYPRPIV True PC9_epitope_Rep2 1014.5498304850598 1014.54872993586 65.271 2 -1.1030736409361053 0.3470912101027991 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 68669 12738 LTIYSSRSLIG True H1975_Epitope_Rep1 1208.67648755016 1208.67538993586 54.056 2 -1.1031270303506238 0.34715092402464065 1.0 ['ENST00000401878.7_2_7:155573289-155573589:+|nuORF'] 123104 9037 VGKIFSNVRI True PC9_epitope_Rep6 1131.67642798051 1131.67477490379 44.805 3 -1.1032163905872236 0.3471543150465191 1.0 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 122471 16318 VGEFVYKLLK True NCI_RA007_Epitope_Rep3 1194.7012457460198 1194.70014993586 71.887 2 -1.1032337138062267 0.3471543150465191 1.0 ['GRIK3|p.R848L|1|0.33|ENSG00000163873|chr1:36805009-36805009|C/A|missense_variant'] 39867 11000 HPAREGPGSR True PC9_epitope_Rep5 1062.5318890051399 1062.5307899358602 47.299 2 -1.103246121041626 0.3471543150465191 1.0 ['ENST00000264560.11_1_19:746959-747340:+|nuORF'] 101346 9177 SLISWWLPESA True PC9_epitope_Rep1 1287.64993844915 1287.6488499358602 40.149 2 -1.103255642284938 0.3471543150465191 1.0 ['ENSG00000168065|ENST00000301891|SLC22A11', 'nc|ENSG00000168065|Q9NSA0-2|SLC22A11'] 45108 19744 IPLIERLQRN True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74426490379 82.856 3 -1.1033214516666192 0.3471543150465191 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 137885 18169 YEVFDPTRP True PC9_epitope_Rep1 1122.53457434374 1122.53346993586 74.677 2 -1.1034562346310213 0.34717499262148876 1.0 ['nc|ENSG00000154027|Q9Y6K8-3|AK5', 'ENSG00000154027|ENST00000354567|AK5', 'ENST00000466114.1_1_1:77759479-77763674:+|nuORF', 'ENST00000317704.8_1_1:77747869-77779575:+|nuORF'] 60271 7143 LGRNSGSALY True H1975_Epitope_Rep3 1036.53015766964 1036.5290699358602 32.448 2 -1.103478365310658 0.34717499262148876 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 82268 11469 PPGGGGAGG True NCI_RA007_Epitope_Rep3 625.28198848953 625.2814349679301 52.232 1 -1.1035027562536026 0.34717499262148876 1.0 ['ENST00000478597.5_1_9:140007734-140009165:-|nuORF'] 36743 9112 GVKGAKIK True PC9_epitope_Rep5 799.5279728416699 799.52686993586 39.995 2 -1.1035246666991265 0.34717499262148876 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 142539 23342 YYKKTLLLAR True PC9_epitope_Rep3 1267.7652429849097 1267.76467496793 95.064 1 -1.1035700603735312 0.34719620171949184 1.0 ['GPSM2|p.K514Rfs*17|1|0.1|ENSG00000121957|chr1:108922514-108922514|A/-|frameshift_variant', 'ENSG00000121957|ENST00000264126|GPSM2'] 118945 7252 VADTFQDYFG True H1975_Epitope_Rep3 1161.4978544818498 1161.4967499358602 32.867 2 -1.1036804335271404 0.3472559058654451 1.0 ['ENSG00000185009|ENST00000355264|AP3M1'] 111539 15796 TIAHLFNVE True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 66.022 2 -1.1037570041531723 0.3472765766343748 1.0 ['CYBB|p.Y425*|1|0.29|ENSG00000165168|chrX:37805129-37805129|C/-|frameshift_variant', 'ENSG00000165168|ENST00000378588|CYBB'] 136112 14379 WRLWTRWPSWP True PC9_epitope_Rep1 1569.79933707785 1569.7982499358602 60.132 2 -1.1037670068155454 0.3472765766343748 1.0 ['SLC9A3|p.G138Afs*82|1|0.38|ENSG00000066230|chr5:491870-491870|C/-|frameshift_variant'] 112531 11936 TLDYQRMY True H1975_Epitope_Rep1 1088.49608066004 1088.49498993586 50.915 2 -1.1037978109740079 0.3472765766343748 1.0 ['nc|ENSG00000099204|O14639-2|ABLIM1', 'nc|ENSG00000099204|O14639-6|ABLIM1', 'ENSG00000099204|ENST00000533213|ABLIM1'] 120728 10950 VEKLREVK True PC9_epitope_Rep1 999.60767971435 999.60658993586 47.008 2 -1.1037982933298744 0.3472765766343748 1.0 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'TRIM5|p.P435Qfs*11|1|0.07|ENSG00000132256|chr11:5664987-5664988|-/CCCCTTCT|frameshift_variant', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 9398 9887 AVSYAHILC True H1975_Epitope_Rep1 975.4847877003499 975.48368993586 42.964 2 -1.103850748736187 0.34728049578505715 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 110582 23905 TFRRWHQKRRK True PC9_epitope_Rep5 1597.9178295010895 1597.91672993586 96.932 2 -1.1038517603949096 0.34728049578505715 1.0 ['ENST00000467796.5_1_22:51221718-51237143:+|nuORF', 'ENST00000480246.1_1_22:51222460-51237143:+|nuORF'] 100635 12249 SLDERIYV True PC9_epitope_Rep4 993.5131106231698 993.51200993586 54.932 2 -1.1038853768158827 0.34728441473460014 1.0 ['ENSG00000170860|ENST00000306024|LSM3'] 41705 11452 IAIYQRKVE True PC9_epitope_Rep3 1118.64479349906 1118.64368993586 49.048 2 -1.1039336627377254 0.34728441473460014 1.0 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'nc|ENSG00000142875|P22694-10|PRKACB', 'nc|ENSG00000142875|P22694-4|PRKACB', 'nc|ENSG00000142875|P22694-3|PRKACB', 'nc|ENSG00000142875|P22694|PRKACB', 'nc|ENSG00000142875|P22694-5|PRKACB', 'nc|ENSG00000142875|P22694-7|PRKACB', 'nc|ENSG00000142875|P22694-6|PRKACB', 'nc|ENSG00000142875|P22694-9|PRKACB', 'ENSG00000142875|ENST00000370685|PRKACB'] 15335 5959 EAGDQDSREVR True H1975_Epitope_Rep1 1260.56945628232 1260.5683499358602 27.993 2 -1.103982458811961 0.34729278932512186 1.0 ['nc|ENSG00000155903|Q15283|RASA2', 'ENSG00000155903|ENST00000286364|RASA2', 'RASA2|p.T476Lfs*2|1|0.15|ENSG00000155903|chr3:141574006-141574006|C/-|frameshift_variant'] 10389 4102 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 20.677 2 -1.1040125084932484 0.3473139939184768 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 32926 16223 GHYTEPYASSQ True PC9_epitope_Rep4 1238.5203808315798 1238.51872490379 70.344 3 -1.104093752325986 0.34734802802083603 1.0 ['PTPN21|p.D800Vfs*50|1|0.07|ENSG00000070778|chr14:88479022-88479032|CGTGGTGAGGT/-|frameshift_variant', 'ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 65139 11024 LQNRRLFQSLH True NCI_RA007_Epitope_Rep2 1410.7844152896998 1410.7833099358602 47.482 2 -1.1041120657230497 0.3473564014728712 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 118710 9944 TYTFSLEGSG True PC9_epitope_Rep5 1060.47130538084 1060.47020993586 43.223 2 -1.1041350356121054 0.34736477471004823 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2', 'RIN2|p.P358Tfs*9|1|0.44|ENSG00000132669|chr20:19974942-19974943|-/A|frameshift_variant'] 125345 19236 VIQELQDRR True PC9_epitope_Rep4 1155.63601972051 1155.63492993586 82.091 2 -1.1042353661765067 0.3473709865695191 1.0 ['ENST00000373672.7_1_1:32120449-32122662:-|nuORF'] 41671 12401 IAGLALLRNPE True NCI_RA007_Epitope_Rep1 1165.68190728377 1165.68080993586 52.212 2 -1.1042391747168312 0.3473709865695191 1.0 ['nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13', 'nc|ENSG00000010165|Q8N6R0-1|METTL13', 'nc|ENSG00000010165|Q8N6R0-3|METTL13', 'ENST00000478330.1_1_1:171757000-171759833:+|nuORF'] 131097 21092 VTEAVLKFL True PC9_epitope_Rep5 1018.6062827320198 1018.60518993586 86.193 2 -1.1042615354625385 0.3473709865695191 1.0 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 46278 6200 ISPLSDASLDL True NCI_RA007_Epitope_Rep4 1129.58666948625 1129.5855699358601 30.458 2 -1.1042666677527193 0.3473709865695191 1.0 ['GLI2|p.V1154*|1|0.27|ENSG00000074047|chr2:120989372-120989372|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'GLI2|p.H275Ifs*26|1|0.43|ENSG00000074047|chr2:120968890-120968890|G/-|frameshift_variant', 'GLI2|p.K597Rfs*98|1|0.25|ENSG00000074047|chr2:120984574-120984574|C/-|frameshift_variant', 'nc|ENSG00000111087|P08151-2|GLI1', 'ENSG00000111087|ENST00000228682|GLI1'] 33397 12564 GLADIPCLVI True PC9_epitope_Rep5 1012.56270366788 1012.56160993586 53.328 2 -1.1042902783409854 0.3473709865695191 1.0 ['nc|ENSG00000148840|Q5VV67-2|PPRC1', 'PPRC1|p.R1619Qfs*24|1|0.06|ENSG00000148840|chr10:102149294-102149294|G/-|frameshift_variant', 'ENSG00000148840|ENST00000278070|PPRC1'] 60371 6403 LGTCEEWIEL True PC9_epitope_Rep2 1191.5481758025498 1191.54652490379 30.036 3 -1.1042929272739352 0.3473709865695191 1.0 ['ICE1|p.S1238L|1|0.18|ENSG00000164151|chr5:5463047-5463047|C/T|missense_variant'] 23537 6964 EVVTPDFQEP True NCI_RA007_Epitope_Rep1 1159.5397192938299 1159.5386299358602 31.091 2 -1.1043086376247078 0.3473709865695191 1.0 ['ENSG00000130287|ENST00000252575|NCAN'] 107753 18065 SVSPPVSIVA True PC9_epitope_Rep6 954.53859709502 954.5380449679301 82.118 1 -1.104309784046923 0.3473709865695191 1.0 ['UBAP2L|p.P748Qfs*19|1|0.42|ENSG00000143569|chr1:154257144-154257144|C/-|frameshift_variant'] 63724 10537 LNDFFSRFWAQ True PC9_epitope_Rep4 1429.67788453249 1429.6762349037901 48.258 3 -1.1043121315056856 0.3473709865695191 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 15324 7830 EAGAAAGG True H1975_Epitope_Rep1 602.26600407222 602.26545496793 35.068 1 -1.1043263979575277 0.3473709865695191 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 137903 4937 YEWWFRWRLDR True NCI_RA007_Epitope_Rep1 1711.8371791385496 1711.83497987172 23.286 4 -1.1043648346474992 0.3473709865695191 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 59650 8137 LGAEPTVRP True PC9_epitope_Rep3 938.5185303567799 938.51742993586 36.278 2 -1.1043863393144697 0.3473709865695191 1.0 ['ENSG00000146216|ENST00000259750|TTBK1', 'TTBK1|p.A1019Pfs*75|1|0.11|ENSG00000146216|chr6:43283794-43283794|G/-|frameshift_variant'] 66315 19703 LSFSWLEEV True PC9_epitope_Rep3 1108.54407639828 1108.5429699358601 81.016 2 -1.1043999478710054 0.3473709865695191 1.0 ['ENST00000307641.9_1_17:40176368-40176479:+|nuORF'] 122303 21791 VGAWVLVL True PC9_epitope_Rep1 855.5218248320699 855.52072993586 88.64 2 -1.1044416349071435 0.3473793581159086 1.0 ['nc|ENSG00000204305|Q15109-3|AGER', 'nc|ENSG00000204305|Q15109-4|AGER', 'nc|ENSG00000204305|Q15109-10|AGER', 'nc|ENSG00000204305|Q15109-7|AGER', 'ENSG00000204305|ENST00000375076|AGER', 'nc|ENSG00000204305|Q15109-6|AGER', 'nc|ENSG00000204305|Q15109-5|AGER', 'nc|ENSG00000204305|Q15109-8|AGER', 'nc|ENSG00000204305|Q15109-2|AGER', 'nc|ENSG00000204305|Q15109-9|AGER'] 85007 10223 QEGDYGRWTIS True H1975_Epitope_Rep1 1310.5891290977397 1310.58802993586 44.265 2 -1.1045304812853414 0.3474000153921141 1.0 ['TDP1|p.G431Lfs*6|1|0.13|ENSG00000042088|chr14:89989062-89989071|CAGGAAAAAG/-|frameshift_variant', 'ENSG00000042088|ENST00000335725|TDP1'] 22976 4996 EVETFLDR True NCI_RA007_Epitope_Rep2 1007.4923751785899 1007.49126993586 24.057 2 -1.1045843000670041 0.3474000153921141 1.0 ['ENSG00000128655|ENST00000286063|PDE11A'] 67248 11268 LSRPGWPYVP True PC9_epitope_Rep2 1170.61857875122 1170.61748993586 48.668 2 -1.1045909287914506 0.3474000153921141 1.0 ['ENST00000517346.1_1_5:167155718-167156009:+|nuORF'] 119808 10570 VDAERLKHLI True NCI_RA007_Epitope_Rep1 1192.6928063206399 1192.6917099358602 45.098 2 -1.1046099925389474 0.3474000153921141 1.0 ['ENSG00000125730|ENST00000245907|C3'] 79829 20700 PEGLKKTLR True PC9_epitope_Rep4 1040.6342288153598 1040.63312993586 87.783 2 -1.104646289213382 0.34740676140152876 1.0 ['nc|ENSG00000116984|Q99707-2|MTR', 'ENSG00000116984|ENST00000366577|MTR', 'MTR|p.Y491Vfs*11|1|0.55|ENSG00000116984|chr1:236838548-236838549|-/A|frameshift_variant'] 33541 13659 GLEERYHRL True PC9_epitope_Rep3 1171.60980497267 1171.60816490379 57.604 3 -1.10476464327945 0.34740676140152876 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164'] 20245 13001 ENLTWYKLV True NCI_RA007_Epitope_Rep5 1164.61791004488 1164.6168099358601 56.686 2 -1.1047785267801127 0.34740676140152876 1.0 ['KDR|p.G587V|1|0.15|ENSG00000128052|chr4:55104870-55104870|C/A|missense_variant'] 45054 7075 IPHPGPPCAL True H1975_Epitope_Rep3 1000.5164221818 1000.51532993586 32.181 2 -1.1047801411995708 0.34740676140152876 1.0 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF'] 91178 2505 RGAGSKRKRR True PC9_epitope_Rep5 1170.71700443622 1170.71536490379 13.862 3 -1.1047984233901618 0.34740676140152876 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 122875 13423 VGHLPSEP True PC9_epitope_Rep2 834.42356734278 834.42246993586 56.915 2 -1.1048306831170345 0.34740676140152876 1.0 ['nc|ENSG00000143450|Q9UMX2-2|OAZ3', 'ENSG00000143450|ENST00000400999|OAZ3'] 89838 5385 RAQGRWAQP True H1975_Epitope_Rep2 1068.5577098301599 1068.55660993586 25.75 2 -1.1048358310491586 0.34740676140152876 1.0 ['ENST00000572050.1_3_17:79211356-79212635:-|nuORF'] 44564 19520 ILPDYYSPA True PC9_epitope_Rep6 1037.5069626135698 1037.5058699358601 87.747 2 -1.1048927974838778 0.34740676140152876 1.0 ['nc|ENSG00000139835|Q5TC63-2|GRTP1', 'ENSG00000139835|ENST00000375431|GRTP1', 'nc|ENSG00000139835|Q5TC63-3|GRTP1'] 48664 23734 KATGEEEG True NCI_RA007_Epitope_Rep5 819.36102665587 819.35992993586 98.636 2 -1.1049036351327182 0.34740676140152876 1.0 ['ENSG00000135521|ENST00000367576|LTV1'] 79578 17793 PDGQQVLTVP True PC9_epitope_Rep3 1052.55022440788 1052.54912993586 73.641 2 -1.1049331080383733 0.34740676140152876 1.0 ['nc|ENSG00000104064|Q06547-4|GABPB1', 'nc|ENSG00000104064|Q06547-3|GABPB1', 'ENSG00000104064|ENST00000380877|GABPB1', 'nc|ENSG00000104064|Q06547|GABPB1'] 136232 9021 WRTWRELVPR True NCI_RA007_Epitope_Rep5 1397.76803694957 1397.76640490379 41.357 3 -1.1049394200781106 0.34741013375739 1.0 ['ENSG00000158113|ENST00000339777|LRRC43'] 63126 12477 LLRGLWQRWRR True NCI_RA007_Epitope_Rep1 1538.9058678350598 1538.9042249037902 52.51 3 -1.1049511259840936 0.34741013375739 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 62823 23277 LLLWLMIP True PC9_epitope_Rep1 997.6034462810499 997.60234993586 94.32 2 -1.1049746907533196 0.34741013375739 1.0 ['ENST00000247833.11_2_12:70132798-70149222:+|nuORF'] 87828 27435 QRFFQGGL True PC9_epitope_Rep1 951.4926499621097 951.49154993586 112.21 2 -1.105014744594763 0.34741013375739 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 46833 9785 ITICVCVIEV True H1975_Epitope_Rep3 1090.57663947986 1090.5755499358602 42.662 2 -1.1050191480208311 0.34741013375739 1.0 ['ENSG00000143119|ENST00000271324|CD53'] 22995 6497 EVEYYYQRALE True NCI_RA007_Epitope_Rep1 1461.6776097489699 1461.6765099358602 29.292 2 -1.105041475218691 0.3474185026545949 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 564 6660 AAQQPHIAGV True PC9_epitope_Rep4 990.5246783663799 990.52358993586 32.791 2 -1.1050767000806478 0.3474268713371549 1.0 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 27517 19005 FMQRHQLLKR True NCI_RA007_Epitope_Rep3 1355.7608433941498 1355.75920490379 83.039 3 -1.1051310878682352 0.3474558883873615 1.0 ['ENSG00000065613|ENST00000369755|SLK', 'nc|ENSG00000065613|Q9H2G2-2|SLK', 'ENST00000474260.1_1_10:105768003-105778705:+|nuORF'] 100562 16072 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 69.756 2 -1.1051740115810578 0.3474558883873615 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 82006 19219 PLVDTHPSPS True NCI_RA007_Epitope_Rep5 1048.5189242796 1048.5178299358602 80.79 2 -1.1051905981130932 0.3474558883873615 1.0 ['ENST00000479202.5_1_21:46306285-46309037:-|nuORF'] 135960 8351 WQGGGGDA True NCI_RA007_Epitope_Rep5 746.2983668296599 746.2978149679301 38.794 1 -1.1052084205295618 0.3474558883873615 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-2|TRAPPC11'] 116033 10694 TSMVTEFLL True PC9_epitope_Rep2 1039.5259838059899 1039.52488993586 46.446 2 -1.1052086232648926 0.3474558883873615 1.0 ['ENSG00000206474|ENST00000444197|OR10C1'] 10395 3568 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 18.8 2 -1.1054187321289475 0.34753619100129507 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 66418 13901 LSGLPDTVFEI True PC9_epitope_Rep5 1189.6230549949698 1189.6219499358601 58.491 2 -1.1054662231972265 0.34753619100129507 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 57721 9370 LEELHVIDVK True NCI_RA007_Epitope_Rep2 1193.6655885132898 1193.66448993586 41.056 2 -1.1054687276578243 0.34753619100129507 1.0 ['ENSG00000167986|ENST00000301764|DDB1', 'DDB1|p.R589Afs*4|1|0.56|ENSG00000167986|chr11:61313959-61313959|A/-|frameshift_variant', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 123032 5031 VGIPGLGPTI True NCI_RA007_Epitope_Rep3 922.5487678559 922.54766993586 26.784 2 -1.1054708484537459 0.34753619100129507 1.0 ['OR51D1|p.H37Y|1|0.14|ENSG00000197428|chr11:4639899-4639899|C/T|missense_variant', 'OR51D1|p.K156Rfs*7|1|0.28|ENSG00000197428|chr11:4640254-4640254|C/-|frameshift_variant', 'ENSG00000197428|ENST00000641817|OR51D1'] 15352 14408 EAGKQEELIK True PC9_epitope_Rep6 1143.6135529404298 1143.61244993586 67.317 2 -1.1054897218033102 0.34753619100129507 1.0 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 115943 13567 TSGTDEGE True H1975_Epitope_Rep3 794.2930066656999 794.2924549679301 57.468 1 -1.1055652327860486 0.34755737915117324 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 29483 8502 FVFEIPLHEMN True H1975_Epitope_Rep1 1374.6642086143 1374.6631099358601 37.634 2 -1.1055834588218072 0.34757411016514517 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 114662 7365 TQEQRMFREN True NCI_RA007_Epitope_Rep2 1337.61463265293 1337.61352993586 33.272 2 -1.1056016646939841 0.34757411016514517 1.0 ['ENSG00000136870|ENST00000339664|ZNF189', 'nc|ENSG00000136870|O75820-3|ZNF189', 'nc|ENSG00000136870|O75820-4|ZNF189', 'nc|ENSG00000136870|O75820-2|ZNF189'] 60303 5428 LGSETAERPPD True H1975_Epitope_Rep3 1170.5516809598598 1170.5505899358602 25.938 2 -1.105660209731631 0.34757801882196065 1.0 ['ENST00000334286.7_1_13:78492715-78492892:-|nuORF'] 28345 3212 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 17.588 2 -1.1056889896979085 0.34757801882196065 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 112735 5578 TLGYHVYPT True PC9_epitope_Rep2 1049.5181960036098 1049.5170899358602 26.846 2 -1.1057452525644171 0.3475902919343052 1.0 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 61286 17469 LIPQRSCSL True PC9_epitope_Rep5 1015.54845058607 1015.54734993586 72.196 2 -1.1057596591733465 0.3475902919343052 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3', 'ENST00000526008.5_1_19:17949989-17958765:-|nuORF', 'nc|ENSG00000105639|P52333-4|JAK3', 'ENST00000527031.5_1_19:17947866-17955268:-|nuORF', 'ENST00000528293.1_1_19:17953965-17958870:-|nuORF'] 11339 15984 DENADWKHSF True NCI_RA007_Epitope_Rep3 1247.52071518475 1247.5196099358602 70.543 2 -1.1058107998794806 0.3475902919343052 1.0 ['FSTL1|p.L213H|1|0.28|ENSG00000163430|chr3:120403298-120403298|A/T|missense_variant'] 16556 6790 EELSLSKEWPG True NCI_RA007_Epitope_Rep2 1273.6190322436898 1273.61792993586 31.028 2 -1.10587066769908 0.3476242980589246 1.0 ['LSP1|p.G144W|1|0.23|ENSG00000130592|chr11:1883492-1883492|G/T|missense_variant'] 10387 3727 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 19.249 2 -1.10590923462239 0.347649389110396 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 128750 14993 VPYKRCFSL True PC9_epitope_Rep5 1111.58483609479 1111.5837299358602 62.673 2 -1.1059428485423715 0.347649389110396 1.0 ['ENST00000454175.1_1_7:99103050-99103296:+|nuORF'] 112492 20288 TLDPDKPSL True PC9_epitope_Rep1 984.51277627 984.51166993586 82.864 2 -1.1059540633322158 0.347649389110396 1.0 ['ENSG00000077585|ENST00000366592|GPR137B'] 36871 23308 GVLLLWLRME True PC9_epitope_Rep2 1228.7002002001998 1228.69967496793 95.13 1 -1.105997206121656 0.34767893542556055 1.0 ['AluSp_dup1142|chr1:32231212-32231509:+|1.2519690523843836|0.2089834518128584|2.58|540.0|22|3|anti-sense'] 133326 1168 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 6.1588 2 -1.1060112745996191 0.34767893542556055 1.0 ['ENSG00000169340|ENST00000302451|PDILT'] 16164 3663 EEDLLYWVD True NCI_RA007_Epitope_Rep4 1180.52882025696 1180.5277299358602 20.192 2 -1.1060812253648897 0.3477001179426696 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant'] 19013 6350 ELESRLHNMLV True H1975_Epitope_Rep1 1339.6918203444702 1339.69018490379 29.485 3 -1.1060971652765843 0.34770848022562656 1.0 ['ENSG00000189108|ENST00000372582|IL1RAPL2'] 22044 10282 ESLKRPWED True NCI_RA007_Epitope_Rep2 1158.5669371011797 1158.5658499358601 44.584 2 -1.106125270975499 0.3477168422941825 1.0 ['ENSG00000029639|ENST00000367166|TFB1M'] 42094 10291 IDLGFGTK True H1975_Epitope_Rep3 849.45961849833 849.4590749679301 44.635 1 -1.10613796371988 0.3477252041483457 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 33230 17788 GKDYDPVAAR True PC9_epitope_Rep1 1090.5407223533398 1090.5396299358601 73.218 2 -1.1061600424847116 0.3477335657881243 1.0 ['ENSG00000101367|ENST00000375571|MAPRE1'] 15417 9154 EAKKTMEEQWT True H1975_Epitope_Rep1 1379.6391160652697 1379.63800993586 40.117 2 -1.1061791553762619 0.3477547462472279 1.0 ['ENST00000607283.5_1_3:53053042-53126502:-|nuORF'] 18077 11836 EIGVQNVKGIH True PC9_epitope_Rep5 1192.65642081192 1192.6553299358602 50.524 2 -1.106268442599702 0.3477714681262899 1.0 ['ENSG00000188342|ENST00000340473|GTF2F2'] 37418 7421 GVTESVLKP True PC9_epitope_Rep6 928.5229470308799 928.52184993586 37.768 2 -1.1062844357579305 0.3477714681262899 1.0 ['KLB|p.S526Y|1|0.19|ENSG00000134962|chr4:39437967-39437967|C/A|missense_variant', 'ENSG00000134962|ENST00000257408|KLB'] 14624 13561 DVAWTSQNL True PC9_epitope_Rep1 1032.4876241513198 1032.48652993586 57.018 2 -1.106307386034557 0.34779264728503306 1.0 ['ENST00000295148.8_1_2:24253218-24253389:-|nuORF'] 10386 3635 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 18.901 2 -1.1063714619983995 0.3478394626536603 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 5247 10088 ALPPELREQTV True PC9_epitope_Rep5 1251.68230120659 1251.6812099358601 43.786 2 -1.1064702385263976 0.3478556230613448 1.0 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112', 'ENST00000498289.5_1_1:169773308-169819597:+|nuORF'] 91175 2569 RGAGSKRKRR True PC9_epitope_Rep3 1170.71700443622 1170.71536490379 14.181 3 -1.1064922081974344 0.3478556230613448 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 72737 21024 MNKAHGCE True NCI_RA007_Epitope_Rep5 888.3582072882399 888.35710993586 87.879 2 -1.106502342896786 0.3478556230613448 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 82003 9829 PLVAHVAS True PC9_epitope_Rep4 792.4493881678 792.44828993586 45.455 2 -1.1065170578318897 0.3478556230613448 1.0 ['ENST00000393800.6_2_11:68382148-68382592:+|nuORF'] 99921 11140 SINDLERETQP True PC9_epitope_Rep1 1300.62590852928 1300.6248099358602 47.734 2 -1.1065482325701683 0.3478556230613448 1.0 ['UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion', 'ENSG00000197299|ENST00000355112|BLM', 'BLM|p.V1088Lfs*11|1|0.2|ENSG00000197299|chr15:90798237-90798238|-/TT|frameshift_variant'] 89154 7959 QVRDWSHYFKI True PC9_epitope_Rep2 1477.7466327986497 1477.74499490379 35.978 3 -1.1066287540857713 0.34789797487823637 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 85614 26119 QGKAGGPA True NCI_RA007_Epitope_Rep5 684.3554877829599 684.35493496793 108.05 1 -1.1066352977691494 0.34789797487823637 1.0 ['nc|ENSG00000173349|Q587I9|SFT2D3'] 91969 24589 RKPRNGIVV True PC9_epitope_Rep4 1037.6457965585698 1037.64468993586 103.07 2 -1.1066798166015672 0.34791914997244333 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 95535 16233 RWRRCRKCVWK True H1975_Epitope_Rep1 1575.85034418823 1575.8492499358601 67.789 2 -1.1067490013932284 0.34794032452385226 1.0 ['KCNF1|p.Q165R|1|0.18|ENSG00000162975|chr2:10912920-10912920|A/G|missense_variant'] 65983 10864 LSDYEQLR True PC9_epitope_Rep1 1022.5032742154599 1022.50216993586 46.675 2 -1.10679518017086 0.3479743152660113 1.0 ['ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'OTUD7A|p.A58S|1|0.28|ENSG00000169918|chr15:31570177-31570177|C/A|missense_variant'] 19516 23491 ELPKRRRQRG True PC9_epitope_Rep2 1294.7694339318998 1294.76832993586 95.829 2 -1.1070116605064395 0.348025017301925 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 14578 10039 DTVVIILEGVP True H1975_Epitope_Rep3 1153.65944050369 1153.65834993586 43.651 2 -1.1070216992038695 0.348025017301925 1.0 ['ENSG00000104154|ENST00000261867|SLC30A4'] 23775 20279 EYGSIIAFF True NCI_RA007_Epitope_Rep4 1045.51204799401 1045.5114749679299 87.773 1 -1.1070484539319096 0.348025017301925 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 101194 10386 SLHARTLS True NCI_RA007_Epitope_Rep5 883.48756458167 883.48701496793 46.577 1 -1.1071778975721147 0.3480846373691158 1.0 ['ENSG00000132823|ENST00000255174|OSER1'] 125440 17393 VITTLTTL True PC9_epitope_Rep5 860.5218844017201 860.52078993586 71.904 2 -1.107406379024943 0.34812697843109613 1.0 ['HTR1E|p.I128Lfs*14|1|0.13|ENSG00000168830|chr6:87015716-87015716|A/-|frameshift_variant', 'ENSG00000168830|ENST00000305344|HTR1E'] 108739 8228 SYRRTTFPV True PC9_epitope_Rep4 1125.59309227937 1125.59198993586 39.111 2 -1.1074114493690708 0.34812697843109613 1.0 ['nc|ENSG00000126838|P20742-2|PZP'] 59904 10271 LGGLILSHRL True NCI_RA007_Epitope_Rep1 1077.6658632968101 1077.66476993586 43.963 2 -1.1074806713515073 0.348160963731898 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6'] 23345 8017 EVRHTPVL True PC9_epitope_Rep4 949.53451477409 949.53340993586 38.287 2 -1.107542184173841 0.34816931732260253 1.0 ['ENST00000262544.6_1_20:18488293-18488443:+|nuORF'] 85616 24563 QGKAGGPA True PC9_epitope_Rep6 684.3554877829599 684.35493496793 108.8 1 -1.1075906832181834 0.34817320877064833 1.0 ['nc|ENSG00000173349|Q587I9|SFT2D3'] 79387 5596 PASPATAAP True PC9_epitope_Rep4 781.39701824177 781.39592993586 28.31 2 -1.1076046525956915 0.34817320877064833 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 76234 8766 NPDEVVVPLD True H1975_Epitope_Rep3 1095.54480467427 1095.54370993586 38.725 2 -1.107629767773432 0.34818991478182865 1.0 ['nc|ENSG00000111199|Q9HBA0-6|TRPV4', 'nc|ENSG00000111199|Q9HBA0-2|TRPV4', 'nc|ENSG00000111199|Q9HBA0-4|TRPV4', 'nc|ENSG00000111199|Q9HBA0-5|TRPV4', 'ENSG00000111199|ENST00000261740|TRPV4'] 33703 13892 GLHGELVSL True PC9_epitope_Rep6 923.50763131991 923.50652993586 65.273 2 -1.1076932436003784 0.34818991478182865 1.0 ['COL1A2|p.F579Lfs*103|1|0.18|ENSG00000164692|chr7:94415241-94415241|T/-|frameshift_variant'] 67017 17415 LSPPLGPSPGF True PC9_epitope_Rep4 1067.56514619603 1067.56404993586 74.98 2 -1.1077082040627946 0.34819380550251805 1.0 ['ENST00000303562.8_1_14:75745620-75745674:+|nuORF'] 101657 12788 SLLTLQGPV True PC9_epitope_Rep1 926.5436824754598 926.54258993586 54.064 2 -1.1077157884936313 0.34819380550251805 1.0 ['nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'LILRB3|p.G292Afs*25|1|0.25|ENSG00000204577|chr19:54221163-54221163|C/-|frameshift_variant', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3', 'ENST00000391735.3_19:54722514-54745001:-|nuORF', 'nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 17209 5048 EGTYTSHWRLS True NCI_RA007_Epitope_Rep2 1335.62076357919 1335.6196699358602 24.259 2 -1.1078573695301739 0.34822778646300523 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 46270 19645 ISPFSISSAMA True PC9_epitope_Rep5 1109.54269649929 1109.5415899358602 80.619 2 -1.1079043109531013 0.3482489524468535 1.0 ['ENSG00000021355|ENST00000380739|SERPINB1'] 141225 13959 YTATSLSHSN True PC9_epitope_Rep6 1079.48835242731 1079.48724993586 65.548 2 -1.1079751209820716 0.3482784690098794 1.0 ['ENSG00000164588|ENST00000303230|HCN1'] 117552 10113 TVSGQVSGVA True PC9_epitope_Rep4 903.4661604307499 903.46506993586 46.57 2 -1.1079789444241006 0.3482784690098794 1.0 ['ENST00000542605.1_1_12:6788557-6798678:-|nuORF'] 58268 14676 LELRKNHL True PC9_epitope_Rep2 1021.6032630402501 1021.60216993586 61.716 2 -1.1080187669102588 0.34828681991748034 1.0 ['ENST00000524575.5_2_11:101983367-101983394:+|nuORF'] 37218 13555 GVREVFEMATR True PC9_epitope_Rep3 1293.6499555324897 1293.64831490379 57.194 3 -1.1080930160011058 0.3483035210906668 1.0 ['ENST00000473074.1_1_1:113244164-113245337:-|nuORF', 'ENSG00000155366|ENST00000339083|RHOC', 'ENSG00000067560|ENST00000418115|RHOA'] 99678 10440 SIGRLIGI True PC9_epitope_Rep4 827.5228874612299 827.5217899358599 47.869 2 -1.1080938647855634 0.3483035210906668 1.0 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2'] 85546 7290 QGEDLAHVQH True PC9_epitope_Rep2 1132.52613491836 1132.5250299358602 33.427 2 -1.1081536593671348 0.3483369208692087 1.0 ['ENSG00000171729|ENST00000376008|TMEM51'] 68377 16649 LTEQRYTV True PC9_epitope_Rep3 1008.5240096600398 1008.52290993586 69.177 2 -1.1082070460960276 0.3483369208692087 1.0 ['ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 10384 3273 CGMWLGVI True PC9_epitope_Rep1 877.4190166396498 877.41790993586 17.491 2 -1.108244279814989 0.3483369208692087 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 138882 13793 YKFTKESRH True PC9_epitope_Rep6 1194.61455599994 1194.6129149037902 64.854 3 -1.1082462518041043 0.3483369208692087 1.0 ['nc|ENSG00000163075|Q4G0U5-2|CFAP221', 'ENSG00000163075|ENST00000413369|CFAP221'] 41848 12393 IAWEPVQYFN True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 55.475 3 -1.1082665332323665 0.34835808274289226 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 25749 5037 FESYPELQD True H1975_Epitope_Rep2 1126.4818700645399 1126.48021490379 24.457 3 -1.108305569706844 0.34836643177450355 1.0 ['ENST00000593818.5_3_19:50167869-50168989:-|nuORF'] 23547 13348 EVWFYDGKYHL True PC9_epitope_Rep5 1455.68230120659 1455.6806549037901 56.358 3 -1.1084387001152447 0.3483747805921769 1.0 ['ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 34016 7739 GLTTAKMPSVP True NCI_RA007_Epitope_Rep1 1100.58998104488 1100.5888899358602 34.096 2 -1.1084685204082558 0.34838255076548585 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'PTPRC|p.W489*|1|0.16|ENSG00000081237|chr1:198718109-198718109|G/-|frameshift_variant', 'PTPRC|p.S102Yfs*65|1|0.1|ENSG00000081237|chr1:198699570-198699570|C/-|frameshift_variant'] 113197 6857 TLQDSRTNTAY True NCI_RA007_Epitope_Rep3 1268.59969378144 1268.5985899358602 34.083 2 -1.108499110346311 0.34838255076548585 1.0 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2'] 16265 5960 EEEYPLMIMRK True H1975_Epitope_Rep2 1437.6996081468499 1437.69850993586 27.907 2 -1.1085248535574574 0.34838255076548585 1.0 ['ENST00000489282.1_1_1:59158492-59165724:-|nuORF'] 120811 10844 VELKPHDVR True PC9_epitope_Rep6 1091.60874234351 1091.60764993586 52.571 2 -1.1085442674172765 0.34838255076548585 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 60223 21231 LGPTTFRLSI True PC9_epitope_Rep3 1103.63389446219 1103.63278993586 86.956 2 -1.108587886176816 0.3484165214717639 1.0 ['ENSG00000134256|ENST00000682167|CD101'] 83913 13627 PVQATPHPF True PC9_epitope_Rep2 992.5079656730799 992.50686993586 57.708 2 -1.1086630534789432 0.34844156343278804 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 112146 10389 TIYRTAYRR True H1975_Epitope_Rep1 1198.65708951826 1198.6559899358601 44.91 2 -1.108688564477962 0.34844156343278804 1.0 ['ENSG00000172889|ENST00000308874|EGFL7'] 109278 15280 TAVDTAVYYC True PC9_epitope_Rep4 1104.47976188956 1104.4786699358601 66.703 2 -1.1086968461920452 0.34844156343278804 1.0 ['nc|ENSG00000211952|A0A0C4DH34|IGHV4-28'] 74288 11482 NEKRLEEQN True NCI_RA007_Epitope_Rep1 1158.5629143498998 1158.56180993586 48.628 2 -1.1088258620222964 0.3484755316423264 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'ENST00000506603.5_1_5:79034050-79057839:+|nuORF'] 10398 4130 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 20.961 2 -1.1089228081631899 0.34851784479003867 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 22564 7637 ETKKRRDFYE True NCI_RA007_Epitope_Rep5 1370.69426287262 1370.6931699358602 36.08 2 -1.1089298150265945 0.34851784479003867 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF', 'nc|ENSG00000113391|Q8WUF8-4|ARB2A', 'nc|ENSG00000113391|Q8WUF8-3|ARB2A', 'ENSG00000113391|ENST00000395965|FAM172A'] 113780 20469 TMRPYIQEQ True NCI_RA007_Epitope_Rep5 1164.5597435457598 1164.55810490379 85.677 3 -1.1089617411200705 0.34853900055083714 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 44621 23998 ILRLDLAWRDL True NCI_RA007_Epitope_Rep1 1382.8034193987799 1382.8023299358601 99.327 2 -1.1089836466818521 0.34855064109954015 1.0 ['ACTBL2|p.G183W|1|0.17|ENSG00000169067|chr5:57482161-57482161|C/A|missense_variant'] 120885 7914 VENGLQQL True H1975_Epitope_Rep3 899.4712458111899 899.47014993586 35.412 2 -1.1089848651004033 0.34855064109954015 1.0 ['CON__ENSEMBL:ENSBTAP00000024146'] 27047 21575 FLFDLAVIVC True PC9_epitope_Rep3 1138.6096538602999 1138.60854993586 88.283 2 -1.1090184535630463 0.34855064109954015 1.0 ['nc|ENSG00000134215|Q9UKW4-2|VAV3', 'ENST00000343258.8_1_1:108115955-108328118:-|nuORF', 'ENSG00000134215|ENST00000370056|VAV3', 'nc|ENSG00000134215|Q9UKW4-4|VAV3'] 19668 10824 ELREMIQLPG True PC9_epitope_Rep2 1184.6223438023198 1184.62124993586 46.953 2 -1.1090247804860722 0.34855064109954015 1.0 ['nc|ENSG00000161513|P22570-4|FDXR', 'nc|ENSG00000161513|P22570-6|FDXR', 'nc|ENSG00000161513|P22570-5|FDXR', 'ENST00000577509.5_1_17:72858941-72868963:-|nuORF', 'nc|ENSG00000161513|P22570|FDXR', 'ENSG00000161513|ENST00000293195|FDXR', 'nc|ENSG00000161513|P22570-2|FDXR', 'nc|ENSG00000161513|P22570-7|FDXR', 'nc|ENSG00000161513|P22570-3|FDXR', 'ENST00000579482.5_1_17:72859347-72866165:-|nuORF'] 65133 10330 LQNRRLFQSLH True H1975_Epitope_Rep1 1410.7844152896998 1410.7833099358602 44.682 2 -1.1090312763089027 0.34855064109954015 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 96291 14069 RYRDYYRQYNR True H1975_Epitope_Rep1 1651.7967708785498 1651.7956699358601 59.282 2 -1.1090322333936333 0.34855064109954015 1.0 ['ENSG00000214753|ENST00000301785|HNRNPUL2'] 124708 2550 VGYWLSEKK True PC9_epitope_Rep6 1108.59169529704 1108.5905899358602 14.737 2 -1.109046196956079 0.34856286504764833 1.0 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1', 'ENST00000555495.5_1_14:93483145-93581508:-|nuORF'] 80677 8598 PGVAAKVLAA True PC9_epitope_Rep1 895.5491022090699 895.54800993586 37.908 2 -1.109072150359219 0.34856286504764833 1.0 ['ENSG00000142409|ENST00000610935|ZNF787'] 63320 17007 LLSWKTSRATG True H1975_Epitope_Rep3 1218.67207087606 1218.67096993586 71.012 2 -1.1090744993367516 0.34856286504764833 1.0 ['ENSG00000213906|ENST00000533293|LTB4R2'] 916 7052 ADLTGIKW True H1975_Epitope_Rep3 902.48616759934 902.48506993586 32.09 2 -1.1090867180509134 0.3485712089967082 1.0 ['ENSG00000108510|ENST00000397786|MED13', 'MED13|p.P368Qfs*10|1|0.24|ENSG00000108510|chr17:62029921-62029922|GT/-|frameshift_variant'] 135762 3580 WMCLAAAL True PC9_epitope_Rep4 877.4190166396498 877.41790993586 19.866 2 -1.1091233814121844 0.34860516945462 1.0 ['ENST00000524501.1_1_11:89867926-89868807:+|nuORF', 'NAALAD2|p.N202Ifs*8|1|0.56|ENSG00000077616|chr11:90150601-90150601|A/-|frameshift_variant', 'nc|ENSG00000077616|Q9Y3Q0-2|NAALAD2', 'ENSG00000077616|ENST00000534061|NAALAD2'] 126748 25306 VLPGKKKKKT True NCI_RA007_Epitope_Rep5 1125.75976368165 1125.75811490379 104.87 3 -1.1091753067514751 0.34861351264809476 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 33748 10184 GLKEEKGLP True PC9_epitope_Rep5 969.5494961318898 969.54838993586 44.16 2 -1.1092769879875946 0.3486346636610482 1.0 ['ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 133325 837 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 4.4352 2 -1.1093036700788017 0.34865076010809287 1.0 ['ENSG00000169340|ENST00000302451|PDILT'] 128876 13209 VQELAEQLYK True H1975_Epitope_Rep3 1219.64485306871 1219.6437499358601 56.062 2 -1.1093165566629601 0.34865076010809287 1.0 ['SBF1|p.R777Vfs*41|1|0.13|ENSG00000100241|chr22:50462257-50462272|GCTCCCGAAGTAGGCG/-|frameshift_variant', 'nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 76238 4918 NPEERIQIEN True NCI_RA007_Epitope_Rep2 1240.6047791618796 1240.60312490379 23.75 3 -1.1093633007445212 0.34865076010809287 1.0 ['ENSG00000134115|ENST00000446702|CNTN6'] 40997 20063 HTFAACAVVSL True PC9_epitope_Rep1 1117.55901526977 1117.5579099358602 81.998 2 -1.1093645665293648 0.34865076010809287 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 112641 14620 TLFFKWLYPP True PC9_epitope_Rep2 1310.7063311264599 1310.7052299358602 61.504 2 -1.109372329965848 0.34865076010809287 1.0 ['ENST00000405837.5_1_11:62474765-62476674:-|nuORF'] 66065 10117 LSEHRHKLLQE True NCI_RA007_Epitope_Rep1 1388.75244645508 1388.7513499358602 43.363 2 -1.1094589578683378 0.3486719090187239 1.0 ['ENSG00000226650|ENST00000435029|KIF4B'] 83453 23612 PTPLLQEAWPP True H1975_Epitope_Rep1 1247.65502382959 1247.6533649037901 98.058 3 -1.1094745277077074 0.3486802505026702 1.0 ['ENST00000430334.7_1_17:43514711-43515125:-|nuORF'] 41014 19452 HTGKRRPRR True H1975_Epitope_Rep1 1162.6907896883797 1162.68968993586 81.011 2 -1.109539750598766 0.3486817675454883 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80'] 79391 24283 PASRGSYHLD True PC9_epitope_Rep1 1101.52032126193 1101.5197749679298 98.229 1 -1.1096479745896677 0.3486817675454883 1.0 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 120515 6844 VEFILSFIDHI True NCI_RA007_Epitope_Rep2 1331.7125387057101 1331.7114499358602 31.239 2 -1.1096551682160372 0.3486817675454883 1.0 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 12991 10856 DLLVEQNK True H1975_Epitope_Rep1 957.51311062317 957.51200993586 46.717 2 -1.1096929183985333 0.3486817675454883 1.0 ['CMYA5|p.K1822N|1|0.23|ENSG00000164309|chr5:79734231-79734231|A/T|missense_variant'] 56962 9094 LDQVLLRCLEH True H1975_Epitope_Rep1 1337.71255578905 1337.7114499358602 39.884 2 -1.10975594761089 0.3486817675454883 1.0 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'FPGS|p.H505Tfs*62|1|0.26|ENSG00000136877|chr9:127813350-127813350|C/-|frameshift_variant', 'ENST00000467826.5_1_9:130570554-130576503:+|nuORF'] 64624 7373 LPTEDLREGRW True NCI_RA007_Epitope_Rep3 1370.6942628726197 1370.6931699358602 36.129 2 -1.1097591648822884 0.3486817675454883 1.0 ['ENST00000216968.4_1_20:33764702-33764822:+|nuORF'] 3590 12886 AGNINFKWDP True PC9_epitope_Rep3 1160.56145779792 1160.56036993586 54.582 2 -1.1097977119507607 0.3486817675454883 1.0 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1'] 31298 22722 GDIVMTQSPL True PC9_epitope_Rep5 1059.52704643515 1059.5259499358601 92.404 2 -1.1098085588817188 0.3486817675454883 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 106868 11000 SVCLSIISML True PC9_epitope_Rep5 1064.56098941572 1064.5598899358602 47.299 2 -1.1098349114829136 0.3486817675454883 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF', 'ENST00000519277.5_1_8:74708911-74722861:-|nuORF', 'ENST00000519255.2_1_8:74708126-74722861:-|nuORF', 'ENSG00000104343|ENST00000602593|UBE2W', 'nc|ENSG00000104343|Q96B02-2|UBE2W', 'nc|ENSG00000104343|Q96B02-3|UBE2W'] 55276 6898 LADREDSLPK True H1975_Epitope_Rep1 1142.59315184902 1142.5920499358601 31.573 2 -1.1098461969908977 0.3486817675454883 1.0 ['ENSG00000141371|ENST00000269127|CHCT1'] 10679 23194 CQLPKVDLVAQ True PC9_epitope_Rep6 1212.6536439305999 1212.6520049037902 102.31 3 -1.109883746896189 0.3486817675454883 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 31299 6646 GDIVTGVYTG True PC9_epitope_Rep3 980.48147614172 980.48036993586 30.587 2 -1.109890416305943 0.3486817675454883 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 102684 11313 SLYQCRHDFRY True H1975_Epitope_Rep1 1486.67756726266 1486.67646993586 48.493 2 -1.1098955270316837 0.3486817675454883 1.0 ['ENST00000286298.4_1_5:149365201-149365333:+|nuORF'] 129765 23365 VRRARRRASP True PC9_epitope_Rep1 1223.7435535372297 1223.7418949037901 94.656 3 -1.1098998541980052 0.3486817675454883 1.0 ['ENST00000287169.7_1_11:57435394-57435445:+|nuORF'] 74703 13171 NGTELPPPP True H1975_Epitope_Rep2 920.4603467743199 920.4597949679301 55.788 1 -1.1099248313951 0.34868564258185125 1.0 ['CLCA2|p.A725Sfs*9|1|0.16|ENSG00000137975|chr1:86453386-86453387|GC/-|frameshift_variant', 'ENSG00000137975|ENST00000370565|CLCA2', 'CLCA2|p.D389Tfs*18|1|0.22|ENSG00000137975|chr1:86439068-86439068|G/-|frameshift_variant', 'CLCA2|p.G706Rfs*15|1|0.09|ENSG00000137975|chr1:86450692-86450693|-/A|frameshift_variant'] 82155 23607 PNLALVLLGAL True PC9_epitope_Rep2 1092.69068106232 1092.68958993586 96.275 2 -1.1099495716728245 0.34868564258185125 1.0 ['nc|ENSG00000184224|Q8NBR9|NDUFV1-DT'] 76108 1859 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 10.214 3 -1.1100153011941964 0.3487023213531197 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 135629 12030 WLLEEEQVWEK True H1975_Epitope_Rep3 1487.7296453218298 1487.7285499358602 51.434 2 -1.1100154462813445 0.3487023213531197 1.0 ['ENST00000265371.8_1_10:33623524-33623671:-|nuORF'] 59709 22071 LGAWWPLG True PC9_epitope_Rep2 898.4701236123799 898.46902993586 90.369 2 -1.1100583362995828 0.3487106604184272 1.0 ['ENST00000553208.5_1_12:58087944-58109621:+|nuORF'] 38645 18147 HFLFRFVLFK True NCI_RA007_Epitope_Rep5 1352.7757480989596 1352.77464993586 76.609 2 -1.1100674208403083 0.3487273379084298 1.0 ['ENST00000409371.7_1_4:6202075-6202225:-|nuORF'] 120588 7671 VEHEAVAE True H1975_Epitope_Rep3 882.4083112014598 882.40720993586 34.489 2 -1.1100942801975837 0.3487273379084298 1.0 ['ENST00000481284.5_1_20:33462930-33515014:+|nuORF', 'ENSG00000131069|ENST00000360596|ACSS2', 'nc|ENSG00000131069|Q9NR19-2|ACSS2', 'ACSS2|p.L588P|1|0.08|ENSG00000131069|chr20:34926141-34926141|T/C|missense_variant'] 65142 15370 LQNRRLFQSLH True PC9_epitope_Rep2 1410.7844152896998 1410.7833099358602 64.403 2 -1.110135383303687 0.34874847961078037 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 63919 11303 LNQTIDIC[Carbamidomethyl]KH True NCI_RA007_Epitope_Rep1 1240.6234067109099 1240.6223099358601 47.944 2 -1.1101594533507986 0.34875681765805444 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.R1054Pfs*53|1|0.12|ENSG00000138829|chr5:128345413-128345413|C/-|frameshift_variant', 'FBN2|p.D1008Mfs*99|1|0.14|ENSG00000138829|chr5:128345552-128345552|C/-|frameshift_variant'] 43760 23346 IHKLMRWIR True PC9_epitope_Rep4 1251.73865139759 1251.7375499358602 98.058 2 -1.1101749376379169 0.3487651554918253 1.0 ['ENSG00000164077|ENST00000296473|MON1A', 'nc|ENSG00000164077|Q86VX9|MON1A', 'ENST00000486107.5_1_3:49946449-49946602:-|nuORF', 'nc|ENSG00000164077|Q86VX9-2|MON1A', 'nc|ENSG00000164077|Q86VX9-4|MON1A'] 63940 11334 LNSHCMDHT True H1975_Epitope_Rep1 1056.41169941308 1056.41060993586 48.575 2 -1.1102260710039513 0.3487818305188903 1.0 ['ENSG00000186026|ENST00000421176|ZNF284'] 22157 11255 ESSKFYLCWK True H1975_Epitope_Rep3 1289.6114447654497 1289.61034993586 48.396 2 -1.1102280057787492 0.3487818305188903 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2'] 37096 9911 GVPRPVLDP True PC9_epitope_Rep6 948.5392658013599 948.53816993586 48.632 2 -1.1103757262693241 0.3488797849187044 1.0 ['ENST00000355552.7_2_3:127298967-127309369:-|nuORF', 'ENST00000469111.5_2_3:127306961-127309402:-|nuORF'] 135066 4968 WEALGNTL True PC9_epitope_Rep1 902.44978209062 902.44868993586 23.969 2 -1.110387715200293 0.34888365424006557 1.0 ['nc|ENSG00000162739|Q96DU3-3|SLAMF6', 'nc|ENSG00000162739|Q96DU3-2|SLAMF6', 'ENSG00000162739|ENST00000368057|SLAMF6', 'SLAMF6|p.S174L|1|0.34|ENSG00000162739|chr1:160491250-160491250|G/A|missense_variant'] 85324 8795 QESFALHSS True NCI_RA007_Epitope_Rep5 1004.45632402304 1004.45522993586 40.496 2 -1.1103912071700708 0.34888365424006557 1.0 ['nc|ENSG00000158352|Q9ULL8-2|SHROOM4', 'ENSG00000158352|ENST00000376020|SHROOM4'] 80335 19797 PGGGGYGG True PC9_epitope_Rep4 620.2554393885199 620.25489496793 84.275 1 -1.1104260032958295 0.34889198980963476 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4'] 98286 8680 SEVNFKEL True NCI_RA007_Epitope_Rep4 964.48656152216 964.48546993586 40.175 2 -1.110514933936726 0.3489381312646415 1.0 ['ENSG00000152939|ENST00000325631|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-3|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-2|MARVELD2'] 116900 22453 TVFKVRMMAGF True PC9_epitope_Rep5 1285.6675201729297 1285.6664299358602 91.366 2 -1.1105227303645724 0.3489381312646415 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3'] 102332 5049 SLSSLREQ True NCI_RA007_Epitope_Rep3 918.4770594676199 918.47596993586 26.855 2 -1.1105367964684723 0.3489381312646415 1.0 ['ENSG00000185052|ENST00000328041|SLC24A3'] 125091 17355 VIEKHVFVVE True NCI_RA007_Epitope_Rep5 1197.6757592741699 1197.67411490379 73.535 3 -1.1105830594533792 0.3489381312646415 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 103815 21284 SPWPSQAG True H1975_Epitope_Rep2 828.37661715036 828.37552993586 88.08 2 -1.1106294016394056 0.3489592667503008 1.0 ['ENSG00000136378|ENST00000388820|ADAMTS7'] 12853 6982 DLGWATPSPP True H1975_Epitope_Rep3 1039.4974605590298 1039.49636993586 31.819 2 -1.1106933628386837 0.3489759344598054 1.0 ['ENST00000445369.2_1_16:3063604-3064486:+|nuORF'] 50121 10510 KKKKHKHR True NCI_RA007_Epitope_Rep2 1088.7043144942 1088.70320993586 45.477 2 -1.110701510228453 0.3489759344598054 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'PRPF4B|p.S309Pfs*63|1|0.26|ENSG00000112739|chr6:4032440-4032440|G/-|frameshift_variant'] 69308 12086 LTVEDHYYE True H1975_Epitope_Rep3 1167.5084191655499 1167.50732993586 51.654 2 -1.1107144224393737 0.34897980082435165 1.0 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53260493-53260973:-|nuORF'] 3231 13316 AGERPYKCI True PC9_epitope_Rep5 1035.5171504577897 1035.51604993586 56.232 2 -1.1107467612208095 0.34897980082435165 1.0 ['PLAG1|p.T57A|1|0.57|ENSG00000181690|chr8:56168101-56168101|T/C|missense_variant'] 60778 25539 LHSKLISGG True PC9_epitope_Rep1 910.52361573722 910.52250993586 103.24 2 -1.1107795416547044 0.34900093442392127 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 76116 743 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 4.1164 3 -1.110831181394631 0.34902026032534267 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 32074 7585 GESIYYDEQSK True NCI_RA007_Epitope_Rep2 1317.57247597409 1317.57136993586 34.127 2 -1.1108688634502932 0.34902026032534267 1.0 ['ENSG00000182963|ENST00000592524|GJC1'] 60781 25587 LHSKLISGG True PC9_epitope_Rep3 910.52361573722 910.52250993586 103.91 2 -1.110881732844828 0.34902026032534267 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 138481 16954 YHRRVHTG True NCI_RA007_Epitope_Rep3 1024.5314950823197 1024.53038993586 74.551 2 -1.1108876011355313 0.34902026032534267 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 58154 14265 LEKRIEDL True PC9_epitope_Rep1 1014.5709598524599 1014.56986993586 59.694 2 -1.110888160867415 0.34902026032534267 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'nc|ENSG00000157741|Q6ZU65-2|UBN2'] 85115 6406 QELLKDRDP True H1975_Epitope_Rep2 1112.5825871653199 1112.5814899358602 29.564 2 -1.1109038629854282 0.34902026032534267 1.0 ['ENST00000550627.5_1_19:15793132-15807110:+|nuORF', 'ENST00000518629.7_2_19:15791179-15807110:+|nuORF', 'ENSG00000186204|ENST00000550308|CYP4F12'] 18011 10532 EIEATLERL True H1975_Epitope_Rep2 1072.57643915572 1072.57534993586 45.533 2 -1.1109217758007155 0.34902026032534267 1.0 ['nc|ENSG00000091436|Q9NYL2-2|MAP3K20', 'ENSG00000091436|ENST00000375213|MAP3K20'] 60786 23566 LHSKLISGG True PC9_epitope_Rep6 910.52361573722 910.52250993586 103.79 2 -1.110949058153858 0.34902026032534267 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 14248 12795 DSLVIEYNRVN True PC9_epitope_Rep1 1320.6673794184399 1320.66628993586 54.09 2 -1.1109704015017028 0.34902026032534267 1.0 ['ENST00000461464.1_1_4:57576495-57576777:+|nuORF'] 60773 24918 LHSKLISGG True H1975_Epitope_Rep3 910.52361573722 910.52250993586 103.65 2 -1.1109811371861134 0.34902026032534267 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 130482 4352 VSPPTHGR True NCI_RA007_Epitope_Rep5 849.44569976969 849.44460993586 23.351 2 -1.1110377563903744 0.34903692327382096 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 126853 8044 VLQAREERPLL True H1975_Epitope_Rep3 1322.7670338900598 1322.7659299358602 35.914 2 -1.1110511451487897 0.34903692327382096 1.0 ['ENST00000269300.8_1_17:8784037-8784088:-|nuORF'] 64847 8208 LQDPLWMFLHL True H1975_Epitope_Rep3 1411.73222860447 1411.73112993586 36.554 2 -1.111074125909148 0.3490452544281765 1.0 ['ENST00000455833.6_2_1:19230994-19231414:-|nuORF'] 89599 7780 QYPLQGVEVQP True H1975_Epitope_Rep3 1256.6401020414398 1256.63900993586 34.91 2 -1.1110839921558597 0.3490663834035092 1.0 ['nc|ENSG00000135454|Q00973-2|B4GALNT1', 'B4GALNT1|p.F523Sfs*8|1|0.27|ENSG00000135454|chr12:57626780-57626780|G/-|frameshift_variant', 'ENSG00000135454|ENST00000341156|B4GALNT1', 'nc|ENSG00000135454|Q00973-3|B4GALNT1', 'ENST00000553142.5_1_12:58021700-58025915:-|nuORF'] 44400 13837 ILFWQFIVWV True PC9_epitope_Rep4 1349.7536156720498 1349.75197490379 61.123 3 -1.111131905247238 0.34908304431845816 1.0 ['CHRM2|p.G167W|2|0.31|ENSG00000181072|chr7:137015364-137015364|G/T|missense_variant'] 41885 8929 ICLEEEVLP True PC9_epitope_Rep5 1043.5208984255498 1043.5198099358602 39.29 2 -1.1111409648903445 0.34908304431845816 1.0 ['ENSG00000184575|ENST00000332707|XPOT'] 62754 4893 LLLPLLLR True NCI_RA007_Epitope_Rep1 949.66882341893 949.6682749679301 23.113 1 -1.1111450086244108 0.3490869070014461 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'ENSG00000175489|ENST00000339007|LRRC25'] 113940 9443 TPAAFAGK True PC9_epitope_Rep2 761.40718900265 761.40608993586 41.663 2 -1.1111686707495478 0.3490869070014461 1.0 ['RSAD2|p.D213Ifs*8|1|0.6|ENSG00000134321|chr2:6887061-6887061|G/-|frameshift_variant', 'ENSG00000134321|ENST00000382040|RSAD2'] 68722 15580 LTKRPRYLV True PC9_epitope_Rep2 1144.70806246196 1144.7069699358601 65.202 2 -1.1111840540478997 0.34909076948671025 1.0 ['ENST00000549469.1_1_2:176973927-176983694:+|nuORF'] 128001 13130 VPIFTEEF True PC9_epitope_Rep1 980.4854988929999 980.48440993586 55.372 2 -1.1111907767900278 0.34909076948671025 1.0 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'nc|ENSG00000064961|Q9P0W2-2|HMG20B'] 118049 19285 TYFHRKSQEDF True PC9_epitope_Rep3 1456.6735274280397 1456.67242993586 79.402 2 -1.1112398512506871 0.34913748976248976 1.0 ['ENSG00000143476|ENST00000366991|DTL'] 24552 20875 FAGKVKYQIK True PC9_epitope_Rep1 1180.6968290719199 1180.69572993586 85.12 2 -1.1113616386280762 0.34915414736518824 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 126756 26582 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 107.98 3 -1.111385920236173 0.34915414736518824 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 36578 11370 GVHGACVL True NCI_RA007_Epitope_Rep5 754.37959435582 754.37848993586 50.385 2 -1.1115223272363792 0.34920086503640574 1.0 ['ENST00000570989.1_1_17:48141869-48142148:+|nuORF', 'ENST00000508100.1_1_17:48133863-48142148:+|nuORF'] 81337 13853 PLARQVLG True PC9_epitope_Rep3 852.5181364339599 852.51702993586 58.366 2 -1.1115379344796905 0.34920919281363566 1.0 ['ENST00000508139.1_1_5:176518793-176520368:+|nuORF'] 23209 18397 EVLTDSLRRLW True NCI_RA007_Epitope_Rep1 1386.7619485096197 1386.76030490379 75.696 3 -1.1116641885607934 0.34923031644678754 1.0 ['ENST00000298569.8_1_5:175773868-175773925:-|nuORF'] 102290 20275 SLSLSVKINKT True PC9_epitope_Rep3 1188.70778767844 1188.7061549037899 83.244 3 -1.1118187344515236 0.34930262316058863 1.0 ['ENST00000313949.11_1_20:57486041-57486158:+|nuORF'] 12953 12147 DLLEPFIAVS True NCI_RA007_Epitope_Rep1 1102.5910265906998 1102.58992993586 51.223 2 -1.111853482051096 0.3493141921285634 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 84228 19283 PYLLGRVR True PC9_epitope_Rep5 972.58688470012 972.58578993586 79.216 2 -1.1119116003508926 0.3493141921285634 1.0 ['ENST00000457458.6_1_X:47089093-47089270:+|nuORF'] 49782 7683 KHEENEAKLT True H1975_Epitope_Rep1 1197.5989655054498 1197.5978699358602 34.518 2 -1.1119397069662178 0.3493141921285634 1.0 ['ENSG00000102189|ENST00000322349|EEA1'] 20134 17759 ENAKILTRG True NCI_RA007_Epitope_Rep4 1000.5665431783599 1000.56544993586 76.876 2 -1.111943440841438 0.3493141921285634 1.0 ['ENST00000474140.1_1_1:3809311-3816771:-|nuORF'] 117660 8459 TVTRHDKRKLE True PC9_epitope_Rep3 1381.77899555609 1381.77736490379 37.5 3 -1.11197439444531 0.3493141921285634 1.0 ['ENSG00000183035|ENST00000329312|CYLC1'] 127784 9559 VPDREFFDP True H1975_Epitope_Rep3 1120.5189242795998 1120.5178299358602 41.778 2 -1.111976612289382 0.3493141921285634 1.0 ['ENST00000555259.5_1_14:31112578-31185169:+|nuORF'] 131593 25646 VTLKTIKK True NCI_RA007_Epitope_Rep5 929.62735252977 929.62624993586 106.19 2 -1.1121201083455692 0.34933531225609993 1.0 ['ENSG00000186462|ENST00000373517|NAP1L2', 'nc|ENSG00000186462|Q9ULW6-2|NAP1L2', 'NAP1L2|p.K339N|1|0.22|ENSG00000186462|chrX:73213476-73213476|C/A|missense_variant', 'nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1'] 63939 6231 LNSGSLRVPG True H1975_Epitope_Rep3 998.5508931142199 998.54978993586 28.981 2 -1.1121689533912646 0.34938140504855364 1.0 ['ENST00000397863.5_1_18:74728433-74728619:-|nuORF'] 77796 19034 NTVECYYPK True PC9_epitope_Rep5 1115.4957463068697 1115.49464993586 78.242 2 -1.1122340243055648 0.34938140504855364 1.0 ['KLHL1|p.N527Y|1|0.12|ENSG00000150361|chr13:69796798-69796798|T/A|missense_variant'] 45102 20060 IPLIERLQRN True NCI_RA007_Epitope_Rep1 1250.7459045226599 1250.74426490379 82.238 3 -1.1122582036205275 0.34938140504855364 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 69110 12714 LTRHLRDPFVK True H1975_Epitope_Rep1 1380.79900272468 1380.7979099358602 53.961 2 -1.1122585585846214 0.34938140504855364 1.0 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000486040.1_1_7:2278405-2281804:-|nuORF'] 116904 11217 TVFLSTWNK True NCI_RA007_Epitope_Rep5 1094.5760452329 1094.57494993586 49.782 2 -1.1122926933310784 0.34938525901001755 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF'] 30419 18545 GAEQLVEILN True PC9_epitope_Rep6 1084.5764391557198 1084.57534993586 83.974 2 -1.112305977092557 0.34938525901001755 1.0 ['ENSG00000143199|ENST00000367851|ADCY10', 'ADCY10|p.K574Mfs*11|1|0.04|ENSG00000143199|chr1:167860959-167860960|-/GACA|frameshift_variant'] 122001 16017 VFVFVFLF True PC9_epitope_Rep4 1016.5735260517598 1016.57242993586 69.542 2 -1.1123193798684177 0.3493935827235044 1.0 ['ENST00000521263.1_1_1:231005225-231005288:-|nuORF'] 128296 7111 VPPPHLGP True H1975_Epitope_Rep3 812.45447354824 812.45336993586 32.323 2 -1.1123225364866576 0.3494019062240133 1.0 ['ENST00000585457.5_1_17:42255025-42255136:-|nuORF'] 82306 16398 PPHTDSTL True PC9_epitope_Rep5 866.4133965819001 866.41228993586 68.074 2 -1.112402869876378 0.34947419594196966 1.0 ['ENST00000339511.9_1_3:9798606-9798831:+|nuORF'] 94629 4165 RRVPEVQLMVQ True NCI_RA007_Epitope_Rep2 1353.7550893073699 1353.75343490379 20.84 3 -1.1124970923845985 0.3495081044430514 1.0 ['CON__P01030'] 59110 5405 LEYLDLSHNK True NCI_RA007_Epitope_Rep5 1230.6244519772997 1230.6228149037902 27.478 3 -1.1125547284111896 0.34952921911779755 1.0 ['ENSG00000174125|ENST00000308979|TLR1'] 63240 14471 LLSKREDNV True PC9_epitope_Rep1 1072.58767254576 1072.58656993586 60.487 2 -1.1125836400358644 0.3495375404572145 1.0 ['ENST00000366960.7_1_1:213277810-213290668:+|nuORF'] 64334 20919 LPLDDGAAHV True PC9_epitope_Rep2 1006.5083595958998 1006.50726993586 85.911 2 -1.1127398621938034 0.34959703210950493 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121878388-121880774:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 18612 6458 EKSEFQRE True NCI_RA007_Epitope_Rep1 1051.4934378077498 1051.4923499358601 29.142 2 -1.1128000388817088 0.34961814483632037 1.0 ['ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 62894 9587 LLNLFHNQI True H1975_Epitope_Rep1 1110.61857875122 1110.61748993586 41.801 2 -1.112848021488218 0.34962646471882514 1.0 ['ENSG00000129988|ENST00000217407|LBP'] 23135 5075 EVKIRERQRAQ True NCI_RA007_Epitope_Rep1 1411.80079362983 1411.79914490379 23.825 3 -1.1128633196005144 0.34963478438847173 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2', 'ENST00000486886.1_1_3:111680917-111693407:+|nuORF'] 46293 19174 ISPYMHPTIPE True PC9_epitope_Rep2 1283.6220094491503 1283.62090993586 79.125 2 -1.1128995211555157 0.3496469504707327 1.0 ['ENSG00000141579|ENST00000269394|ZNF750'] 36181 22223 GVAVMKLFNKA True PC9_epitope_Rep5 1176.66890007192 1176.66780993586 90.486 2 -1.1129197560279125 0.3496469504707327 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 47435 18388 IVLSSEHGFL True H1975_Epitope_Rep3 1100.5866099166 1100.58550993586 77.084 2 -1.1129224896233707 0.3496469504707327 1.0 ['ENSG00000223638|ENST00000434937|RFPL4A'] 133556 10171 VWTKVEGV True NCI_RA007_Epitope_Rep3 916.5018176634799 916.50072993586 47.094 2 -1.1130721591203876 0.34972754483358487 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 95529 20480 RWRLPLTCLLL True NCI_RA007_Epitope_Rep5 1382.82204666838 1382.8204049037902 85.722 3 -1.1130876118713715 0.34972754483358487 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 77913 25511 NVIINIII True PC9_epitope_Rep1 910.5851533646199 910.58404993586 103.12 2 -1.1131346699929632 0.3497518673897473 1.0 ['L1MD2_dup3350|chr5:176309943-176310863:+|1.3301102545016334|0.265229905058228|2.33|541.0|52|2|anti-sense'] 46351 3232 ISREQMILWD True NCI_RA007_Epitope_Rep1 1289.6438075228898 1289.64217490379 16.466 3 -1.1131727585104625 0.3497518673897473 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B', 'PDE3B|p.P839Lfs*47|1|0.83|ENSG00000152270|chr11:14844019-14844019|C/-|frameshift_variant', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 91578 4182 RIKEMKQMHP True H1975_Epitope_Rep3 1296.6794818389599 1296.67783490379 21.205 3 -1.1131891656630528 0.3497518673897473 1.0 ['ENSG00000180071|ENST00000399703|ANKRD18A', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B'] 120807 14090 VELKPHDVR True PC9_epitope_Rep1 1091.60874234351 1091.60764993586 59.028 2 -1.1131922059731036 0.3497518673897473 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 77717 16185 NTLERREKHEK True PC9_epitope_Rep2 1438.7640737679396 1438.7629699358602 67.508 2 -1.1131965777207227 0.3497518673897473 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 117121 8827 TVKGKGCP True H1975_Epitope_Rep2 788.4214591677999 788.42036993586 38.919 2 -1.1132160074464323 0.3497518673897473 1.0 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509178.5_1_5:134117763-134126202:+|nuORF', 'ENST00000505592.5_1_5:134118651-134120263:+|nuORF'] 11320 6509 DELEFAKRFEL True H1975_Epitope_Rep1 1395.70343057399 1395.70232993586 30.097 2 -1.1132587826989382 0.3497557107410534 1.0 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1', 'ENST00000556894.1_1_14:59791074-59792827:+|nuORF'] 65146 16022 LQNRRLFQSLH True PC9_epitope_Rep5 1410.7844152896998 1410.7833099358602 66.618 2 -1.1132715256735057 0.3497557107410534 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 86622 7940 QLERVARIYKH True NCI_RA007_Epitope_Rep1 1411.80481638111 1411.80316490379 34.877 3 -1.1132913113658938 0.3497595538957385 1.0 ['ENSG00000178297|ENST00000696167|TMPRSS9', 'nc|ENSG00000178297|Q7Z410|TMPRSS9'] 16841 7682 EEYYGEQYSH True H1975_Epitope_Rep1 1303.4993110338298 1303.4982099358601 34.515 2 -1.1133213234707888 0.3497595538957385 1.0 ['nc|ENSG00000184402|O75177-2|SS18L1', 'ENSG00000184402|ENST00000331758|SS18L1', 'nc|ENSG00000184402|O75177-5|SS18L1', 'nc|ENSG00000184402|O75177-4|SS18L1', 'nc|ENSG00000184402|O75177-3|SS18L1'] 23365 12454 EVRNVFLE True PC9_epitope_Rep1 1004.5290950404799 1004.52798993586 52.77 2 -1.1133545886138994 0.3497678701607643 1.0 ['STK32B|p.R70L|1|0.27|ENSG00000152953|chr4:5168399-5168399|G/T|missense_variant'] 15748 5413 ECGKTFSSP True H1975_Epitope_Rep1 954.41168232974 954.41058993586 25.878 2 -1.1134350543421068 0.34978002864743196 1.0 ['nc|ENSG00000197857|P15621-2|ZNF44', 'ENSG00000197857|ENST00000355684|ZNF44', 'nc|ENSG00000197857|P15621-3|ZNF44', 'nc|ENSG00000197857|P15621|ZNF44'] 63825 10050 LNIYNFTYK True NCI_RA007_Epitope_Rep4 1174.60225998074 1174.60060490379 45.503 3 -1.113459600480766 0.34978002864743196 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 12691 12705 DLDSRVLYY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 53.97 2 -1.1135268614597442 0.34978002864743196 1.0 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 67080 21900 LSQELESLKV True PC9_epitope_Rep2 1144.63395403184 1144.6328499358601 89.714 2 -1.1135658007898181 0.3497883442251864 1.0 ['nc|ENSG00000168386|Q4L180-6|FILIP1L', 'nc|ENSG00000168386|Q4L180-5|FILIP1L', 'nc|ENSG00000168386|Q4L180-3|FILIP1L', 'nc|ENSG00000168386|Q4L180-7|FILIP1L', 'nc|ENSG00000168386|Q4L180-2|FILIP1L', 'nc|ENSG00000168386|Q4L180|FILIP1L', 'ENSG00000168386|ENST00000477258|FILIP1L'] 124091 6059 VGSMFQAEIPV True H1975_Epitope_Rep2 1176.58489566444 1176.58324490379 28.283 3 -1.113572166031075 0.34979539641943735 1.0 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'MIER1|p.K332Nfs*25|1|0.17|ENSG00000198160|chr1:66976643-66976643|A/-|frameshift_variant', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 88791 16958 QTSLEMFYS True PC9_epitope_Rep1 1104.47976188956 1104.4786699358601 70.052 2 -1.1135772323268278 0.34979539641943735 1.0 ['nc|ENSG00000136122|Q6PGQ7-2|BORA', 'ENSG00000136122|ENST00000390667|BORA'] 127254 11991 VLYLTPPP True PC9_epitope_Rep3 898.5164050984599 898.51530993586 51.15 2 -1.113650184786784 0.34979539641943735 1.0 ['ENST00000064778.8_1_11:73116189-73116408:-|nuORF'] 3143 17606 AGCWWGVM True NCI_RA007_Epitope_Rep5 908.3673154199599 908.36620993586 74.502 2 -1.1136648329896464 0.34979539641943735 1.0 ['ENSG00000144843|ENST00000357003|ADPRH', 'ENST00000471850.1_1_3:119298364-119306722:+|nuORF'] 32656 20756 GGPHEHPS True H1975_Epitope_Rep2 816.3514650316799 816.35036993586 85.949 2 -1.113686061407345 0.34979539641943735 1.0 ['ENST00000600019.5_1_19:50060962-50063200:-|nuORF', 'ENST00000599425.5_1_19:50060962-50063306:-|nuORF'] 73536 13208 MVPFIFVG True PC9_epitope_Rep4 908.4829967951998 908.48188993586 58.703 2 -1.1137227808255565 0.34979539641943735 1.0 ['ENSG00000129245|ENST00000250113|FXR2'] 10394 3384 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 18.089 2 -1.1137689916692173 0.34979539641943735 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 132136 22088 VTVFLVTG True PC9_epitope_Rep3 834.4851049701799 834.4845549679301 90.257 1 -1.1137800353813794 0.3497992378711542 1.0 ['ENSG00000153230|ENST00000283225|OR14K1'] 126977 19084 VLRQFRFDP True PC9_epitope_Rep1 1176.64037682496 1176.63926993586 78.197 2 -1.11378348151524 0.3497992378711542 1.0 ['nc|ENSG00000237541|P01909|HLA-DQA1'] 111736 6026 TIHERISEK True H1975_Epitope_Rep3 1111.5985715826298 1111.59746993586 28.194 2 -1.1138561217181153 0.3498203393731698 1.0 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 123521 17851 VGPLELEIK True H1975_Epitope_Rep1 996.5855472874399 996.58444993586 74.335 2 -1.1138901241661605 0.3498414403355327 1.0 ['ENSG00000141519|ENST00000397545|CCDC40', 'CCDC40|p.M808Ffs*10|1|0.08|ENSG00000141519|chr17:80086187-80086188|-/CTTCC|frameshift_variant', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'ENST00000572253.5_1_17:78055494-78060128:+|nuORF'] 67315 11003 LSSCIHKIEEV True H1975_Epitope_Rep3 1256.64347316972 1256.6423699358602 47.412 2 -1.1138963348277457 0.3498497538520555 1.0 ['ENSG00000198920|ENST00000361413|KIAA0753'] 127381 21152 VNDLRYYRLC True H1975_Epitope_Rep1 1313.65504091293 1313.65394993586 87.872 2 -1.1139633059013656 0.3498580671559727 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 22742 7456 ETTLVVYIMT True PC9_epitope_Rep2 1168.6049624026798 1168.60386993586 34.054 2 -1.1139789228568107 0.34986638024729244 1.0 ['ENSG00000119686|ENST00000238667|FLVCR2', 'nc|ENSG00000119686|Q9UPI3-2|FLVCR2'] 92392 9733 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 42.779 2 -1.1141472612836008 0.3499130523731588 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 124050 6884 VGSITETL True PC9_epitope_Rep6 818.43854870058 818.43744993586 35.381 2 -1.1141604501253475 0.34991689042321955 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 64508 10176 LPQVKPET True PC9_epitope_Rep1 910.5123823471799 910.51128993586 44.018 2 -1.114172716785658 0.34991689042321955 1.0 ['nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF'] 116049 13781 TSPEPPCP True H1975_Epitope_Rep2 826.3531048244599 826.35255496793 58.153 1 -1.11432371411071 0.34992520233726715 1.0 ['nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 10393 3298 CGMWLGVI True PC9_epitope_Rep5 877.4190166396498 877.41790993586 17.742 2 -1.114354515929869 0.3499290399294235 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 63095 21267 LLQQRLLL True PC9_epitope_Rep2 995.64915060351 995.64804993586 87.264 2 -1.1143619337171053 0.3499290399294235 1.0 ['ENST00000359486.7_2_22:42575622-42575670:-|nuORF', 'ENST00000204005.13_1_19:41129584-41129844:+|nuORF'] 29654 12763 FVKSITKISA True H1975_Epitope_Rep1 1092.6542955536 1092.6531899358602 54.153 2 -1.114415018668174 0.3499501368041527 1.0 ['MPDZ|p.S413I|1|0.21|ENSG00000107186|chr9:13216826-13216826|C/A|missense_variant'] 67334 14397 LSSERFSEYL True H1975_Epitope_Rep2 1229.5928174958499 1229.59172993586 60.527 2 -1.1144404331851265 0.349958447868056 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 22588 9884 ETLEGLSDDAF True H1975_Epitope_Rep1 1195.52446315251 1195.52336993586 42.952 2 -1.1145053351653484 0.3499667587194436 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 112228 20308 TKLRALKCRQ True PC9_epitope_Rep6 1215.72339525627 1215.72175490379 90.822 3 -1.114551314361481 0.35000063924722247 1.0 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462'] 42802 6125 IEPAKETTT True PC9_epitope_Rep6 988.5076908895601 988.50658993586 31.976 2 -1.1145841515649606 0.350021094079595 1.0 ['nc|ENSG00000173262|Q8TDB8-4|SLC2A14', 'ENSG00000059804|ENST00000075120|SLC2A3', 'ENSG00000173262|ENST00000431042|SLC2A14', 'nc|ENSG00000173262|Q8TDB8|SLC2A14', 'nc|ENSG00000173262|Q8TDB8-5|SLC2A14', 'ENST00000469295.1_1_12:8074011-8075632:-|nuORF', 'nc|ENSG00000173262|Q8TDB8-3|SLC2A14'] 103436 5140 SPPRQQTPPL True NCI_RA007_Epitope_Rep1 1119.60365696307 1119.60254993586 24.077 2 -1.1146050564344385 0.350021094079595 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3'] 113188 13471 TLPWEVVMV True PC9_epitope_Rep6 1072.56270366788 1072.5616099358601 63.511 2 -1.114624892599704 0.350021094079595 1.0 ['nc|ENSG00000135503|P36896-4|ACVR1B'] 22656 6435 ETPQTVPA True PC9_epitope_Rep1 841.4181476091699 841.41704993586 29.559 2 -1.1146362509727321 0.350021094079595 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 122849 2778 VGGWKHYSRW True NCI_RA007_Epitope_Rep1 1274.63087477042 1274.62921490379 14.696 3 -1.1147028742785268 0.3500632806207893 1.0 ['ENST00000003912.7_2_1:24795783-24795897:+|nuORF'] 137021 13850 YALDSESPV True NCI_RA007_Epitope_Rep4 979.44984166027 979.4492949679301 60.534 1 -1.114704910918943 0.3500632806207893 1.0 ['ENST00000508165.1_1_4:135248937-135249228:+|nuORF'] 45284 15116 IPVVEAPVV True H1975_Epitope_Rep3 921.5535188831699 921.55297496793 63.543 1 -1.1147789678435547 0.35006711409395974 1.0 ['BTN3A2|p.A189V|1|0.22|ENSG00000186470|chr6:26370454-26370454|C/T|missense_variant'] 41820 7985 IAVATSPPN True NCI_RA007_Epitope_Rep1 868.46543215476 868.4648849679301 35.053 1 -1.1147820849519425 0.35006711409395974 1.0 ['ENST00000560591.5_1_15:67835673-67951132:+|nuORF'] 91352 7799 RGWPHAAI True NCI_RA007_Epitope_Rep4 906.4824196315799 906.48132993586 36.682 2 -1.1148858529193542 0.3500830883292854 1.0 ['ENST00000541607.1_1_9:37575600-37576341:-|nuORF'] 5393 5748 ALSRGETP True NCI_RA007_Epitope_Rep2 829.4293809992099 829.42828993586 26.976 2 -1.1149064108246107 0.3500830883292854 1.0 ['ENST00000510450.1_1_3:125688183-125696014:+|nuORF', 'ENSG00000114547|ENST00000514116|ROPN1B', 'ENSG00000065371|ENST00000405845|ROPN1'] 11198 20824 DEAAYLAG True H1975_Epitope_Rep2 808.36029837988 808.35920993586 86.224 2 -1.1149270332838188 0.3500830883292854 1.0 ['GAL3ST3|p.D220E|1|0.09|ENSG00000175229|chr11:66043143-66043143|G/T|missense_variant'] 32150 6210 GEVGDLKQL True NCI_RA007_Epitope_Rep3 957.51311062317 957.51200993586 31.435 2 -1.114931357611361 0.3500830883292854 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 64472 18811 LPPYRYRFRRQ True H1975_Epitope_Rep1 1550.8582489363 1550.8571499358602 78.437 2 -1.1149654316423026 0.3500830883292854 1.0 ['CACNG3|p.R234Q|1|0.21|ENSG00000006116|chr16:24361616-24361616|G/A|missense_variant'] 117794 8391 TVWGGTCK True NCI_RA007_Epitope_Rep1 850.4007237232199 850.4001749679301 36.64 1 -1.114989577732994 0.3500869209530627 1.0 ['ENSG00000068784|ENST00000263736|SRBD1'] 131480 19503 VTKFILPGL True PC9_epitope_Rep6 986.6164534928998 986.61534993586 87.679 2 -1.1149922774448964 0.3500869209530627 1.0 ['OR5B2|p.L13P|1|0.1|ENSG00000172365|chr11:58423224-58423224|A/G|missense_variant'] 57288 20923 LEAAEFLERRE True NCI_RA007_Epitope_Rep1 1361.69392851945 1361.6928299358601 85.626 2 -1.1150465117822828 0.35009522835632023 1.0 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF', 'nc|ENSG00000119950|P50539|MXI1'] 135562 24887 WKVGVTAL True PC9_epitope_Rep4 872.51198842436 872.5114349679301 104.25 1 -1.1150790013312866 0.35009906052278394 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 10402 3450 CGMWLGVI True PC9_epitope_Rep6 877.4190166396498 877.41790993586 19.448 2 -1.1150850265154089 0.35009906052278394 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 135563 24971 WKVGVTAL True PC9_epitope_Rep4 872.51198842436 872.5114349679301 104.59 1 -1.1151367705296638 0.3501284558456996 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 103437 5235 SPPRQQTPPL True NCI_RA007_Epitope_Rep1 1119.60365696307 1119.60254993586 24.446 2 -1.1151408560015552 0.3501284558456996 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3'] 39577 11531 HLHWRMRRHMK True H1975_Epitope_Rep3 1586.8299430968202 1586.82884993586 49.479 2 -1.1152478902782401 0.3501623252128122 1.0 ['ENST00000511465.1_1_4:185263030-185268908:-|nuORF'] 126755 26060 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 105.47 3 -1.1153991391295597 0.3502044989775051 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 55185 11720 LAASVLPEHR True PC9_epitope_Rep1 1091.60874234351 1091.60764993586 49.956 2 -1.1154270331564082 0.3502044989775051 1.0 ['ENST00000531092.5_1_6:2397615-2397801:+|nuORF'] 28212 10829 FRERHHLSRHM True H1975_Epitope_Rep1 1504.7582176252001 1504.7571299358601 46.616 2 -1.11544252241916 0.3502121568426972 1.0 ['ENSG00000152784|ENST00000415738|PRDM8', 'nc|ENSG00000265763|Q96MN9-2|ZNF488', 'ENSG00000265763|ENST00000585316|ZNF488'] 57141 12634 LDTKHYPY True H1975_Epitope_Rep3 1035.50254593947 1035.5014499358601 53.802 2 -1.1154806522598857 0.3502121568426972 1.0 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 80160 9981 PFSPPFPSL True PC9_epitope_Rep4 987.50656869075 987.50546993586 46.052 2 -1.1154851380753508 0.3502121568426972 1.0 ['ENST00000301043.10_2_17:27043073-27045236:-|nuORF', 'ENST00000353676.9_1_17:27043073-27045236:-|nuORF'] 31973 2740 GEQAPGAAAPP True H1975_Epitope_Rep2 964.4614094034798 964.46030993586 14.59 2 -1.1155000194750186 0.3502121568426972 1.0 ['nc|ENSG00000006327|Q9NP84-2|TNFRSF12A'] 41299 23611 HVSLPLHA True NCI_RA007_Epitope_Rep4 872.48683630568 872.48572993586 102.42 2 -1.115609951182569 0.3502274702244032 1.0 ['nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF', 'ENSG00000163867|ENST00000357182|ZMYM6'] 133644 17112 VYAILTHGI True PC9_epitope_Rep4 985.5596668927699 985.55856993586 73.825 2 -1.115618417534711 0.3502274702244032 1.0 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 74333 5847 NENLHQLTLQ True NCI_RA007_Epitope_Rep2 1208.6149499227602 1208.6138499358601 27.361 2 -1.1156195274848966 0.3502274702244032 1.0 ['nc|ENSG00000142748|O75636-2|FCN3', 'ENSG00000142748|ENST00000270879|FCN3'] 72734 20413 MNKAHGCE True NCI_RA007_Epitope_Rep5 888.3582072882399 888.35710993586 85.455 2 -1.1156397957570516 0.3502274702244032 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 59636 11010 LGAAEKKV True PC9_epitope_Rep3 814.4912529797799 814.49014993586 47.341 2 -1.1156512054396832 0.3502274702244032 1.0 ['nc|ENSG00000145901|Q15025-7|TNIP1', 'nc|ENSG00000145901|Q15025-8|TNIP1', 'nc|ENSG00000145901|Q15025-5|TNIP1', 'nc|ENSG00000145901|Q15025-6|TNIP1', 'nc|ENSG00000145901|Q15025-4|TNIP1', 'nc|ENSG00000145901|Q15025-3|TNIP1', 'nc|ENSG00000145901|Q15025-2|TNIP1', 'ENSG00000145901|ENST00000521591|TNIP1'] 117413 11253 TVPRVVAVSP True H1975_Epitope_Rep1 1023.6076797143498 1023.6065899358599 48.26 2 -1.115658371778561 0.3502274702244032 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 30826 13767 GAPEFRVASSV True PC9_epitope_Rep5 1118.57202248162 1118.57092993586 57.977 2 -1.1156631213726291 0.3502274702244032 1.0 ['nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2', 'ENST00000451868.2_1_12:123484929-123519149:-|nuORF'] 5748 6582 APARLPAAPA True PC9_epitope_Rep2 933.5396001545298 933.53850993586 30.732 2 -1.1156750616035445 0.3502274702244032 1.0 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 102603 12051 SLWGPYKDI True PC9_epitope_Rep5 1077.54949613189 1077.54838993586 51.348 2 -1.1157330417708609 0.35024407698009047 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 11150 23553 DDHYRTGTRF True NCI_RA007_Epitope_Rep5 1266.57414773994 1266.57250490379 97.909 3 -1.1157374464794174 0.35024407698009047 1.0 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 41051 6173 HTLLSYVHF True H1975_Epitope_Rep3 1115.57637958607 1115.5752899358602 28.755 2 -1.1157421337348916 0.35024790431404623 1.0 ['ENSG00000176922|ENST00000322101|OR51S1'] 89169 13374 QVRRLMPVDMI True NCI_RA007_Epitope_Rep1 1356.7369967150798 1356.73588993586 56.025 2 -1.115746697043242 0.35024790431404623 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 135528 23564 WKKKYEET True H1975_Epitope_Rep2 1110.5709598524597 1110.5698699358602 97.124 2 -1.1158942360182047 0.35029454234126023 1.0 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522752.5_1_8:38614850-38697853:+|nuORF', 'nc|ENSG00000147526|O75410-10|TACC1'] 464 7696 AALTCWKTFL True PC9_epitope_Rep3 1152.6001518057599 1152.5985149037901 34.599 3 -1.11602267443133 0.3503149716972694 1.0 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 101963 13141 SLQFERGTL True PC9_epitope_Rep2 1049.5505587610498 1049.54946993586 55.819 2 -1.1160377126867906 0.3503149716972694 1.0 ['nc|ENSG00000183146|Q9H606|PRORY'] 18817 9546 ELDLGLGPR True NCI_RA007_Epitope_Rep1 968.5290950404799 968.52798993586 41.129 2 -1.1160423226906615 0.3503149716972694 1.0 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 37442 23710 GVTLGRHRRR True PC9_epitope_Rep1 1206.71700443622 1206.71590993586 95.995 2 -1.116048695700635 0.3503149716972694 1.0 ['ENST00000493449.5_1_16:322367-324481:-|nuORF'] 114911 12995 TQSQYQAL True PC9_epitope_Rep5 937.4505103666098 937.44940993586 54.994 2 -1.1160970839456867 0.35036160588791493 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 78974 22612 PAIPICSIPV True PC9_epitope_Rep3 1008.56778904832 1008.5672749679301 92.245 1 -1.116104522310924 0.3503699065969871 1.0 ['nc|ENSG00000101096|Q13469-5|NFATC2', 'nc|ENSG00000101096|Q13469-3|NFATC2', 'nc|ENSG00000101096|Q13469-4|NFATC2', 'ENSG00000101096|ENST00000371564|NFATC2', 'nc|ENSG00000101096|Q13469|NFATC2'] 114104 16855 TPGEGPSTFVL True PC9_epitope_Rep5 1103.54989005471 1103.5487899358602 69.843 2 -1.1161444586195195 0.3503909843606256 1.0 ['MAGEE1|p.S271F|1|0.16|ENSG00000198934|chrX:76428742-76428742|C/T|missense_variant'] 10400 3299 CGMWLGVI True PC9_epitope_Rep6 877.4190166396498 877.41790993586 18.772 2 -1.1162257020203095 0.3504376157924998 1.0 ['ENST00000380756.7_1_2:25457150-25462270:-|nuORF'] 76075 2606 NMFEFLKSMR True PC9_epitope_Rep1 1301.6260492837698 1301.62441490379 14.316 3 -1.1162564945705646 0.3504452592980618 1.0 ['CYP8B1|p.R59S|1|0.38|ENSG00000180432|chr3:42875642-42875642|G/T|missense_variant'] 86129 12244 QIAPQLWKMSI True NCI_RA007_Epitope_Rep2 1313.71657854033 1313.7154899358602 52.227 2 -1.116256861877396 0.3504452592980618 1.0 ['ENST00000550125.5_1_12:49399131-49412528:-|nuORF'] 92000 8546 RKRKKRDSEEE True PC9_epitope_Rep3 1459.78553748851 1459.78390490379 37.827 3 -1.116260589665728 0.3504452592980618 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 8483 11339 ATRFRWWQPRH True H1975_Epitope_Rep1 1539.7959830329098 1539.79488993586 48.592 2 -1.1162901803750611 0.3504452592980618 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 87026 7217 QMRRKHYYRSY True NCI_RA007_Epitope_Rep2 1586.78884904714 1586.78719490379 32.691 3 -1.116349437181489 0.3504874091298182 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 126602 12203 VLMAQKEGKR True NCI_RA007_Epitope_Rep3 1158.65431263694 1158.65320993586 55.133 2 -1.1163495178638374 0.3504874091298182 1.0 ['ENSG00000170949|ENST00000683776|ZNF160'] 112601 9952 TLERWHTITHA True NCI_RA007_Epitope_Rep2 1363.6996826062302 1363.6985899358601 43.338 2 -1.1164141875887117 0.35054681112019626 1.0 ['nc|ENSG00000170820|P23945-2|FSHR', 'nc|ENSG00000170820|P23945-3|FSHR', 'ENSG00000170820|ENST00000406846|FSHR', 'nc|ENSG00000170820|P23945-4|FSHR'] 66338 4996 LSGAINEK True NCI_RA007_Epitope_Rep1 830.44978209062 830.44868993586 23.516 2 -1.1164893098388213 0.3505748594787941 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9', 'TBC1D9|p.G735Efs*4|1|0.16|ENSG00000109436|chr4:140657530-140657530|C/-|frameshift_variant'] 116181 12924 TSVLEANSKI True PC9_epitope_Rep4 1060.57643915572 1060.57534993586 57.597 2 -1.116538486251194 0.3505748594787941 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 65143 15461 LQNRRLFQSLH True PC9_epitope_Rep2 1410.7844152896998 1410.7833099358602 64.748 2 -1.1166083452436448 0.3505748594787941 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 98521 7002 SFLVRAGK True NCI_RA007_Epitope_Rep1 876.5181364339599 876.51702993586 31.234 2 -1.1166116828257282 0.3505748594787941 1.0 ['ENST00000560048.2_1_15:65743312-65748006:-|nuORF', 'nc|ENSG00000074603|Q6V1X1-6|DPP8', 'nc|ENSG00000074603|Q6V1X1-4|DPP8', 'nc|ENSG00000074603|Q6V1X1-2|DPP8', 'nc|ENSG00000074603|Q6V1X1-5|DPP8', 'ENSG00000074603|ENST00000300141|DPP8', 'nc|ENSG00000074603|Q6V1X1|DPP8'] 60662 21649 LHLLLLDGFS True PC9_epitope_Rep1 1126.63864548946 1126.63754993586 88.101 2 -1.1166156671641738 0.3505748594787941 1.0 ['PCDHB10|p.V663L|1|0.8|ENSG00000120324|chr5:141194539-141194539|G/T|missense_variant'] 124143 20518 VGSRRGRR True PC9_epitope_Rep6 942.5583785364998 942.55783496793 91.652 1 -1.1166223759441538 0.3505748594787941 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 46852 15354 ITKEKLHTI True PC9_epitope_Rep4 1081.6495445263301 1081.64844993586 66.991 2 -1.1166264982504603 0.3505748594787941 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 130040 16108 VSAVLQTQ True PC9_epitope_Rep6 844.46543215476 844.46432993586 74.299 2 -1.116632192959318 0.3505748594787941 1.0 ['nc|ENSG00000129103|Q8NBJ7-3|SUMF2', 'nc|ENSG00000129103|Q8NBJ7-4|SUMF2'] 121595 10350 VFFIMLIV True PC9_epitope_Rep1 980.57689718004 980.57578993586 44.692 2 -1.1167078822970369 0.3506042257479369 1.0 ['ENSG00000265808|ENST00000578049|SEC22B'] 13122 12674 DLQTQLSHEI True H1975_Epitope_Rep3 1182.5880664685799 1182.58696993586 53.96 2 -1.1167183702954986 0.3506042257479369 1.0 ['ENSG00000102978|ENST00000219252|POLR2C'] 109259 4352 TATAPPKPP True H1975_Epitope_Rep2 878.4861675993399 878.48506993586 21.856 2 -1.1168332004918486 0.35065465925783995 1.0 ['ENSG00000136367|ENST00000419474|ZFHX2'] 5963 12017 APHLQHNAF True NCI_RA007_Epitope_Rep4 1033.5093626554099 1033.5082699358602 53.228 2 -1.1168620564383562 0.35065465925783995 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 49502 6157 KFGPWKAV True PC9_epitope_Rep5 931.5279728416698 931.52686993586 28.667 2 -1.1168664714942844 0.35065465925783995 1.0 ['nc|ENSG00000151364|Q9BQ13-2|KCTD14', 'ENSG00000151364|ENST00000353172|KCTD14'] 18269 12390 EIQVGNIIPLF True NCI_RA007_Epitope_Rep2 1241.70197402201 1241.70147496793 52.8 1 -1.1168922021971968 0.3506629537848402 1.0 ['ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 15360 9608 EAGPEVDPEE True H1975_Epitope_Rep1 1070.44039917538 1070.4393099358601 41.883 2 -1.1169908675945144 0.3506840216127837 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'KDM4B-AKAP8L|1|fusion'] 123018 13693 VGIKDGPL True H1975_Epitope_Rep2 797.4647038787699 797.46360993586 57.812 2 -1.1170286844082757 0.35068717110305014 1.0 ['ZNF554|p.E98D|1|0.63|ENSG00000172006|chr19:2832343-2832343|G/T|missense_variant'] 75506 9408 NKNQLKQL True PC9_epitope_Rep2 984.5716285587998 984.57052993586 41.528 2 -1.1170446705399937 0.35068717110305014 1.0 ['ENSG00000083535|ENST00000326291|PIBF1', 'nc|ENSG00000083535|Q8WXW3-4|PIBF1', 'ENST00000492803.1_1_13:73372062-73409389:+|nuORF'] 14022 10301 DRGQPWRPP True NCI_RA007_Epitope_Rep3 1107.5573754769898 1107.5562699358602 47.589 2 -1.1170458487826316 0.35068717110305014 1.0 ['ENST00000303961.8_1_19:41313938-41314193:+|nuORF'] 132035 12262 VTSVLLCFIF True H1975_Epitope_Rep3 1140.62530392444 1140.62420993586 52.344 2 -1.1170723491366885 0.35068717110305014 1.0 ['ENSG00000108622|ENST00000579788|ICAM2'] 13127 9904 DLQVNDHVRK True H1975_Epitope_Rep1 1222.64183337694 1222.64072993586 43.031 2 -1.1170742358311252 0.35068717110305014 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 41886 7272 ICLILMASV True PC9_epitope_Rep4 961.53404639189 961.53294993586 35.286 2 -1.1171461439661337 0.3507210095410829 1.0 ['ENST00000537699.1_1_12:10603035-10603776:-|nuORF', 'nc|ENSG00000134545|P26715-2|KLRC1', 'ENSG00000134545|ENST00000359151|KLRC1'] 126792 10005 VLPNIQGVLLP True PC9_epitope_Rep3 1161.71214478289 1161.71050490379 43.438 3 -1.117213806602924 0.3507375949932946 1.0 ['ENST00000454426.1_1_6:25882256-25882391:-|nuORF'] 8677 5520 AVAITAGR True PC9_epitope_Rep3 757.44463714053 757.44354993586 26.314 2 -1.1172180466886128 0.3507375949932946 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 130708 6816 VSVGGGGG True NCI_RA007_Epitope_Rep5 588.2867395168 588.2861949679301 32.904 1 -1.1172787756589369 0.35075865944620416 1.0 ['nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 74532 11609 NFNYEQRG True PC9_epitope_Rep1 1026.4519073489398 1026.4508099358602 49.533 2 -1.1173871948714087 0.3507911574269185 1.0 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5'] 136163 4159 WRRRLLPWDNM True NCI_RA007_Epitope_Rep2 1541.8037708352897 1541.80213490379 20.817 3 -1.1173881415978535 0.3507911574269185 1.0 ['ENST00000552949.1_1_12:69753653-69756720:+|nuORF', 'ENST00000549685.5_1_12:69753653-69755108:+|nuORF'] 56399 7664 LDDWIQQVET True H1975_Epitope_Rep1 1245.5877321154098 1245.5866299358602 34.452 2 -1.117448751545642 0.3507911574269185 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.M1410Ifs*7|1|0.15|ENSG00000151914|chr6:56625244-56625244|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 123259 9268 VGLKGATL True H1975_Epitope_Rep2 757.46978925921 757.46868993586 40.605 2 -1.11745896174155 0.3507911574269185 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ATG2B|p.E1224Dfs*7|1|0.12|ENSG00000066739|chr14:96313406-96313407|-/A|frameshift_variant'] 82245 22199 PPEPADLPLP True PC9_epitope_Rep1 1044.54916177872 1044.5480699358602 90.208 2 -1.1174667306140647 0.3507911574269185 1.0 ['ENSG00000130052|ENST00000374599|STARD8', 'STARD8|p.A398Hfs*61|1|0.27|ENSG00000130052|chrX:68718345-68718345|G/-|frameshift_variant', 'nc|ENSG00000130052|Q92502|STARD8'] 36261 14643 GVDVAQGLEP True PC9_epitope_Rep1 983.4923751785899 983.49126993586 61.147 2 -1.1174716090372123 0.3507911574269185 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'nc|ENSG00000075702|O43379-3|WDR62', 'ENST00000378860.8_1_19:36545867-36564559:+|nuORF', 'nc|ENSG00000075702|O43379-2|WDR62', 'ENST00000589953.1_1_19:36562547-36565998:+|nuORF'] 74081 8503 NDNSLNHEYLP True PC9_epitope_Rep3 1314.5840437173 1314.5829499358601 37.667 2 -1.1174803842324519 0.3507911574269185 1.0 ['ENSG00000120053|ENST00000370508|GOT1', 'nc|ENSG00000120053|P17174-2|GOT1', 'ENST00000471741.1_1_10:101180368-101190322:-|nuORF'] 94033 19645 RRKRKWQRQKE True NCI_RA007_Epitope_Rep2 1597.9389588684896 1597.9378699358601 81.363 2 -1.1175288554512233 0.3508077389694145 1.0 ['ENST00000418635.6_1_6:35378793-35391776:+|nuORF', 'ENST00000360694.7_1_6:35378793-35389621:+|nuORF'] 66158 8800 LSEPRMLW True H1975_Epitope_Rep2 1030.5269868655 1030.52588993586 38.815 2 -1.117552011908887 0.3508077389694145 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 65136 10474 LQNRRLFQSLH True H1975_Epitope_Rep3 1410.7844152896998 1410.7833099358602 45.351 2 -1.1175672704405397 0.3508287998365387 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 115798 11875 TSDHSRRHLLR True H1975_Epitope_Rep1 1376.73852772644 1376.73742993586 50.675 2 -1.1175773378475473 0.35083708991533324 1.0 ['ENST00000268699.8_3_16:90109761-90110142:+|nuORF'] 4545 25362 AKKHRLSRW True PC9_epitope_Rep2 1180.6941437333198 1180.6935749679299 103.23 1 -1.117595042484329 0.3508453797823977 1.0 ['GPATCH2L|p.Q166H|1|0.27|ENSG00000089916|chr14:76154861-76154861|G/T|missense_variant'] 98666 14393 SGCGGPHG True NCI_RA007_Epitope_Rep2 670.24930846226 670.24875496793 60.65 1 -1.1176497223365633 0.3508619588813689 1.0 ['ENST00000591087.1_1_19:46144824-46145007:+|nuORF'] 94362 4093 RRRPGCPA True NCI_RA007_Epitope_Rep5 911.4871877421898 911.4866349679301 22.21 1 -1.1177168757933753 0.3508619588813689 1.0 ['ENST00000442815.1_1_21:44781197-44781521:-|nuORF'] 72320 24089 MIKTAKKSFVV True PC9_epitope_Rep3 1250.74206501218 1250.74042490379 97.943 3 -1.1177365548248717 0.35086509608631805 1.0 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 46377 11136 ISRWFEVERRE True H1975_Epitope_Rep1 1505.77391017565 1505.77280993586 47.802 2 -1.1177438249781286 0.35086509608631805 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 62173 10498 LLEMMEEV True NCI_RA007_Epitope_Rep3 992.4558556408399 992.45474993586 48.355 2 -1.1177582564206179 0.35086509608631805 1.0 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'nc|ENSG00000150712|Q9C0I1-3|MTMR12'] 137998 15780 YFRRIHDYLEN True PC9_epitope_Rep3 1524.74736107464 1524.74517987172 65.855 4 -1.1177755524392132 0.35086509608631805 1.0 ['ENSG00000184995|ENST00000448696|IFNE'] 48493 6170 KAGLCWWSL True PC9_epitope_Rep3 1062.53207224594 1062.5309699358602 28.776 2 -1.1177893168114852 0.35086509608631805 1.0 ['ENST00000454738.5_1_7:6456256-6487444:-|nuORF'] 84527 8257 QAQILEPKP True H1975_Epitope_Rep1 1022.5760452328999 1022.57494993586 36.699 2 -1.1178600498016715 0.35089892231472497 1.0 ['nc|ENSG00000159267|P50747|HLCS', 'ENSG00000159267|ENST00000674895|HLCS'] 126774 9715 VLPGVDRLP True H1975_Epitope_Rep1 964.5705659296399 964.56946993586 42.296 2 -1.1178921729660984 0.3509072104396236 1.0 ['nc|ENSG00000100105|Q9HBE1-4|PATZ1', 'nc|ENSG00000100105|Q9HBE1-2|PATZ1', 'nc|ENSG00000100105|Q9HBE1-3|PATZ1', 'ENSG00000100105|ENST00000266269|PATZ1'] 52456 17077 KKSQSRPL True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 75.04 2 -1.117941168979695 0.3509665721800863 1.0 ['ENSG00000152749|ENST00000376958|GPR180'] 46344 16709 ISRCKTGVW True PC9_epitope_Rep2 1048.54878493924 1048.54768993586 69.518 2 -1.117958860590597 0.3509748592295612 1.0 ['ENST00000436108.6_1_11:903065-904743:-|nuORF'] 44223 21117 IKKETKGKGS True PC9_epitope_Rep6 1074.6397081186199 1074.6386099358601 94.066 2 -1.1179806919054025 0.3509786647259356 1.0 ['ENSG00000126524|ENST00000246868|SBDS'] 98416 17198 SFENTQRVR True PC9_epitope_Rep4 1135.5734194639497 1135.5723299358601 74.158 2 -1.1180126504402577 0.3509786647259356 1.0 ['nc|ENSG00000188089|Q3MJ16|PLA2G4E', 'ENSG00000188089|ENST00000696112|PLA2G4E'] 16465 10863 EELGYEYM True H1975_Epitope_Rep3 1032.4110136233999 1032.41047496793 46.866 1 -1.1181030674681691 0.3509997191082965 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 142179 19220 YVTLHVSEVP True PC9_epitope_Rep3 1142.5971746003 1142.5960699358602 79.15 2 -1.1182048144619718 0.35105907587809454 1.0 ['ENSG00000167721|ENST00000301364|TSR1'] 18270 13691 EIQVHQKLVAQ True PC9_epitope_Rep1 1291.7248347249101 1291.72372993586 57.515 2 -1.118343632635461 0.35110430231073664 1.0 ['nc|ENSG00000135365|Q96BD5-2|PHF21A', 'nc|ENSG00000135365|Q96BD5|PHF21A', 'ENSG00000135365|ENST00000676320|PHF21A'] 124567 22021 VGVRRRGNVRT True PC9_epitope_Rep4 1268.7537838677597 1268.7526899358602 92.926 2 -1.1183689494280562 0.35110430231073664 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 47416 12478 IVLLVWRMH True NCI_RA007_Epitope_Rep2 1165.67940518597 1165.6783099358602 53.147 2 -1.1184211664664825 0.35110430231073664 1.0 ['BCL2L11|p.R192L|1|0.24|ENSG00000153094|chr2:111164209-111164209|G/T|missense_variant'] 86820 11259 QLPWWQWLKWR True H1975_Epitope_Rep1 1625.86193733441 1625.8608499358602 48.284 2 -1.1184543419488833 0.35110430231073664 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 112145 19532 TIYRRVLP True PC9_epitope_Rep2 1016.6130994479598 1016.61200993586 80.513 2 -1.1184625145924325 0.35110430231073664 1.0 ['PLCE1|p.M1447Cfs*10|1|0.21|ENSG00000138193|chr10:94268983-94268983|G/-|frameshift_variant', 'nc|ENSG00000138193|Q9P212-2|PLCE1', 'PLCE1|p.I2250Ffs*27|1|0.4|ENSG00000138193|chr10:94324918-94324918|C/-|frameshift_variant', 'ENSG00000138193|ENST00000371380|PLCE1'] 59378 8632 LFLGVGSLG True NCI_RA007_Epitope_Rep3 861.4960040070499 861.49490993586 41.029 2 -1.1184657779978215 0.35110430231073664 1.0 ['ENST00000395468.8_1_14:55534598-55534688:+|nuORF'] 29272 8370 FVAFYMDYLYT True NCI_RA007_Epitope_Rep1 1431.6420761873899 1431.64042490379 36.559 3 -1.1185072266751404 0.35110430231073664 1.0 ['VPS13B|p.G534V|1|0.16|ENSG00000132549|chr8:99136702-99136702|G/T|missense_variant'] 13017 12502 DLNEALTQPV True PC9_epitope_Rep2 1098.55570371114 1098.55460993586 53.398 2 -1.1185245359617786 0.3511125863323588 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 78090 6673 NVWRFPYLCY True H1975_Epitope_Rep1 1359.6434136000698 1359.64230993586 30.72 2 -1.1186045905941062 0.3511336363172139 1.0 ['ENSG00000010379|ENST00000343164|SLC6A13', 'nc|ENSG00000010379|Q9NSD5-2|SLC6A13', 'ENST00000489764.1_1_1:44476359-44489988:-|nuORF', 'nc|ENSG00000010379|Q9NSD5-3|SLC6A13', 'nc|ENSG00000132164|P48066-2|SLC6A11', 'SLC6A12|p.I352Ffs*20|1|0.25|ENSG00000111181|chr12:197399-197399|G/-|frameshift_variant', 'ENSG00000103546|ENST00000568943|SLC6A2', 'nc|ENSG00000103546|P23975-2|SLC6A2', 'ENSG00000111181|ENST00000684302|SLC6A12', 'ENSG00000130821|ENST00000253122|SLC6A8', 'ENST00000476466.1_1_X:152954203-152956038:+|nuORF', 'ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6', 'ENSG00000132164|ENST00000254488|SLC6A11', 'ENSG00000142319|ENST00000270349|SLC6A3', 'ENSG00000196517|ENST00000372310|SLC6A9', 'nc|ENSG00000196517|P48067-3|SLC6A9', 'nc|ENSG00000196517|P48067|SLC6A9'] 75352 12245 NISCKASQDI True PC9_epitope_Rep5 1077.5124590001699 1077.51136993586 52.088 2 -1.1186395523756163 0.35114191975285003 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 67147 6052 LSQRNSLP True PC9_epitope_Rep1 913.4981292653699 913.49702993586 28.092 2 -1.118652107277686 0.35116228602065436 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'ENST00000514858.5_1_4:2082849-2194957:-|nuORF', 'nc|ENSG00000130997|Q7Z5Q5-3|POLN', 'ENST00000515357.5_1_4:2158125-2230958:-|nuORF'] 47014 11356 ITQVYGFY True PC9_epitope_Rep2 989.4858332461697 989.48472993586 49.004 2 -1.1186713656868934 0.35116228602065436 1.0 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 97711 18852 SEIEILAVDLP True PC9_epitope_Rep1 1197.6492697428098 1197.64816993586 77.298 2 -1.1186723198551372 0.35116228602065436 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 121282 18114 VETLTIRR True H1975_Epitope_Rep1 986.58727862294 986.58618993586 75.472 2 -1.1187017735046092 0.35116228602065436 1.0 ['ENSG00000137462|ENST00000642700|TLR2'] 127609 13300 VNYGCSLK True NCI_RA007_Epitope_Rep1 882.42693847106 882.4263849679301 55.736 1 -1.1187148132388902 0.35119161592565645 1.0 ['ENST00000517458.1_1_8:127565648-127568649:-|nuORF'] 20270 11917 ENQKLLQELK True H1975_Epitope_Rep1 1241.69795127073 1241.6968499358602 50.84 2 -1.1187202302818302 0.35119161592565645 1.0 ['ENSG00000165325|ENST00000298050|DEUP1'] 36580 7494 GVHLEMMSPG True PC9_epitope_Rep5 1056.47323704048 1056.47212993586 33.775 2 -1.1187435306555358 0.3511998978810314 1.0 ['FAM171A1|p.S820*|1|0.11|ENSG00000148468|chr10:15213129-15213129|G/-|frameshift_variant', 'ENSG00000148468|ENST00000378116|FAM171A1'] 62213 9710 LLETGDLRWP True PC9_epitope_Rep2 1198.6346227381798 1198.63352993586 42.687 2 -1.118765404595869 0.35120817962497286 1.0 ['ENST00000382911.8_2_18:51884960-51885041:+|nuORF'] 5203 9805 ALNKHQHREDH True PC9_epitope_Rep5 1383.67559311671 1383.67393490379 42.682 3 -1.1188015689543365 0.35123165283982133 1.0 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'BPTF|p.I1089Rfs*7|1|0.07|ENSG00000171634|chr17:67909656-67909657|-/GACAAAGGTC|frameshift_variant', 'ENST00000579209.1_1_17:62758032-62758825:-|nuORF'] 26819 23084 FLAPRIHQL True PC9_epitope_Rep1 1093.63964854897 1093.63854993586 93.594 2 -1.1188067485514455 0.35123165283982133 1.0 ['ENST00000550078.2_2_1:203798716-203798749:+|nuORF'] 71510 11288 LYYVYMGLL True PC9_epitope_Rep5 1133.5831047592899 1133.58200993586 48.412 2 -1.1188493559436004 0.35123165283982133 1.0 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF', 'ENST00000533687.1_1_11:118969111-118971155:-|nuORF'] 46350 3036 ISREQMILWD True NCI_RA007_Epitope_Rep1 1289.6438075228898 1289.64217490379 15.685 3 -1.118912118772858 0.35123165283982133 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B', 'PDE3B|p.P839Lfs*47|1|0.83|ENSG00000152270|chr11:14844019-14844019|C/-|frameshift_variant', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 55756 10083 LALTDMGL True PC9_epitope_Rep3 832.4364405255999 832.43534993586 43.738 2 -1.1189368030113902 0.35123165283982133 1.0 ['OR51Q1|p.L73M|1|0.18|ENSG00000167360|chr11:5422417-5422417|C/A|missense_variant'] 66925 21091 LSNRVWSI True PC9_epitope_Rep4 973.53451477409 973.53340993586 89.289 2 -1.1189777466181505 0.35123165283982133 1.0 ['nc|ENSG00000106785|Q14142-4|TRIM14', 'nc|ENSG00000106785|Q14142-2|TRIM14', 'nc|ENSG00000106785|Q14142-3|TRIM14', 'ENSG00000106785|ENST00000341469|TRIM14'] 17093 7226 EGLHHQRPK True H1975_Epitope_Rep3 1100.583924578 1100.5828299358602 32.766 2 -1.1190430863450755 0.35123165283982133 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 111999 15324 TIRPVKGP True PC9_epitope_Rep1 866.5337864980999 866.53268993586 63.763 2 -1.1190511731535013 0.35123165283982133 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 47536 7653 IVSPPLPAPP True NCI_RA007_Epitope_Rep3 986.5800679841799 986.57896993586 37.226 2 -1.1191068719776238 0.35123165283982133 1.0 ['ENST00000560349.1_1_14:24531731-24532082:+|nuORF'] 5476 4354 ALWAAAWG True NCI_RA007_Epitope_Rep1 844.4231734199599 844.42206993586 21.042 2 -1.1191624372078057 0.3512430445658278 1.0 ['HAPLN4|p.G212Afs*12|1|0.5|ENSG00000187664|chr19:19258705-19258705|C/-|frameshift_variant', 'ENSG00000187664|ENST00000291481|HAPLN4'] 77437 12285 NSNAVLSF True PC9_epitope_Rep3 850.41848196234 850.41738993586 52.282 2 -1.119191326618903 0.3512430445658278 1.0 ['ENST00000370339.7_1_20:61827244-61827448:-|nuORF'] 24142 14104 EYPTKYRMFIW True H1975_Epitope_Rep3 1532.7486069446 1532.74750993586 59.579 2 -1.1192104951892348 0.3512430445658278 1.0 ['nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31', 'ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31'] 20438 17601 EPGADAPLEL True PC9_epitope_Rep3 1010.49204082542 1010.49094993586 72.889 2 -1.1192509170155993 0.3512430445658278 1.0 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1', 'nc|ENSG00000076928|Q92888-4|ARHGEF1'] 67010 10356 LSPLRFEP True PC9_epitope_Rep3 957.5283667644899 957.52726993586 44.777 2 -1.1193271329426053 0.3512430445658278 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 28354 3855 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 19.928 2 -1.119346630371871 0.3512430445658278 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 136648 6687 WWRRRWTRSQW True H1975_Epitope_Rep1 1702.8705449554998 1702.86944993586 30.77 2 -1.1193847496771108 0.35126788243852014 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 59820 11903 LGETRQKL True PC9_epitope_Rep5 943.5450794577899 943.5439899358599 50.781 2 -1.1194057571963703 0.35126788243852014 1.0 ['ENSG00000196684|ENST00000613986|HSH2D', 'nc|ENSG00000196684|Q96JZ2-2|HSH2D'] 76113 70 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 0.38349 3 -1.1194078186687237 0.35126788243852014 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 100817 11232 SLEKIFKE True PC9_epitope_Rep1 992.5542471591599 992.55314993586 48.084 2 -1.1194856799182744 0.3512889229198571 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP', 'ENST00000473914.1_1_5:96332105-96341995:+|nuORF'] 36652 7866 GVIFLNGN True NCI_RA007_Epitope_Rep2 832.44430278736 832.44320993586 35.227 2 -1.119542295757971 0.3512972014139687 1.0 ['MAGEB2|p.D251Ifs*36|1|0.42|ENSG00000099399|chrX:30219331-30219331|G/-|frameshift_variant', 'ENSG00000099399|ENST00000378988|MAGEB2', 'ENSG00000176774|ENST00000325250|MAGEB18'] 129499 16551 VRKKRRGFSEI True NCI_RA007_Epitope_Rep2 1374.8208007984197 1374.8191649037901 69.109 3 -1.1195622241067076 0.3513054796967918 1.0 ['ENST00000480842.1_1_6:160211577-160211676:+|nuORF'] 27640 7993 FPERALAAELP True NCI_RA007_Epitope_Rep1 1212.6502728023197 1212.64916993586 35.083 2 -1.1195832745122243 0.3513092746669389 1.0 ['ENST00000337554.7_1_22:43547558-43555226:+|nuORF'] 98668 24134 SGCGGSAA True H1975_Epitope_Rep3 608.22242500808 608.22187496793 100.56 1 -1.1195941818858388 0.3513092746669389 1.0 ['ENST00000566637.5_1_16:88780822-88781656:+|nuORF'] 137935 8213 YFEAKWQFYLE True PC9_epitope_Rep1 1522.7132669817 1522.7121699358602 36.424 2 -1.1196641467627653 0.35134307407643717 1.0 ['ENSG00000153531|ENST00000612156|ADPRHL1', 'nc|ENSG00000153531|Q8NDY3-2|ADPRHL1', 'nc|ENSG00000153531|Q8NDY3|ADPRHL1'] 50067 19656 KKGAGGGG True PC9_epitope_Rep2 630.34492309926 630.3443749679301 80.991 1 -1.1197190144339282 0.3513461783845859 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 16931 9452 EFRALIAEPR True PC9_epitope_Rep5 1200.6615061923599 1200.65986490379 41.312 3 -1.1197207451817284 0.3513461783845859 1.0 ['nc|ENSG00000089091|Q9NVP4-3|DZANK1', 'nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1', 'nc|ENSG00000089091|Q9NVP4-2|DZANK1', 'nc|ENSG00000089091|Q9NVP4-4|DZANK1'] 100064 8222 SIRRELLRMFH True PC9_epitope_Rep2 1456.8085218625597 1456.80688490379 36.984 3 -1.1197411153185823 0.3513461783845859 1.0 ['ENSG00000185085|ENST00000330574|INTS5', 'INTS5|p.E601Nfs*21|1|0.24|ENSG00000185085|chr11:62648279-62648279|C/-|frameshift_variant'] 19798 9212 ELSLLEKSL True PC9_epitope_Rep6 1030.5910265907 1030.58992993586 45.573 2 -1.1197513454131376 0.3513461783845859 1.0 ['EEF1E1|p.V79Sfs*4|1|0.18|ENSG00000124802|chr6:8097320-8097320|C/-|frameshift_variant', 'nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 80096 13448 PFLTALKY True H1975_Epitope_Rep1 951.5429541994699 951.54184993586 56.842 2 -1.1197731355185525 0.3513461783845859 1.0 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2', 'AKT2|p.H209L|1|0.18|ENSG00000105221|chr19:40240058-40240058|T/A|missense_variant', 'nc|ENSG00000142208|P31749-2|AKT1', 'ENSG00000142208|ENST00000649815|AKT1'] 117250 22138 TVLTEEVF True PC9_epitope_Rep3 936.48041351256 936.47930993586 90.443 2 -1.1198508381473704 0.351353075519604 1.0 ['nc|ENSG00000258659|Q9BYJ4-2|TRIM34', 'ENST00000491385.1_1_11:5653561-5662456:+|nuORF', 'ENSG00000258659|ENST00000429814|TRIM34'] 88460 8497 QSRQDVLEKYY True H1975_Epitope_Rep3 1427.70449320315 1427.70338993586 37.669 2 -1.1199447483676568 0.351353075519604 1.0 ['ENSG00000172817|ENST00000310193|CYP7B1'] 65920 12097 LSDQQDEERRR True NCI_RA007_Epitope_Rep1 1430.68621737006 1430.68512993586 51.043 2 -1.1199502865746458 0.351353075519604 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1'] 47555 5810 IVTSSLLG True H1975_Epitope_Rep1 788.4643695256 788.46326993586 27.42 2 -1.1199571757454085 0.351353075519604 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 130528 13710 VSQRRNTT True NCI_RA007_Epitope_Rep5 960.5100909314 960.50898993586 59.421 2 -1.1199720556227302 0.351353075519604 1.0 ['ENSG00000105738|ENST00000222345|SIPA1L3'] 83632 28061 PVDRIFDDKW True PC9_epitope_Rep1 1289.6404363946099 1289.63878490379 115.58 3 -1.120043287359537 0.351353075519604 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 49051 16209 KEGQEQLLRYQ True PC9_epitope_Rep4 1390.7204776204599 1390.7193899358601 70.292 2 -1.120049776024974 0.351353075519604 1.0 ['ENSG00000170927|ENST00000371117|PKHD1'] 129063 13423 VQNYTVNILGK True NCI_RA007_Epitope_Rep2 1247.68738658703 1247.68628993586 56.855 2 -1.120138959346983 0.3513772118954365 1.0 ['ADNP2|p.E144K|1|0.1|ENSG00000101544|chr18:80135843-80135843|G/A|missense_variant'] 127459 21666 VNIWRKRTRK True PC9_epitope_Rep6 1355.82622053203 1355.82457490379 96.222 3 -1.120150458587812 0.3513772118954365 1.0 ['ENST00000534796.5_1_1:32396577-32396640:-|nuORF'] 18735 8452 ELASMLWRIRW True PC9_epitope_Rep3 1459.7758247519498 1459.77418490379 37.475 3 -1.1201799276515667 0.3513772118954365 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 67796 6792 LTAAAPASP True PC9_epitope_Rep6 797.42831837005 797.4272299358599 34.953 2 -1.120209761041672 0.3513772118954365 1.0 ['ENSG00000135164|ENST00000331242|DMTF1', 'ENST00000425406.5_1_7:86817376-86824453:+|nuORF', 'ENST00000547146.6_1_7:86813892-86824453:+|nuORF', 'ENST00000447863.5_1_7:86811523-86824453:+|nuORF', 'nc|ENSG00000135164|Q9Y222-5|DMTF1', 'ENST00000580803.1_1_7:86817463-86822708:+|nuORF'] 81529 17940 PLHWVCKKVR True NCI_RA007_Epitope_Rep1 1264.7226669802799 1264.72156993586 73.919 2 -1.1202137392458644 0.3513772118954365 1.0 ['ENST00000538029.1_1_12:9102760-9162130:+|nuORF', 'ENSG00000139187|ENST00000356986|KLRG1'] 1343 7740 AEDYFNVSL True PC9_epitope_Rep4 1056.47639076128 1056.47528993586 37.162 2 -1.1202459792488009 0.3513772118954365 1.0 ['nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1', 'ENSG00000254221|ENST00000523390|PCDHGB1'] 10223 133 CCCCCCSH True PC9_epitope_Rep1 860.1566136546801 860.15550993586 0.72865 2 -1.120278607192722 0.351381004018626 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 133257 24081 VVTLLSNY True PC9_epitope_Rep3 907.50148331031 907.50038993586 97.913 2 -1.1202884897687975 0.351381004018626 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 68131 15379 LTDPQIHSV True PC9_epitope_Rep6 1008.52400966004 1008.52290993586 71.301 2 -1.1203154583435857 0.35138479594830774 1.0 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 44773 10621 IMEQFHMREI True PC9_epitope_Rep5 1332.6318629402 1332.63022490379 45.841 3 -1.1203960977760408 0.35138479594830774 1.0 ['ENSG00000213139|ENST00000307944|CRYGS'] 67582 10537 LSTYTTLR True PC9_epitope_Rep4 953.51819600361 953.51708993586 48.258 2 -1.1204675140757507 0.3514568556411696 1.0 ['ENST00000377452.3_1_20:18744044-18744080:+|nuORF'] 100708 11846 SLDRKVKVY True H1975_Epitope_Rep3 1106.64479349906 1106.64368993586 50.714 2 -1.1205535693534057 0.35147788592787255 1.0 ['ENST00000512550.1_1_5:72868339-72873863:+|nuORF', 'nc|ENSG00000164338|Q8TED0-2|UTP15', 'nc|ENSG00000164338|Q8TED0-3|UTP15', 'ENSG00000164338|ENST00000296792|UTP15'] 128466 8105 VPSGLEPFG True NCI_RA007_Epitope_Rep2 901.4545331178899 901.4539849679301 36.159 1 -1.1205735900643314 0.3514861589488455 1.0 ['ENST00000255194.10_2_5:77590392-77590476:-|nuORF'] 42448 11139 IEDVREFLG True PC9_epitope_Rep5 1076.55022440788 1076.54912993586 47.831 2 -1.1206197485905403 0.35151994489163296 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 44326 8272 ILDLYIPPP True NCI_RA007_Epitope_Rep5 1039.5953836951498 1039.5942899358602 38.496 2 -1.120668928520136 0.35156648637616084 1.0 ['ENSG00000153721|ENST00000607772|CNKSR3', 'nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF'] 131410 21319 VTHRLAIDKR True NCI_RA007_Epitope_Rep2 1207.71493874755 1207.71384993586 88.205 2 -1.1207182588603826 0.3515702732351966 1.0 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 34430 22508 GPKAKKSGSK True PC9_epitope_Rep3 986.5872786229398 986.58618993586 91.854 2 -1.1207565760372313 0.3515702732351966 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7'] 12923 6153 DLKKYHFYYWF True NCI_RA007_Epitope_Rep1 1608.7765359446 1608.77488490379 27.971 3 -1.1208207136151054 0.3515861171698619 1.0 ['ENSG00000197548|ENST00000693202|ATG7', 'nc|ENSG00000197548|O95352-2|ATG7'] 33687 14885 GLGVCPQD True NCI_RA007_Epitope_Rep5 787.35343917763 787.35234993586 63.924 2 -1.1208285998933083 0.3515861171698619 1.0 ['ENST00000595692.1_1_19:7679981-7682940:+|nuORF'] 92869 20159 RPFNLKFY True PC9_epitope_Rep3 1083.58655034695 1083.5854499358602 82.796 2 -1.1208494007294092 0.3515861171698619 1.0 ['ENSG00000153976|ENST00000284110|HS3ST3A1', 'ENSG00000125430|ENST00000360954|HS3ST3B1'] 109427 14987 TDFWKRVWMVV True H1975_Epitope_Rep1 1465.75402667821 1465.75292993586 62.892 2 -1.1208561543739155 0.3515861171698619 1.0 ['ENST00000551739.5_1_12:56332068-56333318:+|nuORF', 'ENST00000552478.5_1_12:56331951-56332941:+|nuORF'] 47499 18638 IVQMYNDPK True PC9_epitope_Rep5 1106.5430308524599 1106.54192993586 76.716 2 -1.1208703280774388 0.3515861171698619 1.0 ['ENSG00000186094|ENST00000371839|AGBL4', 'nc|ENSG00000186094|Q5VU57-2|AGBL4'] 118708 8994 TYTFSLEGSG True PC9_epitope_Rep2 1060.47130538084 1060.47020993586 39.947 2 -1.1209262094739159 0.35160644363098353 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2', 'RIN2|p.P358Tfs*9|1|0.44|ENSG00000132669|chr20:19974942-19974943|-/A|frameshift_variant'] 3708 14951 AGRVRPRG True NCI_RA007_Epitope_Rep4 867.5151167421898 867.51400993586 64.974 2 -1.1209751574038194 0.35160644363098353 1.0 ['ENST00000459719.6_1_Y:21729415-21749099:+|nuORF'] 23278 11797 EVPSPRILP True PC9_epitope_Rep3 1006.5811306133398 1006.58002993586 50.393 2 -1.1210117939165896 0.35160644363098353 1.0 ['ENST00000568237.1_2_16:69496430-69496577:+|nuORF'] 117248 16004 TVLTAEEKQL True PC9_epitope_Rep5 1130.6183039677 1130.61720993586 66.55 2 -1.1210487027934333 0.35160644363098353 1.0 ['PUS7|p.R178L|1|0.19|ENSG00000091127|chr7:105506007-105506007|C/A|missense_variant'] 121610 7804 VFGAGFQEK True NCI_RA007_Epitope_Rep4 981.4919812557698 981.49088993586 36.703 2 -1.1210965548227274 0.3516147135350237 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 28353 3568 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 18.846 2 -1.121172386135632 0.3516867546712582 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 36377 21111 GVFGDVQL True H1975_Epitope_Rep3 833.42831837005 833.4277649679301 88.18 1 -1.1211731416449064 0.3516950233400505 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ENST00000504142.2_2_5:89924394-89949789:+|nuORF'] 83896 18654 PVPSLHPSTL True PC9_epitope_Rep6 1046.5760452329002 1046.57494993586 84.396 2 -1.121224542780592 0.3517287997245144 1.0 ['ENST00000493195.5_1_1:159898873-159900045:-|nuORF'] 70749 14043 LWWRKKHPFDK True NCI_RA007_Epitope_Rep2 1539.8462872702696 1539.8451899358602 59.283 2 -1.1213089025946692 0.3517498214467911 1.0 ['nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 67752 10093 LSYKHTDSGYS True NCI_RA007_Epitope_Rep3 1256.567331024 1256.56622993586 46.791 2 -1.1213161547487502 0.351770842632861 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000450801.1_1_X:138811061-138819898:-|nuORF'] 59928 3951 LGGPRGPK True NCI_RA007_Epitope_Rep4 780.4606215578399 780.45952993586 21.434 2 -1.1214471860331345 0.3518428771840327 1.0 ['ENSG00000118160|ENST00000236877|SLC8A2'] 3802 6324 AGVALHSSV True NCI_RA007_Epitope_Rep4 839.4501164437901 839.44900993586 30.928 2 -1.1215499791595775 0.35192766321051894 1.0 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG833|P61570|ERVK-25_env', 'HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|121|2|sense', 'nc|ENSG849|O42043|ERVK-18_env'] 122364 5836 VGDHISAVN True PC9_epitope_Rep5 910.45084471978 910.44974993586 27.44 2 -1.12157560517747 0.35196143447431516 1.0 ['ENSG00000081026|ENST00000307546|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-1|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-3|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-2|MAGI3'] 9371 6521 AVSGLSHV True PC9_epitope_Rep1 768.41300265908 768.41190993586 29.886 2 -1.1215777771237738 0.3519652102940801 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 26820 22972 FLAPRIHQL True PC9_epitope_Rep3 1093.63964854897 1093.63854993586 93.627 2 -1.1216119208816289 0.3519652102940801 1.0 ['ENST00000550078.2_2_1:203798716-203798749:+|nuORF'] 135210 10555 WETYLKWWCR True PC9_epitope_Rep1 1469.6914264216498 1469.69032993586 45.491 2 -1.1216462185791851 0.35196898592124054 1.0 ['nc|ENSG00000186074|Q8TDQ1-5|CD300LF', 'ENST00000583544.1_1_17:72700560-72709059:-|nuORF', 'nc|ENSG00000186074|Q8TDQ1-3|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-4|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-2|CD300LF', 'ENSG00000186074|ENST00000326165|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-6|CD300LF'] 35978 6277 GTVFIFWGPS True H1975_Epitope_Rep3 1109.5545815123298 1109.5534899358602 29.152 2 -1.121656145818805 0.35196898592124054 1.0 ['ENSG00000117069|ENST00000477717|ST6GALNAC5'] 126998 11861 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8455299358602 50.117 2 -1.1217003390512854 0.3519772498310315 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 57250 11079 LDWTELKRPNE True H1975_Epitope_Rep3 1399.7095785835897 1399.7084899358601 47.709 2 -1.1217051693761537 0.35198551353005686 1.0 ['ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 91735 18922 RKEKAKIHYWK True NCI_RA007_Epitope_Rep4 1485.8568519539697 1485.85519490379 81.821 3 -1.121712416801317 0.3519937770183246 1.0 ['nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 65134 10426 LQNRRLFQSLH True H1975_Epitope_Rep1 1410.7844152896998 1410.7833099358602 45.057 2 -1.121783909591575 0.35199755167620916 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 62652 8012 LLLGGAYI True PC9_epitope_Rep1 818.49019035062 818.48908993586 35.638 2 -1.1217870407774413 0.35199755167620916 1.0 ['nc|ENSG00000100095|Q9BYH1-2|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-3|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-5|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-4|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-7|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-6|SEZ6L', 'ENSG00000100095|ENST00000248933|SEZ6L'] 117555 7123 TVSHQKGKPVP True NCI_RA007_Epitope_Rep2 1176.6615061923599 1176.6604099358601 32.328 2 -1.1218239181517693 0.3520140775027734 1.0 ['ENSG00000188641|ENST00000370192|DPYD'] 84424 11555 QADVDHDFV True H1975_Epitope_Rep2 1044.4512386426 1044.45014993586 49.508 2 -1.121826823634244 0.3520140775027734 1.0 ['nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP'] 63127 12420 LLRGLWQRWRR True NCI_RA007_Epitope_Rep1 1538.9058678350598 1538.90476993586 52.286 2 -1.1218896283164217 0.3520322300984242 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 23580 6583 EVYMYTHYY True H1975_Epitope_Rep2 1267.52196105471 1267.52032490379 30.232 3 -1.1219098460235097 0.3520322300984242 1.0 ['ENST00000562757.5_1_16:66857380-66864856:-|nuORF'] 94236 13327 RRQEWERQYRK True H1975_Epitope_Rep3 1633.8549544610098 1633.8538499358601 56.522 2 -1.121918484554009 0.3520322300984242 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 60240 8582 LGQPYFEAFK True H1975_Epitope_Rep1 1198.60225998074 1198.60116993586 37.937 2 -1.1219546306936774 0.3520322300984242 1.0 ['nc|ENSG00000163608|Q6NW34-2|NEPRO', 'ENSG00000163608|ENST00000314400|NEPRO', 'ENST00000472637.5_1_3:112724385-112732818:-|nuORF'] 65145 14718 LQNRRLFQSLH True PC9_epitope_Rep4 1410.7844152896998 1410.7833099358602 64.548 2 -1.121954733598484 0.3520322300984242 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 72096 25591 MFFRVVGK True PC9_epitope_Rep2 982.5422430068198 982.54114993586 104.12 2 -1.1219650619873662 0.3520322300984242 1.0 ['ENST00000502660.5_1_5:149456698-149465990:-|nuORF'] 42950 7512 IESLRVPG True PC9_epitope_Rep1 869.49706663621 869.49596993586 33.714 2 -1.121975169699574 0.3520322300984242 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'ENST00000477935.1_1_7:92861780-92886786:+|nuORF', 'ENST00000485994.5_1_7:92861780-92886786:+|nuORF', 'nc|ENSG00000004766|Q96JG6-2|VPS50'] 92253 26463 RLKQKIKVLKK True NCI_RA007_Epitope_Rep1 1380.9656741269598 1380.96403490379 109.53 3 -1.121996953522679 0.3520322300984242 1.0 ['ENST00000481507.5_1_9:37326993-37357262:+|nuORF', 'ENSG00000147905|ENST00000336755|ZCCHC7'] 10370 12070 CGHGGVVV True NCI_RA007_Epitope_Rep2 726.34829422754 726.34774496793 51.541 1 -1.1220099200065352 0.3520322300984242 1.0 ['ENST00000467101.5_1_20:60776202-60776382:+|nuORF'] 91316 15931 RGRGKGPA True NCI_RA007_Epitope_Rep4 797.4620185401699 797.46147496793 69.147 1 -1.1220252789379435 0.3520322300984242 1.0 ['ENSG00000117318|ENST00000374561|ID3'] 102006 11850 SLQQEHDI True PC9_epitope_Rep5 968.45632402304 968.45522993586 50.58 2 -1.1220286488991567 0.3520322300984242 1.0 ['ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 127907 15311 VPGRWAWRCF True PC9_epitope_Rep4 1276.6287665954399 1276.62712490379 66.827 3 -1.1220301772297419 0.3520322300984242 1.0 ['ENST00000442820.5_1_1:163291810-163292704:+|nuORF', 'ENST00000524800.5_1_1:163291810-163295872:+|nuORF'] 57594 10091 LEDWRLMHEGA True NCI_RA007_Epitope_Rep1 1355.62922008791 1355.6281299358602 43.261 2 -1.122088945460169 0.3520322300984242 1.0 ['ENST00000496522.5_1_9:90113545-90113932:+|nuORF'] 77719 15497 NTLERREKHEK True PC9_epitope_Rep4 1438.7640737679396 1438.7629699358602 67.535 2 -1.122149253919782 0.35204426369535563 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 32453 6237 GFYLHRGRCFD True PC9_epitope_Rep5 1369.6349741746897 1369.63333490379 28.97 3 -1.1221545819349619 0.35204426369535563 1.0 ['ENSG00000147655|ENST00000276659|RSPO2', 'nc|ENSG00000147655|Q6UXX9-2|RSPO2', 'nc|ENSG00000147655|Q6UXX9-3|RSPO2'] 115747 12674 TSDAVVMP True PC9_epitope_Rep1 818.3844049527399 818.38330993586 53.621 2 -1.1221947854085756 0.35204426369535563 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 69300 7236 LTTVKEKA True PC9_epitope_Rep1 888.5280324113198 888.52692993586 32.647 2 -1.122273056940049 0.35207802141764405 1.0 ['ENSG00000170929|ENST00000641627|OR1M1'] 57224 5942 LDVYFEYEEK True NCI_RA007_Epitope_Rep1 1333.6077988536497 1333.6067099358602 27.16 2 -1.1223699014071553 0.3521582825527141 1.0 ['ENST00000555259.5_1_14:31112578-31185169:+|nuORF', 'nc|ENSG00000092108|Q8WVM8-2|SCFD1', 'nc|ENSG00000092108|Q8WVM8-3|SCFD1', 'ENSG00000092108|ENST00000458591|SCFD1'] 62547 9362 LLKHRFSP True H1975_Epitope_Rep3 996.5868847001199 996.58578993586 41.011 2 -1.1224242233948003 0.3521582825527141 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'ENST00000486209.5_1_22:21827645-21829738:-|nuORF', 'ENST00000492581.5_1_22:21062337-21064665:-|nuORF', 'ENST00000477296.5_1_22:21827645-21830331:-|nuORF'] 75560 20917 NLAKKLEEI True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 85.512 2 -1.1224488365432916 0.35216205190964256 1.0 ['ENST00000603395.1_1_7:56671114-56671243:+|nuORF', 'ENSG00000243317|ENST00000507606|STMP1'] 139881 8461 YPSDFLDALH True NCI_RA007_Epitope_Rep5 1176.54513902744 1176.5440499358601 39.226 2 -1.1224750982953897 0.35216205190964256 1.0 ['nc|ENSG00000113073|Q96Q91-4|SLC4A9', 'nc|ENSG00000113073|Q96Q91-2|SLC4A9', 'ENSG00000113073|ENST00000506757|SLC4A9', 'nc|ENSG00000113073|Q96Q91|SLC4A9'] 65137 10835 LQNRRLFQSLH True NCI_RA007_Epitope_Rep1 1410.7844152896998 1410.7833099358602 46.14 2 -1.1226237437590414 0.3522213015488559 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 91677 6786 RIWQYQQQEWK True H1975_Epitope_Rep1 1591.78956023979 1591.78792490379 31.146 3 -1.122782589342735 0.35222506915497087 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3'] 66570 13706 LSIHQMVFAL True PC9_epitope_Rep5 1157.6267009067699 1157.6256099358602 57.747 2 -1.1228124332384508 0.35222506915497087 1.0 ['ENST00000604679.5_1_10:74619033-74620213:+|nuORF'] 95348 20949 RVTHWGGG True H1975_Epitope_Rep1 868.4303840587199 868.42928993586 87.026 2 -1.1228804370239365 0.3522333265347746 1.0 ['ENST00000481635.1_1_14:105935922-105936549:+|nuORF'] 15877 13902 EDIFWPCTL True PC9_epitope_Rep3 1122.50558271458 1122.5044899358602 58.556 2 -1.1229570156123658 0.3522543308391439 1.0 ['ENST00000441302.6_1_3:39139484-39139703:-|nuORF'] 69498 13540 LVASEGLFHSH True PC9_epitope_Rep1 1195.59857158263 1195.59746993586 56.938 2 -1.1230343853621172 0.3522746102762163 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.D1231Tfs*9|1|0.27|ENSG00000163554|chr1:158648532-158648532|C/-|frameshift_variant', 'SPTA1|p.D1280Gfs*3|1|0.07|ENSG00000163554|chr1:158647598-158647599|-/T|frameshift_variant', 'SPTA1|p.T1344Pfs*5|1|0.22|ENSG00000163554|chr1:158645353-158645353|G/-|frameshift_variant', 'SPTA1|p.D1530Rfs*4|1|0.28|ENSG00000163554|chr1:158642831-158642832|-/T|frameshift_variant', 'SPTA1|p.K1686Lfs*14|1|0.06|ENSG00000163554|chr1:158638166-158638167|-/GAAGATAG|frameshift_variant', 'SPTA1|p.W1920*|1|0.3|ENSG00000163554|chr1:158626912-158626912|C/-|frameshift_variant', 'SPTA1|p.T573Lfs*6|1|0.26|ENSG00000163554|chr1:158669525-158669525|G/-|frameshift_variant', 'SPTA1|p.Q902Sfs*21|1|0.18|ENSG00000163554|chr1:158657578-158657578|G/-|frameshift_variant'] 31129 8761 GAVQQYIRTI True NCI_RA007_Epitope_Rep4 1147.6349570913499 1147.63386993586 40.497 2 -1.1230998291125525 0.3522746102762163 1.0 ['VPS11|p.S379Dfs*2|1|0.05|ENSG00000160695|chr11:119081555-119081556|-/GACTGACC|frameshift_variant', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENSG00000160695|ENST00000621676|VPS11'] 141116 21504 YSRILNYLF True PC9_epitope_Rep5 1187.63389446219 1187.63278993586 87.75 2 -1.1231016431882688 0.3522746102762163 1.0 ['ENST00000482131.1_1_1:35827333-35836274:+|nuORF'] 12220 4117 DIHVTVQPK True NCI_RA007_Epitope_Rep4 1035.5712942056298 1035.57018993586 22.119 2 -1.1231398559623667 0.3522746102762163 1.0 ['ENSG00000213965|ENST00000397061|NUDT19'] 36772 13015 GVKRRRLI True NCI_RA007_Epitope_Rep4 996.6668663563198 996.66576993586 57.165 2 -1.1231682720846867 0.3522828663930456 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 102301 6892 SLSPEELSSVP True PC9_epitope_Rep5 1143.56593404167 1143.5648299358602 31.479 2 -1.1233823170251624 0.35235412577429964 1.0 ['nc|ENSG00000102854|Q13421-4|MSLN', 'ENSG00000102854|ENST00000545450|MSLN', 'nc|ENSG00000102854|Q13421|MSLN', 'nc|ENSG00000102854|Q13421-2|MSLN'] 59849 6725 LGFNTLGT True PC9_epitope_Rep5 821.42831837005 821.4272299358599 30.838 2 -1.1234107289024264 0.35235412577429964 1.0 ['ENST00000371142.8_1_10:98281879-98281930:-|nuORF'] 16044 19961 EDVYTFKTP True PC9_epitope_Rep5 1098.5233409537 1098.5222499358601 81.833 2 -1.1234268473019158 0.35235412577429964 1.0 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 115959 9556 TSHTLHLSHL True PC9_epitope_Rep5 1144.5989059358 1144.5978099358601 41.716 2 -1.1234538856820677 0.35235412577429964 1.0 ['nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENSG00000158941|ENST00000308511|CCAR2'] 64976 19208 LQFLQGRTL True PC9_epitope_Rep5 1074.61857875122 1074.61748993586 78.923 2 -1.1234898130723918 0.35236990683506875 1.0 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 80793 20898 PHLIYRQD True PC9_epitope_Rep1 1040.54032843052 1040.53922993586 85.205 2 -1.1235151041239326 0.35236990683506875 1.0 ['ADAMTS20|p.G983Efs*12|1|0.33|ENSG00000173157|chr12:43432452-43432452|C/-|frameshift_variant', 'nc|ENSG00000173157|P59510-2|ADAMTS20', 'ADAMTS20|p.W1663*|1|0.33|ENSG00000173157|chr12:43377371-43377372|CC/-|frameshift_variant', 'nc|ENSG00000173157|P59510|ADAMTS20', 'ENSG00000173157|ENST00000389420|ADAMTS20'] 131094 8181 VTEADLFHTIE True H1975_Epitope_Rep1 1273.6190322436898 1273.61792993586 36.408 2 -1.1235165992660703 0.35236990683506875 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 28271 11616 FRNDWLTPAP True NCI_RA007_Epitope_Rep2 1215.60365696307 1215.60254993586 49.775 2 -1.1235195063440915 0.35236990683506875 1.0 ['nc|ENSG00000123572|Q7Z2Y5-2|NRK', 'ENSG00000123572|ENST00000243300|NRK'] 32196 12713 GEWGSHSV True H1975_Epitope_Rep2 857.3667807426499 857.36568993586 54.001 2 -1.1235262918095403 0.35236990683506875 1.0 ['ENSG00000164659|ENST00000450689|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-3|ELAPOR2'] 38179 3301 HDPHVRHTWK True NCI_RA007_Epitope_Rep1 1311.65848650059 1311.65738993586 16.738 2 -1.1235636177621142 0.3523729418361625 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4'] 102853 11769 SNYSVSLVGP True NCI_RA007_Epitope_Rep1 1021.5080252427299 1021.50692993586 49.756 2 -1.1236016916969793 0.3523729418361625 1.0 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF', 'ENST00000509333.5_1_4:95376439-95494553:+|nuORF', 'ENST00000514830.5_1_4:95376439-95503710:+|nuORF', 'nc|ENSG00000163110|Q96HC4-5|PDLIM5', 'ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 41244 6314 HVLPDDSH True NCI_RA007_Epitope_Rep1 918.4195445915 918.4184499358599 28.585 2 -1.123608876529485 0.3523729418361625 1.0 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'ENST00000464395.1_1_10:3190209-3190503:-|nuORF'] 76074 2357 NMFEFLKSMR True PC9_epitope_Rep1 1301.6260492837698 1301.62441490379 12.94 3 -1.1236102520192073 0.3523729418361625 1.0 ['CYP8B1|p.R59S|1|0.38|ENSG00000180432|chr3:42875642-42875642|G/T|missense_variant'] 123659 16253 VGQPGIGF True PC9_epitope_Rep3 773.40718900265 773.40608993586 67.655 2 -1.123617053239218 0.3523729418361625 1.0 ['ENSG00000187498|ENST00000375820|COL4A1', 'COL4A1|p.G1320Vfs*51|1|0.18|ENSG00000187498|chr13:110166296-110166296|T/-|frameshift_variant'] 126335 24448 VLILILCLKV True PC9_epitope_Rep4 1125.75592417117 1125.75537496793 102.52 1 -1.1236415189641755 0.3523804669181364 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 126333 25387 VLILILCLKV True PC9_epitope_Rep1 1125.75592417117 1125.75537496793 102.61 1 -1.1236442766766994 0.3523804669181364 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 67609 17292 LSVLKLACA True PC9_epitope_Rep5 916.5415743004799 916.54046993586 71.519 2 -1.1236624030910505 0.3523804669181364 1.0 ['ENST00000463814.1_1_7:143815556-143816108:-|nuORF', 'OR2A2|p.T191I|1|0.31|ENSG00000221989|chr7:144110154-144110154|C/T|missense_variant', 'OR2A2|p.I180F|1|0.35|ENSG00000221989|chr7:144110120-144110120|A/T|missense_variant', 'ENSG00000221938|ENST00000641068|OR2A14', 'ENSG00000221836|ENST00000641693|OR2A5', 'ENSG00000221989|ENST00000408979|OR2A2'] 139734 14963 YNVEAVQLL True PC9_epitope_Rep3 1047.5600608155898 1047.5589699358602 62.686 2 -1.1236673051604316 0.3523804669181364 1.0 ['CNOT1|p.E1729Q|1|0.08|ENSG00000125107|chr16:58538217-58538217|C/G|missense_variant'] 5207 11036 ALPAMVPPALW True NCI_RA007_Epitope_Rep3 1164.6365373144797 1164.6349049037901 50.508 3 -1.12370171075203 0.35240146292355334 1.0 ['ENST00000317683.3_1_19:46216640-46216787:-|nuORF'] 28425 17289 FSAWLHCVCV True PC9_epitope_Rep6 1163.5256069665102 1163.5245099358601 79.108 2 -1.1237936526628485 0.35244794454214134 1.0 ['ENSG00000174839|ENST00000311128|DENND6A'] 123975 10583 VGSARALR True NCI_RA007_Epitope_Rep3 828.49298431528 828.49188993586 48.678 2 -1.1238157745090827 0.352456196240841 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 2211 6105 AEMLDDLMEKR True NCI_RA007_Epitope_Rep1 1349.6319225098498 1349.6308299358602 27.785 2 -1.1238569588255485 0.35246444772924207 1.0 ['ENST00000469238.1_1_1:33480014-33487286:-|nuORF', 'nc|ENSG00000004455|P54819-4|AK2', 'ENST00000427762.1_1_1:59096724-59097153:-|nuORF', 'nc|ENSG00000004455|P54819-6|AK2', 'nc|ENSG00000004455|P54819-3|AK2', 'nc|ENSG00000004455|P54819-5|AK2', 'nc|ENSG00000004455|P54819-2|AK2', 'ENSG00000004455|ENST00000672715|AK2'] 14304 5206 DSYCWAAVQR True NCI_RA007_Epitope_Rep1 1197.5236923902098 1197.5225899358602 24.333 2 -1.1239281818261868 0.35247269900735245 1.0 ['PANX1|p.Q90R|1|0.19|ENSG00000110218|chr11:94153578-94153578|A/G|missense_variant'] 22479 13091 ETFIRLC[Carbamidomethyl]ERFN True H1975_Epitope_Rep3 1483.7241833813398 1483.7230899358601 55.597 2 -1.1240055402991687 0.3525446621983231 1.0 ['nc|ENSG00000111880|O60942-2|RNGTT', 'ENSG00000111880|ENST00000369485|RNGTT', 'nc|ENSG00000111880|O60942-3|RNGTT', 'nc|ENSG00000111880|O60942-4|RNGTT'] 30371 9139 GADKKFARKP True H1975_Epitope_Rep1 1116.6403768249597 1116.63926993586 40.059 2 -1.1240425836739898 0.3525529122440398 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 65927 7653 LSDRSPSLI True NCI_RA007_Epitope_Rep3 986.53965972418 986.53856993586 37.226 2 -1.1240963436209106 0.3525694117047438 1.0 ['ENST00000379731.4_1_9:33113141-33113378:-|nuORF'] 27264 21458 FLPVKLIFV True PC9_epitope_Rep4 1074.6841391299 1074.68304993586 90.728 2 -1.1241328175746168 0.3525694117047438 1.0 ['ENSG00000072954|ENST00000187762|TMEM38A'] 141969 9595 YVIHTLAASL True NCI_RA007_Epitope_Rep3 1086.60734536118 1086.6062499358602 44.828 2 -1.124290361478226 0.35265411177085193 1.0 ['DMXL1|p.M2231I|1|0.11|ENSG00000172869|chr5:119175272-119175272|G/A|missense_variant'] 4396 13131 AINTENIRL True PC9_epitope_Rep6 1042.57710786206 1042.5760099358602 62.141 2 -1.1242907251396788 0.3526578665715305 1.0 ['nc|ENSG00000120063|Q14344-2|GNA13', 'ENSG00000120063|ENST00000439174|GNA13'] 111564 13754 TIARSLPTTV True PC9_epitope_Rep2 1057.61315901761 1057.61206993586 58.191 2 -1.1243251058372505 0.3526578665715305 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 18759 10162 ELCLICRY True H1975_Epitope_Rep2 1011.48815882863 1011.48706993586 44.089 2 -1.1243542309076506 0.35266162118084754 1.0 ['ENST00000562985.5_1_16:71901919-71918510:-|nuORF', 'ENST00000568961.5_1_16:71901919-71917908:-|nuORF'] 72218 12518 MHCMWWERWMK True H1975_Epitope_Rep3 1622.67672204098 1622.6756299358601 53.348 2 -1.1243664158530329 0.35266162118084754 1.0 ['ENST00000301180.9_1_12:51133363-51135252:+|nuORF'] 87172 12880 QPGAHTPSALP True PC9_epitope_Rep1 1074.54580773378 1074.54470993586 54.416 2 -1.1244584809387939 0.35266986889548585 1.0 ['ENST00000373084.8_1_9:130712821-130712983:-|nuORF'] 39862 12906 HPAEWRLALEK True H1975_Epitope_Rep3 1348.7251690780797 1348.7240699358601 54.87 2 -1.1245313768319238 0.3527118449719069 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 23024 7970 EVFYTALW True H1975_Epitope_Rep3 1027.5014833103098 1027.50038993586 35.628 2 -1.1245557086653604 0.3527118449719069 1.0 ['nc|ENSG00000142197|Q9Y3R5-2|DOP1B', 'ENSG00000142197|ENST00000691173|DOP1B'] 63494 13739 LLWYFVIVF True PC9_epitope_Rep1 1198.67905374946 1198.67740490379 57.693 3 -1.1245807520225037 0.35273283220792456 1.0 ['SSMEM1|p.C201Lfs*36|1|0.24|ENSG00000165120|chr7:130216335-130216336|-/T|frameshift_variant', 'ENSG00000165120|ENST00000297819|SSMEM1'] 68230 21428 LTEAGSPVKL True PC9_epitope_Rep2 1013.5757108797299 1013.5746099358599 87.895 2 -1.1245996317667895 0.35274107859499815 1.0 ['nc|ENSG00000124256|Q9H171-4|ZBP1', 'ENSG00000124256|ENST00000371173|ZBP1', 'nc|ENSG00000124256|Q9H171-5|ZBP1', 'ENST00000480037.1_1_20:56191111-56195351:-|nuORF', 'ENST00000432548.2_1_20:56190212-56195528:-|nuORF', 'ENST00000461547.5_1_20:56191111-56191654:-|nuORF', 'nc|ENSG00000124256|Q9H171-6|ZBP1', 'nc|ENSG00000124256|Q9H171-3|ZBP1', 'nc|ENSG00000124256|Q9H171-2|ZBP1'] 68467 4732 LTFFQEWID True NCI_RA007_Epitope_Rep2 1197.57062549929 1197.56896490379 23.036 3 -1.1246297050548306 0.3527748050756765 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 36474 15291 GVGGRKPH True NCI_RA007_Epitope_Rep4 806.4511195032999 806.45057496793 66.471 1 -1.1246503792327311 0.3527957907074516 1.0 ['ENST00000520083.1_1_9:36923038-36923170:-|nuORF'] 35280 7134 GRGGVERAP True PC9_epitope_Rep3 897.4780625271299 897.47696993586 32.448 2 -1.1246876669297707 0.3528205258866694 1.0 ['ENST00000533093.5_1_8:144922116-144922908:-|nuORF'] 32377 24627 GFLMLLYVIL True PC9_epitope_Rep4 1180.69298956144 1180.6918899358602 103.22 2 -1.1247163624283987 0.3528205258866694 1.0 ['ENST00000555826.5_1_14:45369638-45373733:+|nuORF', 'ENSG00000179476|ENST00000325192|C14orf28'] 125092 18641 VIEKHVFVVE True NCI_RA007_Epitope_Rep5 1197.6757592741699 1197.67411490379 78.516 3 -1.1247437391061927 0.3528205258866694 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 61970 13716 LLDNVRKV True PC9_epitope_Rep4 955.58146496651 955.58036993586 60.646 2 -1.1247662808169165 0.35282427577772685 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF', 'GK|p.H427Qfs*69|1|0.06|ENSG00000198814|chrX:30720657-30720658|-/TCAG|frameshift_variant', 'nc|ENSG00000198814|P32189-1|GK', 'nc|ENSG00000198814|P32189-4|GK', 'nc|ENSG00000198814|P32189-2|GK', 'ENSG00000198814|ENST00000427190|GK', 'ENST00000479048.5_1_X:30695568-30713238:+|nuORF', 'ENST00000328462.7_1_X:101035000-101035489:-|nuORF', 'ENSG00000229894|ENST00000505354|GK3'] 57284 16114 LDYYWWLLFPV True NCI_RA007_Epitope_Rep2 1513.76457427857 1513.76346993586 67.404 2 -1.1247719958542053 0.35282427577772685 1.0 ['ENSG00000132874|ENST00000255226|SLC14A2', 'SLC14A2|p.T722Hfs*38|1|0.14|ENSG00000132874|chr18:45669428-45669429|-/C|frameshift_variant'] 13332 7638 DLVGAAHPGQS True PC9_epitope_Rep4 1050.50942222506 1050.50832993586 36.761 2 -1.1247859084451723 0.35282802547770703 1.0 ['ENST00000372577.2_1_9:131735455-131741548:+|nuORF'] 59998 14080 LGIRDIFT True PC9_epitope_Rep1 933.52836676449 933.52726993586 58.992 2 -1.1248189165972853 0.35282802547770703 1.0 ['CON__Q9N2I2'] 2001 7092 AEIQHITYQHW True H1975_Epitope_Rep3 1424.68369818892 1424.68260993586 32.247 2 -1.1248633854572956 0.35283626960166115 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 86812 21160 QLPLRVLIV True PC9_epitope_Rep3 1049.6961007959299 1049.69500993586 86.677 2 -1.1248954303813772 0.3528467711119603 1.0 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000470184.1_1_7:100179334-100179876:-|nuORF'] 67219 10750 LSRKNNIP True PC9_epitope_Rep2 940.54541381096 940.54430993586 46.669 2 -1.1249052398425907 0.3528467711119603 1.0 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 120756 23156 VEKRMLLKF True PC9_epitope_Rep5 1162.6896355164997 1162.68852993586 94.058 2 -1.1249347521190884 0.3528467711119603 1.0 ['CHML|p.M298L|1|0.16|ENSG00000203668|chr1:241634875-241634875|T/A|missense_variant'] 64335 20205 LPLDDGAAHV True PC9_epitope_Rep4 1006.5083595958998 1006.50726993586 85.856 2 -1.1249561108943764 0.3528467711119603 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121878388-121880774:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 27084 17390 FLGLSGLVG True PC9_epitope_Rep4 861.4960040070499 861.49490993586 74.892 2 -1.1249573974288154 0.3528467711119603 1.0 ['HEPHL1|p.R319Gfs*17|1|0.24|ENSG00000181333|chr11:94067642-94067642|C/-|frameshift_variant', 'ENSG00000181333|ENST00000315765|HEPHL1'] 54361 19907 KYERINWVWDW True H1975_Epitope_Rep2 1593.7728475464899 1593.77174993586 82.558 2 -1.1249734712617392 0.3528467711119603 1.0 ['DNAH7|p.R1176W|1|0.29|ENSG00000118997|chr2:195926512-195926512|T/A|missense_variant'] 138422 13350 YHIFFYIL True NCI_RA007_Epitope_Rep5 1114.5851533646198 1114.58404993586 58.037 2 -1.1249903236447998 0.3528467711119603 1.0 ['ENST00000477342.1_1_7:92116773-92118803:-|nuORF'] 32943 18948 GIATDLKIPI True PC9_epitope_Rep4 1039.62774645259 1039.62664993586 80.971 2 -1.1250185348282211 0.3528467711119603 1.0 ['ENST00000600228.5_1_19:52633831-52643082:-|nuORF'] 42361 12028 IEARRRAH True PC9_epitope_Rep5 1007.5736942474698 1007.57258993586 51.26 2 -1.1250539840636233 0.3528467711119603 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 46967 8139 ITPPRYRA True H1975_Epitope_Rep2 972.5504991914 972.54940993586 36.256 2 -1.1251105725998303 0.3528677510157812 1.0 ['ENSG00000169174|ENST00000302118|PCSK9'] 111571 9195 TICNLYTMPRI True PC9_epitope_Rep1 1323.6679140957501 1323.66625490379 40.219 3 -1.1251555380656906 0.3528759934787039 1.0 ['nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.I925Nfs*6|1|0.23|ENSG00000217128|chr5:131671670-131671671|-/T|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 49915 23524 KIILEFKEKCK True PC9_epitope_Rep3 1377.80539354473 1377.80374490379 95.765 3 -1.1252495527268878 0.3529179509386861 1.0 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 53575 23580 KRRDHRKTAK True PC9_epitope_Rep5 1294.7694339318998 1294.76832993586 95.687 2 -1.1252523852256353 0.3529179509386861 1.0 ['ENST00000397861.6_1_17:54910299-54910416:-|nuORF'] 96955 10838 SAVVVQLSV True PC9_epitope_Rep6 900.5280324113199 900.52692993586 52.546 2 -1.1253250752851374 0.35293293599246073 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 41910 8809 IDARLKALQEY True NCI_RA007_Epitope_Rep2 1318.7245003717399 1318.72285490379 38.913 3 -1.1253681867907936 0.35293293599246073 1.0 ['nc|ENSG00000104983|Q9Y6R9-2|CCDC61', 'ENSG00000104983|ENST00000595358|CCDC61'] 66263 7433 LSFEYVWE True PC9_epitope_Rep4 1071.49131254943 1071.49020993586 35.941 2 -1.1253867701120708 0.35293293599246073 1.0 ['ENSG00000164715|ENST00000297293|LMTK2'] 46513 12875 ISWWIFMHPPQ True NCI_RA007_Epitope_Rep1 1440.7012628293598 1440.70016993586 54.073 2 -1.1254423668204505 0.35293293599246073 1.0 ['ENST00000483977.5_1_21:35497749-35514781:+|nuORF'] 57193 19956 LDVLKSLNFRI True PC9_epitope_Rep3 1316.78162132504 1316.7805299358602 82.005 2 -1.1254875069662913 0.35293293599246073 1.0 ['ENSG00000176563|ENST00000588408|CNTD1'] 26106 15368 FGQRMLEKMGW True PC9_epitope_Rep4 1381.6634974216497 1381.6623899358601 67.046 2 -1.1255026421555907 0.35293293599246073 1.0 ['nc|ENSG00000171056|Q9BT81-2|SOX7', 'nc|ENSG00000258724|Q96BK5-2|PINX1', 'ENST00000524026.1_1_8:10692103-10697380:-|nuORF', 'ENST00000520018.2_1_8:10691012-10697347:-|nuORF', 'ENSG00000254093|ENST00000314787|PINX1'] 73648 4171 MYDLRWDRWTA True NCI_RA007_Epitope_Rep1 1511.6979683540699 1511.6963249037901 20.308 3 -1.125524290117205 0.35293293599246073 1.0 ['KLHL34|p.R450W|1|0.8|ENSG00000185915|chrX:21656441-21656441|G/A|missense_variant'] 9292 11417 AVQEVHPSPV True H1975_Epitope_Rep3 1061.55055876105 1061.54946993586 49.032 2 -1.1255324131036109 0.35293293599246073 1.0 ['nc|ENSG00000118922|Q9Y4X4-3|KLF12', 'ENSG00000118922|ENST00000703967|KLF12'] 116684 7471 TVCQHTLEMER True PC9_epitope_Rep5 1345.6118557716097 1345.6107499358602 33.69 2 -1.1255612284981464 0.35294117647058826 1.0 ['STAB2|p.E1519Rfs*42|1|0.29|ENSG00000136011|chr12:103715831-103715831|G/-|frameshift_variant'] 42508 23675 IEELKRQNELR True PC9_epitope_Rep5 1426.78922588662 1426.78812993586 96.044 2 -1.125617336882888 0.35296215169884365 1.0 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 85343 5857 QETKCSENKLP True H1975_Epitope_Rep3 1275.61290131743 1275.61180993586 27.542 2 -1.1257410204292138 0.35303406558420886 1.0 ['APEX1|p.V206Cfs*11|1|0.16|ENSG00000100823|chr14:20457164-20457165|-/T|frameshift_variant', 'ENST00000557159.5_1_14:20924026-20925664:+|nuORF', 'ENSG00000100823|ENST00000216714|APEX1'] 37813 13309 GYGGGHGG True PC9_epitope_Rep1 660.2615873981199 660.2610349679301 56.055 1 -1.1257827290969578 0.3530378086518013 1.0 ['CON__P13645'] 13446 4703 DNDGSTALSIA True NCI_RA007_Epitope_Rep3 1062.4829326937 1062.48182993586 25.444 2 -1.1257835831130663 0.3530378086518013 1.0 ['nc|ENSG00000107104|Q14678-2|KANK1', 'ENSG00000107104|ENST00000382297|KANK1'] 126993 19967 VLRSWWPRWWW True H1975_Epitope_Rep3 1656.8466216234397 1656.8455299358602 83.563 2 -1.1258916870119502 0.35307151589242053 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 127008 20496 VLRWFAERVDL True NCI_RA007_Epitope_Rep2 1402.7721192704998 1402.77102993586 84.797 2 -1.125973991736859 0.35311795642374155 1.0 ['nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENSG00000024422|ENST00000263277|EHD2', 'EHD2|p.D352Tfs*12|1|0.43|ENSG00000024422|chr19:47736504-47736504|G/-|frameshift_variant'] 65737 8720 LSCTHMRIQ True PC9_epitope_Rep5 1087.52666959567 1087.5255699358602 38.484 2 -1.1260208839641943 0.35317712975932763 1.0 ['ENST00000326306.4_1_3:39371235-39371268:+|nuORF'] 127324 24889 VMKKCRKL True PC9_epitope_Rep3 1004.5987123371199 1004.59760993586 101.11 2 -1.1260477421332247 0.3531853662884721 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 82540 20442 PPSASGVF True PC9_epitope_Rep4 760.3755545212 760.37444993586 86.775 2 -1.126135571682535 0.3532190699332756 1.0 ['GCM1|p.Y288F|1|0.38|ENSG00000137270|chr6:53128654-53128654|T/A|missense_variant'] 3036 8731 AFQHMQHF True PC9_epitope_Rep1 1044.4599699348398 1044.45886993586 38.42 2 -1.12637786874567 0.3533313810621204 1.0 ['ENSG00000198793|ENST00000361445|MTOR', 'ENST00000495435.1_1_1:11193031-11204809:-|nuORF'] 25859 5918 FFGCFTEKHI True PC9_epitope_Rep5 1227.57466533391 1227.57301490379 27.756 3 -1.1263895608949515 0.3533313810621204 1.0 ['ENSG00000247746|ENST00000500968|USP51'] 37285 4669 GVRTLTPNPTA True H1975_Epitope_Rep3 1125.61422164677 1125.6131299358601 23.083 2 -1.1264324728252901 0.3533313810621204 1.0 ['ENST00000557149.5_1_14:21492198-21492406:-|nuORF', 'ENST00000553503.5_1_14:21492198-21493040:-|nuORF', 'ENST00000557264.5_1_14:21492198-21492413:-|nuORF', 'ENST00000554415.5_1_14:21492198-21493677:-|nuORF', 'ENST00000397844.6_1_14:21492198-21493600:-|nuORF', 'ENST00000556147.5_1_14:21492198-21492312:-|nuORF', 'ENST00000555158.5_1_14:21492198-21493056:-|nuORF', 'ENST00000556924.5_1_14:21492198-21493426:-|nuORF'] 39699 11654 HLSMLEGKGP True PC9_epitope_Rep5 1067.54336520563 1067.54226993586 49.822 2 -1.1264403615516814 0.3533313810621204 1.0 ['ENST00000502490.1_1_5:14390521-14397340:+|nuORF'] 50095 14050 KKIRICHIFTF True H1975_Epitope_Rep1 1404.8063966042398 1404.8052899358602 59.207 2 -1.1264467396151832 0.3533313810621204 1.0 ['LMO7-ITGBL1|1|fusion', 'nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7'] 44738 16081 ILWVLVKCA True NCI_RA007_Epitope_Rep3 1043.6201589743498 1043.6190699358601 70.948 2 -1.1264886671993763 0.3533313810621204 1.0 ['ENST00000404424.5_1_2:29336870-29336996:+|nuORF'] 81103 12522 PIYAESTK True PC9_epitope_Rep6 907.46509780159 907.46400993586 59.6 2 -1.1265371678667944 0.3533313810621204 1.0 ['ENSG00000275342|ENST00000615670|PRAG1'] 81718 12697 PLNLSKKSEI True H1975_Epitope_Rep3 1127.65502382959 1127.65392993586 54.05 2 -1.1265476800909249 0.3533313810621204 1.0 ['ENSG00000141579|ENST00000269394|ZNF750'] 111962 6422 TIQNPLAR True H1975_Epitope_Rep3 911.5188647099499 911.51776993586 29.68 2 -1.1265691616945492 0.3533313810621204 1.0 ['nc|ENSG00000145103|Q86SU0-5|ILDR1'] 122389 6584 VGDNRVVL True PC9_epitope_Rep6 870.4923156089399 870.49120993586 34.03 2 -1.1265977206204871 0.3533396144737847 1.0 ['ENSG00000117983|ENST00000529681|MUC5B'] 22387 9696 ETEENDKGPV True H1975_Epitope_Rep2 1116.4934973773998 1116.49240993586 42.278 2 -1.1266742156421554 0.35334258469451413 1.0 ['ENST00000596690.1_2_19:52403157-52403544:-|nuORF'] 64745 13437 LPYQRRYRERR True H1975_Epitope_Rep1 1591.88077528603 1591.8796699358602 56.799 2 -1.1266744171347387 0.35334258469451413 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 10218 3711 CCCCCCCS True PC9_epitope_Rep3 826.10688658094 826.10578993586 19.379 2 -1.1267128087547222 0.35334258469451413 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 68982 12103 LTPLQTELYKR True H1975_Epitope_Rep3 1360.77145056416 1360.7703499358602 51.72 2 -1.1267230332323348 0.35334258469451413 1.0 ['ENSG00000085999|ENST00000371975|RAD54L'] 74495 5263 NFGAGGIK True NCI_RA007_Epitope_Rep5 762.40243797538 762.40134993586 26.94 2 -1.1267431356351014 0.35334258469451413 1.0 ['nc|ENSG00000160218|P48553-2|TRAPPC10'] 13310 9321 DLTRDKSVP True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 40.709 2 -1.1267783905040678 0.35338901054132504 1.0 ['RPS3A|p.M110Sfs*11|1|0.11|ENSG00000145425|chr4:151101137-151101137|T/-|frameshift_variant'] 123364 4970 VGMEESQAVP True PC9_epitope_Rep3 1045.4750108622898 1045.47390993586 24.211 2 -1.1268182365495705 0.35339724248558224 1.0 ['SSH3|p.A521V|1|0.18|ENSG00000172830|chr11:67310218-67310218|C/T|missense_variant'] 6095 7546 APLTLLPAVP True NCI_RA007_Epitope_Rep4 990.6113681124599 990.61026993586 35.67 2 -1.1268774342388086 0.3534039411375325 1.0 ['ENST00000526084.1_1_11:7687117-7687363:-|nuORF'] 42069 11816 IDKWAIADAQ True PC9_epitope_Rep5 1129.5767735088898 1129.57566993586 50.446 2 -1.1268836525230799 0.3534039411375325 1.0 ['ENSG00000115904|ENST00000402219|SOS1', 'SOS2|p.P81S|1|0.07|ENSG00000100485|chr14:50201057-50201057|G/A|missense_variant', 'nc|ENSG00000115904|Q07889-2|SOS1', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2', 'SOS2|p.Q742Tfs*14|1|0.03|ENSG00000100485|chr14:50150168-50150169|-/CACATCTCAAATTTGTTTCCCCTAGT|frameshift_variant', 'SOS2|p.M420Ifs*3|1|0.4|ENSG00000100485|chr14:50160023-50160024|-/A|frameshift_variant'] 67523 18720 LSTKFKYRYE True PC9_epitope_Rep2 1333.7030366511697 1333.70192993586 77.38 2 -1.1269004281295973 0.3534039411375325 1.0 ['ENSG00000166349|ENST00000299440|RAG1'] 82772 19367 PRLVGDLVP True PC9_epitope_Rep1 964.5705659296399 964.56946993586 79.302 2 -1.1269434729088754 0.3534039411375325 1.0 ['ENST00000582874.1_1_17:37809793-37814734:+|nuORF'] 101111 15803 SLGLEQPL True PC9_epitope_Rep3 855.4701831820299 855.46908993586 65.941 2 -1.1269572487847122 0.3534039411375325 1.0 ['nc|ENSG00000144560|Q14135-5|VGLL4', 'nc|ENSG00000144560|Q14135-6|VGLL4', 'nc|ENSG00000144560|Q14135-2|VGLL4', 'nc|ENSG00000144560|Q14135|VGLL4', 'nc|ENSG00000144560|Q14135-4|VGLL4', 'ENSG00000144560|ENST00000430365|VGLL4'] 55243 9135 LADIVKINN True PC9_epitope_Rep5 998.5760452329 998.57494993586 40.083 2 -1.126961067522433 0.3534039411375325 1.0 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 20593 5071 EPSMSWWP True H1975_Epitope_Rep2 1018.42185309062 1018.42074993586 24.588 2 -1.1269716563824321 0.3534039411375325 1.0 ['ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-9|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7'] 80503 21942 PGMVAHAS True H1975_Epitope_Rep2 768.35885891124 768.35776993586 90.723 2 -1.127068210593111 0.35342786588936126 1.0 ['ENST00000295628.3_1_3:120045250-120045442:-|nuORF'] 97812 9301 SELILVVAR True H1975_Epitope_Rep1 998.61243074162 998.61132993586 40.684 2 -1.1270984321930084 0.35342786588936126 1.0 ['ENST00000482069.5_1_10:79795365-79795422:+|nuORF'] 10219 3805 CCCCCCCS True PC9_epitope_Rep3 826.10688658094 826.10578993586 19.738 2 -1.1271092206513138 0.35342786588936126 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 124683 4071 VGYPDCWT True PC9_epitope_Rep5 939.3796539254699 939.37854993586 20.732 2 -1.1271161966338865 0.35342786588936126 1.0 ['ENST00000553851.2_1_X:48928954-48929044:-|nuORF'] 84731 3887 QDRLLIPRWR True NCI_RA007_Epitope_Rep2 1351.7836870137098 1351.78204490379 19.755 3 -1.127119932525665 0.35342786588936126 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 13340 19410 DLVLLQKW True PC9_epitope_Rep4 1013.59096702105 1013.58986993586 82.771 2 -1.127172293418093 0.35342786588936126 1.0 ['ENST00000354914.7_1_8:27849814-27850009:-|nuORF'] 101108 8587 SLGLEKFKKPE True NCI_RA007_Epitope_Rep5 1274.7234377425796 1274.7223499358602 39.71 2 -1.1272235355718303 0.3534360958721026 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 17657 8840 EHKLQHHKTFR True PC9_epitope_Rep5 1459.77966426243 1459.77802490379 38.946 3 -1.127252262267866 0.35344432564533373 1.0 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 45497 5925 IQNERTYEVPD True H1975_Epitope_Rep2 1362.6415585934199 1362.6404699358602 27.775 2 -1.127270280948194 0.3534607845632971 1.0 ['nc|ENSG00000112782|Q9NZA1|CLIC5'] 17985 6145 EIDKNQINI True H1975_Epitope_Rep2 1085.57168812845 1085.5705899358602 28.609 2 -1.1272706778276682 0.3534607845632971 1.0 ['nc|ENSG00000196091|Q00872-5|MYBPC1', 'nc|ENSG00000196091|Q00872-3|MYBPC1', 'nc|ENSG00000196091|Q00872-9|MYBPC1', 'nc|ENSG00000196091|Q00872-8|MYBPC1', 'nc|ENSG00000196091|Q00872-7|MYBPC1', 'nc|ENSG00000196091|Q00872-10|MYBPC1', 'nc|ENSG00000196091|Q00872-2|MYBPC1', 'ENSG00000196091|ENST00000361466|MYBPC1', 'nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 13422 9538 DMELWKEH True H1975_Epitope_Rep2 1086.4804305959 1086.47932993586 41.66 2 -1.127314548582406 0.35347724264331537 1.0 ['ENST00000494263.5_1_2:219646839-219678911:+|nuORF', 'ENSG00000135929|ENST00000258415|CYP27A1'] 113435 9546 TLSNERIP True PC9_epitope_Rep1 928.4977949121999 928.49668993586 41.576 2 -1.1273240699488971 0.35347724264331537 1.0 ['ENST00000332047.9_1_3:134204707-134214160:+|nuORF'] 113936 21097 TPAAAAAAAA True PC9_epitope_Rep5 784.40791727864 784.40682993586 86.213 2 -1.1274012489005198 0.35349819903524293 1.0 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN'] 24535 5079 FAGCGGYK True NCI_RA007_Epitope_Rep5 801.34795987437 801.34686993586 26.237 2 -1.127458211509681 0.35351465553448475 1.0 ['ENST00000550464.5_1_12:56352348-56359775:-|nuORF', 'ENST00000449260.6_1_12:56355419-56359775:-|nuORF'] 61544 11235 LKGMLIPC True NCI_RA007_Epitope_Rep4 873.48161689621 873.48050993586 50.106 2 -1.1274801187595027 0.35351465553448475 1.0 ['ENSG00000153975|ENST00000368576|ZUP1'] 94159 23660 RRPDIFHALKM True PC9_epitope_Rep1 1382.76050904098 1382.75887490379 95.797 3 -1.1276243822350913 0.35356029271396755 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 31039 5585 GATAALVQWPD True H1975_Epitope_Rep3 1127.56112344475 1127.56002993586 26.523 2 -1.1276783571867053 0.35356029271396755 1.0 ['ENSG00000126243|ENST00000246529|LRFN3'] 32415 21586 GFSKRKLRQ True PC9_epitope_Rep6 1118.6672602791398 1118.6661699358601 95.907 2 -1.1276884798142968 0.35356029271396755 1.0 ['ENSG00000047648|ENST00000337414|ARHGAP6', 'nc|ENSG00000047648|O43182-3|ARHGAP6', 'nc|ENSG00000047648|O43182-2|ARHGAP6', 'ENST00000489330.6_1_X:11166772-11683098:-|nuORF'] 1690 21371 AEGGKHIHELE True NCI_RA007_Epitope_Rep5 1218.59929985862 1218.59764490379 89.262 3 -1.1277033238451135 0.35356029271396755 1.0 ['ENSG00000264424|ENST00000255381|MYH4'] 127463 21768 VNKKVPVLL True PC9_epitope_Rep2 1008.6695516949198 1008.6684499358599 89.201 2 -1.1277334711404632 0.3536194257788638 1.0 ['ENSG00000126215|ENST00000555055|XRCC3'] 45106 19567 IPLIERLQRN True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74426490379 82.158 3 -1.1278761989590755 0.3536658309683495 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 18273 11925 EIQWHRLWSW True H1975_Epitope_Rep1 1439.7098533671099 1439.7087499358602 50.871 2 -1.127897244667673 0.3536740563516506 1.0 ['ENST00000422287.6_1_4:164087739-164087910:-|nuORF'] 97206 3835 SDYGRRDPERN True NCI_RA007_Epitope_Rep2 1363.6228888375097 1363.62124490379 19.553 3 -1.1279683509563365 0.3536770039321482 1.0 ['ADGRA3|p.G581R|1|0.33|ENSG00000152990|chr4:22420954-22420954|C/T|missense_variant'] 123894 22831 VGRRRRHR True PC9_epitope_Rep3 1091.6649092937098 1091.6638099358602 93.092 2 -1.1279771893251735 0.3536770039321482 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 66626 17554 LSKFQKIEP True PC9_epitope_Rep6 1088.62299542532 1088.62188993586 80.161 2 -1.1279861676901304 0.3536770039321482 1.0 ['ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1', 'nc|ENSG00000107959|Q5JRX3-3|PITRM1'] 106974 4993 SVEFSEEPFG True NCI_RA007_Epitope_Rep3 1126.4818700645399 1126.48021490379 26.638 3 -1.1280076811547173 0.3536770039321482 1.0 ['ENSG00000171298|ENST00000302262|GAA', 'GAA|p.T551Pfs*27|1|0.19|ENSG00000171298|chr17:80111991-80111991|G/-|frameshift_variant', 'GAA|p.V466Ffs*11|1|0.16|ENSG00000171298|chr17:80110009-80110009|G/-|frameshift_variant', 'GAA|p.E748Gfs*48|1|0.14|ENSG00000171298|chr17:80117014-80117015|-/G|frameshift_variant'] 97185 11552 SDVTDPVFVP True PC9_epitope_Rep4 1074.5233409537 1074.5222499358601 52.195 2 -1.1280344501272475 0.3536770039321482 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 27988 10106 FQKYSNME True H1975_Epitope_Rep3 1045.4538814948899 1045.4527899358602 43.914 2 -1.1281897148615 0.35373612949200856 1.0 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 102783 6 SNNDDDED True H1975_Epitope_Rep3 922.27881315354 922.27770993586 0.02711 2 -1.128207590473905 0.3537398518820146 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 22102 13270 ESQAAKDLLYR True H1975_Epitope_Rep1 1292.67246479888 1292.6713699358602 56.143 2 -1.128230812850339 0.3537398518820146 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 12947 6339 DLLDISSVDRL True PC9_epitope_Rep2 1244.66123140884 1244.65957490379 29.783 3 -1.1282515051125857 0.3537608001323374 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 101093 12924 SLGILIFVLIE True H1975_Epitope_Rep3 1215.74786158527 1215.7467699358601 54.94 2 -1.1282877342926392 0.3537690232605487 1.0 ['IMPG2|p.I1076Ffs*25|1|0.53|ENSG00000081148|chr3:101232789-101232789|G/-|frameshift_variant', 'ENSG00000081148|ENST00000193391|IMPG2', 'IMPG2|p.G283Wfs*12|1|0.27|ENSG00000081148|chr3:101269555-101269556|-/A|frameshift_variant', 'IMPG2|p.S423Qfs*36|1|0.13|ENSG00000081148|chr3:101246079-101246079|G/-|frameshift_variant'] 119301 7972 VALVGGRGPP True PC9_epitope_Rep2 921.5396001545299 921.53850993586 36.028 2 -1.1283297257220635 0.35377724617949075 1.0 ['ENST00000240123.11_2_8:22432273-22432342:+|nuORF'] 79232 6426 PAPPHCLPS True H1975_Epitope_Rep3 917.44292288837 917.44182993586 29.694 2 -1.1283591804174413 0.3537854688891717 1.0 ['ENST00000296511.9_1_4:122589480-122589621:-|nuORF'] 138744 22619 YIRRVRMRP True PC9_epitope_Rep4 1245.7240639626098 1245.72241490379 95.234 3 -1.1284079083027148 0.3537891897394137 1.0 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 102841 4732 SNSKESIWEFI True NCI_RA007_Epitope_Rep5 1338.6455813446998 1338.64448993586 24.886 2 -1.1284116151490395 0.3537891897394137 1.0 ['CLCN4|p.K52N|1|0.29|ENSG00000073464|chrX:10187526-10187526|G/T|missense_variant'] 5259 11029 ALPRTLQP True PC9_epitope_Rep3 894.5287011176599 894.52760993586 47.414 2 -1.1284397853926402 0.35381013576272696 1.0 ['ENST00000480424.6_1_16:630268-633631:+|nuORF'] 46933 15104 ITNVVRDVNSI True PC9_epitope_Rep5 1228.67755017932 1228.67644993586 63.104 2 -1.128492262936417 0.3538310812530219 1.0 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF', 'ENST00000506478.1_1_4:103643970-103645033:-|nuORF'] 91157 939 RGAGSKRKRR True H1975_Epitope_Rep3 1170.71700443622 1170.71536490379 5.0975 3 -1.128507933024356 0.35383930275462816 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 78827 17505 PADLLQLVL True NCI_RA007_Epitope_Rep5 980.59063266788 980.58952993586 74.122 2 -1.128529706867655 0.3538475240470253 1.0 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR', 'TSHR|p.P51Rfs*7|1|0.12|ENSG00000165409|chr14:80955831-80955831|C/-|frameshift_variant', 'nc|ENSG00000165409|P16473-2|TSHR', 'TSHR|p.F366Lfs*46|1|0.11|ENSG00000165409|chr14:81143153-81143153|T/-|frameshift_variant', 'nc|ENSG00000165409|P16473-3|TSHR'] 112209 10745 TKKKKKKKKG True PC9_epitope_Rep1 1200.8394109846797 1200.83776490379 46.217 3 -1.1285643066598277 0.3538512430341739 1.0 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-2|PCDHA1', 'ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'ENSG00000249158|ENST00000398640|PCDHA11', 'ENSG00000204965|ENST00000529859|PCDHA5', 'ENSG00000204967|ENST00000530339|PCDHA4', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'ENSG00000081842|ENST00000529310|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'ENSG00000250120|ENST00000307360|PCDHA10', 'ENSG00000248383|ENST00000253807|PCDHAC1', 'ENSG00000251664|ENST00000398631|PCDHA12'] 119887 21659 VDHGVGIMNKR True NCI_RA007_Epitope_Rep5 1224.63972520196 1224.63808490379 90.407 3 -1.128566133633229 0.3538512430341739 1.0 ['nc|ENSG00000160199|P55347-2|PKNOX1'] 80426 19713 PGKNFKLVKC True H1975_Epitope_Rep2 1132.6426853240798 1132.64158993586 81.795 2 -1.1285808690981105 0.35385946386086337 1.0 ['nc|ENSG00000120899|Q14289-2|PTK2B', 'ENSG00000120899|ENST00000346049|PTK2B'] 135717 10948 WLSSWVKTGYK True H1975_Epitope_Rep3 1353.7081220316102 1353.7070299358602 47.198 2 -1.1286186150481303 0.3538653334859876 1.0 ['ENSG00000187122|ENST00000266058|SLIT1'] 52742 8900 KMNKLGTKIVS True NCI_RA007_Epitope_Rep5 1217.71657854033 1217.71492490379 40.896 3 -1.1286267517478754 0.3538653334859876 1.0 ['ENSG00000168497|ENST00000304141|CAVIN2'] 16383 8149 EEIRNHVLR True H1975_Epitope_Rep1 1164.63635407368 1164.6352499358602 36.285 2 -1.1286309063023467 0.3538653334859876 1.0 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP'] 58299 11396 LELWVNYYVRW True NCI_RA007_Epitope_Rep2 1539.7874349814701 1539.78632993586 48.918 2 -1.128635247677016 0.3538653334859876 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 27243 10133 FLPLNTPV True H1975_Epitope_Rep3 899.51165407119 899.51054993586 44.021 2 -1.1286792772629204 0.3538653334859876 1.0 ['nc|ENSG00000060709|O15034-3|RIMBP2', 'nc|ENSG00000060709|O15034|RIMBP2', 'ENSG00000060709|ENST00000690449|RIMBP2'] 14855 19529 DVWRKKYMRWM True NCI_RA007_Epitope_Rep2 1597.8009939539697 1597.7998899358602 80.903 2 -1.128685008471821 0.3538653334859876 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 81604 11663 PLLALTTT True NCI_RA007_Epitope_Rep3 828.4956696538801 828.49456993586 52.994 2 -1.1286857381844908 0.3538653334859876 1.0 ['PI4KB|p.R366Efs*33|1|0.12|ENSG00000143393|chr1:151307660-151307660|G/-|frameshift_variant'] 86534 19149 QLCPRCDLSC True PC9_epitope_Rep1 1136.47767079792 1136.4765699358602 78.45 2 -1.1287637162145139 0.3538653334859876 1.0 ['ENST00000292377.3_1_7:99774686-99774926:-|nuORF'] 4526 24585 AKGRRKAF True PC9_epitope_Rep4 932.5668179618798 932.56572993586 103.06 2 -1.128768417319909 0.3538653334859876 1.0 ['ENSG00000204657|ENST00000641840|OR2H2'] 86445 23345 QKLKPQTHQK True PC9_epitope_Rep4 1234.71460439438 1234.71295490379 98.054 3 -1.1287947284442086 0.3538653334859876 1.0 ['ENST00000282030.5_1_18:42644666-42644876:+|nuORF'] 69474 7835 LVAGQSKTSP True NCI_RA007_Epitope_Rep5 986.53965972418 986.53856993586 36.836 2 -1.128827707924009 0.3538817722710562 1.0 ['ENST00000560374.5_1_15:83654729-83654861:-|nuORF'] 54280 16519 KWTMEVICY True H1975_Epitope_Rep3 1171.5405883243097 1171.53948993586 69.036 2 -1.1288344576269822 0.3538817722710562 1.0 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-4|RALGAPB'] 15964 4629 EDPYIRHTHQV True NCI_RA007_Epitope_Rep2 1393.67386178121 1393.67221490379 22.63 3 -1.128847848320677 0.35388548967727984 1.0 ['ENST00000464685.1_1_2:99787951-99788122:-|nuORF'] 81547 10290 PLKEEDQK True H1975_Epitope_Rep1 985.5080252427298 985.50692993586 44.525 2 -1.1288816576160938 0.35388548967727984 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 114052 9498 TPEFVDLSVP True H1975_Epitope_Rep1 1102.55464108198 1102.55354993586 41.454 2 -1.1289439334780675 0.35395731040272727 1.0 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 4213 9676 AIASTHSPY True PC9_epitope_Rep4 945.45559574705 945.45448993586 44.847 2 -1.1289599230557434 0.35396552820708516 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 18389 8476 EITRYSFYTFI True H1975_Epitope_Rep1 1438.7132669817 1438.7121699358602 37.532 2 -1.1290210770277398 0.35396845586364795 1.0 ['HACD1|p.S189I|1|0.25|ENSG00000165996|chr10:17599329-17599329|C/A|missense_variant'] 30798 16521 GANKALITPSL True PC9_epitope_Rep4 1083.62880908175 1083.6277099358601 71.521 2 -1.1290563817062234 0.35396845586364795 1.0 ['ENST00000457458.6_1_X:47088276-47088456:+|nuORF'] 141916 7734 YVESSSHL True NCI_RA007_Epitope_Rep2 920.4239612655999 920.42286993586 34.71 2 -1.1290580029789754 0.35396845586364795 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 65243 18554 LQSMKHCQV True PC9_epitope_Rep2 1072.5157705588 1072.5146699358602 76.718 2 -1.1290679466567282 0.35396845586364795 1.0 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 76100 442 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 2.4381 3 -1.1290717811773288 0.35396845586364795 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 18546 8628 EKLIKEFQD True NCI_RA007_Epitope_Rep5 1148.607739284 1148.60664993586 39.864 2 -1.1290902411836652 0.35397667289909823 1.0 ['nc|ENSG00000159267|P50747|HLCS', 'ENSG00000159267|ENST00000674895|HLCS'] 59129 11152 LEYQTAVMRRD True H1975_Epitope_Rep1 1380.6819839367597 1380.68088993586 47.864 2 -1.129150990591345 0.3540103278980438 1.0 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 44916 7863 INSAAAQM True PC9_epitope_Rep1 804.37998827864 804.37888993586 35.071 2 -1.1292057336384946 0.35405670096536634 1.0 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1'] 57376 7839 LEALRAEHH True H1975_Epitope_Rep1 1074.55704112382 1074.55594993586 35.103 2 -1.1292229815704682 0.35406491656491657 1.0 ['nc|ENSG00000104892|Q6P597-2|KLC3', 'ENSG00000104892|ENST00000391946|KLC3', 'nc|ENSG00000104892|Q6P597-3|KLC3', 'ENST00000494686.1_1_19:45844037-45850131:+|nuORF'] 4280 7834 AIGGSKPK True PC9_epitope_Rep1 756.4493881678 756.44828993586 34.96 2 -1.1292458525042104 0.3540731319554849 1.0 ['nc|ENSG00000135903|P23760|PAX3', 'nc|ENSG00000135903|P23760-6|PAX3', 'ENSG00000135903|ENST00000392070|PAX3', 'nc|ENSG00000135903|P23760-8|PAX3', 'nc|ENSG00000135903|P23760-3|PAX3', 'nc|ENSG00000135903|P23760-2|PAX3', 'PAX3|p.S374Wfs*7|1|0.15|ENSG00000135903|chr2:222220192-222220192|G/-|frameshift_variant', 'nc|ENSG00000135903|P23760-4|PAX3', 'nc|ENSG00000135903|P23760-5|PAX3'] 133157 5252 VVRDPQGI True NCI_RA007_Epitope_Rep4 882.4923156089399 882.49120993586 26.744 2 -1.129248435457098 0.35407684383227134 1.0 ['ENSG00000090382|ENST00000261267|LYZ'] 104105 11018 SQEEHQDFLQF True H1975_Epitope_Rep2 1406.61025846514 1406.60916993586 47.409 2 -1.1292740564538108 0.35407684383227134 1.0 ['ENSG00000172215|ENST00000304552|CXCR6'] 48676 16133 KAVGPKGNIL True PC9_epitope_Rep6 995.6127650947899 995.61166993586 74.399 2 -1.1292880657718827 0.3540932734741635 1.0 ['ENST00000596658.1_1_19:50433558-50434160:+|nuORF'] 102165 12427 SLRRWPPL True PC9_epitope_Rep5 1023.5977837369899 1023.5966899358599 52.799 2 -1.129296828189095 0.3540932734741635 1.0 ['ENSG00000162571|ENST00000379289|TTLL10', 'nc|ENSG00000162571|Q6ZVT0-2|TTLL10'] 19870 14146 ELTHLYWLWY True H1975_Epitope_Rep2 1422.69722299474 1422.6961299358602 59.567 2 -1.1293292770945655 0.35409698464982003 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1'] 84055 13174 PVWAGHGG True NCI_RA007_Epitope_Rep5 779.3714722002699 779.37036993586 57.35 2 -1.1293294280635013 0.35409698464982003 1.0 ['ENSG00000214860|ENST00000399134|EVPLL', 'ENST00000564629.1_1_16:31469053-31469224:-|nuORF'] 76125 1843 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 10.196 3 -1.1294006909703933 0.35413063383864074 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 69183 13872 LTSDNVIR True PC9_epitope_Rep3 916.4977949122 916.49668993586 58.441 2 -1.1294363459098573 0.35417699947859044 1.0 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 139323 16523 YLKYGRVYNWP True NCI_RA007_Epitope_Rep1 1457.7455701694896 1457.74446993586 68.386 2 -1.1294523480707703 0.3541852125034972 1.0 ['ENST00000462251.1_1_19:11877828-11888701:+|nuORF'] 26807 10887 FLAFEAQLSV True PC9_epitope_Rep5 1123.5913609438699 1123.58971490379 46.864 3 -1.1294746629540606 0.3542053460159211 1.0 ['ENST00000506793.5_1_4:44680541-44700695:+|nuORF', 'ENSG00000151806|ENST00000281543|GUF1'] 1175 10633 AEAPSPAPTP True H1975_Epitope_Rep3 936.4552613938799 936.45416993586 45.973 2 -1.1295238486477277 0.3542053460159211 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 137711 5657 YELLANEFNS True NCI_RA007_Epitope_Rep1 1198.5506183307 1198.5489749037902 26.064 3 -1.1295601427806174 0.3542053460159211 1.0 ['RASSF9|p.K362N|1|0.16|ENSG00000198774|chr12:85804924-85804924|C/A|missense_variant'] 10716 23418 CRRRRPRPEA True PC9_epitope_Rep2 1295.71053915679 1295.7088949037902 95.55 3 -1.1295731498111017 0.3542053460159211 1.0 ['ENST00000480661.1_1_1:6259306-6259615:-|nuORF'] 81474 16371 PLGESPHTLS True PC9_epitope_Rep5 1036.5189242796 1036.5178299358602 67.967 2 -1.129661503690684 0.35423899083152127 1.0 ['ENSG00000102313|ENST00000218436|ITIH6', 'ITIH6|p.S731Qfs*9|1|0.37|ENSG00000102313|chrX:54757884-54757884|G/-|frameshift_variant'] 83695 19291 PVFNQLIY True NCI_RA007_Epitope_Rep4 992.5331177917599 992.53256496793 83.418 1 -1.1296904152428282 0.35425912032857343 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant'] 54127 6822 KVPEKLAA True PC9_epitope_Rep2 854.5225531080598 854.52144993586 31.646 2 -1.1296944424352828 0.35425912032857343 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 31870 6439 GELHAKVPS True H1975_Epitope_Rep3 936.50288029264 936.50178993586 29.745 2 -1.1297187536363318 0.35425912032857343 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D'] 121737 10479 VFLPLPSP True PC9_epitope_Rep5 868.50584041476 868.50474993586 45.294 2 -1.1297414782893958 0.35425912032857343 1.0 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 14883 17314 DWQRQLRYYWD True NCI_RA007_Epitope_Rep2 1627.75317473107 1627.7520699358602 72.084 2 -1.1297704721082191 0.35426733126494075 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 94687 20244 RRYRRNFNYRR True H1975_Epitope_Rep1 1655.8981566856696 1655.8970499358602 84.217 2 -1.1298351283779209 0.35428375251125294 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 84287 15020 PYPTYPASAS True PC9_epitope_Rep3 1052.48147614172 1052.4803699358602 62.901 2 -1.1298364547115252 0.35428375251125294 1.0 ['ENST00000537971.5_1_12:3392287-3392575:+|nuORF'] 31166 9604 GAWRGWLGGW True NCI_RA007_Epitope_Rep3 1144.5566472009998 1144.5555499358602 44.861 2 -1.1299834235704498 0.3543502307662967 1.0 ['ENST00000395184.5_1_4:86396395-86396566:+|nuORF'] 66892 5676 LSNLGHPESPP True NCI_RA007_Epitope_Rep2 1146.56693710118 1146.5658499358601 26.693 2 -1.1300644518408753 0.3543502307662967 1.0 ['nc|ENSG00000145604|Q13309-2|SKP2', 'ENSG00000145604|ENST00000274255|SKP2'] 18242 4730 EIPELRNK True NCI_RA007_Epitope_Rep5 997.55564414149 997.55454993586 24.878 2 -1.130070486226532 0.3543502307662967 1.0 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'RAD50|p.M1045Sfs*11|1|0.14|ENSG00000113522|chr5:132616098-132616099|-/TCTAC|frameshift_variant', 'RAD50|p.M1045Rfs*11|1|0.14|ENSG00000113522|chr5:132616100-132616101|TG/-|frameshift_variant', 'RAD50|p.Q755H|1|0.08|ENSG00000113522|chr5:132603357-132603357|G/C|missense_variant'] 67898 10245 LTCGVGLQTR True H1975_Epitope_Rep2 1046.5542642425 1046.55316993586 44.413 2 -1.13011820432813 0.3543502307662967 1.0 ['ADAMTSL1|p.C1678Vfs*28|1|0.41|ENSG00000178031|chr9:18906759-18906760|-/T|frameshift_variant', 'ADAMTSL1|p.N1700Tfs*41|1|0.33|ENSG00000178031|chr9:18906826-18906826|C/-|frameshift_variant', 'ENSG00000178031|ENST00000380548|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF'] 101195 5663 SLHAVFGVQG True PC9_epitope_Rep5 1013.5294293936499 1013.52832993586 26.781 2 -1.1301656032458782 0.3543502307662967 1.0 ['ENST00000475668.6_1_7:141792367-141794581:+|nuORF'] 16845 12595 EFDAYIKDMAK True H1975_Epitope_Rep3 1329.6274887524098 1329.62638993586 53.649 2 -1.1301957714306388 0.3543584397090983 1.0 ['PTPRO|p.D922E|1|0.24|ENSG00000151490|chr12:15569435-15569435|C/G|missense_variant'] 77804 14163 NTVQRRVQPWL True NCI_RA007_Epitope_Rep1 1395.7735162528297 1395.7724099358602 59.125 2 -1.1302102935601293 0.35436664844316174 1.0 ['MPPED1|p.R278W|1|0.31|ENSG00000186732|chr22:43502727-43502727|C/T|missense_variant'] 121486 21836 VEYLMEFGQWL True PC9_epitope_Rep5 1413.6638742611299 1413.66276993586 89.025 2 -1.130247831901071 0.3543830652851058 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 15010 14766 DYKGDATVFF True PC9_epitope_Rep4 1161.5342399905699 1161.5331499358601 64.731 2 -1.1302480430879627 0.3543830652851058 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 121478 23191 VEYGKKKRR True PC9_epitope_Rep3 1162.6934750269797 1162.69183490379 94.474 3 -1.1302508174993844 0.3543867678655428 1.0 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000414624.6_1_11:61645294-61658904:-|nuORF'] 37136 7776 GVQAPKPV True NCI_RA007_Epitope_Rep2 794.46503823194 794.46394993586 34.875 2 -1.1302539482548362 0.3543867678655428 1.0 ['ENST00000388759.7_1_3:23958288-23958423:-|nuORF'] 9683 5547 AYFYLDCVWR True H1975_Epitope_Rep3 1334.6117791186198 1334.6106899358601 26.382 2 -1.1302750090608582 0.3543949757176638 1.0 ['ENSG00000235631|ENST00000434824|RNF148'] 55946 23675 LARLKFEKYFN True PC9_epitope_Rep5 1427.7925203619095 1427.7914299358602 96.044 2 -1.1303120529353523 0.3544113907958302 1.0 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-2|UBA6'] 76119 1109 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 6.1433 3 -1.130314267649631 0.3544113907958302 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 28838 20369 FSYVRIFW True PC9_epitope_Rep5 1116.5756513100798 1116.5745499358602 83.384 2 -1.1303473145556397 0.3544323108020493 1.0 ['ENSG00000171501|ENST00000373688|OR1N2'] 88796 7551 QTTAQLQVQ True PC9_epitope_Rep5 1015.5298233164699 1015.52872993586 33.995 2 -1.130404095486189 0.3544532302763723 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 11422 21392 DEVQWTER True PC9_epitope_Rep5 1061.47778774361 1061.4766899358601 87.346 2 -1.1304646511411285 0.35446964303874706 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A', 'KIF1A-C2orf54|2|fusion', 'KIF1A-C2orf54|1|fusion'] 135120 20874 WEELPARVAGR True H1975_Epitope_Rep3 1282.6782188856598 1282.6771299358602 87.176 2 -1.130493756642135 0.35446964303874706 1.0 ['ENST00000564806.1_1_16:30036506-30036905:-|nuORF'] 116047 10807 TSPAKTKI True PC9_epitope_Rep6 844.50181766348 844.50072993586 52.413 2 -1.1305296994087404 0.3544725368315347 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 41899 15368 IDALQYKL True PC9_epitope_Rep2 962.5436824754601 962.54258993586 64.396 2 -1.1305573832428926 0.3544725368315347 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 76107 1798 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 9.8783 3 -1.1305711674224288 0.3544725368315347 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 85282 7287 QEQNEKIFAPR True H1975_Epitope_Rep1 1358.69426287262 1358.6931699358602 33.042 2 -1.130571975181659 0.3544725368315347 1.0 ['ENSG00000155265|ENST00000370602|GOLGA7B'] 36535 15549 GVGRVEQQP True H1975_Epitope_Rep2 968.5039429218 968.50284993586 64.964 2 -1.1306362979820122 0.3544725368315347 1.0 ['ENST00000563785.5_1_16:88722464-88729488:-|nuORF'] 18967 14841 ELEKYQQYKDI True H1975_Epitope_Rep1 1455.7245599413898 1455.72346993586 62.315 2 -1.1307228315845173 0.35450165880693013 1.0 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1'] 80753 13021 PHGWGGLS True H1975_Epitope_Rep3 809.3820368839699 809.3814849679301 55.322 1 -1.1308020275931232 0.35450165880693013 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 62447 7336 LLHQTQSAL True PC9_epitope_Rep5 1009.55564414149 1009.55454993586 33.178 2 -1.130831629454195 0.35451806846059003 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2', 'SBF2|p.E591Nfs*13|1|0.07|ENSG00000133812|chr11:9962046-9962046|C/-|frameshift_variant'] 16613 12249 EEPMATEPA True H1975_Epitope_Rep3 973.4062625961299 973.4057149679301 52.293 1 -1.1308367106590915 0.35451806846059003 1.0 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 16198 11505 EEEEEKLPLTK True NCI_RA007_Epitope_Rep1 1343.6820264230698 1343.6809299358601 48.718 2 -1.1308575877813145 0.35453898365406616 1.0 ['ENSG00000143458|ENST00000368918|GABPB2'] 13456 4838 DNDQALKFL True NCI_RA007_Epitope_Rep5 1062.53457434374 1062.53346993586 25.301 2 -1.1308738701458787 0.3545471877979028 1.0 ['DIP2C|p.R967L|1|0.19|ENSG00000151240|chr10:357832-357832|C/A|missense_variant'] 123642 16266 VGQILLWDFGY True PC9_epitope_Rep5 1309.67067389373 1309.66903490379 67.558 3 -1.1309834315091354 0.3545508852650711 1.0 ['nc|ENSG00000182931|Q8IUB3-2|WFDC10B'] 65719 20197 LSCKKKVALQ True PC9_epitope_Rep4 1116.6689000719198 1116.66780993586 85.825 2 -1.1309972738549599 0.3545508852650711 1.0 ['ENSG00000171435|ENST00000339824|KSR2'] 125466 25568 VIVLSVTTESK True PC9_epitope_Rep1 1174.68090422426 1174.67980993586 103.36 2 -1.131069286872207 0.3545955975801942 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 22625 5841 ETMDQYHFCY True H1975_Epitope_Rep1 1335.49000930343 1335.4889099358602 27.538 2 -1.131085887347562 0.3545955975801942 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU', 'ENST00000465525.6_1_1:29647190-29652170:+|nuORF'] 10689 5770 CQVSQMPENTF True NCI_RA007_Epitope_Rep4 1282.5322084685797 1282.53110993586 28.814 2 -1.1312073540780827 0.3545955975801942 1.0 ['ENST00000318220.10_1_1:21793573-21793636:+|nuORF'] 43054 14287 IEVEHIFKWI True H1975_Epitope_Rep2 1312.7179584393198 1312.7168699358601 60.104 2 -1.1312086584134806 0.3545955975801942 1.0 ['ENSG00000239305|ENST00000237455|RNF103', 'RNF103|p.W499Lfs*9|1|0.25|ENSG00000239305|chr2:86604405-86604406|-/A|frameshift_variant'] 107783 8305 SVTDRQSF True NCI_RA007_Epitope_Rep4 938.44575933934 938.44466993586 38.757 2 -1.131210274509739 0.3545955975801942 1.0 ['nc|ENSG00000152214|Q99578-2|RIT2', 'ENSG00000152214|ENST00000326695|RIT2'] 98200 9332 SETKASIS True PC9_epitope_Rep4 821.4130622287299 821.4125149679301 43.502 1 -1.1312579365967539 0.3545955975801942 1.0 ['ENST00000506258.2_1_5:14610455-14614889:+|nuORF'] 67538 13479 LSTLTPLHIA True PC9_epitope_Rep5 1064.6229954253201 1064.62188993586 56.864 2 -1.1312585749665793 0.3545955975801942 1.0 ['nc|ENSG00000144504|Q9P2S6-4|ANKMY1', 'nc|ENSG00000144504|Q9P2S6-2|ANKMY1', 'nc|ENSG00000144504|Q9P2S6|ANKMY1', 'ENSG00000144504|ENST00000401804|ANKMY1'] 113720 14495 TLYSPMSQKI True PC9_epitope_Rep5 1166.6005457285798 1166.5988849037901 60.755 3 -1.1312765367671966 0.35459767193615616 1.0 ['nc|ENSG850|P63123|ERVK-18_pro'] 79832 11710 PEGPLPPA True H1975_Epitope_Rep3 776.40685464948 776.40630496793 50.183 1 -1.131288177842532 0.35459767193615616 1.0 ['ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA'] 57897 10352 LEFWNFPPR True PC9_epitope_Rep1 1204.6029286870798 1204.60182993586 44.7 2 -1.1313242410083215 0.35459767193615616 1.0 ['ENST00000373109.6_1_10:73820245-73820362:-|nuORF'] 120035 12369 VDSKIRVP True PC9_epitope_Rep3 912.5392658013599 912.53816993586 52.607 2 -1.131343791402977 0.35459767193615616 1.0 ['nc|ENSG00000008382|Q8N594-2|MPND', 'nc|ENSG00000008382|Q8N594|MPND', 'ENSG00000008382|ENST00000599840|MPND'] 133314 24745 VVTVIIII True NCI_RA007_Epitope_Rep1 868.5997407995999 868.59864993586 102.45 2 -1.1313437945753289 0.35459767193615616 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 69225 10499 LTSQSRAP True PC9_epitope_Rep3 858.4559301002199 858.45482993586 45.324 2 -1.131359382100477 0.35459767193615616 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 13814 9876 DQLAKEAENEK True NCI_RA007_Epitope_Rep1 1273.6150094924099 1273.6139099358602 42.418 2 -1.1313599401513312 0.35459767193615616 1.0 ['nc|ENSG00000109083|Q8IY31-4|IFT20', 'ENST00000322326.12_1_17:26657393-26659262:-|nuORF', 'ENSG00000109083|ENST00000395418|IFT20', 'ENST00000582797.5_1_17:26657393-26662483:-|nuORF', 'nc|ENSG00000109083|Q8IY31-3|IFT20', 'nc|ENSG00000109083|Q8IY31-2|IFT20'] 126995 20580 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8455299358602 84.275 2 -1.1313627253942355 0.35459767193615616 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 41877 19293 ICEKHILWLKD True H1975_Epitope_Rep3 1396.7536923250398 1396.7525899358602 80.882 2 -1.1314290039986947 0.354617769645217 1.0 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C'] 114123 10655 TPGSGELGRIL True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 45.941 2 -1.1314557340601032 0.354617769645217 1.0 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ABCA2|p.P1465Qfs*9|1|0.4|ENSG00000107331|chr9:137013885-137013885|G/-|frameshift_variant', 'ABCA2|p.R973Afs*36|1|0.26|ENSG00000107331|chr9:137016581-137016581|C/-|frameshift_variant', 'ENST00000494046.5_1_9:139914760-139922592:-|nuORF', 'ENST00000464876.5_1_9:139914760-139916113:-|nuORF'] 5926 8672 APGRLEMPP True H1975_Epitope_Rep1 966.4956867372199 966.49458993586 38.286 2 -1.1314710297480794 0.354617769645217 1.0 ['ENST00000376350.7_2_19:55715404-55716852:-|nuORF'] 60928 17516 LICCCCTM True PC9_epitope_Rep3 888.3035951582001 888.30248993586 72.558 2 -1.1314728001646335 0.354617769645217 1.0 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 112706 21018 TLGPDWHEGLN True PC9_epitope_Rep1 1237.57275075761 1237.57164993586 85.674 2 -1.1314894595705511 0.35462146433200337 1.0 ['PYROXD1|p.A234T|1|0.16|ENSG00000121350|chr12:21456045-21456045|G/A|missense_variant'] 38568 7053 HEVHWETCRTV True PC9_epitope_Rep5 1395.6353680975099 1395.63373490379 32.098 3 -1.1314911457145571 0.35462146433200337 1.0 ['CER1|p.G188Wfs*38|1|0.07|ENSG00000147869|chr9:14720333-14720334|-/G|frameshift_variant', 'ENSG00000147869|ENST00000380911|CER1'] 32607 5238 GGHVLAGF True NCI_RA007_Epitope_Rep3 756.39187329168 756.39076993586 27.609 2 -1.1315272931116915 0.3546251588310038 1.0 ['ENSG00000188266|ENST00000388988|HYKK'] 86280 18115 QIRQKQEKKP True H1975_Epitope_Rep2 1281.75171817909 1281.7506299358602 75.069 2 -1.1315683662461336 0.3546251588310038 1.0 ['ERCC6|p.P253R|1|0.21|ENSG00000225830|chr10:49524672-49524672|G/C|missense_variant'] 91249 6150 RGGMNKGG True NCI_RA007_Epitope_Rep2 775.3759059577098 775.37480993586 28.53 2 -1.131596366509893 0.35463705322541705 1.0 ['ENSG00000130749|ENST00000253048|ZC3H4'] 85344 15877 QETKKIKITT True NCI_RA007_Epitope_Rep5 1188.7077876784397 1188.7061549037899 67.792 3 -1.1316326394178569 0.35463705322541705 1.0 ['ENST00000440835.6_1_12:71031939-71032017:-|nuORF'] 127423 12503 VNFQRKKWR True NCI_RA007_Epitope_Rep5 1260.7203584811598 1260.7192699358602 54.75 2 -1.1316452752336534 0.35463705322541705 1.0 ['ENSG00000104755|ENST00000265708|ADAM2', 'nc|ENSG00000104755|Q99965-2|ADAM2'] 113393 9065 TLSCLLPCSPP True PC9_epitope_Rep2 1129.55115300801 1129.5495149037902 40.214 3 -1.1317518792321684 0.3546534527666603 1.0 ['ENST00000525190.1_1_11:65688642-65688903:+|nuORF'] 129416 24575 VRFNPHTY True H1975_Epitope_Rep1 1032.5141136826799 1032.51300993586 101.83 2 -1.1317692348356474 0.3546534527666603 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5'] 72691 5242 MMHCMWWERWM True NCI_RA007_Epitope_Rep1 1625.6222439399698 1625.62114993586 24.473 2 -1.1318593346740125 0.35470346089342886 1.0 ['ENST00000301180.9_1_12:51133363-51135252:+|nuORF'] 130259 10140 VSGFAPRR True PC9_epitope_Rep4 888.49298431528 888.49188993586 46.682 2 -1.131887375349153 0.35470346089342886 1.0 ['chr17:76737086-76738282|355|14.57|0.0|20.48|+|1|None,MFSD11|1'] 117367 9401 TVPISFAVFP True NCI_RA007_Epitope_Rep1 1076.59063266788 1076.5895299358601 40.56 2 -1.1319049236032903 0.35470346089342886 1.0 ['ENSG00000013583|ENST00000014930|HEBP1'] 91848 16125 RKKKLKKKKTL True PC9_epitope_Rep5 1397.9922232279696 1397.99056490379 67.015 3 -1.132032290679524 0.3547198577055012 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 3127 9436 AGAPSPWPWE True NCI_RA007_Epitope_Rep1 1096.4977949122 1096.49668993586 40.697 2 -1.1320351257981318 0.3547198577055012 1.0 ['ENST00000486499.1_1_16:31096429-31097399:-|nuORF', 'ENST00000533518.5_3_16:31095113-31102425:-|nuORF', 'ENSG00000151006|ENST00000280606|PRSS53'] 59596 8568 LFVQVSLG True NCI_RA007_Epitope_Rep4 861.4960040070499 861.49490993586 39.741 2 -1.1320468572799407 0.3547362536843175 1.0 ['ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 16678 5860 EERENLEV True H1975_Epitope_Rep2 1016.4774533904398 1016.47634993586 27.526 2 -1.132093500608791 0.3547362536843175 1.0 ['ITPR3|p.S2042L|1|0.39|ENSG00000096433|chr6:33687275-33687275|C/T|missense_variant'] 21968 22871 ESEKKFQKRLQ True NCI_RA007_Epitope_Rep5 1419.78341223019 1419.78175490379 95.192 3 -1.1321336981104302 0.3547399446095993 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 112561 11425 TLEHFKRWLQP True NCI_RA007_Epitope_Rep2 1453.7830183073697 1453.78192993586 49.032 2 -1.1321592855257994 0.3547399446095993 1.0 ['ENSG00000128891|ENST00000416810|CCDC32', 'nc|ENSG00000128891|Q9BV29-2|CCDC32'] 124809 7798 VHGNITPENI True PC9_epitope_Rep3 1092.5563724174801 1092.55526993586 34.988 2 -1.1322274129510557 0.354748142031379 1.0 ['ENSG00000136021|ENST00000360820|SCYL2'] 95062 23584 RTSVTRRRSRS True PC9_epitope_Rep5 1360.77597586432 1360.77433490379 95.697 3 -1.1322643933284018 0.3547518325139424 1.0 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2'] 46883 10786 ITLITELCER True NCI_RA007_Epitope_Rep1 1189.63765951329 1189.63656993586 45.95 2 -1.1322685848000071 0.3547518325139424 1.0 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000553629.5_1_14:24035015-24036984:-|nuORF', 'ENST00000557619.5_1_14:24035015-24036327:-|nuORF', 'ENST00000556743.5_1_14:24034808-24036327:-|nuORF', 'ENST00000460049.6_1_14:24033375-24036327:-|nuORF'] 34738 9287 GQERQGAE True PC9_epitope_Rep3 873.3940581196498 873.39296993586 40.664 2 -1.132323095304851 0.3547854366218654 1.0 ['ENST00000533088.1_1_8:145703814-145715574:+|nuORF'] 127791 14699 VPDSLKEDR True PC9_epitope_Rep4 1057.54038800017 1057.53928993586 64.475 2 -1.1324006628537346 0.35484444670282905 1.0 ['ENST00000496389.5_1_3:112738423-112780791:+|nuORF'] 30068 15878 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6171499358602 73.354 2 -1.1324660549632077 0.3548653455284553 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.A597T|1|0.37|ENSG00000151348|chr11:44232479-44232479|G/A|missense_variant'] 140503 14436 YRLLTAGT True PC9_epitope_Rep4 893.49706663621 893.49596993586 63.436 2 -1.1325264675233484 0.3549116500044461 1.0 ['ENSG00000225830|ENST00000355832|ERCC6'] 11457 16015 DFDKQRYFRA True NCI_RA007_Epitope_Rep2 1344.65748344108 1344.65638993586 67.012 2 -1.1325566567750704 0.35491533605172565 1.0 ['ENSG00000156414|ENST00000409874|TDRD9', 'nc|ENSG00000156414|Q8NDG6-2|TDRD9'] 65148 13890 LQNRRLFQSLH True PC9_epitope_Rep6 1410.7844152896998 1410.7833099358602 65.265 2 -1.1325576175537375 0.35491533605172565 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 71792 9057 MEGLECHVF True H1975_Epitope_Rep2 1063.44668793947 1063.4455899358602 39.791 2 -1.1325754072972436 0.35494442680215943 1.0 ['ENSG00000064703|ENST00000369702|DDX20'] 134539 19283 VYRLIKGRK True PC9_epitope_Rep2 1131.7240468792697 1131.72241490379 79.546 3 -1.1326176270516233 0.35494442680215943 1.0 ['ENSG00000078061|ENST00000377045|ARAF', 'nc|ENSG00000078061|P10398-2|ARAF'] 127824 18334 VPERLEGKV True PC9_epitope_Rep5 1025.5869442697697 1025.58584993586 75.536 2 -1.1327269560770088 0.3549780250489038 1.0 ['ENSG00000244405|ENST00000306376|ETV5', 'nc|ENSG00000244405|P41161-2|ETV5'] 120994 9867 VEPRWRPPRD True H1975_Epitope_Rep1 1306.6894522756998 1306.68781490379 42.886 3 -1.1328596413500494 0.3550497288096841 1.0 ['ENST00000472949.1_2_13:77589696-77601209:-|nuORF'] 32917 14210 GHYDARAR True NCI_RA007_Epitope_Rep5 944.45766143572 944.45656993586 61.349 2 -1.1329690713072107 0.3551087287877248 1.0 ['ENST00000462171.1_1_1:20076843-20097914:-|nuORF', 'nc|ENSG00000162542|Q5TGY1-2|TMCO4', 'ENSG00000162542|ENST00000294543|TMCO4'] 122158 17899 VGAGLGES True H1975_Epitope_Rep1 688.33916901248 688.3386249679301 74.543 1 -1.1330018825393993 0.3551115796425895 1.0 ['ENST00000490689.3_1_3:157815429-157815600:-|nuORF'] 13216 10430 DLSKHNNHMAK True NCI_RA007_Epitope_Rep2 1293.62480341381 1293.62370993586 45.163 2 -1.13304877619451 0.3551115796425895 1.0 ['ENSG00000104879|ENST00000221476|CKM'] 80903 4144 PHYGFWVI True PC9_epitope_Rep4 1017.5072373970899 1017.50614993586 22.268 2 -1.1330644614974308 0.3551115796425895 1.0 ['ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 112241 3992 TKQLGAHL True NCI_RA007_Epitope_Rep4 866.4974009893799 866.49630993586 21.607 2 -1.1330696432447083 0.3551115796425895 1.0 ['ENST00000489338.6_1_6:88125312-88173965:+|nuORF', 'ENSG00000272514|ENST00000369562|CFAP206', 'ENST00000296885.7_1_6:88117749-88144792:+|nuORF'] 83099 8407 PSPFPEVWHTM True PC9_epitope_Rep5 1326.6066937381797 1326.60505490379 37.278 3 -1.1330872083728531 0.3551115796425895 1.0 ['ENST00000469098.1_1_2:37594344-37599967:+|nuORF', 'nc|ENSG00000115828|Q16769-2|QPCT', 'ENSG00000115828|ENST00000338415|QPCT'] 70387 15156 LVTEDVLK True H1975_Epitope_Rep1 915.5276980581499 915.5271449679301 63.557 1 -1.1331610054021024 0.35511977036604264 1.0 ['nc|ENSG00000203995|Q6WRX3-2|ZYG11A', 'ENSG00000203995|ENST00000371528|ZYG11A'] 72156 6479 MFWAMYYLLRY True PC9_epitope_Rep3 1555.73559973275 1555.7339549037902 29.947 3 -1.1331828565079571 0.3551279608814377 1.0 ['CYP7B1|p.H311Y|1|0.35|ENSG00000172817|chr8:64615152-64615152|G/A|missense_variant'] 34395 25732 GPGPGGGR True H1975_Epitope_Rep2 653.32452200785 653.3239749679301 105.65 1 -1.1331856754519054 0.3551361511887828 1.0 ['ENSG00000125878|ENST00000246080|TCF15'] 91611 23692 RIMKMRKTLS True NCI_RA007_Epitope_Rep4 1262.7315174118198 1262.73040993586 102.75 2 -1.1333024873322661 0.35518279132963393 1.0 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 32396 16950 GFPTPLGS True H1975_Epitope_Rep1 774.39120458534 774.39065496793 70.618 1 -1.1333420112960044 0.35518279132963393 1.0 ['ENST00000382361.7_1_7:5645159-5645399:+|nuORF'] 84794 17434 QDYGPCDP True NCI_RA007_Epitope_Rep2 893.3225329721699 893.32142993586 72.552 2 -1.1333894850724402 0.35518279132963393 1.0 ['ENSG00000113905|ENST00000232003|HRG'] 64001 15553 LNWWRRRKART True H1975_Epitope_Rep3 1541.8803813632098 1541.87928993586 65.243 2 -1.1334508610430072 0.35518279132963393 1.0 ['ENSG00000171714|ENST00000324559|ANO5'] 54161 15764 KVRFLKLKK True NCI_RA007_Epitope_Rep4 1158.7964835435398 1158.79483490379 68.461 3 -1.1334886997199174 0.35518279132963393 1.0 ['nc|ENSG00000154258|Q8IUA7-4|ABCA9', 'nc|ENSG00000154258|Q8IUA7-3|ABCA9', 'ABCA9|p.G1473Afs*4|1|0.35|ENSG00000154258|chr17:68984137-68984137|C/-|frameshift_variant', 'ENSG00000154258|ENST00000340001|ABCA9'] 5260 14269 ALPRTSSDPV True PC9_epitope_Rep5 1041.54547338061 1041.54436993586 59.889 2 -1.133507107012065 0.35518279132963393 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A', 'ENST00000595681.5_1_19:6754625-6763810:-|nuORF'] 133386 15360 VVVHSVTPSL True PC9_epitope_Rep4 1036.59169529704 1036.5905899358602 67.014 2 -1.133513144762904 0.35518279132963393 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 9407 14109 AVTEELPLAA True PC9_epitope_Rep3 1012.5440763982798 1012.54296993586 59.356 2 -1.1335261609624092 0.35518279132963393 1.0 ['ENST00000371370.7_1_1:54412125-54413474:+|nuORF', 'ENST00000444987.1_1_1:54412101-54413539:+|nuORF'] 123748 21627 VGRHQERR True PC9_epitope_Rep6 1036.5638578397597 1036.5632749679298 96.072 1 -1.1335518191402525 0.35518279132963393 1.0 ['ENST00000505764.5_1_4:156680186-156693798:+|nuORF'] 85832 12064 QHEESVVP True PC9_epitope_Rep5 923.4348603024698 923.43376993586 51.399 2 -1.133565654941231 0.35518279132963393 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10', 'nc|ENSG00000170325|Q9NQV6-2|PRDM10', 'nc|ENSG00000170325|Q9NQV6-1|PRDM10', 'nc|ENSG00000170325|Q9NQV6-5|PRDM10'] 101451 8967 SLKYECRPEYY True PC9_epitope_Rep1 1449.6598515098501 1449.6587499358602 39.337 2 -1.1335851828612056 0.35518279132963393 1.0 ['ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF', 'nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1'] 107683 4542 SVRGWKPR True NCI_RA007_Epitope_Rep4 984.5617325814399 984.56062993586 23.873 2 -1.133624463968517 0.35518279132963393 1.0 ['nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 119913 6263 VDKYSGRNK True NCI_RA007_Epitope_Rep2 1065.55670677065 1065.55560993586 28.966 2 -1.1336254623793216 0.35518279132963393 1.0 ['ENSG00000134569|ENST00000378623|LRP4'] 84474 5510 QAKEIIRDRQ True NCI_RA007_Epitope_Rep4 1255.6996826062298 1255.69804490379 27.786 3 -1.1336600910521193 0.35518279132963393 1.0 ['ENSG00000151575|ENST00000696102|TEX9'] 34473 9347 GPLEDLQRLP True PC9_epitope_Rep1 1136.61897267404 1136.6178699358602 40.81 2 -1.1336754387439971 0.35518279132963393 1.0 ['ENSG00000178685|ENST00000313028|PARP10'] 37246 9383 GVRISSFP True PC9_epitope_Rep5 861.4708518883699 861.46974993586 41.046 2 -1.1337494540276012 0.3552155418703574 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK'] 129976 21780 VRVRGSGV True PC9_epitope_Rep4 828.4929843152798 828.49188993586 91.971 2 -1.1337694990316445 0.3552155418703574 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 136655 7107 WWRRRWTRSQW True NCI_RA007_Epitope_Rep2 1702.8705449554998 1702.86944993586 32.264 2 -1.1337745323185462 0.3552155418703574 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 17454 4975 EHEVRLSP True H1975_Epitope_Rep2 965.4930438849299 965.49194993586 24.219 2 -1.133815654655156 0.3552155418703574 1.0 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF', 'ENST00000564808.6_1_16:19125342-19138551:+|nuORF'] 123587 19654 VGPVKGVF True PC9_epitope_Rep1 801.4748746396499 801.47376993586 80.423 2 -1.1338386781328182 0.35523642643100206 1.0 ['NFRKB|p.I1153Sfs*38|1|0.31|ENSG00000170322|chr11:129869569-129869569|G/-|frameshift_variant', 'nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 13158 5574 DLRLQEYMKMM True NCI_RA007_Epitope_Rep1 1456.68766356416 1456.6860149037902 25.748 3 -1.1339336284606791 0.3552781939612484 1.0 ['ABCA12|p.H1097Q|1|0.6|ENSG00000144452|chr2:214997698-214997698|A/T|missense_variant'] 35844 13024 GTLSGWILSK True NCI_RA007_Epitope_Rep5 1060.59169529704 1060.5905899358602 56.774 2 -1.1339367595030683 0.3552781939612484 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 110033 18600 TEKNAEEHCF True PC9_epitope_Rep1 1206.49753721202 1206.49642993586 76.332 2 -1.13404643540698 0.3552818689690198 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 6016 13052 APKCTRCLI True PC9_epitope_Rep3 1003.5306923469499 1003.52958993586 55.232 2 -1.134051341442169 0.3552818689690198 1.0 ['ENSG00000124444|ENST00000336564|ZNF576'] 127068 6535 VLSTDYANSYR True NCI_RA007_Epitope_Rep2 1287.60953018915 1287.6084299358602 30.031 2 -1.1340882434020003 0.35529005472251496 1.0 ['ENSG00000138161|ENST00000392790|CUZD1', 'CUZD1|p.L418Ffs*10|1|0.45|ENSG00000138161|chr10:122834834-122834835|-/A|frameshift_variant'] 13580 7053 DPENEAHRKQV True H1975_Epitope_Rep3 1321.63747627249 1321.63636993586 32.094 2 -1.1341029940723908 0.3552937292891332 1.0 ['ENST00000403721.5_1_2:55494731-55496348:-|nuORF'] 47194 4999 ITYWLNRDR True PC9_epitope_Rep4 1235.64110510095 1235.63944490379 25.846 3 -1.1341180920200393 0.3552937292891332 1.0 ['ENSG00000119147|ENST00000238044|ECRG4'] 29249 13248 FTWNSELKRHK True NCI_RA007_Epitope_Rep1 1444.75753183552 1444.75642993586 55.532 2 -1.1341279767057624 0.3553019145802651 1.0 ['ENSG00000103343|ENST00000268655|ZNF174'] 8552 5826 ATVDSEKFSTY True H1975_Epitope_Rep3 1246.5717476981 1246.57064993586 27.43 2 -1.1342467911873333 0.35531744721908365 1.0 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 127058 15103 VLSSAGFEAI True PC9_epitope_Rep1 992.51786165044 992.51676993586 62.912 2 -1.134292726531591 0.35531744721908365 1.0 ['nc|ENSG00000177752|Q8N8F6-2|YIPF7'] 16707 11838 EERTRVST True PC9_epitope_Rep3 976.4937721609199 976.49266993586 50.554 2 -1.1343049884315572 0.35531744721908365 1.0 ['ENSG00000102543|ENST00000251108|CDADC1', 'nc|ENSG00000102543|Q9BWV3-2|CDADC1', 'ENST00000466868.1_1_13:49822131-49841632:+|nuORF', 'nc|ENSG00000102543|Q9BWV3-3|CDADC1'] 31237 7117 GDEAISEYK True H1975_Epitope_Rep3 1010.4556553167 1010.45454993586 32.346 2 -1.1343086211123776 0.35531744721908365 1.0 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 55710 13558 LALINHPEL True H1975_Epitope_Rep2 1018.58113061334 1018.58002993586 57.288 2 -1.1343126833785233 0.35531744721908365 1.0 ['ENSG00000176922|ENST00000322101|OR51S1'] 81095 22947 PITVRVHCPIP True NCI_RA007_Epitope_Rep5 1230.6906981456598 1230.68905490379 95.492 3 -1.1344499531674694 0.35535102196267615 1.0 ['PCDHGB2|p.K734Sfs*35|1|0.21|ENSG00000253910|chr5:141362333-141362333|C/-|frameshift_variant'] 66176 6604 LSEQVLETFHD True NCI_RA007_Epitope_Rep1 1316.62484590012 1316.6237499358601 29.701 2 -1.134487611177706 0.3553546945615193 1.0 ['COL6A3|p.L1816F|1|0.04|ENSG00000163359|chr2:237366739-237366739|C/A|missense_variant'] 19926 13835 ELVERVSAI True PC9_epitope_Rep5 1014.5709598524599 1014.56986993586 58.236 2 -1.1344897685542048 0.3553546945615193 1.0 ['CAMKK1|p.A21S|1|0.29|ENSG00000004660|chr17:3885627-3885627|C/A|missense_variant'] 112763 13589 TLHPAPSPSL True PC9_epitope_Rep5 1018.54474510462 1018.54364993586 57.292 2 -1.1345586154886338 0.3553837560616447 1.0 ['ENSG00000131746|ENST00000254051|TNS4'] 86160 6579 QIEAVLLNS True PC9_epitope_Rep2 985.54441075145 985.54330993586 30.719 2 -1.134579841103241 0.3553837560616447 1.0 ['ENSG00000118971|ENST00000261254|CCND2'] 54075 25118 KVLAIALVL True PC9_epitope_Rep2 938.6528390016199 938.65174993586 102.28 2 -1.1346382430896975 0.3554300222151698 1.0 ['MEGF8|p.M9I|1|0.24|ENSG00000105429|chr19:42326270-42326270|G/T|missense_variant'] 128467 7245 VPSGNYYNI True PC9_epitope_Rep5 1025.48181049489 1025.4807099358602 32.831 2 -1.134677855402793 0.35544638663569317 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000513216.5_3_4:68338325-68358532:-|nuORF'] 38387 10085 HELLLTVLWY True H1975_Epitope_Rep3 1285.7070594024499 1285.7059699358601 43.831 2 -1.1347158633089818 0.35544638663569317 1.0 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENSG00000134444|ENST00000644646|RELCH', 'nc|ENSG00000134444|Q9P260-2|RELCH'] 124646 22407 VGWSLLCK True PC9_epitope_Rep4 904.4840594243599 904.4835149679301 94.42 1 -1.134797982036337 0.35549265023229837 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant', 'ENST00000474202.1_1_12:40619397-40626186:+|nuORF'] 65452 25274 LRILLVLKPI True PC9_epitope_Rep3 1176.83220034592 1176.83056490379 102.62 3 -1.1348449312171447 0.3555090124397055 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 45105 19478 IPLIERLQRN True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74426490379 81.808 3 -1.134855589971579 0.3555090124397055 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 114942 4573 TQTHNKSI True PC9_epitope_Rep2 927.47739382079 927.47628993586 22.958 2 -1.134880169628838 0.35551719323187064 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3'] 127383 12183 VNDVLYLEWDQ True H1975_Epitope_Rep1 1392.6561460284 1392.65504993586 51.881 2 -1.1350055299125419 0.3555843265679144 1.0 ['NUP214|p.D833Y|1|0.44|ENSG00000126883|chr9:131159443-131159443|G/T|missense_variant'] 16523 13032 EELLRKTK True PC9_epitope_Rep2 1015.6025943339099 1015.60148993586 55.409 2 -1.1350224782446219 0.3555843265679144 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 32987 11870 GIFNSLWF True PC9_epitope_Rep3 982.4912529797799 982.49014993586 50.677 2 -1.1350513051063877 0.35559165852234503 1.0 ['GRIA3|p.S817Rfs*3|1|0.6|ENSG00000125675|chrX:123482810-123482810|C/-|frameshift_variant', 'nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3', 'ENSG00000152578|ENST00000282499|GRIA4', 'nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2', 'nc|ENSG00000155511|P42261-3|GRIA1', 'nc|ENSG00000155511|P42261-4|GRIA1', 'nc|ENSG00000155511|P42261-2|GRIA1', 'ENSG00000155511|ENST00000285900|GRIA1', 'nc|ENSG00000155511|P42261-6|GRIA1', 'nc|ENSG00000155511|P42261-5|GRIA1', 'ENST00000481559.6_1_5:152869375-153085697:+|nuORF'] 62755 24490 LLLPMPMLLI True NCI_RA007_Epitope_Rep2 1152.70144607016 1152.7008749679298 102.88 1 -1.1351029893833209 0.35559165852234503 1.0 ['ENSG00000186881|ENST00000334726|OR13F1'] 88943 12969 QVGRQLAI True PC9_epitope_Rep4 883.5239500903898 883.52284993586 57.778 2 -1.1351286746025706 0.35559165852234503 1.0 ['ENSG00000030110|ENST00000374467|BAK1', 'nc|ENSG00000030110|Q16611-2|BAK1'] 84793 17974 QDYFRKFRRRK True NCI_RA007_Epitope_Rep2 1598.8906116937399 1598.8895099358601 74.655 2 -1.135129682672272 0.35559165852234503 1.0 ['nc|ENSG00000102001|O60840-5|CACNA1F', 'nc|ENSG00000102001|O60840-7|CACNA1F', 'nc|ENSG00000102001|O60840-4|CACNA1F', 'nc|ENSG00000102001|O60840-6|CACNA1F', 'ENSG00000102001|ENST00000323022|CACNA1F', 'nc|ENSG00000102001|O60840|CACNA1F'] 65451 23584 LRILLVLKPI True NCI_RA007_Epitope_Rep4 1176.83220034592 1176.83056490379 102.31 3 -1.135153170377958 0.3555944765966088 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 65450 23618 LRILLVLKPI True NCI_RA007_Epitope_Rep3 1176.83220034592 1176.83056490379 102.43 3 -1.1351822952741135 0.3555944765966088 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 71509 11327 LYYVYMGLL True PC9_epitope_Rep1 1133.5831047592899 1133.58200993586 48.448 2 -1.1351967314185993 0.3555944765966088 1.0 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF', 'ENST00000533687.1_1_11:118969111-118971155:-|nuORF'] 46081 7866 ISHAGHAL True PC9_epitope_Rep3 804.4242360491199 804.42312993586 35.242 2 -1.1352254305407217 0.3555944765966088 1.0 ['ENSG00000118961|ENST00000237822|LDAH', 'nc|ENSG00000118961|Q9H6V9-2|LDAH'] 30502 8426 GAGGCRAH True H1975_Epitope_Rep3 727.3183910815899 727.31784496793 37.395 1 -1.135242398611909 0.3555944765966088 1.0 ['ENST00000531660.5_1_11:47270518-47282963:+|nuORF', 'ENST00000395397.7_1_11:47270518-47282963:+|nuORF', 'ENST00000527464.5_1_11:47270203-47282963:+|nuORF', 'ENST00000529540.5_1_11:47269870-47282963:+|nuORF'] 126747 24153 VLPGKKKKKT True NCI_RA007_Epitope_Rep4 1125.75976368165 1125.75811490379 104.72 3 -1.1352584150806881 0.35560180719833495 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 116468 15398 TTLRYWERRRS True NCI_RA007_Epitope_Rep2 1522.8116926666999 1522.8105899358602 64.595 2 -1.1352683219893096 0.35560180719833495 1.0 ['ENSG00000179058|ENST00000372478|C9orf50'] 110930 10852 TGYVLSASAV True PC9_epitope_Rep1 966.5022115862998 966.50110993586 46.628 2 -1.1353035713039614 0.35560180719833495 1.0 ['ENSG00000235863|ENST00000451237|B3GALT4'] 100004 6436 SIPVPTHYY True NCI_RA007_Epitope_Rep2 1075.5338460677501 1075.53274993586 29.642 2 -1.1353069778897527 0.35560180719833495 1.0 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 136231 21836 WRTRSLLKRKT True PC9_epitope_Rep6 1443.8786500277097 1443.87754993586 96.893 2 -1.1353892118417452 0.35563536682868635 1.0 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 22773 5346 ETWDWFSWLFL True H1975_Epitope_Rep1 1528.7027022979998 1528.70104490379 25.623 3 -1.1354593207901227 0.35566441198492366 1.0 ['nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-8|CD44'] 81644 24246 PLLLLLHH True PC9_epitope_Rep2 954.6014721351 954.60036993586 98.802 2 -1.1354624516083778 0.35566441198492366 1.0 ['PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 107027 6533 SVFPQRAQ True NCI_RA007_Epitope_Rep2 931.4875645816699 931.48646993586 30.023 2 -1.1355404344034234 0.3556680752782325 1.0 ['ENST00000458274.1_1_X:149108278-149108993:+|nuORF'] 76279 6837 NPLKLESTG True PC9_epitope_Rep2 957.51311062317 957.51200993586 31.703 2 -1.1355658452602888 0.3556680752782325 1.0 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-2|GCFC2'] 133279 17876 VVTSSIRR True NCI_RA007_Epitope_Rep4 916.54541381096 916.54430993586 77.385 2 -1.1356351790891406 0.3556754013070237 1.0 ['nc|ENSG00000143147|Q8N6U8-2|GPR161', 'ENST00000493800.1_1_1:168059784-168074118:-|nuORF', 'ENSG00000143147|ENST00000682931|GPR161', 'nc|ENSG00000143147|Q8N6U8-6|GPR161'] 5456 22563 ALVPDELLK True PC9_epitope_Rep1 996.5855472874399 996.58444993586 91.594 2 -1.135658405403139 0.3556754013070237 1.0 ['ENSG00000086015|ENST00000361297|MAST2', 'nc|ENSG00000086015|Q6P0Q8-2|MAST2'] 101936 7913 SLQAERLK True NCI_RA007_Epitope_Rep1 943.5450794577899 943.5439899358599 34.773 2 -1.1356950155618961 0.3556754013070237 1.0 ['ENSG00000196233|ENST00000421806|LCOR'] 22670 9156 ETQAAEIW True H1975_Epitope_Rep2 946.4396113297399 946.4390649679301 40.17 1 -1.1356956276580394 0.3556754013070237 1.0 ['ENSG00000197548|ENST00000693202|ATG7', 'nc|ENSG00000197548|O95352-2|ATG7'] 10336 14011 CFDPKEDRWSL True PC9_epitope_Rep4 1394.6288857347397 1394.6272349037902 61.806 3 -1.1357154682572204 0.3556835773925843 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 46893 10542 ITLPGVKNR True NCI_RA007_Epitope_Rep2 996.60801406752 996.60690993586 45.603 2 -1.1357962388670158 0.3557044424987628 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 9922 17455 AYLPMLEKCW True H1975_Epitope_Rep1 1252.5984375536 1252.59787496793 72.626 1 -1.1358750249744314 0.35571261800832404 1.0 ['ENSG00000134107|ENST00000256495|BHLHE40'] 37329 11926 GVSEERIHL True PC9_epitope_Rep4 1038.5458077337798 1038.54470993586 53.658 2 -1.1359252320492803 0.35572275016811095 1.0 ['nc|ENSG00000149636|Q9H410-4|DSN1', 'ENSG00000149636|ENST00000373750|DSN1'] 28233 20587 FRKGGGAC True PC9_epitope_Rep6 794.3857423654198 794.38464993586 91.918 2 -1.1359807547794492 0.35572275016811095 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33'] 42660 17184 IEHRKELRP True H1975_Epitope_Rep2 1176.6727395823998 1176.6716499358602 71.388 2 -1.1360166756880445 0.35572275016811095 1.0 ['RGS22|p.G1112R|1|0.09|ENSG00000132554|chr8:99981963-99981963|C/T|missense_variant'] 100800 12533 SLEHLEQLAQY True H1975_Epitope_Rep1 1329.65648038157 1329.65538993586 53.252 2 -1.1360488586369701 0.35572275016811095 1.0 ['ENSG00000186150|ENST00000334179|UBL4B'] 20730 20508 EQERNEFVRQL True H1975_Epitope_Rep3 1446.72154024962 1446.7204499358602 85.725 2 -1.1360604130615561 0.35572275016811095 1.0 ['ENSG00000179933|ENST00000319074|C14orf119'] 68867 9269 LTMVCRPA True PC9_epitope_Rep2 889.4513793970899 889.45028993586 40.992 2 -1.1360667312758246 0.35572275016811095 1.0 ['ENST00000451956.1_1_3:50290513-50293631:+|nuORF'] 79700 10248 PDSRIRVCLYF True H1975_Epitope_Rep1 1367.70199110535 1367.70088993586 44.363 2 -1.1360669590203634 0.35572275016811095 1.0 ['ENST00000517342.1_1_8:57389817-57390279:-|nuORF'] 19372 8678 ELLREKVNL True NCI_RA007_Epitope_Rep3 1112.65535818276 1112.6542699358602 41.215 2 -1.136077846941823 0.35572275016811095 1.0 ['nc|ENSG00000061337|Q9Y250-3|LZTS1', 'nc|ENSG00000061337|Q9Y250-2|LZTS1', 'ENSG00000061337|ENST00000381569|LZTS1'] 106086 9002 STATQQELRAK True NCI_RA007_Epitope_Rep5 1231.6520637074698 1231.65096993586 41.283 2 -1.1360822281580838 0.35572275016811095 1.0 ['nc|ENSG00000133392|P35749-4|MYH11', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 47034 13916 ITRNMNSNIKN True H1975_Epitope_Rep1 1303.6666682257899 1303.66556993586 58.68 2 -1.1361388674502064 0.35573092440813014 1.0 ['RAD51AP2|p.T557S|1|0.49|ENSG00000214842|chr2:17516747-17516747|T/A|missense_variant'] 111569 8075 TIAYLTPSFEF True NCI_RA007_Epitope_Rep2 1287.63870505911 1287.6376099358602 36.043 2 -1.1361973542526718 0.35575910584474074 1.0 ['MGST1|p.L125Sfs*22|1|0.04|ENSG00000008394|chr12:16363945-16363961|CCTTCCCCAGCCAAATA/-|frameshift_variant'] 105820 14455 SSLETFLVK True NCI_RA007_Epitope_Rep1 1022.5648118428599 1022.56370993586 60.272 2 -1.1362165948878562 0.35575910584474074 1.0 ['ENST00000543605.5_1_20:44987233-44987329:-|nuORF'] 92744 24258 RPAAAAAAAAA True PC9_epitope_Rep1 910.4984636185399 910.49736993586 98.128 2 -1.1362459643521152 0.35575910584474074 1.0 ['ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 52652 19140 KLSKPVYL True PC9_epitope_Rep5 946.5851533646198 946.58404993586 78.657 2 -1.136254545677598 0.35575910584474074 1.0 ['ENSG00000102897|ENST00000567954|LYRM1'] 46425 5760 ISSSNLYP True PC9_epitope_Rep5 879.43379767331 879.43270993586 27.15 2 -1.136261643506618 0.35575910584474074 1.0 ['ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 4971 11472 ALGRWAWPRR True NCI_RA007_Epitope_Rep5 1267.70504277019 1267.70394993586 50.777 2 -1.1363211005898814 0.3557672790013194 1.0 ['ENST00000521871.5_1_2:73496869-73511371:-|nuORF'] 105752 8073 SSGERWIRY True H1975_Epitope_Rep3 1152.5676058075198 1152.56650993586 36.027 2 -1.1363401556151425 0.3557881382810022 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 60263 13311 LGRGRNSN True PC9_epitope_Rep6 872.45766143572 872.45656993586 62.857 2 -1.136349361066568 0.35579631086189833 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2'] 33206 18942 GKAGVQWHNL True PC9_epitope_Rep1 1108.5777765684002 1108.57666993586 77.644 2 -1.136371302842085 0.3558171692440407 1.0 ['nc|ENSG00000260314|P22897-2|MRC1'] 123604 12709 VGQESPSALP True PC9_epitope_Rep6 983.4923751785899 983.49126993586 60.363 2 -1.1363995814982617 0.3558289991120132 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF'] 105944 14392 SSSGGGGS True NCI_RA007_Epitope_Rep5 594.2245331830601 594.22398496793 62.041 1 -1.1364035553216278 0.3558289991120132 1.0 ['ENSG00000167470|ENST00000682408|MIDN', 'nc|ENSG00000167470|Q504T8|MIDN', 'SALL1|p.S166F|1|0.23|ENSG00000103449|chr16:51141725-51141725|G/A|missense_variant', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'ENSG00000140948|ENST00000671377|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14', 'ENSG00000174282|ENST00000380599|ZBTB4'] 79638 19822 PDNILNFVK True PC9_epitope_Rep2 1058.5760452329 1058.57494993586 81.635 2 -1.1364168132001014 0.3558289991120132 1.0 ['ENSG00000168758|ENST00000305476|SEMA4C'] 105414 17527 SRSPHKRKRN True NCI_RA007_Epitope_Rep4 1264.72248373948 1264.72138993586 75.867 2 -1.1364304544350647 0.35583631428064033 1.0 ['ENSG00000168566|ENST00000342415|SNRNP48'] 63517 14517 LLYIPPTH True H1975_Epitope_Rep2 952.5382031722002 952.53710993586 60.998 2 -1.1364485763457863 0.35583631428064033 1.0 ['nc|ENSG00000162139|Q9UQ49|NEU3', 'ENSG00000162139|ENST00000294064|NEU3'] 14493 3963 DTHLWYFVIP True H1975_Epitope_Rep3 1289.6444591458899 1289.64280490379 20.372 3 -1.1364486424300857 0.35583631428064033 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 127626 8109 VPAAGGGG True H1975_Epitope_Rep3 584.2918248972401 584.29127496793 36.167 1 -1.1364806717926148 0.35583631428064033 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 61672 20351 LKSDLFLKHKR True H1975_Epitope_Rep2 1383.83505388023 1383.83341490379 84.339 3 -1.136556947644486 0.3558571700386884 1.0 ['nc|ENSG00000148908|O43665-2|RGS10', 'nc|ENSG00000148908|O43665-1|RGS10', 'ENSG00000148908|ENST00000369103|RGS10'] 102514 7565 SLVNREQLMPH True H1975_Epitope_Rep1 1322.6765046335 1322.6754099358602 34.089 2 -1.136622800980432 0.3558644833140958 1.0 ['ENSG00000221955|ENST00000469902|SLC12A8', 'nc|ENSG00000221955|A0AV02-5|SLC12A8', 'nc|ENSG00000221955|A0AV02-4|SLC12A8', 'ENST00000479352.5_1_3:124802736-124844777:-|nuORF', 'ENST00000473262.5_1_3:124802736-124896678:-|nuORF', 'nc|ENSG00000221955|A0AV02-2|SLC12A8', 'nc|ENSG00000221955|A0AV02-3|SLC12A8'] 11259 6412 DEFRSFFQFLN True H1975_Epitope_Rep1 1448.6724647988797 1448.6708249037902 29.722 3 -1.1366301791604443 0.3558644833140958 1.0 ['ENSG00000155970|ENST00000318063|MICU3'] 34083 18203 GLWRDLLFL True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 75.325 2 -1.1366352472659613 0.3558644833140958 1.0 ['ENST00000392619.1_3_17:72608517-72608742:-|nuORF'] 80430 24862 PGKPKADAK True NCI_RA007_Epitope_Rep5 910.5236157372199 910.52250993586 103.12 2 -1.136648087450951 0.3558644833140958 1.0 ['ENSG00000178764|ENST00000314393|ZHX2'] 66179 12175 LSEQVPGTAL True H1975_Epitope_Rep1 1013.5393253710099 1013.53822993586 51.85 2 -1.1367573614276014 0.3559107052257737 1.0 ['nc|ENSG00000177427|Q96C03-2|MIEF2'] 13039 19899 DLNSEREYLE True H1975_Epitope_Rep2 1266.5728103272597 1266.57170993586 82.525 2 -1.1367993861713697 0.3559188746971753 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.M2050Ifs*24|1|0.12|ENSG00000163092|chr2:167248067-167248067|G/-|frameshift_variant', 'XIRP2|p.R1098Ffs*7|1|0.04|ENSG00000163092|chr2:167245207-167245222|TAAGAAAGGGGTGCTT/-|frameshift_variant', 'XIRP2|p.A1392Lfs*11|1|0.36|ENSG00000163092|chr2:167246090-167246090|G/-|frameshift_variant', 'XIRP2|p.G1535Vfs*41|1|0.22|ENSG00000163092|chr2:167246520-167246520|G/-|frameshift_variant', 'XIRP2|p.R1900Efs*5|1|0.1|ENSG00000163092|chr2:167247612-167247612|C/-|frameshift_variant', 'XIRP2|p.G695Vfs*18|1|0.12|ENSG00000163092|chr2:167244000-167244000|G/-|frameshift_variant', 'XIRP2|p.G397Efs*43|1|0.1|ENSG00000163092|chr2:167243105-167243105|G/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 121605 8596 VFFLQFLDWWY True H1975_Epitope_Rep1 1562.7598232512998 1562.7587299358602 37.993 2 -1.1368333607619816 0.3559270439613404 1.0 ['ENSG00000108733|ENST00000225873|PEX12'] 46297 5571 ISQDVKLE True PC9_epitope_Rep6 930.5022115863 930.50110993586 29.47 2 -1.136870228891773 0.3559425215924512 1.0 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000486282.6_1_1:110163774-110168851:+|nuORF'] 29972 25610 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 106.05 3 -1.1368871033797396 0.3559425215924512 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 76109 1921 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 10.552 3 -1.1369122081983052 0.3559425215924512 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 37308 17445 GVSAWITINF True PC9_epitope_Rep6 1106.5760452329 1106.57494993586 79.719 2 -1.136914142805289 0.3559425215924512 1.0 ['nc|ENSG00000197586|O75354-2|ENTPD6', 'nc|ENSG00000197586|O75354-3|ENTPD6', 'ENSG00000197586|ENST00000376652|ENTPD6'] 129612 25614 VRPAIPGGG True PC9_epitope_Rep3 822.4711862415398 822.47008993586 104.02 2 -1.1369284709312464 0.3559425215924512 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 126724 24852 VLPGKKKKKT True H1975_Epitope_Rep3 1125.75976368165 1125.75811490379 103.37 3 -1.1369776050875413 0.35594982942511827 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 80475 4529 PGLHSRPPP True PC9_epitope_Rep4 956.5191990631199 956.51810993586 23.909 2 -1.1369829571445316 0.35594982942511827 1.0 ['AMER1|p.P880S|1|0.06|ENSG00000184675|chrX:64190649-64190649|G/A|missense_variant'] 31745 7729 GEHFLFMY True H1975_Epitope_Rep3 1042.45823859934 1042.4571499358601 34.712 2 -1.1369862358875569 0.35594982942511827 1.0 ['ENSG00000105538|ENST00000222145|RASIP1'] 36466 13969 GVGGILKD True PC9_epitope_Rep4 757.43340375049 757.4328549679301 61.636 1 -1.137038741224226 0.35594982942511827 1.0 ['ENST00000252032.9_1_20:3232842-3233022:-|nuORF'] 70213 8580 LVQIPIFFFTV True NCI_RA007_Epitope_Rep2 1322.7638460025798 1322.76274993586 38.018 2 -1.137043147542546 0.35595799726069094 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 66085 6682 LSEKNVCKIYL True H1975_Epitope_Rep1 1308.7111588067198 1308.71006993586 30.755 2 -1.1371324090800488 0.35603687687840013 1.0 ['ENSG00000187187|ENST00000347077|ZNF546'] 89804 26466 RALLKRRRPR True PC9_epitope_Rep2 1320.86908840352 1320.8674349037901 108.24 3 -1.1372035714712263 0.35603687687840013 1.0 ['nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 86267 10918 QIQNENLLLRQ True PC9_epitope_Rep5 1367.75211210191 1367.75100993586 46.986 2 -1.137221510658134 0.35603687687840013 1.0 ['ENST00000566201.6_1_16:46508202-46534771:-|nuORF', 'ENST00000571006.5_1_16:46521999-46540142:-|nuORF'] 83486 13028 PTPWLPSF True NCI_RA007_Epitope_Rep5 943.4803539429099 943.47924993586 56.789 2 -1.1372623854924515 0.35603687687840013 1.0 ['ENST00000474961.5_1_6:31498060-31498156:-|nuORF'] 91643 22062 RIRKHLGLTS True PC9_epitope_Rep6 1179.7200241279897 1179.71836490379 97.795 3 -1.1372667082680896 0.35603687687840013 1.0 ['ENST00000466122.5_1_21:42622694-42622781:+|nuORF'] 73109 13292 MRKQAVSDL True PC9_epitope_Rep1 1046.5542642424998 1046.55316993586 55.992 2 -1.1373269632345815 0.35607040503182935 1.0 ['nc|ENSG00000122432|Q5VX52|SPATA1'] 101449 6958 SLKYECRPEYY True NCI_RA007_Epitope_Rep1 1449.6598515098501 1449.6587499358602 31.07 2 -1.1373557134593553 0.3561039323349269 1.0 ['ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF', 'nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1'] 70085 11041 LVNVLQVP True PC9_epitope_Rep2 880.5382031721998 880.53710993586 47.788 2 -1.137440602218119 0.35612477808775045 1.0 ['ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 117059 5162 TVIESSPESPV True H1975_Epitope_Rep3 1143.56593404167 1143.5648299358602 24.958 2 -1.1374585399819865 0.3561365913039068 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 59599 10706 LFVRLCLLR True PC9_epitope_Rep6 1131.6950552501098 1131.69340490379 51.991 3 -1.1374747078223462 0.3561365913039068 1.0 ['ENST00000296257.9_1_3:185347643-185347886:+|nuORF'] 81692 16130 PLLVSGIG True PC9_epitope_Rep2 754.45889022234 754.4583449679301 67.301 1 -1.1374946810061874 0.3561365913039068 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF'] 78947 18074 PAHAPSSS True H1975_Epitope_Rep3 752.3453170220802 752.34420993586 75.717 2 -1.1375094373271841 0.3561529195460597 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5'] 28802 20332 FSVFFQKV True PC9_epitope_Rep2 1000.5382031721999 1000.53710993586 83.629 2 -1.1375444947940971 0.3561529195460597 1.0 ['ENST00000512669.1_1_4:1836565-1841051:-|nuORF', 'ENST00000505551.5_1_4:1836565-1844755:-|nuORF', 'ENST00000466175.5_1_4:1836565-1857677:-|nuORF'] 98514 20098 SFLQSRGEVI True PC9_epitope_Rep1 1134.6033226098998 1134.6022299358601 82.135 2 -1.137565203159425 0.35616108335657953 1.0 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'nc|ENSG00000166473|Q7Z442-4|PKD1L2', 'ENST00000299598.11_1_16:81199358-81222588:-|nuORF', 'nc|ENSG00000166473|Q7Z442-3|PKD1L2', 'ENST00000533478.5_1_16:81174978-81214887:-|nuORF', 'nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 138884 15314 YKGHELIFF True PC9_epitope_Rep4 1152.59678067748 1152.59568993586 66.838 2 -1.137656111623472 0.356194606109019 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|211|3|anti-sense'] 56652 12876 LDIQMGTL True PC9_epitope_Rep5 889.45790424617 889.45680993586 54.537 2 -1.1377516283566433 0.35624809818440006 1.0 ['MASP2|p.R498Q|1|0.05|ENSG00000009724|chr1:11027453-11027453|C/T|missense_variant'] 128453 8075 VPSEDTHSTRA True H1975_Epitope_Rep2 1198.5578289694602 1198.5567299358602 36.008 2 -1.137765858796124 0.35624809818440006 1.0 ['ENST00000335312.7_1_19:3631143-3631773:-|nuORF'] 110320 20707 TETEKKKKK True NCI_RA007_Epitope_Rep5 1118.6659228664598 1118.66482993586 86.612 2 -1.1377688506342587 0.35624809818440006 1.0 ['nc|ENSG00000154451|Q96PP8-2|GBP5'] 57323 7978 LEAECRLRCPR True H1975_Epitope_Rep1 1344.6754590876799 1344.67436993586 35.637 2 -1.1377703393970593 0.35624809818440006 1.0 ['ENST00000528182.5_2_11:111957606-111959624:+|nuORF', 'ENST00000528048.5_2_11:111957606-111965694:+|nuORF'] 109491 12029 TDLPSQPQL True NCI_RA007_Epitope_Rep3 997.5080252427299 997.50692993586 54.441 2 -1.1378130034808378 0.35624809818440006 1.0 ['ENSG00000133275|ENST00000255641|CSNK1G2'] 37165 22226 GVQNVLKKHQA True PC9_epitope_Rep3 1220.69895433024 1220.6978499358602 90.777 2 -1.1378477741426325 0.35626893867356385 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 15806 5594 EDDWSDWEEHP True NCI_RA007_Epitope_Rep2 1443.52150303039 1443.52040993586 26.374 2 -1.1378965405764097 0.35628890551111225 1.0 ['ENSG00000198839|ENST00000361822|ZNF277'] 46469 8200 ISVDRPVPQP True NCI_RA007_Epitope_Rep2 1106.6084079903399 1106.60730993586 36.531 2 -1.1379125663459948 0.35628890551111225 1.0 ['nc|ENSG00000092529|P20807-2|CAPN3'] 102307 11564 SLSPSQPL True PC9_epitope_Rep3 827.43888305375 827.43778993586 49.494 2 -1.137913382466577 0.35628890551111225 1.0 ['nc|ENSG00000182352|Q96MU5|CD300LD-AS1'] 110888 7870 TGSSSLPHLKK True H1975_Epitope_Rep3 1153.64552177505 1153.6444299358602 35.248 2 -1.137935248755894 0.35628890551111225 1.0 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'ENST00000496402.2_1_2:233990465-233995359:+|nuORF'] 126731 26274 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 108.73 3 -1.1379778487644174 0.35629706635563785 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 68916 11283 LTNTEIPLQLV True H1975_Epitope_Rep1 1239.7074533252699 1239.70634993586 48.377 2 -1.1380503265151773 0.3563179046387505 1.0 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 82421 10055 PPPELLNGNVK True H1975_Epitope_Rep1 1176.65027280232 1176.64916993586 43.617 2 -1.1381162479707867 0.3563260649087221 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'ENST00000466229.5_1_1:196648727-196709933:+|nuORF'] 113784 23435 TMSLLSKII True PC9_epitope_Rep5 1004.59400379616 1004.59290993586 95.125 2 -1.1381912224654762 0.3563469022958634 1.0 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 83370 10958 PTGSLLDLRE True H1975_Epitope_Rep2 1099.58733819259 1099.58624993586 47.181 2 -1.1382631417658058 0.3563505444772638 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF'] 137983 19602 YFNRFLQWKWL True PC9_epitope_Rep3 1599.8350538802297 1599.83341490379 80.636 3 -1.138269537973555 0.3563505444772638 1.0 ['ENST00000400595.3_1_13:21893667-21894339:+|nuORF', 'nc|ENSG00000198055|P43250-3|GRK6', 'ENSG00000198055|ENST00000355472|GRK6', 'nc|ENSG00000198055|P43250-2|GRK6'] 20457 14853 EPIAMTVP True PC9_epitope_Rep3 856.4364405256 856.43534993586 62.268 2 -1.138500577222503 0.35644744181329546 1.0 ['ENSG00000102879|ENST00000219150|CORO1A', 'ENST00000567034.5_1_16:30199450-30200005:+|nuORF'] 74579 16228 NGEKEQKVFSF True H1975_Epitope_Rep1 1311.6459156978697 1311.6448099358602 67.769 2 -1.1386174742098722 0.3564583597414121 1.0 ['ENSG00000224586|ENST00000412168|GPX5'] 124006 12769 VGSFDIAG True PC9_epitope_Rep6 764.37046914076 764.36936993586 60.61 2 -1.1386216864947714 0.3564583597414121 1.0 ['ENSG00000104969|ENST00000221566|SGTA'] 66779 10530 LSLRAPETVP True PC9_epitope_Rep1 1081.6131590176099 1081.61206993586 45.394 2 -1.138640393998545 0.3564583597414121 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant', 'ROS1|p.F1354Lfs*35|1|0.3|ENSG00000047936|chr6:117356708-117356708|A/-|frameshift_variant'] 83531 11069 PTTPSSVRCP True PC9_epitope_Rep4 1043.5069796969099 1043.50588993586 50.354 2 -1.1386415183288803 0.3564583597414121 1.0 ['ENST00000424457.5_1_17:39929174-39942952:-|nuORF'] 42504 12892 IEEKGVRLR True PC9_epitope_Rep5 1098.6509415086598 1098.6498499358602 54.599 2 -1.138679515700394 0.3564583597414121 1.0 ['ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF', 'ENST00000585170.1_1_17:56602431-56602611:-|nuORF', 'nc|ENSG00000108387|O43236-6|SEPTIN4'] 16981 9262 EFYEAKLQ True PC9_epitope_Rep6 1026.5022115862998 1026.50110993586 45.779 2 -1.138687120676631 0.3564583597414121 1.0 ['ENSG00000243710|ENST00000372492|CFAP57'] 110731 5809 TGGAGSKW True PC9_epitope_Rep3 762.36605246666 762.36494993586 27.414 2 -1.1387044330281115 0.35650278210831843 1.0 ['nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT', 'nc|ENSG00000198221|Q9Y6Z5|AFDN-DT'] 140722 23333 YSCEDSET True NCI_RA007_Epitope_Rep4 932.30694247768 932.30584993586 101.31 2 -1.1387483697633043 0.35650278210831843 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 27345 16340 FLSQLHLGFL True PC9_epitope_Rep2 1173.6546299067697 1173.65299490379 68.098 3 -1.138748858864368 0.35650278210831843 1.0 ['ENST00000374072.5_1_20:34287595-34288825:+|nuORF'] 6556 15262 APVAAAALA True NCI_RA007_Epitope_Rep5 753.43848913093 753.43738993586 65.397 2 -1.1387743252480742 0.35650278210831843 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 141118 17786 YSRLGVLTV True PC9_epitope_Rep4 1006.5811306133398 1006.58002993586 76.442 2 -1.1388764927731503 0.35650278210831843 1.0 ['SLC1A7|p.S85Y|1|0.31|ENSG00000162383|chr1:53114935-53114935|G/T|missense_variant'] 84740 12397 QDSLAGLVLY True PC9_epitope_Rep3 1077.57062549929 1077.5695299358601 52.714 2 -1.1388929497149796 0.35650278210831843 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 66028 18137 LSEEPILKWYK True PC9_epitope_Rep2 1404.7653025545599 1404.7642099358602 75.067 2 -1.138911099850489 0.35650278210831843 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 102906 4818 SPARQEQHGA True NCI_RA007_Epitope_Rep3 1079.5108192073899 1079.5097299358602 25.92 2 -1.1389214684211801 0.35651093817333773 1.0 ['ENST00000278071.6_1_10:106074748-106075132:-|nuORF'] 11031 8776 DASILISNVCS True H1975_Epitope_Rep1 1120.54342477528 1120.5423299358602 38.688 2 -1.1389859479604234 0.35651821246609716 1.0 ['ENSG00000161956|ENST00000321337|SENP3', 'ENST00000583277.1_1_17:7467715-7468388:+|nuORF'] 83203 13585 PSTSSAFPI True NCI_RA007_Epitope_Rep3 905.44944773745 905.4488949679301 60.735 1 -1.1389953604017362 0.35651821246609716 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 38390 5173 HELMIHCW True H1975_Epitope_Rep1 1067.46809209039 1067.46698993586 24.962 2 -1.139040872247238 0.35651821246609716 1.0 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000491885.6_1_6:111982944-111997736:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN'] 132126 6044 VTVEAEPRP True PC9_epitope_Rep2 996.5240096600398 996.52290993586 28.64 2 -1.1390446437206427 0.35651821246609716 1.0 ['ENST00000396987.7_1_8:41479703-41480342:+|nuORF'] 119889 8565 VDIAHGPPAKE True PC9_epitope_Rep1 1132.58767254576 1132.58656993586 37.783 2 -1.139132897022297 0.35656438918672295 1.0 ['PADI4|p.K60Efs*27|1|0.54|ENSG00000159339|chr1:17331050-17331051|-/A|frameshift_variant'] 18385 9116 EITFEALK True NCI_RA007_Epitope_Rep2 949.5120479940099 949.51094993586 40.065 2 -1.139328216485662 0.35659337177618655 1.0 ['nc|ENSG00000132294|Q14156-3|EFR3A', 'nc|ENSG00000132294|Q14156-2|EFR3A', 'ENSG00000132294|ENST00000254624|EFR3A'] 130470 2758 VSPGPPVLWA True H1975_Epitope_Rep2 1021.5596668927699 1021.55856993586 14.637 2 -1.1393286817052106 0.35659337177618655 1.0 ['ENST00000343916.7_1_20:61461923-61467875:+|nuORF', 'ENST00000469802.5_1_20:61464351-61467803:+|nuORF', 'ENST00000462700.5_1_20:61464351-61470045:+|nuORF'] 71195 5815 LYPDFLLS True NCI_RA007_Epitope_Rep4 966.50623433758 966.5051299358599 28.993 2 -1.13942558641983 0.35661419917370035 1.0 ['ENST00000228811.8_2_12:10998545-10999891:-|nuORF'] 119847 12667 VDENFRPRNE True NCI_RA007_Epitope_Rep2 1274.6003624877796 1274.59926993586 53.885 2 -1.1394427457460579 0.35661783342626857 1.0 ['ENSG00000126838|ENST00000261336|PZP', 'nc|ENSG00000126838|P20742-2|PZP'] 104155 14047 SQFCLLCLSL True PC9_epitope_Rep5 1125.5562383884499 1125.55514993586 59.045 2 -1.1394446430473912 0.35661783342626857 1.0 ['ENST00000513116.1_1_1:26211808-26212198:-|nuORF'] 28239 19372 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.509 2 -1.139521443324074 0.3566341401596756 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 98402 6029 SFDWSMDAVP True NCI_RA007_Epitope_Rep3 1153.47501086229 1153.47337490379 30.695 3 -1.1395603043643197 0.3566341401596756 1.0 ['ENST00000551915.5_1_12:83081308-83379891:+|nuORF', 'ENSG00000179104|ENST00000321196|TMTC2'] 99552 10018 SIEDLLEASMP True H1975_Epitope_Rep1 1203.56930516995 1203.56820993586 43.471 2 -1.1396190259533483 0.35666675114681806 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 60818 10880 LHTEECNVL True PC9_epitope_Rep4 1056.4909952796 1056.4898899358602 49.615 2 -1.1396632959968231 0.35666675114681806 1.0 ['ENSG00000103121|ENST00000219400|CMC2'] 134153 19435 VYLLINSQV True PC9_epitope_Rep5 1047.5964463243101 1047.5953499358602 79.807 2 -1.1396679404893395 0.35666675114681806 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 89998 4780 RDLWRHFRKV True PC9_epitope_Rep6 1411.79492040375 1411.79326490379 25.848 3 -1.139679822083266 0.35666675114681806 1.0 ['ENST00000563230.1_1_16:79123974-79135149:+|nuORF'] 68862 8268 LTMSSLFNK True NCI_RA007_Epitope_Rep2 1039.5372171960298 1039.5361099358602 36.799 2 -1.1399170798291578 0.3567509345498321 1.0 ['ENSG00000282872|ENST00000634842|C1orf232'] 83863 8655 PVPAAAPDA True PC9_epitope_Rep5 807.41266830591 807.41156993586 38.235 2 -1.140013741093163 0.3567844290131279 1.0 ['nc|ENSG00000148835|Q15542-2|TAF5', 'ENSG00000148835|ENST00000369839|TAF5'] 63096 20561 LLQQRLLL True PC9_epitope_Rep4 995.64915060351 995.64804993586 87.238 2 -1.1401069267011121 0.35682607263235255 1.0 ['ENST00000359486.7_2_22:42575622-42575670:-|nuORF', 'ENST00000204005.13_1_19:41129584-41129844:+|nuORF'] 18193 15783 EILPFEKM True H1975_Epitope_Rep2 1005.52050450273 1005.51940993586 65.89 2 -1.1401183034477596 0.35682607263235255 1.0 ['ENSG00000137776|ENST00000380516|SLTM', 'nc|ENSG00000137776|Q9NWH9-3|SLTM'] 57493 9908 LEDKARELV True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 45.761 2 -1.1402173536931692 0.3568550430816016 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 112580 10276 TLEMILKLM True PC9_epitope_Rep6 1090.6130249885798 1090.6119299358602 50.213 2 -1.1402261158049591 0.3568550430816016 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S'] 67804 19309 LTADCCGRRPV True PC9_epitope_Rep4 1189.5695970368101 1189.56848993586 82.379 2 -1.1402291136615894 0.35685867058614834 1.0 ['ENSG00000259803|ENST00000682282|SLC22A31', 'nc|ENSG00000259803|A6NKX4|SLC22A31'] 63813 19837 LNIEFKDLR True PC9_epitope_Rep4 1146.6397081186199 1146.6386099358601 84.434 2 -1.1402371532918443 0.35685867058614834 1.0 ['nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C'] 21046 6005 EQTLEACLDVH True NCI_RA007_Epitope_Rep5 1256.5707021522799 1256.5696099358602 29.782 2 -1.1403280284785247 0.3568794901359553 1.0 ['ENSG00000135828|ENST00000367559|RNASEL', 'nc|ENSG00000135828|Q05823-2|RNASEL'] 69137 14681 LTRPPELQIP True PC9_epitope_Rep3 1162.6710082468999 1162.66936490379 61.609 3 -1.1405959424971508 0.3569383204095079 1.0 ['OR8K5|p.R20P|1|0.21|ENSG00000181752|chr11:56160259-56160259|C/G|missense_variant'] 105649 13185 SSEEDYGEFEF True H1975_Epitope_Rep3 1337.4935569470497 1337.4924499358601 55.967 2 -1.1406057571209585 0.35694646816598036 1.0 ['CON__Q28107'] 112194 5204 TKGHDRMYWYR True NCI_RA007_Epitope_Rep2 1511.7092017441098 1511.7075449037902 24.861 3 -1.1406913844162634 0.35695461571598713 1.0 ['nc|ENSG00000211750|A0A075B6N3|TRBV24-1'] 71542 9724 MAKPFFRLQK True NCI_RA007_Epitope_Rep5 1264.71143359024 1264.71032993586 44.032 2 -1.1407224796923092 0.356966387512828 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 107267 23243 SVLCIRCFL True PC9_epitope_Rep2 1052.5510934383599 1052.5499899358601 94.887 2 -1.1407343880488312 0.356966387512828 1.0 ['ENST00000291232.4_2_22:42319190-42319607:-|nuORF'] 121119 8923 VERMYRRISNM True NCI_RA007_Epitope_Rep1 1453.7282229365298 1453.7271299358601 38.709 2 -1.1407379736447176 0.356966387512828 1.0 ['PDE1C|p.T147I|1|0.43|ENSG00000154678|chr7:31878022-31878022|G/A|missense_variant'] 58377 14663 LENLRFHV True PC9_epitope_Rep2 1026.5610638750998 1026.5599699358602 61.668 2 -1.1407766085531788 0.3569745343975675 1.0 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'PGK2|p.A273Hfs*6|1|0.19|ENSG00000170950|chr6:49786375-49786375|G/-|frameshift_variant'] 58437 9566 LEPFRVEQAP True PC9_epitope_Rep6 1184.61897267404 1184.6178699358602 47.092 2 -1.1408489192552427 0.35699897381323403 1.0 ['ENST00000590666.5_1_19:36502237-36505114:-|nuORF', 'ENST00000468004.5_1_19:36501827-36504438:-|nuORF', 'nc|ENSG00000239382|Q3KRA9-3|ALKBH6', 'ENST00000392183.7_1_19:36501753-36505114:-|nuORF', 'ENSG00000239382|ENST00000378875|ALKBH6', 'nc|ENSG00000239382|Q3KRA9-2|ALKBH6'] 43525 12339 IGPETTKV True PC9_epitope_Rep1 843.4701831820299 843.46908993586 52.319 2 -1.1408666161777146 0.35699897381323403 1.0 ['ENSG00000261272|ENST00000561890|MUC22'] 127361 22850 VMVALSSLLV True PC9_epitope_Rep2 1030.6096538602999 1030.60854993586 93.382 2 -1.1409132951470418 0.35699897381323403 1.0 ['nc|ENSG00000132670|P18433-6|PTPRA', 'ENSG00000132670|ENST00000399903|PTPRA'] 124565 15341 VGVRRRGNVRT True NCI_RA007_Epitope_Rep3 1268.7537838677597 1268.7526899358602 67.895 2 -1.1409218794924432 0.35700259707354154 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 74029 8454 NDISHRLR True H1975_Epitope_Rep1 1009.5417254128499 1009.54062993586 37.447 2 -1.1409778168477642 0.35700259707354154 1.0 ['ENSG00000187135|ENST00000335523|VSTM2B'] 66744 25031 LSLKPGQG True PC9_epitope_Rep5 798.4599528514998 798.45884993586 101.42 2 -1.1410708112556784 0.3570487483530962 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 2124 6974 AELMQALWR True NCI_RA007_Epitope_Rep1 1116.5749996870798 1116.57390993586 31.13 2 -1.141081531069903 0.35706956180245003 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.R869L|1|0.26|ENSG00000196367|chr7:98917663-98917663|G/T|missense_variant'] 124019 10463 VGSGIQPL True PC9_epitope_Rep1 769.43340375049 769.43230993586 45.134 2 -1.1411764201769077 0.3571274749496459 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-3|NPC1L1'] 125798 24203 VKVLPIPVL True NCI_RA007_Epitope_Rep3 976.6684890657599 976.66738993586 104.77 2 -1.1411769638373608 0.3571274749496459 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'nc|ENSG00000127838|Q8N490-4|PNKD', 'nc|ENSG00000127838|Q8N490-3|PNKD'] 49606 22205 KGAKGATG True PC9_epitope_Rep2 688.3867879112399 688.38623496793 90.894 1 -1.141223507266837 0.3571274749496459 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2'] 59696 10409 LGARFRRVP True NCI_RA007_Epitope_Rep4 1070.6461309117399 1070.64502993586 46.891 2 -1.1412616010069712 0.3571274749496459 1.0 ['ENST00000389262.8_1_22:19048277-19109719:-|nuORF'] 106003 10219 SSVFFIEFL True NCI_RA007_Epitope_Rep4 1087.5589981864298 1087.5579099358602 46.163 2 -1.1412835970948918 0.3571356185553951 1.0 ['ENST00000474002.1_1_1:79095456-79101246:+|nuORF'] 21004 11441 EQRQRLASRYF True NCI_RA007_Epitope_Rep1 1452.75859446468 1452.7574899358601 48.467 2 -1.1413386854347436 0.3571392379408188 1.0 ['ATG2B|p.S593L|1|0.24|ENSG00000066739|chr14:96329587-96329587|G/A|missense_variant'] 130282 18856 VSGRWARV True PC9_epitope_Rep4 929.5195334162898 929.51842993586 80.616 2 -1.1413722523011762 0.3571392379408188 1.0 ['ENST00000546983.1_1_14:36989418-36989796:-|nuORF'] 86911 15510 QLSLHEDLSP True PC9_epitope_Rep4 1137.5666027480102 1137.56550993586 67.584 2 -1.141448479369277 0.35715914272685817 1.0 ['UNC13C|p.M1811Nfs*3|1|0.56|ENSG00000137766|chr15:54511798-54511799|-/A|frameshift_variant', 'UNC13C|p.Q1943Pfs*8|1|0.09|ENSG00000137766|chr15:54549637-54549638|-/C|frameshift_variant', 'UNC13C|p.K2204Nfs*2|1|0.09|ENSG00000137766|chr15:54627080-54627081|AT/-|frameshift_variant', 'ENSG00000137766|ENST00000260323|UNC13C'] 4805 11996 ALEDLKFLPE True H1975_Epitope_Rep1 1173.6281403754099 1173.6270499358602 51.15 2 -1.1414589935072226 0.35715914272685817 1.0 ['ENST00000216019.11_1_22:38885294-38885507:-|nuORF'] 65949 6769 LSDTIEVYQER True H1975_Epitope_Rep2 1351.6619596848298 1351.6603049037901 30.952 3 -1.1414598175504669 0.35715914272685817 1.0 ['ENSG00000175267|ENST00000389398|VWA3A'] 110732 11666 TGGAPRILAL True PC9_epitope_Rep6 967.5814649665099 967.58036993586 56.0 2 -1.1414731107722145 0.35715914272685817 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 116617 5603 TVAESLNR True NCI_RA007_Epitope_Rep5 888.46649478392 888.46538993586 28.24 2 -1.141559047074391 0.3571926180192276 1.0 ['RCBTB2|p.K385N|1|0.19|ENSG00000136161|chr13:48501831-48501831|C/A|missense_variant'] 20083 7240 EMGFDRYKM True H1975_Epitope_Rep1 1175.5103508251898 1175.50924993586 32.86 2 -1.1416018018070475 0.3571962356398272 1.0 ['ENST00000426563.5_1_3:196018200-196044977:-|nuORF', 'ENSG00000213123|ENST00000325318|DYNLT2B'] 46947 12427 ITPELKHYF True PC9_epitope_Rep2 1146.60734536118 1146.60568490379 53.108 3 -1.141609526456341 0.3571962356398272 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 63524 17074 LLYNCWQRR True PC9_epitope_Rep6 1250.6342458986999 1250.63314993586 78.244 2 -1.1416940906399111 0.3572206601312156 1.0 ['ENSG00000114631|ENST00000342480|PODXL2', 'nc|ENSG00000114631|Q9NZ53-2|PODXL2'] 5180 19096 ALMAAEDKV True PC9_epitope_Rep1 946.4793679667399 946.47826993586 78.242 2 -1.1416986054278766 0.3572206601312156 1.0 ['ENST00000560975.5_1_15:63335715-63353895:+|nuORF'] 76123 1414 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 7.8232 3 -1.1417400356163756 0.3572206601312156 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 105201 11343 SRGRGALI True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 50.282 2 -1.141868022785261 0.3572324176450473 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4'] 38389 5081 HELMIHCW True H1975_Epitope_Rep1 1067.46809209039 1067.46698993586 24.616 2 -1.1418786566060564 0.3572324176450473 1.0 ['ECHDC1-FYN|5|fusion', 'ECHDC1-FYN|8|fusion', 'ECHDC1-FYN|6|fusion', 'ECHDC1-FYN|2|fusion', 'ECHDC1-FYN|9|fusion', 'ECHDC1-FYN|4|fusion', 'ECHDC1-FYN|7|fusion', 'ECHDC1-FYN|3|fusion', 'ECHDC1-FYN|1|fusion', 'ENST00000491885.6_1_6:111982944-111997736:-|nuORF', 'nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN'] 70285 13575 LVRTDAKTI True PC9_epitope_Rep1 1015.6025943339099 1015.60148993586 57.072 2 -1.141928123597352 0.3572324176450473 1.0 ['ENST00000491974.1_1_1:159807783-159824677:-|nuORF'] 131474 22066 VTKARLTDK True PC9_epitope_Rep4 1030.61349337078 1030.6123899358602 93.094 2 -1.141973836519388 0.35724417426545085 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 18181 16210 EILEPPKKRT True H1975_Epitope_Rep1 1209.70812203161 1209.70648490379 67.7 3 -1.1419790384270139 0.35724417426545085 1.0 ['ENSG00000162069|ENST00000572449|BICDL2', 'nc|ENSG00000162069|A1A5D9-2|BICDL2', 'ENST00000572240.5_1_16:3078109-3079857:-|nuORF'] 129295 19225 VQVQRRKKVT True NCI_RA007_Epitope_Rep5 1240.7727879768397 1240.7716899358602 80.814 2 -1.1419794021011516 0.35724417426545085 1.0 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 98822 14938 SGPPIVIRDSP True PC9_epitope_Rep6 1136.61897267404 1136.6178699358602 69.461 2 -1.1420801067608142 0.35725140570386504 1.0 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 15236 3986 EAEIYQTVMLR True NCI_RA007_Epitope_Rep2 1351.6805869544298 1351.6789349037902 20.141 3 -1.1421244989402546 0.35725140570386504 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B'] 57779 10802 LEERELSV True PC9_epitope_Rep3 973.5080252427299 973.50692993586 46.517 2 -1.1421256879948234 0.35725140570386504 1.0 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'nc|ENSG00000198276|Q9NWZ5-3|UCKL1'] 117914 9766 TWRWPWLRWWQ True H1975_Epitope_Rep2 1699.8524352798697 1699.85077490379 42.551 3 -1.1421359703606548 0.35725140570386504 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 65449 24576 LRILLVLKPI True H1975_Epitope_Rep3 1176.83220034592 1176.83056490379 102.27 3 -1.1422220198788169 0.3572595453682011 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 21783 8139 ERWIKFRFQTM True NCI_RA007_Epitope_Rep2 1540.7972884725198 1540.79563490379 36.293 3 -1.1422340624112877 0.3572631605607406 1.0 ['ENSG00000196440|ENST00000423738|ARMCX4'] 62426 5144 LLHGFGGG True NCI_RA007_Epitope_Rep3 756.39187329168 756.39076993586 27.227 2 -1.1422520065070347 0.3572631605607406 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 220 12794 AAFLVTELLPP True H1975_Epitope_Rep3 1169.66961126457 1169.6685099358601 54.429 2 -1.1422810779716963 0.35726677557016046 1.0 ['nc|ENSG00000147535|Q8NEB5-4|PLPP5', 'ENST00000531823.5_1_8:38125951-38126678:-|nuORF', 'ENST00000528814.1_1_8:38126264-38126717:-|nuORF', 'nc|ENSG00000147535|Q8NEB5-2|PLPP5', 'ENSG00000147535|ENST00000424479|PLPP5'] 72607 23731 MLTREIKKGN True H1975_Epitope_Rep1 1188.6648773206398 1188.66376993586 98.521 2 -1.1422925288012677 0.35726677557016046 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'PIEZO2|p.N2125Tfs*10|1|0.09|ENSG00000154864|chr18:10697862-10697862|T/-|frameshift_variant', 'PIEZO2|p.S2477Lfs*18|1|0.26|ENSG00000154864|chr18:10681672-10681672|A/-|frameshift_variant'] 16711 9642 EERWQWHRLQH True NCI_RA007_Epitope_Rep2 1603.77564151115 1603.77454993586 42.12 2 -1.1423475476626437 0.3573129036342915 1.0 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant'] 42050 6728 IDILVFMVSDS True PC9_epitope_Rep4 1237.62642612325 1237.62532993586 33.068 2 -1.1423956753288862 0.3573499803730389 1.0 ['CACNA1G|p.S1364F|1|0.19|ENSG00000006283|chr17:50603121-50603121|C/T|missense_variant'] 71342 12965 LYQVLYFPLFW True H1975_Epitope_Rep1 1487.78530972315 1487.7842099358602 54.945 2 -1.142400755822511 0.3573499803730389 1.0 ['ENST00000377258.5_1_1:9937984-9953219:-|nuORF'] 45101 19972 IPLIERLQRN True NCI_RA007_Epitope_Rep1 1250.7459045226599 1250.74426490379 81.893 3 -1.1424170536025902 0.3573499803730389 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 4507 5971 AKEAIKNSS True NCI_RA007_Epitope_Rep2 946.5083595959001 946.50726993586 27.835 2 -1.142487960778333 0.35737800400111425 1.0 ['ENSG00000077264|ENST00000372007|PAK3', 'nc|ENSG00000077264|O75914|PAK3', 'nc|ENSG00000077264|O75914-4|PAK3', 'nc|ENSG00000077264|O75914-3|PAK3'] 909 13021 ADLRRHSLKN True NCI_RA007_Epitope_Rep5 1208.6738022115599 1208.6727099358602 56.762 2 -1.1425167604207804 0.35737800400111425 1.0 ['TAF1L|p.L1017H|1|0.04|ENSG00000122728|chr9:32632530-32632530|A/T|missense_variant'] 121662 23344 VFKGQKLLKC True PC9_epitope_Rep5 1162.6896355165 1162.68852993586 94.775 2 -1.1425318393134387 0.35737800400111425 1.0 ['CON__ENSEMBL:ENSBTAP00000034412'] 484 7384 AAMMLAVATV True PC9_epitope_Rep3 976.5085599200398 976.50746993586 33.412 2 -1.1425559172789506 0.35737800400111425 1.0 ['ENST00000360830.8_1_10:79797061-79800436:+|nuORF', 'ENST00000372360.7_1_10:79797030-79800436:+|nuORF'] 122450 6987 VGEALAAP True NCI_RA007_Epitope_Rep4 726.3912045853399 726.39065496793 33.501 1 -1.1425573922915941 0.35737800400111425 1.0 ['ENST00000261402.6_1_12:106532525-106533446:-|nuORF'] 91849 16236 RKKKLKKKKTL True PC9_epitope_Rep5 1397.9922232279696 1397.99056490379 67.44 3 -1.1426252495217804 0.35741959989870853 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 12881 11026 DLIGCQRL True PC9_epitope_Rep6 916.4800366730799 916.47892993586 53.315 2 -1.14265105082367 0.35741959989870853 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'ENST00000463634.6_1_6:4056876-4060847:+|nuORF'] 63757 10800 LNEIWHRRHDY True H1975_Epitope_Rep2 1537.75384343741 1537.75274993586 46.572 2 -1.1426917063629234 0.3574232103517257 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 141618 18432 YTRVVRRTL True NCI_RA007_Epitope_Rep3 1162.6934750269797 1162.6923699358601 80.685 2 -1.1427788968966421 0.3574232103517257 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA'] 66707 8393 LSLEPPWACL True NCI_RA007_Epitope_Rep1 1127.5685173243098 1127.56740993586 36.648 2 -1.1427991809151812 0.3574268206218981 1.0 ['ENST00000294785.9_1_1:160328057-160328183:+|nuORF'] 33838 12831 GLNRLPTPSP True NCI_RA007_Epitope_Rep1 1050.5821932425 1050.58108993586 53.9 2 -1.1427992399136446 0.3574268206218981 1.0 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1'] 83691 21376 PVFFSHRF True H1975_Epitope_Rep3 1035.5290354708297 1035.5279299358601 89.32 2 -1.1429376013196164 0.3574937330666194 1.0 ['ENST00000466482.5_1_3:98489996-98501720:+|nuORF', 'ENST00000495376.5_1_3:98489996-98502446:+|nuORF', 'ENST00000476833.5_1_3:98489996-98501153:+|nuORF'] 92254 25888 RLKQKIKVLKK True NCI_RA007_Epitope_Rep5 1380.9656741269598 1380.96403490379 107.13 3 -1.142942415351558 0.3574937330666194 1.0 ['ENST00000481507.5_1_9:37326993-37357262:+|nuORF', 'ENSG00000147905|ENST00000336755|ZCCHC7'] 22697 18365 ETRIIHRGRR True NCI_RA007_Epitope_Rep3 1292.75378386776 1292.75212490379 80.425 3 -1.1429708585526537 0.35752174298337785 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 121274 11913 VETITSEVIE True PC9_epitope_Rep1 1118.57068506894 1118.5695899358602 50.69 2 -1.1429934885799464 0.35752174298337785 1.0 ['ENSG00000008405|ENST00000008527|CRY1'] 108609 7074 SYPHLVSARP True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59198993586 33.833 2 -1.1430121667883297 0.35752174298337785 1.0 ['ENST00000498526.1_1_2:130897068-130897428:-|nuORF'] 45812 10401 ISDEFSEVIK True PC9_epitope_Rep1 1165.58666948625 1165.5855699358601 44.891 2 -1.1430394862869024 0.35752174298337785 1.0 ['ENSG00000110047|ENST00000320631|EHD1', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3'] 18760 17918 ELCLLLHF True PC9_epitope_Rep5 986.5259242363401 986.52482993586 73.939 2 -1.1430586106827672 0.35752174298337785 1.0 ['ENST00000542104.5_2_12:65090281-65090509:+|nuORF'] 30829 9221 GAPELNGG True NCI_RA007_Epitope_Rep5 713.3344179852099 713.33386496793 42.119 1 -1.1431477207552798 0.35755519546283165 1.0 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 55449 7491 LAFNQKSNLFR True H1975_Epitope_Rep1 1336.7251690780797 1336.7240699358601 33.81 2 -1.1431867827809608 0.3575795936451674 1.0 ['nc|ENSG00000164048|Q86UQ0-2|ZNF589', 'ENSG00000164048|ENST00000354698|ZNF589', 'ENST00000457782.5_1_3:48298389-48310273:+|nuORF', 'nc|ENSG00000164048|Q86UQ0-3|ZNF589'] 32454 21875 GGAAKKGG True PC9_epitope_Rep2 644.3605731633999 644.36002496793 89.617 1 -1.1432040367115002 0.3575795936451674 1.0 ['MYH2|p.G638A|1|0.16|ENSG00000125414|chr17:10536591-10536591|C/G|missense_variant'] 55183 16068 LAASKGHWK True H1975_Epitope_Rep3 996.5504991914 996.54940993586 67.262 2 -1.143222324128252 0.3575795936451674 1.0 ['GPR75-ASB3|p.Q89K|1|0.15|ENSG00000115239|chr2:53750873-53750873|G/T|missense_variant'] 123361 6419 VGLYTQCMGP True NCI_RA007_Epitope_Rep4 1067.47798806775 1067.47688993586 31.291 2 -1.143303379202707 0.35760759493670885 1.0 ['ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 13297 4906 DLTKKGKR True NCI_RA007_Epitope_Rep3 944.5767139392399 944.57560993586 26.287 2 -1.1433163277098644 0.35760759493670885 1.0 ['ENST00000563680.1_1_16:30004959-30006553:-|nuORF', 'ENST00000565996.1_1_16:30006421-30006926:-|nuORF', 'nc|ENSG00000149929|Q9BW71-3|HIRIP3', 'ENST00000563053.1_1_16:30005092-30006861:-|nuORF', 'nc|ENSG00000149929|Q9BW71-2|HIRIP3', 'ENSG00000149929|ENST00000279392|HIRIP3'] 130285 4486 VSGTQEQTK True NCI_RA007_Epitope_Rep5 976.48253877088 976.48144993586 23.905 2 -1.1433175233612747 0.35760759493670885 1.0 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 123171 14478 VGKYFWPRI True NCI_RA007_Epitope_Rep5 1164.6443995762397 1164.64330993586 62.371 2 -1.143335666249011 0.35760759493670885 1.0 ['ENST00000511405.1_1_5:111575355-111600594:-|nuORF', 'ENSG00000129595|ENST00000261486|EPB41L4A'] 46635 9346 ITDISKNSV True PC9_epitope_Rep1 975.52367530687 975.52256993586 40.806 2 -1.1433366666021527 0.35760759493670885 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 121655 11350 VFIGHLCL True NCI_RA007_Epitope_Rep4 900.4891448047999 900.48804993586 50.564 2 -1.1433408381745702 0.3576157263832103 1.0 ['ENSG00000126895|ENST00000646375|AVPR2', 'nc|ENSG00000126895|P30518-2|AVPR2'] 71278 20860 LYPSQSPEAF True PC9_epitope_Rep5 1137.53423999057 1137.5331499358601 85.29 2 -1.143401890683444 0.3576238576238576 1.0 ['BCKDHB|p.H196P|1|0.25|ENSG00000083123|chr6:80168984-80168984|A/C|missense_variant'] 378 24279 AALALTVDLPP True H1975_Epitope_Rep3 1079.6226610721499 1079.6215699358602 101.13 2 -1.1434269444873044 0.35762746190066325 1.0 ['ENSG00000125657|ENST00000245817|TNFSF9'] 91847 16000 RKKKLKKKKTL True PC9_epitope_Rep5 1397.9922232279696 1397.99056490379 66.534 3 -1.1434441929429402 0.35762746190066325 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 133171 26545 VVRLLGLCL True PC9_epitope_Rep1 984.6154079470799 984.61430993586 107.79 2 -1.143487300999088 0.357633747199757 1.0 ['PTK7|p.R866L|1|0.16|ENSG00000112655|chr6:43145389-43145389|G/T|missense_variant'] 7845 6750 ASWKWYYPFHY True H1975_Epitope_Rep1 1546.70337100434 1546.7022699358602 31.004 2 -1.143535974590065 0.357633747199757 1.0 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 113032 9392 TLNEKLTA True NCI_RA007_Epitope_Rep4 888.4916469026 888.49054993586 42.98 2 -1.14356070303921 0.357633747199757 1.0 ['ENSG00000254999|ENST00000530758|BRK1', 'nc|ENSG00000254999|Q8WUW1-2|BRK1'] 101096 13921 SLGISYDDPKK True PC9_epitope_Rep2 1221.62411762413 1221.6230299358601 58.827 2 -1.1435785167406625 0.357633747199757 1.0 ['ENSG00000197140|ENST00000379907|ADAM32', 'ADAM32|p.K377Tfs*51|1|0.12|ENSG00000197140|chr8:39211218-39211219|-/TA|frameshift_variant'] 133172 26706 VVRLLGLCL True PC9_epitope_Rep1 984.6154079470799 984.61430993586 108.56 2 -1.143618131242472 0.357633747199757 1.0 ['PTK7|p.R866L|1|0.16|ENSG00000112655|chr6:43145389-43145389|G/T|missense_variant'] 109118 3737 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 19.37 2 -1.1436295368647151 0.357633747199757 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 57728 10882 LEELNLPD True H1975_Epitope_Rep3 941.4705771048499 941.47002496793 46.94 1 -1.1436382927580413 0.357633747199757 1.0 ['ENSG00000184220|ENST00000421999|CMSS1', 'nc|ENSG00000184220|Q9BQ75-2|CMSS1'] 79024 14061 PALEPVSRP True PC9_epitope_Rep5 964.5341804209199 964.53308993586 59.099 2 -1.1436399724079316 0.35763735081568854 1.0 ['TMEM74B|p.R145Vfs*10|1|0.63|ENSG00000125895|chr20:1181186-1181186|G/-|frameshift_variant', 'ENSG00000125895|ENST00000429036|TMEM74B'] 35297 25758 GRKAGPPP True PC9_epitope_Rep1 778.4449714936999 778.44386993586 104.14 2 -1.1436477025090384 0.35763735081568854 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 120824 4684 VELLQMEQVR True PC9_epitope_Rep1 1243.65945758703 1243.65781490379 22.889 3 -1.1436650352960027 0.35765268672960593 1.0 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7'] 79983 9742 PEVTIGAHQT True PC9_epitope_Rep1 1051.52982331647 1051.5287299358602 42.332 2 -1.1436654370077912 0.35765268672960593 1.0 ['ENSG00000130414|ENST00000252711|NDUFA10', 'nc|ENSG00000130414|O95299-2|NDUFA10'] 45198 13165 IPRLSGKSSL True NCI_RA007_Epitope_Rep4 1056.62914343492 1056.6280499358602 57.74 2 -1.1436874205741794 0.35765268672960593 1.0 ['ENST00000577662.1_1_17:63534239-63554825:-|nuORF'] 22534 4232 ETHIRVPA True PC9_epitope_Rep1 921.50321464581 921.50210993586 21.171 2 -1.143696209745198 0.35765268672960593 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 107220 896 SVISNIRNQME True H1975_Epitope_Rep3 1289.63978477161 1289.63812490379 4.8626 3 -1.1436998304017703 0.35765268672960593 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'METTL25|p.I562Ffs*9|1|0.2|ENSG00000127720|chr12:82477316-82477316|G/-|frameshift_variant', 'ENSG00000127720|ENST00000248306|METTL25'] 123485 9352 VGPEPGPPG True PC9_epitope_Rep4 805.3970182417698 805.39592993586 43.579 2 -1.1438127848484834 0.3576987813057619 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000487793.5_1_22:19968732-19974706:-|nuORF', 'ENST00000473551.5_1_22:19968732-19978281:-|nuORF'] 66923 5965 LSNRMNYFQVA True NCI_RA007_Epitope_Rep1 1341.64995553249 1341.64831490379 27.25 3 -1.1438719001553819 0.35774487471526195 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 80344 17493 PGGHGRCS True NCI_RA007_Epitope_Rep5 769.32895576529 769.32784993586 74.078 2 -1.1439083902572063 0.35776565723035647 1.0 ['ENST00000358187.2_1_10:106075300-106075366:-|nuORF'] 110898 5427 TGVFLQYTH True H1975_Epitope_Rep2 1064.52909504048 1064.5279899358602 25.901 2 -1.1439995186774963 0.357824403330718 1.0 ['ENSG00000146282|ENST00000369536|RARS2', 'ENST00000497828.1_1_6:88228346-88228628:-|nuORF'] 112477 18932 TLDKMIRNPA True PC9_epitope_Rep5 1157.6226781554901 1157.6215899358601 77.845 2 -1.1440271787936873 0.3578280016197611 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1', 'EPHB1|p.N876H|1|0.18|ENSG00000154928|chr3:135248445-135248445|A/C|missense_variant'] 65448 24871 LRILLVLKPI True H1975_Epitope_Rep2 1176.83220034592 1176.83056490379 102.23 3 -1.1440309465241136 0.3578280016197611 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 106066 7178 STAIGARPP True PC9_epitope_Rep1 868.4766655448 868.47556993586 32.421 2 -1.1440538189299079 0.3578361278076558 1.0 ['ENST00000417355.1_1_2:220163779-220168768:+|nuORF'] 23418 17420 EVSSRLLL True PC9_epitope_Rep6 915.5389314481899 915.53782993586 79.621 2 -1.1441273477947473 0.3578650334695737 1.0 ['ENSG00000124134|ENST00000537075|KCNS1'] 25896 6093 FFLLIIRKLL True PC9_epitope_Rep3 1274.8478504100597 1274.84674993586 28.485 2 -1.1441417689622846 0.3578650334695737 1.0 ['nc|ENSG00000068878|Q14997-3|PSME4'] 116179 4937 TSVITQAPP True PC9_epitope_Rep1 912.4916469025999 912.49054993586 23.852 2 -1.1441600543792758 0.35787315888039684 1.0 ['nc|ENSG00000170653|P17544-2|ATF7', 'nc|ENSG00000170653|P17544-3|ATF7', 'ENSG00000170653|ENST00000420353|ATF7', 'nc|ENSG00000170653|P17544-1|ATF7'] 16439 6737 EELATEWS True H1975_Epitope_Rep3 963.41854153199 963.4179949679301 30.868 1 -1.1441884147729406 0.35788128408558884 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1', 'ENST00000554652.5_1_14:36147090-36221314:-|nuORF', 'ENST00000554704.5_1_14:36176787-36221314:-|nuORF', 'ENST00000443361.1_1_9:108283251-108284913:+|nuORF'] 81652 25678 PLLLLPLL True NCI_RA007_Epitope_Rep1 890.6204762441799 890.61936993586 106.28 2 -1.1442380320080412 0.3579020625079084 1.0 ['ENSG00000008516|ENST00000336577|MMP25', 'ENSG00000182580|ENST00000330394|EPHB3'] 13863 4033 DQRLLLPHWAK True NCI_RA007_Epitope_Rep2 1375.77245362367 1375.7707949037901 20.325 3 -1.14436557690851 0.35796080019232956 1.0 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000473223.5_1_1:155184463-155187072:-|nuORF', 'ENST00000459805.5_1_1:155184905-155186549:-|nuORF'] 112036 22319 TISLRSRK True PC9_epitope_Rep3 959.58761297611 959.58650993586 91.136 2 -1.1443823110683322 0.3579643946199689 1.0 ['ENST00000456324.5_1_19:36727051-36727096:+|nuORF'] 27947 14337 FQEHQFEAL True PC9_epitope_Rep6 1147.52982331647 1147.5287299358602 67.045 2 -1.144390729365994 0.3579643946199689 1.0 ['nc|ENSG00000122986|Q96D96-2|HVCN1', 'nc|ENSG00000122986|Q96D96-4|HVCN1', 'nc|ENSG00000122986|Q96D96-3|HVCN1', 'ENSG00000122986|ENST00000242607|HVCN1'] 89680 21029 QYWTKWLLRLE True H1975_Epitope_Rep3 1534.8296341466196 1534.8285299358602 87.832 2 -1.1444050650532314 0.35797611215142466 1.0 ['ENSG00000125871|ENST00000377710|MGME1'] 47115 8131 ITVEEIIYP True PC9_epitope_Rep2 1075.58012755383 1075.57902993586 36.633 2 -1.1444117611735185 0.35797611215142466 1.0 ['nc|ENSG00000180773|Q6YBV0-2|SLC36A4', 'ENSG00000180773|ENST00000326402|SLC36A4', 'ENST00000527503.1_1_11:92881705-92887463:-|nuORF'] 6073 19449 APLLRRTNQL True H1975_Epitope_Rep2 1180.70403971068 1180.70239490379 80.716 3 -1.1444275405020654 0.35797611215142466 1.0 ['ENST00000417647.6_1_5:140032665-140033557:+|nuORF'] 141229 6959 YTCVVEHTGA True H1975_Epitope_Rep3 1078.4753452154598 1078.4742499358601 31.729 2 -1.1445089137058044 0.3579914221733025 1.0 ['ENST00000498020.1_1_6:32904922-32905177:-|nuORF', 'ENSG00000242574|ENST00000418107|HLA-DMB'] 60956 16154 LIDLMYISTT True PC9_epitope_Rep1 1168.6049624026798 1168.60330490379 66.951 3 -1.1445133692202731 0.3579914221733025 1.0 ['OR2L13|p.M68I|1|0.23|ENSG00000196071|chr1:248099579-248099579|G/T|missense_variant'] 137617 13250 YEFPSSGP True H1975_Epitope_Rep1 882.3759484440199 882.3753949679301 56.062 1 -1.1445215232806416 0.3579914221733025 1.0 ['ENST00000420737.1_1:146016970-146019748:+|nuORF'] 53471 7260 KRGTFAYVDV True NCI_RA007_Epitope_Rep5 1154.60840799034 1154.60730993586 34.602 2 -1.1445227390605546 0.3579914221733025 1.0 ['ENST00000327705.13_1_5:180486965-180487019:+|nuORF', 'BTNL9|p.C503Sfs*88|1|0.12|ENSG00000165810|chr5:181059758-181059759|-/TC|frameshift_variant'] 6557 21641 APVAAAALA True PC9_epitope_Rep1 753.43848913093 753.43738993586 88.069 2 -1.1445553375577033 0.3579914221733025 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 115727 9493 TSALSKKP True PC9_epitope_Rep4 830.48616759934 830.48506993586 44.127 2 -1.1446317860246689 0.3579950153713801 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENSG00000135314|ENST00000257765|KHDC1'] 23436 11036 EVTELLVKHGA True H1975_Epitope_Rep3 1194.66083748602 1194.6597499358602 47.539 2 -1.1446378637001384 0.3579950153713801 1.0 ['ENSG00000107854|ENST00000371627|TNKS2'] 35296 25131 GRKAGPPP True NCI_RA007_Epitope_Rep5 778.4449714936999 778.44386993586 104.17 2 -1.1446850062281297 0.35800313749304186 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 76120 1170 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 6.4809 3 -1.1446910194369622 0.35801938111985426 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 113448 8541 TLSQQRIL True H1975_Epitope_Rep3 957.5607295219299 957.55962993586 37.841 2 -1.1446942684964743 0.35801938111985426 1.0 ['TMPRSS11D|p.E184Q|1|0.05|ENSG00000153802|chr4:67833346-67833346|C/G|missense_variant'] 58060 7712 LEILMSELDP True H1975_Epitope_Rep1 1158.5842269581 1158.5831299358601 34.626 2 -1.1447110701972607 0.35802750262502053 1.0 ['ENSG00000123505|ENST00000368885|AMD1', 'nc|ENSG00000123505|P17707-2|AMD1'] 80019 9863 PFFFFEDYFY True PC9_epitope_Rep3 1420.6015912743997 1420.6004899358602 42.898 2 -1.1447541475841667 0.35804374501891234 1.0 ['ENST00000545576.1_1_12:8756882-8757648:-|nuORF'] 86839 8732 QLQGELQAP True PC9_epitope_Rep5 982.5083595958998 982.50726993586 38.529 2 -1.1447590686548563 0.35804374501891234 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 116895 6837 TVFFILRKK True H1975_Epitope_Rep1 1150.7226498969399 1150.72099490379 31.342 3 -1.144884800761111 0.35807716635041115 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 22600 4686 ETLLQNHQ True H1975_Epitope_Rep2 981.48795850449 981.48686993586 23.12 2 -1.1449623027939262 0.35811417656508926 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'LAMA3-ZNF521|1|fusion', 'LAMA3-ZNF521|2|fusion', 'ENSG00000198795|ENST00000361524|ZNF521', 'ZNF521|p.R991Gfs*14|1|0.4|ENSG00000198795|chr18:25224947-25224947|G/-|frameshift_variant', 'ZNF521|p.M897I|1|0.19|ENSG00000198795|chr18:25225227-25225227|C/A|missense_variant'] 124072 15477 VGSLIVKVS True PC9_epitope_Rep1 900.56441792004 900.56332993586 64.353 2 -1.1449966694596607 0.35811417656508926 1.0 ['ENSG00000177839|ENST00000316105|PCDHB9'] 125500 18571 VKAGITIP True PC9_epitope_Rep6 797.50108938749 797.5005449679301 84.073 1 -1.145031385087644 0.35811417656508926 1.0 ['ENSG00000112115|ENST00000648244|IL17A'] 44451 15114 ILKCDAERI True PC9_epitope_Rep6 1059.57466533391 1059.5735699358602 70.195 2 -1.1450473847419398 0.35812229615199737 1.0 ['ENSG00000031698|ENST00000234677|SARS1'] 36247 4120 GVDPRTRQWMG True H1975_Epitope_Rep1 1301.6298887942498 1301.62825490379 20.76 3 -1.145065806803465 0.3581430649547783 1.0 ['ENST00000333039.2_2_22:39217357-39217534:-|nuORF'] 98842 19485 SGSGGGGK True PC9_epitope_Rep3 605.27690310909 605.27635496793 80.178 1 -1.1451069026771548 0.3581511839708561 1.0 ['ENSG00000183779|ENST00000331569|ZNF703'] 93610 23630 RQPLRWGWR True NCI_RA007_Epitope_Rep4 1253.6893927060498 1253.6877449037902 102.49 3 -1.145168770040213 0.35815930278153735 1.0 ['ENST00000279392.7_1_16:30007232-30007604:-|nuORF'] 123160 10993 VGKSLKDL True PC9_epitope_Rep6 858.51746772762 858.51636993586 53.175 2 -1.1452073147798352 0.35816742138682994 1.0 ['ENST00000403332.2_1_6:129478670-129479855:-|nuORF'] 37007 8036 GVNSEPSLLPY True PC9_epitope_Rep3 1174.5870038394198 1174.58536490379 35.887 3 -1.1452579155276557 0.35817553978674155 1.0 ['ENSG00000075539|ENST00000358350|FRYL'] 67392 17872 LSSLSPHPL True PC9_epitope_Rep5 949.52328138405 949.52218993586 73.763 2 -1.1453553357500053 0.35820442443176786 1.0 ['chr15:89999360-90067110|224|12.31|0.51|4.58|+|0|TE_info:L2c,L2c_dup119085,L2,LINE,donor,+,89998993,89999360|None,ZNF710|1'] 95638 13040 RYDEGTLFS True H1975_Epitope_Rep3 1086.4981888350198 1086.49767496793 55.398 1 -1.1454252517260537 0.35820442443176786 1.0 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS'] 12966 12523 DLLKGQSRLI True PC9_epitope_Rep4 1141.68190728377 1141.68025490379 55.989 3 -1.1455000318203574 0.3582757835622676 1.0 ['nc|ENSG00000138182|Q96Q89-4|KIF20B', 'nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B'] 58259 15050 LELPSRGVSL True PC9_epitope_Rep5 1069.61315901761 1069.61206993586 62.896 2 -1.1455079509008164 0.3582793686127694 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|285|2|anti-sense'] 15820 5355 EDEEEMEHQE True PC9_epitope_Rep3 1303.4510405120698 1303.44994993586 25.673 2 -1.145508574150386 0.3582793686127694 1.0 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF', 'USP4|p.K811Sfs*32|1|0.71|ENSG00000114316|chr3:49284095-49284095|T/-|frameshift_variant'] 22075 8659 ESMTLTGLPNH True PC9_epitope_Rep5 1198.5652228490198 1198.5641299358601 38.25 2 -1.145547266713312 0.3582829534819012 1.0 ['ENSG00000163840|ENST00000296161|DTX3L'] 22568 4928 ETKNPSELAE True NCI_RA007_Epitope_Rep4 1116.5298828861198 1116.52878993586 25.418 2 -1.145565382437764 0.3582829534819012 1.0 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4'] 34073 16844 GLWIWRYQ True PC9_epitope_Rep4 1120.58179931968 1120.58070993586 72.769 2 -1.1456026047991463 0.35828653816967676 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 34605 13926 GPVPEPRQITI True PC9_epitope_Rep5 1205.6768219033297 1205.67572993586 58.587 2 -1.1456158714925815 0.35828653816967676 1.0 ['nc|ENSG00000062038|P22223-2|CDH3', 'ENST00000542274.5_1_16:68679206-68732300:+|nuORF', 'ENSG00000062038|ENST00000264012|CDH3'] 98101 5883 SESDRASLPV True H1975_Epitope_Rep3 1059.51965255559 1059.5185499358602 27.638 2 -1.1456902604313548 0.35829012267610977 1.0 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF'] 40944 9523 HSVDATFEN True NCI_RA007_Epitope_Rep5 1018.43558857846 1018.43448993586 43.266 2 -1.145733099384001 0.35829012267610977 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'CACNA1A|p.L1465P|1|0.8|ENSG00000141837|chr19:13257546-13257546|A/G|missense_variant'] 108366 10606 SYLELLHIF True NCI_RA007_Epitope_Rep5 1133.6120963884498 1133.61046490379 47.434 3 -1.1458145799962773 0.35830635370295427 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 56077 7788 LATKMEYFYWR True H1975_Epitope_Rep3 1506.7329568804598 1506.73184993586 34.939 2 -1.1458174432167472 0.35830635370295427 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 141721 5798 YTVTDQSPRL True PC9_epitope_Rep5 1178.59315184902 1178.59150490379 27.296 3 -1.1459792181175994 0.3583261672315241 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 34111 11 GMEDGSDDMD True H1975_Epitope_Rep2 1070.31685553838 1070.3157499358601 0.045678 2 -1.1459980448664782 0.3583261672315241 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant', 'ENST00000463046.5_1_2:61439047-61463244:-|nuORF'] 96774 16500 SAPPVILEQRR True NCI_RA007_Epitope_Rep3 1264.72516907808 1264.7240699358601 72.701 2 -1.1460346808379163 0.3583261672315241 1.0 ['IGSF10|p.A1839S|1|0.71|ENSG00000152580|chr3:151443432-151443432|C/A|missense_variant'] 45937 16858 ISEIKNKQRRH True H1975_Epitope_Rep1 1407.80587901027 1407.80478993586 70.253 2 -1.1460404810482467 0.3583261672315241 1.0 ['ENSG00000117133|ENST00000370654|RPF1'] 119132 13979 VAIEHLDK True PC9_epitope_Rep6 923.5076313199099 923.50652993586 65.629 2 -1.1461182398575622 0.3583469276780859 1.0 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'CCT5|p.I151F|1|0.16|ENSG00000150753|chr5:10256074-10256074|A/T|missense_variant'] 41739 9108 IAMLETWWNK True NCI_RA007_Epitope_Rep2 1290.6430792468998 1290.64198993586 40.034 2 -1.1461588393878448 0.35835504185740663 1.0 ['GRID2|p.H878Ifs*4|1|0.29|ENSG00000152208|chr4:93772105-93772105|C/-|frameshift_variant', 'nc|ENSG00000152208|O43424-2|GRID2', 'ENSG00000152208|ENST00000282020|GRID2'] 129617 23597 VRPAIPGGG True PC9_epitope_Rep6 822.4711862415398 822.47008993586 103.92 2 -1.14621949238007 0.3583758014137761 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 131959 6653 VTSAQSWRP True NCI_RA007_Epitope_Rep2 1030.5195929859399 1030.51848993586 30.489 2 -1.1462264793797274 0.35838391502276173 1.0 ['ENST00000551000.1_1_12:57871422-57871623:-|nuORF'] 118819 20171 VAAKKVGTEI True PC9_epitope_Rep2 1014.6073453611799 1014.60624993586 83.0 2 -1.1463312221430286 0.3584235282217277 1.0 ['nc|ENSG00000133256|P35913-3|PDE6B', 'ENSG00000133256|ENST00000496514|PDE6B'] 99955 12688 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.5514749679298 53.86 1 -1.1463531364869481 0.3584235282217277 1.0 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 102758 4437 SNDYRVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 22.423 2 -1.146376610891618 0.3584235282217277 1.0 ['ENSG00000165023|ENST00000375765|DIRAS2'] 66642 15160 LSKMKYDEI True NCI_RA007_Epitope_Rep5 1125.57399662757 1125.57235490379 64.996 3 -1.146439467344941 0.3584235282217277 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'ENST00000558953.1_1_14:103932392-103935580:+|nuORF'] 28638 8665 FSLHFFGG True H1975_Epitope_Rep3 910.43373810366 910.43264993586 38.328 2 -1.1464475938892749 0.3584235282217277 1.0 ['ENSG00000176567|ENST00000320048|OR4X1'] 131438 6308 VTIKVTIIIY True NCI_RA007_Epitope_Rep4 1161.7372969015698 1161.73564490379 30.868 3 -1.146452652199309 0.3584235282217277 1.0 ['ENSG00000175348|ENST00000534025|TMEM9B', 'nc|ENSG00000175348|Q9NQ34-2|TMEM9B'] 120797 15109 VELGQYGFAL True PC9_epitope_Rep3 1095.5600608155898 1095.5589699358602 63.255 2 -1.1464618508208126 0.3584235282217277 1.0 ['ENSG00000139865|ENST00000553443|TTC6', 'nc|ENSG00000139865|Q86TZ1|TTC6', 'nc|ENSG00000139865|Q86TZ1-2|TTC6'] 116974 14601 TVGLTMRMR True PC9_epitope_Rep2 1063.5630551043898 1063.5619499358602 61.431 2 -1.1464785347488797 0.3584235282217277 1.0 ['ENST00000375571.5_1_20:31436776-31436899:+|nuORF'] 87689 17134 QQVTGELRKLN True PC9_epitope_Rep1 1284.7149983171996 1284.71390993586 70.729 2 -1.1465261872835786 0.358465039828044 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 3572 4780 AGLYELDGQLG True PC9_epitope_Rep4 1134.5557037111398 1134.55405490379 24.958 3 -1.1465279969703641 0.358465039828044 1.0 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1'] 139477 22074 YLRHFNEL True PC9_epitope_Rep5 1090.55597849466 1090.55488993586 89.936 2 -1.1465863230772027 0.3584812623274162 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ATG9A|p.E349K|1|0.09|ENSG00000198925|chr2:219224326-219224326|C/T|missense_variant', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 68034 2767 LTDKHIYQPY True H1975_Epitope_Rep2 1276.64518742188 1276.6435349037902 14.672 3 -1.1466108405808826 0.3584812623274162 1.0 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000540608.5_1_18:21119776-21166285:-|nuORF'] 138675 19342 YIKKYQETLKK True NCI_RA007_Epitope_Rep2 1440.83405082072 1440.83239490379 80.139 3 -1.1466850048731858 0.3584893732694423 1.0 ['ENSG00000166069|ENST00000319669|TMCO5A', 'nc|ENSG00000166069|Q8N6Q1-2|TMCO5A'] 3697 16721 AGRMPGQL True PC9_epitope_Rep5 828.4276071773998 828.4265099358599 69.324 2 -1.1467728877202674 0.3585101271904316 1.0 ['ENSG00000112992|ENST00000344920|NNT'] 113371 8101 TLRVPACYVT True H1975_Epitope_Rep2 1121.5903153980498 1121.58920993586 36.109 2 -1.1468226841020934 0.3585199044284035 1.0 ['ENST00000314355.6_1_9:91926125-91930123:+|nuORF'] 23344 10428 EVRHTPVL True PC9_epitope_Rep3 949.53451477409 949.53340993586 45.05 2 -1.1468519620680317 0.3585199044284035 1.0 ['ENST00000262544.6_1_20:18488293-18488443:+|nuORF'] 81107 11215 PKALPAIN True NCI_RA007_Epitope_Rep2 822.4963383602201 822.49524993586 48.209 2 -1.1468647316942713 0.3585199044284035 1.0 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 17891 10971 EHYRGTFSLW True PC9_epitope_Rep4 1294.6094706195 1294.60836993586 49.972 2 -1.146870508950307 0.3585199044284035 1.0 ['nc|ENSG00000274211|O14512-2|SOCS7', 'nc|ENSG00000274211|O14512|SOCS7', 'ENSG00000274211|ENST00000612932|SOCS7'] 118786 16202 VAADIVTIFNL True PC9_epitope_Rep2 1174.65977485686 1174.6581149037902 67.571 3 -1.1468989713319693 0.3585199044284035 1.0 ['ENSG00000169330|ENST00000305428|MINAR1'] 101212 18980 SLHEPGFF True NCI_RA007_Epitope_Rep5 932.4392174069199 932.43812993586 79.849 2 -1.1469339241295837 0.3585199044284035 1.0 ['ENST00000259605.10_1_9:36338912-36339155:-|nuORF'] 10344 22226 CFSRSRWSL True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 91.849 3 -1.1469431630798983 0.3585199044284035 1.0 ['ENST00000466411.1_1_7:73241946-73243545:+|nuORF'] 16839 13211 EEYVREGSV True PC9_epitope_Rep3 1066.4931034545798 1066.49200993586 55.851 2 -1.1469625660897251 0.3585199044284035 1.0 ['ENST00000263360.10_1_11:85955988-85956345:+|nuORF'] 473 8355 AALVHSDD True PC9_epitope_Rep1 826.38209645362 826.38098993586 36.973 2 -1.1469905836930463 0.3585199044284035 1.0 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL', 'nc|ENSG00000163138|Q8N7B6-4|PACRGL'] 129618 23682 VRPAIPGGG True PC9_epitope_Rep6 822.4711862415398 822.47008993586 104.26 2 -1.1470174358681002 0.35853516711331346 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 121387 5657 VEVPMELCHF True PC9_epitope_Rep5 1202.5464019807398 1202.54476490379 26.758 3 -1.1470302101839904 0.35853516711331346 1.0 ['ENST00000443945.6_1_13:47127426-47279607:+|nuORF', 'nc|ENSG00000136141|Q9Y2L9-2|LRCH1', 'nc|ENSG00000136141|Q9Y2L9|LRCH1', 'ENSG00000136141|ENST00000389797|LRCH1'] 7069 12798 AQRGKARP True PC9_epitope_Rep6 882.5147823890198 882.51368993586 60.727 2 -1.1470477626851923 0.35853516711331346 1.0 ['nc|ENSG00000127483|Q5SSJ5-3|HP1BP3', 'nc|ENSG00000127483|Q5SSJ5-2|HP1BP3', 'ENSG00000127483|ENST00000438032|HP1BP3'] 101677 16837 SLLYMLEKCL True PC9_epitope_Rep5 1211.62940332871 1211.62774490379 69.772 3 -1.1470921289802885 0.35853516711331346 1.0 ['ENSG00000165553|ENST00000298352|NGB'] 102406 8031 SLTLGPRS True PC9_epitope_Rep4 829.4657665079301 829.46466993586 38.342 2 -1.147093345250212 0.35853516711331346 1.0 ['SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 138215 16240 YGSKKDDYV True PC9_epitope_Rep5 1073.50293986229 1073.50184993586 67.456 2 -1.147191347534007 0.3585559165202442 1.0 ['ENST00000496055.5_1_1:76251947-76253334:+|nuORF'] 3585 4973 AGNFMDPSKRH True NCI_RA007_Epitope_Rep1 1258.5876896291 1258.58658993586 23.426 2 -1.1472324934796194 0.35857666540260397 1.0 ['ENSG00000102575|ENST00000648477|ACP5'] 3312 4310 AGGGASGRSHR True NCI_RA007_Epitope_Rep2 1011.4958378495901 1011.49474993586 21.404 2 -1.1472634720561408 0.3585802406714531 1.0 ['ENST00000357360.4_1_X:153707301-153707586:-|nuORF'] 24909 21051 FCAKSLEEKS True NCI_RA007_Epitope_Rep3 1140.54851015572 1140.54685490379 91.59 3 -1.1472705986767846 0.3585802406714531 1.0 ['ENST00000573886.5_1_17:4620541-4621453:+|nuORF', 'nc|ENSG00000141480|P32121-5|ARRB2', 'nc|ENSG00000141480|P32121-2|ARRB2', 'ENSG00000141480|ENST00000269260|ARRB2', 'nc|ENSG00000141480|P32121-3|ARRB2', 'nc|ENSG00000141480|P32121-4|ARRB2'] 16980 11181 EFYEAKLQ True PC9_epitope_Rep1 1026.5022115862998 1026.50110993586 47.891 2 -1.1472929544189872 0.3585883483119083 1.0 ['ENSG00000243710|ENST00000372492|CFAP57'] 112485 17032 TLDLRWAV True PC9_epitope_Rep1 972.53926580136 972.53816993586 70.337 2 -1.1474138551299817 0.3586090957352681 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 80273 9486 PGEAVEGG True NCI_RA007_Epitope_Rep5 714.3184335678999 714.31788496793 43.121 1 -1.1475060017112193 0.3586460558413489 1.0 ['nc|ENSG00000101204|P43681-2|CHRNA4', 'ENSG00000101204|ENST00000370263|CHRNA4', 'CHRNA4|p.S473T|1|0.4|ENSG00000101204|chr20:63349993-63349993|C/G|missense_variant'] 117109 7803 TVKARPSVL True NCI_RA007_Epitope_Rep4 969.5971150306499 969.59600993586 36.699 2 -1.1475603282016833 0.3586460558413489 1.0 ['ENSG00000135372|ENST00000257829|NAT10', 'NAT10|p.D856Tfs*36|1|0.2|ENSG00000135372|chr11:34140542-34140542|G/-|frameshift_variant'] 15600 7718 EARIYAEDP True H1975_Epitope_Rep2 1062.4981888350198 1062.49708993586 34.639 2 -1.1475609426617 0.3586460558413489 1.0 ['ENST00000495767.5_1_3:182740340-182790239:-|nuORF', 'ENSG00000078070|ENST00000265594|MCCC1'] 72018 5403 METDLEVRLR True H1975_Epitope_Rep2 1260.6496211793199 1260.64798490379 25.815 3 -1.1476315951062503 0.3586920801840289 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 87043 9247 QNELGFGRM True H1975_Epitope_Rep1 1050.49166398594 1050.49056993586 40.48 2 -1.1476480819572628 0.358695652173913 1.0 ['ENST00000366955.7_1_1:214776590-214787168:+|nuORF'] 76128 12673 NMRAKGTP True PC9_epitope_Rep3 873.4490708979699 873.44796993586 53.771 2 -1.1476733650504238 0.358695652173913 1.0 ['ENSG00000185518|ENST00000394232|SV2B', 'nc|ENSG00000185518|Q7L1I2-2|SV2B'] 24746 22890 FARAQRRP True PC9_epitope_Rep3 1000.5678805910399 1000.56678993586 93.313 2 -1.1476934243020749 0.358703757535926 1.0 ['TBX3|p.D391Efs*241|1|0.12|ENSG00000135111|chr12:114674762-114674762|G/-|frameshift_variant'] 9060 23919 AVICCWER True PC9_epitope_Rep4 978.4415429893799 978.44044993586 100.45 2 -1.1477554636765608 0.3587190051310568 1.0 ['ENST00000375943.6_1_1:15769060-15773263:+|nuORF'] 94849 19322 RSTNIKKA True NCI_RA007_Epitope_Rep5 916.5454138109599 916.54430993586 81.198 2 -1.1477616747515667 0.3587190051310568 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 39996 16186 HPPPCFAV True PC9_epitope_Rep2 866.4108944841 866.40978993586 67.512 2 -1.147765030144237 0.3587190051310568 1.0 ['ENST00000569193.1_1_16:46957913-46962906:+|nuORF'] 45729 15769 IRVEHDRRRRQ True PC9_epitope_Rep2 1519.85562316735 1519.85452993586 65.921 2 -1.1477943475713932 0.3587190051310568 1.0 ['ENSG00000274180|ENST00000611551|NATD1'] 2030 9436 AEKLKDDSKFS True H1975_Epitope_Rep1 1266.6455813446998 1266.64448993586 41.21 2 -1.1477970017007917 0.3587190051310568 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1', 'ENOX2|p.E416Kfs*17|1|0.56|ENSG00000165675|chrX:130637381-130637381|C/-|frameshift_variant', 'ENSG00000165675|ENST00000394363|ENOX2', 'nc|ENSG00000165675|Q16206|ENOX2'] 29751 13952 FVNMISFMPK True H1975_Epitope_Rep2 1212.6035229340398 1212.60187490379 58.815 3 -1.147820836623253 0.3587397474945341 1.0 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2', 'ENSG00000084453|ENST00000683939|SLCO1A2'] 13671 10451 DPRFYQIPS True PC9_epitope_Rep5 1121.5505587610498 1121.54946993586 45.186 2 -1.1478290296519595 0.3587478515822465 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C'] 103212 12082 SPKDLFEQRKK True NCI_RA007_Epitope_Rep2 1374.76194850962 1374.76084993586 51.59 2 -1.1478772020447192 0.35875595546512656 1.0 ['EPS8L2|p.H482Tfs*21|1|0.19|ENSG00000177106|chr11:723337-723338|-/C|frameshift_variant', 'ENSG00000177106|ENST00000318562|EPS8L2', 'nc|ENSG00000177106|Q9H6S3-3|EPS8L2'] 129616 26562 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 108.2 2 -1.1479065406255908 0.3587640591431821 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 69378 14042 LTVVPRNLP True PC9_epitope_Rep4 1007.61276509479 1007.61166993586 61.923 2 -1.1479895197436736 0.35880004043671654 1.0 ['nc|ENSG00000239732|Q9NR96-4|TLR9', 'nc|ENSG00000239732|Q9NR96-2|TLR9', 'nc|ENSG00000239732|Q9NR96-5|TLR9', 'ENSG00000239732|ENST00000360658|TLR9', 'nc|ENSG00000239732|Q9NR96-3|TLR9'] 118808 7440 VAAGKALE True NCI_RA007_Epitope_Rep3 757.43340375049 757.43230993586 36.388 2 -1.1479958403068897 0.35880004043671654 1.0 ['ENST00000488671.1_1_2:111144305-111181647:-|nuORF', 'ENST00000606848.1_1_2:111144305-111145031:-|nuORF', 'ENST00000454928.5_2_2:110705383-110742349:+|nuORF'] 89933 8269 RCWTWPWREW True NCI_RA007_Epitope_Rep1 1504.6822587202796 1504.6806149037902 36.164 3 -1.1480404985831074 0.35880004043671654 1.0 ['ENST00000374279.3_1_9:114659094-114659565:+|nuORF'] 18752 11610 ELCEILCMP True PC9_epitope_Rep3 1049.4595611222899 1049.4584699358602 49.674 2 -1.148106212306961 0.35880004043671654 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'ENST00000560605.1_1_15:91524929-91537723:-|nuORF', 'ENST00000417173.6_1_15:91524704-91537723:-|nuORF'] 83778 4726 PVKGHAGK True NCI_RA007_Epitope_Rep4 792.4606215578399 792.45952993586 24.609 2 -1.1481284102030125 0.35880004043671654 1.0 ['DMRTB1|p.P297Rfs*13|1|0.17|ENSG00000143006|chr1:53464771-53464771|C/-|frameshift_variant', 'ENSG00000143006|ENST00000371445|DMRTB1'] 124681 14704 VGYLRVQEW True NCI_RA007_Epitope_Rep5 1148.59784330664 1148.59674993586 63.229 2 -1.1481350294274135 0.35880004043671654 1.0 ['CROT|p.G553Efs*3|1|0.29|ENSG00000005469|chr7:87393005-87393005|G/-|frameshift_variant'] 129601 16831 VRNIKHGA True NCI_RA007_Epitope_Rep1 893.5195334162901 893.51842993586 69.598 2 -1.1481624603485163 0.35880360888574386 1.0 ['ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 114154 21384 TPKKASSA True PC9_epitope_Rep3 788.43921740692 788.43812993586 87.552 2 -1.148203823059257 0.35880360888574386 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.P1213Qfs*54|1|0.19|ENSG00000155966|chrX:148987378-148987378|C/-|frameshift_variant'] 123379 3625 VGMIHKAA True NCI_RA007_Epitope_Rep1 825.4530936492499 825.45198993586 18.043 2 -1.1482218051584547 0.35881171104006876 1.0 ['ENST00000521663.1_1_8:58192902-58193274:+|nuORF'] 56680 5809 LDKLEDYQQ True NCI_RA007_Epitope_Rep4 1150.5506183307 1150.5495299358602 28.969 2 -1.1482771926546917 0.3588198129896386 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 62885 23969 LLNILMQLRK True PC9_epitope_Rep1 1240.76894846636 1240.76784993586 97.001 2 -1.148300427070766 0.3588279147344613 1.0 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 98675 17245 SGDVANLRLAA True H1975_Epitope_Rep2 1085.58292151849 1085.58182993586 71.624 2 -1.1483237449233665 0.3588486517904526 1.0 ['ENST00000369651.7_1_6:86159527-86159740:+|nuORF'] 23350 2738 EVRKKCAEEAQ True PC9_epitope_Rep1 1289.63978477161 1289.63812490379 14.955 3 -1.1483646005031232 0.3588567529661499 1.0 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 76104 1612 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 8.8657 3 -1.1483800851117756 0.35886485393712725 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 106626 12909 STRPIRIEP True PC9_epitope_Rep3 1067.60874234351 1067.60764993586 54.675 2 -1.1484116362379109 0.3588719866579067 1.0 ['ENSG00000142798|ENST00000374695|HSPG2', 'ENST00000493940.2_1_1:22177888-22181121:-|nuORF'] 9133 16192 AVKKKPKPTNP True PC9_epitope_Rep2 1206.7448418934998 1206.74374993586 67.532 2 -1.1484473406703368 0.3588719866579067 1.0 ['ENST00000468376.2_1_20:45867286-45947776:-|nuORF', 'nc|ENSG00000101040|Q9ULU4-3|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-6|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-2|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-19|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-16|ZMYND8', 'ENSG00000101040|ENST00000471951|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-11|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-10|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-13|ZMYND8', 'nc|ENSG00000101040|Q9ULU4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-20|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-5|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-9|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-22|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-12|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-14|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-18|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-21|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-8|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-23|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-15|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-17|ZMYND8'] 107072 5215 SVGTEMII True PC9_epitope_Rep5 848.43135514516 848.43024993586 25.077 2 -1.1484541298956412 0.3588719866579067 1.0 ['nc|ENSG00000149922|O95947-2|TBX6', 'ENSG00000149922|ENST00000395224|TBX6'] 76631 23740 NQRALRRF True PC9_epitope_Rep4 1059.60499437575 1059.60388993586 99.692 2 -1.148466902351706 0.3588719866579067 1.0 ['ENSG00000085998|ENST00000371984|POMGNT1', 'nc|ENSG00000085998|Q8WZA1-2|POMGNT1', 'ENST00000489985.1_1_1:46661446-46663526:-|nuORF'] 19060 9609 ELFRNQAA True PC9_epitope_Rep1 947.4824792012298 947.48138993586 41.817 2 -1.1485164182708856 0.3589053557214873 1.0 ['ENST00000360760.9_1_2:201171311-201253960:+|nuORF', 'ENST00000444012.5_2_2:201171311-201236849:+|nuORF'] 43983 17338 IIERVTGLPA True PC9_epitope_Rep3 1067.6338944621898 1067.63278993586 71.864 2 -1.1486020421135779 0.3589387239418825 1.0 ['ENST00000495399.1_1_9:72435845-72472969:+|nuORF', 'ENST00000466872.2_1_9:72435815-72501795:+|nuORF', 'nc|ENSG00000204711|Q5VTT2-2|CFAP95', 'ENST00000529131.5_1_9:72435824-72520897:+|nuORF', 'ENSG00000204711|ENST00000377197|CFAP95'] 83810 9730 PVLIHGEN True PC9_epitope_Rep4 877.4657665079301 877.46466993586 45.065 2 -1.1486545991092285 0.3589549221750556 1.0 ['nc|ENSG00000104381|Q8TB36-2|GDAP1', 'ENSG00000104381|ENST00000220822|GDAP1'] 57707 9875 LEEKRAVPDRM True H1975_Epitope_Rep1 1342.7027193813399 1342.7016299358602 42.917 2 -1.1486569460906837 0.3589549221750556 1.0 ['ENST00000469120.1_1_6:33043797-33048717:+|nuORF', 'ENST00000471184.5_1_6:33048250-33051373:+|nuORF', 'ENSG00000223865|ENST00000418931|HLA-DPB1'] 124316 4590 VGTPSQGPFLR True NCI_RA007_Epitope_Rep3 1157.61930702721 1157.61766490379 24.951 3 -1.1487265190362201 0.35897111958966066 1.0 ['nc|ENSG00000113645|Q8IX03-2|WWC1', 'ENSG00000113645|ENST00000265293|WWC1'] 102216 9006 SLSDYKHV True H1975_Epitope_Rep3 947.47124581119 947.47014993586 39.637 2 -1.1487860447369893 0.35897111958966066 1.0 ['PADI1|p.Q227H|1|0.18|ENSG00000142623|chr1:17228653-17228653|G/T|missense_variant'] 32053 9422 GERPYACPDC True H1975_Epitope_Rep1 1109.4270151240498 1109.42590993586 41.154 2 -1.1488103381982364 0.35899185143073714 1.0 ['nc|ENSG00000214022|Q9BWE0|REPIN1', 'ENSG00000214022|ENST00000489432|REPIN1'] 10921 9189 DADHQGIVPA True PC9_epitope_Rep5 1021.4828731240498 1021.48176993586 40.29 2 -1.148864726316711 0.3589999494668755 1.0 ['SPTA1|p.A1019D|1|0.11|ENSG00000163554|chr1:158653406-158653406|G/T|missense_variant'] 80006 2699 PFDDFDCD True PC9_epitope_Rep5 972.31711323856 972.31656496793 14.885 1 -1.148931257729875 0.35903331354144297 1.0 ['nc|ENSG00000167524|Q96LW2|RSKR', 'ENSG00000167524|ENST00000301037|RSKR'] 17200 6415 EGTLKDIQTK True NCI_RA007_Epitope_Rep5 1131.61355294043 1131.61244993586 31.346 2 -1.1490439201482867 0.35907477355701817 1.0 ['nc|ENSG00000069431|O60706|ABCC9', 'ENSG00000069431|ENST00000261200|ABCC9'] 108132 4914 SYDVSDSGQLE True NCI_RA007_Epitope_Rep2 1198.49897668066 1198.49786993586 23.734 2 -1.149051723705001 0.35907477355701817 1.0 ['nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000067057|ENST00000381125|PFKP'] 16536 5819 EELQGPGL True PC9_epitope_Rep2 841.4181476091699 841.4175949679301 27.777 1 -1.1491142926818998 0.35908643035800003 1.0 ['ENSG00000182853|ENST00000328739|VMO1'] 37632 12511 GVWGDVDP True PC9_epitope_Rep5 843.3762827971899 843.37518993586 53.122 2 -1.149146210817344 0.35908643035800003 1.0 ['ENST00000317907.8_1_2:32853322-32853403:+|nuORF'] 41574 5450 HYYRPLTERMT True PC9_epitope_Rep5 1465.7136184182098 1465.71196490379 25.975 3 -1.1491543992589859 0.35908643035800003 1.0 ['ENSG00000147183|ENST00000276127|CPXCR1'] 80590 5743 PGQAERASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 26.908 2 -1.1492011006681297 0.3591188136321148 1.0 ['ENST00000322048.11_1_16:4852562-4852868:-|nuORF'] 8432 18980 ATNIFAQVPQ True PC9_epitope_Rep2 1087.5662088251897 1087.5651099358602 78.372 2 -1.1492157569067785 0.3591188136321148 1.0 ['ENSG00000168447|ENST00000343070|SCNN1B', 'nc|ENSG00000168447|P51168-2|SCNN1B'] 59426 11683 LFMSFSKQVSS True NCI_RA007_Epitope_Rep5 1259.62200944915 1259.62036490379 51.591 3 -1.1492229597905097 0.3591188136321148 1.0 ['DGKB|p.N89Kfs*7|1|0.26|ENSG00000136267|chr7:14736096-14736097|-/T|frameshift_variant'] 74418 5524 NESRKLWRALQ True NCI_RA007_Epitope_Rep1 1399.76843087239 1399.76677490379 25.557 3 -1.1492276888692108 0.3591188136321148 1.0 ['ENST00000549584.5_1_14:105453158-105465563:+|nuORF', 'ENSG00000140104|ENST00000547315|CLBA1'] 72692 4514 MMHCMWWERWM True NCI_RA007_Epitope_Rep2 1625.6222439399698 1625.62114993586 22.19 2 -1.1492732845492348 0.35912237267582864 1.0 ['ENST00000301180.9_1_12:51133363-51135252:+|nuORF'] 44842 11721 INEPTVAAIV True PC9_epitope_Rep4 1025.5757108797297 1025.57460993586 52.846 2 -1.1492848072520192 0.35912237267582864 1.0 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 102076 4221 SLREMEEGP True H1975_Epitope_Rep2 1046.47025983502 1046.46916993586 21.344 2 -1.1493570179988997 0.35912593153972466 1.0 ['ENSG00000144644|ENST00000282538|GADL1'] 41237 11272 HVLFKGDFRI True PC9_epitope_Rep1 1230.6873270173799 1230.68569490379 48.238 3 -1.149359240930179 0.35912593153972466 1.0 ['ENSG00000135749|ENST00000258229|PCNX2', 'nc|ENSG00000135749|A6NKB5-4|PCNX2', 'nc|ENSG00000135749|A6NKB5-3|PCNX2'] 92881 8424 RPFQRIRWWLY True NCI_RA007_Epitope_Rep1 1619.8837354081497 1619.8820849037902 36.769 3 -1.149468169174968 0.35915928812317643 1.0 ['OR4S2|p.H241Tfs*40|1|0.3|ENSG00000174982|chr11:55651622-55651622|C/-|frameshift_variant'] 32683 6928 GGSFKNPS True NCI_RA007_Epitope_Rep2 792.37661715036 792.37552993586 31.568 2 -1.149473075837138 0.35916284591969483 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 74584 19301 NGEQIIRRR True NCI_RA007_Epitope_Rep2 1140.64758746372 1140.64648993586 79.98 2 -1.1494773748299465 0.35916284591969483 1.0 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 82748 20941 PRKLELRQLST True NCI_RA007_Epitope_Rep4 1339.7935829910698 1339.79194490379 90.75 3 -1.1494939421861885 0.35917093995503574 1.0 ['ENSG00000163394|ENST00000295589|CCKAR'] 120299 7309 VEDRGPQALGV True H1975_Epitope_Rep2 1139.5934862021898 1139.5923899358602 33.053 2 -1.1495812885779322 0.3592169245342596 1.0 ['ENST00000594581.5_1_19:47228900-47229158:-|nuORF'] 148 7501 AADIAVGVLAI True NCI_RA007_Epitope_Rep3 1011.5964463243099 1011.59534993586 36.627 2 -1.1496582798763726 0.35922759247799346 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 81823 14264 PLPTLVSGGTI True PC9_epitope_Rep1 1053.60701100801 1053.6059099358602 59.69 2 -1.1497058393464354 0.35922759247799346 1.0 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 131386 6624 VTHFIEHQK True NCI_RA007_Epitope_Rep2 1137.5930922793698 1137.59198993586 30.377 2 -1.1497248592014793 0.35922759247799346 1.0 ['ENSG00000152467|ENST00000282326|ZSCAN1'] 83699 20439 PVFQSSHY True PC9_epitope_Rep5 963.4450310633499 963.4444849679301 83.657 1 -1.1497304608061656 0.35922759247799346 1.0 ['ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'CELSR1|p.N814Kfs*3|1|0.08|ENSG00000075275|chr22:46534729-46534730|-/C|frameshift_variant'] 55578 8758 LAHEHHCLRI True NCI_RA007_Epitope_Rep2 1227.62949487143 1227.62838993586 38.712 2 -1.1497359039345743 0.35922759247799346 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.V841Cfs*5|1|0.1|ENSG00000155897|chr8:130836431-130836431|C/-|frameshift_variant'] 37217 12758 GVREVFEMATR True PC9_epitope_Rep2 1293.6499555324897 1293.64831490379 54.378 3 -1.1497508420520117 0.35922759247799346 1.0 ['ENST00000473074.1_1_1:113244164-113245337:-|nuORF', 'ENSG00000155366|ENST00000339083|RHOC', 'ENSG00000067560|ENST00000418115|RHOA'] 67339 6355 LSSFQGAK True NCI_RA007_Epitope_Rep5 836.4392174069199 836.43812993586 31.12 2 -1.149870730753762 0.35924831401076 1.0 ['ENSG00000198108|ENST00000305031|CHSY3'] 3754 12570 AGSRVCSK True NCI_RA007_Epitope_Rep2 806.4068717328199 806.40632496793 53.51 1 -1.1499304510989556 0.3592771266922611 1.0 ['FOXK1|p.R191Pfs*113|1|0.14|ENSG00000164916|chr7:4740844-4740845|-/T|frameshift_variant'] 82010 21728 PLVIPRIFV True PC9_epitope_Rep1 1052.67463707536 1052.6735499358601 88.408 2 -1.1499976139891723 0.3592771266922611 1.0 ['ENST00000602978.1_3_9:114235204-114235267:-|nuORF'] 114816 12635 TQLLLWRW True NCI_RA007_Epitope_Rep2 1114.6287495120998 1114.62764993586 53.761 2 -1.150035847665179 0.3593014004824024 1.0 ['ENST00000301335.9_1_17:1478030-1478219:-|nuORF'] 135769 3208 WMKGVGWL True PC9_epitope_Rep1 975.5000438416698 975.49894993586 17.22 2 -1.150061498770234 0.3593014004824024 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 141125 14373 YSRSRQVK True NCI_RA007_Epitope_Rep2 1022.5621265042598 1022.5610299358599 60.574 2 -1.1501014951641029 0.3593014004824024 1.0 ['KIAA1549L|p.L1808Rfs*11|1|0.11|ENSG00000110427|chr11:33668027-33668027|T/-|frameshift_variant', 'ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L'] 20324 4489 ENVHFFHT True PC9_epitope_Rep3 1029.46682913709 1029.46572993586 22.362 2 -1.1501764173366233 0.3593094913370713 1.0 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9'] 123668 23413 VGQRLRSPRRA True PC9_epitope_Rep3 1294.7694339318998 1294.76832993586 95.337 2 -1.1503894247837763 0.35935546603694957 1.0 ['ENST00000492837.1_1_7:102004828-102016337:+|nuORF'] 53487 23589 KRIHGREKRQA True PC9_epitope_Rep5 1377.8065477166099 1377.80544993586 95.716 2 -1.150471170165565 0.3593761838615987 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B'] 72567 9216 MLNQSYER True PC9_epitope_Rep3 1039.4756795686299 1039.4745899358602 40.387 2 -1.150518171468113 0.35942215655819476 1.0 ['ENST00000570330.5_1_17:6544469-6545099:+|nuORF'] 141972 13678 YVIHTLAASL True PC9_epitope_Rep4 1086.60734536118 1086.6062499358602 60.503 2 -1.1505988289556284 0.3594302454793413 1.0 ['DMXL1|p.M2231I|1|0.11|ENSG00000172869|chr5:119175272-119175272|G/A|missense_variant'] 40790 5406 HRWVSLWPWSQ True H1975_Epitope_Rep1 1480.7364024681199 1480.73476490379 25.851 3 -1.1507053622215673 0.3594843043664924 1.0 ['CON__O76014'] 58831 9641 LESRDQAW True PC9_epitope_Rep2 1003.4723084403498 1003.47120993586 42.425 2 -1.1507500589213808 0.3594843043664924 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 98631 11542 SFWQYLVGTP True PC9_epitope_Rep1 1196.5866099165999 1196.58496490379 49.275 3 -1.150775591512557 0.3594914012980126 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2'] 82550 8982 PPSSTSFHLP True NCI_RA007_Epitope_Rep4 1068.52400966004 1068.52290993586 41.384 2 -1.150835527063338 0.3594914012980126 1.0 ['ENST00000514938.1_1_22:50943492-50943879:-|nuORF'] 2032 16289 AEKLLEEEEK True H1975_Epitope_Rep1 1216.61869789052 1216.6176099358602 68.01 2 -1.1508865513492221 0.3594914012980126 1.0 ['ENSG00000105248|ENST00000262962|YJU2'] 23149 12249 EVKQERMERAE True NCI_RA007_Epitope_Rep5 1403.68271221275 1403.68160993586 53.765 2 -1.15090465103074 0.3594914012980126 1.0 ['ENSG00000196284|ENST00000371459|SUPT3H', 'nc|ENSG00000196284|O75486-4|SUPT3H'] 43610 11828 IGTVTPALK True PC9_epitope_Rep3 898.5487678558999 898.54766993586 50.515 2 -1.1509222452111398 0.35949948862990694 1.0 ['ENSG00000100227|ENST00000252115|POLDIP3', 'nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENST00000491021.1_1_22:42993722-42998991:-|nuORF'] 3732 15049 AGSIKEKEL True NCI_RA007_Epitope_Rep3 973.54441075145 973.54330993586 66.661 2 -1.1509612457116258 0.35950757575757575 1.0 ['ANK2|p.V1534E|1|0.29|ENSG00000145362|chr4:113353219-113353219|T/A|missense_variant'] 102762 8054 SNFNYFYHRET True NCI_RA007_Epitope_Rep2 1476.6422272997597 1476.6411299358601 35.959 2 -1.1510296991911049 0.35955354099064407 1.0 ['ENSG00000177272|ENST00000369769|KCNA3', 'KCNA1|p.S447Lfs*3|1|0.29|ENSG00000111262|chr12:4912715-4912715|C/-|frameshift_variant', 'ENSG00000111262|ENST00000382545|KCNA1', 'nc|ENSG00000130037|P22460-2|KCNA5', 'ENSG00000182255|ENST00000328224|KCNA4', 'ENSG00000130037|ENST00000252321|KCNA5', 'ENSG00000143105|ENST00000369771|KCNA10', 'ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000151079|P17658|KCNA6'] 122421 20228 VGDVDFEAVKK True NCI_RA007_Epitope_Rep1 1205.62920300457 1205.62810993586 82.888 2 -1.15109960997471 0.35957425317542485 1.0 ['nc|ENSG00000163738|Q9H903-2|MTHFD2L', 'nc|ENSG00000163738|Q9H903-1|MTHFD2L', 'ENSG00000163738|ENST00000325278|MTHFD2L'] 112729 15402 TLGTLQPPD True PC9_epitope_Rep5 940.48656152216 940.48601496793 64.254 1 -1.1512659103346194 0.3596409272258977 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 15421 7471 EAKRKLQQHNM True H1975_Epitope_Rep3 1381.72485180825 1381.72321490379 33.716 3 -1.151272314870417 0.3596409272258977 1.0 ['MAGI2|p.P1249Qfs*6|1|0.11|ENSG00000187391|chr7:78019937-78019937|G/-|frameshift_variant', 'nc|ENSG00000187391|Q86UL8-2|MAGI2', 'ENSG00000187391|ENST00000354212|MAGI2', 'ENST00000520379.2_1_7:77814916-78119132:-|nuORF'] 64391 14574 LPLQDVYKI True NCI_RA007_Epitope_Rep4 1087.62774645259 1087.62664993586 63.436 2 -1.1513054825256381 0.3596570966845946 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000514975.1_1_4:106406529-106406643:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 142794 19295 YYRRRHRHERT True H1975_Epitope_Rep1 1628.85087214008 1628.8497699358602 80.389 2 -1.1513234270745016 0.3596570966845946 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 13449 6360 DNDGSTALSIA True PC9_epitope_Rep5 1062.4829326937 1062.48182993586 29.44 2 -1.1514617328463224 0.35969043140126505 1.0 ['nc|ENSG00000107104|Q14678-2|KANK1', 'ENSG00000107104|ENST00000382297|KANK1'] 111734 19067 TIHEALKTV True PC9_epitope_Rep1 1010.5760452328999 1010.57494993586 78.131 2 -1.1516143344026037 0.35976164023835977 1.0 ['ENSG00000166557|ENST00000299705|TMED3'] 16859 12396 EFERYLNFYKQ True H1975_Epitope_Rep1 1535.74087871187 1535.73978993586 52.715 2 -1.1516652847879485 0.3597949727934957 1.0 ['ENSG00000146857|ENST00000662584|STRA8'] 84795 12185 QDYIQMIPEL True PC9_epitope_Rep2 1248.6060250318399 1248.6049299358601 52.181 2 -1.1516742873171972 0.35979751054106596 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 131627 5384 VTLSMTDTK True NCI_RA007_Epitope_Rep5 994.50049733414 994.49940993586 27.398 2 -1.151675593871227 0.35979751054106596 1.0 ['nc|ENSG00000147862|O00712-6|NFIB', 'ENSG00000147862|ENST00000380953|NFIB'] 113771 21681 TMLQQGWN True H1975_Epitope_Rep2 976.44365116436 976.44254993586 89.693 2 -1.1516861898726147 0.35979751054106596 1.0 ['ENSG00000159640|ENST00000290866|ACE', 'nc|ENSG00000159640|P12821-2|ACE', 'ENST00000582678.5_1_17:61557143-61562826:+|nuORF'] 56074 11057 LATHRCWEFFL True NCI_RA007_Epitope_Rep5 1421.69142642165 1421.69032993586 49.165 2 -1.1516961473951552 0.35979751054106596 1.0 ['ENST00000416109.2_1_12:7507704-7520763:-|nuORF', 'ENST00000542055.5_1_12:7507707-7510097:-|nuORF'] 76114 319 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 1.7517 3 -1.1517238423631164 0.35979751054106596 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 106705 11299 STTVWEALPD True PC9_epitope_Rep5 1117.5291546101298 1117.52804993586 48.455 2 -1.1517976326595851 0.35980559237518145 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 86725 23045 QLKVIIDSSR True PC9_epitope_Rep5 1157.67682190333 1157.67572993586 93.633 2 -1.1518055289904536 0.35981367400525144 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.E939Sfs*27|1|0.29|ENSG00000077063|chr7:117767144-117767144|C/-|frameshift_variant', 'CTTNBP2|p.P561T|1|0.26|ENSG00000077063|chr7:117791515-117791515|G/T|missense_variant'] 28244 18584 FRKKKREQ True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.6661699358601 78.302 2 -1.1518915903161233 0.3598343789843089 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 133104 6083 VVQKFLAWDK True NCI_RA007_Epitope_Rep4 1232.6917436914798 1232.69008490379 30.014 3 -1.1520225460407993 0.35989548489706275 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 139860 16088 YPPGPAEV True PC9_epitope_Rep6 828.40176926904 828.40066993586 74.214 2 -1.1520299677355161 0.35989548489706275 1.0 ['ENST00000471073.1_1_22:21354171-21355180:-|nuORF', 'ENSG00000184436|ENST00000215742|THAP7'] 29960 8323 FWLRCELGPL True NCI_RA007_Epitope_Rep1 1232.6375999436398 1232.63596490379 36.373 3 -1.1520673054943473 0.35989548489706275 1.0 ['ITGA5|p.R918W|1|0.63|ENSG00000161638|chr12:54399734-54399734|T/A|missense_variant'] 14250 16509 DSMSRSLTIDK True H1975_Epitope_Rep1 1251.6129013174302 1251.61180993586 68.872 2 -1.1521430479912913 0.35989548489706275 1.0 ['ENST00000375882.6_1_6:31634663-31635723:+|nuORF'] 83221 7184 PSVPGPGLGQG True PC9_epitope_Rep5 964.4977949121999 964.49668993586 32.599 2 -1.15215769747473 0.35989548489706275 1.0 ['ENST00000534025.5_1_11:8986022-8986145:-|nuORF'] 141044 7461 YSLKDRAP True H1975_Epitope_Rep3 948.5028802926399 948.50178993586 33.677 2 -1.1521595804475244 0.35989548489706275 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 67497 4538 LSSWACLHLWS True H1975_Epitope_Rep1 1301.62267815549 1301.6210249037902 22.482 3 -1.1521848313566403 0.3598990217734301 1.0 ['ENST00000490681.1_1_3:52566230-52566458:-|nuORF'] 58476 19866 LEQAKRFKANL True NCI_RA007_Epitope_Rep5 1316.7564692063597 1316.75587496793 83.327 1 -1.152203661402929 0.3598990217734301 1.0 ['nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 66883 8321 LSNIWNLSYKQ True NCI_RA007_Epitope_Rep5 1364.7088503076 1364.7072149037901 38.683 3 -1.1523007554673121 0.3599323454421528 1.0 ['ENST00000427230.2_1_7:29252086-29252344:+|nuORF'] 74574 26739 NGDNDCGD True NCI_RA007_Epitope_Rep1 808.2293608633199 808.22881496793 110.81 1 -1.152378378041549 0.35995103050496635 1.0 ['ENSG00000021852|ENST00000371237|C8B', 'ENSG00000113600|ENST00000263408|C9'] 49824 16112 KHRNIVQYL True PC9_epitope_Rep4 1169.66692592597 1169.66527490379 69.912 3 -1.1524408011546032 0.35995103050496635 1.0 ['ENSG00000180815|ENST00000338883|MAP3K15', 'nc|ENSG00000180815|Q6ZN16-2|MAP3K15', 'nc|ENSG00000180815|Q6ZN16-3|MAP3K15', 'ENST00000518578.5_1_X:19378869-19431499:-|nuORF'] 133389 21461 VVVKDQRR True PC9_epitope_Rep6 998.5985120129799 998.59740993586 95.424 2 -1.152447736123057 0.35995103050496635 1.0 ['CON__A2I7N1'] 68268 7530 LTEDITRY True H1975_Epitope_Rep2 1009.5080252427299 1009.50692993586 33.915 2 -1.1524706474876802 0.35995103050496635 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2', 'nc|ENSG00000088367|Q9H4G0-4|EPB41L1', 'EPB41L1|p.E714Afs*9|1|0.13|ENSG00000088367|chr20:36212330-36212340|CGGAGGCCGTA/-|frameshift_variant', 'nc|ENSG00000088367|Q9H4G0-3|EPB41L1', 'nc|ENSG00000088367|Q9H4G0-2|EPB41L1', 'EPB41L1|p.D833Gfs*2|1|0.42|ENSG00000088367|chr20:36221917-36221918|-/G|frameshift_variant', 'ENSG00000088367|ENST00000338074|EPB41L1', 'nc|ENSG00000159023|P11171-4|EPB41', 'nc|ENSG00000159023|P11171-6|EPB41', 'nc|ENSG00000159023|P11171-3|EPB41', 'nc|ENSG00000159023|P11171-5|EPB41', 'nc|ENSG00000159023|P11171-2|EPB41', 'ENSG00000159023|ENST00000343067|EPB41', 'nc|ENSG00000159023|P11171-7|EPB41'] 36722 23438 GVKETLLPPPL True PC9_epitope_Rep5 1162.6961603655798 1162.6950699358601 95.138 2 -1.152531672941053 0.35995103050496635 1.0 ['ENST00000474961.5_1_6:31498060-31498156:-|nuORF'] 8715 5091 AVAQLWGQK True NCI_RA007_Epitope_Rep5 999.55016483823 999.54906993586 26.281 2 -1.1525549544850022 0.35995103050496635 1.0 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 38381 16307 HEKVNIIPL True PC9_epitope_Rep4 1061.62332977849 1061.62222993586 70.686 2 -1.15256571224926 0.35995103050496635 1.0 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF'] 109463 10220 TDLILSTAGVP True NCI_RA007_Epitope_Rep2 1085.59684024713 1085.59574993586 44.344 2 -1.1526240821420501 0.35999697099729916 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 99472 19047 SICLVRNE True PC9_epitope_Rep2 932.4749512926401 932.47384993586 78.629 2 -1.1526890736722515 0.360020191822312 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 42085 15440 IDLDGCIRTL True PC9_epitope_Rep1 1117.58014463717 1117.5790499358602 64.209 2 -1.15271633671796 0.360020191822312 1.0 ['ALDH1A3|p.E135D|1|0.22|ENSG00000184254|chr15:100892569-100892569|G/T|missense_variant'] 44134 17706 IIRKRSIFHQ True PC9_epitope_Rep1 1296.77787335728 1296.77623490379 72.902 3 -1.152718257611197 0.360020191822312 1.0 ['nc|ENSG00000167861|Q8IV36-2|HID1', 'ENSG00000167861|ENST00000425042|HID1', 'ENST00000532395.5_1_17:72947667-72950470:-|nuORF', 'nc|ENSG00000167861|Q8IV36-3|HID1'] 12474 9943 DKAIREQGP True H1975_Epitope_Rep1 1012.53015766964 1012.52906993586 43.182 2 -1.1527532576660278 0.360020191822312 1.0 ['nc|ENSG00000163346|Q96AQ6-3|PBXIP1', 'nc|ENSG00000163346|Q96AQ6-2|PBXIP1', 'ENSG00000163346|ENST00000368463|PBXIP1'] 83023 5625 PSIGAQQPPA True PC9_epitope_Rep6 964.4977949122 964.49668993586 29.719 2 -1.1527987496892524 0.360020191822312 1.0 ['ENSG00000100393|ENST00000263253|EP300'] 95258 12023 RVMLDYYRQSR True NCI_RA007_Epitope_Rep1 1485.75106655609 1485.74941490379 50.754 3 -1.152872212491607 0.360020191822312 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 142478 8163 YYHQKYRG True PC9_epitope_Rep6 1113.5355774032498 1113.5344899358602 40.945 2 -1.1529120495962295 0.360021704017767 1.0 ['FGL2|p.R402G|1|0.23|ENSG00000127951|chr7:77196395-77196395|G/C|missense_variant', 'ENSG00000127951|ENST00000248598|FGL2'] 82173 13400 PNQPIMPMVTQ True PC9_epitope_Rep5 1254.6100648664599 1254.60841490379 56.56 3 -1.1529234350006854 0.360021704017767 1.0 ['ENSG00000204131|ENST00000633930|NHSL2', 'nc|ENSG00000204131|Q5HYW2-2|NHSL2'] 83780 17858 PVKKGVPM True NCI_RA007_Epitope_Rep2 854.5047948689399 854.50368993586 74.203 2 -1.1529511903633833 0.360021704017767 1.0 ['nc|ENSG00000061794|P82673-2|MRPS35', 'MRPS35|p.N275Yfs*6|1|0.04|ENSG00000061794|chr12:27755299-27755300|-/ATATC|frameshift_variant', 'ENSG00000061794|ENST00000081029|MRPS35'] 88081 18809 QRRLPRLEL True NCI_RA007_Epitope_Rep4 1179.7200241279897 1179.71836490379 81.372 3 -1.15297242332693 0.360021704017767 1.0 ['ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 67969 3226 LTDEDREK True NCI_RA007_Epitope_Rep1 1004.4774533904399 1004.47634993586 16.443 2 -1.1529957043330437 0.360021704017767 1.0 ['nc|ENSG00000088970|Q2M2Z5-2|KIZ', 'nc|ENSG00000088970|Q2M2Z5-3|KIZ', 'nc|ENSG00000088970|Q2M2Z5-4|KIZ', 'ENSG00000088970|ENST00000619189|KIZ'] 81725 12343 PLNSWSAC True NCI_RA007_Epitope_Rep5 876.37998827864 876.37888993586 54.126 2 -1.153023271015833 0.360021704017767 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 50068 20348 KKGAGGGG True PC9_epitope_Rep3 630.34492309926 630.3443749679301 83.517 1 -1.1530409542775735 0.360021704017767 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 5092 5596 ALLGAEQSLTP True H1975_Epitope_Rep3 1098.59208921986 1098.59098993586 26.565 2 -1.1530437421155095 0.360021704017767 1.0 ['ENST00000378567.7_1_1:2116514-2116796:+|nuORF'] 89973 11579 RDGDRLWYENP True PC9_epitope_Rep3 1419.6531263366296 1419.6520299358601 49.553 2 -1.153070813893432 0.36002977955557797 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 77956 4502 NVLNEDVQEM-[Oxidation] True NCI_RA007_Epitope_Rep2 1205.52341798713 1205.52287496793 22.142 1 -1.1531072939267475 0.3600504731861199 1.0 ['ENSG00000125903|ENST00000246105|DEFB129'] 88501 17403 QSVKHALR True NCI_RA007_Epitope_Rep2 937.5457481641298 937.54464993586 72.437 2 -1.1531303870830478 0.36005854815712107 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 37299 10203 GVSAALALK True H1975_Epitope_Rep1 828.50690304392 828.50580993586 44.186 2 -1.15324615481185 0.36009185888053297 1.0 ['ENST00000357802.6_1_22:42970741-42976277:-|nuORF', 'ENSG00000189306|ENST00000323013|RRP7A'] 123977 10740 VGSARALR True NCI_RA007_Epitope_Rep4 828.49298431528 828.49188993586 48.157 2 -1.1532871492569203 0.36012516876332756 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 53088 21914 KPPYEELIKKL True PC9_epitope_Rep3 1356.8016880632797 1356.8005899358602 89.593 2 -1.1532967024584797 0.3601276842716193 1.0 ['LARP6|p.D89Y|1|0.4|ENSG00000166173|chr15:70836441-70836441|C/A|missense_variant'] 18622 5603 EKSWLWHCSQR True NCI_RA007_Epitope_Rep1 1458.6826526431 1458.6815499358602 25.858 2 -1.1533688390506516 0.3601276842716193 1.0 ['ENST00000577083.1_1_16:4491378-4492529:+|nuORF'] 120632 7426 VEIENLPQSP True H1975_Epitope_Rep1 1124.57135377528 1124.5702499358601 33.568 2 -1.1533802671387388 0.3601276842716193 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-2|EPB41L5', 'ENST00000495030.1_1_2:120858295-120865750:+|nuORF', 'ENST00000489017.5_1_2:120849230-120859177:+|nuORF', 'ENST00000461128.1_1_2:120849230-120885432:+|nuORF'] 47556 5779 IVTSSLLG True NCI_RA007_Epitope_Rep5 788.4643695256 788.46326993586 28.915 2 -1.1533955125044917 0.3601276842716193 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 92323 5062 RLMKISRHTF True NCI_RA007_Epitope_Rep2 1287.72339525627 1287.72175490379 24.315 3 -1.1534150195606716 0.3601276842716193 1.0 ['ENST00000277225.9_3_9:109685683-109685788:+|nuORF'] 75936 13492 NLSLKNWQRVH True H1975_Epitope_Rep1 1393.75786618869 1393.7567699358601 57.016 2 -1.1536221985948212 0.3602240754993124 1.0 ['ENST00000262198.8_1_18:77895463-77895511:+|nuORF'] 120901 17611 VENLKKQI True PC9_epitope_Rep2 970.5811306133398 970.58002993586 73.018 2 -1.1537573139099129 0.36028261418117585 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 122048 22890 VFWNRKII True PC9_epitope_Rep5 1074.6338348925399 1074.6327299358602 93.045 2 -1.1537851865826199 0.36029421041343374 1.0 ['ENST00000400286.2_1_13:86368440-86368581:-|nuORF'] 25419 5093 FEDFYRFMDNL True PC9_epitope_Rep2 1495.6442014457095 1495.6425449037902 24.967 3 -1.153799186947695 0.36029421041343374 1.0 ['ENSG00000155970|ENST00000318063|MICU3'] 19375 9216 ELLRPELDP True H1975_Epitope_Rep1 1080.58152453616 1080.5804299358601 40.358 2 -1.1538208532691938 0.36029421041343374 1.0 ['nc|ENSG00000136826|O43474-4|KLF4', 'ENST00000497048.5_1_9:110248034-110250560:-|nuORF', 'ENSG00000136826|ENST00000374672|KLF4', 'nc|ENSG00000136826|O43474|KLF4'] 10822 1229 CSSDGCWGPGP True NCI_RA007_Epitope_Rep1 1064.36916589476 1064.3680699358601 6.4883 2 -1.1539226386497925 0.36033558317037784 1.0 ['nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4', 'ENST00000484594.5_1_2:212426591-213403254:-|nuORF'] 81408 9510 PLEGLEQP True PC9_epitope_Rep1 881.4494477374499 881.44834993586 41.435 2 -1.1539493724352645 0.36033558317037784 1.0 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 94147 22815 RRNINYRSF True NCI_RA007_Epitope_Rep5 1224.6475874637201 1224.64594490379 94.97 3 -1.1540355093789691 0.3603436530164257 1.0 ['ENSG00000160445|ENST00000291900|ZER1'] 135285 6255 WFSWRYQLREF True NCI_RA007_Epitope_Rep2 1616.7888319637998 1616.78719490379 28.935 3 -1.1542141413928906 0.3604274162009411 1.0 ['ENSG00000105131|ENST00000221730|EPHX3'] 14613 10325 DVAELPVPP True PC9_epitope_Rep2 935.4963979298699 935.49530993586 45.042 2 -1.1542281965669368 0.360448100116062 1.0 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'ENSG00000132024|ENST00000318003|CC2D1A', 'ENST00000585896.5_1_19:14020678-14030767:+|nuORF'] 126332 24683 VLILILCLKV True NCI_RA007_Epitope_Rep5 1125.75592417117 1125.75537496793 102.43 1 -1.1543574855617664 0.3604894663807241 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 129562 5118 VRLLLLLLLL True NCI_RA007_Epitope_Rep1 1177.85260143733 1177.8515099358601 23.993 2 -1.1543979529664485 0.3604894663807241 1.0 ['ENSG00000142538|ENST00000270631|PTH2'] 76086 24996 NMLIIIAKIY True PC9_epitope_Rep5 1190.70970225474 1190.70860993586 101.31 2 -1.1544082039820076 0.3604975337765387 1.0 ['OR13G1|p.T114Nfs*5|1|0.3|ENSG00000197437|chr1:247672701-247672702|-/T|frameshift_variant', 'ENSG00000197437|ENST00000642119|OR13G1'] 119567 9206 VATEEMEK True H1975_Epitope_Rep2 935.4269980407099 935.42644496793 40.364 1 -1.1544423903820709 0.3605308305580785 1.0 ['ENST00000506725.1_1_5:36608525-36613071:+|nuORF'] 81013 5592 PILLLLLLSL True PC9_epitope_Rep5 1106.76786875386 1106.76676993586 26.512 2 -1.1544602470299559 0.3605343492191639 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 102363 9695 SLSYHRMWMVR True NCI_RA007_Epitope_Rep2 1464.7118445964 1464.7107499358601 42.331 2 -1.1544687608124533 0.3605343492191639 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 113779 23316 TMRPYIQEQ True NCI_RA007_Epitope_Rep4 1164.5597435457598 1164.55810490379 101.25 3 -1.1545430319751695 0.36056558317881965 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 63167 17126 LLRQQNLF True PC9_epitope_Rep4 1030.5923640033798 1030.59126993586 73.877 2 -1.1545439220545126 0.36056558317881965 1.0 ['ENSG00000186130|ENST00000373659|ZBTB6'] 104620 14211 SQSLRLPL True PC9_epitope_Rep3 912.53926580136 912.53816993586 59.749 2 -1.154557026679254 0.36056558317881965 1.0 ['ENST00000380007.2_1_5:94956482-94957517:+|nuORF'] 25401 19524 FEDENFIESSV True NCI_RA007_Epitope_Rep5 1314.56157693722 1314.5599349037902 81.985 3 -1.1545670217539878 0.36056558317881965 1.0 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000459929.5_1_1:185275751-185278625:-|nuORF'] 18589 9070 EKQRHWLEPNK True NCI_RA007_Epitope_Rep1 1463.7633454919498 1463.7622499358602 39.285 2 -1.1546145989104282 0.36056558317881965 1.0 ['nc|ENSG00000172159|A2A2Y4-5|FRMD3', 'nc|ENSG00000172159|A2A2Y4-2|FRMD3', 'ENSG00000172159|ENST00000304195|FRMD3'] 85484 12591 QFPGNSVAP True PC9_epitope_Rep1 915.4450310633499 915.4444849679301 53.299 1 -1.1546184254151697 0.36056558317881965 1.0 ['ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 89042 14978 QVLHVQLSL True PC9_epitope_Rep4 1035.6076797143498 1035.60658993586 65.551 2 -1.1546214947651088 0.36056558317881965 1.0 ['ENST00000303545.3_1_8:125487403-125498198:+|nuORF'] 122556 15065 VGFAAFSV True PC9_epitope_Rep6 796.41194002992 796.41084993586 69.997 2 -1.154728728043646 0.3606195527414452 1.0 ['ENSG00000177721|ENST00000616064|ANXA2R'] 63698 20919 LMWEVRGSK True PC9_epitope_Rep1 1104.5749996870798 1104.57390993586 85.287 2 -1.1547516527913821 0.3606195527414452 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF', 'nc|ENSG00000138738|Q9NQX1-3|PRDM5', 'ENST00000505484.5_1_4:121737976-121843799:-|nuORF', 'PRDM5|p.F329Sfs*16|1|0.21|ENSG00000138738|chr4:120799692-120799705|ATTAGCTGAAATAA/-|frameshift_variant', 'PRDM5|p.A411Lfs*14|1|0.1|ENSG00000138738|chr4:120785049-120785049|C/-|frameshift_variant', 'PRDM5|p.K303Sfs*24|1|0.21|ENSG00000138738|chr4:120811407-120811407|T/-|frameshift_variant', 'nc|ENSG00000138738|Q9NQX1-4|PRDM5', 'nc|ENSG00000138738|Q9NQX1-2|PRDM5', 'ENSG00000138738|ENST00000264808|PRDM5'] 83106 18906 PSPPKAFAV True PC9_epitope_Rep4 912.5069030439199 912.50580993586 80.808 2 -1.154809432109598 0.3606276171737047 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 57694 7034 LEEIESQIQK True H1975_Epitope_Rep1 1215.63468230783 1215.63358993586 32.091 2 -1.1548945671172148 0.36068613230749824 1.0 ['nc|ENSG00000165794|Q9NP94-2|SLC39A2', 'ENSG00000165794|ENST00000298681|SLC39A2'] 121139 23316 VERVLRDLRI True PC9_epitope_Rep3 1267.77245362367 1267.7713499358601 94.964 2 -1.1549292476905573 0.3606977096155787 1.0 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000583850.5_1_17:7127146-7127844:+|nuORF'] 81671 18926 PLLQAHHA True PC9_epitope_Rep1 885.48208527841 885.48098993586 77.583 2 -1.1549300057932455 0.3606977096155787 1.0 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 20808 15357 EQIGTQVIHK True PC9_epitope_Rep4 1151.62987171091 1151.6287699358602 67.002 2 -1.1549413899447896 0.3606977096155787 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 84978 7227 QEETKTVL True PC9_epitope_Rep3 946.4971262058599 946.49602993586 32.811 2 -1.1550486631981092 0.36079405718321583 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 49787 23466 KHFVGWNKPIA True PC9_epitope_Rep1 1295.7138761183899 1295.71222490379 95.047 3 -1.1550585043394448 0.3608091406663808 1.0 ['ENST00000224140.5_1_9:135218093-135221659:-|nuORF'] 84791 23277 QDYDYHFWEEF True PC9_epitope_Rep5 1577.6099241119698 1577.60882993586 94.522 2 -1.1550702794139105 0.3608091406663808 1.0 ['ENSG00000135220|ENST00000251566|UGT2A3'] 3001 18303 AFIIFLTTYGY True NCI_RA007_Epitope_Rep1 1307.68017594827 1307.67906993586 75.333 2 -1.1550867186487495 0.3608091406663808 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|204|3|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|4', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|4', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|4', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|4', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|0|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|4', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|4'] 119266 25523 VALKPLGGL True PC9_epitope_Rep1 866.5589386167799 866.55784993586 103.17 2 -1.1550874866840715 0.3608091406663808 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 59670 11914 LGALDRLAAL True PC9_epitope_Rep1 1011.6076797143498 1011.60658993586 50.694 2 -1.1550956100654912 0.3608091406663808 1.0 ['ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 101453 9067 SLKYECRPEYY True PC9_epitope_Rep5 1449.6598515098501 1449.6587499358602 39.821 2 -1.155116865783586 0.36082526230831313 1.0 ['ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF', 'nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1'] 47500 7256 IVQQKREADEQ True NCI_RA007_Epitope_Rep1 1342.6840921117398 1342.6829899358602 32.214 2 -1.155133556921242 0.36082526230831313 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 67890 19474 LTAVIREDP True PC9_epitope_Rep2 1012.55530978832 1012.55420993586 80.286 2 -1.1553430533207112 0.3608585444594373 1.0 ['ENSG00000164512|ENST00000341048|ANKRD55'] 18474 11499 EKEALKQEVM-[Oxidation] True H1975_Epitope_Rep1 1219.6118390687097 1219.6107499358602 49.215 2 -1.1553663115278459 0.3608736223550478 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 3311 13826 AGGGADGF True NCI_RA007_Epitope_Rep3 650.2660040722201 650.26545496793 61.715 1 -1.1553808168181763 0.3608736223550478 1.0 ['ENSG00000171055|ENST00000405912|FEZ2', 'nc|ENSG00000171055|Q9UHY8-2|FEZ2'] 119972 13700 VDPLPFPGPFP True PC9_epitope_Rep1 1181.6120963884498 1181.61046490379 57.548 3 -1.1553815032109604 0.3608736223550478 1.0 ['nc|ENSG00000173153|P11474-2|ESRRA', 'ENSG00000173153|ENST00000000442|ESRRA'] 112152 6653 TIYYGEQR True NCI_RA007_Epitope_Rep5 1028.4927095317598 1028.4916099358602 32.26 2 -1.1553923796919656 0.3608736223550478 1.0 ['ENSG00000127083|ENST00000375550|OMD'] 57548 12137 LEDRKYLP True PC9_epitope_Rep3 1032.56039516876 1032.55928993586 51.725 2 -1.155411854025759 0.3608736223550478 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000479983.1_1_1:62958359-62960107:-|nuORF'] 95168 7615 RVGWDAEYAR True PC9_epitope_Rep1 1221.58906952809 1221.58741490379 34.111 3 -1.1554498750452364 0.3608942915148229 1.0 ['ENST00000274031.7_1_4:140477471-140477915:-|nuORF'] 27518 18457 FMRKKKALA True NCI_RA007_Epitope_Rep5 1091.6637551218298 1091.6626499358601 77.822 2 -1.155469496874233 0.3608967569475967 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'CFAP54|p.L1793Gfs*13|1|0.13|ENSG00000188596|chr12:96658260-96658285|CAGCTTCTGCTGAGAATACAGAAGTT/-|frameshift_variant', 'ENST00000554621.1_1_12:96883387-96894780:+|nuORF'] 98766 20768 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 85.996 3 -1.1554700413047914 0.3608967569475967 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 99898 7928 SILWMEPSRAT True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 35.476 3 -1.1554717495052684 0.3608967569475967 1.0 ['SIK2|p.Y846Ifs*32|1|0.3|ENSG00000170145|chr11:111723882-111723882|C/-|frameshift_variant'] 23285 13808 EVQAILRRNW True PC9_epitope_Rep3 1283.7098533671099 1283.7087499358602 58.19 2 -1.155501339996643 0.3608967569475967 1.0 ['ENSG00000064989|ENST00000392370|CALCRL'] 84502 20686 QAMDDLMLSPD True PC9_epitope_Rep2 1234.52097507854 1234.51986993586 85.004 2 -1.1555115807599807 0.3608967569475967 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.R249Gfs*96|1|0.62|ENSG00000141510|chr17:7674219-7674219|C/-|frameshift_variant', 'TP53|p.E294Sfs*51|2|0.21|ENSG00000141510|chr17:7673740-7673740|C/-|frameshift_variant', 'TP53|p.H296Tfs*49|1|0.33|ENSG00000141510|chr17:7673734-7673734|G/-|frameshift_variant', 'TP53|p.K305Efs*39|1|0.28|ENSG00000141510|chr17:7673704-7673707|GCTT/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.Y220Mfs*27|1|0.41|ENSG00000141510|chr17:7674874-7674874|G/-|frameshift_variant', 'TP53|p.C229Yfs*10|1|0.32|ENSG00000141510|chr17:7674276-7674277|AC/-|frameshift_variant', 'TP53|p.L201Ffs*8|1|0.39|ENSG00000141510|chr17:7674928-7674929|-/A|frameshift_variant', 'TP53|p.H178Tfs*69|1|0.12|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.V173Afs*69|1|0.24|ENSG00000141510|chr17:7675079-7675094|TGGGGGCAGCGCCTCA/-|frameshift_variant', 'TP53|p.D148Ifs*22|1|0.23|ENSG00000141510|chr17:7675171-7675171|A/-|frameshift_variant', 'TP53|p.P152Rfs*18|1|0.52|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant', 'TP53|p.G154Afs*16|2|0.47|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.K139Rfs*31|1|0.74|ENSG00000141510|chr17:7675196-7675196|T/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.51|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.R156Afs*13|1|0.42|ENSG00000141510|chr17:7675113-7675147|GTGACTGCTTGTAGATGGCCATGGCGCGGACGCGG/-|frameshift_variant', 'TP53|p.A138Cfs*27|1|0.2|ENSG00000141510|chr17:7675185-7675200|CAGGGCAGGTCTTGGC/-|frameshift_variant', 'TP53|p.N131Kfs*39|1|0.6|ENSG00000141510|chr17:7675219-7675219|G/-|frameshift_variant', 'TP53|p.A69Gfs*80|1|0.56|ENSG00000141510|chr17:7676163-7676164|-/C|frameshift_variant', 'TP53|p.H115Vfs*28|1|0.26|ENSG00000141510|chr17:7676011-7676027|TGGCTGTCCCAGAATGC/-|frameshift_variant', 'TP53|p.F54Sfs*69|1|0.96|ENSG00000141510|chr17:7676208-7676208|A/-|frameshift_variant', 'TP53|p.S90Pfs*33|1|0.15|ENSG00000141510|chr17:7676102-7676102|G/-|frameshift_variant', 'TP53|p.V73Wfs*50|2|0.26|ENSG00000141510|chr17:7676152-7676152|C/-|frameshift_variant'] 85569 8088 QGEVTVASIDD True PC9_epitope_Rep3 1132.52479750568 1132.52370993586 36.085 2 -1.155596318876497 0.360899222069522 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 82347 16224 PPLEPGRR True NCI_RA007_Epitope_Rep3 920.5191990631199 920.51810993586 71.506 2 -1.1556081238129061 0.360899222069522 1.0 ['ENST00000392197.6_1_19:36206342-36206675:+|nuORF'] 75082 21891 NHVLPLKRLIL True NCI_RA007_Epitope_Rep5 1314.84997566838 1314.84832490379 91.33 3 -1.1556844238525634 0.360899222069522 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'ENSG00000121440|ENST00000263666|PDZRN3', 'nc|ENSG00000121440|Q9UPQ7-2|PDZRN3'] 18493 10580 EKETIKAAL True NCI_RA007_Epitope_Rep5 1001.5757108797297 1001.5746099358599 47.33 2 -1.1556848431667641 0.360899222069522 1.0 ['ENSG00000151689|ENST00000392329|INPP1'] 101948 8600 SLQDRYVP True PC9_epitope_Rep6 976.4977949122 976.49668993586 42.888 2 -1.1557084268865956 0.360899222069522 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A'] 99993 10271 SIPPTNHEI True PC9_epitope_Rep2 1006.5083595959001 1006.50726993586 44.84 2 -1.1557520333469733 0.36093249615452505 1.0 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'PTPRD|p.A273Qfs*4|1|0.11|ENSG00000153707|chr9:8521421-8521421|C/-|frameshift_variant'] 64102 9401 LPDLWYRLYHL True PC9_epitope_Rep2 1487.79252036191 1487.7908849037901 41.5 3 -1.1558676393022556 0.36096927518690824 1.0 ['ENST00000568239.1_16:18890830-18890872:-|nuORF'] 122636 6035 VGFVVPFTIML True NCI_RA007_Epitope_Rep4 1221.6831531537298 1221.68149490379 29.831 3 -1.155869317928051 0.36096927518690824 1.0 ['ENSG00000134817|ENST00000606794|APLNR'] 38689 11230 HGAGGGWG True NCI_RA007_Epitope_Rep5 697.29322187957 697.2926749679301 49.834 1 -1.1558720203834612 0.36096927518690824 1.0 ['ENST00000582754.5_1_17:39081604-39092927:-|nuORF', 'ENSG00000108244|ENST00000209718|KRT23', 'CON__Q9C075'] 101312 10228 SLINLQTL True PC9_epitope_Rep2 900.5280324113199 900.52692993586 44.678 2 -1.1559163075566339 0.36098538811634034 1.0 ['ENST00000482284.5_1_1:155580039-155581071:+|nuORF'] 36323 19525 GVELFGKLV True PC9_epitope_Rep3 960.5644179200399 960.56332993586 80.334 2 -1.1559262994163595 0.36098538811634034 1.0 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 71635 10013 MDRLDRIL True NCI_RA007_Epitope_Rep2 1030.5593496229399 1030.5582499358602 43.56 2 -1.15604750287003 0.36105543158982895 1.0 ['ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2'] 69307 12510 LTVEDHLWFY True NCI_RA007_Epitope_Rep2 1321.6342883850098 1321.6331899358602 53.273 2 -1.1560735965232678 0.36105543158982895 1.0 ['ABCA2|p.E1084D|1|0.08|ENSG00000107331|chr9:137016027-137016027|T/G|missense_variant'] 141581 6865 YTQDHNNAR True H1975_Epitope_Rep1 1117.49008376281 1117.4889899358602 31.45 2 -1.1561033836233574 0.36105543158982895 1.0 ['PAPSS1|p.R139H|1|0.25|ENSG00000138801|chr4:107687173-107687173|C/T|missense_variant'] 19667 10734 ELREMIQLPG True PC9_epitope_Rep2 1184.6223438023198 1184.62124993586 46.607 2 -1.156125339840931 0.36105543158982895 1.0 ['nc|ENSG00000161513|P22570-4|FDXR', 'nc|ENSG00000161513|P22570-6|FDXR', 'nc|ENSG00000161513|P22570-5|FDXR', 'ENST00000577509.5_1_17:72858941-72868963:-|nuORF', 'nc|ENSG00000161513|P22570|FDXR', 'ENSG00000161513|ENST00000293195|FDXR', 'nc|ENSG00000161513|P22570-2|FDXR', 'nc|ENSG00000161513|P22570-7|FDXR', 'nc|ENSG00000161513|P22570-3|FDXR', 'ENST00000579482.5_1_17:72859347-72866165:-|nuORF'] 112062 13649 TITHLLRTHL True NCI_RA007_Epitope_Rep1 1203.70879073795 1203.7076899358601 57.104 2 -1.15619181337215 0.361063486460592 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5', 'ENST00000475300.1_1_10:45935943-45936950:+|nuORF'] 63313 15864 LLSVAVPIR True PC9_epitope_Rep4 966.6226015025 966.62150993586 68.951 2 -1.1562119377085682 0.3610715411282698 1.0 ['ENST00000579125.1_1_17:62776100-62776705:-|nuORF', 'ENST00000578036.5_1_17:62775732-62776705:-|nuORF'] 102186 4247 SLRVLRVLRPL True H1975_Epitope_Rep2 1320.8717737421198 1320.8701349037901 21.447 3 -1.1563074017059112 0.36111636349884657 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 101900 13792 SLPSPHDVL True PC9_epitope_Rep2 963.50254593947 963.50144993586 58.335 2 -1.156322949803234 0.36111636349884657 1.0 ['TRIL|p.T434Nfs*192|1|0.12|ENSG00000255690|chr7:28956746-28956747|-/T|frameshift_variant', 'ENSG00000255690|ENST00000539664|TRIL'] 49837 16419 KHYLLPAI True PC9_epitope_Rep5 953.5698376536499 953.56874993586 68.156 2 -1.1563236349371746 0.36111636349884657 1.0 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'ENST00000593636.1_1_19:50321571-50322554:+|nuORF', 'nc|ENSG00000104973|Q71SY5-6|MED25', 'ENST00000593595.1_1_19:50321571-50321933:+|nuORF'] 80324 14238 PGGGGGGC True NCI_RA007_Epitope_Rep4 560.2012956406801 560.2007449679301 62.048 1 -1.1563313246576117 0.36111636349884657 1.0 ['ENSG00000169991|ENST00000455833|IFFO2'] 23611 4209 EWLNKHSMQNR True NCI_RA007_Epitope_Rep2 1441.6884662995299 1441.68736993586 21.011 2 -1.1563543946412846 0.3611370225639733 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 27244 10572 FLPLNTPV True NCI_RA007_Epitope_Rep1 899.51165407119 899.51054993586 45.106 2 -1.1563649832930238 0.36114507569550364 1.0 ['nc|ENSG00000060709|O15034-3|RIMBP2', 'nc|ENSG00000060709|O15034|RIMBP2', 'ENSG00000060709|ENST00000690449|RIMBP2'] 10597 16569 CNGNNKAE True NCI_RA007_Epitope_Rep5 848.34466539908 848.34356993586 70.492 2 -1.156378436223324 0.3611657338778803 1.0 ['ENST00000485596.5_1_15:85634092-85681131:+|nuORF', 'nc|ENSG00000073417|O60658-6|PDE8A', 'nc|ENSG00000073417|O60658-2|PDE8A', 'ENSG00000073417|ENST00000394553|PDE8A', 'ENST00000561105.1_1_15:85643228-85643452:+|nuORF'] 63150 14757 LLRMHRQFMRR True H1975_Epitope_Rep3 1542.8500098350598 1542.84890993586 62.141 2 -1.156444887842449 0.36119339022146035 1.0 ['ENSG00000171522|ENST00000302472|PTGER4'] 18666 19537 ELADNLTGF True PC9_epitope_Rep1 978.46582607758 978.46472993586 79.972 2 -1.1564785514980538 0.36119339022146035 1.0 ['STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 82015 11563 PLVNPPGL True H1975_Epitope_Rep1 805.46978925921 805.46868993586 49.463 2 -1.1564898715832457 0.36119339022146035 1.0 ['nc|ENSG00000136487|P01242-2|GH2'] 15935 6846 EDLTQVLLSCH True H1975_Epitope_Rep1 1256.6070876610002 1256.6059899358602 31.377 2 -1.156495245339449 0.36119339022146035 1.0 ['ENST00000216039.9_1_22:39083550-39083643:-|nuORF'] 37652 7704 GVWPRTWPH True NCI_RA007_Epitope_Rep4 1134.57229726514 1134.57064490379 36.302 3 -1.1565398747588729 0.36119339022146035 1.0 ['ENSG00000006282|ENST00000006658|SPATA20'] 29563 19690 FVIDLQTRL True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 83.859 2 -1.1565912956666529 0.3611968892978233 1.0 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 72736 20937 MNKAHGCE True NCI_RA007_Epitope_Rep5 888.3582072882399 888.35710993586 87.533 2 -1.1565937281002776 0.3611968892978233 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 44436 17144 ILHSLKTQSL True PC9_epitope_Rep6 1138.6710082469 1138.66990993586 78.53 2 -1.1567177126666817 0.3612301487269977 1.0 ['ENSG00000181958|ENST00000641526|OR4A15', 'nc|ENSG00000181958|Q8NGL6|OR4A15'] 75432 23588 NIVQNRSKIRR True PC9_epitope_Rep3 1382.82186342758 1382.82022490379 96.015 3 -1.1567219588835347 0.3612381996697798 1.0 ['ENSG00000256394|ENST00000537611|ASIC5'] 129115 8302 VQQLWNTFWIL True H1975_Epitope_Rep3 1446.7659712609 1446.7648699358601 36.917 2 -1.156762164265563 0.3612451950343437 1.0 ['ENST00000368173.7_1_1:158068274-158068373:+|nuORF'] 116682 19652 TVCIFHIL True PC9_epitope_Rep5 944.5153595526399 944.5142699358599 80.648 2 -1.156893532150119 0.3612451950343437 1.0 ['ENST00000494462.1_1_2:183586783-183593427:+|nuORF'] 9012 6818 AVGSGRSDLL True NCI_RA007_Epitope_Rep5 973.51925863277 973.51816993586 32.911 2 -1.1569777874504457 0.3612451950343437 1.0 ['ENST00000571595.5_1_17:1617240-1619595:-|nuORF'] 63526 10719 LLYNVSGS True PC9_epitope_Rep6 851.43888305375 851.43778993586 52.043 2 -1.1569817053846636 0.3612451950343437 1.0 ['nc|ENSG00000076706|P43121-2|MCAM'] 135015 9525 WDASFGDQRNI True PC9_epitope_Rep5 1307.5894634509098 1307.58836993586 41.597 2 -1.15700677356253 0.36125324528016534 1.0 ['ENST00000537045.5_1_22:19024355-19024484:-|nuORF'] 48747 9251 KDFYALYPTLQ True NCI_RA007_Epitope_Rep2 1357.6918032611297 1357.69070993586 40.593 2 -1.1570602517625188 0.3612773948001865 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13'] 81757 24953 PLPHRRGG True NCI_RA007_Epitope_Rep3 888.5042177053199 888.50312993586 107.88 2 -1.1570651449002167 0.3612773948001865 1.0 ['ENST00000272849.7_2_2:206610606-206614560:+|nuORF'] 7737 12748 ASPLTPCSV True PC9_epitope_Rep4 873.42660411789 873.4260549679301 56.896 1 -1.157121954484151 0.3612773948001865 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 78979 24250 PAKAKLTKLKM True NCI_RA007_Epitope_Rep2 1227.77369949363 1227.7720649037901 101.84 3 -1.157202814493982 0.36129487518743936 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.R1075*|1|0.13|ENSG00000172493|chr4:87132334-87132341|GTATTCTC/-|frameshift_variant', 'ENST00000504956.5_1_4:87856214-87968836:+|nuORF'] 67581 14094 LSTYSCCI True PC9_epitope_Rep6 888.37212601688 888.37102993586 66.084 2 -1.157223209800693 0.36129487518743936 1.0 ['ENST00000376436.5_1_20:25655347-25655485:-|nuORF'] 66584 13797 LSILQMHRENK True H1975_Epitope_Rep1 1367.73435386279 1367.7332499358602 58.213 2 -1.1572232552566686 0.36129487518743936 1.0 ['ENST00000524914.5_1_14:67667213-67667267:+|nuORF'] 140619 23494 YRRQLQARTIE True NCI_RA007_Epitope_Rep3 1432.7898945929594 1432.7887899358602 101.95 2 -1.1572462960157497 0.36129487518743936 1.0 ['ENSG00000148798|ENST00000369849|INA'] 34163 16087 GNFKFWDTEL True PC9_epitope_Rep4 1255.5873381925899 1255.58624993586 69.814 2 -1.157253057096196 0.36129487518743936 1.0 ['ENST00000262394.6_2_17:25639733-25639799:+|nuORF'] 85116 8158 QELLRTAP True H1975_Epitope_Rep2 926.5185303567799 926.51742993586 36.331 2 -1.1572879209746623 0.36129487518743936 1.0 ['ENST00000572710.5_1_17:55058482-55065084:+|nuORF'] 30338 5549 GAAPWWWL True PC9_epitope_Rep1 985.4810226492499 985.47992993586 26.174 2 -1.1572978814857198 0.36129487518743936 1.0 ['nc|ENSG00000171867|F7VJQ1|PRNP'] 110580 6820 TFRRMWKWLQE True H1975_Epitope_Rep1 1579.8081875093897 1579.8065549037901 31.275 3 -1.1573069574430033 0.36129487518743936 1.0 ['ENSG00000205922|ENST00000382349|ONECUT3', 'ENSG00000119547|ENST00000491143|ONECUT2', 'ENSG00000169856|ENST00000305901|ONECUT1'] 18404 19230 EIVLKIHFE True PC9_epitope_Rep4 1126.63864548946 1126.63754993586 82.068 2 -1.1573432116843159 0.36129487518743936 1.0 ['nc|ENSG00000163535|Q562F6-3|SGO2'] 23736 12972 EYFVYTIRDR True PC9_epitope_Rep5 1360.6775501793197 1360.67644993586 54.906 2 -1.157367393994434 0.36129487518743936 1.0 ['ENSG00000119900|ENST00000370435|OGFRL1'] 62482 6515 LLIFFSPFPP True H1975_Epitope_Rep1 1176.65831830488 1176.6572299358602 30.12 2 -1.1574677409080356 0.3613225139861902 1.0 ['ENST00000326764.9_2_19:54972239-54972944:+|nuORF', 'nc|ENSG00000167615|Q96PV6-1|LENG8'] 83977 21902 PVSIEEVPP True PC9_epitope_Rep1 965.5069626135698 965.50641496793 89.059 1 -1.1575418129325004 0.3613225139861902 1.0 ['nc|ENSG00000163406|Q16348-2|SLC15A2', 'ENSG00000163406|ENST00000489711|SLC15A2', 'SLC15A2|p.V229*|1|0.12|ENSG00000163406|chr3:121915680-121915680|G/-|frameshift_variant', 'SLC15A2|p.D505Ifs*10|1|0.07|ENSG00000163406|chr3:121929307-121929307|G/-|frameshift_variant'] 8551 5663 ATVDNWSQIQS True H1975_Epitope_Rep1 1247.57823006087 1247.57712993586 26.852 2 -1.1575894977262375 0.3613225139861902 1.0 ['ENSG00000198203|ENST00000251481|SULT1C2', 'nc|ENSG00000198203|O00338-2|SULT1C2'] 70028 11947 LVMLERWTN True PC9_epitope_Rep1 1160.6012144349197 1160.60010993586 50.82 2 -1.15762460305321 0.3613225139861902 1.0 ['ENST00000309964.8_1_4:56342137-56348912:-|nuORF'] 135790 11578 WMWWRRNRRGK True H1975_Epitope_Rep1 1630.8527867163796 1630.8516899358601 49.521 2 -1.157662990123536 0.3613225139861902 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 70697 13113 LWLTFMYFFWK True NCI_RA007_Epitope_Rep1 1580.7890152046 1580.7879099358602 55.002 2 -1.1576900063860933 0.36134316134316136 1.0 ['ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A', 'ENST00000528944.5_1_1:145803383-145811444:-|nuORF', 'ENST00000460277.5_1_1:145765021-145811987:-|nuORF'] 123905 5445 VGRRSPGN True PC9_epitope_Rep1 841.4518477792899 841.45074993586 25.777 2 -1.1577273176357614 0.36135120832598344 1.0 ['ENSG00000178605|ENST00000326153|GTPBP6'] 22778 5423 ETWNVKAS True NCI_RA007_Epitope_Rep1 933.4555957470499 933.45448993586 25.167 2 -1.1577645090246937 0.36135925510602646 1.0 ['ENSG00000102805|ENST00000377453|CLN5'] 78726 4853 PAAANVRK True PC9_epitope_Rep4 825.48208527841 825.48098993586 25.256 2 -1.1578137645027515 0.3613676161201325 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 126930 13090 VLREFLRLA True NCI_RA007_Epitope_Rep4 1115.68151336095 1115.68040993586 57.451 2 -1.1578800164312233 0.3613676161201325 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.L1842Ffs*52|1|0.2|ENSG00000163625|chr4:84755299-84755300|-/A|frameshift_variant', 'WDFY3|p.N1161Kfs*4|1|0.29|ENSG00000163625|chr4:84794523-84794524|-/T|frameshift_variant'] 108103 9052 SYDCEVNAPIQ True H1975_Epitope_Rep2 1237.52850298713 1237.52740993586 39.771 2 -1.1578890800680244 0.3613676161201325 1.0 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A'] 20938 5891 EQNWRQHREAY True H1975_Epitope_Rep1 1515.69672248411 1515.69562993586 27.729 2 -1.157893856470236 0.3613676161201325 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 78725 5337 PAAANVRK True PC9_epitope_Rep3 825.48208527841 825.48098993586 25.606 2 -1.157917108364052 0.3613676161201325 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 67874 2921 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 14.861 3 -1.1579267885282933 0.3613676161201325 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 46167 12839 ISLNLFFLYIF True H1975_Epitope_Rep3 1388.77441068628 1388.7733099358602 54.606 2 -1.1579795369245365 0.3613676161201325 1.0 ['ENST00000579991.2_1_17:56167288-56167468:+|nuORF'] 26618 12243 FILVLNEKK True PC9_epitope_Rep1 1102.67503099818 1102.67392993586 51.952 2 -1.1579923321966992 0.3613676161201325 1.0 ['ENST00000509268.1_1_5:82400738-82554497:+|nuORF', 'nc|ENSG00000152422|Q13426-3|XRCC4', 'ENST00000542685.5_1_5:82400738-82606644:+|nuORF', 'ENSG00000152422|ENST00000396027|XRCC4', 'nc|ENSG00000152422|Q13426|XRCC4'] 60328 13119 LGSLAAGSFPL True PC9_epitope_Rep6 1031.56514619603 1031.56404993586 62.091 2 -1.1580198531933528 0.3613676161201325 1.0 ['ENST00000511553.5_1_4:24582539-24585825:-|nuORF'] 12189 14949 DIFKHLRWWW True NCI_RA007_Epitope_Rep2 1485.7669743204099 1485.76586993586 62.829 2 -1.1580351640300277 0.3613676161201325 1.0 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF'] 81775 7862 PLPMPFTP True PC9_epitope_Rep5 898.46226135062 898.46116993586 35.185 2 -1.1580365894054319 0.3613676161201325 1.0 ['ENSG00000102313|ENST00000218436|ITIH6'] 122021 17371 VFVMTILII True NCI_RA007_Epitope_Rep3 1047.6402257125899 1047.6391299358602 76.23 2 -1.1580521535606862 0.3613676161201325 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 37060 8852 GVPLMFII True NCI_RA007_Epitope_Rep4 888.51429692348 888.5131899358599 40.866 2 -1.1580813515938309 0.3613791539643748 1.0 ['ENSG00000147679|ENST00000309822|UTP23'] 26058 21011 FGIVSTLSV True PC9_epitope_Rep2 921.51713337445 921.51602993586 86.273 2 -1.1580824312485873 0.3613791539643748 1.0 ['GPR135|p.N464Kfs*23|1|0.18|ENSG00000181619|chr14:59463835-59463836|-/T|frameshift_variant', 'ENSG00000181619|ENST00000395116|GPR135'] 98111 9062 SESFRFSGL True H1975_Epitope_Rep2 1028.4927095317598 1028.4916099358602 39.81 2 -1.158090215149573 0.3613791539643748 1.0 ['ENST00000409936.5_2_2:44587175-44588600:-|nuORF', 'ENST00000410081.5_2_2:44586875-44588600:-|nuORF', 'ENST00000409411.5_3_2:44573515-44588600:-|nuORF', 'ENST00000438314.1_3_2:44587786-44588600:-|nuORF'] 95590 9637 RWWFRRLFLIF True NCI_RA007_Epitope_Rep1 1638.9299573245796 1638.9283049037901 41.486 3 -1.1581435621711833 0.3613997959260799 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 79318 19773 PARFLPLPGL True PC9_epitope_Rep4 1079.6491506035097 1079.6480499358602 84.182 2 -1.158172289458037 0.36140328777476854 1.0 ['ENSG00000105550|ENST00000593756|FGF21'] 131527 6964 VTKSKTSP True PC9_epitope_Rep1 846.4810822189 846.47998993586 31.592 2 -1.1581991439762438 0.36140328777476854 1.0 ['ENST00000502249.6_1_4:119435248-119475252:+|nuORF', 'nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170'] 18861 8988 ELDRESWVREK True H1975_Epitope_Rep1 1445.72629127689 1445.72518993586 39.478 2 -1.1582193498623323 0.36141133197289194 1.0 ['ENSG00000197261|ENST00000529246|C6orf141'] 75656 21744 NLFMRNSL True PC9_epitope_Rep1 993.50658577409 993.5054899358599 88.471 2 -1.1582561532208253 0.3614319724891985 1.0 ['ENST00000418103.1_1_21:42742479-42748816:+|nuORF'] 31854 6688 GELADTPK True NCI_RA007_Epitope_Rep2 829.41814760917 829.4175949679301 30.628 1 -1.1583897425932903 0.3615029979341966 1.0 ['nc|ENSG00000143033|Q9Y483-3|MTF2', 'MTF2|p.A507Lfs*7|1|0.07|ENSG00000143033|chr1:93136761-93136770|AGAGCACTCC/-|frameshift_variant', 'nc|ENSG00000143033|Q9Y483-4|MTF2', 'ENSG00000143033|ENST00000370298|MTF2'] 89947 6574 RDAGRRTTCSP True H1975_Epitope_Rep3 1218.58875225826 1218.58764993586 30.242 2 -1.1584726630422342 0.36153623297938003 1.0 ['ZPLD1|p.W327C|1|0.67|ENSG00000170044|chr3:102470441-102470441|G/T|missense_variant'] 110253 10234 TERKLPARPR True NCI_RA007_Epitope_Rep1 1222.7258377844198 1222.72474993586 43.819 2 -1.1585330343995208 0.3615477629987908 1.0 ['ENST00000464242.1_1_3:128208704-128215621:+|nuORF'] 27148 8878 FLKQGHGG True NCI_RA007_Epitope_Rep3 842.43988611326 842.43878993586 42.013 2 -1.158569292491862 0.3615477629987908 1.0 ['nc|ENSG00000010803|Q96GD3-3|SCMH1', 'nc|ENSG00000010803|Q96GD3|SCMH1', 'ENSG00000010803|ENST00000695335|SCMH1', 'nc|ENSG00000010803|Q96GD3-6|SCMH1', 'nc|ENSG00000010803|Q96GD3-5|SCMH1', 'nc|ENSG00000010803|Q96GD3-4|SCMH1', 'nc|ENSG00000010803|Q96GD3-2|SCMH1'] 72278 9660 MIAAIHSSSA True PC9_epitope_Rep5 986.4855159763401 986.48440993586 42.124 2 -1.1586302561971895 0.3615477629987908 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32'] 57237 13259 LDWLEPSKP True PC9_epitope_Rep3 1083.5600608155898 1083.5589699358602 56.033 2 -1.158693999822944 0.36158099580567554 1.0 ['ENST00000294072.8_2_11:61116358-61116451:-|nuORF'] 111743 13111 TIHQLLHQF True PC9_epitope_Rep5 1135.61382772395 1135.61218490379 55.436 3 -1.158697296164874 0.36158448265004095 1.0 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B'] 125492 8838 VIYPYLLPFIS True H1975_Epitope_Rep1 1323.74786158527 1323.7467699358601 38.919 2 -1.1587289751660066 0.36158448265004095 1.0 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant', 'LTN1|p.L617Ffs*33|1|0.19|ENSG00000198862|chr21:28966643-28966643|A/-|frameshift_variant', 'nc|ENSG00000198862|O94822-2|LTN1'] 140682 16394 YRVHFLLERLQ True H1975_Epitope_Rep1 1472.8252174725199 1472.8241299358601 68.418 2 -1.1588081613248293 0.36159252355282384 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 6297 8748 APRLAYSSA True PC9_epitope_Rep4 934.4872302284999 934.48612993586 41.156 2 -1.1588339151193732 0.36161315918737486 1.0 ['ENSG00000104722|ENST00000221166|NEFM'] 105986 24835 SSTLVLIVLV True NCI_RA007_Epitope_Rep5 1042.66379760814 1042.66327496793 103.02 1 -1.158885498226313 0.36161557643384296 1.0 ['ENSG00000185742|ENST00000327419|C11orf87'] 140720 6751 YSCAHCRAHL True NCI_RA007_Epitope_Rep3 1159.5015174769899 1159.50040993586 33.646 2 -1.1588913698613497 0.36161557643384296 1.0 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3'] 1344 6567 AEDYRWWWRNF True H1975_Epitope_Rep1 1627.7320453636696 1627.73094993586 30.318 2 -1.1588957673911946 0.36161557643384296 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4'] 104615 20699 SQRWRLQLRRR True NCI_RA007_Epitope_Rep5 1553.9127441206497 1553.9116499358602 86.58 2 -1.1588972130507986 0.36161557643384296 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 121160 14305 VESAYLNL True H1975_Epitope_Rep1 907.4650978015899 907.46400993586 60.211 2 -1.1589121593825442 0.36161557643384296 1.0 ['ENSG00000182578|ENST00000675795|CSF1R'] 67832 14840 LTAIGHSS True NCI_RA007_Epitope_Rep5 784.4079172786401 784.40682993586 63.752 2 -1.159044767470773 0.36163514092134097 1.0 ['ENST00000579295.1_1_1:213037039-213043480:+|nuORF'] 109525 8953 TDQHSPIPL True NCI_RA007_Epitope_Rep4 1006.5083595958998 1006.50726993586 41.272 2 -1.159058991382527 0.36163514092134097 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 19379 15900 ELLRRKDTHIR True H1975_Epitope_Rep3 1435.83717913855 1435.8360899358602 66.608 2 -1.1591099208348108 0.36163514092134097 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000476207.1_1_10:119765292-119774614:-|nuORF'] 63238 11779 LLSKLANT True H1975_Epitope_Rep3 858.51746772762 858.51636993586 50.452 2 -1.1591413903250998 0.36163514092134097 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 124018 7132 VGSGHLPV True NCI_RA007_Epitope_Rep3 764.41808803952 764.41698993586 35.174 2 -1.159233037444963 0.3616512190207536 1.0 ['nc|ENSG00000075856|Q15020-3|SART3'] 117415 17721 TVPSEAIRGL True PC9_epitope_Rep5 1041.5818588893299 1041.5807699358602 73.18 2 -1.1592502102146738 0.3616512190207536 1.0 ['ENSG00000205213|ENST00000379214|LGR4', 'nc|ENSG00000205213|Q9BXB1-2|LGR4', 'LGR4|p.G317Efs*8|1|0.12|ENSG00000205213|chr11:27380292-27380292|C/-|frameshift_variant'] 9055 8109 AVHSQTIQIP True NCI_RA007_Epitope_Rep2 1092.5927579262 1092.5916699358602 36.176 2 -1.159318277337172 0.3616798891827226 1.0 ['ENSG00000187498|ENST00000375820|COL4A1'] 129878 22219 VRRVLQIPMW True PC9_epitope_Rep6 1296.7488817281198 1296.74722490379 98.422 3 -1.1593467652132805 0.3616798891827226 1.0 ['KCNT2|p.I629Mfs*5|1|0.2|ENSG00000162687|chr1:196333957-196333957|A/-|frameshift_variant', 'KCNT2|p.S950Lfs*28|1|0.58|ENSG00000162687|chr1:196280921-196280921|G/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2', 'ENST00000498426.5_1_1:196286396-196434478:-|nuORF', 'KCNT2|p.Q343H|2|0.22|ENSG00000162687|chr1:196425944-196425944|C/A|missense_variant'] 63986 4286 LNVRLDYR True NCI_RA007_Epitope_Rep4 1047.58252759567 1047.5814299358601 22.821 2 -1.159434375707265 0.36168337279000656 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant', 'ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 112694 8532 TLGIKLELK True NCI_RA007_Epitope_Rep4 1013.6484818971699 1013.64738993586 39.611 2 -1.1594360291250474 0.36168337279000656 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 80172 19708 PFTLSRVP True PC9_epitope_Rep2 915.5178020807899 915.51670993586 81.194 2 -1.1594442976615484 0.3616903394781908 1.0 ['ENST00000530686.5_1_11:27679821-27680730:+|nuORF'] 135577 5498 WKYLFCMMTSF True H1975_Epitope_Rep2 1455.6389224665897 1455.63782993586 26.161 2 -1.15946284097046 0.3616903394781908 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|106|2|anti-sense'] 79715 11724 PDVERLKE True PC9_epitope_Rep1 984.5240096600398 984.52290993586 49.972 2 -1.1594886837098672 0.3616903394781908 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 55764 6545 LALYFKKRTM True H1975_Epitope_Rep1 1269.7267493012098 1269.72511490379 30.233 3 -1.159495258516022 0.3616903394781908 1.0 ['ENSG00000095464|ENST00000371447|PDE6C', 'ENST00000508173.5_1_5:149240460-149276122:-|nuORF', 'ENSG00000132915|ENST00000255266|PDE6A'] 20979 5392 EQQMRHYMRFQ True H1975_Epitope_Rep3 1552.70273646468 1552.7016299358602 25.805 2 -1.159575412292798 0.36171445120185347 1.0 ['ENSG00000102409|ENST00000372695|BEX4'] 116062 22449 TSPPQPAARP True PC9_epitope_Rep6 1020.5352430500799 1020.53414993586 99.346 2 -1.1596075795526413 0.36171445120185347 1.0 ['CON__Q58D62'] 132072 16496 VTTLLTTI True PC9_epitope_Rep4 860.5218844017201 860.5213349679301 71.421 1 -1.1596163242465867 0.36171445120185347 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 79674 7351 PDSATDSQLQ True NCI_RA007_Epitope_Rep2 1060.46728262956 1060.46618993586 33.216 2 -1.1597266845942573 0.361735079325107 1.0 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'ENST00000497209.5_1_20:61299742-61303242:+|nuORF'] 99739 21672 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.61132993586 88.19 2 -1.1597505338029301 0.36174552413567346 1.0 ['ENSG00000172531|ENST00000376745|PPP1CA', 'PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 64126 11251 LPELPSVTR True NCI_RA007_Epitope_Rep4 1010.5760452329 1010.57494993586 50.168 2 -1.159781599474569 0.36174552413567346 1.0 ['ENSG00000059691|ENST00000263985|GATB'] 82440 21377 PPPNWRRPVYE True H1975_Epitope_Rep3 1409.72041805081 1409.71932993586 89.324 2 -1.159794080530482 0.36174552413567346 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 28621 16487 FSICCLSFFP True H1975_Epitope_Rep2 1162.5191246037398 1162.51802993586 68.635 2 -1.1598567531468467 0.36174552413567346 1.0 ['ENST00000601296.2_1_20:62495142-62495376:-|nuORF'] 86382 9170 QKEEYIHLERK True NCI_RA007_Epitope_Rep2 1471.7783268497499 1471.77722993586 40.277 2 -1.1598907763694497 0.36174552413567346 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 2650 6223 AESLKENAFN True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 28.9 2 -1.1599016370672204 0.36174552413567346 1.0 ['nc|ENSG00000141068|Q8IVT5-4|KSR1', 'nc|ENSG00000141068|Q8IVT5-3|KSR1', 'nc|ENSG00000141068|Q8IVT5|KSR1'] 20942 5853 EQNWRQHREAY True NCI_RA007_Epitope_Rep3 1515.69672248411 1515.69508490379 30.0 3 -1.1599601134145814 0.36176615004973117 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 15815 19842 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 83.233 2 -1.1599682792783481 0.3617741854257944 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 5391 12233 ALSQTVSPA True PC9_epitope_Rep4 872.4603467743199 872.45924993586 54.873 2 -1.1599905422443157 0.3617776658693189 1.0 ['nc|ENSG00000224975|O15225|INE1'] 82174 5307 PNQRAFSTSTH True NCI_RA007_Epitope_Rep2 1244.58979780408 1244.5887099358602 25.267 2 -1.1599943625641957 0.3617776658693189 1.0 ['ENST00000395879.5_2_7:43679254-43680238:-|nuORF'] 135761 3497 WMCLAAAL True PC9_epitope_Rep4 877.4190166396498 877.41790993586 19.526 2 -1.1599957369060725 0.3617811461375768 1.0 ['ENST00000524501.1_1_11:89867926-89868807:+|nuORF', 'NAALAD2|p.N202Ifs*8|1|0.56|ENSG00000077616|chr11:90150601-90150601|A/-|frameshift_variant', 'nc|ENSG00000077616|Q9Y3Q0-2|NAALAD2', 'ENSG00000077616|ENST00000534061|NAALAD2'] 123851 12068 VGRPPLPVP True PC9_epitope_Rep2 930.5650866263799 930.56398993586 51.733 2 -1.1600052705107158 0.3617811461375768 1.0 ['ENSG00000181192|ENST00000263035|DHTKD1'] 86778 14365 QLLRRRAEQ True PC9_epitope_Rep1 1168.678887592 1168.6777899358601 60.079 2 -1.1601667987612965 0.36183953772361616 1.0 ['ENST00000375078.3_1_1:20810205-20811795:-|nuORF'] 5354 18073 ALRRRPWNNR True NCI_RA007_Epitope_Rep2 1337.7541182209297 1337.75302993586 75.053 2 -1.1602194632404002 0.3618430163026374 1.0 ['nc|ENSG00000162746|Q6BAA4-5|FCRLB', 'nc|ENSG00000162746|Q6BAA4-4|FCRLB'] 57775 11025 LEEQRGAL True PC9_epitope_Rep2 914.4821448480599 914.48104993586 47.727 2 -1.1602265649324284 0.3618430163026374 1.0 ['ENSG00000165633|ENST00000332853|VSTM4', 'nc|ENSG00000165633|Q8IW00-2|VSTM4'] 19675 10155 ELRFKQYLRNP True H1975_Epitope_Rep1 1462.8044820279397 1462.80283490379 44.0 3 -1.1602364802241047 0.3618510499018077 1.0 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 102797 2998 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 16.224 2 -1.1603151030272467 0.3618590832987147 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 83690 21488 PVFFSHRF True H1975_Epitope_Rep1 1035.5290354708297 1035.5279299358601 89.297 2 -1.1603263031446673 0.3618671164933659 1.0 ['ENST00000466482.5_1_3:98489996-98501720:+|nuORF', 'ENST00000495376.5_1_3:98489996-98502446:+|nuORF', 'ENST00000476833.5_1_3:98489996-98501153:+|nuORF'] 27954 4947 FQERNREHERH True NCI_RA007_Epitope_Rep2 1536.7294195947197 1536.72778490379 23.863 3 -1.1603588239278821 0.3618831822759315 1.0 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7', 'ENST00000537641.5_1_11:61178417-61183276:-|nuORF'] 74030 8623 NDISHRLR True H1975_Epitope_Rep3 1009.5417254128499 1009.54062993586 38.162 2 -1.160362782358552 0.3618831822759315 1.0 ['ENSG00000187135|ENST00000335523|VSTM2B'] 15886 12841 EDIRKDKKEYT True NCI_RA007_Epitope_Rep1 1423.7307079509899 1423.72960993586 53.939 2 -1.1605236836114259 0.36192442284937437 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.M2050Ifs*24|1|0.12|ENSG00000163092|chr2:167248067-167248067|G/-|frameshift_variant', 'XIRP2|p.R1098Ffs*7|1|0.04|ENSG00000163092|chr2:167245207-167245222|TAAGAAAGGGGTGCTT/-|frameshift_variant', 'XIRP2|p.A1392Lfs*11|1|0.36|ENSG00000163092|chr2:167246090-167246090|G/-|frameshift_variant', 'XIRP2|p.G1535Vfs*41|1|0.22|ENSG00000163092|chr2:167246520-167246520|G/-|frameshift_variant', 'XIRP2|p.R1900Efs*5|1|0.1|ENSG00000163092|chr2:167247612-167247612|C/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 26654 4918 FIQQCQFFFYN True NCI_RA007_Epitope_Rep1 1483.65945758703 1483.65781490379 23.211 3 -1.160539324772104 0.36192442284937437 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55005616-55005874:+|nuORF'] 113618 22920 TLVRLRKLKF True PC9_epitope_Rep1 1272.8394109846797 1272.83776490379 92.96 3 -1.1605584954083752 0.36194396193640965 1.0 ['ENST00000466781.5_1_22:26864510-26877728:-|nuORF', 'ENST00000496385.5_1_22:26862186-26875401:-|nuORF', 'nc|ENSG00000100099|Q9NQG7-2|HPS4', 'nc|ENSG00000100099|Q9NQG7-3|HPS4', 'ENSG00000100099|ENST00000398145|HPS4', 'nc|ENSG00000100099|Q9NQG7-4|HPS4', 'ENST00000481910.1_1_22:26872952-26875347:-|nuORF'] 19318 15446 ELKSKVLIMK True PC9_epitope_Rep1 1187.7311659753098 1187.73006993586 64.233 2 -1.1605818759656137 0.36194396193640965 1.0 ['ENSG00000174799|ENST00000257287|CEP135'] 89678 7010 QYWSQFHSVRP True NCI_RA007_Epitope_Rep5 1433.6840325420899 1433.68237490379 33.643 3 -1.160585076828156 0.36194396193640965 1.0 ['ENST00000542376.5_1_11:63999367-64000338:+|nuORF', 'ENST00000537109.1_1_11:63999814-64000338:+|nuORF', 'ENST00000543791.5_1_11:63999367-64000338:+|nuORF', 'ENSG00000110011|ENST00000628077|DNAJC4'] 8707 14863 AVAQFKKY True PC9_epitope_Rep1 953.5334521449299 953.53234993586 61.99 2 -1.1606346027533156 0.36194396193640965 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 127427 12825 VNFTQEEWSLL True NCI_RA007_Epitope_Rep2 1364.6612314088397 1364.6601299358601 54.503 2 -1.1606733829964646 0.36197608558842037 1.0 ['ZNF844|p.G165Kfs*17|1|0.17|ENSG00000223547|chr19:12075613-12075634|GGAGAAAAACTCTATGATTGTA/-|frameshift_variant', 'ENSG00000223547|ENST00000439326|ZNF844'] 6555 16003 APVAAAALA True NCI_RA007_Epitope_Rep2 753.43848913093 753.43738993586 66.965 2 -1.160782442814607 0.36197608558842037 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 96562 8553 SAESIKLEREY True H1975_Epitope_Rep3 1323.66704506527 1323.66594993586 37.887 2 -1.1607961509606457 0.36197608558842037 1.0 ['ENSG00000163633|ENST00000295898|C4orf36'] 57549 11109 LEDRKYLP True PC9_epitope_Rep6 1032.56039516876 1032.55928993586 53.666 2 -1.1608125623055066 0.36197608558842037 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000479983.1_1_1:62958359-62960107:-|nuORF'] 102132 12175 SLRPLLMLA True H1975_Epitope_Rep1 1012.61032256664 1012.60922993586 51.85 2 -1.1609985140942765 0.36206310649062967 1.0 ['CON__Q3ZBS7'] 32058 13118 GERYWRYSEER True H1975_Epitope_Rep3 1529.7011391582098 1529.70004993586 55.704 2 -1.1609986135294625 0.36206310649062967 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 134939 16255 WADRTARVI True PC9_epitope_Rep4 1086.59342663254 1086.59232993586 70.476 2 -1.1610056757514648 0.36206310649062967 1.0 ['nc|ENSG00000146166|Q5TDP6-2|LGSN', 'ENSG00000146166|ENST00000370657|LGSN'] 33466 13404 GLARYRLI True PC9_epitope_Rep5 960.5868847001199 960.58578993586 56.575 2 -1.161038092206362 0.36207916430684034 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 94847 24372 RSTNIKKA True H1975_Epitope_Rep1 916.5454138109599 916.54430993586 101.06 2 -1.1610813687175068 0.36207916430684034 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 136199 16864 WRRWCWRWPWR True PC9_epitope_Rep5 1772.8735221609597 1772.87242993586 69.877 2 -1.1611271546396393 0.36209522131467337 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 72577 24541 MLQIHILLL True PC9_epitope_Rep4 1092.6729228232 1092.6718299358602 102.88 2 -1.1611818725165477 0.36209522131467337 1.0 ['ENST00000264161.8_1_2:136664580-136664616:-|nuORF'] 73808 9394 NAIIIYQTHK True NCI_RA007_Epitope_Rep1 1199.6662572196299 1199.6651699358601 40.533 2 -1.1612700603348527 0.3621410053109819 1.0 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 141781 14720 YVCGISSK True H1975_Epitope_Rep3 855.41603943419 855.41549496793 61.995 1 -1.1613293272544791 0.3621650872755188 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS', 'KPNA1-GMPS|1|fusion', 'GMPS|p.Y526C|1|0.36|ENSG00000163655|chr3:155931781-155931781|A/G|missense_variant'] 27591 10577 FNNSEYHL True PC9_epitope_Rep3 1022.4457593393402 1022.4446699358599 45.631 2 -1.161335889931624 0.3621650872755188 1.0 ['ENSG00000090402|ENST00000264382|SI'] 130017 11283 VSAKTERAL True PC9_epitope_Rep1 973.5556441414899 973.55454993586 48.279 2 -1.161340901941047 0.3621650872755188 1.0 ['ENST00000361246.6_1_14:103399940-103400018:-|nuORF'] 110311 19809 TESVKDIVP True PC9_epitope_Rep3 986.5284263341398 986.5273299358599 81.429 2 -1.16136328569 0.36217311419294757 1.0 ['NUP153|p.N49D|1|0.1|ENSG00000124789|chr6:17688585-17688585|T/C|missense_variant'] 80145 27035 PFRHLLLLLQ True PC9_epitope_Rep1 1248.7706627185198 1248.76956993586 110.22 2 -1.1614492000947272 0.36217331672391884 1.0 ['CD4|p.V13L|1|0.13|ENSG00000010610|chr12:6800175-6800175|G/T|missense_variant'] 31225 9393 GCSHGPRG True NCI_RA007_Epitope_Rep2 769.32895576529 769.32840496793 41.145 1 -1.1614524102949084 0.36217331672391884 1.0 ['ENST00000564946.5_1_16:30663032-30664184:+|nuORF', 'ENST00000565410.5_1_16:30662428-30664184:+|nuORF', 'ENST00000563399.5_1_16:30662065-30664184:+|nuORF', 'ENST00000300835.8_2_16:30662428-30664408:+|nuORF', 'ENST00000568754.5_2_16:30662065-30664408:+|nuORF'] 113340 12240 TLRQWIYYFPK True H1975_Epitope_Rep1 1513.80817042605 1513.80706993586 52.103 2 -1.1615133676086677 0.36217331672391884 1.0 ['nc|ENSG00000095110|Q8N323-2|NXPE1', 'ENSG00000095110|ENST00000534921|NXPE1'] 132662 21027 VVGAPRGR True PC9_epitope_Rep6 810.4824196315799 810.48132993586 93.703 2 -1.1615491751957392 0.36217331672391884 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF'] 94790 19924 RSPEKQLHP True H1975_Epitope_Rep2 1090.5883412521 1090.5872499358602 82.621 2 -1.16154917546751 0.36217331672391884 1.0 ['nc|ENSG00000063015|Q53EL9-2|SEZ6', 'nc|ENSG00000063015|Q53EL9-3|SEZ6', 'ENSG00000063015|ENST00000317338|SEZ6'] 22686 10261 ETQRDQERRIR True NCI_RA007_Epitope_Rep2 1485.7760354339696 1485.7749299358602 44.505 2 -1.1615890433888483 0.36217331672391884 1.0 ['ENST00000575300.1_1_16:4312060-4322792:-|nuORF', 'ENSG00000090447|ENST00000204517|TFAP4'] 20325 19231 ENVKEEMIQ True PC9_epitope_Rep1 1118.52777471114 1118.5266699358601 78.772 2 -1.161590908749678 0.36217331672391884 1.0 ['TMPRSS15|p.L140M|1|0.17|ENSG00000154646|chr21:18383705-18383705|G/T|missense_variant'] 32608 24251 GGHVRYLPRKA True PC9_epitope_Rep1 1252.7152731007197 1252.7141699358601 98.101 2 -1.1616127856783904 0.36217331672391884 1.0 ['EPHA5|p.Q418Kfs*4|1|0.27|ENSG00000145242|chr4:65490528-65490528|C/-|frameshift_variant'] 119229 14783 VALAFERGI True PC9_epitope_Rep4 974.5549158654999 974.55380993586 64.795 2 -1.1616151563392538 0.36217331672391884 1.0 ['IRGC|p.R359L|1|0.34|ENSG00000124449|chr19:43719634-43719634|G/T|missense_variant'] 87093 8476 QNPQQATPAP True PC9_epitope_Rep3 1050.50942222506 1050.50832993586 37.564 2 -1.1616154810585646 0.36217331672391884 1.0 ['ENSG00000161021|ENST00000292599|MAML1'] 3559 5127 AGLVIPPEK True NCI_RA007_Epitope_Rep5 922.5487678559 922.54766993586 26.417 2 -1.1616244981258026 0.36217331672391884 1.0 ['ENST00000425159.7_1_17:45567593-45569825:-|nuORF', 'nc|ENSG00000278845|Q9BRJ2|MRPL45', 'ENSG00000278845|ENST00000613675|MRPL45'] 121284 18708 VETLTIRR True NCI_RA007_Epitope_Rep1 986.58727862294 986.58618993586 76.91 2 -1.1617263942101257 0.3622019502988361 1.0 ['ENSG00000137462|ENST00000642700|TLR2'] 82640 23314 PQLARTKGG True PC9_epitope_Rep5 926.52976374682 926.5292149679301 94.656 1 -1.1617281472752323 0.3622019502988361 1.0 ['nc|ENSG00000172830|Q8TE77-3|SSH3', 'ENSG00000172830|ENST00000308127|SSH3', 'nc|ENSG00000172830|Q8TE77-4|SSH3'] 79328 14821 PARLLATRPC True NCI_RA007_Epitope_Rep4 1096.6175332054 1096.6164299358602 64.471 2 -1.1617590947787488 0.36220997533846694 1.0 ['ENSG00000214357|ENST00000369800|NEURL1B', 'nc|ENSG00000214357|A8MQ27-3|NEURL1B'] 118605 17691 TYSCDPAPGPD True H1975_Epitope_Rep2 1121.4335399731299 1121.43297496793 73.369 1 -1.1618275882433875 0.3622305824326535 1.0 ['nc|ENSG00000117335|P15529-2|CD46', 'nc|ENSG00000117335|P15529-4|CD46', 'nc|ENSG00000117335|P15529|CD46', 'nc|ENSG00000117335|P15529-10|CD46', 'nc|ENSG00000117335|P15529-5|CD46', 'nc|ENSG00000117335|P15529-3|CD46', 'nc|ENSG00000117335|P15529-13|CD46', 'ENSG00000117335|ENST00000367042|CD46', 'nc|ENSG00000117335|P15529-6|CD46', 'nc|ENSG00000117335|P15529-8|CD46', 'nc|ENSG00000117335|P15529-14|CD46', 'nc|ENSG00000117335|P15529-12|CD46', 'nc|ENSG00000117335|P15529-7|CD46', 'nc|ENSG00000117335|P15529-9|CD46', 'nc|ENSG00000117335|P15529-15|CD46', 'nc|ENSG00000117335|P15529-16|CD46', 'CD46|p.G243Efs*55|1|0.21|ENSG00000117335|chr1:207767066-207767066|G/-|frameshift_variant', 'ENST00000469535.5_1_1:207934598-207940656:+|nuORF'] 133377 25590 VVVGVGLIVG True PC9_epitope_Rep3 910.5851533646199 910.5846049679301 103.92 1 -1.1618881734343809 0.36226723704076497 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 67085 6132 LSQESPRTP True H1975_Epitope_Rep3 1013.5141732523299 1013.51306993586 28.599 2 -1.1619004581094219 0.36226723704076497 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 85615 26733 QGKAGGPA True NCI_RA007_Epitope_Rep5 684.3554877829599 684.35493496793 110.55 1 -1.161907160673899 0.36226723704076497 1.0 ['nc|ENSG00000173349|Q587I9|SFT2D3'] 41712 19014 IAKNIYII True PC9_epitope_Rep3 946.5851533646198 946.58404993586 78.359 2 -1.1619690170687205 0.3622913075752048 1.0 ['ENST00000374884.2_2_X:62570747-62571134:-|nuORF'] 19600 14118 ELQMKKKGF True PC9_epitope_Rep6 1107.6110508426298 1107.6099499358602 66.174 2 -1.1619708823605608 0.3622913075752048 1.0 ['CYBB|p.Y425*|1|0.29|ENSG00000165168|chrX:37805129-37805129|C/-|frameshift_variant', 'ENSG00000165168|ENST00000378588|CYBB'] 63145 12805 LLRLGGIG True PC9_epitope_Rep2 797.5123227775299 797.51122993586 54.556 2 -1.161997246120788 0.3622913075752048 1.0 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF'] 128238 9169 VPNRVLAP True PC9_epitope_Rep6 864.5181364339599 864.51702993586 45.396 2 -1.162028454194201 0.36229933068290476 1.0 ['SPANXN3|p.K59Rfs*5|1|0.66|ENSG00000189252|chrX:143509067-143509067|C/-|frameshift_variant', 'ENSG00000189252|ENST00000370503|SPANXN3'] 83393 12910 PTIVEREP True PC9_epitope_Rep1 939.5025459394699 939.50144993586 54.531 2 -1.1621096284859083 0.36231993457885137 1.0 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 23286 10954 EVQALVRKIDA True H1975_Epitope_Rep3 1240.71393568804 1240.71282993586 47.223 2 -1.1621677287035088 0.36234053795636967 1.0 ['nc|ENSG00000188487|Q1MX18-6|INSC', 'nc|ENSG00000188487|Q1MX18-4|INSC', 'ENSG00000188487|ENST00000379556|INSC', 'nc|ENSG00000188487|Q1MX18|INSC'] 2906 18928 AEWRRRRR True NCI_RA007_Epitope_Rep5 1184.6751396242398 1184.6745749679299 79.645 1 -1.1621976733454762 0.3623737214890485 1.0 ['ENST00000554273.1_1_14:50998776-50999365:-|nuORF'] 15936 6783 EDLVSFHHRK True H1975_Epitope_Rep1 1266.64691875738 1266.64582993586 31.134 2 -1.1622768417929885 0.3624069041867955 1.0 ['nc|ENSG00000165521|Q05BV3|EML5', 'ENSG00000165521|ENST00000554922|EML5', 'ENST00000553281.5_1_14:89088194-89171927:-|nuORF', 'nc|ENSG00000165521|Q05BV3-2|EML5', 'EML5|p.E1680Rfs*7|1|0.14|ENSG00000165521|chr14:88621254-88621255|-/C|frameshift_variant'] 43509 7213 IGLYEPELG True H1975_Epitope_Rep3 989.5069626135698 989.50586993586 32.716 2 -1.1623703874330285 0.3624355264813184 1.0 ['nc|ENSG00000186998|Q96A84-2|EMID1', 'nc|ENSG00000186998|Q96A84|EMID1', 'ENSG00000186998|ENST00000334018|EMID1'] 111757 17529 TIIMNKVV True PC9_epitope_Rep2 916.54157430048 916.54046993586 72.69 2 -1.162374728711426 0.3624355264813184 1.0 ['OR13C4|p.P133T|1|0.17|ENSG00000148136|chr9:104526813-104526813|G/T|missense_variant'] 22129 5370 ESRFTLLLMP True NCI_RA007_Epitope_Rep2 1205.6478302741698 1205.64619490379 25.506 3 -1.1623952185220818 0.36243898757107634 1.0 ['ENST00000173527.5_1_5:128442675-128442732:+|nuORF'] 56830 13913 LDNSIITKRMY True NCI_RA007_Epitope_Rep1 1352.71222143588 1352.71112993586 58.141 2 -1.1624008812812363 0.36243898757107634 1.0 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'SP110|p.Q231Kfs*2|1|0.11|ENSG00000135899|chr2:230211530-230211530|G/-|frameshift_variant'] 100899 15986 SLEVHLSTHTV True PC9_epitope_Rep1 1221.63535101417 1221.63424993586 66.299 2 -1.1624368049485299 0.3624550280524316 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384'] 57861 9722 LEFDIGWLA True H1975_Epitope_Rep1 1062.53859709502 1062.53750993586 42.323 2 -1.1624412466124958 0.3624550280524316 1.0 ['ENSG00000133116|ENST00000380099|KL', 'KL|p.L785Sfs*7|1|0.41|ENSG00000133116|chr13:33061427-33061428|-/T|frameshift_variant'] 141105 6206 YSQMHSWAFHF True NCI_RA007_Epitope_Rep3 1439.6080907205098 1439.6069899358602 31.417 2 -1.1625009722277884 0.36246194872826987 1.0 ['nc|ENSG00000149488|Q8TDI7-3|TMC2'] 38189 22531 HDRRPLLH True PC9_epitope_Rep6 1042.57844527474 1042.5773499358602 99.677 2 -1.1625048209970856 0.36246194872826987 1.0 ['ENST00000231706.5_1_3:170204113-170216543:-|nuORF'] 36460 16974 GVGFWFNF True NCI_RA007_Epitope_Rep3 972.4493881677998 972.4488349679301 74.631 1 -1.1625286501522556 0.36246194872826987 1.0 ['ENST00000358127.8_1_9:36833483-36833678:-|nuORF'] 32508 8974 GGETAETPETP True PC9_epitope_Rep5 1087.46694827639 1087.4658499358602 39.462 2 -1.1625398636286643 0.36246194872826987 1.0 ['ENST00000526623.2_1_11:64948241-64949272:-|nuORF'] 45298 12062 IPWYQSMFNWN True H1975_Epitope_Rep3 1484.6547065597597 1484.65360993586 51.558 2 -1.1625509212948173 0.3624699681757003 1.0 ['nc|ENSG807|P61550|ERVS71-1'] 128594 20649 VPTQPLLKAHP True PC9_epitope_Rep2 1199.70264272835 1199.7015499358602 84.863 2 -1.162594394700249 0.3624734280071949 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 101375 6706 SLKASFCYVEH True NCI_RA007_Epitope_Rep2 1282.6016083577401 1282.59997490379 30.697 3 -1.1625971647361146 0.3624734280071949 1.0 ['ENST00000225171.6_1_10:69597845-69597905:-|nuORF'] 82731 12725 PRFFSMAENRN True NCI_RA007_Epitope_Rep2 1367.6404534779497 1367.63934993586 54.115 2 -1.16281598428192 0.3625066036074564 1.0 ['TTC21B|p.K1014N|1|0.09|ENSG00000123607|chr2:165890897-165890897|T/A|missense_variant'] 19333 8338 ELLDLHRDSER True H1975_Epitope_Rep1 1381.6949911486101 1381.6938899358602 37.003 2 -1.1628876071851473 0.36251462208973245 1.0 ['ENSG00000117228|ENST00000370473|GBP1', 'ENSG00000162645|ENST00000370466|GBP2'] 109436 7652 TDIDSDDHQVM True H1975_Epitope_Rep3 1274.50849581854 1274.5073899358601 34.415 2 -1.162898997903541 0.36252264037029586 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'ENST00000509802.1_1_4:79369241-79371543:+|nuORF'] 46289 9555 ISPVENSK True H1975_Epitope_Rep3 872.46034677432 872.45924993586 41.761 2 -1.1630263811807422 0.3625935475756242 1.0 ['EPAS1|p.G792V|1|0.06|ENSG00000116016|chr2:46382512-46382512|G/T|missense_variant'] 37384 4932 GVSPCWPGWSR True NCI_RA007_Epitope_Rep1 1230.5604122521 1230.55876490379 23.267 3 -1.1630538841189195 0.3626004603252462 1.0 ['ENST00000397269.7_1_10:5966442-5967372:+|nuORF', 'ENST00000503699.1_1_4:331733-352211:+|nuORF', 'nc|ENSG00000292363|Q9HC73-2|CRLF2'] 140124 13058 YQQILHRNLVY True H1975_Epitope_Rep3 1445.77793292693 1445.7768299358602 55.467 2 -1.1631435962591 0.3626004603252462 1.0 ['nc|ENSG00000184402|O75177-2|SS18L1', 'ENSG00000184402|ENST00000331758|SS18L1', 'nc|ENSG00000184402|O75177-5|SS18L1'] 28680 8087 FSPFCLQE True NCI_RA007_Epitope_Rep1 969.42660411789 969.42550993586 35.454 2 -1.1631756747861306 0.3626004603252462 1.0 ['ENST00000341567.8_1_7:66420943-66421105:+|nuORF'] 124062 8948 VGSKRDHLL True PC9_epitope_Rep5 1023.58252759567 1023.58142993586 39.361 2 -1.1631789063611409 0.3626004603252462 1.0 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 48764 5469 KDKNYAGK True NCI_RA007_Epitope_Rep2 922.4872302284998 922.48612993586 25.892 2 -1.1632003755271678 0.36261193279001913 1.0 ['ENST00000464350.6_1_3:66406477-66420969:+|nuORF', 'ENST00000483224.5_1_3:66354939-66420969:+|nuORF', 'SLC25A26|p.A187Ffs*31|1|0.1|ENSG00000144741|chr3:66362918-66362919|GA/-|frameshift_variant'] 80959 13006 PIFHRTMQTWW True NCI_RA007_Epitope_Rep3 1501.7288745595297 1501.7277699358601 58.43 2 -1.1632037512134061 0.36261193279001913 1.0 ['ENST00000469172.5_1_10:70091245-70091596:+|nuORF'] 93969 23991 RRIEIRILILP True PC9_epitope_Rep5 1390.9136385540999 1390.9125499358602 97.264 2 -1.1632176925413789 0.36261193279001913 1.0 ['PSG7|p.N292I|1|0.13|ENSG00000221878|chr19:42926551-42926551|T/A|missense_variant'] 25348 11623 FDYREEFIYWI True PC9_epitope_Rep1 1579.7347307022699 1579.7330849037899 49.586 3 -1.1633107200432187 0.3626485568760611 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 142391 12476 YYELWWFWLLW True PC9_epitope_Rep1 1703.8176724805896 1703.81602490379 52.856 3 -1.1633175451518738 0.3626485568760611 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 112463 5375 TLDGYGIHPK True NCI_RA007_Epitope_Rep2 1099.56620882519 1099.5651099358602 25.527 2 -1.1633240623639072 0.3626485568760611 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 135300 9219 WFWQDRFWLPP True PC9_epitope_Rep1 1576.7615545867998 1576.7599049037901 40.313 3 -1.1633574780242761 0.3626554659892604 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 58473 11972 LEPYGTGLR True PC9_epitope_Rep2 1004.5290950404799 1004.52798993586 51.369 2 -1.1634574648032217 0.3626554659892604 1.0 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000590400.1_1_19:11303345-11305238:-|nuORF'] 6576 6287 APVGPRAAMS True PC9_epitope_Rep1 955.49093570995 955.48982993586 28.996 2 -1.1634597376022047 0.3626554659892604 1.0 ['ENSG00000185133|ENST00000331075|INPP5J'] 125887 9535 VLARMVDI True NCI_RA007_Epitope_Rep4 915.5211732090698 915.52006993586 43.527 2 -1.1634677358239203 0.3626554659892604 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3190651-3210559:+|nuORF'] 10196 10764 AYYRIYRRWHT True NCI_RA007_Epitope_Rep2 1583.8109643907098 1583.8098699358602 46.47 2 -1.1635399196529719 0.36268296363362 1.0 ['MTNR1B|p.H149Y|1|0.22|ENSG00000134640|chr11:92981668-92981668|C/T|missense_variant'] 105550 24600 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 106.4 2 -1.1635755223702782 0.36268296363362 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 55472 10470 LAGASPTP True H1975_Epitope_Rep1 712.3755545212 712.3750049679301 45.229 1 -1.1635761213787905 0.36268296363362 1.0 ['ENST00000436881.2_1_9:139742177-139742615:+|nuORF'] 68278 7631 LTEEEAKHC True NCI_RA007_Epitope_Rep1 1058.47025983502 1058.46916993586 33.677 2 -1.1635839293976278 0.36268296363362 1.0 ['ENSG00000039537|ENST00000337836|C6'] 46843 12492 ITIKYSREP True PC9_epitope_Rep1 1105.61315901761 1105.61206993586 52.918 2 -1.1635860886723077 0.36268296363362 1.0 ['nc|ENSG00000286135|A0A494C103|SPADH'] 12718 4474 DLEAYIYVFSQ True NCI_RA007_Epitope_Rep2 1346.6394333351 1346.6383299358602 22.036 2 -1.1636551204256813 0.36268420258512296 1.0 ['ENSG00000172031|ENST00000370383|EPHX4'] 28616 8515 FSHSVADLP True PC9_epitope_Rep2 971.4712458111899 971.47014993586 38.116 2 -1.1636643715011472 0.36268420258512296 1.0 ['ADAMTSL1|p.Q557H|1|0.48|ENSG00000178031|chr9:18706843-18706843|G/T|missense_variant'] 78104 7484 NWAAEFAEL True PC9_epitope_Rep4 1049.48181049489 1049.4807099358602 36.148 2 -1.1636907970627295 0.36268420258512296 1.0 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'nc|ENSG00000127946|O00291-4|HIP1'] 126703 13335 VLPFVFMG True PC9_epitope_Rep6 908.4829967951999 908.48188993586 62.952 2 -1.1637374113501584 0.36268420258512296 1.0 ['ENST00000216297.6_1_14:21820582-21820828:-|nuORF'] 119547 11777 VASRGWRQAA True PC9_epitope_Rep1 1100.5839245779998 1100.5828299358602 50.172 2 -1.1637452254135272 0.36268420258512296 1.0 ['ENST00000506402.5_1_4:515617-515826:+|nuORF'] 119575 8008 VATHAGLYRKP True NCI_RA007_Epitope_Rep2 1211.6774906096698 1211.67638993586 35.779 2 -1.1637625745825364 0.36268420258512296 1.0 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000593706.3_1_19:50365412-50367307:-|nuORF', 'ENST00000594661.5_1_19:50364507-50367546:-|nuORF'] 56835 6846 LDPACAADPWE True H1975_Epitope_Rep3 1186.49647458286 1186.49536993586 31.291 2 -1.163768355356867 0.36268420258512296 1.0 ['nc|ENSG00000185186|P59037|LINC00313'] 58369 6241 LENKYYVK True NCI_RA007_Epitope_Rep5 1055.56514619603 1055.56404993586 30.682 2 -1.1637796299573377 0.36268420258512296 1.0 ['BRDT|p.A89V|1|0.34|ENSG00000137948|chr1:91964700-91964700|C/T|missense_variant'] 60839 10443 LHVEVEPSV True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 46.8 2 -1.1638101614888146 0.36269221580978966 1.0 ['nc|ENSG00000167632|Q96Q05-3|TRAPPC9', 'ENSG00000167632|ENST00000438773|TRAPPC9', 'nc|ENSG00000167632|Q96Q05-2|TRAPPC9', 'TRAPPC9-KCNK9|1|fusion', 'TRAPPC9-KCNK9|2|fusion', 'ENST00000521667.5_1_8:140743306-141301208:-|nuORF', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 44748 18637 ILYKFCRD True PC9_epitope_Rep4 1056.54263692964 1056.5415299358601 79.765 2 -1.1638944874694133 0.36273794855030556 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7'] 58021 8092 LEHPQRRP True H1975_Epitope_Rep3 1031.5624608574299 1031.56136993586 36.1 2 -1.1639321058869068 0.36274140012070005 1.0 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66613305-66613563:+|nuORF'] 136938 11128 YAGLRLAEVPD True H1975_Epitope_Rep1 1202.62953735774 1202.62844993586 47.77 2 -1.1639397453233071 0.36274140012070005 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3', 'ENST00000548709.1_1_12:56490921-56492754:+|nuORF'] 126735 24909 VLPGKKKKKT True NCI_RA007_Epitope_Rep2 1125.75976368165 1125.75811490379 104.73 3 -1.163967891644563 0.3627437422209929 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 112725 15000 TLGTLQPPD True PC9_epitope_Rep2 940.48656152216 940.48601496793 62.953 1 -1.1639808973915864 0.3627437422209929 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 44390 9174 ILFFSRMSTL True NCI_RA007_Epitope_Rep2 1213.6529156546098 1213.65180993586 40.293 2 -1.1639825991509207 0.3627437422209929 1.0 ['ENST00000473723.5_1_7:48034024-48035656:-|nuORF'] 123042 5802 VGIVKLYKVLK True PC9_epitope_Rep1 1258.83767964918 1258.83658993586 27.133 2 -1.163994359671719 0.3627437422209929 1.0 ['NLRP14|p.E1029V|1|0.61|ENSG00000158077|chr11:7070396-7070396|A/T|missense_variant'] 93647 9389 RQRFRRFHYQE True H1975_Epitope_Rep3 1621.8338250936101 1621.83217490379 41.115 3 -1.164017137285579 0.3627437422209929 1.0 ['nc|ENSG00000140265|Q8IWY8-4|ZSCAN29', 'ENSG00000140265|ENST00000684362|ZSCAN29', 'nc|ENSG00000140265|Q8IWY8-3|ZSCAN29'] 67197 12588 LSRDPLLL True PC9_epitope_Rep5 925.55966689277 925.55856993586 53.419 2 -1.1640967800558502 0.36276432576500467 1.0 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 53609 22596 KRRVRRSKK True PC9_epitope_Rep4 1212.8003401373596 1212.7987049037902 95.147 3 -1.1642309148210006 0.36280549130041234 1.0 ['NBPF14|p.G2884V|1|0.5|ENSG00000270629|chr1:148533933-148533933|C/A|missense_variant'] 12701 8135 DLDYTLWPFWV True H1975_Epitope_Rep1 1453.69180326113 1453.69070993586 36.229 2 -1.1643033789203516 0.36280549130041234 1.0 ['ENST00000532742.5_1_14:24684941-24685236:-|nuORF', 'nc|ENSG00000213920|Q86V88-3|MDP1', 'nc|ENSG00000213920|Q86V88-2|MDP1', 'ENST00000528804.1_1_14:24683633-24685170:-|nuORF', 'ENSG00000213920|ENST00000288087|MDP1'] 42500 22190 IEEIRPSSV True PC9_epitope_Rep1 1028.5502244078798 1028.54912993586 90.174 2 -1.1643993992418535 0.36285121629266454 1.0 ['nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 20395 10565 EPANPRLGLP True PC9_epitope_Rep1 1062.5821932425 1062.58108993586 45.529 2 -1.1645204208524313 0.36291528917828364 1.0 ['ENSG00000253304|ENST00000521452|TMEM200B'] 37604 10721 GVVREWMGF True PC9_epitope_Rep2 1079.5222358382298 1079.52112993586 46.554 2 -1.1646000152285072 0.36291528917828364 1.0 ['ENST00000356641.7_2_11:120356335-120356476:+|nuORF'] 27325 6174 FLSAEISEP True PC9_epitope_Rep2 991.48622716899 991.48512993586 29.139 2 -1.1646085710061629 0.36291528917828364 1.0 ['ENST00000234677.6_1_1:109780506-109780617:+|nuORF'] 49865 26762 KIELCISYHAN True NCI_RA007_Epitope_Rep3 1289.64380752289 1289.64217490379 117.02 3 -1.1646237622875164 0.36291528917828364 1.0 ['PPP1R3C|p.F234L|1|0.25|ENSG00000119938|chr10:91630181-91630181|A/G|missense_variant'] 32441 21401 GFVHRIPP True PC9_epitope_Rep1 921.5184707871299 921.51736993586 87.154 2 -1.1646320234696408 0.36291528917828364 1.0 ['ENSG00000105198|ENST00000221797|LGALS13'] 13068 11673 DLPLSQDPAP True H1975_Epitope_Rep3 1051.51858992643 1051.51748993586 50.037 2 -1.1646474962488198 0.36291528917828364 1.0 ['ENST00000572418.1_1_17:3806502-3807261:-|nuORF'] 60853 15395 LHVPSGKLS True PC9_epitope_Rep1 936.53926580136 936.53816993586 64.035 2 -1.1646810687699898 0.36291528917828364 1.0 ['ZFPM2|p.P392S|1|0.48|ENSG00000169946|chr8:105801256-105801256|C/T|missense_variant'] 13538 5334 DNVTIFCNIF True H1975_Epitope_Rep3 1184.55359553616 1184.5524899358602 25.589 2 -1.1647029005099403 0.36291528917828364 1.0 ['ENSG00000188211|ENST00000338965|NCR3LG1'] 9494 16752 AVVRLPWRNRK True NCI_RA007_Epitope_Rep1 1393.8418705961697 1393.8407699358602 69.286 2 -1.1647161853151091 0.36292329738290974 1.0 ['ENST00000484991.1_1_12:111890502-111891686:-|nuORF'] 22700 8090 ETRKKQYRWME True H1975_Epitope_Rep3 1553.7772813039298 1553.7756449037902 36.092 3 -1.1647793463743983 0.3629473207888684 1.0 ['ALOX5|p.Q140K|1|0.25|ENSG00000012779|chr10:45395923-45395923|C/A|missense_variant'] 9379 10996 AVSLEWMSLWF True NCI_RA007_Epitope_Rep4 1367.65839495787 1367.65728993586 49.163 2 -1.1647877552341337 0.3629473207888684 1.0 ['RTTN|p.G1342V|1|0.45|ENSG00000176225|chr18:70092683-70092683|C/A|missense_variant'] 103918 11273 SQALLFIKRMY True NCI_RA007_Epitope_Rep2 1368.75877770548 1368.75768993586 48.436 2 -1.164793244902151 0.3629473207888684 1.0 ['ENSG00000125755|ENST00000245934|SYMPK'] 64194 11131 LPGIHVSA True PC9_epitope_Rep5 792.4493881678 792.44828993586 47.8 2 -1.1648441539877727 0.3629678976344302 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 22595 7166 ETLLAPLSPRC True H1975_Epitope_Rep1 1198.63799386646 1198.6368899358602 32.585 2 -1.164899992223438 0.3629736693269654 1.0 ['ENST00000262713.6_1_14:23451416-23451767:-|nuORF'] 15978 10666 EDRERRYRERK True H1975_Epitope_Rep3 1591.8291336359896 1591.82802993586 46.101 2 -1.1649328329162711 0.3629736693269654 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 63796 10502 LNGHRRRLT True H1975_Epitope_Rep3 1121.6530071973298 1121.6519099358602 45.46 2 -1.1649521532881502 0.3629736693269654 1.0 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1'] 129424 5411 VRGESPAVLP True H1975_Epitope_Rep3 1023.5712942056298 1023.57018993586 25.875 2 -1.1649893097152348 0.3629736693269654 1.0 ['ENST00000466772.5_1_22:21065465-21081626:-|nuORF'] 29381 8817 FVDPGVAG True H1975_Epitope_Rep3 760.3755545211999 760.3750049679301 38.921 1 -1.1650420492058637 0.3629736693269654 1.0 ['nc|ENSG00000126775|Q6ZNE5-2|ATG14', 'ENSG00000126775|ENST00000247178|ATG14'] 58148 20709 LEKQKKEL True PC9_epitope_Rep1 1014.6073453611798 1014.60624993586 84.483 2 -1.1650524887269322 0.3629736693269654 1.0 ['ENST00000539855.5_1_11:95532492-95564417:+|nuORF', 'nc|ENSG00000166037|Q86XR8-2|CEP57', 'nc|ENSG00000166037|Q86XR8-4|CEP57', 'nc|ENSG00000166037|Q86XR8-5|CEP57', 'ENSG00000166037|ENST00000325542|CEP57'] 107901 11629 SVVRESKSF True PC9_epitope_Rep5 1037.5505587610498 1037.54946993586 49.726 2 -1.1650640482412633 0.3629736693269654 1.0 ['ENSG00000197405|ENST00000355085|C5AR1'] 56423 9088 LDEFLVKN True NCI_RA007_Epitope_Rep5 976.5229470308799 976.52184993586 41.612 2 -1.165081960698031 0.36298167559007616 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000496360.5_1_1:39934274-39950491:+|nuORF', 'ENST00000497807.1_1_1:39934322-39950491:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 47318 18261 IVEIIATK True PC9_epitope_Rep1 885.55351888317 885.55242993586 75.032 2 -1.1651279331858866 0.3629896816519411 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2'] 64083 24479 LPCRFKYR True PC9_epitope_Rep2 1081.58550480113 1081.58440993586 99.748 2 -1.1652323875475628 0.3629976875125679 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 5612 17004 ANNLELEEM True PC9_epitope_Rep1 1061.46992548185 1061.4688299358602 70.228 2 -1.165241833234497 0.36300569317196396 1.0 ['ENSG00000122557|ENST00000311350|HERPUD2'] 13001 2769 DLMAVTPAQSL True H1975_Epitope_Rep2 1144.579810284 1144.5787099358602 14.681 2 -1.1652627683394043 0.363013698630137 1.0 ['ADAM22|p.L370P|1|0.47|ENSG00000008277|chr7:88134360-88134360|T/C|missense_variant'] 135934 14615 WPWLRWWQELW True H1975_Epitope_Rep1 1684.83030285296 1684.82920993586 61.427 2 -1.165295473100791 0.3630297089428442 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 102793 2425 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 13.262 2 -1.1653131516152875 0.3630297089428442 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 13883 6050 DQTLPGVDIQQ True NCI_RA007_Epitope_Rep2 1212.59863115228 1212.5975299358602 28.138 2 -1.1653418836041398 0.363040036190907 1.0 ['ENSG00000008226|ENST00000308059|DLEC1', 'nc|ENSG00000008226|Q9Y238-3|DLEC1'] 47641 13474 IWETFRRWHRK True H1975_Epitope_Rep1 1613.86914797317 1613.8680499358602 56.944 2 -1.1653467816722303 0.363040036190907 1.0 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 56032 12372 LASPRFSI True PC9_epitope_Rep3 889.50215201665 889.50104993586 52.618 2 -1.1654349771956225 0.363040036190907 1.0 ['ENST00000571732.5_1_17:1264590-1265226:-|nuORF'] 75947 11350 NLSSIQQKL True PC9_epitope_Rep1 1029.5818588893299 1029.5807699358602 48.536 2 -1.1654523100142362 0.363040036190907 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 42699 17918 IEKKAGKNV True PC9_epitope_Rep5 985.5920296502098 985.59092993586 73.939 2 -1.165479613246961 0.363040036190907 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 32722 23993 GGWAGGNA True H1975_Epitope_Rep3 688.2928875263999 688.2923349679301 99.997 1 -1.1654910870314872 0.363040036190907 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR'] 67280 14244 LSRRYLRDRK True NCI_RA007_Epitope_Rep1 1361.8003997070098 1361.79930993586 59.442 2 -1.1655854071557767 0.3630731725706531 1.0 ['ENST00000475229.2_1_1:1663720-1663897:-|nuORF'] 105552 24819 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 107.32 2 -1.1657346635731842 0.36313144006031667 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 110552 24059 TFPVKGLK True NCI_RA007_Epitope_Rep3 888.5432885526399 888.54218993586 104.19 2 -1.1657606546577564 0.36315432362475814 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 86790 8186 QLNALQRHRR True H1975_Epitope_Rep3 1290.73813380362 1290.7370299358602 36.467 2 -1.1657633378193433 0.36315432362475814 1.0 ['ENSG00000125812|ENST00000338121|GZF1', 'nc|ENSG00000125812|Q9H116-4|GZF1'] 111997 15703 TIRNQLLN True PC9_epitope_Rep1 970.5559784946599 970.55488993586 65.224 2 -1.165776935349034 0.36315432362475814 1.0 ['ASB17|p.T270N|1|0.23|ENSG00000154007|chr1:75919031-75919031|G/T|missense_variant'] 29151 21413 FTPLHMAV True PC9_epitope_Rep2 914.46840936022 914.46730993586 87.836 2 -1.165792569631304 0.36315432362475814 1.0 ['ENST00000431297.1_1_21:15134673-15136650:+|nuORF', 'ENSG00000141965|ENST00000269856|FEM1A'] 14447 9189 DTEKLKMYHSL True NCI_RA007_Epitope_Rep1 1363.68058695443 1363.6794899358601 39.745 2 -1.1657989662215678 0.36315432362475814 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 29340 13231 FVDFCYSSIIA True NCI_RA007_Epitope_Rep2 1263.58456131127 1263.5834699358602 56.099 2 -1.165807610729285 0.36315432362475814 1.0 ['OR5D16|p.L100Ffs*14|1|0.43|ENSG00000205029|chr11:55839047-55839048|-/T|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16', 'ENSG00000186119|ENST00000333976|OR5D18'] 110655 4034 TFWYWNYNYYP True NCI_RA007_Epitope_Rep2 1615.6772158261497 1615.6755749037902 20.329 3 -1.1658339312560315 0.36317032718500275 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 68599 9422 LTHLYSHLK True H1975_Epitope_Rep1 1110.6185787512202 1110.61748993586 41.154 2 -1.1659270770153463 0.36317032718500275 1.0 ['ENSG00000086544|ENST00000263370|ITPKC'] 33086 14556 GIPANRIVL True PC9_epitope_Rep4 951.5865503469499 951.58544993586 63.903 2 -1.1660271447752188 0.36319089321388637 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 129540 19066 VRLAVFLIY True NCI_RA007_Epitope_Rep1 1092.6695516949198 1092.66844993586 78.303 2 -1.1660778813963093 0.3632114587259706 1.0 ['SORCS3|p.G1137R|1|0.09|ENSG00000156395|chr10:105256890-105256890|G/C|missense_variant'] 47168 4936 ITWNPHWYRQP True NCI_RA007_Epitope_Rep5 1496.7313170876798 1496.72968490379 25.687 3 -1.166129322030552 0.3632194594866254 1.0 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF'] 119673 7343 VAVGHSLP True NCI_RA007_Epitope_Rep1 778.43373810366 778.43264993586 32.557 2 -1.1662358141819547 0.3632400241230274 1.0 ['SIM1|p.Q753Kfs*9|1|0.21|ENSG00000112246|chr6:100390405-100390405|G/-|frameshift_variant', 'ENSG00000112246|ENST00000369208|SIM1'] 81850 19715 PLQLQGPASL True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 80.659 2 -1.1662932072078511 0.3632480243237471 1.0 ['ENST00000370520.3_1_20:61273322-61274596:-|nuORF'] 100054 9970 SIRLATTPV True PC9_epitope_Rep1 956.5654805492001 956.56438993586 43.213 2 -1.1664349709122348 0.36328915132860107 1.0 ['ENSG00000132837|ENST00000255189|DMGDH'] 132951 6384 VVPAEIAKKPR True NCI_RA007_Epitope_Rep3 1206.7448418934998 1206.74320490379 32.114 3 -1.166452960255407 0.36328915132860107 1.0 ['nc|ENSG00000189308|Q6MZP7-3|LIN54'] 93607 13262 RQPGPHAD True NCI_RA007_Epitope_Rep3 876.42021329784 876.41910993586 59.439 2 -1.1666025912658509 0.3633679661293767 1.0 ['ENST00000360416.7_1_17:8378161-8378500:-|nuORF'] 20658 12650 EQALEDRRLSP True H1975_Epitope_Rep3 1312.67352742804 1312.67242993586 53.865 2 -1.1666094102027382 0.3633679661293767 1.0 ['FAM83C|p.P541L|1|0.39|ENSG00000125998|chr20:35287157-35287157|G/A|missense_variant'] 28533 10477 FSEIEAEKN True H1975_Epitope_Rep1 1065.4978544818498 1065.4967499358602 45.255 2 -1.1666255698829804 0.3633759642202065 1.0 ['NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 33911 12742 GLQNKLLELNS True PC9_epitope_Rep6 1227.68230120659 1227.6812099358601 60.498 2 -1.166698152428236 0.36341251994321677 1.0 ['ENSG00000130701|ENST00000252998|RBBP8NL'] 43419 19436 IGGARQGG True PC9_epitope_Rep3 714.3772858566999 714.37673496793 79.987 1 -1.166702929835513 0.36341251994321677 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 85361 19830 QETTWRIDTV True PC9_epitope_Rep1 1247.61461556959 1247.61350993586 81.09 2 -1.166726684876612 0.36341251994321677 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 35610 10724 GTCLPNALSP True H1975_Epitope_Rep3 971.4746169394699 971.4740649679301 46.326 1 -1.166794752185689 0.3634285140007286 1.0 ['ENSG00000215421|ENST00000299687|ZNF407', 'nc|ENSG00000215421|Q9C0G0-3|ZNF407', 'nc|ENSG00000215421|Q9C0G0-2|ZNF407'] 53781 12477 KTALVVRF True PC9_epitope_Rep1 932.5807366905199 932.57962993586 52.86 2 -1.166795065385286 0.3634285140007286 1.0 ['ENST00000515677.1_1_4:53728674-53729580:+|nuORF', 'ENSG00000128045|ENST00000248706|RASL11B'] 104522 16097 SQNLEYPL True PC9_epitope_Rep2 962.47091145802 962.46980993586 67.175 2 -1.1670683471805265 0.3635244460077383 1.0 ['ENSG00000175518|ENST00000380184|UBQLNL'] 16013 7053 EDSTWERRQD True H1975_Epitope_Rep3 1320.5694562823198 1320.5683499358602 32.094 2 -1.1671841894514605 0.36353929832054166 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7'] 116990 11432 TVGSRNTT True H1975_Epitope_Rep1 834.4195445915001 834.4189949679301 48.954 1 -1.167189676803892 0.36353929832054166 1.0 ['ENST00000366758.7_1_1:227922448-227922508:-|nuORF'] 115158 14887 TRDNPEMNPF True NCI_RA007_Epitope_Rep4 1219.52917169347 1219.52806993586 64.725 2 -1.1672021096056482 0.36353929832054166 1.0 ['ENST00000240100.6_1_8:29193192-29193309:-|nuORF'] 100581 7979 SLCLAWAYLL True PC9_epitope_Rep2 1151.6049028330299 1151.6032649037902 36.054 3 -1.1672345844464627 0.36353929832054166 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF', 'nc|ENSG00000169247|Q8TF17-4|SH3TC2'] 121773 13579 VFNNVTKN True NCI_RA007_Epitope_Rep1 934.4872302285 934.48612993586 56.829 2 -1.167260903600361 0.36353929832054166 1.0 ['ENSG00000166897|ENST00000402918|ELFN2'] 18510 4590 EKHFQREEQER True H1975_Epitope_Rep3 1514.7226028787798 1514.72150993586 22.776 2 -1.1672736629419198 0.3635552875858864 1.0 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7', 'nc|ENSG00000135525|Q14244-5|MAP7', 'nc|ENSG00000135525|Q14244-3|MAP7'] 17651 15653 EHKEIEYV True PC9_epitope_Rep4 1045.50802524273 1045.5069299358602 68.136 2 -1.1672748989672181 0.3635552875858864 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 98769 22737 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 93.897 3 -1.1672791766417532 0.3635587152851921 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 86162 6404 QIEAVLLNS True PC9_epitope_Rep4 985.54441075145 985.54330993586 31.724 2 -1.1672881256442655 0.3635587152851921 1.0 ['ENSG00000118971|ENST00000261254|CCND2'] 16475 11104 EELLILLIY True H1975_Epitope_Rep1 1117.6634632549699 1117.6623699358602 47.676 2 -1.1672987548080944 0.36357013665594856 1.0 ['ENSG00000184178|ENST00000401642|SCFD2', 'nc|ENSG00000184178|Q8WU76-2|SCFD2'] 103906 11244 SQAHRNFLEDG True H1975_Epitope_Rep3 1272.58471242364 1272.58360993586 48.352 2 -1.1673038462175411 0.36357013665594856 1.0 ['ENSG00000116209|ENST00000234831|TMEM59'] 45296 11934 IPWRHATRH True NCI_RA007_Epitope_Rep3 1172.63154347676 1172.62990490379 54.07 3 -1.1673083869882794 0.36357013665594856 1.0 ['nc|ENSG00000128604|Q13568-5|IRF5', 'nc|ENSG00000128604|Q13568-4|IRF5', 'nc|ENSG00000128604|Q13568|IRF5', 'nc|ENSG00000128604|Q13568-3|IRF5', 'ENSG00000128604|ENST00000357234|IRF5', 'nc|ENSG00000128604|Q13568-6|IRF5', 'ENST00000461416.1_1_7:128582135-128587139:+|nuORF', 'ENST00000488569.5_1_7:128577991-128586617:+|nuORF'] 58737 16935 LERYGPLL True PC9_epitope_Rep1 959.5440168286298 959.54290993586 69.963 2 -1.1673733825250916 0.36357356376698735 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1'] 44790 14125 IMLIFLGH True NCI_RA007_Epitope_Rep4 942.5360949972201 942.53498993586 61.613 2 -1.1673842015950318 0.36357356376698735 1.0 ['TADA1-CADM3|1|fusion', 'nc|ENSG00000162706|Q8N126-3|CADM3', 'ENSG00000162706|ENST00000368125|CADM3', 'nc|ENSG00000162706|Q8N126-2|CADM3'] 5750 7603 APARLPAAPA True PC9_epitope_Rep3 933.5396001545298 933.53850993586 34.242 2 -1.167410973413258 0.36361809550124335 1.0 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 38786 16851 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 70.065 2 -1.1674960329736368 0.36361809550124335 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 669 5252 AATQQWLGVQR True NCI_RA007_Epitope_Rep5 1256.6625688215197 1256.66092490379 26.899 3 -1.1675465341291134 0.36361809550124335 1.0 ['SNAPC4|p.G1288V|1|0.29|ENSG00000165684|chr9:136377964-136377964|C/A|missense_variant'] 102791 2180 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 11.904 2 -1.1676046269638898 0.36361809550124335 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 19957 11238 ELVRNGDEEN True PC9_epitope_Rep1 1173.5261944880097 1173.52508993586 48.106 2 -1.167620672155524 0.3636203800218519 1.0 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000475590.5_1_3:50151466-50154632:+|nuORF'] 44802 13005 IMSKLAGESES True PC9_epitope_Rep6 1150.55398945898 1150.55288993586 61.605 2 -1.1676403214635391 0.3636203800218519 1.0 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 13447 5560 DNDGSTALSIA True PC9_epitope_Rep2 1062.4829326937 1062.48182993586 26.777 2 -1.167732502027186 0.3636203800218519 1.0 ['nc|ENSG00000107104|Q14678-2|KANK1', 'ENSG00000107104|ENST00000382297|KANK1'] 66171 4578 LSEQNPAAS True PC9_epitope_Rep2 915.4297749220299 915.42866993586 22.977 2 -1.1677370089117043 0.3636203800218519 1.0 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2'] 116681 14020 TVCHDRWST True PC9_epitope_Rep1 1103.48182757823 1103.4807299358602 58.766 2 -1.1677793944659527 0.3636203800218519 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 64611 10606 LPSSPERLAL True PC9_epitope_Rep5 1081.61315901761 1081.61206993586 45.785 2 -1.1678627672793662 0.3636215231995982 1.0 ['EGLN2|p.A173S|1|0.57|ENSG00000269858|chr19:40801089-40801089|G/T|missense_variant'] 122265 7718 VGASIKIAP True PC9_epitope_Rep1 854.5225531080599 854.52144993586 34.506 2 -1.1678676225045024 0.3636215231995982 1.0 ['ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 93710 14214 RQVVLPQL True PC9_epitope_Rep4 951.5865503469497 951.5860049679301 62.583 1 -1.1678942429521062 0.3636215231995982 1.0 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000523654.5_1_5:71615928-71616063:-|nuORF', 'ENST00000520285.5_1_5:71590560-71616015:-|nuORF', 'ENST00000522404.5_1_5:71537397-71616033:-|nuORF'] 101945 19181 SLQDFKEL True PC9_epitope_Rep4 978.5022115862998 978.50110993586 81.877 2 -1.1678965712610945 0.3636215231995982 1.0 ['APOB|p.P3318Q|1|0.17|ENSG00000084674|chr2:21006915-21006915|G/T|missense_variant'] 138829 14328 YIYIRGEFYNE True H1975_Epitope_Rep1 1465.6877805098495 1465.6866899358602 60.302 2 -1.1679285124551892 0.3636215231995982 1.0 ['ENST00000526770.5_1_11:67376014-67378079:+|nuORF', 'ENST00000528377.1_1_11:67375903-67377304:+|nuORF', 'ENST00000526169.1_1_11:67376170-67379399:+|nuORF', 'ENST00000524838.5_1_11:67374453-67377304:+|nuORF', 'nc|ENSG00000167792|P49821-2|NDUFV1', 'ENSG00000167792|ENST00000322776|NDUFV1'] 5403 12166 ALSVQPCVHV True PC9_epitope_Rep4 1051.54845058607 1051.5473499358602 54.613 2 -1.1679650995768254 0.3636215231995982 1.0 ['ENST00000257963.8_1_12:52388223-52388508:+|nuORF'] 43632 15689 IGWNNKRTL True PC9_epitope_Rep1 1100.60907669668 1100.6079699358602 65.17 2 -1.167965541585205 0.3636215231995982 1.0 ['ENST00000329293.3_1_11:7506930-7507047:+|nuORF'] 125766 23198 VKTSKSSS True PC9_epitope_Rep4 822.4446967101801 822.44414496793 97.46 1 -1.1679798882760175 0.3636215231995982 1.0 ['nc|ENSG00000185261|Q8IV33-3|KIAA0825', 'nc|ENSG00000185261|Q8IV33|KIAA0825', 'ENSG00000185261|ENST00000682413|KIAA0825', 'nc|ENSG00000185261|Q8IV33-2|KIAA0825'] 29929 18552 FVYGEPREL True PC9_epitope_Rep5 1108.5553097883198 1108.5542099358602 76.383 2 -1.1680149799778232 0.3636283730333128 1.0 ['ENSG00000046774|ENST00000247452|MAGEC2'] 45088 20228 IPKNSHKKGAK True NCI_RA007_Epitope_Rep1 1206.7196897748202 1206.71858993586 82.888 2 -1.1680206530106032 0.3636283730333128 1.0 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2'] 130775 12635 VTAELPGD True NCI_RA007_Epitope_Rep5 800.3915985081599 800.39105496793 55.253 1 -1.1680716775540956 0.3636283730333128 1.0 ['nc|ENSG00000162367|P17542-2|TAL1', 'ENSG00000162367|ENST00000691006|TAL1'] 39989 7842 HPLWLRDT True H1975_Epitope_Rep1 1036.5454138109599 1036.5443099358602 35.114 2 -1.168076825598816 0.3636283730333128 1.0 ['nc|ENSG00000171813|Q6NUJ5-2|PWWP2B', 'PWWP2B|p.G519Rfs*30|1|0.06|ENSG00000171813|chr10:132406055-132406056|GG/-|frameshift_variant', 'ENSG00000171813|ENST00000305233|PWWP2B'] 32599 15451 GGHGRCSP True NCI_RA007_Epitope_Rep3 769.32895576529 769.32784993586 68.333 2 -1.1681056786611843 0.36363864649381633 1.0 ['ENST00000358187.2_1_10:106075300-106075366:-|nuORF'] 80629 17646 PGSAKRGR True PC9_epitope_Rep3 827.4725832238698 827.47148993586 73.068 2 -1.1682050660155243 0.36363864649381633 1.0 ['ENSG00000205639|ENST00000338315|MFSD2B'] 11089 14508 DCGFGDGG True NCI_RA007_Epitope_Rep5 726.2279043113399 726.2273549679301 62.481 1 -1.1682177323431067 0.36363864649381633 1.0 ['ENSG00000108582|ENST00000225719|CPD'] 84407 8632 QADITYEGRQK True NCI_RA007_Epitope_Rep1 1307.6469783270297 1307.6458899358602 37.578 2 -1.1682280332862645 0.36363864649381633 1.0 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'GOPC|p.R190Lfs*4|1|0.11|ENSG00000047932|chr6:117575258-117575258|C/-|frameshift_variant', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 116727 9498 TVDKHYRDF True NCI_RA007_Epitope_Rep3 1179.56727145435 1179.56563490379 44.456 3 -1.1682311453958782 0.36363864649381633 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'ENST00000494648.1_1_3:124174014-124181481:+|nuORF'] 44891 4538 INLKGEAQP True PC9_epitope_Rep5 968.5290950404799 968.52798993586 22.522 2 -1.168246869530338 0.36363864649381633 1.0 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 55260 12478 LADLVGVRPNL True NCI_RA007_Epitope_Rep2 1165.6819072837698 1165.68080993586 53.147 2 -1.1683249914257627 0.3636580496930282 1.0 ['ENSG00000131781|ENST00000254090|FMO5'] 139463 9417 YLQPSSVSSM True PC9_epitope_Rep2 1097.50631099057 1097.5052099358602 41.562 2 -1.1683274101340055 0.3636580496930282 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P', 'nc|ENSG00000255298|Q8NG78|OR8G5', 'ENST00000533406.2_1_11:124085485-124086391:+|nuORF', 'nc|ENSG00000255425|P0DMU2|OR8G3P', 'ENSG00000255298|ENST00000641992|OR8G5'] 132034 6525 VTSTLTIK True PC9_epitope_Rep2 861.5171333744499 861.51602993586 30.514 2 -1.1683524490672998 0.3636580496930282 1.0 ['nc|ENSG00000211899|P01871-1|IGHM', 'nc|ENSG00000211899|P01871|IGHM'] 35301 24635 GRKAGPPP True PC9_epitope_Rep4 778.4449714936999 778.44386993586 103.25 2 -1.168357196922487 0.3636580496930282 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 105555 25093 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 108.46 2 -1.1684101211506983 0.363667177182455 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 117112 12494 TVKDNSLL True NCI_RA007_Epitope_Rep4 888.4916469026 888.49054993586 55.07 2 -1.1684338439024036 0.363667177182455 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4', 'FRMPD4|p.S1105Kfs*31|1|0.55|ENSG00000169933|chrX:12718133-12718134|-/A|frameshift_variant', 'FRMPD4|p.Q347Afs*52|1|0.23|ENSG00000169933|chrX:12701975-12701976|-/A|frameshift_variant', 'FRMPD4|p.A947Qfs*130|1|0.11|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant'] 58959 7361 LETTGTSLP True PC9_epitope_Rep2 917.47057710485 917.46948993586 33.696 2 -1.1684421317996256 0.363667177182455 1.0 ['ENSG00000136014|ENST00000258499|USP44'] 59401 19407 LFLLYRHR True PC9_epitope_Rep5 1116.65563296628 1116.6545299358602 79.696 2 -1.1684751541809846 0.363667177182455 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B'] 74695 7373 NGSPRLLEG True PC9_epitope_Rep1 941.4930438849299 941.49194993586 33.173 2 -1.1684811343975223 0.363667177182455 1.0 ['ENSG00000156453|ENST00000287008|PCDH1', 'nc|ENSG00000156453|Q08174|PCDH1'] 97239 4169 SEAAQLLEA True H1975_Epitope_Rep2 930.4658260775799 930.46472993586 21.139 2 -1.1685149484780164 0.363667177182455 1.0 ['ENST00000494993.1_1_15:91475575-91475770:-|nuORF', 'nc|ENSG00000184508|Q8N4P3-2|HDDC3', 'ENSG00000184508|ENST00000394272|HDDC3'] 768 9162 AAVQLFCFC True NCI_RA007_Epitope_Rep2 1000.4510450439199 1000.4504749679301 40.244 1 -1.1686081226473166 0.363667177182455 1.0 ['ENST00000508535.1_1_4:38802554-38806811:-|nuORF', 'ENST00000506146.5_1_4:38802554-38858398:-|nuORF'] 106089 5765 STCNSTVETR True NCI_RA007_Epitope_Rep1 1096.48188714788 1096.48078993586 26.479 2 -1.1686199356058686 0.363667177182455 1.0 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'ENST00000490880.5_1_2:231065532-231076254:-|nuORF', 'nc|ENSG00000135899|Q9HB58-2|SP110'] 64077 17660 LPAVLRPL True PC9_epitope_Rep4 877.57492303409 877.57382993586 75.955 2 -1.1686277681319581 0.363667177182455 1.0 ['ENST00000534806.1_1_19:15226885-15227589:-|nuORF', 'ENST00000533086.5_1_19:15226645-15227634:-|nuORF'] 57618 13281 LEEDIPKRKNR True NCI_RA007_Epitope_Rep2 1396.7786612029197 1396.7775699358601 56.295 2 -1.1687259147187674 0.3636865757826818 1.0 ['nc|ENSG00000205683|Q92784-3|DPF3', 'nc|ENSG00000205683|Q92784-4|DPF3', 'nc|ENSG00000205683|Q92784-2|DPF3', 'nc|ENSG00000205683|Q92784-5|DPF3', 'ENSG00000205683|ENST00000556509|DPF3'] 20752 11622 EQFEEKKKRAK True H1975_Epitope_Rep3 1419.78341223019 1419.7823099358602 49.837 2 -1.1687469914330342 0.3636865757826818 1.0 ['nc|ENSG00000173421|Q8IYA8-3|IHO1', 'ENSG00000173421|ENST00000452691|IHO1'] 139529 20713 YLSVITTNHI True PC9_epitope_Rep4 1159.6237237013102 1159.62262993586 87.835 2 -1.168759054002775 0.3636865757826818 1.0 ['PXK|p.N101S|1|0.19|ENSG00000168297|chr3:58382614-58382614|A/G|missense_variant'] 25529 18058 FEIGELRASL True PC9_epitope_Rep6 1133.60807363717 1133.6069699358602 82.09 2 -1.1687892868510699 0.3636865757826818 1.0 ['ENST00000513868.6_1_8:129001487-129082505:+|nuORF'] 120222 18851 VEARRWLRQAR True NCI_RA007_Epitope_Rep1 1439.82219778075 1439.82110993586 77.471 2 -1.1688513509678924 0.3636899979915646 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 18771 10466 ELDAVLEVPVP True H1975_Epitope_Rep1 1179.63870505911 1179.6376099358602 45.212 2 -1.1688712515668895 0.3636899979915646 1.0 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 35953 12203 GTTLAMHV True PC9_epitope_Rep1 828.4163737873599 828.41526993586 51.797 2 -1.1689082279058882 0.3636979853135003 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L'] 69321 22918 LTVFWMDFV True PC9_epitope_Rep1 1156.56270366788 1156.5616099358601 92.952 2 -1.1689221984190763 0.3637014071070832 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 80440 23414 PGKRLIDRIVE True PC9_epitope_Rep3 1294.7721192705 1294.77046490379 95.341 3 -1.1689451574455432 0.3637014071070832 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 78206 4498 NYFEGTGY True PC9_epitope_Rep2 949.3817621004498 949.3806699358599 22.658 2 -1.1689822551091062 0.36370482872886567 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 37743 25100 GWRRRRLQA True PC9_epitope_Rep1 1197.69554071565 1197.6938849037901 101.43 3 -1.1689896598483636 0.36370482872886567 1.0 ['ENST00000281243.9_1_4:17510922-17513691:-|nuORF'] 58784 7222 LESILMPKLEH True NCI_RA007_Epitope_Rep1 1308.71115880672 1308.71006993586 32.081 2 -1.1690290767524067 0.3637128153633739 1.0 ['ENSG00000155754|ENST00000439140|C2CD6', 'nc|ENSG00000155754|Q53TS8-2|C2CD6', 'nc|ENSG00000155754|Q53TS8-1|C2CD6', 'nc|ENSG00000155754|Q53TS8-3|C2CD6'] 35300 24823 GRKAGPPP True PC9_epitope_Rep4 778.4449714936999 778.44386993586 103.99 2 -1.1690644877342702 0.36371623656993674 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 15353 10796 EAGKRKSSSQP True H1975_Epitope_Rep3 1173.61019889549 1173.60910993586 46.606 2 -1.1690840614638058 0.36371623656993674 1.0 ['ENSG00000177504|ENST00000317103|VCX2', 'ENSG00000169059|ENST00000381089|VCX3A', 'ENSG00000182583|ENST00000688183|VCX', 'nc|ENSG00000205642|Q9H321-2|VCX3B', 'ENSG00000205642|ENST00000381032|VCX3B'] 86248 11915 QINLQKQPK True H1975_Epitope_Rep1 1095.6400424717897 1095.6389499358602 50.832 2 -1.1691762134719683 0.36376187667089227 1.0 ['ENSG00000180370|ENST00000327134|PAK2'] 141456 6200 YTGGVTGM True NCI_RA007_Epitope_Rep2 784.34254014076 784.3419949679301 28.724 1 -1.1692088028994 0.3637698621884178 1.0 ['nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 25895 5994 FFLLIIRKLL True PC9_epitope_Rep3 1274.8478504100597 1274.84674993586 28.111 2 -1.1692673244686578 0.3637778475054911 1.0 ['nc|ENSG00000068878|Q14997-3|PSME4'] 100543 4905 SLAWSVGGHL True NCI_RA007_Epitope_Rep1 1025.52942939365 1025.52832993586 23.159 2 -1.1693395282726131 0.36378239317311917 1.0 ['ENST00000506742.2_1_5:108120754-108121222:+|nuORF'] 131828 7480 VTQQLLDDP True PC9_epitope_Rep5 1027.5185899264297 1027.51748993586 33.724 2 -1.1693546321320274 0.36378239317311917 1.0 ['ENSG00000114771|ENST00000232892|AADAC'] 71507 22918 LYYRKDKRRQ True PC9_epitope_Rep4 1424.80006535384 1424.7989699358602 96.373 2 -1.1693837502365083 0.36378239317311917 1.0 ['nc|ENSG00000196338|Q9NZ94-3|NLGN3', 'nc|ENSG00000196338|Q9NZ94-2|NLGN3', 'ENSG00000196338|ENST00000358741|NLGN3'] 66275 11325 LSFHWPDAPF True PC9_epitope_Rep3 1215.57129420563 1215.56965490379 48.568 3 -1.1694037773310646 0.36378239317311917 1.0 ['ENST00000531676.1_1_11:58910590-58910668:+|nuORF'] 34470 5668 GPKWTFTV True PC9_epitope_Rep1 934.4912529797799 934.49014993586 26.623 2 -1.1694207732183077 0.36378239317311917 1.0 ['ENSG00000173662|ENST00000333172|TAS1R1', 'nc|ENSG00000173662|Q7RTX1-2|TAS1R1', 'nc|ENSG00000173662|Q7RTX1-4|TAS1R1'] 79215 5330 PAPLRAAPA True PC9_epitope_Rep2 862.5024863698198 862.50138993586 25.891 2 -1.1694256070852633 0.36378239317311917 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 79838 8172 PEGVIEHKV True H1975_Epitope_Rep3 1006.54474510462 1006.54364993586 36.413 2 -1.1694749524274448 0.36378239317311917 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.E1915Q|1|0.14|ENSG00000155657|chr2:178776121-178776121|C/G|missense_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 22826 10889 EVAGAVWTRR True H1975_Epitope_Rep3 1143.61489035311 1143.61378993586 46.969 2 -1.1694881828556323 0.36378239317311917 1.0 ['ENST00000581616.2_1_17:16855864-16875385:-|nuORF'] 84528 5210 QAQKQLLEYRT True NCI_RA007_Epitope_Rep5 1376.7412130650396 1376.7401099358601 26.736 2 -1.1694995871755989 0.36378239317311917 1.0 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'ENST00000595900.1_1_19:16980720-16983386:+|nuORF'] 98662 5840 SGCACGCGCE True NCI_RA007_Epitope_Rep4 888.2234302612 888.22232993586 29.088 2 -1.169503048908777 0.36378239317311917 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 135796 3956 WNAYMLFYQRV True NCI_RA007_Epitope_Rep2 1489.71764116949 1489.71598490379 20.025 3 -1.1695923363533396 0.3637972142050446 1.0 ['ENSG00000162402|ENST00000294383|USP24'] 59246 9241 LFFGAGAC True NCI_RA007_Epitope_Rep1 784.3577962820799 784.35724496793 39.943 1 -1.1695974033610355 0.3637972142050446 1.0 ['ENSG00000171773|ENST00000301944|NXNL1'] 16367 10538 EEILDGNDEKY True NCI_RA007_Epitope_Rep2 1323.58304065779 1323.5819499358602 45.586 2 -1.1696199486562617 0.3637972142050446 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1', 'ENST00000491967.1_1_22:24135798-24143581:+|nuORF'] 84981 5596 QEETKTVL True PC9_epitope_Rep6 946.4971262058599 946.49602993586 29.58 2 -1.169640381515121 0.3637972142050446 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 124825 22247 VHGVTFVF True PC9_epitope_Rep6 904.48068829608 904.47958993586 98.53 2 -1.1696636071898117 0.3637972142050446 1.0 ['FPR3|p.I228Nfs*8|1|0.63|ENSG00000187474|chr19:51824426-51824427|-/A|frameshift_variant', 'FPR3|p.N294*|1|0.09|ENSG00000187474|chr19:51824621-51824622|-/T|frameshift_variant', 'ENSG00000187474|ENST00000339223|FPR3'] 133079 2013 VVPVLAGVGPL True NCI_RA007_Epitope_Rep1 1019.6379172134699 1019.63682993586 10.578 2 -1.169684372158778 0.3638051975756359 1.0 ['nc|ENSG00000167799|Q8WV74-2|NUDT8', 'ENSG00000167799|ENST00000376693|NUDT8', 'ENST00000534054.1_1_11:67395778-67396734:-|nuORF'] 98767 21918 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 90.626 3 -1.1697401289519374 0.3638508256788636 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 137375 23740 YDSWKITG True NCI_RA007_Epitope_Rep5 968.46034677432 968.45924993586 98.661 2 -1.1697621100619036 0.3638713563299161 1.0 ['ENST00000481320.5_1_10:123727168-123733579:-|nuORF', 'nc|ENSG00000107672|Q9NXX6-2|NSMCE4A', 'ENSG00000107672|ENST00000369023|NSMCE4A'] 23670 5518 EYCYPNFLP True NCI_RA007_Epitope_Rep1 1144.4899326504399 1144.48828490379 25.535 3 -1.1697989935193338 0.3639044344618165 1.0 ['FAM217B|p.Y141C|1|0.57|ENSG00000196227|chr20:59944365-59944365|A/G|missense_variant'] 45163 17976 IPPMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 74.06 2 -1.1698148266052353 0.36390784982935154 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 67379 8313 LSSLATAKSI True NCI_RA007_Epitope_Rep2 989.57571087973 989.5746099358599 36.974 2 -1.169815771555663 0.36390784982935154 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 111740 13063 TIHILVEVK True PC9_epitope_Rep1 1050.6437308698999 1050.6426299358602 55.115 2 -1.1698540803625772 0.36392266094528297 1.0 ['ENST00000499292.2_1_4:36274632-36274905:+|nuORF'] 139053 23137 YLCRQRPK True PC9_epitope_Rep6 1062.5756683934198 1062.5745699358602 102.1 2 -1.169864231298959 0.36392266094528297 1.0 ['ENST00000535164.5_1_16:19612936-19627472:+|nuORF'] 113046 9088 TLNKTDDV True PC9_epitope_Rep5 904.4501760134399 904.44906993586 39.904 2 -1.1698790392969984 0.36392266094528297 1.0 ['ENST00000225941.5_1_17:47300279-47300378:+|nuORF'] 92828 7758 RPARARGWCP True PC9_epitope_Rep1 1168.60361447676 1168.60250993586 34.662 2 -1.1698866385971942 0.36392266094528297 1.0 ['ENST00000489112.5_1_3:98451315-98475259:+|nuORF'] 91172 1491 RGAGSKRKRR True NCI_RA007_Epitope_Rep2 1170.71700443622 1170.71536490379 8.1254 3 -1.1699067940285766 0.36392266094528297 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 123462 12227 VGPAGPFF True PC9_epitope_Rep5 790.40137534622 790.40026993586 52.019 2 -1.1699154220612975 0.3639306416401094 1.0 ['ENSG00000165606|ENST00000374139|DRGX'] 117909 19762 TWRRECPRWWR True PC9_epitope_Rep3 1630.8051678176196 1630.80406993586 81.243 2 -1.169974528099503 0.363938622134675 1.0 ['ENST00000599470.5_2_19:39616427-39616532:+|nuORF'] 11091 14706 DCGFGDGG True NCI_RA007_Epitope_Rep5 726.2279043113399 726.2273549679301 63.238 1 -1.1699943300502804 0.36394203625870397 1.0 ['ENSG00000108582|ENST00000225719|CPD'] 67871 528 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 2.7729 3 -1.1701259707430685 0.36394203625870397 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 28700 11029 FSRGAEFRNK True PC9_epitope_Rep5 1210.6207040095398 1210.6190549037901 47.412 3 -1.1701541943186062 0.3639739552622665 1.0 ['ENST00000416109.2_1_12:7507704-7520763:-|nuORF'] 110392 8591 TEVLNPSKSFM True H1975_Epitope_Rep1 1251.61692406871 1251.6158299358601 37.974 2 -1.1702396802506745 0.3639739552622665 1.0 ['nc|ENSG00000124256|Q9H171-2|ZBP1'] 62815 21009 LLLVSSPP True PC9_epitope_Rep2 824.50075503432 824.50020496793 86.265 1 -1.1702559883495083 0.3639739552622665 1.0 ['ENST00000428865.2_1_6:74404306-74404579:-|nuORF'] 93663 18163 RQRREFREKRL True NCI_RA007_Epitope_Rep3 1572.9073243870396 1572.90568490379 79.566 3 -1.170257051057506 0.3639739552622665 1.0 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'CLASRP|p.E614Sfs*11|1|0.06|ENSG00000104859|chr19:45069214-45069214|G/-|frameshift_variant', 'USF2-CLASRP|2|fusion', 'USF2-CLASRP|1|fusion'] 6558 20866 APVAAAALA True PC9_epitope_Rep4 753.43848913093 753.43738993586 88.415 2 -1.1702661254315168 0.3639750617810505 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 15699 12002 EAVRRLKSK True NCI_RA007_Epitope_Rep3 1085.66692592597 1085.66582993586 54.334 2 -1.1703358865259776 0.3639750617810505 1.0 ['ENSG00000064995|ENST00000361288|TAF11'] 39696 4589 HLSIVWC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1041.5429715622402 1041.5418699358602 22.477 2 -1.170376042158155 0.3639750617810505 1.0 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1', 'nc|ENSG00000197121|Q75T13-3|PGAP1', 'nc|ENSG00000197121|Q75T13-4|PGAP1'] 76106 1736 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 9.5428 3 -1.1703801204391804 0.3639750617810505 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 125529 26264 VKGAKLHD True PC9_epitope_Rep5 866.4974009893799 866.49630993586 106.82 2 -1.170385486824646 0.3639750617810505 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 22535 4331 ETHIRVPA True PC9_epitope_Rep1 921.50321464581 921.50210993586 21.545 2 -1.170407744769487 0.3639750617810505 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 80838 550 PHQWQYLHPP True H1975_Epitope_Rep1 1301.63054041725 1301.62888490379 2.8925 3 -1.1704136133447773 0.3639750617810505 1.0 ['SHISA2|p.G240W|1|0.51|ENSG00000180730|chr13:26046683-26046683|C/A|missense_variant'] 125080 6211 VIEDDVRFEH True NCI_RA007_Epitope_Rep2 1257.59896550545 1257.5978699358602 28.767 2 -1.1704457995121058 0.3639750617810505 1.0 ['ENSG00000198756|ENST00000361927|COLGALT2'] 18588 8727 EKQRHWLEPNK True H1975_Epitope_Rep1 1463.7633454919498 1463.7622499358602 38.497 2 -1.1705676218089005 0.36399558443513386 1.0 ['nc|ENSG00000172159|A2A2Y4-5|FRMD3', 'nc|ENSG00000172159|A2A2Y4-2|FRMD3', 'ENSG00000172159|ENST00000304195|FRMD3'] 64348 10653 LPLHGVAD True PC9_epitope_Rep4 820.4443027873599 820.44320993586 48.726 2 -1.1706982857701975 0.36403547282465537 1.0 ['nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 79200 5118 PAPDHRLE True PC9_epitope_Rep6 933.46682913709 933.4657299358599 27.371 2 -1.170708778093937 0.36403547282465537 1.0 ['ENSG00000125845|ENST00000378827|BMP2'] 102254 17199 SLSHLSQGE True PC9_epitope_Rep4 956.4563240230399 956.45522993586 74.162 2 -1.170726031015372 0.36403547282465537 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 31697 17682 GEFWLGNDNI True PC9_epitope_Rep4 1163.5247379360299 1163.52364993586 76.038 2 -1.1707360020844253 0.36403547282465537 1.0 ['nc|ENSG00000160339|Q15485-2|FCN2', 'ENSG00000160339|ENST00000291744|FCN2', 'ENSG00000085265|ENST00000371806|FCN1'] 24734 10865 FAPPDIAP True PC9_epitope_Rep6 826.4225047136199 826.42140993586 52.65 2 -1.1707360513405995 0.36403547282465537 1.0 ['ENST00000517412.1_1_5:67522458-67569396:+|nuORF', 'ENSG00000145675|ENST00000521381|PIK3R1', 'nc|ENSG00000145675|P27986-4|PIK3R1'] 14831 11169 DVTRAIQDFRF True H1975_Epitope_Rep3 1366.6993482530595 1366.69824993586 48.059 2 -1.1707839345751887 0.36405599317645876 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 86332 11034 QIWVEKYYFRL True H1975_Epitope_Rep3 1543.8187351097497 1543.8170849037901 47.532 3 -1.170840591115264 0.3640639698965193 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 53132 12492 KPVTVMFDL True NCI_RA007_Epitope_Rep5 1048.56270366788 1048.5616099358601 54.707 2 -1.1708553837014224 0.36407194641647644 1.0 ['ENSG00000130150|ENST00000380492|MOSPD2', 'nc|ENSG00000130150|Q8NHP6-2|MOSPD2', 'MOSPD2|p.G142W|1|0.4|ENSG00000130150|chrX:14897185-14897185|G/T|missense_variant'] 132073 17408 VTTLLTTI True PC9_epitope_Rep5 860.5218844017201 860.5213349679301 71.96 1 -1.1708726259256872 0.36407419949580466 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 101340 12694 SLISKHGTL True PC9_epitope_Rep1 954.5498304850599 954.54872993586 53.699 2 -1.170873242027946 0.36407419949580466 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 126754 25984 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 105.12 3 -1.1709100042618117 0.36407419949580466 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 115373 3891 TRKDKEESKKK True PC9_epitope_Rep4 1375.7783268497494 1375.77667490379 21.148 3 -1.1709116891239006 0.36407419949580466 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 55937 4906 LARHGSAI True PC9_epitope_Rep2 823.46643521427 823.46532993586 24.237 2 -1.1709428424206663 0.36407419949580466 1.0 ['PLEKHG3|p.T658I|1|0.29|ENSG00000126822|chr14:64741490-64741490|C/T|missense_variant'] 65565 8995 LRRVLNLP True NCI_RA007_Epitope_Rep4 979.6290838652699 979.62798993586 41.433 2 -1.1709653788973695 0.36408217528721215 1.0 ['nc|ENSG00000135930|O60573-2|EIF4E2', 'ENSG00000135930|ENST00000258416|EIF4E2'] 62144 16072 LLEHLRIHTG True NCI_RA007_Epitope_Rep1 1187.6774906096698 1187.67638993586 66.62 2 -1.1710171072033726 0.3640901508785572 1.0 ['nc|ENSG00000197062|Q16670-2|ZSCAN26', 'nc|ENSG00000197062|Q16670|ZSCAN26', 'ENSG00000197062|ENST00000421553|ZSCAN26'] 142037 13709 YVLLASEQL True PC9_epitope_Rep1 1034.5648118428599 1034.56370993586 57.582 2 -1.1711001524972429 0.3641095100141716 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 59449 12656 LFPHYPVFL True PC9_epitope_Rep1 1131.6117024656298 1131.61006490379 53.55 3 -1.171190034295298 0.3641095100141716 1.0 ['ENST00000372491.3_1_9:131937866-131938148:-|nuORF'] 110474 13056 TFFEIYNGKL True PC9_epitope_Rep6 1230.6284747285797 1230.62683490379 61.823 3 -1.1712036470234386 0.3641095100141716 1.0 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 103201 21866 SPIQYITV True PC9_epitope_Rep3 919.5014833103099 919.50038993586 89.41 2 -1.171211835171464 0.3641095100141716 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549'] 98770 23279 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 96.01 3 -1.1712845400760161 0.36411748476259753 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 103427 20023 SPPPRVPPSL True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 81.845 2 -1.1713612713292736 0.3641630820552051 1.0 ['ENST00000392069.6_1_2:223163333-223163570:-|nuORF'] 85057 8191 QEIQQRQNEA True H1975_Epitope_Rep1 1242.59527710734 1242.5941899358602 36.447 2 -1.1713759355099786 0.36416648900816395 1.0 ['ENSG00000120051|ENST00000369704|CFAP58', 'CFAP58|p.V618Ffs*7|1|0.12|ENSG00000120051|chr10:104400713-104400713|C/-|frameshift_variant'] 75922 23222 NLRWILTFA True PC9_epitope_Rep5 1132.6393141958 1132.63820993586 94.306 2 -1.1713802538374913 0.36416648900816395 1.0 ['nc|ENSG00000069431|O60706|ABCC9', 'ENSG00000069431|ENST00000261200|ABCC9', 'ABCC9|p.S625Lfs*15|1|0.34|ENSG00000069431|chr12:21887854-21887863|AAAGGAAGCG/-|frameshift_variant', 'ABCC9|p.Y290*|1|0.14|ENSG00000069431|chr12:21913013-21913013|G/-|frameshift_variant'] 124657 11794 VGYAVHDNWI True PC9_epitope_Rep3 1172.5614577979197 1172.55982490379 50.381 3 -1.1714502782302154 0.3641949763615615 1.0 ['ENSG00000157184|ENST00000371486|CPT2'] 126075 6265 VLEHQQWHKD True PC9_epitope_Rep4 1318.64183337694 1318.64017490379 31.151 3 -1.1714651780932452 0.3641949763615615 1.0 ['ENSG00000023608|ENST00000216294|SNAPC1'] 23044 5154 EVHEKASFT True H1975_Epitope_Rep2 1046.50327421546 1046.5021699358601 24.902 2 -1.1715366055901595 0.36421548956661315 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 135043 10697 WDRRRWNFRQK True NCI_RA007_Epitope_Rep2 1646.8654595750597 1646.8643699358602 46.209 2 -1.1715552037434949 0.3642188949915983 1.0 ['ENST00000448841.5_1_10:104575113-104575296:+|nuORF'] 7618 15357 ASGDTLYIAT True PC9_epitope_Rep3 1010.49204082542 1010.49147496793 64.227 1 -1.1715829854543724 0.3642188949915983 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 135303 8762 WFWQDRFWLPP True PC9_epitope_Rep3 1576.7615545867998 1576.7599049037901 38.656 3 -1.171682912457814 0.3642644864383613 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 372 15929 AALAALALA True NCI_RA007_Epitope_Rep2 783.48543932335 783.48434993586 66.679 2 -1.1717139088119155 0.36427245824346693 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 110709 12345 TGETSMLKRPV True H1975_Epitope_Rep3 1217.64380752289 1217.64270993586 52.671 2 -1.171774849426455 0.36428042984865017 1.0 ['STEAP1|p.Q104Hfs*29|1|0.26|ENSG00000164647|chr7:90161032-90161038|ATATTTT/-|frameshift_variant', 'ENSG00000105889|ENST00000678116|STEAP1B', 'ENST00000483679.1_1_7:22532171-22534501:-|nuORF', 'ENST00000475789.1_1_7:89789075-89791404:+|nuORF', 'ENSG00000164647|ENST00000297205|STEAP1', 'nc|ENSG00000105889|Q6NZ63-2|STEAP1B'] 111536 11518 TIAERFLYRWW True H1975_Epitope_Rep3 1539.7986683715098 1539.79756993586 49.429 2 -1.1718323614377937 0.36430094043887146 1.0 ['ENSG00000148377|ENST00000277517|IDI2'] 91171 1117 RGAGSKRKRR True NCI_RA007_Epitope_Rep2 1170.71700443622 1170.71536490379 6.1031 3 -1.1718390565444696 0.36430658124051807 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 56358 14418 LDDLLQRLHHN True H1975_Epitope_Rep3 1372.7211463268 1372.72004993586 60.813 2 -1.1718733565147925 0.36430658124051807 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 61562 20966 LKILKLLLLK True PC9_epitope_Rep2 1193.8839015656101 1193.88280993586 86.096 2 -1.171905797474641 0.36430658124051807 1.0 ['ENST00000349215.7_1_11:18339453-18343686:-|nuORF', 'ENST00000396253.7_1_11:18333561-18343686:-|nuORF'] 7583 16199 ASEYPLSEP True H1975_Epitope_Rep2 991.44984166027 991.4492949679301 67.518 1 -1.1719153936515527 0.36430658124051807 1.0 ['ENST00000463209.1_1_10:81841489-81845995:+|nuORF', 'ENST00000483732.5_1_10:81841456-81850558:+|nuORF'] 55322 11218 LAEELRTSL True PC9_epitope_Rep3 1030.56587447202 1030.56476993586 48.159 2 -1.1719301248754794 0.36430658124051807 1.0 ['nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1', 'ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1'] 46352 4959 ISREQMILWD True PC9_epitope_Rep5 1289.6438075228898 1289.64217490379 24.11 3 -1.171954753914825 0.36430658124051807 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B', 'PDE3B|p.P839Lfs*47|1|0.83|ENSG00000152270|chr11:14844019-14844019|C/-|frameshift_variant', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 64270 9307 LPHQHHRAP True NCI_RA007_Epitope_Rep2 1091.57369424747 1091.5725899358602 40.808 2 -1.1719686827503153 0.36430658124051807 1.0 ['ENST00000369390.3_1:120839070-120839154:+|nuORF'] 76111 2044 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 11.224 3 -1.1719726752897182 0.36430998382627666 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 109279 14409 TAVDTAVYYC True PC9_epitope_Rep6 1104.47976188956 1104.4786699358601 67.321 2 -1.1720002008989585 0.36430998382627666 1.0 ['nc|ENSG00000211952|A0A0C4DH34|IGHV4-28'] 19242 12251 ELIVYLLEDR True NCI_RA007_Epitope_Rep2 1261.69180326113 1261.69070993586 52.255 2 -1.1720227824767435 0.3643133862413962 1.0 ['ENSG00000171612|ENST00000302692|SLC25A33'] 31719 9118 GEGPRERREGP True H1975_Epitope_Rep1 1238.6115958778198 1238.6104899358602 39.976 2 -1.1720307733183892 0.3643133862413962 1.0 ['ENST00000333602.10_1_3:195635568-195635940:-|nuORF'] 57368 12284 LEAKTCLIFFS True NCI_RA007_Epitope_Rep2 1270.6631459851399 1270.66204993586 52.385 2 -1.1721351063182228 0.3643293256271705 1.0 ['ENST00000309134.9_1_11:8969705-8969762:-|nuORF'] 25834 18684 FFFFFFFFKQF True PC9_epitope_Rep4 1597.7798304198893 1597.77817490379 79.949 3 -1.172137904557716 0.3643293256271705 1.0 ['ENST00000468830.1_1_7:131163282-131172484:+|nuORF'] 102788 1690 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 9.1938 2 -1.172177790800253 0.3643327273866984 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 474 8371 AALVHSDD True PC9_epitope_Rep5 826.38209645362 826.38098993586 37.141 2 -1.1721844994118036 0.3643327273866984 1.0 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL', 'nc|ENSG00000163138|Q8N7B6-4|PACRGL'] 120265 9290 VEDDDDDD True NCI_RA007_Epitope_Rep1 936.28322982764 936.28212993586 40.131 2 -1.1722654229233487 0.36434069653737183 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'nc|ENSG00000132950|Q9UJ78-2|ZMYM5', 'nc|ENSG00000132950|Q9UJ78-3|ZMYM5', 'ENST00000535942.5_1_13:20425681-20437631:-|nuORF', 'ENSG00000132950|ENST00000337963|ZMYM5'] 123444 9509 VGNQFKWNGK True NCI_RA007_Epitope_Rep3 1176.6039913162397 1176.60235490379 44.497 3 -1.1723370251450058 0.36434866548823447 1.0 ['ENSG00000171241|ENST00000303383|SHCBP1'] 20841 7236 EQISTAGTEAS True PC9_epitope_Rep5 1092.4934973773998 1092.49240993586 32.796 2 -1.1724002566417044 0.36435663423929393 1.0 ['ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000532107.2_1_14:51374946-51378571:-|nuORF'] 47557 7925 IVTSSLLG True PC9_epitope_Rep1 788.4643695256 788.46326993586 35.307 2 -1.1724444871083177 0.36435876867542366 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 104872 10899 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 48.563 2 -1.1725291710251826 0.36435876867542366 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 374 15357 AALAALALA True NCI_RA007_Epitope_Rep5 783.48543932335 783.48434993586 65.777 2 -1.172540130323857 0.36435876867542366 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 93435 15401 RQGGGQRP True NCI_RA007_Epitope_Rep3 854.4470967520199 854.44598993586 68.136 2 -1.1725462216355305 0.36435876867542366 1.0 ['nc|ENSG00000185100|Q8N142-2|ADSS1'] 51039 11282 KKKKKKKKQ True NCI_RA007_Epitope_Rep5 1170.8288463009799 1170.82720490379 50.039 3 -1.172559840035634 0.36435876867542366 1.0 ['ENSG00000147649|ENST00000336273|MTDH', 'LAPTM4B-MTDH|1|fusion', 'LAPTM4B-MTDH|3|fusion'] 34521 5756 GPQGEPRPP True PC9_epitope_Rep3 933.4668291370899 933.4657299358599 27.212 2 -1.1725885505946725 0.36435876867542366 1.0 ['COL5A1|p.G718R|1|0.82|ENSG00000130635|chr9:134767018-134767018|G/C|missense_variant'] 105242 12647 SRKFGSIPSP True PC9_epitope_Rep2 1074.5821932425 1074.58108993586 53.955 2 -1.1726680578467312 0.36435876867542366 1.0 ['ENST00000492897.3_1_17:46669706-46679621:+|nuORF', 'ENST00000474324.1_1_17:46673424-46679621:+|nuORF', 'ENST00000429755.8_1_17:46669689-46679621:+|nuORF', 'ENST00000481995.5_1_17:46673424-46679621:+|nuORF'] 10882 9006 CYCLTVQRKY True PC9_epitope_Rep5 1275.61039921963 1275.60874490379 39.587 3 -1.1726775299844514 0.36435876867542366 1.0 ['ENST00000505658.5_1_17:48828064-48828295:+|nuORF'] 133390 19291 VVVKRQETV True PC9_epitope_Rep6 1056.62914343492 1056.6280499358602 86.851 2 -1.1727390765838364 0.36435876867542366 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 63832 11709 LNKHLTTHQ True PC9_epitope_Rep4 1090.5883412521002 1090.5872499358602 52.801 2 -1.172754401264225 0.36435876867542366 1.0 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A'] 23518 11878 EVVLPLLKG True H1975_Epitope_Rep1 966.6113681124599 966.61026993586 50.688 2 -1.1727621481656743 0.36435876867542366 1.0 ['ENST00000466602.1_1_2:219677084-219677513:+|nuORF'] 93627 4071 RQQIEYKTL True NCI_RA007_Epitope_Rep3 1177.64552177505 1177.64386490379 22.512 3 -1.1727992157553633 0.36435876867542366 1.0 ['PLXNA2|p.Y1854Lfs*6|1|0.42|ENSG00000076356|chr1:208028034-208028038|GAGTA/-|frameshift_variant', 'ENSG00000076356|ENST00000367033|PLXNA2'] 376 15724 AALAALALA True NCI_RA007_Epitope_Rep5 783.48543932335 783.48434993586 67.2 2 -1.1728226201834622 0.36435876867542366 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 130424 15393 VSLVSSKN True NCI_RA007_Epitope_Rep3 832.46543215476 832.46432993586 68.104 2 -1.1728299513972065 0.36435876867542366 1.0 ['IMMP2L|p.P82S|1|0.13|ENSG00000184903|chr7:110963561-110963561|G/A|missense_variant'] 85570 6969 QGEVTVASIDD True PC9_epitope_Rep4 1132.52479750568 1132.52370993586 34.046 2 -1.1728679445001684 0.36435876867542366 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 10843 22789 CTSEACCCCC True PC9_epitope_Rep2 1024.2250871373199 1024.2239899358601 93.147 2 -1.1728809088685195 0.36435876867542366 1.0 ['ENST00000431629.5_2_7:114654517-114655986:+|nuORF', 'ENSG00000135272|ENST00000393486|MDFIC', 'nc|ENSG00000135272|Q9P1T7-1|MDFIC'] 135302 8379 WFWQDRFWLPP True PC9_epitope_Rep3 1576.7615545867998 1576.7599049037901 37.197 3 -1.1729132784211194 0.36436673560193017 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 129609 24909 VRPAIPGGG True NCI_RA007_Epitope_Rep5 822.4711862415398 822.47008993586 103.31 2 -1.1729898049438223 0.36437470232872937 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 58232 9582 LELIPTLP True H1975_Epitope_Rep2 894.5426198463 894.54152993586 41.832 2 -1.1730355806103296 0.3643769347420135 1.0 ['ENSG00000092020|ENST00000261475|PPP2R3C', 'nc|ENSG00000092020|Q969Q6-2|PPP2R3C', 'ENST00000557773.5_1_14:35568434-35591165:-|nuORF', 'ENST00000554265.5_1_14:35568434-35579030:-|nuORF'] 142150 20382 YVRYLGYV True PC9_epitope_Rep6 1031.5440168286298 1031.54347496793 91.099 1 -1.1730461098827731 0.3643769347420135 1.0 ['TRIO|p.D1987Y|1|0.62|ENSG00000038382|chr5:14472638-14472638|G/T|missense_variant'] 30768 19000 GALRTTAWKP True PC9_epitope_Rep2 1099.61382772395 1099.6127299358602 78.45 2 -1.173069667017685 0.3643769347420135 1.0 ['ENST00000560589.5_1_15:70352876-70358370:-|nuORF'] 82002 11078 PLVAHVAS True PC9_epitope_Rep3 792.4493881678 792.44828993586 47.61 2 -1.173087889006789 0.3643769347420135 1.0 ['ENST00000393800.6_2_11:68382148-68382592:+|nuORF'] 60859 4903 LHVVGAPG True NCI_RA007_Epitope_Rep1 748.42317341996 748.42206993586 23.151 2 -1.1731477006093485 0.3643769347420135 1.0 ['ENSG00000139531|ENST00000266971|SUOX'] 43578 7068 IGSLDVEKV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 32.116 2 -1.1731586168787118 0.36438490074192903 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant'] 42027 11491 IDHFFCDFP True PC9_epitope_Rep3 1139.4746169394698 1139.4735099358602 49.202 2 -1.1732124484527948 0.3643928665421779 1.0 ['OR2L13|p.V180F|1|0.31|ENSG00000196071|chr1:248099913-248099913|G/T|missense_variant'] 101393 19904 SLKKRKNCL True PC9_epitope_Rep4 1088.64883333368 1088.64772993586 84.695 2 -1.1732362149646516 0.36439966414777497 1.0 ['ENST00000496445.5_1_10:114207222-114224375:+|nuORF'] 25894 5377 FFLLIIRKLL True PC9_epitope_Rep3 1274.8478504100597 1274.84674993586 25.756 2 -1.1732411274480083 0.36439966414777497 1.0 ['nc|ENSG00000068878|Q14997-3|PSME4'] 68827 15253 LTLSQKRPYVD True NCI_RA007_Epitope_Rep1 1318.7245003717399 1318.7234099358602 63.405 2 -1.173249141718054 0.36439966414777497 1.0 ['nc|ENSG00000171056|Q9BT81-2|SOX7', 'ENSG00000171056|ENST00000304501|SOX7'] 68751 7695 LTLEADLQGL True NCI_RA007_Epitope_Rep1 1071.5811901829898 1071.58008993586 33.926 2 -1.1732667338789646 0.36439966414777497 1.0 ['KRT20|p.V169L|1|0.39|ENSG00000171431|chr17:40880739-40880739|C/A|missense_variant'] 64135 10148 LPERRRQGCS True PC9_epitope_Rep5 1200.6145730832798 1200.6134699358602 44.021 2 -1.1733514761636825 0.3644076292638913 1.0 ['ENST00000369239.9_1_6:99864293-99873181:-|nuORF', 'ENST00000438806.5_1_6:99862543-99873181:-|nuORF'] 54105 13192 KVLPALVIP True H1975_Epitope_Rep1 948.6371889374799 948.63608993586 55.84 2 -1.1734894807943126 0.3644281256657352 1.0 ['FAM171A1|p.S820*|1|0.11|ENSG00000148468|chr10:15213129-15213129|G/-|frameshift_variant', 'ENSG00000148468|ENST00000378116|FAM171A1'] 80689 14427 PGVTFKLLL True NCI_RA007_Epitope_Rep3 986.6164534928998 986.61534993586 64.059 2 -1.173571673120034 0.3644486215538847 1.0 ['ENST00000361246.6_1_14:103432671-103433458:-|nuORF'] 3851 14539 AGVSHHAWLI True PC9_epitope_Rep4 1089.57196291197 1089.5708699358602 63.838 2 -1.173671979826533 0.36450671044222505 1.0 ['ENST00000295549.8_1_2:177494902-177497775:-|nuORF'] 28031 9751 FQQHLARYL True PC9_epitope_Rep4 1174.6247267608198 1174.62307490379 45.145 3 -1.1737484311879915 0.3645397358462194 1.0 ['VCPIP1|p.Q254L|1|0.09|ENSG00000175073|chr8:66666198-66666198|T/A|missense_variant'] 65141 10317 LQNRRLFQSLH True NCI_RA007_Epitope_Rep5 1410.7844152896998 1410.7833099358602 46.315 2 -1.1737602158329008 0.36454769870806863 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 110853 5612 TGRFEEDFIEK True H1975_Epitope_Rep2 1369.6513950011297 1369.6497449037902 26.588 3 -1.1738232709175906 0.3645556613703574 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 76070 25619 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 107.75 3 -1.1739047634277677 0.36458411648246997 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 100232 4735 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 24.768 2 -1.1739191176662491 0.36458411648246997 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 34515 10708 GPPTLTALP True NCI_RA007_Epitope_Rep3 865.4909186266099 865.49037496793 49.165 1 -1.1739362597583558 0.3645920783891137 1.0 ['ENSG00000146700|ENST00000275560|SSC4D', 'SSC4D|p.Q322Sfs*99|1|0.4|ENSG00000146700|chr7:76393887-76393887|G/-|frameshift_variant'] 67465 5455 LSSSGGAVR True NCI_RA007_Epitope_Rep2 832.44028003608 832.43918993586 25.838 2 -1.174099543937648 0.36462510024057737 1.0 ['ENST00000316715.8_1_X:13789363-13789450:-|nuORF'] 19266 5383 ELKGLKPG True NCI_RA007_Epitope_Rep5 840.5069030439199 840.50580993586 27.394 2 -1.1742461871360097 0.364658121264519 1.0 ['ENSG00000177363|ENST00000317449|LRRN4CL', 'LRRN4CL|p.R137T|1|0.37|ENSG00000177363|chr11:62688099-62688099|C/G|missense_variant'] 56078 8262 LATKMEYFYWR True NCI_RA007_Epitope_Rep1 1506.7329568804598 1506.73184993586 36.136 2 -1.1743189212747303 0.36466608194461847 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 102771 10029 SNIPLQSVI True PC9_epitope_Rep1 969.5494961318899 969.54838993586 43.444 2 -1.1743779228029125 0.36467286440975266 1.0 ['ENSG00000204186|ENST00000374423|ZDBF2'] 76110 1983 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 10.887 3 -1.1744403502599154 0.36467286440975266 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 20679 6012 EQDLVWKFRYY True NCI_RA007_Epitope_Rep1 1545.76161415645 1545.7599749037902 27.43 3 -1.174478665553938 0.36467286440975266 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 129828 10626 VRRLVKILLLG True NCI_RA007_Epitope_Rep2 1278.8863611770998 1278.8847149037902 45.932 3 -1.174486989795074 0.36467286440975266 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 10464 18908 CILPEGKG True H1975_Epitope_Rep2 815.4211248146299 815.4205749679301 78.494 1 -1.1747324654433822 0.36468185861217944 1.0 ['THSD7A|p.V979G|1|0.28|ENSG00000005108|chr7:11446189-11446189|A/C|missense_variant'] 107994 13285 SWMPMFQRRRR True H1975_Epitope_Rep1 1549.7870752253298 1549.78596993586 56.202 2 -1.1747746072769896 0.36468185861217944 1.0 ['ENSG00000105697|ENST00000222304|HAMP'] 23333 12320 EVRDNGECIK True H1975_Epitope_Rep1 1161.5448217576097 1161.54372993586 52.416 2 -1.1747938254775308 0.36468185861217944 1.0 ['PMS1|p.G60C|1|0.07|ENSG00000064933|chr2:189795814-189795814|G/T|missense_variant'] 26365 6779 FHTIIEFPLER True PC9_epitope_Rep2 1400.7452358163198 1400.7436049037901 31.48 3 -1.1748381178914773 0.36468185861217944 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32', 'ENST00000534357.1_1_11:128850446-128851410:-|nuORF'] 33672 17096 GLGRPCRGIP True PC9_epitope_Rep4 1024.5600183292797 1024.55892993586 73.759 2 -1.174889553789507 0.36468185861217944 1.0 ['nc|ENSG00000185252|Q16587-5|ZNF74', 'ENST00000493734.5_1_22:20749431-20759943:+|nuORF'] 93844 22976 RRCWRLYLTQA True PC9_epitope_Rep6 1464.77722173428 1464.7761299358601 101.48 2 -1.1749142213491808 0.36468185861217944 1.0 ['nc|ENSG00000150676|Q8IWF9-2|CCDC83'] 66510 11047 LSHLEEEQP True PC9_epitope_Rep2 1080.50875351872 1080.5076499358602 47.812 2 -1.174938189037194 0.36468185861217944 1.0 ['ENSG00000099308|ENST00000687212|MAST3', 'ENST00000608648.1_1_19:18220994-18239762:+|nuORF', 'nc|ENSG00000099308|O60307|MAST3'] 109277 17021 TAVDTAVYYC True PC9_epitope_Rep3 1104.47976188956 1104.4786699358601 70.626 2 -1.1749504105425483 0.36468185861217944 1.0 ['nc|ENSG00000211952|A0A0C4DH34|IGHV4-28'] 14492 2784 DTHLWYFVIP True H1975_Epitope_Rep2 1289.6444591458899 1289.64280490379 14.74 3 -1.174962164595374 0.36468185861217944 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 66523 19210 LSHNRLRT True PC9_epitope_Rep5 995.56246085743 995.56136993586 78.931 2 -1.1749982967012738 0.36468524898214844 1.0 ['ENST00000559551.5_1_14:24734823-24737113:-|nuORF', 'ENST00000558649.5_1_14:24735828-24737454:-|nuORF', 'ENSG00000100949|ENST00000216840|RABGGTA'] 107902 6190 SVVRFDKDERE True H1975_Epitope_Rep1 1378.6840921117398 1378.6829899358602 28.879 2 -1.1750170611617985 0.36468524898214844 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant'] 46056 15659 ISGNPVTLT True PC9_epitope_Rep1 900.4916469026001 900.49109496793 65.052 1 -1.1750217205484799 0.3646886391822316 1.0 ['FCRL5|p.H721Qfs*8|1|0.22|ENSG00000143297|chr1:157524355-157524356|-/T|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.G523Efs*9|1|0.09|ENSG00000143297|chr1:157534727-157534727|C/-|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-4|FCRL5', 'ENST00000481082.1_1_1:157512505-157514867:-|nuORF'] 112443 9991 TLDDLQYMIFH True H1975_Epitope_Rep1 1394.65403785342 1394.65294993586 43.366 2 -1.1750312740278095 0.3646886391822316 1.0 ['nc|ENSG00000134240|P54868-3|HMGCS2', 'nc|ENSG00000134240|P54868-2|HMGCS2', 'ENSG00000134240|ENST00000369406|HMGCS2'] 16051 7510 EDWRRPLEEDW True NCI_RA007_Epitope_Rep1 1529.6899057681699 1529.68825490379 33.205 3 -1.175109136012813 0.3647296095403926 1.0 ['RBM12B|p.P862Lfs*25|1|0.11|ENSG00000183808|chr8:93733826-93733826|G/-|frameshift_variant', 'ENSG00000183808|ENST00000520560|RBM12B'] 12924 22916 DLKLRKFIF True H1975_Epitope_Rep1 1178.7175645165 1178.71646993586 95.296 2 -1.1751604946019212 0.3647296095403926 1.0 ['ENSG00000071575|ENST00000155926|TRIB2'] 86813 18953 QLPLRVLIV True PC9_epitope_Rep6 1049.6961007959299 1049.69500993586 85.549 2 -1.1751917299514982 0.3647375673305775 1.0 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000470184.1_1_7:100179334-100179876:-|nuORF'] 120808 12127 VELKPHDVR True PC9_epitope_Rep2 1091.60874234351 1091.60764993586 51.956 2 -1.1752189570383391 0.36474434451486837 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 58622 8917 LEQVTKVL True NCI_RA007_Epitope_Rep4 928.5593325396 928.55822993586 41.13 2 -1.1753049889866456 0.36474434451486837 1.0 ['ENSG00000086544|ENST00000263370|ITPKC'] 74483 9493 NFAETVKV True H1975_Epitope_Rep2 906.4810822188999 906.47998993586 41.483 2 -1.1753124981148608 0.36474434451486837 1.0 ['nc|ENSG00000119509|Q9Y283-2|INVS', 'INVS|p.R914Lfs*31|1|0.05|ENSG00000119509|chr9:100292997-100292998|-/TTGGT|frameshift_variant', 'ENSG00000119509|ENST00000262457|INVS'] 100797 8132 SLEGSRWP True PC9_epitope_Rep1 930.45593010022 930.45482993586 36.108 2 -1.175348480500657 0.36474434451486837 1.0 ['ENSG00000183397|ENST00000329493|TEKTIP1'] 136560 16086 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 68.604 2 -1.175508694319278 0.3648024049602305 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 61453 7563 LIYISHLHSDH True NCI_RA007_Epitope_Rep2 1333.6778845324902 1333.6767899358601 34.044 2 -1.1755743890504249 0.3648103612405431 1.0 ['nc|ENSG00000168405|Q9Y471|CMAHP', 'nc|ENSG00000168405|Q9Y471-4|CMAHP'] 62210 13151 LLESQTAP True PC9_epitope_Rep5 857.4494477374499 857.44834993586 55.589 2 -1.1755916943607874 0.36483084284229117 1.0 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3', 'nc|ENSG00000147130|Q14202-3|ZMYM3', 'ENST00000489332.1_1_X:70467340-70473105:-|nuORF'] 79665 12923 PDRIGRLY True NCI_RA007_Epitope_Rep5 988.5454138109599 988.54430993586 56.39 2 -1.175626358951148 0.3648387985670984 1.0 ['ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF'] 20345 5284 ENWRIFREEQN True PC9_epitope_Rep3 1519.71678922235 1519.7151449037901 25.404 3 -1.1756920722523811 0.36485927929959044 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 109402 16356 TDEAWSRHCC True H1975_Epitope_Rep1 1206.45462685422 1206.4535299358602 68.272 2 -1.175760832908995 0.36487518943901004 1.0 ['ENST00000370069.5_1_20:62220735-62220903:-|nuORF'] 94953 23269 RTKRHKNNR True PC9_epitope_Rep4 1208.6962689916397 1208.69461490379 97.756 3 -1.1757793040782916 0.36487518943901004 1.0 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 91220 7966 RGEDAFCDP True H1975_Epitope_Rep2 1008.3970948947599 1008.39598993586 35.59 2 -1.1758041981798006 0.3648956689461687 1.0 ['ENSG00000118193|ENST00000367350|KIF14'] 25833 19396 FFFFFFFFKQF True PC9_epitope_Rep2 1597.7798304198893 1597.77817490379 79.985 3 -1.175883573014995 0.36490362336084564 1.0 ['ENST00000468830.1_1_7:131163282-131172484:+|nuORF'] 36778 12950 GVKVQELWQP True PC9_epitope_Rep3 1182.6397081186196 1182.63805490379 54.836 3 -1.1760137844197986 0.36493662642152197 1.0 ['ENST00000479002.1_1_2:27457475-27458610:+|nuORF'] 60437 14169 LGVKMGKP True PC9_epitope_Rep6 828.4891448047998 828.48804993586 66.373 2 -1.1760559513144153 0.36495710438975515 1.0 ['LEMD2|p.W230G|1|0.26|ENSG00000161904|chr6:33788429-33788429|A/C|missense_variant'] 14268 7160 DSSNYEQESKI True NCI_RA007_Epitope_Rep3 1298.5626395663796 1298.56154993586 35.281 2 -1.1760809047540868 0.3649650577361421 1.0 ['ENSG00000198822|ENST00000361669|GRM3', 'GRM3|p.C585Vfs*11|1|0.31|ENSG00000198822|chr7:86839265-86839265|C/-|frameshift_variant', 'nc|ENSG00000198822|Q14832-2|GRM3'] 46464 10445 ISVAKVNCVK True PC9_epitope_Rep4 1059.61105084263 1059.6099499358602 47.888 2 -1.176099336730686 0.36497301088331435 1.0 ['ENSG00000087301|ENST00000281741|TXNDC16'] 56035 17290 LASQKGSV True H1975_Epitope_Rep3 788.43921740692 788.43812993586 72.154 2 -1.1761337223902562 0.3649809638312794 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'ZMYM2|p.P246Hfs*3|1|0.13|ENSG00000121741|chr13:19993806-19993806|C/-|frameshift_variant', 'nc|ENSG00000121741|Q9UBW7-2|ZMYM2', 'ENST00000382881.7_1_13:20532931-20593821:+|nuORF'] 104569 4650 SQQPIYSKQ True NCI_RA007_Epitope_Rep2 1077.5454733806098 1077.54436993586 22.713 2 -1.1762557381282606 0.3650093926111459 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'ENST00000469521.5_1_21:45509650-45516542:+|nuORF', 'ENST00000483973.5_1_21:45509395-45516542:+|nuORF'] 12796 9896 DLFDSTRDP True PC9_epitope_Rep3 1064.47745339044 1064.47634993586 43.021 2 -1.176257518372106 0.3650093926111459 1.0 ['nc|ENSG00000116852|O75037-3|KIF21B', 'ENSG00000116852|ENST00000461742|KIF21B', 'nc|ENSG00000116852|O75037-2|KIF21B', 'nc|ENSG00000116852|O75037|KIF21B'] 3574 5912 AGLYFLMWFQR True NCI_RA007_Epitope_Rep5 1430.7169128935 1430.71580993586 29.426 2 -1.1762668558840343 0.36501277363121776 1.0 ['ENST00000411991.5_1_2:103340290-103347510:-|nuORF'] 102675 8584 SLYLSSAEHPG True NCI_RA007_Epitope_Rep2 1159.5509526838698 1159.54984993586 38.033 2 -1.176273568053571 0.36501277363121776 1.0 ['nc|ENSG00000187098|O75030-8|MITF', 'nc|ENSG00000187098|O75030-7|MITF'] 60967 10641 LIDRQVTV True PC9_epitope_Rep2 942.5498304850599 942.54872993586 46.244 2 -1.1762897085348263 0.36502072558325926 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 93972 13736 RRIKTRTAST True NCI_RA007_Epitope_Rep5 1188.7051023398399 1188.7034549037899 59.52 3 -1.1763921274941747 0.3650537230445563 1.0 ['ENSG00000142599|ENST00000400908|RERE', 'RERE|p.E524Rfs*49|1|0.28|ENSG00000142599|chr1:8364226-8364226|C/-|frameshift_variant'] 62018 6854 LLDQHMLKVHY True H1975_Epitope_Rep3 1395.73329123363 1395.73218993586 31.322 2 -1.1764307416757451 0.36506505378363824 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A'] 115908 24755 TSFLSMWLS True H1975_Epitope_Rep1 1070.5106680950198 1070.50956993586 102.54 2 -1.176484470562054 0.36506505378363824 1.0 ['nc|ENSG00000158296|Q8WWT9-2|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-4|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-3|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-5|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-6|SLC13A3', 'ENSG00000158296|ENST00000279027|SLC13A3'] 121760 22439 VFMVVILP True PC9_epitope_Rep3 916.5455970517598 916.54448993586 91.587 2 -1.1764940852543744 0.36506505378363824 1.0 ['ENSG00000165548|ENST00000298351|TMEM63C'] 22425 9669 ETERECRGL True H1975_Epitope_Rep2 1091.5029569456299 1091.50184993586 42.173 2 -1.176623723771134 0.36513561571789926 1.0 ['ENST00000539759.5_1_11:47639025-47663996:-|nuORF'] 44208 15424 IKEDELRESIE True NCI_RA007_Epitope_Rep2 1359.68817443267 1359.68706993586 64.697 2 -1.17664642702497 0.3651536968634571 1.0 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 94480 23744 RRRRRRLLFW True PC9_epitope_Rep1 1513.9330856424099 1513.9319899358602 96.124 2 -1.1766864769117764 0.3651536968634571 1.0 ['nc|ENSG00000100918|O95072-2|REC8', 'ENSG00000100918|ENST00000611366|REC8'] 29242 18624 FTVTEQKV True PC9_epitope_Rep4 950.5072969667399 950.50618993586 79.714 2 -1.1766917534150798 0.3651536968634571 1.0 ['ENST00000498374.1_1_6:16739996-16761588:-|nuORF'] 78971 4755 PAIIQNGYSD True H1975_Epitope_Rep3 1076.51383889916 1076.51274993586 23.416 2 -1.1767421042499704 0.3651536968634571 1.0 ['ENST00000352433.9_1_5:159848878-159849339:+|nuORF'] 119006 5343 VAEVEPQSQPQ True H1975_Epitope_Rep3 1210.5829810881398 1210.58188993586 25.622 2 -1.1767653503130322 0.3651536968634571 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 117764 21480 TVVMMTRLE True PC9_epitope_Rep3 1078.5514873611799 1078.55038993586 87.914 2 -1.17678424539561 0.3651536968634571 1.0 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 57653 22495 LEEELVWPLLR True PC9_epitope_Rep5 1395.7762015914298 1395.7751099358602 91.53 2 -1.1767972181736146 0.3651536968634571 1.0 ['ENSG00000261308|ENST00000618634|FIGNL2'] 42579 9201 IEFSREEWEHL True NCI_RA007_Epitope_Rep1 1473.6888431390098 1473.68719490379 39.791 3 -1.176808195218568 0.3651616457566424 1.0 ['ENSG00000197302|ENST00000316491|KRBOX5', 'ENST00000529943.6_1_16:31724760-31765604:+|nuORF', 'ENST00000534277.5_1_16:31724760-31767037:+|nuORF'] 81527 11235 PLHSTLSV True PC9_epitope_Rep4 852.4705175352001 852.46942993586 50.991 2 -1.176816192923991 0.3651695944507744 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 119290 9902 VALQQYPP True PC9_epitope_Rep2 914.48616759934 914.48506993586 43.419 2 -1.1768542090923781 0.36517297073958604 1.0 ['ENST00000481001.5_1_3:49053397-49053514:-|nuORF', 'ENST00000460505.5_1_3:49053078-49053514:-|nuORF'] 93868 8684 RRELWFWWRGW True NCI_RA007_Epitope_Rep1 1676.8476842525997 1676.84602490379 37.78 3 -1.1768727860117956 0.36517297073958604 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 13415 13266 DLYYVRFTEWL True NCI_RA007_Epitope_Rep2 1503.7398160827097 1503.73870993586 56.237 2 -1.1769338652721766 0.3651874569693935 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 3827 15222 AGVLPDIEQF True PC9_epitope_Rep2 1087.5549754351498 1087.5538699358601 63.817 2 -1.176969988277132 0.3651874569693935 1.0 ['nc|ENSG00000169682|Q9H2V7-5|SPNS1', 'ENST00000568900.5_1_16:28986322-28990816:+|nuORF', 'ENST00000569969.5_2_16:28986191-28992937:+|nuORF', 'nc|ENSG00000169682|Q9H2V7-4|SPNS1', 'nc|ENSG00000169682|Q9H2V7-2|SPNS1', 'ENSG00000169682|ENST00000311008|SPNS1'] 15927 7570 EDLRKELYELW True PC9_epitope_Rep6 1492.75619442284 1492.75453490379 38.391 3 -1.1770050112020978 0.3651874569693935 1.0 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'ENST00000609477.5_1_6:125555503-125614049:-|nuORF', 'ENST00000608461.1_1_6:125598188-125614049:-|nuORF'] 6560 11906 APVAAPVAA True PC9_epitope_Rep4 765.43848913093 765.43738993586 53.576 2 -1.1770078447824661 0.3651874569693935 1.0 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 32996 18096 GIGFRQPK True NCI_RA007_Epitope_Rep1 901.51338540669 901.5128349679301 74.531 1 -1.1770948147010105 0.3651874569693935 1.0 ['ENST00000310483.10_2_1:153936131-153940173:-|nuORF'] 12911 16808 DLKHWKPV True PC9_epitope_Rep1 1021.5709002828098 1021.56980993586 69.477 2 -1.1771098626477379 0.3651874569693935 1.0 ['nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 100118 7557 SISPGSPPY True NCI_RA007_Epitope_Rep2 903.43379767331 903.43270993586 34.02 2 -1.1771205772831699 0.3651874569693935 1.0 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2'] 19647 10138 ELRAFLRHYEA True H1975_Epitope_Rep3 1403.73098273451 1403.72988993586 44.04 2 -1.1771276507164108 0.3651874569693935 1.0 ['ENSG00000184261|ENST00000327876|KCNK12'] 72706 10345 MMNKVFGG True NCI_RA007_Epitope_Rep1 882.4091802319399 882.40808993586 44.229 2 -1.177127826451879 0.3651874569693935 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS', 'GMPS|p.M107V|1|0.2|ENSG00000163655|chr3:155898036-155898036|A/G|missense_variant', 'GMPS|p.M107I|1|0.26|ENSG00000163655|chr3:155898038-155898038|G/T|missense_variant'] 64958 14320 LQEREKQL True PC9_epitope_Rep5 1042.5771078620598 1042.5760099358602 60.084 2 -1.1771480821458908 0.3651874569693935 1.0 ['PHF14|p.V560Ffs*61|1|0.26|ENSG00000106443|chr7:11036491-11036491|G/-|frameshift_variant', 'nc|ENSG00000106443|O94880-2|PHF14', 'ENST00000490957.5_1_7:11013950-11101713:+|nuORF', 'nc|ENSG00000106443|O94880-1|PHF14', 'ENSG00000106443|ENST00000634607|PHF14', 'ENST00000497851.1_1_7:11075344-11076425:+|nuORF'] 20234 20925 ENLLLEGKA True PC9_epitope_Rep4 985.54441075145 985.54330993586 88.647 2 -1.1771572845540892 0.3651874569693935 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'ENST00000489156.1_1_6:152599163-152623219:-|nuORF'] 110682 6230 TGAYHTRKAK True NCI_RA007_Epitope_Rep3 1131.61489035311 1131.61378993586 31.509 2 -1.177170026449331 0.3651874569693935 1.0 ['ENST00000368655.4_1_1:153782348-153782624:-|nuORF'] 18268 12454 EIQVGNIIPLF True NCI_RA007_Epitope_Rep1 1241.70197402201 1241.70147496793 52.421 1 -1.1771977296459621 0.3651874569693935 1.0 ['ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 45498 23677 IQNGRFRREFV True PC9_epitope_Rep5 1420.76876522556 1420.76710490379 96.052 3 -1.1772072821089503 0.3651874569693935 1.0 ['ENST00000444316.2_2_4:102791758-102816466:+|nuORF'] 88456 19026 QSRLATLKIE True NCI_RA007_Epitope_Rep1 1157.67682190333 1157.67572993586 78.148 2 -1.177237703887399 0.3651874569693935 1.0 ['nc|ENSG00000196220|O43295-2|SRGAP3', 'ENSG00000196220|ENST00000383836|SRGAP3', 'ENST00000485983.6_1_3:9079745-9122942:-|nuORF', 'nc|ENSG00000196220|O43295-3|SRGAP3', 'ENST00000537556.1_1_12:64238596-64474299:+|nuORF', 'nc|ENSG00000196935|Q7Z6B7-2|SRGAP1', 'ENSG00000196935|ENST00000355086|SRGAP1'] 29750 17596 FVNLKTVL True PC9_epitope_Rep6 932.5695033004799 932.56840993586 80.325 2 -1.177256910906322 0.3651874569693935 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B'] 101995 20701 SLQPASEDTL True PC9_epitope_Rep3 1059.50841916555 1059.50732993586 84.9 2 -1.1772694833389505 0.36519540344991613 1.0 ['ENST00000448467.1_1_22:30939341-30940067:+|nuORF'] 90503 11948 RELFQYQYPER True H1975_Epitope_Rep1 1527.74702672147 1527.7459299358602 50.962 2 -1.1773168120408384 0.36519877828960545 1.0 ['ENST00000306077.4_1_3:14166653-14170952:+|nuORF'] 101450 6724 SLKYECRPEYY True NCI_RA007_Epitope_Rep2 1449.6598515098501 1449.6587499358602 30.769 2 -1.17735295737953 0.36519877828960545 1.0 ['ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF', 'nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1'] 112407 11654 TLCHLPLQLHR True NCI_RA007_Epitope_Rep1 1329.73395993997 1329.7328699358602 49.304 2 -1.1774199099439617 0.3652009562790232 1.0 ['ENST00000471308.5_1_3:51992122-51994256:-|nuORF'] 111510 7567 TIACIFFPL True PC9_epitope_Rep1 1023.54632532775 1023.54522993586 33.924 2 -1.1774248469999014 0.3652009562790232 1.0 ['ENST00000520096.5_1_8:94359025-94433012:-|nuORF'] 27763 19328 FPTVEMVI True PC9_epitope_Rep6 934.4833907180199 934.48228993586 86.994 2 -1.1774257140628581 0.3652009562790232 1.0 ['nc|ENSG00000185437|P55822|SH3BGR'] 112770 21075 TLHRAPAR True H1975_Epitope_Rep1 920.5304324531598 920.52932993586 87.539 2 -1.1774399983032453 0.3652009562790232 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A'] 16631 11781 EEQELHDI True H1975_Epitope_Rep2 1011.4509042894299 1011.44980993586 50.39 2 -1.1774468878489317 0.3652009562790232 1.0 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A', 'ENST00000507080.5_1_4:176556058-176562011:-|nuORF'] 12343 7574 DIREKHRLWHA True PC9_epitope_Rep6 1459.77966426243 1459.77802490379 38.407 3 -1.1774568075454341 0.3652043306840228 1.0 ['INSM2|p.A504Gfs*37|1|0.33|ENSG00000168348|chr14:35535763-35535763|C/-|frameshift_variant', 'ENSG00000168348|ENST00000307169|INSM2'] 42383 16624 IEDDIESLHT True H1975_Epitope_Rep2 1170.54044756982 1170.5393499358602 69.176 2 -1.1774597575571502 0.3652043306840228 1.0 ['ENSG00000156140|ENST00000286657|ADAMTS3', 'ENST00000511274.1_1_4:73163985-73176842:-|nuORF'] 75326 11772 NINWLRDVTI True H1975_Epitope_Rep1 1242.67207087606 1242.67096993586 50.273 2 -1.1775367981703875 0.36523273714907944 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant'] 117021 9650 TVHTVLKSP True PC9_epitope_Rep3 980.5654805492 980.56438993586 42.067 2 -1.1776493322978436 0.36523273714907944 1.0 ['ENSG00000101544|ENST00000262198|ADNP2'] 95077 7792 RTWWRWLTFWR True NCI_RA007_Epitope_Rep4 1692.8789843808795 1692.87733490379 36.655 3 -1.1777055804643632 0.3652531978272297 1.0 ['nc|ENSG00000164284|Q8TAA5-2|GRPEL2'] 117579 13084 TVSPQFLIDKN True H1975_Epitope_Rep3 1260.6714021697198 1260.6703099358601 55.57 2 -1.177726317955549 0.36526114219201744 1.0 ['ENST00000588919.5_1_19:1105807-1106568:+|nuORF'] 52527 20551 KLEEALYEYQP True H1975_Epitope_Rep3 1381.6765471198098 1381.6754499358601 85.899 2 -1.1777416649070913 0.365263315979175 1.0 ['ENST00000554641.1_1_14:61278722-61346563:+|nuORF', 'nc|ENSG00000020426|P51948-2|MNAT1', 'ENSG00000020426|ENST00000261245|MNAT1', 'ENST00000553946.1_1_14:61346446-61449280:+|nuORF'] 15654 9734 EATEELRR True H1975_Epitope_Rep3 1002.5094222250599 1002.50832993586 42.463 2 -1.1777718230313075 0.365263315979175 1.0 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000477225.1_1_3:49160862-49161360:-|nuORF'] 139259 16292 YLIKDIRFL True PC9_epitope_Rep1 1179.7015800991899 1179.6999449037899 67.485 3 -1.1777823974032569 0.365263315979175 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000466614.1_1_22:30983271-30987820:-|nuORF'] 83530 17697 PTTLVDKV True PC9_epitope_Rep6 871.5014833103099 871.5009349679301 80.707 1 -1.1777844771761936 0.365263315979175 1.0 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 59792 16859 LGELLSKLT True PC9_epitope_Rep5 972.58554728744 972.58444993586 69.858 2 -1.177805634010117 0.365263315979175 1.0 ['ENST00000460601.5_1_20:57569750-57570100:+|nuORF'] 81525 9609 PLHPGRKD True PC9_epitope_Rep4 918.50354899898 918.50244993586 44.585 2 -1.1779495249620573 0.36527920306359973 1.0 ['ENST00000367602.7_1_1:180166494-180166779:+|nuORF'] 112360 20164 TLALAPALA True PC9_epitope_Rep2 839.5116540711899 839.51110496793 82.973 1 -1.1779583916279484 0.36527920306359973 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP'] 55296 8352 LADYAAPP True PC9_epitope_Rep1 816.4017692690398 816.40066993586 36.96 2 -1.1780480916337188 0.36531217540390704 1.0 ['ENSG00000214336|ENST00000428390|FOXI3'] 126619 9147 VLNDRLAT True PC9_epitope_Rep1 900.5028802926399 900.50178993586 40.034 2 -1.1781379297359658 0.3653326325274065 1.0 ['ENST00000247295.4_1_9:134133967-134134456:-|nuORF'] 136070 15635 WRHKLIHCVGP True PC9_epitope_Rep3 1344.72372960944 1344.7226299358601 65.286 2 -1.1781655423763544 0.3653393733106417 1.0 ['ENST00000540664.5_1_10:98592059-98593206:+|nuORF'] 23534 10300 EVVSIEGIHP True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 44.672 2 -1.1781721846547974 0.3653393733106417 1.0 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.L175Wfs*55|1|0.48|ENSG00000079999|chr19:10499511-10499511|G/-|frameshift_variant', 'KEAP1|p.F280Sfs*29|1|0.14|ENSG00000079999|chr19:10492039-10492063|CACTTCTGCAGCTGCATCTGCAGGA/-|frameshift_variant', 'KEAP1|p.K323*|1|0.28|ENSG00000079999|chr19:10491935-10491936|-/A|frameshift_variant', 'KEAP1|p.V420Sfs*38|1|0.56|ENSG00000079999|chr19:10491644-10491644|C/-|frameshift_variant'] 27718 9368 FPPSRIYLFFF True PC9_epitope_Rep4 1432.7543439480398 1432.7527049037901 43.643 3 -1.1782588432095757 0.3653393733106417 1.0 ['OR2L8|p.D23Y|1|0.28|ENSG00000279263|chr1:247948924-247948924|G/T|missense_variant'] 87386 25581 QPVDLRLRL True PC9_epitope_Rep5 1108.67167695324 1108.6705699358602 103.7 2 -1.178269217238425 0.3653393733106417 1.0 ['ENST00000574767.5_1_17:78704403-78727934:+|nuORF'] 81745 15359 PLPEVVHIQL True NCI_RA007_Epitope_Rep5 1143.66519459047 1143.6640899358601 65.784 2 -1.1783869889755454 0.3654223968565815 1.0 ['ENSG00000166856|ENST00000300098|GPR182'] 119878 20638 VDGGGSCL True H1975_Epitope_Rep1 706.2955899483401 706.29504496793 85.802 1 -1.1785090638836728 0.3654553645168556 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF'] 65105 11802 LQLYQWGVP True PC9_epitope_Rep2 1102.58113061334 1102.58002993586 50.727 2 -1.1785706201832384 0.3654758180566852 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 42101 6492 IDLLENVP True NCI_RA007_Epitope_Rep1 911.49639792987 911.49530993586 29.271 2 -1.178689516805755 0.36548375794584315 1.0 ['ENSG00000103647|ENST00000261861|CORO2B', 'nc|ENSG00000103647|Q9UQ03-2|CORO2B', 'CORO2B|p.G423R|1|0.28|ENSG00000103647|chr15:68719508-68719508|G/A|missense_variant'] 125168 7055 VIHEIQRLVD True H1975_Epitope_Rep3 1220.6877209402 1220.68662993586 32.102 2 -1.1787286193181372 0.36550421061851673 1.0 ['nc|ENSG00000290611|Q6ZSU1|CYP2G1P'] 118706 6865 TYTFSLEGSG True NCI_RA007_Epitope_Rep4 1060.47130538084 1060.47020993586 33.025 2 -1.1788791294195937 0.36553260175928126 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2', 'RIN2|p.P358Tfs*9|1|0.44|ENSG00000132669|chr20:19974942-19974943|-/A|frameshift_variant'] 20618 23126 EPTRRYRVWS True PC9_epitope_Rep3 1348.7000169594 1348.69890993586 94.223 2 -1.1788916515321046 0.36553260175928126 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 62454 19949 LLHSLELV True PC9_epitope_Rep3 922.5487678559 922.54766993586 81.977 2 -1.1790199978700968 0.3655530530530531 1.0 ['ENSG00000197272|ENST00000356897|IL27'] 113272 16677 TLRHEILELII True PC9_epitope_Rep5 1348.8078360728798 1348.8067299358602 69.151 2 -1.179058757173346 0.36559395410525264 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000103472|A6NIE6|RRN3P2', 'ENST00000564580.5_1_16:29086353-29108616:+|nuORF', 'ENST00000561685.1_1_16:15168568-15177423:-|nuORF', 'nc|ENSG00000085721|Q9NYV6-2|RRN3'] 102163 14135 SLRRTQRKR True NCI_RA007_Epitope_Rep4 1199.7323201471897 1199.73122993586 61.649 2 -1.1790849328240993 0.36559395410525264 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'ENST00000473691.1_1_X:79938122-79975072:-|nuORF'] 43319 10407 IFVQLEKIW True NCI_RA007_Epitope_Rep2 1174.6750309981799 1174.67392993586 45.073 2 -1.179166644818772 0.3656018918208776 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT', 'nc|ENSG00000095321|P43155-2|CRAT'] 125083 13317 VIEEKNEL True H1975_Epitope_Rep2 972.5127762699999 972.51166993586 56.354 2 -1.1792531855795327 0.36562234122416293 1.0 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9'] 131238 5057 VTEWLQRDIM True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 24.539 3 -1.1793319242411355 0.3656803253049734 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 32542 24461 GGGGGGGD True H1975_Epitope_Rep1 532.1877537515201 532.18720496793 101.4 1 -1.1794498156421533 0.3657132847884293 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000120093|ENST00000498678|HOXB3', 'HOXB3|p.P289Rfs*140|1|0.29|ENSG00000120093|chr17:48550764-48550764|G/-|frameshift_variant', 'WIPF1|p.G89D|1|0.07|ENSG00000115935|chr2:174575296-174575296|C/T|missense_variant', 'HOXB3|p.S181C|1|0.22|ENSG00000120093|chr17:48551089-48551089|T/A|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENST00000470900.1_1_3:51422898-51423054:+|nuORF', 'ENSG00000206418|ENST00000649141|RAB12', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ZXDB|p.S747Cfs*17|1|0.09|ENSG00000198455|chrX:57594287-57594288|AG/-|frameshift_variant', 'ENSG00000198455|ENST00000374888|ZXDB', 'ZXDB|p.F334Lfs*22|1|0.19|ENSG00000198455|chrX:57593045-57593045|C/-|frameshift_variant'] 32541 24564 GGGGGGGD True H1975_Epitope_Rep1 532.1877537515201 532.18720496793 101.79 1 -1.1795160803108804 0.3657337320304778 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000120093|ENST00000498678|HOXB3', 'HOXB3|p.P289Rfs*140|1|0.29|ENSG00000120093|chr17:48550764-48550764|G/-|frameshift_variant', 'WIPF1|p.G89D|1|0.07|ENSG00000115935|chr2:174575296-174575296|C/T|missense_variant', 'HOXB3|p.S181C|1|0.22|ENSG00000120093|chr17:48551089-48551089|T/A|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENST00000470900.1_1_3:51422898-51423054:+|nuORF', 'ENSG00000206418|ENST00000649141|RAB12', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ZXDB|p.S747Cfs*17|1|0.09|ENSG00000198455|chrX:57594287-57594288|AG/-|frameshift_variant', 'ENSG00000198455|ENST00000374888|ZXDB', 'ZXDB|p.F334Lfs*22|1|0.19|ENSG00000198455|chrX:57593045-57593045|C/-|frameshift_variant'] 100243 11376 SIWWIIRGP True H1975_Epitope_Rep3 1126.6287495120998 1126.62764993586 48.869 2 -1.1795566952044763 0.3657541787608848 1.0 ['ENSG00000080293|ENST00000019103|SCTR'] 37731 5805 GWGGYNNT True NCI_RA007_Epitope_Rep4 867.35113067851 867.35002993586 28.953 2 -1.1797035243241922 0.36581093929840364 1.0 ['ENSG00000170927|ENST00000371117|PKHD1', 'nc|ENSG00000170927|P08F94-2|PKHD1'] 115743 15558 TSCLMRHLYR True PC9_epitope_Rep1 1278.63253164654 1278.63142993586 64.667 2 -1.1797218712865745 0.36581093929840364 1.0 ['ENSG00000100426|ENST00000216268|ZBED4'] 128093 7765 VPLELCFG True NCI_RA007_Epitope_Rep5 876.4415259060399 876.44042993586 36.565 2 -1.179732999116711 0.36581093929840364 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000518333.1_1_8:124821116-124824941:+|nuORF'] 4606 19013 AKVIRSLHGR True NCI_RA007_Epitope_Rep1 1135.69380938015 1135.6927099358602 78.097 2 -1.1797816314696763 0.36581093929840364 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 48527 21656 KAKVRQWRAH True H1975_Epitope_Rep2 1278.7421565549 1278.74050490379 89.587 3 -1.1797952677569465 0.3658188733063941 1.0 ['ENSG00000153237|ENST00000283233|CCDC148', 'nc|ENSG00000153237|Q8NFR7-2|CCDC148'] 43235 22608 IFLIFAMP True PC9_epitope_Rep2 950.52994698762 950.52884993586 92.462 2 -1.1798021214391274 0.3658222305623319 1.0 ['ENSG00000130368|ENST00000674077|MAS1'] 99551 17745 SIECFLFTVM True PC9_epitope_Rep1 1188.55590403528 1188.55480993586 73.054 2 -1.179812005715542 0.3658222305623319 1.0 ['ENSG00000197309|ENST00000641351|OR10D3'] 112647 7021 TLFLMWIYH True PC9_epitope_Rep4 1222.62088725034 1222.6192349037901 34.256 3 -1.179856121758107 0.3658676941553243 1.0 ['ENST00000239893.9_1_13:37578680-37580262:+|nuORF'] 58994 8078 LEVHTEALAA True H1975_Epitope_Rep1 1052.5502244078798 1052.54912993586 36.015 2 -1.1799304404522117 0.36587562705630683 1.0 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000466538.1_1_1:227299979-227300497:-|nuORF'] 67171 7647 LSQYPMMRGP True NCI_RA007_Epitope_Rep3 1178.55763537078 1178.55652993586 37.204 2 -1.1799715571074862 0.3658789827243273 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2'] 64008 21207 LNYRNIWKNLL True NCI_RA007_Epitope_Rep1 1445.8143184356497 1445.8132299358601 86.769 2 -1.1799825029701634 0.3658789827243273 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17'] 70019 15447 LVMETLCIV True PC9_epitope_Rep2 1019.5395256951499 1019.53842993586 64.694 2 -1.1800586976345968 0.36589942456842633 1.0 ['ENSG00000198700|ENST00000361565|IPO9', 'IPO9|p.C591F|1|0.12|ENSG00000198700|chr1:201866876-201866876|G/T|missense_variant'] 20284 13265 ENRHMIMMKKK True NCI_RA007_Epitope_Rep2 1444.7465158529596 1444.7454099358602 56.233 2 -1.180103590591668 0.3659073566755482 1.0 ['PCDH11X|p.Q863H|1|0.68|ENSG00000102290|chrX:91878829-91878829|G/T|missense_variant'] 136726 7228 WYFRINYRQFF True NCI_RA007_Epitope_Rep1 1638.8095674083795 1638.8079149037903 32.104 3 -1.180120950859093 0.3659107113818596 1.0 ['ENST00000589184.5_1_17:42266304-42268229:+|nuORF', 'nc|ENSG00000168591|Q71RG4-2|TMUB2', 'ENSG00000168591|ENST00000538716|TMUB2'] 44001 8688 IIGDIGPK True NCI_RA007_Epitope_Rep4 811.4803539429099 811.47924993586 40.207 2 -1.1801463927030615 0.3659107113818596 1.0 ['ENSG00000168306|ENST00000302819|ACOX2'] 3576 15898 AGLYKENLL True PC9_epitope_Rep5 1019.5651461960299 1019.56404993586 66.142 2 -1.1801556234064912 0.3659140659203202 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 114043 10363 TPDRIRWRRWR True NCI_RA007_Epitope_Rep2 1596.8861950196397 1596.8845349037902 44.901 3 -1.1801626896577213 0.3659140659203202 1.0 ['ENST00000256858.10_2_18:59854532-59854781:+|nuORF'] 115949 22217 TSHGLRRHPS True H1975_Epitope_Rep2 1146.6006372713 1146.59899490379 91.814 3 -1.1802968504866282 0.36598453956420585 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 80625 6191 PGRWDHRFYMR True PC9_epitope_Rep4 1519.7255205145898 1519.7238749037901 30.85 3 -1.1803393117004164 0.3659924700113825 1.0 ['ITGA10|p.Q695R|1|0.17|ENSG00000143127|chr1:145899180-145899180|T/C|missense_variant'] 78649 14831 NYVAQLILD True PC9_epitope_Rep5 1047.5600608155898 1047.5589699358602 62.048 2 -1.1803740031783918 0.3660004002601691 1.0 ['ENSG00000018699|ENST00000317907|TTC27', 'TTC27|p.S703*|1|0.05|ENSG00000018699|chr2:32811133-32811133|C/-|frameshift_variant'] 43286 7544 IFSSSLKR True NCI_RA007_Epitope_Rep2 936.53926580136 936.53816993586 33.97 2 -1.1803861929780388 0.366008330310573 1.0 ['ENST00000367161.7_1_1:205116358-205116508:-|nuORF'] 132797 26712 VVKIGLGVL True NCI_RA007_Epitope_Rep1 896.6058888091999 896.60478993586 110.69 2 -1.1804483123218505 0.36601626016260164 1.0 ['ENSG00000167355|ENST00000300773|OR51B5', 'OR51B5|p.T137S|1|0.27|ENSG00000167355|chr11:5343116-5343116|T/A|missense_variant'] 49632 22688 KGGHRGGGGG True PC9_epitope_Rep3 838.4157966237398 838.41468993586 92.543 2 -1.18047364360622 0.3660196117670602 1.0 ['ENSG00000136026|ENST00000378026|CKAP4'] 66234 11951 LSEVWQKV True PC9_epitope_Rep2 987.5389314481899 987.53782993586 51.292 2 -1.1805066453842201 0.3660196117670602 1.0 ['PMFBP1|p.L507Tfs*33|1|0.12|ENSG00000118557|chr16:72130651-72130652|-/T|frameshift_variant', 'nc|ENSG00000118557|Q8TBY8-3|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-4|PMFBP1', 'ENSG00000118557|ENST00000237353|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-1|PMFBP1'] 84601 8673 QDALVLGFDW True H1975_Epitope_Rep3 1162.56587447202 1162.56476993586 38.359 2 -1.1806987972820693 0.3660559064473766 1.0 ['nc|ENSG00000100395|Q969R5-2|L3MBTL2', 'nc|ENSG00000100395|Q969R5-3|L3MBTL2', 'ENST00000466589.5_1_22:41601366-41623356:+|nuORF', 'ENSG00000100395|ENST00000216237|L3MBTL2', 'ENST00000479978.5_1_22:41601366-41613299:+|nuORF'] 102648 23534 SLWVEEAYY True NCI_RA007_Epitope_Rep3 1158.5233409537 1158.52168490379 102.1 3 -1.1807151905196376 0.3660559064473766 1.0 ['GLRB|p.S22Y|1|0.56|ENSG00000109738|chr4:157078089-157078089|C/A|missense_variant'] 87016 8741 QMLQSYTAA True PC9_epitope_Rep1 1011.4695315590299 1011.46842993586 38.461 2 -1.180734176528441 0.3660559064473766 1.0 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 122511 4872 VGENIEPV True NCI_RA007_Epitope_Rep1 855.4337976733099 855.43270993586 23.03 2 -1.1807962013501314 0.3660638351093101 1.0 ['nc|ENSG00000064933|P54277-2|PMS1', 'nc|ENSG00000064933|P54277-3|PMS1', 'ENSG00000064933|ENST00000441310|PMS1', 'nc|ENSG00000064933|P54277-4|PMS1', 'ENST00000421722.5_1_2:190656520-190720594:+|nuORF'] 80144 26626 PFRHLLLLLQ True PC9_epitope_Rep1 1248.7706627185198 1248.76956993586 108.18 2 -1.180824119857318 0.36608427029528373 1.0 ['CD4|p.V13L|1|0.13|ENSG00000010610|chr12:6800175-6800175|G/T|missense_variant'] 98824 6494 SGPPLKAG True NCI_RA007_Epitope_Rep5 725.40718900265 725.4066449679301 31.646 1 -1.1808746290396706 0.3660876199052014 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF'] 130778 15108 VTAEPPKP True PC9_epitope_Rep3 837.45961849833 837.45852993586 63.251 2 -1.1808920623125339 0.3660876199052014 1.0 ['ENSG00000121316|ENST00000240617|PLBD1'] 123691 5866 VGRAPKQA True PC9_epitope_Rep1 825.48208527841 825.48098993586 27.38 2 -1.1809067485889506 0.3660909693475569 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 62594 9174 LLLAACAF True PC9_epitope_Rep6 820.45169666692 820.45058993586 45.415 2 -1.1809161152381273 0.3660909693475569 1.0 ['ENST00000354670.8_1_15:40383078-40383165:-|nuORF'] 19708 8430 ELRQLRRRWFH True NCI_RA007_Epitope_Rep1 1595.89094604691 1595.88931490379 36.793 3 -1.1809869938111504 0.3660988969760636 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 57906 12706 LEGDLIILRN True H1975_Epitope_Rep3 1154.6659228664598 1154.66482993586 54.084 2 -1.1810983911022748 0.3661068244062879 1.0 ['ENST00000483721.1_1_2:99786008-99786047:-|nuORF'] 68544 8484 LTGLLVGT True H1975_Epitope_Rep3 772.46945490604 772.46834993586 37.618 2 -1.1811976228238106 0.3661101732007753 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B'] 101862 10871 SLPKITRSVMP True H1975_Epitope_Rep3 1227.7009284761898 1227.6998299358602 46.898 2 -1.181209882991458 0.3661101732007753 1.0 ['ENST00000367137.3_1_1:205759622-205759775:-|nuORF'] 78764 8075 PAAIPTSA True PC9_epitope_Rep2 726.39120458534 726.39065496793 36.42 1 -1.1812427198491473 0.3661260269861318 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.2|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 620 7313 AASFSAAAA True PC9_epitope_Rep1 765.3657181134898 765.36462993586 32.943 2 -1.181262244795313 0.3661260269861318 1.0 ['ENSG00000135334|ENST00000257787|AKIRIN2'] 48756 6645 KDKANMQHR True H1975_Epitope_Rep1 1126.5665602617 1126.5654699358602 30.613 2 -1.1813374668182441 0.36615896358543415 1.0 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF'] 62193 18878 LLEPPFLFSL True PC9_epitope_Rep5 1174.66379760814 1174.66216490379 77.633 3 -1.1813924931997095 0.3661918993610024 1.0 ['ENST00000587342.1_1_18:47808965-47809814:-|nuORF'] 91089 21043 RFPFWGASFL True PC9_epitope_Rep2 1226.6236641316598 1226.62201490379 86.396 3 -1.1814484558625689 0.366195245776594 1.0 ['ENST00000392562.5_1_17:73401186-73401555:-|nuORF'] 34405 5868 GPHCPLPV True PC9_epitope_Rep3 818.4108944841 818.40978993586 27.637 2 -1.18145077444895 0.366195245776594 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 69244 8187 LTSVPSDRSP True H1975_Epitope_Rep3 1057.54038800017 1057.53928993586 36.471 2 -1.181518780050312 0.36619859202480837 1.0 ['ENSG00000158158|ENST00000377075|CNNM4', 'nc|ENSG00000158158|Q6P4Q7-2|CNNM4'] 25480 9515 FEETLTGFK True PC9_epitope_Rep3 1070.5284263341398 1070.52732993586 41.546 2 -1.1815253981749219 0.36619859202480837 1.0 ['ENSG00000169299|ENST00000381967|PGM2', 'nc|ENSG00000169299|Q96G03-2|PGM2', 'ENST00000505986.5_1_4:37841281-37848924:+|nuORF'] 136620 14800 WWPSSSTS True NCI_RA007_Epitope_Rep5 936.3977465177601 936.39664993586 63.6 2 -1.1815891796399034 0.3661991199119912 1.0 ['PPP1CA|p.D179Tfs*73|1|0.16|ENSG00000172531|chr11:67399152-67399152|C/-|frameshift_variant'] 102003 8619 SLQPSQWG True PC9_epitope_Rep3 901.4293809992098 901.42828993586 38.102 2 -1.1815901568632838 0.3661991199119912 1.0 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 56571 15183 LDGTEINGRN True PC9_epitope_Rep3 1087.52580056519 1087.52470993586 63.546 2 -1.1815962614895732 0.3661991199119912 1.0 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENST00000414124.1_1_17:16520269-16520722:-|nuORF'] 37286 17582 GVRTQHRR True NCI_RA007_Epitope_Rep5 1008.5689432202 1008.56837496793 74.41 1 -1.1816448284544059 0.3661991199119912 1.0 ['nc|ENSG00000133107|Q9UBN4-5|TRPC4'] 139883 8209 YPSICKGGK True PC9_epitope_Rep1 951.4847877003499 951.48368993586 36.408 2 -1.1816845186722456 0.3661991199119912 1.0 ['ENSG00000112293|ENST00000230036|GPLD1', 'nc|ENSG00000112293|P80108-2|GPLD1', 'ENST00000378243.8_1_6:24473808-24489784:-|nuORF'] 123746 10268 VGRGYASP True PC9_epitope_Rep3 805.4082516318099 805.40714993586 44.443 2 -1.181729547694975 0.3661991199119912 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 82783 20353 PRPGPALA True PC9_epitope_Rep3 777.44972252097 777.44862993586 83.537 2 -1.1817449575091237 0.3661991199119912 1.0 ['ENST00000327906.7_1_3:52444811-52444937:+|nuORF'] 139871 7184 YPQNKRPV True NCI_RA007_Epitope_Rep3 1000.5454138109599 1000.54430993586 35.371 2 -1.1817660087764408 0.3661991199119912 1.0 ['ENSG00000075188|ENST00000552283|NUP37'] 123960 11943 VGRYLTLAI True NCI_RA007_Epitope_Rep3 1004.6018660579199 1004.60076993586 54.103 2 -1.1818248004953924 0.3661991199119912 1.0 ['ENSG00000174136|ENST00000513185|RGMB'] 67682 14713 LSWEYLSGG True PC9_epitope_Rep5 1010.4709114580198 1010.46980993586 61.592 2 -1.181832127678387 0.3661991199119912 1.0 ['nc|ENSG00000101180|Q9Y5N1-3|HRH3', 'nc|ENSG00000101180|Q9Y5N1-7|HRH3', 'nc|ENSG00000101180|Q9Y5N1-4|HRH3', 'ENSG00000101180|ENST00000340177|HRH3', 'nc|ENSG00000101180|Q9Y5N1-2|HRH3', 'nc|ENSG00000101180|Q9Y5N1-5|HRH3', 'nc|ENSG00000101180|Q9Y5N1-6|HRH3'] 87915 19158 QRKMRYWLL True NCI_RA007_Epitope_Rep4 1292.7175815998398 1292.7164899358602 82.839 2 -1.1818321334005781 0.3661991199119912 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'COL14A1|p.R971Sfs*29|1|0.42|ENSG00000187955|chr8:120262910-120262910|G/-|frameshift_variant', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 42971 7065 IESQSRTPR True NCI_RA007_Epitope_Rep1 1072.5625204270798 1072.5614299358601 31.476 2 -1.1818617650009835 0.3661991199119912 1.0 ['ZNF417|p.R75I|1|0.23|ENSG00000173480|chr19:57910054-57910054|C/A|missense_variant'] 43036 14320 IETQAVRAEL True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 59.905 2 -1.1819149754300735 0.3661991199119912 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'ENST00000496752.1_1_6:170065563-170070787:-|nuORF'] 72459 9061 MKVRIFLKK True H1975_Epitope_Rep3 1161.74200544253 1161.7403549037901 39.838 3 -1.1819153151774202 0.3661991199119912 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 2343 16112 AEPSSLSPAL True NCI_RA007_Epitope_Rep2 970.49712620586 970.4965749679301 67.396 1 -1.181966032483734 0.3661991199119912 1.0 ['ENST00000538105.6_1_14:24909368-24909470:-|nuORF'] 125755 7150 VKSYIVNR True H1975_Epitope_Rep3 977.5658149023699 977.56470993586 32.474 2 -1.1819789308073203 0.3661991199119912 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN'] 66882 10994 LSNIRWWLEEY True NCI_RA007_Epitope_Rep1 1507.7459640923103 1507.7448699358602 46.758 2 -1.1819995829855718 0.3661991199119912 1.0 ['ENSG00000114480|ENST00000429644|GBE1'] 11090 14605 DCGFGDGG True NCI_RA007_Epitope_Rep5 726.2279043113399 726.2273549679301 62.846 1 -1.1820122364080818 0.3661991199119912 1.0 ['ENSG00000108582|ENST00000225719|CPD'] 87539 7667 QQKLLDSTK True PC9_epitope_Rep5 1059.59242357303 1059.5913299358601 34.435 2 -1.1820854003064745 0.3661991199119912 1.0 ['nc|ENSG00000186409|Q5VVM6-2|CCDC30', 'nc|ENSG00000186409|Q5VVM6|CCDC30', 'ENSG00000186409|ENST00000657597|CCDC30', 'ENST00000471390.5_1_1:43002943-43047151:+|nuORF', 'ENST00000514642.1_1_1:43002254-43055163:+|nuORF'] 93644 24372 RQRFLCLRRW True PC9_epitope_Rep2 1432.7986258851997 1432.7975299358602 99.315 2 -1.1821175394282049 0.3662091552288807 1.0 ['ENST00000466292.1_1_3:119033568-119041517:-|nuORF'] 100572 16641 SLCCHCHS True PC9_epitope_Rep6 888.3040635404002 888.30296993586 76.477 2 -1.1821357059019302 0.3662091552288807 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 55560 18688 LAGSLVRLSAL True PC9_epitope_Rep6 1098.67609362734 1098.6749899358601 84.527 2 -1.1821894401343622 0.3662091552288807 1.0 ['ENSG00000178971|ENST00000651323|CTC1'] 129829 8844 VRRLVKILLLG True NCI_RA007_Epitope_Rep5 1278.8863611770998 1278.8847149037902 40.684 3 -1.182193644929446 0.3662091552288807 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 126558 15621 VLLPMPRK True PC9_epitope_Rep5 952.58919319924 952.58808993586 65.097 2 -1.1821979951130368 0.3662091552288807 1.0 ['ENST00000540501.1_1_11:63960601-63960742:+|nuORF'] 139715 25871 YNNGGGGC True H1975_Epitope_Rep1 740.25478776552 740.2542349679301 107.35 1 -1.182199116250128 0.3662091552288807 1.0 ['HNRNPA1|p.G297C|1|0.32|ENSG00000135486|chr12:54283216-54283216|G/T|missense_variant'] 139520 15419 YLSPTFKEF True NCI_RA007_Epitope_Rep5 1130.56481184286 1130.56370993586 66.012 2 -1.182366627691645 0.3662375 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 16794 8342 EEVGTAVR True H1975_Epitope_Rep3 859.4399456829099 859.4393949679301 37.073 1 -1.18238832151139 0.3662375 1.0 ['ENST00000437152.7_1_19:6752436-6752562:-|nuORF'] 13448 5741 DNDGSTALSIA True PC9_epitope_Rep2 1062.4829326937 1062.48182993586 27.474 2 -1.1824258331050088 0.36624084397890055 1.0 ['nc|ENSG00000107104|Q14678-2|KANK1', 'ENSG00000107104|ENST00000382297|KANK1'] 64827 10941 LQDERGVDP True H1975_Epitope_Rep3 1027.4934378077498 1027.4923499358601 47.171 2 -1.1824412895809786 0.36624084397890055 1.0 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 13337 10492 DLVIHGSP True PC9_epitope_Rep1 836.4392174069201 836.43812993586 45.247 2 -1.1824457879951755 0.36624876567128734 1.0 ['ENST00000438163.1_1_2:32427889-32428366:+|nuORF'] 119649 9777 VAVASPSL True H1975_Epitope_Rep3 742.42250471362 742.4219549679301 42.63 1 -1.1824680626308526 0.366269186540673 1.0 ['ENSG00000177508|ENST00000329734|IRX3', 'ENST00000558180.2_1_16:54318400-54319510:-|nuORF'] 77873 8256 NVGHRELRA True NCI_RA007_Epitope_Rep2 1050.56827451386 1050.5671699358602 36.752 2 -1.182548793357202 0.366272529560283 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2'] 117918 15059 TWRWPWLRWWQ True NCI_RA007_Epitope_Rep2 1699.8524352798697 1699.8513299358601 63.261 2 -1.1825844059397894 0.366272529560283 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 59079 21527 LEWLHDEIS True NCI_RA007_Epitope_Rep5 1140.54513902744 1140.54349490379 89.887 3 -1.1826132310925652 0.3662758724127587 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 116777 5740 TVDRYQAP True NCI_RA007_Epitope_Rep2 948.46649478392 948.46538993586 26.944 2 -1.1826689720920405 0.3662758724127587 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 121351 23288 VEVHGLRKR True NCI_RA007_Epitope_Rep4 1092.651610215 1092.65050993586 101.14 2 -1.182690805891322 0.36629629166718747 1.0 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81'] 87523 8529 QQIATTFARL True NCI_RA007_Epitope_Rep5 1147.6349570913499 1147.63386993586 39.491 2 -1.18274002741695 0.36629963380035246 1.0 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1'] 64475 7417 LPQDEGAWP True PC9_epitope_Rep5 1011.4661604307499 1011.46506993586 33.485 2 -1.182764030115088 0.36629963380035246 1.0 ['ENSG00000105559|ENST00000263265|PLEKHA4'] 112727 14322 TLGTLQPPD True PC9_epitope_Rep4 940.48656152216 940.48601496793 62.991 1 -1.182845453681399 0.36630755386692 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 52424 21780 KKRLKKEKKRL True PC9_epitope_Rep3 1453.9932858571299 1453.99218993586 89.075 2 -1.1828695200006734 0.3663196830911113 1.0 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000490753.1_1_20:2637050-2637903:+|nuORF', 'ENST00000466447.5_1_20:2636822-2638033:+|nuORF', 'ENST00000492135.5_1_20:2636822-2638937:+|nuORF', 'ENST00000462630.5_1_20:2637388-2638937:+|nuORF'] 24325 12223 EYVHLVCQMRM True H1975_Epitope_Rep2 1407.6461331053497 1407.64447490379 52.098 3 -1.1828897405496537 0.3663196830911113 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 46378 11122 ISRWFEVERRE True H1975_Epitope_Rep3 1505.77391017565 1505.77280993586 47.876 2 -1.1829437900626896 0.3663196830911113 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 37154 6671 GVQKWEETW True PC9_epitope_Rep4 1161.5454733806098 1161.54382490379 32.834 3 -1.1829928505823601 0.3663196830911113 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 139991 9883 YQDPRGAAPPF True PC9_epitope_Rep1 1217.5829215184897 1217.58127490379 42.872 3 -1.1830249612555692 0.3663196830911113 1.0 ['nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 66129 19288 LSELLSFPSPL True PC9_epitope_Rep1 1201.6594405036901 1201.65834993586 78.995 2 -1.1830459157671676 0.3663196830911113 1.0 ['ENST00000511638.5_1_5:137515050-137515239:+|nuORF'] 32795 3879 GHFHGPWC True PC9_epitope_Rep5 939.3809913381499 939.37988993586 19.999 2 -1.1830620564557754 0.3663196830911113 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 78049 8552 NVSWKADGTRY True H1975_Epitope_Rep2 1295.6258489596298 1295.62420490379 37.85 3 -1.1830627545182595 0.3663196830911113 1.0 ['RNGTT|p.K290N|1|0.67|ENSG00000111880|chr6:88890521-88890521|T/A|missense_variant'] 91296 25088 RGPVITALT True PC9_epitope_Rep1 926.5549158655 926.55380993586 101.39 2 -1.1830633024621444 0.3663196830911113 1.0 ['nc|ENSG00000196365|P36776-2|LONP1'] 125367 11978 VIRGGATR True NCI_RA007_Epitope_Rep1 828.49298431528 828.49188993586 50.579 2 -1.1830794060692464 0.3663196830911113 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 139893 8564 YPSYGLNYYQQ True NCI_RA007_Epitope_Rep5 1394.61428121642 1394.6131899358602 39.624 2 -1.1831585894637773 0.3663196830911113 1.0 ['CON__P02668'] 109331 4509 TCCECCNN True H1975_Epitope_Rep3 888.2234302612001 888.22232993586 22.463 2 -1.1832006203655319 0.36633552014995313 1.0 ['ENSG00000205359|ENST00000506729|SLCO6A1', 'SLCO6A1|p.V95I|1|0.09|ENSG00000205359|chr5:102498562-102498562|C/T|missense_variant', 'SLCO6A1|p.R106L|1|0.23|ENSG00000205359|chr5:102498528-102498528|C/A|missense_variant', 'nc|ENSG00000205359|Q86UG4-3|SLCO6A1', 'nc|ENSG00000205359|Q86UG4-2|SLCO6A1'] 68264 12231 LTEAQTREL True PC9_epitope_Rep6 1059.5560380643099 1059.5549499358601 58.42 2 -1.1832058042761509 0.36633552014995313 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 98660 16173 SGCACGCGCE True NCI_RA007_Epitope_Rep1 888.2234302612 888.22232993586 67.018 2 -1.183298525191737 0.36636843026016547 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 74132 22670 NECILLFSDLP True PC9_epitope_Rep1 1262.62167509598 1262.6205699358602 92.004 2 -1.1833233687834919 0.36637634798255586 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 18236 12150 EIPAYSRWQDP True H1975_Epitope_Rep3 1360.6411646706 1360.64006993586 51.904 2 -1.1833831535914952 0.36639676113360325 1.0 ['ENSG00000187531|ENST00000328666|SIRT7', 'ENST00000572976.5_1_17:79870294-79872532:-|nuORF'] 168 24850 AADRRRYRR True PC9_epitope_Rep1 1218.6806189274998 1218.67952993586 100.49 2 -1.1834204929878769 0.3664375859052855 1.0 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3', 'ENST00000542002.5_1_12:10853889-10868397:-|nuORF'] 122910 4725 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 23.546 2 -1.1834324480093332 0.3664375859052855 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 93971 24982 RRIIRILNLSK True PC9_epitope_Rep2 1380.9041364995599 1380.90250490379 101.76 3 -1.183532126610546 0.3664784086365454 1.0 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 63895 9161 LNPFQNLSIYY True H1975_Epitope_Rep3 1370.6870522338602 1370.6859499358602 40.228 2 -1.1835682065874076 0.3664784086365454 1.0 ['MYO3B|p.S393Y|1|0.16|ENSG00000071909|chr2:170383182-170383182|C/A|missense_variant'] 25269 12539 FDLNRHWL True PC9_epitope_Rep1 1099.55631284783 1099.5552099358601 53.102 2 -1.1837044892398783 0.36649881923706473 1.0 ['ENSG00000186094|ENST00000371839|AGBL4', 'nc|ENSG00000186094|Q5VU57-2|AGBL4'] 30787 7236 GAMESGRVSSI True PC9_epitope_Rep5 1092.52335803704 1092.52226993586 32.796 2 -1.1837700813578007 0.3665146498406947 1.0 ['ENSG00000235034|ENST00000425202|C19orf81'] 42030 22040 IDHPQKVL True PC9_epitope_Rep4 948.53926580136 948.53816993586 92.998 2 -1.1838063104844112 0.3665146498406947 1.0 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'MCM10|p.E571Rfs*2|1|0.26|ENSG00000065328|chr10:13192530-13192530|G/-|frameshift_variant'] 33279 24457 GKKKPKLQNA True NCI_RA007_Epitope_Rep3 1110.6873270173799 1110.6862299358602 105.84 2 -1.1838216297098811 0.36652256484581935 1.0 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 56805 11171 LDNEWDRDYGR True NCI_RA007_Epitope_Rep2 1437.6273055116098 1437.62620993586 48.033 2 -1.1839084073446728 0.36652923538230886 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 81059 12690 PIQLPHVRDC True NCI_RA007_Epitope_Rep3 1176.60736244452 1176.60571490379 57.16 3 -1.183962310416403 0.36652923538230886 1.0 ['ENST00000270460.10_2_19:56190088-56190187:+|nuORF'] 46381 11241 ISRWFEVERRE True NCI_RA007_Epitope_Rep5 1505.77391017565 1505.77280993586 49.877 2 -1.183963481369284 0.36652923538230886 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 122106 4832 VGADSFRRV True NCI_RA007_Epitope_Rep5 1005.5355774032499 1005.53448993586 25.276 2 -1.183966345540574 0.36652923538230886 1.0 ['ENST00000585558.5_1_17:68101078-68101171:+|nuORF'] 22753 8795 ETVELHKLKL True NCI_RA007_Epitope_Rep3 1208.71287305888 1208.71176993586 41.684 2 -1.1839794253794151 0.3665371497107732 1.0 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 129830 9710 VRRLVKILLLG True NCI_RA007_Epitope_Rep5 1278.8863611770998 1278.8847149037902 43.983 3 -1.1841786467748119 0.36660753104620075 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 31430 5929 GEAHQEVL True PC9_epitope_Rep1 881.42429561877 881.42318993586 27.619 2 -1.1842559615941974 0.3666187769379724 1.0 ['ENSG00000104219|ENST00000262096|ZDHHC2'] 81211 22935 PKGRRTAA True PC9_epitope_Rep2 855.50388335215 855.50278993586 93.719 2 -1.1842882786822302 0.3666187769379724 1.0 ['nc|ENSG00000136002|Q9NR80-4|ARHGEF4'] 18330 15950 EISPWCYTM True PC9_epitope_Rep1 1128.46200365044 1128.4609099358602 66.161 2 -1.1842996796109928 0.3666187769379724 1.0 ['ENSG00000198670|ENST00000316300|LPA'] 3866 10939 AGYGAQQP True H1975_Epitope_Rep2 790.36096708622 790.35986993586 47.111 2 -1.1843128090292085 0.36662668965344924 1.0 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG', 'ENST00000481203.1_1_3:100463567-100467372:+|nuORF'] 46424 5627 ISSSNLYP True PC9_epitope_Rep3 879.43379767331 879.43270993586 26.722 2 -1.1843358133521447 0.36663002198680794 1.0 ['ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 99632 7052 SIFNSTSVL True PC9_epitope_Rep6 966.5022115863001 966.50110993586 36.139 2 -1.184349443053211 0.36663002198680794 1.0 ['ENST00000274242.9_2_5:40830383-40830557:-|nuORF'] 20749 4109 EQEYRKRGRSR True NCI_RA007_Epitope_Rep2 1463.7705561307098 1463.7689249037899 20.623 3 -1.184407145591402 0.3666504266136991 1.0 ['PPIG|p.R600K|1|0.54|ENSG00000138398|chr2:169637057-169637057|G/A|missense_variant'] 130390 4035 VSLGGPAR True NCI_RA007_Epitope_Rep4 755.4289870763901 755.42788993586 21.779 2 -1.184526726433645 0.36667083073079326 1.0 ['ENST00000375190.8_1_19:3606541-3606769:-|nuORF'] 14935 15786 DYEDPAFYML True PC9_epitope_Rep5 1262.5165413210998 1262.51544993586 65.714 2 -1.1845614329438365 0.36667416179483336 1.0 ['IL21R|p.G372Afs*8|1|0.12|ENSG00000103522|chr16:27448780-27448780|G/-|frameshift_variant', 'ENSG00000103522|ENST00000337929|IL21R', 'IL21R|p.A202Qfs*29|1|0.29|ENSG00000103522|chr16:27444636-27444636|G/-|frameshift_variant'] 22213 19474 ESYERWRRIY True PC9_epitope_Rep1 1456.7211463268 1456.72004993586 79.723 2 -1.1845663378516478 0.36667416179483336 1.0 ['MRPS21|p.C60W|1|0.13|ENSG00000266472|chr1:150308144-150308144|C/G|missense_variant'] 139716 26709 YNNGGGGC True H1975_Epitope_Rep1 740.25478776552 740.2542349679301 111.22 1 -1.1845794904656493 0.3666774926924326 1.0 ['HNRNPA1|p.G297C|1|0.32|ENSG00000135486|chr12:54283216-54283216|G/T|missense_variant'] 124139 14226 VGSRPELR True NCI_RA007_Epitope_Rep3 912.5141136826799 912.5130099358599 63.268 2 -1.1846001523426122 0.3666774926924326 1.0 ['ENSG00000268480|ENST00000691075|NFILZ'] 83659 5748 PVEKREDP True H1975_Epitope_Rep2 968.4927095317598 968.49160993586 27.107 2 -1.1847713256451213 0.3667478608456686 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D'] 46215 8075 ISNEILPYA True H1975_Epitope_Rep3 1018.53351171458 1018.53240993586 36.034 2 -1.1848223095330646 0.36675118977728366 1.0 ['ENST00000547095.5_1_12:62864501-62986526:+|nuORF', 'nc|ENSG00000061987|Q7Z3U7-3|MON2', 'ENST00000551307.5_1_12:62954224-62986526:+|nuORF', 'nc|ENSG00000061987|Q7Z3U7-2|MON2', 'nc|ENSG00000061987|Q7Z3U7-6|MON2', 'nc|ENSG00000061987|Q7Z3U7-5|MON2', 'ENSG00000061987|ENST00000393630|MON2'] 118265 19532 TYLFVQLCKV True PC9_epitope_Rep4 1212.65766668188 1212.65656993586 83.251 2 -1.1848583791186413 0.36675118977728366 1.0 ['ENST00000596232.1_1_19:36036641-36037015:+|nuORF'] 30433 4574 GAETWVFLQL True NCI_RA007_Epitope_Rep5 1162.6022599807397 1162.60060490379 24.253 3 -1.1849167467308641 0.366809063429014 1.0 ['ENST00000406477.7_1_22:44395288-44395533:+|nuORF'] 17058 6223 EGGPLEGAAW True PC9_epitope_Rep3 985.4505103666099 985.44940993586 28.975 2 -1.184948240564095 0.36681239070696975 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 111558 20355 TIAPILSVPL True PC9_epitope_Rep5 1022.6375828603 1022.6364899358599 83.33 2 -1.1849853736479052 0.36681239070696975 1.0 ['ENSG00000187140|ENST00000371116|FOXD3'] 132083 13512 VTTRAAAN True NCI_RA007_Epitope_Rep3 802.4297153523798 802.4291649679301 60.438 1 -1.1851170964248778 0.3668473509354782 1.0 ['CD99L2|p.P111A|1|0.35|ENSG00000102181|chrX:150795433-150795433|G/C|missense_variant'] 69447 19878 LTYRDLYYF True PC9_epitope_Rep2 1252.61282466444 1252.61172993586 81.854 2 -1.1851490276334415 0.3668473509354782 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 122567 10017 VGFDASTT True H1975_Epitope_Rep3 796.3602983798801 796.35920993586 43.568 2 -1.1851581313181345 0.3668473509354782 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-2|PLEKHH2'] 142159 12144 YVSVPGSK True PC9_epitope_Rep3 835.4439684341899 835.44286993586 51.753 2 -1.1851663218211088 0.3668473509354782 1.0 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP'] 22953 14292 EVELKFPAP True H1975_Epitope_Rep1 1028.5542471591598 1028.5531499358601 60.16 2 -1.1852122779126242 0.3668473509354782 1.0 ['ENSG00000025796|ENST00000369002|SEC63', 'SEC63|p.D730Ifs*4|1|0.35|ENSG00000025796|chr6:107871799-107871799|C/-|frameshift_variant'] 120754 18204 VEKRLTFL True PC9_epitope_Rep2 1004.6018660579199 1004.60076993586 75.329 2 -1.1852281269499885 0.3668473509354782 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2'] 137106 9015 YARAFLDDT True H1975_Epitope_Rep2 1070.50327421546 1070.5021699358601 39.627 2 -1.1852369205611697 0.3668552587208213 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9'] 36150 17018 GVAQVDQI True PC9_epitope_Rep5 828.4341320264798 828.43302993586 70.478 2 -1.1853404844725135 0.36687439897091334 1.0 ['ENST00000606788.5_1_20:44518901-44519711:+|nuORF'] 7761 8559 ASRDKTLRIWD True NCI_RA007_Epitope_Rep1 1359.72589735407 1359.72424490379 37.295 3 -1.1853693683150435 0.36687439897091334 1.0 ['nc|ENSG00000176871|Q9NYS7-2|WSB2', 'ENSG00000176871|ENST00000315436|WSB2'] 72020 5410 METDLEVRLR True H1975_Epitope_Rep3 1260.6496211793199 1260.64852993586 25.871 2 -1.1853801238020316 0.36687439897091334 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 35364 3233 GRYSREFFNR True NCI_RA007_Epitope_Rep2 1330.6530667669797 1330.65142490379 17.231 3 -1.185465917505315 0.36687439897091334 1.0 ['nc|ENSG00000184343|Q9UPE1-2|SRPK3', 'nc|ENSG00000184343|Q9UPE1-3|SRPK3', 'nc|ENSG00000184343|Q9UPE1-4|SRPK3', 'ENSG00000184343|ENST00000370101|SRPK3'] 10915 5428 DAAPTVDLNRV True H1975_Epitope_Rep3 1169.60405088589 1169.6029499358601 25.938 2 -1.1855028009903956 0.36687772407677993 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323'] 39930 14183 HPHLQEAGRAV True PC9_epitope_Rep1 1213.63160304641 1213.62994490379 59.377 3 -1.185540785877557 0.36687772407677993 1.0 ['ENST00000539253.5_1_1:205306132-205306279:-|nuORF'] 20068 6514 EMECHEYMRRR True H1975_Epitope_Rep1 1538.6540720200999 1538.65243490379 30.116 3 -1.1855618717680323 0.36688563079151787 1.0 ['ENSG00000142609|ENST00000682832|CFAP74', 'CFAP74|p.R386Sfs*4|1|0.77|ENSG00000142609|chr1:1968722-1968722|C/-|frameshift_variant', 'ENST00000270720.11_1_1:1887019-1905630:-|nuORF', 'nc|ENSG00000142609|Q9C0B2-2|CFAP74', 'nc|ENSG00000142609|Q9C0B2|CFAP74'] 87129 20362 QNYVLKWDYTY True H1975_Epitope_Rep1 1491.7034305739899 1491.70232993586 84.689 2 -1.1855877577419403 0.36688769839783214 1.0 ['nc|ENSG00000142166|P17181-2|IFNAR1', 'nc|ENSG00000142166|P17181-4|IFNAR1', 'nc|ENSG00000142166|P17181-3|IFNAR1', 'ENSG00000142166|ENST00000270139|IFNAR1'] 141750 17762 YTYPYAYYMES True H1975_Epitope_Rep2 1449.5798698536498 1449.57876993586 73.641 2 -1.1856021799568928 0.36688769839783214 1.0 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2'] 43405 6956 IGENWPTRVR True NCI_RA007_Epitope_Rep1 1226.6520041378199 1226.65090993586 31.061 2 -1.1856155208992742 0.36688769839783214 1.0 ['ENSG00000021776|ENST00000156471|AQR'] 59718 12540 LGCWFYSSRFP True PC9_epitope_Rep1 1361.6226781554901 1361.6215899358601 53.105 2 -1.1856250580021832 0.36688769839783214 1.0 ['ENSG00000204070|ENST00000243918|SYS1', 'ENST00000457307.1_1_20:43994210-43995752:+|nuORF'] 127927 17952 VPGVLAVAP True PC9_epitope_Rep1 821.50108938749 821.5005449679301 73.843 1 -1.185656713235587 0.36688769839783214 1.0 ['ENST00000337304.2_1_22:39916921-39917209:+|nuORF'] 130411 6309 VSLREDVPPG True NCI_RA007_Epitope_Rep2 1067.56112344475 1067.56002993586 29.146 2 -1.185685183459538 0.3669080919080919 1.0 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 91075 5688 RFLQWTELLDP True NCI_RA007_Epitope_Rep2 1416.7401504358797 1416.73849490379 26.738 3 -1.1857080439893577 0.3669114157988062 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'ENST00000461438.5_1_10:120917240-120925159:-|nuORF'] 135772 10270 WM[Oxidation]MARHWASV True H1975_Epitope_Rep3 1289.57976817813 1289.57866993586 44.554 2 -1.18571440968982 0.3669114157988062 1.0 ['ENST00000494946.6_1_16:2822040-2825556:-|nuORF'] 31720 9262 GEGPRERREGP True H1975_Epitope_Rep3 1238.6115958778198 1238.6104899358602 40.618 2 -1.1857509726943127 0.3669193212042506 1.0 ['ENST00000333602.10_1_3:195635568-195635940:-|nuORF'] 80322 19797 PGGGFGGG True NCI_RA007_Epitope_Rep5 604.26052476896 604.25997496793 83.06 1 -1.1858430788288181 0.3669646870785675 1.0 ['CON__Q6IFZ6'] 123447 7966 VGNSSDFY True NCI_RA007_Epitope_Rep4 887.3661120363099 887.36500993586 37.394 2 -1.1858566169282967 0.36697007154361916 1.0 ['ENST00000503240.5_1_5:148743537-148748214:+|nuORF', 'ENSG00000145882|ENST00000274569|PCYOX1L', 'ENST00000505669.5_1_5:148737686-148748214:+|nuORF'] 74340 15576 NEPQETIYSKK True PC9_epitope_Rep4 1335.6670450652698 1335.66594993586 67.834 2 -1.1858819820563586 0.36697007154361916 1.0 ['ENSG00000133962|ENST00000256343|CATSPERB', 'nc|ENSG00000133962|Q9H7T0-2|CATSPERB'] 80287 20194 PGELQQQSDTS True H1975_Epitope_Rep3 1188.5258601348398 1188.5242049037902 84.466 3 -1.1859085060158874 0.36697007154361916 1.0 ['nc|ENSG00000144857|Q9BWV1|BOC', 'ENSG00000144857|ENST00000682979|BOC'] 142388 8740 YYELWWFWLLW True NCI_RA007_Epitope_Rep1 1703.8176724805896 1703.81602490379 37.999 3 -1.1859380230672705 0.36697007154361916 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 56556 11552 LDGPYFHPV True PC9_epitope_Rep6 1043.50763131991 1043.50652993586 55.536 2 -1.185939379074131 0.36697007154361916 1.0 ['FER1L6|p.G1497V|1|0.16|ENSG00000214814|chr8:124091521-124091521|G/T|missense_variant'] 48463 23747 KAARVKFRR True NCI_RA007_Epitope_Rep3 1130.7148791778998 1130.7137899358602 102.94 2 -1.1860366934152469 0.36697007154361916 1.0 ['ENST00000476624.1_1_9:130688065-130688256:-|nuORF'] 88742 9578 QTLRWQRWQRR True NCI_RA007_Epitope_Rep2 1612.8811096391998 1612.8794549037902 41.87 3 -1.1861270147486702 0.36697007154361916 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 43953 7318 IIDYIFYSKPQ True NCI_RA007_Epitope_Rep1 1385.72310338941 1385.7220099358601 32.458 2 -1.1861903982343702 0.36697339343013746 1.0 ['ENSG00000113300|ENST00000261951|CNOT6'] 3384 3407 AGHQAMHYSRP True NCI_RA007_Epitope_Rep2 1253.57237391813 1253.57126993586 17.909 2 -1.186197367511562 0.36697339343013746 1.0 ['nc|ENSG00000112425|O95278-5|EPM2A'] 37013 8241 GVPADQLRVIF True PC9_epitope_Rep6 1213.68190728377 1213.68025490379 41.283 3 -1.186217442191139 0.36697671515075847 1.0 ['nc|ENSG00000185345|O60260-6|PRKN', 'nc|ENSG00000185345|O60260-7|PRKN', 'nc|ENSG00000185345|O60260-5|PRKN', 'nc|ENSG00000185345|O60260-8|PRKN', 'nc|ENSG00000185345|O60260-2|PRKN', 'ENSG00000185345|ENST00000366898|PRKN'] 59488 8117 LFQVNQWLTWL True H1975_Epitope_Rep1 1446.7659712608997 1446.7648699358601 36.166 2 -1.1862274699344448 0.36697671515075847 1.0 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000525606.5_1_11:10819365-10820979:-|nuORF'] 109235 17934 TARRGLSHR True NCI_RA007_Epitope_Rep4 1052.59515796804 1052.59406993586 77.603 2 -1.1862524006501143 0.3669846184578506 1.0 ['ENST00000264956.10_2_4:5813382-5814396:+|nuORF', 'ENST00000264956.10_2_4:5813500-5814718:+|nuORF'] 106342 7865 STGYDPVKL True H1975_Epitope_Rep3 978.5022115862998 978.50110993586 35.228 2 -1.1863538665471443 0.36701290918624685 1.0 ['ENSG00000126261|ENST00000246548|UBA2', 'nc|ENSG00000126261|Q9UBT2-2|UBA2'] 116376 21283 TTGKRTIKT True H1975_Epitope_Rep2 1004.5978433066399 1004.59674993586 88.076 2 -1.1863649778715641 0.36701290918624685 1.0 ['nc|ENSG00000111364|Q8NHQ9-2|DDX55', 'ENSG00000111364|ENST00000238146|DDX55'] 46834 6325 ITIDPPECQG True PC9_epitope_Rep2 1071.4906609264299 1071.4895699358601 29.725 2 -1.1863853868559506 0.36702081174546497 1.0 ['CACNA1G|p.S2318C|1|0.19|ENSG00000006283|chr17:50626569-50626569|A/T|missense_variant'] 137482 10357 YEEEGTPLRY True H1975_Epitope_Rep2 1255.5720820512697 1255.57098993586 44.846 2 -1.1864703879070593 0.3670320341564505 1.0 ['nc|ENSG00000163362|Q3KP66|INAVA', 'ENSG00000163362|ENST00000413687|INAVA', 'ENST00000487626.1_1_3:111904329-111904731:-|nuORF'] 3776 10358 AGTAPSCRNHI True H1975_Epitope_Rep2 1125.53492578025 1125.53382993586 44.85 2 -1.1864713600584347 0.3670320341564505 1.0 ['nc|ENSG00000262246|P57737-2|CORO7', 'nc|ENSG00000262246|P57737-4|CORO7', 'ENSG00000262246|ENST00000251166|CORO7', 'nc|ENSG00000262246|P57737-3|CORO7', 'ENST00000571227.5_1_16:4438053-4465766:-|nuORF'] 22996 6132 EVEYYYQRALE True NCI_RA007_Epitope_Rep2 1461.6776097489699 1461.6765099358602 28.459 2 -1.186483473553241 0.3670320341564505 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 64738 13962 LPWYSKYFPYL True NCI_RA007_Epitope_Rep1 1475.74892421443 1475.7478299358602 58.333 2 -1.1865307761219053 0.3670386737572716 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 105647 13204 SSEEDYGEFEF True H1975_Epitope_Rep1 1337.4935569470497 1337.4924499358601 55.885 2 -1.1865342632741824 0.3670386737572716 1.0 ['CON__Q28107'] 49568 19377 KFRAHRVVKR True NCI_RA007_Epitope_Rep4 1295.8050911646299 1295.8034549037902 83.799 3 -1.1865511149824541 0.3670386737572716 1.0 ['ENST00000442009.6_1_9:37489340-37503196:+|nuORF', 'ENSG00000137054|ENST00000377798|POLR1E', 'nc|ENSG00000137054|Q9GZS1-1|POLR1E'] 3104 19811 AGAFVLDPMC True H1975_Epitope_Rep3 1022.4565243471799 1022.45542993586 82.944 2 -1.1865735452078139 0.3670386737572716 1.0 ['ENSG00000138050|ENST00000505747|THUMPD2', 'ENST00000460072.5_1_2:39963877-39988481:-|nuORF'] 102140 14850 SLRQQLDEL True PC9_epitope_Rep3 1100.5825871653199 1100.5814899358602 62.257 2 -1.1866003450873237 0.3670465752056624 1.0 ['nc|ENSG00000182253|O15061-2|SYNM', 'SYNM|p.A1442Efs*7|1|0.45|ENSG00000182253|chr15:99132685-99132685|C/-|frameshift_variant', 'ENSG00000182253|ENST00000336292|SYNM', 'nc|ENSG00000182253|O15061-3|SYNM'] 125368 11379 VIRGGATR True NCI_RA007_Epitope_Rep3 828.49298431528 828.49188993586 51.88 2 -1.1866498934259062 0.3670669596045339 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 53344 23344 KQPKIRHRI True PC9_epitope_Rep6 1174.74109392574 1174.7399899358602 102.9 2 -1.1867321058050373 0.36708734349448874 1.0 ['nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8', 'ENSG00000153339|ENST00000283351|TRAPPC8'] 78688 11987 NYYSTLSFT True PC9_epitope_Rep1 1094.49204082542 1094.49094993586 50.971 2 -1.1868078116968683 0.3671110445376473 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 124049 8809 VGSITETL True PC9_epitope_Rep1 818.43854870058 818.43744993586 38.726 2 -1.1868526986179921 0.3671110445376473 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 67878 16156 LTASPRLTL True PC9_epitope_Rep3 970.58113061334 970.58002993586 67.289 2 -1.1868581471068238 0.3671110445376473 1.0 ['ENST00000527285.1_1_11:18728401-18728901:+|nuORF'] 12213 17808 DIGVFLSKRI True PC9_epitope_Rep3 1146.67609362734 1146.6749899358601 73.696 2 -1.1868812207316972 0.3671380605863924 1.0 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'RBPJ|p.G458Afs*21|1|0.1|ENSG00000168214|chr4:26430853-26430854|-/GCGGCCACATTGCAGTGCAGCA|frameshift_variant', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ', 'ENST00000506903.1_1_4:26422193-26426401:+|nuORF', 'ENST00000511451.5_1_4:26364233-26422385:+|nuORF'] 82196 21398 PNWDFHNHE True PC9_epitope_Rep3 1194.48427010638 1194.48262490379 87.606 3 -1.1868993955995373 0.3671380605863924 1.0 ['nc|ENSG00000172014|Q4UJ75|ANKRD20A4P', 'ENSG00000260691|ENST00000562196|ANKRD20A1'] 121490 16447 VEYNGCRKAF True PC9_epitope_Rep2 1185.5600778989299 1185.5589899358602 68.504 2 -1.1869003725514662 0.3671380605863924 1.0 ['ENSG00000147117|ENST00000377073|ZNF157'] 141459 19587 YTGPRLYK True PC9_epitope_Rep2 996.5392658013599 996.53816993586 80.724 2 -1.18692832625527 0.3671380605863924 1.0 ['ENST00000595692.1_1_19:7679981-7682940:+|nuORF', 'ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 78752 5386 PAAGKGAVR True PC9_epitope_Rep1 825.48208527841 825.48098993586 25.552 2 -1.1869387669543543 0.3671380605863924 1.0 ['ENST00000394071.6_2_14:74184720-74184954:-|nuORF'] 141078 18411 YSPIRKRR True NCI_RA007_Epitope_Rep4 1074.6410455313 1074.6399499358602 79.676 2 -1.1869900205110977 0.3671413772014129 1.0 ['nc|ENSG00000177679|A6NNA2|SRRM3', 'ENSG00000177679|ENST00000611745|SRRM3'] 27632 23802 FPCPGCEH True H1975_Epitope_Rep1 888.3258445307999 888.32474993586 98.803 2 -1.1869999301435556 0.3671413772014129 1.0 ['ENSG00000152503|ENST00000513154|TRIM36', 'nc|ENSG00000152503|Q9NQ86|TRIM36'] 45813 10378 ISDEFSEVIK True PC9_epitope_Rep5 1165.58666948625 1165.5855699358601 44.903 2 -1.187030809627387 0.36714469365085306 1.0 ['ENSG00000110047|ENST00000320631|EHD1', 'EHD3|p.K324Rfs*33|1|0.24|ENSG00000013016|chr2:31261600-31261600|G/-|frameshift_variant', 'EHD3|p.Q392Sfs*5|1|0.17|ENSG00000013016|chr2:31266268-31266268|C/-|frameshift_variant', 'ENSG00000013016|ENST00000322054|EHD3'] 123541 9705 VGPPLLTP True NCI_RA007_Epitope_Rep5 792.4745402864801 792.47344993586 43.965 2 -1.187063245089283 0.36714469365085306 1.0 ['ENSG00000104941|ENST00000221538|RSPH6A'] 120810 11519 VELKPHDVR True PC9_epitope_Rep4 1091.60874234351 1091.60764993586 52.07 2 -1.1871106287296456 0.3671650732632735 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 14677 7883 DVHFLDAR True NCI_RA007_Epitope_Rep1 971.4824792012299 971.48138993586 34.656 2 -1.1874683136827011 0.36728071489191755 1.0 ['ENST00000489692.1_2_1:235492468-235492705:+|nuORF'] 56750 14483 LDLNGNNITR True PC9_epitope_Rep4 1128.58873517492 1128.5876299358601 63.619 2 -1.1874762544835242 0.36728071489191755 1.0 ['ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 102137 6096 SLRQAGTAVP True NCI_RA007_Epitope_Rep5 998.5508931142199 998.54978993586 30.13 2 -1.187678786475314 0.3673576358122527 1.0 ['ENSG00000101997|ENST00000376227|CCDC22'] 32326 11052 GFFGYVHFR True PC9_epitope_Rep4 1128.5504991913997 1128.5488649037902 50.287 3 -1.1876877089195288 0.3673576358122527 1.0 ['nc|ENSG00000140506|Q9HAT1-3|LMAN1L', 'ENSG00000140506|ENST00000309664|LMAN1L'] 116019 12860 TSLRPSPSL True PC9_epitope_Rep1 956.52909504048 956.52798993586 54.34 2 -1.1877118470985697 0.3673576358122527 1.0 ['ENST00000285689.7_2_5:125758923-125759271:+|nuORF'] 13794 8925 DQIRQSVRHSL True H1975_Epitope_Rep1 1337.71639529953 1337.71528993586 39.235 2 -1.1877291838421749 0.3673576358122527 1.0 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant'] 67569 7461 LSTSRRHRRRW True H1975_Epitope_Rep1 1509.85014386409 1509.84850490379 33.696 3 -1.1877645804710997 0.3673576358122527 1.0 ['ENST00000263864.9_1_2:85808699-85808759:+|nuORF'] 72764 17326 MNSVTVEEGYV True PC9_epitope_Rep5 1226.54890407854 1226.5472549037902 71.643 3 -1.1878343159293923 0.36737215164599296 1.0 ['nc|ENSG00000070785|Q9NR50-2|EIF2B3'] 10361 15 CGGDPHSC True H1975_Epitope_Rep2 774.2425088296601 774.24140993586 0.065234 2 -1.1878392812470577 0.36737215164599296 1.0 ['LRP1|p.R3014C|1|0.09|ENSG00000123384|chr12:57197129-57197129|C/T|missense_variant'] 48711 3381 KCVELTEG True PC9_epitope_Rep2 877.4215187374499 877.4204299358599 18.275 2 -1.1878959156741589 0.36737215164599296 1.0 ['ENSG00000113328|ENST00000340828|CCNG1', 'nc|ENSG00000113328|P51959-2|CCNG1'] 46015 8283 ISGFSGKG True PC9_epitope_Rep1 751.3864535580699 751.3859049679301 36.694 1 -1.1879213820947774 0.36737215164599296 1.0 ['DDX46|p.S770I|1|0.17|ENSG00000145833|chr5:134811718-134811718|G/T|missense_variant'] 1757 5742 AEGRSLASV True PC9_epitope_Rep2 888.46649478392 888.46538993586 27.478 2 -1.1879242076263972 0.36737215164599296 1.0 ['ENST00000205194.4_1_19:55998332-55998500:+|nuORF'] 15017 6257 DYKYKQGYR True NCI_RA007_Epitope_Rep3 1219.5985715826298 1219.59691490379 31.615 3 -1.18796090259732 0.3673741873494803 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant'] 40019 2515 HPRWVLTAAHC True NCI_RA007_Epitope_Rep1 1289.64514493557 1289.64349490379 13.279 3 -1.1879857544526657 0.3673741873494803 1.0 ['ENST00000506153.5_1_16:2889871-2891732:-|nuORF', 'ENST00000475030.5_2_16:2889871-2891732:-|nuORF'] 77452 10982 NSVALEIQQLL True H1975_Epitope_Rep3 1226.68705223386 1226.6859499358602 47.332 2 -1.1880169562071419 0.3673741873494803 1.0 ['ENSG00000205108|ENST00000378788|FAM205A'] 41960 7086 IDEHVTLVAWL True H1975_Epitope_Rep1 1294.6921376142998 1294.69104993586 32.283 2 -1.188029964995775 0.3673741873494803 1.0 ['IGLON5|p.R62L|1|0.24|ENSG00000142549|chr19:51323688-51323688|G/T|missense_variant'] 34774 5413 GQGATANVFR True PC9_epitope_Rep1 1019.5148419586699 1019.51374993586 25.655 2 -1.188034419309223 0.3673741873494803 1.0 ['ENSG00000183735|ENST00000331710|TBK1'] 22135 6847 ESRPAEVPA True NCI_RA007_Epitope_Rep4 954.4770594676198 954.47596993586 32.958 2 -1.188069506585324 0.36738997516876504 1.0 ['ENSG00000173442|ENST00000309295|EHBP1L1', 'EHBP1L1|p.L1411Rfs*31|1|0.26|ENSG00000173442|chr11:65590541-65590541|T/-|frameshift_variant'] 92294 20358 RLLGIPLL True PC9_epitope_Rep2 893.6062231623699 893.60512993586 83.729 2 -1.1880736603392528 0.36738997516876504 1.0 ['ENSG00000154114|ENST00000683345|TBCEL'] 102117 10857 SLRLSTPV True PC9_epitope_Rep1 871.51271670035 871.51160993586 46.647 2 -1.1882017982476802 0.36744650321292655 1.0 ['ADGRG4|p.V2200*|1|0.54|ENSG00000156920|chrX:136350301-136350301|G/-|frameshift_variant', 'nc|ENSG00000156920|Q8IZF6-2|ADGRG4', 'nc|ENSG00000156920|Q8IZF6-3|ADGRG4', 'ENSG00000156920|ENST00000394143|ADGRG4', 'ADGRG4|p.V1528Sfs*3|1|0.13|ENSG00000156920|chrX:136348281-136348282|-/A|frameshift_variant', 'ADGRG4|p.N1622Kfs*62|1|0.8|ENSG00000156920|chrX:136348564-136348565|-/C|frameshift_variant'] 60989 7574 LIEEGVDVP True NCI_RA007_Epitope_Rep2 969.5018772331298 969.50078993586 34.087 2 -1.1882938422832514 0.36744650321292655 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF'] 11095 21032 DCLLAQKV True NCI_RA007_Epitope_Rep4 888.47388866348 888.47278993586 91.166 2 -1.1883005748572024 0.36744650321292655 1.0 ['ENSG00000279804|ENST00000624297|PRAMEF18', 'ENSG00000204480|ENST00000376101|PRAMEF19'] 37662 15353 GVWYKYQPL True PC9_epitope_Rep4 1152.59678067748 1152.59512490379 66.987 3 -1.188305854783958 0.36744650321292655 1.0 ['nc|ENSG00000151572|Q32M45-2|ANO4', 'ENSG00000151572|ENST00000392977|ANO4'] 126992 19875 VLRSWWPRWWW True H1975_Epitope_Rep3 1656.8466216234397 1656.8455299358602 83.206 2 -1.1883434046339565 0.36745439572779676 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 136044 20303 WREFPDRLVGY True H1975_Epitope_Rep3 1436.72008369764 1436.71898993586 84.903 2 -1.1883985268601662 0.36747476511909366 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 128938 12361 VQIEHISSL True PC9_epitope_Rep6 1024.5553097883198 1024.5542099358602 58.951 2 -1.1885026100728149 0.3675076109197984 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'NF1-PSMD11|1|fusion'] 8488 17730 ATRTQKKK True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58650993586 74.979 2 -1.1886529308971499 0.3675590040417145 1.0 ['nc|ENSG00000170802|P32314-2|FOXN2'] 18473 11312 EKEALKQEVM-[Oxidation] True H1975_Epitope_Rep1 1219.6118390687097 1219.6107499358602 48.489 2 -1.1886631130013623 0.3675590040417145 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 124782 6275 VHDWLYYYAYK True PC9_epitope_Rep2 1519.7136013348702 1519.71196490379 29.533 3 -1.1887941473552956 0.3675590040417145 1.0 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 123697 5927 VGRAPKQA True PC9_epitope_Rep5 825.48208527841 825.48098993586 27.793 2 -1.18885135809972 0.3675590040417145 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 91692 10710 RKAAPRIEW True PC9_epitope_Rep5 1125.6407111781298 1125.63907490379 46.186 3 -1.1888927160977856 0.3675590040417145 1.0 ['ENST00000503849.5_1_5:175815432-175815552:-|nuORF'] 60693 8127 LHPAPPNGL True PC9_epitope_Rep4 914.49740098938 914.49630993586 38.715 2 -1.188940126475377 0.3675590040417145 1.0 ['nc|ENSG00000119535|Q99062-4|CSF3R'] 129382 8123 VRDTQAVRHYK True NCI_RA007_Epitope_Rep2 1371.7371307441101 1371.7360299358602 36.23 2 -1.1889634362389856 0.3675590040417145 1.0 ['ENSG00000101213|ENST00000542869|PTK6'] 84314 8779 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 38.609 2 -1.1889702664626456 0.3675590040417145 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 137339 11902 YDLKLPIW True NCI_RA007_Epitope_Rep1 1046.5800679841798 1046.5789699358602 50.28 2 -1.1889946703231176 0.3675590040417145 1.0 ['nc|nan|Q8N4M7|C10orf126'] 32794 3572 GHFHGPWC True PC9_epitope_Rep3 939.3809913381499 939.37988993586 18.861 2 -1.1890468252570572 0.3675590040417145 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 21119 5462 ERAHSVDPRD True H1975_Epitope_Rep3 1180.5584976757998 1180.55686490379 26.065 3 -1.1890826980170566 0.3675590040417145 1.0 ['ENSG00000178752|ENST00000546354|ERFE'] 65513 12357 [Acetylation]-LRPC[Carbamidomethyl]CGGPVT True H1975_Epitope_Rep2 1100.5106857740898 1100.51017496793 52.616 1 -1.1890995039857744 0.3675590040417145 1.0 ['ENST00000285124.12_1_18:9547789-9562973:-|nuORF'] 53484 11434 KRIDNLLKYFY True NCI_RA007_Epitope_Rep3 1471.81873510975 1471.8170849037901 52.098 3 -1.1891029444437053 0.3675590040417145 1.0 ['ENST00000477822.2_1_6:153291978-153292182:-|nuORF'] 59387 9550 LFLKKVSVP True NCI_RA007_Epitope_Rep5 1029.65865265805 1029.65754993586 43.371 2 -1.1891145716306104 0.3675590040417145 1.0 ['ENST00000570069.5_1_16:1827428-1828166:+|nuORF'] 92089 3633 RKWMRRKMGK True PC9_epitope_Rep4 1375.7805332929095 1375.7788949037902 20.09 3 -1.1891197402714289 0.3675590040417145 1.0 ['nc|ENSG00000214595|Q6ZMW3-2|EML6', 'ENST00000490828.5_1_2:55184973-55193987:+|nuORF'] 88793 6118 QTSQVLTAV True PC9_epitope_Rep2 945.5131106231698 945.51200993586 28.928 2 -1.1891200885174 0.3675590040417145 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 77060 21714 NRKLIYNFK True PC9_epitope_Rep6 1194.6873270173799 1194.68569490379 96.409 3 -1.189380364950719 0.36767787645943517 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 32545 27299 GGGGGGGG True PC9_epitope_Rep1 474.18227444826005 474.18172496793 111.55 1 -1.189421370558264 0.36767787645943517 1.0 ['CON__Q6IFZ6', 'ENST00000258111.4_1_12:70760395-70760632:+|nuORF', 'KCNN2|p.I174Sfs*11|1|0.09|ENSG00000080709|chr5:114363937-114363937|T/-|frameshift_variant', 'ENSG00000103241|ENST00000262426|FOXF1', 'nc|ENSG00000168779|O60902-3|SHOX2', 'ENSG00000123364|ENST00000243056|HOXC13', 'ENST00000556170.5_1_14:75553702-75572727:-|nuORF', 'nc|ENSG00000165655|Q96F45-3|ZNF503', 'ENSG00000185960|ENST00000686671|SHOX', 'ENSG00000168779|ENST00000483851|SHOX2', 'ENST00000591649.5_1_19:10797828-10799985:+|nuORF', 'ENST00000555405.5_1_14:75551269-75558248:-|nuORF', 'nc|ENSG00000168779|O60902|SHOX2', 'ENST00000216019.11_1_22:38881942-38884127:-|nuORF', 'ENSG00000152284|ENST00000282111|TCF7L1', 'KCNN2|p.E429Kfs*4|1|0.3|ENSG00000080709|chr5:114487078-114487078|G/-|frameshift_variant', 'ENSG00000080709|ENST00000673685|KCNN2', 'nc|ENSG00000080709|Q9H2S1|KCNN2', 'ENSG00000143869|ENST00000272224|GDF7', 'ENSG00000108091|ENST00000263102|CCDC6', 'nc|ENSG00000062524|P29376-3|LTK', 'ENST00000563518.5_1_15:41799676-41805922:-|nuORF', 'ENST00000589239.5_1_19:14080804-14104655:-|nuORF', 'ENST00000587928.5_1_19:10794459-10799985:+|nuORF', 'ENST00000372324.5_1_1:44445001-44445064:+|nuORF', 'ENST00000426595.1_1_7:55955154-55973975:+|nuORF', 'ENST00000317216.2_1_8:22550456-22550672:-|nuORF', 'ENST00000345425.6_1_19:14593738-14606936:-|nuORF', 'ENST00000507703.1_1_4:124319460-124322783:+|nuORF', 'ENST00000377560.9_1_12:112820080-112820209:-|nuORF', 'ENST00000373132.3_1_1:36851434-36851494:-|nuORF', 'SRSF11|p.G18V|1|0.1|ENSG00000116754|chr1:70221689-70221689|G/T|missense_variant', 'ENST00000371142.8_1_10:98346624-98346687:-|nuORF', 'FBL|p.G44V|1|0.21|ENSG00000105202|chr19:39840667-39840667|C/A|missense_variant', 'ENST00000491491.1_1_13:77900653-77900983:-|nuORF', 'CXXC4|p.G164_G165insS|1|0.24|ENSG00000168772|chr4:104491310-104491311|-/GCT|inframe_insertion', 'ENST00000393033.8_1_19:14603704-14606936:-|nuORF', 'ENST00000252674.8_2_19:6279890-6279947:-|nuORF', 'ENST00000555993.6_1_14:71267787-71275967:-|nuORF', 'HCN1|p.D209Tfs*4|1|0.22|ENSG00000164588|chr5:45645409-45645409|C/-|frameshift_variant', 'nc|ENSG00000162923|Q9H7D7-3|WDR26', 'nc|ENSG00000178233|Q8IW70-2|TMEM151B', 'ENST00000489107.1_1_9:12775714-12777225:+|nuORF', 'nc|ENSG00000162923|Q9H7D7-4|WDR26', 'nc|ENSG00000292354|O15266-2|SHOX', 'ENST00000608721.1_1_6:161412512-161413208:-|nuORF', 'ENST00000229416.10_1_6:53409297-53409843:-|nuORF', 'ENST00000481580.1_1_20:32664521-32665129:+|nuORF', 'nc|ENSG00000162367|P17542-3|TAL1', 'ENST00000607598.2_1_8:9413493-9414024:-|nuORF', 'ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENST00000542519.1_1_12:6782380-6787618:-|nuORF', 'ENSG00000205922|ENST00000382349|ONECUT3', 'YEATS2|p.G812A|1|0.16|ENSG00000163872|chr3:183775981-183775981|G/C|missense_variant', 'ENST00000378279.3_1_8:117950559-117950772:+|nuORF', 'nc|ENSG00000130224|Q5VUJ6-2|LRCH2', 'ENSG00000119547|ENST00000491143|ONECUT2', 'nc|ENSG00000179915|P58400|NRXN1', 'nc|ENSG00000179915|P58400-1|NRXN1', 'ENSG00000205476|ENST00000380243|CCDC85C', 'ENST00000370544.9_1_1:87794323-87794602:+|nuORF', 'ENSG00000130224|ENST00000317135|LRCH2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'ENSG00000104824|ENST00000221419|HNRNPL', 'ENSG00000169083|ENST00000374690|AR', 'nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF', 'ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF', 'ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.A1643Hfs*5|1|0.12|ENSG00000155816|chr1:240438076-240438076|G/-|frameshift_variant', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENSG00000126247|ENST00000246533|CAPNS1', 'ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF', 'CON__Q3TTY5', 'nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'ENST00000567567.5_1_15:31233675-31258111:-|nuORF', 'DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000303538.12_1_4:39929740-39979529:-|nuORF', 'ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000120093|ENST00000498678|HOXB3', 'HOXB3|p.P289Rfs*140|1|0.29|ENSG00000120093|chr17:48550764-48550764|G/-|frameshift_variant', 'WIPF1|p.G89D|1|0.07|ENSG00000115935|chr2:174575296-174575296|C/T|missense_variant', 'HOXB3|p.S181C|1|0.22|ENSG00000120093|chr17:48551089-48551089|T/A|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ALK|p.Y826Tfs*5|1|0.08|ENSG00000171094|chr2:29233577-29233577|G/-|frameshift_variant', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000203782|ENST00000368742|LORICRIN', 'nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant', 'nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1', 'ENSG00000166233|ENST00000379887|ARIH1', 'ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF', 'ENSG00000177733|ENST00000314940|HNRNPA0', 'ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF', 'ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1', 'ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF', 'ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF', 'ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1', 'nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27', 'DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36', 'DHX36|p.G235Afs*25|1|0.5|ENSG00000174953|chr3:154309762-154309762|C/-|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'nc|ENSG00000137449|Q7Z5Q1-8|CPEB2', 'ENSG00000137449|ENST00000538197|CPEB2', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000181588|ENST00000402693|MEX3D', 'nc|ENSG00000181588|Q86XN8-2|MEX3D', 'nc|ENSG00000181588|Q86XN8-3|MEX3D', 'ENSG00000178233|ENST00000451188|TMEM151B', 'ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000273047.8_1_3:19988696-19992457:+|nuORF', 'nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3', 'nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'AEBP2-PLEKHA5|3|fusion', 'AEBP2-PLEKHA5|2|fusion', 'AEBP2-PLEKHA5|4|fusion', 'AEBP2-PLEKHA5|10|fusion', 'AEBP2-PLEKHA5|1|fusion', 'AEBP2-PLEKHA5|9|fusion', 'nc|ENSG00000139154|Q6ZN18|AEBP2', 'ENSG00000139154|ENST00000266508|AEBP2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000132005|ENST00000254325|RFX1', 'ENSG00000153714|ENST00000319264|LURAP1L', 'ENSG00000138606|ENST00000690270|SHF', 'ENSG00000185129|ENST00000331327|PURA', 'ENST00000301015.13_2_16:88800318-88802577:-|nuORF', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENST00000307790.7_3_22:30221719-30234222:-|nuORF', 'ENSG00000100599|ENST00000216487|RIN3', 'ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'ENST00000238855.11_1_2:64751466-64751667:+|nuORF', 'IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'nc|ENSG00000062524|P29376-5|LTK', 'ENSG00000182968|ENST00000330949|SOX1', 'ENSG00000164588|ENST00000303230|HCN1', 'ENSG00000151615|ENST00000281321|POU4F2', 'ENSG00000169991|ENST00000455833|IFFO2', 'ENSG00000119919|ENST00000344586|NKX2-3', 'ADCY1|p.L707Wfs*35|1|0.37|ENSG00000164742|chr7:45686005-45686005|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1', 'ENSG00000142408|ENST00000270458|CACNG8', 'nc|ENSG00000162367|P17542-2|TAL1', 'ENSG00000162367|ENST00000691006|TAL1', 'nc|ENSG00000160201|Q01081-4|U2AF1', 'nc|ENSG00000160201|Q01081-2|U2AF1', 'ENSG00000160201|ENST00000291552|U2AF1', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000162923|Q9H7D7-2|WDR26', 'nc|ENSG00000162923|Q9H7D7|WDR26', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000153266|Q8TBJ5-2|FEZF2', 'ENSG00000153266|ENST00000283268|FEZF2', 'ENSG00000061455|ENST00000407847|PRDM6', 'nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2', 'ENSG00000103489|ENST00000261381|XYLT1', 'ENSG00000128709|ENST00000249499|HOXD9', 'nc|ENSG00000165655|Q96F45-2|ZNF503', 'ENSG00000165655|ENST00000372524|ZNF503', 'ENSG00000171262|ENST00000397609|FAM98B', 'ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1', 'nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB', 'nc|ENSG00000100106|Q9H2D6-6|TRIOBP'] 88903 10655 QVEQLKQEVSR True NCI_RA007_Epitope_Rep1 1342.7204776204599 1342.7193899358601 45.436 2 -1.1894285786873877 0.36767787645943517 1.0 ['ENSG00000204103|ENST00000373313|MAFB'] 94250 19403 RRQRLEEAK True H1975_Epitope_Rep1 1184.6738022115599 1184.6727099358602 80.814 2 -1.189440041500263 0.36767787645943517 1.0 ['BSN|p.G2876Dfs*18|1|0.14|ENSG00000164061|chr3:49658178-49658178|G/-|frameshift_variant', 'BSN|p.G3480Afs*7|1|0.72|ENSG00000164061|chr3:49662282-49662282|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 138645 15898 YIGLKETNR True PC9_epitope_Rep2 1092.5927579262 1092.5916699358602 66.405 2 -1.1894934832728323 0.367685763823922 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 67443 8272 LSSQDEEEQD True H1975_Epitope_Rep1 1178.4575057915 1178.4564099358602 36.752 2 -1.1895821392563237 0.367718597979294 1.0 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 69331 9414 LTVHPDPRTPE True H1975_Epitope_Rep3 1260.64625005104 1260.6451499358602 41.212 2 -1.1896085060753845 0.36772189791947313 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 67729 18723 LSYAGQYV True PC9_epitope_Rep4 899.4388830537499 899.43778993586 80.099 2 -1.1896348606148937 0.36772189791947313 1.0 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 66502 8874 LSHGVQTMV True PC9_epitope_Rep4 970.49060135678 970.48950993586 41.665 2 -1.1896835341708403 0.36774225736844074 1.0 ['NCAM2|p.R546L|1|0.33|ENSG00000154654|chr21:21432264-21432264|G/T|missense_variant'] 91502 25130 RHTWERPY True PC9_epitope_Rep1 1143.5573754769898 1143.55573490379 101.54 3 -1.1897069721513658 0.3677501434380223 1.0 ['ZBTB49|p.G531W|1|0.24|ENSG00000168826|chr4:4315940-4315940|G/T|missense_variant'] 113167 12191 TLPQYMNLLI True PC9_epitope_Rep2 1204.65258130144 1204.6509449037899 52.206 3 -1.1897288985129275 0.3677580293108824 1.0 ['ENST00000369044.1_1_6:107100238-107100431:+|nuORF'] 123500 6216 VGPGPSGQL True PC9_epitope_Rep2 810.42356734278 810.42246993586 29.307 2 -1.1897859371860486 0.36779415799845344 1.0 ['ENST00000339738.9_1_20:30458201-30458438:-|nuORF'] 12137 7762 DIDKHRRR True H1975_Epitope_Rep1 1094.6057226517398 1094.6046299358602 34.814 2 -1.1898160958580952 0.36779415799845344 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 111839 19663 TILTVTKFRG True NCI_RA007_Epitope_Rep3 1134.67609362734 1134.6744449037901 85.753 3 -1.1898334924127087 0.36779415799845344 1.0 ['ENSG00000187554|ENST00000642603|TLR5'] 36761 12469 GVKLKYCRYY True PC9_epitope_Rep4 1291.67471372835 1291.6736099358602 55.769 2 -1.1898765480490854 0.36780863774116707 1.0 ['nc|ENSG00000152520|Q58A45-4|PAN3', 'ENST00000503791.5_1_13:28712794-28846220:+|nuORF', 'nc|ENSG00000152520|Q58A45-3|PAN3', 'ENSG00000152520|ENST00000380958|PAN3'] 104880 14268 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 61.575 2 -1.189933061839 0.36780863774116707 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 120127 5968 VEAEKPWWQVF True H1975_Epitope_Rep1 1417.7030366511701 1417.70140490379 28.027 3 -1.1899987194364574 0.36780863774116707 1.0 ['ENSG00000262919|ENST00000576892|CCNQ', 'ENST00000428076.1_1_13:19956755-19957193:+|nuORF'] 14016 9088 DRFFWNKYMIQ True NCI_RA007_Epitope_Rep2 1546.73910489006 1546.7380099358602 39.954 2 -1.19000027785352 0.36780863774116707 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F'] 56471 7441 LDEQQKNSFN True H1975_Epitope_Rep1 1221.56257999673 1221.5614899358602 33.625 2 -1.1900352301834731 0.36780863774116707 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 135296 24594 WFWKLVPARYR True H1975_Epitope_Rep1 1520.8404736138398 1520.83936993586 101.91 2 -1.190057711407576 0.3678119349005425 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 45561 22380 IQRWRRYYLPA True PC9_epitope_Rep2 1520.83645086256 1520.8353499358602 91.578 2 -1.190064460217198 0.3678119349005425 1.0 ['ENST00000372070.7_1_1:46016515-46016749:+|nuORF'] 60348 7941 LGSPGTDER True NCI_RA007_Epitope_Rep1 930.4406739589 930.43956993586 34.881 2 -1.1901032351562784 0.3678322899259222 1.0 ['ENST00000326005.10_1_15:64980692-64980890:-|nuORF'] 7736 13792 ASPLTPCSV True PC9_epitope_Rep3 873.42660411789 873.4260549679301 58.128 1 -1.190121706170522 0.36785264444361304 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 59835 5815 LGFFFQSV True PC9_epitope_Rep6 943.4803539429098 943.47924993586 30.577 2 -1.1902727333112297 0.36787299845363397 1.0 ['ENST00000398637.9_1_12:46576929-46576956:-|nuORF'] 58026 3146 LEHRILEEEE True PC9_epitope_Rep3 1295.63574493699 1295.63410490379 17.092 3 -1.1903195943361995 0.3678933519560039 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 63762 21404 LNELPVPMV True PC9_epitope_Rep4 1010.54705360374 1010.5464749679301 90.5 1 -1.1903482191923345 0.36789994139139326 1.0 ['ENST00000368854.7_1_10:125528237-125699754:-|nuORF', 'ENSG00000121898|ENST00000241305|CPXM2'] 79603 21884 PDKTMMDGSFS True PC9_epitope_Rep2 1214.4947603306998 1214.49366993586 89.653 2 -1.1903699577471043 0.36789994139139326 1.0 ['nc|ENSG00000188992|Q6XZB0-8|LIPI', 'nc|ENSG00000188992|Q6XZB0-4|LIPI', 'nc|ENSG00000188992|Q6XZB0-5|LIPI', 'nc|ENSG00000188992|Q6XZB0-3|LIPI', 'ENSG00000188992|ENST00000681601|LIPI', 'nc|ENSG00000188992|Q6XZB0-2|LIPI'] 141756 23057 YVAAAAAAAA True PC9_epitope_Rep6 848.4392174069199 848.4386649679301 101.79 1 -1.1903745817345113 0.36789994139139326 1.0 ['LHX2|p.D185Y|1|0.12|ENSG00000106689|chr9:124015351-124015351|G/T|missense_variant'] 70295 7930 LVSALVLG True NCI_RA007_Epitope_Rep1 770.49019035062 770.48908993586 34.839 2 -1.1904253086966798 0.36789994139139326 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000583241.1_1_17:16331654-16335285:+|nuORF'] 120077 6949 VDTVWALSYLT True H1975_Epitope_Rep3 1266.6496040959798 1266.6485099358601 31.691 2 -1.1904493869686952 0.36790323586258494 1.0 ['ENSG00000186432|ENST00000334256|KPNA4', 'ENSG00000102753|ENST00000261667|KPNA3'] 4993 17997 ALHLNGNR True PC9_epitope_Rep2 893.48314790757 893.48204993586 74.529 2 -1.1904627070047946 0.36790323586258494 1.0 ['ENSG00000188937|ENST00000378220|NYX'] 135890 15990 WPLFWTYFILD True H1975_Epitope_Rep3 1499.74892421443 1499.7478299358602 66.963 2 -1.1905270837129658 0.36791899946382034 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 91594 18933 RILFIVPIYAF True NCI_RA007_Epitope_Rep3 1350.8063795208998 1350.8047349037902 82.759 3 -1.1905441560115124 0.36791899946382034 1.0 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B'] 106278 17820 STFCFHLRIF True PC9_epitope_Rep5 1269.63284891637 1269.6312149037901 73.563 3 -1.1905961687148945 0.36795181924736275 1.0 ['NCKAP1L|p.L1008Sfs*26|1|0.29|ENSG00000123338|chr12:54536192-54536192|C/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 76098 780 NMQKARELWD True NCI_RA007_Epitope_Rep1 1289.61865540421 1289.61700490379 4.1227 3 -1.1906426760711528 0.36796628555041583 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 29975 25968 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 107.45 3 -1.1906518020078667 0.36796628555041583 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 82181 18725 PNSDHGLFLV True PC9_epitope_Rep4 1097.5505587610498 1097.54946993586 80.107 2 -1.1906948867351377 0.36796628555041583 1.0 ['HSMAR1_dup583|chr14:23628624-23629718:+|1.7841419024017564|0.342314790317388|2.38|516.0|37|1|anti-sense'] 45208 17117 IPRVFTSSI True PC9_epitope_Rep4 1018.58113061334 1018.58002993586 73.843 2 -1.1906964094562207 0.36796628555041583 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 126732 26422 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 109.36 3 -1.1907466819988572 0.36796628555041583 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 122175 23518 VGAIYIRRRPR True PC9_epitope_Rep3 1355.8262205320298 1355.82512993586 95.742 2 -1.1907730824629916 0.3679866340830881 1.0 ['ENSG00000244005|ENST00000374092|NFS1', 'nc|ENSG00000244005|Q9Y697-2|NFS1', 'nc|ENSG00000244005|Q9Y697-3|NFS1', 'ENST00000480655.5_1_20:34262894-34263203:-|nuORF'] 81748 16095 PLPFLGTI True H1975_Epitope_Rep1 856.50584041476 856.50474993586 67.252 2 -1.190795141849122 0.3679945140577271 1.0 ['nc|ENSG00000021461|Q9HB55-4|CYP3A43', 'nc|ENSG00000021461|Q9HB55-3|CYP3A43', 'ENSG00000021461|ENST00000354829|CYP3A43', 'nc|ENSG00000021461|Q9HB55-2|CYP3A43', 'nc|ENSG00000021461|Q9HB55-6|CYP3A43'] 139406 11021 YLPDLSPGD True H1975_Epitope_Rep3 975.45492704071 975.4543749679301 47.481 1 -1.1908467002218899 0.3680148617310426 1.0 ['ENST00000471105.5_1_1:201965436-201974841:+|nuORF', 'ENSG00000176393|ENST00000295640|RNPEP'] 20315 7906 ENTPLVPSG True PC9_epitope_Rep5 912.4552613938799 912.45471496793 35.352 1 -1.190984903483055 0.3680227411572556 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 58830 9109 LESRDQAW True PC9_epitope_Rep2 1003.4723084403498 1003.47120993586 40.378 2 -1.191039178723778 0.36804308797127466 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 97205 3727 SDYGRRDPERN True NCI_RA007_Epitope_Rep2 1363.6228888375097 1363.62124490379 19.139 3 -1.191177697992472 0.3680575467816937 1.0 ['ADGRA3|p.G581R|1|0.33|ENSG00000152990|chr4:22420954-22420954|C/T|missense_variant'] 44919 7958 INSAAAQM True PC9_epitope_Rep5 804.37998827864 804.37888993586 35.55 2 -1.1911997589084178 0.3680575467816937 1.0 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1'] 112849 9269 TLKAKSEI True PC9_epitope_Rep2 888.5280324113199 888.52692993586 40.992 2 -1.1912082168507145 0.3680575467816937 1.0 ['nc|ENSG00000177853|Q6AHZ1-2|ZNF518A', 'ZNF518A|p.I1208Vfs*15|1|0.07|ENSG00000177853|chr10:96159943-96159944|-/GTGTTCCTTC|frameshift_variant', 'ENSG00000177853|ENST00000316045|ZNF518A'] 83142 22649 PSRDVSVTVF True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 94.656 2 -1.191214460435327 0.3680575467816937 1.0 ['ENST00000511465.1_1_4:185263030-185268908:-|nuORF'] 124136 11955 VGSRGFAR True NCI_RA007_Epitope_Rep3 848.4616841869998 848.46058993586 54.15 2 -1.1912173308233005 0.3680575467816937 1.0 ['ENST00000355221.7_3_8:54745628-54755835:-|nuORF'] 373 16023 AALAALALA True NCI_RA007_Epitope_Rep2 783.48543932335 783.48434993586 67.044 2 -1.1912421967344586 0.3680654249881567 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 126749 25402 VLPGKKKKKT True NCI_RA007_Epitope_Rep5 1125.75976368165 1125.75811490379 105.24 3 -1.1912727226876663 0.3680857694944836 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 101947 18343 SLQDRMPLL True PC9_epitope_Rep3 1071.57466533391 1071.5735699358602 75.767 2 -1.1913220467084784 0.36810481307420934 1.0 ['ENST00000351486.9_1_5:172591095-172591356:+|nuORF'] 73270 13219 MSKEQLFIFR True NCI_RA007_Epitope_Rep2 1297.68527841205 1297.68477496793 56.051 1 -1.1913239425806916 0.36810481307420934 1.0 ['ENST00000563980.5_1_16:90088575-90097598:+|nuORF'] 127885 17701 VPGIVALQ True PC9_epitope_Rep3 795.48543932335 795.48434993586 73.284 2 -1.191364452592413 0.36810481307420934 1.0 ['nc|ENSG00000293518|Q5YKI7-2|GGNBP1', 'nc|ENSG00000293518|Q5YKI7|GGNBP1'] 77058 21316 NRKLIYNFK True NCI_RA007_Epitope_Rep4 1194.6873270173799 1194.68569490379 92.403 3 -1.1913733815303786 0.36810481307420934 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 80328 15181 PGGGGKAK True NCI_RA007_Epitope_Rep3 670.37622322754 670.3756749679301 67.234 1 -1.191387232206051 0.3681126901022189 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2'] 1267 9518 AEDLERVFIP True H1975_Epitope_Rep1 1187.6186383208699 1187.61754993586 41.533 2 -1.1914697976030895 0.368142894536752 1.0 ['ENSG00000165704|ENST00000298556|HPRT1'] 74111 7328 NDTYFLVLR True NCI_RA007_Epitope_Rep4 1139.5975089534697 1139.59640993586 34.826 2 -1.1914970524629094 0.368142894536752 1.0 ['ENST00000472647.5_2_1:169336955-169337057:-|nuORF'] 80329 15715 PGGGGKAK True NCI_RA007_Epitope_Rep5 670.37622322754 670.3756749679301 67.165 1 -1.191510697835232 0.368142894536752 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2'] 109117 3656 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 19.016 2 -1.1916176822386493 0.368142894536752 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 80593 11177 PGQDRTLQL True PC9_epitope_Rep5 1026.5458077337798 1026.54470993586 47.981 2 -1.191641014966107 0.368142894536752 1.0 ['ENST00000561643.5_1_15:75646668-75647372:+|nuORF'] 35371 23317 GSAIQRLRCEL True PC9_epitope_Rep5 1244.6659399497998 1244.66428490379 94.668 3 -1.1916536627606489 0.368142894536752 1.0 ['nc|ENSG00000113851|Q96SW2-2|CRBN', 'ENSG00000113851|ENST00000231948|CRBN', 'ENST00000491834.5_1_3:3195556-3195715:-|nuORF', 'ENST00000459840.5_1_3:3192551-3196584:-|nuORF'] 60253 10590 LGRDFLLRNDP True H1975_Epitope_Rep3 1314.7044336334998 1314.7033299358602 45.804 2 -1.191657615128348 0.368142894536752 1.0 ['nc|ENSG00000158321|Q8WXX7-2|AUTS2', 'AUTS2|p.G1229Afs*16|1|0.19|ENSG00000158321|chr7:70790897-70790897|G/-|frameshift_variant', 'ENSG00000158321|ENST00000342771|AUTS2', 'nc|ENSG00000158321|Q8WXX7-5|AUTS2'] 83033 8429 PSKYRKRECIS True NCI_RA007_Epitope_Rep3 1365.7187037986498 1365.71760993586 40.243 2 -1.1916691274353903 0.3681507703046318 1.0 ['ENST00000569150.1_1_16:25251139-25264321:-|nuORF', 'ENSG00000155592|ENST00000328086|ZKSCAN2'] 136571 24842 WWGTQENLRR True H1975_Epitope_Rep2 1344.6687168311198 1344.6676099358601 102.12 2 -1.191798957268266 0.3681842541470893 1.0 ['ENST00000406644.7_1_22:41792013-41792211:+|nuORF'] 19377 24692 ELLRQSLPRWR True NCI_RA007_Epitope_Rep1 1452.83136548212 1452.83026993586 102.25 2 -1.1918772703066653 0.3681842541470893 1.0 ['ENST00000278070.6_1_10:103901398-103901503:+|nuORF'] 77441 21475 NSNVHELRVK True PC9_epitope_Rep1 1194.64691875738 1194.64582993586 87.445 2 -1.1918818656643997 0.3681842541470893 1.0 ['NPY5R|p.D346N|1|0.21|ENSG00000164129|chr4:163351309-163351309|G/A|missense_variant'] 135581 21295 WLAANNGD True PC9_epitope_Rep4 859.38243080679 859.38132993586 90.079 2 -1.1918958932051498 0.3681842541470893 1.0 ['ENSG00000081791|ENST00000432126|DELE1'] 117417 12347 TVPSTPAP True PC9_epitope_Rep3 768.40176926904 768.40066993586 52.521 2 -1.1919561569527204 0.3681842541470893 1.0 ['RASGRP4|p.P606T|1|0.46|ENSG00000171777|chr19:38411151-38411151|G/T|missense_variant'] 56142 13048 LAVKSYTG True PC9_epitope_Rep3 837.45961849833 837.45852993586 55.217 2 -1.1919641167766197 0.3681842541470893 1.0 ['ENST00000390340.2_1_7:38331389-38331587:-|nuORF'] 99828 5739 SILDPPDQ True NCI_RA007_Epitope_Rep5 883.4287122928699 883.42760993586 28.762 2 -1.1919761325305793 0.3681842541470893 1.0 ['ENST00000492329.5_1_3:49721463-49723185:-|nuORF', 'nc|ENSG00000173531|P26927|MST1', 'ENSG00000173531|ENST00000449682|MST1'] 62230 9385 LLEWSDRP True H1975_Epitope_Rep3 1014.5134449763399 1014.51234993586 41.1 2 -1.1920154613646523 0.3681842541470893 1.0 ['DOCK4|p.L1501*|1|0.32|ENSG00000128512|chr7:111747332-111747332|G/-|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 3233 12776 AGESCVWKLT True NCI_RA007_Epitope_Rep5 1092.5273807883198 1092.5262899358602 55.821 2 -1.1920277108022075 0.3681842541470893 1.0 ['ENST00000264694.12_1_4:186131276-186168470:+|nuORF'] 110346 6976 TETVDDVEK True H1975_Epitope_Rep3 1034.4767846840998 1034.4756899358601 31.795 2 -1.1921451209025709 0.3682045913407612 1.0 ['SLC22A3|p.I523_P526delinsT|1|0.07|ENSG00000146477|chr6:160447776-160447784|TTGCCTTGC/-|inframe_deletion'] 45165 19925 IPPMLIIF True NCI_RA007_Epitope_Rep2 942.5612471159 942.56014993586 82.503 2 -1.1921895340069708 0.3682078763708873 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 65430 11683 LRGHRRRHR True NCI_RA007_Epitope_Rep4 1242.7394712163 1242.73783490379 51.898 3 -1.1921934421637153 0.3682078763708873 1.0 ['ENST00000481474.5_1_6:28891330-28891657:-|nuORF'] 46020 5990 ISGHRASPNP True H1975_Epitope_Rep2 1034.52574099554 1034.52464993586 28.019 2 -1.192230111212199 0.3682157500529654 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130'] 20503 18882 EPLYGFHA True NCI_RA007_Epitope_Rep5 932.43921740692 932.43812993586 79.475 2 -1.1922878274522688 0.36821903468215295 1.0 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 69753 6939 LVFMAELFWWF True H1975_Epitope_Rep1 1487.7311659753098 1487.72953490379 31.733 3 -1.1923301715753147 0.36821903468215295 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 5751 17644 APASFPGER True PC9_epitope_Rep5 930.4559301002199 930.45482993586 72.879 2 -1.1923733977051016 0.36822690793081103 1.0 ['ENST00000358022.4_1_9:25677387-25677690:-|nuORF'] 124783 5944 VHDWLYYYAYK True PC9_epitope_Rep4 1519.7136013348702 1519.71196490379 29.793 3 -1.192482316077392 0.36823806497439154 1.0 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 34340 6773 GPDCATKL True NCI_RA007_Epitope_Rep2 803.38473930591 803.3841949679301 30.96 1 -1.1925161396576291 0.36823806497439154 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.G1527Wfs*20|1|0.85|ENSG00000105429|chr19:42356406-42356407|-/T|frameshift_variant'] 120757 14793 VEKRNSAV True PC9_epitope_Rep2 901.4981292653699 901.49702993586 62.165 2 -1.1925375517360226 0.36823806497439154 1.0 ['CLTC-VMP1|5|fusion'] 61565 14915 LKKALAAA True NCI_RA007_Epitope_Rep4 784.5170738047999 784.51596993586 64.833 2 -1.1925609552034355 0.36825839896321405 1.0 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'HIST1H1E|p.A60D|1|0.16|ENSG00000168298|chr6:26156569-26156569|C/A|missense_variant', 'ENSG00000168298|ENST00000304218|H1-4'] 75387 12770 NITKRWLKTH True NCI_RA007_Epitope_Rep2 1295.7462388758297 1295.7451499358601 54.289 2 -1.1927070826079795 0.36826365958507257 1.0 ['ENST00000600076.5_1_19:14628087-14674061:+|nuORF'] 33555 10003 GLELLTSGDPP True H1975_Epitope_Rep3 1097.56045473841 1097.5593499358602 43.512 2 -1.19273568904242 0.36826365958507257 1.0 ['nc|ENSG00000162924|Q04864|REL'] 5246 9676 ALPLTQGQ True NCI_RA007_Epitope_Rep2 826.45486747106 826.45376993586 42.257 2 -1.192739815473773 0.36826365958507257 1.0 ['nc|ENSG00000127415|P35475-2|IDUA', 'ENSG00000127415|ENST00000514224|IDUA', 'ENST00000514698.5_1_4:980866-997838:+|nuORF'] 31111 6528 GAVMKNWKR True PC9_epitope_Rep3 1088.59131845756 1088.5902299358602 30.137 2 -1.1927686311966796 0.36826365958507257 1.0 ['nc|ENSG00000107679|Q9HB21-2|PLEKHA1', 'ENSG00000107679|ENST00000368990|PLEKHA1', 'ENST00000481451.1_1_10:124172402-124177583:+|nuORF'] 42758 10200 IELTLNKP True PC9_epitope_Rep1 926.54368247546 926.54258993586 44.114 2 -1.1927693430203845 0.36826365958507257 1.0 ['ENSG00000164151|ENST00000296564|ICE1'] 22136 6944 ESRPGRHLC True H1975_Epitope_Rep3 1053.5137964128498 1053.5126899358602 31.671 2 -1.1927723555603937 0.36826365958507257 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant', 'LRP2|p.S830Rfs*3|1|0.26|ENSG00000081479|chr2:169259051-169259051|C/-|frameshift_variant', 'LRP2|p.S527Lfs*11|1|0.21|ENSG00000081479|chr2:169277939-169277940|-/A|frameshift_variant'] 46935 11642 ITNWMELCF True PC9_epitope_Rep3 1155.50928819603 1155.50764490379 49.796 3 -1.1927922946363567 0.36826365958507257 1.0 ['ENST00000216225.8_1_22:41368518-41368620:+|nuORF'] 61815 10643 LLASFKNEG True H1975_Epitope_Rep1 977.5181960036099 977.51708993586 45.895 2 -1.1928019469459945 0.36827153110047844 1.0 ['ENST00000573881.1_1_17:9444067-9460824:-|nuORF', 'ENSG00000170310|ENST00000306357|STX8'] 110030 23760 TEKLAQLIAT True NCI_RA007_Epitope_Rep3 1086.62847472858 1086.62736993586 102.99 2 -1.1928301180581 0.3682794024197266 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.S538Lfs*13|1|0.1|ENSG00000116539|chr1:155481257-155481257|G/-|frameshift_variant'] 28426 12396 FSCNFSKNDVM True H1975_Epitope_Rep3 1290.53729384902 1290.5361899358602 52.87 2 -1.1929736672393676 0.3682997333599143 1.0 ['ENSG00000146938|ENST00000381095|NLGN4X', 'nc|ENSG00000146938|Q8N0W4-2|NLGN4X', 'ENST00000477079.1_1_X:5762523-5821281:-|nuORF', 'nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y', 'nc|ENSG00000165246|Q8NFZ3|NLGN4Y', 'ENSG00000165246|ENST00000684976|NLGN4Y', 'NLGN4X|p.T609Nfs*43|1|0.54|ENSG00000146938|chrX:5893442-5893443|-/T|frameshift_variant', 'NLGN4Y|p.T609Nfs*43|1|0.42|ENSG00000165246|chrY:14840634-14840635|-/A|frameshift_variant'] 30435 8856 GAEVVRKNL True PC9_epitope_Rep4 984.5716285587998 984.57052993586 41.597 2 -1.1930576299911806 0.36830301520059805 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'ENST00000464012.1_1_6:31118734-31122515:-|nuORF'] 93705 19600 RQVLYLSP True H1975_Epitope_Rep2 974.5549158654999 974.55380993586 81.323 2 -1.193067149844174 0.36830301520059805 1.0 ['ENST00000466978.1_1_15:74640533-74658298:-|nuORF'] 98826 8816 SGPPLKAG True PC9_epitope_Rep5 725.40718900265 725.4066449679301 38.855 1 -1.1931325793505279 0.36830696399651175 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF'] 46577 8840 ITAMEEAALY True H1975_Epitope_Rep1 1110.52671208198 1110.52560993586 38.926 2 -1.1931669095867963 0.36830696399651175 1.0 ['ENSG00000173809|ENST00000639142|TDRD12', 'nc|ENSG00000173809|Q587J7|TDRD12'] 23384 13121 EVRYLEFSDRK True NCI_RA007_Epitope_Rep2 1440.7361276845998 1440.7350299358602 55.669 2 -1.1931989211651075 0.36830696399651175 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 87668 24337 QQSPAFFL True PC9_epitope_Rep3 936.4705175351999 936.46942993586 98.926 2 -1.1932011748429459 0.36830696399651175 1.0 ['ENST00000521988.5_2_8:93898270-93898507:-|nuORF'] 69170 11346 LTRYLENQTFR True H1975_Epitope_Rep1 1439.7521121019097 1439.75100993586 48.619 2 -1.193268459337674 0.36830696399651175 1.0 ['nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 57386 11088 LEAPGKREY True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 47.647 2 -1.1933042761004573 0.36830696399651175 1.0 ['DLGAP3|p.D194E|1|0.47|ENSG00000116544|chr1:34904802-34904802|G/T|missense_variant'] 91721 10655 RKDGPLDMRMD True PC9_epitope_Rep5 1332.62784018892 1332.62674993586 45.973 2 -1.1933221398866993 0.36830696399651175 1.0 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'METTL15|p.I248Sfs*45|1|0.19|ENSG00000169519|chr11:28296891-28296891|C/-|frameshift_variant', 'ENSG00000169519|ENST00000407364|METTL15'] 58023 19349 LEHQKFLKHKF True PC9_epitope_Rep5 1453.8194038160898 1453.81774490379 79.472 3 -1.1933338017408135 0.36830696399651175 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 491 6516 AANILKNN True PC9_epitope_Rep5 856.4766655448001 856.47556993586 30.036 2 -1.1933576205094882 0.36830696399651175 1.0 ['ENSG00000119684|ENST00000355774|MLH3', 'nc|ENSG00000119684|Q9UHC1-2|MLH3'] 112337 17482 TLADTRTPVT True PC9_epitope_Rep1 1073.57168812845 1073.5705899358602 72.04 2 -1.1933652239476595 0.36830696399651175 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'MUC17|p.N4447Kfs*5|1|0.28|ENSG00000169876|chr7:101053409-101053410|-/A|frameshift_variant', 'ENSG00000169876|ENST00000306151|MUC17'] 1366 8994 AEEAWAQMEE True H1975_Epitope_Rep2 1192.4706537578397 1192.4695499358602 39.547 2 -1.1935034601366696 0.3683522068991292 1.0 ['ENSG00000103319|ENST00000263026|EEF2K'] 14546 20563 DTRSRRGRFLN True H1975_Epitope_Rep2 1376.7385277264395 1376.73688490379 85.186 3 -1.1935708079524838 0.3683679443897699 1.0 ['ENSG00000083457|ENST00000263087|ITGAE'] 14532 9805 DTPLHAAL True PC9_epitope_Rep2 836.43921740692 836.43812993586 43.052 2 -1.1935824619646578 0.3683679443897699 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1', 'TRANK1|p.G1950Pfs*11|1|0.38|ENSG00000168016|chr3:36833597-36833603|CGGCCCC/-|frameshift_variant'] 75251 18190 NIEIFLLWFWW True PC9_epitope_Rep4 1565.80710779689 1565.8054649037902 78.034 3 -1.1936332934402298 0.3683764729329115 1.0 ['ENST00000502346.1_1_5:82350650-82350776:-|nuORF'] 91438 12789 RHLTQYHDHHK True H1975_Epitope_Rep1 1470.7228776623003 1470.7217899358602 54.256 2 -1.1936680636096395 0.3683764729329115 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 36262 8877 GVDVNSQNEVN True H1975_Epitope_Rep1 1173.52619448801 1173.52508993586 39.057 2 -1.1937059625436302 0.3683764729329115 1.0 ['ENSG00000154945|ENST00000285243|ANKRD40', 'ANKRD40|p.Q110Sfs*2|1|0.34|ENSG00000154945|chr17:50699849-50699849|G/-|frameshift_variant', 'ENST00000507114.1_1_17:48777854-48785015:-|nuORF'] 14505 16985 DTLDYLRPV True PC9_epitope_Rep6 1090.56587447202 1090.56476993586 77.882 2 -1.193777760621005 0.3683764729329115 1.0 ['ITGA10|p.S747L|1|0.08|ENSG00000143127|chr1:145898216-145898216|G/A|missense_variant'] 113781 23278 TMRPYIQEQ True NCI_RA007_Epitope_Rep5 1164.5597435457598 1164.55810490379 96.82 3 -1.1938107419414814 0.3683764729329115 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 46774 6922 ITFLMIAKP True H1975_Epitope_Rep1 1032.6041745570399 1032.60306993586 31.669 2 -1.193837500307639 0.3683764729329115 1.0 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 72593 13886 MLRYEEMTE True NCI_RA007_Epitope_Rep5 1200.51549577528 1200.51385490379 60.09 3 -1.193842974224542 0.3683764729329115 1.0 ['ENSG00000087448|ENST00000381271|KLHL42'] 64957 14548 LQEREKQL True PC9_epitope_Rep3 1042.5771078620598 1042.5760099358602 61.082 2 -1.1938512899811382 0.3683764729329115 1.0 ['PHF14|p.V560Ffs*61|1|0.26|ENSG00000106443|chr7:11036491-11036491|G/-|frameshift_variant', 'nc|ENSG00000106443|O94880-2|PHF14', 'ENST00000490957.5_1_7:11013950-11101713:+|nuORF', 'nc|ENSG00000106443|O94880-1|PHF14', 'ENSG00000106443|ENST00000634607|PHF14', 'ENST00000497851.1_1_7:11075344-11076425:+|nuORF'] 141111 7140 YSQTLSLH True NCI_RA007_Epitope_Rep5 947.4712458111899 947.47014993586 34.14 2 -1.1938861027424537 0.3683764729329115 1.0 ['ENSG00000159708|ENST00000329956|LRRC36', 'nc|ENSG00000159708|Q1X8D7-3|LRRC36', 'nc|ENSG00000159708|Q1X8D7-2|LRRC36'] 11263 5652 DEFYRWFQKMM True H1975_Epitope_Rep1 1579.69519147275 1579.6940899358601 26.808 2 -1.193906745248588 0.36838434039584966 1.0 ['ENSG00000176438|ENST00000682763|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-3|SYNE3', 'ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 82828 18895 PRSPRIRKRF True NCI_RA007_Epitope_Rep3 1311.8000057841898 1311.79837490379 82.613 3 -1.1939293855242652 0.3683876191069316 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 3297 5431 AGFSPGPM True PC9_epitope_Rep1 762.3370608375 762.33596993586 25.724 2 -1.1939371100719134 0.3683876191069316 1.0 ['ENST00000466409.1_1_9:95874378-95875386:+|nuORF'] 123838 10824 VGRPGKPG True NCI_RA007_Epitope_Rep5 766.4449714936999 766.4444249679301 48.267 1 -1.1940731651401109 0.36842039708043745 1.0 ['nc|ENSG00000084636|Q07092-2|COL16A1', 'ENSG00000084636|ENST00000373672|COL16A1'] 4602 16691 AKSKNTLKWHR True H1975_Epitope_Rep3 1367.77860163327 1367.77750993586 69.723 2 -1.1941806135590913 0.3684361299322439 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 56907 10654 LDQARSSREL True H1975_Epitope_Rep1 1173.61019889549 1173.60910993586 45.937 2 -1.1942037449120346 0.3684361299322439 1.0 ['ENSG00000072315|ENST00000262839|TRPC5'] 28678 13310 FSPERMRMRTR True H1975_Epitope_Rep1 1465.7394563265698 1465.73834993586 56.301 2 -1.1942555826379466 0.3684426842026603 1.0 ['ENST00000436518.5_1_22:20126736-20127081:+|nuORF'] 45671 19033 IRKFYYSP True PC9_epitope_Rep2 1072.57056592964 1072.56946993586 78.575 2 -1.1942767658715243 0.3684426842026603 1.0 ['ENST00000452400.6_1_8:71074989-71075782:-|nuORF'] 68805 10276 LTLPQNFGNIF True H1975_Epitope_Rep1 1262.66592286646 1262.66482993586 44.471 2 -1.1942956922760122 0.3684426842026603 1.0 ['nc|ENSG00000113597|A5PLN9-2|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-4|TRAPPC13', 'ENSG00000113597|ENST00000399438|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-5|TRAPPC13', 'ENST00000508304.5_1_5:64920917-64948411:+|nuORF', 'nc|ENSG00000113597|A5PLN9-7|TRAPPC13', 'ENST00000512009.5_1_5:64920875-64956772:+|nuORF'] 95749 13231 RYHRHRHIEWA True H1975_Epitope_Rep3 1559.79704566207 1559.79594993586 56.148 2 -1.1943270842324134 0.3684426842026603 1.0 ['TRIM49C|p.P128H|1|0.56|ENSG00000204449|chr11:90035594-90035594|C/A|missense_variant'] 112678 5216 TLFYQWNYRIN True PC9_epitope_Rep1 1516.7462984454796 1516.7446649037902 24.912 3 -1.1943601778161967 0.36845841532368545 1.0 ['ENST00000261263.4_1_12:72179453-72179861:+|nuORF'] 86465 20986 QKRKKEKP True H1975_Epitope_Rep2 1040.6454622053998 1040.6443699358601 86.871 2 -1.19436655124226 0.36845841532368545 1.0 ['ENSG00000152465|ENST00000378165|NMT2', 'ENST00000378150.1_1_10:15177331-15210611:-|nuORF'] 113074 8562 TLNQRVAL True PC9_epitope_Rep2 913.5345147740899 913.53340993586 38.294 2 -1.1945357562181147 0.3685036428171119 1.0 ['ENST00000492329.5_1_3:49721463-49723185:-|nuORF', 'nc|ENSG00000173531|P26927|MST1', 'ENSG00000173531|ENST00000449682|MST1', 'nc|ENSG00000186715|Q2TV78-2|MST1L', 'nc|ENSG00000186715|Q2TV78|MST1L'] 22046 26834 ESLLHLLIRR True PC9_epitope_Rep5 1248.76663996724 1248.76554993586 109.58 2 -1.1945459805356051 0.36850691806667746 1.0 ['NLRP10|p.F548Lfs*8|1|0.21|ENSG00000182261|chr11:7959968-7959968|A/-|frameshift_variant', 'ENSG00000182261|ENST00000691676|NLRP10'] 111729 19657 TIGSVRWKI True PC9_epitope_Rep1 1058.62366413166 1058.6225699358602 80.436 2 -1.1945508828574463 0.36850691806667746 1.0 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant', 'USP24|p.V1215*|1|0.31|ENSG00000162402|chr1:55125751-55125751|C/-|frameshift_variant', 'USP24|p.A1582Qfs*15|1|0.1|ENSG00000162402|chr1:55107257-55107257|C/-|frameshift_variant'] 132000 10343 VTSPHLPV True PC9_epitope_Rep5 848.47560291564 848.4745099358599 44.769 2 -1.194721092677684 0.3685272360457297 1.0 ['nc|ENSG00000188487|Q1MX18-6|INSC', 'nc|ENSG00000188487|Q1MX18-4|INSC', 'ENSG00000188487|ENST00000379556|INSC', 'nc|ENSG00000188487|Q1MX18|INSC', 'nc|ENSG00000188487|Q1MX18-3|INSC', 'ENST00000447214.6_1_11:15209769-15267583:+|nuORF', 'nc|ENSG00000188487|Q1MX18-5|INSC'] 94559 14690 RRRWRKPYSRW True NCI_RA007_Epitope_Rep2 1645.91782950109 1645.91672993586 61.811 2 -1.194784192731522 0.36853510006351264 1.0 ['ENST00000258821.7_1_14:20769994-20774086:-|nuORF'] 31704 11085 GEGEEARTWD True H1975_Epitope_Rep3 1148.47343063916 1148.4723299358602 47.731 2 -1.1948427416835643 0.36854164850628246 1.0 ['ENSG00000142102|ENST00000409548|PGGHG', 'nc|ENSG00000142102|Q32M88-2|PGGHG', 'ENST00000474221.5_1_11:289135-291269:+|nuORF'] 66522 5785 LSHNQIEELP True PC9_epitope_Rep1 1178.59315184902 1178.59150490379 27.068 3 -1.1948532629663515 0.36854164850628246 1.0 ['LGR6|p.E637Rfs*4|1|0.12|ENSG00000133067|chr1:202318210-202318210|G/-|frameshift_variant', 'nc|ENSG00000133067|Q9HBX8-1|LGR6', 'LGR6|p.P889Lfs*11|1|0.17|ENSG00000133067|chr1:202318963-202318963|G/-|frameshift_variant', 'nc|ENSG00000133067|Q9HBX8-2|LGR6', 'ENSG00000133067|ENST00000367278|LGR6'] 14190 8667 DSDWEPEEREL True H1975_Epitope_Rep1 1403.58410328695 1403.5830099358602 38.267 2 -1.1948542236344943 0.36854164850628246 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 126907 11880 VLQRPNLQKYV True H1975_Epitope_Rep1 1356.7877693346402 1356.7866699358601 50.696 2 -1.1948605205126377 0.36854164850628246 1.0 ['ENSG00000132953|ENST00000255305|XPO4'] 25309 9845 FDRDPEVFR True PC9_epitope_Rep2 1179.5672714543498 1179.56563490379 43.203 3 -1.1949048875945139 0.36855737500778285 1.0 ['nc|ENSG00000171385|Q9UK17-2|KCND3', 'ENSG00000171385|ENST00000302127|KCND3'] 71546 14324 MAMEHYPMTEQ True PC9_epitope_Rep1 1366.53557959686 1366.5344899358602 59.92 2 -1.1949193024964246 0.36855737500778285 1.0 ['nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF'] 46773 6426 ITFLDCLLH True NCI_RA007_Epitope_Rep1 1073.55795264061 1073.55684993586 29.019 2 -1.1949686932795334 0.36856064851133774 1.0 ['ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 12155 10329 DIEDYMREWRT True NCI_RA007_Epitope_Rep1 1512.6667277954398 1512.6656299358601 44.173 2 -1.1949817336197073 0.36856064851133774 1.0 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9'] 117917 22411 TWRWPWLRWWQ True NCI_RA007_Epitope_Rep1 1699.8524352798697 1699.8513299358601 91.828 2 -1.1950366356433721 0.3685685112317577 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 90218 20261 REDPNLVPS True PC9_epitope_Rep3 1025.5141732523298 1025.51357496793 83.194 1 -1.1950742301806476 0.36857505727662115 1.0 ['COX5B|p.T73S|1|0.11|ENSG00000135940|chr2:97647383-97647383|A/T|missense_variant', 'ENSG00000135940|ENST00000258424|COX5B'] 118789 14334 VAAEALLKKV True PC9_epitope_Rep1 1040.6593809340397 1040.65828993586 59.96 2 -1.1951718923222592 0.36857505727662115 1.0 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant'] 24278 10555 EYTGGFKI True PC9_epitope_Rep6 913.4545331178899 913.45342993586 51.4 2 -1.195173148756987 0.36857505727662115 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 25918 12422 FFQNQRYYLK True NCI_RA007_Epitope_Rep5 1405.7142700412098 1405.7131699358602 54.439 2 -1.1951816630544971 0.36857505727662115 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1'] 43457 6155 IGGSYKKL True H1975_Epitope_Rep3 864.5069030439199 864.50580993586 28.688 2 -1.195327317018976 0.3686202731811786 1.0 ['CON__ENSEMBL:ENSBTAP00000031900', 'ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF', 'ENST00000489736.5_1_3:148904295-148925363:-|nuORF'] 27687 18245 FPKAQEKSV True PC9_epitope_Rep4 1032.56039516876 1032.55928993586 78.248 2 -1.1953666503940716 0.3686268162406464 1.0 ['ENSG00000168939|ENST00000695325|SPRY3'] 111573 13520 TICVDFFFF True PC9_epitope_Rep1 1137.5205045027299 1137.51886490379 56.861 3 -1.1954341498085304 0.3686268162406464 1.0 ['ENST00000295951.7_1_3:57913451-57913754:+|nuORF'] 100101 4959 SISIFHYG True NCI_RA007_Epitope_Rep3 922.45486747106 922.45376993586 26.502 2 -1.1954480471697593 0.3686268162406464 1.0 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 27943 6191 FQEGM[Oxidation]LEKHE True H1975_Epitope_Rep3 1262.5601378490198 1262.55904993586 28.826 2 -1.1954791455073162 0.3686268162406464 1.0 ['nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L', 'nc|ENSG00000144893|Q86YW9-2|MED12L', 'nc|ENSG00000144893|Q86YW9-3|MED12L'] 46203 10286 ISMPQPLISVP True PC9_epitope_Rep1 1180.65258130144 1180.6514899358601 44.45 2 -1.1955306733952211 0.3686471276675216 1.0 ['chr1:221918712-221976287|258|18.01|0.18|6.65|-|0|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|5'] 124787 12662 VHEAVVSL True PC9_epitope_Rep5 852.4705175352 852.46942993586 53.709 2 -1.1955546818443394 0.3686549882344153 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 60168 7759 LGNTYTVSI True PC9_epitope_Rep3 966.5022115863001 966.50110993586 34.837 2 -1.1956269692031443 0.36868774900398404 1.0 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1', 'ENST00000459896.5_1_2:197703237-197707512:-|nuORF'] 78908 16380 PAGKWRSYKGE True NCI_RA007_Epitope_Rep2 1277.6516697846498 1277.6510749679298 68.44 1 -1.1957626102848704 0.3687454090462021 1.0 ['ENSG00000164976|ENST00000297625|MYORG'] 138656 21128 YIHQKKHSL True NCI_RA007_Epitope_Rep5 1152.64037682496 1152.63874490379 88.29 3 -1.1958764250158307 0.3687565360290822 1.0 ['ENST00000367765.5_1_1:170015969-170024554:-|nuORF'] 133272 17148 VVTPPLPA True PC9_epitope_Rep4 792.47454028648 792.47344993586 73.966 2 -1.1958766069746238 0.3687565360290822 1.0 ['ENST00000432329.6_1_2:208467595-208467667:+|nuORF'] 68005 9323 LTDGYQDLG True H1975_Epitope_Rep3 980.4450906329998 980.44398993586 40.858 2 -1.195885548205512 0.3687565360290822 1.0 ['nc|ENSG00000106278|P23471-3|PTPRZ1', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'PTPRZ1|p.E2050Kfs*21|1|0.36|ENSG00000106278|chr7:122051489-122051489|G/-|frameshift_variant', 'PTPRZ1|p.E687Dfs*38|1|0.07|ENSG00000106278|chr7:122011106-122011107|-/TGAAGTT|frameshift_variant', 'PTPRZ1|p.Q937Sfs*16|1|0.22|ENSG00000106278|chr7:122011854-122011855|-/T|frameshift_variant', 'PTPRZ1|p.N1509Sfs*36|1|0.09|ENSG00000106278|chr7:122013570-122013571|-/TC|frameshift_variant'] 75476 19982 NKIYVFFQHAF True PC9_epitope_Rep5 1412.72410644892 1412.72245490379 81.914 3 -1.195958203143894 0.36877684407096173 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 66679 4532 LSLAGAPH True NCI_RA007_Epitope_Rep4 764.41808803952 764.41698993586 23.828 2 -1.195997479685069 0.3687847023379728 1.0 ['ENST00000553607.1_1_16:30102588-30102927:-|nuORF'] 17697 21894 EHMKKMMKD True PC9_epitope_Rep6 1176.5453564349198 1176.54370490379 97.117 3 -1.1960251555970813 0.36880041828503135 1.0 ['ENSG00000167323|ENST00000526596|STIM1', 'nc|ENSG00000167323|Q13586-2|STIM1', 'nc|ENSG00000167323|Q13586|STIM1', 'STIM1|p.L248S|1|0.57|ENSG00000167323|chr11:4070155-4070155|T/C|missense_variant', 'ENST00000533445.1_1_11:4076769-4103426:+|nuORF'] 24971 6027 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 28.254 2 -1.1960446998612904 0.36880041828503135 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 3331 4333 AGGKHPGF True NCI_RA007_Epitope_Rep3 769.3871222644099 769.38602993586 23.793 2 -1.1960549605408484 0.3688082759650936 1.0 ['ENST00000242057.8_1_7:17338276-17338534:+|nuORF'] 95476 7687 RWLWWQPWWWK True NCI_RA007_Epitope_Rep1 1756.8779217517197 1756.87627490379 33.894 3 -1.1961659660042243 0.3688285820988423 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 31005 10464 GASLELSPER True H1975_Epitope_Rep1 1057.54038800017 1057.53928993586 45.204 2 -1.196272044303931 0.36886919284967384 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant', 'ENSG00000250799|ENST00000653904|PRODH2'] 124639 17262 VGWQLKNLVKK True PC9_epitope_Rep6 1311.8026911227896 1311.80104490379 78.997 3 -1.1962880246760812 0.36886919284967384 1.0 ['ENSG00000153721|ENST00000607772|CNKSR3', 'nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF'] 117598 9449 TVSVQPLN True PC9_epitope_Rep2 856.4654321547599 856.46432993586 41.684 2 -1.1963236363200578 0.36887704928236215 1.0 ['ESPN|p.K847Efs*7|1|0.25|ENSG00000187017|chr1:6460117-6460118|-/T|frameshift_variant', 'ENSG00000187017|ENST00000645284|ESPN'] 4234 12197 AIDMYLRKR True H1975_Epitope_Rep1 1164.6437479532399 1164.6426499358602 51.935 2 -1.1964780805051831 0.3688973535489332 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3'] 3748 10393 AGSPIQASVP True PC9_epitope_Rep6 925.48689587533 925.48578993586 50.709 2 -1.1965401238670537 0.36891632851203665 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 28053 7822 FQSFETWRRVD True H1975_Epitope_Rep1 1469.70516190949 1469.70352490379 35.038 3 -1.1965888122242754 0.36891632851203665 1.0 ['TRIM13|p.G155V|1|0.18|ENSG00000204977|chr13:50012404-50012404|G/T|missense_variant'] 66003 17589 LSEANRRLW True PC9_epitope_Rep2 1143.61489035311 1143.61378993586 72.935 2 -1.1966078209562414 0.36891632851203665 1.0 ['OPHN1|p.K700Rfs*7|1|0.44|ENSG00000079482|chrX:68063915-68063915|G/-|frameshift_variant', 'ENSG00000079482|ENST00000355520|OPHN1', 'ENST00000467444.1_1_X:67412641-67430091:-|nuORF'] 64907 17150 LQEDVKKAELH True PC9_epitope_Rep2 1308.70376492716 1308.70266993586 71.221 2 -1.1966217454665076 0.36891632851203665 1.0 ['ENSG00000152240|ENST00000282058|HAUS1', 'nc|ENSG00000152240|Q96CS2-2|HAUS1'] 116732 10860 TVDLNRVLN True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 47.091 2 -1.196628247676955 0.36892285479574816 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323', 'KRT31|p.A216S|1|0.37|ENSG00000094796|chr17:41395566-41395566|C/A|missense_variant'] 28831 14530 FSWRSILT True PC9_epitope_Rep2 1008.5392658013599 1008.5386749679301 61.162 1 -1.1966657017976403 0.36892285479574816 1.0 ['ZNF678|p.F414Sfs*10|1|0.07|ENSG00000181450|chr1:227655490-227655491|-/CTGCCACA|frameshift_variant', 'ENSG00000181450|ENST00000343776|ZNF678'] 1697 16595 AEGLRESRKHI True NCI_RA007_Epitope_Rep1 1294.7105816430999 1294.7094899358601 68.668 2 -1.196687875859444 0.36892285479574816 1.0 ['nc|ENSG00000103507|O14874-3|BCKDK', 'ENSG00000103507|ENST00000219794|BCKDK', 'ENST00000566568.1_1_16:31121058-31121856:+|nuORF', 'nc|ENSG00000103507|O14874-2|BCKDK'] 88084 19045 QRRQQKIQG True NCI_RA007_Epitope_Rep1 1140.6475874637197 1140.64594490379 78.222 3 -1.196716641013285 0.36892285479574816 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-4|USP16'] 98183 19668 SETCRCSILA True H1975_Epitope_Rep1 1081.4896153806098 1081.48907496793 81.868 1 -1.1967558869030959 0.36895560285276874 1.0 ['nc|ENSG00000182973|Q9H9A5-4|CNOT10', 'nc|ENSG00000182973|Q9H9A5-3|CNOT10'] 102001 5500 SLQPQVTW True PC9_epitope_Rep6 957.4919812557699 957.49088993586 29.133 2 -1.196816817592407 0.3689713112203622 1.0 ['nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 98776 21738 SGHVSLCWRP True NCI_RA007_Epitope_Rep3 1140.5498475683999 1140.54820490379 94.448 3 -1.1968236653680002 0.3689713112203622 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 89982 14282 RDIRMRELERQ True H1975_Epitope_Rep2 1500.7943283503998 1500.7932299358602 60.085 2 -1.1968778754865148 0.3689916112812088 1.0 ['ENSG00000093167|ENST00000336686|LRRFIP2', 'nc|ENSG00000093167|Q9Y608-2|LRRFIP2', 'nc|ENSG00000093167|Q9Y608-4|LRRFIP2', 'nc|ENSG00000093167|Q9Y608-5|LRRFIP2'] 15914 9144 EDLFGDLMLK True NCI_RA007_Epitope_Rep1 1179.58456131127 1179.5834699358602 39.57 2 -1.1969123196069147 0.36899946482133744 1.0 ['PLCB4|p.L432M|1|0.09|ENSG00000101333|chr20:9390586-9390586|C/A|missense_variant'] 79661 7759 PDRDPASPL True PC9_epitope_Rep3 966.4770594676199 966.47596993586 34.837 2 -1.1969334376332845 0.369007318165978 1.0 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000470994.1_1_7:23309673-23313234:+|nuORF'] 83737 5537 PVGTGGVQ True PC9_epitope_Rep3 713.37080349393 713.37025496793 26.379 1 -1.1969878112636294 0.3690479153702551 1.0 ['ENSG00000204539|ENST00000376288|CDSN'] 130301 12848 VSHLWFDNH True PC9_epitope_Rep3 1153.53049202281 1153.52884490379 54.439 3 -1.1970157552775207 0.3690479153702551 1.0 ['ENSG00000105675|ENST00000262623|ATP4A', 'ATP4A|p.A875Gfs*7|1|0.04|ENSG00000105675|chr19:35553164-35553165|-/AGCATCC|frameshift_variant'] 125222 12867 VIIQQAVPSP True PC9_epitope_Rep3 1050.6073453611798 1050.6062499358602 54.512 2 -1.197087490572385 0.36907606531262444 1.0 ['nc|ENSG00000115966|P15336-3|ATF2', 'nc|ENSG00000115966|P15336-7|ATF2', 'nc|ENSG00000115966|P15336-4|ATF2', 'nc|ENSG00000115966|P15336-5|ATF2', 'ENSG00000115966|ENST00000264110|ATF2'] 41653 22677 IAFKKKLY True PC9_epitope_Rep2 1009.6324379102098 1009.63134993586 92.721 2 -1.197096060366018 0.36907606531262444 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'ENST00000496418.5_1_3:132277817-132297733:-|nuORF'] 98780 18507 SGHVSLCWRP True NCI_RA007_Epitope_Rep5 1140.5498475683999 1140.54820490379 78.014 3 -1.1972097314949677 0.3690996204343227 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 81654 14286 PLLLQCLEWRW True PC9_epitope_Rep3 1455.76967674235 1455.76804490379 60.039 3 -1.1972155621515053 0.3690996204343227 1.0 ['ENST00000544803.5_1_2:176805763-176812258:-|nuORF'] 120812 10930 VELKPHDVR True PC9_epitope_Rep6 1091.60874234351 1091.60764993586 52.91 2 -1.1972364972217662 0.3690996204343227 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 83105 19624 PSPPKAFAV True PC9_epitope_Rep2 912.5069030439199 912.50580993586 80.868 2 -1.1972967394758576 0.369119916372144 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 49126 10713 KEKEVVSAL True NCI_RA007_Epitope_Rep4 1001.5757108797299 1001.5746099358599 48.054 2 -1.197445710573271 0.3691637630662021 1.0 ['nc|ENSG00000107263|Q13905-3|RAPGEF1', 'nc|ENSG00000107263|Q13905-2|RAPGEF1', 'nc|ENSG00000107263|Q13905|RAPGEF1', 'nc|ENSG00000107263|Q13905-4|RAPGEF1', 'ENSG00000107263|ENST00000683357|RAPGEF1'] 4456 16176 AIVDDLHAKVL True H1975_Epitope_Rep1 1192.6815729306 1192.6804699358602 67.566 2 -1.1974556877000055 0.3691637630662021 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 139751 21114 YPCCPCGF True NCI_RA007_Epitope_Rep2 888.2968529016399 888.29574993586 87.336 2 -1.1974778260762384 0.3691637630662021 1.0 ['HIVEP3|p.G223C|1|0.12|ENSG00000127124|chr1:41584131-41584131|C/A|missense_variant'] 11209 6819 DECLTSRP True NCI_RA007_Epitope_Rep1 919.40693130247 919.40582993586 30.531 2 -1.1975024470267202 0.3691637630662021 1.0 ['ENST00000500112.1_1_8:128231186-128231234:-|nuORF'] 72174 18213 MGFPAVCA True NCI_RA007_Epitope_Rep4 794.3455173462199 794.34440993586 78.808 2 -1.1976940340533617 0.3692338323316036 1.0 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66613305-66613563:+|nuORF'] 11537 21162 DFQCWDSKVK True PC9_epitope_Rep6 1254.5703082294597 1254.56920993586 94.247 2 -1.19773950640556 0.3692370867190125 1.0 ['ENST00000414912.2_1_6:26402606-26405688:+|nuORF'] 12929 11894 DLKPEQSVR True PC9_epitope_Rep4 1070.5720224816198 1070.57092993586 53.525 2 -1.1977426639506779 0.3692370867190125 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 72822 13025 MPLFHHQRI True PC9_epitope_Rep1 1177.61786755857 1177.61623490379 54.97 3 -1.1978018517723241 0.3692449355432781 1.0 ['ENST00000545737.5_1_12:28410092-28458713:+|nuORF', 'ENST00000539107.5_2_12:28343406-28458716:+|nuORF'] 15355 7484 EAGLAPGELQ True H1975_Epitope_Rep2 983.49237517859 983.49182496793 33.735 1 -1.197828033907929 0.36926848084412756 1.0 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF', 'ENST00000452600.1_1_2:130988892-130989183:+|nuORF'] 89012 23699 QVKENRLRREK True PC9_epitope_Rep4 1454.8429927949799 1454.84134490379 99.512 3 -1.1978596792986835 0.36926848084412756 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'nc|ENSG00000163617|Q8NCU4-2|CCDC191', 'ENST00000460813.5_1_3:113723412-113755878:-|nuORF'] 19626 6725 ELQSEIRIQVD True H1975_Epitope_Rep1 1328.69359416628 1328.69194490379 30.911 3 -1.1978604578341456 0.36926848084412756 1.0 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 58718 5674 LERSSGHC True PC9_epitope_Rep4 887.3919499446699 887.39084993586 28.632 2 -1.1978869565290453 0.36927632888711925 1.0 ['nc|ENSG00000104892|Q6P597-2|KLC3', 'ENSG00000104892|ENST00000391946|KLC3', 'nc|ENSG00000104892|Q6P597-3|KLC3'] 34458 17662 GPKKTKRE True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 74.72 2 -1.1979361299608509 0.3692841767348107 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 116973 14468 TVGLRPGKVM True PC9_epitope_Rep4 1056.6113851957998 1056.61028993586 63.562 2 -1.1979713770628238 0.3692906821942692 1.0 ['ENST00000580793.5_1_17:80006031-80006253:-|nuORF'] 113005 7710 TLMEDGSIRIE True H1975_Epitope_Rep1 1262.6176523447 1262.6165499358601 34.619 2 -1.1979743213419272 0.3692906821942692 1.0 ['nc|ENSG00000080854|Q9UPX0|IGSF9B', 'ENSG00000080854|ENST00000533871|IGSF9B'] 62425 6266 LLHGFGGG True NCI_RA007_Epitope_Rep2 756.39187329168 756.39076993586 28.978 2 -1.197975570260264 0.3692906821942692 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 56516 10147 LDFPVRDEKEP True NCI_RA007_Epitope_Rep1 1343.67213044571 1343.6710299358601 43.481 2 -1.1979940997498115 0.3692906821942692 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 136311 23652 WSRLFVLI True PC9_epitope_Rep1 1032.6120368187999 1032.6109299358602 95.766 2 -1.1980440987680268 0.3692985293751711 1.0 ['ENST00000568631.5_2_16:2317267-2317702:-|nuORF'] 62453 20200 LLHSKAVTV True PC9_epitope_Rep1 966.58621599378 966.58510993586 82.529 2 -1.1982660893415744 0.36940590979782273 1.0 ['ENST00000560597.1_1_15:65748048-65748153:-|nuORF', 'ENST00000395652.7_1_15:65746746-65748153:-|nuORF'] 101729 10048 SLNIDSIFSK True PC9_epitope_Rep2 1122.5920892198599 1122.59098993586 43.975 2 -1.1982884248868508 0.3694216007066698 1.0 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF'] 75908 7741 NLQTVNVDKN True H1975_Epitope_Rep3 1143.58840082175 1143.58730993586 34.758 2 -1.198309404088596 0.3694216007066698 1.0 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF'] 67172 9193 LSQYPMMRGP True PC9_epitope_Rep5 1178.55763537078 1178.55652993586 40.305 2 -1.1983422631733975 0.3694402985074627 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2'] 28241 17893 FRKKKREQ True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 78.42 2 -1.198362480961778 0.3694402985074627 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 136104 16160 WRLPFDLWTPP True PC9_epitope_Rep3 1426.7397565130595 1426.7386499358602 67.305 2 -1.1983783379478405 0.3694402985074627 1.0 ['ENST00000427522.6_1_20:62190209-62190602:-|nuORF'] 16400 7419 EEKDIHEELPK True NCI_RA007_Epitope_Rep2 1365.6776097489699 1365.6765099358602 33.484 2 -1.1983895109364409 0.3694402985074627 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3'] 28732 24376 FSSFTDHP True H1975_Epitope_Rep1 936.39774651776 936.39664993586 101.08 2 -1.1985092712179684 0.3694402985074627 1.0 ['ENST00000357700.10_1_10:5681946-5682531:-|nuORF'] 82717 18426 PQYRSSKFR True PC9_epitope_Rep5 1167.61489035311 1167.61324490379 75.896 3 -1.1985338067609075 0.3694402985074627 1.0 ['ENSG00000106789|ENST00000375077|CORO2A', 'ENSG00000103647|ENST00000261861|CORO2B', 'nc|ENSG00000103647|Q9UQ03-2|CORO2B'] 89225 4544 QVVCARCSDYR True NCI_RA007_Epitope_Rep3 1298.5859753769398 1298.58486993586 24.742 2 -1.1985448229930333 0.3694402985074627 1.0 ['ENST00000493635.1_1_6:36993330-36995936:+|nuORF'] 83062 9628 PSLNPDGFE True H1975_Epitope_Rep2 974.4345259493 974.43342993586 42.012 2 -1.1985451286693676 0.3694402985074627 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000109472|P16870-2|CPE', 'ENSG00000109472|ENST00000402744|CPE'] 110023 7839 TEKFDLSN True H1975_Epitope_Rep3 952.4501760134399 952.44906993586 35.129 2 -1.1985982355801292 0.3694402985074627 1.0 ['ENSG00000120440|ENST00000239587|TTLL2'] 130521 7091 VSQLQAFL True PC9_epitope_Rep5 904.5018176634799 904.50072993586 32.241 2 -1.1986217075890353 0.3694402985074627 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB', 'SPTB|p.D1069N|1|0.35|ENSG00000070182|chr14:64786760-64786760|C/T|missense_variant'] 82830 19669 PRSPRIRKRF True NCI_RA007_Epitope_Rep5 1311.8000057841898 1311.79837490379 82.569 3 -1.1986641450154925 0.3694402985074627 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 35561 10375 GSVTLSEIRLP True PC9_epitope_Rep3 1170.66083748602 1170.65920490379 44.85 3 -1.198719799544063 0.3694402985074627 1.0 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 3662 15670 AGPVRNLQP True PC9_epitope_Rep1 950.52976374682 950.52866993586 65.096 2 -1.198720201856804 0.3694402985074627 1.0 ['ENST00000360642.7_1_4:170541712-170541889:+|nuORF', 'ENST00000512813.5_1_4:170541712-170557134:+|nuORF'] 34247 16384 GNQRGHKQMEK True NCI_RA007_Epitope_Rep2 1311.6466014875498 1311.6455099358602 68.455 2 -1.198799568482615 0.3694402985074627 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1'] 38743 8562 HGLGHVFG True NCI_RA007_Epitope_Rep1 822.41367136542 822.41256993586 37.306 2 -1.1988133311393383 0.3694402985074627 1.0 ['ENSG00000213199|ENST00000349064|ASIC3', 'nc|ENSG00000213199|Q9UHC3-2|ASIC3', 'nc|ENSG00000213199|Q9UHC3-3|ASIC3', 'ASIC3|p.S37R|1|0.16|ENSG00000213199|chr7:151048996-151048996|C/A|missense_variant', 'nc|ENSG00000213199|Q9UHC3-4|ASIC3'] 36737 9085 GVKGAKIK True PC9_epitope_Rep3 799.5279728416699 799.52686993586 39.885 2 -1.198816199946321 0.3694402985074627 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 22538 4075 ETHIRVPA True PC9_epitope_Rep4 921.50321464581 921.50210993586 21.954 2 -1.198819638652997 0.3694402985074627 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 80321 18979 PGGGFGGG True NCI_RA007_Epitope_Rep3 604.26052476896 604.25997496793 82.938 1 -1.1988225088584497 0.3694402985074627 1.0 ['CON__Q6IFZ6'] 22105 20069 ESQAAKDLLYR True PC9_epitope_Rep1 1292.67246479888 1292.6713699358602 82.021 2 -1.1988309352740947 0.3694402985074627 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 96959 19264 SAWLTALLLP True PC9_epitope_Rep4 1083.63283183303 1083.6317299358602 82.202 2 -1.198869850830061 0.3694402985074627 1.0 ['ENSG00000171561|ENST00000641541|OR2AT4'] 74666 23488 NGNGHEHC True PC9_epitope_Rep4 866.3089485967 866.30784993586 98.649 2 -1.199006706431382 0.3694402985074627 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 102790 1936 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 10.545 2 -1.199025831682718 0.3694402985074627 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 62557 2695 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 13.864 2 -1.1990417237112345 0.3694402985074627 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 70718 8376 LWRIRWEELQF True NCI_RA007_Epitope_Rep2 1574.8357821562197 1574.83414490379 37.221 3 -1.199138198706727 0.36946842118355266 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 56076 7660 LATKMEYFYWR True H1975_Epitope_Rep1 1506.7329568804598 1506.73184993586 34.439 2 -1.1991607064327932 0.36946842118355266 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 6245 7527 APQPLNLVS True PC9_epitope_Rep5 937.52328138405 937.52218993586 33.902 2 -1.1992152717266706 0.369488700670373 1.0 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 83932 11909 PVQQGLFI True PC9_epitope_Rep2 900.5069030439199 900.50580993586 51.131 2 -1.1993248352570507 0.36956197298709054 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1'] 131685 16049 VTNDSMHREI True PC9_epitope_Rep5 1200.55572079448 1200.55408490379 66.72 3 -1.1993293098866669 0.36956197298709054 1.0 ['nc|ENSG00000182938|Q7RTS5|OTOP3', 'ENSG00000182938|ENST00000328801|OTOP3'] 15366 7299 EAGRLRHRP True H1975_Epitope_Rep2 1090.6108080321799 1090.60970993586 33.013 2 -1.1993489316317696 0.36956197298709054 1.0 ['ENST00000548577.1_17:6915938-6917031:+|nuORF', 'nc|ENSG00000219200|Q6P5S7-2|RNASEK'] 91260 15350 RGGQGHGE True PC9_epitope_Rep3 796.3576130412799 796.35650993586 64.199 2 -1.1993531260435797 0.3695698135734451 1.0 ['ENSG00000115297|ENST00000233638|TLX2'] 60021 9191 LGKKAAGI True PC9_epitope_Rep6 756.4857736765199 756.48466993586 45.484 2 -1.1994189180139665 0.3695979305799102 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 45297 12084 IPWYQSMFNWN True H1975_Epitope_Rep1 1484.6547065597597 1484.65360993586 51.494 2 -1.1994258714127588 0.3695979305799102 1.0 ['nc|ENSG807|P61550|ERVS71-1'] 102789 1875 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 10.207 2 -1.199474776662865 0.3696182066907101 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 62556 2627 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 13.529 2 -1.199486683972623 0.3696214495348953 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 130744 14945 VSWPFLLYMLV True PC9_epitope_Rep5 1366.73591700258 1366.73428490379 62.488 3 -1.1994954774851985 0.3696214495348953 1.0 ['nc|ENSG00000001461|Q6P499-3|NIPAL3', 'nc|ENSG00000001461|Q6P499-2|NIPAL3', 'ENSG00000001461|ENST00000374399|NIPAL3'] 28238 19279 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.147 2 -1.199567260792121 0.36965416039695076 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 128239 9252 VPNRVLAP True PC9_epitope_Rep6 864.5181364339599 864.51702993586 45.739 2 -1.1995984798126291 0.3696574022259529 1.0 ['SPANXN3|p.K59Rfs*5|1|0.66|ENSG00000189252|chrX:143509067-143509067|C/-|frameshift_variant', 'ENSG00000189252|ENST00000370503|SPANXN3'] 33343 22592 GKRPAAAAAA True PC9_epitope_Rep4 882.5035489989798 882.50244993586 95.132 2 -1.1996111496331379 0.3696574022259529 1.0 ['ENSG00000124535|ENST00000380773|WRNIP1', 'nc|ENSG00000124535|Q96S55-2|WRNIP1'] 39470 19094 HLDEAIHVL True PC9_epitope_Rep3 1045.5556441414901 1045.5545499358602 78.668 2 -1.1996355352308155 0.36966064389370407 1.0 ['nc|ENSG00000071564|P15923-3|TCF3', 'nc|ENSG00000071564|P15923-2|TCF3', 'ENSG00000071564|ENST00000262965|TCF3'] 73742 8474 NADETWWIFHL True PC9_epitope_Rep3 1430.6619001151798 1430.66080993586 37.557 2 -1.1996613145663162 0.36966064389370407 1.0 ['nc|ENSG00000158488|P15812-10|CD1E', 'nc|ENSG00000158488|P15812-3|CD1E'] 101086 3979 SLGHPRPQEK True NCI_RA007_Epitope_Rep4 1147.60980497267 1147.6087099358601 21.55 2 -1.1997134107558607 0.36968091720759033 1.0 ['nc|ENSG00000128881|Q6IQ55-3|TTBK2', 'nc|ENSG00000128881|Q6IQ55-2|TTBK2', 'ENSG00000128881|ENST00000267890|TTBK2'] 67775 9928 LSYRQTSL True PC9_epitope_Rep5 966.5134449763399 966.51234993586 43.16 2 -1.1998308529049426 0.36970902760507335 1.0 ['ENST00000495864.5_1_3:45877070-45877133:-|nuORF'] 101883 14583 SLPPPQSQK True PC9_epitope_Rep5 980.52909504048 980.52798993586 61.095 2 -1.1998329534283756 0.36970902760507335 1.0 ['ENST00000596279.1_1_19:17337742-17339154:+|nuORF', 'ENST00000594283.5_1_19:17337742-17339731:+|nuORF', 'ENSG00000099330|ENST00000215061|OCEL1'] 61358 20143 LISRRSRHRA True NCI_RA007_Epitope_Rep1 1250.74321918406 1250.74212993586 82.561 2 -1.1998612503685633 0.36974173412417155 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F'] 59833 6464 LGFFFQSV True PC9_epitope_Rep2 943.4803539429098 943.47924993586 30.277 2 -1.1998845327809733 0.3697620054214021 1.0 ['ENST00000398637.9_1_12:46576929-46576956:-|nuORF'] 62555 2559 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 13.192 2 -1.1999343007131835 0.36976848282893593 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 7753 13236 ASQPADSATY True H1975_Epitope_Rep3 1009.43525422529 1009.43414993586 56.167 2 -1.1999796019114544 0.36976848282893593 1.0 ['nc|ENSG00000211780|A0A075B6T7|TRAV6'] 125515 25464 VKAVAWCP True NCI_RA007_Epitope_Rep4 872.4578446765199 872.45674993586 111.07 2 -1.2000023121938839 0.36976848282893593 1.0 ['ENST00000488829.1_1_9:89626569-89628063:+|nuORF', 'ENSG00000117399|ENST00000310955|CDC20'] 84800 17880 QDYQTWLD True PC9_epitope_Rep3 1067.45598966987 1067.4554749679298 73.975 1 -1.2000327850619592 0.36976848282893593 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'ENSG00000184304|ENST00000331968|PRKD1'] 120517 4497 VEFIQNSV True PC9_epitope_Rep2 934.47599683846 934.47488993586 22.655 2 -1.200053120137516 0.36977172129109265 1.0 ['MSH4|p.S633Lfs*12|1|0.49|ENSG00000057468|chr1:75881362-75881362|C/-|frameshift_variant', 'ENSG00000057468|ENST00000263187|MSH4'] 44737 5351 ILWRVLRPECL True NCI_RA007_Epitope_Rep2 1396.8013112238 1396.79965490379 25.433 3 -1.2000602568832524 0.36977172129109265 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000533635.5_1_11:6587803-6591461:+|nuORF', 'ENST00000525883.5_1_11:6587352-6591461:+|nuORF', 'ENST00000529821.5_1_11:6587803-6593213:+|nuORF', 'ENST00000530197.5_1_11:6587352-6593213:+|nuORF'] 120753 7546 VEKRLNFTLRH True H1975_Epitope_Rep3 1411.80481638111 1411.80316490379 34.007 3 -1.2001508635542113 0.36979710577353425 1.0 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000565866.5_1_16:8735295-8739997:+|nuORF'] 108690 7727 SYQTEEDRK True NCI_RA007_Epitope_Rep1 1154.5203808315798 1154.5192899358601 34.049 2 -1.2001583687081638 0.36979710577353425 1.0 ['MYH1|p.T1855S|1|0.6|ENSG00000109061|chr17:10494576-10494576|G/C|missense_variant'] 19035 16651 ELFFTKQY True PC9_epitope_Rep6 1074.53859709502 1074.53750993586 76.517 2 -1.200253607655369 0.36979710577353425 1.0 ['ENST00000310015.10_1_2:174771195-174771288:-|nuORF'] 5649 3237 APAAPPSALG True PC9_epitope_Rep4 850.45486747106 850.45376993586 18.38 2 -1.2002877020454286 0.36979710577353425 1.0 ['ENSG00000088038|ENST00000221232|CNOT3'] 53431 19997 KRCRKCAP True PC9_epitope_Rep6 960.5109599618797 960.50986993586 89.585 2 -1.200292056593229 0.36979710577353425 1.0 ['ENSG00000099139|ENST00000674117|PCSK5', 'nc|ENSG00000099139|Q92824|PCSK5', 'nc|ENSG00000099139|Q92824-2|PCSK5', 'PCSK5|p.Q1534Afs*34|1|0.2|ENSG00000099139|chr9:76332540-76332541|-/G|frameshift_variant'] 70357 5361 LVSRPIRWYPN True PC9_epitope_Rep5 1399.7724536236697 1399.7707949037901 25.636 3 -1.2002945327421612 0.36979710577353425 1.0 ['ENSG00000196569|ENST00000421865|LAMA2'] 27756 20555 FPSRTYRD True PC9_epitope_Rep5 1040.5039429218 1040.50284993586 84.109 2 -1.2002983553619588 0.36979710577353425 1.0 ['ENST00000378103.7_3_9:35748839-35749166:-|nuORF'] 63988 8809 LNVSYSGLVN True H1975_Epitope_Rep3 1064.55022440788 1064.54912993586 38.891 2 -1.2003500524812871 0.36979710577353425 1.0 ['ENSG00000255151|ENST00000527482|GLYATL1B'] 140639 4940 YRRYRFTGFY True PC9_epitope_Rep3 1427.7098533671096 1427.70820490379 24.095 3 -1.2004334316312988 0.3698049405124507 1.0 ['ENSG00000186965|ENST00000334055|KRTAP19-2'] 33008 18918 GIGLSVLVIM True PC9_epitope_Rep4 1000.5990891765999 1000.59798993586 80.855 2 -1.20045136572545 0.3698114145771435 1.0 ['SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant'] 37242 14720 GVRILEFE True PC9_epitope_Rep4 961.5232813840499 961.52218993586 64.555 2 -1.2004728528302924 0.3698114145771435 1.0 ['ENSG00000128581|ENST00000315322|IFT22'] 565 7912 AAQQPHIAGV True PC9_epitope_Rep5 990.5246783663799 990.52358993586 35.375 2 -1.20047910458964 0.3698114145771435 1.0 ['nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 5414 4989 ALTEEMKLASQ True NCI_RA007_Epitope_Rep1 1219.61183868827 1219.61020490379 23.489 3 -1.2005005761948953 0.3698114145771435 1.0 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21'] 545 21464 AAPVLGVP True PC9_epitope_Rep3 722.4326754745 722.43212496793 87.853 1 -1.2005297140968079 0.3698146513680494 1.0 ['ENST00000536835.2_1_15:29967228-29967648:+|nuORF'] 72562 20278 MLNMLIVF True PC9_epitope_Rep4 979.5234817081899 979.52238993586 86.142 2 -1.2005575438246097 0.3698146513680494 1.0 ['ENSG00000162341|ENST00000294309|TPCN2', 'ENST00000442692.2_1_11:68822646-68853210:+|nuORF'] 15961 10518 EDPTLRDSDL True H1975_Epitope_Rep3 1159.5356965425499 1159.5345899358601 45.522 2 -1.2006040877203403 0.3698224852071006 1.0 ['nc|ENSG00000127241|P48740|MASP1'] 76190 19009 NNIREIEGNVF True PC9_epitope_Rep3 1303.6520637074698 1303.65096993586 78.339 2 -1.2008074787920435 0.3699003057951918 1.0 ['nc|ENSG00000112697|Q9NV96-2|TMEM30A'] 18996 8775 ELERALHQAK True H1975_Epitope_Rep3 1193.6516697846498 1193.6500349037901 38.76 3 -1.2008171243106205 0.3699003057951918 1.0 ['CON__Q6NXH9'] 37661 16053 GVWYKYQPL True PC9_epitope_Rep2 1152.59678067748 1152.59512490379 67.004 3 -1.200933636799109 0.369914606406384 1.0 ['nc|ENSG00000151572|Q32M45-2|ANO4', 'ENSG00000151572|ENST00000392977|ANO4'] 25330 10030 FDTSDDEE True NCI_RA007_Epitope_Rep2 956.3247007168 956.32360993586 43.618 2 -1.2009417862752787 0.369914606406384 1.0 ['ENSG00000171055|ENST00000405912|FEZ2', 'nc|ENSG00000171055|Q9UHY8-2|FEZ2'] 108960 19879 TAEIIKTLP True PC9_epitope_Rep4 984.5855472874399 984.58444993586 84.597 2 -1.200983863107998 0.369914606406384 1.0 ['ENSG00000134056|ENST00000256441|MRPS36'] 112369 15282 TLAPGPRLAL True PC9_epitope_Rep5 1007.6127650947899 1007.61166993586 63.791 2 -1.2009982228736602 0.369914606406384 1.0 ['ENST00000485230.5_2_3:112930474-112968600:+|nuORF', 'ENST00000495514.5_2_3:112930393-112968640:+|nuORF'] 68504 12405 LTFWKNWHFRL True H1975_Epitope_Rep1 1546.81973816926 1546.81864993586 52.749 2 -1.2010182607740405 0.369914606406384 1.0 ['nc|ENSG00000165688|Q10713-2|PMPCA'] 92582 13824 RMQDYLLMNRQ True NCI_RA007_Epitope_Rep1 1466.7122385192197 1466.71114993586 57.789 2 -1.2010598403500594 0.36991511204464383 1.0 ['ENST00000257836.3_1_11:32874897-32874975:+|nuORF'] 80800 5808 PHLPDNTP True PC9_epitope_Rep3 889.4293809992101 889.42828993586 27.41 2 -1.2010937596426998 0.36991511204464383 1.0 ['ENST00000266560.7_1_12:7281390-7281504:-|nuORF'] 122868 6228 VGHGSPVP True PC9_epitope_Rep2 748.3867879112399 748.38568993586 29.354 2 -1.2011095268087797 0.36991511204464383 1.0 ['ENST00000540929.5_1_12:2926443-2927078:+|nuORF'] 15701 8844 EAVSELIYKSD True H1975_Epitope_Rep3 1252.61869789052 1252.6176099358602 39.024 2 -1.2011120219844724 0.36991511204464383 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 79 6250 AAAKGRLN True PC9_epitope_Rep1 799.46643521427 799.46532993586 28.854 2 -1.2011569541170675 0.36991511204464383 1.0 ['ENSG00000100227|ENST00000252115|POLDIP3', 'nc|ENSG00000100227|Q9BY77-2|POLDIP3'] 65374 3495 LRDWMYKHRFK True NCI_RA007_Epitope_Rep1 1578.8241719266996 1578.82252490379 17.508 3 -1.2011853499455618 0.36991511204464383 1.0 ['TGIF2LX|p.A212Pfs*9|1|0.59|ENSG00000153779|chrX:89922719-89922719|G/-|frameshift_variant', 'ENSG00000153779|ENST00000283891|TGIF2LX', 'TGIF2LX|p.W100Cfs*87|1|0.11|ENSG00000153779|chrX:89922384-89922384|G/-|frameshift_variant', 'ENSG00000176679|ENST00000321217|TGIF2LY'] 18808 18257 ELDISKNGV True PC9_epitope_Rep1 973.50802524273 973.50692993586 75.015 2 -1.2012051239921295 0.36991511204464383 1.0 ['LRRC7|p.R1423Gfs*9|1|0.35|ENSG00000033122|chr1:70076225-70076225|C/-|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7', 'ENST00000415775.2_1_1:70225872-70503822:+|nuORF', 'LRRC7|p.N600Kfs*11|1|0.65|ENSG00000033122|chr1:70028286-70028287|-/AA|frameshift_variant', 'LRRC7|p.S947Vfs*6|1|0.26|ENSG00000033122|chr1:70038770-70038771|-/A|frameshift_variant', 'LRRC7|p.P1016Hfs*8|1|0.17|ENSG00000033122|chr1:70038980-70038980|G/-|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-3|LRRC7', 'LRRC7|p.P431Lfs*27|1|0.07|ENSG00000033122|chr1:70018803-70018803|C/-|frameshift_variant'] 41696 10654 IAHMKNYIARF True PC9_epitope_Rep4 1362.7230609031 1362.7219699358602 48.73 2 -1.2012206772866432 0.36991511204464383 1.0 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 123136 10166 VGKQELSI True NCI_RA007_Epitope_Rep4 872.4967322830398 872.49562993586 45.962 2 -1.2012397877847782 0.3699183455338611 1.0 ['ENSG00000141434|ENST00000269202|MEP1B'] 97289 12486 SEAGGQHPRDP True H1975_Epitope_Rep2 1149.51629851065 1149.5152099358602 53.118 2 -1.2012401778683242 0.3699183455338611 1.0 ['ENST00000381781.2_1_19:4891229-4891436:-|nuORF'] 35304 22165 GRKTRRFK True PC9_epitope_Rep4 1047.6413798844699 1047.6402899358602 93.482 2 -1.2013518838136656 0.3699248120300752 1.0 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000515592.1_1_5:140041093-140041799:+|nuORF'] 45168 23589 IPPMLIIF True PC9_epitope_Rep1 942.5612471159 942.56014993586 95.523 2 -1.2013994421275649 0.3699248120300752 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 131730 8435 VTPGHEEEEPV True NCI_RA007_Epitope_Rep1 1221.55134660669 1221.5502499358602 36.809 2 -1.201420072141152 0.3699248120300752 1.0 ['ENSG00000178685|ENST00000313028|PARP10', 'ENST00000526007.5_1_8:145051654-145057989:-|nuORF'] 36113 8788 GVAHLFDLDP True H1975_Epitope_Rep1 1082.53965972418 1082.53856993586 38.731 2 -1.2014526855329026 0.3699248120300752 1.0 ['ENSG00000079435|ENST00000244289|LIPE', 'nc|ENSG00000079435|Q05469-2|LIPE'] 100765 8132 SLEDLHSLDSR True H1975_Epitope_Rep1 1270.6153438455801 1270.61424993586 36.218 2 -1.201484723828023 0.369928045037096 1.0 ['ENSG00000083799|ENST00000427738|CYLD', 'nc|ENSG00000083799|Q9NQC7-2|CYLD'] 18475 11545 EKEALKQEVM-[Oxidation] True H1975_Epitope_Rep3 1219.6118390687097 1219.6107499358602 49.536 2 -1.2014905030319478 0.369928045037096 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 13136 12212 DLRDDRDRRGP True NCI_RA007_Epitope_Rep2 1369.68107241997 1369.67996993586 52.101 2 -1.2016494999078062 0.369946937406022 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 74126 10233 NEARKKFWQ True NCI_RA007_Epitope_Rep4 1205.63054041725 1205.62888490379 46.218 3 -1.201670642120483 0.369946937406022 1.0 ['ENSG00000142178|ENST00000270162|SIK1'] 75674 19864 NLGQRDLPV True PC9_epitope_Rep5 1010.5508931142198 1010.54978993586 81.457 2 -1.2016810798602775 0.369946937406022 1.0 ['ENSG00000140678|ENST00000268296|ITGAX'] 127917 13900 VPGTLLPR True H1975_Epitope_Rep3 851.52288746123 851.5217899358599 58.778 2 -1.201681622011529 0.369946937406022 1.0 ['ENSG00000186063|ENST00000340020|AIDA'] 2953 5639 AFEEDLHKMLM True H1975_Epitope_Rep3 1362.63119423386 1362.63008993586 26.728 2 -1.2017059281552365 0.36995476687543494 1.0 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4', 'MAP3K4|p.G1039Pfs*16|1|0.05|ENSG00000085511|chr6:161091519-161091520|-/CCACTTGGTAAAGGAATTACCAAATATA|frameshift_variant'] 122120 15072 VGAFAGAA True NCI_RA007_Epitope_Rep5 662.33877508966 662.33822496793 64.643 1 -1.2017435517660338 0.3699658278968624 1.0 ['ENST00000420551.1_1_2:242441106-242447985:-|nuORF', 'ENST00000316586.8_1_2:242447465-242448045:-|nuORF'] 7708 13855 ASNFQWLL True PC9_epitope_Rep4 977.4970666362099 977.49596993586 61.194 2 -1.2017496397763157 0.3699658278968624 1.0 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF', 'ENST00000512723.1_1_5:38528826-38530749:-|nuORF'] 46749 16323 ITENREMLP True PC9_epitope_Rep3 1101.54884450889 1101.54774993586 67.922 2 -1.201824046094669 0.3699658278968624 1.0 ['ENSG00000164303|ENST00000296741|ENPP6'] 36733 5513 GVKGAKIK True NCI_RA007_Epitope_Rep5 799.5279728416699 799.52686993586 27.894 2 -1.2018330443841063 0.3699860828072966 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 58397 9406 LENQNSLL True H1975_Epitope_Rep3 929.4818104948899 929.48070993586 41.18 2 -1.2018924604173187 0.3699939113038508 1.0 ['ENSG00000112394|ENST00000368851|SLC16A10'] 75519 6323 NKSQYSLTR True NCI_RA007_Epitope_Rep5 1095.56727145435 1095.5661699358602 30.999 2 -1.201964260963373 0.3700265911180695 1.0 ['ENSG00000160714|ENST00000292211|UBE2Q1', 'nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1'] 112034 9750 TISKGHKI True PC9_epitope_Rep3 882.52870111766 882.52760993586 42.457 2 -1.2019751781751236 0.3700330508685172 1.0 ['STOX1|p.Y782Lfs*9|1|0.29|ENSG00000165730|chr10:68886139-68886140|-/T|frameshift_variant', 'STOX1|p.L805Cfs*20|1|0.18|ENSG00000165730|chr10:68886206-68886206|G/-|frameshift_variant', 'ENSG00000165730|ENST00000298596|STOX1'] 11118 11939 DDDGGSPL True PC9_epitope_Rep2 774.30317742658 774.30208993586 51.246 2 -1.2019800017774516 0.3700330508685172 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 60249 8476 LGRALEKTIAF True NCI_RA007_Epitope_Rep3 1217.7132074120498 1217.71156490379 40.417 3 -1.2020114223799827 0.3700330508685172 1.0 ['ENST00000586600.5_1_19:13842681-13842998:+|nuORF', 'ENST00000588071.5_1_19:13842681-13843075:+|nuORF'] 93711 13458 RQVVLPQL True PC9_epitope_Rep6 951.5865503469497 951.5860049679301 63.459 1 -1.2020420900256255 0.3700330508685172 1.0 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000523654.5_1_5:71615928-71616063:-|nuORF', 'ENST00000520285.5_1_5:71590560-71616015:-|nuORF', 'ENST00000522404.5_1_5:71537397-71616033:-|nuORF'] 109543 4721 TDRRFCRVYFA True NCI_RA007_Epitope_Rep1 1432.70338808768 1432.70173490379 22.445 3 -1.2021208914945969 0.3700362805029571 1.0 ['ENST00000395837.1_1_17:16284702-16284777:+|nuORF'] 130250 18109 VSFYYAPF True NCI_RA007_Epitope_Rep5 992.4643695255997 992.46326993586 76.459 2 -1.2021315323067199 0.3700362805029571 1.0 ['OR2L2|p.T245I|1|0.22|ENSG00000203663|chr1:248039001-248039001|C/T|missense_variant', 'ENSG00000203663|ENST00000641771|OR2L2'] 43554 22955 IGRKWQRWRR True PC9_epitope_Rep3 1440.8327028947997 1440.8316099358601 93.561 2 -1.2022360650951325 0.3700565322730944 1.0 ['ENST00000357156.6_1_20:33104228-33114094:+|nuORF'] 16830 4347 EEYHYLNQDCF True NCI_RA007_Epitope_Rep2 1459.5714304282699 1459.5703299358602 21.546 2 -1.2023927183303762 0.37010163258206397 1.0 ['nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF'] 100795 23946 SLEGMCGT True PC9_epitope_Rep3 796.3095257603201 796.30842993586 97.394 2 -1.2024543038720585 0.3701094586703443 1.0 ['ENSG00000164080|ENST00000684192|RAD54L2', 'ENST00000487093.5_1_3:51624427-51671126:+|nuORF'] 43173 7731 IFFPSFFLP True H1975_Epitope_Rep1 1113.5899043918898 1113.5888099358601 34.698 2 -1.2025123702309062 0.3701126862055685 1.0 ['ENST00000602725.5_1_1:32373878-32374037:-|nuORF'] 122011 17564 VFVLPFPV True NCI_RA007_Epitope_Rep3 916.5422259234799 916.54112993586 77.051 2 -1.2025124330121744 0.3701126862055685 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 119096 16821 VAGRELLTAV True PC9_epitope_Rep5 1027.6025943339098 1027.6014899358602 69.712 2 -1.2025846491842167 0.3701485861949014 1.0 ['ENSG00000162391|ENST00000302250|FAM151A'] 98837 23371 SGRPGPRL True PC9_epitope_Rep4 838.47733425114 838.47622993586 98.153 2 -1.2026019318972634 0.3701485861949014 1.0 ['ENST00000441869.5_1_11:46402650-46402776:+|nuORF'] 78823 8060 PADIRLPE True NCI_RA007_Epitope_Rep4 909.4919812557699 909.49088993586 37.781 2 -1.202616519976209 0.3701485861949014 1.0 ['ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'ENST00000428400.5_1_X:47082893-47085639:+|nuORF', 'ENSG00000102225|ENST00000357227|CDK16', 'nc|ENSG00000102225|Q00536-3|CDK16', 'nc|ENSG00000102225|Q00536-2|CDK16'] 23074 7849 EVIFPEDVSP True NCI_RA007_Epitope_Rep2 1130.54955570154 1130.5484499358602 35.159 2 -1.202623457333934 0.3701564111164946 1.0 ['ENST00000475947.6_1_17:16343543-16344720:+|nuORF'] 8942 11899 AVFSPWAPV True PC9_epitope_Rep6 972.5069030439199 972.50580993586 57.003 2 -1.2026575240218866 0.37015826480160996 1.0 ['nc|ENSG00000203618|P13224-2|GP1BB'] 98823 6495 SGPPLKAG True NCI_RA007_Epitope_Rep4 725.40718900265 725.4066449679301 31.584 1 -1.2026687070386495 0.37015826480160996 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF'] 93848 6350 RRDRENKRSKN True NCI_RA007_Epitope_Rep1 1457.7923542044498 1457.7907049037901 28.726 3 -1.2026946967467345 0.37015826480160996 1.0 ['ENST00000605822.5_1_12:51777293-51785401:-|nuORF'] 126604 19367 VLMAQKEGKR True PC9_epitope_Rep3 1158.65431263694 1158.65320993586 79.719 2 -1.2026965346573306 0.37015826480160996 1.0 ['ENSG00000170949|ENST00000683776|ZNF160'] 117854 13191 TVYKAYHVP True PC9_epitope_Rep2 1076.5654805492 1076.5643899358602 56.017 2 -1.202718899403939 0.37015826480160996 1.0 ['ENST00000560591.5_1_15:67835673-67951132:+|nuORF', 'nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 6101 7679 APLYKRLA True H1975_Epitope_Rep1 930.5650866263799 930.56398993586 34.503 2 -1.202745601063735 0.37017391304347824 1.0 ['TET3|p.K1103Rfs*79|1|0.42|ENSG00000187605|chr2:74099315-74099315|A/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3'] 112762 21172 TLHMPTYLVA True PC9_epitope_Rep1 1144.59506642532 1144.59396993586 86.271 2 -1.202762843367797 0.37017391304347824 1.0 ['LVRN|p.P301L|1|0.16|ENSG00000172901|chr5:115984633-115984633|C/T|missense_variant'] 46009 8192 ISGDRGVL True PC9_epitope_Rep5 815.4501164437899 815.44900993586 36.452 2 -1.2028054021630534 0.3701817368728339 1.0 ['nc|ENSG00000077800|O75344-3|FKBP6', 'nc|ENSG00000077800|O75344-2|FKBP6', 'ENSG00000077800|ENST00000252037|FKBP6'] 140998 8292 YSHRWKRN True PC9_epitope_Rep4 1145.5842589311699 1145.58262490379 39.355 3 -1.2028133383536557 0.3701895605078135 1.0 ['nc|ENSG00000120594|Q6UX71-2|PLXDC2', 'ENSG00000120594|ENST00000377252|PLXDC2', 'PLXDC2|p.H59Q|1|0.12|ENSG00000120594|chr10:20001839-20001839|C/A|missense_variant'] 126946 9418 VLRHLNLK True PC9_epitope_Rep2 991.62908386527 991.62798993586 41.566 2 -1.2028670238554904 0.3702006086578473 1.0 ['ENSG00000134061|ENST00000256447|CD180'] 58519 7698 LEQFLMDIEIP True H1975_Epitope_Rep3 1346.6791899720997 1346.67808993586 34.591 2 -1.2028701594378217 0.3702006086578473 1.0 ['ENST00000326857.9_1_3:98541165-98544168:-|nuORF'] 37839 13542 GYLGTRCEC True H1975_Epitope_Rep2 1000.4106367839199 1000.40952993586 57.226 2 -1.2028843844096273 0.3702006086578473 1.0 ['ENSG00000082781|ENST00000296181|ITGB5'] 82673 6247 PQPSSRAS True H1975_Epitope_Rep3 828.4089799078 828.40788993586 29.042 2 -1.2029123714656975 0.3702084316696892 1.0 ['ENST00000488863.5_2_3:43020947-43095053:+|nuORF', 'ENST00000273146.6_1_3:43020947-43074030:+|nuORF'] 116999 5816 TVHASSTPA True PC9_epitope_Rep1 869.42429561877 869.42318993586 27.187 2 -1.2029609412469093 0.3702410970474617 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 119548 11723 VASRGWRQAA True PC9_epitope_Rep5 1100.5839245779998 1100.5828299358602 50.091 2 -1.2030622136609486 0.37026916245388714 1.0 ['ENST00000506402.5_1_4:515617-515826:+|nuORF'] 102787 1380 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 7.5009 2 -1.203069125807172 0.37026916245388714 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 72823 12968 MPLFHHQRI True PC9_epitope_Rep5 1177.61786755857 1177.61623490379 54.891 3 -1.2031849318364085 0.3703142466774314 1.0 ['ENST00000545737.5_1_12:28410092-28458713:+|nuORF', 'ENST00000539107.5_2_12:28343406-28458716:+|nuORF'] 23073 7927 EVIFPEDVSP True NCI_RA007_Epitope_Rep1 1130.54955570154 1130.5484499358602 34.827 2 -1.2032133039006678 0.37032206779197874 1.0 ['ENST00000475947.6_1_17:16343543-16344720:+|nuORF'] 93867 8179 RRELWFWWRGW True H1975_Epitope_Rep3 1676.8476842525997 1676.84602490379 36.44 3 -1.203237053951509 0.37032391077549803 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 135631 23915 WLLFSWHH True H1975_Epitope_Rep3 1124.5555845718402 1124.5544899358601 99.703 2 -1.2033161891690434 0.37032391077549803 1.0 ['ENST00000330574.2_1_11:62416811-62416880:-|nuORF'] 114069 6878 TPEVIWRNGVL True PC9_epitope_Rep3 1282.70337100434 1282.70173490379 31.472 3 -1.2033250239983768 0.37032391077549803 1.0 ['ENST00000511805.5_1_4:3344715-3380011:+|nuORF'] 99751 24956 SIILFKVKFL True PC9_epitope_Rep2 1206.77401676346 1206.77236490379 101.66 3 -1.203334854425833 0.37032391077549803 1.0 ['ENST00000333881.3_2_1:152573149-152573311:+|nuORF'] 12364 17234 DIRYDLFL True PC9_epitope_Rep1 1053.54949613189 1053.54838993586 71.108 2 -1.2033706100779928 0.37032391077549803 1.0 ['ENSG00000170044|ENST00000466937|ZPLD1', 'nc|ENSG00000170044|Q8TCW7-2|ZPLD1'] 122844 5933 VGGVQGKR True PC9_epitope_Rep3 799.46643521427 799.46532993586 27.881 2 -1.2034030388308936 0.3703565706620962 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 127934 16946 VPGWKLCP True NCI_RA007_Epitope_Rep2 898.4734947406598 898.47238993586 70.654 2 -1.2035339419524964 0.3704140689038476 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 79951 11576 PESRSQEPL True PC9_epitope_Rep5 1041.50908787189 1041.50798993586 49.521 2 -1.2035503975830613 0.3704218880015897 1.0 ['ENSG00000179922|ENST00000325351|ZNF784'] 110576 17741 TFRPLVDSV True PC9_epitope_Rep2 1032.56039516876 1032.55928993586 73.523 2 -1.2036061423259616 0.3704269428507563 1.0 ['ENSG00000101350|ENST00000375712|KIF3B'] 88459 8340 QSRQDVLEKYY True H1975_Epitope_Rep1 1427.70449320315 1427.70338993586 37.011 2 -1.2036784412626178 0.3704269428507563 1.0 ['ENSG00000172817|ENST00000310193|CYP7B1'] 354 7683 AAKASRDVI True PC9_epitope_Rep4 929.5294293936498 929.52832993586 36.932 2 -1.2036852350901541 0.3704269428507563 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant'] 36734 8954 GVKGAKIK True PC9_epitope_Rep1 799.5279728416699 799.52686993586 39.284 2 -1.2037556632251616 0.3704269428507563 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 121283 18113 VETLTIRR True NCI_RA007_Epitope_Rep1 986.58727862294 986.58673496793 74.597 1 -1.203773201412039 0.3704269428507563 1.0 ['ENSG00000137462|ENST00000642700|TLR2'] 37627 22265 GVWCAEDD True PC9_epitope_Rep1 893.3225329721698 893.32142993586 90.459 2 -1.203775307016121 0.3704269428507563 1.0 ['AEBP1|p.A432V|1|0.07|ENSG00000106624|chr7:44110241-44110241|C/T|missense_variant'] 9643 7808 AYDPYLIAMS True PC9_epitope_Rep2 1142.53179746242 1142.5307099358602 35.403 2 -1.2038156614718987 0.3704269428507563 1.0 ['ENSG00000262919|ENST00000576892|CCNQ', 'nc|ENSG00000262919|Q8N1B3-2|CCNQ'] 101528 13872 SLLFLEWEIKH True H1975_Epitope_Rep1 1413.76563690773 1413.76452993586 58.507 2 -1.203928986339322 0.37043476101183453 1.0 ['chr7:17482733-17483406|443|19.48|0.84|4.53|-|0|LINC02889,LINC02889|1'] 7127 10555 AQVWRRVSEH True NCI_RA007_Epitope_Rep2 1266.65815214742 1266.6570499358602 45.654 2 -1.203999776177877 0.37045499701967016 1.0 ['nc|ENSG00000164808|Q14159-2|SPIDR', 'ENST00000297423.8_1_8:48192559-48196630:+|nuORF'] 123068 14840 VGKEPHPQDTL True PC9_epitope_Rep6 1219.6197009500297 1219.6186099358601 69.055 2 -1.2040624940704578 0.370512486185101 1.0 ['ENST00000514990.1_1_3:129288623-129290035:-|nuORF'] 122026 19228 VFVQRLSL True PC9_epitope_Rep5 960.5756513100798 960.57454993586 79.0 2 -1.2041281402421222 0.3705405371844383 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.S2897N|1|0.3|ENSG00000053747|chr18:23932273-23932273|G/A|missense_variant'] 13670 23294 DPRFRQYTY True PC9_epitope_Rep4 1244.5938205553598 1244.59272993586 97.854 2 -1.2041297583105135 0.3705405371844383 1.0 ['ENSG00000004139|ENST00000585482|SARM1', 'nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENST00000379061.8_1_17:26708312-26722930:+|nuORF'] 124016 14003 VGSGFPLP True PC9_epitope_Rep1 772.41194002992 772.41084993586 58.7 2 -1.204285438049804 0.3705437522506302 1.0 ['MSANTD4|p.E277Vfs*13|1|0.06|ENSG00000170903|chr11:106009731-106009743|CCAAGTTCATTTT/-|frameshift_variant', 'ENSG00000170903|ENST00000301919|MSANTD4'] 130522 19130 VSQPQVSPL True PC9_epitope_Rep1 953.5181960036099 953.51708993586 78.376 2 -1.2042993105856503 0.3705437522506302 1.0 ['nc|ENSG00000196632|Q9BYP7-3|WNK3', 'nc|ENSG00000196632|Q9BYP7-4|WNK3', 'nc|ENSG00000196632|Q9BYP7-2|WNK3', 'ENSG00000196632|ENST00000354646|WNK3'] 128852 9758 VQDLKHQI True PC9_epitope_Rep1 979.54507945779 979.5439899358599 42.393 2 -1.2044044267076495 0.37055156828171953 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 114555 19189 TQCFQLSNM True PC9_epitope_Rep2 1070.4525015959 1070.45140993586 79.183 2 -1.204536593047115 0.37059524696416596 1.0 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39', 'ENST00000496183.5_1_20:34292405-34295154:-|nuORF', 'ENST00000397254.2_1_X:43889279-43890164:+|nuORF', 'ENST00000482563.1_1_20:34293047-34295154:-|nuORF'] 90276 18985 REEKRWRWINN True NCI_RA007_Epitope_Rep2 1585.8225917035695 1585.8214899358602 78.699 2 -1.2045487755283615 0.37059524696416596 1.0 ['CLEC5A|p.F148Lfs*19|1|0.17|ENSG00000258227|chr7:141931728-141931728|G/-|frameshift_variant', 'nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 98403 6250 SFDWSMDAVP True NCI_RA007_Epitope_Rep4 1153.47501086229 1153.47337490379 30.646 3 -1.2045747114626386 0.37059524696416596 1.0 ['ENST00000551915.5_1_12:83081308-83379891:+|nuORF', 'ENSG00000179104|ENST00000321196|TMTC2'] 114735 20466 TQIRELWDRL True H1975_Epitope_Rep1 1328.72008369764 1328.71898993586 85.121 2 -1.2046405919348369 0.37059524696416596 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 117915 21797 TWRWPWLRWWQ True H1975_Epitope_Rep3 1699.8524352798697 1699.8513299358601 91.132 2 -1.2048120801223197 0.37067755993990487 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 129960 21255 VRVKGGGH True PC9_epitope_Rep3 808.4667695674398 808.46566993586 87.052 2 -1.2048444317172577 0.37069639819723627 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 76310 12133 NPRGCKSI True PC9_epitope_Rep5 873.44907089797 873.44796993586 51.659 2 -1.2048980841207082 0.37069639819723627 1.0 ['nc|ENSG00000185480|Q9NWS1-6|PARPBP'] 56515 9665 LDFPVRDEKEP True H1975_Epitope_Rep3 1343.67213044571 1343.6710299358601 42.195 2 -1.204899260594484 0.37069639819723627 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 80603 4423 PGQPALTRVPP True H1975_Epitope_Rep3 1131.64004247179 1131.6389499358602 22.136 2 -1.204905986425861 0.37069639819723627 1.0 ['ENSG00000162928|ENST00000295030|PEX13'] 110270 6819 TERTFAVP True NCI_RA007_Epitope_Rep1 919.4763311916298 919.4752299358599 30.531 2 -1.20495824081874 0.3707042113627334 1.0 ['ENST00000425688.1_1_2:166651406-166657756:+|nuORF'] 130719 15993 VSVNTWTP True PC9_epitope_Rep3 902.44978209062 902.44868993586 66.661 2 -1.2050427154016903 0.370706029870017 1.0 ['ENST00000244051.2_1_20:49576777-49576906:+|nuORF'] 54335 17690 KYEDLYAFSYN True H1975_Epitope_Rep2 1411.6295969273897 1411.6284899358602 73.365 2 -1.2050495097827074 0.370706029870017 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 97147 8572 SDQLVDVLLEE True H1975_Epitope_Rep1 1258.62926257422 1258.6281699358601 37.899 2 -1.2050557766458232 0.370706029870017 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1', 'ENST00000466164.5_1_16:67859786-67861893:+|nuORF', 'ENST00000568990.5_1_16:67859786-67861893:+|nuORF', 'ENST00000569504.5_1_16:67859786-67861483:+|nuORF'] 18267 8886 EIQTARPVHT True PC9_epitope_Rep2 1150.6094706194997 1150.60836993586 39.532 2 -1.2050794258248907 0.370706029870017 1.0 ['ENSG00000165646|ENST00000644641|SLC18A2', 'nc|ENSG00000165646|Q05940-2|SLC18A2'] 89132 9393 QVQVYELQPSN True PC9_epitope_Rep2 1303.6408303174296 1303.63972993586 41.466 2 -1.2050877896856718 0.370706029870017 1.0 ['ENSG00000151929|ENST00000369085|BAG3'] 55234 6373 LADEKSEK True NCI_RA007_Epitope_Rep1 918.46582607758 918.46472993586 28.815 2 -1.20513440456593 0.3707450902500186 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 128797 21329 VPYVTPHP True PC9_epitope_Rep2 908.4756029156399 908.4745099358599 87.506 2 -1.2052148077594524 0.3707450902500186 1.0 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-3|SVEP1'] 22572 19495 ETKRKNVFR True NCI_RA007_Epitope_Rep5 1176.6727395823998 1176.6716499358602 81.874 2 -1.2052916804369465 0.3707450902500186 1.0 ['ENSG00000107863|ENST00000396432|ARHGAP21', 'ARHGAP21|p.G1380Rfs*9|1|0.13|ENSG00000107863|chr10:24591238-24591239|-/G|frameshift_variant', 'ENST00000401578.2_1_6:80776237-80776996:-|nuORF', 'nc|ENSG00000107863|Q5T5U3-3|ARHGAP21'] 119073 16513 VAGLISPWN True PC9_epitope_Rep5 955.51271670035 955.51160993586 68.518 2 -1.2052925668736372 0.3707450902500186 1.0 ['nc|ENSG00000118514|Q9H2A2-2|ALDH8A1', 'ENSG00000118514|ENST00000265605|ALDH8A1'] 135192 5883 WERPLWERDSF True PC9_epitope_Rep2 1519.72081197363 1519.71916490379 28.023 3 -1.2053045762899222 0.3707450902500186 1.0 ['ENST00000489671.5_2_3:141666651-141666756:-|nuORF'] 129961 19430 VRVKGGGH True PC9_epitope_Rep6 808.4667695674398 808.46566993586 87.398 2 -1.2053298845878488 0.37075290174414993 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 821 24770 ACHCSTCY True NCI_RA007_Epitope_Rep1 886.2771800862199 886.27663496793 102.55 1 -1.2053794576737014 0.37077312676895574 1.0 ['ENSG00000135346|ENST00000627148|CGA'] 31343 19397 GDNCDCYG True NCI_RA007_Epitope_Rep4 845.2320037156101 845.2314549679301 83.878 1 -1.20549316015687 0.37081817843266257 1.0 ['PCSK1|p.D320Y|1|0.37|ENSG00000175426|chr5:96410911-96410911|C/A|missense_variant'] 61428 6711 LIVPGGVK True H1975_Epitope_Rep3 781.50617476793 781.50506993586 30.769 2 -1.2055738427078002 0.37082459254477973 1.0 ['ENSG00000113657|ENST00000343218|DPYSL3', 'nc|ENSG00000113657|Q14195|DPYSL3', 'ENST00000519672.1_1_5:146788331-146833150:-|nuORF', 'nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2', 'CRMP1|p.G68Efs*16|1|0.1|ENSG00000072832|chr4:5861138-5861138|G/-|frameshift_variant', 'ENST00000511535.1_1_4:5823489-5889136:-|nuORF', 'nc|ENSG00000072832|Q14194|CRMP1', 'CRMP1|p.N462Kfs*26|1|0.1|ENSG00000072832|chr4:5828564-5828565|-/T|frameshift_variant', 'ENSG00000072832|ENST00000324989|CRMP1'] 116133 5144 TSSRTQLP True PC9_epitope_Rep6 888.4664947839199 888.46538993586 27.509 2 -1.2056247125974349 0.37082459254477973 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4'] 68585 7401 LTHDASNI True PC9_epitope_Rep1 869.4242956187701 869.42318993586 33.281 2 -1.20563512606651 0.37082459254477973 1.0 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 120978 19149 VEPKRQKLRA True NCI_RA007_Epitope_Rep5 1223.7462388758297 1223.74567496793 80.528 1 -1.2056637329574393 0.37082459254477973 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 63153 18586 LLRNRNFWVLR True NCI_RA007_Epitope_Rep4 1485.86808534401 1485.8669899358601 80.399 2 -1.2057054656355242 0.37082640319737853 1.0 ['nc|ENSG00000170265|Q9UDV7-2|ZNF282', 'ENSG00000170265|ENST00000610704|ZNF282'] 100679 11388 SLDLRPLEV True H1975_Epitope_Rep2 1040.5866099165999 1040.58550993586 48.853 2 -1.2057280171188403 0.37082640319737853 1.0 ['nc|ENSG00000087085|P22303-3|ACHE', 'nc|ENSG00000087085|P22303-4|ACHE', 'ENSG00000087085|ENST00000241069|ACHE', 'nc|ENSG00000087085|P22303-2|ACHE'] 135051 14439 WDVVEWSD True NCI_RA007_Epitope_Rep5 1034.4345259492998 1034.4334299358602 62.22 2 -1.2057541325698222 0.37082640319737853 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 1092 9805 AEALNVFQQAA True H1975_Epitope_Rep3 1160.58258716532 1160.5814899358602 42.741 2 -1.2057725946659985 0.37082640319737853 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000592222.5_1_19:1115804-1132196:-|nuORF'] 131156 6082 VTEILFISGSP True H1975_Epitope_Rep3 1161.6281403754099 1161.6270499358602 28.407 2 -1.205781636603405 0.37082640319737853 1.0 ['nc|ENSG00000131620|Q5XXA6-3|ANO1'] 138283 7348 YHCNQCGKAF True NCI_RA007_Epitope_Rep2 1169.4746340228096 1169.4735299358601 33.205 2 -1.205856411058146 0.3708296097706285 1.0 ['nc|ENSG00000291239|Q3ZCX4-2|ZNF568', 'ENSG00000198453|ENST00000333987|ZNF568'] 97068 14746 SDEFRRNCTQR True H1975_Epitope_Rep1 1410.6422443831 1410.64114993586 61.941 2 -1.2058886862541902 0.3708296097706285 1.0 ['ENSG00000233757|ENST00000425953|ZNF892'] 10570 6010 CMMELLGMP True H1975_Epitope_Rep3 1023.4261528190299 1023.4250499358601 28.13 2 -1.205974347379904 0.37083741885836985 1.0 ['nc|ENSG00000143479|O43781-2|DYRK3', 'ENSG00000143479|ENST00000367109|DYRK3'] 15558 7662 EAQAQVSPP True H1975_Epitope_Rep2 925.4505103666098 925.4499649679301 34.427 1 -1.206118426827654 0.37086544786585746 1.0 ['nc|ENSG00000140577|Q6UUV7-3|CRTC3', 'ENSG00000140577|ENST00000268184|CRTC3'] 14548 11711 DTSLLKALN True PC9_epitope_Rep5 973.54441075145 973.54330993586 50.045 2 -1.2061223914594656 0.37086544786585746 1.0 ['ENSG00000179813|ENST00000313851|FAM216B'] 44314 13428 ILDFYFQV True PC9_epitope_Rep5 1043.53278343859 1043.5316899358602 56.666 2 -1.2061354135714442 0.37086865327094687 1.0 ['ENST00000495444.1_1_2:191785873-191789325:+|nuORF'] 101189 10029 SLGYGHTVPL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 49.145 2 -1.206151273793285 0.37086865327094687 1.0 ['ENST00000472190.5_1_1:233765551-233807273:+|nuORF'] 20655 10161 EQAGPPVD True H1975_Epitope_Rep1 811.37119741675 811.37064496793 44.023 1 -1.2062086809336787 0.37087185851690974 1.0 ['ENSG00000205835|ENST00000442080|GMNC'] 102786 941 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 5.132 2 -1.2062155925630011 0.37087185851690974 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 41620 9469 IADSPGHVF True H1975_Epitope_Rep3 941.46068112749 941.45958993586 41.426 2 -1.206233411221309 0.3708750636037579 1.0 ['ENSG00000274209|ENST00000620264|ANTXRL'] 93813 19139 RRARFWRRHRE True H1975_Epitope_Rep1 1624.9035764192797 1624.9024699358602 79.766 2 -1.2062448198995581 0.3708750636037579 1.0 ['FOXD4L5|p.V313F|1|0.23|ENSG00000204779|chr9:65283441-65283441|C/A|missense_variant'] 28236 19012 FRKKKREQ True H1975_Epitope_Rep3 1118.6672602791398 1118.6661699358601 79.724 2 -1.2063624607231518 0.3708832799741891 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 126432 5796 VLKNARIAPAA True PC9_epitope_Rep6 1122.6873270173799 1122.68569490379 30.49 3 -1.2063829938337851 0.3708832799741891 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-2|MLXIP', 'ENST00000541750.1_12:122618368-122620257:+|nuORF', 'nc|ENSG00000175727|Q9HAP2-4|MLXIP'] 83503 4798 PTSLVLNGIR True NCI_RA007_Epitope_Rep4 1068.6291434349198 1068.6280499358602 24.892 2 -1.206407551609098 0.3708832799741891 1.0 ['ENSG00000170044|ENST00000466937|ZPLD1', 'nc|ENSG00000170044|Q8TCW7-2|ZPLD1'] 125369 11198 VIRGGATR True NCI_RA007_Epitope_Rep5 828.49298431528 828.49188993586 49.707 2 -1.206415827777482 0.3708832799741891 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 10588 3780 CNETRWSQKW True PC9_epitope_Rep1 1336.5982543127998 1336.5971499358602 19.455 2 -1.2064523618452188 0.3708832799741891 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1'] 3870 6045 AGYPVYKYVPY True NCI_RA007_Epitope_Rep2 1318.65977485686 1318.6581149037902 28.119 3 -1.2064554373639371 0.3708832799741891 1.0 ['ENST00000313755.9_1_22:18900690-18907344:-|nuORF', 'nc|ENSG00000100033|O43272-2|PRODH', 'nc|ENSG00000100033|O43272-1|PRODH', 'ENSG00000100033|ENST00000357068|PRODH'] 119382 16022 VAPPGLIT True NCI_RA007_Epitope_Rep2 766.4588902223401 766.45778993586 67.04 2 -1.2064653966310839 0.3708832799741891 1.0 ['GPR17|p.R333Afs*29|1|0.34|ENSG00000144230|chr2:127651647-127651647|C/-|frameshift_variant', 'ENSG00000144230|ENST00000486700|GPR17', 'nc|ENSG00000144230|Q13304|GPR17', 'ENST00000486700.1_1_2:128403737-128409326:+|nuORF'] 8441 5434 ATPAGHPV True NCI_RA007_Epitope_Rep5 748.38678791124 748.38568993586 27.589 2 -1.206477857497069 0.3708832799741891 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 99546 8989 SIEAELHISYR True H1975_Epitope_Rep3 1316.6724647988801 1316.6713699358602 39.571 2 -1.206495371115211 0.3708832799741891 1.0 ['ENSG00000244476|ENST00000472091|ERVFRD-1'] 8710 13647 AVAQFKKY True PC9_epitope_Rep4 953.5334521449299 953.53234993586 60.385 2 -1.2065389459146216 0.37088648434010024 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 123976 10549 VGSARALR True NCI_RA007_Epitope_Rep4 828.49298431528 828.49188993586 47.422 2 -1.2065398704218242 0.37088648434010024 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 4022 5476 AHFIYVYP True H1975_Epitope_Rep3 1008.5069030439199 1008.50580993586 26.116 2 -1.2068050278879212 0.3709020970343715 1.0 ['MLANA|p.G11V|1|0.14|ENSG00000120215|chr9:5892506-5892506|G/T|missense_variant'] 99352 7072 SHTANILP True PC9_epitope_Rep3 851.4501164437901 851.44900993586 32.213 2 -1.2068554691108715 0.3709020970343715 1.0 ['GLIPR1|p.S146Kfs*13|1|0.12|ENSG00000139278|chr12:75490420-75490421|-/A|frameshift_variant', 'nc|ENSG00000139278|P48060-2|GLIPR1', 'ENSG00000139278|ENST00000266659|GLIPR1'] 11434 5158 DEWTPRQQVKP True NCI_RA007_Epitope_Rep1 1382.6942628726201 1382.69260490379 24.146 3 -1.2068865753342692 0.37090990309091587 1.0 ['PRDM9|p.E93D|1|0.17|ENSG00000164256|chr5:23510005-23510005|A/T|missense_variant'] 81518 4840 PLHFLLPG True PC9_epitope_Rep1 892.5170738047999 892.51596993586 23.486 2 -1.2068955570401363 0.3709117077770609 1.0 ['ENSG00000109775|ENST00000264689|UFSP2'] 23456 23772 EVTLIDHSEEI True H1975_Epitope_Rep1 1283.6245115469499 1283.62340993586 98.678 2 -1.2069493448531823 0.3709117077770609 1.0 ['ENSG00000171502|ENST00000370571|COL24A1', 'nc|ENSG00000171502|Q17RW2-2|COL24A1'] 89736 8711 RADLAYTLEP True NCI_RA007_Epitope_Rep3 1147.5873381925899 1147.58569490379 41.348 3 -1.2070012759853201 0.3709117077770609 1.0 ['TMEM132A|p.E204D|1|0.08|ENSG00000006118|chr11:60928706-60928706|G/T|missense_variant'] 38138 21336 HDARLLRTIP True NCI_RA007_Epitope_Rep2 1190.68838964654 1190.6867549037902 88.277 3 -1.2070563122364326 0.3709117077770609 1.0 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4'] 19460 3903 ELNKPPLGP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 20.056 2 -1.2070601728954773 0.3709117077770609 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 16331 12390 EEHKPVAVP True PC9_epitope_Rep3 1004.5290950404798 1004.52798993586 52.688 2 -1.2071803785433637 0.37092131708890597 1.0 ['UBN1|p.Q794Kfs*51|1|0.07|ENSG00000118900|chr16:4874784-4874784|G/-|frameshift_variant', 'nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1', 'ENST00000587027.1_1_16:4909049-4918847:+|nuORF'] 83073 12435 PSLSERQEIFT True PC9_epitope_Rep1 1305.65648038157 1305.65538993586 52.694 2 -1.2072370565177621 0.37092131708890597 1.0 ['MAN2B2|p.L709Wfs*3|1|0.27|ENSG00000013288|chr4:6609912-6609912|C/-|frameshift_variant', 'nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 19246 17449 ELIYKQPAV True PC9_epitope_Rep3 1059.59644632431 1059.5953499358602 72.292 2 -1.2072538526022782 0.37092131708890597 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'ENST00000496526.5_1_3:9870593-9876502:+|nuORF', 'ENST00000473661.5_1_3:9867594-9876502:+|nuORF', 'nc|ENSG00000214021|Q9Y4R7-5|TTLL3', 'nc|ENSG00000214021|Q9Y4R7|TTLL3'] 64195 11221 LPGIHVSA True PC9_epitope_Rep5 792.4493881678 792.44828993586 48.151 2 -1.2072671829056516 0.37092131708890597 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 125287 11390 VILTERVSL True NCI_RA007_Epitope_Rep4 1028.62299542532 1028.62188993586 50.725 2 -1.207295981044999 0.37092131708890597 1.0 ['nc|ENSG00000150527|Q96PC5-2|MIA2'] 10696 14266 CRGAGQCP True H1975_Epitope_Rep2 790.3214278567 790.3208749679301 60.023 1 -1.207307526877928 0.37092131708890597 1.0 ['ZFP57|p.R423Gfs*10|1|0.23|ENSG00000204644|chr6:29672593-29672593|G/-|frameshift_variant', 'nc|ENSG00000204644|Q9NU63-2|ZFP57', 'ENSG00000204644|ENST00000376883|ZFP57', 'ZFP57|p.Q260Rfs*11|1|0.15|ENSG00000204644|chr6:29673081-29673081|G/-|frameshift_variant'] 126426 23860 VLKKVIRHKRQ True H1975_Epitope_Rep2 1403.9201209168698 1403.9184749037902 98.288 3 -1.2073559688639994 0.37093692620713614 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 30810 10488 GANVSNIQL True PC9_epitope_Rep4 914.48214484806 914.48104993586 48.058 2 -1.207367964693375 0.37093692620713614 1.0 ['nc|ENSG00000123106|Q7Z6B0-3|CCDC91', 'nc|ENSG00000123106|Q7Z6B0-2|CCDC91', 'ENST00000535520.5_1_12:28412355-28702103:+|nuORF', 'ENSG00000123106|ENST00000536442|CCDC91', 'ENST00000540401.5_1_12:28421609-28702103:+|nuORF'] 57036 7316 LDRVHEDL True PC9_epitope_Rep4 995.5036085686298 995.50250993586 35.47 2 -1.2073806655402912 0.3709571366540537 1.0 ['ENSG00000103404|ENST00000219689|USP31', 'ENST00000574408.5_1_17:9559773-9578252:+|nuORF', 'nc|ENSG00000154914|Q70EL4-4|USP43', 'ENSG00000154914|ENST00000285199|USP43'] 127451 11160 VNIQAQAQSI True PC9_epitope_Rep6 1070.5720224816198 1070.57092993586 53.879 2 -1.2074106025533613 0.3709773465995087 1.0 ['ENSG00000170920|ENST00000305444|OR7G3'] 127380 21241 VNDLLQENEQL True H1975_Epitope_Rep2 1313.64630962069 1313.64520993586 87.909 2 -1.2074402921901388 0.3709975560435198 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 117920 12407 TWRWPWLRWWQ True NCI_RA007_Epitope_Rep4 1699.8524352798697 1699.8513299358601 54.722 2 -1.207501580843995 0.37101316230197623 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 21496 7035 ERLQELYSEQK True NCI_RA007_Epitope_Rep2 1421.7150578868498 1421.7134249037902 31.988 3 -1.2075038867162315 0.37101316230197623 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2'] 17844 5320 EHVAQTPTPGG True NCI_RA007_Epitope_Rep2 1092.5199869087598 1092.5188899358602 25.315 2 -1.207612374957107 0.3710333705495596 1.0 ['ENST00000487577.5_1_22:50968091-50968379:-|nuORF'] 14864 5100 DVYLGRNK True NCI_RA007_Epitope_Rep2 963.5137793295099 963.51268993586 24.462 2 -1.2077036287555263 0.3710535782957661 1.0 ['ENSG00000188991|ENST00000344941|SLC15A5'] 5454 18423 ALVPDELLK True NCI_RA007_Epitope_Rep1 996.5855472874399 996.58444993586 75.798 2 -1.2077944939764602 0.37109399228412293 1.0 ['ENSG00000086015|ENST00000361297|MAST2', 'nc|ENSG00000086015|Q6P0Q8-2|MAST2'] 122709 5262 VGGGQKVR True PC9_epitope_Rep6 799.4664352142698 799.46532993586 28.026 2 -1.2077966817519874 0.37109399228412293 1.0 ['ENSG00000106397|ENST00000223127|PLOD3', 'ENST00000478082.5_1_7:100856177-100861250:-|nuORF'] 22483 4463 ETFNSPSMYIA True H1975_Epitope_Rep3 1258.55398945898 1258.55288993586 22.287 2 -1.207898546809757 0.3711344042671959 1.0 ['ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 41720 5052 IALETAMT True PC9_epitope_Rep3 848.43135514516 848.43024993586 24.519 2 -1.207931224128585 0.3711344042671959 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 15237 7186 EAEKKEEKEKK True H1975_Epitope_Rep1 1374.7354589782597 1374.73436993586 32.66 2 -1.207961841380507 0.3711500055819492 1.0 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 17163 21638 EGRKRWKRK True H1975_Epitope_Rep2 1242.7421565548996 1242.74050490379 89.51 3 -1.208027409046202 0.3711500055819492 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 65682 14115 LSAQTREPRQW True H1975_Epitope_Rep2 1370.7054962626598 1370.70438993586 59.448 2 -1.2080494051065758 0.37115320209876085 1.0 ['ENSG00000181234|ENST00000435159|TMEM132C'] 63247 14572 LLSLIHLV True PC9_epitope_Rep6 906.59023874506 906.58914993586 67.948 2 -1.2080764394440244 0.37115320209876085 1.0 ['ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4'] 3177 17938 AGEAQDALWL True PC9_epitope_Rep6 1072.5189242795998 1072.5178299358602 81.625 2 -1.2081941225301542 0.37123542545274124 1.0 ['ENST00000488748.1_1_20:60777823-60778294:+|nuORF'] 18058 13391 EIFVNFMEPCY True H1975_Epitope_Rep2 1390.59374609598 1390.59208490379 56.643 3 -1.2082971508272866 0.37123720930232557 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'ENST00000525561.1_1_9:134008494-134010392:+|nuORF'] 30476 8880 GAGALPEAA True NCI_RA007_Epitope_Rep3 755.38136817763 755.3808149679301 42.019 1 -1.2083140845429978 0.37123720930232557 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 25628 6374 FENLRKFWDLE True NCI_RA007_Epitope_Rep1 1495.74596409231 1495.7443049037902 28.819 3 -1.2083596682948097 0.37123720930232557 1.0 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2'] 891 4689 ADKPETTK True NCI_RA007_Epitope_Rep3 888.45526139388 888.45416993586 25.389 2 -1.208400661485448 0.37123720930232557 1.0 ['ENSG00000228278|ENST00000431067|ORM2', 'ENSG00000229314|ENST00000259396|ORM1'] 99794 19905 SIKEVIQP True PC9_epitope_Rep1 912.5280324113198 912.52692993586 81.382 2 -1.208437471175093 0.37123720930232557 1.0 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4'] 79760 10671 PEAVISGL True PC9_epitope_Rep2 784.43306939732 784.43196993586 46.358 2 -1.2084833078164303 0.37128221665467714 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 27075 7423 FLFYFIYFIFR True NCI_RA007_Epitope_Rep3 1574.8325942687395 1574.83093490379 36.324 3 -1.2085604437999733 0.37130241730437696 1.0 ['ENST00000590478.1_1_17:33569582-33569933:-|nuORF'] 135558 21844 WKTLKMLNFRL True PC9_epitope_Rep6 1448.8326113520798 1448.8315099358601 96.925 2 -1.2085718727191828 0.37131021481371235 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 48663 13115 KASMVLFL True PC9_epitope_Rep4 907.5201105799099 907.51900993586 58.342 2 -1.2086154709503925 0.3713258092521394 1.0 ['nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant'] 80425 18588 PGKLTGLRRR True NCI_RA007_Epitope_Rep4 1152.7203584811598 1152.7192699358602 80.406 2 -1.2086210217745001 0.3713258092521394 1.0 ['ENST00000479212.5_1_3:113627916-113664322:+|nuORF', 'nc|ENSG00000178075|Q8IYS0-2|GRAMD1C', 'ENSG00000178075|ENST00000358160|GRAMD1C', 'ENST00000471031.1_1_3:113653357-113655330:+|nuORF'] 60784 26116 LHSKLISGG True PC9_epitope_Rep5 910.52361573722 910.52250993586 106.12 2 -1.2087414140477957 0.37134140291695605 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 89261 21674 QVVIWRKLLTT True PC9_epitope_Rep6 1355.8289058706298 1355.8278099358602 96.254 2 -1.2087704232211756 0.37134140291695605 1.0 ['ENST00000518829.5_1_8:94717221-94722089:+|nuORF'] 4124 22905 AHSPCYGRLEV True NCI_RA007_Epitope_Rep5 1230.5815416195 1230.5798849037901 95.326 3 -1.208808106646323 0.3713616013294805 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 123473 3857 VGPCCTCCC True NCI_RA007_Epitope_Rep1 887.2468085580699 887.24570993586 19.014 2 -1.2089760932924214 0.37138179924101494 1.0 ['nc|ENSG00000112212|Q5TGU0-2|TSPO2'] 36342 3986 GVEQRWETMP True PC9_epitope_Rep3 1231.56555720219 1231.5639149037902 20.442 3 -1.2090940623219126 0.3713849893347884 1.0 ['ENST00000594286.5_1_19:53625810-53636169:-|nuORF'] 77721 14584 NTLERREKHEK True PC9_epitope_Rep6 1438.7640737679396 1438.7629699358602 67.994 2 -1.2091057037771706 0.3713849893347884 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 27572 22564 FNIHPPLKR True PC9_epitope_Rep4 1120.65054758584 1120.64944993586 95.032 2 -1.2091382356383096 0.3713927849498369 1.0 ['ENST00000441284.5_2_13:46917522-46942212:-|nuORF', 'nc|ENSG00000102445|Q9H714-6|RUBCNL', 'nc|ENSG00000102445|Q9H714-3|RUBCNL', 'nc|ENSG00000102445|Q9H714-4|RUBCNL', 'ENSG00000102445|ENST00000429979|RUBCNL'] 97939 7850 SENIPVHPHDY True NCI_RA007_Epitope_Rep1 1306.59421447818 1306.5931099358602 34.525 2 -1.2092134754027144 0.371400580371537 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF'] 57846 6667 LEEWGRGLS True PC9_epitope_Rep1 1045.5192586327698 1045.5181699358602 30.449 2 -1.2092705339754692 0.37141617063492066 1.0 ['ENST00000373783.2_1_10:64565867-64565909:+|nuORF'] 107053 6889 SVGDSRAIL True PC9_epitope_Rep6 916.4977949122 916.49668993586 35.407 2 -1.209293882662699 0.37141617063492066 1.0 ['ENSG00000163644|ENST00000608933|PPM1K'] 126759 25687 VLPGKKKKKT True PC9_epitope_Rep3 1125.75976368165 1125.75811490379 104.34 3 -1.2092984119119259 0.3714363661164916 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 48318 22628 IYRIISSRR True PC9_epitope_Rep4 1162.69347502698 1162.6923699358601 95.267 2 -1.2093374114349658 0.3714675429350859 1.0 ['ENSG00000110756|ENST00000349215|HPS5', 'nc|ENSG00000110756|Q9UPZ3-2|HPS5'] 88397 21757 QSLLRMLFKRN True PC9_epitope_Rep6 1404.8023738529598 1404.80126993586 96.58 2 -1.209367407431483 0.3714675429350859 1.0 ['ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 28389 2846 FRYKDFLYFLT True H1975_Epitope_Rep1 1511.7812869718696 1511.77963490379 14.578 3 -1.209392710659559 0.3714675429350859 1.0 ['ENSG00000186526|ENST00000612078|CYP4F8'] 62559 2831 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 14.536 2 -1.209407070417172 0.3714675429350859 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 7095 7897 AQTDPFPSL True PC9_epitope_Rep3 974.4709114580199 974.46980993586 35.359 2 -1.209605017665159 0.37150190326220384 1.0 ['ENST00000557662.1_1_14:24808931-24809147:-|nuORF', 'ENST00000216274.9_1_14:24808704-24809147:-|nuORF'] 128606 17578 VPTTSLVL True NCI_RA007_Epitope_Rep3 828.49566965388 828.49456993586 77.103 2 -1.2096162192738686 0.37150190326220384 1.0 ['ENST00000369528.9_2_1:115314278-115314449:-|nuORF'] 119698 5751 VAVPPEATV True PC9_epitope_Rep2 881.4858332461699 881.48472993586 27.514 2 -1.2096268164634116 0.37150190326220384 1.0 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2', 'ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 56929 8523 LDQKFIQWFQR True NCI_RA007_Epitope_Rep1 1507.79358299107 1507.79194490379 37.153 3 -1.2096557813815942 0.37150190326220384 1.0 ['RGL1|p.P472L|1|0.18|ENSG00000143344|chr1:183904914-183904914|C/T|missense_variant'] 10720 4572 CRSCWHWRH True PC9_epitope_Rep4 1269.53963432121 1269.5385299358602 24.083 2 -1.209672987401955 0.37150190326220384 1.0 ['nc|ENSG00000214575|Q9BZB8-4|CPEB1', 'nc|ENSG00000214575|Q9BZB8-2|CPEB1', 'nc|ENSG00000214575|Q9BZB8-3|CPEB1', 'nc|ENSG00000214575|Q9BZB8|CPEB1', 'ENSG00000214575|ENST00000684509|CPEB1'] 117484 5408 TVRDKIYD True NCI_RA007_Epitope_Rep5 1008.5240096600398 1008.52290993586 27.49 2 -1.2096808017610656 0.37150190326220384 1.0 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L', 'ENST00000488845.1_1_7:21941942-21945270:-|nuORF'] 67461 22657 LSSRRIEFYKE True PC9_epitope_Rep5 1426.75686312918 1426.7557699358601 92.151 2 -1.209720569988335 0.37152209492635024 1.0 ['ENST00000552641.5_1_2:143913059-144194625:+|nuORF', 'ENSG00000075884|ENST00000295095|ARHGAP15'] 2109 11604 AELGRVLVP True H1975_Epitope_Rep2 952.5705659296399 952.56946993586 49.701 2 -1.2097698074815095 0.37152988729495495 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4'] 125676 23537 VKLNLALA True PC9_epitope_Rep6 840.5432885526399 840.54274496793 103.68 1 -1.2099864964263918 0.37158727403476577 1.0 ['nc|ENSG00000186919|Q401N2-2|ZACN', 'ZACN|p.L253Cfs*10|1|0.1|ENSG00000186919|chr17:76081626-76081626|G/-|frameshift_variant', 'ENSG00000186919|ENST00000334586|ZACN'] 20149 10474 ENDSQNM[Oxidation]M[Oxidation]ES True H1975_Epitope_Rep2 1215.40198290555 1215.40088993586 45.305 2 -1.2100137516903138 0.371595065402021 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 19998 15071 ELWVRDSP True PC9_epitope_Rep2 1000.4977949121999 1000.49668993586 63.229 2 -1.210159946106387 0.37160285657607617 1.0 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'CASP5|p.G321V|1|0.14|ENSG00000137757|chr11:104999019-104999019|C/A|missense_variant', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 7307 17424 ARKFFLFYRQ True NCI_RA007_Epitope_Rep3 1374.7560752835398 1374.7549699358601 76.448 2 -1.210171078107126 0.3716060403183813 1.0 ['nc|ENSG00000103599|Q86VS3-4|IQCH', 'nc|ENSG00000103599|Q86VS3-2|IQCH', 'ENSG00000103599|ENST00000335894|IQCH', 'nc|ENSG00000103599|Q86VS3-3|IQCH'] 49666 21234 KGNVVLKGEL True PC9_epitope_Rep3 1055.6338944621898 1055.63278993586 86.968 2 -1.2101715087612281 0.3716060403183813 1.0 ['RAB3GAP1|p.E741Ifs*5|1|0.06|ENSG00000115839|chr2:135153807-135153808|-/ATTA|frameshift_variant', 'nc|ENSG00000115839|Q15042-4|RAB3GAP1', 'ENSG00000115839|ENST00000264158|RAB3GAP1', 'nc|ENSG00000115839|Q15042-3|RAB3GAP1'] 883 7186 ADILDKVIER True PC9_epitope_Rep4 1170.66083748602 1170.65920490379 34.943 3 -1.2101753740378962 0.37161701441836825 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 79992 12583 PFAGGHPA True NCI_RA007_Epitope_Rep4 752.3605731634 752.36002496793 55.42 1 -1.2101803168088596 0.37161701441836825 1.0 ['ENSG00000171223|ENST00000302754|JUNB'] 141730 5906 YTWRWVWSWEW True NCI_RA007_Epitope_Rep1 1683.7622828627896 1683.76063490379 27.025 3 -1.2102782306513324 0.37161701441836825 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 19281 9692 ELKLDQPFIDC True H1975_Epitope_Rep2 1319.64313881655 1319.6414849037901 42.262 3 -1.2103527668808167 0.37161877370887364 1.0 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 121141 12449 VERVLSGGLCP True PC9_epitope_Rep3 1128.59612905448 1128.59502993586 52.909 2 -1.2104501983121443 0.37161877370887364 1.0 ['ZNF582|p.V71L|1|0.09|ENSG00000018869|chr19:56390022-56390022|C/A|missense_variant'] 101921 21951 SLPVPYTLP True PC9_epitope_Rep1 985.54843350273 985.54732993586 89.254 2 -1.210456226263304 0.37161877370887364 1.0 ['ENSG00000006659|ENST00000392052|LGALS14'] 127000 12069 VLRTLRDTPM True PC9_epitope_Rep2 1200.66487732064 1200.66322490379 51.736 3 -1.2104725593429282 0.37161877370887364 1.0 ['ENSG00000163959|ENST00000296327|SLC51A'] 46101 5294 ISHQVSFSY True H1975_Epitope_Rep3 1066.5083595959 1066.5072699358602 25.442 2 -1.2104969026321952 0.37161877370887364 1.0 ['nc|ENSG00000115840|O75746-2|SLC25A12', 'ENSG00000115840|ENST00000422440|SLC25A12'] 127425 12238 VNFRQHSL True PC9_epitope_Rep5 999.52501271955 999.52390993586 52.059 2 -1.210560339986795 0.3716389601695861 1.0 ['ENST00000258963.7_1_17:56051264-56051366:-|nuORF'] 69090 11151 LTRDETNYGIP True PC9_epitope_Rep1 1277.62518025329 1277.6240899358602 47.776 2 -1.2105805438873778 0.3716467496405018 1.0 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 8537 9010 ATTPDWFSYFF True NCI_RA007_Epitope_Rep2 1380.60265390356 1380.60154993586 39.648 2 -1.2107483595955963 0.371670116894547 1.0 ['SVA_D_dup445|chr5:69514530-69516541:-|5.086170895852312|0.1334218778948128|5.25|538.0|33|3|sense'] 122353 3321 VGDFVWWPR True H1975_Epitope_Rep3 1160.5767139392399 1160.57506490379 17.544 3 -1.2107856813442632 0.371670116894547 1.0 ['MUS81|p.V311Wfs*46|1|0.18|ENSG00000172732|chr11:65863689-65863689|G/-|frameshift_variant'] 63626 23704 LMIYFYREE True H1975_Epitope_Rep1 1262.6005457285798 1262.59944993586 98.409 2 -1.210803459217984 0.371670116894547 1.0 ['ENSG00000151790|ENST00000536354|TDO2', 'ENST00000510293.1_1_4:156835507-156839956:+|nuORF'] 11282 5138 DEHEKEQYC True H1975_Epitope_Rep2 1179.4502526664298 1179.44914993586 24.84 2 -1.2108581116138557 0.3717026973423245 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 112726 15492 TLGTLQPPD True PC9_epitope_Rep3 940.48656152216 940.48601496793 64.741 1 -1.2108957397695834 0.37170587797803506 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 27659 10960 FPFSYIENVYY True H1975_Epitope_Rep2 1440.6601687796801 1440.65851490379 47.186 3 -1.2109049435729513 0.37170587797803506 1.0 ['ENST00000228827.7_1_12:110890303-110890486:-|nuORF'] 116425 19506 TTKNQKGRKV True NCI_RA007_Epitope_Rep5 1158.6833042660999 1158.6816449037901 81.916 3 -1.210944191314482 0.3717632475983886 1.0 ['nc|ENSG00000128513|Q9NUX5-2|POT1', 'ENSG00000128513|ENST00000357628|POT1'] 131718 12717 VTPASQSEMPD True PC9_epitope_Rep1 1160.50195388612 1160.50084993586 53.788 2 -1.210987645118355 0.3717710347563092 1.0 ['nc|ENSG00000184182|Q969M7-5|UBE2F'] 22134 8807 ESRLWRQMLHK True H1975_Epitope_Rep1 1482.7877864179798 1482.78668993586 38.803 2 -1.211010511767001 0.3717742135402464 1.0 ['nc|ENSG00000161249|Q6E0U4-9|DMKN'] 92578 5590 RMPWPRQQGW True H1975_Epitope_Rep3 1340.6560439724399 1340.65494993586 26.543 2 -1.211046072826341 0.3717742135402464 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 126698 6836 VLPEYLDRN True NCI_RA007_Epitope_Rep1 1117.5767735088898 1117.57566993586 30.596 2 -1.2111947834153922 0.37181918467011243 1.0 ['ENSG00000159459|ENST00000290650|UBR1', 'nc|ENSG00000159459|Q8IWV7-2|UBR1'] 70026 9230 LVMIAILHF True NCI_RA007_Epitope_Rep1 1055.6201589743498 1055.6190699358601 39.902 2 -1.2112315755404437 0.37182093103961134 1.0 ['ENSG00000237110|ENST00000434551|TAAR9', 'TAAR9|p.V81Wfs*5|1|0.29|ENSG00000237110|chr6:132538529-132538529|G/-|frameshift_variant'] 60677 19225 LHMKTLLPVSK True PC9_epitope_Rep1 1265.75296404905 1265.75131490379 78.747 3 -1.2112390488478573 0.37182093103961134 1.0 ['ENSG00000106804|ENST00000223642|C5'] 133335 23928 VVVCGCCL True H1975_Epitope_Rep3 794.3488884745 794.3483349679301 99.752 1 -1.2112621547192994 0.37182093103961134 1.0 ['ENST00000564284.1_1_16:28841101-28842119:+|nuORF'] 71578 26666 MCPFGCHC True NCI_RA007_Epitope_Rep1 896.2801572916799 896.27960496793 110.48 1 -1.2112621981105112 0.37182093103961134 1.0 ['ENSG00000182492|ENST00000331595|BGN'] 11677 15652 DGTGRWRAGL True PC9_epitope_Rep5 1087.55229009655 1087.55118993586 65.217 2 -1.2112839913124673 0.37182093103961134 1.0 ['ENSG00000146950|ENST00000380913|SHROOM2'] 58752 6263 LESEKKAVI True NCI_RA007_Epitope_Rep3 1015.5913609438699 1015.59026993586 31.637 2 -1.2113611694326314 0.3718488957192078 1.0 ['nc|ENSG00000106278|P23471-3|PTPRZ1', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'PTPRZ1|p.E2050Kfs*21|1|0.36|ENSG00000106278|chr7:122051489-122051489|G/-|frameshift_variant'] 105753 8561 SSGERWIRY True NCI_RA007_Epitope_Rep1 1152.5676058075198 1152.56650993586 37.302 2 -1.2113685325858972 0.3718488957192078 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 4291 14569 AIHNPFRP True PC9_epitope_Rep1 950.50863437942 950.50752993586 60.864 2 -1.2113927138187404 0.37185668075402484 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'AMY2B|p.A275Qfs*18|1|0.25|ENSG00000240038|chr1:103574338-103574338|G/-|frameshift_variant', 'AMY1A|p.W331*|1|0.06|ENSG00000237763|chr1:103660473-103660474|GG/-|frameshift_variant', 'nc|ENSG00000240038|P19961-2|AMY2B'] 66440 10723 LSGPVEDAALR True NCI_RA007_Epitope_Rep1 1126.59823722946 1126.5971499358602 45.702 2 -1.2115439353275534 0.3718644655958755 1.0 ['ENST00000378970.4_1_X:30326590-30326719:-|nuORF'] 123186 10826 VGLAYFAA True PC9_epitope_Rep1 810.42759009406 810.42648993586 46.528 2 -1.2117987932381022 0.37190799583601847 1.0 ['KCNK10|p.E467Rfs*38|1|0.38|ENSG00000100433|chr14:88185754-88185754|G/-|frameshift_variant', 'nc|ENSG00000100433|P57789|KCNK10', 'nc|ENSG00000100433|P57789-4|KCNK10', 'ENSG00000100433|ENST00000319231|KCNK10', 'KCNK2|p.S305R|1|0.66|ENSG00000082482|chr1:215195044-215195044|C/A|missense_variant', 'nc|ENSG00000082482|O95069-2|KCNK2', 'nc|ENSG00000082482|O95069-3|KCNK2', 'ENSG00000082482|ENST00000444842|KCNK2'] 9665 12747 AYESIRVSS True PC9_epitope_Rep5 1010.50327421546 1010.50216993586 54.038 2 -1.2118638701433704 0.37190799583601847 1.0 ['FSCB|p.P196Lfs*35|1|0.31|ENSG00000189139|chr14:44506401-44506401|G/-|frameshift_variant', 'FSCB|p.A557Lfs*13|1|0.4|ENSG00000189139|chr14:44505320-44505320|A/-|frameshift_variant', 'ENSG00000189139|ENST00000340446|FSCB'] 104879 13346 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 58.021 2 -1.211884583524314 0.37190799583601847 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 120401 10712 VEELRDRVN True NCI_RA007_Epitope_Rep2 1128.58873517492 1128.58817496793 46.266 1 -1.211896983734759 0.37190799583601847 1.0 ['RAG1|p.K780N|1|0.19|ENSG00000166349|chr11:36575644-36575644|A/T|missense_variant'] 63388 15590 LLVFFFMFL True PC9_epitope_Rep2 1175.64531109303 1175.64367490379 65.243 3 -1.2119457306576666 0.3719281722082461 1.0 ['ENST00000399537.8_1_7:5346469-5346640:-|nuORF'] 32384 18188 GFMPLFPRL True PC9_epitope_Rep1 1076.5841078188 1076.5830099358602 74.75 2 -1.2120479252996834 0.3719731330706124 1.0 ['ENST00000477192.5_1_10:81585177-81585291:-|nuORF'] 73 6060 AAAGTPHRVP True PC9_epitope_Rep4 975.52501271955 975.52390993586 30.305 2 -1.2120722444539815 0.3719763061366115 1.0 ['ENST00000406424.8_1_17:1418770-1419246:-|nuORF'] 23382 11446 EVRWFYKEDKK True NCI_RA007_Epitope_Rep1 1526.7881632574597 1526.78706993586 48.486 2 -1.2120769855002 0.3719763061366115 1.0 ['nc|ENSG00000100523|Q8NEL9-2|DDHD1', 'nc|ENSG00000100523|Q8NEL9-4|DDHD1', 'ENSG00000100523|ENST00000673822|DDHD1'] 67235 20668 LSRNDAVDV True PC9_epitope_Rep1 987.4985231881899 987.4974299358599 84.323 2 -1.2120883064422725 0.37198408862783006 1.0 ['ENSG00000274588|ENST00000611977|DGKK'] 114049 15190 TPEEPFPL True PC9_epitope_Rep2 928.4541987647199 928.45310993586 63.689 2 -1.2121802415719034 0.37203682821348466 1.0 ['nc|ENSG00000123575|Q6PEV8-2|FAM199X', 'ENSG00000123575|ENST00000493442|FAM199X'] 55918 24170 LAQTPLVKCKF True NCI_RA007_Epitope_Rep2 1246.7107648838999 1246.7096699358601 101.52 2 -1.2121816766873443 0.37203682821348466 1.0 ['ENST00000373358.7_2_X:75397480-75397852:+|nuORF'] 40784 14197 HRWRFTCYYYY True H1975_Epitope_Rep3 1656.72960283552 1656.72850993586 59.945 2 -1.2122306198631752 0.3720371219349003 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'LILRB3|p.G292Afs*25|1|0.25|ENSG00000204577|chr19:54221163-54221163|C/-|frameshift_variant', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3'] 106050 6303 STAAQHPD True PC9_epitope_Rep5 825.36169536221 825.36058993586 29.219 2 -1.2122415181930215 0.3720371219349003 1.0 ['nc|ENSG00000108846|O15438-3|ABCC3'] 62554 2487 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 12.847 2 -1.2122570717896233 0.3720371219349003 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 75002 10287 NHQLNVVI True PC9_epitope_Rep6 935.51886470995 935.51776993586 50.257 2 -1.2122607119189024 0.3720371219349003 1.0 ['ENSG00000169914|ENST00000375120|OTUD3', 'ENST00000466697.1_1_1:20216953-20224263:+|nuORF', 'OTUD3|p.N156Mfs*15|1|0.09|ENSG00000169914|chr1:19894460-19894460|C/-|frameshift_variant'] 34457 17570 GPKKTKRE True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 74.368 2 -1.212284966281386 0.3720371219349003 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 92650 18210 RNKTTYKV True NCI_RA007_Epitope_Rep1 1008.5716285587998 1008.57052993586 74.976 2 -1.2123121748713093 0.3720371219349003 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 22594 6927 ETLIQHHDWFF True H1975_Epitope_Rep3 1471.68844921619 1471.68679490379 31.605 3 -1.2123483102819048 0.3720371219349003 1.0 ['ENSG00000107863|ENST00000396432|ARHGAP21', 'ENST00000486374.5_1_10:24873343-24884978:-|nuORF', 'ARHGAP21|p.G1380Rfs*9|1|0.13|ENSG00000107863|chr10:24591238-24591239|-/G|frameshift_variant', 'ENST00000482792.1_1_10:24880396-24883959:-|nuORF', 'ENST00000401578.2_1_6:80775088-80776231:-|nuORF'] 45860 5460 ISDQRVQP True PC9_epitope_Rep3 941.4930438849299 941.49194993586 26.078 2 -1.2123671578744764 0.3720371219349003 1.0 ['nc|ENSG00000221866|Q9HCM2-3|PLXNA4'] 3439 19150 AGKEDIIEWLS True PC9_epitope_Rep4 1259.63976768827 1259.6386699358602 81.757 2 -1.212448907331078 0.3720402929041371 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.T606Nfs*97|1|0.33|ENSG00000205978|chr14:24409604-24409605|-/A|frameshift_variant'] 46295 7716 ISQAQATVPPA True NCI_RA007_Epitope_Rep2 1081.5767735088898 1081.57566993586 34.64 2 -1.2125037886188597 0.3720402929041371 1.0 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2'] 124255 8796 VGTITGDRRI True PC9_epitope_Rep4 1086.61455599994 1086.6134499358602 41.352 2 -1.212587257125621 0.37208063337091596 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 59266 21449 LFFSPLSLSAF True PC9_epitope_Rep5 1227.65396120043 1227.65286993586 87.557 2 -1.2125906990630748 0.37208063337091596 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 114858 8893 TQNVLVPPH True NCI_RA007_Epitope_Rep5 1003.5450794577898 1003.5439899358599 40.869 2 -1.2126093671959555 0.3720838031048282 1.0 ['ENSG00000131697|ENST00000378156|NPHP4', 'nc|ENSG00000131697|O75161-2|NPHP4'] 66304 6144 LSFRARAL True PC9_epitope_Rep2 932.5555845718399 932.55448993586 29.026 2 -1.2126142528409785 0.3720838031048282 1.0 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'ENST00000469059.1_1_10:32634533-32635843:-|nuORF', 'ENST00000480402.1_1_10:32634460-32635843:-|nuORF', 'ENSG00000135999|ENST00000258484|EPC2'] 41851 6987 IAWRYVPINVV True NCI_RA007_Epitope_Rep2 1328.76049195764 1328.75884490379 31.801 3 -1.2127014594613978 0.3721241404943319 1.0 ['nc|ENSG00000100336|Q9BPW4-3|APOL4', 'ENSG00000100336|ENST00000683024|APOL4', 'nc|ENSG00000100336|Q9BPW4|APOL4'] 81142 21253 PKGKAPLRARS True PC9_epitope_Rep6 1179.72002412799 1179.7189299358602 94.603 2 -1.2127199169970715 0.3721241404943319 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 120400 15621 VEELPAERL True PC9_epitope_Rep1 1054.56587447202 1054.56476993586 64.905 2 -1.212788942383805 0.37213969795705987 1.0 ['ENSG00000167676|ENST00000301286|PLIN4'] 76117 865 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 4.7879 3 -1.212822025574972 0.37213969795705987 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 82307 11220 PPHWVLGPV True PC9_epitope_Rep5 1000.5494365622399 1000.54832993586 48.147 2 -1.2128282103376258 0.3721474763993161 1.0 ['ENST00000472378.1_1_22:43555244-43555427:+|nuORF', 'ENSG00000100300|ENST00000337554|TSPO'] 30558 11055 GAGWTVPGIFY True PC9_epitope_Rep5 1166.5760452328998 1166.57494993586 47.51 2 -1.2128417438204961 0.37215236915453703 1.0 ['ENST00000469195.5_3_6:35227336-35227444:+|nuORF'] 18705 11597 ELALFFKGPGP True PC9_epitope_Rep4 1174.6386454894598 1174.63754993586 52.367 2 -1.212846309959397 0.37215236915453703 1.0 ['ENST00000271332.3_1_1:109817722-109817794:+|nuORF'] 1670 8530 AEGAEPVAAW True PC9_epitope_Rep1 999.4661604307498 999.46506993586 37.648 2 -1.2128947423286274 0.37215236915453703 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2'] 122929 24406 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 101.61 2 -1.2129005694562272 0.37215236915453703 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 47160 17832 ITVTSSKAL True PC9_epitope_Rep1 918.53859709502 918.53750993586 73.385 2 -1.2129165829917865 0.37215236915453703 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 121362 9041 VEVMCIVP True PC9_epitope_Rep6 888.4448970343199 888.44378993586 44.823 2 -1.2129721441637313 0.37215236915453703 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF', 'ENST00000511019.1_1_5:14480069-14481814:+|nuORF'] 68884 11199 LTNGLYCF True H1975_Epitope_Rep3 929.43168949833 929.43058993586 48.174 2 -1.2130103028877988 0.37215236915453703 1.0 ['ENSG00000175202|ENST00000311755|HIGD2B'] 39917 19728 HPGGMGIT True NCI_RA007_Epitope_Rep5 768.3588589112401 768.35776993586 82.796 2 -1.213137582016314 0.37218492183435326 1.0 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-2|ROR1'] 11658 5353 DGPNTARK True NCI_RA007_Epitope_Rep5 857.4355290088099 857.43442993586 27.282 2 -1.2131696945720232 0.3721926988492078 1.0 ['nc|ENSG00000154914|Q70EL4-4|USP43', 'ENSG00000154914|ENST00000285199|USP43', 'nc|ENSG00000154914|Q70EL4-2|USP43', 'nc|ENSG00000154914|Q70EL4-3|USP43'] 93923 22362 RRGGRARA True PC9_epitope_Rep2 898.5321637886598 898.53106993586 91.503 2 -1.2133100096654095 0.3722160287377679 1.0 ['ENST00000323544.4_1_15:65134133-65140811:+|nuORF'] 56487 8673 LDETLIHS True PC9_epitope_Rep2 926.47091145802 926.46980993586 38.726 2 -1.21335304248745 0.3722160287377679 1.0 ['ENSG00000175826|ENST00000574322|CTDNEP1'] 57098 12906 LDSRALHDPRV True H1975_Epitope_Rep1 1277.6840325420899 1277.68292993586 54.717 2 -1.2133696189972258 0.3722160287377679 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 72108 17614 MFKLILPV True H1975_Epitope_Rep3 959.5877962169099 959.58668993586 73.59 2 -1.2134113588420952 0.37221774942713814 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 20169 12710 ENFILYEEIGR True NCI_RA007_Epitope_Rep2 1381.6877805098497 1381.6866899358602 54.057 2 -1.21343515466181 0.37221774942713814 1.0 ['ENSG00000168038|ENST00000301831|ULK4', 'ENST00000460978.1_1_3:41979458-41996251:-|nuORF', 'ENST00000497684.1_1_3:41973315-41996251:-|nuORF', 'ULK4|p.G206Afs*22|1|0.2|ENSG00000168038|chr3:41919743-41919743|C/-|frameshift_variant'] 117580 13554 TVSPQFLIDKN True NCI_RA007_Epitope_Rep1 1260.6714021697198 1260.6703099358601 56.732 2 -1.21343524215954 0.37221774942713814 1.0 ['ENST00000588919.5_1_19:1105807-1106568:+|nuORF'] 19692 12335 ELRLLGDELK True H1975_Epitope_Rep1 1184.6764875501597 1184.67538993586 52.476 2 -1.213528802161557 0.37221774942713814 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 130563 15914 VSRLRRRP True H1975_Epitope_Rep2 1038.6522789213398 1038.6511899358602 66.415 2 -1.2135347200128435 0.37221774942713814 1.0 ['ENST00000310653.10_2_11:73471690-73471855:-|nuORF'] 8396 22798 ATLQKELSATS True H1975_Epitope_Rep3 1147.6084675599898 1147.60736993586 95.253 2 -1.2136888843044666 0.372299841458581 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 37193 5084 GVQTPREDWAP True PC9_epitope_Rep5 1254.5992998586198 1254.59764490379 24.582 3 -1.2137536474403225 0.37232632739252675 1.0 ['ENSG00000171456|ENST00000375687|ASXL1'] 16000 10063 EDSDLIYKLY True H1975_Epitope_Rep1 1257.6128842340902 1257.61178993586 43.648 2 -1.2137600372910122 0.37232632739252675 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 136626 12352 WWQPWWWWKLQ True H1975_Epitope_Rep1 1728.8353882333997 1728.8337449037901 52.542 3 -1.2137688556050967 0.37232632739252675 1.0 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 79234 6426 PAPPPKENA True H1975_Epitope_Rep3 919.47633119163 919.4752299358599 29.694 2 -1.2137756035815754 0.37232632739252675 1.0 ['ENST00000432132.2_1_9:98909238-98910135:+|nuORF', 'ENST00000432307.1_1_X:110862947-110863739:-|nuORF', 'nc|ENSG00000063046|P23588-2|EIF4B', 'ENSG00000063046|ENST00000262056|EIF4B'] 121155 14708 VESAVIFRTLY True H1975_Epitope_Rep1 1296.70778767844 1296.7066899358601 61.792 2 -1.2138348989439032 0.37232632739252675 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 82319 16369 PPIMLIGH True NCI_RA007_Epitope_Rep5 876.4891448047999 876.48859496793 69.72 1 -1.213841944457873 0.3723280410175117 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 60817 7495 LHTDGYLRA True H1975_Epitope_Rep2 1044.53524305008 1044.5341499358601 33.779 2 -1.2139066530757743 0.3723280410175117 1.0 ['ENST00000317114.1_1_18:3596827-3597223:+|nuORF'] 138522 17958 YHTEPSFIH True PC9_epitope_Rep4 1129.5192586327698 1129.51762490379 77.129 3 -1.2139178372246122 0.3723280410175117 1.0 ['ENST00000478694.1_1_20:62608437-62611281:-|nuORF'] 23435 8325 EVTEFYVQNEN True H1975_Epitope_Rep3 1370.5990250750995 1370.59792993586 37.006 2 -1.213924648473988 0.3723280410175117 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 7755 8864 ASQQQVEVYKI True H1975_Epitope_Rep1 1291.67721582615 1291.67610993586 39.008 2 -1.2139437435160414 0.3723280410175117 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 93675 25110 RQRVRKKRS True PC9_epitope_Rep1 1212.7639546286398 1212.76231490379 101.47 3 -1.2139715226573022 0.37236058305571723 1.0 ['ENST00000553968.1_1_14:80678377-80678506:-|nuORF'] 29974 25881 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 107.1 3 -1.2140960416073496 0.37236374444265563 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 72110 17356 MFKLILPV True NCI_RA007_Epitope_Rep4 959.5877962169099 959.58668993586 75.164 2 -1.2141165738507007 0.37236374444265563 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 74357 4310 NEQLRLLK True NCI_RA007_Epitope_Rep2 1012.60292868708 1012.60182993586 21.404 2 -1.2141273545977918 0.37237151702786375 1.0 ['ENSG00000162654|ENST00000355754|GBP4'] 138480 11386 YHRHRHIEWA True PC9_epitope_Rep1 1403.6959346384701 1403.69428490379 48.677 3 -1.2142244361935755 0.3723732276639217 1.0 ['TRIM49C|p.P128H|1|0.56|ENSG00000204449|chr11:90035594-90035594|C/A|missense_variant'] 55390 8486 LAERENTGL True PC9_epitope_Rep6 1001.5141732523299 1001.51306993586 42.357 2 -1.214236854201574 0.3723732276639217 1.0 ['nc|ENSG00000155754|Q53TS8-3|C2CD6'] 80850 17444 PHRYAYNI True PC9_epitope_Rep5 1032.5141136826799 1032.51300993586 72.098 2 -1.2142605099396075 0.3723732276639217 1.0 ['ENST00000481054.5_1_3:183861194-183861371:+|nuORF', 'ENST00000465218.2_1_3:183861194-183862728:+|nuORF'] 68127 8101 LTDPKEDPIY True H1975_Epitope_Rep1 1189.5866694862498 1189.5855699358601 36.106 2 -1.2142843244760853 0.3723732276639217 1.0 ['nc|ENSG00000115325|Q99704-3|DOK1', 'ENSG00000115325|ENST00000233668|DOK1'] 2926 5208 AEYPDFFAL True PC9_epitope_Rep3 1071.49131254943 1071.49020993586 25.114 2 -1.2142865847599442 0.3723732276639217 1.0 ['ENSG00000165349|ENST00000374299|SLC7A3'] 133415 22951 VVVRKREGL True H1975_Epitope_Rep3 1054.66111226954 1054.6600099358602 95.887 2 -1.214368599061636 0.37239996038034867 1.0 ['nc|ENSG00000188677|Q9HBI1-3|PARVB', 'ENSG00000188677|ENST00000338758|PARVB', 'nc|ENSG00000188677|Q9HBI1-2|PARVB'] 38729 24113 HGGGKFKS True H1975_Epitope_Rep3 816.4242360491199 816.42312993586 100.47 2 -1.2144278867149283 0.37239996038034867 1.0 ['ENST00000304979.7_1_1:43124098-43124146:+|nuORF'] 41150 5309 HVDKTVVHP True NCI_RA007_Epitope_Rep2 1030.55597849466 1030.55488993586 25.274 2 -1.214460789955316 0.37239996038034867 1.0 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2'] 119471 24824 VARKGGGL True PC9_epitope_Rep4 756.4606215578398 756.45952993586 103.99 2 -1.2146334845301803 0.37239996038034867 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 138778 9853 YITNEERK True PC9_epitope_Rep3 1051.52982331647 1051.5287299358602 42.859 2 -1.2147020579923962 0.37239996038034867 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 123995 4025 VGSEEKKI True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 22.289 2 -1.2147548044969843 0.37239996038034867 1.0 ['CNTN3|p.D43E|1|0.29|ENSG00000113805|chr3:74499712-74499712|A/T|missense_variant'] 127056 11602 VLSRSDPSL True PC9_epitope_Rep2 972.52400966004 972.52290993586 49.952 2 -1.214798732574872 0.37239996038034867 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF'] 61333 8098 LIRTSYEK True NCI_RA007_Epitope_Rep5 1008.5603951687599 1008.55928993586 37.838 2 -1.2148351326633198 0.37239996038034867 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 87597 20389 QQLYTKQPRQY True H1975_Epitope_Rep1 1451.75211210191 1451.75100993586 84.797 2 -1.2148587102610107 0.37239996038034867 1.0 ['MYH13|p.D450Y|1|0.3|ENSG00000006788|chr17:10345532-10345532|C/A|missense_variant'] 119462 25557 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.45952993586 103.99 2 -1.2148616605440854 0.37239996038034867 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 59560 16457 LFTLSLKTS True PC9_epitope_Rep4 1008.58554728744 1008.58444993586 71.271 2 -1.2148674244293758 0.37239996038034867 1.0 ['ENST00000447399.6_1_11:9772021-9772270:+|nuORF'] 104139 8491 SQEMNTLFRFW True PC9_epitope_Rep2 1457.6761702803296 1457.6750699358602 38.026 2 -1.214905622782699 0.37239996038034867 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 74114 8134 NDWKTIGEM True H1975_Epitope_Rep1 1092.4909952796 1092.4898899358602 36.225 2 -1.2149319996309642 0.37239996038034867 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 22959 14058 EVENPEHNDFL True PC9_epitope_Rep5 1341.58370936413 1341.58260993586 59.088 2 -1.2150528385129649 0.37243249266426476 1.0 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 74105 7185 NDSSKAIDVD True PC9_epitope_Rep5 1062.4829326937 1062.48182993586 32.603 2 -1.2151897111774521 0.37243565140954055 1.0 ['NUBPL|p.G102_L104del|1|0.11|ENSG00000151413|chr14:31599301-31599309|GGTTTGCTA/-|inframe_deletion'] 118038 9752 TYFAIDSSTG True PC9_epitope_Rep1 1060.47130538084 1060.47020993586 42.37 2 -1.2151967169210196 0.37243565140954055 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.H1817R|1|0.18|ENSG00000083857|chr4:186621136-186621136|T/C|missense_variant'] 36251 15611 GVDQKSGY True PC9_epitope_Rep6 852.39774651776 852.39664993586 72.253 2 -1.215276656027278 0.3724373576309795 1.0 ['chr16:15114571-15123291|154|33.16|0.0|21.66|-|2|PKD1P6-NPIPP1,None|1'] 89915 3165 RCQARGAP True PC9_epitope_Rep5 857.4290041597297 857.42790993586 17.194 2 -1.2153123657928064 0.3724373576309795 1.0 ['FCRLB|p.T87A|1|0.25|ENSG00000162746|chr1:161723573-161723573|A/G|missense_variant'] 112955 13607 TLLLTAQHW True PC9_epitope_Rep4 1081.59202965021 1081.59092993586 60.233 2 -1.215331870627444 0.3724373576309795 1.0 ['nc|ENSG00000205629|Q9UIC8-2|LCMT1'] 139643 24394 YMISTSET True H1975_Epitope_Rep2 930.4004489397 930.39934993586 100.37 2 -1.21537314042019 0.3724373576309795 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5', 'ADAMTS5|p.G894Vfs*16|1|0.13|ENSG00000154736|chr21:26924165-26924165|C/-|frameshift_variant'] 81552 14091 PLKEEEYRKLR True PC9_epitope_Rep3 1459.8147123584697 1459.81360993586 59.286 2 -1.215373777112226 0.3724373576309795 1.0 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 85192 10736 QEPPPLLPPP True H1975_Epitope_Rep1 1083.59644632431 1083.5953499358602 46.258 2 -1.2154336611523378 0.3724575064684254 1.0 ['ENSG00000159086|ENST00000331923|PAXBP1', 'ENST00000464256.1_1_21:34132086-34144033:-|nuORF', 'nc|ENSG00000159086|Q9Y5B6-3|PAXBP1', 'nc|ENSG00000159086|Q9Y5B6-4|PAXBP1', 'nc|ENSG00000159086|Q9Y5B6-2|PAXBP1'] 46484 11283 ISVKVIDDEEY True PC9_epitope_Rep5 1308.64491263836 1308.6438099358602 48.393 2 -1.2155716112028438 0.3725395528485479 1.0 ['SLC8A1|p.H824Tfs*8|1|0.29|ENSG00000183023|chr2:40139476-40139476|G/-|frameshift_variant', 'nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1'] 57015 7095 LDRMQVQPRWY True H1975_Epitope_Rep1 1490.7452528996598 1490.7436049037901 32.319 3 -1.215625559662523 0.3725550878930428 1.0 ['ENST00000411888.5_1_1:21329234-21415692:-|nuORF'] 82079 23055 PMKRCFKR True NCI_RA007_Epitope_Rep5 1064.5735602184398 1064.57246993586 95.924 2 -1.2156757498994901 0.3725550878930428 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF', 'SUPT20H|p.R270Kfs*11|1|0.21|ENSG00000102710|chr13:37031794-37031795|-/T|frameshift_variant', 'SUPT20H|p.Q639Lfs*24|1|0.05|ENSG00000102710|chr13:37017321-37017322|-/TTTATTAACAATAGTA|frameshift_variant', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H'] 115237 24614 TREAVGTG True H1975_Epitope_Rep3 789.3980808709299 789.39753496793 102.41 1 -1.215712957116664 0.37256285512682435 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'DMKN|p.S385Afs*89|1|0.23|ENSG00000161249|chr19:35502869-35502869|G/-|frameshift_variant', 'nc|ENSG00000161249|Q6E0U4-7|DMKN', 'nc|ENSG00000161249|Q6E0U4-5|DMKN', 'nc|ENSG00000161249|Q6E0U4-6|DMKN', 'nc|ENSG00000161249|Q6E0U4-3|DMKN'] 16689 20300 EERMRRLFQT True H1975_Epitope_Rep1 1364.6983027072397 1364.6972099358602 84.433 2 -1.215812012974744 0.3725783890174913 1.0 ['ENST00000511242.1_1_5:112783941-112824318:-|nuORF', 'ENSG00000171444|ENST00000408903|MCC'] 63405 11317 LLVLGLKAL True NCI_RA007_Epitope_Rep3 938.65283900162 938.65174993586 51.626 2 -1.2158228698476696 0.3725783890174913 1.0 ['nc|ENSG00000197858|O43292-2|GPAA1', 'ENSG00000197858|ENST00000355091|GPAA1', 'ENST00000531593.1_1_8:145139661-145140095:+|nuORF', 'ENST00000530796.1_1_8:145139736-145140383:+|nuORF'] 89280 10973 QVWDWRTDRPR True NCI_RA007_Epitope_Rep2 1513.7538434374098 1513.75274993586 47.292 2 -1.215851492769367 0.37259853436324025 1.0 ['ENST00000493940.2_1_1:22177888-22181121:-|nuORF'] 627 7902 AASKFEVA True PC9_epitope_Rep3 821.4283183700499 821.4272299358599 35.377 2 -1.2158865179711027 0.3726310577458687 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1'] 130907 14896 VTDEDSSH True PC9_epitope_Rep6 888.34610486772 888.34500993586 69.289 2 -1.2159264042959532 0.37264658917895205 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant'] 64196 9177 LPGIHVSA True PC9_epitope_Rep6 792.4493881678 792.44828993586 45.428 2 -1.2159273432673223 0.37264658917895205 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 66672 18204 LSKWLDIIDI True H1975_Epitope_Rep3 1214.69107498514 1214.68996993586 76.293 2 -1.2160245171523252 0.3726621198430479 1.0 ['MAN2A1|p.W223L|1|0.18|ENSG00000112893|chr5:109729474-109729474|G/T|missense_variant'] 142039 13625 YVLLASEQL True PC9_epitope_Rep5 1034.5648118428599 1034.56370993586 57.431 2 -1.2160867196007643 0.3726621198430479 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 103591 17208 SPSQMMPHV True PC9_epitope_Rep1 1012.4470222926399 1012.44592993586 71.009 2 -1.2161106919280764 0.37268226265626936 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 44894 9197 INLQGTKKEE True NCI_RA007_Epitope_Rep5 1158.6244519773 1158.62334993586 42.027 2 -1.2161200760191966 0.3726854143974651 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2', 'SBF2|p.E591Nfs*13|1|0.07|ENSG00000133812|chr11:9962046-9962046|C/-|frameshift_variant', 'ENST00000533661.1_1_11:10038431-10064504:-|nuORF'] 12735 6258 DLEFEEDQR True NCI_RA007_Epitope_Rep4 1179.5043964142699 1179.50328993586 30.675 2 -1.2161414058366367 0.3726854143974651 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 48708 8581 KCNQCFREFR True H1975_Epitope_Rep3 1329.6070451746898 1329.60594993586 37.999 2 -1.2162028290486189 0.3727380746095007 1.0 ['ZNF557|p.K348Tfs*8|1|0.09|ENSG00000130544|chr19:7083512-7083513|-/AACTCAC|frameshift_variant', 'nc|ENSG00000130544|Q8N988|ZNF557', 'ENSG00000130544|ENST00000252840|ZNF557'] 76084 17096 NMLEAVHTI True PC9_epitope_Rep5 1026.51681610462 1026.51570993586 70.781 2 -1.2162054590166589 0.3727380746095007 1.0 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK'] 64715 14412 LPWARELESRE True PC9_epitope_Rep1 1384.70991293676 1384.70880993586 60.259 2 -1.2162582178248336 0.37273976163071326 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 47558 8019 IVTSSLLG True PC9_epitope_Rep1 788.4643695256 788.46326993586 35.666 2 -1.2162893678149893 0.37273976163071326 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 52888 18550 KPGEREIVIT True NCI_RA007_Epitope_Rep5 1140.6502728023197 1140.64861490379 78.176 3 -1.2163209679586973 0.37273976163071326 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ENST00000504142.2_2_5:89924394-89949789:+|nuORF'] 108187 7229 SYGIGPGR True NCI_RA007_Epitope_Rep5 805.40825163181 805.40714993586 34.483 2 -1.2163259808208828 0.37273976163071326 1.0 ['ENST00000424094.6_1_20:57417491-57417566:-|nuORF'] 61731 9991 LLAEMTVG True PC9_epitope_Rep5 832.4364405255999 832.43534993586 43.406 2 -1.2163436773248453 0.37273976163071326 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B'] 136526 15000 WWDIYYTLFEK True H1975_Epitope_Rep1 1562.7445671099797 1562.74397496793 62.944 1 -1.2163502856907265 0.37274752475247525 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 44917 6599 INSAAAQM True PC9_epitope_Rep4 804.37998827864 804.37888993586 32.542 2 -1.2163763152660843 0.37278003985099195 1.0 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1'] 38648 9761 HFLQHPWEV True NCI_RA007_Epitope_Rep4 1191.58252759567 1191.5808749037901 44.394 3 -1.2164095454613157 0.3727878022821217 1.0 ['ENST00000489520.2_1_12:66151931-66152630:-|nuORF'] 23433 8250 EVTEFYVQNEN True H1975_Epitope_Rep2 1370.5990250750995 1370.59792993586 36.687 2 -1.2164754063195127 0.37281570219296073 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 34554 7612 GPSPKQLVSL True NCI_RA007_Epitope_Rep2 1024.59169529704 1024.5905899358602 34.233 2 -1.2164869884741243 0.37281570219296073 1.0 ['ENSG00000185010|ENST00000360256|F8'] 84565 14923 QAVLRIKSVEA True NCI_RA007_Epitope_Rep4 1212.71902106848 1212.7173749037902 64.865 3 -1.216630845111294 0.3728219978219978 1.0 ['ENSG00000177476|ENST00000320002|OR2G3'] 119839 18978 VDDKTIIRVP True PC9_epitope_Rep2 1154.6659228664598 1154.66482993586 78.365 2 -1.2166511168249317 0.3728219978219978 1.0 ['nc|ENSG00000258597|P20848|SERPINA2'] 73679 9026 MYLPPDDP True PC9_epitope_Rep1 946.4106197005799 946.40952993586 39.568 2 -1.21667666156135 0.3728219978219978 1.0 ['ENSG00000183479|ENST00000370231|TREX2', 'nc|ENSG00000183479|Q9BQ50-1|TREX2'] 88746 6274 QTLTLCLGAI True NCI_RA007_Epitope_Rep2 1031.5685173243098 1031.56740993586 29.011 2 -1.2166914550809438 0.3728219978219978 1.0 ['ENSG00000198786|ENST00000361567|MT-ND5'] 56696 11959 LDKRPEPSTL True PC9_epitope_Rep1 1154.6295373577398 1154.62844993586 50.867 2 -1.2167419334081682 0.3728375201088974 1.0 ['OTUD4|p.T948Nfs*31|1|0.15|ENSG00000164164|chr4:145137932-145137933|-/T|frameshift_variant', 'nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000455611.6_1_4:146049153-146095893:-|nuORF'] 61174 19637 LILCGLQPL True PC9_epitope_Rep4 968.5728744287599 968.57176993586 83.651 2 -1.2167730173814573 0.3728375201088974 1.0 ['ENST00000404792.5_2_11:71711556-71712334:+|nuORF'] 38888 5729 HHESHAKVMMY True H1975_Epitope_Rep2 1368.60671082152 1368.60560993586 27.035 2 -1.216835337322374 0.3728700300701637 1.0 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7', 'ENST00000606214.5_1_6:13321275-13325348:-|nuORF'] 79830 7980 PEGLREAGKK True NCI_RA007_Epitope_Rep1 1083.6036569630699 1083.60254993586 35.033 2 -1.216885329842862 0.3728901648270059 1.0 ['ENST00000253048.9_1_19:47597719-47615690:-|nuORF', 'ENST00000597069.1_1_19:47597719-47614164:-|nuORF'] 114140 16412 TPIFYVNAAP True PC9_epitope_Rep1 1091.56514619603 1091.56404993586 67.952 2 -1.2170006027458495 0.3729180587521964 1.0 ['ENSG00000247626|ENST00000282276|MARS2'] 98779 22237 SGHVSLCWRP True NCI_RA007_Epitope_Rep4 1140.5498475683999 1140.54820490379 96.461 3 -1.2170083614268215 0.3729180587521964 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 83178 8159 PSSTEHPVL True PC9_epitope_Rep4 965.4818104948898 965.48070993586 38.838 2 -1.2170604878777085 0.37292120372203524 1.0 ['ENST00000570101.5_1_16:58700792-58701185:-|nuORF'] 131355 7051 VTGRLGVPP True H1975_Epitope_Rep3 894.5287011176598 894.52760993586 32.087 2 -1.2170739869780054 0.37292120372203524 1.0 ['ENST00000562374.1_3_16:75656785-75656947:-|nuORF'] 97710 12547 SEIEILAVDLP True NCI_RA007_Epitope_Rep2 1197.6492697428098 1197.64816993586 53.419 2 -1.2171130183085928 0.37294133659997275 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 44232 24549 IKKTPKKV True NCI_RA007_Epitope_Rep3 940.6433369470799 940.64222993586 106.2 2 -1.2171614318868564 0.3729444808770215 1.0 ['ENSG00000124575|ENST00000244534|H1-3'] 42906 13805 IERNTKPYRK True H1975_Epitope_Rep1 1303.73606811495 1303.7349699358601 58.247 2 -1.2171804451483652 0.3729444808770215 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 100144 11819 SITHYRPV True PC9_epitope_Rep5 971.51886470995 971.51776993586 50.457 2 -1.2172580214168653 0.37298788711134206 1.0 ['ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF'] 69934 20950 LVKKLAKK True NCI_RA007_Epitope_Rep5 926.6640723916598 926.66296993586 87.588 2 -1.2172795149792925 0.37298788711134206 1.0 ['RPL10A|p.M159Nfs*20|1|0.18|ENSG00000198755|chr6:35470340-35470341|-/A|frameshift_variant', 'ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 78383 24508 NYKTLIII True NCI_RA007_Epitope_Rep2 976.5957180483199 976.59516496793 102.95 1 -1.2172949381506968 0.37298788711134206 1.0 ['ENSG00000138604|ENST00000261858|GLCE'] 32856 21697 GHPVPFAT True PC9_epitope_Rep6 824.41808803952 824.41698993586 96.345 2 -1.21730881084508 0.37298788711134206 1.0 ['nc|ENSG00000163638|Q9P2N4-4|ADAMTS9', 'ENSG00000163638|ENST00000498707|ADAMTS9'] 4401 3070 AIPAQQFD True NCI_RA007_Epitope_Rep2 888.4341320264799 888.43302993586 16.556 2 -1.217342369674081 0.372995644857963 1.0 ['ENST00000515740.5_1_4:926277-945448:+|nuORF'] 130955 7026 VTDKTKVP True H1975_Epitope_Rep2 886.5123823471799 886.51128993586 31.95 2 -1.2173668407319416 0.37300340241261987 1.0 ['ENSG00000164530|ENST00000373674|PI16'] 41919 14044 IDAVTRLLEEK True H1975_Epitope_Rep1 1285.7241660185698 1285.7230699358602 59.184 2 -1.2174333366928847 0.3730050723741185 1.0 ['ENST00000469506.3_1_3:42201841-42226383:+|nuORF', 'nc|ENSG00000182606|Q9UPV9-2|TRAK1', 'ENSG00000182606|ENST00000327628|TRAK1', 'nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 47205 20659 IVALDLLSGL True PC9_epitope_Rep4 1012.6168474157199 1012.61574993586 87.622 2 -1.2174797029236581 0.3730050723741185 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF', 'ENST00000426249.1_1_17:18365525-18365891:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 70386 10099 LVTDIDYRNY True H1975_Epitope_Rep1 1270.61936659686 1270.61826993586 43.782 2 -1.2174811748263905 0.3730050723741185 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 25166 15671 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 65.555 2 -1.2175083229401598 0.3730050723741185 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140019 15560 YQDVYVELSHI True PC9_epitope_Rep5 1364.66123140884 1364.6601299358601 64.863 2 -1.217520594753687 0.3730050723741185 1.0 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP'] 87311 23932 QPQPWRWLYPR True PC9_epitope_Rep5 1525.79425169741 1525.7931499358601 97.034 2 -1.2175745333356274 0.3730084116773874 1.0 ['ENST00000484749.5_1_1:228360905-228363211:+|nuORF'] 5453 17923 ALVPDELLK True H1975_Epitope_Rep1 996.5855472874399 996.58499496793 74.652 1 -1.2176355626634552 0.3730084116773874 1.0 ['ENSG00000086015|ENST00000361297|MAST2', 'nc|ENSG00000086015|Q6P0Q8-2|MAST2'] 128233 19537 VPNNLLKLCFL True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.7247549037902 82.036 3 -1.2176360170780312 0.3730084116773874 1.0 ['ENST00000482712.1_1_1:40954849-40956549:+|nuORF'] 3294 15135 AGFIESTFKP True PC9_epitope_Rep1 1095.56006081559 1095.5589699358602 63.038 2 -1.2176476603496365 0.3730084116773874 1.0 ['ENSG00000172071|ENST00000303236|EIF2AK3'] 20994 4007 EQRFRVLWWRR True NCI_RA007_Epitope_Rep2 1630.8956970741797 1630.8946099358602 20.224 2 -1.2176669932287243 0.3730084116773874 1.0 ['ENST00000307340.7_1_1:215963551-215972328:-|nuORF'] 37157 22467 GVQNITAA True PC9_epitope_Rep2 772.40791727864 772.4073649679301 91.908 1 -1.2177162194752489 0.3730084116773874 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 76103 1180 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 6.5011 3 -1.2177227739759737 0.3730084116773874 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 112724 15388 TLGTLQPPD True PC9_epitope_Rep1 940.48656152216 940.48601496793 64.008 1 -1.2177411994163694 0.3730084116773874 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 116805 10689 TVEEKYPY True H1975_Epitope_Rep1 1027.48622716899 1027.4851299358602 46.074 2 -1.2177554022148815 0.3730084116773874 1.0 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 105265 14279 SRLETEIERC True PC9_epitope_Rep4 1234.59758560646 1234.59648993586 62.826 2 -1.217798511605144 0.3730084116773874 1.0 ['ENSG00000165914|ENST00000328459|TTC7B', 'nc|ENSG00000165914|Q86TV6-2|TTC7B'] 796 25027 AAWTAERNLN True PC9_epitope_Rep2 1144.56252042708 1144.5614299358601 101.93 2 -1.2178581408707494 0.37302853749953613 1.0 ['ENSG00000212710|ENST00000391403|CTAGE1'] 86608 13916 QLELHRLI True PC9_epitope_Rep1 1020.6080140675199 1020.60690993586 58.363 2 -1.2178976360221994 0.37303629301600655 1.0 ['ENSG00000166507|ENST00000309979|NDST2', 'nc|ENSG00000166507|P52849-2|NDST2'] 53316 18860 KQLRQRQVF True NCI_RA007_Epitope_Rep5 1201.7043740638499 1201.70272490379 79.39 3 -1.2179897989715915 0.3730488559059988 1.0 ['nc|ENSG00000221977|Q8NGC2|OR4E2', 'ENSG00000221977|ENST00000641524|OR4E2'] 23587 22184 EVYTRVVRR True PC9_epitope_Rep1 1176.6727395823998 1176.6716499358602 90.15 2 -1.2180084864618566 0.3730488559059988 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA'] 56303 11088 LDAQLLQRTGA True H1975_Epitope_Rep1 1184.6513354314798 1184.6502299358601 47.614 2 -1.2180140475172012 0.3730488559059988 1.0 ['ENSG00000196329|ENST00000358647|GIMAP5', 'nc|ENSG00000196329|Q96F15-2|GIMAP5'] 123482 17117 VGPEGAFLPP True PC9_epitope_Rep3 982.5123823471799 982.51128993586 70.994 2 -1.2180574730669167 0.3730488559059988 1.0 ['nc|ENSG00000100299|P15289-2|ARSA', 'nc|ENSG00000100299|P15289|ARSA', 'ENSG00000100299|ENST00000216124|ARSA', 'ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 96980 4870 SAYIKEVEERP True H1975_Epitope_Rep3 1319.6721304457099 1319.67049490379 23.859 3 -1.2180750524719675 0.3730488559059988 1.0 ['ENSG00000130429|ENST00000646101|ARPC1B'] 9267 8486 AVPLVPLT True H1975_Epitope_Rep3 808.50584041476 808.50474993586 37.627 2 -1.218089689019223 0.3730488559059988 1.0 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 123996 6351 VGSEEKKI True NCI_RA007_Epitope_Rep4 888.4916469025999 888.49054993586 31.036 2 -1.218114564133808 0.3730488559059988 1.0 ['CNTN3|p.D43E|1|0.29|ENSG00000113805|chr3:74499712-74499712|A/T|missense_variant'] 45562 21672 IQRWRRYYLPA True PC9_epitope_Rep4 1520.83645086256 1520.8353499358602 91.559 2 -1.218150787905241 0.3730488559059988 1.0 ['ENST00000372070.7_1_1:46016515-46016749:+|nuORF'] 18621 5024 EKSWLWHCSQR True H1975_Epitope_Rep1 1458.6826526431 1458.6815499358602 24.396 2 -1.2181757613430846 0.37305199624004354 1.0 ['ENST00000577083.1_1_16:4491378-4492529:+|nuORF'] 63334 3841 LLTFEDMA True NCI_RA007_Epitope_Rep2 938.4419198288599 938.44082993586 19.574 2 -1.2181811367866628 0.37305199624004354 1.0 ['nc|ENSG00000288393|Q92670|ZNF75CP'] 133271 20408 VVTPPLPA True PC9_epitope_Rep1 792.47454028648 792.47344993586 83.313 2 -1.2182341828165695 0.37305513641873006 1.0 ['ENST00000432329.6_1_2:208467595-208467667:+|nuORF'] 28340 6749 FRSLQDDP True H1975_Epitope_Rep2 976.4614094034798 976.46030993586 30.874 2 -1.2182400255827424 0.37305513641873006 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant', 'NEB|p.L1593Sfs*3|1|0.06|ENSG00000183091|chr2:151666347-151666348|TG/-|frameshift_variant', 'NEB|p.S2098Lfs*2|1|0.41|ENSG00000183091|chr2:151656334-151656356|TTTTTCTTGTACTCCCGATCAGA/-|frameshift_variant'] 139590 4726 YLWLKDCKIN True H1975_Epitope_Rep3 1294.6743793751798 1294.6727249037901 23.305 3 -1.2183485409449977 0.37307839766501355 1.0 ['nc|ENSG00000120802|P42166|TMPO'] 116728 9555 TVDKHYRDF True NCI_RA007_Epitope_Rep4 1179.56727145435 1179.56563490379 43.601 3 -1.2183539656021973 0.37307839766501355 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'KALRN|p.G130Vfs*17|1|0.27|ENSG00000160145|chr3:124633865-124633865|G/-|frameshift_variant', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'ENST00000494648.1_1_3:124174014-124181481:+|nuORF'] 81970 16910 PLTLSPAAPA True PC9_epitope_Rep5 936.5280324113198 936.52748496793 70.058 1 -1.218385348199409 0.37307839766501355 1.0 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 40112 19559 HPYGHRKFI True PC9_epitope_Rep2 1153.61449643029 1153.6133899358601 80.615 2 -1.2184588916536832 0.3730861510302011 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 139426 17400 YLPGGRARIT True NCI_RA007_Epitope_Rep4 1102.6247267608198 1102.62417496793 75.345 1 -1.2185087189041308 0.37308929013109077 1.0 ['ENST00000234296.6_1_2:201822845-201828374:-|nuORF'] 59936 9882 LGGRKLQPLP True H1975_Epitope_Rep3 1077.66586329681 1077.66476993586 43.042 2 -1.2185097708281136 0.37308929013109077 1.0 ['ENST00000267984.3_1_15:81294113-81294617:+|nuORF'] 130706 14200 VSVFYTVIIPV True NCI_RA007_Epitope_Rep2 1235.71656145699 1235.71546993586 59.896 2 -1.2185501698497947 0.37309704307391695 1.0 ['ENSG00000172464|ENST00000544374|OR5AP2'] 128442 5086 VPSAGHIP True PC9_epitope_Rep1 776.41808803952 776.41698993586 24.418 2 -1.2185793684774275 0.3731047958249858 1.0 ['ENST00000464989.5_1_2:220308409-220308667:+|nuORF'] 27134 21860 FLIVFRVLC True PC9_epitope_Rep1 1108.64670807536 1108.6456099358602 88.896 2 -1.2186386156110731 0.3731203007518797 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN1A|p.S940Y|1|0.26|ENSG00000144285|chr2:166037903-166037903|G/T|missense_variant', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 94809 20455 RSQRYLTP True PC9_epitope_Rep6 1019.5512274673898 1019.55067496793 91.396 1 -1.2186412004526679 0.3731203007518797 1.0 ['ENST00000368465.5_2_1:154917379-154917481:-|nuORF'] 34733 6208 GQEKERPCW True PC9_epitope_Rep2 1131.5131277065097 1131.51202993586 29.275 2 -1.218771009213208 0.3731775180856984 1.0 ['ENSG00000182035|ENST00000537425|ADIG'] 73344 22020 MTEETRIVYWI True PC9_epitope_Rep6 1439.7118870827098 1439.7102449037902 97.623 3 -1.21882973431009 0.3732053866224789 1.0 ['ENST00000453574.1_1_X:100673300-100674112:+|nuORF'] 94563 6021 RRRWSQFLFTF True NCI_RA007_Epitope_Rep5 1542.8208007984201 1542.8197099358601 29.843 2 -1.2188440333588835 0.3732053866224789 1.0 ['ENST00000217957.9_3_X:107301321-107310193:+|nuORF'] 28654 11461 FSLYIYVYIYI True H1975_Epitope_Rep1 1455.7689909526698 1455.76788993586 49.065 2 -1.2189113710456714 0.373207043228806 1.0 ['ENST00000501122.2_1_11:65204545-65204752:+|nuORF'] 33903 10229 GLQLRQVL True NCI_RA007_Epitope_Rep5 925.5709002828099 925.56980993586 45.977 2 -1.2189517698403547 0.373207043228806 1.0 ['ENST00000342972.2_1_X:55478539-55478770:+|nuORF'] 120138 12010 VEAIREALVDK True H1975_Epitope_Rep1 1241.69795127073 1241.6968499358602 51.204 2 -1.21896093998609 0.373207043228806 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 44207 14995 IKEDELRESIE True H1975_Epitope_Rep3 1359.68817443267 1359.68706993586 63.068 2 -1.2189680518972248 0.373207043228806 1.0 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 22333 9186 ETDNYTMPS True H1975_Epitope_Rep2 1056.4069908721199 1056.4058899358602 40.287 2 -1.2189695191191463 0.373207043228806 1.0 ['ENST00000489366.2_1_1:46871719-46874871:+|nuORF', 'ENST00000484697.5_1_1:46871424-46877830:+|nuORF', 'ENSG00000117480|ENST00000243167|FAAH'] 104576 5568 SQQTLDTPK True H1975_Epitope_Rep2 1016.5138388991599 1016.51274993586 26.425 2 -1.2190228657116156 0.3732147935652195 1.0 ['UBAP2|p.D873Tfs*30|1|0.22|ENSG00000137073|chr9:33923974-33923974|C/-|frameshift_variant', 'ENSG00000137073|ENST00000379238|UBAP2'] 112356 9462 TLAGWGPG True PC9_epitope_Rep1 757.3758888743698 757.37478993586 41.251 2 -1.21905583558193 0.3732596384499345 1.0 ['ENST00000434376.6_1_17:1543256-1543940:-|nuORF', 'ENST00000263071.8_1_17:1543248-1547228:-|nuORF'] 128548 18526 VPTAAVQASPL True PC9_epitope_Rep4 1052.5866099166 1052.58550993586 79.334 2 -1.2190716577156755 0.3732673879443586 1.0 ['ENSG00000216490|ENST00000407280|IFI30'] 7396 5674 ASAEPYGFR True NCI_RA007_Epitope_Rep4 996.4664947839199 996.46538993586 28.43 2 -1.2191782422520554 0.3732771301778805 1.0 ['ENSG00000131711|ENST00000296755|MAP1B'] 127448 24836 VNIIIILTT True NCI_RA007_Epitope_Rep5 998.6375828603001 998.63648993586 103.02 2 -1.2192187494973552 0.3732771301778805 1.0 ['LTR2C_dup54|chr2:231400712-231401206:+|4.576876258162113|0.310476164059117|3.88|541.0|34|3|anti-sense'] 49624 7631 KGFPCGGGS True PC9_epitope_Rep5 808.3537735307999 808.35266993586 34.299 2 -1.2192362722322 0.3732771301778805 1.0 ['ENST00000586018.5_1_19:19657205-19657403:+|nuORF'] 110461 19412 TFELSMRQSW True PC9_epitope_Rep5 1283.59685733047 1283.59576993586 79.716 2 -1.2192893447025261 0.3732771301778805 1.0 ['ENST00000510488.1_1_3:141190122-141190284:-|nuORF'] 141473 6987 YTHVNEVWP True NCI_RA007_Epitope_Rep5 1143.53490869691 1143.53326490379 33.556 3 -1.2192980206326138 0.3732771301778805 1.0 ['ENSG00000188716|ENST00000338487|DUSP29'] 82670 6179 PQPPTAPT True PC9_epitope_Rep4 807.41266830591 807.41156993586 30.798 2 -1.2193177370295587 0.3732771301778805 1.0 ['CON__P04258', 'nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1'] 123433 9458 VGNIWVCY True NCI_RA007_Epitope_Rep5 952.4476739156398 952.44656993586 43.016 2 -1.2193506943194559 0.3732771301778805 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 37199 4857 GVQWPNLC True PC9_epitope_Rep5 915.4272728242299 915.42616993586 23.723 2 -1.2194309657875886 0.3732771301778805 1.0 ['ENST00000589829.5_1_18:11905221-11905871:-|nuORF'] 113776 5659 TMQNDRTTI True PC9_epitope_Rep4 1078.5077079729 1078.50660993586 28.569 2 -1.2194663478940002 0.3732771301778805 1.0 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 26877 13617 FLDGDHGPV True PC9_epitope_Rep1 955.43994568291 955.43884993586 57.233 2 -1.219473365557322 0.3732771301778805 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 48331 20917 IYSFAITLWQM True PC9_epitope_Rep3 1371.6896950861499 1371.6885899358601 85.734 2 -1.2194862914527498 0.3732771301778805 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 12852 10262 DLGVLYDWK True NCI_RA007_Epitope_Rep2 1107.5600608155898 1107.5589699358602 44.509 2 -1.219542266081972 0.3732771301778805 1.0 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A', 'ENST00000568515.1_1_15:66007788-66048788:-|nuORF'] 19196 6413 ELIEEFGQP True PC9_epitope_Rep2 1060.5076908895599 1060.5065899358601 30.077 2 -1.219558991131701 0.3732771301778805 1.0 ['ENST00000481600.5_1_10:127417653-127452038:+|nuORF', 'nc|ENSG00000107938|Q3B7T1-5|EDRF1', 'ENSG00000107938|ENST00000356792|EDRF1', 'EDRF1|p.Q1122R|1|0.3|ENSG00000107938|chr10:125752886-125752886|A/G|missense_variant', 'ENST00000419769.6_1_10:127430814-127452038:+|nuORF'] 52692 12527 KLWRPTVGER True H1975_Epitope_Rep1 1240.7040397106798 1240.70294993586 53.228 2 -1.2195654265157931 0.3732771301778805 1.0 ['ENSG00000153292|ENST00000371253|ADGRF1'] 136563 22083 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 92.071 2 -1.219567013373653 0.3732771301778805 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 116938 19616 TVFWKVLF True PC9_epitope_Rep1 1038.5902387450597 1038.5891499358602 80.28 2 -1.219603792564682 0.3732771301778805 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-4|SLC8A3', 'nc|ENSG00000100678|P57103-5|SLC8A3', 'SLC8A1|p.H824Tfs*8|1|0.29|ENSG00000183023|chr2:40139476-40139476|G/-|frameshift_variant', 'nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1', 'ENSG00000118160|ENST00000236877|SLC8A2'] 142450 8621 YYFKYLCKV True PC9_epitope_Rep4 1225.62055289717 1225.61944993586 40.643 2 -1.2196069503030338 0.3732771301778805 1.0 ['ENST00000424690.1_1_3:174952966-174953104:-|nuORF'] 113594 17833 TLVFSERPL True PC9_epitope_Rep1 1060.59169529704 1060.5905899358602 73.389 2 -1.2196248352595345 0.3732771301778805 1.0 ['ENSG00000214357|ENST00000369800|NEURL1B', 'nc|ENSG00000214357|A8MQ27-2|NEURL1B'] 37156 16992 GVQNITAA True NCI_RA007_Epitope_Rep4 772.40791727864 772.4073649679301 73.638 1 -1.219650236571185 0.3732771301778805 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 74575 7028 NGDPLNNTTPV True NCI_RA007_Epitope_Rep2 1140.5411162761602 1140.54000993586 31.96 2 -1.2196748914980902 0.3732771301778805 1.0 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'ENST00000584908.5_1_17:37856482-37868536:+|nuORF'] 62607 19728 LLLATALGP True PC9_epitope_Rep6 867.5429541994699 867.5424049679301 88.542 1 -1.2196759953399308 0.3732771301778805 1.0 ['ENSG00000099994|ENST00000358321|SUSD2'] 135315 10398 WFYYQYLLVTA True NCI_RA007_Epitope_Rep2 1465.72818876985 1465.72708993586 45.037 2 -1.21967808445224 0.3732771301778805 1.0 ['ENSG00000165389|ENST00000298130|SPTSSA'] 92473 11771 RLTKEKLDF True PC9_epitope_Rep4 1148.65535818276 1148.6537249037901 53.044 3 -1.2197952306294642 0.3732926241362687 1.0 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'ZNF638|p.G1305Vfs*22|1|0.14|ENSG00000075292|chr2:71423419-71423419|A/-|frameshift_variant', 'nc|ENSG00000075292|Q14966-2|ZNF638', 'nc|ENSG00000075292|Q14966-6|ZNF638', 'nc|ENSG00000075292|Q14966-4|ZNF638'] 130428 11166 VSMDILFLFPW True H1975_Epitope_Rep1 1366.6995314938597 1366.69842993586 47.918 2 -1.2198228000652043 0.3732926241362687 1.0 ['ENST00000368102.5_1_1:159804969-159805389:-|nuORF'] 57094 7639 LDSPKGGF True PC9_epitope_Rep3 819.41266830591 819.41156993586 34.382 2 -1.2199045406733395 0.37330037082818296 1.0 ['ITGB1|p.E249K|1|0.06|ENSG00000150093|chr10:32925912-32925912|C/T|missense_variant'] 22481 5862 ETFLQIRHG True H1975_Epitope_Rep3 1099.57744221523 1099.57687496793 27.563 1 -1.219920202041005 0.37331289860088 1.0 ['ENST00000381154.5_1_X:2838703-2839996:-|nuORF'] 136123 3086 WRPKDCKPRWK True NCI_RA007_Epitope_Rep1 1498.7979571788599 1498.79577987172 15.887 4 -1.2199253558246597 0.37331289860088 1.0 ['ENSG00000118276|ENST00000306851|B4GALT6', 'nc|ENSG00000118276|Q9UBX8-2|B4GALT6'] 14593 9933 DTYAGRPLPSK True NCI_RA007_Epitope_Rep1 1203.62478633047 1203.62368993586 42.641 2 -1.2199449800639526 0.37331289860088 1.0 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'SMCHD1-NDC80|5|fusion'] 98768 22130 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 91.47 3 -1.2199524262826242 0.37331289860088 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 36731 5509 GVKGAKIK True NCI_RA007_Epitope_Rep3 799.5279728416699 799.52686993586 28.671 2 -1.220008957208109 0.37331289860088 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 110064 6873 TELKGKGAE True NCI_RA007_Epitope_Rep5 931.4974605590298 931.49636993586 33.118 2 -1.2200117801689496 0.37331289860088 1.0 ['ENSG00000132518|ENST00000254854|GUCY2D'] 103816 17526 SPWRMSTLC True H1975_Epitope_Rep1 1079.48922145779 1079.48867496793 72.913 1 -1.2200290642566864 0.37331289860088 1.0 ['ENST00000381538.7_1_4:47877188-47877230:-|nuORF'] 84064 19007 PVYNSRLV True PC9_epitope_Rep4 946.5236157372199 946.52250993586 81.201 2 -1.2200341702776534 0.37331289860088 1.0 ['nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'ENST00000533620.5_1_11:120169092-120189098:+|nuORF'] 38170 22993 HDKRKKSRS True PC9_epitope_Rep3 1140.64758746372 1140.64594490379 93.71 3 -1.220118726673078 0.373345363309397 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 33863 22032 GLPPVEEGD True PC9_epitope_Rep1 911.4236269124299 911.42252993586 89.561 2 -1.2201729304552564 0.3733562388768044 1.0 ['nc|ENSG00000230561|P0DO97|CCDC192', 'ENSG00000230561|ENST00000514853|CCDC192', 'ENST00000513708.1_2_5:127271225-127277157:+|nuORF'] 131814 7401 VTQKSSGP True PC9_epitope_Rep3 802.4184819623399 802.41738993586 33.476 2 -1.2202106012897675 0.3733562388768044 1.0 ['CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF'] 79733 13561 PDYIKDYLP True H1975_Epitope_Rep3 1122.55972646242 1122.5586299358602 57.445 2 -1.2202323526978665 0.3733562388768044 1.0 ['ENSG00000164123|ENST00000434826|C4orf45'] 104878 13210 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 57.492 2 -1.220366444096145 0.37336398353787403 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 132796 25275 VVKIGLGVL True NCI_RA007_Epitope_Rep1 896.6058888091999 896.60534496793 104.58 1 -1.2204297471025918 0.3733964456089181 1.0 ['ENSG00000167355|ENST00000300773|OR51B5', 'OR51B5|p.T137S|1|0.27|ENSG00000167355|chr11:5343116-5343116|T/A|missense_variant'] 119495 10339 VARSKDIE True PC9_epitope_Rep3 916.4977949121999 916.49668993586 44.713 2 -1.220459807777882 0.3734041895816598 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3', 'ENST00000508449.1_1_10:61842291-61844452:-|nuORF'] 33636 15193 GLGLALRESL True PC9_epitope_Rep5 1027.60259433391 1027.6014899358602 63.446 2 -1.22051303289016 0.37341967695292705 1.0 ['ENST00000380237.5_1_11:5289584-5289665:-|nuORF'] 113782 24942 TMRPYIQEQ True PC9_epitope_Rep1 1164.5597435457598 1164.55810490379 100.85 3 -1.2205195077995745 0.37341967695292705 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 32312 18012 GFDQYRALL True PC9_epitope_Rep4 1081.55564414149 1081.5545499358602 77.342 2 -1.2205486749683057 0.373422805521571 1.0 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000480539.1_1_3:183911123-183911483:+|nuORF', 'ENST00000468892.5_1_3:183910449-183911483:+|nuORF'] 131539 9808 VTKYRDWIASK True H1975_Epitope_Rep1 1365.74048478905 1365.7393899358601 42.654 2 -1.220552173236312 0.373422805521571 1.0 ['ENSG00000198092|ENST00000356291|TMPRSS11F'] 98318 7075 SEVTHYKSSK True PC9_epitope_Rep2 1164.57750178488 1164.57640993586 32.61 2 -1.2206187199276208 0.37343829166718157 1.0 ['ZBTB8A|p.L297*|1|0.52|ENSG00000160062|chr1:32595118-32595118|C/-|frameshift_variant', 'nc|ENSG00000160062|Q96BR9-2|ZBTB8A', 'ENSG00000160062|ENST00000373510|ZBTB8A'] 8816 19996 AVDWVMMQ True PC9_epitope_Rep4 978.43030959934 978.42920993586 85.047 2 -1.2206345352621206 0.37343829166718157 1.0 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1', 'ENSG00000181788|ENST00000312960|SIAH2', 'SIAH2|p.G214V|1|0.32|ENSG00000181788|chr3:150742475-150742475|C/A|missense_variant'] 113421 6412 TLSGTIAI True NCI_RA007_Epitope_Rep1 774.44871946146 774.44762993586 28.966 2 -1.2206394099626816 0.37344603445293 1.0 ['nc|ENSG00000143493|Q9NVH2-3|INTS7', 'nc|ENSG00000143493|Q9NVH2-2|INTS7', 'ENSG00000143493|ENST00000366994|INTS7', 'nc|ENSG00000143493|Q9NVH2-4|INTS7'] 45100 19844 IPLIERLQRN True H1975_Epitope_Rep3 1250.7459045226599 1250.74426490379 83.083 3 -1.2207505226490434 0.3734491621768573 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 110798 9474 TGKEFALK True NCI_RA007_Epitope_Rep4 892.5018176634799 892.50072993586 43.298 2 -1.2207577181820142 0.3734491621768573 1.0 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 72319 14810 MIKEFRATL True PC9_epitope_Rep4 1107.61105084263 1107.6099499358602 64.905 2 -1.2208245412675134 0.3734646467142822 1.0 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 121422 16849 VEVVGGAL True H1975_Epitope_Rep3 742.4225047136199 742.4219549679301 70.361 1 -1.2208247992110954 0.3734646467142822 1.0 ['ENST00000471361.1_1_1:2441894-2444451:-|nuORF'] 53173 6077 KQDGIGVK True NCI_RA007_Epitope_Rep2 843.4814165720699 843.48030993586 28.244 2 -1.2210266818954805 0.37347238869598526 1.0 ['GATAD2B|p.S70I|1|0.05|ENSG00000143614|chr1:153828139-153828139|C/A|missense_variant'] 101869 7145 SLPLLDFPD True PC9_epitope_Rep1 1015.52261267771 1015.52150993586 32.294 2 -1.221184076639284 0.3735234517866851 1.0 ['ENST00000308527.5_1_15:75940532-75940874:+|nuORF'] 2241 7438 AENIGYDP True H1975_Epitope_Rep2 877.38176210045 877.3806699358599 33.556 2 -1.2212048102367856 0.3735234517866851 1.0 ['nc|ENSG00000096070|Q9ULD4-3|BRPF3', 'nc|ENSG00000096070|Q9ULD4-2|BRPF3', 'ENSG00000096070|ENST00000357641|BRPF3'] 7729 14304 ASPCNQHSPYW True PC9_epitope_Rep5 1288.52950604664 1288.52840993586 60.023 2 -1.221210821165785 0.3735234517866851 1.0 ['ENSG00000147168|ENST00000374202|IL2RG', 'nc|ENSG00000147168|P31785-2|IL2RG'] 94702 11920 RSCWSSMCHEE True H1975_Epitope_Rep2 1353.49002638677 1353.4889299358601 50.93 2 -1.2212109874538115 0.3735234517866851 1.0 ['ENST00000233099.5_1_2:37286102-37287764:-|nuORF'] 136470 23651 WVLIMELI True PC9_epitope_Rep4 1015.57762545603 1015.57652993586 99.317 2 -1.2212163518981571 0.3735234517866851 1.0 ['APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 113232 7106 TLQQFNIK True NCI_RA007_Epitope_Rep2 990.5498304850598 990.54872993586 32.261 2 -1.221319925821859 0.3735435483671679 1.0 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 126629 8650 VLNESGRIY True H1975_Epitope_Rep1 1049.5505587610498 1049.54946993586 38.201 2 -1.2213404222074822 0.3735512887043764 1.0 ['TGM1|p.A789Sfs*14|1|0.34|ENSG00000092295|chr14:24249403-24249404|-/G|frameshift_variant', 'ENSG00000092295|ENST00000206765|TGM1'] 72106 17675 MFKLILPV True H1975_Epitope_Rep1 959.5877962169099 959.58668993586 73.568 2 -1.221492868702597 0.3735745085683927 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 64735 7603 LPWRQNSWKGY True PC9_epitope_Rep5 1433.7204180508097 1433.71876490379 34.194 3 -1.2215459252780891 0.3735745085683927 1.0 ['nc|ENSG00000175175|Q8WY54-3|PPM1E', 'ENSG00000175175|ENST00000308249|PPM1E'] 68096 10703 LTDNIQDEFF True H1975_Epitope_Rep2 1240.5611830144 1240.56008993586 46.193 2 -1.221558005391085 0.3735745085683927 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 68736 5241 LTLAFASQLK True H1975_Epitope_Rep1 1090.6386454894598 1090.63754993586 25.223 2 -1.2216065593102736 0.37357763253808424 1.0 ['ENSG00000138375|ENST00000357276|SMARCAL1'] 22602 14818 ETLLVQYQ True PC9_epitope_Rep3 992.51786165044 992.51676993586 62.134 2 -1.221627183523987 0.37357763253808424 1.0 ['ENSG00000136813|ENST00000684092|ECPAS', 'nc|ENSG00000136813|Q5VYK3|ECPAS'] 72111 17456 MFKLILPV True NCI_RA007_Epitope_Rep5 959.5877962169099 959.58668993586 73.93 2 -1.2216609797285694 0.3735807563533932 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 72109 17108 MFKLILPV True NCI_RA007_Epitope_Rep4 959.5877962169099 959.58668993586 74.12 2 -1.2216841839181825 0.3735807563533932 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 65925 6711 LSDRLGSPV True H1975_Epitope_Rep2 942.5134449763399 942.51234993586 30.726 2 -1.2216968338807372 0.3735884954658892 1.0 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.S1928Lfs*58|1|0.21|ENSG00000171467|chr6:43338204-43338216|TTCTAGAAGCTGA/-|frameshift_variant', 'ZNF318|p.I1646Lfs*8|1|0.7|ENSG00000171467|chr6:43339063-43339063|G/-|frameshift_variant', 'ZNF318|p.Y1061Lfs*2|1|0.21|ENSG00000171467|chr6:43342770-43342771|-/A|frameshift_variant', 'nc|ENSG00000171467|Q5VUA4-2|ZNF318'] 76078 1141 NMGVHKAL True NCI_RA007_Epitope_Rep1 868.45890730568 868.45780993586 6.0292 2 -1.2217694090561804 0.37359623438716133 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000456826.2_1_1:149262279-149263299:+|nuORF', 'FAM91A1|p.R631L|1|0.4|ENSG00000176853|chr8:123806089-123806089|G/T|missense_variant'] 45905 11440 ISEADRQLL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 49.324 2 -1.2219169710062505 0.37361632733741845 1.0 ['TNKS2|p.N489I|1|0.12|ENSG00000107854|chr10:91836937-91836937|A/T|missense_variant'] 28237 19191 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 78.796 2 -1.2219785168662496 0.3736441578336175 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 13609 8299 DPHLNRWLRL True PC9_epitope_Rep3 1318.72583778442 1318.72420490379 36.895 3 -1.2220187332615744 0.3736441578336175 1.0 ['ENSG00000167487|ENST00000300976|KLHL26'] 57560 9297 LEDSAEEKVEE True NCI_RA007_Epitope_Rep2 1276.56705624048 1276.56594993586 40.771 2 -1.2220258862493836 0.3736518956848308 1.0 ['ENSG00000168497|ENST00000304141|CAVIN2'] 28720 5881 FSRSGGGK True NCI_RA007_Epitope_Rep4 794.4035006045399 794.40240993586 29.245 2 -1.2220369113968386 0.3736550173566072 1.0 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENST00000414390.5_1_2:85823769-85823939:+|nuORF'] 119039 17225 VAFWWYRGSL True PC9_epitope_Rep3 1283.6451278522297 1283.64349490379 71.409 3 -1.2220687631574088 0.3736550173566072 1.0 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF'] 58393 11895 LENPLQFFQ True NCI_RA007_Epitope_Rep3 1134.57095985246 1134.5698699358602 53.921 2 -1.2221977862394886 0.37367523901282146 1.0 ['PCDHB2|p.A658Pfs*84|1|0.14|ENSG00000112852|chr5:141096760-141096760|C/-|frameshift_variant', 'ENSG00000112852|ENST00000194155|PCDHB2', 'PCDHB6|p.A448Pfs*92|1|0.3|ENSG00000113211|chr5:141151594-141151594|C/-|frameshift_variant', 'ENSG00000113211|ENST00000231136|PCDHB6'] 25509 17960 FEGLESLVKL True PC9_epitope_Rep6 1133.63322575585 1133.6321299358601 81.711 2 -1.2222313182860138 0.37367523901282146 1.0 ['TRIL|p.T434Nfs*192|1|0.12|ENSG00000255690|chr7:28956746-28956747|-/T|frameshift_variant', 'ENSG00000255690|ENST00000539664|TRIL'] 116426 15051 TTKNWLGYTRK True PC9_epitope_Rep1 1366.7357337617798 1366.73407490379 62.711 3 -1.2222961077117065 0.37367523901282146 1.0 ['VIPAS39|p.K400R|1|0.14|ENSG00000151445|chr14:77429748-77429748|T/C|missense_variant'] 18285 9355 EIRLDTFFDP True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 40.892 2 -1.2223019996162057 0.37367523901282146 1.0 ['nc|ENSG00000078725|O60477-3|BRINP1', 'ENSG00000078725|ENST00000265922|BRINP1'] 27592 10669 FNNSEYHL True PC9_epitope_Rep3 1022.4457593393402 1022.4446699358599 45.984 2 -1.222309096073393 0.37367523901282146 1.0 ['ENSG00000090402|ENST00000264382|SI'] 128965 16704 VQISDKITISK True PC9_epitope_Rep3 1230.71835236214 1230.71724993586 69.384 2 -1.2223369224941203 0.37367523901282146 1.0 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB', 'ENST00000538021.5_2_11:72004413-72018253:-|nuORF'] 63758 7174 LNEKLDRED True PC9_epitope_Rep3 1130.5567663402999 1130.5556699358601 32.606 2 -1.2223440132785273 0.37367523901282146 1.0 ['ENSG00000120322|ENST00000239444|PCDHB8', 'PCDHB2|p.E96D|1|0.27|ENSG00000112852|chr5:141095078-141095078|G/T|missense_variant', 'PCDHB8|p.P241Lfs*18|1|0.27|ENSG00000120322|chr5:141178753-141178753|C/-|frameshift_variant', 'ENSG00000187372|ENST00000341948|PCDHB13'] 17184 11378 EGSLVLGL True H1975_Epitope_Rep1 786.44871946146 786.4481749679301 48.744 1 -1.2223495020794837 0.37367523901282146 1.0 ['PACS1|p.A229S|1|0.21|ENSG00000175115|chr11:66216143-66216143|G/T|missense_variant'] 88066 20599 QRRAGNPEP True PC9_epitope_Rep6 1023.5209899682698 1023.5198899358601 91.963 2 -1.2223819814587218 0.37367523901282146 1.0 ['ENST00000552885.2_1_12:80328793-80329330:+|nuORF'] 99707 9413 SIHLQRWDKYS True NCI_RA007_Epitope_Rep1 1431.7258973540702 1431.72480993586 40.608 2 -1.22247304706362 0.3736953272644178 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 87101 20576 QNRRAKLKRDV True NCI_RA007_Epitope_Rep5 1382.82186342758 1382.82022490379 86.086 3 -1.222530540278042 0.3737030632411067 1.0 ['ENST00000550249.2_1_2:74725056-74728711:-|nuORF', 'nc|ENSG00000179528|Q6XYB7-2|LBX2', 'ENSG00000179528|ENST00000377566|LBX2'] 100034 6702 SIQSQEPKTTS True PC9_epitope_Rep3 1204.59354577184 1204.59244993586 30.802 2 -1.2225581009313538 0.37372315065278344 1.0 ['ENSG00000021488|ENST00000023064|SLC7A9', 'SLC7A9|p.I127Hfs*82|1|0.11|ENSG00000021488|chr19:32864196-32864197|-/C|frameshift_variant'] 40113 18852 HPYGHRKFI True PC9_epitope_Rep4 1153.61449643029 1153.6133899358601 80.6 2 -1.22258183703097 0.3737555890417727 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 21037 8197 EQTDRYEFKVN True NCI_RA007_Epitope_Rep2 1427.66810769443 1427.66700993586 36.52 2 -1.2226408008325298 0.3737664422898783 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 101436 17716 SLKRWTWR True H1975_Epitope_Rep1 1131.63014649443 1131.6290499358602 73.736 2 -1.2226695468333895 0.3737664422898783 1.0 ['ENST00000437348.5_1_11:31115730-31149186:-|nuORF'] 3618 16325 AGPELQLLS True PC9_epitope_Rep3 926.5072969667399 926.50618993586 67.93 2 -1.222684344046694 0.3737664422898783 1.0 ['nc|ENSG00000177614|Q8N414-2|PGBD5'] 62879 25344 LLNGKKRRRWI True PC9_epitope_Rep5 1438.8997198254597 1438.89862993586 102.69 2 -1.2227036074951796 0.3737741768149594 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 36581 11356 GVHMWPEVC True PC9_epitope_Rep5 1056.4521076730798 1056.4510099358602 48.677 2 -1.2228128587695202 0.3737850288381973 1.0 ['ENST00000362021.8_1_11:47437008-47437206:+|nuORF'] 77869 9428 NVGAGSYL True PC9_epitope_Rep6 779.3813681776301 779.3808149679301 46.49 1 -1.222871285302251 0.3737850288381973 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1', 'nc|ENSG00000138688|Q2LD37-5|BLTP1', 'ENST00000495260.5_1_4:123117925-123131067:+|nuORF'] 30413 8679 GAENRELK True NCI_RA007_Epitope_Rep2 915.4773938207899 915.47628993586 38.405 2 -1.2228813607626012 0.3737850288381973 1.0 ['ENST00000509092.5_1_4:55124935-55146696:+|nuORF', 'nc|ENSG00000134853|P16234-3|PDGFRA', 'ENSG00000134853|ENST00000257290|PDGFRA'] 2331 6190 AEPQPGSPAAE True PC9_epitope_Rep3 1052.47745339044 1052.47634993586 28.85 2 -1.2230251570352968 0.37378976486860305 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 140389 7966 YREKEEEEQRR True PC9_epitope_Rep1 1550.74373224618 1550.74207490379 35.463 3 -1.2230381051183437 0.37378976486860305 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 58976 17767 LEVDFMVL True PC9_epitope_Rep1 964.49395540172 964.49284993586 73.138 2 -1.2231100125680612 0.37378976486860305 1.0 ['ENST00000260323.15_1_15:54435829-54528631:+|nuORF'] 103246 6259 SPLGYGGF True NCI_RA007_Epitope_Rep4 796.3755545211999 796.37444993586 30.679 2 -1.2231119654474758 0.37378976486860305 1.0 ['ENST00000392582.2_1_2:172930337-172937166:+|nuORF', 'ENSG00000172878|ENST00000315796|METAP1D'] 91341 7762 RGSRWWLRRYQ True NCI_RA007_Epitope_Rep2 1562.83309681762 1562.83198993586 34.819 2 -1.2231148657671629 0.37378976486860305 1.0 ['ENSG00000173237|ENST00000683896|C11orf86', 'nc|nan|A6NJI1|C11orf86'] 130407 12406 VSLQNILPV True PC9_epitope_Rep5 981.5858816406098 981.58478993586 52.718 2 -1.223120791035309 0.37378976486860305 1.0 ['COBL|p.P176S|1|0.38|ENSG00000106078|chr7:51191009-51191009|G/A|missense_variant'] 12368 5499 DISAYYISTFN True NCI_RA007_Epitope_Rep1 1292.5924831426798 1292.5913899358602 25.461 2 -1.223134375724651 0.37378976486860305 1.0 ['ENST00000418047.5_3_22:30681611-30682125:-|nuORF', 'ENST00000434987.5_3_22:30681611-30689737:-|nuORF', 'ENST00000447976.1_3_22:30681611-30689721:-|nuORF', 'ENST00000330168.9_3_22:30681611-30688778:-|nuORF', 'ENSG00000239282|ENST00000407689|CASTOR1'] 94246 6488 RRQMELLHLVE True NCI_RA007_Epitope_Rep2 1422.77655302794 1422.77491490379 29.846 3 -1.2231982135389117 0.3738175800834795 1.0 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000476142.1_1_3:56651192-56651654:+|nuORF'] 79984 9736 PEVTIGAHQT True PC9_epitope_Rep5 1051.52982331647 1051.5287299358602 42.42 2 -1.2232125485994918 0.3738175800834795 1.0 ['ENSG00000130414|ENST00000252711|NDUFA10', 'nc|ENSG00000130414|O95299-2|NDUFA10'] 55176 13816 LAARITNII True PC9_epitope_Rep2 983.61276509479 983.61166993586 58.426 2 -1.2232329077657067 0.37382531273540054 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 15988 15811 EDRKSKKK True H1975_Epitope_Rep2 1017.5930922793699 1017.5919899358599 66.005 2 -1.2232723613766054 0.3738330451963448 1.0 ['nc|nan|Q8NDD1-6|C1orf131', 'ENSG00000143633|ENST00000366649|C1orf131'] 66369 13540 LSGGSTMF True NCI_RA007_Epitope_Rep1 798.3581902049 798.35764496793 56.675 1 -1.2234015691219935 0.37385312604191107 1.0 ['ENSG00000115091|ENST00000263238|ACTR3', 'nc|ENSG00000133627|Q9P1U1-2|ACTR3B', 'ENSG00000133627|ENST00000256001|ACTR3B'] 32721 24290 GGWAGGNA True H1975_Epitope_Rep2 688.2928875263999 688.2923349679301 99.956 1 -1.2234369337435795 0.3738547403254884 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR'] 123167 11290 VGKVLQLL True NCI_RA007_Epitope_Rep5 868.5745886809199 868.57348993586 50.07 2 -1.2235048847810264 0.3738547403254884 1.0 ['ENST00000457622.1_1_6:46174144-46174312:+|nuORF'] 101482 16585 SLLDEESRF True PC9_epitope_Rep2 1094.52440358286 1094.5233099358602 69.031 2 -1.2235060409110476 0.3738547403254884 1.0 ['MYO3A|p.K1368Rfs*19|1|0.31|ENSG00000095777|chr10:26174366-26174366|A/-|frameshift_variant', 'MYO3A|p.N1110Kfs*11|1|0.19|ENSG00000095777|chr10:26170465-26170466|-/A|frameshift_variant', 'ENSG00000095777|ENST00000642920|MYO3A', 'ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B', 'MYO7B|p.K742Rfs*6|1|0.19|ENSG00000169994|chr2:127593620-127593620|G/-|frameshift_variant'] 98499 11255 SFLALATWLCL True PC9_epitope_Rep5 1236.65766668188 1236.65602490379 48.282 3 -1.223514403334273 0.3738547403254884 1.0 ['ENST00000374514.7_1_1:24121372-24121519:+|nuORF'] 87853 19848 QRGQGRGP True PC9_epitope_Rep6 854.4470967520198 854.44598993586 89.005 2 -1.223534762067437 0.3738547403254884 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 19469 16902 ELNPQWGE True PC9_epitope_Rep4 971.4348603024699 971.43376993586 72.998 2 -1.2237186757046865 0.3738980121002593 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 136190 23313 WRRRTQKRPV True PC9_epitope_Rep5 1381.81671847749 1381.8156299358602 94.653 2 -1.22383020537109 0.3738980121002593 1.0 ['nc|ENSG00000263639|P08118-2|MSMB'] 38374 12194 HEKNNLAD True PC9_epitope_Rep5 939.4410083120699 939.43990993586 51.895 2 -1.2238319257188461 0.3738980121002593 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 138416 7407 YHIALSGE True PC9_epitope_Rep4 888.43413202648 888.43302993586 35.838 2 -1.2238469975576192 0.3738980121002593 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 41776 10289 IAQIGVASVI True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 46.206 2 -1.2238627664833448 0.3739042398202336 1.0 ['ENSG00000197674|ENST00000641159|OR51C1P'] 130260 7877 VSGGDDYKIK True NCI_RA007_Epitope_Rep1 1080.54513902744 1080.5440499358601 34.633 2 -1.2239045543548583 0.3739042398202336 1.0 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF', 'ENST00000545266.1_1_1:160309677-160309767:-|nuORF'] 16954 14632 EFSQRFGVL True PC9_epitope_Rep5 1081.55564414149 1081.5545499358602 61.283 2 -1.2239300311371897 0.3739042398202336 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B', 'MYO7B|p.K742Rfs*6|1|0.19|ENSG00000169994|chr2:127593620-127593620|G/-|frameshift_variant'] 69323 22800 LTVFWMDFV True PC9_epitope_Rep3 1156.56270366788 1156.5616099358601 92.971 2 -1.2239350270587548 0.3739042398202336 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 19582 14004 ELQIAKDKNYG True PC9_epitope_Rep1 1277.6615657620098 1277.6604699358602 58.704 2 -1.2240436769119993 0.3739058506895147 1.0 ['ZP4|p.V509Wfs*8|1|0.26|ENSG00000116996|chr1:237882520-237882520|C/-|frameshift_variant', 'ENSG00000116996|ENST00000366570|ZP4'] 69980 15999 LVLPVHRLLAA True PC9_epitope_Rep4 1200.77066271852 1200.76956993586 69.472 2 -1.2240497086439512 0.3739058506895147 1.0 ['ENST00000381095.7_2_X:6146731-6146848:-|nuORF'] 45770 11819 ISALWEAKA True PC9_epitope_Rep2 987.5389314481899 987.53782993586 50.791 2 -1.2240908744688783 0.3739058506895147 1.0 ['ENST00000469061.1_1_9:39139924-39140549:-|nuORF', 'SVA_D_dup1229|chr17:30522805-30524227:+|1.2483296746688612|0.476847412502663|1.39|540.0|65|3|anti-sense'] 68763 11503 LTLETEDMLP True PC9_epitope_Rep1 1160.56349151352 1160.56183490379 49.125 3 -1.2240908786264542 0.3739058506895147 1.0 ['ENSG00000166069|ENST00000319669|TMCO5A'] 4707 13829 ALCALGDSRIF True PC9_epitope_Rep5 1164.59612905448 1164.59449490379 58.213 3 -1.2240916509117283 0.3739058506895147 1.0 ['ENST00000530342.2_1_11:67007661-67007709:+|nuORF'] 19053 12760 ELFLWKSIK True NCI_RA007_Epitope_Rep1 1162.6750309981799 1162.67338490379 53.619 3 -1.2242697119528607 0.37395834619325685 1.0 ['ENST00000503787.5_1_5:54456180-54456831:+|nuORF'] 130740 9747 VSVYTNLIVR True NCI_RA007_Epitope_Rep2 1162.6710082468999 1162.66990993586 42.534 2 -1.2242830574640584 0.37395834619325685 1.0 ['ENSG00000117971|ENST00000261751|CHRNB4', 'CHRNB4|p.S218Kfs*224|1|0.08|ENSG00000117971|chr15:78629652-78629653|-/T|frameshift_variant'] 13117 20783 DLQSLGRD True NCI_RA007_Epitope_Rep1 902.4457593393399 902.44521496793 85.074 1 -1.224383033384492 0.37398464311285584 1.0 ['ENSG00000168065|ENST00000301891|SLC22A11'] 38731 12707 HGGIATIF True PC9_epitope_Rep5 814.4337381036601 814.43264993586 53.883 2 -1.2244303593795591 0.37398464311285584 1.0 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-2|GGCT', 'nc|ENSG00000006625|O75223-4|GGCT'] 135196 9047 WERSKPSAP True PC9_epitope_Rep2 1056.5352430500798 1056.5341499358601 40.147 2 -1.2244464690014039 0.37398464311285584 1.0 ['ENST00000456414.2_1_1:117036239-117036707:-|nuORF'] 58923 11404 LETKVVPETPK True H1975_Epitope_Rep3 1239.70745332527 1239.70634993586 48.981 2 -1.2244533734056444 0.37398464311285584 1.0 ['nc|ENSG00000165566|Q8N7J2-2|AMER2', 'AMER2|p.D553Tfs*32|1|0.38|ENSG00000165566|chr13:25169963-25169963|C/-|frameshift_variant', 'ENSG00000165566|ENST00000515384|AMER2'] 67289 7432 LSRTLLGSH True NCI_RA007_Epitope_Rep2 982.5559784946599 982.55488993586 33.535 2 -1.2244714765557148 0.37398464311285584 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 116710 15481 TVDFGTGS True NCI_RA007_Epitope_Rep3 782.34464831574 782.34409496793 68.454 1 -1.2244972817788724 0.37400782629090595 1.0 ['nc|ENSG00000170266|P16278-3|GLB1', 'nc|ENSG00000170266|P16278|GLB1', 'ENSG00000170266|ENST00000307363|GLB1'] 67789 12532 LSYVRVSV True PC9_epitope_Rep2 921.5283667644899 921.52726993586 53.511 2 -1.2245795234626369 0.37400782629090595 1.0 ['ENSG00000119973|ENST00000239032|PRLHR', 'PRLHR|p.F333Sfs*25|1|0.09|ENSG00000119973|chr10:118594249-118594249|G/-|frameshift_variant'] 102114 16675 SLRLKFNL True PC9_epitope_Rep5 989.60220041109 989.60110993586 69.144 2 -1.2245894845637564 0.37400782629090595 1.0 ['ENSG00000198826|ENST00000361627|ARHGAP11A', 'nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A', 'nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A'] 102198 5644 SLRYPWMVPWP True NCI_RA007_Epitope_Rep3 1430.7169128935 1430.71525490379 29.19 3 -1.2248301130147201 0.37408198279373467 1.0 ['ENST00000296530.12_1_4:159092151-159092343:-|nuORF'] 9232 10325 AVNVKSVAEA True PC9_epitope_Rep4 986.5396597241798 986.53856993586 47.405 2 -1.2248534679488905 0.37408198279373467 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 32723 23209 GGWAGGNA True NCI_RA007_Epitope_Rep4 688.2928875263999 688.2923349679301 100.74 1 -1.224873053054323 0.37408198279373467 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR'] 70030 21392 LVMQQQHQ True PC9_epitope_Rep4 1010.4967493663801 1010.49564993586 90.453 2 -1.2249130391630882 0.37408198279373467 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 99000 24688 SHDPCGCC True NCI_RA007_Epitope_Rep1 820.2302298938 820.22912993586 102.23 2 -1.22492732964739 0.37408198279373467 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18'] 74177 9128 NEEFWQYN True H1975_Epitope_Rep2 1128.4512386426 1128.44959490379 40.063 3 -1.2249354038161118 0.37408198279373467 1.0 ['ENSG00000135045|ENST00000376854|C9orf40'] 42156 5787 IDPGSTER True NCI_RA007_Epitope_Rep5 873.41921023833 873.41866496793 28.946 1 -1.224948957006356 0.37408198279373467 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'CACNA1H|p.T2226Sfs*36|1|0.19|ENSG00000196557|chr16:1220609-1220609|C/-|frameshift_variant', 'ENSG00000196557|ENST00000348261|CACNA1H'] 119260 24011 VALKPLGGL True NCI_RA007_Epitope_Rep3 866.5589386167799 866.55784993586 104.01 2 -1.2249618354062508 0.37408198279373467 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 119007 5794 VAEVEPQSQPQ True NCI_RA007_Epitope_Rep2 1210.5829810881398 1210.58188993586 27.155 2 -1.2249862434225054 0.3740881993557226 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 12498 19182 DKELLIDNEKV True H1975_Epitope_Rep3 1314.70309622082 1314.7019899358602 80.434 2 -1.225027615634376 0.3740881993557226 1.0 ['CON__P02672'] 66130 7297 LSELPDTGSEH True NCI_RA007_Epitope_Rep2 1183.53569654255 1183.5345899358601 33.004 2 -1.2250341830973397 0.3740881993557226 1.0 ['ENST00000281187.9_1_11:134115764-134115887:+|nuORF'] 114175 21486 TPKRRRLWR True PC9_epitope_Rep6 1267.7737910363498 1267.7721449037901 95.519 3 -1.2250753643646228 0.3740881993557226 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 131949 19007 VTRYSCPR True PC9_epitope_Rep6 980.4861846826799 980.48508993586 85.755 2 -1.2251467240519893 0.3741036495809832 1.0 ['ENST00000556296.1_1_14:20923648-20924010:+|nuORF', 'ENST00000557159.5_1_14:20923648-20923933:+|nuORF'] 46850 12547 ITKEKCKWY True NCI_RA007_Epitope_Rep2 1197.6216155263298 1197.6205099358601 53.419 2 -1.2251619570512258 0.3741036495809832 1.0 ['nc|ENSG00000168658|Q502W6-2|VWA3B', 'nc|ENSG00000168658|Q502W6-8|VWA3B', 'ENST00000409460.5_1_2:98703705-98907168:+|nuORF', 'ENSG00000168658|ENST00000477737|VWA3B', 'nc|ENSG00000168658|Q502W6-6|VWA3B', 'ENST00000422503.6_1_2:98732117-98833284:+|nuORF'] 22681 12485 ETQMHLLEC True PC9_epitope_Rep4 1102.47871634374 1102.47760993586 55.83 2 -1.2251648790447693 0.37411137440758296 1.0 ['GUCY2F|p.G1004Wfs*34|1|0.4|ENSG00000101890|chrX:109385229-109385230|-/A|frameshift_variant', 'GUCY2F|p.P942Qfs*17|1|0.17|ENSG00000101890|chrX:109388620-109388620|G/-|frameshift_variant', 'ENSG00000101890|ENST00000218006|GUCY2F', 'GUCY2F|p.H267D|1|0.16|ENSG00000101890|chrX:109465375-109465375|G/C|missense_variant'] 114872 10775 TQQSLHEPM[Oxidation]Y True H1975_Epitope_Rep1 1248.54448778488 1248.54397496793 46.409 1 -1.22526078028562 0.3741175889815866 1.0 ['ENSG00000280021|ENST00000624103|OR51F1'] 111855 7432 TIMRWFRR True H1975_Epitope_Rep1 1164.63385197588 1164.6327499358601 33.592 2 -1.225265720611685 0.3741175889815866 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45003626-45005995:-|nuORF'] 125307 15086 VINVESLVR True PC9_epitope_Rep2 1027.6025943339098 1027.6014899358602 63.285 2 -1.2252828416223367 0.3741175889815866 1.0 ['nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A', 'ENST00000467042.1_1_2:99182504-99185377:+|nuORF'] 23359 19743 EVRLRFLSYED True NCI_RA007_Epitope_Rep2 1425.7252286477299 1425.7241299358602 81.754 2 -1.2253134932391234 0.3741175889815866 1.0 ['ENSG00000159915|ENST00000683810|ZNF233'] 74619 23717 NGIPAVVWNI True PC9_epitope_Rep5 1081.59202965021 1081.59092993586 96.208 2 -1.2253916456088583 0.3741330371467358 1.0 ['ENST00000502459.5_1_4:89930209-89950779:-|nuORF', 'FAM13A|p.Q533Rfs*33|1|0.08|ENSG00000138640|chr4:88758883-88758883|G/-|frameshift_variant', 'ENSG00000138640|ENST00000264344|FAM13A'] 124166 12507 VGSTLLKEV True PC9_epitope_Rep2 944.55424715916 944.55314993586 53.417 2 -1.2253919365880714 0.3741330371467358 1.0 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4', 'ENST00000393966.1_1_16:67314567-67316137:+|nuORF'] 78806 4850 PAASPDTAAW True NCI_RA007_Epitope_Rep5 985.4505103666099 985.44940993586 25.348 2 -1.2254534556402386 0.37417316615658014 1.0 ['ENST00000587411.5_1_19:5925055-5932565:-|nuORF', 'ENST00000586344.5_1_19:5917623-5933521:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-3|RANBP3', 'ENST00000592771.5_1_19:5917623-5941693:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-2|RANBP3', 'ENSG00000031823|ENST00000340578|RANBP3'] 59060 15393 LEVWFSRQQPD True H1975_Epitope_Rep3 1403.6833638357498 1403.6822699358602 64.619 2 -1.225462223990389 0.37417316615658014 1.0 ['ENSG00000123505|ENST00000368885|AMD1'] 60340 7373 LGSLTASHR True PC9_epitope_Rep1 940.50902830224 940.50792993586 33.173 2 -1.2254913469583304 0.3741808892673355 1.0 ['ENST00000574938.5_1_17:79650618-79650651:-|nuORF'] 76101 996 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 5.4897 3 -1.2255154239923223 0.3741839945702474 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 37198 4706 GVQWPNLC True PC9_epitope_Rep1 915.4272728242299 915.42616993586 22.974 2 -1.2255807542053352 0.3741839945702474 1.0 ['ENST00000589829.5_1_18:11905221-11905871:-|nuORF'] 76126 1904 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 10.536 3 -1.2256560161730417 0.37419171726146405 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 78805 4848 PAASPDTAAW True NCI_RA007_Epitope_Rep4 985.4505103666099 985.44940993586 25.088 2 -1.225693579331828 0.374199439762084 1.0 ['ENST00000587411.5_1_19:5925055-5932565:-|nuORF', 'ENST00000586344.5_1_19:5917623-5933521:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-3|RANBP3', 'ENST00000592771.5_1_19:5917623-5941693:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-2|RANBP3', 'ENSG00000031823|ENST00000340578|RANBP3'] 83856 3815 PVMWLSVALL True NCI_RA007_Epitope_Rep4 1127.64128834175 1127.6396549037902 20.86 3 -1.2257151793854748 0.3742195019620425 1.0 ['ENSG00000178033|ENST00000368599|CALHM5'] 67679 11546 LSWEEDRQKV True NCI_RA007_Epitope_Rep2 1288.6411646706001 1288.64006993586 49.503 2 -1.2257431969876431 0.37422722392921925 1.0 ['nc|ENSG00000130783|Q6P9F0-2|CCDC62', 'ENSG00000130783|ENST00000253079|CCDC62', 'CCDC62|p.E276Nfs*10|1|0.07|ENSG00000130783|chr12:122797358-122797358|A/-|frameshift_variant'] 13305 15189 DLTQKREL True PC9_epitope_Rep3 1001.55055876105 1001.54946993586 63.57 2 -1.2258159998507119 0.3742951272781116 1.0 ['ENSG00000112561|ENST00000373033|TFEB', 'nc|ENSG00000112561|P19484-2|TFEB'] 58595 19640 LEQRHAGLRR True PC9_epitope_Rep4 1234.7006856657397 1234.69958993586 83.663 2 -1.2258243898042962 0.3742951272781116 1.0 ['ENSG00000125864|ENST00000377873|BFSP1'] 66999 12635 LSPLHPSQQLY True H1975_Epitope_Rep3 1281.6717365228901 1281.67062993586 53.805 2 -1.225828665862797 0.3742951272781116 1.0 ['nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC', 'ENST00000496608.1_1_1:41236053-41236497:+|nuORF'] 73518 17834 MVKKMKKR True NCI_RA007_Epitope_Rep4 1047.64091150227 1047.63980993586 77.219 2 -1.225830683556861 0.3742951272781116 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 113201 12488 TLQEQLRAL True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 53.344 2 -1.22589369982592 0.37430594970757347 1.0 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 84112 303 PWRVFLKLL True PC9_epitope_Rep3 1170.72773527738 1170.72607490379 1.7031 3 -1.2259273824713643 0.37430594970757347 1.0 ['ENST00000552957.5_1_14:29242013-29247346:+|nuORF'] 15992 18225 EDRQNQQF True PC9_epitope_Rep6 1063.4682856890697 1063.46718993586 82.745 2 -1.2259687904956538 0.37430594970757347 1.0 ['chr1:110668344-110671476|395|12.28|0.0|20.23|-|0|KCNA3,KCNA3|1'] 34459 23369 GPKKTKRE True PC9_epitope_Rep3 942.5610638750999 942.55996993586 95.169 2 -1.2260424767550895 0.3743260083655163 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 6206 9362 APPAQVRRSFR True NCI_RA007_Epitope_Rep2 1283.72108675715 1283.7199899358602 41.025 2 -1.2260798458795408 0.37433372816108973 1.0 ['ENST00000587856.1_1_17:43318935-43319418:+|nuORF'] 112090 6035 TIVELFFQE True H1975_Epitope_Rep3 1124.5753765265597 1124.57426993586 28.228 2 -1.2261373770972768 0.37436150524367673 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.Y1094Lfs*10|1|0.43|ENSG00000030066|chr11:47797787-47797788|-/A|frameshift_variant'] 23358 19094 EVRLRFLSYED True H1975_Epitope_Rep3 1425.7252286477299 1425.7241299358602 80.062 2 -1.2261401925147868 0.37436150524367673 1.0 ['ENSG00000159915|ENST00000683810|ZNF233'] 123696 5364 VGRAPKQA True PC9_epitope_Rep4 825.48208527841 825.48098993586 27.353 2 -1.226150715996613 0.3743800429343401 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 47297 16041 IVDQRAWNL True PC9_epitope_Rep1 1113.59309227937 1113.59198993586 66.516 2 -1.22621433794296 0.3743800429343401 1.0 ['nc|ENSG00000133943|Q7Z3D6-5|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6-4|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6-3|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6|DGLUCY', 'ENSG00000133943|ENST00000256324|DGLUCY'] 75360 19184 NISLEGKTNF True PC9_epitope_Rep3 1121.57168812845 1121.5705899358602 79.009 2 -1.2262335070270847 0.3743800429343401 1.0 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'nc|ENSG00000048392|Q7LG56-4|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2'] 96812 7802 SAQTHFAA True PC9_epitope_Rep4 831.3875161872298 831.38640993586 37.411 2 -1.2262534966392185 0.3743800429343401 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 27766 21873 FPVGLFILV True PC9_epitope_Rep4 1003.6106398364699 1003.60954993586 92.345 2 -1.2262715886906699 0.3744000986984147 1.0 ['ENSG00000197658|ENST00000612278|SLC22A24', 'nc|ENSG00000197658|Q8N4F4-3|SLC22A24'] 76105 1674 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 9.2034 3 -1.2263053822085201 0.3744155347471532 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 5840 7177 APFFLHLV True PC9_epitope_Rep2 942.5327238689398 942.53162993586 32.998 2 -1.2263152983140435 0.3744155347471532 1.0 ['ENSG00000124089|ENST00000243911|MC3R'] 70709 18939 LWQRQRLRLE True H1975_Epitope_Rep2 1396.80515073428 1396.8034949037901 78.617 3 -1.2263324208938164 0.37441863334114656 1.0 ['ENST00000521548.5_1_8:28340871-28347759:-|nuORF', 'ENST00000380254.6_1_8:28340871-28347825:-|nuORF'] 45892 7634 ISDVEQQFK True NCI_RA007_Epitope_Rep2 1092.54513902744 1092.5440499358601 34.319 2 -1.226390666619525 0.37441863334114656 1.0 ['MCM6|p.R166S|1|0.12|ENSG00000076003|chr2:135868728-135868728|C/G|missense_variant'] 96821 12770 SARREQKREQY True H1975_Epitope_Rep2 1449.74367267653 1449.74256993586 54.223 2 -1.2264747794507915 0.37442944906367964 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3', 'ENST00000570131.1_1_16:1812897-1813838:+|nuORF'] 44918 7869 INSAAAQM True PC9_epitope_Rep5 804.37998827864 804.37888993586 35.211 2 -1.226481197556653 0.37442944906367964 1.0 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1'] 81521 14626 PLHHRAAR True NCI_RA007_Epitope_Rep3 956.5416658432 956.54056993586 64.878 2 -1.226484249730463 0.37442944906367964 1.0 ['ENST00000308713.9_3_16:29910520-29910610:-|nuORF'] 44261 18410 ILADEARYSSM True NCI_RA007_Epitope_Rep1 1254.59143759686 1254.59034993586 75.746 2 -1.226652480611028 0.37444026398569047 1.0 ['ENST00000505295.1_1_5:80540896-80542784:-|nuORF'] 7523 10240 ASDQIRSAI True PC9_epitope_Rep3 959.5036085686299 959.50250993586 44.338 2 -1.2266663578674 0.37444026398569047 1.0 ['ENST00000514498.1_1_4:166327046-166327295:-|nuORF'] 128384 9623 VPRMRTREG True H1975_Epitope_Rep1 1100.58729570628 1100.5861899358601 41.942 2 -1.226669128253139 0.37444026398569047 1.0 ['ENST00000310823.7_1_2:9650136-9650184:-|nuORF'] 46058 15595 ISGNPVTLT True PC9_epitope_Rep5 900.4916469026001 900.49109496793 64.995 1 -1.2266999659952527 0.3744433616638089 1.0 ['FCRL5|p.H721Qfs*8|1|0.22|ENSG00000143297|chr1:157524355-157524356|-/T|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.G523Efs*9|1|0.09|ENSG00000143297|chr1:157534727-157534727|C/-|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-4|FCRL5', 'ENST00000481082.1_1_1:157512505-157514867:-|nuORF'] 13857 7028 DQPSQWPRK True NCI_RA007_Epitope_Rep2 1140.5676058075198 1140.56650993586 31.96 2 -1.2267274486139266 0.3744433616638089 1.0 ['ENST00000278460.11_1_11:47183282-47183486:+|nuORF'] 966 9028 ADTAGFLHSS True NCI_RA007_Epitope_Rep5 1004.45632402304 1004.45522993586 41.383 2 -1.22674115994754 0.37445107810726797 1.0 ['ENSG00000177169|ENST00000321867|ULK1'] 135464 15429 WIEQSVFRQWF True PC9_epitope_Rep1 1524.75138382592 1524.74917987172 64.166 4 -1.2267574127880634 0.37445879436035967 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 129741 19325 VRQLMHKLLVF True NCI_RA007_Epitope_Rep3 1382.82204666838 1382.8204049037902 84.368 3 -1.2268277460289003 0.37446651042309115 1.0 ['ENST00000482853.5_1_6:41001618-41002768:-|nuORF', 'UNC5CL|p.P410Qfs*33|1|0.24|ENSG00000124602|chr6:41030493-41030493|G/-|frameshift_variant', 'ENSG00000124602|ENST00000244565|UNC5CL'] 63768 18669 LNENKQERDKE True H1975_Epitope_Rep1 1401.68482038773 1401.6837299358601 77.858 2 -1.2268530873142343 0.37446965959546125 1.0 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 10415 3781 CHCRVWRPVF True H1975_Epitope_Rep1 1301.62738669645 1301.62573490379 19.122 3 -1.2268675328276115 0.37446965959546125 1.0 ['ENST00000526600.1_1_11:12961545-12961695:+|nuORF'] 55854 16298 LAPRCTLSRPC True PC9_epitope_Rep2 1215.62163260967 1215.61999490379 67.935 3 -1.2268765796542827 0.37446965959546125 1.0 ['nc|ENSG00000164972|Q8NCR6-2|SPMIP6'] 131118 12306 VTEEIKNP True H1975_Epitope_Rep2 928.48656152216 928.48546993586 52.42 2 -1.2268987161317773 0.37446965959546125 1.0 ['ENSG00000155465|ENST00000674313|SLC7A7', 'ENSG00000103064|ENST00000219343|SLC7A6'] 60683 10234 LHNDHPYCSP True PC9_epitope_Rep2 1181.49239226193 1181.49128993586 44.7 2 -1.2270273861203485 0.37446965959546125 1.0 ['ENST00000576921.1_1_16:3072866-3073436:-|nuORF', 'nc|ENSG00000103145|Q9NWW0-2|HCFC1R1', 'ENSG00000103145|ENST00000248089|HCFC1R1'] 64130 21323 LPEPLPPPPRP True PC9_epitope_Rep2 1208.6917436914798 1208.6906499358602 87.483 2 -1.2270306430764468 0.37446965959546125 1.0 ['ENST00000334062.7_1_13:114748460-114748754:-|nuORF'] 65958 10002 LSDVAYRDP True H1975_Epitope_Rep1 1034.50327421546 1034.5021699358601 43.409 2 -1.2270640179443721 0.37446965959546125 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 58785 4915 LESINSIK True NCI_RA007_Epitope_Rep2 902.50729696674 902.50618993586 23.738 2 -1.2270890045073437 0.37446965959546125 1.0 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 113271 16800 TLRHEILELII True PC9_epitope_Rep1 1348.8078360728798 1348.8067299358602 69.445 2 -1.2270926692097386 0.37446965959546125 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000103472|A6NIE6|RRN3P2', 'ENST00000564580.5_1_16:29086353-29108616:+|nuORF', 'ENST00000561685.1_1_16:15168568-15177423:-|nuORF', 'nc|ENSG00000085721|Q9NYV6-2|RRN3'] 25858 5901 FFGCFTEKHI True PC9_epitope_Rep1 1227.57466533391 1227.57301490379 27.514 3 -1.2271562594900676 0.37446965959546125 1.0 ['ENSG00000247746|ENST00000500968|USP51'] 138971 7675 YKLYLVRPE True NCI_RA007_Epitope_Rep4 1179.6651945904698 1179.66355490379 36.183 3 -1.2271661234090854 0.3744773744773745 1.0 ['ENSG00000090776|ENST00000204961|EFNB1'] 98591 17622 SFSFLIWWHWY True H1975_Epitope_Rep1 1570.73975651306 1570.7386499358602 73.324 2 -1.227271417968133 0.37449128086229433 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 5362 21350 ALSEDLRTMR True NCI_RA007_Epitope_Rep4 1190.60775636734 1190.60717496793 92.549 1 -1.2272944467843878 0.37449128086229433 1.0 ['ENSG00000179046|ENST00000682553|TRIML2'] 77487 8923 NTCCFCWCCC True NCI_RA007_Epitope_Rep3 1184.3040061643599 1184.30290993586 42.18 2 -1.2273120896796923 0.37449128086229433 1.0 ['ENSG00000091844|ENST00000206262|RGS17'] 66128 7365 LSELKRSEL True PC9_epitope_Rep4 1073.60807363717 1073.6069699358602 35.665 2 -1.227346502507693 0.37449128086229433 1.0 ['nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2'] 123690 5279 VGRAPKQA True PC9_epitope_Rep1 825.48208527841 825.48098993586 25.149 2 -1.2273604159001756 0.37449128086229433 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 80418 19437 PGKKITSRA True H1975_Epitope_Rep2 956.5767139392399 956.57560993586 80.672 2 -1.227433578252792 0.37450980392156863 1.0 ['nc|ENSG00000164463|Q8IUR6-2|CREBRF', 'ENST00000520464.1_1_5:172507634-172535847:+|nuORF', 'ENSG00000164463|ENST00000296953|CREBRF', 'nc|ENSG00000164463|Q8IUR6-3|CREBRF'] 81436 20380 PLEVSVPAP True PC9_epitope_Rep6 907.5014833103098 907.5009349679301 91.091 1 -1.2274402919493932 0.37450980392156863 1.0 ['ENST00000606285.1_1_6:710944-711145:-|nuORF'] 61869 14924 LLCPPKRQL True PC9_epitope_Rep6 1066.63212064038 1066.6310299358602 69.403 2 -1.2274562260568684 0.37450980392156863 1.0 ['ENST00000420509.1_1_2:206950883-206951051:+|nuORF'] 56514 16622 LDFPFSFRP True PC9_epitope_Rep3 1124.5654805492 1124.5643899358602 69.073 2 -1.2274812578007104 0.37450980392156863 1.0 ['ENST00000368408.3_1_1:155059573-155059840:+|nuORF'] 44050 15675 IIKKTESDAAL True H1975_Epitope_Rep3 1187.6761531969898 1187.6750499358602 65.714 2 -1.2274863515483079 0.3745175173570433 1.0 ['ENSG00000186951|ENST00000407236|PPARA'] 13025 7353 DLNHKTQENYR True NCI_RA007_Epitope_Rep2 1416.6745900572 1416.67348993586 33.224 2 -1.227534003683824 0.3745252306022789 1.0 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 58046 8652 LEIHFFPL True H1975_Epitope_Rep2 1014.5538532363399 1014.55274993586 38.239 2 -1.2275780039084463 0.37454527517788216 1.0 ['ENST00000468823.1_1_X:100653763-100655794:-|nuORF'] 19005 13713 ELERRREAFTN True NCI_RA007_Epitope_Rep2 1419.7218746027897 1419.72076993586 57.985 2 -1.2276604032465668 0.3745776506276667 1.0 ['ENSG00000110756|ENST00000349215|HPS5', 'nc|ENSG00000110756|Q9UPZ3-2|HPS5', 'ENST00000352460.7_1_11:18303495-18317646:-|nuORF'] 87851 21728 QRGQGRGP True PC9_epitope_Rep2 854.4470967520198 854.44598993586 89.053 2 -1.2276797043938235 0.3746100252789938 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 123698 4892 VGRAPKQA True PC9_epitope_Rep6 825.48208527841 825.48098993586 26.36 2 -1.2277182704917793 0.3746177370030581 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 118707 9930 TYTFSLEGSG True PC9_epitope_Rep1 1060.47130538084 1060.47020993586 43.058 2 -1.227755411611 0.37463934304949326 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2', 'RIN2|p.P358Tfs*9|1|0.44|ENSG00000132669|chr20:19974942-19974943|-/A|frameshift_variant'] 36984 16287 GVNFRWMRR True NCI_RA007_Epitope_Rep3 1220.63491460504 1220.6338099358602 71.765 2 -1.2278255946461023 0.37463934304949326 1.0 ['ENST00000301633.8_1_17:76220242-76220407:+|nuORF'] 21872 17409 ESDFQLLEIAR True H1975_Epitope_Rep1 1319.67213044571 1319.6710299358601 72.44 2 -1.227832345295762 0.37463934304949326 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1'] 20295 8199 ENTGHWER True NCI_RA007_Epitope_Rep5 1027.4471563216698 1027.4460499358602 38.217 2 -1.2278634244658038 0.37463934304949326 1.0 ['nc|ENSG00000196166|Q6ZUL3|LINC03042'] 132747 5029 VVILVVIAL True NCI_RA007_Epitope_Rep1 937.6575900288899 937.65704496793 23.646 1 -1.2278708487359076 0.37463934304949326 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 82831 24326 PRSRHRRT True H1975_Epitope_Rep3 1064.60639135808 1064.6052899358601 101.3 2 -1.2278713906430965 0.37463934304949326 1.0 ['ENST00000529477.5_1_1:32385166-32403656:-|nuORF'] 79929 12766 PERLVPVSPL True PC9_epitope_Rep6 1105.64954452633 1105.64844993586 60.599 2 -1.228028901587938 0.37470870374708704 1.0 ['ENSG00000124217|ENST00000244051|MOCS3'] 135615 23863 WLKKILLLL True NCI_RA007_Epitope_Rep5 1138.7841875243398 1138.78308993586 99.158 2 -1.2281476630802939 0.3747534030380746 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 60845 15505 LHVKTKMV True PC9_epitope_Rep5 954.56845775466 954.56736993586 64.649 2 -1.2282761509142717 0.37478115059305106 1.0 ['ENST00000509440.5_1_3:129579804-129599355:-|nuORF'] 43638 5696 IGYPNFIMDPK True NCI_RA007_Epitope_Rep2 1293.64274489373 1293.64108490379 26.771 3 -1.22831181863747 0.37478115059305106 1.0 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ECE1|p.Y620Pfs*67|1|0.2|ENSG00000117298|chr1:21225417-21225433|TCCCGTCCTTGTCATAC/-|frameshift_variant', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 83996 9482 PVSRRLFLY True PC9_epitope_Rep5 1149.66586329681 1149.66421490379 41.428 3 -1.2283454356259478 0.37479503396579994 1.0 ['CLIC2|p.D175Y|1|0.1|ENSG00000155962|chrX:155279208-155279208|C/A|missense_variant'] 56359 14883 LDDLLQRLHHN True NCI_RA007_Epitope_Rep1 1372.7211463268 1372.72004993586 61.95 2 -1.228391469149367 0.37479503396579994 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 74540 6663 NFRPTFSLFSW True NCI_RA007_Epitope_Rep2 1400.6877209402 1400.68606490379 30.529 3 -1.2284590698414375 0.37479503396579994 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9'] 128331 5294 VPPVANGH True NCI_RA007_Epitope_Rep3 789.4133370122499 789.41222993586 27.833 2 -1.2284655645526783 0.37479503396579994 1.0 ['ENST00000467144.5_1_6:3298407-3324352:-|nuORF'] 27136 7284 FLIWWHWYNHT True H1975_Epitope_Rep1 1601.75680355953 1601.7551549037898 33.029 3 -1.2284680851912269 0.37479503396579994 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 123490 5079 VGPGAAQPE True PC9_epitope_Rep2 824.4028318981999 824.40172993586 24.912 2 -1.228682032460215 0.37482586451334526 1.0 ['ENST00000452270.5_1_20:34359956-34370264:+|nuORF', 'ENST00000374000.8_1_20:34359956-34388039:+|nuORF', 'ENST00000374012.7_1_20:34359956-34389442:+|nuORF'] 33921 5703 GLRGHHVP True NCI_RA007_Epitope_Rep2 871.47766860431 871.47656993586 26.798 2 -1.2287755463210426 0.37482586451334526 1.0 ['ENST00000525219.6_1_10:6008214-6019867:-|nuORF'] 110464 13795 TFENYYRKQRR True NCI_RA007_Epitope_Rep2 1559.7957082493897 1559.79460993586 58.308 2 -1.2287958416944371 0.37482586451334526 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 123695 5277 VGRAPKQA True PC9_epitope_Rep4 825.48208527841 825.48098993586 27.002 2 -1.2288143903634634 0.37482586451334526 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 119814 8962 VDALRLVSS True PC9_epitope_Rep4 958.54474510462 958.54364993586 42.019 2 -1.2288365841927213 0.37484589969919624 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 105807 6109 SSIQPRRRWWW True NCI_RA007_Epitope_Rep4 1556.8112987438797 1556.81020993586 30.112 2 -1.2289430765568765 0.37488596858896917 1.0 ['ENST00000591247.5_1_17:42113394-42113565:-|nuORF'] 69736 6552 LVEVQEPV True NCI_RA007_Epitope_Rep2 911.4963979298698 911.49530993586 30.098 2 -1.2289650412663988 0.37488596858896917 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant', 'ENST00000532739.1_1_16:16450692-16458759:+|nuORF', 'ENST00000532415.5_1_16:18480742-18495490:-|nuORF'] 3230 12335 AGERFHMVQ True PC9_epitope_Rep1 1073.5076484032497 1073.5065499358602 52.303 2 -1.2290193898598416 0.3749121704078991 1.0 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 16242 12490 EEERVAAVTL True PC9_epitope_Rep5 1115.5822528121498 1115.5811499358601 53.042 2 -1.2290468239747896 0.3749121704078991 1.0 ['ENSG00000114124|ENST00000682958|GRK7'] 71760 24819 MEFVRMKG True NCI_RA007_Epitope_Rep1 996.4884931817999 996.48738993586 102.74 2 -1.229051882691944 0.3749121704078991 1.0 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930'] 125479 6166 VIWQPMWE True PC9_epitope_Rep2 1087.51608782863 1087.51498993586 29.11 2 -1.2290529526147884 0.3749121704078991 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'nc|ENSG00000144406|Q8N2C7-3|UNC80', 'ENST00000478701.1_1_2:210636760-210659540:+|nuORF'] 11563 5284 DFVKYCVEEEE True NCI_RA007_Epitope_Rep2 1388.58059812964 1388.5795099358602 25.175 2 -1.2290562042093847 0.3749121704078991 1.0 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'GTF2I|p.T132Yfs*14|1|0.16|ENSG00000263001|chr7:74700266-74700278|CACAGTGGTACCT/-|frameshift_variant'] 100000 13250 SIPTERYFF True NCI_RA007_Epitope_Rep3 1158.57095985246 1158.5698699358602 59.395 2 -1.2290970103973222 0.3749198757457719 1.0 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 100763 8075 SLEDKAQLLPG True PC9_epitope_Rep5 1169.6292030045697 1169.6275649037902 35.999 3 -1.2292209952094637 0.37496456086286595 1.0 ['ENST00000375068.5_1_X:54834175-54835798:+|nuORF'] 142038 13829 YVLLASEQL True PC9_epitope_Rep3 1034.5648118428599 1034.56370993586 58.274 2 -1.2292653228073174 0.3749722653649878 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 121062 10653 VEQVKSETIS True NCI_RA007_Epitope_Rep4 1118.5819184589798 1118.58082993586 47.826 2 -1.2294214449194176 0.375053927792227 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 20401 13572 EPCKKPPRLCR True H1975_Epitope_Rep3 1325.7060309399699 1325.70492993586 57.487 2 -1.2296032164705417 0.375090897886239 1.0 ['ENSG00000132478|ENST00000589666|UNK'] 34142 7612 GNCNWFCE True PC9_epitope_Rep1 971.32657280679 971.32546993586 34.099 2 -1.2296108736612366 0.375090897886239 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630'] 34251 17290 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 73.279 2 -1.2296313145332582 0.375090897886239 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 60020 9810 LGKKAAGI True PC9_epitope_Rep4 756.4857736765199 756.48466993586 45.375 2 -1.2296408721237986 0.375090897886239 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 64310 8351 LPKSWADWRWF True NCI_RA007_Epitope_Rep5 1490.7459045226599 1490.74480993586 38.794 2 -1.2297287888034116 0.375090897886239 1.0 ['ENST00000539351.5_1_12:132569846-132570025:+|nuORF'] 106306 7169 STFQVFQE True PC9_epitope_Rep1 984.4552613938798 984.45416993586 32.387 2 -1.2297430550911237 0.375090897886239 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 127211 16702 VLVSGVHK True PC9_epitope_Rep2 837.5072373970901 837.50614993586 69.492 2 -1.2297530066073745 0.375090897886239 1.0 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B', 'ENST00000505756.1_1_5:137759865-137761276:+|nuORF'] 86505 13216 QLAAELAEYTA True H1975_Epitope_Rep1 1178.58191845898 1178.5813749679298 55.932 1 -1.2297574662203272 0.375090897886239 1.0 ['ENSG00000092820|ENST00000367075|EZR'] 4498 4985 AIYHHIKNR True NCI_RA007_Epitope_Rep3 1150.63596015086 1150.63432490379 26.606 3 -1.2298070428519903 0.37510630168726966 1.0 ['ENST00000426799.1_1_X:65041564-65042074:-|nuORF'] 60019 10278 LGKKAAGI True PC9_epitope_Rep2 756.4857736765199 756.48466993586 44.866 2 -1.2298245578077676 0.37510630168726966 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 112314 16496 TKYITKGWK True PC9_epitope_Rep2 1123.6389798426299 1123.6373249037902 68.693 3 -1.2298920328809377 0.3751109139307897 1.0 ['nc|ENSG00000116747|P10155-3|RO60', 'nc|ENSG00000116747|P10155-5|RO60', 'nc|ENSG00000116747|P10155-4|RO60', 'ENSG00000116747|ENST00000400968|RO60'] 52626 26725 KLPILPRDHS True PC9_epitope_Rep5 1174.68224163694 1174.68114993586 109.02 2 -1.2298925697888319 0.3751109139307897 1.0 ['nc|ENSG00000133106|Q96J88|EPSTI1', 'nc|ENSG00000133106|Q96J88-3|EPSTI1'] 64961 8308 LQEVAQRPSPP True H1975_Epitope_Rep1 1220.6513354314798 1220.6502299358601 36.888 2 -1.2298941825712955 0.3751109139307897 1.0 ['ANKRD24|p.A269V|1|0.21|ENSG00000089847|chr19:4207942-4207942|C/T|missense_variant'] 62819 11153 LLLVVLTPPPT True NCI_RA007_Epitope_Rep4 1161.7372969015698 1161.73564490379 49.774 3 -1.2299443543483777 0.3751109139307897 1.0 ['nc|ENSG00000107821|Q96I82-2|KAZALD1', 'ENSG00000107821|ENST00000370200|KAZALD1'] 125236 9929 VIKKGRFIKI True NCI_RA007_Epitope_Rep2 1200.8070482272399 1200.80539490379 43.247 3 -1.2299478044376264 0.3751109139307897 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9'] 112887 6557 TLKQGDKEIGP True H1975_Epitope_Rep1 1184.6401020414398 1184.63900993586 30.279 2 -1.2299576444210765 0.3751109139307897 1.0 ['nc|ENSG00000133135|Q8TEB7-2|RNF128', 'ENSG00000133135|ENST00000255499|RNF128'] 78833 12314 PADWWRWRRS True H1975_Epitope_Rep3 1414.70068566574 1414.69958993586 52.549 2 -1.229993276289845 0.3751109139307897 1.0 ['ENST00000609181.5_1_1:220219711-220219759:-|nuORF'] 81472 11525 PLGDRIIESFF True H1975_Epitope_Rep3 1292.6764875501597 1292.67538993586 49.457 2 -1.2300258182533053 0.37513401604495544 1.0 ['ENSG00000166869|ENST00000300113|CHP2'] 12721 19778 DLEDKKLIN True PC9_epitope_Rep4 1086.5920892198599 1086.59098993586 84.201 2 -1.230033099796264 0.37513401604495544 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'WDR36|p.G819Wfs*14|1|0.11|ENSG00000134987|chr5:111124123-111124124|-/T|frameshift_variant', 'ENSG00000134987|ENST00000513710|WDR36'] 84746 3510 QDSVTFED True PC9_epitope_Rep4 939.38215602327 939.38104993586 19.584 2 -1.2300359112123729 0.37513401604495544 1.0 ['ENSG00000188321|ENST00000603380|ZNF559', 'nc|ENSG00000188321|Q9BR84-2|ZNF559'] 83146 23333 PSRQESSC True NCI_RA007_Epitope_Rep3 892.37088014692 892.36978993586 101.33 2 -1.2300587896094546 0.3751370934946826 1.0 ['ENSG00000102901|ENST00000562787|CENPT', 'ENST00000436104.6_1_16:67865250-67867798:-|nuORF', 'nc|ENSG00000102901|Q96BT3-2|CENPT', 'ENST00000565157.5_1_16:67864257-67867798:-|nuORF', 'ENST00000569862.5_1_16:67865068-67866179:-|nuORF', 'ENST00000562947.5_1_16:67864542-67866179:-|nuORF', 'ENST00000564128.1_1_16:67865591-67866126:-|nuORF'] 115986 23577 TSKKTGGG True PC9_epitope_Rep2 734.3922672144998 734.39171496793 96.164 1 -1.2301143718809837 0.3751370934946826 1.0 ['ENST00000426393.5_1_1:63786855-63787154:-|nuORF', 'ENST00000418244.5_1_1:63786852-63787391:-|nuORF', 'ENST00000431294.5_1_1:63786852-63789241:-|nuORF'] 110870 6472 TGSALPDPQ True NCI_RA007_Epitope_Rep4 884.4239612655999 884.4234149679301 31.492 1 -1.2301548862616973 0.3751401707927197 1.0 ['ENSG00000173762|ENST00000312648|CD7'] 25778 24271 FEVKSVFMVEI True PC9_epitope_Rep5 1326.68936073298 1326.68877496793 98.371 1 -1.2301950452002153 0.3751401707927197 1.0 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 14448 9045 DTEKLKMYHSL True NCI_RA007_Epitope_Rep2 1363.68058695443 1363.6794899358601 39.784 2 -1.2303962159123485 0.37519561333251183 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 49734 26089 KGRGGENR True PC9_epitope_Rep2 872.45766143572 872.45656993586 106.29 2 -1.2304102948832003 0.37519561333251183 1.0 ['ENST00000265735.11_1_7:94285424-94285505:-|nuORF'] 2152 7357 AELQRLVA True PC9_epitope_Rep5 898.5236157372199 898.52250993586 33.257 2 -1.2304141704277975 0.37519561333251183 1.0 ['ENSG00000150779|ENST00000504148|TIMM8B'] 15889 6960 EDISTEDGDRL True H1975_Epitope_Rep1 1248.54698950224 1248.54588993586 31.811 2 -1.230458574693512 0.37519561333251183 1.0 ['ENSG00000086827|ENST00000200135|ZW10'] 104140 9032 SQEMNTLFRFW True PC9_epitope_Rep3 1457.6761702803296 1457.6750699358602 39.684 2 -1.230569348476219 0.3751986889609029 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 7805 6868 ASVERSQYPQS True NCI_RA007_Epitope_Rep4 1250.58912909774 1250.58802993586 33.037 2 -1.2305743554163457 0.3751986889609029 1.0 ['ARAP2|p.P1501Qfs*6|1|1.0|ENSG00000047365|chr4:36083374-36083374|G/-|frameshift_variant', 'ENSG00000047365|ENST00000303965|ARAP2', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 101392 19842 SLKKFLNTK True PC9_epitope_Rep5 1077.65462990677 1077.6535299358602 81.37 2 -1.2305777064968875 0.3752063875403534 1.0 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167412900-167416770:+|nuORF', 'ENST00000494781.5_1_6:167412945-167425107:+|nuORF'] 36767 14261 GVKNWHWMKLY True H1975_Epitope_Rep2 1460.73871096724 1460.73760993586 60.004 2 -1.2306030780125359 0.37520944214468754 1.0 ['MYH6|p.P830H|1|0.28|ENSG00000197616|chr14:23394264-23394264|G/T|missense_variant'] 9571 13356 AWPLPVRP True NCI_RA007_Epitope_Rep5 934.5388718785399 934.53776993586 58.06 2 -1.2306331958621501 0.37520944214468754 1.0 ['ENST00000395621.7_1_22:51066128-51066413:-|nuORF', 'ENST00000356098.9_1_22:51066128-51066491:-|nuORF', 'ENST00000216124.9_1_22:51066128-51066491:-|nuORF'] 67486 7780 LSSTEIRRHS True NCI_RA007_Epitope_Rep1 1184.6261833127999 1184.6250899358602 34.253 2 -1.2306626391711484 0.37520944214468754 1.0 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'nc|ENSG00000147548|Q9BZ95-2|NSD3'] 120850 21588 VELRVLALP True PC9_epitope_Rep3 1008.6331661861998 1008.63206993586 88.334 2 -1.2307082936810836 0.37520944214468754 1.0 ['ENSG00000173621|ENST00000309602|LRFN4'] 130423 9286 VSLTWEEWERL True H1975_Epitope_Rep1 1446.71432961086 1446.71269490379 40.63 3 -1.2307222928888664 0.37520944214468754 1.0 ['ENSG00000160908|ENST00000337673|ZNF394', 'ENST00000481881.1_1_7:99096270-99097704:-|nuORF'] 129839 10006 VRRPRRIQR True NCI_RA007_Epitope_Rep2 1235.77993904595 1235.77828490379 43.533 3 -1.2307574653390407 0.37520944214468754 1.0 ['ENST00000499521.2_1_5:148878853-148880688:-|nuORF'] 130247 4821 VSFSPAQK True NCI_RA007_Epitope_Rep3 862.4548674710599 862.45376993586 25.933 2 -1.2307592546402961 0.37520944214468754 1.0 ['ENST00000463171.5_1_3:189681716-189688667:-|nuORF'] 59406 16126 LFLPNLIPL True PC9_epitope_Rep6 1038.6477536211798 1038.64664993586 74.372 2 -1.2307694254519774 0.37520944214468754 1.0 ['ENST00000532268.1_1_11:126134081-126134120:-|nuORF'] 707 10779 AAVDLILR True PC9_epitope_Rep5 869.53345214493 869.53234993586 46.453 2 -1.2307857863931806 0.37520944214468754 1.0 ['ENST00000542785.5_2_12:1058615-1058780:-|nuORF'] 92488 12231 RLWFTYRRKF True NCI_RA007_Epitope_Rep4 1471.8200725224299 1471.8184349037901 54.041 3 -1.2307957773970661 0.37520944214468754 1.0 ['nc|ENSG00000101844|Q8WYN0-2|ATG4A', 'ENSG00000101844|ENST00000372232|ATG4A'] 14263 4283 DSQPNSTR True PC9_epitope_Rep1 903.40462280335 903.40352993586 21.366 2 -1.2308002168868855 0.37521713954834973 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|143|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|103|2|sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|21|1|sense'] 3402 20392 AGIKEEIRR True PC9_epitope_Rep6 1070.6196413803798 1070.61854993586 91.136 2 -1.231112091020941 0.3752818124699708 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 97709 12142 SEIEILAVDLP True H1975_Epitope_Rep1 1197.6492697428098 1197.64816993586 51.721 2 -1.2311669483832373 0.3752818124699708 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 87065 14350 QNIEYEYQNPR True H1975_Epitope_Rep1 1452.6633566671599 1452.66224993586 60.39 2 -1.23121963642755 0.37530182821662644 1.0 ['ENSG00000196757|ENST00000254321|ZNF700', 'nc|ENSG00000198429|Q9UC07-2|ZNF69', 'ENSG00000197054|ENST00000358987|ZNF763', 'nc|ENSG00000197054|Q0D2J5-2|ZNF763', 'ENSG00000198429|ENST00000429654|ZNF69', 'nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 101765 21606 SLNRPRFR True PC9_epitope_Rep3 1044.59409533888 1044.59298993586 88.405 2 -1.231286374286803 0.37531721979944316 1.0 ['ENST00000520312.1_1_8:89554881-89721577:+|nuORF', 'ENST00000518631.1_1_8:89554881-89555040:+|nuORF', 'ENST00000521433.1_1_8:89341227-89721666:+|nuORF'] 46880 12472 ITLFPFIPP True PC9_epitope_Rep4 1043.60555445603 1043.6044499358602 55.78 2 -1.2313476642784154 0.37531721979944316 1.0 ['ENST00000542104.5_2_12:65089764-65089941:+|nuORF'] 142040 11751 YVLLASEQL True PC9_epitope_Rep6 1034.5648118428599 1034.56370993586 56.359 2 -1.2314196862233229 0.3753449295358234 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 10819 16488 CSQYRLPGCPR True PC9_epitope_Rep4 1278.5961461378197 1278.59449490379 71.391 3 -1.2314282225717417 0.3753449295358234 1.0 ['nc|ENSG00000128040|P20155|SPINK2', 'ENSG00000128040|ENST00000506738|SPINK2'] 95047 7710 RTSSTPEP True PC9_epitope_Rep1 873.4192102383299 873.41810993586 34.477 2 -1.2314390863815283 0.3753526245118691 1.0 ['nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 104568 6109 SQQLQCQPSLL True H1975_Epitope_Rep3 1243.6230720783099 1243.62196993586 28.51 2 -1.2314720226178932 0.3753633899975363 1.0 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2'] 130016 11993 VSAIRKFL True PC9_epitope_Rep5 932.5807366905199 932.57962993586 51.126 2 -1.23148967326703 0.3753633899975363 1.0 ['nc|ENSG00000167077|Q5TIA1-5|MEI1', 'nc|ENSG00000167077|Q5TIA1-3|MEI1', 'nc|ENSG00000167077|Q5TIA1-2|MEI1', 'ENSG00000167077|ENST00000401548|MEI1', 'SREBF2-MEI1|1|fusion'] 101593 15393 SLLPDKKTV True PC9_epitope_Rep4 999.59644632431 999.59534993586 67.142 2 -1.2314986874132925 0.3753633899975363 1.0 ['ENSG00000145632|ENST00000274289|PLK2'] 75493 23441 NKLKIKHTCR True H1975_Epitope_Rep2 1239.7233952562701 1239.72175490379 96.637 3 -1.2315777824539975 0.3753664605454411 1.0 ['FAM167A|p.E154K|1|0.49|ENSG00000154319|chr8:11424558-11424558|C/T|missense_variant'] 44181 5200 IIWYYFPS True PC9_epitope_Rep1 1087.5378688190299 1087.53676993586 24.852 2 -1.2316122653487982 0.3753664605454411 1.0 ['nc|ENSG00000185737|P56975-3|NRG3'] 44518 12073 ILLQIKHIIR True NCI_RA007_Epitope_Rep4 1245.8285119478098 1245.8268749037902 53.438 3 -1.2317061885545066 0.3753895424031533 1.0 ['ENSG00000114999|ENST00000233336|TTL', 'ENST00000476615.1_1_2:113258880-113278003:+|nuORF'] 97135 7339 SDNDMSAVYRA True NCI_RA007_Epitope_Rep1 1227.51900093259 1227.5179099358602 32.541 2 -1.2317087462902045 0.3753895424031533 1.0 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 42649 5104 IEHFQPNAD True NCI_RA007_Epitope_Rep2 1069.48287312405 1069.48176993586 24.477 2 -1.2317297335163893 0.3753895424031533 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 92706 22247 RNRYWKEHH True NCI_RA007_Epitope_Rep5 1324.65373547332 1324.6526299358602 92.721 2 -1.2317817756252882 0.3754033747998522 1.0 ['ENSG00000162482|ENST00000361640|AKR7A3'] 30270 15375 GAAAATEKVQL True PC9_epitope_Rep1 1057.5767735088898 1057.57566993586 63.957 2 -1.231794779116527 0.3754033747998522 1.0 ['ENSG00000180921|ENST00000388913|FAM83H'] 42297 9462 IDVTYNVP True H1975_Epitope_Rep2 919.46509780159 919.46400993586 41.363 2 -1.2318005436829584 0.3754033747998522 1.0 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 4540 24105 AKIIAEGANG True H1975_Epitope_Rep3 942.51344497634 942.51234993586 100.44 2 -1.2318216387184007 0.3754033747998522 1.0 ['nc|ENSG00000148672|P00367-3|GLUD1', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1', 'nc|ENSG00000148672|P00367-2|GLUD1'] 36341 3864 GVEQRWETMP True PC9_epitope_Rep2 1231.56555720219 1231.5639149037902 20.129 3 -1.2318357483800728 0.3754033747998522 1.0 ['ENST00000594286.5_1_19:53625810-53636169:-|nuORF'] 124620 8368 VGWGGSWG True NCI_RA007_Epitope_Rep3 804.3554877829599 804.35493496793 40.018 1 -1.2319011093270253 0.3754233843652622 1.0 ['ENST00000461023.5_1_16:343426-396314:-|nuORF'] 134977 21024 WCDWRLHTP True H1975_Epitope_Rep2 1212.5498475683999 1212.54820490379 87.022 3 -1.2319835324180828 0.3754634020174153 1.0 ['OR11H12|p.P186Kfs*4|1|0.17|ENSG00000257115|chr14:18601671-18601672|CC/-|frameshift_variant', 'ENSG00000257115|ENST00000550708|OR11H12'] 23269 16624 EVPPGPLPEAV True PC9_epitope_Rep6 1103.5862755634298 1103.5851699358602 76.409 2 -1.2319979488508483 0.3754634020174153 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 37621 11280 GVVVDCLPVL True PC9_epitope_Rep4 1012.5627036678799 1012.56160993586 51.166 2 -1.2320930163148882 0.3754664696101977 1.0 ['ENSG00000134152|ENST00000256544|KATNBL1', 'chr15:34154684-34154786|142|20.16|0.51|5.31|-|ENST00000560310|KATNBL1,KATNBL1', 'ENST00000562413.2_1_6:147124063-147124576:-|nuORF', 'ENST00000540594.5_1_15:34439399-34502250:-|nuORF'] 80502 20767 PGMVAHAS True H1975_Epitope_Rep2 768.35885891124 768.35776993586 85.992 2 -1.2320954499063912 0.3754664696101977 1.0 ['ENST00000295628.3_1_3:120045250-120045442:-|nuORF'] 82578 4618 PPVSTEYTYY True H1975_Epitope_Rep3 1218.5444703210999 1218.54336993586 22.885 2 -1.232204236465642 0.3755187999556634 1.0 ['ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 123704 19350 VGRCATSK True PC9_epitope_Rep2 820.4225217969599 820.42142993586 79.806 2 -1.2322091965309485 0.3755187999556634 1.0 ['nc|ENSG00000154639|P78310-3|CXADR'] 131673 12399 VTMLDNFPTN True PC9_epitope_Rep5 1150.53286009158 1150.5317699358602 52.689 2 -1.232230103332953 0.37553880637454123 1.0 ['ENST00000546621.5_1_12:56668606-56679804:-|nuORF', 'ENSG00000062485|ENST00000351328|CS', 'ENST00000547912.1_1_12:56676173-56676410:-|nuORF', 'ENST00000547449.1_1_12:56676173-56676733:-|nuORF'] 113880 4994 TNPQLVEI True PC9_epitope_Rep3 912.4916469025999 912.49054993586 24.301 2 -1.2322813888467719 0.3755588123006441 1.0 ['ENST00000532940.5_1_8:144921262-144922356:-|nuORF'] 68399 9475 LTESPSPDP True H1975_Epitope_Rep3 941.43419159613 941.43364496793 41.449 1 -1.2323781923272954 0.37564039408866995 1.0 ['ENST00000270645.7_1_19:50046533-50046872:+|nuORF'] 62814 15330 LLLVSSPP True NCI_RA007_Epitope_Rep4 824.50075503432 824.50020496793 66.625 1 -1.232401132258057 0.3756711492044727 1.0 ['ENST00000428865.2_1_6:74404306-74404579:-|nuORF'] 61199 20400 LILIFEWWYFR True H1975_Epitope_Rep1 1584.8493069620401 1584.84820993586 84.841 2 -1.2324293622453557 0.3756711492044727 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF', 'nc|ENSG00000004866|Q9NRC1-7|ST7'] 115600 13140 TRTQKEEL True PC9_epitope_Rep3 1003.5298233164699 1003.52872993586 55.571 2 -1.232431559534406 0.3756711492044727 1.0 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF'] 54441 6098 KYFVSYYKM True NCI_RA007_Epitope_Rep1 1227.59981745259 1227.59818490379 27.758 3 -1.232453083397045 0.3756711492044727 1.0 ['RXFP1|p.A77V|1|0.14|ENSG00000171509|chr4:158593443-158593443|C/T|missense_variant'] 92898 16575 RPFVPLAVT True NCI_RA007_Epitope_Rep3 998.5913013742198 998.59020993586 72.985 2 -1.2324584300641228 0.3756788375100055 1.0 ['nc|ENSG00000196091|Q00872-5|MYBPC1', 'nc|ENSG00000196091|Q00872-3|MYBPC1', 'nc|ENSG00000196091|Q00872-9|MYBPC1', 'nc|ENSG00000196091|Q00872-8|MYBPC1', 'nc|ENSG00000196091|Q00872-7|MYBPC1', 'nc|ENSG00000196091|Q00872-10|MYBPC1', 'nc|ENSG00000196091|Q00872-2|MYBPC1', 'ENSG00000196091|ENST00000361466|MYBPC1', 'nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 125443 8715 VITYRASP True PC9_epitope_Rep1 905.49706663621 905.49596993586 38.36 2 -1.2324740254029314 0.37568652562618526 1.0 ['ENST00000538137.6_1_18:22930939-22932115:-|nuORF', 'ENST00000361524.7_1_18:22902141-22932115:-|nuORF', 'ENST00000583005.5_1_18:22902106-22932121:-|nuORF'] 1745 4814 AEGQFYSYFPN True H1975_Epitope_Rep3 1321.5615173675696 1321.5604299358602 23.643 2 -1.232537887597314 0.37569421355301885 1.0 ['TBX21|p.N531S|1|0.14|ENSG00000073861|chr17:47745350-47745350|A/G|missense_variant'] 72474 12852 MLARGQPLP True PC9_epitope_Rep5 981.54297128281 981.54186993586 54.445 2 -1.2326534233812054 0.37575115752142646 1.0 ['ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.Y538Tfs*75|1|0.38|ENSG00000127616|chr19:10996227-10996227|G/-|frameshift_variant', 'SMARCA4|p.P601Rfs*12|1|0.36|ENSG00000127616|chr19:10996533-10996533|C/-|frameshift_variant', 'SMARCA4|p.K572Gfs*75|1|0.55|ENSG00000127616|chr19:10996333-10996343|AAGGCTGCCCA/-|frameshift_variant'] 3867 10412 AGYMEPYEAQR True H1975_Epitope_Rep1 1313.57103650545 1313.56992993586 45.001 2 -1.2327549822099229 0.3758034724787588 1.0 ['ENSG00000107338|ENST00000377707|SHB', 'nc|ENSG00000107338|Q15464-2|SHB'] 46089 9147 ISHFSQDDL True PC9_epitope_Rep3 1060.48253877088 1060.4814499358602 40.124 2 -1.232770827129214 0.3758034724787588 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'nc|ENSG00000112249|Q8N3C0-4|ASCC3', 'ENST00000468245.2_1_6:101296020-101315873:-|nuORF'] 78839 14253 PAEHLEDRL True PC9_epitope_Rep4 1078.54072235334 1078.5396299358601 62.729 2 -1.232812453543068 0.37581115858689096 1.0 ['ENSG00000259956|ENST00000563281|RBM15B'] 116957 5938 TVGFHLAGS True NCI_RA007_Epitope_Rep3 887.4501164437899 887.44900993586 30.336 2 -1.2329393458028641 0.37581884450573805 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 66077 9301 LSEIQALRA True H1975_Epitope_Rep1 999.5712942056299 999.57018993586 40.684 2 -1.232990322564545 0.3758465289235846 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 69130 8162 LTRLQHLAE True H1975_Epitope_Rep3 1079.60874234351 1079.60764993586 36.374 2 -1.2330174010867765 0.3758465289235846 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF', 'HUWE1|p.V474Cfs*21|1|0.25|ENSG00000086758|chrX:53627479-53627480|-/A|frameshift_variant'] 122348 2634 VGDELPWGWEA True NCI_RA007_Epitope_Rep5 1257.56660274801 1257.56550993586 14.819 2 -1.233053495938284 0.37585421412300685 1.0 ['nc|ENSG00000151718|Q6AWC2-4|WWC2', 'ENSG00000151718|ENST00000403733|WWC2', 'nc|ENSG00000151718|Q6AWC2-6|WWC2'] 57205 18237 LDVQRYPLY True PC9_epitope_Rep1 1165.6131590176099 1165.61206993586 74.94 2 -1.233080150481089 0.37588189664725363 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 31300 6698 GDIVTGVYTG True PC9_epitope_Rep5 980.48147614172 980.48036993586 30.735 2 -1.233101472447024 0.37588189664725363 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 47680 11308 IWYPPNHVFH True PC9_epitope_Rep1 1308.64037682496 1308.63926993586 48.376 2 -1.2331993530292884 0.37590189366889115 1.0 ['ENSG00000096968|ENST00000381652|JAK2'] 34270 16360 GNTLTSLK True NCI_RA007_Epitope_Rep1 832.46543215476 832.46432993586 67.749 2 -1.233220800185088 0.3759203171554505 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 86868 15377 QLRDIKECL True PC9_epitope_Rep5 1116.59612905448 1116.59502993586 64.156 2 -1.2332464487679913 0.3759203171554505 1.0 ['ENSG00000121892|ENST00000303538|PDS5A'] 105755 7736 SSGERWIRY True NCI_RA007_Epitope_Rep3 1152.5676058075198 1152.56650993586 37.552 2 -1.233257234704616 0.3759203171554505 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 94395 8438 RRRRHSHGREW True PC9_epitope_Rep2 1531.8093416812699 1531.80769490379 37.827 3 -1.2332628855030003 0.3759203171554505 1.0 ['ENST00000376395.8_2_9:86322580-86322796:-|nuORF'] 5703 17175 APALEVLPEQ True PC9_epitope_Rep4 1065.57062549929 1065.5695299358601 74.069 2 -1.233286474192783 0.375940312473068 1.0 ['ENST00000269886.7_1_19:4361371-4361503:-|nuORF'] 138213 22983 YGSHGRRG True NCI_RA007_Epitope_Rep4 888.43144668788 888.43034993586 99.811 2 -1.2333659460612227 0.37596030729833546 1.0 ['ENSG00000106006|ENST00000222728|HOXA6'] 80318 14880 PGGFGGPG True H1975_Epitope_Rep1 644.29182489724 644.29127496793 62.47 1 -1.2334119498657767 0.3759679901508156 1.0 ['CON__Q3TTY5'] 20317 5343 ENTSIRIGP True NCI_RA007_Epitope_Rep3 985.5192586327698 985.51816993586 28.025 2 -1.233471627765296 0.3759833552882662 1.0 ['ENSG00000105613|ENST00000251472|MAST1'] 38409 7708 HENCKHTRL True PC9_epitope_Rep2 1136.5509101975601 1136.5492649037901 35.025 3 -1.2334774287017685 0.3759833552882662 1.0 ['ZNF142|p.P927Hfs*90|1|0.16|ENSG00000115568|chr2:218643736-218643736|G/-|frameshift_variant', 'ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 32774 12508 GHDPIILNF True PC9_epitope_Rep6 1024.53418042092 1024.53308993586 59.539 2 -1.2336745360161965 0.37608489578844995 1.0 ['ENST00000295112.13_1_2:55509501-55511570:+|nuORF', 'nc|ENSG00000293422|A6NEY8|PRORSD1P'] 65666 8095 LSAPDHRVP True PC9_epitope_Rep2 990.52467836638 990.52358993586 36.496 2 -1.2336880206281609 0.37608489578844995 1.0 ['ENST00000247706.3_1_19:17411946-17414055:-|nuORF'] 27333 14786 FLSGYMWY True H1975_Epitope_Rep2 1065.46298962661 1065.4618899358602 62.033 2 -1.233722355704575 0.3761248784331105 1.0 ['ENSG00000123684|ENST00000366997|LPGAT1'] 61761 15864 LLAIHQRKHT True H1975_Epitope_Rep3 1215.72002412799 1215.7189299358602 66.469 2 -1.2337507087536261 0.3761248784331105 1.0 ['nc|ENSG00000197162|A8K8V0-2|ZNF785', 'ENSG00000197162|ENST00000395216|ZNF785'] 61227 7914 LILYSVLRLN True NCI_RA007_Epitope_Rep3 1202.7386938839 1202.7370349037901 38.24 3 -1.2338087787268217 0.3761402385729937 1.0 ['ENSG00000181023|ENST00000317121|OR56B1'] 81229 18730 PKGVSRKLDRL True NCI_RA007_Epitope_Rep3 1267.77245362367 1267.7713499358601 81.906 2 -1.233874137282514 0.3761402385729937 1.0 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 33858 12770 GLPLPRDLP True PC9_epitope_Rep6 976.57056592964 976.56946993586 60.614 2 -1.2339349377546827 0.37614791835930766 1.0 ['nc|ENSG00000171462|Q6UY11-2|DLK2', 'ENSG00000171462|ENST00000372488|DLK2'] 101452 9058 SLKYECRPEYY True PC9_epitope_Rep1 1449.6598515098501 1449.6587499358602 39.692 2 -1.2339809605073941 0.37615559795654585 1.0 ['ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF', 'nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1'] 80576 6311 PGPSLAGK True NCI_RA007_Epitope_Rep3 725.40718900265 725.4066449679301 31.827 1 -1.234014369237932 0.37616327736471517 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 72739 23552 MNKAHGCE True NCI_RA007_Epitope_Rep5 888.3582072882399 888.35710993586 97.905 2 -1.2340926033711188 0.3761832662456762 1.0 ['TOP3B|p.G143C|1|0.21|ENSG00000100038|chr22:21970364-21970364|C/A|missense_variant'] 101254 13378 SLHVPPETLG True PC9_epitope_Rep1 1048.5553097883198 1048.5542099358602 56.318 2 -1.2341189128939853 0.3761986238136855 1.0 ['ENSG00000150048|ENST00000315330|CLEC1A'] 13470 23337 DNGNTNAN True H1975_Epitope_Rep2 818.3154734457801 818.3149249679301 96.233 1 -1.2341712548839001 0.3761986238136855 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 44452 12769 ILKCWRESEKP True NCI_RA007_Epitope_Rep2 1387.7282058531896 1387.7271099358602 54.286 2 -1.2341850013487947 0.3762016715697739 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2'] 105756 11616 SSGERWIRY True PC9_epitope_Rep1 1152.5676058075198 1152.56650993586 49.559 2 -1.2342822392264567 0.3762016715697739 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 41750 16072 IANYLVWRMVY True PC9_epitope_Rep3 1426.7431276413402 1426.74202993586 66.971 2 -1.2343040741011926 0.3762216587479383 1.0 ['ENSG00000102174|ENST00000379374|PHEX'] 28328 17650 FRRRRWRRRM True PC9_epitope_Rep4 1574.9065536247397 1574.90491490379 75.915 3 -1.2345174956043543 0.37630318919783856 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 34460 23442 GPKKTKRE True PC9_epitope_Rep5 942.5610638750999 942.55996993586 95.153 2 -1.2346410341135883 0.376343159579051 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 109233 10684 TARLVLPTDA True NCI_RA007_Epitope_Rep1 1055.59750895347 1055.59640993586 45.549 2 -1.2346761823022616 0.376343159579051 1.0 ['ENSG00000248383|ENST00000253807|PCDHAC1', 'PCDHAC1|p.D779Tfs*9|1|0.31|ENSG00000248383|chr5:140929225-140929225|C/-|frameshift_variant', 'nc|ENSG00000248383|Q9H158-2|PCDHAC1'] 23034 12114 EVGRVQDFLG True PC9_epitope_Rep6 1118.5720224816198 1118.57092993586 57.939 2 -1.2347997336769558 0.37638776062821555 1.0 ['ENSG00000162040|ENST00000454677|HS3ST6'] 69327 7891 LTVGFDESTLI True PC9_epitope_Rep2 1193.61796961453 1193.61631490379 35.718 3 -1.2348590666971888 0.3764031114612052 1.0 ['VCAN|p.S566F|1|0.18|ENSG00000038427|chr5:83520003-83520003|C/T|missense_variant'] 67824 12074 LTAFVTLRL True PC9_epitope_Rep4 1032.6331661861998 1032.63206993586 54.248 2 -1.2348700484833457 0.3764031114612052 1.0 ['ENST00000415602.5_3_20:62694892-62695267:+|nuORF'] 109238 8013 TARSGLPSI True PC9_epitope_Rep4 900.5028802926399 900.50178993586 38.273 2 -1.234906829628502 0.37641846153846154 1.0 ['ENST00000487949.4_1_1:6531427-6531640:-|nuORF'] 58218 5570 LELFYVKYRNL True PC9_epitope_Rep5 1456.8078360728798 1456.8061949037901 26.428 3 -1.234920261112173 0.37641846153846154 1.0 ['nc|ENSG00000124177|Q8TD26-2|CHD6'] 120331 5412 VEEDFKPAP True H1975_Epitope_Rep3 1030.4971262058598 1030.4960299358602 25.879 2 -1.2349829951225222 0.3764384438345374 1.0 ['nc|ENSG00000133641|Q8N999-3|RLIG1', 'ENST00000552121.5_1_12:88429328-88442196:+|nuORF', 'ENST00000547468.1_1_12:88436564-88442196:+|nuORF', 'ENSG00000133641|ENST00000356891|C12orf29', 'ENST00000550333.5_1_12:88429286-88442196:+|nuORF', 'ENST00000552803.5_1_12:88429407-88437530:+|nuORF', 'ENST00000548511.5_1_12:88429578-88437530:+|nuORF', 'ENST00000552847.5_1_12:88429328-88439561:+|nuORF'] 115599 12970 TRTQKEEL True PC9_epitope_Rep3 1003.5298233164699 1003.52872993586 54.915 2 -1.235080107028158 0.3764675478106771 1.0 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF'] 16194 7245 EEEEDKEEESP True H1975_Epitope_Rep1 1348.5154145904398 1348.5143099358602 32.878 2 -1.2351064488241361 0.3764675478106771 1.0 ['MICALL1|p.A438S|1|0.26|ENSG00000100139|chr22:37925890-37925890|G/T|missense_variant'] 7612 6568 ASFQDRTAAP True NCI_RA007_Epitope_Rep5 1062.50942222506 1062.50832993586 31.926 2 -1.2351880787509002 0.3764675478106771 1.0 ['TMC2|p.E109D|1|0.45|ENSG00000149488|chr20:2558700-2558700|G/C|missense_variant'] 97549 8575 SEERQLAVL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 40.464 2 -1.2352081513533495 0.3764675478106771 1.0 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF'] 142193 14401 YVVHELVP True PC9_epitope_Rep1 954.5174677276199 954.51636993586 60.217 2 -1.2352148549313255 0.3764675478106771 1.0 ['ELAC1|p.K264Nfs*9|1|0.3|ENSG00000141642|chr18:50986782-50986782|A/-|frameshift_variant', 'ENSG00000141642|ENST00000269466|ELAC1'] 86783 23272 QLLVRRLKAGV True PC9_epitope_Rep5 1251.81392451283 1251.81226490379 94.502 3 -1.2352304412052413 0.3764675478106771 1.0 ['ENSG00000123454|ENST00000393056|DBH'] 120712 8291 VEKIPQSH True NCI_RA007_Epitope_Rep1 936.5028802926402 936.50178993586 36.251 2 -1.235233119378198 0.3764675478106771 1.0 ['ENSG00000115365|ENST00000450366|LANCL1'] 7837 7912 ASVRRSLFNNA True PC9_epitope_Rep4 1233.65781779425 1233.65672993586 37.864 2 -1.2353225043767506 0.3764875275354115 1.0 ['ENSG00000130227|ENST00000252512|XPO7'] 139174 21941 YLEDRRVV True H1975_Epitope_Rep3 1048.56654317836 1048.5654499358602 91.722 2 -1.2353583282805434 0.37650287345713196 1.0 ['EGFR|p.L833V|1|0.92|ENSG00000146648|chr7:55191746-55191746|T/G|missense_variant'] 106942 16052 SVDVKLEN True PC9_epitope_Rep5 902.4709114580199 902.46980993586 66.732 2 -1.2353627558166695 0.37650287345713196 1.0 ['nc|ENSG00000064933|P54277-2|PMS1', 'nc|ENSG00000064933|P54277-3|PMS1', 'ENSG00000064933|ENST00000441310|PMS1', 'ENST00000421722.5_1_2:190656520-190720594:+|nuORF'] 2663 19053 AESLVHVHFKE True H1975_Epitope_Rep2 1294.66698549562 1294.6658899358602 79.093 2 -1.235429150016346 0.3765228520095494 1.0 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'ENST00000494938.2_1_3:47466973-47468693:-|nuORF'] 34273 15845 GNTLTSLK True NCI_RA007_Epitope_Rep4 832.46543215476 832.46432993586 68.809 2 -1.2355140737448311 0.3765551357936576 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 86741 22842 QLLELVEL True PC9_epitope_Rep4 955.5589981864299 955.55790993586 96.085 2 -1.2355910384478146 0.3765749581651737 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 64202 9641 LPGLEKKP True NCI_RA007_Epitope_Rep2 880.5382031721999 880.53710993586 42.116 2 -1.2356159686317147 0.3765749581651737 1.0 ['CECR2|p.E962K|1|0.53|ENSG00000099954|chr22:17542967-17542967|G/A|missense_variant'] 88794 5898 QTSQVLTAV True PC9_epitope_Rep4 945.5131106231698 945.51200993586 29.587 2 -1.2356401041099312 0.3765749581651737 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 82982 20977 PSFLFSEQAW True PC9_epitope_Rep3 1210.5658744720197 1210.56476993586 85.97 2 -1.2356692407968801 0.3765749581651737 1.0 ['ENST00000556808.1_1_X:53114705-53115656:+|nuORF'] 126971 10127 VLRPLYMDVQ True NCI_RA007_Epitope_Rep5 1232.6587293110401 1232.65762993586 45.587 2 -1.2356923141317704 0.3765749581651737 1.0 ['ENSG00000244005|ENST00000374092|NFS1', 'nc|ENSG00000244005|Q9Y697-3|NFS1', 'ENST00000421540.1_1_20:34280185-34287249:-|nuORF'] 18403 7306 EIVINESR True NCI_RA007_Epitope_Rep2 958.5083595959 958.50726993586 33.038 2 -1.2357497595634712 0.3765749581651737 1.0 ['nc|ENSG00000162374|P26378-3|ELAVL4'] 49622 20489 KGFIQKTCLIA True PC9_epitope_Rep6 1220.69511481976 1220.69400993586 91.532 2 -1.2357537266832748 0.3765749581651737 1.0 ['ENSG00000256683|ENST00000243644|ZNF350'] 118806 14228 VAAGAILGWP True PC9_epitope_Rep2 953.5334521449299 953.53234993586 59.995 2 -1.2357929554190032 0.3765749581651737 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9', 'ENST00000530851.6_1_11:111724165-111739381:-|nuORF'] 26014 8915 FGGAKVAG True NCI_RA007_Epitope_Rep5 705.3809742548099 705.38042496793 40.954 1 -1.235847116808219 0.3765749581651737 1.0 ['ENST00000378097.5_1_1:6052749-6100615:+|nuORF'] 29951 9396 FWDQWYLWYLR True NCI_RA007_Epitope_Rep2 1674.7983340183398 1674.79722993586 41.157 2 -1.2358849001655656 0.3765902994807688 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 24931 7042 FCLAFIGK True PC9_epitope_Rep3 897.4782457679299 897.47714993586 32.097 2 -1.2358936653008092 0.3765902994807688 1.0 ['nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 87223 5162 QPKGASIP True NCI_RA007_Epitope_Rep1 796.4443027873599 796.44320993586 24.162 2 -1.2359202053357172 0.37659333628623454 1.0 ['ENST00000368457.2_1_1:154934069-154934114:-|nuORF'] 21495 6403 ERLQELYSEQK True H1975_Epitope_Rep1 1421.7150578868498 1421.7134249037902 29.688 3 -1.2359457663606168 0.37659333628623454 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2'] 24942 5159 FCMQCWSEY True H1975_Epitope_Rep2 1195.4136735590298 1195.41202490379 24.921 3 -1.2360198750063658 0.3766193821434283 1.0 ['ENSG00000166233|ENST00000379887|ARIH1'] 12166 13211 DIENVQHVI True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 55.851 2 -1.2360209359627943 0.3766193821434283 1.0 ['nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 121783 6994 VFPAAPGP True NCI_RA007_Epitope_Rep5 754.4013753462199 754.40026993586 33.583 2 -1.2360512716950216 0.3766193821434283 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 124288 14839 VGTNGGLK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 63.748 1 -1.2360583975411603 0.3766193821434283 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 60918 13887 LIAINTFTTI True NCI_RA007_Epitope_Rep3 1105.6383111362902 1105.63720993586 61.946 2 -1.2361328846451343 0.3766193821434283 1.0 ['ENSG00000203733|ENST00000450456|GJE1'] 12143 8197 DIDVSGPS True PC9_epitope_Rep6 788.35521299944 788.35466496793 41.102 1 -1.2362303570028235 0.3766361578584785 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 25395 9959 FEDDEESTIY True PC9_epitope_Rep3 1246.48774329062 1246.4866499358602 43.261 2 -1.2362551376163822 0.3766361578584785 1.0 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38'] 130156 14168 VSDVRELVP True PC9_epitope_Rep2 1012.5553097883198 1012.55420993586 59.766 2 -1.2363511280895187 0.3766361578584785 1.0 ['ENSG00000126749|ENST00000599672|EMG1'] 19924 13058 ELVELQRWP True PC9_epitope_Rep3 1168.6240580544797 1168.62296993586 55.254 2 -1.23637888842023 0.3766361578584785 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 124656 11606 VGYAVHDNWI True PC9_epitope_Rep1 1172.5614577979197 1172.55982490379 49.521 3 -1.2363798999854694 0.3766361578584785 1.0 ['ENSG00000157184|ENST00000371486|CPT2'] 56916 7450 LDQEKVSSVFY True NCI_RA007_Epitope_Rep1 1313.6503323719699 1313.6492299358601 32.976 2 -1.2363845294683988 0.3766361578584785 1.0 ['ENSG00000196341|ENST00000641015|OR8D1'] 22142 8331 ESRTTGPSVL True NCI_RA007_Epitope_Rep5 1045.54038800017 1045.53928993586 38.72 2 -1.2363870909506058 0.3766361578584785 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 82715 16600 PQYLLHSLW True PC9_epitope_Rep5 1155.60767971435 1155.60658993586 68.857 2 -1.2364009029865972 0.37664526287302874 1.0 ['ENST00000485149.1_1_1:109856516-109859516:-|nuORF'] 23241 12878 EVNKKKMEEKQ True PC9_epitope_Rep1 1389.7285997760098 1389.72694490379 54.408 3 -1.2364432798435767 0.37664526287302874 1.0 ['ENSG00000146007|ENST00000274712|ZMAT2', 'ENST00000506644.3_1_5:140083564-140085338:+|nuORF'] 37814 9034 GYGGGSGK True H1975_Epitope_Rep1 681.30820323737 681.30765496793 39.656 1 -1.236642924468379 0.37664526287302874 1.0 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 22616 17599 ETLRYKDRRL True NCI_RA007_Epitope_Rep2 1348.7575318355198 1348.75642993586 73.195 2 -1.236695266428273 0.37664526287302874 1.0 ['nc|ENSG00000168959|P41594-3|GRM5', 'ENSG00000168959|ENST00000305447|GRM5'] 28834 10960 FSYELSKVEG True H1975_Epitope_Rep1 1157.5604547384098 1157.5593499358602 47.122 2 -1.2367028815438905 0.37664526287302874 1.0 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 15844 8145 EDEVNQDSVKK True NCI_RA007_Epitope_Rep2 1289.6099241119698 1289.60882993586 36.317 2 -1.2367248391938883 0.37664526287302874 1.0 ['ENSG00000163807|ENST00000296121|KIAA1143', 'ENST00000484437.1_1_3:44779222-44795794:-|nuORF'] 59388 18604 LFLLFWFR True NCI_RA007_Epitope_Rep5 1140.64842232752 1140.6473299358602 78.373 2 -1.2368438653717801 0.37666666666666665 1.0 ['ENSG00000181652|ENST00000639579|ATG9B', 'nc|ENSG00000181652|Q674R7-2|ATG9B'] 49651 23295 KGKKKRTRKK True NCI_RA007_Epitope_Rep4 1256.85170700388 1256.8506099358601 101.16 2 -1.2369077256072498 0.37666666666666665 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant'] 120849 17252 VELRRQHSLN True NCI_RA007_Epitope_Rep1 1250.68436689526 1250.6832699358602 71.237 2 -1.2369452848789833 0.37666666666666665 1.0 ['ENST00000553597.5_1_15:25165166-25166312:+|nuORF'] 124289 15287 VGTNGGLK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 65.496 1 -1.2369459255296344 0.37666666666666665 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 4913 5689 ALFSFTVKWLR True NCI_RA007_Epitope_Rep5 1366.7761420217798 1366.77448490379 28.571 3 -1.2369527192283285 0.37666666666666665 1.0 ['nc|ENSG00000259024|Q96ET8|TVP23C'] 85092 11387 QEKSEKPQKRP True H1975_Epitope_Rep1 1353.7364620377698 1353.73536993586 48.779 2 -1.237046775378252 0.37666666666666665 1.0 ['ENSG00000108510|ENST00000397786|MED13'] 1749 8299 AEGRAVYVVDD True H1975_Epitope_Rep3 1192.5724164044398 1192.5713099358602 36.906 2 -1.2371414679602881 0.37670660008363877 1.0 ['ENSG00000198841|ENST00000371614|KTI12'] 41850 9697 IAWRTPEPVP True H1975_Epitope_Rep2 1164.6291434349198 1164.6280499358602 42.282 2 -1.2371509023412748 0.37670660008363877 1.0 ['IGFLR1|p.F298Lfs*5|1|0.54|ENSG00000126246|chr19:35739457-35739457|G/-|frameshift_variant', 'ENSG00000126246|ENST00000246532|IGFLR1'] 82906 17113 PSALARALTWR True PC9_epitope_Rep6 1240.70403971068 1240.70294993586 78.401 2 -1.2373110550041444 0.3767511653936509 1.0 ['ENSG00000179921|ENST00000519574|GPBAR1'] 87655 7013 QQRVEEAPLKK True NCI_RA007_Epitope_Rep5 1324.7462984454799 1324.7446649037902 33.655 3 -1.2375114792363795 0.3768941257502706 1.0 ['BOD1L1|p.V3046L|1|0.47|ENSG00000038219|chr4:13570031-13570031|C/A|missense_variant'] 23434 8378 EVTEFYVQNEN True H1975_Epitope_Rep2 1370.5990250750995 1370.59792993586 37.179 2 -1.2375995385942777 0.3769217523921974 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 37025 14764 GVPDRMAL True PC9_epitope_Rep2 857.4429228883699 857.44182993586 62.055 2 -1.2376231601597443 0.3769217523921974 1.0 ['nc|ENSG00000158966|Q5VU97-2|CACHD1', 'ENSG00000158966|ENST00000651257|CACHD1'] 15482 9432 EALRLSPVP True PC9_epitope_Rep1 980.5654805492 980.56438993586 41.138 2 -1.2376672374038564 0.3769294156714674 1.0 ['ENSG00000176723|ENST00000315678|ZNF843'] 36401 19239 GVFLPAGI True PC9_epitope_Rep5 772.4483255386399 772.44722993586 79.042 2 -1.2377024861116792 0.3769370787622374 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 12159 9312 DIEIHMLAPE True H1975_Epitope_Rep1 1166.56416021986 1166.56306993586 40.725 2 -1.2378348828871313 0.3769570404260291 1.0 ['ENST00000568170.1_1_16:66544905-66545152:-|nuORF'] 13472 23881 DNGNTNAN True H1975_Epitope_Rep3 818.3154734457801 818.3149249679301 99.572 1 -1.2378525448395754 0.376960066903617 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 15194 11197 EACMLVFQP True H1975_Epitope_Rep1 1036.4721744113199 1036.4710699358602 48.038 2 -1.2378843858942141 0.376960066903617 1.0 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.L1225Ffs*5|1|0.18|ENSG00000102699|chr13:24435466-24435467|-/A|frameshift_variant'] 85549 6442 QGEGEEAMKDM True NCI_RA007_Epitope_Rep5 1223.47983854255 1223.4781949037902 31.447 3 -1.237951209048065 0.3769923258559622 1.0 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.G1552Hfs*13|1|0.14|ENSG00000151320|chr14:32822467-32822468|GG/-|frameshift_variant', 'AKAP6|p.P544Hfs*88|1|0.88|ENSG00000151320|chr14:32546283-32546283|C/-|frameshift_variant', 'nc|ENSG00000151320|Q13023-2|AKAP6', 'AKAP6|p.D1399Tfs*11|1|0.37|ENSG00000151320|chr14:32822007-32822007|G/-|frameshift_variant', 'ENST00000556037.1_1_14:32902699-32903038:+|nuORF', 'ENST00000554449.1_1_14:32902699-32907897:+|nuORF'] 117661 19683 TVTRLIYAF True PC9_epitope_Rep2 1082.6124307416198 1082.61132993586 81.097 2 -1.237968197908994 0.37700764935927394 1.0 ['ENSG00000132824|ENST00000342374|SERINC3'] 59460 17958 LFPYFIPL True H1975_Epitope_Rep3 1008.5684406713199 1008.56734993586 75.219 2 -1.2380498672223452 0.37700764935927394 1.0 ['nc|ENSG00000102312|Q9H237-5|PORCN', 'nc|ENSG00000102312|Q9H237-4|PORCN', 'nc|ENSG00000102312|Q9H237-3|PORCN', 'nc|ENSG00000102312|Q9H237-2|PORCN', 'ENST00000485288.6_1_X:48368107-48378861:+|nuORF', 'ENSG00000102312|ENST00000326194|PORCN'] 12867 16661 DLHQDLVL True PC9_epitope_Rep3 951.50254593947 951.50144993586 69.223 2 -1.2380688591598688 0.37701531082826045 1.0 ['ENST00000469141.6_1_1:36748189-36748300:+|nuORF'] 63063 16857 LLQEYYKIFME True H1975_Epitope_Rep3 1475.7370392013902 1475.7359499358602 70.392 2 -1.2381344234597396 0.3770229721088101 1.0 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B'] 14848 7257 DVVMASLLRMF True NCI_RA007_Epitope_Rep1 1280.6621004393198 1280.66044490379 32.218 3 -1.238187775693378 0.3770382941046263 1.0 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1', 'KPNB1|p.K729Nfs*6|1|0.22|ENSG00000108424|chr17:47678111-47678112|-/ATTGGAGGAGAGTTTA|frameshift_variant'] 102674 8700 SLYLSSAEHPG True NCI_RA007_Epitope_Rep1 1159.5509526838698 1159.54984993586 37.842 2 -1.2381941799383076 0.3770382941046263 1.0 ['nc|ENSG00000187098|O75030-8|MITF', 'nc|ENSG00000187098|O75030-7|MITF'] 36927 20441 GVLRHLQVIF True PC9_epitope_Rep4 1180.7080624619598 1180.7069699358601 86.772 2 -1.2386657595150505 0.37716731019896216 1.0 ['nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'USP9Y|p.W2351Cfs*39|1|0.47|ENSG00000114374|chrY:12847315-12847315|G/-|frameshift_variant', 'ENSG00000114374|ENST00000338981|USP9Y', 'USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 109240 7555 TARSGLPSI True PC9_epitope_Rep6 900.5028802926399 900.50178993586 38.333 2 -1.2386867634408947 0.37716731019896216 1.0 ['ENST00000487949.4_1_1:6531427-6531640:-|nuORF'] 70012 23747 LVMCIVLRP True NCI_RA007_Epitope_Rep4 1042.6031290112198 1042.6020299358602 102.96 2 -1.2386956916857146 0.37716731019896216 1.0 ['ENSG00000078098|ENST00000188790|FAP', 'ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'FAP|p.S363Qfs*38|1|0.1|ENSG00000078098|chr2:162203073-162203107|AGCCATCCTTGTCACTAAATATTTTGTAGTACGAA/-|frameshift_variant'] 57078 11639 LDSLEELEP True PC9_epitope_Rep2 1043.50227115595 1043.5011699358602 50.096 2 -1.2387489523142081 0.37716731019896216 1.0 ['RAD18|p.P410L|1|0.59|ENSG00000070950|chr3:8898987-8898987|G/A|missense_variant'] 26657 13513 FIQSSQQYQV True PC9_epitope_Rep3 1226.5931518490202 1226.59150490379 57.027 3 -1.2387752476121185 0.3771733516956447 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF'] 67463 8349 LSSRTEAVSP True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 37.084 2 -1.2388040906440276 0.3771733516956447 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 107870 21001 SVVKQDRLLG True PC9_epitope_Rep6 1113.6506071554898 1113.6495099358601 93.605 2 -1.238813224790615 0.3771733516956447 1.0 ['ENSG00000164951|ENST00000297598|PDP1', 'nc|ENSG00000164951|Q9P0J1-2|PDP1'] 39767 6907 HLVTCFPHPV True NCI_RA007_Epitope_Rep3 1148.58008506752 1148.5789899358601 34.273 2 -1.2388663084697116 0.3771733516956447 1.0 ['nc|ENSG00000146112|Q6NYC8-2|PPP1R18', 'ENST00000399199.7_1_6:30644834-30644957:-|nuORF'] 12657 12057 DLDIPSGFQMV True PC9_epitope_Rep5 1220.57472490356 1220.57308490379 51.373 3 -1.2389018050962457 0.37717637222112926 1.0 ['ENST00000016171.5_1_10:101474196-101474316:-|nuORF'] 45496 5829 IQNERTYEVPD True H1975_Epitope_Rep2 1362.6415585934199 1362.6404699358602 27.412 2 -1.2389390061273922 0.37717637222112926 1.0 ['nc|ENSG00000112782|Q9NZA1|CLIC5'] 127837 8548 VPFADFSHL True PC9_epitope_Rep2 1031.50763131991 1031.50652993586 38.241 2 -1.2389861137922615 0.37719168818394194 1.0 ['ENST00000253413.9_1_22:18111444-18111552:-|nuORF'] 17959 10088 EIDAKYQEILK True NCI_RA007_Epitope_Rep1 1348.7238316654 1348.7227299358601 43.249 2 -1.2389901605782023 0.37719168818394194 1.0 ['ENSG00000153487|ENST00000333219|ING1'] 15843 13683 EDETDGEQR True PC9_epitope_Rep1 1077.42106071313 1077.41996993586 57.485 2 -1.2390600803522946 0.3772070033934983 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'CACNA1A|p.N640Ifs*18|1|0.86|ENSG00000141837|chr19:13307849-13307849|T/-|frameshift_variant'] 62818 10596 LLLVVILIVKK True PC9_epitope_Rep5 1249.9101163134499 1249.90900993586 45.746 2 -1.2390791652640754 0.3772070033934983 1.0 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF', 'ENST00000531050.5_1_6:128321419-128718758:-|nuORF', 'nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK', 'PTPRK|p.Y967*|1|0.09|ENSG00000152894|chr6:127991374-127991375|CT/-|frameshift_variant'] 8333 5825 ATIRYGRP True H1975_Epitope_Rep3 932.5191990631199 932.51810993586 27.426 2 -1.239136727664765 0.3772084045391396 1.0 ['ENST00000507485.1_1_4:152024029-152024173:+|nuORF'] 105987 14515 SSTQLFENV True PC9_epitope_Rep1 1023.48728979815 1023.4861899358599 60.656 2 -1.2391378463730216 0.3772084045391396 1.0 ['KCNIP3|p.M249T|1|0.32|ENSG00000115041|chr2:95384024-95384024|T/C|missense_variant'] 136262 4444 WRWVWSWEWAR True NCI_RA007_Epitope_Rep4 1646.7895006701401 1646.78785490379 23.463 3 -1.2391473972904434 0.3772084045391396 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 74516 14437 NFINTNAADI True PC9_epitope_Rep2 1091.52473793603 1091.52364993586 60.8 2 -1.2391608934194458 0.3772084045391396 1.0 ['ENSG00000151023|ENST00000331161|ENKUR'] 21032 7308 EQSTGPIK True PC9_epitope_Rep1 858.44469671018 858.44358993586 32.923 2 -1.2391745520477755 0.3772084045391396 1.0 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1'] 55508 7787 LAGLEAHT True PC9_epitope_Rep5 810.4235673427801 810.42246993586 34.898 2 -1.239207331449143 0.37722209928450245 1.0 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A'] 20764 5923 EQFYDFFRYVE True NCI_RA007_Epitope_Rep2 1541.68269512941 1541.68158993586 27.65 2 -1.239242025664576 0.37722209928450245 1.0 ['ENSG00000135932|ENST00000258418|CAB39', 'ENST00000478152.1_1_2:231655619-231663633:+|nuORF'] 124127 6247 VGSQPSVF True PC9_epitope_Rep4 819.41266830591 819.41156993586 31.075 2 -1.239264566431465 0.37722209928450245 1.0 ['PTPN21|p.D800Vfs*50|1|0.07|ENSG00000070778|chr14:88479022-88479032|CGTGGTGAGGT/-|frameshift_variant', 'ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 65880 20173 LSDNDRSLLE True PC9_epitope_Rep4 1160.567331024 1160.56622993586 85.732 2 -1.239280101530681 0.37722209928450245 1.0 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'ENST00000570306.5_1_17:19284999-19286541:+|nuORF'] 122690 20830 VGGGGGHA True PC9_epitope_Rep4 610.2823228427 610.28177496793 88.273 1 -1.2392844488222532 0.37722209928450245 1.0 ['TBC1D24|p.Q514H|1|0.3|ENSG00000162065|chr16:2500820-2500820|G/C|missense_variant'] 68960 14995 LTPEMLMR True PC9_epitope_Rep1 989.5038088927699 989.50270993586 62.498 2 -1.2393004361564333 0.3772251180173092 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 13286 13175 DLTEYRQVL True PC9_epitope_Rep4 1135.58733819259 1135.58624993586 58.575 2 -1.2393281324026098 0.3772251180173092 1.0 ['ENSG00000167306|ENST00000285039|MYO5B', 'nc|ENSG00000167306|Q9ULV0-2|MYO5B', 'nc|ENSG00000167306|Q9ULV0-3|MYO5B', 'ENST00000431872.1_1_9:68357853-68358255:-|nuORF'] 55834 7376 LAPLCWPP True NCI_RA007_Epitope_Rep2 895.4625957037899 895.4620449679301 33.315 1 -1.239366310160465 0.37722651784287453 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 22540 3928 ETHIRVPA True PC9_epitope_Rep6 921.50321464581 921.50210993586 21.801 2 -1.2394008827576177 0.37722651784287453 1.0 ['nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 32442 21322 GFVHRIPP True PC9_epitope_Rep3 921.5184707871299 921.51736993586 87.309 2 -1.2394015298017873 0.37722651784287453 1.0 ['ENSG00000105198|ENST00000221797|LGALS13'] 28208 19937 FREHIQRRHRF True PC9_epitope_Rep5 1580.8548948913597 1580.85325490379 81.742 3 -1.2394443427659045 0.37722651784287453 1.0 ['ENSG00000124226|ENST00000244061|RNF114'] 113774 12566 TMNTTCVDRFI True H1975_Epitope_Rep1 1299.59514307831 1299.59350490379 53.381 3 -1.2395111676405455 0.37722651784287453 1.0 ['ENSG00000136937|ENST00000375147|NCBP1'] 101529 13862 SLLFLEWEIKH True H1975_Epitope_Rep3 1413.76563690773 1413.76452993586 58.63 2 -1.2395942850938064 0.3772295362072992 1.0 ['chr7:17482733-17483406|443|19.48|0.84|4.53|-|0|LINC02889,LINC02889|1'] 122633 13730 VGFVHYLRF True NCI_RA007_Epitope_Rep4 1136.6130994479597 1136.6120099358602 60.037 2 -1.23960732608149 0.3772295362072992 1.0 ['ENSG00000072858|ENST00000264852|SIDT1', 'nc|ENSG00000072858|Q9NXL6-2|SIDT1', 'ENST00000488390.1_1_3:113303591-113320529:+|nuORF'] 109770 6490 TEDRPTPPP True H1975_Epitope_Rep2 1008.4876241513199 1008.48652993586 29.88 2 -1.239646943102251 0.37724484653301044 1.0 ['RP1L1|p.P2273T|1|0.5|ENSG00000183638|chr8:10607281-10607281|G/T|missense_variant'] 5455 18419 ALVPDELLK True NCI_RA007_Epitope_Rep2 996.5855472874399 996.58499496793 76.413 1 -1.2396474226455594 0.37724484653301044 1.0 ['ENSG00000086015|ENST00000361297|MAST2', 'nc|ENSG00000086015|Q6P0Q8-2|MAST2'] 60359 8471 LGSSTKQLK True H1975_Epitope_Rep1 960.56039516876 960.55928993586 37.514 2 -1.2397251205494726 0.37726479337217594 1.0 ['chr7:93591771-93807204|183|24.8|0.17|7.2|+|2|GNGT1,None|1'] 124292 21075 VGTNGGLK True PC9_epitope_Rep3 744.41300265908 744.4124549679301 86.347 1 -1.2397649624337908 0.3772724479134657 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 125955 10492 VLDFGRPI True PC9_epitope_Rep5 915.5178020807899 915.51670993586 45.343 2 -1.239811257206135 0.37728010226658143 1.0 ['ENST00000569336.2_2_15:68510846-68510915:-|nuORF', 'ENSG00000128973|ENST00000249806|CLN6', 'nc|ENSG00000128973|Q9NWW5-2|CLN6'] 87133 20940 QPALVLAQVP True PC9_epitope_Rep2 1034.6124307416198 1034.61132993586 85.993 2 -1.2400343732763104 0.3773077017625802 1.0 ['ENSG00000004779|ENST00000007516|NDUFAB1'] 136095 14959 WRLLGLGV True NCI_RA007_Epitope_Rep4 912.5545219426798 912.55342993586 65.003 2 -1.240043989742986 0.3773077017625802 1.0 ['ENST00000445174.5_1_2:216480087-216485873:-|nuORF'] 31124 9313 GAVPTLHRVP True H1975_Epitope_Rep3 1045.60326304025 1045.60216993586 40.817 2 -1.2400893264404427 0.37731071779744346 1.0 ['ENSG00000129028|ENST00000249861|THAP10'] 116111 17325 TSSDPPSWV True PC9_epitope_Rep5 974.4345259493 974.43342993586 71.639 2 -1.2401152563742674 0.37731071779744346 1.0 ['ENST00000439321.1_1_2:122407632-122408176:+|nuORF'] 62552 17848 LLKKESQNL True PC9_epitope_Rep4 1071.62880908175 1071.6277099358601 76.689 2 -1.2401295711879439 0.37731674942234894 1.0 ['ENSG00000164744|ENST00000297325|SUN3', 'nc|ENSG00000164744|Q8TAQ9-2|SUN3', 'nc|ENSG00000164744|Q8TAQ9-3|SUN3'] 137317 5559 YDFPKEYFEEQ True NCI_RA007_Epitope_Rep1 1493.63507623065 1493.63396993586 25.693 2 -1.2401860252411125 0.37731674942234894 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 77471 10863 NSYSADVK True PC9_epitope_Rep1 882.4083112014599 882.40720993586 46.671 2 -1.2401950935814086 0.37731674942234894 1.0 ['ENST00000534843.1_1_12:12982539-12982698:+|nuORF'] 69339 9992 LTVLEPMEKPI True NCI_RA007_Epitope_Rep1 1268.70501079712 1268.70390993586 42.872 2 -1.240246345717007 0.37731674942234894 1.0 ['ENSG00000101825|ENST00000217939|MXRA5'] 80097 22391 PFLTHYRF True PC9_epitope_Rep2 1079.55525021867 1079.55467496793 91.621 1 -1.240287877686263 0.3773211586437429 1.0 ['ADAMTS20|p.R77L|1|0.24|ENSG00000173157|chr12:43551132-43551132|C/A|missense_variant'] 130035 14156 VSASEAEERP True PC9_epitope_Rep6 1073.4989171110099 1073.4978299358602 66.32 2 -1.2403101466251827 0.3773211586437429 1.0 ['ENSG00000253797|ENST00000521776|UTP14C'] 124096 13219 VGSNVPFL True H1975_Epitope_Rep2 831.4490538146299 831.44850496793 55.976 1 -1.2403146945623567 0.3773211586437429 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B', 'CC2D2B|p.A87Vfs*6|1|0.09|ENSG00000188649|chr10:96012670-96012671|-/TTTATTTTTGC|frameshift_variant', 'CC2D2B|p.A87Nfs*19|1|0.09|ENSG00000188649|chr10:96012669-96012670|-/AACCAAT|frameshift_variant'] 109388 7975 TDALLPASRPA True H1975_Epitope_Rep3 1110.6033226099 1110.6022299358601 35.648 2 -1.2403177822813918 0.3773211586437429 1.0 ['ENST00000563394.1_1_17:42299806-42300223:+|nuORF'] 90961 7389 REYVRMYHSWQ True H1975_Epitope_Rep1 1553.7197664278099 1553.7186699358601 33.426 2 -1.2403812531554586 0.3773211586437429 1.0 ['nc|ENSG00000151948|Q96MS3-2|GLT1D1', 'ENSG00000151948|ENST00000442111|GLT1D1'] 80830 10034 PHPPTALTG True H1975_Epitope_Rep3 889.46576650793 889.46466993586 43.631 2 -1.2403914887820144 0.3773211586437429 1.0 ['ENST00000352681.7_2_16:727083-728243:+|nuORF'] 58999 14751 LEVKLGKRP True H1975_Epitope_Rep2 1038.6549642599398 1038.65386993586 61.9 2 -1.2404197031253308 0.3773211586437429 1.0 ['ENSG00000140044|ENST00000651602|JDP2', 'nc|ENSG00000140044|Q8WYK2-2|JDP2'] 63359 10472 LLTSEARVA True PC9_epitope_Rep5 958.5447451046199 958.54364993586 45.266 2 -1.2405475791306972 0.3773302038659572 1.0 ['ENST00000372797.7_2_1:40537598-40537793:+|nuORF'] 131931 9976 VTRSVSVP True PC9_epitope_Rep1 843.48141657207 843.48030993586 43.238 2 -1.240572836591054 0.3773302038659572 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000482952.5_1_2:233671364-233680450:+|nuORF'] 69337 15883 LTVLCMPGVI True PC9_epitope_Rep4 1044.5711601766 1044.5700699358601 69.025 2 -1.2405814278467515 0.3773302038659572 1.0 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9'] 119885 20898 VDGQRSRSG True NCI_RA007_Epitope_Rep5 960.4737054226799 960.47260993586 87.381 2 -1.2407070098426882 0.3773302038659572 1.0 ['ENST00000381356.8_1_12:25348171-25356891:+|nuORF'] 124242 26765 VGTGQKTT True H1975_Epitope_Rep1 790.41848196234 790.41738993586 111.47 2 -1.2407161688508686 0.3773302038659572 1.0 ['ENST00000347708.4_1_8:145194626-145194866:+|nuORF'] 136094 14173 WRLLGLGV True NCI_RA007_Epitope_Rep4 912.5545219426798 912.55342993586 61.796 2 -1.2407451861032313 0.3773302038659572 1.0 ['ENST00000445174.5_1_2:216480087-216485873:-|nuORF'] 27401 13970 FLVYCILRF True PC9_epitope_Rep1 1172.6416226949198 1172.63998490379 58.574 3 -1.2407962864846265 0.3773378554400452 1.0 ['ENSG00000197658|ENST00000612278|SLC22A24', 'nc|ENSG00000197658|Q8N4F4-3|SLC22A24', 'nc|ENSG00000197658|Q8N4F4-1|SLC22A24'] 41694 13844 IAHLRCGIYF True H1975_Epitope_Rep1 1191.62228423267 1191.62118993586 58.397 2 -1.2408699147723834 0.3773577950085403 1.0 ['ENST00000265022.7_1_3:185867058-185867445:-|nuORF'] 134958 14479 WARSWQVYNP True H1975_Epitope_Rep2 1305.6254550368096 1305.6243499358602 60.85 2 -1.241004607712794 0.3773608090340497 1.0 ['ENST00000578492.5_1_17:62776963-62777681:-|nuORF'] 45657 10266 IREQWWRWNRW True H1975_Epitope_Rep1 1714.8593115654596 1714.85820993586 44.432 2 -1.2410436918431274 0.3773608090340497 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 83774 25497 PVKAAAAAAAA True PC9_epitope_Rep2 910.5236157372198 910.52250993586 103.76 2 -1.2411167935391716 0.37736382291141884 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 63060 16017 LLQETKEL True PC9_epitope_Rep2 972.54916177872 972.54806993586 66.864 2 -1.2411284875048054 0.37736382291141884 1.0 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 76099 195 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 1.0681 3 -1.2412433288706926 0.37742062321832304 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 100774 9989 SLEEAWPLHG True H1975_Epitope_Rep1 1137.5454733806098 1137.54436993586 43.357 2 -1.2412742916822137 0.3774482097658074 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 64033 13477 LPAIAKQI True PC9_epitope_Rep1 852.54328855264 852.54218993586 56.696 2 -1.2413048569046432 0.3774482097658074 1.0 ['ENST00000474436.1_1_9:35090976-35092764:-|nuORF'] 34272 15479 GNTLTSLK True NCI_RA007_Epitope_Rep3 832.46543215476 832.46432993586 68.446 2 -1.2413425816179398 0.3774558590438276 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 125427 11434 VITFLFLIEH True NCI_RA007_Epitope_Rep1 1230.70124574602 1230.70014993586 48.441 2 -1.2414642438717716 0.37746350813387725 1.0 ['ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'nc|ENSG00000134955|Q8TED4-3|SLC37A2', 'ENST00000526405.5_1_11:124933263-124955028:+|nuORF'] 40025 13049 HPSLLLTLVY True PC9_epitope_Rep1 1154.66994561774 1154.6683049037902 55.061 3 -1.2415227683474352 0.37747115703596307 1.0 ['ENST00000263150.8_1_10:1142124-1149563:+|nuORF'] 97191 15808 SDWRDLPNIE True PC9_epitope_Rep5 1243.58331544131 1243.5816749037901 65.795 3 -1.2415750198485407 0.3775033787934636 1.0 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'nc|ENSG00000130816|P26358-3|DNMT1', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 41569 8962 HYVYMFLVKW True H1975_Epitope_Rep3 1384.7002002002 1384.6991099358602 39.467 2 -1.2416102056739708 0.3775233133884582 1.0 ['ENSG00000158517|ENST00000289473|NCF1', 'ENST00000398421.6_1_7:74188378-74193456:+|nuORF', 'nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF'] 11531 18764 DFNDFIRRRFW True NCI_RA007_Epitope_Rep1 1570.77932990926 1570.77822993586 77.129 2 -1.2417139311600032 0.37756781993316296 1.0 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ODF2|p.L363Cfs*26|1|0.5|ENSG00000136811|chr9:128484036-128484036|C/-|frameshift_variant', 'ENST00000444993.6_1_9:131218472-131219504:+|nuORF'] 127362 7141 VMVHFDLPQQE True H1975_Epitope_Rep3 1341.63872214245 1341.63762993586 32.441 2 -1.2418060591391058 0.3775954001523454 1.0 ['nc|ENSG00000160072|Q5T9A4-3|ATAD3B', 'ENST00000472194.6_1_1:1413873-1431194:+|nuORF', 'ENSG00000160072|ENST00000673477|ATAD3B', 'ENST00000474481.1_1_1:1425595-1425805:+|nuORF'] 17725 9104 EHQKKVRKM True H1975_Epitope_Rep2 1182.6655460269797 1182.66391490379 39.971 3 -1.2418204120350298 0.3775954001523454 1.0 ['EID3|p.R185Q|1|0.29|ENSG00000255150|chr12:104304488-104304488|G/A|missense_variant', 'ENSG00000255150|ENST00000527879|EID3'] 133662 13084 VYAPALAL True NCI_RA007_Epitope_Rep5 816.47454028648 816.47344993586 57.005 2 -1.241861117819128 0.37760304687020085 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12', 'nc|ENSG00000148942|Q1EHB4-2|SLC5A12'] 37332 9331 GVSERDLK True PC9_epitope_Rep3 902.4821448480599 902.48104993586 40.831 2 -1.2419730525845334 0.3776213466995909 1.0 ['ENSG00000145423|ENST00000274063|SFRP2'] 58717 2610 LERSLVSK True NCI_RA007_Epitope_Rep5 930.5498304850599 930.54872993586 14.74 2 -1.2420981166395613 0.3776213466995909 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|9|1|sense'] 113714 11660 TLYRNPQI True PC9_epitope_Rep1 1003.5450794577898 1003.5439899358599 49.728 2 -1.2420997628270551 0.3776213466995909 1.0 ['ENST00000357552.7_2_20:58439192-58439324:-|nuORF'] 127781 6124 VPDPSVPAP True PC9_epitope_Rep2 877.4545331178899 877.45342993586 28.95 2 -1.2421128259705132 0.3776213466995909 1.0 ['ENST00000488671.1_1_2:111144305-111181647:-|nuORF', 'ENST00000606848.1_1_2:111144305-111145031:-|nuORF'] 46976 14182 ITPTDPIDR True H1975_Epitope_Rep1 1026.53457434374 1026.53346993586 59.726 2 -1.242218642200265 0.3776642138496124 1.0 ['ACACB|p.R2183Dfs*8|1|0.32|ENSG00000076555|chr12:109260528-109260528|T/-|frameshift_variant', 'nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB'] 92498 4745 RLWRPRPWVFG True PC9_epitope_Rep1 1468.8204068755997 1468.81876490379 23.121 3 -1.2422673561815578 0.3776642138496124 1.0 ['MLNR|p.S101P|1|0.78|ENSG00000102539|chr13:49220638-49220638|T/C|missense_variant'] 27111 14626 FLHLLFPSL True PC9_epitope_Rep3 1085.62735252977 1085.6262499358602 61.39 2 -1.2423338687886596 0.3776642138496124 1.0 ['ENST00000528443.6_1_1:179888013-179888181:+|nuORF'] 66691 17489 LSLDDRVLS True PC9_epitope_Rep3 1016.55022440788 1016.54912993586 72.448 2 -1.2423387986073442 0.3776642138496124 1.0 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF', 'ENST00000543355.5_1_12:121017699-121019165:-|nuORF', 'ENST00000539716.1_1_12:121018789-121019198:-|nuORF', 'nc|ENSG00000167272|Q969H6-2|POP5'] 82694 4909 PQSWSSLWKHD True PC9_epitope_Rep5 1369.64149902377 1369.6398449037902 23.924 3 -1.2423970075689228 0.37767950371598796 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 96761 10317 SAPAFNSI True PC9_epitope_Rep5 805.39701824177 805.39592993586 44.67 2 -1.242411257815811 0.37767950371598796 1.0 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 42713 12742 IEKRLISP True NCI_RA007_Epitope_Rep4 954.5862159937799 954.58510993586 56.07 2 -1.2424245456984224 0.37768250887515814 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 56529 5809 LDGAPPLP True NCI_RA007_Epitope_Rep2 778.42250471362 778.42140993586 27.214 2 -1.242483260869088 0.37768250887515814 1.0 ['ENST00000228606.8_1_12:58158304-58160873:-|nuORF', 'ENST00000547344.5_1_12:58159078-58160873:-|nuORF'] 91780 25569 RKGHIVIKD True PC9_epitope_Rep1 1064.6454622054 1064.6443699358601 103.36 2 -1.2425322918580712 0.377685513886671 1.0 ['ENST00000514179.5_1_5:130834202-130867847:-|nuORF'] 69824 6575 LVGQSGGGK True NCI_RA007_Epitope_Rep2 801.4344663796498 801.43336993586 30.189 2 -1.2426045560774732 0.377685513886671 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'ENST00000482899.1_1_7:150737654-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 87077 8442 QNKNKLGAL True PC9_epitope_Rep6 984.5716285587998 984.57052993586 42.167 2 -1.2426250410820756 0.3777008021029099 1.0 ['ENST00000433480.2_1_13:48876566-48877550:-|nuORF'] 81432 6851 PLESRQQM True PC9_epitope_Rep2 987.4807649490699 987.47966993586 31.756 2 -1.2426272130818767 0.3777008021029099 1.0 ['nc|ENSG00000205268|Q13946-3|PDE7A', 'nc|ENSG00000205268|Q13946-2|PDE7A', 'ENSG00000205268|ENST00000401827|PDE7A'] 84110 22973 PWRRRRRSPR True PC9_epitope_Rep4 1421.8340998771298 1421.83246490379 96.586 3 -1.2426341237417675 0.37770844592934705 1.0 ['ENST00000358625.3_1_9:137004970-137005837:+|nuORF'] 128509 9571 VPSQPPAA True PC9_epitope_Rep5 765.4021036222099 765.40100993586 41.775 2 -1.24268650418148 0.37776522177047894 1.0 ['ENSG00000128709|ENST00000249499|HOXD9', 'HOXD9|p.S80Y|1|0.47|ENSG00000128709|chr2:176123007-176123007|C/A|missense_variant'] 60258 6049 LGRFLPCHAVP True H1975_Epitope_Rep1 1208.6488333336797 1208.64772993586 28.339 2 -1.242811241865242 0.37780343413004497 1.0 ['HTR6|p.P338Hfs*116|1|0.31|ENSG00000158748|chr1:19679057-19679057|C/-|frameshift_variant'] 59212 11394 LFEFDTRVNP True H1975_Epitope_Rep2 1236.6138872935999 1236.61278993586 48.876 2 -1.2428351934001716 0.37780343413004497 1.0 ['ENST00000502774.1_1_4:154579740-154580577:+|nuORF'] 29450 14186 FVEKSGYRF True PC9_epitope_Rep3 1131.57129420563 1131.56965490379 59.652 3 -1.242867088104994 0.37780343413004497 1.0 ['ASB17|p.P275Qfs*8|1|0.1|ENSG00000154007|chr1:75919016-75919016|G/-|frameshift_variant', 'ENSG00000154007|ENST00000284142|ASB17'] 99996 10500 SIPSCDLSGF True H1975_Epitope_Rep2 1024.4535471417198 1024.4524499358602 45.406 2 -1.242928067510849 0.37780343413004497 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 110520 11207 TFKEWFWL True PC9_epitope_Rep6 1155.5753169569098 1155.5742099358602 54.086 2 -1.2429383969246597 0.37780343413004497 1.0 ['CERS3|p.A61Gfs*11|1|0.35|ENSG00000154227|chr15:100490923-100490924|-/C|frameshift_variant', 'CERS3|p.T232Pfs*3|1|0.17|ENSG00000154227|chr15:100472969-100472969|C/-|frameshift_variant', 'ENSG00000154227|ENST00000679737|CERS3'] 7641 20588 ASHLFTLTV True PC9_epitope_Rep5 987.53893144819 987.53782993586 84.239 2 -1.2430616264298708 0.37780643576516826 1.0 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 19557 19208 ELQDEEEAKIK True H1975_Epitope_Rep3 1330.66162533166 1330.66052993586 80.538 2 -1.2430936113839053 0.37780643576516826 1.0 ['ENST00000398689.2_1_10:76415232-76415652:+|nuORF'] 3351 6283 AGGQEAFK True PC9_epitope_Rep3 806.3922672144998 806.39116993586 29.201 2 -1.243134730070277 0.3778140774493067 1.0 ['ENSG00000146038|ENST00000378454|DCDC2'] 77923 7294 NVIVRLIEQAP True NCI_RA007_Epitope_Rep4 1250.73467113262 1250.73356993586 34.692 2 -1.2432218987370842 0.3778170787124031 1.0 ['RIF1|p.T2383Nfs*8|1|0.18|ENSG00000080345|chr2:151474009-151474010|-/A|frameshift_variant', 'nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1', 'RIF1|p.V384Cfs*50|1|0.25|ENSG00000080345|chr2:151435533-151435534|-/T|frameshift_variant'] 57166 17502 LDTTRLLR True NCI_RA007_Epitope_Rep3 986.58727862294 986.58618993586 76.798 2 -1.2432239143127617 0.3778170787124031 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 20669 19353 EQATKLIHNYP True PC9_epitope_Rep5 1312.6775501793197 1312.67644993586 79.487 2 -1.2432516460568848 0.3778247199842798 1.0 ['NF1|p.L792H|1|0.51|ENSG00000196712|chr17:31227572-31227572|T/A|missense_variant'] 119715 9314 VAVTGLHV True NCI_RA007_Epitope_Rep1 794.46503823194 794.46394993586 40.224 2 -1.2433018740299626 0.37785692354927847 1.0 ['ENST00000399215.5_1_21:37431931-37432327:-|nuORF'] 15481 9996 EALREFEAI True PC9_epitope_Rep4 1076.55022440788 1076.54912993586 46.11 2 -1.2433652240981719 0.3778722045513159 1.0 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000476227.1_1_2:166805880-166810281:-|nuORF', 'nc|ENSG00000123607|Q7Z4L5-2|TTC21B', 'ENST00000464374.5_1_2:166785584-166810215:-|nuORF'] 136982 22024 YAIRLNKPYIY True PC9_epitope_Rep5 1412.7816213250399 1412.7805299358602 89.742 2 -1.243366439162227 0.3778722045513159 1.0 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 85571 8077 QGEVTVASIDD True PC9_epitope_Rep5 1132.52479750568 1132.52370993586 36.006 2 -1.2434019393908586 0.3778921255587758 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant'] 119448 9377 VARCTHMG True PC9_epitope_Rep3 873.3949271501299 873.39382993586 41.007 2 -1.2435053900517807 0.37789512464693603 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 57379 6836 LEALVEDIDR True H1975_Epitope_Rep1 1171.6084675599898 1171.60736993586 31.339 2 -1.2435093548401897 0.37789512464693603 1.0 ['ENSG00000186462|ENST00000373517|NAP1L2', 'nc|ENSG00000186462|Q9ULW6-2|NAP1L2'] 135219 17596 WEYYDYSNK True PC9_epitope_Rep3 1266.5193182024198 1266.51822993586 72.87 2 -1.24356149682298 0.37790276430352077 1.0 ['ENSG00000196620|ENST00000338206|UGT2B15'] 73976 4461 NCTWARGP True PC9_epitope_Rep2 903.4021207055498 903.40102993586 22.519 2 -1.2436193530908628 0.3779057630199059 1.0 ['nc|ENSG00000292357|P15509-6|CSF2RA', 'nc|ENSG00000292357|P15509-3|CSF2RA', 'ENST00000478256.6_1_X:1407516-1407782:+|nuORF', 'nc|ENSG00000292357|P15509-8|CSF2RA', 'nc|ENSG00000292357|P15509-4|CSF2RA', 'nc|ENSG00000292357|P15509-5|CSF2RA', 'ENSG00000198223|ENST00000381529|CSF2RA', 'nc|ENSG00000292357|P15509-2|CSF2RA', 'nc|ENSG00000292357|P15509-7|CSF2RA'] 108771 14311 SYSSIQKLVIS True H1975_Epitope_Rep1 1223.6761531969898 1223.6750499358602 60.234 2 -1.243645771004067 0.3779057630199059 1.0 ['nc|ENSG00000053900|Q9UJX5-2|ANAPC4', 'ENSG00000053900|ENST00000315368|ANAPC4', 'nc|ENSG00000053900|Q9UJX5-3|ANAPC4', 'ENST00000507925.1_1_4:25395483-25396777:+|nuORF'] 37788 10504 GYDGNWFVGR True PC9_epitope_Rep5 1169.52540664237 1169.5243099358602 45.39 2 -1.2436625257942067 0.3779117600108059 1.0 ['nc|ENSG00000177707|Q9NQS3-2|NECTIN3', 'ENSG00000177707|ENST00000485303|NECTIN3', 'nc|ENSG00000177707|Q9NQS3-3|NECTIN3'] 16170 13948 EEDVTLALKEL True H1975_Epitope_Rep1 1258.66564808294 1258.6645499358601 58.806 2 -1.2437015162322216 0.3779117600108059 1.0 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 123829 13990 VGRLVRLVPF True NCI_RA007_Epitope_Rep3 1154.7287979065397 1154.72770993586 62.338 2 -1.2437020612711585 0.3779117600108059 1.0 ['ENST00000541657.5_3_12:122239775-122239856:-|nuORF'] 57988 11185 LEHFRATP True PC9_epitope_Rep3 969.50321464581 969.50210993586 48.027 2 -1.243703897035412 0.3779117600108059 1.0 ['ENSG00000139797|ENST00000267291|RNF113B'] 122912 4992 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 24.573 2 -1.243764097215962 0.3779300352402353 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 13853 10202 DQPFRPSL True PC9_epitope_Rep5 958.4872302284999 958.48612993586 44.231 2 -1.2437649372748765 0.3779300352402353 1.0 ['ENSG00000150938|ENST00000280527|CRIM1'] 77773 12092 NTQYFNFVELP True NCI_RA007_Epitope_Rep4 1370.6506667251397 1370.6495699358602 53.511 2 -1.2437688693671738 0.3779300352402353 1.0 ['ENSG00000144647|ENST00000344697|POMGNT2'] 16548 13478 EELRKLLNFY True H1975_Epitope_Rep3 1323.71868671531 1323.7175899358601 57.118 2 -1.2437792111286494 0.3779300352402353 1.0 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2', 'ENST00000586441.1_1_19:45867568-45872241:-|nuORF'] 62880 23285 LLNGKKRRRWI True PC9_epitope_Rep6 1438.8997198254597 1438.89862993586 102.67 2 -1.2438154814992033 0.3779376734363105 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 45012 7065 IPEELEIG True PC9_epitope_Rep2 898.4647634484198 898.46366993586 32.573 2 -1.2438281454968318 0.37794067089042777 1.0 ['PCDHGA6|p.K41I|1|0.14|ENSG00000253731|chr5:141374205-141374205|A/T|missense_variant'] 55493 7991 LAGHGFAV True NCI_RA007_Epitope_Rep5 770.4075233558199 770.40642993586 37.426 2 -1.243834139775534 0.37794067089042777 1.0 ['ENSG00000205669|ENST00000645972|ACOT6'] 71548 13525 MAPTGHST True NCI_RA007_Epitope_Rep5 800.3486881503601 800.34758993586 58.711 2 -1.2438644193799975 0.3779436681973332 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 41959 15716 IDEFYKMNE True PC9_epitope_Rep1 1187.5168756742698 1187.5157699358601 65.274 2 -1.243870411287365 0.3779436681973332 1.0 ['MCM4|p.D577Y|1|0.29|ENSG00000104738|chr8:47970805-47970805|G/T|missense_variant'] 10213 3892 CCCCCCCS True PC9_epitope_Rep1 826.10688658094 826.10578993586 19.876 2 -1.2439896427123693 0.3780249732955173 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 66448 19296 LSGQRFTAR True PC9_epitope_Rep1 1034.5621265042598 1034.56102993586 79.026 2 -1.2440136255920167 0.37803260976328457 1.0 ['ENSG00000115641|ENST00000530340|FHL2'] 86302 7156 QISGEDEVECS True H1975_Epitope_Rep3 1194.47104768066 1194.46994993586 32.498 2 -1.2440857361971638 0.3780356046654389 1.0 ['nc|ENSG00000047056|Q9Y2I8-2|WDR37'] 125169 7553 VIHEIQRLVD True NCI_RA007_Epitope_Rep1 1220.6877209402 1220.68662993586 33.373 2 -1.2441251835574323 0.3780356046654389 1.0 ['nc|ENSG00000290611|Q6ZSU1|CYP2G1P'] 84013 11578 PVTDGQPHSI True H1975_Epitope_Rep3 1049.51417325233 1049.5130699358601 49.663 2 -1.2441284703830626 0.3780432407214153 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 95479 7757 RWLWWQPWWWK True NCI_RA007_Epitope_Rep2 1756.8779217517197 1756.87627490379 34.801 3 -1.244260126498267 0.3780754309286451 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 19294 6735 ELKQILHSW True NCI_RA007_Epitope_Rep1 1152.62914343492 1152.6274949037902 30.209 3 -1.2443124946596316 0.3780936947554508 1.0 ['ENSG00000185267|ENST00000465530|CDNF', 'nc|ENSG00000185267|Q49AH0-2|CDNF'] 120804 9297 VELKDIIRQK True NCI_RA007_Epitope_Rep1 1240.7503211967598 1240.74868490379 40.159 3 -1.244383735358343 0.3780936947554508 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'ENST00000472829.1_1_3:121448028-121448843:-|nuORF'] 86600 23441 QLEGLLSECL True PC9_epitope_Rep1 1103.55326118299 1103.55267496793 94.949 1 -1.244389567517704 0.3780936947554508 1.0 ['ENST00000583601.1_1_17:30367683-30367950:+|nuORF'] 118134 20026 TYILRWTVELI True PC9_epitope_Rep3 1405.79693703601 1405.79530490379 82.28 3 -1.244428158574011 0.3780936947554508 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 43374 10227 IGAPKQVP True NCI_RA007_Epitope_Rep2 808.4806882960798 808.47958993586 44.372 2 -1.244463858542458 0.37810896412875344 1.0 ['ENST00000608694.1_1_7:129250897-129251161:-|nuORF'] 78767 16194 PAAKTRKQ True NCI_RA007_Epitope_Rep3 898.5348491272598 898.5343049679301 71.392 1 -1.2444796525691142 0.37810896412875344 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 102589 17650 SLWDRWSLP True PC9_epitope_Rep1 1158.5821932425 1158.58054490379 72.683 3 -1.2445342628078477 0.3781149493015148 1.0 ['ENST00000454175.1_1_7:99103105-99103198:+|nuORF'] 12390 7886 DISSMKLKRSS True NCI_RA007_Epitope_Rep1 1250.66527124346 1250.66362490379 34.669 3 -1.2445352304916204 0.3781149493015148 1.0 ['ENSG00000169994|ENST00000409816|MYO7B'] 67166 19273 LSQVFLII True PC9_epitope_Rep5 931.5742543277498 931.57314993586 79.177 2 -1.2445445602537706 0.3781149493015148 1.0 ['nc|ENSG00000038532|Q2KHT3-2|CLEC16A', 'ENSG00000038532|ENST00000409790|CLEC16A'] 88312 11331 QSFQEQVEHYR True H1975_Epitope_Rep3 1449.66369102033 1449.66258993586 48.693 2 -1.244553426107947 0.3781149493015148 1.0 ['ENSG00000163714|ENST00000473835|U2SURP', 'nc|ENSG00000163714|O15042-2|U2SURP', 'nc|ENSG00000163714|O15042-3|U2SURP'] 116830 5003 TVEKEM[Oxidation]KSLA True H1975_Epitope_Rep3 1150.59037534814 1150.58926993586 24.371 2 -1.2446173507355212 0.3781471342818212 1.0 ['ENSG00000135951|ENST00000393483|TSGA10', 'nc|ENSG00000135951|Q9BZW7-2|TSGA10', 'ENST00000478090.5_1_2:99689501-99743552:-|nuORF'] 55287 8740 LADTRVTQSSI True NCI_RA007_Epitope_Rep2 1189.63026563373 1189.62916993586 38.643 2 -1.2446896357609343 0.3781501258209047 1.0 ['ENSG00000078898|ENST00000170150|BPIFB2'] 41941 8213 IDDQRKGL True PC9_epitope_Rep2 943.5086939490699 943.50758993586 36.948 2 -1.2446898850201626 0.3781501258209047 1.0 ['ENSG00000149328|ENST00000535456|GLB1L2'] 83546 22038 PTVRPAPPWL True PC9_epitope_Rep3 1132.6393141958 1132.63820993586 90.067 2 -1.2448578660807568 0.3781700341246655 1.0 ['ENST00000268171.7_1_15:91426009-91426111:+|nuORF'] 109312 8497 TAWDRKPL True PC9_epitope_Rep4 985.5345147740899 985.53340993586 40.157 2 -1.244906376752975 0.37817601571130477 1.0 ['ENST00000264560.11_1_19:747626-748151:+|nuORF'] 106079 7462 STARMTPPP True H1975_Epitope_Rep2 956.47495129264 956.47384993586 33.65 2 -1.2449072516362223 0.37817601571130477 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant'] 130015 7589 VSAIEEHFFQ True NCI_RA007_Epitope_Rep2 1205.57168812845 1205.5705899358602 34.143 2 -1.2449109045611175 0.37817601571130477 1.0 ['ENSG00000169299|ENST00000381967|PGM2'] 139649 12313 YMNLEKIWNVP True H1975_Epitope_Rep3 1405.7064077794498 1405.7053099358602 52.545 2 -1.244923252553399 0.37817601571130477 1.0 ['SLC25A43|p.G194V|1|0.49|ENSG00000077713|chrX:119410253-119410253|G/T|missense_variant'] 94592 21877 RRSTEHWW True PC9_epitope_Rep6 1156.5526244497198 1156.5515299358601 97.051 2 -1.244980576207731 0.37819592247548206 1.0 ['nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27', 'ENSG00000159314|ENST00000685559|ARHGAP27', 'nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27', 'ENST00000531735.5_1_17:43481393-43507645:-|nuORF'] 65272 13190 LQVGVEFEAST True H1975_Epitope_Rep3 1178.5819184589798 1178.5813749679298 55.987 1 -1.245055987884026 0.37820654441907847 1.0 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 80031 13038 PFFWLFEEREK True NCI_RA007_Epitope_Rep2 1526.7558005000199 1526.75470993586 55.342 2 -1.2451747390923353 0.37820654441907847 1.0 ['ENST00000478866.5_1_1:161172175-161179984:+|nuORF', 'NDUFS2|p.E315Sfs*27|1|0.31|ENSG00000158864|chr1:161210667-161210667|G/-|frameshift_variant', 'nc|ENSG00000158864|O75306-2|NDUFS2', 'ENSG00000158864|ENST00000676972|NDUFS2', 'ENST00000483804.5_1_1:161179060-161183980:+|nuORF'] 42499 23152 IEEILQLKLL True PC9_epitope_Rep6 1210.7536752417 1210.75256993586 102.15 2 -1.2452386600200627 0.37820654441907847 1.0 ['ENST00000506902.1_1_5:60475632-60527744:+|nuORF'] 101300 9462 SLIGSPAVKP True H1975_Epitope_Rep1 967.57023157647 967.56912993586 41.314 2 -1.245242752843291 0.3782264498312366 1.0 ['ENST00000542726.1_1_12:118490142-118500196:-|nuORF'] 56763 20704 LDLRRESL True PC9_epitope_Rep4 1000.5665431783599 1000.56544993586 87.799 2 -1.2452833457340626 0.3782324279875796 1.0 ['ENST00000376055.8_1_20:30310076-30310447:-|nuORF', 'ENST00000376062.6_1_20:30310076-30310181:-|nuORF', 'ENST00000420488.5_1_20:30310076-30311747:-|nuORF', 'ENST00000456404.5_1_20:30310076-30311747:-|nuORF', 'ENST00000422920.1_1_20:30310076-30310447:-|nuORF', 'ENST00000450273.1_1_20:30310076-30311603:-|nuORF', 'ENST00000439267.1_1_20:30310076-30311747:-|nuORF'] 79452 20314 PAVLGITF True PC9_epitope_Rep1 816.4745402864801 816.47344993586 82.967 2 -1.245325637959042 0.3782324279875796 1.0 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 117548 12513 TVSGDRIVL True PC9_epitope_Rep5 958.5447451046199 958.54364993586 53.13 2 -1.2453370192382027 0.3782324279875796 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 139224 18038 YLFVGNIV True PC9_epitope_Rep6 923.5116540711899 923.51054993586 82.014 2 -1.2453928803472616 0.3782324279875796 1.0 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2', 'ENST00000491840.1_1_13:26141407-26501380:+|nuORF', 'ENST00000281620.10_1_13:26279420-26594120:+|nuORF'] 129547 15716 VRLIHLRLK True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 65.619 3 -1.24544648334598 0.37823376368366796 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 34667 17403 GQDGLQNDFL True PC9_epitope_Rep5 1105.50400249145 1105.50290993586 71.941 2 -1.2454466184134518 0.37823376368366796 1.0 ['PUS7|p.T432Ifs*40|1|0.23|ENSG00000091127|chr7:105470791-105470792|-/A|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 66188 8582 LSERHVAQFL True H1975_Epitope_Rep1 1198.64585612822 1198.64474993586 37.937 2 -1.245491061044384 0.37823376368366796 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 72429 27072 MKMLKRKWRTF True H1975_Epitope_Rep2 1523.85811490727 1523.8564649037899 111.74 3 -1.2455267947869317 0.37823376368366796 1.0 ['ENST00000577944.5_2_17:80397520-80400257:+|nuORF'] 42537 4822 IEEQWEDFC True H1975_Epitope_Rep2 1197.46484010141 1197.46374993586 23.639 2 -1.2455338703106935 0.37823376368366796 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 19607 16635 ELQQENKEL True PC9_epitope_Rep6 1129.5615173675699 1129.5604299358602 76.454 2 -1.2456608134533584 0.37823675232555287 1.0 ['ENST00000395941.4_1_12:27107091-27110700:+|nuORF', 'nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2', 'nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2', 'ENSG00000111790|ENST00000229395|FGFR1OP2'] 66958 12975 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 57.802 2 -1.245668794529142 0.37823675232555287 1.0 ['ENSG00000198734|ENST00000367797|F5'] 112115 9978 TIWIEHRL True H1975_Epitope_Rep3 1066.59236400338 1066.59126993586 43.416 2 -1.2457294384520594 0.37825665443567685 1.0 ['ENSG00000176231|ENST00000322107|OR10H4'] 13693 19684 DPSPDAYC True H1975_Epitope_Rep3 866.3116339353 866.31052993586 82.443 2 -1.2457969843056054 0.37825798851421 1.0 ['ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L'] 38180 8367 HDPNAIYS True PC9_epitope_Rep4 915.4086455546301 915.40754993586 39.641 2 -1.2458227678848144 0.37825798851421 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 59587 8967 LFVIVDDP True H1975_Epitope_Rep3 916.4905842734399 916.48948993586 39.488 2 -1.2458727563923402 0.37825798851421 1.0 ['ENSG00000148158|ENST00000374232|SNX30', 'SNX30|p.K99R|1|0.2|ENSG00000148158|chr9:112804915-112804915|A/G|missense_variant'] 128904 4017 VQFVRMMK True NCI_RA007_Epitope_Rep4 1037.5514277915297 1037.5503299358602 21.707 2 -1.2458949459016588 0.37825798851421 1.0 ['ENSG00000151500|ENST00000341541|THYN1'] 61566 21923 LKKALAAAGY True H1975_Epitope_Rep2 1004.6018660579198 1004.60076993586 90.645 2 -1.2459165812171213 0.37825798851421 1.0 ['ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000187475|ENST00000338379|H1-6', 'ENSG00000168298|ENST00000304218|H1-4'] 107980 3224 SWAGALHH True PC9_epitope_Rep6 877.41948502185 877.41838993586 18.423 2 -1.2460189489044704 0.37828087612736977 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 58217 16289 LELFTSRFKDR True NCI_RA007_Epitope_Rep2 1410.76194850962 1410.76084993586 68.088 2 -1.2460247584644617 0.37828087612736977 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 68233 6420 LTEAKPTAA True NCI_RA007_Epitope_Rep3 900.4916469025999 900.49054993586 32.266 2 -1.2460255511074998 0.37828087612736977 1.0 ['ENST00000588549.1_1_17:76037159-76045021:+|nuORF'] 100785 12801 SLEETDCYRV True H1975_Epitope_Rep2 1213.52850298713 1213.52740993586 54.345 2 -1.2461694995674621 0.37829149181575006 1.0 ['ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-9|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7', 'ENST00000554359.1_1_12:56096799-56101466:-|nuORF', 'ENST00000554724.5_1_12:56094596-56105857:-|nuORF'] 140717 8186 YSARHEVR True H1975_Epitope_Rep2 1016.5151763118399 1016.51406993586 36.438 2 -1.2461983633745914 0.37829149181575006 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU'] 128272 9656 VPPKNQSP True PC9_epitope_Rep1 865.4657665079299 865.46466993586 41.998 2 -1.2462550203553513 0.37829149181575006 1.0 ['nc|ENSG00000171533|Q96JE9-3|MAP6', 'ENSG00000171533|ENST00000304771|MAP6'] 27571 23282 FNIHPPLKR True PC9_epitope_Rep2 1120.65054758584 1120.64944993586 95.038 2 -1.2462758876670095 0.3783113903238077 1.0 ['ENST00000441284.5_2_13:46917522-46942212:-|nuORF', 'nc|ENSG00000102445|Q9H714-6|RUBCNL', 'nc|ENSG00000102445|Q9H714-3|RUBCNL', 'nc|ENSG00000102445|Q9H714-4|RUBCNL', 'ENSG00000102445|ENST00000429979|RUBCNL'] 89844 13089 RARLLPPSAP True PC9_epitope_Rep3 1076.6454622054 1076.6443699358601 55.37 2 -1.2463860918322647 0.3783803680981595 1.0 ['ENST00000602421.5_1_1:39547131-39549904:+|nuORF'] 82896 8265 PSAEVTGLP True PC9_epitope_Rep5 869.4494477374499 869.44834993586 36.732 2 -1.246442663670233 0.3783969475014416 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 27639 18427 FPENWKEHI True PC9_epitope_Rep6 1198.5771078620598 1198.5760099358602 83.524 2 -1.24646967217404 0.3783969475014416 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 22658 6052 ETPQTVPA True PC9_epitope_Rep2 841.4181476091699 841.41704993586 28.671 2 -1.246472747028177 0.3783969475014416 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 23396 10490 EVSFDVELPKT True H1975_Epitope_Rep1 1262.6394333350997 1262.6383299358602 45.305 2 -1.246481081497645 0.3783969475014416 1.0 ['CON__Q0V8M9', 'nc|ENSG00000162267|Q06033-2|ITIH3', 'ENSG00000162267|ENST00000449956|ITIH3'] 33623 11467 GLGELLRSL True PC9_epitope_Rep3 956.5654805492 956.56438993586 49.106 2 -1.2465054183156647 0.3783969475014416 1.0 ['ENSG00000149257|ENST00000358171|SERPINH1'] 23129 13916 EVKEERDDIP True PC9_epitope_Rep5 1228.59354577184 1228.59244993586 58.549 2 -1.2465171575008729 0.3783969475014416 1.0 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 83946 16990 PVRKPRYV True PC9_epitope_Rep6 1013.6134338011299 1013.61232993586 77.903 2 -1.2466077692134074 0.3783969475014416 1.0 ['nc|nan|Q96HA4-5|C1orf159', 'ENST00000477196.5_1_1:1018275-1025826:-|nuORF', 'nc|nan|Q96HA4|C1orf159'] 44984 5602 IPARLAGDP True NCI_RA007_Epitope_Rep1 908.5079656730799 908.50686993586 25.854 2 -1.246659055315403 0.3784045737841684 1.0 ['ENST00000354379.8_1_3:37217558-37217720:-|nuORF'] 111977 14451 TIQTSNGQYHL True PC9_epitope_Rep2 1260.60986454232 1260.6087699358602 60.856 2 -1.2467220514508743 0.3784105407792718 1.0 ['ENST00000366475.1_1_1:248524896-248525130:+|nuORF'] 34213 13068 GNKSLRHNL True PC9_epitope_Rep4 1037.57302554113 1037.57192993586 58.159 2 -1.2467491645674813 0.3784105407792718 1.0 ['ENST00000296292.7_1_3:53123294-53123450:-|nuORF'] 79790 19869 PEEKKLKIIL True NCI_RA007_Epitope_Rep4 1209.76965965901 1209.7680149037901 85.883 3 -1.2467621781665965 0.3784105407792718 1.0 ['nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 27330 22942 FLSFLHPE True NCI_RA007_Epitope_Rep5 988.50181766348 988.50072993586 95.473 2 -1.246788806412115 0.3784105407792718 1.0 ['ENST00000494748.1_1_1:1152894-1154464:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-2|SDF4', 'ENST00000478938.1_1_1:1152894-1154464:-|nuORF', 'ENSG00000078808|ENST00000360001|SDF4', 'nc|ENSG00000078808|Q9BRK5|SDF4', 'ENST00000465727.5_1_1:1153052-1158671:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-6|SDF4'] 123693 5710 VGRAPKQA True PC9_epitope_Rep3 825.48208527841 825.48098993586 27.037 2 -1.2468639173876432 0.37843043440923535 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 53873 14196 KTKGAGGG True NCI_RA007_Epitope_Rep1 674.3711378470998 674.3705849679301 59.255 1 -1.2468738417404412 0.3784380597198027 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 12367 5371 DISAYYISTFN True NCI_RA007_Epitope_Rep1 1292.5924831426798 1292.5913899358602 24.97 2 -1.2469209107278891 0.3784533097796752 1.0 ['ENST00000418047.5_3_22:30681611-30682125:-|nuORF', 'ENST00000434987.5_3_22:30681611-30689737:-|nuORF', 'ENST00000447976.1_3_22:30681611-30689721:-|nuORF', 'ENST00000330168.9_3_22:30681611-30688778:-|nuORF', 'ENSG00000239282|ENST00000407689|CASTOR1'] 109288 16498 TAVLSALKGL True PC9_epitope_Rep5 971.60153170475 971.60042993586 68.458 2 -1.246930395032703 0.3784533097796752 1.0 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'ENST00000467978.1_1_2:37268272-37283611:-|nuORF', 'HEATR5B|p.G877Wfs*15|1|0.44|ENSG00000008869|chr2:37049720-37049721|-/A|frameshift_variant'] 53122 23996 KPTKRPTRKN True PC9_epitope_Rep2 1224.74148784856 1224.74038993586 97.796 2 -1.2469503745816957 0.3784542923376958 1.0 ['ENST00000400485.5_1_21:37732534-37734518:+|nuORF'] 101193 8833 SLGYSGCSRQ True H1975_Epitope_Rep1 1056.46584316092 1056.46474993586 38.898 2 -1.2469700539683324 0.3784542923376958 1.0 ['nc|ENSG00000292357|P15509-6|CSF2RA', 'nc|ENSG00000292357|P15509-3|CSF2RA'] 135714 13556 WLSLFLHA True PC9_epitope_Rep5 985.5385375253701 985.53744993586 57.166 2 -1.2469806034865485 0.3784542923376958 1.0 ['ENSG00000007384|ENST00000262316|RHBDF1', 'ENST00000486045.1_1_16:109134-109779:-|nuORF', 'ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74469085-74473795:-|nuORF'] 19249 16854 ELKAEREKRKN True H1975_Epitope_Rep1 1399.7895602397896 1399.7884699358601 70.238 2 -1.2470886933809557 0.3784542923376958 1.0 ['ENSG00000137815|ENST00000389629|RTF1'] 116700 9962 TVDDEDATVNK True H1975_Epitope_Rep1 1205.5411758458101 1205.5400699358602 43.256 2 -1.2471103857070298 0.3784542923376958 1.0 ['ENST00000553204.5_1_12:49497576-49504308:-|nuORF', 'ENST00000547670.5_1_12:49494396-49503620:-|nuORF', 'nc|ENSG00000139636|Q6UX01-5|LMBR1L', 'ENST00000550867.5_1_12:49494935-49504419:-|nuORF', 'nc|ENSG00000139636|Q6UX01-3|LMBR1L', 'ENSG00000139636|ENST00000267102|LMBR1L'] 65841 19543 LSDLGKRE True PC9_epitope_Rep6 916.4977949122 916.49668993586 87.835 2 -1.24711688588589 0.3784542923376958 1.0 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000459857.5_1_22:45072965-45122509:+|nuORF', 'ENST00000492289.5_1_22:45073049-45126704:+|nuORF'] 87235 22021 QPLHIFDK True H1975_Epitope_Rep3 996.53926580136 996.53816993586 92.082 2 -1.2471388355035733 0.3784542923376958 1.0 ['ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 78897 24311 PAGGLSVSRKE True PC9_epitope_Rep1 1099.59857158263 1099.59797496793 98.341 1 -1.2472405352069575 0.3784542923376958 1.0 ['SOWAHB|p.K729Qfs*26|1|0.5|ENSG00000186212|chr4:76895666-76895667|-/C|frameshift_variant', 'ENSG00000186212|ENST00000334306|SOWAHB'] 4909 19385 ALFPVPEGAP True PC9_epitope_Rep2 996.5280324113198 996.52692993586 79.942 2 -1.2472569796362012 0.3784542923376958 1.0 ['nc|ENSG00000185787|Q9UBU8|MORF4L1'] 54295 12279 KWYYFRTRLNK True H1975_Epitope_Rep3 1573.8517665735296 1573.8506699358602 52.41 2 -1.2473079848614073 0.3784542923376958 1.0 ['ENST00000483733.1_1_3:120424930-120428703:-|nuORF'] 60128 20198 LGLVPREKSVT True PC9_epitope_Rep5 1197.70812203161 1197.7070299358602 82.737 2 -1.2473114144958068 0.3784542923376958 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98'] 130294 9309 VSHFPPSTSA True H1975_Epitope_Rep2 1028.4927095317598 1028.4916099358602 40.766 2 -1.2473219971433456 0.3784542923376958 1.0 ['ENSG00000164244|ENST00000296666|PRRC1', 'nc|ENSG00000164244|Q96M27-3|PRRC1', 'nc|ENSG00000164244|Q96M27-2|PRRC1', 'nc|ENSG00000164244|Q96M27-4|PRRC1', 'nc|ENSG00000164244|Q96M27-5|PRRC1'] 62164 21176 LLELRRTLAH True H1975_Epitope_Rep2 1220.73533983896 1220.73370490379 87.649 3 -1.247324990962004 0.3784542923376958 1.0 ['SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 80875 18244 PHTLLDKTI True PC9_epitope_Rep3 1036.59169529704 1036.5905899358602 75.386 2 -1.2474193056149008 0.37850633501367575 1.0 ['ENSG00000196350|ENST00000601693|ZNF729'] 131066 4625 VTDSKEKEK True NCI_RA007_Epitope_Rep4 1062.55570371114 1062.55460993586 24.205 2 -1.2474292237174156 0.37850633501367575 1.0 ['nc|ENSG00000106635|Q9BQE9-4|BCL7B', 'ENST00000493592.1_1_7:72954140-72971423:-|nuORF', 'nc|ENSG00000106635|Q9BQE9-3|BCL7B', 'ENST00000463858.5_1_7:72951630-72971540:-|nuORF', 'ENSG00000106635|ENST00000223368|BCL7B', 'ENST00000482231.5_1_7:72951630-72971576:-|nuORF'] 10212 3781 CCCCCCCS True PC9_epitope_Rep1 826.10688658094 826.10578993586 19.459 2 -1.247579549539218 0.37855075307854585 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 104141 8996 SQEMNTLFRFW True PC9_epitope_Rep5 1457.6761702803296 1457.6750699358602 39.548 2 -1.2476353380538354 0.37855671114599687 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 78079 24046 NVVKGLMKKF True PC9_epitope_Rep4 1162.6896355165 1162.68799490379 100.96 3 -1.247655205085321 0.37855671114599687 1.0 ['ENSG00000180628|ENST00000336126|PCGF5'] 21839 7787 ESASPPPK True PC9_epitope_Rep1 811.40758292547 811.40648993586 34.776 2 -1.2476682354204216 0.37855671114599687 1.0 ['nc|ENSG00000138182|Q96Q89-4|KIF20B'] 82048 12335 PLYEPEPEPRD True NCI_RA007_Epitope_Rep1 1340.62484590012 1340.6237499358601 51.953 2 -1.2476812775221067 0.37855671114599687 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 104881 14593 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 62.801 2 -1.2477228241263956 0.37858421840123624 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 19125 11094 ELGPCPEDGSD True PC9_epitope_Rep5 1117.42336921225 1117.4222699358602 47.662 2 -1.2477236097314974 0.37858421840123624 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11', 'ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 130934 17156 VTDHLEYHL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 71.248 2 -1.247764467289244 0.3785901743886586 1.0 ['ENSG00000125831|ENST00000377009|CST11'] 117342 9780 TVPANATAP True PC9_epitope_Rep1 840.43413202648 840.43302993586 42.48 2 -1.247804180408626 0.3785901743886586 1.0 ['ENST00000343110.2_1_1:203452523-203452736:+|nuORF'] 8445 5104 ATPFQMFSPAN True PC9_epitope_Rep5 1209.5488445088897 1209.54774993586 24.659 2 -1.247826682597144 0.3785901743886586 1.0 ['ENST00000301785.5_1_11:62480620-62480758:-|nuORF'] 42088 20116 IDLEICELALP True PC9_epitope_Rep1 1227.6420761873899 1227.64096993586 82.206 2 -1.2478404836735526 0.3785901743886586 1.0 ['PCDHGB1|p.S142L|1|0.44|ENSG00000254221|chr5:141350685-141350685|C/T|missense_variant'] 46809 14850 ITHDTFQKELM True PC9_epitope_Rep1 1361.66493689029 1361.66329490379 61.94 3 -1.2479139433189181 0.3785977950283899 1.0 ['nc|ENSG00000003096|Q9P2N7-2|KLHL13', 'ENSG00000003096|ENST00000540167|KLHL13', 'nc|ENSG00000003096|Q9P2N7-4|KLHL13', 'nc|ENSG00000003096|Q9P2N7|KLHL13', 'nc|ENSG00000003096|Q9P2N7-5|KLHL13'] 98781 18733 SGHVSLCWRP True NCI_RA007_Epitope_Rep5 1140.5498475683999 1140.54820490379 78.88 3 -1.2481982701247991 0.37865446875306585 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 141528 20645 YTLQIFEL True PC9_epitope_Rep4 1025.54334812229 1025.5422499358601 87.567 2 -1.2483881444571165 0.37871114108774295 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000479501.5_1_20:61926459-61943880:+|nuORF', 'COL20A1|p.Y223*|1|0.11|ENSG00000101203|chr20:63307984-63307984|C/-|frameshift_variant'] 114176 22404 TPKSVRRG True PC9_epitope_Rep4 899.5300980999899 899.52900993586 94.41 2 -1.2484621014375454 0.37871875996370147 1.0 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL'] 34246 16121 GNQRGHKQMEK True H1975_Epitope_Rep1 1311.6466014875498 1311.6455099358602 67.352 2 -1.2484695700219806 0.37872637865280145 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1'] 56724 12032 LDLEKLPEF True NCI_RA007_Epitope_Rep2 1102.5910265906998 1102.58992993586 51.394 2 -1.248547852021368 0.378749233599019 1.0 ['EARS2|p.G478Efs*8|1|0.12|ENSG00000103356|chr16:23525301-23525302|-/CC|frameshift_variant', 'ENSG00000103356|ENST00000449606|EARS2', 'nc|ENSG00000103356|Q5JPH6-2|EARS2', 'ENST00000564987.1_1_16:23541198-23555881:-|nuORF'] 102605 17830 SLWHPEPSP True PC9_epitope_Rep1 1048.4977949122 1048.49668993586 73.376 2 -1.2485562701059165 0.378749233599019 1.0 ['ENST00000562945.2_1_16:34428948-34429212:-|nuORF'] 99533 13892 SIDSVRQVI True PC9_epitope_Rep4 1015.5662088251898 1015.56510993586 61.337 2 -1.2485805876240494 0.378749233599019 1.0 ['ENSG00000072415|ENST00000261681|PALS1', 'nc|ENSG00000072415|Q8N3R9-2|PALS1'] 16885 15964 EFKKHYGYSLY True NCI_RA007_Epitope_Rep4 1433.69795127073 1433.6968499358602 69.277 2 -1.2486249412868868 0.3787522071806945 1.0 ['ENSG00000138772|ENST00000264908|ANXA3', 'ENST00000505805.1_1_4:79518453-79531266:+|nuORF'] 91259 13929 RGGQGHGE True PC9_epitope_Rep3 796.3576130412799 796.35650993586 58.656 2 -1.248639975285833 0.3787522071806945 1.0 ['ENSG00000115297|ENST00000233638|TLX2'] 18505 22150 EKGRRLRQLQQ True H1975_Epitope_Rep2 1410.81677804714 1410.81514490379 91.548 3 -1.248682622754182 0.37876744243078203 1.0 ['ENSG00000175467|ENST00000312397|SART1'] 59136 19826 LEYSGRQKI True PC9_epitope_Rep4 1092.5927579262 1092.5916699358602 84.389 2 -1.2486961081022228 0.37876744243078203 1.0 ['ENST00000430060.1_1_21:23157296-23158685:+|nuORF'] 121548 13341 VFDEADRIL True PC9_epitope_Rep3 1076.5502244078798 1076.54912993586 56.35 2 -1.2487655575177503 0.3788084991601378 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 122285 23218 VGAVEAGW True PC9_epitope_Rep2 787.3864535580699 787.3859049679301 94.789 1 -1.2487676522587448 0.3788084991601378 1.0 ['ENST00000593158.1_1_17:27209636-27224592:-|nuORF'] 40531 14323 HREWGSHNCYH True PC9_epitope_Rep1 1424.5792502037202 1424.5781499358602 59.917 2 -1.248856981589155 0.3788084991601378 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 11121 4834 DDDMDENSM True H1975_Epitope_Rep1 1070.3168555383802 1070.3157499358601 23.667 2 -1.2488777006235592 0.3788084991601378 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3'] 117916 9620 TWRWPWLRWWQ True H1975_Epitope_Rep3 1699.8524352798697 1699.85077490379 42.017 3 -1.2489104645655424 0.3788084991601378 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 130906 14731 VTDEDSSH True PC9_epitope_Rep6 888.34610486772 888.34500993586 68.613 2 -1.2490423625171618 0.3788084991601378 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant'] 79161 3123 PALWTLQRRVH True PC9_epitope_Rep2 1375.78368701371 1375.78204490379 17.196 3 -1.2490556613873676 0.3788084991601378 1.0 ['ENST00000505306.5_1_17:48166637-48166859:+|nuORF'] 16002 5764 EDSGVRMT True NCI_RA007_Epitope_Rep1 893.3912812383301 893.39018993586 26.476 2 -1.2491129483401464 0.3788406365709522 1.0 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C'] 113669 6411 TLWPLCHT True PC9_epitope_Rep2 969.47422301665 969.47312993586 30.069 2 -1.2491528302746306 0.37884825227125046 1.0 ['nc|ENSG00000170909|Q8IYS5-2|OSCAR', 'ENSG00000170909|ENST00000358375|OSCAR', 'nc|ENSG00000170909|Q8IYS5-3|OSCAR', 'nc|ENSG00000170909|Q8IYS5-5|OSCAR', 'nc|ENSG00000170909|Q8IYS5|OSCAR', 'nc|ENSG00000170909|Q8IYS5-7|OSCAR'] 124320 5045 VGTQGKPA True NCI_RA007_Epitope_Rep4 756.4130026590799 756.41190993586 25.901 2 -1.249218113611453 0.37888800343284496 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000123612|Q8NER5-2|ACVR1C', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1'] 712 14866 AAVEVLTQVVH True H1975_Epitope_Rep1 1164.65027280232 1164.64916993586 62.416 2 -1.2492386029963074 0.37888800343284496 1.0 ['ENSG00000215421|ENST00000299687|ZNF407', 'ENST00000579200.1_1_18:72775002-72776421:+|nuORF'] 125077 14637 VIDWWSKYYAS True NCI_RA007_Epitope_Rep1 1416.67140216972 1416.6703099358601 60.987 2 -1.2492474072810518 0.3788956182723193 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.N1652Tfs*30|1|0.17|ENSG00000214814|chr8:124101166-124101166|C/-|frameshift_variant'] 12859 14867 DLHHSDRYQV True PC9_epitope_Rep5 1268.58979780408 1268.5881449037902 62.188 3 -1.2493421980699513 0.3789108473911338 1.0 ['ENST00000496262.1_1_1:45079940-45092094:+|nuORF'] 70492 7761 LVVRSLWPG True H1975_Epitope_Rep1 1025.6022004110898 1025.6011099358602 34.81 2 -1.249344813902244 0.3789108473911338 1.0 ['ENST00000254037.6_1_5:80597539-80597650:+|nuORF'] 65440 23437 LRHLWPPPFR True PC9_epitope_Rep4 1317.7458449530097 1317.7441949037902 98.438 3 -1.2493720351269149 0.37891381635405175 1.0 ['ENST00000567696.1_1_16:777755-777887:+|nuORF'] 71860 15267 MELPLEAPP True H1975_Epitope_Rep2 995.4997690581499 995.49866993586 63.883 2 -1.249373024293628 0.37891381635405175 1.0 ['ENSG00000068615|ENST00000538924|REEP1'] 7557 15278 ASEISGFLGQ True PC9_epitope_Rep1 1007.49237517859 1007.49126993586 63.589 2 -1.2494458937874655 0.37893201265108983 1.0 ['nc|ENSG00000185825|P51572-2|BCAP31'] 44808 5409 IMVTINDVP True NCI_RA007_Epitope_Rep3 1000.5263181591599 1000.52522993586 28.288 2 -1.2494623558801368 0.37893201265108983 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 98774 18322 SGHVSLCWRP True NCI_RA007_Epitope_Rep3 1140.5498475683999 1140.54820490379 80.23 3 -1.2494881011569043 0.37893201265108983 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 64186 11276 LPGIHVSA True PC9_epitope_Rep1 792.4493881678 792.44828993586 48.253 2 -1.2495279423316086 0.37893201265108983 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 31258 11713 GDEPGRPRSR True NCI_RA007_Epitope_Rep1 1125.56391740941 1125.56282993586 49.537 2 -1.2495625046568628 0.3789388535500239 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 33187 10623 GIWYWFDPEM True H1975_Epitope_Rep1 1342.5692456003 1342.5681499358602 45.818 2 -1.2495794668124582 0.3789388535500239 1.0 ['ENSG00000109163|ENST00000226413|GNRHR'] 22881 6088 EVDLPAMIFW True PC9_epitope_Rep2 1219.59473207215 1219.59362993586 28.81 2 -1.2495980569768788 0.3789388535500239 1.0 ['ENST00000495072.1_1_1:46165678-46165810:-|nuORF'] 25774 10084 FETRSSFQKRY True H1975_Epitope_Rep3 1447.7208119736297 1447.71970993586 43.826 2 -1.24963710528945 0.3789388535500239 1.0 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 81501 18146 PLGQQKQEV True PC9_epitope_Rep1 1025.5505587610498 1025.54946993586 74.589 2 -1.2496991824679966 0.3789388535500239 1.0 ['nc|ENSG00000169855|Q9Y6N7-6|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-5|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-4|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-3|ROBO1', 'ENSG00000169855|ENST00000464233|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-2|ROBO1'] 29586 25448 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 105.31 3 -1.2497682947241022 0.3789388535500239 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 23243 6279 EVNMEETIY True H1975_Epitope_Rep1 1126.48524119282 1126.4836049037901 29.221 3 -1.2497782606711292 0.3789388535500239 1.0 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF'] 8952 19113 AVGAFLIYISS True PC9_epitope_Rep4 1139.6226610721499 1139.6215699358602 81.609 2 -1.2497820752875484 0.3789388535500239 1.0 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 123794 5130 VGRKTTSN True PC9_epitope_Rep3 861.46682913709 861.4657299358599 24.818 2 -1.2498274763192487 0.3789388535500239 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1', 'nc|ENSG00000163803|Q6P1J6-5|PLB1'] 69329 6824 LTVGLTAS True PC9_epitope_Rep1 760.4330693973201 760.43196993586 31.054 2 -1.249841273938461 0.3789388535500239 1.0 ['nc|ENSG00000107104|Q14678-2|KANK1', 'ENSG00000107104|ENST00000382297|KANK1', 'ENST00000354485.5_1_9:676972-730286:+|nuORF', 'ENST00000489369.5_1_9:676972-732786:+|nuORF'] 27064 8188 FLFPCHVE True NCI_RA007_Epitope_Rep3 990.46332397978 990.46222993586 39.335 2 -1.2499321032668043 0.3789388535500239 1.0 ['ENST00000506187.1_1_17:48541946-48542066:-|nuORF'] 134088 4497 VYKRSLTGQAS True NCI_RA007_Epitope_Rep2 1208.65133543148 1208.6496749037901 22.123 3 -1.2499543988844735 0.3789388535500239 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-3|ACAD10', 'ENST00000508303.5_1_12:112159488-112186840:+|nuORF'] 57727 10935 LEELNLPD True H1975_Epitope_Rep2 941.4705771048499 941.47002496793 47.094 1 -1.2499573062412652 0.3789388535500239 1.0 ['ENSG00000184220|ENST00000421999|CMSS1', 'nc|ENSG00000184220|Q9BQ75-2|CMSS1'] 53876 13521 KTKGAGGG True NCI_RA007_Epitope_Rep4 674.3711378470998 674.3705849679301 59.218 1 -1.2500166822064267 0.3789388535500239 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 75796 7501 NLNIRSESDA True H1975_Epitope_Rep3 1117.5363652488902 1117.53526993586 33.834 2 -1.2500238919484175 0.3789388535500239 1.0 ['ENSG00000101966|ENST00000371199|XIAP'] 126980 21085 VLRRLWKRSDV True NCI_RA007_Epitope_Rep2 1426.8521009267 1426.85044490379 87.223 3 -1.25004429499564 0.3789388535500239 1.0 ['AMACR|p.C70W|1|0.19|ENSG00000242110|chr5:34007810-34007810|G/C|missense_variant'] 70717 4678 LWRGRWRWWEH True NCI_RA007_Epitope_Rep2 1666.8381821980597 1666.8365249037902 22.823 3 -1.2500592516578155 0.3789388535500239 1.0 ['ENST00000361226.7_1_9:35546604-35546643:+|nuORF'] 83985 10496 PVSLTEGK True H1975_Epitope_Rep1 829.4545331178899 829.4539849679301 45.327 1 -1.2501712502676308 0.37894182098954565 1.0 ['ENST00000223073.6_1_7:127950586-127950808:-|nuORF'] 111882 8561 TINSNQQGIRC True NCI_RA007_Epitope_Rep2 1232.59316893236 1232.59206993586 37.945 2 -1.2501904904361418 0.37894182098954565 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|192|3|sense'] 15854 9025 EDFLLSNGY True H1975_Epitope_Rep1 1056.47639076128 1056.47528993586 39.621 2 -1.2502143504481245 0.3789616883594382 1.0 ['ENSG00000162526|ENST00000373534|TSSK3'] 12546 16313 DKNSERIIV True PC9_epitope_Rep1 1072.58767254576 1072.58656993586 67.566 2 -1.2502549598769657 0.37896929958943565 1.0 ['ENST00000505813.1_1_5:110284919-110285081:-|nuORF'] 34282 25339 GNWRIKRQVL True PC9_epitope_Rep2 1268.746573229 1268.74546993586 103.14 2 -1.2503249816324458 0.37898452148976064 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 105238 17126 SRKAKTKAV True NCI_RA007_Epitope_Rep4 987.6189131043899 987.61780993586 74.192 2 -1.250330271356906 0.37898452148976064 1.0 ['ENST00000416034.1_1_21:45466808-45466907:-|nuORF'] 124634 3886 VGWPSGAL True NCI_RA007_Epitope_Rep5 785.4071890026498 785.40608993586 21.226 2 -1.2503870228866913 0.37899213216010197 1.0 ['ADCK4|p.C24S|1|0.05|ENSG00000123815|chr19:40714562-40714562|C/G|missense_variant'] 128551 19927 VPTALEKI True PC9_epitope_Rep1 869.52221875489 869.52112993586 81.468 2 -1.2504292133100643 0.37899509803921566 1.0 ['ENSG00000259431|ENST00000288014|THTPA'] 61659 5497 LKRLKAKKP True PC9_epitope_Rep1 1080.74953335112 1080.74842993586 25.974 2 -1.2504698203936433 0.37899509803921566 1.0 ['ENST00000373465.2_1_X:46278605-46278842:-|nuORF'] 88418 9420 QSPLDDKKDHL True NCI_RA007_Epitope_Rep5 1294.6517293543 1294.65062993586 42.872 2 -1.2504893701737971 0.3790149630519234 1.0 ['ERICH3|p.N537H|1|0.21|ENSG00000178965|chr1:74599812-74599812|T/G|missense_variant'] 62020 12908 LLDQRDRIMRQ True NCI_RA007_Epitope_Rep2 1442.7776156571 1442.77650993586 54.83 2 -1.2505154574173283 0.3790255379638253 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP'] 15747 6541 ECGKAFTC[Carbamidomethyl]SSY True H1975_Epitope_Rep3 1251.49000958286 1251.48947496793 30.127 1 -1.250530254280422 0.3790255379638253 1.0 ['ENSG00000169981|ENST00000396056|ZNF35'] 98782 19311 SGHVSLCWRP True NCI_RA007_Epitope_Rep5 1140.5498475683999 1140.54820490379 81.156 3 -1.2505358049032629 0.3790255379638253 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 122587 19398 VGFFGSKF True PC9_epitope_Rep4 887.4541391950698 887.45304993586 82.724 2 -1.2506036620783763 0.37905301080802883 1.0 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 125087 20678 VIEGQGVEI True PC9_epitope_Rep3 942.5022115862998 942.50110993586 84.811 2 -1.2506043350502254 0.37905301080802883 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 97673 8614 SEHIPLGKFY True H1975_Epitope_Rep2 1189.6131590176099 1189.61152490379 38.09 3 -1.2506417495169422 0.3790851275013173 1.0 ['ENSG00000103888|ENST00000394685|CEMIP', 'nc|ENSG00000103888|Q8WUJ3-2|CEMIP'] 130879 19840 VTDANDEAP True PC9_epitope_Rep1 930.39305506014 930.3925049679301 81.13 1 -1.2507046503846921 0.3791125978752343 1.0 ['CDHR1|p.A801Rfs*40|1|0.28|ENSG00000148600|chr10:84214441-84214441|G/-|frameshift_variant', 'ENSG00000148600|ENST00000623527|CDHR1', 'nc|ENSG00000148600|Q96JP9-2|CDHR1'] 131808 9327 VTQINLRDDKW True NCI_RA007_Epitope_Rep2 1386.7255630009 1386.72446993586 40.888 2 -1.25070902108504 0.3791125978752343 1.0 ['nc|ENSG00000184719|Q5VYX0-2|RNLS', 'ENSG00000184719|ENST00000331772|RNLS'] 63409 18767 LLVLRLRR True NCI_RA007_Epitope_Rep1 1037.71856757601 1037.7179749679299 77.141 1 -1.2507832539169537 0.37912316816154484 1.0 ['nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5', 'ENSG00000253485|ENST00000518069|PCDHGA5'] 13666 3380 DPRCLTRYY True H1975_Epitope_Rep2 1185.5600778989299 1185.55843490379 17.745 3 -1.2507886889844635 0.37912316816154484 1.0 ['ENSG00000185010|ENST00000360256|F8'] 27412 10371 FLWMLKDFK True PC9_epitope_Rep2 1226.6521873786198 1226.65054490379 45.217 3 -1.250887095789834 0.37912316816154484 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B'] 19033 9826 ELFFMRTP True H1975_Epitope_Rep3 1039.51608782863 1039.51498993586 42.822 2 -1.2509547122837679 0.3791261303207783 1.0 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.E1748Rfs*44|1|0.18|ENSG00000122728|chr9:32630339-32630339|T/-|frameshift_variant'] 142044 5235 YVLMLECW True PC9_epitope_Rep5 1055.48201081903 1055.4809099358602 25.152 2 -1.2509601529209082 0.3791261303207783 1.0 ['ENSG00000125508|ENST00000217188|SRMS'] 64269 14627 LPHLVQERL True PC9_epitope_Rep4 1103.6451278522302 1103.64402993586 64.192 2 -1.2510440371537386 0.37915824297004225 1.0 ['ENST00000513693.1_1_5:7690761-7690995:+|nuORF'] 66411 13942 LSGLPDTVFEI True PC9_epitope_Rep1 1189.6230549949698 1189.6219499358601 58.464 2 -1.2511157155260269 0.3791641652066308 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 116847 20711 TVERLLEPL True PC9_epitope_Rep5 1068.6179100448799 1068.6168099358601 84.723 2 -1.2511476549486884 0.3791641652066308 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'CTNNA2|p.A127Qfs*8|1|0.36|ENSG00000066032|chr2:79858092-79858092|G/-|frameshift_variant', 'CTNNA2|p.A278Cfs*4|1|0.32|ENSG00000066032|chr2:79874319-79874320|-/C|frameshift_variant'] 87227 991 QPLGFYKQYF True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 5.1639 3 -1.2511560872958316 0.3791641652066308 1.0 ['ENST00000471538.1_1_1:16200123-16200204:+|nuORF'] 104547 22605 SQPLKFCL True PC9_epitope_Rep2 934.49462410806 934.49352993586 92.451 2 -1.251160896993094 0.3791641652066308 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|71|2|sense'] 30843 13196 GAPGRGDR True NCI_RA007_Epitope_Rep2 784.39399855 784.3934549679301 55.963 1 -1.2511941189632836 0.37917008686277154 1.0 ['ENST00000342427.6_1_20:32379592-32379847:+|nuORF'] 98430 4320 SFFFAYVGI True PC9_epitope_Rep2 1049.5222187548898 1049.52112993586 21.954 2 -1.2512039067860732 0.37917008686277154 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 10827 4988 CSWQDLKDFM True NCI_RA007_Epitope_Rep2 1271.53148019259 1271.52982490379 24.025 3 -1.2512488897910174 0.37917008686277154 1.0 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6'] 5364 11051 ALSEQEFSGQ True H1975_Epitope_Rep3 1094.48801807414 1094.4869299358602 47.598 2 -1.2513019218306525 0.37917008686277154 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'ENST00000471834.1_1_6:152690575-152702320:-|nuORF', 'nc|ENSG00000131018|Q8NF91-12|SYNE1'] 136921 20519 YAGDLQKKLV True PC9_epitope_Rep3 1133.64445914589 1133.6433699358602 84.187 2 -1.2513298956733419 0.37919882396177873 1.0 ['APOA4|p.A188Pfs*54|1|0.19|ENSG00000110244|chr11:116821496-116821496|C/-|frameshift_variant', 'ENSG00000110244|ENST00000357780|APOA4'] 110031 25311 TEKLAQLIAT True PC9_epitope_Rep2 1086.62847472858 1086.62736993586 103.03 2 -1.2514016083940815 0.37919882396177873 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.S538Lfs*13|1|0.1|ENSG00000116539|chr1:155481257-155481257|G/-|frameshift_variant'] 66442 6544 LSGQERTV True PC9_epitope_Rep3 888.4664947839199 888.46538993586 30.198 2 -1.2514221775510823 0.37919882396177873 1.0 ['ENSG00000152104|ENST00000366956|PTPN14'] 103278 17745 SPLLLSPA True PC9_epitope_Rep4 796.46945490604 796.46834993586 76.278 2 -1.2514571241302488 0.37919882396177873 1.0 ['ENST00000558912.1_1_15:40628793-40629063:-|nuORF'] 45223 19122 IPSYITPYVP True PC9_epitope_Rep1 1148.61176203528 1148.6106699358602 78.343 2 -1.2514582148853084 0.37919882396177873 1.0 ['ENSG00000284526|ENST00000640006|unknown'] 70298 11006 LVSDIRMKV True PC9_epitope_Rep2 1059.61105084263 1059.6099499358602 47.656 2 -1.2514658729248522 0.37919882396177873 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 58835 16842 LESRPDLL True PC9_epitope_Rep5 941.5181960036099 941.51708993586 69.792 2 -1.2514721590362754 0.37919882396177873 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 37141 19510 GVQDALNI True PC9_epitope_Rep6 828.43413202648 828.4335849679301 87.707 1 -1.2515072886151721 0.37920178361426893 1.0 ['ENSG00000183576|ENST00000331768|SETD3'] 42008 13812 IDFWKMWQEQR True PC9_epitope_Rep1 1565.74491854649 1565.74382993586 57.971 2 -1.2515153908425418 0.37920178361426893 1.0 ['ENST00000370574.3_2_1:86171783-86171934:-|nuORF'] 23406 18878 EVSNTFKNNI True PC9_epitope_Rep3 1164.5775017848798 1164.57640993586 77.838 2 -1.251596488668881 0.37922924271749514 1.0 ['ENST00000531513.5_1_11:11964592-11970195:+|nuORF'] 19265 7836 ELKGGKAYAK True NCI_RA007_Epitope_Rep1 1063.6025943339098 1063.6014899358602 34.471 2 -1.2516116006070082 0.37922924271749514 1.0 ['nc|ENSG00000162636|Q5T8I3-2|EEIG2', 'ENSG00000162636|ENST00000370035|EEIG2'] 139782 19326 YPGAGAGG True NCI_RA007_Epitope_Rep3 648.2867395167999 648.2861949679301 84.372 1 -1.251634377482188 0.37923051482747216 1.0 ['ENST00000394412.7_1_15:90185548-90188335:-|nuORF'] 64302 7975 LPKLFFYFWRE True NCI_RA007_Epitope_Rep1 1544.8180068337595 1544.81635490379 35.014 3 -1.2516367539427744 0.37923051482747216 1.0 ['ENST00000274054.2_1_4:164087931-164087976:-|nuORF'] 18746 5379 ELAVKDAN True NCI_RA007_Epitope_Rep4 858.44469671018 858.44358993586 27.258 2 -1.2516595084817133 0.37923051482747216 1.0 ['CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF'] 16803 6243 EEVRDWVLT True NCI_RA007_Epitope_Rep2 1145.5716881284498 1145.5705899358602 28.889 2 -1.2516935511070475 0.37923051482747216 1.0 ['ENSG00000138002|ENST00000260570|IFT172'] 37790 9256 GYDLCVLAMW True PC9_epitope_Rep4 1169.5249382601698 1169.5238499358602 43.201 2 -1.2517059615966908 0.37923051482747216 1.0 ['LRFN2|p.A582Pfs*75|1|0.29|ENSG00000156564|chr6:40392570-40392570|G/-|frameshift_variant', 'ENSG00000156564|ENST00000338305|LRFN2'] 32380 20044 GFLRQLQVL True PC9_epitope_Rep1 1072.6393141958 1072.63820993586 81.925 2 -1.2517210784858643 0.37923811856932876 1.0 ['nc|ENSG00000293542|Q9UII6|DUSP13B', 'nc|ENSG00000293542|Q9UII6-4|DUSP13B', 'ENSG00000079393|ENST00000478873|DUSP13'] 99822 11478 SILACKRTEV True PC9_epitope_Rep6 1118.61177911862 1118.6106899358601 55.221 2 -1.2517421182627502 0.37924572212491275 1.0 ['ENST00000319770.7_1_12:6776349-6776460:-|nuORF'] 60916 6951 LIAGSVGF True PC9_epitope_Rep5 762.42759009406 762.42648993586 31.706 2 -1.2518213290652305 0.37930231988437324 1.0 ['ENSG00000137103|ENST00000643932|TMEM8B', 'nc|ENSG00000137103|A6NDV4|TMEM8B'] 103611 13244 SPTEDKVLAV True NCI_RA007_Epitope_Rep4 1057.5655401188499 1057.56444993586 58.073 2 -1.2519101907489067 0.37930527656655727 1.0 ['ENSG00000198128|ENST00000359959|OR2L3', 'ENSG00000279263|ENST00000623922|OR2L8'] 15484 5458 EALRSRMWLS True NCI_RA007_Epitope_Rep3 1247.64447622923 1247.6428349037901 28.479 3 -1.2520058975157882 0.37930527656655727 1.0 ['ENST00000482270.5_1_22:31668491-31671520:+|nuORF'] 64185 11094 LPGIHVSA True PC9_epitope_Rep1 792.4493881678 792.44828993586 47.56 2 -1.2520178954041714 0.3793082331038875 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 58969 10437 LEVAEGYPLYP True NCI_RA007_Epitope_Rep3 1249.6230549949698 1249.6219499358601 48.119 2 -1.2520298041270561 0.3793082331038875 1.0 ['MYF6|p.S31Y|1|0.2|ENSG00000111046|chr12:80707811-80707811|C/A|missense_variant'] 125382 14580 VIRLTSADAL True PC9_epitope_Rep1 1057.6131590176099 1057.61206993586 60.905 2 -1.2521281586285355 0.3793158352419562 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 91169 2188 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 11.507 3 -1.2521533114686116 0.37931879141201974 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 24930 6951 FCLAFIGK True PC9_epitope_Rep3 897.4782457679299 897.47714993586 31.749 2 -1.2521904649450137 0.37931879141201974 1.0 ['nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 96836 15126 SASGFADF True PC9_epitope_Rep4 800.3340836320399 800.33298993586 66.109 2 -1.252250528203882 0.37932639314145744 1.0 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1'] 86903 14221 QLSEIVCLHWL True PC9_epitope_Rep6 1339.69584309575 1339.69474993586 66.589 2 -1.2523081117413735 0.37934455139980894 1.0 ['nc|ENSG00000137494|Q8N9B4|ANKRD42'] 105754 8657 SSGERWIRY True NCI_RA007_Epitope_Rep1 1152.5676058075198 1152.56650993586 37.677 2 -1.252350240312166 0.37934455139980894 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 30597 6336 GAIQSLKRL True PC9_epitope_Rep5 984.6080140675199 984.60690993586 29.346 2 -1.2523739277195571 0.37934455139980894 1.0 ['ENSG00000004139|ENST00000585482|SARM1', 'nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENST00000379061.8_1_17:26708312-26722930:+|nuORF'] 101735 12336 SLNILGNPQV True PC9_epitope_Rep1 1053.58185888933 1053.5807699358602 52.307 2 -1.2523766883843959 0.37934455139980894 1.0 ['nc|ENSG00000144445|A0AUZ9-4|KANSL1L', 'nc|ENSG00000144445|A0AUZ9-3|KANSL1L', 'nc|ENSG00000144445|A0AUZ9-2|KANSL1L', 'ENSG00000144445|ENST00000281772|KANSL1L'] 141734 5257 YTWRWVWSWEW True NCI_RA007_Epitope_Rep5 1683.7622828627896 1683.76063490379 26.917 3 -1.2523990367656603 0.3793475066131087 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 47347 11924 IVGFVPRK True PC9_epitope_Rep1 914.5701720068199 914.5690699358599 50.731 2 -1.2524368052715238 0.3793475066131087 1.0 ['ENSG00000162694|ENST00000370114|EXTL2'] 114045 9128 TPDSIDKD True PC9_epitope_Rep4 889.4028914678499 889.40234496793 42.697 1 -1.2525518481529443 0.3793504616816478 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 126931 9913 VLREVDLL True PC9_epitope_Rep4 955.5702315764698 955.56912993586 45.782 2 -1.252555761455283 0.3793504616816478 1.0 ['ENSG00000158106|ENST00000289013|RHPN1', 'ENST00000522335.5_1_8:144462155-144464818:+|nuORF'] 125170 7489 VIHEIQRLVD True NCI_RA007_Epitope_Rep2 1220.6877209402 1220.68662993586 33.757 2 -1.2526132779097168 0.3793563713844873 1.0 ['nc|ENSG00000290611|Q6ZSU1|CYP2G1P'] 58156 15173 LEKRLEQNLS True PC9_epitope_Rep1 1228.67755017932 1228.67644993586 63.183 2 -1.2526376674852637 0.3793563713844873 1.0 ['ENSG00000136935|ENST00000373555|GOLGA1', 'ENST00000475407.5_2_9:127642811-127683993:-|nuORF'] 14598 5162 DTYFLNDKKSF True NCI_RA007_Epitope_Rep2 1376.66123140884 1376.65957490379 24.697 3 -1.2526535836661958 0.3793563713844873 1.0 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3', 'GABRB3|p.H132Afs*15|1|0.23|ENSG00000166206|chr15:26621382-26621383|-/A|frameshift_variant', 'nc|ENSG00000145864|P47870-3|GABRB2', 'nc|ENSG00000145864|P47870-4|GABRB2', 'nc|ENSG00000166206|P28472-4|GABRB3', 'nc|ENSG00000145864|P47870-1|GABRB2', 'ENSG00000163288|ENST00000295454|GABRB1', 'ENSG00000145864|ENST00000393959|GABRB2', 'ENST00000522758.1_1_5:160886595-160973700:-|nuORF'] 14724 16066 DVLVFLRH True PC9_epitope_Rep4 997.57090028281 997.56980993586 69.732 2 -1.2526721376501797 0.3793563713844873 1.0 27040 21115 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 88.239 2 -1.2527113302991801 0.3793791710034899 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 81900 21733 PLSAAPSP True PC9_epitope_Rep2 738.39120458534 738.39065496793 89.072 1 -1.252775710144088 0.3793791710034899 1.0 ['ENSG00000187257|ENST00000334955|RSBN1L', 'ENST00000396688.5_1_2:220325577-220326654:+|nuORF'] 99706 8991 SIHLQRWDKYS True H1975_Epitope_Rep1 1431.7258973540702 1431.72480993586 39.49 2 -1.2527772567147413 0.3793791710034899 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 79973 14338 PEVINYEPI True PC9_epitope_Rep1 1072.54407639828 1072.5429699358601 59.975 2 -1.252797837473923 0.3793821249709185 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'nc|ENSG00000065534|Q15746-11|MYLK', 'nc|ENSG00000065534|Q15746-7|MYLK', 'nc|ENSG00000065534|Q15746-9|MYLK'] 64192 9566 LPGIHVSA True PC9_epitope_Rep4 792.4493881678 792.44828993586 44.413 2 -1.252810320312602 0.3793821249709185 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 88444 23732 QSQLREKKYLE True PC9_epitope_Rep1 1420.76742781288 1420.76578490379 96.078 3 -1.2529156539460138 0.37940196894744577 1.0 ['ENSG00000196604|ENST00000409914|POTEF'] 91166 1599 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 8.4672 3 -1.2530230221749457 0.3794049222480715 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 808 9822 AAYQEEAERL True PC9_epitope_Rep4 1178.5567663402996 1178.5551149037901 45.424 3 -1.2530671288291222 0.3794049222480715 1.0 ['ENSG00000152413|ENST00000334082|HOMER1'] 62668 17139 LLLIQERWKRA True PC9_epitope_Rep6 1424.86160298124 1424.8599449037902 78.51 3 -1.2531920375397498 0.3794247652165395 1.0 ['ENST00000520874.1_1_8:108995475-108995910:+|nuORF', 'nc|ENSG00000148572|Q96F24-2|NRBF2', 'nc|ENSG00000148572|Q96F24-3|NRBF2', 'ENSG00000148572|ENST00000277746|NRBF2'] 40902 4619 HSPCWKEKCP True NCI_RA007_Epitope_Rep4 1213.53723427937 1213.53559490379 24.182 3 -1.2532800075133739 0.37943236360074445 1.0 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70-2|COL6A5'] 33268 22104 GKIRDILHDL True PC9_epitope_Rep2 1178.6771562565 1178.6760499358602 90.496 2 -1.2533081293047073 0.3794399617988809 1.0 ['ENSG00000181481|ENST00000328381|RNF135', 'nc|ENSG00000181481|Q8IUD6-3|RNF135'] 126997 11808 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8449649037902 49.91 3 -1.2533527569275569 0.37944755981095574 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 56818 20344 LDNLKIRDVEK True PC9_epitope_Rep1 1341.7616141564497 1341.76050993586 83.085 2 -1.2534748328948007 0.3794674012855831 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF'] 131090 7682 VTDWPSSIR True NCI_RA007_Epitope_Rep1 1059.53490869691 1059.53380993586 33.875 2 -1.2535286570469237 0.3794749987756501 1.0 ['ENST00000416132.5_1_2:3687900-3691705:+|nuORF'] 15453 9626 EALKDGEERQK True NCI_RA007_Epitope_Rep1 1301.6575430107298 1301.65644993586 41.442 2 -1.2536721641391568 0.379519326126082 1.0 ['nc|ENSG00000140386|Q9BY12-3|SCAPER', 'ENSG00000140386|ENST00000563290|SCAPER', 'SCAPER|p.V929Cfs*8|1|0.5|ENSG00000140386|chr15:76574211-76574211|C/-|frameshift_variant', 'ENST00000303521.10_1_15:76673691-77134263:-|nuORF'] 44697 7885 ILTRERDPS True H1975_Epitope_Rep1 1085.58292151849 1085.58182993586 35.282 2 -1.2536819104757133 0.3795269227943877 1.0 ['ENSG00000179299|ENST00000381782|NSUN7'] 19935 17388 ELVIRVQPN True PC9_epitope_Rep1 1066.6134933707797 1066.6123899358602 71.687 2 -1.2537103883364782 0.37953746893402385 1.0 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153760401-153761015:-|nuORF'] 61479 7270 LKALQGPLFW True NCI_RA007_Epitope_Rep4 1171.67536535135 1171.67371490379 34.599 3 -1.2537302701993347 0.37953746893402385 1.0 ['ENSG00000175398|ENST00000309675|OR10P1'] 98434 17724 SFFFFFFKRDI True PC9_epitope_Rep4 1499.7601576044697 1499.75851490379 76.199 3 -1.2537321495816927 0.37953746893402385 1.0 ['ENST00000595082.1_1_19:39727075-39727930:-|nuORF'] 79863 7715 PEKKPVWVDEE True H1975_Epitope_Rep3 1354.67688147298 1354.6757899358602 34.659 2 -1.253829349915377 0.37955730760755124 1.0 ['UTP18|p.Q137E|1|0.08|ENSG00000011260|chr17:51263340-51263340|C/G|missense_variant'] 85399 5636 QEVLVSLD True H1975_Epitope_Rep3 901.47566248529 901.47456993586 26.716 2 -1.254029442679607 0.37960163069426933 1.0 ['ENSG00000152467|ENST00000282326|ZSCAN1'] 42862 16819 IEQQIGKVNG True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 69.52 2 -1.254116407249118 0.3796269095182139 1.0 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-5|ATP7A', 'nc|ENSG00000165240|Q04656-6|ATP7A', 'nc|ENSG00000165240|Q04656-4|ATP7A'] 55177 13142 LAARITNII True PC9_epitope_Rep4 983.61276509479 983.61166993586 58.445 2 -1.25414028025715 0.3796269095182139 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 70250 6085 LVRFRRAGP True PC9_epitope_Rep2 1070.6461309117399 1070.64502993586 28.798 2 -1.2542637584524705 0.3796269095182139 1.0 ['ENST00000607688.1_1_5:132299484-132299748:+|nuORF'] 98775 18931 SGHVSLCWRP True NCI_RA007_Epitope_Rep3 1140.5498475683999 1140.54820490379 82.751 3 -1.2542973642129032 0.3796269095182139 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 123738 6541 VGRGQPWAP True PC9_epitope_Rep4 966.5035489989798 966.50244993586 32.287 2 -1.2543051006135857 0.3796269095182139 1.0 ['ENST00000405486.5_2_22:41641775-41642279:-|nuORF'] 135214 20798 WEWLAWWRRP True PC9_epitope_Rep2 1484.7465732289998 1484.74546993586 85.441 2 -1.2543862566477855 0.3796269095182139 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 118899 7268 VADILAIR True NCI_RA007_Epitope_Rep5 869.5334521449299 869.53234993586 34.632 2 -1.2544420584609006 0.3796269095182139 1.0 ['ENSG00000155189|ENST00000285518|AGPAT5'] 13331 4583 DLVFPWFVFI True H1975_Epitope_Rep3 1281.6797820254499 1281.6781349037901 22.75 3 -1.2544601634427666 0.3796269095182139 1.0 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 20001 4317 ELWWSQQPRRS True H1975_Epitope_Rep3 1471.7320453636698 1471.7303849037899 21.722 3 -1.254476111127489 0.3796269095182139 1.0 ['ENSG00000179178|ENST00000439858|TMEM125'] 22854 10510 EVCKKFMERDP True PC9_epitope_Rep3 1380.6529923075998 1380.65134490379 45.364 3 -1.2544960135468992 0.3796269095182139 1.0 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000607339.1_1_13:76178789-76179945:+|nuORF'] 16569 15603 EELVHDLVSAL True NCI_RA007_Epitope_Rep1 1223.6397676882698 1223.6386699358602 64.781 2 -1.2545932066892487 0.3796269095182139 1.0 ['nc|ENSG00000092978|Q9NW75-2|GPATCH2', 'ENSG00000092978|ENST00000366935|GPATCH2'] 117314 16038 TVNDLSMMKY True PC9_epitope_Rep5 1200.551881284 1200.5507899358602 66.679 2 -1.254628362191628 0.3796269095182139 1.0 ['ENSG00000156017|ENST00000376834|CARNMT1'] 44746 7654 ILYGLLLQP True NCI_RA007_Epitope_Rep5 1028.6270181766 1028.62592993586 36.143 2 -1.2546312678113896 0.3796269095182139 1.0 ['CON__ENSEMBL:ENSBTAP00000016285'] 119184 12980 VAKGKVHC True NCI_RA007_Epitope_Rep3 840.46399268612 840.46288993586 58.33 2 -1.2546613831953495 0.3796345031029291 1.0 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A', 'SCN11A|p.G1782R|1|0.11|ENSG00000168356|chr3:38846726-38846726|C/T|missense_variant'] 80349 19135 PGGKKMVL True PC9_epitope_Rep6 828.4891448047998 828.48804993586 86.254 2 -1.2546828377939296 0.37963744966278656 1.0 ['ENST00000482384.1_1_1:109756587-109756749:+|nuORF'] 89202 11906 QVSYKVDNLEQ True PC9_epitope_Rep1 1321.6513950011297 1321.6502899358602 50.662 2 -1.2546875758314768 0.37963744966278656 1.0 ['GTF3C1|p.E932Q|1|0.08|ENSG00000077235|chr16:27493281-27493281|C/G|missense_variant'] 47634 13008 IWEEAYQR True H1975_Epitope_Rep1 1093.5192586327698 1093.5181699358602 55.118 2 -1.2547834452012816 0.37966952264381887 1.0 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 100872 16359 SLERSPEKI True PC9_epitope_Rep2 1057.57677350889 1057.57566993586 68.17 2 -1.2548181929364572 0.37967246823823164 1.0 ['ENSG00000022840|ENST00000325954|RNF10', 'nc|ENSG00000022840|Q8N5U6-2|RNF10'] 67879 13596 LTASPRLTL True PC9_epitope_Rep6 970.58113061334 970.58002993586 64.046 2 -1.2548322494715112 0.37967246823823164 1.0 ['ENST00000527285.1_1_11:18728401-18728901:+|nuORF'] 99685 19441 SIGTM[Oxidation]VEKL True PC9_epitope_Rep5 992.5212331591599 992.52012993586 79.831 2 -1.254845339604628 0.37968300593598925 1.0 ['ENSG00000027001|ENST00000382172|MIPEP'] 122240 23373 VGAQLRDIPPR True PC9_epitope_Rep3 1220.6989543302398 1220.6978499358602 95.184 2 -1.254862798967304 0.37968300593598925 1.0 ['ENST00000526038.1_1_9:100136781-100138195:+|nuORF'] 89796 12582 RALKFPAL True PC9_epitope_Rep3 914.5701720068199 914.5690699358599 53.42 2 -1.2548714267127306 0.37968300593598925 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 57002 14650 LDRIFEGYV True PC9_epitope_Rep5 1110.57095985246 1110.5698699358602 61.354 2 -1.2549044397131417 0.37969059799769905 1.0 ['nc|ENSG00000183914|Q9P225-3|DNAH2'] 35562 11945 GSVVGNLAK True PC9_epitope_Rep5 843.4814165720699 843.48030993586 50.945 2 -1.254937458752594 0.3796935428599403 1.0 ['nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6', 'ENSG00000253305|ENST00000520790|PCDHGB6', 'PCDHGB7|p.R134Sfs*4|1|0.18|ENSG00000254122|chr5:141418258-141418259|-/T|frameshift_variant', 'nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 135124 14250 WEENTPPLGPL True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 60.154 2 -1.2549413338307813 0.3796935428599403 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 63164 7729 LLRQEQRRKE True NCI_RA007_Epitope_Rep2 1354.7793299092598 1354.77822993586 34.69 2 -1.254997937694665 0.3797163172645054 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3'] 54336 17542 KYEDLYAFSYN True H1975_Epitope_Rep3 1411.6295969273897 1411.6284899358602 73.254 2 -1.2550146491735172 0.3797163172645054 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 140149 10518 YQRRRKYSL True NCI_RA007_Epitope_Rep4 1268.7101877202797 1268.7090899358602 47.305 2 -1.255025006338688 0.3797163172645054 1.0 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 80965 21414 PIFYISQLP True PC9_epitope_Rep6 1076.5906326678798 1076.5895299358601 95.242 2 -1.2550543148180597 0.37972390836107306 1.0 ['ENSG00000176198|ENST00000641082|OR11H4', 'nc|ENSG00000176198|Q8NGC9|OR11H4'] 28592 12673 FSGNLIKDD True NCI_RA007_Epitope_Rep5 1007.4923751785899 1007.49126993586 55.404 2 -1.2550817322730574 0.3797314992718417 1.0 ['ENST00000554643.5_1_12:57146314-57157040:+|nuORF'] 25923 14213 FFRLLSRRLMF True PC9_epitope_Rep4 1484.8438447421197 1484.8427499358602 62.579 2 -1.2551779191360328 0.37977580341190004 1.0 ['ENST00000523151.5_1_8:130364907-130382560:-|nuORF'] 25695 18682 FERFKNRKKRY True NCI_RA007_Epitope_Rep2 1570.8844636841395 1570.8833699358602 77.468 2 -1.2552147696217335 0.37979098340594253 1.0 ['ENSG00000166012|ENST00000448108|TAF1D'] 117079 17157 TVIQRAYRRYR True NCI_RA007_Epitope_Rep2 1480.8375134917198 1480.83640993586 71.476 2 -1.2552446626312266 0.37979098340594253 1.0 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 23151 8509 EVKTLNDSLK True H1975_Epitope_Rep1 1145.62920300457 1145.62810993586 37.66 2 -1.2553505263910028 0.3798183998629433 1.0 ['nc|ENSG00000135205|Q8IYE0-2|CCDC146', 'ENSG00000135205|ENST00000285871|CCDC146'] 115971 7511 TSILDNLLLR True NCI_RA007_Epitope_Rep5 1156.6815729306 1156.6804699358602 35.574 2 -1.2553926195747012 0.3798183998629433 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 124273 6175 VGTLGTHT True PC9_epitope_Rep5 784.4079172786402 784.40682993586 28.736 2 -1.255510129710979 0.3798411668971256 1.0 ['ENSG00000166250|ENST00000448775|CLMP', 'CLMP|p.Y13N|1|0.46|ENSG00000166250|chr11:123097944-123097944|A/T|missense_variant'] 100448 9091 SLAGNVLDSGY True NCI_RA007_Epitope_Rep2 1094.52440358286 1094.5233099358602 39.966 2 -1.2555110705135415 0.3798411668971256 1.0 ['nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 97881 21741 SELRVQLRRAR True PC9_epitope_Rep6 1382.82186342758 1382.8207699358602 96.519 2 -1.2555364003269103 0.3798411668971256 1.0 ['ENSG00000166592|ENST00000299759|RRAD', 'ENST00000567791.1_1_16:66955609-66957656:-|nuORF'] 128113 13029 VPLILFLC True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 57.219 2 -1.2556700897168327 0.37991116766796773 1.0 ['nc|ENSG00000091129|Q92823-4|NRCAM', 'NRCAM|p.D610Tfs*44|1|0.27|ENSG00000091129|chr7:108191804-108191804|C/-|frameshift_variant', 'nc|ENSG00000091129|Q92823-3|NRCAM', 'nc|ENSG00000091129|Q92823-6|NRCAM', 'nc|ENSG00000091129|Q92823-2|NRCAM', 'ENSG00000091129|ENST00000379028|NRCAM', 'nc|ENSG00000091129|Q92823-5|NRCAM', 'NRCAM|p.R16K|1|0.06|ENSG00000091129|chr7:108240018-108240018|C/T|missense_variant', 'NRCAM|p.Q25H|1|0.04|ENSG00000091129|chr7:108239990-108239990|C/G|missense_variant'] 19050 9181 ELFLKEYLHFV True PC9_epitope_Rep5 1436.7703879350001 1436.76874490379 40.26 3 -1.2556752604352652 0.37991116766796773 1.0 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 98795 17616 SGLITSPNW True PC9_epitope_Rep1 973.48689587533 973.48578993586 72.552 2 -1.2557000955181399 0.37991116766796773 1.0 ['TLL1|p.D792V|1|0.1|ENSG00000038295|chr4:166077963-166077963|A/T|missense_variant', 'ENSG00000038295|ENST00000061240|TLL1'] 33635 8449 GLGKLDADETP True H1975_Epitope_Rep1 1114.5506183307 1114.5495299358602 37.427 2 -1.2557014781823583 0.37991116766796773 1.0 ['ENSG00000168152|ENST00000302236|THAP9'] 56761 7514 LDLRIPSQP True H1975_Epitope_Rep1 1037.58694426977 1037.58584993586 33.902 2 -1.255705522013753 0.37991116766796773 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 94808 24402 RSQRRPRLRQF True PC9_epitope_Rep3 1498.8705449554998 1498.86889490379 99.182 3 -1.2557290544975448 0.37991116766796773 1.0 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A'] 58960 6943 LETTYIQSYD True H1975_Epitope_Rep1 1231.56084866123 1231.55974993586 31.746 2 -1.2558058366075115 0.37991875489428345 1.0 ['ENSG00000136770|ENST00000376980|DNAJC1'] 27288 6652 FLQSGVQS True NCI_RA007_Epitope_Rep1 864.43413202648 864.43302993586 29.887 2 -1.2559152625156516 0.3799216933806436 1.0 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 135514 24152 WKFRAMRKI True NCI_RA007_Epitope_Rep2 1234.7121022965798 1234.7110099358601 101.45 2 -1.2559291144625173 0.3799216933806436 1.0 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 55286 8931 LADTRVTQSSI True NCI_RA007_Epitope_Rep1 1189.63026563373 1189.62916993586 38.741 2 -1.2560536688044666 0.37994910194293546 1.0 ['ENSG00000078898|ENST00000170150|BPIFB2'] 12671 9988 DLDNTLQKLVP True PC9_epitope_Rep1 1254.6819668534201 1254.68086993586 43.283 2 -1.2560572725759733 0.37994910194293546 1.0 ['MBD3L1|p.A90D|1|0.76|ENSG00000170948|chr19:8842947-8842947|C/A|missense_variant'] 126575 17282 VLLSTVTA True NCI_RA007_Epitope_Rep5 802.48001958974 802.47892993586 73.249 2 -1.256156923090482 0.38000391504355485 1.0 ['ENSG00000120948|ENST00000240185|TARDBP', 'ENST00000456601.1_1_2:239140521-239140857:+|nuORF'] 24842 6806 FAWRHFYWYLT True NCI_RA007_Epitope_Rep2 1588.7615545867998 1588.7599049037901 31.089 3 -1.256158665644571 0.38000391504355485 1.0 ['nc|ENSG00000101278|Q9NQ39|RPS10P5', 'ENST00000477729.1_1_15:60696796-60696997:+|nuORF', 'ENST00000480942.1_1_6:34392413-34392935:-|nuORF', 'ENST00000439253.1_1_9:90631298-90631598:+|nuORF', 'ENSG00000124614|ENST00000648437|RPS10', 'ENST00000408001.1_1_6:34712123-34712447:+|nuORF', 'chr6:34425221-34425583|540|24.75|0.0|21.24|-|ENST00000494077|RPS10-NUDT3,RPS10', 'ENST00000440748.1_1_7:37415149-37415623:+|nuORF'] 5450 8922 ALVLRFFLEYQ True NCI_RA007_Epitope_Rep5 1397.77072228817 1397.7696299358602 40.98 2 -1.2561793479585832 0.38000391504355485 1.0 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A'] 127802 3565 VPEDRGHQ True NCI_RA007_Epitope_Rep4 936.44134266524 936.44024993586 19.733 2 -1.2561955938544955 0.38000391504355485 1.0 ['ENST00000255641.12_1_19:1979231-1979554:+|nuORF'] 117357 8124 TVPEPRVP True H1975_Epitope_Rep2 893.4970666362099 893.49596993586 36.199 2 -1.2562804955195666 0.38003596902259684 1.0 ['ENST00000366613.1_1_1:234509430-234509547:+|nuORF'] 9011 8245 AVGSCRLPV True PC9_epitope_Rep5 900.4851220535198 900.48402993586 36.656 2 -1.256370018309954 0.38008784056570305 1.0 ['ENSG00000158006|ENST00000374282|PAFAH2'] 67507 7374 LSTENKSEFL True H1975_Epitope_Rep1 1166.5819184589798 1166.58082993586 33.368 2 -1.2564024005214702 0.38008784056570305 1.0 ['nc|ENSG00000163072|Q8IVI9-3|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-2|NOSTRIN', 'ENSG00000163072|ENST00000317647|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-4|NOSTRIN', 'ENST00000486873.2_1_2:169699570-169711975:+|nuORF'] 58249 8945 LELNMCIDML True PC9_epitope_Rep3 1193.54943875585 1193.5477949037902 39.355 3 -1.2564483606058041 0.38011989234157084 1.0 ['ENST00000417154.5_1_2:191769812-191769863:+|nuORF'] 42217 6461 IDSDPALQK True H1975_Epitope_Rep3 985.50802524273 985.50692993586 29.824 2 -1.2565073487077947 0.38014729270142644 1.0 ['SYCP1|p.H717Qfs*19|1|0.18|ENSG00000198765|chr1:114944978-114944979|-/AACAAGTG|frameshift_variant', 'SYCP1|p.R868Kfs*9|1|0.06|ENSG00000198765|chr1:114984764-114984765|-/A|frameshift_variant', 'ENSG00000198765|ENST00000369522|SYCP1'] 46599 9969 ITDAKKREA True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 43.21 2 -1.2565651936276685 0.38014729270142644 1.0 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A', 'ENST00000413684.1_1_2:91935968-91936997:-|nuORF'] 95454 13157 RWLEKEERFLK True NCI_RA007_Epitope_Rep2 1532.8463468399198 1532.84470490379 55.81 3 -1.256573719628664 0.3801502250929732 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 81431 18952 PLESFPGI True PC9_epitope_Rep6 858.4487194614599 858.44762993586 85.545 2 -1.2565748880123022 0.3801502250929732 1.0 ['ENSG00000131781|ENST00000254090|FMO5', 'nc|ENSG00000131781|P49326-2|FMO5', 'nc|ENSG00000131781|P49326-3|FMO5'] 137698 5724 YEKLLQSEN True NCI_RA007_Epitope_Rep3 1122.5557037111398 1122.55405490379 29.491 3 -1.2566624018671366 0.3801578078169919 1.0 ['ENSG00000102547|ENST00000409308|CAB39L'] 83998 6442 PVSSGFRDS True PC9_epitope_Rep3 950.4457593393399 950.44466993586 29.805 2 -1.2567498024855543 0.38016367172687127 1.0 ['ENST00000322315.5_1_19:3590178-3593283:+|nuORF'] 69732 17558 LVESFWKAK True PC9_epitope_Rep4 1106.6124307416198 1106.61132993586 75.555 2 -1.2567568758124477 0.38016367172687127 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 75327 22394 NIPFDELKNYL True H1975_Epitope_Rep1 1364.6976169175598 1364.6965099358601 93.17 2 -1.2567745599307296 0.38016367172687127 1.0 ['ENSG00000253710|ENST00000521508|ALG11'] 134523 3793 VYQNHVQHL True NCI_RA007_Epitope_Rep5 1136.57269118796 1136.5710449037902 20.769 3 -1.2567878190411743 0.38016367172687127 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 93216 24454 RPQPLRNRR True NCI_RA007_Epitope_Rep4 1191.70610539935 1191.70444490379 106.15 3 -1.256859960407869 0.38017125382262995 1.0 ['ENST00000549469.1_1_2:176973927-176983694:+|nuORF'] 12547 21331 DKNSFFHY True NCI_RA007_Epitope_Rep3 1056.46649478392 1056.46538993586 92.729 2 -1.256981867089272 0.38020158035080853 1.0 ['ENSG00000166192|ENST00000340912|SENP8'] 99378 7960 SHTRQYLTPP True NCI_RA007_Epitope_Rep2 1198.6094706195001 1198.60836993586 35.594 2 -1.2570031504370334 0.38020158035080853 1.0 ['ENST00000591991.1_1_19:5666960-5667302:+|nuORF'] 29515 22479 FVFYKNGLPS True NCI_RA007_Epitope_Rep5 1170.6073453611798 1170.60568490379 93.639 3 -1.2570126918028213 0.38020158035080853 1.0 ['PPEF2|p.I190V|1|0.48|ENSG00000156194|chr4:75886863-75886863|T/C|missense_variant'] 93215 18368 RPQPLQVRRTF True NCI_RA007_Epitope_Rep5 1396.80515073428 1396.8034949037901 77.463 3 -1.2570199527079615 0.38020158035080853 1.0 ['ENST00000509347.5_1_17:47809682-47810065:-|nuORF', 'ENSG00000121104|ENST00000240364|FAM117A'] 43116 17200 IEYIRQGSL True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 71.418 2 -1.2571115354993463 0.38020916151917317 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 110162 7226 TEPLEINLEP True NCI_RA007_Epitope_Rep1 1153.5866694862498 1153.5855699358601 32.097 2 -1.257186274819703 0.38024706457925633 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-5|USP16', 'ENST00000474835.5_1_21:30400234-30414894:+|nuORF'] 123891 22980 VGRRRRHR True PC9_epitope_Rep1 1091.6649092937098 1091.66437496793 93.19 1 -1.2571880669843287 0.38024706457925633 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 16074 9928 EEAEMSRRMSV True NCI_RA007_Epitope_Rep1 1323.59112032703 1323.59002993586 42.621 2 -1.2572551559309748 0.38024706457925633 1.0 ['nc|ENSG00000115896|Q15111-2|PLCL1', 'PLCL1|p.D986Tfs*30|1|0.41|ENSG00000115896|chr2:198101320-198101320|G/-|frameshift_variant', 'ENSG00000115896|ENST00000428675|PLCL1', 'PLCL1|p.W660*|1|0.14|ENSG00000115896|chr2:198085496-198085496|G/-|frameshift_variant'] 136215 1011 WRSLGPPG True NCI_RA007_Epitope_Rep1 868.4555361773998 868.45442993586 5.3512 2 -1.2572579715137746 0.38024706457925633 1.0 ['ENST00000269280.8_2_17:5487188-5487734:-|nuORF'] 58120 24623 LEKKRKLRKIE True PC9_epitope_Rep3 1439.9300168942298 1439.92837490379 100.08 3 -1.2572611319095712 0.38024706457925633 1.0 ['ENST00000526725.1_1_11:108211081-108276220:-|nuORF', 'nc|ENSG00000166323|Q8NCR3-2|MFI', 'ENSG00000166323|ENST00000393084|C11orf65'] 59704 10446 LGATEVKLL True NCI_RA007_Epitope_Rep1 942.5749826037398 942.57388993586 44.615 2 -1.257370573161276 0.3802499938846897 1.0 ['ENSG00000001036|ENST00000002165|FUCA2'] 132684 9676 VVGRLILG True NCI_RA007_Epitope_Rep2 825.5436229058099 825.54252993586 42.257 2 -1.2574160860359385 0.3802499938846897 1.0 ['ENSG00000132718|ENST00000368324|SYT11'] 95340 16359 RVRVKGGG True NCI_RA007_Epitope_Rep1 827.5089687325898 827.50786993586 67.745 2 -1.2575294924451748 0.3802820346611548 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 126746 25679 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 111.05 3 -1.2575618499206191 0.3802896140110562 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 67137 7926 LSQPKEHSIV True PC9_epitope_Rep1 1136.61897267404 1136.61733490379 35.311 3 -1.2575985741877214 0.3802983979454568 1.0 ['ENSG00000179165|ENST00000454782|PXT1'] 130571 23454 VSRRAAQL True PC9_epitope_Rep4 899.5300980999898 899.52900993586 98.502 2 -1.2576057619094614 0.3802983979454568 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 111976 14888 TIQTSNGQYHL True PC9_epitope_Rep1 1260.60986454232 1260.6087699358602 62.087 2 -1.257616223309258 0.3802983979454568 1.0 ['ENST00000366475.1_1_1:248524896-248525130:+|nuORF'] 22294 4598 ETDHSNDKRSW True H1975_Epitope_Rep3 1373.59600538333 1373.5949099358602 22.808 2 -1.257648293199778 0.3802983979454568 1.0 ['ENST00000437198.6_1_16:14529576-14529846:-|nuORF'] 89909 20410 RCMCPFQV True PC9_epitope_Rep4 982.4186993698198 982.41760993586 86.653 2 -1.2576733800565447 0.3802983979454568 1.0 ['ENST00000367608.6_1_6:142688909-142691321:+|nuORF'] 59879 16727 LGGCHGGR True H1975_Epitope_Rep1 755.3496912098699 755.3491449679301 69.737 1 -1.2576813792452655 0.3802983979454568 1.0 ['ENST00000560486.2_1_15:100797173-100802589:-|nuORF'] 102546 19398 SLVSLRVKP True PC9_epitope_Rep1 997.62841515893 997.62730993586 79.426 2 -1.2577223878431845 0.38033336186760913 1.0 ['ENSG00000156150|ENST00000647563|ALX3'] 64951 14840 LQEPSGTNKDE True PC9_epitope_Rep1 1216.55716026312 1216.55606993586 61.902 2 -1.2577226074037429 0.38033336186760913 1.0 ['nc|ENSG00000137601|Q96PY6-4|NEK1', 'nc|ENSG00000137601|Q96PY6-2|NEK1', 'nc|ENSG00000137601|Q96PY6-6|NEK1', 'nc|ENSG00000137601|Q96PY6|NEK1', 'ENSG00000137601|ENST00000507142|NEK1'] 131821 10585 VTQMCNNPI True PC9_epitope_Rep1 1018.4575869763399 1018.45648993586 45.608 2 -1.2577308481356066 0.38033336186760913 1.0 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.P746Q|1|0.17|ENSG00000121871|chr3:165188594-165188594|G/T|missense_variant'] 74181 11244 NEEKHSLIHAP True H1975_Epitope_Rep3 1273.64149902377 1273.6404099358601 48.352 2 -1.2578422948262584 0.380360745949251 1.0 ['ENST00000479355.1_1_3:52529402-52535457:+|nuORF'] 83007 6298 PSGSYRASVL True PC9_epitope_Rep4 1035.53490869691 1035.53380993586 31.286 2 -1.2578504460276276 0.380360745949251 1.0 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'ENST00000473815.1_1_2:238601140-238644255:+|nuORF'] 68494 13384 LTFSNRGTF True PC9_epitope_Rep2 1041.5243440132099 1041.5232499358601 56.762 2 -1.2578974683672166 0.3803834772188119 1.0 ['nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 99809 6760 SIKQERISY True NCI_RA007_Epitope_Rep4 1122.6033226099 1122.6022299358601 32.622 2 -1.257907656433563 0.3803834772188119 1.0 ['ENSG00000139083|ENST00000396373|ETV6', 'ENST00000541426.1_1_12:11803061-11978588:+|nuORF'] 6993 23674 AQLMLLKFLRY True NCI_RA007_Epitope_Rep4 1394.81081327834 1394.8097099358602 102.67 2 -1.257931659993849 0.3803834772188119 1.0 ['ENST00000563094.5_1_16:69200987-69201092:+|nuORF', 'ENST00000562237.5_1_16:69200987-69202772:+|nuORF'] 107082 10270 SVHHHPLLP True PC9_epitope_Rep6 1035.5613982282698 1035.56030993586 50.186 2 -1.258034978698048 0.3804335864421701 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant'] 47111 10235 ITTYEEYQAQR True NCI_RA007_Epitope_Rep2 1400.65720865756 1400.65610993586 44.402 2 -1.258088736965793 0.3804335864421701 1.0 ['nc|ENSG00000188611|Q9NR71-2|ASAH2', 'ENSG00000188611|ENST00000682911|ASAH2'] 18160 8924 EIKKHRARVKK True NCI_RA007_Epitope_Rep2 1391.8837354081495 1391.8826299358602 39.337 2 -1.258104646584778 0.3804335864421701 1.0 ['ENST00000472303.1_1_22:36545150-36545344:-|nuORF'] 108004 21853 SWRGKINI True PC9_epitope_Rep1 972.5504991913999 972.54940993586 88.867 2 -1.2581049322233762 0.3804335864421701 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|142|3|sense'] 95456 19250 RWLEKEERFLK True PC9_epitope_Rep2 1532.8463468399198 1532.84470490379 79.418 3 -1.2581666481150515 0.3804335864421701 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 66896 13153 LSNLPRSFTL True PC9_epitope_Rep2 1146.63970811862 1146.6386099358601 55.864 2 -1.2581866471718886 0.38044873754355935 1.0 ['ENSG00000095370|ENST00000314830|SH2D3C'] 82464 7312 PPQIEHGT True PC9_epitope_Rep5 877.4293809992101 877.42828993586 33.087 2 -1.2581910488741175 0.38044873754355935 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'ENST00000466229.5_1_1:196648727-196709933:+|nuORF'] 24548 7509 FAGHVSPLINV True PC9_epitope_Rep2 1152.62914343492 1152.6274949037902 34.251 3 -1.2583582505501507 0.3804929939109383 1.0 ['ENSG00000205496|ENST00000380371|OR51A2'] 33934 14147 GLRRRWAV True PC9_epitope_Rep3 1012.6042660997598 1012.60316993586 59.5 2 -1.258458436214252 0.3805372491960825 1.0 ['ENST00000360089.8_1_1:158045972-158047847:+|nuORF'] 91232 23893 RGGGALPA True PC9_epitope_Rep4 697.38712226441 697.3865749679301 100.35 1 -1.2585855288596495 0.38058150339903163 1.0 ['ENST00000371739.3_1_9:139256615-139258104:-|nuORF'] 81228 19855 PKGVSRKLDRL True H1975_Epitope_Rep3 1267.77245362367 1267.7707949037901 83.126 3 -1.2585939151472272 0.3805844235236581 1.0 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 109286 23361 TAVLHPRRLT True PC9_epitope_Rep5 1162.69347502698 1162.69183490379 94.842 3 -1.2586006317433025 0.3805844235236581 1.0 ['ENST00000443602.2_1:149674009-149674339:+|nuORF'] 64402 9418 LPLSWKHRT True H1975_Epitope_Rep3 1136.6454622053998 1136.6443699358601 41.229 2 -1.2587899889436067 0.3806409018107127 1.0 ['ENST00000589768.5_1_17:76732793-76732874:-|nuORF'] 101187 11113 SLGYGHTVPL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 48.071 2 -1.2588121893108717 0.38064847417840375 1.0 ['ENST00000472190.5_1_1:233765551-233807273:+|nuORF'] 96615 17398 SAHFYAIVLR True PC9_epitope_Rep5 1175.6451278522297 1175.64402993586 71.922 2 -1.2588845521062524 0.3806636183583148 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF'] 77952 7697 NVLLFFPRYLI True NCI_RA007_Epitope_Rep2 1393.8121931773298 1393.81108993586 34.565 2 -1.2588977029688808 0.3806636183583148 1.0 ['ENST00000407073.5_2_2:149216331-149221335:+|nuORF'] 138990 4425 YKRISQVYKYI True NCI_RA007_Epitope_Rep2 1459.81873510975 1459.8170849037901 21.845 3 -1.2589793230089188 0.38067119017054835 1.0 ['ENST00000494248.1_1_7:77214868-77230160:+|nuORF'] 41570 10966 HYYAIWKYLYR True PC9_epitope_Rep5 1574.8034193987799 1574.80177490379 47.169 3 -1.2590876595049492 0.3807183549720042 1.0 ['ENSG00000108960|ENST00000262065|MMD'] 5363 11069 ALSEQEFSGQ True H1975_Epitope_Rep1 1094.48801807414 1094.4869299358602 47.54 2 -1.259109240355255 0.3807183549720042 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'ENST00000471834.1_1_6:152690575-152702320:-|nuORF', 'nc|ENSG00000131018|Q8NF91-12|SYNE1'] 5055 6798 ALLAQSVNQ True H1975_Epitope_Rep3 942.51344497634 942.51234993586 31.101 2 -1.2591158613889926 0.3807183549720042 1.0 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'nc|ENSG00000166949|P84022-4|SMAD3', 'nc|ENSG00000166949|P84022-3|SMAD3', 'nc|ENSG00000166949|P84022-2|SMAD3', 'ENSG00000166949|ENST00000327367|SMAD3'] 79317 20812 PARFLPLPGL True PC9_epitope_Rep1 1079.6491506035097 1079.6480499358602 84.881 2 -1.2591872001799864 0.38073349633251835 1.0 ['ENSG00000105550|ENST00000593756|FGF21'] 59277 9323 LFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep3 980.46371818203 980.46262993586 40.858 2 -1.2592071112495373 0.38073349633251835 1.0 ['CON__P02769'] 70169 5820 LVPTHAYA True NCI_RA007_Epitope_Rep2 870.4599528514999 870.45884993586 27.258 2 -1.2592752247874743 0.3807532915245535 1.0 ['ENSG00000131375|ENST00000253693|CAPN7'] 32714 7264 GGVEMGQASM True H1975_Epitope_Rep2 965.3946523666099 965.39354993586 32.877 2 -1.2592837158079306 0.3807608615926261 1.0 ['ENST00000595407.1_1_19:41939391-41944316:-|nuORF'] 69793 20965 LVGEVDILDR True H1975_Epitope_Rep3 1127.6186383208699 1127.61754993586 87.566 2 -1.2593319342805482 0.3807806559661626 1.0 ['nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'ENST00000547697.6_1_12:51844670-51855120:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-8|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-6|SLC4A8', 'SLC4A8|p.T704Hfs*13|1|0.5|ENSG00000050438|chr12:51475137-51475138|-/T|frameshift_variant', 'nc|ENSG00000050438|Q2Y0W8-7|SLC4A8'] 26012 8625 FGGAKVAG True NCI_RA007_Epitope_Rep3 705.3809742548099 705.38042496793 41.003 1 -1.2593564725210884 0.38078822551464475 1.0 ['ENST00000378097.5_1_1:6052749-6100615:+|nuORF'] 36198 19337 GVAYVRPLAL True PC9_epitope_Rep2 1057.6284151589298 1057.62730993586 79.753 2 -1.2594310214950124 0.3808569158364403 1.0 ['ENST00000535678.1_1_2:223725777-223773458:+|nuORF', 'ENST00000392066.7_1_2:223725777-223773468:+|nuORF', 'ENST00000357430.7_1_2:223725777-223765478:+|nuORF'] 89475 9349 QYGEHFRIRQN True H1975_Epitope_Rep2 1446.71164427226 1446.70999490379 40.922 3 -1.2595079194494272 0.38089184431840406 1.0 ['ENSG00000124103|ENST00000371328|FAM209A'] 19006 19969 ELERRREAFTN True PC9_epitope_Rep1 1419.7218746027897 1419.72076993586 81.635 2 -1.2595276629122774 0.38089184431840406 1.0 ['ENSG00000110756|ENST00000349215|HPS5', 'nc|ENSG00000110756|Q9UPZ3-2|HPS5', 'ENST00000352460.7_1_11:18303495-18317646:-|nuORF'] 79335 7615 PARNFTLP True PC9_epitope_Rep6 914.4974009893799 914.49630993586 38.577 2 -1.2595376384317447 0.38089184431840406 1.0 ['ENSG00000162878|ENST00000294964|PKDCC'] 86442 20501 QKLFIRHITTK True H1975_Epitope_Rep2 1383.83505388023 1383.83341490379 84.939 3 -1.259626131482324 0.3808947561422809 1.0 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1'] 132657 17387 VVGAERLR True H1975_Epitope_Rep2 898.5348491272599 898.53374993586 72.171 2 -1.259641261052251 0.3808947561422809 1.0 ['nc|ENSG00000170624|Q92629-3|SGCD', 'nc|ENSG00000170624|Q92629|SGCD', 'ENSG00000170624|ENST00000337851|SGCD'] 80066 24820 PFKRYVKK True H1975_Epitope_Rep1 1064.64948495668 1064.6483899358602 102.79 2 -1.2597065318338745 0.3809634401241887 1.0 ['nc|ENSG00000198732|Q9H4F8|SMOC1', 'ENSG00000198732|ENST00000361956|SMOC1'] 62442 18819 LLHPPPLSL True PC9_epitope_Rep3 985.59605240149 985.59494993586 77.611 2 -1.259739193734617 0.3809710066982839 1.0 ['ENST00000583260.1_1_17:62009328-62009508:-|nuORF'] 130410 6401 VSLREDVPPG True NCI_RA007_Epitope_Rep1 1067.56112344475 1067.56002993586 28.924 2 -1.259752507792521 0.3809785730874066 1.0 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 136214 726 WRSLGPPG True NCI_RA007_Epitope_Rep1 868.4555361773998 868.45442993586 3.8316 2 -1.2598221290540808 0.3809937053107621 1.0 ['ENST00000269280.8_2_17:5487188-5487734:-|nuORF'] 138145 21651 YGKWELYIPP True PC9_epitope_Rep2 1264.6492101731596 1264.64810993586 88.756 2 -1.259822603384542 0.3809937053107621 1.0 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000477426.1_1_3:81704122-81720126:-|nuORF'] 88503 16720 QSVKHALR True NCI_RA007_Epitope_Rep4 937.5457481641298 937.54464993586 72.497 2 -1.2598533228981532 0.3810134936931652 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 83533 15675 PTTRTIREN True PC9_epitope_Rep6 1086.57817049122 1086.5770699358602 72.503 2 -1.260008730683778 0.3810577263893812 1.0 ['ENST00000482108.1_2_7:94297339-94297486:+|nuORF'] 116102 23348 TSRLQRAL True PC9_epitope_Rep1 943.5563128478299 943.55520993586 94.6 2 -1.260030691413492 0.38106063383810607 1.0 ['ENST00000266542.8_1_12:7260911-7260965:-|nuORF'] 48332 20024 IYSFAITLWQM True PC9_epitope_Rep4 1371.6896950861499 1371.6885899358601 85.158 2 -1.2600392377055032 0.38106063383810607 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 26108 18192 FGSAKVIRSL True PC9_epitope_Rep5 1076.63422881536 1076.63312993586 74.985 2 -1.2600582195824996 0.38106819848447815 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF', 'MLPH|p.H257Pfs*19|1|0.28|ENSG00000115648|chr2:237525691-237525692|-/C|frameshift_variant'] 12618 16033 DLAKLRKVP True PC9_epitope_Rep6 1038.6549642599398 1038.65386993586 73.995 2 -1.2601988122355225 0.3811368719521883 1.0 ['ENSG00000011007|ENST00000613537|ELOA', 'nc|ENSG00000011007|Q14241-1|ELOA'] 36759 23507 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 95.698 2 -1.2602581829961121 0.3811397773242242 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'CFAP43|p.L1055Wfs*44|1|0.12|ENSG00000197748|chr10:104164177-104164177|G/-|frameshift_variant'] 133156 4561 VVRDPQGI True NCI_RA007_Epitope_Rep3 882.4923156089399 882.49120993586 24.821 2 -1.260277522654957 0.3811397773242242 1.0 ['ENSG00000090382|ENST00000261267|LYZ'] 109239 8103 TARSGLPSI True PC9_epitope_Rep4 900.5028802926399 900.50178993586 38.621 2 -1.2603755550619904 0.3811549037580202 1.0 ['ENST00000487949.4_1_1:6531427-6531640:-|nuORF'] 5964 7726 APHPFGVP True H1975_Epitope_Rep2 820.4231734199599 820.42206993586 34.671 2 -1.260449304184819 0.3811549037580202 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS'] 70493 18820 LVVRWAVL True PC9_epitope_Rep5 954.6014721350998 954.60036993586 77.404 2 -1.2605430464578096 0.38118049615055605 1.0 ['ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'ENST00000589599.5_2_17:73775264-73775846:-|nuORF', 'ENST00000254810.8_2_17:73775146-73775846:-|nuORF'] 65615 11452 LRYKNCRRFWN True PC9_epitope_Rep6 1554.7990198080197 1554.79792993586 55.111 2 -1.2605797622836956 0.38118049615055605 1.0 ['ENSG00000170791|ENST00000355315|CHCHD7', 'nc|ENSG00000170791|Q9BUK0-2|CHCHD7', 'nc|ENSG00000170791|Q9BUK0-4|CHCHD7'] 138214 16336 YGSKKDDYV True PC9_epitope_Rep3 1073.50293986229 1073.50184993586 67.971 2 -1.260581648411148 0.38118049615055605 1.0 ['ENST00000496055.5_1_1:76251947-76253334:+|nuORF'] 116716 11776 TVDGDLIYWI True H1975_Epitope_Rep3 1193.5968402471299 1193.59574993586 50.44 2 -1.2605915859285477 0.38118049615055605 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant'] 18048 7501 EIFFFKDRFIW True NCI_RA007_Epitope_Rep1 1546.7972713891795 1546.79563490379 33.169 3 -1.2605941824224562 0.38118049615055605 1.0 ['nc|ENSG00000087245|P08253-2|MMP2', 'nc|ENSG00000087245|P08253-3|MMP2', 'ENSG00000087245|ENST00000219070|MMP2'] 19539 13886 ELPSHRTVL True PC9_epitope_Rep1 1050.5821932425001 1050.58108993586 58.252 2 -1.260802247960931 0.38121249893072306 1.0 ['HJURP|p.L743Ffs*4|1|0.15|ENSG00000123485|chr2:233837595-233837596|-/A|frameshift_variant', 'ENSG00000123485|ENST00000411486|HJURP'] 126920 8763 VLQVNKANI True PC9_epitope_Rep4 997.59202965021 997.59092993586 41.215 2 -1.260858386766766 0.38121654976905595 1.0 ['ENST00000484760.1_1_10:79773365-79779077:-|nuORF'] 29810 16135 FVQDVPVDVL True PC9_epitope_Rep1 1129.60192562757 1129.60027490379 66.878 3 -1.2608876395248871 0.38121654976905595 1.0 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 3739 11790 AGSLYRADL True NCI_RA007_Epitope_Rep4 964.4977949121999 964.49668993586 52.324 2 -1.2609098843098179 0.38121654976905595 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF', 'EGF|p.R431Mfs*86|1|0.06|ENSG00000138798|chr4:109961961-109961964|GAGA/-|frameshift_variant'] 3472 19063 AGLEPAPKDAP True PC9_epitope_Rep4 1064.5502244078798 1064.54912993586 81.416 2 -1.2609168218695972 0.38121654976905595 1.0 ['ENSG00000164853|ENST00000316333|UNCX'] 48799 12018 KDPNNLFMVRL True PC9_epitope_Rep5 1345.71764116949 1345.71598490379 51.222 3 -1.2609353219149826 0.38121654976905595 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 123273 10691 VGLLHMVL True NCI_RA007_Epitope_Rep5 880.5204449330801 880.51934993586 47.755 2 -1.2609636852177746 0.38121654976905595 1.0 ['ENSG00000123353|ENST00000243045|ORMDL2'] 133202 5491 VVSDGALPAG True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 26.134 2 -1.2609638032173682 0.38121654976905595 1.0 ['ENST00000369630.7_1_1:113266608-113266695:+|nuORF', 'ENST00000361886.3_1_1:113264878-113266695:+|nuORF'] 125674 24843 VKLNLALA True H1975_Epitope_Rep2 840.5432885526399 840.54274496793 102.12 1 -1.261043780139957 0.38121945259042034 1.0 ['nc|ENSG00000186919|Q401N2-2|ZACN', 'ZACN|p.L253Cfs*10|1|0.1|ENSG00000186919|chr17:76081626-76081626|G/-|frameshift_variant', 'ENSG00000186919|ENST00000334586|ZACN'] 3301 6028 AGFWHSLC True NCI_RA007_Epitope_Rep3 919.40105807639 919.39996993586 30.691 2 -1.2610504379970064 0.38121945259042034 1.0 ['ENST00000366711.3_1_1:228363807-228363963:+|nuORF'] 99944 6597 SINPRNSR True NCI_RA007_Epitope_Rep4 942.4995262477 942.49842993586 32.001 2 -1.2611718387123798 0.3812694727839208 1.0 ['VN1R2|p.T190S|1|0.22|ENSG00000196131|chr19:53258943-53258943|A/T|missense_variant'] 45107 19655 IPLIERLQRN True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74426490379 82.517 3 -1.2611959093253187 0.3812694727839208 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 99915 3147 SIMTYVSLYYH True NCI_RA007_Epitope_Rep1 1375.64822419699 1375.64656490379 16.132 3 -1.2612312597214788 0.3812694727839208 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 46355 5158 ISRGDLLGP True H1975_Epitope_Rep2 926.5185303567799 926.51742993586 24.917 2 -1.2612377365042053 0.3812694727839208 1.0 ['ENST00000609118.1_1_1:111505930-111506428:+|nuORF'] 116074 13105 TSPYSSLL True H1975_Epitope_Rep3 866.43854870058 866.43800496793 55.653 1 -1.2612811801025152 0.3812694727839208 1.0 ['ENST00000486132.5_1_1:45468411-45468630:-|nuORF'] 118820 19456 VAAKKVGTEI True PC9_epitope_Rep4 1014.6073453611799 1014.60624993586 82.953 2 -1.261290820144202 0.38127703247562494 1.0 ['nc|ENSG00000133256|P35913-3|PDE6B', 'ENSG00000133256|ENST00000496514|PDE6B'] 74636 23305 NGKVILFFFF True PC9_epitope_Rep2 1230.6801163786197 1230.67846490379 95.124 3 -1.261365305047774 0.3813165868439058 1.0 ['ENST00000253039.8_1_X:24094929-24095118:+|nuORF'] 14574 22255 DTVHKEEKRSK True PC9_epitope_Rep1 1355.7157265931899 1355.71408490379 90.421 3 -1.2613739239697326 0.3813165868439058 1.0 ['ENSG00000111845|ENST00000379568|PAK1IP1'] 1667 5407 AEFYSHEAI True PC9_epitope_Rep5 1065.47672511445 1065.47562993586 25.81 2 -1.2614289375580607 0.3813241456829039 1.0 ['ENSG00000179477|ENST00000647874|ALOX12B', 'ALOX12B|p.P658Rfs*5|1|0.16|ENSG00000179477|chr17:8072904-8072904|G/-|frameshift_variant', 'ALOX12B|p.L423Sfs*44|1|0.37|ENSG00000179477|chr17:8076998-8076998|G/-|frameshift_variant'] 71859 15167 MELPLEAPP True H1975_Epitope_Rep2 995.4997690581499 995.49866993586 63.494 2 -1.2614551896349548 0.3813270454850888 1.0 ['ENSG00000068615|ENST00000538924|REEP1'] 45314 24098 IPYPIKDVVLC True PC9_epitope_Rep2 1258.69953149386 1258.69789490379 98.193 3 -1.26147291601703 0.3813270454850888 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'ENST00000504467.5_1_5:115348136-115357442:+|nuORF', 'ENST00000503203.5_1_5:115350153-115355748:+|nuORF', 'ENST00000515454.5_1_5:115350123-115359090:+|nuORF'] 120551 20694 VEGDIKAQF True PC9_epitope_Rep1 1005.5131106231698 1005.51257496793 84.424 1 -1.2615288798542303 0.38134268194366405 1.0 ['ENST00000429744.2_1_1:52645740-52646091:+|nuORF'] 136469 24723 WVKSGLGS True PC9_epitope_Rep2 832.4443027873599 832.4437549679301 100.78 1 -1.2615550185630802 0.38134268194366405 1.0 ['ENSG00000143198|ENST00000367889|MGST3'] 110259 5893 TERLFLDHP True H1975_Epitope_Rep3 1126.5771078620598 1126.5760099358602 27.677 2 -1.261579075487228 0.38134268194366405 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 81871 16663 PLRIYEIRRYW True NCI_RA007_Epitope_Rep2 1563.8674166376697 1563.86630993586 69.549 2 -1.2616041659654547 0.38134268194366405 1.0 ['ENST00000320322.2_1_14:21584623-21584770:+|nuORF'] 33954 12675 GLSHPFSI True PC9_epitope_Rep1 856.44430278736 856.44320993586 53.626 2 -1.2616309231091793 0.38134268194366405 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 125459 25232 VIVGPPTH True PC9_epitope_Rep5 818.4650382319401 818.46448496793 102.21 1 -1.2616693262704424 0.38134268194366405 1.0 ['ENST00000447070.1_1_2:27579320-27579698:+|nuORF'] 83734 5600 PVGSNEPMEA True H1975_Epitope_Rep3 1029.44371073401 1029.4426099358602 26.58 2 -1.2616767898485546 0.38134268194366405 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 114687 10364 TQGQAFSL True PC9_epitope_Rep6 850.4184819623399 850.41793496793 50.587 1 -1.2617115343002427 0.38134268194366405 1.0 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 80348 13123 PGGKKMVL True NCI_RA007_Epitope_Rep3 828.4891448047998 828.48804993586 58.897 2 -1.2617253482574597 0.38134268194366405 1.0 ['ENST00000482384.1_1_1:109756587-109756749:+|nuORF'] 80772 5448 PHKC[Carbamidomethyl]CIYR True NCI_RA007_Epitope_Rep2 1075.5055405076998 1075.50444993586 25.811 2 -1.2617512792590753 0.38134268194366405 1.0 ['ENST00000566833.1_1_15:43477651-43481519:+|nuORF'] 29588 25609 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 105.99 3 -1.2618068247642156 0.38134268194366405 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 141122 10684 YSRQLHINF True NCI_RA007_Epitope_Rep3 1176.60399131624 1176.60235490379 49.07 3 -1.2618117354617124 0.38134268194366405 1.0 ['ENSG00000104321|ENST00000262209|TRPA1', 'TRPA1|p.M235I|1|0.21|ENSG00000104321|chr8:72062901-72062901|C/T|missense_variant', 'TRPA1|p.S470Mfs*6|1|0.19|ENSG00000104321|chr8:72055556-72055556|C/-|frameshift_variant'] 76102 1119 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 6.1636 3 -1.2618296171932994 0.38134268194366405 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 125221 12727 VIIQQAVPSP True PC9_epitope_Rep1 1050.6073453611798 1050.6062499358602 53.828 2 -1.2618799635941413 0.38134268194366405 1.0 ['nc|ENSG00000115966|P15336-3|ATF2', 'nc|ENSG00000115966|P15336-7|ATF2', 'nc|ENSG00000115966|P15336-4|ATF2', 'nc|ENSG00000115966|P15336-5|ATF2', 'ENSG00000115966|ENST00000264110|ATF2'] 110456 18098 TFDVPGEFLIF True PC9_epitope_Rep4 1283.64379043955 1283.64268993586 77.68 2 -1.2619074243758817 0.38134268194366405 1.0 ['ENST00000583490.1_1_18:19748270-19748778:-|nuORF'] 36309 5334 GVEGVGHL True PC9_epitope_Rep3 766.39735259494 766.3962499358599 25.594 2 -1.261963560808172 0.38136069378282644 1.0 ['nc|ENSG00000102100|P78381-3|SLC35A2'] 45006 16526 IPDKIVNLP True PC9_epitope_Rep3 1007.60153170475 1007.60042993586 68.704 2 -1.2619734147787645 0.38136069378282644 1.0 ['NFE2|p.F237_T239del|1|0.14|ENSG00000123405|chr12:54292779-54292787|CGTAGGAAA/-|inframe_deletion'] 13764 7460 DQETPPAPP True H1975_Epitope_Rep2 950.4345259492998 950.43342993586 33.642 2 -1.2619804418727696 0.38136069378282644 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 115909 24646 TSFLSMWLS True H1975_Epitope_Rep3 1070.5106680950198 1070.50956993586 102.54 2 -1.2620031855383176 0.38136069378282644 1.0 ['nc|ENSG00000158296|Q8WWT9-2|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-4|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-3|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-5|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-6|SLC13A3', 'ENSG00000158296|ENST00000279027|SLC13A3'] 135242 6459 WFKEEFFHWVN True PC9_epitope_Rep4 1567.7248347249097 1567.72318490379 31.95 3 -1.2620589771319541 0.38136825005191094 1.0 ['ENST00000493324.5_1_3:25778798-25824881:-|nuORF', 'NGLY1|p.K419Nfs*19|1|0.26|ENSG00000151092|chr3:25733875-25733875|C/-|frameshift_variant', 'nc|ENSG00000151092|Q96IV0-3|NGLY1', 'nc|ENSG00000151092|Q96IV0-5|NGLY1', 'nc|ENSG00000151092|Q96IV0-2|NGLY1', 'ENSG00000151092|ENST00000280700|NGLY1'] 87494 4229 QQEWLEWEDRR True NCI_RA007_Epitope_Rep2 1573.7273539060498 1573.72624993586 21.088 2 -1.2621945576007623 0.3813880203244088 1.0 ['ENSG00000161664|ENST00000293414|ASB16'] 19795 22400 ELSKKEFPGL True PC9_epitope_Rep1 1146.62847472858 1146.62736993586 90.981 2 -1.2623095186188267 0.38140313164130246 1.0 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 79869 6883 PEKSSGDVP True H1975_Epitope_Rep2 914.4345259492999 914.43342993586 31.396 2 -1.2623441217254092 0.38140313164130246 1.0 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C', 'ENST00000471157.2_1_11:2905236-2905503:-|nuORF'] 80424 19147 PGKLTGLRRR True H1975_Epitope_Rep2 1152.7203584811598 1152.7192699358602 79.473 2 -1.2624880747229044 0.3814595419847328 1.0 ['ENST00000479212.5_1_3:113627916-113664322:+|nuORF', 'nc|ENSG00000178075|Q8IYS0-2|GRAMD1C', 'ENSG00000178075|ENST00000358160|GRAMD1C', 'ENST00000471031.1_1_3:113653357-113655330:+|nuORF'] 139894 9299 YPSYVPAA True PC9_epitope_Rep3 866.4174193331799 866.41632993586 40.708 2 -1.262553891882799 0.38147465100089156 1.0 ['nc|ENSG00000179348|P23769-2|GATA2', 'ENSG00000179348|ENST00000341105|GATA2'] 13869 14161 DQSAYVSAI True PC9_epitope_Rep5 952.4501760134399 952.44906993586 59.481 2 -1.262565344879165 0.38147465100089156 1.0 ['ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'nc|ENSG00000290798|Q9H1B4-5|NXF5', 'nc|ENSG00000290798|Q9H1B4-4|NXF5', 'nc|ENSG00000290798|Q9H1B4-6|NXF5', 'nc|ENSG00000290798|Q9H1B4-2|NXF5', 'nc|ENSG00000290798|Q9H1B4|NXF5'] 49974 21383 KIRLPEREKP True H1975_Epitope_Rep2 1264.7615545867998 1264.7604499358602 88.475 2 -1.2626849155060305 0.3815217391304348 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 131083 14011 VTDTLRVP True PC9_epitope_Rep1 899.5076313199099 899.50652993586 58.732 2 -1.2626989456009263 0.3815217391304348 1.0 ['ENSG00000175224|ENST00000683050|ATG13', 'ENST00000528984.5_1_11:46678586-46685654:+|nuORF'] 42315 6149 IDYDRDRFDRE True PC9_epitope_Rep5 1498.6800693604598 1498.67896993586 28.637 2 -1.2627076798476253 0.3815217391304348 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 23610 3895 EWLNKHSMQNR True H1975_Epitope_Rep3 1441.6884662995299 1441.68736993586 20.103 2 -1.2627159707346798 0.3815292925098619 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 81870 16620 PLRIYEIRRYW True NCI_RA007_Epitope_Rep1 1563.8674166376697 1563.86630993586 68.766 2 -1.2627801883174397 0.38156882380958196 1.0 ['ENST00000320322.2_1_14:21584623-21584770:+|nuORF'] 46251 14971 ISNVWFDRFKI True NCI_RA007_Epitope_Rep1 1423.7612202336297 1423.76012993586 62.298 2 -1.2628100811051057 0.38156882380958196 1.0 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000496776.5_1_1:219366436-219366613:+|nuORF'] 100292 17732 SKEKKVVKPV True NCI_RA007_Epitope_Rep3 1140.72304381976 1140.72139490379 77.75 3 -1.2628542801956295 0.3815821610003908 1.0 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 111738 10344 TIHGSKKAP True PC9_epitope_Rep1 937.53451477409 937.53340993586 44.669 2 -1.2629320834911348 0.3815821610003908 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENSG00000166262|ENST00000299338|FAM227B'] 37424 19969 GVTFLLLP True H1975_Epitope_Rep2 858.5214904788999 858.5209449679301 82.789 1 -1.2629538445163764 0.3815821610003908 1.0 ['ENSG00000188124|ENST00000641124|OR2AG2'] 131819 19035 VTQLLRELT True PC9_epitope_Rep3 1071.62880908175 1071.6277099358601 78.439 2 -1.2629805916765569 0.3815821610003908 1.0 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5'] 117740 20397 TVVEWMILPWV True NCI_RA007_Epitope_Rep1 1371.72608059487 1371.72498993586 83.552 2 -1.2629977373835506 0.3815821610003908 1.0 ['ENSG00000072315|ENST00000262839|TRPC5'] 34855 11495 GQLAETVFGTV True PC9_epitope_Rep5 1120.57643915572 1120.57534993586 49.212 2 -1.2630027987323407 0.381589712904053 1.0 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 52346 24581 KKKKKVQLTL True H1975_Epitope_Rep2 1212.8281775946398 1212.8265449037901 101.11 3 -1.263035053135507 0.3815926048039467 1.0 ['ENST00000527958.5_1_11:117041336-117041564:+|nuORF'] 124694 9170 VGYRGRAP True PC9_epitope_Rep6 874.4773342511398 874.47622993586 45.399 2 -1.2630506713257603 0.3815926048039467 1.0 ['LTB|p.V241*|1|0.1|ENSG00000227507|chr6:31580723-31580723|C/-|frameshift_variant', 'ENSG00000227507|ENST00000429299|LTB', 'ENST00000483972.1_1_6:31548488-31550294:-|nuORF', 'ENST00000482429.1_1_6:31548488-31549450:-|nuORF'] 140974 14521 YSGGGCGG True NCI_RA007_Epitope_Rep5 656.22242500808 656.22187496793 62.53 1 -1.2630957178528088 0.3815983881799866 1.0 ['ENSG00000203782|ENST00000368742|LORICRIN'] 138545 3484 YHYRLDWLMWF True NCI_RA007_Epitope_Rep1 1628.7598403346399 1628.7581849037902 17.464 3 -1.2630977790489757 0.3815983881799866 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 18433 6177 EIYFAEMDP True NCI_RA007_Epitope_Rep2 1113.4688628526899 1113.4677699358601 28.634 2 -1.2631014824107827 0.3815983881799866 1.0 ['ENSG00000159459|ENST00000290650|UBR1', 'nc|ENSG00000159459|Q8IWV7-2|UBR1'] 58461 8455 LEPQWYRVLEK True PC9_epitope_Rep4 1459.7823496010299 1459.78069490379 39.985 3 -1.2631440372199223 0.3815983881799866 1.0 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENST00000476031.1_1_1:161515507-161519517:-|nuORF'] 101126 8218 SLGPAAAKPD True H1975_Epitope_Rep2 925.48689587533 925.48578993586 36.563 2 -1.2632082846074668 0.38160593924001174 1.0 ['ZNF862|p.I1034Sfs*13|1|0.16|ENSG00000106479|chr7:149862257-149862257|C/-|frameshift_variant', 'ENSG00000106479|ENST00000223210|ZNF862', 'ZNF862|p.P510Lfs*7|1|0.09|ENSG00000106479|chr7:149860684-149860684|G/-|frameshift_variant'] 23566 7315 EVWWAGDH True PC9_epitope_Rep3 998.4246299719398 998.42352993586 33.143 2 -1.2632471355893795 0.38162570057511264 1.0 ['ENST00000592992.1_1_19:38895920-38896347:+|nuORF'] 23612 11263 EWLQEFGVP True NCI_RA007_Epitope_Rep3 1103.5287606873098 1103.52766993586 51.418 2 -1.2632732112431557 0.38163148191108776 1.0 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA'] 7757 9366 ASQQQVEVYKI True NCI_RA007_Epitope_Rep1 1291.67721582615 1291.67610993586 40.423 2 -1.2632820195644807 0.38163148191108776 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 119267 25706 VALKPLGGL True PC9_epitope_Rep1 866.5589386167799 866.55784993586 103.92 2 -1.2633622262685706 0.38163148191108776 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 32546 27378 GGGGGGGG True PC9_epitope_Rep1 474.18227444826005 474.18172496793 111.91 1 -1.2634251142485247 0.38163148191108776 1.0 ['CON__Q6IFZ6', 'ENST00000258111.4_1_12:70760395-70760632:+|nuORF', 'KCNN2|p.I174Sfs*11|1|0.09|ENSG00000080709|chr5:114363937-114363937|T/-|frameshift_variant', 'ENSG00000103241|ENST00000262426|FOXF1', 'nc|ENSG00000168779|O60902-3|SHOX2', 'ENSG00000123364|ENST00000243056|HOXC13', 'ENST00000556170.5_1_14:75553702-75572727:-|nuORF', 'nc|ENSG00000165655|Q96F45-3|ZNF503', 'ENSG00000185960|ENST00000686671|SHOX', 'ENSG00000168779|ENST00000483851|SHOX2', 'ENST00000591649.5_1_19:10797828-10799985:+|nuORF', 'ENST00000555405.5_1_14:75551269-75558248:-|nuORF', 'nc|ENSG00000168779|O60902|SHOX2', 'ENST00000216019.11_1_22:38881942-38884127:-|nuORF', 'ENSG00000152284|ENST00000282111|TCF7L1', 'KCNN2|p.E429Kfs*4|1|0.3|ENSG00000080709|chr5:114487078-114487078|G/-|frameshift_variant', 'ENSG00000080709|ENST00000673685|KCNN2', 'nc|ENSG00000080709|Q9H2S1|KCNN2', 'ENSG00000143869|ENST00000272224|GDF7', 'ENSG00000108091|ENST00000263102|CCDC6', 'nc|ENSG00000062524|P29376-3|LTK', 'ENST00000563518.5_1_15:41799676-41805922:-|nuORF', 'ENST00000589239.5_1_19:14080804-14104655:-|nuORF', 'ENST00000587928.5_1_19:10794459-10799985:+|nuORF', 'ENST00000372324.5_1_1:44445001-44445064:+|nuORF', 'ENST00000426595.1_1_7:55955154-55973975:+|nuORF', 'ENST00000317216.2_1_8:22550456-22550672:-|nuORF', 'ENST00000345425.6_1_19:14593738-14606936:-|nuORF', 'ENST00000507703.1_1_4:124319460-124322783:+|nuORF', 'ENST00000377560.9_1_12:112820080-112820209:-|nuORF', 'ENST00000373132.3_1_1:36851434-36851494:-|nuORF', 'SRSF11|p.G18V|1|0.1|ENSG00000116754|chr1:70221689-70221689|G/T|missense_variant', 'ENST00000371142.8_1_10:98346624-98346687:-|nuORF', 'FBL|p.G44V|1|0.21|ENSG00000105202|chr19:39840667-39840667|C/A|missense_variant', 'ENST00000491491.1_1_13:77900653-77900983:-|nuORF', 'CXXC4|p.G164_G165insS|1|0.24|ENSG00000168772|chr4:104491310-104491311|-/GCT|inframe_insertion', 'ENST00000393033.8_1_19:14603704-14606936:-|nuORF', 'ENST00000252674.8_2_19:6279890-6279947:-|nuORF', 'ENST00000555993.6_1_14:71267787-71275967:-|nuORF', 'HCN1|p.D209Tfs*4|1|0.22|ENSG00000164588|chr5:45645409-45645409|C/-|frameshift_variant', 'nc|ENSG00000162923|Q9H7D7-3|WDR26', 'nc|ENSG00000178233|Q8IW70-2|TMEM151B', 'ENST00000489107.1_1_9:12775714-12777225:+|nuORF', 'nc|ENSG00000162923|Q9H7D7-4|WDR26', 'nc|ENSG00000292354|O15266-2|SHOX', 'ENST00000608721.1_1_6:161412512-161413208:-|nuORF', 'ENST00000229416.10_1_6:53409297-53409843:-|nuORF', 'ENST00000481580.1_1_20:32664521-32665129:+|nuORF', 'nc|ENSG00000162367|P17542-3|TAL1', 'ENST00000607598.2_1_8:9413493-9414024:-|nuORF', 'ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENST00000542519.1_1_12:6782380-6787618:-|nuORF', 'ENSG00000205922|ENST00000382349|ONECUT3', 'YEATS2|p.G812A|1|0.16|ENSG00000163872|chr3:183775981-183775981|G/C|missense_variant', 'ENST00000378279.3_1_8:117950559-117950772:+|nuORF', 'nc|ENSG00000130224|Q5VUJ6-2|LRCH2', 'ENSG00000119547|ENST00000491143|ONECUT2', 'nc|ENSG00000179915|P58400|NRXN1', 'nc|ENSG00000179915|P58400-1|NRXN1', 'ENSG00000205476|ENST00000380243|CCDC85C', 'ENST00000370544.9_1_1:87794323-87794602:+|nuORF', 'ENSG00000130224|ENST00000317135|LRCH2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'ENSG00000104824|ENST00000221419|HNRNPL', 'ENSG00000169083|ENST00000374690|AR', 'nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF', 'ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'ENSG00000136450|ENST00000258962|SRSF1', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF', 'ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.A1643Hfs*5|1|0.12|ENSG00000155816|chr1:240438076-240438076|G/-|frameshift_variant', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENSG00000126247|ENST00000246533|CAPNS1', 'ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF', 'CON__Q3TTY5', 'nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'ENST00000567567.5_1_15:31233675-31258111:-|nuORF', 'DDX17|p.S685Lfs*8|1|0.07|ENSG00000100201|chr22:38486073-38486073|C/-|frameshift_variant', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000303538.12_1_4:39929740-39979529:-|nuORF', 'ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000120093|ENST00000498678|HOXB3', 'HOXB3|p.P289Rfs*140|1|0.29|ENSG00000120093|chr17:48550764-48550764|G/-|frameshift_variant', 'WIPF1|p.G89D|1|0.07|ENSG00000115935|chr2:174575296-174575296|C/T|missense_variant', 'HOXB3|p.S181C|1|0.22|ENSG00000120093|chr17:48551089-48551089|T/A|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ENSG00000168772|ENST00000394767|CXXC4', 'DACH1|p.P299Qfs*19|1|0.16|ENSG00000276644|chr13:71681863-71681863|G/-|frameshift_variant', 'ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ALK|p.Y826Tfs*5|1|0.08|ENSG00000171094|chr2:29233577-29233577|G/-|frameshift_variant', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000203782|ENST00000368742|LORICRIN', 'nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'ANKRD17|p.T770Pfs*39|1|0.41|ENSG00000132466|chr4:73141766-73141766|G/-|frameshift_variant', 'nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1', 'ENSG00000166233|ENST00000379887|ARIH1', 'ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'SRSF11|p.K404Pfs*18|1|0.07|ENSG00000116754|chr1:70250455-70250456|-/CCAACTTC|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF', 'ENSG00000177733|ENST00000314940|HNRNPA0', 'ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF', 'ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1', 'ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF', 'ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF', 'ENSG00000162613|ENST00000370768|FUBP1', 'nc|ENSG00000162613|Q96AE4-2|FUBP1', 'nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27', 'DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36', 'DHX36|p.G235Afs*25|1|0.5|ENSG00000174953|chr3:154309762-154309762|C/-|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'nc|ENSG00000137449|Q7Z5Q1-8|CPEB2', 'ENSG00000137449|ENST00000538197|CPEB2', 'ENSG00000130675|ENST00000252971|MNX1', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000181588|ENST00000402693|MEX3D', 'nc|ENSG00000181588|Q86XN8-2|MEX3D', 'nc|ENSG00000181588|Q86XN8-3|MEX3D', 'ENSG00000178233|ENST00000451188|TMEM151B', 'ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000273047.8_1_3:19988696-19992457:+|nuORF', 'nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3', 'nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'AEBP2-PLEKHA5|3|fusion', 'AEBP2-PLEKHA5|2|fusion', 'AEBP2-PLEKHA5|4|fusion', 'AEBP2-PLEKHA5|10|fusion', 'AEBP2-PLEKHA5|1|fusion', 'AEBP2-PLEKHA5|9|fusion', 'nc|ENSG00000139154|Q6ZN18|AEBP2', 'ENSG00000139154|ENST00000266508|AEBP2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000132005|ENST00000254325|RFX1', 'ENSG00000153714|ENST00000319264|LURAP1L', 'ENSG00000138606|ENST00000690270|SHF', 'ENSG00000185129|ENST00000331327|PURA', 'ENST00000301015.13_2_16:88800318-88802577:-|nuORF', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENST00000307790.7_3_22:30221719-30234222:-|nuORF', 'ENSG00000100599|ENST00000216487|RIN3', 'ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'ENST00000238855.11_1_2:64751466-64751667:+|nuORF', 'IL13RA1-WDR44|1|fusion', 'IL13RA1-WDR44|2|fusion', 'nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'nc|ENSG00000062524|P29376-5|LTK', 'ENSG00000182968|ENST00000330949|SOX1', 'ENSG00000164588|ENST00000303230|HCN1', 'ENSG00000151615|ENST00000281321|POU4F2', 'ENSG00000169991|ENST00000455833|IFFO2', 'ENSG00000119919|ENST00000344586|NKX2-3', 'ADCY1|p.L707Wfs*35|1|0.37|ENSG00000164742|chr7:45686005-45686005|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1', 'ENSG00000142408|ENST00000270458|CACNG8', 'nc|ENSG00000162367|P17542-2|TAL1', 'ENSG00000162367|ENST00000691006|TAL1', 'nc|ENSG00000160201|Q01081-4|U2AF1', 'nc|ENSG00000160201|Q01081-2|U2AF1', 'ENSG00000160201|ENST00000291552|U2AF1', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000162923|Q9H7D7-2|WDR26', 'nc|ENSG00000162923|Q9H7D7|WDR26', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000153266|Q8TBJ5-2|FEZF2', 'ENSG00000153266|ENST00000283268|FEZF2', 'ENSG00000061455|ENST00000407847|PRDM6', 'nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2', 'ENSG00000103489|ENST00000261381|XYLT1', 'ENSG00000128709|ENST00000249499|HOXD9', 'nc|ENSG00000165655|Q96F45-2|ZNF503', 'ENSG00000165655|ENST00000372524|ZNF503', 'ENSG00000171262|ENST00000397609|FAM98B', 'ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1', 'nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB', 'nc|ENSG00000100106|Q9H2D6-6|TRIOBP'] 79767 21173 PECCPGEM True H1975_Epitope_Rep3 864.2815967603199 864.28048993586 88.426 2 -1.263443522130626 0.3816419222504395 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 32517 9114 GGFGFLPC True H1975_Epitope_Rep2 796.3577962820799 796.35668993586 40.009 2 -1.2634731943777138 0.3816419222504395 1.0 ['ENSG00000215203|ENST00000399770|GRXCR1'] 78008 16688 NVPVIYKHRSR True H1975_Epitope_Rep1 1367.7786016332698 1367.77750993586 69.586 2 -1.2634777561593828 0.3816419222504395 1.0 ['NAV3|p.G1779V|1|0.46|ENSG00000067798|chr12:78177658-78177658|G/T|missense_variant'] 119275 23571 VALKPLGGL True PC9_epitope_Rep6 866.5589386167799 866.55784993586 103.81 2 -1.2635940436226263 0.3816645707937051 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 108883 10034 TAALGTGWE True H1975_Epitope_Rep2 904.42904664604 904.4279499358599 43.587 2 -1.2636478205318684 0.3816645707937051 1.0 ['nc|ENSG00000167528|Q96N77-2|ZNF641', 'nc|ENSG00000167528|Q96N77-3|ZNF641', 'ENSG00000167528|ENST00000547026|ZNF641', 'nc|ENSG00000167528|Q96N77|ZNF641'] 118558 14497 TYQRHYRNVFH True NCI_RA007_Epitope_Rep1 1519.74327875371 1519.74218993586 60.436 2 -1.2636549603740077 0.3816645707937051 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 133420 10894 VVVTGHVL True PC9_epitope_Rep6 822.49633836022 822.49524993586 52.766 2 -1.2636614877432488 0.3816721199394443 1.0 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 45492 5293 IQLYESLAKE True NCI_RA007_Epitope_Rep5 1192.6339540318402 1192.6328499358601 27.054 2 -1.2637279160003292 0.38168721767793923 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 59448 10480 LFPHLDDI True NCI_RA007_Epitope_Rep2 968.4967322830399 968.49562993586 45.358 2 -1.26382355010855 0.38168721767793923 1.0 ['nc|ENSG00000133121|Q9Y3M8-3|STARD13', 'nc|ENSG00000133121|Q9Y3M8-4|STARD13', 'nc|ENSG00000133121|Q9Y3M8-2|STARD13', 'ENSG00000133121|ENST00000336934|STARD13', 'STARD13|p.T556Nfs*4|1|0.09|ENSG00000133121|chr13:33129012-33129013|-/A|frameshift_variant', 'nc|ENSG00000133121|Q9Y3M8-5|STARD13', 'STARD13|p.D480G|1|0.43|ENSG00000133121|chr13:33129238-33129238|T/C|missense_variant'] 93851 7428 RRDWDCFWKRK True H1975_Epitope_Rep2 1594.7939344275794 1594.7922749037898 33.517 3 -1.2638669415521597 0.3816947662707085 1.0 ['nc|ENSG00000151418|Q96LB4-3|ATP6V1G3'] 119263 25082 VALKPLGGL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 103.98 2 -1.2639108724453685 0.3817023146791679 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 85027 17367 QEIAEKNMEK True NCI_RA007_Epitope_Rep5 1218.5914375968598 1218.5897849037901 73.583 3 -1.2639799706119148 0.38170343152215047 1.0 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'nc|ENSG00000164989|Q6TFL3-3|CCDC171'] 113808 18238 TNARPRRR True NCI_RA007_Epitope_Rep2 1025.5954923212098 1025.5943899358601 75.699 2 -1.2639979970294288 0.38170343152215047 1.0 ['DNAJC1|p.D439N|1|0.14|ENSG00000136770|chr10:21759451-21759451|C/T|missense_variant'] 13023 18115 DLNHCKSI True PC9_epitope_Rep5 928.4436511643601 928.44254993586 74.69 2 -1.2640161263451135 0.38170343152215047 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121878388-121880774:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 119261 23935 VALKPLGGL True NCI_RA007_Epitope_Rep4 866.5589386167799 866.55784993586 103.8 2 -1.264017185253279 0.38170343152215047 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 75971 9186 NLVAKMKK True H1975_Epitope_Rep1 930.5684577546599 930.5679049679301 40.241 1 -1.2640261263083152 0.38170343152215047 1.0 ['nc|ENSG00000146833|Q9C037-3|TRIM4', 'ENSG00000146833|ENST00000349062|TRIM4', 'nc|ENSG00000146833|Q9C037|TRIM4'] 13011 8615 DLMRELGLSP True NCI_RA007_Epitope_Rep1 1129.58014463717 1129.5790499358602 37.511 2 -1.264104676843255 0.3817063196572224 1.0 ['ENST00000515664.5_1_4:175158565-175177261:-|nuORF', 'nc|ENSG00000164117|Q9NRD0-2|FBXO8', 'ENSG00000164117|ENST00000393674|FBXO8'] 120667 19764 VEILTTNV True PC9_epitope_Rep4 887.49639792987 887.49530993586 84.146 2 -1.264120331783239 0.3817063196572224 1.0 ['ENST00000354749.6_1_21:38538819-38538858:+|nuORF'] 138438 258 YHKCWEPLKS True PC9_epitope_Rep1 1289.62267815549 1289.6210249037902 1.4138 3 -1.2641881520112577 0.38172607421875 1.0 ['ENSG00000113924|ENST00000283871|HGD'] 47541 26218 IVSRIQRYC True NCI_RA007_Epitope_Rep5 1136.6124478249599 1136.61134993586 108.44 2 -1.2642553520059772 0.3817458282979944 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 57919 8164 LEGFYEIIPK True H1975_Epitope_Rep1 1207.64887581999 1207.6477699358602 36.344 2 -1.2644706478200234 0.38176669474043967 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 77059 23601 NRKLIYNFK True PC9_epitope_Rep3 1194.6873270173799 1194.68569490379 96.067 3 -1.2644738983583994 0.38176669474043967 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 14516 9995 DTLQLEHMFYV True H1975_Epitope_Rep2 1394.6540378534203 1394.65294993586 43.437 2 -1.264479727987681 0.38176669474043967 1.0 ['ENSG00000110237|ENST00000263674|ARHGEF17'] 22994 5834 EVEYYYQRALE True H1975_Epitope_Rep3 1461.6776097489699 1461.6765099358602 27.459 2 -1.264534346147217 0.38176669474043967 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 11001 25201 DAMIVNKA True PC9_epitope_Rep1 860.4425885352 860.44148993586 101.82 2 -1.2645577809863373 0.38176669474043967 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 17168 13281 EGRLRAAYNLV True NCI_RA007_Epitope_Rep3 1260.6938689498 1260.69276993586 59.511 2 -1.26456039434394 0.38176669474043967 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF'] 38761 7828 HGSGCHLR True NCI_RA007_Epitope_Rep2 865.3977040314501 865.3966099358599 35.078 2 -1.2645957559983898 0.3817817866689451 1.0 ['nc|ENSG00000264575|Q96FQ7|LINC00526', 'ENST00000581067.1_1_18:5237365-5237662:-|nuORF'] 85513 15298 QGAEAKAP True PC9_epitope_Rep1 770.3922672144998 770.39116993586 63.665 2 -1.2646044545403574 0.3817817866689451 1.0 ['ENSG00000164626|ENST00000359534|KCNK5'] 55323 21075 LAEEPEAVL True PC9_epitope_Rep1 969.5018772331298 969.50132496793 85.897 1 -1.2647632961024498 0.3818625656047846 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 67157 6185 LSQTCCLVVP True PC9_epitope_Rep5 1061.5249382601698 1061.5238499358602 28.774 2 -1.2648357884904544 0.38187011021469286 1.0 ['ENST00000318562.12_2_11:727090-727309:+|nuORF'] 72426 14875 MKMKKAHK True NCI_RA007_Epitope_Rep3 1000.56741220884 1000.56630993586 65.942 2 -1.2649037371028327 0.38187587721974736 1.0 ['ENST00000456678.1_1_1:198166911-198167118:-|nuORF'] 79095 24019 PALPALWT True NCI_RA007_Epitope_Rep3 867.4854393233501 867.48434993586 104.04 2 -1.2649167183136305 0.38187587721974736 1.0 ['ENSG00000268041|ENST00000597630|ERFL'] 19154 5379 ELHHVRTLKIM True PC9_epitope_Rep1 1375.7758247519498 1375.77418490379 25.524 3 -1.2649389934457795 0.38187587721974736 1.0 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2'] 85266 10399 QEQLKRFRH True H1975_Epitope_Rep2 1240.678887592 1240.6777899358601 45.013 2 -1.2649433917800785 0.38187587721974736 1.0 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 112836 18409 TLISFIFIY True PC9_epitope_Rep6 1115.6266838234299 1115.62558993586 83.457 2 -1.2649960638672806 0.3818834212067955 1.0 ['nc|ENSG00000188687|Q9BY07-7|SLC4A5', 'nc|ENSG00000188687|Q9BY07-4|SLC4A5', 'nc|ENSG00000188687|Q9BY07-8|SLC4A5', 'ENST00000451608.2_1_2:74452054-74542150:-|nuORF', 'ENSG00000188687|ENST00000394019|SLC4A5', 'nc|ENSG00000188687|Q9BY07|SLC4A5', 'nc|ENSG00000188687|Q9BY07-2|SLC4A5', 'nc|ENSG00000188687|Q9BY07-6|SLC4A5', 'nc|ENSG00000188687|Q9BY07-5|SLC4A5', 'ENST00000483195.5_1_2:74452054-74512997:-|nuORF'] 77232 19740 NRWDRLRILK True H1975_Epitope_Rep2 1368.81023611472 1368.80860490379 81.901 3 -1.2650184845138208 0.3818909650097026 1.0 ['ENSG00000205693|ENST00000381273|MANSC4'] 114179 10090 TPLAPASQ True PC9_epitope_Rep2 783.4126683059101 783.41211496793 44.145 1 -1.2651452854022955 0.38193046046449186 1.0 ['ENSG00000106351|ENST00000300176|AGFG2'] 85195 11004 QEPTRPQP True PC9_epitope_Rep3 951.4773938207898 951.47628993586 47.316 2 -1.2651590730523534 0.38193046046449186 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-2|XIRP1'] 80432 22622 PGKPYILTV True PC9_epitope_Rep1 986.5800679841799 986.57896993586 91.825 2 -1.265233048919698 0.38197461557237 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A'] 22141 5668 ESRRWRPERIP True PC9_epitope_Rep4 1480.8011279829998 1480.79947490379 28.608 3 -1.2653007520055493 0.38198037684272185 1.0 ['nc|ENSG00000167302|Q96N21|TEPSIN', 'ENSG00000167302|ENST00000637944|TEPSIN', 'nc|ENSG00000167302|Q96N21-2|TEPSIN'] 47547 23378 IVSVLFFKLW True PC9_epitope_Rep5 1250.74271663518 1250.7416099358602 94.908 2 -1.2653102144462653 0.38198037684272185 1.0 ['ENST00000361611.10_1_14:23495117-23495210:-|nuORF'] 83765 5614 PVHYQHGTGLS True PC9_epitope_Rep5 1194.5781704912201 1194.57652490379 26.597 3 -1.2653118162380672 0.38198037684272185 1.0 ['DRD3|p.Q144L|1|0.32|ENSG00000151577|chr3:114147510-114147510|T/A|missense_variant'] 44231 25667 IKKTPKKV True NCI_RA007_Epitope_Rep1 940.6433369470799 940.64222993586 106.23 2 -1.2653128401902631 0.38198037684272185 1.0 ['ENSG00000124575|ENST00000244534|H1-3'] 133231 20034 VVSSPNSTSRP True PC9_epitope_Rep1 1129.57275075761 1129.57164993586 81.888 2 -1.2654435241767168 0.38199546042515803 1.0 ['nc|ENSG00000055070|Q7Z422-5|SZRD1', 'ENSG00000055070|ENST00000401088|SZRD1', 'ENST00000472461.1_1_1:16694381-16721632:+|nuORF', 'nc|ENSG00000055070|Q7Z422-4|SZRD1', 'nc|ENSG00000055070|Q7Z422-3|SZRD1', 'nc|ENSG00000055070|Q7Z422-2|SZRD1'] 112542 7903 TLEDQALYNRL True NCI_RA007_Epitope_Rep3 1334.6830294825797 1334.6813849037899 38.198 3 -1.2654908323938248 0.38199546042515803 1.0 ['ENSG00000196839|ENST00000372874|ADA', 'ENST00000464097.5_1_20:43249631-43251634:-|nuORF', 'ENST00000492931.5_1_20:43248477-43251634:-|nuORF'] 130745 21049 VSWRAKAA True PC9_epitope_Rep5 887.4977353425497 887.49662993586 86.025 2 -1.2655089860124653 0.38199655891935425 1.0 ['ENST00000286355.9_1_8:132052932-132053124:-|nuORF'] 62263 14971 LLFLKLQP True NCI_RA007_Epitope_Rep5 970.6215388733399 970.62044993586 64.252 2 -1.2655130072936975 0.38199655891935425 1.0 ['ENST00000546740.5_1_12:89814932-89855458:-|nuORF'] 16890 14783 EFKQKYDYFRK True H1975_Epitope_Rep3 1550.7881632574597 1550.78706993586 62.242 2 -1.2655186495600257 0.38199655891935425 1.0 ['nc|ENSG00000049759|Q96PU5-3|NEDD4L', 'nc|ENSG00000049759|Q96PU5-2|NEDD4L', 'nc|ENSG00000049759|Q96PU5-6|NEDD4L', 'nc|ENSG00000049759|Q96PU5-5|NEDD4L', 'nc|ENSG00000049759|Q96PU5-7|NEDD4L', 'ENSG00000049759|ENST00000400345|NEDD4L', 'nc|ENSG00000049759|Q96PU5-9|NEDD4L', 'nc|ENSG00000049759|Q96PU5-4|NEDD4L'] 71502 5054 LYYKCGAQ True H1975_Epitope_Rep3 944.4425885351998 944.44148993586 24.562 2 -1.2655238564802394 0.38199655891935425 1.0 ['ABCB7|p.V655Sfs*30|1|0.1|ENSG00000131269|chrX:75060303-75060303|C/-|frameshift_variant', 'nc|ENSG00000131269|O75027-3|ABCB7', 'ENSG00000131269|ENST00000373394|ABCB7', 'nc|ENSG00000131269|O75027-2|ABCB7'] 36396 11937 GVFLFIFF True NCI_RA007_Epitope_Rep3 988.5422259234799 988.54112993586 54.081 2 -1.2655367359920993 0.38199655891935425 1.0 ['ENST00000275732.5_1_7:100279067-100279163:-|nuORF'] 103098 13702 SPHFDGWY True PC9_epitope_Rep1 1007.4137309350699 1007.41262993586 57.556 2 -1.2656181950286896 0.38200231834543347 1.0 ['ENSG00000205593|ENST00000413817|DENND6B', 'ENST00000495607.5_1_22:50750570-50752368:-|nuORF'] 91673 20149 RIVTTYIRER True PC9_epitope_Rep5 1305.7517181790897 1305.7500749037902 82.55 3 -1.2656333901230044 0.38200231834543347 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 118135 17807 TYILRWTVELI True PC9_epitope_Rep6 1405.79693703601 1405.79530490379 81.127 3 -1.2656377394956735 0.38200231834543347 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 15468 23237 EALQAAFLKMK True PC9_epitope_Rep5 1248.6900294393197 1248.6889299358602 94.365 2 -1.2656393174067346 0.38200231834543347 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2'] 25832 13011 FFFFFFFFFGY True H1975_Epitope_Rep2 1561.7110821537294 1561.7099899358602 55.165 2 -1.2657217438981105 0.3820220606178925 1.0 ['ENST00000379731.4_1_9:33111209-33111335:-|nuORF'] 124450 15839 VGVIIGKI True PC9_epitope_Rep4 797.5374748962099 797.53636993586 68.847 2 -1.2658227559530673 0.3820249396032114 1.0 ['ENSG00000124164|ENST00000475243|VAPB', 'ENST00000476395.1_1_20:57015848-57019288:+|nuORF', 'ENST00000463370.5_1_20:57007450-57019288:+|nuORF'] 2234 9153 AENEKLILEH True H1975_Epitope_Rep1 1194.6244519773 1194.62334993586 40.113 2 -1.2658309970168333 0.3820249396032114 1.0 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF', 'ENST00000503565.5_1_4:129797755-129812285:-|nuORF', 'nc|ENSG00000151466|Q96NL6-3|SCLT1', 'nc|ENSG00000151466|Q96NL6-2|SCLT1'] 132959 10696 VVPEMTEI True NCI_RA007_Epitope_Rep2 916.457569893 916.45646993586 46.205 2 -1.265844954369197 0.3820278184480234 1.0 ['ENST00000559973.5_1_15:76508902-76510013:-|nuORF', 'ENST00000560179.1_1_15:76508902-76518306:-|nuORF', 'nc|ENSG00000140374|P13804-2|ETFA', 'ENSG00000140374|ENST00000557943|ETFA'] 115813 13643 TSDQRYVLYP True H1975_Epitope_Rep1 1240.6088019131598 1240.6077099358602 57.61 2 -1.2658750331380448 0.3820278184480234 1.0 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000563908.1_1_15:72647792-72668286:-|nuORF'] 79406 6822 PATEYEISLNS True H1975_Epitope_Rep3 1222.5717476981 1222.57064993586 31.195 2 -1.265974180007006 0.3820515323052899 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.K1083Qfs*87|1|0.22|ENSG00000116147|chr1:175355505-175355506|-/G|frameshift_variant'] 59192 12164 LFDLIESMLEY True NCI_RA007_Epitope_Rep2 1371.6632055547902 1371.6621099358601 51.911 2 -1.2660076434200211 0.3820515323052899 1.0 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF', 'ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2'] 37935 4310 GYWYFMPPPP True H1975_Epitope_Rep2 1253.5579526406098 1253.55631490379 21.689 3 -1.266060260822632 0.3820515323052899 1.0 ['ENST00000431571.5_1_9:123906333-123914781:+|nuORF', 'ENST00000373851.6_1_9:123874787-123912836:+|nuORF', 'nc|ENSG00000119397|Q7Z7A1-2|CNTRL', 'nc|ENSG00000119397|Q7Z7A1-5|CNTRL', 'ENSG00000119397|ENST00000373855|CNTRL'] 34456 16731 GPKKTKRE True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 73.648 2 -1.266093125329294 0.3820515323052899 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 73129 18612 MRPLLRIC True H1975_Epitope_Rep1 1000.56741220884 1000.56630993586 77.618 2 -1.2660941308639095 0.3820515323052899 1.0 ['ENST00000229332.10_3_12:8276291-8276363:+|nuORF'] 116122 7661 TSSKSLPNFPN True H1975_Epitope_Rep3 1190.59315184902 1190.5920499358601 34.449 2 -1.266112640051076 0.3820515323052899 1.0 ['ENSG00000164530|ENST00000373674|PI16'] 16217 4456 EEELIFSNP True NCI_RA007_Epitope_Rep4 1076.50260550912 1076.5015099358602 23.514 2 -1.2661661455761044 0.3820515323052899 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 91160 319 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 1.7014 3 -1.266180764423652 0.3820515323052899 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 125643 24202 VKKTTCSA True NCI_RA007_Epitope_Rep2 836.4425885352 836.44148993586 101.64 2 -1.2662702312827758 0.38207127084629555 1.0 ['ENST00000432413.2_1_2:208104937-208105045:-|nuORF'] 47348 12087 IVGFVPRK True PC9_epitope_Rep5 914.5701720068199 914.5690699358599 51.487 2 -1.2662992375169109 0.38207345783676305 1.0 ['ENSG00000162694|ENST00000370114|EXTL2'] 34143 7606 GNCNWFCE True PC9_epitope_Rep3 971.32657280679 971.32546993586 34.254 2 -1.266306576874016 0.38207345783676305 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630'] 46268 13727 ISPFMNKFF True PC9_epitope_Rep2 1129.5630380210498 1129.5619499358602 58.09 2 -1.2663488722290734 0.38207345783676305 1.0 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000492709.5_1_20:30126008-30136787:+|nuORF', 'nc|ENSG00000101294|Q8TCT9-5|HM13'] 135659 25586 WLMVKIFL True PC9_epitope_Rep1 1048.61434531792 1048.6137749679299 103.43 1 -1.2663670574051602 0.38207345783676305 1.0 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5'] 70539 19164 LVYIAPMHLI True PC9_epitope_Rep6 1168.66783744276 1168.66674993586 86.365 2 -1.2663883493557577 0.38207345783676305 1.0 ['ENST00000452150.6_1_6:131161525-131161600:-|nuORF'] 13728 10855 DPVVADYK True H1975_Epitope_Rep3 905.44944773745 905.44834993586 46.836 2 -1.2664247168575502 0.38207345783676305 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 26616 12340 FILPAGILEHQ True NCI_RA007_Epitope_Rep4 1236.68665831104 1236.68500490379 54.465 3 -1.2664650192575926 0.38207345783676305 1.0 ['VPS13C|p.Q2593L|1|0.68|ENSG00000129003|chr15:61917618-61917618|T/A|missense_variant'] 66102 11505 LSEKQVSQLPV True NCI_RA007_Epitope_Rep2 1226.68705223386 1226.6859499358602 49.345 2 -1.2665367035745634 0.38207345783676305 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.N582Kfs*10|1|0.2|ENSG00000130827|chrX:154464228-154464229|-/A|frameshift_variant'] 33701 17862 GLHDREAFSVH True PC9_epitope_Rep2 1266.61053324866 1266.6088949037899 74.008 3 -1.2665683788836457 0.38207345783676305 1.0 ['ENSG00000214842|ENST00000399080|RAD51AP2'] 91447 9384 RHPREAGPNPS True NCI_RA007_Epitope_Rep5 1216.60611657456 1216.6050099358602 42.735 2 -1.2665705571244152 0.38207345783676305 1.0 ['ENSG00000137776|ENST00000380516|SLTM', 'nc|ENSG00000137776|Q9NWH9-3|SLTM', 'ENST00000558052.1_1_15:59175823-59179549:-|nuORF'] 12490 6410 DKEHIYDEQPP True H1975_Epitope_Rep1 1369.6150094924099 1369.6139099358602 29.715 2 -1.266600276560691 0.38209319346181997 1.0 ['nc|ENSG00000197822|Q16625-3|OCLN', 'ENSG00000197822|ENST00000396442|OCLN', 'nc|ENSG00000197822|Q16625-4|OCLN'] 123298 10424 VGLNIPKP True H1975_Epitope_Rep1 836.51198842436 836.51088993586 45.049 2 -1.2667028600950514 0.3821129286054086 1.0 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENSG00000134444|ENST00000644646|RELCH', 'nc|ENSG00000134444|Q9P260-2|RELCH'] 36400 17880 GVFLPAGI True PC9_epitope_Rep4 772.4483255386399 772.44722993586 76.815 2 -1.2667822645244118 0.38215705886658047 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 75297 12162 NIKKAQKLI True NCI_RA007_Epitope_Rep2 1054.68626438822 1054.6851699358601 51.903 2 -1.2667993873406427 0.38216459509898393 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 76090 23883 NMNGCTQK True H1975_Epitope_Rep3 894.36877197194 894.36822496793 99.58 1 -1.266815146121685 0.382172131147541 1.0 ['ENST00000394961.6_1_4:95170895-95171954:+|nuORF'] 126325 22995 VLIIILMIR True PC9_epitope_Rep6 1082.72495839606 1082.7238699358602 101.55 2 -1.2669443127238142 0.382223794306345 1.0 ['LRFN5|p.F544L|1|0.04|ENSG00000165379|chr14:41891496-41891496|C/G|missense_variant'] 13045 10603 DLNYSYAW True PC9_epitope_Rep2 1030.4396113297398 1030.43850993586 46.099 2 -1.2669698979861812 0.382223794306345 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 38161 13654 HDHLELFLKM True PC9_epitope_Rep1 1281.65397828377 1281.65288993586 57.375 2 -1.2669896892432655 0.3822313293570932 1.0 ['ENSG00000168152|ENST00000302236|THAP9'] 116192 18263 TSVQLLQRL True PC9_epitope_Rep1 1056.6291434349198 1056.6280499358602 75.039 2 -1.2670630979109085 0.3822342021490688 1.0 ['ABCB5|p.S1057T|1|0.31|ENSG00000004846|chr7:20743022-20743022|G/C|missense_variant', 'nc|ENSG00000004846|Q2M3G0-1|ABCB5', 'ENSG00000004846|ENST00000404938|ABCB5'] 11151 23764 DDHYRTGTRF True NCI_RA007_Epitope_Rep5 1266.57414773994 1266.57250490379 98.756 3 -1.2670634334467206 0.3822342021490688 1.0 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 96943 8969 SAVTLAPASL True PC9_epitope_Rep5 928.52294703088 928.52184993586 39.442 2 -1.2671682306694623 0.382253933406513 1.0 ['ENST00000546727.5_1_12:113538464-113545121:-|nuORF'] 27674 23478 FPGYPIHV True NCI_RA007_Epitope_Rep3 928.4806882960798 928.47958993586 101.89 2 -1.2672427527357255 0.3822690018538394 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L'] 82235 20953 PPCFPLCL True PC9_epitope_Rep6 888.42376766692 888.42266993586 93.385 2 -1.2672467523145081 0.3822690018538394 1.0 ['ENST00000491241.1_1_1:33476368-33477090:-|nuORF'] 10997 8002 DALQQIWEIAR True H1975_Epitope_Rep1 1341.70409928033 1341.70246490379 35.723 3 -1.2672919832489404 0.38227653580183674 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7668832-7673976:+|nuORF'] 21730 16648 ERTHKNLSDME True H1975_Epitope_Rep2 1358.6248629834597 1358.62376993586 69.267 2 -1.2673186425936154 0.3822840695660658 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 135338 18183 WGLAAGGG True H1975_Epitope_Rep2 687.33402406239 687.3334749679301 75.371 1 -1.267336953776983 0.3823037990121349 1.0 ['nc|ENSG00000183688|Q8N5W9|RFLNB'] 84500 17343 QALWFWDSMLK True H1975_Epitope_Rep1 1423.69584309575 1423.69474993586 72.176 2 -1.267339446723427 0.38231133226011027 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6'] 80641 22747 PGSIRKPPN True PC9_epitope_Rep4 964.54541381096 964.54430993586 95.715 2 -1.2673550799741136 0.3823188653243411 1.0 ['ENSG00000132478|ENST00000589666|UNK'] 82270 20303 PPGGGSGG True NCI_RA007_Epitope_Rep2 584.25543938852 584.25489496793 84.004 1 -1.2673663664528623 0.3823385936242347 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.P569L|1|0.27|ENSG00000169047|chr2:226797033-226797033|G/A|missense_variant'] 104877 13105 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 57.088 2 -1.2674098112424566 0.3823536585365854 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 65772 16556 LSDFRRRRSFR True H1975_Epitope_Rep1 1494.8280114371798 1494.8269099358602 69.057 2 -1.2674270816322337 0.3823536585365854 1.0 ['ENSG00000171522|ENST00000302472|PTGER4', 'ENST00000513635.1_1_5:40681836-40685490:+|nuORF'] 122835 7595 VGGTSPREGVV True PC9_epitope_Rep6 1056.55637241748 1056.55526993586 38.492 2 -1.2674351467578524 0.3823611907171864 1.0 ['nc|ENSG00000138744|Q02083-2|NAAA', 'ENSG00000138744|ENST00000286733|NAAA'] 58336 24412 LEMTVWVPKL True PC9_epitope_Rep2 1214.67331674602 1214.67220993586 99.47 2 -1.267496300236314 0.3823640598514689 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 46501 7565 ISVSNLFM True H1975_Epitope_Rep3 909.46298962661 909.46188993586 34.08 2 -1.2675055367039556 0.3823640598514689 1.0 ['ENSG00000205213|ENST00000379214|LGR4', 'nc|ENSG00000205213|Q9BXB1-2|LGR4'] 5159 11320 ALLSEFLKR True PC9_epitope_Rep6 1075.6389798426299 1075.6378899358601 54.562 2 -1.2675893912024774 0.3823719472792226 1.0 ['ENSG00000065615|ENST00000369681|CYB5R4'] 136093 14740 WRLLGLGV True H1975_Epitope_Rep3 912.5545219426798 912.55342993586 62.073 2 -1.2675922230261982 0.3823719472792226 1.0 ['ENST00000445174.5_1_2:216480087-216485873:-|nuORF'] 10450 10591 CIAMLVEQL True PC9_epitope_Rep4 1018.51912460374 1018.51802993586 48.48 2 -1.2676731360637288 0.3823719472792226 1.0 ['nc|ENSG00000114654|Q9HA90|EFCC1', 'ENSG00000114654|ENST00000683648|EFCC1', 'nc|ENSG00000114654|Q9HA90-2|EFCC1', 'ENST00000481536.2_1_3:128749483-128758688:+|nuORF'] 11522 23644 DFLLRQRRRSS True PC9_epitope_Rep4 1432.801127983 1432.79947490379 99.29 3 -1.2676736548563554 0.3823719472792226 1.0 ['ENSG00000237441|ENST00000497454|RGL2', 'ENST00000483151.5_1_6:33259881-33261471:-|nuORF'] 16952 19317 EFSISSNIIQF True PC9_epitope_Rep1 1283.63976768827 1283.6386699358602 79.108 2 -1.2677021616157322 0.3823719472792226 1.0 ['ENSG00000180332|ENST00000379108|KCTD4'] 94288 17325 RRRHAFRRQA True NCI_RA007_Epitope_Rep3 1352.77625064784 1352.77514993586 76.029 2 -1.2677356835862668 0.3823719472792226 1.0 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 126999 17483 VLRSWWPRWWW True PC9_epitope_Rep5 1656.8466216234397 1656.8449649037902 72.25 3 -1.2677634126490467 0.3823719472792226 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 142838 9629 YYSSPAQQVP True PC9_epitope_Rep4 1138.5294889633 1138.52838993586 44.661 2 -1.2678147476840627 0.3823719472792226 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 9291 15092 AVQELVHPV True PC9_epitope_Rep5 990.5498304850599 990.54872993586 63.057 2 -1.2678278687505116 0.3823719472792226 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 141483 14573 YTIPEEDR True PC9_epitope_Rep1 1021.47163973401 1021.47107496793 60.879 1 -1.2678565442496794 0.3823719472792226 1.0 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7-AKIP1|1|fusion', 'IPO7-AKIP1|2|fusion', 'IPO7-AKIP1|4|fusion', 'IPO7-AKIP1|3|fusion'] 84227 22755 PYLLFIGLL True PC9_epitope_Rep5 1047.63685458431 1047.63627496793 92.527 1 -1.2678634438533698 0.3823719472792226 1.0 ['ENST00000374242.8_1_9:115449350-115449677:-|nuORF'] 18585 10189 EKQNSAYNMHS True H1975_Epitope_Rep3 1307.55644907047 1307.55481490379 44.237 3 -1.2678738387653177 0.3823719472792226 1.0 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A'] 80510 7598 PGPAQERYLL True NCI_RA007_Epitope_Rep4 1142.6084079903399 1142.60730993586 35.877 2 -1.2679105022994779 0.3823719472792226 1.0 ['ENST00000316341.7_1_16:67978295-67978643:-|nuORF'] 25260 16178 FDLGGDTF True PC9_epitope_Rep5 870.3759484440201 870.37484993586 67.218 2 -1.2679136300866685 0.3823719472792226 1.0 ['HSPA8|p.G203D|1|0.29|ENSG00000109971|chr11:123059985-123059985|C/T|missense_variant'] 67106 14510 LSQKPKKKHNF True NCI_RA007_Epitope_Rep2 1353.7881036878096 1353.7870099358602 61.104 2 -1.2679346890057572 0.38237481559150927 1.0 ['nc|ENSG00000168967|Q16048|PMCHL1'] 107262 4777 SVLAELRR True NCI_RA007_Epitope_Rep5 942.5610638751 942.55996993586 25.058 2 -1.267960155989987 0.38237481559150927 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 13948 4848 DRAVINTV True PC9_epitope_Rep6 886.4872302285 886.48612993586 26.158 2 -1.2680836649459792 0.3823909492112257 1.0 ['nc|ENSG00000185973|Q9NVH6-7|TMLHE', 'nc|ENSG00000185973|Q9NVH6-6|TMLHE', 'nc|ENSG00000185973|Q9NVH6-5|TMLHE', 'ENSG00000185973|ENST00000334398|TMLHE', 'nc|ENSG00000185973|Q9NVH6-8|TMLHE'] 139761 22894 YPEPIYPTL True H1975_Epitope_Rep1 1091.55391280599 1091.55280993586 95.211 2 -1.2681467394748418 0.3823909492112257 1.0 ['ENSG00000185002|ENST00000332958|RFX6'] 44640 6038 ILSGFLYPFP True NCI_RA007_Epitope_Rep2 1152.6219327961599 1152.62082993586 28.091 2 -1.2681561264357442 0.3823909492112257 1.0 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 122680 9871 VGGFKQSV True PC9_epitope_Rep2 820.4443027873599 820.44320993586 43.304 2 -1.268174170103195 0.3823909492112257 1.0 ['KCNS3|p.Y83Lfs*32|1|0.21|ENSG00000170745|chr2:17931250-17931251|-/T|frameshift_variant', 'KCNS3|p.R311Sfs*11|1|0.28|ENSG00000170745|chr2:17931937-17931941|TTCGG/-|frameshift_variant', 'ENSG00000170745|ENST00000304101|KCNS3'] 142265 12613 YWYNYEILKKW True PC9_epitope_Rep5 1604.8027506924395 1604.8011149037898 53.518 3 -1.2682397855135943 0.3823909492112257 1.0 ['ENSG00000075303|ENST00000341119|SLC25A40'] 29990 10459 FWWLSQHQCWL True NCI_RA007_Epitope_Rep5 1532.70232545852 1532.70122993586 46.863 2 -1.2682845622405332 0.3823909492112257 1.0 ['ENST00000420798.6_2_X:54956297-54956465:+|nuORF'] 64013 16458 LPAAGRRA True NCI_RA007_Epitope_Rep2 810.48241963158 810.48187496793 68.746 1 -1.2682914632960987 0.3823909492112257 1.0 ['ENST00000586220.1_1_19:28284944-28285022:+|nuORF'] 61166 9383 LIKSAYEEQRI True H1975_Epitope_Rep1 1348.73506505544 1348.7339699358602 41.002 2 -1.268344672455022 0.3823995513945777 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 117507 20659 TVRQLKLFF True PC9_epitope_Rep3 1150.6862643882198 1150.6851699358601 84.738 2 -1.2683566678500349 0.3823995513945777 1.0 ['LRBA|p.E168Q|1|0.09|ENSG00000198589|chr4:150928563-150928563|C/G|missense_variant'] 81670 21619 PLLPWPPAL True PC9_epitope_Rep1 1002.5902387450599 1002.58914993586 87.983 2 -1.2683671958809906 0.3823995513945777 1.0 ['ENST00000389341.9_1_19:42594426-42594810:-|nuORF'] 23459 7784 EVTNKNGTNL True PC9_epitope_Rep2 1088.5462016566 1088.5451099358602 35.314 2 -1.2683948947495092 0.3823995513945777 1.0 ['FRMPD1|p.V1124L|1|0.19|ENSG00000070601|chr9:37745402-37745402|G/T|missense_variant'] 86592 12554 QLEEDYRERGR True H1975_Epitope_Rep1 1449.6960537777697 1449.6949499358602 53.333 2 -1.2684425258016645 0.3823995513945777 1.0 ['ENST00000406316.6_3_2:51255552-51255684:-|nuORF'] 113531 9764 TLTMIPMLR True PC9_epitope_Rep6 1074.5929582503397 1074.5918699358601 47.995 2 -1.268473184993801 0.3823995513945777 1.0 ['ENST00000221448.9_1_19:49593578-49601899:+|nuORF'] 74665 24216 NGNGHEHC True PC9_epitope_Rep2 866.3089485967 866.30784993586 98.686 2 -1.2685042109224438 0.3824052854844215 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 43230 24562 IFKRLKSFICP True NCI_RA007_Epitope_Rep5 1350.7845985304998 1350.7835099358601 101.95 2 -1.2685350178980215 0.3824052854844215 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 113154 11110 TLPPDLKA True PC9_epitope_Rep1 853.49091862661 853.48982993586 47.62 2 -1.268547567264463 0.3824052854844215 1.0 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 65696 20547 LSASRHWQEL True PC9_epitope_Rep1 1225.62036965637 1225.61926993586 83.846 2 -1.2685756010435625 0.3824052854844215 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF'] 91159 255 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 1.365 3 -1.2686742516219602 0.382440058996331 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 110018 10065 TEKADIKPV True PC9_epitope_Rep2 999.5600608155898 999.55896993586 44.046 2 -1.2687179560422497 0.382440058996331 1.0 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12', 'nc|ENSG00000109118|Q96QT6-4|PHF12'] 46911 10361 ITNATEYAR True PC9_epitope_Rep1 1037.5141732523298 1037.5130699358601 44.736 2 -1.2687279767691337 0.382440058996331 1.0 ['HTR1E|p.I128T|1|0.39|ENSG00000168830|chr6:87015717-87015717|T/C|missense_variant'] 78694 9891 NYYSTLSFT True PC9_epitope_Rep6 1094.49204082542 1094.49094993586 48.547 2 -1.2688231581385103 0.3824963432471965 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 113207 8703 TLQGPEKEPLK True H1975_Epitope_Rep3 1238.6870522338597 1238.6859499358602 38.475 2 -1.2688441794481446 0.38249920772287366 1.0 ['ENST00000376962.9_1_9:74978427-74979660:-|nuORF'] 141917 5703 YVETNEELIP True H1975_Epitope_Rep3 1205.58158410581 1205.5804899358602 26.968 2 -1.2688601016822163 0.38249920772287366 1.0 ['ENSG00000129951|ENST00000520876|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-2|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-3|PLPPR3'] 62996 14306 LLPPIHTY True H1975_Epitope_Rep1 952.5382031721999 952.53710993586 60.215 2 -1.2689086099063271 0.3825189230037907 1.0 ['ENST00000478553.1_1_20:4763250-4763406:-|nuORF'] 124784 6248 VHDWLYYYAYK True PC9_epitope_Rep5 1519.7136013348702 1519.71196490379 29.011 3 -1.269233152187042 0.382575203549315 1.0 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 89987 21256 RDKVLGYF True PC9_epitope_Rep3 996.5392658013599 996.53816993586 87.055 2 -1.2692852066353078 0.38258092823712947 1.0 ['ENSG00000213199|ENST00000349064|ASIC3', 'nc|ENSG00000213199|Q9UHC3-2|ASIC3', 'nc|ENSG00000213199|Q9UHC3-3|ASIC3'] 73428 8007 MTVEVEGSTV True PC9_epitope_Rep6 1050.49032657326 1050.48922993586 40.269 2 -1.2692920183038283 0.38258092823712947 1.0 ['nc|ENSG00000131016|Q02952-3|AKAP12', 'nc|ENSG00000131016|Q02952-2|AKAP12', 'ENSG00000131016|ENST00000402676|AKAP12'] 8595 7000 ATWKRLET True PC9_epitope_Rep1 1003.5450794577898 1003.5439899358599 31.73 2 -1.2692996403998802 0.38258092823712947 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|47|2|sense'] 79585 6289 PDIAAEYR True PC9_epitope_Rep1 933.45559574705 933.45448993586 29.003 2 -1.2693163393929607 0.38258092823712947 1.0 ['ASPM|p.N2760Kfs*12|1|0.17|ENSG00000066279|chr1:197100971-197100972|-/T|frameshift_variant', 'ASPM|p.K3381Rfs*32|1|0.54|ENSG00000066279|chr1:197088275-197088275|T/-|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 93660 12253 RQRRATPPA True H1975_Epitope_Rep1 1051.5999089953098 1051.5988099358601 52.154 2 -1.2693256682630085 0.38258845324135576 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 43125 10094 IEYRLHEMDRQ True NCI_RA007_Epitope_Rep1 1488.7143466942 1488.7132499358602 43.273 2 -1.2693929585438393 0.3826035026995405 1.0 ['ENSG00000103657|ENST00000443617|HERC1'] 68651 14404 LTIPTARSL True PC9_epitope_Rep4 970.58113061334 970.58002993586 63.315 2 -1.2694065545850912 0.3826035026995405 1.0 ['RBP3|p.V1198L|1|0.26|ENSG00000265203|chr10:47357305-47357305|G/C|missense_variant'] 107903 6287 SVVRFDKDERE True H1975_Epitope_Rep1 1378.6840921117398 1378.6829899358602 29.25 2 -1.2695553103532338 0.3826307386689091 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant'] 124899 23120 VHPLVYCP True PC9_epitope_Rep2 926.46840936022 926.46730993586 94.422 2 -1.269591401379619 0.3826307386689091 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000525068.1_1_20:57288807-57289834:+|nuORF', 'ENST00000529976.5_1_20:57288690-57289536:+|nuORF'] 5457 20461 ALVPDELLK True PC9_epitope_Rep6 996.5855472874399 996.58444993586 91.418 2 -1.2697815824961136 0.38264864667243503 1.0 ['ENSG00000086015|ENST00000361297|MAST2', 'nc|ENSG00000086015|Q6P0Q8-2|MAST2'] 12879 12985 DLIGCQRL True PC9_epitope_Rep1 916.4800366730799 916.47892993586 54.818 2 -1.2698225662440628 0.38264864667243503 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'ENST00000463634.6_1_6:4056876-4060847:+|nuORF'] 56832 16426 LDNWHQRL True PC9_epitope_Rep1 1080.54647644012 1080.5453699358602 68.006 2 -1.2698476314198381 0.38264864667243503 1.0 ['ENST00000608819.1_1_7:134853249-134853303:+|nuORF'] 123305 13936 VGLPLGLSAG True H1975_Epitope_Rep3 882.51746772762 882.51636993586 58.918 2 -1.2698548613539575 0.38264864667243503 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'nc|ENSG00000250510|Q16538-2|GPR162'] 120322 7076 VEEADVDMEPN True H1975_Epitope_Rep2 1246.50234780894 1246.5012499358602 32.148 2 -1.2699189264416937 0.38267873898685123 1.0 ['INTS2|p.C1022Vfs*6|1|0.19|ENSG00000108506|chr17:61869372-61869372|T/-|frameshift_variant', 'ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2', 'INTS2|p.N751Kfs*18|1|0.17|ENSG00000108506|chr17:61881032-61881033|-/T|frameshift_variant', 'INTS2|p.N965Kfs*64|1|0.03|ENSG00000108506|chr17:61869896-61869897|-/TT|frameshift_variant'] 54606 23931 KYKWYLKKLVF True PC9_epitope_Rep2 1514.9013425348996 1514.90024993586 97.53 2 -1.269963680612502 0.38267873898685123 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 80846 20242 PHRNLQFL True PC9_epitope_Rep2 1023.5613982282699 1023.5603099358599 83.281 2 -1.2699991542954097 0.38267873898685123 1.0 ['ENST00000442697.6_1_4:100821242-100821344:-|nuORF'] 122783 5343 VGGPEIEVGCS True PC9_epitope_Rep3 1045.4750108622898 1045.47390993586 25.629 2 -1.2700053529201092 0.38267873898685123 1.0 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 9396 3510 AVSVLGSGLGL True NCI_RA007_Epitope_Rep4 971.5651461960299 971.56404993586 19.48 2 -1.270083757779189 0.3826984475152933 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 3478 6900 AGLFFLFFVR True H1975_Epitope_Rep3 1215.68045073179 1215.67934993586 31.5 2 -1.2701107428640663 0.3827041649404138 1.0 ['ENSG00000143653|ENST00000366510|SCCPDH'] 62878 24478 LLNGKKRRRWI True PC9_epitope_Rep4 1438.8997198254597 1438.89862993586 102.64 2 -1.2701256396950165 0.3827041649404138 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 20861 10803 EQLAYHHHDW True H1975_Epitope_Rep3 1334.5792331203802 1334.57812993586 46.633 2 -1.270167093191129 0.3827041649404138 1.0 ['ENSG00000073464|ENST00000380833|CLCN4', 'nc|ENSG00000073464|P51793-2|CLCN4'] 61788 16204 LLAPVAAPA True H1975_Epitope_Rep3 821.5010893874899 821.5005449679301 67.785 1 -1.2701971689966989 0.3827041649404138 1.0 ['ENSG00000118849|ENST00000237696|RARRES1', 'ENST00000498640.1_1_3:158422689-158450240:-|nuORF', 'nc|ENSG00000118849|P49788-2|RARRES1'] 34221 20193 GNLIVHQRIH True NCI_RA007_Epitope_Rep4 1185.67307393557 1185.67196993586 87.373 2 -1.2702092557454314 0.3827116867924988 1.0 ['ENSG00000256683|ENST00000243644|ZNF350', 'nc|ENSG00000176024|Q6PF04-2|ZNF613', 'ENSG00000176024|ENST00000293471|ZNF613'] 99904 10434 SIMEEVLIPDQ True H1975_Epitope_Rep1 1272.62715439924 1272.62604993586 45.088 2 -1.2702324728222412 0.382719208461276 1.0 ['ENSG00000005812|ENST00000355619|FBXL3'] 56611 17564 LDHVNVYY True PC9_epitope_Rep3 1021.48689587533 1021.48578993586 72.746 2 -1.270260059993497 0.38272206652857316 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 128952 20821 VQIIKPLP True H1975_Epitope_Rep3 906.5902387450599 906.58914993586 86.977 2 -1.2702732649283002 0.38272206652857316 1.0 ['ENSG00000154447|ENST00000284637|SH3RF1', 'SH3RF1|p.S448Cfs*15|1|0.21|ENSG00000154447|chr4:169122103-169122104|CT/-|frameshift_variant', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 20323 15087 ENVEKLKNA True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 65.965 2 -1.2703248155878075 0.38272778224529086 1.0 ['ENST00000262160.10_3_18:45352587-45352647:-|nuORF'] 82608 23286 PQEPPKFP True H1975_Epitope_Rep3 938.4861675993399 938.48506993586 97.217 2 -1.2703321028924728 0.38272778224529086 1.0 ['nc|ENSG00000144504|Q9P2S6-4|ANKMY1', 'nc|ENSG00000144504|Q9P2S6-2|ANKMY1', 'nc|ENSG00000144504|Q9P2S6|ANKMY1', 'ENSG00000144504|ENST00000401804|ANKMY1', 'ENST00000484526.5_1_2:241463300-241500177:-|nuORF', 'ENST00000480230.5_1_2:241463300-241465350:-|nuORF', 'ENST00000459901.5_1_2:241463300-241492642:-|nuORF', 'nc|ENSG00000144504|Q9P2S6-3|ANKMY1'] 56047 6264 LASTLEPP True NCI_RA007_Epitope_Rep2 826.44363408102 826.44252993586 28.97 2 -1.270335403894113 0.38272778224529086 1.0 ['ENSG00000167595|ENST00000646935|PROSER3'] 120699 12851 VEKEREAYRRR True PC9_epitope_Rep5 1490.8066072862598 1490.80495490379 54.441 3 -1.2703496800603133 0.38272778224529086 1.0 ['ENSG00000164366|ENST00000296824|CCDC127'] 46383 17240 ISRWFEVERRE True PC9_epitope_Rep5 1505.77391017565 1505.77280993586 71.33 2 -1.2705224372765986 0.38277185501066097 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 112571 14063 TLEKKIHELEK True PC9_epitope_Rep6 1366.78201524786 1366.78036490379 65.967 3 -1.2705728920718262 0.3827747115513481 1.0 ['FMNL2|p.L1058Qfs*20|1|0.19|ENSG00000157827|chr2:152647799-152647800|TT/-|frameshift_variant', 'nc|ENSG00000157827|Q96PY5|FMNL2', 'ENSG00000157827|ENST00000288670|FMNL2'] 13868 14194 DQSAYVSAI True PC9_epitope_Rep3 952.4501760134399 952.44906993586 59.682 2 -1.2705754263356817 0.3827747115513481 1.0 ['ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'nc|ENSG00000290798|Q9H1B4-5|NXF5', 'nc|ENSG00000290798|Q9H1B4-4|NXF5', 'nc|ENSG00000290798|Q9H1B4-6|NXF5', 'nc|ENSG00000290798|Q9H1B4-2|NXF5', 'nc|ENSG00000290798|Q9H1B4|NXF5'] 52802 10448 KNSELRCY True H1975_Epitope_Rep2 1011.4807649490699 1011.47966993586 45.203 2 -1.270651234245588 0.3828187821340676 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 68958 13210 LTPELLKILHS True H1975_Epitope_Rep1 1262.7598232512998 1262.7587299358602 55.909 2 -1.2707496270156877 0.3828405754729623 1.0 ['ENST00000510450.1_1_3:125688183-125696014:+|nuORF', 'ENSG00000114547|ENST00000514116|ROPN1B', 'ENSG00000065371|ENST00000405845|ROPN1'] 125675 23934 VKLNLALA True NCI_RA007_Epitope_Rep3 840.5432885526399 840.54274496793 103.7 1 -1.2708311308957954 0.3828405754729623 1.0 ['nc|ENSG00000186919|Q401N2-2|ZACN', 'ZACN|p.L253Cfs*10|1|0.1|ENSG00000186919|chr17:76081626-76081626|G/-|frameshift_variant', 'ENSG00000186919|ENST00000334586|ZACN'] 104875 12613 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 55.168 2 -1.2708697866023941 0.3828405754729623 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 129605 25764 VRPAGPAA True H1975_Epitope_Rep2 737.41842239269 737.4178749679301 105.78 1 -1.270923395889393 0.3828405754729623 1.0 ['ENST00000263511.8_1_1:16802353-16802998:-|nuORF'] 61449 22903 LIYAISATVF True PC9_epitope_Rep5 1096.61684741572 1096.61574993586 93.094 2 -1.270955800350974 0.3828405754729623 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 418 19689 AALIVLTE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 82.646 2 -1.2709664327303407 0.3828405754729623 1.0 ['nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 2880 19158 AEVKELKKQL True PC9_epitope_Rep5 1184.7128730588797 1184.71176993586 78.728 2 -1.2709727640426898 0.3828405754729623 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 98819 20672 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 85.622 2 -1.2709763365446245 0.3828405754729623 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 30820 12151 GAPCVCGK True H1975_Epitope_Rep1 733.3251162548099 733.3245649679301 51.756 1 -1.2709814370367596 0.3828405754729623 1.0 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 105324 23547 SRPPGGGG True PC9_epitope_Rep4 683.3350866915499 683.33453496793 98.879 1 -1.2710290968345677 0.3828405754729623 1.0 ['ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 80946 14018 PIEFNHRPLL True H1975_Epitope_Rep3 1234.6822416369398 1234.68114993586 59.241 2 -1.271046289095013 0.3828405754729623 1.0 ['ENSG00000185972|ENST00000335119|CCIN'] 81259 18528 PKRITTRHK True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.69327496793 78.094 1 -1.271071191414773 0.38285380173946937 1.0 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A'] 98777 20049 SGHVSLCWRP True NCI_RA007_Epitope_Rep4 1140.5498475683999 1140.54820490379 86.706 3 -1.2710915294486125 0.38285380173946937 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 30789 13525 GAMKPGGF True PC9_epitope_Rep6 763.3686953189499 763.36758993586 63.751 2 -1.2711082838604 0.38285380173946937 1.0 ['ENST00000455406.5_1_1:71557353-71688756:+|nuORF'] 70214 10635 LVQIPIFFFTV True PC9_epitope_Rep4 1322.7638460025798 1322.76274993586 48.657 2 -1.2711128657960722 0.38285380173946937 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 36758 23390 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 95.251 2 -1.2713173810897673 0.38285380173946937 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'CFAP43|p.L1055Wfs*44|1|0.12|ENSG00000197748|chr10:104164177-104164177|G/-|frameshift_variant'] 78690 12083 NYYSTLSFT True PC9_epitope_Rep3 1094.49204082542 1094.49094993586 51.52 2 -1.2713184876973487 0.38286131920336197 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 39860 11567 HPAEWRLAL True NCI_RA007_Epitope_Rep3 1091.58761297611 1091.58650993586 52.628 2 -1.2713610004029465 0.3828810173455467 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 4934 21169 ALGCCVRCLL True PC9_epitope_Rep4 1049.51841341109 1049.51730993586 89.59 2 -1.2714185517284624 0.38288853429479763 1.0 ['ENST00000357060.7_2_10:105990583-105992116:-|nuORF'] 36753 12096 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 53.525 2 -1.27146766128049 0.38290746108688767 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 35363 23405 GRYSNRLYT True NCI_RA007_Epitope_Rep5 1128.5676058075198 1128.56596490379 97.32 3 -1.271491934512549 0.38290746108688767 1.0 ['ENSG00000173467|ENST00000310398|AGR3'] 20445 20071 EPGPPKPGV True PC9_epitope_Rep1 876.4705175352 876.46942993586 82.03 2 -1.2715185978273098 0.38290746108688767 1.0 ['ENSG00000125826|ENST00000356286|RBCK1', 'nc|ENSG00000125826|Q9BYM8-3|RBCK1', 'nc|ENSG00000125826|Q9BYM8-4|RBCK1', 'ENST00000382181.2_2_20:389382-402830:+|nuORF'] 139765 10195 YPEYLSNFP True H1975_Epitope_Rep2 1128.51277627 1128.51112490379 44.219 3 -1.2715268038166847 0.38290746108688767 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 13620 8369 DPITKSASQV True H1975_Epitope_Rep2 1044.54513902744 1044.5440499358601 37.144 2 -1.271538549509796 0.38290746108688767 1.0 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2'] 53872 13985 KTKGAGGG True H1975_Epitope_Rep3 674.3711378470998 674.3705849679301 59.112 1 -1.27154342573685 0.38290746108688767 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 42070 9550 IDKWDLIK True NCI_RA007_Epitope_Rep5 1029.5858816406098 1029.58478993586 43.371 2 -1.2715770936095159 0.38290746108688767 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|62|2|sense', 'L1PA4_dup9334|chr12:12409221-12411354:-|1.3393414808808248|0.0111968938891953|6.9|450.0|25|2|sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|178|3|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|9|1|sense', 'chr3:98867438-98881540|151|18.55|0.23|6.34|-|1|TE_info:L1PA5,L1PA5_dup2059,L1,LINE,acceptor,-,98865721,98867438|None,DCBLD2|4', 'L1PA3_dup1115|chr2:110017555-110020014:+|1.8409101932023448|0.4680770941019235|1.98|537.0|62|3|sense', 'L1PA3_dup1120|chr2:110351377-110353837:-|1.2372248013512652|0.4358200479832063|1.51|529.0|67|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|163|3|sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|45|1|sense', 'nc|ENSG999|O00370|L1_ORF2', 'L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|142|3|sense'] 66927 6508 LSNRYMQVWFS True NCI_RA007_Epitope_Rep1 1429.68125566077 1429.67959490379 29.33 3 -1.2715799275062558 0.38290746108688767 1.0 ['ENST00000559374.1_1_15:91454636-91455656:+|nuORF', 'nc|ENSG00000196547|P49641-2|MAN2A2', 'nc|ENSG00000196547|P49641-1|MAN2A2', 'ENSG00000196547|ENST00000559717|MAN2A2'] 53485 11903 KRIDNLLKYFY True NCI_RA007_Epitope_Rep5 1471.81873510975 1471.8170849037901 52.442 3 -1.2715936291459489 0.38290746108688767 1.0 ['ENST00000477822.2_1_6:153291978-153292182:-|nuORF'] 12807 20008 DLFLTNQF True PC9_epitope_Rep5 996.4916469025999 996.49054993586 82.015 2 -1.2716937883429626 0.3829665444713734 1.0 ['nc|ENSG00000085831|Q5SRH9-3|TTC39A', 'ENSG00000085831|ENST00000680483|TTC39A', 'nc|ENSG00000085831|Q5SRH9-6|TTC39A', 'nc|ENSG00000085831|Q5SRH9-4|TTC39A', 'nc|ENSG00000085831|Q5SRH9|TTC39A'] 83396 23114 PTKQNLSVSLV True PC9_epitope_Rep3 1184.6764875501601 1184.67484490379 94.175 3 -1.271700642759328 0.3829665444713734 1.0 ['ENST00000334398.7_1_X:154721001-154721139:-|nuORF'] 98389 15675 SFASPNMHSV True PC9_epitope_Rep1 1075.47567956863 1075.4745899358602 65.116 2 -1.27170147013217 0.3829665444713734 1.0 ['ZNF462|p.V2246Ffs*24|1|0.05|ENSG00000148143|chr9:106974177-106974177|G/-|frameshift_variant', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462'] 82646 25511 PQLPPALAL True PC9_epitope_Rep3 918.5538532363399 918.5533049679301 103.59 1 -1.2719411547811061 0.38299841675800755 1.0 ['ENST00000560821.1_1_15:91352032-91358506:+|nuORF'] 31358 16251 GDRDENSFSL True PC9_epitope_Rep5 1138.4890807033 1138.48798993586 67.498 2 -1.271969347362593 0.3829986727226234 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 56208 10689 LCATETPSWRM True PC9_epitope_Rep2 1293.58457839461 1293.5834899358601 46.428 2 -1.2719760700119094 0.3829986727226234 1.0 ['ENST00000496455.6_1_3:155588441-155611400:+|nuORF'] 98778 20440 SGHVSLCWRP True NCI_RA007_Epitope_Rep4 1140.5498475683999 1140.54820490379 88.502 3 -1.2720136248593967 0.3829986727226234 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 65471 21580 LRKRKQPPTT True PC9_epitope_Rep6 1223.7462388758297 1223.7445949037901 95.883 3 -1.2720639297835319 0.3829986727226234 1.0 ['ENSG00000204406|ENST00000642680|MBD5', 'nc|ENSG00000204406|Q9P267|MBD5', 'nc|ENSG00000204406|Q9P267-2|MBD5'] 83418 9026 PTLRSMIE True PC9_epitope_Rep1 945.49535238405 945.49424993586 39.568 2 -1.2720649855677748 0.3829986727226234 1.0 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 125289 24157 VILVFFPLIAH True PC9_epitope_Rep2 1267.7692657361902 1267.7676149037902 98.445 3 -1.2720898264257008 0.3829986727226234 1.0 ['ENSG00000012232|ENST00000220562|EXTL3'] 64542 6608 LPRRPTVESHH True H1975_Epitope_Rep1 1327.71091599627 1327.70926490379 30.474 3 -1.2720976955469563 0.3829986727226234 1.0 ['ENST00000542540.5_1_12:121708713-121712128:-|nuORF', 'ENST00000535524.1_1_12:121691250-121712353:-|nuORF', 'nc|ENSG00000110931|Q96RR4-6|CAMKK2', 'nc|ENSG00000110931|Q96RR4-5|CAMKK2', 'nc|ENSG00000110931|Q96RR4-2|CAMKK2', 'nc|ENSG00000110931|Q96RR4-3|CAMKK2', 'nc|ENSG00000110931|Q96RR4-4|CAMKK2', 'nc|ENSG00000110931|Q96RR4-7|CAMKK2', 'ENSG00000110931|ENST00000404169|CAMKK2'] 56360 14731 LDDLLQRLHHN True NCI_RA007_Epitope_Rep2 1372.7211463268 1372.72004993586 61.972 2 -1.2721424526866663 0.3829986727226234 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 74669 22289 NGNGHEHC True PC9_epitope_Rep6 866.3089485967 866.30784993586 98.706 2 -1.2721602559363285 0.3829986727226234 1.0 ['ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 9056 6437 AVHTDKVQTLQ True PC9_epitope_Rep3 1238.66190011518 1238.66026490379 29.785 3 -1.2722067758472158 0.3829986727226234 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 30098 7295 FYKQFYIVKDW True NCI_RA007_Epitope_Rep2 1535.7812869718696 1535.7796349037899 32.996 3 -1.2722476347886202 0.3829986727226234 1.0 ['ENST00000406462.6_1_1:109428057-109428105:+|nuORF'] 15849 9339 EDFEQKYNFRF True PC9_epitope_Rep2 1521.6888431390096 1521.68719490379 41.261 3 -1.272274321620401 0.3829986727226234 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 62817 9261 LLLVVILIVKK True PC9_epitope_Rep4 1249.9101163134499 1249.90900993586 43.221 2 -1.272279045429949 0.3829986727226234 1.0 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF', 'ENST00000531050.5_1_6:128321419-128718758:-|nuORF', 'nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK', 'PTPRK|p.Y967*|1|0.09|ENSG00000152894|chr6:127991374-127991375|CT/-|frameshift_variant'] 110629 12598 TFVDVGVVAAS True PC9_epitope_Rep4 1063.5549754351498 1063.5538699358601 56.291 2 -1.2723444066457545 0.383002556921953 1.0 ['ENSG00000255582|ENST00000542433|OR10G2'] 49245 11889 KEPTGLSP True PC9_epitope_Rep5 827.4388830537499 827.43833496793 50.729 1 -1.272390683100914 0.383002556921953 1.0 ['ENSG00000142698|ENST00000488417|C1orf94', 'nc|nan|Q6P1W5-2|C1orf94'] 131750 9115 VTPNHSAF True PC9_epitope_Rep5 871.41881631551 871.41770993586 40.006 2 -1.2724457817978825 0.383002556921953 1.0 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT'] 73649 19599 MYEAEMQWK True PC9_epitope_Rep4 1214.51001647202 1214.5089099358602 83.512 2 -1.2724814941072753 0.383002556921953 1.0 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2009625-2011290:+|nuORF'] 63417 23287 LLVPAPQHL True PC9_epitope_Rep2 986.5913013742202 986.59020993586 95.058 2 -1.272493557915051 0.383002556921953 1.0 ['nc|ENSG00000182149|P53990-3|IST1'] 100829 12656 SLELELGLVPE True NCI_RA007_Epitope_Rep1 1197.64926974281 1197.64816993586 53.211 2 -1.27249699678381 0.383002556921953 1.0 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'ENST00000556539.5_1_12:56737175-56743495:-|nuORF'] 99978 12092 SIPFVEMKMR True H1975_Epitope_Rep2 1236.6358856914799 1236.63478993586 51.594 2 -1.2725032848009779 0.383002556921953 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR'] 34874 17415 GQLGSWTLI True H1975_Epitope_Rep2 973.5232813840499 973.52218993586 72.279 2 -1.2725515076017109 0.38300540593191446 1.0 ['ENST00000338660.5_1_1:1375524-1375638:+|nuORF'] 64868 7254 LQDSWLM[Oxidation]QAVL True NCI_RA007_Epitope_Rep1 1318.6591236143001 1318.6580299358602 32.207 2 -1.2725726663228698 0.38300540593191446 1.0 ['ENST00000481262.6_1_15:40705272-40727929:+|nuORF'] 30681 17452 GALCRACL True PC9_epitope_Rep1 805.3938645209699 805.39276993586 71.927 2 -1.2726174449135117 0.3830372688200845 1.0 ['ENSG00000169733|ENST00000310496|RFNG', 'ENST00000582478.5_1_17:80008786-80009642:-|nuORF'] 114945 8291 TQTMSPSG True H1975_Epitope_Rep2 807.3432684167499 807.3427149679301 36.842 1 -1.2726271956036914 0.3830447804806779 1.0 ['ENST00000526146.5_1_11:118184568-118186240:+|nuORF'] 18509 18568 EKHFFHKVN True NCI_RA007_Epitope_Rep5 1184.6090766966797 1184.60743490379 78.242 3 -1.2726834087084176 0.38306446703597735 1.0 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 46349 7192 ISREEREQNLL True NCI_RA007_Epitope_Rep2 1385.7262912768897 1385.72518993586 32.595 2 -1.272746019825807 0.3830869999269522 1.0 ['nc|ENSG00000019485|Q9NQV5-2|PRDM11', 'nc|ENSG00000019485|Q9NQV5|PRDM11', 'ENSG00000019485|ENST00000683152|PRDM11'] 55831 13300 LAPLAPRPP True PC9_epitope_Rep2 930.56508662638 930.56398993586 56.435 2 -1.2727469477075142 0.3830869999269522 1.0 ['ENST00000401827.7_1_8:66753887-66754151:-|nuORF'] 90887 23685 REVYNAKHH True NCI_RA007_Epitope_Rep3 1152.57883919756 1152.57718490379 102.69 3 -1.2727970737887435 0.3830869999269522 1.0 ['ENSG00000152611|ENST00000651391|CAPSL'] 124600 8412 VGVVMAHV True PC9_epitope_Rep1 810.4421946123799 810.44108993586 37.193 2 -1.272875782439998 0.3831020209398588 1.0 ['ENST00000416904.4_1_12:53582085-53582160:+|nuORF'] 122320 6511 VGCKIKAL True PC9_epitope_Rep5 830.5047948689399 830.50368993586 30.018 2 -1.2728870668952923 0.3831020209398588 1.0 ['ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 65147 13809 LQNRRLFQSLH True PC9_epitope_Rep6 1410.7844152896998 1410.7833099358602 64.92 2 -1.2730100581227588 0.3831582279251531 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 95553 15684 RWRYRCWERR True H1975_Epitope_Rep1 1565.7898521066497 1565.78874993586 65.616 2 -1.2730267459103513 0.3831657373816075 1.0 ['ENST00000328599.4_1_8:125463328-125463391:+|nuORF'] 126743 25316 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 109.41 3 -1.2731544707522024 0.38316858200233733 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 89679 21142 QYWTKWLLRLE True H1975_Epitope_Rep1 1534.8296341466196 1534.8285299358602 87.83 2 -1.2731721500202493 0.38316858200233733 1.0 ['ENSG00000125871|ENST00000377710|MGME1'] 74657 17038 NGLTRHRR True NCI_RA007_Epitope_Rep3 1008.5689432202 1008.56784993586 74.882 2 -1.273200501992639 0.38317609105849415 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 141484 8215 YTITFLIR True NCI_RA007_Epitope_Rep5 1025.59096702105 1025.5898699358602 38.279 2 -1.273236808785536 0.3831957733791055 1.0 ['ENSG00000132182|ENST00000254508|NUP210'] 4492 4272 AIWVTGWG True NCI_RA007_Epitope_Rep1 888.4493881677998 888.44828993586 20.73 2 -1.2732875290382002 0.3832276285196051 1.0 ['ENSG00000149418|ENST00000278742|ST14'] 79639 17223 PDNKLHQQVL True PC9_epitope_Rep4 1190.6407707477802 1190.6396699358602 74.257 2 -1.2733563810300776 0.383241841839405 1.0 ['ENSG00000171864|ENST00000305817|PRND'] 116097 5015 TSRGWLPKSP True NCI_RA007_Epitope_Rep2 1127.60874234351 1127.60764993586 24.13 2 -1.2734014536295772 0.383241841839405 1.0 ['nc|ENSG00000114805|Q4KWH8-2|PLCH1', 'ENSG00000114805|ENST00000460012|PLCH1', 'nc|ENSG00000114805|Q4KWH8|PLCH1'] 3226 14648 AGEPLFLL True H1975_Epitope_Rep1 858.4851049701799 858.4845549679301 61.556 1 -1.2734187418134988 0.383241841839405 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'ENST00000491066.1_1_X:153697015-153697611:+|nuORF'] 38191 11843 HDRYDHQQFKK True NCI_RA007_Epitope_Rep1 1500.7222089559598 1500.72110993586 50.048 2 -1.273441681795402 0.383241841839405 1.0 ['ENST00000483741.1_1_1:44684093-44685454:+|nuORF', 'ENSG00000178028|ENST00000372289|DMAP1'] 31087 9808 GAVDCFRQI True PC9_epitope_Rep2 1007.48585032951 1007.48474993586 43.064 2 -1.2734447699444904 0.383241841839405 1.0 ['nc|ENSG00000077713|Q8WUT9-2|SLC25A43', 'ENSG00000077713|ENST00000217909|SLC25A43'] 65881 14731 LSDNFKRSF True PC9_epitope_Rep4 1112.56145779792 1112.56036993586 64.596 2 -1.2734449362530331 0.383241841839405 1.0 ['ENSG00000139874|ENST00000267377|SSTR1'] 119292 10101 VALRPSAAAP True PC9_epitope_Rep1 951.5501648382299 951.54906993586 43.725 2 -1.2734810238265417 0.383241841839405 1.0 ['nc|ENSG00000087903|P48378-2|RFX2', 'ENSG00000087903|ENST00000303657|RFX2', 'ENST00000592172.5_1_19:6026246-6110452:-|nuORF', 'ENST00000586940.1_1_19:6027321-6110452:-|nuORF'] 57038 10628 LDRVYFGGF True PC9_epitope_Rep6 1072.5341804209197 1072.53308993586 51.698 2 -1.2735136892850012 0.383241841839405 1.0 ['ENSG00000157881|ENST00000378466|PANK4'] 95516 18032 RWQRRRQTVER True H1975_Epitope_Rep1 1569.8712732314896 1569.87016993586 75.137 2 -1.2735659115340086 0.383241841839405 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 50119 26248 KKKKGGGG True PC9_epitope_Rep5 758.4762716219798 758.47516993586 106.74 2 -1.2735737347408553 0.383241841839405 1.0 ['nc|ENSG00000100490|Q00532-2|CDKL1'] 4798 20555 ALEAIQIAP True PC9_epitope_Rep2 924.5280324113199 924.52692993586 84.499 2 -1.2736397073873529 0.3832550327401962 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1', 'PLEKHH1|p.A396Pfs*81|1|0.32|ENSG00000054690|chr14:67562816-67562816|G/-|frameshift_variant'] 30848 12103 GAPIGNTF True PC9_epitope_Rep5 775.38645355807 775.38534993586 51.548 2 -1.2736415244901924 0.3832550327401962 1.0 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A'] 45162 17669 IPPMLIIF True H1975_Epitope_Rep1 942.5612471159 942.56014993586 73.544 2 -1.2736591070770458 0.3832550327401962 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 52738 21466 KMLLKQMSL True PC9_epitope_Rep3 1090.62425837862 1090.62316993586 87.86 2 -1.2736653589856206 0.3832550327401962 1.0 ['ENST00000403716.5_1_2:131906479-131906620:+|nuORF'] 81322 18738 PLALIVVMY True H1975_Epitope_Rep2 1017.59327552017 1017.5921699358599 77.781 2 -1.2736843104918223 0.3832550327401962 1.0 ['ENSG00000148734|ENST00000277942|NPFFR1'] 29937 19861 FVYNSPRGY True PC9_epitope_Rep4 1101.5243440132099 1101.5232499358601 84.525 2 -1.2736944462440793 0.38325605169958743 1.0 ['ENSG00000106299|ENST00000223023|WASL'] 83153 9603 PSSAEIFR True H1975_Epitope_Rep1 905.4606811274899 905.45958993586 41.863 2 -1.2737013758713176 0.38325605169958743 1.0 ['ENST00000535730.1_1_11:73662114-73670750:+|nuORF', 'DNAJB13|p.F223Sfs*11|1|0.21|ENSG00000187726|chr11:73968405-73968405|T/-|frameshift_variant', 'ENSG00000187726|ENST00000339764|DNAJB13'] 124193 8250 VGTAIGSVK True NCI_RA007_Epitope_Rep2 830.48616759934 830.48561496793 36.727 1 -1.2737456293530027 0.38325605169958743 1.0 ['CDH10|p.E601Pfs*54|1|0.06|ENSG00000040731|chr5:24491641-24491651|AGCAGGGCTTC/-|frameshift_variant', 'CDH10|p.R700Nfs*23|1|0.04|ENSG00000040731|chr5:24487931-24487932|-/AAAACTACGAT|frameshift_variant', 'CDH10|p.Y730Tfs*19|1|0.15|ENSG00000040731|chr5:24487843-24487843|G/-|frameshift_variant', 'CDH10|p.T726Pfs*23|1|0.09|ENSG00000040731|chr5:24487855-24487855|G/-|frameshift_variant', 'ENSG00000040731|ENST00000264463|CDH10', 'CDH10|p.G328Afs*5|1|0.21|ENSG00000040731|chr5:24511346-24511346|C/-|frameshift_variant'] 61469 24517 LKAKGTGG True H1975_Epitope_Rep2 730.43373810366 730.4331849679301 100.86 1 -1.2737501312493225 0.38325605169958743 1.0 ['ENSG00000077420|ENST00000376236|APBB1IP'] 58679 10501 LERLLTWQGDP True H1975_Epitope_Rep3 1326.6932002434598 1326.6921099358601 45.456 2 -1.2737547354587901 0.38325605169958743 1.0 ['ENSG00000204839|ENST00000398882|MROH6'] 31224 9195 GCSHGPRG True H1975_Epitope_Rep3 769.32895576529 769.32840496793 40.361 1 -1.2737998809810822 0.3832635575893292 1.0 ['ENST00000564946.5_1_16:30663032-30664184:+|nuORF', 'ENST00000565410.5_1_16:30662428-30664184:+|nuORF', 'ENST00000563399.5_1_16:30662065-30664184:+|nuORF', 'ENST00000300835.8_2_16:30662428-30664408:+|nuORF', 'ENST00000568754.5_2_16:30662065-30664408:+|nuORF'] 8714 12849 AVAQFKKY True PC9_epitope_Rep6 953.5334521449299 953.53234993586 60.935 2 -1.2738534862054949 0.3832814097259407 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 83010 8455 PSGTFLVRRHR True PC9_epitope_Rep6 1324.7476358581598 1324.74652993586 42.221 2 -1.2738568134984496 0.3832814097259407 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 122856 4596 VGGWWGGW True PC9_epitope_Rep3 903.4027723285499 903.40166993586 22.776 2 -1.2738609012049602 0.3832814097259407 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 102616 7659 SLWMVHSP True PC9_epitope_Rep3 955.4585729525099 955.45746993586 34.46 2 -1.2738657303932097 0.3832814097259407 1.0 ['ENST00000338977.5_3_4:436159-436237:-|nuORF'] 112746 18047 TLHHLALI True PC9_epitope_Rep1 916.54943656224 916.54832993586 74.209 2 -1.273908323741716 0.38328891485037664 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 58883 10350 LETALSYMTK True H1975_Epitope_Rep3 1155.5845613112701 1155.5834699358602 44.865 2 -1.2739785208270775 0.3833085890914401 1.0 ['ENSG00000119636|ENST00000394009|BBOF1', 'ENST00000492026.4_1_14:74507337-74544940:+|nuORF'] 81556 24943 PLKKAAAL True H1975_Epitope_Rep2 810.5327238689398 810.53217496793 102.52 1 -1.2740858067767298 0.3833160937024643 1.0 ['GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 33204 9717 GKAGGGGT True H1975_Epitope_Rep1 603.29763855367 603.2970949679301 42.304 1 -1.274186540416786 0.3833235981308411 1.0 ['ENSG00000185668|ENST00000373012|POU3F1'] 123130 2654 VGKPDPAAP True PC9_epitope_Rep2 850.4548674710599 850.45376993586 14.862 2 -1.2742190796694477 0.3833264377327265 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2', 'nc|ENSG00000169398|Q05397-2|PTK2'] 126167 19484 VLFLVVWLG True PC9_epitope_Rep6 1044.63718893748 1044.6360899358601 87.608 2 -1.274234957672416 0.3833264377327265 1.0 ['nc|ENSG00000007952|Q9Y5S8-3|NOX1', 'ENSG00000007952|ENST00000372966|NOX1'] 56286 10481 LDAFAQEM True PC9_epitope_Rep5 923.40586867331 923.40476993586 45.302 2 -1.2742623793842727 0.38333313054375995 1.0 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10', 'ENST00000591843.1_1_19:13255226-13260604:-|nuORF', 'nc|ENSG00000104915|O60499-2|STX10'] 35206 26353 GRALWHLRLA True NCI_RA007_Epitope_Rep5 1191.69889476059 1191.6972449037899 108.96 3 -1.2743549273007437 0.38333313054375995 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 12983 10213 DLLREPEHFLY True H1975_Epitope_Rep1 1430.7194149912998 1430.7183099358601 44.225 2 -1.2743801996020685 0.38333313054375995 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 44698 8504 ILTRERDPS True NCI_RA007_Epitope_Rep1 1085.58292151849 1085.58182993586 37.078 2 -1.2744564829262681 0.38333313054375995 1.0 ['ENSG00000179299|ENST00000381782|NSUN7'] 10301 16883 CDESFCMLL True H1975_Epitope_Rep2 1059.40752554943 1059.40697496793 70.186 1 -1.274475005411003 0.38333313054375995 1.0 ['ENST00000601416.1_19:21281704-21301132:+|nuORF', 'nc|ENSG00000160352|Q96N38-2|ZNF714', 'nc|ENSG00000160352|Q96N38|ZNF714', 'ENSG00000160352|ENST00000456283|ZNF714'] 13912 8322 DQVVAVFVVTF True H1975_Epitope_Rep3 1222.65977485686 1222.6586699358602 36.993 2 -1.274493033050342 0.38333313054375995 1.0 ['ENSG00000257093|ENST00000536163|DENND11'] 57667 7858 LEEEVSILNR True NCI_RA007_Epitope_Rep2 1200.6350166609998 1200.6339099358602 35.196 2 -1.2745445623707328 0.38333313054375995 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant'] 82226 26575 PPAQFRKR True PC9_epitope_Rep1 998.5773826455799 998.57628993586 107.95 2 -1.2745971102174607 0.38333313054375995 1.0 ['nc|ENSG00000134884|Q9NWB6-3|ARGLU1', 'nc|ENSG00000134884|Q9NWB6-2|ARGLU1'] 35202 24856 GRALWHLRLA True H1975_Epitope_Rep3 1191.69889476059 1191.6972449037899 103.39 3 -1.2747856200932637 0.38333313054375995 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 29572 24613 FVIFMFFLN True H1975_Epitope_Rep1 1176.6041745570399 1176.60253490379 101.98 3 -1.2748322171190596 0.3833406336691488 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 46379 11697 ISRWFEVERRE True NCI_RA007_Epitope_Rep1 1505.77391017565 1505.77280993586 49.473 2 -1.2748407720437667 0.3833481366119554 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 22852 17388 EVCDSDVGHNL True PC9_epitope_Rep5 1186.4924518315797 1186.4913499358602 71.884 2 -1.274891335477035 0.3833509751675974 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 37383 7191 GVSPAVMIR True PC9_epitope_Rep1 928.5164221818 928.51532993586 32.473 2 -1.2749966979327898 0.3833509751675974 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD', 'MADD|p.I1180F|1|0.13|ENSG00000110514|chr11:47295517-47295517|A/T|missense_variant'] 133622 20860 VYAEKRRKVS True NCI_RA007_Epitope_Rep5 1234.7146043943799 1234.71295490379 87.234 3 -1.275040954083785 0.3833734822493126 1.0 ['ENST00000519204.5_1_5:167690101-167690218:+|nuORF'] 34455 16655 GPKKTKRE True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 73.313 2 -1.2750658785785522 0.3833734822493126 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 112021 5861 TISAAETPR True H1975_Epitope_Rep1 944.4927095317599 944.49160993586 27.614 2 -1.2750682274043341 0.3833734822493126 1.0 ['ENST00000428482.5_2_2:242206301-242208418:-|nuORF'] 116910 19352 TVFPSLRTI True PC9_epitope_Rep3 1032.59678067748 1032.59568993586 79.659 2 -1.2751381152646049 0.38337632001557254 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC', 'MUC5AC|p.Q326Pfs*7|1|0.11|ENSG00000215182|chr11:1164288-1164289|-/C|frameshift_variant', 'MUC5AC|p.A57E|1|0.2|ENSG00000215182|chr11:1161545-1161545|C/A|missense_variant'] 35366 13919 GSACGALR True NCI_RA007_Epitope_Rep1 733.35410788397 733.3535549679301 58.164 1 -1.2751919044552746 0.38337632001557254 1.0 ['CTNND2|p.R610G|1|0.7|ENSG00000169862|chr5:11199595-11199595|G/C|missense_variant'] 34245 5881 GNQLIPQPL True NCI_RA007_Epitope_Rep5 978.5498304850598 978.54872993586 29.308 2 -1.2752423113658315 0.3833791576437383 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 110551 23284 TFPTRGTW True PC9_epitope_Rep2 964.4766655447999 964.47556993586 95.045 2 -1.2752770773626931 0.3833791576437383 1.0 ['ENST00000563209.1_1_16:58545213-58545477:+|nuORF'] 22689 3962 ETQTQRRGWPL True NCI_RA007_Epitope_Rep1 1370.7054962626598 1370.70385490379 19.452 3 -1.2753501181325442 0.38338665920509984 1.0 ['ENST00000477976.5_1_1:880048-880436:-|nuORF'] 67617 7408 LSVMNIVAK True H1975_Epitope_Rep3 973.5630380210499 973.56194993586 33.472 2 -1.2755660517659158 0.3833941605839416 1.0 ['ENST00000470597.5_1_5:64558740-64769500:-|nuORF', 'nc|ENSG00000049192|Q9UKP5-3|ADAMTS6', 'nc|ENSG00000049192|Q9UKP5-2|ADAMTS6', 'ADAMTS6|p.D907Ifs*38|1|0.24|ENSG00000049192|chr5:65188207-65188207|C/-|frameshift_variant', 'ENSG00000049192|ENST00000381055|ADAMTS6'] 69052 18514 LTQLLTAAKP True PC9_epitope_Rep4 1054.63864548946 1054.63754993586 79.287 2 -1.2757226219557378 0.3834091627940926 1.0 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL', 'MLXIPL|p.E538D|1|0.2|ENSG00000009950|chr7:73596922-73596922|C/A|missense_variant', 'ENST00000467221.1_1_7:73010882-73011686:-|nuORF', 'nc|ENSG00000009950|Q9NP71-6|MLXIPL'] 68996 19955 LTPQQVREIC True PC9_epitope_Rep1 1185.6175927750498 1185.61648993586 81.579 2 -1.275764286745983 0.3834091627940926 1.0 ['nc|ENSG00000078043|O75928-2|PIAS2'] 120403 21525 VEELRRRRR True PC9_epitope_Rep1 1268.75378386776 1268.7526899358602 87.628 2 -1.275842230437226 0.38343166474058754 1.0 ['ENSG00000113119|ENST00000394671|TMCO6', 'nc|ENSG00000113119|Q96DC7-2|TMCO6', 'ENST00000514449.5_1_5:140019112-140019241:+|nuORF', 'ENST00000511410.5_1_5:140019112-140021405:+|nuORF'] 109937 6660 TEGEWLYLFGL True H1975_Epitope_Rep2 1326.6496040959798 1326.6479549037902 30.526 3 -1.275871577504875 0.38343166474058754 1.0 ['ARAP1|p.R826W|1|0.06|ENSG00000186635|chr11:72699070-72699070|G/A|missense_variant'] 3074 18553 AFVTLTGLDVV True PC9_epitope_Rep4 1133.63322575585 1133.6321299358601 79.439 2 -1.2759154690452505 0.38343166474058754 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant', 'ENST00000504526.1_1_4:184580477-184587420:+|nuORF', 'TRAPPC11|p.K361Efs*9|1|0.24|ENSG00000168538|chr4:183680232-183680233|-/G|frameshift_variant'] 90971 10519 RFCEEKASQK True PC9_epitope_Rep2 1224.5921063032 1224.59047490379 45.783 3 -1.2759774394181471 0.38346349414884556 1.0 ['ENST00000369151.7_1_10:120445350-120445566:-|nuORF'] 127444 19280 VNIETSHMI True PC9_epitope_Rep1 1042.51173072418 1042.5106299358602 78.963 2 -1.27611148275311 0.3834953227827314 1.0 ['ENSG00000154975|ENST00000451037|CA10'] 59563 21686 LFTTKEKL True PC9_epitope_Rep1 978.57498260374 978.57388993586 88.243 2 -1.276206960249662 0.38351032125436385 1.0 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15'] 33653 6533 GLGPAEAPAA True PC9_epitope_Rep2 852.4341320264799 852.43302993586 30.544 2 -1.2762377226164954 0.38351032125436385 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1'] 92200 15429 RLHRPQRRPQL True NCI_RA007_Epitope_Rep2 1455.86473129907 1455.8636299358602 64.716 2 -1.2762658019008333 0.38351315517388185 1.0 ['ENST00000478749.5_1_1:12079550-12082221:+|nuORF'] 66322 4797 LSFYFFFFFFE True NCI_RA007_Epitope_Rep2 1539.7114760765496 1539.70929987172 23.29 4 -1.2762748246550393 0.38351315517388185 1.0 ['ENST00000538582.5_1_12:21590984-21591200:+|nuORF'] 139788 16814 YPGPVLLL True H1975_Epitope_Rep1 870.5214904789 870.52038993586 70.084 2 -1.276307809985995 0.38352065391913587 1.0 ['nc|ENSG00000183260|Q9H3Z7|ABHD16B'] 108008 24091 SWRTRPWRR True PC9_epitope_Rep5 1299.7061053993498 1299.70444490379 97.65 3 -1.2763159501809263 0.3835281524819676 1.0 ['CARD14|p.L626Cfs*29|1|0.76|ENSG00000141527|chr17:80201765-80201765|C/-|frameshift_variant'] 46139 7066 ISKTKEAA True PC9_epitope_Rep5 846.4810822188999 846.47998993586 32.147 2 -1.2763691166529971 0.38354698255941233 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.P6438Hfs*73|1|0.11|ENSG00000054654|chr14:64214448-64214448|C/-|frameshift_variant', 'SYNE2|p.D4982Ifs*23|1|0.43|ENSG00000054654|chr14:64140040-64140040|G/-|frameshift_variant'] 13916 7556 DQVVVDNVFPN True NCI_RA007_Epitope_Rep2 1244.6037165327198 1244.60260993586 34.016 2 -1.2764036772016814 0.38354698255941233 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF'] 38724 17553 HGGGDGGY True PC9_epitope_Rep6 718.2670667013801 718.2665149679301 80.157 1 -1.2764081757894175 0.38354698255941233 1.0 ['ENST00000512222.2_1_4:83050145-83050523:+|nuORF'] 16406 9154 EEKEHLLQ True H1975_Epitope_Rep3 1024.5189242796 1024.5178299358602 40.2 2 -1.2764415756336365 0.38354698255941233 1.0 ['ENSG00000155827|ENST00000389120|RNF20', 'ENST00000478072.2_1_9:104323064-104323554:+|nuORF'] 122028 20351 VFVQSYYL True PC9_epitope_Rep3 1017.5171333744499 1017.51602993586 83.528 2 -1.2765122380255312 0.38354698255941233 1.0 ['SMAD4|p.L540Pfs*10|1|0.09|ENSG00000141646|chr18:51078424-51078430|TACTTCA/-|frameshift_variant', 'ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.A406V|1|0.56|ENSG00000141646|chr18:51067096-51067096|C/T|missense_variant', 'ENST00000590499.1_1_18:48593389-48603623:+|nuORF'] 95521 25651 RWRKALRGK True PC9_epitope_Rep1 1169.7257782147697 1169.7246899358602 103.7 2 -1.2765335124366963 0.38354698255941233 1.0 ['ENSG00000168159|ENST00000305943|RNF187'] 13130 5628 DLQWLKIII True NCI_RA007_Epitope_Rep5 1140.69068106232 1140.6890249037901 28.336 3 -1.2765365394041104 0.38354698255941233 1.0 ['ENST00000486916.5_1_6:160592405-160666544:-|nuORF', 'ENSG00000112499|ENST00000366953|SLC22A2'] 127432 8474 VNGKKVLH True NCI_RA007_Epitope_Rep2 893.5446855349699 893.54358993586 37.605 2 -1.2765634809564692 0.38354698255941233 1.0 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'GDI1|p.D34Y|1|0.14|ENSG00000203879|chrX:154438577-154438577|G/T|missense_variant', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 33180 10793 GIVRMTLS True PC9_epitope_Rep3 875.4898730807901 875.48876993586 46.479 2 -1.2765767260385372 0.38354698255941233 1.0 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 115951 24155 TSHGLRRHPS True PC9_epitope_Rep3 1146.6006372713 1146.59899490379 98.201 3 -1.2766352308921616 0.3835498151391321 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 83082 12163 PSLWAPAA True PC9_epitope_Rep4 811.4228390667898 811.42174993586 54.601 2 -1.2766557586349565 0.3835498151391321 1.0 ['ENST00000467370.5_1_3:125824416-125834086:-|nuORF'] 139699 6666 YNKFKNNCFC True NCI_RA007_Epitope_Rep5 1279.54779896307 1279.54615490379 32.309 3 -1.276712370745216 0.3835554798851973 1.0 ['SLC6A14|p.S345C|1|0.2|ENSG00000268104|chrX:116451545-116451545|C/G|missense_variant'] 12654 8593 DLDHTVPGL True PC9_epitope_Rep2 965.4818104948899 965.48070993586 38.414 2 -1.2767181925344684 0.3835554798851973 1.0 ['PXDNL|p.A820G|1|0.33|ENSG00000147485|chr8:51409165-51409165|G/C|missense_variant'] 57442 12831 LEAVMEGA True PC9_epitope_Rep3 818.3844049527399 818.38385496793 54.374 1 -1.2768075691186724 0.3835554798851973 1.0 ['ENST00000368194.7_1_1:156905230-156905260:-|nuORF'] 98435 7554 SFFFFFLALFY True H1975_Epitope_Rep3 1447.72164683743 1447.7200049037901 34.038 3 -1.276832811322696 0.3835554798851973 1.0 ['ENST00000415128.6_1_6:142623466-142692070:+|nuORF'] 92069 7208 RKVILFTFK True H1975_Epitope_Rep1 1150.72264989694 1150.72099490379 32.739 3 -1.2769150111852863 0.38357513772513346 1.0 ['ENST00000367651.3_1_6:139693526-139693751:-|nuORF'] 101993 12280 SLQNWLNRHSW True NCI_RA007_Epitope_Rep2 1439.7058306158299 1439.70472993586 52.368 2 -1.2769681669732855 0.3835947950869512 1.0 ['ENSG00000262919|ENST00000576892|CCNQ', 'nc|ENSG00000262919|Q8N1B3-2|CCNQ'] 107728 20904 SVSFSPLFIFQ True NCI_RA007_Epitope_Rep3 1270.65977485686 1270.6586699358602 91.013 2 -1.2770393831624973 0.38361261765206606 1.0 ['ENST00000548283.6_1_12:112373822-112373960:-|nuORF'] 122749 14974 VGGLEMLLPRL True PC9_epitope_Rep3 1196.6951148197597 1196.69400993586 62.728 2 -1.2770639929450411 0.38361261765206606 1.0 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 54278 11511 KWRWQLEEERK True H1975_Epitope_Rep1 1586.8317594049397 1586.8306699358602 49.263 2 -1.2770710998733157 0.38361261765206606 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 68472 3104 LTFICFFWK True NCI_RA007_Epitope_Rep4 1203.6150735939098 1203.61342490379 17.354 3 -1.277116603839457 0.38361261765206606 1.0 ['ENST00000407924.2_1_6:27705341-27705923:-|nuORF'] 96489 14456 SAAVLVPL True H1975_Epitope_Rep1 768.47454028648 768.47399496793 60.802 1 -1.277232218953482 0.3836164443525735 1.0 ['nc|ENSG00000167799|Q8WV74-2|NUDT8', 'ENSG00000167799|ENST00000376693|NUDT8', 'ENST00000534054.1_1_11:67397109-67397382:-|nuORF'] 8435 5062 ATNREWWWGRV True PC9_epitope_Rep1 1459.71091599627 1459.70926490379 24.327 3 -1.2772396554661098 0.3836164443525735 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4', 'nc|ENSG00000136002|Q9NR80-3|ARHGEF4', 'nc|ENSG00000136002|Q9NR80|ARHGEF4', 'ENST00000496764.6_1_2:131792732-131796962:+|nuORF', 'nc|ENSG00000136002|Q9NR80-4|ARHGEF4'] 66021 11991 LSEEINAREE True H1975_Epitope_Rep1 1188.5622456435601 1188.5611499358602 51.131 2 -1.2772546145456938 0.3836164443525735 1.0 ['BCL2L13|p.K412del|1|0.24|ENSG00000099968|chr22:17727308-17727310|AGA/-|inframe_deletion'] 122689 21541 VGGGGGHA True PC9_epitope_Rep2 610.2823228427 610.28177496793 88.324 1 -1.2773058915124231 0.3836164443525735 1.0 ['TBC1D24|p.Q514H|1|0.3|ENSG00000162065|chr16:2500820-2500820|G/C|missense_variant'] 139447 20311 YLPTAGRLTL True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 86.269 2 -1.277337439158364 0.3836164443525735 1.0 ['SYT6|p.K488Sfs*12|1|0.38|ENSG00000134207|chr1:114097781-114097781|C/-|frameshift_variant', 'ENSG00000134207|ENST00000610222|SYT6', 'nc|ENSG00000134207|Q5T7P8-2|SYT6'] 18209 12030 EIMHHQRRRRA True H1975_Epitope_Rep3 1488.79566576308 1488.7945699358602 51.434 2 -1.2773514229336955 0.3836164443525735 1.0 ['ENSG00000145536|ENST00000274181|ADAMTS16', 'nc|ENSG00000145536|Q8TE57-2|ADAMTS16'] 109067 8173 TAKRVTMGWP True H1975_Epitope_Rep2 1145.60154878809 1145.60044993586 36.389 2 -1.2773571760528573 0.3836164443525735 1.0 ['ENSG00000105428|ENST00000222033|ZNRF4'] 72076 19670 MEVEQYRRERE True H1975_Epitope_Rep1 1523.7150749701898 1523.7139699358602 81.875 2 -1.2773877330786794 0.3836192745887188 1.0 ['ENST00000481998.1_1_6:31513879-31514336:-|nuORF', 'nc|ENSG00000213760|O95670-3|ATP6V1G2', 'ENSG00000213760|ENST00000303892|ATP6V1G2', 'ENST00000475917.1_1_6:31510065-31514336:-|nuORF'] 40418 4712 HQWYWTYEYTD True PC9_epitope_Rep5 1590.6415585934199 1590.6399149037902 23.175 3 -1.2774064474973628 0.3836192745887188 1.0 ['ENSG00000198712|ENST00000361739|MT-CO2'] 85117 13268 QELLSRTSL True PC9_epitope_Rep3 1045.57677350889 1045.57566993586 56.071 2 -1.277513351576384 0.38366324595107243 1.0 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1', 'ENST00000530189.1_1_11:7618841-7631707:+|nuORF', 'ENST00000532926.5_1_11:7598800-7674592:+|nuORF', 'nc|ENSG00000166387|Q8ND30-2|PPFIBP2', 'ENSG00000166387|ENST00000299492|PPFIBP2'] 139815 13098 YPKLHRKTK True NCI_RA007_Epitope_Rep3 1169.7033114346898 1169.70220993586 58.802 2 -1.2775417193348015 0.38367073986260564 1.0 ['ENST00000296525.7_1_4:177136745-177136853:-|nuORF'] 69411 13489 LTWRTWMIPQA True H1975_Epitope_Rep3 1401.72272654993 1401.7216299358602 57.161 2 -1.277563547535834 0.38367639728142594 1.0 ['ENST00000460547.6_1_6:43483727-43483814:-|nuORF'] 69792 21082 LVGEVDILDR True H1975_Epitope_Rep1 1127.6186383208699 1127.61754993586 87.567 2 -1.2775832741651212 0.38367639728142594 1.0 ['nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'ENST00000547697.6_1_12:51844670-51855120:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-8|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-6|SLC4A8', 'SLC4A8|p.T704Hfs*13|1|0.5|ENSG00000050438|chr12:51475137-51475138|-/T|frameshift_variant', 'nc|ENSG00000050438|Q2Y0W8-7|SLC4A8'] 80037 18917 PFGPPVSP True PC9_epitope_Rep3 796.4119400299201 796.41084993586 77.986 2 -1.2775923275467318 0.38367639728142594 1.0 ['EPAS1|p.L667F|1|0.47|ENSG00000116016|chr2:46380673-46380673|G/T|missense_variant'] 79703 3526 PDSTRPWLES True H1975_Epitope_Rep2 1186.56185172074 1186.56019490379 18.426 3 -1.2775999947609533 0.38367639728142594 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B'] 125616 5037 VKKLLLFLK True PC9_epitope_Rep3 1100.7685374602 1100.7674499358602 24.464 2 -1.277609304491185 0.3836838905775076 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 36732 6604 GVKGAKIK True NCI_RA007_Epitope_Rep4 799.5279728416699 799.52686993586 32.029 2 -1.2776693738046287 0.3837156995051732 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 63449 14899 LLVTTSPSPV True PC9_epitope_Rep5 1012.580461907 1012.57936993586 62.312 2 -1.277860383316321 0.38378398093663374 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant'] 99455 16637 SIARTLRT True NCI_RA007_Epitope_Rep5 916.54541381096 916.54430993586 70.76 2 -1.2779264172723912 0.38380363026272596 1.0 ['ENSG00000181035|ENST00000318596|SLC25A42'] 26822 14345 FLARGHRVL True PC9_epitope_Rep6 1067.63523187487 1067.63412993586 67.076 2 -1.2781958724590752 0.3838803792851933 1.0 ['ENST00000485113.5_1_1:146742566-146742704:+|nuORF'] 127414 11766 VNETQLDQP True PC9_epitope_Rep3 1042.4931034545798 1042.49200993586 50.277 2 -1.2782068458869116 0.3838803792851933 1.0 ['nc|ENSG00000106336|O75426-2|FBXO24', 'nc|ENSG00000106336|O75426-4|FBXO24', 'ENSG00000106336|ENST00000241071|FBXO24', 'nc|ENSG00000106336|O75426-3|FBXO24'] 101886 13819 SLPRAALPAL True PC9_epitope_Rep4 1007.6127650947898 1007.61166993586 61.051 2 -1.278277990763528 0.3838803792851933 1.0 ['ENST00000258526.8_1_12:94542512-94542695:+|nuORF'] 69705 24701 LVEFTKKL True NCI_RA007_Epitope_Rep2 976.5957180483199 976.59462993586 103.83 2 -1.2783229135726617 0.3838803792851933 1.0 ['nc|ENSG00000012504|Q96RI1-5|NR1H4', 'nc|ENSG00000012504|Q96RI1-2|NR1H4', 'ENSG00000012504|ENST00000392986|NR1H4', 'nc|ENSG00000012504|Q96RI1-4|NR1H4', 'nc|ENSG00000012504|Q96RI1|NR1H4'] 110140 4115 TENELLQMFY True NCI_RA007_Epitope_Rep2 1286.58528958726 1286.5841899358602 20.647 2 -1.278352577082298 0.3838803792851933 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 104873 11527 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 50.99 2 -1.278359790350273 0.3838803792851933 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 43163 17493 IFEQFGRIF True PC9_epitope_Rep5 1155.6076797143498 1155.60658993586 72.289 2 -1.2783919944315503 0.3838803792851933 1.0 ['nc|ENSG00000159409|Q5SZQ8-4|CELF3', 'nc|ENSG00000159409|Q5SZQ8-3|CELF3', 'nc|ENSG00000159409|Q5SZQ8-2|CELF3', 'ENSG00000159409|ENST00000290583|CELF3'] 60161 5619 LGNRSHKA True PC9_epitope_Rep4 881.4831479075699 881.48204993586 28.411 2 -1.2784482870031493 0.3838878690995733 1.0 ['nc|ENSG00000124256|Q9H171-4|ZBP1', 'ENSG00000124256|ENST00000371173|ZBP1', 'ENST00000461547.5_1_20:56179631-56185646:-|nuORF', 'nc|ENSG00000124256|Q9H171-7|ZBP1'] 19519 15629 ELPLHGHMIVF True H1975_Epitope_Rep1 1291.6747137283503 1291.6736099358602 65.404 2 -1.2785487624371854 0.38393182757530814 1.0 ['nc|ENSG00000130751|Q99742-2|NPAS1', 'ENSG00000130751|ENST00000602212|NPAS1'] 67823 6906 LTAFSLEPAPS True H1975_Epitope_Rep3 1131.58119018299 1131.58008993586 31.524 2 -1.2786159228692466 0.38393931658218156 1.0 ['ERV3-1|p.S322F|1|0.08|ENSG00000213462|chr7:64992062-64992062|G/A|missense_variant'] 4715 8394 ALCSTPRM True NCI_RA007_Epitope_Rep1 877.41499388837 877.4144449679301 36.652 1 -1.2787547758277409 0.3839786057253996 1.0 ['ENST00000552360.3_1_19:47778534-47778834:+|nuORF'] 83783 20108 PVKKGVPM True PC9_epitope_Rep6 854.5047948689399 854.50368993586 90.02 2 -1.2787579167186014 0.3839786057253996 1.0 ['nc|ENSG00000061794|P82673-2|MRPS35', 'MRPS35|p.N275Yfs*6|1|0.04|ENSG00000061794|chr12:27755299-27755300|-/ATATC|frameshift_variant', 'ENSG00000061794|ENST00000081029|MRPS35'] 141722 9757 YTVVMDIKV True PC9_epitope_Rep2 1066.5732683515798 1066.57216993586 42.869 2 -1.278802377415762 0.38399824958062867 1.0 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR', 'LEPR|p.M640V|1|0.17|ENSG00000116678|chr1:65610219-65610219|A/G|missense_variant'] 71949 5530 MERWIKEHREY True NCI_RA007_Epitope_Rep2 1575.76163123979 1575.7605299358602 26.126 2 -1.2788523787625379 0.3840057374159748 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50'] 73268 11915 MSHWLYDVLS True H1975_Epitope_Rep3 1249.58014463717 1249.5790499358602 50.984 2 -1.2788868148549621 0.3840085572937558 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 121746 22583 VFLVICIVV True PC9_epitope_Rep2 1003.6140109647498 1003.61290993586 92.366 2 -1.2788946374040033 0.3840085572937558 1.0 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1', 'ENST00000563135.5_1_15:41146443-41149170:+|nuORF'] 108878 7498 TAAIDRAFEGV True NCI_RA007_Epitope_Rep4 1148.58258716532 1148.5814899358602 35.486 2 -1.278933976084088 0.3840281998298286 1.0 ['ENSG00000188315|ENST00000343010|C3orf62'] 5367 9388 ALSEWWDLYSR True NCI_RA007_Epitope_Rep2 1424.67246479888 1424.6713699358602 41.127 2 -1.2789808581193696 0.3840431738623104 1.0 ['ENST00000401884.5_2_2:241974133-241976762:+|nuORF'] 61136 15186 LIIRRLHKV True H1975_Epitope_Rep2 1146.77133142486 1146.76969490379 63.57 3 -1.2790134219845397 0.3840431738623104 1.0 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF', 'ENST00000585799.5_1_19:11132109-11172489:+|nuORF', 'SMARCA2|p.R943I|1|0.77|ENSG00000080503|chr9:2088558-2088558|G/T|missense_variant', 'ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 4403 21083 AIPESSPPSGI True PC9_epitope_Rep6 1053.5342399905699 1053.5331499358601 93.921 2 -1.2790356073291742 0.3840459926586771 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 136561 18405 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 77.606 2 -1.2790427446116328 0.3840459926586771 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 138831 14035 YIYKDTIQV True PC9_epitope_Rep4 1141.60192562757 1141.60082993586 61.896 2 -1.2791166925872266 0.3840544482255712 1.0 ['ENSG00000183742|ENST00000400331|MACC1', 'MACC1|p.W420Lfs*9|1|0.19|ENSG00000183742|chr7:20159102-20159103|-/A|frameshift_variant'] 113770 23559 TMLLMNLAA True PC9_epitope_Rep4 976.5085599200399 976.50746993586 98.926 2 -1.279165582332146 0.3840544482255712 1.0 ['ENSG00000127533|ENST00000248076|F2RL3'] 12912 16718 DLKHWKPV True PC9_epitope_Rep5 1021.5709002828098 1021.56980993586 69.313 2 -1.2791765419929773 0.3840544482255712 1.0 ['nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 4966 8578 ALGLGNGR True NCI_RA007_Epitope_Rep1 756.4242360491199 756.42312993586 37.37 2 -1.2791998694254816 0.3840544482255712 1.0 ['nc|ENSG00000162066|Q9Y303-3|AMDHD2', 'ENST00000561487.1_1_16:2577913-2578724:+|nuORF', 'ENSG00000162066|ENST00000293971|AMDHD2', 'nc|ENSG00000162066|Q9Y303-2|AMDHD2'] 93998 18720 RRKKYGIVL True PC9_epitope_Rep3 1131.72404687927 1131.72241490379 77.232 3 -1.2792171157144139 0.3840544482255712 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 125805 24781 VKVPQLAL True PC9_epitope_Rep4 866.5589386167799 866.55784993586 103.82 2 -1.2792351597482319 0.3840544482255712 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 86821 11665 QLPWWQWLKWR True NCI_RA007_Epitope_Rep1 1625.86193733441 1625.8608499358602 49.347 2 -1.2793157155603843 0.3840694198001993 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 81361 9536 PLDALEPQ True PC9_epitope_Rep5 881.4494477374501 881.44834993586 41.639 2 -1.279329657108951 0.3840694198001993 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 70121 9747 LVPFESPR True PC9_epitope_Rep5 943.51271670035 943.51160993586 42.463 2 -1.2794616363547 0.3841012116719128 1.0 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA'] 128204 10249 VPMTPGTF True PC9_epitope_Rep5 848.4102257777599 848.40912993586 44.409 2 -1.2794864860844417 0.38412084973992516 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 101000 7176 SLFWALAP True PC9_epitope_Rep1 903.4854393233499 903.48434993586 32.413 2 -1.2795532455526242 0.3841404873306192 1.0 ['ENST00000569796.1_1_16:2282158-2283271:+|nuORF'] 120105 20406 VDYNPRDNQLY True PC9_epitope_Rep3 1395.64189294659 1395.64078993586 83.744 2 -1.279632485604133 0.38414797170843157 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'ADGRL2|p.K951Nfs*54|1|0.08|ENSG00000117114|chr1:81970440-81970440|A/-|frameshift_variant', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2', 'ENSG00000072071|ENST00000361434|ADGRL1', 'nc|ENSG00000072071|O94910|ADGRL1', 'ADGRL1|p.G690Afs*56|1|0.33|ENSG00000072071|chr19:14159185-14159185|C/-|frameshift_variant', 'ADGRL1|p.N732Rfs*16|1|0.07|ENSG00000072071|chr19:14158522-14158523|-/GTACC|frameshift_variant'] 114376 17000 TPSLAPAPLA True PC9_epitope_Rep3 936.5280324113199 936.52692993586 70.549 2 -1.2796726533614313 0.38415086086438804 1.0 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'ENST00000492173.1_1_1:10718563-10720675:-|nuORF', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 91824 24875 RKKGDLPPLWW True H1975_Epitope_Rep2 1394.7822900313797 1394.78118993586 102.25 2 -1.2797400563668069 0.38415086086438804 1.0 ['NDUFB9|p.E160K|1|0.14|ENSG00000147684|chr8:124549830-124549830|G/A|missense_variant'] 92398 9337 RLPTPEQI True PC9_epitope_Rep4 952.5341804209199 952.53308993586 43.523 2 -1.2797607136049687 0.38415086086438804 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1', 'AKIRIN1-MEAF6|1|fusion'] 113614 7719 TLVNNTRTI True PC9_epitope_Rep6 1030.57710786206 1030.5760099358602 39.042 2 -1.2797829094512572 0.38415086086438804 1.0 ['ENST00000379883.2_1_9:32487998-32488040:-|nuORF'] 91167 1924 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 10.154 3 -1.2798156416399795 0.38415086086438804 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 11324 10107 DELHQFFY True NCI_RA007_Epitope_Rep1 1097.48181049489 1097.4807099358602 43.324 2 -1.2798395535251696 0.38415086086438804 1.0 ['OR14K1|p.C177Y|1|0.23|ENSG00000153230|chr1:247739144-247739144|G/A|missense_variant'] 21976 4575 ESEPLAGTK True NCI_RA007_Epitope_Rep4 930.4658260775799 930.46472993586 24.003 2 -1.2798669340817186 0.38415086086438804 1.0 ['ENST00000445604.6_1_9:66553265-66553673:-|nuORF', 'ENSG00000283886|ENST00000622735|unknown'] 78112 23816 NWGGWGRG True PC9_epitope_Rep3 888.3990839304399 888.39798993586 96.893 2 -1.2798992519887116 0.38415086086438804 1.0 ['ENST00000339362.9_1_15:73597096-73597282:+|nuORF'] 53768 16717 KSVLQFQNV True PC9_epitope_Rep6 1061.58694426977 1061.58584993586 76.777 2 -1.2799146624583384 0.38415086086438804 1.0 ['ENSG00000158445|ENST00000371741|KCNB1', 'KCNB2|p.P650Rfs*3|1|0.24|ENSG00000182674|chr8:72937299-72937299|C/-|frameshift_variant', 'ENSG00000182674|ENST00000523207|KCNB2'] 116336 7287 TTEVEALKS True PC9_epitope_Rep5 976.5076908895599 976.50658993586 32.994 2 -1.2799290381047246 0.38415086086438804 1.0 ['NEFH|p.L332V|1|0.25|ENSG00000100285|chr22:29483485-29483485|C/G|missense_variant'] 48329 21009 IYSFAITLWQM True PC9_epitope_Rep1 1371.6896950861499 1371.6885899358601 85.639 2 -1.2799415393026559 0.38415086086438804 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 119534 9074 VASLLVFQYAA True NCI_RA007_Epitope_Rep1 1180.64921017316 1180.64810993586 39.299 2 -1.2799763003914812 0.38415086086438804 1.0 ['ENSG00000283703|ENST00000686984|VSIG10L2', 'nc|ENSG00000283703|P0DP72|VSIG10L2'] 79711 5709 PDTLSPADQLK True NCI_RA007_Epitope_Rep2 1183.6084675599898 1183.60736993586 26.822 2 -1.279980195321267 0.38415086086438804 1.0 ['ENSG00000168924|ENST00000302787|LETM1', 'ENST00000511977.1_1_4:1824675-1834605:-|nuORF'] 42570 13994 IEFIYMFLF True PC9_epitope_Rep3 1221.6144048875701 1221.61276490379 58.899 3 -1.280005014223226 0.38415086086438804 1.0 ['ATP6V0A2|p.N629Y|1|0.38|ENSG00000185344|chr12:123748735-123748735|A/T|missense_variant'] 62394 15730 LLGRSHDTV True PC9_epitope_Rep2 996.53524305008 996.53414993586 65.776 2 -1.28002216481212 0.38415086086438804 1.0 ['ENSG00000135953|ENST00000258436|MFSD9'] 21561 18721 ERPKELVRKP True NCI_RA007_Epitope_Rep3 1250.7459045226597 1250.74426490379 81.869 3 -1.2800491399184695 0.38415834366115037 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16'] 124355 9006 VGTVADLF True NCI_RA007_Epitope_Rep3 820.43306939732 820.43196993586 42.522 2 -1.280126996017921 0.3841658262760774 1.0 ['ENSG00000138115|ENST00000371270|CYP2C8', 'nc|ENSG00000138115|P10632-2|CYP2C8', 'ENST00000526814.5_1_10:96796887-96827187:-|nuORF'] 33095 5027 GIPMEDGP True NCI_RA007_Epitope_Rep5 814.3531048244599 814.35200993586 26.039 2 -1.2801860775880183 0.38417330870917576 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 87162 11065 QPFHFLPTP True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 53.48 2 -1.2802604313792512 0.38419575491756475 1.0 ['ENST00000240123.11_2_8:22432250-22432496:+|nuORF'] 130692 5182 VSTTTVAS True PC9_epitope_Rep4 764.39159850816 764.39050993586 26.63 2 -1.2803330051410684 0.38419575491756475 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'MUC17|p.N4447Kfs*5|1|0.28|ENSG00000169876|chr7:101053409-101053410|-/A|frameshift_variant', 'ENSG00000169876|ENST00000306151|MUC17', 'MUC17|p.P463T|1|0.16|ENSG00000169876|chr7:101032803-101032803|C/A|missense_variant'] 94952 20224 RTKRERDQLYY True PC9_epitope_Rep1 1526.7953738962199 1526.79426993586 82.621 2 -1.2803433910830466 0.38419575491756475 1.0 ['ENSG00000198890|ENST00000370078|PRMT6'] 114450 5000 TPVNYTNWYRG True PC9_epitope_Rep5 1369.64149902377 1369.6398449037902 24.265 3 -1.280385668002436 0.3842032366234145 1.0 ['ENSG00000122852|ENST00000398636|SFTPA1', 'ENSG00000185303|ENST00000372325|SFTPA2', 'nc|ENSG00000122852|Q8IWL2-2|SFTPA1'] 43114 14595 IEYFRKAL True PC9_epitope_Rep3 1038.58621599378 1038.5851099358601 61.268 2 -1.2804215349029615 0.3842107181474687 1.0 ['nc|ENSG00000076344|O94810-3|RGS11', 'nc|ENSG00000076344|O94810-2|RGS11', 'ENSG00000076344|ENST00000397770|RGS11'] 98827 25084 SGPRVQRSLTA True PC9_epitope_Rep5 1170.6469187573798 1170.64528490379 101.63 3 -1.2804804455267995 0.38421353160573923 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 107730 21830 SVSFSPLFIFQ True NCI_RA007_Epitope_Rep5 1270.65977485686 1270.6586699358602 91.096 2 -1.2805105217746084 0.38421353160573923 1.0 ['ENST00000548283.6_1_12:112373822-112373960:-|nuORF'] 102760 7495 SNELFTTFR True NCI_RA007_Epitope_Rep1 1113.5454733806098 1113.54436993586 33.145 2 -1.280570093236453 0.38423316162892407 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 72477 18017 MLCLKIRKA True NCI_RA007_Epitope_Rep3 1074.6405771491 1074.63946993586 78.949 2 -1.280658522863364 0.384248123041038 1.0 ['ENST00000420115.6_2_3:133306843-133306921:+|nuORF'] 98432 5145 SFFFAYVGI True PC9_epitope_Rep4 1049.5222187548898 1049.52112993586 26.462 2 -1.2806601221512857 0.384248123041038 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 39961 7893 HPLEQILSV True H1975_Epitope_Rep3 1034.5760452328998 1034.57494993586 35.336 2 -1.2807246272252295 0.38426308372612855 1.0 ['ENST00000215912.9_3_22:31678754-31679060:-|nuORF'] 105473 17284 SRWAIRGR True NCI_RA007_Epitope_Rep3 1000.5678805910399 1000.56678993586 75.873 2 -1.2807559035848735 0.38426308372612855 1.0 ['nc|ENSG00000183250|P58512|LINC01547', 'ENST00000330551.3_1_21:46354729-46357558:-|nuORF', 'nc|ENSG00000183250|P58512-3|LINC01547'] 19576 20047 ELQGQPWPRP True H1975_Epitope_Rep3 1206.6145559999397 1206.6134499358602 83.902 2 -1.2807947734007212 0.38426589567287833 1.0 ['ENST00000325844.8_1_15:89021271-89021544:+|nuORF'] 64188 10289 LPGIHVSA True PC9_epitope_Rep2 792.4493881678 792.44828993586 44.907 2 -1.280801224175932 0.38426589567287833 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 98431 5680 SFFFAYVGI True PC9_epitope_Rep2 1049.5222187548898 1049.52112993586 27.236 2 -1.2808528104058667 0.3843032931258579 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 72466 10255 MKVRIFLKK True NCI_RA007_Epitope_Rep5 1161.74200544253 1161.7403549037901 46.076 3 -1.2808561321858338 0.3843032931258579 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 120467 15265 VEERWERRRPR True NCI_RA007_Epitope_Rep2 1567.8443897773097 1567.8432899358602 64.072 2 -1.280863077387604 0.3843032931258579 1.0 ['ENST00000373191.8_1_1:36396730-36396826:+|nuORF'] 120842 13242 VELQVKSV True PC9_epitope_Rep3 900.5280324113199 900.52692993586 55.968 2 -1.2808773828016584 0.3843032931258579 1.0 ['nc|ENSG00000100095|Q9BYH1-2|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-3|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-5|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-4|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-7|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-6|SEZ6L', 'ENSG00000100095|ENST00000248933|SEZ6L', 'SEZ6L|p.S330Y|1|0.91|ENSG00000100095|chr22:26296907-26296907|C/A|missense_variant', 'SEZ6L|p.G319V|1|0.12|ENSG00000100095|chr22:26294412-26294412|G/T|missense_variant'] 100724 14292 SLDSTISSEA True PC9_epitope_Rep3 1008.46113461996 1008.46002993586 60.061 2 -1.2808961355555457 0.3843032931258579 1.0 ['ENST00000524119.1_1_8:124031540-124034940:-|nuORF'] 66673 7533 LSKYCFFFL True H1975_Epitope_Rep3 1166.58343911246 1166.58234993586 33.958 2 -1.2809428427997895 0.3843303978135439 1.0 ['ENST00000368990.7_2_10:124190627-124190768:+|nuORF'] 13361 12071 DLWIQVIP True NCI_RA007_Epitope_Rep3 982.5487678558999 982.54766993586 54.6 2 -1.280974608949663 0.3843303978135439 1.0 ['ENST00000315274.6_1_11:102661490-102662103:-|nuORF'] 99905 11220 SIMEEVLIPDQ True NCI_RA007_Epitope_Rep1 1272.62715439924 1272.62604993586 47.641 2 -1.2809977896159463 0.3843332078176054 1.0 ['ENSG00000005812|ENST00000355619|FBXL3'] 98576 24732 SFRMNLVIPV True PC9_epitope_Rep2 1174.65325000778 1174.65160490379 100.81 3 -1.2810219692852967 0.3843332078176054 1.0 ['ENST00000320876.10_2_18:2722567-2722627:+|nuORF'] 10447 14238 CHVIAAPS True NCI_RA007_Epitope_Rep5 796.39015903952 796.38906993586 61.458 2 -1.281091884462366 0.3843528325721504 1.0 ['ENSG00000136937|ENST00000375147|NCBP1', 'ENST00000478100.3_1_9:100403935-100409818:+|nuORF'] 85617 5052 QGKEASEQRI True PC9_epitope_Rep4 1144.58364979448 1144.5820049037902 26.069 3 -1.2811128509670144 0.38436031046168423 1.0 ['ENST00000472880.1_1_20:61467799-61467997:+|nuORF', 'ENST00000467819.5_1_20:61467799-61472081:+|nuORF'] 131126 7108 VTEFYAANA True PC9_epitope_Rep5 984.4552613938798 984.45416993586 32.309 2 -1.2812534218525122 0.3843799344103 1.0 ['TINAG|p.W432Gfs*23|1|0.18|ENSG00000137251|chr6:54380566-54380566|T/-|frameshift_variant', 'TINAG|p.G439Efs*16|1|0.18|ENSG00000137251|chr6:54389807-54389807|G/-|frameshift_variant', 'ENSG00000137251|ENST00000259782|TINAG', 'TINAG|p.R255Efs*2|1|0.52|ENSG00000137251|chr6:54347380-54347380|C/-|frameshift_variant', 'nc|ENSG00000137251|Q9UJW2-2|TINAG'] 66991 16316 LSPIRNQLEIY True H1975_Epitope_Rep1 1344.74015043588 1344.73904993586 68.116 2 -1.2813161197642027 0.3844145117996429 1.0 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-3|DMD'] 117581 13540 TVSPQFLIDKN True NCI_RA007_Epitope_Rep2 1260.6714021697198 1260.6703099358601 57.31 2 -1.2813701224958691 0.3844145117996429 1.0 ['ENST00000588919.5_1_19:1105807-1106568:+|nuORF'] 26013 8948 FGGAKVAG True NCI_RA007_Epitope_Rep4 705.3809742548099 705.38042496793 41.251 1 -1.2814476202516731 0.3844145117996429 1.0 ['ENST00000378097.5_1_1:6052749-6100615:+|nuORF'] 112965 13833 TLLPVGPR True H1975_Epitope_Rep3 851.52288746123 851.5223349679301 58.516 1 -1.2814944451216508 0.38443694131364164 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 17960 6996 EIDALLKEDDP True H1975_Epitope_Rep3 1256.61361251008 1256.61250993586 31.872 2 -1.281498876416039 0.38443694131364164 1.0 ['ENSG00000116497|ENST00000373475|S100PBP', 'nc|ENSG00000116497|Q96BU1-2|S100PBP', 'ENST00000531123.5_1_1:33290993-33299636:+|nuORF', 'ENST00000356689.7_1_1:33290993-33299636:+|nuORF'] 130224 4805 VSEVTAQPPP True H1975_Epitope_Rep3 1023.5236753068698 1023.5225699358599 23.611 2 -1.2815039486527733 0.38443694131364164 1.0 ['ENSG00000165494|ENST00000690938|PCF11', 'nc|ENSG00000165494|O94913|PCF11'] 2879 19239 AEVKELKKQL True PC9_epitope_Rep3 1184.7128730588797 1184.71176993586 79.223 2 -1.281548622255309 0.38445470002428955 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 141013 11206 YSKIDHIL True PC9_epitope_Rep4 987.5389314481899 987.53782993586 50.88 2 -1.2815659348854591 0.38445470002428955 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|71|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|152|3|sense'] 67895 6935 LTAYFGLLDIC True PC9_epitope_Rep2 1227.6209468199897 1227.6193049037902 32.077 3 -1.2815917226333882 0.38445470002428955 1.0 ['ENST00000435270.2_1_1:146791151-146791412:+|nuORF'] 74650 22278 NGLMFVKL True PC9_epitope_Rep5 920.5153595526399 920.5142699358599 90.698 2 -1.281617488275409 0.38445470002428955 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 30533 19210 GAGNYKFQL True PC9_epitope_Rep5 996.5028802926399 996.50178993586 78.931 2 -1.2816497191579919 0.38445750649729177 1.0 ['HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 22005 19039 ESHLDTPYNVP True PC9_epitope_Rep2 1270.58298108814 1270.58188993586 78.599 2 -1.2816499584667584 0.38445750649729177 1.0 ['nc|ENSG00000103507|O14874-3|BCKDK', 'ENSG00000103507|ENST00000219794|BCKDK'] 123254 4412 VGLIQQWMVP True NCI_RA007_Epitope_Rep3 1169.6267009067699 1169.62504490379 24.137 3 -1.2817568345743764 0.38451355913678154 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 103016 7005 SPFPIYAWGFV True H1975_Epitope_Rep1 1282.63864548946 1282.63754993586 31.979 2 -1.2817856892022947 0.384533177887885 1.0 ['ENST00000548897.1_2_12:104322314-104323808:-|nuORF'] 121891 14686 VFPVGKIR True NCI_RA007_Epitope_Rep4 914.5701720068198 914.5690699358599 63.904 2 -1.2818787696125598 0.38453692122742894 1.0 ['ENST00000372725.5_1_10:76585359-76602521:+|nuORF'] 25831 7066 FFFFFFFCQEK True H1975_Epitope_Rep1 1535.6947804665895 1535.6936899358602 32.213 2 -1.281889277312878 0.38453692122742894 1.0 ['ENST00000481451.1_1_10:124183684-124184496:+|nuORF'] 75775 9115 NLLSSKPSL True PC9_epitope_Rep2 957.54949613189 957.54838993586 40.401 2 -1.2819006959820518 0.38453692122742894 1.0 ['ENSG00000164715|ENST00000297293|LMTK2'] 139218 22146 YLFKRFIF True PC9_epitope_Rep1 1132.64333694708 1132.64222993586 90.0 2 -1.2819098270710927 0.38453692122742894 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 136718 14830 WYDRFWLFFLP True H1975_Epitope_Rep3 1588.78670670548 1588.78560993586 62.425 2 -1.2819398455856348 0.38453692122742894 1.0 ['ENSG00000170915|ENST00000442253|PAQR8'] 58699 6129 LERQSSGL True PC9_epitope_Rep2 888.4664947839199 888.46538993586 28.97 2 -1.2819451878941914 0.38453692122742894 1.0 ['ENST00000579889.1_1_17:46128265-46128442:+|nuORF'] 133103 6991 VVQHGVGL True PC9_epitope_Rep3 807.4602872046698 807.45918993586 31.903 2 -1.2819467854806559 0.38453692122742894 1.0 ['ENST00000523869.1_2_8:19675786-19680957:+|nuORF', 'ENSG00000104613|ENST00000397977|INTS10'] 94066 23444 RRLHRLWG True PC9_epitope_Rep6 1092.64171423764 1092.64060993586 103.28 2 -1.2820415381562371 0.38456681440106855 1.0 ['ENSG00000183798|ENST00000332312|EMILIN3'] 79716 25272 PDVIAKNRIK True PC9_epitope_Rep2 1152.69789170108 1152.69737496793 102.88 1 -1.282064218068598 0.38456681440106855 1.0 ['ENSG00000136542|ENST00000259056|GALNT5'] 54605 21317 KYKWYLKKLVF True H1975_Epitope_Rep2 1514.9013425348996 1514.90024993586 88.209 2 -1.2820675797998147 0.38456681440106855 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 123041 5699 VGIVKLYKVLK True PC9_epitope_Rep1 1258.83767964918 1258.83658993586 26.742 2 -1.2820916573849892 0.38456681440106855 1.0 ['NLRP14|p.E1029V|1|0.61|ENSG00000158077|chr11:7070396-7070396|A/T|missense_variant'] 58678 12920 LERLLGEAP True PC9_epitope_Rep2 996.5603951687598 996.55928993586 54.992 2 -1.2821911515888205 0.38459857205303805 1.0 ['ENSG00000137507|ENST00000260061|LRRC32', 'LRRC32|p.Y404Ifs*27|1|0.32|ENSG00000137507|chr11:76660384-76660385|-/G|frameshift_variant', 'LRRC32|p.P265Rfs*6|1|0.3|ENSG00000137507|chr11:76660799-76660799|G/-|frameshift_variant'] 135131 3303 WEFFYGHFFR True NCI_RA007_Epitope_Rep2 1434.6509415086596 1434.6498499358602 17.513 2 -1.2822468969233238 0.38464247119249123 1.0 ['ENSG00000179387|ENST00000323570|ELMOD2'] 53874 13166 KTKGAGGG True NCI_RA007_Epitope_Rep3 674.3711378470998 674.3705849679301 59.062 1 -1.2822730319321038 0.38464994293207705 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 12175 12596 DIETKEELDSY True H1975_Epitope_Rep3 1340.59835636876 1340.5972499358602 53.653 2 -1.282303000153932 0.3846574144902197 1.0 ['nc|ENSG00000198758|Q8TE67-2|EPS8L3', 'ENSG00000198758|ENST00000361965|EPS8L3', 'nc|ENSG00000198758|Q8TE67-3|EPS8L3'] 12366 10163 DISARLWFTY True NCI_RA007_Epitope_Rep1 1270.63462273818 1270.63352993586 43.543 2 -1.2823554988801735 0.3846648858669257 1.0 ['nc|ENSG00000101844|Q8WYN0-2|ATG4A', 'ENSG00000101844|ENST00000372232|ATG4A'] 84451 20135 QAGIIPTEAV True PC9_epitope_Rep3 997.54441075145 997.5438649679301 82.704 1 -1.282413582142051 0.3846844987311956 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 101654 5617 SLLTC[Carbamidomethyl]AFYLG True NCI_RA007_Epitope_Rep2 1143.5634322233 1143.5623299358601 26.465 2 -1.2825079339690775 0.38471625264078096 1.0 ['nc|ENSG00000162688|P35573-2|AGL'] 111793 7008 TILATTAA True PC9_epitope_Rep1 760.43306939732 760.43196993586 31.762 2 -1.2825501173697966 0.38472372303097263 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 97070 14728 SDEFRRNCTQR True H1975_Epitope_Rep3 1410.6422443831 1410.64114993586 62.026 2 -1.282556017706736 0.38473866326716444 1.0 ['ENSG00000233757|ENST00000425953|ZNF892'] 101098 14539 SLGITRFL True PC9_epitope_Rep5 905.5334521449299 905.53234993586 60.922 2 -1.2825626898370657 0.38473866326716444 1.0 ['ENSG00000127364|ENST00000247881|TAS2R4'] 13913 7119 DQVVVDNVFPN True H1975_Epitope_Rep1 1244.6037165327198 1244.60260993586 32.408 2 -1.2826358268385267 0.3847582740451157 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF'] 5342 8846 ALRNRKGQVP True H1975_Epitope_Rep3 1137.6730739355698 1137.67196993586 39.032 2 -1.2827935439988138 0.38478535353535354 1.0 ['ENSG00000105270|ENST00000360535|CLIP3'] 15467 22316 EALQAAFLKMK True PC9_epitope_Rep4 1248.6900294393197 1248.6889299358602 94.078 2 -1.2828173563941794 0.38478535353535354 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2'] 64271 10129 LPHRGKDP True PC9_epitope_Rep2 918.5035489989799 918.50244993586 44.299 2 -1.2829400177953179 0.3848171035219561 1.0 ['ENSG00000222046|ENST00000409358|DCDC2B'] 139725 4662 YNRSEATTAP True PC9_epitope_Rep3 1108.51490152832 1108.51380993586 23.024 2 -1.2829886658714609 0.3848488527376472 1.0 ['ENSG00000163251|ENST00000295417|FZD5'] 102365 7667 SLSYSLAER True NCI_RA007_Epitope_Rep5 1024.5189242795998 1024.5178299358602 36.194 2 -1.283021499921317 0.38485444436351274 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'MACF1|p.S4099I|1|0.15|ENSG00000127603|chr1:39360829-39360829|G/T|missense_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 129301 10899 VQVSPAGPILE True H1975_Epitope_Rep3 1108.6128246644398 1108.61172993586 47.008 2 -1.2830225909665105 0.38485444436351274 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 109657 5823 TEAPRLSSGN True H1975_Epitope_Rep3 1030.50433684462 1030.5032299358602 27.418 2 -1.2830362209792927 0.38485444436351274 1.0 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7', 'nc|ENSG00000184313|Q68CQ1-4|MROH7', 'nc|ENSG00000184313|Q68CQ1-8|MROH7', 'MROH7|p.L163Ffs*10|1|0.13|ENSG00000184313|chr1:54653412-54653413|-/T|frameshift_variant'] 16133 16880 EEARLALR True NCI_RA007_Epitope_Rep3 956.5403284305198 956.53922993586 74.269 2 -1.2831500143667462 0.38485444436351274 1.0 ['nc|ENSG00000114654|Q9HA90|EFCC1', 'ENSG00000114654|ENST00000683648|EFCC1'] 65102 8214 LQLWRRRSETH True NCI_RA007_Epitope_Rep2 1480.801127983 1480.80002993586 36.588 2 -1.283226132125866 0.3848693794309022 1.0 ['ENST00000580504.5_1_17:12920195-12920919:-|nuORF'] 86380 10265 QKEDQSEDKKR True NCI_RA007_Epitope_Rep1 1389.6848203877296 1389.6837299358601 43.939 2 -1.2832595814189758 0.3848693794309022 1.0 ['ENST00000564176.5_1_16:31485144-31486093:+|nuORF', 'ENST00000568142.2_1_16:31484766-31486093:+|nuORF', 'nc|ENSG00000140682|O43294-2|TGFB1I1', 'ENST00000567066.6_1_16:31483405-31488894:+|nuORF', 'ENSG00000140682|ENST00000394863|TGFB1I1'] 101762 11622 SLNREYTF True NCI_RA007_Epitope_Rep3 1028.49270953176 1028.4916099358602 52.836 2 -1.2832685236571761 0.38487684669264477 1.0 ['ENST00000378797.6_2_13:46916808-46917036:-|nuORF'] 126348 23457 VLIPRIARVCK True NCI_RA007_Epitope_Rep4 1266.7958319205397 1266.79417490379 101.8 3 -1.2832705525635955 0.38488431377309473 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D', 'nc|ENSG00000187764|Q92854-2|SEMA4D'] 117491 9411 TVRFKNEL True PC9_epitope_Rep2 1005.5607295219299 1005.55962993586 41.539 2 -1.2833062820544423 0.3848871085214858 1.0 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B', 'EIF2S3|p.H65Y|1|0.17|ENSG00000130741|chrX:24057480-24057480|C/T|missense_variant'] 137259 3028 YCKIDHKADVV True NCI_RA007_Epitope_Rep4 1289.64380752289 1289.64217490379 16.95 3 -1.283333011714982 0.3848871085214858 1.0 ['CEACAM4|p.Q235K|1|0.12|ENSG00000105352|chr19:41619362-41619362|G/T|missense_variant'] 41695 11786 IAHMKNYIARF True PC9_epitope_Rep3 1362.7230609031 1362.7219699358602 50.352 2 -1.283365673690509 0.38490204170814013 1.0 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 96474 19840 SAAPAQRGLAG True PC9_epitope_Rep5 997.5304920228099 997.5299449679301 81.362 1 -1.2833845607812495 0.38490204170814013 1.0 ['ENST00000563284.3_1_16:2141543-2142958:+|nuORF'] 39276 22031 HILKIMWKWI True NCI_RA007_Epitope_Rep2 1366.79476929138 1366.79311490379 91.387 3 -1.2834131941209783 0.3849095080295692 1.0 ['ENSG00000016490|ENST00000394711|CLCA1'] 80008 21644 PFEDALRVP True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 88.728 2 -1.2835625118090943 0.38494125072829677 1.0 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 69324 22846 LTVFWMDFV True PC9_epitope_Rep5 1156.56270366788 1156.5616099358601 92.872 2 -1.2836032322537532 0.3849487163925472 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 79459 7833 PAVPSAPAAP True PC9_epitope_Rep4 876.4705175351999 876.46942993586 37.539 2 -1.2836133339588227 0.38495618187556135 1.0 ['ENSG00000266265|ENST00000583337|KLF14'] 65281 9905 LQVPLQAW True H1975_Epitope_Rep3 953.53345214493 953.53234993586 43.131 2 -1.2837061226042588 0.38498792285190625 1.0 ['nc|ENSG00000162006|Q96KJ4|MSLNL'] 124178 4907 VGSTVRNK True PC9_epitope_Rep3 859.48756458167 859.48646993586 23.972 2 -1.2837555029456151 0.3849935065723198 1.0 ['nc|ENSG00000111785|Q9NVN3-4|RIC8B', 'nc|ENSG00000111785|Q9NVN3-3|RIC8B', 'nc|ENSG00000111785|Q9NVN3|RIC8B', 'nc|ENSG00000111785|Q9NVN3-1|RIC8B', 'ENSG00000111785|ENST00000392837|RIC8B'] 119958 9596 VDNAPDQQNSH True H1975_Epitope_Rep2 1223.51669243347 1223.5155899358601 41.886 2 -1.283801040365709 0.3849935065723198 1.0 ['ENSG00000174469|ENST00000361727|CNTNAP2'] 106994 12767 SVERVLEIIK True H1975_Epitope_Rep3 1184.71287305888 1184.71176993586 54.322 2 -1.283825971955759 0.3849935065723198 1.0 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM', 'ENST00000583270.1_1_18:46623573-46623861:-|nuORF'] 30532 17607 GAGNYKFQL True PC9_epitope_Rep4 996.5028802926399 996.50178993586 75.741 2 -1.2838314688258379 0.3849935065723198 1.0 ['HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 95688 4850 RYFFDEWMFGK True H1975_Epitope_Rep3 1524.6860066880397 1524.68490993586 23.781 2 -1.2838985060234938 0.38502057213598245 1.0 ['ENSG00000135577|ENST00000258042|NMBR'] 46851 16037 ITKEKLHTI True PC9_epitope_Rep2 1081.6495445263301 1081.64844993586 66.942 2 -1.2839045086521157 0.38502057213598245 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 53517 21745 KRKSDRMEST True NCI_RA007_Epitope_Rep5 1236.62446906064 1236.6228149037902 90.753 3 -1.2839863881314055 0.3850308267391621 1.0 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1', 'YTHDC1|p.P618Lfs*28|1|0.07|ENSG00000083896|chr4:68316420-68316421|-/A|frameshift_variant', 'YTHDC1|p.I310Nfs*4|1|0.24|ENSG00000083896|chr4:68333354-68333355|-/G|frameshift_variant'] 66635 9688 LSKKPPDWK True H1975_Epitope_Rep1 1097.62332977849 1097.62222993586 42.19 2 -1.2839954077798852 0.3850308267391621 1.0 ['ENST00000531325.5_1_1:85403252-85462600:-|nuORF', 'nc|ENSG00000153898|Q8IZK6-2|MCOLN2', 'ENSG00000153898|ENST00000370608|MCOLN2'] 36322 12933 GVELADGPLS True PC9_epitope_Rep3 956.4814761417199 956.48036993586 54.77 2 -1.2840008074917602 0.3850308267391621 1.0 ['ENST00000474528.5_1_2:73169304-73169592:-|nuORF'] 60653 13457 LHLGVIGSALA True PC9_epitope_Rep5 1049.62332977849 1049.62222993586 56.779 2 -1.284102672224651 0.3850504265932012 1.0 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'nc|ENSG00000142494|Q96FL8-2|SLC47A1', 'ENST00000497548.5_1_17:19437252-19459239:+|nuORF'] 139237 18815 YLHDQNPVL True PC9_epitope_Rep4 1097.5505587610498 1097.54946993586 80.457 2 -1.2841746585239633 0.38506067961165047 1.0 ['ENST00000557624.1_1_14:24808148-24809140:-|nuORF', 'nc|ENSG00000129465|Q9Y572-3|RIPK3', 'nc|ENSG00000129465|Q9Y572-2|RIPK3', 'ENSG00000129465|ENST00000216274|RIPK3'] 12279 6647 DILLDDLDTVP True PC9_epitope_Rep4 1227.62344891779 1227.62234993586 32.737 2 -1.2841874215780997 0.38506067961165047 1.0 ['nc|ENSG00000051825|Q99550-2|MPHOSPH9', 'ENSG00000051825|ENST00000606320|MPHOSPH9'] 16901 20361 EFLLRLSK True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 84.377 2 -1.2842040944512 0.38506067961165047 1.0 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3'] 101226 12038 SLHIREFTL True PC9_epitope_Rep2 1114.6134933707801 1114.6123899358602 51.621 2 -1.2842230880147398 0.3850634693332686 1.0 ['ZNF814|p.E664Nfs*249|1|0.42|ENSG00000204514|chr19:57873400-57873400|C/-|frameshift_variant', 'ENST00000435989.6_1_19:58384023-58384878:-|nuORF'] 77906 11510 NVIGARRASWR True H1975_Epitope_Rep3 1284.7163357298798 1284.7152299358602 49.399 2 -1.2842321071671225 0.3850634693332686 1.0 ['ENSG00000108953|ENST00000264335|YWHAE', 'YWHAE-SLC43A2|1|fusion', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 34358 7175 GPEPLSHFE True PC9_epitope_Rep5 1011.46616043075 1011.46506993586 32.565 2 -1.2842754950103452 0.3850783942527062 1.0 ['ENSG00000007047|ENST00000262891|MARK4'] 29253 19830 FTYPLHTYP True PC9_epitope_Rep6 1137.54949613189 1137.54784490379 88.936 3 -1.2843112626737048 0.3850783942527062 1.0 ['TMEM59|p.L54F|1|0.29|ENSG00000116209|chr1:54053027-54053027|C/A|missense_variant'] 31406 18749 GDYATIFNNL True H1975_Epitope_Rep1 1126.5294889633 1126.52838993586 78.177 2 -1.2844612679886933 0.38514464615085914 1.0 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ABCC5|p.S796Ffs*25|1|0.06|ENSG00000114770|chr3:183959830-183959831|-/ATTTTTAGATTTGTCATCAAAG|frameshift_variant', 'ABCC5|p.L1090Vfs*62|1|0.25|ENSG00000114770|chr3:183947469-183947470|AA/-|frameshift_variant'] 824 5107 ACILLMFSSSS True PC9_epitope_Rep3 1157.54606762757 1157.54443490379 24.73 3 -1.2844804877165499 0.38514464615085914 1.0 ['ENST00000398632.3_1_21:42774955-42775423:+|nuORF'] 208 7714 AAFFQSVGNF True NCI_RA007_Epitope_Rep4 1086.5134449763398 1086.5123499358601 36.344 2 -1.284518632271263 0.38514464615085914 1.0 ['SLC9A9|p.I404Nfs*94|1|0.58|ENSG00000181804|chr3:143493757-143493758|-/T|frameshift_variant', 'SLC9A9|p.F532Pfs*21|1|0.12|ENSG00000181804|chr3:143363490-143363494|TCAAA/-|frameshift_variant', 'ENSG00000181804|ENST00000316549|SLC9A9'] 13115 9767 DLQSKAWPR True NCI_RA007_Epitope_Rep1 1099.57744221523 1099.5763499358602 41.994 2 -1.2845227625700772 0.38514464615085914 1.0 ['nc|ENSG00000250305|Q9P272-3|TRMT9B', 'ENSG00000250305|ENST00000524591|TRMT9B'] 89759 15679 RAGKRAAP True H1975_Epitope_Rep2 825.4933186684498 825.49222993586 65.47 2 -1.2846198522230925 0.3851595680135906 1.0 ['ENST00000451107.3_1_12:95475298-95611245:-|nuORF', 'ENST00000343958.8_1_12:95604994-95611239:-|nuORF'] 4595 11664 AKQWFRWLWIR True PC9_epitope_Rep2 1588.87792175172 1588.87627490379 50.196 3 -1.284629021075237 0.3851595680135906 1.0 ['ABCB1|p.L545Wfs*40|1|0.34|ENSG00000085563|chr7:87549440-87549440|G/-|frameshift_variant'] 85301 11246 QEREKELQHRY True H1975_Epitope_Rep3 1514.7589883874998 1514.75788993586 48.36 2 -1.2846693747825575 0.3851670286733567 1.0 ['ENSG00000096401|ENST00000371477|CDC5L'] 89281 7046 QVWITSEWVK True NCI_RA007_Epitope_Rep1 1274.66592286646 1274.66428490379 31.403 3 -1.2846896300533863 0.38517448915206526 1.0 ['nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 123959 9944 VGRYIKNI True H1975_Epitope_Rep1 961.5709002828099 961.56980993586 43.186 2 -1.2847697489740215 0.38518006212385947 1.0 ['nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF'] 46812 15923 ITHERYLLLPF True PC9_epitope_Rep4 1400.7816213250396 1400.7799649037902 69.175 3 -1.2848131814017836 0.38518006212385947 1.0 ['ENST00000462410.5_1_1:211526581-211529879:+|nuORF'] 98783 24984 SGHVSLCWRP True PC9_epitope_Rep1 1140.5498475683999 1140.54820490379 101.02 3 -1.2848438587583666 0.38518006212385947 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 78398 15911 NYLKLLKCR True NCI_RA007_Epitope_Rep3 1149.6692344250898 1149.6681299358602 70.245 2 -1.2848487939965243 0.38518006212385947 1.0 ['ENSG00000172179|ENST00000306482|PRL'] 67293 10504 LSRVRVLGL True PC9_epitope_Rep4 1011.6552986131098 1011.65420993586 48.126 2 -1.2849378075369462 0.3851949816787595 1.0 ['ENSG00000140678|ENST00000268296|ITGAX', 'ITGAX|p.T817Nfs*33|1|0.3|ENSG00000140678|chr16:31373329-31373330|-/A|frameshift_variant', 'ITGAX|p.S699I|1|0.26|ENSG00000140678|chr16:31371720-31371720|G/T|missense_variant', 'ENST00000571644.1_1_16:31374636-31388147:+|nuORF', 'ITGAX|p.V928Lfs*50|1|0.21|ENSG00000140678|chr16:31377257-31377257|G/-|frameshift_variant'] 3060 10302 AFTTEDYDM True PC9_epitope_Rep5 1091.4117418993899 1091.4106499358602 44.614 2 -1.2849400581389736 0.3851949816787595 1.0 ['ENSG00000170348|ENST00000303575|TMED10', 'ENST00000534816.1_1_8:146220430-146220868:+|nuORF'] 132150 25328 VTVLLALKL True H1975_Epitope_Rep3 968.66340368532 968.66285496793 105.36 1 -1.2849818005678184 0.3852024411846783 1.0 ['PCDHGA4|p.L790Sfs*10|1|0.25|ENSG00000262576|chr5:141357473-141357473|C/-|frameshift_variant', 'nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4', 'ENSG00000262576|ENST00000571252|PCDHGA4'] 122693 4611 VGGGGGSP True H1975_Epitope_Rep3 586.27108945266 586.27054496793 22.858 1 -1.2850465031618765 0.3852080123266564 1.0 ['ENST00000479976.5_1_16:838624-840569:+|nuORF'] 27314 8241 FLRRQYWHWLR True NCI_RA007_Epitope_Rep2 1659.8898834177498 1659.8882249037902 36.692 3 -1.2850609376248832 0.3852080123266564 1.0 ['ENST00000513055.1_1_5:92921088-92921313:-|nuORF'] 136800 5754 WYYYSLRFYST True H1975_Epitope_Rep3 1547.7085159544297 1547.70688490379 27.159 3 -1.2851266498315903 0.3852080123266564 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 11751 11467 DHCKYKYL True NCI_RA007_Epitope_Rep3 1068.5062514209199 1068.5051499358601 52.225 2 -1.285154821955602 0.3852080123266564 1.0 ['ENSG00000163389|ENST00000295588|POGLUT1', 'ENST00000486607.5_1_3:119198882-119211282:+|nuORF'] 134675 4044 VYSSQRERHR True PC9_epitope_Rep2 1316.6697794602799 1316.6681249037902 20.825 3 -1.2851736779715295 0.3852154712219742 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|99|3|sense', 'ENST00000435560.1_1_3:178819298-178865723:-|nuORF'] 123464 7754 VGPAKVIV True NCI_RA007_Epitope_Rep4 781.5061747679299 781.50506993586 36.504 2 -1.2852488891860454 0.38525932666060053 1.0 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'NFKB1|p.V149Sfs*3|1|0.26|ENSG00000109320|chr4:102576909-102576910|-/A|frameshift_variant'] 112227 11487 TKLPSGLP True PC9_epitope_Rep1 811.4803539429099 811.47924993586 49.065 2 -1.285268906989316 0.3852695685931965 1.0 ['CON__Q05443'] 135614 22810 WLKKILLLL True NCI_RA007_Epitope_Rep3 1138.7841875243398 1138.78308993586 99.156 2 -1.2852716763574932 0.3852695685931965 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 24661 14341 FALLFAGFGFY True H1975_Epitope_Rep2 1251.6328318330297 1251.6317299358602 60.313 2 -1.2853013300747684 0.3852695685931965 1.0 ['CSMD3|p.I3643L|1|0.22|ENSG00000164796|chr8:112228793-112228793|T/G|missense_variant'] 134678 8838 VYSVDMGWRVL True H1975_Epitope_Rep1 1323.66454296747 1323.6634499358602 38.919 2 -1.2853467064224118 0.3852770262892914 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|211|1|anti-sense'] 109942 7441 TEGIHHHY True H1975_Epitope_Rep2 992.4464280456802 992.44532993586 33.567 2 -1.285375966918345 0.38529939829192544 1.0 ['L1MA4A_dup2646|chr7:55461716-55462655:-|1.008969920648077|0.4304615177296836|1.23|541.0|9|1|sense'] 115922 6893 TSGEHFNL True PC9_epitope_Rep5 903.40864555463 903.40754993586 31.483 2 -1.285376665973851 0.38529939829192544 1.0 ['ENSG00000076650|ENST00000170564|GPATCH1', 'ENST00000592165.1_1_19:33587130-33591098:+|nuORF'] 112645 15437 TLFLCGGL True PC9_epitope_Rep1 822.4309612223399 822.42986993586 64.197 2 -1.2854017025131768 0.38529939829192544 1.0 ['ENST00000493891.5_1_1:60103921-60223658:+|nuORF', 'ENST00000466791.5_1_1:60103921-60146476:+|nuORF', 'nc|ENSG00000172456|Q96C11-6|FGGY', 'nc|ENSG00000172456|Q96C11-4|FGGY', 'nc|ENSG00000172456|Q96C11-5|FGGY', 'ENSG00000172456|ENST00000303721|FGGY', 'nc|ENSG00000172456|Q96C11-3|FGGY'] 46023 15102 ISGLIHYAP True PC9_epitope_Rep2 969.52836676449 969.52726993586 63.347 2 -1.2854804987893667 0.3853068552642752 1.0 ['ENSG00000093072|ENST00000399837|ADA2'] 65298 23561 LRAKGTMA True NCI_RA007_Epitope_Rep3 846.47455736982 846.47346993586 102.21 2 -1.2854998648200133 0.38531431205570515 1.0 ['ENSG00000130821|ENST00000253122|SLC6A8', 'nc|ENSG00000130821|P48029-3|SLC6A8', 'nc|ENSG00000130821|P48029-4|SLC6A8', 'ENST00000485324.1_1_X:152959908-152960666:+|nuORF', 'ENST00000431994.5_1_16:32890029-32891910:-|nuORF', 'nc|ENSG00000130821|P48029-2|SLC6A8'] 7391 8063 ARWVCRSFRRH True NCI_RA007_Epitope_Rep5 1472.76838838608 1472.7672899358602 37.704 2 -1.2855202259827307 0.38532176866622186 1.0 ['ENSG00000100078|ENST00000215885|PLA2G3'] 126733 26672 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 110.51 3 -1.2855550607262436 0.38536561696346255 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 116731 5003 TVDLNQVL True NCI_RA007_Epitope_Rep2 900.4916469025999 900.49054993586 24.085 2 -1.2856227236241906 0.38537307277072186 1.0 ['ENSG00000131737|ENST00000394001|KRT34', 'CON__O76011', 'ENSG00000006059|ENST00000007735|KRT33A', 'CON__Q6NTB9', 'CON__O76009', 'CON__Q8IUT8'] 137681 6572 YEKDKERE True H1975_Epitope_Rep1 1095.5196525555898 1095.5185499358602 30.338 2 -1.2856483193305317 0.3853758536614952 1.0 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3'] 112566 11477 TLEISPPLPT True PC9_epitope_Rep2 1066.5910265906998 1066.58992993586 49.464 2 -1.28565143196653 0.3853758536614952 1.0 ['ENST00000471809.5_1_22:37159849-37172159:-|nuORF', 'ENST00000476548.1_1_22:37168757-37172063:-|nuORF'] 95452 13238 RWLEKEERFLK True NCI_RA007_Epitope_Rep1 1532.8463468399198 1532.84470490379 55.491 3 -1.2857393184597332 0.3853833090732654 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 80038 21739 PFGPPVSP True PC9_epitope_Rep3 796.4119400299201 796.41084993586 88.913 2 -1.2857593977704669 0.38538887002086264 1.0 ['EPAS1|p.L667F|1|0.47|ENSG00000116016|chr2:46380673-46380673|G/T|missense_variant'] 129015 21020 VQLPAALA True PC9_epitope_Rep3 781.46978925921 781.46868993586 86.131 2 -1.2858088947537432 0.38538887002086264 1.0 ['ENST00000397887.7_1_21:46270219-46270474:-|nuORF'] 113146 8994 TLPLPEGF True NCI_RA007_Epitope_Rep3 872.4643695256 872.46326993586 42.476 2 -1.28587796172269 0.38538887002086264 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 12699 13715 DLDTKDIKLP True H1975_Epitope_Rep1 1156.63395403184 1156.6328499358601 57.893 2 -1.2859208759618872 0.38538887002086264 1.0 ['ENST00000551506.1_1_12:46623410-46662443:-|nuORF', 'ENST00000549049.5_1_12:46633613-46662443:-|nuORF'] 939 7348 ADQDINYYIP True NCI_RA007_Epitope_Rep1 1210.5506183307 1210.5495299358602 32.576 2 -1.2859503341581036 0.385396324822609 1.0 ['ENSG00000106302|ENST00000223026|HYAL4'] 29569 10485 FVIFC[Carbamidomethyl]PEPGQK True NCI_RA007_Epitope_Rep2 1320.6536442100298 1320.6525499358602 45.377 2 -1.2860354933614146 0.38540377944351456 1.0 ['ENSG00000105849|ENST00000222567|POLR1F'] 36884 20699 GVLLVMLIF True PC9_epitope_Rep6 1003.6140109647499 1003.6134749679301 92.381 1 -1.2860663719456218 0.38543549189176074 1.0 ['MS4A7|p.V186L|1|0.23|ENSG00000166927|chr11:60392694-60392694|G/T|missense_variant'] 86200 17369 QIGRLFQNP True PC9_epitope_Rep6 1071.58252759567 1071.5814299358601 79.425 2 -1.2861685375737484 0.38545507471375895 1.0 ['ENST00000495554.1_1_1:153609256-153609364:+|nuORF'] 138044 25035 YGCHCGLG True NCI_RA007_Epitope_Rep1 808.2996297829599 808.2990849679301 103.61 1 -1.286190567928927 0.3854625283508593 1.0 ['ENSG00000117215|ENST00000375105|PLA2G2D', 'nc|ENSG00000117215|Q9UNK4-2|PLA2G2D'] 96563 13174 SAETFRRAKYH True H1975_Epitope_Rep1 1364.69493157896 1364.69382993586 55.77 2 -1.286212118496102 0.38546998180715586 1.0 ['ENSG00000173214|ENST00000671876|MFSD4B'] 73647 14854 MYDIFYYVRYF True PC9_epitope_Rep5 1578.72172349042 1578.72007490379 62.137 3 -1.2862303813285474 0.38547743508265514 1.0 ['ENST00000492560.6_1_7:139529050-139575514:+|nuORF'] 86385 2676 QKELDMYVEWN True PC9_epitope_Rep5 1453.6547661294098 1453.65313490379 14.799 3 -1.2862717003598432 0.38549044338798877 1.0 ['ENSG00000182263|ENST00000333129|FIGN'] 4622 24177 ALAAALTAAA True PC9_epitope_Rep4 842.48616759934 842.48561496793 101.47 1 -1.286314932275502 0.38549044338798877 1.0 ['ENSG00000223496|ENST00000435634|EXOSC6'] 66588 8449 LSIPMTRFAP True NCI_RA007_Epitope_Rep2 1131.61105084263 1131.6099499358602 37.507 2 -1.2864105219701212 0.38549044338798877 1.0 ['ENST00000358825.9_1_11:129825441-129830819:-|nuORF', 'ENST00000527581.5_2_11:129817219-129830810:-|nuORF'] 103137 18868 SPHRVPILATA True PC9_epitope_Rep2 1160.6665915728 1160.66494490379 77.941 3 -1.2864249529109577 0.38549044338798877 1.0 ['ENST00000522421.1_1_2:220250088-220250490:-|nuORF'] 55978 20019 LASASHEMDR True PC9_epitope_Rep4 1115.5029569456299 1115.50184993586 85.138 2 -1.2864450968340047 0.38549044338798877 1.0 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.G1552Hfs*13|1|0.14|ENSG00000151320|chr14:32822467-32822468|GG/-|frameshift_variant'] 62876 25211 LLNGKKRRRWI True PC9_epitope_Rep2 1438.8997198254597 1438.89862993586 102.64 2 -1.2864840786443907 0.3854932207911907 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 41577 24273 IAAAVVVVTYP True H1975_Epitope_Rep3 1101.6433965167298 1101.6422899358602 101.11 2 -1.2864847366175534 0.3854932207911907 1.0 ['ENSG00000205639|ENST00000338315|MFSD2B'] 37171 22868 GVQPTRRRQ True PC9_epitope_Rep3 1096.62137271588 1096.62077496793 93.229 1 -1.2865835812304391 0.38550067306176405 1.0 ['ENST00000531072.1_1_11:64808545-64809015:+|nuORF'] 44699 8471 ILTRERDPS True NCI_RA007_Epitope_Rep2 1085.58292151849 1085.58182993586 37.594 2 -1.2866050877395627 0.3855155770606711 1.0 ['ENSG00000179299|ENST00000381782|NSUN7'] 58260 12191 LELPVARAP True H1975_Epitope_Rep1 964.5705659296399 964.56946993586 51.912 2 -1.2866276112928843 0.3855155770606711 1.0 ['ENST00000225964.9_1_17:48268227-48270392:-|nuORF'] 121504 10941 VEYRPLTL True NCI_RA007_Epitope_Rep2 989.5545815123298 989.55348993586 47.166 2 -1.2867031373546698 0.3855351555868157 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'ENST00000485535.5_1_3:48445895-48454598:-|nuORF', 'ENST00000470525.1_1_3:48452064-48453367:-|nuORF'] 135122 10082 WEEMRDKMRKW True H1975_Epitope_Rep1 1593.7544376843698 1593.7533499358601 43.716 2 -1.2867350195206335 0.38554260698737614 1.0 ['ENSG00000104412|ENST00000220853|EMC2', 'ENST00000517593.5_1_8:109455866-109468189:+|nuORF'] 116982 6653 TVGQRMKRG True NCI_RA007_Epitope_Rep2 1031.5658319857098 1031.5647299358602 30.489 2 -1.2868018295806254 0.38558176195961924 1.0 ['ENST00000470944.1_1_21:33038770-33039596:+|nuORF'] 56816 19658 LDNKNPKI True PC9_epitope_Rep1 940.5341804209199 940.53308993586 80.44 2 -1.2868138054535634 0.38558176195961924 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 136290 15780 WSLDHKIFYY True NCI_RA007_Epitope_Rep1 1370.66592286646 1370.66482993586 65.476 2 -1.2868232439023053 0.3856013387335387 1.0 ['ENSG00000130988|ENST00000397180|RGN'] 11346 17002 DENKKVGLALK True PC9_epitope_Rep1 1213.7030366511697 1213.70192993586 70.221 2 -1.287048571103002 0.38563304109522595 1.0 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1', 'ENSG00000013374|ENST00000568733|NUB1'] 43777 5917 IHNALKQTPK True NCI_RA007_Epitope_Rep5 1148.6665915728 1148.66494490379 29.445 3 -1.28723425726895 0.3857206950490487 1.0 ['ENSG00000150347|ENST00000279873|ARID5B', 'nc|ENSG00000150347|Q14865-2|ARID5B'] 36985 10234 GVNGGGGW True NCI_RA007_Epitope_Rep3 702.30853759054 702.3079849679301 47.333 1 -1.2872585966567578 0.3857206950490487 1.0 ['ENST00000003100.12_1_7:91761115-91763805:-|nuORF'] 58521 13720 LEQFRVAHED True PC9_epitope_Rep2 1242.59929985862 1242.59820993586 58.065 2 -1.2872815317076047 0.3857234664306241 1.0 ['ENSG00000164610|ENST00000297157|RP9'] 74284 8823 NEKNLPQHRFP True NCI_RA007_Epitope_Rep5 1378.7105816430999 1378.7094899358601 40.604 2 -1.2873184287009658 0.3857234664306241 1.0 ['ENSG00000138756|ENST00000502613|BMP2K'] 68819 10683 LTLREHLEVY True NCI_RA007_Epitope_Rep1 1271.68738658703 1271.68628993586 45.545 2 -1.2874488137432325 0.3857551653894655 1.0 ['ENSG00000154262|ENST00000284425|ABCA6'] 92690 2871 RNRLMRDMAQ True PC9_epitope_Rep1 1289.6444933125701 1289.6428349037901 15.641 3 -1.2874884850229256 0.3857626132188716 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 98093 8014 SERSEARRK True H1975_Epitope_Rep3 1117.59521753769 1117.59412993586 35.798 2 -1.287568979117148 0.38578963322218857 1.0 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 37722 21487 GWDSGGSC True PC9_epitope_Rep1 767.25445341235 767.25334993586 87.493 2 -1.287574423736647 0.38578963322218857 1.0 ['SLC22A12|p.H142Qfs*177|1|0.31|ENSG00000197891|chr11:64592800-64592801|-/A|frameshift_variant'] 2783 4300 AETTMMPEEIE True H1975_Epitope_Rep3 1279.5312054090698 1279.53010993586 21.654 2 -1.2875866482874148 0.3857970803627722 1.0 ['ENSG00000166780|ENST00000300006|BMERB1', 'nc|ENSG00000166780|Q96MC5-2|BMERB1', 'ENST00000567550.1_1_16:15528510-15675189:+|nuORF'] 128136 13440 VPLLLTLI True PC9_epitope_Rep4 880.5997407996 880.59864993586 59.596 2 -1.287764782137938 0.3858119741021848 1.0 ['ENST00000251343.9_1_14:24906506-24906650:+|nuORF'] 112370 9801 TLAPPGCH True PC9_epitope_Rep5 794.37450897538 794.37340993586 42.668 2 -1.287809856790071 0.3858119741021848 1.0 ['ENSG00000119943|ENST00000370575|PYROXD2'] 37160 20664 GVQNITAA True PC9_epitope_Rep6 772.40791727864 772.4073649679301 92.238 1 -1.2878802869514536 0.3858194207010269 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 5808 7177 APEEKASVGP True NCI_RA007_Epitope_Rep4 983.4923751785898 983.49126993586 34.229 2 -1.2879926184112156 0.38585111542192047 1.0 ['ENSG00000120742|ENST00000239944|SERP1'] 58974 16093 LEVARTSL True PC9_epitope_Rep1 887.50763131991 887.50652993586 66.718 2 -1.2880383204063062 0.385870685369964 1.0 ['nc|ENSG00000263528|Q14164-2|IKBKE', 'ENSG00000263528|ENST00000581977|IKBKE'] 116564 16088 TTWERLYFFTQ True NCI_RA007_Epitope_Rep1 1490.7194149912998 1490.7183099358601 66.684 2 -1.2881457296863439 0.3859079116456126 1.0 ['ENST00000547809.5_1_12:105570964-105626916:-|nuORF', 'ENSG00000136044|ENST00000258530|APPL2', 'nc|ENSG00000136044|Q8NEU8-3|APPL2', 'nc|ENSG00000136044|Q8NEU8-2|APPL2'] 15801 3305 EDDPEMKA True PC9_epitope_Rep1 933.37496246785 933.37386993586 17.616 2 -1.2881675511760755 0.3859079116456126 1.0 ['ENST00000572422.1_1_6:109106963-109107203:-|nuORF'] 14783 9938 DVPFSQNA True PC9_epitope_Rep1 876.39774651776 876.39664993586 43.088 2 -1.288201387217749 0.3859079116456126 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 99721 11407 SIHRRLHLTKR True PC9_epitope_Rep4 1415.8585832894698 1415.85694490379 51.647 3 -1.2882206182257447 0.3859079116456126 1.0 ['ENST00000527561.5_1_8:144766681-144776697:+|nuORF', 'ENST00000532486.5_1_8:144774355-144776697:+|nuORF', 'ENSG00000181135|ENST00000358656|ZNF707'] 44739 16623 ILWVLVKCA True NCI_RA007_Epitope_Rep4 1043.6201589743498 1043.6190699358601 72.061 2 -1.2882506429795335 0.3859079116456126 1.0 ['ENST00000404424.5_1_2:29336870-29336996:+|nuORF'] 88795 5977 QTSQVLTAV True PC9_epitope_Rep4 945.5131106231698 945.51200993586 29.937 2 -1.2882613308912543 0.3859153563591839 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 102256 13613 SLSHWRPRP True PC9_epitope_Rep2 1134.60466002258 1134.6035699358602 57.655 2 -1.2883918149380045 0.3859217416602017 1.0 ['ENSG00000152795|ENST00000295470|HNRNPDL'] 82180 8615 PNRPRRGQ True PC9_epitope_Rep4 979.54239411919 979.54128993586 40.621 2 -1.288407867139646 0.3859217416602017 1.0 ['ENST00000373034.8_1_X:99664142-99664250:-|nuORF'] 10214 3988 CCCCCCCS True PC9_epitope_Rep1 826.10688658094 826.10578993586 20.248 2 -1.2884428676315656 0.3859217416602017 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 47350 12507 IVGGLCFIPMK True NCI_RA007_Epitope_Rep2 1176.63990844276 1176.63880993586 53.261 2 -1.2884690315565446 0.3859217416602017 1.0 ['ENST00000300584.7_1_15:78322423-78337251:-|nuORF'] 86731 21085 QLKYSETP True PC9_epitope_Rep1 964.48656152216 964.48546993586 85.933 2 -1.2884797755983484 0.3859217416602017 1.0 ['ENSG00000179008|ENST00000321731|C14orf39'] 37808 18893 GYFNAYKLL True PC9_epitope_Rep4 1087.57023157647 1087.56912993586 80.759 2 -1.2885320186701923 0.3859217416602017 1.0 ['CPNE3|p.T521A|1|0.23|ENSG00000085719|chr8:86558357-86558357|A/G|missense_variant'] 83340 6295 PTEIIAFSDR True PC9_epitope_Rep4 1147.5873381925899 1147.58569490379 31.273 3 -1.288548033084619 0.3859217416602017 1.0 ['ENSG00000117450|ENST00000319248|PRDX1'] 56217 4022 LCFRPRRKR True PC9_epitope_Rep1 1230.7243983157798 1230.72330993586 20.374 2 -1.2885547154591177 0.3859217416602017 1.0 ['ENST00000424605.5_1_9:2535977-2539406:-|nuORF'] 36750 11473 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 51.064 2 -1.2885644474591305 0.3859217416602017 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 37167 20575 GVQNVLKKHQA True PC9_epitope_Rep6 1220.69895433024 1220.6978499358602 91.87 2 -1.2886401503603682 0.3859413069566166 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 82966 6493 PSEVDDVKD True H1975_Epitope_Rep2 1002.4505699362599 1002.44946993586 29.891 2 -1.288647197204029 0.3859487502727339 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF'] 123237 23111 VGLGRKRSSRS True PC9_epitope_Rep3 1201.7003513125699 1201.69924993586 94.164 2 -1.2886870762207516 0.3859561934084049 1.0 ['ENST00000353703.8_2_20:43514450-43530178:+|nuORF', 'ENST00000428262.1_3_20:43514450-43516249:+|nuORF', 'ENST00000372839.7_2_20:43514450-43530188:+|nuORF'] 56613 13289 LDIAGDED True H1975_Epitope_Rep2 846.3606923027 846.3601449679301 56.246 1 -1.2887261511374786 0.3859719293142317 1.0 ['nc|ENSG00000185437|P55822|SH3BGR', 'ENSG00000185437|ENST00000333634|SH3BGR'] 105799 8410 SSILCALIV True NCI_RA007_Epitope_Rep4 917.5255898831699 917.52448993586 39.163 2 -1.2888454609417366 0.3859719293142317 1.0 ['ENSG00000204019|ENST00000371894|CT83'] 38618 19000 HFEVLKNHT True PC9_epitope_Rep5 1123.57744221523 1123.5763499358602 78.111 2 -1.288864051478396 0.3859719293142317 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1', 'ENSG00000159714|ENST00000565726|ZDHHC1'] 81808 23003 PLPPQPQNGL True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 93.974 2 -1.2888792329411922 0.3859719293142317 1.0 ['ENSG00000275023|ENST00000621332|MLLT6'] 79777 7914 PEDIIIQTF True PC9_epitope_Rep5 1074.55972646242 1074.5586299358602 35.382 2 -1.2888858954998363 0.3859719293142317 1.0 ['ENSG00000169271|ENST00000302005|HSPB3'] 121009 15580 VEPYSSILT True NCI_RA007_Epitope_Rep3 1007.5175272972699 1007.5169749679301 68.859 1 -1.288886571436346 0.3859719293142317 1.0 ['ENST00000559655.1_1_15:35141948-35142251:-|nuORF'] 112728 15308 TLGTLQPPD True PC9_epitope_Rep5 940.48656152216 940.48601496793 63.892 1 -1.2889233905486999 0.3859719293142317 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 120960 5019 VEPHSPSPSSK True H1975_Epitope_Rep3 1150.56185172074 1150.56074993586 24.427 2 -1.289021303056014 0.38601849495206586 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 81462 19215 PLFTLNLNTPE True H1975_Epitope_Rep3 1257.6605031328502 1257.6594099358601 80.565 2 -1.2890296844891473 0.38601849495206586 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 47436 7096 IVLSVSRP True NCI_RA007_Epitope_Rep3 869.53345214493 869.53234993586 35.027 2 -1.289037477357073 0.38601849495206586 1.0 ['nc|ENSG00000293505|Q96P88|GNRHR2'] 37548 8022 GVVIVAPK True NCI_RA007_Epitope_Rep5 781.5061747679299 781.50506993586 37.547 2 -1.2890572853758373 0.38602125777169105 1.0 ['ENST00000481145.1_1_1:89725323-89725548:-|nuORF'] 112822 11957 TLILLWRPP True H1975_Epitope_Rep1 1107.68045073179 1107.67934993586 50.997 2 -1.2890578223199178 0.38602125777169105 1.0 ['ENST00000472424.1_1_1:82447641-82450328:+|nuORF'] 121782 6901 VFPAAPGP True NCI_RA007_Epitope_Rep5 754.4013753462199 754.40026993586 33.227 2 -1.289245531782762 0.3860408183052162 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 121896 9581 VFQPVLWPEY True H1975_Epitope_Rep3 1276.6492101731599 1276.64810993586 41.864 2 -1.2892602546348033 0.38605569963884917 1.0 ['nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS'] 82554 24951 PPTLIEERRD True PC9_epitope_Rep5 1224.64625005104 1224.64459490379 101.15 3 -1.289270681427208 0.38605569963884917 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 19225 22228 ELIQRPQL True PC9_epitope_Rep5 995.5763795860698 995.57528993586 90.505 2 -1.2893633451884157 0.3860994970611404 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 11196 8054 DDYRFVYAGP True PC9_epitope_Rep1 1201.54038800017 1201.53928993586 35.801 2 -1.2893902053432642 0.38610693683649233 1.0 ['ENST00000485807.1_1_1:227921606-227921849:-|nuORF', 'ENST00000480590.1_1_1:227921003-227922761:-|nuORF', 'nc|ENSG00000081692|Q9H9V9-2|JMJD4', 'ENSG00000081692|ENST00000620518|JMJD4', 'nc|ENSG00000081692|Q9H9V9-1|JMJD4'] 29742 22013 FVNDPENEI True PC9_epitope_Rep4 1075.48220441771 1075.48110993586 92.893 2 -1.2894315328723747 0.3861218158462396 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2'] 76313 8292 NPRRWWRWCWQ True H1975_Epitope_Rep3 1672.7946031339197 1672.7935099358601 36.879 2 -1.2894443180367048 0.3861218158462396 1.0 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 60064 17232 LGLGLWALLWP True NCI_RA007_Epitope_Rep4 1237.72231554377 1237.72120993586 74.608 2 -1.2894713136025864 0.3861245758603975 1.0 ['ENSG00000156232|ENST00000286760|WHAMM'] 88473 19101 QSSVVRCRPLT True NCI_RA007_Epitope_Rep4 1244.6659399497998 1244.66484993586 82.62 2 -1.2895579495899598 0.3861245758603975 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 2883 11763 AEVPALQLL True NCI_RA007_Epitope_Rep2 952.5593325395998 952.55822993586 50.354 2 -1.2895923631477988 0.3861320148810606 1.0 ['ENST00000496575.1_1_22:31289665-31289989:+|nuORF'] 33507 19787 GLDNILGFV True PC9_epitope_Rep4 946.5123823471799 946.51128993586 84.237 2 -1.2896160913968673 0.3861394537214319 1.0 ['ENST00000374928.7_1_X:56313944-56314022:+|nuORF'] 105582 19311 SSDMSAHVTSP True PC9_epitope_Rep1 1117.47098811101 1117.46988993586 79.085 2 -1.289680085606977 0.38617112804914994 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 20147 2285 ENDSGTVRRTR True PC9_epitope_Rep2 1289.6436242820898 1289.64196490379 12.882 3 -1.2896895438331872 0.38617196587824737 1.0 ['ENST00000607222.1_1_1:1550975-1551155:-|nuORF'] 41771 10625 IAPYFVYL True PC9_epitope_Rep5 984.5320551625998 984.53094993586 45.856 2 -1.2897432022557365 0.38617196587824737 1.0 ['ENSG00000197208|ENST00000200652|SLC22A4'] 23183 20039 EVLKSITV True PC9_epitope_Rep1 887.53278343859 887.53168993586 81.908 2 -1.289743341627243 0.38617196587824737 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 109345 8304 TCENFIRLCKK True H1975_Epitope_Rep1 1353.68971216949 1353.68860993586 36.873 2 -1.2897911672446971 0.38617196587824737 1.0 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 16106 20706 EEAFVKESKE True PC9_epitope_Rep6 1194.5768330785397 1194.57517490379 92.408 3 -1.2898086619383713 0.38617196587824737 1.0 ['nc|ENSG00000175416|P09497-2|CLTB', 'ENSG00000175416|ENST00000310418|CLTB'] 110856 26031 TGRGGPPP True H1975_Epitope_Rep1 737.3820368839699 737.3814849679301 108.05 1 -1.2898816987366808 0.3861794036035818 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 58532 15005 LEQHQEPVL True PC9_epitope_Rep6 1091.56112344475 1091.56002993586 69.74 2 -1.2899731847438531 0.3861989579546831 1.0 ['ENST00000389131.7_1_8:23155097-23155310:-|nuORF'] 129163 18581 VQRVEVGPAP True PC9_epitope_Rep2 1050.5821932424997 1050.58108993586 76.824 2 -1.2901589017618462 0.3862185118319177 1.0 ['ENST00000343738.10_1_16:15227887-15231353:-|nuORF'] 12769 8375 DLEMVRYLLEW True H1975_Epitope_Rep1 1465.72753714685 1465.72642993586 37.143 2 -1.2901825825291149 0.38622402617071544 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 38507 4766 HERKEETF True PC9_epitope_Rep4 1074.5094222250598 1074.50832993586 24.902 2 -1.29029661964047 0.38622402617071544 1.0 ['ENSG00000131153|ENST00000253462|GINS2'] 19345 11147 ELLGPVPPEQ True NCI_RA007_Epitope_Rep2 1077.57062549929 1077.5695299358601 47.941 2 -1.2903244390043447 0.38622402617071544 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 12880 12385 DLIGCQRL True PC9_epitope_Rep2 916.4800366730799 916.47892993586 52.948 2 -1.2903297476015183 0.38622402617071544 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'ENST00000463634.6_1_6:4056876-4060847:+|nuORF'] 141472 7068 YTHVNEVWP True NCI_RA007_Epitope_Rep4 1143.53490869691 1143.53326490379 33.812 3 -1.2903883520593575 0.38623146263448677 1.0 ['ENSG00000188716|ENST00000338487|DUSP29'] 67846 11940 LTANFIAPKRP True NCI_RA007_Epitope_Rep1 1226.7135417652198 1226.7124499358601 50.429 2 -1.2904469628824506 0.3862347981975871 1.0 ['ENST00000338008.9_1_5:79732623-79732692:+|nuORF'] 64685 11625 LPVPQRAL True PC9_epitope_Rep1 892.54943656224 892.54832993586 49.593 2 -1.2904701398856055 0.3862347981975871 1.0 ['ENST00000562281.1_1_15:89422400-89424620:-|nuORF'] 63201 11215 LLRYLLDRDDP True H1975_Epitope_Rep3 1387.7459640923098 1387.7448699358602 48.238 2 -1.2904854387738127 0.3862347981975871 1.0 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3'] 56010 16199 LASLLDIL True PC9_epitope_Rep4 856.52696978216 856.52586993586 70.253 2 -1.2905078694162877 0.3862347981975871 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 100801 12625 SLEHLEQLAQY True H1975_Epitope_Rep2 1329.65648038157 1329.65538993586 53.66 2 -1.2906801540064472 0.3862347981975871 1.0 ['ENSG00000186150|ENST00000334179|UBL4B'] 133337 18539 VVVDPGVI True PC9_epitope_Rep5 796.4694549060399 796.46834993586 76.333 2 -1.2906963277155308 0.3862347981975871 1.0 ['ENSG00000066084|ENST00000301180|DIP2B'] 79568 8075 PDFTQESRGY True H1975_Epitope_Rep2 1198.5254662120199 1198.52436993586 36.008 2 -1.2907761131163178 0.3862347981975871 1.0 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2', 'TET2|p.Q654Kfs*46|1|0.07|ENSG00000168769|chr4:105235901-105235901|C/-|frameshift_variant'] 7754 8692 ASQQQVEVYKI True H1975_Epitope_Rep1 1291.67721582615 1291.67610993586 38.364 2 -1.290800270778555 0.3862347981975871 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 139329 20612 YLLDPKITRF True PC9_epitope_Rep6 1264.71795843932 1264.7163149037901 92.014 3 -1.2908300749413664 0.3862347981975871 1.0 ['ENSG00000182950|ENST00000332145|ODF3L1'] 91165 1535 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 8.1326 3 -1.2908443575051654 0.3862347981975871 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 89831 25077 RAPITYKT True NCI_RA007_Epitope_Rep5 948.53926580136 948.5387149679301 103.96 1 -1.2908595542041792 0.3862347981975871 1.0 ['ENST00000404404.5_1_7:5037114-5037204:+|nuORF'] 99654 6452 SIGAPSPGP True PC9_epitope_Rep5 781.39701824177 781.39646496793 29.792 1 -1.290883191172726 0.3862347981975871 1.0 ['nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L', 'nc|ENSG00000144893|Q86YW9-2|MED12L', 'nc|ENSG00000144893|Q86YW9-3|MED12L'] 5032 15924 ALIQNYIR True PC9_epitope_Rep3 989.56581490237 989.56470993586 66.399 2 -1.2908854280740807 0.3862347981975871 1.0 ['nc|ENSG00000116852|O75037-3|KIF21B', 'ENSG00000116852|ENST00000461742|KIF21B', 'nc|ENSG00000116852|O75037-2|KIF21B', 'nc|ENSG00000116852|O75037|KIF21B'] 66954 14936 LSPDLSHTTL True PC9_epitope_Rep1 1082.56078909158 1082.5596899358602 62.274 2 -1.29090655214894 0.3862347981975871 1.0 ['ENSG00000198734|ENST00000367797|F5'] 62981 10792 LLPLRPPGV True NCI_RA007_Epitope_Rep3 960.6120368187999 960.61092993586 49.493 2 -1.2909106785762405 0.3862347981975871 1.0 ['ENST00000339195.10_2_21:47706310-47706622:+|nuORF'] 126876 19577 VLQIMEKMP True PC9_epitope_Rep1 1087.57697383303 1087.57586993586 80.129 2 -1.2909186173527547 0.3862347981975871 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 70354 11106 LVSQDTQEM True H1975_Epitope_Rep2 1049.46992548185 1049.4688299358602 47.754 2 -1.2909499027429825 0.3862347981975871 1.0 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3', 'ENST00000491292.5_1_2:128018779-128018920:-|nuORF'] 3579 6245 AGMGPPSP True H1975_Epitope_Rep1 712.32141077336 712.3208649679301 29.089 1 -1.2909587630443722 0.3862347981975871 1.0 ['ENST00000469423.1_1_19:12757375-12758379:-|nuORF'] 62116 10625 LLEEIWKVNFT True H1975_Epitope_Rep1 1390.7496524904195 1390.7485499358602 45.825 2 -1.2909692885749744 0.3862347981975871 1.0 ['ENSG00000179002|ENST00000375371|TAS1R2'] 90170 6443 REDLCCYWEKL True H1975_Epitope_Rep1 1456.6479069271597 1456.6468099358601 29.845 2 -1.2909703226294171 0.3862347981975871 1.0 ['FAM71B|p.F165C|1|0.4|ENSG00000170613|chr5:157165675-157165675|A/C|missense_variant'] 29712 15983 FVLYLYKHRRR True NCI_RA007_Epitope_Rep1 1549.8993854722899 1549.89828993586 66.272 2 -1.2911042077512989 0.38624774409224694 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 15356 7596 EAGLAPGELQ True H1975_Epitope_Rep2 983.49237517859 983.49182496793 34.171 1 -1.2911362006857312 0.38624774409224694 1.0 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF', 'ENST00000452600.1_1_2:130988892-130989183:+|nuORF'] 80577 8850 PGPSLAGK True PC9_epitope_Rep3 725.40718900265 725.4066449679301 38.993 1 -1.2911811988111048 0.38624774409224694 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 133709 8699 VYDFWRMVWQE True NCI_RA007_Epitope_Rep1 1557.70747040861 1557.70636993586 37.838 2 -1.2912034544736275 0.38624774409224694 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU'] 46854 11756 ITKGYVIRLY True H1975_Epitope_Rep1 1224.72304381976 1224.72194993586 50.211 2 -1.2912108775980924 0.38624774409224694 1.0 ['nc|ENSG00000175606|Q9BUB7-2|TMEM70', 'ENSG00000175606|ENST00000312184|TMEM70'] 89741 9711 RADWRRRQLRK True PC9_epitope_Rep1 1539.8970940565098 1539.89489987172 42.211 4 -1.291380622141915 0.3862915142559531 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 71947 5526 MERWIKEHREY True NCI_RA007_Epitope_Rep1 1575.76163123979 1575.7605299358602 25.564 2 -1.2914705122965566 0.38630445577530975 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50'] 36757 23298 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 94.896 2 -1.2915723297104027 0.38630445577530975 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'CFAP43|p.L1055Wfs*44|1|0.12|ENSG00000197748|chr10:104164177-104164177|G/-|frameshift_variant'] 46382 16678 ISRWFEVERRE True PC9_epitope_Rep2 1505.77391017565 1505.77280993586 69.396 2 -1.291624531494952 0.38630445577530975 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 43004 23433 IETDKQIIRHE True PC9_epitope_Rep5 1380.7361276846002 1380.7350299358602 95.116 2 -1.2916291919480252 0.38630445577530975 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 36986 10572 GVNGGGGW True NCI_RA007_Epitope_Rep5 702.30853759054 702.3079849679301 47.3 1 -1.2916377909872554 0.38630445577530975 1.0 ['ENST00000003100.12_1_7:91761115-91763805:-|nuORF'] 80148 6529 PFRPWWERYQP True H1975_Epitope_Rep1 1560.76261721596 1560.76096490379 30.171 3 -1.2916993464474633 0.38631188838290864 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'AMY2B|p.A275Qfs*18|1|0.25|ENSG00000240038|chr1:103574338-103574338|G/-|frameshift_variant', 'AMY1A|p.W331*|1|0.06|ENSG00000237763|chr1:103660473-103660474|GG/-|frameshift_variant', 'nc|ENSG00000240038|P19961-2|AMY2B', 'ENSG00000243480|ENST00000414303|AMY2A', 'nc|ENSG00000243480|P04746-2|AMY2A'] 67905 8412 LTCLTEQN True PC9_epitope_Rep2 920.42733239388 920.42622993586 37.727 2 -1.2917764399482405 0.38632207433602594 1.0 ['ENSG00000035720|ENST00000265404|STAP1'] 122855 4177 VGGWWGGW True PC9_epitope_Rep3 903.4027723285499 903.40166993586 21.184 2 -1.2918390317118642 0.38632207433602594 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 12896 13957 DLITRQKQLF True PC9_epitope_Rep5 1260.7190210684796 1260.7179299358602 58.707 2 -1.291852789750833 0.38632207433602594 1.0 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'MORF4L1|p.M293Cfs*11|1|0.28|ENSG00000185787|chr15:78894185-78894185|C/-|frameshift_variant', 'MORF4L1|p.A353Vfs*4|1|0.36|ENSG00000185787|chr15:78897035-78897036|-/T|frameshift_variant', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 122045 10688 VFWDMRLWH True H1975_Epitope_Rep1 1288.6175332054 1288.6164299358602 46.07 2 -1.2919037964559275 0.38632950637019814 1.0 ['ENSG00000181585|ENST00000643606|TMIE'] 18797 6721 ELDFYVKGMPI True H1975_Epitope_Rep1 1310.6580606046998 1310.6569699358602 30.896 2 -1.2920335802652694 0.3863498752694422 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 126601 12121 VLMAQKEGKR True NCI_RA007_Epitope_Rep3 1158.65431263694 1158.65320993586 54.791 2 -1.2920440971160636 0.3863498752694422 1.0 ['ENSG00000170949|ENST00000683776|ZNF160'] 43339 15156 IFYYEDDSE True H1975_Epitope_Rep2 1179.4608002667899 1179.4591649037902 63.453 3 -1.2920468820731763 0.3863498752694422 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 101999 7242 SLQPQHQSV True PC9_epitope_Rep1 1022.5145076055 1022.5134099358601 32.67 2 -1.2920853850275098 0.3863498752694422 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'nc|ENSG00000168916|Q9ULD9-2|ZNF608'] 27287 15034 FLQRKYMLTWF True PC9_epitope_Rep4 1531.8009768706295 1531.7998699358602 65.761 2 -1.2921090152581165 0.3863498752694422 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'ENST00000527855.1_1_3:113697695-113720591:-|nuORF'] 97498 4473 SEEMERLPG True H1975_Epitope_Rep2 1046.4702598350198 1046.46916993586 22.318 2 -1.2921176964618206 0.3863498752694422 1.0 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 56247 25080 LCRLPHLPVIF True PC9_epitope_Rep2 1306.7583837826598 1306.7572899358602 102.14 2 -1.2922466145835831 0.3863768466941148 1.0 ['ENST00000563915.5_1_16:29831829-29841846:+|nuORF', 'ENST00000566066.5_1_16:29837369-29841846:+|nuORF', 'ENST00000566554.1_1_16:29841580-29841846:+|nuORF', 'ENST00000562285.1_1_16:29831098-29841846:+|nuORF'] 141920 11008 YVEVYYPSV True PC9_epitope_Rep3 1117.53317736141 1117.53208993586 47.333 2 -1.2922709983932212 0.3863768466941148 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 136307 23504 WSRARKWTRS True PC9_epitope_Rep2 1332.7163357298798 1332.7152299358602 95.883 2 -1.2923648738325135 0.3864038168123804 1.0 ['ENST00000392795.7_1_17:62006109-62006328:-|nuORF'] 74417 8298 NESNRPDLL True PC9_epitope_Rep5 1056.5199869087598 1056.5188899358602 36.857 2 -1.292425624187834 0.3864038168123804 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2', 'SLC9C2|p.S555Vfs*10|1|0.12|ENSG00000162753|chr1:173535942-173535943|-/AC|frameshift_variant'] 83853 19274 PVMGALSS True PC9_epitope_Rep6 760.37892564948 760.37782993586 86.785 2 -1.2924423115503905 0.38641124686678857 1.0 ['ENST00000583776.1_1_18:2909718-2909787:+|nuORF'] 73269 13361 MSKEQLFIFR True NCI_RA007_Epitope_Rep1 1297.68527841205 1297.68477496793 55.975 1 -1.2924589529336543 0.3864186767412574 1.0 ['ENST00000563980.5_1_16:90088575-90097598:+|nuORF'] 14072 18982 DRRKLKQRRG True NCI_RA007_Epitope_Rep3 1311.7959830329098 1311.79488993586 82.949 2 -1.2925304429087647 0.3864382151722468 1.0 ['ENST00000344293.5_1_10:8056784-8056973:+|nuORF'] 26758 7716 FKDYVQANP True NCI_RA007_Epitope_Rep2 1080.5240096600398 1080.52290993586 34.64 2 -1.2926829405319353 0.38647536021310086 1.0 ['FAIM2|p.V130F|1|0.29|ENSG00000135472|chr12:49897077-49897077|C/A|missense_variant'] 95478 7752 RWLWWQPWWWK True NCI_RA007_Epitope_Rep2 1756.8779217517197 1756.87682993586 34.781 2 -1.2926903849177562 0.38647536021310086 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 330 22967 AAIEKLREDL True H1975_Epitope_Rep3 1156.6451874218799 1156.6440899358602 95.947 2 -1.2927301060878325 0.38647536021310086 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.E2033Sfs*5|1|0.12|ENSG00000160299|chr21:46412938-46412938|G/-|frameshift_variant', 'ENST00000466474.5_1_21:47766077-47773062:+|nuORF'] 128085 6743 VPLDSEKSDDH True NCI_RA007_Epitope_Rep3 1240.55716026312 1240.55606993586 33.614 2 -1.2927415023920368 0.38647536021310086 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32', 'ENST00000524655.5_1_11:128842326-128843235:-|nuORF'] 140020 7540 YQEEEWPQ True PC9_epitope_Rep1 1107.4509042894297 1107.44980993586 33.82 2 -1.2927575925941088 0.38647536021310086 1.0 ['ENSG00000134575|ENST00000672073|ACP2', 'ENST00000534448.5_1_11:47269480-47270343:-|nuORF', 'ENST00000529788.2_1_11:47269122-47270343:-|nuORF', 'nc|ENSG00000134575|P11117-2|ACP2', 'ENST00000444355.5_1_11:47267202-47270343:-|nuORF'] 100143 5837 SITFLYEIY True H1975_Epitope_Rep2 1147.58012755383 1147.5784949037902 27.443 3 -1.2928524441575613 0.38652654010073617 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7'] 29949 9575 FWDQWYLWYLR True NCI_RA007_Epitope_Rep1 1674.7983340183398 1674.79722993586 41.243 2 -1.2928674233019635 0.38652654010073617 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 58045 19586 LEIGYRYI True PC9_epitope_Rep2 1025.55458151233 1025.5534899358602 80.72 2 -1.292947548070052 0.3865339677696657 1.0 ['PDE3A|p.D748Y|1|0.08|ENSG00000172572|chr12:20639948-20639948|G/T|missense_variant'] 127141 24627 VLTTRKRKEL True H1975_Epitope_Rep1 1242.77720465094 1242.77554490379 102.04 3 -1.2930026026666213 0.38654882256795203 1.0 ['LIG1|p.V646L|1|0.14|ENSG00000105486|chr19:48127345-48127345|C/A|missense_variant'] 36669 22690 GVIIYIMKHSL True PC9_epitope_Rep4 1272.72641494804 1272.72587496793 95.505 1 -1.293022974001839 0.38654882256795203 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 7490 9778 ASDFQFCWNQ True H1975_Epitope_Rep1 1244.49205790876 1244.4909699358602 42.54 2 -1.293117750559202 0.38658046394498524 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'ENST00000481242.5_1_9:130127572-130155530:+|nuORF', 'ENST00000496711.5_1_9:130126995-130155530:+|nuORF'] 60164 11065 LGNSIMVLLIY True H1975_Epitope_Rep3 1234.6995314938601 1234.69842993586 47.654 2 -1.2932082093237336 0.3866363185103575 1.0 ['OR2M7|p.M40L|1|0.1|ENSG00000177186|chr1:248324451-248324451|T/A|missense_variant'] 84796 21054 QDYIRTFCS True H1975_Epitope_Rep2 1131.50189431647 1131.50023490379 87.15 3 -1.2933948475241708 0.38664729737909326 1.0 ['ENSG00000068784|ENST00000263736|SRBD1', 'ASXL2-SRBD1|1|fusion', 'nc|ENSG00000068784|Q8N5C6-2|SRBD1'] 137682 7209 YEKDKERE True NCI_RA007_Epitope_Rep2 1095.5196525555898 1095.5185499358602 32.661 2 -1.2934105255838024 0.38664729737909326 1.0 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3'] 28440 21504 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 89.787 2 -1.2934771982585895 0.38664729737909326 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 73606 6759 MVYMFKYDSTH True NCI_RA007_Epitope_Rep2 1420.61554416972 1420.6144499358602 30.906 2 -1.2934799347645745 0.38664729737909326 1.0 ['ENSG00000105679|ENST00000222286|GAPDHS'] 79979 13686 PEVMLDFIDWL True NCI_RA007_Epitope_Rep2 1376.6686252883999 1376.66752993586 57.878 2 -1.2935150707731644 0.38664729737909326 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 127742 5033 VPASQGPTNP True PC9_epitope_Rep1 966.4770594676199 966.47596993586 24.218 2 -1.2935584095797625 0.38664729737909326 1.0 ['ENSG00000205143|ENST00000378909|ARID3C'] 94923 17152 RTFLRPIT True NCI_RA007_Epitope_Rep5 1002.5974493838198 1002.59634993586 72.745 2 -1.2935941662720785 0.38664729737909326 1.0 ['ENST00000416928.6_1_2:177041212-177041380:-|nuORF'] 18217 21486 EINDIRIIGAI True PC9_epitope_Rep5 1225.7030366511701 1225.70192993586 87.68 2 -1.2936090170478545 0.38664729737909326 1.0 ['SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant'] 23357 19210 EVRLRFLSYED True H1975_Epitope_Rep1 1425.7252286477299 1425.7241299358602 80.048 2 -1.293686356026674 0.3866844207723036 1.0 ['ENSG00000159915|ENST00000683810|ZNF233'] 8706 9708 AVAQFKKY True H1975_Epitope_Rep1 953.5334521449299 953.53234993586 42.269 2 -1.293697481136967 0.3866844207723036 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 18226 12813 EINLMICHLSW True H1975_Epitope_Rep3 1357.65226403161 1357.65116993586 54.504 2 -1.293725030412845 0.3866844207723036 1.0 ['ENST00000470085.5_1_3:111846911-111847028:-|nuORF'] 83367 5689 PTGHNMKI True PC9_epitope_Rep6 896.45382192524 896.45272993586 30.004 2 -1.2937537466183786 0.3866844207723036 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 22035 6728 ESLEGRMASH True H1975_Epitope_Rep1 1115.5029569456299 1115.50184993586 30.924 2 -1.2937625639133594 0.3866844207723036 1.0 ['nc|ENSG00000168077|Q6AZY7-2|SCARA3', 'ENSG00000168077|ENST00000301904|SCARA3'] 83093 15656 PSNVSQDRKV True PC9_epitope_Rep1 1128.58873517492 1128.5876299358601 65.041 2 -1.2938581961106528 0.3866871640923837 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 14264 4749 DSQPNSTR True PC9_epitope_Rep5 903.40462280335 903.40352993586 23.316 2 -1.2938648001006887 0.3866871640923837 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|143|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|103|2|sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|21|1|sense'] 127705 7669 VPALTLAP True NCI_RA007_Epitope_Rep4 780.47454028648 780.47344993586 36.157 2 -1.2938894917113524 0.3866899072796378 1.0 ['nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 133456 16906 VVYHRGRY True PC9_epitope_Rep4 1048.5566472009998 1048.5555499358602 73.012 2 -1.2938987213686004 0.3866899072796378 1.0 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 121214 14357 VESSQGGG True NCI_RA007_Epitope_Rep3 719.3085971601898 719.3080449679301 63.785 1 -1.2939216600412664 0.3866907127900362 1.0 ['nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant', 'RYR1|p.D544Efs*26|1|0.08|ENSG00000196218|chr19:38455505-38455506|-/G|frameshift_variant'] 124900 22409 VHPLVYCP True PC9_epitope_Rep4 926.46840936022 926.46730993586 94.428 2 -1.2939259082473185 0.3866907127900362 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000525068.1_1_20:57288807-57289834:+|nuORF', 'ENST00000529976.5_1_20:57288690-57289536:+|nuORF'] 98784 24592 SGHVSLCWRP True PC9_epitope_Rep5 1140.5498475683999 1140.54820490379 99.707 3 -1.293960668232965 0.3866907127900362 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 59055 8550 LEVTRTDHQR True NCI_RA007_Epitope_Rep2 1253.64764703337 1253.64654993586 37.9 2 -1.2939839048368547 0.3866907127900362 1.0 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1'] 57192 12034 LDVLGRVW True H1975_Epitope_Rep1 956.5443511817999 956.54324993586 51.298 2 -1.2939861503797747 0.3866907127900362 1.0 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 44439 7311 ILHSVYECIAK True NCI_RA007_Epitope_Rep2 1274.66929399474 1274.66818993586 33.06 2 -1.294009152282656 0.3866934556589729 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF'] 112669 16630 TLFSGRFSRL True PC9_epitope_Rep1 1182.65094150866 1182.6493049037902 68.796 3 -1.2940253889121913 0.3866934556589729 1.0 ['BRWD3|p.M1736L|1|0.09|ENSG00000165288|chrX:80676812-80676812|T/G|missense_variant'] 48745 20946 KDFRIIQLD True PC9_epitope_Rep3 1146.6397081186199 1146.6386099358601 85.847 2 -1.2941904572934675 0.3867734985839123 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'ENST00000528389.1_1_8:11152715-11157663:+|nuORF'] 63946 21692 LNSMKKDL True PC9_epitope_Rep2 947.51100244819 947.50990993586 88.916 2 -1.2942504415516527 0.386778979982088 1.0 ['ENSG00000128849|ENST00000281282|CGNL1', 'nc|ENSG00000128849|Q0VF96-2|CGNL1'] 83781 22021 PVKKGVPM True PC9_epitope_Rep1 854.5047948689399 854.50368993586 89.524 2 -1.2943612386884598 0.386778979982088 1.0 ['nc|ENSG00000061794|P82673-2|MRPS35', 'MRPS35|p.N275Yfs*6|1|0.04|ENSG00000061794|chr12:27755299-27755300|-/ATATC|frameshift_variant', 'ENSG00000061794|ENST00000081029|MRPS35'] 11120 4669 DDDMDENSM True H1975_Epitope_Rep1 1070.3168555383802 1070.3157499358601 22.993 2 -1.2944033862050301 0.386778979982088 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3'] 65630 7353 LSAFPKNR True NCI_RA007_Epitope_Rep1 931.5239500903899 931.52284993586 32.595 2 -1.2944062957881557 0.386778979982088 1.0 ['ENSG00000171989|ENST00000307144|LDHAL6B'] 2787 5388 AETWDFFF True PC9_epitope_Rep3 1061.4494477374499 1061.44834993586 25.799 2 -1.2945640065968975 0.38683560848097587 1.0 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000432916.5_1_22:45122508-45132738:+|nuORF', 'nc|ENSG00000186654|P85299-2|PRR5', 'nc|ENSG00000186654|P85299-4|PRR5', 'ENST00000455389.3_1_22:45126703-45133124:+|nuORF', 'ENST00000495017.5_1_22:45127230-45133124:+|nuORF'] 87905 16913 QRIRVHANL True H1975_Epitope_Rep2 1105.64685918773 1105.64576993586 70.302 2 -1.2946711696740447 0.38683560848097587 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'ENST00000512413.1_1_5:115357396-115361812:+|nuORF'] 4039 10243 AHGRKVLG True PC9_epitope_Rep5 836.4980696957199 836.49696993586 44.386 2 -1.2947403598512572 0.38683560848097587 1.0 ['HBD|p.K66R|1|0.41|ENSG00000223609|chr11:5234109-5234109|T/C|missense_variant'] 116332 21881 TTESFEKSV True PC9_epitope_Rep5 1026.48695544498 1026.4858499358602 89.203 2 -1.2947522236236437 0.38683560848097587 1.0 ['ENST00000490981.1_1_3:12545028-12546775:+|nuORF', 'nc|ENSG00000154743|Q8NCE0-5|TSEN2', 'nc|ENSG00000154743|Q8NCE0-3|TSEN2', 'nc|ENSG00000154743|Q8NCE0-2|TSEN2', 'ENSG00000154743|ENST00000284995|TSEN2'] 33444 16029 GLALSSNK True NCI_RA007_Epitope_Rep2 788.4392174069201 788.4386649679301 67.067 1 -1.294780567189501 0.38683560848097587 1.0 ['nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 22212 12636 ESYERWRRIY True H1975_Epitope_Rep1 1456.7211463268 1456.72004993586 53.657 2 -1.2947819834495597 0.38683560848097587 1.0 ['MRPS21|p.C60W|1|0.13|ENSG00000266472|chr1:150308144-150308144|C/G|missense_variant'] 87098 15776 QNREEFRRLLY True PC9_epitope_Rep1 1522.8004592766597 1522.79936993586 65.501 2 -1.294787933247052 0.38684302881415417 1.0 ['nc|ENSG00000121690|Q96QD5-2|DEPDC7', 'ENSG00000121690|ENST00000241051|DEPDC7'] 110660 8170 TFYLDKYKEV True PC9_epitope_Rep4 1304.6652541601202 1304.66359490379 38.881 3 -1.294861319084256 0.3868746520802575 1.0 ['CON__ENSEMBL:ENSBTAP00000013050'] 46558 15011 ITAEVFKKHGV True PC9_epitope_Rep1 1227.6975573479099 1227.69646993586 62.559 2 -1.29489021166761 0.3868820717613602 1.0 ['ENSG00000146701|ENST00000315758|MDH2'] 16251 8760 EEEVFLKFV True NCI_RA007_Epitope_Rep2 1138.5910265906998 1138.58992993586 38.72 2 -1.2949681606227896 0.38691369378963164 1.0 ['nc|ENSG00000243414|Q86XR7-2|TICAM2', 'ENSG00000243414|ENST00000427199|TICAM2'] 111700 13346 TIFPIRAP True PC9_epitope_Rep1 913.5385375253699 913.53744993586 56.195 2 -1.2951785209980484 0.38698161840337864 1.0 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'nc|ENSG00000131652|Q86W42-2|THOC6'] 19371 17156 ELLQYEHFRKE True H1975_Epitope_Rep1 1490.7517777487399 1490.75068993586 71.441 2 -1.295268720777395 0.3869917715392062 1.0 ['ENSG00000108590|ENST00000225728|MED31'] 118554 13836 TYQRHYRNVFH True H1975_Epitope_Rep1 1519.74327875371 1519.74218993586 58.366 2 -1.2952807800484591 0.3869917715392062 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 69218 7905 LTSNRPEPIP True NCI_RA007_Epitope_Rep3 1122.6033226099 1122.6022299358601 38.206 2 -1.2953073572951908 0.3869917715392062 1.0 ['ENST00000452157.5_1_5:56218957-56234137:-|nuORF', 'nc|ENSG00000155545|Q7Z3K6-4|MIER3', 'nc|ENSG00000155545|Q7Z3K6-3|MIER3', 'ENSG00000155545|ENST00000381199|MIER3', 'nc|ENSG00000155545|Q7Z3K6-2|MIER3'] 104882 15340 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 65.708 2 -1.295528143002257 0.38703080757968106 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 91748 23606 RKFGRFLKMI True PC9_epitope_Rep5 1294.7696171726998 1294.76797490379 95.779 3 -1.2955336657225263 0.38703080757968106 1.0 ['ENST00000395603.7_1_X:76907692-76907743:-|nuORF'] 53772 12439 KSVPPKPA True PC9_epitope_Rep3 822.49633836022 822.49524993586 52.872 2 -1.2955442779861002 0.3870382246530257 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 24516 20871 FAFKISPK True PC9_epitope_Rep2 936.5432885526399 936.54218993586 85.723 2 -1.2955683974308223 0.3870409583156876 1.0 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 42571 13940 IEFIYMFLF True PC9_epitope_Rep5 1221.6144048875701 1221.61276490379 58.641 3 -1.2955686396770172 0.3870409583156876 1.0 ['ATP6V0A2|p.N629Y|1|0.38|ENSG00000185344|chr12:123748735-123748735|A/T|missense_variant'] 52809 23617 KPAATRKRRW True PC9_epitope_Rep3 1268.75780661904 1268.75670993586 96.129 2 -1.2957611386811665 0.3871209737918351 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 26656 4131 FIQQNLSG True NCI_RA007_Epitope_Rep2 905.4606811274899 905.45958993586 20.707 2 -1.2958282217805244 0.38719630239086245 1.0 ['ENST00000557380.5_1_14:50318303-50318570:-|nuORF'] 64963 6748 LQEVM[Oxidation]FTALI True H1975_Epitope_Rep1 1179.62094720043 1179.6198499358602 30.997 2 -1.295886998553927 0.38719630239086245 1.0 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 36756 23207 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 94.54 2 -1.295897291118088 0.387211131276467 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'CFAP43|p.L1055Wfs*44|1|0.12|ENSG00000197748|chr10:104164177-104164177|G/-|frameshift_variant'] 102409 13363 SLTLKSKD True PC9_epitope_Rep4 890.50729696674 890.50618993586 59.304 2 -1.295898952051567 0.387211131276467 1.0 ['ENST00000264246.7_1_3:119276596-119278392:-|nuORF'] 47078 10247 ITSVIPTLAK True NCI_RA007_Epitope_Rep4 1041.64339651673 1041.6422899358602 46.269 2 -1.2960308820092479 0.3872669417187935 1.0 ['chr6:60400318-60425367|396|13.91|0.48|4.85|+|2|PRIM2BP,PRIM2BP|1'] 46614 12717 ITDGLHALQ True PC9_epitope_Rep5 966.51344497634 966.51234993586 53.922 2 -1.2961273651162661 0.38729855296907517 1.0 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 80267 7063 PGDPVFPF True PC9_epitope_Rep6 874.4225047136199 874.42140993586 36.192 2 -1.296169246037043 0.3873180646800479 1.0 ['ENST00000396359.1_1_8:82193222-82195661:+|nuORF'] 80652 13290 PGSTSRAR True NCI_RA007_Epitope_Rep2 830.43586336198 830.43531496793 56.331 1 -1.296222987008045 0.387335615858306 1.0 ['ENST00000532788.1_1_11:615122-615224:-|nuORF'] 75617 6738 NLDSIHRLIEE True H1975_Epitope_Rep1 1337.69392851945 1337.6922749037901 30.958 3 -1.296253339638081 0.387335615858306 1.0 ['ENST00000577772.5_1_18:66504000-66564823:+|nuORF', 'nc|ENSG00000150636|Q68D86-2|CCDC102B', 'ENSG00000150636|ENST00000360242|CCDC102B'] 26964 22160 FLDVWWEV True H1975_Epitope_Rep2 1092.52803241132 1092.5269299358602 91.587 2 -1.2962665057479128 0.387335615858306 1.0 ['ENSG00000179409|ENST00000319004|GEMIN4'] 136594 22220 WWNAYILFYER True H1975_Epitope_Rep3 1559.7561348531897 1559.75393987172 92.924 4 -1.2962833626133539 0.387335615858306 1.0 ['USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 38793 22663 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 93.614 2 -1.296339993880375 0.3873410677344818 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 3819 10151 AGVGPEPERL True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 44.032 2 -1.2963505041451457 0.3873410677344818 1.0 ['ENST00000360612.4_1_22:50357538-50357607:+|nuORF'] 36569 4346 GVHCHGQG True H1975_Epitope_Rep1 793.32895576529 793.32784993586 21.706 2 -1.2964190856852433 0.3873410677344818 1.0 ['nc|ENSG00000171121|Q9NPA1-5|KCNMB3', 'nc|ENSG00000171121|Q9NPA1-4|KCNMB3', 'ENSG00000171121|ENST00000392685|KCNMB3', 'nc|ENSG00000171121|Q9NPA1-2|KCNMB3', 'nc|ENSG00000171121|Q9NPA1|KCNMB3'] 61711 26487 LKYLNKIKPP True PC9_epitope_Rep1 1212.7594293284799 1212.75778490379 107.5 3 -1.2964210611513567 0.3873410677344818 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 76024 17228 NLYSAKQI True PC9_epitope_Rep4 935.5076313199099 935.50652993586 74.275 2 -1.296488380431006 0.38736057680675523 1.0 ['nc|ENSG00000140527|Q6P2C0-2|WDR93', 'ENSG00000140527|ENST00000268130|WDR93'] 63900 7641 LNPQVLQQ True PC9_epitope_Rep5 938.51853035678 938.51742993586 34.338 2 -1.2965674372958924 0.38739022088887815 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 127936 16292 VPGWKLCP True NCI_RA007_Epitope_Rep5 898.4734947406598 898.47238993586 69.423 2 -1.2965791137681923 0.38739022088887815 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 99926 6919 SINERMAHQQR True NCI_RA007_Epitope_Rep1 1368.66806520812 1368.6669699358602 30.917 2 -1.296625210543752 0.38739022088887815 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 46844 19852 ITINSHTTAGE True PC9_epitope_Rep2 1142.5567663403 1142.5556699358601 81.752 2 -1.2966362078237414 0.38739022088887815 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 54337 17616 KYEDLYAFSYN True H1975_Epitope_Rep3 1411.6295969273897 1411.6284899358602 73.597 2 -1.2967009426154124 0.38739294527507623 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 116651 7029 TVASPRMDP True H1975_Epitope_Rep3 972.4698659122 972.46876993586 31.999 2 -1.296714198312068 0.38739294527507623 1.0 ['ENST00000492406.5_1_3:112280909-112281080:+|nuORF'] 60343 13475 LGSNNLTKVP True PC9_epitope_Rep5 1041.58185888933 1041.5807699358602 56.849 2 -1.2967409956331448 0.3874003556351232 1.0 ['ENSG00000186105|ENST00000334994|LRRC70'] 120133 6255 VEAGHNSGGPR True NCI_RA007_Epitope_Rep2 1079.5108192073899 1079.5097299358602 28.935 2 -1.29687630781189 0.3874198621023346 1.0 ['ENST00000513421.5_1_4:54457561-54482691:-|nuORF', 'ENST00000263925.7_1_4:54457561-54457720:-|nuORF', 'ENST00000512247.5_1_4:54457561-54457916:-|nuORF'] 56149 11931 LAVMNTSLFYF True NCI_RA007_Epitope_Rep1 1304.6474959209997 1304.64638993586 50.393 2 -1.2969982733237568 0.38744950044754095 1.0 ['ENST00000293894.3_1_16:1035736-1036009:+|nuORF'] 121750 18528 VFLVSVPAAP True PC9_epitope_Rep3 998.5800679841798 998.57896993586 76.486 2 -1.2970518869216174 0.38744950044754095 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 117638 9758 TVTKEEFQ True PC9_epitope_Rep1 980.4814761417199 980.48036993586 42.393 2 -1.297054565838521 0.38744950044754095 1.0 ['ENST00000416648.1_1_3:183605526-183606234:+|nuORF'] 109244 15533 TASDALDKI True PC9_epitope_Rep1 932.48147614172 932.48036993586 64.572 2 -1.2970968458180978 0.38744950044754095 1.0 ['HSP90AB1|p.N46T|1|0.07|ENSG00000096384|chr6:44248766-44248766|A/C|missense_variant'] 73395 7205 MTISCSVSP True PC9_epitope_Rep1 923.40923980159 923.40814993586 32.529 2 -1.2971667455292224 0.3874764139532633 1.0 ['nc|ENSG00000152128|Q8TC26-2|TMEM163'] 45477 21280 IQLRGGTR True PC9_epitope_Rep6 899.5300980999899 899.52900993586 94.706 2 -1.297208239462831 0.3874764139532633 1.0 ['nc|ENSG00000162946|Q9NRI5-10|DISC1', 'nc|ENSG00000162946|Q9NRI5-4|DISC1', 'ENST00000468399.2_1_1:231765255-231837778:+|nuORF', 'DISC1|p.G406Vfs*28|1|0.08|ENSG00000162946|chr1:231750023-231750023|G/-|frameshift_variant', 'nc|ENSG00000162946|Q9NRI5-7|DISC1', 'nc|ENSG00000162946|Q9NRI5-6|DISC1', 'nc|ENSG00000162946|Q9NRI5-9|DISC1', 'nc|ENSG00000162946|Q9NRI5-3|DISC1', 'nc|ENSG00000162946|Q9NRI5-8|DISC1', 'nc|ENSG00000162946|Q9NRI5-5|DISC1', 'ENST00000422590.6_1_1:231829618-232144897:+|nuORF', 'nc|ENSG00000162946|Q9NRI5-2|DISC1', 'ENSG00000162946|ENST00000439617|DISC1'] 53209 12607 KQEVKEAPP True PC9_epitope_Rep1 1024.5553097883196 1024.5542099358602 53.361 2 -1.2973350639996033 0.3874838225866928 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 81302 22333 PLAFWRKQL True PC9_epitope_Rep4 1157.6709486772497 1157.6698499358602 94.141 2 -1.297378541321767 0.38749123104090566 1.0 ['ENSG00000137875|ENST00000260442|BCL2L10'] 3211 15720 AGELRRARA True NCI_RA007_Epitope_Rep4 998.5733598942998 998.57226993586 68.269 2 -1.2974281293241685 0.3875060474117078 1.0 ['ENST00000274605.5_1_5:177540505-177546575:+|nuORF'] 126252 21037 VLHAFPPC True PC9_epitope_Rep6 882.4421946123799 882.44108993586 93.739 2 -1.2974331681617637 0.3875060474117078 1.0 ['RBM15|p.E927A|1|0.22|ENSG00000162775|chr1:110342185-110342185|A/C|missense_variant', 'nc|ENSG00000162775|Q96T37-4|RBM15', 'nc|ENSG00000162775|Q96T37-2|RBM15', 'nc|ENSG00000162775|Q96T37-3|RBM15', 'ENSG00000162775|ENST00000369784|RBM15'] 83168 7588 PSSPPTKRV True PC9_epitope_Rep4 967.5450794577899 967.5439899358599 36.567 2 -1.2975053661303895 0.38751345532831 1.0 ['ENSG00000156140|ENST00000286657|ADAMTS3'] 137947 5913 YFFLFVLFL True NCI_RA007_Epitope_Rep4 1207.6681547125897 1207.6665149037901 29.366 3 -1.2975255289331242 0.3875208630657217 1.0 ['ENST00000290075.10_1_8:23423911-23424199:+|nuORF'] 56270 8636 LCYVLTLTDV True NCI_RA007_Epitope_Rep4 1138.59439771898 1138.5927449037902 40.002 3 -1.297567844730508 0.3875282706239493 1.0 ['ENSG00000170482|ENST00000348729|SLC23A1', 'nc|ENSG00000170482|Q9UHI7-2|SLC23A1'] 96592 7267 SAGGAWGP True H1975_Epitope_Rep3 701.3132886178099 701.31274496793 32.925 1 -1.297604465566238 0.3875356780029994 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF'] 125615 5095 VKKLLLFLK True PC9_epitope_Rep1 1100.7685374602 1100.7674499358602 24.452 2 -1.2976664950320624 0.38756727338695046 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 76112 1178 NMQKARELWD True PC9_epitope_Rep3 1289.61865540421 1289.61700490379 6.482 3 -1.297778099325544 0.3876043052364252 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 5300 6673 ALQIYFWG True NCI_RA007_Epitope_Rep1 996.5069030439199 996.50580993586 29.968 2 -1.2977949426032085 0.3876043052364252 1.0 ['nc|ENSG00000134769|Q9Y4J8-15|DTNA'] 129546 15079 VRLIHLRLK True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 63.153 3 -1.297845144435125 0.3876043052364252 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 62888 16499 LLNIVPWL True PC9_epitope_Rep2 966.59023874506 966.58914993586 68.704 2 -1.2978498173387372 0.3876043052364252 1.0 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2', 'ENST00000417788.5_1_22:22024636-22041216:+|nuORF'] 39443 15025 HKYRRYQWFCL True NCI_RA007_Epitope_Rep2 1598.79287179842 1598.7917699358602 63.128 2 -1.2978609210650962 0.3876043052364252 1.0 ['ENST00000470889.5_1_3:138341046-138341142:+|nuORF'] 23320 12377 EVQRLWQRPW True NCI_RA007_Epitope_Rep2 1396.7364024681196 1396.7353099358602 52.748 2 -1.2979260082958244 0.38762652219655835 1.0 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 38169 23058 HDKRKKSRS True PC9_epitope_Rep2 1140.64758746372 1140.64594490379 94.184 3 -1.2979382007112 0.38762652219655835 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 56906 19445 LDQARKELV True PC9_epitope_Rep5 1070.60840799034 1070.60730993586 79.846 2 -1.2979655272627084 0.38762652219655835 1.0 ['nc|ENSG00000160323|Q76LX8-3|ADAMTS13', 'ENSG00000160323|ENST00000355699|ADAMTS13', 'nc|ENSG00000160323|Q76LX8|ADAMTS13', 'ADAMTS13|p.N1235Tfs*26|1|0.31|ENSG00000160323|chr9:133456202-133456202|C/-|frameshift_variant'] 100949 19864 SLFKHRGF True PC9_epitope_Rep3 990.5399345077 990.53882993586 81.643 2 -1.2979949423164314 0.3876292399782333 1.0 ['ENST00000549928.5_1_12:60154925-60173457:+|nuORF', 'SLC16A7|p.A296Lfs*5|1|0.11|ENSG00000118596|chr12:59775181-59775181|G/-|frameshift_variant', 'ENSG00000118596|ENST00000547379|SLC16A7'] 83763 5572 PVHYQHGTGLS True PC9_epitope_Rep1 1194.5781704912201 1194.57652490379 26.261 3 -1.2980137846014805 0.3876292399782333 1.0 ['DRD3|p.Q144L|1|0.32|ENSG00000151577|chr3:114147510-114147510|T/A|missense_variant'] 127252 18377 VLYLQHVL True PC9_epitope_Rep5 983.5804023373499 983.57930993586 75.705 2 -1.29810613235824 0.38765145469056084 1.0 ['ENST00000398238.8_1_17:44833191-44833326:+|nuORF'] 112562 22104 TLEHWMEHV True PC9_epitope_Rep2 1180.53352879792 1180.5324299358601 90.496 2 -1.2981637423980952 0.38765145469056084 1.0 ['PAPPA2|p.P1706H|1|0.07|ENSG00000116183|chr1:176793656-176793656|C/A|missense_variant'] 882 5385 ADIIQEVEE True NCI_RA007_Epitope_Rep2 1044.49752012868 1044.49642993586 25.565 2 -1.2981815872513531 0.38765145469056084 1.0 ['nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2', 'DUOX2|p.N1439I|1|0.28|ENSG00000140279|chr15:45095015-45095015|T/A|missense_variant'] 61707 23899 LKYLNKIKPP True NCI_RA007_Epitope_Rep3 1212.7594293284799 1212.75778490379 103.55 3 -1.298284120344003 0.3876783555018138 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 118559 14180 TYQRHYRNVFH True NCI_RA007_Epitope_Rep2 1519.74327875371 1519.74218993586 59.819 2 -1.2983002300656123 0.3876783555018138 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 42969 17816 IESQNPLASP True PC9_epitope_Rep5 1054.5294889632999 1054.52838993586 73.548 2 -1.2983487474060738 0.3876810717999565 1.0 ['ENSG00000108256|ENST00000225388|NUFIP2'] 97118 17991 SDLFLGGV True PC9_epitope_Rep4 806.4174193331799 806.41632993586 77.258 2 -1.2983531486133602 0.3876810717999565 1.0 ['NRXN3|p.R291Qfs*26|1|0.31|ENSG00000021645|chr14:78715085-78715086|-/A|frameshift_variant', 'nc|ENSG00000021645|Q9Y4C0-4|NRXN3', 'ENSG00000021645|ENST00000335750|NRXN3', 'nc|ENSG00000021645|Q9Y4C0|NRXN3'] 45842 11806 ISDNAARVL True PC9_epitope_Rep5 957.52434401321 957.52324993586 50.408 2 -1.2983789112853483 0.38768847562966274 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 71372 23881 LYRLRRKLEKN True PC9_epitope_Rep1 1487.9048647755496 1487.90376993586 96.66 2 -1.2984773346303473 0.3877442445347263 1.0 ['ENST00000491144.5_1_3:183855641-183858240:+|nuORF'] 37174 6075 GVQQLPLE True PC9_epitope_Rep1 882.4810822188998 882.47998993586 28.181 2 -1.2985039427259446 0.38775164742155854 1.0 ['ENSG00000092621|ENST00000641023|PHGDH', 'PHGDH|p.H275Qfs*2|1|0.28|ENSG00000092621|chr1:119737144-119737145|-/A|frameshift_variant'] 125782 22129 VKVLDTPA True PC9_epitope_Rep2 841.49091862661 841.48982993586 90.598 2 -1.298554398614442 0.3877785435331955 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 70084 11668 LVNVLQVP True PC9_epitope_Rep1 880.5382031721998 880.53710993586 49.758 2 -1.2985563008191487 0.3877785435331955 1.0 ['ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 899 10021 ADLLNRFLG True NCI_RA007_Epitope_Rep4 1017.5607295219299 1017.55962993586 45.39 2 -1.298669267897887 0.3878101271944673 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 110553 23971 TFPVKGLK True NCI_RA007_Epitope_Rep4 888.5432885526399 888.54218993586 103.94 2 -1.29874604816395 0.3878296195093642 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 91170 2251 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 11.847 3 -1.2988124844572209 0.3878370209164551 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 136966 13271 YAHITHKAL True PC9_epitope_Rep1 1052.5767139392399 1052.57560993586 55.912 2 -1.2988537575141033 0.3878424450516237 1.0 ['ENSG00000198876|ENST00000361264|DCAF12'] 123445 6533 VGNQLIPQ True PC9_epitope_Rep5 867.48141657207 867.48030993586 30.102 2 -1.2989430198563552 0.3878424450516237 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 37300 14215 GVSAATFL True PC9_epitope_Rep2 764.40685464948 764.40630496793 59.945 1 -1.298959613844536 0.3878424450516237 1.0 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL'] 107453 23217 SVLVKDAKFI True PC9_epitope_Rep5 1118.6699456177398 1118.6688499358602 94.287 2 -1.2990781470695751 0.3878424450516237 1.0 ['ENSG00000162669|ENST00000370425|HFM1'] 20446 19989 EPGPPKPGV True PC9_epitope_Rep5 876.4705175352 876.46942993586 81.941 2 -1.299269861966769 0.38793447379556306 1.0 ['ENSG00000125826|ENST00000356286|RBCK1', 'nc|ENSG00000125826|Q9BYM8-3|RBCK1', 'nc|ENSG00000125826|Q9BYM8-4|RBCK1', 'ENST00000382181.2_2_20:389382-402830:+|nuORF'] 16951 12889 EFSIAMKLIK True H1975_Epitope_Rep3 1178.67331674602 1178.67220993586 54.803 2 -1.299444211022684 0.3879929398679852 1.0 ['nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2', 'ENST00000407704.1_1_2:24534520-24550951:-|nuORF', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'ITSN1|p.Q1590Kfs*9|1|0.17|ENSG00000205726|chr21:33885445-33885445|C/-|frameshift_variant', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'ITSN1|p.E686Hfs*57|1|0.07|ENSG00000205726|chr21:33797480-33797481|-/ACATT|frameshift_variant', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'ITSN1|p.G1004Ffs*20|1|0.1|ENSG00000205726|chr21:33819308-33819309|-/TCGTT|frameshift_variant', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1'] 17062 11929 EGGQILKELI True H1975_Epitope_Rep2 1098.62847472858 1098.62736993586 50.963 2 -1.2994779113108024 0.3879929398679852 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant'] 46526 5044 ISYLMIALTV True PC9_epitope_Rep3 1122.63586860814 1122.63421490379 24.489 3 -1.2994872377852096 0.3879929398679852 1.0 ['ENSG00000114023|ENST00000477892|FAM162A'] 64132 13949 LPEPLSVTAP True H1975_Epitope_Rep3 1022.56481184286 1022.56370993586 58.971 2 -1.299507367516286 0.388000338495388 1.0 ['ENST00000264025.7_1_11:119535043-119535469:-|nuORF'] 110859 25952 TGRGGPPP True H1975_Epitope_Rep3 737.3820368839699 737.3814849679301 108.09 1 -1.2996272611587139 0.38803191489361705 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 61956 12031 LLDLPTVVP True H1975_Epitope_Rep1 965.57973363101 965.57862993586 51.287 2 -1.2998361759309778 0.3881071540823481 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 105819 16979 SSLELPYTPPL True H1975_Epitope_Rep1 1215.63870505911 1215.6376099358602 70.733 2 -1.2998659666007002 0.3881071540823481 1.0 ['ENSG00000075568|ENST00000186436|TMEM131'] 8885 13957 AVFPSIVG True NCI_RA007_Epitope_Rep3 788.4432401582 788.44214993586 62.215 2 -1.300019128824261 0.3881749936535184 1.0 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 112316 19448 TKYKIMKFKS True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.7247549037902 81.694 3 -1.300109749352784 0.3881944780233064 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 69915 19445 LVIYAIFSQWR True PC9_epitope_Rep3 1394.7710566413398 1394.76940490379 80.021 3 -1.3001674912998291 0.3882018736778483 1.0 ['A2ML1|p.P541Sfs*8|1|0.19|ENSG00000166535|chr12:8846154-8846155|-/T|frameshift_variant'] 130087 9173 VSDLGSLLLQ True NCI_RA007_Epitope_Rep4 1043.58627556343 1043.5851699358602 42.124 2 -1.300240738877907 0.38822135725165 1.0 ['ENST00000549198.1_1_12:53342525-53343518:-|nuORF', 'ENST00000551318.1_1_12:53342525-53343546:-|nuORF'] 21696 25155 ERSLKAIRPYH True NCI_RA007_Epitope_Rep5 1368.76261721596 1368.7615299358602 104.26 2 -1.3002990520070228 0.38822875240248045 1.0 ['ENSG00000103148|ENST00000611875|NPRL3'] 59359 18432 LFLAAFAV True PC9_epitope_Rep1 850.4952757310599 850.49416993586 75.689 2 -1.3003838409201653 0.38824823518035007 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 22551 17720 ETILLLPT True NCI_RA007_Epitope_Rep5 898.53753446586 898.53642993586 74.941 2 -1.3004638776839796 0.3882852066285521 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.V2355Efs*4|1|0.49|ENSG00000165323|chr11:92800524-92800545|AGGTGAGAGAGAACGTGGCTGC/-|frameshift_variant', 'FAT3|p.P2979Lfs*22|1|0.16|ENSG00000165323|chr11:92809976-92809976|C/-|frameshift_variant', 'FAT3|p.H1979Tfs*13|1|0.35|ENSG00000165323|chr11:92799397-92799397|C/-|frameshift_variant'] 91683 20157 RIYQELVT True PC9_epitope_Rep6 1020.5603951687599 1020.55928993586 90.206 2 -1.3004856828757883 0.3882852066285521 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 59923 12129 LGGPNPGSRGL True PC9_epitope_Rep2 1023.5461420869499 1023.54504993586 51.964 2 -1.3005302608938476 0.3882852066285521 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 84748 4721 QDSYGTRL True PC9_epitope_Rep1 938.4457593393399 938.44466993586 23.029 2 -1.300530568015417 0.3882852066285521 1.0 ['ENST00000242108.8_1_7:36320796-36324343:+|nuORF'] 134897 3483 VYVRLRPFFR True NCI_RA007_Epitope_Rep4 1351.7877097649896 1351.78606490379 19.345 3 -1.3005331336801187 0.3882852066285521 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 36883 17015 GVLLVMLIF True H1975_Epitope_Rep3 1003.6140109647499 1003.6134749679301 71.043 1 -1.3006288337578935 0.3882953007155289 1.0 ['MS4A7|p.V186L|1|0.23|ENSG00000166927|chr11:60392694-60392694|G/T|missense_variant'] 29781 22077 FVPFSFSLL True PC9_epitope_Rep6 1055.56916894731 1055.5680699358602 97.855 2 -1.3006425545900822 0.3882953007155289 1.0 ['ENSG00000185344|ENST00000330342|ATP6V0A2', 'ENST00000543687.1_1_12:124241315-124242576:+|nuORF'] 94929 6173 RTFWYWNYNYY True H1975_Epitope_Rep3 1674.7255630008997 1674.72391490379 28.755 3 -1.3006603302368989 0.3882953007155289 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 104672 7219 SQTQKAKFS True NCI_RA007_Epitope_Rep4 1023.5349086969098 1023.53380993586 34.4 2 -1.3007450324665484 0.38832088560172096 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 44262 8548 ILADIFELFA True PC9_epitope_Rep5 1150.62741209942 1150.62577490379 37.824 3 -1.3007945017829827 0.38832088560172096 1.0 ['CMTR2|p.L497Wfs*9|1|0.25|ENSG00000180917|chr16:71284431-71284431|A/-|frameshift_variant', 'CMTR2|p.M188Wfs*24|1|0.78|ENSG00000180917|chr16:71285360-71285360|A/-|frameshift_variant', 'CMTR2|p.S423Ifs*2|1|0.28|ENSG00000180917|chr16:71284654-71284655|-/T|frameshift_variant', 'ENSG00000180917|ENST00000434935|CMTR2'] 123360 22748 VGLYRVKAIY True PC9_epitope_Rep5 1180.6968290719199 1180.69572993586 92.506 2 -1.3008986812295693 0.38832088560172096 1.0 ['ENST00000320201.8_1_12:123469038-123469122:-|nuORF'] 67711 15694 LSWRCACPRPR True PC9_epitope_Rep6 1343.6703141375897 1343.6692099358602 72.577 2 -1.3009203403876788 0.38832088560172096 1.0 ['ENST00000356994.6_1_8:144874301-144875165:-|nuORF', 'ENST00000526832.5_1_8:144874301-144875165:-|nuORF'] 6999 6073 AQLPSPAID True PC9_epitope_Rep4 910.47599683846 910.47488993586 30.361 2 -1.300931932278685 0.38832088560172096 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 12501 22233 DKEYNKCEM True PC9_epitope_Rep1 1158.46854558286 1158.46690490379 90.342 3 -1.3009556749384394 0.38832088560172096 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'HYDIN|p.I1870Kfs*10|1|0.33|ENSG00000157423|chr16:70970523-70970530|TTCTTCTA/-|frameshift_variant', 'HYDIN|p.Q2268Rfs*6|1|0.09|ENSG00000157423|chr16:70941687-70941687|G/-|frameshift_variant', 'HYDIN|p.R2422Gfs*41|1|0.09|ENSG00000157423|chr16:70921112-70921112|T/-|frameshift_variant', 'HYDIN|p.D1530N|1|0.1|ENSG00000157423|chr16:70978964-70978964|C/T|missense_variant'] 8048 15852 ATDPNSEWKEH True H1975_Epitope_Rep3 1312.56839365316 1312.5672899358601 66.424 2 -1.3009869262980545 0.38832088560172096 1.0 ['nc|ENSG00000107021|Q9NVG8-3|TBC1D13', 'ENSG00000107021|ENST00000372648|TBC1D13'] 35477 6623 GSLESIAEHV True H1975_Epitope_Rep2 1040.5138388991597 1040.51274993586 30.384 2 -1.3010051722923197 0.38832088560172096 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 77412 26076 NSIINTPLK True PC9_epitope_Rep1 998.5760452329 998.57494993586 105.55 2 -1.3010232416555063 0.38832088560172096 1.0 ['nc|ENSG00000112701|Q9GZR1-2|SENP6', 'ENSG00000112701|ENST00000447266|SENP6'] 81407 15577 PLEFEWYF True PC9_epitope_Rep5 1129.51204799401 1129.51039490379 64.927 3 -1.3011097610622222 0.38832088560172096 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 131341 13633 VTGNAKAG True NCI_RA007_Epitope_Rep5 716.3817025308 716.38115496793 59.124 1 -1.301118161269625 0.388323584860057 1.0 ['ENST00000507587.1_1_5:176965994-176980212:-|nuORF'] 63074 14229 LLQKQPRPWLW True NCI_RA007_Epitope_Rep2 1463.8401392606697 1463.8390499358602 60.008 2 -1.301124535631384 0.388323584860057 1.0 ['ENST00000541110.5_2_6:42330765-42418997:-|nuORF'] 94207 25701 RRPPVPHP True PC9_epitope_Rep1 954.55116789774 954.55006993586 103.9 2 -1.3011507902529702 0.3883262839879154 1.0 ['ENST00000340611.8_1_7:2581050-2581406:-|nuORF'] 131657 14964 VTLTSIVP True PC9_epitope_Rep4 828.49566965388 828.49456993586 65.497 2 -1.301153311488664 0.3883262839879154 1.0 ['ENSG00000165912|ENST00000298838|PACSIN3'] 61691 25621 LKVSRPRAP True NCI_RA007_Epitope_Rep1 1022.6348975216998 1022.6338099358601 106.04 2 -1.3012296258701377 0.38838201351041074 1.0 ['ENST00000370339.7_1_20:61834750-61835101:-|nuORF', 'YTHDF1|p.S137Lfs*44|1|0.22|ENSG00000149658|chr20:63203532-63203532|C/-|frameshift_variant', 'nc|ENSG00000149658|Q9BYJ9-2|YTHDF1'] 98317 4715 SEVSQLNHIA True H1975_Epitope_Rep2 1096.55128703704 1096.55018993586 23.227 2 -1.3012573748611789 0.3883847111282975 1.0 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A'] 41488 2260 HYLRSPMHHL True NCI_RA007_Epitope_Rep5 1289.64514493557 1289.64349490379 12.818 3 -1.3013378986668984 0.3883847111282975 1.0 ['ENST00000397872.5_1_22:29945099-29949566:-|nuORF'] 86458 11184 QKQLQIIVK True NCI_RA007_Epitope_Rep4 1096.6968290719199 1096.69572993586 49.904 2 -1.301505371175516 0.38845791343435077 1.0 ['ENSG00000138161|ENST00000392790|CUZD1', 'nc|ENSG00000138161|Q86UP6-2|CUZD1', 'CUZD1|p.L418Ffs*10|1|0.45|ENSG00000138161|chr10:122834834-122834835|-/A|frameshift_variant'] 86876 6301 QLRFWKHWHSR True NCI_RA007_Epitope_Rep5 1579.8272831611898 1579.82563490379 30.915 3 -1.30152562179061 0.38845791343435077 1.0 ['nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 73401 22072 MTLGMIWTI True PC9_epitope_Rep2 1064.53986004832 1064.53876993586 90.373 2 -1.3015569586585598 0.38845791343435077 1.0 ['ENSG00000130402|ENST00000252699|ACTN4', 'ACTN4|p.D874Rfs*17|1|0.27|ENSG00000130402|chr19:38729309-38729310|-/C|frameshift_variant', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'ACTN2|p.P167Lfs*5|1|0.05|ENSG00000077522|chr1:236725983-236725983|C/-|frameshift_variant', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 130984 7940 VTDNKIQINAK True NCI_RA007_Epitope_Rep2 1242.6932002434598 1242.6921099358601 35.516 2 -1.301602475223173 0.38845791343435077 1.0 ['ENSG00000165506|ENST00000298292|DNAAF2'] 77406 20954 NSHLIVHKRIH True H1975_Epitope_Rep1 1352.77893598644 1352.7772949037899 87.045 3 -1.301616334638223 0.38845791343435077 1.0 ['ENSG00000166704|ENST00000551380|ZNF606'] 16814 6960 EEVYVKVDLR True H1975_Epitope_Rep1 1248.6714021697198 1248.6703099358601 31.811 2 -1.3016778524014596 0.38847269212179797 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-3|EIF2AK4', 'EIF2AK4|p.A725Pfs*66|1|0.18|ENSG00000128829|chr15:39976768-39976768|G/-|frameshift_variant'] 94927 6044 RTFWYWNYNYY True H1975_Epitope_Rep1 1674.7255630008997 1674.72391490379 28.32 3 -1.3017180045177164 0.38847269212179797 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 78689 11096 NYYSTLSFT True PC9_epitope_Rep2 1094.49204082542 1094.49094993586 48.005 2 -1.3018514085223165 0.3885237186148232 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 110578 5593 TFRPSTESVQ True NCI_RA007_Epitope_Rep4 1150.56185172074 1150.56019490379 28.113 3 -1.3018565183459347 0.3885237186148232 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1'] 68799 14334 LTLNLNLSL True PC9_epitope_Rep6 999.59644632431 999.59534993586 67.034 2 -1.3018714347755975 0.38853110689559345 1.0 ['ENST00000581549.1_1_17:70599690-70599849:-|nuORF'] 76118 1048 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 5.8042 3 -1.3019119434232576 0.38855057754579286 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 91943 6725 RKMYKEFLSK True H1975_Epitope_Rep1 1328.7274775772 1328.7258449037902 30.911 3 -1.302115991450658 0.38860898667343263 1.0 ['PRKAR1B|p.E247K|1|0.22|ENSG00000188191|chr7:584538-584538|C/T|missense_variant'] 80993 7345 PIITAAAP True H1975_Epitope_Rep3 752.4432401582 752.44214993586 33.229 2 -1.302157603644878 0.38860898667343263 1.0 ['ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.E2290Kfs*32|1|0.41|ENSG00000167548|chr12:49040902-49040902|C/-|frameshift_variant', 'KMT2D|p.P2354Lfs*30|1|0.08|ENSG00000167548|chr12:49040709-49040709|G/-|frameshift_variant'] 118039 9177 TYFAIDSSTG True PC9_epitope_Rep2 1060.47130538084 1060.47020993586 40.638 2 -1.3021612809042131 0.38860898667343263 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.H1817R|1|0.18|ENSG00000083857|chr4:186621136-186621136|T/C|missense_variant'] 83092 4311 PSNQVVVQT True NCI_RA007_Epitope_Rep3 970.5083595958998 970.50726993586 23.695 2 -1.302258381058298 0.38863584192149236 1.0 ['ENSG00000123268|ENST00000262053|ATF1', 'nc|ENSG00000123268|P18846-2|ATF1'] 86684 16465 QLIEKITQV True PC9_epitope_Rep5 1070.63356010902 1070.6324699358602 68.331 2 -1.302264894613218 0.38863584192149236 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1', 'ENST00000472131.5_1_1:15653545-15656069:+|nuORF', 'ENST00000459961.1_1_1:15653545-15655159:+|nuORF'] 119428 8115 VAQLPLSLK True NCI_RA007_Epitope_Rep2 967.60661708519 967.60552993586 36.198 2 -1.3023092732645896 0.38866739156699287 1.0 ['ENSG00000221890|ENST00000333039|NPTXR'] 132799 17408 VVKKKKFKL True NCI_RA007_Epitope_Rep4 1116.7746854697998 1116.7741749679299 75.38 1 -1.3023478939027042 0.3886747773978809 1.0 ['ENSG00000053918|ENST00000155840|KCNQ1', 'nc|ENSG00000053918|P51787-2|KCNQ1'] 138739 8920 YIRKNVIPH True PC9_epitope_Rep4 1138.66111226954 1138.65946490379 41.852 3 -1.3024218628373951 0.3886942444304837 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'nc|ENSG00000081177|Q9NVH0-2|EXD2'] 122930 24601 VGHSAGHP True NCI_RA007_Epitope_Rep1 760.36163579256 760.36052993586 101.89 2 -1.3026196329734612 0.38871170387551945 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 27686 21463 FPIVDIKV True PC9_epitope_Rep6 929.5586042636099 929.55750993586 95.432 2 -1.3026379608279246 0.38871170387551945 1.0 ['ENST00000380152.7_1_13:32899218-32899257:+|nuORF'] 27393 11538 FLVPTGVP True PC9_epitope_Rep1 828.4745402864799 828.47344993586 49.26 2 -1.3026522012593722 0.38871170387551945 1.0 ['nc|ENSG00000182667|Q9P121-3|NTM', 'nc|ENSG00000182667|Q9P121|NTM', 'nc|ENSG00000182667|Q9P121-4|NTM', 'ENST00000479431.1_1_11:131781360-132016587:+|nuORF', 'nc|ENSG00000183715|Q14982-4|OPCML', 'nc|ENSG00000183715|Q14982|OPCML'] 82191 12210 PNTVWTIGYWL True H1975_Epitope_Rep3 1348.6815729306 1348.6804699358602 52.138 2 -1.3027002947254887 0.38871170387551945 1.0 ['ENSG00000181072|ENST00000680005|CHRM2'] 73884 10386 NAVGEYRAP True PC9_epitope_Rep5 975.4773938207899 975.47628993586 44.933 2 -1.3027791601622636 0.3887190886357321 1.0 ['ENST00000494660.6_1_2:71356995-71357340:-|nuORF'] 5496 8851 ALYFILVM True NCI_RA007_Epitope_Rep2 968.5405116713199 968.53940993586 39.076 2 -1.3027909626354004 0.3887264732175216 1.0 ['ENSG00000198743|ENST00000381151|SLC5A3'] 142466 19073 YYHHDWFIFKE True H1975_Epitope_Rep1 1583.7197493444698 1583.7186499358602 79.498 2 -1.3028610074292488 0.3887338576208942 1.0 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3'] 116021 16379 TSLRVGRK True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56030993586 72.155 2 -1.3029289836461457 0.38873654582573297 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 107729 21191 SVSFSPLFIFQ True NCI_RA007_Epitope_Rep4 1270.65977485686 1270.6586699358602 91.88 2 -1.3029435065385462 0.38873654582573297 1.0 ['ENST00000548283.6_1_12:112373822-112373960:-|nuORF'] 7023 21549 AQPIFGAIA True PC9_epitope_Rep3 886.4912529797798 886.49014993586 88.183 2 -1.3029869971814567 0.3887633934503461 1.0 ['ENST00000361716.7_1_12:6572127-6572325:-|nuORF'] 26633 18702 FINWGNLN True PC9_epitope_Rep1 976.4766655448 976.47556993586 76.727 2 -1.3029947841427332 0.3887633934503461 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 4837 18681 ALEKHEVRDYL True H1975_Epitope_Rep1 1371.7146639640298 1371.71356993586 77.904 2 -1.3030085764421488 0.3887667592704433 1.0 ['ENST00000216294.4_1_14:62229123-62233722:+|nuORF'] 55887 7914 LAQFRHSMSPR True H1975_Epitope_Rep1 1328.67717333984 1328.6760699358601 35.395 2 -1.3030324592026306 0.3887667592704433 1.0 ['ENST00000333617.8_1_3:115805179-115805335:-|nuORF'] 74658 17122 NGLTRHRR True NCI_RA007_Epitope_Rep3 1008.5689432202 1008.56784993586 75.221 2 -1.3030338655022666 0.3887667592704433 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 616 5975 AASCLENNFF True NCI_RA007_Epitope_Rep4 1114.47534521546 1114.4742499358601 29.603 2 -1.3030543594915571 0.3887667592704433 1.0 ['ENST00000256015.4_1_12:92539441-92539582:-|nuORF'] 117214 5309 TVLLLPLLLL True PC9_epitope_Rep5 1106.76786875386 1106.76676993586 25.433 2 -1.3030607545522805 0.3887667592704433 1.0 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155106165-155106540:+|nuORF'] 10626 8466 CNWKMKYVTF True PC9_epitope_Rep5 1318.62023562734 1318.6191299358602 37.507 2 -1.3030933751558615 0.3887667592704433 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 34476 12251 GPLETEEY True H1975_Epitope_Rep3 936.40764249512 936.4070949679301 52.301 1 -1.3032336244604685 0.3887667592704433 1.0 ['LILRB5|p.L365Afs*11|1|0.24|ENSG00000105609|chr19:54254898-54254899|-/G|frameshift_variant', 'nc|ENSG00000105609|O75023-2|LILRB5', 'nc|ENSG00000105609|O75023|LILRB5', 'ENSG00000105609|ENST00000449561|LILRB5', 'LILRB5|p.D61N|1|0.59|ENSG00000105609|chr19:54256663-54256663|C/T|missense_variant'] 91389 23478 RHFPKHTG True H1975_Epitope_Rep1 978.5147823890198 978.51368993586 97.558 2 -1.303374855855874 0.38881037793963114 1.0 ['KLF6|p.R252P|1|0.23|ENSG00000067082|chr10:3780151-3780151|C/G|missense_variant'] 104600 23105 SQRQIRKSR True PC9_epitope_Rep1 1157.67413656473 1157.67302993586 93.675 2 -1.3034867075153982 0.38882983863175186 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 45236 22777 IPTLRPGTF True PC9_epitope_Rep3 1000.57056592964 1000.56946993586 92.881 2 -1.3036418966359724 0.38889291494552747 1.0 ['RTN4RL2|p.R73P|1|0.08|ENSG00000186907|chr11:57467795-57467795|G/C|missense_variant'] 73968 4002 NCPSFALH True PC9_epitope_Rep5 887.3959726959499 887.39486993586 20.472 2 -1.3036705474739059 0.38889291494552747 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 20271 11899 ENQKLLQELK True H1975_Epitope_Rep3 1241.69795127073 1241.6968499358602 50.922 2 -1.3037732872932173 0.3889197545775158 1.0 ['ENSG00000165325|ENST00000298050|DEUP1'] 47788 9776 IYFGFIPEI True PC9_epitope_Rep1 1097.57973363101 1097.5786299358601 42.464 2 -1.3037787469832045 0.3889197545775158 1.0 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 32461 19979 GGAKRGGG True PC9_epitope_Rep4 658.3510711088599 658.35052496793 84.981 1 -1.3038682709245921 0.38892981799297094 1.0 ['ENST00000552360.3_1_19:47777847-47777964:+|nuORF'] 135258 17060 WFQGDQPTNNL True PC9_epitope_Rep1 1318.5942144781798 1318.59256490379 70.447 3 -1.3038827364887677 0.38892981799297094 1.0 ['COL6A3|p.K2846N|1|0.11|ENSG00000163359|chr2:237339044-237339044|C/A|missense_variant'] 59886 6255 LGGENHQGRL True NCI_RA007_Epitope_Rep2 1079.54720471611 1079.5461099358602 28.935 2 -1.3039105986268877 0.38892981799297094 1.0 ['ENST00000563358.5_1_16:78133737-78143702:+|nuORF'] 15435 7219 EALESGVF True PC9_epitope_Rep4 850.4072485722999 850.40614993586 35.073 2 -1.3039399241041 0.38894457796403425 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF', 'ENST00000545015.1_1_12:133249164-133249818:-|nuORF'] 63163 23688 LLRPNLFHERK True PC9_epitope_Rep2 1421.82555182569 1421.82444993586 96.589 2 -1.3039629707767884 0.38894457796403425 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 37166 21660 GVQNVLKKHQA True PC9_epitope_Rep4 1220.69895433024 1220.6978499358602 91.506 2 -1.3040030982851074 0.3889519576821816 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 124908 18372 VHQAKLKEVR True NCI_RA007_Epitope_Rep3 1206.71968977482 1206.7180349037899 80.453 3 -1.3041297730783712 0.3889801241336006 1.0 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 116583 17192 TVAAANCL True NCI_RA007_Epitope_Rep1 761.37417462221 761.37362496793 71.005 1 -1.3041352641977901 0.3889801241336006 1.0 ['ENST00000435723.1_1_7:135661976-135662093:-|nuORF'] 96358 4162 RYTKLPRRVAE True NCI_RA007_Epitope_Rep2 1387.8048163811097 1387.80316490379 20.829 3 -1.3041559240255893 0.3889801241336006 1.0 ['ENSG00000164961|ENST00000318410|WASHC5', 'ENST00000519042.2_1_8:126036861-126044688:-|nuORF'] 32551 5379 GGGKGVWL True PC9_epitope_Rep4 772.4231734199599 772.42206993586 27.417 2 -1.3041719846666955 0.3889801241336006 1.0 ['ENST00000475826.1_1_6:32121346-32121991:-|nuORF'] 56503 12691 LDFHEQPV True PC9_epitope_Rep5 983.4712458111898 983.47014993586 53.821 2 -1.3042060619307627 0.3889801241336006 1.0 ['ENSG00000075568|ENST00000186436|TMEM131'] 43633 8307 IGWSWERKWEK True NCI_RA007_Epitope_Rep2 1503.7622828627898 1503.76118993586 36.951 2 -1.3042330480356712 0.3889801241336006 1.0 ['ENST00000237172.11_1_6:76203231-76203315:-|nuORF'] 48317 10818 IYRFTQEDLRK True NCI_RA007_Epitope_Rep2 1467.78341223019 1467.7823099358602 46.682 2 -1.3042792167505017 0.3889801241336006 1.0 ['ENSG00000173546|ENST00000308508|CSPG4', 'CSPG4|p.I1475Hfs*33|1|0.27|ENSG00000173546|chr15:75684762-75684763|-/G|frameshift_variant'] 74320 17071 NELNQWLS True PC9_epitope_Rep5 1002.4770594676199 1002.47596993586 70.683 2 -1.304326415590463 0.3889801241336006 1.0 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF', 'ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1'] 98231 8551 SEVAHVDQLF True H1975_Epitope_Rep3 1143.5560380643099 1143.5549499358601 37.88 2 -1.304390752269077 0.3889801241336006 1.0 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1', 'ENST00000463774.1_1_1:150900190-150900451:+|nuORF', 'ENST00000487584.6_1_1:150898772-150913809:+|nuORF', 'SETDB1|p.L218Pfs*18|1|0.24|ENSG00000143379|chr1:150942664-150942665|-/C|frameshift_variant', 'nc|ENSG00000143379|Q15047-2|SETDB1'] 140604 19233 YRRGRRQLQLL True NCI_RA007_Epitope_Rep3 1457.8691479731697 1457.8675049037902 83.961 3 -1.304394034967762 0.3889801241336006 1.0 ['ENSG00000205138|ENST00000378887|SDHAF1'] 11619 6001 DGHSAWTG True PC9_epitope_Rep5 829.3354806143701 829.33438993586 28.078 2 -1.3044056544470486 0.3889801241336006 1.0 ['ENST00000509268.1_1_5:82400738-82554497:+|nuORF', 'nc|ENSG00000152422|Q13426-3|XRCC4', 'ENST00000542685.5_1_5:82400738-82606644:+|nuORF', 'ENSG00000152422|ENST00000396027|XRCC4', 'nc|ENSG00000152422|Q13426|XRCC4'] 12408 7982 DITSDITSWEG True H1975_Epitope_Rep1 1222.5353621893798 1222.53426993586 35.652 2 -1.3044095631974306 0.3889801241336006 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 21022 16854 EQSPKPWDEQR True H1975_Epitope_Rep1 1398.65279198346 1398.65168993586 70.238 2 -1.3046199998161856 0.38905995290708206 1.0 ['ENST00000510102.5_1_6:43483884-43484699:-|nuORF', 'ENST00000490447.6_1_6:43483884-43484699:-|nuORF'] 91163 703 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 3.7342 3 -1.3047307282775569 0.38911562982998454 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 37178 10729 GVQREEVP True PC9_epitope_Rep3 912.4664947839199 912.46538993586 46.224 2 -1.3047441342482198 0.3891350809616383 1.0 ['CON__Q2UVX4'] 104765 13942 SQVYIDGSI True PC9_epitope_Rep5 980.4814761417199 980.48036993586 58.649 2 -1.3047950503791155 0.389161907291805 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 80961 26115 PIFPWYAFQL True NCI_RA007_Epitope_Rep5 1280.65938093404 1280.65828993586 108.03 2 -1.3048047578884248 0.389161907291805 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 405 16540 AALEHGTA True PC9_epitope_Rep3 768.37661715036 768.37552993586 68.76 2 -1.3048789577724003 0.38916928278193674 1.0 ['ENST00000263116.6_1_22:23504435-23504693:+|nuORF'] 113237 10145 TLQSFQFDFI True H1975_Epitope_Rep1 1244.6077392839998 1244.60664993586 43.961 2 -1.3049588617215646 0.389208181401077 1.0 ['OPHN1|p.K700Rfs*7|1|0.44|ENSG00000079482|chrX:68063915-68063915|G/-|frameshift_variant', 'ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 91274 20043 RGKTLHKVKTT True H1975_Epitope_Rep2 1267.77245362367 1267.7707949037901 83.075 3 -1.3049653375243084 0.389208181401077 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 60968 10012 LIDRSSAP True PC9_epitope_Rep1 857.4606811274899 857.45958993586 43.377 2 -1.3050440905945078 0.38923970394697127 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 122720 14955 VGGHLCQQ True PC9_epitope_Rep6 840.3912216686801 840.39012993586 69.533 2 -1.3052187316065655 0.3893074471167777 1.0 ['MUC5B|p.A1536V|1|0.21|ENSG00000117983|chr11:1241487-1241487|C/T|missense_variant'] 141515 9037 YTLIDYNI True PC9_epitope_Rep5 1013.50696261357 1013.50586993586 39.706 2 -1.305463959213983 0.38931749308800273 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 102643 18774 SLWSSVTEKIL True H1975_Epitope_Rep3 1261.69180326113 1261.69070993586 78.74 2 -1.3054846092644639 0.38931749308800273 1.0 ['MOV10L1|p.T411Pfs*27|1|0.15|ENSG00000073146|chr22:50115214-50115214|A/-|frameshift_variant'] 73966 3856 NCPSFALH True PC9_epitope_Rep4 887.3959726959499 887.39486993586 21.005 2 -1.3055209737914033 0.38931749308800273 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 92611 6530 RMWKRQQQKWE True H1975_Epitope_Rep1 1602.8201491754196 1602.8190499358602 30.175 2 -1.305574812145687 0.38933693919930457 1.0 ['ENSG00000150687|ENST00000280258|PRSS23', 'nc|ENSG00000150687|O95084-2|PRSS23'] 138655 14693 YIHNIKDMKLL True PC9_epitope_Rep1 1386.7693423891799 1386.76824993586 61.338 2 -1.305707593164852 0.3893805309734513 1.0 ['ENST00000586815.1_1_17:66429656-66453562:-|nuORF', 'ENST00000589459.5_1_17:66423364-66453609:-|nuORF', 'nc|ENSG00000070540|Q5MNZ9-2|WIPI1', 'ENSG00000070540|ENST00000262139|WIPI1'] 130412 23876 VSLRRRSRFRR True PC9_epitope_Rep1 1487.9021794369498 1487.90053490379 96.64 3 -1.3057392818970333 0.38939997585415914 1.0 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 69767 25053 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 104.93 3 -1.3058638397886588 0.3894314930400454 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 112623 12928 TLEVTLRDF True PC9_epitope_Rep1 1092.5815245361598 1092.5804299358601 54.599 2 -1.3059286773304137 0.3894395016719582 1.0 ['ENSG00000091106|ENST00000402280|NLRC4'] 135955 19705 WQEWKQPRRDR True H1975_Epitope_Rep3 1583.8069416394296 1583.8058499358601 82.524 2 -1.3059453289555631 0.3894395016719582 1.0 ['ENST00000430935.5_1_7:138875731-138875803:+|nuORF'] 25936 23100 FFSIHIRI True PC9_epitope_Rep5 1031.59163572739 1031.59052993586 93.842 2 -1.3060028464342284 0.3894395016719582 1.0 ['CYBB|p.Y425*|1|0.29|ENSG00000165168|chrX:37805129-37805129|C/-|frameshift_variant', 'ENSG00000165168|ENST00000378588|CYBB', 'CYBB|p.V358L|1|0.08|ENSG00000165168|chrX:37804051-37804051|G/C|missense_variant', 'CYBB|p.V358F|1|0.23|ENSG00000165168|chrX:37804051-37804051|G/T|missense_variant'] 86920 6719 QLSTSTSILTD True PC9_epitope_Rep5 1164.58739776224 1164.58630993586 30.815 2 -1.3060488597695696 0.3894395016719582 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-2|MLXIP'] 74713 15643 NGVAKLTS True NCI_RA007_Epitope_Rep5 788.4392174069201 788.43812993586 66.878 2 -1.3060593280554218 0.3894395016719582 1.0 ['ENST00000457253.1_1_6:28805954-28806077:-|nuORF'] 70550 19082 LVYRFRKKA True NCI_RA007_Epitope_Rep5 1179.72404687927 1179.72241490379 80.27 3 -1.3060966104065246 0.3894395016719582 1.0 ['ENST00000333050.6_1_16:8889558-8889804:-|nuORF'] 97365 7652 SEDLEARNETL True H1975_Epitope_Rep3 1275.59427404783 1275.59316993586 34.415 2 -1.306103999361232 0.3894468722084068 1.0 ['nc|ENSG00000130783|Q6P9F0-2|CCDC62', 'ENSG00000130783|ENST00000253079|CCDC62', 'CCDC62|p.E276Nfs*10|1|0.07|ENSG00000130783|chr12:122797358-122797358|A/-|frameshift_variant'] 101399 13393 SLKLRYEEA True PC9_epitope_Rep1 1107.5924235730301 1107.5913299358601 56.376 2 -1.3061957045386665 0.389464281403153 1.0 ['ENSG00000138592|ENST00000307179|USP8'] 76314 8794 NPRRWWRWCWQ True NCI_RA007_Epitope_Rep1 1672.7946031339197 1672.7935099358601 38.209 2 -1.3061961326924878 0.389464281403153 1.0 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 2014 13978 AEIYGGYAAY True H1975_Epitope_Rep2 1076.48147614172 1076.4803699358602 58.913 2 -1.306198675713236 0.389464281403153 1.0 ['nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 84090 17756 PWLFIPLP True H1975_Epitope_Rep2 981.5687750244899 981.56766993586 73.618 2 -1.3062097839603855 0.389464281403153 1.0 ['ENST00000479872.5_1_1:165879160-165879211:+|nuORF'] 87535 20280 QQITGHGG True H1975_Epitope_Rep3 796.38276515996 796.38166993586 84.811 2 -1.3064389657215616 0.3894790208101975 1.0 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 81967 16703 PLTLSPAAPA True PC9_epitope_Rep2 936.5280324113198 936.52748496793 69.496 1 -1.3064500745578629 0.3894790208101975 1.0 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 34649 8220 GQARVVPY True NCI_RA007_Epitope_Rep4 888.4817509252398 888.48064993586 38.406 2 -1.3066075681126208 0.3895105317158549 1.0 ['KLHDC3|p.P71R|1|0.09|ENSG00000124702|chr6:43017576-43017576|C/G|missense_variant'] 37460 12131 GVTRTEFP True PC9_epitope_Rep3 905.4606811274899 905.45958993586 51.704 2 -1.3067198403928169 0.3895373399157483 1.0 ['ENST00000394518.6_1_15:86290571-86290709:+|nuORF'] 22762 5172 ETVKQGFQEKA True H1975_Epitope_Rep3 1263.6459156978697 1263.64426490379 24.994 3 -1.306740317347283 0.3895373399157483 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 132424 22684 VVARTLGG True NCI_RA007_Epitope_Rep3 771.4602872046698 771.45918993586 98.619 2 -1.3067568874549036 0.38955677867902666 1.0 ['IRS4|p.G575Dfs*36|1|0.72|ENSG00000133124|chrX:108734621-108734621|C/-|frameshift_variant'] 55199 17727 LACLCPLWRRR True NCI_RA007_Epitope_Rep2 1385.7536498387299 1385.75254993586 73.694 2 -1.3068214803439808 0.3895715147857574 1.0 ['NTSR1|p.V385L|1|0.18|ENSG00000101188|chr20:62760163-62760163|G/T|missense_variant'] 11459 5677 DFDSDEDFNAF True NCI_RA007_Epitope_Rep3 1320.4782412360798 1320.47659490379 29.313 3 -1.3068240294364026 0.3895715147857574 1.0 ['XPO5|p.V865Afs*14|1|0.04|ENSG00000124571|chr6:43530765-43530771|TCCTCCA/-|frameshift_variant', 'XPO5|p.L872Ifs*16|1|0.08|ENSG00000124571|chr6:43530751-43530752|-/GAAGAGATGAGATTATGTAT|frameshift_variant', 'ENSG00000124571|ENST00000265351|XPO5'] 44175 22255 IIVPLVVFLPR True PC9_epitope_Rep5 1264.82711496548 1264.8260099358602 90.611 2 -1.3068690440820006 0.38957418046637377 1.0 ['ENST00000435683.6_1_19:1042703-1043196:+|nuORF'] 66499 9734 LSHFVIQV True PC9_epitope_Rep1 941.5334521449298 941.53234993586 42.299 2 -1.3068943042145227 0.38957418046637377 1.0 ['ENST00000329286.6_1_18:8638280-8638382:+|nuORF'] 122152 20902 VGAGHGAG True PC9_epitope_Rep6 624.29797290684 624.29742496793 93.172 1 -1.3071156370024781 0.38963249049544385 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 11435 5428 DEWTPRQQVKP True NCI_RA007_Epitope_Rep1 1382.6942628726201 1382.69260490379 25.185 3 -1.3071340176232016 0.38963249049544385 1.0 ['PRDM9|p.E93D|1|0.17|ENSG00000164256|chr5:23510005-23510005|A/T|missense_variant'] 49751 12155 KGRWNTKIRTA True PC9_epitope_Rep5 1329.7629515691299 1329.76184993586 51.743 2 -1.3071351374209441 0.38963249049544385 1.0 ['ENST00000589718.5_1_12:12232564-12240182:+|nuORF'] 93673 25612 RQRVLRVF True NCI_RA007_Epitope_Rep2 1072.6617809758798 1072.66068993586 108.29 2 -1.3071706419247602 0.3896451846488052 1.0 ['OR52L1|p.K328N|1|0.33|ENSG00000183313|chr11:5985947-5985947|C/A|missense_variant', 'ENSG00000183313|ENST00000332249|OR52L1'] 46380 11556 ISRWFEVERRE True NCI_RA007_Epitope_Rep2 1505.77391017565 1505.77280993586 49.539 2 -1.30720670613548 0.3896451846488052 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 7693 13242 ASLRPTLLAGL True NCI_RA007_Epitope_Rep1 1110.67609362734 1110.6749899358601 55.508 2 -1.3072377742549326 0.3896451846488052 1.0 ['ENST00000371933.7_1_1:47184331-47184493:-|nuORF'] 80100 22392 PFLVMIIK True PC9_epitope_Rep2 959.58779621691 959.58668993586 91.625 2 -1.30725447834438 0.3896451846488052 1.0 ['ENST00000562622.5_1_16:58149118-58163019:-|nuORF', 'ENSG00000070761|ENST00000262498|CFAP20', 'ENST00000567092.1_1_16:58149929-58163019:-|nuORF'] 58837 8250 LESRTFIPCT True H1975_Epitope_Rep1 1165.58014463717 1165.5790499358602 36.676 2 -1.3072617067812042 0.3896451846488052 1.0 ['ENST00000258607.9_1_13:53050406-53050451:+|nuORF'] 141708 17687 YTVENLIRI True PC9_epitope_Rep6 1119.62880908175 1119.6277099358601 80.667 2 -1.3075259473239542 0.3896766874645491 1.0 ['LILRA6|p.M451I|1|0.41|ENSG00000244482|chr19:54239046-54239046|C/A|missense_variant', 'LILRA2|p.M453I|1|0.26|ENSG00000239998|chr19:54587253-54587253|G/T|missense_variant'] 38986 20740 HHLLMHHL True NCI_RA007_Epitope_Rep5 1036.5388889618803 1036.53778993586 86.75 2 -1.3075366281491692 0.3896773103564791 1.0 ['XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 26759 5066 FKEHHWKKFF True PC9_epitope_Rep3 1432.7404252193999 1432.73878490379 24.572 3 -1.307552251508658 0.3896773103564791 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000526038.1_1_9:100132196-100133123:+|nuORF'] 126293 21523 VLIAGLPE True H1975_Epitope_Rep2 810.48510497018 810.48400993586 89.047 2 -1.3075890782329826 0.3896773103564791 1.0 ['ENST00000372059.6_1_X:109459854-109561030:-|nuORF'] 58370 6560 LENLELTYGYL True H1975_Epitope_Rep1 1326.67073346338 1326.66962993586 30.29 2 -1.307633889536762 0.3896773103564791 1.0 ['ENSG00000279169|ENST00000625019|PRAMEF13', 'ENSG00000204481|ENST00000334600|PRAMEF14', 'ENSG00000116721|ENST00000332296|PRAMEF1'] 16313 5645 EEGISDLF True PC9_epitope_Rep2 908.4127278755599 908.41162993586 27.097 2 -1.3076961107095957 0.3896773103564791 1.0 ['nc|ENSG00000112242|O00716-2|E2F3', 'ENSG00000112242|ENST00000346618|E2F3'] 136727 9866 WYFVFVFRRRC True NCI_RA007_Epitope_Rep2 1577.8077935865697 1577.80668993586 43.002 2 -1.3077852010775468 0.38969674297368073 1.0 ['ENST00000507721.5_1_4:83346026-83346083:-|nuORF'] 6036 12117 APLAPQCNE True NCI_RA007_Epitope_Rep2 941.42766674705 941.42711496793 51.727 1 -1.3078025703774894 0.3897020670680938 1.0 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 58775 12804 LESGDGNNNQH True H1975_Epitope_Rep3 1183.48539230519 1183.48428993586 54.467 2 -1.307875259503962 0.3897020670680938 1.0 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210'] 127449 10066 VNIPVLKVRKE True NCI_RA007_Epitope_Rep4 1293.8132558064901 1293.81160490379 45.564 3 -1.3078830310619463 0.3897020670680938 1.0 ['ENSG00000126814|ENST00000261249|TRMT5'] 126321 12139 VLIHCCQV True PC9_epitope_Rep1 913.4513793970899 913.45028993586 51.554 2 -1.3079100933459586 0.3897020670680938 1.0 ['nc|ENSG00000163235|P01135-2|TGFA', 'ENSG00000163235|ENST00000295400|TGFA', 'nc|ENSG00000163235|P01135-3|TGFA', 'nc|ENSG00000163235|P01135-5|TGFA', 'nc|ENSG00000163235|P01135-4|TGFA'] 15712 11189 EAWMFYKHTR True NCI_RA007_Epitope_Rep3 1367.6444762292297 1367.6433699358602 51.12 2 -1.3079674625986204 0.38970472892256824 1.0 ['ENSG00000104783|ENST00000648319|KCNN4'] 11251 7892 DEETQYQTAVE True H1975_Epitope_Rep1 1311.5466551490701 1311.5455499358602 35.308 2 -1.308017254458307 0.38970472892256824 1.0 ['ENSG00000134758|ENST00000261593|RNF138', 'nc|ENSG00000134758|Q8WVD3-2|RNF138'] 46452 6429 ISTIFKSLWQ True NCI_RA007_Epitope_Rep2 1221.6757592741699 1221.67411490379 29.614 3 -1.3080734806603282 0.38970739064856713 1.0 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B'] 91168 2060 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 10.832 3 -1.308090291993457 0.38970739064856713 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 110555 25694 TFPVKGLK True PC9_epitope_Rep5 888.5432885526399 888.54218993586 104.19 2 -1.3081055853388504 0.3897147545730972 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 136476 25679 WVLSLALK True NCI_RA007_Epitope_Rep5 928.57458868092 928.57404496793 106.31 1 -1.3081313525906575 0.3897221183199199 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-2|ZZEF1'] 69404 18061 LTWNSVKGK True PC9_epitope_Rep5 1031.5763795860698 1031.5752899358602 74.485 2 -1.308304232963113 0.3897609768457631 1.0 ['nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 31274 16797 GDGFDSQSF True PC9_epitope_Rep2 958.3668403123 958.36629496793 69.857 1 -1.3083355488947335 0.3897609768457631 1.0 ['nc|nan|Q3C1V1-2|C11orf91'] 42416 20917 IEDLRAQIL True PC9_epitope_Rep2 1069.6131590176099 1069.61206993586 85.903 2 -1.3084048269291297 0.38976833976833974 1.0 ['CON__H-INV:HIT000015463'] 12905 6612 DLKEVPRKNIN True NCI_RA007_Epitope_Rep3 1324.7462984454796 1324.7452099358602 33.066 2 -1.3084267578996644 0.3897757025132419 1.0 ['ALK|p.T1117N|1|0.13|ENSG00000171094|chr2:29223351-29223351|G/T|missense_variant'] 113168 11568 TLPQYMNLLI True PC9_epitope_Rep4 1204.65258130144 1204.6509449037899 52.256 3 -1.3084705514457418 0.3897951304263893 1.0 ['ENST00000369044.1_1_6:107100238-107100431:+|nuORF'] 127544 25446 VNRGPKRPKVL True PC9_epitope_Rep1 1262.7935234214199 1262.7924299358601 102.86 2 -1.3086104939469632 0.38979778968196516 1.0 ['ENSG00000178234|ENST00000430044|GALNT11', 'ENST00000491061.1_1_7:151805139-151814490:+|nuORF'] 10328 21346 CEKPLPLK True PC9_epitope_Rep6 926.5259242363398 926.52482993586 94.981 2 -1.3086254778754094 0.38979778968196516 1.0 ['nc|ENSG00000170802|P32314-2|FOXN2', 'ENSG00000170802|ENST00000340553|FOXN2'] 15020 8271 DYLCISFEY True H1975_Epitope_Rep1 1151.48451291683 1151.4834099358602 36.748 2 -1.3086613640545877 0.3898125135728591 1.0 ['ENSG00000148925|ENST00000278174|BTBD10', 'nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENST00000525661.5_1_11:13427176-13461653:-|nuORF', 'ENST00000525864.5_1_11:13427176-13484721:-|nuORF'] 39222 13095 HIHRRELFFEM True H1975_Epitope_Rep3 1513.7612373169698 1513.76012993586 55.614 2 -1.308664100461154 0.3898125135728591 1.0 ['ENST00000353383.5_2_17:17707080-17712749:+|nuORF'] 60146 9526 LGNFFACLP True PC9_epitope_Rep5 980.4789740439198 980.47786993586 41.6 2 -1.3086941081749697 0.38981517228066787 1.0 ['nc|ENSG00000184863|Q96EV2-2|RBM33'] 61695 18238 LKWDRKKKRFV True PC9_epitope_Rep6 1502.9197865636997 1502.91814490379 82.794 3 -1.308705289111855 0.38981517228066787 1.0 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54'] 87042 19528 QNEDLRENML True PC9_epitope_Rep1 1260.57685016188 1260.5757499358601 79.936 2 -1.308774959116439 0.38982253374995474 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1'] 117346 7315 TVPCPRCL True PC9_epitope_Rep5 887.4357293329499 887.43462993586 33.098 2 -1.3088649815738387 0.3898298950416214 1.0 ['ENST00000537834.5_1_19:40771213-40785028:-|nuORF', 'ENST00000452077.5_2_19:40771216-40790860:-|nuORF'] 100383 19623 SKTSGKAK True PC9_epitope_Rep6 805.4657665079299 805.46466993586 88.139 2 -1.3088738282944326 0.3898372561556743 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 106462 22264 STKGLSTLEM True PC9_epitope_Rep2 1065.53761111885 1065.53650993586 91.118 2 -1.3088863883804092 0.38983991410613683 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 136023 15197 WRCFQWWRMDW True NCI_RA007_Epitope_Rep1 1698.7336426701397 1698.73254993586 63.184 2 -1.3089761363021999 0.38983991410613683 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 128598 12821 VPTRRPPA True PC9_epitope_Rep2 892.5242844435598 892.52318993586 54.617 2 -1.3090247882262818 0.38984727483291914 1.0 ['CLEC14A|p.P315Rfs*26|1|0.14|ENSG00000176435|chr14:38255079-38255079|G/-|frameshift_variant', 'CLEC14A|p.P441Rfs*24|1|0.17|ENSG00000176435|chr14:38254703-38254703|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 93989 24683 RRKKKRKKLCQ True H1975_Epitope_Rep1 1470.94053909162 1470.93889490379 102.26 3 -1.309095791611268 0.3898546353821099 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A'] 15631 18856 EASLRFEHRDL True PC9_epitope_Rep6 1371.68951184535 1371.6884099358601 85.177 2 -1.3091570298261783 0.38986935594774236 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 120448 2707 VEEQVLDK True NCI_RA007_Epitope_Rep2 958.4971262058599 958.49602993586 14.756 2 -1.3091660705808137 0.38986935594774236 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2', 'EPB41L2|p.E116K|1|0.27|ENSG00000079819|chr6:130956140-130956140|C/T|missense_variant'] 52380 24207 KKLKTLKKKL True PC9_epitope_Rep1 1226.8802131675 1226.87910993586 97.927 2 -1.3092307500755336 0.38987201293139845 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|14|1|sense'] 8345 18150 ATKYSHEEKG True PC9_epitope_Rep1 1148.5462016566 1148.5451099358602 74.604 2 -1.30924240383716 0.38987201293139845 1.0 ['ENST00000414239.5_1_X:55744191-55748632:+|nuORF'] 64444 2378 LPPEVQTRSPW True PC9_epitope_Rep5 1308.68263555976 1308.68098490379 13.181 3 -1.309275654314001 0.38987854739305056 1.0 ['ENST00000368902.1_1_1:151139872-151140700:+|nuORF'] 83875 4438 PVPFSQLGNP True H1975_Epitope_Rep1 1054.54474510462 1054.54364993586 22.082 2 -1.3092818642339856 0.38987854739305056 1.0 ['SMARCC1|p.S691L|1|0.4|ENSG00000173473|chr3:47662420-47662420|G/A|missense_variant'] 62036 19080 LLDRRVRSLP True NCI_RA007_Epitope_Rep4 1223.74623887583 1223.7451499358601 82.54 2 -1.3093236303203961 0.38987854739305056 1.0 ['ENST00000366254.2_1_3:172468880-172469961:+|nuORF'] 116450 16107 TTLCPWRTAF True NCI_RA007_Epitope_Rep5 1194.5855643707798 1194.58390490379 68.683 3 -1.309390448056862 0.38987854739305056 1.0 ['ENST00000557781.5_1_12:57498245-57498961:-|nuORF'] 105275 19685 SRLKQPLQVR True H1975_Epitope_Rep1 1223.74623887583 1223.7451499358601 81.943 2 -1.309419387097544 0.38987854739305056 1.0 ['ENST00000475971.5_1_7:892397-892598:+|nuORF'] 63628 16863 LMKLLPPPI True NCI_RA007_Epitope_Rep3 1020.6405600657599 1020.63946993586 74.203 2 -1.3094644315373882 0.38987854739305056 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 37924 11794 GYSGSKPDVI True NCI_RA007_Epitope_Rep1 1021.5080252427299 1021.5074749679301 49.854 1 -1.3094773120588703 0.38987854739305056 1.0 ['ENSG00000171817|ENST00000316433|ZNF540'] 14042 5278 DRLRRMREWWV True NCI_RA007_Epitope_Rep5 1601.8361335927298 1601.83447490379 26.997 3 -1.3094996794855969 0.38987854739305056 1.0 ['ENSG00000106484|ENST00000223215|MEST'] 57528 3177 LEDPNRCYYK True NCI_RA007_Epitope_Rep2 1299.59177195003 1299.5906699358602 17.002 2 -1.3095237020017956 0.38987854739305056 1.0 ['PHKB|p.A639Qfs*7|1|0.4|ENSG00000102893|chr16:47650864-47650864|G/-|frameshift_variant', 'nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 72343 22298 MIQRIFLITLD True PC9_epitope_Rep6 1361.77409341645 1361.77298993586 98.74 2 -1.3095278372371806 0.38987854739305056 1.0 ['ENSG00000110344|ENST00000252108|UBE4A', 'nc|ENSG00000110344|Q14139-2|UBE4A'] 9572 7138 AWQRHNKK True PC9_epitope_Rep5 1066.57844527474 1066.5773499358602 32.426 2 -1.3095755027206804 0.38987854739305056 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|34|1|sense'] 106341 8007 STGYDPVKL True H1975_Epitope_Rep3 978.5022115862998 978.5016649679301 35.77 1 -1.3095768539390575 0.38987854739305056 1.0 ['ENSG00000126261|ENST00000246548|UBA2', 'nc|ENSG00000126261|Q9UBT2-2|UBA2'] 102294 9399 SLSMFYLLR True PC9_epitope_Rep1 1128.6001518057599 1128.5990499358602 41.013 2 -1.3096105396503608 0.38987854739305056 1.0 ['ENSG00000256188|ENST00000539585|TAS2R30'] 101987 17349 SLQLLGFFK True H1975_Epitope_Rep3 1051.6066170851898 1051.60607496793 72.386 1 -1.309621440670219 0.38987854739305056 1.0 ['ENST00000531791.1_1_11:65146834-65147158:-|nuORF'] 58846 16915 LESTPPPHVM True PC9_epitope_Rep2 1106.5430308524599 1106.54192993586 70.308 2 -1.3096455869391526 0.38988590587838 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'CON__Q9TRI1'] 67176 18949 LSRACPCPQV True PC9_epitope_Rep5 1072.5157705588 1072.5146699358602 77.911 2 -1.309736786646695 0.389891217829663 1.0 ['ENST00000547687.1_1_16:89712476-89713182:-|nuORF'] 16703 10390 EERSGWEL True PC9_epitope_Rep6 1004.4563240230399 1004.45522993586 50.699 2 -1.3097485657737662 0.389891217829663 1.0 ['ENST00000563969.5_1_16:67312069-67312180:+|nuORF'] 72137 16255 MFSEKDEFE True H1975_Epitope_Rep2 1160.4695911286797 1160.4679349037901 67.734 3 -1.309779981077513 0.389891217829663 1.0 ['ENSG00000135960|ENST00000258443|EDAR', 'nc|ENSG00000135960|Q9UNE0-2|EDAR'] 69991 13130 LVLTHGADP True PC9_epitope_Rep2 921.4919812557699 921.49088993586 55.777 2 -1.309792537427425 0.389891217829663 1.0 ['ENSG00000154237|ENST00000388948|LRRK1', 'nc|ENSG00000154237|Q38SD2-2|LRRK1'] 58913 10638 LETGSREVV True PC9_epitope_Rep1 988.5189242795999 988.51782993586 45.811 2 -1.309886893084895 0.389901231292435 1.0 ['nc|ENSG00000158104|P32754-2|HPD', 'nc|ENSG00000158104|P32754|HPD', 'ENSG00000158104|ENST00000289004|HPD'] 83801 11393 PVLFYTFF True PC9_epitope_Rep5 1032.5320551625998 1032.53094993586 48.821 2 -1.309925805216251 0.389901231292435 1.0 ['nc|ENSG00000137707|Q9NY30-2|BTG4'] 83750 22 PVHPLLKRVP True NCI_RA007_Epitope_Rep2 1154.72879790654 1154.72716490379 0.10619 3 -1.3099875932455924 0.389901231292435 1.0 ['ENST00000514191.5_1_14:73404686-73407184:+|nuORF'] 69166 22603 LTRWREALHFP True PC9_epitope_Rep5 1424.7677025963999 1424.76660993586 91.941 2 -1.3100062992661692 0.3899138991389914 1.0 ['ENST00000549651.1_1_12:70636851-70637091:-|nuORF'] 81005 20496 PIKTRLAI True PC9_epitope_Rep3 910.5963867546599 910.59528993586 84.097 2 -1.3100542746237254 0.3899138991389914 1.0 ['ENST00000477342.1_1_7:92116773-92118803:-|nuORF', 'nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 6454 17032 APSFAPSSSV True PC9_epitope_Rep3 948.45526139388 948.45471496793 70.669 1 -1.3100694631774472 0.3899138991389914 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 10854 21929 CVIAAVKIFPR True PC9_epitope_Rep3 1215.71618461751 1215.7145249037899 89.65 3 -1.3101337580470496 0.3899138991389914 1.0 ['ENSG00000160886|ENST00000292430|LY6K'] 107880 24341 SVVLIPFEDV True PC9_epitope_Rep5 1116.60667665484 1116.60556993586 98.663 2 -1.3101393359974924 0.3899138991389914 1.0 ['ENST00000593682.1_1_19:12690915-12691281:-|nuORF'] 38410 7413 HENCKHTRL True PC9_epitope_Rep4 1136.5509101975601 1136.5492649037901 35.862 3 -1.3102330882878843 0.3899406714258152 1.0 ['ZNF142|p.P927Hfs*90|1|0.16|ENSG00000115568|chr2:218643736-218643736|G/-|frameshift_variant', 'ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 74031 9087 NDISHRLR True NCI_RA007_Epitope_Rep1 1009.5417254128499 1009.54062993586 39.347 2 -1.3102366286514286 0.3899406714258152 1.0 ['ENSG00000187135|ENST00000335523|VSTM2B'] 90338 5814 REFERNFYFEE True NCI_RA007_Epitope_Rep1 1564.6946567954399 1564.69300490379 26.669 3 -1.310312519494249 0.39000832037043737 1.0 ['ENST00000257290.9_1_4:55095294-55095372:+|nuORF'] 3368 20135 AGHCSGGS True H1975_Epitope_Rep2 674.24422308182 674.24367496793 83.439 1 -1.3103731103843825 0.39001362545669394 1.0 ['ENST00000529239.1_1_8:61851661-61851937:-|nuORF'] 12845 6356 DLGREQGETSK True NCI_RA007_Epitope_Rep1 1218.5840437173 1218.5829499358601 28.75 2 -1.31038051553945 0.39001362545669394 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 100011 6819 SIQFERAL True PC9_epitope_Rep2 962.5185303567798 962.51742993586 31.634 2 -1.3103837439506727 0.39001362545669394 1.0 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 46598 9807 ITCTVVDFC[Carbamidomethyl]K True H1975_Epitope_Rep2 1184.5569669438698 1184.55586993586 42.709 2 -1.31039238864427 0.39001362545669394 1.0 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.Q2088K|1|0.34|ENSG00000136011|chr12:103748980-103748980|C/A|missense_variant'] 141712 16862 YTVHHIVWN True PC9_epitope_Rep6 1167.5825275956697 1167.5814299358601 77.378 2 -1.3104651937781464 0.3900215821266232 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4'] 63367 11413 LLTYWLMKFMF True NCI_RA007_Epitope_Rep2 1491.7658372318695 1491.76472993586 48.984 2 -1.3104672426922936 0.3900215821266232 1.0 ['PON2|p.S228Yfs*26|1|0.25|ENSG00000105854|chr7:95409913-95409913|G/-|frameshift_variant'] 126757 26967 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 109.86 3 -1.310476901161814 0.3900215821266232 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 73964 3869 NCPSFALH True PC9_epitope_Rep1 887.3959726959499 887.39486993586 19.79 2 -1.3105088802709808 0.3900215821266232 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 9383 12282 AVSPANLPAV True PC9_epitope_Rep1 937.5232813840499 937.52218993586 52.096 2 -1.3105116685846208 0.3900215821266232 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 124282 6866 VGTLSLRP True NCI_RA007_Epitope_Rep5 841.50215201665 841.50160496793 33.092 1 -1.3105211909457315 0.3900215821266232 1.0 ['ENST00000565677.5_1_16:730312-731203:+|nuORF'] 109004 7837 TAHATRERI True PC9_epitope_Rep3 1053.56794016069 1053.56684993586 35.134 2 -1.310545057768663 0.39002688593371354 1.0 ['ENSG00000171786|ENST00000302101|NHLH1'] 86317 12823 QITTVDLYYLE True H1975_Epitope_Rep1 1356.68129814708 1356.6802099358601 54.389 2 -1.3105771977291085 0.39002688593371354 1.0 ['ENST00000507780.1_1_4:81256922-81257812:+|nuORF', 'ENST00000503883.1_1_4:81256940-81504361:+|nuORF', 'ENST00000502497.5_1_4:81256922-81711597:+|nuORF', 'nc|ENSG00000197826|Q6V702-3|CFAP299', 'ENST00000512931.5_1_4:81256922-81570142:+|nuORF', 'ENSG00000197826|ENST00000358105|CFAP299', 'nc|ENSG00000197826|Q6V702-1|CFAP299'] 112332 12496 TLADEDDREI True PC9_epitope_Rep1 1175.53061116211 1175.52950993586 52.934 2 -1.3106372296396223 0.39002688593371354 1.0 ['ENST00000557184.1_1_14:54976944-54997777:+|nuORF', 'ENSG00000100532|ENST00000216420|CGRRF1', 'ENST00000556216.5_1_14:54997446-55005098:+|nuORF'] 16953 19214 EFSISSNIIQF True PC9_epitope_Rep5 1283.63976768827 1283.6386699358602 78.946 2 -1.310647069768823 0.39002688593371354 1.0 ['ENSG00000180332|ENST00000379108|KCTD4'] 48609 26583 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 109.47 3 -1.310776416024064 0.39006570619084935 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 119580 22264 VATISPRR True PC9_epitope_Rep5 898.53484912726 898.53374993586 90.645 2 -1.3107826630835573 0.39006570619084935 1.0 ['ENSG00000146216|ENST00000259750|TTBK1'] 125711 23394 VKRGSGVG True NCI_RA007_Epitope_Rep5 758.4398861132598 758.43878993586 97.279 2 -1.3108338367998942 0.3900971716538471 1.0 ['ENST00000425081.2_1_17:1420280-1421117:+|nuORF'] 3128 6838 AGAQHHQLN True PC9_epitope_Rep4 974.4682261194199 974.46712993586 33.524 2 -1.310877614447615 0.39010452457593403 1.0 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 17574 4925 EHHLDKPYDV True NCI_RA007_Epitope_Rep2 1251.58840082175 1251.58730993586 23.778 2 -1.310958192230584 0.3901077705716421 1.0 ['ENSG00000104611|ENST00000265807|SH2D4A', 'nc|ENSG00000104611|Q9H788-2|SH2D4A'] 30588 12983 GAINIRLCSVP True PC9_epitope_Rep3 1141.62776353593 1141.62666993586 54.966 2 -1.3109769334245367 0.3901077705716421 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 94469 24108 RRRRRLWLK True PC9_epitope_Rep4 1338.8585237198197 1338.85687490379 101.23 3 -1.3109954686780074 0.3901077705716421 1.0 ['ENST00000606621.1_1_6:85472779-85472989:-|nuORF'] 46094 6140 ISHKHNVP True PC9_epitope_Rep2 930.50354899898 930.50244993586 29.011 2 -1.3110082828140381 0.3901077705716421 1.0 ['ENSG00000100109|ENST00000407690|TFIP11'] 119834 8497 VDDFRLKYENE True H1975_Epitope_Rep3 1426.6728587216996 1426.67176993586 37.669 2 -1.3110316536577051 0.3901077705716421 1.0 ['CON__P13646-1'] 121120 2875 VERNTDLPP True H1975_Epitope_Rep1 1039.52982331647 1039.5287299358602 14.661 2 -1.3110439065860746 0.3901077705716421 1.0 ['DGKI|p.P508T|1|0.35|ENSG00000157680|chr7:137585250-137585250|G/T|missense_variant'] 81083 22547 PITGRALEPYI True PC9_epitope_Rep2 1228.6815729306 1228.6804699358602 92.219 2 -1.3110754734001135 0.3901077705716421 1.0 ['ENSG00000169031|ENST00000396578|COL4A3', 'nc|ENSG00000169031|Q01955-2|COL4A3'] 112927 17514 TLLHHFRP True PC9_epitope_Rep1 1019.56648360871 1019.56538993586 72.161 2 -1.3111028508896136 0.39011041998167706 1.0 ['ENSG00000101276|ENST00000645534|SLC52A3', 'nc|ENSG00000101276|Q9NQ40-2|SLC52A3'] 125661 25715 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.54726993586 106.46 2 -1.3111336340855015 0.39011041998167706 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 86899 5894 QLSDLRVHQR True NCI_RA007_Epitope_Rep2 1250.68436689526 1250.6832699358602 27.542 2 -1.3111924056496984 0.3901204209308213 1.0 ['nc|ENSG00000267908|P0CG00|ZSCAN5DP'] 106871 17070 SVDCGPSRAD True PC9_epitope_Rep4 1005.41855861533 1005.41746993586 73.658 2 -1.311206911954494 0.3901204209308213 1.0 ['ENSG00000178974|ENST00000313833|FBXO34', 'FBXO34|p.L485Cfs*13|1|0.18|ENSG00000178974|chr14:55351837-55351837|T/-|frameshift_variant'] 15717 6563 EAYASDRHR True NCI_RA007_Epitope_Rep2 1103.5108192073899 1103.5097299358602 30.141 2 -1.3112128734214037 0.3901204209308213 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 59675 22806 LGALPEMLLP True PC9_epitope_Rep1 1052.59400379616 1052.59347496793 92.536 1 -1.3113057283764622 0.3901639344262295 1.0 ['ENST00000534667.1_1_11:64880702-64881078:+|nuORF', 'ENST00000531029.5_1_11:64880120-64882285:+|nuORF', 'ENST00000527851.5_1_11:64880615-64881038:+|nuORF', 'ENST00000533766.5_1_11:64880615-64882334:+|nuORF', 'nc|ENSG00000149809|O76062-2|TM7SF2', 'ENST00000529601.5_1_11:64879444-64883522:+|nuORF', 'ENSG00000149809|ENST00000279263|TM7SF2', 'ENST00000530650.5_1_11:64879967-64883522:+|nuORF'] 106888 5312 SVDGSPVSP True H1975_Epitope_Rep2 843.39741216459 843.39686496793 25.484 1 -1.3113428032681425 0.3901665822906873 1.0 ['ENSG00000169047|ENST00000305123|IRS1'] 16445 8760 EELDRFLLQKQ True NCI_RA007_Epitope_Rep1 1417.7565287760096 1417.75489490379 38.076 3 -1.3113499802370725 0.3901665822906873 1.0 ['nc|ENSG00000104679|Q9Y3T6-3|R3HCC1', 'ENSG00000104679|ENST00000265806|R3HCC1'] 129941 10778 VRVFRDSPNS True NCI_RA007_Epitope_Rep4 1175.60471959223 1175.60362993586 48.306 2 -1.3114680740042803 0.39017393295806563 1.0 ['ENST00000513207.2_1_11:78140762-78140879:-|nuORF'] 32372 14167 GFKNSRIIFR True H1975_Epitope_Rep1 1236.7091250911199 1236.7080299358602 59.668 2 -1.3115463209032077 0.390217443710525 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|164|3|sense'] 88406 18350 QSM[Oxidation]TERQAL True PC9_epitope_Rep1 1078.50770835334 1078.50660993586 75.372 2 -1.311745407517163 0.39024948776666263 1.0 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000480468.1_1_11:116728475-116732017:-|nuORF', 'nc|ENSG00000160584|Q9Y2K2-6|SIK3'] 19896 17988 ELTRICDDL True PC9_epitope_Rep5 1076.51721002744 1076.5161099358602 74.207 2 -1.3117741817125457 0.39024948776666263 1.0 ['ENSG00000013810|ENST00000313288|TACC3'] 100841 21089 SLENKELCI True PC9_epitope_Rep5 1047.52704643515 1047.5259499358601 86.181 2 -1.3118078358647602 0.39024948776666263 1.0 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2', 'DNA2|p.G653Vfs*4|1|0.1|ENSG00000138346|chr10:68431869-68431887|CATATCGTAGTTGTTTTTC/-|frameshift_variant', 'nc|ENSG00000138346|P51530-2|DNA2'] 109420 16065 TDESEEDGEEK True NCI_RA007_Epitope_Rep5 1266.4735497784598 1266.47191490379 68.524 3 -1.3118091240600824 0.39024948776666263 1.0 ['nc|ENSG00000092853|Q9HAW4-2|CLSPN', 'nc|ENSG00000092853|Q9HAW4-3|CLSPN', 'ENSG00000092853|ENST00000318121|CLSPN'] 129974 18492 VRVRGSGV True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 77.955 2 -1.3118103933426914 0.39024948776666263 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 112653 9698 TLFNNESLV True PC9_epitope_Rep2 1035.5236753068698 1035.52256993586 42.643 2 -1.3118235850021678 0.39024948776666263 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'ATAD5|p.N1157Pfs*17|1|0.06|ENSG00000176208|chr17:30869507-30869508|-/CCTTT|frameshift_variant', 'nc|ENSG00000176208|Q96QE3-2|ATAD5', 'ATAD5|p.K970Nfs*32|1|0.2|ENSG00000176208|chr17:30858271-30858271|A/-|frameshift_variant'] 127768 8828 VPDDFENR True H1975_Epitope_Rep1 990.4406739589 990.43956993586 38.879 2 -1.311853006156499 0.3902809415337889 1.0 ['POLR3A|p.G812D|1|0.66|ENSG00000148606|chr10:78001019-78001019|C/T|missense_variant'] 126386 1744 VLKKKKKKKK True NCI_RA007_Epitope_Rep2 1254.92274668582 1254.9211049037901 9.4961 3 -1.311946305780522 0.3902835862268449 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 137362 7211 YDQSQPPYYN True H1975_Epitope_Rep3 1273.5251318588498 1273.5240299358602 32.71 2 -1.3119537591276502 0.3902835862268449 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 12599 7602 DLAEKNVAS True PC9_epitope_Rep6 945.47672511445 945.47562993586 38.524 2 -1.3120363822078482 0.3903029864776918 1.0 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 5589 12108 ANIGPLLV True PC9_epitope_Rep5 795.48543932335 795.48434993586 51.564 2 -1.31209845873632 0.39031562202484965 1.0 ['ENSG00000101276|ENST00000645534|SLC52A3', 'nc|ENSG00000101276|Q9NQ40-2|SLC52A3'] 69133 8348 LTRLQTYRF True NCI_RA007_Epitope_Rep4 1196.6665915727997 1196.66494490379 38.925 3 -1.3121067198111709 0.39031562202484965 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 656 6175 AATGACRC True PC9_epitope_Rep3 751.31052881983 751.30942993586 28.794 2 -1.3121347136222685 0.39031562202484965 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 19153 10748 ELHHIVSHPVK True NCI_RA007_Epitope_Rep1 1294.71460439438 1294.7135099358602 45.8 2 -1.3122219796176595 0.39031562202484965 1.0 ['ENST00000569028.2_1_16:34714672-34714819:-|nuORF'] 88476 22578 QSSVVRCRPLT True PC9_epitope_Rep4 1244.6659399497998 1244.66484993586 95.08 2 -1.312289107403793 0.39031562202484965 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 98319 22691 SEVTPFPG True PC9_epitope_Rep2 832.3966838885999 832.39558993586 92.775 2 -1.3123613267232264 0.3903350204868643 1.0 ['nc|ENSG00000091140|P09622-2|DLD', 'ENSG00000091140|ENST00000205402|DLD', 'ENST00000451081.5_1_7:107545401-107546727:+|nuORF', 'ENST00000478414.1_1_7:107543952-107546123:+|nuORF'] 23507 10016 EVVGREPPPVP True NCI_RA007_Epitope_Rep5 1174.6346227381798 1174.63352993586 45.168 2 -1.3123968304761555 0.39033824574933423 1.0 ['ENSG00000144583|ENST00000273067|MARCHF4'] 56965 9504 LDQWMFGKV True PC9_epitope_Rep2 1122.55320161334 1122.5515649037902 41.901 3 -1.3124080678863788 0.39033824574933423 1.0 ['NPY5R|p.R362Efs*19|1|0.28|ENSG00000164129|chr4:163351349-163351350|-/A|frameshift_variant', 'ENSG00000164129|ENST00000338566|NPY5R'] 15217 5440 EADVFAGSIQP True H1975_Epitope_Rep3 1132.540053647 1132.53894993586 25.984 2 -1.3124520050765618 0.39033824574933423 1.0 ['ENSG00000074276|ENST00000261944|CDHR2'] 108721 8214 SYREPKHPL True PC9_epitope_Rep4 1125.5930922793698 1125.59143490379 39.054 3 -1.3124713561332202 0.39033824574933423 1.0 ['ENSG00000072071|ENST00000361434|ADGRL1', 'nc|ENSG00000072071|O94910|ADGRL1'] 32020 6195 GEQPHCRDVDE True NCI_RA007_Epitope_Rep4 1283.52006356175 1283.51896993586 30.438 2 -1.312618356617538 0.39033824574933423 1.0 ['nc|ENSG00000144152|Q53RD9-4|FBLN7'] 110546 17180 TFPGKSTF True PC9_epitope_Rep1 883.44396843419 883.44286993586 70.904 2 -1.3126412421661715 0.39033824574933423 1.0 ['ENST00000309052.8_1_2:30862994-30863111:+|nuORF'] 79621 14552 PDLSVEVNI True PC9_epitope_Rep1 984.51277627 984.51166993586 60.798 2 -1.3127077509988847 0.39033824574933423 1.0 ['nc|ENSG00000112139|Q8NFP4-2|MDGA1', 'ENSG00000112139|ENST00000434837|MDGA1', 'ENST00000478143.2_1_6:37617732-37622777:-|nuORF'] 138009 9381 YFTLLRHLLNY True H1975_Epitope_Rep1 1451.7925203619097 1451.7914299358602 40.993 2 -1.3127342963316735 0.3903529383412259 1.0 ['nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'USP9Y|p.W2351Cfs*39|1|0.47|ENSG00000114374|chrY:12847315-12847315|G/-|frameshift_variant', 'ENSG00000114374|ENST00000338981|USP9Y', 'USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 34357 7172 GPEPLSHFE True PC9_epitope_Rep3 1011.46616043075 1011.46506993586 32.599 2 -1.312746359791061 0.3903529383412259 1.0 ['ENSG00000007047|ENST00000262891|MARK4'] 29217 5606 FTTPLTPS True NCI_RA007_Epitope_Rep1 862.44363408102 862.44252993586 25.87 2 -1.3129378778054013 0.3904205325942885 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 32519 10118 GGFLPCLHTCQ True H1975_Epitope_Rep3 1174.5263352425002 1174.52577496793 43.961 1 -1.3130241778703573 0.39042317331791015 1.0 ['ENST00000319080.7_12:122630330-122630822:+|nuORF'] 133764 23615 VYEMVIKSL True PC9_epitope_Rep3 1080.58891841572 1080.58782993586 96.121 2 -1.313043204715663 0.39042317331791015 1.0 ['ENST00000461041.1_1_9:15423144-15433670:+|nuORF'] 36164 16601 GVASEHMKRF True NCI_RA007_Epitope_Rep3 1160.5760623162398 1160.57496993586 73.083 2 -1.313262414778373 0.39047401016940986 1.0 ['LGALS4|p.G70Afs*37|1|0.63|ENSG00000171747|chr19:38808874-38808874|C/-|frameshift_variant', 'ENSG00000171747|ENST00000307751|LGALS4'] 104239 7458 SQHRDYRDRQA True NCI_RA007_Epitope_Rep2 1430.6763213927 1430.6752299358602 33.637 2 -1.3132658691278638 0.39047401016940986 1.0 ['ENST00000261745.8_1_12:112546638-112546719:-|nuORF'] 14857 7047 DVWVMMFVM True H1975_Epitope_Rep3 1156.5119310483199 1156.51082993586 32.072 2 -1.3133098911569316 0.3904960420256154 1.0 ['GRIN2B|p.A794Lfs*16|1|0.52|ENSG00000273079|chr12:13567243-13567243|C/-|frameshift_variant', 'ENSG00000273079|ENST00000609686|GRIN2B'] 101687 14825 SLMGTVMAKR True PC9_epitope_Rep1 1092.57837081536 1092.5772699358602 61.846 2 -1.3133179486618798 0.3904960420256154 1.0 ['ENSG00000164867|ENST00000297494|NOS3', 'nc|ENSG00000164867|P29474-3|NOS3', 'nc|ENSG00000164867|P29474-2|NOS3'] 72155 23500 MFVLHHLP True NCI_RA007_Epitope_Rep4 992.52659294268 992.52548993586 101.97 2 -1.313359961783899 0.3904960420256154 1.0 ['ENST00000343137.8_1_1:14107102-14107186:+|nuORF'] 60687 13617 LHNGLLAR True PC9_epitope_Rep3 892.52428444356 892.52318993586 57.441 2 -1.31339175763947 0.39050338562375 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 141148 5469 YSSSFAQHMR True PC9_epitope_Rep5 1212.53459142708 1212.5329349037902 26.047 3 -1.3134476392387016 0.39051072904492823 1.0 ['ENSG00000153896|ENST00000329285|ZNF599'] 113908 16238 TNRKRVLN True NCI_RA007_Epitope_Rep4 999.5937609857099 999.59266993586 70.419 2 -1.313463093954429 0.39051807228915664 1.0 ['ENSG00000197724|ENST00000359246|PHF2'] 16027 20819 EDTRKGKIS True PC9_epitope_Rep3 1032.55637241748 1032.55526993586 85.352 2 -1.3137112440503265 0.390573607546897 1.0 ['ENST00000444067.2_1_1:78313713-78313869:+|nuORF'] 16535 10837 EELPSPGTK True NCI_RA007_Epitope_Rep2 956.4814761417199 956.48092496793 46.758 1 -1.3137982205923007 0.39065323727139106 1.0 ['ENSG00000172244|ENST00000306862|C5orf34', 'ENST00000514462.1_1_5:43505848-43515051:-|nuORF'] 23455 12397 EVTLERMLVSK True H1975_Epitope_Rep1 1303.7169724631501 1303.7158699358602 52.718 2 -1.3138161964299553 0.39066057853330605 1.0 ['ENSG00000127928|ENST00000248572|GNGT1'] 16904 5737 EFLVIQVF True H1975_Epitope_Rep3 993.5535188831698 993.55242993586 27.097 2 -1.313883195707782 0.3906799672304949 1.0 ['ENST00000579124.5_1_18:20495424-20516752:+|nuORF'] 123342 8590 VGLSYEDW True H1975_Epitope_Rep3 967.4287122928699 967.42760993586 38.032 2 -1.3139202148139781 0.3906873079934944 1.0 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1'] 126590 13934 VLLWKRTWWCH True H1975_Epitope_Rep3 1526.7968945497 1526.79578993586 58.911 2 -1.3139615093641543 0.3906946485796208 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 30781 7199 GALTTQPESP True H1975_Epitope_Rep2 999.4872897981498 999.48618993586 32.625 2 -1.314033252458401 0.3907093292212799 1.0 ['nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 139665 14867 YMVVYLVI True PC9_epitope_Rep3 998.5510763550197 998.54996993586 62.323 2 -1.314042886806313 0.3907093292212799 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 23896 8101 EYKLLHEYW True NCI_RA007_Epitope_Rep2 1279.6237237013097 1279.62262993586 36.144 2 -1.3141995517067475 0.390752809936272 1.0 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'ENST00000433355.6_1_6:146231577-146267398:-|nuORF', 'ENST00000523276.1_1_6:146240471-146248402:-|nuORF', 'ENST00000519632.5_1_6:146239221-146248402:-|nuORF'] 11190 12619 DDVHWKENGTL True PC9_epitope_Rep6 1312.6047791618798 1312.60368993586 59.997 2 -1.3142200985737582 0.3907601493795928 1.0 ['ENSG00000102805|ENST00000377453|CLN5'] 24465 13189 FADQHVEIP True PC9_epitope_Rep4 1054.5083595959 1054.5072699358602 58.629 2 -1.3143133039928 0.3907795352423173 1.0 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'nc|ENSG00000164347|Q969S9-5|GFM2', 'nc|ENSG00000164347|Q969S9-4|GFM2'] 126745 25509 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 110.29 3 -1.3143820777614161 0.3907821666485972 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 60280 17999 LGRRQHSR True NCI_RA007_Epitope_Rep1 1008.5689432202 1008.56837496793 74.15 1 -1.314429006627941 0.3907821666485972 1.0 ['ENST00000412918.1_1_1:226844949-226862702:-|nuORF'] 98773 24459 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 100.62 3 -1.3145025754357047 0.39080155154552243 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 59380 17930 LFLILALEERA True NCI_RA007_Epitope_Rep1 1286.7598232512998 1286.7587299358602 73.881 2 -1.3145408740386084 0.3908209359754261 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF'] 21979 5766 ESESEHHPSPD True NCI_RA007_Epitope_Rep2 1249.48472359885 1249.48362993586 27.045 2 -1.3145497862833901 0.3908282740676496 1.0 ['SSMEM1|p.C201Lfs*36|1|0.24|ENSG00000165120|chr7:130216335-130216336|-/T|frameshift_variant', 'ENSG00000165120|ENST00000297819|SSMEM1'] 40448 3451 HRCAAGFH True PC9_epitope_Rep6 897.4027894118899 897.40168993586 19.452 2 -1.3145888367128584 0.3908356119830878 1.0 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 98825 8877 SGPPLKAG True PC9_epitope_Rep1 725.40718900265 725.4066449679301 38.984 1 -1.3146474473274363 0.39085554605350326 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF'] 68597 15625 LTHLQEKQLW True H1975_Epitope_Rep3 1294.70337100434 1294.7022699358602 65.518 2 -1.3146534946462416 0.39085554605350326 1.0 ['ENST00000375394.6_1_6:31929408-31929824:+|nuORF'] 66589 11509 LSIPRLDLGDP True NCI_RA007_Epitope_Rep1 1194.6608374860198 1194.6597499358602 48.733 2 -1.3146668291871302 0.39085554605350326 1.0 ['ENST00000588831.5_1_19:36428129-36428243:+|nuORF'] 122688 8449 VGGGGGGP True H1975_Epitope_Rep1 556.2605247689601 556.25997496793 37.427 1 -1.314710053438705 0.39085554605350326 1.0 ['ENSG00000134780|ENST00000257215|DAGLA'] 76606 8381 NQPELETRMST True H1975_Epitope_Rep3 1304.60306490972 1304.60196993586 37.221 2 -1.3147199150708588 0.39085554605350326 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1'] 126990 20019 VLRSWWPRWWW True H1975_Epitope_Rep1 1656.8466216234397 1656.8449649037902 83.312 3 -1.3147283984842175 0.39085554605350326 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 119841 15579 VDDVGKNI True PC9_epitope_Rep4 858.44469671018 858.44358993586 67.845 2 -1.3147901698884554 0.39085817524841915 1.0 ['CCDC73|p.D962N|1|0.38|ENSG00000186714|chr11:32613434-32613434|C/T|missense_variant'] 114879 25209 TQRIRKKRELR True PC9_epitope_Rep2 1482.9219118220196 1482.92080993586 102.63 2 -1.3148314918745025 0.39085817524841915 1.0 ['ENST00000324871.11_1_12:58164900-58164960:-|nuORF'] 33130 8088 GISKSTFY True NCI_RA007_Epitope_Rep2 901.4545331178899 901.45342993586 36.092 2 -1.3149753930781056 0.3908728485914221 1.0 ['nc|ENSG00000140993|Q6NT04-2|TIGD7', 'ENSG00000140993|ENST00000396862|TIGD7'] 113224 20397 TLQLYNSVK True PC9_epitope_Rep5 1064.5866099165999 1064.58550993586 83.494 2 -1.3149913073813326 0.3908728485914221 1.0 ['ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-2|IL12RB1', 'nc|ENSG00000096996|P42701-3|IL12RB1'] 65473 18544 LRKSERPRWTL True NCI_RA007_Epitope_Rep4 1440.8313654821197 1440.83026993586 80.239 2 -1.3150419299918308 0.39088018499783206 1.0 ['ENST00000204005.13_1_19:41111557-41112187:+|nuORF'] 59279 19790 LFGEKTCQF True PC9_epitope_Rep5 1071.5059170677498 1071.50480993586 81.167 2 -1.3151036690973998 0.3909116091967867 1.0 ['ENSG00000170542|ENST00000380698|SERPINB9'] 85047 7187 QEIEKEIHDIE True H1975_Epitope_Rep1 1381.6725243685298 1381.67142993586 32.664 2 -1.3151361182632375 0.3909189449596531 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'nc|ENSG00000189190|Q6ZNG1|ZNF600', 'ENSG00000189190|ENST00000692063|ZNF600'] 112127 8215 TIYDFWRMVWH True NCI_RA007_Epitope_Rep2 1552.72854020636 1552.72744993586 36.592 2 -1.3151864902324732 0.39092628054582024 1.0 ['nc|ENSG00000173482|P28827|PTPRM', 'ENSG00000173482|ENST00000580170|PTPRM', 'ENST00000577827.5_1_18:8296422-8376613:+|nuORF'] 19865 13997 ELTFDFPI True PC9_epitope_Rep1 980.4854988929999 980.48440993586 58.677 2 -1.3151978444299277 0.39092945398492257 1.0 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2'] 123170 13993 VGKYFWPRI True NCI_RA007_Epitope_Rep3 1164.6443995762397 1164.64330993586 62.35 2 -1.3152279305232448 0.39092945398492257 1.0 ['ENST00000511405.1_1_5:111575355-111600594:-|nuORF', 'ENSG00000129595|ENST00000261486|EPB41L4A'] 111610 15094 TIDKVVKI True PC9_epitope_Rep2 914.5800679841799 914.57896993586 63.317 2 -1.3152613072281214 0.39092945398492257 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ATR|p.V1555Efs*36|1|0.04|ENSG00000175054|chr3:142512421-142512448|ATGGTATGCTGATCGTCATGCTTTAGAA/-|frameshift_variant'] 67127 13620 LSQLQENLK True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 57.412 2 -1.3152670849693857 0.39092945398492257 1.0 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1'] 27944 6333 FQEGM[Oxidation]LEKHE True H1975_Epitope_Rep3 1262.5601378490198 1262.55904993586 29.35 2 -1.3153372511572445 0.39092945398492257 1.0 ['nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L', 'nc|ENSG00000144893|Q86YW9-2|MED12L', 'nc|ENSG00000144893|Q86YW9-3|MED12L'] 130276 10300 VSGMQSYK True PC9_epitope_Rep5 898.42185309062 898.42074993586 44.607 2 -1.3153894162516715 0.39092945398492257 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 57844 4647 LEEWCPHF True NCI_RA007_Epitope_Rep5 1059.4484021916298 1059.4473099358602 24.555 2 -1.3154090481875345 0.39092945398492257 1.0 ['ENST00000476883.5_1_1:153925810-153930559:-|nuORF'] 142793 13074 YYRRRHRHERT True H1975_Epitope_Rep1 1628.85087214008 1628.8497699358602 55.377 2 -1.3154414904019072 0.3909514577136595 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 12748 10791 DLEHLQLDFWR True NCI_RA007_Epitope_Rep1 1470.7255630009 1470.72446993586 45.969 2 -1.3154458462539913 0.3909514577136595 1.0 ['ENSG00000091704|ENST00000011292|CPA1'] 18800 11251 ELDGKREWREK True NCI_RA007_Epitope_Rep2 1444.7422756941999 1444.7411699358602 48.351 2 -1.3154896732519334 0.3909514577136595 1.0 ['ENST00000520239.1_1_8:70041855-70042335:+|nuORF'] 84176 7054 PYKKLTIFK True NCI_RA007_Epitope_Rep4 1136.6957664427598 1136.69413490379 33.757 3 -1.3155367117983392 0.3909692956050572 1.0 ['APOB|p.D4033Y|1|0.41|ENSG00000084674|chr2:21003325-21003325|C/A|missense_variant'] 82637 8210 PQKYYWWFFQT True NCI_RA007_Epitope_Rep2 1592.7452358163196 1592.7441299358602 36.572 2 -1.3155441693066674 0.3909692956050572 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 43026 22809 IETLSGKKR True PC9_epitope_Rep3 1030.61349337078 1030.6123899358602 93.005 2 -1.315557246446227 0.3909692956050572 1.0 ['chr10:5004014-5005970|127|116.13|0.0|23.47|-|2|TE_info:L1M4c,L1M4c_dup2264,L1,LINE,donor,+,5005970,5006355|AKR1C2,None|5'] 82314 15821 PPIMLIGH True NCI_RA007_Epitope_Rep3 876.4891448047999 876.48804993586 69.865 2 -1.3155998887941303 0.3909692956050572 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 18225 12823 EINLMICHLSW True H1975_Epitope_Rep1 1357.65226403161 1357.65116993586 54.389 2 -1.3156578925545148 0.3909692956050572 1.0 ['ENST00000470085.5_1_3:111846911-111847028:-|nuORF'] 64235 18590 LPGVGNII True PC9_epitope_Rep6 781.46978925921 781.46868993586 84.148 2 -1.3156682015796335 0.3909692956050572 1.0 ['NEIL3|p.F266Lfs*7|1|0.79|ENSG00000109674|chr4:177341569-177341569|T/-|frameshift_variant', 'ENSG00000109674|ENST00000264596|NEIL3', 'ENST00000513321.1_1_4:178231246-178274506:+|nuORF'] 124297 4278 VGTNPVMYV True PC9_epitope_Rep3 978.48445334718 978.48334993586 21.566 2 -1.3156915883263238 0.3909692956050572 1.0 ['ENST00000262198.8_1_18:77897135-77897174:+|nuORF'] 117746 11306 TVVGVDVL True PC9_epitope_Rep3 800.4643695256 800.46326993586 48.494 2 -1.3157896403478333 0.3909692956050572 1.0 ['ENST00000431957.1_1_7:126935711-126936140:+|nuORF'] 85461 20178 QFGVSFYSIFL True PC9_epitope_Rep3 1306.65977485686 1306.6586699358602 82.871 2 -1.315838351261245 0.3909692956050572 1.0 ['ENST00000559111.1_1_15:99798356-99798647:+|nuORF'] 70469 4587 LVVCRCSNP True PC9_epitope_Rep4 989.4786567740899 989.4781049679301 24.141 1 -1.3158997766535663 0.39097662881843687 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 84456 7286 QAHVQYKK True NCI_RA007_Epitope_Rep3 1000.5454138109599 1000.54430993586 35.77 2 -1.316222391035212 0.3910682463998459 1.0 ['nc|ENSG00000221994|Q2M218-2|ZNF630', 'ENSG00000221994|ENST00000276054|ZNF630'] 111993 8552 TIRLFQQQK True NCI_RA007_Epitope_Rep2 1160.6665915728001 1160.66548993586 37.908 2 -1.3162904286692318 0.3910996592537295 1.0 ['INHBA|p.S364Pfs*33|1|0.09|ENSG00000122641|chr7:41689842-41689842|C/-|frameshift_variant', 'INHBA|p.S389Ifs*17|1|0.31|ENSG00000122641|chr7:41689766-41689767|-/T|frameshift_variant', 'ENSG00000122641|ENST00000242208|INHBA', 'ENST00000464515.1_1_7:41729250-41730808:-|nuORF'] 114335 17347 TPRLRGGV True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 73.5 2 -1.3163433911394444 0.3911190309918848 1.0 ['ENST00000398665.7_1_19:2231997-2232204:+|nuORF'] 138994 23450 YKRLKVPPA True PC9_epitope_Rep6 1070.6600496403798 1070.6589499358602 103.31 2 -1.3163594026763217 0.3911263620492445 1.0 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENST00000485706.5_1_9:136216467-136216912:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 113222 20476 TLQLYNSVK True PC9_epitope_Rep1 1064.5866099165999 1064.58550993586 83.573 2 -1.3164514745929226 0.39115306355876084 1.0 ['ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-2|IL12RB1', 'nc|ENSG00000096996|P42701-3|IL12RB1'] 103058 4305 SPGAQYPPV True PC9_epitope_Rep6 914.4497820906198 914.44868993586 23.598 2 -1.316452930084215 0.39115306355876084 1.0 ['ENST00000358393.1_2_20:62669539-62670381:+|nuORF'] 11105 14396 DCYVDHVL True PC9_epitope_Rep1 962.4167677101799 962.41566993586 60.198 2 -1.3164864234815647 0.391160393941583 1.0 ['ENST00000610272.1_1_1:179850989-179851172:-|nuORF'] 14615 10443 DVAERVDL True PC9_epitope_Rep1 915.4661604307499 915.46506993586 45.056 2 -1.3165144283672712 0.39117976378237157 1.0 ['ENSG00000171241|ENST00000303383|SHCBP1'] 133029 24888 VVPIEVLPTV True NCI_RA007_Epitope_Rep1 1064.648147544 1064.64757496793 103.01 1 -1.316553894046229 0.3911860652678969 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 32425 5542 GFTGGHHTREG True H1975_Epitope_Rep3 1154.52171824426 1154.5206299358601 26.367 2 -1.316637763912267 0.3911860652678969 1.0 ['ENST00000547490.1_1_12:53700445-53700930:+|nuORF', 'ENSG00000139637|ENST00000267103|MYG1'] 99186 14204 SHKTKYTL True PC9_epitope_Rep3 976.53418042092 976.53308993586 59.722 2 -1.3167931837184121 0.3911860652678969 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|2.1672232902095696|0.3234029913481031|2.74|541.0|17|3|sense'] 29956 15815 FWGRFSAEL True PC9_epitope_Rep4 1111.5450794577898 1111.54398993586 68.757 2 -1.3168003967909716 0.3911860652678969 1.0 ['ENST00000433032.1_1_6:41701860-41701905:-|nuORF'] 83548 21871 PTWDLPRRL True NCI_RA007_Epitope_Rep3 1152.64037682496 1152.63874490379 95.014 3 -1.3168445180714607 0.3911860652678969 1.0 ['ENST00000290079.8_1_9:139687350-139687656:+|nuORF'] 100102 8079 SISIGELAL True H1975_Epitope_Rep3 901.51204799401 901.51094993586 36.05 2 -1.316857794625653 0.3911860652678969 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant'] 3540 4171 AGLRQQEQN True H1975_Epitope_Rep3 1042.5155702346597 1042.51446993586 21.161 2 -1.316911013380759 0.3911860652678969 1.0 ['ENSG00000248746|ENST00000513398|ACTN3'] 118560 9258 TYQRSEVIL True H1975_Epitope_Rep3 1107.59242357303 1107.5913299358601 40.603 2 -1.3169394500433267 0.3911860652678969 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 46306 7830 ISQGFDISQVL True H1975_Epitope_Rep1 1205.62920300457 1205.62810993586 35.068 2 -1.316947317197785 0.3911860652678969 1.0 ['nc|ENSG00000074803|Q13621-3|SLC12A1', 'ENSG00000074803|ENST00000380993|SLC12A1'] 133032 23525 VVPIEVLPTV True PC9_epitope_Rep6 1064.648147544 1064.64757496793 103.63 1 -1.3169483997954106 0.3911860652678969 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 127797 9833 VPEARQLAP True PC9_epitope_Rep3 979.5450794577899 979.5439899358599 42.781 2 -1.3169660192118882 0.3911860652678969 1.0 ['ENSG00000232399|ENST00000429667|USP17L13'] 123606 6838 VGQFSKREK True NCI_RA007_Epitope_Rep3 1077.5930922793698 1077.59198993586 34.01 2 -1.3169860458238798 0.3911860652678969 1.0 ['nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 61941 21974 LLDKCLREN True PC9_epitope_Rep1 1102.58047899034 1102.57938993586 89.344 2 -1.3169891477694526 0.3911860652678969 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 23049 6362 EVHKIKYVMLH True NCI_RA007_Epitope_Rep1 1395.76967674235 1395.76804490379 28.773 3 -1.317014151912322 0.3911860652678969 1.0 ['ENST00000496877.1_1_3:100630362-100630893:-|nuORF'] 100534 18535 SLAVPAKRRR True NCI_RA007_Epitope_Rep5 1152.7203584811598 1152.7192699358602 78.121 2 -1.3170526012124901 0.3911886849232621 1.0 ['nc|nan|Q8N9M1-3|C19orf47', 'nc|nan|Q8N9M1-2|C19orf47', 'ENSG00000160392|ENST00000683109|C19orf47', 'nc|nan|Q8N9M1|C19orf47'] 23058 7022 EVHWFSIMYSF True PC9_epitope_Rep2 1444.6485585501598 1444.64692490379 32.413 3 -1.3170582668173654 0.3911886849232621 1.0 ['ENST00000258439.7_1_2:96918849-96919380:-|nuORF'] 94541 24574 RRRSLEVAT True PC9_epitope_Rep4 1086.6257893899797 1086.62468993586 103.01 2 -1.3171647903112076 0.39120805045981993 1.0 ['ENST00000468255.5_1_6:31633906-31636470:+|nuORF', 'ENST00000481269.1_1_6:31633906-31636957:+|nuORF', 'ENST00000475875.1_1_6:31633906-31634962:+|nuORF', 'ENST00000465481.5_1_6:31633906-31635902:+|nuORF'] 63067 13790 LLQKEEKDREK True H1975_Epitope_Rep1 1414.7779924965796 1414.77688993586 58.186 2 -1.3171909010194114 0.3912085795789651 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 121912 14163 VFRPEQDPV True PC9_epitope_Rep4 1085.55055876105 1085.54946993586 62.383 2 -1.3172133388056155 0.3912085795789651 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 84007 13129 PVSVSRSEP True NCI_RA007_Epitope_Rep2 956.4927095317599 956.4921649679301 55.7 1 -1.3172474742908964 0.3912085795789651 1.0 ['ENSG00000213892|ENST00000587331|CEACAM16'] 126994 19900 VLRSWWPRWWW True H1975_Epitope_Rep3 1656.8466216234397 1656.8449649037902 83.303 3 -1.3172655795619659 0.3912085795789651 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 121359 20459 VEVKTLVE True PC9_epitope_Rep1 915.5276980581499 915.52660993586 83.507 2 -1.3172886330501972 0.3912085795789651 1.0 ['nc|ENSG00000164691|Q8N103-3|TAGAP'] 32072 8885 GESDSEEVRN True H1975_Epitope_Rep1 1120.4632598782798 1120.4626749679298 39.088 1 -1.317321122495522 0.39122167262399055 1.0 ['ENSG00000214338|ENST00000525778|SOGA3'] 56 6583 AAAGRTRGCCP True NCI_RA007_Epitope_Rep1 1061.48586741285 1061.4847699358602 29.619 2 -1.3173269219494725 0.39122167262399055 1.0 ['ENST00000371080.5_1_1:64239838-64474998:+|nuORF'] 80416 21313 PGKHRLGSLQV True NCI_RA007_Epitope_Rep2 1190.68838964654 1190.68728993586 88.18 2 -1.3173320813309506 0.39122167262399055 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|161|2|anti-sense', 'chr1:103745515-103750424|328|111.5|0.0|23.41|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|7', 'chr1:103745515-103749955|156|16.53|0.0|20.66|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|7', 'chr1:103745227-103750424|462|96.27|0.0|23.2|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|7', 'chr1:103651377-103750424|241|99.56|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|7', 'chr1:103651250-103750424|321|41.08|0.0|21.97|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|7', 'chr1:103651089-103750424|420|99.94|0.0|23.25|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|7'] 79870 6975 PEKSSGDVP True H1975_Epitope_Rep3 914.4345259492999 914.43342993586 31.791 2 -1.3173397031004317 0.39122167262399055 1.0 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C', 'ENST00000471157.2_1_11:2905236-2905503:-|nuORF'] 65055 9453 LQKWSLPYFRW True NCI_RA007_Epitope_Rep2 1522.8085047792197 1522.80740993586 41.382 2 -1.3173792020446247 0.39122167262399055 1.0 ['ENST00000491746.5_1_15:42120322-42127116:+|nuORF'] 117578 7029 TVSPDTAL True PC9_epitope_Rep4 802.4072485723 802.40614993586 34.287 2 -1.317388974753188 0.39122167262399055 1.0 ['ENSG00000151746|ENST00000652176|BICD1'] 95554 21817 RWRYRCWERRF True H1975_Epitope_Rep1 1712.8582660196396 1712.8571699358602 90.693 2 -1.317393091424906 0.39122167262399055 1.0 ['ENST00000328599.4_1_8:125463328-125463391:+|nuORF'] 40447 4578 HRAWPWEHVYM True H1975_Epitope_Rep2 1510.69282340398 1510.69117490379 22.713 3 -1.3174164346822563 0.39122167262399055 1.0 ['ENST00000593581.5_1_19:8439309-8454924:-|nuORF', 'ENST00000597785.1_1_19:8439309-8454924:-|nuORF'] 69445 19723 LTYQYLPYMSY True H1975_Epitope_Rep1 1440.6635399079598 1440.6624499358602 82.094 2 -1.317444339711439 0.39122167262399055 1.0 ['WDR81|p.I1319M|1|0.27|ENSG00000167716|chr17:1730936-1730936|C/G|missense_variant'] 91101 19647 RFQTELTQHH True NCI_RA007_Epitope_Rep5 1295.63708234967 1295.63542490379 82.485 3 -1.3174535507670282 0.39122167262399055 1.0 ['ENSG00000187187|ENST00000347077|ZNF546'] 60949 14183 LIDISSIPSY True H1975_Epitope_Rep2 1106.58594121026 1106.5848499358601 59.707 2 -1.3175741957964695 0.3912724296872179 1.0 ['RASGRP3|p.D127N|1|0.22|ENSG00000152689|chr2:33521965-33521965|G/A|missense_variant', 'nc|ENSG00000152689|Q8IV61-2|RASGRP3', 'ENSG00000152689|ENST00000403687|RASGRP3'] 29585 25368 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 104.96 3 -1.317589690561379 0.3912724296872179 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 20215 13342 ENKTIVFVETK True H1975_Epitope_Rep1 1306.7132669817 1306.7121699358602 56.427 2 -1.3176679196723748 0.39131114988868165 1.0 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 8708 14318 AVAQFKKY True PC9_epitope_Rep2 953.5334521449299 953.53234993586 60.338 2 -1.3177624864792565 0.39131114988868165 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 127563 7629 VNSIPHPE True H1975_Epitope_Rep3 891.44503106335 891.44392993586 34.327 2 -1.317891419171471 0.3913305092904592 1.0 ['KLK13|p.H105N|1|0.61|ENSG00000167759|chr19:51060020-51060020|G/T|missense_variant'] 126068 21714 VLEGEGVF True PC9_epitope_Rep5 848.4279840168799 848.42688993586 88.56 2 -1.317923814005244 0.39133103091418875 1.0 ['CD109|p.A76G|1|0.29|ENSG00000156535|chr6:73697552-73697552|C/G|missense_variant'] 110380 11731 TEVHQNWN True PC9_epitope_Rep1 1026.45190734894 1026.4508099358602 49.998 2 -1.317942524388922 0.39133103091418875 1.0 ['ENSG00000145414|ENST00000274054|NAF1'] 116420 5468 TTKESGEKMAH True NCI_RA007_Epitope_Rep2 1217.57103650545 1217.56992993586 25.888 2 -1.3179914674870872 0.39133103091418875 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 3844 11473 AGVRSTAILP True PC9_epitope_Rep2 983.5763795860698 983.5758349679301 49.448 1 -1.318033674862863 0.39133103091418875 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 126276 20895 VLHQLLYF True PC9_epitope_Rep4 1031.5804023373498 1031.57930993586 88.53 2 -1.3180457961286445 0.39133103091418875 1.0 ['ENST00000337451.7_1_15:23005397-23005541:-|nuORF'] 69731 18269 LVESFWKAK True PC9_epitope_Rep2 1106.6124307416198 1106.61132993586 75.593 2 -1.3180946636255158 0.39133835527424127 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 18030 14026 EIEQFLNEKRQ True H1975_Epitope_Rep3 1432.7310423041597 1432.72994993586 59.272 2 -1.3180974351137118 0.39134567945802196 1.0 ['ENSG00000196422|ENST00000356818|PPP1R26', 'PPP1R26|p.L1109Cfs*45|1|0.24|ENSG00000196422|chr9:135487831-135487831|G/-|frameshift_variant'] 131623 7512 VTLSGIPR True NCI_RA007_Epitope_Rep2 841.50215201665 841.50104993586 33.844 2 -1.3182331457309997 0.3913467207296091 1.0 ['ENST00000281405.8_1_2:20189760-20189823:-|nuORF'] 98772 24157 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 99.453 3 -1.3182614205804928 0.3913467207296091 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 30136 5176 FYNPTFEWYWE True H1975_Epitope_Rep1 1580.66123140884 1580.6595749037901 24.973 3 -1.3183746065008564 0.3913467207296091 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2'] 69102 4918 LTRFVKWPHY True H1975_Epitope_Rep2 1345.72952618253 1345.72789490379 23.999 3 -1.318383399402353 0.3913467207296091 1.0 ['ENST00000444895.1_1_9:20532627-20532768:+|nuORF'] 88301 19960 QSERNYLWREE True H1975_Epitope_Rep1 1508.70080480504 1508.69970993586 83.076 2 -1.3184394744558248 0.3913467207296091 1.0 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 115694 10613 TSALGGMKI True PC9_epitope_Rep1 876.47388866348 876.47278993586 45.715 2 -1.3184675918668118 0.3913467207296091 1.0 ['ENST00000342449.7_2_21:40562525-40562618:-|nuORF'] 80009 20940 PFEDALRVP True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 88.705 2 -1.3184910687073392 0.3913467207296091 1.0 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 54128 6910 KVPEKLAA True PC9_epitope_Rep2 854.5225531080598 854.52144993586 31.982 2 -1.3185226436922455 0.3913467207296091 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 69414 9361 LTWSFFKQSF True PC9_epitope_Rep4 1289.64445914589 1289.64280490379 43.617 3 -1.3185535419045515 0.3913467207296091 1.0 ['ENSG00000163933|ENST00000296292|RFT1', 'ENST00000471158.1_1_3:53137921-53154019:-|nuORF'] 77969 23402 NVMWMIKI True H1975_Epitope_Rep1 1033.5452797819298 1033.54418993586 97.262 2 -1.3185567255607564 0.3913467207296091 1.0 ['ENSG00000152078|ENST00000370203|TLCD4'] 55964 8206 LARRYAAL True PC9_epitope_Rep3 932.5555845718397 932.55448993586 36.544 2 -1.3186598291837877 0.39137810717809274 1.0 ['ENSG00000145743|ENST00000542267|FBXL17'] 19439 21747 ELNFYKIP True PC9_epitope_Rep1 1022.5436824754598 1022.5425899358601 88.483 2 -1.3186863240832745 0.3913854298261445 1.0 ['TLR4|p.L470Sfs*43|1|0.1|ENSG00000136869|chr9:117713534-117713547|GCTTGTCCAGTCTC/-|frameshift_variant', 'ENST00000490685.1_1_9:120470560-120471008:+|nuORF', 'nc|ENSG00000136869|O00206-2|TLR4', 'ENSG00000136869|ENST00000355622|TLR4'] 128647 22393 VPVGICHGSL True PC9_epitope_Rep5 980.5113368013599 980.51022993586 91.137 2 -1.3187242645541224 0.39138804336056404 1.0 ['CON__Q58D62'] 58655 9576 LERGFSVKYS True PC9_epitope_Rep3 1184.61897267404 1184.6178699358602 41.784 2 -1.318765447711947 0.39138804336056404 1.0 ['nc|ENSG00000139292|O75473-3|LGR5', 'nc|ENSG00000139292|O75473-2|LGR5', 'ENSG00000139292|ENST00000266674|LGR5'] 93948 14797 RRHKKIHAV True PC9_epitope_Rep5 1143.71012815063 1143.70849490379 61.917 3 -1.318888433059566 0.3914675521547679 1.0 ['ENSG00000142409|ENST00000610935|ZNF787'] 79404 6308 PASYNKEE True H1975_Epitope_Rep2 936.4188758851599 936.4183249679301 29.2 1 -1.3190187863749694 0.39151828681424444 1.0 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 127445 19173 VNIETSHMI True PC9_epitope_Rep5 1042.51173072418 1042.5106299358602 78.786 2 -1.3190274479550164 0.39151828681424444 1.0 ['ENSG00000154975|ENST00000451037|CA10'] 129381 7775 VRDTQAVRHYK True H1975_Epitope_Rep3 1371.7371307441101 1371.7360299358602 34.891 2 -1.3190492174914479 0.3915402475849043 1.0 ['ENSG00000101213|ENST00000542869|PTK6'] 13057 11367 DLPEQVPE True H1975_Epitope_Rep3 925.4392769765699 925.43872496793 48.835 1 -1.3190510319549664 0.3915402475849043 1.0 ['nc|ENSG00000172164|Q13884-2|SNTB1', 'ENSG00000172164|ENST00000517992|SNTB1'] 25699 6915 FERPSSTAQ True PC9_epitope_Rep3 1021.48287312405 1021.48176993586 31.611 2 -1.3190539722814176 0.3915402475849043 1.0 ['ENST00000299613.10_1_11:9596790-9596871:+|nuORF'] 91164 1155 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 6.1064 3 -1.3190870005963446 0.39154756748953373 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 69780 4813 LVFSATPEK True H1975_Epitope_Rep3 990.5385970950199 990.53750993586 23.639 2 -1.3193019026011015 0.39161503759398497 1.0 ['ENSG00000136205|ENST00000311160|TNS3', 'TNS3|p.E1320Dfs*89|1|0.48|ENSG00000136205|chr7:47283821-47283834|TGAGGGACTCCATC/-|frameshift_variant', 'TNS3|p.Q760Kfs*16|1|0.16|ENSG00000136205|chr7:47368369-47368369|C/-|frameshift_variant', 'TNS3|p.V1234Pfs*20|1|0.1|ENSG00000136205|chr7:47293805-47293806|CG/-|frameshift_variant', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 140469 18502 YRIGKVTS True NCI_RA007_Epitope_Rep3 922.52361573722 922.52250993586 80.965 2 -1.3193634133517718 0.39162235642277987 1.0 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'UQCRC2|p.L444Ffs*8|1|0.28|ENSG00000140740|chr16:21983137-21983138|-/T|frameshift_variant', 'ENSG00000140740|ENST00000268379|UQCRC2'] 64979 16010 LQFYFFCTF True PC9_epitope_Rep4 1214.5470536037399 1214.54539490379 69.516 3 -1.319391311384246 0.3916296750754869 1.0 ['OR5I1|p.F166Lfs*3|1|0.57|ENSG00000167825|chr11:55935906-55935906|G/-|frameshift_variant', 'ENSG00000167825|ENST00000301532|OR5I1'] 119268 25330 VALKPLGGL True PC9_epitope_Rep2 866.5589386167799 866.55784993586 103.11 2 -1.3196034018335547 0.39172851832693767 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 120057 7588 VDSSQFSEY True H1975_Epitope_Rep3 1060.43491987212 1060.43382993586 34.168 2 -1.3196118609436518 0.39172851832693767 1.0 ['ENSG00000134504|ENST00000580059|KCTD1', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000284006.10_1_19:34303676-34303850:+|nuORF', 'ENST00000577255.1_1_18:24035709-24035892:-|nuORF'] 86665 21136 QLHRRKVIS True PC9_epitope_Rep6 1135.69380938015 1135.6921649037902 94.146 3 -1.319624756084857 0.39173583543846985 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 55614 13081 LAIIFLPM True NCI_RA007_Epitope_Rep1 916.54559705176 916.54448993586 54.876 2 -1.319681494942696 0.39175046913342637 1.0 ['nc|ENSG00000175193|Q9H300-2|PARL', 'ENSG00000175193|ENST00000317096|PARL'] 74458 5080 NEVMALLRD True NCI_RA007_Epitope_Rep1 1059.5382798251899 1059.5371899358602 23.844 2 -1.3197034114371557 0.39175046913342637 1.0 ['ENSG00000167985|ENST00000301761|SDHAF2', 'ENST00000542074.1_1_11:61197581-61213540:+|nuORF'] 139257 22612 YLIHILIP True PC9_epitope_Rep2 980.6058888092 980.60478993586 92.474 2 -1.3197313922885066 0.3917577857168633 1.0 ['ENSG00000170925|ENST00000302917|TEX13B'] 119272 25636 VALKPLGGL True PC9_epitope_Rep5 866.5589386167799 866.55784993586 103.94 2 -1.3197640271049873 0.3917651021242813 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 21562 23313 ERPKELVRKP True PC9_epitope_Rep3 1250.7459045226597 1250.74426490379 94.953 3 -1.3197999012092188 0.3917844469838215 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16'] 47411 10088 IVLGVLAEHDP True PC9_epitope_Rep3 1161.6393737654498 1161.63772490379 43.757 3 -1.3199014337475437 0.39182784834488066 1.0 ['ENST00000552666.1_1_14:36235117-36235897:+|nuORF'] 137249 16720 YCGSSEED True PC9_epitope_Rep3 888.2807277298399 888.27962993586 69.452 2 -1.3199423805099038 0.39184719198431506 1.0 ['ENSG00000173258|ENST00000309235|ZNF483'] 119264 24894 VALKPLGGL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 103.25 2 -1.3199982210241723 0.39185499681272024 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 19392 4346 ELLTMDPDTED True NCI_RA007_Epitope_Rep2 1277.53331358405 1277.53220993586 21.541 2 -1.3199987829850235 0.39185499681272024 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 119269 25509 VALKPLGGL True PC9_epitope_Rep2 866.5589386167799 866.55784993586 103.8 2 -1.3200278096394227 0.39185499681272024 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 113522 15786 TLTKEKVPLER True NCI_RA007_Epitope_Rep2 1312.7714505641597 1312.7703499358602 66.121 2 -1.320027863026032 0.39185499681272024 1.0 ['NDUFAF7|p.N362Kfs*5|1|0.34|ENSG00000003509|chr2:37247598-37247599|-/A|frameshift_variant', 'ENSG00000003509|ENST00000002125|NDUFAF7', 'ENST00000474154.5_1_2:37458848-37468954:+|nuORF'] 122347 6177 VGDELFVVMEY True H1975_Epitope_Rep1 1299.6056906786698 1299.60458993586 28.829 2 -1.320034524998316 0.39185499681272024 1.0 ['ENSG00000180370|ENST00000327134|PAK2'] 5458 12921 ALVPGRRA True PC9_epitope_Rep5 838.51371975986 838.51262993586 54.711 2 -1.3200392884722645 0.39185499681272024 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 121117 24160 VERLRARRRE True PC9_epitope_Rep3 1339.7908976524698 1339.7898099358601 98.219 2 -1.3200488966313757 0.39186231117098047 1.0 ['ENSG00000154252|ENST00000192314|GAL3ST2'] 123993 11686 VGSEAFVL True PC9_epitope_Rep1 820.4330693973199 820.43196993586 49.827 2 -1.320101003282925 0.39186962535329845 1.0 ['nc|ENSG00000167930|Q9H0X4-2|FAM234A', 'ENSG00000167930|ENST00000399932|FAM234A'] 123656 12303 VGQNELKI True PC9_epitope_Rep6 899.5076313199098 899.50652993586 58.715 2 -1.3201480715623828 0.39187693935968054 1.0 ['nc|ENSG00000104218|Q1MSJ5-1|CSPP1', 'ENSG00000104218|ENST00000678616|CSPP1', 'nc|ENSG00000104218|Q1MSJ5|CSPP1', 'nc|ENSG00000104218|Q1MSJ5-2|CSPP1'] 131616 14487 VTLRGSPDWE True PC9_epitope_Rep2 1158.5669371011797 1158.5658499358601 60.994 2 -1.3201967986881995 0.39188945412562687 1.0 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 12979 21859 DLLPLSLIPV True PC9_epitope_Rep6 1078.66379760814 1078.6627099358602 96.982 2 -1.3201979407723825 0.39188945412562687 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2'] 126595 10460 VLLWLRYMFK True NCI_RA007_Epitope_Rep2 1367.7787848740697 1367.77768993586 45.281 2 -1.320227884629151 0.39188945412562687 1.0 ['ENSG00000212127|ENST00000537503|TAS2R14'] 21280 18703 ERDVELFF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 84.583 2 -1.3202398170544762 0.39188945412562687 1.0 ['SRSF4|p.R20L|1|0.89|ENSG00000116350|chr1:29181694-29181694|C/A|missense_variant'] 10650 15623 CPMLQNLA True NCI_RA007_Epitope_Rep4 888.41974491564 888.41864993586 67.866 2 -1.3202635971439196 0.39188945412562687 1.0 ['ENST00000218789.9_3_13:111957024-111957249:+|nuORF'] 4942 7435 ALGEIVPTA True H1975_Epitope_Rep3 869.4858332461699 869.48472993586 33.577 2 -1.3203229697551944 0.39189676736578793 1.0 ['ENSG00000100625|ENST00000216513|SIX4'] 122041 793 VFVVVVLVLLA True PC9_epitope_Rep5 1169.77876779073 1169.77711490379 4.4097 3 -1.3203743501919116 0.39191610645436725 1.0 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8'] 117576 10004 TVSNRSVTG True PC9_epitope_Rep2 919.4723084403499 919.47120993586 43.809 2 -1.3204848525504504 0.3919380441579682 1.0 68748 12168 LTLDTWEP True H1975_Epitope_Rep2 973.47566248529 973.47511496793 51.887 1 -1.3205004772651014 0.3919380441579682 1.0 ['ENSG00000114331|ENST00000326793|ACAP2', 'ACAP2|p.S453C|1|0.43|ENSG00000114331|chr3:195301612-195301612|G/C|missense_variant', 'ENST00000475905.5_1_3:195016371-195022834:-|nuORF'] 93491 5887 RQKEELEREQQ True PC9_epitope_Rep1 1471.73791858975 1471.73626490379 27.461 3 -1.3205057244636633 0.3919380441579682 1.0 ['ENSG00000104164|ENST00000220531|BLOC1S6'] 18526 9163 EKKEESEEE True H1975_Epitope_Rep1 1135.48807764379 1135.48698993586 40.152 2 -1.320548003780662 0.3919694072657744 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000494917.6_1_9:100069637-100105846:+|nuORF', 'ENST00000460482.6_1_9:100070037-100107975:+|nuORF', 'ENST00000530011.1_1_9:100092818-100111440:+|nuORF', 'ENST00000529787.2_1_9:100092438-100109914:+|nuORF'] 11676 12876 DGTFSAFP True PC9_epitope_Rep1 840.3653837603199 840.36428993586 54.401 2 -1.3205716450693814 0.3919720054353708 1.0 ['ENST00000378952.7_1_10:12222436-12228317:-|nuORF'] 84072 24831 PWASLYRER True NCI_RA007_Epitope_Rep4 1176.6039913162401 1176.60235490379 107.98 3 -1.3205788238468799 0.3919720054353708 1.0 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 14758 8865 DVNGTLVSIY True H1975_Epitope_Rep3 1079.54989005471 1079.5487899358602 39.101 2 -1.3206431428282277 0.3919776837245094 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 80389 9473 PGHRCTLP True NCI_RA007_Epitope_Rep1 879.43850621427 879.43740993586 40.843 2 -1.3206672124161767 0.3919776837245094 1.0 ['ENST00000340573.8_1_11:57319572-57319665:-|nuORF'] 66784 13039 LSLRQVSHPRR True NCI_RA007_Epitope_Rep2 1347.7847496428699 1347.78364993586 55.345 2 -1.320728217821629 0.3919776837245094 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 35559 16461 GSVRFRWYQGF True H1975_Epitope_Rep1 1401.6942033029698 1401.69310993586 68.682 2 -1.3207441776327395 0.3919776837245094 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 52367 20604 KKKRLEQPAEL True H1975_Epitope_Rep2 1338.7983340183398 1338.79669490379 85.348 3 -1.3207557595121586 0.3919776837245094 1.0 ['ENST00000355358.1_1_10:8093256-8094410:-|nuORF'] 78753 5480 PAAGKGAVR True PC9_epitope_Rep1 825.48208527841 825.48098993586 25.909 2 -1.320803606718638 0.3919776837245094 1.0 ['ENST00000394071.6_2_14:74184720-74184954:-|nuORF'] 67140 8984 LSQQPGGPDPA True PC9_epitope_Rep2 1065.5090878718897 1065.50798993586 39.911 2 -1.3208196238493122 0.3919776837245094 1.0 ['ENST00000228506.7_1_12:121135231-121135438:+|nuORF'] 100781 16498 SLEEKDQRI True PC9_epitope_Rep6 1116.5775017848798 1116.57640993586 75.89 2 -1.3208245885172267 0.3919776837245094 1.0 ['nc|ENSG00000263155|P0CAP1-2|MYZAP', 'nc|ENSG00000263155|P0CAP1-8|MYZAP', 'nc|ENSG00000263155|P0CAP1-5|MYZAP', 'nc|ENSG00000263155|P0CAP1-10|MYZAP', 'nc|ENSG00000263155|P0CAP1-7|MYZAP', 'nc|ENSG00000263155|P0CAP1-6|MYZAP', 'nc|ENSG00000263155|P0CAP1-9|MYZAP', 'nc|ENSG00000263155|P0CAP1-3|MYZAP', 'nc|ENSG00000263155|P0CAP1-4|MYZAP', 'ENSG00000263155|ENST00000267853|MYZAP', 'nc|ENSG00000263155|P0CAP1-11|MYZAP'] 20098 4306 EMLRGMYLTR True NCI_RA007_Epitope_Rep2 1268.6369483206397 1268.63584993586 21.389 2 -1.3208381713776338 0.3919776837245094 1.0 ['ENST00000497435.1_1_9:116356439-116356619:+|nuORF', 'nc|ENSG00000138835|P49796-7|RGS3', 'nc|ENSG00000138835|P49796-8|RGS3'] 63922 17224 LNREILQLP True PC9_epitope_Rep2 1094.64479349906 1094.64368993586 71.513 2 -1.3209132585720693 0.39197816599136737 1.0 ['ENSG00000089558|ENST00000264661|KCNH4'] 119018 18827 VAFEIKKL True PC9_epitope_Rep5 946.5851533646198 946.58404993586 77.433 2 -1.3209141681595429 0.39197816599136737 1.0 ['ENST00000514753.1_1_5:68485479-68492964:+|nuORF', 'ENSG00000153044|ENST00000283006|CENPH'] 129407 7030 VREWYRFHYIN True PC9_epitope_Rep1 1581.78408093653 1581.78244490379 31.847 3 -1.3209317815364023 0.39197816599136737 1.0 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 91434 4645 RHLLVLLLLLS True NCI_RA007_Epitope_Rep1 1288.85947772292 1288.85838993586 22.154 2 -1.320968827843858 0.39197816599136737 1.0 ['ENSG00000104901|ENST00000221498|DKKL1'] 44573 18228 ILPKNFVI True PC9_epitope_Rep4 942.5902387450599 942.58914993586 78.185 2 -1.3209742598889136 0.39197816599136737 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026', 'ENST00000540714.1_1_9:5919686-5933837:-|nuORF'] 116032 4096 TSMNYMLATRL True NCI_RA007_Epitope_Rep4 1299.6315285870298 1299.62989490379 22.032 3 -1.3210603782436066 0.3920010578703147 1.0 ['ENSG00000119685|ENST00000298832|TTLL5', 'ENST00000555422.5_1_14:76198560-76243086:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-2|TTLL5'] 117898 10368 TWKVAPFVRAW True H1975_Epitope_Rep3 1359.7451762466699 1359.7440699358601 44.935 2 -1.3210896291778118 0.3920010578703147 1.0 ['ENST00000530534.1_1_11:71184711-71189599:+|nuORF'] 95750 13353 RYHRHRHIEWA True H1975_Epitope_Rep3 1559.79704566207 1559.79594993586 56.627 2 -1.321122961959534 0.3920010578703147 1.0 ['TRIM49C|p.P128H|1|0.56|ENSG00000204449|chr11:90035594-90035594|C/A|missense_variant'] 56897 19384 LDPYYSNKK True H1975_Epitope_Rep2 1126.5658744720201 1126.56476993586 80.454 2 -1.3211510785610137 0.3920010578703147 1.0 ['ENSG00000007314|ENST00000435607|SCN4A'] 114185 19947 TPLELKLKH True PC9_epitope_Rep3 1077.65462990677 1077.6535299358602 81.969 2 -1.3212560910767837 0.3920010578703147 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98'] 139525 15380 YLSRIVIFI True PC9_epitope_Rep6 1122.68011637862 1122.6790099358602 71.305 2 -1.3212677807298856 0.3920010578703147 1.0 ['ENSG00000139679|ENST00000620633|LPAR6'] 12313 8588 DIPIYANVHK True NCI_RA007_Epitope_Rep5 1168.6240580544797 1168.62296993586 39.714 2 -1.3212781559229907 0.3920010578703147 1.0 ['ARAP2|p.P1501Qfs*6|1|1.0|ENSG00000047365|chr4:36083374-36083374|G/-|frameshift_variant', 'ENSG00000047365|ENST00000303965|ARAP2', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 124458 16736 VGVLILFMFR True NCI_RA007_Epitope_Rep4 1193.69947192421 1193.69836993586 72.559 2 -1.3213729445229507 0.3920010578703147 1.0 ['PNPLA7|p.A228Lfs*27|1|0.31|ENSG00000130653|chr9:137522845-137522849|GTGCA/-|frameshift_variant', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 20247 5876 ENLVANTARSP True H1975_Epitope_Rep2 1170.5992998586198 1170.59820993586 27.588 2 -1.3214341919650265 0.3920010578703147 1.0 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant'] 83043 7541 PSLESPPIP True H1975_Epitope_Rep3 935.4963979298699 935.49530993586 33.99 2 -1.321436614327412 0.3920010578703147 1.0 ['ENST00000409638.7_1_2:220113277-220113556:+|nuORF'] 91399 18327 RHHSLDSWRP True NCI_RA007_Epitope_Rep3 1289.6377510560098 1289.63611490379 80.254 3 -1.3214422561064396 0.3920010578703147 1.0 ['ENST00000588409.1_1_19:10738400-10738638:+|nuORF'] 13053 9300 DLPDRDTWK True NCI_RA007_Epitope_Rep2 1144.55128703704 1144.55018993586 40.781 2 -1.3214485165968337 0.3920010578703147 1.0 ['ENSG00000157103|ENST00000287766|SLC6A1', 'SLC6A1|p.I62Sfs*22|1|0.84|ENSG00000157103|chr3:11017393-11017393|C/-|frameshift_variant'] 67091 10101 LSQFSLEK True PC9_epitope_Rep1 950.5072969667399 950.50618993586 43.725 2 -1.3214726446072942 0.3920010578703147 1.0 ['nc|ENSG00000214367|Q68CZ6-2|HAUS3', 'ENSG00000214367|ENST00000443786|HAUS3'] 10918 14467 DACLVPNTP True PC9_epitope_Rep5 928.43241777432 928.4318649679301 60.648 1 -1.3215750640164499 0.3920276963023513 1.0 ['ENSG00000172689|ENST00000308287|MS4A10'] 93436 17947 RQGHHAAG True NCI_RA007_Epitope_Rep4 832.4052319400398 832.4041299358599 77.651 2 -1.3216005597284173 0.3920276963023513 1.0 ['ENST00000525164.5_1_1:1248165-1249114:-|nuORF'] 62303 11928 LLGAERGL True PC9_epitope_Rep1 827.4865019525099 827.48540993586 50.746 2 -1.3217614129130804 0.39204702544807607 1.0 ['ENST00000573525.1_1_16:2962029-2979726:+|nuORF'] 124083 4859 VGSLRTVD True NCI_RA007_Epitope_Rep1 845.46068112749 845.45958993586 22.981 2 -1.32183432074195 0.3920569285508222 1.0 ['ENST00000538037.5_1_12:132413837-132416751:+|nuORF'] 57898 16057 LEFWRKFGIG True NCI_RA007_Epitope_Rep1 1251.6764279805097 1251.6753299358602 66.562 2 -1.3218995220566905 0.3920569285508222 1.0 ['nc|ENSG00000183032|Q9BQT8-2|SLC25A21', 'ENSG00000183032|ENST00000331299|SLC25A21'] 132802 16411 VVKLRKISDW True NCI_RA007_Epitope_Rep3 1242.7448418935 1242.74320490379 72.288 3 -1.321915869034655 0.3920569285508222 1.0 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'ENST00000433355.6_1_6:146231577-146267398:-|nuORF'] 130330 10635 VSKEQDHFLIS True PC9_epitope_Rep2 1301.66156576201 1301.6604699358602 46.22 2 -1.3219554344310995 0.392059523523331 1.0 ['nc|ENSG00000075340|P35612-2|ADD2', 'nc|ENSG00000075340|P35612-8|ADD2', 'nc|ENSG00000075340|P35612-9|ADD2', 'nc|ENSG00000075340|P35612-4|ADD2', 'nc|ENSG00000075340|P35612-3|ADD2', 'ENSG00000075340|ENST00000264436|ADD2', 'nc|ENSG00000075340|P35612-5|ADD2', 'nc|ENSG00000075340|P35612-6|ADD2'] 88452 11600 QSRFQFYFQQK True H1975_Epitope_Rep1 1505.7415474182096 1505.7404499358602 49.608 2 -1.3219774004000748 0.392059523523331 1.0 ['ENSG00000100288|ENST00000406938|CHKB'] 112328 11220 TLAASRLL True PC9_epitope_Rep2 843.51780208079 843.51670993586 48.487 2 -1.3220823127887753 0.3920788508924815 1.0 ['nc|ENSG00000142025|Q8IXT2-2|DMRTC2'] 40279 21515 HQLFTERWP True H1975_Epitope_Rep2 1212.60399131624 1212.60288993586 89.016 2 -1.322110428630144 0.3920861579883648 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 84692 9041 QDLKELER True H1975_Epitope_Rep1 1029.5454733806098 1029.54436993586 39.683 2 -1.3222073510101495 0.3921179779332228 1.0 ['ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 8609 14368 ATYRFTIV True PC9_epitope_Rep4 969.5283667644899 969.52726993586 63.175 2 -1.3222709417811085 0.3921179779332228 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF', 'ENSG00000165923|ENST00000525123|AGBL2'] 138688 5239 YILRHMPTLHR True H1975_Epitope_Rep1 1435.7870581419902 1435.78540490379 25.215 3 -1.3222976071836723 0.3921179779332228 1.0 ['nc|ENSG00000153303|Q8N878-2|FRMD1', 'ENSG00000153303|ENST00000283309|FRMD1'] 41330 6027 HVYISHVR True H1975_Epitope_Rep3 1009.54574816413 1009.54464993586 28.197 2 -1.3223914600921627 0.3921179779332228 1.0 ['ZNF532|p.D1038H|1|0.05|ENSG00000074657|chr18:58953761-58953761|G/C|missense_variant'] 90763 7135 RERRREQLRQW True NCI_RA007_Epitope_Rep1 1611.8818379151896 1611.88018490379 31.744 3 -1.3224011915981282 0.3921179779332228 1.0 ['nc|ENSG00000125503|Q9BZL4-2|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-3|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-4|PPP1R12C', 'ENSG00000125503|ENST00000263433|PPP1R12C'] 22836 11368 EVALLRELKH True H1975_Epitope_Rep1 1206.70845638478 1206.70734993586 48.705 2 -1.3224289844129016 0.3921179779332228 1.0 ['CDK19|p.I67V|1|0.22|ENSG00000155111|chr6:110746131-110746131|T/C|missense_variant'] 72730 18738 MNIIYLRRFK True NCI_RA007_Epitope_Rep2 1352.7750964759596 1352.77398993586 77.685 2 -1.3224904082023912 0.3921325897793375 1.0 ['nc|ENSG00000171962|Q9H069-2|DRC3', 'ENSG00000171962|ENST00000399187|DRC3'] 105477 18971 SRWNLSVDWK True H1975_Epitope_Rep1 1289.6516697846498 1289.6500349037901 79.099 3 -1.3224956266260777 0.3921325897793375 1.0 ['ENSG00000144407|ENST00000272847|PTH2R'] 46364 6164 ISRNMLMVFLR True NCI_RA007_Epitope_Rep5 1378.7577321596598 1378.75609490379 30.388 3 -1.322553112680745 0.3921639324559822 1.0 ['ENST00000503946.1_1_5:134131747-134131804:+|nuORF'] 16675 13419 EERDHWQQFYF True NCI_RA007_Epitope_Rep1 1583.67934108447 1583.67824993586 56.201 2 -1.3226045720604933 0.3922051701138098 1.0 ['ENST00000471501.1_1_1:11709834-11710766:-|nuORF', 'FBXO2|p.G142Wfs*22|1|0.14|ENSG00000116661|chr1:11650042-11650043|-/A|frameshift_variant', 'ENST00000466919.1_1_1:11710000-11714093:-|nuORF', 'ENSG00000116661|ENST00000354287|FBXO2'] 93889 22928 RRFHREFPKFF True PC9_epitope_Rep4 1565.8367852157296 1565.83568993586 96.413 2 -1.3227523278193531 0.3922051701138098 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'ACACA|p.A1745Qfs*32|1|0.56|ENSG00000278540|chr17:37161897-37161897|C/-|frameshift_variant'] 123990 8061 VGSDRGFLA True PC9_epitope_Rep1 920.4715801643599 920.47048993586 35.829 2 -1.3228180279530308 0.3922051701138098 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 18972 8089 ELELQRVSA True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 40.625 2 -1.3228186751989532 0.3922051701138098 1.0 ['ENST00000440783.2_1_16:46918774-46919059:+|nuORF'] 40699 12048 HRRWEHWWRME True NCI_RA007_Epitope_Rep2 1707.7953314099097 1707.7942299358601 51.456 2 -1.3228565026220425 0.39221812326511973 1.0 ['ENST00000398117.1_1_18:60791148-60791340:-|nuORF'] 113775 20415 TMPILSYPSI True PC9_epitope_Rep5 1120.58383303528 1120.58272993586 83.561 2 -1.3229859829642996 0.39221812326511973 1.0 ['GRM1|p.P730T|1|0.06|ENSG00000152822|chr6:146399227-146399227|C/A|missense_variant'] 93999 17344 RRKKYGIVL True PC9_epitope_Rep6 1131.72404687927 1131.72241490379 79.328 3 -1.3230002506729523 0.39221812326511973 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 103481 21305 SPQIRKTAT True PC9_epitope_Rep3 1000.56654317836 1000.56544993586 87.245 2 -1.3230015233379608 0.39221812326511973 1.0 ['ENSG00000266028|ENST00000573034|SRGAP2'] 89443 5863 QYEERWQWHRL True NCI_RA007_Epitope_Rep1 1629.7800581852498 1629.77896993586 26.858 2 -1.3230110758846119 0.39221812326511973 1.0 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant'] 138693 17170 YIMNRFVI True NCI_RA007_Epitope_Rep5 1054.5633723742199 1054.56226993586 72.817 2 -1.3230491617496727 0.39221812326511973 1.0 ['ENST00000533466.1_1_11:28113029-28116209:-|nuORF'] 23352 9727 EVRKWFSDR True NCI_RA007_Epitope_Rep2 1221.6254550368099 1221.6243499358602 42.457 2 -1.3231396686278536 0.39221812326511973 1.0 ['nc|ENSG00000174306|Q9H4I2-2|ZHX3', 'ENSG00000174306|ENST00000683867|ZHX3'] 108841 6501 SYWRVWIYWQ True NCI_RA007_Epitope_Rep5 1485.7193554216499 1485.71824993586 31.672 2 -1.3231516321328507 0.39221812326511973 1.0 ['ENST00000295992.7_1_3:142606565-142606607:-|nuORF'] 120104 20477 VDYNPRDNQLY True PC9_epitope_Rep1 1395.64189294659 1395.64078993586 83.577 2 -1.3231704577181942 0.39221812326511973 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'ADGRL2|p.K951Nfs*54|1|0.08|ENSG00000117114|chr1:81970440-81970440|A/-|frameshift_variant', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2', 'ENSG00000072071|ENST00000361434|ADGRL1', 'nc|ENSG00000072071|O94910|ADGRL1', 'ADGRL1|p.G690Afs*56|1|0.33|ENSG00000072071|chr19:14159185-14159185|C/-|frameshift_variant', 'ADGRL1|p.N732Rfs*16|1|0.07|ENSG00000072071|chr19:14158522-14158523|-/GTACC|frameshift_variant'] 118661 5997 TYSRNERWEY True H1975_Epitope_Rep3 1402.62657723562 1402.62548993586 28.08 2 -1.3232264946345405 0.39221812326511973 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 56226 22114 LCKKIYFI True PC9_epitope_Rep2 1026.5936098733398 1026.59250993586 90.538 2 -1.3233046959469226 0.39223744292237445 1.0 ['nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2'] 139872 21601 YPQTTDSK True NCI_RA007_Epitope_Rep5 938.4345259493 938.43342993586 90.176 2 -1.323374317917286 0.39225676211533145 1.0 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 87147 6032 QPEYRASVP True PC9_epitope_Rep2 1045.5192586327698 1045.5181699358602 28.596 2 -1.323474515996544 0.392288096897455 1.0 ['PCDHGA12|p.R718Afs*15|1|0.68|ENSG00000253159|chr5:141432909-141432909|G/-|frameshift_variant', 'nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12'] 64187 10003 LPGIHVSA True PC9_epitope_Rep2 792.4493881678 792.44828993586 43.805 2 -1.3235120800215148 0.39231000300390506 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 5517 12764 ALYNAEEL True NCI_RA007_Epitope_Rep3 921.4443623570099 921.44326993586 57.444 2 -1.323547628803169 0.39231000300390506 1.0 ['CCDC18|p.L1097Afs*7|1|0.11|ENSG00000122483|chr1:93254563-93254564|-/GCTTTAAACACTCATAT|frameshift_variant', 'nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18'] 57880 10719 LEFLTTKS True H1975_Epitope_Rep3 937.51204799401 937.51094993586 46.307 2 -1.3235534604289751 0.39231000300390506 1.0 ['IFIT5|p.R294Gfs*4|1|0.28|ENSG00000152778|chr10:89418079-89418079|A/-|frameshift_variant', 'ENSG00000152778|ENST00000371795|IFIT5', 'nc|ENSG00000152778|Q13325-2|IFIT5'] 128794 13768 VPYSCCLP True PC9_epitope_Rep3 880.38229677776 880.38118993586 58.04 2 -1.323662195514379 0.39234863686063415 1.0 ['TSPAN33|p.P194H|1|0.36|ENSG00000158457|chr7:129166899-129166899|C/A|missense_variant', 'ENSG00000158457|ENST00000486685|TSPAN33'] 120382 14810 VEEKPLSHRN True NCI_RA007_Epitope_Rep1 1207.6309343400699 1207.62982993586 61.666 2 -1.3236727915787387 0.39234863686063415 1.0 ['ENSG00000073711|ENST00000264977|PPP2R3A'] 125913 24355 VLCPGLHS True NCI_RA007_Epitope_Rep5 824.4214591678001 824.42036993586 101.15 2 -1.3236940862434234 0.39235593790551254 1.0 ['ENST00000431992.5_2_1:33789663-33789792:-|nuORF'] 67501 7498 LSTAGPIPRTS True H1975_Epitope_Rep3 1098.6033226099 1098.6022299358601 33.822 2 -1.32376186697343 0.3923632387749462 1.0 ['ENSG00000161692|ENST00000315005|DBF4B'] 832 4693 ACTVPRADP True H1975_Epitope_Rep2 928.44365116436 928.44254993586 23.146 2 -1.3239842683374157 0.39244262885978615 1.0 ['ENST00000360862.9_2_16:3534964-3535998:+|nuORF', 'ENST00000407558.8_1_16:3534861-3535998:+|nuORF'] 24621 17650 FAISFLLRCKR True NCI_RA007_Epitope_Rep4 1352.77509647596 1352.77398993586 76.369 2 -1.324058268943145 0.39245251282544186 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant'] 50011 20005 KIYHRRLRKS True NCI_RA007_Epitope_Rep5 1355.82622053203 1355.82457490379 83.866 3 -1.324059349390083 0.39245251282544186 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.G402Efs*4|1|0.39|ENSG00000106823|chr9:92510000-92510000|C/-|frameshift_variant'] 44081 19627 IILSANYIS True PC9_epitope_Rep6 992.55424715916 992.55314993586 88.154 2 -1.324072844779327 0.39245251282544186 1.0 ['LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 138456 7337 YHMVCLDP True H1975_Epitope_Rep2 976.4146595351999 976.41356993586 33.162 2 -1.3241276098149057 0.39247182641708916 1.0 ['ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 8709 14959 AVAQFKKY True PC9_epitope_Rep3 953.5334521449299 953.53234993586 62.671 2 -1.324174612651955 0.3924868754580075 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 128349 9221 VPQLTRPGSFL True PC9_epitope_Rep2 1213.68190728377 1213.68080993586 40.808 2 -1.324268692332048 0.3924868754580075 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 121077 12315 VEQYRREREHE True H1975_Epitope_Rep1 1529.7335019156496 1529.73240993586 52.397 2 -1.3243236457645977 0.3924868754580075 1.0 ['ENST00000481998.1_1_6:31513879-31514336:-|nuORF', 'nc|ENSG00000213760|O95670-3|ATP6V1G2', 'ENSG00000213760|ENST00000303892|ATP6V1G2', 'ENST00000475917.1_1_6:31510065-31514336:-|nuORF'] 114878 8257 TQRGRHQDWR True NCI_RA007_Epitope_Rep2 1338.66536278618 1338.6642699358601 36.756 2 -1.3243332873561746 0.3924868754580075 1.0 ['ENSG00000189186|ENST00000451261|DCAF8L2', 'DCAF8L2|p.S598N|1|0.75|ENSG00000189186|chrX:27748688-27748688|G/A|missense_variant'] 121187 11193 VESHWKVC True PC9_epitope_Rep6 986.4643866089399 986.46328993586 54.027 2 -1.324349920623683 0.3924868754580075 1.0 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-3|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-4|TAX1BP1'] 3562 15541 AGLVISPLW True PC9_epitope_Rep4 954.5538532363399 954.55274993586 67.702 2 -1.3243584924500555 0.3924868754580075 1.0 ['ENSG00000151665|ENST00000281382|PIGF'] 97081 5508 SDGCLIKVHR True H1975_Epitope_Rep2 1126.59171238038 1126.59007490379 26.199 3 -1.3243683877628023 0.3924868754580075 1.0 ['nc|ENSG00000133641|Q8N999-3|RLIG1', 'ENST00000552121.5_1_12:88429328-88442196:+|nuORF', 'ENST00000547468.1_1_12:88436564-88442196:+|nuORF', 'ENSG00000133641|ENST00000356891|C12orf29', 'ENST00000550333.5_1_12:88429286-88442196:+|nuORF', 'ENST00000548511.5_1_12:88439351-88442196:+|nuORF'] 34271 16459 GNTLTSLK True NCI_RA007_Epitope_Rep2 832.46543215476 832.46432993586 68.75 2 -1.3245509896268757 0.39251348461732516 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 11406 15440 DETFQEKM True PC9_epitope_Rep3 1026.4328116971399 1026.43170993586 64.543 2 -1.3245557946482467 0.39251348461732516 1.0 ['nc|ENSG00000089472|Q9BQS7-2|HEPH', 'ENSG00000089472|ENST00000343002|HEPH', 'nc|ENSG00000089472|Q9BQS7-3|HEPH', 'nc|ENSG00000089472|Q9BQS7-4|HEPH'] 41878 20146 ICEKHILWLKD True NCI_RA007_Epitope_Rep1 1396.7536923250398 1396.7525899358602 82.572 2 -1.3245710412682175 0.3925160670310529 1.0 ['nc|ENSG00000171988|Q15652-3|JMJD1C', 'ENSG00000171988|ENST00000399262|JMJD1C'] 60379 7667 LGTGRPLAA True PC9_epitope_Rep2 854.4974009893799 854.49630993586 34.86 2 -1.3246706938453543 0.3925160670310529 1.0 ['ENST00000553700.5_2_14:31675086-31676852:-|nuORF'] 68786 21322 LTLLHVLH True PC9_epitope_Rep2 944.5807366905201 944.57962993586 87.479 2 -1.3247078468839397 0.39251864932069624 1.0 ['nc|ENSG00000059377|P24557-2|TBXAS1', 'ENSG00000059377|ENST00000448866|TBXAS1', 'nc|ENSG00000059377|P24557-3|TBXAS1'] 80847 11677 PHRRQDPK True NCI_RA007_Epitope_Rep4 1032.5577098301599 1032.55660993586 51.875 2 -1.324728889966399 0.39251864932069624 1.0 ['ENST00000398495.6_1_18:47803541-47806282:-|nuORF'] 37158 21759 GVQNITAA True PC9_epitope_Rep4 772.40791727864 772.4073649679301 91.89 1 -1.3247571220499283 0.3925212314862641 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 116024 16989 TSLRVGRK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 72.107 2 -1.3247936141228105 0.3925212314862641 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 22946 14995 EVEGVGHWYQR True H1975_Epitope_Rep3 1358.6367479965 1358.63564993586 63.068 2 -1.3248875063657597 0.3925598491309414 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 128874 8417 VQEILRDLAHV True H1975_Epitope_Rep1 1291.7248347249101 1291.72372993586 37.303 2 -1.325082018188888 0.3925598491309414 1.0 ['nc|ENSG00000108852|Q14168-6|MPP2', 'nc|ENSG00000108852|Q14168-2|MPP2', 'nc|ENSG00000108852|Q14168-3|MPP2', 'nc|ENSG00000108852|Q14168|MPP2', 'nc|ENSG00000108852|Q14168-4|MPP2', 'ENST00000520319.1_1_17:41960558-41984643:-|nuORF'] 28342 8804 FRSSFRAGL True PC9_epitope_Rep1 1039.5563128478298 1039.5552099358601 38.706 2 -1.3251545512250336 0.3925911689809254 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|217|1|anti-sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|346|3|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|198|1|anti-sense', 'chr1:245814415-245816795|243|17.47|0.01|10.93|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|93', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|93', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|288|2|anti-sense'] 7756 8875 ASQQQVEVYKI True H1975_Epitope_Rep3 1291.67721582615 1291.67610993586 39.138 2 -1.3252248771904191 0.3925984649201831 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 15743 7553 ECGCTPFCVPA True PC9_epitope_Rep3 1125.42932362317 1125.4282299358601 34.053 2 -1.325305250751972 0.39262035168636494 1.0 ['ENSG00000117983|ENST00000529681|MUC5B'] 42587 7281 IEGAEAALHQK True H1975_Epitope_Rep3 1165.6091362663299 1165.60802993586 32.981 2 -1.3253180096282327 0.39262035168636494 1.0 ['nc|ENSG00000176049|Q96AA8-2|JAKMIP2', 'nc|ENSG00000176049|Q96AA8|JAKMIP2', 'ENSG00000176049|ENST00000616793|JAKMIP2', 'nc|ENSG00000176049|Q96AA8-4|JAKMIP2'] 116503 12476 TTRKDIYTE True NCI_RA007_Epitope_Rep5 1125.56660274801 1125.56494490379 54.647 3 -1.3253194819286152 0.39262035168636494 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|7|1|sense'] 35556 5045 GSVPSIRRNFH True PC9_epitope_Rep3 1268.67380221156 1268.67214490379 24.493 3 -1.3253656734908528 0.39262079484992973 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 62702 22869 LLLLTEQWKWL True PC9_epitope_Rep1 1441.83332254473 1441.8322299358601 92.758 2 -1.3253839136311385 0.39262079484992973 1.0 ['ENSG00000120451|ENST00000265909|SNX19', 'ENST00000527451.1_1_11:130773148-130776010:-|nuORF', 'ENST00000526579.5_1_11:130748389-130775881:-|nuORF', 'ENST00000580193.1_1_18:14630000-14630792:-|nuORF', 'ENST00000444901.1_1_21:14899938-14900730:+|nuORF'] 53771 8589 KSVPPKPA True NCI_RA007_Epitope_Rep4 822.49633836022 822.49524993586 39.821 2 -1.3254618776703015 0.39262079484992973 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 37159 20579 GVQNITAA True PC9_epitope_Rep6 772.40791727864 772.4073649679301 91.886 1 -1.325470790331253 0.39262079484992973 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 136184 8108 WRRRRRHQRSQ True NCI_RA007_Epitope_Rep1 1620.90463904844 1620.9035499358602 35.537 2 -1.3254757457657598 0.39262079484992973 1.0 ['ENST00000439096.2_1_19:47734314-47734437:-|nuORF'] 69989 6596 LVLSTLSG True PC9_epitope_Rep6 788.4643695256 788.46326993586 34.078 2 -1.3255208445093167 0.3926280896447359 1.0 ['ENSG00000120158|ENST00000381750|RCL1', 'ENST00000442869.5_1_9:4793091-4833155:+|nuORF'] 27239 21750 FLPHHIMVKIF True PC9_epitope_Rep4 1380.7740338468 1380.77239490379 91.856 3 -1.3255684909855514 0.3926473944008743 1.0 ['ENSG00000178974|ENST00000313833|FBXO34'] 57976 8622 LEGTYLDK True H1975_Epitope_Rep1 937.47566248529 937.47456993586 38.091 2 -1.3255803817588918 0.39265468870099923 1.0 ['ENSG00000113504|ENST00000264930|SLC12A7'] 91162 639 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 3.396 3 -1.325651180795098 0.3926645609905485 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 70020 10428 LVMFGIVRYTK True PC9_epitope_Rep5 1325.7529640490495 1325.75131490379 45.098 3 -1.3256628567156934 0.3926645609905485 1.0 ['ENSG00000116329|ENST00000234961|OPRD1'] 123920 10018 VGRTENTI True NCI_RA007_Epitope_Rep3 888.46649478392 888.46538993586 46.497 2 -1.3256633568545673 0.3926645609905485 1.0 ['ENSG00000142867|ENST00000648566|BCL10'] 2141 4361 AELPFPPCCP True PC9_epitope_Rep4 1072.4721744113199 1072.4710699358602 23.217 2 -1.3257104300703255 0.39267185473411154 1.0 ['ENST00000439955.1_1_2:118593974-118594413:+|nuORF'] 56576 8194 LDGTLVSGGGR True NCI_RA007_Epitope_Rep2 1030.5407223533398 1030.5396299358601 36.508 2 -1.3257709520141154 0.39269115757364687 1.0 ['EML2|p.R304L|1|0.09|ENSG00000125746|chr19:45621568-45621568|C/A|missense_variant'] 96626 11989 SAHSHRALYSW True NCI_RA007_Epitope_Rep4 1313.62651766597 1313.6254299358602 53.121 2 -1.3258505071355333 0.39270360496673634 1.0 ['OTOA|p.Q228H|1|0.16|ENSG00000155719|chr16:21691632-21691632|G/C|missense_variant'] 4992 11845 ALHLHLIV True PC9_epitope_Rep5 914.57017200682 914.5690699358599 50.561 2 -1.3258519113497969 0.39270360496673634 1.0 ['ENSG00000204347|ENST00000375366|BTBD17'] 127750 14520 VPAYALKLL True NCI_RA007_Epitope_Rep3 986.6164534929 986.61534993586 64.418 2 -1.3258544437914304 0.39270360496673634 1.0 ['ENSG00000168038|ENST00000301831|ULK4'] 36073 8253 GVADAVWQTQ True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 39.207 2 -1.3258693018930774 0.39270360496673634 1.0 ['nc|ENSG00000112494|Q86WB7-2|UNC93A', 'ENSG00000112494|ENST00000230256|UNC93A'] 101415 13917 SLKNQDHLL True PC9_epitope_Rep5 1066.57710786206 1066.5760099358602 58.553 2 -1.3258794681506396 0.39270360496673634 1.0 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR', 'RICTOR|p.L717Qfs*8|1|0.15|ENSG00000164327|chr5:38959219-38959223|GGAAA/-|frameshift_variant'] 61359 18960 LISRRSRHRA True NCI_RA007_Epitope_Rep3 1250.74321918406 1250.74212993586 82.862 2 -1.3259716198479212 0.39272290603422394 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F'] 16595 5986 EENFLWMPAL True PC9_epitope_Rep2 1248.58489566444 1248.58378993586 28.412 2 -1.32607465020573 0.39273749054360746 1.0 ['ENST00000360317.7_1_17:38073357-38073465:-|nuORF'] 20128 14091 EMVSQLQR True H1975_Epitope_Rep1 989.49641501321 989.4958649679301 59.368 1 -1.3260762255749154 0.39273749054360746 1.0 ['ENSG00000113739|ENST00000265087|STC2'] 60739 14016 LHRLLLLFLV True PC9_epitope_Rep3 1235.81179925451 1235.8101449037902 58.994 3 -1.3261366851189758 0.39276879848219215 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 60014 15162 LGKFGKGL True PC9_epitope_Rep1 818.5014237406599 818.50032993586 63.142 2 -1.3261568059520363 0.392776090010687 1.0 ['ENST00000472291.1_1_22:39928247-39928743:-|nuORF'] 25577 17086 FEKYQRLLEKK True NCI_RA007_Epitope_Rep1 1480.8401988303197 1480.83910993586 70.592 2 -1.3261978483602186 0.3927812398688808 1.0 ['ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'ENST00000532108.1_1_11:4623360-4626734:-|nuORF'] 24733 12146 FAPPDIAP True PC9_epitope_Rep2 826.4225047136199 826.42140993586 52.029 2 -1.3262120786021039 0.3927812398688808 1.0 ['ENST00000517412.1_1_5:67522458-67569396:+|nuORF', 'ENSG00000145675|ENST00000521381|PIK3R1', 'nc|ENSG00000145675|P27986-4|PIK3R1'] 47182 12282 ITYLEKGL True PC9_epitope_Rep1 935.53278343859 935.53168993586 52.096 2 -1.3262775560084854 0.3927812398688808 1.0 ['AKAP12|p.C578Y|1|0.43|ENSG00000131016|chr6:151350124-151350124|G/A|missense_variant'] 95714 17750 RYFVLGTV True PC9_epitope_Rep2 953.5334521449298 953.53234993586 73.557 2 -1.3263288361822867 0.3927812398688808 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19'] 100006 13611 SIPVYCCSLRG True PC9_epitope_Rep5 1196.5682000544798 1196.5665449037901 57.377 3 -1.3265303066837095 0.3928005379184477 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|258|1|anti-sense'] 45037 4648 IPGKIPLIMIK True H1975_Epitope_Rep1 1221.7882869286098 1221.7866449037901 22.913 3 -1.3265558594994995 0.3928078285405535 1.0 ['ENST00000510832.5_1_4:189458328-189458415:+|nuORF'] 33087 13632 GIPANRIVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 64.204 2 -1.3266131495996891 0.3928104025838366 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 25634 10500 FENYEMNSFE True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 45.278 2 -1.326618547207059 0.3928104025838366 1.0 ['KCNH1|p.T86I|1|0.22|ENSG00000143473|chr1:211103549-211103549|G/A|missense_variant', 'KCNH1|p.L211Yfs*15|1|0.23|ENSG00000143473|chr1:211019185-211019185|G/-|frameshift_variant', 'KCNH1|p.D402Tfs*21|1|0.21|ENSG00000143473|chr1:210919898-210919898|C/-|frameshift_variant', 'KCNH1|p.D734Gfs*22|1|0.32|ENSG00000143473|chr1:210684052-210684053|-/G|frameshift_variant', 'nc|ENSG00000143473|O95259-2|KCNH1', 'ENSG00000143473|ENST00000271751|KCNH1'] 135888 21583 WPLFLILKFSA True PC9_epitope_Rep6 1333.77983041989 1333.77817490379 95.895 3 -1.3266841506040923 0.3928129765034999 1.0 ['ENST00000443527.6_2_11:45902893-45903094:+|nuORF'] 124632 9166 VGWPCLGPIS True H1975_Epitope_Rep2 1027.51608782863 1027.51498993586 40.209 2 -1.3267057792995876 0.3928129765034999 1.0 ['ENSG00000234409|ENST00000439765|CCDC188'] 5295 8247 ALQERCLCLWR True NCI_RA007_Epitope_Rep1 1389.7009455595298 1389.6998499358601 36.078 2 -1.3267883570374557 0.39283227278184657 1.0 ['ENST00000539976.1_1_16:89981432-89981549:+|nuORF'] 121689 11514 VFLADGKE True PC9_epitope_Rep3 877.4545331178899 877.45342993586 49.292 2 -1.3268113453711565 0.3928348460836575 1.0 ['DCDC1|p.V715Wfs*20|1|0.2|ENSG00000170959|chr11:30894319-30894319|C/-|frameshift_variant', 'DCDC1|p.M747Ifs*23|1|0.21|ENSG00000170959|chr11:30892971-30892972|-/A|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.K188Sfs*8|1|0.14|ENSG00000170959|chr11:30920827-30920827|T/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8-2|DCDC1', 'nc|ENSG00000170959|M0R2J8-3|DCDC1'] 50089 9966 KKHQARELD True PC9_epitope_Rep3 1123.6098049726697 1123.60816490379 43.292 3 -1.3268221764687451 0.3928348460836575 1.0 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23', 'ENST00000482948.5_1_5:137536747-137548896:-|nuORF'] 76214 24560 NNRLYHKV True H1975_Epitope_Rep2 1042.5672118846999 1042.5661099358601 101.02 2 -1.3268820882989105 0.3928494249285663 1.0 ['nc|ENSG00000204116|Q5VXU3-2|CHIC1'] 69467 11110 LVAEKQLTK True H1975_Epitope_Rep3 1028.62299542532 1028.62188993586 47.829 2 -1.326883134716856 0.3928494249285663 1.0 ['ENST00000599493.1_1_18:34647308-34664196:+|nuORF', 'nc|ENSG00000150477|Q86T90-3|KIAA1328', 'ENST00000590617.5_1_18:34415331-34802187:+|nuORF'] 59898 6221 LGGKQRAA True PC9_epitope_Rep3 799.4664352142698 799.46532993586 28.968 2 -1.3269357976558491 0.39286871961102104 1.0 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1'] 64189 11167 LPGIHVSA True PC9_epitope_Rep3 792.4493881678 792.44828993586 47.955 2 -1.3269632053501177 0.39288586897801897 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 101015 10190 SLGAARPLP True H1975_Epitope_Rep3 880.5130510535199 880.51194993586 44.241 2 -1.3270200377055084 0.39288586897801897 1.0 ['ENST00000487192.1_1_2:242162779-242163565:+|nuORF'] 102192 22143 SLRWRDQIYRR True PC9_epitope_Rep3 1547.84332714815 1547.8422299358601 90.461 2 -1.3270302942992782 0.39288586897801897 1.0 ['ENST00000285279.9_1_7:55540109-55540292:-|nuORF'] 110673 5367 TGAKVERP True PC9_epitope_Rep4 856.4766655447999 856.47556993586 27.365 2 -1.327046383485758 0.39288586897801897 1.0 ['chr12:56315242-56315878|455|18.27|0.0|20.8|-|0|CNPY2,None|1'] 23527 7929 EVVQSQRV True PC9_epitope_Rep4 943.5086939490699 943.50758993586 37.931 2 -1.3271183176105035 0.39290044537280466 1.0 ['nc|ENSG00000093009|O75419-2|CDC45', 'ENSG00000093009|ENST00000263201|CDC45', 'nc|ENSG00000093009|O75419-3|CDC45'] 82078 22359 PMKRCFKR True NCI_RA007_Epitope_Rep4 1064.5735602184398 1064.57246993586 97.008 2 -1.3271193804922616 0.39290044537280466 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF', 'SUPT20H|p.R270Kfs*11|1|0.21|ENSG00000102710|chr13:37031794-37031795|-/T|frameshift_variant', 'SUPT20H|p.Q639Lfs*24|1|0.05|ENSG00000102710|chr13:37017321-37017322|-/TTTATTAACAATAGTA|frameshift_variant', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H'] 87266 13032 QPNLKYTIKCV True PC9_epitope_Rep5 1305.71149315989 1305.70984490379 55.131 3 -1.3271834505905558 0.3929077333077237 1.0 ['nc|ENSG00000108100|Q8ND76-3|CCNY', 'nc|ENSG00000108100|Q8ND76-2|CCNY', 'ENSG00000108100|ENST00000374704|CCNY'] 135317 20829 WGAQGFTS True NCI_RA007_Epitope_Rep5 852.37661715036 852.37552993586 87.11 2 -1.327274680658761 0.39292702543725916 1.0 ['TRIM51|p.A335G|1|0.19|ENSG00000124900|chr11:55891277-55891277|C/G|missense_variant'] 120293 8578 VEDLVFWV True PC9_epitope_Rep5 1005.5171333744499 1005.51602993586 37.937 2 -1.3273172135630658 0.39292744994478324 1.0 ['chr7:65940167-65948671|129|14.83|0.51|4.88|+|2|TE_info:AluJr,AluJr_dup31264,Alu,SINE,donor,-,65940017,65940167|None,VKORC1L1|2'] 27151 20518 FLKVDVSRIS True PC9_epitope_Rep2 1162.6710082468999 1162.66990993586 84.353 2 -1.3273214410498442 0.39292744994478324 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant', 'RYR2|p.N3207Kfs*49|1|0.52|ENSG00000198626|chr1:237706985-237706986|-/T|frameshift_variant', 'RYR2|p.K1840Sfs*6|1|0.05|ENSG00000198626|chr1:237614645-237614645|G/-|frameshift_variant', 'RYR2|p.A2213Lfs*22|1|0.25|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant', 'RYR2|p.L1658Sfs*49|1|0.23|ENSG00000198626|chr1:237614100-237614100|C/-|frameshift_variant'] 141649 8549 YTSNDSYIV True PC9_epitope_Rep4 1060.47130538084 1060.47020993586 40.363 2 -1.3273780269555517 0.39292744994478324 1.0 ['ENSG00000148513|ENST00000361713|ANKRD30A', 'ANKRD30A|p.E356Kfs*41|1|0.19|ENSG00000148513|chr10:37141963-37141963|G/-|frameshift_variant', 'ANKRD30A|p.F642Sfs*18|1|0.28|ENSG00000148513|chr10:37162670-37162670|C/-|frameshift_variant'] 124610 9839 VGVYAAGA True NCI_RA007_Epitope_Rep5 706.3649898374998 706.36444496793 44.491 1 -1.327397981332331 0.39292744994478324 1.0 ['ENSG00000173227|ENST00000527043|SYT12'] 56939 19592 LDQLRKTV True PC9_epitope_Rep6 971.57637958607 971.57528993586 88.024 2 -1.3273981112772961 0.39292744994478324 1.0 ['ENST00000490762.5_1_16:240794-277276:-|nuORF', 'nc|ENSG00000007392|Q9NQ29-2|LUC7L', 'nc|ENSG00000007392|Q9NQ29-3|LUC7L', 'ENSG00000007392|ENST00000293872|LUC7L'] 78137 6316 NWTQVTSFVL True PC9_epitope_Rep2 1193.6080736371698 1193.60641490379 29.692 3 -1.327474858334614 0.39294244733841444 1.0 ['ENSG00000181499|ENST00000321252|OR6T1'] 113790 12330 TMYFQQYWRDK True NCI_RA007_Epitope_Rep1 1564.71328406504 1564.7121899358601 51.932 2 -1.327476680527476 0.39294244733841444 1.0 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3', 'GABRB3|p.H132Afs*15|1|0.23|ENSG00000166206|chr15:26621382-26621383|-/A|frameshift_variant'] 19671 13322 ELREYYRL True PC9_epitope_Rep5 1140.5927579262 1140.59110490379 56.256 3 -1.3275058618573885 0.39294244733841444 1.0 ['ENSG00000126216|ENST00000261965|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-3|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-2|TUBGCP3'] 139038 21001 YLALKNIS True H1975_Epitope_Rep2 920.53311779176 920.53202993586 86.931 2 -1.3275476824685521 0.39294244733841444 1.0 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 52796 15593 KNPHRCTP True NCI_RA007_Epitope_Rep5 951.47086897171 951.46976993586 66.685 2 -1.3275491805876065 0.39294244733841444 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'TRPM6|p.P1293Qfs*21|1|0.08|ENSG00000119121|chr9:74762793-74762793|G/-|frameshift_variant', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6', 'nc|ENSG00000119121|Q9BX84-6|TRPM6', 'nc|ENSG00000119121|Q9BX84-5|TRPM6', 'nc|ENSG00000119121|Q9BX84-7|TRPM6'] 37137 9543 GVQASVQPT True PC9_epitope_Rep5 885.4555957470499 885.45448993586 41.665 2 -1.3275798267248902 0.39294244733841444 1.0 ['ENST00000264938.7_2_5:475749-476766:-|nuORF'] 38163 8578 HDIAQQAFK True PC9_epitope_Rep4 1056.53524305008 1056.5341499358601 40.475 2 -1.32761214719221 0.39294244733841444 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 101711 19407 SLMVARSIL True PC9_epitope_Rep4 988.5739370579199 988.57282993586 82.759 2 -1.3276634531881946 0.3929497335445773 1.0 ['KDM4B-AKAP8L|1|fusion', 'nc|ENSG00000011243|Q9ULX6-2|AKAP8L', 'ENSG00000011243|ENST00000397410|AKAP8L'] 25259 16247 FDLGGDTF True PC9_epitope_Rep1 870.3759484440201 870.37484993586 67.312 2 -1.3277956512254905 0.39298102428075904 1.0 ['HSPA8|p.G203D|1|0.29|ENSG00000109971|chr11:123059985-123059985|C/T|missense_variant'] 8711 14774 AVAQFKKY True PC9_epitope_Rep5 953.5334521449299 953.53234993586 61.828 2 -1.3278917375501047 0.3929865828192881 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'TRAPPC11|p.R484Lfs*4|1|0.19|ENSG00000168538|chr4:183684720-183684721|-/TATC|frameshift_variant'] 25206 7910 FDDPLPIPLR True H1975_Epitope_Rep1 1181.6444591458899 1181.6433699358602 35.377 2 -1.3278919492302015 0.3929865828192881 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 28435 11733 FSDFHDLCM True H1975_Epitope_Rep2 1113.42595249489 1113.42484993586 50.204 2 -1.3279235945794314 0.3929865828192881 1.0 ['ENST00000309964.8_1_4:56294512-56294707:-|nuORF'] 17030 9217 EGEASHPPKPQ True H1975_Epitope_Rep1 1175.55710069347 1175.5560099358602 40.362 2 -1.3279471839163821 0.3929865828192881 1.0 ['ENST00000576329.1_1_17:4719175-4720106:+|nuORF'] 91158 190 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 1.0274 3 -1.3279515137866214 0.3929865828192881 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 44245 18902 IKRLRRLYCN True NCI_RA007_Epitope_Rep3 1333.77649345829 1333.7753899358602 82.639 2 -1.3280871687046554 0.3929865828192881 1.0 ['nc|ENSG00000075388|P08620-2|FGF4', 'ENSG00000075388|ENST00000168712|FGF4'] 136776 15450 WYQVGLDLQPW True H1975_Epitope_Rep1 1403.6873865870298 1403.68628993586 64.699 2 -1.3281112321353632 0.3929865828192881 1.0 ['ENSG00000183396|ENST00000330862|TMEM89'] 69122 20505 LTRKRRRSRPW True PC9_epitope_Rep5 1510.9069304642198 1510.90582993586 83.913 2 -1.3281267223317443 0.3929865828192881 1.0 ['ENST00000370995.6_2_1:67891962-67895727:-|nuORF'] 34307 22735 GPALKASSS True PC9_epitope_Rep5 816.43413202648 816.4335849679301 92.455 1 -1.3281765290572323 0.3929865828192881 1.0 ['ENSG00000241973|ENST00000255882|PI4KA'] 92501 13642 RLWWYHWICWL True H1975_Epitope_Rep1 1660.81254461384 1660.81144993586 57.606 2 -1.3282625348441452 0.3929870036361018 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 56982 6562 LDREEDAV True PC9_epitope_Rep5 945.4403396057298 945.43924993586 30.211 2 -1.328265655494016 0.3929870036361018 1.0 ['PCDHGA4|p.E236D|1|0.27|ENSG00000262576|chr5:141355815-141355815|G/T|missense_variant'] 84418 6609 QADRLFED True PC9_epitope_Rep1 992.4563240230399 992.45522993586 30.225 2 -1.3282854877941803 0.3929870036361018 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 41783 20118 IAQYLKGLEV True H1975_Epitope_Rep1 1132.6492101731599 1132.64810993586 83.716 2 -1.3282920736622132 0.3929870036361018 1.0 ['ENSG00000171823|ENST00000339235|FBXL14'] 58520 9799 LEQFRVAHED True NCI_RA007_Epitope_Rep4 1242.59929985862 1242.59820993586 44.54 2 -1.3283296643514322 0.3929870036361018 1.0 ['ENSG00000164610|ENST00000297157|RP9'] 80390 19434 PGHRPRPRGPY True NCI_RA007_Epitope_Rep5 1288.6901209820398 1288.68847490379 81.64 3 -1.3284050449006601 0.3930062881006096 1.0 ['ENST00000333554.4_9:40332483-40332909:+|nuORF'] 118799 14780 VAAERKSL True PC9_epitope_Rep5 872.5079656730799 872.50686993586 61.85 2 -1.3286034536926468 0.39306157224628896 1.0 ['ENST00000346416.6_1_20:31984877-31989364:-|nuORF'] 83220 6016 PSVPGPGLGQG True PC9_epitope_Rep4 964.4977949121999 964.49668993586 30.119 2 -1.3286310211918413 0.39306670506497715 1.0 ['ENST00000534025.5_1_11:8986022-8986145:-|nuORF'] 110463 13626 TFENYYRKQRR True NCI_RA007_Epitope_Rep2 1559.7957082493897 1559.79460993586 57.642 2 -1.3286857085725194 0.39306670506497715 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 130598 19264 VSSIQDALP True PC9_epitope_Rep3 928.4865615221598 928.48546993586 79.32 2 -1.3286952098618967 0.39306670506497715 1.0 ['ENST00000569758.1_1_15:75646945-75647372:+|nuORF'] 91870 24486 RKKPILLVH True NCI_RA007_Epitope_Rep1 1102.7338832869798 1102.7327899358602 101.45 2 -1.328709762574429 0.39306670506497715 1.0 ['TDP1|p.G431Lfs*6|1|0.13|ENSG00000042088|chr14:89989062-89989071|CAGGAAAAAG/-|frameshift_variant', 'ENSG00000042088|ENST00000335725|TDP1'] 11186 24536 DDSTPCIS True H1975_Epitope_Rep1 836.322198619 836.32110993586 101.68 2 -1.3289048069332159 0.39312198516883057 1.0 ['ENSG00000135164|ENST00000331242|DMTF1', 'nc|ENSG00000135164|Q9Y222-2|DMTF1', 'nc|ENSG00000135164|Q9Y222-3|DMTF1'] 45130 19535 IPMMYPAS True PC9_epitope_Rep3 908.41359690604 908.41248993586 80.373 2 -1.3289683902123914 0.39313183187146783 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 88769 19090 QTPRRLKRRRR True PC9_epitope_Rep1 1521.9552776389698 1521.9536249037901 78.22 3 -1.3289772483698756 0.39313183187146783 1.0 ['ENST00000321448.12_1_11:74648098-74660104:-|nuORF', 'ENST00000530562.5_1_11:74648079-74660104:-|nuORF'] 33199 13773 GIYTGLSAGL True PC9_epitope_Rep3 950.50729696674 950.50618993586 58.058 2 -1.329002087658868 0.39313183187146783 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11'] 142934 18089 YYYRDRDWRWV True NCI_RA007_Epitope_Rep2 1676.7848092125198 1676.78370993586 75.115 2 -1.32902338098229 0.3931463950181779 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 57985 15498 LEHDLDHTV True PC9_epitope_Rep2 1077.50908787189 1077.50798993586 64.886 2 -1.3290352209637262 0.3931463950181779 1.0 ['PXDNL|p.A820G|1|0.33|ENSG00000147485|chr8:51409165-51409165|G/C|missense_variant', 'PXDNL|p.A820E|1|0.49|ENSG00000147485|chr8:51409165-51409165|G/T|missense_variant', 'nc|ENSG00000147485|A1KZ92-3|PXDNL', 'PXDNL|p.V1135Wfs*28|1|0.11|ENSG00000147485|chr8:51408221-51408221|C/-|frameshift_variant', 'PXDNL|p.Q1244Pfs*16|1|0.13|ENSG00000147485|chr8:51372043-51372044|-/G|frameshift_variant', 'nc|ENSG00000147485|A1KZ92-2|PXDNL', 'ENSG00000147485|ENST00000356297|PXDNL'] 58643 21449 LERELKQLYLE True PC9_epitope_Rep1 1432.7925799315597 1432.79148993586 87.343 2 -1.3290954378858535 0.3931536763294298 1.0 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 62543 21977 LLKGKRKVRNK True PC9_epitope_Rep5 1338.8935718158598 1338.8924699358602 89.565 2 -1.3291325704610446 0.39315624025148177 1.0 ['ENST00000505030.5_1_5:87962937-87963072:-|nuORF'] 110154 11529 TENVWDESW True H1975_Epitope_Rep2 1164.4723680099999 1164.4712699358602 49.406 2 -1.329252085269248 0.39315624025148177 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3'] 15279 3986 EAETITTH True NCI_RA007_Epitope_Rep2 900.4188758851601 900.41776993586 20.141 2 -1.3292916291505938 0.3931588040504871 1.0 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2'] 85548 6233 QGEGEEAMKDM True NCI_RA007_Epitope_Rep3 1223.47983854255 1223.4781949037902 31.521 3 -1.3292962723762793 0.3931588040504871 1.0 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.G1552Hfs*13|1|0.14|ENSG00000151320|chr14:32822467-32822468|GG/-|frameshift_variant', 'AKAP6|p.P544Hfs*88|1|0.88|ENSG00000151320|chr14:32546283-32546283|C/-|frameshift_variant', 'nc|ENSG00000151320|Q13023-2|AKAP6', 'AKAP6|p.D1399Tfs*11|1|0.37|ENSG00000151320|chr14:32822007-32822007|G/-|frameshift_variant', 'ENST00000556037.1_1_14:32902699-32903038:+|nuORF', 'ENST00000554449.1_1_14:32902699-32907897:+|nuORF'] 42049 6642 IDILVFMVSDS True PC9_epitope_Rep4 1237.62642612325 1237.62532993586 32.716 2 -1.3293346355404676 0.3931660847760621 1.0 ['CACNA1G|p.S1364F|1|0.19|ENSG00000006283|chr17:50603121-50603121|C/T|missense_variant'] 116505 6950 TTRPFFMK True NCI_RA007_Epitope_Rep2 1026.5320722459398 1026.5309699358602 31.653 2 -1.3293594749575401 0.3931733653269346 1.0 ['ENSG00000137869|ENST00000396402|CYP19A1', 'nc|ENSG00000137869|P11511-2|CYP19A1', 'CYP19A1|p.Y241*|1|0.68|ENSG00000137869|chr15:51218561-51218561|G/-|frameshift_variant'] 36199 18637 GVAYVRPLAL True PC9_epitope_Rep4 1057.6284151589298 1057.62730993586 79.765 2 -1.3294027386298812 0.3932166380727286 1.0 ['ENST00000535678.1_1_2:223725777-223773458:+|nuORF', 'ENST00000392066.7_1_2:223725777-223773468:+|nuORF', 'ENST00000357430.7_1_2:223725777-223765478:+|nuORF'] 79460 7428 PAVPSAPAAP True PC9_epitope_Rep6 876.4705175351999 876.46942993586 37.797 2 -1.3294652158673248 0.39324791246760726 1.0 ['ENSG00000266265|ENST00000583337|KLF14'] 116842 15029 TVEPRRWKFHR True NCI_RA007_Epitope_Rep1 1510.82694880802 1510.82584993586 62.526 2 -1.3295051205138386 0.39327446793195286 1.0 ['ANK1|p.R1139W|1|0.31|ENSG00000029534|chr8:41694015-41694015|G/A|missense_variant'] 96991 14085 SCCAGSST True NCI_RA007_Epitope_Rep4 714.23127543962 714.2307249679301 61.46 1 -1.3295738783270663 0.39327446793195286 1.0 ['ENSG00000132464|ENST00000396073|ENAM'] 68727 20866 LTKTKKPIVV True PC9_epitope_Rep3 1125.7485302916098 1125.74742993586 85.533 2 -1.329784199272614 0.3933370123326455 1.0 ['ARHGAP35|p.A189T|1|0.42|ENSG00000160007|chr19:46919240-46919240|G/A|missense_variant'] 4009 13468 AHEQIALL True PC9_epitope_Rep2 893.4970666362099 893.49596993586 57.083 2 -1.329808969962547 0.3933370123326455 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'nc|ENSG00000164308|Q6P179-2|ERAP2', 'nc|ENSG00000164308|Q6P179-4|ERAP2'] 12586 8893 DKYRDQYNWFF True NCI_RA007_Epitope_Rep4 1580.7048275563195 1580.70372993586 41.032 2 -1.3298633473420236 0.3933395714868399 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 58449 11945 LEPLNPSRL True PC9_epitope_Rep6 1037.58694426977 1037.58584993586 57.197 2 -1.3298735890951487 0.3933395714868399 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant'] 18485 8726 EKENFIGRQWE True NCI_RA007_Epitope_Rep2 1434.6891774921799 1434.68808993586 38.587 2 -1.3299980198766268 0.3933421305182342 1.0 ['nc|ENSG00000108255|P05813-2|CRYBA1', 'ENSG00000108255|ENST00000225387|CRYBA1'] 97678 4692 SEHWKPELEE True NCI_RA007_Epitope_Rep2 1282.5829810881398 1282.58134490379 22.877 3 -1.3300087792091286 0.3933421305182342 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 93853 22603 RRDWKTLRRRT True PC9_epitope_Rep6 1542.8967597033397 1542.89512490379 99.984 3 -1.3300477645054027 0.3933425298386613 1.0 ['ENST00000475306.1_1_1:24410803-24434643:-|nuORF', 'nc|ENSG00000142661|Q5VTT5-2|MYOM3', 'ENSG00000142661|ENST00000374434|MYOM3'] 119769 11488 VAYSNLAV True PC9_epitope_Rep3 835.4439684341899 835.44286993586 49.191 2 -1.3300486512094947 0.3933425298386613 1.0 ['ENSG00000125931|ENST00000651998|CITED1', 'nc|ENSG00000125931|Q99966-2|CITED1'] 113051 6017 TLNLPTEPSK True NCI_RA007_Epitope_Rep1 1098.5920892198599 1098.59098993586 27.449 2 -1.33007347097031 0.3933425298386613 1.0 ['ENST00000536684.2_1_11:10530310-10530400:-|nuORF'] 67735 15026 LSYEELLQR True PC9_epitope_Rep5 1149.6029882567298 1149.60188993586 62.801 2 -1.3300822263043734 0.3933425298386613 1.0 ['nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 20805 5133 EQIFREGPV True NCI_RA007_Epitope_Rep1 1073.5505587610498 1073.54946993586 24.048 2 -1.330102281381971 0.3933425298386613 1.0 ['nc|ENSG00000065675|Q04759-3|PRKCQ', 'nc|ENSG00000065675|Q04759-2|PRKCQ', 'ENSG00000065675|ENST00000263125|PRKCQ'] 89902 7012 RCKIYFLLQHN True NCI_RA007_Epitope_Rep3 1433.76017468781 1433.75851490379 34.695 3 -1.3301372774706506 0.3933498068757047 1.0 ['ENST00000358517.6_1_6:151162047-151162251:+|nuORF'] 22770 12945 ETVVEVPQV True PC9_epitope_Rep6 998.5284263341399 998.5273299358599 61.339 2 -1.3301640654929674 0.3933570837381698 1.0 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF', 'ENST00000480327.1_1_9:35060776-35061606:-|nuORF'] 67585 8776 LSVADQDKVF True H1975_Epitope_Rep1 1120.5764391557198 1120.57534993586 38.688 2 -1.3304715778944016 0.3934316112703763 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 65578 14164 LRSPRRSLYKL True H1975_Epitope_Rep3 1387.84120188983 1387.84010993586 59.814 2 -1.330479175756015 0.3934316112703763 1.0 ['nc|ENSG00000129197|Q86UA6-6|RPAIN', 'nc|ENSG00000129197|Q86UA6-5|RPAIN', 'nc|ENSG00000129197|Q86UA6-7|RPAIN', 'ENST00000572174.5_1_17:5323530-5326157:+|nuORF', 'ENST00000575711.1_1_17:5323530-5324864:+|nuORF', 'nc|ENSG00000129197|Q86UA6-3|RPAIN', 'nc|ENSG00000129197|Q86UA6-4|RPAIN', 'nc|ENSG00000129197|Q86UA6-9|RPAIN', 'nc|ENSG00000129197|Q86UA6-2|RPAIN', 'ENST00000571043.5_1_17:5323428-5329403:+|nuORF', 'ENSG00000129197|ENST00000381209|RPAIN', 'nc|ENSG00000129197|Q86UA6-8|RPAIN'] 5078 13529 ALLELWDERH True PC9_epitope_Rep1 1280.65133543148 1280.6496749037901 56.894 3 -1.3305504788867988 0.3934508816120907 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.D1231Tfs*9|1|0.27|ENSG00000163554|chr1:158648532-158648532|C/-|frameshift_variant', 'SPTA1|p.D1280Gfs*3|1|0.07|ENSG00000163554|chr1:158647598-158647599|-/T|frameshift_variant', 'SPTA1|p.T1344Pfs*5|1|0.22|ENSG00000163554|chr1:158645353-158645353|G/-|frameshift_variant', 'SPTA1|p.D1530Rfs*4|1|0.28|ENSG00000163554|chr1:158642831-158642832|-/T|frameshift_variant', 'SPTA1|p.K1686Lfs*14|1|0.06|ENSG00000163554|chr1:158638166-158638167|-/GAAGATAG|frameshift_variant', 'SPTA1|p.W1920*|1|0.3|ENSG00000163554|chr1:158626912-158626912|C/-|frameshift_variant', 'SPTA1|p.T573Lfs*6|1|0.26|ENSG00000163554|chr1:158669525-158669525|G/-|frameshift_variant', 'SPTA1|p.Q902Sfs*21|1|0.18|ENSG00000163554|chr1:158657578-158657578|G/-|frameshift_variant'] 136386 10254 WTQMWNRPCR True PC9_epitope_Rep2 1376.623029592 1376.6219299358602 44.774 2 -1.3306023454630158 0.3934701514915258 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 118836 10406 VAAPESRAP True PC9_epitope_Rep1 896.4715801643599 896.47048993586 44.911 2 -1.3307794365662635 0.3935373986470278 1.0 ['ENST00000519231.5_1_8:66693177-66754193:-|nuORF'] 98771 23722 SGHVSLCWRP True H1975_Epitope_Rep2 1140.5498475683999 1140.54820490379 97.747 3 -1.3307915219012965 0.3935566670264954 1.0 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 105958 18886 SSSQGLKLKK True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 79.491 2 -1.3308669136544515 0.3935712143928036 1.0 ['nc|ENSG00000141576|Q96PX1-2|RNF157', 'ENSG00000141576|ENST00000269391|RNF157'] 120832 12534 VELPDSFSP True H1975_Epitope_Rep2 989.47057710485 989.46948993586 53.306 2 -1.330895189355772 0.3935712143928036 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000416281.6_1_11:67049840-67052918:+|nuORF', 'ENST00000531390.1_1_11:67050274-67051456:+|nuORF', 'ENST00000533077.5_1_11:67049840-67050700:+|nuORF'] 43273 13024 IFRRIKMP True NCI_RA007_Epitope_Rep5 1059.6375403739899 1059.6364499358601 56.774 2 -1.3309417513338413 0.3935784878142391 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000507209.5_1_4:187118658-187122526:+|nuORF'] 139717 26104 YNNGGGGC True H1975_Epitope_Rep1 740.25478776552 740.2542349679301 108.39 1 -1.331001943970432 0.3935810405622586 1.0 ['HNRNPA1|p.G297C|1|0.32|ENSG00000135486|chr12:54283216-54283216|G/T|missense_variant'] 28246 23277 FRKKKREQ True PC9_epitope_Rep4 1118.6672602791398 1118.6661699358601 97.787 2 -1.3310242806461483 0.3935810405622586 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 85364 6682 QETVVTSEPYR True H1975_Epitope_Rep1 1307.6357449369898 1307.6346499358601 30.755 2 -1.3312689924052254 0.39362939687945986 1.0 ['ENSG00000166068|ENST00000299084|SPRED1'] 83860 15827 PVNSSPAVI True PC9_epitope_Rep6 882.4810822188999 882.47998993586 73.142 2 -1.3313086412554684 0.39362939687945986 1.0 ['CHAT|p.D328Ifs*6|1|0.09|ENSG00000070748|chr10:49627652-49627652|G/-|frameshift_variant', 'nc|ENSG00000070748|P28329-3|CHAT', 'nc|ENSG00000070748|P28329-2|CHAT', 'ENSG00000070748|ENST00000337653|CHAT'] 33847 13533 GLPEPLASRFP True PC9_epitope_Rep1 1182.6397081186199 1182.63805490379 56.91 3 -1.3313523731493182 0.39362939687945986 1.0 ['ENST00000580580.1_1_18:74694183-74696045:+|nuORF'] 120866 23562 VEMKVKIIRTI True PC9_epitope_Rep1 1328.8213779620396 1328.82028993586 95.421 2 -1.3313630628600501 0.39362939687945986 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 138243 21150 YGTAIIMYV True PC9_epitope_Rep4 1029.5205045027299 1029.51940993586 89.516 2 -1.3313711339777847 0.39362939687945986 1.0 ['ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4', 'OR2A25|p.F250L|1|0.24|ENSG00000221933|chr7:144074967-144074967|T/C|missense_variant', 'ENSG00000221933|ENST00000641663|OR2A25'] 137638 7167 YEHLRQFCLEL True H1975_Epitope_Rep3 1449.70747040861 1449.70636993586 32.542 2 -1.3314248775121642 0.3936606543221721 1.0 ['nc|ENSG00000115540|Q9Y3A3-2|MOB4', 'nc|ENSG00000115540|Q9Y3A3-3|MOB4', 'ENSG00000115540|ENST00000323303|MOB4'] 78923 23615 PAGRELLFFRR True PC9_epitope_Rep2 1360.7727879768397 1360.77227496793 96.304 1 -1.3314975816096224 0.393675197275322 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 41023 16342 HTHSYVEI True PC9_epitope_Rep4 984.4664947839199 984.46538993586 70.823 2 -1.3315183657892 0.393675197275322 1.0 ['NOSTRIN|p.K401E|1|0.08|ENSG00000163072|chr2:168860816-168860816|A/G|missense_variant'] 33626 6918 GLGFQSAQ True PC9_epitope_Rep3 806.3922672145 806.39116993586 31.622 2 -1.3317040867626537 0.39371372379718905 1.0 ['ENST00000303569.10_1_1:153930908-153931079:-|nuORF'] 19629 8125 ELQSINQKW True H1975_Epitope_Rep1 1144.58767254576 1144.58656993586 36.194 2 -1.3317137771886203 0.39371372379718905 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 112357 7063 TLAHLDREFA True NCI_RA007_Epitope_Rep2 1171.59857158263 1171.59746993586 32.096 2 -1.3317706642896168 0.39372354330803083 1.0 ['FAT2|p.P1094H|1|0.1|ENSG00000086570|chr5:151563618-151563618|G/T|missense_variant'] 33174 10992 GIVKNPSP True PC9_epitope_Rep6 810.4599528514999 810.45884993586 53.171 2 -1.3317833218496333 0.39372354330803083 1.0 ['ENSG00000173276|ENST00000310826|ZBTB21'] 32717 10963 GGVHLTTT True NCI_RA007_Epitope_Rep5 784.4079172786401 784.40682993586 48.806 2 -1.331815013740592 0.39372354330803083 1.0 ['ENSG00000169116|ENST00000307428|PARM1'] 67819 12592 LTAEEERNP True H1975_Epitope_Rep1 1057.50400249145 1057.50290993586 53.484 2 -1.3318407419646214 0.3937547966231773 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4'] 128188 12825 VPLWILMSFLC True H1975_Epitope_Rep3 1320.6974233188798 1320.6963299358601 54.551 2 -1.331858760712668 0.3937693359234477 1.0 ['ENSG00000269556|ENST00000600449|TMEM185A', 'ENSG00000226479|ENST00000426077|TMEM185B'] 17965 6782 EIDECVRN True H1975_Epitope_Rep3 976.42839502304 976.42784496793 31.041 1 -1.3319029500547737 0.3937693359234477 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 22899 10468 EVDYKFMKPTQ True H1975_Epitope_Rep1 1384.6696879175597 1384.6685899358602 45.22 2 -1.3319412120774239 0.3937766053120691 1.0 ['ENST00000457388.1_1_10:37626656-37627235:+|nuORF'] 75330 13641 NIPLEELQRNL True NCI_RA007_Epitope_Rep2 1337.7303140281697 1337.7292099358601 57.699 2 -1.3320045713890427 0.3937864217367323 1.0 ['ENSG00000174125|ENST00000308979|TLR1', 'ENSG00000174130|ENST00000508254|TLR6'] 49594 10278 KFYMWFYFFIK True NCI_RA007_Epitope_Rep2 1618.8046652687397 1618.8035699358602 44.569 2 -1.3321140336951336 0.3937864217367323 1.0 ['ENST00000498257.5_1_6:129811877-129812174:+|nuORF'] 139701 10119 YNKQNLRRWVD True NCI_RA007_Epitope_Rep1 1490.7742445288197 1490.7731499358601 43.371 2 -1.3321281883952498 0.3937864217367323 1.0 ['PTPN21|p.Q74L|1|0.21|ENSG00000070778|chr14:88517221-88517221|T/A|missense_variant'] 20316 9758 ENTRRVYK True NCI_RA007_Epitope_Rep5 1064.57269118796 1064.5715899358602 44.179 2 -1.3321727767568279 0.39378896882494 1.0 ['ENSG00000169902|ENST00000304842|TPST1'] 132643 26770 VVFSILRRFI True PC9_epitope_Rep5 1248.7706627185198 1248.76956993586 109.24 2 -1.332204200416148 0.39378896882494 1.0 ['ENST00000366647.8_1_1:231386833-231396301:+|nuORF'] 86967 16585 QLWQGQGPL True PC9_epitope_Rep4 1025.5294293936497 1025.52832993586 71.77 2 -1.3322577913356826 0.3938035059111292 1.0 ['ENST00000495397.1_1_1:161695975-161696182:+|nuORF'] 19486 12102 ELPARLLTK True PC9_epitope_Rep2 1039.6389798426299 1039.6378899358601 51.86 2 -1.3322679200928214 0.3938035059111292 1.0 ['ENST00000512260.5_2_5:175603743-175612170:-|nuORF'] 139197 7670 YLEQQLEDH True H1975_Epitope_Rep3 1173.5302172392899 1173.52912993586 34.485 2 -1.3323536287909628 0.39382531023319944 1.0 ['ENSG00000103351|ENST00000576634|CLUAP1', 'nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 102685 11697 SLYQCRHDFRY True NCI_RA007_Epitope_Rep2 1486.67756726266 1486.67646993586 50.094 2 -1.3323893621907592 0.39382531023319944 1.0 ['ENST00000286298.4_1_5:149365201-149365333:+|nuORF'] 64331 13390 LPLASTSK True H1975_Epitope_Rep1 815.4752685624701 815.47472496793 56.615 1 -1.3323986376335906 0.39382531023319944 1.0 ['ENSG00000138592|ENST00000307179|USP8', 'nc|ENSG00000138592|P40818-2|USP8', 'ENST00000419830.2_1_15:50786258-50791282:+|nuORF'] 124346 19261 VGTTKGKRK True H1975_Epitope_Rep3 973.6032630402499 973.60216993586 80.761 2 -1.332482463343757 0.39382785617514116 1.0 ['nc|ENSG00000112419|O75167-5|PHACTR2', 'nc|ENSG00000112419|O75167-2|PHACTR2', 'nc|ENSG00000112419|O75167|PHACTR2', 'ENSG00000112419|ENST00000440869|PHACTR2'] 66190 10689 LSERMCHPGVR True H1975_Epitope_Rep3 1283.62269523883 1283.6215899358601 46.19 2 -1.332501377697909 0.39382785617514116 1.0 ['ENST00000526437.5_1_11:30605673-30605736:-|nuORF'] 85164 7263 QENKNLPQAV True H1975_Epitope_Rep1 1139.5934862021898 1139.5923899358602 32.947 2 -1.3325604640160142 0.3938351237291387 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 57959 16419 LEGQEIQVKAK True PC9_epitope_Rep6 1241.69795127073 1241.6968499358602 75.56 2 -1.3325953702643694 0.39383766934420333 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8'] 34160 17821 GNFEREFKN True NCI_RA007_Epitope_Rep3 1139.5359713260698 1139.5348699358601 78.142 2 -1.332602343791577 0.39383766934420333 1.0 ['nc|ENSG00000036549|Q8IYH5-3|ZZZ3', 'nc|ENSG00000036549|Q8IYH5-2|ZZZ3', 'ENSG00000036549|ENST00000370801|ZZZ3', 'ENST00000476275.5_1_1:78046613-78098535:-|nuORF', 'nc|ENSG00000036549|Q8IYH5-4|ZZZ3'] 75473 20057 NKIYVFFQHAF True PC9_epitope_Rep3 1412.72410644892 1412.72300993586 82.4 2 -1.332639624990559 0.3938569253455779 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 15492 10309 EALTLKYKL True NCI_RA007_Epitope_Rep4 1077.64339651673 1077.6422899358602 46.509 2 -1.3326943933255009 0.3938641922025608 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'ENST00000528744.5_1_11:126137442-126138699:-|nuORF'] 32468 16395 GGASKWPV True NCI_RA007_Epitope_Rep4 800.4180880395198 800.41698993586 71.065 2 -1.3327077185132754 0.39387145888530567 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 78691 10515 NYYSTLSFT True PC9_epitope_Rep4 1094.49204082542 1094.49094993586 48.168 2 -1.3328725692890917 0.39390778968567935 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 47074 13572 ITSRCRQYH True PC9_epitope_Rep1 1162.5665602617 1162.56490490379 57.06 3 -1.3329659279531887 0.39390778968567935 1.0 ['ENST00000556883.1_1_14:93650687-93651102:-|nuORF'] 82723 6645 PRARMPCSP True NCI_RA007_Epitope_Rep2 1013.48989016413 1013.4893749679301 30.458 1 -1.3329688515933775 0.39390778968567935 1.0 ['ENST00000587374.5_3_17:73845777-73851378:-|nuORF'] 15595 5286 EARENNAVYAF True H1975_Epitope_Rep3 1282.59421447818 1282.59256490379 25.416 3 -1.333041170145686 0.39390778968567935 1.0 ['ENST00000481106.5_1_X:80458072-80552723:+|nuORF', 'ENSG00000131171|ENST00000373212|SH3BGRL', 'ENST00000474113.1_1_X:80511064-80552723:+|nuORF'] 25384 11518 FEAWYLGRL True PC9_epitope_Rep3 1153.5920296502097 1153.5903749037902 49.308 3 -1.3330523832315715 0.39390778968567935 1.0 ['ENST00000525340.5_1_11:62340970-62341174:-|nuORF'] 82586 19024 PPYSVETP True PC9_epitope_Rep6 888.42289863644 888.42180993586 85.819 2 -1.3330659001314835 0.39391033325341646 1.0 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000590400.1_1_19:11303345-11305238:-|nuORF'] 97813 10178 SELIRHQRT True H1975_Epitope_Rep1 1138.62070400954 1138.6196099358601 44.089 2 -1.3330697905052875 0.39391033325341646 1.0 ['ENSG00000267041|ENST00000591344|ZNF850'] 12550 20475 DKNVRRRFRA True NCI_RA007_Epitope_Rep2 1316.75378386776 1316.75212490379 84.715 3 -1.3331381010494738 0.39391287669919206 1.0 ['ENST00000562622.5_1_16:58149118-58163019:-|nuORF', 'ENSG00000070761|ENST00000262498|CFAP20', 'ENST00000564150.1_1_16:58147931-58149427:-|nuORF'] 46384 15023 ISRWFEVERRE True PC9_epitope_Rep6 1505.77391017565 1505.77280993586 69.811 2 -1.3331544453174007 0.39391287669919206 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 4078 8744 AHLYQGLGPVV True PC9_epitope_Rep1 1152.62914343492 1152.6274949037902 38.472 3 -1.333160931010552 0.39392014192728625 1.0 ['nc|ENSG00000102145|P15976-3|GATA1', 'ENSG00000102145|ENST00000376670|GATA1'] 11436 5493 DEWTPRQQVKP True NCI_RA007_Epitope_Rep2 1382.6942628726201 1382.69260490379 25.984 3 -1.3332184320384615 0.39392740698120443 1.0 ['PRDM9|p.E93D|1|0.17|ENSG00000164256|chr5:23510005-23510005|A/T|missense_variant'] 70481 10093 LVVFPSHL True PC9_epitope_Rep5 910.5276384884999 910.52654993586 43.805 2 -1.3332833267828843 0.39393721457082237 1.0 ['ENSG00000177673|ENST00000313965|TEX44'] 3378 7091 AGHITAPDP True NCI_RA007_Epitope_Rep2 877.4293809992099 877.42828993586 32.205 2 -1.3332983009866668 0.39393721457082237 1.0 ['ENSG00000151093|ENST00000280701|OXSM', 'nc|ENSG00000151093|Q9NWU1-2|OXSM'] 107881 14547 SVVLTDRNVP True PC9_epitope_Rep6 1098.6033226099 1098.6022299358601 67.849 2 -1.3333250888800916 0.39393721457082237 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 29966 26169 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 108.3 3 -1.3333839978133204 0.3939590075512406 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 86053 8265 QHQSTHTGER True NCI_RA007_Epitope_Rep5 1179.53809658439 1179.5364449037902 38.469 3 -1.3333882722703185 0.3939590075512406 1.0 ['ZNF835|p.R354S|1|0.13|ENSG00000127903|chr19:56664139-56664139|G/T|missense_variant'] 40148 15903 HQDKYRFLVLP True NCI_RA007_Epitope_Rep2 1414.7721192705 1414.77102993586 66.576 2 -1.333425126034514 0.3939590075512406 1.0 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000594090.5_1_19:50491627-50519408:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000600284.5_1_19:50490096-50500767:-|nuORF'] 131636 8485 VTLTQKII True NCI_RA007_Epitope_Rep3 914.5800679841799 914.57896993586 40.451 2 -1.3335841299368267 0.3939662715297671 1.0 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'nc|ENSG00000167716|Q562E7-2|WDR81', 'nc|ENSG00000167716|Q562E7-6|WDR81', 'nc|ENSG00000167716|Q562E7-5|WDR81', 'nc|ENSG00000167716|Q562E7-3|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 142419 16826 YYFCRWYRNRK True NCI_RA007_Epitope_Rep1 1653.7986854548496 1653.79758993586 69.579 2 -1.3338627266725762 0.39405743599578097 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 80143 19430 PFRGRKEKVKR True NCI_RA007_Epitope_Rep3 1399.8524352798697 1399.8507749037901 84.779 3 -1.3338921563832375 0.3940719610710262 1.0 ['ENSG00000198873|ENST00000392870|GRK5', 'GRK5|p.F448Sfs*4|1|0.18|ENSG00000198873|chr10:119448197-119448197|C/-|frameshift_variant'] 69182 14644 LTSDNVIR True PC9_epitope_Rep1 916.4977949122 916.49668993586 61.151 2 -1.3339103732794986 0.3940719610710262 1.0 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 119591 24889 VATLVICLL True PC9_epitope_Rep1 943.57762545603 943.57707496793 100.65 1 -1.3339914541440523 0.39407922334751605 1.0 ['MCHR1|p.R325Afs*22|1|0.26|ENSG00000128285|chr22:40681630-40681630|C/-|frameshift_variant', 'ENSG00000128285|ENST00000249016|MCHR1'] 36370 23449 GVFFLFFG True PC9_epitope_Rep4 932.4796256669198 932.47907496793 98.483 1 -1.3340685568668882 0.3940817622877141 1.0 ['ENST00000545113.1_1_12:21654752-21659919:+|nuORF', 'ENST00000545093.5_1_12:21654752-21665258:+|nuORF', 'ENSG00000111711|ENST00000229314|GOLT1B'] 109213 4820 TAREGLAAPP True H1975_Epitope_Rep3 981.5243440132098 981.52324993586 23.666 2 -1.3341212449405562 0.3940817622877141 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 63386 21318 LLVETRKLLL True PC9_epitope_Rep4 1196.7856440763198 1196.78454993586 90.166 2 -1.3341627664705082 0.39409628590946677 1.0 ['ENST00000446176.6_1_9:132651045-132651225:-|nuORF'] 56688 12488 LDKNDNAPAL True PC9_epitope_Rep2 1069.54038800017 1069.53928993586 53.344 2 -1.3341656986673618 0.39409628590946677 1.0 ['PCDHA4|p.E558K|1|0.09|ENSG00000204967|chr5:140808859-140808859|G/A|missense_variant'] 81410 13507 PLEGRRYHIYE True PC9_epitope_Rep3 1431.72589735407 1431.72480993586 57.005 2 -1.334209958044724 0.39410354745925213 1.0 ['ENST00000471332.1_1_3:403392-405149:+|nuORF', 'nc|ENSG00000134121|O00533|CHL1', 'ENSG00000134121|ENST00000256509|CHL1'] 102116 24074 SLRLRWLRQ True H1975_Epitope_Rep3 1226.7360085453 1226.73490993586 100.32 2 -1.334270731436505 0.39411807003667215 1.0 ['ENSG00000178694|ENST00000314622|NSUN3'] 72461 9760 MKVRIFLKK True NCI_RA007_Epitope_Rep3 1161.74200544253 1161.7403549037901 45.456 3 -1.3342840595679646 0.39411807003667215 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 122601 19039 VGFKNLAL True PC9_epitope_Rep5 860.5119884243599 860.51088993586 78.262 2 -1.3343791753083376 0.3941398525975193 1.0 ['ENST00000474944.5_1_8:94767142-94822123:+|nuORF', 'TMEM67|p.G821Vfs*19|1|0.14|ENSG00000164953|chr8:93808860-93808860|A/-|frameshift_variant', 'ENSG00000164953|ENST00000453321|TMEM67'] 49825 20612 KHRQQRRKDP True NCI_RA007_Epitope_Rep2 1347.7595975241898 1347.75850993586 85.253 2 -1.3343885074283848 0.3941398525975193 1.0 ['ENST00000494993.1_1_15:91475575-91475770:-|nuORF', 'nc|ENSG00000184508|Q8N4P3-2|HDDC3', 'ENSG00000184508|ENST00000394272|HDDC3'] 67262 3512 LSRQPRDFG True H1975_Epitope_Rep3 1074.55704112382 1074.55594993586 18.442 2 -1.3344523395745693 0.3941398525975193 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 22871 7671 EVDEFHLILEY True NCI_RA007_Epitope_Rep1 1405.67654711981 1405.6754499358601 33.831 2 -1.334574805187793 0.3941710806988951 1.0 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000569517.5_1_15:73047978-73075652:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 76241 12051 NPEREIEVPD True H1975_Epitope_Rep1 1196.567331024 1196.56622993586 51.364 2 -1.3347354007435122 0.3942215511456236 1.0 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'EML4-ALK|7|fusion', 'EML4-ALK|6|fusion'] 59622 8118 LFYGRDVN True NCI_RA007_Epitope_Rep3 982.4872302284999 982.48612993586 39.036 2 -1.3347559846761492 0.3942215511456236 1.0 ['nc|ENSG00000082126|Q96JB8-3|MPP4', 'ENST00000486212.6_1_2:202531091-202563346:-|nuORF', 'ENST00000483841.2_1_2:202545559-202558746:-|nuORF', 'nc|ENSG00000082126|Q96JB8-5|MPP4', 'nc|ENSG00000082126|Q96JB8-2|MPP4', 'nc|ENSG00000082126|Q96JB8-4|MPP4', 'ENSG00000082126|ENST00000409474|MPP4'] 16324 9902 EEGWTRLK True H1975_Epitope_Rep3 1017.5243440132099 1017.52324993586 43.119 2 -1.334817928808096 0.3942288104111493 1.0 ['ENSG00000119922|ENST00000371826|IFIT2'] 120472 6185 VEESERLFQ True H1975_Epitope_Rep2 1135.5509526838698 1135.5503749679299 28.761 1 -1.334876555613171 0.39423606950269624 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 64193 9743 LPGIHVSA True PC9_epitope_Rep4 792.4493881678 792.44828993586 45.113 2 -1.3349212903343226 0.3942505871638786 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 23550 9236 EVWLDSPGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 40.482 2 -1.3349269853914842 0.3942505871638786 1.0 ['TBKBP1|p.D29Y|1|0.42|ENSG00000198933|chr17:47696197-47696197|G/T|missense_variant'] 119228 15056 VALACFLHFG True PC9_epitope_Rep2 1076.54772231008 1076.5466299358602 63.171 2 -1.3350607681126652 0.394281811318946 1.0 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'ENST00000488639.6_1_19:43015548-43016560:-|nuORF', 'nc|ENSG00000079385|P13688-7|CEACAM1'] 35204 25147 GRALWHLRLA True NCI_RA007_Epitope_Rep2 1191.69889476059 1191.6972449037899 105.91 3 -1.3350865056128192 0.39428906942746905 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 132709 11723 VVHHRIHTG True PC9_epitope_Rep1 1054.57844527474 1054.57787496793 49.968 1 -1.3352106550003688 0.3943515145705521 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 46746 12594 ITEMIHFWKHS True PC9_epitope_Rep5 1427.7019911053499 1427.70088993586 53.442 2 -1.3352116893152464 0.3943515145705521 1.0 ['ENST00000411846.6_1_1:108815923-108880006:+|nuORF'] 80695 6725 PGWPGPGR True PC9_epitope_Rep5 822.4136713654199 822.41256993586 30.838 2 -1.3352726119423828 0.39436602842148144 1.0 ['ENST00000560958.1_1_15:83395247-83395832:-|nuORF'] 65577 11709 LRSPNRDFLTH True PC9_epitope_Rep5 1354.7105816430999 1354.7094899358601 50.037 2 -1.3352750323271205 0.39436602842148144 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 83890 14771 PVPQLQPEIL True PC9_epitope_Rep6 1132.6492101731599 1132.64755490379 68.773 3 -1.3353360246215218 0.39437328508609015 1.0 ['nc|ENSG00000143382|Q6UY14-2|ADAMTSL4', 'ENSG00000143382|ENST00000271643|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-3|ADAMTSL4'] 59520 12194 LFRWDPGAL True PC9_epitope_Rep1 1073.5658149023698 1073.56470993586 51.762 2 -1.3355165218431742 0.3944117611818694 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 57780 5045 LEERENAGVDP True NCI_RA007_Epitope_Rep1 1227.5731446804298 1227.5714849037902 23.708 3 -1.3355527176387114 0.3944117611818694 1.0 ['ENSG00000068394|ENST00000156109|GPKOW'] 34745 11569 GQEVYSNLR True PC9_epitope_Rep5 1064.5250722892 1064.5239699358601 49.494 2 -1.335593520509173 0.3944120959432583 1.0 ['ALDH1L2|p.H40N|1|0.15|ENSG00000136010|chr12:105073936-105073936|G/T|missense_variant'] 19270 17962 ELKKEEFR True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 74.395 2 -1.335613473165271 0.3944120959432583 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'NLRP4|p.E797Nfs*16|1|0.56|ENSG00000160505|chr19:55870861-55870861|G/-|frameshift_variant'] 70541 13061 LVYLDYIRV True NCI_RA007_Epitope_Rep1 1152.6542955536 1152.6531899358602 54.796 2 -1.3356711862526323 0.3944120959432583 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'ENST00000469881.1_1_11:3697391-3700990:-|nuORF'] 97027 24005 SCPGPCHPSG True H1975_Epitope_Rep1 940.3531219078 940.35202993586 99.617 2 -1.3356815963757809 0.3944120959432583 1.0 ['ENST00000369682.4_1_X:153701276-153701513:+|nuORF'] 76033 17861 NMAKAKMKNK True NCI_RA007_Epitope_Rep3 1162.63146901738 1162.62982490379 78.298 3 -1.335704865103061 0.3944120959432583 1.0 ['nc|ENSG00000128989|P56211-2|ARPP19', 'ENSG00000128989|ENST00000249822|ARPP19', 'nc|ENSG00000143420|O43768-6|ENSA', 'nc|ENSG00000143420|O43768-5|ENSA', 'nc|ENSG00000143420|O43768-2|ENSA', 'ENSG00000143420|ENST00000369014|ENSA', 'nc|ENSG00000143420|O43768-9|ENSA', 'nc|ENSG00000143420|O43768-7|ENSA', 'nc|ENSG00000143420|O43768-3|ENSA', 'nc|ENSG00000143420|O43768-4|ENSA', 'ENST00000565288.1_1_15:52844133-52849247:-|nuORF'] 3166 18123 AGDSWYQPSL True PC9_epitope_Rep1 1122.49818883502 1122.49708993586 74.501 2 -1.3357509158029646 0.39443386167319605 1.0 ['GPBP1L1|p.H67Y|1|0.27|ENSG00000159592|chr1:45654821-45654821|G/A|missense_variant'] 70679 22059 LWKGQVPLIGC True PC9_epitope_Rep6 1212.6689000719198 1212.66724490379 97.783 3 -1.3358230664409143 0.39443386167319605 1.0 ['ENST00000377575.2_1_6:26545813-26545903:+|nuORF'] 88064 5674 QRQVWMLFEYP True NCI_RA007_Epitope_Rep4 1495.7282058531898 1495.72654490379 28.43 3 -1.3358502457896841 0.39443386167319605 1.0 ['KCNA1|p.L155M|1|0.18|ENSG00000111262|chr12:4911841-4911841|C/A|missense_variant'] 79201 9604 PAPDWDAL True H1975_Epitope_Rep1 883.4075829254699 883.40703496793 41.867 1 -1.3360907465110166 0.39445309692104946 1.0 ['nc|ENSG00000284730|P0DPE3|TMDD1'] 121752 15958 VFLVSVPAAP True PC9_epitope_Rep6 998.5800679841798 998.57896993586 73.681 2 -1.3361463631272787 0.3944723317080184 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 29108 12332 FTKYSYKY True H1975_Epitope_Rep1 1098.53859709502 1098.53750993586 52.465 2 -1.3361735878864174 0.39447486013441474 1.0 ['STAB1|p.S2079Mfs*27|1|0.08|ENSG00000010327|chr3:52521915-52521933|AGCCTGGGCTATGAAGGGG/-|frameshift_variant', 'ENSG00000010327|ENST00000321725|STAB1', 'nc|ENSG00000010327|Q9NY15-2|STAB1', 'ENST00000481607.1_1_3:52529402-52542549:+|nuORF'] 17065 9956 EGGWVRRP True NCI_RA007_Epitope_Rep4 955.4987979717099 955.49770993586 45.139 2 -1.3361756505309423 0.39447486013441474 1.0 ['ENST00000514302.5_1_4:8602857-8612970:+|nuORF', 'CPZ|p.R620Gfs*22|1|0.39|ENSG00000109625|chr4:8619515-8619515|C/-|frameshift_variant', 'nc|ENSG00000109625|Q66K79-2|CPZ', 'ENSG00000109625|ENST00000360986|CPZ'] 112518 14473 TLDSSAAP True H1975_Epitope_Rep3 760.36029837988 760.35974496793 61.03 1 -1.3362334706874746 0.3944821141912452 1.0 ['ENSG00000150768|ENST00000280346|DLAT', 'ENST00000533297.1_1_11:111896132-111933256:+|nuORF', 'DLAT|p.P189T|1|0.06|ENSG00000150768|chr11:112028850-112028850|C/A|missense_variant'] 13307 11914 DLTQRCWE True H1975_Epitope_Rep3 1049.46002950449 1049.4589299358602 50.98 2 -1.3363012255269755 0.394513327343516 1.0 ['nc|ENSG00000132640|Q9Y2F9-2|BTBD3', 'ENSG00000132640|ENST00000378226|BTBD3'] 112708 5177 TLGPRGSLS True PC9_epitope_Rep2 886.4872302285 886.48612993586 25.298 2 -1.3363730381552097 0.3945325602568403 1.0 ['ENST00000335295.4_1_11:5247937-5248187:-|nuORF'] 21572 17702 ERQNRRILHSK True NCI_RA007_Epitope_Rep3 1435.81202701987 1435.81092993586 77.614 2 -1.3364119207427363 0.3945350870888138 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 15876 12741 EDIFWPCTL True PC9_epitope_Rep2 1122.50558271458 1122.5044899358602 54.312 2 -1.336428453181147 0.3945350870888138 1.0 ['ENST00000441302.6_1_3:39139484-39139703:-|nuORF'] 36891 23022 GVLNIHENK True PC9_epitope_Rep1 1022.55089311422 1022.5497899358601 93.352 2 -1.336431573844269 0.3945376137997125 1.0 ['KLHDC10|p.V384L|1|0.23|ENSG00000128607|chr7:130130567-130130567|G/T|missense_variant'] 122378 15804 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 65.944 2 -1.3364440865068536 0.3945376137997125 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2'] 115966 8095 TSIEKEVFPIM True H1975_Epitope_Rep1 1292.6686252883999 1292.66752993586 36.083 2 -1.336503984457263 0.3945666235446313 1.0 ['ENSG00000173540|ENST00000308388|GMPPB', 'nc|ENSG00000173540|Q9Y5P6-2|GMPPB'] 20337 5239 ENVQVRDAGL True H1975_Epitope_Rep2 1099.56218607391 1099.56108993586 25.22 2 -1.3365896823023091 0.3945666235446313 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 27758 14783 FPTFVAYE True PC9_epitope_Rep4 972.4592841451598 972.45818993586 64.795 2 -1.3366292396329318 0.3945666235446313 1.0 ['ENSG00000150403|ENST00000434316|TMCO3', 'ENST00000491166.1_1_13:114201574-114203850:+|nuORF', 'ENST00000460039.5_1_13:114200091-114203850:+|nuORF'] 123474 4106 VGPCCTCCC True NCI_RA007_Epitope_Rep1 887.2468085580699 887.24570993586 20.037 2 -1.3366538877696563 0.3945666235446313 1.0 ['nc|ENSG00000112212|Q5TGU0-2|TSPO2'] 83213 7845 PSVDPERVL True PC9_epitope_Rep2 1010.53965972418 1010.53856993586 35.546 2 -1.3366639187869536 0.3945691493184486 1.0 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000494526.1_1_10:5948484-5951317:+|nuORF'] 20855 14684 EQKWKWWEEER True H1975_Epitope_Rep1 1632.76849044204 1632.7673899358601 61.697 2 -1.3366704490788899 0.3945691493184486 1.0 ['ENSG00000198900|ENST00000361337|TOP1'] 89730 3296 RADFNRRRTN True NCI_RA007_Epitope_Rep5 1304.6810128503198 1304.6793749037902 18.202 3 -1.3367230682154416 0.39457640111634146 1.0 ['nc|ENSG00000159167|P52823-2|STC1', 'ENSG00000159167|ENST00000290271|STC1'] 56524 19704 LDFVTLEL True H1975_Epitope_Rep2 948.5167990212799 948.51570993586 81.761 2 -1.336814487566155 0.3945836527405136 1.0 ['ENST00000318709.8_1_7:32627221-32627503:+|nuORF'] 19459 5124 ELNKPPLGP True H1975_Epitope_Rep1 963.5389314481898 963.53782993586 24.779 2 -1.336827215251325 0.39458397709987664 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 7738 5702 ASPPEGPQSY True H1975_Epitope_Rep3 1031.45598966987 1031.4554749679298 26.964 1 -1.336878068777174 0.39458397709987664 1.0 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 74212 8744 NEGRRAVSVHE True NCI_RA007_Epitope_Rep2 1252.62724594196 1252.6261499358602 38.658 2 -1.336904062451052 0.39458397709987664 1.0 ['ENST00000602368.1_3_16:67688780-67691418:+|nuORF'] 58522 14195 LEQFRVAHED True PC9_epitope_Rep3 1242.59929985862 1242.59820993586 59.686 2 -1.3369056637961216 0.39458397709987664 1.0 ['ENSG00000164610|ENST00000297157|RP9'] 122508 23471 VGEMFPADHPP True PC9_epitope_Rep1 1195.5331944447498 1195.53208993586 95.067 2 -1.3369358416932775 0.39458397709987664 1.0 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 89265 9146 QVVMLYINCK True PC9_epitope_Rep5 1209.6249866546102 1209.6233549037902 40.127 3 -1.3369782870123599 0.39461518192924044 1.0 ['ENSG00000197312|ENST00000480945|DDI2', 'nc|ENSG00000197312|Q5TDH0-3|DDI2'] 91678 5847 RIWWNWLCLSW True NCI_RA007_Epitope_Rep1 1561.76526006825 1561.76362490379 26.795 3 -1.337035242510934 0.3946155043772979 1.0 ['ENST00000558850.5_1_14:102798088-102800954:+|nuORF'] 76199 5329 NNLRKELSQYI True NCI_RA007_Epitope_Rep4 1376.7412130650398 1376.7401099358601 27.063 2 -1.3370663869810797 0.3946155043772979 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 3335 6309 AGGLKELE True PC9_epitope_Rep1 815.4388830537499 815.43778993586 29.081 2 -1.337101506193451 0.3946155043772979 1.0 ['nc|ENSG00000142186|Q96KG9-3|SCYL1', 'nc|ENSG00000142186|Q96KG9-4|SCYL1', 'nc|ENSG00000142186|Q96KG9-2|SCYL1', 'ENSG00000142186|ENST00000270176|SCYL1', 'nc|ENSG00000142186|Q96KG9-5|SCYL1', 'nc|ENSG00000142186|Q96KG9-6|SCYL1'] 63665 21846 LMRNAMIKI True PC9_epitope_Rep1 1088.61984170452 1088.61874993586 88.84 2 -1.3371177145571713 0.3946155043772979 1.0 ['ENST00000541981.5_1_12:32145534-32145603:+|nuORF'] 91794 25138 RKHKKHPT True PC9_epitope_Rep1 1030.6148307834599 1030.6137299358602 101.58 2 -1.3371325337744626 0.3946155043772979 1.0 ['ENSG00000130287|ENST00000252575|NCAN'] 82755 24063 PRLCALYA True PC9_epitope_Rep2 905.47930839709 905.47820993586 98.061 2 -1.3372054370734454 0.3946347305389222 1.0 ['ENSG00000167914|ENST00000301659|GSDMA'] 7758 9250 ASQQQVEVYKI True NCI_RA007_Epitope_Rep2 1291.67721582615 1291.67610993586 40.589 2 -1.3373879319349606 0.3946564794079255 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 116142 11792 TSTEEDDFHLQ True H1975_Epitope_Rep3 1320.54698950224 1320.54588993586 50.504 2 -1.337439106314864 0.3946564794079255 1.0 ['ENSG00000172840|ENST00000311765|PDP2', 'PDP2|p.L450Sfs*25|1|0.44|ENSG00000172840|chr16:66885628-66885628|G/-|frameshift_variant'] 81594 17206 PLKVSDYS True PC9_epitope_Rep4 907.46509780159 907.46400993586 74.188 2 -1.337457540960109 0.3946564794079255 1.0 ['nc|ENSG00000168060|Q9UQQ1-8|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-2|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-3|NAALADL1', 'ENSG00000168060|ENST00000358658|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-4|NAALADL1', 'ENST00000534568.1_1_11:64813497-64813763:-|nuORF', 'ENST00000532450.5_1_11:64812392-64813763:-|nuORF', 'ENST00000531174.1_1_11:64813610-64815186:-|nuORF'] 120935 7686 VENYLRHLKMH True NCI_RA007_Epitope_Rep2 1438.7503382801 1438.74924993586 34.523 2 -1.3374639350910058 0.39465900245494284 1.0 ['ENSG00000186130|ENST00000373659|ZBTB6'] 52431 19451 KKRRHLTPT True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 81.706 2 -1.3374941182300137 0.39465900245494284 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 13131 6550 DLRAHRRTHA True NCI_RA007_Epitope_Rep1 1231.6646345101901 1231.66297490379 29.493 3 -1.3375829776336292 0.39469020190165977 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 30964 13684 GARSWGSRDVY True NCI_RA007_Epitope_Rep5 1252.5948831845199 1252.59378993586 59.319 2 -1.3375952580572126 0.3946927240503904 1.0 ['ENST00000361396.6_1_13:96295902-96296766:-|nuORF'] 16173 11833 EEDWEVFDPY True NCI_RA007_Epitope_Rep2 1327.52446315251 1327.52336993586 50.629 2 -1.33759528763748 0.3946927240503904 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 109945 15427 TEGKNRLFF True PC9_epitope_Rep2 1110.5821932425 1110.58108993586 64.618 2 -1.33769343763581 0.3947358967296938 1.0 ['ENST00000382292.7_2_13:23985465-23985534:-|nuORF'] 67005 10508 LSPLLSAPCLR True NCI_RA007_Epitope_Rep2 1168.66381469148 1168.6627099358602 45.469 2 -1.3378229010589262 0.39476961394769616 1.0 ['ENST00000476091.1_1_9:130287163-130289496:-|nuORF'] 66200 11870 LSESC[Carbamidomethyl]VLGLV True PC9_epitope_Rep4 1075.55834684286 1075.55724993586 53.433 2 -1.3378287774254292 0.39476961394769616 1.0 ['ENST00000479638.5_1_6:160210956-160211809:+|nuORF'] 7313 20760 ARLKYEKEEME True NCI_RA007_Epitope_Rep5 1424.6969652945597 1424.6958699358602 86.829 2 -1.3378415389523273 0.39476961394769616 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7', 'ENST00000557684.5_1_12:25267803-25348012:-|nuORF', 'nc|ENSG00000118307|Q6TDU7|DNAI7'] 79872 16187 PELEIDVDELL True PC9_epitope_Rep3 1283.64966366563 1283.64802490379 67.401 3 -1.3379544505462222 0.39481278363847544 1.0 ['ENST00000509033.1_1_4:140036086-140036467:-|nuORF', 'ENSG00000173457|ENST00000309318|PPP1R14B'] 131610 12122 VTLQIPFYRP True PC9_epitope_Rep3 1232.6917436914798 1232.6906499358602 51.669 2 -1.3381637100916914 0.39484397825514284 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E922Sfs*10|1|0.13|ENSG00000048707|chr1:12276351-12276351|G/-|frameshift_variant', 'VPS13D|p.F411Lfs*76|1|0.19|ENSG00000048707|chr1:12260966-12260966|T/-|frameshift_variant'] 53924 19486 KTPKQRLREL True NCI_RA007_Epitope_Rep5 1267.77245362367 1267.7713499358601 81.84 2 -1.3383077218417652 0.39485405042982685 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 106821 16760 SVAPLSPVP True PC9_epitope_Rep4 865.49091862661 865.49037496793 72.433 1 -1.338376318778619 0.39485405042982685 1.0 ['ENST00000335142.5_1_14:56043911-56046785:-|nuORF', 'ENST00000554558.5_1_14:55966046-56046785:-|nuORF'] 126996 20588 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8449649037902 84.307 3 -1.3384016607293259 0.39485405042982685 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 40619 23713 HRLALTKL True H1975_Epitope_Rep2 950.60253476426 950.60142993586 97.711 2 -1.3384054140370494 0.39485405042982685 1.0 ['ENST00000557271.5_1_14:105211116-105211251:+|nuORF'] 81697 24654 PLLYQLNL True NCI_RA007_Epitope_Rep5 972.56441792004 972.56332993586 102.32 2 -1.3384559716932325 0.39485405042982685 1.0 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|125|3|anti-sense'] 55655 8831 LAKVEKAL True NCI_RA007_Epitope_Rep3 870.5538532363398 870.55274993586 41.828 2 -1.3384946250124514 0.39485405042982685 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.K1257Efs*12|1|0.04|ENSG00000152818|chr6:144485465-144485466|-/GAGTTGAAACTTC|frameshift_variant'] 74356 9255 NEQLGQIHYI True PC9_epitope_Rep4 1213.60913626633 1213.60750490379 43.198 3 -1.3385535283508017 0.39485405042982685 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 47624 16505 IVYMHRFYMIQ True H1975_Epitope_Rep1 1499.7417477423498 1499.7406499358601 68.857 2 -1.3386099056494372 0.39485405042982685 1.0 ['ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 62674 5683 LLLKRIARV True PC9_epitope_Rep2 1080.74953335112 1080.74842993586 27.248 2 -1.3386591308922784 0.3948732684410282 1.0 ['ENST00000269445.10_1_18:46570279-46570333:-|nuORF'] 74611 15275 NGGRPVLR True NCI_RA007_Epitope_Rep3 867.50388335215 867.50278993586 67.632 2 -1.3386747441913163 0.3948805133853743 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 57965 16422 LEGRSQWK True PC9_epitope_Rep1 1002.5246783663798 1002.52358993586 67.99 2 -1.3387571332557258 0.39492367554624364 1.0 ['ENST00000242848.8_2_13:46619177-46626639:-|nuORF'] 62310 20689 LLGARQMGVP True PC9_epitope_Rep1 1040.5800850675198 1040.5789899358601 84.404 2 -1.338904592080235 0.3949359511552736 1.0 ['ENST00000560192.5_1_15:91447248-91454469:+|nuORF'] 89845 10978 RARMQQQL True PC9_epitope_Rep6 1029.55018192157 1029.5490899358601 53.119 2 -1.3389837054375828 0.3949359511552736 1.0 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 64160 11071 LPFLPGEQHP True NCI_RA007_Epitope_Rep2 1133.58694426977 1133.58584993586 47.653 2 -1.3389910652920534 0.3949359511552736 1.0 ['ENSG00000204406|ENST00000642680|MBD5', 'nc|ENSG00000204406|Q9P267|MBD5'] 69325 20769 LTVFWMDFV True PC9_epitope_Rep6 1156.56270366788 1156.5616099358601 92.649 2 -1.3390235750648691 0.3949359511552736 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 68427 2738 LTEVGTMNIFV True H1975_Epitope_Rep2 1222.62676047642 1222.62566993586 14.587 2 -1.3390398620401323 0.3949359511552736 1.0 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 7834 8965 ASVPNLSSR True PC9_epitope_Rep1 929.4930438849301 929.49194993586 39.329 2 -1.3391844402579953 0.39497438107551597 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 67791 20237 LSYYALHHW True PC9_epitope_Rep1 1188.5716285587998 1188.56998490379 82.668 3 -1.3391900087054072 0.39497438107551597 1.0 ['ENSG00000184574|ENST00000329858|LPAR5'] 90047 4159 RDWSWGGA True PC9_epitope_Rep3 933.4093142609698 933.40820993586 21.116 2 -1.3392113785913644 0.3949816240288269 1.0 ['ENST00000557815.1_1_15:70350468-70350999:-|nuORF'] 19686 10565 ELRKKSRRE True NCI_RA007_Epitope_Rep1 1200.70510233984 1200.70400993586 45.079 2 -1.3392927225759081 0.394993894993895 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 92379 19337 RLPEVIALK True PC9_epitope_Rep5 1037.6597152872098 1037.65860993586 79.424 2 -1.3392943747691946 0.394993894993895 1.0 ['ENSG00000100596|ENST00000216484|SPTLC2'] 56758 7424 LDLQNLRFDP True H1975_Epitope_Rep1 1229.6404363946099 1229.6393299358601 33.56 2 -1.3392965556186833 0.394993894993895 1.0 ['ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'nc|ENSG00000290798|Q9H1B4-5|NXF5', 'nc|ENSG00000290798|Q9H1B4-4|NXF5', 'nc|ENSG00000290798|Q9H1B4-6|NXF5', 'nc|ENSG00000290798|Q9H1B4-2|NXF5', 'nc|ENSG00000290798|Q9H1B4|NXF5', 'nc|ENSG00000290798|Q9H1B4-3|NXF5'] 123460 7058 VGPAGEHR True PC9_epitope_Rep5 821.41439964141 821.41330993586 32.117 2 -1.3393424032659336 0.394993894993895 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3', 'ENST00000526008.5_1_19:17949989-17958765:-|nuORF', 'nc|ENSG00000105639|P52333-4|JAK3', 'ENST00000527031.5_1_19:17947866-17955268:-|nuORF', 'ENST00000528705.1_1_19:17950262-17953325:-|nuORF'] 60740 14019 LHRLLLLFLV True PC9_epitope_Rep3 1235.81179925451 1235.8101449037902 59.006 3 -1.3394415488573082 0.394993894993895 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 109795 15964 TEEAVYCFY True H1975_Epitope_Rep2 1123.4532127885498 1123.45210993586 66.604 2 -1.3395116672616796 0.3950011371934067 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 71545 20996 MALLYFHL True H1975_Epitope_Rep2 1006.53100961678 1006.52990993586 86.911 2 -1.3396312678012983 0.3950203495331578 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 20195 15118 ENIILYLRI True PC9_epitope_Rep2 1145.68084465461 1145.6791949037902 63.409 3 -1.3398784872982596 0.39507547192396547 1.0 ['ENST00000295025.12_1_2:61149778-61149811:+|nuORF'] 28441 13208 FSDFQLIRDQV True H1975_Epitope_Rep1 1366.68811486302 1366.68700993586 55.902 2 -1.3400736622796285 0.39511389344409464 1.0 ['nc|ENSG00000257520|P0C7M3|SFTA3'] 74416 8384 NESNRPDLL True PC9_epitope_Rep3 1056.5199869087598 1056.5188899358602 37.216 2 -1.3400852320445913 0.39511389344409464 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2', 'SLC9C2|p.S555Vfs*10|1|0.12|ENSG00000162753|chr1:173535942-173535943|-/AC|frameshift_variant'] 58928 10463 LETLNYQMLWQ True NCI_RA007_Epitope_Rep1 1437.69623701857 1437.6951299358602 44.682 2 -1.3401542351663602 0.3951211337738198 1.0 ['ENST00000459737.5_1_14:56078878-56079043:+|nuORF'] 83549 24254 PTWDLPRRL True PC9_epitope_Rep3 1152.64037682496 1152.63874490379 98.596 3 -1.3401748931081066 0.3951236444593398 1.0 ['ENST00000290079.8_1_9:139687350-139687656:+|nuORF'] 141653 16600 YTSQTTRLL True PC9_epitope_Rep2 1081.57677350889 1081.57566993586 69.094 2 -1.3401772907067713 0.3951236444593398 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 9338 20198 AVRGYYHCYSP True PC9_epitope_Rep4 1314.5815416195 1314.58044993586 85.829 2 -1.3404207574301712 0.3951406343506882 1.0 ['ENSG00000175267|ENST00000389398|VWA3A'] 122911 4814 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 23.885 2 -1.3404615517297 0.3951406343506882 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 82210 10227 PPADGALK True PC9_epitope_Rep5 767.41775368635 767.41664993586 44.327 2 -1.3404873239508421 0.3951406343506882 1.0 ['ENSG00000011485|ENST00000012443|PPP5C'] 22723 6094 ETSIPSVRPP True H1975_Epitope_Rep3 1081.57677350889 1081.57566993586 28.453 2 -1.3405709603247635 0.3951406343506882 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 30388 10258 GADYFKKRLK True PC9_epitope_Rep2 1224.69789170108 1224.6967899358601 44.79 2 -1.3407021278852809 0.3951718112290697 1.0 ['ENST00000555711.5_1_12:25357018-25357243:+|nuORF', 'ENSG00000205707|ENST00000381356|ETFRF1'] 46961 12283 ITPLTDRCYLC True NCI_RA007_Epitope_Rep1 1296.62062955016 1296.61952993586 51.748 2 -1.3408432447139078 0.3952269245499809 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 88474 19210 QSSVVRCRPLT True NCI_RA007_Epitope_Rep5 1244.6659399497998 1244.66484993586 80.756 2 -1.340925538310831 0.39524140077075903 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 83458 26460 PTPPDELLPQA True PC9_epitope_Rep2 1176.60265390356 1176.60100490379 108.2 3 -1.340964504553194 0.39524140077075903 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 130587 14514 VSSEIYQWVR True PC9_epitope_Rep1 1265.64043639461 1265.6393299358601 60.652 2 -1.34104366822851 0.3952486386212674 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'SATB1|p.D441Pfs*41|1|0.48|ENSG00000182568|chr3:18386500-18386501|TT/-|frameshift_variant'] 58826 7902 LESRDKGL True PC9_epitope_Rep2 916.4977949121999 916.49668993586 35.761 2 -1.3411355035399455 0.39529178036287044 1.0 ['ENSG00000257743|ENST00000477922|MGAM2', 'ENST00000496337.1_1_7:141870985-141908039:+|nuORF'] 74659 17762 NGLTRHRR True NCI_RA007_Epitope_Rep5 1008.5689432202 1008.56784993586 75.106 2 -1.3411708150997383 0.39530904086639146 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 130384 16852 VSLDDGWI True PC9_epitope_Rep5 903.43379767331 903.43270993586 69.83 2 -1.3413067489943018 0.39530904086639146 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 118556 13806 TYQRHYRNVFH True H1975_Epitope_Rep3 1519.74327875371 1519.74218993586 58.41 2 -1.3413650042852743 0.39530904086639146 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 43794 5684 IHQAGGSPPA True PC9_epitope_Rep2 933.4668291370899 933.4657299358599 27.251 2 -1.3414017649094603 0.39530904086639146 1.0 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR'] 35558 5129 GSVPSIRRNFH True PC9_epitope_Rep5 1268.67380221156 1268.67214490379 24.752 3 -1.341502255025362 0.39530904086639146 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 141137 5394 YSSLGDFVSEM True PC9_epitope_Rep2 1233.5223549775299 1233.5212499358602 26.141 2 -1.3415136681353446 0.39530904086639146 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 140470 22834 YRIGKVTS True PC9_epitope_Rep4 922.52361573722 922.52250993586 96.054 2 -1.3415139051805454 0.39530904086639146 1.0 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'UQCRC2|p.L444Ffs*8|1|0.28|ENSG00000140740|chr16:21983137-21983138|-/T|frameshift_variant', 'ENSG00000140740|ENST00000268379|UQCRC2'] 11393 24976 DESKKLLV True PC9_epitope_Rep5 930.5385970950199 930.53750993586 101.24 2 -1.3415524537801686 0.39530904086639146 1.0 ['PROC|p.I390Tfs*28|1|0.17|ENSG00000115718|chr2:127428723-127428732|CGGGCATCCT/-|frameshift_variant', 'ENSG00000115718|ENST00000234071|PROC', 'nc|ENSG00000115718|P04070-2|PROC'] 38544 6162 HESPEERHS True NCI_RA007_Epitope_Rep1 1106.4740993455 1106.47300993586 28.005 2 -1.3415561016613131 0.39530904086639146 1.0 ['nc|ENSG00000186566|Q9UKJ3-2|GPATCH8', 'ENSG00000186566|ENST00000591680|GPATCH8'] 122292 10508 VGAVQHVL True PC9_epitope_Rep1 821.47593726881 821.47484993586 45.309 2 -1.3415817450728245 0.3953115464238276 1.0 ['ENST00000451055.6_1_3:122632522-122634295:-|nuORF'] 76115 561 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 3.1059 3 -1.3415940647042055 0.3953115464238276 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 80334 14194 PGGGGSPC True NCI_RA007_Epitope_Rep4 630.24316045266 630.2426149679301 61.878 1 -1.3416201535926473 0.39531405186133617 1.0 ['ENSG00000165506|ENST00000298292|DNAAF2', 'nc|ENSG00000165506|Q9NVR5-2|DNAAF2'] 132444 6052 VVCAPGTRE True NCI_RA007_Epitope_Rep4 930.4593012285 930.4582099358599 29.896 2 -1.3416424517682222 0.39531405186133617 1.0 ['ENST00000379589.3_1_13:40175494-40177154:-|nuORF'] 137033 16421 YALQRIQE True PC9_epitope_Rep1 1019.5399940773499 1019.53888993586 67.987 2 -1.3417815566890465 0.3953332535598899 1.0 ['ENST00000562938.5_1_15:78207528-78213944:-|nuORF'] 63707 13814 LNAKDLLQ True PC9_epitope_Rep4 913.5232813840498 913.5227349679301 61.031 1 -1.3418483401529286 0.3953524547989135 1.0 ['ENSG00000134371|ENST00000367435|CDC73'] 69231 7719 LTSSGSLR True PC9_epitope_Rep2 819.44503106335 819.44392993586 35.068 2 -1.3418707157861427 0.3953549591375205 1.0 ['ENST00000494883.1_1_9:134396759-134397813:+|nuORF'] 86058 19234 QHRRLVSHPRR True H1975_Epitope_Rep2 1440.8286801435197 1440.82702490379 79.829 3 -1.34187920870408 0.3953549591375205 1.0 ['RNF165|p.H268Tfs*40|1|0.31|ENSG00000141622|chr18:46450781-46450781|C/-|frameshift_variant', 'ENSG00000141622|ENST00000269439|RNF165'] 81264 23053 PKSLRSVRRRE True PC9_epitope_Rep4 1382.8218634275802 1382.82022490379 96.895 3 -1.341963305810744 0.3953861248713715 1.0 ['ENST00000175091.4_1_2:20251387-20251465:-|nuORF'] 132792 16424 VVKESSADLLL True PC9_epitope_Rep4 1172.66525416012 1172.66414993586 71.136 2 -1.3420624603818678 0.3954005934718101 1.0 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.S1928Lfs*58|1|0.21|ENSG00000171467|chr6:43338204-43338216|TTCTAGAAGCTGA/-|frameshift_variant', 'ZNF318|p.I1646Lfs*8|1|0.7|ENSG00000171467|chr6:43339063-43339063|G/-|frameshift_variant'] 36527 10259 GVGPWHWPQR True PC9_epitope_Rep1 1218.60466002258 1218.6035699358602 44.344 2 -1.3420764293189877 0.3954005934718101 1.0 ['CD177|p.L422Pfs*29|1|0.31|ENSG00000204936|chr19:43362270-43362271|-/CT|frameshift_variant'] 136659 19947 WWRWLTFWRRL True PC9_epitope_Rep5 1704.9153698895998 1704.9137249037901 81.781 3 -1.3421195266427466 0.39540782751235387 1.0 ['nc|ENSG00000164284|Q8TAA5-2|GRPEL2'] 110624 6863 TFTVQNREL True NCI_RA007_Epitope_Rep4 1106.5720224816198 1106.57092993586 33.018 2 -1.342175414525299 0.39541506137978893 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 58523 5060 LEQGEPLWT True NCI_RA007_Epitope_Rep1 1071.5236753068698 1071.52256993586 23.767 2 -1.3422265813869811 0.39541756401052885 1.0 ['ENST00000599671.1_1_19:52399719-52400225:-|nuORF', 'ENSG00000198093|ENST00000354957|ZNF649'] 43027 22857 IETLSGKKR True PC9_epitope_Rep5 1030.61349337078 1030.6123899358602 92.917 2 -1.3422950701949548 0.39541756401052885 1.0 ['chr10:5004014-5005970|127|116.13|0.0|23.47|-|2|TE_info:L1M4c,L1M4c_dup2264,L1,LINE,donor,+,5005970,5006355|AKR1C2,None|5'] 130281 7677 VSGRKSPVL True NCI_RA007_Epitope_Rep3 941.5658149023699 941.56470993586 37.316 2 -1.3423262738818522 0.39542061441286247 1.0 ['CON__ENSEMBL:ENSBTAP00000034412'] 136459 19567 WVFRRRWRLN True NCI_RA007_Epitope_Rep3 1487.8374539220697 1487.83579490379 85.347 3 -1.3424090958514885 0.39542061441286247 1.0 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 22644 6337 ETNYIRKINP True NCI_RA007_Epitope_Rep2 1246.6669854956199 1246.6658899358602 29.256 2 -1.3424491721157459 0.39542061441286247 1.0 ['ENSG00000135697|ENST00000258168|BCO1'] 80962 26317 PIFPWYAFQL True NCI_RA007_Epitope_Rep5 1280.65938093404 1280.65828993586 108.82 2 -1.3424674705303952 0.39542061441286247 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 122273 11854 VGATFQGK True H1975_Epitope_Rep1 806.4286527232199 806.42810496793 50.594 1 -1.3425442865082011 0.39542061441286247 1.0 ['ENSG00000104755|ENST00000265708|ADAM2', 'nc|ENSG00000104755|Q99965-2|ADAM2', 'ADAM2|p.V521Yfs*7|1|0.06|ENSG00000104755|chr8:39761228-39761228|C/-|frameshift_variant'] 38739 20035 HGKKKKKPSVD True H1975_Epitope_Rep2 1250.7459045226599 1250.74426490379 83.045 3 -1.3425638204868258 0.39542061441286247 1.0 ['ENST00000445338.1_1_10:13633913-13634195:-|nuORF'] 83086 14113 PSNDCNDN True NCI_RA007_Epitope_Rep3 877.28721009261 877.28666496793 62.805 1 -1.3425689706144974 0.39542061441286247 1.0 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-3|ILDR1', 'ENST00000460554.1_1_3:121712781-121740924:-|nuORF', 'nc|ENSG00000145103|Q86SU0-2|ILDR1', 'nc|ENSG00000145103|Q86SU0-6|ILDR1', 'nc|ENSG00000145103|Q86SU0-5|ILDR1'] 47513 13935 IVRHFYYSNRC True NCI_RA007_Epitope_Rep2 1456.70338808768 1456.70228993586 58.859 2 -1.342569194896383 0.39542061441286247 1.0 ['nc|ENSG00000156374|Q9BYE7-3|PCGF6', 'ENSG00000156374|ENST00000369847|PCGF6'] 97376 8634 SEDPPSVFN True H1975_Epitope_Rep3 990.4294405688601 990.42834993586 38.206 2 -1.3425969456968674 0.39542061441286247 1.0 ['nc|ENSG00000188467|Q71RS6-2|SLC24A5', 'SLC24A5|p.L476Ifs*11|1|0.64|ENSG00000188467|chr15:48142273-48142274|-/A|frameshift_variant', 'ENSG00000188467|ENST00000341459|SLC24A5'] 104876 12711 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 55.557 2 -1.3426621760768147 0.39542061441286247 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 60347 22611 LGSPGRRI True PC9_epitope_Rep1 854.50863437942 854.50752993586 91.784 2 -1.3427312606678505 0.39542061441286247 1.0 ['ENST00000569647.1_1_16:50059214-50060668:+|nuORF'] 69322 22654 LTVFWMDFV True PC9_epitope_Rep2 1156.56270366788 1156.5616099358601 92.635 2 -1.3427641653653941 0.39542061441286247 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 30088 16658 FYKIRLPER True NCI_RA007_Epitope_Rep5 1220.7029770815197 1220.7018899358602 70.842 2 -1.3428358315207676 0.3954231164916142 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant'] 72704 20905 MMMMMMMMI True NCI_RA007_Epitope_Rep3 1179.41850796475 1179.41686490379 91.017 3 -1.3428720744386562 0.3954231164916142 1.0 ['ENST00000429734.1_1_10:97949420-97949504:-|nuORF'] 87645 5206 QQRGQQESRR True NCI_RA007_Epitope_Rep2 1271.64429298843 1271.6431899358602 24.869 2 -1.3428832111343767 0.3954303487050661 1.0 ['ENST00000282382.8_2_5:114916706-114916865:-|nuORF'] 74454 8791 NEVKNYER True NCI_RA007_Epitope_Rep1 1050.5094222250598 1050.5088749679298 38.197 1 -1.34296389018683 0.3954308952813827 1.0 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000493691.1_1_6:7410621-7411705:+|nuORF'] 116471 15110 TTLTSRRTTRI True H1975_Epitope_Rep1 1304.75244645508 1304.7513499358602 63.374 2 -1.3430415975251042 0.3954308952813827 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 3397 8607 AGIAPNTMLAK True NCI_RA007_Epitope_Rep1 1085.59031539805 1085.58920993586 37.481 2 -1.3430424240533192 0.3954308952813827 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK'] 53037 17444 KPLPVSLHVR True H1975_Epitope_Rep1 1144.70806246196 1144.70747496793 72.583 1 -1.3430469912984435 0.3954308952813827 1.0 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'ENST00000415574.6_1_2:132250659-132263934:+|nuORF'] 126591 14708 VLLWKRTWWCH True NCI_RA007_Epitope_Rep1 1526.7968945497 1526.79578993586 61.266 2 -1.34305725404708 0.3954308952813827 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 75880 10901 NLQNQASLSF True PC9_epitope_Rep5 1120.5512870370399 1120.55018993586 46.918 2 -1.3430721298638533 0.3954308952813827 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 31095 8765 GAVEPLNKLL True NCI_RA007_Epitope_Rep3 1052.62299542532 1052.62188993586 41.565 2 -1.3431178571898947 0.3954308952813827 1.0 ['ARMC3|p.T73N|1|0.14|ENSG00000165309|chr10:22955858-22955858|C/A|missense_variant'] 92485 22573 RLVTRYIYNR True H1975_Epitope_Rep3 1352.7677025963999 1352.76604490379 94.348 3 -1.3431744078448198 0.3954308952813827 1.0 ['ENST00000487676.1_1_6:32632488-32634384:-|nuORF', 'ENSG00000179344|ENST00000434651|HLA-DQB1'] 58367 12086 LENKEAPWKMR True NCI_RA007_Epitope_Rep1 1400.7234548259198 1400.7223499358602 50.998 2 -1.3432233387303365 0.3954308952813827 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1'] 39346 15507 HKDSKWYQQWK True NCI_RA007_Epitope_Rep2 1532.75244645508 1532.7513499358602 65.024 2 -1.3432274529138462 0.3954308952813827 1.0 ['ENSG00000104980|ENST00000270538|TIMM44', 'ENST00000598675.1_1_19:7997268-7998765:-|nuORF'] 5308 20328 ALQQLGRAL True PC9_epitope_Rep5 968.5767139392399 968.57560993586 83.228 2 -1.3432510134928157 0.3954381264502548 1.0 ['ENST00000526142.5_1_11:428365-428637:-|nuORF'] 27559 25101 FNFMLLPCLK True PC9_epitope_Rep5 1224.6399084427596 1224.63826490379 101.69 3 -1.3432624696835482 0.39544062769113003 1.0 ['ENST00000513761.5_1_4:170541930-170542083:+|nuORF'] 101445 9253 SLKTQWWHWW True NCI_RA007_Epitope_Rep5 1456.70403971068 1456.70294993586 42.241 2 -1.343281047511994 0.39544062769113003 1.0 ['ENST00000318443.9_1_15:73976775-73994724:+|nuORF'] 23213 5811 EVLVPEGP True NCI_RA007_Epitope_Rep2 838.4436340810198 838.44252993586 27.222 2 -1.3433231094671785 0.3954478584841345 1.0 ['nc|ENSG00000162729|Q969P0-3|IGSF8', 'ENSG00000162729|ENST00000314485|IGSF8', 'IGSF8|p.Y38N|1|0.26|ENSG00000162729|chr1:160095199-160095199|A/T|missense_variant'] 75935 5296 NLSKTLSGP True NCI_RA007_Epitope_Rep3 915.5025459394699 915.50199496793 27.841 1 -1.3434609038839638 0.39546704939600524 1.0 ['ENSG00000184811|ENST00000333813|TRARG1'] 49198 15503 KEMMKETFKYF True H1975_Epitope_Rep3 1480.7094445545602 1480.70834993586 65.048 2 -1.3435687747228648 0.3954695498253839 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 64668 7174 LPVEGVPA True PC9_epitope_Rep2 780.4381547777599 780.43704993586 32.987 2 -1.3435916180017837 0.3954695498253839 1.0 ['ENST00000464344.6_1_2:242029410-242041684:-|nuORF', 'ENST00000488567.5_1_2:242029410-242034037:-|nuORF', 'ENST00000241527.10_1_2:242029410-242034678:-|nuORF'] 539 20574 AAPRSEVR True PC9_epitope_Rep4 884.4828135544 884.48170993586 87.291 2 -1.3436302289504296 0.39547205013514486 1.0 ['ENST00000356628.3_1_9:140195350-140195905:-|nuORF'] 131277 19300 VTFWRSSPL True PC9_epitope_Rep2 1091.5763795860698 1091.5752899358602 79.612 2 -1.343639253382973 0.39547205013514486 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 52572 24160 KLHRTSRQHR True PC9_epitope_Rep2 1317.74903284049 1317.7473749037902 98.458 3 -1.3436922646490792 0.3954792800334868 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1'] 98228 8155 SETVSQRTI True PC9_epitope_Rep2 1019.52473793603 1019.52364993586 36.726 2 -1.3437953980554986 0.39551292783850367 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.P1213Qfs*54|1|0.19|ENSG00000155966|chrX:148987378-148987378|C/-|frameshift_variant', 'AFF2|p.T833Qfs*26|1|0.6|ENSG00000155966|chrX:148956540-148956540|C/-|frameshift_variant'] 28439 21037 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 87.928 2 -1.343832155645931 0.39551292783850367 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 16692 4457 EERQDIERYSK True NCI_RA007_Epitope_Rep1 1451.7004704518697 1451.6993699358602 21.445 2 -1.3438463547551769 0.39551292783850367 1.0 ['ENSG00000113356|ENST00000651687|POLR3G'] 5099 6297 ALLGFDVQ True PC9_epitope_Rep1 861.45961849833 861.45852993586 29.034 2 -1.3439342628659452 0.39551542693135616 1.0 ['ENST00000383742.7_2_3:46712476-46718839:-|nuORF', 'nc|ENSG00000178038|Q60I27-3|ALS2CL', 'nc|ENSG00000178038|Q60I27-2|ALS2CL', 'ENSG00000178038|ENST00000318962|ALS2CL', 'ENST00000486301.5_1_3:46718337-46718925:-|nuORF', 'ENST00000434140.5_2_3:46717393-46723043:-|nuORF'] 116730 12746 TVDLIKYTM True H1975_Epitope_Rep3 1082.56818297114 1082.5670899358602 54.241 2 -1.3439401352121492 0.39551542693135616 1.0 ['ENSG00000072364|ENST00000265343|AFF4'] 41727 9774 IALIRAEAA True H1975_Epitope_Rep3 926.5549158654999 926.55380993586 42.618 2 -1.3440095362705264 0.3955226557922053 1.0 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1', 'nc|ENSG00000187778|Q96EZ8-4|MCRS1', 'ENST00000552596.1_1_12:49952428-49952862:-|nuORF', 'ENST00000548646.5_1_12:49952428-49953240:-|nuORF'] 82277 16606 PPGKVVTV True PC9_epitope_Rep4 795.48543932335 795.48434993586 71.85 2 -1.3441509842440003 0.3955251545627399 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 44593 12475 ILQHHAAA True NCI_RA007_Epitope_Rep5 859.46643521427 859.46532993586 54.643 2 -1.3441605204087554 0.3955251545627399 1.0 ['nc|ENSG00000186566|Q9UKJ3-2|GPATCH8', 'ENSG00000186566|ENST00000591680|GPATCH8'] 40676 22731 HRQVDHFFCEV True H1975_Epitope_Rep1 1415.64045347795 1415.63934993586 94.545 2 -1.3441901445295326 0.3955323830479288 1.0 ['nc|ENSG00000204701|O76001|OR2J3', 'ENSG00000204701|ENST00000641151|OR2J3'] 53722 17130 KSKTLLHL True PC9_epitope_Rep2 938.5913013742199 938.59020993586 71.139 2 -1.344304290193431 0.39555156950672643 1.0 ['ENST00000537403.5_1_14:39524417-39524492:-|nuORF'] 82271 19743 PPGGGSGG True NCI_RA007_Epitope_Rep3 584.25543938852 584.25489496793 86.067 1 -1.3444108249947213 0.39557325297747165 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.P569L|1|0.27|ENSG00000169047|chr2:226797033-226797033|G/A|missense_variant'] 62860 9802 LLMMEDTLW True PC9_epitope_Rep1 1150.54025397114 1150.53914993586 42.565 2 -1.344426325219594 0.39557325297747165 1.0 ['nc|ENSG00000104728|O15013-7|ARHGEF10', 'nc|ENSG00000104728|O15013-4|ARHGEF10', 'ENSG00000104728|ENST00000349830|ARHGEF10', 'nc|ENSG00000104728|O15013-6|ARHGEF10', 'nc|ENSG00000104728|O15013|ARHGEF10'] 111730 17950 TIGVDFTVRSL True PC9_epitope_Rep2 1206.66083748602 1206.6597499358602 74.35 2 -1.3444435208668546 0.39557325297747165 1.0 ['RAB19|p.I82Sfs*34|1|0.09|ENSG00000146955|chr7:140411916-140411916|A/-|frameshift_variant', 'ENSG00000146955|ENST00000537763|RAB19', 'nc|ENSG00000146955|A4D1S5-2|RAB19'] 32358 12988 GFGGGGYGGF True NCI_RA007_Epitope_Rep4 874.3609670862198 874.3604149679301 57.059 1 -1.3444750942254597 0.3956163531789212 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'ENSG00000215301|ENST00000644876|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'ENSG00000067048|ENST00000336079|DDX3Y'] 16579 13833 EEMLLKHLQRM True PC9_epitope_Rep6 1426.7424760183399 1426.7413699358601 65.016 2 -1.3445581736285288 0.3956355374865479 1.0 ['ENSG00000064115|ENST00000343028|TM7SF3'] 132861 3575 VVLLRLKL True PC9_epitope_Rep1 952.6797224558 952.67862993586 18.676 2 -1.3446591154912453 0.3956499904342835 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 23153 11230 EVKVKCVL True NCI_RA007_Epitope_Rep3 916.5415743004799 916.54046993586 51.282 2 -1.3446602009341013 0.3956499904342835 1.0 ['ENST00000397766.3_1_15:34394281-34394365:+|nuORF'] 131241 23614 VTFAFSCT True H1975_Epitope_Rep1 874.38949033318 874.38894496793 98.064 1 -1.3447310672842177 0.39565721664893044 1.0 ['ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A', 'nc|ENSG00000188092|B7ZAQ6-4|GPR89A', 'ENST00000532574.5_1_1:145811866-145826998:-|nuORF'] 82936 15647 PSDNPHVL True PC9_epitope_Rep2 877.42938099921 877.42828993586 65.461 2 -1.344848054070241 0.39567639955042205 1.0 ['ENSG00000145623|ENST00000274276|OSMR'] 80640 23691 PGSIRKPPN True PC9_epitope_Rep1 964.54541381096 964.54430993586 95.921 2 -1.3448755180313052 0.3956836252764991 1.0 ['ENSG00000132478|ENST00000589666|UNK'] 66145 14851 LSENQHKKR True PC9_epitope_Rep2 1138.62070400954 1138.6196099358601 62.389 2 -1.3450412497745243 0.39570057030810984 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 139896 12423 YPTHPLHGVH True PC9_epitope_Rep2 1156.5777765684 1156.57666993586 53.093 2 -1.3450417768567993 0.39570057030810984 1.0 ['nc|ENSG00000165655|Q96F45-2|ZNF503', 'ENSG00000165655|ENST00000372524|ZNF503'] 103035 5317 SPFSFELCLCL True NCI_RA007_Epitope_Rep4 1257.57736775585 1257.57571490379 27.014 3 -1.3450581112518045 0.39570057030810984 1.0 ['MAS1L|p.V159L|1|0.05|ENSG00000204687|chr6:29487428-29487428|C/A|missense_variant'] 58548 16406 LEQLERIGL True PC9_epitope_Rep2 1069.6131590176099 1069.61206993586 68.349 2 -1.3450648902786122 0.39570057030810984 1.0 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF', 'ENST00000579878.1_1_17:30219240-30228646:-|nuORF'] 109431 4995 TDGECVFPFHY True H1975_Epitope_Rep3 1313.5386737480098 1313.5375699358601 24.342 2 -1.3451970127381614 0.3957317073170732 1.0 ['ENSG00000188334|ENST00000344839|BSPH1'] 36395 12167 GVFLFFVL True PC9_epitope_Rep1 940.5422259234799 940.54112993586 51.665 2 -1.345287844799137 0.39573420052126923 1.0 ['ILDR2|p.I259Sfs*15|1|0.12|ENSG00000143195|chr1:166935407-166935407|G/-|frameshift_variant', 'ILDR2|p.G255Afs*19|1|0.12|ENSG00000143195|chr1:166935417-166935417|C/-|frameshift_variant', 'ENSG00000143195|ENST00000271417|ILDR2'] 35557 5137 GSVPSIRRNFH True PC9_epitope_Rep3 1268.67380221156 1268.67214490379 24.845 3 -1.3453379109705923 0.39573420052126923 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 16104 9428 EEAEVFIVKM True NCI_RA007_Epitope_Rep1 1193.6002113754098 1193.59910993586 40.667 2 -1.3454119680254206 0.39575836551221205 1.0 ['ENSG00000119707|ENST00000261973|RBM25'] 48635 26535 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 110.79 3 -1.345437695745247 0.39575836551221205 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 11189 4129 DDSVPRYHAV True PC9_epitope_Rep4 1157.54653600977 1157.54488490379 22.203 3 -1.3456042576967584 0.39575836551221205 1.0 ['nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6', 'ENST00000409532.5_2_2:173366626-173368977:+|nuORF'] 42369 8564 IEATPERIK True H1975_Epitope_Rep1 1055.5975089534697 1055.59640993586 37.867 2 -1.3456080504771102 0.39575836551221205 1.0 ['nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 97904 7648 SEMFNIPWDNP True H1975_Epitope_Rep1 1348.5757875327197 1348.57468993586 34.396 2 -1.3456609267604207 0.39575836551221205 1.0 ['ENSG00000155761|ENST00000336338|SPAG17', 'SPAG17|p.Q1045Afs*3|1|0.19|ENSG00000155761|chr1:118040763-118040764|-/C|frameshift_variant', 'SPAG17|p.V1065*|1|0.21|ENSG00000155761|chr1:118039418-118039418|C/-|frameshift_variant'] 98433 5233 SFFFAYVGI True PC9_epitope_Rep4 1049.5222187548898 1049.52112993586 26.828 2 -1.3457900087291341 0.39580394500896593 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 141591 18765 YTQQEVREL True PC9_epitope_Rep5 1164.5775017848798 1164.57640993586 77.19 2 -1.3458647792662828 0.39580394500896593 1.0 ['ENSG00000112367|ENST00000230124|FIG4'] 32063 5460 GESAVAEDPTW True H1975_Epitope_Rep3 1160.49858275784 1160.4974899358601 26.058 2 -1.3458706371893425 0.39580394500896593 1.0 ['nc|nan|A6NN90|C2orf81', 'ENSG00000284308|ENST00000684111|C2orf81'] 100503 12412 SLARDCTLF True PC9_epitope_Rep1 1024.5011660404798 1024.5000699358602 52.605 2 -1.345922630885455 0.39580444656944774 1.0 ['ENSG00000182791|ENST00000333861|CCDC87', 'CCDC87|p.K420Nfs*10|1|0.25|ENSG00000182791|chr11:66591759-66591759|G/-|frameshift_variant', 'CCDC87|p.S300Rfs*36|1|0.28|ENSG00000182791|chr11:66592119-66592119|G/-|frameshift_variant'] 75445 18330 NIYVEVED True PC9_epitope_Rep6 979.4498416602698 979.44874993586 83.148 2 -1.346052719048748 0.39580444656944774 1.0 ['nc|ENSG00000027869|Q9NP31-3|SH2D2A', 'nc|ENSG00000027869|Q9NP31-4|SH2D2A', 'ENSG00000027869|ENST00000368199|SH2D2A', 'nc|ENSG00000027869|Q9NP31-2|SH2D2A'] 12512 12101 DKIQQMNPP True PC9_epitope_Rep1 1069.52262976105 1069.5215299358601 51.406 2 -1.3460711758158592 0.39580444656944774 1.0 ['ENSG00000144821|ENST00000693548|MYH15'] 129401 11248 VRELYRAWYRE True H1975_Epitope_Rep1 1539.7946456202296 1539.79354993586 48.241 2 -1.346158072409698 0.39580444656944774 1.0 ['ENSG00000184983|ENST00000498737|NDUFA6'] 20683 10694 EQDQESSEEEE True H1975_Epitope_Rep2 1337.47427805445 1337.47318993586 46.158 2 -1.3461626224805672 0.39580444656944774 1.0 ['ENSG00000114853|ENST00000232974|ZBTB47'] 113868 23689 TNLLSQPRGI True PC9_epitope_Rep5 1097.61930702721 1097.61820993586 96.098 2 -1.3461715506393022 0.39580444656944774 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant'] 119767 14292 VAYQIKRL True PC9_epitope_Rep6 989.6022004110898 989.60110993586 66.869 2 -1.346213016084634 0.39580444656944774 1.0 ['ENSG00000109323|ENST00000647097|MANBA', 'MANBA|p.H446Y|1|0.05|ENSG00000109323|chr4:102664834-102664834|G/A|missense_variant', 'MANBA|p.E435Q|1|0.37|ENSG00000109323|chr4:102668977-102668977|C/G|missense_variant'] 75357 10916 NISIFFLQNQF True NCI_RA007_Epitope_Rep2 1369.7030366511697 1369.70192993586 47.068 2 -1.3462324414645028 0.39580444656944774 1.0 ['ENST00000301067.11_1_12:49414036-49414432:-|nuORF'] 30737 20808 GALLAMIYNK True PC9_epitope_Rep3 1092.60015180576 1092.5990499358602 85.309 2 -1.3463293379530625 0.39580444656944774 1.0 ['nc|ENSG00000069431|O60706|ABCC9', 'ENSG00000069431|ENST00000261200|ABCC9', 'ABCC9|p.S625Lfs*15|1|0.34|ENSG00000069431|chr12:21887854-21887863|AAAGGAAGCG/-|frameshift_variant'] 20511 4944 EPNSRYTYKLE True NCI_RA007_Epitope_Rep2 1398.6779441021401 1398.6768499358602 23.852 2 -1.3463798145398727 0.39580444656944774 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A'] 3548 9503 AGLTMRGWI True PC9_epitope_Rep6 1003.5273212186698 1003.52622993586 46.812 2 -1.346405121139774 0.39581166851938177 1.0 ['PGM5|p.E381Kfs*67|1|0.31|ENSG00000154330|chr9:68465187-68465187|G/-|frameshift_variant'] 109378 27216 TCWEKICP True PC9_epitope_Rep3 978.4303095993399 978.42920993586 112.0 2 -1.3465934737007557 0.39586670172838323 1.0 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6'] 135625 26693 WLKVKHLVNL True PC9_epitope_Rep2 1248.7706627185198 1248.76956993586 109.46 2 -1.3466695502991446 0.3958691910499139 1.0 ['nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN3A|p.F1179Sfs*4|1|0.26|ENSG00000153253|chr2:165113951-165113951|T/-|frameshift_variant', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF'] 122853 4816 VGGWWGGW True PC9_epitope_Rep2 903.4027723285499 903.40166993586 23.893 2 -1.3466841197385546 0.3958691910499139 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 101532 13533 SLLFVWLRF True PC9_epitope_Rep1 1179.68045073179 1179.67879490379 56.91 3 -1.3468409509996913 0.3959600788860336 1.0 ['ENST00000554067.1_2_14:55657878-55658290:-|nuORF'] 56649 16170 LDIQHVLDKL True H1975_Epitope_Rep3 1192.6815729306 1192.6804699358602 67.655 2 -1.3471057485512272 0.3960701351787443 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 14064 17354 DRPNLELLRAL True NCI_RA007_Epitope_Rep5 1308.75138382592 1308.75028993586 73.532 2 -1.3471740526608553 0.3960701351787443 1.0 ['nc|ENSG00000005379|O95153-2|TSPOAP1', 'ENSG00000005379|ENST00000343736|TSPOAP1', 'nc|ENSG00000005379|O95153-3|TSPOAP1'] 36107 12064 GVAGTLIR True PC9_epitope_Rep1 785.4759372688101 785.47484993586 51.265 2 -1.3472432261916014 0.39611592470869433 1.0 ['ENST00000254846.9_1_17:7748661-7748985:+|nuORF'] 82165 15976 PNNLCHSG True NCI_RA007_Epitope_Rep5 840.3548361599601 840.35372993586 68.177 2 -1.3472723928631003 0.39611592470869433 1.0 ['nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'nc|ENSG00000103342|P15170|GSPT1'] 64373 20483 LPLLRVPLL True PC9_epitope_Rep6 1032.70593720364 1032.70484993586 91.508 2 -1.3473993789120493 0.39611592470869433 1.0 ['ENST00000296597.9_1_5:60240975-60241137:+|nuORF'] 62756 17422 LLLPSCPEP True H1975_Epitope_Rep2 967.50485443859 967.50374993586 72.306 2 -1.347399558912657 0.39611592470869433 1.0 ['nc|ENSG00000160961|Q96JL9-2|ZNF333', 'ENST00000392987.7_1_19:14804303-14817025:+|nuORF'] 122336 5723 VGDACDNC True NCI_RA007_Epitope_Rep1 795.25273916019 795.2521949679301 26.317 1 -1.3475159944299966 0.39611592470869433 1.0 ['CON__ENSEMBL:ENSBTAP00000006074'] 76082 18429 NMILVQIL True NCI_RA007_Epitope_Rep5 942.55722436462 942.55612993586 77.71 2 -1.3475224731394293 0.39611592470869433 1.0 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 90453 8394 REIWHYQYLSW True PC9_epitope_Rep2 1579.75719748235 1579.7555549037902 37.66 3 -1.3475552847335797 0.39611592470869433 1.0 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 115862 12447 TSEDPSKLEAK True NCI_RA007_Epitope_Rep5 1203.5982967991101 1203.5971899358601 54.534 2 -1.347590413764773 0.39611592470869433 1.0 ['ENSG00000131203|ENST00000518237|IDO1'] 100469 15415 SLALQAEK True PC9_epitope_Rep5 858.4810822188999 858.48053496793 64.303 1 -1.3477318056867715 0.39614704335771306 1.0 ['ENSG00000163154|ENST00000368910|TNFAIP8L2'] 118876 9170 VACAQRQV True PC9_epitope_Rep6 873.4490708979698 873.44796993586 45.399 2 -1.3478685584020829 0.3962020626934522 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 58146 23461 LEKQDKTVRKL True PC9_epitope_Rep1 1356.8088987020399 1356.8078099358602 95.028 2 -1.347883204286528 0.3962331795693014 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 170 11340 AADTVKEL True NCI_RA007_Epitope_Rep3 845.4494477374499 845.44834993586 51.721 2 -1.3480270961548102 0.3963001469902843 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 122652 14457 VGGAVRRPWPP True PC9_epitope_Rep4 1190.6672602791398 1190.6656049037902 63.519 3 -1.348058765921338 0.39630736137667305 1.0 ['ENST00000426158.1_3_7:89841229-89854412:+|nuORF'] 86670 18845 QLIDEKVG True NCI_RA007_Epitope_Rep5 900.4916469026 900.49054993586 79.333 2 -1.3481202025205807 0.396357639635764 1.0 ['ENSG00000107164|ENST00000319725|FUBP3', 'ENST00000487406.2_1_9:133495824-133506568:+|nuORF'] 120311 14133 VEDVFHKAQ True PC9_epitope_Rep2 1071.53490869691 1071.53380993586 59.634 2 -1.3481952199905602 0.396357639635764 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 129411 20316 VRFKRNKHH True PC9_epitope_Rep6 1220.70029174292 1220.6991899358602 90.851 2 -1.348233157750011 0.3963768029348852 1.0 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 56307 13017 LDASERVQL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 54.94 2 -1.3483073461245194 0.3963912290135628 1.0 ['ENSG00000109061|ENST00000226207|MYH1', 'GAS7-MYH1|1|fusion', 'MYH8|p.L1709I|1|0.1|ENSG00000133020|chr17:10394290-10394290|G/T|missense_variant', 'MYH2|p.E1711D|1|0.08|ENSG00000125414|chr17:10524508-10524508|C/G|missense_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'ENSG00000264424|ENST00000255381|MYH4'] 119438 9625 VAQSTRIIY True PC9_epitope_Rep1 1049.58694426977 1049.58584993586 41.878 2 -1.3484108445808118 0.3963912290135628 1.0 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 106979 13862 SVEHLEEK True PC9_epitope_Rep5 969.4767251144499 969.47562993586 58.341 2 -1.3484469114521256 0.39639844179432643 1.0 ['ENST00000456229.1_1_7:91506204-91509986:-|nuORF'] 16250 12750 EEETLEKHLRP True H1975_Epitope_Rep1 1379.7044932031497 1379.70338993586 54.103 2 -1.348543240972876 0.396427291193691 1.0 ['ENSG00000225830|ENST00000355832|ERCC6'] 135660 25523 WLMVKIFL True PC9_epitope_Rep5 1048.61434531792 1048.6137749679299 103.44 1 -1.3487095352098424 0.396427291193691 1.0 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5'] 65824 5750 LSDKTLYKYFL True NCI_RA007_Epitope_Rep2 1389.75440351769 1389.75274490379 26.983 3 -1.3487162636876242 0.396427291193691 1.0 ['ENSG00000152822|ENST00000282753|GRM1', 'nc|ENSG00000152822|Q13255-2|GRM1', 'nc|ENSG00000152822|Q13255-3|GRM1', 'ENST00000507005.1_1_6:146350692-146480734:+|nuORF'] 815 17352 ACCVFMLLLP True H1975_Epitope_Rep3 1108.54831655704 1108.54720993586 72.399 2 -1.348747732471564 0.396427291193691 1.0 ['ENSG00000185372|ENST00000641551|OR2V1'] 74189 7557 NEERQDTDMQ True H1975_Epitope_Rep1 1264.498993764 1264.49788993586 34.06 2 -1.3488027634453044 0.39643450311264056 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000492674.1_1_7:99809286-99811635:+|nuORF'] 91224 24439 RGERGRYR True H1975_Epitope_Rep3 1048.5638578397597 1048.5627699358602 101.73 2 -1.3488836557470287 0.3964608748640866 1.0 ['nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENSG00000083896|ENST00000344157|YTHDC1'] 48836 4461 KDVQQYILHRL True H1975_Epitope_Rep3 1411.7935829910698 1411.79194490379 22.279 3 -1.3489000434526424 0.3964608748640866 1.0 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 13093 10812 DLQGRFEL True PC9_epitope_Rep6 976.4977949121999 976.49668993586 52.436 2 -1.3489313157985088 0.39647529721010816 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 68847 7073 LTMETLFLI True H1975_Epitope_Rep1 1079.59366944299 1079.5925699358602 32.233 2 -1.3489460531571444 0.39647529721010816 1.0 ['ENST00000288985.11_1_9:98643411-98643471:+|nuORF'] 39391 11354 HKLFWYTRRPE True NCI_RA007_Epitope_Rep1 1531.8048163811097 1531.80370993586 48.137 2 -1.3489506683615613 0.396489718866865 1.0 ['ENST00000367456.5_1_6:149700636-149718820:+|nuORF'] 46611 13194 ITDFRKSHT True PC9_epitope_Rep2 1103.5723568347898 1103.5712499358601 56.027 2 -1.3489836268033453 0.396489718866865 1.0 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 120056 7457 VDSSQFSEY True H1975_Epitope_Rep1 1060.43491987212 1060.43382993586 33.68 2 -1.3490223289465078 0.3964969294367846 1.0 ['ENSG00000134504|ENST00000580059|KCTD1', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15', 'ENST00000284006.10_1_19:34303676-34303850:+|nuORF', 'ENST00000577255.1_1_18:24035709-24035892:-|nuORF'] 64482 6323 LPQGRKGA True H1975_Epitope_Rep3 825.4820852784098 825.48098993586 29.315 2 -1.3491120840712063 0.39652329749103943 1.0 ['nc|ENSG00000162981|Q96KN4-2|LRATD1'] 32089 5645 GESRGTKDLP True H1975_Epitope_Rep3 1058.5356369729 1058.53452993586 26.744 2 -1.349129791780256 0.39652329749103943 1.0 ['nc|ENSG00000213689|Q9NSU2-2|TREX1', 'ENSG00000213689|ENST00000625293|TREX1', 'nc|ENSG00000213689|Q9NSU2-1|TREX1'] 122854 4907 VGGWWGGW True PC9_epitope_Rep2 903.4027723285499 903.40166993586 24.241 2 -1.3491647766263108 0.3965282423779031 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 16049 9933 EDWQFVNDY True H1975_Epitope_Rep2 1214.48801807414 1214.4869299358602 43.197 2 -1.3492037826917864 0.3965282423779031 1.0 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF', 'WDR19|p.H891Tfs*26|1|0.25|ENSG00000157796|chr4:39245391-39245391|C/-|frameshift_variant'] 66868 15443 LSNHFLFYKLE True H1975_Epitope_Rep1 1409.73433677945 1409.7332299358602 64.671 2 -1.3492305630601225 0.3965282423779031 1.0 ['ENST00000304916.3_1_8:127565141-127565240:-|nuORF'] 54120 24292 KVMVPQRRL True PC9_epitope_Rep3 1125.6804678151298 1125.67882490379 98.752 3 -1.3492800822404851 0.3965282423779031 1.0 ['STAB2|p.L1127M|1|0.08|ENSG00000136011|chr12:103695553-103695553|C/A|missense_variant'] 108884 5755 TAALQEGLR True H1975_Epitope_Rep1 957.5243440132099 957.52324993586 27.207 2 -1.349371327906685 0.3965712920375127 1.0 ['ENSG00000160282|ENST00000397746|FTCD', 'nc|ENSG00000160282|O95954-2|FTCD'] 125909 8138 VLCFVLCPRAK True H1975_Epitope_Rep3 1247.6882556175099 1247.6871499358601 36.28 2 -1.3494304961577142 0.3965904475186964 1.0 ['ENST00000517417.2_1_5:140892285-140892435:+|nuORF'] 77921 23053 NVIRVRRY True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 93.474 2 -1.3496016219456168 0.39663843461432785 1.0 ['nc|ENSG00000069431|O60706|ABCC9', 'ENSG00000069431|ENST00000261200|ABCC9', 'ABCC9|p.S625Lfs*15|1|0.34|ENSG00000069431|chr12:21887854-21887863|AAAGGAAGCG/-|frameshift_variant', 'ABCC9|p.Y290*|1|0.14|ENSG00000069431|chr12:21913013-21913013|G/-|frameshift_variant', 'nc|ENSG00000006071|Q09428-2|ABCC8', 'ENSG00000006071|ENST00000389817|ABCC8'] 141604 12196 YTRPSYAQYYP True H1975_Epitope_Rep2 1407.64591569787 1407.6448099358602 51.995 2 -1.3496023356497318 0.39663843461432785 1.0 ['ENSG00000164080|ENST00000684192|RAD54L2', 'ENST00000461680.1_1_3:51673299-51697433:+|nuORF', 'ENST00000487093.5_1_3:51669772-51697433:+|nuORF'] 137780 12759 YEQEKYTLQRE True H1975_Epitope_Rep1 1485.7099725064097 1485.70886993586 54.139 2 -1.349655723137161 0.39663843461432785 1.0 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'SPDL1|p.M176Yfs*6|1|0.06|ENSG00000040275|chr5:169593542-169593543|-/TATTTTCTTTCTAA|frameshift_variant', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 113949 15124 TPAERQLVF True PC9_epitope_Rep5 1059.5712942056298 1059.57018993586 63.18 2 -1.349672488474472 0.39663843461432785 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 123988 16859 VGSDPVLM True NCI_RA007_Epitope_Rep3 816.40514039732 816.40459496793 74.186 1 -1.3496745440809206 0.39663843461432785 1.0 ['nc|ENSG00000114423|Q13191-3|CBLB', 'nc|ENSG00000114423|Q13191-2|CBLB', 'ENSG00000114423|ENST00000394030|CBLB'] 79766 18898 PECCPGEM True H1975_Epitope_Rep3 864.2815967603199 864.28048993586 79.261 2 -1.3497265766683082 0.3966528496171443 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 59502 20018 LFRKQKHL True PC9_epitope_Rep5 1068.6556329662799 1068.6545299358602 82.051 2 -1.349729459632597 0.3966528496171443 1.0 ['AVL9|p.Q440K|1|0.14|ENSG00000105778|chr7:32570122-32570122|C/A|missense_variant'] 46398 5052 ISSEQHGI True PC9_epitope_Rep2 869.42429561877 869.42318993586 24.803 2 -1.3497533933654717 0.39666005686026234 1.0 ['ENST00000450443.1_1_2:173368840-173377133:-|nuORF'] 94772 11934 RSLQEMFSGTR True NCI_RA007_Epitope_Rep5 1310.6401191247799 1310.6390299358602 52.56 2 -1.3498386343017346 0.3966792092217643 1.0 ['ENST00000593183.2_1_19:16013215-16014022:-|nuORF'] 100010 13989 SIQEIQRVL True PC9_epitope_Rep4 1084.62405805448 1084.62296993586 61.715 2 -1.3500423201829328 0.3967105027412477 1.0 ['nc|ENSG00000205683|Q92784-3|DPF3', 'nc|ENSG00000205683|Q92784-4|DPF3', 'nc|ENSG00000205683|Q92784-2|DPF3', 'nc|ENSG00000205683|Q92784-5|DPF3', 'ENSG00000205683|ENST00000556509|DPF3'] 85702 16216 QGWLQQLP True PC9_epitope_Rep6 968.50796567308 968.50686993586 74.729 2 -1.3500597903018159 0.3967105027412477 1.0 ['ENST00000519574.1_1_2:219125758-219128073:+|nuORF'] 53270 18191 KQIKQRERKNN True NCI_RA007_Epitope_Rep5 1440.8273427308397 1440.82624993586 76.781 2 -1.3500672794592203 0.3967105027412477 1.0 ['ENSG00000011454|ENST00000373647|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-3|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-2|RABGAP1'] 92686 22047 RNRKIHPK True PC9_epitope_Rep4 1047.6413798844699 1047.6402899358602 93.025 2 -1.3500686165390485 0.3967105027412477 1.0 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|10|1|sense'] 16352 6840 EEIFQDGERE True H1975_Epitope_Rep1 1250.54151019898 1250.54040993586 31.355 2 -1.350103980415764 0.3967105027412477 1.0 ['SUPT6H|p.G155R|1|0.23|ENSG00000109111|chr17:28675087-28675087|G/A|missense_variant'] 16014 7266 EDSTWERRQD True NCI_RA007_Epitope_Rep2 1320.5694562823198 1320.5683499358602 32.884 2 -1.3501061083906991 0.3967105027412477 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7'] 113521 15141 TLTKEKVPLER True H1975_Epitope_Rep1 1312.7714505641597 1312.7703499358602 63.497 2 -1.35017333607028 0.3967177086070567 1.0 ['NDUFAF7|p.N362Kfs*5|1|0.34|ENSG00000003509|chr2:37247598-37247599|-/A|frameshift_variant', 'ENSG00000003509|ENST00000002125|NDUFAF7', 'ENST00000474154.5_1_2:37458848-37468954:+|nuORF'] 114646 6941 TQEAEAEKPRK True H1975_Epitope_Rep1 1285.6626283911698 1285.66152993586 31.738 2 -1.350217868032481 0.3967249143007298 1.0 ['ENSG00000185864|ENST00000682606|NPIPB4', 'ENSG00000169203|ENST00000550665|NPIPB12', 'ENSG00000254206|ENST00000698511|NPIPB11', 'nc|ENSG00000243716|C9JG80|NPIPB4', 'ENSG00000198064|ENST00000697092|NPIPB13', 'ENSG00000243716|ENST00000424340|NPIPB5', 'nc|ENSG00000169246|Q92617|NPIPB3', 'nc|ENSG00000169246|Q92617-6|NPIPB3', 'nc|ENSG00000169246|Q92617-5|NPIPB3', 'ENSG00000169246|ENST00000542817|NPIPB3', 'nc|ENSG00000169246|Q92617-3|NPIPB3', 'nc|ENSG00000169246|Q92617-2|NPIPB3'] 82722 6943 PRARMPCSP True NCI_RA007_Epitope_Rep1 1013.48989016413 1013.4893749679301 31.011 1 -1.3502866526293404 0.39672738130785307 1.0 ['ENST00000587374.5_3_17:73845777-73851378:-|nuORF'] 99874 6297 SILQERVK True NCI_RA007_Epitope_Rep4 971.5763795860698 971.57528993586 30.826 2 -1.350301376573106 0.39672738130785307 1.0 ['ENSG00000079246|ENST00000392132|XRCC5', 'ENST00000493706.1_1_2:216990646-216992426:+|nuORF'] 118716 3779 TYTNYIFVL True NCI_RA007_Epitope_Rep2 1132.580461907 1132.57882490379 19.339 3 -1.350339509408734 0.3967298481971168 1.0 ['ENSG00000127249|ENST00000342695|ATP13A4', 'nc|ENSG00000127249|Q4VNC1-4|ATP13A4'] 136411 16888 WTVIQNRQD True H1975_Epitope_Rep2 1158.57817049122 1158.57652490379 70.205 3 -1.350355123977018 0.3967298481971168 1.0 ['ENSG00000171564|ENST00000302068|FGB', 'CON__P02676'] 29970 9024 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 41.368 3 -1.3503971002526403 0.3967489967513854 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 13625 16071 DPKKQLVRHRL True H1975_Epitope_Rep1 1388.8364508625598 1388.8353499358602 67.157 2 -1.3504067289214507 0.3967539292026943 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 128593 20847 VPTQPLLKAHP True PC9_epitope_Rep1 1199.70264272835 1199.7015499358602 85.014 2 -1.3505411156174556 0.3967539292026943 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 36528 22807 GVGQGPWP True H1975_Epitope_Rep1 796.3867879112399 796.38568993586 94.858 2 -1.35057558164831 0.3967539292026943 1.0 ['nc|ENSG00000128604|Q13568-5|IRF5', 'nc|ENSG00000128604|Q13568-4|IRF5', 'nc|ENSG00000128604|Q13568|IRF5', 'nc|ENSG00000128604|Q13568-3|IRF5', 'ENSG00000128604|ENST00000357234|IRF5'] 104381 23436 SQKFTSIRRVL True PC9_epitope_Rep3 1333.78301830737 1333.7813849037902 95.424 3 -1.350595848619199 0.3967539292026943 1.0 ['OTULIN|p.R124L|1|0.36|ENSG00000154124|chr5:14681510-14681510|G/T|missense_variant'] 36235 16175 GVDFEGTF True PC9_epitope_Rep1 870.37594844402 870.3753949679301 67.032 1 -1.3506520835159488 0.3967611336032389 1.0 ['CON__ENSEMBL:ENSBTAP00000006074', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'ENSG00000113296|ENST00000350881|THBS4', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 4379 10606 AIMVQSPMFD True H1975_Epitope_Rep1 1137.51985287973 1137.51927496793 45.75 1 -1.3507375596317484 0.3967635994506479 1.0 ['ENSG00000143799|ENST00000366794|PARP1'] 79918 23123 PEQRHEQHYRR True PC9_epitope_Rep3 1534.7501550393 1534.74904993586 94.211 2 -1.350747761526279 0.3967635994506479 1.0 ['ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF', 'ENST00000395136.6_2_1:70687096-70687432:+|nuORF'] 76122 1353 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 7.4874 3 -1.3508379623114 0.3967781997086289 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 10649 15298 CPMLQNLA True NCI_RA007_Epitope_Rep4 888.41974491564 888.41864993586 66.496 2 -1.3508642137498144 0.3967781997086289 1.0 ['ENST00000218789.9_3_13:111957024-111957249:+|nuORF'] 142028 13129 YVLILKTILS True NCI_RA007_Epitope_Rep4 1161.73729690157 1161.73564490379 57.599 3 -1.3508670293041911 0.3967781997086289 1.0 ['OR51B5|p.V223I|1|0.06|ENSG00000167355|chr11:5342858-5342858|C/T|missense_variant', 'OR51A7|p.M260Ifs*13|1|0.26|ENSG00000176895|chr11:4908149-4908149|G/-|frameshift_variant', 'ENSG00000176895|ENST00000641490|OR51A7'] 140463 24193 YRHRRKYF True PC9_epitope_Rep4 1224.6628436050398 1224.6617499358601 101.54 2 -1.3508687445829632 0.3967781997086289 1.0 ['TPH2|p.Q189H|1|0.09|ENSG00000139287|chr12:71949614-71949614|G/T|missense_variant'] 42303 9587 IDWDSVLFDM True H1975_Epitope_Rep2 1239.5481758025498 1239.54706993586 41.851 2 -1.350926992082006 0.3967781997086289 1.0 ['DPP10|p.I589F|1|0.68|ENSG00000175497|chr2:115814857-115814857|A/T|missense_variant'] 141600 22711 YTRKWRRR True PC9_epitope_Rep4 1220.7002917429197 1220.6986349037902 95.583 3 -1.3509272795160323 0.3967781997086289 1.0 ['ENST00000306085.10_3_7:100730337-100730388:+|nuORF'] 23208 12423 EVLSWSQNFD True NCI_RA007_Epitope_Rep5 1223.54586730343 1223.5447699358601 54.443 2 -1.3509399105272075 0.3967781997086289 1.0 ['ENSG00000091844|ENST00000206262|RGS17'] 65186 7502 LQQQVQEQQLL True H1975_Epitope_Rep3 1353.7252286477299 1353.7241299358602 33.838 2 -1.3509838244814887 0.3967950708093521 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 112972 11673 TLLRKEEK True PC9_epitope_Rep6 1015.6025943339099 1015.60148993586 56.03 2 -1.3510820131798675 0.3967950708093521 1.0 ['ENST00000518143.1_1_8:77524032-77524245:-|nuORF'] 30718 9802 GALGRELEP True PC9_epitope_Rep2 940.4977949121999 940.49668993586 43.041 2 -1.3510825183446191 0.3967950708093521 1.0 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'DOT1L|p.D1250Efs*47|1|0.2|ENSG00000104885|chr19:2226271-2226293|CATCGGCCTGGCCAAGTCGGCGG/-|frameshift_variant', 'ENSG00000104885|ENST00000398665|DOT1L', 'ENST00000482433.1_1_19:2216201-2220604:+|nuORF'] 56144 14791 LAVLLPGRHP True NCI_RA007_Epitope_Rep1 1071.65529861311 1071.65420993586 61.592 2 -1.3510950791924776 0.3967950708093521 1.0 ['ENSG00000103671|ENST00000261884|TRIP4', 'ENST00000559565.5_1_15:64679957-64701921:+|nuORF', 'ENST00000561265.1_1_15:64686139-64701921:+|nuORF'] 84947 9114 QEEKDKLLK True H1975_Epitope_Rep3 1129.6342883850098 1129.6331899358602 40.046 2 -1.3512241805939378 0.3968214166308449 1.0 ['ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 130147 11552 VSDTEILKVA True PC9_epitope_Rep4 1073.5968402471299 1073.59574993586 52.195 2 -1.3512340096923612 0.3968214166308449 1.0 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 93556 21992 RQLLWVKSY True PC9_epitope_Rep4 1191.67642798051 1191.67477490379 92.813 3 -1.3513434130605326 0.3968597014925373 1.0 ['ENST00000246868.6_1_7:66452970-66453129:-|nuORF'] 139874 7228 YPQWRRIH True H1975_Epitope_Rep1 1154.6097454030198 1154.60864993586 32.813 2 -1.3513460002560151 0.3968597014925373 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 132856 17686 VVLLLDDL True NCI_RA007_Epitope_Rep1 898.53753446586 898.53642993586 72.932 2 -1.3513760359467368 0.39686690308175426 1.0 ['ENSG00000130702|ENST00000252999|LAMA5'] 59002 10176 LEVLEAEQNSL True H1975_Epitope_Rep1 1243.62959692739 1243.6284899358602 44.081 2 -1.3514638902963807 0.39688130574427183 1.0 ['ENST00000465425.1_1_19:36497111-36499583:-|nuORF', 'ENSG00000181392|ENST00000324444|SYNE4'] 99570 22038 SIELEIRKF True PC9_epitope_Rep3 1133.6444591458899 1133.6433699358602 90.067 2 -1.3514818089162661 0.39688130574427183 1.0 ['ENSG00000196422|ENST00000356818|PPP1R26', 'PPP1R26|p.L1109Cfs*45|1|0.24|ENSG00000196422|chr9:135487831-135487831|G/-|frameshift_variant', 'ENST00000416640.2_3_22:21698217-21699360:+|nuORF'] 4292 13634 AIHRSQPWFHR True H1975_Epitope_Rep1 1433.74288483089 1433.7417899358602 57.575 2 -1.3515826637255075 0.3969243260023402 1.0 ['GRB14|p.H442R|1|0.21|ENSG00000115290|chr2:164497065-164497065|T/C|missense_variant'] 102098 5632 SLRIQCSFTQ True NCI_RA007_Epitope_Rep4 1181.58629264677 1181.5846349037902 28.265 3 -1.3516266584671814 0.3969315264760313 1.0 ['ENST00000549928.5_1_12:60154925-60173457:+|nuORF', 'ENST00000549588.5_1_12:60098582-60157842:+|nuORF'] 21733 8696 ERTIHYYQRQI True PC9_epitope_Rep3 1505.77391017565 1505.77169987172 38.398 4 -1.3517386865210803 0.3969817448093891 1.0 ['ENST00000435712.1_1_10:131904549-131906742:+|nuORF'] 131447 13401 VTIRFENV True PC9_epitope_Rep5 976.5341804209199 976.53308993586 56.564 2 -1.3517678096547863 0.3969817448093891 1.0 ['nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 101227 10005 SLHKDRPVEP True PC9_epitope_Rep1 1176.6251206836398 1176.62402993586 43.35 2 -1.3517925613292503 0.39698894433964516 1.0 ['ENSG00000167165|ENST00000305139|UGT1A6', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000241635|ENST00000305208|UGT1A1', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENST00000450233.1_1_2:234678284-234681202:+|nuORF', 'DGKD-UGT1A4|1|fusion', 'DGKD-UGT1A4|3|fusion', 'nc|ENSG00000288705|P35504|UGT1A5'] 101956 15474 SLQEKLLTYYR True NCI_RA007_Epitope_Rep1 1412.76636518372 1412.76526993586 64.273 2 -1.3518214405404811 0.3969961436979907 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 121933 6376 VFSFRWFVHDF True NCI_RA007_Epitope_Rep3 1485.7193554216499 1485.71824993586 32.081 2 -1.3518803492831997 0.39704899245535286 1.0 ['XKR4|p.R614Efs*8|1|0.33|ENSG00000206579|chr8:55524113-55524113|C/-|frameshift_variant', 'ENSG00000206579|ENST00000327381|XKR4'] 56021 15765 LASNERIAL True PC9_epitope_Rep3 985.5556441414899 985.55454993586 65.799 2 -1.3519989978339733 0.39704899245535286 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 22993 5675 EVEYYYQRALE True H1975_Epitope_Rep1 1461.6776097489699 1461.6765099358602 26.896 2 -1.3520231077846403 0.39704899245535286 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 86667 8610 QLHTLQKLRMD True H1975_Epitope_Rep1 1381.75000392693 1381.7483549037902 38.045 3 -1.3520236421477632 0.39704899245535286 1.0 ['ENSG00000135090|ENST00000392533|TAOK3'] 56752 7024 LDLNSVLGK True NCI_RA007_Epitope_Rep4 957.5494961318899 957.54838993586 33.644 2 -1.3520395124586635 0.39704899245535286 1.0 ['ENSG00000106305|ENST00000223029|AIMP2'] 111928 11775 TIPPDYRLE True NCI_RA007_Epitope_Rep5 1102.5658744720201 1102.56476993586 51.951 2 -1.3521235723587008 0.39704899245535286 1.0 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST', 'ENST00000513666.5_1_5:96073558-96090478:+|nuORF'] 115291 24531 TRFLLLRETA True PC9_epitope_Rep4 1218.7084563847798 1218.70734993586 102.85 2 -1.352164259900712 0.39704899245535286 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'ENST00000506603.5_1_5:79058805-79095436:+|nuORF'] 9387 17396 AVSRDGFWPP True PC9_epitope_Rep1 1130.55089311422 1130.5497899358602 71.716 2 -1.3522175532759892 0.39704899245535286 1.0 ['ENST00000581471.2_1_18:5238694-5238925:+|nuORF'] 122076 13471 VFYVYHYLE True NCI_RA007_Epitope_Rep2 1231.59136094387 1231.59077496793 57.043 1 -1.35228234514115 0.39704899245535286 1.0 ['CON__Q1A7A4'] 3228 12394 AGEPVLPP True H1975_Epitope_Rep1 778.4225047136199 778.4219549679301 52.707 1 -1.3523256241738588 0.39705619023743866 1.0 ['ENST00000357802.6_1_22:42970741-42976277:-|nuORF', 'ENST00000421116.1_1_22:42973213-42976277:-|nuORF'] 140709 5944 YSADTLAHH True PC9_epitope_Rep4 1013.45665837621 1013.45556993586 29.793 2 -1.3524833763299404 0.39713518352730526 1.0 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 90979 5019 RFEDCTSPET True H1975_Epitope_Rep2 1183.4815527947098 1183.4804499358602 24.389 2 -1.3525462756686928 0.39713518352730526 1.0 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF'] 123382 5777 VGMKLTDV True PC9_epitope_Rep5 861.4629896266099 861.46188993586 27.215 2 -1.3526052064113216 0.39713518352730526 1.0 ['ENSG00000198796|ENST00000361673|ALPK2'] 691 11324 AAVAKKLG True PC9_epitope_Rep3 756.4857736765199 756.48466993586 48.564 2 -1.3526114217790337 0.39713518352730526 1.0 ['ENSG00000143318|ENST00000368078|CASQ1'] 46084 9756 ISHCTVKLRQ True PC9_epitope_Rep5 1183.64956160967 1183.64791490379 42.497 3 -1.352650752262726 0.39713518352730526 1.0 ['nc|ENSG00000100505|Q9C026-5|TRIM9', 'TRIM9|p.D613Efs*11|1|0.19|ENSG00000100505|chr14:50981868-50981869|-/T|frameshift_variant', 'nc|ENSG00000100505|Q9C026|TRIM9', 'ENSG00000100505|ENST00000684578|TRIM9', 'nc|ENSG00000100505|Q9C026-4|TRIM9'] 92662 14697 RNLTQSLAF True NCI_RA007_Epitope_Rep5 1048.56654317836 1048.5654499358602 63.202 2 -1.3526792961237701 0.39713518352730526 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 35302 23664 GRKGPVGG True NCI_RA007_Epitope_Rep3 726.4136713654199 726.41312496793 102.61 1 -1.3527277632979255 0.3971423796791444 1.0 ['ENST00000372663.8_1_9:131483181-131483412:-|nuORF'] 127131 14546 VLTQLQSV True H1975_Epitope_Rep3 886.51238234718 886.51128993586 61.319 2 -1.3528543279754361 0.39718538501020567 1.0 ['ENSG00000177045|ENST00000317578|SIX5', 'ENST00000560168.1_1_19:46268761-46269535:-|nuORF'] 117191 22681 TVLFGFLLL True PC9_epitope_Rep1 1021.6212045201698 1021.62010993586 92.046 2 -1.3529065543622247 0.3972117117654782 1.0 ['ENSG00000277399|ENST00000616987|GPR179', 'nc|ENSG00000277399|Q6PRD1|GPR179', 'GPR179|p.L899Cfs*70|1|0.5|ENSG00000277399|chr17:38330874-38330874|G/-|frameshift_variant'] 106586 7315 STNYFKSTLVH True NCI_RA007_Epitope_Rep2 1295.6510010783102 1295.64990993586 33.075 2 -1.3530050195780006 0.3972117117654782 1.0 ['ENST00000511691.1_1_5:138994522-139002983:+|nuORF'] 129549 21351 VRLIHLRLK True PC9_epitope_Rep5 1146.7713314248601 1146.76969490379 87.186 3 -1.3530785112461703 0.39723084268321796 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 76124 1782 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 9.8586 3 -1.3530824730584239 0.3972380372638188 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 114172 18684 TPKRRRLWR True NCI_RA007_Epitope_Rep3 1267.7737910363498 1267.7721449037901 81.726 3 -1.3531487580285009 0.39724768452210446 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 141153 3655 YSSWSWSWKR True NCI_RA007_Epitope_Rep5 1371.6360197205097 1371.6343649037901 20.052 3 -1.353178297930881 0.39724768452210446 1.0 ['ENST00000463527.5_1_1:155141918-155144917:-|nuORF'] 95536 16075 RWRRCRKCVWK True NCI_RA007_Epitope_Rep1 1575.85034418823 1575.8492499358601 66.632 2 -1.3532085663823472 0.39724768452210446 1.0 ['KCNF1|p.Q165R|1|0.18|ENSG00000162975|chr2:10912920-10912920|A/G|missense_variant'] 11188 4355 DDSVPRYHAV True PC9_epitope_Rep2 1157.54653600977 1157.54488490379 22.101 3 -1.3532606884250076 0.39726681386883095 1.0 ['nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6', 'ENST00000409532.5_2_2:173366626-173368977:+|nuORF'] 73984 5496 NDDFKALLQ True PC9_epitope_Rep4 1062.53457434374 1062.53346993586 27.899 2 -1.3533086688116391 0.39728120114098847 1.0 ['ENSG00000204131|ENST00000633930|NHSL2'] 48333 20944 IYSFAITLWQM True PC9_epitope_Rep5 1371.6896950861499 1371.6885899358601 85.619 2 -1.3533343436786143 0.39728120114098847 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 124116 8165 VGSPSLTR True PC9_epitope_Rep4 815.4501164437901 815.44900993586 38.862 2 -1.3534226233514022 0.39731471535982815 1.0 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 120141 16331 VEAIREALVDK True PC9_epitope_Rep6 1241.69795127073 1241.6968499358602 75.189 2 -1.3534604629226086 0.39731471535982815 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 68871 15157 LTMYRVWI True PC9_epitope_Rep4 1080.57902243836 1080.57792993586 66.229 2 -1.3534639004859341 0.39731471535982815 1.0 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 91598 21892 RILHVRNAPS True NCI_RA007_Epitope_Rep5 1161.67307393557 1161.67141490379 91.334 3 -1.3534798657846066 0.39732190808082013 1.0 ['ENSG00000087299|ENST00000267436|L2HGDH'] 31357 24451 GDQSERRW True NCI_RA007_Epitope_Rep1 1032.4737054226798 1032.4726099358602 101.31 2 -1.3535423913139617 0.3973529692572083 1.0 ['ENST00000420509.1_1_2:206949336-206950832:+|nuORF'] 64746 15519 LPYQRRYRERR True H1975_Epitope_Rep3 1591.88077528603 1591.8796699358602 65.11 2 -1.3536221550326037 0.3973601613499934 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 6211 8625 APPGELVSYPY True PC9_epitope_Rep4 1191.58119018299 1191.57955490379 40.658 3 -1.3538066782876121 0.39738251750754583 1.0 ['ENST00000393800.6_2_11:68228258-68287015:+|nuORF'] 30828 16530 GAPEIRMSKP True PC9_epitope_Rep6 1084.56991430664 1084.5688099358601 76.023 2 -1.3538372875001754 0.39738251750754583 1.0 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000028277|P09086-4|POU2F2', 'ENST00000530982.7_1_19:42603618-42636563:-|nuORF'] 123275 16755 VGLLLENMQR True H1975_Epitope_Rep1 1171.63832821963 1171.6372299358602 69.848 2 -1.3538670006258688 0.39738251750754583 1.0 ['DOCK11|p.I1178M|1|0.29|ENSG00000147251|chrX:118624601-118624601|A/G|missense_variant'] 111794 6082 TILATTAA True PC9_epitope_Rep2 760.43306939732 760.43196993586 28.787 2 -1.3539128128351978 0.39738251750754583 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 5482 6133 ALWEYEVY True PC9_epitope_Rep4 1071.49131254943 1071.49020993586 30.606 2 -1.35393425196598 0.39738251750754583 1.0 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 110314 10625 TESYPRVP True PC9_epitope_Rep3 947.4712458111899 947.47014993586 45.817 2 -1.3539381419962717 0.39738251750754583 1.0 ['nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENSG00000052841|ENST00000039989|TTC17'] 97773 8294 SEKDRSLERER True H1975_Epitope_Rep1 1403.7117038419099 1403.71060993586 36.835 2 -1.3539711882924368 0.39738251750754583 1.0 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.S1415Kfs*8|1|0.15|ENSG00000134982|chr5:112839835-112839836|-/A|frameshift_variant', 'APC|p.L1488Yfs*19|1|0.2|ENSG00000134982|chr5:112840055-112840055|T/-|frameshift_variant', 'APC|p.Q1062Vfs*63|1|0.23|ENSG00000134982|chr5:112838775-112838778|AAAC/-|frameshift_variant'] 70068 5826 LVNGILPQ True NCI_RA007_Epitope_Rep2 852.5069030439199 852.50580993586 27.28 2 -1.3540608018548472 0.39738251750754583 1.0 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-4|CCDC14', 'ENST00000495381.5_1_3:123633936-123674711:-|nuORF'] 60324 5158 LGSISPPK True NCI_RA007_Epitope_Rep4 797.46470387877 797.46360993586 26.365 2 -1.354129711574888 0.39738251750754583 1.0 ['ENST00000368357.7_1_6:126249952-126250054:+|nuORF'] 14983 13867 DYGPFRDVP True H1975_Epitope_Rep3 1064.49270953176 1064.4916099358602 58.648 2 -1.3541636292588564 0.39738251750754583 1.0 ['ENSG00000163902|ENST00000296255|RPN1'] 129628 17214 VRPGDRVAL True NCI_RA007_Epitope_Rep5 981.5719629119699 981.57086993586 72.985 2 -1.3542127104222819 0.39738251750754583 1.0 ['ENSG00000151240|ENST00000280886|DIP2C'] 3679 5831 AGQPAVDQ True NCI_RA007_Epitope_Rep2 784.37153176992 784.3709849679301 27.299 1 -1.354214875887111 0.39738251750754583 1.0 ['nc|ENSG00000175832|P43268-2|ETV4', 'ENSG00000175832|ENST00000319349|ETV4'] 22659 6329 ETPQTVPA True PC9_epitope_Rep3 841.4181476091699 841.4175949679301 29.374 1 -1.3542531247978338 0.39738251750754583 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 59715 21725 LGCPVPLGVK True PC9_epitope_Rep1 981.5681234014899 981.56702993586 88.396 2 -1.354294089776355 0.39738251750754583 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 15426 7917 EALARRQRHD True H1975_Epitope_Rep3 1250.65921477658 1250.65810993586 35.422 2 -1.3543016137386603 0.39738251750754583 1.0 ['ENST00000519973.5_1_8:23423709-23423784:+|nuORF'] 124699 4445 VGYSGNGR True PC9_epitope_Rep3 808.38276515996 808.38166993586 22.197 2 -1.3544009194095057 0.39738251750754583 1.0 ['ENST00000546516.5_1_16:705169-713132:+|nuORF', 'WDR90|p.S1458Vfs*13|1|0.09|ENSG00000161996|chr16:665739-665739|A/-|frameshift_variant', 'ENSG00000161996|ENST00000293879|WDR90', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'WDR90|p.R1329Lfs*9|1|0.39|ENSG00000161996|chr16:662009-662019|CGCGTGCCGGC/-|frameshift_variant', 'ENST00000547407.5_1_16:706280-710806:+|nuORF'] 8818 9565 AVDYLLYRLIF True H1975_Epitope_Rep1 1384.77547331544 1384.77436993586 41.715 2 -1.3544084344636167 0.39738251750754583 1.0 ['DCSTAMP|p.P332Qfs*7|1|0.12|ENSG00000164935|chr8:104349546-104349546|C/-|frameshift_variant', 'ENSG00000164935|ENST00000297581|DCSTAMP'] 56046 7780 LASTASIF True PC9_epitope_Rep5 808.43306939732 808.43196993586 34.871 2 -1.3544383400682243 0.39738251750754583 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 44618 12578 ILRKYGVP True PC9_epitope_Rep2 944.5807366905198 944.57962993586 53.689 2 -1.354491305088726 0.39738251750754583 1.0 ['ENSG00000173064|ENST00000682272|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4'] 43148 20211 IFDRELHRQTG True PC9_epitope_Rep2 1370.7054962626598 1370.70438993586 83.159 2 -1.3544958500019835 0.39738251750754583 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 61606 25599 LKLITTSVF True PC9_epitope_Rep5 1020.6219327961601 1020.62082993586 103.78 2 -1.3545132693813782 0.39738251750754583 1.0 ['ENST00000530930.1_1_10:126822157-126826602:-|nuORF'] 118589 20232 TYRCIKQVH True NCI_RA007_Epitope_Rep4 1146.5967977608198 1146.59515490379 87.545 3 -1.3545255633599604 0.39738251750754583 1.0 ['ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3'] 113539 12569 TLTQHLRTHRR True NCI_RA007_Epitope_Rep1 1417.8014623361698 1417.80036993586 52.87 2 -1.3545395738664305 0.39738251750754583 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-2|MZF1', 'ENST00000600004.1_1_19:59073441-59074896:-|nuORF'] 122016 15950 VFVLPFPV True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 68.077 2 -1.3545487811041612 0.39738251750754583 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 48060 6749 IYLYTAELYTT True H1975_Epitope_Rep1 1349.6754844906498 1349.67438993586 31.0 2 -1.3545512438837577 0.39738251750754583 1.0 ['SLC22A16|p.P470T|1|0.23|ENSG00000004809|chr6:110435865-110435865|G/T|missense_variant'] 11313 24036 DEKLEKFWIDF True PC9_epitope_Rep1 1468.7238316654 1468.7227299358601 97.265 2 -1.3545837713942874 0.39738251750754583 1.0 ['ENST00000480294.1_1_6:10891760-10930631:+|nuORF', 'ENSG00000153157|ENST00000283141|SYCP2L'] 44752 4175 ILYQRFQRVVF True NCI_RA007_Epitope_Rep1 1467.83505388023 1467.83341490379 20.325 3 -1.3546394717623464 0.39738251750754583 1.0 ['ENSG00000174175|ENST00000263686|SELP'] 29973 25704 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 106.41 3 -1.3546887919949626 0.39738251750754583 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 12470 11363 DIYSSFGFPR True PC9_epitope_Rep1 1187.56112344475 1187.56002993586 48.588 2 -1.35471899710422 0.3973897067595619 1.0 ['ENSG00000196611|ENST00000315274|MMP1'] 12517 5623 DKKDMRNN True PC9_epitope_Rep1 1019.48182757823 1019.48072993586 26.455 2 -1.354992182312897 0.3974089802929809 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1', 'nc|ENSG00000070729|Q14028-2|CNGB1'] 17014 6464 EGDHIGLT True NCI_RA007_Epitope_Rep5 840.39774651776 840.39664993586 31.527 2 -1.3550048882135752 0.3974089802929809 1.0 ['ENSG00000215041|ENST00000399464|NEURL4', 'nc|ENSG00000215041|Q96JN8-2|NEURL4', 'ENST00000571243.1_1_17:7228777-7229792:-|nuORF'] 36325 6637 GVELQAAA True PC9_epitope_Rep3 757.3970182417698 757.39592993586 30.552 2 -1.3550112360769047 0.3974089802929809 1.0 ['nc|ENSG00000140993|Q6NT04-2|TIGD7', 'ENSG00000140993|ENST00000396862|TIGD7'] 88944 5443 QVGRVEFRNY True H1975_Epitope_Rep3 1266.6469187573798 1266.64582993586 25.995 2 -1.3550720993981527 0.3974089802929809 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 37415 16983 GVTEKETK True NCI_RA007_Epitope_Rep5 890.4709114580199 890.4703649679301 72.085 1 -1.3551023592442717 0.3974089802929809 1.0 ['ENST00000361028.5_1_6:28348556-28348682:-|nuORF', 'ENST00000396827.3_1_6:28348556-28350043:-|nuORF'] 41793 7546 IASAGPAAAV True PC9_epitope_Rep2 826.45486747106 826.45376993586 34.391 2 -1.3551192086053976 0.3974089802929809 1.0 ['ENSG00000163735|ENST00000296027|CXCL5'] 84579 23888 QCEECQCWQH True H1975_Epitope_Rep3 1292.4372625379199 1292.43616993586 99.599 2 -1.3552596277505522 0.3974519557670973 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 131563 5858 VTLGCLATGYF True NCI_RA007_Epitope_Rep1 1143.5634319438698 1143.5623299358601 26.839 2 -1.355326166103407 0.3974591435047119 1.0 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE'] 30436 6181 GAEWEGRLE True H1975_Epitope_Rep2 1045.4828731240498 1045.48176993586 28.745 2 -1.355357415990096 0.3974615898463594 1.0 ['ENST00000469963.5_1_6:31697071-31697131:-|nuORF'] 58338 13143 LENALHTSAH True NCI_RA007_Epitope_Rep5 1091.5359713260702 1091.5348699358601 57.232 2 -1.3553595520245165 0.3974615898463594 1.0 ['ENSG00000140948|ENST00000671377|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14'] 145 5268 AADFYHLLGPH True PC9_epitope_Rep6 1239.6036569630699 1239.6020249037902 28.051 3 -1.3554329244990886 0.3974687772118378 1.0 ['PIK3CG|p.R90L|1|0.08|ENSG00000105851|chr7:106867830-106867830|G/T|missense_variant'] 33298 14873 GKPHGRGV True NCI_RA007_Epitope_Rep3 806.4511195033 806.45002993586 65.935 2 -1.3555311469155622 0.3974903382794981 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.W1179Cfs*25|1|0.06|ENSG00000003393|chr2:201723411-201723423|ATCTTGCCACATT/-|frameshift_variant', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 120123 6397 VEADTPTVPP True H1975_Epitope_Rep3 1024.5076908895599 1024.5065899358601 29.583 2 -1.3555714108945722 0.3974903382794981 1.0 ['ENSG00000131080|ENST00000374719|EDA2R', 'nc|ENSG00000131080|Q9HAV5-3|EDA2R', 'nc|ENSG00000131080|Q9HAV5-2|EDA2R'] 139055 21681 YLCWKKTL True NCI_RA007_Epitope_Rep4 1053.56812340149 1053.56702993586 94.0 2 -1.3555943520128209 0.3974903382794981 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2'] 68400 9577 LTESPSPDP True H1975_Epitope_Rep3 941.43419159613 941.43364496793 41.849 1 -1.3556035289286321 0.3974975249591469 1.0 ['ENST00000270645.7_1_19:50046533-50046872:+|nuORF'] 58868 13316 LESYRKKI True PC9_epitope_Rep5 1035.6076797143498 1035.60658993586 56.232 2 -1.3556622907942468 0.3975047114673537 1.0 ['ENST00000473067.1_1_2:37315561-37321362:+|nuORF', 'nc|ENSG00000152133|Q8N954-2|GPATCH11', 'ENSG00000152133|ENST00000674370|GPATCH11', 'nc|ENSG00000152133|Q8N954|GPATCH11'] 16616 8580 EEPRFQVP True PC9_epitope_Rep3 1000.4977949121998 1000.49668993586 37.954 2 -1.3557640680382277 0.3975238254273071 1.0 ['ENSG00000151790|ENST00000536354|TDO2', 'ENST00000510293.1_1_4:156835507-156839956:+|nuORF'] 57263 11476 LDYESRRLY True PC9_epitope_Rep5 1213.60913626633 1213.60802993586 49.139 2 -1.3558128922866384 0.3975262699633831 1.0 ['CDH10|p.E601Pfs*54|1|0.06|ENSG00000040731|chr5:24491641-24491651|AGCAGGGCTTC/-|frameshift_variant', 'CDH10|p.R700Nfs*23|1|0.04|ENSG00000040731|chr5:24487931-24487932|-/AAAACTACGAT|frameshift_variant', 'CDH10|p.Y730Tfs*19|1|0.15|ENSG00000040731|chr5:24487843-24487843|G/-|frameshift_variant', 'CDH10|p.T726Pfs*23|1|0.09|ENSG00000040731|chr5:24487855-24487855|G/-|frameshift_variant', 'ENSG00000040731|ENST00000264463|CDH10'] 125370 16034 VIRGGATR True PC9_epitope_Rep2 828.49298431528 828.49188993586 66.931 2 -1.3558370072848023 0.3975262699633831 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 60135 7616 LGMRDHPP True PC9_epitope_Rep6 921.4490708979699 921.44796993586 38.581 2 -1.3558667897593413 0.39753345578588295 1.0 ['ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 71458 9324 LYTQRSLL True PC9_epitope_Rep5 992.5654805492 992.56438993586 40.818 2 -1.3560445365003155 0.39754078809273924 1.0 ['ENSG00000131459|ENST00000253778|GFPT2', 'GFPT2|p.M544L|1|0.5|ENSG00000131459|chr5:180307220-180307220|T/A|missense_variant'] 11796 16423 DHERERFYIYR True NCI_RA007_Epitope_Rep2 1582.7640737679399 1582.7629699358602 68.609 2 -1.3560804585880046 0.39754078809273924 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 112198 16231 TKGRRPPHP True H1975_Epitope_Rep2 1044.59409533888 1044.59298993586 67.642 2 -1.3560881911196891 0.39754078809273924 1.0 ['ENST00000494016.1_1_11:61172069-61173437:-|nuORF'] 7849 5272 ASYKRAIG True PC9_epitope_Rep3 864.4817509252398 864.48064993586 25.357 2 -1.3560951089422941 0.39754078809273924 1.0 ['nc|ENSG00000141503|Q8N4C8-3|MINK1'] 63662 27537 LMRKDKKK True H1975_Epitope_Rep1 1045.6430196772499 1045.6419299358602 115.59 2 -1.35611021709975 0.39754078809273924 1.0 ['ENSG00000196284|ENST00000371459|SUPT3H', 'nc|ENSG00000196284|O75486-4|SUPT3H'] 116785 17354 TVDTTMYEMQ True H1975_Epitope_Rep2 1217.49442597753 1217.4933299358602 72.046 2 -1.3561459844428452 0.39754078809273924 1.0 ['ENSG00000179919|ENST00000326258|OR10A7'] 5033 20228 ALIQRWYRRYV True PC9_epitope_Rep4 1522.8521009267 1522.85100993586 85.947 2 -1.356207830519566 0.3975576014883366 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 23154 11518 EVKVKCVL True NCI_RA007_Epitope_Rep4 916.5415743004799 916.54046993586 51.25 2 -1.3562115829074286 0.3975576014883366 1.0 ['ENST00000397766.3_1_15:34394281-34394365:+|nuORF'] 87332 7064 QPRWWYWPMSW True NCI_RA007_Epitope_Rep2 1621.72887455953 1621.72723490379 32.1 3 -1.3562336033273907 0.3975576014883366 1.0 ['ENST00000584716.1_1_17:30815096-30816294:+|nuORF'] 81140 19000 PKGKAPLRARS True NCI_RA007_Epitope_Rep5 1179.72002412799 1179.7189299358602 79.941 2 -1.3563264690907009 0.3975576014883366 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 140100 20037 YQLSPNRHF True PC9_epitope_Rep5 1160.57269118796 1160.5715899358602 82.124 2 -1.3564450874418559 0.39759107984020037 1.0 ['ENSG00000253537|ENST00000518325|PCDHGA7', 'nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7'] 6674 5397 APYLPGGR True PC9_epitope_Rep1 829.44463714053 829.44354993586 25.593 2 -1.3564616726938787 0.39759107984020037 1.0 ['ENST00000234296.6_1_2:201822845-201828374:-|nuORF'] 67014 10086 LSPNLWKL True PC9_epitope_Rep3 969.5647522732099 969.56364993586 43.749 2 -1.3565310845839762 0.39759107984020037 1.0 ['ENST00000370397.7_1_10:101949201-101949339:-|nuORF'] 16070 8253 EDYYWMTGYP True H1975_Epitope_Rep2 1323.51179029383 1323.51068993586 36.699 2 -1.356948116442868 0.3977223944669688 1.0 ['ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF'] 66783 12473 LSLRQVSHPRR True H1975_Epitope_Rep3 1347.7847496428699 1347.78364993586 53.171 2 -1.3570183183510889 0.3977223944669688 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 38781 22188 HGVLICIQVL True NCI_RA007_Epitope_Rep5 1093.6317862872102 1093.6306899358601 92.489 2 -1.357018739970015 0.3977223944669688 1.0 ['ENSG00000083457|ENST00000263087|ITGAE'] 141117 15454 YSRIPRRSV True NCI_RA007_Epitope_Rep3 1132.6465248345598 1132.6454299358602 68.343 2 -1.3570189007111995 0.3977223944669688 1.0 ['ENST00000342963.2_1_7:5459527-5460374:+|nuORF'] 11048 19154 DAVCSTKVDCL True NCI_RA007_Epitope_Rep5 1152.51549577528 1152.5143899358602 80.548 2 -1.3570190572248924 0.3977223944669688 1.0 ['PIKFYVE|p.W1203C|1|0.18|ENSG00000115020|chr2:208326420-208326420|G/T|missense_variant'] 83052 15390 PSLGSLLPVAQ True H1975_Epitope_Rep2 1080.6179100448799 1080.6168099358601 64.356 2 -1.357113588952157 0.3977248336552908 1.0 ['nc|ENSG00000164488|Q5SW24-4|DACT2', 'ENSG00000164488|ENST00000366795|DACT2'] 12806 10522 DLFLDSLSD True NCI_RA007_Epitope_Rep5 1023.47605640811 1023.4754749679302 47.106 1 -1.3572333705513584 0.3977248336552908 1.0 ['ARMC7|p.E68D|1|0.43|ENSG00000125449|chr17:75110575-75110575|G/T|missense_variant'] 30415 6158 GAEPARPQAV True PC9_epitope_Rep1 994.5195929859399 994.51848993586 28.501 2 -1.357288197846049 0.39773445418231684 1.0 ['nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1', 'ENST00000547374.5_1_14:105676890-105677657:-|nuORF', 'ENST00000546997.1_1_14:105676890-105678659:-|nuORF', 'nc|ENSG00000185024|Q92994-9|BRF1', 'nc|ENSG00000185024|Q92994-3|BRF1', 'nc|ENSG00000185024|Q92994-7|BRF1', 'nc|ENSG00000185024|Q92994-8|BRF1'] 67681 10155 LSWESWRRWRR True NCI_RA007_Epitope_Rep2 1616.8436615013197 1616.8425699358602 44.089 2 -1.3573587439448627 0.39773445418231684 1.0 ['ENST00000377604.7_1_X:47004707-47006821:+|nuORF'] 138183 4673 YGPGKAVP True H1975_Epitope_Rep1 787.42283906679 787.42174993586 23.008 2 -1.3573606305024306 0.39773445418231684 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 57958 18070 LEGQEIQVKAK True PC9_epitope_Rep2 1241.69795127073 1241.6968499358602 74.808 2 -1.3574249702828143 0.3977488165786304 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8'] 140530 9974 YRNPEDYKR True PC9_epitope_Rep1 1239.5996342117899 1239.5979749037901 43.23 3 -1.357449535222557 0.3977488165786304 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 73140 20909 MRRRLRLRRD True NCI_RA007_Epitope_Rep1 1426.8527867163798 1426.85113490379 85.572 3 -1.3575020658889168 0.39776317828995217 1.0 ['ENSG00000237172|ENST00000449549|B3GNT9'] 74588 6671 NGFISESSSI True NCI_RA007_Epitope_Rep4 1039.48220441771 1039.48110993586 32.282 2 -1.35751463014347 0.39776317828995217 1.0 ['ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 124218 5433 VGTERWWL True PC9_epitope_Rep3 1045.53451477409 1045.5334099358602 25.969 2 -1.3575401371089133 0.3977703588887564 1.0 ['ENSG00000204007|ENST00000371763|GLT6D1'] 60325 4544 LGSISPPK True NCI_RA007_Epitope_Rep5 797.46470387877 797.46360993586 24.135 2 -1.357725154020504 0.3978253612475559 1.0 ['ENST00000368357.7_1_6:126249952-126250054:+|nuORF'] 85701 11066 QGWHPPLLR True NCI_RA007_Epitope_Rep2 1102.6035973934197 1102.60250993586 47.639 2 -1.357753312231022 0.3978253612475559 1.0 ['HHIPL1|p.V163Gfs*85|1|0.08|ENSG00000182218|chr14:99652452-99652453|-/T|frameshift_variant'] 67839 10999 LTALGLNLV True PC9_epitope_Rep1 912.56441792004 912.56332993586 47.196 2 -1.3577664114637906 0.3978253612475559 1.0 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000488712.5_1_2:216176805-216189903:+|nuORF', 'ENST00000427397.5_1_2:216176945-216197107:+|nuORF', 'ENST00000413174.1_3_2:216177270-216182893:+|nuORF'] 90839 22940 RETPKGGV True H1975_Epitope_Rep1 842.4610154806597 842.45990993586 95.389 2 -1.357796937151076 0.3978253612475559 1.0 ['ENSG00000159307|ENST00000360835|SCUBE1', 'SCUBE1|p.D188Y|1|0.27|ENSG00000159307|chr22:43262768-43262768|C/A|missense_variant'] 10417 12232 CHDGDETI True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 53.701 2 -1.3578071484083782 0.3978253612475559 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 63462 6865 LLWEAESSW True H1975_Epitope_Rep1 1119.52367530687 1119.52256993586 31.45 2 -1.3578359999796303 0.3978253612475559 1.0 ['ENSG00000156574|ENST00000287139|NODAL'] 64640 13725 LPTNTPKSI True NCI_RA007_Epitope_Rep3 969.54949613189 969.54838993586 61.308 2 -1.3578978387148173 0.39788022938350204 1.0 ['ENST00000535111.5_2_11:71779146-71779221:-|nuORF'] 124379 10097 VGVAGGAA True NCI_RA007_Epitope_Rep5 600.32312502552 600.3225749679301 45.473 1 -1.3579395490449495 0.39788035573782216 1.0 ['HTR3A|p.D199Rfs*29|1|0.3|ENSG00000166736|chr11:113986062-113986063|-/C|frameshift_variant'] 116733 10304 TVDLNRVLN True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 47.321 2 -1.3579534439659826 0.39788035573782216 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323', 'KRT31|p.A216S|1|0.37|ENSG00000094796|chr17:41395566-41395566|C/A|missense_variant'] 139913 6529 YPYHFQKHFFF True H1975_Epitope_Rep1 1559.7350054857895 1559.73334490379 30.171 3 -1.357963366774813 0.39788035573782216 1.0 ['ENSG00000149516|ENST00000278865|MS4A3'] 26770 23367 FKKKAHKL True PC9_epitope_Rep6 998.6389202729798 998.6378299358599 102.99 2 -1.3579870090675676 0.39788035573782216 1.0 ['ENSG00000117501|ENST00000367759|MROH9'] 126104 12640 VLEQITSFALG True H1975_Epitope_Rep3 1176.63903941228 1176.6379499358602 53.825 2 -1.3580911619126568 0.39788035573782216 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 133324 446 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 2.378 2 -1.358166816327866 0.3979329089478578 1.0 ['ENSG00000169340|ENST00000302451|PDILT'] 89172 3225 QVRTWDFPR True NCI_RA007_Epitope_Rep2 1203.6148903531098 1203.61324490379 17.2 3 -1.3581798667860323 0.3979329089478578 1.0 ['ENST00000311573.9_1_1:155649295-155658075:-|nuORF'] 561 9027 AAQKSLAG True PC9_epitope_Rep2 744.4130026590799 744.4124549679301 40.071 1 -1.3581832426426517 0.3979329089478578 1.0 ['QSOX2|p.H342Q|1|0.12|ENSG00000165661|chr9:136218739-136218739|G/C|missense_variant'] 68286 4696 LTEFLQDP True NCI_RA007_Epitope_Rep2 961.4756624852898 961.47456993586 22.892 2 -1.3582095363572984 0.3979329089478578 1.0 ['ENSG00000128242|ENST00000406361|GAL3ST1'] 107904 11779 SVVRVDSVP True PC9_epitope_Rep4 956.5290950404799 956.52798993586 53.074 2 -1.3582473930528773 0.39793777565860056 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.Q827Lfs*8|1|0.09|ENSG00000189079|chr12:45850603-45850619|AACCTGTGCAAACTTCA/-|frameshift_variant'] 23454 7090 EVTLCAYITI True NCI_RA007_Epitope_Rep2 1124.57874765484 1124.57764993586 32.201 2 -1.358265421775079 0.39793777565860056 1.0 ['A2M|p.S1102C|1|0.4|ENSG00000175899|chr12:9077392-9077392|G/C|missense_variant'] 104459 21991 SQLNTIVTVNH True PC9_epitope_Rep6 1224.64625005104 1224.64459490379 97.509 3 -1.3582744437196494 0.39793777565860056 1.0 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3'] 39963 11707 HPLLDPAVP True PC9_epitope_Rep5 957.52836676449 957.52726993586 50.029 2 -1.358320750198493 0.39793777565860056 1.0 ['nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C'] 41582 7111 IAAENNAP True NCI_RA007_Epitope_Rep2 798.3871818340599 798.38663496793 32.28 1 -1.3583727399753258 0.39795930530556783 1.0 ['ENST00000427230.2_1_7:29252086-29252344:+|nuORF'] 74301 16359 NELDRYHRIIE True PC9_epitope_Rep5 1456.7422756941999 1456.7411699358602 67.922 2 -1.358388869109197 0.39795930530556783 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 56602 9401 LDHPRIIK True PC9_epitope_Rep2 990.5974493838199 990.59634993586 41.5 2 -1.3584270666094171 0.39795930530556783 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 113377 22511 TLRWRKRWRWR True PC9_epitope_Rep5 1698.9807641108196 1698.97966993586 91.592 2 -1.3585167133240743 0.397961737886644 1.0 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 27141 18585 FLKIWDRW True NCI_RA007_Epitope_Rep4 1162.6287495120998 1162.62709490379 80.395 3 -1.3585666352945878 0.397961737886644 1.0 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF'] 42210 8546 IDRWIKEIDER True H1975_Epitope_Rep1 1471.7783268497499 1471.77722993586 37.798 2 -1.3585985460341596 0.3979808334127968 1.0 ['nc|ENSG00000197562|Q96S21-2|RAB40C'] 81932 21741 PLSRKHGG True PC9_epitope_Rep1 850.4773342511398 850.47622993586 88.46 2 -1.358647613276177 0.3979880091064043 1.0 ['ENSG00000142168|ENST00000270142|SOD1'] 102164 12113 SLRRVPRR True NCI_RA007_Epitope_Rep4 1038.6522789213398 1038.6511899358602 53.59 2 -1.3587387065306544 0.39801902309947795 1.0 ['nc|ENSG00000229214|Q5T6M2|LINC00242'] 37390 6041 GVSRNEDL True PC9_epitope_Rep2 888.4301092751999 888.42900993586 28.629 2 -1.3587561746496202 0.3980261981668435 1.0 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF'] 22690 3643 ETQTQRRGWPL True NCI_RA007_Epitope_Rep2 1370.7054962626598 1370.70385490379 18.82 3 -1.358799082549499 0.39804297820101786 1.0 ['ENST00000477976.5_1_1:880048-880436:-|nuORF'] 117243 15310 TVLRLIQDP True PC9_epitope_Rep4 1053.61824439805 1053.6171499358602 66.823 2 -1.3588276223795133 0.39804297820101786 1.0 ['CON__Q0V8M9'] 79986 23024 PEVWILSPL True PC9_epitope_Rep1 1052.5906326678798 1052.5895299358601 93.36 2 -1.3588482096751797 0.39804297820101786 1.0 ['ENST00000519579.1_X:52238938-52240854:+|nuORF'] 104561 23500 SQPRRTKSFLN True PC9_epitope_Rep5 1332.7262317072398 1332.72457490379 95.374 3 -1.358857415884798 0.39804297820101786 1.0 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 108867 16201 TAAFNKDALLN True PC9_epitope_Rep5 1176.6138872935999 1176.61278993586 67.308 2 -1.3590281495677823 0.39807653346998606 1.0 ['ENSG00000171608|ENST00000377346|PIK3CD'] 101308 20337 SLILCIRSV True PC9_epitope_Rep1 1002.58958712206 1002.58848993586 83.057 2 -1.359062482404143 0.39807653346998606 1.0 ['ENSG00000055732|ENST00000370589|MCOLN3', 'nc|ENSG00000055732|Q8TDD5-2|MCOLN3', 'ENST00000475312.1_1_1:85491576-85494918:-|nuORF'] 91017 10374 RFFFFFFFFWQ True H1975_Epitope_Rep1 1664.7968774663595 1664.79578993586 44.852 2 -1.3590954523308776 0.39807653346998606 1.0 ['ENST00000335154.9_1_12:50038759-50038969:-|nuORF'] 7743 316 ASQDCCCCCYS True H1975_Epitope_Rep2 1184.30650826216 1184.30540993586 1.7289 2 -1.3591074681654092 0.39807653346998606 1.0 ['ENST00000373053.7_2_10:74647032-74647206:+|nuORF'] 22844 8666 EVAPEPRPGP True NCI_RA007_Epitope_Rep1 1047.5349086969097 1047.53380993586 37.711 2 -1.359123692409479 0.39807653346998606 1.0 ['ENST00000522060.1_1_8:144090549-144099792:-|nuORF', 'ENST00000518831.1_1_8:144098425-144099792:-|nuORF', 'ENST00000517833.1_1_8:144063675-144099792:-|nuORF'] 18159 18820 EIKKAYYQL True H1975_Epitope_Rep3 1154.63356010902 1154.6324699358602 78.935 2 -1.3591465582817224 0.39807653346998606 1.0 ['ENST00000573120.5_1_16:4476059-4487492:+|nuORF', 'nc|ENSG00000103423|Q96EY1-2|DNAJA3', 'ENSG00000103423|ENST00000262375|DNAJA3'] 85355 6642 QETNLRVEGPQ True H1975_Epitope_Rep3 1269.6313282628898 1269.6302299358601 30.503 2 -1.3591794735517906 0.39807653346998606 1.0 ['nc|ENSG00000005379|O95153-2|TSPOAP1'] 13668 6255 DPRDAEDAI True PC9_epitope_Rep6 1000.4461532621599 1000.44504993586 32.556 2 -1.3591940671789071 0.39807653346998606 1.0 ['ENSG00000111786|ENST00000229390|SRSF9'] 831 8500 ACSCVHGR True H1975_Epitope_Rep3 831.34797695771 831.34686993586 37.68 2 -1.3592411761124157 0.39809330870523746 1.0 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.L1765Ffs*29|1|0.47|ENSG00000136011|chr12:103733013-103733014|-/T|frameshift_variant', 'STAB2|p.E1519Rfs*42|1|0.29|ENSG00000136011|chr12:103715831-103715831|G/-|frameshift_variant'] 106706 5378 STVADRGAL True PC9_epitope_Rep4 888.4664947839199 888.46538993586 27.413 2 -1.3592447743234126 0.39809330870523746 1.0 ['ENSG00000099954|ENST00000262608|CECR2', 'nc|ENSG00000099954|Q9BXF3|CECR2'] 47334 13973 IVFKHFKRNK True H1975_Epitope_Rep1 1315.7877097649896 1315.78660993586 58.905 2 -1.3592729925113638 0.39809330870523746 1.0 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 95459 18551 RWLEKEERFLK True PC9_epitope_Rep4 1532.8463468399198 1532.84470490379 79.431 3 -1.3592826614163034 0.39809330870523746 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 101746 12371 SLNLAEPVWKQ True PC9_epitope_Rep2 1283.68738658703 1283.68573490379 52.896 3 -1.3593239552496432 0.39810048143381477 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF', 'ENST00000568206.1_1_15:28360544-28362081:-|nuORF'] 16175 4916 EEEAAARK True PC9_epitope_Rep1 902.4457593393398 902.44466993586 23.772 2 -1.3593602054456806 0.39810765399144393 1.0 ['ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8'] 113410 11987 TLSEFLGTFI True H1975_Epitope_Rep2 1126.5910265906998 1126.58992993586 51.19 2 -1.3595263008780751 0.39816491897044803 1.0 ['ENSG00000103569|ENST00000219919|AQP9', 'AQP9|p.L252Ffs*16|1|0.21|ENSG00000103569|chr15:58183999-58184000|-/T|frameshift_variant', 'ENST00000559443.1_1_15:58430764-58438974:+|nuORF'] 126592 14345 VLLWKRTWWCH True NCI_RA007_Epitope_Rep2 1526.7968945497 1526.79578993586 60.464 2 -1.3596167373901804 0.39816491897044803 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 135744 9863 WLWWQPWWWWK True NCI_RA007_Epitope_Rep1 1786.85612367798 1786.8544649037901 42.367 3 -1.3596176329496852 0.39816491897044803 1.0 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 66624 11857 LSKEVTPRGGG True PC9_epitope_Rep5 1099.5985715826298 1099.59746993586 50.606 2 -1.359679428335582 0.3981771608983142 1.0 ['ENST00000491293.1_1_1:228289992-228290982:-|nuORF'] 60425 10156 LGVGLKTL True PC9_epitope_Rep2 799.5167394516301 799.51564993586 44.402 2 -1.3596954443070048 0.3981771608983142 1.0 ['ENST00000316509.10_2_17:8062906-8063221:-|nuORF'] 10463 18848 CILPEGKG True H1975_Epitope_Rep2 815.4211248146299 815.42002993586 78.255 2 -1.3597708107602289 0.3981771608983142 1.0 ['THSD7A|p.V979G|1|0.28|ENSG00000005108|chr7:11446189-11446189|A/C|missense_variant'] 27385 6962 FLVLASDG True H1975_Epitope_Rep3 820.43306939732 820.43196993586 31.741 2 -1.3598066448202848 0.3981771608983142 1.0 ['ENSG00000172840|ENST00000311765|PDP2', 'PDP2|p.L450Sfs*25|1|0.44|ENSG00000172840|chr16:66885628-66885628|G/-|frameshift_variant'] 22251 7585 ETAHWKPPP True H1975_Epitope_Rep2 1061.52942939365 1061.52832993586 34.128 2 -1.3598229113311988 0.3981771608983142 1.0 ['ENST00000478866.5_1_1:161172175-161179984:+|nuORF', 'NDUFS2|p.E315Sfs*27|1|0.31|ENSG00000158864|chr1:161210667-161210667|G/-|frameshift_variant', 'nc|ENSG00000158864|O75306-2|NDUFS2', 'ENSG00000158864|ENST00000676972|NDUFS2', 'ENST00000475570.1_1_1:161172175-161173338:+|nuORF'] 47508 12609 IVRDLDLKKP True H1975_Epitope_Rep1 1195.72885747619 1195.7277699358601 53.55 2 -1.3598270184974952 0.3981771608983142 1.0 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000485270.5_1_10:82033539-82034994:-|nuORF', 'ENSG00000151224|ENST00000372213|MAT1A'] 45169 21154 IPPMLIIF True PC9_epitope_Rep6 942.5612471159 942.56014993586 94.216 2 -1.3598305801742405 0.3981771608983142 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 37162 16139 GVQNVLKKHQA True NCI_RA007_Epitope_Rep3 1220.69895433024 1220.6978499358602 71.181 2 -1.3598698369518762 0.3981771608983142 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 15607 11030 EARRAFREEF True H1975_Epitope_Rep3 1309.6527324138099 1309.65162993586 47.517 2 -1.3599445958863685 0.3981771608983142 1.0 ['ENSG00000108479|ENST00000588479|GALK1', 'ENST00000589030.1_1_17:73759945-73761208:-|nuORF', 'ENST00000592494.1_1_17:73759392-73761232:-|nuORF'] 98719 15162 SGGGGFFSSL True PC9_epitope_Rep5 914.4133965819 914.41284496793 63.327 1 -1.359986428689193 0.3981771608983142 1.0 ['nc|ENSG00000008056|P17600-2|SYN1', 'ENSG00000008056|ENST00000295987|SYN1'] 52619 11245 KLLYSYYYVYR True H1975_Epitope_Rep1 1529.79185165557 1529.79074993586 48.23 2 -1.3600072782153714 0.3981771608983142 1.0 29957 24084 FWKLSLSLFL True PC9_epitope_Rep2 1252.7219811906 1252.72033490379 98.141 3 -1.3600133439584772 0.3981771608983142 1.0 ['ENSG00000180875|ENST00000318160|GREM2'] 20703 7567 EQEGPLEHV True NCI_RA007_Epitope_Rep2 1036.4825387708797 1036.48197496793 34.061 1 -1.3600256117914806 0.3981771608983142 1.0 ['ENST00000416600.6_1_20:3846990-3847266:+|nuORF'] 37161 16053 GVQNVLKKHQA True NCI_RA007_Epitope_Rep3 1220.69895433024 1220.6978499358602 70.832 2 -1.3600345213910934 0.3981771608983142 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 66187 8516 LSEREFDP True H1975_Epitope_Rep1 991.4610750503099 991.45996993586 37.686 2 -1.3600517163127048 0.3981771608983142 1.0 ['ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'ENST00000472910.5_1_7:105260689-105318420:-|nuORF'] 137918 5134 YFAFLFLFTYV True NCI_RA007_Epitope_Rep4 1429.7322115211298 1429.73056490379 26.266 3 -1.3601017251348855 0.39819624475791077 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5'] 123956 13274 VGRWAGDW True H1975_Epitope_Rep3 945.4456997696898 945.44460993586 56.315 2 -1.3601655125677028 0.39820341446561114 1.0 ['ENST00000485822.1_1_9:116343414-116343474:+|nuORF'] 41858 7252 IAYERGRIYFD True NCI_RA007_Epitope_Rep2 1401.7040992803297 1401.70246490379 32.828 3 -1.3602401767399366 0.3982344111129643 1.0 ['ENSG00000115827|ENST00000375255|DCAF17'] 8443 10924 ATPEKQVT True PC9_epitope_Rep2 872.46034677432 872.45924993586 47.341 2 -1.3603319637601563 0.39825349360845375 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'ENST00000468167.5_1_X:70644073-70748398:+|nuORF', 'ENST00000482544.5_1_X:70678126-70686220:+|nuORF'] 68920 12523 LTPAAPREALV True NCI_RA007_Epitope_Rep2 1136.65535818276 1136.6542699358602 53.325 2 -1.3604050975041078 0.398260662377889 1.0 ['ENST00000493335.5_1_22:31492537-31494796:+|nuORF', 'ENST00000460658.5_1_22:31492537-31495228:+|nuORF'] 1636 9790 AEFRHLERLQQ True H1975_Epitope_Rep3 1425.7476954278097 1425.7465899358601 42.681 2 -1.3605280427270778 0.3982846932698035 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 45973 11187 ISERTPSAL True PC9_epitope_Rep4 972.52400966004 972.52290993586 50.809 2 -1.3605386801051047 0.3982846932698035 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 124296 19344 VGTNGGLK True PC9_epitope_Rep6 744.41300265908 744.4124549679301 87.056 1 -1.360590377445821 0.3982846932698035 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 2917 5419 AEYLEVYW True PC9_epitope_Rep5 1071.49131254943 1071.49020993586 25.856 2 -1.360595129701702 0.3982846932698035 1.0 ['ENST00000548860.5_1_12:49218876-49221679:+|nuORF', 'nc|ENSG00000167535|P54284-5|CACNB3', 'nc|ENSG00000167535|P54284-2|CACNB3', 'nc|ENSG00000167535|P54284-3|CACNB3', 'nc|ENSG00000167535|P54284-4|CACNB3', 'ENSG00000167535|ENST00000301050|CACNB3'] 20983 8211 EQQRRERSEKK True NCI_RA007_Epitope_Rep2 1472.7807864612394 1472.77968993586 36.576 2 -1.3607110357830157 0.3982846932698035 1.0 ['ENST00000451663.5_1_21:15313179-15342301:-|nuORF'] 83484 18388 PTPTGSTKKP True PC9_epitope_Rep3 1012.55530978832 1012.55420993586 75.937 2 -1.3607247695216556 0.3982846932698035 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'nc|ENSG00000038427|P13611-3|VCAN', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant', 'VCAN|p.I610Mfs*17|1|0.12|ENSG00000038427|chr5:83520132-83520147|TAATTATGCCTGATAA/-|frameshift_variant'] 82577 7674 PPVQYEPV True NCI_RA007_Epitope_Rep1 927.4701831820298 927.46908993586 33.842 2 -1.3607281450884456 0.3982846932698035 1.0 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.R190Efs*6|1|0.29|ENSG00000101310|chr20:18524633-18524633|C/-|frameshift_variant'] 135828 7559 WNRIFRWKCHD True NCI_RA007_Epitope_Rep2 1559.7568206428698 1559.75518490379 34.028 3 -1.360741169552047 0.3982846932698035 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 13092 12981 DLQGRFEL True PC9_epitope_Rep1 976.4977949121999 976.49668993586 54.803 2 -1.3607592971702465 0.3982846932698035 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 43147 14168 IFDRELHRQTG True NCI_RA007_Epitope_Rep5 1370.7054962626598 1370.70438993586 61.187 2 -1.360814426223663 0.3982846932698035 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 66774 5583 LSLQESGPLES True NCI_RA007_Epitope_Rep2 1158.5768330785397 1158.5757299358602 26.332 2 -1.3608622972083817 0.3983037724386845 1.0 ['ENST00000429283.2_1_2:233199223-233199517:+|nuORF'] 98874 17434 SGVHPPAP True H1975_Epitope_Rep2 760.3867879112399 760.38568993586 72.351 2 -1.3609913744357032 0.3983300179862542 1.0 ['ENSG00000104897|ENST00000221494|SF3A2'] 124309 13908 VGTPPKSP True PC9_epitope_Rep3 781.43340375049 781.43230993586 58.578 2 -1.361004149231616 0.3983300179862542 1.0 ['ENST00000555778.1_1_14:24910766-24911445:-|nuORF', 'ENST00000556548.5_1_14:24910766-24911042:-|nuORF'] 127775 7591 VPDGYQRSQTF True NCI_RA007_Epitope_Rep2 1296.60986454232 1296.6087699358602 34.15 2 -1.3610262687354215 0.3983371846487362 1.0 ['RGPD3|p.G858R|1|0.35|ENSG00000153165|chr2:106429679-106429679|C/T|missense_variant'] 81353 14711 PLCNLSDVPP True H1975_Epitope_Rep3 1053.51648175145 1053.5153899358602 61.958 2 -1.361128592175272 0.39834435114049194 1.0 ['ENST00000560489.2_1_15:49658263-49658881:-|nuORF'] 98763 25414 SGHLLSTA True NCI_RA007_Epitope_Rep2 784.4079172786401 784.40682993586 107.26 2 -1.3611355890436014 0.3983467727527187 1.0 ['ENST00000481284.5_1_20:33462930-33515014:+|nuORF', 'ENSG00000131069|ENST00000360596|ACSS2', 'nc|ENSG00000131069|Q9NR19-2|ACSS2'] 82120 10641 PNEADAAQGY True H1975_Epitope_Rep2 1034.43050319802 1034.4294099358601 45.954 2 -1.361139161358163 0.3983467727527187 1.0 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 91791 24831 RKHERRHI True NCI_RA007_Epitope_Rep5 1130.6533415504998 1130.65224993586 103.0 2 -1.3612068083912443 0.398353938874199 1.0 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 81751 14329 PLPGSRRE True PC9_epitope_Rep3 910.49846361854 910.49736993586 60.202 2 -1.3613951713704413 0.398373015400374 1.0 ['ENST00000344450.9_1_6:292292-292409:+|nuORF'] 91155 14534 RGAAGNKA True H1975_Epitope_Rep1 743.4038349577099 743.4032849679301 61.111 1 -1.3614810951383038 0.39841833210261784 1.0 ['RBM47|p.R389K|1|0.46|ENSG00000163694|chr4:40436605-40436605|C/T|missense_variant'] 92608 12885 RMTVGNFSVP True PC9_epitope_Rep1 1106.5542642424998 1106.55316993586 54.435 2 -1.3614960749308418 0.39841833210261784 1.0 ['ENSG00000159871|ENST00000377950|LYPD5', 'nc|ENSG00000159871|Q6UWN5-2|LYPD5', 'ENST00000595666.1_1_19:44301745-44302778:-|nuORF'] 21609 22913 ERRKLLMEHI True PC9_epitope_Rep3 1323.7445246236698 1323.74287490379 93.401 3 -1.3615167755988078 0.39841833210261784 1.0 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF'] 95067 17636 RTTKRLSV True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58650993586 74.62 2 -1.3616628103583217 0.3984231712836148 1.0 ['ENSG00000163632|ENST00000295896|C3orf49'] 102856 27079 SPAAATAAAA True PC9_epitope_Rep5 800.4028318981999 800.4022849679301 110.81 1 -1.3616759483091951 0.3984231712836148 1.0 ['ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENST00000566468.1_1_15:74883534-74883915:+|nuORF', 'nc|ENSG00000179361|Q8IVW6-3|ARID3B', 'ENSG00000179361|ENST00000346246|ARID3B', 'nc|ENSG00000179361|Q8IVW6|ARID3B'] 40888 17927 HSHNHCCGH True NCI_RA007_Epitope_Rep5 1030.3610012529 1030.35990993586 75.746 2 -1.3616898745976858 0.3984231712836148 1.0 ['ENST00000369893.9_1_10:104488214-104489532:+|nuORF'] 127893 14608 VPGKVVPL True PC9_epitope_Rep1 807.5218248320699 807.52072993586 61.013 2 -1.361692875912596 0.3984231712836148 1.0 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 97716 18841 SEIEILAVDLP True PC9_epitope_Rep5 1197.6492697428098 1197.64816993586 77.489 2 -1.3617254643758183 0.3984303357271309 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 70338 10299 LVSHFNFIL True PC9_epitope_Rep2 1088.60186605792 1088.6007699358602 44.944 2 -1.3617492698880393 0.3984494092987805 1.0 ['ENST00000502271.5_1_5:53182250-53182346:-|nuORF'] 125386 10327 VIRTDPSWL True PC9_epitope_Rep6 1085.58694426977 1085.58584993586 50.422 2 -1.3618207456359193 0.39849230073003133 1.0 ['ENST00000551178.5_2_17:3576816-3577080:-|nuORF'] 44437 6685 ILHSVYECIAK True H1975_Epitope_Rep1 1274.66929399474 1274.66818993586 30.764 2 -1.3619402656563726 0.3985232821245683 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF'] 132325 8316 VTYKNSIK True PC9_epitope_Rep1 951.5389314481899 951.53782993586 36.821 2 -1.362020782402848 0.39853062002119527 1.0 ['nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 84546 7493 QARPHEGARP True PC9_epitope_Rep1 1117.5740881702898 1117.57298993586 33.641 2 -1.3620408966969557 0.39853062002119527 1.0 ['nc|ENSG00000167549|Q6QEF8|CORO6'] 13036 24532 DLNRKLIPRE True PC9_epitope_Rep4 1252.7251690780797 1252.7240699358601 102.85 2 -1.3620611175355193 0.39853062002119527 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26', 'nc|ENSG00000107890|Q9UPS8-2|ANKRD26'] 34348 9966 GPEAGENQKQ True PC9_epitope_Rep1 1056.4836014000398 1056.4825099358602 43.198 2 -1.3621210381133764 0.39853062002119527 1.0 ['ENSG00000161921|ENST00000293778|CXCL16'] 71894 11068 MEPPGGAY True H1975_Epitope_Rep2 820.3425401407599 820.3419949679301 47.604 1 -1.362151657366323 0.39853062002119527 1.0 ['ENSG00000185105|ENST00000409745|MYADML2'] 42344 8016 IEANDLLQELP True H1975_Epitope_Rep1 1253.6503323719699 1253.6492299358601 35.777 2 -1.3621546475959005 0.39853062002119527 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'ENST00000509957.5_1_5:37142364-37158376:-|nuORF'] 88085 18548 QRRQQKIQG True NCI_RA007_Epitope_Rep4 1140.6475874637197 1140.64594490379 80.254 3 -1.3621556786864413 0.39853062002119527 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-4|USP16'] 82868 6346 PRTFEGIDP True NCI_RA007_Epitope_Rep1 1030.5083595958997 1030.5072699358602 28.71 2 -1.3621774863713965 0.39853062002119527 1.0 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 55806 19908 LAPAEVVVA True PC9_epitope_Rep4 867.5065686907499 867.50546993586 84.711 2 -1.3622188233400871 0.39853062002119527 1.0 ['nc|ENSG00000196588|Q969V6|MRTFA', 'ENSG00000196588|ENST00000355630|MRTFA'] 69983 12064 LVLQPQLL True PC9_epitope_Rep5 922.5851533646198 922.58404993586 51.399 2 -1.3622303843490875 0.39853062002119527 1.0 ['ENST00000562532.2_1_20:30584341-30584887:+|nuORF'] 125494 7499 VIYQNDEK True NCI_RA007_Epitope_Rep3 1007.4923751785899 1007.49126993586 36.62 2 -1.3622321986463175 0.39853062002119527 1.0 ['ENST00000486390.1_1_1:16767863-16768082:+|nuORF'] 127794 15436 VPEAGSTT True NCI_RA007_Epitope_Rep1 760.3602983798801 760.35974496793 64.124 1 -1.3622932695395717 0.39857350384606227 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164', 'ENSG00000110274|ENST00000278935|CEP164', 'ENST00000528706.5_1_11:117279912-117282881:+|nuORF', 'ENST00000533675.5_1_11:117265793-117282881:+|nuORF'] 53049 26762 KPNLEKTLG True PC9_epitope_Rep1 998.5760452329 998.57494993586 108.83 2 -1.3623682434827031 0.39859973328253 1.0 ['nc|ENSG00000145734|A6H8Y1-2|BDP1', 'ENST00000508917.6_1_5:70751704-70841064:+|nuORF', 'nc|ENSG00000145734|A6H8Y1-7|BDP1', 'nc|ENSG00000145734|A6H8Y1-6|BDP1', 'ENSG00000145734|ENST00000358731|BDP1', 'nc|ENSG00000145734|A6H8Y1-8|BDP1'] 101897 9220 SLPSLGKSL True NCI_RA007_Epitope_Rep4 900.52803241132 900.52692993586 42.314 2 -1.3623727151837706 0.39859973328253 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 46396 5834 ISSDYYIW True PC9_epitope_Rep5 1045.47566248529 1045.47456993586 27.432 2 -1.3624943546684332 0.39863328452206626 1.0 ['ENSG00000053770|ENST00000261558|AP5M1'] 118709 8723 TYTFSLEGSG True PC9_epitope_Rep4 1060.47130538084 1060.47020993586 41.051 2 -1.3625199182053995 0.39863328452206626 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2', 'RIN2|p.P358Tfs*9|1|0.44|ENSG00000132669|chr20:19974942-19974943|-/A|frameshift_variant'] 107807 15326 SVTRTPSV True PC9_epitope_Rep2 845.4606811274899 845.45958993586 64.232 2 -1.3625388146579078 0.39863328452206626 1.0 ['ENSG00000237651|ENST00000432605|C2orf74'] 81742 11696 PLPEAALQ True NCI_RA007_Epitope_Rep3 837.45961849833 837.4590749679301 53.122 1 -1.3625659274019293 0.39863328452206626 1.0 ['ENSG00000268350|ENST00000622447|FAM156A', 'ENSG00000179304|ENST00000416841|FAM156B'] 92436 21915 RLRLRKERVSD True PC9_epitope_Rep6 1426.84807817542 1426.84642490379 97.197 3 -1.362566197077536 0.39863328452206626 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 99633 10303 SIFNTWLWYK True H1975_Epitope_Rep1 1356.6866583110402 1356.68556993586 44.575 2 -1.3625671620387114 0.39863328452206626 1.0 ['nc|ENSG00000211814|P0DPF4|TRAV35'] 29248 18786 FTWKLLIE True PC9_epitope_Rep6 1048.59571804832 1048.5946299358602 84.902 2 -1.3625713774214436 0.39863328452206626 1.0 ['ENSG00000204010|ENST00000371809|IFIT1B'] 20137 21781 ENARLEYSLTG True PC9_epitope_Rep5 1251.6095301891498 1251.6084299358602 88.812 2 -1.3625918293643877 0.39863328452206626 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 83700 24633 PVFRITLPVLA True PC9_epitope_Rep1 1224.7594293284799 1224.7588749679298 99.626 1 -1.3626173997567834 0.39863328452206626 1.0 ['ENSG00000174951|ENST00000645652|FUT1'] 47328 11392 IVERQTAP True PC9_epitope_Rep5 912.5028802926399 912.50178993586 48.817 2 -1.362672243382939 0.39863328452206626 1.0 ['TBC1D9|p.K359Rfs*20|1|0.42|ENSG00000109436|chr4:140670910-140670910|T/-|frameshift_variant'] 44682 8684 ILTEIPEALNL True NCI_RA007_Epitope_Rep4 1224.6965542883997 1224.69490490379 40.19 3 -1.36270918678416 0.39863328452206626 1.0 ['RYR3|p.S569I|1|0.38|ENSG00000198838|chr15:33586034-33586034|G/T|missense_variant'] 132269 12415 VTVTVCRSF True PC9_epitope_Rep2 1010.52190148506 1010.52080993586 53.061 2 -1.3627263973558172 0.39863328452206626 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 61195 17340 LILIASYKVI True PC9_epitope_Rep3 1131.72673221787 1131.72508490379 71.871 3 -1.3628061615935514 0.39863328452206626 1.0 ['OR4C6|p.T217K|1|0.08|ENSG00000181903|chr11:55665816-55665816|C/A|missense_variant'] 6546 12631 APTPLRPGF True PC9_epitope_Rep5 954.5287011176599 954.52760993586 53.588 2 -1.3628449113323802 0.3986476029476541 1.0 ['ENSG00000177303|ENST00000321617|CASKIN2', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 58298 11497 LELWVNYYVRW True NCI_RA007_Epitope_Rep1 1539.7874349814701 1539.78632993586 48.686 2 -1.362852910591086 0.3986476029476541 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 29965 26083 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 107.96 3 -1.362910952130427 0.39865001607123723 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 21031 5795 EQSSWFWRWL True H1975_Epitope_Rep1 1423.6673198487897 1423.6662299358602 27.363 2 -1.3629220391887393 0.39865001607123723 1.0 ['ENST00000339526.8_1_1:182360314-182360662:-|nuORF'] 13465 7552 DNEVEDCLT True H1975_Epitope_Rep3 1036.4019054916798 1036.40080993586 34.03 2 -1.3629387910367252 0.39865717482917074 1.0 ['ENSG00000180644|ENST00000441259|PRF1'] 58709 15862 LERRPKVKH True PC9_epitope_Rep5 1161.70945944429 1161.70780490379 66.004 3 -1.3630022731219265 0.39867865008035236 1.0 ['nc|nan|Q8N4C9-2|C17orf78', 'ENSG00000278505|ENST00000615133|C17orf78'] 13008 11357 DLMQKLYLLFS True H1975_Epitope_Rep2 1369.7315598981297 1369.72990490379 48.733 3 -1.3630355495129471 0.39867865008035236 1.0 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5'] 11551 16415 DFSFYIYRLYW True NCI_RA007_Epitope_Rep2 1571.74490146315 1571.74380993586 68.579 2 -1.3630368589113784 0.39867865008035236 1.0 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 67313 12131 LSSCDRSEI True PC9_epitope_Rep5 1008.45460977088 1008.45350993586 51.652 2 -1.3633856684763872 0.3987263421021307 1.0 ['ENST00000025301.3_1_13:42875956-42875983:+|nuORF'] 13317 16142 DLTTRNYAR True H1975_Epitope_Rep2 1108.5625204270798 1108.5614299358601 67.302 2 -1.3634127802448002 0.3987263421021307 1.0 ['ENSG00000116497|ENST00000373475|S100PBP'] 132338 12058 VTYSPLFWK True PC9_epitope_Rep1 1139.6015317047497 1139.6004299358601 51.24 2 -1.3634149626083412 0.3987263421021307 1.0 ['ENST00000316881.8_1_17:54968766-54968946:-|nuORF'] 122906 17739 VGHQGSLFL True PC9_epitope_Rep6 956.5079656730799 956.50686993586 80.867 2 -1.3634851562264325 0.3987263421021307 1.0 ['ENST00000525065.1_1_11:117062460-117063438:+|nuORF'] 91118 23282 RFTCLYRVR True PC9_epitope_Rep6 1212.6549813432798 1212.65332490379 102.65 3 -1.3635035230233419 0.3987263421021307 1.0 ['ENSG00000061656|ENST00000374273|SPAG4'] 31173 6463 GAYIGGTQ True PC9_epitope_Rep2 765.36571811349 765.36462993586 30.273 2 -1.3635481025119736 0.3987454770519901 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 128147 13223 VPLPGRDPV True PC9_epitope_Rep1 948.5392658013599 948.53816993586 55.725 2 -1.3635890784043463 0.3987454770519901 1.0 ['chr12:121993709-121999716|266|30.82|0.37|6.38|+|2|TE_info:SVA_F,SVA_F_dup702,SVA,Retroposon,donor,+,121993006,121993709|None,CFAP251|6'] 125607 11468 VKKKLRKKGKK True PC9_epitope_Rep6 1339.9503584159895 1339.94926993586 55.178 2 -1.3636359681796884 0.3987454770519901 1.0 ['nc|ENSG00000166960|Q5BJE1-4|CCDC178', 'nc|ENSG00000166960|Q5BJE1-3|CCDC178', 'ENSG00000166960|ENST00000383096|CCDC178'] 130839 8195 VTAVEVGKHV True NCI_RA007_Epitope_Rep2 1037.5869442697697 1037.58584993586 36.512 2 -1.3636880622577403 0.3987454770519901 1.0 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 96612 8428 SAGYMEPY True PC9_epitope_Rep1 916.36366950816 916.36256993586 37.254 2 -1.3636900446425644 0.3987454770519901 1.0 ['ENSG00000107338|ENST00000377707|SHB', 'nc|ENSG00000107338|Q15464-2|SHB'] 11028 8724 DASDIDVWVP True H1975_Epitope_Rep1 1115.51350454599 1115.5124099358602 38.485 2 -1.3636938332396786 0.3987454770519901 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 9049 11420 AVHQKQSGL True PC9_epitope_Rep4 966.5246783663799 966.52358993586 51.696 2 -1.363837112316301 0.3987645357487175 1.0 ['ENST00000556905.2_1_15:22016140-22016464:-|nuORF'] 105903 21266 SSRDSLREPP True PC9_epitope_Rep1 1142.5679997303398 1142.5669099358602 86.625 2 -1.3640269228065331 0.3988193006260563 1.0 ['nc|ENSG00000124313|Q5JU85-3|IQSEC2', 'ENSG00000124313|ENST00000642864|IQSEC2'] 33711 12194 GLHPVPMGP True PC9_epitope_Rep2 903.46365833295 903.46256993586 52.217 2 -1.3640572095669827 0.3988217091168769 1.0 ['ENSG00000111961|ENST00000367467|SASH1', 'SASH1|p.S1008R|1|0.42|ENSG00000111961|chr6:148544492-148544492|A/C|missense_variant'] 5909 19348 APGMAEHRGK True PC9_epitope_Rep3 1052.5185474401198 1052.5174499358602 79.644 2 -1.3640834266929054 0.3988217091168769 1.0 ['OTOGL|p.K1789Rfs*16|1|0.85|ENSG00000165899|chr12:80353341-80353341|G/-|frameshift_variant', 'ENSG00000165899|ENST00000547103|OTOGL'] 80202 20846 PFYKQYPFLWP True PC9_epitope_Rep1 1484.7492585675998 1484.74816993586 85.01 2 -1.3642389567069244 0.398888373144809 1.0 ['nc|ENSG00000240891|Q0VAA5-2|PLCXD2', 'nc|ENSG00000240891|Q0VAA5|PLCXD2', 'ENSG00000240891|ENST00000636933|PLCXD2'] 130638 6187 VSTAARAY True PC9_epitope_Rep6 837.4344663796498 837.43336993586 32.252 2 -1.3642822577453917 0.3989028119905275 1.0 ['ENSG00000275489|ENST00000614158|C17orf98'] 66256 8483 LSFEESQRIK True NCI_RA007_Epitope_Rep2 1235.6510010783097 1235.64990993586 37.64 2 -1.3643515214851605 0.3989028119905275 1.0 ['ENSG00000041802|ENST00000265245|LSG1'] 79512 14468 PCGPGGGGR True H1975_Epitope_Rep3 756.33370679256 756.33315496793 61.01 1 -1.3643656327542582 0.3989028119905275 1.0 ['ENSG00000047188|ENST00000161863|YTHDC2', 'YTHDC2|p.D60Efs*9|1|0.27|ENSG00000047188|chr5:113514071-113514077|GGGACCA/-|frameshift_variant'] 37655 5028 GVWTAHCKE True PC9_epitope_Rep3 1029.4702002653698 1029.4691099358602 24.428 2 -1.3643961481581894 0.3989028119905275 1.0 ['ENSG00000044524|ENST00000336596|EPHA3'] 122371 15343 VGDKLLEV True H1975_Epitope_Rep1 871.5014833103099 871.50038993586 64.285 2 -1.364418926659996 0.3989028119905275 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 40031 8930 HPSSSLALLS True PC9_epitope_Rep5 1010.5396597241801 1010.53856993586 39.294 2 -1.3644227870259804 0.3989028119905275 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1', 'ENSG00000162419|ENST00000373816|GMEB1'] 87015 22475 QMLQISNLYL True PC9_epitope_Rep6 1221.64274489373 1221.64108490379 99.445 3 -1.3644392520464916 0.3989028119905275 1.0 ['ENSG00000182771|ENST00000327946|GRID1'] 7281 1327 ARDRDWRRCG True NCI_RA007_Epitope_Rep2 1289.6159700656099 1289.6143349037902 7.2184 3 -1.3644511187776531 0.3989028119905275 1.0 ['L1MD2_dup3350|chr5:176309943-176310863:+|1.3301102545016334|0.265229905058228|2.33|541.0|35|3|sense'] 25944 23662 FFVFLLFL True PC9_epitope_Rep2 1044.60482618004 1044.6037299358602 96.488 2 -1.364458234008226 0.3989028119905275 1.0 ['ENST00000335648.3_1_1:23697575-23698100:+|nuORF'] 56096 17603 LATRTQKK True PC9_epitope_Rep4 944.5767139392399 944.57560993586 75.726 2 -1.3644586895946234 0.3989028119905275 1.0 ['nc|ENSG00000170802|P32314-2|FOXN2'] 89078 5019 QVNEKSLIRQY True NCI_RA007_Epitope_Rep5 1376.74121306504 1376.7401099358601 26.008 2 -1.3644616744318054 0.3989028119905275 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 97715 18744 SEIEILAVDLP True PC9_epitope_Rep5 1197.6492697428098 1197.64816993586 77.111 2 -1.3644677886636136 0.3989028119905275 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 79292 16736 PAPVAPRGLL True PC9_epitope_Rep1 989.6022004110899 989.60110993586 69.202 2 -1.364485473271071 0.39892186495942117 1.0 ['ENST00000521682.5_1_8:144356964-144357361:+|nuORF'] 108 18076 AAASKKKP True PC9_epitope_Rep4 799.49158733295 799.49048993586 77.591 2 -1.3645492965127586 0.39893617021276595 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 37566 17419 GVVPGVLEPA True PC9_epitope_Rep5 936.5280324113198 936.52692993586 72.003 2 -1.3645537205351739 0.39893617021276595 1.0 ['ENST00000538906.5_2_16:31084355-31084742:-|nuORF'] 47329 21794 IVESLGKPECE True PC9_epitope_Rep1 1202.5852895872597 1202.5841899358602 88.651 2 -1.364588866307919 0.3989385754063638 1.0 ['UBA6|p.E1018Kfs*26|1|0.07|ENSG00000033178|chr4:67619104-67619104|C/-|frameshift_variant', 'ENSG00000033178|ENST00000322244|UBA6', 'UBA6|p.Y611Tfs*17|1|0.45|ENSG00000033178|chr4:67635464-67635464|A/-|frameshift_variant'] 44375 19156 ILERQYAAL True PC9_epitope_Rep5 1075.6025943339098 1075.6014899358602 78.72 2 -1.3645937609900736 0.3989385754063638 1.0 ['PCLO|p.G3339R|1|0.3|ENSG00000186472|chr7:82950573-82950573|C/G|missense_variant'] 133030 25075 VVPIEVLPTV True NCI_RA007_Epitope_Rep1 1064.648147544 1064.64757496793 103.77 1 -1.3646377008419348 0.39896477867682056 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 142083 18302 YVLYASAM True PC9_epitope_Rep6 916.4364405255999 916.43589496793 83.042 1 -1.364657841614129 0.39896477867682056 1.0 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-9|SMPD4', 'nc|ENSG00000136699|Q9NXE4-10|SMPD4', 'nc|ENSG00000136699|Q9NXE4-7|SMPD4', 'nc|ENSG00000136699|Q9NXE4-8|SMPD4', 'ENST00000438378.2_1_2:132275414-132277996:+|nuORF', 'ENST00000482171.5_1_2:130910130-130912221:-|nuORF', 'nc|ENSG00000136699|Q9NXE4-5|SMPD4'] 102407 16146 SLTLKDRMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 66.919 2 -1.3647611957605674 0.3989957282754846 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 45328 23344 IQAQSKKTK True PC9_epitope_Rep3 1030.61349337078 1030.6123899358602 95.072 2 -1.3648776525641821 0.39900287951262464 1.0 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 4077 10700 AHLSQETSHWR True NCI_RA007_Epitope_Rep1 1350.6428960061 1350.64178993586 45.611 2 -1.3649323234204582 0.3990100305795843 1.0 ['ENST00000519798.1_1_8:75897034-75924708:+|nuORF'] 115624 24035 TRVIKLAH True PC9_epitope_Rep5 936.5868847001198 936.58578993586 97.433 2 -1.3650226487380899 0.39903623059075494 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'nc|ENSG00000112282|Q9ULK4-2|MED23', 'MED23|p.H779Pfs*26|1|0.22|ENSG00000112282|chr6:131598646-131598647|-/G|frameshift_variant'] 56922 8032 LDQGLILK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 37.586 2 -1.3650897223383467 0.39903623059075494 1.0 ['nc|ENSG00000228741|Q96N96-3|SPATA13'] 131987 11248 VTSKGGAPPP True PC9_epitope_Rep4 909.4919812557698 909.49088993586 51.039 2 -1.3650996243488922 0.3990386331457399 1.0 ['nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 92579 6104 RMPWPRQQGW True NCI_RA007_Epitope_Rep1 1340.6560439724399 1340.65494993586 27.781 2 -1.365109284445647 0.3990386331457399 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 30509 9433 GAGGRRTR True PC9_epitope_Rep5 829.4630811693299 829.46198993586 41.239 2 -1.365199425860024 0.3990648312294019 1.0 ['ENST00000316939.2_1_19:13065244-13067802:-|nuORF'] 142423 16457 YYFCRWYRNRK True NCI_RA007_Epitope_Rep2 1653.7986854548496 1653.79758993586 68.742 2 -1.3652198531599467 0.3990648312294019 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 82387 22343 PPLMIPIF True PC9_epitope_Rep6 926.52994698762 926.52884993586 98.913 2 -1.3653215636940235 0.3990959376672813 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6', 'SOX6|p.I335Nfs*2|1|0.13|ENSG00000110693|chr11:16096093-16096094|-/T|frameshift_variant'] 140471 23649 YRIGKVTS True PC9_epitope_Rep5 922.52361573722 922.52250993586 95.945 2 -1.3654216707946027 0.3990959376672813 1.0 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'UQCRC2|p.L444Ffs*8|1|0.28|ENSG00000140740|chr16:21983137-21983138|-/T|frameshift_variant', 'ENSG00000140740|ENST00000268379|UQCRC2'] 39787 21703 HMDNRQSLLSF True PC9_epitope_Rep4 1346.6401191247799 1346.6390299358602 91.683 2 -1.3654245235501465 0.3990959376672813 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 60374 20515 LGTEASKVCSS True NCI_RA007_Epitope_Rep5 1080.5121246469998 1080.51102993586 85.853 2 -1.365446198098223 0.3990959376672813 1.0 ['nc|ENSG00000144724|P23470-2|PTPRG', 'ENSG00000144724|ENST00000474889|PTPRG'] 18880 11747 ELDTPDEA True PC9_epitope_Rep3 888.3712569863999 888.37014993586 50.202 2 -1.36545518168296 0.3990959376672813 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'ENST00000480674.1_1_9:79267369-79318326:-|nuORF', 'ENST00000488346.5_1_9:79259601-79307072:-|nuORF', 'ENST00000466266.6_1_9:79228267-79307072:-|nuORF', 'nc|ENSG00000106772|Q8WUY3-5|PRUNE2'] 129879 13938 VRRVRAKRPP True NCI_RA007_Epitope_Rep4 1233.7894411004897 1233.78778490379 60.89 3 -1.3654991545670219 0.3990959376672813 1.0 ['ENST00000558457.5_1_15:41576231-41578244:+|nuORF', 'ENST00000560545.1_1_15:41576231-41577603:+|nuORF'] 12204 19807 DIGFGKLET True PC9_epitope_Rep1 978.5022115863 978.50110993586 81.003 2 -1.3655741151293406 0.3990959376672813 1.0 ['ENST00000476153.6_1_1:205492708-205496295:+|nuORF', 'ENST00000505932.5_1_1:205492708-205498898:+|nuORF', 'ENST00000504648.5_1_1:205492597-205500503:+|nuORF', 'ENSG00000117266|ENST00000429964|CDK18', 'nc|ENSG00000117266|Q07002-3|CDK18'] 3671 12096 AGQCQPLHPP True PC9_epitope_Rep1 1046.4967493663798 1046.49564993586 51.387 2 -1.365597576945681 0.3990959376672813 1.0 ['ENST00000572218.5_2_17:44109587-44110490:-|nuORF'] 79567 11796 PDFKYNFENAS True H1975_Epitope_Rep2 1330.5829810881398 1330.58188993586 50.447 2 -1.365629851905439 0.3990959376672813 1.0 ['ENST00000491086.5_1_3:149531035-149619859:+|nuORF'] 123303 18737 VGLNVFLEKNK True H1975_Epitope_Rep3 1259.7237720957498 1259.72266993586 78.576 2 -1.365629917416154 0.3990959376672813 1.0 ['ENST00000512790.5_1_5:112197073-112227301:+|nuORF', 'nc|ENSG00000153037|P09132-2|SRP19', 'ENSG00000153037|ENST00000505459|SRP19'] 35328 17580 GRRLHRPL True NCI_RA007_Epitope_Rep5 1003.6151651366299 1003.61406993586 74.405 2 -1.3656439777290907 0.3990959376672813 1.0 ['ENST00000236671.6_2_11:1774778-1774826:-|nuORF'] 118555 13930 TYQRHYRNVFH True H1975_Epitope_Rep1 1519.74327875371 1519.74218993586 58.736 2 -1.3656522906284188 0.3990959376672813 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 111792 5783 TILATTAA True NCI_RA007_Epitope_Rep1 760.43306939732 760.43196993586 26.548 2 -1.365672023261282 0.3990959376672813 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 42440 12984 IEDVAHRML True PC9_epitope_Rep1 1082.5542642425 1082.55316993586 54.814 2 -1.365702028981562 0.3990959376672813 1.0 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF', 'ENST00000556124.3_1_14:20916255-20917133:-|nuORF'] 10466 18674 CILPEGKG True H1975_Epitope_Rep3 815.4211248146299 815.4205749679301 78.302 1 -1.3657076693119448 0.3990959376672813 1.0 ['THSD7A|p.V979G|1|0.28|ENSG00000005108|chr7:11446189-11446189|A/C|missense_variant'] 11476 18949 DFFLKHPDK True PC9_epitope_Rep3 1145.5869442697697 1145.58529490379 78.112 3 -1.3657258214366643 0.3990959376672813 1.0 ['nc|ENSG00000083642|Q9NTI5-2|PDS5B', 'ENSG00000083642|ENST00000315596|PDS5B', 'nc|ENSG00000083642|Q9NTI5-3|PDS5B', 'ENST00000498550.5_1_13:33222909-33262824:+|nuORF', 'PDS5B|p.A95Lfs*9|1|0.49|ENSG00000083642|chr13:32651978-32651978|G/-|frameshift_variant', 'nc|ENSG00000083642|Q9NTI5-4|PDS5B', 'ENST00000493653.1_1_13:33222909-33226198:+|nuORF'] 24201 7727 EYRLPLFFDP True H1975_Epitope_Rep1 1295.6550238295897 1295.65392993586 34.683 2 -1.3657514900774268 0.3991007386789423 1.0 ['ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 18796 8164 ELDFLNEGRN True H1975_Epitope_Rep1 1205.56766537717 1205.5665699358601 36.344 2 -1.3658055766763457 0.3991007386789423 1.0 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 49556 16412 KFLLLLCP True H1975_Epitope_Rep2 945.57214615277 945.57104993586 68.35 2 -1.3658232097222216 0.3991007386789423 1.0 ['ENST00000333751.4_1_17:7256103-7256196:+|nuORF'] 81139 19367 PKGKAPLRARS True H1975_Epitope_Rep1 1179.72002412799 1179.7189299358602 80.678 2 -1.3658342865965087 0.3991007386789423 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 56584 16526 LDHFLNFQL True PC9_epitope_Rep2 1145.58694426977 1145.58529490379 68.807 3 -1.3658528639873684 0.3991031390134529 1.0 ['ENST00000372733.3_1_20:43955620-43955659:-|nuORF'] 6482 15903 APSNTFVAP True PC9_epitope_Rep5 902.4497820906199 902.44923496793 66.161 1 -1.3659040938519693 0.3991031390134529 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 43335 7376 IFYQKARYQRK True NCI_RA007_Epitope_Rep4 1499.83611650939 1499.8350099358602 35.013 2 -1.3659444935559069 0.3991221809877248 1.0 ['nc|ENSG00000180745|Q8NCR9-2|CLRN3', 'ENSG00000180745|ENST00000368671|CLRN3'] 110858 26369 TGRGGPPP True H1975_Epitope_Rep2 737.3820368839699 737.3814849679301 108.5 1 -1.366194582221147 0.3991888002093419 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 62185 10974 LLEPFRHYY True PC9_epitope_Rep2 1236.62914343492 1236.6274949037902 47.535 3 -1.3662099317094687 0.39919594642814665 1.0 ['PDCD7|p.Q429H|1|0.26|ENSG00000090470|chr15:65119423-65119423|C/A|missense_variant'] 70744 17320 LWVSEWGHWNR True PC9_epitope_Rep2 1468.7000169593998 1468.69890993586 71.88 2 -1.3663055683658094 0.39921023835577335 1.0 ['ENST00000394893.5_1_7:75615553-75615796:+|nuORF'] 97964 11826 SENQLQTVNF True PC9_epitope_Rep1 1178.5567663402999 1178.5551149037901 50.354 3 -1.3663346571086954 0.39921023835577335 1.0 ['ENST00000569461.1_1_16:81045544-81053727:+|nuORF', 'nc|ENSG00000166451|Q96H22-2|CENPN', 'nc|ENSG00000166451|Q96H22-5|CENPN', 'nc|ENSG00000166451|Q96H22-4|CENPN', 'ENSG00000166451|ENST00000305850|CENPN', 'nc|ENSG00000166451|Q96H22-3|CENPN'] 114313 16959 TPQRSVPEV True PC9_epitope_Rep2 1011.5349086969098 1011.53380993586 70.479 2 -1.366375808419292 0.399217477136775 1.0 ['ENSG00000175662|ENST00000379504|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-2|TOM1L2', 'ENST00000537091.2_1_17:17772601-17875627:-|nuORF'] 81128 24084 PKGERRPLTAK True PC9_epitope_Rep2 1251.7411534953897 1251.73951490379 98.141 3 -1.3663910567006718 0.399217477136775 1.0 ['ENSG00000198920|ENST00000361413|KIAA0753', 'nc|ENSG00000198920|Q2KHM9-2|KIAA0753'] 56484 13074 LDESEEREL True PC9_epitope_Rep1 1118.5091474415399 1118.50804993586 55.157 2 -1.3664234813994138 0.399217477136775 1.0 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2'] 82386 23556 PPLMIPIF True PC9_epitope_Rep4 926.52994698762 926.52884993586 98.915 2 -1.3664518310262677 0.399217477136775 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6', 'SOX6|p.I335Nfs*2|1|0.13|ENSG00000110693|chr11:16096093-16096094|-/T|frameshift_variant'] 15485 5549 EALRVQGEL True PC9_epitope_Rep3 1013.55055876105 1013.54946993586 26.423 2 -1.3664715023638525 0.399217477136775 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 84231 9616 PYLSKLGFEIV True NCI_RA007_Epitope_Rep4 1264.70672504928 1264.70562993586 43.838 2 -1.36653770006518 0.399217477136775 1.0 ['ENSG00000136381|ENST00000258886|IREB2', 'ENST00000559676.1_1_15:78777183-78780743:+|nuORF'] 126264 19412 VLHKRWSI True PC9_epitope_Rep4 1037.61343380113 1037.61232993586 82.779 2 -1.3665386915533484 0.399217477136775 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 135977 5262 WQLLALCAP True NCI_RA007_Epitope_Rep4 1013.5368232732098 1013.53572993586 26.786 2 -1.3665704911427632 0.399217477136775 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1'] 112340 7521 TLAEAQPP True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 33.88 1 -1.3665750891602109 0.399217477136775 1.0 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 100864 7540 SLEREYSCTVR True NCI_RA007_Epitope_Rep2 1341.63469939117 1341.63360993586 33.955 2 -1.366597345331207 0.399217477136775 1.0 ['nc|ENSG00000171877|Q7Z6J6-2|FRMD5', 'ENSG00000171877|ENST00000417257|FRMD5'] 41007 4832 HTGEKPYHCTK True H1975_Epitope_Rep3 1299.6030053400698 1299.60190993586 23.712 2 -1.3666718145213537 0.399217477136775 1.0 ['ENSG00000136870|ENST00000339664|ZNF189', 'nc|ENSG00000136870|O75820-3|ZNF189', 'nc|ENSG00000136870|O75820-4|ZNF189', 'nc|ENSG00000136870|O75820-2|ZNF189'] 139762 8894 YPEPRTQWRNE True H1975_Epitope_Rep3 1474.69532550178 1474.6942299358602 39.208 2 -1.3668385852357077 0.3992959756445628 1.0 ['ENST00000416543.5_1_4:106629178-106629382:-|nuORF'] 12805 8356 DLFLCPFL True PC9_epitope_Rep3 966.48847609846 966.48736993586 37.109 2 -1.3669059655004374 0.3993269036378123 1.0 ['nc|ENSG00000139263|Q6UXM1-2|LRIG3', 'ENSG00000139263|ENST00000320743|LRIG3', 'ENST00000552646.1_1_12:59268119-59271275:-|nuORF', 'ENST00000433272.6_1_12:59266356-59274151:-|nuORF'] 82279 20193 PPGPGGGG True H1975_Epitope_Rep3 594.2761748331 594.2756249679301 84.462 1 -1.3669798360117176 0.39932929802238054 1.0 ['POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000176160|ENST00000323777|HSF5'] 141532 11267 YTLRTDGLVF True PC9_epitope_Rep6 1183.62372370131 1183.62208490379 54.35 3 -1.3669840545720455 0.39932929802238054 1.0 ['ARL4D|p.R92L|1|0.34|ENSG00000175906|chr17:43400007-43400007|G/T|missense_variant'] 115938 6376 TSGQTRVI True PC9_epitope_Rep4 860.4715801643599 860.47048993586 31.611 2 -1.367050040286861 0.39934358388926544 1.0 ['ENST00000339924.12_2_19:55344219-55358662:+|nuORF'] 59508 19965 LFRNGLQLI True PC9_epitope_Rep5 1072.6393141958 1072.63820993586 81.848 2 -1.36705073802287 0.39934358388926544 1.0 ['nc|ENSG00000010030|Q9Y603-6|ETV7', 'nc|ENSG00000010030|Q9Y603-5|ETV7'] 12589 13685 DKYRDQYNWFF True PC9_epitope_Rep3 1580.7048275563195 1580.70372993586 57.712 2 -1.3671255457015847 0.3993626180226889 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 19745 17210 ELRVFHIHNES True NCI_RA007_Epitope_Rep1 1379.6945972257897 1379.6935099358602 71.075 2 -1.3671743059465862 0.3993935430168262 1.0 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 74837 24397 NHFLIWVLNW True PC9_epitope_Rep4 1340.7029770815197 1340.7018899358602 102.32 2 -1.3671930164722916 0.3994006849315068 1.0 ['ENST00000256646.6_1_1:120455306-120455408:-|nuORF'] 11642 9900 DGLSKMDTE True H1975_Epitope_Rep3 994.4277263167 994.42662993586 43.112 2 -1.3673287272786565 0.3994197177069337 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 5125 17585 ALLMLPSNSHA True PC9_epitope_Rep5 1152.5961290544801 1152.59449490379 72.649 3 -1.3673456124889616 0.39941975220565507 1.0 ['ENST00000546093.5_1_16:86585831-86588279:-|nuORF'] 42872 5075 IEQSNSYWRET True NCI_RA007_Epitope_Rep1 1411.6368075661499 1411.6351649037902 23.825 3 -1.367354426854433 0.39941975220565507 1.0 ['ENSG00000118620|ENST00000261560|ZNF430'] 97002 3755 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 19.528 2 -1.3674224574895995 0.39941975220565507 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 122803 12165 VGGQPHPP True PC9_epitope_Rep1 787.3976869481099 787.39658993586 51.656 2 -1.3674550952816324 0.39941975220565507 1.0 ['ENST00000478619.1_1_3:50374443-50374560:-|nuORF'] 97187 7277 SDVVRLEK True NCI_RA007_Epitope_Rep4 944.5290950404799 944.52798993586 34.626 2 -1.3675507558242166 0.39941975220565507 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 137036 22970 YALQRLRR True PC9_epitope_Rep1 1074.6410455312998 1074.64047496793 93.154 1 -1.3675637717037599 0.399426893214273 1.0 ['ENST00000196371.9_1_5:41731180-41731306:-|nuORF'] 128518 10019 VPSSKEELDKE True H1975_Epitope_Rep3 1259.6245115469499 1259.62340993586 43.576 2 -1.3676064385932574 0.39942696134961303 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD'] 112600 10181 TLERSQLLP True H1975_Epitope_Rep3 1055.5975089534697 1055.59640993586 44.207 2 -1.367670150789805 0.39942696134961303 1.0 ['ENST00000521259.1_1_8:87516185-87516770:+|nuORF'] 115742 11383 TSCARHGP True PC9_epitope_Rep5 827.37082057727 827.36972993586 48.783 2 -1.3677182118911388 0.39942696134961303 1.0 ['ENST00000538721.6_2_17:79867404-79869149:-|nuORF'] 80532 15295 PGPISPQIFLL True PC9_epitope_Rep5 1180.68559568188 1180.68394490379 63.842 3 -1.3677493782705354 0.39942696134961303 1.0 ['ENST00000316077.13_1_X:135300553-135300625:-|nuORF'] 79858 20663 PEKDPEQP True NCI_RA007_Epitope_Rep3 938.4345259493 938.43342993586 90.005 2 -1.367757568713419 0.39942696134961303 1.0 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19', 'ENST00000527451.1_1_11:130773148-130776010:-|nuORF'] 99606 20375 SIFEQWLRRHR True PC9_epitope_Rep4 1526.82186342758 1526.8207699358602 86.518 2 -1.3677769385410627 0.39942696134961303 1.0 ['ENSG00000077498|ENST00000263321|TYR'] 69353 6048 LTVPVKAPS True NCI_RA007_Epitope_Rep5 910.5487678559 910.54766993586 29.945 2 -1.3677777688848698 0.39942696134961303 1.0 ['nc|ENSG00000156990|Q6P087-6|RPUSD3', 'nc|ENSG00000156990|Q6P087-2|RPUSD3', 'ENSG00000156990|ENST00000383820|RPUSD3', 'nc|ENSG00000156990|Q6P087|RPUSD3'] 32251 9017 GFAAHSLTNS True PC9_epitope_Rep2 1003.47230844035 1003.47120993586 40.034 2 -1.3677780061454086 0.39942696134961303 1.0 ['ENST00000531585.1_1_11:126862365-126865054:+|nuORF'] 118971 13044 VAEALSTF True PC9_epitope_Rep6 836.42798401688 836.42688993586 61.769 2 -1.3677825437458473 0.39942696134961303 1.0 ['nc|ENSG00000174792|Q17RF5-2|ODAPH'] 56667 13457 LDKDRYQL True PC9_epitope_Rep5 1049.55055876105 1049.54946993586 56.779 2 -1.3677846844851065 0.39942696134961303 1.0 ['ENST00000452439.1_1_19:50017588-50028245:+|nuORF'] 7309 24168 ARKPPVIKQV True PC9_epitope_Rep4 1134.7237125261 1134.7220549037902 101.44 3 -1.3678917691389432 0.39943891682417415 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 83872 9874 PVPENWLHKEA True NCI_RA007_Epitope_Rep4 1318.66698549562 1318.6658899358602 44.828 2 -1.3679725535019382 0.39943891682417415 1.0 ['ENSG00000168496|ENST00000305885|FEN1', 'nc|ENSG00000168496|P39748-2|FEN1'] 34404 10361 GPGWGGAH True PC9_epitope_Rep6 737.32452200785 737.3239749679301 50.575 1 -1.367989255688969 0.39943891682417415 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 114681 23475 TQGGYVKI True H1975_Epitope_Rep3 864.4705175351999 864.46942993586 97.967 2 -1.3679977347585284 0.39943891682417415 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.W1086Lfs*3|1|0.38|ENSG00000115760|chr2:32433650-32433651|-/T|frameshift_variant', 'BIRC6|p.H1347Qfs*14|1|0.07|ENSG00000115760|chr2:32442160-32442161|-/AC|frameshift_variant'] 108662 21294 SYQKMPLF True NCI_RA007_Epitope_Rep5 1012.5051887917599 1012.50408993586 88.956 2 -1.3680166030587573 0.39943891682417415 1.0 ['USP29|p.C232Sfs*2|1|0.37|ENSG00000131864|chr19:57129369-57129370|-/C|frameshift_variant', 'ENSG00000131864|ENST00000254181|USP29'] 85095 13382 QEKTVNFIKDT True NCI_RA007_Epitope_Rep1 1321.6877805098497 1321.6866899358602 56.056 2 -1.3680398796121387 0.39943891682417415 1.0 ['nc|ENSG00000075790|Q9UHQ4-2|BCAP29'] 46725 11054 ITEGFEAVK True PC9_epitope_Rep2 992.5178616504398 992.51676993586 47.838 2 -1.3680462630824177 0.39943891682417415 1.0 ['ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 82080 23140 PMKRCFKR True NCI_RA007_Epitope_Rep5 1064.5735602184398 1064.57246993586 96.261 2 -1.368052863696164 0.39943891682417415 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF', 'SUPT20H|p.R270Kfs*11|1|0.21|ENSG00000102710|chr13:37031794-37031795|-/T|frameshift_variant', 'SUPT20H|p.Q639Lfs*24|1|0.05|ENSG00000102710|chr13:37017321-37017322|-/TTTATTAACAATAGTA|frameshift_variant', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H'] 78035 9621 NVSVEIMVPNS True NCI_RA007_Epitope_Rep1 1187.58562394043 1187.58452993586 41.422 2 -1.3680846486457219 0.39943891682417415 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 112930 11531 TLLHQRKK True H1975_Epitope_Rep1 1022.6348975216999 1022.6338099358601 49.337 2 -1.3681352487172869 0.39943891682417415 1.0 ['nc|ENSG00000153982|Q8N9F7-3|GDPD1', 'nc|ENSG00000153982|Q8N9F7-2|GDPD1', 'ENSG00000153982|ENST00000284116|GDPD1'] 79822 15708 PEFRYTAGI True PC9_epitope_Rep4 1052.52909504048 1052.5279899358602 68.347 2 -1.368289160321199 0.3995173791070325 1.0 ['nc|ENSG00000106624|Q8IUX7-2|AEBP1', 'ENSG00000106624|ENST00000223357|AEBP1'] 7741 7863 ASPPSAGLSSF True H1975_Epitope_Rep2 1019.49237517859 1019.49126993586 35.191 2 -1.3682962657425721 0.3995174938201179 1.0 ['ENST00000578361.5_1_17:79969964-79975195:+|nuORF'] 27316 14927 FLRSLTSPIP True PC9_epitope_Rep4 1129.64954452633 1129.64788490379 65.357 3 -1.368348251899357 0.3995174938201179 1.0 ['ENST00000586888.1_1_19:30157871-30158024:+|nuORF'] 130329 17907 VSKELQAA True PC9_epitope_Rep2 844.4654321547598 844.4648849679301 74.183 1 -1.3683576111479223 0.3995174938201179 1.0 ['CON__Q03247'] 112998 23601 TLLVLLAG True PC9_epitope_Rep5 798.5214904788999 798.52038993586 95.76 2 -1.368360178853539 0.3995174938201179 1.0 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 100437 11887 SLAFGASY True H1975_Epitope_Rep3 814.3861192049001 814.3855749679301 50.873 1 -1.3684226073334986 0.3995174938201179 1.0 ['ENST00000494463.1_1_1:160606951-160616738:-|nuORF', 'nc|ENSG00000117090|Q13291-2|SLAMF1', 'nc|ENSG00000117090|Q13291-3|SLAMF1', 'ENSG00000117090|ENST00000302035|SLAMF1', 'nc|ENSG00000117090|Q13291-4|SLAMF1'] 78692 11934 NYYSTLSFT True PC9_epitope_Rep5 1094.49204082542 1094.49094993586 50.901 2 -1.3684333113489198 0.3995174938201179 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 130185 10770 VSEKLRDL True PC9_epitope_Rep1 958.5447451046199 958.54364993586 46.315 2 -1.368452971153405 0.3995174938201179 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 70861 17402 LYDRGISSSP True H1975_Epitope_Rep3 1093.54038800017 1093.53987496793 72.615 1 -1.3685081817529927 0.3995174938201179 1.0 ['nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 68532 6180 LTGHLCAP True PC9_epitope_Rep1 810.40580910366 810.40470993586 28.588 2 -1.36852270794496 0.3995174938201179 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 10586 22039 CNCTTGWKG True H1975_Epitope_Rep2 968.3844220360799 968.38332993586 91.103 2 -1.368556194336233 0.3995174938201179 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 123335 17479 VGLRWRPL True NCI_RA007_Epitope_Rep2 995.6028691174299 995.60176993586 72.72 2 -1.3685666464832509 0.3995174938201179 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 58744 7350 LESAIDTLA True NCI_RA007_Epitope_Rep2 931.48622716899 931.48512993586 33.212 2 -1.368580341933691 0.3995174938201179 1.0 ['ENSG00000075539|ENST00000358350|FRYL'] 122725 13267 VGGICLWL True NCI_RA007_Epitope_Rep5 859.4625957037899 859.46148993586 57.711 2 -1.3686220724075997 0.3995174938201179 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 101188 10547 SLGYGHTVPL True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 48.3 2 -1.3686433994535194 0.3995174938201179 1.0 ['ENST00000472190.5_1_1:233765551-233807273:+|nuORF'] 20495 19712 EPLRPFLAP True PC9_epitope_Rep5 1038.58621599378 1038.5851099358601 80.867 2 -1.3686942165249827 0.3995174938201179 1.0 ['nc|ENSG00000128276|O75679-2|RFPL3', 'ENSG00000128276|ENST00000249007|RFPL3', 'nc|ENSG00000128253|O75678-3|RFPL2', 'ENSG00000128253|ENST00000652607|RFPL2'] 117590 8810 TVSSFSNG True PC9_epitope_Rep1 797.35554735261 797.35444993586 38.731 2 -1.3687845033673272 0.3995174938201179 1.0 ['ENSG00000137218|ENST00000373018|FRS3'] 50117 24659 KKKKGGGG True NCI_RA007_Epitope_Rep3 758.4762716219798 758.47516993586 106.64 2 -1.368853482844339 0.3995174938201179 1.0 ['nc|ENSG00000100490|Q00532-2|CDKL1'] 12001 6056 DHRQHEDP True H1975_Epitope_Rep2 1032.4373199139598 1032.4362299358602 28.272 2 -1.3688577300779605 0.3995174938201179 1.0 ['ENST00000552495.1_2_12:113623643-113624655:+|nuORF'] 116472 15117 TTLTSRRTTRI True H1975_Epitope_Rep3 1304.75244645508 1304.7513499358602 63.547 2 -1.36891064249607 0.3995174938201179 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 123337 21131 VGLSLHMTL True PC9_epitope_Rep2 969.5317378927701 969.53064993586 86.74 2 -1.3689260855611056 0.3995174938201179 1.0 ['ENST00000479543.1_3_11:35282443-35283261:-|nuORF'] 97115 5223 SDKSVKVWD True PC9_epitope_Rep6 1062.53457434374 1062.53346993586 27.859 2 -1.3690187275016348 0.39952463010279876 1.0 ['ENSG00000140395|ENST00000267973|SKIC8'] 122858 4564 VGGWWGGW True PC9_epitope_Rep5 903.4027723285499 903.40166993586 22.62 2 -1.3690416982665816 0.3995317662158629 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 101163 7761 SLGSPVHHSP True H1975_Epitope_Rep2 1016.5039429218002 1016.50284993586 34.804 2 -1.3690937947465929 0.3995341541094263 1.0 ['nc|ENSG00000099260|Q9NP74-3|PALMD', 'nc|ENSG00000099260|Q9NP74-2|PALMD', 'ENSG00000099260|ENST00000263174|PALMD'] 44435 14253 ILHSASFFMLY True H1975_Epitope_Rep2 1327.66348033831 1327.6618349037901 59.974 3 -1.3690947803186726 0.3995341541094263 1.0 ['ENSG00000177174|ENST00000317861|OR14C36'] 3536 7162 AGLQPTNL True PC9_epitope_Rep6 812.43921740692 812.43812993586 36.628 2 -1.3692390349803834 0.39955317353741576 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 107984 14771 SWGLGQPW True NCI_RA007_Epitope_Rep2 929.4395517600899 929.43900496793 62.129 1 -1.369311241290582 0.39956269607377126 1.0 ['ENST00000594984.1_1_19:50385622-50386129:+|nuORF'] 46636 9340 ITDISKNSV True PC9_epitope_Rep5 975.52367530687 975.52256993586 40.879 2 -1.3693230899028532 0.39956269607377126 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 50118 25382 KKKKGGGG True PC9_epitope_Rep4 758.4762716219798 758.47516993586 106.53 2 -1.3693480939299463 0.39956269607377126 1.0 ['nc|ENSG00000100490|Q00532-2|CDKL1'] 17885 6339 EHWLSKAQ True NCI_RA007_Epitope_Rep2 997.4981292653699 997.49702993586 29.263 2 -1.3695097524525128 0.3996007319913492 1.0 ['ENST00000576738.1_1_17:77895900-77899665:-|nuORF'] 36313 5082 GVEHRPGVGL True PC9_epitope_Rep4 1019.5512274673898 1019.55012993586 26.198 2 -1.3695163470682101 0.3996007319913492 1.0 ['ENST00000423620.6_1_8:95653352-95653454:+|nuORF'] 61851 11909 LLCALKGAR True PC9_epitope_Rep3 943.5637067273899 943.56260993586 50.828 2 -1.369569904824314 0.3996316321074208 1.0 ['nc|ENSG00000182912|P59090-2|TSPEAR-AS2'] 49979 25677 KISTLLKLT True PC9_epitope_Rep1 1015.66413196131 1015.66357496793 103.8 1 -1.3696225741377337 0.3996506487950948 1.0 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 81530 15306 PLIAIHKARY True H1975_Epitope_Rep3 1180.70806246196 1180.7069699358601 64.285 2 -1.3697001631615056 0.39966966503083523 1.0 ['nc|ENSG00000167220|Q9H0R4-2|HDHD2', 'ENST00000588183.5_1_18:44635055-44662674:-|nuORF', 'ENSG00000167220|ENST00000300605|HDHD2'] 12507 17809 DKHSKKAKKEK True NCI_RA007_Epitope_Rep5 1325.77793292693 1325.7768299358602 75.296 2 -1.3697252256384493 0.39967679840300385 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 49978 24852 KISTLLKLT True NCI_RA007_Epitope_Rep5 1015.66413196131 1015.66357496793 103.08 1 -1.369793977872225 0.3996815665026972 1.0 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 64268 15307 LPHLVQERL True PC9_epitope_Rep2 1103.6451278522302 1103.64402993586 64.16 2 -1.3698619204502187 0.3996815665026972 1.0 ['ENST00000513693.1_1_5:7690761-7690995:+|nuORF'] 22394 8560 ETEFIAWGP True H1975_Epitope_Rep1 1048.4865615221597 1048.48546993586 37.852 2 -1.3699193233936364 0.3996815665026972 1.0 ['ENSG00000196581|ENST00000378191|AJAP1'] 81605 14883 PLLALTTT True NCI_RA007_Epitope_Rep5 828.4956696538801 828.49456993586 63.917 2 -1.3699345871034834 0.3996815665026972 1.0 ['PI4KB|p.R366Efs*33|1|0.12|ENSG00000143393|chr1:151307660-151307660|G/-|frameshift_variant'] 22544 16236 ETHRRSLRNWQ True NCI_RA007_Epitope_Rep4 1481.7599914470097 1481.75888993586 70.411 2 -1.3700513408534805 0.3996839691572907 1.0 ['ENST00000496607.5_1_21:47686374-47686602:-|nuORF'] 128362 6097 VPQWEVFFKRN True PC9_epitope_Rep4 1448.7564692063595 1448.75482490379 30.46 3 -1.370140882326055 0.3996839691572907 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 19996 10955 ELWTYVRWYTQ True PC9_epitope_Rep1 1543.74596409231 1543.74430490379 47.026 3 -1.3701607453539613 0.3996839691572907 1.0 ['ENST00000482889.1_1_1:109472820-109486481:-|nuORF', 'nc|ENSG00000121940|Q96S66-2|CLCC1', 'ENSG00000121940|ENST00000369969|CLCC1'] 135990 15351 WQQKIAMK True H1975_Epitope_Rep3 1031.5586213469498 1031.5575299358602 64.457 2 -1.3702211892392941 0.3996839691572907 1.0 ['DCBLD2|p.S511Vfs*9|1|0.2|ENSG00000057019|chr3:98811239-98811239|T/-|frameshift_variant', 'DCBLD2|p.E506Nfs*14|1|0.4|ENSG00000057019|chr3:98811254-98811254|C/-|frameshift_variant', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENSG00000057019|ENST00000326840|DCBLD2', 'ENST00000494614.5_1_3:98520348-98531278:-|nuORF', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 139466 21487 YLQQWLKAFV True PC9_epitope_Rep6 1294.7073937556197 1294.70575490379 95.523 3 -1.370224932308022 0.3996839691572907 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 8452 6065 ATPQCQINQ True PC9_epitope_Rep6 1001.46002950449 1001.4589299358599 31.705 2 -1.3702259531716712 0.3996839691572907 1.0 ['nc|ENSG00000144837|Q53H76-4|PLA1A', 'nc|ENSG00000144837|Q53H76-3|PLA1A', 'ENSG00000144837|ENST00000273371|PLA1A'] 59924 11441 LGGPNPGSRGL True PC9_epitope_Rep4 1023.5461420869499 1023.54504993586 51.776 2 -1.370251870464128 0.3996839691572907 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 69959 18765 LVLGKKVG True PC9_epitope_Rep3 812.5483739330799 812.54726993586 77.4 2 -1.370274608013034 0.39968635278183695 1.0 ['ENST00000237172.11_1_6:76203241-76203376:-|nuORF'] 4079 7418 AHLYQGLGPVV True PC9_epitope_Rep2 1152.62914343492 1152.6274949037902 33.91 3 -1.3702994010145806 0.39968635278183695 1.0 ['nc|ENSG00000102145|P15976-3|GATA1', 'ENSG00000102145|ENST00000376670|GATA1'] 140567 24688 YRPRRRSLGD True PC9_epitope_Rep4 1274.6956002852999 1274.6945099358602 103.46 2 -1.3703174674281813 0.39969348476928196 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 128086 10916 VPLDTLKGL True PC9_epitope_Rep5 954.57498260374 954.57388993586 46.978 2 -1.3704568248637745 0.3996958680827809 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENST00000515784.1_1_5:110428046-110430680:+|nuORF'] 75799 11672 NLNLKEWL True PC9_epitope_Rep4 1028.5654805492 1028.5643899358602 52.659 2 -1.3704671730663123 0.3996958680827809 1.0 ['ENST00000509144.2_1_8:106809432-107072670:-|nuORF', 'ENST00000520594.5_1_8:106799777-107072670:-|nuORF', 'ENST00000520078.5_1_8:106810397-107072670:-|nuORF'] 32863 11648 GHRPRHHPK True NCI_RA007_Epitope_Rep3 1120.61147673852 1120.61036993586 52.937 2 -1.370511239966775 0.3997029997029997 1.0 ['ENST00000563392.5_1_16:70367501-70367651:+|nuORF', 'ENST00000443119.7_3_16:70405905-70406055:+|nuORF'] 72828 16408 MPMYFFLRNLS True PC9_epitope_Rep3 1417.6886495403298 1417.68754993586 68.251 2 -1.3705797969768845 0.3997101311537731 1.0 ['ENSG00000177174|ENST00000317861|OR14C36'] 121405 8106 VEVSVLGS True H1975_Epitope_Rep3 788.4279840168799 788.42688993586 36.156 2 -1.3706985728062826 0.3997434039368489 1.0 ['nc|ENSG00000116525|Q9BVG3-2|TRIM62', 'ENSG00000116525|ENST00000291416|TRIM62'] 9581 18981 AWWYYQYQRDK True H1975_Epitope_Rep3 1605.73646203777 1605.73536993586 79.601 2 -1.370701341737043 0.3997434039368489 1.0 ['nc|ENSG00000182132|Q9NZI2|KCNIP1'] 138699 9148 YIMYIFSM True NCI_RA007_Epitope_Rep4 1066.4867618463 1066.4856699358602 42.028 2 -1.3707255798898998 0.3997434039368489 1.0 ['ENST00000266546.10_1_12:7311261-7311372:+|nuORF'] 28930 7305 FTDPGKPESQ True H1975_Epitope_Rep3 1104.50875351872 1104.5076499358602 33.073 2 -1.370801307833829 0.39974341917704076 1.0 ['ENST00000474511.1_1_1:16270449-16270866:-|nuORF'] 65639 12945 LSAHHHRMRRK True H1975_Epitope_Rep3 1427.7792874229501 1427.7781899358602 55.023 2 -1.3708359982575522 0.39974341917704076 1.0 ['nc|nan|A6NN90|C2orf81', 'ENSG00000284308|ENST00000684111|C2orf81'] 100017 15414 SIQKFEEEISN True H1975_Epitope_Rep3 1322.6354105838197 1322.63430993586 64.701 2 -1.3708704489593968 0.39974341917704076 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 35320 3615 GRQKRRRFVW True NCI_RA007_Epitope_Rep1 1387.80615379379 1387.80451490379 18.005 3 -1.3708784547201303 0.39974341917704076 1.0 ['ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 48763 5158 KDKNYAGK True NCI_RA007_Epitope_Rep1 922.4872302284998 922.48612993586 24.146 2 -1.3708902908683958 0.39974341917704076 1.0 ['ENST00000464350.6_1_3:66406477-66420969:+|nuORF', 'ENST00000483224.5_1_3:66354939-66420969:+|nuORF', 'SLC25A26|p.A187Ffs*31|1|0.1|ENSG00000144741|chr3:66362918-66362919|GA/-|frameshift_variant'] 48834 23434 KDVLRRMKKR True PC9_epitope_Rep3 1328.8186926234396 1328.81758993586 95.416 2 -1.370935847249752 0.3997505493852824 1.0 ['ENST00000470936.1_1_3:69134198-69151212:+|nuORF', 'ENSG00000144746|ENST00000273258|ARL6IP5'] 30406 17589 GAELPLAHCQL True PC9_epitope_Rep3 1150.58047899034 1150.57938993586 72.844 2 -1.371076062731484 0.39976955788373364 1.0 ['ENST00000422732.2_10:47098053-47098326:-|nuORF'] 120679 3437 VEIPNSVLMEE True NCI_RA007_Epitope_Rep2 1258.6115043350999 1258.60984490379 18.026 3 -1.3711676142000802 0.3998004442491121 1.0 ['ENST00000418724.1_1_6:33282259-33282403:-|nuORF'] 109457 6787 TDLDTGRPLT True H1975_Epitope_Rep2 1087.5509526838698 1087.54984993586 31.022 2 -1.3713881852159173 0.3998622147786528 1.0 ['DSG1|p.S418L|1|0.23|ENSG00000134760|chr18:31336601-31336601|C/T|missense_variant'] 59925 11532 LGGPNPGSRGL True PC9_epitope_Rep4 1023.5461420869499 1023.54504993586 52.121 2 -1.3714074246118653 0.3998622147786528 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 59207 12158 LFEAVGGS True PC9_epitope_Rep1 778.3861192049 778.38502993586 51.629 2 -1.3714346462902112 0.3998764713567959 1.0 ['ENSG00000147614|ENST00000285393|ATP6V0D2'] 113260 5872 TLRFRGAL True PC9_epitope_Rep2 932.5555845718399 932.55448993586 27.982 2 -1.3714569669651018 0.3998764713567959 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 15570 5622 EAQISWFAP True H1975_Epitope_Rep2 1047.5025459394699 1047.5014499358601 26.624 2 -1.3715298883187705 0.3998954770049411 1.0 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36', 'DHX36|p.G235Afs*25|1|0.5|ENSG00000174953|chr3:154309762-154309762|C/-|frameshift_variant', 'ENST00000491011.1_1_3:154032747-154042037:-|nuORF'] 136826 16162 YACCFEWVI True PC9_epitope_Rep5 1132.4721744113199 1132.47052490379 67.156 3 -1.3715543890094477 0.39989785495403474 1.0 ['ENSG00000145555|ENST00000513610|MYO10'] 56257 11549 LCTHRGGA True NCI_RA007_Epitope_Rep1 813.3915560218499 813.39044993586 48.892 2 -1.3715757226514744 0.39989785495403474 1.0 ['ENST00000369303.8_1_6:94124469-94129072:-|nuORF'] 44820 14871 INALRRCFFWR True NCI_RA007_Epitope_Rep1 1480.7873924951598 1480.7862899358602 61.903 2 -1.3716311441586644 0.3999168596710018 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR', 'nc|ENSG00000001626|P13569-3|CFTR'] 16797 6767 EEVHESVDSD True H1975_Epitope_Rep3 1144.45202648824 1144.45039490379 30.984 3 -1.3716916006926816 0.3999239868877381 1.0 ['ENSG00000165156|ENST00000395571|ZHX1'] 42130 9006 IDNLDTRLPRI True PC9_epitope_Rep4 1324.74629844548 1324.7452099358602 42.205 2 -1.3717178262646041 0.39993111393517583 1.0 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-3|SUV39H2'] 125360 4446 VIQSYNIR True NCI_RA007_Epitope_Rep3 991.5450794577899 991.5439899358599 24.29 2 -1.3719114694165575 0.39994774408855 1.0 ['nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 110802 4626 TGLDGLPGPK True NCI_RA007_Epitope_Rep2 953.5181960036099 953.51708993586 22.619 2 -1.3719564415702752 0.39994774408855 1.0 ['COL4A5|p.G1051Dfs*101|1|0.25|ENSG00000188153|chrX:108626254-108626254|G/-|frameshift_variant', 'ENST00000483338.1_1_X:107826116-107869594:+|nuORF'] 29255 6934 FTYTLDEKVDK True H1975_Epitope_Rep3 1357.6765471198098 1357.6754499358601 31.633 2 -1.3719801767243094 0.39994774408855 1.0 ['ENSG00000165509|ENST00000298296|MAGEC3'] 128658 27189 VPVIESYE True PC9_epitope_Rep3 934.4647634484201 934.46366993586 111.88 2 -1.3720002025830385 0.39994774408855 1.0 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 89444 5641 QYEERWQWHRL True NCI_RA007_Epitope_Rep2 1629.7800581852498 1629.77896993586 26.555 2 -1.3721463507996692 0.3999548704306311 1.0 ['ST6GALNAC3|p.K145Qfs*53|1|0.3|ENSG00000184005|chr1:76412219-76412220|-/T|frameshift_variant'] 53571 13385 KRRARLVV True NCI_RA007_Epitope_Rep4 996.6668663563198 996.66576993586 58.657 2 -1.372168175829409 0.3999572466866182 1.0 ['ENSG00000162738|ENST00000368061|VANGL2'] 15105 5922 DYVYDVMWSPV True NCI_RA007_Epitope_Rep1 1372.6009396513998 1372.5998499358602 27.086 2 -1.3721695749832699 0.3999572466866182 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 92406 17868 RLQCFMKY True NCI_RA007_Epitope_Rep4 1087.5306923469498 1087.52958993586 77.356 2 -1.372215559266788 0.3999596228297271 1.0 ['ENSG00000036448|ENST00000262113|MYOM2'] 121111 19674 VERKLAHRK True NCI_RA007_Epitope_Rep2 1135.6938093801498 1135.6927099358602 81.477 2 -1.3722324592786133 0.3999596228297271 1.0 ['nc|ENSG00000186583|Q76KD6-2|SPATC1', 'ENSG00000186583|ENST00000377470|SPATC1'] 82272 19418 PPGGGSGG True NCI_RA007_Epitope_Rep4 584.25543938852 584.25489496793 83.958 1 -1.3722568640836186 0.39998574957248717 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.P569L|1|0.27|ENSG00000169047|chr2:226797033-226797033|G/A|missense_variant'] 53937 22059 KTRVSHLRP True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 91.18 2 -1.372281221407873 0.39998574957248717 1.0 ['ENSG00000198173|ENST00000358047|FAM47C', 'FAM47C|p.H581Ifs*244|1|0.17|ENSG00000198173|chrX:37010149-37010149|C/-|frameshift_variant'] 63960 11953 LNTEANVVR True NCI_RA007_Epitope_Rep1 1014.54580773378 1014.5447099358599 50.48 2 -1.372323311110744 0.4000047500860953 1.0 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 86609 12622 QLELHRQVMFR True H1975_Epitope_Rep1 1455.7768873811099 1455.77578993586 53.601 2 -1.3723581030225105 0.4000118750742192 1.0 ['CHD4|p.C567R|1|0.29|ENSG00000111642|chr12:6598087-6598087|A/G|missense_variant'] 80687 5119 PGVSVSNSLN True PC9_epitope_Rep5 972.4876241513201 972.48652993586 24.715 2 -1.3723896136487683 0.4000189998931256 1.0 ['ENST00000540883.1_1_12:65116746-65122837:-|nuORF'] 122857 4470 VGGWWGGW True PC9_epitope_Rep5 903.4027723285499 903.40166993586 22.261 2 -1.3724691160574798 0.40004512099551165 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 43656 5322 IHDGDTVSV True PC9_epitope_Rep2 941.4454249861701 941.44432993586 25.86 2 -1.37247281755075 0.40004512099551165 1.0 ['nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 3535 15963 AGLQKKHW True NCI_RA007_Epitope_Rep3 966.5399345076999 966.53882993586 70.464 2 -1.3725100264755286 0.40004512099551165 1.0 ['ENST00000515803.5_1_5:16711340-16738347:-|nuORF'] 128452 7512 VPSDYRVK True PC9_epitope_Rep3 962.5185303567799 962.51742993586 33.898 2 -1.3725121703593146 0.40004512099551165 1.0 ['ENSG00000149218|ENST00000278505|ENDOD1', 'ENDOD1|p.K212N|1|0.39|ENSG00000149218|chr11:95128712-95128712|A/T|missense_variant'] 25635 13781 FENYYRKQRKK True NCI_RA007_Epitope_Rep1 1558.8368447853798 1558.8357499358601 57.622 2 -1.3725431783987343 0.40004512099551165 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 2022 17846 AEKERKFVI True PC9_epitope_Rep3 1118.64479349906 1118.64368993586 73.84 2 -1.3725611611681816 0.40004512099551165 1.0 ['ENSG00000178795|ENST00000315938|GDPD4', 'nc|ENSG00000178795|Q6W3E5|GDPD4'] 23423 7859 EVSYPVPWSS True NCI_RA007_Epitope_Rep1 1149.5342399905699 1149.5331499358601 34.562 2 -1.3725654469642923 0.40004512099551165 1.0 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF'] 80033 10945 PFGGSSEG True PC9_epitope_Rep1 736.30278350376 736.3022349679301 46.988 1 -1.3727377494016568 0.40008311564948945 1.0 ['ENST00000592486.1_1_19:1475033-1475351:-|nuORF'] 16990 12715 EGAHGPGR True NCI_RA007_Epitope_Rep3 779.36744944899 779.36690496793 57.251 1 -1.3727560782865613 0.40008311564948945 1.0 ['ENST00000476932.5_1_2:128412197-128421974:-|nuORF'] 141603 12030 YTRMDNHLEEL True H1975_Epitope_Rep2 1419.64526407487 1419.6441699358602 51.354 2 -1.3728329331317282 0.40010923511671537 1.0 ['ENST00000372722.7_1_20:44037543-44038777:+|nuORF'] 12312 13125 DIPGRHSYAKY True H1975_Epitope_Rep3 1305.64658440421 1305.64548993586 55.732 2 -1.3728361111389389 0.40010923511671537 1.0 ['ENSG00000163751|ENST00000296046|CPA3'] 21971 10733 ESENSCNK True NCI_RA007_Epitope_Rep1 909.34981034917 909.34926496793 45.74 1 -1.3728534449731957 0.40011635776450616 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'PRRC2C|p.E625K|1|0.1|ENSG00000117523|chr1:171535433-171535433|G/A|missense_variant'] 130769 12905 VTADGALA True NCI_RA007_Epitope_Rep5 716.37046914076 716.36992496793 56.321 1 -1.3728668208582744 0.40011872959335115 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 111678 11624 TIERWTKE True H1975_Epitope_Rep2 1061.5505587610498 1061.54946993586 49.78 2 -1.3729210932083766 0.40011872959335115 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1'] 83456 26261 PTPPDELLPQA True PC9_epitope_Rep2 1176.60265390356 1176.60100490379 107.14 3 -1.373110999002621 0.4001733431481965 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 77399 13424 NSFWLNEDLI True H1975_Epitope_Rep3 1249.59790287629 1249.5968099358602 56.906 2 -1.3732626243892339 0.40021133114878665 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A', 'ZNF37A|p.G124V|1|0.64|ENSG00000075407|chr10:38117522-38117522|G/T|missense_variant'] 69772 25970 LVFRKPRGLFI True PC9_epitope_Rep5 1344.8394109846797 1344.83776490379 105.43 3 -1.3732658564071338 0.40021133114878665 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 135437 24006 WHRQDWTI True PC9_epitope_Rep4 1140.54647644012 1140.54484490379 100.81 3 -1.3733107307965995 0.4002137005817405 1.0 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF'] 120965 4994 VEPHSPSPSSK True NCI_RA007_Epitope_Rep5 1150.56185172074 1150.56074993586 25.913 2 -1.373316334337578 0.4002137005817405 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 49200 16005 KEMMKETFKYF True NCI_RA007_Epitope_Rep1 1480.7094445545602 1480.70834993586 66.359 2 -1.3733752792561413 0.4002398138474689 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 82385 23304 PPLMIPIF True PC9_epitope_Rep3 926.52994698762 926.52884993586 94.918 2 -1.3733832305582203 0.4002398138474689 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6', 'SOX6|p.I335Nfs*2|1|0.13|ENSG00000110693|chr11:16096093-16096094|-/T|frameshift_variant'] 32389 19193 GFNWKLNFR True NCI_RA007_Epitope_Rep2 1180.6141620771198 1180.61306993586 79.529 2 -1.3733999620949642 0.4002469340994622 1.0 ['ENSG00000141429|ENST00000269195|GALNT1', 'ENST00000431076.5_1_2:155098684-155265690:+|nuORF', 'nc|ENSG00000144278|Q8IUC8-2|GALNT13', 'ENSG00000144278|ENST00000392825|GALNT13', 'nc|ENSG00000144278|Q8IUC8-3|GALNT13'] 15009 16122 DYKGDATVFF True PC9_epitope_Rep1 1161.5342399905699 1161.5331499358601 66.829 2 -1.3735873160834278 0.4002896692546953 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 82903 4464 PSAGNLHPSLK True NCI_RA007_Epitope_Rep5 1119.6036569630699 1119.60254993586 23.816 2 -1.3736118115436065 0.40029678874577074 1.0 ['ENST00000521506.1_1_5:171682090-171682429:-|nuORF'] 112091 20311 TIVFNKLS True NCI_RA007_Epitope_Rep3 920.53311779176 920.53202993586 88.491 2 -1.3737133092291922 0.40031102722081746 1.0 ['ENSG00000150051|ENST00000419761|MKX'] 71244 22585 LYPLKYYTS True NCI_RA007_Epitope_Rep5 1146.59611197114 1146.5944649037901 94.055 3 -1.3737203610927524 0.40031102722081746 1.0 ['ENST00000456533.1_1_7:7607061-7607097:+|nuORF'] 139666 12599 YMVVYLVI True PC9_epitope_Rep6 998.5510763550197 998.54996993586 59.915 2 -1.3738825314496992 0.40036563071297987 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 128508 11219 VPSQLRAFTVP True PC9_epitope_Rep3 1213.68190728377 1213.68080993586 48.162 2 -1.373922100281613 0.4003846199503793 1.0 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 79310 8091 PAQPPVRPAQP True H1975_Epitope_Rep3 1156.63529144452 1156.6341899358601 36.096 2 -1.3739271859354625 0.4003917378917379 1.0 ['ENST00000486149.2_1_6:30954274-30955276:+|nuORF'] 23549 8846 EVWLDSPGY True H1975_Epitope_Rep1 1064.48147614172 1064.4803699358602 38.948 2 -1.3740040321273557 0.40039885566410655 1.0 ['TBKBP1|p.D29Y|1|0.42|ENSG00000198933|chr17:47696197-47696197|G/T|missense_variant'] 138879 15196 YKERFWRKKDY True PC9_epitope_Rep5 1617.8415958126498 1617.8404899358602 63.458 2 -1.3740083627443183 0.4004059732674913 1.0 ['MAOB|p.P304R|1|0.38|ENSG00000069535|chrX:43793436-43793436|G/C|missense_variant'] 53529 20883 KRLSWKIHM True NCI_RA007_Epitope_Rep5 1197.68046781513 1197.67882490379 87.322 3 -1.3740312925965745 0.4004083376857699 1.0 ['ENSG00000016391|ENST00000315251|CHDH'] 58412 11419 LENSQRVTTAL True H1975_Epitope_Rep1 1230.65681473474 1230.6557099358602 48.903 2 -1.3740969725959902 0.4004083376857699 1.0 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF'] 15519 14274 EANMDIVYKDM True H1975_Epitope_Rep3 1327.5788243078298 1327.5777299358601 60.248 2 -1.3741377241611714 0.40041543026706233 1.0 ['ENSG00000050393|ENST00000379170|MCUR1'] 135624 24701 WLKVGAGV True PC9_epitope_Rep4 828.4857736765198 828.4852249679301 103.51 1 -1.374199965519181 0.40041543026706233 1.0 ['ENSG00000164659|ENST00000450689|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-3|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-2|ELAPOR2'] 135623 25433 WLKVGAGV True PC9_epitope_Rep2 828.4857736765198 828.4852249679301 103.51 1 -1.37421684253992 0.40041543026706233 1.0 ['ENSG00000164659|ENST00000450689|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-3|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-2|ELAPOR2'] 107381 12514 SVLKSKAEL True PC9_epitope_Rep1 973.5807962601699 973.57968993586 53.003 2 -1.374237828053241 0.40041543026706233 1.0 ['ENST00000548436.5_1_12:50026868-50028386:+|nuORF', 'PRPF40B|p.K787Efs*7|1|0.33|ENSG00000110844|chr12:49643732-49643736|AAGAA/-|frameshift_variant', 'nc|ENSG00000110844|Q6NWY9-2|PRPF40B', 'nc|ENSG00000110844|Q6NWY9-3|PRPF40B', 'nc|ENSG00000110844|Q6NWY9|PRPF40B', 'ENSG00000110844|ENST00000548825|PRPF40B'] 82620 16711 PQGILHTR True NCI_RA007_Epitope_Rep5 920.51919906312 920.51865496793 71.044 1 -1.374252504542772 0.40041543026706233 1.0 ['ENSG00000138356|ENST00000374700|AOX1', 'AOX1|p.D1234G|1|0.29|ENSG00000138356|chr2:200668706-200668706|A/G|missense_variant'] 40673 20244 HRQRILQAIQL True NCI_RA007_Epitope_Rep2 1374.82080079842 1374.8191649037901 83.776 3 -1.3742591683918692 0.40041543026706233 1.0 ['ENST00000552245.5_1_12:99225710-99548222:-|nuORF', 'nc|ENSG00000185046|Q7Z6G8-8|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-10|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-7|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-2|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-5|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-4|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-3|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-6|ANKS1B', 'ANKS1B|p.I919Nfs*5|1|0.5|ENSG00000185046|chr12:99053179-99053180|-/T|frameshift_variant', 'ANKS1B|p.Y1148Ifs*6|1|0.48|ENSG00000185046|chr12:98773105-98773105|G/-|frameshift_variant', 'nc|ENSG00000185046|Q7Z6G8|ANKS1B', 'ENSG00000185046|ENST00000683438|ANKS1B'] 16843 21337 EFALLRDFV True PC9_epitope_Rep5 1108.59169529704 1108.5905899358602 87.13 2 -1.3743021386826821 0.4004177942363386 1.0 ['nc|ENSG00000100167|Q9UH03-2|SEPTIN3', 'nc|ENSG00000100167|Q9UH03|SEPTIN3', 'ENSG00000100167|ENST00000644076|SEPTIN3'] 100693 8019 SLDPASAK True PC9_epitope_Rep1 787.40758292547 787.40648993586 35.666 2 -1.3743095754870402 0.4004177942363386 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 12288 10155 DILVFGALIY True PC9_epitope_Rep2 1122.63249747986 1122.6308549037901 44.398 3 -1.374392090747476 0.4004486487128055 1.0 ['DOCK2|p.D675G|1|0.07|ENSG00000134516|chr5:169716295-169716295|A/G|missense_variant'] 18120 16479 EIINYRDGMG True PC9_epitope_Rep1 1166.53900810118 1166.5379099358602 68.212 2 -1.3744704988706538 0.4004510118093882 1.0 ['ENSG00000171723|ENST00000478722|GPHN', 'nc|ENSG00000171723|Q9NQX3|GPHN'] 28002 20443 FQLIHEEL True PC9_epitope_Rep1 1027.53384606775 1027.5332749679299 83.447 1 -1.3744915511998175 0.4004510118093882 1.0 ['ENST00000522166.1_1_8:57125296-57125371:+|nuORF'] 79834 9785 PEGSGWPR True NCI_RA007_Epitope_Rep5 884.41406528824 884.41296993586 44.287 2 -1.3745712914258446 0.40045812761109 1.0 ['ENST00000354619.9_1_1:236445094-236445265:-|nuORF'] 31849 8275 GEKLGWPQYNW True H1975_Epitope_Rep1 1376.6513354314798 1376.6502299358601 36.763 2 -1.3746557936607977 0.4004960953262598 1.0 ['ENSG00000159640|ENST00000290866|ACE', 'ENST00000579314.5_1_17:61565977-61574724:+|nuORF', 'ENST00000578839.5_1_17:61562212-61574724:+|nuORF', 'nc|ENSG00000159640|P12821-4|ACE', 'nc|ENSG00000159640|P12821-3|ACE'] 123206 19154 VGLEKPSLEP True H1975_Epitope_Rep1 1067.58627556343 1067.5851699358602 79.822 2 -1.3746658153822031 0.4004960953262598 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 112427 7489 TLDARGKTP True NCI_RA007_Epitope_Rep1 957.5243440132099 957.52324993586 33.122 2 -1.374751961242369 0.4005103251839544 1.0 ['ENST00000427199.2_1_5:114916936-114937963:-|nuORF'] 65527 22771 LRQRKRGREP True PC9_epitope_Rep4 1294.7694339319 1294.76779490379 95.808 3 -1.3747640656388598 0.4005103251839544 1.0 ['ENST00000460658.5_1_22:31491456-31491618:+|nuORF'] 58566 12515 LEQMIHIVF True PC9_epitope_Rep1 1128.6001518057599 1128.5985149037901 53.008 3 -1.3748264517054332 0.4005126866203033 1.0 ['ENST00000515261.1_1_4:186444434-186456588:-|nuORF'] 66008 11211 LSEAYLAFQEL True NCI_RA007_Epitope_Rep1 1282.6445187155398 1282.64342993586 47.607 2 -1.3748477361052382 0.4005126866203033 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 126153 21310 VLFFIPYWAFY True H1975_Epitope_Rep1 1464.74819593844 1464.74708993586 88.526 2 -1.3748726045536426 0.4005198010989402 1.0 ['ATP8B4|p.G975W|1|0.26|ENSG00000104043|chr15:49876382-49876382|C/A|missense_variant'] 41037 17579 HTKCRIIHTD True H1975_Epitope_Rep2 1222.6240751378198 1222.62296993586 72.928 2 -1.37500773350653 0.4005221622263099 1.0 ['nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1', 'SRPK1|p.Q513Sfs*12|1|0.17|ENSG00000096063|chr6:35857344-35857345|-/CT|frameshift_variant'] 135286 6909 WFSWVLPLTGP True H1975_Epitope_Rep1 1301.6808446546097 1301.6797499358602 31.617 2 -1.3750807554158273 0.4005221622263099 1.0 ['ENSG00000244476|ENST00000472091|ERVFRD-1'] 60458 4666 LGWEALMQFVP True NCI_RA007_Epitope_Rep3 1289.64783027417 1289.64619490379 25.286 3 -1.375104056553316 0.4005245232416011 1.0 ['ALG11|p.C167F|1|0.1|ENSG00000253710|chr13:52024230-52024230|G/T|missense_variant'] 82515 16575 PPRQSQVPRL True NCI_RA007_Epitope_Rep5 1176.6727395823998 1176.6716499358602 70.514 2 -1.3751042610265107 0.4005245232416011 1.0 ['ENST00000460881.5_1_20:36841446-36845354:-|nuORF', 'ENST00000487506.1_1_20:36841446-36845915:-|nuORF', 'ENSG00000149633|ENST00000279024|KIAA1755'] 43615 11755 IGVFSVLYTVP True NCI_RA007_Epitope_Rep2 1193.66961126457 1193.6685099358601 50.322 2 -1.3752090128576206 0.400602838562681 1.0 ['ENSG00000157240|ENST00000287934|FZD1', 'ENSG00000155760|ENST00000286201|FZD7', 'ENSG00000174804|ENST00000531380|FZD4', 'ENSG00000180340|ENST00000315323|FZD2'] 40594 8044 HRHRLTRWLWT True NCI_RA007_Epitope_Rep1 1560.8538322621996 1560.85219490379 35.286 3 -1.375302207119732 0.4006123102846768 1.0 ['ENST00000264560.11_1_19:747626-748151:+|nuORF'] 102268 11443 SLSKTEPTQSQ True NCI_RA007_Epitope_Rep1 1204.59354577184 1204.59244993586 48.475 2 -1.3753336994665466 0.4006123102846768 1.0 ['ENSG00000167094|ENST00000373289|TTC16', 'ENST00000488285.1_1_9:130486913-130493681:+|nuORF', 'ENST00000489226.5_1_9:130492547-130493681:+|nuORF'] 115497 22651 TRPRGVGL True PC9_epitope_Rep2 854.5086343794198 854.50752993586 92.624 2 -1.3753919018569851 0.4006123102846768 1.0 ['ENST00000416281.6_1_11:67048455-67049666:+|nuORF'] 82384 18705 PPLMIPIF True NCI_RA007_Epitope_Rep4 926.52994698762 926.52884993586 80.924 2 -1.3754870059702362 0.40065502183406115 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6', 'SOX6|p.I335Nfs*2|1|0.13|ENSG00000110693|chr11:16096093-16096094|-/T|frameshift_variant'] 140929 13846 YSELPVVKKM True H1975_Epitope_Rep3 1192.6525813014398 1192.6514899358601 58.568 2 -1.3755334680155547 0.4006621337795023 1.0 ['nc|ENSG00000008128|Q9UQ88|CDK11A', 'nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'ENST00000478901.1_1_1:1634913-1635060:-|nuORF'] 50027 25441 KKAVRTRY True PC9_epitope_Rep3 1020.6192474575598 1020.61814993586 103.3 2 -1.3755903418676108 0.40067635716404626 1.0 ['ENSG00000123989|ENST00000243776|CHPF'] 88182 4060 QRVRQEESEQ True H1975_Epitope_Rep2 1287.61674082791 1287.6151049037899 20.703 3 -1.3755978876765906 0.40067635716404626 1.0 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'KRT7|p.I95M|1|0.45|ENSG00000135480|chr12:52233581-52233581|C/G|missense_variant'] 58638 13791 LERDYHSL True PC9_epitope_Rep1 1031.50360856863 1031.5025099358602 57.892 2 -1.3758076737368543 0.4007190232674031 1.0 ['nc|ENSG00000198055|P43250-3|GRK6', 'ENSG00000198055|ENST00000355472|GRK6', 'nc|ENSG00000198055|P43250-2|GRK6'] 132636 22734 VVFPGLFLL True PC9_epitope_Rep1 1003.6106398364699 1003.60954993586 92.251 2 -1.3758584930903501 0.4007190232674031 1.0 ['ENSG00000149926|ENST00000380495|TLCD3B'] 78950 7391 PAHGSHTP True PC9_epitope_Rep5 802.3722004762601 802.37110993586 33.386 2 -1.375859771466483 0.4007190232674031 1.0 ['nc|ENSG00000180525|Q8N8Z3|DIP2C-AS1'] 11269 22528 DEGHCGRR True NCI_RA007_Epitope_Rep2 928.3933469269999 928.39224993586 93.691 2 -1.375880351975475 0.4007190232674031 1.0 ['ENST00000503552.1_1_1:17316691-17319005:-|nuORF', 'ENST00000326735.12_1_1:17316691-17319005:-|nuORF'] 126103 12631 VLEQITSFALG True H1975_Epitope_Rep1 1176.63903941228 1176.6379499358602 53.636 2 -1.3758844318058598 0.4007190232674031 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 84419 6580 QADRLFED True PC9_epitope_Rep5 992.4563240230399 992.45522993586 30.28 2 -1.3759013519286294 0.4007190232674031 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 78298 13604 NYINDLRNF True PC9_epitope_Rep4 1167.56727145435 1167.5661699358602 60.222 2 -1.3759415165583235 0.4007261336940272 1.0 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 11408 23990 DETIMKSRNN True H1975_Epitope_Rep3 1206.56628547818 1206.56464490379 99.986 3 -1.3760045822584295 0.4007332439519239 1.0 ['nc|ENSG00000293458|O60774|FMO6P'] 92121 19860 RLAWPLRLGP True H1975_Epitope_Rep3 1177.7083968151298 1177.7072899358602 83.149 2 -1.3764109730862166 0.4008067864981907 1.0 ['ENSG00000063515|ENST00000086933|GSC2'] 118978 7334 VAEEELLNMLP True NCI_RA007_Epitope_Rep1 1256.6322397796798 1256.63114993586 32.521 2 -1.3764227661569568 0.4008067864981907 1.0 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 61454 14353 LIYKVRIE True PC9_epitope_Rep1 1032.6331661861998 1032.63206993586 60.033 2 -1.3765599980581877 0.40082575991267827 1.0 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1'] 86662 17926 QLHRRKVIS True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6921649037902 78.546 3 -1.3766147272187803 0.4008541938545498 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 122289 8299 VGAVNVAK True NCI_RA007_Epitope_Rep1 756.4493881678 756.44828993586 36.282 2 -1.3766768839885477 0.4008541938545498 1.0 ['ENSG00000167676|ENST00000301286|PLIN4'] 19010 12451 ELERVLQAP True PC9_epitope_Rep3 1053.5818588893299 1053.5807699358602 52.917 2 -1.3766790026498563 0.4008541938545498 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1'] 110072 4714 TELPRDVTV True H1975_Epitope_Rep2 1028.5502244078798 1028.54912993586 23.223 2 -1.3767061175978814 0.4008541938545498 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 40931 20841 HSSPEGKEEPE True H1975_Epitope_Rep2 1224.5258601348398 1224.5242049037902 86.294 3 -1.376763854255111 0.40086125083040713 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 116780 19392 TVDSVSQVAP True PC9_epitope_Rep4 1001.5029398622898 1001.50184993586 82.701 2 -1.3768085159877788 0.40086125083040713 1.0 ['ENSG00000166073|ENST00000561100|GPR176', 'nc|ENSG00000166073|Q14439-3|GPR176', 'nc|ENSG00000166073|Q14439-2|GPR176'] 3479 8028 AGLFKVSD True NCI_RA007_Epitope_Rep4 835.44396843419 835.44286993586 37.645 2 -1.3768397484947965 0.40086125083040713 1.0 ['ENST00000492115.2_1_9:97041094-97054826:+|nuORF'] 76009 7261 NLWKCNCHL True PC9_epitope_Rep4 1129.51610491197 1129.51444490379 35.24 3 -1.3768582947074746 0.40086125083040713 1.0 ['ENSG00000144771|ENST00000273286|LRTM1', 'nc|ENSG00000144771|Q9HBL6-2|LRTM1'] 10534 11060 CLKRQGGG True NCI_RA007_Epitope_Rep4 817.4228561501297 817.42174993586 49.411 2 -1.3768629548714495 0.40086125083040713 1.0 ['nc|ENSG00000288591|Q9Y2I9-3|TBC1D30', 'ENSG00000111490|ENST00000539867|TBC1D30'] 26782 18490 FKRARTRA True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 76.725 2 -1.376871231979744 0.40086125083040713 1.0 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF'] 113257 16179 TLRFGMFLQDL True PC9_epitope_Rep5 1339.6958430957498 1339.69474993586 67.222 2 -1.3769773321358711 0.40088022112293437 1.0 ['nc|ENSG00000157119|Q2TBA0-2|KLHL40', 'ENSG00000157119|ENST00000287777|KLHL40'] 28703 12823 FSRHSVARELR True H1975_Epitope_Rep1 1356.73746509728 1356.73636993586 54.389 2 -1.3771581955820824 0.40095374796854055 1.0 ['SYT13|p.G256R|1|0.53|ENSG00000019505|chr11:45252501-45252501|C/T|missense_variant'] 37176 13391 GVQQQRPP True PC9_epitope_Rep1 908.4828135543999 908.48170993586 56.368 2 -1.3771916853762436 0.40095374796854055 1.0 ['ENST00000582620.5_1_18:72167208-72179735:+|nuORF', 'ENST00000584581.5_1_18:72178181-72179738:+|nuORF'] 135515 20856 WKFRAMRKI True NCI_RA007_Epitope_Rep5 1234.7121022965798 1234.7110099358601 87.218 2 -1.3772136818236365 0.4009631465951819 1.0 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 124138 10958 VGSRLDAL True PC9_epitope_Rep4 829.4657665079299 829.46521496793 49.92 1 -1.3772628824035398 0.4009631465951819 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57'] 142797 15261 YYRTGTFPETP True PC9_epitope_Rep2 1330.6193665968597 1330.61826993586 63.977 2 -1.3773167875905992 0.4009631465951819 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4', 'nc|ENSG00000026652|Q9NRZ5-2|AGPAT4'] 41843 19735 IAWCWGCV True NCI_RA007_Epitope_Rep5 936.3986155482398 936.39750993586 82.823 2 -1.3773559711410943 0.4009631465951819 1.0 ['ENST00000268261.8_1_16:8942748-8942910:+|nuORF'] 66674 11430 LSKYKQRCL True H1975_Epitope_Rep2 1137.63284891637 1137.6312149037901 49.019 3 -1.377368945206213 0.4009631465951819 1.0 ['SLC28A1|p.R511C|1|0.17|ENSG00000156222|chr15:84935468-84935468|C/T|missense_variant'] 89020 13268 QVKYQDAPAA True PC9_epitope_Rep5 1089.5454733806098 1089.54436993586 56.046 2 -1.3773714698279897 0.4009631465951819 1.0 ['KEAP1|p.R459Pfs*39|1|0.44|ENSG00000079999|chr19:10489797-10489803|ATCCTTC/-|frameshift_variant', 'KEAP1|p.P492Qfs*8|1|0.52|ENSG00000079999|chr19:10489704-10489704|G/-|frameshift_variant', 'KEAP1|p.G477Afs*23|1|0.73|ENSG00000079999|chr19:10489749-10489749|C/-|frameshift_variant', 'KEAP1|p.I500Tfs*4|1|0.43|ENSG00000079999|chr19:10489680-10489680|A/-|frameshift_variant', 'KEAP1|p.E540Rfs*32|1|0.45|ENSG00000079999|chr19:10489278-10489282|GTTTC/-|frameshift_variant', 'KEAP1|p.E593Rfs*2|1|0.75|ENSG00000079999|chr19:10486750-10486750|C/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.L175Wfs*55|1|0.48|ENSG00000079999|chr19:10499511-10499511|G/-|frameshift_variant', 'KEAP1|p.F280Sfs*29|1|0.14|ENSG00000079999|chr19:10492039-10492063|CACTTCTGCAGCTGCATCTGCAGGA/-|frameshift_variant', 'KEAP1|p.K323*|1|0.28|ENSG00000079999|chr19:10491935-10491936|-/A|frameshift_variant', 'KEAP1|p.V420Sfs*38|1|0.56|ENSG00000079999|chr19:10491644-10491644|C/-|frameshift_variant', 'KEAP1|p.V123Rfs*31|1|0.28|ENSG00000079999|chr19:10499658-10499667|CAATGGACAC/-|frameshift_variant'] 64518 17986 LPRKPHRQ True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 78.816 2 -1.377371873673921 0.4009631465951819 1.0 ['ENSG00000173988|ENST00000595396|LRRC63'] 119231 4940 VALAVASK True NCI_RA007_Epitope_Rep5 757.46978925921 757.46868993586 25.702 2 -1.3773905808542997 0.4009631465951819 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2'] 40184 18366 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 76.178 3 -1.3775152504629704 0.4009773571030376 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 56461 9259 LDELSLFGP True H1975_Epitope_Rep3 989.5069626135698 989.50586993586 40.606 2 -1.3775194544402158 0.4009773571030376 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 98004 6882 SEQCAYITSW True H1975_Epitope_Rep3 1186.49647458286 1186.49482490379 31.43 3 -1.3775479297866453 0.40099156693669863 1.0 ['ENST00000371711.4_1_20:48251667-48252051:-|nuORF'] 7748 8541 ASQGNQNN True H1975_Epitope_Rep2 831.34710792723 831.34600993586 37.809 2 -1.3775845121224768 0.40099156693669863 1.0 ['ENSG00000109944|ENST00000227349|JHY'] 80744 21985 PHGAPHSD True H1975_Epitope_Rep2 816.3514650316802 816.35036993586 90.891 2 -1.3776061407345903 0.4009986716007211 1.0 ['nc|ENSG00000248290|Q16473|TNXA'] 60342 18973 LGSNAREESSI True PC9_epitope_Rep4 1161.56257999673 1161.5614899358602 81.069 2 -1.3776283580922897 0.4010010199966791 1.0 ['ENSG00000101126|ENST00000621696|ADNP'] 63112 21209 LLRDCYLL True PC9_epitope_Rep2 1007.5473879569099 1007.54628993586 87.039 2 -1.3776614928872057 0.4010010199966791 1.0 ['nc|ENSG00000117155|Q9Y2D8-2|SSX2IP', 'nc|ENSG00000117155|Q9Y2D8-3|SSX2IP', 'ENSG00000117155|ENST00000342203|SSX2IP'] 124130 3717 VGSQTWSHTLS True H1975_Epitope_Rep3 1201.57275075761 1201.57111490379 19.36 3 -1.3776947177692183 0.4010081242957955 1.0 ['ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 116563 15507 TTWERLYFFTQ True H1975_Epitope_Rep1 1490.7194149912998 1490.7183099358601 64.921 2 -1.3777486087814312 0.4010389487167323 1.0 ['ENST00000547809.5_1_12:105570964-105626916:-|nuORF', 'ENSG00000136044|ENST00000258530|APPL2', 'nc|ENSG00000136044|Q8NEU8-3|APPL2', 'nc|ENSG00000136044|Q8NEU8-2|APPL2'] 135224 24985 WFFKGISRK True PC9_epitope_Rep2 1167.6552986131098 1167.65365490379 101.77 3 -1.377798868121782 0.40104364326375713 1.0 ['HCK|p.A154S|1|0.27|ENSG00000101336|chr20:32079805-32079805|G/T|missense_variant', 'HCK|p.D153H|1|0.29|ENSG00000101336|chr20:32079802-32079802|G/C|missense_variant', 'nc|ENSG00000101336|P08631-3|HCK', 'nc|ENSG00000101336|P08631-2|HCK', 'nc|ENSG00000101336|P08631-4|HCK', 'ENSG00000101336|ENST00000375852|HCK'] 16273 7874 EEFDRLCVPLF True NCI_RA007_Epitope_Rep1 1366.6591232338599 1366.65748490379 34.621 3 -1.377848348109571 0.40104364326375713 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247027247-247061635:-|nuORF'] 45767 12001 ISALRNDPKPL True NCI_RA007_Epitope_Rep1 1222.70337100434 1222.7022699358602 50.669 2 -1.3779208462804162 0.40104364326375713 1.0 ['ENSG00000116128|ENST00000234739|BCL9', 'BCL9|p.Q700Tfs*9|1|0.09|ENSG00000116128|chr1:147620246-147620247|-/C|frameshift_variant'] 24562 8569 FAGNPGEKGN True PC9_epitope_Rep3 989.4566583762099 989.45556993586 37.913 2 -1.3779540127632193 0.40104364326375713 1.0 ['ENSG00000169031|ENST00000396578|COL4A3', 'nc|ENSG00000169031|Q01955-2|COL4A3', 'nc|ENSG00000169031|Q01955-5|COL4A3', 'nc|ENSG00000169031|Q01955-4|COL4A3', 'nc|ENSG00000169031|Q01955-3|COL4A3'] 141195 17624 YSWPWRMY True PC9_epitope_Rep1 1187.5222358382298 1187.52112993586 72.582 2 -1.378067517320991 0.4010744654356566 1.0 ['nc|ENSG00000174151|Q8N8Q1-4|CYB561D1'] 70281 18417 LVRPWEGTKRR True NCI_RA007_Epitope_Rep4 1396.80515073428 1396.8034949037901 79.704 3 -1.3781691743244195 0.40108156827399727 1.0 ['nc|ENSG00000148331|Q9NWX5-2|ASB6'] 106082 15691 STASNTIA True PC9_epitope_Rep3 763.37119741675 763.37010993586 65.497 2 -1.3781991791557986 0.40109577344528247 1.0 ['ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 14498 16802 DTISQISHPSE True PC9_epitope_Rep5 1212.5622456435601 1212.5611499358602 69.637 2 -1.3782165653285208 0.40109577344528247 1.0 ['ENST00000456822.5_1_X:129168440-129168512:+|nuORF'] 126435 11211 VLKPAIAL True NCI_RA007_Epitope_Rep4 823.5531249603499 823.55202993586 50.012 2 -1.3783365304115305 0.40112659353691077 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant'] 5859 25046 APFPHSGL True PC9_epitope_Rep5 824.41808803952 824.41698993586 101.48 2 -1.3783899593249485 0.40113838491639986 1.0 ['ENSG00000205022|ENST00000419291|PABPN1L', 'nc|ENSG00000205022|A6NDY0-4|PABPN1L'] 6252 18305 APQSRLSFLL True PC9_epitope_Rep4 1130.64479349906 1130.64368993586 78.479 2 -1.3784118594608223 0.40113838491639986 1.0 ['nc|ENSG00000154025|A0PJK1-3|SLC5A10'] 20477 10205 EPITPKSDV True H1975_Epitope_Rep2 984.5127762699999 984.51166993586 44.259 2 -1.3784473546314067 0.40113838491639986 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 32056 10681 GERYISGVP True PC9_epitope_Rep3 976.4977949121999 976.49668993586 46.029 2 -1.3785084069531657 0.40113838491639986 1.0 ['GK2|p.A546E|1|0.19|ENSG00000196475|chr4:79406564-79406564|G/T|missense_variant'] 48575 4359 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 21.758 3 -1.378544378907761 0.40113838491639986 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 100447 6571 SLAGGRHP True NCI_RA007_Epitope_Rep1 793.41948502185 793.41838993586 29.573 2 -1.3785475061536931 0.4011454862387497 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'TRPM6|p.P1293Qfs*21|1|0.08|ENSG00000119121|chr9:74762793-74762793|G/-|frameshift_variant', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6'] 99229 4621 SHMAKDIPFK True H1975_Epitope_Rep3 1172.60121443492 1172.59957490379 22.897 3 -1.3786838318531256 0.401147762574403 1.0 ['ENSG00000179270|ENST00000331664|PCARE'] 42459 13073 IEEDFRDGLK True PC9_epitope_Rep2 1220.60371653272 1220.60206490379 55.564 3 -1.3786944064175848 0.401147762574403 1.0 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 128354 4301 VPQQDLWHL True NCI_RA007_Epitope_Rep3 1134.5821932425 1134.58054490379 23.652 3 -1.3787657750057791 0.401147762574403 1.0 ['ENST00000419007.5_1_3:50311657-50311978:+|nuORF'] 54302 25201 KYAKERAKRRR True PC9_epitope_Rep2 1460.8800470100398 1460.87839490379 102.6 3 -1.378821794516199 0.401147762574403 1.0 ['TTC12|p.D91Y|1|0.13|ENSG00000149292|chr11:113324631-113324631|G/T|missense_variant'] 39377 7126 HKGTEKNPEI True NCI_RA007_Epitope_Rep4 1151.59348620219 1151.5923899358602 34.029 2 -1.378836948307341 0.401147762574403 1.0 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.D1423Gfs*6|1|0.12|ENSG00000181555|chr3:47120368-47120369|-/C|frameshift_variant'] 38017 4260 HANEELDE True PC9_epitope_Rep3 955.38830403287 955.38720993586 21.5 2 -1.378868521658652 0.401147762574403 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 65429 15701 LRGGGKRNKR True NCI_RA007_Epitope_Rep3 1140.69520636248 1140.69355490379 69.398 3 -1.3788889108528677 0.401147762574403 1.0 ['ENST00000475854.1_1_X:100914419-100914797:-|nuORF'] 21030 5581 EQSSWFWRWL True H1975_Epitope_Rep1 1423.6673198487897 1423.6662299358602 26.533 2 -1.378926281918993 0.40116672002276527 1.0 ['ENST00000339526.8_1_1:182360314-182360662:-|nuORF'] 110347 5152 TETVPVMRNSK True H1975_Epitope_Rep2 1260.6496211793199 1260.64798490379 24.894 3 -1.3789698531323895 0.40117382025136356 1.0 ['ENSG00000133193|ENST00000405159|FAM104A'] 44792 15343 IMLTIKPGEHG True PC9_epitope_Rep6 1194.6430792468998 1194.64144490379 71.147 3 -1.378995431807148 0.4011927769412267 1.0 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 108153 12516 SYFSFWWWWWK True NCI_RA007_Epitope_Rep1 1707.7663056140698 1707.7652099358602 52.663 2 -1.3790613392331483 0.40119987669251383 1.0 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 70730 18058 LWRRRGALRFR True NCI_RA007_Epitope_Rep2 1485.8905521240897 1485.88944993586 74.995 2 -1.3790943610574653 0.4012045621606241 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|347|3|anti-sense'] 102440 13946 SLTRWPDGRNF True PC9_epitope_Rep5 1347.6683824779495 1347.66728993586 58.665 2 -1.379109787116943 0.4012045621606241 1.0 ['ENSG00000100341|ENST00000216177|PNPLA5'] 126810 10611 VLPSGRPR True NCI_RA007_Epitope_Rep4 880.52428444356 880.52318993586 47.658 2 -1.3791732753317563 0.4012045621606241 1.0 ['ENST00000529943.6_1_16:31724582-31724693:+|nuORF'] 34255 18228 GNRLPANRR True NCI_RA007_Epitope_Rep5 1052.59515796804 1052.59406993586 76.922 2 -1.3791865222675412 0.4012045621606241 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant', 'APOBEC3D|p.F98I|1|0.37|ENSG00000243811|chr22:39025151-39025151|T/A|missense_variant'] 61963 13063 LLDNIAKYTEW True H1975_Epitope_Rep1 1364.69761691756 1364.6965099358601 55.334 2 -1.3793064037176856 0.40125908449618836 1.0 ['ENST00000529970.5_1_11:120278459-120348246:+|nuORF', 'nc|ENSG00000196914|Q9NZN5-2|ARHGEF12', 'ENSG00000196914|ENST00000397843|ARHGEF12'] 34614 22984 GPWLPKTD True H1975_Epitope_Rep2 912.4705175352 912.46942993586 94.856 2 -1.379445888477244 0.40126844881749746 1.0 ['ENST00000578509.1_1_17:80274764-80275310:-|nuORF'] 79905 23597 PEPPYPIPEE True PC9_epitope_Rep1 1166.54955570154 1166.5484499358602 95.554 2 -1.3794852686881578 0.40126844881749746 1.0 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR'] 123037 21857 VGISSLVEKD True H1975_Epitope_Rep3 1045.56554011885 1045.56444993586 91.381 2 -1.3794931634254888 0.40126844881749746 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'nc|ENSG00000138468|Q9BQF6-4|SENP7', 'SENP7|p.H452Lfs*5|1|0.16|ENSG00000138468|chr3:101364955-101364956|-/AGTAGTTTGA|frameshift_variant'] 126371 16627 VLKDRGWR True PC9_epitope_Rep2 1028.5879473292798 1028.58684993586 69.201 2 -1.3795303335288456 0.40126844881749746 1.0 ['ENSG00000111110|ENST00000228705|PPM1H'] 86905 9489 QLSGFDQAR True PC9_epitope_Rep3 1020.4988575413598 1020.49776993586 41.448 2 -1.3795355965604141 0.40126844881749746 1.0 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-2|HBS1L'] 55171 18692 LAAPPRRLRS True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 78.718 2 -1.3795449704556824 0.40126844881749746 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 135598 13796 WLFEDTFLIT True NCI_RA007_Epitope_Rep5 1283.6437904395498 1283.64214490379 59.742 3 -1.3795483763752965 0.40126844881749746 1.0 ['FAM171B|p.V181F|1|0.08|ENSG00000144369|chr2:186743551-186743551|G/T|missense_variant'] 95436 9040 RWGWMSPSL True H1975_Epitope_Rep2 1118.5331348751 1118.53257496793 39.727 1 -1.3796149220193132 0.40126844881749746 1.0 ['ENST00000481849.5_1_6:31321800-31321935:-|nuORF'] 86829 17675 QLQELPFTP True PC9_epitope_Rep5 1071.5600608155898 1071.5589699358602 73.002 2 -1.3796551525172986 0.40127078962030416 1.0 ['ENSG00000131697|ENST00000378156|NPHP4', 'nc|ENSG00000131697|O75161-2|NPHP4'] 112012 5857 TIRVHVPTDP True NCI_RA007_Epitope_Rep1 1133.61930702721 1133.61820993586 26.835 2 -1.379684409997828 0.40127078962030416 1.0 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 32458 9051 GGAGFGAG True PC9_epitope_Rep5 592.26052476896 592.25997496793 39.759 1 -1.3797454416548776 0.40128498441185884 1.0 ['ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8'] 56573 14150 LDGTELQLDLE True PC9_epitope_Rep5 1244.61361251008 1244.61250993586 59.439 2 -1.3797522886104343 0.40128498441185884 1.0 ['ENSG00000181284|ENST00000323206|TMEM102', 'TMEM102|p.A293Lfs*25|1|0.09|ENSG00000181284|chr17:7436856-7436859|GCAG/-|frameshift_variant'] 132788 5393 VVIYIKKL True H1975_Epitope_Rep2 974.6528390016199 974.65174993586 25.78 2 -1.3799411843491427 0.40131578947368424 1.0 ['ENST00000439374.6_1_1:151023495-151023633:-|nuORF'] 104079 14259 SQDSKKVEI True PC9_epitope_Rep1 1032.5451390274397 1032.5440499358601 59.671 2 -1.3799545174140901 0.4013181290154335 1.0 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 14566 3432 DTTQKYLYRD True H1975_Epitope_Rep1 1301.62518025329 1301.62354490379 17.396 3 -1.3799755408726968 0.4013181290154335 1.0 ['ENSG00000171466|ENST00000453372|ZNF562'] 60464 9132 LGWKWIHE True PC9_epitope_Rep1 1067.55525021867 1067.55414993586 39.978 2 -1.380048948116684 0.4013204684462567 1.0 ['nc|ENSG00000092969|P61812-2|TGFB2', 'ENSG00000092969|ENST00000366930|TGFB2', 'ENST00000479322.1_1_1:218607587-218614701:+|nuORF', 'ENSG00000105329|ENST00000221930|TGFB1'] 119828 10499 VDAVKLHNEL True PC9_epitope_Rep5 1136.61897267404 1136.61733490379 45.371 3 -1.380051749587347 0.4013204684462567 1.0 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 6023 19118 APKRATVARH True H1975_Epitope_Rep2 1105.64685918773 1105.64576993586 79.355 2 -1.3801519647680769 0.401334660882346 1.0 ['ENST00000518563.5_3_8:42249167-42251383:+|nuORF'] 88344 14722 QSIADGFKEA True PC9_epitope_Rep1 1064.51383889916 1064.5132749679299 61.45 1 -1.3801576362031507 0.401334660882346 1.0 ['ENSG00000100485|ENST00000216373|SOS2', 'SOS2|p.Q742Tfs*14|1|0.03|ENSG00000100485|chr14:50150168-50150169|-/CACATCTCAAATTTGTTTCCCCTAGT|frameshift_variant', 'SOS2|p.M420Ifs*3|1|0.4|ENSG00000100485|chr14:50160023-50160024|-/A|frameshift_variant'] 138784 17601 YITTSHSRL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 72.71 2 -1.3802208367750743 0.40135360982374624 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'nc|ENSG00000132003|Q9H7M6|ZSWIM4'] 98701 8859 SGFTEDQTRR True H1975_Epitope_Rep2 1195.55816332263 1195.55706993586 39.043 2 -1.3803378153528563 0.4013725583159492 1.0 ['ENSG00000184305|ENST00000509176|CCSER1', 'nc|ENSG00000184305|Q9C0I3-2|CCSER1'] 84745 16325 QDSVRHRILYL True H1975_Epitope_Rep1 1398.77318189966 1398.77208993586 68.152 2 -1.380367538102298 0.4013796536642606 1.0 ['ENSG00000278057|ENST00000617225|TEX28'] 71618 7530 MDLYFFLLAGI True NCI_RA007_Epitope_Rep2 1301.67298239285 1301.67188993586 33.916 2 -1.380379355258832 0.401386748844376 1.0 ['ENSG00000110446|ENST00000227880|SLC15A3', 'ENST00000536784.5_2_11:60704693-60705015:-|nuORF'] 88361 5708 QSKNKYLHSPE True NCI_RA007_Epitope_Rep2 1329.66771377161 1329.6666099358602 26.819 2 -1.3805408524543512 0.40139384385630134 1.0 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'KAT6B|p.R1135Sfs*2|1|0.06|ENSG00000156650|chr10:75024982-75024983|-/G|frameshift_variant', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF'] 29978 26665 FWPANHNPF True PC9_epitope_Rep1 1128.5141136826799 1128.51247490379 108.37 3 -1.3805765569460526 0.4014009387000427 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 124566 22737 VGVRRRGNVRT True PC9_epitope_Rep2 1268.7537838677597 1268.7526899358602 92.954 2 -1.3806216199889476 0.40140803337560593 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 110261 7657 TERLLTPNP True H1975_Epitope_Rep3 1039.56620882519 1039.5651099358602 34.434 2 -1.3806303403683995 0.40141512788299716 1.0 ['ENST00000596390.1_1_19:7587636-7590109:+|nuORF', 'ENST00000394321.9_1_19:7587636-7592563:+|nuORF', 'ENSG00000090674|ENST00000264079|MCOLN1'] 14300 13954 DSVNKALYWVN True NCI_RA007_Epitope_Rep1 1307.65100107831 1307.64990993586 58.301 2 -1.380709296643352 0.4014339890969424 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000032840'] 99451 18642 SIAPYRDTI True PC9_epitope_Rep2 1034.53965972418 1034.53856993586 77.072 2 -1.3807200195753424 0.4014339890969424 1.0 ['ENST00000373243.6_1_1:36023512-36023710:+|nuORF'] 124638 19711 VGWQLKNLVKK True NCI_RA007_Epitope_Rep5 1311.8026911227896 1311.80217496793 82.729 1 -1.3807310557675159 0.4014339890969424 1.0 ['ENSG00000153721|ENST00000607772|CNKSR3', 'nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF'] 69926 14539 LVKEGNEAPV True PC9_epitope_Rep2 1054.56587447202 1054.56476993586 61.195 2 -1.3807330110950717 0.4014339890969424 1.0 ['nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 92900 15572 RPFWMQRMMRS True PC9_epitope_Rep1 1524.7264491147198 1524.72534993586 64.721 2 -1.3807330609519413 0.4014339890969424 1.0 ['ENST00000399325.2_1_X:133406709-133407198:+|nuORF'] 84578 23057 QCEECQCWQH True H1975_Epitope_Rep3 1292.4372625379199 1292.43616993586 96.296 2 -1.380747143960207 0.4014339890969424 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 25310 16869 FDREKWRK True H1975_Epitope_Rep1 1163.6199757335498 1163.6188699358602 70.298 2 -1.3808304534479539 0.4014362401791745 1.0 ['nc|ENSG00000162843|B1ANS9-2|WDR64', 'nc|ENSG00000162843|B1ANS9|WDR64', 'ENSG00000162843|ENST00000437684|WDR64'] 121654 11175 VFIGFSNEF True NCI_RA007_Epitope_Rep2 1058.5072969667401 1058.5061899358602 48.049 2 -1.3809391461992113 0.4014362401791745 1.0 ['nc|ENSG00000145990|Q9NXC2-3|GFOD1'] 120086 7241 VDVLKATA True PC9_epitope_Rep3 815.47526856247 815.47416993586 32.862 2 -1.380943478234339 0.4014362401791745 1.0 ['ENSG00000120158|ENST00000381750|RCL1'] 87607 18234 QQPLKYPLLIW True NCI_RA007_Epitope_Rep4 1397.8071077968898 1397.80546490379 78.888 3 -1.3809921681718906 0.4014362401791745 1.0 ['ENST00000461745.5_2_3:77089697-77089820:+|nuORF'] 108020 9770 SWTTLRVRMW True H1975_Epitope_Rep1 1334.6917607748198 1334.6906699358601 42.511 2 -1.3810159213218791 0.4014362401791745 1.0 ['CACNA2D2|p.I159Mfs*29|1|0.16|ENSG00000007402|chr3:50387601-50387601|G/-|frameshift_variant'] 58970 7332 LEVAGPGREP True H1975_Epitope_Rep2 1023.5349086969098 1023.53380993586 33.143 2 -1.3810433788805152 0.4014362401791745 1.0 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 119880 5399 VDGKQVKAEMP True NCI_RA007_Epitope_Rep2 1200.6172584218798 1200.6156149037902 25.619 3 -1.3810780572571768 0.4014362401791745 1.0 ['ENST00000478447.1_1_1:113246211-113247744:-|nuORF'] 94118 18168 RRLREFAK True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.6399499358602 78.621 2 -1.3812239185872148 0.40147403843875157 1.0 ['nc|ENSG00000135205|Q8IYE0-2|CCDC146', 'ENSG00000135205|ENST00000285871|CCDC146'] 119921 6792 VDLIFLNTEV True NCI_RA007_Epitope_Rep4 1161.62814037541 1161.62650490379 32.748 3 -1.3813589381149607 0.40147403843875157 1.0 ['ENSG00000124160|ENST00000290231|NCOA5'] 301 18149 AAHGPDSF True NCI_RA007_Epitope_Rep4 800.34531702208 800.34420993586 78.542 2 -1.3814037402886188 0.40147403843875157 1.0 ['ENSG00000143156|ENST00000367811|NME7', 'nc|ENSG00000143156|Q9Y5B8-2|NME7', 'ENST00000524967.5_1_1:169256457-169336948:-|nuORF'] 122447 6291 VGDYWRNF True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 29.231 2 -1.3814189988617394 0.40147403843875157 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant'] 103475 10201 SPQEVLSPA True PC9_epitope_Rep3 926.4709114580198 926.46980993586 44.189 2 -1.381444029428837 0.40147403843875157 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 87958 25336 QRLRKLHAVV True PC9_epitope_Rep3 1218.76730867358 1218.7662099358602 102.87 2 -1.3815028024055764 0.40147403843875157 1.0 ['SNX1|p.R431Pfs*28|1|0.48|ENSG00000028528|chr15:64134732-64134738|GCGGGAG/-|frameshift_variant', 'ENST00000560260.5_1_15:64422114-64427054:+|nuORF', 'nc|ENSG00000028528|Q13596-2|SNX1', 'ENSG00000028528|ENST00000559844|SNX1', 'nc|ENSG00000028528|Q13596-3|SNX1'] 139656 11177 YMQWYNDELL True NCI_RA007_Epitope_Rep5 1373.5961886241298 1373.5945349037902 49.627 3 -1.3815314032286434 0.40147403843875157 1.0 ['nc|ENSG00000116406|Q9BZQ6-2|EDEM3', 'ENSG00000116406|ENST00000318130|EDEM3', 'ENST00000474725.5_1_1:184690416-184706818:-|nuORF', 'EDEM3|p.D308Rfs*2|1|0.64|ENSG00000116406|chr1:184721319-184721320|-/C|frameshift_variant'] 70526 11572 LVWRMQWQFWP True NCI_RA007_Epitope_Rep2 1575.7809101323899 1575.7798099358602 49.602 2 -1.3817157197435412 0.40150482848509983 1.0 ['ENST00000464839.5_1_1:89615102-89615213:-|nuORF'] 16700 9536 EERRTKSWGE True H1975_Epitope_Rep1 1276.6160125519198 1276.6149099358602 41.603 2 -1.381831275102635 0.401537860028672 1.0 ['nc|ENSG00000143772|P27987-2|ITPKB', 'ITPKB|p.V836Sfs*16|1|0.34|ENSG00000143772|chr1:226639604-226639604|C/-|frameshift_variant', 'ENSG00000143772|ENST00000429204|ITPKB'] 15434 7521 EALESGVF True PC9_epitope_Rep2 850.4072485722999 850.40614993586 34.297 2 -1.3819012499492733 0.401537860028672 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF', 'ENST00000545015.1_1_12:133249164-133249818:-|nuORF'] 89487 28674 QYHENIAAVVF True PC9_epitope_Rep3 1289.64043639461 1289.63878490379 119.97 3 -1.381965385290226 0.401537860028672 1.0 ['MAL|p.H121Q|1|0.06|ENSG00000172005|chr2:95049682-95049682|C/A|missense_variant'] 88502 16137 QSVKHALR True NCI_RA007_Epitope_Rep3 937.5457481641298 937.54464993586 71.174 2 -1.381990939596103 0.401537860028672 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 44968 17030 IPAGWLEWPSS True PC9_epitope_Rep4 1241.60807363717 1241.60641490379 73.498 3 -1.38199598753443 0.401537860028672 1.0 ['ENST00000397042.7_1_20:37101494-37101641:+|nuORF'] 63051 9214 LLQELAVG True PC9_epitope_Rep4 841.4909186266099 841.48982993586 43.04 2 -1.3819970611593024 0.401537860028672 1.0 ['ENST00000609803.2_1_12:46120731-46120878:-|nuORF'] 100484 12622 SLAQHQRSH True PC9_epitope_Rep2 1062.53188900514 1062.5307899358602 53.86 2 -1.3820529483807267 0.401537860028672 1.0 ['ENSG00000198440|ENST00000333201|ZNF583'] 944 15367 ADRHRPRLLRR True NCI_RA007_Epitope_Rep5 1444.8599802717997 1444.8588899358601 65.816 2 -1.3821704002490032 0.401537860028672 1.0 ['ENST00000597275.5_1_X:48911128-48919505:+|nuORF'] 128706 23208 VPWLWLISKYR True PC9_epitope_Rep5 1459.83399125107 1459.83288993586 94.25 2 -1.3823192017241768 0.40156379575879636 1.0 ['ENST00000234256.3_1_2:65249225-65249402:+|nuORF'] 16071 13540 EEAAPEGP True NCI_RA007_Epitope_Rep1 798.3395629352999 798.3390149679301 56.675 1 -1.382320362690912 0.40156379575879636 1.0 ['ENSG00000284395|ENST00000640283|PERCC1'] 117395 12035 TVPMYRLIP True PC9_epitope_Rep2 1088.6052371862 1088.60412993586 51.609 2 -1.382367669247972 0.40156379575879636 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2'] 123207 19039 VGLEKPSLEP True H1975_Epitope_Rep3 1067.58627556343 1067.5851699358602 79.839 2 -1.3824313988410717 0.40156379575879636 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 98672 7155 SGDLDLIGVAR True NCI_RA007_Epitope_Rep2 1114.59823722946 1114.5971499358602 32.453 2 -1.382434956685893 0.40156379575879636 1.0 ['CLIP1-KNTC1|1|fusion', 'ENSG00000184445|ENST00000333479|KNTC1'] 37733 24538 GWGHPPGAP True H1975_Epitope_Rep1 874.4085859849798 874.40748993586 101.69 2 -1.382441737415119 0.40156379575879636 1.0 ['ENST00000425202.5_1_19:51162395-51162548:+|nuORF'] 94928 6138 RTFWYWNYNYY True H1975_Epitope_Rep1 1674.7255630008997 1674.72391490379 28.68 3 -1.3824720441717075 0.40156379575879636 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 68922 9680 LTPAQPPVRPA True PC9_epitope_Rep5 1145.65569253593 1145.65458993586 42.202 2 -1.3825188206221208 0.40157088531115614 1.0 ['ENST00000486149.2_1_6:30954274-30955276:+|nuORF'] 57547 17843 LEDRIDYL True PC9_epitope_Rep3 1035.52367530687 1035.52256993586 73.829 2 -1.3827121058360974 0.40164429649461575 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 88309 12878 QSFNNFMLRI True PC9_epitope_Rep6 1268.6335771923598 1268.63194490379 61.057 3 -1.3827655731927173 0.40164429649461575 1.0 ['ENSG00000138031|ENST00000679454|ADCY3', 'nc|ENSG00000138031|O60266-2|ADCY3', 'ENST00000485887.1_1_2:25043436-25046221:-|nuORF'] 126189 12378 VLGAAGAA True NCI_RA007_Epitope_Rep2 628.3544251538 628.3538749679301 52.753 1 -1.382818795571214 0.40165371493555724 1.0 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2'] 135842 4206 WPCPDRHLREK True NCI_RA007_Epitope_Rep1 1435.7142871245499 1435.71265490379 20.461 3 -1.3828220354435667 0.40165371493555724 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 110412 18003 TEWGWVGV True NCI_RA007_Epitope_Rep5 932.4392174069199 932.43812993586 76.043 2 -1.3828393190016541 0.40165371493555724 1.0 ['ENST00000409638.7_1_2:220113277-220113556:+|nuORF'] 117497 10490 TVRHSCLPLL True PC9_epitope_Rep2 1137.63284891637 1137.6312149037901 45.673 3 -1.382861447441745 0.4016608029188434 1.0 ['ENST00000491165.5_2_3:113415279-113415423:-|nuORF'] 64991 18095 LQHHIIHT True PC9_epitope_Rep6 997.54574816413 997.54519496793 82.238 1 -1.3829346445546458 0.40170342817882443 1.0 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 85074 8131 QEIVTNPPDI True NCI_RA007_Epitope_Rep1 1124.57135377528 1124.5702499358601 35.626 2 -1.3829904079860942 0.40171051540529973 1.0 ['ENSG00000168310|ENST00000393593|IRF2', 'nc|ENSG00000168310|P14316-2|IRF2'] 61443 12632 LIWKVPVSRQ True H1975_Epitope_Rep1 1224.7342772097998 1224.73318993586 53.64 2 -1.3830953663909544 0.4017176024638711 1.0 ['ENSG00000133800|ENST00000256178|LYVE1'] 64869 7076 LQDSWLM[Oxidation]QAVL True NCI_RA007_Epitope_Rep2 1318.6591236143001 1318.6580299358602 32.148 2 -1.3831203944656372 0.4017388626322211 1.0 ['ENST00000481262.6_1_15:40705272-40727929:+|nuORF'] 81012 14964 PILKGVGF True PC9_epitope_Rep4 829.5061747679299 829.50506993586 65.497 2 -1.383169561705952 0.4017388626322211 1.0 ['ENSG00000142319|ENST00000270349|SLC6A3'] 19514 23637 ELPKRRRQRG True PC9_epitope_Rep1 1294.7694339318998 1294.76832993586 95.714 2 -1.3832038489674168 0.4017388626322211 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 66266 10685 LSFFGMREH True PC9_epitope_Rep5 1122.5280494946599 1122.52694993586 46.091 2 -1.3833484835777043 0.40176963896522316 1.0 ['ENST00000316660.6_1_18:57570124-57570343:+|nuORF'] 139507 15430 YLSIPAVFFL True PC9_epitope_Rep3 1168.6532329244399 1168.65212993586 64.506 2 -1.383463866666782 0.40180263407238964 1.0 ['nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 72430 4922 MKMLRDELDLR True NCI_RA007_Epitope_Rep2 1418.7373906378998 1418.73574490379 23.765 3 -1.383535363732841 0.40180263407238964 1.0 ['nc|ENSG00000141013|O95995-2|GAS8', 'ENSG00000141013|ENST00000268699|GAS8', 'ENST00000540721.5_1_16:90089090-90108732:+|nuORF', 'ENST00000565062.5_1_16:90097706-90103159:+|nuORF'] 80224 2781 PGAGVHPK True NCI_RA007_Epitope_Rep1 761.4184223926899 761.41732993586 14.708 2 -1.3835642219875668 0.40180263407238964 1.0 ['ENSG00000168939|ENST00000695325|SPRY3'] 3409 18677 AGIMLLLRSI True PC9_epitope_Rep5 1085.66308641549 1085.6619899358602 76.861 2 -1.3835815371999869 0.40180263407238964 1.0 ['nc|nan|Q6P1S2-2|C3orf33', 'ENSG00000174928|ENST00000340171|C3orf33'] 118870 8766 VAAVVRWI True H1975_Epitope_Rep2 912.5545219426799 912.55342993586 38.683 2 -1.3835912995264663 0.40180263407238964 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1', 'ENSG00000140326|ENST00000356231|CDAN1'] 34244 6579 GNQLIPQPL True NCI_RA007_Epitope_Rep2 978.5498304850598 978.54872993586 30.202 2 -1.3835917651100187 0.40180263407238964 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 132607 25186 VVFILQKA True PC9_epitope_Rep2 916.57458868092 916.57348993586 102.54 2 -1.3835946041825904 0.40180263407238964 1.0 ['ENST00000507310.1_2_5:102482311-102483895:+|nuORF', 'ENST00000321521.13_1_5:102482350-102484949:+|nuORF'] 121719 9636 VFLGVDTG True PC9_epitope_Rep1 806.41741933318 806.41632993586 41.921 2 -1.3836040699045598 0.40180263407238964 1.0 ['ENST00000492733.1_1_10:99215760-99215802:+|nuORF', 'ENST00000487315.1_1_10:99213348-99216645:+|nuORF', 'ENST00000495735.5_1_10:99212613-99216645:+|nuORF', 'ENST00000459777.5_1_10:99206080-99216645:+|nuORF', 'ENST00000466895.5_1_10:99206080-99216645:+|nuORF', 'nc|ENSG00000171307|Q969W1-4|ZDHHC16', 'nc|ENSG00000171307|Q969W1-3|ZDHHC16', 'nc|ENSG00000171307|Q969W1-2|ZDHHC16', 'ENSG00000171307|ENST00000393760|ZDHHC16'] 61480 25705 LKALWALA True NCI_RA007_Epitope_Rep5 884.5483739330799 884.5478249679301 106.42 1 -1.3836240187764899 0.4018097189487523 1.0 ['nc|ENSG00000219438|Q7Z5A7-2|TAFA5'] 79821 16420 PEFRYTAGI True PC9_epitope_Rep2 1052.52909504048 1052.5279899358602 68.404 2 -1.3837049598813127 0.401840490797546 1.0 ['nc|ENSG00000106624|Q8IUX7-2|AEBP1', 'ENSG00000106624|ENST00000223357|AEBP1'] 121713 11536 VFLFCFVLF True PC9_epitope_Rep6 1133.5983609006098 1133.5967249037901 55.461 3 -1.3838534031619714 0.40190679220702313 1.0 ['ENST00000520201.5_1_8:42177053-42177326:+|nuORF'] 47327 9024 IVERHLID True NCI_RA007_Epitope_Rep2 993.5607295219299 993.55962993586 39.702 2 -1.3838732105264682 0.4019138755980861 1.0 ['ENSG00000148606|ENST00000372371|POLR3A', 'POLR3A|p.R614Gfs*21|1|0.7|ENSG00000148606|chr10:78009605-78009606|CT/-|frameshift_variant', 'ENST00000484760.1_1_10:79773365-79779077:-|nuORF'] 63669 21963 LMRTRRVCL True PC9_epitope_Rep2 1146.64778778786 1146.6466899358602 89.958 2 -1.3840010157442744 0.4019517278950236 1.0 ['ENST00000423462.6_1_10:16553279-16553402:+|nuORF'] 125757 20936 VKTKGGSK True H1975_Epitope_Rep2 803.4865019525099 803.48540993586 86.676 2 -1.3840048407654675 0.4019517278950236 1.0 ['nc|ENSG00000100365|Q15080-3|NCF4', 'ENSG00000100365|ENST00000248899|NCF4', 'NCF4|p.L54I|1|0.91|ENSG00000100365|chr22:36864961-36864961|C/A|missense_variant'] 89131 15927 QVQVQDEEITE True PC9_epitope_Rep1 1316.6095897587995 1316.60848993586 66.073 2 -1.3840400806857298 0.4019540502131691 1.0 ['nc|ENSG00000079950|O15400-2|STX7', 'ENSG00000079950|ENST00000367941|STX7'] 7306 15148 ARKAHVAT True NCI_RA007_Epitope_Rep5 852.49298431528 852.49188993586 64.947 2 -1.3840489984930657 0.4019540502131691 1.0 ['ENSG00000178163|ENST00000326756|ZNF518B', 'ZNF518B|p.R1005Gfs*3|1|0.19|ENSG00000178163|chr4:10443316-10443316|T/-|frameshift_variant', 'ZNF518B|p.V760L|1|0.08|ENSG00000178163|chr4:10444051-10444051|C/G|missense_variant'] 126901 11297 VLQQHVLEFY True NCI_RA007_Epitope_Rep1 1274.6659228664598 1274.66482993586 47.921 2 -1.3841316409528297 0.4019939848911834 1.0 ['ENSG00000205339|ENST00000379719|IPO7'] 58416 10909 LENVLNRASN True NCI_RA007_Epitope_Rep1 1128.58873517492 1128.5876299358601 46.425 2 -1.384193690525277 0.4019939848911834 1.0 ['ENSG00000112685|ENST00000230449|EXOC2'] 100703 14055 SLDRAASPVL True PC9_epitope_Rep5 1027.5662088251897 1027.5651099358602 59.076 2 -1.3842482707250636 0.4019939848911834 1.0 ['ENSG00000111145|ENST00000228741|ELK3', 'ENST00000549529.1_1_12:96649292-96660955:+|nuORF'] 35432 11662 GSGCGRQA True H1975_Epitope_Rep1 734.3129713479799 734.31242496793 49.847 1 -1.3842665177623796 0.4019939848911834 1.0 ['ENST00000429490.5_1_10:52383609-52383699:-|nuORF'] 120136 12914 VEAHFKHK True PC9_epitope_Rep1 994.5348491272599 994.53374993586 54.547 2 -1.3843051806334083 0.4019939848911834 1.0 ['nc|ENSG00000105963|O75689-3|ADAP1', 'ENSG00000105963|ENST00000265846|ADAP1', 'nc|ENSG00000105963|O75689-2|ADAP1', 'ENST00000478000.5_1_7:938560-944975:-|nuORF'] 35473 14361 GSKHGRKA True NCI_RA007_Epitope_Rep5 839.47258322387 839.47148993586 61.924 2 -1.3843280558244013 0.4019939848911834 1.0 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 55440 21037 LAFHPHGA True PC9_epitope_Rep4 848.42932142956 848.42822993586 89.079 2 -1.384329044780775 0.4019939848911834 1.0 ['ENST00000368457.2_1_1:154930914-154931193:-|nuORF'] 18491 2689 EKERSRMRKEW True NCI_RA007_Epitope_Rep2 1533.7834293135297 1533.78121987172 14.685 4 -1.384332940931762 0.4019939848911834 1.0 ['ENST00000401878.7_2_7:155570161-155570317:+|nuORF'] 87513 8323 QQHLQHLEL True PC9_epitope_Rep4 1144.5989059358 1144.5978099358601 39.473 2 -1.38434270592098 0.4019939848911834 1.0 ['ENSG00000198400|ENST00000524377|NTRK1', 'nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'PRCC-NTRK1|1|fusion', 'ENST00000530298.5_1_1:156807654-156845592:+|nuORF', 'ENST00000533630.1_1_1:156830726-156834592:+|nuORF'] 91262 7842 RGGRGGMG True H1975_Epitope_Rep3 746.3605902467399 746.3600449679301 35.141 1 -1.3844420670266855 0.4019939848911834 1.0 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS'] 58656 11122 LERGFSVKYS True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 47.77 2 -1.3845358105701513 0.4019939848911834 1.0 ['nc|ENSG00000139292|O75473-3|LGR5', 'nc|ENSG00000139292|O75473-2|LGR5', 'ENSG00000139292|ENST00000266674|LGR5'] 45164 18173 IPPMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 74.833 2 -1.3845538560753827 0.4019939848911834 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 85487 18428 QFPHPFLPNID True PC9_epitope_Rep6 1323.6611718391898 1323.66006993586 83.527 2 -1.3845600187790286 0.4019939848911834 1.0 ['ENSG00000135226|ENST00000335568|UGT2B28', 'nc|ENSG00000135226|Q9BY64-2|UGT2B28'] 83646 8406 PVDYEEFVR True H1975_Epitope_Rep1 1152.54513902744 1152.5440499358601 37.262 2 -1.3845601686519107 0.4019939848911834 1.0 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 40348 20984 HQRFESRMS True NCI_RA007_Epitope_Rep4 1176.54582481712 1176.54418490379 90.937 3 -1.3845846214928677 0.40199862653626656 1.0 ['MYO1B|p.H488R|1|0.18|ENSG00000128641|chr2:191385993-191385993|A/G|missense_variant'] 109341 8094 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep1 1286.5311461188496 1286.5305749679299 36.079 1 -1.3846547291904638 0.40199862653626656 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 86659 22574 QLHGKSDS True H1975_Epitope_Rep2 870.4195445915 870.4184499358599 93.269 2 -1.3846666233485059 0.40199862653626656 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 36547 9120 GVGVGNHG True H1975_Epitope_Rep1 695.33508669155 695.33453496793 39.984 1 -1.3846767161189388 0.40199862653626656 1.0 ['BCL9L|p.A77V|1|0.23|ENSG00000186174|chr11:118908452-118908452|G/A|missense_variant'] 116099 23365 TSRKLGNGTVD True PC9_epitope_Rep5 1146.5992998586198 1146.59764490379 94.858 3 -1.384718208666617 0.40200071031135315 1.0 ['ENST00000316491.13_1_16:31724569-31734591:+|nuORF'] 18256 9567 EIQEVRSK True H1975_Epitope_Rep1 987.53490869691 987.53380993586 41.722 2 -1.384729715893607 0.40200071031135315 1.0 ['nc|ENSG00000131828|P08559-3|PDHA1', 'ENSG00000131828|ENST00000422285|PDHA1', 'nc|ENSG00000131828|P08559-2|PDHA1', 'nc|ENSG00000131828|P08559-4|PDHA1', 'PDHA2|p.A351Lfs*12|1|0.09|ENSG00000163114|chr4:95841201-95841201|G/-|frameshift_variant', 'ENSG00000163114|ENST00000295266|PDHA2'] 91020 5044 RFFPYNYHRQK True NCI_RA007_Epitope_Rep1 1554.7844152896998 1554.78277490379 23.704 3 -1.3847657840023577 0.40200071031135315 1.0 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 58483 11015 LEQCRQLYWRR True H1975_Epitope_Rep3 1549.7936000744098 1549.7925099358602 47.459 2 -1.3848440466587584 0.40200071031135315 1.0 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 128026 19999 VPKDPKPQWRR True PC9_epitope_Rep5 1405.79425169741 1405.79260490379 81.98 3 -1.3848802124116 0.40200071031135315 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 18643 7848 EKVWNHRWRE True NCI_RA007_Epitope_Rep1 1438.7218150331398 1438.7207099358602 34.517 2 -1.3848886252019361 0.40200071031135315 1.0 ['ENST00000564353.5_1_15:74890891-74891065:+|nuORF'] 127707 10118 VPALTLAP True PC9_epitope_Rep5 780.47454028648 780.47344993586 43.903 2 -1.3849350540705234 0.40200071031135315 1.0 ['nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 56036 6191 LASRCRDAR True NCI_RA007_Epitope_Rep1 1046.5403455138598 1046.5392499358602 28.118 2 -1.3849650108802585 0.40200071031135315 1.0 ['nc|ENSG00000135502|Q8NG04|SLC26A10P'] 30420 15443 GAERDGKN True H1975_Epitope_Rep3 845.3991435000898 845.3985949679301 64.815 1 -1.3849796285020142 0.40200071031135315 1.0 ['ENSG00000184432|ENST00000333188|COPB2', 'nc|ENSG00000184432|P35606-2|COPB2'] 100457 16419 SLAHPAPII True PC9_epitope_Rep1 917.5334521449299 917.53234993586 67.98 2 -1.3850242953842449 0.40200071031135315 1.0 ['nc|ENSG00000047849|P27816-3|MAP4'] 32780 14289 GHFCLCPL True NCI_RA007_Epitope_Rep4 888.39861554824 888.39750993586 62.263 2 -1.3850312017189268 0.40200071031135315 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 26475 12266 FIDVSKIK True NCI_RA007_Epitope_Rep1 948.56441792004 948.56332993586 51.683 2 -1.385036234970239 0.40200071031135315 1.0 ['ENSG00000135605|ENST00000381501|TEC'] 37092 11816 GVPRKPGM True NCI_RA007_Epitope_Rep3 840.4639926861198 840.46288993586 53.597 2 -1.3851605247054548 0.4020196280380249 1.0 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000461665.5_1_7:75677478-75687456:+|nuORF'] 17737 5269 EHRGPVQVT True PC9_epitope_Rep2 1021.53049202281 1021.52938993586 25.654 2 -1.385239329067398 0.40202402793395275 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF', 'SPINT2-MAP4K1|3|fusion', 'SPINT2-MAP4K1|4|fusion', 'SPINT2-MAP4K1|1|fusion', 'SPINT2-MAP4K1|2|fusion'] 101105 7061 SLGLALQGI True H1975_Epitope_Rep2 870.51746772762 870.51636993586 32.088 2 -1.3852632905715234 0.40202402793395275 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|354|2|anti-sense'] 68747 12042 LTLDTWEP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 51.33 1 -1.3853021787706143 0.40202402793395275 1.0 ['ENSG00000114331|ENST00000326793|ACAP2', 'ACAP2|p.S453C|1|0.43|ENSG00000114331|chr3:195301612-195301612|G/C|missense_variant', 'ENST00000475905.5_1_3:195016371-195022834:-|nuORF'] 131789 19277 VTQDFMMYRTG True PC9_epitope_Rep2 1347.5951430783098 1347.59404993586 79.522 2 -1.3853140863566593 0.40202402793395275 1.0 ['ENST00000527715.5_1_15:79214474-79217794:-|nuORF', 'ENST00000533777.5_1_15:79214474-79223953:-|nuORF', 'ENST00000534237.5_1_15:79214474-79224366:-|nuORF', 'ENSG00000103811|ENST00000220166|CTSH'] 8530 7749 ATTAQHGKRH True PC9_epitope_Rep5 1105.5740881702898 1105.57298993586 34.748 2 -1.3854013601921955 0.40202402793395275 1.0 ['ENST00000302079.10_2_18:10871411-10979568:-|nuORF'] 139405 11720 YLPDLMYLDYR True H1975_Epitope_Rep1 1460.70098804584 1460.69988993586 50.073 2 -1.3854026732504043 0.40202402793395275 1.0 ['nc|ENSG00000171962|Q9H069-2|DRC3', 'ENSG00000171962|ENST00000399187|DRC3'] 71167 15948 LYMLYTMK True PC9_epitope_Rep3 1061.52896101145 1061.52786993586 66.489 2 -1.3854060769810588 0.40202402793395275 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 54086 22382 KVLDQKEHRL True PC9_epitope_Rep3 1264.72516907808 1264.7240699358601 91.37 2 -1.3854091402309292 0.40202402793395275 1.0 ['nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB'] 129792 23638 VRRKSRLRDPG True PC9_epitope_Rep1 1338.7956486797398 1338.79399490379 95.715 3 -1.3854133640455137 0.40202402793395275 1.0 ['ENST00000515682.5_1_4:8207046-8242679:+|nuORF', 'ENSG00000125089|ENST00000245105|SH3TC1', 'ENST00000512100.5_1_4:8211452-8220050:+|nuORF', 'ENST00000506360.5_1_4:8207046-8220006:+|nuORF', 'SH3TC1|p.L950Cfs*194|1|0.18|ENSG00000125089|chr4:8228541-8228541|C/-|frameshift_variant'] 78729 8512 PAAAPLEEL True PC9_epitope_Rep5 909.48074786573 909.47964993586 37.683 2 -1.3854567441490058 0.40202402793395275 1.0 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1'] 22587 9807 ETLEALILK True H1975_Epitope_Rep3 1028.6117620352798 1028.6106699358602 42.749 2 -1.385467262912242 0.40202402793395275 1.0 ['ENSG00000148606|ENST00000372371|POLR3A'] 84860 13259 QEAPEFWHFHE True H1975_Epitope_Rep2 1455.62076357919 1455.6196699358602 56.13 2 -1.3854705024250138 0.40202402793395275 1.0 ['SLC39A12|p.G436W|1|0.41|ENSG00000148482|chr10:17991187-17991187|G/T|missense_variant'] 81301 22980 PLAFWRKQL True PC9_epitope_Rep3 1157.6709486772497 1157.6698499358602 93.659 2 -1.3854830967247251 0.40202402793395275 1.0 ['ENSG00000137875|ENST00000260442|BCL2L10'] 20522 23065 EPPKILVYSL True PC9_epitope_Rep2 1157.66961126457 1157.66797490379 94.211 3 -1.3855343984988664 0.40202402793395275 1.0 ['FAM47C|p.S532Y|1|0.84|ENSG00000198173|chrX:37010005-37010005|C/A|missense_variant'] 44818 14215 INALRRCFFWR True H1975_Epitope_Rep1 1480.7873924951598 1480.7862899358602 59.856 2 -1.3856249170592727 0.4020429420258978 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR', 'nc|ENSG00000001626|P13569-3|CFTR'] 10345 8503 CFTCVMCH True NCI_RA007_Epitope_Rep4 942.32202210366 942.32092993586 39.507 2 -1.3856646782602018 0.40204526086544834 1.0 ['ENSG00000145012|ENST00000617246|LPP'] 15811 16222 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 69.143 2 -1.3856668042731382 0.40204526086544834 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 89803 26213 RALLKRRRPR True H1975_Epitope_Rep2 1320.86908840352 1320.8674349037901 107.77 3 -1.3857297939017712 0.4020712510356255 1.0 ['nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 56272 17903 LDAASGRLYL True PC9_epitope_Rep5 1077.5818588893299 1077.5807699358602 73.881 2 -1.3857334313042766 0.4020712510356255 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 65695 6299 LSASITKQPI True NCI_RA007_Epitope_Rep3 1056.6179100448799 1056.6168099358601 31.779 2 -1.3857618442776276 0.4020783278692405 1.0 ['nc|ENSG00000169762|Q6NXT6-2|TAPT1', 'ENSG00000169762|ENST00000405303|TAPT1'] 59485 3476 LFQTPGTD True PC9_epitope_Rep5 877.4181476091699 877.41704993586 18.447 2 -1.385801083958369 0.4020806457339661 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 82250 20750 PPFALSSS True PC9_epitope_Rep4 804.4017692690401 804.40066993586 87.971 2 -1.3858053711487373 0.4020806457339661 1.0 ['ENST00000553497.1_1_14:70082246-70082456:+|nuORF'] 69120 10105 LTRKEWIQFM True H1975_Epitope_Rep2 1350.71182751306 1350.7101749037902 43.863 3 -1.3858143413790087 0.402087722205127 1.0 ['ENSG00000172123|ENST00000304905|SLFN12'] 21361 24217 ERFTYHNV True PC9_epitope_Rep4 1064.5039429218 1064.50284993586 101.63 2 -1.3858260423788846 0.4020947985087875 1.0 ['nc|ENSG00000172830|Q8TE77-3|SSH3', 'ENSG00000172830|ENST00000308127|SSH3', 'nc|ENSG00000172830|Q8TE77-5|SSH3', 'nc|ENSG00000172830|Q8TE77-2|SSH3'] 127831 17130 VPEWQHPL True PC9_epitope_Rep3 1004.50796567308 1004.50686993586 71.045 2 -1.385933553946973 0.40211126758896554 1.0 ['ENST00000460090.5_1_5:68581275-68590699:-|nuORF', 'ENST00000396496.6_1_5:68588152-68590699:-|nuORF'] 118725 19827 TYTYECIKEAN True PC9_epitope_Rep2 1333.58601786325 1333.5843749037901 81.654 3 -1.3859746260462782 0.40211126758896554 1.0 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2', 'OSGIN2|p.K490Ifs*18|1|0.06|ENSG00000164823|chr8:89925482-89925483|-/TTAGGATG|frameshift_variant'] 15881 10677 EDIHRLKERFE True NCI_RA007_Epitope_Rep5 1470.75792575834 1470.7568299358602 47.705 2 -1.3859756933023832 0.40211126758896554 1.0 ['ENSG00000104722|ENST00000221166|NEFM'] 68596 18146 LTHLPFLNK True PC9_epitope_Rep5 1081.62841515893 1081.62730993586 74.808 2 -1.3859809849968119 0.40211126758896554 1.0 ['ENST00000337190.6_1_4:2251252-2251459:-|nuORF'] 137300 17278 YDDKIYYF True NCI_RA007_Epitope_Rep4 1125.5018772331298 1125.50137496793 74.815 1 -1.386014709029678 0.40211358445462186 1.0 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 117902 9029 TWNHTVFY True H1975_Epitope_Rep1 1066.4872302284998 1066.4861299358602 39.636 2 -1.38604443929058 0.40211358445462186 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1'] 88914 10452 QVFIFRKSI True NCI_RA007_Epitope_Rep4 1136.67061432408 1136.66950993586 47.053 2 -1.3861668744185096 0.40213481018650005 1.0 ['ENST00000409725.1_1_2:128284280-128284364:-|nuORF'] 134969 13384 WAWPRTPWRRW True NCI_RA007_Epitope_Rep2 1596.8214695047598 1596.82036993586 56.7 2 -1.3861721713924717 0.40213481018650005 1.0 ['ENST00000608648.1_1_19:18235548-18239224:+|nuORF'] 120936 13325 VEPAAGLPRPL True PC9_epitope_Rep2 1118.64479349906 1118.64368993586 56.527 2 -1.3861742799689496 0.40213481018650005 1.0 ['ENST00000491308.5_1_1:155580107-155580345:+|nuORF'] 91629 23276 RIPRPLRAHPG True PC9_epitope_Rep4 1268.7578066190397 1268.75670993586 97.783 2 -1.3861860658819654 0.4021371263578917 1.0 ['ENST00000380094.9_1_10:5931597-5931837:-|nuORF'] 114064 20877 TPEQYLTPL True PC9_epitope_Rep4 1060.54407639828 1060.5429699358601 88.459 2 -1.3862132542285588 0.4021371263578917 1.0 ['ENSG00000101298|ENST00000381867|SNPH', 'nc|ENSG00000101298|O15079|SNPH'] 60017 7624 LGKKAAGI True NCI_RA007_Epitope_Rep5 756.4857736765199 756.48466993586 36.024 2 -1.3862759276600047 0.40215834999822503 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 136056 19920 WRFHTKYMMWF True NCI_RA007_Epitope_Rep2 1631.75298113239 1631.7518899358602 82.484 2 -1.386294749902061 0.40215834999822503 1.0 ['ENSG00000088038|ENST00000221232|CNOT3'] 67499 9928 LSSYGIDK True H1975_Epitope_Rep1 881.44944773745 881.44834993586 43.124 2 -1.386313428742733 0.40215834999822503 1.0 ['ENSG00000213886|ENST00000377050|UBD'] 110703 5822 TGELEPPDP True H1975_Epitope_Rep3 953.4341915961298 953.43308993586 27.415 2 -1.3863622624001488 0.4021842018079417 1.0 ['ENSG00000129292|ENST00000395386|PHF20L1', 'EFR3A-PHF20L1|1|fusion', 'ENST00000477051.1_1_8:133854703-133858165:+|nuORF', 'PHF20L1|p.A989V|1|0.24|ENSG00000129292|chr8:132845835-132845835|C/T|missense_variant'] 124295 19246 VGTNGGLK True PC9_epitope_Rep6 744.41300265908 744.4124549679301 86.68 1 -1.3863872955379883 0.4021842018079417 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 132863 3650 VVLLRLKL True PC9_epitope_Rep2 952.6797224558 952.67862993586 19.312 2 -1.3864777412277134 0.4021842018079417 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 30432 11081 GAETSSRNDY True H1975_Epitope_Rep2 1098.45778057502 1098.4566899358601 47.655 2 -1.3865466140236322 0.4021842018079417 1.0 ['ELK4|p.K134E|1|0.08|ENSG00000158711|chr1:205620646-205620646|T/C|missense_variant'] 8678 9691 AVAKAAPAP True PC9_epitope_Rep6 794.4650382319398 794.46394993586 47.661 2 -1.3865611319022386 0.4021842018079417 1.0 ['nc|ENSG00000151893|Q86Y37-2|CACUL1', 'ENSG00000151893|ENST00000369151|CACUL1'] 84467 19535 QAIKLYLRRQR True NCI_RA007_Epitope_Rep3 1443.87865002771 1443.87700490379 85.221 3 -1.3866279696413157 0.4021842018079417 1.0 ['ENSG00000186377|ENST00000371901|CYP4X1'] 106532 5481 STLPQDKALET True NCI_RA007_Epitope_Rep2 1201.6190322436896 1201.61792993586 25.937 2 -1.3866578246425227 0.4021842018079417 1.0 ['ENSG00000177483|ENST00000316997|RBM44'] 85438 6011 QEYIQQPI True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 28.134 2 -1.386715241548068 0.40218651648169623 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF', 'ENST00000489499.5_1_1:114442984-114447339:-|nuORF'] 112224 25541 TKLKNQKNLL True NCI_RA007_Epitope_Rep1 1198.7397565130598 1198.7386499358602 105.71 2 -1.386779624768198 0.40218651648169623 1.0 ['ENSG00000118898|ENST00000345988|PPL', 'ENST00000589090.1_1_16:4938789-4940274:-|nuORF'] 127762 10952 VPCSRVGH True PC9_epitope_Rep4 853.42285615013 853.42174993586 49.897 2 -1.3869601489252064 0.40219821823645635 1.0 ['nc|ENSG00000158089|Q96FL9-2|GALNT14', 'nc|ENSG00000158089|Q96FL9-4|GALNT14', 'ENSG00000158089|ENST00000349752|GALNT14', 'ENST00000486564.5_1_2:31133891-31178528:-|nuORF', 'nc|ENSG00000158089|Q96FL9-3|GALNT14', 'nc|ENSG00000174473|Q49A17-2|GALNTL6', 'ENSG00000174473|ENST00000506823|GALNTL6', 'nc|ENSG00000100626|Q8N428-2|GALNT16', 'ENSG00000100626|ENST00000448469|GALNT16', 'ENSG00000109586|ENST00000265000|GALNT7'] 122823 14914 VGGSGSGK True NCI_RA007_Epitope_Rep5 647.3238533015101 647.3233049679301 64.034 1 -1.3870061093462265 0.40219821823645635 1.0 ['ENSG00000203782|ENST00000368742|LORICRIN', 'ABCB7|p.V655Sfs*30|1|0.1|ENSG00000131269|chrX:75060303-75060303|C/-|frameshift_variant', 'nc|ENSG00000131269|O75027-3|ABCB7', 'ENSG00000131269|ENST00000373394|ABCB7', 'nc|ENSG00000131269|O75027-2|ABCB7'] 132862 3541 VVLLRLKL True PC9_epitope_Rep2 952.6797224558 952.67862993586 18.899 2 -1.387026304176828 0.40219821823645635 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 138742 15029 YIRRQRAQP True PC9_epitope_Rep6 1186.6683229082998 1186.6672299358602 69.836 2 -1.3870302631831841 0.40219821823645635 1.0 ['XRN2|p.Y841Tfs*10|1|0.16|ENSG00000088930|chr20:21368526-21368526|T/-|frameshift_variant', 'nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 74299 15813 NELDRYHRIIE True PC9_epitope_Rep2 1456.7422756941999 1456.7411699358602 66.086 2 -1.387030530442872 0.40219821823645635 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 66279 18717 LSFIPTGQQ True PC9_epitope_Rep4 989.51819600361 989.51708993586 80.074 2 -1.3870548266841918 0.40220529080497847 1.0 ['ENST00000371281.3_1_1:55183281-55186865:+|nuORF'] 21043 11038 EQTKKVVYA True H1975_Epitope_Rep1 1064.5866099165999 1064.58550993586 47.42 2 -1.387082601886659 0.40221943543998295 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'ENST00000514858.5_1_4:2082849-2194957:-|nuORF'] 98817 20423 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 84.621 2 -1.3870978561419927 0.40221943543998295 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 117711 21651 TVVALRSQTA True PC9_epitope_Rep1 1044.5927579262 1044.5916699358602 88.109 2 -1.3871823860073083 0.4022501685851858 1.0 ['nc|ENSG00000155100|Q8N6M0-2|OTUD6B', 'ENSG00000155100|ENST00000404789|OTUD6B'] 75628 14221 NLEDLALRTPN True H1975_Epitope_Rep1 1254.6568147347398 1254.6557099358602 59.88 2 -1.3872030289517514 0.4022571066920611 1.0 ['ENST00000397473.6_1_13:99908655-99908739:-|nuORF'] 57598 4848 LEEAEGRDPQG True H1975_Epitope_Rep3 1199.5418445521498 1199.54074993586 23.773 2 -1.387304482614502 0.4022571066920611 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL'] 16368 15871 EEILDGNDEKY True PC9_epitope_Rep5 1323.58304065779 1323.5819499358602 66.039 2 -1.3873297731676484 0.4022571066920611 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1', 'ENST00000491967.1_1_22:24135798-24143581:+|nuORF'] 128831 17320 VQCLRLAF True PC9_epitope_Rep4 948.5215075622399 948.52040993586 74.629 2 -1.3873404609973456 0.4022571066920611 1.0 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 91600 15421 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 64.474 3 -1.3873660165174375 0.4022571066920611 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 63995 7656 LNVVAVGCRA True NCI_RA007_Epitope_Rep2 1000.5487849392399 1000.54768993586 34.405 2 -1.3874134757523147 0.4022571066920611 1.0 ['ENST00000511647.5_1_4:129784042-129784372:+|nuORF'] 130271 24423 VSGLGCFDGSK True H1975_Epitope_Rep1 1068.4909952796 1068.4898899358602 101.25 2 -1.38764623296606 0.402309048109112 1.0 ['ENST00000493916.1_1_1:38018188-38019866:-|nuORF'] 102065 16807 SLRARGVP True NCI_RA007_Epitope_Rep1 854.50863437942 854.50808496793 69.504 1 -1.3877191227336947 0.402309048109112 1.0 ['SLC29A4|p.G44S|1|0.2|ENSG00000164638|chr7:5287946-5287946|G/A|missense_variant'] 11525 15128 DFMHIFRTI True PC9_epitope_Rep1 1178.5906497512199 1178.58901490379 63.01 3 -1.3877204018176001 0.402309048109112 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 32055 12468 GERVAKGP True PC9_epitope_Rep1 812.4504507969598 812.44934993586 52.824 2 -1.3877476662263588 0.402309048109112 1.0 ['COL1A2|p.G742V|1|0.33|ENSG00000164692|chr7:94420578-94420578|G/T|missense_variant'] 360 19574 AAKDQKLSRGH True H1975_Epitope_Rep2 1209.65781779425 1209.65617490379 81.222 3 -1.3877738204711407 0.4023161181953678 1.0 ['ENST00000551650.1_1_12:104238130-104238388:+|nuORF'] 77463 12430 NSVPAAYYLRP True H1975_Epitope_Rep3 1249.64552177505 1249.6444299358602 53.002 2 -1.3878268330443888 0.4023184291459664 1.0 ['ENSG00000174145|ENST00000309447|NWD2'] 78522 25147 NYPNIFRIS True PC9_epitope_Rep5 1122.5821932425 1122.58054490379 101.87 3 -1.3878456939056942 0.4023184291459664 1.0 ['ENSG00000183862|ENST00000329903|CNGA2', 'CNGA2|p.G533Afs*28|1|0.31|ENSG00000183862|chrX:151744099-151744099|G/-|frameshift_variant', 'ENSG00000198515|ENST00000514170|CNGA1'] 49173 7900 KELQAEQEDRA True H1975_Epitope_Rep1 1315.63680756615 1315.6357099358602 35.339 2 -1.3878911897922115 0.4023207399872253 1.0 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242169444-242174670:-|nuORF'] 29050 13172 FTFDLAYWSHN True NCI_RA007_Epitope_Rep2 1399.61970095003 1399.6186099358601 55.868 2 -1.3879219285664346 0.4023207399872253 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 79814 20190 PEEWSYLDPAQ True PC9_epitope_Rep1 1333.58264673497 1333.58101490379 82.49 3 -1.3879983924880361 0.40233963781744203 1.0 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 21117 22007 ERAGGRHG True PC9_epitope_Rep4 838.4157966237399 838.41468993586 92.871 2 -1.3880228193125344 0.4023537760955704 1.0 ['ENST00000300249.9_1_18:32621372-32650196:+|nuORF'] 45167 19268 IPPMLIIF True NCI_RA007_Epitope_Rep5 942.5612471159 942.56014993586 80.979 2 -1.388067561602495 0.4023537760955704 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 43918 8553 IIAYGGLL True PC9_epitope_Rep1 818.4901903506199 818.48908993586 37.736 2 -1.3880959752689463 0.40236791370480324 1.0 ['SLC9A2|p.R438L|1|0.14|ENSG00000115616|chr2:102684224-102684224|G/T|missense_variant'] 125293 23227 VIMNKVLRF True PC9_epitope_Rep2 1118.66342076866 1118.66232993586 94.826 2 -1.3881179375634554 0.40236791370480324 1.0 ['MROH9|p.I146M|1|0.2|ENSG00000117501|chr1:170965213-170965213|C/G|missense_variant'] 65187 10914 LQQQVQEQQLL True PC9_epitope_Rep5 1353.7252286477299 1353.7241299358602 46.97 2 -1.3883073936782993 0.402410465061267 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 75848 8745 NLPPRIFAQCW True NCI_RA007_Epitope_Rep2 1343.68086173795 1343.6797699358601 38.662 2 -1.3883224871623954 0.40241753302818484 1.0 ['ENST00000360304.7_2_3:123419304-123419451:-|nuORF'] 61146 17721 LIKEHTKI True PC9_epitope_Rep4 980.60186605792 980.60076993586 76.188 2 -1.3885277317477542 0.4024789771853674 1.0 ['ENST00000505150.5_1_4:169411574-169413987:-|nuORF'] 92268 20886 RLKTEKEK True PC9_epitope_Rep6 1030.61349337078 1030.6123899358602 93.111 2 -1.3885377077665464 0.4024789771853674 1.0 ['ENST00000379618.6_1_5:114515749-114515857:-|nuORF'] 121429 14662 VEVYRSTK True PC9_epitope_Rep1 980.5290950404799 980.52798993586 61.218 2 -1.3886304872416768 0.40248604409121014 1.0 ['ENSG00000153201|ENST00000283195|RANBP2', 'RANBP2|p.L369Kfs*5|1|0.07|ENSG00000153201|chr2:108748957-108748958|TT/-|frameshift_variant'] 46083 10066 ISHCAGGR True NCI_RA007_Epitope_Rep1 799.3759059577098 799.37480993586 43.164 2 -1.388700960575877 0.4025285915343039 1.0 ['ENST00000300584.7_1_15:78290174-78290387:-|nuORF'] 102324 16760 SLSRPGPAAPV True PC9_epitope_Rep6 1050.5821932425 1050.58108993586 76.959 2 -1.3887169953393443 0.40253565768621236 1.0 ['nc|ENSG00000099849|Q02833-3|RASSF7', 'nc|ENSG00000099849|Q02833-2|RASSF7', 'ENSG00000099849|ENST00000397583|RASSF7'] 103882 11575 SPYWEERIFYL True NCI_RA007_Epitope_Rep1 1501.72416601857 1501.7230699358602 48.993 2 -1.388770718059704 0.4025378129397713 1.0 ['ENSG00000083799|ENST00000427738|CYLD', 'nc|ENSG00000083799|Q9NQC7-2|CYLD', 'ENST00000569891.5_1_16:50783609-50818363:+|nuORF'] 101866 5495 SLPKTSTR True NCI_RA007_Epitope_Rep3 888.50288029264 888.50178993586 28.618 2 -1.388777654586952 0.4025378129397713 1.0 ['ENST00000424011.6_2_16:66646756-66647017:+|nuORF'] 131655 16888 VTLTSIVP True PC9_epitope_Rep3 828.49566965388 828.49456993586 70.115 2 -1.38881320311046 0.4025378129397713 1.0 ['ENSG00000165912|ENST00000298838|PACSIN3'] 86088 21448 QHSTFTGRF True PC9_epitope_Rep1 1079.5148419586699 1079.51374993586 87.338 2 -1.3888702153988728 0.4025378129397713 1.0 ['ENSG00000184305|ENST00000509176|CCSER1'] 18497 8765 EKFDRSSW True NCI_RA007_Epitope_Rep3 1053.4879585044898 1053.48686993586 41.565 2 -1.388955166130262 0.4025378129397713 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'TNIK|p.P670Qfs*14|1|0.22|ENSG00000154310|chr3:171125916-171125916|G/-|frameshift_variant'] 7300 24256 ARGYLKTS True NCI_RA007_Epitope_Rep5 894.49231560894 894.49120993586 100.71 2 -1.3890087087268777 0.4025378129397713 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 16881 15687 EFICPITREL True PC9_epitope_Rep1 1219.6270948295899 1219.6254449037901 65.162 3 -1.3890193999368843 0.4025378129397713 1.0 ['nc|ENSG00000196151|Q8N9V3-2|WDSUB1', 'ENSG00000196151|ENST00000359774|WDSUB1'] 123198 12764 VGLDLERR True NCI_RA007_Epitope_Rep2 956.54032843052 956.53922993586 54.268 2 -1.3891021222561846 0.4025519435213982 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 41721 4175 IALETAMT True PC9_epitope_Rep4 848.43135514516 848.43024993586 22.413 2 -1.3891214012877726 0.4025519435213982 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 46193 11186 ISMEIRESVE True H1975_Epitope_Rep3 1191.58053855999 1191.57944993586 48.125 2 -1.3891435384643736 0.40255900856156285 1.0 ['DYNC2H1|p.K3057M|1|0.39|ENSG00000187240|chr11:103222092-103222092|A/T|missense_variant'] 91603 15801 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 65.964 3 -1.3892436628888576 0.40257789865783716 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 96706 10819 SALKEYEK True PC9_epitope_Rep5 966.5022115862998 966.50110993586 46.605 2 -1.3893239380236566 0.40259678830735757 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 110243 9775 TERDYVRYL True PC9_epitope_Rep2 1213.6091362663299 1213.60750490379 42.937 3 -1.3893533572474073 0.40260385256660397 1.0 ['TRIO|p.D1987Y|1|0.62|ENSG00000038382|chr5:14472638-14472638|G/T|missense_variant'] 80397 8193 PGIDFRGGPA True PC9_epitope_Rep4 985.4981292653698 985.49702993586 38.973 2 -1.389411763830887 0.40261091665878346 1.0 ['ENSG00000198597|ENST00000355537|ZNF536', 'ZNF536|p.L845I|1|0.19|ENSG00000198597|chr19:30548152-30548152|C/A|missense_variant'] 12717 11357 DLEAVRAAA True H1975_Epitope_Rep1 914.4821448480599 914.48104993586 48.662 2 -1.3894686817479627 0.40265329770378605 1.0 ['nc|ENSG00000042062|Q96MK2|RIPOR3', 'ENSG00000042062|ENST00000327979|RIPOR3'] 92164 14266 RLFFPEDP True PC9_epitope_Rep1 1019.5076313199098 1019.50652993586 59.698 2 -1.389492849333432 0.40265329770378605 1.0 ['ENSG00000175309|ENST00000308158|PHYKPL', 'ENST00000493197.5_1_5:177656705-177658704:-|nuORF', 'ENST00000511716.1_1_5:177653644-177659518:-|nuORF'] 5477 15839 ALWAIPSEL True PC9_epitope_Rep2 998.54368247546 998.54258993586 66.183 2 -1.3895179334549834 0.40265329770378605 1.0 ['nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 19753 18970 ELRYRDVQERY True H1975_Epitope_Rep3 1525.7637394147696 1525.76264993586 79.558 2 -1.389550631369194 0.40265329770378605 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.F1569Sfs*24|1|0.14|ENSG00000197653|chr12:123838611-123838611|C/-|frameshift_variant', 'DNAH10|p.K1629Rfs*13|1|0.48|ENSG00000197653|chr12:123841424-123841424|A/-|frameshift_variant'] 38676 14525 HFVAVILM True PC9_epitope_Rep5 928.52044493308 928.5198949679301 60.869 1 -1.3896116686011932 0.40265329770378605 1.0 ['ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF', 'SPEN-CERS4|1|fusion', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF'] 46266 7734 ISPELGVVFF True H1975_Epitope_Rep1 1106.60119735158 1106.60010993586 34.711 2 -1.3896140375404853 0.40265329770378605 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 21605 5506 ERRDMESFWKL True NCI_RA007_Epitope_Rep5 1495.7241831019098 1495.7225249037901 27.868 3 -1.389664158359157 0.4026579015819717 1.0 ['nc|ENSG00000010803|Q96GD3-3|SCMH1', 'nc|ENSG00000010803|Q96GD3|SCMH1', 'ENSG00000010803|ENST00000695335|SCMH1'] 119318 16145 VAMVFQWFHST True PC9_epitope_Rep2 1351.6383282196298 1351.6372299358602 67.358 2 -1.3896664403594798 0.4026579015819717 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79', 'UNC79|p.D1264Gfs*29|1|0.2|ENSG00000133958|chr14:93612828-93612829|-/A|frameshift_variant', 'UNC79|p.G1658Afs*22|1|0.28|ENSG00000133958|chr14:93622205-93622205|G/-|frameshift_variant'] 84948 8540 QEEKDKLLK True H1975_Epitope_Rep3 1129.6342883850098 1129.6331899358602 37.837 2 -1.3896863062979905 0.4026579015819717 1.0 ['ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 57501 14226 LEDLDSLGVL True PC9_epitope_Rep4 1072.56520576568 1072.5641099358602 62.629 2 -1.389687124428208 0.4026579015819717 1.0 ['ACOT9-APOO|2|fusion', 'ENSG00000123130|ENST00000379303|ACOT9', 'nc|ENSG00000123130|Q9Y305-3|ACOT9', 'ACOT9-APOO|1|fusion', 'nc|ENSG00000123130|Q9Y305-2|ACOT9', 'nc|ENSG00000123130|Q9Y305|ACOT9'] 59896 14042 LGGIDLGGWIF True PC9_epitope_Rep5 1146.60734536118 1146.60568490379 59.028 3 -1.3897300916094708 0.40266496411638825 1.0 ['ENST00000429210.1_1:206135358-206135544:-|nuORF'] 124680 8925 VGYLGFAT True NCI_RA007_Epitope_Rep4 826.4225047136199 826.42140993586 41.165 2 -1.3898085715913313 0.4026812313803376 1.0 ['ENST00000395850.7_1_11:33730857-33731043:-|nuORF'] 107 18784 AAASKKKP True PC9_epitope_Rep2 799.49158733295 799.49048993586 77.624 2 -1.3898167368317174 0.4026812313803376 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 12997 15091 DLLYRLLT True PC9_epitope_Rep1 1005.58588164061 1005.58478993586 62.867 2 -1.3898193391376246 0.4026812313803376 1.0 ['ENSG00000104517|ENST00000520539|UBR5', 'nc|ENSG00000104517|O95071-2|UBR5'] 72529 22777 MLISKLEKNKN True PC9_epitope_Rep4 1316.7486069445997 1316.74750993586 95.833 2 -1.3898500190258827 0.4026812313803376 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 138150 7627 YGLHPGNY True NCI_RA007_Epitope_Rep2 919.41881631551 919.41770993586 34.293 2 -1.3898767143808493 0.4026812313803376 1.0 ['ENSG00000181481|ENST00000328381|RNF135'] 9420 8262 AVTRYVSSGTF True H1975_Epitope_Rep1 1186.59823722946 1186.5971499358602 36.718 2 -1.3898923744314637 0.4026812313803376 1.0 ['ENST00000568546.5_3_16:2025038-2025397:+|nuORF'] 33773 7367 GLKVVGGK True NCI_RA007_Epitope_Rep3 756.4857736765198 756.48466993586 36.104 2 -1.3898985065550056 0.4026812313803376 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'RIMS2|p.S809Kfs*25|1|0.17|ENSG00000176406|chr8:103975486-103975487|-/A|frameshift_variant', 'nc|ENSG00000176406|Q9UQ26-5|RIMS2', 'nc|ENSG00000176406|Q9UQ26-4|RIMS2', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'ENST00000524197.1_1_6:72926891-72975792:+|nuORF', 'nc|ENSG00000079841|Q86UR5-2|RIMS1'] 93021 17243 RPLARVTS True NCI_RA007_Epitope_Rep5 898.53484912726 898.53374993586 73.099 2 -1.3899899854981206 0.4026812313803376 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000486354.1_1_10:5488686-5494790:+|nuORF'] 121714 20325 VFLFLKKVSPF True PC9_epitope_Rep5 1323.79548048403 1323.7943899358602 83.217 2 -1.3900255336674507 0.4026812313803376 1.0 ['ENST00000336278.8_1_16:69337832-69338117:+|nuORF'] 30348 16457 GAARGRKL True NCI_RA007_Epitope_Rep2 827.5089687325899 827.5084249679301 68.742 1 -1.3902006445479247 0.4027449404198979 1.0 ['ENST00000461325.1_1_3:52550393-52550435:+|nuORF'] 66019 7148 LSEEDRVV True H1975_Epitope_Rep3 945.4767251144499 945.47562993586 32.467 2 -1.3902286498349186 0.4027449404198979 1.0 ['ENSG00000141759|ENST00000269601|TXNL4A'] 17685 24395 EHLRELPWK True NCI_RA007_Epitope_Rep5 1206.6509415086596 1206.6498499358602 101.3 2 -1.3902340653302088 0.4027449404198979 1.0 ['ENSG00000134109|ENST00000256497|EDEM1'] 38130 3315 HCRARRSRWWL True NCI_RA007_Epitope_Rep1 1525.7949374870898 1525.79329490379 16.791 3 -1.3902366298187188 0.4027449404198979 1.0 ['ENST00000317961.8_2_Y:21906580-21906733:-|nuORF'] 29947 8958 FWDQWYLWYLR True H1975_Epitope_Rep1 1674.7983340183398 1674.79722993586 39.36 2 -1.3903039860632507 0.40276382206565553 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 79702 8366 PDSSNSPLRY True H1975_Epitope_Rep3 1134.53055159246 1134.5294499358602 37.163 2 -1.390375390420036 0.4027708820956569 1.0 ['CDH7|p.V411L|1|0.12|ENSG00000081138|chr18:65844061-65844061|G/T|missense_variant'] 5174 14782 ALLVPALA True H1975_Epitope_Rep1 766.49527573106 766.4947249679301 62.084 1 -1.3904518364134248 0.4027779419587446 1.0 ['ENST00000578151.1_1_17:56787228-56811489:+|nuORF'] 66703 16585 LSLEEEARF True PC9_epitope_Rep2 1092.54513902744 1092.5440499358601 69.031 2 -1.3905624230591396 0.40279206118420274 1.0 ['nc|ENSG00000103199|O60304-2|ZNF500', 'ENSG00000103199|ENST00000219478|ZNF500'] 121585 11964 VFEVFFLLL True PC9_epitope_Rep1 1125.6474192680098 1125.64576490379 50.885 3 -1.3905668910397333 0.40279206118420274 1.0 ['ENST00000595222.5_1_19:56880178-56884554:+|nuORF'] 124013 10491 VGSFVGSG True NCI_RA007_Epitope_Rep5 708.3442543929199 708.3437049679301 46.985 1 -1.390693075550576 0.402799120546585 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 46408 6657 ISSMLGRMANP True PC9_epitope_Rep1 1175.57909909135 1175.57800993586 30.411 2 -1.3906989629449682 0.4028014184397163 1.0 ['ENSG00000161267|ENST00000392379|BDH1'] 10347 21356 CFVEFGAGK True NCI_RA007_Epitope_Rep5 956.4425885351998 956.44148993586 89.204 2 -1.3907451293688007 0.4028014184397163 1.0 ['ENST00000482437.5_1_1:100606401-100609704:+|nuORF', 'ENSG00000122435|ENST00000370141|TRMT13'] 122909 4602 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 23.071 2 -1.3907800162207977 0.402808477441165 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 116020 16298 TSLRVGRK True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56030993586 71.81 2 -1.390894219171256 0.40283441485526517 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 104430 23208 SQLHRPPPPPV True PC9_epitope_Rep2 1223.67749060967 1223.67583490379 94.752 3 -1.3909005391173206 0.40283441485526517 1.0 ['ENST00000252032.9_1_20:3362138-3388256:-|nuORF'] 82033 11046 PLVWNHFCM True PC9_epitope_Rep2 1145.5150422828099 1145.51338490379 47.808 3 -1.3909293816332224 0.4028414732163964 1.0 ['ENSG00000197748|ENST00000357060|CFAP43', 'nc|ENSG00000197748|Q8NDM7-2|CFAP43'] 100798 8154 SLEGSRWP True PC9_epitope_Rep5 930.45593010022 930.45482993586 36.303 2 -1.3910367038352223 0.4028555894381013 1.0 ['ENSG00000183397|ENST00000329493|TEKTIP1'] 92941 24088 RPGRPRGPL True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 99.187 2 -1.3910821492996506 0.4028555894381013 1.0 ['ENST00000424094.6_1_20:57425716-57425887:-|nuORF'] 123334 17438 VGLRWRPL True NCI_RA007_Epitope_Rep1 995.6028691174299 995.60176993586 71.965 2 -1.3911753084354217 0.40288858159297475 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 15008 16029 DYKGDATVFF True PC9_epitope_Rep1 1161.5342399905699 1161.5331499358601 66.468 2 -1.3912056560338757 0.40288858159297475 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 15921 10059 EDLNFDTKNVP True H1975_Epitope_Rep3 1290.60919583598 1290.60808993586 43.73 2 -1.3912056946688713 0.40288858159297475 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26', 'ENST00000466890.1_1_10:27366152-27369594:-|nuORF'] 59320 15452 LFICILVP True NCI_RA007_Epitope_Rep5 916.54559705176 916.54448993586 66.134 2 -1.3912170897168916 0.40289087707272103 1.0 ['ENST00000418390.6_1_1:24088355-24088499:+|nuORF'] 58677 10472 LERLKSSVK True NCI_RA007_Epitope_Rep3 1058.64479349906 1058.64368993586 48.255 2 -1.3912378395605138 0.40289087707272103 1.0 ['ENSG00000105928|ENST00000645220|GSDME', 'nc|ENSG00000105928|O60443-3|GSDME', 'nc|ENSG00000105928|O60443-2|GSDME'] 52347 24206 KKKKKVQLTL True PC9_epitope_Rep4 1212.8281775946398 1212.8265449037901 101.59 3 -1.391273534024087 0.4028979340991822 1.0 ['ENST00000527958.5_1_11:117041336-117041564:+|nuORF'] 70722 22182 LWRLPEKV True PC9_epitope_Rep4 1039.6178504752297 1039.61674993586 93.566 2 -1.3913581122376635 0.4029143424411459 1.0 ['HTR3A|p.D199Rfs*29|1|0.3|ENSG00000166736|chr11:113986062-113986063|-/C|frameshift_variant', 'HTR3A|p.N269Tfs*20|1|0.15|ENSG00000166736|chr11:113986611-113986611|C/-|frameshift_variant', 'HTR3A|p.F454Sfs*6|1|0.17|ENSG00000166736|chr11:113989685-113989685|A/-|frameshift_variant', 'nc|ENSG00000166736|P46098-3|HTR3A', 'ENSG00000166736|ENST00000504030|HTR3A', 'nc|ENSG00000166736|P46098-4|HTR3A', 'nc|ENSG00000166736|P46098-2|HTR3A', 'nc|ENSG00000166736|P46098-5|HTR3A'] 36371 22238 GVFFLFFG True PC9_epitope_Rep6 932.4796256669198 932.47907496793 98.495 1 -1.3913643706663308 0.4029143424411459 1.0 ['ENST00000545113.1_1_12:21654752-21659919:+|nuORF', 'ENST00000545093.5_1_12:21654752-21665258:+|nuORF', 'ENSG00000111711|ENST00000229314|GOLT1B'] 103544 24154 SPRVVPGR True PC9_epitope_Rep1 866.5086343794198 866.50752993586 97.723 2 -1.3913834139709036 0.4029143424411459 1.0 ['ENST00000345306.10_2_5:68665685-68667980:+|nuORF'] 62990 14158 LLPNPDPFL True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 62.362 2 -1.3913868775461122 0.4029143424411459 1.0 ['ENST00000468737.1_1_3:50329212-50329380:-|nuORF'] 81938 21200 PLSSEQLKF True PC9_epitope_Rep5 1047.5600608155898 1047.5589699358602 86.593 2 -1.3914345122215177 0.40292139877329614 1.0 ['ENST00000454652.6_1_3:183398148-183398247:+|nuORF'] 36754 13125 GVKKLFIF True NCI_RA007_Epitope_Rep5 950.5953241254998 950.59422993586 57.162 2 -1.391623714535244 0.40302299747098724 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 109415 8364 TDEPCIKCPE True NCI_RA007_Epitope_Rep5 1133.4732966101299 1133.47277496793 38.844 1 -1.3916931941846695 0.40302528952966205 1.0 ['AFAP1L2|p.P582T|1|0.37|ENSG00000169129|chr10:114300489-114300489|G/T|missense_variant'] 40346 21343 HQRFESRMS True NCI_RA007_Epitope_Rep3 1176.54582481712 1176.54418490379 92.773 3 -1.3917014759856405 0.40302528952966205 1.0 ['MYO1B|p.H488R|1|0.18|ENSG00000128641|chr2:191385993-191385993|A/G|missense_variant'] 101831 8066 SLPGRSVPPP True H1975_Epitope_Rep3 1005.5607295219298 1005.55962993586 35.999 2 -1.3918669964597863 0.40303868056047826 1.0 ['nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2'] 71559 15683 MAYYRIYRRWH True H1975_Epitope_Rep3 1613.80377083529 1613.8026699358602 65.749 2 -1.3919411808566222 0.40303868056047826 1.0 ['MTNR1B|p.H149Y|1|0.22|ENSG00000134640|chr11:92981668-92981668|C/T|missense_variant'] 23217 9258 EVLYIQRPIEE True NCI_RA007_Epitope_Rep1 1387.7347307022699 1387.7330849037899 40.008 3 -1.391957442067528 0.40303868056047826 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 114947 17048 TQTRQERL True NCI_RA007_Epitope_Rep3 1030.5519557433797 1030.55084993586 74.921 2 -1.391963805392643 0.40303868056047826 1.0 ['ENST00000322177.5_1_15:75249143-75249248:-|nuORF'] 120980 10416 VEPLEKITDAY True NCI_RA007_Epitope_Rep5 1276.65508339924 1276.6539899358602 46.693 2 -1.391964264388665 0.40303868056047826 1.0 ['ENSG00000174231|ENST00000304992|PRPF8'] 63134 19119 LLRHRLKTHTT True NCI_RA007_Epitope_Rep4 1374.82080079842 1374.8191649037901 82.687 3 -1.3919690773325466 0.40303868056047826 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000549395.1_1_12:51450168-51451905:+|nuORF', 'ENST00000380135.7_1_12:51450138-51451833:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-5|LETMD1', 'ENST00000546814.1_1_12:51450084-51453211:+|nuORF', 'ENST00000552433.1_1_12:51449776-51450294:+|nuORF', 'ENST00000548516.5_1_12:51450138-51453211:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-4|LETMD1'] 12974 10847 DLLNFAAETLV True H1975_Epitope_Rep3 1204.63395403184 1204.6328499358601 46.805 2 -1.392003452815498 0.40303868056047826 1.0 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 91790 23773 RKHELLAKA True NCI_RA007_Epitope_Rep4 1064.6454622053998 1064.6443699358601 103.06 2 -1.3920493024451923 0.40303868056047826 1.0 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF', 'PIAS3|p.P118Lfs*12|1|0.07|ENSG00000131788|chr1:145856678-145856678|G/-|frameshift_variant', 'ENST00000484423.5_1_1:145576054-145578613:+|nuORF'] 39387 23389 HKKKFNKGST True NCI_RA007_Epitope_Rep5 1173.6618405455297 1173.66019490379 97.261 3 -1.392058270601496 0.40303868056047826 1.0 ['PES1|p.V54F|1|0.14|ENSG00000100029|chr22:30588119-30588119|C/A|missense_variant'] 26852 14353 FLDDRHRWQRL True H1975_Epitope_Rep3 1540.801127983 1540.80002993586 60.557 2 -1.392076886666211 0.40303868056047826 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 23511 21004 EVVHSNNM True NCI_RA007_Epitope_Rep5 928.40726565564 928.40616993586 87.802 2 -1.3921184252188195 0.40303868056047826 1.0 ['ENST00000271469.7_2_1:162569461-162569569:+|nuORF'] 30608 8326 GAKDKKERP True PC9_epitope_Rep3 1027.5774422152297 1027.5763499358602 36.998 2 -1.3921252914593947 0.40303868056047826 1.0 ['ITPR3|p.A1143G|1|0.23|ENSG00000096433|chr6:33676913-33676913|C/G|missense_variant'] 61495 11483 LKDIIWVRAP True PC9_epitope_Rep4 1209.72337817293 1209.7217249037901 51.932 3 -1.392126368655379 0.40303868056047826 1.0 ['ENST00000262187.9_1_7:151163972-151164125:-|nuORF'] 81175 25340 PKGKPLAL True PC9_epitope_Rep2 822.5327238689399 822.53217496793 103.15 1 -1.392128538040536 0.40303868056047826 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 31884 9941 GELMFMERY True H1975_Epitope_Rep3 1174.5151018524598 1174.51457496793 43.27 1 -1.3921288828868859 0.40303868056047826 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF', 'ENST00000554557.5_1_14:68248216-68272009:-|nuORF', 'ZFYVE26|p.Q1242Kfs*9|1|0.24|ENSG00000072121|chr14:67783429-67783429|C/-|frameshift_variant'] 81176 24608 PKGKPLAL True PC9_epitope_Rep4 822.5327238689399 822.53217496793 103.15 1 -1.3921450495246965 0.40303868056047826 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 109344 8220 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep3 1286.5311461188496 1286.5305749679299 36.601 1 -1.3922408462678273 0.40303868056047826 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 101382 11723 SLKEPEPLRSP True H1975_Epitope_Rep1 1251.6823012065897 1251.6812099358601 50.084 2 -1.3922735496977665 0.40303868056047826 1.0 ['ENST00000443361.1_1_9:108285096-108287232:+|nuORF'] 81178 24869 PKGKPLAL True PC9_epitope_Rep4 822.5327238689399 822.53217496793 104.17 1 -1.3923183571198285 0.40303868056047826 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 123422 12484 VGNGKGAA True NCI_RA007_Epitope_Rep3 672.3554877829599 672.35493496793 56.332 1 -1.3923270319706862 0.40303868056047826 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 70522 12377 LVWLLLIFH True H1975_Epitope_Rep2 1152.70593720364 1152.70429490379 52.695 3 -1.3923438404696264 0.40303868056047826 1.0 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 81173 25712 PKGKPLAL True PC9_epitope_Rep1 822.5327238689399 822.53217496793 103.94 1 -1.3923634297612175 0.40303868056047826 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 67062 9685 LSQALIQSLA True PC9_epitope_Rep2 1042.60225998074 1042.60116993586 42.593 2 -1.392395373459213 0.40305278578517084 1.0 ['ENSG00000196132|ENST00000328439|MYT1', 'nc|ENSG00000196132|Q01538-2|MYT1'] 81174 25792 PKGKPLAL True PC9_epitope_Rep1 822.5327238689399 822.53217496793 104.28 1 -1.392421198959595 0.40305278578517084 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 29968 26336 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 108.99 3 -1.392550985769014 0.40305983814755747 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 91085 10913 RFMLEVTEMF True NCI_RA007_Epitope_Rep4 1301.6148158937297 1301.61316490379 48.838 3 -1.3926471345131115 0.4030621286046759 1.0 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70-2|COL6A5'] 81170 25179 PKGKPLAL True NCI_RA007_Epitope_Rep5 822.5327238689399 822.53217496793 104.37 1 -1.3926845693676593 0.4030621286046759 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 22514 17008 ETGRQRGAS True PC9_epitope_Rep4 960.4737054226798 960.47260993586 73.415 2 -1.392728876424578 0.40308291991495393 1.0 ['ENSG00000249156|ENST00000503184|TAF11L12'] 61280 11552 LIPPEDTR True H1975_Epitope_Rep3 939.50254593947 939.50144993586 49.562 2 -1.3927895972219015 0.40308291991495393 1.0 ['nc|ENSG00000183853|Q96J84-2|KIRREL1', 'ENSG00000183853|ENST00000359209|KIRREL1'] 9266 22031 AVPLVPLT True H1975_Epitope_Rep1 808.50584041476 808.50474993586 91.641 2 -1.3927908053768443 0.40308291991495393 1.0 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 102085 7783 SLRGGSPP True H1975_Epitope_Rep3 769.40825163181 769.40770496793 34.923 1 -1.392799592515266 0.40308291991495393 1.0 ['ENST00000361490.8_1_10:100176929-100177052:-|nuORF'] 81172 25365 PKGKPLAL True NCI_RA007_Epitope_Rep5 822.5327238689399 822.53217496793 105.1 1 -1.3928086032347637 0.40308291991495393 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 132710 10961 VVHHRIHTG True PC9_epitope_Rep2 1054.57844527474 1054.57787496793 47.483 1 -1.3928394818482202 0.40308291991495393 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 74563 22810 NFVIKSLT True PC9_epitope_Rep6 920.53311779176 920.53202993586 100.83 2 -1.392839992291557 0.40308291991495393 1.0 ['ENST00000508935.1_1_5:102509577-102509760:+|nuORF'] 80256 3649 PGAVETTL True NCI_RA007_Epitope_Rep2 786.41233395274 786.41122993586 18.843 2 -1.3929326094598526 0.40308291991495393 1.0 ['ENST00000382938.3_1_15:29363239-29394119:+|nuORF'] 39345 23549 HKDREELF True H1975_Epitope_Rep1 1072.53015766964 1072.5290699358602 97.824 2 -1.3929806670226863 0.40308291991495393 1.0 ['ERICH3|p.S1197F|1|0.14|ENSG00000178965|chr1:74572120-74572120|G/A|missense_variant'] 91795 23912 RKHQKRKRHLE True PC9_epitope_Rep2 1514.90184508378 1514.90020490379 97.455 3 -1.3929956627913453 0.40308291991495393 1.0 ['ENSG00000166432|ENST00000651725|ZMAT1', 'nc|ENSG00000166432|Q5H9K5-2|ZMAT1', 'nc|ENSG00000166432|Q5H9K5|ZMAT1'] 120979 15604 VEPKRTVSRED True NCI_RA007_Epitope_Rep1 1314.6891774921799 1314.68808993586 64.785 2 -1.3930104698007726 0.40308291991495393 1.0 ['ENST00000457695.2_1_X:100110922-100111255:-|nuORF'] 19370 11550 ELLQRAAAGG True PC9_epitope_Rep2 984.5352430500798 984.53414993586 49.753 2 -1.3930240851025322 0.40308291991495393 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000487875.5_1_15:91491769-91496943:+|nuORF', 'nc|ENSG00000140553|Q9H3U1-3|UNC45A', 'ENST00000471780.1_1_15:91493362-91496943:+|nuORF'] 22870 7173 EVDEFHLILEY True H1975_Epitope_Rep3 1405.67654711981 1405.6754499358601 32.566 2 -1.3930699603488446 0.40308291991495393 1.0 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000569517.5_1_15:73047978-73075652:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 13094 4965 DLQKFFCDFVT True PC9_epitope_Rep3 1361.6325741328499 1361.63092490379 24.192 3 -1.3931327488232332 0.4030852094209917 1.0 ['nc|ENSG00000153789|Q6ZTR7|CIBAR2', 'ENSG00000153789|ENST00000539556|CIBAR2'] 19482 10483 ELNYTVPVP True NCI_RA007_Epitope_Rep1 1030.5335117145798 1030.5324099358602 44.761 2 -1.3931352283048273 0.4030852094209917 1.0 ['SLC22A2|p.G77V|1|0.06|ENSG00000112499|chr6:160258528-160258528|C/A|missense_variant'] 61198 19328 LILIASYKVI True PC9_epitope_Rep5 1131.72673221787 1131.72508490379 79.39 3 -1.393223686902048 0.40309400094473313 1.0 ['OR4C6|p.T217K|1|0.08|ENSG00000181903|chr11:55665816-55665816|C/A|missense_variant'] 64265 6976 LPHKELRFIIY True NCI_RA007_Epitope_Rep2 1427.82890587063 1427.82727490379 31.758 3 -1.3933844404704008 0.40309400094473313 1.0 ['ENSG00000182858|ENST00000330817|ALG12'] 34269 16324 GNTLTSLK True H1975_Epitope_Rep3 832.46543215476 832.46432993586 68.265 2 -1.3934110800217707 0.40309400094473313 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 112649 20427 TLFLQTVW True H1975_Epitope_Rep3 1006.5487678559 1006.54766993586 85.406 2 -1.3934462815949442 0.40309400094473313 1.0 ['ENST00000479747.1_1_9:130678362-130679146:-|nuORF'] 137839 17246 YERWWYEKLIN True NCI_RA007_Epitope_Rep2 1598.7881632574597 1598.78706993586 71.819 2 -1.3934522055544056 0.40309400094473313 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 46889 19908 ITLLRELGQ True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 81.972 2 -1.393462036442678 0.40309400094473313 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 136754 12689 WYNRLRITWDP True NCI_RA007_Epitope_Rep1 1518.7731818996597 1518.77208993586 53.34 2 -1.3934756942455386 0.40309400094473313 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'COL14A1|p.R971Sfs*29|1|0.42|ENSG00000187955|chr8:120262910-120262910|G/-|frameshift_variant', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 78922 4670 PAGQKALEA True PC9_epitope_Rep5 883.4763311916298 883.4752299358599 23.017 2 -1.3935464094237506 0.40309400094473313 1.0 ['ENSG00000187189|ENST00000420283|TSPYL4'] 56760 19987 LDLRGRHHEA True PC9_epitope_Rep1 1202.62685201914 1202.62574993586 81.705 2 -1.3935704743923845 0.40309400094473313 1.0 ['ENSG00000132182|ENST00000254508|NUP210'] 134418 23611 VYPLFGHYGRF True PC9_epitope_Rep4 1354.6822416369398 1354.68114993586 99.137 2 -1.3937030746273473 0.40309400094473313 1.0 ['ENSG00000138161|ENST00000392790|CUZD1', 'nc|ENSG00000138161|Q86UP6-2|CUZD1', 'nc|ENSG00000138161|Q86UP6-3|CUZD1'] 100669 14376 SLDLEKEIEF True PC9_epitope_Rep1 1221.6128842340897 1221.61123490379 60.121 3 -1.3937075491908812 0.40309400094473313 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 48491 13607 KAGKGGTG True NCI_RA007_Epitope_Rep4 674.3711378470999 674.3705849679301 59.556 1 -1.3937115674800178 0.40309400094473313 1.0 ['ENSG00000268041|ENST00000597630|ERFL'] 19925 13078 ELVELSTALEH True NCI_RA007_Epitope_Rep1 1239.63468230783 1239.63358993586 54.863 2 -1.3937325381392442 0.40309400094473313 1.0 ['ENSG00000108561|ENST00000225698|C1QBP'] 124684 4924 VGYPGMKPQQH True NCI_RA007_Epitope_Rep1 1240.60227706408 1240.60116993586 23.234 2 -1.393750674256247 0.40309400094473313 1.0 ['nc|ENSG00000144857|Q9BWV1|BOC', 'ENSG00000144857|ENST00000682979|BOC'] 139785 20781 YPGGGGGG True PC9_epitope_Rep5 620.25543938852 620.25489496793 84.986 1 -1.3938043690797752 0.40309400094473313 1.0 ['ENSG00000185668|ENST00000373012|POU3F1'] 126605 17136 VLMAQKEGKR True PC9_epitope_Rep6 1158.65431263694 1158.65320993586 78.498 2 -1.3938290824677422 0.40309400094473313 1.0 ['ENSG00000170949|ENST00000683776|ZNF160'] 124141 22450 VGSRRGRR True PC9_epitope_Rep1 942.5583785364998 942.55783496793 91.168 1 -1.3938370578366623 0.40309400094473313 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 99 6062 AAAQGVKR True PC9_epitope_Rep5 799.46643521427 799.46532993586 28.308 2 -1.3938386770819993 0.40309400094473313 1.0 ['ENST00000392161.3_1_19:36900716-36909439:-|nuORF'] 80960 25996 PIFPWYAFQL True NCI_RA007_Epitope_Rep5 1280.65938093404 1280.65828993586 107.56 2 -1.3938996629639722 0.40311285884673065 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 132864 3513 VVLLRLKL True PC9_epitope_Rep3 952.6797224558 952.67862993586 18.636 2 -1.3939305818911538 0.4031199074183416 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 22869 7007 EVDEFHLILEY True H1975_Epitope_Rep1 1405.67654711981 1405.6754499358601 31.987 2 -1.3940546403081306 0.40313876456903985 1.0 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000569517.5_1_15:73047978-73075652:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 18893 18007 ELDVRITAL True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 74.568 2 -1.3940932179741417 0.40314581266827265 1.0 ['ENSG00000047410|ENST00000367478|TPR'] 36041 13591 GVAAAGHA True NCI_RA007_Epitope_Rep1 652.3292730351201 652.32872496793 56.877 1 -1.3942489742780328 0.40315286060105093 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 40804 27214 HSAAAAAA True PC9_epitope_Rep1 668.32418765468 668.32363496793 111.19 1 -1.3943189176577304 0.40315514777947026 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'EMX2|p.H92Lfs*49|1|0.31|ENSG00000170370|chr10:117543541-117543542|-/T|frameshift_variant', 'nc|ENSG00000170370|Q04743-2|EMX2', 'nc|ENSG00000006377|P56179-2|DLX6', 'ENSG00000006377|ENST00000518156|DLX6', 'ENSG00000166188|ENST00000299237|ZNF319', 'ENSG00000043355|ENST00000376335|ZIC2'] 111591 8193 TIDDKVGAA True NCI_RA007_Epitope_Rep1 888.4552613938798 888.45416993586 35.867 2 -1.394369551809444 0.40315514777947026 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 132250 9923 VTVPSPPP True NCI_RA007_Epitope_Rep5 792.43815477776 792.43704993586 44.811 2 -1.3944884471721761 0.4031976194974495 1.0 ['nc|ENSG00000141441|Q9H706-2|GAREM1', 'nc|ENSG00000141441|Q9H706-3|GAREM1', 'ENSG00000141441|ENST00000269209|GAREM1'] 15365 6547 EAGRLRHR True NCI_RA007_Epitope_Rep1 993.5580441833299 993.55694993586 29.481 2 -1.394523388438332 0.4031999055378439 1.0 ['ENST00000548577.1_17:6915938-6917031:+|nuORF', 'nc|ENSG00000219200|Q6P5S7-2|RNASEK'] 70067 5588 LVNGILPQ True NCI_RA007_Epitope_Rep1 852.5069030439199 852.50580993586 25.801 2 -1.3945278520680304 0.4031999055378439 1.0 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-4|CCDC14', 'ENST00000495381.5_1_3:123633936-123674711:-|nuORF'] 103056 23080 SPGALLPRHR True PC9_epitope_Rep4 1102.63596015086 1102.63537496793 96.999 1 -1.3945651429866028 0.40320695233259735 1.0 ['SF3B3-CDH15|1|fusion', 'ENSG00000129910|ENST00000289746|CDH15'] 126114 13988 VLESAALL True PC9_epitope_Rep2 814.48001958974 814.4794749679301 59.078 1 -1.394717138443453 0.40321399896094084 1.0 ['ENST00000473040.6_1_4:128905516-128956965:+|nuORF', 'nc|ENSG00000164074|Q0P651-3|ABHD18', 'nc|ENSG00000164074|Q0P651-2|ABHD18', 'nc|ENSG00000164074|Q0P651|ABHD18', 'ENSG00000164074|ENST00000645843|ABHD18'] 123641 6284 VGQHLPSV True PC9_epitope_Rep4 835.4552018242299 835.45410993586 31.228 2 -1.394735236057137 0.4032162845065766 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 131487 23230 VTKIREFI True PC9_epitope_Rep3 1004.6018660579199 1004.60076993586 94.629 2 -1.3947495168951594 0.4032162845065766 1.0 ['nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENSG00000223501|ENST00000445902|VPS52', 'VPS52|p.T346Hfs*13|1|0.09|ENSG00000223501|chr6:33267278-33267279|-/A|frameshift_variant'] 53519 22044 KRKVESLWPI True PC9_epitope_Rep1 1254.7448418934998 1254.74320490379 89.606 3 -1.3948096061128987 0.4032185699442713 1.0 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000471813.1_1_7:99008715-99013888:+|nuORF'] 86343 14149 QKAALNVRDNV True NCI_RA007_Epitope_Rep1 1226.67313350522 1226.67202993586 59.069 2 -1.394829966513719 0.4032185699442713 1.0 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 119541 13494 VASPREEL True PC9_epitope_Rep3 899.47124581119 899.47014993586 56.955 2 -1.3948532879917463 0.40322314049586777 1.0 ['ENST00000582319.5_1_17:72477795-72480262:+|nuORF', 'nc|ENSG00000167851|Q9UGN4-3|CD300A', 'nc|ENSG00000167851|Q9UGN4-2|CD300A', 'ENSG00000167851|ENST00000360141|CD300A'] 64577 22485 LPSKLRQQF True PC9_epitope_Rep1 1115.6451278522297 1115.64402993586 91.288 2 -1.394892812141371 0.40322314049586777 1.0 ['ENST00000517951.5_1_5:156822576-156936463:-|nuORF', 'ENSG00000135074|ENST00000257527|ADAM19', 'nc|ENSG00000135074|Q9H013|ADAM19'] 19247 8085 ELKAAYDQRQR True H1975_Epitope_Rep1 1376.71606094636 1376.71441490379 36.042 3 -1.3948968341709707 0.40322314049586777 1.0 ['ENST00000413697.5_1_2:100019089-100065949:-|nuORF', 'nc|ENSG00000135945|Q9UBZ9-2|REV1', 'ENSG00000135945|ENST00000258428|REV1'] 23130 21331 EVKEIFRKSP True PC9_epitope_Rep3 1231.6924719674698 1231.6913699358602 87.346 2 -1.3949113770329482 0.40322314049586777 1.0 ['ENTPD5-ALDH6A1|1|fusion', 'ENSG00000187097|ENST00000334696|ENTPD5'] 3817 18257 AGVFRCPLL True PC9_epitope_Rep1 974.5371576263799 974.53606993586 75.015 2 -1.3949800211303998 0.40325379865645034 1.0 ['ENST00000506326.1_1_3:134085404-134085665:-|nuORF'] 36717 9974 GVIYRLLYQ True NCI_RA007_Epitope_Rep4 1123.6389798426299 1123.6378899358601 45.208 2 -1.3950364436341371 0.40326084389978983 1.0 ['ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 5702 8646 APALELEPA True PC9_epitope_Rep3 909.4807478657299 909.47964993586 38.207 2 -1.3951137644811367 0.4032915008913498 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 79928 14554 PERLVPVSP True PC9_epitope_Rep2 992.5654805492 992.56438993586 61.253 2 -1.3951652627707587 0.40332215715904796 1.0 ['ENSG00000124217|ENST00000244051|MOCS3'] 75303 16613 NILDIVRPP True PC9_epitope_Rep3 1035.6076797143498 1035.60658993586 69.037 2 -1.3951821250889382 0.4033292013458474 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 65355 20578 LRDNKIRQLP True NCI_RA007_Epitope_Rep4 1251.7411534953899 1251.74004993586 89.128 2 -1.395202225526146 0.4033314838206996 1.0 ['ENSG00000083782|ENST00000261172|EPYC'] 63245 11531 LLSLHGGP True PC9_epitope_Rep5 792.4493881678 792.44828993586 49.35 2 -1.3952123768233693 0.4033314838206996 1.0 ['ENST00000433948.5_2_12:50189219-50189822:-|nuORF'] 44378 18322 ILETLDALVDP True PC9_epitope_Rep2 1197.6492697428098 1197.64816993586 75.804 2 -1.3952359520508242 0.4033337661877723 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2', 'ENST00000483634.1_1_6:24408642-24418827:+|nuORF'] 12265 13367 DIKQERDQLLN True PC9_epitope_Rep3 1370.7153922400198 1370.71428993586 56.448 2 -1.3952675560526484 0.4033337661877723 1.0 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158', 'ENST00000504667.2_1_4:77274263-77288776:-|nuORF'] 58246 11150 LELMPFNVL True PC9_epitope_Rep4 1074.57835373202 1074.5772499358602 50.668 2 -1.395383788632142 0.403336048447073 1.0 ['nc|ENSG00000096070|Q9ULD4-3|BRPF3', 'nc|ENSG00000096070|Q9ULD4-2|BRPF3', 'ENSG00000096070|ENST00000357641|BRPF3'] 90019 12404 RDRGYIYWR True H1975_Epitope_Rep2 1283.65233849099 1283.65069490379 52.798 3 -1.3954048791189346 0.403336048447073 1.0 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 89907 14503 RCLYWASPSIP True PC9_epitope_Rep2 1291.6383282196298 1291.6372299358602 61.055 2 -1.3954214501642481 0.4033383305986094 1.0 ['ENST00000597219.1_3_19:58095687-58095951:+|nuORF'] 83044 22481 PSLFAPQHPVM True PC9_epitope_Rep4 1222.61686449906 1222.61521490379 94.705 3 -1.395435183029505 0.4033383305986094 1.0 ['ENST00000376511.6_1_6:30574014-30574328:-|nuORF'] 118759 11323 TYYYLNQG True PC9_epitope_Rep3 1020.4552613938799 1020.45416993586 48.56 2 -1.3955571009557517 0.4033453738461175 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant', 'ENST00000581866.1_1_17:73588547-73589005:+|nuORF', 'ENST00000584516.5_1_17:73587014-73591049:+|nuORF', 'ENSG00000266714|ENST00000645453|MYO15B'] 10490 18702 CITPKRRLTR True NCI_RA007_Epitope_Rep3 1242.7342942931398 1242.73264490379 81.796 3 -1.3956600478275942 0.4033594598422966 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 112385 12433 TLASALVL True NCI_RA007_Epitope_Rep2 786.48510497018 786.4845549679301 52.971 1 -1.3956876587956202 0.4033594598422966 1.0 ['nc|ENSG00000284730|P0DPE3|TMDD1'] 67760 10941 LSYMPIWKF True NCI_RA007_Epitope_Rep5 1183.6099882134697 1183.6088899358601 48.723 2 -1.3957676763544598 0.4033665025909794 1.0 ['nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'ENST00000584684.1_1_17:37873623-37876175:+|nuORF', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF', 'ENST00000582788.5_1_17:37872360-37873734:+|nuORF'] 56686 18742 LDKLSEHKQKK True H1975_Epitope_Rep2 1352.7775985737596 1352.77650993586 77.798 2 -1.3958133055324413 0.4033735451733988 1.0 ['RALGAPA1|p.Q693H|1|0.2|ENSG00000174373|chr14:35723052-35723052|C/A|missense_variant'] 57968 6492 LEGSKWRA True H1975_Epitope_Rep3 945.5032146458099 945.50210993586 29.941 2 -1.39588648760261 0.40341599877241235 1.0 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 13279 13122 DLTETLKSEL True PC9_epitope_Rep1 1147.59723416995 1147.59612993586 55.341 2 -1.3959436430609564 0.4034230406043437 1.0 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1', 'nc|ENSG00000276850|P13928-2|ANXA8'] 29948 9062 FWDQWYLWYLR True H1975_Epitope_Rep1 1674.7983340183398 1674.79722993586 39.767 2 -1.3959848985784948 0.40343236193241505 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 126799 24369 VLPPHLGG True NCI_RA007_Epitope_Rep2 788.45447354824 788.4539249679301 102.35 1 -1.3959928169192874 0.40343236193241505 1.0 ['ENST00000334370.8_1_19:42875618-42879777:+|nuORF'] 45001 8474 IPCYTLDGD True PC9_epitope_Rep5 995.4269980407099 995.42590993586 37.538 2 -1.3960158008019852 0.40343236193241505 1.0 ['ENSG00000138801|ENST00000265174|PAPSS1'] 122379 15912 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 66.354 2 -1.3962076725239887 0.40348185305399825 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2'] 43401 12215 IGELFIHCR True H1975_Epitope_Rep3 1086.56443500338 1086.56332993586 52.158 2 -1.3962100501884556 0.40348185305399825 1.0 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'TRAF7|p.Q637Rfs*29|1|0.26|ENSG00000131653|chr16:2176294-2176294|G/-|frameshift_variant', 'ENSG00000131653|ENST00000326181|TRAF7'] 133234 9987 VVSTSSNK True NCI_RA007_Epitope_Rep2 820.4290466460401 820.4279499358599 43.469 2 -1.3963426129683572 0.4035100142808247 1.0 ['ENSG00000116497|ENST00000373475|S100PBP', 'nc|ENSG00000116497|Q96BU1-2|S100PBP', 'ENST00000531123.5_1_1:33290993-33299636:+|nuORF', 'ENST00000356689.7_1_1:33290993-33299636:+|nuORF'] 22555 13965 ETIQVHRRYWR True H1975_Epitope_Rep1 1542.81677804714 1542.81568993586 58.874 2 -1.3963460698385548 0.4035100142808247 1.0 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 41348 7371 HWPWMKLFFKI True PC9_epitope_Rep6 1531.8162330119496 1531.81459490379 37.545 3 -1.3963814356489184 0.4035100142808247 1.0 ['ENSG00000109063|ENST00000583535|MYH3', 'MYH3|p.L993*|1|0.11|ENSG00000109063|chr17:10639422-10639422|A/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'MYH8|p.A1159Qfs*8|1|0.3|ENSG00000133020|chr17:10400650-10400650|C/-|frameshift_variant'] 68672 20023 LTKDMEYF True PC9_epitope_Rep1 1045.47903361357 1045.4779299358602 81.845 2 -1.3963856112610011 0.4035100142808247 1.0 ['nc|ENSG00000103415|P30519-2|HMOX2', 'ENSG00000103415|ENST00000570646|HMOX2'] 89160 8071 QVRFQHPEENR True H1975_Epitope_Rep1 1438.7065588918197 1438.70546993586 35.989 2 -1.3964437424728904 0.4035145692941357 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN', 'nc|ENSG00000130518|Q9H0B3-2|IQCN'] 122931 24252 VGHSAGHP True NCI_RA007_Epitope_Rep2 760.36163579256 760.36052993586 101.84 2 -1.3965533293742955 0.4035145692941357 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 59553 14746 LFTEDQKL True NCI_RA007_Epitope_Rep3 992.5178616504398 992.51676993586 65.416 2 -1.3965692775162544 0.4035145692941357 1.0 ['ENST00000473975.5_1_2:149987462-150017984:+|nuORF'] 80674 7939 PGTSIPAW True NCI_RA007_Epitope_Rep2 827.41775368635 827.41664993586 35.512 2 -1.3965735516736861 0.4035145692941357 1.0 ['nc|ENSG00000267106|K7EIQ3-2|ZNF561-AS1'] 69754 8301 LVFNKVNI True NCI_RA007_Epitope_Rep4 945.5647522732099 945.56364993586 38.739 2 -1.396662407948695 0.4035216087993013 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 98083 18897 SEREYLEWDEI True PC9_epitope_Rep1 1467.6517889239497 1467.65068993586 77.472 2 -1.3967286581430278 0.4035286481383136 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.M2050Ifs*24|1|0.12|ENSG00000163092|chr2:167248067-167248067|G/-|frameshift_variant', 'XIRP2|p.R1098Ffs*7|1|0.04|ENSG00000163092|chr2:167245207-167245222|TAAGAAAGGGGTGCTT/-|frameshift_variant', 'XIRP2|p.A1392Lfs*11|1|0.36|ENSG00000163092|chr2:167246090-167246090|G/-|frameshift_variant', 'XIRP2|p.G1535Vfs*41|1|0.22|ENSG00000163092|chr2:167246520-167246520|G/-|frameshift_variant', 'XIRP2|p.R1900Efs*5|1|0.1|ENSG00000163092|chr2:167247612-167247612|C/-|frameshift_variant', 'XIRP2|p.G695Vfs*18|1|0.12|ENSG00000163092|chr2:167244000-167244000|G/-|frameshift_variant', 'XIRP2|p.G397Efs*43|1|0.1|ENSG00000163092|chr2:167243105-167243105|G/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 116101 10648 TSRLPPAP True PC9_epitope_Rep1 837.4708518883699 837.46974993586 45.849 2 -1.3970207071427851 0.4035946941087613 1.0 ['ENST00000515795.1_7:286228-299943:+|nuORF'] 120742 14154 VEKPYGRKRKK True H1975_Epitope_Rep1 1387.8412018898296 1387.84010993586 59.617 2 -1.3972379028585267 0.40368434096085537 1.0 ['ENST00000581758.1_1_18:9182415-9208777:+|nuORF'] 131739 8576 VTPKLTSR True PC9_epitope_Rep1 900.53926580136 900.53816993586 37.824 2 -1.3972442711104014 0.40369137813023676 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1'] 39791 4514 HMHELQEWRAY True H1975_Epitope_Rep3 1498.67756726266 1498.67646993586 22.482 2 -1.3973627116782363 0.4037172527731886 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB'] 123729 6914 VGRGGESR True NCI_RA007_Epitope_Rep5 816.42021329784 816.41910993586 33.281 2 -1.3974404831600462 0.4037172527731886 1.0 ['ENST00000576768.5_1_17:77924559-77924604:-|nuORF'] 45766 23118 ISALLRRRRRR True H1975_Epitope_Rep3 1451.93856494567 1451.93692490379 96.547 3 -1.3975897743035002 0.40372428930505894 1.0 ['ENSG00000197380|ENST00000391916|DACT3'] 22399 24279 ETEHLLHD True PC9_epitope_Rep4 992.45632402304 992.45522993586 101.87 2 -1.3977531956964657 0.4037571981497215 1.0 ['ENST00000482526.1_1_6:153319663-153323652:-|nuORF', 'nc|ENSG00000112031|Q9UGC7-4|MTRF1L', 'nc|ENSG00000112031|Q9UGC7-2|MTRF1L', 'ENST00000504731.1_1_4:189659580-189660645:+|nuORF', 'ENSG00000112031|ENST00000367233|MTRF1L'] 18247 12404 EIPVTLII True PC9_epitope_Rep1 896.55826991044 896.55716993586 52.572 2 -1.3977771508640953 0.4037571981497215 1.0 ['ENSG00000122557|ENST00000311350|HERPUD2'] 38284 2061 HEEQYYQYT True NCI_RA007_Epitope_Rep1 1259.50948179471 1259.5083899358601 10.837 2 -1.3978041739131184 0.4037571981497215 1.0 ['ENST00000513178.1_1_4:47954638-48018683:-|nuORF'] 670 13270 AATRLDSR True H1975_Epitope_Rep3 888.4777281739599 888.47662993586 56.302 2 -1.3978263406341116 0.4037642338781049 1.0 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 112445 9921 TLDDQRAL True PC9_epitope_Rep1 930.4770594676199 930.47596993586 43.021 2 -1.397925126691564 0.40378306940740566 1.0 ['ENSG00000183496|ENST00000329713|MEX3B', 'nc|ENSG00000183496|Q6ZN04-3|MEX3B'] 141854 4117 YVDKEKEMWH True NCI_RA007_Epitope_Rep1 1363.6230720783099 1363.62142490379 20.087 3 -1.39794595868919 0.40380190449219444 1.0 ['nc|ENSG00000077800|O75344-3|FKBP6', 'nc|ENSG00000077800|O75344-2|FKBP6', 'ENSG00000077800|ENST00000252037|FKBP6'] 23707 12289 EYEIERSFFLR True NCI_RA007_Epitope_Rep2 1487.7408787118695 1487.73978993586 52.403 2 -1.3980109241543002 0.4038089394439987 1.0 ['SIM1|p.Q753Kfs*9|1|0.21|ENSG00000112246|chr6:100390405-100390405|G/-|frameshift_variant', 'ENSG00000112246|ENST00000369208|SIM1', 'nc|ENSG00000159263|Q14190-2|SIM2', 'ENST00000481185.1_1_21:38072046-38117571:+|nuORF', 'ENSG00000159263|ENST00000290399|SIM2'] 33981 6884 GLSSQHQPVSI True NCI_RA007_Epitope_Rep3 1151.59348620219 1151.5923899358602 34.186 2 -1.3980589528113565 0.4038230088495575 1.0 ['ENST00000586099.1_1_17:33687214-33689981:-|nuORF'] 19087 11686 ELGERGSI True PC9_epitope_Rep5 859.4399456829099 859.43884993586 49.947 2 -1.3981005371050335 0.4038230088495575 1.0 ['ENSG00000189091|ENST00000302516|SF3B3'] 18959 8572 ELEKQEKTKE True H1975_Epitope_Rep1 1260.6561460284 1260.65504993586 37.899 2 -1.3981423481353894 0.40383004330332384 1.0 ['ENSG00000122735|ENST00000242317|DNAI1'] 43607 18266 IGTVPPPAV True PC9_epitope_Rep2 849.4960040070499 849.49490993586 75.582 2 -1.398186585270506 0.4038488767226732 1.0 ['ENST00000452079.5_2_1:3659748-3662767:-|nuORF', 'ENST00000418088.5_2_1:3659748-3662908:-|nuORF'] 110592 4208 TFSKSSSA True NCI_RA007_Epitope_Rep5 813.38684748089 813.3862949679301 22.719 1 -1.3982069699235908 0.403851145668641 1.0 ['ENSG00000141052|ENST00000425538|MYOCD', 'nc|ENSG00000141052|Q8IZQ8|MYOCD', 'nc|ENSG00000141052|Q8IZQ8-2|MYOCD'] 25898 11381 FFLMDLVL True NCI_RA007_Epitope_Rep5 996.5354262908799 996.53432993586 50.428 2 -1.3982728604550776 0.403851145668641 1.0 ['ENSG00000099822|ENST00000251287|HCN2'] 78982 17002 PAKEIKKQV True PC9_epitope_Rep6 1039.6389798426296 1039.6378899358601 77.95 2 -1.39846479539067 0.40387701165699186 1.0 ['ENSG00000082397|ENST00000341928|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-3|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-2|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-4|EPB41L3'] 42601 19533 IEGFMLSK True NCI_RA007_Epitope_Rep1 923.4786396907499 923.47809496793 80.143 1 -1.3985693304792668 0.40387701165699186 1.0 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 17082 5674 EGKMYACQYC True H1975_Epitope_Rep3 1194.4507873437399 1194.44968993586 26.854 2 -1.3985873410087202 0.40387927983199223 1.0 ['ENSG00000184677|ENST00000375647|ZBTB40'] 115932 7462 TSGPLLDRV True H1975_Epitope_Rep2 956.52909504048 956.52798993586 33.65 2 -1.3985903733519216 0.40387927983199223 1.0 ['MIOX|p.T42S|1|0.22|ENSG00000100253|chr22:50487689-50487689|A/T|missense_variant', 'nc|ENSG00000100253|Q9UGB7-2|MIOX', 'ENSG00000100253|ENST00000216075|MIOX'] 124153 8611 VGSSLEQWLSC True H1975_Epitope_Rep2 1207.55432381215 1207.5532299358601 38.078 2 -1.398746365025014 0.4038981111150438 1.0 ['nc|ENSG00000095596|O43174-2|CYP26A1', 'ENSG00000095596|ENST00000224356|CYP26A1'] 127504 21596 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 90.156 2 -1.3988659261310985 0.4039046832605875 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 113925 23432 TNSQIIKEGRR True PC9_epitope_Rep4 1300.7211463267997 1300.71949490379 98.419 3 -1.3988949257338323 0.4039046832605875 1.0 ['CHM|p.Y217N|1|0.39|ENSG00000188419|chrX:85963718-85963718|A/T|missense_variant'] 103612 13310 SPTEDKVLAV True NCI_RA007_Epitope_Rep5 1057.5655401188499 1057.56444993586 57.877 2 -1.3989972910005004 0.4039046832605875 1.0 ['ENSG00000198128|ENST00000359959|OR2L3', 'ENSG00000279263|ENST00000623922|OR2L8'] 12302 9922 DINNPRDFI True H1975_Epitope_Rep1 1102.54072235334 1102.5396299358601 43.1 2 -1.3990044535454185 0.4039046832605875 1.0 ['ENSG00000165841|ENST00000371321|CYP2C19'] 6663 21117 APWQQKNL True PC9_epitope_Rep2 983.5188647099499 983.51776993586 86.686 2 -1.399005994967636 0.4039046832605875 1.0 ['ENST00000475109.5_1_7:35840829-35903188:+|nuORF'] 25860 22463 FFGGIFRLKT True PC9_epitope_Rep4 1184.67061432408 1184.6700749679298 94.636 1 -1.3990312776932594 0.4039046832605875 1.0 ['nc|ENSG00000010030|Q9Y603-6|ETV7', 'nc|ENSG00000010030|Q9Y603-5|ETV7', 'nc|ENSG00000010030|Q9Y603-3|ETV7', 'nc|ENSG00000010030|Q9Y603-7|ETV7', 'nc|ENSG00000010030|Q9Y603-2|ETV7', 'nc|ENSG00000010030|Q9Y603-4|ETV7', 'ENSG00000010030|ENST00000340181|ETV7'] 31512 3632 GEDEYEKA True PC9_epitope_Rep1 939.3821560232699 939.38104993586 18.891 2 -1.3990861791379485 0.4039046832605875 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 121781 7506 VFPAAPGP True NCI_RA007_Epitope_Rep1 754.4013753462199 754.40026993586 33.19 2 -1.399100619064016 0.4039046832605875 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 35035 8282 GQVGEGRGD True PC9_epitope_Rep4 873.3940581196499 873.39296993586 39.317 2 -1.399109613452399 0.4039046832605875 1.0 ['ENST00000274031.7_1_4:140477471-140477915:-|nuORF'] 29076 20056 FTHWFFSF True PC9_epitope_Rep5 1117.50215201665 1117.50104993586 82.199 2 -1.3991147542147884 0.4039046832605875 1.0 ['PDZD8|p.I1116*|1|0.13|ENSG00000165650|chr10:117283387-117283387|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 29749 13284 FVNLKTVL True NCI_RA007_Epitope_Rep4 932.5695033004799 932.56840993586 58.233 2 -1.3991344479025878 0.4039046832605875 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B'] 55591 20323 LAHTRYTF True PC9_epitope_Rep4 1007.5188647099501 1007.51776993586 86.315 2 -1.3991530871584819 0.40391171509124585 1.0 ['ENSG00000182580|ENST00000330394|EPHB3'] 117971 15139 TYASLHGRIY True H1975_Epitope_Rep2 1179.60365696307 1179.60254993586 63.387 2 -1.3993088493809227 0.40396593214740717 1.0 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1', 'nc|ENSG00000050405|Q9UHB6-3|LIMA1', 'nc|ENSG00000050405|Q9UHB6-2|LIMA1', 'nc|ENSG00000050405|Q9UHB6-5|LIMA1'] 12168 13143 DIEQIRREYSS True H1975_Epitope_Rep3 1394.6790067313 1394.67790993586 55.803 2 -1.3993402787781988 0.40398475929836153 1.0 ['DOCK4|p.L1501*|1|0.32|ENSG00000128512|chr7:111747332-111747332|G/-|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4', 'ENST00000476846.1_7:111503332-111846439:-|nuORF'] 137838 17429 YERWWYEKLIN True NCI_RA007_Epitope_Rep1 1598.7881632574597 1598.78706993586 71.929 2 -1.3994927460510387 0.40401538207469273 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 82514 13875 PPRQLLEDI True PC9_epitope_Rep5 1079.59750895347 1079.59640993586 58.39 2 -1.3995573979615024 0.40402241226776764 1.0 ['ENSG00000204616|ENST00000376734|TRIM31'] 72962 18831 MQELQKQAEL True NCI_RA007_Epitope_Rep5 1216.6121730414397 1216.61053490379 79.278 3 -1.3996250041684193 0.40402944229498916 1.0 ['nc|ENSG00000004838|O75800-2|ZMYND10', 'ENSG00000004838|ENST00000231749|ZMYND10'] 14840 16360 DVVKVLSKTTE True H1975_Epitope_Rep3 1217.68671788069 1217.68562993586 68.403 2 -1.3997086549557287 0.4040482678084858 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 2585 7370 AEQYQFLHHTL True NCI_RA007_Epitope_Rep1 1385.6727991520497 1385.67170993586 32.662 2 -1.3997907906752112 0.4040552973648824 1.0 ['nc|ENSG00000143851|P35236-3|PTPN7', 'ENSG00000143851|ENST00000691036|PTPN7', 'nc|ENSG00000143851|P35236-2|PTPN7'] 22546 4196 ETHSKLQNYME True H1975_Epitope_Rep3 1378.61871497386 1378.6176099358602 21.258 2 -1.3998761422079415 0.4040904426594954 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|47|2|sense'] 113318 11336 TLRKPKRVPSI True H1975_Epitope_Rep2 1293.8244891965298 1293.82285490379 48.654 3 -1.3998873678518313 0.4040904426594954 1.0 ['ENSG00000270765|ENST00000604641|GAS2L2'] 107125 6444 SVHTPPGPEAS True NCI_RA007_Epitope_Rep3 1077.5090878718897 1077.50798993586 32.365 2 -1.3999024380886627 0.4040904426594954 1.0 ['ENST00000476163.5_1_1:6947993-6948239:+|nuORF'] 127273 20331 VLYYKKIL True PC9_epitope_Rep2 1038.6477536211798 1038.64664993586 83.625 2 -1.3999106338160536 0.4040904426594954 1.0 ['nc|ENSG00000103599|Q86VS3-4|IQCH', 'nc|ENSG00000103599|Q86VS3-2|IQCH', 'ENSG00000103599|ENST00000335894|IQCH'] 120961 5113 VEPHSPSPSSK True H1975_Epitope_Rep3 1150.56185172074 1150.56074993586 24.778 2 -1.3999357109820387 0.4040904426594954 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 100137 8844 SISYPRKV True H1975_Epitope_Rep1 948.5392658013599 948.53816993586 38.94 2 -1.400060051018245 0.40411629415580586 1.0 ['nc|ENSG00000171931|Q5XX13-3|FBXW10', 'nc|ENSG00000171931|Q5XX13-4|FBXW10', 'ENSG00000171931|ENST00000395665|FBXW10', 'nc|ENSG00000171931|Q5XX13-2|FBXW10', 'FBXW10|p.K880Tfs*7|1|0.12|ENSG00000171931|chr17:18778776-18778777|GA/-|frameshift_variant'] 115957 23803 TSHQWPKQRE True H1975_Epitope_Rep2 1295.6370823496698 1295.63542490379 98.063 3 -1.4000788316243504 0.40411629415580586 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 104492 9604 SQLWFREFFL True NCI_RA007_Epitope_Rep1 1371.6975573479097 1371.69646993586 41.355 2 -1.4001897342065608 0.40418229424669166 1.0 ['nc|ENSG00000273749|Q7L576-2|CYFIP1', 'ENSG00000055163|ENST00000620254|CYFIP2', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENSG00000273749|ENST00000617928|CYFIP1'] 33630 8387 GLGIEYTFPP True H1975_Epitope_Rep3 1092.54916177872 1092.5480699358602 37.244 2 -1.4002746459681208 0.40419634853988773 1.0 ['ENSG00000116898|ENST00000373116|MRPS15', 'ENST00000477040.1_1_1:36921391-36921985:-|nuORF', 'ENST00000488606.5_1_1:36921391-36923601:-|nuORF'] 121082 6114 VERCHCKY True NCI_RA007_Epitope_Rep5 1036.45825568268 1036.4571499358601 30.197 2 -1.4002878605350346 0.40419634853988773 1.0 ['ENSG00000085741|ENST00000322563|WNT11'] 18055 18881 EIFPSRIL True PC9_epitope_Rep2 973.5596668927699 973.55856993586 77.991 2 -1.4003048007080503 0.4042008680064157 1.0 ['ENST00000555431.5_1_14:67817394-67826415:-|nuORF'] 127316 11592 VMEWFFVSLAR True NCI_RA007_Epitope_Rep2 1383.7009284761898 1383.6998299358602 49.68 2 -1.4003450517384768 0.4042008680064157 1.0 ['ENST00000532163.5_1_11:111945534-111946292:+|nuORF'] 66719 6925 LSLGLWWTFDR True H1975_Epitope_Rep1 1392.71902106848 1392.7173749037902 31.68 3 -1.4003491358560871 0.4042008680064157 1.0 ['ENST00000468307.1_1_7:155093355-155094128:+|nuORF', 'ENSG00000186480|ENST00000340368|INSIG1'] 127770 8976 VPDDFENR True H1975_Epitope_Rep3 990.4406739589 990.43956993586 39.521 2 -1.4003675473423178 0.4042008680064157 1.0 ['POLR3A|p.G812D|1|0.66|ENSG00000148606|chr10:78001019-78001019|C/T|missense_variant'] 136017 23271 WRAGSATT True H1975_Epitope_Rep2 848.41406528824 848.41296993586 95.98 2 -1.4003967068552454 0.404217180055663 1.0 ['ENST00000395066.7_1_15:74907619-74907901:+|nuORF'] 27144 20409 FLKLLKFV True PC9_epitope_Rep4 1006.65792438206 1006.65682993586 86.65 2 -1.400448649813868 0.404217180055663 1.0 ['ENST00000357033.8_1_X:33229490-33229556:-|nuORF'] 98543 19361 SFPARLAHRL True PC9_epitope_Rep5 1166.6672602791398 1166.6661699358601 79.519 2 -1.4005008531848604 0.404217180055663 1.0 ['ENST00000526693.5_1_11:834549-835112:+|nuORF'] 5789 9599 APDHQELN True NCI_RA007_Epitope_Rep1 922.4144592110599 922.41336993586 41.335 2 -1.4005046992303374 0.404217180055663 1.0 ['ENSG00000125730|ENST00000245907|C3'] 78034 9381 NVSVEIMVPNS True NCI_RA007_Epitope_Rep1 1187.58562394043 1187.58452993586 40.483 2 -1.4005658529921923 0.40423599891505596 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 58690 8734 LERPLVDLP True H1975_Epitope_Rep3 1050.60734536118 1050.6062499358602 38.599 2 -1.400663119079912 0.4042548173305974 1.0 ['ENSG00000157881|ENST00000378466|PANK4'] 118588 21223 TYRCIKQVH True NCI_RA007_Epitope_Rep3 1146.5967977608198 1146.59515490379 92.284 3 -1.4006777931382008 0.4042618427104093 1.0 ['ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3'] 122380 16692 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 69.34 2 -1.400744325372073 0.4042806603773585 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2'] 119982 7137 VDPVGNNY True NCI_RA007_Epitope_Rep5 876.39774651776 876.39664993586 34.129 2 -1.4007650539514533 0.4042876852867301 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.F2369L|1|0.05|ENSG00000042781|chr1:215965330-215965330|G/C|missense_variant'] 42096 21045 IDLGQTLAHRW True H1975_Epitope_Rep3 1308.6938689498 1308.69276993586 87.9 2 -1.40084408935918 0.40430173460844543 1.0 ['ENST00000473996.1_1_3:48454981-48455344:-|nuORF'] 44237 22326 IKMSLHSGLR True PC9_epitope_Rep4 1140.6437479532399 1140.6426499358602 94.115 2 -1.4008686544122855 0.40430173460844543 1.0 ['CACNG5|p.W59R|1|0.28|ENSG00000075429|chr17:66877507-66877507|T/A|missense_variant'] 21545 5954 ERNHWHYRDLE True H1975_Epitope_Rep3 1553.71237254825 1553.7112699358602 27.913 2 -1.4009044403131414 0.4043087590208009 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 31126 7854 GAVQLPQQ True PC9_epitope_Rep2 839.45011644379 839.44900993586 35.579 2 -1.4009555442561514 0.404315783267496 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant', 'NAV3|p.R1152Efs*27|1|0.47|ENSG00000067798|chr12:78119649-78119649|C/-|frameshift_variant', 'ENST00000550673.1_1_12:78401028-78404660:+|nuORF', 'NAV3|p.S830Vfs*12|1|0.34|ENSG00000067798|chr12:78051116-78051116|A/-|frameshift_variant'] 72019 5450 METDLEVRLR True H1975_Epitope_Rep2 1260.6496211793199 1260.64852993586 25.99 2 -1.4009771807933031 0.40432280734853665 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 91850 3417 RKKKQLMRLR True NCI_RA007_Epitope_Rep1 1355.8659771690297 1355.86432490379 17.19 3 -1.4010118347569143 0.40433911095389696 1.0 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF'] 66572 7432 LSIHYLMLP True PC9_epitope_Rep1 1085.59433814933 1085.59324993586 33.402 2 -1.4010367156647543 0.40433911095389696 1.0 ['ENSG00000196305|ENST00000443024|IARS1'] 66790 22909 LSLSLLTLLC True PC9_epitope_Rep5 1074.63586860814 1074.63527496793 93.112 1 -1.4010547345927185 0.40433911095389696 1.0 ['ENST00000306732.7_1_4:111543981-111544221:-|nuORF'] 16396 22541 EEIWKADRPGN True H1975_Epitope_Rep1 1313.6364136433297 1313.63530993586 93.758 2 -1.4011860187636789 0.40433911095389696 1.0 ['MAMDC2|p.L627Efs*3|1|0.07|ENSG00000165072|chr9:70218563-70218564|-/GAGGC|frameshift_variant', 'ENSG00000165072|ENST00000377182|MAMDC2'] 10966 11999 DAIRAHRAGRK True NCI_RA007_Epitope_Rep5 1249.7115847026096 1249.71048993586 52.815 2 -1.401245486233698 0.4043461343457806 1.0 ['ENST00000491136.6_1_1:52823963-52826194:-|nuORF', 'ENST00000460261.5_1_1:52822810-52825784:-|nuORF', 'nc|ENSG00000154222|Q5T0F9-3|CC2D1B', 'ENSG00000154222|ENST00000284376|CC2D1B', 'nc|ENSG00000154222|Q5T0F9|CC2D1B'] 132086 11036 VTTSPSVS True NCI_RA007_Epitope_Rep3 776.39159850816 776.39050993586 50.508 2 -1.4013039850308229 0.4043529009514602 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant'] 55123 17089 LAAAVPTAP True PC9_epitope_Rep3 809.4647038787699 809.46360993586 70.883 2 -1.4013527554258731 0.4043529009514602 1.0 ['ENST00000530694.5_1_11:12023362-12031257:-|nuORF', 'ENST00000533900.1_1_11:12023572-12030129:-|nuORF', 'ENST00000534479.5_1_11:12023699-12030797:-|nuORF', 'ENST00000526218.5_1_11:12000483-12031257:-|nuORF', 'ENSG00000050165|ENST00000683431|DKK3'] 88054 19324 QRQQLLVS True NCI_RA007_Epitope_Rep5 970.5559784946598 970.55488993586 81.205 2 -1.4013791479348072 0.4043529009514602 1.0 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 43312 21978 IFVKNFRNL True PC9_epitope_Rep5 1149.66586329681 1149.66476993586 89.569 2 -1.401379246905105 0.4043529009514602 1.0 ['SYTL5|p.C430F|1|0.06|ENSG00000147041|chrX:38106726-38106726|G/T|missense_variant'] 140075 16644 YQKYPVKY True PC9_epitope_Rep6 1087.5702315764697 1087.56912993586 76.487 2 -1.401448810219778 0.4043529009514602 1.0 ['ENSG00000179914|ENST00000326245|ITLN1', 'nc|ENSG00000158764|Q8WWU7-2|ITLN2', 'ENSG00000158764|ENST00000368029|ITLN2'] 32778 14750 GHFCLCPL True NCI_RA007_Epitope_Rep3 888.39861554824 888.39750993586 65.431 2 -1.4014760071984687 0.4043529009514602 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 137693 26437 YEKKLAKMC True PC9_epitope_Rep3 1112.5722228057598 1112.5711299358602 108.04 2 -1.4018220979654046 0.4044424532528473 1.0 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 4276 20278 AIGALGSIKAI True PC9_epitope_Rep2 1012.62808080576 1012.62698993586 83.421 2 -1.4019073030609333 0.40446126457515413 1.0 ['ENSG00000137992|ENST00000370132|DBT'] 122791 15511 VGGPNGGK True NCI_RA007_Epitope_Rep3 684.35548778296 684.35493496793 68.573 1 -1.4019717303815058 0.4045036547983966 1.0 ['ENSG00000111676|ENST00000396684|ATN1', 'ATN1|p.M371Hfs*9|1|0.25|ENSG00000111676|chr12:6936371-6936372|-/C|frameshift_variant'] 73115 20839 MRKWPRQYEWF True NCI_RA007_Epitope_Rep2 1625.79253744525 1625.79144993586 86.19 2 -1.4020917507869326 0.4045247161736793 1.0 ['ENSG00000175874|ENST00000324768|CREG2'] 66863 18047 LSNFIYFFE True PC9_epitope_Rep4 1178.56481184286 1178.56370993586 77.484 2 -1.4020973596363266 0.4045247161736793 1.0 ['ENST00000463943.1_1_20:49457191-49493142:+|nuORF'] 10203 21013 CARAPDGAG True H1975_Epitope_Rep2 816.3548361599599 816.35372993586 86.979 2 -1.402117656932085 0.4045247161736793 1.0 ['ENST00000575058.1_1_17:79660710-79662246:+|nuORF'] 5451 4169 ALVNINPFTPE True NCI_RA007_Epitope_Rep5 1213.63428838501 1213.63264490379 22.557 3 -1.402180004300867 0.4045317363010469 1.0 ['ENSG00000214102|ENST00000397541|WEE2'] 41717 13319 IAKVCARI True PC9_epitope_Rep5 872.5265929426798 872.52548993586 56.244 2 -1.4022810018057494 0.4045693537358829 1.0 ['ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 116678 20955 TVCDPVLGDK True NCI_RA007_Epitope_Rep5 1045.5113963710098 1045.51028993586 87.611 2 -1.4023160584751753 0.4045693537358829 1.0 ['nc|ENSG00000160209|O00764-2|PDXK'] 83914 17507 PVQCVPYLI True NCI_RA007_Epitope_Rep4 1030.55213898418 1030.5510499358602 75.789 2 -1.4024317696396105 0.4045881617881099 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 103038 16857 SPFSKTSI True PC9_epitope_Rep5 865.45453311789 865.4539849679301 69.851 1 -1.4024947925753513 0.40459266070186606 1.0 ['GATA3|p.R306Sfs*49|1|0.4|ENSG00000107485|chr10:8064134-8064134|G/-|frameshift_variant', 'nc|ENSG00000107485|P23771|GATA3', 'ENSG00000107485|ENST00000379328|GATA3'] 65733 19411 LSCPTCRLT True PC9_epitope_Rep1 992.47832242092 992.47722993586 79.474 2 -1.4024980711835504 0.40459266070186606 1.0 ['ENST00000361999.7_1_2:24438922-24439048:-|nuORF'] 118662 6092 TYSRNERWEY True H1975_Epitope_Rep3 1402.62657723562 1402.62548993586 28.445 2 -1.4025267420393455 0.40459266070186606 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 36745 6234 GVKGAKIK True PC9_epitope_Rep6 799.5279728416699 799.52686993586 32.461 2 -1.402533197243086 0.40459266070186606 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 13471 24181 DNGNTNAN True H1975_Epitope_Rep2 818.3154734457801 818.3149249679301 99.545 1 -1.402606345966495 0.40462325537533006 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 136549 8851 WWFSWRRRDFL True NCI_RA007_Epitope_Rep1 1653.8316998352896 1653.83005490379 38.429 3 -1.4026342724972278 0.404625503925313 1.0 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 61329 19340 LIRRKREEFIQ True NCI_RA007_Epitope_Rep2 1486.8732302940996 1486.8721299358601 80.131 2 -1.4026457257779454 0.404625503925313 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 139478 15587 YLRHFNELE True PC9_epitope_Rep1 1219.5985715826298 1219.59691490379 64.777 3 -1.4027128328551195 0.4046370183524087 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ATG9A|p.E349K|1|0.09|ENSG00000198925|chr2:219224326-219224326|C/T|missense_variant', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 3461 11319 AGLAVHRGGHF True PC9_epitope_Rep2 1120.58900995844 1120.5879099358601 48.861 2 -1.402724255176276 0.4046370183524087 1.0 ['ENSG00000112406|ENST00000367658|HECA'] 17728 16918 EHQKKVRKM True NCI_RA007_Epitope_Rep4 1182.6655460269797 1182.66391490379 73.306 3 -1.402765180972777 0.4046370183524087 1.0 ['EID3|p.R185Q|1|0.29|ENSG00000255150|chr12:104304488-104304488|G/A|missense_variant', 'ENSG00000255150|ENST00000527879|EID3'] 79892 23453 PENPPPVLMEP True NCI_RA007_Epitope_Rep4 1218.59546034814 1218.59380490379 101.78 3 -1.4028224453465958 0.4046370183524087 1.0 ['ENSG00000137310|ENST00000376257|TCF19'] 111365 23875 THRIPVVR True NCI_RA007_Epitope_Rep4 976.59303270972 976.5924849679301 103.56 1 -1.4028957258259336 0.4046370183524087 1.0 ['ENST00000544562.5_1_14:23067206-23078652:+|nuORF'] 126100 10929 VLEPQAVP True PC9_epitope_Rep3 851.4752685624699 851.47416993586 47.018 2 -1.402957573270298 0.40466760961810466 1.0 ['ENSG00000186166|ENST00000334418|CENATAC'] 83101 6296 PSPGLKQS True NCI_RA007_Epitope_Rep4 812.4392174069201 812.43812993586 30.822 2 -1.4030534737374856 0.40469820016265723 1.0 ['ENST00000468308.1_1_2:172378863-172407640:+|nuORF'] 66146 14170 LSENQHKKR True PC9_epitope_Rep4 1138.62070400954 1138.6196099358601 62.409 2 -1.4033621082722891 0.40475460845787564 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 88233 8482 QSDKLKPWRDY True H1975_Epitope_Rep3 1434.7255630009 1434.72446993586 37.611 2 -1.4033752763829332 0.40475460845787564 1.0 ['ENST00000449949.5_1_21:43414155-43429688:-|nuORF'] 8566 5656 ATVMDKTRAL True NCI_RA007_Epitope_Rep4 1104.59612905448 1104.59502993586 28.362 2 -1.403391226174578 0.40475460845787564 1.0 ['CASP1|p.E241Kfs*25|1|0.08|ENSG00000137752|chr11:105029806-105029806|C/-|frameshift_variant', 'nc|ENSG00000137752|P29466-2|CASP1', 'ENSG00000137752|ENST00000533400|CASP1', 'ENST00000526511.5_1_11:104901858-104905840:-|nuORF', 'ENST00000527065.1_1_11:104915107-104915377:-|nuORF', 'ENSG00000204397|ENST00000673097|CARD16', 'nc|ENSG00000204397|Q5EG05|CARD16'] 122647 8677 VGGAGTSAR True H1975_Epitope_Rep3 774.3984152241 774.3978649679301 38.375 1 -1.4034084799971729 0.4047568535935695 1.0 ['LOXHD1|p.V369Gfs*33|1|0.54|ENSG00000167210|chr18:46529270-46529271|-/T|frameshift_variant', 'ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 72604 22739 MLTLVFLVL True PC9_epitope_Rep5 1047.64022571259 1047.6391299358602 92.47 2 -1.4034297226325823 0.4047568535935695 1.0 ['ENSG00000184349|ENST00000333274|EFNA5', 'ENST00000504941.1_1_5:106762801-107006392:-|nuORF'] 46154 9403 ISLGPGDRDV True NCI_RA007_Epitope_Rep5 1027.52982331647 1027.5287299358602 42.808 2 -1.4034502166712552 0.40475881819146053 1.0 ['nc|ENSG00000158714|Q9P0V8-2|SLAMF8', 'ENSG00000158714|ENST00000289707|SLAMF8'] 74582 4146 NGENLSFAYEF True NCI_RA007_Epitope_Rep2 1289.5564319871298 1289.55532993586 20.766 2 -1.4035064777029733 0.40475881819146053 1.0 ['nc|ENSG00000102802|Q5VYS4-2|MEDAG', 'ENSG00000102802|ENST00000380482|MEDAG'] 38722 17718 HGGEGDSC True PC9_epitope_Rep6 760.2446170046401 760.24350993586 80.786 2 -1.4035381194592378 0.40475881819146053 1.0 ['nc|ENSG00000153094|O43521-11|BCL2L11', 'nc|ENSG00000153094|O43521-10|BCL2L11', 'nc|ENSG00000153094|O43521-14|BCL2L11', 'nc|ENSG00000153094|O43521-19|BCL2L11', 'nc|ENSG00000153094|O43521-4|BCL2L11', 'nc|ENSG00000153094|O43521-8|BCL2L11', 'ENSG00000153094|ENST00000393256|BCL2L11'] 138638 13902 YIFRTFFKIMF True PC9_epitope_Rep1 1511.7999142414699 1511.7988099358602 58.311 2 -1.4035480580385975 0.40475881819146053 1.0 ['nc|ENSG00000182077|Q3KNS1|PTCHD3'] 31742 10309 GEGTVVVSYGV True H1975_Epitope_Rep1 1065.5342399905699 1065.53367496793 44.598 1 -1.403599499111769 0.40475881819146053 1.0 ['ENSG00000125863|ENST00000347364|MKKS'] 20207 11508 ENKEFKIHL True NCI_RA007_Epitope_Rep1 1156.6240580544797 1156.62296993586 48.73 2 -1.4036184556479343 0.40475881819146053 1.0 ['ENSG00000221886|ENST00000408953|FAM200C'] 60024 5760 LGKLEDSK True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 29.637 2 -1.403629284804438 0.40475881819146053 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'nc|ENSG00000168916|Q9ULD9-2|ZNF608'] 98538 10754 SFNRSSNLI True PC9_epitope_Rep4 1036.53015766964 1036.5290699358602 49.122 2 -1.403675946065984 0.4047658330779928 1.0 ['ENSG00000128000|ENST00000434248|ZNF780B'] 112745 17957 TLHHLALI True PC9_epitope_Rep1 916.54943656224 916.54832993586 73.862 2 -1.403729909876896 0.4047680776845479 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 45431 24396 IQHQRIHFG True PC9_epitope_Rep4 1134.6046600225798 1134.60301490379 102.32 3 -1.4037384183356858 0.4047680776845479 1.0 ['nc|ENSG00000185869|Q3KNS6-3|ZNF829', 'ENSG00000185869|ENST00000391711|ZNF829'] 64191 11445 LPGIHVSA True PC9_epitope_Rep3 792.4493881678 792.44828993586 49.022 2 -1.4037716339969533 0.4047868767455837 1.0 ['ENSG00000090924|ENST00000425673|PLEKHG2', 'nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'PLEKHG2|p.P1069Lfs*136|1|0.2|ENSG00000090924|chr19:39424337-39424337|C/-|frameshift_variant'] 105363 16741 SRRKRAKVEYR True NCI_RA007_Epitope_Rep1 1447.8484125285897 1447.84730993586 69.244 2 -1.4038372595514528 0.4048056753635485 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 22657 6475 ETPQTVPA True PC9_epitope_Rep1 841.4181476091699 841.4175949679301 29.712 1 -1.4039153206700148 0.4048244735384579 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 44943 19482 INWLWLGWTV True PC9_epitope_Rep4 1286.6811790077797 1286.68008993586 83.054 2 -1.4039394854911293 0.40483148715531464 1.0 ['ENST00000560170.1_1_15:96828545-96870526:-|nuORF', 'ENST00000502125.6_1_15:96826128-96870526:-|nuORF', 'ENST00000560010.1_1_15:96833853-96870526:-|nuORF'] 3560 16811 AGLVISPLW True PC9_epitope_Rep1 954.5538532363399 954.55274993586 69.489 2 -1.4039745422307128 0.4048337300558554 1.0 ['ENSG00000151665|ENST00000281382|PIGF'] 2786 5141 AETWDFFF True PC9_epitope_Rep3 1061.4494477374499 1061.44834993586 24.861 2 -1.403976104483799 0.4048337300558554 1.0 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000432916.5_1_22:45122508-45132738:+|nuORF', 'nc|ENSG00000186654|P85299-2|PRR5', 'nc|ENSG00000186654|P85299-4|PRR5', 'ENST00000455389.3_1_22:45126703-45133124:+|nuORF', 'ENST00000495017.5_1_22:45127230-45133124:+|nuORF'] 100332 22776 SKKTKKRPP True H1975_Epitope_Rep2 1068.6767623336798 1068.67566993586 94.046 2 -1.4040394064419672 0.4048665527602663 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P'] 127190 6558 VLVMFGIV True H1975_Epitope_Rep3 876.5142969234798 876.5131899358599 30.184 2 -1.4040422209464816 0.4048665527602663 1.0 ['ENSG00000116329|ENST00000234961|OPRD1'] 12295 14657 DINEAGVRVL True PC9_epitope_Rep2 1084.58767254576 1084.58656993586 61.644 2 -1.4040485294091996 0.4048665527602663 1.0 ['ENST00000525522.5_1_11:494693-499199:-|nuORF', 'ENST00000525701.5_1_11:494693-500690:-|nuORF', 'ENSG00000023191|ENST00000354420|RNH1'] 136925 12443 YAGEVQYDVR True PC9_epitope_Rep5 1198.56185172074 1198.56074993586 52.863 2 -1.4040682734922099 0.4048687947022989 1.0 ['ENSG00000145555|ENST00000513610|MYO10'] 33568 6483 GLESQRALSP True H1975_Epitope_Rep2 1056.55637241748 1056.55526993586 29.853 2 -1.4041704987799786 0.4048687947022989 1.0 ['ENSG00000121068|ENST00000240328|TBX2', 'ENST00000477081.1_1_17:59485297-59485864:+|nuORF'] 95525 20734 RWRLPLTCLLL True H1975_Epitope_Rep2 1382.82204666838 1382.8204049037902 85.858 3 -1.4043095289199568 0.4048875901399821 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 45705 12254 IRNQLRYRQRR True NCI_RA007_Epitope_Rep1 1557.9076587402099 1557.90601490379 51.636 3 -1.4043744010049592 0.40489460226937984 1.0 ['IQGAP1|p.R1493L|1|0.34|ENSG00000140575|chr15:90492561-90492561|G/T|missense_variant'] 140531 18440 YRNQHKEYFDY True H1975_Epitope_Rep3 1561.69499114861 1561.6938899358602 77.309 2 -1.4044372466671737 0.40490862603244926 1.0 ['ENST00000472199.1_1_10:60996338-60998466:+|nuORF', 'PHYHIPL|p.V198Ffs*28|1|0.27|ENSG00000165443|chr10:59238701-59238701|G/-|frameshift_variant', 'ENST00000486074.2_1_10:60966594-61005348:+|nuORF', 'nc|ENSG00000165443|Q96FC7-2|PHYHIPL', 'ENSG00000165443|ENST00000373880|PHYHIPL'] 84117 15714 PWTQLAQPL True PC9_epitope_Rep6 1052.5654805491997 1052.5643899358602 72.662 2 -1.404497073083189 0.40490862603244926 1.0 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 89749 24836 RAFQGPQGFAV True H1975_Epitope_Rep2 1176.60399131624 1176.60235490379 102.1 3 -1.404568347591255 0.40491086682454963 1.0 ['SUN2|p.W602R|1|0.25|ENSG00000100242|chr22:38738730-38738730|A/T|missense_variant'] 86702 9534 QLKELHPLHR True PC9_epitope_Rep5 1269.73058881169 1269.72895490379 41.631 3 -1.404589034864442 0.40491086682454963 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 45941 16809 ISEKKYRQP True PC9_epitope_Rep1 1147.6349570913499 1147.63386993586 69.481 2 -1.404682607927131 0.40492488954344624 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant'] 124353 18946 VGTTWIFGVLH True PC9_epitope_Rep5 1228.6604435632 1228.65880490379 77.899 3 -1.4046890266767824 0.40492488954344624 1.0 ['ADGRL4|p.L627V|1|0.14|ENSG00000162618|chr1:78891655-78891655|G/C|missense_variant'] 125654 25128 VKLGPALK True NCI_RA007_Epitope_Rep2 824.5483739330799 824.5478249679301 105.82 1 -1.4047611593239098 0.4049319006550733 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 72124 18997 MFLTRALEKIL True NCI_RA007_Epitope_Rep3 1333.7791787968897 1333.7780899358602 83.006 2 -1.404924768117305 0.4050213838849158 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 34475 4748 GPLEHVVLGNA True NCI_RA007_Epitope_Rep1 1104.5927579262 1104.5916699358602 22.549 2 -1.4049693123972766 0.4050283936944791 1.0 ['ENST00000416600.6_1_20:3846990-3847266:+|nuORF'] 33147 3463 GITGMHHH True NCI_RA007_Epitope_Rep4 888.4024550587201 888.40134993586 19.255 2 -1.4049970167206773 0.4050325727143143 1.0 ['ENST00000514736.1_1_4:178824969-178828914:-|nuORF'] 66901 18944 LSNLQRTKRQP True PC9_epitope_Rep2 1339.76843087239 1339.76732993586 78.233 2 -1.4050157579335496 0.4050325727143143 1.0 ['ENST00000541377.5_1_2:122363504-122363705:-|nuORF'] 61676 8021 LKTGWESCL True NCI_RA007_Epitope_Rep2 1035.5059170677498 1035.50480993586 35.831 2 -1.4050560943798902 0.4050325727143143 1.0 ['ENST00000517719.5_1_8:37963213-37963649:+|nuORF', 'ENST00000428278.6_2_8:37963460-37963649:+|nuORF'] 62487 23442 LLIIDLLLCI True PC9_epitope_Rep2 1140.71920430928 1140.71755490379 95.641 3 -1.4050780042056843 0.4050325727143143 1.0 ['ENST00000323571.8_1_17:38437179-38437275:+|nuORF'] 34205 24493 GNIRRARKRKY True PC9_epitope_Rep4 1416.8538322621998 1416.85272993586 102.7 2 -1.4051378069961278 0.4050325727143143 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 63103 19224 LLQTCTPPPF True PC9_epitope_Rep2 1115.5685173243098 1115.56740993586 79.317 2 -1.4051383153319004 0.4050325727143143 1.0 ['ENST00000342665.4_2_20:307553-308057:+|nuORF'] 16939 7391 EFRQYKRTYYM True NCI_RA007_Epitope_Rep3 1583.7554832301898 1583.7538349037902 36.199 3 -1.4051668078554593 0.4050325727143143 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 117011 6651 TVHILETYEGW True PC9_epitope_Rep5 1346.6506667251401 1346.64901490379 30.555 3 -1.4052762782672765 0.4050325727143143 1.0 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 128897 16257 VQFKSRKER True NCI_RA007_Epitope_Rep3 1176.6727395823998 1176.6716499358602 71.633 2 -1.4052815688688955 0.4050325727143143 1.0 ['PABPC3|p.G171V|1|0.13|ENSG00000151846|chr13:25096710-25096710|G/T|missense_variant'] 57789 8327 LEERMKST True PC9_epitope_Rep5 992.49608066004 992.49498993586 36.97 2 -1.4054420192069046 0.40503481016386106 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN'] 70879 8910 LYEEFWIKYAK True H1975_Epitope_Rep3 1488.7653025545599 1488.7642099358602 39.271 2 -1.4055062915057006 0.40503481016386106 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 84548 5965 QARRHHQF True PC9_epitope_Rep6 1078.55329315606 1078.55218993586 31.251 2 -1.4056263520925647 0.4050510642809183 1.0 ['ENST00000568495.5_1_16:67862172-67864127:-|nuORF', 'ENST00000436104.6_1_16:67862410-67864187:-|nuORF', 'ENST00000569862.5_1_16:67862172-67864187:-|nuORF', 'ENST00000562513.6_1_16:67862078-67865741:-|nuORF', 'ENSG00000102901|ENST00000562787|CENPT'] 121932 14462 VFSFRCEV True PC9_epitope_Rep5 985.4691376362098 985.46804993586 60.628 2 -1.4056474103137249 0.4050510642809183 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF'] 40446 19547 HRARMIEYF True PC9_epitope_Rep6 1221.6076967976899 1221.60658993586 87.851 2 -1.4056509022848205 0.4050510642809183 1.0 ['nc|ENSG00000138670|Q0VAM2-2|RASGEF1B', 'nc|ENSG00000138670|Q0VAM2-3|RASGEF1B', 'ENSG00000138670|ENST00000264400|RASGEF1B'] 71093 15370 LYLGPSGPTR True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 64.277 2 -1.4056520889541306 0.4050510642809183 1.0 ['ENSG00000189114|ENST00000433642|BLOC1S3'] 49733 25148 KGRFLLLM True PC9_epitope_Rep2 976.5891931992398 976.58808993586 102.4 2 -1.4059346460346882 0.40508863890688496 1.0 ['ENST00000567744.5_1_15:65891231-65891273:-|nuORF'] 58159 6639 LEKRNSDL True PC9_epitope_Rep1 973.51925863277 973.51816993586 30.342 2 -1.405967618975792 0.40508863890688496 1.0 ['nc|ENSG00000166734|Q6P4E1-2|GOLM2', 'nc|ENSG00000166734|Q6P4E1-5|GOLM2', 'ENSG00000166734|ENST00000299957|GOLM2', 'ENST00000558735.1_1_15:44581347-44620963:+|nuORF', 'ENST00000429162.2_1_15:44581227-44599615:+|nuORF', 'nc|ENSG00000166734|Q6P4E1-3|GOLM2'] 113437 11860 TLSNLLRSV True PC9_epitope_Rep2 1001.58694426977 1001.58584993586 50.946 2 -1.4060328058748885 0.40510265380402133 1.0 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 12377 10022 DISKQLHAYEV True PC9_epitope_Rep4 1301.66156576201 1301.6604699358602 46.212 2 -1.4060434586206432 0.40510265380402133 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 21840 6550 ESASPPPK True PC9_epitope_Rep6 811.40758292547 811.40648993586 33.876 2 -1.406334134270373 0.405170789163722 1.0 ['nc|ENSG00000138182|Q96Q89-4|KIF20B'] 57744 17131 LEENLCYRDF True PC9_epitope_Rep1 1300.5757875327197 1300.57468993586 70.719 2 -1.4063511817326961 0.405170789163722 1.0 ['ENSG00000135951|ENST00000393483|TSGA10'] 94389 20591 RRRRGAGA True PC9_epitope_Rep6 898.5321637886598 898.53106993586 91.932 2 -1.406366953775258 0.405170789163722 1.0 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 80673 8596 PGTRSFGPAP True PC9_epitope_Rep2 985.4981292653698 985.49702993586 38.426 2 -1.4064031285426535 0.40517302301477 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B'] 121879 15717 VFPGFAYDSV True PC9_epitope_Rep4 1100.51786165044 1100.51676993586 68.381 2 -1.4064498095719637 0.40517302301477 1.0 ['NF1|p.N1673S|1|0.25|ENSG00000196712|chr17:31326002-31326002|A/G|missense_variant'] 98568 7961 SFRDREPHDY True NCI_RA007_Epitope_Rep3 1320.58471242364 1320.58360993586 38.419 2 -1.4064868029680024 0.4051800289742412 1.0 ['nc|ENSG00000158321|Q8WXX7-2|AUTS2', 'AUTS2|p.G1229Afs*16|1|0.19|ENSG00000158321|chr7:70790897-70790897|G/-|frameshift_variant', 'ENSG00000158321|ENST00000342771|AUTS2', 'nc|ENSG00000158321|Q8WXX7-5|AUTS2'] 39281 22206 HIMKYKKK True PC9_epitope_Rep4 1074.6372060208198 1074.63667496793 93.659 1 -1.406549580408365 0.40521059078488647 1.0 ['nc|ENSG00000056736|Q9NRM6-2|IL17RB', 'ENST00000475124.1_1_3:53880615-53891834:+|nuORF', 'ENSG00000056736|ENST00000288167|IL17RB'] 117820 18211 TVWVRLLCPV True NCI_RA007_Epitope_Rep3 1184.67398545236 1184.67347496793 79.751 1 -1.4066336464003573 0.40522460132381694 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 125651 25314 VKLGPALK True H1975_Epitope_Rep3 824.5483739330799 824.5478249679301 105.3 1 -1.4066522578801692 0.40522460132381694 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 89937 14326 RCWWRWPRCYW True NCI_RA007_Epitope_Rep5 1696.7656115047598 1696.7645099358601 61.796 2 -1.4067246765716352 0.40523861120271354 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 67902 17228 LTCHSTGIPAP True NCI_RA007_Epitope_Rep3 1095.5382798251899 1095.5371899358602 75.662 2 -1.4067448076124955 0.40523861120271354 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 124158 6853 VGSSRSLVFL True NCI_RA007_Epitope_Rep4 1063.60259433391 1063.6014899358602 32.981 2 -1.406761171295316 0.4052456158946637 1.0 ['ENST00000429967.2_1_X:128781414-128781876:-|nuORF'] 47816 19420 IYGLFGAFAI True PC9_epitope_Rep1 1070.58006798418 1070.5789699358602 79.511 2 -1.4068725543533729 0.40525485208215567 1.0 ['OR52A5|p.V205G|1|0.13|ENSG00000171944|chr11:5132029-5132029|A/C|missense_variant'] 15590 10803 EAQVELLLHRQ True H1975_Epitope_Rep3 1334.73064838134 1334.7295499358602 46.633 2 -1.406874806624821 0.40525485208215567 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 36563 9874 GVHAGLRAP True H1975_Epitope_Rep2 876.49298431528 876.49188993586 42.968 2 -1.406876246179003 0.40525485208215567 1.0 ['ENST00000366971.8_1_1:213032234-213037122:+|nuORF'] 125544 4685 VKIPQQAE True PC9_epitope_Rep4 911.5076313199099 911.50652993586 24.557 2 -1.4069493662710375 0.40529718653209756 1.0 ['ENSG00000140854|ENST00000379661|KATNB1', 'ENST00000566611.5_1_16:57786940-57790081:+|nuORF', 'ENST00000569018.5_1_16:57789126-57789830:+|nuORF'] 78917 7782 PAGPGIPDL True PC9_epitope_Rep5 835.44396843419 835.44286993586 34.878 2 -1.4070713209144667 0.4053299731499364 1.0 ['ENST00000232974.10_1_3:42706713-42706947:+|nuORF'] 6578 5231 APVHAALVH True NCI_RA007_Epitope_Rep3 913.5133854066901 913.5122899358599 27.581 2 -1.407095102104429 0.4053299731499364 1.0 ['ENST00000294360.4_1_1:53680060-53680234:-|nuORF'] 114296 14915 TPPVRGRA True NCI_RA007_Epitope_Rep5 852.4929843152798 852.49188993586 64.038 2 -1.40709713043238 0.4053299731499364 1.0 ['nc|ENSG00000134222|Q6PGN9-4|PSRC1', 'nc|ENSG00000134222|Q6PGN9-3|PSRC1', 'ENST00000492431.1_1_1:109822777-109824720:-|nuORF', 'ENSG00000134222|ENST00000369909|PSRC1', 'nc|ENSG00000134222|Q6PGN9|PSRC1'] 139574 9144 YLVPLFIGD True NCI_RA007_Epitope_Rep4 1035.5640835668698 1035.56298993586 42.013 2 -1.407126267958251 0.4053322028309663 1.0 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26'] 80014 10290 PFEQDEEILR True PC9_epitope_Rep1 1274.6142812164198 1274.6131899358602 44.465 2 -1.4071279110930488 0.4053322028309663 1.0 ['ENSG00000198355|ENST00000360612|PIM3'] 20707 9325 EQEKEPVS True H1975_Epitope_Rep2 944.4450906329998 944.44454496793 40.83 1 -1.4073639097656452 0.4053458934353842 1.0 ['nc|ENSG00000290618|P0DPF6|CDRT15P3'] 23510 20231 EVVHSNNM True NCI_RA007_Epitope_Rep5 928.40726565564 928.40616993586 84.759 2 -1.4073663113862365 0.4053458934353842 1.0 ['ENST00000271469.7_2_1:162569461-162569569:+|nuORF'] 78918 16817 PAGPGLAPKRP True PC9_epitope_Rep3 1059.61891310439 1059.6178099358601 69.838 2 -1.4074208944371354 0.4053458934353842 1.0 ['ENSG00000148411|ENST00000277554|NACC2'] 22639 13553 ETNKQPGLKP True H1975_Epitope_Rep3 1110.6033226098998 1110.6022299358601 57.414 2 -1.4074291555110578 0.4053458934353842 1.0 ['ENSG00000188352|ENST00000338382|FOCAD', 'ENST00000603552.1_1_9:20881907-20885147:+|nuORF'] 136161 18015 WRRQRDLRRAL True NCI_RA007_Epitope_Rep1 1524.88619501964 1524.8850899358602 74.213 2 -1.407434442736655 0.4053458934353842 1.0 ['ENSG00000128408|ENST00000614167|RIBC2'] 113656 20123 TLWAWLPG True NCI_RA007_Epitope_Rep5 942.4963383602199 942.49524993586 84.347 2 -1.4074838449284968 0.4053458934353842 1.0 ['ENST00000551018.5_1_12:53693125-53693203:+|nuORF'] 123978 18603 VGSARALR True PC9_epitope_Rep3 828.49298431528 828.49188993586 76.779 2 -1.4074889324934394 0.4053458934353842 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 122796 20064 VGGPNGGK True PC9_epitope_Rep6 684.35548778296 684.35493496793 89.843 1 -1.4075345402333053 0.4053764453759744 1.0 ['ENSG00000111676|ENST00000396684|ATN1', 'ATN1|p.M371Hfs*9|1|0.25|ENSG00000111676|chr12:6936371-6936372|-/C|frameshift_variant'] 101244 9372 SLHRQLSDP True H1975_Epitope_Rep1 1051.5410567065098 1051.53994993586 40.959 2 -1.4075836906433812 0.40537867370007535 1.0 ['ENSG00000125998|ENST00000374408|FAM83C', 'FAM83C|p.N530Qfs*40|1|0.45|ENSG00000125998|chr20:35287191-35287192|-/G|frameshift_variant', 'FAM83C|p.Q391E|1|0.14|ENSG00000125998|chr20:35287608-35287608|G/C|missense_variant'] 61313 8914 LIRCFKDFQL True H1975_Epitope_Rep1 1281.6903637924897 1281.68926993586 39.191 2 -1.407599127949651 0.40537867370007535 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000580395.1_1_17:26945751-26946955:-|nuORF'] 46997 9236 ITQLKIENN True H1975_Epitope_Rep1 1071.59242357303 1071.5913299358601 40.436 2 -1.40768114306134 0.40541081456540423 1.0 ['nc|ENSG00000089225|Q99593-2|TBX5', 'nc|ENSG00000089225|Q99593-3|TBX5', 'ENSG00000089225|ENST00000405440|TBX5', 'TBX5|p.P231H|1|0.68|ENSG00000089225|chr12:114385539-114385539|G/T|missense_variant', 'nc|ENSG00000121075|P57082|TBX4', 'ENSG00000121075|ENST00000644296|TBX4'] 136043 20409 WREFPDRLVGY True H1975_Epitope_Rep1 1436.72008369764 1436.71898993586 84.88 2 -1.4077576621941659 0.40541081456540423 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 42097 6855 IDLHYYAQ True PC9_epitope_Rep1 1021.48689587533 1021.48578993586 31.172 2 -1.4077804760292962 0.40541081456540423 1.0 ['ENST00000449421.6_1_17:73205928-73222855:+|nuORF', 'ENST00000583948.5_1_17:73201841-73222120:+|nuORF', 'nc|ENSG00000125450|Q9BW27-3|NUP85', 'ENSG00000125450|ENST00000245544|NUP85', 'ENST00000577561.1_1_17:73214398-73221993:+|nuORF', 'nc|ENSG00000125450|Q9BW27-2|NUP85', 'ENST00000581104.5_1_17:73208151-73231006:+|nuORF'] 104866 20973 SRARRRSV True PC9_epitope_Rep6 986.5845932843399 986.58348993586 93.468 2 -1.407846238907284 0.40541081456540423 1.0 ['ENST00000261776.9_1_16:70834832-70834985:-|nuORF'] 57158 12031 LDTRIHLGPV True PC9_epitope_Rep1 1119.64004247179 1119.6389499358602 51.138 2 -1.407854495437351 0.40541081456540423 1.0 ['ENST00000589881.5_1_18:32920403-32920517:-|nuORF'] 23122 15254 EVIYTLLGLM True PC9_epitope_Rep5 1150.6307832276998 1150.6296899358601 63.684 2 -1.4078802983607859 0.40541081456540423 1.0 ['TTC12|p.N637Kfs*22|1|0.06|ENSG00000149292|chr11:113364926-113364927|-/A|frameshift_variant', 'ENSG00000149292|ENST00000529221|TTC12', 'nc|ENSG00000149292|Q9H892-2|TTC12'] 113230 17120 TLQPAWPAA True PC9_epitope_Rep1 953.4970666362099 953.49596993586 70.676 2 -1.4079041783565822 0.40541081456540423 1.0 ['ENST00000564946.5_1_16:30663032-30664184:+|nuORF'] 86699 18281 QLKALCEKHGD True PC9_epitope_Rep4 1240.62340643148 1240.6217549037901 78.388 3 -1.4079274455849702 0.40541081456540423 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 17821 7804 EHTDPQPSNKP True H1975_Epitope_Rep1 1248.5734790336 1248.57184490379 34.972 3 -1.4079915546911619 0.40541081456540423 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 15011 15962 DYKGDATVFF True PC9_epitope_Rep5 1161.5342399905699 1161.5331499358601 66.387 2 -1.4080864167941667 0.40541081456540423 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 98630 19632 SFWPKDRVM True PC9_epitope_Rep1 1164.5749996870798 1164.57390993586 80.34 2 -1.4081088856940713 0.40541081456540423 1.0 ['ENSG00000171316|ENST00000423902|CHD7'] 81190 17151 PKGPCGRK True H1975_Epitope_Rep1 841.4592416588499 841.45869496793 71.42 1 -1.4081183423046044 0.40541081456540423 1.0 ['ENST00000593717.1_17:7517322-7517418:+|nuORF'] 18681 17597 ELAFLEAARQ True PC9_epitope_Rep2 1146.6033226098998 1146.6022299358601 72.965 2 -1.4081315628895514 0.40541081456540423 1.0 ['nc|ENSG00000185813|Q99447-2|PCYT2', 'nc|ENSG00000185813|Q99447-4|PCYT2', 'ENSG00000185813|ENST00000538936|PCYT2', 'nc|ENSG00000185813|Q99447-3|PCYT2', 'ENST00000574343.5_1_17:79862711-79863545:-|nuORF'] 64477 19729 LPQESPRQWF True PC9_epitope_Rep5 1286.64077074778 1286.6396699358602 80.934 2 -1.408175951554393 0.4054178145087236 1.0 ['ENST00000078429.8_1_19:3123337-3123766:+|nuORF'] 23514 5168 EVVKSARHMNI True NCI_RA007_Epitope_Rep2 1282.6815900139397 1282.67995490379 24.723 3 -1.4081957045645557 0.40542004143906574 1.0 ['HMGCLL1|p.P256Cfs*16|1|0.08|ENSG00000146151|chr6:55495510-55495538|CTTTCCAACATTCTTTTCATACTTCCTGG/-|frameshift_variant', 'nc|ENSG00000146151|Q8TB92-5|HMGCLL1', 'ENSG00000146151|ENST00000274901|HMGCLL1', 'nc|ENSG00000146151|Q8TB92|HMGCLL1'] 34274 21112 GNTLTSLK True PC9_epitope_Rep4 832.46543215476 832.46432993586 89.369 2 -1.408206509236945 0.40542004143906574 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 126598 13150 VLLYWMHI True PC9_epitope_Rep2 1073.57320878193 1073.57210993586 55.852 2 -1.4082759937479097 0.4054388133498146 1.0 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|57', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|57'] 20209 16369 ENKHKKDEEK True PC9_epitope_Rep6 1283.6469783270297 1283.64532490379 75.348 3 -1.4084526596557825 0.40546458379931016 1.0 ['ENSG00000162434|ENST00000342505|JAK1', 'JAK1|p.M991Wfs*27|1|0.36|ENSG00000162434|chr1:64838101-64838101|T/-|frameshift_variant'] 120513 11770 VEFHRQSPAK True NCI_RA007_Epitope_Rep3 1197.62545503681 1197.62487496793 53.408 1 -1.4084844793697886 0.40546458379931016 1.0 ['ENSG00000077943|ENST00000378076|ITGA8'] 31956 8282 GEPANPVD True PC9_epitope_Rep2 797.35554735261 797.35444993586 37.217 2 -1.4085677562828274 0.40546680949746317 1.0 ['ENSG00000112983|ENST00000254900|BRD8'] 18798 6869 ELDFYVKGMPI True H1975_Epitope_Rep3 1310.6580606046998 1310.6569699358602 31.381 2 -1.408643219742351 0.40546680949746317 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 36399 12583 GVFLPAGI True NCI_RA007_Epitope_Rep5 772.4483255386399 772.44722993586 55.054 2 -1.4086987169079446 0.40548557975279576 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 45893 8003 ISDVNKNGSI True PC9_epitope_Rep1 1045.54038800017 1045.53928993586 35.604 2 -1.4087087861166916 0.4054878048780488 1.0 ['ENSG00000160908|ENST00000337673|ZNF394'] 36715 18091 GVIYLEMDLI True PC9_epitope_Rep1 1164.6100477831199 1164.60841490379 74.381 3 -1.4087375287028434 0.4054878048780488 1.0 ['nc|ENSG00000140563|Q6DN12-2|MCTP2', 'ENSG00000140563|ENST00000357742|MCTP2', 'ENST00000456504.5_1_15:94858078-95022260:+|nuORF', 'nc|ENSG00000140563|Q6DN12-4|MCTP2', 'nc|ENSG00000140563|Q6DN12-3|MCTP2'] 56262 5463 LCVLISKQA True PC9_epitope_Rep6 973.5630380210499 973.56194993586 28.952 2 -1.4089466489838258 0.40550625014713154 1.0 ['ENST00000435306.1_1_X:102942274-102942946:+|nuORF'] 66034 13209 LSEFEEGSYGW True H1975_Epitope_Rep2 1302.54044756982 1302.5393499358602 55.936 2 -1.4090022063781722 0.40550625014713154 1.0 ['ENSG00000173930|ENST00000310954|SLCO4C1'] 121729 23999 VFLKYKRQV True PC9_epitope_Rep2 1179.7128134892298 1179.7111649037902 97.807 3 -1.4090124696030923 0.40550625014713154 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 126552 9618 VLLPESNV True PC9_epitope_Rep2 869.48583324617 869.48472993586 42.337 2 -1.4090130516917367 0.40550625014713154 1.0 ['ENST00000377671.7_1_20:18269181-18279006:+|nuORF'] 125244 21305 VIKTPVVK True H1975_Epitope_Rep2 882.5902387450599 882.58914993586 88.162 2 -1.4090459404947877 0.40550625014713154 1.0 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 47335 20326 IVFKHFKRNK True PC9_epitope_Rep3 1315.7877097649896 1315.78660993586 83.434 2 -1.4090737746239974 0.40550625014713154 1.0 ['nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100'] 140036 9745 YQEYLKQVP True NCI_RA007_Epitope_Rep2 1166.5971746003 1166.5960699358602 42.527 2 -1.409148998060182 0.4055084745762712 1.0 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6'] 8509 4940 ATSPRAPAP True H1975_Epitope_Rep2 866.4610154806599 866.45990993586 24.085 2 -1.4091495731740853 0.4055084745762712 1.0 ['ENST00000589123.5_2_19:3463128-3463455:+|nuORF'] 129184 14835 VQSLNQTYK True PC9_epitope_Rep5 1079.56112344475 1079.56002993586 62.065 2 -1.4091739934255167 0.40551069890068503 1.0 ['ADGRF5|p.K1208Sfs*64|1|0.36|ENSG00000069122|chr6:46858280-46858280|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 132084 10780 VTTRLTWL True NCI_RA007_Epitope_Rep4 988.5705659296399 988.56946993586 48.313 2 -1.4091877639276431 0.40551069890068503 1.0 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.L191Afs*33|1|0.33|ENSG00000137965|chr1:78655087-78655088|-/T|frameshift_variant', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 75891 10619 NLQRTGQVYY True H1975_Epitope_Rep3 1240.6200353031998 1240.61892993586 45.917 2 -1.4093826341208715 0.40557654508433083 1.0 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant', 'ENST00000517674.5_1_8:102644467-102676686:+|nuORF'] 36918 23700 GVLQKGGP True NCI_RA007_Epitope_Rep5 754.4337381036598 754.4331849679301 98.501 1 -1.4095492682267259 0.4055953109552281 1.0 ['ENST00000303991.4_1_5:176025423-176025792:-|nuORF'] 120690 23328 VEIVKSHIVI True PC9_epitope_Rep1 1135.69649471875 1135.69538993586 94.523 2 -1.409572763887595 0.40560930254454725 1.0 ['ENST00000267890.10_3_15:43034669-43034843:-|nuORF'] 38224 9331 HEAVGEIMSL True PC9_epitope_Rep6 1084.52229540788 1084.52118993586 46.074 2 -1.4096479147308787 0.40560930254454725 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 85672 14553 QGRSKEGKSRP True PC9_epitope_Rep3 1228.6636314506798 1228.6625299358602 61.103 2 -1.409768478845528 0.40562806736733087 1.0 ['ENSG00000164620|ENST00000297164|RELL2'] 15813 16966 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 72.019 2 -1.4098382746195959 0.4056586008850391 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 12436 7415 DIVRNLGL True PC9_epitope_Rep3 898.5236157372199 898.52250993586 33.528 2 -1.4101183590742854 0.4057362096764702 1.0 ['STEAP4|p.F357Nfs*35|1|0.06|ENSG00000127954|chr7:88280996-88280997|-/TGTTG|frameshift_variant', 'ENSG00000127954|ENST00000380079|STEAP4'] 61197 19212 LILIASYKVI True PC9_epitope_Rep5 1131.72673221787 1131.72508490379 78.938 3 -1.4101564321544093 0.4057549723431799 1.0 ['OR4C6|p.T217K|1|0.08|ENSG00000181903|chr11:55665816-55665816|C/A|missense_variant'] 125652 25710 VKLGPALK True NCI_RA007_Epitope_Rep1 824.5483739330799 824.5478249679301 106.41 1 -1.4101870094679843 0.40575719060396365 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 271 23516 AAGLKKSH True NCI_RA007_Epitope_Rep5 810.47118624154 810.47008993586 97.768 2 -1.4102354323814152 0.40575719060396365 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 11062 8172 DAVPEVSPPP True H1975_Epitope_Rep3 1006.4971262058599 1006.49602993586 36.413 2 -1.4102538918570513 0.4057641839172443 1.0 ['ENST00000264716.8_1_2:28616261-28626983:+|nuORF'] 139428 17840 YLPKLKAFP True NCI_RA007_Epitope_Rep3 1075.6430025939098 1075.6419099358602 78.219 2 -1.4103803179086705 0.4057730551535049 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 46998 8273 ITQLKLERDVH True NCI_RA007_Epitope_Rep3 1350.7619485096202 1350.76084993586 39.667 2 -1.4104127586136723 0.4057730551535049 1.0 ['CEP128|p.Q875Rfs*7|1|0.32|ENSG00000100629|chr14:80743257-80743257|T/-|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-1|CEP128', 'ENSG00000100629|ENST00000555265|CEP128'] 43161 8955 IFELNKRLQNW True H1975_Epitope_Rep2 1459.7935829910698 1459.79194490379 39.399 3 -1.4104233863868976 0.4057730551535049 1.0 ['nc|ENSG00000198728|Q86U70-3|LDB1', 'nc|ENSG00000198728|Q86U70-2|LDB1', 'ENSG00000198728|ENST00000673968|LDB1'] 87349 13623 QPSLTWMLMV True PC9_epitope_Rep5 1204.5984375536 1204.5967949037902 57.424 3 -1.4104559751596641 0.4057730551535049 1.0 ['nc|ENSG00000169344|P07911-2|UMOD', 'nc|ENSG00000169344|P07911-3|UMOD', 'nc|ENSG00000169344|P07911-4|UMOD', 'ENSG00000169344|ENST00000396138|UMOD', 'nc|ENSG00000169344|P07911-5|UMOD'] 59631 6397 LFYRHYLFYKE True NCI_RA007_Epitope_Rep5 1577.80308504561 1577.80144490379 31.277 3 -1.410489991108265 0.4057730551535049 1.0 ['ENSG00000111684|ENST00000261407|LPCAT3'] 58200 7338 LELDTDGIW True PC9_epitope_Rep1 1060.50769088956 1060.5065899358601 33.038 2 -1.4105287040076382 0.4057730551535049 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 138875 23291 YKEILYLIHV True PC9_epitope_Rep4 1289.73835953073 1289.73726993586 97.843 2 -1.4105381267030046 0.4057730551535049 1.0 ['ENSG00000165164|ENST00000378653|CFAP47'] 81695 24854 PLLYQLNL True H1975_Epitope_Rep2 972.56441792004 972.56332993586 102.17 2 -1.4105464040381872 0.4057730551535049 1.0 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|125|3|anti-sense'] 109082 5486 TALKMRIPVA True H1975_Epitope_Rep2 1098.65833538822 1098.6572299358602 26.116 2 -1.410632636814418 0.40579113328313254 1.0 ['ENSG00000129315|ENST00000261900|CCNT1'] 56585 11371 LDHFNKAP True PC9_epitope_Rep3 940.4766655448 940.47556993586 48.742 2 -1.4106815471465706 0.40579113328313254 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 74190 7673 NEERQDTDMQ True H1975_Epitope_Rep3 1264.498993764 1264.49788993586 34.498 2 -1.4108201637623847 0.40579113328313254 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000492674.1_1_7:99809286-99811635:+|nuORF'] 69786 12361 LVGADPAH True PC9_epitope_Rep4 778.39735259494 778.39680496793 55.353 1 -1.4108698058301492 0.40579113328313254 1.0 ['ENST00000303277.6_1_4:1718443-1718770:-|nuORF'] 98814 20046 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 83.086 2 -1.4108979143156823 0.40579113328313254 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 90762 21676 RERRLQIWYRR True NCI_RA007_Epitope_Rep1 1630.9280598316197 1630.9269699358601 88.714 2 -1.4109111779991166 0.40579113328313254 1.0 ['ENSG00000115286|ENST00000233627|NDUFS7'] 63132 19019 LLRHRLKTHTT True NCI_RA007_Epitope_Rep2 1374.82080079842 1374.8191649037901 78.83 3 -1.4109123751402737 0.40579113328313254 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000549395.1_1_12:51450168-51451905:+|nuORF', 'ENST00000380135.7_1_12:51450138-51451833:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-5|LETMD1', 'ENST00000546814.1_1_12:51450084-51453211:+|nuORF', 'ENST00000552433.1_1_12:51449776-51450294:+|nuORF', 'ENST00000548516.5_1_12:51450138-51453211:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-4|LETMD1'] 107518 17221 SVNVRLSP True PC9_epitope_Rep5 870.49231560894 870.49120993586 71.261 2 -1.410938549268741 0.40579113328313254 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 122544 7341 VGEVITGGQ True PC9_epitope_Rep4 858.4446967101799 858.44358993586 35.566 2 -1.4110037469805652 0.40579113328313254 1.0 ['ENSG00000129295|ENST00000620350|DNAAF11', 'nc|ENSG00000129295|Q86X45-2|DNAAF11'] 34300 3535 GPAKMRRYR True NCI_RA007_Epitope_Rep2 1133.6240155681699 1133.6229099358602 18.401 2 -1.411020804538485 0.40579113328313254 1.0 ['ENST00000558518.5_1_19:11221397-11222199:+|nuORF'] 116658 14368 TVATPGRLL True PC9_epitope_Rep1 926.5549158655 926.55380993586 60.091 2 -1.411028062254932 0.40579113328313254 1.0 ['ENST00000534547.1_1_11:130165680-130166253:+|nuORF'] 36858 9009 GVLKLTAL True NCI_RA007_Epitope_Rep5 813.53238951577 813.53128993586 41.312 2 -1.4111046981439632 0.40579335011883194 1.0 ['PPARA|p.M400Nfs*105|1|0.2|ENSG00000186951|chr22:46235165-46235166|-/A|frameshift_variant'] 21846 7688 ESAVGDRE True H1975_Epitope_Rep2 861.38282472961 861.38227496793 34.524 1 -1.411154687425644 0.40579335011883194 1.0 ['ENSG00000178965|ENST00000326665|ERICH3', 'nc|ENSG00000178965|Q5RHP9-3|ERICH3', 'ERICH3|p.A780Gfs*9|1|0.42|ENSG00000178965|chr1:74573371-74573371|G/-|frameshift_variant'] 16550 10542 EELRQKHEYEL True H1975_Epitope_Rep3 1472.7259569237197 1472.7248499358602 45.616 2 -1.4112596770459669 0.40581210659450556 1.0 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 127839 3659 VPFFVFFLL True NCI_RA007_Epitope_Rep4 1127.6419399647498 1127.64028490379 20.175 3 -1.4113330315467996 0.40581909736928795 1.0 ['nc|ENSG00000184999|Q63ZE4-2|SLC22A10', 'ENSG00000184999|ENST00000332793|SLC22A10'] 101256 13281 SLHVPPETLG True PC9_epitope_Rep5 1048.5553097883198 1048.5542099358602 56.095 2 -1.4114401726913448 0.40586138334294153 1.0 ['ENSG00000150048|ENST00000315330|CLEC1A'] 37164 22281 GVQNVLKKHQA True PC9_epitope_Rep2 1220.69895433024 1220.6978499358602 91.181 2 -1.4115013130442375 0.40586359839527525 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 106621 6268 STRARRLQPR True NCI_RA007_Epitope_Rep4 1239.72723476675 1239.72559490379 30.714 3 -1.4115631197959368 0.40586359839527525 1.0 ['ENST00000302904.8_1_17:42294008-42298982:-|nuORF'] 58897 5174 LETDAMFRLEH True NCI_RA007_Epitope_Rep2 1360.64453579888 1360.64342993586 24.746 2 -1.4116241446954372 0.4058705882352941 1.0 ['ENSG00000104957|ENST00000221554|YJU2B', 'ENST00000587019.5_1_19:13869900-13872373:+|nuORF', 'ENST00000589096.1_1_19:13869843-13870239:+|nuORF', 'ENST00000593174.5_1_19:13869843-13873879:+|nuORF'] 8817 5705 AVDYLGRSA True PC9_epitope_Rep2 950.4821448480599 950.48159496793 27.331 1 -1.411684176911873 0.40590110704579946 1.0 ['nc|ENSG00000174501|Q5JPF3|ANKRD36C', 'ENSG00000174501|ENST00000295246|ANKRD36C'] 127933 11796 VPGWHPMA True PC9_epitope_Rep4 893.4217935209699 893.42068993586 53.142 2 -1.4117205502237458 0.40590332105925675 1.0 ['ENST00000377291.2_1_5:175110069-175110369:+|nuORF'] 61194 19320 LILIASYKVI True PC9_epitope_Rep1 1131.72673221787 1131.72508490379 79.12 3 -1.411761845811482 0.40590332105925675 1.0 ['OR4C6|p.T217K|1|0.08|ENSG00000181903|chr11:55665816-55665816|C/A|missense_variant'] 131955 21434 VTSAAGHA True PC9_epitope_Rep6 712.35040240252 712.34985496793 95.321 1 -1.411911297815181 0.40592207425532917 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF'] 130483 4518 VSPPTHGR True NCI_RA007_Epitope_Rep5 849.44569976969 849.44460993586 24.031 2 -1.411974651102928 0.4059265010351967 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 80787 16456 PHLFAQLSKV True PC9_epitope_Rep3 1138.6498788795 1138.6482449037899 68.436 3 -1.4120047087907814 0.4059265010351967 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'CNOT1|p.P693Afs*7|1|0.13|ENSG00000125107|chr16:58560265-58560266|-/C|frameshift_variant', 'CNOT1|p.A195Tfs*7|1|0.2|ENSG00000125107|chr16:58586580-58586599|TCTTGTCCAACTCCAAAGGC/-|frameshift_variant', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 20480 10602 EPKGSYPALI True NCI_RA007_Epitope_Rep5 1073.57571087973 1073.57460993586 47.418 2 -1.4120177015463247 0.4059265010351967 1.0 ['ENST00000392238.2_1_2:203631321-203631381:+|nuORF'] 130723 21182 VSVPVHGA True PC9_epitope_Rep3 764.4180880395201 764.41698993586 86.765 2 -1.4120380153359633 0.4059265010351967 1.0 ['ENST00000312438.7_1_11:67134982-67141182:-|nuORF'] 65200 17363 LQRLHVTH True H1975_Epitope_Rep3 1002.5722972651402 1002.5717749679301 72.443 1 -1.4120548441493146 0.40592871426890953 1.0 ['MUS81|p.V311Wfs*46|1|0.18|ENSG00000172732|chr11:65863689-65863689|G/-|frameshift_variant', 'ENST00000531905.1_1_11:65631029-65631326:+|nuORF', 'ENSG00000172732|ENST00000308110|MUS81', 'ENST00000530928.5_1_11:65630557-65632047:+|nuORF'] 95477 7726 RWLWWQPWWWK True NCI_RA007_Epitope_Rep1 1756.8779217517197 1756.87682993586 34.045 2 -1.4120648198531376 0.40592871426890953 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 135881 23748 WPKDVNPLE True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 96.14 2 -1.412128751909129 0.4059331404239302 1.0 ['ENSG00000171595|ENST00000311014|DNAI2', 'nc|ENSG00000171595|Q9GZS0-2|DNAI2'] 110671 17004 TGAFVGTPA True PC9_epitope_Rep4 819.4126683059098 819.41211496793 73.399 1 -1.4121531716094933 0.4059331404239302 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11', 'nc|ENSG00000108528|Q02978-2|SLC25A11', 'ENST00000574710.1_1_17:4841038-4842521:-|nuORF'] 126873 8367 VLQGSRASV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 39.641 2 -1.4121651258473806 0.4059331404239302 1.0 ['nc|ENSG00000154263|Q8WWZ4-2|ABCA10', 'ENSG00000154263|ENST00000690296|ABCA10', 'ENST00000522406.5_1_17:67144970-67178294:-|nuORF', 'ENST00000519732.5_1_17:67144970-67171813:-|nuORF'] 60557 22695 LHEKKNKRP True PC9_epitope_Rep1 1148.6778249628398 1148.67672993586 92.101 2 -1.4122077960651704 0.4059331404239302 1.0 ['nc|ENSG00000198001|Q9NWZ3-2|IRAK4', 'ENSG00000198001|ENST00000613694|IRAK4'] 114815 23996 TQLLFLKA True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56840993586 103.95 2 -1.4123659967658593 0.4059728528076407 1.0 ['nc|ENSG00000014123|O94874-3|UFL1', 'ENSG00000014123|ENST00000369278|UFL1', 'nc|ENSG00000014123|O94874-2|UFL1'] 65257 15919 LQTLEIKKV True PC9_epitope_Rep1 1070.66994561774 1070.6688499358602 66.043 2 -1.412373408906279 0.4059728528076407 1.0 ['nc|ENSG00000198054|Q96T75-4|DSCR8', 'ENST00000469658.5_1_21:39494425-39528428:+|nuORF'] 56161 17004 LAVRSRSK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56084496793 72.168 1 -1.4124088220081106 0.4059728528076407 1.0 ['ENST00000262207.8_1_8:75896754-75896892:+|nuORF'] 46051 5245 ISGMTPQLQ True NCI_RA007_Epitope_Rep1 973.4902670036099 973.48916993586 24.486 2 -1.412427438418376 0.4059728528076407 1.0 ['TBX18|p.S493T|1|0.52|ENSG00000112837|chr6:84737032-84737032|A/T|missense_variant'] 75920 11920 NLRKRVLEME True PC9_epitope_Rep5 1286.71289014222 1286.71123490379 50.847 3 -1.4126197202494968 0.4060386501840765 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'nc|ENSG00000118407|Q7Z7B0-3|FILIP1'] 128369 24640 VPRDIYQRI True PC9_epitope_Rep4 1158.65094150866 1158.6498499358602 103.27 2 -1.4126502335092046 0.40605739825923315 1.0 ['nc|ENSG00000151332|Q9NS73-5|MBIP', 'ENSG00000151332|ENST00000416007|MBIP', 'ENST00000604768.1_1_14:36774495-36780794:-|nuORF', 'nc|ENSG00000151332|Q9NS73-2|MBIP'] 87675 22976 QQTVRKAI True PC9_epitope_Rep5 942.5610638750998 942.55996993586 93.367 2 -1.4127240018460852 0.40606438409334167 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 132855 17595 VVLLLDDL True NCI_RA007_Epitope_Rep1 898.53753446586 898.53642993586 72.576 2 -1.4129432426330752 0.4060783552685744 1.0 ['ENSG00000130702|ENST00000252999|LAMA5'] 120003 9195 VDRAEVPP True PC9_epitope_Rep1 881.4606811274899 881.45958993586 40.219 2 -1.412960574481381 0.4060783552685744 1.0 ['ENSG00000182749|ENST00000675840|PAQR7'] 101016 10585 SLGAARPLP True NCI_RA007_Epitope_Rep2 880.5130510535199 880.51194993586 45.772 2 -1.4130091642349925 0.4060971019947309 1.0 ['ENST00000487192.1_1_2:242162779-242163565:+|nuORF'] 130536 4767 VSQVITVN True PC9_epitope_Rep4 858.4810822188999 858.47998993586 24.906 2 -1.4131669434401146 0.4061180566173098 1.0 ['ENST00000429644.6_1_3:81640267-81643094:-|nuORF'] 139448 17003 YLPVLRGFPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 73.395 2 -1.4131827658870852 0.4061180566173098 1.0 ['ENSG00000008405|ENST00000008527|CRY1'] 38625 6099 HFFVEWFQYRK True NCI_RA007_Epitope_Rep1 1585.78301830737 1585.7813849037902 27.762 3 -1.4131968816657923 0.4061180566173098 1.0 ['CENPP|p.E178Q|1|0.35|ENSG00000188312|chr9:92379827-92379827|G/C|missense_variant'] 80681 12144 PGVHGQPG True NCI_RA007_Epitope_Rep2 747.3663868198299 747.36583496793 51.832 1 -1.4132507328721389 0.4061459938140208 1.0 ['ENST00000546361.6_1_19:16628883-16629183:-|nuORF'] 21118 20824 ERAGGRHG True PC9_epitope_Rep6 838.4157966237399 838.41468993586 92.872 2 -1.4133254638399269 0.4061459938140208 1.0 ['ENST00000300249.9_1_18:32621372-32650196:+|nuORF'] 107011 7960 SVFFFFFFFFW True H1975_Epitope_Rep1 1566.7376312547394 1566.73597490379 35.567 3 -1.4133331212665896 0.4061459938140208 1.0 ['ENST00000241416.11_1_2:148602472-148602628:+|nuORF'] 92558 24290 RMKPAGSV True NCI_RA007_Epitope_Rep5 844.4589073056799 844.45780993586 100.86 2 -1.4133387930638674 0.4061459938140208 1.0 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'ENST00000555848.1_1_14:100607475-100610072:+|nuORF', 'ENST00000553694.5_1_14:100603907-100610072:+|nuORF'] 13029 11512 DLNMESRPV True PC9_epitope_Rep2 1059.50189431647 1059.5007899358602 49.604 2 -1.4133619093503555 0.406152977702512 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D'] 22797 9361 EVAAQNYR True NCI_RA007_Epitope_Rep4 949.4617437566499 949.46064993586 42.862 2 -1.4134820185058974 0.40617613509413547 1.0 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81'] 101597 11237 SLLPQKQEV True H1975_Epitope_Rep3 1040.5866099165999 1040.58550993586 48.326 2 -1.4135072929176054 0.40617613509413547 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'ZNF808|p.Y483Lfs*8|1|0.09|ENSG00000198482|chr19:52554363-52554364|-/TGTCACATTCTTC|frameshift_variant', 'nc|ENSG00000189190|Q6ZNG1|ZNF600', 'ENSG00000189190|ENST00000692063|ZNF600', 'ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808'] 13364 8336 DLWLLPLPA True NCI_RA007_Epitope_Rep2 1036.5957180483197 1036.5946299358602 37.065 2 -1.4135107922261807 0.40617613509413547 1.0 ['ENST00000419841.2_2_7:99754495-99754932:-|nuORF'] 83186 7501 PSTATKIHSP True PC9_epitope_Rep1 1037.55055876105 1037.54946993586 33.67 2 -1.4135707355653249 0.40617613509413547 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8', 'nc|ENSG00000033030|Q6NZY4-2|ZCCHC8'] 103055 23807 SPGALLPRHR True PC9_epitope_Rep2 1102.63596015086 1102.63537496793 97.043 1 -1.413594335953056 0.40617613509413547 1.0 ['SF3B3-CDH15|1|fusion', 'ENSG00000129910|ENST00000289746|CDH15'] 136674 12416 WWTRKRRKERE True H1975_Epitope_Rep3 1629.8964253501697 1629.8953299358602 52.947 2 -1.4136320780646843 0.4061831181354218 1.0 ['ENSG00000184916|ENST00000331782|JAG2', 'ENST00000546616.1_1_14:105609034-105613077:-|nuORF', 'nc|ENSG00000184916|Q9Y219-2|JAG2'] 67153 17122 LSQRVVLGL True PC9_epitope_Rep5 983.6127650947898 983.61166993586 70.88 2 -1.4136943302076659 0.40620186032291067 1.0 ['nc|ENSG00000105711|Q07699-2|SCN1B'] 18089 18896 EIHRRNAFRNK True H1975_Epitope_Rep1 1439.7858122720297 1439.78470993586 78.793 2 -1.4137342031734124 0.40622280755391454 1.0 ['ENSG00000187815|ENST00000372706|ZFP69'] 5443 10806 ALVGTQDRIS True PC9_epitope_Rep3 1058.57202248162 1058.57092993586 46.532 2 -1.4137507694518072 0.40622280755391454 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2'] 120964 4860 VEPHSPSPSSK True NCI_RA007_Epitope_Rep3 1150.56185172074 1150.56074993586 26.103 2 -1.4137608942900695 0.40622280755391454 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 122807 9011 VGGQRGSQ True H1975_Epitope_Rep2 787.3936641968298 787.39256993586 39.612 2 -1.4138074025812124 0.4062272182113209 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF', 'nc|ENSG00000080031|Q9HD43-3|PTPRH'] 119433 13446 VAQQRYWEWTP True PC9_epitope_Rep1 1462.6993482530597 1462.69824993586 56.579 2 -1.4139355685966537 0.4062272182113209 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 91796 21968 RKHQKRKRHLE True PC9_epitope_Rep6 1514.90184508378 1514.90020490379 97.419 3 -1.4139665532680061 0.4062272182113209 1.0 ['ENSG00000166432|ENST00000651725|ZMAT1', 'nc|ENSG00000166432|Q5H9K5-2|ZMAT1', 'nc|ENSG00000166432|Q5H9K5|ZMAT1'] 68912 18073 LTNRLFRR True NCI_RA007_Epitope_Rep4 1074.6410455313 1074.6399499358602 78.207 2 -1.414041595053255 0.4062272182113209 1.0 ['SERPIND1|p.H207N|1|0.16|ENSG00000099937|chr22:20779931-20779931|C/A|missense_variant'] 123424 12985 VGNGKGAA True NCI_RA007_Epitope_Rep4 672.3554877829599 672.35493496793 57.047 1 -1.4141418761665885 0.40624338624338624 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 63177 23504 LLRRRLRQWRW True NCI_RA007_Epitope_Rep5 1637.9855151380898 1637.98387490379 97.718 3 -1.4141629111164236 0.40624338624338624 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 125662 25965 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 107.43 1 -1.4142259976253853 0.40624338624338624 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 10308 19744 CDLLPRRCK True NCI_RA007_Epitope_Rep4 1102.57395414126 1102.5728499358602 85.321 2 -1.4142429474274358 0.40624338624338624 1.0 ['nc|ENSG00000263155|P0CAP1-2|MYZAP'] 35563 6356 GSWFYIQPFYK True H1975_Epitope_Rep1 1434.6972229947398 1434.69556490379 29.508 3 -1.414326157390723 0.40625918480113804 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant', 'ENST00000467056.5_1_3:4536161-4687445:+|nuORF', 'ITPR1|p.A315Kfs*5|1|0.12|ENSG00000150995|chr3:4652209-4652210|-/AA|frameshift_variant'] 87750 19674 QRAVLKERH True NCI_RA007_Epitope_Rep2 1135.65742387143 1135.6563299358602 81.477 2 -1.4143273724209346 0.40625918480113804 1.0 ['nc|ENSG00000167110|Q08379|GOLGA2', 'ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 10461 18675 CILPEGKG True H1975_Epitope_Rep1 815.4211248146299 815.4205749679301 77.881 1 -1.4143740593180725 0.40625918480113804 1.0 ['THSD7A|p.V979G|1|0.28|ENSG00000005108|chr7:11446189-11446189|A/C|missense_variant'] 124377 9138 VGVAELTE True NCI_RA007_Epitope_Rep4 816.42289863644 816.42180993586 41.989 2 -1.4143750283445873 0.40625918480113804 1.0 ['ENST00000478771.2_1_7:150037434-150037698:-|nuORF', 'ENSG00000106538|ENST00000223271|RARRES2'] 96062 9267 RYLRRKERPDR True NCI_RA007_Epitope_Rep1 1543.8807752860298 1543.8796699358602 40.045 2 -1.4144399489771269 0.40625918480113804 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 102555 11195 SLVTEEIVNVH True PC9_epitope_Rep3 1238.6506667251401 1238.64901490379 48.066 3 -1.4144549321245246 0.40625918480113804 1.0 ['nc|ENSG00000151422|P16591-2|FER', 'ENSG00000151422|ENST00000281092|FER'] 20204 5350 ENISQPVV True H1975_Epitope_Rep2 884.46034677432 884.45924993586 25.626 2 -1.4145991551957762 0.40625918480113804 1.0 ['GBP6|p.K33N|1|0.4|ENSG00000183347|chr1:89368650-89368650|G/C|missense_variant'] 69760 15607 LVFRHEIE True PC9_epitope_Rep1 1041.56072952193 1041.5596299358601 64.853 2 -1.4146049500737172 0.40625918480113804 1.0 ['ENSG00000147408|ENST00000692225|CSGALNACT1', 'nc|ENSG00000147408|Q8TDX6-2|CSGALNACT1', 'ENST00000397998.7_1_8:19263293-19315147:-|nuORF'] 57457 6103 LECELSGTPPF True PC9_epitope_Rep4 1191.54817580255 1191.54706993586 30.485 2 -1.4146236419005531 0.40625918480113804 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 58407 11135 LENRVEDLWRK True NCI_RA007_Epitope_Rep1 1456.7786612029197 1456.7775699358601 47.313 2 -1.4147283595033588 0.4062779214671996 1.0 ['ENSG00000139537|ENST00000320516|CCDC65', 'nc|ENSG00000139537|Q8IXS2-2|CCDC65'] 56227 24659 LCKRRHKPR True NCI_RA007_Epitope_Rep1 1192.7087482516397 1192.7076499358602 102.11 2 -1.4148167401204097 0.4062801250852319 1.0 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 105386 16961 SRRVPGTP True NCI_RA007_Epitope_Rep5 868.4878989348399 868.48680993586 72.0 2 -1.4148218647137072 0.4062801250852319 1.0 ['ENST00000361256.9_1_9:131585006-131586171:-|nuORF'] 56543 14078 LDGKLLRTEPA True NCI_RA007_Epitope_Rep1 1211.68738658703 1211.68628993586 58.79 2 -1.4148834450182517 0.4063010638923176 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1'] 5349 11384 ALRQTANV True PC9_epitope_Rep6 871.4875645816699 871.48646993586 54.838 2 -1.4149690850938117 0.4063010638923176 1.0 ['ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 49197 15582 KEMMKETFKYF True H1975_Epitope_Rep1 1480.7094445545602 1480.70834993586 65.219 2 -1.41497163803898 0.4063010638923176 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 130130 19129 VSDRYKVFVDL True H1975_Epitope_Rep1 1339.7136013348697 1339.71250993586 79.724 2 -1.4150515574613842 0.4063080431664825 1.0 ['ENSG00000151790|ENST00000536354|TDO2'] 6106 5639 APMDVGEEPL True NCI_RA007_Epitope_Rep2 1056.47976188956 1056.4786699358601 26.548 2 -1.4151077738264193 0.4063238319130179 1.0 ['ENSG00000197594|ENST00000647893|ENPP1'] 67484 5798 LSSSVSRAP True PC9_epitope_Rep2 902.48214484806 902.48104993586 27.694 2 -1.4151122250729318 0.4063238319130179 1.0 ['nc|ENSG00000099904|Q9ULC8-2|ZDHHC8', 'ENSG00000099904|ENST00000334554|ZDHHC8', 'nc|ENSG00000099904|Q9ULC8-3|ZDHHC8'] 127335 25054 VMLFLHGG True PC9_epitope_Rep4 872.4578446765199 872.45674993586 104.93 2 -1.4151365030658964 0.4063238319130179 1.0 ['ENSG00000169992|ENST00000302926|NLGN2'] 9450 7820 AVVGGGESLWE True NCI_RA007_Epitope_Rep1 1102.5294889632999 1102.52838993586 34.409 2 -1.415168948864133 0.4063238319130179 1.0 ['ENST00000557600.5_1_14:94547684-94567230:+|nuORF'] 17696 23325 EHMHNRFV True NCI_RA007_Epitope_Rep3 1068.4923326922801 1068.49122993586 101.3 2 -1.4152165702887065 0.4063238319130179 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000526572.5_1_11:67049183-67049837:+|nuORF', 'ENST00000416281.6_1_11:67048455-67049666:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 67691 10420 LSWKEEEL True PC9_epitope_Rep1 1032.51277627 1032.51166993586 44.967 2 -1.4152318431397206 0.4063238319130179 1.0 ['nc|ENSG00000171804|Q6ZQQ6|WDR87', 'nc|ENSG00000171804|Q6ZQQ6-2|WDR87', 'ENSG00000171804|ENST00000447313|WDR87'] 59791 10981 LGELIYPWRQR True H1975_Epitope_Rep2 1429.78301830737 1429.78192993586 47.265 2 -1.4153046491592487 0.4063238319130179 1.0 ['ENSG00000007541|ENST00000321878|PIGQ', 'ENST00000476438.1_1_16:632096-633032:+|nuORF', 'ENST00000480424.6_1_16:630665-633032:+|nuORF'] 23453 6615 EVTLCAYITI True H1975_Epitope_Rep3 1124.57874765484 1124.57764993586 30.398 2 -1.4153079825970205 0.4063238319130179 1.0 ['A2M|p.S1102C|1|0.4|ENSG00000175899|chr12:9077392-9077392|G/C|missense_variant'] 63576 2770 LMEEINEDEP True H1975_Epitope_Rep2 1217.51218421665 1217.5105349037901 14.685 3 -1.4153300444191448 0.4063238319130179 1.0 ['ENST00000507175.5_1_5:145826912-145859658:+|nuORF', 'nc|ENSG00000113649|O14776-2|TCERG1', 'nc|ENSG00000113649|O14776|TCERG1', 'ENSG00000113649|ENST00000679501|TCERG1', 'TCERG1|p.V623F|1|0.33|ENSG00000113649|chr5:146480075-146480075|G/T|missense_variant'] 85165 7413 QENKNLPQAV True H1975_Epitope_Rep2 1139.5934862021898 1139.5923899358602 33.457 2 -1.4153629104288603 0.40632603406326034 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 80524 8453 PGPHGPNG True NCI_RA007_Epitope_Rep5 731.33508669155 731.33453496793 39.196 1 -1.4153705135478665 0.40632603406326034 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 53142 18470 KPYMRKFK True NCI_RA007_Epitope_Rep5 1096.6215559566797 1096.62097496793 77.872 1 -1.4154362730319028 0.40633521391631405 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant'] 85229 13667 QEQEERRRRAR True NCI_RA007_Epitope_Rep2 1512.7981678608796 1512.79706993586 57.804 2 -1.415468932872601 0.40633521391631405 1.0 ['nc|ENSG00000198720|Q86YJ7-2|ANKRD13B', 'ENST00000487527.5_1_17:27916841-27940597:+|nuORF', 'ENSG00000198720|ENST00000394859|ANKRD13B'] 128324 21404 VPPQRPRR True PC9_epitope_Rep3 1004.5991807193199 1004.59808993586 87.624 2 -1.4154769517194417 0.40633521391631405 1.0 ['ENST00000565396.5_1_16:2052722-2053019:-|nuORF'] 128724 16697 VPWWVILL True PC9_epitope_Rep4 1024.6109741896398 1024.6098699358602 72.199 2 -1.41550106028716 0.4063491690369291 1.0 ['ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-9|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7', 'ENST00000557555.1_3_12:56079014-56082669:-|nuORF'] 82894 13695 PSAAWHFR True NCI_RA007_Epitope_Rep4 970.47733425114 970.47622993586 59.902 2 -1.4155114569338085 0.4063491690369291 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-4|IGFN1'] 41912 6205 IDARYEGLEVI True H1975_Epitope_Rep1 1276.6663167892798 1276.66520993586 28.936 2 -1.415552158909077 0.40635137041041797 1.0 ['ENSG00000181541|ENST00000317605|MAB21L2'] 16419 16498 EEKKRKREREH True NCI_RA007_Epitope_Rep2 1523.8280710068298 1523.82696993586 68.901 2 -1.4155563231816362 0.40635137041041797 1.0 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000487688.1_1_5:889867-892539:-|nuORF', 'ENST00000466684.5_1_5:889867-892639:-|nuORF', 'ENST00000495265.5_1_5:889867-892820:-|nuORF', 'ENST00000483173.5_3_5:889166-892639:-|nuORF', 'BRD9|p.E194Sfs*5|1|0.35|ENSG00000028310|chr5:889038-889048|ACTTGTATTCA/-|frameshift_variant'] 63113 4646 LLRDFPNRWEY True H1975_Epitope_Rep1 1507.75719748235 1507.75555490379 22.904 3 -1.4156461038748707 0.40635834753481814 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1', 'APAF1|p.E478Kfs*26|1|0.19|ENSG00000120868|chr12:98667581-98667581|G/-|frameshift_variant', 'APAF1|p.I821Kfs*48|1|0.12|ENSG00000120868|chr12:98699564-98699565|-/AAGAAAAAGTT|frameshift_variant'] 116520 21647 TTSFAGSS True H1975_Epitope_Rep2 756.3289982516001 756.32790993586 89.549 2 -1.4156535911159729 0.4063653244952166 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20', 'ENST00000457750.1_1_3:195341833-195346985:+|nuORF'] 125666 26063 VKLGPALK True PC9_epitope_Rep3 824.5483739330799 824.5478249679301 106.16 1 -1.4157960817211508 0.4063840539682913 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 124298 12791 VGTNRALL True PC9_epitope_Rep3 842.4974009893799 842.49630993586 54.221 2 -1.4158929519246344 0.4063910304625799 1.0 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 109809 5220 TEEEKERIY True H1975_Epitope_Rep2 1195.5720820512697 1195.57098993586 25.146 2 -1.4159265752631955 0.40639800679288746 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 44819 14208 INALRRCFFWR True H1975_Epitope_Rep3 1480.7873924951598 1480.7862899358602 59.989 2 -1.4160101064992083 0.40642810975968036 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR', 'nc|ENSG00000001626|P13569-3|CFTR'] 125658 25699 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 106.39 1 -1.4160248336196075 0.40642810975968036 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 33464 17612 GLARRSAV True PC9_epitope_Rep5 828.49298431528 828.49188993586 72.753 2 -1.4160361775744965 0.40642810975968036 1.0 ['ENST00000202834.11_1_20:5090032-5093697:-|nuORF'] 125655 24595 VKLGPALK True NCI_RA007_Epitope_Rep3 824.5483739330799 824.5478249679301 106.38 1 -1.4160369222611349 0.40642810975968036 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 5029 8571 ALINMRIWRKD True NCI_RA007_Epitope_Rep4 1414.7867237888197 1414.78507490379 39.752 3 -1.416103389874322 0.40642810975968036 1.0 ['ENST00000297540.4_1_5:125960605-125960665:+|nuORF'] 61474 26206 LKAKKPQKRKP True PC9_epitope_Rep3 1320.8717737421198 1320.8701349037901 106.88 3 -1.4161264996272462 0.40642810975968036 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 97117 24169 SDLCESRQ True H1975_Epitope_Rep2 936.3970948947599 936.39598993586 99.499 2 -1.4161611873500812 0.4064538115327215 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 122377 15340 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 64.162 2 -1.4161692970095496 0.4064538115327215 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2'] 34571 5515 GPSTPQRI True PC9_epitope_Rep2 854.46101548066 854.45990993586 26.604 2 -1.4162253616642588 0.40645820848168646 1.0 ['nc|ENSG00000105339|A2RUS2-3|DENND3'] 125659 25785 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 106.73 1 -1.4162339621036584 0.40645820848168646 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 125656 24679 VKLGPALK True NCI_RA007_Epitope_Rep3 824.5483739330799 824.5478249679301 106.72 1 -1.4162460507451857 0.40645820848168646 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 11167 6701 DDMKIKGQEKY True H1975_Epitope_Rep2 1353.65985150985 1353.6587499358602 30.686 2 -1.416270053051913 0.40645820848168646 1.0 ['ENSG00000153933|ENST00000284061|DGKE'] 3826 18629 AGVLGFRRR True NCI_RA007_Epitope_Rep2 1030.6148307834599 1030.61427496793 77.262 1 -1.4163125891457173 0.4064769335620784 1.0 ['ENST00000409185.5_1_2:131807576-131807882:-|nuORF'] 74077 11160 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 47.965 1 -1.4163672940161731 0.4064839077353325 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 132286 5246 VTWHVPIDCIL True NCI_RA007_Epitope_Rep1 1294.6743793751798 1294.6727249037901 24.489 3 -1.4164136432368435 0.4065026320736981 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 125660 25874 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 107.08 1 -1.4164492414254757 0.40652135597203454 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 108653 15118 SYPSDIIRVT True PC9_epitope_Rep1 1149.60298825673 1149.60188993586 62.969 2 -1.4164824439827657 0.4065283293774822 1.0 ['ZBTB21|p.D439Y|1|0.37|ENSG00000173276|chr21:41992781-41992781|C/A|missense_variant'] 19042 7022 ELFIQQER True NCI_RA007_Epitope_Rep5 1061.5505587610498 1061.54946993586 33.689 2 -1.4164953906146167 0.406535302619056 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP', 'ENST00000473914.1_1_5:96332105-96341995:+|nuORF'] 78775 5248 PAANVARK True PC9_epitope_Rep3 825.48208527841 825.48098993586 25.265 2 -1.4166617187511275 0.4065775250270245 1.0 ['ENSG00000180720|ENST00000682254|CHRM4'] 19367 9313 ELLPMIPDLP True PC9_epitope_Rep5 1136.61513316356 1136.6140299358601 40.775 2 -1.416688113757208 0.40659624716539966 1.0 ['RPTOR|p.A1100Cfs*2|1|0.14|ENSG00000141564|chr17:80949470-80949471|-/T|frameshift_variant', 'ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF', 'ENST00000574767.5_1_17:78681670-78831736:+|nuORF', 'nc|ENSG00000141564|Q8N122-2|RPTOR'] 110156 15460 TENYLEIEGM True H1975_Epitope_Rep2 1197.5223549775299 1197.5212499358602 64.624 2 -1.4167102039484663 0.40660321936317706 1.0 ['nc|ENSG00000064933|P54277-2|PMS1', 'nc|ENSG00000064933|P54277-3|PMS1', 'ENSG00000064933|ENST00000441310|PMS1', 'nc|ENSG00000064933|P54277-4|PMS1'] 64266 15458 LPHKVCRRC True H1975_Epitope_Rep1 1110.59027291174 1110.5891699358601 64.73 2 -1.4167559750497036 0.4066289124917755 1.0 ['ENSG00000140479|ENST00000611716|PCSK6', 'nc|ENSG00000140479|P29122-2|PCSK6'] 131768 10746 VTPRRISWRQR True NCI_RA007_Epitope_Rep5 1453.83784784489 1453.83674993586 47.972 2 -1.4168007885714147 0.4066289124917755 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4'] 110901 4996 TGVFSTRS True PC9_epitope_Rep2 853.42938099921 853.42828993586 24.589 2 -1.4168824830146796 0.406642465254526 1.0 ['ENSG00000136932|ENST00000375119|TRMO'] 57236 22418 LDWKFHRVHKW True PC9_epitope_Rep5 1550.82588617886 1550.82478993586 91.232 2 -1.4169265850609605 0.406642465254526 1.0 ['RPIA|p.D263H|1|0.29|ENSG00000153574|chr2:88738025-88738025|G/C|missense_variant'] 135221 7937 WFEKQFVPFHP True H1975_Epitope_Rep2 1460.7241064489197 1460.72300993586 35.477 2 -1.4169291784679123 0.406642465254526 1.0 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD', 'ENST00000469841.5_1_3:57131519-57204269:-|nuORF'] 95485 8004 RWNRETWSPWP True H1975_Epitope_Rep3 1513.7214806799698 1513.72038993586 35.758 2 -1.4169728297866824 0.406642465254526 1.0 ['ENST00000501122.2_1_11:65191387-65191489:+|nuORF'] 125663 26094 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 107.95 1 -1.4169843643111355 0.406642465254526 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 109442 16429 TDINWRFTG True PC9_epitope_Rep4 1108.53015766964 1108.5290699358602 71.155 2 -1.4170560242212529 0.406642465254526 1.0 ['nc|ENSG00000187258|Q6W5P4-7|NPSR1', 'nc|ENSG00000187258|Q6W5P4-8|NPSR1', 'nc|ENSG00000187258|Q6W5P4-5|NPSR1', 'ENSG00000187258|ENST00000360581|NPSR1', 'nc|ENSG00000187258|Q6W5P4-4|NPSR1', 'nc|ENSG00000187258|Q6W5P4-3|NPSR1'] 68470 19192 LTFGRNTAR True PC9_epitope_Rep5 1034.5621265042598 1034.56102993586 78.861 2 -1.4170592500148207 0.406642465254526 1.0 ['ENST00000318948.6_1_21:16386771-16415865:-|nuORF', 'ENST00000400199.5_1_21:16340786-16415865:-|nuORF'] 10045 13262 AYSNDGEHWT True PC9_epitope_Rep4 1178.4628659554598 1178.46176993586 58.911 2 -1.4170747089159306 0.4066442684961116 1.0 ['nc|ENSG00000164176|O43854-2|EDIL3', 'ENSG00000164176|ENST00000296591|EDIL3'] 4541 6253 AKIQEILQRK True NCI_RA007_Epitope_Rep3 1225.7506555499297 1225.7490149037899 31.6 3 -1.417089860514917 0.4066442684961116 1.0 ['ENSG00000165269|ENST00000297988|AQP7'] 129534 13677 VRKSSGRGEL True NCI_RA007_Epitope_Rep5 1087.60980497267 1087.6087099358601 59.292 2 -1.4170963809772974 0.4066442684961116 1.0 ['nc|ENSG00000132872|Q9H2B2-2|SYT4', 'ENSG00000132872|ENST00000255224|SYT4'] 91076 14362 RFLSRFKTR True H1975_Epitope_Rep2 1209.70945944429 1209.70780490379 60.394 3 -1.417122013678738 0.4066442684961116 1.0 ['ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 34275 19936 GNTLTSLK True PC9_epitope_Rep6 832.46543215476 832.46432993586 89.342 2 -1.4172010668945298 0.4066442684961116 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 125664 26186 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 108.31 1 -1.417205794470719 0.4066442684961116 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 125665 26285 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 108.7 1 -1.4172065512424403 0.4066442684961116 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 67188 11778 LSRCLNTFDL True PC9_epitope_Rep3 1180.59104367404 1180.58938490379 50.322 3 -1.4172536315007103 0.406658208814961 1.0 ['ENSG00000139514|ENST00000380752|SLC7A1'] 40078 5996 HPVCYRCST True PC9_epitope_Rep1 1064.4531703022399 1064.4520699358602 27.879 2 -1.4172737970366724 0.406658208814961 1.0 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000562988.5_1_16:2052496-2059683:-|nuORF', 'ENST00000565396.5_1_16:2053615-2059683:-|nuORF', 'ZNF598|p.E88Kfs*204|1|0.2|ENSG00000167962|chr16:2003029-2003030|-/TT|frameshift_variant'] 112451 19545 TLDEIYNRK True PC9_epitope_Rep5 1150.59823722946 1150.5971499358602 80.232 2 -1.4174259856714513 0.40667653346489063 1.0 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.S2000Nfs*4|1|0.1|ENSG00000149311|chr11:108312489-108312490|-/AATCACTTAT|frameshift_variant', 'ATM|p.L2006*|1|0.3|ENSG00000149311|chr11:108315832-108315832|T/-|frameshift_variant'] 24602 17552 FAILLFPP True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 74.302 2 -1.4175095015426504 0.40667653346489063 1.0 ['ENSG00000283758|ENST00000640449|PMIS2'] 80586 23567 PGPVHGGG True H1975_Epitope_Rep1 676.32927303512 676.32872496793 97.888 1 -1.4175561863745376 0.40667653346489063 1.0 ['ENST00000546812.1_1_12:109210822-109217118:-|nuORF', 'ENST00000343638.9_1_17:42283996-42284245:-|nuORF'] 139742 23103 YPALIPIT True NCI_RA007_Epitope_Rep3 886.51640509846 886.51530993586 100.38 2 -1.4175665480713198 0.40667653346489063 1.0 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 64882 7887 LQEAWRSI True PC9_epitope_Rep5 1001.5294293936499 1001.52832993586 35.28 2 -1.4175820612624097 0.40667653346489063 1.0 ['ENSG00000135632|ENST00000389501|SMYD5'] 34204 25220 GNIRRARKRKY True PC9_epitope_Rep2 1416.8538322621998 1416.85272993586 102.68 2 -1.4175975372282008 0.40667653346489063 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 20145 7546 ENDKLKEYVK True H1975_Epitope_Rep1 1264.66631678928 1264.66520993586 34.02 2 -1.4176663910241258 0.4066853022010289 1.0 ['nc|ENSG00000122417|Q9ULJ1-3|ODF2L', 'nc|ENSG00000122417|Q9ULJ1|ODF2L', 'ENST00000480440.5_1_1:86847891-86851212:-|nuORF', 'nc|ENSG00000122417|Q9ULJ1-6|ODF2L', 'nc|ENSG00000122417|Q9ULJ1-2|ODF2L', 'ENSG00000122417|ENST00000460698|ODF2L', 'nc|ENSG00000122417|Q9ULJ1-5|ODF2L'] 72718 9341 MNEYNYLK True PC9_epitope_Rep3 1073.48518162317 1073.48408993586 40.87 2 -1.4177040337293332 0.4066853022010289 1.0 ['nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENSG00000230453|ENST00000684830|ANKRD18B'] 67604 5345 LSVKEDAK True NCI_RA007_Epitope_Rep4 888.4916469025999 888.49054993586 27.125 2 -1.4177245872085507 0.4066853022010289 1.0 ['ENSG00000135549|ENST00000368452|PKIB', 'nc|ENSG00000135549|Q9C010-2|PKIB'] 1755 11078 AEGRLVKAQY True H1975_Epitope_Rep3 1133.61930702721 1133.61820993586 47.705 2 -1.4177631736608605 0.4066853022010289 1.0 ['ENSG00000197380|ENST00000391916|DACT3'] 7706 13669 ASMSNWNYR True PC9_epitope_Rep5 1127.48182757823 1127.48017490379 57.603 3 -1.4177634588864176 0.4066853022010289 1.0 ['ENST00000518942.1_1_8:52812321-52859098:+|nuORF'] 28780 17354 FSTFTITRL True PC9_epitope_Rep1 1084.59169529704 1084.5905899358602 71.563 2 -1.4177644665048754 0.4066853022010289 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000469423.1_1_19:12757436-12758173:-|nuORF'] 67683 18994 LSWEYRLP True PC9_epitope_Rep2 1062.5498304850598 1062.5487299358601 78.427 2 -1.4177752920153075 0.4066853022010289 1.0 ['ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 91086 18886 RFMRYLIV True NCI_RA007_Epitope_Rep1 1096.62155595668 1096.62044993586 77.606 2 -1.417808650452101 0.4066853022010289 1.0 ['PRDM5|p.K303Sfs*24|1|0.21|ENSG00000138738|chr4:120811407-120811407|T/-|frameshift_variant'] 98477 12914 SFILWWCF True PC9_epitope_Rep4 1100.5153595526401 1100.51426993586 57.559 2 -1.4180033346489882 0.406741441071114 1.0 ['ENST00000361360.3_2_2:105473593-105473881:+|nuORF'] 40922 16776 HSRWSWRRKRQ True H1975_Epitope_Rep1 1581.85014386409 1581.8490499358602 69.929 2 -1.4180203161792413 0.406741441071114 1.0 ['ENST00000496846.1_1_7:30411132-30411270:+|nuORF'] 47446 14056 IVMFLVVM True PC9_epitope_Rep5 950.5333181158999 950.53222993586 59.08 2 -1.4180317318806044 0.406741441071114 1.0 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B'] 121740 18595 VFLSTRQVL True PC9_epitope_Rep6 1061.62332977849 1061.62222993586 84.169 2 -1.4180682430264266 0.40674323562570464 1.0 ['ENST00000531310.1_1_8:145745109-145745647:+|nuORF', 'LRRC14|p.E374Vfs*15|1|0.18|ENSG00000160959|chr8:144521115-144521118|TGAG/-|frameshift_variant', 'ENSG00000160959|ENST00000292524|LRRC14'] 69128 10636 LTRLLEFY True H1975_Epitope_Rep3 1053.5858816406098 1053.58478993586 45.985 2 -1.4181078958987263 0.40674323562570464 1.0 ['ENSG00000168434|ENST00000307149|COG7'] 127558 16600 VNSEEIVRLL True PC9_epitope_Rep3 1170.66083748602 1170.65920490379 68.989 3 -1.418147135589718 0.40674323562570464 1.0 ['ENSG00000127412|ENST00000265310|TRPV5', 'TRPV5|p.N197Tfs*58|1|0.43|ENSG00000127412|chr7:142928863-142928863|T/-|frameshift_variant', 'nc|ENSG00000127412|Q9NQA5-2|TRPV5', 'ENSG00000165125|ENST00000359396|TRPV6', 'TRPV6|p.R615Sfs*43|1|0.34|ENSG00000165125|chr7:142872424-142872425|-/A|frameshift_variant'] 91104 16819 RFREMLRWFLV True H1975_Epitope_Rep1 1551.8496583985498 1551.8480249037898 70.103 3 -1.418208408278626 0.40674323562570464 1.0 ['nc|ENSG00000141867|O60885-3|BRD4'] 36886 18064 GVLLVRPSL True PC9_epitope_Rep1 952.6069514383599 952.60584993586 74.276 2 -1.4182716059808542 0.40674323562570464 1.0 ['FGFR1|p.R448L|1|0.17|ENSG00000077782|chr8:38418315-38418315|C/A|missense_variant'] 97635 22529 SEFMNYKA True NCI_RA007_Epitope_Rep5 988.4324177743199 988.43132993586 93.839 2 -1.4182737319779557 0.40674323562570464 1.0 ['ENST00000443945.6_1_13:47127426-47279607:+|nuORF', 'nc|ENSG00000136141|Q9Y2L9-2|LRCH1', 'nc|ENSG00000136141|Q9Y2L9|LRCH1', 'ENSG00000136141|ENST00000389797|LRCH1'] 124152 9845 VGSSKGRP True PC9_epitope_Rep2 786.4348007328199 786.43370993586 43.203 2 -1.41834038764086 0.40674323562570464 1.0 ['nc|ENSG00000113108|O95704-3|APBB3'] 27516 11547 FMQFIQLVP True H1975_Epitope_Rep1 1121.5943381493298 1121.59324993586 49.401 2 -1.4183816712003892 0.4067523926956726 1.0 ['PIK3C3|p.S687L|1|0.12|ENSG00000078142|chr18:42040698-42040698|C/T|missense_variant'] 37648 17909 GVWNAVTKHW True PC9_epitope_Rep2 1196.60907669668 1196.6079699358602 74.192 2 -1.418416373800938 0.4067523926956726 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 43025 22926 IETLSGKKR True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 92.985 2 -1.418446607744069 0.4067523926956726 1.0 ['chr10:5004014-5005970|127|116.13|0.0|23.47|-|2|TE_info:L1M4c,L1M4c_dup2264,L1,LINE,donor,+,5005970,5006355|AKR1C2,None|5'] 98758 20628 SGHFFFST True NCI_RA007_Epitope_Rep5 928.40791727864 928.40682993586 86.29 2 -1.4185419545422708 0.4067780687436147 1.0 ['ENST00000368715.5_1_1:153516097-153516238:-|nuORF'] 34281 21230 GNWILHRQDL True PC9_epitope_Rep2 1250.65200413782 1250.65090993586 87.12 2 -1.4186400524678278 0.4067780687436147 1.0 ['ENST00000602591.1_1_6:30256646-30256907:-|nuORF'] 108908 6079 TAASIPDYRG True NCI_RA007_Epitope_Rep3 1049.51417325233 1049.5130699358601 30.895 2 -1.4187061735319693 0.4067850348763475 1.0 ['ENSG00000187531|ENST00000328666|SIRT7', 'nc|ENSG00000187531|Q9NRC8-3|SIRT7', 'nc|ENSG00000187531|Q9NRC8-2|SIRT7', 'ENST00000571832.5_1_17:79873246-79876007:-|nuORF'] 74302 14224 NELDRYHRIIE True PC9_epitope_Rep6 1456.7422756941999 1456.7411699358602 66.6 2 -1.4187633507602078 0.4067872240488492 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 22203 7900 ESVTSVTEL True PC9_epitope_Rep1 963.47605640811 963.47494993586 35.212 2 -1.418768888337176 0.4067872240488492 1.0 ['ENSG00000108510|ENST00000397786|MED13'] 58435 9861 LEPFRLQHN True NCI_RA007_Epitope_Rep1 1152.60399131624 1152.60288993586 42.36 2 -1.4189585208247066 0.4068176747572246 1.0 ['ZMIZ2|p.I602Sfs*60|1|0.21|ENSG00000122515|chr7:44763353-44763353|C/-|frameshift_variant', 'nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2', 'ENST00000478045.5_1_7:44799906-44801193:+|nuORF', 'ENST00000463056.5_1_7:44799906-44807219:+|nuORF'] 83910 5617 PVPVHPGGP True PC9_epitope_Rep4 855.4602872046698 855.45918993586 28.403 2 -1.4191032243878332 0.4068385702879151 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 13414 12884 DLYYVRFTEWL True H1975_Epitope_Rep1 1503.7398160827097 1503.73870993586 54.629 2 -1.4191174366168509 0.4068385702879151 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 131082 10289 VTDTGRYLCM-[Oxidation] True H1975_Epitope_Rep2 1173.51583050889 1173.51472993586 44.582 2 -1.419147416142872 0.4068385702879151 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant'] 10465 18590 CILPEGKG True H1975_Epitope_Rep3 815.4211248146299 815.4205749679301 77.964 1 -1.4191609188008667 0.4068455351376739 1.0 ['THSD7A|p.V979G|1|0.28|ENSG00000005108|chr7:11446189-11446189|A/C|missense_variant'] 126084 15475 VLELDLSDMPL True PC9_epitope_Rep3 1243.63699080695 1243.6358899358602 64.676 2 -1.419200371743218 0.4068524998238734 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 128142 22002 VPLNIRLFL True PC9_epitope_Rep5 1083.68045073179 1083.67934993586 89.656 2 -1.4193034131370896 0.40688991170392635 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant'] 97227 5189 SDYSFSVIAMS True PC9_epitope_Rep5 1205.52744035797 1205.52634993586 24.976 2 -1.4193053863781828 0.40688991170392635 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 57416 6859 LEASLYQPLY True H1975_Epitope_Rep3 1195.61249031127 1195.6113899358602 31.341 2 -1.4194176451738658 0.4068968756237598 1.0 ['OR56A5|p.H59Y|1|0.15|ENSG00000188691|chr11:5968320-5968320|G/A|missense_variant'] 17729 17611 EHQKKVRKM True NCI_RA007_Epitope_Rep5 1182.6655460269797 1182.66391490379 74.523 3 -1.4194473377822012 0.4069038393800634 1.0 ['EID3|p.R185Q|1|0.29|ENSG00000255150|chr12:104304488-104304488|G/A|missense_variant', 'ENSG00000255150|ENST00000527879|EID3'] 27415 9081 FLWQHGEE True PC9_epitope_Rep3 1044.4664947839199 1044.46538993586 39.869 2 -1.4195152254323782 0.40693647047773357 1.0 ['ENSG00000092439|ENST00000646667|TRPM7'] 106867 11035 SVCLSIISML True PC9_epitope_Rep1 1064.56098941572 1064.5598899358602 47.334 2 -1.4195239105274318 0.40693647047773357 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF', 'ENST00000519277.5_1_8:74708911-74722861:-|nuORF', 'ENST00000519255.2_1_8:74708126-74722861:-|nuORF', 'ENSG00000104343|ENST00000602593|UBE2W', 'nc|ENSG00000104343|Q96B02-2|UBE2W', 'nc|ENSG00000104343|Q96B02-3|UBE2W'] 58896 21928 LETCRLMVS True PC9_epitope_Rep3 1050.5201872328998 1050.5190899358602 89.647 2 -1.41956464471525 0.40693647047773357 1.0 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000489079.1_1_7:87840172-87856229:-|nuORF', 'ENST00000488015.5_1_7:87840172-87849341:-|nuORF'] 122792 15930 VGGPNGGK True NCI_RA007_Epitope_Rep4 684.35548778296 684.35493496793 69.143 1 -1.4196693956512476 0.40696213677722337 1.0 ['ENSG00000111676|ENST00000396684|ATN1', 'ATN1|p.M371Hfs*9|1|0.25|ENSG00000111676|chr12:6936371-6936372|-/C|frameshift_variant'] 81177 24782 PKGKPLAL True PC9_epitope_Rep4 822.5327238689399 822.53217496793 103.83 1 -1.419697558554075 0.40696213677722337 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 125294 23358 VIMNKVLRF True PC9_epitope_Rep3 1118.66342076866 1118.66232993586 95.125 2 -1.4198286194860843 0.4069878018713972 1.0 ['MROH9|p.I146M|1|0.2|ENSG00000117501|chr1:170965213-170965213|C/G|missense_variant'] 133474 5241 VWAKDRIKQ True NCI_RA007_Epitope_Rep4 1142.6560268890998 1142.65438490379 26.698 3 -1.4199274798321 0.4069878018713972 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.G1002E|1|0.33|ENSG00000198838|chr15:33633086-33633086|G/A|missense_variant', 'RYR3|p.E1995Gfs*98|1|0.07|ENSG00000198838|chr15:33696336-33696337|-/G|frameshift_variant'] 10878 6860 CWWRYWWHYPI True NCI_RA007_Epitope_Rep1 1694.76050904098 1694.75887490379 30.688 3 -1.4200162594484367 0.4070065040268614 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 52860 11338 KPEQMLYRFRY True H1975_Epitope_Rep1 1529.78130405521 1529.78020993586 48.59 2 -1.4200946208686254 0.4070252057431996 1.0 ['ENSG00000046889|ENST00000288368|PREX2', 'ENST00000517617.1_1_8:68864752-69023167:+|nuORF', 'nc|ENSG00000046889|Q70Z35-3|PREX2', 'ENST00000529398.5_1_8:68864629-69017594:+|nuORF', 'nc|ENSG00000046889|Q70Z35-4|PREX2'] 20523 22352 EPPKILVYSL True PC9_epitope_Rep4 1157.66961126457 1157.66797490379 94.213 3 -1.4201490932533485 0.4070273887369249 1.0 ['FAM47C|p.S532Y|1|0.84|ENSG00000198173|chrX:37010005-37010005|C/A|missense_variant'] 91503 25663 RHVHLRGTR True PC9_epitope_Rep1 1130.6533415504998 1130.65224993586 103.75 2 -1.4201902731344094 0.4070273887369249 1.0 ['ENST00000233336.6_1_2:113239851-113239944:+|nuORF'] 35489 11987 GSLPAPSSL True PC9_epitope_Rep5 827.43888305375 827.43833496793 51.104 1 -1.4202158192595256 0.40703434998004273 1.0 ['ENST00000396884.6_1_22:38368385-38368778:-|nuORF'] 80422 21625 PGKLEHSKAA True PC9_epitope_Rep6 1036.5665431783598 1036.5654499358602 96.064 2 -1.4202326895884394 0.4070530504912952 1.0 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B'] 28380 9315 FRWLYEKFRYP True NCI_RA007_Epitope_Rep2 1603.8299684997899 1603.82833490379 40.841 3 -1.4203562299657115 0.4070552327287668 1.0 ['ENSG00000167904|ENST00000434581|TMEM68'] 20035 14923 EMDINPGSPDS True H1975_Epitope_Rep2 1160.4655683774 1160.46446993586 62.555 2 -1.4204007598196582 0.4070552327287668 1.0 ['ENST00000462126.5_1_19:35996627-36001120:-|nuORF'] 81169 25443 PKGKPLAL True H1975_Epitope_Rep2 822.5327238689399 822.53217496793 104.47 1 -1.42049183882368 0.40706219331815086 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 38621 14917 HFFFLWKL True NCI_RA007_Epitope_Rep5 1136.61712219924 1136.61602993586 64.045 2 -1.4205992255065683 0.40709263150480707 1.0 ['ENST00000360409.7_1_2:206659803-206659965:+|nuORF'] 97215 4576 SDYSFSVIAMS True NCI_RA007_Epitope_Rep2 1205.52744035797 1205.52634993586 22.426 2 -1.4206941043051915 0.40709481271056125 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 81171 25273 PKGKPLAL True NCI_RA007_Epitope_Rep5 822.5327238689399 822.53217496793 104.75 1 -1.4207023795350682 0.40709481271056125 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 22840 22795 EVANRVSKV True PC9_epitope_Rep1 1000.5665431783599 1000.56544993586 92.492 2 -1.4207550205084971 0.407120470472233 1.0 ['ENSG00000183098|ENST00000377047|GPC6'] 65760 13634 LSDDREEL True PC9_epitope_Rep3 975.4509042894299 975.44980993586 57.509 2 -1.4207625206551007 0.407120470472233 1.0 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1'] 81884 17806 PLRPRRPN True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 73.81 2 -1.4207980819894013 0.407139167996995 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|17|1|sense'] 131371 9888 VTGYFTFTLY True NCI_RA007_Epitope_Rep2 1210.5910265907 1210.58992993586 43.09 2 -1.4208487197415036 0.407157865082812 1.0 ['ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11'] 108477 6615 SYMFILVAI True PC9_epitope_Rep2 1055.5725400755898 1055.57144993586 30.855 2 -1.4210363352663737 0.4072000375613306 1.0 ['ENSG00000150261|ENST00000279783|OR8K1'] 95615 2657 RYAFFRKDSWY True NCI_RA007_Epitope_Rep5 1537.74663279865 1537.74499490379 14.909 3 -1.4211856364796063 0.40723960656353436 1.0 ['ENSG00000179148|ENST00000448843|ALOXE3', 'nc|ENSG00000179148|Q9BYJ1-2|ALOXE3'] 135319 23069 WGDFQDGL True NCI_RA007_Epitope_Rep5 936.3977465177599 936.39664993586 95.982 2 -1.421192405736856 0.40723960656353436 1.0 ['ENST00000261772.12_1_16:70316640-70323405:-|nuORF'] 33563 10946 GLERNPGL True PC9_epitope_Rep2 854.4610154806599 854.45990993586 47.424 2 -1.4211929383211352 0.40723960656353436 1.0 ['DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant'] 2740 8717 AETELQRAA True H1975_Epitope_Rep1 987.4985231881899 987.4974299358599 38.458 2 -1.4212035515043526 0.40723960656353436 1.0 ['nc|ENSG00000188343|A1XBS5-4|CIBAR1', 'nc|ENSG00000188343|A1XBS5-3|CIBAR1', 'ENSG00000188343|ENST00000518322|CIBAR1', 'nc|ENSG00000188343|A1XBS5-2|CIBAR1'] 61719 11961 LLAARLLEAP True H1975_Epitope_Rep3 1065.65462990677 1065.6535299358602 51.166 2 -1.4212648952910822 0.40724656392680664 1.0 ['ENSG00000235098|ENST00000537107|ANKRD65'] 79841 14529 PEHKYPSLH True PC9_epitope_Rep3 1106.55089311422 1106.5497899358602 61.007 2 -1.4213466107966817 0.4072487412119576 1.0 ['POU4F1|p.G71Afs*15|1|0.7|ENSG00000152192|chr13:78602463-78602463|C/-|frameshift_variant', 'ENSG00000152192|ENST00000377208|POU4F1'] 122346 15881 VGDEIREI True PC9_epitope_Rep2 929.4818104948899 929.48070993586 66.341 2 -1.421381413998243 0.4072487412119576 1.0 ['nc|ENSG00000147044|O14936-3|CASK', 'nc|ENSG00000147044|O14936-4|CASK', 'nc|ENSG00000147044|O14936-6|CASK', 'nc|ENSG00000147044|O14936-2|CASK', 'ENSG00000147044|ENST00000378163|CASK', 'nc|ENSG00000147044|O14936-5|CASK', 'ENST00000472704.1_1_X:41411986-41437658:-|nuORF'] 142011 15390 YVKVKVEL True PC9_epitope_Rep4 976.5957180483198 976.59462993586 67.13 2 -1.4216028051330143 0.407257875217126 1.0 ['NTNG2|p.P56L|1|0.4|ENSG00000196358|chr9:132166998-132166998|C/T|missense_variant'] 120865 9635 VEMHHWCIP True PC9_epitope_Rep4 1150.5052058751 1150.50410993586 44.686 2 -1.4216245057443242 0.407257875217126 1.0 ['ENSG00000198400|ENST00000524377|NTRK1', 'nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'PRCC-NTRK1|1|fusion', 'ENST00000530298.5_1_1:156807654-156845592:+|nuORF'] 30924 7451 GAQVQQVVN True PC9_epitope_Rep5 941.4930438849299 941.49194993586 33.614 2 -1.421653475892178 0.407257875217126 1.0 ['ENSG00000183020|ENST00000448903|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENST00000531497.1_1_11:1007968-1008136:+|nuORF'] 109564 8740 TDVEVDWLCL True PC9_epitope_Rep1 1191.5481758025498 1191.54652490379 38.457 3 -1.42168022900029 0.4072600521090064 1.0 ['SPEG|p.R1004L|1|0.17|ENSG00000072195|chr2:219467303-219467303|G/T|missense_variant'] 118659 5869 TYSRNERWEY True H1975_Epitope_Rep1 1402.62657723562 1402.62548993586 27.643 2 -1.4217045559269754 0.4072600521090064 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 69751 7019 LVFLLWGSY True H1975_Epitope_Rep3 1096.59571804832 1096.5946299358602 31.961 2 -1.421767183637264 0.4072787447040736 1.0 ['ENSG00000076248|ENST00000242576|UNG', 'nc|ENSG00000076248|P13051-2|UNG'] 132289 8406 VTWKPPLI True PC9_epitope_Rep1 952.5745886809198 952.57348993586 37.17 2 -1.4218240443205452 0.4072974368603887 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant'] 80225 3906 PGAHHFMSEYL True NCI_RA007_Epitope_Rep2 1287.57064258263 1287.56954993586 19.828 2 -1.4218681535854814 0.4073104904951889 1.0 ['ENSG00000105085|ENST00000263390|MED26'] 111368 20548 THRRVRLHRH True NCI_RA007_Epitope_Rep3 1366.79190071198 1366.7908099358601 89.505 2 -1.4218863632075411 0.4073104904951889 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 132711 11666 VVHHRIHTG True PC9_epitope_Rep5 1054.57844527474 1054.57787496793 49.869 1 -1.421914127553505 0.4073104904951889 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 119755 13804 VAYHLLYKRMW True H1975_Epitope_Rep1 1478.7856611596599 1478.7845699358602 58.243 2 -1.4219658783300009 0.4073104904951889 1.0 ['ENST00000508970.1_1_2:79924974-80004158:+|nuORF'] 124216 6006 VGTEQTDRRW True NCI_RA007_Epitope_Rep2 1246.60544786822 1246.60434993586 27.971 2 -1.4219910037020662 0.4073104904951889 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3', 'ENSG00000274600|ENST00000620804|RIMBP3B', 'ENSG00000183246|ENST00000433039|RIMBP3C'] 66748 13236 LSLLGVLGSG True PC9_epitope_Rep2 914.54368247546 914.54258993586 56.189 2 -1.4220006538708294 0.4073104904951889 1.0 ['ENST00000449111.5_1_X:149108908-149110531:+|nuORF'] 67145 13986 LSQRHKLQPRV True NCI_RA007_Epitope_Rep2 1360.8051507342798 1360.8040499358601 59.059 2 -1.4221318396265568 0.4073104904951889 1.0 ['DCDC1|p.V715Wfs*20|1|0.2|ENSG00000170959|chr11:30894319-30894319|C/-|frameshift_variant', 'DCDC1|p.M747Ifs*23|1|0.21|ENSG00000170959|chr11:30892971-30892972|-/A|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.K188Sfs*8|1|0.14|ENSG00000170959|chr11:30920827-30920827|T/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8-2|DCDC1', 'nc|ENSG00000170959|M0R2J8-3|DCDC1'] 45123 19913 IPLVKNWYR True H1975_Epitope_Rep2 1187.68151336095 1187.68040993586 82.581 2 -1.4221870607204954 0.4073104904951889 1.0 ['ENSG00000174231|ENST00000304992|PRPF8'] 69140 10118 LTRPVPFSSPQ True H1975_Epitope_Rep1 1227.66117183919 1227.66006993586 43.855 2 -1.4222825514848823 0.4073104904951889 1.0 ['ENST00000498154.5_1_3:71630834-71631062:-|nuORF'] 31099 14510 GAVGEVLRQI True PC9_epitope_Rep3 1040.5978433066398 1040.59674993586 60.934 2 -1.42232179997681 0.4073104904951889 1.0 ['ENSG00000066739|ENST00000359933|ATG2B'] 65118 576 LQMNKEDKVW True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 3.1337 3 -1.4223485782220049 0.4073104904951889 1.0 ['nc|ENSG00000112701|Q9GZR1-2|SENP6', 'ENSG00000112701|ENST00000447266|SENP6'] 37333 11315 GVSEYELP True H1975_Epitope_Rep2 892.4178132559999 892.41726496793 48.57 1 -1.4223643085018396 0.4073104904951889 1.0 ['nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'FGFR2|p.L776Pfs*8|1|0.06|ENSG00000066468|chr10:121479996-121479997|-/GAGG|frameshift_variant', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF', 'nc|ENSG00000077782|P11362-12|FGFR1', 'nc|ENSG00000077782|P11362-8|FGFR1', 'nc|ENSG00000077782|P11362-9|FGFR1', 'nc|ENSG00000077782|P11362-10|FGFR1', 'nc|ENSG00000077782|P11362-11|FGFR1', 'nc|ENSG00000077782|P11362-13|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1'] 121902 12102 VFRGPRAEAL True H1975_Epitope_Rep3 1114.6247267608198 1114.6236299358602 51.716 2 -1.4224204846681197 0.4073126657435873 1.0 ['ENST00000246553.3_1_19:35843468-35843927:+|nuORF'] 28669 16624 FSNSNRHEI True PC9_epitope_Rep6 1102.5155702346601 1102.51446993586 76.409 2 -1.4224225804711963 0.4073126657435873 1.0 ['nc|ENSG00000105750|Q03923-2|ZNF85', 'ENSG00000105750|ENST00000328178|ZNF85'] 92691 3012 RNRLMRDMAQ True PC9_epitope_Rep1 1289.6444933125701 1289.6428349037901 16.326 3 -1.4224322798864006 0.40732874944265834 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 130243 8817 VSFNGGKSVI True NCI_RA007_Epitope_Rep5 1006.5447451046199 1006.54364993586 40.58 2 -1.4225069977554785 0.40732874944265834 1.0 ['nc|ENSG00000163297|P58335|ANTXR2', 'ENSG00000163297|ENST00000403729|ANTXR2'] 133059 26311 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 107.03 2 -1.4225315895836697 0.40732874944265834 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 83350 9394 PTEVDTVETPI True NCI_RA007_Epitope_Rep1 1199.59214878951 1199.5910499358602 40.533 2 -1.422536429809309 0.40732874944265834 1.0 ['ENSG00000109991|ENST00000263314|P2RX3'] 63582 23109 LMFAPLHP True PC9_epitope_Rep6 924.4891448047999 924.48804993586 101.99 2 -1.4225943041478653 0.40733570347425113 1.0 ['ENST00000432854.5_1_7:44103291-44103480:+|nuORF'] 117632 11324 TVTISCKS True H1975_Epitope_Rep3 837.4266041178901 837.4260549679301 48.666 1 -1.4227786591435028 0.40735656458993313 1.0 ['CON__Q05B55'] 5034 24968 ALISFNKRTLV True PC9_epitope_Rep5 1260.7554065772 1260.75376490379 101.21 3 -1.4228066199867329 0.40735656458993313 1.0 ['nc|ENSG00000159921|Q9Y223-4|GNE', 'nc|ENSG00000159921|Q9Y223-3|GNE', 'ENSG00000159921|ENST00000642385|GNE', 'nc|ENSG00000159921|Q9Y223-2|GNE'] 75373 25379 NISVPGLQ True PC9_epitope_Rep2 826.45486747106 826.45376993586 103.3 2 -1.4228599774176374 0.40735656458993313 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF', 'nc|ENSG00000131023|O95835-2|LATS1'] 44190 23440 IIYLKKPM True PC9_epitope_Rep2 1004.60925993748 1004.60816993586 95.633 2 -1.4229317184116634 0.40736351796881415 1.0 ['ENST00000480294.1_1_6:10891760-10930631:+|nuORF', 'ENSG00000153157|ENST00000283141|SYCP2L'] 19227 22633 ELIREVYEYWI True PC9_epitope_Rep5 1511.76603083055 1511.7649299358602 92.058 2 -1.4230692295159701 0.40738872333935566 1.0 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32581422-32635732:-|nuORF'] 128506 19288 VPSQDKMEIR True PC9_epitope_Rep1 1201.61250739461 1201.6114099358601 78.995 2 -1.4231138036736244 0.40738872333935566 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 27593 8676 FNNSEYHL True PC9_epitope_Rep6 1022.4457593393402 1022.4446699358599 43.218 2 -1.423119808143761 0.40738872333935566 1.0 ['ENSG00000090402|ENST00000264382|SI'] 60210 10026 LGPPPLTV True NCI_RA007_Epitope_Rep2 792.4745402864801 792.47344993586 43.603 2 -1.4231270452958606 0.40738872333935566 1.0 ['ENST00000564098.5_1_16:1794388-1794685:+|nuORF'] 116641 7950 TVAQSNLRWKF True NCI_RA007_Epitope_Rep5 1348.7251690780797 1348.7240699358601 37.269 2 -1.423175031919927 0.40738872333935566 1.0 ['ENST00000359015.4_1_6:136878860-136878899:-|nuORF'] 39404 11091 HKQVWWQEYQR True NCI_RA007_Epitope_Rep1 1586.77424452882 1586.7731499358601 47.14 2 -1.423210447050193 0.40738872333935566 1.0 ['ENSG00000153237|ENST00000283233|CCDC148', 'nc|ENSG00000153237|Q8NFR7-3|CCDC148', 'CCDC148|p.T283Yfs*16|1|0.48|ENSG00000153237|chr2:158313812-158313813|-/A|frameshift_variant', 'ENST00000451554.1_1_2:159145303-159312956:-|nuORF'] 92042 8697 RKSDLIKHQRI True NCI_RA007_Epitope_Rep5 1392.83136548212 1392.82972490379 40.119 3 -1.4232551643094344 0.40738872333935566 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A', 'ENST00000452075.7_1_10:43015418-43015709:-|nuORF'] 127597 12066 VNVLLSKVL True PC9_epitope_Rep2 983.63791721347 983.63682993586 51.725 2 -1.4233277545080547 0.4074026278742374 1.0 ['ENST00000303115.7_1_5:35878241-35878331:+|nuORF'] 111244 4039 THKYLDSEEDE True NCI_RA007_Epitope_Rep2 1364.5732042500797 1364.57210993586 20.348 2 -1.4233523719872372 0.4074026278742374 1.0 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 122433 5373 VGDVLQTH True PC9_epitope_Rep1 867.4450310633501 867.44392993586 25.503 2 -1.4234104377296979 0.407416096754138 1.0 ['ENST00000525402.5_1_11:67275470-67275692:-|nuORF', 'ENST00000301488.7_1_11:67275099-67275692:-|nuORF'] 112362 18145 TLALGRPVI True PC9_epitope_Rep1 938.5913013742199 938.59020993586 74.585 2 -1.4234704911882334 0.407416096754138 1.0 ['ENST00000507522.1_1_5:253163-256532:+|nuORF'] 130506 20374 VSQAWRHSL True PC9_epitope_Rep4 1082.56212650426 1082.56102993586 86.513 2 -1.4235728947355697 0.407416096754138 1.0 ['CHST5|p.A358S|1|0.12|ENSG00000135702|chr16:75529313-75529313|C/A|missense_variant'] 31082 5893 GAVAGAPK True NCI_RA007_Epitope_Rep2 669.38097425481 669.38042496793 27.538 1 -1.4235817559715407 0.407416096754138 1.0 ['ENSG00000132688|ENST00000368223|NES'] 60442 14180 LGVLREGL True PC9_epitope_Rep2 855.5178020807899 855.51670993586 59.811 2 -1.4236055014501916 0.407416096754138 1.0 ['ENSG00000146909|ENST00000275820|NOM1'] 81251 17242 PKLRELLII True H1975_Epitope_Rep3 1093.7223155437698 1093.7217749679298 71.963 1 -1.4236149108882803 0.407416096754138 1.0 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 48077 9659 IYMLSNNIL True PC9_epitope_Rep6 1079.56851732431 1079.56740993586 47.515 2 -1.423669592351353 0.407416096754138 1.0 ['TRPM8|p.T967N|1|0.12|ENSG00000144481|chr2:233985826-233985826|C/A|missense_variant'] 36843 23191 GVLHTKFWVV True PC9_epitope_Rep2 1184.6706143240801 1184.6700749679298 94.686 1 -1.4237009964630862 0.407429999178876 1.0 ['ENSG00000105223|ENST00000409735|PLD3', 'ENST00000480030.1_1_19:40875835-40876255:+|nuORF'] 36751 11566 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 51.437 2 -1.4237215090065067 0.407429999178876 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 111369 21086 THRRVRLHRH True NCI_RA007_Epitope_Rep4 1366.79190071198 1366.7908099358601 91.423 2 -1.4237745911997515 0.407432170883626 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 28301 840 FRRCWLVFK True H1975_Epitope_Rep1 1253.6855531955696 1253.68390490379 4.4123 3 -1.4237892934731282 0.407432170883626 1.0 ['ENSG00000206052|ENST00000382713|DOK6'] 132599 5597 VVFASASIG True PC9_epitope_Rep1 849.45961849833 849.45852993586 26.357 2 -1.4239116131179157 0.4074508515929245 1.0 ['SLC17A9|p.L348Pfs*42|1|0.29|ENSG00000101194|chr20:62965707-62965707|T/-|frameshift_variant', 'nc|ENSG00000101194|Q9BYT1-2|SLC17A9', 'ENSG00000101194|ENST00000370351|SLC17A9', 'ENST00000488738.5_1_20:61595350-61598131:+|nuORF'] 98562 14601 SFQNLGIQCV True PC9_epitope_Rep5 1107.5382798251899 1107.5371899358602 61.164 2 -1.4240073725515858 0.40745302273207124 1.0 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA'] 19184 15349 ELHRQERLRNH True NCI_RA007_Epitope_Rep4 1486.78654054802 1486.78544993586 66.708 2 -1.4240227132380743 0.40745302273207124 1.0 ['ZFYVE1|p.T267Pfs*45|1|0.05|ENSG00000165861|chr14:72997975-72998000|TCGTTATGCAGCCGGTCTGCATGAGT/-|frameshift_variant', 'nc|ENSG00000165861|Q9HBF4-3|ZFYVE1', 'ENSG00000165861|ENST00000556143|ZFYVE1'] 127542 10088 VNQVFLRLN True PC9_epitope_Rep4 1101.6294777880898 1101.62838993586 46.475 2 -1.4240973379645767 0.4074717025394405 1.0 ['nc|ENSG00000189050|Q5M7Z0-3|RNFT1'] 64017 12541 LPAAPPVP True PC9_epitope_Rep1 760.44832553864 760.44722993586 53.109 2 -1.4241208130428469 0.40747387311305816 1.0 ['ENST00000358600.7_1_19:14492051-14492228:+|nuORF'] 131544 14006 VTLALAPI True NCI_RA007_Epitope_Rep1 796.50584041476 796.50474993586 58.507 2 -1.4241213069113292 0.40747387311305816 1.0 ['nc|ENSG00000139626|P26010-2|ITGB7', 'ENSG00000139626|ENST00000267082|ITGB7'] 55180 9573 LAARQVPV True PC9_epitope_Rep5 852.5181364339599 852.51702993586 41.783 2 -1.4242529908276613 0.40748994264669663 1.0 ['ENST00000533614.5_1_1:249151936-249153183:-|nuORF', 'ENST00000496411.5_1_1:249152123-249153213:-|nuORF', 'ENST00000483791.6_1_1:249152025-249153300:-|nuORF', 'ENST00000470787.6_1_1:249150751-249153213:-|nuORF', 'ENST00000412341.6_1_1:249150017-249153213:-|nuORF'] 104591 23002 SQRIQRPGR True PC9_epitope_Rep5 1096.62137271588 1096.62026993586 93.468 2 -1.4243648023679572 0.40748994264669663 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 120256 14517 VECYHLKKNM True NCI_RA007_Epitope_Rep2 1263.61039921963 1263.6093099358602 61.131 2 -1.4243773449325972 0.40748994264669663 1.0 ['ENST00000422653.1_1_9:88371036-88385349:+|nuORF'] 7365 20739 ARRRNRRRLF True H1975_Epitope_Rep2 1399.84974994127 1399.84810490379 85.878 3 -1.424401097041622 0.40748994264669663 1.0 ['ENSG00000168421|ENST00000381799|RHOH'] 136697 11133 WWWSWRWWKLQ True NCI_RA007_Epitope_Rep1 1746.85718630714 1746.8560899358602 47.304 2 -1.424447754736782 0.4075203490417771 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 115015 21687 TRARELNQ True PC9_epitope_Rep4 986.5257409955398 986.52464993586 91.621 2 -1.4246098845740265 0.40754597485456934 1.0 ['ENSG00000132744|ENST00000255082|ACY3'] 109236 23932 TARRKVRLEP True PC9_epitope_Rep3 1224.7414878485597 1224.74038993586 97.34 2 -1.4246171450207317 0.40754597485456934 1.0 ['ENSG00000131584|ENST00000354700|ACAP3', 'nc|ENSG00000131584|Q96P50-4|ACAP3', 'ENST00000467278.5_1_1:1228946-1234134:-|nuORF', 'nc|ENSG00000131584|Q96P50-1|ACAP3'] 133417 23056 VVVSDRRL True PC9_epitope_Rep2 942.5610638751 942.55996993586 94.178 2 -1.4246972097413761 0.40755681684921546 1.0 ['ENSG00000144589|ENST00000456909|STK11IP'] 126385 22294 VLKKKKKKKK True H1975_Epitope_Rep2 1254.92274668582 1254.9211049037901 92.133 3 -1.424822035317708 0.40755681684921546 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 34621 10690 GPWRAGGT True PC9_epitope_Rep6 800.3929359208398 800.39182993586 51.933 2 -1.4248503321452928 0.40755681684921546 1.0 ['ENST00000252136.11_2_22:20104501-20104702:-|nuORF'] 72465 10132 MKVRIFLKK True NCI_RA007_Epitope_Rep5 1161.74200544253 1161.7403549037901 45.608 3 -1.4248626152999733 0.40755681684921546 1.0 ['SCARB2|p.I353Mfs*29|1|0.06|ENSG00000138760|chr4:76169921-76169922|-/TTAAAAATATCCTTACTTTCATATAC|frameshift_variant'] 55252 13278 LADLLLPV True PC9_epitope_Rep1 852.5320551625999 852.53094993586 55.938 2 -1.4249159031080054 0.40755681684921546 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 5519 17934 ALYNSKQL True PC9_epitope_Rep2 935.5076313199099 935.50652993586 74.289 2 -1.4249371140559617 0.40755681684921546 1.0 ['nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1', 'ENST00000490299.5_1_1:213246316-213302929:+|nuORF', 'RPS6KC1|p.A243Pfs*11|1|0.08|ENSG00000136643|chr1:213129779-213129780|-/GCCTAGAAATATGATCACAATAGTAAACAGAT|frameshift_variant', 'RPS6KC1-CD34|3|fusion', 'RPS6KC1-CD34|1|fusion', 'RPS6KC1-CD34|4|fusion', 'RPS6KC1-CD34|2|fusion'] 123001 7652 VGIFTPNNSS True NCI_RA007_Epitope_Rep2 1034.50327421546 1034.5021699358601 34.39 2 -1.42502575852201 0.40755681684921546 1.0 ['ENST00000602308.1_1_1:228584351-228584825:-|nuORF', 'nc|ENSG00000154370|Q96F44-2|TRIM11'] 96389 16482 RYYADIRQTVP True PC9_epitope_Rep2 1380.7149983171998 1380.71390993586 68.639 2 -1.4250316220678938 0.40755681684921546 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'ENST00000485535.5_1_3:48445895-48454598:-|nuORF'] 37376 13060 GVSLAGPAAL True PC9_epitope_Rep5 854.48616759934 854.48506993586 55.241 2 -1.4250690067882945 0.40755681684921546 1.0 99088 20021 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 83.929 2 -1.4250819437853293 0.40755681684921546 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 100750 7593 SLEAFFLYGR True NCI_RA007_Epitope_Rep1 1201.6131590176099 1201.61152490379 33.528 3 -1.4251267409389126 0.4075659321974272 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 129380 7633 VRDTQAVRHYK True H1975_Epitope_Rep1 1371.7371307441101 1371.7360299358602 34.346 2 -1.4251849997889292 0.4075659321974272 1.0 ['ENSG00000101213|ENST00000542869|PTK6'] 43166 16256 IFFFFFFWDR True NCI_RA007_Epitope_Rep1 1470.7124791360598 1470.71138993586 67.341 2 -1.4252762427999568 0.4075659321974272 1.0 ['ENST00000267205.6_1_12:122216327-122216612:-|nuORF'] 49553 18885 KFLKKLNHREL True PC9_epitope_Rep2 1424.86160298124 1424.8599449037902 78.007 3 -1.425488913339744 0.4075681000011726 1.0 ['ENST00000377325.1_1_6:28056349-28056487:+|nuORF'] 127234 11732 VLWQRAQVPD True NCI_RA007_Epitope_Rep1 1210.6458561282197 1210.64474993586 49.61 2 -1.4255009529455485 0.4075681000011726 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF'] 74296 7280 NEKYRLVV True PC9_epitope_Rep2 1019.5763795860698 1019.57528993586 33.39 2 -1.4255404960606055 0.4075702677032399 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'nc|ENSG00000150054|Q5T2T1-2|MPP7'] 37956 9765 HADHHPHPH True PC9_epitope_Rep2 1083.4747084821902 1083.4736099358602 42.9 2 -1.4255523853943415 0.4075702677032399 1.0 ['ENSG00000184486|ENST00000328345|POU3F2', 'nc|ENSG00000184486|P20265-3|POU3F2', 'nc|ENSG00000184486|P20265-2|POU3F2'] 91514 7579 RHWWLRGWCRR True NCI_RA007_Epitope_Rep2 1610.8265719685396 1610.8254699358602 34.108 2 -1.42560016870146 0.4075889402218522 1.0 ['ENST00000473038.5_1_1:46033610-46035625:+|nuORF'] 11101 25090 DCQFRHPQV True NCI_RA007_Epitope_Rep3 1128.51346205968 1128.51181490379 108.45 3 -1.4256368215288806 0.4075958866362581 1.0 ['ENST00000598766.1_1_19:42822030-42825243:+|nuORF', 'ENST00000301204.7_1_19:42822030-42827838:+|nuORF'] 53653 19009 KSCRSFSRNW True PC9_epitope_Rep5 1269.6036740464099 1269.6025699358602 78.144 2 -1.4256815829617249 0.4076023871777134 1.0 ['ENST00000533345.5_1_11:12499469-12518028:+|nuORF'] 98895 11503 SGWAMRNTNNH True NCI_RA007_Epitope_Rep5 1286.5574521299802 1286.55580490379 50.896 3 -1.4257129724849766 0.4076023871777134 1.0 ['ENSG00000124827|ENST00000379491|GCM2'] 39792 4967 HMHELQEWRAY True NCI_RA007_Epitope_Rep2 1498.67756726266 1498.67646993586 23.942 2 -1.4257983331552277 0.4076023871777134 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB'] 44379 16567 ILETLDALVDP True PC9_epitope_Rep6 1197.6492697428098 1197.64816993586 76.165 2 -1.4257992743350938 0.4076023871777134 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2', 'ENST00000483634.1_1_6:24408642-24418827:+|nuORF'] 60365 6181 LGSVSYGLF True H1975_Epitope_Rep3 941.4858332461698 941.48472993586 28.786 2 -1.4258689545217715 0.4076023871777134 1.0 ['PCDHB4|p.F273L|1|0.24|ENSG00000081818|chr5:141122817-141122817|C/A|missense_variant'] 10965 12362 DAIRAHRAGRK True NCI_RA007_Epitope_Rep2 1249.7115847026096 1249.71048993586 52.691 2 -1.425895980919788 0.4076023871777134 1.0 ['ENST00000491136.6_1_1:52823963-52826194:-|nuORF', 'ENST00000460261.5_1_1:52822810-52825784:-|nuORF', 'nc|ENSG00000154222|Q5T0F9-3|CC2D1B', 'ENSG00000154222|ENST00000284376|CC2D1B', 'nc|ENSG00000154222|Q5T0F9|CC2D1B'] 30396 12376 GAEGGMLHTF True PC9_epitope_Rep1 1018.4542158480599 1018.45310993586 52.463 2 -1.4259707082629562 0.4076045538216225 1.0 ['ENSG00000140057|ENST00000267584|AK7'] 53769 10341 KSVPLATA True H1975_Epitope_Rep1 785.46470387877 785.4641549679301 44.724 1 -1.4260167953904042 0.4076045538216225 1.0 ['ENSG00000181789|ENST00000314797|COPG1'] 86857 12466 QLQQQNLEHL True H1975_Epitope_Rep1 1249.64149902377 1249.6404099358601 52.988 2 -1.426198422740455 0.407646672607044 1.0 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8', 'SCAF8|p.L679*|1|0.2|ENSG00000213079|chr6:154824338-154824338|T/-|frameshift_variant'] 133366 11674 VVVGKVLLI True NCI_RA007_Epitope_Rep5 938.6528390016199 938.65174993586 51.558 2 -1.4263208101841856 0.40770051469639945 1.0 ['nc|ENSG00000211452|P49895-8|DIO1', 'nc|ENSG00000211452|P49895-9|DIO1', 'nc|ENSG00000211452|P49895-3|DIO1', 'nc|ENSG00000211452|P49895-7|DIO1', 'nc|ENSG00000211452|P49895-5|DIO1', 'nc|ENSG00000211452|P49895-2|DIO1', 'nc|ENSG00000211452|P49895-4|DIO1', 'ENSG00000211452|ENST00000361921|DIO1'] 10664 24655 CPQRRKKPRL True NCI_RA007_Epitope_Rep1 1280.7611777473198 1280.7600899358602 102.1 2 -1.4263471717255307 0.40770745890683985 1.0 ['ENST00000526269.2_1_11:128561788-128562594:-|nuORF'] 113122 8269 TLPDGSRLQL True H1975_Epitope_Rep3 1098.6033226099 1098.6022299358601 36.788 2 -1.4266636808142554 0.4077630067290333 1.0 ['ENSG00000124827|ENST00000379491|GCM2'] 53542 23509 KRMSVYVILV True PC9_epitope_Rep5 1206.7158502643401 1206.71419490379 95.409 3 -1.4266808640619453 0.4077630067290333 1.0 ['ENSG00000249961|ENST00000433154|TERB1', 'nc|ENSG00000249961|Q8NA31-3|TERB1', 'nc|ENSG00000249961|Q8NA31-2|TERB1'] 11478 10553 DFFSRLVEIEP True NCI_RA007_Epitope_Rep1 1350.68196685342 1350.68086993586 45.033 2 -1.4267370657505536 0.4077630067290333 1.0 ['ENSG00000155961|ENST00000369454|RAB39B'] 91364 13613 RHCLVNMETS True NCI_RA007_Epitope_Rep5 1188.53796255536 1188.53632490379 59.049 3 -1.4267580337833912 0.4077630067290333 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 63581 23443 LMFAPLHP True NCI_RA007_Epitope_Rep3 924.4891448047999 924.48804993586 101.76 2 -1.426777641421528 0.4077630067290333 1.0 ['ENST00000432854.5_1_7:44103291-44103480:+|nuORF'] 84759 5988 QDTQSRPWAP True NCI_RA007_Epitope_Rep1 1184.5574350466397 1184.55632993586 27.336 2 -1.42679500956737 0.4077630067290333 1.0 ['ENST00000219837.11_2_16:19726253-19729517:-|nuORF'] 24634 22767 FAIYLITM True PC9_epitope_Rep2 970.51977622674 970.51866993586 93.067 2 -1.4268230867722134 0.4077630067290333 1.0 ['ENSG00000206536|ENST00000383695|OR5K3', 'OR5K3|p.L254Pfs*25|1|0.29|ENSG00000206536|chr3:98391426-98391426|T/-|frameshift_variant'] 45215 14146 IPSFLTKEVFI True H1975_Epitope_Rep1 1292.7380251775598 1292.7369299358602 59.585 2 -1.426824219779355 0.4077630067290333 1.0 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF'] 65789 12591 LSDIFLIYL True H1975_Epitope_Rep3 1095.62159844299 1095.6205099358601 53.634 2 -1.4270700234365523 0.40786373281127275 1.0 ['ENST00000570088.1_1_16:85936621-85936909:+|nuORF'] 97211 4414 SDYSFSVIAMS True NCI_RA007_Epitope_Rep1 1205.52744035797 1205.52634993586 21.282 2 -1.4271204391802155 0.4078823970739942 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 141523 11977 YTLLNQAPD True NCI_RA007_Epitope_Rep4 1033.50802524273 1033.50747496793 53.073 1 -1.427245497379614 0.4078962792769559 1.0 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000518726.5_1_5:151166169-151166277:+|nuORF'] 64483 22837 LPQHLSHFVF True PC9_epitope_Rep2 1223.6451278522302 1223.64402993586 93.332 2 -1.42726535505119 0.4078962792769559 1.0 ['ENSG00000197892|ENST00000524189|KIF13B'] 118557 13897 TYQRHYRNVFH True H1975_Epitope_Rep3 1519.74327875371 1519.74218993586 58.767 2 -1.4272770316891175 0.40790322013433833 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 93645 22442 RQRFLCLRRW True PC9_epitope_Rep6 1432.7986258851997 1432.7975299358602 99.319 2 -1.4272906616875427 0.40792188305903315 1.0 ['ENST00000466292.1_1_3:119033568-119041517:-|nuORF'] 87411 15613 QPWRWQRRRGW True NCI_RA007_Epitope_Rep2 1610.8443302076598 1610.84322993586 65.444 2 -1.4273552215600553 0.4079405455461909 1.0 ['ENST00000513117.1_1_5:6633573-6668378:+|nuORF'] 139661 21408 YMVTHSGD True NCI_RA007_Epitope_Rep5 908.3698175177599 908.36872993586 89.407 2 -1.4273993523406212 0.40794748564060485 1.0 ['ENSG00000177599|ENST00000323169|ZNF491'] 98120 8510 SESGRVLQIS True PC9_epitope_Rep1 1074.56693710118 1074.5658499358601 37.571 2 -1.4275831293770482 0.40796614739013726 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF', 'nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 21569 22113 ERQENTGSL True NCI_RA007_Epitope_Rep4 1032.4836014000398 1032.4825099358602 95.902 2 -1.4275871094165018 0.40797308702175544 1.0 ['ENSG00000106246|ENST00000292478|PTCD1'] 61303 12245 LIQLRALCHQ True NCI_RA007_Epitope_Rep1 1193.6702970542499 1193.66918993586 51.599 2 -1.4276072405789817 0.4079800264906872 1.0 ['ENSG00000198315|ENST00000330236|ZKSCAN8', 'nc|ENSG00000198315|Q15776-2|ZKSCAN8', 'ZKSCAN8|p.W79L|1|0.51|ENSG00000198315|chr6:28148643-28148643|G/T|missense_variant'] 112842 12613 TLIVGKAL True PC9_epitope_Rep2 813.53238951577 813.53128993586 53.827 2 -1.4276157281216963 0.4079869657969384 1.0 ['ENSG00000160055|ENST00000309777|TMEM234', 'nc|ENSG00000160055|Q8WY98|TMEM234', 'nc|ENSG00000160055|Q8WY98-2|TMEM234', 'ENST00000485689.1_1_1:32682456-32683010:-|nuORF'] 8490 7138 ATRVSQEYPV True NCI_RA007_Epitope_Rep5 1148.5825871653199 1148.5814899358602 34.132 2 -1.4277494732004918 0.4079939049405146 1.0 ['CPS1|p.H1162Y|1|0.29|ENSG00000021826|chr2:210654028-210654028|C/T|missense_variant'] 836 5655 ADAEAWYQT True H1975_Epitope_Rep2 1053.4403396057298 1053.43924993586 26.749 2 -1.4277621397098033 0.40799606174619363 1.0 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0'] 71547 16232 MAPSWYLEY True PC9_epitope_Rep3 1158.50558271458 1158.50392490379 67.575 3 -1.4277724677282768 0.40799606174619363 1.0 ['nc|ENSG00000187243|Q96JG8-4|MAGED4'] 72182 20296 MGNIQEIL True PC9_epitope_Rep6 916.46880328304 916.46770993586 90.773 2 -1.427799267148451 0.4080025315565557 1.0 ['PPARA|p.S38L|1|0.9|ENSG00000186951|chr22:46198496-46198496|C/T|missense_variant'] 74413 14735 NESLREQLL True PC9_epitope_Rep5 1100.5825871653199 1100.5814899358602 61.677 2 -1.4278340202667201 0.4080025315565557 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1', 'ENST00000558070.1_1_15:31352716-31354937:-|nuORF'] 4402 8747 AIPDDQGW True NCI_RA007_Epitope_Rep1 900.39774651776 900.39664993586 38.026 2 -1.4278550046533438 0.4080025315565557 1.0 ['nc|ENSG00000188747|Q86UR1-2|NOXA1', 'ENSG00000188747|ENST00000683555|NOXA1'] 19384 10709 ELLSLPPPDV True H1975_Epitope_Rep1 1078.5910265907 1078.58992993586 46.151 2 -1.4278779557019987 0.4080025315565557 1.0 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF'] 30830 9317 GAPELNGG True NCI_RA007_Epitope_Rep5 713.3344179852099 713.33386496793 42.481 1 -1.4278813116806954 0.4080025315565557 1.0 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 48785 17753 KDLPWPPP True PC9_epitope_Rep4 948.5069030439199 948.50580993586 76.31 2 -1.4278816091825524 0.4080025315565557 1.0 ['ENSG00000138606|ENST00000690270|SHF', 'nc|ENSG00000138606|Q7M4L6|SHF'] 22475 5502 ETFFSHLGI True PC9_epitope_Rep4 1049.5181960036098 1049.5170899358602 27.922 2 -1.4279352916904129 0.4080329098495148 1.0 ['ENSG00000174206|ENST00000398055|KICS2', 'ENST00000540673.1_1_12:64615457-64616017:-|nuORF'] 129526 25592 VRKRRVRPGVF True PC9_epitope_Rep4 1368.85785501348 1368.85674993586 107.6 2 -1.4280113838214734 0.40804631376639205 1.0 ['ENST00000416255.5_1_2:101179854-101179926:+|nuORF'] 58823 15193 LESQKERL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 63.261 2 -1.4280597886655808 0.40804631376639205 1.0 ['nc|ENSG00000205629|Q9UIC8-2|LCMT1', 'ENST00000572869.1_1_16:25162908-25186269:+|nuORF', 'nc|ENSG00000205629|Q9UIC8-3|LCMT1', 'ENSG00000205629|ENST00000399069|LCMT1'] 52372 5313 KKKVIPAPKPK True PC9_epitope_Rep1 1232.8332629750796 1232.83216993586 25.277 2 -1.4280914962399511 0.40804631376639205 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'nc|ENSG00000157741|Q6ZU65-2|UBN2'] 112171 4312 TKERHQEC True PC9_epitope_Rep2 1029.4661775140898 1029.46508993586 21.924 2 -1.428131783776451 0.40804631376639205 1.0 ['nc|ENSG00000275111|Q9BSG1-3|ZNF2', 'nc|ENSG00000275111|Q9BSG1-4|ZNF2', 'ENSG00000275111|ENST00000614034|ZNF2'] 29961 15424 FWLSFQKWNKF True NCI_RA007_Epitope_Rep1 1529.7819556782094 1529.78084993586 64.077 2 -1.4281472378698494 0.40804631376639205 1.0 ['ENST00000415861.2_1_6:109689555-109689642:-|nuORF'] 83403 9124 PTKTSGVP True H1975_Epitope_Rep3 785.4283183700499 785.4277649679301 40.084 1 -1.4281527202040476 0.40804631376639205 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 3849 16672 AGVSFALL True PC9_epitope_Rep1 776.4432401582 776.44214993586 68.958 2 -1.4282560684751968 0.40804631376639205 1.0 ['GABRA4|p.E90*|1|0.2|ENSG00000109158|chr4:46979036-46979037|-/A|frameshift_variant', 'ENSG00000109158|ENST00000264318|GABRA4'] 8258 5469 ATGTIGTLLSA True NCI_RA007_Epitope_Rep5 1003.55497543515 1003.55386993586 27.722 2 -1.4282716432676552 0.40805325083204425 1.0 ['UTS2R|p.G122Afs*11|1|0.43|ENSG00000181408|chr17:82374687-82374687|G/-|frameshift_variant', 'ENSG00000181408|ENST00000313135|UTS2R'] 85104 5893 QELDSWYVI True NCI_RA007_Epitope_Rep1 1151.54989005471 1151.5487899358602 26.973 2 -1.4283050117505074 0.4080601877351083 1.0 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'RAPGEF6|p.D770Tfs*7|1|0.48|ENSG00000158987|chr5:131464213-131464213|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6', 'ENST00000514179.5_1_5:130834202-130867847:-|nuORF'] 19128 10465 ELGPGVKA True H1975_Epitope_Rep1 769.43340375049 769.4328549679301 45.208 1 -1.4283290816683096 0.40806712447559 1.0 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1'] 101894 13469 SLPSGSHQGP True PC9_epitope_Rep5 965.45665837621 965.45556993586 56.826 2 -1.428378634921326 0.40807406105349503 1.0 ['ENST00000474729.5_1_1:167734818-167757155:+|nuORF', 'nc|ENSG00000197965|O95297-2|MPZL1', 'ENSG00000197965|ENST00000359523|MPZL1', 'nc|ENSG00000197965|O95297-4|MPZL1'] 59685 6556 LGAPERPEHLL True NCI_RA007_Epitope_Rep4 1230.67207087606 1230.67096993586 31.83 2 -1.4284709937816278 0.40809271585262963 1.0 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'ENST00000538884.1_1_17:38334521-38337576:+|nuORF'] 82339 25283 PPKPLRPRQL True H1975_Epitope_Rep2 1200.74551059984 1200.7438649037902 103.85 3 -1.4285709804328286 0.4081113702145611 1.0 ['nc|ENSG00000175920|Q18PE1-2|DOK7', 'DOK7|p.L413Wfs*43|1|0.25|ENSG00000175920|chr4:3493222-3493222|C/-|frameshift_variant', 'ENSG00000175920|ENST00000340083|DOK7', 'nc|ENSG00000175920|Q18PE1-3|DOK7'] 20453 14213 EPHHRLLL True PC9_epitope_Rep3 1013.5770482924099 1013.57594993586 59.757 2 -1.4285855934237452 0.408118306030139 1.0 ['ENST00000427063.6_1_10:29698519-29709436:+|nuORF', 'ENST00000608994.5_1_10:29698519-29707148:+|nuORF', 'ENST00000414457.5_1_10:29698519-29771805:+|nuORF', 'ENST00000413405.5_1_10:29698519-29776229:+|nuORF'] 26063 13583 FGKGYGKN True PC9_epitope_Rep1 869.4395517600899 869.43844993586 57.103 2 -1.4286135858388187 0.4081252416831695 1.0 ['ENSG00000070915|ENST00000563236|SLC12A3', 'nc|ENSG00000070915|P55017-3|SLC12A3', 'nc|ENSG00000070915|P55017-2|SLC12A3'] 139341 23208 YLLLGAIH True H1975_Epitope_Rep3 898.5276384885001 898.52654993586 96.906 2 -1.4286234757036627 0.4081321771736583 1.0 ['nc|ENSG00000168234|Q8N584-2|TTC39C', 'ENSG00000168234|ENST00000317571|TTC39C'] 56306 10663 LDASDEFLKER True NCI_RA007_Epitope_Rep1 1321.65139500113 1321.6502899358602 45.466 2 -1.4287193814807688 0.40813911250161117 1.0 ['ENSG00000140057|ENST00000267584|AK7'] 15810 15516 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 66.38 2 -1.428764653916684 0.4081577652269691 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 135799 11544 WNDKVKEALR True PC9_epitope_Rep3 1257.6829699129298 1257.68131490379 49.415 3 -1.4289254046093378 0.40825843947365337 1.0 ['OR9A2|p.R289W|2|0.19|ENSG00000179468|chr7:143026268-143026268|G/A|missense_variant'] 55198 8706 LACGACGK True NCI_RA007_Epitope_Rep2 721.32511625481 721.3245649679301 38.512 1 -1.4290125267698994 0.40829574081668524 1.0 ['ENSG00000136367|ENST00000419474|ZFHX2'] 93446 5323 RQGVEEML True H1975_Epitope_Rep3 960.4698659121999 960.46876993586 25.548 2 -1.4290164824200502 0.40829574081668524 1.0 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 57659 4404 LEEERREEEE True H1975_Epitope_Rep3 1346.59500232382 1346.5939099358602 22.06 2 -1.4290878201845496 0.4083026738218546 1.0 ['nc|ENSG00000203880|Q9NV79-2|PCMTD2', 'ENSG00000203880|ENST00000308824|PCMTD2', 'nc|ENSG00000203880|Q9NV79-3|PCMTD2', 'ENST00000266078.7_1_20:62903543-62904950:+|nuORF'] 85130 14019 QELQITDRI True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 59.2 2 -1.4291651745098213 0.40834475728496605 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.S3870Vfs*5|1|0.22|ENSG00000155657|chr2:178740674-178740674|T/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 64476 9690 LPQDTFIQF True PC9_epitope_Rep5 1107.5600608155898 1107.5589699358602 42.24 2 -1.4292537950870154 0.40837512302573 1.0 ['nc|ENSG00000170266|P16278-3|GLB1', 'nc|ENSG00000170266|P16278|GLB1', 'ENSG00000170266|ENST00000307363|GLB1', 'nc|ENSG00000170266|P16278-2|GLB1'] 66490 6112 LSHEEHPH True H1975_Epitope_Rep2 984.44134266524 984.44024993586 28.489 2 -1.42932334173176 0.40839377145602174 1.0 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 53845 26217 KTGKKGKG True PC9_epitope_Rep5 802.5024863698198 802.50138993586 106.6 2 -1.4294586142258086 0.4084119266592467 1.0 ['ENSG00000137077|ENST00000259607|CCL21'] 17045 12546 EGEWEPPP True H1975_Epitope_Rep2 939.3974121645898 939.39630993586 53.353 2 -1.4295340110780461 0.4084119266592467 1.0 ['ENST00000308302.3_1_1:204167444-204167576:-|nuORF'] 31116 11933 GAVPPPSPG True H1975_Epitope_Rep1 777.40210362221 777.4015549679301 50.904 1 -1.4295663386995123 0.4084119266592467 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 62344 15102 LLGISTHPE True PC9_epitope_Rep5 965.5181960036101 965.51708993586 63.096 2 -1.4296289201295005 0.4084119266592467 1.0 ['OR1Q1|p.Y266Ifs*49|1|0.13|ENSG00000165202|chr9:122615532-122615533|-/A|frameshift_variant', 'ENSG00000165202|ENST00000297913|OR1Q1'] 23155 11619 EVKVKCVL True NCI_RA007_Epitope_Rep5 916.5415743004799 916.54046993586 51.345 2 -1.4296357568126201 0.4084119266592467 1.0 ['ENST00000397766.3_1_15:34394281-34394365:+|nuORF'] 126139 23293 VLFASSHT True NCI_RA007_Epitope_Rep3 860.43921740692 860.43812993586 101.17 2 -1.4296395396714885 0.4084119266592467 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 19124 7953 ELGPAHRHLKT True NCI_RA007_Epitope_Rep1 1257.69420330297 1257.69256490379 34.929 3 -1.4297666444513097 0.4084540044050799 1.0 ['ENST00000564098.5_1_16:1794388-1794685:+|nuORF'] 62984 11032 LLPNDQLYQP True PC9_epitope_Rep6 1199.61863832087 1199.61700490379 53.34 3 -1.4298385577334969 0.4084843656642103 1.0 ['ENSG00000160654|ENST00000532917|CD3G'] 83743 16699 PVGWSPGL True PC9_epitope_Rep5 811.4228390667898 811.42174993586 69.237 2 -1.4299543620236106 0.40850036902098147 1.0 ['SRCAP|p.G3147W|1|0.19|ENSG00000080603|chr16:30739479-30739479|G/T|missense_variant'] 109511 6124 TDPRCKEMRQL True H1975_Epitope_Rep1 1375.6700393540698 1375.6689499358602 28.626 2 -1.4299607720049305 0.40850036902098147 1.0 ['ENST00000367959.6_1_1:161676930-161676990:+|nuORF'] 123423 12572 VGNGKGAA True NCI_RA007_Epitope_Rep3 672.3554877829599 672.35493496793 56.691 1 -1.430017811771273 0.40850036902098147 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 86098 19773 QHTKIRPKDV True NCI_RA007_Epitope_Rep5 1220.69895433024 1220.6978499358602 82.967 2 -1.4300191002256755 0.40850036902098147 1.0 ['NF1|p.N2421Tfs*11|1|0.39|ENSG00000196712|chr17:31349191-31349191|A/-|frameshift_variant', 'ENSG00000196712|ENST00000358273|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'nc|ENSG00000196712|P21359-2|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.F2197Cfs*44|1|0.25|ENSG00000196712|chr17:31337528-31337529|TT/-|frameshift_variant', 'NF1|p.P1951Hfs*6|1|0.17|ENSG00000196712|chr17:31334876-31334876|C/-|frameshift_variant', 'NF1|p.E1929Sfs*13|1|0.24|ENSG00000196712|chr17:31330469-31330469|A/-|frameshift_variant', 'ENST00000493220.5_2_17:29556858-29657521:+|nuORF'] 36752 11787 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 52.312 2 -1.4301667978792276 0.40851901314402195 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 3441 9045 AGKKKGLP True NCI_RA007_Epitope_Rep5 797.5123227775298 797.51122993586 41.45 2 -1.4302463417858566 0.4085376568302426 1.0 ['ENST00000370223.7_2_10:102767131-102767407:+|nuORF'] 91143 5618 RFWSLQDLT True NCI_RA007_Epitope_Rep1 1164.5927579261997 1164.5916699358602 25.915 2 -1.4303061594317628 0.4085397996837111 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-4|RREB1'] 43992 24649 IIFIKLNL True PC9_epitope_Rep4 972.6371889374799 972.63608993586 103.31 2 -1.4303149401994002 0.4085397996837111 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 84478 21523 QAKRHIHQHRQ True NCI_RA007_Epitope_Rep2 1437.78139559793 1437.78028993586 89.092 2 -1.430400836454018 0.408546227641705 1.0 ['nc|ENSG00000054523|O60333-3|KIF1B'] 121106 8788 VERHRSVMA True H1975_Epitope_Rep1 1083.56074660527 1083.55964993586 38.731 2 -1.4304646911136125 0.408546227641705 1.0 ['ENSG00000064547|ENST00000407877|LPAR2'] 120404 8249 VEELYSHMD True PC9_epitope_Rep3 1121.46992548185 1121.4688299358602 36.706 2 -1.4305039144374125 0.408546227641705 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'LAMA3-ZNF521|1|fusion', 'LAMA3-ZNF521|2|fusion', 'ENSG00000198795|ENST00000361524|ZNF521', 'ZNF521|p.R991Gfs*14|1|0.4|ENSG00000198795|chr18:25224947-25224947|G/-|frameshift_variant'] 87323 23084 QPRHRSGRRM True H1975_Epitope_Rep1 1279.6792390285098 1279.6781499358601 95.991 2 -1.4305331332041031 0.408546227641705 1.0 ['ENSG00000169594|ENST00000345382|BNC1', 'BNC1|p.G225Efs*13|1|0.15|ENSG00000169594|chr15:83264577-83264577|C/-|frameshift_variant'] 83402 12951 PTKSFISTWWK True NCI_RA007_Epitope_Rep2 1379.7237720957498 1379.72266993586 54.998 2 -1.4305386775576159 0.408546227641705 1.0 ['nc|ENSG00000105976|P08581-2|MET'] 45588 9617 IQTGVQLAPA True NCI_RA007_Epitope_Rep4 996.5603951687599 996.55928993586 43.842 2 -1.4305604071064513 0.408546227641705 1.0 ['nc|ENSG00000290942|Q86YQ2|BPIFA4P'] 20191 5412 ENIAREVEGK True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 25.845 2 -1.4306216503473506 0.40857179670387594 1.0 ['ENSG00000153147|ENST00000283131|SMARCA5'] 39360 21838 HKEKLWFVP True PC9_epitope_Rep1 1182.6549642599398 1182.65332490379 88.809 3 -1.4306333527762958 0.40857179670387594 1.0 ['ENSG00000115594|ENST00000410023|IL1R1'] 56768 10254 LDLRWPVAR True NCI_RA007_Epitope_Rep2 1124.6454622053998 1124.6443699358601 44.479 2 -1.4306992585006393 0.40859043736969103 1.0 ['ENST00000476287.3_1_6:170626618-170626705:+|nuORF'] 136175 22181 WRRRQRQRGL True NCI_RA007_Epitope_Rep2 1410.8181154598199 1410.8164649037901 92.086 3 -1.4307419532612677 0.408597364568082 1.0 ['ENST00000370272.8_1_1:93811500-93811869:+|nuORF'] 94846 13335 RSTLVVLEWEH True H1975_Epitope_Rep3 1367.71974934447 1367.7186499358602 56.554 2 -1.4309001228456937 0.40861600449775115 1.0 ['ASTN1|p.S1035R|1|0.43|ENSG00000152092|chr1:176884460-176884460|G/T|missense_variant'] 10237 7783 CCCPCCGG True PC9_epitope_Rep2 744.15217989724 744.15162496793 35.311 1 -1.4310643709722364 0.4086415704279791 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 57466 12004 LECRRFKR True NCI_RA007_Epitope_Rep2 1106.6131165312997 1106.6120099358602 51.284 2 -1.4311155461817682 0.4086415704279791 1.0 ['ENSG00000160551|ENST00000261716|TAOK1'] 5346 17288 ALRPVLILG True PC9_epitope_Rep6 950.6276868829399 950.62713496793 79.104 1 -1.4311603396031392 0.4086484967029363 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79553706-79569486:-|nuORF'] 10238 8146 CCCPCCGG True PC9_epitope_Rep3 744.15217989724 744.15162496793 36.313 1 -1.4313043974464592 0.40867884750527056 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 66967 9872 LSPDSTKEL True H1975_Epitope_Rep2 988.50769088956 988.50658993586 42.96 2 -1.4313231116611052 0.40869748538902095 1.0 ['nc|ENSG00000171777|Q8TDF6-9|RASGRP4'] 36042 12536 GVAAAGHA True NCI_RA007_Epitope_Rep3 652.3292730351201 652.32872496793 56.544 1 -1.4314346662545137 0.4087134742636294 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 66647 9152 LSKPTPRP True H1975_Epitope_Rep3 894.5287011176599 894.52760993586 40.193 2 -1.4314384118629075 0.4087134742636294 1.0 ['ENST00000335997.11_1_X:129199166-129199613:-|nuORF'] 142027 11336 YVLILKTILS True NCI_RA007_Epitope_Rep4 1161.73729690157 1161.73564490379 50.505 3 -1.4314752049284472 0.4087134742636294 1.0 ['OR51B5|p.V223I|1|0.06|ENSG00000167355|chr11:5342858-5342858|C/T|missense_variant', 'OR51A7|p.M260Ifs*13|1|0.26|ENSG00000176895|chr11:4908149-4908149|G/-|frameshift_variant', 'ENSG00000176895|ENST00000641490|OR51A7'] 91235 17459 RGGGCSPH True NCI_RA007_Epitope_Rep5 769.32895576529 769.32840496793 73.941 1 -1.431483717398385 0.4087134742636294 1.0 ['nc|ENSG00000221955|A0AV02-3|SLC12A8'] 71557 22477 MARCIRERD True H1975_Epitope_Rep2 1148.5542813258398 1148.55318993586 92.877 2 -1.4316050377556089 0.4087555336940482 1.0 ['ENST00000565149.5_1_16:88718935-88722722:-|nuORF', 'ENSG00000167508|ENST00000301012|MVD'] 110647 20845 TFWFFFQRHKL True NCI_RA007_Epitope_Rep1 1555.8088391323897 1555.80774993586 85.315 2 -1.4316297043540693 0.4087624579854076 1.0 ['ENSG00000174567|ENST00000308302|GOLT1A'] 18693 11302 ELAGWGSP True NCI_RA007_Epitope_Rep5 815.38136817763 815.3808149679301 50.119 1 -1.4316946725455684 0.40876459497124923 1.0 ['ENST00000477812.1_1_7:5569027-5569288:-|nuORF'] 20516 8498 EPPAAASR True PC9_epitope_Rep1 797.4031662513701 797.40206993586 37.522 2 -1.431704543342637 0.40876459497124923 1.0 ['nc|nan|Q7Z7L8|C11orf96'] 100212 9539 SIVTMLMLML True PC9_epitope_Rep3 1150.61639611686 1150.6147349037901 41.638 3 -1.4317796454666152 0.40877151891322167 1.0 ['ENSG00000163527|ENST00000295770|STT3B'] 89972 11007 RDGDRLWYENP True PC9_epitope_Rep2 1419.6531263366296 1419.6520299358601 47.66 2 -1.43201819883578 0.40879015352906045 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 82559 21188 PPTSHFHVL True PC9_epitope_Rep2 1033.5345147740898 1033.5334099358602 86.955 2 -1.432068160053521 0.40882742145140705 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2', 'ENST00000549209.5_1_12:56565201-56568439:-|nuORF', 'ENST00000552931.1_1_12:56566100-56568508:-|nuORF'] 89677 7407 QYWNQKLIRSE True NCI_RA007_Epitope_Rep3 1463.7521121019097 1463.75047490379 36.261 3 -1.432084536688822 0.40882742145140705 1.0 ['ENST00000506400.1_1_5:64906824-64920129:-|nuORF'] 47741 11926 IYDYVMHSL True NCI_RA007_Epitope_Rep2 1139.53213181559 1139.53102993586 50.994 2 -1.4322186199715865 0.4088460547579455 1.0 ['nc|ENSG00000004948|P30988-3|CALCR', 'nc|ENSG00000004948|P30988-4|CALCR', 'ENSG00000004948|ENST00000426151|CALCR', 'nc|ENSG00000004948|P30988-1|CALCR', 'ENST00000423724.5_1_7:93055670-93072938:-|nuORF'] 104596 23894 SQRLRRQPE True PC9_epitope_Rep5 1168.64250208328 1168.64140993586 96.889 2 -1.4324141816477391 0.4089349493530066 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 39508 19282 HLELGWHK True PC9_epitope_Rep6 1018.5348491272599 1018.53374993586 86.815 2 -1.4325242585043112 0.40895092448389325 1.0 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-4|SPTBN4', 'nc|ENSG00000160460|Q9H254-2|SPTBN4', 'SPTBN4|p.E1997Dfs*2|1|0.29|ENSG00000160460|chr19:40565498-40565498|G/-|frameshift_variant'] 89975 11462 RDGDRLWYENP True PC9_epitope_Rep5 1419.6531263366296 1419.6520299358601 49.087 2 -1.432550468073961 0.40895092448389325 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 19536 13415 ELPSFAVKG True H1975_Epitope_Rep2 946.5123823471798 946.51128993586 56.736 2 -1.4325764082220107 0.40895092448389325 1.0 ['SPEF2|p.D1760Tfs*2|1|0.1|ENSG00000152582|chr5:35807152-35807152|G/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2', 'SPEF2|p.T939Yfs*14|1|0.13|ENSG00000152582|chr5:35709093-35709094|-/C|frameshift_variant', 'ENST00000503074.1_1_5:35659153-35697983:+|nuORF'] 4986 5329 ALHAQRPP True H1975_Epitope_Rep3 888.49298431528 888.49188993586 25.57 2 -1.4325764207652902 0.40895092448389325 1.0 ['ENST00000307145.3_2_15:31664327-31664516:+|nuORF'] 124243 3366 VGTGTSKR True NCI_RA007_Epitope_Rep2 804.44536541652 804.44426993586 17.751 2 -1.4326018542368126 0.4089530567557757 1.0 ['ENST00000369626.7_1_1:113471960-113498795:-|nuORF'] 45843 11895 ISDNAARVL True PC9_epitope_Rep5 957.52434401321 957.52324993586 50.751 2 -1.4326049570632813 0.4089530567557757 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 17827 18868 EHTLAQLMQ True PC9_epitope_Rep1 1069.52262976105 1069.5215299358601 77.361 2 -1.4327977775398295 0.40900681482869256 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'AEBP2-PLEKHA5|3|fusion', 'AEBP2-PLEKHA5|2|fusion'] 25455 13582 FEEKHRRDF True H1975_Epitope_Rep3 1262.6156186290998 1262.6145299358602 57.526 2 -1.4329194386135549 0.409072280833226 1.0 ['ENST00000396060.6_1_15:59931232-59931334:-|nuORF'] 131977 14187 VTSFIRFWLFW True H1975_Epitope_Rep2 1500.79179208592 1500.7906899358602 59.722 2 -1.4330136993399372 0.4091494543581097 1.0 ['ENST00000484027.1_1_1:155108806-155110754:+|nuORF', 'ENST00000368405.7_1_1:155108359-155110754:+|nuORF', 'nc|ENSG00000169241|Q9BRV3-2|SLC50A1', 'nc|ENSG00000169241|Q9BRV3-3|SLC50A1', 'ENSG00000169241|ENST00000368404|SLC50A1'] 135299 23131 WFWKLVPARYR True PC9_epitope_Rep6 1520.8404736138398 1520.83936993586 102.07 2 -1.4331402480044921 0.4091984169730464 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 36331 7171 GVEMQPWEI True PC9_epitope_Rep5 1087.50083168731 1087.4997299358602 32.55 2 -1.4331968533267412 0.4091984169730464 1.0 ['ENST00000379484.9_1_X:21901709-21902018:+|nuORF'] 15666 17300 EATLVALL True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 73.32 2 -1.4332263185430592 0.4092026694766421 1.0 ['nc|ENSG00000132437|P20711-3|DDC', 'ENSG00000132437|ENST00000444124|DDC', 'DDC|p.A219Rfs*16|1|0.16|ENSG00000132437|chr7:50528197-50528197|A/-|frameshift_variant', 'DDC|p.F215Lfs*35|1|0.14|ENSG00000132437|chr7:50528199-50528206|GCATGGCG/-|frameshift_variant', 'nc|ENSG00000132437|P20711-2|DDC'] 28381 6192 FRWLYEKFRYP True NCI_RA007_Epitope_Rep2 1603.8299684997899 1603.82833490379 28.693 3 -1.4332883775221508 0.4092026694766421 1.0 ['ENSG00000167904|ENST00000434581|TMEM68'] 18315 10514 EISESRVPI True H1975_Epitope_Rep1 1028.5502244078798 1028.54912993586 45.394 2 -1.433298232647182 0.4092026694766421 1.0 ['nc|ENSG00000116514|Q6ZMZ0-3|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0-2|RNF19B', 'ENSG00000116514|ENST00000235150|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0|RNF19B'] 85536 13049 QGAVGPEV True PC9_epitope_Rep5 755.38136817763 755.3808149679301 55.197 1 -1.4333175165945526 0.4092026694766421 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 124032 21090 VGSGQAAVP True PC9_epitope_Rep2 784.40791727864 784.4073649679301 86.58 1 -1.4333234875128433 0.40920958658720774 1.0 ['ENST00000401950.6_1_22:30421796-30421910:+|nuORF'] 63441 15770 LLVSMWGPW True PC9_epitope_Rep1 1087.55247333735 1087.55136993586 65.482 2 -1.4333893007696992 0.4092165035358029 1.0 ['ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 11152 7483 DDIFNRLVFR True NCI_RA007_Epitope_Rep2 1293.6829699129298 1293.68131490379 33.736 3 -1.433442901026259 0.4092351281420861 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 52550 21726 KLFTVNTV True NCI_RA007_Epitope_Rep3 920.53311779176 920.53202993586 94.392 2 -1.4334655704645882 0.40923725340982264 1.0 ['ENST00000380763.7_1_X:11129527-11130263:+|nuORF', 'ENST00000380762.4_1_X:11129580-11130263:+|nuORF', 'ENST00000321143.8_1_X:11129465-11130266:+|nuORF'] 9661 20525 AYELKIANKL True PC9_epitope_Rep5 1161.6757592741699 1161.67466993586 83.991 2 -1.4334691440943808 0.40923725340982264 1.0 ['nc|ENSG00000057149|P29508-2|SERPINB3', 'ENSG00000206073|ENST00000341074|SERPINB4', 'ENSG00000057149|ENST00000283752|SERPINB3', 'SERPINB3|p.W201Lfs*50|1|0.44|ENSG00000057149|chr18:63657280-63657281|-/A|frameshift_variant'] 64486 10351 LPQLLRTN True PC9_epitope_Rep2 953.5658149023701 953.56470993586 45.14 2 -1.4335453894373227 0.40927183329431044 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|42|1|sense'] 65506 22143 LRNARKLPEK True PC9_epitope_Rep6 1223.7462388758297 1223.7445949037901 98.115 3 -1.4335843801729962 0.40927183329431044 1.0 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 10676 6822 CQHIPKAERP True H1975_Epitope_Rep1 1177.6026114172498 1177.6015099358601 31.284 2 -1.4335922754935133 0.40927183329431044 1.0 ['ENSG00000160908|ENST00000337673|ZNF394'] 65930 12386 LSDSAGIGFRH True NCI_RA007_Epitope_Rep1 1158.57817049122 1158.5770699358602 52.154 2 -1.433631763363044 0.40927183329431044 1.0 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-5|IL17RE', 'ENST00000489181.5_1_3:9944520-9950978:+|nuORF'] 141536 5979 YTMAPAWTWWV True H1975_Epitope_Rep1 1410.6430792469 1410.64198993586 28.069 2 -1.4336449901072403 0.40927183329431044 1.0 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 25472 19908 FEELYRNA True PC9_epitope_Rep2 1040.4927095317598 1040.4916099358602 81.972 2 -1.4337650711746406 0.4092904555085986 1.0 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.L52V|1|0.14|ENSG00000036257|chr2:224557769-224557769|G/C|missense_variant'] 65377 13249 LREAGEKKAP True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 56.238 2 -1.4338114067212646 0.4092925792819264 1.0 ['ENSG00000169840|ENST00000302945|GSX1'] 36928 15753 GVLRQHQLR True NCI_RA007_Epitope_Rep3 1105.64685918773 1105.64576993586 69.602 2 -1.4338327192597518 0.4092925792819264 1.0 ['ENST00000319836.7_1_10:45956824-45959774:-|nuORF'] 38626 5805 HFFVEWFQYRK True NCI_RA007_Epitope_Rep2 1585.78301830737 1585.7813849037902 27.198 3 -1.4339423260172193 0.4093346132234501 1.0 ['CENPP|p.E178Q|1|0.35|ENSG00000188312|chr9:92379827-92379827|G/C|missense_variant'] 133033 23531 VVPIEVLPTV True PC9_epitope_Rep6 1064.648147544 1064.6470499358602 103.65 2 -1.434033125622867 0.40935323383084576 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 120963 5615 VEPHSPSPSSK True NCI_RA007_Epitope_Rep2 1150.56185172074 1150.56074993586 26.459 2 -1.4341097511684162 0.40936706193592187 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 23674 6314 EYDDQRALEIH True NCI_RA007_Epitope_Rep2 1387.6368075661499 1387.6357099358602 29.165 2 -1.434111323801484 0.40936706193592187 1.0 ['ENSG00000180611|ENST00000392452|MB21D2'] 18520 25293 EKIKVQTTP True PC9_epitope_Rep2 1042.60225998074 1042.60116993586 102.96 2 -1.4342239975472346 0.40940909303741163 1.0 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENST00000528388.5_1_11:47753749-47758242:-|nuORF'] 85078 9079 QEKERLEEKQR True NCI_RA007_Epitope_Rep1 1471.7743040984699 1471.7732099358602 39.315 2 -1.4342893636624012 0.4094346248390495 1.0 ['ENSG00000130703|ENST00000313733|OSBPL2', 'nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 121020 19582 VEQESQIFHDI True PC9_epitope_Rep4 1343.6357449369898 1343.6346499358601 83.444 2 -1.4343139511084166 0.4094346248390495 1.0 ['ENSG00000172318|ENST00000392690|B3GALT1'] 46347 13043 ISRCWRPE True PC9_epitope_Rep5 1045.51273378369 1045.5116299358601 55.174 2 -1.4343936437979066 0.4094484502294222 1.0 ['ENST00000563447.1_1_16:2292636-2292951:-|nuORF'] 141193 11751 YSWKKDWYSH True H1975_Epitope_Rep1 1398.6356853673399 1398.63458993586 50.194 2 -1.4344237834496334 0.4094484502294222 1.0 ['ENSG00000066422|ENST00000312938|ZBTB11'] 111370 23567 THRRVRLHRH True PC9_epitope_Rep4 1366.79190071198 1366.7908099358601 98.958 2 -1.4344757137167192 0.40946651372925397 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 63072 18809 LLQKLRAK True H1975_Epitope_Rep2 968.6494849566799 968.64838993586 78.103 2 -1.4344939277148885 0.40946651372925397 1.0 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145580513-145580615:+|nuORF'] 126744 25420 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 109.89 3 -1.4345442093994376 0.40946651372925397 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 131862 6256 VTRDEAAK True PC9_epitope_Rep4 888.4664947839199 888.46538993586 31.113 2 -1.434546061793628 0.40946651372925397 1.0 ['RBM28|p.K496Tfs*11|1|0.19|ENSG00000106344|chr7:128321326-128321342|TTTGTCATCTACAGCCT/-|frameshift_variant', 'nc|ENSG00000106344|Q9NW13-2|RBM28', 'ENSG00000106344|ENST00000223073|RBM28'] 2607 5106 AERPLTPAP True H1975_Epitope_Rep2 950.5185303567799 950.51742993586 24.72 2 -1.4345740907519173 0.40946651372925397 1.0 ['ENST00000441896.1_1_7:57059615-57063740:+|nuORF'] 31292 19409 GDIFRSKLKNR True H1975_Epitope_Rep1 1332.7626172159598 1332.7615299358602 80.837 2 -1.4346176353529532 0.40946651372925397 1.0 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 16377 18799 EEIQTVYKI True PC9_epitope_Rep5 1121.5968402471299 1121.59574993586 77.323 2 -1.4346441761137847 0.40948512974168705 1.0 ['ENSG00000176658|ENST00000318217|MYO1D'] 63927 22847 LNRKLAVGSHP True PC9_epitope_Rep6 1190.68838964654 1190.6867549037902 100.98 3 -1.4347454940768778 0.40949204119850185 1.0 ['PDZD8|p.I1116*|1|0.13|ENSG00000165650|chr10:117283387-117283387|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 28826 8119 FSWFWFRLYWF True H1975_Epitope_Rep1 1683.8026911227896 1683.8010449037902 36.175 3 -1.4347847802560665 0.4094989524935336 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 73141 20705 MRRRRRRPVT True NCI_RA007_Epitope_Rep1 1382.8265719685398 1382.8254699358602 84.763 2 -1.4348966111811388 0.4095206890095488 1.0 ['nc|ENSG00000182872|P0DW28|RBM10', 'RBM10|p.S65Rfs*69|1|0.17|ENSG00000182872|chrX:47169492-47169492|T/-|frameshift_variant', 'RBM10|p.R15Afs*119|1|0.35|ENSG00000182872|chrX:47169339-47169339|C/-|frameshift_variant', 'RBM10|p.D40Tfs*94|1|0.29|ENSG00000182872|chrX:47169414-47169414|G/-|frameshift_variant'] 35546 18258 GSVDIGERCL True PC9_epitope_Rep6 1047.50189431647 1047.5007899358602 82.871 2 -1.4350195362316676 0.4095206890095488 1.0 ['STK31|p.E202Rfs*58|1|0.16|ENSG00000196335|chr7:23735656-23735656|A/-|frameshift_variant'] 84357 15481 PYYRENQQRWQ True PC9_epitope_Rep5 1566.7327736396599 1566.73166993586 64.559 2 -1.4350565979743943 0.4095206890095488 1.0 ['ENSG00000170608|ENST00000302177|FOXA3'] 131274 7739 VTFSRRFG True NCI_RA007_Epitope_Rep4 968.5191990631198 968.51865496793 36.444 1 -1.4351298509426258 0.4095206890095488 1.0 ['ENST00000300688.7_1_11:118272331-118272397:+|nuORF'] 66961 10769 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 49.182 2 -1.4351595668312382 0.4095206890095488 1.0 ['ENSG00000198734|ENST00000367797|F5'] 87178 10856 QPGPVGVGTF True H1975_Epitope_Rep1 957.4919812557699 957.49088993586 46.717 2 -1.4351842793131822 0.4095206890095488 1.0 ['ENST00000372530.8_2_6:43395757-43400350:+|nuORF'] 58223 7216 LELGDSEIW True PC9_epitope_Rep3 1060.50769088956 1060.5065899358601 32.768 2 -1.4352140566466132 0.4095206890095488 1.0 ['ENST00000293880.9_1_11:57100904-57100949:-|nuORF'] 81193 22481 PKGPGLSL True PC9_epitope_Rep5 767.4541391950701 767.45304993586 91.475 2 -1.4352352766084735 0.4095206890095488 1.0 ['ENSG00000261873|ENST00000636752|SMIM36'] 37336 16645 GVSFPKDNSC True PC9_epitope_Rep5 1052.4596951513201 1052.4585899358601 69.03 2 -1.4352354059178778 0.4095206890095488 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 59500 20185 LFRIIKPRKVF True H1975_Epitope_Rep2 1415.91291027811 1415.91127490379 83.636 3 -1.4353488972101738 0.4095206890095488 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'XRN1|p.W602Cfs*21|1|0.68|ENSG00000114127|chr3:142404984-142404984|C/-|frameshift_variant'] 93224 5215 RPREALSTNEC True PC9_epitope_Rep5 1274.6037336160598 1274.60209490379 25.077 3 -1.4353592846175272 0.4095206890095488 1.0 ['ENSG00000018510|ENST00000264167|AGPS'] 68463 21895 LTFFCTNAT True NCI_RA007_Epitope_Rep5 1016.4637179026 1016.46262993586 91.346 2 -1.4353964306364024 0.4095206890095488 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D', 'SCNN1D|p.C421Pfs*60|1|0.11|ENSG00000162572|chr1:1290360-1290370|CTGCAGCTCTG/-|frameshift_variant'] 135817 23741 WNKRKKRQVP True PC9_epitope_Rep2 1338.79967143102 1338.7980149037899 96.791 3 -1.4354762252348783 0.4095206890095488 1.0 ['nc|ENSG00000122188|Q8IWV1-3|LAX1', 'ENSG00000122188|ENST00000442561|LAX1', 'LAX1|p.N166Tfs*41|1|0.12|ENSG00000122188|chr1:203773977-203773977|G/-|frameshift_variant'] 81661 17269 PLLPALSA True NCI_RA007_Epitope_Rep5 780.4745402864801 780.47344993586 73.198 2 -1.4355380113962621 0.4095206890095488 1.0 ['ENST00000550147.5_1_12:53899948-53900041:+|nuORF'] 29597 9526 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 43.493 3 -1.4355467810570304 0.4095206890095488 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 126353 22237 VLISLRTFL True PC9_epitope_Rep5 1060.66446631448 1060.6633699358601 90.542 2 -1.4358937018838702 0.4095552357215572 1.0 ['nc|ENSG00000167077|Q5TIA1-5|MEI1', 'nc|ENSG00000167077|Q5TIA1-3|MEI1', 'nc|ENSG00000167077|Q5TIA1-2|MEI1', 'ENSG00000167077|ENST00000401548|MEI1', 'ENST00000473736.5_1_22:42172081-42174878:+|nuORF', 'SREBF2-MEI1|1|fusion'] 124689 10229 VGYQVPEAE True NCI_RA007_Epitope_Rep3 990.4658260775798 990.4652749679301 47.314 1 -1.435911148900315 0.4095552357215572 1.0 ['ENST00000588723.5_1_19:37606065-37660830:-|nuORF', 'ZNF585A|p.K361Rfs*9|1|0.24|ENSG00000196967|chr19:37152819-37152819|C/-|frameshift_variant', 'nc|ENSG00000196967|Q6P3V2-2|ZNF585A', 'ENSG00000196967|ENST00000292841|ZNF585A'] 45528 12016 IQQIYEWHRDY True H1975_Epitope_Rep1 1549.73137665733 1549.7302699358602 51.227 2 -1.4359144939981574 0.4095552357215572 1.0 ['nc|ENSG00000240771|Q86VW2-2|ARHGEF25', 'ENSG00000240771|ENST00000286494|ARHGEF25', 'nc|ENSG00000240771|Q86VW2-3|ARHGEF25'] 12117 17393 DICRWPLMP True H1975_Epitope_Rep3 1129.5412570306498 1129.54067496793 72.574 1 -1.4359541085354601 0.4095552357215572 1.0 ['ENST00000372870.5_1_9:131122965-131123439:+|nuORF'] 133181 7515 VVRNVKGG True NCI_RA007_Epitope_Rep2 827.4977353425498 827.49662993586 33.857 2 -1.4359718098070662 0.4095552357215572 1.0 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF'] 31211 21836 GCGKRFTE True H1975_Epitope_Rep2 896.4174364165199 896.41632993586 90.3 2 -1.4360349192881878 0.4095807542445269 1.0 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 12831 10793 DLGKKLSVPQ True H1975_Epitope_Rep3 1083.6288090817498 1083.6277099358601 46.596 2 -1.4360474342687801 0.4095807542445269 1.0 ['nc|ENSG00000164591|Q8TDC0-3|MYOZ3', 'nc|ENSG00000164591|Q8TDC0-2|MYOZ3', 'ENSG00000164591|ENST00000517768|MYOZ3'] 18155 9042 EIKEEQAQTGQ True NCI_RA007_Epitope_Rep2 1259.5993594282697 1259.5982699358601 39.773 2 -1.436108093320278 0.40958287018077577 1.0 ['ENSG00000172789|ENST00000312492|HOXC5'] 78021 13494 NVRFSTIVRRR True H1975_Epitope_Rep1 1402.8269488080198 1402.82584993586 57.025 2 -1.4361273933209437 0.40958287018077577 1.0 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 9426 11693 AVTVDGHPVA True PC9_epitope_Rep5 964.4977949121999 964.49668993586 49.973 2 -1.4361576200217623 0.4095897783914071 1.0 ['nc|ENSG00000135253|Q6ZWJ8|KCP', 'ENSG00000135253|ENST00000610776|KCP', 'ENST00000460528.1_1_7:128519440-128519819:-|nuORF', 'nc|ENSG00000135253|Q6ZWJ8-2|KCP', 'ENST00000492679.5_1_7:128505031-128520709:-|nuORF'] 30965 25129 GARTPKCI True PC9_epitope_Rep2 844.45890730568 844.45780993586 102.33 2 -1.4362548332506466 0.40961205484580465 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'HERC5|p.G315Efs*23|1|0.28|ENSG00000138646|chr4:88467089-88467089|G/-|frameshift_variant'] 68490 6887 LTFRDNADL True NCI_RA007_Epitope_Rep2 1063.52982331647 1063.5287299358602 31.406 2 -1.4362922594552976 0.40961205484580465 1.0 ['nc|ENSG00000147724|Q49AJ0-2|FAM135B', 'ENST00000482951.6_1_8:139144838-139379577:-|nuORF', 'ENSG00000147724|ENST00000395297|FAM135B'] 72351 13859 MIRGCGGG True PC9_epitope_Rep5 749.3312642644099 749.33016993586 58.329 2 -1.436336327392803 0.40961205484580465 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 41162 22355 HVFHRRRPP True PC9_epitope_Rep4 1200.6740769950798 1200.67296993586 94.224 2 -1.4363727357006315 0.40961205484580465 1.0 ['ENSG00000134569|ENST00000378623|LRP4'] 126721 25118 VLPGKKKKKT True H1975_Epitope_Rep1 1125.75976368165 1125.75811490379 104.0 3 -1.4364416260022892 0.40961205484580465 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 11153 14698 DDIGLVSL True PC9_epitope_Rep4 830.43854870058 830.43744993586 64.471 2 -1.4364912770921763 0.40961205484580465 1.0 ['ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2', 'SOS2|p.Q742Tfs*14|1|0.03|ENSG00000100485|chr14:50150168-50150169|-/CACATCTCAAATTTGTTTCCCCTAGT|frameshift_variant', 'SOS2|p.M420Ifs*3|1|0.4|ENSG00000100485|chr14:50160023-50160024|-/A|frameshift_variant'] 25891 17454 FFLIKWHILH True NCI_RA007_Epitope_Rep4 1352.7757480989599 1352.77464993586 75.572 2 -1.436616228797257 0.40961205484580465 1.0 ['ENST00000340979.10_1_1:159024760-159024901:+|nuORF'] 46414 11854 ISSPFLNYRMT True PC9_epitope_Rep3 1327.65945758703 1327.65836993586 50.615 2 -1.4366220660969669 0.40961205484580465 1.0 ['ENSG00000118492|ENST00000397944|ADGB'] 124058 24944 VGSKNPTK True PC9_epitope_Rep5 829.46576650793 829.46521496793 101.12 1 -1.436711484269174 0.40961205484580465 1.0 ['nc|ENSG00000112769|Q16363-2|LAMA4', 'nc|ENSG00000112769|Q16363|LAMA4', 'ENSG00000112769|ENST00000230538|LAMA4'] 60274 21179 LGRQWPDQV True PC9_epitope_Rep5 1097.56179215109 1097.5606899358602 86.516 2 -1.4367149674953505 0.40961205484580465 1.0 ['ENST00000507318.1_1_5:148443832-148443991:+|nuORF'] 72244 22971 MHHDRFKVF True H1975_Epitope_Rep3 1215.5971321139898 1215.59548490379 95.963 3 -1.4367546488730156 0.4096210765217188 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM'] 68398 9325 LTESPSPDP True H1975_Epitope_Rep1 941.43419159613 941.43364496793 40.776 1 -1.4367828108589147 0.4096210765217188 1.0 ['ENST00000270645.7_1_19:50046533-50046872:+|nuORF'] 52531 14291 KLEFHFWIYHF True H1975_Epitope_Rep3 1565.78195567821 1565.78084993586 60.314 2 -1.4368334325403638 0.4096210765217188 1.0 ['ENST00000421210.1_2_10:64135465-64135950:+|nuORF'] 79636 15895 PDNFIFGRF True PC9_epitope_Rep5 1111.5450794577898 1111.54398993586 66.13 2 -1.4369302694141612 0.40964179593364686 1.0 ['ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 87174 5955 QPGDPGVP True PC9_epitope_Rep6 765.36571811349 765.36462993586 31.208 2 -1.43693617082013 0.40964179593364686 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 70032 19900 LVMRSPHSDV True PC9_epitope_Rep5 1139.57572796307 1139.57462993586 81.6 2 -1.4369405755901317 0.40964179593364686 1.0 ['ENSG00000169071|ENST00000375708|ROR2', 'ROR2|p.S608Afs*15|1|0.23|ENSG00000169071|chr9:91724673-91724673|G/-|frameshift_variant'] 68749 12249 LTLDTWEP True H1975_Epitope_Rep3 973.47566248529 973.47511496793 52.293 1 -1.4369863187684444 0.40964870208111553 1.0 ['ENSG00000114331|ENST00000326793|ACAP2', 'ACAP2|p.S453C|1|0.43|ENSG00000114331|chr3:195301612-195301612|G/C|missense_variant', 'ENST00000475905.5_1_3:195016371-195022834:-|nuORF'] 85024 22872 QEHKHHMV True NCI_RA007_Epitope_Rep5 1044.4923326922801 1044.49122993586 95.196 2 -1.437124405753981 0.40966730616255675 1.0 ['ENSG00000179046|ENST00000682553|TRIML2', 'nc|ENSG00000179046|Q8N7C3-2|TRIML2', 'ENST00000511771.1_1_4:189020146-189026726:-|nuORF'] 12055 3986 DHSYDPDFNQL True NCI_RA007_Epitope_Rep2 1349.5524092358498 1349.55076490379 20.141 3 -1.437257858154526 0.40970451301967575 1.0 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 120761 15333 VEKRRNPSKHY True NCI_RA007_Epitope_Rep2 1412.7636798451201 1412.7625899358602 64.339 2 -1.4373003291360429 0.40970451301967575 1.0 ['nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A', 'ENSG00000107957|ENST00000369774|SH3PXD2A'] 127028 9338 VLSGVTTLLPG True NCI_RA007_Epitope_Rep2 1055.62266107215 1055.6215699358602 40.93 2 -1.4373312464602217 0.4097231157953841 1.0 ['ACTRT1|p.G303V|1|0.05|ENSG00000123165|chrX:128051299-128051299|C/A|missense_variant'] 55782 10443 LANEKEEL True PC9_epitope_Rep5 944.4814761417199 944.48036993586 45.156 2 -1.4373371138630813 0.4097252278070863 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 63937 10909 LNSFRISDHHH True NCI_RA007_Epitope_Rep2 1361.6588804234102 1361.6577899358601 47.042 2 -1.4374659030786885 0.4097252278070863 1.0 ['ENST00000449870.5_2_19:10801619-10802189:+|nuORF'] 126566 15264 VLLRRSSS True NCI_RA007_Epitope_Rep5 916.5454138109601 916.54430993586 65.404 2 -1.4374900747457073 0.4097321324131477 1.0 ['ENST00000243077.7_1_12:57539180-57539225:+|nuORF'] 15518 14434 EANMDIVYKDM True H1975_Epitope_Rep2 1327.5788243078298 1327.5777299358601 60.674 2 -1.437522299458662 0.40974748242669506 1.0 ['ENSG00000050393|ENST00000379170|MCUR1'] 35501 8022 GSPALQNLYRL True PC9_epitope_Rep2 1230.67207087606 1230.67042490379 36.217 3 -1.4375670641716214 0.40974748242669506 1.0 ['ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 128328 9159 VPPSQPPP True PC9_epitope_Rep1 817.4334037504899 817.43230993586 40.081 2 -1.4375898218521725 0.40974748242669506 1.0 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 91679 5848 RIWWNWLCLSW True NCI_RA007_Epitope_Rep2 1561.76526006825 1561.76362490379 27.365 3 -1.4377610374373146 0.40974748242669506 1.0 ['ENST00000558850.5_1_14:102798088-102800954:+|nuORF'] 123599 4871 VGQDPVLR True NCI_RA007_Epitope_Rep5 882.49231560894 882.49120993586 25.431 2 -1.4377804717224065 0.40974748242669506 1.0 ['ENSG00000106028|ENST00000265304|SSBP1', 'ENST00000489378.5_1_7:141438966-141445458:+|nuORF'] 116473 15208 TTLTSRRTTRI True H1975_Epitope_Rep3 1304.75244645508 1304.7513499358602 63.9 2 -1.4377967405269736 0.40974748242669506 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 87644 23995 QQREYKKKK True PC9_epitope_Rep3 1234.7146043943796 1234.71295490379 97.584 3 -1.4378036136199446 0.40974748242669506 1.0 ['ENSG00000119953|ENST00000369603|SMNDC1'] 119093 16500 VAGQGRNAL True PC9_epitope_Rep5 884.4828135543999 884.48170993586 68.465 2 -1.4378151244430812 0.40974748242669506 1.0 ['ENSG00000081479|ENST00000649046|LRP2', 'LRP2|p.R2752Dfs*52|1|0.2|ENSG00000081479|chr2:169201827-169201827|C/-|frameshift_variant'] 120221 18407 VEARRWLRQAR True H1975_Epitope_Rep1 1439.82219778075 1439.82110993586 76.714 2 -1.437875935933506 0.40974748242669506 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 72245 23471 MHHDRFKVF True H1975_Epitope_Rep3 1215.5971321139898 1215.59548490379 97.951 3 -1.4379689361591386 0.40975438596491226 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM'] 114151 19394 TPKFHSYL True PC9_epitope_Rep2 991.51271670035 991.51160993586 79.976 2 -1.4380155899600073 0.40976128934164513 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39', 'ENST00000528810.1_1_8:145769259-145771014:-|nuORF'] 79746 14925 PEAARPAIHS True NCI_RA007_Epitope_Rep4 1047.5461420869499 1047.54504993586 64.874 2 -1.4380613939972193 0.4097772060113444 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 112878 13196 TLKKIKWV True PC9_epitope_Rep2 1014.6589870112199 1014.65788993586 56.036 2 -1.4381499400611537 0.4097772060113444 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.S4093Kfs*16|1|0.14|ENSG00000151835|chr13:23331598-23331599|-/CCGGGAGAATATGTTGGGTACCT|frameshift_variant', 'SACS|p.G2610Afs*15|1|0.31|ENSG00000151835|chr13:23336049-23336049|T/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 16231 4816 EEERESEFALR True H1975_Epitope_Rep3 1393.6473722498497 1393.6462699358601 23.651 2 -1.4381592999365251 0.4097772060113444 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 27142 7405 FLKKKKKERKK True NCI_RA007_Epitope_Rep2 1459.9714877833896 1459.97038993586 33.43 2 -1.438176530213823 0.4097772060113444 1.0 ['ENST00000078429.8_1_19:3121435-3121495:+|nuORF'] 37471 15774 GVTTSKPGV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 65.667 2 -1.4383884249921646 0.40979791364550683 1.0 ['ENSG00000149564|ENST00000278927|ESAM', 'ENST00000485116.5_1_11:124623544-124626668:-|nuORF', 'ENST00000464067.1_1_11:124626431-124626668:-|nuORF'] 68547 5270 LTGPAICH True PC9_epitope_Rep2 810.40580910366 810.40470993586 25.658 2 -1.4384760481832046 0.40979791364550683 1.0 ['ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 30836 5114 GAPFLKEGASE True NCI_RA007_Epitope_Rep5 1104.54513902744 1104.5440499358601 26.369 2 -1.4384993726128354 0.40979791364550683 1.0 ['nc|ENSG00000198848|P23141-3|CES1', 'nc|ENSG00000198848|P23141|CES1', 'ENSG00000198848|ENST00000360526|CES1', 'ENST00000421606.6_2_16:55801397-55827869:+|nuORF'] 42458 5635 IEECGLELYFS True NCI_RA007_Epitope_Rep2 1301.5849552340899 1301.5838499358601 26.532 2 -1.4385281759562492 0.40981651054274987 1.0 ['ENST00000466609.1_1_3:98378565-98379411:+|nuORF'] 20264 19491 ENPIFLPSDAK True PC9_epitope_Rep4 1229.62920300457 1229.62810993586 83.088 2 -1.4386309183854114 0.4098537030323584 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 79416 7426 PATNLTRAL True PC9_epitope_Rep4 955.5450794577899 955.5439899358599 35.914 2 -1.438725546732966 0.4098537030323584 1.0 ['nc|ENSG00000185621|Q96KR4-2|LMLN', 'nc|ENSG00000185621|Q96KR4|LMLN', 'ENSG00000185621|ENST00000420910|LMLN'] 123168 17333 VGKWPFPQH True PC9_epitope_Rep6 1094.5661492555398 1094.56504993586 79.284 2 -1.4388113334650816 0.40989779451317915 1.0 ['ENST00000319080.7_12:122630330-122630822:+|nuORF'] 88759 19528 QTPFGVVTFLQ True PC9_epitope_Rep6 1235.65502382959 1235.65392993586 87.777 2 -1.4388605160634762 0.40989779451317915 1.0 ['WBP1L-SUFU|4|fusion', 'WBP1L-SUFU|2|fusion', 'WBP1L-SUFU|3|fusion', 'WBP1L-SUFU|1|fusion', 'nc|ENSG00000107882|Q9UMX1-2|SUFU', 'nc|ENSG00000107882|Q9UMX1-3|SUFU', 'ENSG00000107882|ENST00000369902|SUFU'] 16702 12301 EERSGWEL True PC9_epitope_Rep3 1004.4563240230399 1004.45522993586 52.341 2 -1.438868771180149 0.40989779451317915 1.0 ['ENST00000563969.5_1_16:67312069-67312180:+|nuORF'] 44811 3993 IMYYLTPQWDK True NCI_RA007_Epitope_Rep2 1456.7060734262798 1456.7044349037901 20.168 3 -1.4389179306616746 0.40991370237844665 1.0 ['ENSG00000196517|ENST00000372310|SLC6A9', 'nc|ENSG00000196517|P48067-3|SLC6A9', 'nc|ENSG00000196517|P48067|SLC6A9'] 66009 11353 LSEDADSPWLL True NCI_RA007_Epitope_Rep1 1244.59248314268 1244.5913899358602 48.133 2 -1.439020121337412 0.40991370237844665 1.0 ['nc|ENSG00000008735|Q13387-2|MAPK8IP2', 'ENSG00000008735|ENST00000329492|MAPK8IP2'] 66955 13736 LSPDLSHTTL True PC9_epitope_Rep2 1082.56078909158 1082.5596899358602 58.123 2 -1.439022239278766 0.40991370237844665 1.0 ['ENSG00000198734|ENST00000367797|F5'] 18428 15475 EIWRCYWQYLL True NCI_RA007_Epitope_Rep1 1571.7595059814698 1571.75840993586 64.277 2 -1.439033881338695 0.40991370237844665 1.0 ['nc|ENSG00000166881|O14524-2|NEMP1', 'ENSG00000166881|ENST00000300128|NEMP1'] 120687 23000 VEISVPVP True PC9_epitope_Rep1 838.4800195897399 838.4794749679301 93.265 1 -1.4390941709270357 0.409920602439224 1.0 ['ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 43061 18601 IEVFWAFPL True PC9_epitope_Rep5 1120.59571804832 1120.5946299358602 76.573 2 -1.4391578120092596 0.40992960875564183 1.0 ['CNTN4|p.S824F|1|0.22|ENSG00000144619|chr3:3042382-3042382|C/T|missense_variant'] 48719 5674 KDAQPSFSAED True H1975_Epitope_Rep3 1193.52004647841 1193.51894993586 26.854 2 -1.4391684654662966 0.40992960875564183 1.0 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 49980 24567 KISTLLKLT True PC9_epitope_Rep4 1015.66413196131 1015.66302993586 102.99 2 -1.4391801090178522 0.40992960875564183 1.0 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 32093 9064 GESVQKPLDYY True PC9_epitope_Rep2 1297.6190322436898 1297.61792993586 40.21 2 -1.4393106265786528 0.4099832793517533 1.0 ['nc|ENSG00000117308|Q14376-2|GALE', 'ENSG00000117308|ENST00000617979|GALE', 'ENST00000459934.5_1_1:24122658-24127224:-|nuORF'] 131478 18293 VTKERMII True PC9_epitope_Rep6 988.5739370579199 988.57282993586 83.006 2 -1.439346126002837 0.4099970768781058 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 19197 7276 ELIEEFGQP True PC9_epitope_Rep5 1060.5076908895599 1060.5065899358601 32.95 2 -1.4394503850888751 0.4099970768781058 1.0 ['ENST00000481600.5_1_10:127417653-127452038:+|nuORF', 'nc|ENSG00000107938|Q3B7T1-5|EDRF1', 'ENSG00000107938|ENST00000356792|EDRF1', 'EDRF1|p.Q1122R|1|0.3|ENSG00000107938|chr10:125752886-125752886|A/G|missense_variant', 'ENST00000419769.6_1_10:127430814-127452038:+|nuORF'] 98003 6820 SEQCAYITSW True H1975_Epitope_Rep2 1186.49647458286 1186.49482490379 31.152 3 -1.4394961638758992 0.41001566775015785 1.0 ['ENST00000371711.4_1_20:48251667-48252051:-|nuORF'] 11280 10400 DEGVQLPSKK True H1975_Epitope_Rep1 1099.5873381925899 1099.58624993586 44.953 2 -1.4396640725191165 0.4101230006547563 1.0 ['SPATA31A3|p.L1151del|1|0.22|ENSG00000275969|chr9:66987049-66987051|AGC/-|inframe_deletion'] 136937 24811 YAGLLGTI True NCI_RA007_Epitope_Rep1 806.4538048419 806.4532549679301 102.71 1 -1.4396889291757742 0.4101230006547563 1.0 ['ENST00000474436.1_1_9:35090976-35092764:-|nuORF', 'ENST00000465745.6_1_9:35090240-35092764:-|nuORF', 'ENSG00000165282|ENST00000378617|PIGO'] 92311 6194 RLLPVVPLPPP True H1975_Epitope_Rep2 1196.76451470892 1196.7634099358602 28.797 2 -1.4397492828531258 0.4101415894024249 1.0 ['MYO18A|p.P208L|1|0.15|ENSG00000196535|chr17:29166318-29166318|G/A|missense_variant'] 36964 23290 GVMGRILELKN True PC9_epitope_Rep5 1228.6961774489198 1228.69567496793 94.569 1 -1.439812899874052 0.4101787655937613 1.0 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 112302 23393 TKTQVGLIQ True H1975_Epitope_Rep2 986.5760452328998 986.57494993586 96.445 2 -1.439826063227252 0.4101787655937613 1.0 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G492Vfs*20|1|0.36|ENSG00000164171|chr5:53062801-53062801|G/-|frameshift_variant'] 72367 23376 MIVKIKRIRR True PC9_epitope_Rep1 1311.8649145398697 1311.8638099358602 94.695 2 -1.4398377447972726 0.41018086586463703 1.0 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000495254.5_1_1:79119932-79128426:+|nuORF', 'ENST00000485662.1_1_1:79125005-79128426:+|nuORF', 'nc|ENSG00000137965|Q8TCB0-2|IFI44'] 45432 12395 IQHRERRERSR True NCI_RA007_Epitope_Rep2 1521.8348877227697 1521.83378993586 52.821 2 -1.4398775454236268 0.41018086586463703 1.0 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 122210 10335 VGAPGDIWA True PC9_epitope_Rep5 884.43921740692 884.43812993586 44.737 2 -1.4399767251418614 0.4101877615918816 1.0 ['ENST00000403325.5_1_22:19808897-19842309:-|nuORF', 'ENST00000405640.1_1_22:19839984-19842309:-|nuORF'] 59089 23101 LEWSLFDDLAT True NCI_RA007_Epitope_Rep5 1308.6237832709598 1308.6221249037899 96.107 3 -1.4400095147519083 0.4102063482784825 1.0 ['ENSG00000204977|ENST00000378182|TRIM13', 'nc|ENSG00000204977|O60858-3|TRIM13'] 35271 20691 GREQLLERVRR True NCI_RA007_Epitope_Rep3 1410.81677804714 1410.81514490379 90.118 3 -1.4400802711563654 0.4102147458003577 1.0 ['ENST00000521314.5_1_16:67198707-67203685:+|nuORF', 'nc|ENSG00000102878|Q9ULV5-2|HSF4', 'ENSG00000102878|ENST00000521374|HSF4', 'ENST00000522870.5_1_16:67199659-67200172:+|nuORF'] 46413 2817 ISSPAPTLEE True NCI_RA007_Epitope_Rep1 1042.5182555732601 1042.51714993586 14.796 2 -1.440086027129999 0.4102147458003577 1.0 ['nc|ENSG00000147509|O76081-4|RGS20'] 126083 14973 VLELDLSDMPL True PC9_epitope_Rep2 1243.63699080695 1243.6358899358602 62.851 2 -1.4401420657828319 0.4102147458003577 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 124286 6617 VGTNCQEQ True H1975_Epitope_Rep2 877.3599811100498 877.35888993586 30.36 2 -1.4401932042410137 0.4102147458003577 1.0 ['ENSG00000164512|ENST00000341048|ANKRD55', 'nc|ENSG00000164512|Q3KP44-3|ANKRD55', 'nc|ENSG00000164512|Q3KP44-2|ANKRD55', 'PPAP2A-ANKRD55|2|fusion', 'PPAP2A-ANKRD55|1|fusion'] 2123 7881 AELLYSLQ True NCI_RA007_Epitope_Rep1 935.49639792987 935.49530993586 34.648 2 -1.4402593920180629 0.4102147458003577 1.0 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.I1026L|1|0.19|ENSG00000198862|chr21:28956765-28956765|T/A|missense_variant'] 132608 24458 VVFILQKA True PC9_epitope_Rep4 916.57458868092 916.57348993586 102.56 2 -1.4402832713661415 0.4102147458003577 1.0 ['ENST00000507310.1_2_5:102482311-102483895:+|nuORF', 'ENST00000321521.13_1_5:102482350-102484949:+|nuORF'] 19081 7196 ELGEKKPR True H1975_Epitope_Rep3 955.5450794577899 955.5439899358599 32.654 2 -1.4403147062361166 0.4102147458003577 1.0 ['ENST00000588926.5_1_19:44617677-44619969:+|nuORF'] 8783 16211 AVDMMELYNRL True PC9_epitope_Rep3 1353.6420932707297 1353.64098993586 67.492 2 -1.440393661090258 0.4102147458003577 1.0 ['nc|ENSG00000205629|Q9UIC8-2|LCMT1', 'ENST00000572869.1_1_16:25162908-25186269:+|nuORF', 'nc|ENSG00000205629|Q9UIC8-3|LCMT1', 'ENSG00000205629|ENST00000399069|LCMT1'] 70698 23608 LWMLLKLRQR True PC9_epitope_Rep2 1355.8223810215497 1355.82073490379 96.277 3 -1.440410709905015 0.4102168449354141 1.0 ['nc|ENSG00000104883|Q96HA9-2|PEX11G', 'ENST00000599519.1_1_19:7542090-7548186:-|nuORF', 'ENSG00000104883|ENST00000221480|PEX11G'] 86801 10524 QLNRRFQFL True NCI_RA007_Epitope_Rep2 1220.6778249628398 1220.67672993586 45.533 2 -1.4404226032961243 0.4102168449354141 1.0 ['ENSG00000108592|ENST00000427159|FTSJ3', 'FTSJ3|p.A327Efs*42|1|0.3|ENSG00000108592|chr17:63824349-63824349|G/-|frameshift_variant', 'ENST00000582476.1_1_17:61903877-61904262:-|nuORF', 'ENST00000577263.5_1_17:61903352-61904262:-|nuORF'] 58475 10483 LEPYKYLLQLP True H1975_Epitope_Rep1 1375.77513896227 1375.7740499358601 45.278 2 -1.4405760181472544 0.41028218736118577 1.0 ['ENSG00000152904|ENST00000282841|GGPS1'] 98818 20508 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 84.97 2 -1.4406514036805627 0.41028308282101034 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 60192 7609 LGPIVHDRKSQ True PC9_epitope_Rep4 1248.6938689498 1248.69223490379 36.649 3 -1.4406836488855594 0.41028308282101034 1.0 ['ENSG00000088387|ENST00000682017|DOCK9'] 37864 8782 GYPGRQGL True PC9_epitope_Rep5 846.4348007328199 846.43370993586 38.722 2 -1.4407336317012096 0.41028308282101034 1.0 ['ENSG00000171502|ENST00000370571|COL24A1', 'nc|ENSG00000171502|Q17RW2-2|COL24A1', 'COL24A1|p.E886Kfs*50|1|0.17|ENSG00000171502|chr1:85909964-85909964|C/-|frameshift_variant', 'ENSG00000196739|ENST00000356083|COL27A1'] 124580 12460 VGVSSGKLL True PC9_epitope_Rep2 858.51746772762 858.51636993586 53.236 2 -1.440742715648729 0.41028308282101034 1.0 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-5|AIFM1', 'nc|ENSG00000156709|O95831-2|AIFM1'] 91258 8622 RGGQGHGE True NCI_RA007_Epitope_Rep5 796.3576130412799 796.35650993586 39.84 2 -1.4407479052020502 0.41028308282101034 1.0 ['ENSG00000115297|ENST00000233638|TLX2'] 69629 11142 LVDPTLAPLT True NCI_RA007_Epitope_Rep1 1038.5961119711399 1038.5950099358602 47.339 2 -1.440790995351242 0.41028308282101034 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-7|RIMS2'] 42089 20053 IDLEICELALP True PC9_epitope_Rep5 1227.6420761873899 1227.64096993586 82.187 2 -1.440841525315532 0.41028308282101034 1.0 ['PCDHGB1|p.S142L|1|0.44|ENSG00000254221|chr5:141350685-141350685|C/T|missense_variant'] 114971 24533 TQYAIFVK True NCI_RA007_Epitope_Rep1 968.5331177917599 968.53202993586 101.63 2 -1.4408732965713058 0.41028308282101034 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 56460 9084 LDELSLFGP True H1975_Epitope_Rep1 989.5069626135698 989.50586993586 39.845 2 -1.440944414316473 0.41028308282101034 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 53585 24643 KRRKRKTI True H1975_Epitope_Rep2 1084.73052924204 1084.72942993586 101.35 2 -1.4409867354289814 0.41028308282101034 1.0 ['nc|ENSG00000151292|Q9Y6M4-6|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-5|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-3|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-4|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-2|CSNK1G3', 'ENSG00000151292|ENST00000696905|CSNK1G3'] 42460 5357 IEEDILSEPEP True NCI_RA007_Epitope_Rep2 1269.5976280927698 1269.5965299358602 25.457 2 -1.4409977214408132 0.41028308282101034 1.0 ['ENSG00000047578|ENST00000261588|KATNIP'] 49230 12237 KEPGVPTT True PC9_epitope_Rep5 827.43888305375 827.43833496793 52.055 1 -1.4410485720638533 0.41028308282101034 1.0 ['nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENSG00000116690|ENST00000445192|PRG4', 'nc|ENSG00000116690|Q92954-4|PRG4', 'nc|ENSG00000116690|Q92954-3|PRG4', 'nc|ENSG00000116690|Q92954-6|PRG4'] 81731 11827 PLPAPRHPP True H1975_Epitope_Rep1 980.55558457184 980.55448993586 50.487 2 -1.4412256628322093 0.4103085553997195 1.0 ['ENST00000562955.2_2_1:43919018-43919642:+|nuORF'] 36740 6679 GVKGAKIK True PC9_epitope_Rep4 799.5279728416699 799.52686993586 32.871 2 -1.4412541381023358 0.4103085553997195 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 132646 23048 VVFVPEPC True NCI_RA007_Epitope_Rep2 888.4415259060398 888.44042993586 96.196 2 -1.4413414464812617 0.4103154474585384 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 48309 23454 IYQVRLKMI True PC9_epitope_Rep2 1162.6896355164997 1162.68852993586 95.686 2 -1.4414691917999354 0.410343014082861 1.0 ['ENST00000526129.5_1_1:76198579-76227103:+|nuORF'] 47464 6790 IVNVVCPLPEE True NCI_RA007_Epitope_Rep1 1210.62676047642 1210.62566993586 30.419 2 -1.4416613607395306 0.410343014082861 1.0 ['ENSG00000278195|ENST00000610913|SSTR3'] 84828 6960 QEAHWVLCEVL True H1975_Epitope_Rep3 1325.6438075228898 1325.64270993586 31.733 2 -1.4416641473263057 0.410343014082861 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 108002 10599 SWQQVKQVCD True H1975_Epitope_Rep1 1219.56555720219 1219.56444993586 45.724 2 -1.4416656921012732 0.410343014082861 1.0 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'ENSG00000059145|ENST00000389221|UNKL', 'nc|ENSG00000059145|Q9H9P5-2|UNKL', 'nc|ENSG00000059145|Q9H9P5-3|UNKL', 'nc|ENSG00000059145|Q9H9P5-1|UNKL'] 119151 13741 VAIKFARL True H1975_Epitope_Rep2 916.5858220709598 916.58472993586 58.001 2 -1.4419785259524147 0.4104125277550543 1.0 ['ENSG00000176148|ENST00000334274|TCP11L1'] 5396 10732 ALSRSALLPP True H1975_Epitope_Rep1 1023.6076797143498 1023.6065899358599 46.243 2 -1.4419994587350942 0.4104125277550543 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4', 'nc|ENSG00000130529|Q8TD43-3|TRPM4'] 26788 17303 FKRWNHRYDEW True NCI_RA007_Epitope_Rep2 1635.7694935015497 1635.7683899358601 72.042 2 -1.4420294713480901 0.4104125277550543 1.0 ['ENSG00000025293|ENST00000374012|PHF20', 'ENST00000481202.5_1_20:34389438-34450945:+|nuORF', 'nc|ENSG00000025293|Q9BVI0-2|PHF20'] 15739 10455 ECFFVEPD True PC9_epitope_Rep1 984.3898842559997 984.38878993586 45.102 2 -1.442063492910316 0.4104125277550543 1.0 ['ENSG00000055732|ENST00000370589|MCOLN3', 'nc|ENSG00000055732|Q8TDD5-2|MCOLN3'] 34375 20694 GPGAGGHY True H1975_Epitope_Rep1 714.30853759054 714.3079849679301 86.019 1 -1.442067315928096 0.4104125277550543 1.0 ['ENST00000409262.7_1_2:74326608-74327766:+|nuORF'] 93676 8548 RQRWFQLESSK True H1975_Epitope_Rep1 1463.7633454919498 1463.7622499358602 37.806 2 -1.4421523694861698 0.410414621605198 1.0 ['ENST00000442074.1_1_7:78115917-78116193:+|nuORF'] 10917 14150 DACLVPNTP True PC9_epitope_Rep2 928.43241777432 928.4318649679301 59.698 1 -1.4421531573636424 0.410414621605198 1.0 ['ENSG00000172689|ENST00000308287|MS4A10'] 33091 11840 GIPGMNGQ True PC9_epitope_Rep1 772.3537735308 772.35266993586 50.407 2 -1.4422314395771068 0.41043319738702627 1.0 ['nc|ENSG00000188517|Q9BXS0-3|COL25A1', 'nc|ENSG00000188517|Q9BXS0-2|COL25A1', 'chr4:108824227-108827135|137|19.13|0.87|4.45|-|ENST00000399127|COL25A1,COL25A1', 'ENSG00000188517|ENST00000399132|COL25A1'] 131953 26459 VTSAAGHA True PC9_epitope_Rep3 712.35040240252 712.34985496793 108.14 1 -1.4423164006525218 0.41044697633654686 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF'] 84668 8945 QDILNLYQEPD True NCI_RA007_Epitope_Rep1 1346.63541058382 1346.63430993586 38.795 2 -1.4423164100083077 0.41044697633654686 1.0 ['ENSG00000113300|ENST00000261951|CNOT6'] 64484 12354 LPQKYYWWFFQ True H1975_Epitope_Rep2 1604.7816213250396 1604.7805299358602 52.605 2 -1.442401094943438 0.41045116208415616 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 108162 6871 SYFSNAPV True PC9_epitope_Rep2 883.4075829254699 883.40648993586 31.831 2 -1.4424124875295268 0.41045116208415616 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 87199 3801 QPIPAKGP True NCI_RA007_Epitope_Rep4 806.46503823194 806.46394993586 20.802 2 -1.4424671534169526 0.41045116208415616 1.0 ['NEK1|p.R292G|1|0.25|ENSG00000137601|chr4:169577074-169577074|T/C|missense_variant'] 88068 20880 QRRALHKRW True PC9_epitope_Rep6 1249.72684084393 1249.7257499358602 93.088 2 -1.44247110627074 0.41045116208415616 1.0 ['ENST00000568754.5_2_16:30664323-30664383:+|nuORF'] 95287 20603 RVQAGPFP True PC9_epitope_Rep2 870.4711862415398 870.47008993586 84.683 2 -1.4425689901811236 0.41046493964781905 1.0 ['nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'nc|ENSG00000244482|Q6PI73-2|LILRA6'] 80388 24714 PGHPRKRAGR True PC9_epitope_Rep4 1130.6533415504998 1130.65224993586 103.56 2 -1.4425751021753266 0.41046493964781905 1.0 ['ENSG00000165886|ENST00000370664|UBTD1'] 87173 7435 QPGDPGVP True PC9_epitope_Rep5 765.36571811349 765.36462993586 33.553 2 -1.4426755338079098 0.41048351288822416 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 10887 24137 CYGGIKKG True PC9_epitope_Rep3 824.4214591678 824.42036993586 98.127 2 -1.4427953994356706 0.4104904011310658 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.R1054Pfs*53|1|0.12|ENSG00000138829|chr5:128345413-128345413|C/-|frameshift_variant', 'FBN2|p.D1008Mfs*99|1|0.14|ENSG00000138829|chr5:128345552-128345552|C/-|frameshift_variant', 'ENST00000511489.1_1_5:127701040-127712520:-|nuORF'] 22661 6343 ETPQTVPA True PC9_epitope_Rep5 841.4181476091699 841.4175949679301 29.373 1 -1.4428985999507744 0.4105089736399327 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 47545 8807 IVSSQVLTLP True H1975_Epitope_Rep3 1055.6226610721499 1055.6215699358602 38.883 2 -1.4429560457479738 0.410511064893791 1.0 ['ENSG00000214078|ENST00000397443|CPNE1', 'CPNE1|p.D427*|1|0.08|ENSG00000214078|chr20:35626761-35626762|-/A|frameshift_variant', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 81593 17906 PLKVSDYS True PC9_epitope_Rep2 907.46509780159 907.46400993586 74.179 2 -1.4429639649333483 0.410511064893791 1.0 ['nc|ENSG00000168060|Q9UQQ1-8|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-2|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-3|NAALADL1', 'ENSG00000168060|ENST00000358658|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-4|NAALADL1', 'ENST00000534568.1_1_11:64813497-64813763:-|nuORF', 'ENST00000532450.5_1_11:64812392-64813763:-|nuORF', 'ENST00000531174.1_1_11:64813610-64815186:-|nuORF'] 92826 21265 RPAQQDHWL True PC9_epitope_Rep5 1149.56794016069 1149.56684993586 86.846 2 -1.4431554657758225 0.41055300454508276 1.0 ['ENST00000445817.1_1_1:227618561-227618687:+|nuORF'] 46280 9361 ISPNKRYKWP True H1975_Epitope_Rep3 1287.70879073795 1287.70714490379 41.007 3 -1.4432072178940512 0.4105667784411548 1.0 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|35|2|sense'] 74133 22589 NECILLFSDLP True PC9_epitope_Rep5 1262.62167509598 1262.6205699358602 91.887 2 -1.443222146746083 0.4105667784411548 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 62553 20315 LLKKKSSESTT True H1975_Epitope_Rep2 1220.6976169175598 1220.6965099358601 84.186 2 -1.443257677904393 0.4105682508528436 1.0 ['ENSG00000171487|ENST00000390649|NLRP5', 'NLRP5|p.P424Lfs*6|1|0.54|ENSG00000171487|chr19:56027500-56027501|-/CC|frameshift_variant'] 38203 3422 HDYHRDLYNHL True NCI_RA007_Epitope_Rep2 1481.68000979081 1481.67835490379 17.967 3 -1.4432868988563754 0.4105682508528436 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4', 'ENST00000475531.1_1_4:38117521-38119821:+|nuORF', 'ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'ENST00000401554.5_1_4:38112345-38138953:+|nuORF', 'ENST00000407365.5_1_4:38113700-38138953:+|nuORF'] 99079 13409 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 58.263 2 -1.4432912820362058 0.4105682508528436 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 139877 9937 YPQWRRIH True PC9_epitope_Rep2 1154.6097454030198 1154.60864993586 43.553 2 -1.4432913741033682 0.4105682508528436 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 135606 24238 WLGPAWPWRAK True PC9_epitope_Rep2 1366.7298605356998 1366.72876993586 98.772 2 -1.4433238376637203 0.4105682508528436 1.0 ['nc|ENSG00000165716|Q5VUD6-2|DIPK1B', 'ENSG00000165716|ENST00000371692|DIPK1B'] 124081 23321 VGSLQHAR True PC9_epitope_Rep4 866.4722488706999 866.47170496793 97.962 1 -1.4433252611247516 0.4105682508528436 1.0 ['ENSG00000124194|ENST00000342560|GDAP1L1', 'nc|ENSG00000124194|Q96MZ0-4|GDAP1L1'] 87898 22971 QRIHLLLE True H1975_Epitope_Rep2 1020.6080140675199 1020.60690993586 94.807 2 -1.4433460744014106 0.4105682508528436 1.0 ['ENSG00000171487|ENST00000390649|NLRP5', 'NLRP5|p.R444S|1|0.3|ENSG00000171487|chr19:56027563-56027563|C/A|missense_variant'] 61043 24932 LIFMNERSR True PC9_epitope_Rep3 1164.60736244452 1164.6062699358602 101.26 2 -1.4433786755923717 0.41058202294446133 1.0 ['ENST00000425528.5_3_19:12834600-12834645:-|nuORF'] 50097 25695 KKKAAGKG True NCI_RA007_Epitope_Rep3 786.5075717502598 786.50646993586 111.12 2 -1.4433792812379118 0.41058202294446133 1.0 ['ENST00000541658.2_1_14:35704472-35704841:-|nuORF'] 49775 24609 KHAIVICN True H1975_Epitope_Rep3 896.49020743396 896.48965496793 102.4 1 -1.4434501008787248 0.410607476635514 1.0 ['ENSG00000122218|ENST00000241704|COPA', 'COPA|p.F641Lfs*71|1|0.18|ENSG00000122218|chr1:160298893-160298899|CTTGACA/-|frameshift_variant', 'COPA|p.R516L|1|0.44|ENSG00000122218|chr1:160305553-160305553|C/A|missense_variant', 'ENST00000481522.1_1_1:160275221-160275586:-|nuORF'] 282 20596 AAGPYHHH True PC9_epitope_Rep6 888.3990839304402 888.39798993586 91.951 2 -1.4434522747942318 0.410607476635514 1.0 ['HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant', 'ENSG00000106031|ENST00000649031|HOXA13'] 20996 8021 EQRKSEYFELK True H1975_Epitope_Rep1 1455.73579333143 1455.7346899358602 35.797 2 -1.4434778560044457 0.41063772619478744 1.0 ['ENSG00000179542|ENST00000356928|SLITRK4'] 94353 5837 RRRLREEFSFI True PC9_epitope_Rep5 1507.8371791385496 1507.83553490379 27.444 3 -1.4435775013948229 0.4106583804495117 1.0 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 92225 22804 RLKAGHGG True PC9_epitope_Rep2 794.4511195032999 794.45002993586 93.204 2 -1.4435815579216646 0.4106583804495117 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 118758 16162 TYYYELWWFWL True NCI_RA007_Epitope_Rep2 1668.7653025545596 1668.7642099358602 67.592 2 -1.443663356963697 0.4106583804495117 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 135340 17083 WGLAAGGG True NCI_RA007_Epitope_Rep3 687.33402406239 687.3334749679301 75.063 1 -1.4437177500064273 0.41066735196888104 1.0 ['nc|ENSG00000183688|Q8N5W9|RFLNB'] 125678 19573 VKMFIKYIKV True NCI_RA007_Epitope_Rep5 1267.7726368644699 1267.7715299358601 82.182 2 -1.4437286370947076 0.41066735196888104 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant'] 128607 15753 VPTTSLVL True PC9_epitope_Rep1 828.49566965388 828.49456993586 65.418 2 -1.4437497423431291 0.41066735196888104 1.0 ['ENST00000369528.9_2_1:115314278-115314449:-|nuORF'] 139811 23221 YPIHVPAG True NCI_RA007_Epitope_Rep3 852.4493881678 852.44828993586 100.85 2 -1.4437926814403788 0.41067423605270537 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L'] 127769 8829 VPDDFENR True H1975_Epitope_Rep1 990.4406739589 990.44012496793 38.883 1 -1.4438647035986463 0.4106804961805312 1.0 ['POLR3A|p.G812D|1|0.66|ENSG00000148606|chr10:78001019-78001019|C/T|missense_variant'] 60279 19412 LGRRKKTG True H1975_Epitope_Rep1 914.5773826455799 914.57628993586 80.848 2 -1.4439035289675095 0.4106804961805312 1.0 ['ENST00000261177.9_1_12:31147823-31148003:+|nuORF'] 98511 5361 SFLPFHLMLC True NCI_RA007_Epitope_Rep1 1206.59295825034 1206.5913149037901 24.932 3 -1.4439791823319377 0.4106804961805312 1.0 ['ENST00000293604.10_1_6:30620706-30620838:+|nuORF'] 33450 18391 GLAPPFLS True PC9_epitope_Rep3 800.4432401582001 800.44214993586 75.948 2 -1.4439953565539014 0.4106804961805312 1.0 ['ENST00000556418.1_3_14:93153644-93153968:+|nuORF'] 10875 7227 CWMIDADSRPK True H1975_Epitope_Rep3 1320.5954774314798 1320.5943699358602 32.77 2 -1.4440249830141738 0.4106804961805312 1.0 ['EGFR-VOPP1|1|fusion', 'EGFR|p.D1083Efs*11|1|0.36|ENSG00000146648|chr7:55202603-55202603|C/-|frameshift_variant', 'ENST00000485503.1_1_7:55266411-55268235:+|nuORF', 'ENSG00000146648|ENST00000275493|EGFR', 'nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4'] 60137 9176 LGMWCSPRGTW True NCI_RA007_Epitope_Rep1 1292.5794334445197 1292.5783299358602 39.693 2 -1.4440329082301882 0.4106804961805312 1.0 ['ENST00000290354.5_1_21:37507578-37507656:+|nuORF'] 91885 24726 RKKRTFPQILA True NCI_RA007_Epitope_Rep1 1356.8353882334 1356.8342899358602 102.38 2 -1.4440706404437216 0.4106873795479764 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2'] 3131 10215 AGARAVLVP True PC9_epitope_Rep1 852.5181364339599 852.51702993586 44.172 2 -1.444149662342889 0.4106942627546253 1.0 ['ENSG00000162009|ENST00000689027|SSTR5'] 99085 17126 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 72.648 2 -1.4441717362048103 0.41070114580048356 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 11396 6292 DESLKDFNM True H1975_Epitope_Rep2 1097.46992548185 1097.4688299358602 29.139 2 -1.4443143772580629 0.4107197084725175 1.0 ['ENSG00000159459|ENST00000290650|UBR1', 'ENST00000569066.2_2_15:43318731-43322188:-|nuORF'] 133534 24558 VWRIRQLLRR True NCI_RA007_Epitope_Rep5 1394.8735050776197 1394.87240993586 101.93 2 -1.44434409283871 0.4107466102981536 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 99650 8705 SIFWLMHL True PC9_epitope_Rep4 1045.54190865365 1045.5408099358601 40.979 2 -1.4444457732105989 0.4107466102981536 1.0 ['ENST00000369109.7_1_1:150239761-150239875:-|nuORF'] 75787 22013 NLMDKSHC True PC9_epitope_Rep5 946.4000721002201 946.39896993586 89.699 2 -1.444544975592138 0.4107466102981536 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 109816 11098 TEEFIIRIP True H1975_Epitope_Rep2 1116.6179100448799 1116.6168099358601 47.724 2 -1.4445574345279164 0.4107466102981536 1.0 ['ENSG00000013364|ENST00000357402|MVP', 'ENST00000565830.5_1_16:29841852-29843003:+|nuORF', 'ENST00000563096.1_1_16:29841852-29842056:+|nuORF'] 9020 11251 AVGVPIKV True PC9_epitope_Rep2 781.50617476793 781.50506993586 48.602 2 -1.4445605369525332 0.4107466102981536 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 57827 9635 LEESTVTQHAV True H1975_Epitope_Rep3 1212.5986311522802 1212.5975299358602 42.077 2 -1.4446356212309168 0.4107466102981536 1.0 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF'] 60377 20454 LGTGILASVHC True PC9_epitope_Rep5 1069.55901526977 1069.5579099358602 83.712 2 -1.4446365221478712 0.4107466102981536 1.0 ['ENSG00000186910|ENST00000334708|SERPINA11'] 81094 24308 PITVRVHCPIP True H1975_Epitope_Rep2 1230.6906981456598 1230.68905490379 100.03 3 -1.44466532226465 0.4107466102981536 1.0 ['PCDHGB2|p.K734Sfs*35|1|0.21|ENSG00000253910|chr5:141362333-141362333|C/-|frameshift_variant'] 54227 24434 KWDLALCL True H1975_Epitope_Rep3 960.5102741721998 960.50916993586 101.71 2 -1.4446932447011693 0.4107466102981536 1.0 ['ENSG00000131389|ENST00000622186|SLC6A6'] 22556 13946 ETIQVHRRYWR True H1975_Epitope_Rep3 1542.81677804714 1542.81568993586 58.959 2 -1.444753938550697 0.4107768486943523 1.0 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 92580 6147 RMPWPRQQGW True NCI_RA007_Epitope_Rep2 1340.6560439724399 1340.65494993586 28.519 2 -1.4448019041231166 0.4107837298111621 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 124702 11443 VGYSVPGR True PC9_epitope_Rep5 833.4395517600899 833.43844993586 49.014 2 -1.4448035706248192 0.4107906107672545 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 107010 5901 SVFESPGTCP True PC9_epitope_Rep2 1022.4378970775798 1022.43678993586 28.093 2 -1.4448691181754534 0.41079686113316827 1.0 ['nc|ENSG00000008988|P60866-2|RPS20'] 69291 18558 LTTREWPLNRA True PC9_epitope_Rep5 1355.7309827345098 1355.72988993586 76.407 2 -1.4448873698003917 0.41079686113316827 1.0 ['XKR3|p.I189T|1|0.1|ENSG00000172967|chr22:16799794-16799794|A/G|missense_variant'] 30831 10070 GAPEPEPEPE True PC9_epitope_Rep4 1050.4505699362599 1050.4494699358602 46.401 2 -1.444894315043393 0.41079686113316827 1.0 ['ENSG00000188060|ENST00000465518|RAB42'] 122634 9352 VGFVLGGF True NCI_RA007_Epitope_Rep2 794.4326754744998 794.43156993586 40.984 2 -1.4449016275981408 0.41079686113316827 1.0 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000590244.1_1_17:58543761-58603427:-|nuORF'] 93419 8218 RQEYLDQQL True PC9_epitope_Rep1 1191.58840082175 1191.58730993586 36.442 2 -1.4449126079045176 0.41079686113316827 1.0 ['ENSG00000197892|ENST00000524189|KIF13B'] 11452 20051 DFADNIKV True PC9_epitope_Rep1 920.46034677432 920.45924993586 81.952 2 -1.4449453576180817 0.41079686113316827 1.0 ['ENST00000467586.5_1_17:74084367-74085867:-|nuORF'] 57733 13207 LEEMASGLNK True PC9_epitope_Rep1 1090.5328600915798 1090.5317699358602 55.664 2 -1.445000902517988 0.4108156069769071 1.0 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54', 'ENST00000555535.1_1_14:35465915-35473764:+|nuORF'] 116634 6770 TVALSQQIR True PC9_epitope_Rep3 1014.5821932424999 1014.58108993586 31.062 2 -1.4451126612484169 0.4108156069769071 1.0 ['ENSG00000180530|ENST00000318948|NRIP1'] 576 6393 AARALVNL True PC9_epitope_Rep6 826.50248636982 826.5019349679301 33.192 1 -1.4451809662493733 0.4108156069769071 1.0 ['ENST00000530074.1_1_8:145192726-145193642:+|nuORF', 'ENSG00000235173|ENST00000347708|HGH1'] 72158 4221 MFWLLQAYECP True NCI_RA007_Epitope_Rep2 1399.6304659578698 1399.62880490379 21.058 3 -1.4452323103378364 0.4108156069769071 1.0 ['nc|ENSG00000179520|Q8NDX2-2|SLC17A8', 'ENSG00000179520|ENST00000323346|SLC17A8'] 84833 8911 QEAHWVLCEVL True PC9_epitope_Rep4 1325.6438075228898 1325.64270993586 41.813 2 -1.4452731179986298 0.4108156069769071 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 102719 6578 SMHASSNGG True NCI_RA007_Epitope_Rep3 846.32901533494 846.32790993586 32.924 2 -1.4453160629904516 0.4108156069769071 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF', 'ENST00000608673.1_1_1:172538260-172539320:+|nuORF'] 43481 9592 IGKKRGSKP True PC9_epitope_Rep6 969.6083484206898 969.60724993586 47.209 2 -1.445408414361784 0.4108156069769071 1.0 ['SETBP1|p.R729S|1|0.27|ENSG00000152217|chr18:44951527-44951527|G/T|missense_variant'] 71602 8691 MDHYRTFH True NCI_RA007_Epitope_Rep5 1105.47634827497 1105.4752499358601 40.094 2 -1.4454259952239006 0.4108156069769071 1.0 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'FIBP|p.D157Tfs*38|1|0.34|ENSG00000172500|chr11:65886365-65886365|C/-|frameshift_variant', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 39790 19947 HMGTSTMS True H1975_Epitope_Rep2 850.3313238340601 850.33022993586 82.71 2 -1.4454945285677325 0.4108156069769071 1.0 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13'] 127890 23124 VPGKLAPP True H1975_Epitope_Rep2 777.4748746396499 777.47376993586 95.406 2 -1.4455177314220897 0.4108156069769071 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 52940 13279 KPGMGGDP True H1975_Epitope_Rep2 757.3428744939299 757.34232496793 56.207 1 -1.4456565537758634 0.4108156069769071 1.0 ['ENSG00000161992|ENST00000409413|PRR35'] 118747 20348 TYWYLWRF True PC9_epitope_Rep4 1233.5971150306498 1233.5960099358601 86.413 2 -1.4456614042029594 0.4108156069769071 1.0 ['ENSG00000198162|ENST00000356554|MAN1A2'] 15812 16504 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 70.241 2 -1.445662930053411 0.4108156069769071 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 46407 12132 ISSLALSFYI True PC9_epitope_Rep4 1112.61176203528 1112.6106699358602 54.476 2 -1.4457145486435707 0.4108156069769071 1.0 ['ENST00000485159.5_1_9:82188246-82242462:+|nuORF'] 12409 8112 DITSDITSWEG True H1975_Epitope_Rep3 1222.5353621893798 1222.53426993586 36.179 2 -1.445723458830316 0.4108156069769071 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 256 12516 AAGFPPHG True NCI_RA007_Epitope_Rep3 752.3605731634 752.35946993586 56.463 2 -1.4457325341099148 0.4108156069769071 1.0 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.14|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 48346 5024 IYSSMVSQLY True H1975_Epitope_Rep3 1189.56891124713 1189.5678099358602 24.446 2 -1.44573380025268 0.4108156069769071 1.0 ['nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.F736Cfs*26|1|0.13|ENSG00000041515|chr13:108964805-108964806|-/GTGTAGAGCTCAGCTCGCGCTGGTGTGGGCGCAA|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16', 'MYO16|p.P470H|1|0.34|ENSG00000041515|chr13:108883108-108883108|C/A|missense_variant'] 136541 14825 WWFLHKFRIYP True H1975_Epitope_Rep1 1591.8452246411098 1591.84412993586 62.254 2 -1.4457532455886346 0.4108156069769071 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B'] 56197 16133 LAYHRKPI True PC9_epitope_Rep6 996.5868847001199 996.58578993586 74.399 2 -1.4458496548492328 0.4108341602942035 1.0 ['ENSG00000110975|ENST00000228567|SYT10'] 3361 3649 AGGVDNLHV True NCI_RA007_Epitope_Rep4 880.44028003608 880.43918993586 20.125 2 -1.4458846933817684 0.4108527131782946 1.0 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 80591 5682 PGQAERASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 26.928 2 -1.445985712383652 0.4108706310849618 1.0 ['ENST00000322048.11_1_16:4852562-4852868:-|nuORF'] 121230 6509 VETCFIPK True NCI_RA007_Epitope_Rep5 935.4786396907499 935.47754993586 31.703 2 -1.4460041788021585 0.4108706310849618 1.0 ['ENSG00000172139|ENST00000305815|SLC9C1', 'nc|ENSG00000172139|Q4G0N8-2|SLC9C1'] 56072 7404 LATGLSWGPF True H1975_Epitope_Rep3 1047.53893144819 1047.5378299358601 33.457 2 -1.446012613003362 0.4108706310849618 1.0 ['ENSG00000179588|ENST00000319555|ZFPM1'] 67808 10358 LTAEARIQA True H1975_Epitope_Rep1 971.5399940773499 971.53888993586 44.79 2 -1.4460142918059113 0.4108706310849618 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 124208 5511 VGTDPSIRP True PC9_epitope_Rep2 940.4977949122 940.49668993586 26.589 2 -1.4460491233652504 0.4108706310849618 1.0 ['ENST00000268099.13_1_15:75140986-75142897:-|nuORF'] 12789 12966 DLETVVNHI True PC9_epitope_Rep1 1038.53457434374 1038.53346993586 54.745 2 -1.4460808107364862 0.4108706310849618 1.0 ['nc|ENSG00000143994|Q96SE0-3|ABHD1', 'ENSG00000143994|ENST00000316470|ABHD1'] 119065 8834 VAGGYGIL True PC9_epitope_Rep5 748.41194002992 748.41084993586 38.926 2 -1.4462337822101294 0.41087750837584486 1.0 ['CON__Q6NXH9'] 69091 10614 LTRDETNYGIP True PC9_epitope_Rep2 1277.62518025329 1277.6240899358602 46.141 2 -1.4462771082005725 0.4108810346437576 1.0 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 75253 10916 NIEPMYQYSL True H1975_Epitope_Rep3 1256.57472490356 1256.57362993586 47.075 2 -1.4463012769511043 0.4108810346437576 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'ENSG00000118997|ENST00000312428|DNAH7'] 139211 11965 YLFEFHEDIEV True NCI_RA007_Epitope_Rep1 1439.66089705567 1439.65980993586 50.528 2 -1.4463113232672082 0.4108810346437576 1.0 ['CDH10|p.V393F|1|0.37|ENSG00000040731|chr5:24509645-24509645|C/A|missense_variant'] 123495 9899 VGPGLDVR True PC9_epitope_Rep5 811.45520182423 811.45410993586 43.046 2 -1.4463971678529999 0.4108810346437576 1.0 ['ENST00000526878.5_1_11:459265-459352:+|nuORF'] 104592 20997 SQRIQRPGR True PC9_epitope_Rep6 1096.62137271588 1096.62026993586 93.588 2 -1.4464094060531667 0.4108810346437576 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 125249 10732 VIKVVKGG True H1975_Epitope_Rep2 798.5327238689398 798.53162993586 46.308 2 -1.4464244179169534 0.4108810346437576 1.0 ['ENSG00000111331|ENST00000228928|OAS3'] 76652 12530 NQSDQLPGWSP True H1975_Epitope_Rep1 1227.5520153130299 1227.5514749679298 53.24 1 -1.44645906497716 0.4108810346437576 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 41738 8801 IAMALMTP True PC9_epitope_Rep1 846.43433235062 846.43322993586 38.695 2 -1.4464734285141272 0.4108810346437576 1.0 ['ENST00000446760.2_1:146412138-146412798:+|nuORF'] 44866 13861 INILSRLPETL True H1975_Epitope_Rep1 1267.7499868435898 1267.74888993586 58.465 2 -1.4464936290230894 0.4108810346437576 1.0 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 70721 22898 LWRLPEKV True PC9_epitope_Rep2 1039.6178504752297 1039.61674993586 93.581 2 -1.4465133365448763 0.41088791101047006 1.0 ['HTR3A|p.D199Rfs*29|1|0.3|ENSG00000166736|chr11:113986062-113986063|-/C|frameshift_variant', 'HTR3A|p.N269Tfs*20|1|0.15|ENSG00000166736|chr11:113986611-113986611|C/-|frameshift_variant', 'HTR3A|p.F454Sfs*6|1|0.17|ENSG00000166736|chr11:113989685-113989685|A/-|frameshift_variant', 'nc|ENSG00000166736|P46098-3|HTR3A', 'ENSG00000166736|ENST00000504030|HTR3A', 'nc|ENSG00000166736|P46098-4|HTR3A', 'nc|ENSG00000166736|P46098-2|HTR3A', 'nc|ENSG00000166736|P46098-5|HTR3A'] 15752 3545 ECRRERRWDRW True NCI_RA007_Epitope_Rep2 1646.7960596858998 1646.79385987172 18.441 4 -1.4466169584220219 0.4109250072950102 1.0 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF'] 7760 10679 ASRCKNGG True H1975_Epitope_Rep3 791.3708205772699 791.3702749679301 46.151 1 -1.4466328089802747 0.4109250072950102 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'MUC17|p.N4447Kfs*5|1|0.28|ENSG00000169876|chr7:101053409-101053410|-/A|frameshift_variant', 'ENSG00000169876|ENST00000306151|MUC17'] 34506 5876 GPPGPASLG True NCI_RA007_Epitope_Rep4 751.38645355807 751.38534993586 29.226 2 -1.4467191706277982 0.4109435547878052 1.0 ['ENSG00000116017|ENST00000263620|ARID3A'] 123504 6943 VGPGWEDG True NCI_RA007_Epitope_Rep5 815.3449826689099 815.34388993586 33.391 2 -1.4467386589592064 0.4109573052592264 1.0 ['ENST00000431180.5_1_3:47058436-47058586:-|nuORF'] 56426 9326 LDEFQKKWH True NCI_RA007_Epitope_Rep1 1229.61930702721 1229.61820993586 40.271 2 -1.4467584124847146 0.4109573052592264 1.0 ['CON__P15497'] 125743 20620 VKSGAAAAA True PC9_epitope_Rep4 744.4130026590799 744.4124549679301 87.471 1 -1.4468398705902916 0.41098752319704945 1.0 ['nc|ENSG00000185760|Q9NR82-4|KCNQ5', 'KCNQ5|p.C184Lfs*6|1|0.23|ENSG00000185760|chr6:73041990-73041991|-/C|frameshift_variant', 'nc|ENSG00000185760|Q9NR82-5|KCNQ5', 'nc|ENSG00000185760|Q9NR82-2|KCNQ5', 'ENSG00000185760|ENST00000370398|KCNQ5', 'nc|ENSG00000185760|Q9NR82-7|KCNQ5', 'nc|ENSG00000185760|Q9NR82-3|KCNQ5', 'nc|ENSG00000185760|Q9NR82-6|KCNQ5'] 68728 10392 LTKTQELGRDY True H1975_Epitope_Rep2 1322.68302948258 1322.6819299358601 44.984 2 -1.446963493101303 0.41100606909430437 1.0 ['ENST00000491234.1_1_2:85922299-85923236:+|nuORF', 'ENST00000482900.5_1_2:85921541-85923236:+|nuORF', 'ENST00000489214.5_1_2:85922010-85923236:+|nuORF', 'nc|ENSG00000115523|P22749-2|GNLY', 'ENST00000533041.5_1_2:85922010-85923777:+|nuORF', 'ENSG00000115523|ENST00000263863|GNLY', 'ENST00000489980.5_1_2:85922183-85924200:+|nuORF'] 123468 16804 VGPARRLS True H1975_Epitope_Rep1 854.50863437942 854.50752993586 70.044 2 -1.4470762601874423 0.41102189440268894 1.0 ['ENST00000288014.6_1_14:24025414-24025621:+|nuORF'] 130838 13023 VTATYRQAL True PC9_epitope_Rep1 1021.55564414149 1021.55454993586 54.963 2 -1.4470929687006888 0.41102189440268894 1.0 ['ENSG00000163545|ENST00000367157|NUAK2'] 33920 10086 GLQYRTVS True PC9_epitope_Rep2 922.4872302285 922.48612993586 44.126 2 -1.4471008463463446 0.41102189440268894 1.0 ['ENSG00000185736|ENST00000381312|ADARB2'] 95416 23204 RWFKFRKRKGE True PC9_epitope_Rep4 1536.8789843808797 1536.87733490379 97.483 3 -1.4471390625224891 0.41102189440268894 1.0 ['nc|ENSG00000164542|Q8NCT3|MATCAP2'] 81969 16001 PLTLSPAAPA True PC9_epitope_Rep4 936.5280324113198 936.52748496793 69.48 1 -1.447249633703364 0.41103084481893404 1.0 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 89798 19356 RALKQRQQQLH True NCI_RA007_Epitope_Rep3 1404.80621336344 1404.80455490379 84.492 3 -1.4472519156031411 0.41103084481893404 1.0 ['ENSG00000185298|ENST00000329214|CCDC137'] 79032 8601 PALHTAIN True PC9_epitope_Rep3 835.45520182423 835.45410993586 38.033 2 -1.447254106052288 0.41103084481893404 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4', 'FRMPD4|p.T1300S|1|0.18|ENSG00000169933|chrX:12718724-12718724|A/T|missense_variant'] 139357 17752 YLLQVLRYLI True NCI_RA007_Epitope_Rep5 1292.7856440763198 1292.78454993586 75.067 2 -1.4474385694462717 0.4110679317065201 1.0 ['GAPVD1|p.R1391Gfs*8|1|0.07|ENSG00000165219|chr9:125360595-125360595|C/-|frameshift_variant', 'nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1'] 130033 8063 VSARRDAYRR True H1975_Epitope_Rep1 1248.6799502211597 1248.6788499358602 35.957 2 -1.4474388064528785 0.4110679317065201 1.0 ['ENSG00000087510|ENST00000201031|TFAP2C'] 32618 24775 GGKAALAPA True PC9_epitope_Rep2 754.43373810366 754.43264993586 100.98 2 -1.4476388640280937 0.41108167718896965 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 124690 10656 VGYRADGI True PC9_epitope_Rep1 849.4344663796498 849.43391496793 45.879 1 -1.4476979280972027 0.41108167718896965 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557314.5_1_14:20839728-20850189:-|nuORF'] 83020 21048 PSICKRKKVWL True PC9_epitope_Rep6 1356.8063966042398 1356.8052899358602 93.782 2 -1.447729326873128 0.4110837524651955 1.0 ['nc|ENSG00000153246|Q13018-2|PLA2R1', 'ENSG00000153246|ENST00000283243|PLA2R1'] 140618 24618 YRRQLQARTIE True NCI_RA007_Epitope_Rep1 1432.7898945929594 1432.7887899358602 101.96 2 -1.4477602159366734 0.4110837524651955 1.0 ['ENSG00000148798|ENST00000369849|INA'] 124033 19196 VGSGQAAVP True PC9_epitope_Rep6 784.40791727864 784.4073649679301 86.49 1 -1.447913201362902 0.411113963638061 1.0 ['ENST00000401950.6_1_22:30421796-30421910:+|nuORF'] 130540 24965 VSRALGVK True H1975_Epitope_Rep1 828.5181364339599 828.51702993586 103.38 2 -1.448148988589939 0.4111908512748702 1.0 ['ENST00000426923.2_1_4:84026116-84028983:-|nuORF', 'ENST00000509973.5_1_4:84026116-84035878:-|nuORF'] 17044 7463 EGETTSHLIGM True H1975_Epitope_Rep1 1173.53358836757 1173.5324899358602 33.703 2 -1.448298040967804 0.41127460704575425 1.0 ['ENST00000401028.2_1_1:91793937-91794252:+|nuORF'] 116399 24626 TTILLLKLL True NCI_RA007_Epitope_Rep1 1026.7052684972998 1026.70467496793 101.99 1 -1.448329138285259 0.41127460704575425 1.0 ['ENST00000317025.12_1_8:38131368-38131458:-|nuORF'] 137257 23944 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 99.476 2 -1.4485003090549466 0.41130481458143714 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 85105 8165 QELEELRKSLQ True NCI_RA007_Epitope_Rep1 1371.73579333143 1371.7346899358602 35.758 2 -1.448633604023337 0.4113103641391219 1.0 ['nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 13847 2376 DQNLQELEKW True H1975_Epitope_Rep1 1301.6251802532897 1301.62354490379 12.27 3 -1.4486608246628168 0.4113103641391219 1.0 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 36917 23705 GVLQKGGP True NCI_RA007_Epitope_Rep2 754.4337381036598 754.4331849679301 99.473 1 -1.4486654137971822 0.4113103641391219 1.0 ['ENST00000303991.4_1_5:176025423-176025792:-|nuORF'] 3509 15149 AGLPEFKEL True NCI_RA007_Epitope_Rep5 1002.5385970950199 1002.53750993586 64.95 2 -1.448669336498161 0.4113103641391219 1.0 ['ENSG00000167306|ENST00000285039|MYO5B', 'MYO5B|p.L1524Tfs*10|1|0.05|ENSG00000167306|chr18:49843282-49843283|-/T|frameshift_variant', 'MYO5B|p.I1001Dfs*12|1|0.24|ENSG00000167306|chr18:49894986-49894987|-/T|frameshift_variant', 'MYO5B|p.M621*|1|0.11|ENSG00000167306|chr18:49937289-49937289|T/-|frameshift_variant'] 65465 24806 LRKKLYELL True NCI_RA007_Epitope_Rep5 1174.74377926434 1174.74327496793 102.9 1 -1.448761428730748 0.4113103641391219 1.0 ['ENST00000565367.5_1_15:55647651-55647789:+|nuORF'] 98757 15454 SGHFFFST True NCI_RA007_Epitope_Rep5 928.40791727864 928.40682993586 66.142 2 -1.4487634117055184 0.4113103641391219 1.0 ['ENST00000368715.5_1_1:153516097-153516238:-|nuORF'] 86489 27046 QKVPKPLC True PC9_epitope_Rep5 911.5262585895098 911.52516993586 110.65 2 -1.4487909167339046 0.4113103641391219 1.0 ['nc|ENSG00000111305|Q2KHT4-5|GSG1', 'nc|ENSG00000111305|Q2KHT4-2|GSG1', 'nc|ENSG00000111305|Q2KHT4-3|GSG1', 'nc|ENSG00000111305|Q2KHT4-6|GSG1', 'nc|ENSG00000111305|Q2KHT4-8|GSG1', 'nc|ENSG00000111305|Q2KHT4|GSG1', 'ENSG00000111305|ENST00000651961|GSG1', 'nc|ENSG00000111305|Q2KHT4-4|GSG1', 'nc|ENSG00000111305|Q2KHT4-7|GSG1'] 48492 20236 KAGKGGTG True PC9_epitope_Rep3 674.3711378470999 674.3705849679301 83.098 1 -1.4487990334341898 0.4113103641391219 1.0 ['ENSG00000268041|ENST00000597630|ERFL'] 62549 24606 LLKILLVLHT True H1975_Epitope_Rep2 1161.7849158003298 1161.78328490379 101.2 3 -1.4488185451741322 0.4113103641391219 1.0 ['ENST00000342756.9_1_4:57357643-57361536:+|nuORF'] 121747 11830 VFLVSVPAAP True H1975_Epitope_Rep1 998.5800679841798 998.57896993586 50.5 2 -1.4488292701626515 0.4113103641391219 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 101906 11290 SLPTAPLAP True NCI_RA007_Epitope_Rep4 865.49091862661 865.49037496793 50.322 1 -1.448830003502408 0.4113103641391219 1.0 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 124004 13315 VGSFASTL True PC9_epitope_Rep5 780.40176926904 780.40066993586 56.228 2 -1.4488909100092355 0.4113172325282931 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 21069 14844 EQVRKQENEFR True H1975_Epitope_Rep3 1461.7324392864896 1461.7313499358602 62.481 2 -1.4489542735821492 0.41131930184804927 1.0 ['nc|ENSG00000160401|Q5JU67-2|CFAP157', 'ENSG00000160401|ENST00000373295|CFAP157'] 121310 17050 VETVELKI True NCI_RA007_Epitope_Rep5 929.5433481222899 929.54224993586 72.345 2 -1.448967704267686 0.41131930184804927 1.0 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1'] 125530 22308 VKGASGKG True PC9_epitope_Rep6 702.4024379753799 702.4018849679301 98.778 1 -1.449024861874078 0.4113261698925484 1.0 ['ENST00000358215.8_1_2:220363644-220363875:+|nuORF'] 100206 20667 SIVPGPAAP True PC9_epitope_Rep1 807.4490538146299 807.44794993586 84.319 2 -1.449069531137219 0.4113330377767926 1.0 ['ENST00000380834.6_1_2:25016041-25016209:+|nuORF'] 88009 18693 QRNVNSVHMP True PC9_epitope_Rep3 1180.5771249453999 1180.57602993586 77.123 2 -1.4490803746523386 0.4113399055007875 1.0 ['ENSG00000173239|ENST00000404743|LIPM'] 74220 8768 NEGYAQLRHHL True H1975_Epitope_Rep1 1336.66363145068 1336.6625299358602 38.656 2 -1.4490993705462647 0.4113467730645387 1.0 ['ASCL3|p.R136Kfs*8|1|0.17|ENSG00000176009|chr11:8937755-8937756|-/T|frameshift_variant', 'ENSG00000176009|ENST00000531618|ASCL3'] 41401 17865 HYFRRVPRDW True NCI_RA007_Epitope_Rep2 1430.7319857940197 1430.73034490379 74.23 3 -1.4491682816542835 0.41136530676528577 1.0 ['ENST00000438748.5_1_2:113299624-113300117:+|nuORF', 'ENST00000263331.9_1_2:113299748-113300117:+|nuORF'] 79848 15930 PEIFQFLQQ True PC9_epitope_Rep4 1148.5866099165999 1148.58550993586 69.201 2 -1.4493569733326808 0.41137837711726005 1.0 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.S1459Kfs*2|1|0.14|ENSG00000173193|chr3:122718525-122718526|-/A|frameshift_variant'] 117791 21455 TVWDPLWSR True PC9_epitope_Rep6 1158.5821932425 1158.58054490379 95.402 3 -1.4494087652304655 0.41137837711726005 1.0 ['ENST00000391833.5_1_19:50377435-50377513:-|nuORF'] 75336 9901 NIPRMIYC True PC9_epitope_Rep5 1008.4884931817999 1008.48738993586 43.054 2 -1.4494187529577882 0.41137837711726005 1.0 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'IQGAP2|p.L938Ffs*10|1|0.08|ENSG00000145703|chr5:76668813-76668813|C/-|frameshift_variant', 'IQGAP2|p.P1231Lfs*7|1|0.14|ENSG00000145703|chr5:76683143-76683143|C/-|frameshift_variant', 'IQGAP2|p.E316Gfs*3|1|0.18|ENSG00000145703|chr5:76597475-76597476|-/A|frameshift_variant'] 89262 18549 QVVKSIKI True PC9_epitope_Rep2 913.5960524014898 913.59494993586 76.699 2 -1.449462473352907 0.41137837711726005 1.0 ['ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 84832 9350 QEAHWVLCEVL True PC9_epitope_Rep2 1325.6438075228898 1325.64270993586 41.302 2 -1.4494678154485088 0.41137837711726005 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 41907 13783 IDAQDRVLLLH True PC9_epitope_Rep3 1291.72483472491 1291.72372993586 58.095 2 -1.449470705394738 0.41137837711726005 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 58016 11446 LEHLRITV True PC9_epitope_Rep6 979.58146496651 979.58036993586 55.087 2 -1.449493412330098 0.41137837711726005 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 84477 21768 QAKRHIHQHRQ True NCI_RA007_Epitope_Rep1 1437.78139559793 1437.78028993586 89.094 2 -1.4495904367274477 0.4113804446725614 1.0 ['nc|ENSG00000054523|O60333-3|KIF1B'] 66293 10154 LSFNYLLFFFY True H1975_Epitope_Rep1 1472.7380251775598 1472.7369299358602 43.996 2 -1.4495923342541357 0.4113804446725614 1.0 ['ENST00000306442.4_1_5:122359405-122359573:-|nuORF'] 112078 10989 TITTEKQSQP True H1975_Epitope_Rep3 1131.57716743171 1131.57606993586 47.357 2 -1.4497004993062637 0.41138731088221914 1.0 ['ENSG00000185862|ENST00000330927|EVI2B', 'nc|ENSG00000185862|P34910-2|EVI2B'] 112520 6163 TLDTAQLGPPS True NCI_RA007_Epitope_Rep2 1098.5557037111398 1098.55460993586 28.58 2 -1.4498077677999428 0.4114058417319896 1.0 ['ENST00000380535.8_1_17:7461935-7461992:+|nuORF'] 44438 7251 ILHSVYECIAK True NCI_RA007_Epitope_Rep1 1274.66929399474 1274.66818993586 32.195 2 -1.4499239597376616 0.41147103080637826 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF'] 42073 13741 IDKYREVL True PC9_epitope_Rep6 1034.5760452328998 1034.57494993586 64.648 2 -1.4499941675976398 0.4114758878068692 1.0 ['ENST00000480739.2_1_12:58068877-58069030:+|nuORF'] 122843 5734 VGGVQGKR True PC9_epitope_Rep2 799.46643521427 799.46532993586 27.446 2 -1.4500123194708279 0.4114758878068692 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 119537 8112 VASLWPGQGH True PC9_epitope_Rep2 1050.52467836638 1050.5235899358602 36.561 2 -1.4501106021823142 0.4114758878068692 1.0 ['ENST00000409429.5_1_2:74783165-74783511:+|nuORF'] 136291 17983 WSLEDLMQIR True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 78.804 3 -1.4502158447619915 0.4114758878068692 1.0 ['ENST00000261015.4_1_2:203776641-203776755:-|nuORF'] 108209 12541 SYHLDGLEP True PC9_epitope_Rep6 1029.47672511445 1029.47562993586 59.674 2 -1.4502487390988517 0.4114758878068692 1.0 ['ENSG00000114270|ENST00000681320|COL7A1', 'nc|ENSG00000114270|Q02388-2|COL7A1'] 62875 24732 LLNGKKRRRWI True NCI_RA007_Epitope_Rep5 1438.8997198254597 1438.89862993586 102.62 2 -1.4503353206807952 0.4114758878068692 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 116997 15466 TVGYIRENI True PC9_epitope_Rep3 1063.56620882519 1063.5651099358602 64.642 2 -1.450375228173078 0.4114758878068692 1.0 ['IQGAP2|p.L1418Ffs*12|1|0.15|ENSG00000145703|chr5:76698031-76698032|-/T|frameshift_variant', 'ENSG00000145703|ENST00000274364|IQGAP2', 'IQGAP2|p.L938Ffs*10|1|0.08|ENSG00000145703|chr5:76668813-76668813|C/-|frameshift_variant', 'IQGAP2|p.P1231Lfs*7|1|0.14|ENSG00000145703|chr5:76683143-76683143|C/-|frameshift_variant'] 109587 6140 TDYHVRVYA True H1975_Epitope_Rep2 1122.54580773378 1122.54415490379 28.596 3 -1.4504129504090018 0.4114758878068692 1.0 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 118822 7233 VAAKNQQI True PC9_epitope_Rep4 870.4923156089399 870.49120993586 35.126 2 -1.450485063502654 0.4114758878068692 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 70262 19140 LVRKARSHIG True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 80.492 2 -1.4505445424497807 0.4114758878068692 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 93915 24852 RRGALQHRIRV True H1975_Epitope_Rep2 1360.82761751436 1360.8265299358602 102.16 2 -1.450547410150517 0.4114758878068692 1.0 ['ENSG00000176531|ENST00000292140|PHLDB3'] 78969 14107 PAIHKSIAI True PC9_epitope_Rep2 948.5756513100799 948.57454993586 59.536 2 -1.4505507763510266 0.4114758878068692 1.0 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1'] 81772 11801 PLPLPCSVH True PC9_epitope_Rep4 961.5055231449301 961.50442993586 53.16 2 -1.4505775139151091 0.4114758878068692 1.0 ['ENST00000463188.5_1_2:219529923-219536693:-|nuORF', 'ENST00000295704.6_1_2:219529923-219530909:-|nuORF'] 134967 12983 WAWPRTPWRRW True H1975_Epitope_Rep1 1596.8214695047598 1596.82036993586 55.018 2 -1.4505983524264743 0.4114758878068692 1.0 ['ENST00000608648.1_1_19:18235548-18239224:+|nuORF'] 79513 22903 PCIICCVC True NCI_RA007_Epitope_Rep3 852.33660953864 852.33550993586 99.546 2 -1.4506105364345563 0.4114758878068692 1.0 ['nc|ENSG00000137393|Q7Z419-2|RNF144B', 'ENSG00000137393|ENST00000259939|RNF144B'] 19340 8777 ELLEVQQPDP True NCI_RA007_Epitope_Rep2 1166.58191845898 1166.58082993586 38.787 2 -1.4506287607622763 0.4114758878068692 1.0 ['ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A', 'ENST00000494435.5_1_21:47924311-47965916:+|nuORF'] 117374 10714 TVPKDRTSY True PC9_epitope_Rep6 1065.54547338061 1065.54436993586 52.023 2 -1.4506808026345601 0.41149441373358525 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.K1083Qfs*87|1|0.22|ENSG00000116147|chr1:175355505-175355506|-/G|frameshift_variant'] 36353 12076 GVESPLQTRL True PC9_epitope_Rep6 1098.6033226099 1098.6022299358601 57.771 2 -1.4507752723801322 0.411523257576641 1.0 ['ENST00000558061.1_1_15:48938242-48938584:+|nuORF'] 116474 15729 TTLTSRRTTRI True NCI_RA007_Epitope_Rep1 1304.75244645508 1304.7513499358602 65.277 2 -1.4508304376653853 0.411523257576641 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 113787 22309 TMWAVLELGAE True NCI_RA007_Epitope_Rep5 1218.5954603481398 1218.59380490379 92.962 3 -1.450843828357212 0.411523257576641 1.0 ['nc|ENSG00000155463|Q15070-2|OXA1L', 'ENSG00000155463|ENST00000612549|OXA1L'] 41882 22464 ICILYVYI True PC9_epitope_Rep6 998.5510763550199 998.54996993586 99.402 2 -1.4508642583557527 0.411523257576641 1.0 ['ENST00000407010.6_2_7:16128723-16129239:-|nuORF'] 41904 9140 IDAQDRVLLLH True H1975_Epitope_Rep1 1291.72483472491 1291.72372993586 40.063 2 -1.4509172067189215 0.411523257576641 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 53843 24636 KTGKKGKG True NCI_RA007_Epitope_Rep3 802.5024863698198 802.50138993586 106.55 2 -1.4509476835529287 0.411523257576641 1.0 ['ENSG00000137077|ENST00000259607|CCL21'] 117827 18274 TVYCVKAR True PC9_epitope_Rep5 938.5007721176598 938.49966993586 75.304 2 -1.450961689062946 0.411523257576641 1.0 ['nc|ENSG00000142166|P17181-2|IFNAR1', 'nc|ENSG00000142166|P17181-4|IFNAR1', 'nc|ENSG00000142166|P17181-3|IFNAR1', 'ENSG00000142166|ENST00000270139|IFNAR1'] 104869 18668 SRAVARPL True H1975_Epitope_Rep2 868.52428444356 868.52318993586 77.485 2 -1.4510316440787594 0.411523257576641 1.0 ['ENST00000457926.5_1_16:90039026-90045221:+|nuORF', 'ENST00000423742.1_1_16:90039026-90044235:+|nuORF', 'ENST00000431757.5_2_16:90039026-90045221:+|nuORF', 'ENST00000418696.5_2_16:90039026-90046656:+|nuORF', 'ENST00000450026.1_1_16:90039026-90044235:+|nuORF'] 86406 23358 QKHKKKEAAL True H1975_Epitope_Rep1 1179.7087907379498 1179.70714490379 97.088 3 -1.451038472080957 0.411523257576641 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 130782 12459 VTAFQGKGHSL True PC9_epitope_Rep6 1143.6036569630699 1143.60254993586 59.349 2 -1.451038766416253 0.411523257576641 1.0 ['ENSG00000175073|ENST00000310421|VCPIP1'] 65533 10273 LRRAPRLWKV True NCI_RA007_Epitope_Rep4 1293.81459321917 1293.8129549037901 46.368 3 -1.4510450506535952 0.411523257576641 1.0 ['ENSG00000232070|ENST00000556585|TMEM253'] 82453 24404 PPPTKKPEVV True H1975_Epitope_Rep3 1090.6386454894598 1090.63754993586 101.6 2 -1.451129706766977 0.4115301196389841 1.0 ['KIAA1522|p.F728Sfs*88|1|0.28|ENSG00000162522|chr1:32771538-32771538|T/-|frameshift_variant', 'ENSG00000162522|ENST00000401073|KIAA1522', 'nc|ENSG00000162522|Q9P206|NHSL3', 'nc|ENSG00000162522|Q9P206-3|NHSL3'] 125250 10804 VIKVVKGG True NCI_RA007_Epitope_Rep5 798.5327238689398 798.53162993586 48.192 2 -1.4512054405363617 0.41154384328358207 1.0 ['ENSG00000111331|ENST00000228928|OAS3'] 114100 9685 TPGAGPVP True NCI_RA007_Epitope_Rep2 694.3649898375 694.36444496793 42.291 1 -1.451215531382506 0.41154384328358207 1.0 ['ENST00000369800.5_1_5:172116953-172117430:+|nuORF'] 60008 19323 LGIVMARAI True PC9_epitope_Rep2 942.5684577546599 942.56736993586 79.7 2 -1.4512955137858408 0.4115740254894416 1.0 ['nc|ENSG00000169507|Q08AI6-2|SLC38A11', 'nc|ENSG00000169507|Q08AI6|SLC38A11', 'ENSG00000169507|ENST00000685975|SLC38A11'] 141012 20581 YSKGICKEIY True PC9_epitope_Rep3 1202.6005457285798 1202.59944993586 84.431 2 -1.451445411970229 0.4115946084604263 1.0 ['ENST00000381298.6_1_5:55250720-55250762:-|nuORF'] 128200 6350 VPMNSALIKW True PC9_epitope_Rep4 1157.6267009067699 1157.62504490379 31.502 3 -1.4514714432805083 0.4115946084604263 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 95030 9285 RTRRRRVRDPW True NCI_RA007_Epitope_Rep1 1552.8923430292396 1552.89124993586 40.111 2 -1.451481617330702 0.4115946084604263 1.0 ['ENST00000401044.7_1_1:59134235-59156019:-|nuORF', 'nc|ENSG00000162601|Q5VVJ2-2|MYSM1', 'ENSG00000162601|ENST00000472487|MYSM1'] 36924 20390 GVLQNSAP True PC9_epitope_Rep4 784.40791727864 784.4073649679301 86.575 1 -1.4514933721829495 0.4115966700090945 1.0 ['ENST00000473484.1_1_3:46713038-46716081:-|nuORF', 'nc|ENSG00000178038|Q60I27-4|ALS2CL'] 87240 8059 QPLISTHDHR True PC9_epitope_Rep4 1202.6156186291 1202.6145299358602 38.451 2 -1.4515208687624024 0.4115966700090945 1.0 ['ENST00000288937.6_1_11:6703207-6703348:-|nuORF'] 37023 17828 GVPDAGMK True NCI_RA007_Epitope_Rep3 773.37417462221 773.37362496793 78.17 1 -1.4516236111499445 0.41162684948756517 1.0 ['ENST00000492361.1_1_1:12227075-12267074:+|nuORF', 'ENSG00000028137|ENST00000376259|TNFRSF1B'] 117062 8736 TVIGSKLN True NCI_RA007_Epitope_Rep4 830.4861675993401 830.48506993586 40.396 2 -1.4516426891174692 0.41163370954202033 1.0 ['ENST00000535387.5_2_9:95072482-95076565:-|nuORF'] 109396 8426 TDAYHPIITN True H1975_Epitope_Rep1 1143.5560380643099 1143.5549499358601 37.338 2 -1.4516739370262637 0.4116405694365097 1.0 ['nc|ENSG00000111452|Q6QNK2-4|ADGRD1', 'ENSG00000111452|ENST00000261654|ADGRD1'] 59403 14535 LFLNLNHRF True PC9_epitope_Rep3 1172.6454622054 1172.6438249037901 61.029 3 -1.4518668592030453 0.41165428874561333 1.0 ['ENST00000265748.6_2_7:36429459-36435956:+|nuORF'] 78125 8345 NWQEWRQRDEQ True NCI_RA007_Epitope_Rep1 1573.7022017873699 1573.7011099358601 36.46 2 -1.4518969583205412 0.41165428874561333 1.0 ['nc|ENSG00000165113|Q5VSY0-2|GKAP1', 'ENSG00000165113|ENST00000376371|GKAP1'] 98816 20336 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 84.273 2 -1.4519145299224907 0.4116728069766357 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 13031 10936 DLNMESRPV True PC9_epitope_Rep4 1059.50189431647 1059.5007899358602 49.834 2 -1.4519214886619132 0.4116796660953913 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D'] 74643 15036 NGLKSLSA True NCI_RA007_Epitope_Rep3 788.43921740692 788.43812993586 66.604 2 -1.452036131899389 0.41168172544447684 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 41774 10333 IAQARLGTPA True H1975_Epitope_Rep3 996.5716285587998 996.57052993586 44.798 2 -1.45205437144832 0.41168172544447684 1.0 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 120301 8261 VEDRRRTY True NCI_RA007_Epitope_Rep1 1093.5628547802498 1093.56174993586 36.132 2 -1.452062167426365 0.41168858421936205 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3'] 120304 11204 VEDSRTGLPP True H1975_Epitope_Rep1 1069.54038800017 1069.53928993586 48.065 2 -1.4521262683793135 0.4117139592902609 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'MAP2|p.E1172*|1|0.31|ENSG00000078018|chr2:209695683-209695684|-/T|frameshift_variant', 'MAP2|p.I1173Yfs*12|1|0.41|ENSG00000078018|chr2:209695685-209695685|A/-|frameshift_variant'] 52492 23003 KKWQGLQEMR True NCI_RA007_Epitope_Rep5 1302.6866753943798 1302.68503490379 95.716 3 -1.4521456734796196 0.4117139592902609 1.0 ['nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'ENST00000563518.5_1_15:41796702-41799561:-|nuORF'] 136627 11366 WWQQQWQQQWR True NCI_RA007_Epitope_Rep1 1686.7803925384198 1686.77928993586 48.184 2 -1.4521984284369145 0.4117324753144709 1.0 ['ENST00000253055.7_1_19:40718724-40719087:+|nuORF'] 16905 10468 EFLVRSFRR True H1975_Epitope_Rep3 1208.6778249628398 1208.67616490379 45.327 3 -1.4522342656598273 0.41173933317789696 1.0 ['ENSG00000230778|ENST00000434396|ANKRD63'] 96397 15287 RYYYKREILER True H1975_Epitope_Rep1 1587.8521604963496 1587.85106993586 64.071 2 -1.4522876482816292 0.4117413909678021 1.0 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 55090 15090 LAAAPRLAL True PC9_epitope_Rep4 894.5650866263799 894.56398993586 65.977 2 -1.4523021107823615 0.4117413909678021 1.0 ['ENSG00000268041|ENST00000597630|ERFL'] 56198 18372 LAYIVQKL True PC9_epitope_Rep2 946.5851533646199 946.58404993586 75.997 2 -1.4523611131730487 0.4117619630471528 1.0 ['SACS|p.D842Y|1|0.18|ENSG00000151835|chr13:23341352-23341352|C/A|missense_variant'] 58428 15301 LEPDPKLRATA True PC9_epitope_Rep1 1209.67173652289 1209.67062993586 63.676 2 -1.4523810222381894 0.4117619630471528 1.0 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'ENSG00000127564|ENST00000262300|PKMYT1', 'ENST00000575981.1_1_16:3022956-3024767:-|nuORF'] 140397 8034 YREWRRYYEVW True H1975_Epitope_Rep1 1704.8161093408 1704.8150099358602 35.846 2 -1.4524038462421516 0.4117619630471528 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 135954 19821 WQEWKQPRRDR True H1975_Epitope_Rep1 1583.8069416394296 1583.8058499358601 82.487 2 -1.452533813641754 0.41182435976640364 1.0 ['ENST00000430935.5_1_7:138875731-138875803:+|nuORF'] 123496 10049 VGPGLPGWGW True NCI_RA007_Epitope_Rep4 1024.5130510535198 1024.51194993586 45.499 2 -1.452583796021333 0.41182435976640364 1.0 ['ENST00000529076.1_1_11:102960023-102962823:-|nuORF'] 81029 10739 PINDIRIIA True NCI_RA007_Epitope_Rep3 1023.60767971435 1023.6065899358599 49.29 2 -1.452600151900833 0.41182435976640364 1.0 ['ENSG00000070915|ENST00000563236|SLC12A3', 'nc|ENSG00000070915|P55017-3|SLC12A3', 'nc|ENSG00000070915|P55017-2|SLC12A3'] 128890 12520 VQEYREAL True PC9_epitope_Rep4 1006.5083595958997 1006.50726993586 55.978 2 -1.4526133663229026 0.41182435976640364 1.0 ['ENSG00000044446|ENST00000379942|PHKA2', 'PHKA2|p.Q1025Pfs*38|1|0.65|ENSG00000044446|chrX:18899215-18899216|-/A|frameshift_variant'] 89799 23719 RALKQRQQQLH True PC9_epitope_Rep1 1404.80621336344 1404.80455490379 96.029 3 -1.4526719127454377 0.4118312157594125 1.0 ['ENSG00000185298|ENST00000329214|CCDC137'] 37928 11337 GYSPFLSITDG True PC9_epitope_Rep2 1155.54480467427 1155.54370993586 48.928 2 -1.4527148908732619 0.41186138406126516 1.0 ['ENST00000541346.1_1_12:6859683-6861527:-|nuORF', 'ENST00000536249.1_1_12:6861069-6861237:-|nuORF', 'ENSG00000089693|ENST00000203630|MLF2'] 110406 11322 TEVTDVYEM True PC9_epitope_Rep5 1085.4586920918098 1085.4575899358601 48.544 2 -1.4527810967443464 0.4118750947046962 1.0 ['ENST00000483009.1_1_1:32667515-32670212:+|nuORF', 'ENSG00000160050|ENST00000373602|CCDC28B', 'nc|ENSG00000160050|Q9BUN5-3|CCDC28B'] 61955 11878 LLDLPTVVP True H1975_Epitope_Rep1 965.57973363101 965.57862993586 50.688 2 -1.452809599312804 0.4118750947046962 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 84705 11390 QDLTRTQMEL True H1975_Epitope_Rep1 1233.6023366337301 1233.6012299358601 48.79 2 -1.4528239960732428 0.4118819497866984 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'ENST00000565339.5_1_16:67848301-67859829:+|nuORF', 'ENST00000487120.5_1_16:67848301-67859829:+|nuORF', 'ENST00000466164.5_1_16:67840937-67859829:+|nuORF'] 18241 13490 EIPEAPSKSLK True PC9_epitope_Rep2 1197.6605031328502 1197.6594099358601 57.175 2 -1.4529001635157086 0.4118860579500688 1.0 ['ENSG00000124203|ENST00000371030|ZNF831'] 61471 24914 LKAKKPQKRKP True H1975_Epitope_Rep3 1320.8717737421198 1320.8701349037901 103.64 3 -1.4529299383892058 0.4118860579500688 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 84430 12398 QAEIPLMRDRA True H1975_Epitope_Rep3 1298.6765046335 1298.6754099358602 52.878 2 -1.4529728719501962 0.4118860579500688 1.0 ['nc|ENSG00000156030|Q6PJG2|MIDEAS', 'ENSG00000156030|ENST00000423556|MIDEAS'] 44606 24094 ILQTLKRHEAA True PC9_epitope_Rep3 1278.7408191422203 1278.73918490379 97.962 3 -1.453036682073558 0.4118860579500688 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 119873 8226 VDFVLLGSS True NCI_RA007_Epitope_Rep2 935.4963979298699 935.49530993586 36.634 2 -1.453169882400719 0.41190456765230365 1.0 ['ENST00000296674.12_1_5:81573566-81574204:-|nuORF'] 35550 9578 GSVKPIYKKG True NCI_RA007_Epitope_Rep2 1075.6389798426299 1075.6378899358601 41.87 2 -1.453218220024746 0.41192307692307695 1.0 ['ENSG00000096080|ENST00000372133|MRPS18A', 'nc|ENSG00000096080|Q9NVS2-2|MRPS18A'] 133479 10467 VWDMPEHMDY True H1975_Epitope_Rep3 1321.51074474801 1321.5096499358601 45.323 2 -1.4535476198447097 0.4120039624730494 1.0 ['ENSG00000170734|ENST00000372236|POLH'] 69320 11811 LTVFPRLKY True PC9_epitope_Rep3 1135.67536535135 1135.67371490379 50.447 3 -1.4535844786398389 0.4120039624730494 1.0 ['ENST00000502245.1_1_4:36258154-36274888:+|nuORF'] 57390 9586 LEAPPERL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 42.216 2 -1.4535928351110352 0.4120039624730494 1.0 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 33094 13403 GIPISMSLLYL True PC9_epitope_Rep2 1205.67298239285 1205.67188993586 56.835 2 -1.4536568167321267 0.4120039624730494 1.0 ['FBXO21|p.K623Efs*6|1|0.11|ENSG00000135108|chr12:117146108-117146109|-/T|frameshift_variant', 'ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 121011 5520 VEQAPSEPLDP True H1975_Epitope_Rep3 1180.5611830143998 1180.56008993586 26.28 2 -1.4536579892849977 0.4120039624730494 1.0 ['ENSG00000183208|ENST00000329600|GDPGP1'] 60165 11474 LGNSIMVLLIY True NCI_RA007_Epitope_Rep1 1234.6995314938601 1234.69842993586 48.596 2 -1.4538033344920265 0.4120457776845442 1.0 ['OR2M7|p.M40L|1|0.1|ENSG00000177186|chr1:248324451-248324451|T/A|missense_variant'] 130457 16527 VSPASFENV True PC9_epitope_Rep2 948.45526139388 948.45471496793 68.811 1 -1.453862527450457 0.4120526297388325 1.0 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF'] 62258 19859 LLFKHMCY True PC9_epitope_Rep4 1053.51397965365 1053.5128899358601 84.518 2 -1.453900898322651 0.41206153129005946 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 59324 16761 LFIFRIMIL True NCI_RA007_Epitope_Rep5 1164.7093083319198 1164.7082099358602 71.233 2 -1.4539385028142444 0.41206153129005946 1.0 ['ENSG00000165474|ENST00000382848|GJB2'] 41903 8957 IDAQDRVLLLH True H1975_Epitope_Rep1 1291.72483472491 1291.72372993586 39.357 2 -1.4539601248575253 0.41206153129005946 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 119198 10884 VAKNESKLPP True PC9_epitope_Rep3 1081.6131590176099 1081.61206993586 46.845 2 -1.4539934334488913 0.41206838284136066 1.0 ['LRIT3|p.G458E|1|0.48|ENSG00000183423|chr4:109870122-109870122|G/A|missense_variant'] 91671 11611 RIVLLLDNP True H1975_Epitope_Rep2 1051.63897984263 1051.6378899358601 49.729 2 -1.4541797139387644 0.4121170452029413 1.0 ['KCNT2|p.P751R|1|0.17|ENSG00000162687|chr1:196326741-196326741|G/C|missense_variant'] 57025 21883 LDRRVVKGQV True PC9_epitope_Rep2 1168.7040397106798 1168.70294993586 89.649 2 -1.4541861040555355 0.4121170452029413 1.0 ['ENSG00000094916|ENST00000209875|CBX5'] 69002 15152 LTPRTPKV True PC9_epitope_Rep3 910.5600012459399 910.55890993586 63.423 2 -1.4543384892710876 0.41214720208823735 1.0 ['ENST00000511482.1_1_5:306832-313953:+|nuORF'] 121153 8192 VESALEVAHRL True H1975_Epitope_Rep3 1222.6669854956199 1222.6658899358602 36.49 2 -1.4543989576825262 0.41215129693071384 1.0 ['ENSG00000204366|ENST00000375527|ZBTB12'] 99469 12266 SICHNGGK True H1975_Epitope_Rep2 814.3755716045399 814.37502496793 52.264 1 -1.454411913994229 0.41215129693071384 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 10239 6736 CCCPCCGG True PC9_epitope_Rep4 744.15217989724 744.15162496793 33.101 1 -1.4544614511337692 0.41215129693071384 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 14519 10403 DTLRLWLI True PC9_epitope_Rep5 1028.6018660579198 1028.6007699358602 45.001 2 -1.4545384614241073 0.41215129693071384 1.0 ['ENST00000510089.5_1_5:87494777-87494978:-|nuORF', 'TMEM161B|p.L470Pfs*15|1|0.31|ENSG00000164180|chr5:88196266-88196266|A/-|frameshift_variant', 'ENSG00000164180|ENST00000296595|TMEM161B'] 91310 1663 RGRARRSKGK True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 8.8037 3 -1.4547792110564939 0.412228061385008 1.0 ['ENSG00000232399|ENST00000429667|USP17L13', 'ENSG00000223569|ENST00000456464|USP17L15', 'ENSG00000233136|ENST00000457736|USP17L11', 'ENSG00000250844|ENST00000504209|USP17L18', 'ENSG00000250745|ENST00000506151|USP17L20', 'ENSG00000249811|ENST00000506414|USP17L21', 'ENSG00000249104|ENST00000511568|USP17L17', 'ENSG00000248920|ENST00000515566|USP17L19', 'ENSG00000235780|ENST00000515574|USP17L27', 'ENSG00000248933|ENST00000511280|USP17L22', 'ENSG00000232264|ENST00000504481|USP17L24', 'ENSG00000231637|ENST00000511681|USP17L29', 'ENSG00000231051|ENST00000504543|USP17L28', 'ENSG00000230430|ENST00000509271|USP17L25', 'ENSG00000229579|ENST00000509660|USP17L26', 'ENSG00000228856|ENST00000504104|USP17L30', 'ENSG00000227551|ENST00000415041|USP17L12', 'ENSG00000227140|ENST00000507227|USP17L5'] 122756 10124 VGGLPPGLSPE True NCI_RA007_Epitope_Rep4 1021.54441075145 1021.54330993586 45.797 2 -1.4548284345229 0.4122349102773246 1.0 ['ENSG00000145214|ENST00000273814|DGKQ'] 124324 20232 VGTQSAGK True PC9_epitope_Rep6 746.3922672145 746.39171496793 90.505 1 -1.4549517901430822 0.4122883676489437 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 82799 9645 PRRDYATAVP True PC9_epitope_Rep1 1144.5989059357998 1144.5978099358601 41.955 2 -1.4550169419965384 0.41231371543758666 1.0 ['ENSG00000116819|ENST00000373235|TFAP2E'] 29106 6912 FTKTSQKFGQW True PC9_epitope_Rep2 1356.6826355597598 1356.68152993586 31.989 2 -1.4550274954430142 0.41231371543758666 1.0 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3', 'nc|ENSG00000152413|Q86YM7-3|HOMER1', 'nc|ENSG00000051128|Q9NSC5-5|HOMER3', 'ENSG00000103942|ENST00000450735|HOMER2', 'nc|ENSG00000103942|Q9NSB8|HOMER2', 'ENSG00000152413|ENST00000334082|HOMER1', 'nc|ENSG00000152413|Q86YM7-2|HOMER1'] 68835 10656 LTLVLGGR True NCI_RA007_Epitope_Rep2 827.5228874612299 827.5217899358599 46.049 2 -1.455075208696896 0.4123246492985972 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D'] 19160 8858 ELHLCHCPA True PC9_epitope_Rep1 1021.4473566458099 1021.44624993586 38.913 2 -1.4552238626982559 0.4123246492985972 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 3362 16333 AGGVGLGK True NCI_RA007_Epitope_Rep1 657.38097425481 657.38042496793 67.643 1 -1.4552408820129714 0.4123246492985972 1.0 ['ENST00000305103.3_1_8:146076746-146078390:-|nuORF', 'ENST00000543949.2_1_8:146078222-146078447:-|nuORF'] 37179 10861 GVQREEVP True PC9_epitope_Rep3 912.4664947839199 912.46538993586 46.753 2 -1.4553370025885852 0.4123246492985972 1.0 ['CON__Q2UVX4'] 142212 4490 YWAMTALYL True PC9_epitope_Rep2 1130.5470536037399 1130.54539490379 22.628 3 -1.4553538535669648 0.4123246492985972 1.0 ['nc|ENSG00000204385|Q53GD3-3|SLC44A4', 'nc|ENSG00000204385|Q53GD3-4|SLC44A4', 'ENSG00000204385|ENST00000229729|SLC44A4', 'SLC44A4|p.T381A|1|0.22|ENSG00000204385|chr6:31869247-31869247|T/C|missense_variant'] 36254 3476 GVDRYAVSIMW True NCI_RA007_Epitope_Rep5 1295.6332428391897 1295.63158490379 19.161 3 -1.455462587241174 0.41234314742103484 1.0 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 85643 4623 QGLPSDQAT True PC9_epitope_Rep3 915.42977492203 915.42866993586 22.877 2 -1.4556037840877016 0.41236164511243156 1.0 ['ENST00000598240.1_1_19:19105804-19136912:-|nuORF'] 133226 6424 VVSQPPDT True PC9_epitope_Rep3 841.41814760917 841.4175949679301 29.737 1 -1.455732299444024 0.4124267455814333 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 37370 14250 GVSKKGGS True NCI_RA007_Epitope_Rep4 718.3973525949399 718.39680496793 62.095 1 -1.4559971112154138 0.41244451693325723 1.0 ['ENST00000240185.7_1_1:11083899-11083992:+|nuORF'] 25950 6716 FFVVFICEYI True H1975_Epitope_Rep3 1278.6358686081398 1278.63476993586 30.789 2 -1.4560313731060022 0.41244451693325723 1.0 ['nc|ENSG00000054611|Q8WUA7-3|TBC1D22A', 'nc|ENSG00000054611|Q8WUA7-4|TBC1D22A', 'ENSG00000054611|ENST00000337137|TBC1D22A', 'nc|ENSG00000054611|Q8WUA7-2|TBC1D22A'] 94424 20495 RRRRQFTVRLN True H1975_Epitope_Rep2 1500.88619501964 1500.88453490379 84.914 3 -1.4560704406840932 0.41244451693325723 1.0 ['ENSG00000274180|ENST00000611551|NATD1'] 81469 17081 PLGAVRRS True NCI_RA007_Epitope_Rep5 854.50863437942 854.50752993586 72.47 2 -1.456087902864918 0.41244451693325723 1.0 ['ENST00000379982.7_1_5:95067096-95067162:+|nuORF'] 9332 6438 AVRCLPKC True PC9_epitope_Rep1 888.4673638143998 888.4668149679301 29.571 1 -1.4561273750124168 0.41244451693325723 1.0 ['SLFN5|p.E282Kfs*34|1|0.15|ENSG00000166750|chr17:35259530-35259530|C/-|frameshift_variant'] 18086 10824 EIHQEYKEL True NCI_RA007_Epitope_Rep3 1187.5822528121498 1187.5811499358601 49.626 2 -1.4561607634091638 0.41244451693325723 1.0 ['ENSG00000163001|ENST00000349456|CFAP36', 'nc|ENSG00000163001|Q96G28-2|CFAP36'] 66415 14262 LSGLPDTVFEI True PC9_epitope_Rep3 1189.6230549949698 1189.6219499358601 59.943 2 -1.4561693319529565 0.41244655692633886 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 39441 18477 HKWRMQRPL True NCI_RA007_Epitope_Rep3 1250.6818647974599 1250.68076993586 80.856 2 -1.4562034375626491 0.41244655692633886 1.0 ['ENST00000381348.4_2_22:42353689-42353893:+|nuORF', 'ENSG00000205704|ENST00000381348|SMIM45'] 61365 17144 LISWYDNEF True PC9_epitope_Rep5 1185.53423999057 1185.5331499358601 70.965 2 -1.4563949278375927 0.4124992719436193 1.0 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 79818 4341 PEFKMQWPE True NCI_RA007_Epitope_Rep4 1190.5430308524599 1190.54192993586 23.041 2 -1.456415870787299 0.4124992719436193 1.0 ['ENST00000487694.7_2_3:75956101-75986702:+|nuORF'] 102311 8803 SLSQKQDPK True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 38.812 2 -1.4564356659425048 0.4124992719436193 1.0 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant'] 21778 9030 ERVPKIAP True NCI_RA007_Epitope_Rep3 908.5443511817999 908.54324993586 42.615 2 -1.4565643767068703 0.4124992719436193 1.0 ['ENSG00000132842|ENST00000255194|AP3B1', 'nc|ENSG00000132842|O00203-3|AP3B1', 'AP3B1|p.L559Gfs*12|1|0.13|ENSG00000132842|chr5:78129284-78129285|-/GTCTAGCATAGTATGAAGAAATCCCGTTTCCA|frameshift_variant'] 116960 8349 TVGGRCCH True H1975_Epitope_Rep2 831.34797695771 831.34686993586 37.067 2 -1.4565792828354789 0.4124992719436193 1.0 ['ENST00000435835.3_1_16:67405078-67412613:+|nuORF'] 61475 27063 LKAKKPQKRKP True PC9_epitope_Rep3 1320.8717737421198 1320.8701349037901 111.34 3 -1.4565813234656488 0.4124992719436193 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 76654 12738 NQSDQLPGWSP True H1975_Epitope_Rep2 1227.5520153130299 1227.5514749679298 54.099 1 -1.4567108925029661 0.412529413135149 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 94667 16659 RRWWWLQRRQA True H1975_Epitope_Rep3 1640.89128040008 1640.89018993586 69.595 2 -1.4567506860845938 0.4125362563630645 1.0 ['ENST00000591247.5_1_17:42113394-42113565:-|nuORF'] 33949 5803 GLSEEQRQL True NCI_RA007_Epitope_Rep4 1058.5356369729 1058.53452993586 28.946 2 -1.4567583933159494 0.41255401674956027 1.0 ['ENSG00000128928|ENST00000487418|IVD', 'nc|ENSG00000128928|P26440|IVD'] 78861 8967 PAEPDPDFDP True H1975_Epitope_Rep2 1098.4505699362599 1098.4494699358602 39.445 2 -1.4567870803760685 0.41255401674956027 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 55724 13059 LALLWVAA True PC9_epitope_Rep3 855.5218248320699 855.52072993586 55.258 2 -1.4568733288292606 0.41255401674956027 1.0 ['ADRA1D|p.V223A|1|0.12|ENSG00000171873|chr20:4248290-4248290|A/G|missense_variant'] 85596 11048 QGGYGHPG True NCI_RA007_Epitope_Rep3 771.33000131111 771.32890993586 50.557 2 -1.4568753912918142 0.41255401674956027 1.0 ['ENST00000506481.1_1_4:125356953-125357223:-|nuORF'] 37241 22137 GVRIKRTS True PC9_epitope_Rep3 915.5613982282699 915.56084496793 90.44 1 -1.4568764029526995 0.41255401674956027 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 127937 21955 VPGWKLCP True PC9_epitope_Rep5 898.4734947406598 898.47238993586 89.485 2 -1.456880548487902 0.41255401674956027 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 32988 8121 GIFQLWNCPLN True NCI_RA007_Epitope_Rep5 1303.6383282196298 1303.6372299358602 37.924 2 -1.4569785082013524 0.41257250681389335 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 43745 15304 IHHARVLIR True PC9_epitope_Rep6 1113.6883300768898 1113.6872299358602 70.986 2 -1.457330684700958 0.41264923417389787 1.0 ['ENSG00000170889|ENST00000302907|RPS9'] 138117 7272 YGHTLTPE True NCI_RA007_Epitope_Rep4 916.42904664604 916.4284949679301 34.607 1 -1.457425149034086 0.41266772269847185 1.0 ['ENSG00000142102|ENST00000409548|PGGHG', 'nc|ENSG00000142102|Q32M88-2|PGGHG', 'ENST00000474221.5_1_11:289135-291269:+|nuORF'] 31230 6674 GDAIHKRNQSH True NCI_RA007_Epitope_Rep1 1261.62758029513 1261.62648993586 29.971 2 -1.45747801771624 0.4126690192515985 1.0 ['ENSG00000173611|ENST00000336505|SCAI', 'nc|ENSG00000173611|Q8N9R8-2|SCAI'] 27062 20170 FLFLVMHKI True NCI_RA007_Epitope_Rep4 1146.6623581395 1146.6612699358602 87.277 2 -1.4574967254213975 0.4126690192515985 1.0 ['SERPINB2|p.I398V|1|0.28|ENSG00000197632|chr18:63903249-63903249|A/G|missense_variant'] 82937 14954 PSDNPHVL True PC9_epitope_Rep4 877.42938099921 877.42828993586 65.46 2 -1.457563526432478 0.4126690192515985 1.0 ['ENSG00000145623|ENST00000274276|OSMR'] 79816 26359 PEFDEEVVFEN True H1975_Epitope_Rep3 1352.5772270013597 1352.57612993586 109.94 2 -1.457587200883737 0.4126690192515985 1.0 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000546398.5_1_12:95611596-95687545:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-5|VEZT', 'nc|ENSG00000028203|Q9HBM0-6|VEZT'] 101342 11194 SLISKHGTL True PC9_epitope_Rep4 954.5498304850599 954.54872993586 50.836 2 -1.4576350693361981 0.4126690192515985 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 121250 13887 VETFGDLAFG True H1975_Epitope_Rep1 1054.4971262058598 1054.49657496793 58.566 1 -1.4576433450121455 0.4126690192515985 1.0 ['nc|ENSG00000188986|Q8WX92|NELFB', 'ENSG00000188986|ENST00000343053|NELFB'] 43146 14003 IFDRELHRQTG True NCI_RA007_Epitope_Rep4 1370.7054962626598 1370.70438993586 61.135 2 -1.4576627324149953 0.4126690192515985 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 14779 8688 DVNVYLGLTS True H1975_Epitope_Rep1 1079.5498900547097 1079.5487899358602 38.349 2 -1.457774147847486 0.4126710533977756 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'TEX14|p.D842Gfs*23|1|0.06|ENSG00000121101|chr17:58593623-58593624|AT/-|frameshift_variant', 'ENSG00000121101|ENST00000349033|TEX14'] 12768 10576 DLEMEMLKHL True H1975_Epitope_Rep3 1257.6097305132898 1257.60862993586 45.749 2 -1.457775848630993 0.4126710533977756 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 81066 23518 PIRKIYIE True PC9_epitope_Rep2 1030.6175161220597 1030.61640993586 95.935 2 -1.4579441081391409 0.4127128316213635 1.0 ['ENSG00000108932|ENST00000580666|SLC16A6'] 118587 20592 TYRCIKQVH True NCI_RA007_Epitope_Rep3 1146.5967977608198 1146.59515490379 89.693 3 -1.4580101098057527 0.41271967111928914 1.0 ['ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3'] 14889 14403 DWVPRYTGV True PC9_epitope_Rep6 1091.53999407735 1091.5388899358602 67.299 2 -1.458110329564932 0.4127305757406372 1.0 ['nc|ENSG00000158859|O75173-2|ADAMTS4', 'ENSG00000158859|ENST00000367996|ADAMTS4', 'ADAMTS4|p.P615L|1|0.28|ENSG00000158859|chr1:161193280-161193280|G/A|missense_variant'] 60033 21379 LGKQHREK True H1975_Epitope_Rep3 994.5672118846999 994.56610993586 89.332 2 -1.4581813689019099 0.4127305757406372 1.0 ['ENSG00000198783|ENST00000361952|ZNF830'] 88372 7635 QSLDDAAKT True H1975_Epitope_Rep2 947.45598966987 947.45488993586 34.32 2 -1.4582248366553938 0.4127305757406372 1.0 ['ENSG00000096696|ENST00000379802|DSP'] 84664 4529 QDIEYIEIR True NCI_RA007_Epitope_Rep2 1177.5979028762897 1177.5968099358602 22.246 2 -1.4582328774270785 0.4127305757406372 1.0 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 123199 3867 VGLDNDLR True NCI_RA007_Epitope_Rep4 900.46649478392 900.46538993586 21.079 2 -1.4582545840964496 0.4127305757406372 1.0 ['nc|ENSG00000170456|Q6ZUT9-4|DENND5B', 'ENSG00000170456|ENST00000389082|DENND5B', 'nc|ENSG00000170456|Q6ZUT9-2|DENND5B'] 82560 21356 PPTSHFHVL True PC9_epitope_Rep3 1033.5345147740898 1033.5334099358602 87.443 2 -1.458302891476759 0.4127510917030568 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2', 'ENST00000549209.5_1_12:56565201-56568439:-|nuORF', 'ENST00000552931.1_1_12:56566100-56568508:-|nuORF'] 26390 1951 FHWKMNLCVI True NCI_RA007_Epitope_Rep2 1289.64130542509 1289.6396549037902 10.634 3 -1.4583737217923483 0.4127510917030568 1.0 ['ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A', 'nc|ENSG00000188092|B7ZAQ6-4|GPR89A', 'ENST00000532574.5_1_1:145811866-145826998:-|nuORF'] 19646 10050 ELRAFLRHYEA True H1975_Epitope_Rep3 1403.73098273451 1403.72988993586 43.693 2 -1.4583950377773123 0.4127510917030568 1.0 ['ENSG00000184261|ENST00000327876|KCNK12'] 26851 14368 FLDDRHRWQRL True H1975_Epitope_Rep1 1540.801127983 1540.80002993586 60.459 2 -1.4584628410462581 0.41278805733782037 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 82631 6651 PQKPQAQKRG True NCI_RA007_Epitope_Rep1 1136.6414394541196 1136.64034993586 29.883 2 -1.458464893015177 0.41278805733782037 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 43391 9134 IGDSRISL True PC9_epitope_Rep4 859.4763311916299 859.4752299358599 42.725 2 -1.4584861558009579 0.4127948950837234 1.0 ['nc|ENSG00000144395|Q8NCX0-2|CCDC150'] 2031 19473 AEKLKELQNEV True PC9_epitope_Rep6 1299.7034305739899 1299.70232993586 87.566 2 -1.458578786586348 0.41282502125082965 1.0 ['nc|ENSG00000258643|Q92843-2|BCL2L2', 'ENSG00000258643|ENST00000678502|BCL2L2-PABPN1', 'ENST00000556809.1_1_14:23791392-23792332:+|nuORF', 'nc|ENSG00000100836|Q86U42-2|PABPN1', 'ENSG00000100836|ENST00000216727|PABPN1'] 127716 14779 VPAPPFSLGKL True PC9_epitope_Rep4 1124.65938093404 1124.65828993586 64.778 2 -1.4586146092742605 0.41284350256171404 1.0 ['ENST00000456754.6_1_X:47444724-47445414:+|nuORF'] 40347 22682 HQRFESRMS True NCI_RA007_Epitope_Rep3 1176.54582481712 1176.54418490379 98.611 3 -1.4586580001289575 0.4128503394231553 1.0 ['MYO1B|p.H488R|1|0.18|ENSG00000128641|chr2:191385993-191385993|A/G|missense_variant'] 69587 5470 LVDLPPSFY True H1975_Epitope_Rep1 1049.54334812229 1049.5422499358601 26.101 2 -1.4586922495791605 0.41285717612538136 1.0 ['L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|343|3|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|330|3|anti-sense', 'chr1:245814415-245816795|243|17.47|0.01|10.93|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|60', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|60'] 71414 16518 LYTAQGRTL True PC9_epitope_Rep3 1021.5556441414899 1021.55454993586 68.672 2 -1.4587928391315412 0.41286401266839773 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 99975 24312 SIPELAHS True H1975_Epitope_Rep1 852.43413202648 852.43302993586 100.82 2 -1.458864720541437 0.4128857997741376 1.0 ['nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.S2884A|1|0.2|ENSG00000127914|chr7:92084643-92084643|T/G|missense_variant'] 79453 20244 PAVLGITF True PC9_epitope_Rep5 816.4745402864801 816.47344993586 82.917 2 -1.4588764007548138 0.4128857997741376 1.0 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 82675 18633 PQQLWLVL True NCI_RA007_Epitope_Rep3 995.5804023373499 995.57930993586 81.526 2 -1.4590216897203117 0.4128857997741376 1.0 ['ENSG00000278619|ENST00000614766|MRM1'] 18766 11318 ELCTNNNLK True PC9_epitope_Rep3 1047.50189431647 1047.5007899358602 48.542 2 -1.4590220728581762 0.4128857997741376 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 27688 23286 FPKERPQR True H1975_Epitope_Rep1 1056.5828619488398 1056.5817699358602 96.793 2 -1.4590960152959143 0.4128857997741376 1.0 ['nc|ENSG00000168405|Q9Y471|CMAHP', 'nc|ENSG00000168405|Q9Y471-4|CMAHP', 'ENST00000490939.1_1_6:25087010-25108891:-|nuORF'] 31162 10697 GAWIPFQVP True PC9_epitope_Rep4 1013.5334521449298 1013.53234993586 48.898 2 -1.4591370128850392 0.4128857997741376 1.0 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136'] 575 6908 AARALVNL True PC9_epitope_Rep4 826.50248636982 826.5019349679301 33.795 1 -1.4591458927917622 0.4128857997741376 1.0 ['ENST00000530074.1_1_8:145192726-145193642:+|nuORF', 'ENSG00000235173|ENST00000347708|HGH1'] 91289 19701 RGPGRTIRF True NCI_RA007_Epitope_Rep4 1058.6097454030198 1058.60864993586 85.139 2 -1.4591577992000977 0.4128857997741376 1.0 ['ENSG00000137103|ENST00000643932|TMEM8B'] 110573 13973 TFRFRKYREHH True NCI_RA007_Epitope_Rep1 1575.81711240031 1575.8160099358602 58.377 2 -1.4591633355874958 0.4128857997741376 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|28|2|sense'] 15151 7521 EAAERSRAEAL True NCI_RA007_Epitope_Rep2 1201.6051135150499 1201.6040099358602 33.881 2 -1.4591687648654152 0.4128857997741376 1.0 ['ENSG00000105617|ENST00000222224|LENG1'] 117545 6430 TVSEVSSRGP True PC9_epitope_Rep2 1017.50908787189 1017.50798993586 30.142 2 -1.4592981822640037 0.41290833313930475 1.0 ['ENST00000518198.1_1_8:142138729-142146690:+|nuORF'] 68475 10699 LTFLNRGE True PC9_epitope_Rep1 948.5028802926399 948.50178993586 46.044 2 -1.4593035631392555 0.41290833313930475 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 3567 6203 AGLVWWFHR True NCI_RA007_Epitope_Rep4 1170.60868277386 1170.60758993586 30.469 2 -1.4593346863741317 0.41290833313930475 1.0 ['ENST00000261951.8_1_5:179921647-179956302:+|nuORF', 'ENST00000393356.5_1_5:179921647-179922490:+|nuORF'] 43516 7467 IGNAAAVGQAA True PC9_epitope_Rep3 941.4930438849299 941.49194993586 33.726 2 -1.4594114407527308 0.41290833313930475 1.0 ['ENSG00000138061|ENST00000610745|CYP1B1', 'CYP1B1|p.L240Pfs*87|1|0.43|ENSG00000138061|chr2:38074670-38074671|-/G|frameshift_variant'] 74068 10236 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 44.379 1 -1.4594222859078554 0.41290833313930475 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 133229 8983 VVSRGERWR True NCI_RA007_Epitope_Rep2 1143.62612374315 1143.62502993586 39.552 2 -1.4594497506484883 0.4129151678133622 1.0 ['ENST00000376687.3_1_X:48555050-48555188:+|nuORF'] 85286 15278 QEQQLEFGA True H1975_Epitope_Rep2 1048.4825387708797 1048.4814499358602 63.925 2 -1.4596573846975496 0.4129452852153667 1.0 ['ENSG00000138035|ENST00000447944|PNPT1', 'ENST00000450418.1_1_3:4023868-4024087:-|nuORF'] 30993 11706 GASGGGGD True NCI_RA007_Epitope_Rep5 576.21396849936 576.2134249679301 51.68 1 -1.4598022571564868 0.41302196714822875 1.0 ['ENST00000521689.5_1_8:98881135-98900426:+|nuORF'] 867 11728 ADGGGGGS True H1975_Epitope_Rep3 576.21396849936 576.2134249679301 50.252 1 -1.4598608743433263 0.41305208260576004 1.0 ['ENSG00000228075|ENST00000585477|BOD1L2'] 105765 7610 SSGLVRGSH True PC9_epitope_Rep1 898.4620781098199 898.46098993586 34.092 2 -1.4599810915448554 0.41305815523583367 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1'] 28333 23837 FRRYLSVFF True PC9_epitope_Rep4 1233.66586329681 1233.66421490379 100.11 3 -1.4600004625772527 0.41305815523583367 1.0 ['ENSG00000121807|ENST00000445132|CCR2'] 48472 23209 KAERKKHSLK True PC9_epitope_Rep3 1223.7462388758297 1223.7451499358601 94.548 2 -1.4600338996225506 0.41305815523583367 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 120140 11997 VEAIREALVDK True NCI_RA007_Epitope_Rep4 1241.69795127073 1241.6968499358602 53.151 2 -1.460035344754373 0.41305815523583367 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 66414 14172 LSGLPDTVFEI True PC9_epitope_Rep3 1189.6230549949698 1189.6219499358601 59.597 2 -1.460038050421259 0.41305815523583367 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 62728 18733 LLLPFHKYF True NCI_RA007_Epitope_Rep3 1176.66955169492 1176.66844993586 81.917 2 -1.460039623304092 0.41305815523583367 1.0 ['ENST00000367688.3_1_1:174933997-174934066:+|nuORF'] 120700 2621 VEKFDLVP True NCI_RA007_Epitope_Rep3 945.5171333744498 945.51602993586 14.771 2 -1.4600778749046766 0.41308826781827285 1.0 ['GSN|p.G438Rfs*48|1|0.15|ENSG00000148180|chr9:121318844-121318863|GCACGGCATGGATGACGATG/-|frameshift_variant', 'ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 137715 6144 YELLVGYP True H1975_Epitope_Rep3 952.4905842734399 952.48948993586 28.643 2 -1.4602540571082596 0.41309509952275636 1.0 ['nc|ENSG00000105146|Q9UQB9-2|AURKC', 'nc|ENSG00000105146|Q9UQB9-3|AURKC', 'ENSG00000105146|ENST00000302804|AURKC'] 123550 13441 VGPPVWPREE True PC9_epitope_Rep4 1164.5927579262 1164.59110490379 59.6 3 -1.4605087245020545 0.413166961542043 1.0 ['ENST00000232854.8_1_3:50606980-50608690:+|nuORF', 'ENST00000424388.1_1_3:50607184-50608690:+|nuORF', 'ENST00000482974.1_1_3:50608300-50608690:+|nuORF'] 112992 8308 TLLTLHFPRL True NCI_RA007_Epitope_Rep1 1209.7233781729299 1209.7217249037901 36.317 3 -1.4605242010453878 0.413166961542043 1.0 ['ENSG00000175595|ENST00000311895|ERCC4'] 86603 17699 QLEHQKRSAGR True PC9_epitope_Rep1 1308.7010795885599 1308.69998993586 72.874 2 -1.4605922848241402 0.4131970714560078 1.0 ['ENST00000471681.5_1_3:56606414-56647710:+|nuORF'] 118831 23002 VAALLLFLVL True PC9_epitope_Rep4 1070.71035387774 1070.70977496793 96.697 1 -1.4606672898042785 0.4132039015759946 1.0 ['IFNGR1|p.E444Sfs*3|1|0.88|ENSG00000027697|chr6:137198172-137198172|T/-|frameshift_variant', 'ENSG00000027697|ENST00000367739|IFNGR1'] 83894 7518 PVPSFSGK True PC9_epitope_Rep6 817.4334037504899 817.43230993586 38.176 2 -1.4607538766109476 0.4132456497701216 1.0 ['ENST00000540589.2_1_12:113357371-113369720:+|nuORF'] 76605 9061 NQNISLLQAEN True NCI_RA007_Epitope_Rep2 1242.6204292260197 1242.6193299358602 39.848 2 -1.4607898804724153 0.41325247916569674 1.0 ['ENST00000449849.2_1_2:203790299-203790389:+|nuORF'] 26974 6481 FLEEATEA True PC9_epitope_Rep5 908.4127278755599 908.41162993586 29.901 2 -1.4608294268246433 0.4132544984752904 1.0 ['ENST00000505030.5_1_5:87961954-87962140:-|nuORF'] 122980 2717 VGHVVRFG True PC9_epitope_Rep1 869.4871706588499 869.48606993586 14.868 2 -1.4609043693749764 0.4132544984752904 1.0 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 139626 5050 YMDGRLIYSGS True NCI_RA007_Epitope_Rep4 1260.58087291316 1260.5797699358602 25.922 2 -1.4610420128095183 0.4132582413106971 1.0 ['USH2A|p.L4549*|1|0.18|ENSG00000042781|chr1:215674265-215674265|A/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.T3105Lfs*55|1|0.1|ENSG00000042781|chr1:215838050-215838050|G/-|frameshift_variant', 'USH2A|p.P2747Hfs*22|1|0.12|ENSG00000042781|chr1:215879082-215879082|G/-|frameshift_variant', 'USH2A|p.A2249Pfs*30|1|0.12|ENSG00000042781|chr1:215993084-215993084|G/-|frameshift_variant'] 28723 14759 FSRYWRRWNRF True PC9_epitope_Rep1 1672.8487468817596 1672.84764993586 61.589 2 -1.4610967597853568 0.4132582413106971 1.0 ['nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-2|CACNA1C'] 139221 20063 YLFKRFIF True PC9_epitope_Rep6 1132.64333694708 1132.64222993586 89.839 2 -1.4612016591694406 0.4132582413106971 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 94680 19554 RRYKLQKQ True NCI_RA007_Epitope_Rep2 1118.6672602791398 1118.6661699358601 81.001 2 -1.4612202455345595 0.4132582413106971 1.0 ['ENST00000473916.1_1_6:30891971-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-2|VARS2', 'ENST00000469358.5_1_6:30889720-30893984:+|nuORF', 'ENST00000477288.5_1_6:30884740-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-3|VARS2', 'ENSG00000137411|ENST00000676266|VARS2', 'nc|ENSG00000137411|Q5ST30-4|VARS2'] 52811 21328 KPAATWPP True NCI_RA007_Epitope_Rep4 866.46503823194 866.46394993586 92.452 2 -1.4612435021073666 0.4132582413106971 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 121633 13015 VFHPVMFDKC True PC9_epitope_Rep2 1221.56747177849 1221.5663699358602 55.346 2 -1.461275127660729 0.4132582413106971 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.T675Nfs*2|1|0.06|ENSG00000151503|chr11:134192695-134192710|TCCTGGCTTTCGGTGG/-|frameshift_variant'] 28724 14652 FSRYWRRWNRF True PC9_epitope_Rep5 1672.8487468817596 1672.84764993586 61.362 2 -1.4613801576426244 0.4132582413106971 1.0 ['nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-2|CACNA1C'] 3860 7650 AGWGGHPA True H1975_Epitope_Rep3 751.34017207199 751.33906993586 34.407 2 -1.4613849655082942 0.4132582413106971 1.0 ['ENSG00000142235|ENST00000600059|LMTK3'] 54641 10753 KYLHEKNQRQ True PC9_epitope_Rep5 1342.7105816430999 1342.7089349037901 46.354 3 -1.4614288260514023 0.4132582413106971 1.0 ['nc|ENSG00000284701|A6NEH6|TMEM247'] 61447 21270 LIWVWKKWMRA True H1975_Epitope_Rep1 1515.85368114983 1515.8525899358601 88.363 2 -1.46143703561143 0.4132582413106971 1.0 ['ENST00000360700.4_2_X:84502094-84502157:+|nuORF'] 112921 12971 TLLGALGG True H1975_Epitope_Rep3 700.41194002992 700.41139496793 55.126 1 -1.461465399740429 0.4132582413106971 1.0 ['ENST00000359451.6_1_6:110481915-110500819:-|nuORF', 'ENST00000392587.6_1_6:110448797-110500819:-|nuORF', 'ENST00000392588.5_1_6:110499922-110500924:-|nuORF'] 112125 8298 TIWVNCHVS True PC9_epitope_Rep5 1057.5015003936498 1057.50040993586 36.857 2 -1.4614720448744996 0.4132582413106971 1.0 ['ENSG00000255009|ENST00000530464|UBTFL1'] 123989 17639 VGSDPVLM True NCI_RA007_Epitope_Rep5 816.40514039732 816.40459496793 74.632 1 -1.4615535075490558 0.4132582413106971 1.0 ['nc|ENSG00000114423|Q13191-3|CBLB', 'nc|ENSG00000114423|Q13191-2|CBLB', 'ENSG00000114423|ENST00000394030|CBLB'] 132285 5067 VTWHVPIDCIL True NCI_RA007_Epitope_Rep1 1294.6743793751798 1294.6727249037901 23.794 3 -1.4616457815608612 0.4132582413106971 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 16543 8177 EELQSGVDAA True H1975_Epitope_Rep2 1017.4614689731297 1017.4608749679301 36.403 1 -1.4616705913940686 0.4132582413106971 1.0 ['ENSG00000140575|ENST00000268182|IQGAP1'] 119827 7276 VDATHIGKL True H1975_Epitope_Rep3 952.5341804209198 952.53308993586 32.962 2 -1.4616960287648306 0.4132582413106971 1.0 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant'] 65104 7462 LQLYKLLEIPD True NCI_RA007_Epitope_Rep2 1343.7700535818299 1343.76894993586 33.652 2 -1.4617221893202317 0.4132582413106971 1.0 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 120558 6801 VEGILEHTL True NCI_RA007_Epitope_Rep4 1009.5444107514501 1009.54330993586 32.785 2 -1.4617757883681122 0.4132582413106971 1.0 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF'] 38652 18547 HFPDFDKKI True PC9_epitope_Rep1 1145.58694426977 1145.58529490379 76.131 3 -1.4617766142989583 0.4132582413106971 1.0 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 137995 10475 YFRIRFYFRNW True H1975_Epitope_Rep1 1666.8521009266997 1666.85100993586 45.247 2 -1.4617890270430935 0.4132582413106971 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 114142 22184 TPILKNRHEK True PC9_epitope_Rep6 1234.7146043943796 1234.71295490379 98.278 3 -1.4617915951093865 0.4132582413106971 1.0 ['ENSG00000115524|ENST00000335508|SF3B1', 'ENST00000496458.1_1_2:198262707-198263303:-|nuORF'] 93555 10871 RQLLSSYQFYW True NCI_RA007_Epitope_Rep1 1489.73539940861 1489.73374490379 46.276 3 -1.4619364137162902 0.41327189583551505 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 24633 7530 FAIYGGVSG True PC9_epitope_Rep6 869.4283183700499 869.4272299358599 38.225 2 -1.4619579937654947 0.41327189583551505 1.0 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 18511 4743 EKHFQREEQER True H1975_Epitope_Rep3 1514.7226028787798 1514.72150993586 23.37 2 -1.4620642068845802 0.4133252658769868 1.0 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7', 'nc|ENSG00000135525|Q14244-5|MAP7', 'nc|ENSG00000135525|Q14244-3|MAP7'] 97312 7325 SEALRSVLAQ True H1975_Epitope_Rep3 1072.58767254576 1072.58656993586 33.15 2 -1.462118823384295 0.4133457443714003 1.0 ['DHDH|p.Y287Lfs*2|1|0.2|ENSG00000104808|chr19:48944469-48944470|-/T|frameshift_variant', 'ENSG00000104808|ENST00000221403|DHDH'] 66434 8384 LSGPLSVTGV True PC9_epitope_Rep2 928.52294703088 928.52184993586 37.621 2 -1.4621357921165241 0.4133457443714003 1.0 ['ENST00000477438.1_1_22:44564113-44564555:+|nuORF'] 39502 5632 HLEETTQK True H1975_Epitope_Rep2 984.4876241513199 984.48652993586 26.663 2 -1.4622056559450152 0.4133457443714003 1.0 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.R1136Cfs*2|1|0.11|ENSG00000047410|chr1:186344390-186344393|TCTT/-|frameshift_variant'] 23818 7335 EYIIRTLSRVE True NCI_RA007_Epitope_Rep4 1377.7616141564502 1377.76050993586 34.852 2 -1.4622524621716486 0.4133710309842112 1.0 ['ENSG00000196376|ENST00000360388|SLC35F1', 'nc|ENSG00000196376|Q5T1Q4-2|SLC35F1'] 134067 9421 VYKIMCVILV True PC9_epitope_Rep6 1179.67595959831 1179.67432490379 46.461 3 -1.4622757606314916 0.4133710309842112 1.0 ['ENST00000409892.5_1_2:65315130-65315409:-|nuORF'] 23535 9416 EVVSPVLSSR True NCI_RA007_Epitope_Rep5 1071.59242357303 1071.5913299358601 42.857 2 -1.4623733012590496 0.41343122084026573 1.0 ['ENST00000496336.1_1_7:65540843-65547929:+|nuORF'] 5161 8913 ALLSGVLTLK True NCI_RA007_Epitope_Rep2 1013.64848189717 1013.64738993586 39.294 2 -1.4624504839001233 0.41343122084026573 1.0 ['ENST00000460159.1_1_6:110746078-110746521:-|nuORF', 'nc|ENSG00000004809|Q86VW1-2|SLC22A16', 'ENSG00000004809|ENST00000368919|SLC22A16'] 59511 23106 LFRPRNGR True PC9_epitope_Rep4 1014.5835306551799 1014.58242993586 97.096 2 -1.4625030881284409 0.41343804537521817 1.0 ['ENSG00000109255|ENST00000264218|NMU', 'NMS|p.N144S|1|0.15|ENSG00000204640|chr2:100482293-100482293|A/G|missense_variant', 'NMS|p.F135C|1|0.23|ENSG00000204640|chr2:100481157-100481157|T/G|missense_variant', 'ENST00000515325.5_1_4:56465315-56502750:-|nuORF', 'ENSG00000204640|ENST00000376865|NMS'] 57617 8497 LEEDHRIF True NCI_RA007_Epitope_Rep2 1057.51925863277 1057.5181699358602 37.695 2 -1.462607872403579 0.4134565042873265 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2'] 88353 5493 QSIRFALGRW True NCI_RA007_Epitope_Rep1 1232.6778249628396 1232.67616490379 25.438 3 -1.4627354758427182 0.413458518027294 1.0 ['ENST00000412466.1_1_7:66764334-66767385:-|nuORF', 'ENST00000310939.8_7:74984852-74988231:-|nuORF', 'ENST00000431037.2_2_7:99930124-99933530:-|nuORF'] 88086 18678 QRRQQVFRR True NCI_RA007_Epitope_Rep3 1272.7275691199197 1272.72592490379 81.704 3 -1.4627610100543806 0.413458518027294 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 33604 16637 GLFQAILSL True PC9_epitope_Rep5 960.5644179200399 960.56332993586 69.0 2 -1.4628435087513727 0.4134769760569607 1.0 ['MAS1L|p.H232Q|1|0.15|ENSG00000204687|chr6:29487207-29487207|A/T|missense_variant'] 53847 14084 KTGSSGII True PC9_epitope_Rep2 761.42831837005 761.4277649679301 59.448 1 -1.4629258760659134 0.4134789892503141 1.0 ['nc|ENSG00000125207|Q96J94-3|PIWIL1', 'nc|ENSG00000125207|Q96J94-2|PIWIL1', 'ENSG00000125207|ENST00000245255|PIWIL1'] 64985 14938 LQGVPEDLLFF True PC9_epitope_Rep5 1276.6703395405596 1276.66924993586 62.464 2 -1.4629279387629766 0.4134789892503141 1.0 ['ENST00000571394.1_1_17:80918331-80919063:-|nuORF'] 97997 25014 SEPSFPRKLQT True PC9_epitope_Rep5 1288.67755017932 1288.67644993586 101.37 2 -1.4630891956487166 0.41349744639761743 1.0 ['ENST00000473195.5_1_3:49866538-49882012:-|nuORF'] 1637 10146 AEFRHLERLQQ True NCI_RA007_Epitope_Rep2 1425.7476954278097 1425.7465899358601 44.054 2 -1.4631806758087758 0.4135042695269783 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 17727 16320 EHQKKVRKM True NCI_RA007_Epitope_Rep4 1182.6655460269797 1182.66391490379 70.771 3 -1.4633554447607002 0.41351791530944626 1.0 ['EID3|p.R185Q|1|0.29|ENSG00000255150|chr12:104304488-104304488|G/A|missense_variant', 'ENSG00000255150|ENST00000527879|EID3'] 60283 24022 LGRWRRKRRW True PC9_epitope_Rep1 1468.8752364131196 1468.87412993586 97.209 2 -1.4634148549628092 0.41351791530944626 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2'] 102368 11349 SLTDDIKFF True H1975_Epitope_Rep2 1084.54407639828 1084.5429699358601 48.702 2 -1.4635603026272384 0.4135315604569461 1.0 ['CON__Q6IME9'] 94562 4441 RRRWSFFYCH True PC9_epitope_Rep6 1456.69349211032 1456.69183490379 24.237 3 -1.4635674983548415 0.4135315604569461 1.0 ['ENST00000374500.9_1_6:33385885-33386053:-|nuORF'] 91362 24402 RHCAGLQD True H1975_Epitope_Rep3 898.4079343619799 898.40682993586 101.59 2 -1.4636206989769154 0.4135383827925968 1.0 ['ENST00000378322.7_1_1:3547541-3547814:-|nuORF'] 8561 4823 ATVLASTP True H1975_Epitope_Rep1 758.4174193331801 758.41632993586 23.627 2 -1.463664998307486 0.41354520496952213 1.0 ['ENSG00000154447|ENST00000284637|SH3RF1', 'SH3RF1|p.S448Cfs*15|1|0.21|ENSG00000154447|chr4:169122103-169122104|CT/-|frameshift_variant'] 32616 25725 GGKAALAPA True PC9_epitope_Rep1 754.43373810366 754.4331849679301 104.0 1 -1.4637241608000389 0.4135636596289187 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 32381 19994 GFLRQLQVL True PC9_epitope_Rep3 1072.6393141958 1072.63820993586 82.152 2 -1.4637484376522252 0.4135704813530931 1.0 ['nc|ENSG00000293542|Q9UII6|DUSP13B', 'nc|ENSG00000293542|Q9UII6-4|DUSP13B', 'ENSG00000079393|ENST00000478873|DUSP13'] 58664 8359 LERIKNNDP True PC9_epitope_Rep2 1097.58292151849 1097.58182993586 37.525 2 -1.4638835188066504 0.41362383240080497 1.0 ['nc|ENSG00000136842|P28289-2|TMOD1', 'ENSG00000136842|ENST00000259365|TMOD1'] 62877 25292 LLNGKKRRRWI True PC9_epitope_Rep3 1438.8997198254597 1438.89862993586 102.69 2 -1.4639982736347184 0.41363065326633164 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 10956 15296 DAHAHPPVLRA True H1975_Epitope_Rep2 1182.62578938998 1182.62413490379 63.994 3 -1.4641200473757563 0.41366073817306237 1.0 ['ENST00000538966.5_1_X:153039107-153039924:+|nuORF'] 6204 21024 APPAHRAAA True PC9_epitope_Rep6 860.4616841869998 860.46058993586 93.691 2 -1.4641970669785787 0.41367919041526113 1.0 ['SSTR5|p.T347A|1|0.09|ENSG00000162009|chr16:1079907-1079907|A/G|missense_variant'] 108958 9607 TAEGYLYVQ True H1975_Epitope_Rep2 1042.4971262058598 1042.4960299358602 41.929 2 -1.4643308758705709 0.41370927405753105 1.0 ['ARHGAP10|p.V611Wfs*37|1|0.13|ENSG00000071205|chr4:148023374-148023374|C/-|frameshift_variant', 'ENSG00000071205|ENST00000336498|ARHGAP10'] 4199 12586 AIALERSLT True PC9_epitope_Rep5 972.56039516876 972.55928993586 53.412 2 -1.464448177514796 0.4137481826112242 1.0 ['nc|ENSG00000180739|Q9H228-2|S1PR5', 'ENSG00000180739|ENST00000333430|S1PR5'] 58174 10395 LEKSRLISG True PC9_epitope_Rep2 1001.5869442697699 1001.58637496793 45.306 1 -1.4644912004636415 0.4137481826112242 1.0 ['ENST00000337304.2_1_22:39917262-39917451:+|nuORF'] 53315 19945 KQLRQRQF True NCI_RA007_Epitope_Rep4 1102.63596015086 1102.63486993586 86.25 2 -1.4645243085572421 0.4137481826112242 1.0 ['OR4E2|p.V306F|1|0.2|ENSG00000221977|chr14:21665998-21665998|G/T|missense_variant'] 128357 17808 VPQRWAKL True PC9_epitope_Rep2 996.5868847001198 996.58578993586 73.791 2 -1.4645341989355216 0.4137481826112242 1.0 ['ENST00000367204.5_1_1:204095355-204095436:+|nuORF'] 125750 14135 VKSMRNVP True H1975_Epitope_Rep2 929.51167115453 929.51056993586 59.525 2 -1.4646158091221841 0.41375500139573834 1.0 ['ENSG00000126010|ENST00000380289|GRPR'] 55853 25022 LAPRAGVQCFK True PC9_epitope_Rep5 1188.6437479532399 1188.64210490379 101.4 3 -1.4647191193458675 0.41376382605054723 1.0 ['ENST00000610036.1_1_2:105953638-105953692:-|nuORF'] 21565 16166 ERPSNCPRSC True H1975_Epitope_Rep2 1147.48626133567 1147.48462490379 67.394 3 -1.4647666302455533 0.41376382605054723 1.0 ['ENST00000370631.3_1_10:99434638-99434824:+|nuORF'] 40906 12805 HSPLLQPGLA True PC9_epitope_Rep5 1031.5763795860698 1031.5752899358602 54.265 2 -1.4647907319703495 0.41376382605054723 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 34210 22512 GNKLVMLF True PC9_epitope_Rep1 920.51535955264 920.5142699358599 91.394 2 -1.4649569279755676 0.4138171667829728 1.0 ['nc|ENSG00000136160|P24530-2|EDNRB'] 100307 12762 SKGRVRRF True NCI_RA007_Epitope_Rep5 1004.5991807193199 1004.59808993586 55.762 2 -1.4651434220540032 0.4138356148451402 1.0 ['ENST00000474518.1_1_6:10527835-10528955:+|nuORF', 'ENST00000475577.5_1_6:10527835-10626837:+|nuORF'] 55989 5876 LASGAFGTV True NCI_RA007_Epitope_Rep2 821.42831837005 821.4272299358599 27.475 2 -1.4652303356583976 0.41384243213695887 1.0 ['EGFR|p.G719A|2|0.28|ENSG00000146648|chr7:55174015-55174015|G/C|missense_variant'] 55200 8579 LACLFENQFR True PC9_epitope_Rep3 1239.6070280913498 1239.6053849037899 37.95 3 -1.465351407684337 0.4138428262436914 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 142016 13275 YVLDRDSL True PC9_epitope_Rep1 979.49746055903 979.49636993586 55.926 2 -1.4653789611106802 0.4138428262436914 1.0 ['ENSG00000181143|ENST00000397910|MUC16'] 22733 6125 ETTARELPIP True NCI_RA007_Epitope_Rep1 1125.60298825673 1125.60188993586 27.863 2 -1.4654055530205499 0.4138428262436914 1.0 ['nc|ENSG00000185664|P40967-4|PMEL', 'nc|ENSG00000185664|P40967-5|PMEL', 'ENSG00000185664|ENST00000548747|PMEL', 'nc|ENSG00000185664|P40967-2|PMEL', 'nc|ENSG00000185664|P40967-3|PMEL'] 101380 12509 SLKEEERLIES True PC9_epitope_Rep1 1331.69325981311 1331.6921699358602 52.984 2 -1.4654232681189503 0.4138428262436914 1.0 ['ENSG00000109079|ENST00000226225|TNFAIP1', 'nc|ENSG00000109079|Q13829-2|TNFAIP1'] 26415 16440 FIAFPLFP True H1975_Epitope_Rep2 950.5265758593399 950.52546993586 68.456 2 -1.4654633691497883 0.4138428262436914 1.0 ['ENST00000288986.6_2_3:136667407-136667713:+|nuORF'] 116509 5143 TTRRLWDPNNP True NCI_RA007_Epitope_Rep1 1368.6898461985197 1368.6887499358602 24.089 2 -1.4654807058899466 0.4138428262436914 1.0 ['ENSG00000070366|ENST00000263073|SMG6', 'SMG6|p.G524Afs*41|1|0.32|ENSG00000070366|chr17:2299182-2299182|C/-|frameshift_variant'] 37400 13989 GVSTSSAQ True NCI_RA007_Epitope_Rep4 735.33989728847 735.3393449679301 61.079 1 -1.4656016772396814 0.4138428262436914 1.0 ['ENSG00000163872|ENST00000305135|YEATS2'] 19709 22887 ELRQLRRRWFH True PC9_epitope_Rep3 1595.89094604691 1595.8898499358602 93.301 2 -1.4656289601281836 0.4138428262436914 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 33345 16337 GKSKAALP True PC9_epitope_Rep3 770.46503823194 770.46394993586 67.974 2 -1.4656313697256196 0.4138428262436914 1.0 ['ENSG00000102580|ENST00000602402|DNAJC3'] 18623 8327 EKTEQKEPK True H1975_Epitope_Rep3 1115.5822528121496 1115.5811499358601 37.014 2 -1.465696510430684 0.4138428262436914 1.0 ['ENSG00000108176|ENST00000225171|DNAJC12'] 92581 5500 RMPWPRQQGW True NCI_RA007_Epitope_Rep5 1340.6560439724399 1340.65494993586 27.844 2 -1.4657147351973927 0.4138428262436914 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 127341 15603 VMMTASHL True PC9_epitope_Rep5 888.41974491564 888.41864993586 65.028 2 -1.4657430857265605 0.4138428262436914 1.0 ['ENSG00000196664|ENST00000380659|TLR7'] 61957 12028 LLDLPTVVP True H1975_Epitope_Rep3 965.57973363101 965.57862993586 51.426 2 -1.4658339361943853 0.41385645843992747 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 83818 23100 PVLLLLLFRLA True PC9_epitope_Rep6 1266.84276502962 1266.8411249037902 101.95 3 -1.4658342298527398 0.41385645843992747 1.0 ['ENST00000474436.1_1_9:35090976-35092764:-|nuORF', 'ENST00000465745.6_1_9:35090240-35092764:-|nuORF', 'ENSG00000165282|ENST00000378617|PIGO'] 137256 23529 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 97.818 2 -1.4658847128666348 0.4138584618246936 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 16730 18769 EESMKSKSDI True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 79.028 3 -1.465939881998819 0.4138584618246936 1.0 ['nc|ENSG00000170264|Q3B820-2|FAM161A', 'nc|ENSG00000170264|Q3B820|FAM161A', 'ENSG00000170264|ENST00000404929|FAM161A'] 74074 10851 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 46.767 1 -1.4659884256933904 0.41386527750322677 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 93850 21139 RRDVWKSNSH True H1975_Epitope_Rep3 1283.64831573971 1283.64667490379 88.29 3 -1.4660989470831003 0.41388372093023257 1.0 ['ENST00000347667.5_1_21:42649366-42649483:+|nuORF'] 66975 20047 LSPELRCMP True PC9_epitope_Rep3 1044.5096225492 1044.50852993586 82.36 2 -1.4661415672597171 0.4138861115632339 1.0 ['ENSG00000184560|ENST00000333870|SPEM2'] 18399 20607 EIVEEKQGWV True PC9_epitope_Rep5 1215.6135529404298 1215.61244993586 84.313 2 -1.466210208096116 0.4138861115632339 1.0 ['ENST00000437451.1_1:144598756-144607180:+|nuORF'] 89970 11500 RDGDRLWYENP True PC9_epitope_Rep1 1419.6531263366296 1419.6520299358601 49.114 2 -1.4662396105184548 0.4138861115632339 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 38882 21750 HHEKKKAGYI True PC9_epitope_Rep6 1209.6618405455297 1209.66019490379 96.554 3 -1.46624378020297 0.4138861115632339 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 17726 17160 EHQKKVRKM True H1975_Epitope_Rep2 1182.6655460269797 1182.66391490379 71.286 3 -1.4662503975019614 0.4138861115632339 1.0 ['EID3|p.R185Q|1|0.29|ENSG00000255150|chr12:104304488-104304488|G/A|missense_variant', 'ENSG00000255150|ENST00000527879|EID3'] 116310 24719 TTDVIYAAKMI True PC9_epitope_Rep3 1224.6424105405597 1224.64075490379 100.45 3 -1.4662631614437063 0.4138861115632339 1.0 ['ENSG00000183230|ENST00000433211|CTNNA3', 'ENST00000373735.1_1_10:67680090-67838726:-|nuORF'] 16214 8654 EEELAEIH True H1975_Epitope_Rep2 968.4450906329998 968.44454496793 38.247 1 -1.4662818274975506 0.4138861115632339 1.0 ['nc|ENSG00000204410|O43196-4|MSH5', 'ENSG00000204410|ENST00000375750|MSH5', 'nc|ENSG00000204410|O43196-2|MSH5', 'nc|ENSG00000204410|O43196-3|MSH5', 'ENST00000463094.5_1_6:31708243-31711078:+|nuORF', 'ENST00000482280.1_1_6:31708243-31713997:+|nuORF'] 21767 21495 ERVFFMDDVER True PC9_epitope_Rep3 1441.6659995194498 1441.6649099358601 87.972 2 -1.4663209156494101 0.4138861115632339 1.0 ['ZFYVE28|p.G408R|1|0.48|ENSG00000159733|chr4:2305118-2305118|C/G|missense_variant'] 66484 9281 LSHDESNSEP True PC9_epitope_Rep3 1113.45744622185 1113.45634993586 40.641 2 -1.4663307227819073 0.4138861115632339 1.0 ['MTUS1|p.A991Hfs*50|1|0.46|ENSG00000129422|chr8:17656001-17656001|T/-|frameshift_variant', 'MTUS1|p.I571Lfs*38|1|0.19|ENSG00000129422|chr8:17754097-17754097|T/-|frameshift_variant', 'nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'MTUS1-FGL1|3|fusion', 'MTUS1-FGL1|2|fusion', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 52533 23642 KLEKPRKPITF True PC9_epitope_Rep1 1355.8289058706298 1355.82727490379 95.728 3 -1.4663382604284132 0.4138861115632339 1.0 ['ENSG00000127804|ENST00000263092|METTL16'] 82895 11423 PSAETDVSLVY True PC9_epitope_Rep5 1179.5659340416698 1179.56428490379 48.937 3 -1.4663649101348786 0.4138861115632339 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'MEGF8|p.G1527Wfs*20|1|0.85|ENSG00000105429|chr19:42356406-42356407|-/T|frameshift_variant'] 9739 14311 AYGYDHSP True NCI_RA007_Epitope_Rep5 908.36644638948 908.36534993586 61.74 2 -1.4664518830980757 0.4138861115632339 1.0 ['ENSG00000145391|ENST00000274031|SETD7'] 101554 13326 SLLHFLEPSQ True PC9_epitope_Rep2 1169.6080736371698 1169.6069699358602 56.531 2 -1.466515385907341 0.4138861115632339 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 12475 10582 DKCKCCRFA True H1975_Epitope_Rep1 1072.4616268109598 1072.4605299358602 45.658 2 -1.4665502833595407 0.4138861115632339 1.0 ['ENSG00000182348|ENST00000333190|ZNF804B', 'ZNF804B|p.K671Efs*10|1|0.18|ENSG00000182348|chr7:89334989-89334990|-/G|frameshift_variant', 'ZNF804B|p.L588Qfs*31|1|0.28|ENSG00000182348|chr7:89334745-89334745|T/-|frameshift_variant'] 127109 21537 VLTKVGKG True PC9_epitope_Rep6 800.5119884243599 800.51088993586 95.716 2 -1.4666233215378497 0.4138901160222279 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 19100 20906 ELGHVVGFWHE True NCI_RA007_Epitope_Rep5 1308.6251206836398 1308.6234749037899 87.411 3 -1.4666842639875137 0.4138901160222279 1.0 ['ENSG00000095587|ENST00000357947|TLL2', 'ENST00000518656.5_1_8:22034120-22035374:+|nuORF', 'nc|ENSG00000168487|P13497-3|BMP1', 'ENST00000518913.5_1_8:22034120-22058713:+|nuORF', 'nc|ENSG00000168487|P13497-4|BMP1', 'nc|ENSG00000168487|P13497-5|BMP1', 'nc|ENSG00000168487|P13497-2|BMP1', 'nc|ENSG00000168487|P13497-6|BMP1', 'ENST00000520982.5_1_8:22034120-22069238:+|nuORF', 'ENSG00000168487|ENST00000306385|BMP1'] 67733 9099 LSYDMHLHH True PC9_epitope_Rep5 1151.5182130869503 1151.51656490379 39.945 3 -1.4666906030420903 0.4138901160222279 1.0 ['ENSG00000171532|ENST00000302584|NEUROD2'] 101670 23474 SLLVPLTPF True PC9_epitope_Rep3 985.58481901145 985.58427496793 95.572 1 -1.4667404338389158 0.4138901160222279 1.0 ['ENST00000401528.5_1_7:100881309-100881411:-|nuORF'] 122642 13140 VGGADDNLRI True H1975_Epitope_Rep1 1028.5250722892 1028.5239699358601 55.635 2 -1.4668456380055088 0.41390093347128093 1.0 ['nc|ENSG00000114982|Q9P2N6-8|KANSL3', 'ENST00000487070.5_1_2:97267510-97285240:-|nuORF', 'ENST00000597150.5_1_2:97261350-97297069:-|nuORF', 'nc|ENSG00000114982|Q9P2N6-6|KANSL3', 'ENST00000447759.5_3_2:97261350-97293793:-|nuORF', 'nc|ENSG00000114982|Q9P2N6-2|KANSL3', 'nc|ENSG00000114982|Q9P2N6-5|KANSL3', 'nc|ENSG00000114982|Q9P2N6-4|KANSL3', 'ENSG00000114982|ENST00000431828|KANSL3', 'nc|ENSG00000114982|Q9P2N6|KANSL3'] 109199 4331 TAQKSPRTLT True NCI_RA007_Epitope_Rep4 1101.61422164677 1101.6131299358601 23.004 2 -1.4668879098540912 0.41390093347128093 1.0 ['nc|ENSG00000187144|Q7Z572-2|SPATA21', 'ENSG00000187144|ENST00000335496|SPATA21'] 13747 11101 DQDNALEDLM True H1975_Epitope_Rep1 1162.4812184415398 1162.48012993586 47.664 2 -1.4669560880039234 0.41390093347128093 1.0 ['nc|ENSG00000165006|Q9NZ09-2|UBAP1', 'ENSG00000165006|ENST00000297661|UBAP1', 'nc|ENSG00000165006|Q9NZ09-3|UBAP1', 'nc|ENSG00000165006|Q9NZ09-4|UBAP1'] 23267 20018 EVPNEKCHL True PC9_epitope_Rep5 1067.5069796969099 1067.50588993586 82.051 2 -1.4669703610811515 0.41390093347128093 1.0 ['ENSG00000197520|ENST00000445590|FAM177B'] 19751 11073 ELRWQKFVMFY True H1975_Epitope_Rep1 1545.78024142605 1545.7786049037902 47.555 3 -1.4669893096405282 0.41390093347128093 1.0 ['ENSG00000182771|ENST00000327946|GRID1'] 13141 20144 DLREGRWRGEV True H1975_Epitope_Rep1 1371.70074523539 1371.6996499358602 83.83 2 -1.4670732631779961 0.4139077466753464 1.0 ['ENST00000216968.4_1_20:33764702-33764822:+|nuORF'] 32685 8601 GGSGHHQHY True H1975_Epitope_Rep2 978.4056258628602 978.40452993586 38.038 2 -1.4672332650552493 0.41393980959466214 1.0 ['SLC12A2|p.P754Tfs*35|1|0.14|ENSG00000064651|chr5:128151386-128151387|-/A|frameshift_variant', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'SLC12A2|p.V557Nfs*13|1|0.28|ENSG00000064651|chr5:128141876-128141886|CGTAACAGAGC/-|frameshift_variant'] 21313 7766 ERERFESDRDR True H1975_Epitope_Rep1 1493.6971164069298 1493.69600993586 34.83 2 -1.4672536270258576 0.41393980959466214 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 39807 18601 HNAEIALPVL True PC9_epitope_Rep3 1075.60259433391 1075.6014899358602 76.771 2 -1.467254810787039 0.41393980959466214 1.0 ['ENST00000577711.1_1_17:73389565-73389709:-|nuORF'] 36585 8405 GVHPAPGF True NCI_RA007_Epitope_Rep5 780.39187329168 780.39076993586 39.007 2 -1.4675047267050882 0.41400474264193055 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 89840 26161 RARAKSFLKRM True H1975_Epitope_Rep3 1362.8030425593 1362.8014049037902 109.01 3 -1.467592752498967 0.41400674183424385 1.0 ['nc|ENSG00000133121|Q9Y3M8-3|STARD13', 'nc|ENSG00000133121|Q9Y3M8-4|STARD13', 'nc|ENSG00000133121|Q9Y3M8-2|STARD13', 'ENSG00000133121|ENST00000336934|STARD13', 'STARD13|p.T556Nfs*4|1|0.09|ENSG00000133121|chr13:33129012-33129013|-/A|frameshift_variant', 'nc|ENSG00000133121|Q9Y3M8-5|STARD13'] 39861 12029 HPAEWRLAL True NCI_RA007_Epitope_Rep4 1091.58761297611 1091.58650993586 53.271 2 -1.4676315066689294 0.41400674183424385 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'KMT2A|p.D1707Ifs*2|1|0.35|ENSG00000118058|chr11:118493179-118493179|A/-|frameshift_variant'] 127253 8187 VLYLTPPP True NCI_RA007_Epitope_Rep5 898.5164050984599 898.51530993586 38.173 2 -1.4677369570160528 0.41402154836760074 1.0 ['ENST00000064778.8_1_11:73116189-73116408:-|nuORF'] 33330 23309 GKPSKKKNRKA True PC9_epitope_Rep2 1240.7727879768402 1240.7716899358602 95.134 2 -1.4677910217309553 0.41402154836760074 1.0 ['ENST00000349824.8_1_7:50470235-50470343:+|nuORF'] 3602 8437 AGNRSQNIKHK True H1975_Epitope_Rep1 1251.6796158679902 1251.6785099358601 37.379 2 -1.4678223210139225 0.41402154836760074 1.0 ['ENST00000513954.1_1_10:75008172-75008730:+|nuORF', 'nc|ENSG00000236756|A6NH13|DNAJC9-AS1'] 79831 11982 PEGLYRLK True H1975_Epitope_Rep3 974.5549158655 974.55380993586 51.246 2 -1.4678335261393363 0.41402154836760074 1.0 ['nc|ENSG00000186654|P85299-5|PRR5'] 47018 9185 ITRDFFDP True PC9_epitope_Rep3 1009.4868958753299 1009.48578993586 40.269 2 -1.4678528647558635 0.41402154836760074 1.0 ['ENSG00000106404|ENST00000308344|CLDN15'] 97124 12826 SDLNNSTGQSP True NCI_RA007_Epitope_Rep2 1118.48399532286 1118.4828899358602 54.507 2 -1.467901131659929 0.41402154836760074 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'ENST00000558953.1_1_14:103932392-103935580:+|nuORF'] 137490 7230 YEEFWIKYAKY True H1975_Epitope_Rep1 1538.74456710998 1538.74346993586 32.82 2 -1.467905753660707 0.41402154836760074 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 67444 4914 LSSQHEPTD True PC9_epitope_Rep1 1012.4461532621599 1012.44504993586 23.765 2 -1.467914014740508 0.41402154836760074 1.0 ['ENSG00000069956|ENST00000261845|MAPK6', 'ENST00000420752.1_1_10:50980319-50981214:+|nuORF'] 94664 7642 RRWTCCSVP True NCI_RA007_Epitope_Rep2 1106.5113538847 1106.5102499358602 34.35 2 -1.4679195443592703 0.41402154836760074 1.0 ['ENST00000300648.6_1_12:120593516-120594359:-|nuORF'] 130020 8348 VSALKGLPG True PC9_epitope_Rep2 840.5069030439199 840.50580993586 37.481 2 -1.4679957640490906 0.4140295419944914 1.0 ['ENST00000369827.7_1_1:110217734-110217830:+|nuORF'] 99638 19990 SIFRVPFP True PC9_epitope_Rep2 961.5385375253699 961.53744993586 82.295 2 -1.468004344610634 0.4140295419944914 1.0 ['ENST00000540458.5_1_12:6956081-6956183:+|nuORF'] 76653 12778 NQSDQLPGWSP True H1975_Epitope_Rep1 1227.5520153130299 1227.5514749679298 54.214 1 -1.4680358659512167 0.4140295419944914 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 128700 23936 VPWCFYPN True H1975_Epitope_Rep3 1024.4476739156398 1024.44656993586 99.782 2 -1.4680371019639205 0.4140295419944914 1.0 ['ENSG00000160182|ENST00000291527|TFF1'] 62998 14296 LLPPIHTY True H1975_Epitope_Rep3 952.5382031721999 952.53710993586 60.333 2 -1.4680435084926213 0.4140295419944914 1.0 ['ENST00000478553.1_1_20:4763250-4763406:-|nuORF'] 74644 15454 NGLKSLSA True NCI_RA007_Epitope_Rep4 788.43921740692 788.43812993586 67.111 2 -1.46804683008231 0.4140295419944914 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 139781 6039 YPFYYEMCWYV True H1975_Epitope_Rep3 1562.6250462242601 1562.62394993586 28.245 2 -1.4680519784049997 0.4140295419944914 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 20006 5134 ELYDYMFF True H1975_Epitope_Rep2 1126.4681345766999 1126.46647490379 24.825 3 -1.4680911010257718 0.4140295419944914 1.0 ['ENST00000265085.9_1_5:173386035-173386122:+|nuORF'] 3126 6931 AGAPPADP True H1975_Epitope_Rep1 694.32860432878 694.32805496793 31.703 1 -1.4682306486068142 0.4140479732242469 1.0 ['ENSG00000186907|ENST00000335099|RTN4RL2'] 80521 21364 PGPFSPPV True PC9_epitope_Rep3 796.41194002992 796.41084993586 87.474 2 -1.4682399178513745 0.41404997094712376 1.0 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS'] 45810 7845 ISDDYKIYCE True NCI_RA007_Epitope_Rep2 1247.53800504167 1247.5369099358602 35.144 2 -1.4682463033156468 0.41404997094712376 1.0 ['nc|ENSG00000121446|A5PLK6-4|RGSL1', 'nc|ENSG00000121446|A5PLK6-5|RGSL1', 'nc|ENSG00000121446|A5PLK6-3|RGSL1', 'nc|ENSG00000121446|A5PLK6-2|RGSL1', 'ENSG00000121446|ENST00000294854|RGSL1'] 121128 13913 VERRLRWTP True NCI_RA007_Epitope_Rep2 1211.6887239997097 1211.68762993586 58.772 2 -1.468424632860249 0.4140519685771394 1.0 ['ENST00000381154.5_1_X:2838703-2839996:-|nuORF'] 135241 6936 WFINFREFYYI True NCI_RA007_Epitope_Rep2 1596.7765359446 1596.77488490379 31.599 3 -1.4684570782130757 0.4140519685771394 1.0 ['PROX1|p.S625I|1|0.1|ENSG00000117707|chr1:214011561-214011561|G/T|missense_variant'] 134674 9610 VYSSGSERHL True PC9_epitope_Rep1 1133.5465360097699 1133.54542993586 41.821 2 -1.4685070242441176 0.4140820192207128 1.0 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 76325 6322 NPTKYTFFP True H1975_Epitope_Rep3 1113.54949613189 1113.54838993586 29.311 2 -1.4686068479845376 0.4141353103865015 1.0 ['ENSG00000179598|ENST00000321560|PLD6', 'ENST00000427497.3_1_17:17106083-17118331:-|nuORF'] 91561 3496 RIILKIPI True PC9_epitope_Rep2 964.6797224558 964.67862993586 18.728 2 -1.468670687244878 0.4141537388879205 1.0 ['ENST00000260746.5_1_10:104449690-104459203:-|nuORF'] 99976 7469 SIPEVLTELC True NCI_RA007_Epitope_Rep1 1102.55801221026 1102.5569099358602 33.043 2 -1.4687084606451024 0.41416054662080504 1.0 ['PCDHGA8|p.G676C|1|0.25|ENSG00000253767|chr5:141394839-141394839|G/T|missense_variant'] 48760 22921 KDKKKKEKRK True NCI_RA007_Epitope_Rep2 1314.8459529170998 1314.84430490379 95.578 3 -1.468764924777107 0.4141789744006879 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'nc|ENSG00000168916|Q9ULD9-2|ZNF608'] 48307 23699 IYQVRLKMI True PC9_epitope_Rep1 1162.6896355164997 1162.68852993586 95.952 2 -1.4688194506275492 0.4141829632469992 1.0 ['ENST00000526129.5_1_1:76198579-76227103:+|nuORF'] 79756 19425 PEAQDPGG True H1975_Epitope_Rep1 769.3242472243298 769.32369496793 80.902 1 -1.468820253613445 0.4141829632469992 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000565140.5_3_16:28489128-28499933:-|nuORF', 'ENST00000564574.5_2_16:28493646-28503072:-|nuORF', 'nc|ENSG00000261832|Q13286-4|CLN3', 'ENST00000566083.6_2_16:28493835-28503080:-|nuORF'] 15617 7140 EASERGHRCAR True H1975_Epitope_Rep1 1270.5949002678599 1270.59380993586 32.488 2 -1.4688322666178113 0.4141829632469992 1.0 ['ENST00000493776.1_1_19:12605931-12606006:-|nuORF'] 117423 8574 TVPVPPAA True PC9_epitope_Rep1 750.42759009406 750.42648993586 37.817 2 -1.4688705865571485 0.4141829632469992 1.0 ['ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2', 'WNK2|p.R1578Gfs*48|1|0.19|ENSG00000165238|chr9:93289369-93289369|C/-|frameshift_variant'] 7893 6635 ATAIEDRLQA True H1975_Epitope_Rep3 1086.56693710118 1086.5658499358601 30.476 2 -1.4690305642003327 0.4142130092259069 1.0 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2', 'ENST00000491840.1_1_13:26141407-26501380:+|nuORF'] 62292 9798 LLFTEEEM True H1975_Epitope_Rep1 1010.4630491962599 1010.46194993586 42.615 2 -1.4690820182086253 0.4142198157163938 1.0 ['ENST00000473040.6_1_4:128905516-128956965:+|nuORF'] 39890 16674 HPESFFSK True PC9_epitope_Rep5 977.46068112749 977.45958993586 69.14 2 -1.469120218959672 0.41424986056887897 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 16215 5636 EEELESENAPV True NCI_RA007_Epitope_Rep2 1244.54084149264 1244.53974993586 26.536 2 -1.4691722670203635 0.41425666647301457 1.0 ['ENST00000487163.5_1_1:161133902-161134067:+|nuORF', 'ENST00000485277.1_1_1:161133669-161135234:+|nuORF', 'nc|ENSG00000143258|Q9UK80-3|USP21', 'ENSG00000143258|ENST00000368002|USP21'] 141644 19998 YTSGNKGY True PC9_epitope_Rep6 888.39774651776 888.39664993586 89.588 2 -1.4692998685781298 0.4142745954485787 1.0 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 43540 24036 IGQALLVHARN True PC9_epitope_Rep2 1190.68838964654 1190.68728993586 97.956 2 -1.4693099393960325 0.4142745954485787 1.0 ['ENSG00000072840|ENST00000264956|EVC'] 117249 22260 TVLTEEVF True PC9_epitope_Rep1 936.48041351256 936.47930993586 90.44 2 -1.4693806672250975 0.4142745954485787 1.0 ['nc|ENSG00000258659|Q9BYJ4-2|TRIM34', 'ENST00000491385.1_1_11:5653561-5662456:+|nuORF', 'ENSG00000258659|ENST00000429814|TRIM34'] 122287 12648 VGAVFLILPFL True PC9_epitope_Rep6 1187.7318175983098 1187.7301649037902 60.115 3 -1.4694289186315885 0.4142745954485787 1.0 ['ENST00000412877.1_1_3:184079639-184080938:+|nuORF', 'ENST00000456318.5_2_3:184079522-184080848:+|nuORF'] 30566 6069 GAHGPPGPT True PC9_epitope_Rep3 789.37695150353 789.37584993586 28.394 2 -1.4694829150774733 0.4142745954485787 1.0 ['ENSG00000171812|ENST00000397799|COL8A2'] 24785 13860 FASVVDGAFSY True PC9_epitope_Rep6 1161.5342399905699 1161.5331499358601 65.134 2 -1.4694857132309915 0.4142745954485787 1.0 ['ENSG00000151229|ENST00000280871|SLC2A13'] 45254 11948 IPTTVDTKDLP True NCI_RA007_Epitope_Rep2 1198.64451871554 1198.64342993586 51.077 2 -1.4695043446322251 0.4142745954485787 1.0 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 55507 6795 LAGLEAHT True PC9_epitope_Rep4 810.4235673427801 810.42246993586 33.347 2 -1.4695116163141912 0.4142745954485787 1.0 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A'] 64945 17439 LQELLLYFI True PC9_epitope_Rep5 1150.66379760814 1150.6627099358602 72.079 2 -1.4695696449138267 0.4142745954485787 1.0 ['nc|ENSG00000078795|Q9NZM6-7|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-5|PKD2L2', 'ENSG00000078795|ENST00000508883|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-3|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-6|PKD2L2'] 84390 8878 QAAKDQFNEGR True NCI_RA007_Epitope_Rep4 1262.6003624877796 1262.59926993586 40.975 2 -1.4695932880941163 0.4142745954485787 1.0 ['ENSG00000167972|ENST00000301732|ABCA3'] 80868 9696 PHTAKKAI True PC9_epitope_Rep4 864.5181364339599 864.51702993586 44.931 2 -1.4695963679172697 0.4142745954485787 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'ENST00000479954.5_1_3:39149250-39159704:+|nuORF'] 61822 7239 LLATSLEWILC True PC9_epitope_Rep1 1260.67879604928 1260.6771449037901 32.658 3 -1.4696294126182878 0.4142745954485787 1.0 ['ENST00000525790.5_1_1:151742846-151746924:-|nuORF'] 21634 21576 ERRRRRRWHWH True H1975_Epitope_Rep1 1729.9362735298898 1729.9351699358601 89.661 2 -1.4697587000368564 0.4142745954485787 1.0 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 86470 17347 QKRRKRPV True PC9_epitope_Rep1 1066.6835790496198 1066.68248993586 71.537 2 -1.4697938003740252 0.4142745954485787 1.0 ['ENST00000493458.2_1_16:74346603-74346963:-|nuORF'] 131451 6371 VTISSNNR True NCI_RA007_Epitope_Rep3 889.4617437566501 889.46064993586 32.062 2 -1.4698871209807536 0.4142745954485787 1.0 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3'] 16307 8771 EEGETSAQVK True H1975_Epitope_Rep1 1076.4985827578398 1076.4974899358601 38.668 2 -1.469956126359627 0.4142745954485787 1.0 ['ENST00000566334.1_1_16:56401340-56419833:-|nuORF'] 112814 13185 TLIIQVMLVYF True H1975_Epitope_Rep3 1338.7621317504197 1338.76102993586 55.967 2 -1.4699765507826787 0.4142745954485787 1.0 ['ENST00000400151.6_1_4:728053-728236:+|nuORF'] 102127 8560 SLRPEPYVRAF True H1975_Epitope_Rep3 1333.7142700412098 1333.7131699358602 37.914 2 -1.4700012394312718 0.4142745954485787 1.0 ['ENST00000380535.8_1_17:7461620-7461785:+|nuORF'] 12967 11162 DLLKIKSEL True NCI_RA007_Epitope_Rep4 1057.63831113629 1057.63720993586 49.809 2 -1.4700927275081763 0.41429301612378605 1.0 ['ENSG00000198839|ENST00000361822|ZNF277'] 56578 9707 LDGWAFGWWLV True H1975_Epitope_Rep1 1348.6604435631998 1348.65934993586 42.265 2 -1.4701739978549042 0.4143230527966545 1.0 ['ENST00000591996.1_1_17:76416381-76416633:+|nuORF'] 142925 12288 YYYMFLYF True NCI_RA007_Epitope_Rep4 1208.5252555299996 1208.5241499358601 54.265 2 -1.4702234120885334 0.4143298561903213 1.0 ['ENSG00000196131|ENST00000341702|VN1R2', 'VN1R2|p.Y119N|1|0.65|ENSG00000196131|chr19:53258730-53258730|T/A|missense_variant'] 83596 23769 PVCHLLTA True PC9_epitope_Rep1 852.45275929608 852.45166993586 96.222 2 -1.4702776609177692 0.4143434625034848 1.0 ['ENST00000603928.2_2_9:136894278-136894515:+|nuORF'] 142795 13076 YYRRRHRHERT True H1975_Epitope_Rep3 1628.85087214008 1628.8497699358602 55.539 2 -1.470302324903358 0.4143434625034848 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 113909 23825 TNRPIRREQ True PC9_epitope_Rep3 1168.6425020832799 1168.64140993586 96.929 2 -1.4703968389398892 0.41434545243349985 1.0 ['ENST00000256442.9_1_5:68462858-68462948:+|nuORF'] 43297 19210 IFTYDPGTDVW True PC9_epitope_Rep1 1312.59756852312 1312.59592490379 78.687 3 -1.4704211710293325 0.41434545243349985 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 83979 17726 PVSIRFGR True PC9_epitope_Rep4 930.5399345077 930.53882993586 76.207 2 -1.470454343053681 0.41434744227105885 1.0 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 28843 8402 FTAESGTR True NCI_RA007_Epitope_Rep1 867.4086455546299 867.40754993586 36.685 2 -1.4704734339147314 0.41434744227105885 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1'] 125911 10768 VLCPAWLFLDV True H1975_Epitope_Rep1 1274.67331674602 1274.67220993586 46.381 2 -1.4705800925127934 0.4143726624387298 1.0 ['ENSG00000135914|ENST00000258400|HTR2B'] 38546 21710 HETGHVLG True H1975_Epitope_Rep2 848.41406528824 848.41296993586 89.81 2 -1.470586788742821 0.4143726624387298 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 42242 5619 IDSSTLAP True PC9_epitope_Rep1 802.4072485723 802.40614993586 26.439 2 -1.470636477675833 0.41438145347689237 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 18146 6026 EIITYYYP True NCI_RA007_Epitope_Rep2 1060.51171364084 1060.5106099358602 28.048 2 -1.4706467836988528 0.41438145347689237 1.0 ['ENSG00000179477|ENST00000647874|ALOX12B', 'ALOX12B|p.P658Rfs*5|1|0.16|ENSG00000179477|chr17:8072904-8072904|G/-|frameshift_variant'] 78968 27223 PAIFIYMC True PC9_epitope_Rep3 956.4499824147599 956.44888993586 112.03 2 -1.4706980299862387 0.41438145347689237 1.0 ['ENSG00000183706|ENST00000328795|OR4N4'] 80036 18594 PFGPPVSP True PC9_epitope_Rep3 796.4119400299201 796.41084993586 76.746 2 -1.470720917960594 0.41438825524402423 1.0 ['EPAS1|p.L667F|1|0.47|ENSG00000116016|chr2:46380673-46380673|G/T|missense_variant'] 59137 20067 LEYSVPEETE True PC9_epitope_Rep2 1194.5292141797797 1194.5281099358601 82.593 2 -1.470789462893606 0.4144350249680641 1.0 ['ENSG00000248383|ENST00000253807|PCDHAC1', 'PCDHAC1|p.D779Tfs*9|1|0.31|ENSG00000248383|chr5:140929225-140929225|C/-|frameshift_variant', 'nc|ENSG00000248383|Q9H158-2|PCDHAC1'] 18059 4877 EIGAQGGK True H1975_Epitope_Rep1 758.3922672145 758.39116993586 23.837 2 -1.4708465204616354 0.4144350249680641 1.0 ['ENST00000564646.1_1_16:89005738-89005978:-|nuORF'] 140491 22293 YRKYKPYLPL True PC9_epitope_Rep6 1339.7652429849097 1339.76359490379 98.721 3 -1.470906151426646 0.4144350249680641 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 125219 25383 VIILKMFW True PC9_epitope_Rep2 1048.61434531792 1048.61324993586 103.32 2 -1.4709504213565447 0.4144350249680641 1.0 ['ENSG00000115602|ENST00000233954|IL1RL1', 'IL1RL1|p.E356K|1|0.07|ENSG00000115602|chr2:102348040-102348040|G/A|missense_variant', 'IL1RL1|p.L359Rfs*4|1|0.08|ENSG00000115602|chr2:102348048-102348058|TCTGCTCTGGA/-|frameshift_variant'] 30605 16284 GAIVIERPNV True PC9_epitope_Rep4 1066.61349337078 1066.6123899358602 70.593 2 -1.4709575188440707 0.4144350249680641 1.0 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B', 'ENST00000589604.5_1_18:61064221-61077532:-|nuORF', 'ENST00000588059.5_1_18:61064418-61077532:-|nuORF'] 53581 18618 KRRKHQVP True NCI_RA007_Epitope_Rep2 1047.64137988447 1047.64087496793 77.218 1 -1.4709670023327306 0.4144350249680641 1.0 ['ENST00000272462.2_1_2:110873982-110874102:-|nuORF'] 28982 12764 FTEDVWLL True PC9_epitope_Rep5 1021.5120479940099 1021.51094993586 54.105 2 -1.471128579031805 0.4144350249680641 1.0 ['ENST00000306052.10_1_1:53712307-53712415:-|nuORF'] 86407 23352 QKHKKKEAAL True H1975_Epitope_Rep3 1179.7087907379498 1179.70714490379 97.479 3 -1.471145125987276 0.4144350249680641 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 22158 7419 ESSKVFKY True H1975_Epitope_Rep3 986.5072969667399 986.50618993586 33.515 2 -1.4711622432837548 0.4144350249680641 1.0 ['ENSG00000186230|ENST00000334181|ZNF749'] 122117 7258 VGAEPGLR True NCI_RA007_Epitope_Rep5 797.43955176009 797.43900496793 34.594 1 -1.4712173084629185 0.4144350249680641 1.0 ['ENST00000439785.5_1_19:35417953-35418121:+|nuORF', 'ENST00000303586.11_1_19:35417953-35420791:+|nuORF', 'ENST00000481564.1_1_7:23338971-23340720:+|nuORF', 'ENSG00000156928|ENST00000466681|MALSU1'] 127894 14526 VPGKVVPL True PC9_epitope_Rep5 807.5218248320699 807.52072993586 60.872 2 -1.471222589084594 0.4144350249680641 1.0 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 88886 10631 QVEARVSTL True H1975_Epitope_Rep2 1001.5505587610498 1001.54946993586 45.915 2 -1.471233924166813 0.4144350249680641 1.0 ['ENSG00000108798|ENST00000225941|ABI3'] 98805 5298 SGLYITHHYY True H1975_Epitope_Rep3 1252.5876725457601 1252.58602490379 25.458 3 -1.4712968528207921 0.4144370122630992 1.0 ['ENSG00000101638|ENST00000315087|ST8SIA5', 'nc|ENSG00000101638|O15466-2|ST8SIA5'] 59257 19295 LFFILNRRF True NCI_RA007_Epitope_Rep5 1224.7131478423996 1224.71204993586 81.094 2 -1.4713003842534822 0.4144370122630992 1.0 ['ENST00000372398.5_1_9:132995575-132995641:+|nuORF'] 105758 11586 SSGERWIRY True PC9_epitope_Rep5 1152.5676058075198 1152.56650993586 49.562 2 -1.4713740335225756 0.414440986576246 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 58102 15574 LEKEFNTLQPK True PC9_epitope_Rep1 1345.7241660185698 1345.7230699358602 64.729 2 -1.4714687400715598 0.414440986576246 1.0 ['DYNC2H1|p.L3796F|1|0.24|ENSG00000187240|chr11:103307726-103307726|G/C|missense_variant'] 80407 15846 PGKARQRA True H1975_Epitope_Rep3 882.5147823890198 882.51368993586 66.399 2 -1.4715245544486717 0.414440986576246 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 135472 18147 WIFRPLYLFFF True PC9_epitope_Rep1 1547.8329286219093 1547.83182993586 74.592 2 -1.4715324929925213 0.414440986576246 1.0 ['ENST00000508170.5_1_4:55131036-55131279:+|nuORF'] 56163 7154 LAVSEGFFRK True PC9_epitope_Rep4 1152.6291434349198 1152.6274949037902 34.797 3 -1.4715990357624933 0.4144545855686384 1.0 ['nc|ENSG00000204183|Q5U4N7|GDF5-AS1'] 42313 4645 IDYDRDRFDRE True H1975_Epitope_Rep3 1498.6800693604598 1498.67896993586 22.988 2 -1.4716476534768566 0.4144545855686384 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 93027 19257 RPLEVSVAP True PC9_epitope_Rep5 966.5498304850599 966.54872993586 79.113 2 -1.4717253204025382 0.41445970579015196 1.0 ['ENST00000374280.3_1_1:26362527-26362713:+|nuORF'] 105668 6009 SSEIWDLYFEM True H1975_Epitope_Rep2 1418.6064189546598 1418.60532993586 28.092 2 -1.4718428990278751 0.41445970579015196 1.0 ['ENST00000345122.7_1_14:32559748-32559826:+|nuORF'] 139317 24316 YLKPPWTLLLL True PC9_epitope_Rep2 1355.8216952318699 1355.82004490379 99.072 3 -1.4718596151745282 0.41445970579015196 1.0 ['SWT1|p.H623L|1|0.21|ENSG00000116668|chr1:185206659-185206659|A/T|missense_variant'] 5241 11512 ALPIKMRTWV True NCI_RA007_Epitope_Rep1 1213.70053455337 1213.69942993586 48.745 2 -1.4719045445154981 0.41445970579015196 1.0 ['ZSCAN1|p.S92I|1|0.12|ENSG00000152467|chr19:58038111-58038111|G/T|missense_variant'] 3561 15358 AGLVISPLW True PC9_epitope_Rep4 954.5538532363399 954.55274993586 67.006 2 -1.4719182967221873 0.41445970579015196 1.0 ['ENSG00000151665|ENST00000281382|PIGF'] 2476 5837 AEQLRGFNA True PC9_epitope_Rep5 1004.5039429217999 1004.50284993586 27.444 2 -1.471991236867573 0.41445970579015196 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 64012 16008 LPAAGLSGL True PC9_epitope_Rep6 797.46470387877 797.46360993586 73.889 2 -1.4721011821739087 0.41445970579015196 1.0 ['nc|ENSG00000258537|P0C7T7|FRMD6-AS1'] 103638 11328 SPTPASLWMKV True H1975_Epitope_Rep2 1215.6321802100301 1215.63108993586 48.622 2 -1.4721098456216564 0.41445970579015196 1.0 ['ENST00000531365.1_1_11:117860248-117860353:+|nuORF'] 123243 3203 VGLHAASK True NCI_RA007_Epitope_Rep2 781.4446371405301 781.44354993586 17.106 2 -1.4721310287884237 0.41445970579015196 1.0 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1', 'EHMT1|p.Y479Qfs*86|1|0.08|ENSG00000181090|chr9:137757939-137757940|-/CAGGG|frameshift_variant', 'nc|ENSG00000181090|Q9H9B1-4|EHMT1', 'ENST00000371394.6_1_9:140611085-140686569:+|nuORF'] 3801 10626 AGTYTLHII True PC9_epitope_Rep6 987.5389314481899 987.53782993586 51.691 2 -1.4721479570434808 0.41445970579015196 1.0 ['ENSG00000183668|ENST00000270077|PSG9', 'nc|ENSG00000183668|Q00887-2|PSG9'] 21362 5585 ERGEDCHQD True PC9_epitope_Rep3 1087.39888579991 1087.3977899358601 26.561 2 -1.4721779258443297 0.41445970579015196 1.0 ['ENST00000360833.5_1_16:67233165-67233273:+|nuORF'] 53482 17143 KRHWKKLW True NCI_RA007_Epitope_Rep5 1180.6981664845998 1180.69706993586 72.712 2 -1.4724774710464894 0.41454777661674214 1.0 ['ENSG00000154783|ENST00000285046|FGD5', 'nc|ENSG00000154783|Q6ZNL6-2|FGD5'] 26299 24590 FHIRVRTA True PC9_epitope_Rep4 998.5773826455799 998.57628993586 103.08 2 -1.4725272450066424 0.414549760832211 1.0 ['EPHA6|p.G737Efs*8|1|0.12|ENSG00000080224|chr3:97532366-97532366|G/-|frameshift_variant', 'nc|ENSG00000080224|Q9UF33|EPHA6', 'ENSG00000080224|ENST00000389672|EPHA6'] 17643 17731 EHITSVYL True PC9_epitope_Rep6 960.4916469026 960.49054993586 80.835 2 -1.4725324669816588 0.414549760832211 1.0 ['nc|ENSG00000198003|A5D8V7-2|ODAD3', 'ENSG00000198003|ENST00000356392|ODAD3'] 129742 20692 VRQLRHLHRTR True NCI_RA007_Epitope_Rep5 1470.8756303359398 1470.87397490379 86.552 3 -1.4726924758386335 0.41456816783346684 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 84576 24002 QCEECQCWQH True H1975_Epitope_Rep1 1292.4372625379199 1292.43616993586 99.606 2 -1.472756657873218 0.4145749645900573 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 37339 6015 GVSGDHVSI True PC9_epitope_Rep5 869.4242956187701 869.42318993586 28.13 2 -1.4728665638597862 0.41459337087130665 1.0 ['SUSD6|p.Q162H|1|0.24|ENSG00000100647|chr14:69708704-69708704|G/T|missense_variant'] 57003 16266 LDRILLESV True PC9_epitope_Rep1 1056.61791004488 1056.6168099358601 67.386 2 -1.472977640792559 0.4145953539129526 1.0 ['RASAL2|p.Q869Rfs*10|1|0.08|ENSG00000075391|chr1:178458318-178458318|C/-|frameshift_variant', 'ENSG00000075391|ENST00000367649|RASAL2', 'RASAL2|p.L221Ffs*27|1|0.19|ENSG00000075391|chr1:178442851-178442851|C/-|frameshift_variant', 'RASAL2|p.V308Cfs*13|1|0.62|ENSG00000075391|chr1:178443109-178443110|-/T|frameshift_variant'] 49838 5079 KHYSDFLERMP True PC9_epitope_Rep5 1421.6761702803296 1421.6745149037902 24.561 3 -1.4730057236369802 0.4145953539129526 1.0 ['nc|ENSG00000166169|Q9UGP5-2|POLL', 'ENSG00000166169|ENST00000370162|POLL'] 19191 19448 ELIAAFKEHQQ True PC9_epitope_Rep1 1312.6775501793202 1312.67644993586 79.622 2 -1.4730869204271706 0.41462536859458077 1.0 ['nc|ENSG00000125246|Q8N0X4-2|CLYBL', 'ENSG00000125246|ENST00000339105|CLYBL'] 24429 11875 FADGLLSK True H1975_Epitope_Rep2 849.4596184983301 849.45852993586 50.756 2 -1.47319823212116 0.4146389598328303 1.0 ['nc|ENSG00000178177|Q8N3X6|LCORL'] 13519 7659 DNQHLKKTI True H1975_Epitope_Rep2 1095.60365696307 1095.60254993586 34.414 2 -1.4732921903479816 0.4146389598328303 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 105559 9522 SSDEEWNIP True H1975_Epitope_Rep3 1075.44581890899 1075.44472993586 41.632 2 -1.473310504196921 0.4146409417009124 1.0 ['nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 13152 8719 DLRKHLWAI True H1975_Epitope_Rep1 1150.66111226954 1150.6600099358602 38.465 2 -1.4733983928184249 0.4146409417009124 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 110860 26029 TGRGGPPP True H1975_Epitope_Rep3 737.3820368839699 737.3814849679301 108.43 1 -1.473446362059683 0.41464971849788146 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 80678 8021 PGVDKPDP True H1975_Epitope_Rep3 823.4075829254699 823.40703496793 35.827 1 -1.4734715408620613 0.41464971849788146 1.0 ['ENSG00000168310|ENST00000393593|IRF2', 'nc|ENSG00000168310|P14316-2|IRF2', 'ENST00000512020.5_1_4:185339662-185350218:-|nuORF'] 85300 12687 QERDRKFL True PC9_epitope_Rep2 1090.5883412520998 1090.5872499358602 54.108 2 -1.4734784132777579 0.41464971849788146 1.0 ['ENSG00000159450|ENST00000614923|TCHH', 'TCHH|p.H1637N|1|0.08|ENSG00000159450|chr1:152108308-152108308|G/T|missense_variant'] 113323 15719 TLRLLESPTP True PC9_epitope_Rep4 1125.63937376545 1125.63772490379 68.388 3 -1.4736583045838967 0.4146749161317283 1.0 ['nc|ENSG00000167118|Q9BTM9-2|URM1'] 61793 10739 LLAQQLVSP True PC9_epitope_Rep4 967.5702315764698 967.56912993586 49.064 2 -1.473752913149415 0.4146749161317283 1.0 ['ENSG00000100294|ENST00000290429|MCAT'] 119795 4381 VCPMEGWI True PC9_epitope_Rep2 933.4088458787699 933.40774993586 22.202 2 -1.4737937592537036 0.4146768970040279 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 94654 15837 RRWNRDRCK True NCI_RA007_Epitope_Rep2 1288.6683399916399 1288.6672499358601 66.318 2 -1.473811588059331 0.4146768970040279 1.0 ['ENST00000519067.5_1_8:142220968-142221217:-|nuORF'] 48105 9362 IYNKILRLPTS True PC9_epitope_Rep1 1316.7816213250399 1316.7799649037902 40.868 3 -1.4739049323127484 0.414697279227412 1.0 ['ABCC9|p.S399P|1|0.14|ENSG00000069431|chr12:21910282-21910282|A/G|missense_variant'] 114653 9362 TQEIHENLLSL True H1975_Epitope_Rep1 1295.67213044571 1295.6710299358601 40.918 2 -1.4739076320093165 0.414697279227412 1.0 ['ARHGEF1|p.Q871H|1|0.24|ENSG00000076928|chr19:41906578-41906578|G/T|missense_variant'] 15883 8681 EDINDNAPRFV True NCI_RA007_Epitope_Rep1 1288.6047791618798 1288.60368993586 37.769 2 -1.473908332477457 0.414697279227412 1.0 ['PCDHGB1|p.Q121E|1|0.22|ENSG00000254221|chr5:141350621-141350621|C/G|missense_variant'] 99515 10349 SIDNSVNKKDL True H1975_Epitope_Rep3 1231.64083031743 1231.63972993586 44.861 2 -1.4740144150350631 0.4146992594656081 1.0 ['ENSG00000198146|ENST00000356321|ZNF770'] 66556 9573 LSIDWRDP True PC9_epitope_Rep6 1000.4977949121999 1000.49668993586 47.123 2 -1.4740260298799797 0.4146992594656081 1.0 ['ENSG00000053328|ENST00000338882|METTL24'] 136351 8309 WTEWNYFDKHL True H1975_Epitope_Rep3 1537.69901389989 1537.6973549037903 36.945 3 -1.474394185142039 0.41472359884402454 1.0 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A', 'ENST00000540952.5_1_22:38982050-39003412:-|nuORF'] 19902 9714 ELTRWLQEFTR True H1975_Epitope_Rep1 1477.7677621660496 1477.7666699358601 42.292 2 -1.4744424357836432 0.41472359884402454 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 6108 9030 APMHDLLL True NCI_RA007_Epitope_Rep3 908.47897404392 908.47786993586 42.615 2 -1.4744475420555534 0.41472359884402454 1.0 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 126960 19412 VLRLRSSS True NCI_RA007_Epitope_Rep5 916.5454138109601 916.54430993586 81.552 2 -1.4744701219712677 0.41472359884402454 1.0 ['nc|ENSG00000167994|Q8TBN0-2|RAB3IL1', 'ENSG00000167994|ENST00000394836|RAB3IL1'] 116622 10425 TVAGPKGK True PC9_epitope_Rep1 756.4493881678 756.44828993586 44.986 2 -1.474489499283888 0.41472359884402454 1.0 ['nc|ENSG00000132024|Q6P1N0-2|CC2D1A'] 132265 7311 VTVSPRSPP True H1975_Epitope_Rep3 938.51853035678 938.51742993586 33.094 2 -1.4744899222385925 0.41472359884402454 1.0 ['ENST00000566541.5_3_16:31886566-31901532:+|nuORF'] 90764 7195 RERRREQLRQW True NCI_RA007_Epitope_Rep2 1611.8818379151896 1611.88018490379 32.608 3 -1.474518780229241 0.41472359884402454 1.0 ['nc|ENSG00000125503|Q9BZL4-2|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-3|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-4|PPP1R12C', 'ENSG00000125503|ENST00000263433|PPP1R12C'] 40932 20191 HSSPEGKEEPE True NCI_RA007_Epitope_Rep3 1224.5258601348398 1224.5242049037902 87.976 3 -1.4745556415249328 0.414730391587939 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 70734 21046 LWRRRKWPFDR True H1975_Epitope_Rep1 1614.90078245462 1614.8996899358601 87.413 2 -1.4747159370553655 0.41474879008391075 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 122664 7582 VGGDKPTF True PC9_epitope_Rep5 819.41266830591 819.41156993586 34.112 2 -1.4747383765979825 0.4147555823777912 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'ZSWIM4|p.Q790Rfs*107|1|0.35|ENSG00000132003|chr19:13830447-13830447|C/-|frameshift_variant'] 79857 16394 PEKDGQMLSP True PC9_epitope_Rep2 1100.51721002744 1100.5161099358602 68.305 2 -1.4747743513469267 0.4147615179296739 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 37163 16457 GVQNVLKKHQA True NCI_RA007_Epitope_Rep3 1220.69895433024 1220.6978499358602 72.508 2 -1.4748805365464976 0.4147615179296739 1.0 ['SPTAN1|p.L822V|1|0.13|ENSG00000197694|chr9:128584747-128584747|C/G|missense_variant'] 74069 10347 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 44.809 1 -1.4748947660049974 0.4147615179296739 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 128187 2618 VPLVDGESDP True PC9_epitope_Rep2 1026.48695544498 1026.4858499358602 14.726 2 -1.4749519045684525 0.4147615179296739 1.0 ['ZFPM2|p.S674N|1|0.51|ENSG00000169946|chr8:105802103-105802103|G/A|missense_variant', 'nc|ENSG00000169946|Q8WW38-2|ZFPM2', 'ENSG00000169946|ENST00000407775|ZFPM2'] 101688 18702 SLMGVQMPN True PC9_epitope_Rep1 975.4517733199101 975.45066993586 76.727 2 -1.4749691580095647 0.4147615179296739 1.0 ['KDM5A-RAE1|1|fusion', 'KDM5A|p.N447Sfs*17|1|0.14|ENSG00000073614|chr12:334383-334392|CAGGCATGTT/-|frameshift_variant', 'ENSG00000073614|ENST00000399788|KDM5A', 'nc|ENSG00000073614|P29375-2|KDM5A'] 1557 7207 AEERGRHA True H1975_Epitope_Rep2 924.4525760552798 924.45146993586 32.656 2 -1.474994368726725 0.4147615179296739 1.0 ['nc|ENSG00000160469|Q8TDC3-2|BRSK1'] 126355 5924 VLISSQGL True PC9_epitope_Rep2 815.47526856247 815.47416993586 28.178 2 -1.4751505627613293 0.41479151918859014 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF', 'ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000486102.5_1_3:49728598-49742525:+|nuORF'] 74075 10943 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 47.125 1 -1.4752801760694008 0.4147983103560321 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 95083 16673 RTYRLRLEA True NCI_RA007_Epitope_Rep4 1176.6727395823998 1176.6716499358602 72.296 2 -1.475310169557349 0.4148051013658571 1.0 ['nc|ENSG00000162729|Q969P0-3|IGSF8', 'ENSG00000162729|ENST00000314485|IGSF8', 'nc|ENSG00000162729|Q969P0-2|IGSF8'] 119409 11416 VAQKQLGRLW True PC9_epitope_Rep6 1197.6982260542497 1197.6971299358602 54.973 2 -1.4754676209304496 0.4148302872062663 1.0 ['nc|ENSG00000113492|Q9BYV1-2|AGXT2', 'ENSG00000113492|ENST00000231420|AGXT2'] 65262 9789 LQTQERRHRLR True NCI_RA007_Epitope_Rep1 1491.8494751577498 1491.84836993586 42.08 2 -1.4754848512221048 0.4148302872062663 1.0 ['RP1L1|p.Q1605E|1|0.5|ENSG00000183638|chr8:10609285-10609285|G/C|missense_variant'] 131227 6043 VTESQFLKRN True PC9_epitope_Rep5 1220.6513354314798 1220.6496749037901 28.237 3 -1.4755494755895444 0.41483905405091787 1.0 ['LRRC7|p.R1423Gfs*9|1|0.35|ENSG00000033122|chr1:70076225-70076225|C/-|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7'] 103559 18194 SPSHHYRILN True NCI_RA007_Epitope_Rep3 1222.6207040095398 1222.6190549037901 79.684 3 -1.4755546443976642 0.41483905405091787 1.0 ['ENSG00000142149|ENST00000270112|HUNK'] 141522 22265 YTLLFDTSFF True PC9_epitope_Rep5 1252.6015912743999 1252.6004899358602 90.649 2 -1.4755811385329198 0.41483905405091787 1.0 ['ENST00000452722.7_1_11:115046973-115047108:-|nuORF'] 79902 21612 PEPM[Oxidation]ADRLLL True PC9_epitope_Rep2 1169.61144514589 1169.61034993586 88.605 2 -1.4756248383376676 0.4148690516251059 1.0 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3'] 37369 13795 GVSKKGGS True NCI_RA007_Epitope_Rep3 718.3973525949399 718.39680496793 61.59 1 -1.4756848785077992 0.41488744488280344 1.0 ['ENST00000240185.7_1_1:11083899-11083992:+|nuORF'] 75475 18594 NKIYVFFQHAF True PC9_epitope_Rep4 1412.72410644892 1412.72300993586 79.599 2 -1.4757474471074956 0.4149146013181101 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 92462 23739 RLRTRLEREL True PC9_epitope_Rep1 1340.80006535384 1340.79841490379 96.105 3 -1.4757771358274776 0.4149146013181101 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 111955 13313 TIQIPEHL True PC9_epitope_Rep1 949.52328138405 949.52218993586 56.07 2 -1.4758294171640358 0.4149146013181101 1.0 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4', 'nc|ENSG00000266412|Q13772-2|NCOA4'] 11342 23467 DENECNWMM True H1975_Epitope_Rep3 1170.3780163263 1170.37636490379 97.935 3 -1.4758332626694846 0.4149146013181101 1.0 ['ENSG00000110851|ENST00000228437|PRDM4'] 99902 13270 SILYKENSVIK True H1975_Epitope_Rep1 1292.73400242628 1292.73290993586 56.143 2 -1.4759000244560563 0.41493015268946953 1.0 ['ENSG00000219626|ENST00000615575|FAM228B'] 116894 6758 TVFEKEKKP True NCI_RA007_Epitope_Rep3 1104.6179100448799 1104.6168099358601 33.673 2 -1.4759376522282521 0.41493015268946953 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant', 'ABCA13|p.V1886Wfs*4|1|0.45|ENSG00000179869|chr7:48275317-48275317|G/-|frameshift_variant'] 53761 16367 KSSSGSGNP True NCI_RA007_Epitope_Rep1 819.37226004591 819.3717149679301 67.776 1 -1.475973906771853 0.41493015268946953 1.0 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2'] 76204 24223 NNNLNHLKF True PC9_epitope_Rep4 1112.57269118796 1112.5715899358602 101.65 2 -1.4760303261190157 0.41493015268946953 1.0 ['ENSG00000103404|ENST00000219689|USP31'] 27179 13678 FLLIFFSPFP True H1975_Epitope_Rep3 1226.6739683690198 1226.67286993586 57.906 2 -1.4760686045550258 0.4149601457262528 1.0 ['ENST00000326764.9_2_19:54972239-54972944:+|nuORF', 'nc|ENSG00000167615|Q96PV6-1|LENG8'] 30571 13422 GAHRGLAVL True PC9_epitope_Rep5 892.52428444356 892.52318993586 56.643 2 -1.4761908294572181 0.41499692543304983 1.0 ['ENST00000518820.1_1_8:143599542-143620974:+|nuORF'] 129198 10803 VQSRVPTL True PC9_epitope_Rep3 898.5236157372199 898.52250993586 46.521 2 -1.476191533499436 0.41499692543304983 1.0 ['ENSG00000173898|ENST00000533211|SPTBN2', 'nc|ENSG00000173898|O15020-2|SPTBN2'] 7311 23580 ARLHQRLLHQL True PC9_epitope_Rep4 1383.82113515159 1383.82002993586 99.007 2 -1.476332896164523 0.41501531464637087 1.0 ['nc|ENSG00000134326|Q5EBM0-2|CMPK2', 'nc|ENSG00000134326|Q5EBM0-3|CMPK2', 'nc|ENSG00000134326|Q5EBM0-4|CMPK2', 'ENSG00000134326|ENST00000256722|CMPK2'] 92944 19103 RPGSRQPIAIL True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.71858993586 80.351 2 -1.4763648766689699 0.4150172865860733 1.0 ['ENST00000564694.1_1_8:101926159-101926390:-|nuORF'] 32941 9918 GIAQWAIPV True NCI_RA007_Epitope_Rep5 953.5334521449298 953.53234993586 44.792 2 -1.4764221670984496 0.4150172865860733 1.0 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 3011 25346 AFLLRSRLLH True H1975_Epitope_Rep3 1224.7455105998401 1224.7438649037902 105.43 3 -1.476477091719143 0.4150212301909557 1.0 ['ENST00000462326.5_1_7:55503854-55639964:-|nuORF', 'ENST00000453256.5_1_7:55540449-55583655:-|nuORF', 'ENST00000428648.5_1_7:55540449-55639414:-|nuORF', 'ENST00000418904.5_1_7:55540449-55620397:-|nuORF'] 22958 11392 EVEMTRMAV True PC9_epitope_Rep2 1064.49945178832 1064.49834993586 49.142 2 -1.4765023641369184 0.4150212301909557 1.0 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139310627-139310981:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 122639 18617 VGFYPVPGP True PC9_epitope_Rep1 931.4803539429098 931.47924993586 76.398 2 -1.4765176820167725 0.4150212301909557 1.0 ['ENSG00000214513|ENST00000398468|NOTO'] 10462 18843 CILPEGKG True H1975_Epitope_Rep1 815.4211248146299 815.4205749679301 78.576 1 -1.4765262711235778 0.4150212301909557 1.0 ['THSD7A|p.V979G|1|0.28|ENSG00000005108|chr7:11446189-11446189|A/C|missense_variant'] 79316 6481 PAREQKCWRHW True NCI_RA007_Epitope_Rep2 1495.72552051459 1495.7238749037901 29.819 3 -1.4765694456938079 0.4150396176289748 1.0 ['ENST00000439313.5_1_2:165693974-165697706:-|nuORF'] 28827 6627 FSWFWFRLYWF True NCI_RA007_Epitope_Rep1 1683.8026911227896 1683.8010449037902 29.791 3 -1.4766064746145913 0.41504158884467696 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 36391 5612 GVFIIERET True PC9_epitope_Rep5 1062.57095985246 1062.5698699358602 26.589 2 -1.4766255679161604 0.41504158884467696 1.0 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF', 'nc|ENSG00000039068|P12830-2|CDH1', 'ENST00000567320.1_1_16:68842461-68842763:+|nuORF'] 84166 19244 PYILIAAG True PC9_epitope_Rep4 816.47454028648 816.47344993586 82.124 2 -1.4767482779287697 0.4150483747476857 1.0 ['ENST00000497497.1_1_10:119013719-119036774:+|nuORF', 'ENSG00000165646|ENST00000644641|SLC18A2'] 29118 15521 FTLIEESAK True PC9_epitope_Rep3 1036.54407639828 1036.5429699358601 64.852 2 -1.4767742908660682 0.41505034569161525 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ENSG00000125257|ENST00000645237|ABCC4', 'ABCC4|p.Y617*|1|0.14|ENSG00000125257|chr13:95166341-95166341|G/-|frameshift_variant', 'nc|ENSG00000125257|O15439-3|ABCC4'] 74066 9910 NDNGNGKN True H1975_Epitope_Rep1 831.34710792723 831.34655496793 43.056 1 -1.4767747563475278 0.41505034569161525 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 12874 16585 DLHYENFR True PC9_epitope_Rep2 1092.4988575413602 1092.49776993586 69.031 2 -1.4768455269183485 0.4150523165440921 1.0 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 68530 5990 LTGHLCAP True PC9_epitope_Rep1 810.40580910366 810.40470993586 27.856 2 -1.4769383975356656 0.4150523165440921 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 122002 25595 VFVFVKKLREE True NCI_RA007_Epitope_Rep5 1392.8129214533199 1392.81182993586 105.99 2 -1.4771077422102352 0.41507748700816627 1.0 ['ENST00000370654.5_1_1:84961112-84961604:+|nuORF'] 81728 21492 PLPAAAAL True PC9_epitope_Rep5 722.4326754745 722.43212496793 87.703 1 -1.4771370443656529 0.41507748700816627 1.0 ['ENSG00000187634|ENST00000616016|SAMD11'] 36744 6436 GVKGAKIK True PC9_epitope_Rep6 799.5279728416699 799.52686993586 33.382 2 -1.4772663826215016 0.4151135955095272 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 81230 22687 PKGVSRKLDRL True PC9_epitope_Rep4 1267.77245362367 1267.7707949037901 95.493 3 -1.4774538382670968 0.4151135955095272 1.0 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 117416 20861 TVPSEPIW True PC9_epitope_Rep5 927.4701831820299 927.46908993586 85.294 2 -1.4774945685285399 0.4151135955095272 1.0 ['ENSG00000178726|ENST00000377103|THBD'] 70073 17805 LVNIVKMFR True NCI_RA007_Epitope_Rep3 1118.66342076866 1118.66232993586 78.074 2 -1.4775123701352233 0.4151135955095272 1.0 ['ENSG00000215251|ENST00000380266|FASTKD5'] 107165 15986 SVIGSFNP True PC9_epitope_Rep6 819.41266830591 819.41211496793 73.8 1 -1.477584102569626 0.4151135955095272 1.0 ['ENST00000332499.3_1_17:43226005-43226326:+|nuORF'] 30975 18376 GASDGVFRATV True PC9_epitope_Rep3 1078.54072235334 1078.5396299358601 75.893 2 -1.4775852871235151 0.4151135955095272 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.L2931Wfs*101|1|0.21|ENSG00000086570|chr5:151542336-151542336|G/-|frameshift_variant', 'FAT2|p.E2578Dfs*50|1|0.03|ENSG00000086570|chr5:151543393-151543394|-/TAACCCAG|frameshift_variant'] 14051 8549 DRNAGQLERPQ True H1975_Epitope_Rep3 1282.6378106256598 1282.6367099358602 37.873 2 -1.4776046984545443 0.4151135955095272 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000476295.5_1_7:148984726-148990880:+|nuORF'] 119930 7291 VDLTYTYDHL True PC9_epitope_Rep5 1238.58191845898 1238.58028490379 33.009 3 -1.4776109576000118 0.4151135955095272 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1'] 65423 8917 LRFRRQLLYWF True NCI_RA007_Epitope_Rep5 1596.9041364995599 1596.90193987172 40.961 4 -1.4776403205486939 0.4151135955095272 1.0 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP'] 89105 3553 QVPRGESVQ True PC9_epitope_Rep4 998.5145076054998 998.51340993586 19.761 2 -1.4776646529450477 0.4151135955095272 1.0 ['ENST00000492808.5_1_1:26644456-26645257:+|nuORF'] 80706 18558 PGYPGEPL True PC9_epitope_Rep3 828.40176926904 828.40066993586 76.604 2 -1.4777812683213214 0.4151135955095272 1.0 ['ENSG00000181409|ENST00000326724|AATK', 'nc|ENSG00000181409|Q6ZMQ8-3|AATK', 'nc|ENSG00000181409|Q6ZMQ8-2|AATK'] 81674 13539 PLLREVLEKQP True NCI_RA007_Epitope_Rep2 1320.7765359445998 1320.77542993586 57.306 2 -1.4778171937905347 0.4151135955095272 1.0 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 105946 9514 SSSIILCI True NCI_RA007_Epitope_Rep2 834.45209058974 834.45098993586 41.621 2 -1.477825211000294 0.4151135955095272 1.0 ['ENST00000563648.1_1_15:72227626-72242653:-|nuORF'] 62874 24797 LLNGKKRRRWI True NCI_RA007_Epitope_Rep1 1438.8997198254597 1438.89862993586 102.66 2 -1.4778562266266868 0.4151135955095272 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 53905 14980 KTNEFNRTVFR True H1975_Epitope_Rep3 1410.7367963909398 1410.7356899358601 63.008 2 -1.4778740355124627 0.4151135955095272 1.0 ['KIAA0408|p.D443N|1|0.58|ENSG00000189367|chr6:127446992-127446992|C/T|missense_variant'] 42314 5130 IDYDRDRFDRE True NCI_RA007_Epitope_Rep1 1498.6800693604598 1498.67896993586 24.037 2 -1.4779049712439598 0.4151135955095272 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 64658 10164 LPVDGRPLP True NCI_RA007_Epitope_Rep3 962.5549158654999 962.55380993586 47.067 2 -1.477934730807649 0.4151135955095272 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 142144 10927 YVRPERLS True PC9_epitope_Rep3 1018.5559784946598 1018.55488993586 47.011 2 -1.4779443585890981 0.4151135955095272 1.0 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000570116.6_1_16:89971082-89977643:+|nuORF'] 101177 13153 SLGTTWTRL True PC9_epitope_Rep4 1033.55564414149 1033.5545499358602 58.489 2 -1.477957776812297 0.4151135955095272 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant'] 16900 23741 EFLLAALCVS True PC9_epitope_Rep4 1064.55761828744 1064.55652993586 99.696 2 -1.4779983116770652 0.41512037853133554 1.0 ['ENST00000215832.10_1_22:22118263-22123490:-|nuORF'] 38195 12494 HDSLFLAC True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 54.716 2 -1.4783709193823842 0.4151967435549525 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 64505 14861 LPQTPASVP True PC9_epitope_Rep3 908.4967322830399 908.49618496793 62.299 1 -1.4784861034717673 0.4152054921606828 1.0 ['nc|ENSG00000187144|Q7Z572-2|SPATA21', 'ENSG00000187144|ENST00000335496|SPATA21'] 46458 2621 ISTSRVLT True NCI_RA007_Epitope_Rep4 875.5076313199099 875.50652993586 14.705 2 -1.4784981069194658 0.4152054921606828 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF', 'nc|ENSG00000198301|Q9NVU7-2|SDAD1'] 135805 2687 WNEPLYHL True PC9_epitope_Rep3 1070.51853035678 1070.51742993586 14.801 2 -1.478581031730576 0.4152054921606828 1.0 ['ENSG00000172179|ENST00000306482|PRL'] 44755 21906 ILYRTLERRRL True PC9_epitope_Rep6 1487.9048647755499 1487.90320490379 97.164 3 -1.478733287693449 0.41521227372351655 1.0 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'MAP7D3|p.H864Qfs*2|1|0.07|ENSG00000129680|chrX:136219469-136219470|-/T|frameshift_variant', 'ENSG00000129680|ENST00000316077|MAP7D3'] 124416 4172 VGVFGNTL True NCI_RA007_Epitope_Rep4 805.4334037504899 805.43230993586 22.348 2 -1.478772429214605 0.415225836377341 1.0 ['ENSG00000171657|ENST00000302548|GPR82'] 97125 13736 SDLPKYLLF True H1975_Epitope_Rep1 1094.60119735158 1094.60010993586 57.976 2 -1.4788382513331728 0.415225836377341 1.0 ['ENST00000321341.10_2_18:48473838-48473949:+|nuORF'] 54119 24414 KVMVPQRRL True PC9_epitope_Rep1 1125.6804678151298 1125.67882490379 98.751 3 -1.4788603033806802 0.4152442135535043 1.0 ['STAB2|p.L1127M|1|0.08|ENSG00000136011|chr12:103695553-103695553|C/A|missense_variant'] 100027 13271 SIQRLWYFWFL True NCI_RA007_Epitope_Rep2 1557.8132558064897 1557.8121499358601 56.256 2 -1.4789771466541977 0.4152529597977713 1.0 ['EGFR-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'ZNF679-VOPP1|1|fusion', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 30585 11423 GAIIHHRSQ True PC9_epitope_Rep1 1017.54681079329 1017.54570993586 48.817 2 -1.4789855480208622 0.4152529597977713 1.0 ['POU3F4|p.P99Q|1|0.6|ENSG00000196767|chrX:83508620-83508620|C/A|missense_variant'] 52426 1037 KKRQKKRKA True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 5.762 3 -1.479002465767567 0.4152529597977713 1.0 ['nc|ENSG00000107562|P48061-3|CXCL12'] 69199 5348 LTSISPRWP True NCI_RA007_Epitope_Rep3 1055.57637958607 1055.5752899358602 28.044 2 -1.4791396381588244 0.4152665205644647 1.0 ['ENST00000359461.10_1_11:66052432-66055122:-|nuORF'] 71706 9636 M[Oxidation]EEHTEAGSA True H1975_Epitope_Rep2 1076.40805388172 1076.4069499358602 42.043 2 -1.4791589468054833 0.4152665205644647 1.0 ['ENSG00000140675|ENST00000330498|SLC5A2', 'nc|ENSG00000140675|P31639-2|SLC5A2'] 12587 9071 DKYRDQYNWFF True NCI_RA007_Epitope_Rep5 1580.7048275563195 1580.70372993586 41.547 2 -1.47929636923624 0.41527152993553773 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 49613 10291 KGDKQTVVS True PC9_epitope_Rep4 960.52400966004 960.52290993586 47.271 2 -1.479302504388024 0.41527152993553773 1.0 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 71459 10410 LYTSPETPMEP True NCI_RA007_Epitope_Rep1 1263.56930516995 1263.56820993586 44.476 2 -1.479317048736552 0.41527152993553773 1.0 ['KAT6B|p.P1276S|1|0.17|ENSG00000156650|chr10:75028650-75028650|C/T|missense_variant'] 18928 9739 ELEERLWE True PC9_epitope_Rep2 1102.5294889632999 1102.52838993586 42.802 2 -1.4793304832713539 0.41527152993553773 1.0 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 77321 7031 NSDRTSTVQNL True PC9_epitope_Rep3 1233.5949427541698 1233.5938499358601 32.056 2 -1.4793355776029997 0.41527152993553773 1.0 ['ENSG00000102104|ENST00000379984|RS1'] 126596 25427 VLLWVIKV True NCI_RA007_Epitope_Rep1 968.6422743179199 968.64172496793 105.22 1 -1.4795148626537176 0.41527152993553773 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'ENST00000465487.5_1_3:27418257-27433320:-|nuORF'] 57978 14429 LEGVLGTL True PC9_epitope_Rep3 800.4643695256 800.46326993586 60.606 2 -1.4795621961842305 0.41527152993553773 1.0 ['ENST00000401813.7_1_1:2130482-2130731:-|nuORF'] 22078 13734 ESNLVYWLWEK True NCI_RA007_Epitope_Rep1 1465.7241660185698 1465.7230699358602 57.437 2 -1.4795627066354122 0.41527152993553773 1.0 ['ENSG00000243710|ENST00000372492|CFAP57', 'nc|ENSG00000243710|Q96MR6-2|CFAP57'] 112773 12230 TLHRVPAP True PC9_epitope_Rep2 889.5133854066898 889.5122899358599 52.354 2 -1.4795757755250958 0.41527152993553773 1.0 ['ENSG00000129028|ENST00000249861|THAP10'] 136233 11882 WRVFREAEK True PC9_epitope_Rep3 1219.6461904813898 1219.6450899358601 50.721 2 -1.4795864811428934 0.41527152993553773 1.0 ['ENST00000526586.6_1_16:2012350-2012557:-|nuORF'] 37280 12458 GVRSLSFYRQI True PC9_epitope_Rep6 1324.72516907808 1324.7240699358601 59.345 2 -1.4795963709225515 0.41527152993553773 1.0 ['DCAF12L1|p.H361Q|1|0.57|ENSG00000198889|chrX:126551526-126551526|G/T|missense_variant'] 122699 19057 VGGGHGGP True PC9_epitope_Rep6 636.29797290684 636.29742496793 85.946 1 -1.479856645188013 0.4153198692234563 1.0 ['ENST00000306917.4_1_15:68570649-68570838:+|nuORF'] 28113 27801 FQYPLAAP True PC9_epitope_Rep5 905.4647038787698 905.46360993586 114.5 2 -1.4798596119221243 0.4153198692234563 1.0 ['ENST00000266643.5_1_12:58152865-58153108:+|nuORF'] 80817 25230 PHPAAIAL True PC9_epitope_Rep3 788.45447354824 788.4539249679301 102.43 1 -1.4799053310169854 0.4153218326841031 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 80816 25346 PHPAAIAL True PC9_epitope_Rep1 788.45447354824 788.4539249679301 102.43 1 -1.4799283120703726 0.4153218326841031 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 42316 10353 IDYEKMVDHR True H1975_Epitope_Rep1 1304.6183210510399 1304.61722993586 44.77 2 -1.4799755479716603 0.4153402042732764 1.0 ['ENSG00000008311|ENST00000417368|AASS'] 53751 20560 KSRKKSSP True PC9_epitope_Rep6 916.5454138109599 916.54430993586 91.812 2 -1.4800812185801675 0.4153653531805377 1.0 ['ENSG00000050030|ENST00000055682|NEXMIF'] 32533 10585 GGGGGAGKP True NCI_RA007_Epitope_Rep3 656.3241876546799 656.32363496793 48.686 1 -1.480103397226366 0.4153653531805377 1.0 ['ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L'] 80815 24655 PHPAAIAL True NCI_RA007_Epitope_Rep5 788.45447354824 788.4539249679301 102.32 1 -1.4802247252627883 0.41540209364602776 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 80814 24731 PHPAAIAL True NCI_RA007_Epitope_Rep1 788.45447354824 788.4539249679301 102.4 1 -1.4802388565019633 0.41540209364602776 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 12354 18293 DIRNYILNY True PC9_epitope_Rep2 1182.6033226098998 1182.6022299358601 75.689 2 -1.4803060057621507 0.4154088706498806 1.0 ['nc|ENSG00000204764|Q9H2T7-2|RANBP17', 'ENST00000523727.1_1_5:170308890-170323149:+|nuORF', 'ENST00000519130.5_1_5:170289037-170336799:+|nuORF', 'ENST00000443155.5_1_5:170288887-170338173:+|nuORF', 'ENSG00000204764|ENST00000523189|RANBP17'] 30657 4634 GAKSKKDP True PC9_epitope_Rep3 829.4657665079299 829.46466993586 22.919 2 -1.4804194899555807 0.41541279298912664 1.0 ['ENSG00000122870|ENST00000373886|BICC1', 'nc|ENSG00000122870|Q9H694-2|BICC1'] 68462 21578 LTFFCTNAT True NCI_RA007_Epitope_Rep5 1016.4637179026 1016.46262993586 90.086 2 -1.4804701393971693 0.41541279298912664 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D', 'SCNN1D|p.C421Pfs*60|1|0.11|ENSG00000162572|chr1:1290360-1290370|CTGCAGCTCTG/-|frameshift_variant'] 25719 5064 FESKVSASE True NCI_RA007_Epitope_Rep3 982.46074069714 982.4596499358599 26.912 2 -1.4804714753135289 0.41541279298912664 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 37340 10007 GVSGFGPE True PC9_epitope_Rep5 748.3391690124799 748.33806993586 43.469 2 -1.4804808045957432 0.41541279298912664 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 49365 9923 KESQVDELNIW True NCI_RA007_Epitope_Rep1 1359.6670450652698 1359.66594993586 42.601 2 -1.4805620569055031 0.4154195694761612 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 59741 12919 LGDPDPEQP True PC9_epitope_Rep2 966.42944056886 966.42834993586 54.988 2 -1.4806390849982862 0.4154331219789264 1.0 ['ENST00000588831.5_1_19:36428129-36428243:+|nuORF'] 106090 9250 STCVLEFEM True H1975_Epitope_Rep1 1057.4460192331298 1057.44492993586 40.491 2 -1.4806499505871897 0.4154331219789264 1.0 ['PCDHGB3|p.A257Lfs*6|1|0.19|ENSG00000262209|chr5:141371160-141371160|C/-|frameshift_variant', 'PCDHGB3|p.I394Sfs*12|1|0.22|ENSG00000262209|chr5:141371571-141371571|A/-|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 129779 10157 VRRGRLTSTST True NCI_RA007_Epitope_Rep3 1232.69493157896 1232.69437496793 47.041 1 -1.4807794147315796 0.4154466738533227 1.0 ['ENSG00000166225|ENST00000549921|FRS2'] 71373 23828 LYRLRRKLEKN True PC9_epitope_Rep5 1487.9048647755496 1487.90376993586 96.635 2 -1.4808086909473817 0.4154466738533227 1.0 ['ENST00000491144.5_1_3:183855641-183858240:+|nuORF'] 132638 7659 VVFRANAI True NCI_RA007_Epitope_Rep4 888.5181364339599 888.51702993586 36.117 2 -1.48083784483237 0.4154486339874584 1.0 ['ENSG00000112996|ENST00000507110|MRPS30', 'ENST00000508129.1_1_5:44813254-44813392:+|nuORF'] 18384 8761 EITETDTRAL True PC9_epitope_Rep1 1147.57208205127 1147.57098993586 38.538 2 -1.4808569203054762 0.4154486339874584 1.0 ['nc|ENSG00000105967|O14948-3|TFEC', 'nc|ENSG00000105967|O14948-4|TFEC', 'nc|ENSG00000105967|O14948-2|TFEC', 'ENSG00000105967|ENST00000265440|TFEC'] 83994 10435 PVSQKRGTI True PC9_epitope_Rep5 984.5716285588 984.57052993586 45.125 2 -1.480879705678321 0.41546700048682106 1.0 ['ENSG00000198796|ENST00000361673|ALPK2', 'ENST00000589204.1_1_18:56196243-56204256:-|nuORF'] 52429 18745 KKRRHLTPT True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6927099358602 81.096 2 -1.4809893834528538 0.4154969574036511 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 19722 23370 ELRRERERERE True PC9_epitope_Rep3 1556.81314921868 1556.8120499358602 95.173 2 -1.4810212235301334 0.41550373220826187 1.0 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 67445 16332 LSSQIKRVLM True PC9_epitope_Rep4 1173.69036379249 1173.68926993586 70.784 2 -1.4811365703540518 0.4155172813463455 1.0 ['ENST00000546023.1_1_6:160209518-160209776:-|nuORF'] 28737 7654 FSSGPQLT True H1975_Epitope_Rep3 835.40758292547 835.40703496793 34.424 1 -1.4811958046978246 0.4155172813463455 1.0 ['ENSG00000107771|ENST00000372088|CCSER2', 'ENST00000224756.12_1_10:86230212-86274020:+|nuORF'] 110452 5128 TFDLLAYFTK True NCI_RA007_Epitope_Rep1 1217.63322575585 1217.63158490379 24.029 3 -1.4813119967174888 0.4155240556798294 1.0 ['ENSG00000171806|ENST00000310392|METTL18'] 55551 14163 LAGRGSLPAL True PC9_epitope_Rep6 953.5658149023699 953.56470993586 66.351 2 -1.481405251090556 0.41555401019935095 1.0 ['ENST00000494150.1_1_22:39478019-39478325:+|nuORF'] 32155 12531 GEVIIPKE True H1975_Epitope_Rep3 883.5014833103099 883.5009349679301 53.397 1 -1.4814157293469912 0.4155607839501165 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 133241 8058 VVTFHANFNYV True NCI_RA007_Epitope_Rep2 1309.6455217750502 1309.6444299358602 35.975 2 -1.4814446708074211 0.41556755754386776 1.0 ['nc|ENSG00000261130|Q2QL34-2|MPV17L', 'ENSG00000156968|ENST00000396385|MPV17L'] 103472 7146 SPQEVLSPA True NCI_RA007_Epitope_Rep3 926.4709114580198 926.46980993586 35.227 2 -1.4814605430659895 0.4155743309806103 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 46053 4983 ISGNEYVYWYR True H1975_Epitope_Rep3 1448.67246479888 1448.6713699358602 24.296 2 -1.4816105516545581 0.41558110426034955 1.0 ['nc|ENSG00000211807|A0A087WT03|TRAV26-1'] 77055 19449 NRKEHKLKK True H1975_Epitope_Rep2 1179.72002412799 1179.71836490379 80.716 3 -1.4817507725188679 0.41563423538274324 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000144290|Q6U841-2|SLC4A10', 'nc|ENSG00000144290|Q6U841-3|SLC4A10', 'ENSG00000144290|ENST00000446997|SLC4A10', 'ENST00000446228.5_1_2:162758621-162834241:+|nuORF'] 135735 11348 WLWLDLWYLMF True NCI_RA007_Epitope_Rep1 1584.78392982416 1584.78282993586 48.113 2 -1.481853835792056 0.41564973519220294 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000507209.5_1_4:187118658-187122526:+|nuORF'] 12585 8791 DKYRDQYNWFF True NCI_RA007_Epitope_Rep3 1580.7048275563195 1580.70372993586 41.668 2 -1.4818583135418582 0.41564973519220294 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 99939 4735 SINNPDMR True PC9_epitope_Rep1 945.43381475665 945.43270993586 23.083 2 -1.4819005840082604 0.41564973519220294 1.0 ['nc|ENSG00000131473|P53396-2|ACLY', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 15626 5281 EASKVLLC True PC9_epitope_Rep1 861.4629896266099 861.46188993586 25.157 2 -1.4819183797237845 0.41564973519220294 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 47636 12981 IWEEAYQR True H1975_Epitope_Rep3 1093.5192586327698 1093.5181699358602 55.166 2 -1.4819465939186567 0.4156516902110301 1.0 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 89932 10840 RCWTIWKYMKD True NCI_RA007_Epitope_Rep1 1528.7319113346396 1528.7308099358602 46.159 2 -1.4819481792059879 0.4156516902110301 1.0 ['nc|ENSG00000166391|Q3SYC2-3|MOGAT2', 'ENSG00000166391|ENST00000198801|MOGAT2'] 43149 19502 IFDRELHRQTG True PC9_epitope_Rep4 1370.7054962626598 1370.70438993586 83.133 2 -1.4821951855110478 0.41570676987971356 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 120139 12360 VEAIREALVDK True NCI_RA007_Epitope_Rep2 1241.69795127073 1241.6968499358602 52.682 2 -1.4822099581065917 0.41570676987971356 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 87014 23346 QMLMKLVS True PC9_epitope_Rep2 948.5136453004799 948.51254993586 95.275 2 -1.4822247174046281 0.41570676987971356 1.0 ['EPHA5|p.E279Kfs*143|1|0.14|ENSG00000145242|chr4:65601717-65601717|G/-|frameshift_variant'] 63033 24493 LLPYVLRIWLW True PC9_epitope_Rep2 1470.8751277870597 1470.87349490379 99.804 3 -1.482301973820467 0.41572512891824553 1.0 ['ENST00000367742.7_1_1:171561357-171561441:+|nuORF'] 91390 24154 RHFRRGRRR True PC9_epitope_Rep5 1295.7660203173098 1295.7649299358602 97.894 2 -1.48235183407885 0.41574348753128765 1.0 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 19138 11061 ELGRLEIPAE True H1975_Epitope_Rep3 1125.6029882567298 1125.60188993586 47.637 2 -1.4824670706671015 0.4157637979582614 1.0 ['ENSG00000266714|ENST00000645453|MYO15B'] 16006 23004 EDSNAQEIK True PC9_epitope_Rep6 1032.4723680099999 1032.4712699358602 101.58 2 -1.482493819625397 0.4157637979582614 1.0 ['ENSG00000118961|ENST00000237822|LDAH', 'nc|ENSG00000118961|Q9H6V9-2|LDAH'] 95747 13290 RYHRHRHIEWA True H1975_Epitope_Rep1 1559.79704566207 1559.79594993586 56.223 2 -1.4825740437677428 0.4157637979582614 1.0 ['TRIM49C|p.P128H|1|0.56|ENSG00000204449|chr11:90035594-90035594|C/A|missense_variant'] 19378 15900 ELLRRKDTHIR True H1975_Epitope_Rep1 1435.83717913855 1435.8360899358602 66.469 2 -1.4826518907568018 0.41577251975620494 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000476207.1_1_10:119765292-119774614:-|nuORF'] 70034 13713 LVMYWKLNPKK True NCI_RA007_Epitope_Rep2 1418.8108132783398 1418.8097099358602 57.985 2 -1.4826607084070162 0.41577251975620494 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 113233 17636 TLQQHKLL True PC9_epitope_Rep3 979.5814649665099 979.58036993586 73.028 2 -1.4826874870479467 0.41577251975620494 1.0 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P', 'ENST00000415545.2_1_1:92108345-92109332:+|nuORF'] 29967 26252 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 108.64 3 -1.4827113516429713 0.41579087633106615 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 16669 7142 EEQTELESER True H1975_Epitope_Rep3 1248.54698950224 1248.54588993586 32.444 2 -1.4827731359615992 0.41579764553207266 1.0 ['ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 35643 10174 GTDLPSKST True PC9_epitope_Rep4 904.4501760134401 904.44906993586 46.809 2 -1.482810863063165 0.41580441457621226 1.0 ['ENSG00000198597|ENST00000355537|ZNF536'] 31194 9394 GCDAQAVP True NCI_RA007_Epitope_Rep2 759.32213904935 759.3215949679301 41.149 1 -1.4828940979828615 0.41581508515815085 1.0 ['nc|ENSG00000151090|P10828-2|THRB'] 26854 14825 FLDDRHRWQRL True NCI_RA007_Epitope_Rep2 1540.801127983 1540.80002993586 62.34 2 -1.4828964780589113 0.41581508515815085 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 21951 8502 ESEDRLNRLDK True H1975_Epitope_Rep1 1373.68990576817 1373.68880993586 37.634 2 -1.4829060904123847 0.41581508515815085 1.0 ['ENSG00000118292|ENST00000369099|C1orf54'] 123740 16452 VGRGRGLP True NCI_RA007_Epitope_Rep1 810.4824196315799 810.48187496793 68.108 1 -1.4829162156572426 0.41581508515815085 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.A690Hfs*28|1|0.39|ENSG00000188177|chr2:112325177-112325177|G/-|frameshift_variant', 'ENST00000476511.1_1_2:113067635-113069532:+|nuORF', 'ENST00000592618.5_1_19:1010351-1011343:-|nuORF'] 60500 8067 LHAIPPTL True PC9_epitope_Rep4 860.5119884243601 860.51088993586 38.481 2 -1.4829256701650455 0.41581508515815085 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 61063 12429 LIGMMITRA True NCI_RA007_Epitope_Rep1 1004.5510934383599 1004.54998993586 52.323 2 -1.4830250079507725 0.41582185352967754 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 95636 12029 RYDDYRDYDS True PC9_epitope_Rep5 1366.54257282814 1366.54146993586 51.264 2 -1.4830556845427378 0.41582862174436924 1.0 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000433556.6_1_3:50127867-50137485:+|nuORF', 'nc|ENSG00000003756|P52756-3|RBM5', 'nc|ENSG00000003756|P52756-4|RBM5', 'nc|ENSG00000003756|P52756-2|RBM5', 'ENST00000492472.1_1_3:50127867-50131398:+|nuORF', 'nc|ENSG00000003756|P52756-5|RBM5', 'ENST00000464087.6_1_3:50127867-50138068:+|nuORF'] 9132 13341 AVKKDSEL True PC9_epitope_Rep1 888.4916469025999 888.49054993586 56.175 2 -1.483112467611266 0.4158353898022314 1.0 ['PPM1B-ABCG8|1|fusion', 'PPM1B-ABCG8|2|fusion', 'ENST00000487286.1_1_2:44429163-44440857:+|nuORF', 'nc|ENSG00000138032|O75688-3|PPM1B', 'nc|ENSG00000138032|O75688-5|PPM1B', 'ENST00000409486.6_1_2:44428329-44436483:+|nuORF', 'nc|ENSG00000138032|O75688-4|PPM1B', 'nc|ENSG00000138032|O75688-2|PPM1B', 'ENSG00000138032|ENST00000282412|PPM1B'] 24600 13708 FAIILYFY True NCI_RA007_Epitope_Rep4 1048.5633552908798 1048.56224993586 59.951 2 -1.4832722072089832 0.4158605109193072 1.0 ['OR2G6|p.G299Pfs*2|1|0.06|ENSG00000188558|chr1:248522540-248522552|AGGGGCCTTGAGG/-|frameshift_variant', 'ENSG00000188558|ENST00000641804|OR2G6'] 24915 7379 FC[Carbamidomethyl]EC[Carbamidomethyl]DNFNC[Carbamidomethyl]DR True NCI_RA007_Epitope_Rep2 1535.5227839053198 1535.5216899358602 33.327 2 -1.4833139419690382 0.4158605109193072 1.0 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 101971 10243 SLQGWWALLTW True H1975_Epitope_Rep3 1359.6975573479099 1359.69646993586 44.447 2 -1.4833820062569565 0.41589044904768524 1.0 ['ENST00000535597.1_11:69063371-69063575:+|nuORF'] 84081 4420 PWFQVLEPQF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 22.013 3 -1.4834362907030203 0.4158972160756282 1.0 ['ENSG00000156966|ENST00000287590|B3GNT7'] 10671 25384 CPVWGIKA True NCI_RA007_Epitope_Rep3 872.4578446765198 872.45674993586 109.71 2 -1.4835624070540658 0.4159271530851039 1.0 ['ENST00000447648.6_1_7:97846532-97846739:-|nuORF'] 100207 18522 SIVPGPAAP True PC9_epitope_Rep6 807.4490538146299 807.44794993586 83.886 2 -1.4837097052536985 0.41596867433589363 1.0 ['ENST00000380834.6_1_2:25016041-25016209:+|nuORF'] 135478 5819 WIFWLWWRACW True NCI_RA007_Epitope_Rep1 1651.79108089327 1651.78942490379 26.688 3 -1.4838581526784715 0.41599379061873704 1.0 ['SLC6A14|p.L565Ffs*2|1|0.13|ENSG00000268104|chrX:116457685-116457686|-/TT|frameshift_variant', 'ENSG00000268104|ENST00000598581|SLC6A14'] 110857 26107 TGRGGPPP True H1975_Epitope_Rep1 737.3820368839699 737.3814849679301 108.4 1 -1.4838653557489274 0.41599379061873704 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 757 9968 AAVPKAEN True NCI_RA007_Epitope_Rep4 798.42356734278 798.42246993586 45.186 2 -1.483928328732878 0.4160121405898844 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.T606Nfs*97|1|0.33|ENSG00000205978|chr14:24409604-24409605|-/A|frameshift_variant'] 59275 13521 LFGAKAGG True H1975_Epitope_Rep1 719.3966243189499 719.3960749679301 57.129 1 -1.4839667365117242 0.4160189057377524 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant'] 88366 5155 QSLAFSGAAL True NCI_RA007_Epitope_Rep5 963.5025459394699 963.50144993586 26.523 2 -1.4840427026603953 0.41602085143353607 1.0 ['ENSG00000155269|ENST00000382487|GPR78'] 35642 10724 GTDLPSKST True PC9_epitope_Rep2 904.4501760134401 904.44906993586 46.567 2 -1.4841004131380158 0.41602085143353607 1.0 ['ENSG00000198597|ENST00000355537|ZNF536'] 89974 10438 RDGDRLWYENP True PC9_epitope_Rep4 1419.6531263366296 1419.6520299358601 47.861 2 -1.4842867804769426 0.41603438090052935 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 109512 6167 TDPRCKEMRQL True H1975_Epitope_Rep3 1375.6700393540698 1375.6689499358602 28.735 2 -1.4843278409553615 0.41603438090052935 1.0 ['ENST00000367959.6_1_1:161676930-161676990:+|nuORF'] 136788 12817 WYWRRTLGMQV True H1975_Epitope_Rep3 1494.75542366054 1494.7543299358601 54.519 2 -1.4844272661531592 0.416051799427797 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 94063 15124 RRLENRFYRRI True NCI_RA007_Epitope_Rep2 1577.9015107306097 1577.9004099358601 63.517 2 -1.484439473715617 0.416051799427797 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'ENST00000473691.1_1_X:79938122-79975072:-|nuORF'] 3879 9136 AGYVEGGK True PC9_epitope_Rep1 779.3813681776298 779.38026993586 39.993 2 -1.4844407254826404 0.416051799427797 1.0 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 55898 14710 LAQLGNCAW True NCI_RA007_Epitope_Rep1 974.46438660894 974.4638349679301 61.274 1 -1.484468617340674 0.416051799427797 1.0 ['ENST00000578759.1_1_17:60214444-60217453:-|nuORF'] 114859 5510 TQPDARLTAYV True H1975_Epitope_Rep2 1233.63535101417 1233.6337049037902 26.206 3 -1.4844812321404801 0.416051799427797 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant', 'ENST00000532739.1_1_16:16450692-16458759:+|nuORF', 'ENST00000532415.5_1_16:18480742-18495490:-|nuORF'] 133478 10509 VWDMPEHMDY True H1975_Epitope_Rep2 1321.51074474801 1321.5096499358601 45.442 2 -1.4844902302103793 0.416051799427797 1.0 ['ENSG00000170734|ENST00000372236|POLH'] 63836 4727 LNKLLLLVVP True PC9_epitope_Rep5 1120.75836669932 1120.7572699358602 23.232 2 -1.4845602756658387 0.41606050778354337 1.0 ['ENST00000398985.1_1_17:25887428-25904874:+|nuORF'] 30771 18617 GALRYLKL True PC9_epitope_Rep1 932.5807366905199 932.57962993586 76.398 2 -1.4845977601896558 0.41606050778354337 1.0 ['ENST00000467199.5_1_7:2274759-2281791:-|nuORF'] 77625 5627 NTENILKTV True NCI_RA007_Epitope_Rep5 1030.56587447202 1030.56476993586 28.332 2 -1.4846012452271644 0.41606050778354337 1.0 ['ENSG00000105605|ENST00000391767|CACNG7'] 81416 17792 PLEINRAI True PC9_epitope_Rep3 924.5392658013599 924.53816993586 73.638 2 -1.484631785334703 0.41606727127419296 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2', 'ENST00000502724.5_1_1:14065411-14095647:+|nuORF', 'ENST00000491134.5_1_1:14057588-14095647:+|nuORF'] 16126 22678 EEAPVYSVPQ True PC9_epitope_Rep3 1117.5291546101298 1117.52857496793 92.503 1 -1.4847019159496493 0.4160740346081679 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D'] 122722 14252 VGGHTSLA True NCI_RA007_Epitope_Rep5 740.3817025308 740.38115496793 61.513 1 -1.4847136855444523 0.4160807977854735 1.0 ['ENSG00000183655|ENST00000337975|KLHL25'] 22554 5252 ETIQAYYWHK True H1975_Epitope_Rep1 1337.64043639461 1337.63878490379 25.264 3 -1.4847465999151552 0.4160846854985349 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'ENST00000472081.1_1_19:42131969-42133331:-|nuORF'] 31061 17524 GATLNPWRKA True PC9_epitope_Rep5 1112.6090766966802 1112.6079699358602 72.412 2 -1.4847772247366338 0.4160846854985349 1.0 ['ENSG00000160703|ENST00000409109|NLRX1'] 67587 12482 LSVALACAHGH True PC9_epitope_Rep4 1077.53894853153 1077.53784993586 55.818 2 -1.4847861815192607 0.4160846854985349 1.0 ['ENST00000482108.1_2_7:94297339-94297486:+|nuORF'] 84830 7267 QEAHWVLCEVL True NCI_RA007_Epitope_Rep2 1325.6438075228898 1325.64270993586 32.888 2 -1.4847984953332853 0.4160846854985349 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 66678 7736 LSLAELDTIDH True H1975_Epitope_Rep1 1225.61903224369 1225.61792993586 34.719 2 -1.4848437151090927 0.416091448160845 1.0 ['ENST00000282120.6_1_2:85547765-85547996:-|nuORF'] 39385 12640 HKIKGLKN True NCI_RA007_Epitope_Rep2 936.58688470012 936.58578993586 53.78 2 -1.4851966968103727 0.41612813564033074 1.0 ['LCA5L|p.P543Afs*12|1|0.21|ENSG00000157578|chr21:39406268-39406269|-/C|frameshift_variant', 'ENSG00000157578|ENST00000288350|LCA5L'] 56253 18010 LCSSPVWRF True PC9_epitope_Rep1 1093.5378859023701 1093.53737496793 74.068 1 -1.4852059514501543 0.41612813564033074 1.0 ['ENST00000457023.1_1_3:15248030-15258947:+|nuORF', 'ENST00000253693.6_1_3:15248030-15253626:+|nuORF', 'ENST00000418994.1_1_3:15248030-15252351:+|nuORF'] 122245 22354 VGARARRRRST True PC9_epitope_Rep3 1284.7599318773598 1284.7588299358601 91.267 2 -1.4852615255449577 0.4161464787427473 1.0 ['ENST00000377918.7_1_13:58208937-58209021:+|nuORF'] 77871 6966 NVGAPEAGTV True PC9_epitope_Rep3 913.4505103666099 913.44940993586 31.806 2 -1.4853095791622462 0.4161610079207004 1.0 ['ENST00000591629.1_1_18:37115485-37380062:-|nuORF'] 56811 18349 LDNIIAGWP True PC9_epitope_Rep5 997.5232813840499 997.52218993586 75.596 2 -1.4854781403417894 0.4161610079207004 1.0 ['ENSG00000056291|ENST00000308744|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5-3|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5|NPFFR2'] 26738 6655 FKATNDYEHC[Carbamidomethyl]L True H1975_Epitope_Rep3 1396.6081505695897 1396.60704993586 30.55 2 -1.4855813930679462 0.4161610079207004 1.0 ['ENSG00000164363|ENST00000324642|SLC6A18'] 17069 15997 EGIAEWLRRR True H1975_Epitope_Rep3 1284.7051023398399 1284.70400993586 66.989 2 -1.4855892897811835 0.4161610079207004 1.0 ['nc|ENSG00000185615|Q13087-2|PDIA2', 'ENSG00000185615|ENST00000219406|PDIA2', 'ENST00000482665.1_1_16:334415-335240:+|nuORF'] 72595 24612 MLSDSDNR True NCI_RA007_Epitope_Rep1 936.39709489476 936.39598993586 101.94 2 -1.485617024497921 0.4161610079207004 1.0 ['ENST00000498524.5_1_3:15727727-15838055:-|nuORF', 'nc|ENSG00000206560|O15084-2|ANKRD28', 'nc|ENSG00000206560|O15084|ANKRD28', 'ENSG00000206560|ENST00000683139|ANKRD28', 'nc|ENSG00000206560|O15084-1|ANKRD28', 'ENST00000462657.1_1_3:15731457-15737643:-|nuORF'] 100251 15885 SIYEKERI True PC9_epitope_Rep5 1036.5553097883198 1036.5542099358602 66.091 2 -1.4856255405426302 0.4161610079207004 1.0 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 121549 11104 VFDEADRIL True PC9_epitope_Rep6 1076.5502244078798 1076.54912993586 53.643 2 -1.4856854227643557 0.4161610079207004 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31', 'DDX31|p.P455Qfs*31|1|0.3|ENSG00000125485|chr9:132646977-132646977|G/-|frameshift_variant'] 58845 8991 LESTGGGP True H1975_Epitope_Rep1 716.33408363204 716.3335349679301 39.49 1 -1.4857281422236388 0.4161610079207004 1.0 ['ENST00000535815.5_1_14:91710722-91710791:-|nuORF'] 36873 14913 GVLLMIPF True PC9_epitope_Rep4 888.51429692348 888.5131899358599 65.304 2 -1.485811230825961 0.4161610079207004 1.0 ['ENSG00000181009|ENST00000641181|OR52N5'] 139738 5251 YNYHRQKERTV True PC9_epitope_Rep3 1492.7535090842398 1492.7518649037902 25.277 3 -1.4858815621607033 0.41617452928506915 1.0 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 60467 14301 LGWRLIGV True PC9_epitope_Rep3 912.5545219426798 912.55342993586 60.095 2 -1.4858890372338545 0.41617452928506915 1.0 ['nc|ENSG00000106948|Q7Z591-6|AKNA'] 118883 10650 VADATAIKQHV True H1975_Epitope_Rep1 1151.62987171091 1151.6287699358602 45.922 2 -1.4859028987457044 0.41618128973239615 1.0 ['ENSG00000172421|ENST00000305286|EFCAB3', 'nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 55847 9731 LAPPSPWPFL True PC9_epitope_Rep5 1123.60661708519 1123.6055299358602 42.399 2 -1.486028375723753 0.4162227883279296 1.0 ['ENST00000221452.12_1_19:45541072-45541210:+|nuORF'] 86661 17833 QLHRRKVIS True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6921649037902 78.188 3 -1.4861725208238648 0.4162642859624136 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 5204 14560 ALNPEEMRRRR True NCI_RA007_Epitope_Rep1 1426.75754891886 1426.75644993586 60.683 2 -1.4862030025569546 0.41627104513559204 1.0 ['ENSG00000025800|ENST00000373625|KPNA6'] 20640 17977 EPWLNCDP True H1975_Epitope_Rep2 972.4011176460399 972.4005649679301 74.474 1 -1.4862352739387303 0.4162729841137511 1.0 ['nc|ENSG00000122126|Q01968-2|OCRL', 'ENSG00000122126|ENST00000371113|OCRL'] 119819 11776 VDARGRHQKK True H1975_Epitope_Rep3 1193.6741365647297 1193.67302993586 50.44 2 -1.4862999618862927 0.4162729841137511 1.0 ['ENSG00000206190|ENST00000555815|ATP10A', 'ENST00000555815.5_1_15:25924490-25961922:-|nuORF'] 65586 15652 LRSWWPRWWWA True PC9_epitope_Rep5 1628.8153214951599 1628.81368490379 65.217 3 -1.4863724398477343 0.41627492300210733 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 97005 4246 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 21.403 2 -1.4864078744229101 0.41627492300210733 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 44235 23751 IKLLCLFFL True NCI_RA007_Epitope_Rep3 1108.67186019404 1108.67127496793 102.95 1 -1.48641692462046 0.4162816816608195 1.0 ['ITGB6|p.E4K|1|0.12|ENSG00000115221|chr2:160200054-160200054|C/T|missense_variant'] 73725 9347 MYVPVCPPHI True PC9_epitope_Rep5 1154.56165812206 1154.56056993586 40.907 2 -1.486486851399031 0.4162874972502981 1.0 ['ENST00000488952.1_1_2:96809564-96810280:-|nuORF'] 37206 17941 GVRAVRSGWW True PC9_epitope_Rep5 1172.6203100867199 1172.6186549037902 74.027 3 -1.4865454476217295 0.4162874972502981 1.0 ['ENSG00000169894|ENST00000379458|MUC3A'] 3342 6301 AGGLSWAR True PC9_epitope_Rep3 816.4242360491199 816.42312993586 29.268 2 -1.4865991162295387 0.4162874972502981 1.0 ['ENST00000291074.9_2_17:613803-618010:-|nuORF'] 133180 5419 VVRNMEMEKFL True NCI_RA007_Epitope_Rep5 1394.7050278804597 1394.70337490379 27.533 3 -1.4866133384668865 0.4162874972502981 1.0 ['ENST00000502726.5_1_4:47685742-47840047:-|nuORF', 'ENST00000503821.5_1_4:47663725-47840047:-|nuORF', 'nc|ENSG00000145244|Q9Y5Q5-2|CORIN', 'ENSG00000145244|ENST00000273857|CORIN'] 64224 24436 LPGTRGFPKA True PC9_epitope_Rep5 1042.5923640033798 1042.59126993586 99.034 2 -1.4866346321230965 0.4162874972502981 1.0 ['ENST00000560221.1_1_15:99190394-99190574:-|nuORF'] 54276 1902 KWRLEQLQGP True PC9_epitope_Rep3 1253.6880552933699 1253.6863949037902 10.473 3 -1.4866432448108755 0.4162874972502981 1.0 ['nc|ENSG00000119950|P50539|MXI1', 'nc|ENSG00000119950|P50539-4|MXI1', 'nc|ENSG00000119950|P50539-2|MXI1', 'ENSG00000119950|ENST00000332674|MXI1'] 22522 18667 ETHDCNKS True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 78.615 2 -1.4867534825201516 0.4162942552156899 1.0 ['ENSG00000182348|ENST00000333190|ZNF804B', 'ZNF804B|p.K671Efs*10|1|0.18|ENSG00000182348|chr7:89334989-89334990|-/G|frameshift_variant', 'ZNF804B|p.L588Qfs*31|1|0.28|ENSG00000182348|chr7:89334745-89334745|T/-|frameshift_variant'] 99095 11261 SHGSWSDC True PC9_epitope_Rep5 877.3024662339301 877.3019149679301 48.305 1 -1.4867892085145094 0.416296193387052 1.0 ['nc|ENSG00000100767|O95428-4|PAPLN', 'nc|ENSG00000100767|O95428-6|PAPLN', 'nc|ENSG00000100767|O95428-5|PAPLN', 'ENSG00000100767|ENST00000644200|PAPLN', 'PAPLN|p.Q542Rfs*260|1|0.13|ENSG00000100767|chr14:73255011-73255011|C/-|frameshift_variant'] 39558 17359 HLGKRQKSHL True NCI_RA007_Epitope_Rep3 1202.6996230365799 1202.69852993586 76.176 2 -1.4868131305936505 0.416296193387052 1.0 ['ENST00000392782.5_3_2:160472757-160472841:-|nuORF'] 83869 24610 PVPDAICC True H1975_Epitope_Rep1 816.3509966494801 816.34988993586 101.97 2 -1.486826928511855 0.41630295101705317 1.0 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF', 'TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3'] 44491 8639 ILLHFPLV True NCI_RA007_Epitope_Rep4 950.5953241254999 950.59422993586 40.013 2 -1.4869985442354394 0.4163444395563685 1.0 ['ENSG00000159337|ENST00000290472|PLA2G4D'] 58272 13963 LELRKVPP True PC9_epitope_Rep6 950.5913013742199 950.59020993586 65.563 2 -1.4870347738538707 0.416361826264123 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 65372 6534 LRDSHRLRSPG True NCI_RA007_Epitope_Rep1 1292.706164969 1292.7045149037901 29.43 3 -1.4870694914309703 0.416361826264123 1.0 ['ENST00000545570.5_1_16:28874966-28878725:+|nuORF'] 97004 4153 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 21.047 2 -1.4870879004095594 0.416361826264123 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 32433 15749 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 67.295 2 -1.4871025516392151 0.416361826264123 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 79447 20608 PAVFSGHD True NCI_RA007_Epitope_Rep3 828.3766171503601 828.37552993586 89.767 2 -1.4871688273000956 0.416361826264123 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'ENST00000546525.5_1_6:170034618-170062491:-|nuORF'] 83995 9541 PVSRFFEVRND True PC9_epitope_Rep3 1364.6836981889198 1364.68260993586 41.647 2 -1.4871773103648298 0.416361826264123 1.0 ['ENST00000582056.5_1_17:7123303-7124179:+|nuORF', 'ENST00000582356.5_1_17:7123904-7124179:+|nuORF'] 82406 19361 PPLVVSST True NCI_RA007_Epitope_Rep5 798.4487194614601 798.44762993586 81.353 2 -1.4873766513814817 0.4163936703439175 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 48573 4022 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 20.294 3 -1.4874840003265182 0.4163936703439175 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 39100 10152 HHVHLVWP True PC9_epitope_Rep3 1023.54026886087 1023.5391699358601 44.004 2 -1.4874971672047987 0.4163936703439175 1.0 ['ENST00000278426.7_2_11:57263521-57268513:-|nuORF', 'ENST00000533515.5_1_11:57263521-57267149:-|nuORF'] 14886 14263 DWSLEQMVR True PC9_epitope_Rep6 1162.54409348162 1162.54243490379 66.755 3 -1.4876040967977278 0.41643033256548867 1.0 ['ENSG00000162598|ENST00000371201|C1orf87'] 61393 11315 LITMAIQK True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 51.618 2 -1.4876516333980188 0.41643033256548867 1.0 ['FOXC2|p.N87K|1|0.06|ENSG00000176692|chr16:86567596-86567596|C/A|missense_variant'] 4190 24771 AHWRARRKL True NCI_RA007_Epitope_Rep1 1192.7053771233598 1192.70428993586 102.56 2 -1.4877569094303646 0.4164602384535247 1.0 ['ENSG00000170846|ENST00000635031|unknown', 'ENST00000307533.10_1_4:6675831-6676296:+|nuORF'] 138525 6101 YHTRWYFKYFL True H1975_Epitope_Rep1 1622.8034193987799 1622.80177490379 28.536 3 -1.4878357087771574 0.41647856836939035 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3', 'GARNL3|p.M654Wfs*2|1|0.42|ENSG00000136895|chr9:127357240-127357240|C/-|frameshift_variant'] 29589 25690 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 106.32 3 -1.4880058618820309 0.41650847300675986 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 22828 16307 EVAGAVWTRR True PC9_epitope_Rep3 1143.61489035311 1143.61378993586 67.861 2 -1.4880764882524042 0.4165152269281076 1.0 ['ENST00000581616.2_1_17:16855864-16875385:-|nuORF'] 85075 6193 QEKDTQTKL True PC9_epitope_Rep3 1089.56660274801 1089.56550993586 28.861 2 -1.488132607409003 0.4165335555709887 1.0 ['VPS11|p.S379Dfs*2|1|0.05|ENSG00000160695|chr11:119081555-119081556|-/GACTGACC|frameshift_variant', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENSG00000160695|ENST00000621676|VPS11', 'ENST00000526829.1_1_11:118943968-118944238:+|nuORF'] 127701 16509 VPAGSRLLL True PC9_epitope_Rep5 924.5756513100799 924.57454993586 68.501 2 -1.4882640147870885 0.4165634585334799 1.0 ['ENSG00000186806|ENST00000335624|VSIG10L', 'nc|ENSG00000186806|Q86VR7-2|VSIG10L'] 119303 12096 VALVRASI True PC9_epitope_Rep3 827.52288746123 827.5217899358599 51.568 2 -1.4883138682187182 0.41658178619380526 1.0 ['ENSG00000175893|ENST00000380916|ZDHHC21'] 34203 24742 GNIRRARKRKY True NCI_RA007_Epitope_Rep5 1416.8538322621998 1416.85272993586 102.66 2 -1.48841183559157 0.41659529155767494 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 66950 14905 LSPDGDAN True NCI_RA007_Epitope_Rep5 787.33481190803 787.33426496793 64.0 1 -1.4884590850529655 0.41659529155767494 1.0 ['ENST00000542400.5_1_12:125432350-125435235:-|nuORF'] 142468 24480 YYHISSSA True PC9_epitope_Rep3 926.4133965819 926.41228993586 99.501 2 -1.4885063769796592 0.416603974491036 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 84454 5824 QAGRSLHSY True PC9_epitope_Rep4 1017.49919189453 1017.49808993586 29.264 2 -1.4885094916866366 0.416603974491036 1.0 ['FNDC7|p.P533H|1|0.16|ENSG00000143107|chr1:108728860-108728860|C/A|missense_variant'] 29979 26160 FWPANHNPF True PC9_epitope_Rep2 1128.5141136826799 1128.51247490379 106.64 3 -1.4885131816676638 0.416603974491036 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 104269 20695 SQIGAVVSHQ True PC9_epitope_Rep6 1024.5301576696402 1024.5290699358602 92.367 2 -1.4886075704443198 0.4166068742043745 1.0 ['nc|ENSG00000108439|Q9NVS9-3|PNPO', 'ENSG00000108439|ENST00000642017|PNPO'] 133221 20799 VVSPHGGL True PC9_epitope_Rep3 764.41808803952 764.41698993586 85.276 2 -1.4886225416734606 0.4166068742043745 1.0 ['ENSG00000130150|ENST00000380492|MOSPD2', 'nc|ENSG00000130150|Q8NHP6-2|MOSPD2'] 129142 22730 VQRAGGPL True PC9_epitope_Rep2 796.4555361773998 796.45498496793 92.928 1 -1.4886345561330658 0.4166068742043745 1.0 ['ENST00000542275.5_1_2:120124645-120124819:+|nuORF'] 119756 13793 VAYHLLYKRMW True H1975_Epitope_Rep3 1478.7856611596599 1478.7845699358602 58.357 2 -1.4886883247243816 0.4166068742043745 1.0 ['ENST00000508970.1_1_2:79924974-80004158:+|nuORF'] 10896 7379 CYLWLRPEVHT True H1975_Epitope_Rep3 1415.7019911053499 1415.70088993586 33.361 2 -1.4886974843447303 0.4166068742043745 1.0 ['ZNF396|p.H78Y|1|0.13|ENSG00000186496|chr18:35374061-35374061|G/A|missense_variant'] 114377 5278 TPSLIFGLITC True H1975_Epitope_Rep3 1163.6260322004298 1163.62492993586 25.384 2 -1.4887050217691957 0.4166068742043745 1.0 ['ENST00000569969.5_2_16:28993554-28995617:+|nuORF'] 64025 14118 LPAEDWIVANK True H1975_Epitope_Rep3 1254.66083748602 1254.66027496793 59.634 1 -1.4887423060616485 0.4166068742043745 1.0 ['nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 28806 19782 FSVRWSIIFP True H1975_Epitope_Rep2 1250.68117900778 1250.68008993586 82.066 2 -1.4887655955090182 0.4166068742043745 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|401|3|anti-sense'] 106709 11284 STVDYLLRLQ True H1975_Epitope_Rep3 1206.66083748602 1206.6597499358602 48.509 2 -1.4887731951722993 0.4166068742043745 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 79321 23921 PARGRNVA True PC9_epitope_Rep2 839.47258322387 839.4720349679301 97.491 1 -1.4889888514728937 0.41663677078149775 1.0 ['ENST00000406462.6_1_1:109419695-109427993:+|nuORF'] 49359 21351 KESKDILI True PC9_epitope_Rep2 944.5542471591599 944.55314993586 87.594 2 -1.48913423110196 0.4166387001955724 1.0 ['ENSG00000180043|ENST00000424985|GARIN5B'] 107981 8060 SWDAGLECL True H1975_Epitope_Rep3 992.42733239388 992.42622993586 35.976 2 -1.4891387228030637 0.4166387001955724 1.0 ['ENST00000349155.6_3_12:115121317-115121416:-|nuORF'] 132746 5402 VVILVLLTVL True PC9_epitope_Rep1 1080.75221868972 1080.75112993586 25.612 2 -1.4892519649559866 0.41664255875580036 1.0 ['ENSG00000187266|ENST00000222139|EPOR', 'nc|ENSG00000187266|P19235-3|EPOR'] 91226 23778 RGFIRHLG True NCI_RA007_Epitope_Rep4 954.55116789774 954.55006993586 103.08 2 -1.4892810558289669 0.41664255875580036 1.0 ['ENST00000420498.1_1_1:161123670-161129115:-|nuORF'] 97003 3851 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 19.895 2 -1.4892884339393915 0.41664255875580036 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 4951 6830 ALGGEPPPG True PC9_epitope_Rep5 793.3970182417698 793.39592993586 31.244 2 -1.4892986393336733 0.41664255875580036 1.0 ['ENST00000455784.6_1_22:19710257-19710719:+|nuORF'] 84099 22211 PWNHSILA True PC9_epitope_Rep2 936.4817509252399 936.48064993586 90.914 2 -1.4893109737977344 0.41664930917170034 1.0 ['ENSG00000186198|ENST00000334287|SLC51B'] 18009 4081 EIEAKRDDP True NCI_RA007_Epitope_Rep2 1071.5196525555898 1071.5185499358602 20.513 2 -1.4894384398468414 0.4166975237213608 1.0 ['ENST00000470137.5_1_13:44398084-44434086:-|nuORF'] 39478 8602 HLDHALLYGP True H1975_Epitope_Rep2 1134.5821932425 1134.58108993586 38.041 2 -1.4894434227126647 0.4166975237213608 1.0 ['ENST00000462455.1_1_1:16011053-16044472:+|nuORF'] 27149 11169 FLKSRSSV True PC9_epitope_Rep3 922.52361573722 922.52250993586 47.963 2 -1.4894559390627138 0.4167042732669143 1.0 ['ENST00000540159.3_1_10:133783899-133784124:-|nuORF'] 77256 8376 NRYIYFYEKEN True NCI_RA007_Epitope_Rep1 1537.7201432672898 1537.71904993586 36.582 2 -1.4896873427975463 0.4167110226562681 1.0 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 137382 13051 YDTERGFSI True H1975_Epitope_Rep1 1086.4981888350198 1086.49767496793 55.287 1 -1.4899071318408417 0.4167360918263445 1.0 ['GRIA3|p.S817Rfs*3|1|0.6|ENSG00000125675|chrX:123482810-123482810|C/-|frameshift_variant', 'nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 129022 17232 VQLRESGPSL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 71.101 2 -1.489931646437938 0.4167360918263445 1.0 ['CON__ENSEMBL:ENSBTAP00000011227', 'CON__ENSEMBL:ENSBTAP00000033053', 'CON__Q1RMK2'] 10622 18020 CNTELINDRL True PC9_epitope_Rep6 1189.57612188589 1189.57447490379 81.942 3 -1.4899385509547456 0.41674284061324846 1.0 ['MYH9|p.G1743C|1|0.23|ENSG00000100345|chr22:36285705-36285705|C/A|missense_variant'] 112413 6046 TLCLTMIPGP True H1975_Epitope_Rep3 1044.53477466788 1044.5336699358602 28.269 2 -1.4899819245934105 0.41675633771853704 1.0 ['SLC22A24|p.N56Mfs*18|1|0.4|ENSG00000197658|chr11:63143613-63143613|T/-|frameshift_variant'] 1483 20147 AEEIRILAVI True H1975_Epitope_Rep2 1125.6757592741699 1125.67411490379 83.489 3 -1.4900546097196674 0.41675633771853704 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN', 'nc|ENSG00000130518|Q9H0B3-3|IQCN', 'ENST00000599638.2_1_19:18367992-18369432:-|nuORF'] 45914 7269 ISEDPVPVKRH True H1975_Epitope_Rep1 1275.69353459663 1275.69187490379 32.97 3 -1.4902072331758953 0.41676308603693246 1.0 ['nc|ENSG00000146469|P01282-2|VIP', 'ENSG00000146469|ENST00000367244|VIP'] 66000 8058 LSEAKERYQQG True NCI_RA007_Epitope_Rep2 1307.64697832703 1307.6458899358602 35.975 2 -1.4902855441254501 0.4167814043897303 1.0 ['ENSG00000114446|ENST00000264538|IFT57'] 124045 16777 VGSIPLDP True PC9_epitope_Rep1 796.43306939732 796.43196993586 69.356 2 -1.4903645086091304 0.4167997223186394 1.0 ['ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 50094 24615 KKIKLAAA True NCI_RA007_Epitope_Rep3 841.5749230340898 841.57382993586 106.46 2 -1.4904098852347147 0.416803572668163 1.0 ['ENSG00000118997|ENST00000312428|DNAH7'] 30992 20620 GASGFTGQ True H1975_Epitope_Rep1 723.3187679210698 723.3182149679301 85.732 1 -1.4904747202038 0.416803572668163 1.0 ['ENSG00000143653|ENST00000366510|SCCPDH'] 77809 18541 NVAAGYLYGFV True NCI_RA007_Epitope_Rep4 1172.5866099166 1172.58550993586 80.229 2 -1.490497548615178 0.416803572668163 1.0 ['TMEM64|p.N273Tfs*3|1|0.05|ENSG00000180694|chr8:90631685-90631685|T/-|frameshift_variant', 'nc|ENSG00000180694|Q6YI46-4|TMEM64', 'ENSG00000180694|ENST00000458549|TMEM64'] 37560 7719 GVVMGMII True PC9_epitope_Rep2 818.4394177310598 818.43832993586 35.068 2 -1.4905047944763468 0.416803572668163 1.0 ['ENSG00000168903|ENST00000342868|BTNL3', 'nc|ENSG00000168903|Q6UXE8-2|BTNL3'] 56472 17738 LDEQYQKYK True PC9_epitope_Rep6 1213.5979028762897 1213.5968099358602 80.863 2 -1.490561358214103 0.41681031989356165 1.0 ['nc|ENSG00000155959|P61758-2|VBP1', 'ENSG00000155959|ENST00000286428|VBP1', 'MTM1-VBP1|1|fusion'] 136162 12832 WRRREEEERWR True NCI_RA007_Epitope_Rep1 1686.8451180532998 1686.8440299358601 53.903 2 -1.4906492582192412 0.4168238138760022 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 113088 16933 TLNRQKYRHVD True PC9_epitope_Rep3 1428.75859446468 1428.7574899358601 70.288 2 -1.4906508225073314 0.4168238138760022 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 130557 18952 VSRKGRTP True H1975_Epitope_Rep2 899.5300980999899 899.52900993586 78.668 2 -1.4908257931121511 0.41682573838198034 1.0 ['ENST00000496823.1_1_3:187455030-187463237:-|nuORF'] 37372 18814 GVSKKGGS True PC9_epitope_Rep6 718.3973525949399 718.39680496793 85.011 1 -1.4908586258678191 0.41682573838198034 1.0 ['ENST00000240185.7_1_1:11083899-11083992:+|nuORF'] 63064 19369 LLQFFFQKQP True NCI_RA007_Epitope_Rep4 1294.7073937556197 1294.70628993586 83.767 2 -1.4909005638322723 0.4168363333487576 1.0 ['ENSG00000113119|ENST00000394671|TMCO6', 'nc|ENSG00000113119|Q96DC7-2|TMCO6', 'ENST00000515265.2_1_5:140022188-140024328:+|nuORF', 'ENST00000510336.5_1_5:140021201-140024680:+|nuORF'] 25975 15668 FGCCRDPNIY True PC9_epitope_Rep4 1186.48994973378 1186.4888499358601 68.194 2 -1.4909903062075789 0.4168363333487576 1.0 ['ENSG00000204595|ENST00000376650|DPRX'] 74196 6374 NEFEWEDDLPK True H1975_Epitope_Rep3 1420.61467513924 1420.6135699358601 29.501 2 -1.4909908939469338 0.4168363333487576 1.0 ['ENST00000560458.5_1_15:59970098-59981480:-|nuORF', 'BNIP2|p.V285Afs*12|1|0.19|ENSG00000140299|chr15:59668931-59668931|A/-|frameshift_variant', 'ENSG00000140299|ENST00000607373|BNIP2', 'nc|ENSG00000140299|Q12982-2|BNIP2'] 113121 8163 TLPDGSRLQL True H1975_Epitope_Rep2 1098.6033226099 1098.6022299358601 36.349 2 -1.4909968171993053 0.4168363333487576 1.0 ['ENSG00000124827|ENST00000379491|GCM2'] 64657 10076 LPVDGRPLP True NCI_RA007_Epitope_Rep3 962.5549158654999 962.55380993586 46.727 2 -1.4910030571879485 0.4168363333487576 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 59931 8933 LGGQGHGG True H1975_Epitope_Rep1 681.3194366274099 681.3188849679301 39.266 1 -1.4912319493348372 0.4168575196058019 1.0 ['ENST00000470306.5_1_1:156126086-156128580:+|nuORF'] 97212 4505 SDYSFSVIAMS True NCI_RA007_Epitope_Rep1 1205.52744035797 1205.52634993586 21.627 2 -1.4912913663246452 0.4168575196058019 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 7524 20499 ASDQLLPGV True PC9_epitope_Rep3 898.4759968384599 898.47488993586 84.11 2 -1.4912995366675215 0.4168575196058019 1.0 ['ENST00000569830.1_1_15:42840055-42840904:-|nuORF'] 73963 3673 NCPSFALH True PC9_epitope_Rep1 887.3959726959499 887.39486993586 19.047 2 -1.4913085570781992 0.4168575196058019 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 9496 8934 AVVTGIKK True NCI_RA007_Epitope_Rep2 814.5276384885 814.52708496793 39.376 1 -1.4913216635088211 0.4168575196058019 1.0 ['ENSG00000151881|ENST00000397080|TMEM267'] 64219 7182 LPGTDPQDAER True PC9_epitope_Rep1 1197.56257999673 1197.56092490379 32.436 3 -1.4913371663296502 0.4168575196058019 1.0 ['ENSG00000126062|ENST00000266025|TMEM115'] 58262 9650 LELQRLYSEHS True H1975_Epitope_Rep1 1373.6939285194499 1373.6928299358601 42.047 2 -1.4913391590682896 0.4168575196058019 1.0 ['ENST00000369151.7_1_10:120445489-120445597:-|nuORF'] 57101 8243 LDSSFRNEI True NCI_RA007_Epitope_Rep3 1079.52473793603 1079.52364993586 39.557 2 -1.491433262162991 0.4168575196058019 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 29590 25778 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 106.68 3 -1.4914398814319973 0.4168575196058019 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 87020 28054 QMREFLEQLP True H1975_Epitope_Rep2 1289.6438075228898 1289.64217490379 116.93 3 -1.4914597332445327 0.4168575196058019 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1', 'ENST00000469020.5_1_14:45679581-45687560:-|nuORF'] 70884 21451 LYEEYTRTF True PC9_epitope_Rep3 1220.5713537752802 1220.5702499358601 87.802 2 -1.4915160520335957 0.4168642646463478 1.0 ['PIK3R2|p.S471F|1|0.16|ENSG00000105647|chr19:18163384-18163384|C/T|missense_variant'] 130720 13951 VSVNTWTP True PC9_epitope_Rep6 902.44978209062 902.44868993586 65.514 2 -1.4915569181083577 0.41687100953085965 1.0 ['ENST00000244051.2_1_20:49576777-49576906:+|nuORF'] 15150 7733 EAAERSRAEAL True NCI_RA007_Epitope_Rep1 1201.6051135150499 1201.6040099358602 34.073 2 -1.4916704255095048 0.4168893207027771 1.0 ['ENSG00000105617|ENST00000222224|LENG1'] 83654 8490 PVEETVFYPSP True NCI_RA007_Epitope_Rep2 1263.60231955039 1263.6012299358601 37.667 2 -1.4916824556664068 0.4168979875086745 1.0 ['nc|ENSG00000175193|Q9H300-2|PARL', 'ENSG00000175193|ENST00000317096|PARL'] 34194 20887 GNIIALYVF True PC9_epitope_Rep6 1008.5644179200399 1008.56332993586 93.115 2 -1.4917166000195192 0.4168979875086745 1.0 ['ENSG00000171659|ENST00000378142|GPR34'] 16598 5908 EENIIDNP True H1975_Epitope_Rep3 942.42944056886 942.4288949679301 27.735 1 -1.491717495709289 0.4168979875086745 1.0 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 96952 7987 SAVVPLASVS True PC9_epitope_Rep4 928.52294703088 928.52184993586 38.169 2 -1.4917911635455436 0.41691629752142584 1.0 ['ENSG00000131482|ENST00000253801|G6PC1'] 124460 20768 VGVLQAAE True PC9_epitope_Rep4 785.4283183700499 785.4277649679301 88.039 1 -1.491872243655735 0.41692304133607827 1.0 ['ENSG00000143858|ENST00000367268|SYT2'] 83115 5421 PSPSPTERAP True H1975_Epitope_Rep2 1037.5141732523298 1037.5130699358601 25.879 2 -1.491933799103712 0.4169529162763263 1.0 ['nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-13|PML', 'nc|ENSG00000140464|P29590-11|PML'] 130705 12374 VSVFPGARLL True NCI_RA007_Epitope_Rep4 1057.6284151589298 1057.62730993586 54.593 2 -1.4919686190369001 0.4169548372173712 1.0 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 112713 15113 TLGQIYYLKRF True PC9_epitope_Rep6 1400.7816213250396 1400.7799649037902 70.191 3 -1.4919741816571508 0.4169548372173712 1.0 ['ENST00000543425.1_1_12:124075023-124081273:+|nuORF', 'ENSG00000086598|ENST00000262225|TMED2'] 105542 2945 SSCCNPCC True NCI_RA007_Epitope_Rep1 815.20705192107 815.2065049679301 15.3 1 -1.4920022360456775 0.4169615802743275 1.0 ['ENSG00000241598|ENST00000399682|KRTAP5-4', 'nc|ENSG00000241598|Q6L8H1|KRTAP5-4', 'ENSG00000244411|ENST00000398536|KRTAP5-7', 'ENSG00000204572|ENST00000398531|KRTAP5-10'] 3598 9206 AGNQEARLPR True H1975_Epitope_Rep3 1110.5894038812598 1110.58830993586 40.404 2 -1.492109320657839 0.41697988828107835 1.0 ['ENST00000372025.4_1_1:46153084-46153189:+|nuORF'] 19523 13198 ELPMVTTIQVM True PC9_epitope_Rep4 1260.64578166884 1260.64414490379 58.666 3 -1.492255985627545 0.41701650302420523 1.0 ['nc|ENSG00000068079|P80217-2|IFI35', 'ENST00000246911.6_1_17:41158964-41165399:+|nuORF'] 32252 10584 GFAFAWKCL True PC9_epitope_Rep4 1041.51060852537 1041.50950993586 48.452 2 -1.4922839698106054 0.41701650302420523 1.0 ['MYH9-ORAOV1|1|fusion', 'ENSG00000149716|ENST00000279147|LTO1', 'ENST00000569105.5_1_11:69468929-69488043:-|nuORF'] 73978 21930 NCWKKVVVK True PC9_epitope_Rep6 1102.6321206403798 1102.6310299358602 97.26 2 -1.4923124739757638 0.41703480976061064 1.0 ['ENST00000427738.7_1_16:50784102-50785617:+|nuORF'] 80730 13815 PHEGSFGF True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 59.815 2 -1.492406778723256 0.41704155150281597 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 28677 22725 FSPELLVLY True PC9_epitope_Rep4 1079.5902983147098 1079.58920993586 95.632 2 -1.4925297165412086 0.4170434702161368 1.0 ['ENST00000603679.1_1_1:101203653-101203836:+|nuORF', 'nc|ENSG00000162692|P19320-2|VCAM1', 'nc|ENSG00000162692|P19320-3|VCAM1', 'ENSG00000162692|ENST00000294728|VCAM1'] 27628 11499 FPATGSSY True H1975_Epitope_Rep2 828.3653837603199 828.36483496793 49.288 1 -1.4925827083404812 0.4170434702161368 1.0 ['ENST00000320241.4_1_16:86613413-86613659:+|nuORF'] 113697 12433 TLYLFNWIWRY True NCI_RA007_Epitope_Rep2 1573.80817042605 1573.80706993586 52.971 2 -1.4927212905013905 0.41708008094825094 1.0 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 48330 20725 IYSFAITLWQM True PC9_epitope_Rep2 1371.6896950861499 1371.6885899358601 85.156 2 -1.4927940735101057 0.41708008094825094 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 81300 17737 PLAFLTSNPGH True PC9_epitope_Rep1 1152.5927579262 1152.59110490379 73.024 3 -1.4928442263286392 0.4170819986817304 1.0 ['ENSG00000156299|ENST00000541036|TIAM1', 'nc|ENSG00000156299|Q13009-2|TIAM1'] 2602 8252 AERMVSMAWL True H1975_Epitope_Rep1 1192.5732854349199 1192.57218993586 36.681 2 -1.492856068115687 0.4170819986817304 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 80087 9318 PFLLSLAG True H1975_Epitope_Rep1 816.47454028648 816.47344993586 40.748 2 -1.4928992488787367 0.41710030296722866 1.0 ['ENST00000579192.5_1_17:8198292-8198649:-|nuORF'] 78107 12334 NWDPETVGM True PC9_epitope_Rep5 1047.43314605031 1047.43204993586 52.436 2 -1.492902636094834 0.4171070433284381 1.0 ['ENSG00000091664|ENST00000263160|SLC17A6'] 127062 5563 VLSSIETGV True PC9_epitope_Rep1 903.49131254943 903.49020993586 26.228 2 -1.4929521873384526 0.4171089603496722 1.0 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 28226 21000 FRICNLTRP True PC9_epitope_Rep6 1118.60188314126 1118.6007899358601 93.601 2 -1.493039140369615 0.4171089603496722 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 85357 7514 QETRHGQSP True H1975_Epitope_Rep1 1038.4842701063799 1038.4831699358601 33.902 2 -1.493067871539278 0.41712726347679285 1.0 ['NEK5|p.P398Q|1|0.32|ENSG00000197168|chr13:52093069-52093069|G/T|missense_variant'] 139756 15237 YPEAAAAS True H1975_Epitope_Rep2 778.3497336961799 778.34862993586 63.767 2 -1.4931623004499466 0.41712917996392396 1.0 ['ENST00000264554.10_1_19:416804-417233:-|nuORF'] 63727 11787 LNDKLRLTQNY True H1975_Epitope_Rep1 1376.7412130650398 1376.7401099358601 50.331 2 -1.4931885086238632 0.41712917996392396 1.0 ['nc|ENSG00000175505|Q9UBD9-2|CLCF1', 'ENSG00000175505|ENST00000312438|CLCF1'] 67886 13505 LTATSIDRL True PC9_epitope_Rep1 988.55530978832 988.55420993586 56.802 2 -1.4931893393080895 0.417131096362417 1.0 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 88423 21962 QSPLSHDLI True PC9_epitope_Rep3 1008.5240096600401 1008.52290993586 89.778 2 -1.4932422306409208 0.417131096362417 1.0 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1'] 33192 16970 GIYRDEYQRTW True H1975_Epitope_Rep3 1485.7000765290497 1485.69896993586 70.865 2 -1.4933106293551055 0.41713301267227826 1.0 ['ENSG00000214827|ENST00000369476|MTCP1'] 95117 3123 RVEFHEPETWW True NCI_RA007_Epitope_Rep2 1514.6942628726197 1514.69260490379 16.772 3 -1.4933142048783026 0.41713301267227826 1.0 ['nc|ENSG00000244754|Q92802-3|N4BP2L2', 'nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 142218 3981 YWGPPFLQ True H1975_Epitope_Rep1 1006.4912529797798 1006.49014993586 20.111 2 -1.4934874629043398 0.41714649092380623 1.0 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'PIGT|p.W189Lfs*8|1|0.22|ENSG00000124155|chr20:45419360-45419361|-/C|frameshift_variant'] 33200 12397 GIYTGLSAGL True PC9_epitope_Rep4 950.50729696674 950.50618993586 55.49 2 -1.4935000209739635 0.41714649092380623 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11'] 124007 5978 VGSFEHNL True PC9_epitope_Rep4 901.4293809992099 901.42828993586 29.941 2 -1.493581445767935 0.4171647917124325 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1'] 110725 12564 TGFRWTHDSKY True H1975_Epitope_Rep1 1396.6523980606398 1396.6513099358601 53.372 2 -1.4936668979230685 0.4171715303149424 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 36805 3883 GVLDWKLDFHW True NCI_RA007_Epitope_Rep5 1414.70337100434 1414.7022699358602 21.213 2 -1.4936838784378093 0.4171782687616339 1.0 ['GALNT15|p.L434*|1|0.2|ENSG00000131386|chr3:16212669-16212669|C/-|frameshift_variant', 'ENSG00000131386|ENST00000339732|GALNT15'] 28697 8466 FSRCWEFLLWM True PC9_epitope_Rep4 1516.6995485771997 1516.69789490379 40.034 3 -1.4937912627860748 0.41718018382565464 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'ENST00000416953.2_1_12:133210721-133212582:-|nuORF'] 56890 7703 LDPVLFTRP True H1975_Epitope_Rep1 1056.59678067748 1056.59568993586 34.592 2 -1.4938198118222972 0.41718018382565464 1.0 ['EXT1|p.K730Tfs*15|1|0.1|ENSG00000182197|chr8:117799764-117799765|-/G|frameshift_variant'] 15981 8096 EDRFVRWTQA True H1975_Epitope_Rep1 1306.64183337694 1306.64072993586 36.086 2 -1.493879999537181 0.41718692193858675 1.0 ['ENST00000323688.10_1_11:17298296-17304373:+|nuORF', 'ENST00000531172.5_2_11:17298296-17304356:+|nuORF'] 136654 10534 WWRRRWTRSQW True NCI_RA007_Epitope_Rep1 1702.8705449554998 1702.86889490379 44.959 3 -1.4939040700621506 0.41720522099032337 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 46470 7422 ISVDVRRR True NCI_RA007_Epitope_Rep5 999.59376098571 999.59266993586 35.227 2 -1.4939829246410024 0.4172071353426051 1.0 ['ENSG00000161956|ENST00000321337|SENP3'] 67356 10946 LSSHLAKV True PC9_epitope_Rep2 853.5021520166499 853.50104993586 47.424 2 -1.4940060383499845 0.4172071353426051 1.0 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 60630 17274 LHISSSLVP True H1975_Epitope_Rep1 951.53893144819 951.53838496793 71.906 1 -1.4943257168560387 0.41725529184633703 1.0 ['nc|ENSG00000008118|Q96NX5-2|CAMK1G', 'ENSG00000008118|ENST00000361322|CAMK1G'] 6052 20711 APLKLHTH True PC9_epitope_Rep4 915.52903547083 915.52792993586 87.828 2 -1.494447818014308 0.41725529184633703 1.0 ['ENST00000510726.1_3_3:141145004-141146592:+|nuORF'] 12005 7186 DHSASKEDYM True H1975_Epitope_Rep3 1181.46590273057 1181.46480993586 32.616 2 -1.4945806947105083 0.4173198307553583 1.0 ['ENSG00000100982|ENST00000372409|PCIF1'] 5242 17361 ALPIRHAP True PC9_epitope_Rep6 873.51847078713 873.51736993586 79.395 2 -1.494653186977613 0.41733521374239935 1.0 ['ENST00000522398.5_1_8:67687459-67690210:+|nuORF'] 91222 22615 RGEDDYNMDE True H1975_Epitope_Rep2 1242.44589556198 1242.4442549037901 93.431 3 -1.4947176454828703 0.41733521374239935 1.0 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 95637 13027 RYDEGTLFS True H1975_Epitope_Rep3 1086.4981888350198 1086.49708993586 55.345 2 -1.4947276651521255 0.41733521374239935 1.0 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS'] 79604 19918 PDKVKKKY True NCI_RA007_Epitope_Rep5 1004.6018660579198 1004.60076993586 83.528 2 -1.4947359210085154 0.41733521374239935 1.0 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 98705 18659 SGGCRHRG True H1975_Epitope_Rep2 828.37730294004 828.37620993586 77.441 2 -1.495124687677599 0.4174180422619873 1.0 ['ENST00000581882.5_1_17:61906863-61906914:+|nuORF'] 12290 20954 DILYFLLRV True PC9_epitope_Rep1 1150.6750309981799 1150.67392993586 85.423 2 -1.4951433254896507 0.4174180422619873 1.0 ['ENSG00000187554|ENST00000642603|TLR5', 'TLR5|p.H449N|1|0.27|ENSG00000187554|chr1:223111687-223111687|G/T|missense_variant'] 125309 8570 VINVIRVTI True NCI_RA007_Epitope_Rep2 1025.6597152872098 1025.65860993586 37.979 2 -1.4952255715211573 0.4174613632948411 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 65417 20185 LRFFLEYQ True PC9_epitope_Rep5 1114.5811306133398 1114.58057496793 82.691 1 -1.4952370904915908 0.4174613632948411 1.0 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 120184 21150 VEAPPRRRL True PC9_epitope_Rep5 1092.651610215 1092.65050993586 86.407 2 -1.495246633181709 0.4174613632948411 1.0 ['ENST00000467719.5_1_11:2937762-2940985:+|nuORF'] 6700 8526 AQAHTSAPTPA True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 37.633 2 -1.4953329597877794 0.4174863893287714 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 56732 14614 LDLGAQRERWE True NCI_RA007_Epitope_Rep3 1371.6895118453497 1371.6884099358601 64.83 2 -1.4953347514288737 0.4174863893287714 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 122721 13789 VGGHTSLA True NCI_RA007_Epitope_Rep3 740.3817025308 740.38115496793 61.568 1 -1.4954767176223982 0.4175114142056291 1.0 ['ENSG00000183655|ENST00000337975|KLHL25'] 126383 25073 VLKIKPNRFP True PC9_epitope_Rep5 1210.75501265438 1210.75390993586 101.58 2 -1.4955616928327815 0.4175114142056291 1.0 ['ENST00000503790.6_1_5:49961779-49961854:+|nuORF'] 83729 19142 PVGQLWVELLR True H1975_Epitope_Rep3 1308.7554065772 1308.7543099358602 80.265 2 -1.4957694005210536 0.41754990233359146 1.0 ['nc|ENSG00000083223|Q5VYS8-2|TUT7', 'nc|ENSG00000083223|Q5VYS8-4|TUT7', 'nc|ENSG00000083223|Q5VYS8-6|TUT7', 'ENSG00000083223|ENST00000375963|TUT7'] 12588 13660 DKYRDQYNWFF True PC9_epitope_Rep1 1580.7048275563195 1580.70372993586 57.398 2 -1.4957913378655923 0.41754990233359146 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 41905 9118 IDAQDRVLLLH True H1975_Epitope_Rep3 1291.72483472491 1291.72372993586 40.061 2 -1.4958190848168933 0.41754990233359146 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 123336 20059 VGLRWRPL True PC9_epitope_Rep6 995.6028691174299 995.60176993586 89.824 2 -1.4958198281875754 0.41754990233359146 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 8614 7171 ATYTYDEYKK True NCI_RA007_Epitope_Rep2 1280.5924831426798 1280.5913899358602 32.515 2 -1.4959159281233314 0.41755663430420714 1.0 ['ENSG00000171812|ENST00000397799|COL8A2'] 94242 19484 RRQHLQVHR True NCI_RA007_Epitope_Rep5 1228.7013543720798 1228.70024993586 81.831 2 -1.496042172909971 0.41757009777859966 1.0 ['nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25', 'ENSG00000197037|ENST00000394152|ZSCAN25', 'nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25'] 110929 11331 TGYGQEGK True NCI_RA007_Epitope_Rep2 838.3820964536199 838.38154496793 48.665 1 -1.4960425211523707 0.41757009777859966 1.0 ['ENSG00000079112|ENST00000027335|CDH17', 'CDH17|p.L680Sfs*64|1|0.23|ENSG00000079112|chr8:94146057-94146057|G/-|frameshift_variant'] 109314 13217 TAYCFPALGRA True H1975_Epitope_Rep1 1168.5699143066397 1168.56937496793 55.936 1 -1.4961036689363278 0.4175835606305765 1.0 ['ENST00000412877.1_1_3:184079592-184081026:+|nuORF'] 933 622 ADNKWYFPIH True PC9_epitope_Rep5 1289.61930702721 1289.61766490379 3.4433 3 -1.4961332530285374 0.4175835606305765 1.0 ['ANKS1B|p.G92W|1|0.05|ENSG00000185046|chr12:99812253-99812253|C/A|missense_variant'] 66933 11777 LSNTARLEI True PC9_epitope_Rep3 1015.5662088251898 1015.56510993586 50.318 2 -1.496186786839231 0.4175902918231725 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 122794 21231 VGGPNGGK True PC9_epitope_Rep4 684.35548778296 684.35493496793 89.829 1 -1.496254910414227 0.41759702286018074 1.0 ['ENSG00000111676|ENST00000396684|ATN1', 'ATN1|p.M371Hfs*9|1|0.25|ENSG00000111676|chr12:6936371-6936372|-/C|frameshift_variant'] 15729 16093 ECDDCDSC True PC9_epitope_Rep1 888.1935696015601 888.19246993586 66.718 2 -1.4963674952710606 0.4176056582186319 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 138691 13783 YILYILFKV True NCI_RA007_Epitope_Rep5 1170.7052684973 1170.7041699358601 59.693 2 -1.4963686528448819 0.4176056582186319 1.0 ['nc|ENSG00000166405|Q7Z5B4-2|RIC3'] 116023 16872 TSLRVGRK True NCI_RA007_Epitope_Rep4 915.5613982282699 915.56030993586 73.112 2 -1.4963904756779034 0.4176056582186319 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 9334 12710 AVREDFKDLKP True NCI_RA007_Epitope_Rep4 1316.7088503075997 1316.7077499358602 55.943 2 -1.4964616398127126 0.41763550213798684 1.0 ['ENSG00000179632|ENST00000322428|MAF1'] 77489 14815 NTDAEGRLIL True PC9_epitope_Rep1 1100.5825871653199 1100.5814899358602 61.806 2 -1.496573706393174 0.41766051865205933 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 125232 14371 VIKCRNEI True PC9_epitope_Rep1 973.5378859023699 973.53678993586 60.103 2 -1.4966133395966523 0.41766051865205933 1.0 ['nc|nan|Q8TB03-2|CXorf38', 'ENSG00000185753|ENST00000327877|CXorf38'] 117732 7652 TVVEGRKI True PC9_epitope_Rep2 900.5392658013599 900.53816993586 34.803 2 -1.4967262212369683 0.4176672483330059 1.0 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000100320|O43251-4|RBFOX2', 'nc|ENSG00000100320|O43251-9|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-4|RBFOX1', 'nc|ENSG00000078328|Q9NWB1-5|RBFOX1', 'nc|ENSG00000078328|Q9NWB1-2|RBFOX1'] 142899 22970 YYVDFFKT True PC9_epitope_Rep2 1081.51204799401 1081.51094993586 93.847 2 -1.4967801157493732 0.41768260975074245 1.0 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 121162 19272 VESCDCHP True PC9_epitope_Rep3 888.31058838948 888.30948993586 79.351 2 -1.4968104308098593 0.41768260975074245 1.0 ['ENST00000439875.1_1_9:115871246-115871747:-|nuORF'] 72077 19570 MEVEQYRRERE True H1975_Epitope_Rep3 1523.7150749701898 1523.7139699358602 81.997 2 -1.496823393898158 0.41768260975074245 1.0 ['ENST00000481998.1_1_6:31513879-31514336:-|nuORF', 'nc|ENSG00000213760|O95670-3|ATP6V1G2', 'ENSG00000213760|ENST00000303892|ATP6V1G2', 'ENST00000475917.1_1_6:31510065-31514336:-|nuORF'] 99664 21968 SIGIEEVF True PC9_epitope_Rep5 892.4541987647199 892.45310993586 89.532 2 -1.4968266634314125 0.41768260975074245 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'HYDIN|p.I1870Kfs*10|1|0.33|ENSG00000157423|chr16:70970523-70970530|TTCTTCTA/-|frameshift_variant', 'HYDIN|p.Q2268Rfs*6|1|0.09|ENSG00000157423|chr16:70941687-70941687|G/-|frameshift_variant', 'HYDIN|p.R2422Gfs*41|1|0.09|ENSG00000157423|chr16:70921112-70921112|T/-|frameshift_variant'] 12410 8322 DITSDITSWEG True NCI_RA007_Epitope_Rep2 1222.5353621893798 1222.53426993586 37.011 2 -1.496978800440727 0.41768451218525754 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 20998 6487 EQRLRRESQ True NCI_RA007_Epitope_Rep2 1200.6323313223998 1200.6312299358601 29.842 2 -1.496981102716395 0.41768451218525754 1.0 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 120490 6202 VEEYQLPYYN True NCI_RA007_Epitope_Rep2 1316.5924831426798 1316.5913899358602 28.732 2 -1.497207315873178 0.41773263539825056 1.0 ['ENSG00000107779|ENST00000372037|BMPR1A'] 68095 10555 LTDNIQDEFF True H1975_Epitope_Rep2 1240.5611830144 1240.56008993586 45.619 2 -1.4972230069011823 0.41773263539825056 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 42157 5804 IDPGSTER True NCI_RA007_Epitope_Rep5 873.41921023833 873.41810993586 29.011 2 -1.4972895645720241 0.41775091862910496 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'CACNA1H|p.T2226Sfs*36|1|0.19|ENSG00000196557|chr16:1220609-1220609|C/-|frameshift_variant', 'ENSG00000196557|ENST00000348261|CACNA1H'] 15583 9954 EAQRQLEQERR True NCI_RA007_Epitope_Rep1 1441.7385872960897 1441.7374899358601 42.723 2 -1.497425222149685 0.41776920143743573 1.0 ['nc|ENSG00000136279|Q9UJU6-6|DBNL', 'ENSG00000136279|ENST00000448521|DBNL', 'nc|ENSG00000136279|Q9UJU6-2|DBNL', 'nc|ENSG00000136279|Q9UJU6-3|DBNL', 'ENST00000449997.1_1_7:44097442-44098349:+|nuORF', 'nc|ENSG00000136279|Q9UJU6-5|DBNL', 'nc|ENSG00000136279|Q9UJU6-4|DBNL'] 125912 24367 VLCPGLHS True H1975_Epitope_Rep1 824.4214591678001 824.42036993586 101.04 2 -1.4976718061071244 0.4178075070183343 1.0 ['ENST00000431992.5_2_1:33789663-33789792:-|nuORF'] 80632 23547 PGSAWDKV True H1975_Epitope_Rep3 858.42356734278 858.42301496793 98.249 1 -1.4977451285812196 0.4178075070183343 1.0 ['ENST00000431285.5_1_3:9439595-9466171:+|nuORF'] 39400 18266 HKPGLKKHPAA True NCI_RA007_Epitope_Rep4 1182.69856040742 1182.69691490379 79.006 3 -1.4977755560664305 0.4178075070183343 1.0 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 33564 20766 GLERYLKEHRY True PC9_epitope_Rep2 1462.7680965192199 1462.76698993586 85.318 2 -1.4977808887736395 0.4178075070183343 1.0 ['nc|ENSG00000165185|Q8N8K9-2|KIAA1958'] 53520 22578 KRKWRSWKVNR True H1975_Epitope_Rep2 1542.9007824546197 1542.89914490379 93.285 3 -1.4978606774216854 0.4178075070183343 1.0 ['nc|ENSG00000078549|P41586-5|ADCYAP1R1', 'nc|ENSG00000078549|P41586-3|ADCYAP1R1', 'ENSG00000078549|ENST00000304166|ADCYAP1R1', 'nc|ENSG00000078549|P41586-4|ADCYAP1R1', 'nc|ENSG00000078549|P41586-2|ADCYAP1R1'] 85494 23921 QFRKKKRE True PC9_epitope_Rep1 1118.6672602791398 1118.6661699358601 96.815 2 -1.4979199188351622 0.4178075070183343 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 59276 9148 LFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep1 980.46371818203 980.46262993586 40.094 2 -1.497952986727269 0.4178075070183343 1.0 ['CON__P02769'] 113607 20719 TLVKMTWYD True PC9_epitope_Rep4 1155.56343194387 1155.56179490379 87.859 3 -1.497961733665532 0.4178075070183343 1.0 ['ENST00000335420.9_1_7:129772789-129772981:+|nuORF'] 95606 19510 RWWWRRRRRHR True PC9_epitope_Rep3 1806.0151925569298 1806.01354490379 80.276 3 -1.497964132653142 0.4178075070183343 1.0 ['ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF', 'ENST00000395136.6_2_1:70687096-70687432:+|nuORF'] 137159 18962 YAVLYTLY True PC9_epitope_Rep3 1004.52188440172 1004.52078993586 78.162 2 -1.4979812058313757 0.4178075070183343 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'ENST00000566127.1_1_16:29552630-29552998:-|nuORF', 'ENST00000523028.5_1_16:21892164-21910369:-|nuORF', 'ENST00000309865.11_1_16:22482951-22501641:+|nuORF'] 116022 16704 TSLRVGRK True NCI_RA007_Epitope_Rep4 915.5613982282699 915.56030993586 72.433 2 -1.4979919909102362 0.4178075070183343 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 124955 21327 VHSTHAPT True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 89.091 2 -1.498013457234621 0.4178075070183343 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 32725 19061 GGWNFGTS True NCI_RA007_Epitope_Rep5 824.3453170220799 824.34420993586 80.182 2 -1.498018197907119 0.4178075070183343 1.0 ['ENSG00000085465|ENST00000369732|OVGP1'] 112077 15632 TITRRRTW True NCI_RA007_Epitope_Rep4 1088.6203100867199 1088.61920993586 67.906 2 -1.4980511121744586 0.4178075070183343 1.0 ['ENST00000502249.6_1_4:119435248-119475252:+|nuORF', 'nc|ENSG00000154608|Q96L14|CEP170P1', 'nc|ENSG00000143702|Q5SW79-3|CEP170', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170'] 76650 16102 NQSDHTST True NCI_RA007_Epitope_Rep4 888.3573382577601 888.35624993586 69.834 2 -1.49805943230362 0.4178075070183343 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 20629 7910 EPVPAYFRP True PC9_epitope_Rep3 1074.54983048506 1074.5487299358601 35.407 2 -1.4980770382875106 0.4178075070183343 1.0 ['ENST00000567562.5_1_16:20814828-20817484:-|nuORF'] 112673 6697 TLFVLFLPFY True PC9_epitope_Rep5 1258.70018311686 1258.69852490379 30.732 3 -1.49809414443842 0.41780940608357114 1.0 ['ENSG00000197309|ENST00000641351|OR10D3'] 82698 2737 PQTMKLTLGH True H1975_Epitope_Rep2 1124.60121443492 1124.59957490379 14.585 3 -1.4981286989416134 0.41780940608357114 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 137361 7119 YDQSQPPYYN True H1975_Epitope_Rep3 1273.5251318588498 1273.5240299358602 32.353 2 -1.4981872404945182 0.41781613178993093 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 71861 15058 MELPLEAPP True H1975_Epitope_Rep3 995.4997690581499 995.49866993586 63.314 2 -1.4982816481350754 0.41784113488286123 1.0 ['ENSG00000068615|ENST00000538924|REEP1'] 85506 17097 QFVEPSRQF True PC9_epitope_Rep6 1136.5614577979197 1136.56036993586 78.337 2 -1.498322891535766 0.41784113488286123 1.0 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 4996 8869 ALHPSETRTL True PC9_epitope_Rep2 1123.59857158263 1123.59746993586 39.468 2 -1.4984568877983915 0.4178439005232578 1.0 ['ENSG00000092470|ENST00000263795|WDR76'] 70745 18276 LWVSEWGHWNR True PC9_epitope_Rep3 1468.7000169593998 1468.69890993586 75.505 2 -1.498464085003401 0.4178439005232578 1.0 ['ENST00000394893.5_1_7:75615553-75615796:+|nuORF'] 29969 26416 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 109.33 3 -1.4985126163413007 0.4178439005232578 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 118590 24801 TYRCIKQVH True PC9_epitope_Rep5 1146.5967977608198 1146.59515490379 100.55 3 -1.498552468429098 0.4178439005232578 1.0 ['ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3'] 3303 11884 AGGAQNDGRAL True H1975_Epitope_Rep1 1028.4999201705198 1028.4988299358602 50.712 2 -1.4985945715883344 0.4178439005232578 1.0 66959 13063 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 58.14 2 -1.498695310000791 0.4178439005232578 1.0 ['ENSG00000198734|ENST00000367797|F5'] 28247 21955 FRKKKREQ True PC9_epitope_Rep6 1118.6672602791398 1118.6661699358601 97.366 2 -1.498706070433343 0.4178439005232578 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 55190 16896 LAATRPRA True NCI_RA007_Epitope_Rep1 854.5086343794198 854.50808496793 69.849 1 -1.4987754851517927 0.4178439005232578 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6', 'DNAH6|p.Q2538H|1|0.59|ENSG00000115423|chr2:84697664-84697664|G/C|missense_variant', 'ENST00000602588.1_2_2:84885442-84924911:+|nuORF'] 30305 15774 GAAHLALLYPV True PC9_epitope_Rep4 1123.63897984263 1123.6373249037902 68.598 3 -1.4987809346835201 0.4178439005232578 1.0 ['SHD|p.E327A|1|0.18|ENSG00000105251|chr19:4290590-4290590|A/C|missense_variant'] 18639 12107 EKVLQDAALTY True H1975_Epitope_Rep2 1249.65541775241 1249.65432993586 51.653 2 -1.4989672781104026 0.41787372652297455 1.0 ['EVPL|p.V745L|1|0.29|ENSG00000167880|chr17:76014566-76014566|C/A|missense_variant'] 48621 3644 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 19.049 3 -1.4990819087383294 0.41787752084825247 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 24191 6661 EYQREGIPW True NCI_RA007_Epitope_Rep1 1176.5563724174797 1176.55526993586 29.921 2 -1.4990928334393696 0.41787752084825247 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 7673 5020 ASKFHNKVR True NCI_RA007_Epitope_Rep1 1085.60941104985 1085.60830993586 23.611 2 -1.499107040404444 0.41787752084825247 1.0 ['ENST00000478930.5_2_7:106815027-106820334:+|nuORF'] 53423 7932 KRAEVGVHR True NCI_RA007_Epitope_Rep4 1050.6046600225798 1050.6035699358602 37.253 2 -1.499178508092907 0.41787752084825247 1.0 ['ENST00000578709.5_1_17:37859640-37864671:+|nuORF'] 38558 24720 HETLLLRR True NCI_RA007_Epitope_Rep5 1036.61416207712 1036.61357496793 102.57 1 -1.4992208562616807 0.4178794178794179 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF'] 56670 14865 LDKERAVL True PC9_epitope_Rep4 942.5498304850598 942.54872993586 65.115 2 -1.499223242229333 0.4178794178794179 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 94739 22896 RSGTGHGD True PC9_epitope_Rep1 785.34162862397 785.3410849679301 92.867 1 -1.4993091805466747 0.41788614130120927 1.0 ['ENST00000413052.6_1_1:113217551-113217650:+|nuORF'] 18290 14490 EIRNLYRQSLQ True PC9_epitope_Rep1 1418.76301113878 1418.7613649037899 60.56 3 -1.4994134069415226 0.41790613885167904 1.0 ['CDH19|p.S680N|1|0.27|ENSG00000071991|chr18:66505092-66505092|C/T|missense_variant'] 122553 3690 VGEWHGGF True PC9_epitope_Rep4 887.3926015676699 887.39150993586 20.324 2 -1.4994768713352467 0.41790613885167904 1.0 ['ENST00000592497.1_1_17:76705671-76778305:-|nuORF', 'ENST00000591095.1_1_17:76705671-76732801:-|nuORF'] 40186 19560 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 81.166 3 -1.4997117047173878 0.41790613885167904 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 127529 10181 VNQGLIRMY True NCI_RA007_Epitope_Rep1 1092.57499968708 1092.57390993586 43.613 2 -1.4997352662598789 0.41790613885167904 1.0 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA', 'ENSG00000235007|ENST00000674648|unknown'] 57029 3624 LDRSDEDK True NCI_RA007_Epitope_Rep2 976.4461532621599 976.44504993586 18.748 2 -1.4997436042119132 0.41790613885167904 1.0 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 140637 10336 YRRYKHFDWLY True H1975_Epitope_Rep1 1645.8153810648098 1645.8142899358602 44.705 2 -1.499760267640316 0.41790613885167904 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 107048 21811 SVFYCKKI True PC9_epitope_Rep4 986.5259242363398 986.52482993586 92.092 2 -1.4997896732594282 0.41790613885167904 1.0 ['ENSG00000127366|ENST00000247883|TAS2R5'] 122166 15184 VGAGTSGG True NCI_RA007_Epitope_Rep5 604.28165413636 604.2811049679301 65.088 1 -1.499872211089068 0.41790613885167904 1.0 ['ENSG00000259330|ENST00000638170|INAFM2'] 30809 5472 GANTTLLITI True H1975_Epitope_Rep2 1015.59136094387 1015.59026993586 26.074 2 -1.4999688961229172 0.41790613885167904 1.0 ['ENSG00000180934|ENST00000641900|OR56A1', 'nc|ENSG00000180934|Q8NGH5|OR56A1', 'OR56A4|p.P150Qfs*10|1|0.37|ENSG00000183389|chr11:6002700-6002700|G/-|frameshift_variant', 'ENSG00000183389|ENST00000641156|OR56A4'] 8342 5937 ATKSDPHSV True PC9_epitope_Rep6 940.4614094034799 940.46030993586 31.128 2 -1.50001639529724 0.41790613885167904 1.0 ['ENST00000325333.9_1_19:56154335-56154581:+|nuORF'] 40677 22631 HRQVDHFFCEV True H1975_Epitope_Rep3 1415.64045347795 1415.63934993586 94.584 2 -1.5000733540748867 0.41790613885167904 1.0 ['nc|ENSG00000204701|O76001|OR2J3', 'ENSG00000204701|ENST00000641151|OR2J3'] 112853 7534 TLKEAALA True PC9_epitope_Rep5 815.4752685624699 815.47416993586 33.927 2 -1.5001148515196308 0.41790613885167904 1.0 ['ENST00000416179.1_1_21:43916935-43917360:+|nuORF'] 92198 24950 RLHLLLLILL True PC9_epitope_Rep3 1215.84309938279 1215.8414549037902 101.33 3 -1.5001441441839467 0.41790613885167904 1.0 ['nc|ENSG00000206034|Q30KR1|DEFB109B'] 79412 9728 PATLRAAPL True NCI_RA007_Epitope_Rep4 908.5443511817998 908.54324993586 44.264 2 -1.5002753115661187 0.41790613885167904 1.0 ['ENST00000592889.1_2_19:36230484-36231968:-|nuORF', 'ENST00000588992.5_2_19:36230484-36231989:-|nuORF'] 72588 27050 MLRLHQGH True PC9_epitope_Rep2 990.5181535173001 990.51704993586 111.43 2 -1.50032264258292 0.41790613885167904 1.0 ['ENST00000255078.7_1_11:68707211-68707535:+|nuORF'] 36684 8832 GVIQRLTL True PC9_epitope_Rep6 898.5600012459399 898.55890993586 43.9 2 -1.500359943274511 0.4179128607226578 1.0 ['ENSG00000090432|ENST00000264198|MUL1'] 32520 23445 GGFYTCSD True NCI_RA007_Epitope_Rep3 848.3010692515999 848.29996993586 101.76 2 -1.5005380845382925 0.41791665223265323 1.0 ['ENSG00000001036|ENST00000002165|FUCA2', 'FUCA2|p.R280H|1|0.04|ENSG00000001036|chr6:143502479-143502479|C/T|missense_variant'] 11583 11895 DGASRSSH True H1975_Epitope_Rep2 815.35219330767 815.35164496793 50.834 1 -1.5005682312779802 0.41791665223265323 1.0 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1', 'nc|ENSG00000177910|B4DYI2|SPATA31C2'] 92429 24677 RLRFHGPG True PC9_epitope_Rep4 938.5198677694598 938.51876993586 103.41 2 -1.5006066437840146 0.41791665223265323 1.0 ['ENST00000541086.5_1_14:103389974-103397014:+|nuORF', 'ENSG00000166126|ENST00000299155|AMN', 'ENST00000558590.1_1_14:103395319-103397951:+|nuORF'] 63319 12693 LLSWGPTA True PC9_epitope_Rep6 843.4490538146299 843.44794993586 60.301 2 -1.5006129619752466 0.41791665223265323 1.0 ['ENST00000283921.4_1_7:27211115-27211478:-|nuORF'] 127437 9448 VNGLQPLPA True H1975_Epitope_Rep1 907.5127167003499 907.51160993586 41.257 2 -1.5006576276062102 0.41791854785630983 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000373148.5_1_1:36643158-36645856:+|nuORF'] 122723 20712 VGGHTSLA True PC9_epitope_Rep2 740.3817025308 740.38115496793 85.104 1 -1.5006780657442176 0.41791854785630983 1.0 ['ENSG00000183655|ENST00000337975|KLHL25'] 31208 18784 GCGGRGSK True PC9_epitope_Rep4 720.33370679256 720.33315496793 80.337 1 -1.5007380864129485 0.41792044339241385 1.0 ['ENSG00000185950|ENST00000375856|IRS2'] 85554 9349 QGEPQLPQAVQ True NCI_RA007_Epitope_Rep3 1193.6040508858898 1193.6029499358601 43.867 2 -1.5007561627261836 0.41792044339241385 1.0 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 4428 9968 AIQVVENK True H1975_Epitope_Rep1 899.5076313199099 899.50652993586 43.278 2 -1.5008226602757444 0.4179271643996952 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 55435 22754 LAFFRFPR True PC9_epitope_Rep5 1052.5919700805598 1052.59137496793 92.523 1 -1.5008561380924144 0.41793284995150787 1.0 ['ENSG00000137492|ENST00000260045|THAP12', 'nc|ENSG00000137492|O43422-2|THAP12'] 36720 15709 GVKAQAAA True NCI_RA007_Epitope_Rep3 714.4024379753798 714.4018849679301 69.431 1 -1.5009113116103743 0.41793284995150787 1.0 ['ENST00000318560.5_1_9:133710506-133710713:+|nuORF'] 22395 9423 ETEFKELDGLR True H1975_Epitope_Rep1 1335.6670450652698 1335.66594993586 41.158 2 -1.5009550980754178 0.41793284995150787 1.0 ['ENSG00000179071|ENST00000316398|CCDC89'] 124830 17125 VHIHHGIL True PC9_epitope_Rep4 924.529369824 924.52826993586 73.873 2 -1.5009915194792076 0.41793284995150787 1.0 ['L1PA10_dup6827|chr20:45687017-45687860:-|1.2261576937641354|0.4932040244898218|1.31|536.0|7|1|sense'] 20189 4859 ENHETVAYEFM True NCI_RA007_Epitope_Rep2 1368.5656167718396 1368.56450993586 23.525 2 -1.501021498741981 0.41793284995150787 1.0 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 127318 17718 VMGSVSSL True H1975_Epitope_Rep1 778.38949033318 778.38838993586 73.744 2 -1.5010369423869332 0.41793284995150787 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF', 'ENSG00000107816|ENST00000454422|LZTS2'] 87109 4766 QNSEPNAPL True PC9_epitope_Rep5 968.4563240230399 968.45522993586 23.379 2 -1.5011441994396475 0.41793957027236095 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 81962 13147 PLTKGIFR True PC9_epitope_Rep3 930.56508662638 930.56398993586 55.601 2 -1.501159570727852 0.41794629043803544 1.0 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20', 'ARHGAP20|p.S401L|1|0.13|ENSG00000137727|chr11:110590751-110590751|G/A|missense_variant'] 117461 4364 TVQSLNNHL True NCI_RA007_Epitope_Rep5 1024.53015766964 1024.5290699358602 23.4 2 -1.5012182666648624 0.4179645557928765 1.0 ['ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 115317 24761 TRHRKFKE True NCI_RA007_Epitope_Rep5 1100.6203100867199 1100.61920993586 102.73 2 -1.501269594180252 0.4179712755149164 1.0 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 27413 9750 FLWMLKDFK True PC9_epitope_Rep4 1226.6521873786198 1226.65054490379 45.141 3 -1.5013427729931026 0.417989540159553 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B'] 77366 12714 NSELLRHERIH True NCI_RA007_Epitope_Rep1 1402.7429444005402 1402.74184993586 53.438 2 -1.5013588073535453 0.417991433750101 1.0 ['ENSG00000180787|ENST00000318833|ZFP3'] 122537 7088 VGESRSIAV True PC9_epitope_Rep6 916.4977949121999 916.49668993586 36.301 2 -1.5013633309116379 0.417991433750101 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant'] 123366 15248 VGMFLLLL True PC9_epitope_Rep4 904.5455970517598 904.54504496793 66.58 1 -1.5013735880965506 0.4179933272532065 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 120058 16842 VDSVLVKL True NCI_RA007_Epitope_Rep5 871.5378688190299 871.53676993586 71.532 2 -1.5014030498481141 0.4179933272532065 1.0 ['nc|ENSG00000126107|Q5T447-2|HECTD3', 'ENSG00000126107|ENST00000372172|HECTD3'] 81356 23734 PLCPHGPT True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 98.636 2 -1.5014733036635264 0.4180000461776454 1.0 ['ENST00000505451.5_1_4:25314431-25353701:+|nuORF', 'nc|ENSG00000168228|Q9H5U6-3|ZCCHC4', 'ENSG00000168228|ENST00000302874|ZCCHC4', 'nc|ENSG00000168228|Q9H5U6-2|ZCCHC4'] 33950 11293 GLSEPRQLY True PC9_epitope_Rep1 1061.55055876105 1061.54946993586 48.318 2 -1.5016306307006844 0.41800676494695405 1.0 ['ZNF536|p.S450R|1|0.26|ENSG00000198597|chr19:30444912-30444912|C/A|missense_variant'] 27168 20883 FLLFLAIYLF True PC9_epitope_Rep1 1258.7365686255796 1258.73546993586 85.146 2 -1.5016687336252492 0.418008658008658 1.0 ['OR5T1|p.R315Dfs*4|1|0.29|ENSG00000181698|chr11:56276578-56276578|A/-|frameshift_variant', 'ENSG00000181698|ENST00000641665|OR5T1'] 74071 10550 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 45.6 1 -1.5016741798978317 0.418008658008658 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 78087 6788 NVVQRVVA True PC9_epitope_Rep4 883.5239500903898 883.52284993586 33.314 2 -1.501816066627045 0.4180403564667313 1.0 ['ENSG00000214456|ENST00000381848|PLIN5', 'ENST00000586020.1_1_19:4529720-4540017:-|nuORF'] 113921 12088 TNRTTNEI True PC9_epitope_Rep1 947.46722305991 947.46612993586 51.356 2 -1.5018375605435312 0.4180403564667313 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 124597 14789 VGVTVVVA True H1975_Epitope_Rep1 742.4588902223398 742.4583449679301 62.11 1 -1.501857516447769 0.4180403564667313 1.0 ['ENST00000473093.1_1_3:135915044-135915128:-|nuORF'] 61049 11177 LIGADGHNSG True PC9_epitope_Rep4 939.44100831207 939.43990993586 50.772 2 -1.5020467402146076 0.4180470743053712 1.0 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 19977 6473 ELWKNDLS True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 30.313 2 -1.5021497282162193 0.4180768786794413 1.0 ['ENST00000392244.7_1_2:203071532-203071586:-|nuORF'] 24192 6467 EYQREGIPW True NCI_RA007_Epitope_Rep2 1176.5563724174797 1176.55526993586 29.764 2 -1.5021886287706696 0.41808066117228804 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 26631 6582 FINRDLAHDS True NCI_RA007_Epitope_Rep5 1186.5730851107799 1186.57144490379 31.979 3 -1.5021920141684666 0.41808066117228804 1.0 ['ENST00000460438.5_1_7:13998579-14028701:-|nuORF', 'ENST00000483075.1_1_7:14014577-14028701:-|nuORF', 'nc|ENSG00000006468|P50549-3|ETV1', 'nc|ENSG00000006468|P50549-2|ETV1', 'ENSG00000006468|ENST00000430479|ETV1'] 40350 24878 HQRFESRMS True PC9_epitope_Rep3 1176.54582481712 1176.54418490379 101.07 3 -1.5022077800195086 0.41808066117228804 1.0 ['MYO1B|p.H488R|1|0.18|ENSG00000128641|chr2:191385993-191385993|A/G|missense_variant'] 3358 9881 AGGSGSGS True H1975_Epitope_Rep3 578.2296185635 578.22907496793 43.038 1 -1.5022082464908337 0.41808066117228804 1.0 ['ENSG00000130307|ENST00000252597|USHBP1', 'USHBP1|p.S245R|1|0.34|ENSG00000130307|chr19:17259930-17259930|G/T|missense_variant', 'ENST00000513237.5_1_4:106067634-106067973:+|nuORF'] 62251 10218 LLFGPREL True PC9_epitope_Rep5 943.5491022090699 943.54800993586 44.291 2 -1.5022597506261262 0.4180823561997969 1.0 ['ENST00000398073.6_1_12:58213863-58214004:-|nuORF'] 8166 20620 ATERYLHVRP True H1975_Epitope_Rep2 1240.66765420196 1240.66654993586 85.408 2 -1.5024458689426776 0.4180823561997969 1.0 ['nc|ENSG00000092098|Q96EP0-2|RNF31', 'nc|ENSG00000092098|Q96EP0-3|RNF31', 'ENSG00000092098|ENST00000324103|RNF31', 'ENST00000559491.1_1_14:24629014-24629779:+|nuORF'] 84503 7326 QAMDHAPG True H1975_Epitope_Rep3 825.3439371230899 825.3433849679301 33.154 1 -1.5024502825145938 0.4180823561997969 1.0 ['ENST00000502262.4_1_5:96158677-96209374:-|nuORF'] 142213 4440 YWEKFFQQRGK True NCI_RA007_Epitope_Rep4 1515.7622828627898 1515.76063490379 23.446 3 -1.5024644373517566 0.4180823561997969 1.0 ['nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13', 'nc|ENSG00000010165|Q8N6R0-1|METTL13'] 36916 23831 GVLQKGGP True NCI_RA007_Epitope_Rep1 754.4337381036598 754.4331849679301 98.545 1 -1.5024650399436834 0.4180823561997969 1.0 ['ENST00000303991.4_1_5:176025423-176025792:-|nuORF'] 130011 6284 VSAELLGLP True H1975_Epitope_Rep3 897.5171333744499 897.51602993586 29.176 2 -1.5025205097755079 0.4180823561997969 1.0 ['ENST00000574767.5_1_17:78519031-78519253:+|nuORF'] 32652 8639 GGPEVTYEPPP True PC9_epitope_Rep1 1141.52915461013 1141.52804993586 38.068 2 -1.5025328563223905 0.4180823561997969 1.0 ['ENSG00000114739|ENST00000352511|ACVR2B', 'ENST00000465020.5_1_3:38495813-38519975:+|nuORF'] 27514 22108 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 92.168 2 -1.5025444656874327 0.4180823561997969 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 20494 19768 EPLRPFLAP True PC9_epitope_Rep3 1038.58621599378 1038.5851099358601 81.266 2 -1.502575634549144 0.4180823561997969 1.0 ['nc|ENSG00000128276|O75679-2|RFPL3', 'ENSG00000128276|ENST00000249007|RFPL3', 'nc|ENSG00000128253|O75678-3|RFPL2', 'ENSG00000128253|ENST00000652607|RFPL2'] 86443 20589 QKLFIRHITTK True H1975_Epitope_Rep2 1383.83505388023 1383.83341490379 85.287 3 -1.5026252406571188 0.4180823561997969 1.0 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1'] 84713 5973 QDNWLRTNWVY True H1975_Epitope_Rep1 1493.70516190949 1493.7040699358602 28.046 2 -1.5026473842211991 0.4180823561997969 1.0 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant', 'nc|ENSG00000142627|P29317-2|EPHA2'] 36919 23786 GVLQKGGP True NCI_RA007_Epitope_Rep5 754.4337381036598 754.4331849679301 98.845 1 -1.5026660692181466 0.4180823561997969 1.0 ['ENST00000303991.4_1_5:176025423-176025792:-|nuORF'] 128696 9736 VPVVLGPS True H1975_Epitope_Rep2 766.45889022234 766.45778993586 42.436 2 -1.5026816630567055 0.4180823561997969 1.0 ['ENSG00000130383|ENST00000588525|FUT5', 'ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6', 'ENSG00000172461|ENST00000302103|FUT9'] 59948 20646 LGGTDLEKH True PC9_epitope_Rep5 968.49270953176 968.49160993586 84.468 2 -1.50270045411558 0.4180823561997969 1.0 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3'] 3148 9474 AGDFRTHPFFF True NCI_RA007_Epitope_Rep4 1340.6302060640794 1340.62855490379 43.298 3 -1.5027089209149311 0.41809096259708484 1.0 ['nc|ENSG00000104936|Q09013-12|DMPK', 'nc|ENSG00000104936|Q09013-10|DMPK', 'nc|ENSG00000104936|Q09013-11|DMPK', 'nc|ENSG00000104936|Q09013-15|DMPK', 'ENSG00000104936|ENST00000291270|DMPK', 'nc|ENSG00000104936|Q09013-16|DMPK', 'nc|ENSG00000104936|Q09013-2|DMPK', 'nc|ENSG00000104936|Q09013-8|DMPK', 'ENST00000596686.5_1_19:46273741-46282867:-|nuORF', 'nc|ENSG00000104936|Q09013-5|DMPK', 'nc|ENSG00000104936|Q09013-7|DMPK', 'nc|ENSG00000104936|Q09013-6|DMPK', 'nc|ENSG00000104936|Q09013-1|DMPK'] 48602 25405 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 104.33 3 -1.5027237371897493 0.41809096259708484 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 62437 7481 LLHLLCRQK True NCI_RA007_Epitope_Rep4 1122.66956877826 1122.6679349037902 35.421 3 -1.5027250470993943 0.41809096259708484 1.0 ['ENST00000443526.5_1_7:99950215-99952796:+|nuORF'] 95645 11403 RYELLQEP True H1975_Epitope_Rep2 1046.53965972418 1046.53856993586 48.911 2 -1.5027382527303406 0.41809474352316656 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 36220 7500 GVCTRIFC True PC9_epitope_Rep1 897.4200792688099 897.4189899358599 33.666 2 -1.5027682409002716 0.41809474352316656 1.0 ['FBXW10|p.G492C|1|0.15|ENSG00000171931|chr17:18764782-18764782|G/T|missense_variant'] 25456 14193 FEEKHRRDF True NCI_RA007_Epitope_Rep1 1262.6156186290998 1262.6145299358602 59.244 2 -1.502780899568662 0.41809474352316656 1.0 ['ENST00000396060.6_1_15:59931232-59931334:-|nuORF'] 74459 10844 NEVPPQPDP True H1975_Epitope_Rep2 991.46107505031 991.46052496793 46.741 1 -1.5028046472280276 0.41809474352316656 1.0 ['ENSG00000167565|ENST00000322354|SERTAD3'] 135555 18666 WKSCRGGGRRR True NCI_RA007_Epitope_Rep3 1317.6948890926496 1317.69325490379 81.66 3 -1.5029007805978662 0.41809663385531465 1.0 ['ENST00000519148.5_1_8:144413480-144442081:-|nuORF'] 100360 12353 SKRRDKRWVKY True H1975_Epitope_Rep2 1520.8688136199999 1520.8677099358601 52.601 2 -1.5029232723499586 0.41809663385531465 1.0 ['ENST00000523402.5_1_8:22411983-22419017:+|nuORF', 'ENST00000517535.5_1_8:22411983-22423386:+|nuORF', 'ENSG00000120896|ENST00000240123|SORBS3'] 124200 6316 VGTASQRFIE True NCI_RA007_Epitope_Rep3 1106.5720224816198 1106.57092993586 31.847 2 -1.5030338425131649 0.4181216030648865 1.0 ['ENST00000497465.1_1_15:44065316-44067617:-|nuORF', 'nc|ENSG00000128886|Q9HB65-2|ELL3', 'ENST00000417761.2_1_15:44065316-44087594:-|nuORF', 'ENSG00000128886|ENST00000319359|ELL3', 'ENST00000467869.5_1_15:44065316-44068571:-|nuORF'] 20980 9515 EQQRKEVKKDY True H1975_Epitope_Rep3 1449.75759140517 1449.7564899358601 41.605 2 -1.5030755700752487 0.4181216030648865 1.0 ['nc|ENSG00000100461|Q86U06-3|RBM23', 'ENST00000557667.5_1_14:23373372-23380602:-|nuORF', 'nc|ENSG00000100461|Q86U06-4|RBM23', 'nc|ENSG00000100461|Q86U06-2|RBM23', 'ENSG00000100461|ENST00000359890|RBM23', 'ENST00000556984.5_1_14:23377568-23380602:-|nuORF', 'ENST00000556365.1_1_14:23377855-23380602:-|nuORF', 'ENST00000556687.5_1_14:23375339-23380602:-|nuORF', 'ENST00000554955.5_1_14:23375339-23380602:-|nuORF'] 135007 17595 WCWEGRGQTL True PC9_epitope_Rep5 1234.5553268716596 1234.5542299358601 72.687 2 -1.5031624129977827 0.4181243365486685 1.0 ['ENSG00000158201|ENST00000289119|ABHD3', 'ENST00000577928.5_1_18:19263865-19284533:-|nuORF', 'ENST00000579875.5_1_18:19244061-19284599:-|nuORF', 'ENST00000579982.1_1_18:19282269-19284734:-|nuORF', 'ENST00000578270.5_1_18:19244077-19283696:-|nuORF'] 53935 13517 KTQWWHWWAPM True H1975_Epitope_Rep3 1555.7183098758298 1555.7172099358602 57.272 2 -1.5032072741334208 0.4181243365486685 1.0 ['ENST00000318443.9_1_15:73976775-73994724:+|nuORF'] 46457 9825 ISTRSKDP True PC9_epitope_Rep1 902.4821448480599 902.48104993586 42.653 2 -1.5032504933832302 0.4181243365486685 1.0 ['nc|ENSG00000101040|Q9ULU4-19|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-16|ZMYND8', 'ENSG00000101040|ENST00000471951|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-11|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-10|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-13|ZMYND8', 'nc|ENSG00000101040|Q9ULU4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-20|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-5|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-9|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-22|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-12|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-14|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-18|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-21|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-8|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-23|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-15|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-17|ZMYND8', 'ZMYND8|p.Q264Kfs*22|1|0.19|ENSG00000101040|chr20:47283603-47283603|G/-|frameshift_variant', 'ZMYND8|p.C255*|1|0.08|ENSG00000101040|chr20:47283616-47283631|ATAACATTCTGGACAT/-|frameshift_variant'] 129766 2453 VRREILGEESC True NCI_RA007_Epitope_Rep1 1289.6397847716098 1289.63812490379 12.937 3 -1.503307831325168 0.4181243365486685 1.0 ['ENST00000508689.1_1_5:138629669-138643017:+|nuORF'] 124230 21401 VGTGAGLLEIK True PC9_epitope_Rep2 1056.61791004488 1056.61737496793 87.791 1 -1.5033253772503024 0.4181243365486685 1.0 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 123375 23322 VGMHSFLV True PC9_epitope_Rep4 888.4527592960799 888.4522149679301 97.966 1 -1.503437987410254 0.4181243365486685 1.0 ['ENSG00000119431|ENST00000374180|HDHD3'] 13388 5775 DLYHHMQL True PC9_epitope_Rep1 1055.4858503295102 1055.48474993586 27.03 2 -1.5034500148792822 0.4181243365486685 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 2019 8441 AEKECRDREER True NCI_RA007_Epitope_Rep1 1419.6524747136298 1419.6513699358602 36.832 2 -1.5034605784896096 0.4181243365486685 1.0 ['ENST00000523841.5_1_8:27593707-27605781:-|nuORF', 'ENST00000519299.1_1_8:27605547-27606050:-|nuORF', 'ENST00000521220.1_1_8:27593735-27605871:-|nuORF', 'nc|ENSG00000147419|Q86WR0-2|CCDC25', 'ENSG00000147419|ENST00000356537|CCDC25'] 27680 4609 FPHFDLSHG True PC9_epitope_Rep3 1055.48247920123 1055.48138993586 22.824 2 -1.5034819408898137 0.4181243365486685 1.0 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 74127 7203 NEARLYVLAFK True H1975_Epitope_Rep1 1322.7346711326197 1322.73356993586 32.719 2 -1.5037306278829998 0.41816272844748015 1.0 ['ENST00000552861.5_1_12:95452024-95452138:-|nuORF'] 122724 9693 VGGIAQIIAA True PC9_epitope_Rep1 911.5440168286299 911.54290993586 42.14 2 -1.503750605972025 0.41816272844748015 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 58301 17067 LELWVNYYVRW True PC9_epitope_Rep1 1539.7874349814701 1539.78632993586 70.473 2 -1.5037646351385836 0.41816272844748015 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 9740 17821 AYGYDHSP True NCI_RA007_Epitope_Rep5 908.36644638948 908.36534993586 75.343 2 -1.5037830994772952 0.41816272844748015 1.0 ['ENSG00000145391|ENST00000274031|SETD7'] 22119 6316 ESQRQTDSKN True PC9_epitope_Rep2 1191.5479925617499 1191.54634490379 29.692 3 -1.5039179301360703 0.41820111680280586 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L'] 48603 25493 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 104.68 3 -1.5039347226697504 0.41820111680280586 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 14841 16709 DVVKVLSKTTE True NCI_RA007_Epitope_Rep1 1217.68671788069 1217.68562993586 69.118 2 -1.5039956146139841 0.41820111680280586 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 124279 15840 VGTLQSTK True NCI_RA007_Epitope_Rep4 832.46543215476 832.4648849679301 68.79 1 -1.503997313438256 0.41820111680280586 1.0 ['ENST00000583350.1_1_18:14377547-14378720:-|nuORF'] 123479 9253 VGPEAGVV True PC9_epitope_Rep2 726.39120458534 726.39065496793 40.93 1 -1.5040556355074413 0.41820782906653436 1.0 ['ENST00000366718.5_1_1:228332177-228332423:+|nuORF'] 28591 12439 FSGNLIKDD True NCI_RA007_Epitope_Rep4 1007.4923751785899 1007.49126993586 54.853 2 -1.504078956229089 0.41821454117538476 1.0 ['ENST00000554643.5_1_12:57146314-57157040:+|nuORF'] 27019 6650 FLEVAEAP True NCI_RA007_Epitope_Rep1 874.4436340810198 874.44252993586 29.879 2 -1.5041411639218276 0.41822796492847253 1.0 ['CON__Q2KJF1'] 81023 17120 PILVMKFI True NCI_RA007_Epitope_Rep5 959.58779621691 959.58724496793 72.623 1 -1.504150405803638 0.41822796492847253 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 83401 13798 PTKRSSYL True PC9_epitope_Rep6 950.5185303567798 950.51742993586 64.875 2 -1.504203063615143 0.4182462131262907 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.Q6493Kfs*7|1|0.08|ENSG00000188738|chr2:185808781-185808781|C/-|frameshift_variant', 'FSIP2|p.E6689Afs*15|1|0.41|ENSG00000188738|chr2:185813783-185813786|AAGT/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 97213 4600 SDYSFSVIAMS True NCI_RA007_Epitope_Rep1 1205.52744035797 1205.52634993586 21.984 2 -1.5042222321465932 0.418264460903071 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 37012 10914 GVPADQLRVIF True PC9_epitope_Rep1 1213.68190728377 1213.68080993586 46.866 2 -1.5042481459499744 0.41827117197143615 1.0 ['nc|ENSG00000185345|O60260-6|PRKN', 'nc|ENSG00000185345|O60260-7|PRKN', 'nc|ENSG00000185345|O60260-5|PRKN', 'nc|ENSG00000185345|O60260-8|PRKN', 'nc|ENSG00000185345|O60260-2|PRKN', 'ENSG00000185345|ENST00000366898|PRKN'] 113606 21421 TLVKMTWYD True PC9_epitope_Rep2 1155.56343194387 1155.56179490379 87.868 3 -1.5044100111412864 0.4183240275021919 1.0 ['ENST00000335420.9_1_7:129772789-129772981:+|nuORF'] 66040 9239 LSEGQRPQL True PC9_epitope_Rep6 1026.5458077337798 1026.54470993586 45.689 2 -1.5046587881775988 0.4183653457922363 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 109505 15580 TDNSLSLKTP True PC9_epitope_Rep5 1074.55570371114 1074.55460993586 64.938 2 -1.504670831849133 0.4183720554645502 1.0 ['ENSG00000185864|ENST00000682606|NPIPB4', 'ENSG00000169203|ENST00000550665|NPIPB12', 'ENSG00000254206|ENST00000698511|NPIPB11', 'nc|ENSG00000243716|C9JG80|NPIPB4', 'ENSG00000198064|ENST00000697092|NPIPB13', 'ENSG00000243716|ENST00000424340|NPIPB5', 'nc|ENSG00000169246|Q92617|NPIPB3', 'nc|ENSG00000169246|Q92617-6|NPIPB3', 'nc|ENSG00000169246|Q92617-5|NPIPB3', 'ENSG00000169246|ENST00000542817|NPIPB3', 'nc|ENSG00000169246|Q92617-3|NPIPB3', 'nc|ENSG00000169246|Q92617-2|NPIPB3', 'ENSG00000196436|ENST00000692376|NPIPB15', 'ENSG00000196993|ENST00000357796|NPIPB9', 'ENSG00000255524|ENST00000683297|NPIPB8', 'ENSG00000198156|ENST00000695563|NPIPB6', 'ENSG00000233232|ENST00000452313|NPIPB7', 'ENSG00000234719|ENST00000399147|NPIPB2'] 52945 18286 KPGPLRRAH True NCI_RA007_Epitope_Rep5 1030.6148307834599 1030.6137299358602 77.137 2 -1.5047749331264235 0.4183728790098393 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 65462 21676 LRKIFKANH True H1975_Epitope_Rep2 1125.6770966868498 1125.67546490379 89.672 3 -1.5047846921460313 0.4183728790098393 1.0 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'nc|ENSG00000132600|Q9NVM4-4|PRMT7'] 77623 1717 NTEMNKTRPLS True H1975_Epitope_Rep1 1289.63978477161 1289.63812490379 8.9034 3 -1.5048026732872943 0.4183728790098393 1.0 ['ENST00000560341.2_1_15:40348684-40349006:+|nuORF'] 10916 7192 DAATIMQPYFT True PC9_epitope_Rep4 1256.5747249035599 1256.57362993586 34.968 2 -1.5048039142391005 0.4183728790098393 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 132287 5301 VTWHVPIDCIL True NCI_RA007_Epitope_Rep2 1294.6743793751798 1294.6727249037901 25.243 3 -1.5048206256529957 0.4183728790098393 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 118660 5962 TYSRNERWEY True H1975_Epitope_Rep1 1402.62657723562 1402.62548993586 28.004 2 -1.5048230912376859 0.4183728790098393 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 93245 24776 RPRLGLRALPA True NCI_RA007_Epitope_Rep5 1218.76730867358 1218.7662099358602 102.79 2 -1.504828535729536 0.4183728790098393 1.0 ['ENST00000315251.10_1_3:53857337-53857781:-|nuORF'] 935 4916 ADPDEIMWF True NCI_RA007_Epitope_Rep4 1122.46919720586 1122.46756490379 25.368 3 -1.5049661108108607 0.4184026576233649 1.0 ['nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000592329.1_1_17:73974613-73975103:-|nuORF', 'ENST00000589301.1_1_17:73953610-73974899:-|nuORF'] 81777 13947 PLPNQQTSF True PC9_epitope_Rep1 1030.5083595959 1030.50777496793 58.483 1 -1.5049749384210094 0.4184093661687525 1.0 ['ENST00000482301.1_1_3:49714104-49717481:+|nuORF'] 108861 2743 TAAARLPPSV True H1975_Epitope_Rep2 981.5607295219299 981.55962993586 14.593 2 -1.5051049629699726 0.4184276091169143 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A'] 116421 23510 TTKKSKLLSET True PC9_epitope_Rep4 1234.7132669816997 1234.7121699358602 98.734 2 -1.5051917816596556 0.4184380802989585 1.0 ['ENST00000474427.6_1_6:134493222-134493432:-|nuORF'] 67801 13686 LTAADHRQL True PC9_epitope_Rep5 1023.5461420869501 1023.54504993586 57.67 2 -1.5052618165134815 0.4184380802989585 1.0 ['ENSG00000268651|ENST00000599837|CTAG1A', 'ENSG00000184033|ENST00000328435|CTAG1B', 'ENSG00000126890|ENST00000369585|CTAG2'] 13776 14400 DQGVHLLG True NCI_RA007_Epitope_Rep2 837.4344663796498 837.43391496793 60.676 1 -1.505277513363471 0.4184380802989585 1.0 ['ENST00000341853.5_1_15:100340094-100345094:-|nuORF', 'nc|ENSG00000182397|Q6ZS02|DNM1P46', 'ENST00000561042.5_1_15:100340094-100347099:-|nuORF'] 72701 10681 MMLSWLLQNEP True NCI_RA007_Epitope_Rep1 1360.65192967844 1360.6508299358602 45.537 2 -1.5052857667652413 0.4184380802989585 1.0 ['ENST00000288502.8_2_9:117373626-117379440:+|nuORF'] 48607 26432 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 108.79 3 -1.5052985757823028 0.4184380802989585 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 74698 24058 NGTATVLSV True PC9_epitope_Rep2 860.46034677432 860.45924993586 98.042 2 -1.5053990447153849 0.4184447878941662 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 34376 20965 GPGAGGHY True H1975_Epitope_Rep1 714.30853759054 714.3079849679301 87.088 1 -1.5054102255127713 0.41845149533464815 1.0 ['ENST00000409262.7_1_2:74326608-74327766:+|nuORF'] 72774 6729 MNVSVC[Carbamidomethyl]GLYTY True H1975_Epitope_Rep3 1305.573345284 1305.57224993586 30.84 2 -1.5054501209966042 0.41846490975145606 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'A2M|p.A833Pfs*3|1|0.09|ENSG00000175899|chr12:9090456-9090456|G/-|frameshift_variant', 'A2M|p.V515Cfs*45|1|0.14|ENSG00000175899|chr12:9101159-9101160|-/A|frameshift_variant'] 16776 11093 EETRIPAHL True PC9_epitope_Rep3 1064.5614577979197 1064.56036993586 47.666 2 -1.5054638649015288 0.41846490975145606 1.0 ['ENST00000565137.1_1_16:31498819-31499703:-|nuORF'] 27419 8908 FLYAFFDPRFR True PC9_epitope_Rep1 1477.7506555499297 1477.7495499358602 39.104 2 -1.5055722058814887 0.41847243204594464 1.0 ['ENSG00000134817|ENST00000606794|APLNR'] 197 13920 AAFAPFGR True PC9_epitope_Rep5 835.4340724568299 835.43296993586 58.564 2 -1.505578988333394 0.41847243204594464 1.0 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1', 'ENST00000477044.6_1_2:70451646-70455482:-|nuORF'] 22073 7059 ESMLDWWSKYF True H1975_Epitope_Rep1 1490.6540378534198 1490.65294993586 32.185 2 -1.5055882515006502 0.41847243204594464 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'nc|ENSG00000115155|Q9HC10-2|OTOF'] 13156 10277 DLRLEHCIE True H1975_Epitope_Rep1 1126.54409348162 1126.54298993586 44.474 2 -1.5056001797344383 0.41847243204594464 1.0 ['NTRK3|p.E314D|1|0.25|ENSG00000140538|chr15:88135363-88135363|C/A|missense_variant'] 18139 4815 EIISCPSSR True PC9_epitope_Rep4 990.4804305959001 990.47932993586 25.098 2 -1.5056171551165993 0.41847243204594464 1.0 ['ENST00000497230.2_1_1:170695565-170695829:+|nuORF'] 43313 19391 IFVLLSRLQDL True PC9_epitope_Rep4 1315.7863723523099 1315.78526993586 82.698 2 -1.5056306117047527 0.41847243204594464 1.0 ['ENST00000602540.5_1_12:76422921-76423041:-|nuORF'] 64445 11513 LPPFDDIVDP True NCI_RA007_Epitope_Rep1 1126.55464108198 1126.55354993586 48.75 2 -1.5056511963747732 0.41847243204594464 1.0 ['ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3'] 56254 17258 LCSSPVWRF True PC9_epitope_Rep2 1093.5378859023701 1093.53737496793 71.643 1 -1.5056583889312447 0.41847243204594464 1.0 ['ENST00000457023.1_1_3:15248030-15258947:+|nuORF', 'ENST00000253693.6_1_3:15248030-15253626:+|nuORF', 'ENST00000418994.1_1_3:15248030-15252351:+|nuORF'] 35329 17618 GRRLQARRFRR True NCI_RA007_Epitope_Rep5 1470.8868637259798 1470.88522490379 74.55 3 -1.5057102544748646 0.41849067047996863 1.0 ['ENSG00000213903|ENST00000345363|LTB4R'] 97222 5393 SDYSFSVIAMS True PC9_epitope_Rep3 1205.52744035797 1205.52634993586 25.817 2 -1.505833561455715 0.41850890849334027 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 91208 14819 RGCRERED True PC9_epitope_Rep6 1019.4566754595498 1019.45556993586 68.972 2 -1.505989435397978 0.41852714608607405 1.0 ['ENST00000458479.1_1_21:34100518-34100596:+|nuORF'] 48734 21148 KDEDFKQYVNK True H1975_Epitope_Rep1 1412.6935941662798 1412.69248993586 87.854 2 -1.506214968478401 0.4185453832581847 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 18046 9048 EIFDIEPK True H1975_Epitope_Rep1 989.50696261357 989.50586993586 39.711 2 -1.5063812015787301 0.41858185634059436 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'FARP2|p.C654Lfs*26|1|0.39|ENSG00000006607|chr2:241468207-241468207|G/-|frameshift_variant', 'nc|ENSG00000006607|O94887-3|FARP2', 'nc|ENSG00000006607|O94887-2|FARP2', 'ENST00000473082.5_1_2:242312627-242344774:+|nuORF'] 57751 7454 LEENVRNQIP True H1975_Epitope_Rep3 1210.6305999868998 1210.6295099358601 33.65 2 -1.5063973982621146 0.41858185634059436 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 107246 15121 SVKLPVLKV True PC9_epitope_Rep5 981.6586526580498 981.65754993586 63.169 2 -1.5065714326348667 0.41859312125998777 1.0 ['ENST00000592024.1_1_17:40253781-40254356:-|nuORF', 'ENSG00000108771|ENST00000251642|DHX58'] 61448 21667 LIWVWKKWMRA True NCI_RA007_Epitope_Rep2 1515.85368114983 1515.8525899358601 89.761 2 -1.5065871806039943 0.41859312125998777 1.0 ['ENST00000360700.4_2_X:84502094-84502157:+|nuORF'] 52944 18187 KPGPLRRAH True NCI_RA007_Epitope_Rep5 1030.6148307834599 1030.6137299358602 76.767 2 -1.5066296254639027 0.41859312125998777 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 119086 10360 VAGPGGLS True H1975_Epitope_Rep1 656.34933977336 656.3487949679301 44.798 1 -1.5066684719281338 0.41859312125998777 1.0 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant', 'USP24|p.V1215*|1|0.31|ENSG00000162402|chr1:55125751-55125751|C/-|frameshift_variant', 'USP24|p.A1582Qfs*15|1|0.1|ENSG00000162402|chr1:55107257-55107257|C/-|frameshift_variant'] 55297 12426 LADYLTSA True PC9_epitope_Rep4 852.42289863644 852.42180993586 55.601 2 -1.5066693844177352 0.41859312125998777 1.0 ['ENST00000479598.5_1_2:190437559-190445261:-|nuORF', 'SLC40A1|p.S436Lfs*17|1|0.11|ENSG00000138449|chr2:189563681-189563681|C/-|frameshift_variant', 'ENSG00000138449|ENST00000261024|SLC40A1', 'ENST00000418714.1_1_2:190443126-190445261:-|nuORF'] 135895 25196 WPPFLRGLR True PC9_epitope_Rep1 1140.6556329662799 1140.65398490379 101.8 3 -1.5067677494021565 0.41859312125998777 1.0 ['ENSG00000163792|ENST00000296096|TCF23'] 141943 16915 YVGPFTRQY True PC9_epitope_Rep5 1129.55564414149 1129.5545499358602 70.079 2 -1.506775782209186 0.41859312125998777 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 56639 15233 LDIHHRIL True PC9_epitope_Rep3 1015.59269835655 1015.59160993586 63.743 2 -1.5067769365795838 0.41859312125998777 1.0 ['ENSG00000181652|ENST00000639579|ATG9B'] 67725 9901 LSWTVPQGRF True PC9_epitope_Rep1 1189.62439240765 1189.6227449037901 42.942 3 -1.5068071491616772 0.41859312125998777 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 11249 6584 DEERKPTHRQH True NCI_RA007_Epitope_Rep1 1431.69672248411 1431.69562993586 29.622 2 -1.5068176908735174 0.41859312125998777 1.0 ['ENST00000469506.3_1_3:42201841-42226383:+|nuORF', 'nc|ENSG00000182606|Q9UPV9-2|TRAK1'] 57542 10637 LEDQRPPEEH True H1975_Epitope_Rep3 1248.5734790336 1248.5723899358602 45.988 2 -1.5068367024322469 0.41859312125998777 1.0 ['ENST00000412733.1_X:151869075-151869150:+|nuORF', 'ENST00000457643.1_X:151867294-151869150:+|nuORF', 'ENST00000417212.1_X:151936326-151938209:-|nuORF'] 77962 7689 NVLRNPLSR True NCI_RA007_Epitope_Rep2 1067.61997573355 1067.6188699358602 34.535 2 -1.5068668875384708 0.41859312125998777 1.0 ['ENSG00000175489|ENST00000339007|LRRC25'] 6670 24236 APYERRVRWL True PC9_epitope_Rep2 1344.7414878485597 1344.74097496793 98.764 1 -1.5068809813171247 0.4186043830626102 1.0 ['nc|ENSG00000178026|Q2VPJ9-2|LRRC75B', 'ENSG00000178026|ENST00000318753|LRRC75B'] 128898 16339 VQFKSRKER True NCI_RA007_Epitope_Rep3 1176.6727395823998 1176.6716499358602 71.973 2 -1.5069080811945008 0.4186043830626102 1.0 ['PABPC3|p.G171V|1|0.13|ENSG00000151846|chr13:25096710-25096710|G/T|missense_variant'] 68488 15331 LTFQERVL True PC9_epitope_Rep2 1004.5654805491998 1004.56438993586 64.251 2 -1.507019884081718 0.4186043830626102 1.0 ['ENST00000510413.5_2_4:151837871-151842384:-|nuORF'] 42020 13401 IDGSERWWQSP True H1975_Epitope_Rep2 1359.62076357919 1359.6196699358602 56.682 2 -1.5070467582035287 0.4186043830626102 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 129556 9141 VRLLADVTH True H1975_Epitope_Rep1 1022.58727862294 1022.5867749679301 40.067 1 -1.5071606601834358 0.4186043830626102 1.0 ['ENSG00000162378|ENST00000294353|ZYG11B'] 130741 20504 VSWAKARA True PC9_epitope_Rep2 887.4977353425498 887.49662993586 84.299 2 -1.507200558723718 0.4186043830626102 1.0 ['SLC2A6|p.E266K|1|0.44|ENSG00000160326|chr9:133475092-133475092|C/T|missense_variant'] 77924 23600 NVIWFYYRFN True PC9_epitope_Rep3 1420.6928063206399 1420.6917099358602 96.063 2 -1.5073401093891756 0.4186043830626102 1.0 ['ENST00000361671.9_1_9:88637014-88637161:+|nuORF'] 85420 9140 QEWRPLEQVP True NCI_RA007_Epitope_Rep2 1280.6513354314798 1280.6502299358601 40.159 2 -1.5073537727078408 0.4186043830626102 1.0 ['nc|ENSG00000119715|O95718-2|ESRRB'] 85147 10897 QEMFRFPM True H1975_Epitope_Rep2 1084.4834078013598 1084.48230993586 46.945 2 -1.507469488282142 0.4186043830626102 1.0 ['ENSG00000120332|ENST00000239462|TNN', 'TNN|p.W1260*|1|0.16|ENSG00000120332|chr1:175146950-175146950|G/-|frameshift_variant', 'TNN|p.L13I|1|0.05|ENSG00000120332|chr1:175077455-175077455|C/A|missense_variant'] 135924 22607 WPTKIIYLYI True PC9_epitope_Rep5 1308.74819593844 1308.74708993586 91.955 2 -1.5074873041709795 0.4186043830626102 1.0 ['ASAP2-MBOAT2|1|fusion', 'ASAP2-MBOAT2|2|fusion', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENSG00000143797|ENST00000305997|MBOAT2'] 74566 7836 NFWFLQYPLHP True H1975_Epitope_Rep2 1460.7241064489199 1460.72300993586 35.091 2 -1.5075108056042785 0.4186043830626102 1.0 ['ENST00000261797.6_1_5:149933402-149933609:+|nuORF'] 9228 6583 AVNQQQEVLLQ True NCI_RA007_Epitope_Rep5 1268.67246479888 1268.6713699358602 31.982 2 -1.50754393364087 0.4186043830626102 1.0 ['ENSG00000155761|ENST00000336338|SPAG17', 'SPAG17|p.Q1045Afs*3|1|0.19|ENSG00000155761|chr1:118040763-118040764|-/C|frameshift_variant', 'SPAG17|p.V1065*|1|0.21|ENSG00000155761|chr1:118039418-118039418|C/-|frameshift_variant', 'SPAG17|p.V377Efs*28|1|0.05|ENSG00000155761|chr1:118093189-118093199|CTCATTAACCA/-|frameshift_variant'] 56701 14183 LDKVTKSP True PC9_epitope_Rep2 886.5123823471799 886.51128993586 59.823 2 -1.5076939728979057 0.41863414184266345 1.0 ['ENSG00000166780|ENST00000300006|BMERB1', 'nc|ENSG00000166780|Q96MC5-2|BMERB1'] 126322 16065 VLIHHRDI True PC9_epitope_Rep3 1001.5770482924099 1001.57594993586 66.945 2 -1.5078003292250688 0.4186368194759835 1.0 ['ENSG00000172461|ENST00000302103|FUT9'] 36211 5588 GVCMPVKR True PC9_epitope_Rep6 888.4673638144 888.4662699358599 29.54 2 -1.5078288638597377 0.4186368194759835 1.0 ['ENST00000375859.3_1_9:91091428-91091536:+|nuORF'] 92219 23626 RLILTPATF True PC9_epitope_Rep3 1030.61751612206 1030.61640993586 96.165 2 -1.507852079292077 0.4186368194759835 1.0 ['ENSG00000203972|ENST00000371197|GLYATL3'] 125237 19755 VIKKQHRKST True H1975_Epitope_Rep2 1223.7462388758297 1223.7445949037901 81.961 3 -1.5079457809200887 0.4186368194759835 1.0 ['nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 108611 10940 SYPHLVSARP True PC9_epitope_Rep3 1125.59309227937 1125.59198993586 47.063 2 -1.5079860923638713 0.4186368194759835 1.0 ['ENST00000498526.1_1_2:130897068-130897428:-|nuORF'] 94226 12180 RRPWRDARDSA True PC9_epitope_Rep6 1384.7072275981598 1384.7061299358602 58.209 2 -1.508001529970855 0.4186368194759835 1.0 ['ENST00000354190.9_1_11:73366948-73372760:+|nuORF', 'ENST00000545106.1_1_11:73371703-73372760:+|nuORF', 'ENST00000426191.2_1_11:73363908-73372760:+|nuORF'] 27374 15212 FLTWEVLSP True H1975_Epitope_Rep1 1090.5698972233 1090.56937496793 63.777 1 -1.5080267302317905 0.4186368194759835 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|403|3|anti-sense'] 133495 12719 VWFRENWHEEV True H1975_Epitope_Rep2 1529.70516190949 1529.7040699358602 54.024 2 -1.5080315656264058 0.4186368194759835 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 27020 6603 FLEVAEAP True NCI_RA007_Epitope_Rep2 874.4436340810198 874.44252993586 30.292 2 -1.5080429598472915 0.4186368194759835 1.0 ['CON__Q2KJF1'] 52943 17365 KPGPLRRAH True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 76.202 2 -1.5081471588399673 0.4186502218892283 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 102423 12706 SLTPAERLQT True PC9_epitope_Rep3 1114.59823722946 1114.5971499358602 53.897 2 -1.508167765127568 0.4186502218892283 1.0 ['nc|ENSG00000160117|Q8NAG6-1|ANKLE1', 'ENSG00000160117|ENST00000404085|ANKLE1', 'ENST00000404085.5_1_19:17392508-17397358:+|nuORF'] 40561 7116 HRGEKRQVRRD True PC9_epitope_Rep5 1435.7868749011898 1435.78522490379 32.339 3 -1.5081878187534374 0.418658798035916 1.0 ['nc|ENSG00000114904|P51957-3|NEK4', 'nc|ENSG00000114904|P51957-2|NEK4', 'ENSG00000114904|ENST00000233027|NEK4'] 87514 7865 QQHLQHLEL True PC9_epitope_Rep6 1144.5989059358 1144.5978099358601 39.66 2 -1.5082018830512254 0.418658798035916 1.0 ['ENSG00000198400|ENST00000524377|NTRK1', 'nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'PRCC-NTRK1|1|fusion', 'ENST00000530298.5_1_1:156807654-156845592:+|nuORF', 'ENST00000533630.1_1_1:156830726-156834592:+|nuORF'] 30478 7531 GAGAPILGSQ True PC9_epitope_Rep4 869.46068112749 869.45958993586 36.336 2 -1.5082403800868955 0.418658798035916 1.0 ['ENST00000560869.5_2_14:103601703-103601949:+|nuORF'] 39997 9734 HPPPLAFL True H1975_Epitope_Rep2 890.50142374066 890.50032993586 42.428 2 -1.50829696492219 0.41866067312125405 1.0 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 142540 4749 YYKNTLIQWKY True H1975_Epitope_Rep3 1518.7871006282999 1518.78544490379 23.393 3 -1.508298766964508 0.41866067312125405 1.0 ['ENST00000565493.1_1_20:34634032-34634152:-|nuORF'] 113317 20456 TLRKILFEDFR True PC9_epitope_Rep1 1436.81398408248 1436.81288993586 83.495 2 -1.5083918083743437 0.4186904254215604 1.0 ['ENSG00000087263|ENST00000566157|OGFOD1'] 93458 8080 RQHVWLRH True PC9_epitope_Rep5 1130.62097879306 1130.61934490379 36.018 3 -1.5086057688350776 0.41871801963767113 1.0 ['ENST00000434140.5_2_3:46717393-46723043:-|nuORF'] 25608 5747 FEMESEKN True NCI_RA007_Epitope_Rep3 1012.4171616329999 1012.41606993586 29.584 2 -1.508696326040422 0.41871801963767113 1.0 ['ENSG00000170231|ENST00000402432|FABP6', 'nc|ENSG00000170231|P51161-2|FABP6'] 29846 8086 FVSLYRGP True NCI_RA007_Epitope_Rep2 937.5021520166499 937.50104993586 36.085 2 -1.5087205289253107 0.41871801963767113 1.0 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 66419 11941 LSGLPDTVFEI True PC9_epitope_Rep6 1189.6230549949698 1189.6219499358601 57.177 2 -1.5087493649127537 0.41871801963767113 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 82351 17589 PPLLEKQT True PC9_epitope_Rep4 924.5280324113199 924.52692993586 75.671 2 -1.5088605562389852 0.41871801963767113 1.0 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'nc|ENSG00000183337|Q6W2J9-3|BCOR', 'ENST00000490976.5_1_X:39931586-39937182:-|nuORF'] 32387 7813 GFNQSSNLY True H1975_Epitope_Rep1 1028.45632402304 1028.4552299358602 35.007 2 -1.508879428976677 0.41871801963767113 1.0 ['BCR|p.K924N|1|0.75|ENSG00000186716|chr22:23290403-23290403|G/T|missense_variant'] 52950 22153 KPGPLRRAH True PC9_epitope_Rep4 1030.6148307834599 1030.6137299358602 93.431 2 -1.5089337160143237 0.41871801963767113 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 124046 15665 VGSIRAFW True PC9_epitope_Rep3 934.50248636982 934.50138993586 65.401 2 -1.5089870904716491 0.41871801963767113 1.0 ['B3GNT3|p.P244S|1|0.17|ENSG00000179913|chr19:17811733-17811733|C/T|missense_variant'] 110779 5823 TGIEDVCVHW True PC9_epitope_Rep1 1157.51754438061 1157.51590490379 27.213 3 -1.5090600859772298 0.41871801963767113 1.0 ['SLC9A2|p.G519V|1|0.23|ENSG00000115616|chr2:102695083-102695083|G/T|missense_variant'] 128454 11572 VPSEGDYR True H1975_Epitope_Rep1 921.4192102383299 921.41866496793 49.498 1 -1.5090715631247618 0.41871801963767113 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF', 'OBSL1|p.I592M|1|0.11|ENSG00000124006|chr2:219567334-219567334|G/C|missense_variant'] 107803 10654 SVTPRTFDS True PC9_epitope_Rep2 1008.48762415132 1008.48652993586 46.292 2 -1.5091414673385086 0.41871801963767113 1.0 ['ENST00000547785.2_1_14:20146241-20147198:+|nuORF'] 114920 25035 TQTAIAAAIAL True NCI_RA007_Epitope_Rep5 1042.6022599807397 1042.60116993586 103.8 2 -1.5092390378641103 0.41874776716259665 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 13698 7221 DPSSVGVA True NCI_RA007_Epitope_Rep5 730.3497336961799 730.34918496793 34.453 1 -1.5095022365368709 0.41876303628841743 1.0 ['ENSG00000153914|ENST00000334121|SREK1', 'ENST00000380918.7_1_5:65440973-65454737:+|nuORF', 'ENST00000520058.1_1_5:65440204-65449453:+|nuORF'] 84091 21715 PWLFIPLP True PC9_epitope_Rep4 981.5687750244899 981.56766993586 91.722 2 -1.5095056485124927 0.41876303628841743 1.0 ['ENST00000479872.5_1_1:165879160-165879211:+|nuORF'] 92674 21013 RNQNLGLF True H1975_Epitope_Rep3 960.5141136826799 960.5130099358599 87.765 2 -1.5095079782635716 0.41876303628841743 1.0 ['ENST00000609924.1_1_18:3246797-3247004:-|nuORF'] 100408 20013 SLAATPFP True H1975_Epitope_Rep1 802.4225047136199 802.4219549679301 83.287 1 -1.509531605038403 0.41876303628841743 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 76270 25718 NPKIQQAL True PC9_epitope_Rep1 910.52361573722 910.52250993586 103.97 2 -1.5097245087939373 0.418804305238655 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant'] 135808 5079 WNFHWIYWLG True PC9_epitope_Rep5 1420.6716769532397 1420.6700249037901 24.561 3 -1.5100799736029027 0.4188779684061344 1.0 ['ENSG00000103375|ENST00000219660|AQP8'] 139878 10866 YPQWRRIH True PC9_epitope_Rep5 1154.6097454030198 1154.60864993586 46.784 2 -1.5100889557419404 0.4188779684061344 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 119372 18355 VAPGTAPLPRL True PC9_epitope_Rep5 1090.6498788795 1090.6487899358601 75.619 2 -1.5100909119786752 0.4188779684061344 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 126887 19797 VLQLSLRIV True PC9_epitope_Rep5 1039.67536535135 1039.6742699358601 81.194 2 -1.5101092583492088 0.4188779684061344 1.0 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF'] 110161 25695 TEPKLGKQV True PC9_epitope_Rep1 998.5760452328999 998.57494993586 103.87 2 -1.5101362318890532 0.4188779684061344 1.0 ['ENST00000296328.8_1_3:196083300-196083480:-|nuORF'] 59289 22987 LFGLGVRKW True PC9_epitope_Rep2 1074.6338348925399 1074.6327299358602 93.913 2 -1.5101764405301037 0.4188779684061344 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96'] 65866 12103 LSDLQTYLFNF True H1975_Epitope_Rep3 1359.6710678165498 1359.66996993586 51.72 2 -1.5102394674294968 0.4188779684061344 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 34298 23657 GPAHTHPE True H1975_Epitope_Rep2 844.3827651599601 844.38166993586 97.49 2 -1.5102721467931195 0.4188779684061344 1.0 ['CNGA4|p.V128Gfs*67|1|0.08|ENSG00000132259|chr11:6240176-6240189|GTCTACGTGCGGCT/-|frameshift_variant'] 97966 6339 SENWGSPVST True H1975_Epitope_Rep2 1062.4618033263 1062.4607099358602 29.313 2 -1.5103991473215073 0.4188779684061344 1.0 ['ENST00000418983.1_1_6:29759532-29760213:-|nuORF'] 121227 18916 VESYLQPKAK True PC9_epitope_Rep5 1161.6393737654496 1161.63826993586 77.781 2 -1.5104486329665676 0.4188779684061344 1.0 ['ENSG00000254093|ENST00000314787|PINX1'] 66243 19544 LSFAASVTWR True PC9_epitope_Rep5 1136.59784330664 1136.59674993586 80.229 2 -1.510567919148289 0.4188779684061344 1.0 ['ENST00000564978.5_2_16:28975357-28975525:+|nuORF'] 76067 3215 NMEPFYFI True PC9_epitope_Rep3 1059.47355431031 1059.4724499358601 17.398 2 -1.510593665638806 0.41887983777119747 1.0 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-2|TPCN1', 'ENST00000550543.1_1_12:113722432-113724900:+|nuORF'] 106983 15160 SVEKVIQVP True PC9_epitope_Rep3 997.5807962601699 997.57968993586 63.455 2 -1.5106456188066393 0.41887983777119747 1.0 ['nc|ENSG00000143416|Q13228-3|SELENBP1', 'ENSG00000143416|ENST00000368868|SELENBP1', 'nc|ENSG00000143416|Q13228-4|SELENBP1', 'ENST00000427977.6_1_1:151337413-151341586:-|nuORF', 'ENST00000455397.5_1_1:151337021-151341586:-|nuORF', 'ENST00000443708.5_1_1:151337021-151341586:-|nuORF', 'nc|ENSG00000143416|Q13228-2|SELENBP1'] 83873 12693 PVPEYIKG True NCI_RA007_Epitope_Rep5 901.4909186266099 901.48982993586 55.484 2 -1.5107586756851568 0.4188865333210434 1.0 ['ENSG00000278053|ENST00000617633|DDX52', 'DDX52|p.G535V|1|0.61|ENSG00000278053|chr17:37619813-37619813|C/A|missense_variant'] 87119 7886 QNVDKRTSI True PC9_epitope_Rep2 1059.56727145435 1059.5661699358602 35.699 2 -1.5108016021668527 0.41889322871660156 1.0 ['OGDH|p.C700S|1|0.22|ENSG00000105953|chr7:44697417-44697417|G/C|missense_variant'] 26032 22179 FGGVVTIV True H1975_Epitope_Rep3 790.45889022234 790.45778993586 92.753 2 -1.5108834684801824 0.4188999239578773 1.0 ['ENST00000582618.1_1_18:21946774-21948319:-|nuORF'] 99890 5052 SILTAVADEEP True H1975_Epitope_Rep3 1143.56593404167 1143.5648299358602 24.555 2 -1.511009875748481 0.4189248352458639 1.0 ['ENST00000581133.5_1_17:26906381-26907081:-|nuORF', 'ENSG00000076382|ENST00000321765|SPAG5'] 130606 13029 VSSLLTLP True NCI_RA007_Epitope_Rep3 828.49566965388 828.49456993586 58.521 2 -1.5110165897196746 0.4189248352458639 1.0 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF', 'ENST00000372936.3_1_X:100306358-100306577:-|nuORF'] 102141 18117 SLRQQLRER True NCI_RA007_Epitope_Rep3 1184.6738022115599 1184.67214490379 79.386 3 -1.5111478690503786 0.4189315298915861 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 89976 9796 RDGDRLWYENP True PC9_epitope_Rep6 1419.6531263366296 1419.6520299358601 48.132 2 -1.5113944083528574 0.41897169452668687 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 44821 14803 INALRRCFFWR True NCI_RA007_Epitope_Rep2 1480.7873924951598 1480.7862899358602 62.255 2 -1.5114127101156831 0.41897169452668687 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR', 'nc|ENSG00000001626|P13569-3|CFTR'] 59680 5973 LGAMTSMV True PC9_epitope_Rep5 808.38229677776 808.38118993586 27.97 2 -1.5114527112914735 0.41897169452668687 1.0 ['nc|ENSG00000171174|Q9H477-2|RBKS', 'ENSG00000171174|ENST00000302188|RBKS'] 123858 13024 VGRQLGYW True H1975_Epitope_Rep1 977.5083000262498 977.50720993586 55.18 2 -1.511530883652912 0.41897169452668687 1.0 ['ENST00000487016.1_1_3:4774792-4777134:+|nuORF'] 32154 12623 GEVIIPKE True H1975_Epitope_Rep2 883.5014833103099 883.5009349679301 53.652 1 -1.5115462525866679 0.41897169452668687 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 255 17264 AAGEPGPDRP True H1975_Epitope_Rep2 965.4566583762099 965.45556993586 71.697 2 -1.511566969730366 0.41897169452668687 1.0 ['ENST00000504138.5_1_4:1005947-1006274:+|nuORF'] 37815 18875 GYGGGYLA True H1975_Epitope_Rep2 756.3442543929199 756.34314993586 78.362 2 -1.5115973656454962 0.41897838809271465 1.0 ['ENSG00000261308|ENST00000618634|FIGNL2'] 55463 13520 LAGAHMGR True H1975_Epitope_Rep3 811.4122914664299 811.4117449679301 57.284 1 -1.5118975869040607 0.4190099876738051 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'ENST00000462379.1_1_1:2435075-2436649:+|nuORF'] 56579 9738 LDGWAFGWWLV True H1975_Epitope_Rep3 1348.6604435631998 1348.65934993586 42.48 2 -1.511947190290145 0.4190099876738051 1.0 ['ENST00000591996.1_1_17:76416381-76416633:+|nuORF'] 67021 7569 LSPPVRELY True H1975_Epitope_Rep1 1072.59169529704 1072.5905899358602 34.105 2 -1.5119950887864193 0.4190099876738051 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-3|ACAD10', 'ENST00000508303.5_1_12:112159488-112186840:+|nuORF'] 110386 18900 TEVLAALL True NCI_RA007_Epitope_Rep5 828.4956696538799 828.49456993586 79.542 2 -1.5121406627820537 0.4190282001658833 1.0 ['ENSG00000273540|ENST00000614907|AGBL1', 'nc|ENSG00000273540|Q96MI9|AGBL1', 'AGBL1|p.V276Wfs*10|1|0.22|ENSG00000273540|chr15:86258020-86258020|G/-|frameshift_variant'] 25924 18724 FFRNLENY True PC9_epitope_Rep6 1101.5243440132099 1101.5232499358601 84.664 2 -1.5122149246050425 0.4190319310694374 1.0 ['FASTKD1|p.A397Rfs*11|1|0.43|ENSG00000138399|chr2:169555149-169555149|C/-|frameshift_variant'] 46772 14572 ITFKSRPSL True PC9_epitope_Rep5 1047.6076797143498 1047.60658993586 61.05 2 -1.5122492962781857 0.4190319310694374 1.0 ['ENSG00000179168|ENST00000334928|GGN', 'nc|ENSG00000179168|Q86UU5-2|GGN'] 110054 5145 TELESPAWWPF True NCI_RA007_Epitope_Rep2 1361.62920300457 1361.62810993586 24.632 2 -1.512364691747302 0.4190319310694374 1.0 ['ENSG00000143740|ENST00000617596|SNAP47', 'nc|ENSG00000143740|Q5SQN1-2|SNAP47', 'nc|ENSG00000143740|Q5SQN1|SNAP47', 'SNAP47|p.P233Rfs*11|1|0.21|ENSG00000143740|chr1:227759059-227759059|C/-|frameshift_variant'] 126981 19518 VLRRLWKRSDV True NCI_RA007_Epitope_Rep3 1426.8521009267 1426.85044490379 85.154 3 -1.5123991487636201 0.4190319310694374 1.0 ['AMACR|p.C70W|1|0.19|ENSG00000242110|chr5:34007810-34007810|G/C|missense_variant'] 31705 14428 GEGEPCGG True NCI_RA007_Epitope_Rep5 704.2435543754799 704.24300496793 62.178 1 -1.5125477167857202 0.41905058043117743 1.0 ['nc|ENSG00000163453|Q16270-2|IGFBP7', 'ENSG00000163453|ENST00000295666|IGFBP7'] 132383 25063 VVAGARSK True NCI_RA007_Epitope_Rep1 786.4711862415401 786.4706349679301 103.73 1 -1.512599498534563 0.41905058043117743 1.0 ['DAB1|p.E474Rfs*27|1|0.54|ENSG00000173406|chr1:57015007-57015007|T/-|frameshift_variant', 'nc|ENSG00000173406|O75553-3|DAB1', 'nc|ENSG00000173406|O75553-4|DAB1', 'nc|ENSG00000173406|O75553-5|DAB1', 'ENSG00000173406|ENST00000371236|DAB1', 'nc|ENSG00000173406|O75553|DAB1', 'nc|ENSG00000173406|O75553-2|DAB1'] 15323 12061 EAFTDLKHA True PC9_epitope_Rep6 1030.5083595958997 1030.5072699358602 57.705 2 -1.5126260489097945 0.41905058043117743 1.0 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-7|PARPBP', 'nc|ENSG00000185480|Q9NWS1-6|PARPBP'] 34461 22468 GPKKTKRE True PC9_epitope_Rep6 942.5610638750999 942.55996993586 99.417 2 -1.5127919243280232 0.41905058043117743 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 55691 19235 LALFTHST True NCI_RA007_Epitope_Rep5 888.4705175352 888.46942993586 80.853 2 -1.5128139705802854 0.41905058043117743 1.0 ['ENST00000498793.5_1_1:41503212-41512322:-|nuORF'] 30531 18355 GAGNYKFQL True PC9_epitope_Rep2 996.5028802926399 996.50178993586 75.933 2 -1.51282365788433 0.41905058043117743 1.0 ['HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 29682 11051 FVLLLLCP True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 49.379 2 -1.5128329511191938 0.41905058043117743 1.0 ['ENST00000536845.6_1_15:48009643-48009772:+|nuORF'] 116639 14439 TVAQLEGL True PC9_epitope_Rep3 829.4545331178899 829.45342993586 60.646 2 -1.5128606472361237 0.41905058043117743 1.0 ['KANK4|p.Q397L|1|0.3|ENSG00000132854|chr1:62273914-62273914|T/A|missense_variant'] 116799 10371 TVEDPYLFEL True PC9_epitope_Rep2 1224.5914205135198 1224.5897849037901 45.217 3 -1.5129371450332412 0.41905058043117743 1.0 ['ENSG00000185158|ENST00000543378|LRRC37B', 'nc|ENSG00000185158|Q96QE4-2|LRRC37B', 'nc|ENSG00000185158|Q96QE4|LRRC37B', 'ENST00000580871.5_1_17:30358457-30363256:+|nuORF'] 75455 10364 NKDTYEPF True H1975_Epitope_Rep1 1012.4501760134399 1012.44906993586 44.813 2 -1.5129999524364766 0.41905058043117743 1.0 ['nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10', 'ENST00000545759.5_1_12:109895733-109895895:-|nuORF'] 52951 23100 KPGPLRRAH True PC9_epitope_Rep5 1030.6148307834599 1030.6137299358602 93.842 2 -1.513143974430795 0.41905058043117743 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 60473 10107 LGYILIFIEH True NCI_RA007_Epitope_Rep2 1216.68559568188 1216.68448993586 43.902 2 -1.5131574048994045 0.41905058043117743 1.0 ['BCL11A|p.D59Y|1|0.28|ENSG00000119866|chr2:60546181-60546181|C/A|missense_variant'] 89906 16941 RCLPTKDLWWH True NCI_RA007_Epitope_Rep1 1453.72887455953 1453.7277699358601 70.025 2 -1.5132183204431355 0.41905058043117743 1.0 ['ENST00000340990.9_1_1:202920095-202927322:-|nuORF', 'ENST00000426229.1_2_1:202920095-202923414:-|nuORF'] 117082 13041 TVISGHTS True H1975_Epitope_Rep2 800.4028318982001 800.40172993586 55.283 2 -1.5132480314829468 0.41905058043117743 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant'] 32434 16032 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 68.396 2 -1.5132497281617272 0.41905058043117743 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 64411 18946 LPMLPLFI True NCI_RA007_Epitope_Rep5 942.5612471159 942.56014993586 79.714 2 -1.5132541768348633 0.41905058043117743 1.0 ['ENST00000329608.10_2_1:110471647-110471734:+|nuORF'] 22581 10350 ETLAEYQR True PC9_epitope_Rep3 1008.48762415132 1008.48652993586 44.755 2 -1.5132783578859839 0.41905058043117743 1.0 ['ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2'] 36576 19044 GVHFWLRLL True PC9_epitope_Rep1 1139.6603839935499 1139.65873490379 78.043 3 -1.5133037026876737 0.41905058043117743 1.0 ['nc|ENSG00000163704|Q5FWE3-2|PRRT3', 'ENSG00000163704|ENST00000412055|PRRT3'] 70735 21493 LWRRRKWPFDR True NCI_RA007_Epitope_Rep2 1614.90078245462 1614.8996899358601 88.961 2 -1.5133042250845405 0.41905058043117743 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 18597 7472 EKRHCWMKQFK True NCI_RA007_Epitope_Rep5 1519.7540437615496 1519.7529499358602 35.422 2 -1.5133740063211778 0.41905058043117743 1.0 ['LRRIQ1|p.S1543Ifs*14|1|0.13|ENSG00000133640|chr12:85153747-85153748|-/ATCTTGAAAGGCAATAAAAGTC|frameshift_variant', 'nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF', 'ENST00000529408.1_1_12:85431954-85441296:+|nuORF', 'LRRIQ1|p.L280*|1|0.25|ENSG00000133640|chr12:85055631-85055631|T/-|frameshift_variant', 'LRRIQ1|p.I328Nfs*38|1|0.25|ENSG00000133640|chr12:85055770-85055771|-/A|frameshift_variant'] 2045 24634 AEKVEEIVAK True PC9_epitope_Rep4 1114.6233893481397 1114.6222899358602 103.25 2 -1.5135800082203734 0.4191070626576229 1.0 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'nc|ENSG00000130939|O95155-3|UBE4B'] 139767 9642 YPEYLSNFP True NCI_RA007_Epitope_Rep3 1128.51277627 1128.51112490379 45.006 3 -1.513589397942289 0.4191070626576229 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 112382 15615 TLARCDHAFCW True H1975_Epitope_Rep3 1321.56959703681 1321.56848993586 65.481 2 -1.5136247208465667 0.4191070626576229 1.0 ['ENSG00000204839|ENST00000398882|MROH6'] 13569 4800 DPEACDKETGR True PC9_epitope_Rep1 1219.51391555215 1219.51280993586 23.332 2 -1.5136639090793218 0.4191070626576229 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 97489 18331 SEEKPWECK True H1975_Epitope_Rep2 1134.5015599633 1134.4999049037901 76.015 3 -1.5136750132751182 0.4191070626576229 1.0 ['nc|ENSG00000185869|Q3KNS6-3|ZNF829', 'ENSG00000185869|ENST00000391711|ZNF829'] 142930 17714 YYYRDRDWRWV True H1975_Epitope_Rep3 1676.7848092125198 1676.78370993586 74.057 2 -1.5139024741730382 0.419156849875059 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 28699 554 FSRFPEDMMM True PC9_epitope_Rep2 1289.5242866371698 1289.52265490379 3.1327 3 -1.5139027754764274 0.419156849875059 1.0 ['nc|ENSG00000140287|P19113-2|HDC', 'ENSG00000140287|ENST00000267845|HDC', 'ENST00000559816.1_1_15:50534459-50545113:-|nuORF'] 76655 12839 NQSDQLPGWSP True H1975_Epitope_Rep2 1227.5520153130299 1227.5514749679298 54.496 1 -1.5139294949897395 0.419156849875059 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 87957 20573 QRLQAQGIQVF True PC9_epitope_Rep6 1286.70951901394 1286.70842993586 91.863 2 -1.513962439771456 0.419156849875059 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3', 'nc|ENSG00000113971|Q7Z494-5|NPHP3'] 19660 5951 ELREFPWP True NCI_RA007_Epitope_Rep1 1072.53418042092 1072.53308993586 27.195 2 -1.514008060938658 0.41918656871099236 1.0 ['ENST00000508487.2_1_4:74964623-74965000:-|nuORF'] 61007 5085 LIENEEPV True PC9_epitope_Rep5 941.4705771048499 941.46948993586 24.585 2 -1.514036164157528 0.4191932567967482 1.0 ['ENSG00000166135|ENST00000299163|HIF1AN'] 87633 26988 QQQQRRQQEP True H1975_Epitope_Rep2 1324.6596086994 1324.6585099358601 111.35 2 -1.5140433443546248 0.41919994472847866 1.0 ['ENSG00000204442|ENST00000375915|NALF1'] 15516 20471 EANLAGLFPP True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 83.778 2 -1.5140641657723002 0.41921814727387874 1.0 ['ENSG00000134575|ENST00000672073|ACP2', 'nc|ENSG00000134575|P11117-2|ACP2', 'ENST00000444355.5_1_11:47267202-47270343:-|nuORF'] 121749 17640 VFLVSVPAAP True PC9_epitope_Rep2 998.5800679841798 998.57896993586 73.133 2 -1.5143033026604242 0.41928426676492264 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 19648 22003 ELRAPRRLRWK True PC9_epitope_Rep5 1479.88988341775 1479.8887899358601 89.66 2 -1.5143419468262842 0.41928426676492264 1.0 ['CHAT|p.P478R|1|0.2|ENSG00000070748|chr10:49649558-49649558|C/G|missense_variant'] 88181 12621 QRVQLWEHFQS True H1975_Epitope_Rep3 1456.7211463267997 1456.72004993586 53.751 2 -1.5143502770515835 0.41928426676492264 1.0 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-3|HPS1', 'nc|ENSG00000289758|Q92902-2|HPS1', 'ENST00000498219.5_1_10:100189376-100195420:-|nuORF', 'ENST00000470095.5_1_10:100185440-100193832:-|nuORF', 'ENST00000467246.5_1_10:100191016-100205113:-|nuORF'] 134926 2694 VYYDISTAK True PC9_epitope_Rep1 1058.5284263341398 1058.52732993586 14.787 2 -1.5144270329493004 0.4192909532637106 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 71379 16973 LYRRFFVP True NCI_RA007_Epitope_Rep3 1096.6181848284 1096.61767496793 74.627 1 -1.5146806857654413 0.4192994979965919 1.0 ['ENSG00000158315|ENST00000372990|RHBDL2'] 88359 14228 QSKHKKSL True PC9_epitope_Rep2 954.5610638750999 954.55996993586 59.995 2 -1.5146987276842852 0.4192994979965919 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO'] 117128 22761 TVKKSSKK True PC9_epitope_Rep2 904.5705659296399 904.56946993586 93.043 2 -1.5147178259480596 0.4192994979965919 1.0 ['ENST00000418170.5_1_22:35660034-35689641:+|nuORF', 'ENSG00000100281|ENST00000216106|HMGXB4'] 125650 25417 VKLGPALK True H1975_Epitope_Rep1 824.5483739330799 824.5478249679301 105.31 1 -1.5147670289093829 0.41930321451598046 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 15589 8521 EAQTFNSQVGL True H1975_Epitope_Rep3 1192.57241640444 1192.5713099358602 37.762 2 -1.5148040454578213 0.41930321451598046 1.0 ['PAPPA2|p.E252Q|1|0.23|ENSG00000116183|chr1:176557076-176557076|G/C|missense_variant'] 3621 11132 AGPGAVID True PC9_epitope_Rep2 698.35990445706 698.35935496793 48.143 1 -1.514814804345369 0.41930321451598046 1.0 ['nc|ENSG00000183715|Q14982-4|OPCML'] 116400 24720 TTILLLKLL True NCI_RA007_Epitope_Rep1 1026.7052684972998 1026.70467496793 102.36 1 -1.5148389393901378 0.41930321451598046 1.0 ['ENST00000317025.12_1_8:38131368-38131458:-|nuORF'] 36842 22887 GVLHTAAA True H1975_Epitope_Rep2 738.4024379753799 738.4018849679301 94.48 1 -1.5149011385639854 0.41930507264730943 1.0 ['ANKRD52|p.L209V|1|0.2|ENSG00000139645|chr12:56254646-56254646|G/C|missense_variant'] 110651 18668 TFWPMEPAARP True H1975_Epitope_Rep2 1301.6226781554897 1301.6210249037902 77.485 3 -1.5149835589240654 0.41930507264730943 1.0 ['ENST00000232744.12_1_3:127393265-127394869:+|nuORF'] 46095 6234 ISHKHNVP True PC9_epitope_Rep2 930.50354899898 930.50244993586 29.376 2 -1.515042911933881 0.41931175813675037 1.0 ['ENSG00000100109|ENST00000407690|TFIP11'] 18182 17711 EILEPPKKRT True H1975_Epitope_Rep1 1209.70812203161 1209.70648490379 73.717 3 -1.5150773491481035 0.41933552828494464 1.0 ['ENSG00000162069|ENST00000572449|BICDL2', 'nc|ENSG00000162069|A1A5D9-2|BICDL2', 'ENST00000572240.5_1_16:3078109-3079857:-|nuORF'] 62527 10131 LLIYM[Oxidation]VTIM True NCI_RA007_Epitope_Rep5 1111.60212633215 1111.6010299358602 45.604 2 -1.515079903537868 0.41933552828494464 1.0 ['ENSG00000181958|ENST00000641526|OR4A15', 'nc|ENSG00000181958|Q8NGL6|OR4A15', 'OR4A15|p.L83Wfs*15|1|0.14|ENSG00000181958|chr11:55368128-55368128|C/-|frameshift_variant', 'OR4A15|p.V111Cfs*2|1|0.19|ENSG00000181958|chr11:55368211-55368212|-/T|frameshift_variant'] 138976 25515 YKNVIPAL True PC9_epitope_Rep3 916.5382031721998 916.53765496793 103.61 1 -1.515317155630108 0.41933552828494464 1.0 ['PSAP|p.S289Y|1|0.25|ENSG00000197746|chr10:71821919-71821919|G/T|missense_variant'] 48790 24137 KDLVLKYRK True PC9_epitope_Rep4 1161.7233781729299 1161.7217249037901 101.33 3 -1.5153399429206822 0.41933552828494464 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 10169 13430 AYVNNLNVTE True H1975_Epitope_Rep3 1135.55095268387 1135.54984993586 56.93 2 -1.5153412203060057 0.41933552828494464 1.0 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 101310 14265 SLIMDSPRA True PC9_epitope_Rep5 988.5011660404799 988.50006993586 59.874 2 -1.5153515337925614 0.41933552828494464 1.0 ['nc|ENSG00000188747|Q86UR1-2|NOXA1', 'ENSG00000188747|ENST00000683555|NOXA1', 'nc|ENSG00000188747|Q86UR1-3|NOXA1'] 125653 25891 VKLGPALK True NCI_RA007_Epitope_Rep1 824.5483739330799 824.5478249679301 107.16 1 -1.5154134412078255 0.41933552828494464 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 125657 24861 VKLGPALK True NCI_RA007_Epitope_Rep3 824.5483739330799 824.5478249679301 107.49 1 -1.5154914321121893 0.41934889717732654 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 131007 11115 VTDPTGFLRM-[Oxidation] True H1975_Epitope_Rep2 1151.5644949534699 1151.5633899358602 47.79 2 -1.5155266416935331 0.41934889717732654 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 37697 24201 GVYLCMEC True H1975_Epitope_Rep2 916.3492823973199 916.34873496793 99.623 1 -1.5156603331467144 0.4193555813926717 1.0 ['ENSG00000196458|ENST00000360187|ZNF605', 'nc|ENSG00000196458|Q86T29-2|ZNF605'] 142164 20515 YVTEEIKNP True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 84.341 2 -1.5157260579461735 0.4193852883619201 1.0 ['ENSG00000155465|ENST00000674313|SLC7A7'] 116398 24506 TTILLLKLL True NCI_RA007_Epitope_Rep1 1026.7052684972998 1026.70467496793 101.52 1 -1.515954660642574 0.41942650596862013 1.0 ['ENST00000317025.12_1_8:38131368-38131458:-|nuORF'] 60349 6946 LGSPLPRAK True H1975_Epitope_Rep3 937.5709002828099 937.56980993586 31.679 2 -1.5160585153530217 0.41943318905976607 1.0 ['nc|ENSG00000065717|Q04725-3|TLE2', 'ENSG00000065717|ENST00000262953|TLE2', 'nc|ENSG00000065717|Q04725-2|TLE2', 'TLE2|p.S278I|1|0.14|ENSG00000065717|chr19:3013709-3013709|C/A|missense_variant'] 44608 14098 ILQWLTLPDHE True H1975_Epitope_Rep1 1363.7136013348702 1363.71250993586 59.396 2 -1.5161433310744439 0.4194465547804867 1.0 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 66957 15030 LSPDLSHTTL True PC9_epitope_Rep3 1082.56078909158 1082.5596899358602 62.94 2 -1.5162820741843215 0.4194465547804867 1.0 ['ENSG00000198734|ENST00000367797|F5'] 45135 10450 IPNAIISVESI True NCI_RA007_Epitope_Rep2 1154.65468947642 1154.65358993586 45.242 2 -1.516356171772996 0.41945323741007196 1.0 ['CPXM2|p.G665S|1|0.15|ENSG00000121898|chr10:123754687-123754687|C/T|missense_variant'] 49199 15596 KEMMKETFKYF True H1975_Epitope_Rep3 1480.7094445545602 1480.70834993586 65.407 2 -1.516480281968848 0.41947328437579134 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 53750 13133 KSRKKSSP True NCI_RA007_Epitope_Rep4 916.5454138109599 916.54430993586 57.615 2 -1.5164988017089012 0.41947328437579134 1.0 ['ENSG00000050030|ENST00000055682|NEXMIF'] 3884 6188 AHAKHGSRDGS True H1975_Epitope_Rep2 1121.53261728113 1121.53207496793 28.774 1 -1.5165349048015122 0.41947328437579134 1.0 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 87530 13746 QQILSAVD True NCI_RA007_Epitope_Rep5 872.4603467743199 872.45924993586 59.557 2 -1.5165567197096348 0.41947513812154696 1.0 ['PRKAA2|p.E429Nfs*4|1|0.67|ENSG00000162409|chr1:56704467-56704467|G/-|frameshift_variant', 'ENSG00000162409|ENST00000371244|PRKAA2'] 106573 9969 STNERRQSRFL True NCI_RA007_Epitope_Rep2 1392.7222089559598 1392.72110993586 43.405 2 -1.5166288120535572 0.41947513812154696 1.0 ['nc|ENSG00000142632|Q8IW93-2|ARHGEF19', 'ENSG00000142632|ENST00000270747|ARHGEF19'] 64084 20463 LPCRSLATWEN True H1975_Epitope_Rep1 1288.6234064314797 1288.6223099358601 85.108 2 -1.516639447773349 0.4194818199606358 1.0 ['ENST00000406419.1_1_15:78633606-78640316:+|nuORF'] 133198 25344 VVSAIPVPTL True H1975_Epitope_Rep3 994.60628273202 994.6057349679301 105.42 1 -1.5167236284285222 0.41948850164591056 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 48576 4443 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 22.102 3 -1.5167860027035673 0.4194903549560333 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 3157 6940 AGDPPEPPRP True H1975_Epitope_Rep3 1031.50360856863 1031.5025099358602 31.656 2 -1.5167899428444251 0.4194903549560333 1.0 ['ENST00000368678.8_1_6:112041256-112194621:-|nuORF'] 26304 3876 FHLQTFQGIWE True NCI_RA007_Epitope_Rep2 1404.6826355597598 1404.68098490379 19.712 3 -1.5168556573210954 0.4194970363123669 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 114473 12921 TPYDPRWMLAG True PC9_epitope_Rep4 1305.6175927750498 1305.61648993586 57.585 2 -1.5168890896809282 0.41949888936204494 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 84086 17141 PWKSGLDCI True PC9_epitope_Rep6 1017.4953523840499 1017.49424993586 78.518 2 -1.5168998022798867 0.41949888936204494 1.0 ['ENST00000290649.9_2_16:56396705-56396813:-|nuORF'] 122586 11949 VGFESRDP True H1975_Epitope_Rep2 905.4242956187699 905.42318993586 51.04 2 -1.516938488247321 0.41949922905207926 1.0 ['ENST00000577917.5_1_19:5681066-5684844:+|nuORF'] 37698 23896 GVYLCMEC True H1975_Epitope_Rep3 916.3492823973199 916.34873496793 99.629 1 -1.5170504773689484 0.41949922905207926 1.0 ['ENSG00000196458|ENST00000360187|ZNF605', 'nc|ENSG00000196458|Q86T29-2|ZNF605'] 93195 9511 RPPPHPPP True PC9_epitope_Rep1 893.4871706588499 893.48606993586 41.439 2 -1.5170592137411885 0.41949922905207926 1.0 ['ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENST00000470271.5_1_1:41445802-41446012:+|nuORF'] 97202 5513 SDYFQIVGGS True PC9_epitope_Rep5 1071.4872897981497 1071.48618993586 26.214 2 -1.5171742192964262 0.41949922905207926 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant', 'DCC|p.G511Efs*21|1|0.27|ENSG00000187323|chr18:53179073-53179073|G/-|frameshift_variant'] 23647 17025 EWTVYRKKK True PC9_epitope_Rep1 1236.69789170108 1236.69625490379 70.311 3 -1.5172042332222382 0.41949922905207926 1.0 ['ENST00000565271.1_1_17:74668237-74668399:+|nuORF'] 12804 19403 DLFIHIFREWY True PC9_epitope_Rep5 1537.7717849173298 1537.7706899358602 79.679 2 -1.5172450805625388 0.41949922905207926 1.0 ['ENST00000416464.6_1_17:15587015-15587114:-|nuORF'] 59658 15883 LGAGGVKG True H1975_Epitope_Rep1 657.38097425481 657.38042496793 66.405 1 -1.5172531161461063 0.41949922905207926 1.0 ['ENST00000341307.6_1_11:63448974-63449103:+|nuORF'] 70407 6956 LVTLSGLS True PC9_epitope_Rep4 788.4643695256 788.46326993586 33.991 2 -1.5172711322323693 0.41949922905207926 1.0 ['ENST00000468123.1_1_2:202340421-202342983:+|nuORF', 'ENST00000478954.1_1_7:150210046-150210850:-|nuORF', 'nc|ENSG00000082146|Q9C0K7-3|STRADB', 'nc|ENSG00000082146|Q9C0K7-2|STRADB', 'ENSG00000082146|ENST00000194530|STRADB'] 62566 10846 LLKLKHFPSVI True NCI_RA007_Epitope_Rep4 1293.81727855777 1293.81562490379 48.569 3 -1.5172773401419655 0.41949922905207926 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 47620 18138 IVYLYTKKV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 75.176 3 -1.5173426810868362 0.41949922905207926 1.0 ['ENST00000503574.1_1_4:109543115-109543474:+|nuORF', 'ENSG00000109475|ENST00000394667|RPL34'] 32986 7181 GIFFWWRKG True PC9_epitope_Rep6 1195.6290838652696 1195.6274249037901 36.703 3 -1.517360269266291 0.41949922905207926 1.0 ['ENST00000496527.1_1_3:184098136-184098919:+|nuORF'] 25913 22447 FFPPTPKFH True PC9_epitope_Rep5 1116.5756513100798 1116.5745499358602 91.343 2 -1.5173851130654714 0.41949922905207926 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39', 'ENST00000528810.1_1_8:145769259-145771014:-|nuORF'] 50024 23948 KKAILKMFW True PC9_epitope_Rep1 1163.68890724051 1163.68780993586 96.92 2 -1.5175274766939166 0.41949922905207926 1.0 ['ENST00000336735.8_1_14:81942796-81942856:-|nuORF'] 70810 14605 LYARVDKVD True PC9_epitope_Rep5 1077.5818588893299 1077.5812749679299 61.18 1 -1.5175384408137376 0.41949922905207926 1.0 ['TNNI3|p.H101Y|1|0.26|ENSG00000129991|chr19:55154812-55154812|G/A|missense_variant'] 48584 25893 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 107.44 3 -1.5175408679536881 0.41949922905207926 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 76248 23328 NPHFRPKIMR True PC9_epitope_Rep3 1294.7080795452998 1294.70698993586 95.01 2 -1.5175994348880248 0.41949922905207926 1.0 ['nc|ENSG00000204618|Q9H2S5-3|RNF39'] 98214 10111 SETNYIRKI True PC9_epitope_Rep6 1122.6033226099 1122.6022299358601 49.5 2 -1.5176190696702763 0.41949922905207926 1.0 ['ENSG00000135697|ENST00000258168|BCO1'] 120969 6766 VEPHSPSPSSK True PC9_epitope_Rep3 1150.56185172074 1150.56074993586 31.047 2 -1.5176634888944402 0.41949922905207926 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 84727 3515 QDRLLIPRWR True H1975_Epitope_Rep3 1351.7836870137098 1351.78204490379 18.456 3 -1.5176936656214763 0.41949922905207926 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 83836 24534 PVLSLLRREA True PC9_epitope_Rep4 1152.69789170108 1152.6967899358601 102.86 2 -1.5179127573776916 0.41950590861495624 1.0 ['ENSG00000116032|ENST00000234389|GRIN3B', 'GRIN3B|p.A583Gfs*64|1|0.31|ENSG00000116032|chr19:1005249-1005249|C/-|frameshift_variant'] 116442 8883 TTKSDQMEASP True NCI_RA007_Epitope_Rep5 1193.52341760669 1193.5223299358602 40.831 2 -1.5179894386134967 0.4195192672795683 1.0 ['NCOA2|p.P654A|1|0.4|ENSG00000140396|chr8:70156405-70156405|G/C|missense_variant'] 84802 7907 QDYSKYPFEV True NCI_RA007_Epitope_Rep1 1274.58191845898 1274.58082993586 34.75 2 -1.5180535377501918 0.4195192672795683 1.0 ['ENSG00000158481|ENST00000368170|CD1C'] 41474 3173 HYLEFEKTRYE True NCI_RA007_Epitope_Rep2 1513.7201432672898 1513.71850490379 16.987 3 -1.5181057629968624 0.419525946381314 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 102664 18886 SLYHMYEPF True PC9_epitope_Rep4 1185.5164817514499 1185.5153899358602 80.731 2 -1.51814456457508 0.4195326253293599 1.0 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A'] 58411 10050 LENSLREVEVR True H1975_Epitope_Rep1 1342.7204776204599 1342.7193899358601 43.596 2 -1.5181612926235153 0.4195474363546424 1.0 ['CON__H-INV:HIT000015463', 'ENST00000425245.1_1_1:214706446-214706704:+|nuORF'] 114654 14771 TQEKIWEFKGK True H1975_Epitope_Rep1 1392.7401504358797 1392.73904993586 62.041 2 -1.518179135918909 0.4195474363546424 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 112626 6176 TLFAGDSR True NCI_RA007_Epitope_Rep3 865.42938099921 865.42828993586 31.299 2 -1.518274200679935 0.4195474363546424 1.0 ['ENST00000328554.8_1_22:19839984-19842309:-|nuORF', 'ENST00000329517.10_1_22:19808897-19842427:-|nuORF', 'ENST00000416337.1_3_22:19839984-19842274:-|nuORF', 'ENST00000407472.5_1_22:19839984-19842415:-|nuORF', 'ENST00000460402.5_1_22:19776234-19842274:-|nuORF', 'ENST00000403325.5_1_22:19808897-19842309:-|nuORF', 'ENST00000405640.1_1_22:19839984-19842309:-|nuORF'] 122169 19658 VGAHVLYPDV True PC9_epitope_Rep5 1068.56039516876 1068.55928993586 80.671 2 -1.5183245846556916 0.4195474363546424 1.0 ['ENSG00000125878|ENST00000246080|TCF15'] 32248 14053 GEYSLFQK True NCI_RA007_Epitope_Rep2 970.47599683846 970.47544496793 59.322 1 -1.51838682712307 0.4195474363546424 1.0 ['OVCH1|p.L659Qfs*9|1|0.17|ENSG00000187950|chr12:29464656-29464656|A/-|frameshift_variant', 'OVCH1|p.G702Dfs*11|1|0.42|ENSG00000187950|chr12:29464529-29464529|G/-|frameshift_variant', 'ENSG00000187950|ENST00000537054|OVCH1', 'nc|ENSG00000187950|Q7RTY7|OVCH1', 'OVCH1|p.T408Mfs*19|1|0.15|ENSG00000187950|chr12:29477364-29477364|G/-|frameshift_variant'] 127129 10188 VLTPGTTVT True NCI_RA007_Epitope_Rep4 887.4963979298701 887.4958449679301 46.045 1 -1.5184740180114074 0.4195474363546424 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 137244 24772 YCCSACHG True NCI_RA007_Epitope_Rep1 842.25096533838 842.25041496793 102.56 1 -1.5185124065449265 0.4195474363546424 1.0 ['ENSG00000008130|ENST00000341426|NADK', 'nc|ENSG00000008130|O95544-2|NADK', 'ENST00000341426.9_1_1:1696756-1696807:-|nuORF', 'ENST00000464373.1_1_1:1693389-1696851:-|nuORF', 'ENST00000460602.5_1_1:1688544-1696851:-|nuORF', 'ENST00000492845.6_1_1:1687687-1696851:-|nuORF'] 81020 17632 PILVMKFI True NCI_RA007_Epitope_Rep1 959.58779621691 959.58724496793 72.72 1 -1.5185395196791394 0.4195474363546424 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 19597 20460 ELQLEIFH True PC9_epitope_Rep1 1027.53384606775 1027.53274993586 83.511 2 -1.518557741916992 0.4195474363546424 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'CHD3|p.Q1383Rfs*39|1|0.5|ENSG00000170004|chr17:7905630-7905639|AGTCAAAGAG/-|frameshift_variant'] 24924 24243 FCHLELGS True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 100.66 2 -1.518578736907337 0.4195474363546424 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 3029 7331 AFPGRALG True PC9_epitope_Rep1 787.4340724568299 787.43296993586 33.01 2 -1.518671271320298 0.4195474363546424 1.0 ['ENST00000329967.10_1_14:105223084-105225970:+|nuORF'] 69740 23908 LVFAPGVP True NCI_RA007_Epitope_Rep2 798.4639756027799 798.4634249679301 100.37 1 -1.5187278883223387 0.4195474363546424 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'PLD2|p.H216Tfs*25|1|0.19|ENSG00000129219|chr17:4809721-4809721|C/-|frameshift_variant', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF'] 9493 6483 AVVRHVEQVL True NCI_RA007_Epitope_Rep4 1148.6665915728 1148.66494490379 31.533 3 -1.5187787621472553 0.4195474363546424 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 113786 21815 TMWAVLELGAE True NCI_RA007_Epitope_Rep5 1218.5954603481398 1218.59380490379 91.04 3 -1.5187871107421536 0.4195474363546424 1.0 ['nc|ENSG00000155463|Q15070-2|OXA1L', 'ENSG00000155463|ENST00000612549|OXA1L'] 64795 7153 LQATMVYIL True H1975_Epitope_Rep1 1050.5783537320199 1050.5772499358602 32.538 2 -1.5188391854257066 0.4195474363546424 1.0 ['ENST00000426128.6_1_7:108155685-108155751:-|nuORF'] 6025 9883 APKTQRTRR True NCI_RA007_Epitope_Rep2 1112.6526728441597 1112.6515699358602 43.069 2 -1.5188418448043948 0.4195474363546424 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 43529 9895 IGPIKEKFGD True NCI_RA007_Epitope_Rep4 1102.60225998074 1102.60116993586 44.908 2 -1.5189593650303033 0.4195722946312508 1.0 ['ZNF382|p.S155G|1|0.16|ENSG00000161298|chr19:36626360-36626360|A/G|missense_variant'] 140693 16619 YRWPRYFENGK True H1975_Epitope_Rep1 1514.7418817713794 1514.7407899358602 69.302 2 -1.5189683853069473 0.4195722946312508 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B'] 24074 6643 EYNWATVGGR True H1975_Epitope_Rep3 1151.5359713260698 1151.5348699358601 30.507 2 -1.5190213627612295 0.41957599530673045 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 67059 7265 LSPWPEFYAYW True H1975_Epitope_Rep1 1457.66558851329 1457.66448993586 32.954 2 -1.519032222920896 0.41957599530673045 1.0 ['nc|ENSG00000050426|Q6P1Q0-3|LETMD1', 'ENST00000380135.7_1_12:51451801-51451852:+|nuORF', 'ENST00000551931.5_1_12:51449776-51451852:+|nuORF', 'ENST00000546814.1_1_12:51450080-51451852:+|nuORF', 'ENST00000547555.5_1_12:51442173-51451852:+|nuORF'] 124462 12204 VGVLRSGAPL True PC9_epitope_Rep4 967.5814649665098 967.58036993586 54.762 2 -1.519038407097417 0.41957599530673045 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF'] 9308 8594 AVQNQYDLEK True H1975_Epitope_Rep1 1206.5880664685799 1206.58696993586 37.985 2 -1.5190642733373458 0.41957599530673045 1.0 ['nc|ENSG00000166960|Q5BJE1-4|CCDC178'] 3575 5172 AGLYFLMWFQR True PC9_epitope_Rep5 1430.7169128935 1430.71525490379 24.913 3 -1.519152601397974 0.41960455031688887 1.0 ['ENST00000411991.5_1_2:103340290-103347510:-|nuORF'] 109582 22549 TDWIWAGL True NCI_RA007_Epitope_Rep5 960.4705175351999 960.46942993586 93.918 2 -1.5191643110030595 0.41960455031688887 1.0 ['nc|ENSG00000179403|Q6PCB0-2|VWA1', 'ENSG00000179403|ENST00000476993|VWA1'] 63925 7041 LNRHHTIHTGE True NCI_RA007_Epitope_Rep5 1313.65888042341 1313.6577899358601 33.762 2 -1.5192028372388475 0.41960455031688887 1.0 ['ZNF527|p.R490T|1|0.08|ENSG00000189164|chr19:37389518-37389518|G/C|missense_variant'] 21298 4441 EREKFLGA True PC9_epitope_Rep5 948.5028802926397 948.50178993586 22.152 2 -1.5192519668037254 0.41960455031688887 1.0 ['DCT|p.Q140K|1|0.06|ENSG00000080166|chr13:94468923-94468923|G/T|missense_variant'] 25721 5233 FESKVSASE True NCI_RA007_Epitope_Rep5 982.46074069714 982.4596499358599 26.825 2 -1.5192532018341087 0.41960455031688887 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 29582 25553 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 106.33 3 -1.5192973063974622 0.41960455031688887 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 80429 15371 PGKPGKRLV True H1975_Epitope_Rep3 950.6025347642599 950.60142993586 64.534 2 -1.5193006112474423 0.41961122613296525 1.0 ['ENST00000392754.7_2_10:126431146-126431500:-|nuORF'] 14021 16938 DRFWDQWYLWY True H1975_Epitope_Rep2 1676.7412130650398 1676.7401099358601 70.397 2 -1.5194248227326643 0.419629403848587 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 126800 24359 VLPPHLGT True NCI_RA007_Epitope_Rep2 832.4806882960801 832.4801349679301 102.31 1 -1.5194923069940656 0.4196360792252306 1.0 ['ENST00000462139.1_1_1:247463643-247463787:-|nuORF'] 125133 24686 VIGAPEQN True H1975_Epitope_Rep1 826.41848196234 826.41738993586 102.27 2 -1.5195750407141626 0.4196542562368448 1.0 ['IL1RL1|p.A218E|1|0.19|ENSG00000115602|chr2:102342265-102342265|C/A|missense_variant'] 139945 23889 YQARRLRI True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 96.69 2 -1.5196280098800252 0.41968393448656605 1.0 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779017-109779290:+|nuORF'] 43406 12843 IGERTIRR True NCI_RA007_Epitope_Rep5 999.5937609857099 999.59266993586 56.084 2 -1.5197897098146056 0.4197136120535971 1.0 ['CR1L|p.S520R|1|0.18|ENSG00000197721|chr1:207717609-207717609|C/A|missense_variant'] 104565 8357 SQQIEKSTTV True H1975_Epitope_Rep1 1119.57716743171 1119.57606993586 37.075 2 -1.5199461273651858 0.4197432889379615 1.0 ['ENST00000397031.2_1_2:182825941-182826409:-|nuORF'] 20530 18141 EPQILKEV True PC9_epitope_Rep6 954.5385970950199 954.53750993586 82.416 2 -1.5200367221648026 0.4197614638802949 1.0 ['nc|ENSG00000165271|Q9H6R4-2|NOL6', 'nc|ENSG00000165271|Q9H6R4-4|NOL6', 'ENSG00000165271|ENST00000297990|NOL6'] 83438 2742 PTNKQEAEIP True H1975_Epitope_Rep2 1125.56660274801 1125.56550993586 14.592 2 -1.5200605288847744 0.4197681372774532 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 25156 14070 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 58.956 2 -1.5201653859261801 0.41976998274870614 1.0 ['nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.G1426Dfs*32|1|0.19|ENSG00000116183|chr1:176765788-176765788|G/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 33254 7932 GKGRYGEVW True NCI_RA007_Epitope_Rep4 1050.52467836638 1050.5235899358602 37.253 2 -1.5202391778539108 0.41976998274870614 1.0 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'ENSG00000107779|ENST00000372037|BMPR1A', 'ENSG00000115170|ENST00000434821|ACVR1', 'ENSG00000139567|ENST00000388922|ACVRL1'] 73951 3569 NCIHPGFT True PC9_epitope_Rep2 887.39597269595 887.39486993586 19.004 2 -1.520313620049154 0.4197766558176444 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 123633 16479 VGQGVQAA True NCI_RA007_Epitope_Rep4 728.3817025307999 728.38115496793 71.437 1 -1.5205210588985103 0.4197821911979484 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 4570 20132 AKPGGFGMG True NCI_RA007_Epitope_Rep5 820.3901590395199 820.38906993586 84.386 2 -1.520571247360633 0.4197821911979484 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 59897 16837 LGGIQVVYI True PC9_epitope_Rep3 960.5644179200399 960.56332993586 69.915 2 -1.5205829320260587 0.4197821911979484 1.0 ['ENST00000431657.5_1_3:44409097-44442080:+|nuORF', 'nc|ENSG00000179152|Q8N3R3-4|TCAIM', 'ENSG00000179152|ENST00000342649|TCAIM'] 29587 25526 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 105.64 3 -1.5206406379962338 0.4197821911979484 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 127940 16722 VPGWVLVCA True NCI_RA007_Epitope_Rep4 942.4997094884999 942.49860993586 72.505 2 -1.5206587751294482 0.4197821911979484 1.0 ['ENST00000512215.5_1_4:102268226-102268316:-|nuORF'] 127239 22462 VLWTRLRELPD True PC9_epitope_Rep3 1396.7826839542 1396.7815899358602 91.677 2 -1.5206698170347528 0.4197821911979484 1.0 ['nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 80994 21248 PIIVKDDVEP True PC9_epitope_Rep4 1123.61249031127 1123.6113899358602 89.895 2 -1.5211095964701076 0.41985303418852565 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 46017 9239 ISGGAMGG True H1975_Epitope_Rep1 648.29011064508 648.28956496793 40.448 1 -1.5211311324196852 0.41985303418852565 1.0 ['ENST00000469204.1_1_10:73111448-73116001:+|nuORF', 'nc|ENSG00000198246|Q9BZD2-2|SLC29A3', 'ENSG00000198246|ENST00000373189|SLC29A3'] 13214 13655 DLSKEERLWEV True H1975_Epitope_Rep1 1402.7092442304202 1402.70814993586 57.657 2 -1.5212385770561092 0.4198548774738101 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 131008 11211 VTDPTGFLRM-[Oxidation] True H1975_Epitope_Rep2 1151.5644949534699 1151.5633899358602 48.164 2 -1.5212966329620852 0.4198548774738101 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 82340 21506 PPKRGGPC True PC9_epitope_Rep1 810.4170424936998 810.41594993586 87.558 2 -1.5213617562420783 0.41988454727352176 1.0 ['ENST00000598782.1_1_19:4785174-4785513:-|nuORF'] 130833 8547 VTATARPCL True NCI_RA007_Epitope_Rep5 930.49568673722 930.49458993586 39.558 2 -1.5214059495072823 0.4198978887815648 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'nc|ENSG00000030066|Q12769-2|NUP160'] 36464 14805 GVGGGGHG True NCI_RA007_Epitope_Rep3 596.26667277856 596.2661249679301 65.659 1 -1.5214181210391486 0.4198978887815648 1.0 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 111659 8307 TIEGKIGK True H1975_Epitope_Rep3 844.5018176634799 844.50072993586 36.937 2 -1.5215035768124108 0.41991122967596534 1.0 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-5|ATP7A'] 31193 24485 GCCICRAK True H1975_Epitope_Rep1 852.3768345578399 852.37572993586 101.48 2 -1.5215089036723468 0.41991122967596534 1.0 ['ENSG00000139146|ENST00000337682|SINHCAF'] 36372 4693 GVFFLKFPSDY True NCI_RA007_Epitope_Rep1 1318.65977485686 1318.6581149037902 22.337 3 -1.5215920065094861 0.41994273821706585 1.0 ['nc|ENSG00000293307|Q8IWF7|UBE2DNL'] 32680 22535 GGRVGRRVFG True PC9_epitope_Rep6 1059.6049943757498 1059.60388993586 99.694 2 -1.5215968016500299 0.41994273821706585 1.0 ['ENST00000591358.1_1_19:1393133-1393403:+|nuORF'] 122793 21142 VGGPNGGK True PC9_epitope_Rep4 684.35548778296 684.35493496793 89.486 1 -1.5215972357429346 0.41994273821706585 1.0 ['ENSG00000111676|ENST00000396684|ATN1', 'ATN1|p.M371Hfs*9|1|0.25|ENSG00000111676|chr12:6936371-6936372|-/C|frameshift_variant'] 117414 10234 TVPRVYVVF True PC9_epitope_Rep5 1078.6175161220597 1078.61640993586 44.353 2 -1.5216304590041745 0.4199494078417845 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN'] 84729 4449 QDRLLIPRWR True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 21.415 3 -1.5216701655599472 0.41995124867773537 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 115283 17226 TRERRCQH True NCI_RA007_Epitope_Rep3 1084.5308434593198 1084.52974993586 75.655 2 -1.5216793777180608 0.41995124867773537 1.0 ['ENST00000366923.7_1_1:220213559-220219752:-|nuORF'] 124278 6339 VGTLQNKR True NCI_RA007_Epitope_Rep4 914.52976374682 914.52866993586 30.988 2 -1.5217134180435086 0.41995791797454385 1.0 ['ENSG00000160326|ENST00000371899|SLC2A6', 'nc|ENSG00000160326|Q9UGQ3-2|SLC2A6'] 56851 8594 LDPGEEGDK True NCI_RA007_Epitope_Rep1 958.4243551884199 958.42324993586 37.431 2 -1.5217898517902324 0.4199760848069538 1.0 ['ENST00000531174.1_1_11:64813863-64815169:-|nuORF'] 112572 10272 TLELEMSHV True PC9_epitope_Rep4 1057.51139637101 1057.51028993586 47.196 2 -1.5218849544381923 0.42000091979396614 1.0 ['ENST00000411573.6_1_17:45976849-45977116:-|nuORF'] 105892 18527 SSPVYHFV True PC9_epitope_Rep1 934.45486747106 934.45376993586 76.052 2 -1.5219442696118766 0.42000091979396614 1.0 ['ENST00000336156.9_1_22:45592445-45593009:-|nuORF'] 130265 9768 VSGGLHSIIQV True NCI_RA007_Epitope_Rep1 1108.6240580544802 1108.62296993586 41.998 2 -1.522139425275219 0.4200227635920488 1.0 ['ENSG00000166884|ENST00000300127|OR4D6'] 63068 13782 LLQKEEKDREK True H1975_Epitope_Rep3 1414.7779924965796 1414.77688993586 58.316 2 -1.52214126447694 0.4200227635920488 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 86663 18499 QLHRRKVIS True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6921649037902 80.068 3 -1.5221675843129743 0.4200227635920488 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 62997 14612 LLPPIHTY True H1975_Epitope_Rep2 952.5382031721999 952.53710993586 61.364 2 -1.5221703010759347 0.4200227635920488 1.0 ['ENST00000478553.1_1_20:4763250-4763406:-|nuORF'] 28704 12813 FSRHSVARELR True H1975_Epitope_Rep3 1356.73746509728 1356.73636993586 54.504 2 -1.522204269987288 0.4200227635920488 1.0 ['SYT13|p.G256R|1|0.53|ENSG00000019505|chr11:45252501-45252501|C/T|missense_variant'] 33257 15834 GKGTDVLRTL True PC9_epitope_Rep5 1058.60840799034 1058.60730993586 65.898 2 -1.5222392844455368 0.4200427664857905 1.0 ['ENST00000371989.7_1_9:136230106-136230334:-|nuORF'] 91595 9420 RILHVLYTDCI True H1975_Epitope_Rep1 1344.72239219676 1344.72128993586 41.147 2 -1.5223660040287457 0.4200427664857905 1.0 ['ENSG00000149577|ENST00000324225|SIDT2', 'nc|ENSG00000149577|Q8NBJ9-2|SIDT2', 'ENST00000529484.5_1_11:117061404-117064733:+|nuORF', 'ENST00000525065.1_1_11:117062460-117063438:+|nuORF'] 119569 8586 VATFRKNN True NCI_RA007_Epitope_Rep4 948.51411368268 948.5130099358599 39.809 2 -1.5223943355309804 0.4200427664857905 1.0 ['ENSG00000182173|ENST00000333213|TSEN54', 'ENST00000545228.2_1_17:73518583-73520490:+|nuORF'] 26478 8487 FIEERRARENR True NCI_RA007_Epitope_Rep5 1474.7753071579798 1474.7742099358602 39.329 2 -1.5227051320757945 0.4201135814958729 1.0 ['ENST00000415992.5_1_9:139693810-139699267:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-3|CCDC183', 'ENST00000479371.5_1_9:139697227-139701184:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-4|CCDC183', 'ENST00000430612.5_1_9:139694306-139700853:+|nuORF', 'ENST00000371682.7_1_9:139690828-139700853:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-2|CCDC183', 'ENSG00000213213|ENST00000338005|CCDC183'] 36813 20495 GVLENIFGV True PC9_epitope_Rep2 946.5123823471798 946.51128993586 84.264 2 -1.5227326105715788 0.4201135814958729 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 52490 20068 KKWFFYFFYF True PC9_epitope_Rep4 1521.7485302916095 1521.74742993586 85.329 2 -1.5227709178043796 0.42013174382378976 1.0 ['LPA|p.E5Kfs*10|1|0.21|ENSG00000198670|chr6:160664202-160664202|C/-|frameshift_variant'] 81758 16711 PLPHTLLM True NCI_RA007_Epitope_Rep4 920.51535955264 920.5148149679301 72.463 1 -1.522941069466583 0.4201614015726307 1.0 ['ENST00000291574.8_1_21:45523422-45523842:+|nuORF'] 122101 23094 VGACHGPR True PC9_epitope_Rep2 795.3809913381499 795.3804449679301 94.321 1 -1.5229791518009839 0.42016806722689076 1.0 ['ENSG00000178597|ENST00000319098|PSAPL1'] 99709 12325 SIHLQRWDKYS True PC9_epitope_Rep4 1431.7258973540702 1431.72480993586 55.218 2 -1.5230065136227822 0.42017473272789974 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 100352 23519 SKQQRIKMLIL True PC9_epitope_Rep3 1356.82752597164 1356.82588490379 95.746 3 -1.5230298557033572 0.42018757758263986 1.0 ['GHR|p.S482*|1|0.19|ENSG00000112964|chr5:42718952-42718952|C/-|frameshift_variant', 'nc|ENSG00000112964|P10912-4|GHR', 'ENSG00000112964|ENST00000230882|GHR'] 9229 13901 AVNRALRFC True NCI_RA007_Epitope_Rep3 1048.56001832928 1048.55892993586 61.998 2 -1.5230330974076447 0.42018757758263986 1.0 ['nc|ENSG00000186174|Q86UU0-3|BCL9L'] 12777 8130 DLERELDEP True H1975_Epitope_Rep1 1114.51423282198 1114.5131299358602 36.21 2 -1.5231725406641088 0.42018757758263986 1.0 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12', 'ENST00000526291.1_1_6:28553050-28554287:-|nuORF', 'ENSG00000137185|ENST00000252207|ZSCAN9', 'ENSG00000166529|ENST00000292450|ZSCAN21', 'ZBED9|p.K863Efs*10|1|0.13|ENSG00000232040|chr6:28573303-28573304|-/T|frameshift_variant', 'ENSG00000232040|ENST00000452236|SCAND3', 'ZSCAN16|p.T257Ifs*36|1|0.08|ENSG00000196812|chr6:28129672-28129673|-/TCTTTGTT|frameshift_variant', 'ENSG00000196812|ENST00000340487|ZSCAN16', 'nc|ENSG00000137185|O15535-2|ZSCAN9'] 33131 16736 GISLLSCFPN True PC9_epitope_Rep5 1049.52156713189 1049.52046993586 69.382 2 -1.5231771095381825 0.42018757758263986 1.0 ['ENSG00000128274|ENST00000642412|A4GALT'] 74072 10639 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 45.947 1 -1.523267730647503 0.42018757758263986 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 22207 5381 ESWEIIGPYAS True H1975_Epitope_Rep2 1250.58191845898 1250.58082993586 25.734 2 -1.523334703821963 0.42018757758263986 1.0 ['ENST00000380189.8_1_12:50527593-50531570:-|nuORF', 'nc|ENSG00000139624|Q8N5B7-2|CERS5', 'ENSG00000139624|ENST00000317551|CERS5', 'ENST00000551697.5_1_12:50524466-50529244:-|nuORF', 'ENST00000548942.1_1_12:50527593-50529244:-|nuORF', 'ENST00000550079.1_1_12:50524330-50528523:-|nuORF'] 82043 22816 PLWRRMSPM True PC9_epitope_Rep4 1172.59468958584 1172.59358993586 95.983 2 -1.5233949320006863 0.42018757758263986 1.0 ['ENST00000464419.5_1_X:153678394-153678581:+|nuORF'] 85537 11283 QGAVGPEV True PC9_epitope_Rep6 755.38136817763 755.3808149679301 54.415 1 -1.523436756933737 0.42018757758263986 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 2140 4279 AELPFPPCCP True PC9_epitope_Rep4 1072.4721744113199 1072.4710699358602 22.865 2 -1.5234412667336539 0.42018757758263986 1.0 ['ENST00000439955.1_1_2:118593974-118594413:+|nuORF'] 136575 15015 WWHRHHAWMTY True H1975_Epitope_Rep1 1609.71495583089 1609.71384993586 63.002 2 -1.5234555352772414 0.42018757758263986 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 44614 24173 ILRFSDGLKNR True PC9_epitope_Rep5 1317.7517181790897 1317.7506299358602 97.968 2 -1.523481557802868 0.42018757758263986 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|4|1|sense'] 22698 8293 ETRKETAPV True H1975_Epitope_Rep2 1029.5454733806098 1029.54436993586 36.85 2 -1.5234879388778608 0.42018757758263986 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'ENST00000430598.5_1_15:20613931-20667676:-|nuORF', 'ENST00000529624.5_3_15:28877823-28916776:+|nuORF', 'ENST00000428453.5_1_15:20588586-20667676:-|nuORF', 'nc|ENSG00000290376|Q9BVR0|HERC2P3', 'ENST00000424611.5_1_15:20644728-20658919:-|nuORF'] 70905 14704 LYEQLKRE True PC9_epitope_Rep1 1077.5818588893299 1077.5812749679299 61.379 1 -1.5234906759324993 0.42018757758263986 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 129058 23943 VQNSLLAL True PC9_epitope_Rep2 856.5018176634799 856.50072993586 97.578 2 -1.5235304619583334 0.42018757758263986 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 113013 8271 TLMHPSLTRP True H1975_Epitope_Rep1 1151.61211347179 1151.61100993586 36.748 2 -1.523730227452991 0.4202287224872134 1.0 ['nc|ENSG00000158966|Q5VU97-2|CACHD1', 'ENSG00000158966|ENST00000651257|CACHD1'] 93922 15290 RRGGHGGA True H1975_Epitope_Rep3 766.3946672563399 766.39356993586 64.221 2 -1.5239360606708323 0.4202487127620449 1.0 ['ENST00000341116.7_1_22:37415816-37419821:+|nuORF'] 48586 26121 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 108.46 3 -1.5239628116744222 0.4202487127620449 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 41775 13329 IAQEAQYKDL True H1975_Epitope_Rep3 1177.59790287629 1177.5968099358602 56.53 2 -1.5239867579010262 0.4202487127620449 1.0 ['ENSG00000151838|ENST00000537690|CCDC175'] 56704 6029 LDKYYYALYEM True H1975_Epitope_Rep1 1470.67410459166 1470.6730099358601 28.262 2 -1.5241038126544684 0.4202668689445919 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4', 'LAMB4|p.G293Vfs*53|1|0.27|ENSG00000091128|chr7:108104612-108104612|C/-|frameshift_variant', 'nc|ENSG00000091128|A4D0S4-2|LAMB4', 'ENST00000475469.1_1_7:107703197-107763609:-|nuORF'] 67343 10400 LSSGDEFYIA True H1975_Epitope_Rep1 1100.50260550912 1100.5015099358602 44.953 2 -1.5243014774945318 0.4202916872579329 1.0 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 18935 9712 ELEFFLFVVF True H1975_Epitope_Rep1 1288.67436229184 1288.6732699358602 42.284 2 -1.5243372998214377 0.4202916872579329 1.0 ['ENSG00000166884|ENST00000300127|OR4D6', 'OR4D6|p.A110Qfs*8|1|0.14|ENSG00000166884|chr11:59457285-59457285|G/-|frameshift_variant'] 59883 10081 LGGDLLRALN True NCI_RA007_Epitope_Rep3 1040.59784330664 1040.59674993586 46.747 2 -1.5243924091034564 0.4203001815799756 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ITGB2|p.A697Qfs*18|1|0.59|ENSG00000160255|chr21:44886894-44886894|C/-|frameshift_variant', 'ENST00000521987.1_1_21:46321596-46323430:-|nuORF'] 69286 10890 LTTPTKQL True PC9_epitope_Rep4 900.5280324113198 900.52692993586 49.655 2 -1.5244063032943806 0.4203001815799756 1.0 ['ENSG00000131711|ENST00000296755|MAP1B', 'MAP1B|p.P1738Lfs*85|1|0.1|ENSG00000131711|chr5:72198565-72198565|C/-|frameshift_variant'] 61638 18628 LKQENGILR True NCI_RA007_Epitope_Rep2 1069.6243924076498 1069.6232899358602 77.258 2 -1.5244139578230373 0.4203001815799756 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 46103 15286 ISHSTTAL True NCI_RA007_Epitope_Rep4 828.43413202648 828.4335849679301 66.449 1 -1.5245306824134741 0.4203183359190944 1.0 ['ENST00000374358.4_1_1:25687202-25687394:+|nuORF'] 94039 25161 RRKRRHRTIF True NCI_RA007_Epitope_Rep3 1424.8701510326798 1424.8690499358602 108.75 2 -1.5246213720679616 0.4203201673236264 1.0 ['ENSG00000133937|ENST00000238558|GSC'] 127880 9006 VPGGLAKD True NCI_RA007_Epitope_Rep4 755.41775368635 755.41720496793 41.474 1 -1.524622901238231 0.4203201673236264 1.0 ['XIRP2|p.V258D|1|0.29|ENSG00000163092|chr2:167242690-167242690|T/A|missense_variant'] 112848 10372 TLKAKSEI True PC9_epitope_Rep1 888.5280324113199 888.52692993586 44.78 2 -1.5247913572390874 0.42033532135921214 1.0 ['nc|ENSG00000177853|Q6AHZ1-2|ZNF518A', 'ZNF518A|p.I1208Vfs*15|1|0.07|ENSG00000177853|chr10:96159943-96159944|-/GTGTTCCTTC|frameshift_variant', 'ENSG00000177853|ENST00000316045|ZNF518A'] 72192 14847 MGVNMETARF True H1975_Epitope_Rep2 1154.52124986206 1154.5206749679298 62.264 1 -1.5247969713172145 0.42033532135921214 1.0 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENST00000523482.5_1_8:20054917-20070443:+|nuORF', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 109437 24546 TDIFKKKKRK True NCI_RA007_Epitope_Rep1 1290.81359015966 1290.8124899358602 101.68 2 -1.5248353572126307 0.42033532135921214 1.0 ['nc|nan|Q8NDD1-6|C1orf131', 'ENSG00000143633|ENST00000366649|C1orf131', 'nc|nan|Q8NDD1-5|C1orf131'] 100830 18851 SLELELGLVPE True PC9_epitope_Rep3 1197.64926974281 1197.64816993586 77.733 2 -1.524861782115438 0.42033532135921214 1.0 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'ENST00000556539.5_1_12:56737175-56743495:-|nuORF'] 73429 9609 MTVNDSQPED True H1975_Epitope_Rep2 1134.44991831326 1134.4488299358602 41.936 2 -1.5249476755004112 0.42038743479559715 1.0 ['nc|ENSG00000005889|P17010-3|ZFX', 'ENSG00000005889|ENST00000304543|ZFX', 'nc|ENSG00000005889|P17010-2|ZFX'] 71549 13682 MAPTGHST True NCI_RA007_Epitope_Rep5 800.3486881503601 800.34758993586 59.312 2 -1.5250711868115914 0.42038743479559715 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 94677 12834 RRYIKDWLERK True H1975_Epitope_Rep1 1561.8841293309695 1561.8830299358601 54.432 2 -1.5251103963431318 0.42038743479559715 1.0 ['nc|ENSG00000120519|Q0GE19-3|SLC10A7', 'ENSG00000120519|ENST00000335472|SLC10A7', 'nc|ENSG00000120519|Q0GE19-1|SLC10A7'] 77632 17322 NTEVRSFGPLT True PC9_epitope_Rep3 1219.6197009500297 1219.6186099358601 71.803 2 -1.5251151902786768 0.42038743479559715 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'EPHB1|p.R390Afs*58|1|0.16|ENSG00000154928|chr3:135132919-135132919|C/-|frameshift_variant'] 44112 6236 IINVGSGV True H1975_Epitope_Rep3 757.4334037504899 757.43230993586 28.999 2 -1.5251937410449148 0.42038743479559715 1.0 ['nc|ENSG00000083454|Q93086|P2RX5'] 25935 6397 FFSGRQVW True H1975_Epitope_Rep3 1025.5083000262498 1025.5072099358601 29.583 2 -1.5253765763286091 0.42038743479559715 1.0 ['ENSG00000100985|ENST00000372330|MMP9'] 19498 21322 ELPFIKSL True PC9_epitope_Rep2 945.55351888317 945.55242993586 87.479 2 -1.5254215392536867 0.42038743479559715 1.0 ['ENSG00000157483|ENST00000288235|MYO1E'] 33922 11454 GLRGKHHVI True PC9_epitope_Rep6 1015.6039317465901 1015.60282993586 55.118 2 -1.5254333825993622 0.42038743479559715 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B', 'ENST00000504041.1_1_5:169407-179718:+|nuORF'] 129673 22519 VRPLERRKY True PC9_epitope_Rep2 1215.72002412799 1215.71836490379 92.11 3 -1.525434637707469 0.42038743479559715 1.0 ['ENSG00000160396|ENST00000291823|HIPK4'] 24754 15168 FASCMGDS True NCI_RA007_Epitope_Rep4 816.27822563204 816.27712993586 65.936 2 -1.5254882000811147 0.42038743479559715 1.0 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000459929.5_1_1:185275751-185278625:-|nuORF'] 58606 4227 LEQSMREEA True H1975_Epitope_Rep1 1091.49172355559 1091.4906299358602 21.221 2 -1.5255016207122465 0.42038743479559715 1.0 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J', 'ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261794|ENST00000566740|GOLGA8H', 'nc|ENSG00000261480|H3BSY2-2|GOLGA8M'] 54129 7839 KVPEKLAA True PC9_epitope_Rep3 854.5225531080598 854.52144993586 35.141 2 -1.5255093105958901 0.42038743479559715 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 136576 15088 WWHRHHAWMTY True H1975_Epitope_Rep2 1609.71495583089 1609.71384993586 63.187 2 -1.5255153259678786 0.42038743479559715 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 34339 9819 GPDAVALRPE True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 43.105 2 -1.5255584956309305 0.4203959235727334 1.0 ['ENST00000590602.5_1_17:76120219-76121039:-|nuORF', 'ENST00000586271.1_1_17:76120494-76121009:-|nuORF'] 73622 21383 MWKFVSPLC True PC9_epitope_Rep5 1109.54019440149 1109.5390899358601 87.312 2 -1.5255962389894502 0.4203959235727334 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 127884 15637 VPGISKDL True PC9_epitope_Rep6 827.47526856247 827.47416993586 72.351 2 -1.5255970736626832 0.4203959235727334 1.0 ['nc|ENSG00000136631|Q9NRW7-2|VPS45', 'ENST00000477558.1_1_1:150049710-150054979:+|nuORF', 'ENSG00000136631|ENST00000644510|VPS45'] 130497 19257 VSPSSLIP True NCI_RA007_Epitope_Rep5 798.44871946146 798.44762993586 80.937 2 -1.5256446917346158 0.4204025827799352 1.0 ['ENST00000409492.1_1_2:172950333-172951818:+|nuORF'] 53203 13633 KQEIKRLSTEH True PC9_epitope_Rep3 1367.75211210191 1367.75100993586 57.505 2 -1.5257947107965615 0.4204044117647059 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 93672 19420 RQRVIRRHR True NCI_RA007_Epitope_Rep3 1275.7860870555498 1275.78445490379 84.74 3 -1.5258050947762816 0.4204044117647059 1.0 ['nc|ENSG00000005810|O75592-2|MYCBP2', 'ENSG00000005810|ENST00000544440|MYCBP2', 'MYCBP2|p.E1970Lfs*15|1|0.1|ENSG00000005810|chr13:77168510-77168520|AGGCCCTGTTC/-|frameshift_variant'] 110518 6362 TFKATNKK True NCI_RA007_Epitope_Rep2 936.5392658013599 936.53816993586 29.352 2 -1.5258637381105642 0.4204110706448685 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.C2498Afs*46|1|0.22|ENSG00000163092|chr2:167249408-167249408|T/-|frameshift_variant', 'XIRP2|p.L2254Ffs*5|1|0.22|ENSG00000163092|chr2:167248677-167248677|C/-|frameshift_variant', 'XIRP2|p.P2122Hfs*20|1|0.34|ENSG00000163092|chr2:167248281-167248281|C/-|frameshift_variant'] 123000 5373 VGIFPGLW True PC9_epitope_Rep6 887.4905247037899 887.48942993586 28.531 2 -1.525886268486642 0.4204147280142455 1.0 ['ENST00000525245.1_1_11:71164408-71171979:+|nuORF'] 127870 14886 VPGAQYQV True PC9_epitope_Rep2 860.43921740692 860.4386649679301 62.524 1 -1.5259098130789106 0.4204147280142455 1.0 ['nc|ENSG00000151490|Q16827-5|PTPRO', 'PTPRO|p.L896Ffs*14|1|0.57|ENSG00000151490|chr12:15560251-15560251|C/-|frameshift_variant', 'nc|ENSG00000151490|Q16827-2|PTPRO', 'ENSG00000151490|ENST00000281171|PTPRO'] 58104 4918 LEKEILYYRK True H1975_Epitope_Rep1 1353.7656369077297 1353.76399490379 23.992 3 -1.5259569880608814 0.4204147280142455 1.0 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1', 'SMARCA1|p.T810I|1|0.22|ENSG00000102038|chrX:129480714-129480714|G/A|missense_variant'] 73137 24296 MRRIARHFRF True PC9_epitope_Rep5 1388.7724111373598 1388.77130993586 98.477 2 -1.5259919372639403 0.4204147280142455 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF'] 114428 16300 TPTTRRRRTQR True NCI_RA007_Epitope_Rep1 1427.8181750294698 1427.8170699358602 67.513 2 -1.5261064936664246 0.42045284839573116 1.0 ['ENST00000339093.7_1_19:50063260-50063938:-|nuORF'] 33041 25589 GIKRLPLLQKR True H1975_Epitope_Rep1 1320.8717737421196 1320.8701349037901 106.07 3 -1.5261351217532617 0.42045284839573116 1.0 ['ENST00000008527.9_1_12:107487412-107487586:-|nuORF'] 9388 15183 AVSRDGFWPP True PC9_epitope_Rep6 1130.55089311422 1130.5497899358602 70.483 2 -1.5261945394404999 0.42045284839573116 1.0 ['ENST00000581471.2_1_18:5238694-5238925:+|nuORF'] 86664 18601 QLHRRKVIS True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6921649037902 80.457 3 -1.5262302046740015 0.42045284839573116 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 16854 11185 EFEEDLTGI True PC9_epitope_Rep4 1051.47097102767 1051.46986993586 50.802 2 -1.5262828150609007 0.42045950603101667 1.0 ['nc|ENSG00000114115|P09455|RBP1', 'nc|ENSG00000114115|P09455-2|RBP1', 'nc|ENSG00000114115|P09455-3|RBP1', 'ENSG00000114115|ENST00000672186|RBP1'] 40885 21431 HSGALPFP True PC9_epitope_Rep6 824.4180880395201 824.41698993586 95.309 2 -1.526504483216763 0.4204649880536666 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 71150 12506 LYLRELPEPV True PC9_epitope_Rep2 1227.68632395787 1227.68467490379 53.413 3 -1.5265226211026501 0.4204649880536666 1.0 ['ARHGAP24|p.N587Efs*3|1|0.28|ENSG00000138639|chr4:85995406-85995407|-/G|frameshift_variant', 'nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24', 'nc|ENSG00000138639|Q8N264-4|ARHGAP24', 'nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22', 'ENSG00000128805|ENST00000249601|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22'] 60022 10481 LGKKILLEL True NCI_RA007_Epitope_Rep2 1025.6848674058897 1025.68376993586 45.362 2 -1.526632293250274 0.4204649880536666 1.0 ['ENST00000520664.1_1_5:159845973-159846060:-|nuORF'] 18434 23494 EIYFNKKRLE True PC9_epitope_Rep5 1338.7295857521801 1338.7284899358601 95.35 2 -1.5266848524556778 0.4204649880536666 1.0 ['KIF14|p.V1024F|1|0.11|ENSG00000118193|chr1:200589261-200589261|C/A|missense_variant'] 48631 25951 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 108.08 3 -1.5266895059961887 0.4204649880536666 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 56600 22152 LDHNYAQWQE True PC9_epitope_Rep5 1302.5629143498998 1302.56180993586 90.244 2 -1.5267145861559253 0.4204649880536666 1.0 ['KMT2A|p.P3665Tfs*8|1|0.37|ENSG00000118058|chr11:118510042-118510043|-/A|frameshift_variant', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 49790 24021 KHGFRDLRQ True PC9_epitope_Rep3 1155.62612374315 1155.62446490379 97.684 3 -1.5267482916267683 0.42048313174127294 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1'] 125747 25589 VKSLPTQTIT True PC9_epitope_Rep1 1086.62847472858 1086.62736993586 103.45 2 -1.5268540945147986 0.4205012750120609 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 136176 22227 WRRRQRRR True PC9_epitope_Rep4 1268.7551212804399 1268.7540299358602 93.735 2 -1.5268795231118208 0.42050793140284176 1.0 ['ENST00000370332.5_1_1:92949124-92949509:-|nuORF'] 31210 806 GCGHRWRSESK True NCI_RA007_Epitope_Rep1 1301.60473667557 1301.60308490379 4.2652 3 -1.527039185621203 0.42052124372566363 1.0 ['nc|ENSG00000141956|P57071|PRDM15'] 91016 24387 RFEYLWPFWLF True PC9_epitope_Rep1 1602.8023567696198 1602.8012499358601 98.646 2 -1.527058369124938 0.42052124372566363 1.0 ['nc|ENSG00000204178|Q8N5G2-3|MACO1', 'ENSG00000204178|ENST00000374343|MACO1'] 79865 4703 PEKPKHQTEDD True H1975_Epitope_Rep1 1322.61025846514 1322.6086049037901 23.132 3 -1.5271575381694524 0.42052489519324643 1.0 ['ENSG00000125686|ENST00000300651|MED1'] 52948 18547 KPGPLRRAH True NCI_RA007_Epitope_Rep5 1030.6148307834599 1030.6137299358602 78.166 2 -1.5271885460453145 0.42052489519324643 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 73962 3487 NCPSFALH True PC9_epitope_Rep1 887.3959726959499 887.39486993586 18.343 2 -1.5272979350550362 0.42052489519324643 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 94833 20451 RSRYLILDR True NCI_RA007_Epitope_Rep4 1190.68838964654 1190.68728993586 88.56 2 -1.5273683408876144 0.42052489519324643 1.0 ['nc|ENSG00000084628|Q4KMZ8-3|NKAIN1'] 100359 24720 SKRQLVPGKP True PC9_epitope_Rep4 1108.6716769532397 1108.67117496793 103.58 1 -1.5273916279149247 0.42053155077757104 1.0 ['ENST00000219069.5_1_16:3333909-3334074:+|nuORF'] 33797 21956 GLLHVLWG True PC9_epitope_Rep5 893.5123227775299 893.51122993586 89.489 2 -1.527475079003303 0.4205400314692945 1.0 ['L1PA10_dup6827|chr20:45687017-45687860:-|1.2261576937641354|0.4932040244898218|1.31|536.0|30|1|anti-sense'] 130811 11372 VTAPHADP True PC9_epitope_Rep6 806.3922672145 806.39116993586 54.788 2 -1.5274762981223289 0.4205400314692945 1.0 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 40558 16207 HRFWYNYRQRK True NCI_RA007_Epitope_Rep2 1652.84366150132 1652.8425699358602 67.771 2 -1.5274789681315295 0.4205400314692945 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 43742 25183 IHGGPPGY True PC9_epitope_Rep1 796.3867879112399 796.38568993586 101.75 2 -1.5275746279882925 0.42055817158608017 1.0 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A'] 15588 8491 EAQTFNSQVGL True H1975_Epitope_Rep2 1192.57241640444 1192.5713099358602 37.612 2 -1.527608645346153 0.42056482640603643 1.0 ['PAPPA2|p.E252Q|1|0.23|ENSG00000116183|chr1:176557076-176557076|G/C|missense_variant'] 93682 19366 RQSTCGSS True NCI_RA007_Epitope_Rep5 824.34466539908 824.34356993586 81.375 2 -1.5277768782712071 0.4205829658213892 1.0 ['ENST00000244869.2_1_4:75245237-75246779:+|nuORF'] 113079 10707 TLNRQKYRHVD True H1975_Epitope_Rep1 1428.75859446468 1428.7574899358601 46.143 2 -1.5279074817894207 0.420599921909093 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 63457 6026 LLVWRMQWQFW True NCI_RA007_Epitope_Rep2 1591.8122102606699 1591.81057490379 28.048 3 -1.5279591823704175 0.420599921909093 1.0 ['ENST00000464839.5_1_1:89615102-89615213:-|nuORF'] 131320 18412 VTGKEYSV True PC9_epitope_Rep5 881.44944773745 881.4488949679301 75.842 1 -1.5280128379191837 0.420599921909093 1.0 ['ENST00000552656.5_1_12:56610319-56615704:-|nuORF', 'ENST00000345093.8_1_12:56610319-56615573:-|nuORF'] 113082 10858 TLNRQKYRHVD True H1975_Epitope_Rep3 1428.75859446468 1428.7574899358601 46.847 2 -1.5280603616167105 0.420599921909093 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 25579 16433 FEKYYQRL True PC9_epitope_Rep2 1145.58694426977 1145.58529490379 68.451 3 -1.5280936295311787 0.420599921909093 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3'] 36082 7246 GVAETKLL True NCI_RA007_Epitope_Rep1 829.4909186266099 829.48982993586 32.177 2 -1.528118281351092 0.420599921909093 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'nc|ENSG00000144406|Q8N2C7-3|UNC80', 'ENST00000478701.1_1_2:210636760-210659540:+|nuORF'] 12795 10677 DLFDSTRDP True PC9_epitope_Rep3 1064.47745339044 1064.47634993586 46.014 2 -1.528248933009958 0.42061687566028205 1.0 ['nc|ENSG00000116852|O75037-3|KIF21B', 'ENSG00000116852|ENST00000461742|KIF21B', 'nc|ENSG00000116852|O75037-2|KIF21B', 'nc|ENSG00000116852|O75037|KIF21B'] 89992 4339 RDLHRQFPFHE True PC9_epitope_Rep2 1480.73237971684 1480.73074490379 22.037 3 -1.528335960029672 0.42061687566028205 1.0 ['ENST00000462073.5_1_22:30689736-30691829:-|nuORF', 'ENSG00000099992|ENST00000215790|TBC1D10A', 'nc|ENSG00000099992|Q9BXI6-2|TBC1D10A'] 73965 3772 NCPSFALH True PC9_epitope_Rep4 887.3959726959499 887.39486993586 20.661 2 -1.5283439267738004 0.42061687566028205 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 122795 19972 VGGPNGGK True PC9_epitope_Rep6 684.35548778296 684.35493496793 89.487 1 -1.5283778390488447 0.42061687566028205 1.0 ['ENSG00000111676|ENST00000396684|ATN1', 'ATN1|p.M371Hfs*9|1|0.25|ENSG00000111676|chr12:6936371-6936372|-/C|frameshift_variant'] 55485 9348 LAGFRGVP True NCI_RA007_Epitope_Rep1 815.4653725851098 815.46426993586 40.355 2 -1.5283853182335005 0.42061687566028205 1.0 ['ENST00000379888.8_1_10:6131069-6139013:+|nuORF'] 61708 24020 LKYLNKIKPP True NCI_RA007_Epitope_Rep4 1212.7594293284799 1212.75778490379 104.14 3 -1.528474475661797 0.42061687566028205 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 13019 9648 DLNEDLAK True NCI_RA007_Epitope_Rep5 916.4501760134399 916.44962496793 43.749 1 -1.5285293217311495 0.42061869875755004 1.0 ['ENSG00000110002|ENST00000456829|VWA5A'] 37147 21644 GVQGQTPA True PC9_epitope_Rep6 756.3766171503598 756.37606496793 96.139 1 -1.5285436454237011 0.42061869875755004 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 20390 6991 EPAKLEEI True NCI_RA007_Epitope_Rep2 927.49131254943 927.49020993586 31.815 2 -1.5285822036091248 0.4206338270754392 1.0 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 22972 10802 EVERVRRSERY True H1975_Epitope_Rep1 1477.7749728048097 1477.7738699358601 46.513 2 -1.5286491954203354 0.4206338270754392 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 72382 10852 MKFILWRRFRW True H1975_Epitope_Rep1 1637.9129273614499 1637.91127490379 46.701 3 -1.5286936473258887 0.4206338270754392 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF'] 103081 11157 SPGPLKSPQG True PC9_epitope_Rep5 966.51344497634 966.51234993586 47.901 2 -1.5287144588964507 0.4206338270754392 1.0 ['nc|ENSG00000242520|P43359|MAGEA5P'] 31149 10137 GAVTCDIADFF True H1975_Epitope_Rep3 1157.5063109905698 1157.5052099358602 44.036 2 -1.5287487352135163 0.4206404794984556 1.0 ['nc|ENSG00000042062|Q96MK2|RIPOR3', 'ENSG00000042062|ENST00000327979|RIPOR3', 'nc|ENSG00000042062|Q96MK2-2|RIPOR3', 'ENST00000462493.1_1_20:49214115-49253138:-|nuORF'] 77490 17387 NTDDRKRSRSV True PC9_epitope_Rep5 1332.6858234472402 1332.6841649037901 71.881 3 -1.5290040689653424 0.4206610716294876 1.0 ['ENSG00000128849|ENST00000281282|CGNL1'] 141018 28147 YSKQSVFFVW True NCI_RA007_Epitope_Rep1 1289.6444591458899 1289.64280490379 118.65 3 -1.5290500112517296 0.4206610716294876 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'ENST00000469521.5_1_21:45509650-45516542:+|nuORF', 'ENST00000483973.5_1_21:45509395-45516542:+|nuORF'] 99945 12508 SINPVTLRRW True NCI_RA007_Epitope_Rep5 1240.7040397106798 1240.70294993586 54.767 2 -1.5290654047787735 0.4206610716294876 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A', 'PDE9A|p.F442Lfs*9|1|0.29|ENSG00000160191|chr21:42765461-42765461|T/-|frameshift_variant'] 14500 4591 DTKKLRDNY True H1975_Epitope_Rep2 1151.59348620219 1151.5923899358602 22.764 2 -1.5290794677751571 0.4206610716294876 1.0 ['ENSG00000183862|ENST00000329903|CNGA2', 'CNGA2|p.G533Afs*28|1|0.31|ENSG00000183862|chrX:151744099-151744099|G/-|frameshift_variant', 'CNGA2|p.D239Tfs*62|1|0.57|ENSG00000183862|chrX:151743217-151743217|G/-|frameshift_variant'] 12975 23986 DLLPLSLIPV True PC9_epitope_Rep1 1078.66379760814 1078.6627099358602 97.069 2 -1.5290998295261389 0.4206610716294876 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2'] 127102 16778 VLTFFLSSPS True PC9_epitope_Rep6 1096.580461907 1096.57936993586 77.035 2 -1.5291091608646852 0.4206610716294876 1.0 ['CMKLR1|p.A167T|1|0.45|ENSG00000174600|chr12:108292464-108292464|C/T|missense_variant'] 70417 5611 LVTTSVGL True NCI_RA007_Epitope_Rep3 788.4643695256 788.46326993586 29.064 2 -1.5291127843954921 0.4206610716294876 1.0 ['ENSG00000101115|ENST00000217086|SALL4', 'SALL4|p.V477L|1|0.2|ENSG00000101115|chr20:51791054-51791054|C/G|missense_variant'] 74441 4765 NEVDLLGPNQ True NCI_RA007_Epitope_Rep1 1097.53530261973 1097.5342099358602 22.614 2 -1.5291563146934977 0.4206610716294876 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 104384 16691 SQKILTHR True NCI_RA007_Epitope_Rep3 981.5719629119701 981.57086993586 73.465 2 -1.5291732976315924 0.4206610716294876 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant', 'PIK3AP1|p.E50Rfs*9|1|0.18|ENSG00000155629|chr10:96709850-96709850|G/-|frameshift_variant'] 113243 9847 TLQVGSVYRS True PC9_epitope_Rep4 1108.58767254576 1108.58656993586 45.527 2 -1.5291801391272866 0.4206610716294876 1.0 ['ENST00000514264.6_1_17:49242904-49243033:+|nuORF'] 63488 12816 LLWVGRGL True H1975_Epitope_Rep2 912.5545219426798 912.55342993586 54.405 2 -1.529194464506845 0.420667722899589 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|181|3|sense'] 30577 14199 GAIEHLKES True PC9_epitope_Rep4 982.5083595959 982.50726993586 62.524 2 -1.529301218547004 0.42070762731322037 1.0 ['CEP128|p.Q875Rfs*7|1|0.32|ENSG00000100629|chr14:80743257-80743257|T/-|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-1|CEP128', 'ENSG00000100629|ENST00000555265|CEP128', 'CEP128|p.E389Vfs*20|1|0.4|ENSG00000100629|chr14:80831186-80831187|-/A|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-3|CEP128', 'ENST00000554298.5_1_14:81372269-81405743:-|nuORF'] 27313 14246 FLRRLERW True PC9_epitope_Rep2 1174.6723456595798 1174.67071490379 60.065 3 -1.5293476947141802 0.42070762731322037 1.0 ['ENST00000396060.6_1_15:59949671-59949710:-|nuORF'] 3041 17868 AFREKEWQRL True PC9_epitope_Rep1 1361.7204180508097 1361.71932993586 73.523 2 -1.5293552755911464 0.42070762731322037 1.0 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 62565 10678 LLKLKHFPSVI True NCI_RA007_Epitope_Rep4 1293.81727855777 1293.81562490379 47.921 3 -1.5293764273210337 0.42070762731322037 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 57458 15432 LECGHHQREV True PC9_epitope_Rep2 1206.55638950082 1206.5552899358602 64.637 2 -1.5293788573285632 0.42070762731322037 1.0 ['ENST00000598178.1_1_19:41128811-41129744:+|nuORF'] 115968 8564 TSIGNPVQV True PC9_epitope_Rep4 913.4868958753299 913.4863449679301 40.421 1 -1.529387113393335 0.42070762731322037 1.0 ['nc|ENSG00000186417|Q6ZMI3-2|GLDN', 'ENSG00000186417|ENST00000335449|GLDN'] 57328 17746 LEAEFQRLP True PC9_epitope_Rep1 1101.5818588893299 1101.5807699358602 73.058 2 -1.5295719773121736 0.4207160978521656 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'PTPRC|p.E1269Rfs*5|1|0.14|ENSG00000081237|chr1:198756059-198756060|-/C|frameshift_variant', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 136473 24366 WVLLRSSKRQR True PC9_epitope_Rep2 1427.8473498994301 1427.84569490379 99.29 3 -1.529585047568796 0.4207160978521656 1.0 ['ENST00000492190.5_1_5:126112854-126113319:+|nuORF'] 48971 6241 KEEVFWRNYFY True NCI_RA007_Epitope_Rep5 1579.7459640923098 1579.74430490379 30.682 3 -1.5296528807584182 0.4207160978521656 1.0 ['ENSG00000169895|ENST00000380155|SYAP1'] 102131 19666 SLRPLEAEPP True PC9_epitope_Rep1 1107.59242357303 1107.5913299358601 80.469 2 -1.5296866372197668 0.42073121735636804 1.0 ['ENSG00000161940|ENST00000293805|BCL6B'] 129298 22563 VQVREKLKHA True PC9_epitope_Rep4 1206.71968977482 1206.71858993586 95.028 2 -1.5296880916877984 0.42073121735636804 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 15715 9012 EAWRQNCAW True H1975_Epitope_Rep2 1162.49781199554 1162.49670993586 39.616 2 -1.5296913833931285 0.42073121735636804 1.0 ['ENST00000295101.2_1_2:155554859-155555222:+|nuORF'] 3108 7115 AGAGMISK True H1975_Epitope_Rep1 733.37926000265 733.37871496793 32.394 1 -1.5297014471249128 0.42073121735636804 1.0 ['ENSG00000169251|ENST00000351193|NMD3'] 126323 15904 VLIHLLML True H1975_Epitope_Rep2 950.59869525378 950.59758993586 66.376 2 -1.5298045474697186 0.42073485691984525 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 76656 12745 NQSDQLPGWSP True H1975_Epitope_Rep3 1227.5520153130299 1227.5514749679298 54.237 1 -1.5298179008527555 0.42073485691984525 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 31513 3785 GEDEYEKA True PC9_epitope_Rep3 939.3821560232699 939.38104993586 19.661 2 -1.5299804274504276 0.42073485691984525 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 29623 26797 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 109.9 3 -1.5299993935408798 0.42073485691984525 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 59521 10025 LFRWDPGAL True PC9_epitope_Rep4 1073.5658149023698 1073.56470993586 46.223 2 -1.5300165802383232 0.420736676576256 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 57030 16983 LDRSRRFI True NCI_RA007_Epitope_Rep3 1061.60941104985 1061.60887496793 74.665 1 -1.5300652926043719 0.420736676576256 1.0 ['ENST00000419902.2_1_2:122463345-122485438:+|nuORF'] 119803 8905 VCWWRYWWHYP True PC9_epitope_Rep1 1680.7448589768399 1680.7432049037898 39.092 3 -1.530286734682166 0.42075361254261023 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 93852 3889 RRDWDCFWKRK True NCI_RA007_Epitope_Rep4 1594.7939344275794 1594.7922749037898 21.175 3 -1.5303047443715108 0.42075361254261023 1.0 ['nc|ENSG00000151418|Q96LB4-3|ATP6V1G3'] 70267 7651 LVRLYAVVT True H1975_Epitope_Rep3 1032.6331661861998 1032.63206993586 34.411 2 -1.5303238261432397 0.42075361254261023 1.0 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN', 'ENST00000469956.1_1_1:32741525-32742647:+|nuORF', 'ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 47512 14304 IVRFWAKHRWC True H1975_Epitope_Rep3 1500.7924778755998 1500.79138993586 60.366 2 -1.530400970896697 0.42075361254261023 1.0 ['SPATA31A6|p.G810C|1|0.61|ENSG00000185775|chr9:42188130-42188130|G/T|missense_variant'] 102187 14275 SLRVQNSLRRR True NCI_RA007_Epitope_Rep2 1383.81711240031 1383.8160099358602 60.188 2 -1.5304300657255954 0.42075361254261023 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-1|RGS3', 'nc|ENSG00000138835|P49796-4|RGS3', 'ENST00000488620.5_1_9:116327559-116353744:+|nuORF'] 34145 6403 GNDCPHKKSA True PC9_epitope_Rep1 1055.48182757823 1055.4807299358602 29.437 2 -1.5304318918151787 0.42075361254261023 1.0 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7483060-7484826:+|nuORF'] 81523 14177 PLHKYPVWLWK True H1975_Epitope_Rep1 1465.8234265673698 1465.82179490379 59.707 3 -1.5306170551649902 0.4207832154990359 1.0 ['ENSG00000086504|ENST00000199706|MRPL28', 'MRPL28|p.K150Rfs*12|1|0.33|ENSG00000086504|chr16:368630-368630|C/-|frameshift_variant', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 46866 17803 ITKTMELKPL True PC9_epitope_Rep1 1172.6838814297198 1172.68278993586 73.274 2 -1.5308560926899364 0.4208400275418866 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 127795 12217 VPEALRAEVW True PC9_epitope_Rep2 1168.6240580544797 1168.62296993586 52.306 2 -1.530862178168019 0.4208400275418866 1.0 ['ENSG00000152061|ENST00000681986|RABGAP1L', 'nc|ENSG00000152061|Q5R372-4|RABGAP1L', 'nc|ENSG00000152061|Q5R372|RABGAP1L', 'nc|ENSG00000152061|Q5R372-3|RABGAP1L', 'nc|ENSG00000152061|Q5R372-2|RABGAP1L'] 112712 17791 TLGQIYYLKRF True PC9_epitope_Rep5 1400.7816213250396 1400.7799649037902 73.45 3 -1.5309355203728678 0.4208400275418866 1.0 ['ENST00000543425.1_1_12:124075023-124081273:+|nuORF', 'ENSG00000086598|ENST00000262225|TMED2'] 142860 4566 YYTDYVATRWY True NCI_RA007_Epitope_Rep1 1499.6721304457099 1499.6710299358601 21.857 2 -1.530977754217955 0.4208400275418866 1.0 ['ENSG00000100490|ENST00000395834|CDKL1', 'nc|ENSG00000100490|Q00532-3|CDKL1', 'nc|ENSG00000100490|Q00532-2|CDKL1'] 29989 3204 FWWLGFFFYLR True NCI_RA007_Epitope_Rep2 1580.7968774663595 1580.79469987172 17.11 4 -1.5310382150821753 0.4208400275418866 1.0 ['ENST00000275884.10_1_7:140218236-140218428:-|nuORF'] 61591 24765 LKKMKMKKKT True NCI_RA007_Epitope_Rep5 1262.7930550392198 1262.7919499358602 102.75 2 -1.531133298877386 0.4208400275418866 1.0 ['ENST00000553612.5_1_14:81651936-81658969:-|nuORF'] 805 22831 AAYLFLLFL True PC9_epitope_Rep1 1069.62120452017 1069.62010993586 92.617 2 -1.5312430874027623 0.4208400275418866 1.0 ['ENST00000490075.5_1_1:17304687-17307094:-|nuORF', 'ENST00000476788.5_1_1:17303371-17307094:-|nuORF', 'ENST00000478684.5_1_1:17302954-17304768:-|nuORF', 'nc|ENSG00000117122|P55001-3|MFAP2', 'nc|ENSG00000117122|P55001-2|MFAP2', 'ENSG00000117122|ENST00000375535|MFAP2'] 133222 23364 VVSPHGGL True PC9_epitope_Rep3 764.41808803952 764.41698993586 95.15 2 -1.5312654765018165 0.4208400275418866 1.0 ['ENSG00000130150|ENST00000380492|MOSPD2', 'nc|ENSG00000130150|Q8NHP6-2|MOSPD2'] 103287 7554 SPLMPHLFR True NCI_RA007_Epitope_Rep2 1096.5851704479599 1096.58406993586 34.009 2 -1.5312868746712833 0.4208400275418866 1.0 ['ENSG00000173391|ENST00000309539|OLR1', 'ENST00000536989.1_1_12:10312481-10313100:-|nuORF'] 113687 10717 TLYEELHIHS True H1975_Epitope_Rep1 1240.60880191316 1240.6077099358602 46.184 2 -1.5312947399433583 0.4208400275418866 1.0 ['ENSG00000076864|ENST00000374765|RAP1GAP', 'nc|ENSG00000076864|P47736-2|RAP1GAP', 'nc|ENSG00000076864|P47736-3|RAP1GAP', 'nc|ENSG00000076864|P47736-4|RAP1GAP'] 100023 22744 SIQQHEHHRFH True PC9_epitope_Rep3 1454.6915775340199 1454.6904899358601 92.751 2 -1.5312948359451595 0.4208400275418866 1.0 ['ENST00000406961.5_1_2:24974995-24981018:+|nuORF'] 73969 3500 NCPSFALH True PC9_epitope_Rep6 887.3959726959499 887.39486993586 19.668 2 -1.531296200299399 0.4208400275418866 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 86097 13021 QHSWEGRSHF True NCI_RA007_Epitope_Rep4 1269.5639174094097 1269.56282993586 57.189 2 -1.5313069703832578 0.42084667378157237 1.0 ['PHF20|p.G786W|1|0.1|ENSG00000025293|chr20:35938752-35938752|G/T|missense_variant'] 58691 11345 LERPQIEA True PC9_epitope_Rep2 954.5134449763399 954.51234993586 48.958 2 -1.531347579004182 0.42085331986872004 1.0 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 84065 19123 PVYPYPRA True PC9_epitope_Rep5 961.5021520166498 961.50104993586 78.591 2 -1.531399891409091 0.4208829165853826 1.0 ['ENSG00000175707|ENST00000320567|KDF1'] 18420 13398 EIWETTDRLC True H1975_Epitope_Rep2 1264.57578753272 1264.57414490379 56.67 3 -1.5314456241533483 0.4208962074703081 1.0 ['ENST00000588232.5_3_12:53937213-54020121:-|nuORF'] 18490 4163 EKERLRQRAQA True NCI_RA007_Epitope_Rep4 1383.76949350155 1383.7678349037901 22.311 3 -1.5314685092318379 0.4208962074703081 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 11687 18495 DGTIAAITEK True PC9_epitope_Rep5 1017.53423999057 1017.5336749679301 76.164 1 -1.531495985216297 0.4209143276799853 1.0 ['ENSG00000132164|ENST00000254488|SLC6A11'] 46104 15335 ISHSTTAL True NCI_RA007_Epitope_Rep5 828.43413202648 828.4335849679301 65.687 1 -1.5315440576028618 0.4209209726094989 1.0 ['ENST00000374358.4_1_1:25687202-25687394:+|nuORF'] 22489 23287 ETFRPKRGAA True NCI_RA007_Epitope_Rep5 1131.6148903531098 1131.61324490379 96.856 3 -1.5315695902544886 0.42095056685179233 1.0 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 80818 25284 PHPAAIAL True PC9_epitope_Rep5 788.45447354824 788.4539249679301 102.43 1 -1.531633742732961 0.4209686858139508 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 113086 16858 TLNRQKYRHVD True PC9_epitope_Rep1 1428.75859446468 1428.7574899358601 69.668 2 -1.531678511315268 0.42097532989099257 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 67101 14279 LSQHRKIHVEK True NCI_RA007_Epitope_Rep2 1373.7891663169696 1373.7880699358602 60.204 2 -1.531860926141969 0.42101156599963285 1.0 ['ENSG00000180938|ENST00000319286|ZNF572'] 129558 9625 VRLLADVTH True NCI_RA007_Epitope_Rep2 1022.58727862294 1022.5867749679301 42.053 1 -1.531889962561189 0.42101156599963285 1.0 ['ENSG00000162378|ENST00000294353|ZYG11B'] 109508 7208 TDPCQPYRSA True H1975_Epitope_Rep2 1136.49205790876 1136.4909699358602 32.66 2 -1.5319405202991503 0.42102968343028924 1.0 ['ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF'] 44247 3877 IKRNRYYDEDE True NCI_RA007_Epitope_Rep1 1499.7004704518702 1499.69881490379 19.1 3 -1.5320381894714894 0.4210333077090767 1.0 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1', 'nc|ENSG00000050405|Q9UHB6-3|LIMA1', 'nc|ENSG00000050405|Q9UHB6-2|LIMA1', 'nc|ENSG00000050405|Q9UHB6-5|LIMA1'] 113084 11201 TLNRQKYRHVD True NCI_RA007_Epitope_Rep2 1428.75859446468 1428.7574899358601 48.153 2 -1.5321356067589058 0.4210333077090767 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 16129 13936 EEAQKTESVDN True PC9_epitope_Rep3 1248.54698950224 1248.5453549037902 58.682 3 -1.5321661877998776 0.4210333077090767 1.0 ['nc|ENSG00000118418|Q15651|HMGN3'] 29847 13295 FVSNEVGEH True NCI_RA007_Epitope_Rep5 1016.45632402304 1016.45522993586 57.82 2 -1.532206731351065 0.4210333077090767 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 16886 19804 EFKLELVEK True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 81.565 2 -1.532219823543786 0.42105142385093736 1.0 ['ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-3|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A', 'HIF1A-PRKCH|1|fusion', 'HIF1A-PRKCH|2|fusion'] 417 17997 AALIVLTE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 76.019 2 -1.5322694438199052 0.4210532354290959 1.0 ['nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 114171 19859 TPKRRRLWR True H1975_Epitope_Rep3 1267.7737910363498 1267.7726899358602 83.145 2 -1.5322746210294733 0.4210532354290959 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 3052 15359 AFSLSRGT True NCI_RA007_Epitope_Rep4 837.43446637965 837.43336993586 66.745 2 -1.5323086353218214 0.42107799270324225 1.0 ['ENST00000306467.9_1_5:122754157-122758966:-|nuORF', 'ENST00000515110.1_1_5:122758190-122758966:-|nuORF'] 29875 18767 FVTPKVIK True NCI_RA007_Epitope_Rep4 930.5902387450599 930.58914993586 81.191 2 -1.5323497329755573 0.42107799270324225 1.0 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 52946 18373 KPGPLRRAH True NCI_RA007_Epitope_Rep5 1030.6148307834599 1030.6137299358602 77.482 2 -1.5324323697074056 0.42108342511013214 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 33848 9967 GLPEVENLSK True H1975_Epitope_Rep1 1084.57643915572 1084.57534993586 43.274 2 -1.5324473251276198 0.42108342511013214 1.0 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1'] 68934 11423 LTPDAMRSQ True PC9_epitope_Rep1 1017.49132963277 1017.49022993586 48.817 2 -1.5325801564647081 0.42108342511013214 1.0 ['nc|ENSG00000080802|O95628-6|CNOT4', 'ENST00000451834.5_1_7:135047437-135047593:-|nuORF'] 114655 14754 TQEKIWEFKGK True H1975_Epitope_Rep3 1392.7401504358797 1392.73904993586 62.129 2 -1.5326546223060276 0.42108342511013214 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 79151 7314 PALTPPAP True H1975_Epitope_Rep3 762.42759009406 762.42648993586 33.106 2 -1.5326640583584559 0.42108342511013214 1.0 ['ENSG00000160447|ENST00000291906|PKN3'] 72546 24464 MLLFFLLF True PC9_epitope_Rep1 1042.5925472441797 1042.59144993586 98.943 2 -1.5326863422124077 0.42108342511013214 1.0 ['ENST00000266659.7_2_12:75893342-75893732:+|nuORF'] 97216 5173 SDYSFSVIAMS True PC9_epitope_Rep1 1205.52744035797 1205.52634993586 24.751 2 -1.5328016873978367 0.42108523574624296 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 12833 9937 DLGLPEGGAW True PC9_epitope_Rep1 1013.4818104948898 1013.48070993586 43.084 2 -1.5328645226499382 0.42108523574624296 1.0 ['ENST00000456948.5_1_7:26241779-26241902:+|nuORF'] 124293 20518 VGTNGGLK True PC9_epitope_Rep4 744.41300265908 744.4124549679301 87.074 1 -1.533091639937529 0.42111482029574054 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 137254 22439 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 93.48 2 -1.533138699480527 0.42111663014924344 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 132683 3143 VVGRLFQKWFP True PC9_epitope_Rep3 1375.7764763749497 1375.7748449037902 17.081 3 -1.5332090362896673 0.42111663014924344 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 56572 15021 LDGTEINGRN True PC9_epitope_Rep5 1087.52580056519 1087.52470993586 62.782 2 -1.533397006096412 0.4211286992429456 1.0 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENST00000414124.1_1_17:16520269-16520722:-|nuORF'] 84831 10033 QEAHWVLCEVL True PC9_epitope_Rep1 1325.6438075228898 1325.64270993586 43.46 2 -1.5334512470581971 0.4211286992429456 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 102159 25129 SLRRRKAM True PC9_epitope_Rep1 1016.6025518475999 1016.60144993586 101.54 2 -1.533494988060407 0.4211286992429456 1.0 ['ITGAX|p.V928Lfs*50|1|0.21|ENSG00000140678|chr16:31377257-31377257|G/-|frameshift_variant'] 27675 21462 FPGYPIHV True NCI_RA007_Epitope_Rep5 928.4806882960798 928.47958993586 89.621 2 -1.533542350388375 0.4211286992429456 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L'] 90030 23863 RDSSKREGLLA True PC9_epitope_Rep2 1230.66804812478 1230.6669499358602 97.259 2 -1.5335464938195547 0.4211286992429456 1.0 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 12386 14539 DISNVLEWI True PC9_epitope_Rep4 1087.55497543515 1087.5538699358601 63.838 2 -1.5335708362751959 0.4211286992429456 1.0 ['ENSG00000104321|ENST00000262209|TRPA1'] 100306 13032 SKGRVRRF True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 57.229 2 -1.533614132772843 0.4211286992429456 1.0 ['ENST00000474518.1_1_6:10527835-10528955:+|nuORF', 'ENST00000475577.5_1_6:10527835-10626837:+|nuORF'] 137250 19009 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 79.975 2 -1.5337278251042594 0.421158279900437 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 43270 14133 IFRLRPWDA True PC9_epitope_Rep5 1172.6454622054 1172.6438249037901 59.374 3 -1.5338536401094411 0.4211637055983117 1.0 ['ENSG00000186912|ENST00000374519|P2RY4'] 92499 15508 RLWSLWWERHC True NCI_RA007_Epitope_Rep1 1570.76157167014 1570.76097496793 64.407 1 -1.533863071067016 0.4211637055983117 1.0 ['ENST00000272427.10_1_2:73053085-73053139:-|nuORF'] 85516 9163 QGAGDLCP True H1975_Epitope_Rep3 759.32213904935 759.3215949679301 40.235 1 -1.5338944493949134 0.4211637055983117 1.0 ['ENSG00000197548|ENST00000693202|ATG7', 'nc|ENSG00000197548|O95352-2|ATG7', 'nc|ENSG00000197548|O95352-3|ATG7'] 47511 14282 IVRFWAKHRWC True H1975_Epitope_Rep1 1500.7924778755998 1500.79138993586 60.121 2 -1.5339219141797074 0.4211637055983117 1.0 ['SPATA31A6|p.G810C|1|0.61|ENSG00000185775|chr9:42188130-42188130|G/T|missense_variant'] 110053 4527 TELESPAWWPF True NCI_RA007_Epitope_Rep2 1361.62920300457 1361.62810993586 22.24 2 -1.5339544921670007 0.4211637055983117 1.0 ['ENSG00000143740|ENST00000617596|SNAP47', 'nc|ENSG00000143740|Q5SQN1-2|SNAP47', 'nc|ENSG00000143740|Q5SQN1|SNAP47', 'SNAP47|p.P233Rfs*11|1|0.21|ENSG00000143740|chr1:227759059-227759059|C/-|frameshift_variant'] 113824 5171 TNELPPDAPFL True H1975_Epitope_Rep3 1212.60265390356 1212.60154993586 24.99 2 -1.5340426778287892 0.4211637055983117 1.0 ['nc|nan|Q9NQ32-2|C11orf16', 'ENSG00000176029|ENST00000326053|C11orf16'] 68474 14578 LTFLAWWFEW True H1975_Epitope_Rep1 1397.6808446546097 1397.6797499358602 61.28 2 -1.534587631507553 0.4212850392255815 1.0 ['ENSG00000241563|ENST00000377049|CORT', 'nc|ENSG00000251503|Q8N2Z9-2|CENPS'] 64403 23541 LPLTVDHLKQN True PC9_epitope_Rep4 1276.7139356880398 1276.71282993586 98.855 2 -1.5346425730474476 0.42130314603906455 1.0 ['ENSG00000204569|ENST00000376511|PPP1R10'] 124868 13889 VHLHWWLWWLW True NCI_RA007_Epitope_Rep2 1660.8455589942798 1660.8444699358602 58.679 2 -1.5348413684939406 0.421309783232022 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF', 'ENST00000448867.1_1_X:102001081-102003782:+|nuORF'] 58565 5288 LEQLYQDQEVP True NCI_RA007_Epitope_Rep1 1360.6510606479599 1360.64996993586 24.651 2 -1.5349745390363456 0.4213393584200204 1.0 ['nc|ENSG00000108439|Q9NVS9-3|PNPO', 'ENSG00000108439|ENST00000642017|PNPO', 'ENST00000582262.1_1_17:46023691-46048009:+|nuORF', 'nc|ENSG00000108439|Q9NVS9-4|PNPO'] 84520 6831 QAPTDQRGV True PC9_epitope_Rep6 970.4832074772199 970.48210993586 35.139 2 -1.535074390156003 0.4213574639875218 1.0 ['ENST00000587494.1_1_19:10959184-10970726:+|nuORF', 'ENSG00000214212|ENST00000397820|C19orf38'] 141774 24700 YVAKLTNL True NCI_RA007_Epitope_Rep1 920.53311779176 920.53256496793 102.28 1 -1.5351897342538954 0.42135926783953026 1.0 ['nc|ENSG00000189067|Q99732-2|LITAF'] 104589 18551 SQRIQRPGR True NCI_RA007_Epitope_Rep5 1096.62137271588 1096.62026993586 78.18 2 -1.535231746149469 0.42135926783953026 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 17996 12385 EIDQLSRNLQN True H1975_Epitope_Rep1 1328.6684420476 1328.66734993586 52.672 2 -1.5353291437959782 0.42136590400825735 1.0 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-2|KIF15', 'nc|ENSG00000163808|Q9NS87-4|KIF15'] 40251 9408 HQKCRQYCPVT True NCI_RA007_Epitope_Rep5 1361.63325992253 1361.63216993586 42.827 2 -1.535422566385633 0.4213743434482442 1.0 ['RFTN1|p.Y296C|1|0.31|ENSG00000131378|chr3:16370219-16370219|T/C|missense_variant'] 52924 22957 KPGKMFVLR True PC9_epitope_Rep3 1074.6372060208198 1074.63610993586 93.568 2 -1.535542631138904 0.4213743434482442 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 65743 8382 LSDALRQWF True H1975_Epitope_Rep1 1134.5821932425 1134.58108993586 37.169 2 -1.5355515590290532 0.4213743434482442 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 135036 12837 WDKRYCLRHVE True H1975_Epitope_Rep3 1503.74050187239 1503.73940993586 54.598 2 -1.5358569995942142 0.4213942500659396 1.0 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 9680 10039 AYFLYQQQ True PC9_epitope_Rep2 1059.50254593947 1059.5014499358601 43.939 2 -1.5359624869524273 0.4213942500659396 1.0 ['CD74-ROS1|1|fusion', 'nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 25710 3766 FERYLNFYKQT True PC9_epitope_Rep1 1507.7459640923098 1507.7443049037902 19.401 3 -1.5359681361211133 0.4213942500659396 1.0 ['ENSG00000146857|ENST00000662584|STRA8'] 43587 4065 IGSVNKQK True NCI_RA007_Epitope_Rep5 872.5079656730799 872.50686993586 22.081 2 -1.5361069937756542 0.42141522519114594 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 46180 15009 ISLSALPHIT True PC9_epitope_Rep4 1050.60734536118 1050.6062499358602 65.67 2 -1.5361505180243884 0.42141522519114594 1.0 ['ENST00000367306.5_1_1:201453677-201453818:-|nuORF'] 67030 13218 LSPRVVDGI True PC9_epitope_Rep5 954.5498304850598 954.54872993586 55.85 2 -1.5362009427602727 0.42141522519114594 1.0 ['ENSG00000135519|ENST00000257981|KCNH3'] 82770 17830 PRLTVSFSL True PC9_epitope_Rep2 1018.58113061334 1018.58002993586 73.88 2 -1.536238849164508 0.42141522519114594 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 100831 17614 SLELELGLVPE True PC9_epitope_Rep4 1197.64926974281 1197.64816993586 75.77 2 -1.5363188576279903 0.42141522519114594 1.0 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'ENST00000556539.5_1_12:56737175-56743495:-|nuORF'] 11432 9593 DEWLEFFYPQL True NCI_RA007_Epitope_Rep1 1485.6816325002499 1485.68052993586 41.311 2 -1.5363452741466723 0.42141522519114594 1.0 ['ENSG00000163389|ENST00000295588|POGLUT1', 'ENST00000486607.5_1_3:119198882-119211282:+|nuORF', 'ENST00000473648.1_1_3:119209263-119211282:+|nuORF'] 128565 5720 VPTIEGMRM True PC9_epitope_Rep6 1032.5096225492 1032.50852993586 30.151 2 -1.5363685447102362 0.42141522519114594 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 116499 5656 TTPVNRSLSG True PC9_epitope_Rep1 1030.54072235334 1030.5396299358601 26.579 2 -1.5363864823071378 0.42141522519114594 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 55359 7018 LAELQQWLK True NCI_RA007_Epitope_Rep4 1127.63389446219 1127.63278993586 33.622 2 -1.536387472291833 0.42141522519114594 1.0 ['ENSG00000170458|ENST00000302014|CD14'] 56988 6202 LDREQTDRYEF True H1975_Epitope_Rep3 1470.6739213508597 1470.6728299358601 28.869 2 -1.5364056846503873 0.42141522519114594 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 127001 11796 VLRTVRSS True NCI_RA007_Epitope_Rep5 916.54541381096 916.54430993586 52.033 2 -1.5364320541386407 0.42141522519114594 1.0 ['ENST00000474223.1_1_X:23803122-23803970:+|nuORF'] 54118 20669 KVMVPQRRL True NCI_RA007_Epitope_Rep5 1125.6804678151298 1125.67882490379 86.461 3 -1.5364349608900765 0.42141522519114594 1.0 ['STAB2|p.L1127M|1|0.08|ENSG00000136011|chr12:103695553-103695553|C/A|missense_variant'] 15647 9784 EATAVEWRPNT True H1975_Epitope_Rep1 1272.6098645423199 1272.6087699358602 42.564 2 -1.536452152367875 0.42141522519114594 1.0 ['SIGMAR1|p.G165R|1|0.43|ENSG00000147955|chr9:34635811-34635811|C/T|missense_variant'] 75367 5323 NISSENLPV True NCI_RA007_Epitope_Rep4 971.49237517859 971.49126993586 27.038 2 -1.5364677656520267 0.42141522519114594 1.0 ['ENST00000295549.8_1_2:177497817-177502252:-|nuORF'] 12930 10903 DLKPFTEYVFR True H1975_Epitope_Rep1 1413.7292513990099 1413.72814993586 46.901 2 -1.5365938168017856 0.42141522519114594 1.0 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'IL6ST-ANKRD55|1|fusion', 'IL6ST-ANKRD55|2|fusion', 'nc|ENSG00000134352|P40189-2|IL6ST'] 127816 12970 VPELEEYFL True PC9_epitope_Rep1 1137.55939210925 1137.55774490379 54.761 3 -1.536620642322784 0.42141522519114594 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ADGRV1|p.L5812Hfs*7|1|0.14|ENSG00000164199|chr5:90853513-90853514|-/A|frameshift_variant', 'ADGRV1|p.L5941*|1|0.19|ENSG00000164199|chr5:90863822-90863822|C/-|frameshift_variant', 'ADGRV1|p.E5062Nfs*15|1|0.42|ENSG00000164199|chr5:90810441-90810441|G/-|frameshift_variant', 'ADGRV1|p.W5408Gfs*17|1|0.47|ENSG00000164199|chr5:90823447-90823447|T/-|frameshift_variant', 'ADGRV1|p.R3293Yfs*18|1|0.21|ENSG00000164199|chr5:90724958-90724959|-/TTACTCCTTCAAAAACTTATCTATT|frameshift_variant', 'ENST00000509621.1_3_5:89989878-90055411:+|nuORF'] 42290 5797 IDVPSYLPD True NCI_RA007_Epitope_Rep2 1017.50187723313 1017.50078993586 27.167 2 -1.5366274548705041 0.42141522519114594 1.0 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENST00000538033.2_1_2:114353729-114354265:+|nuORF', 'ENST00000482170.6_1_X:155252010-155252984:+|nuORF', 'ENST00000461007.6_1_X:155252382-155252984:+|nuORF'] 107163 13273 SVIETHMRQMR True NCI_RA007_Epitope_Rep2 1386.68602377138 1386.68492993586 56.264 2 -1.5366546763227464 0.42141522519114594 1.0 ['ENSG00000172469|ENST00000358812|MANEA', 'MANEA|p.K380Sfs*7|1|0.24|ENSG00000172469|chr6:95606151-95606151|G/-|frameshift_variant'] 33906 15472 GLQMASRYTV True PC9_epitope_Rep2 1124.5648289261999 1124.56372993586 64.79 2 -1.5366831627909556 0.42141522519114594 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 136398 7750 WTRQCSENMGF True NCI_RA007_Epitope_Rep4 1357.5543408954898 1357.55324993586 36.489 2 -1.536687342293341 0.42141522519114594 1.0 ['ENST00000254029.7_2_X:117543480-117543552:+|nuORF'] 37441 13534 GVTLAQDHFQE True PC9_epitope_Rep4 1243.58331544131 1243.5816749037901 59.955 3 -1.5367744009255158 0.42141522519114594 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 32978 11171 GIEPMLETPLQ True H1975_Epitope_Rep2 1226.62167509598 1226.6205699358602 48.006 2 -1.5368468162999072 0.42141522519114594 1.0 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 109346 5291 TCENSYYQTLV True H1975_Epitope_Rep3 1319.57036779911 1319.5692699358601 25.431 2 -1.5369169373590499 0.42141522519114594 1.0 ['ENSG00000115604|ENST00000233957|IL18R1'] 20326 16890 ENVKRLLFC True PC9_epitope_Rep6 1120.60629981536 1120.60520993586 77.484 2 -1.5369249089095782 0.42141522519114594 1.0 ['nc|ENSG00000105953|Q02218-2|OGDH', 'ENSG00000105953|ENST00000222673|OGDH'] 119322 8904 VANGEDLK True PC9_epitope_Rep4 844.42904664604 844.4279499358599 41.786 2 -1.5369503334946393 0.42141522519114594 1.0 ['nc|ENSG00000188986|Q8WX92|NELFB', 'ENSG00000188986|ENST00000343053|NELFB'] 78888 11222 PAGAPGTPGP True PC9_epitope_Rep2 820.40791727864 820.40682993586 48.494 2 -1.5369667021112288 0.42141522519114594 1.0 ['ENSG00000108821|ENST00000225964|COL1A1'] 137252 21241 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 88.744 2 -1.5369986696619884 0.42141522519114594 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 86447 9663 QKLLSMHTG True H1975_Epitope_Rep1 1013.53280052193 1013.53170993586 42.094 2 -1.5370745430116464 0.42141522519114594 1.0 ['WDTC1|p.K80Q|1|0.39|ENSG00000142784|chr1:27283396-27283396|A/C|missense_variant'] 57418 13300 LEATFGCRMSP True PC9_epitope_Rep3 1210.5474646098999 1210.5463699358602 56.192 2 -1.5371358283932273 0.42141522519114594 1.0 ['nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 92949 20861 RPGTCKTS True NCI_RA007_Epitope_Rep5 848.41743641652 848.41632993586 87.237 2 -1.5371737085773112 0.42141522519114594 1.0 ['ENSG00000204209|ENST00000374542|DAXX', 'nc|ENSG00000204209|Q9UER7-3|DAXX'] 119255 25238 VALKPLGGL True H1975_Epitope_Rep2 866.5589386167799 866.55784993586 103.68 2 -1.5371781237309665 0.42141522519114594 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 2950 14824 AFDWGNSDQ True NCI_RA007_Epitope_Rep4 1038.4042884501798 1038.4031899358602 64.484 2 -1.5371908925509776 0.42141522519114594 1.0 ['ENSG00000204021|ENST00000404190|LIPK'] 137253 22279 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 92.844 2 -1.5372183160916748 0.42141522519114594 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 64297 18754 LPKFIKTKM True PC9_epitope_Rep2 1104.6729228232 1104.6718299358602 77.513 2 -1.5372240337167509 0.42141522519114594 1.0 ['ENST00000233813.4_1_2:217540775-217540844:-|nuORF'] 131781 9366 VTPTTIIK True H1975_Epitope_Rep1 871.53786881903 871.53676993586 40.934 2 -1.5372259102427264 0.42141522519114594 1.0 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 11637 8798 DGLIIPSVA True H1975_Epitope_Rep3 883.5014833103099 883.50038993586 38.847 2 -1.5373331244994735 0.42141522519114594 1.0 ['ENST00000510283.5_1_17:49059961-49059994:-|nuORF'] 117938 9751 TWTWLDFAM True PC9_epitope_Rep2 1169.52156713189 1169.52046993586 42.846 2 -1.537341894158505 0.42142185744744265 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2'] 58222 15369 LELGDGGDMFD True H1975_Epitope_Rep2 1167.47540478511 1167.4743099358602 64.275 2 -1.5373798868395998 0.42143995231490505 1.0 ['ENSG00000163788|ENST00000296088|SNRK', 'nc|ENSG00000163788|Q9NRH2-2|SNRK', 'ENST00000462810.1_1_3:43344695-43373803:+|nuORF', 'SNRK|p.D158Lfs*38|1|0.11|ENSG00000163788|chr3:43303671-43303674|GACA/-|frameshift_variant'] 127790 15413 VPDSLKEDR True PC9_epitope_Rep2 1057.54038800017 1057.53928993586 64.566 2 -1.5376441013281748 0.4214713096902868 1.0 ['ENST00000496389.5_1_3:112738423-112780791:+|nuORF'] 128487 8375 VPSLVASIG True PC9_epitope_Rep5 841.49091862661 841.48982993586 37.157 2 -1.5377349689222093 0.4214713096902868 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.L2566Hfs*7|1|0.14|ENSG00000129003|chr15:61918199-61918199|A/-|frameshift_variant', 'ENST00000561258.1_1_15:62276000-62283926:-|nuORF'] 55957 5900 LARQELTL True PC9_epitope_Rep2 942.5498304850599 942.54872993586 28.09 2 -1.5377363924304837 0.4214713096902868 1.0 ['ENST00000318602.11_1_12:9268543-9268723:-|nuORF'] 122215 6460 VGAPHIVP True NCI_RA007_Epitope_Rep4 788.45447354824 788.45336993586 31.447 2 -1.5378069860518861 0.4214779409236271 1.0 ['ENST00000468904.1_1_X:100184047-100184374:-|nuORF'] 61324 17190 LIRGLLARPAK True H1975_Epitope_Rep3 1206.7924607922598 1206.79187496793 71.762 1 -1.5379649061114757 0.4215406480303499 1.0 ['nc|ENSG00000115705|P07202-5|TPO', 'nc|ENSG00000115705|P07202-4|TPO', 'nc|ENSG00000115705|P07202-3|TPO', 'ENSG00000115705|ENST00000329066|TPO'] 64409 8372 LPMEQARYLEP True H1975_Epitope_Rep3 1345.6700222707295 1345.6689299358602 37.186 2 -1.538037001392694 0.4215406480303499 1.0 ['nc|ENSG00000198758|Q8TE67-2|EPS8L3', 'ENSG00000198758|ENST00000361965|EPS8L3', 'nc|ENSG00000198758|Q8TE67-3|EPS8L3'] 113025 4878 TLNASILNSLY True NCI_RA007_Epitope_Rep3 1207.64485306871 1207.64320490379 26.172 3 -1.5380545683962346 0.4215406480303499 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 52812 22241 KPAATWPP True NCI_RA007_Epitope_Rep5 866.46503823194 866.46394993586 92.697 2 -1.5380799233518276 0.4215406480303499 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 19468 7968 ELNNMQYLV True PC9_epitope_Rep1 1122.53794547202 1122.5368499358601 35.47 2 -1.538105024674737 0.4215406480303499 1.0 ['KRT2|p.D259Y|1|0.38|ENSG00000172867|chr12:52650364-52650364|C/A|missense_variant'] 61549 23502 LKGWHKRFFV True PC9_epitope_Rep2 1316.7505959802797 1316.74894490379 95.875 3 -1.538109150772624 0.4215406480303499 1.0 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'OSBPL6|p.K117Sfs*18|1|0.18|ENSG00000079156|chr2:178331581-178331581|A/-|frameshift_variant'] 118346 23831 TYMLRVLDD True PC9_epitope_Rep4 1124.55359553616 1124.5524899358602 100.08 2 -1.5381412657913776 0.4215442448970236 1.0 ['ENSG00000176194|ENST00000320477|CIDEA'] 4515 23523 AKFPRTPEN True PC9_epitope_Rep3 1058.55089311422 1058.5497899358602 95.762 2 -1.5382544264465132 0.4215442448970236 1.0 ['nc|ENSG00000164808|Q14159-2|SPIDR', 'ENSG00000164808|ENST00000297423|SPIDR', 'ENST00000517824.5_1_8:48203675-48352885:+|nuORF', 'ENST00000523814.5_1_8:48203675-48320543:+|nuORF', 'ENST00000521214.5_1_8:48191985-48612988:+|nuORF', 'ENST00000524141.5_1_8:48173550-48625457:+|nuORF', 'nc|ENSG00000164808|Q14159-3|SPIDR'] 68919 8048 LTNVVTVHRQ True PC9_epitope_Rep3 1165.65675516509 1165.65564993586 35.934 2 -1.538264052886803 0.4215442448970236 1.0 ['DCAF4|p.G316V|1|0.11|ENSG00000119599|chr14:72954425-72954425|G/T|missense_variant'] 64549 14087 LPRVFVLPALL True NCI_RA007_Epitope_Rep4 1236.7958148371997 1236.79417490379 61.468 3 -1.5382683137602668 0.4215442448970236 1.0 ['VANGL2|p.R182P|1|0.05|ENSG00000162738|chr1:160419354-160419354|G/C|missense_variant'] 127403 11094 VNENELQQDEP True NCI_RA007_Epitope_Rep1 1313.5735386032497 1313.57244993586 47.152 2 -1.5383199011047417 0.42154660677041556 1.0 ['nc|ENSG00000138182|Q96Q89-4|KIF20B', 'nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B'] 16782 6957 EEVAEWISQLG True H1975_Epitope_Rep1 1259.60338217955 1259.6022899358602 31.8 2 -1.5383339597786272 0.42154660677041556 1.0 ['nc|ENSG00000100583|Q9P1V8-2|SAMD15', 'SAMD15|p.C565Ffs*25|1|0.33|ENSG00000100583|chr14:77380387-77380387|G/-|frameshift_variant', 'ENSG00000100583|ENST00000216471|SAMD15'] 73121 22779 MRLRHKEKNQ True PC9_epitope_Rep4 1338.7302715418598 1338.72916993586 95.84 2 -1.5383918316159741 0.42154660677041556 1.0 ['nc|ENSG00000168843|Q8N475-3|FSTL5', 'nc|ENSG00000168843|Q8N475-2|FSTL5'] 30777 8168 GALSREERVE True H1975_Epitope_Rep1 1144.58364979448 1144.5830749679299 36.36 1 -1.5384153187440666 0.42154660677041556 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 9451 10395 AVVGGGESLWE True PC9_epitope_Rep1 1102.5294889632999 1102.52838993586 44.868 2 -1.5384365024390558 0.42154660677041556 1.0 ['ENST00000557600.5_1_14:94547684-94567230:+|nuORF'] 130216 9415 VSETGKKEV True PC9_epitope_Rep3 975.5236753068699 975.52256993586 41.151 2 -1.538494343126251 0.42154660677041556 1.0 ['nc|ENSG00000111783|Q33E94-4|RFX4', 'ENST00000536688.5_1_12:106995054-107126892:+|nuORF', 'ENSG00000111783|ENST00000392842|RFX4', 'nc|ENSG00000111783|Q33E94-2|RFX4', 'nc|ENSG00000111783|Q33E94-3|RFX4'] 67904 7371 LTCLTEQN True PC9_epitope_Rep1 920.42733239388 920.42622993586 33.166 2 -1.5385275667358291 0.42154660677041556 1.0 ['ENSG00000035720|ENST00000265404|STAP1'] 58745 6383 LESASSPFSA True H1975_Epitope_Rep2 994.46074069714 994.4596499358599 29.478 2 -1.5385365143824785 0.42154660677041556 1.0 ['nc|ENSG00000115459|Q96FG2-6|ELMOD3'] 117247 10764 TVLSTIRFFI True H1975_Epitope_Rep1 1195.69649471875 1195.69538993586 46.365 2 -1.538583867115512 0.42154660677041556 1.0 ['ENST00000552690.1_1_12:106715380-106717765:+|nuORF'] 95612 4005 RWYWCRDSTTR True PC9_epitope_Rep1 1528.6993653363998 1528.69771490379 20.309 3 -1.5387554607187275 0.4215876144528609 1.0 ['ENST00000399627.3_1_22:50905837-50906184:-|nuORF'] 82246 7391 PPEPERPRF True PC9_epitope_Rep4 1123.5774422152297 1123.5763499358602 35.775 2 -1.5387849789295358 0.4215942427576091 1.0 ['ENSG00000155269|ENST00000382487|GPR78', 'GPR78|p.R159S|1|0.58|ENSG00000155269|chr4:8581457-8581457|C/A|missense_variant'] 91482 19744 RHRRRRKQR True H1975_Epitope_Rep1 1347.8296832030298 1347.82804490379 82.176 3 -1.5388133854590904 0.4216008709104452 1.0 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132813-7133230:-|nuORF', 'ENST00000574642.5_1_17:7132550-7133686:-|nuORF'] 36765 21002 GVKMWHLVK True PC9_epitope_Rep6 1096.62155595668 1096.62097496793 93.609 1 -1.53882235576819 0.42160749891137445 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'PLXNA4|p.G1706Afs*40|1|0.25|ENSG00000221866|chr7:132145227-132145227|C/-|frameshift_variant', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4', 'PLXNA4|p.A1683Pfs*63|1|0.33|ENSG00000221866|chr7:132146518-132146518|C/-|frameshift_variant'] 25636 13687 FENYYRKQRKK True NCI_RA007_Epitope_Rep2 1558.8368447853798 1558.8357499358601 57.882 2 -1.5390343599715275 0.4216599631017452 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 59665 15545 LGAKKLCP True PC9_epitope_Rep6 828.4891448047999 828.48804993586 71.987 2 -1.5390684997213127 0.42168950818169315 1.0 ['ENST00000475378.5_1_1:45097966-45116444:+|nuORF', 'nc|ENSG00000187147|Q5VTB9-3|RNF220', 'ENSG00000187147|ENST00000361799|RNF220'] 14778 8252 DVNRIYKLSS True H1975_Epitope_Rep1 1193.6404363946099 1193.6393299358601 36.681 2 -1.5392349317935634 0.42171352627116704 1.0 ['PLXNA4|p.A67D|1|0.39|ENSG00000221866|chr7:132508494-132508494|G/T|missense_variant'] 58014 13623 LEHLRITV True PC9_epitope_Rep3 979.58146496651 979.58036993586 57.465 2 -1.53925680645378 0.42171352627116704 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 114750 19645 TQKRALGKS True H1975_Epitope_Rep1 987.5825275956698 987.58142993586 81.779 2 -1.5393644105065585 0.42171352627116704 1.0 ['ENST00000274071.6_1_4:157892080-157892299:-|nuORF'] 46335 4879 ISQTKVAEL True NCI_RA007_Epitope_Rep3 987.5600608155898 987.55896993586 26.176 2 -1.5394440921264592 0.42171352627116704 1.0 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4'] 80826 24010 PHPPLAIA True NCI_RA007_Epitope_Rep3 814.47012361238 814.46957496793 104.01 1 -1.5394579010210467 0.42171352627116704 1.0 ['ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 73107 20345 MRIYRRYIY True H1975_Epitope_Rep2 1332.7124962194 1332.71086490379 84.31 3 -1.5395251448537735 0.42171352627116704 1.0 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 59412 21467 LFLRRRLMF True PC9_epitope_Rep6 1250.7434024248598 1250.74174490379 95.449 3 -1.5396033460884213 0.42171352627116704 1.0 ['ENSG00000171714|ENST00000324559|ANO5'] 47510 14026 IVRFWAKHRWC True H1975_Epitope_Rep1 1500.7924778755998 1500.79138993586 59.115 2 -1.5396306096845063 0.42171352627116704 1.0 ['SPATA31A6|p.G810C|1|0.61|ENSG00000185775|chr9:42188130-42188130|G/T|missense_variant'] 130569 24178 VSRRAAQL True PC9_epitope_Rep2 899.5300980999898 899.52900993586 98.526 2 -1.5396347364736 0.42171352627116704 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 87542 19863 QQKMWFTENQR True H1975_Epitope_Rep3 1494.7037820105 1494.70268993586 83.161 2 -1.5396551928071058 0.42171352627116704 1.0 ['ENSG00000177354|ENST00000374144|C10orf71'] 52949 23556 KPGPLRRAH True PC9_epitope_Rep1 1030.6148307834599 1030.6137299358602 95.399 2 -1.5397064284561546 0.42171352627116704 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 34242 23023 GNQGRKMS True PC9_epitope_Rep1 876.4235844261199 876.42248993586 93.356 2 -1.5397195885277222 0.42171352627116704 1.0 ['ENST00000369936.2_1_1:109730792-109745631:+|nuORF', 'ENST00000369938.5_1_1:109730226-109745631:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-3|ELAPOR1', 'ENST00000527996.5_1_1:109656894-109745573:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-2|ELAPOR1', 'nc|ENSG00000116299|Q6UXG2-4|ELAPOR1', 'ENSG00000116299|ENST00000369939|ELAPOR1'] 44615 17239 ILRIPSAQGRQ True NCI_RA007_Epitope_Rep5 1237.72550343125 1237.7244099358602 73.083 2 -1.5397420262781565 0.42171352627116704 1.0 ['OR6Y1|p.A242Hfs*9|1|0.23|ENSG00000197532|chr1:158547382-158547382|C/-|frameshift_variant', 'ENSG00000197532|ENST00000641622|OR6Y1'] 80819 23214 PHPAAIAL True PC9_epitope_Rep6 788.45447354824 788.4539249679301 102.39 1 -1.5397880346683888 0.42171352627116704 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 36587 12514 GVHPAPGF True PC9_epitope_Rep3 780.39187329168 780.39076993586 53.159 2 -1.5400432437928833 0.42175631551813025 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 129557 9822 VRLLADVTH True NCI_RA007_Epitope_Rep1 1022.58727862294 1022.5867749679301 42.21 1 -1.5400488405919401 0.42175631551813025 1.0 ['ENSG00000162378|ENST00000294353|ZYG11B'] 133396 16510 VVVLLSAE True NCI_RA007_Epitope_Rep4 828.49566965388 828.49456993586 71.569 2 -1.5401034926798174 0.42175631551813025 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant'] 122921 24792 VGHSAGHP True H1975_Epitope_Rep1 760.36163579256 760.36052993586 102.68 2 -1.5401292488972407 0.4217581083093702 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 33905 15964 GLQMASRYTV True PC9_epitope_Rep1 1124.5648289261999 1124.56372993586 66.212 2 -1.5401480997452088 0.4217581083093702 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 105221 5827 SRIDCFSEV True H1975_Epitope_Rep2 1054.47534521546 1054.4742499358601 27.404 2 -1.5402320655252892 0.4217647328384199 1.0 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000490753.1_1_20:2637050-2637903:+|nuORF', 'ENST00000466447.5_1_20:2636822-2638033:+|nuORF', 'ENST00000492135.5_1_20:2636822-2638937:+|nuORF', 'ENST00000471023.1_1_20:2637149-2637577:+|nuORF'] 74073 10748 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 46.37 1 -1.5402570677792562 0.42177314958014 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 29064 18176 FTHDSGLITIN True NCI_RA007_Epitope_Rep3 1216.6088019131598 1216.6077099358602 79.616 2 -1.540304133331856 0.42177314958014 1.0 ['ENSG00000006634|ENST00000265728|DBF4'] 131785 18447 VTPYKERNCDK True PC9_epitope_Rep2 1351.6554348357497 1351.65432993586 76.288 2 -1.5403294918729402 0.42177314958014 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 79926 8741 PERIFFRWHYQ True NCI_RA007_Epitope_Rep2 1577.78916631697 1577.7880699358602 38.647 2 -1.5403600911011754 0.42177977363332264 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 21320 23603 EREVVVRQLQQ True PC9_epitope_Rep2 1382.7630111387798 1382.7613649037899 96.259 3 -1.540450127873464 0.4218177236070381 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26', 'nc|ENSG00000107890|Q9UPS8-2|ANKRD26'] 88479 8800 QSSYIREQYVL True H1975_Epitope_Rep1 1384.69867954672 1384.6975899358602 38.775 2 -1.5404636306004582 0.4218177236070381 1.0 ['ENST00000461141.5_1_3:183952309-183959823:+|nuORF', 'ENSG00000145198|ENST00000691901|VWA5B2'] 4599 19948 AKRKKSKKGNP True NCI_RA007_Epitope_Rep2 1240.7727879768397 1240.77115490379 82.594 3 -1.5404704252434605 0.4218177236070381 1.0 ['ENST00000426819.5_1_21:34911496-34915075:-|nuORF'] 96509 7365 SADKYVKIWDI True NCI_RA007_Epitope_Rep2 1336.7027022979998 1336.70160993586 33.272 2 -1.540486740494571 0.4218177236070381 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 123440 4653 VGNNGSGKSA True PC9_epitope_Rep4 889.4253582479299 889.42426993586 24.421 2 -1.5405342024447053 0.4218358019175917 1.0 ['ENSG00000163029|ENST00000448223|SMC6'] 47609 4252 IVWPWNDVP True H1975_Epitope_Rep2 1124.5654805492 1124.5638449037901 21.465 3 -1.5406538776160408 0.42184242479781897 1.0 ['ENST00000398632.3_1_21:42774955-42775423:+|nuORF'] 76129 23976 NMRDSSDI True H1975_Epitope_Rep2 936.39709489476 936.39598993586 98.745 2 -1.5407781005526937 0.4218671248568156 1.0 ['ENSG00000188419|ENST00000357749|CHM'] 59296 6998 LFGSLGHK True PC9_epitope_Rep4 857.4759372688101 857.47484993586 34.164 2 -1.5408099365986707 0.4218671248568156 1.0 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'SLC24A4|p.P432Rfs*91|1|0.22|ENSG00000140090|chr14:92482717-92482736|GCCCCTCATCTTCCTCCTGT/-|frameshift_variant'] 95475 7312 RWLWWQPWWWK True H1975_Epitope_Rep3 1756.8779217517197 1756.87682993586 33.098 2 -1.540879348453464 0.42189665639568846 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 132634 23254 VVFLKQLA True PC9_epitope_Rep6 916.5745886809199 916.57348993586 102.55 2 -1.5410023955489784 0.4219099000034363 1.0 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF', 'ENST00000414898.1_1_1:241995599-241995785:+|nuORF'] 2900 6989 AEWDQKEL True PC9_epitope_Rep5 1017.4767251144499 1017.47562993586 31.85 2 -1.541058127030699 0.4219099000034363 1.0 ['ENST00000534433.5_1_11:134123494-134128911:+|nuORF', 'ENST00000528325.5_1_11:134126509-134129738:+|nuORF', 'ENST00000531338.5_1_11:134126482-134132106:+|nuORF', 'ENSG00000151498|ENST00000281182|ACAD8'] 66515 8531 LSHLRHLG True NCI_RA007_Epitope_Rep3 931.5351834804301 931.53408993586 40.629 2 -1.5412737126892508 0.42196412617689505 1.0 ['ENST00000533407.6_1_11:6422737-6440257:-|nuORF'] 56894 11565 LDPWQNPVP True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 49.363 2 -1.5413122768302858 0.42196412617689505 1.0 ['ENST00000372007.9_2_X:110339616-110346458:+|nuORF'] 84716 4011 QDPFYPRGP True NCI_RA007_Epitope_Rep2 1075.5086939490698 1075.50758993586 20.24 2 -1.5413942176622752 0.42196412617689505 1.0 ['ENSG00000133142|ENST00000472484|TCEAL4', 'nc|ENSG00000133142|Q96EI5-2|TCEAL4', 'ENSG00000184905|ENST00000372780|TCEAL2'] 98502 11772 SFLEKCVE True NCI_RA007_Epitope_Rep3 953.4528188657299 953.45172993586 53.416 2 -1.5416556027556458 0.4220051084105513 1.0 ['ENST00000470597.5_1_5:64558740-64769500:-|nuORF'] 93022 12599 RPLEDIEDSW True H1975_Epitope_Rep2 1258.5829810881398 1258.58188993586 53.559 2 -1.541677639460844 0.422011728593027 1.0 ['ENSG00000215529|ENST00000400522|EFCAB8'] 58456 20348 LEPQGVFSLFP True PC9_epitope_Rep4 1232.6441247927198 1232.64302993586 86.413 2 -1.5417421372612605 0.42201834862385323 1.0 ['ENST00000570265.5_1_15:36871929-37039277:+|nuORF', 'ENST00000567573.5_1_15:36871929-36940867:+|nuORF'] 119336 9532 VAPAHAPLGR True PC9_epitope_Rep5 987.5613982282699 987.56030993586 41.623 2 -1.5418204417572758 0.4220219211343099 1.0 ['ENST00000556818.1_1_14:64970443-64970746:+|nuORF'] 63587 5135 LMGLLEDYFVP True NCI_RA007_Epitope_Rep2 1295.64716156783 1295.64550490379 24.596 3 -1.5418689538577455 0.4220219211343099 1.0 ['nc|ENSG00000188677|Q9HBI1-3|PARVB', 'ENSG00000188677|ENST00000338758|PARVB', 'nc|ENSG00000188677|Q9HBI1-2|PARVB'] 249 10340 AAGAQFPNYSP True PC9_epitope_Rep5 1121.5141732523298 1121.5130699358601 44.756 2 -1.5418939157511407 0.4220219211343099 1.0 ['nc|ENSG00000156925|O60481-2|ZIC3', 'ENSG00000156925|ENST00000287538|ZIC3'] 124217 8888 VGTEQTDRRWR True H1975_Epitope_Rep1 1402.70655889182 1402.70546993586 39.101 2 -1.541901408006471 0.4220219211343099 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3', 'ENSG00000274600|ENST00000620804|RIMBP3B', 'ENSG00000183246|ENST00000433039|RIMBP3C'] 84588 17031 QCSDCRPRVT True PC9_epitope_Rep3 1163.51756146395 1163.5164699358602 70.666 2 -1.5419652789728107 0.4220550172931125 1.0 ['ENST00000357115.7_2_4:151935804-151936634:-|nuORF'] 108166 7841 SYFSNAPV True PC9_epitope_Rep5 883.4075829254699 883.40648993586 35.104 2 -1.5419660890979567 0.4220550172931125 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 123974 20499 VGSAQIRQV True PC9_epitope_Rep4 956.5403284305199 956.53922993586 86.999 2 -1.5419983064061822 0.4220550172931125 1.0 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'ENST00000533478.5_1_16:81157348-81174942:-|nuORF'] 30899 17997 GAPVQALRPRR True NCI_RA007_Epitope_Rep4 1219.7261721375899 1219.7250699358601 77.872 2 -1.5419989440262412 0.4220550172931125 1.0 ['ENST00000260324.11_1_15:45927092-45951106:+|nuORF'] 136816 12981 YAALFTAA True PC9_epitope_Rep3 826.42250471362 826.42140993586 54.959 2 -1.5420108480979644 0.4220550172931125 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-2|ADGRV1'] 8084 19960 ATDTYILK True PC9_epitope_Rep5 923.4963979298699 923.49530993586 81.83 2 -1.5421115205910156 0.42206342117016526 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 128976 20509 VQKMIFSL True PC9_epitope_Rep6 964.5415743004799 964.5410249679301 91.617 1 -1.5421130417854603 0.42206342117016526 1.0 ['ENSG00000187857|ENST00000641576|OR6C75'] 72521 3679 MLHCQPAP True PC9_epitope_Rep1 895.4044292046699 895.40332993586 19.069 2 -1.5421762361192588 0.42206342117016526 1.0 ['ENST00000156825.5_1_19:1577339-1577516:-|nuORF'] 119506 10189 VASALHTSS True H1975_Epitope_Rep3 871.4399456829102 871.43884993586 44.237 2 -1.54241180839853 0.42207003962346257 1.0 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 88188 25044 QRWHWQKKV True PC9_epitope_Rep6 1294.70470841702 1294.7036099358602 111.34 2 -1.5424893890083577 0.42208327607530577 1.0 ['nc|ENSG00000117009|O15229-3|KMO', 'nc|ENSG00000117009|O15229-2|KMO', 'ENSG00000117009|ENST00000366559|KMO'] 96393 14949 RYYNKYINVKK True NCI_RA007_Epitope_Rep2 1487.8248831193498 1487.82378993586 62.829 2 -1.5424895716396056 0.42208327607530577 1.0 ['nc|ENSG00000241468|P56134-2|ATP5MF', 'ENSG00000241468|ENST00000292475|ATP5MF', 'ENST00000491560.1_1_7:99055952-99057898:-|nuORF', 'ENST00000481899.1_1_7:99056719-99057898:-|nuORF'] 124275 14354 VGTLPLGL True PC9_epitope_Rep5 768.47454028648 768.47344993586 60.213 2 -1.542546372820656 0.42208506057760575 1.0 ['nc|ENSG00000170615|P58743-3|SLC26A5', 'nc|ENSG00000170615|P58743-2|SLC26A5', 'nc|ENSG00000170615|P58743-5|SLC26A5', 'nc|ENSG00000170615|P58743-6|SLC26A5', 'ENSG00000170615|ENST00000306312|SLC26A5'] 30217 7774 FYSPAQTA True PC9_epitope_Rep1 883.40758292547 883.40648993586 34.724 2 -1.5425762679052095 0.42208506057760575 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549', 'nc|ENSG00000122778|Q9HCM3-3|KIAA1549', 'nc|ENSG00000122778|Q9HCM3-4|KIAA1549'] 63023 21286 LLPTLVPGV True PC9_epitope_Rep3 907.5742543277498 907.57314993586 87.171 2 -1.542629294471376 0.42211458082838066 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5'] 121913 17984 VFRPEQDPVP True PC9_epitope_Rep2 1182.6033226099 1182.6022299358601 74.478 2 -1.542705294879774 0.42214410040307804 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 57470 12084 LEDAFTIAE True H1975_Epitope_Rep3 1007.48114178855 1007.48004993586 51.645 2 -1.5427932148470698 0.4221507174020085 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.W1342Lfs*5|1|0.44|ENSG00000131018|chr6:152441254-152441255|-/A|frameshift_variant'] 127908 7251 VPGSGESR True H1975_Epitope_Rep3 787.38243080679 787.38132993586 32.863 2 -1.5428128894643245 0.42215733424939883 1.0 ['ENST00000371600.7_1_9:139937867-139938101:-|nuORF'] 100478 8540 SLAPQTFRGT True NCI_RA007_Epitope_Rep3 1076.56145779792 1076.56036993586 40.664 2 -1.5429483481294757 0.4221675158871014 1.0 ['ENST00000520810.5_1_8:42188602-42189049:+|nuORF'] 132276 14719 VTVVTGNRTI True PC9_epitope_Rep2 1058.60840799034 1058.60730993586 61.885 2 -1.5429851456020378 0.4221675158871014 1.0 ['ENSG00000187857|ENST00000641576|OR6C75', 'OR6C75|p.S91Y|1|0.11|ENSG00000187857|chr12:55365382-55365382|C/A|missense_variant'] 13172 13081 DLRSGVYP True PC9_epitope_Rep3 905.4606811274898 905.45958993586 55.34 2 -1.5429917620827815 0.4221675158871014 1.0 ['ENST00000596053.1_19:21265151-21266852:+|nuORF'] 123632 16033 VGQGVQAA True NCI_RA007_Epitope_Rep3 728.3817025307999 728.38115496793 70.75 1 -1.5430261424133076 0.4221675158871014 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 74159 19910 NEDNSKRDIS True PC9_epitope_Rep4 1176.53709352488 1176.53598993586 84.718 2 -1.5430376093593463 0.4221675158871014 1.0 ['nc|ENSG00000140265|Q8IWY8-4|ZSCAN29', 'ENSG00000140265|ENST00000684362|ZSCAN29', 'ENST00000566849.5_1_15:43653273-43656590:-|nuORF', 'nc|ENSG00000140265|Q8IWY8-2|ZSCAN29'] 37335 5892 GVSFKLEEK True NCI_RA007_Epitope_Rep4 1035.5600608155898 1035.5589699358602 29.286 2 -1.5431780679849756 0.42219397977993794 1.0 ['ENSG00000176422|ENST00000338146|SPRYD4'] 31066 18212 GATNVDLK True NCI_RA007_Epitope_Rep2 816.4341320264799 816.4335849679301 75.599 1 -1.5432081685461494 0.42219397977993794 1.0 ['ENST00000579700.1_1_7:76669357-76673036:+|nuORF'] 65439 19554 LRHLLATQQK True H1975_Epitope_Rep3 1206.7196897748202 1206.7180349037899 81.933 3 -1.5432478362717719 0.42219397977993794 1.0 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF'] 22208 7245 ESWSEFYED True NCI_RA007_Epitope_Rep3 1190.44039917538 1190.4393099358601 35.608 2 -1.5433357402168304 0.42219397977993794 1.0 ['RBM26|p.H275Y|1|0.07|ENSG00000139746|chr13:79368802-79368802|G/A|missense_variant'] 79762 17345 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 72.013 2 -1.5434833593272332 0.4222005953743989 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 97221 5302 SDYSFSVIAMS True PC9_epitope_Rep3 1205.52744035797 1205.52634993586 25.471 2 -1.5435926938836046 0.42221916929981224 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 107660 9969 SVQPDPASPI True NCI_RA007_Epitope_Rep5 1009.5080252427299 1009.50692993586 44.988 2 -1.5437627930836662 0.42221916929981224 1.0 ['ENSG00000135749|ENST00000258229|PCNX2', 'nc|ENSG00000135749|A6NKB5-2|PCNX2', 'ENST00000324142.4_1_1:233337898-233388268:-|nuORF', 'nc|ENSG00000135749|A6NKB5-5|PCNX2', 'ENST00000475463.6_1_1:233201380-233353905:-|nuORF'] 47410 14547 IVLGRTNL True PC9_epitope_Rep4 884.5443511818 884.54324993586 63.868 2 -1.5439338625403625 0.42221916929981224 1.0 ['ENSG00000103742|ENST00000352385|IGDCC4'] 139084 14051 YLDEERTV True PC9_epitope_Rep2 1023.48728979815 1023.4861899358599 59.326 2 -1.5439851386270005 0.42221916929981224 1.0 ['CON__Q95121', 'ENSG00000132386|ENST00000254722|SERPINF1'] 37561 23611 GVVMLIHVTV True NCI_RA007_Epitope_Rep1 1066.62088725034 1066.62037496793 97.386 1 -1.544021765566272 0.42221916929981224 1.0 ['ENST00000592447.5_1_18:11886458-11886668:-|nuORF', 'ENST00000589731.5_1_18:11886458-11897263:-|nuORF'] 4603 9793 AKSPEYFLLFF True PC9_epitope_Rep5 1360.7067250492798 1360.7050649037901 42.638 3 -1.5440563453292846 0.42221916929981224 1.0 ['ENST00000523854.5_1_8:134511431-134511521:-|nuORF'] 78520 24445 NYPNIFRIS True NCI_RA007_Epitope_Rep1 1122.5821932425 1122.58054490379 101.29 3 -1.5440742389596518 0.42221916929981224 1.0 ['ENSG00000183862|ENST00000329903|CNGA2', 'CNGA2|p.G533Afs*28|1|0.31|ENSG00000183862|chrX:151744099-151744099|G/-|frameshift_variant', 'ENSG00000198515|ENST00000514170|CNGA1'] 136467 18029 WVKAIGRKA True PC9_epitope_Rep6 1027.6290838652699 1027.6279899358601 81.978 2 -1.5440932910297767 0.42221916929981224 1.0 ['ENSG00000136197|ENST00000350427|C7orf25', 'nc|nan|Q9BPX7-2|C7orf25'] 19645 10069 ELRAFLRHYEA True H1975_Epitope_Rep1 1403.73098273451 1403.72988993586 43.671 2 -1.5441225687215432 0.4222438465941614 1.0 ['ENSG00000184261|ENST00000327876|KCNK12'] 78100 10657 NVYVSGGN True H1975_Epitope_Rep3 808.3715317699199 808.3709849679301 46.066 1 -1.5441374173487734 0.4222438465941614 1.0 ['ENST00000345365.10_1_17:33427675-33427975:-|nuORF'] 10373 3940 CGKAFGCKSNL True NCI_RA007_Epitope_Rep1 1126.5263352425 1126.5252299358601 19.361 2 -1.5442142825081853 0.4222570748237018 1.0 ['ENSG00000177932|ENST00000315475|ZNF354C'] 45948 19048 ISENRRVR True PC9_epitope_Rep1 1028.5839245779998 1028.5828299358602 78.059 2 -1.5442936752866674 0.4222570748237018 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 121949 8443 VFSVPEDVAP True NCI_RA007_Epitope_Rep2 1058.5284263341398 1058.52732993586 37.483 2 -1.5445249966615309 0.4222751365150596 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 84092 20512 PWLFIPLP True PC9_epitope_Rep6 981.5687750244899 981.56766993586 91.629 2 -1.5446195888900272 0.42228352946563485 1.0 ['ENST00000479872.5_1_1:165879160-165879211:+|nuORF'] 101675 9589 SLLWTDLSPPP True NCI_RA007_Epitope_Rep2 1224.63903941228 1224.6379499358602 41.914 2 -1.5446214596757883 0.42228352946563485 1.0 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENST00000448120.6_1_12:3049550-3049889:+|nuORF'] 46792 24639 ITGDLIATR True H1975_Epitope_Rep2 958.54474510462 958.54364993586 101.33 2 -1.5446943331298475 0.42228352946563485 1.0 ['ENST00000345046.10_1_X:152966127-152966343:-|nuORF'] 69816 14415 LVGNWLDLP True H1975_Epitope_Rep3 1025.5545815123298 1025.5534899358602 60.801 2 -1.5447640300655867 0.42228403328640274 1.0 ['ENSG00000197852|ENST00000357260|INKA2'] 40250 9071 HQKCRQYCPVT True NCI_RA007_Epitope_Rep3 1361.63325992253 1361.63216993586 42.771 2 -1.5447889170349294 0.42228403328640274 1.0 ['RFTN1|p.Y296C|1|0.31|ENSG00000131378|chr3:16370219-16370219|T/C|missense_variant'] 83409 6307 PTLEGQHSK True NCI_RA007_Epitope_Rep4 995.50360856863 995.50250993586 30.864 2 -1.5448448964817394 0.42228403328640274 1.0 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 47539 25138 IVSRIQRYC True H1975_Epitope_Rep3 1136.6124478249599 1136.61134993586 104.57 2 -1.54485899908688 0.42228403328640274 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 45003 9109 IPDFLGRCQSD True NCI_RA007_Epitope_Rep1 1249.57612188589 1249.5750299358601 39.434 2 -1.5448925424747806 0.42228403328640274 1.0 ['ENST00000500085.2_1_4:187509748-187518366:-|nuORF'] 80703 22395 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 93.308 2 -1.5449405350083425 0.42228403328640274 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 66778 10879 LSLRAPETVP True PC9_epitope_Rep1 1081.6131590176099 1081.61206993586 46.73 2 -1.5449731378439733 0.42228403328640274 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.L1447Qfs*57|1|0.15|ENSG00000047936|chr6:117344244-117344244|A/-|frameshift_variant', 'ROS1|p.F1354Lfs*35|1|0.3|ENSG00000047936|chr6:117356708-117356708|A/-|frameshift_variant'] 116500 23421 TTQLSSKS True NCI_RA007_Epitope_Rep1 850.43961132974 850.43850993586 96.463 2 -1.5450656751795895 0.42228581239626856 1.0 ['ENSG00000197563|ENST00000640252|PIGN', 'ENST00000587942.1_1_18:59713091-59751818:-|nuORF'] 35346 14927 GRVAHQGP True PC9_epitope_Rep2 820.4303840587199 820.42928993586 62.678 2 -1.5451058808938785 0.42228581239626856 1.0 ['ENST00000573080.1_1_17:79658404-79658602:+|nuORF'] 127135 15499 VLTSRALI True PC9_epitope_Rep2 871.5491022090699 871.54800993586 64.89 2 -1.5451307635661236 0.42229242497081243 1.0 ['nc|ENSG00000152128|Q8TC26-3|TMEM163', 'ENST00000476823.1_1_2:135214289-135223802:-|nuORF', 'ENSG00000152128|ENST00000281924|TMEM163'] 48347 5590 IYSSMVSQLY True NCI_RA007_Epitope_Rep1 1189.56891124713 1189.5678099358602 25.808 2 -1.5451894747391115 0.42229598260272405 1.0 ['nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.F736Cfs*26|1|0.13|ENSG00000041515|chr13:108964805-108964806|-/GTGTAGAGCTCAGCTCGCGCTGGTGTGGGCGCAA|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16', 'MYO16|p.P470H|1|0.34|ENSG00000041515|chr13:108883108-108883108|C/A|missense_variant'] 29652 25484 FVKKHPLM True PC9_epitope_Rep2 998.5735431351 998.57244993586 103.71 2 -1.5451964638788553 0.42229598260272405 1.0 ['ENSG00000168758|ENST00000305476|SEMA4C'] 53844 25345 KTGKKGKG True PC9_epitope_Rep4 802.5024863698198 802.50138993586 106.34 2 -1.5452027280643297 0.42229598260272405 1.0 ['ENSG00000137077|ENST00000259607|CCL21'] 75393 3801 NITVECVPVDL True NCI_RA007_Epitope_Rep2 1200.6060250318399 1200.6049299358601 19.421 2 -1.5452211748155926 0.42229598260272405 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 62872 21666 LLNEFDRII True PC9_epitope_Rep2 1131.62880908175 1131.6277099358601 88.815 2 -1.545312695253033 0.4223109849612013 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 2138 5366 AELPFPPCCP True PC9_epitope_Rep1 1072.4721744113199 1072.4710699358602 25.476 2 -1.5453580668048041 0.4223109849612013 1.0 ['ENST00000439955.1_1_2:118593974-118594413:+|nuORF'] 90277 22356 REEKVKALL True H1975_Epitope_Rep1 1084.6604435631998 1084.65934993586 93.02 2 -1.5453592784452477 0.4223109849612013 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'nc|ENSG00000007174|Q9NYC9-3|DNAH9'] 124552 16375 VGVPTRAR True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50808496793 69.74 1 -1.5453856397839962 0.4223109849612013 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 62687 19273 LLLLLLLL True PC9_epitope_Rep4 922.68307650074 922.68196993586 82.237 2 -1.5455920027517969 0.42237482117310443 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'SEMA6C|p.M8I|1|0.48|ENSG00000143434|chr1:151142598-151142598|C/G|missense_variant', 'EIF2AK3|p.E232Rfs*74|1|0.4|ENSG00000172071|chr2:88593345-88593345|C/-|frameshift_variant', 'ENSG00000184709|ENST00000371542|LRRC26', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'PCDHA8|p.W12G|1|0.22|ENSG00000204962|chr5:140841355-140841355|T/G|missense_variant', 'ENSG00000117899|ENST00000261758|MESD', 'ENSG00000182685|ENST00000328540|BRICD5', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000183971|ENST00000566435|NPW', 'ENSG00000070031|ENST00000176195|SCT', 'ENSG00000178473|ENST00000380433|UCN3', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'nc|ENSG00000117899|Q14696-2|MESD', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000121316|ENST00000240617|PLBD1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 55317 4900 LAEDVEEIN True PC9_epitope_Rep6 1030.4818700645399 1030.48076993586 26.394 2 -1.5456309714521244 0.42238143197216627 1.0 ['ATP2B1|p.D1094N|1|0.21|ENSG00000070961|chr12:89599188-89599188|C/T|missense_variant'] 99287 24582 SHQVKDLQRRL True PC9_epitope_Rep4 1378.7793299092598 1378.77822993586 103.04 2 -1.5456616955805151 0.4223880426199114 1.0 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158', 'nc|ENSG00000163749|Q5M9N0-3|CCDC158', 'nc|ENSG00000163749|Q5M9N0-2|CCDC158'] 104602 21138 SQRQIRKSR True PC9_epitope_Rep6 1157.67413656473 1157.67302993586 94.154 2 -1.5456926979437298 0.42239465311634505 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 69224 2691 LTSQREGRW True NCI_RA007_Epitope_Rep2 1131.5785048443897 1131.57685490379 14.693 3 -1.5457140164797145 0.42240126346147244 1.0 ['ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF', 'ENST00000479818.5_1_22:50717015-50717261:-|nuORF'] 79314 3345 PAQYCHAV True PC9_epitope_Rep6 887.3959726959499 887.39486993586 18.979 2 -1.5458237796970746 0.4224210935890687 1.0 ['nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP'] 69476 9075 LVALLADFSQ True H1975_Epitope_Rep3 1075.59136094387 1075.59026993586 39.892 2 -1.5458377992900123 0.4224210935890687 1.0 ['FRMPD4|p.H466Q|1|0.2|ENSG00000169933|chrX:12707579-12707579|C/G|missense_variant'] 83642 6708 PVDVDKDS True NCI_RA007_Epitope_Rep5 873.40797684829 873.40686993586 32.474 2 -1.5458888977628964 0.4224210935890687 1.0 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 106941 19836 SVDSSWISW True PC9_epitope_Rep3 1065.4767251144501 1065.47562993586 81.534 2 -1.546026083514087 0.4224391472025451 1.0 ['ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENSG00000147457|ENST00000397677|CHMP7', 'CHMP7|p.A112S|1|0.29|ENSG00000147457|chr8:23249244-23249244|G/T|missense_variant'] 97234 4429 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 24.182 2 -1.5460889190893767 0.4224497968991361 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 91562 3616 RIILKIPI True PC9_epitope_Rep2 964.6797224558 964.67862993586 19.184 2 -1.546104342322794 0.4224497968991361 1.0 ['ENST00000260746.5_1_10:104449690-104459203:-|nuORF'] 15787 24175 EDALLRRLRG True PC9_epitope_Rep4 1197.6942033029698 1197.69256490379 101.46 3 -1.546176836679872 0.4224497968991361 1.0 ['ENSG00000011260|ENST00000225298|UTP18'] 131786 17466 VTPYRLHVL True PC9_epitope_Rep4 1096.6393141958001 1096.63820993586 75.18 2 -1.5462005651774031 0.4224497968991361 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 127181 5204 VLVIKARKLPP True PC9_epitope_Rep1 1232.8332629750798 1232.83216993586 24.867 2 -1.546283503044437 0.4224497968991361 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 124653 14036 VGYALDYN True PC9_epitope_Rep4 913.41814760917 913.41704993586 61.9 2 -1.5463063559390586 0.4224497968991361 1.0 ['ENSG00000165704|ENST00000298556|HPRT1', 'ENSG00000099256|ENST00000320152|PRTFDC1'] 66782 12384 LSLRQVSHPRR True H1975_Epitope_Rep3 1347.7847496428699 1347.78364993586 52.821 2 -1.5463409629886633 0.4224497968991361 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 68358 3761 LTEPDSSSPL True NCI_RA007_Epitope_Rep2 1044.49752012868 1044.49642993586 19.27 2 -1.5463560306125161 0.4224497968991361 1.0 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 62694 22544 LLLLLLSPP True NCI_RA007_Epitope_Rep1 977.65250464845 977.65195496793 92.396 1 -1.546417075177877 0.4224497968991361 1.0 ['ENST00000479510.2_1_6:33387852-33406697:+|nuORF', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P1343Lfs*68|1|0.26|ENSG00000198753|chrX:153774974-153774974|C/-|frameshift_variant'] 218 4917 AAFLPAQTHRP True NCI_RA007_Epitope_Rep3 1207.6461904813898 1207.6450899358601 26.332 2 -1.546428005955938 0.4224497968991361 1.0 ['ENST00000573070.5_1_17:7297840-7298119:-|nuORF'] 83811 19520 PVLITRPLE True PC9_epitope_Rep6 1036.62808080576 1036.6269899358601 87.747 2 -1.5464610909606094 0.4224497968991361 1.0 ['MYBPC3|p.G532Afs*23|1|0.2|ENSG00000134571|chr11:47342607-47342607|C/-|frameshift_variant', 'nc|ENSG00000134571|Q14896-2|MYBPC3', 'ENSG00000134571|ENST00000545968|MYBPC3'] 31146 8919 GAVSSSPREL True PC9_epitope_Rep4 1001.51417325233 1001.51306993586 41.848 2 -1.546507394488319 0.4224497968991361 1.0 ['ENSG00000119917|ENST00000371818|IFIT3'] 95455 19722 RWLEKEERFLK True PC9_epitope_Rep1 1532.8463468399198 1532.84524993586 80.687 2 -1.5466868298994738 0.4225176473280172 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 117554 12357 TVSHKFRR True PC9_epitope_Rep3 1029.5831963020098 1029.58208993586 52.559 2 -1.5467114938186288 0.4225176473280172 1.0 ['nc|ENSG00000081014|Q9UPM8-2|AP4E1', 'ENSG00000081014|ENST00000261842|AP4E1'] 123660 5087 VGQPSHPV True PC9_epitope_Rep2 819.4239016959499 819.42280993586 24.945 2 -1.5467277233101404 0.4225176473280172 1.0 ['ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 30909 19586 GAQKPPGD True PC9_epitope_Rep3 768.37661715036 768.37552993586 80.574 2 -1.5468397099407587 0.4225176473280172 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 140160 21760 YQSWVIAA True NCI_RA007_Epitope_Rep5 936.4705175351997 936.46942993586 90.815 2 -1.5468440349093437 0.4225176473280172 1.0 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.Q1205H|1|0.09|ENSG00000196455|chr3:130681584-130681584|C/A|missense_variant', 'PIK3R4|p.G1206C|1|0.09|ENSG00000196455|chr3:130681583-130681583|C/A|missense_variant', 'ENST00000512677.1_1_3:130399450-130405071:-|nuORF', 'ENST00000512362.5_1_3:130399450-130405229:-|nuORF'] 101833 11679 SLPGTPAAW True PC9_epitope_Rep1 898.4548674710599 898.45376993586 49.8 2 -1.5469315484593367 0.4225176473280172 1.0 ['ENST00000265316.7_1_2:220083495-220083603:-|nuORF'] 63080 20125 LLQNKRITYEK True NCI_RA007_Epitope_Rep5 1404.8088987020399 1404.80725490379 84.355 3 -1.5469457673119078 0.4225176473280172 1.0 ['ENST00000337147.11_1_6:159187137-159187215:-|nuORF'] 15287 6693 EAFGTEVLP True NCI_RA007_Epitope_Rep2 961.4756624852898 961.47456993586 30.647 2 -1.5469538005330423 0.4225176473280172 1.0 ['ENST00000248484.8_1_13:24144913-24164301:+|nuORF', 'ENST00000403372.6_2_13:24144913-24190045:+|nuORF'] 94037 23051 RRKRRERKQR True H1975_Epitope_Rep2 1467.9083274465495 1467.9072299358602 95.121 2 -1.5469664746665681 0.4225176473280172 1.0 ['ENSG00000130764|ENST00000378251|LRRC47'] 3786 9166 AGTLRPHPL True NCI_RA007_Epitope_Rep3 960.5504991913999 960.54940993586 43.142 2 -1.547006467560343 0.4225176473280172 1.0 ['ENSG00000112238|ENST00000369215|PRDM13'] 113085 10982 TLNRQKYRHVD True NCI_RA007_Epitope_Rep5 1428.75859446468 1428.7574899358601 48.879 2 -1.547045866471575 0.4225176473280172 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 132887 18408 VVLTLPTS True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 77.617 2 -1.5470505733614792 0.4225176473280172 1.0 ['DGKB|p.M667Ifs*8|1|0.04|ENSG00000136267|chr7:14338629-14338639|ATCCTCCATGC/-|frameshift_variant', 'ENST00000403963.5_1_7:14249142-14880939:-|nuORF', 'ENSG00000136267|ENST00000402815|DGKB', 'ENST00000477401.5_1_7:14660999-14880939:-|nuORF', 'DGKB|p.P465Sfs*21|1|0.21|ENSG00000136267|chr7:14607477-14607478|-/A|frameshift_variant'] 102746 20925 SMWFKGMNVN True H1975_Epitope_Rep2 1212.5419853066398 1212.5403449037901 86.626 3 -1.5472668191562813 0.4225194201970049 1.0 ['ENST00000244769.8_1_6:16305202-16305265:-|nuORF'] 26784 13608 FKRFWWRHYQD True H1975_Epitope_Rep1 1667.8109643907098 1667.8098699358602 57.473 2 -1.5472912220054618 0.4225194201970049 1.0 ['ENST00000354179.8_2_5:176671236-176673694:+|nuORF'] 22827 16337 EVAGAVWTRR True PC9_epitope_Rep1 1143.61489035311 1143.61378993586 67.659 2 -1.547552230238626 0.4226061091408306 1.0 ['ENST00000581616.2_1_17:16855864-16875385:-|nuORF'] 40556 15787 HRFWYNYRQRK True H1975_Epitope_Rep3 1652.84366150132 1652.8425699358602 66.172 2 -1.547606310643236 0.4226078799249531 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 113083 11456 TLNRQKYRHVD True NCI_RA007_Epitope_Rep1 1428.75859446468 1428.7574899358601 48.527 2 -1.547629316662852 0.4226078799249531 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 116168 18343 TSVDDFLSV True PC9_epitope_Rep5 981.46549172441 981.46438993586 75.571 2 -1.5477164243217898 0.4226210904431784 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2'] 128358 5637 VPQSIANSL True PC9_epitope_Rep2 927.50254593947 927.50144993586 27.067 2 -1.5477194512879155 0.4226210904431784 1.0 ['ENSG00000204695|ENST00000641895|OR14J1'] 103391 12684 SPPPLLERTP True PC9_epitope_Rep2 1105.61315901761 1105.61206993586 54.096 2 -1.5478771198629497 0.42263913515986956 1.0 ['PTPN12|p.P678L|1|0.36|ENSG00000127947|chr7:77632384-77632384|C/T|missense_variant'] 1494 4996 AEELLGSL True NCI_RA007_Epitope_Rep1 830.43854870058 830.43744993586 23.516 2 -1.5480553113479556 0.42265234450964917 1.0 ['ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 74660 20785 NGLTRHRR True PC9_epitope_Rep6 1008.5689432202 1008.56784993586 92.716 2 -1.548071555213294 0.42265234450964917 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 123256 16800 VGLKFMQV True NCI_RA007_Epitope_Rep4 920.51535955264 920.5148149679301 72.803 1 -1.5481288801100044 0.4226655532550132 1.0 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF'] 63501 2851 LLYCWEMFWIV True NCI_RA007_Epitope_Rep2 1501.71380165901 1501.71214490379 15.462 3 -1.5481724119122222 0.4226655532550132 1.0 ['ENST00000578529.5_1_18:259269-260310:-|nuORF', 'ENST00000581116.1_1_18:259269-264031:-|nuORF'] 79889 19385 PENKITLCKIH True NCI_RA007_Epitope_Rep4 1294.70674213262 1294.70509490379 83.833 3 -1.5483630282117584 0.42271484620751976 1.0 ['nc|ENSG00000130783|Q6P9F0-2|CCDC62', 'ENSG00000130783|ENST00000253079|CCDC62', 'nc|ENSG00000130783|Q6P9F0-3|CCDC62'] 31223 13923 GCRDGGDSS True NCI_RA007_Epitope_Rep5 852.30319450992 852.30208993586 60.239 2 -1.5484585537596438 0.42271484620751976 1.0 ['ENST00000353159.6_2_9:33461728-33461932:-|nuORF'] 18316 18230 EISESRVV True PC9_epitope_Rep3 917.4818104948899 917.48070993586 75.334 2 -1.5484780814930355 0.42271484620751976 1.0 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 81911 23042 PLSHRGVRRLI True PC9_epitope_Rep6 1302.79967143102 1302.7980149037899 101.73 3 -1.5485334408691238 0.42271484620751976 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45002340-45002744:-|nuORF'] 81021 17734 PILVMKFI True NCI_RA007_Epitope_Rep1 959.58779621691 959.58724496793 73.121 1 -1.548719233691006 0.4227544636219103 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 39274 23372 HILGMWRRPN True PC9_epitope_Rep4 1278.6767794170198 1278.67513490379 98.156 3 -1.5487715148347363 0.4227544636219103 1.0 ['SLC16A1|p.Y421Hfs*41|1|0.07|ENSG00000155380|chr1:112914132-112914133|TA/-|frameshift_variant'] 110262 18268 TERLQHFQT True NCI_RA007_Epitope_Rep5 1158.5781704912197 1158.57652490379 77.073 3 -1.548778867846302 0.4227544636219103 1.0 ['ENSG00000153823|ENST00000392055|PID1'] 107770 8173 SVSTSERTL True PC9_epitope_Rep1 978.49818883502 978.49708993586 36.27 2 -1.5487811678025478 0.4227544636219103 1.0 ['ENSG00000038358|ENST00000358933|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENST00000572221.5_1_16:67909733-67911757:+|nuORF'] 13195 21928 DLSEAHFA True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 95.263 2 -1.5487849545261405 0.4227544636219103 1.0 ['ENSG00000099769|ENST00000215539|IGFALS', 'nc|ENSG00000099769|P35858-2|IGFALS'] 39313 5282 HISDFSFLMV True PC9_epitope_Rep5 1194.5743309807401 1194.57268490379 25.333 3 -1.5488100551568291 0.4227544636219103 1.0 ['ENSG00000126583|ENST00000263431|PRKCG', 'nc|ENSG00000126583|P05129-2|PRKCG', 'PRKCG|p.K384Rfs*3|1|0.21|ENSG00000126583|chr19:53898494-53898494|A/-|frameshift_variant'] 45667 19392 IRIILSFFFL True NCI_RA007_Epitope_Rep5 1267.76926573619 1267.7681699358602 81.476 2 -1.5489479253771612 0.4227795695235481 1.0 ['TAS2R3|p.F250Cfs*5|1|0.46|ENSG00000127362|chr7:141764905-141764912|TTTCTTAA/-|frameshift_variant', 'ENSG00000127362|ENST00000247879|TAS2R3'] 102939 17412 SPDSVPERP True H1975_Epitope_Rep2 982.4719740871799 982.47086993586 72.268 2 -1.5489713779494492 0.4227795695235481 1.0 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1'] 21622 24635 ERRQQNLRA True PC9_epitope_Rep2 1169.6377510560098 1169.63664993586 100.4 2 -1.5490172222078094 0.4227795695235481 1.0 ['ENSG00000084092|ENST00000264230|NOA1'] 34362 11962 GPEYLKRL True H1975_Epitope_Rep1 974.5549158654999 974.55380993586 51.016 2 -1.5490850104218303 0.4227795695235481 1.0 ['nc|ENSG00000143033|Q9Y483-3|MTF2', 'MTF2|p.A507Lfs*7|1|0.07|ENSG00000143033|chr1:93136761-93136770|AGAGCACTCC/-|frameshift_variant', 'nc|ENSG00000143033|Q9Y483-4|MTF2', 'ENSG00000143033|ENST00000370298|MTF2', 'ENST00000468457.1_1_1:93583908-93584959:+|nuORF', 'ENST00000471953.5_1_1:93545083-93592837:+|nuORF'] 126254 9354 VLHEMMQQTFN True PC9_epitope_Rep6 1376.62169217932 1376.62003490379 46.166 3 -1.5490905392127832 0.4227795695235481 1.0 ['ENSG00000228083|ENST00000380222|IFNA14'] 116067 20991 TSPRCAGR True H1975_Epitope_Rep2 846.4130197424199 846.41192993586 86.89 2 -1.549155572925609 0.4227795695235481 1.0 ['ENST00000584516.5_1_17:73585822-73586164:+|nuORF'] 127128 10302 VLTPGPPL True NCI_RA007_Epitope_Rep1 792.47454028648 792.47344993586 44.069 2 -1.5491742033226301 0.4227795695235481 1.0 ['ENST00000264080.11_2_19:6730008-6730326:-|nuORF'] 138657 14798 YIHTHTHIL True PC9_epitope_Rep3 1133.59817765981 1133.5970899358601 62.056 2 -1.5492239882498349 0.4227795695235481 1.0 ['ENST00000261716.7_1_17:27870225-27870339:+|nuORF'] 42847 8612 IEQLWRDYNKY True H1975_Epitope_Rep3 1526.7517777487396 1526.75068993586 38.117 2 -1.5492585107439785 0.4227795695235481 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 14906 6997 DYATLFAARS True NCI_RA007_Epitope_Rep2 1113.5454733806098 1113.54436993586 31.838 2 -1.5493037015073472 0.42278133577310156 1.0 ['ENSG00000187714|ENST00000374115|SLC18A3', 'SLC18A3|p.G240Afs*9|1|0.39|ENSG00000187714|chr10:49611456-49611456|C/-|frameshift_variant'] 74617 16898 NGIALRHP True NCI_RA007_Epitope_Rep1 876.49298431528 876.49188993586 69.857 2 -1.5493253866364523 0.42278133577310156 1.0 ['CENPK|p.R248L|1|0.27|ENSG00000123219|chr5:65518542-65518542|C/A|missense_variant', 'ENSG00000123219|ENST00000396679|CENPK'] 36045 12962 GVAAAGHA True NCI_RA007_Epitope_Rep4 652.3292730351201 652.32872496793 56.954 1 -1.5495709543482932 0.4228336821399572 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 114657 18685 TQEKIWEFKGK True PC9_epitope_Rep6 1392.7401504358797 1392.73904993586 84.515 2 -1.5499529161669026 0.4229220987146059 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 115965 4454 TSIDKIAAQ True PC9_epitope_Rep4 945.51311062317 945.51200993586 23.595 2 -1.549953743674912 0.4229220987146059 1.0 ['ENSG00000184486|ENST00000328345|POU3F2', 'nc|ENSG00000184486|P20265-3|POU3F2', 'nc|ENSG00000184486|P20265-2|POU3F2', 'nc|ENSG00000196767|P49335|POU3F4', 'ENSG00000196767|ENST00000644024|POU3F4', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3'] 3626 9460 AGPGRLRL True PC9_epitope_Rep6 838.5137197598599 838.51262993586 46.628 2 -1.549957362980485 0.4229220987146059 1.0 ['ENSG00000225556|ENST00000694868|C2CD4D'] 66420 12019 LSGLPDTVFEI True PC9_epitope_Rep6 1189.6230549949698 1189.6219499358601 57.52 2 -1.5499759127704154 0.4229401337983876 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 59884 2695 LGGELGSKIP True PC9_epitope_Rep1 969.5494961318899 969.54838993586 14.789 2 -1.5501551573914027 0.42297972578929915 1.0 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH', 'ENST00000497042.1_1_1:241675257-241676920:-|nuORF'] 75479 15806 NKKAAPRA True NCI_RA007_Epitope_Rep3 854.5086343794198 854.50752993586 69.809 2 -1.5501711599674322 0.42297972578929915 1.0 ['ENST00000568570.1_1_16:31993258-32005419:+|nuORF', 'nc|ENSG00000275832|Q9P227-2|ARHGAP23', 'ENSG00000275832|ENST00000622683|ARHGAP23'] 4572 23861 AKPGGFGMG True NCI_RA007_Epitope_Rep5 820.3901590395199 820.38906993586 99.149 2 -1.5501795642949887 0.42297972578929915 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 64681 9324 LPVPGLPCLLA True NCI_RA007_Epitope_Rep2 1091.64128834175 1091.64018993586 40.877 2 -1.5503242500403092 0.42297972578929915 1.0 ['ENST00000301015.13_2_16:88800318-88802577:-|nuORF'] 62564 14203 LLKLKHFPSVI True H1975_Epitope_Rep3 1293.81727855777 1293.81562490379 59.969 3 -1.5503268039595444 0.42297972578929915 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 138252 24484 YGWQLTLLLL True NCI_RA007_Epitope_Rep2 1218.7012457460198 1218.69961490379 102.85 3 -1.5503614162424786 0.42297972578929915 1.0 ['ENSG00000085563|ENST00000622132|ABCB1', 'nc|ENSG00000085563|P08183-2|ABCB1', 'ENST00000488737.6_1_7:87133561-87160896:-|nuORF', 'nc|ENSG00000005471|P21439-3|ABCB4', 'ENSG00000005471|ENST00000649586|ABCB4', 'nc|ENSG00000005471|P21439|ABCB4'] 90102 24514 REAPGKLS True H1975_Epitope_Rep1 856.4766655448 856.47556993586 101.59 2 -1.5503884648940547 0.4229863239262681 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 121081 9174 VERCHCKF True NCI_RA007_Epitope_Rep5 1020.46334106312 1020.46224993586 41.938 2 -1.5505166880764325 0.42301579133934797 1.0 ['ENSG00000111186|ENST00000397196|WNT5B', 'ENST00000545747.1_1_12:1754224-1755415:+|nuORF', 'WNT5B|p.V329L|1|0.14|ENSG00000111186|chr12:1646157-1646157|G/T|missense_variant'] 74699 22947 NGTATVLSV True PC9_epitope_Rep5 860.46034677432 860.45924993586 93.253 2 -1.5505239459042557 0.4230452580785327 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 104601 23057 SQRQIRKSR True PC9_epitope_Rep2 1157.67413656473 1157.67302993586 94.18 2 -1.550606527378463 0.4230747241438454 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 24829 3986 FAVFRVKLTAK True PC9_epitope_Rep5 1278.7812274022197 1278.78012993586 20.411 2 -1.5506449371320339 0.4230813208927918 1.0 ['ENSG00000075568|ENST00000186436|TMEM131'] 118778 17864 VAAAPVVP True NCI_RA007_Epitope_Rep2 722.4326754745 722.43212496793 74.227 1 -1.5507015858681323 0.42310770638005946 1.0 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 122540 5155 VGETLQPK True NCI_RA007_Epitope_Rep4 870.4810822188999 870.47998993586 26.352 2 -1.5507544050604578 0.42310770638005946 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 61216 21803 LILQYYMLHET True PC9_epitope_Rep4 1422.7217234904201 1422.7206299358602 92.06 2 -1.5507984603993161 0.42310770638005946 1.0 ['ENSG00000259224|ENST00000412468|SLC35G6', 'ENSG00000177710|ENST00000382435|SLC35G5', 'ENSG00000164729|ENST00000297307|SLC35G3'] 70751 14319 LWWRNWFWVHF True H1975_Epitope_Rep3 1675.8200725224299 1675.8189699358602 60.424 2 -1.5508066214130218 0.42310770638005946 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 53927 10466 KTPRRFMDED True NCI_RA007_Epitope_Rep1 1293.6135700237699 1293.61192490379 44.693 3 -1.5508827344604994 0.42310946468180466 1.0 ['ENSG00000272333|ENST00000420124|KMT2B'] 49366 9554 KESQVDELNIW True NCI_RA007_Epitope_Rep2 1359.6670450652698 1359.66594993586 41.777 2 -1.5508990575144455 0.42310946468180466 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 121751 17012 VFLVSVPAAP True PC9_epitope_Rep4 998.5800679841798 998.57896993586 73.429 2 -1.5509835000196617 0.4231160605055852 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 115595 9417 TRTNEGPLIV True PC9_epitope_Rep2 1098.6033226098998 1098.6022299358601 41.562 2 -1.5512607239039833 0.4232141223817799 1.0 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 20829 16516 EQIRLAGRQPQ True NCI_RA007_Epitope_Rep2 1294.7105816430997 1294.7094899358601 68.972 2 -1.5513822095860044 0.42322247247533357 1.0 ['ENST00000517479.1_1_X:47077465-47077851:+|nuORF'] 89900 7551 RCKEPLRYSY True NCI_RA007_Epitope_Rep2 1313.65504091293 1313.65394993586 33.997 2 -1.5513910145259595 0.42322247247533357 1.0 ['ENSG00000002746|ENST00000395891|HECW1', 'nc|ENSG00000002746|Q76N89-2|HECW1', 'HECW1|p.H58Lfs*14|1|0.13|ENSG00000002746|chr7:43311907-43311908|-/T|frameshift_variant', 'ENST00000492310.5_1_7:43153648-43477745:+|nuORF'] 91998 3880 RKRFEIACYRN True NCI_RA007_Epitope_Rep2 1454.7564862896998 1454.7553899358602 19.728 2 -1.551472861789138 0.42322247247533357 1.0 ['ENST00000437201.5_1_7:72300234-72301326:+|nuORF', 'ENST00000456312.5_1_7:72300234-72300363:+|nuORF', 'ENST00000423945.5_1_7:72300234-72302185:+|nuORF'] 8861 14566 AVFLRRGH True PC9_epitope_Rep6 954.55116789774 954.55006993586 67.926 2 -1.5515138967623567 0.4232356606340532 1.0 ['ENST00000456989.6_1_17:38347644-38348502:+|nuORF'] 67828 17006 LTAGHGLQVEL True PC9_epitope_Rep1 1136.61897267404 1136.6178699358602 70.236 2 -1.551531903476347 0.4232356606340532 1.0 ['AQP4|p.L161Q|1|0.09|ENSG00000171885|chr18:26861261-26861261|A/T|missense_variant'] 118886 11204 VADATAIKQHV True NCI_RA007_Epitope_Rep1 1151.62987171091 1151.6287699358602 47.58 2 -1.5515608011078132 0.4232422544872528 1.0 ['ENSG00000172421|ENST00000305286|EFCAB3', 'nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 76633 12672 NQRVIRDWR True PC9_epitope_Rep5 1241.6741365647297 1241.67302993586 53.747 2 -1.55158226712454 0.42324400951161517 1.0 ['ENST00000535572.5_1_12:992660-992994:+|nuORF'] 132737 12521 VVIFFGPC True NCI_RA007_Epitope_Rep4 880.4516966669198 880.45058993586 55.18 2 -1.5515926485628904 0.42324400951161517 1.0 ['ENSG00000174982|ENST00000641692|OR4S2'] 26479 11598 FIEERRARENR True PC9_epitope_Rep4 1474.7753071579798 1474.7742099358602 52.371 2 -1.5517443893492937 0.423245764455724 1.0 ['ENST00000415992.5_1_9:139693810-139699267:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-3|CCDC183', 'ENST00000479371.5_1_9:139697227-139701184:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-4|CCDC183', 'ENST00000430612.5_1_9:139694306-139700853:+|nuORF', 'ENST00000371682.7_1_9:139690828-139700853:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-2|CCDC183', 'ENSG00000213213|ENST00000338005|CCDC183'] 86106 23967 QHVHVGGR True NCI_RA007_Epitope_Rep1 888.4678321965999 888.46672993586 99.196 2 -1.5517648295785897 0.423245764455724 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 125623 24826 VKKPLAAA True H1975_Epitope_Rep2 796.5170738047999 796.5165249679301 102.06 1 -1.5518680410003685 0.42326729843733923 1.0 ['MYL1|p.V11L|1|0.27|ENSG00000168530|chr2:210315012-210315012|C/A|missense_variant'] 43510 7775 IGLYEPELG True NCI_RA007_Epitope_Rep1 989.5069626135698 989.50586993586 34.233 2 -1.5519402377676081 0.42326729843733923 1.0 ['nc|ENSG00000186998|Q96A84-2|EMID1', 'nc|ENSG00000186998|Q96A84|EMID1', 'ENSG00000186998|ENST00000334018|EMID1'] 141648 7799 YTSNDDVLED True NCI_RA007_Epitope_Rep1 1169.47242757965 1169.47132993586 34.326 2 -1.5519445723263585 0.42326729843733923 1.0 ['ENSG00000172071|ENST00000303236|EIF2AK3'] 132668 11861 VVGGGWGA True NCI_RA007_Epitope_Rep2 701.34967412653 701.34912496793 50.739 1 -1.551960272031913 0.42326729843733923 1.0 ['ENST00000576995.1_1_17:79079719-79080836:+|nuORF'] 125625 25061 VKKPLAAA True NCI_RA007_Epitope_Rep1 796.5170738047999 796.5165249679301 103.72 1 -1.551960335039109 0.42326729843733923 1.0 ['MYL1|p.V11L|1|0.27|ENSG00000168530|chr2:210315012-210315012|C/A|missense_variant'] 46348 10607 ISRDAFLK True PC9_epitope_Rep5 948.53926580136 948.53816993586 45.788 2 -1.5520363817723957 0.42328048376218835 1.0 ['nc|ENSG00000117174|Q9NWK9-2|ZNHIT6', 'ENSG00000117174|ENST00000370574|ZNHIT6'] 74070 10455 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 45.23 1 -1.5520371253922955 0.42328048376218835 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 135970 21931 WQIRQVRALL True PC9_epitope_Rep4 1281.7669743204099 1281.76531490379 92.567 3 -1.5520890159841056 0.4232839915414071 1.0 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 127197 18386 VLVPRPSQVP True PC9_epitope_Rep1 1090.6498788795 1090.6487899358601 75.512 2 -1.5520962951235662 0.4232839915414071 1.0 ['ENST00000526387.5_1_11:67177262-67177541:+|nuORF'] 127804 16966 VPEEFAFA True NCI_RA007_Epitope_Rep2 908.4279840168798 908.42688993586 70.731 2 -1.5521470949423954 0.4232839915414071 1.0 ['ENSG00000177096|ENST00000321753|PHETA2'] 84829 7603 QEAHWVLCEVL True NCI_RA007_Epitope_Rep1 1325.6438075228898 1325.64270993586 33.566 2 -1.5521618446832135 0.4232839915414071 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 28417 7719 FSAFTPTDLRF True NCI_RA007_Epitope_Rep5 1300.6451874218799 1300.6440899358602 36.391 2 -1.5521847677110048 0.4232874989998743 1.0 ['ENST00000176763.9_1_5:171470328-171470631:-|nuORF'] 11795 16075 DHERERFYIYR True H1975_Epitope_Rep1 1582.7640737679399 1582.7629699358602 67.172 2 -1.552230606191877 0.4232874989998743 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 69475 19861 LVALCCFLLRG True PC9_epitope_Rep3 1206.6617065164999 1206.66060993586 81.632 2 -1.5522701195043733 0.4232874989998743 1.0 ['ENSG00000112619|ENST00000230381|PRPH2'] 102303 6696 SLSPGGPGP True PC9_epitope_Rep1 767.38136817763 767.38026993586 30.559 2 -1.5522722843958763 0.4232874989998743 1.0 ['ENST00000588404.5_1_19:38907704-38910742:-|nuORF'] 117252 8087 TVLTPSAPPS True NCI_RA007_Epitope_Rep1 968.51786165044 968.51676993586 35.454 2 -1.5523731434127008 0.42330552063092924 1.0 ['ENST00000361866.7_1_21:47424611-47424767:+|nuORF'] 109866 12652 TEEQVQKF True H1975_Epitope_Rep2 1007.4923751785898 1007.49126993586 53.763 2 -1.5524771059928761 0.42331211210295916 1.0 ['ENST00000533125.1_8:145505676-145515010:-|nuORF'] 92496 13629 RLWRHWWLRGW True H1975_Epitope_Rep1 1650.8796530872198 1650.87854993586 57.556 2 -1.552531043442591 0.4233204562598578 1.0 ['ENST00000473038.5_1_1:46033610-46035625:+|nuORF'] 61661 26047 LKRPQLRKLGI True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 108.12 3 -1.5525755216755146 0.4233204562598578 1.0 ['ENST00000533705.5_1_9:86283447-86283558:-|nuORF'] 81389 7456 PLDQYSPSFP True PC9_epitope_Rep5 1149.5342399905699 1149.5331499358601 33.632 2 -1.5525914801587402 0.4233204562598578 1.0 ['nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF'] 82247 14414 PPEPREKTI True PC9_epitope_Rep4 1065.58185888933 1065.5807699358602 63.352 2 -1.552628108430454 0.4233222090152693 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 91602 15627 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 65.263 3 -1.5526937540592416 0.4233222090152693 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 74057 17053 NDLLNSLLKH True NCI_RA007_Epitope_Rep1 1165.64552177505 1165.6444299358602 70.462 2 -1.552833764588578 0.42332746680075883 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 78723 5079 PAAANVRK True PC9_epitope_Rep2 825.48208527841 825.48098993586 24.912 2 -1.5528445312209158 0.42332746680075883 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 82234 22269 PPCFPLCL True PC9_epitope_Rep3 888.42376766692 888.42266993586 90.943 2 -1.5529372410960243 0.42332746680075883 1.0 ['ENST00000491241.1_1_1:33476368-33477090:-|nuORF'] 10541 22114 CLQKLLYF True PC9_epitope_Rep2 1026.5572243646197 1026.55612993586 90.538 2 -1.552964264621596 0.42332746680075883 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 71280 5619 LYPWECFVF True PC9_epitope_Rep1 1202.5470536037399 1202.54539490379 26.439 3 -1.5529903649344758 0.42332746680075883 1.0 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'nc|ENSG00000240849|A5PLL7-2|PEDS1', 'ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 20394 14008 EPALWPAERP True PC9_epitope_Rep6 1164.5927579261997 1164.5916699358602 65.737 2 -1.5530083926195752 0.42332746680075883 1.0 ['ENST00000560079.6_1_15:85327669-85327744:+|nuORF'] 29107 7876 FTKTSQKFGQW True PC9_epitope_Rep3 1356.6826355597598 1356.68152993586 35.278 2 -1.553024577224354 0.4233340571180417 1.0 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3', 'nc|ENSG00000152413|Q86YM7-3|HOMER1', 'nc|ENSG00000051128|Q9NSC5-5|HOMER3', 'ENSG00000103942|ENST00000450735|HOMER2', 'nc|ENSG00000103942|Q9NSB8|HOMER2', 'ENSG00000152413|ENST00000334082|HOMER1', 'nc|ENSG00000152413|Q86YM7-2|HOMER1'] 120735 10202 VEKPAPKGK True NCI_RA007_Epitope_Rep5 952.5705659296399 952.56946993586 45.875 2 -1.5530814654029717 0.4233393136705939 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.P1213Qfs*54|1|0.19|ENSG00000155966|chrX:148987378-148987378|C/-|frameshift_variant'] 82959 3537 PSEPLNAWVPP True H1975_Epitope_Rep3 1205.60807363717 1205.60641490379 18.562 3 -1.5531749267782569 0.4233393136705939 1.0 ['ENST00000476975.5_1_2:97498263-97499261:-|nuORF'] 57567 8976 LEDSLQAQ True PC9_epitope_Rep1 902.4345259493 902.43342993586 39.372 2 -1.5532012571761538 0.4233393136705939 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 32467 24653 GGASKWPV True NCI_RA007_Epitope_Rep1 800.4180880395198 800.41698993586 102.09 2 -1.553214352236152 0.4233393136705939 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 136931 23793 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 98.876 2 -1.5532176817591017 0.4233393136705939 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 133365 15490 VVVGKLLVL True PC9_epitope_Rep6 938.6528390016199 938.65174993586 71.759 2 -1.5532732284402302 0.4233393136705939 1.0 ['ENST00000495440.1_1_3:196439919-196444680:+|nuORF'] 70260 18777 LVRKARSHIG True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 79.06 2 -1.553281017061547 0.4233428176385223 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 122646 10616 VGGAGPPP True NCI_RA007_Epitope_Rep5 650.33877508966 650.33822496793 47.472 1 -1.553362977278771 0.4233428176385223 1.0 ['ENSG00000099203|ENST00000214869|TMED1'] 127256 20288 VLYMLTEM True PC9_epitope_Rep3 998.48167646586 998.48056993586 83.289 2 -1.5533631497313674 0.4233428176385223 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.Q827Lfs*8|1|0.09|ENSG00000189079|chr12:45850603-45850619|AACCTGTGCAAACTTCA/-|frameshift_variant', 'ENST00000480128.1_1_12:46231109-46233281:+|nuORF', 'ENST00000479608.5_1_12:46230576-46239804:+|nuORF'] 36093 20868 GVAFIKFQYK True PC9_epitope_Rep4 1199.6702799709099 1199.66918993586 88.424 2 -1.5533895657472079 0.4233428176385223 1.0 ['FAM171A1|p.S820*|1|0.11|ENSG00000148468|chr10:15213129-15213129|G/-|frameshift_variant', 'ENSG00000148468|ENST00000378116|FAM171A1'] 109522 8380 TDQFTITMW True H1975_Epitope_Rep3 1141.5113963710098 1141.51028993586 37.217 2 -1.5534856432686353 0.4233722604383299 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant'] 27677 23669 FPGYPIHV True NCI_RA007_Epitope_Rep5 928.4806882960798 928.47958993586 98.373 2 -1.5535635878215983 0.4234082910553499 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L'] 112642 6769 TLFFVVWDHKF True PC9_epitope_Rep3 1437.7445075403296 1437.74287490379 31.058 3 -1.5536066725377682 0.4234082910553499 1.0 ['ENST00000463205.2_1_2:202503640-202507349:-|nuORF'] 120765 9155 VEKYLLEKSR True H1975_Epitope_Rep1 1263.7186867153098 1263.7175899358601 40.121 2 -1.553657562877251 0.42342980541812825 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'MYO9B|p.Y591*|1|0.21|ENSG00000099331|chr19:17168043-17168059|ACCTGCTGGACGAGGAG/-|frameshift_variant', 'MYO9A|p.M498Cfs*5|1|0.06|ENSG00000066933|chr15:71994540-71994564|GGGCACTATACAGAGACTTAGCCAT/-|frameshift_variant', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF', 'MYO9A|p.E1131Kfs*31|1|0.23|ENSG00000066933|chr15:71899766-71899766|C/-|frameshift_variant', 'MYO9A|p.V1543Dfs*13|1|0.1|ENSG00000066933|chr15:71897875-71897876|-/AT|frameshift_variant', 'nc|ENSG00000066933|B2RTY4-3|MYO9A', 'MYO9A|p.Q871Hfs*50|1|0.1|ENSG00000066933|chr15:71916442-71916443|-/GCAG|frameshift_variant'] 68087 7689 LTDMPDILL True PC9_epitope_Rep6 1029.5416338701298 1029.5405299358601 38.903 2 -1.5537474801811282 0.42342980541812825 1.0 ['BCHE|p.L337I|1|0.21|ENSG00000114200|chr3:165830025-165830025|G/T|missense_variant', 'BCHE|p.W440Mfs*4|1|0.29|ENSG00000114200|chr3:165829716-165829717|-/T|frameshift_variant', 'ENSG00000114200|ENST00000264381|BCHE'] 59335 21756 LFKALKRIHQF True PC9_epitope_Rep6 1399.84522464111 1399.84412993586 96.577 2 -1.5537649633442168 0.42342980541812825 1.0 ['CDC7|p.G288Wfs*14|1|0.16|ENSG00000097046|chr1:91513981-91513982|-/T|frameshift_variant', 'CDC7|p.G288Efs*18|1|0.25|ENSG00000097046|chr1:91513987-91513987|G/-|frameshift_variant', 'ENSG00000097046|ENST00000234626|CDC7'] 15457 16619 EALKRRWRWQQ True NCI_RA007_Epitope_Rep1 1555.84841252859 1555.84730993586 68.762 2 -1.5537942240694902 0.42342980541812825 1.0 ['ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'nc|ENSG00000264522|Q6GQQ9-2|OTUD7B', 'OTUD7B|p.G704Afs*124|1|0.15|ENSG00000264522|chr1:149944278-149944278|C/-|frameshift_variant', 'ENSG00000264522|ENST00000581312|OTUD7B'] 109247 8740 TASIELRVTSL True NCI_RA007_Epitope_Rep2 1188.6714021697198 1188.6703099358601 38.643 2 -1.5538157265125268 0.42342980541812825 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 27951 13503 FQEMKNNP True PC9_epitope_Rep2 1006.4542158480599 1006.45310993586 57.227 2 -1.553903690256339 0.42343155513407904 1.0 ['ENSG00000109193|ENST00000226444|SULT1E1'] 59593 17404 LFVNQHLS True PC9_epitope_Rep6 956.50796567308 956.50686993586 79.559 2 -1.553907468397323 0.42343155513407904 1.0 ['PDCL2|p.L127F|1|0.24|ENSG00000163440|chr4:55562594-55562594|C/G|missense_variant'] 3323 6301 AGGIGDAKE True PC9_epitope_Rep3 816.39774651776 816.39664993586 29.268 2 -1.5539693921643056 0.42343814268086466 1.0 ['nc|ENSG00000100206|Q14565-2|DMC1', 'ENSG00000100206|ENST00000216024|DMC1'] 91739 24358 RKEPRKIIAT True PC9_epitope_Rep4 1210.7509899030997 1210.7498899358602 102.18 2 -1.5541541749224839 0.4234825029418821 1.0 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 8386 5732 ATLPQESP True PC9_epitope_Rep4 841.41814760917 841.41704993586 28.873 2 -1.5542816931070895 0.4234825029418821 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 138284 6946 YHCNQCGKAF True NCI_RA007_Epitope_Rep3 1169.4746340228096 1169.47407496793 34.428 1 -1.5543422728862737 0.4234825029418821 1.0 ['nc|ENSG00000291239|Q3ZCX4-2|ZNF568', 'ENSG00000198453|ENST00000333987|ZNF568'] 130197 10771 VSEPGDPKVT True NCI_RA007_Epitope_Rep4 1027.51858992643 1027.51748993586 48.279 2 -1.5543823522797457 0.4234825029418821 1.0 ['ENSG00000031081|ENST00000264245|ARHGAP31'] 3235 15160 AGESQIFPAVL True PC9_epitope_Rep5 1130.5971746003 1130.5960699358602 63.32 2 -1.5544248140820098 0.4234825029418821 1.0 ['ENST00000449075.1_1_2:118940771-118943830:-|nuORF'] 107028 17325 SVFPSFGRL True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 79.254 2 -1.5544376733784735 0.423489089455044 1.0 ['ENST00000503498.1_1_3:129133914-129140362:-|nuORF'] 131470 23690 VTKARLTDK True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 95.917 2 -1.5546545516519465 0.42357564748489107 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 28278 24434 FRNLRKQRIEI True PC9_epitope_Rep2 1471.8735646472699 1471.87192490379 99.56 3 -1.554779579426334 0.42358088579686304 1.0 ['nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2', 'ENST00000471736.5_1_4:158142110-158255356:+|nuORF'] 11582 11806 DGASRSSH True H1975_Epitope_Rep2 815.35219330767 815.35164496793 50.488 1 -1.554862022019718 0.42358088579686304 1.0 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1', 'nc|ENSG00000177910|B4DYI2|SPATA31C2'] 55906 7492 LAQPSGPC True NCI_RA007_Epitope_Rep1 771.35852455807 771.3579749679301 33.134 1 -1.554872430611289 0.42358088579686304 1.0 ['CDHR1|p.A801Rfs*40|1|0.28|ENSG00000148600|chr10:84214441-84214441|G/-|frameshift_variant'] 41908 13600 IDAQDRVLLLH True PC9_epitope_Rep5 1291.72483472491 1291.72372993586 57.337 2 -1.554925505095982 0.42358088579686304 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 63588 18286 LMHFILRKYK True PC9_epitope_Rep4 1347.7849328836699 1347.78382993586 78.407 2 -1.5549256905542495 0.42358088579686304 1.0 ['MAGEB1|p.G212Afs*13|1|0.77|ENSG00000214107|chrX:30251126-30251126|G/-|frameshift_variant', 'MAGEB1|p.P301Hfs*8|1|0.16|ENSG00000214107|chrX:30251393-30251393|C/-|frameshift_variant', 'ENSG00000214107|ENST00000397548|MAGEB1'] 124068 17814 VGSLEVLI True PC9_epitope_Rep6 828.49566965388 828.49456993586 81.153 2 -1.5549616416307548 0.42358088579686304 1.0 ['ENSG00000134061|ENST00000256447|CD180'] 7632 7131 ASGTKLLEA True PC9_epitope_Rep5 888.4916469025999 888.49054993586 32.399 2 -1.5550548684343513 0.42358747058420343 1.0 ['ENST00000450915.1_1_7:88268512-88269193:+|nuORF', 'ENST00000447052.1_1_21:24762586-24762793:+|nuORF'] 97219 5457 SDYSFSVIAMS True PC9_epitope_Rep1 1205.52744035797 1205.52634993586 25.824 2 -1.5552941875636537 0.4235958008247564 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 87107 8942 QNRWKRQNFHE True H1975_Epitope_Rep3 1541.7599914470095 1541.75888993586 39.392 2 -1.5553260284493144 0.4235958008247564 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 75974 15861 NLVCKLPRF True NCI_RA007_Epitope_Rep3 1088.6164705762399 1088.6153699358601 70.038 2 -1.5553303372448268 0.4235958008247564 1.0 ['ENST00000530903.1_1_11:126073315-126075741:-|nuORF', 'nc|ENSG00000165526|Q96CM3-2|RPUSD4', 'ENSG00000165526|ENST00000298317|RPUSD4'] 57795 5969 LEERRWER True PC9_epitope_Rep5 1172.6050539453997 1172.60341490379 27.955 3 -1.5554620548613447 0.4236546611379551 1.0 ['ENSG00000268350|ENST00000622447|FAM156A', 'ENSG00000179304|ENST00000416841|FAM156B'] 96371 22677 RYVFNQWWA True PC9_epitope_Rep4 1268.60907669668 1268.6079699358602 95.459 2 -1.555637988761962 0.4236546611379551 1.0 ['ENST00000473034.5_1_2:219533245-219536693:-|nuORF'] 126235 8893 VLGPVPRPP True H1975_Epitope_Rep2 930.5650866263799 930.56398993586 39.178 2 -1.5557920119984465 0.4236955131134058 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 66416 12691 LSGLPDTVFEI True PC9_epitope_Rep4 1189.6230549949698 1189.6219499358601 56.669 2 -1.5558512549001065 0.42369725629954536 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 135469 22265 WIFQASKHH True NCI_RA007_Epitope_Rep5 1152.58286194884 1152.5817699358602 92.79 2 -1.55588365373706 0.42369725629954536 1.0 ['ENSG00000183378|ENST00000533663|OVCH2', 'nc|ENSG00000183378|Q7RTZ1|OVCH2'] 4939 7521 ALGECCEK True PC9_epitope_Rep2 851.35172492547 851.35062993586 34.297 2 -1.5559224430949716 0.42370074243289546 1.0 ['ENST00000520448.5_1_8:24181385-24209525:+|nuORF', 'nc|ENSG00000042980|Q9UKQ2-2|ADAM28', 'ENSG00000042980|ENST00000265769|ADAM28'] 61082 26312 LIHGTADD True PC9_epitope_Rep3 840.39774651776 840.39664993586 107.42 2 -1.5559292235567581 0.42370074243289546 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 32584 12164 GGHGFPGP True H1975_Epitope_Rep2 724.3292730351199 724.32872496793 51.874 1 -1.5559700945217 0.42370074243289546 1.0 ['nc|ENSG00000126456|Q14653-4|IRF3'] 36048 19737 GVAAAGHA True PC9_epitope_Rep1 652.3292730351201 652.32872496793 80.747 1 -1.5560315785169725 0.42370074243289546 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 80732 17739 PHEGSFGF True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 75.013 2 -1.556264145219282 0.423730168701671 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 18320 5180 EISGIRKTP True NCI_RA007_Epitope_Rep2 999.57129420563 999.57018993586 24.77 2 -1.5563665519228285 0.42374333260996194 1.0 ['ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 52740 1917 KMMIDMLYFV True PC9_epitope_Rep3 1289.6222097732898 1289.62057490379 10.54 3 -1.5563666551909063 0.42374333260996194 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 52343 20333 KKKKKTKAP True PC9_epitope_Rep6 1055.7178988696699 1055.71680993586 90.915 2 -1.556641712464904 0.4237762397496517 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 89622 9276 QYRNFIFYFII True NCI_RA007_Epitope_Rep1 1522.7972713891797 1522.79616993586 40.079 2 -1.5566495771228173 0.4237762397496517 1.0 ['ENST00000452284.1_1_22:21356738-21362956:+|nuORF', 'ENST00000436079.1_1_22:21356738-21363657:+|nuORF', 'ENST00000429962.1_1_22:21356738-21357321:+|nuORF'] 128429 16140 VPRRISGA True NCI_RA007_Epitope_Rep3 854.5086343794198 854.50752993586 71.185 2 -1.5566662983924944 0.4237762397496517 1.0 ['nc|ENSG00000124813|Q13950-3|RUNX2'] 122384 2708 VGDMWILF True PC9_epitope_Rep3 979.48372507119 979.48262993586 14.877 2 -1.5566736516907882 0.4237762397496517 1.0 ['ENSG00000204642|ENST00000259951|HLA-F'] 9391 15943 AVSTDYKKL True PC9_epitope_Rep6 1023.56006081559 1023.5589699358601 73.621 2 -1.556755867239509 0.4237762397496517 1.0 ['ENSG00000185633|ENST00000554503|NDUFA4L2', 'ENST00000555173.1_1_12:57629348-57630441:-|nuORF'] 125528 21920 VKFLFLGVV True PC9_epitope_Rep4 1020.6371889374798 1020.63608993586 92.524 2 -1.5567993638526614 0.42378842552414014 1.0 ['ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 63318 2931 LLSVLVQIPKQ True H1975_Epitope_Rep1 1236.78055869588 1236.7789049037901 14.908 3 -1.556898460705611 0.42378842552414014 1.0 ['MSH4|p.S633Lfs*12|1|0.49|ENSG00000057468|chr1:75881362-75881362|C/-|frameshift_variant', 'ENSG00000057468|ENST00000263187|MSH4'] 86081 5618 QHSRNDKTKGQ True H1975_Epitope_Rep3 1297.6487096625299 1297.64707490379 26.646 3 -1.556929850772956 0.42378842552414014 1.0 ['PRDM9|p.P444Q|1|0.48|ENSG00000164256|chr5:23526419-23526419|C/A|missense_variant'] 85670 10802 QGRRPRAQAPS True PC9_epitope_Rep4 1222.6643001570199 1222.66320993586 49.309 2 -1.5569880735921033 0.42378842552414014 1.0 ['ENSG00000166987|ENST00000355673|MBD6'] 18587 10597 EKQQRGRRWRK True H1975_Epitope_Rep1 1526.8654595750597 1526.8643699358602 45.715 2 -1.5571689874392511 0.42378842552414014 1.0 ['ENST00000577284.1_1_18:9856263-9859319:+|nuORF'] 44192 14742 IIYLQCCFRRM True H1975_Epitope_Rep2 1444.7141530955198 1444.71304993586 61.865 2 -1.5571963185182278 0.42378842552414014 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 84577 23344 QCEECQCWQH True H1975_Epitope_Rep2 1292.4372625379199 1292.43616993586 96.259 2 -1.5572058592707618 0.42378842552414014 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 43882 10599 IHVCLHLA True PC9_epitope_Rep1 904.4952928143999 904.49418993586 45.663 2 -1.5572225684013294 0.42378842552414014 1.0 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000478477.1_1_7:150775105-150776989:-|nuORF', 'ENST00000467237.5_1_7:150776545-150777049:-|nuORF', 'ENST00000482806.5_1_7:150774217-150777853:-|nuORF'] 117408 10188 TVPQRMWSHFW True H1975_Epitope_Rep1 1473.69757443125 1473.69646993586 44.128 2 -1.55722700996863 0.42378842552414014 1.0 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 136002 22523 WQTKSHALKVI True PC9_epitope_Rep3 1309.75065554993 1309.7495499358602 91.91 2 -1.557271537132954 0.42378842552414014 1.0 ['ENSG00000163394|ENST00000295589|CCKAR'] 88205 2058 QRYQERSNLP True NCI_RA007_Epitope_Rep4 1289.6476470333698 1289.64601490379 11.559 3 -1.5572861385412045 0.42378842552414014 1.0 ['ENST00000366923.7_1_1:220152842-220152914:-|nuORF'] 61005 4186 LIENEEPV True NCI_RA007_Epitope_Rep4 941.4705771048499 941.46948993586 22.406 2 -1.557340961344269 0.42378842552414014 1.0 ['ENSG00000166135|ENST00000299163|HIF1AN'] 113081 10767 TLNRQKYRHVD True H1975_Epitope_Rep3 1428.75859446468 1428.7574899358601 46.496 2 -1.5573800966455924 0.42378842552414014 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 58101 17312 LEKEFHYNRY True H1975_Epitope_Rep2 1397.67279915205 1397.67170993586 71.883 2 -1.557408757286224 0.42378842552414014 1.0 ['HOXB6|p.L183Cfs*3|1|0.13|ENSG00000108511|chr17:48596541-48596541|G/-|frameshift_variant', 'ENSG00000108511|ENST00000225648|HOXB6', 'HOXA5|p.F216Y|1|0.27|ENSG00000106004|chr7:27142001-27142001|A/T|missense_variant', 'ENST00000567101.2_1_17:46685206-46710927:-|nuORF', 'ENSG00000260027|ENST00000239165|HOXB7', 'ENSG00000198353|ENST00000430889|HOXC4', 'ENSG00000182742|ENST00000332503|HOXB4'] 116504 8039 TTRNFPEREVP True H1975_Epitope_Rep3 1344.6786128084798 1344.6775099358601 35.896 2 -1.5574978929216048 0.42381784339922124 1.0 ['ENSG00000181894|ENST00000598312|ZNF329'] 2604 8592 AERMVSMAWL True H1975_Epitope_Rep2 1192.5732854349199 1192.57218993586 38.003 2 -1.557578219112131 0.4238195832143877 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 120966 6819 VEPHSPSPSSK True PC9_epitope_Rep1 1150.56185172074 1150.56074993586 31.035 2 -1.557650034018632 0.4238195832143877 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 127599 9443 VNVPGSFV True H1975_Epitope_Rep1 817.43340375049 817.4328549679301 41.237 1 -1.5577481607803798 0.4238213229500896 1.0 ['nc|ENSG00000132561|O00339-3|MATN2', 'nc|ENSG00000132561|O00339-2|MATN2', 'ENSG00000132561|ENST00000254898|MATN2', 'nc|ENSG00000132561|O00339-4|MATN2'] 15512 7611 EANDVWKAAE True NCI_RA007_Epitope_Rep3 1131.51965255559 1131.5185499358602 37.068 2 -1.5577526019813845 0.4238213229500896 1.0 ['nc|ENSG00000172262|P52739-2|ZNF131', 'ENSG00000172262|ENST00000682664|ZNF131'] 38137 24544 HDALYVVG True H1975_Epitope_Rep3 872.43921740692 872.43812993586 102.14 2 -1.5577917573790476 0.42382306260633257 1.0 ['ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'ENST00000478105.5_1_21:47981571-47987532:+|nuORF'] 16416 4780 EEKKAMLQEI True H1975_Epitope_Rep3 1217.6325741328499 1217.63092490379 23.512 3 -1.5578027170553923 0.42382306260633257 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130', 'nc|ENSG00000136715|Q9H0E3-2|SAP130'] 35472 21502 GSKGVKFM True NCI_RA007_Epitope_Rep5 852.45275929608 852.45166993586 89.779 2 -1.5580014700647844 0.4238296414706554 1.0 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'ENST00000502311.1_1_4:493115-495466:+|nuORF', 'nc|ENSG00000174227|Q5H8A4-3|PIGG'] 82065 26755 PMENNHCP True H1975_Epitope_Rep3 940.3531219078 940.35202993586 111.79 2 -1.5580987541582154 0.4238704741896073 1.0 ['ENSG00000139083|ENST00000396373|ETV6'] 119227 11460 VAKVNDSWKE True NCI_RA007_Epitope_Rep2 1174.59823722946 1174.5971499358602 49.17 2 -1.558238334224912 0.42388847023360965 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 93043 18099 RPLPRTARTL True NCI_RA007_Epitope_Rep3 1179.72002412799 1179.7189299358602 79.312 2 -1.5583197712209336 0.42389504812577783 1.0 ['ENST00000495916.1_1_7:97361495-97362128:+|nuORF'] 121899 27034 VFRAYVLLLR True PC9_epitope_Rep5 1248.7706627185198 1248.76956993586 110.6 2 -1.5583434367739601 0.4239016258677384 1.0 ['TIMELESS|p.V704F|1|0.15|ENSG00000111602|chr12:56423456-56423456|C/A|missense_variant'] 73974 4320 NCTFFFFF True PC9_epitope_Rep1 1071.4524249429098 1071.45132993586 21.502 2 -1.5583895932859744 0.4239082034594965 1.0 ['ENST00000478856.5_1_3:100067842-100068019:+|nuORF'] 69720 7979 LVENSVETR True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 35.669 2 -1.5585460348044349 0.4239642910145325 1.0 ['ENSG00000119681|ENST00000261978|LTBP2'] 121972 28307 VFTQYNKPFF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 119.74 3 -1.5585711599630327 0.4239642910145325 1.0 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF'] 30201 21372 FYRKEWPLL True PC9_epitope_Rep6 1250.6811790077797 1250.68008993586 95.082 2 -1.5585971465078081 0.4239642910145325 1.0 ['ENSG00000138375|ENST00000357276|SMARCAL1'] 64468 18670 LPPWLFSRRRR True H1975_Epitope_Rep1 1482.86841969718 1482.8673299358602 77.862 2 -1.5586120118024487 0.4239642910145325 1.0 ['nc|ENSG00000117281|O95971-4|CD160', 'nc|ENSG00000117281|O95971-3|CD160'] 93567 18084 RQLQLKLQEEL True NCI_RA007_Epitope_Rep5 1396.8038133215998 1396.80270993586 76.359 2 -1.5586332555020281 0.4239642910145325 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 75062 19447 NHTRVNCYKC True PC9_epitope_Rep3 1236.5491959453998 1236.54754490379 80.029 3 -1.5587140958146093 0.4239642910145325 1.0 ['ENST00000600766.1_3_19:23032061-23041232:+|nuORF', 'ENSG00000268696|ENST00000600766|ZNF723'] 27555 1722 FNEAAAIIRHL True PC9_epitope_Rep1 1253.6880552933699 1253.6863949037902 9.4842 3 -1.5587787627487433 0.4239642910145325 1.0 ['nc|nan|Q9NSK7-2|C19orf12', 'ENSG00000131943|ENST00000323670|C19orf12', 'nc|nan|Q9NSK7-1|C19orf12'] 1750 8179 AEGRHWHMKHF True H1975_Epitope_Rep1 1434.6727566657403 1434.6716499358602 36.401 2 -1.5588705147306017 0.4239642910145325 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1', 'ENSG00000163637|ENST00000638394|PRICKLE2'] 10860 9442 CVLMAWALYL True NCI_RA007_Epitope_Rep4 1181.59770927761 1181.59606490379 43.177 3 -1.5589733111736206 0.4239642910145325 1.0 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA', 'nc|ENSG00000132185|Q7L513-10|FCRLA', 'nc|ENSG00000132185|Q7L513-9|FCRLA', 'nc|ENSG00000132185|Q7L513-2|FCRLA', 'ENSG00000132185|ENST00000236938|FCRLA', 'nc|ENSG00000132185|Q7L513-12|FCRLA', 'nc|ENSG00000132185|Q7L513-5|FCRLA', 'nc|ENSG00000132185|Q7L513-14|FCRLA', 'nc|ENSG00000132185|Q7L513-3|FCRLA', 'nc|ENSG00000132185|Q7L513-8|FCRLA', 'FCRLA|p.W37Lfs*18|1|0.09|ENSG00000132185|chr1:161707321-161707322|-/T|frameshift_variant', 'FCRLA|p.E72Rfs*4|1|0.19|ENSG00000132185|chr1:161710824-161710824|G/-|frameshift_variant', 'nc|ENSG00000132185|Q7L513-13|FCRLA', 'nc|ENSG00000132185|Q7L513-6|FCRLA', 'nc|ENSG00000132185|Q7L513-15|FCRLA', 'nc|ENSG00000132185|Q7L513-7|FCRLA'] 122691 19649 VGGGGGHA True PC9_epitope_Rep6 610.2823228427 610.28177496793 88.238 1 -1.5589983715851834 0.4239642910145325 1.0 ['TBC1D24|p.Q514H|1|0.3|ENSG00000162065|chr16:2500820-2500820|G/C|missense_variant'] 103663 6900 SPVEFTGHK True NCI_RA007_Epitope_Rep2 1000.4977949122 1000.49668993586 31.458 2 -1.5590562499620286 0.4239642910145325 1.0 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 69446 19611 LTYQYLPYMSY True H1975_Epitope_Rep3 1440.6635399079598 1440.6624499358602 82.161 2 -1.5591851386565199 0.4239642910145325 1.0 ['WDR81|p.I1319M|1|0.27|ENSG00000167716|chr17:1730936-1730936|C/G|missense_variant'] 75446 12916 NIYYEADH True PC9_epitope_Rep1 1023.42977492203 1023.4286699358601 54.554 2 -1.5592748381891348 0.42397260273972603 1.0 ['ITGA9-SEC13|1|fusion', 'ENSG00000144668|ENST00000264741|ITGA9'] 82088 15837 PMMPNEARL True PC9_epitope_Rep4 1057.50487152193 1057.5037699358602 68.84 2 -1.559287977972021 0.42397260273972603 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 19000 8909 ELERLHPI True PC9_epitope_Rep4 1005.5607295219299 1005.55962993586 41.805 2 -1.5593262785808357 0.42397260273972603 1.0 ['ENST00000610158.1_1_10:25242209-25242413:+|nuORF'] 37354 4604 GVSHNITFESP True H1975_Epitope_Rep3 1186.56185172074 1186.56019490379 22.832 3 -1.5594718134782428 0.4240134245042865 1.0 ['ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 104685 14381 SQTSLQKEI True PC9_epitope_Rep3 1032.54513902744 1032.5440499358601 60.409 2 -1.559552643551318 0.42402209768179794 1.0 ['ENSG00000101966|ENST00000371199|XIAP'] 119369 7771 VAPGDRVLVR True PC9_epitope_Rep4 1080.64037682496 1080.63926993586 37.288 2 -1.5595811347422384 0.42402209768179794 1.0 ['ARFGEF2|p.W1325L|1|0.45|ENSG00000124198|chr20:49013619-49013619|G/T|missense_variant'] 97223 4312 SDYSFSVIAMS True PC9_epitope_Rep4 1205.52744035797 1205.52634993586 23.005 2 -1.5595901371709098 0.42402209768179794 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 47362 10381 IVGSPGSRLEK True H1975_Epitope_Rep3 1141.64552177505 1141.6444299358602 44.987 2 -1.5596315835293657 0.42402209768179794 1.0 ['ENSG00000124772|ENST00000244751|CPNE5'] 44827 10928 INDSIVYL True PC9_epitope_Rep1 935.49639792987 935.49530993586 46.92 2 -1.5596997053901451 0.42402209768179794 1.0 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1', 'ENST00000400423.6_1_21:43540943-43557727:+|nuORF'] 142935 18182 YYYRDRDWRWV True NCI_RA007_Epitope_Rep2 1676.7848092125198 1676.78370993586 75.482 2 -1.5597115620855575 0.42402209768179794 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 42770 8579 IEMTEKEWKYY True H1975_Epitope_Rep1 1518.7064673490997 1518.70536993586 37.926 2 -1.5597180096983885 0.42402209768179794 1.0 ['ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.H1950Mfs*14|1|0.33|ENSG00000196569|chr6:129403942-129403942|C/-|frameshift_variant'] 58713 12592 LERRTIQDSPH True H1975_Epitope_Rep3 1350.70041088222 1350.6993099358601 53.637 2 -1.5597575212773798 0.42402209768179794 1.0 ['ENSG00000006695|ENST00000261643|COX10'] 73103 20618 MRGGGQVG True NCI_RA007_Epitope_Rep4 760.3650069208398 760.36390993586 89.305 2 -1.5598015102655975 0.42402209768179794 1.0 ['ENST00000567999.5_1_16:90015111-90020668:+|nuORF'] 72549 10739 MLLIEQLRMEY True PC9_epitope_Rep1 1437.73599365557 1437.73435490379 46.194 3 -1.5598071016597268 0.42402209768179794 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A', 'nc|ENSG00000291090|Q3MJ40|CCDC144BP', 'nc|ENSG00000266302|A2RUR9-3|CCDC144A'] 3165 12058 AGDSSSHR True H1975_Epitope_Rep3 815.3521933076701 815.35164496793 51.543 1 -1.5600266313027433 0.4240466597422757 1.0 ['ENSG00000104450|ENST00000388798|SPAG1'] 57213 11811 LDVTEQISRF True H1975_Epitope_Rep3 1206.6244519772997 1206.62334993586 50.578 2 -1.5601277682149686 0.4240466597422757 1.0 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000564208.5_1_16:84215181-84220577:-|nuORF', 'ENST00000537450.5_1_16:84215181-84219087:-|nuORF', 'ENST00000564774.5_1_16:84215181-84218621:-|nuORF'] 16699 4692 EERRRYFGEK True NCI_RA007_Epitope_Rep5 1368.68984619852 1368.6887499358602 24.734 2 -1.5602909866915116 0.4240632739474315 1.0 ['TRIM32|p.D148Y|1|0.14|ENSG00000119401|chr9:116698184-116698184|G/T|missense_variant'] 121234 8707 VETDNGREAI True PC9_epitope_Rep6 1102.5254662120199 1102.52436993586 43.348 2 -1.5602918455959445 0.4240632739474315 1.0 ['ASCC3|p.G82E|1|0.17|ENSG00000112249|chr6:100848704-100848704|C/T|missense_variant'] 45270 21587 IPVMVQQLE True H1975_Epitope_Rep3 1055.5685173243098 1055.56740993586 90.2 2 -1.5603048509468689 0.4240632739474315 1.0 ['ENSG00000197763|ENST00000524230|TXNRD3', 'ENST00000524230.6_3_3:126326756-126373974:-|nuORF'] 83608 21827 PVDFHTSS True NCI_RA007_Epitope_Rep4 888.3977465177601 888.39664993586 94.617 2 -1.560313201549074 0.4240632739474315 1.0 ['NRG1|p.P442S|1|0.05|ENSG00000157168|chr8:32763803-32763803|C/T|missense_variant'] 113595 13541 TLVFYRGQMD True PC9_epitope_Rep4 1228.5910436740398 1228.5899499358602 59.981 2 -1.560348592156787 0.4240632739474315 1.0 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 41794 5367 IASDGSIPV True PC9_epitope_Rep4 857.44944773745 857.44834993586 27.365 2 -1.5603537985733356 0.4240632739474315 1.0 ['ENSG00000051382|ENST00000674063|PIK3CB'] 135473 18091 WIFRPLYLFFF True PC9_epitope_Rep3 1547.8329286219093 1547.83182993586 74.784 2 -1.5603655851159108 0.4240636340812088 1.0 ['ENST00000508170.5_1_4:55131036-55131279:+|nuORF'] 102133 8665 SLRPMQKE True NCI_RA007_Epitope_Rep4 987.51715045779 987.51604993586 40.115 2 -1.560408737857802 0.4240636340812088 1.0 ['ENST00000394532.7_1_11:64037551-64037644:-|nuORF'] 36423 16402 GVFTTQTN True PC9_epitope_Rep3 866.4133965819001 866.41228993586 68.229 2 -1.560440085584516 0.4240636340812088 1.0 ['nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C'] 123532 13724 VGPPGCNG True NCI_RA007_Epitope_Rep5 699.30100968195 699.3004649679301 59.475 1 -1.5604606310948834 0.4240636340812088 1.0 ['COL5A2|p.S1039C|1|0.09|ENSG00000204262|chr2:189049378-189049378|G/C|missense_variant'] 28209 17666 FREIWKNRYVV True PC9_epitope_Rep6 1508.82521747252 1508.8241299358601 80.591 2 -1.5606782630091167 0.4240636340812088 1.0 ['ENSG00000023902|ENST00000369124|PLEKHO1', 'nc|ENSG00000023902|Q53GL0-2|PLEKHO1', 'ENST00000492304.1_1_1:150123092-150125090:+|nuORF'] 127829 11814 VPETKDVKK True PC9_epitope_Rep4 1042.60225998074 1042.60116993586 53.21 2 -1.5606977984863477 0.4240636340812088 1.0 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2'] 113043 9780 TLNIYQNLNR True NCI_RA007_Epitope_Rep2 1247.66223446835 1247.6611299358601 42.664 2 -1.5606999620132922 0.4240636340812088 1.0 ['nc|ENSG00000133256|P35913-3|PDE6B', 'ENSG00000133256|ENST00000496514|PDE6B', 'nc|ENSG00000133256|P35913-2|PDE6B'] 67139 9380 LSQQDKRRGNH True H1975_Epitope_Rep3 1337.6912431808498 1337.69014993586 41.08 2 -1.56081309894244 0.4240653672342174 1.0 ['THSD7A|p.Q451H|1|0.24|ENSG00000005108|chr7:11590560-11590560|C/G|missense_variant'] 108027 12354 SWYKPWTKTL True NCI_RA007_Epitope_Rep5 1308.6866583110398 1308.68500490379 54.166 3 -1.5608398613626047 0.4240653672342174 1.0 ['ENSG00000111058|ENST00000548058|ACSS3', 'ACSS3|p.V232*|1|0.15|ENSG00000111058|chr12:81139177-81139177|G/-|frameshift_variant'] 13915 7795 DQVVVDNVFPN True NCI_RA007_Epitope_Rep1 1244.6037165327198 1244.60260993586 34.311 2 -1.560918023213371 0.4240754053838166 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF'] 12898 12552 DLITSTKNEKI True NCI_RA007_Epitope_Rep3 1260.69253153712 1260.69142993586 56.613 2 -1.5609640588752394 0.4240754053838166 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 10628 5610 CNYRDVRF True PC9_epitope_Rep5 1071.4919983391098 1071.4909099358601 26.582 2 -1.5609868398441678 0.4240754053838166 1.0 ['ENSG00000267631|ENST00000301407|CGB1', 'ENSG00000104818|ENST00000359342|CGB2', 'ENSG00000213030|ENST00000448456|CGB8', 'ENSG00000196337|ENST00000684222|CGB7', 'ENSG00000189052|ENST00000301408|CGB5', 'ENSG00000104827|ENST00000357383|CGB3', 'nc|ENSG00000213030|P0DN86-2|CGB3', 'nc|ENSG00000267631|A6NKQ9|CGB1'] 44747 19796 ILYGYRWP True PC9_epitope_Rep3 1066.56000124594 1066.5589099358601 81.378 2 -1.5610113571852082 0.4240754053838166 1.0 ['ENSG00000102468|ENST00000542664|HTR2A'] 27945 7216 FQEHKTEKPSL True NCI_RA007_Epitope_Rep3 1342.6881148630198 1342.68700993586 35.496 2 -1.5610573731186186 0.4240754053838166 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 110490 6277 TFGGLGSL True PC9_epitope_Rep4 750.39120458534 750.39010993586 31.2 2 -1.5611247183085988 0.42408370989091243 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 94811 16684 RSRAGPVL True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50752993586 72.349 2 -1.5611706146077704 0.42408370989091243 1.0 ['ENST00000292377.3_1_7:99768105-99769260:-|nuORF', 'ENST00000590234.5_1_18:47810059-47811374:-|nuORF'] 121451 13819 VEWVLEEVAQ True PC9_epitope_Rep2 1200.60265390356 1200.60154993586 58.437 2 -1.5611994741914539 0.42408370989091243 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF', 'ENST00000482974.1_1_3:50614485-50617422:+|nuORF'] 44672 12128 ILSTMLTLTF True PC9_epitope_Rep3 1138.6307832277 1138.6296899358601 51.692 2 -1.5613582152023318 0.42409028150210526 1.0 ['ENSG00000164744|ENST00000297325|SUN3'] 137992 5121 YFRFELLRTR True PC9_epitope_Rep2 1399.7724536236697 1399.7707949037901 25.074 3 -1.5615343964548303 0.42413108468929006 1.0 ['NALCN|p.P163L|1|0.33|ENSG00000102452|chr13:101376944-101376944|G/A|missense_variant'] 32153 12369 GEVIIPKE True H1975_Epitope_Rep1 883.5014833103099 883.5009349679301 52.608 1 -1.5616542119734425 0.4241328160657234 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 30534 20874 GAGPGHGY True H1975_Epitope_Rep1 714.30853759054 714.3079849679301 86.735 1 -1.5616554226953572 0.4241328160657234 1.0 ['ENST00000466012.5_1_2:219142848-219157252:-|nuORF'] 113834 9035 TNFLFIVMV True NCI_RA007_Epitope_Rep2 1082.58343911246 1082.58234993586 39.745 2 -1.5616918153395611 0.42414595741767647 1.0 ['ENST00000262605.8_1_20:43119153-43119294:+|nuORF'] 75321 17562 NINFSLQGEDC True PC9_epitope_Rep5 1238.52375195986 1238.52264993586 72.56 2 -1.5617315497907747 0.42414595741767647 1.0 ['CA10|p.K308E|1|0.04|ENSG00000154975|chr17:51633518-51633518|T/C|missense_variant'] 84052 20171 PVVVDSSS True PC9_epitope_Rep6 788.39159850816 788.39050993586 90.261 2 -1.5620078046178483 0.42419332755237094 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 94931 6584 RTFWYWNYNYY True NCI_RA007_Epitope_Rep2 1674.7255630008997 1674.72391490379 30.222 3 -1.5620137892564243 0.42419332755237094 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 27065 14216 FLFPHCLL True PC9_epitope_Rep1 988.52044493308 988.51934993586 59.504 2 -1.5621919826076278 0.4242016269809577 1.0 ['ENST00000426981.5_2_2:128396458-128396839:-|nuORF'] 91747 20007 RKFGRFLKMI True NCI_RA007_Epitope_Rep5 1294.7696171726998 1294.76797490379 83.874 3 -1.5622608801955196 0.4242016269809577 1.0 ['ENST00000395603.7_1_X:76907692-76907743:-|nuORF'] 353 5145 AAKANSWLE True PC9_epitope_Rep6 988.4977949121999 988.49668993586 27.513 2 -1.562261809398481 0.4242016269809577 1.0 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1'] 53468 21433 KRGLFRRIRWQ True NCI_RA007_Epitope_Rep2 1514.9058678350598 1514.90476993586 88.697 2 -1.5623850685479326 0.4242081964220518 1.0 ['ENST00000404875.6_1_9:134378440-134382761:+|nuORF'] 30535 20768 GAGPGHGY True H1975_Epitope_Rep3 714.30853759054 714.3079849679301 86.773 1 -1.5626274740936519 0.4242375839998175 1.0 ['ENST00000466012.5_1_2:219142848-219157252:-|nuORF'] 32577 11492 GGGTCHRC True H1975_Epitope_Rep2 789.3010267652899 789.3004749679301 49.259 1 -1.562644042838574 0.4242393127288907 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 62029 10602 LLDRKTVA True PC9_epitope_Rep5 914.5549158655 914.55380993586 45.768 2 -1.5626764369802715 0.4242393127288907 1.0 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6'] 46077 8965 ISGVPSAVSL True PC9_epitope_Rep1 928.5229470308799 928.52184993586 39.329 2 -1.5627533863368483 0.4242524500017113 1.0 ['ENST00000305123.5_1_2:227662067-227662256:-|nuORF'] 58492 10116 LEQDQLWIGTK True H1975_Epitope_Rep1 1329.6928658902896 1329.69176993586 43.847 2 -1.5627613684349217 0.4242524500017113 1.0 ['ENST00000563366.5_1_16:23573052-23581908:+|nuORF', 'ENSG00000103353|ENST00000395878|UBFD1'] 28628 17804 FSISSKTSNHY True PC9_epitope_Rep4 1269.5989655054502 1269.5978699358602 76.516 2 -1.562777411581994 0.42425417831270323 1.0 ['ENSG00000214891|ENST00000617704|TRIM64C'] 20183 11473 ENGTLKRQLD True PC9_epitope_Rep1 1172.61494992276 1172.6138499358601 49.011 2 -1.5627945055632724 0.42425417831270323 1.0 ['ENSG00000118217|ENST00000367942|ATF6', 'ATF6|p.N437Tfs*15|1|0.29|ENSG00000118217|chr1:161846567-161846567|A/-|frameshift_variant'] 130366 5897 VSKSQKIR True NCI_RA007_Epitope_Rep4 944.5767139392399 944.57560993586 29.306 2 -1.5628779387405398 0.4242624746172625 1.0 ['ENST00000571277.1_1_16:11655255-11655408:-|nuORF'] 61321 23319 LIRFRFLRV True PC9_epitope_Rep6 1218.77133142486 1218.77022993586 102.8 2 -1.5629050406740534 0.4242624746172625 1.0 ['ENST00000397086.6_2_16:2303455-2303809:-|nuORF'] 39998 10037 HPPPLAFL True H1975_Epitope_Rep2 890.50142374066 890.50032993586 43.599 2 -1.5629113712493958 0.4242624746172625 1.0 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 61959 12554 LLDLPTVVP True NCI_RA007_Epitope_Rep2 965.57973363101 965.57862993586 53.447 2 -1.5629482017267124 0.42426420260095826 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 104598 18506 SQRQIRKSR True NCI_RA007_Epitope_Rep4 1157.67413656473 1157.67302993586 80.096 2 -1.5629595656224446 0.42426420260095826 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 74523 16811 NFLGFYLWMKI True H1975_Epitope_Rep3 1430.74206501218 1430.7409699358602 70.215 2 -1.5630486841473719 0.4242742257457366 1.0 ['ENSG00000104237|ENST00000220676|RP1'] 416 17395 AALIVLTE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 73.69 2 -1.563199664149348 0.4242742257457366 1.0 ['nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 83515 4901 PTTDVEKMFSV True H1975_Epitope_Rep3 1252.6009396514 1252.5998499358602 23.98 2 -1.5632084622486768 0.4242742257457366 1.0 ['ENST00000394964.3_1_14:63416779-63568536:-|nuORF', 'nc|ENSG00000140015|Q8NCM2-2|KCNH5', 'nc|ENSG00000140015|Q8NCM2-3|KCNH5', 'ENSG00000140015|ENST00000322893|KCNH5'] 120048 7458 VDSPPSGGGW True H1975_Epitope_Rep3 957.4192102383299 957.41810993586 33.665 2 -1.563221763708223 0.4242742257457366 1.0 ['FAM114A1|p.E412Rfs*27|1|0.09|ENSG00000197712|chr4:38931521-38931522|-/T|frameshift_variant', 'ENSG00000197712|ENST00000358869|FAM114A1'] 94113 25296 RRLQELFAV True PC9_epitope_Rep2 1130.6560268890998 1130.65492993586 102.97 2 -1.5632495273262719 0.4242742257457366 1.0 ['ENST00000340291.6_1_9:35812160-35812229:-|nuORF'] 27956 6036 FQERNREHERH True PC9_epitope_Rep3 1536.7294195947197 1536.72778490379 28.269 3 -1.5633172016363255 0.4242987669248406 1.0 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7', 'ENST00000537641.5_1_11:61178417-61183276:-|nuORF'] 112011 9539 TIRTTTSPFF True NCI_RA007_Epitope_Rep1 1169.6080736371698 1169.6069699358602 41.102 2 -1.5633299660438944 0.4242987669248406 1.0 ['nc|ENSG00000151612|Q17R98-2|ZNF827', 'ENSG00000151612|ENST00000508784|ZNF827', 'nc|ENSG00000151612|Q17R98-3|ZNF827'] 121406 20332 VEVTEEHKP True NCI_RA007_Epitope_Rep1 1066.5294889633 1066.52897496793 83.296 1 -1.5633922073612592 0.4243004939032041 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant'] 97078 22223 SDFFPGGPGL True NCI_RA007_Epitope_Rep5 992.4603467743198 992.45924993586 92.629 2 -1.5634537132360025 0.4243004939032041 1.0 ['ENST00000510104.5_1_5:140071123-140075505:+|nuORF'] 33907 15560 GLQMASRYTV True PC9_epitope_Rep2 1124.5648289261999 1124.56372993586 65.126 2 -1.5635525622702646 0.42430706056803924 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 36162 13908 GVARVLREMWS True NCI_RA007_Epitope_Rep1 1302.6866753943798 1302.68617496793 58.121 1 -1.5636620695030112 0.4243239852651027 1.0 ['ENST00000541683.1_1_11:61582434-61582803:-|nuORF', 'ENST00000545245.5_2_11:61580788-61582536:-|nuORF'] 124028 9782 VGSGLAGREL True PC9_epitope_Rep3 957.52434401321 957.52324993586 42.581 2 -1.5637450382682332 0.4243239852651027 1.0 ['ENSG00000156959|ENST00000287585|LHFPL4'] 141997 17077 YVIYSRSVL True PC9_epitope_Rep6 1098.60734536118 1098.6062499358602 78.255 2 -1.5637982873244842 0.4243239852651027 1.0 ['ENSG00000177938|ENST00000317658|CAPZA3'] 58511 5292 LEQERWQREMM True NCI_RA007_Epitope_Rep4 1534.7020677583398 1534.7004149037898 26.908 3 -1.563812003860572 0.4243239852651027 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 80203 11231 PFYNESFS True H1975_Epitope_Rep2 989.4130622287299 989.41196993586 48.242 2 -1.5639584232392654 0.4243239852651027 1.0 ['ENSG00000103528|ENST00000355377|SYT17'] 114187 23088 TPLFIPAKT True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 96.424 2 -1.5639758620200663 0.4243239852651027 1.0 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3'] 23136 18491 EVKKKRWNRSK True NCI_RA007_Epitope_Rep1 1457.8579145831297 1457.8568099358602 76.065 2 -1.5639781522033833 0.4243239852651027 1.0 ['ENST00000457507.1_1_1:99473841-99474009:+|nuORF'] 142467 21005 YYHISSSA True H1975_Epitope_Rep2 926.4133965819 926.41228993586 86.947 2 -1.5639998459892077 0.4243239852651027 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 65605 18324 LRWLLPWAQNR True NCI_RA007_Epitope_Rep2 1451.8149871419898 1451.81388993586 76.031 2 -1.5640962518318375 0.4243239852651027 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 72453 23577 MKTERPPA True NCI_RA007_Epitope_Rep3 928.4800366730798 928.47892993586 102.28 2 -1.5641174750358164 0.4243239852651027 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.W2883Lfs*11|1|0.24|ENSG00000181143|chr19:8972491-8972492|-/A|frameshift_variant', 'MUC16|p.T2979Lfs*26|1|0.59|ENSG00000181143|chr19:8972205-8972205|G/-|frameshift_variant', 'MUC16|p.A1487Cfs*12|1|0.29|ENSG00000181143|chr19:8976680-8976681|-/A|frameshift_variant', 'MUC16|p.S2365Qfs*9|1|0.2|ENSG00000181143|chr19:8974047-8974047|G/-|frameshift_variant', 'MUC16|p.W2468Lfs*16|1|0.1|ENSG00000181143|chr19:8973699-8973738|GCTGACCATGGTGCTGAAAGTTCTTACTGGTCTAGACCAG/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 121130 17449 VERRRLERRT True NCI_RA007_Epitope_Rep3 1369.8014623361696 1369.80036993586 76.555 2 -1.5641247395190707 0.4243239852651027 1.0 ['ENSG00000133030|ENST00000651222|MPRIP'] 136577 14986 WWHRHHAWMTY True H1975_Epitope_Rep3 1609.71495583089 1609.71384993586 63.031 2 -1.5641290638920853 0.4243239852651027 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 32949 18008 GICPSLSAMK True PC9_epitope_Rep3 1005.49872351233 1005.49762993586 74.471 2 -1.5641439123449385 0.4243239852651027 1.0 ['PAXIP1|p.T990A|1|0.23|ENSG00000157212|chr7:154946768-154946768|T/C|missense_variant'] 15779 9691 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.6909299358601 41.696 2 -1.5641924314271576 0.42432571135313907 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 125888 14139 VLARVPKKL True PC9_epitope_Rep5 1022.6964351490999 1022.6953299358601 59.397 2 -1.564214091879155 0.42432571135313907 1.0 ['ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 135053 20296 WDWWHRRRRRT True NCI_RA007_Epitope_Rep1 1709.8875920019698 1709.88648993586 83.155 2 -1.5642905189017582 0.42435508519033827 1.0 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 102232 6263 SLSFNTRLK True NCI_RA007_Epitope_Rep2 1064.59784330664 1064.59674993586 28.966 2 -1.5643592109418225 0.4243633751097629 1.0 ['ENST00000487841.5_1_6:166738023-166743732:-|nuORF', 'ENSG00000198818|ENST00000361731|SFT2D1'] 28225 22192 FRICNLTRP True PC9_epitope_Rep4 1118.60188314126 1118.6007899358601 93.607 2 -1.564410305637532 0.4243633751097629 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 3152 5291 AGDISNSREL True PC9_epitope_Rep2 1060.51490152832 1060.51380993586 25.74 2 -1.564418218140189 0.4243633751097629 1.0 ['ROBO3|p.S27R|1|0.33|ENSG00000154134|chr11:124865658-124865658|C/A|missense_variant'] 123197 12274 VGLDLERR True H1975_Epitope_Rep3 956.54032843052 956.53922993586 52.39 2 -1.564505830612769 0.4243651001813185 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 120923 14652 VENVKHVI True PC9_epitope_Rep2 936.5392658013599 936.53816993586 61.625 2 -1.5646370977175326 0.4243651001813185 1.0 ['ENSG00000100941|ENST00000216832|PNN'] 53204 9229 KQEITQNKSFF True H1975_Epitope_Rep3 1368.70376492716 1368.70266993586 40.491 2 -1.5648030853936241 0.42437822859293217 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2'] 36109 9716 GVAHGCTR True NCI_RA007_Epitope_Rep2 799.3759059577101 799.37480993586 42.412 2 -1.5648673662411985 0.42437822859293217 1.0 ['ENSG00000128683|ENST00000358196|GAD1', 'nc|ENSG00000128683|Q99259-3|GAD1', 'nc|ENSG00000128683|Q99259-4|GAD1'] 114535 10342 TQAPLALTPLP True H1975_Epitope_Rep3 1120.6492101731599 1120.64810993586 44.833 2 -1.5649828495355884 0.4243913564057244 1.0 ['ENST00000563592.5_1_15:73075590-73075839:+|nuORF'] 29971 25338 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 105.0 3 -1.5649959488819714 0.4243913564057244 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 93869 12941 RREPLLNHL True NCI_RA007_Epitope_Rep3 1146.6621748987 1146.66052490379 58.177 3 -1.565092577220108 0.4244013683010262 1.0 ['DEPDC7|p.S312R|1|0.42|ENSG00000121690|chr11:33031531-33031531|T/A|missense_variant'] 125371 21134 VIRGGATR True PC9_epitope_Rep3 828.49298431528 828.49188993586 86.577 2 -1.5651584994541452 0.4244013683010262 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 12978 23863 DLLPLSLIPV True PC9_epitope_Rep3 1078.66379760814 1078.6627099358602 97.076 2 -1.5651906647098375 0.4244013683010262 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2'] 20849 10936 EQKNASMF True PC9_epitope_Rep1 953.4276667470499 953.42656993586 46.953 2 -1.5652129829767938 0.4244013683010262 1.0 ['CACNA1E|p.P1897S|1|0.19|ENSG00000198216|chr1:181785722-181785722|C/T|missense_variant'] 68195 14812 LTDTEIRI True PC9_epitope_Rep2 959.52876068731 959.52766993586 62.239 2 -1.5652342315876975 0.4244013683010262 1.0 ['ENSG00000091106|ENST00000402280|NLRC4', 'nc|ENSG00000091106|Q9NPP4-2|NLRC4'] 34228 17229 GNNRGYAFV True NCI_RA007_Epitope_Rep5 996.4777281739599 996.47662993586 73.045 2 -1.5654807098383916 0.4244258967868464 1.0 ['A1CF|p.N370Kfs*11|1|0.32|ENSG00000148584|chr10:50816037-50816038|-/T|frameshift_variant', 'A1CF|p.Q351Rfs*34|1|0.22|ENSG00000148584|chr10:50816096-50816096|G/-|frameshift_variant', 'A1CF|p.L439*|1|0.15|ENSG00000148584|chr10:50813888-50813888|A/-|frameshift_variant', 'nc|ENSG00000148584|Q9NQ94-5|A1CF', 'nc|ENSG00000148584|Q9NQ94-6|A1CF', 'nc|ENSG00000148584|Q9NQ94-3|A1CF', 'ENSG00000148584|ENST00000373997|A1CF', 'nc|ENSG00000148584|Q9NQ94|A1CF', 'nc|ENSG00000148584|Q9NQ94-4|A1CF'] 133395 13981 VVVLLSAE True NCI_RA007_Epitope_Rep4 828.49566965388 828.49456993586 61.05 2 -1.5654911467944226 0.4244258967868464 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant'] 24208 11140 EYRQRRERNNI True NCI_RA007_Epitope_Rep1 1532.7920198512795 1532.79092993586 47.331 2 -1.565597469297576 0.4244438616694982 1.0 ['ENSG00000221869|ENST00000408965|CEBPD'] 10723 18767 CRVIVLEKLPV True NCI_RA007_Epitope_Rep3 1267.76861411319 1267.76695490379 82.066 3 -1.5656971276903395 0.42444730751251325 1.0 ['ENSG00000124535|ENST00000380773|WRNIP1', 'nc|ENSG00000124535|Q96S55-2|WRNIP1', 'nc|ENSG00000124535|Q96S55-3|WRNIP1'] 58819 9449 LESPTRSLV True H1975_Epitope_Rep2 1000.55530978832 1000.55420993586 41.313 2 -1.5657245904452568 0.42444730751251325 1.0 ['nc|ENSG00000170624|Q92629-3|SGCD', 'nc|ENSG00000170624|Q92629|SGCD', 'ENSG00000170624|ENST00000337851|SGCD'] 66417 12781 LSGLPDTVFEI True PC9_epitope_Rep4 1189.6230549949698 1189.6219499358601 57.024 2 -1.5657347047103671 0.42444730751251325 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 81044 24971 PIPHLVLT True H1975_Epitope_Rep3 888.54328855264 888.54218993586 103.87 2 -1.5657360492449763 0.42444730751251325 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 25920 9182 FFQVGFVSV True H1975_Epitope_Rep3 1028.5331177917597 1028.53202993586 40.309 2 -1.5657911526577697 0.4244490303161591 1.0 ['ENSG00000155850|ENST00000286298|SLC26A2'] 137930 2815 YFDLQRRLMI True NCI_RA007_Epitope_Rep2 1353.7227265499298 1353.7210949037901 15.278 3 -1.5658652566171103 0.4244490303161591 1.0 ['ENST00000431657.5_1_3:44409097-44442080:+|nuORF', 'nc|ENSG00000179152|Q8N3R3-4|TCAIM', 'ENSG00000179152|ENST00000342649|TCAIM'] 53733 24 KSNTPAAH True H1975_Epitope_Rep1 824.41406528824 824.41296993586 0.1132 2 -1.5659553075895285 0.4244669935013111 1.0 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L'] 27664 11259 FPGFDWFFLDP True PC9_epitope_Rep1 1386.62847472858 1386.62683490379 48.187 3 -1.566018809178308 0.4244963573554058 1.0 ['nc|ENSG00000100997|Q8N2K0-3|ABHD12', 'ENSG00000100997|ENST00000339157|ABHD12', 'nc|ENSG00000100997|Q8N2K0-2|ABHD12'] 61660 6243 LKRLKAKKP True PC9_epitope_Rep2 1080.74953335112 1080.74842993586 29.411 2 -1.5660741629870385 0.42451604076886246 1.0 ['ENST00000373465.2_1_X:46278605-46278842:-|nuORF'] 108308 14247 SYIRWPVPI True PC9_epitope_Rep5 1129.62841515893 1129.62676490379 59.806 3 -1.5661504031988889 0.42451604076886246 1.0 ['ENSG00000242732|ENST00000609883|RTL5'] 93876 5829 RREQDWHGWQF True H1975_Epitope_Rep1 1543.70689324499 1543.7052449037901 27.492 3 -1.5661720958423653 0.42451604076886246 1.0 ['ENST00000499291.6_1_12:11710149-11716643:+|nuORF'] 95263 22029 RVPCLIPP True PC9_epitope_Rep1 893.5156939058099 893.51458993586 89.549 2 -1.5662182420760324 0.42452916229650234 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 62215 15160 LLETRGVVL True PC9_epitope_Rep3 998.6124307416198 998.61132993586 63.455 2 -1.5662294036590931 0.42452916229650234 1.0 ['ENSG00000117593|ENST00000649689|DARS2'] 125016 7147 VIASAQPW True H1975_Epitope_Rep3 870.4599528515 870.45884993586 32.463 2 -1.566338638932157 0.4245471231346261 1.0 ['ENST00000527348.1_1_11:65770323-65770707:+|nuORF', 'ENST00000530204.1_1_11:65770323-65770533:+|nuORF'] 71504 23546 LYYPEIKDK True H1975_Epitope_Rep1 1167.6175756917098 1167.61594490379 97.812 3 -1.566517224372313 0.42456508356323674 1.0 ['nc|ENSG00000109320|P19838|NFKB1', 'ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 96869 6578 SASTYTRP True PC9_epitope_Rep2 881.4242956187699 881.42318993586 30.715 2 -1.5666070183395615 0.4245864824504406 1.0 ['ENST00000596769.1_1_19:53510963-53514048:+|nuORF'] 42301 20383 IDWAHHFKKSP True H1975_Epitope_Rep1 1364.6989543302398 1364.6978499358602 84.772 2 -1.566609842880577 0.4245864824504406 1.0 ['ENST00000480769.5_1_1:185266844-185267009:-|nuORF'] 92217 24927 RLIHIILLP True PC9_epitope_Rep3 1086.72773527738 1086.72662993586 101.25 2 -1.5666315346656898 0.4245864824504406 1.0 ['ENST00000548213.2_1_14:29242013-29282281:+|nuORF'] 124014 14285 VGSGAQGA True NCI_RA007_Epitope_Rep3 645.30820323737 645.30765496793 63.514 1 -1.566767350791139 0.4245864824504406 1.0 ['MAP3K12|p.K398Sfs*10|1|0.61|ENSG00000139625|chr12:53483979-53483979|A/-|frameshift_variant', 'MAP3K12|p.I490Sfs*29|1|0.13|ENSG00000139625|chr12:53483396-53483396|A/-|frameshift_variant', 'MAP3K12|p.S536Hfs*45|1|0.22|ENSG00000139625|chr12:53483099-53483099|G/-|frameshift_variant', 'nc|ENSG00000139625|Q12852|MAP3K12', 'ENSG00000139625|ENST00000547488|MAP3K12', 'ENST00000547020.1_1_12:53880221-53880452:-|nuORF'] 55676 7609 LALFGRAS True PC9_epitope_Rep4 833.47593726881 833.47484993586 36.649 2 -1.5668383541221873 0.4245864824504406 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000529976.5_1_20:57290178-57290379:+|nuORF'] 106307 6158 STFQVFQE True PC9_epitope_Rep2 984.4552613938798 984.45416993586 29.08 2 -1.5669656277366926 0.42460444120195157 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 61081 26036 LIHGTADD True PC9_epitope_Rep3 840.39774651776 840.39664993586 106.03 2 -1.5670309628470125 0.4246081951330712 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 109506 13332 TDPAGGLC True NCI_RA007_Epitope_Rep3 732.3112400124801 732.3106949679301 59.71 1 -1.5670838707738515 0.4246081951330712 1.0 ['ENST00000430365.6_1_3:11643369-11685017:-|nuORF'] 92222 18107 RLKAGHGG True H1975_Epitope_Rep2 794.4511195032999 794.45002993586 75.036 2 -1.5670984065412734 0.4246081951330712 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 98494 6882 SFKIEEPHEA True H1975_Epitope_Rep3 1185.56660274801 1185.56494490379 31.43 3 -1.567136172574283 0.4246081951330712 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'MAP2|p.E1172*|1|0.31|ENSG00000078018|chr2:209695683-209695684|-/T|frameshift_variant', 'MAP2|p.I1173Yfs*12|1|0.41|ENSG00000078018|chr2:209695685-209695685|A/-|frameshift_variant', 'MAP2|p.N615Mfs*67|1|0.26|ENSG00000078018|chr2:209694010-209694010|A/-|frameshift_variant'] 83958 23270 PVRRQRGRR True PC9_epitope_Rep5 1179.7173387893897 1179.71624993586 94.494 2 -1.5671490706742346 0.4246081951330712 1.0 ['RNF38|p.R131H|1|0.17|ENSG00000137075|chr9:36369897-36369897|C/T|missense_variant', 'nc|ENSG00000137075|Q9H0F5-3|RNF38', 'nc|ENSG00000137075|Q9H0F5-4|RNF38', 'nc|ENSG00000137075|Q9H0F5-2|RNF38', 'ENSG00000137075|ENST00000259605|RNF38'] 43546 6656 IGQNMGNQ True PC9_epitope_Rep5 860.3810509078 860.3799499358599 30.574 2 -1.5671634675971682 0.4246081951330712 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-1|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-2|TNRC6C'] 34489 12119 GPLLVLSV True NCI_RA007_Epitope_Rep4 796.50584041476 796.50474993586 53.612 2 -1.5672283005434762 0.4246081951330712 1.0 ['ENST00000286353.8_2_3:141012052-141012157:+|nuORF'] 141204 14922 YSYRQRERERE True H1975_Epitope_Rep3 1570.76005101666 1570.75894993586 62.784 2 -1.567240422414378 0.4246081951330712 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 123320 23911 VGLREKLHRT True PC9_epitope_Rep3 1207.7149387475497 1207.71384993586 97.26 2 -1.5672488655853847 0.4246081951330712 1.0 ['ENST00000588075.5_3_17:76993904-76996331:-|nuORF', 'ENST00000588611.5_1_17:76993706-77001537:-|nuORF', 'ENST00000586916.6_1_17:76993962-76996331:-|nuORF'] 29289 20720 FVAWVFSSLP True PC9_epitope_Rep2 1151.60153170475 1151.6004299358601 85.138 2 -1.5672614894383794 0.4246081951330712 1.0 ['ENST00000313552.10_1_2:242668082-242668430:+|nuORF'] 21375 22250 ERHQLRKH True PC9_epitope_Rep5 1102.6108080321799 1102.60970993586 90.593 2 -1.567293849179997 0.4246081951330712 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766-4|RREB1'] 94848 19655 RSTNIKKA True NCI_RA007_Epitope_Rep2 916.5454138109599 916.54430993586 81.403 2 -1.5673895423821476 0.42462615118081515 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 56033 13160 LASPRPIL True PC9_epitope_Rep1 865.53853752537 865.53744993586 55.484 2 -1.5674413858325913 0.42463270911929973 1.0 ['ENSG00000185133|ENST00000331075|INPP5J'] 122663 7569 VGGDKPTF True PC9_epitope_Rep1 819.41266830591 819.41156993586 33.931 2 -1.5675476885243114 0.4246392669082952 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'ZSWIM4|p.Q790Rfs*107|1|0.35|ENSG00000132003|chr19:13830447-13830447|C/-|frameshift_variant'] 109409 7646 TDEKDKFV True PC9_epitope_Rep1 980.4814761417199 980.48036993586 34.233 2 -1.5676065226619031 0.42465722198794154 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 61928 15889 LLDGKNKITQ True PC9_epitope_Rep2 1128.65027280232 1128.64861490379 66.37 3 -1.5678591245154858 0.424690007293946 1.0 ['ENSG00000134202|ENST00000361066|GSTM3', 'ENST00000488824.1_1_1:110279695-110282569:-|nuORF'] 101236 10024 SLHPWPLQV True PC9_epitope_Rep5 1075.58146496651 1075.58036993586 43.537 2 -1.567873489188891 0.424690007293946 1.0 ['ENST00000260599.10_3_2:27309825-27310158:+|nuORF'] 140988 23015 YSHGITLV True NCI_RA007_Epitope_Rep3 888.4705175352 888.46942993586 100.04 2 -1.5679758023285237 0.424690007293946 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3', 'nc|ENSG00000120645|Q9UPP2-2|IQSEC3'] 52941 18352 KPGPLRRAH True NCI_RA007_Epitope_Rep1 1030.6148307834599 1030.6137299358602 75.521 2 -1.5681153919470585 0.424690007293946 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 27703 22557 FPLSPLAH True H1975_Epitope_Rep1 880.48068829608 880.47958993586 93.819 2 -1.568132629014344 0.424690007293946 1.0 ['MAST2|p.I1341F|1|0.28|ENSG00000086015|chr1:46034690-46034690|A/T|missense_variant'] 114173 23447 TPKRRRLWR True PC9_epitope_Rep1 1267.7737910363498 1267.7726899358602 94.973 2 -1.5682570656217956 0.4247421505498889 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 85096 13041 QEKVSIPC True PC9_epitope_Rep4 902.4531532188998 902.45204993586 58.056 2 -1.5682758754397217 0.4247487064937433 1.0 ['ENST00000467077.1_1_3:142074209-142075845:-|nuORF'] 142415 9745 YYFCRWYRNRK True H1975_Epitope_Rep1 1653.7986854548496 1653.79758993586 42.414 2 -1.5683731194108153 0.4247780550902025 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 69839 14290 LVGVLAAH True H1975_Epitope_Rep3 778.4701236123801 778.46957496793 60.31 1 -1.5685709044698883 0.4248187992888727 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45002340-45002744:-|nuORF'] 52757 4957 KNEKVGSHGTQ True H1975_Epitope_Rep3 1183.5945488313498 1183.59344993586 24.195 2 -1.5687160161810754 0.42483846337933473 1.0 ['ENSG00000085741|ENST00000322563|WNT11'] 16674 19939 EERDGKDRE True PC9_epitope_Rep4 1132.5108787770398 1132.50978993586 84.831 2 -1.568741508880762 0.42483846337933473 1.0 ['ENSG00000197329|ENST00000358912|PELI1'] 113941 6395 TPAAGSGFP True PC9_epitope_Rep1 803.38136817763 803.38026993586 29.407 2 -1.568787814495078 0.42483846337933473 1.0 ['ENSG00000105738|ENST00000222345|SIPA1L3', 'SPINT2-SIPA1L3|2|fusion'] 125448 19873 VIVDRPLQV True PC9_epitope_Rep5 1037.6233297784897 1037.62222993586 81.493 2 -1.5688989412380867 0.4248401764042255 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'ENSG00000249158|ENST00000398640|PCDHA11', 'PCDHA9|p.F395Lfs*89|1|0.1|ENSG00000204961|chr5:140849673-140849674|-/G|frameshift_variant', 'ENSG00000204965|ENST00000529859|PCDHA5', 'nc|ENSG00000204969|Q9Y5H9-2|PCDHA2', 'nc|ENSG00000204965|Q9Y5H7-3|PCDHA5', 'nc|ENSG00000255408|Q9Y5H8-2|PCDHA3', 'nc|ENSG00000204969|Q9Y5H9-3|PCDHA2', 'nc|ENSG00000204965|Q9Y5H7-2|PCDHA5', 'nc|ENSG00000249158|Q9Y5I1-2|PCDHA11', 'PCDHA5|p.S433Yfs*167|1|0.23|ENSG00000204965|chr5:140823072-140823073|-/A|frameshift_variant', 'PCDHA5|p.E525Rfs*10|1|1.0|ENSG00000204965|chr5:140823348-140823348|G/-|frameshift_variant', 'PCDHA2|p.I359Sfs*31|1|0.19|ENSG00000204969|chr5:140796036-140796036|C/-|frameshift_variant', 'PCDHA2|p.N257Ifs*7|1|0.75|ENSG00000204969|chr5:140795733-140795734|-/T|frameshift_variant', 'PCDHA6|p.E107D|1|0.35|ENSG00000081842|chr5:140828412-140828412|G/T|missense_variant', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9', 'ENSG00000250120|ENST00000307360|PCDHA10', 'nc|ENSG00000250120|Q9Y5I2-3|PCDHA10', 'ENSG00000251664|ENST00000398631|PCDHA12', 'nc|ENSG00000251664|Q9UN75-2|PCDHA12'] 14017 23133 DRFHVSPDPSV True NCI_RA007_Epitope_Rep5 1254.59929985862 1254.59764490379 96.235 3 -1.5689002317590761 0.4248401764042255 1.0 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF', 'ENST00000561175.1_1_10:135085308-135086059:-|nuORF'] 137251 20443 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 85.572 2 -1.5689328816576722 0.4248467306333614 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 49789 21318 KHGFRDLRQ True NCI_RA007_Epitope_Rep4 1155.62612374315 1155.62446490379 92.412 3 -1.5689474438380269 0.4248532847131218 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1'] 123376 22106 VGMHSFLV True PC9_epitope_Rep6 888.4527592960799 888.4522149679301 97.973 1 -1.569269028060021 0.42490541957245087 1.0 ['ENSG00000119431|ENST00000374180|HDHD3'] 138344 4961 YHESDTFRGYF True PC9_epitope_Rep4 1420.60477916188 1420.60312490379 25.687 3 -1.5694725615919947 0.4249233679364609 1.0 ['ENST00000548843.1_1_12:58200052-58208006:-|nuORF', 'nc|ENSG00000135407|O75366-2|AVIL', 'ENST00000549851.5_1_12:58191667-58209405:-|nuORF', 'ENSG00000135407|ENST00000549994|AVIL'] 56989 6298 LDREQTDRYEF True H1975_Epitope_Rep3 1470.6739213508597 1470.6728299358601 29.23 2 -1.5695430455664892 0.4249267898041271 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 102189 9963 SLRWEPPA True PC9_epitope_Rep5 954.4923156089399 954.49120993586 43.298 2 -1.5695685303998261 0.4249267898041271 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-2|XIRP1', 'EPHA1|p.E420Kfs*34|1|0.41|ENSG00000146904|chr7:143398679-143398679|C/-|frameshift_variant', 'nc|ENSG00000146904|P21709-3|EPHA1', 'nc|ENSG00000146904|P21709-2|EPHA1', 'ENSG00000146904|ENST00000275815|EPHA1'] 94731 7484 RSFGGGCH True NCI_RA007_Epitope_Rep5 819.3446058294301 819.34350993586 35.468 2 -1.5695692129180845 0.4249267898041271 1.0 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'EIF4ENIF1|p.K486Mfs*6|1|0.41|ENSG00000184708|chr22:31454199-31454200|-/TGTTGAACGCA|frameshift_variant'] 422 18489 AALLLSGIPAE True H1975_Epitope_Rep1 1053.6070110080097 1053.6059099358602 77.075 2 -1.569576732284708 0.4249267898041271 1.0 ['ENSG00000164615|ENST00000297156|CAMLG'] 113660 15851 TLWEKRTAI True PC9_epitope_Rep4 1116.62914343492 1116.6280499358602 68.896 2 -1.5696708590851736 0.4249398949443387 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 68311 10741 LTEKLRKF True H1975_Epitope_Rep3 1033.6284151589298 1033.62730993586 46.395 2 -1.5697148685599092 0.4249398949443387 1.0 ['ENST00000598218.1_1_19:39823656-39826616:-|nuORF', 'ENSG00000130755|ENST00000597595|GMFG'] 122593 10535 VGFFPFLLLF True PC9_epitope_Rep4 1198.6790537494596 1198.67740490379 48.25 3 -1.5697612258870455 0.42494644729046077 1.0 ['ENST00000233813.4_1_2:217560055-217560226:-|nuORF'] 121915 21939 VFRRDQRL True PC9_epitope_Rep1 1088.6203100867199 1088.61920993586 89.206 2 -1.5698924749655692 0.42498233940250213 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 22973 10786 EVERVRRSERY True H1975_Epitope_Rep3 1477.7749728048097 1477.7738699358601 46.568 2 -1.5700490969855145 0.42498233940250213 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 135093 3256 WEDIAPEIEP True NCI_RA007_Epitope_Rep2 1197.5553693579698 1197.55426993586 17.322 2 -1.5700816355799 0.4249840488560751 1.0 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1', 'TP53BP1|p.I1039Rfs*3|1|0.48|ENSG00000067369|chr15:43438368-43438384|TTGCCTGGCTTCACAGA/-|frameshift_variant'] 65773 16550 LSDFRRRRSFR True H1975_Epitope_Rep3 1494.8280114371798 1494.8269099358602 69.157 2 -1.5700909384566784 0.4249840488560751 1.0 ['ENSG00000171522|ENST00000302472|PTGER4', 'ENST00000513635.1_1_5:40681836-40685490:+|nuORF'] 38682 21016 HFYLKEKKKK True PC9_epitope_Rep6 1347.8026911227896 1347.80104490379 93.662 3 -1.5701773600566746 0.4250019938702731 1.0 ['ENST00000342085.8_1_16:2647774-2647957:+|nuORF'] 96366 12114 RYVAVWRPL True PC9_epitope_Rep1 1158.66619764998 1158.66454490379 51.459 3 -1.570250480844894 0.4250427253047738 1.0 ['OR2G2|p.C130W|1|0.11|ENSG00000177489|chr1:247588749-247588749|C/G|missense_variant'] 123631 17141 VGQGVQAA True NCI_RA007_Epitope_Rep2 728.3817025307999 728.38115496793 71.412 1 -1.5702729763363106 0.42505582645946316 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 80738 4624 PHFKMNSAAPS True H1975_Epitope_Rep2 1185.56007789893 1185.55843490379 22.887 3 -1.5702998136132207 0.42505582645946316 1.0 ['nc|ENSG00000293473|B2RD01|CENPBD1P'] 136108 24690 WRLRVVARPLR True H1975_Epitope_Rep1 1420.8891551417596 1420.8880499358602 102.29 2 -1.5703560111094077 0.42506892701711213 1.0 ['ENST00000263708.6_1_2:120517626-120517854:+|nuORF'] 91563 3717 RIILKIPI True PC9_epitope_Rep2 964.6797224558 964.67862993586 19.565 2 -1.5704378974129918 0.42506892701711213 1.0 ['ENST00000260746.5_1_10:104449690-104459203:-|nuORF'] 89886 3633 RCAPRGKA True PC9_epitope_Rep1 857.4653896684499 857.46428993586 18.895 2 -1.570496686425138 0.4250868698376531 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 65997 14095 LSEAHAAC True NCI_RA007_Epitope_Rep5 800.34868815036 800.34758993586 60.906 2 -1.5705235921252314 0.4250971100504631 1.0 ['ENSG00000132702|ENST00000255039|HAPLN2'] 35184 11041 GRAAAAIPT True PC9_epitope_Rep5 826.4661008611 826.4655549679301 47.457 1 -1.570562361869031 0.4250971100504631 1.0 ['ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 82388 9402 PPLPAGFP True NCI_RA007_Epitope_Rep1 794.4326754745 794.43156993586 40.563 2 -1.5705972706452704 0.4250971100504631 1.0 ['nc|ENSG00000198933|A7MCY6-2|TBKBP1'] 56044 17364 LASSTRFPI True PC9_epitope_Rep5 990.5498304850599 990.54872993586 71.791 2 -1.5706048673012722 0.4250971100504631 1.0 ['ENST00000602321.5_1_16:67682228-67682996:+|nuORF'] 66953 14845 LSPDLSHTTL True PC9_epitope_Rep1 1082.56078909158 1082.5596899358602 61.92 2 -1.5706674426208278 0.4250971100504631 1.0 ['ENSG00000198734|ENST00000367797|F5'] 116475 15817 TTLTSRRTTRI True NCI_RA007_Epitope_Rep1 1304.75244645508 1304.7513499358602 65.623 2 -1.5706807749871181 0.4250971100504631 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 48588 26414 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 109.82 3 -1.5707094385681366 0.4250971100504631 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 12638 9652 DLCMKRLL True PC9_epitope_Rep1 990.53544337422 990.53434993586 41.982 2 -1.5707289039100383 0.4250971100504631 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31', 'ENST00000504022.1_1_5:74434805-74464953:-|nuORF'] 128989 3076 VQLDPLCA True PC9_epitope_Rep5 857.4316894983299 857.43058993586 16.806 2 -1.5707702148108114 0.4250971100504631 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 54065 8146 KVIELQKI True NCI_RA007_Epitope_Rep5 969.6222671493298 969.6211699358599 38.017 2 -1.5709337164488395 0.4250971100504631 1.0 ['PPFIA1|p.E257K|1|0.28|ENSG00000131626|chr11:70326657-70326657|G/A|missense_variant'] 119536 12877 VASLTYKDKV True PC9_epitope_Rep6 1122.62847472858 1122.62683490379 61.052 3 -1.57095776527033 0.4250971100504631 1.0 ['nc|ENSG00000117586|P23510-2|TNFSF4', 'ENSG00000117586|ENST00000281834|TNFSF4'] 128964 12102 VQIQTHPVNQM True PC9_epitope_Rep4 1293.64995553249 1293.6488499358602 54.355 2 -1.5709898899172747 0.4250971100504631 1.0 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK'] 119979 7355 VDPSFLAA True NCI_RA007_Epitope_Rep5 818.4174193331799 818.41632993586 34.971 2 -1.5711996504456105 0.4251346949003884 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'HUWE1|p.P2977H|1|0.17|ENSG00000086758|chrX:53551432-53551432|G/T|missense_variant'] 128988 3004 VQLDPLCA True PC9_epitope_Rep5 857.4316894983299 857.43058993586 16.466 2 -1.5712218162701308 0.4251346949003884 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 15969 5115 EDQLPLDYAK True NCI_RA007_Epitope_Rep1 1190.5819184589798 1190.58082993586 23.98 2 -1.571226577308948 0.4251346949003884 1.0 ['nc|ENSG00000076604|Q9BUZ4-2|TRAF4', 'ENSG00000076604|ENST00000262395|TRAF4', 'ENST00000461195.5_1_17:27071094-27074974:+|nuORF', 'ENST00000394925.5_1_17:27071094-27074489:+|nuORF', 'TRAF4|p.L247Rfs*27|1|0.3|ENSG00000076604|chr17:28748626-28748629|TGGT/-|frameshift_variant'] 91720 23457 RKDERKTV True PC9_epitope_Rep2 1030.5883412520998 1030.5872499358602 95.698 2 -1.5712694540249879 0.4251346949003884 1.0 ['ENST00000520515.5_1_5:133541561-133657575:-|nuORF', 'ENST00000518409.1_1_5:133640182-133644414:-|nuORF', 'ENST00000520693.5_1_5:133622066-133644414:-|nuORF', 'nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 95748 13387 RYHRHRHIEWA True H1975_Epitope_Rep1 1559.79704566207 1559.79594993586 56.603 2 -1.571344439171623 0.42513640039638695 1.0 ['TRIM49C|p.P128H|1|0.56|ENSG00000204449|chr11:90035594-90035594|C/A|missense_variant'] 27215 15803 FLNKSFHRDRR True NCI_RA007_Epitope_Rep1 1474.7905632993 1474.78946993586 65.567 2 -1.5713765717680448 0.42513640039638695 1.0 ['ENST00000215906.5_1_22:26829359-26829413:+|nuORF'] 126094 24672 VLENLLVLA True PC9_epitope_Rep4 982.6062827320198 982.60518993586 103.39 2 -1.571506539857347 0.4251381058146819 1.0 ['ENSG00000125910|ENST00000246115|S1PR4'] 66436 8683 LSGPQSRALQ True PC9_epitope_Rep3 1055.5723568347898 1055.5712499358601 38.348 2 -1.5715344879281021 0.4251381058146819 1.0 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP'] 78946 23074 PAGVVRER True PC9_epitope_Rep3 882.5035489989799 882.5030049679301 94.023 1 -1.5715876450282926 0.42515604355551506 1.0 ['ENST00000395595.7_1_22:51221660-51222060:-|nuORF'] 123997 5912 VGSEEKKI True PC9_epitope_Rep4 888.4916469025999 888.49054993586 29.648 2 -1.5716051482972728 0.42515774846807447 1.0 ['CNTN3|p.D43E|1|0.29|ENSG00000113805|chr3:74499712-74499712|A/T|missense_variant'] 15064 25127 DYRLLPKL True H1975_Epitope_Rep2 1016.6018660579199 1016.60076993586 103.24 2 -1.5716288220360883 0.42515774846807447 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A'] 4575 22512 AKPGGFGMG True PC9_epitope_Rep6 820.3901590395199 820.38906993586 99.597 2 -1.5717252674313298 0.42516115806018084 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 19903 10485 ELTRWLQEFTR True NCI_RA007_Epitope_Rep1 1477.7677621660496 1477.7666699358601 44.767 2 -1.5717318582871693 0.42516115806018084 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 91201 26619 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 111.16 1 -1.571790103890805 0.42516115806018084 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 118885 10809 VADATAIKQHV True H1975_Epitope_Rep3 1151.62987171091 1151.6287699358602 46.656 2 -1.5717990537229327 0.42516115806018084 1.0 ['ENSG00000172421|ENST00000305286|EFCAB3', 'nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 17888 3194 EHYKHHWFAEK True NCI_RA007_Epitope_Rep1 1510.7105816431 1510.7089349037901 16.316 3 -1.5720176059734339 0.42518904883381925 1.0 ['BTG1|p.P58A|1|0.17|ENSG00000133639|chr12:92144424-92144424|G/C|missense_variant'] 9006 11688 AVGQQKEL True PC9_epitope_Rep1 871.4763311916298 871.4752299358599 49.834 2 -1.5721502245714416 0.42518904883381925 1.0 ['ENSG00000006062|ENST00000344686|MAP3K14', 'MAP3K14|p.P23S|1|0.32|ENSG00000006062|chr17:45290679-45290679|G/A|missense_variant'] 25720 5363 FESKVSASE True NCI_RA007_Epitope_Rep4 982.46074069714 982.4596499358599 27.196 2 -1.5721670268967762 0.42518904883381925 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 126932 18484 VLRFTMRIV True PC9_epitope_Rep1 1133.6743198055299 1133.67268490379 75.889 3 -1.5721867016281816 0.42518904883381925 1.0 ['ENST00000221859.8_1_19:36605990-36606173:-|nuORF'] 8982 24001 AVGKVRDVRII True PC9_epitope_Rep1 1224.7666399672398 1224.7660749679299 97.128 1 -1.5722261055872584 0.42518904883381925 1.0 ['nc|ENSG00000100461|Q86U06-3|RBM23', 'ENST00000557667.5_1_14:23373372-23380602:-|nuORF', 'nc|ENSG00000100461|Q86U06-4|RBM23', 'nc|ENSG00000100461|Q86U06-2|RBM23', 'ENSG00000100461|ENST00000359890|RBM23', 'ENST00000556186.5_1_14:23373460-23374730:-|nuORF', 'nc|ENSG00000100461|Q86U06-5|RBM23'] 103254 24777 SPLHPALA True H1975_Epitope_Rep2 804.4493881678 804.4488349679301 101.87 1 -1.5722278106785417 0.42518904883381925 1.0 ['nc|ENSG00000198715|Q8WWB7-2|GLMP', 'ENSG00000198715|ENST00000362007|GLMP'] 40557 16330 HRFWYNYRQRK True NCI_RA007_Epitope_Rep1 1652.84366150132 1652.8425699358602 67.632 2 -1.572337812154856 0.42522491743537183 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 129033 23370 VQMWLLLY True H1975_Epitope_Rep2 1064.5728744287599 1064.5717699358602 96.358 2 -1.572378700963386 0.42522491743537183 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 14985 7888 DYHFWEEFHSK True H1975_Epitope_Rep1 1523.6469783270302 1523.6458899358602 35.293 2 -1.5725479232776103 0.42524966123504027 1.0 ['UGT2A3|p.Y234H|1|0.28|ENSG00000135220|chr4:68951061-68951061|A/G|missense_variant'] 128404 7220 VPRPGPAP True PC9_epitope_Rep2 789.4497225209699 789.44862993586 33.16 2 -1.572557236980882 0.42524966123504027 1.0 ['ENSG00000188032|ENST00000548523|C19orf67'] 75477 16894 NKKAAPRA True H1975_Epitope_Rep1 854.5086343794198 854.50752993586 70.394 2 -1.5725877516542537 0.42524966123504027 1.0 ['ENST00000568570.1_1_16:31993258-32005419:+|nuORF', 'nc|ENSG00000275832|Q9P227-2|ARHGAP23', 'ENSG00000275832|ENST00000622683|ARHGAP23'] 85053 11217 QEIKIQQPSKH True NCI_RA007_Epitope_Rep2 1334.73064838134 1334.7295499358602 48.217 2 -1.5727099202964034 0.42524966123504027 1.0 ['ENST00000378150.1_1_10:15177331-15210611:-|nuORF'] 56987 6219 LDREQTDRYEF True H1975_Epitope_Rep1 1470.6739213508597 1470.6728299358601 28.989 2 -1.5727194906887934 0.42524966123504027 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 6514 12694 APTERATLP True PC9_epitope_Rep1 954.5134449763399 954.51234993586 53.699 2 -1.5727410718738704 0.42524966123504027 1.0 ['ENST00000528856.5_1_11:34073295-34118749:+|nuORF', 'ENST00000526477.5_1_11:34073295-34074390:+|nuORF'] 68588 12956 LTHHQKIHT True PC9_epitope_Rep1 1113.60432566941 1113.60322993586 54.708 2 -1.5727513222388398 0.42524966123504027 1.0 ['ENSG00000186017|ENST00000452939|ZNF566', 'nc|ENSG00000186017|Q969W8-2|ZNF566'] 121785 7637 VFPAPPAG True NCI_RA007_Epitope_Rep2 754.4013753462199 754.40026993586 34.33 2 -1.5727896595095183 0.42524966123504027 1.0 ['ENSG00000212123|ENST00000419421|PRR22'] 61751 9178 LLAFLLCP True NCI_RA007_Epitope_Rep2 888.51429692348 888.5131899358599 40.308 2 -1.5728540857889548 0.42524966123504027 1.0 ['ENST00000335793.3_1_17:71280809-71281388:-|nuORF'] 73432 21137 MVAACLLLFLE True NCI_RA007_Epitope_Rep5 1221.6501387732899 1221.6484949037902 88.325 3 -1.5728896613067571 0.42526615428408765 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 122655 18488 VGGAYVGP True PC9_epitope_Rep1 718.3649898374999 718.36444496793 75.905 1 -1.5729658373346782 0.42526615428408765 1.0 ['ENSG00000189221|ENST00000338702|MAOA'] 84728 2819 QDRLLIPRWR True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 14.801 3 -1.5730052251641244 0.42526615428408765 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 93873 23900 RREPLLNHL True PC9_epitope_Rep5 1146.6621748987 1146.66052490379 96.911 3 -1.5731532758854148 0.42526615428408765 1.0 ['DEPDC7|p.S312R|1|0.42|ENSG00000121690|chr11:33031531-33031531|T/A|missense_variant'] 3043 3161 AFRKKKKLV True PC9_epitope_Rep6 1116.74953335112 1116.74842993586 18.108 2 -1.5731856275464626 0.42526615428408765 1.0 ['ENST00000601728.1_1_19:23309373-23309649:-|nuORF'] 53503 20265 KRKKKKKFCY True NCI_RA007_Epitope_Rep5 1355.8223810215497 1355.82073490379 84.891 3 -1.5732111878424113 0.42526615428408765 1.0 ['nc|ENSG00000168594|Q9UKF5-2|ADAM29', 'nc|ENSG00000168594|Q9UKF5-3|ADAM29', 'ENSG00000168594|ENST00000359240|ADAM29'] 58284 11849 LELTAC[Carbamidomethyl]EPL True PC9_epitope_Rep1 1044.51614767771 1044.5150499358601 50.442 2 -1.573287218697249 0.42528408443968757 1.0 ['ENST00000343534.9_1_1:112020844-112021090:+|nuORF'] 128344 14595 VPQHLPEDLTE True PC9_epitope_Rep6 1276.6299312805597 1276.62829490379 68.037 3 -1.573503639954654 0.4253264866957383 1.0 ['ENSG00000143157|ENST00000367876|POGK'] 83330 5270 PTEDNDLSR True NCI_RA007_Epitope_Rep3 1045.46761698273 1045.4665099358601 27.735 2 -1.573547835426987 0.4253264866957383 1.0 ['ENSG00000083093|ENST00000261584|PALB2', 'PALB2|p.M875Cfs*14|1|0.11|ENSG00000083093|chr16:23626362-23626362|G/-|frameshift_variant'] 415 16937 AALIIATHVL True PC9_epitope_Rep5 1020.6331661862001 1020.63206993586 70.164 2 -1.5736471134639307 0.4253264866957383 1.0 ['FTSJ1|p.N141I|1|0.32|ENSG00000068438|chrX:48481296-48481296|A/T|missense_variant'] 135310 1724 WFYDMKKVW True H1975_Epitope_Rep1 1301.6267009067699 1301.62504490379 8.9421 3 -1.573741309085719 0.4253449296480124 1.0 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000559020.1_1_1:150940136-150940936:-|nuORF'] 52942 18453 KPGPLRRAH True NCI_RA007_Epitope_Rep1 1030.6148307834599 1030.6137299358602 75.918 2 -1.573787148608305 0.4253449296480124 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 42025 14235 IDHCAPLLFTF True H1975_Epitope_Rep1 1275.63218021003 1275.63108993586 59.935 2 -1.57386627224163 0.4253449296480124 1.0 ['nc|ENSG00000244694|Q6ZW05|PTCHD4', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 122820 22225 VGGSCTRQHL True PC9_epitope_Rep3 1056.51346205968 1056.51236993586 90.773 2 -1.5739072242346552 0.4253449296480124 1.0 ['ENST00000511876.5_1_5:88185284-88199801:+|nuORF'] 89750 23456 RAFQGPQGFAV True NCI_RA007_Epitope_Rep4 1176.60399131624 1176.60235490379 101.8 3 -1.5739674618039725 0.4253449296480124 1.0 ['SUN2|p.W602R|1|0.25|ENSG00000100242|chr22:38738730-38738730|A/T|missense_variant'] 121193 6681 VESLTRTL True NCI_RA007_Epitope_Rep5 917.51819600361 917.51708993586 32.366 2 -1.5739813419609527 0.4253449296480124 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'COL14A1|p.P1731Cfs*40|1|0.08|ENSG00000187955|chr8:120369363-120369364|-/CT|frameshift_variant', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'COL14A1|p.R971Sfs*29|1|0.42|ENSG00000187955|chr8:120262910-120262910|G/-|frameshift_variant', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 122165 15001 VGAGTSGG True NCI_RA007_Epitope_Rep5 604.28165413636 604.2811049679301 64.369 1 -1.5739814622016743 0.4253449296480124 1.0 ['ENSG00000259330|ENST00000638170|INAFM2'] 91452 23401 RHQILLLA True H1975_Epitope_Rep3 962.6025347642599 962.60142993586 97.677 2 -1.5741276639853827 0.4253449296480124 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 68225 8441 LTEAEKWP True H1975_Epitope_Rep3 972.4916469025999 972.49054993586 37.454 2 -1.5741296336499482 0.4253449296480124 1.0 ['ENSG00000184895|ENST00000383070|SRY'] 123741 16203 VGRGRGLP True NCI_RA007_Epitope_Rep5 810.4824196315799 810.48187496793 69.068 1 -1.5741361289670202 0.4253449296480124 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.A690Hfs*28|1|0.39|ENSG00000188177|chr2:112325177-112325177|G/-|frameshift_variant', 'ENST00000476511.1_1_2:113067635-113069532:+|nuORF', 'ENST00000592618.5_1_19:1010351-1011343:-|nuORF'] 8004 5744 ATDKIKFPW True NCI_RA007_Epitope_Rep4 1104.59678067748 1104.59568993586 28.712 2 -1.5741900613447788 0.4253449296480124 1.0 ['ENST00000399196.1_1_6:30781990-30782203:-|nuORF'] 137067 16629 YAPEPGAA True H1975_Epitope_Rep1 774.3548190766198 774.3542749679301 69.343 1 -1.574199671370218 0.4253449296480124 1.0 ['ENST00000290913.7_2_3:126679085-126679208:+|nuORF'] 7625 14476 ASGGKDKC True PC9_epitope_Rep2 764.34868815036 764.34758993586 60.952 2 -1.5743013307693379 0.4253449296480124 1.0 ['ENSG00000073536|ENST00000442241|NLE1', 'nc|ENSG00000073536|Q9NVX2-2|NLE1'] 120887 17327 VENGQSIL True PC9_epitope_Rep5 858.4446967101799 858.44358993586 71.647 2 -1.5743344530873398 0.4253449296480124 1.0 ['KIRREL3|p.V226L|1|0.09|ENSG00000149571|chr11:126463223-126463223|C/G|missense_variant'] 104599 18714 SQRQIRKSR True NCI_RA007_Epitope_Rep5 1157.67413656473 1157.67302993586 78.804 2 -1.5743395009962775 0.4253449296480124 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 56009 16721 LASLLDIL True PC9_epitope_Rep1 856.52696978216 856.52586993586 69.146 2 -1.5744231094502952 0.4253679525560324 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 19553 16849 ELQAYNRRLLH True PC9_epitope_Rep1 1411.7684308723901 1411.76732993586 69.634 2 -1.5744363436291167 0.4253679525560324 1.0 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000552099.5_1_12:49165333-49167571:-|nuORF', 'ENST00000547260.5_1_12:49165333-49167887:-|nuORF', 'ENSG00000173175|ENST00000462833|ADCY5', 'nc|ENSG00000173175|O95622-2|ADCY5'] 104588 18460 SQRIQRPGR True NCI_RA007_Epitope_Rep5 1096.62137271588 1096.62026993586 77.833 2 -1.5745558333302405 0.4253679525560324 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 100978 10062 SLFRLQNQEIP True H1975_Epitope_Rep3 1343.7197493444696 1343.7186499358602 43.741 2 -1.5745809944150708 0.4253679525560324 1.0 ['ENSG00000283434|ENST00000637986|CSNKA2IP'] 53567 24602 KRQYHVQF True NCI_RA007_Epitope_Rep1 1104.58286194884 1104.5817699358602 101.9 2 -1.574602850894815 0.4253679525560324 1.0 ['ENST00000312173.5_1_11:46164605-46165142:+|nuORF'] 122349 15419 VGDFARDL True PC9_epitope_Rep5 891.4450310633499 891.44392993586 64.319 2 -1.57462817478448 0.4253679525560324 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 113274 6763 TLRHSEAT True PC9_epitope_Rep2 913.46174375665 913.46064993586 31.421 2 -1.5746475328363772 0.4253679525560324 1.0 ['ENSG00000149403|ENST00000527524|GRIK4'] 3114 24567 AGAHALYL True PC9_epitope_Rep5 814.4337381036601 814.43264993586 99.611 2 -1.574825949129149 0.4253778910945183 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 22488 22766 ETFRPKRGAA True H1975_Epitope_Rep3 1131.6148903531098 1131.61324490379 95.127 3 -1.574875797269708 0.4253778910945183 1.0 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 48620 3219 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 17.02 3 -1.5748798692500752 0.4253778910945183 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 91728 6343 RKEDNDEI True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 29.797 2 -1.5748819053030703 0.4253778910945183 1.0 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 91198 26395 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 110.12 1 -1.5749192276848742 0.4253778910945183 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 64247 10769 LPHFESLGKQ True PC9_epitope_Rep5 1154.6084079903399 1154.60730993586 46.415 2 -1.5750940344710238 0.4253958136517295 1.0 ['nc|ENSG00000077254|Q8TEY7|USP33', 'ENST00000528150.1_1_1:78206598-78225465:-|nuORF', 'nc|ENSG00000077254|Q8TEY7-3|USP33'] 36036 7795 GTYWVRYIH True PC9_epitope_Rep4 1193.5981776598098 1193.59654490379 37.383 3 -1.5752435122264563 0.4254023537981743 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'ENST00000567869.1_1_15:28436080-28447805:-|nuORF'] 66524 9965 LSHPPTSQSP True PC9_epitope_Rep2 1049.51417325233 1049.5130699358601 43.661 2 -1.5752845204881003 0.42541543364443435 1.0 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 11590 10436 DGEEVLIEW True H1975_Epitope_Rep3 1088.5026055091198 1088.5015099358602 45.201 2 -1.575372388485844 0.42541543364443435 1.0 ['ENSG00000182489|ENST00000372956|XKRX'] 58822 20810 LESQHLWYHRL True PC9_epitope_Rep1 1480.75753183552 1480.75642993586 84.873 2 -1.5753792138649156 0.4254171314106212 1.0 ['ENSG00000053328|ENST00000338882|METTL24'] 19495 9142 ELPFDRVV True PC9_epitope_Rep1 973.5232813840499 973.52218993586 40.015 2 -1.5754057699512536 0.4254171314106212 1.0 ['nc|ENSG00000073150|Q96RD6-1|PANX2', 'ENSG00000073150|ENST00000395842|PANX2'] 18472 4450 EKDYCWEYFL True NCI_RA007_Epitope_Rep2 1394.5852895872597 1394.5841899358602 21.943 2 -1.5755171152637366 0.4254236709422624 1.0 ['DHX36|p.R854Efs*4|1|0.17|ENSG00000174953|chr3:154280586-154280586|T/-|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 76649 21209 NQSDHTST True H1975_Epitope_Rep2 888.3573382577601 888.35624993586 87.776 2 -1.5756844890523405 0.42544982758032024 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 86460 5703 QKQRIYDITNV True NCI_RA007_Epitope_Rep1 1376.7412130650398 1376.7401099358601 26.242 2 -1.575773818633221 0.42544982758032024 1.0 ['E2F1|p.R165Q|1|0.43|ENSG00000101412|chr20:33679833-33679833|C/T|missense_variant'] 82901 15742 PSAGDVEK True NCI_RA007_Epitope_Rep1 801.38684748089 801.3862949679301 65.328 1 -1.5758116360577599 0.42544982758032024 1.0 ['ENSG00000025772|ENST00000372813|TOMM34'] 26737 6509 FKATNDYEHC[Carbamidomethyl]L True H1975_Epitope_Rep1 1396.6081505695897 1396.60704993586 30.097 2 -1.5758188705621177 0.42544982758032024 1.0 ['ENSG00000164363|ENST00000324642|SLC6A18'] 58175 21953 LEKSVPLAVL True PC9_epitope_Rep1 1067.65904658087 1067.65847496793 89.261 1 -1.5758710140558836 0.42545636636773343 1.0 ['ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 49362 9054 KESQVDELNIW True H1975_Epitope_Rep1 1359.6670450652698 1359.66594993586 39.735 2 -1.5759786837575902 0.4254808239444634 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 15857 14572 EDFNLIVNW True H1975_Epitope_Rep3 1148.55022440788 1148.54912993586 61.418 2 -1.5759821893533148 0.4254808239444634 1.0 ['ZSWIM2|p.T585A|1|0.08|ENSG00000163012|chr2:186828133-186828133|T/C|missense_variant', 'ZSWIM2|p.E623Sfs*4|1|0.25|ENSG00000163012|chr2:186828019-186828019|C/-|frameshift_variant', 'ENSG00000163012|ENST00000295131|ZSWIM2'] 70750 14375 LWWRNWFWVHF True H1975_Epitope_Rep1 1675.8200725224299 1675.8189699358602 60.486 2 -1.576064667081519 0.42551666059723237 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 22558 10224 ETIVKSYEEAG True H1975_Epitope_Rep1 1224.58739776224 1224.58630993586 44.269 2 -1.576072740360235 0.42551666059723237 1.0 ['ENSG00000169989|ENST00000304337|TIGD4'] 80698 12454 PGYALHDPS True PC9_epitope_Rep4 955.4399456829101 955.43884993586 55.712 2 -1.5762411237447478 0.42555733843160015 1.0 ['nc|ENSG00000177989|A8MYP8-2|CIMAP1B'] 15873 15750 EDHELIYC True NCI_RA007_Epitope_Rep5 1020.42224701344 1020.42114993586 67.299 2 -1.5762989489096562 0.42556387554908165 1.0 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 106308 6001 STFQVFQE True PC9_epitope_Rep4 984.4552613938798 984.45416993586 30.051 2 -1.5763791367713815 0.42557864311886934 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 18803 14481 ELDHLNFI True PC9_epitope_Rep5 999.50254593947 999.50144993586 60.702 2 -1.5764097936215233 0.42557864311886934 1.0 ['ENSG00000007314|ENST00000435607|SCN4A'] 79924 9701 PERGEFLAP True NCI_RA007_Epitope_Rep2 1014.5134449763398 1014.51234993586 42.354 2 -1.576464928051396 0.42557864311886934 1.0 ['LMO7-ITGBL1|1|fusion', 'nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7', 'ENSG00000136153|ENST00000377534|LMO7', 'ENST00000563635.5_1_13:76195947-76378681:+|nuORF'] 132791 25366 VVKEKLAI True NCI_RA007_Epitope_Rep5 898.5851533646198 898.5846049679301 105.1 1 -1.576468445848153 0.42557864311886934 1.0 ['nc|ENSG00000160058|Q9NW68-7|BSDC1', 'nc|ENSG00000160058|Q9NW68-3|BSDC1'] 55840 6197 LAPPASTK True H1975_Epitope_Rep3 783.44905381463 783.44794993586 28.85 2 -1.5765686543651163 0.4255934093443481 1.0 ['ENST00000400068.7_2_20:1918826-1919048:+|nuORF'] 56130 10742 LAVGAPSGY True H1975_Epitope_Rep1 833.42831837005 833.4277649679301 46.282 1 -1.5765723574311086 0.4255934093443481 1.0 ['nc|ENSG00000204053|P12525|MYCLP1'] 70258 18487 LVRKARSHIG True NCI_RA007_Epitope_Rep4 1135.6938093801498 1135.6927099358602 80.016 2 -1.5765778039415987 0.4255934093443481 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 90729 18639 REREREQRWRQ True NCI_RA007_Epitope_Rep2 1627.8403670260298 1627.83926993586 77.301 2 -1.5766131081066443 0.4255934093443481 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 134123 19683 VYLDDLTDMDP True PC9_epitope_Rep4 1295.5591344090699 1295.55802993586 83.831 2 -1.5767063425181622 0.4256113241468771 1.0 ['nc|ENSG00000134324|Q14693-6|LPIN1', 'nc|ENSG00000134324|Q14693|LPIN1', 'nc|ENSG00000134324|Q14693-2|LPIN1', 'nc|ENSG00000134324|Q14693-4|LPIN1', 'ENSG00000134324|ENST00000674199|LPIN1', 'nc|ENSG00000134324|Q14693-5|LPIN1', 'nc|ENSG00000134324|Q14693-7|LPIN1'] 135055 13825 WDYRERRKFFP True NCI_RA007_Epitope_Rep2 1598.8106300375393 1598.8095299358602 58.425 2 -1.5767895363593971 0.42561785990624007 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 126354 10443 VLISRDEL True PC9_epitope_Rep5 943.53384606775 943.53274993586 45.156 2 -1.5769039718690616 0.4256195526022347 1.0 ['nc|ENSG00000164393|Q8IZF7-2|ADGRF2P', 'nc|ENSG00000164393|Q8IZF7|ADGRF2P'] 70259 18506 LVRKARSHIG True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 78.011 2 -1.576931817125851 0.4256195526022347 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 61236 16522 LIMQEMLM True NCI_RA007_Epitope_Rep3 1007.4853819473099 1007.48428993586 72.786 2 -1.5769705387928734 0.4256212452211906 1.0 ['ENST00000397641.7_1_22:31352760-31354648:-|nuORF'] 120718 19224 VEKKLARPV True PC9_epitope_Rep4 1038.6549642599398 1038.65386993586 82.046 2 -1.5769860758389767 0.4256212452211906 1.0 ['TDRD6|p.R955K|1|0.22|ENSG00000180113|chr6:46690992-46690992|G/A|missense_variant'] 37020 16507 GVPASTCL True NCI_RA007_Epitope_Rep4 746.36327558534 746.36272496793 71.558 1 -1.577075746919325 0.4256277804958527 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3'] 19524 15281 ELPPALGPC True NCI_RA007_Epitope_Rep3 895.44733956247 895.44679496793 67.655 1 -1.5770970013736065 0.4256343156218 1.0 ['ENST00000553365.5_1_14:20835061-20835109:-|nuORF'] 22510 6622 ETGNLFHIDLG True H1975_Epitope_Rep1 1214.59315184902 1214.5920499358601 30.527 2 -1.5771433185778154 0.42563600782778865 1.0 ['PIK3CG|p.F965L|1|0.24|ENSG00000105851|chr7:106886157-106886157|C/A|missense_variant'] 61686 24855 LKVLFLDHPKK True NCI_RA007_Epitope_Rep4 1336.8230922142 1336.82198993586 108.1 2 -1.577152771642014 0.42563600782778865 1.0 ['nc|ENSG00000148300|Q9GZR2-2|REXO4', 'ENSG00000148300|ENST00000371942|REXO4'] 120124 9953 VEAEAVNRA True H1975_Epitope_Rep3 957.4879585044899 957.48686993586 43.318 2 -1.577240249505607 0.4256652975777366 1.0 ['nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2', 'ENST00000521983.1_1_8:26484742-26500445:+|nuORF'] 130635 20054 VSSYPMHPLL True PC9_epitope_Rep2 1142.57941636118 1142.57830993586 82.543 2 -1.5772889156210277 0.42567836623243643 1.0 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-3|ILDR1', 'ENST00000460554.1_1_3:121712781-121740924:-|nuORF', 'nc|ENSG00000145103|Q86SU0-4|ILDR1', 'nc|ENSG00000145103|Q86SU0-5|ILDR1'] 83165 19469 PSSLLSRHFSW True NCI_RA007_Epitope_Rep5 1315.6673198487902 1315.66567490379 81.776 3 -1.5773302766383255 0.42567836623243643 1.0 ['ENST00000393067.7_1_11:111223088-111223172:-|nuORF'] 66412 13353 LSGLPDTVFEI True PC9_epitope_Rep2 1189.6230549949698 1189.6219499358601 56.635 2 -1.57740120716848 0.4256914342924104 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 44377 10245 ILESKRLNL True NCI_RA007_Epitope_Rep3 1084.6604435632 1084.65934993586 47.376 2 -1.5774307107965246 0.4256914342924104 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 107261 4805 SVLAELRR True NCI_RA007_Epitope_Rep4 942.5610638751 942.55996993586 24.918 2 -1.5776826775145893 0.4257320985687956 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 3836 8216 AGVPPSKSKK True PC9_epitope_Rep6 997.59202965021 997.59092993586 41.178 2 -1.5777508233380193 0.425738631838815 1.0 ['ENSG00000055130|ENST00000325222|CUL1'] 9389 3952 AVSRGPATP True NCI_RA007_Epitope_Rep4 854.46101548066 854.45990993586 21.437 2 -1.5778687222300762 0.42574032149804897 1.0 ['ENST00000586624.1_2_19:38709694-38718681:-|nuORF'] 67757 9705 LSYLDSHLH True PC9_epitope_Rep3 1083.5349086969102 1083.53380993586 42.285 2 -1.5778904317947253 0.42574032149804897 1.0 ['nc|ENSG00000204701|O76001|OR2J3', 'ENSG00000204701|ENST00000641151|OR2J3', 'OR2J2|p.V52L|1|0.18|ENSG00000204700|chr6:29173789-29173789|G/T|missense_variant', 'ENSG00000204702|ENST00000641659|OR2J1'] 80885 16477 PHVISHGF True NCI_RA007_Epitope_Rep5 892.4555361774 892.45442993586 70.138 2 -1.578004599048603 0.4257567656728133 1.0 ['ENST00000469720.1_1_3:55545064-55681076:-|nuORF', 'ENST00000484530.5_1_3:55545064-55640922:-|nuORF'] 140968 4341 YSFRQSFSLY True NCI_RA007_Epitope_Rep2 1296.6138872936 1296.61278993586 21.522 2 -1.5780411026637045 0.4257567656728133 1.0 ['nc|ENSG00000144711|Q6DN90-2|IQSEC1', 'nc|ENSG00000144711|Q6DN90|IQSEC1', 'ENSG00000144711|ENST00000613206|IQSEC1'] 127629 10529 VPAEEPANE True PC9_epitope_Rep1 954.4294405688598 954.42834993586 45.39 2 -1.5780477636788002 0.4257567656728133 1.0 ['ENSG00000105223|ENST00000409735|PLD3', 'ENST00000493006.1_1_19:40872390-40872823:+|nuORF', 'ENST00000485448.1_1_19:40872390-40872810:+|nuORF'] 102019 14409 SLQRHLLIH True PC9_epitope_Rep4 1115.65636124227 1115.6552699358601 63.334 2 -1.5780961668259517 0.4257567656728133 1.0 ['nc|ENSG00000138738|Q9NQX1-4|PRDM5', 'nc|ENSG00000138738|Q9NQX1-2|PRDM5', 'ENSG00000138738|ENST00000264808|PRDM5', 'ENST00000505484.5_1_4:121652936-121737791:-|nuORF'] 127765 16826 VPCYVHIL True NCI_RA007_Epitope_Rep5 942.4997094885 942.49860993586 71.47 2 -1.5781927702690908 0.4257567656728133 1.0 ['ENSG00000187747|ENST00000345043|OR52B6', 'OR52B6|p.L296Q|1|0.39|ENSG00000187747|chr11:5581763-5581763|T/A|missense_variant'] 80034 17221 PFGHGLRPV True PC9_epitope_Rep1 978.5399345077 978.53882993586 71.059 2 -1.5781964980562024 0.4257567656728133 1.0 ['ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5'] 10645 4379 CPKLQLWEWRN True H1975_Epitope_Rep1 1471.7394392432298 1471.73779490379 21.847 3 -1.5784058950143562 0.42578773745876464 1.0 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 45042 6226 IPGTEDYRSK True NCI_RA007_Epitope_Rep2 1164.5775017848798 1164.57640993586 28.824 2 -1.5784523296834259 0.42578773745876464 1.0 ['ENSG00000145147|ENST00000504154|SLIT2'] 134944 15798 WAGDNQGL True NCI_RA007_Epitope_Rep3 859.3824308067899 859.38132993586 69.779 2 -1.5784612567328118 0.42578773745876464 1.0 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 41335 7807 HWEDERLE True PC9_epitope_Rep5 1112.4886867804798 1112.4875899358601 34.973 2 -1.578663733604825 0.4258073322489279 1.0 ['ENSG00000181555|ENST00000409792|SETD2', 'SETD2|p.D2100Tfs*4|1|0.18|ENSG00000181555|chr3:47057483-47057487|TATCA/-|frameshift_variant', 'SETD2|p.R2132Tfs*22|1|0.28|ENSG00000181555|chr3:47057390-47057391|-/T|frameshift_variant', 'SETD2|p.K1874Rfs*3|1|0.15|ENSG00000181555|chr3:47084161-47084161|G/-|frameshift_variant', 'SETD2|p.N1535Wfs*7|1|0.16|ENSG00000181555|chr3:47113987-47113988|TT/-|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'SETD2|p.T1652Yfs*14|1|0.31|ENSG00000181555|chr3:47101519-47101520|-/A|frameshift_variant', 'nc|ENSG00000181555|Q9BYW2-2|SETD2', 'SETD2|p.D1423Gfs*6|1|0.12|ENSG00000181555|chr3:47120368-47120369|-/C|frameshift_variant'] 43463 5068 IGGVVAVPMV True NCI_RA007_Epitope_Rep3 940.54157430048 940.54046993586 26.927 2 -1.5786758496835163 0.4258073322489279 1.0 ['nc|ENSG00000165949|P40305-1|IFI27'] 125414 16018 VISVLTTP True PC9_epitope_Rep3 828.49566965388 828.49456993586 66.761 2 -1.5786884895024673 0.4258073322489279 1.0 ['ENST00000433544.1_1_1:94219789-94240816:-|nuORF'] 8141 19879 ATELLIVVK True PC9_epitope_Rep4 984.6219327961599 984.62082993586 84.597 2 -1.5788013238481196 0.4258431439458568 1.0 ['ENST00000526878.5_1_11:460175-490579:+|nuORF', 'ENSG00000174915|ENST00000308020|PTDSS2'] 123613 21393 VGQGGGGK True PC9_epitope_Rep5 658.3398377188199 658.3392849679301 87.35 1 -1.5788447397910592 0.4258431439458568 1.0 ['ENST00000589017.5_1_17:66507964-66511234:+|nuORF'] 40905 10906 HSPLLQPGL True PC9_epitope_Rep4 960.53926580136 960.53816993586 49.717 2 -1.5790825139529452 0.42590654715865145 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 79350 19295 PARVLDWWG True PC9_epitope_Rep6 1098.5610638750998 1098.5599699358602 86.865 2 -1.5791409766518083 0.42591307710681664 1.0 ['ENST00000337304.2_1_22:39916672-39916864:+|nuORF'] 74608 23550 NGGMLRSS True H1975_Epitope_Rep3 820.3861362882401 820.38502993586 98.26 2 -1.5792747734791943 0.4259326660600546 1.0 ['ENST00000361229.8_1_X:101975660-101975984:+|nuORF'] 139488 20922 YLRQQILFYQR True PC9_epitope_Rep3 1526.83578215622 1526.83414490379 85.753 3 -1.5792909783204327 0.4259326660600546 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 22971 10678 EVERVRRSERY True H1975_Epitope_Rep1 1477.7749728048097 1477.7738699358601 46.033 2 -1.5793516220319626 0.4259326660600546 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 36586 10979 GVHPAPGF True PC9_epitope_Rep2 780.39187329168 780.39076993586 47.553 2 -1.5794475318039733 0.42594572461954916 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 32579 11395 GGGTCHRC True H1975_Epitope_Rep3 789.3010267652899 789.3004749679301 48.944 1 -1.5794518103459307 0.42594572461954916 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 56236 23430 LCLTVRFNLVI True PC9_epitope_Rep2 1289.75296404905 1289.75131490379 95.597 3 -1.5795200201601274 0.42594740912606344 1.0 ['ENST00000373840.8_1_9:123943305-123943461:-|nuORF'] 66963 12226 LSPDLSHTTL True PC9_epitope_Rep6 1082.56078909158 1082.5596899358602 58.401 2 -1.5796149595551765 0.42594740912606344 1.0 ['ENSG00000198734|ENST00000367797|F5'] 89985 22888 RDKKQIREPVD True PC9_epitope_Rep4 1382.76301113878 1382.7613649037899 96.258 3 -1.5796467263531755 0.425953938015354 1.0 ['ZNF148|p.N574Rfs*22|1|0.11|ENSG00000163848|chr3:125233000-125233007|AAGAATTT/-|frameshift_variant', 'ENST00000497929.1_1_3:124951187-125011317:-|nuORF', 'ENSG00000163848|ENST00000360647|ZNF148', 'ZNF148|p.I209Yfs*26|1|0.34|ENSG00000163848|chr3:125277768-125277768|T/-|frameshift_variant'] 53089 19670 KPQFEEKKKR True NCI_RA007_Epitope_Rep5 1316.7564692063597 1316.75587496793 82.573 1 -1.5796703752237728 0.42595730646316915 1.0 ['nc|ENSG00000173421|Q8IYA8-2|IHO1'] 83490 10867 PTQVWGVEW True H1975_Epitope_Rep2 1100.52909504048 1100.5279899358602 46.829 2 -1.5796987067247716 0.42595730646316915 1.0 ['ENST00000512660.1_1_5:176936187-176936779:-|nuORF', 'ENST00000502380.1_1_5:176936187-176937359:-|nuORF'] 74294 6979 NEKVRYIV True PC9_epitope_Rep4 1019.57637958607 1019.57528993586 34.088 2 -1.57974513500391 0.42595730646316915 1.0 ['ENST00000467199.5_1_7:2274501-2274588:-|nuORF'] 142219 4068 YWINKRRRYGM True NCI_RA007_Epitope_Rep2 1541.80377083529 1541.80213490379 20.461 3 -1.5797480601989242 0.42595730646316915 1.0 ['ENSG00000186118|ENST00000334122|TEX38'] 93662 18963 RQRRATPPA True PC9_epitope_Rep5 1051.5999089953098 1051.5988099358601 77.965 2 -1.5798931091840616 0.4259964746687894 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 126646 11971 VLNQTTRL True PC9_epitope_Rep1 943.5450794577899 943.5439899358599 50.909 2 -1.5800273181479445 0.4259964746687894 1.0 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 37177 15642 GVQQQRPP True PC9_epitope_Rep3 908.4828135543999 908.48170993586 65.314 2 -1.580102082438351 0.4259964746687894 1.0 ['ENST00000582620.5_1_18:72167208-72179735:+|nuORF', 'ENST00000584581.5_1_18:72178181-72179738:+|nuORF'] 16745 4403 EESRPRARA True NCI_RA007_Epitope_Rep2 1070.5581037529798 1070.5570099358602 21.763 2 -1.5801347171998532 0.4259964746687894 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'ENST00000497613.2_1_8:145658938-145666334:-|nuORF'] 20926 1427 EQMYAKYVKM True PC9_epitope_Rep1 1289.6148158937299 1289.61316490379 7.8562 3 -1.580172579476985 0.4259964746687894 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SUCO|p.N919Ffs*5|1|0.05|ENSG00000094975|chr1:172589853-172589854|-/TGTTCTTCTTCTT|frameshift_variant'] 12491 6470 DKEHIYDEQPP True H1975_Epitope_Rep2 1369.6150094924099 1369.6139099358602 29.803 2 -1.5801837345249976 0.4259964746687894 1.0 ['nc|ENSG00000197822|Q16625-3|OCLN', 'ENSG00000197822|ENST00000396442|OCLN', 'nc|ENSG00000197822|Q16625-4|OCLN'] 82459 24139 PPPYHDAL True NCI_RA007_Epitope_Rep2 908.43921740692 908.43812993586 101.4 2 -1.580258241053328 0.42601437409024745 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 97040 5481 SCSLHYIHP True PC9_epitope_Rep2 1055.4858503295102 1055.48474993586 26.478 2 -1.580295282783026 0.4260209013270864 1.0 ['ENSG00000196353|ENST00000429747|CPNE4', 'nc|ENSG00000196353|Q96A23-2|CPNE4'] 105727 6033 SSFFNQKYKSE True H1975_Epitope_Rep3 1363.64083031743 1363.63972993586 28.22 2 -1.58040158044348 0.42602258383652303 1.0 ['ENST00000474889.5_1_3:62254795-62257092:+|nuORF'] 34406 22350 GPHDLDEF True H1975_Epitope_Rep3 928.39266113732 928.39156993586 93.45 2 -1.580404678240917 0.42602258383652303 1.0 ['CACNA1E|p.H1740D|1|0.13|ENSG00000198216|chr1:181776179-181776179|C/G|missense_variant'] 132811 16398 VVLATKTP True NCI_RA007_Epitope_Rep5 827.51165407119 827.51054993586 69.83 2 -1.5804665478955535 0.42604048214691836 1.0 ['ENSG00000090402|ENST00000264382|SI', 'SI|p.G318Vfs*10|1|0.64|ENSG00000090402|chr3:165062440-165062440|G/-|frameshift_variant'] 58925 14435 LETLETWVM[Oxidation]P True PC9_epitope_Rep2 1233.59512637541 1233.5940299358601 60.792 2 -1.5805366949991142 0.426058380050261 1.0 ['ENSG00000103489|ENST00000261381|XYLT1'] 19387 19053 ELLSYWQFV True NCI_RA007_Epitope_Rep1 1183.5913609438699 1183.59026993586 78.253 2 -1.580591948636429 0.4260714326325006 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'ENST00000474871.5_1_3:132405102-132413706:-|nuORF', 'nc|ENSG00000113971|Q7Z494-2|NPHP3', 'ENST00000471702.2_2_3:132363653-132416205:-|nuORF'] 117160 7370 TVLEDLESELD True PC9_epitope_Rep5 1261.59254271233 1261.59144993586 33.305 2 -1.5806051185970789 0.4260714326325006 1.0 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 46914 11407 ITNDKGHLSKE True H1975_Epitope_Rep1 1240.6411646706 1240.64006993586 48.856 2 -1.580798810967308 0.42609585536414807 1.0 ['ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 98810 11392 SGPGGGGK True H1975_Epitope_Rep3 615.29763855367 615.2970949679301 48.933 1 -1.580815350412817 0.42609585536414807 1.0 ['nc|ENSG00000065717|Q04725-3|TLE2', 'ENSG00000065717|ENST00000262953|TLE2', 'nc|ENSG00000065717|Q04725-2|TLE2'] 123367 16118 VGMFLLLL True PC9_epitope_Rep5 904.5455970517598 904.54504496793 66.989 1 -1.5808359673270092 0.42610238100652675 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 7640 22406 ASHLARTK True PC9_epitope_Rep4 882.50354899898 882.5030049679301 94.416 1 -1.5809286375754492 0.426143017953995 1.0 ['ENSG00000238227|ENST00000418388|TMEM250'] 102469 14089 SLVEFRNL True PC9_epitope_Rep1 976.5341804209199 976.53308993586 59.024 2 -1.5809496617585084 0.4261495429117206 1.0 ['nc|ENSG00000185585|Q68BL7-3|OLFML2A', 'nc|ENSG00000185585|Q68BL7-2|OLFML2A', 'ENSG00000185585|ENST00000373580|OLFML2A'] 29964 25997 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 107.6 3 -1.5811233878761533 0.42616110511056793 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 111367 22030 THRRVRLHRH True NCI_RA007_Epitope_Rep2 1366.79190071198 1366.7908099358601 91.383 2 -1.5811915183430272 0.42616110511056793 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 66413 13440 LSGLPDTVFEI True PC9_epitope_Rep2 1189.6230549949698 1189.6219499358601 56.977 2 -1.5812083802236048 0.42616110511056793 1.0 ['LRRC8C|p.G737Wfs*26|1|0.14|ENSG00000171488|chr1:89714776-89714777|-/T|frameshift_variant', 'ENSG00000171488|ENST00000370454|LRRC8C'] 133512 19869 VWLKKFSLGDF True NCI_RA007_Epitope_Rep5 1338.7336085034597 1338.7325099358602 83.339 2 -1.5812531563025347 0.42616110511056793 1.0 ['GUCY2F|p.G1004Wfs*34|1|0.4|ENSG00000101890|chrX:109385229-109385230|-/A|frameshift_variant', 'GUCY2F|p.P942Qfs*17|1|0.17|ENSG00000101890|chrX:109388620-109388620|G/-|frameshift_variant', 'ENSG00000101890|ENST00000218006|GUCY2F'] 72016 14668 METCCPCCCCP True NCI_RA007_Epitope_Rep4 1191.30195755903 1191.30031490379 63.829 3 -1.5813345168410093 0.42616110511056793 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 59369 16772 LFLESTNKI True PC9_epitope_Rep3 1063.59136094387 1063.59026993586 69.66 2 -1.581383471465163 0.42616110511056793 1.0 ['ENSG00000116954|ENST00000373001|RRAGC', 'ENSG00000025039|ENST00000369415|RRAGD'] 53205 9681 KQEITQNKSFF True NCI_RA007_Epitope_Rep2 1368.70376492716 1368.70266993586 42.275 2 -1.581415882434233 0.42616110511056793 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2'] 42102 16229 IDLLVSLQNQG True NCI_RA007_Epitope_Rep3 1198.65575210558 1198.65464993586 71.525 2 -1.5814779351468455 0.42616930807885584 1.0 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 7465 6704 ASATGVYLA True H1975_Epitope_Rep3 851.4388830537499 851.43778993586 30.741 2 -1.5815204341842708 0.42616930807885584 1.0 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 53121 19502 KPTKMLGTWVL True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.72587496793 81.9 1 -1.581526154989078 0.42616930807885584 1.0 ['ENST00000397269.7_1_10:5948371-5948467:+|nuORF'] 63081 20229 LLQNKRITYEK True NCI_RA007_Epitope_Rep5 1404.8088987020399 1404.80725490379 84.752 3 -1.581597838246929 0.4262213076547028 1.0 ['ENST00000337147.11_1_6:159187137-159187215:-|nuORF'] 138482 22537 YHRRVHTG True PC9_epitope_Rep3 1024.5314950823197 1024.53038993586 91.96 2 -1.5818468738217248 0.42624907633717957 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 50107 22515 KKKEKKKSGRV True H1975_Epitope_Rep3 1314.8459529171 1314.84430490379 94.108 3 -1.581901920139562 0.42624907633717957 1.0 ['ENST00000481407.5_1_7:92207439-92210911:-|nuORF'] 116152 7571 TSTLILPP True NCI_RA007_Epitope_Rep5 840.49566965388 840.49456993586 35.807 2 -1.581917521072545 0.42624907633717957 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 59497 14523 LFRGVFVHR True PC9_epitope_Rep6 1129.6508819390099 1129.64923490379 67.752 3 -1.5819216870434523 0.42624907633717957 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 108406 8429 SYLLKMQQKLQ True NCI_RA007_Epitope_Rep4 1378.7642570087398 1378.7626049037901 39.236 3 -1.5819658250581852 0.42624907633717957 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A', 'nc|ENSG00000154898|Q8IYA2|CCDC144CP'] 139310 25581 YLKKPGGG True PC9_epitope_Rep2 818.4650382319398 818.46448496793 104.08 1 -1.5819930797994117 0.42624907633717957 1.0 ['AGPAT1|p.G283V|1|0.24|ENSG00000204310|chr6:32169280-32169280|C/A|missense_variant', 'ENST00000490711.5_1_6:32137055-32144296:-|nuORF', 'ENSG00000204310|ENST00000375107|AGPAT1'] 121625 24172 VFHGKPEKVFH True PC9_epitope_Rep2 1323.7087907379498 1323.70714490379 98.503 3 -1.5822361614165177 0.4262637974741102 1.0 ['ENST00000535730.1_1_11:73662114-73670750:+|nuORF', 'DNAJB13|p.F223Sfs*11|1|0.21|ENSG00000187726|chr11:73968405-73968405|T/-|frameshift_variant', 'ENSG00000187726|ENST00000339764|DNAJB13'] 36210 2934 GVCMPVKR True NCI_RA007_Epitope_Rep1 888.4673638144 888.4662699358599 15.254 2 -1.5822785229942384 0.4262637974741102 1.0 ['ENST00000375859.3_1_9:91091428-91091536:+|nuORF'] 3629 17015 AGPHPRQPAF True PC9_epitope_Rep5 1076.55156182056 1076.55046993586 70.467 2 -1.5822982062974642 0.4262637974741102 1.0 ['nc|ENSG00000168061|A6NKF1-2|SAC3D1', 'ENST00000530213.5_1_11:64808530-64811777:+|nuORF', 'ENSG00000168061|ENST00000652489|SAC3D1', 'nc|ENSG00000168061|A6NKF1|SAC3D1'] 33925 9207 GLRKGAQE True PC9_epitope_Rep6 857.4719145175299 857.47080993586 45.553 2 -1.5822992315208724 0.4262637974741102 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4'] 2475 5140 AEQLRGFNA True PC9_epitope_Rep2 1004.5039429217999 1004.50284993586 25.15 2 -1.582338062188063 0.4262654738493367 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 49603 6507 KGAGGGGP True H1975_Epitope_Rep2 599.3027239341101 599.30217496793 29.945 1 -1.582407510591442 0.4262654738493367 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 19554 4603 ELQCHEAELQH True H1975_Epitope_Rep3 1335.58774919875 1335.5866499358601 22.828 2 -1.582498616341711 0.42627851727234495 1.0 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF', 'ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 120219 9494 VEARRHQRLQ True NCI_RA007_Epitope_Rep2 1291.7221493863099 1291.72104993586 41.542 2 -1.5825220432149667 0.42627851727234495 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 64117 8240 LPEGEHQYK True H1975_Epitope_Rep3 1099.5298233164701 1099.52927496793 36.678 1 -1.582552612086536 0.42628503876145224 1.0 ['nc|ENSG00000131791|O43741-2|PRKAB2', 'ENSG00000131791|ENST00000254101|PRKAB2', 'ENSG00000111725|ENST00000229328|PRKAB1'] 30410 20964 GAELVPLQL True PC9_epitope_Rep4 938.54368247546 938.54258993586 88.799 2 -1.582622732624312 0.4262915601023018 1.0 ['ENST00000517947.5_1_5:151151539-151166168:+|nuORF'] 30493 20973 GAGDLGGF True NCI_RA007_Epitope_Rep1 692.31295426464 692.3124049679301 85.827 1 -1.582662517296202 0.4263046023392478 1.0 ['ENST00000246672.3_1_17:38251239-38251841:-|nuORF'] 125383 16525 VIRQAPPVI True PC9_epitope_Rep4 991.6178504752298 991.61674993586 71.536 2 -1.5826718906301658 0.4263046023392478 1.0 ['MAGEL2|p.V991*|1|0.22|ENSG00000254585|chr15:23644773-23644773|G/-|frameshift_variant', 'ENSG00000254585|ENST00000650528|MAGEL2'] 84702 16130 QDLQRHWL True PC9_epitope_Rep5 1094.56212650426 1094.56102993586 67.034 2 -1.5827571415838637 0.4263062776344355 1.0 ['ENST00000462722.5_1_9:131597926-131600079:-|nuORF'] 19550 17689 ELQALRNDL True PC9_epitope_Rep3 1070.57202248162 1070.57092993586 73.237 2 -1.5827658680134522 0.4263062776344355 1.0 ['ENSG00000203952|ENST00000695460|CCDC160'] 32452 21008 GFYADPYLY True PC9_epitope_Rep6 1107.49131254943 1107.49020993586 93.632 2 -1.582945505862919 0.42632266863669943 1.0 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'KIAA1217|p.A1901Pfs*6|1|0.11|ENSG00000120549|chr10:24546193-24546193|G/-|frameshift_variant', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 34180 24071 GNFRKHLRMV True PC9_epitope_Rep2 1256.69242948116 1256.69132993586 98.091 2 -1.5830857166771408 0.42632266863669943 1.0 ['ENST00000371482.5_2_9:140348075-140349042:-|nuORF'] 59501 13455 LFRIRNSELHL True NCI_RA007_Epitope_Rep2 1396.79391734424 1396.79282993586 56.981 2 -1.5831019829768862 0.42632266863669943 1.0 64397 25499 LPLSLLKTA True PC9_epitope_Rep1 954.61136811246 954.61026993586 103.07 2 -1.5832374756132674 0.42632266863669943 1.0 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 34377 20857 GPGAGGHY True H1975_Epitope_Rep3 714.30853759054 714.3079849679301 87.115 1 -1.583257944458554 0.42632266863669943 1.0 ['ENST00000409262.7_1_2:74326608-74327766:+|nuORF'] 2948 19556 AFDKNNPSNK True PC9_epitope_Rep3 1133.5465360097699 1133.54542993586 80.457 2 -1.583259962539909 0.42632266863669943 1.0 ['ENSG00000154122|ENST00000284268|ANKH', 'ENST00000503939.5_1_5:14741448-14751330:-|nuORF', 'ENST00000515517.1_1_5:14741839-14746068:-|nuORF', 'nc|ENSG00000154122|Q9HCJ1-2|ANKH'] 131708 5300 VTNSYPRWL True NCI_RA007_Epitope_Rep4 1134.5821932425 1134.58054490379 26.94 3 -1.5832976896610576 0.42632918873457143 1.0 ['ENST00000529192.1_3_11:46638262-46638355:-|nuORF'] 122417 4537 VGDSLHNF True NCI_RA007_Epitope_Rep1 887.4137309350701 887.41262993586 21.749 2 -1.5833365251769451 0.42633086329954084 1.0 ['nc|ENSG00000148482|Q504Y0-5|SLC39A12', 'nc|ENSG00000148482|Q504Y0-3|SLC39A12', 'nc|ENSG00000148482|Q504Y0-4|SLC39A12', 'ENSG00000148482|ENST00000377369|SLC39A12'] 62761 25403 LLLQLNNQ True PC9_epitope_Rep3 954.54983048506 954.54872993586 103.14 2 -1.5834035400975126 0.42633086329954084 1.0 ['ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1'] 10709 5390 CRQARRTRS True PC9_epitope_Rep5 1132.5995917254797 1132.59848993586 25.745 2 -1.5834311506847103 0.42633253778838504 1.0 ['nc|ENSG00000047346|Q32MH5-2|ATOSA', 'ENSG00000047346|ENST00000619572|ATOSA', 'nc|ENSG00000047346|Q32MH5-3|ATOSA'] 61077 26129 LIHGTADD True PC9_epitope_Rep1 840.39774651776 840.39664993586 105.79 2 -1.5834417217690262 0.42633253778838504 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 103080 10078 SPGPKGIA True NCI_RA007_Epitope_Rep5 725.40718900265 725.4066449679301 45.401 1 -1.5835770741600377 0.42635562019908185 1.0 ['ENST00000480127.1_1_10:105815115-105815723:-|nuORF'] 65825 10191 LSDKTSRN True PC9_epitope_Rep1 919.47230844035 919.47120993586 44.078 2 -1.5835818319536332 0.42635562019908185 1.0 ['ENSG00000162695|ENST00000357650|SLC30A7'] 2759 3874 AETLLYTYCSI True NCI_RA007_Epitope_Rep4 1275.60569067867 1275.60458993586 21.11 2 -1.58358577924837 0.42635562019908185 1.0 ['GTF3C3|p.Q877E|1|0.09|ENSG00000119041|chr2:196764595-196764595|G/C|missense_variant'] 95526 19412 RWRLPLTCLLL True NCI_RA007_Epitope_Rep3 1382.82204666838 1382.8204049037902 84.71 3 -1.5836227480105372 0.42635562019908185 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 29580 24911 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 103.62 3 -1.583628875762418 0.42635562019908185 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 89476 9264 QYGEHFRIRQN True H1975_Epitope_Rep3 1446.71164427226 1446.70999490379 40.626 3 -1.5836464816504106 0.42635562019908185 1.0 ['ENSG00000124103|ENST00000371328|FAM209A'] 127182 5259 VLVIKARKLPP True PC9_epitope_Rep3 1232.8332629750798 1232.83216993586 25.309 2 -1.5837605864583024 0.42635562019908185 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 64539 13455 LPRRDFQRQVW True H1975_Epitope_Rep1 1499.8109643907098 1499.8098699358602 56.871 2 -1.5837800580460621 0.42635562019908185 1.0 ['ENSG00000177272|ENST00000369769|KCNA3', 'KCNA3|p.V409Sfs*32|1|0.4|ENSG00000177272|chr1:110673585-110673585|C/-|frameshift_variant'] 61079 26846 LIHGTADD True PC9_epitope_Rep1 840.39774651776 840.39664993586 109.24 2 -1.5837868942558087 0.42635562019908185 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 3856 12257 AGWAPGPG True NCI_RA007_Epitope_Rep2 711.3340240623899 711.3334749679301 52.277 1 -1.5837898033531408 0.42635562019908185 1.0 ['ENST00000436636.6_1_3:171177942-171178068:-|nuORF'] 20838 17879 EQISPQDIVF True NCI_RA007_Epitope_Rep3 1174.5870038394198 1174.5859099358602 78.367 2 -1.5838396002164257 0.42635562019908185 1.0 ['IDI2|p.E126Q|1|0.26|ENSG00000148377|chr10:1019825-1019825|C/G|missense_variant'] 36294 20053 GVEEEPFHTI True PC9_epitope_Rep4 1156.5400536469997 1156.53894993586 85.272 2 -1.5838397360963403 0.42635562019908185 1.0 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000535804.1_1_12:6637788-6638275:+|nuORF'] 114656 15185 TQEKIWEFKGK True NCI_RA007_Epitope_Rep2 1392.7401504358797 1392.73904993586 63.758 2 -1.5838485729619853 0.42635562019908185 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 110081 12268 TELTIESEA True PC9_epitope_Rep1 991.4709710276699 991.46986993586 52.045 2 -1.5839089859751192 0.42635562019908185 1.0 ['ENST00000398849.6_1_17:28942955-28960136:+|nuORF'] 18899 11019 ELEAVILSK True H1975_Epitope_Rep3 1000.580461907 1000.57936993586 47.474 2 -1.5839919162539187 0.42635729382087584 1.0 ['ENST00000452532.1_1_X:55935193-56041369:+|nuORF'] 125624 24536 VKKPLAAA True H1975_Epitope_Rep3 796.5170738047999 796.5165249679301 102.11 1 -1.5840644131590886 0.42635729382087584 1.0 ['MYL1|p.V11L|1|0.27|ENSG00000168530|chr2:210315012-210315012|C/A|missense_variant'] 97210 4327 SDYSFSVIAMS True NCI_RA007_Epitope_Rep1 1205.52744035797 1205.52634993586 20.938 2 -1.5841551403790142 0.4263720031814566 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 61080 26989 LIHGTADD True PC9_epitope_Rep1 840.39774651776 840.39664993586 109.98 2 -1.5842615931840243 0.4263720031814566 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 79518 13545 PCLLYVYLLYL True NCI_RA007_Epitope_Rep1 1371.7512327135498 1371.75012993586 56.696 2 -1.584283682980496 0.4263720031814566 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 63718 14525 LNCDDKVYDLM True H1975_Epitope_Rep2 1327.57882430783 1327.5777299358601 61.027 2 -1.5843264719299006 0.4263720031814566 1.0 ['TEK|p.E1066K|1|0.12|ENSG00000120156|chr9:27220141-27220141|G/A|missense_variant'] 26853 14800 FLDDRHRWQRL True NCI_RA007_Epitope_Rep1 1540.801127983 1540.80002993586 61.627 2 -1.5844597463667072 0.42638988308279646 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 128615 4730 VPTYSKEEKD True PC9_epitope_Rep2 1194.5768330785397 1194.57517490379 23.566 3 -1.5845474336300067 0.4264077625778303 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|37|1|sense'] 122694 10113 VGGGGHHL True NCI_RA007_Epitope_Rep3 732.3667211730001 732.3661749679301 46.871 1 -1.5845815795035392 0.4264142797086794 1.0 ['SYT3|p.A375Pfs*76|1|0.13|ENSG00000213023|chr19:50629452-50629452|C/-|frameshift_variant', 'ENSG00000213023|ENST00000600079|SYT3'] 115814 13679 TSDQRYVLYP True H1975_Epitope_Rep3 1240.6088019131598 1240.6077099358602 57.91 2 -1.584607659085489 0.42642079669143546 1.0 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000563908.1_1_15:72647792-72668286:-|nuORF'] 102499 21650 SLVLGTLISI True PC9_epitope_Rep1 1014.63249747986 1014.63140993586 88.105 2 -1.5847614843598514 0.4264386752258138 1.0 ['ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2'] 22183 6376 ESVAGITAI True PC9_epitope_Rep4 859.46509780159 859.46400993586 31.611 2 -1.584780920144525 0.42644519178331214 1.0 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST'] 103771 5979 SPVTSAEKKK True H1975_Epitope_Rep3 1073.6080736371698 1073.6069699358602 28.009 2 -1.5848277026953135 0.4264453608715904 1.0 ['ENST00000502360.5_1_4:130017289-130023978:+|nuORF'] 40183 17148 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 71.238 3 -1.5848724020794296 0.4264453608715904 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 121425 19083 VEVWDVVDKGK True H1975_Epitope_Rep3 1272.6714021697196 1272.6703099358601 80.021 2 -1.5849169414048279 0.4264453608715904 1.0 ['nc|ENSG00000196642|Q3YEC7-4|RABL6', 'nc|ENSG00000196642|Q3YEC7-5|RABL6', 'nc|ENSG00000196642|Q3YEC7-6|RABL6', 'nc|ENSG00000196642|Q3YEC7-3|RABL6', 'ENSG00000196642|ENST00000311502|RABL6', 'nc|ENSG00000196642|Q3YEC7-2|RABL6'] 23254 6625 EVPASPQRPSP True NCI_RA007_Epitope_Rep5 1163.59348620219 1163.5923899358602 32.146 2 -1.584930152948478 0.4264453608715904 1.0 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF'] 70261 18967 LVRKARSHIG True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 79.794 2 -1.584938029346319 0.4264453608715904 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 125627 23535 VKKPLAAA True PC9_epitope_Rep6 796.5170738047999 796.5165249679301 103.67 1 -1.5849448501744436 0.4264453608715904 1.0 ['MYL1|p.V11L|1|0.27|ENSG00000168530|chr2:210315012-210315012|C/A|missense_variant'] 97899 4259 SELYQVLHACK True PC9_epitope_Rep3 1289.64380752289 1289.64217490379 21.496 3 -1.584947460648337 0.4264453608715904 1.0 ['ENSG00000157851|ENST00000288699|DPYSL5'] 134664 17080 VYSRANDQEP True PC9_epitope_Rep2 1177.53636524889 1177.53526993586 70.949 2 -1.5850227815569844 0.4264518767608834 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'FXR1|p.K274Rfs*23|1|0.18|ENSG00000114416|chr3:180953776-180953776|A/-|frameshift_variant', 'ENST00000479176.5_1_3:180630473-180665760:+|nuORF'] 120231 17098 VEATLALL True PC9_epitope_Rep3 828.4956696538799 828.49456993586 70.918 2 -1.58514805230281 0.42649096898784505 1.0 ['ENSG00000074181|ENST00000263388|NOTCH3'] 114331 6213 TPRDPDKE True PC9_epitope_Rep3 956.4563240230399 956.45522993586 28.938 2 -1.5853159404305164 0.42649096898784505 1.0 ['SPATA31E1|p.P1087Qfs*6|1|0.41|ENSG00000177992|chr9:87887746-87887746|C/-|frameshift_variant', 'ENSG00000177992|ENST00000325643|SPATA31E1'] 126216 14958 VLGHLPSG True PC9_epitope_Rep2 778.43373810366 778.43264993586 62.795 2 -1.5853431122142807 0.42649096898784505 1.0 ['ENST00000228567.7_1_12:33579267-33592494:-|nuORF'] 64139 17708 LPETELMDL True H1975_Epitope_Rep2 1059.51581304511 1059.51527496793 73.436 1 -1.585382963168716 0.42649096898784505 1.0 ['INTS9|p.I91M|1|0.63|ENSG00000104299|chr8:28837765-28837765|T/C|missense_variant'] 124156 9178 VGSSPLRPL True H1975_Epitope_Rep2 924.53926580136 924.5387149679301 40.256 1 -1.5854201839694884 0.42649096898784505 1.0 ['ENST00000514191.5_1_14:73404686-73407184:+|nuORF'] 116939 5781 TVFWYSSR True NCI_RA007_Epitope_Rep3 1044.50288029264 1044.5017899358602 29.719 2 -1.5854463683901114 0.42649096898784505 1.0 ['XKR7|p.G400V|1|0.32|ENSG00000260903|chr20:31996916-31996916|G/T|missense_variant'] 131404 12916 VTHPHLRQLDL True H1975_Epitope_Rep3 1327.7360681149498 1327.7349699358601 54.909 2 -1.5857521353356299 0.4265267175572519 1.0 ['NLRP5|p.G778V|1|0.28|ENSG00000171487|chr19:56032667-56032667|G/T|missense_variant'] 29630 25975 FVIFMFFLN True PC9_epitope_Rep5 1176.6041745570399 1176.60253490379 105.45 3 -1.5857908840359816 0.4265267175572519 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 49367 9778 KESQVDELNIW True NCI_RA007_Epitope_Rep2 1359.6670450652698 1359.66594993586 42.656 2 -1.585866900723013 0.42652838675966104 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 17036 9186 EGELNGRR True H1975_Epitope_Rep1 929.4678917662499 929.4673449679301 40.241 1 -1.5858992356361987 0.42652838675966104 1.0 ['nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1', 'ENSG00000198087|ENST00000359314|CD2AP'] 92012 21562 RKRNKKKKVPP True PC9_epitope_Rep3 1377.90447085273 1377.9033699358602 88.233 2 -1.5861377574654756 0.42656413285474126 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7', 'BEND7|p.K242Sfs*24|1|0.08|ENSG00000165626|chr10:13481081-13481082|-/GTAGTAAACTGAC|frameshift_variant', 'nc|ENSG00000165626|Q8N7W2-2|BEND7', 'ENSG00000165626|ENST00000466271|BEND7'] 75004 25491 NHRLQKIL True PC9_epitope_Rep1 1020.6192474575599 1020.61867496793 103.04 1 -1.5861694923024654 0.42656413285474126 1.0 ['ENST00000530529.5_1_11:108357029-108357155:-|nuORF'] 63102 19027 LLQSLRSGPP True NCI_RA007_Epitope_Rep5 1066.61349337078 1066.6129749679299 80.044 1 -1.5861756569985639 0.42656580113132964 1.0 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 74642 15981 NGLKSLSA True NCI_RA007_Epitope_Rep1 788.43921740692 788.43812993586 66.265 2 -1.586190371010953 0.42656580113132964 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 32459 22494 GGAHASYY True H1975_Epitope_Rep3 824.34531702208 824.34420993586 94.023 2 -1.5863454704845497 0.42658367314485623 1.0 ['nc|ENSG00000158882|Q969M1-2|TOMM40L', 'ENSG00000158882|ENST00000367988|TOMM40L'] 130558 23183 VSRKGRTP True PC9_epitope_Rep1 899.5300980999899 899.52900993586 93.968 2 -1.5864357208996342 0.42660154475238526 1.0 ['ENST00000496823.1_1_3:187455030-187463237:-|nuORF'] 24738 22755 FAQGQKNRVK True PC9_epitope_Rep6 1174.6570895182601 1174.6559899358601 100.61 2 -1.5864645274418583 0.4266032121033143 1.0 ['PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant'] 112868 12508 TLKHSRWV True PC9_epitope_Rep6 1025.57704829241 1025.57594993586 59.539 2 -1.5864723521848416 0.4266032121033143 1.0 ['ENST00000544091.1_1_X:78200967-78216108:+|nuORF', 'ENST00000171757.2_1_X:78207807-78216108:+|nuORF'] 70124 16288 LVPKAITS True NCI_RA007_Epitope_Rep5 827.51165407119 827.51054993586 69.408 2 -1.5865290787051718 0.4266097247935668 1.0 ['ENST00000467766.5_1_3:23853000-23929107:+|nuORF'] 55266 10903 LADPEVRTG True PC9_epitope_Rep5 956.4927095317599 956.49160993586 46.926 2 -1.5868723491254872 0.42662274973025155 1.0 ['ENSG00000198690|ENST00000362065|FAN1', 'ENST00000565280.5_1_15:31198658-31229456:+|nuORF'] 97424 8450 SEEDRKNVLR True PC9_epitope_Rep2 1244.6473126802 1244.64565490379 37.871 3 -1.5868900791944998 0.42662274973025155 1.0 ['ENSG00000109063|ENST00000583535|MYH3'] 130810 13264 VTAPHADP True PC9_epitope_Rep3 806.3922672145 806.39116993586 56.053 2 -1.5869394104699455 0.426629261976694 1.0 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 138965 13686 YKLKKEKE True PC9_epitope_Rep3 1064.62299542532 1064.62188993586 57.716 2 -1.5869753914456506 0.4266357740752098 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 113223 20012 TLQLYNSVK True PC9_epitope_Rep2 1064.5866099165999 1064.58550993586 82.38 2 -1.5871301873301746 0.4266422860258041 1.0 ['ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-2|IL12RB1', 'nc|ENSG00000096996|P42701-3|IL12RB1'] 16671 7399 EEQVRSFQVP True NCI_RA007_Epitope_Rep2 1217.6040508858898 1217.6029499358601 33.406 2 -1.58714177017914 0.42664395229982965 1.0 ['ENSG00000089163|ENST00000202967|SIRT4'] 124219 12286 VGTEWLWK True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 52.246 2 -1.5871456613136996 0.42664395229982965 1.0 ['ENSG00000277149|ENST00000620995|TYW1B'] 32619 24809 GGKAALAPA True PC9_epitope_Rep4 754.43373810366 754.4331849679301 103.93 1 -1.5872025872715299 0.4266569754236133 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 97344 10060 SECKGKQYVK True PC9_epitope_Rep4 1168.5910436740398 1168.58938490379 46.364 3 -1.5872468669543849 0.4266569754236133 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0-4|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0|ABI3BP', 'ENST00000497021.1_1_3:100471523-100484734:-|nuORF', 'nc|ENSG00000154175|Q7Z7G0-2|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0-3|ABI3BP', 'ENST00000470336.5_1_3:100469341-100565327:-|nuORF'] 120962 5601 VEPHSPSPSSK True NCI_RA007_Epitope_Rep1 1150.56185172074 1150.56074993586 25.85 2 -1.5873114147705143 0.4266586412883004 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 18582 5744 EKQKDSRSQA True H1975_Epitope_Rep2 1175.58946345091 1175.58836993586 27.092 2 -1.5873174840794073 0.4266586412883004 1.0 ['KDM3B|p.G452D|1|0.24|ENSG00000120733|chr5:138386596-138386596|G/A|missense_variant'] 91196 26242 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 109.38 1 -1.5873448767384195 0.42667166348687197 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 40555 15793 HRFWYNYRQRK True H1975_Epitope_Rep1 1652.84366150132 1652.8425699358602 66.053 2 -1.5873875806146052 0.42667166348687197 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 61655 2867 LKRKLKFLIY True H1975_Epitope_Rep3 1320.8645631033598 1320.86290490379 15.228 3 -1.5874935028677912 0.4266781743643322 1.0 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E', 'ENST00000380503.7_1_16:30007553-30007939:+|nuORF', 'ENST00000568043.5_1_16:30007580-30007859:+|nuORF'] 74641 15887 NGLKSLSA True NCI_RA007_Epitope_Rep1 788.43921740692 788.43812993586 65.896 2 -1.5875593011853077 0.42668982979641423 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 17084 14719 EGKPSRKRLH True NCI_RA007_Epitope_Rep2 1206.69453765614 1206.6934499358601 61.925 2 -1.5875668704767683 0.42668982979641423 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 134968 13499 WAWPRTPWRRW True NCI_RA007_Epitope_Rep1 1596.8214695047598 1596.82036993586 56.513 2 -1.5875814117783098 0.42668982979641423 1.0 ['ENST00000608648.1_1_19:18235548-18239224:+|nuORF'] 115593 23083 TRTIRRKRWRR True PC9_epitope_Rep3 1583.9709277031097 1583.9698299358602 94.057 2 -1.5876489772774007 0.42668982979641423 1.0 ['ENST00000399933.7_1_9:6007594-6007651:-|nuORF'] 44641 12172 ILSGLSVPTK True H1975_Epitope_Rep3 1013.61209638845 1013.61098993586 51.99 2 -1.5876976091422768 0.42668982979641423 1.0 ['ABCA8|p.K697Nfs*16|1|0.29|ENSG00000141338|chr17:68907810-68907810|G/-|frameshift_variant', 'ABCA8|p.L1036Cfs*11|1|0.12|ENSG00000141338|chr17:68887425-68887425|G/-|frameshift_variant', 'ENST00000541225.5_1_17:66883094-66937097:-|nuORF', 'nc|ENSG00000141338|O94911-1|ABCA8', 'ENSG00000141338|ENST00000586539|ABCA8'] 112888 20792 TLKQSSRLV True PC9_epitope_Rep6 1030.61349337078 1030.6123899358602 92.744 2 -1.5877738466360878 0.42668982979641423 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 57437 7903 LEATVDLAFP True H1975_Epitope_Rep3 1074.5597264624198 1074.5586299358602 35.372 2 -1.587795921638502 0.42668982979641423 1.0 ['ENSG00000139793|ENST00000679496|MBNL2'] 26724 19683 FIWLIRSLYE True NCI_RA007_Epitope_Rep5 1338.7336085034601 1338.73195490379 82.623 3 -1.587817771596873 0.42668982979641423 1.0 ['ENSG00000167207|ENST00000647318|NOD2', 'nc|ENSG00000167207|Q9HC29|NOD2'] 129148 8794 VQRHPHPGP True PC9_epitope_Rep6 1023.5362461095899 1023.53514993586 43.727 2 -1.5878447779048401 0.42668982979641423 1.0 ['ENST00000475975.5_1_22:30770077-30772445:+|nuORF', 'ENST00000405659.5_2_22:30769731-30772445:+|nuORF'] 127935 16302 VPGWKLCP True NCI_RA007_Epitope_Rep4 898.4734947406598 898.47238993586 70.699 2 -1.5879708495933493 0.42668982979641423 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 80984 14718 PIHQVRHMAF True H1975_Epitope_Rep3 1234.63933127914 1234.6382299358602 61.986 2 -1.58800952290983 0.42668982979641423 1.0 ['ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2', 'ENST00000497188.1_1_1:155234069-155238352:-|nuORF'] 60166 11565 LGNSIMVLLIY True NCI_RA007_Epitope_Rep1 1234.6995314938601 1234.69842993586 48.954 2 -1.5881168450445466 0.42668982979641423 1.0 ['OR2M7|p.M40L|1|0.1|ENSG00000177186|chr1:248324451-248324451|T/A|missense_variant'] 15641 12741 EASVSALGLLP True H1975_Epitope_Rep3 1055.5862755634298 1055.5851699358602 54.22 2 -1.588132918534016 0.42668982979641423 1.0 ['ENST00000254480.9_1_3:47755977-47762221:-|nuORF'] 15587 8278 EAQTFNSQVGL True H1975_Epitope_Rep1 1192.57241640444 1192.57187496793 36.775 1 -1.5881714240944353 0.42668982979641423 1.0 ['PAPPA2|p.E252Q|1|0.23|ENSG00000116183|chr1:176557076-176557076|G/C|missense_variant'] 122712 8271 VGGGRQRPPQ True NCI_RA007_Epitope_Rep1 1050.56827451386 1050.5671699358602 36.171 2 -1.588206600416909 0.4266963393587065 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'FAM120A|p.V222Sfs*18|1|0.06|ENSG00000048828|chr9:93471326-93471348|TGAAGTTGCCAAGCAACTGGACC/-|frameshift_variant'] 29622 26062 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 106.16 3 -1.5885469553984757 0.42673206621704474 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 131276 23577 VTFVLQLFLFL True PC9_epitope_Rep4 1338.79514613086 1338.79351490379 98.995 3 -1.5886011111378402 0.42673206621704474 1.0 ['ENSG00000177108|ENST00000319374|ZDHHC22'] 58015 12116 LEHLRITV True PC9_epitope_Rep4 979.58146496651 979.58036993586 54.412 2 -1.5887256164598118 0.42673857507805846 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 79543 19447 PDDCGDGG True PC9_epitope_Rep2 734.2177335504599 734.21718496793 80.182 1 -1.5887345119797085 0.4267450837912712 1.0 ['ENST00000406420.7_1_2:24239147-24246476:+|nuORF'] 42228 18662 IDSLDALVKL True PC9_epitope_Rep2 1085.63322575585 1085.6321299358601 77.148 2 -1.5888754845684052 0.42674674720134426 1.0 ['nc|ENSG00000171962|Q9H069-2|DRC3', 'ENSG00000171962|ENST00000399187|DRC3'] 30090 25003 FYKKKYRVGNS True PC9_epitope_Rep2 1388.7564692063597 1388.75536993586 101.84 2 -1.5888772386548888 0.42674674720134426 1.0 ['ENST00000256497.8_1_3:5261359-5261473:+|nuORF'] 56769 9197 LDLSEPGTL True H1975_Epitope_Rep2 943.48622716899 943.4856749679301 40.33 1 -1.5889884710039943 0.42675658186029086 1.0 ['TTBK1|p.V881L|1|0.31|ENSG00000146216|chr6:43283381-43283381|G/T|missense_variant'] 18275 20451 EIRAIRQARAR True H1975_Epitope_Rep1 1338.79564867974 1338.79454993586 85.06 2 -1.5890038412860101 0.42675658186029086 1.0 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 60163 10973 LGNSIMVLLIY True H1975_Epitope_Rep3 1234.6995314938601 1234.69842993586 47.296 2 -1.589010066621577 0.42675658186029086 1.0 ['OR2M7|p.M40L|1|0.1|ENSG00000177186|chr1:248324451-248324451|T/A|missense_variant'] 139724 12367 YNRLVDYI True PC9_epitope_Rep6 1054.5447451046198 1054.54364993586 58.975 2 -1.5890176340363298 0.42675658186029086 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'ENST00000493587.1_1_8:100883622-100887891:+|nuORF'] 16055 5605 EDWWSYKDNL True H1975_Epitope_Rep1 1354.5829810881398 1354.58188993586 26.626 2 -1.5890615602344604 0.42675658186029086 1.0 ['CA11|p.P86Hfs*2|1|0.45|ENSG00000063180|chr19:48644455-48644455|G/-|frameshift_variant', 'ENSG00000063180|ENST00000084798|CA11'] 32632 23513 GGLLYLQFLRR True PC9_epitope_Rep2 1334.7822900313797 1334.78065490379 95.915 3 -1.589088086095815 0.42676308977793925 1.0 ['ENST00000491710.5_3_6:12015770-12015848:+|nuORF'] 124314 5458 VGTPPSPQ True PC9_epitope_Rep6 781.39701824177 781.39592993586 28.928 2 -1.5892408448637823 0.4267777676868586 1.0 ['nc|ENSG00000235927|Q8NBZ9|NEXN-AS1'] 98563 10877 SFQTLSAVFR True PC9_epitope_Rep1 1154.6084079903399 1154.60730993586 46.723 2 -1.5892832791614155 0.4267777676868586 1.0 ['MYH13|p.V651L|1|0.4|ENSG00000006788|chr17:10340345-10340345|C/A|missense_variant'] 87395 17643 QPVSDKYF True PC9_epitope_Rep2 982.47599683846 982.47488993586 73.144 2 -1.5893436134729455 0.4267777676868586 1.0 ['ENSG00000114124|ENST00000682958|GRK7'] 62896 21397 LLNLVKEV True PC9_epitope_Rep2 926.58006798418 926.57896993586 87.774 2 -1.5893654814538338 0.4267777676868586 1.0 ['ENST00000376552.6_1_9:82186844-82187042:+|nuORF'] 113259 4495 TLRFIKYSRVW True NCI_RA007_Epitope_Rep2 1467.83505388023 1467.83341490379 22.115 3 -1.589483701226507 0.4267956271498144 1.0 ['ENST00000450006.7_1_8:21961603-21961870:+|nuORF'] 60443 13561 LGVLREGL True PC9_epitope_Rep4 855.5178020807899 855.51670993586 60.058 2 -1.5895654968716102 0.426810302748232 1.0 ['ENSG00000146909|ENST00000275820|NOM1'] 94038 22681 RRKRRERKQR True H1975_Epitope_Rep3 1467.9083274465495 1467.9072299358602 94.782 2 -1.5896206169082372 0.426810302748232 1.0 ['ENSG00000130764|ENST00000378251|LRRC47'] 129877 23427 VRRVLQIPMW True PC9_epitope_Rep4 1296.7488817281198 1296.74722490379 98.398 3 -1.589647527317035 0.426810302748232 1.0 ['KCNT2|p.I629Mfs*5|1|0.2|ENSG00000162687|chr1:196333957-196333957|A/-|frameshift_variant', 'KCNT2|p.S950Lfs*28|1|0.58|ENSG00000162687|chr1:196280921-196280921|G/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2', 'ENST00000498426.5_1_1:196286396-196434478:-|nuORF', 'KCNT2|p.Q343H|2|0.22|ENSG00000162687|chr1:196425944-196425944|C/A|missense_variant'] 14838 16376 DVVKVLSKTTE True H1975_Epitope_Rep1 1217.68671788069 1217.68562993586 68.348 2 -1.5896505605135887 0.426810302748232 1.0 ['nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21', 'ENSG00000214193|ENST00000453908|SH3D21'] 91361 19503 RHAYWPERRRS True PC9_epitope_Rep1 1512.78106124476 1512.7799699358602 79.836 2 -1.5897998585327997 0.42686221536086455 1.0 ['ENST00000360240.10_1_3:48130367-48130646:-|nuORF'] 135123 12382 WEEMRDKMRKW True NCI_RA007_Epitope_Rep2 1593.7544376843698 1593.7533499358601 52.77 2 -1.5900066118541019 0.4269141267949373 1.0 ['ENSG00000104412|ENST00000220853|EMC2', 'ENST00000517593.5_1_8:109455866-109468189:+|nuORF'] 69768 25127 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 105.27 3 -1.5900568313744512 0.42692063203777697 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 140479 25490 YRKEIKPPFK True NCI_RA007_Epitope_Rep5 1304.7604919576395 1304.75938993586 105.58 2 -1.590208119843191 0.42692879601357564 1.0 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'ENST00000491836.2_1_6:166853785-166873036:-|nuORF'] 27214 15273 FLNKSFHRDRR True H1975_Epitope_Rep1 1474.7905632993 1474.78946993586 64.014 2 -1.5902288007287084 0.42692879601357564 1.0 ['ENST00000215906.5_1_22:26829359-26829413:+|nuORF'] 91912 24818 RKLLERLPE True H1975_Epitope_Rep1 1152.69789170108 1152.6967899358601 102.78 2 -1.5902399891457049 0.42692879601357564 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 83537 14192 PTTVSQGLK True PC9_epitope_Rep1 929.5181960036099 929.51708993586 59.412 2 -1.5902937817522953 0.4269517551326138 1.0 ['ENSG00000081721|ENST00000367943|DUSP12'] 11254 22238 DEFKRYVNKL True PC9_epitope_Rep1 1310.6982856239 1310.69718993586 90.362 2 -1.5903025521101235 0.4269517551326138 1.0 ['ATP2A2-IFT81|2|fusion', 'ENSG00000122970|ENST00000242591|IFT81'] 23171 13441 EVLFSEVTFY True H1975_Epitope_Rep1 1232.59650589396 1232.59540993586 56.814 2 -1.5904369419861468 0.4269517551326138 1.0 ['ENST00000302609.7_1_10:38241148-38241220:-|nuORF'] 61790 19492 LLAQEIRDSK True PC9_epitope_Rep5 1171.6560864587498 1171.6549899358602 80.031 2 -1.590473826571811 0.4269517551326138 1.0 ['ENST00000590054.5_1_19:11457292-11462950:+|nuORF', 'nc|ENSG00000183401|P0C7I6-7|CCDC159', 'ENSG00000183401|ENST00000458408|CCDC159'] 82686 4900 PQRLLDDP True H1975_Epitope_Rep2 952.4977949121999 952.49668993586 23.931 2 -1.5904946050274886 0.4269517551326138 1.0 ['ENSG00000105737|ENST00000593562|GRIK5', 'ENST00000454993.6_1_19:42503025-42546997:-|nuORF'] 36427 10889 GVFVLFVFCL True PC9_epitope_Rep5 1142.6198246211798 1142.61817490379 46.871 3 -1.5905184751638703 0.4269517551326138 1.0 ['ENST00000406606.7_3_9:136627407-136627686:-|nuORF'] 39999 10260 HPPPLAFL True NCI_RA007_Epitope_Rep5 890.50142374066 890.50032993586 46.095 2 -1.5905489659535654 0.4269517551326138 1.0 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 72821 7471 MPLFHHQRI True NCI_RA007_Epitope_Rep3 1177.61786755857 1177.61676993586 36.507 2 -1.5905659335954656 0.4269517551326138 1.0 ['ENST00000545737.5_1_12:28410092-28458713:+|nuORF', 'ENST00000539107.5_2_12:28343406-28458716:+|nuORF'] 100925 21495 SLFFAVLVK True PC9_epitope_Rep1 1022.6164534928998 1022.6153499358601 87.524 2 -1.590577078325063 0.4269517551326138 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000433430.5_1_2:233196570-233200992:+|nuORF', 'ENST00000429283.2_1_2:233194466-233199371:+|nuORF', 'ENST00000445090.5_1_2:233194598-233200857:+|nuORF'] 61710 24182 LKYLNKIKPP True NCI_RA007_Epitope_Rep4 1212.7594293284799 1212.75778490379 104.85 3 -1.5905815669570644 0.4269517551326138 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 123333 17001 VGLRWRPL True H1975_Epitope_Rep3 995.6028691174299 995.60176993586 70.988 2 -1.5906395081536204 0.4269517551326138 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 6513 19182 APTEKNKIKRP True H1975_Epitope_Rep2 1280.7564692063597 1280.75536993586 79.618 2 -1.5906641657010192 0.4269517551326138 1.0 ['ENSG00000163781|ENST00000260810|TOPBP1'] 129425 22225 VRGFLLCA True PC9_epitope_Rep4 877.4843937775299 877.48328993586 93.727 2 -1.59071078795159 0.4269517551326138 1.0 ['ENST00000329073.8_1_12:132627816-132627993:-|nuORF'] 74442 4868 NEVDLLGPNQ True NCI_RA007_Epitope_Rep1 1097.53530261973 1097.5342099358602 23.015 2 -1.5907338655986578 0.4269517551326138 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 62122 16934 LLEFACTH True NCI_RA007_Epitope_Rep5 932.4425885352 932.44148993586 71.895 2 -1.5907549909600192 0.42695825861951564 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 42413 21272 IEDLEELDP True PC9_epitope_Rep5 1071.49718577551 1071.49667496793 86.874 1 -1.590976126072762 0.4269956195102022 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 5717 24164 APANLYVRELR True PC9_epitope_Rep5 1300.72516907808 1300.72457496793 97.932 1 -1.5910314164008692 0.4269956195102022 1.0 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-3|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'PTPRD|p.A273Qfs*4|1|0.11|ENSG00000153707|chr9:8521421-8521421|C/-|frameshift_variant'] 16604 9489 EENWKWEDLFE True H1975_Epitope_Rep3 1523.6568743043897 1523.65576993586 41.504 2 -1.5910702726566759 0.4269956195102022 1.0 ['ENSG00000196263|ENST00000308031|ZNF471'] 128886 4570 VQETVTIDNEK True NCI_RA007_Epitope_Rep2 1274.6354105838197 1274.63377490379 22.403 3 -1.591137438914674 0.4269956195102022 1.0 ['ENSG00000183607|ENST00000328895|GKN2'] 32617 25520 GGKAALAPA True PC9_epitope_Rep2 754.43373810366 754.4331849679301 103.84 1 -1.5911847292613817 0.4270134704206811 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 102800 693 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 3.8978 2 -1.5912223637634173 0.4270232853706141 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 93613 24902 RQPRPPKV True NCI_RA007_Epitope_Rep1 976.5930327097199 976.5924849679301 103.07 1 -1.5913651156864226 0.4270232853706141 1.0 ['SVA_D_dup445|chr5:69514530-69516541:-|5.086170895852312|0.1334218778948128|5.25|538.0|20|2|sense'] 104673 10274 SQTQKAKFS True PC9_epitope_Rep1 1023.5349086969098 1023.5343749679301 44.404 1 -1.5914329177337674 0.4270232853706141 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 117060 5245 TVIESSPESPV True NCI_RA007_Epitope_Rep5 1143.56593404167 1143.5648299358602 26.873 2 -1.5916137725735717 0.4270232853706141 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 16319 12791 EEGRGGNM True NCI_RA007_Epitope_Rep5 848.3446653990799 848.34356993586 55.881 2 -1.591637294021585 0.4270232853706141 1.0 ['nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8', 'ENSG00000153339|ENST00000283351|TRAPPC8'] 69960 15960 LVLGKKVG True PC9_epitope_Rep6 812.5483739330799 812.54726993586 73.688 2 -1.5917434759330114 0.42705248226950354 1.0 ['ENST00000237172.11_1_6:76203241-76203376:-|nuORF'] 60160 23064 LGNRGFKN True PC9_epitope_Rep3 904.4878989348399 904.4873549679301 93.983 1 -1.5918217230639788 0.42707033111681003 1.0 ['ENST00000592042.5_1_17:74621414-74633692:-|nuORF', 'ENSG00000070526|ENST00000156626|ST6GALNAC1'] 96138 9753 RYPDMDTESR True PC9_epitope_Rep5 1268.5455500336 1268.54444993586 42.485 2 -1.5920901214041134 0.42712906555945046 1.0 ['ENSG00000166507|ENST00000309979|NDST2'] 63133 18517 LLRHRLKTHTT True NCI_RA007_Epitope_Rep4 1374.82080079842 1374.8191649037901 80.139 3 -1.5922316882783645 0.42712906555945046 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000549395.1_1_12:51450168-51451905:+|nuORF', 'ENST00000380135.7_1_12:51450138-51451833:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-5|LETMD1', 'ENST00000546814.1_1_12:51450084-51453211:+|nuORF', 'ENST00000552433.1_1_12:51449776-51450294:+|nuORF', 'ENST00000548516.5_1_12:51450138-51453211:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-4|LETMD1'] 132934 11869 VVNGGVPWP True PC9_epitope_Rep6 923.4865019525099 923.48540993586 56.871 2 -1.5923178773794022 0.42712906555945046 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 36234 9573 GVDEPVAAAAA True H1975_Epitope_Rep1 969.4767251144498 969.47562993586 41.745 2 -1.5924265794782164 0.42712906555945046 1.0 ['ENST00000367723.8_1_1:172501854-172502367:+|nuORF'] 67894 9930 LTAYEIFER True NCI_RA007_Epitope_Rep1 1140.5815245361598 1140.5804299358601 42.628 2 -1.5925030599430734 0.42712906555945046 1.0 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 70230 8261 LVQQQHVED True NCI_RA007_Epitope_Rep1 1094.5356369729 1094.53452993586 36.132 2 -1.5925176126630662 0.42712906555945046 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'nc|ENSG00000114841|Q9P2D7-3|DNAH1', 'ENST00000497875.1_1_3:52356446-52387784:+|nuORF', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 93871 13806 RREPLLNHL True NCI_RA007_Epitope_Rep3 1146.6621748987 1146.66052490379 61.634 3 -1.5925535047775516 0.42712906555945046 1.0 ['DEPDC7|p.S312R|1|0.42|ENSG00000121690|chr11:33031531-33031531|T/A|missense_variant'] 25830 7770 FFFFFEDFVWL True PC9_epitope_Rep2 1542.72237511342 1542.72073490379 35.261 3 -1.5925600828258524 0.42712906555945046 1.0 ['ENST00000306336.5_2_2:85835764-85835920:-|nuORF'] 97214 4481 SDYSFSVIAMS True NCI_RA007_Epitope_Rep2 1205.52744035797 1205.52634993586 22.062 2 -1.592583678691363 0.42712906555945046 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 120309 6490 VEDTNGSETG True H1975_Epitope_Rep2 1007.40434801983 1007.40324993586 29.88 2 -1.5926731544353234 0.42712906555945046 1.0 ['ENST00000496524.5_1_2:110922048-110962545:-|nuORF', 'nc|ENSG00000144061|O15259|NPHP1', 'nc|ENSG00000144061|O15259-4|NPHP1'] 136642 20267 WWRFNYRQLYF True PC9_epitope_Rep4 1677.8204664452498 1677.81936993586 86.1 2 -1.5928109512601887 0.42712906555945046 1.0 ['nc|ENSG00000076356|O75051-2|PLXNA2', 'ENST00000460870.1_1_1:208383501-208390355:-|nuORF'] 37509 10730 GVVDPGKV True H1975_Epitope_Rep3 769.4334037504899 769.43230993586 46.351 2 -1.5929084111820744 0.42712906555945046 1.0 ['nc|ENSG00000171931|Q5XX13-3|FBXW10', 'nc|ENSG00000171931|Q5XX13-4|FBXW10', 'ENSG00000171931|ENST00000395665|FBXW10', 'nc|ENSG00000171931|Q5XX13-2|FBXW10'] 10642 4133 CPKLQLWEWRN True H1975_Epitope_Rep1 1471.7394392432298 1471.73779490379 20.823 3 -1.5929658334262808 0.42712906555945046 1.0 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 83444 20491 PTPDELHFL True H1975_Epitope_Rep2 1067.52876068731 1067.52766993586 84.897 2 -1.592974339345673 0.42712906555945046 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4', 'ENSG00000099308|ENST00000687212|MAST3', 'ENST00000608648.1_1_19:18220994-18239762:+|nuORF', 'nc|ENSG00000099308|O60307|MAST3'] 56650 16606 LDIQHVLDKL True NCI_RA007_Epitope_Rep2 1192.6815729306 1192.6804699358602 69.323 2 -1.592979772846203 0.42712906555945046 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 113665 19270 TLWKGKMKPP True H1975_Epitope_Rep3 1184.6739854523598 1184.6728899358602 80.795 2 -1.5931072028493318 0.42712906555945046 1.0 ['ENSG00000160994|ENST00000292574|CCDC105'] 88856 9446 QVDERAKGNG True H1975_Epitope_Rep2 1072.52613491836 1072.5250299358602 41.301 2 -1.5931096471150932 0.42712906555945046 1.0 ['ENSG00000080371|ENST00000261263|RAB21'] 32493 5283 GGDEWEWSWA True PC9_epitope_Rep5 1221.4727023631701 1221.4710449037902 25.337 3 -1.593143253976143 0.42712906555945046 1.0 ['ENST00000531791.1_1_11:65149760-65149886:-|nuORF'] 20635 21288 EPVTLKLSP True PC9_epitope_Rep1 982.5698972232999 982.56880993586 86.71 2 -1.5931581143953737 0.42712906555945046 1.0 ['nc|ENSG00000184908|P51801-2|CLCNKB', 'ENSG00000184908|ENST00000375679|CLCNKB'] 142165 19826 YVTEEIKNP True PC9_epitope_Rep4 1091.54989005471 1091.5487899358602 84.389 2 -1.5931640701004275 0.42712906555945046 1.0 ['ENSG00000155465|ENST00000674313|SLC7A7'] 125705 18814 VKQNRKQRE True NCI_RA007_Epitope_Rep4 1184.6738022115599 1184.67327496793 81.39 1 -1.5931804094394406 0.42712906555945046 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5'] 123159 18332 VGKSLKDL True PC9_epitope_Rep2 858.51746772762 858.51636993586 75.843 2 -1.5931997977990082 0.42712906555945046 1.0 ['ENST00000403332.2_1_6:129478670-129479855:-|nuORF'] 95048 6414 RTSSTPEP True PC9_epitope_Rep6 873.4192102383299 873.41810993586 33.287 2 -1.5932356893838056 0.42712906555945046 1.0 ['nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 89338 6023 QWQRYQHQWQR True H1975_Epitope_Rep2 1642.78654054802 1642.78544993586 28.146 2 -1.5933232839815772 0.42713071888010345 1.0 ['ENST00000577066.2_1_17:79004653-79005004:-|nuORF'] 131568 19414 VTLGPRFLGAG True PC9_epitope_Rep5 1086.61857875122 1086.61748993586 79.724 2 -1.5933246114906527 0.42713071888010345 1.0 ['ENST00000429687.7_1_14:20811743-20811776:+|nuORF'] 72743 9105 MNLESVTPM True NCI_RA007_Epitope_Rep4 1020.46200365044 1020.46090993586 41.862 2 -1.5933910398412876 0.42713237212573596 1.0 ['nc|ENSG00000119440|Q5VSP4|LCN1P1', 'ENSG00000160349|ENST00000371781|LCN1'] 71518 9209 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.7988149037901 40.43 3 -1.593398779044011 0.42713237212573596 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 42012 11578 IDGGAKVKNYV True NCI_RA007_Epitope_Rep1 1162.63462273818 1162.63352993586 49.005 2 -1.5934936772551016 0.4271615581822719 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 133219 16329 VVSKPVTV True NCI_RA007_Epitope_Rep4 827.51165407119 827.51054993586 70.806 2 -1.5936492550217323 0.4271972412541404 1.0 ['ENSG00000196700|ENST00000369888|ZNF512B'] 75662 22811 NLGFGWGV True H1975_Epitope_Rep2 848.4180880395198 848.41698993586 94.185 2 -1.5936693349244575 0.4271972412541404 1.0 ['ENST00000498141.1_1_15:74630890-74631634:-|nuORF', 'nc|ENSG00000140459|P05108-2|CYP11A1', 'CYP11A1|p.R465Tfs*5|1|0.34|ENSG00000140459|chr15:74338616-74338617|-/A|frameshift_variant', 'ENSG00000140459|ENST00000268053|CYP11A1'] 13914 7291 DQVVVDNVFPN True H1975_Epitope_Rep3 1244.6037165327198 1244.60260993586 33.019 2 -1.5937665291101357 0.4272037387842145 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF'] 59876 8753 LGGAREVP True NCI_RA007_Epitope_Rep2 797.4395517600899 797.43900496793 38.693 1 -1.5937839147071013 0.4272102361668822 1.0 ['ENSG00000136274|ENST00000490531|NACAD'] 71582 287 MCTNKRRHAW True H1975_Epitope_Rep1 1301.62336394517 1301.62171490379 1.5147 3 -1.5938315211980323 0.427211887477314 1.0 ['ENST00000514654.5_1_3:130694284-130698131:+|nuORF'] 89839 22296 RARADAAAAA True PC9_epitope_Rep2 942.4995262476998 942.49842993586 91.239 2 -1.5938976055140668 0.427211887477314 1.0 ['ENST00000533032.1_1_11:65374739-65375163:-|nuORF'] 37371 20709 GVSKKGGS True PC9_epitope_Rep2 718.3973525949399 718.39680496793 85.093 1 -1.593958530311614 0.4272183845464548 1.0 ['ENST00000240185.7_1_1:11083899-11083992:+|nuORF'] 58471 16128 LEPWERTV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 69.975 2 -1.5941422651977109 0.42722488146820625 1.0 ['ENSG00000165389|ENST00000298130|SPTSSA'] 35817 7747 GTLAELQGLP True PC9_epitope_Rep2 997.54441075145 997.54330993586 35.174 2 -1.5942906376385926 0.42724437134917487 1.0 ['ENSG00000146242|ENST00000369750|TPBG'] 87515 21419 QQHLRHLAV True PC9_epitope_Rep5 1100.6203100867199 1100.61920993586 87.452 2 -1.5942920420073787 0.42724437134917487 1.0 ['ENST00000470876.1_1_5:133910554-133910710:+|nuORF'] 122012 17859 VFVLPFPV True NCI_RA007_Epitope_Rep3 916.5422259234799 916.54112993586 78.29 2 -1.5942943210152825 0.42724437134917487 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 65176 4421 LQQITWQT True NCI_RA007_Epitope_Rep5 1016.52909504048 1016.52798993586 23.639 2 -1.5945195885043464 0.42729139020268353 1.0 ['nc|ENSG00000069667|P35398-4|RORA', 'ENSG00000069667|ENST00000335670|RORA', 'nc|ENSG00000069667|P35398-3|RORA', 'nc|ENSG00000069667|P35398-1|RORA'] 59315 20495 LFHWRTRLRRK True NCI_RA007_Epitope_Rep2 1567.93241693607 1567.93130993586 84.794 2 -1.5945349173367307 0.42729139020268353 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 80731 15486 PHEGSFGF True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 66.262 2 -1.594632795707627 0.42729149182298637 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 12839 12232 DLGQCHSLW True PC9_epitope_Rep5 1057.46511488493 1057.46400993586 52.036 2 -1.5946924340129038 0.42729149182298637 1.0 ['ENST00000401867.5_1_5:131562537-131562693:-|nuORF'] 16355 7869 EEIHAFRQLE True H1975_Epitope_Rep3 1270.6305999868998 1270.6295099358601 35.244 2 -1.5946945830624077 0.42729149182298637 1.0 ['nc|ENSG00000293505|Q96P88|GNRHR2'] 110080 25132 TELTGLKK True NCI_RA007_Epitope_Rep1 888.5280324113199 888.52692993586 104.0 2 -1.5948583377552525 0.42729149182298637 1.0 ['ENSG00000189186|ENST00000451261|DCAF8L2'] 97217 5272 SDYSFSVIAMS True PC9_epitope_Rep1 1205.52744035797 1205.52634993586 25.124 2 -1.5949491322370428 0.42729149182298637 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 30994 17087 GASGGGGD True PC9_epitope_Rep5 576.21396849936 576.2134249679301 70.746 1 -1.5949557637574376 0.42729149182298637 1.0 ['ENST00000521689.5_1_8:98881135-98900426:+|nuORF'] 73857 12370 NAQCVNTPCSY True NCI_RA007_Epitope_Rep5 1198.47469359246 1198.4735899358602 54.227 2 -1.5949843409204505 0.42729149182298637 1.0 ['FBN2|p.G1430C|1|0.15|ENSG00000138829|chr5:128330630-128330630|C/A|missense_variant'] 82531 23566 PPRRKSRRRIF True H1975_Epitope_Rep3 1467.9011168077898 1467.90000993586 98.322 2 -1.5950310040367137 0.4273093280408279 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B'] 119434 13380 VAQQRYWEWTP True PC9_epitope_Rep3 1462.6993482530597 1462.69824993586 56.498 2 -1.5952753425933273 0.42736283426705074 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 36841 22722 GVLHTAAA True H1975_Epitope_Rep1 738.4024379753799 738.4018849679301 94.512 1 -1.5952921950967711 0.42736283426705074 1.0 ['ANKRD52|p.L209V|1|0.2|ENSG00000139645|chr12:56254646-56254646|G/C|missense_variant'] 82323 21898 PPIMLIGH True PC9_epitope_Rep3 876.4891448047999 876.48804993586 89.535 2 -1.5953003931301823 0.42736283426705074 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 33915 25414 GLQVRFLRLAF True PC9_epitope_Rep2 1318.7873754118198 1318.7862699358602 103.44 2 -1.595498987150706 0.427380668866737 1.0 ['ENSG00000221838|ENST00000359593|AP4M1'] 130787 8003 VTAGPARS True NCI_RA007_Epitope_Rep2 757.4082516318101 757.40714993586 35.76 2 -1.5955624365956667 0.427400149690413 1.0 ['ENST00000457782.5_1_3:48298351-48298444:+|nuORF'] 64451 12141 LPPLHPSAM True PC9_epitope_Rep2 961.50552314493 961.50442993586 52.011 2 -1.5956114326950106 0.427400149690413 1.0 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1'] 30494 19651 GAGDLGGF True NCI_RA007_Epitope_Rep3 692.31295426464 692.3124049679301 85.704 1 -1.595646156957497 0.427400149690413 1.0 ['ENST00000246672.3_1_17:38251239-38251841:-|nuORF'] 7676 23775 ASKTNFLLGVL True NCI_RA007_Epitope_Rep5 1161.6757592741699 1161.67411490379 98.802 3 -1.595706051824869 0.4274066430037536 1.0 ['nc|ENSG00000205754|G3V0H7|SLCO1B7', 'nc|ENSG00000257046|F5H094|SLCO1B3-SLCO1B7'] 95515 22015 RWQRKKTT True PC9_epitope_Rep6 1102.6359601508598 1102.63486993586 97.602 2 -1.5957630412968011 0.4274164285390303 1.0 ['ENST00000367264.6_2_1:202698186-202698243:-|nuORF'] 58261 11346 LELQFPRTP True H1975_Epitope_Rep2 1099.60259433391 1099.6014899358602 48.691 2 -1.5958381334222786 0.4274164285390303 1.0 ['ENSG00000132688|ENST00000368223|NES'] 9452 10374 AVVGGGESLWE True PC9_epitope_Rep5 1102.5294889632999 1102.52838993586 44.888 2 -1.595839002556696 0.4274164285390303 1.0 ['ENST00000557600.5_1_14:94547684-94567230:+|nuORF'] 76242 22987 NPEVLKDDF True PC9_epitope_Rep2 1075.51858992643 1075.51748993586 93.913 2 -1.5959289360504807 0.4274164285390303 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14'] 43217 20848 IFIVAGLAALV True PC9_epitope_Rep5 1085.68486740589 1085.68376993586 85.241 2 -1.596029643830847 0.4274164285390303 1.0 ['nc|ENSG00000181885|O95471-2|CLDN7', 'ENSG00000181885|ENST00000360325|CLDN7'] 10680 2197 CQPRRMKERS True NCI_RA007_Epitope_Rep2 1289.64449331257 1289.6428349037901 12.006 3 -1.5960920840659258 0.42741807461163395 1.0 ['ENST00000268182.9_1_15:91043340-91043523:+|nuORF'] 8828 7506 AVEEYVYDFRD True PC9_epitope_Rep2 1404.6197605196796 1404.61866993586 34.241 2 -1.596144082070307 0.42741807461163395 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 22487 22899 ETFRPKRGAA True H1975_Epitope_Rep1 1131.6148903531098 1131.61324490379 95.23 3 -1.5962103331805098 0.42743590615822474 1.0 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 133058 26235 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 106.68 2 -1.596263240916109 0.4274537373004354 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 6480 15971 APSNTFVAP True PC9_epitope_Rep1 902.4497820906199 902.44923496793 66.239 1 -1.596431837042305 0.4275072283009241 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 81599 25522 PLLAHLPA True PC9_epitope_Rep3 830.50142374066 830.50087496793 103.64 1 -1.596476960014022 0.4275072283009241 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 81600 25566 PLLAHLPA True PC9_epitope_Rep5 830.50142374066 830.50087496793 103.64 1 -1.596495734366111 0.4275072283009241 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 49364 9699 KESQVDELNIW True NCI_RA007_Epitope_Rep1 1359.6670450652698 1359.66594993586 41.727 2 -1.5966451934833497 0.42751536316016236 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 30530 12449 GAGNYKFQL True NCI_RA007_Epitope_Rep5 996.5028802926399 996.50178993586 54.542 2 -1.5967102382016591 0.42751536316016236 1.0 ['HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 138905 25457 YKHGALVRKVH True PC9_epitope_Rep2 1306.76222329314 1306.76112993586 103.6 2 -1.5967470427987764 0.42751536316016236 1.0 ['nc|ENSG00000059915|A5PKW4-2|PSD', 'ENSG00000059915|ENST00000020673|PSD', 'ENST00000479172.5_1_10:104164653-104165190:-|nuORF'] 81598 25058 PLLAHLPA True NCI_RA007_Epitope_Rep1 830.50142374066 830.50087496793 103.71 1 -1.5968973061775278 0.4275170068027211 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 126638 17897 VLNFFLLSFPI True NCI_RA007_Epitope_Rep4 1308.74819593844 1308.74708993586 77.464 2 -1.5969081136254295 0.4275170068027211 1.0 ['ENST00000591445.1_1_17:67501802-67515615:+|nuORF'] 81031 18364 PINFKVKTV True PC9_epitope_Rep6 1044.6331661862 1044.63206993586 83.282 2 -1.5970657670716177 0.42752998798213193 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 22187 8819 ESVDAEEVVR True H1975_Epitope_Rep1 1131.54078192299 1131.53968993586 38.844 2 -1.5970849954715327 0.42752998798213193 1.0 ['ENSG00000118946|ENST00000377918|PCDH17', 'PCDH17|p.R1130T|1|0.33|ENSG00000118946|chr13:57725203-57725203|G/C|missense_variant'] 65488 25326 LRLKGHWRTP True PC9_epitope_Rep3 1262.7360085453 1262.73490993586 102.83 2 -1.597219293795895 0.4275316312185388 1.0 ['ENST00000559463.5_1_19:55897333-55897543:+|nuORF'] 142931 17787 YYYRDRDWRWV True H1975_Epitope_Rep3 1676.7848092125198 1676.78370993586 74.407 2 -1.5972223083719774 0.4275316312185388 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 122459 13211 VGEEDIRL True PC9_epitope_Rep2 929.4818104948898 929.48070993586 56.095 2 -1.5973754579133872 0.4275381214216881 1.0 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1', 'ENST00000486275.1_1_21:42817479-42821257:+|nuORF'] 42232 7984 IDSPSLKY True H1975_Epitope_Rep3 921.4807478657301 921.4801949679301 35.68 1 -1.5974616090111278 0.42754461147767725 1.0 ['IFI44|p.D302Y|1|0.04|ENSG00000137965|chr1:78659375-78659375|G/T|missense_variant'] 68529 4907 LTGHLCAP True NCI_RA007_Epitope_Rep4 810.40580910366 810.40470993586 25.333 2 -1.5976055860332599 0.42755110138651126 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 60266 7676 LGRLAHEVGW True PC9_epitope_Rep4 1136.60907669668 1136.60743490379 36.906 3 -1.5976253163262155 0.4275575911481952 1.0 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'ENST00000488281.1_1_14:47669945-47669978:-|nuORF'] 14490 19754 DTHIFGLM True NCI_RA007_Epitope_Rep5 932.4425885352 932.44148993586 82.893 2 -1.5976726913020782 0.4275592336469788 1.0 ['OR4C15|p.W287*|1|0.35|ENSG00000181939|chr11:55555166-55555166|G/-|frameshift_variant', 'ENSG00000181939|ENST00000642128|OR4C15'] 91099 27711 RFPRYLYKKM True PC9_epitope_Rep3 1400.7750964759596 1400.77398993586 114.59 2 -1.5977015689429237 0.4275592336469788 1.0 ['ENSG00000188032|ENST00000548523|C19orf67'] 38548 22642 HETGHVLG True H1975_Epitope_Rep3 848.41406528824 848.41296993586 94.63 2 -1.5979665021010903 0.4276337418235821 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 113091 14591 TLNRQKYRHVD True PC9_epitope_Rep6 1428.75859446468 1428.7574899358601 68.022 2 -1.5980551170172486 0.42764023035414683 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 74300 15122 NELDRYHRIIE True PC9_epitope_Rep4 1456.7422756941999 1456.7411699358602 66.094 2 -1.5981487627351825 0.4276451517830828 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 38164 2624 HDIPMIAQ True PC9_epitope_Rep2 923.4534875720699 923.45238993586 14.743 2 -1.598207101122309 0.4276451517830828 1.0 ['ENSG00000109771|ENST00000505916|LRP2BP', 'nc|ENSG00000109771|Q9P2M1-2|LRP2BP'] 103082 5305 SPGPQPGI True NCI_RA007_Epitope_Rep4 751.3864535580699 751.38534993586 26.961 2 -1.5982159140220122 0.4276451517830828 1.0 ['ENST00000262525.5_1_16:30798463-30798502:-|nuORF'] 65534 15383 LRRARRPWA True NCI_RA007_Epitope_Rep4 1180.70537712336 1180.70428993586 66.844 2 -1.598226571091863 0.4276451517830828 1.0 ['ENST00000455575.1_1_7:86848849-86849557:-|nuORF'] 121651 12473 VFIGAFHAL True PC9_epitope_Rep4 973.5385375253699 973.53744993586 55.783 2 -1.598229639599106 0.4276451517830828 1.0 ['GPR26|p.T173I|1|0.26|ENSG00000154478|chr10:123666925-123666925|C/T|missense_variant'] 94930 6836 RTFWYWNYNYY True NCI_RA007_Epitope_Rep1 1674.7255630008997 1674.72391490379 30.596 3 -1.5983197534162426 0.4276451517830828 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 30426 11537 GAESHASK True H1975_Epitope_Rep3 785.36678074265 785.36623496793 49.502 1 -1.5983939978600397 0.42765163966945896 1.0 ['ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-2|STX5', 'STX5|p.Q274Hfs*2|1|0.17|ENSG00000162236|chr11:62824248-62824252|TGTTC/-|frameshift_variant', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 63387 7634 LLVFEEAFF True H1975_Epitope_Rep3 1113.57464825057 1113.57354993586 34.346 2 -1.598482155765556 0.4276597674049557 1.0 ['nc|ENSG00000114923|P48751-2|SLC4A3', 'ENSG00000114923|ENST00000358055|SLC4A3', 'nc|ENSG00000114923|P48751-3|SLC4A3', 'ENST00000425141.5_1_2:220498093-220506447:+|nuORF', 'SLC4A2|p.L1095Gfs*41|1|0.28|ENSG00000164889|chr7:151075475-151075476|-/GGGTGACGGGGCT|frameshift_variant', 'nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.L785Wfs*44|1|0.53|ENSG00000004939|chr17:44251547-44251547|G/-|frameshift_variant'] 135969 17171 WQIRQVRALL True NCI_RA007_Epitope_Rep4 1281.7669743204099 1281.76531490379 74.363 3 -1.5985104571941524 0.4276597674049557 1.0 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 28339 18339 FRSGFRKND True H1975_Epitope_Rep2 1125.56794016069 1125.56629490379 76.051 3 -1.5985139129204338 0.4276597674049557 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO'] 38506 4116 HERGDVTITK True H1975_Epitope_Rep3 1154.60438523906 1154.6032899358602 20.956 2 -1.5985507734067903 0.4276614073268045 1.0 ['LRRIQ1|p.S1543Ifs*14|1|0.13|ENSG00000133640|chr12:85153747-85153748|-/ATCTTGAAAGGCAATAAAAGTC|frameshift_variant', 'nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF'] 59621 11871 LFYGGILWPF True PC9_epitope_Rep4 1211.63791721347 1211.63682993586 53.437 2 -1.598568896991472 0.4276614073268045 1.0 ['ENSG00000058063|ENST00000323116|ATP11B', 'ENST00000490303.5_1_3:182583321-182631816:+|nuORF', 'ENST00000466758.5_1_3:182602545-182631653:+|nuORF'] 27011 21146 FLERKHRRK True PC9_epitope_Rep2 1268.7578066190397 1268.75670993586 86.793 2 -1.5986471732146463 0.4276678945877019 1.0 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1', 'ENST00000536336.5_1_11:18633859-18655855:-|nuORF', 'SPTY2D1|p.E206D|1|0.32|ENSG00000179119|chr11:18615656-18615656|T/G|missense_variant', 'nc|ENSG00000179119|Q68D10-3|SPTY2D1'] 124806 15201 VHGGGGGG True NCI_RA007_Epitope_Rep5 596.26667277856 596.2661249679301 65.154 1 -1.5986633778333716 0.4276695342695547 1.0 ['ENST00000601673.1_7:6523004-6523760:+|nuORF'] 52442 5469 KKSETERK True NCI_RA007_Epitope_Rep5 1004.5614577979198 1004.56036993586 27.722 2 -1.5986833861993164 0.4276695342695547 1.0 ['ENST00000312438.7_1_11:67141097-67141175:-|nuORF'] 13691 21555 DPSLTIKSI True PC9_epitope_Rep2 972.54916177872 972.54806993586 88.38 2 -1.5988105763709952 0.4277019675401215 1.0 ['ENSG00000198712|ENST00000361739|MT-CO2'] 3145 12605 AGDEAPMS True H1975_Epitope_Rep1 776.3010692516 776.3005249679301 53.535 1 -1.5988483444224195 0.4277019675401215 1.0 ['ENSG00000130307|ENST00000252597|USHBP1'] 64469 18580 LPPWLFSRRRR True H1975_Epitope_Rep3 1482.86841969718 1482.8673299358602 77.917 2 -1.598862987530043 0.4277019675401215 1.0 ['nc|ENSG00000117281|O95971-4|CD160', 'nc|ENSG00000117281|O95971-3|CD160'] 50040 23519 KKEKEKRNEP True NCI_RA007_Epitope_Rep3 1284.7149983171998 1284.71390993586 102.05 2 -1.5989072694622435 0.4277019675401215 1.0 ['ENST00000466622.1_1_7:5028716-5028791:+|nuORF'] 52418 20682 KKRKHISG True H1975_Epitope_Rep2 952.5930327097199 952.59192993586 85.66 2 -1.5989293082207434 0.4277019675401215 1.0 ['ENST00000393791.7_1_12:57866252-57866303:-|nuORF'] 47522 19861 IVSEEIEYLL True PC9_epitope_Rep3 1206.63837070594 1206.63726993586 81.632 2 -1.5991578957432044 0.42771493981911735 1.0 ['ENSG00000133789|ENST00000318950|SWAP70', 'SWAP70|p.R376Pfs*52|1|0.18|ENSG00000133789|chr11:9738259-9738259|G/-|frameshift_variant', 'ENST00000524817.5_1_11:9685687-9762009:+|nuORF'] 43511 7785 IGLYEPELG True NCI_RA007_Epitope_Rep2 989.5069626135698 989.50586993586 34.91 2 -1.5991714175202336 0.42771493981911735 1.0 ['nc|ENSG00000186998|Q96A84-2|EMID1', 'nc|ENSG00000186998|Q96A84|EMID1', 'ENSG00000186998|ENST00000334018|EMID1'] 48608 26507 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 109.13 3 -1.5992034912562905 0.42771657826737386 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 131416 20739 VTICLRIIA True PC9_epitope_Rep5 1000.6103225666399 1000.60922993586 84.831 2 -1.5992074469293496 0.42771657826737386 1.0 ['ENSG00000188869|ENST00000359440|TMC3', 'nc|ENSG00000188869|Q7Z5M5-2|TMC3', 'ENST00000559982.1_1_15:81630174-81666445:-|nuORF'] 3750 7006 AGSPVPTPPRP True H1975_Epitope_Rep2 1074.5821932425 1074.58108993586 31.872 2 -1.5993293384916385 0.42773439713498873 1.0 ['nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 30492 6929 GAGDHRCA True NCI_RA007_Epitope_Rep2 785.32387038485 785.32276993586 31.572 2 -1.59936177956516 0.4277522155987216 1.0 ['ENST00000526142.5_1_11:419653-429752:-|nuORF'] 109284 21752 TAVHKANIMKL True PC9_epitope_Rep6 1224.7012628293598 1224.69961490379 96.562 3 -1.5993643493253311 0.427758700801233 1.0 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'nc|ENSG00000101365|O43837-3|IDH3B', 'nc|ENSG00000101365|O43837-2|IDH3B', 'ENSG00000101365|ENST00000380843|IDH3B'] 88192 19853 QRWNRFIL True PC9_epitope_Rep6 1131.63014649443 1131.6290499358602 89.023 2 -1.5994172356671315 0.4277603381647987 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'ENST00000548982.1_1_12:56717776-56718181:-|nuORF'] 84051 22465 PVVTTAAHW True PC9_epitope_Rep1 980.50796567308 980.50686993586 91.216 2 -1.5994427454136535 0.4277603381647987 1.0 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 29065 15023 FTHHIFLWLRW True NCI_RA007_Epitope_Rep2 1554.8248235496999 1554.82372993586 63.12 2 -1.5995887183456372 0.42776682305478114 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 34503 4221 GPPDWTDY True PC9_epitope_Rep3 949.38176210045 949.3806699358599 21.352 2 -1.599650047515232 0.4277765816401691 1.0 ['nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'ENSG00000127329|ENST00000334414|PTPRB'] 25877 16720 FFKLKSAC True NCI_RA007_Epitope_Rep5 942.4997094884999 942.49860993586 71.078 2 -1.5997381646955267 0.4277765816401691 1.0 ['ENST00000487257.1_2_3:57545269-57545728:+|nuORF', 'ENSG00000174840|ENST00000311180|PDE12'] 92300 20882 RLLKQKLKKKK True PC9_epitope_Rep1 1409.9922232279698 1409.99112993586 85.142 2 -1.5997755617346587 0.4277765816401691 1.0 ['ENST00000584588.5_1_17:38027782-38031519:+|nuORF'] 46822 20821 ITHVREKAID True PC9_epitope_Rep3 1180.6564208119198 1180.6553299358602 85.359 2 -1.59983292636436 0.4277765816401691 1.0 ['nc|ENSG00000163873|Q13003-2|GRIK3', 'ENSG00000163873|ENST00000373091|GRIK3'] 82769 24932 PRLSDFRRRRS True PC9_epitope_Rep2 1444.81236137304 1444.81126993586 101.57 2 -1.5998588957008606 0.4277765816401691 1.0 ['ENSG00000171522|ENST00000302472|PTGER4', 'ENST00000513635.1_1_5:40681836-40685490:+|nuORF'] 60429 14313 LGVHLRRKD True NCI_RA007_Epitope_Rep4 1092.651610215 1092.65050993586 62.359 2 -1.6001533162432795 0.4278236040609137 1.0 ['nc|ENSG00000186866|Q9Y2G5-2|POFUT2', 'nc|ENSG00000186866|Q9Y2G5-1|POFUT2', 'ENSG00000186866|ENST00000349485|POFUT2'] 124323 21408 VGTQSAGK True PC9_epitope_Rep4 746.3922672145 746.39171496793 90.519 1 -1.600167400185355 0.4278236040609137 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 86914 19471 QLSQLQQEKHQ True H1975_Epitope_Rep1 1365.70007652905 1365.69896993586 81.086 2 -1.6001716824179864 0.4278236040609137 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 125403 15200 VISNGKAG True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 65.15 1 -1.6001718004689243 0.4278236040609137 1.0 ['CON__Q28194'] 122765 14570 VGGMNRLP True PC9_epitope_Rep1 842.4432572415399 842.44214993586 60.868 2 -1.6002140430490188 0.4278236040609137 1.0 ['TP63|p.R319L|1|0.36|ENSG00000073282|chr3:189867906-189867906|G/T|missense_variant'] 88970 6719 QVIFQLRA True PC9_epitope_Rep2 973.5709002828098 973.56980993586 31.256 2 -1.6003788161555137 0.4278236040609137 1.0 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'nc|ENSG00000059145|Q9H9P5-2|UNKL'] 64514 6476 LPRGSQPMSP True H1975_Epitope_Rep3 1068.53861417836 1068.53750993586 29.878 2 -1.6004041151521187 0.4278236040609137 1.0 ['nc|ENSG00000144596|Q9C0E4-2|GRIP2', 'ENSG00000144596|ENST00000621039|GRIP2'] 108859 4594 TAAARLPPSV True H1975_Epitope_Rep2 981.5607295219299 981.55962993586 22.776 2 -1.600509853698573 0.4278236040609137 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A'] 70372 16299 LVSWGDYP True PC9_epitope_Rep3 935.4388830537498 935.43778993586 67.831 2 -1.6005531510401738 0.4278236040609137 1.0 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51446889-51452204:-|nuORF'] 31505 6075 GEDEEEVWLF True NCI_RA007_Epitope_Rep1 1251.52954853295 1251.5284499358602 27.668 2 -1.6006622816786291 0.4278252396383331 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant', 'ITPR1|p.W701C|1|0.81|ENSG00000150995|chr3:4670825-4670825|G/T|missense_variant'] 49424 18632 KEWAKWTKEEL True PC9_epitope_Rep5 1446.7507151195798 1446.7490549037902 76.693 3 -1.6006831098680883 0.4278252396383331 1.0 ['CAMTA1|p.Y297Tfs*93|1|0.06|ENSG00000171735|chr1:7663430-7663430|G/-|frameshift_variant', 'CAMTA1|p.E535Rfs*28|1|0.31|ENSG00000171735|chr1:7664148-7664148|C/-|frameshift_variant', 'nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1', 'ENSG00000171735|ENST00000303635|CAMTA1'] 97229 5366 SDYSFSVIAMS True PC9_epitope_Rep5 1205.52744035797 1205.52634993586 25.654 2 -1.6007539777498214 0.42784305283313884 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 24688 18937 FALRVGHGN True H1975_Epitope_Rep2 969.51444803585 969.51334993586 78.61 2 -1.6008741126968586 0.4278511703790986 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1'] 27955 4595 FQERNREHERH True NCI_RA007_Epitope_Rep4 1536.7294195947197 1536.72778490379 24.084 3 -1.6008883270553906 0.4278511703790986 1.0 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7', 'ENST00000537641.5_1_11:61178417-61183276:-|nuORF'] 113080 10810 TLNRQKYRHVD True H1975_Epitope_Rep1 1428.75859446468 1428.7574899358601 46.544 2 -1.6011011455555624 0.4278511703790986 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 26502 8657 FIFLFFMYFRW True H1975_Epitope_Rep1 1615.8049996219097 1615.8033449037898 38.228 3 -1.6012683271827017 0.4278641348681229 1.0 ['ENST00000510312.6_1_5:73199984-73200204:+|nuORF'] 136009 24578 WQVGAHPWIF True H1975_Epitope_Rep3 1239.61891310439 1239.6172649037899 102.27 3 -1.6012935810038482 0.4278641348681229 1.0 ['nc|ENSG00000182077|Q3KNS1|PTCHD3', 'nc|ENSG00000182077|Q3KNS1-2|PTCHD3'] 14825 4929 DVSSWTNN True NCI_RA007_Epitope_Rep4 921.3828247296101 921.38227496793 25.422 1 -1.6014587561197091 0.42789327593043675 1.0 ['PDZD2|p.D448N|1|0.09|ENSG00000133401|chr5:32010417-32010417|G/A|missense_variant'] 128534 5300 VPSVPPVP True NCI_RA007_Epitope_Rep3 790.45889022234 790.45778993586 27.858 2 -1.6018081918066733 0.427933745723155 1.0 ['nc|ENSG00000126337|O76013-2|KRT36', 'ENSG00000126337|ENST00000328119|KRT36', 'CON__O76013'] 28629 16703 FSISSKTSNHY True PC9_epitope_Rep6 1269.5989655054502 1269.5978699358602 76.724 2 -1.6018709575146628 0.4279467077536593 1.0 ['ENSG00000214891|ENST00000617704|TRIM64C'] 127873 15072 VPGDMAREPV True PC9_epitope_Rep3 1069.52262976105 1069.5215299358601 63.109 2 -1.601876678314208 0.4279467077536593 1.0 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR', 'ENST00000459993.5_1_3:56657067-56667992:-|nuORF'] 7310 24623 ARKQHRHSIA True PC9_epitope_Rep4 1202.6744709179 1202.6733699358601 103.2 2 -1.6020352232168198 0.42796451755429427 1.0 ['ENST00000423517.6_1_7:82450377-82450656:-|nuORF'] 119968 16510 VDPEADRFFSM True H1975_Epitope_Rep3 1312.57578753272 1312.57468993586 69.003 2 -1.6021582565279802 0.4279823269513991 1.0 ['nc|ENSG00000172367|Q86UT5-3|NHERF4', 'ENSG00000172367|ENST00000355547|NHERF4', 'nc|ENSG00000172367|Q86UT5|NHERF4', 'PDZD3|p.R481Dfs*16|1|0.11|ENSG00000172367|chr11:119188822-119188822|C/-|frameshift_variant'] 27216 23503 FLNMHCFILF True PC9_epitope_Rep5 1283.6195073513502 1283.6184099358602 95.386 2 -1.6022330693404976 0.42798880719602134 1.0 ['GPR20|p.S137F|1|0.24|ENSG00000204882|chr8:141357514-141357514|G/A|missense_variant'] 72654 22502 MMCRAAKA True NCI_RA007_Epitope_Rep5 880.4081346861199 880.40702993586 93.733 2 -1.6023029563853608 0.4279952872938191 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B'] 97230 5460 SDYSFSVIAMS True PC9_epitope_Rep5 1205.52744035797 1205.52634993586 26.012 2 -1.602503612418566 0.4280260549419428 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 93451 18431 RQHLLPAP True PC9_epitope_Rep2 930.5399345076999 930.53882993586 76.226 2 -1.6025271475382914 0.4280260549419428 1.0 ['ENST00000480594.1_1_2:65243695-65245227:+|nuORF'] 136296 19823 WSLSYIFFP True NCI_RA007_Epitope_Rep1 1158.57498260374 1158.57334490379 81.314 3 -1.60257384590428 0.4280260549419428 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 3941 8774 AHDEFPMLP True PC9_epitope_Rep2 1055.47461693947 1055.4735099358602 39.104 2 -1.6026689988980303 0.42802768558061555 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.D1231Tfs*9|1|0.27|ENSG00000163554|chr1:158648532-158648532|C/-|frameshift_variant', 'SPTA1|p.D1280Gfs*3|1|0.07|ENSG00000163554|chr1:158647598-158647599|-/T|frameshift_variant', 'SPTA1|p.T1344Pfs*5|1|0.22|ENSG00000163554|chr1:158645353-158645353|G/-|frameshift_variant', 'SPTA1|p.D1530Rfs*4|1|0.28|ENSG00000163554|chr1:158642831-158642832|-/T|frameshift_variant', 'SPTA1|p.K1686Lfs*14|1|0.06|ENSG00000163554|chr1:158638166-158638167|-/GAAGATAG|frameshift_variant', 'SPTA1|p.W1920*|1|0.3|ENSG00000163554|chr1:158626912-158626912|C/-|frameshift_variant', 'SPTA1|p.R1033K|1|0.14|ENSG00000163554|chr1:158653364-158653364|C/T|missense_variant'] 118743 23381 TYWKRLMKLL True PC9_epitope_Rep6 1350.7845985304998 1350.78295490379 103.04 3 -1.6027071087874003 0.42802768558061555 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 27105 17915 FLHGIRYFK True NCI_RA007_Epitope_Rep3 1179.6552986131098 1179.65365490379 78.503 3 -1.602735305643592 0.4280341647975713 1.0 ['ENST00000481107.1_1_17:15927314-15927548:+|nuORF'] 19621 12696 ELQRHARTH True PC9_epitope_Rep1 1146.6006372713 1146.59954993586 53.707 2 -1.602975848962745 0.42806008019754876 1.0 ['ENSG00000167182|ENST00000376741|SP2', 'nc|ENSG00000167182|Q02086-2|SP2'] 139230 19135 YLGKLRAP True NCI_RA007_Epitope_Rep5 916.5494365622399 916.54832993586 80.474 2 -1.6030045614901298 0.42806008019754876 1.0 ['ENSG00000148344|ENST00000340607|PTGES'] 125918 3368 VLCVAWQDYV True PC9_epitope_Rep2 1194.5743309807401 1194.57268490379 18.224 3 -1.6030257837215245 0.42806008019754876 1.0 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 133532 23986 VWRFPSVGVLA True PC9_epitope_Rep2 1229.6920780446499 1229.6909899358602 97.757 2 -1.6030313090729524 0.42806008019754876 1.0 ['ENST00000448173.5_1_7:72474205-72476389:-|nuORF', 'ENST00000423834.6_1_7:72474205-72476389:-|nuORF'] 79826 5992 PEGGFPPP True NCI_RA007_Epitope_Rep3 796.3755545211999 796.37444993586 30.548 2 -1.603127474498998 0.4281345219351404 1.0 ['ENST00000593068.6_2_19:1010069-1010321:-|nuORF', 'ENST00000592618.5_1_19:1009676-1010321:-|nuORF'] 125311 7335 VINVIRVTI True NCI_RA007_Epitope_Rep5 1025.6597152872098 1025.65860993586 34.892 2 -1.6032228874025676 0.42813614996885085 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 113110 15336 TLPAIKMAA True PC9_epitope_Rep5 914.52592423634 914.52482993586 64.0 2 -1.6032587757143113 0.42813614996885085 1.0 ['ENST00000449714.1_1_2:150444067-150444316:+|nuORF'] 30686 5362 GALDTHRR True PC9_epitope_Rep4 924.488961564 924.48786993586 27.344 2 -1.6033765224573584 0.4281458828859441 1.0 ['CON__Q32PI4'] 83945 10929 PVRKLFKKF True NCI_RA007_Epitope_Rep5 1161.7386343142498 1161.73699490379 48.678 3 -1.6034222795570783 0.4281458828859441 1.0 ['KCNH5|p.Q711K|1|0.3|ENSG00000140015|chr14:62708344-62708344|G/T|missense_variant'] 100317 18357 SKKDRVTVV True H1975_Epitope_Rep3 1030.61349337078 1030.6123899358602 76.946 2 -1.603457878393795 0.4281458828859441 1.0 ['ENSG00000163466|ENST00000315717|ARPC2', 'ARPC2|p.E155Q|1|0.1|ENSG00000163466|chr2:218239398-218239398|G/C|missense_variant'] 104481 19700 SQLRVRDSLR True NCI_RA007_Epitope_Rep1 1228.7000169594 1228.69890993586 80.818 2 -1.6034720744543143 0.4281458828859441 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 47591 12591 IVVPSVRTP True PC9_epitope_Rep5 966.58621599378 966.58510993586 53.431 2 -1.6034892228121822 0.4281458828859441 1.0 ['ENST00000373517.3_1_X:72434272-72434665:-|nuORF'] 53041 16983 KPLRPALRL True NCI_RA007_Epitope_Rep3 1062.7025831587 1062.70207496793 74.665 1 -1.6035232332331162 0.4281491381067796 1.0 ['ENST00000257527.8_2_5:156907479-156907653:-|nuORF'] 63731 13012 LNDSKWEDIHV True NCI_RA007_Epitope_Rep1 1354.6517293543002 1354.65062993586 54.605 2 -1.6035779881620562 0.4281491381067796 1.0 ['ENST00000493008.1_1_10:32096588-32098081:-|nuORF', 'nc|ENSG00000165322|Q8IWW6-3|ARHGAP12', 'nc|ENSG00000165322|Q8IWW6-2|ARHGAP12', 'nc|ENSG00000165322|Q8IWW6-4|ARHGAP12', 'ENSG00000165322|ENST00000344936|ARHGAP12'] 17909 10487 EIAEAYLGK True PC9_epitope_Rep4 992.5178616504398 992.51676993586 48.054 2 -1.603649103056907 0.4281491381067796 1.0 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 119689 6520 VAVNPKEI True PC9_epitope_Rep1 868.50181766348 868.50072993586 29.882 2 -1.6036889775463816 0.4281491381067796 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 122985 10451 VGIAYLGGV True H1975_Epitope_Rep1 847.4803539429099 847.47924993586 45.154 2 -1.603782527758124 0.4281589019998641 1.0 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17', 'ENST00000559976.1_1_15:100708871-100801709:-|nuORF', 'nc|ENSG00000140470|Q8TE56-2|ADAMTS17'] 29518 9625 FVGGLYGG True PC9_epitope_Rep5 768.3806399016398 768.37954993586 41.988 2 -1.6037872134322186 0.4281589019998641 1.0 ['ENST00000438179.1_1_10:17619435-17619498:+|nuORF'] 19288 23877 ELKNRRKKKKQ True H1975_Epitope_Rep2 1454.9157638124195 1454.91412490379 98.353 3 -1.6038314772747968 0.4281589019998641 1.0 ['SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.D586Tfs*55|1|0.06|ENSG00000136531|chr2:165323239-165323239|G/-|frameshift_variant'] 116835 13477 TVEMMPGP True H1975_Epitope_Rep1 860.3772113973198 860.3766649679301 56.956 1 -1.6039180797220327 0.4281589019998641 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 123419 9925 VGNFQRQL True PC9_epitope_Rep5 960.5141136826799 960.5130099358599 43.148 2 -1.6039194957775726 0.4281589019998641 1.0 ['ENSG00000144395|ENST00000389175|CCDC150', 'CCDC150|p.N680Tfs*24|1|0.23|ENSG00000144395|chr2:196719540-196719549|ACTGCAAAGT/-|frameshift_variant', 'ENST00000461825.1_1_2:197583226-197584436:+|nuORF', 'ENST00000463826.5_1_2:197584220-197590826:+|nuORF', 'ENST00000494389.5_1_2:197559796-197594150:+|nuORF', 'nc|ENSG00000144395|Q8NCX0-2|CCDC150'] 36044 12877 GVAAAGHA True NCI_RA007_Epitope_Rep4 652.3292730351201 652.32872496793 56.615 1 -1.6039238283679795 0.4281589019998641 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 33849 10143 GLPEVENLSK True H1975_Epitope_Rep3 1084.57643915572 1084.57534993586 44.059 2 -1.6040296841302628 0.4281589019998641 1.0 ['RB1|p.T497Hfs*22|1|0.84|ENSG00000139687|chr13:48380230-48380230|C/-|frameshift_variant', 'RB1|p.K616Ifs*37|1|0.26|ENSG00000139687|chr13:48456235-48456236|-/T|frameshift_variant', 'RB1|p.P786Sfs*9|1|0.28|ENSG00000139687|chr13:48465232-48465233|-/T|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1'] 76222 18936 NNVSLLLG True H1975_Epitope_Rep3 828.4705175352 828.46942993586 79.412 2 -1.6040935901643245 0.4281589019998641 1.0 ['ENST00000528984.5_1_11:46678586-46685654:+|nuORF'] 114165 21869 TPKQASAT True PC9_epitope_Rep2 802.4184819623399 802.41738993586 89.595 2 -1.6041620811014365 0.4281589019998641 1.0 ['BSN|p.G2876Dfs*18|1|0.14|ENSG00000164061|chr3:49658178-49658178|G/-|frameshift_variant', 'BSN|p.G3480Afs*7|1|0.72|ENSG00000164061|chr3:49662282-49662282|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 21975 9983 ESEPEVKED True NCI_RA007_Epitope_Rep5 1060.4560492395199 1060.4549499358602 45.042 2 -1.604231418265292 0.4281589019998641 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 19496 9323 ELPFDRVV True PC9_epitope_Rep3 973.5232813840499 973.52218993586 40.802 2 -1.6042450491156357 0.4281589019998641 1.0 ['nc|ENSG00000073150|Q96RD6-1|PANX2', 'ENSG00000073150|ENST00000395842|PANX2'] 29625 18072 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 77.576 3 -1.6043363051279387 0.4281589019998641 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 132346 17657 VTYTNRYI True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 80.557 2 -1.6043674628731068 0.4281767017337244 1.0 ['ENSG00000087338|ENST00000282570|GMCL1'] 122211 9208 VGAPGEGA True H1975_Epitope_Rep1 656.31295426464 656.3124049679301 40.326 1 -1.6045569631431182 0.4282139257850098 1.0 ['ENSG00000142409|ENST00000610935|ZNF787'] 10382 21965 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 95.247 2 -1.6045638273470753 0.4282139257850098 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 136253 10679 WRWRDFLRSFL True NCI_RA007_Epitope_Rep5 1580.8364508625598 1580.8353499358602 47.713 2 -1.6045891381566002 0.4282139257850098 1.0 ['ENST00000261441.9_2_1:114340169-114340280:-|nuORF'] 93670 24003 RQRRRRERDRK True H1975_Epitope_Rep1 1610.9414184799796 1610.94032993586 99.609 2 -1.604640182959383 0.4282139257850098 1.0 ['ENST00000452135.6_3_5:179707603-179719088:-|nuORF'] 116003 10739 TSLELWMH True H1975_Epitope_Rep3 1015.4797023199101 1015.47860993586 46.386 2 -1.6047805917647793 0.42824304737747987 1.0 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 62992 24897 LLPPALKIGLK True PC9_epitope_Rep2 1161.7849158003298 1161.78328490379 101.43 3 -1.604857482376954 0.42828996535090696 1.0 ['ENST00000269919.10_1_19:18475054-18475243:+|nuORF'] 78033 9746 NVSLTVTNMPP True NCI_RA007_Epitope_Rep2 1171.59070932087 1171.5896099358602 42.531 2 -1.604867652635235 0.42828996535090696 1.0 ['nc|ENSG00000164078|Q04912-5|MST1R', 'MST1R|p.S1019Rfs*41|1|0.23|ENSG00000164078|chr3:49895454-49895454|A/-|frameshift_variant', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R'] 27145 27028 FLKLLNWMRLL True H1975_Epitope_Rep2 1445.85809782393 1445.8564649037899 111.53 3 -1.6049257022669348 0.42830291226957745 1.0 ['ENST00000389693.3_1_11:36397601-36484283:+|nuORF'] 19158 7812 ELHKELVR True NCI_RA007_Epitope_Rep2 1022.5872786229398 1022.58618993586 35.016 2 -1.6049970085254675 0.42830291226957745 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 125138 24718 VIGIHIGV True PC9_epitope_Rep4 806.50142374066 806.50087496793 103.57 1 -1.605022863277097 0.4283045358817002 1.0 ['ENSG00000174498|ENST00000327987|IGDCC3'] 27110 15098 FLHLFEKNL True NCI_RA007_Epitope_Rep1 1159.6389798426299 1159.6378899358601 62.795 2 -1.6050485563672456 0.4283045358817002 1.0 ['GTPBP10|p.M310L|1|0.07|ENSG00000105793|chr7:90384918-90384918|A/C|missense_variant'] 5179 5896 ALLYRHWIEIV True PC9_epitope_Rep5 1411.7976057423498 1411.79596490379 27.672 3 -1.6051018295546062 0.42831100895617025 1.0 ['nc|ENSG00000115607|O95256-2|IL18RAP', 'ENSG00000115607|ENST00000687160|IL18RAP'] 122784 6546 VGGPFLPP True NCI_RA007_Epitope_Rep5 782.4326754744999 782.43212496793 31.842 1 -1.6051834773136802 0.428317481884058 1.0 ['ENST00000216252.3_1_22:41856152-41856401:-|nuORF'] 36856 9324 GVLKLTAL True H1975_Epitope_Rep2 813.53238951577 813.53128993586 40.826 2 -1.6056003029973465 0.4283692440076539 1.0 ['PPARA|p.M400Nfs*105|1|0.2|ENSG00000186951|chr22:46235165-46235166|-/A|frameshift_variant'] 116196 8954 TSWHHSDLLRK True H1975_Epitope_Rep1 1378.7105816431 1378.7094899358601 39.346 2 -1.605720929472133 0.42839836054437175 1.0 ['ENSG00000164151|ENST00000296564|ICE1'] 2139 5275 AELPFPPCCP True PC9_epitope_Rep1 1072.4721744113199 1072.4710699358602 25.134 2 -1.6057768501095282 0.4284048322633969 1.0 ['ENST00000439955.1_1_2:118593974-118594413:+|nuORF'] 86994 25129 QMAFQILLRKK True NCI_RA007_Epitope_Rep5 1374.8169612879394 1374.81532490379 104.16 3 -1.6058681565888682 0.4284177752618172 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 140422 14245 YRFRKRDKVL True PC9_epitope_Rep4 1379.8149871419898 1379.81388993586 62.699 2 -1.605894714777967 0.4284177752618172 1.0 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 124283 4305 VGTLSQLR True NCI_RA007_Epitope_Rep4 872.50796567308 872.50686993586 22.903 2 -1.6060099282484241 0.4284242465412223 1.0 ['ENST00000552943.5_1_16:704926-706047:+|nuORF', 'ENST00000420061.6_1_16:699416-706047:+|nuORF', 'ENST00000549648.5_1_16:699416-706047:+|nuORF'] 131921 18203 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.64047496793 76.827 1 -1.606112980992444 0.42844365950027735 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 62572 23618 LLKLVHGS True H1975_Epitope_Rep1 865.53853752537 865.53744993586 98.083 2 -1.6061725063419376 0.42844365950027735 1.0 ['nc|ENSG00000119523|Q9H553-2|ALG2'] 63627 23645 LMKLLKMESP True H1975_Epitope_Rep3 1188.66103781016 1188.6599499358601 98.631 2 -1.6061944337129213 0.42844365950027735 1.0 ['ENST00000320876.10_2_18:2666159-2666928:+|nuORF'] 35311 7026 GRMRYTYQQRQ True NCI_RA007_Epitope_Rep1 1485.72591443741 1485.72427490379 31.327 3 -1.6063245425571027 0.4284808621919328 1.0 ['nc|ENSG00000148719|Q9NXW2-2|DNAJB12', 'ENSG00000148719|ENST00000444643|DNAJB12'] 711 20966 AAVEPTWKC True PC9_epitope_Rep5 1003.47970231991 1003.47860993586 85.705 2 -1.6063372016099844 0.4284808621919328 1.0 ['ENST00000403491.7_1_1:61548275-61548326:+|nuORF'] 100522 7773 SLASVRTL True PC9_epitope_Rep1 845.49706663621 845.49596993586 34.72 2 -1.606338742980058 0.4284808621919328 1.0 ['ENSG00000184898|ENST00000331426|RBM43'] 63459 19398 LLWCLASRRR True NCI_RA007_Epitope_Rep5 1272.7237296094397 1272.7226299358601 81.5 2 -1.6063435830997785 0.4284808621919328 1.0 ['ENST00000316292.13_1_6:74229958-74230393:-|nuORF'] 135889 21329 WPLFWEQLCRR True NCI_RA007_Epitope_Rep1 1532.7710737246798 1532.7699699358602 87.282 2 -1.6063750030986037 0.42848733217107793 1.0 ['CUL9|p.R1307W|1|0.38|ENSG00000112659|chr6:43203486-43203486|C/T|missense_variant'] 60270 13784 LGRNFSVQWNK True NCI_RA007_Epitope_Rep1 1347.7047679866698 1347.70366993586 57.633 2 -1.606551748375389 0.42849218926873445 1.0 ['SI|p.Q933K|1|0.31|ENSG00000090402|chr3:165030807-165030807|G/T|missense_variant'] 52435 1472 KKRRNWKR True NCI_RA007_Epitope_Rep1 1170.7210271874999 1170.71938490379 7.7979 3 -1.6065665337390125 0.42849218926873445 1.0 ['ENST00000438017.5_1_3:42653847-42674179:-|nuORF'] 12463 16264 DIYLYNKP True H1975_Epitope_Rep1 1024.52294703088 1024.5223749679299 67.908 1 -1.6066383921331437 0.42849218926873445 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2'] 71281 5753 LYPWECFVF True PC9_epitope_Rep5 1202.5470536037399 1202.54539490379 27.123 3 -1.6066964589641584 0.42849218926873445 1.0 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'nc|ENSG00000240849|A5PLL7-2|PEDS1', 'ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 142259 5014 YWTNNDLY True PC9_epitope_Rep1 1087.46107505031 1087.45996993586 24.145 2 -1.606786091575543 0.42849218926873445 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 38691 8062 HGATRGGP True NCI_RA007_Epitope_Rep1 751.3725348294299 751.3719849679301 35.357 1 -1.606840454241859 0.42849218926873445 1.0 ['ENST00000565181.1_1_15:72766821-72767304:-|nuORF'] 130546 4854 VSRELSAHTG True PC9_epitope_Rep2 1055.53597132607 1055.5348699358601 24.041 2 -1.6068729746361885 0.4284986586069888 1.0 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3'] 48488 20494 KAGGGAGGS True PC9_epitope_Rep1 660.3191022742401 660.31855496793 83.642 1 -1.6069575310623285 0.42851160158460666 1.0 ['ENSG00000142408|ENST00000270458|CACNG8'] 64398 25439 LPLSLLKTA True PC9_epitope_Rep5 954.61136811246 954.61026993586 103.09 2 -1.6069957980384646 0.42851160158460666 1.0 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 94505 6824 RRRRRRWHWH True NCI_RA007_Epitope_Rep1 1600.89368044192 1600.8920249037901 30.55 3 -1.6070561768494904 0.42851160158460666 1.0 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 80433 22714 PGKPYILTV True PC9_epitope_Rep1 986.5800679841799 986.57896993586 92.174 2 -1.607113353537605 0.42851160158460666 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A'] 87108 9270 QNRWKRQNFHE True NCI_RA007_Epitope_Rep2 1541.7599914470095 1541.75888993586 40.668 2 -1.6071619968704276 0.42851160158460666 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 41476 3353 HYLEFEKTRYE True NCI_RA007_Epitope_Rep2 1513.7201432672898 1513.71850490379 17.703 3 -1.6071981385799912 0.42851160158460666 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 38628 22856 HFGFILLM True H1975_Epitope_Rep1 976.52044493308 976.51934993586 95.062 2 -1.6072712130568763 0.42851160158460666 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 31966 17967 GEPSHPPG True NCI_RA007_Epitope_Rep5 776.3453170220799 776.34420993586 75.897 2 -1.6072719860695335 0.42851160158460666 1.0 ['nc|ENSG00000106078|O75128-7|COBL', 'nc|ENSG00000106078|O75128-2|COBL', 'nc|ENSG00000106078|O75128-3|COBL', 'ENSG00000106078|ENST00000265136|COBL', 'nc|ENSG00000106078|O75128-6|COBL', 'ENST00000462395.1_1_7:51085250-51098638:-|nuORF'] 58113 10924 LEKIERTV True PC9_epitope_Rep1 986.5760452329 986.57494993586 46.905 2 -1.607276455339579 0.42851160158460666 1.0 ['ENST00000473479.5_1_2:242274588-242275589:+|nuORF'] 47638 23638 IWELKMWRFP True PC9_epitope_Rep2 1404.73764833808 1404.73600490379 96.395 3 -1.607373388353858 0.4285293884619303 1.0 ['ENST00000230538.11_1_6:112462098-112462671:-|nuORF'] 30337 11188 GAAPNIQG True NCI_RA007_Epitope_Rep2 726.36605246666 726.3655049679301 48.101 1 -1.6074667281294497 0.4285358565737052 1.0 ['ENST00000494735.1_1_7:142960709-142960961:+|nuORF'] 124097 12778 VGSNVPFL True H1975_Epitope_Rep3 831.4490538146299 831.44850496793 54.367 1 -1.607492302182677 0.4285439420519495 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B', 'CC2D2B|p.A87Vfs*6|1|0.09|ENSG00000188649|chr10:96012670-96012671|-/TTTATTTTTGC|frameshift_variant', 'CC2D2B|p.A87Nfs*19|1|0.09|ENSG00000188649|chr10:96012669-96012670|-/AACCAAT|frameshift_variant'] 16444 18283 EELDKNFP True PC9_epitope_Rep1 990.46582607758 990.46472993586 75.115 2 -1.607525287687723 0.4285439420519495 1.0 ['METTL21C|p.D175E|1|0.18|ENSG00000139780|chr13:102686301-102686301|G/T|missense_variant'] 25708 20241 FERRRKRSR True NCI_RA007_Epitope_Rep2 1289.75411822093 1289.75248490379 83.765 3 -1.6075274097768246 0.4285439420519495 1.0 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 92084 19006 RKVTEKNL True NCI_RA007_Epitope_Rep2 986.58727862294 986.58618993586 78.781 2 -1.6077553962246565 0.4285956811082439 1.0 ['ENST00000291598.11_1_19:56934583-56934625:+|nuORF'] 123634 16559 VGQGVQAA True NCI_RA007_Epitope_Rep4 728.3817025307999 728.38115496793 71.775 1 -1.607812267091137 0.42859729735847346 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 7749 23735 ASQKKQKLE True PC9_epitope_Rep1 1058.6084079903399 1058.60730993586 96.09 2 -1.607836384395423 0.42859729735847346 1.0 ['ENSG00000147378|ENST00000370350|FATE1'] 49325 11239 KERQEQRQRHE True H1975_Epitope_Rep3 1522.7712844066998 1522.7701899358601 48.334 2 -1.6078996491668236 0.4286037641892733 1.0 ['ENST00000394009.4_1_14:74486078-74489636:+|nuORF'] 123012 24709 VGIIGGGH True PC9_epitope_Rep1 708.39187329168 708.39132496793 99.931 1 -1.607974034155737 0.42861184672144137 1.0 ['nc|ENSG00000165555|Q6NXP6-2|NOXRED1', 'ENSG00000165555|ENST00000380835|NOXRED1'] 132812 16698 VVLATKTP True NCI_RA007_Epitope_Rep5 827.51165407119 827.51054993586 70.994 2 -1.6080134455307922 0.42861184672144137 1.0 ['ENSG00000090402|ENST00000264382|SI', 'SI|p.G318Vfs*10|1|0.64|ENSG00000090402|chr3:165062440-165062440|G/-|frameshift_variant'] 15359 10085 EAGNSLWKEHR True PC9_epitope_Rep3 1325.64764703337 1325.64654993586 43.746 2 -1.6080377121865765 0.42861184672144137 1.0 ['ENST00000519304.1_2_8:133771146-133772790:-|nuORF'] 3319 20688 AGGGRKGG True PC9_epitope_Rep2 658.3510711088599 658.35052496793 85.012 1 -1.6082559766532438 0.4286538787981667 1.0 ['ENST00000467713.5_1_3:9982844-9985032:+|nuORF'] 8971 24526 AVGHHISE True PC9_epitope_Rep3 848.4140652882401 848.41296993586 99.683 2 -1.608304745825774 0.4286538787981667 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 75970 19476 NLVAAFEQSL True PC9_epitope_Rep5 1090.56587447202 1090.56476993586 79.967 2 -1.6083506597854456 0.4286538787981667 1.0 ['nc|ENSG00000134369|Q8NEY1-6|NAV1', 'nc|ENSG00000134369|Q8NEY1-7|NAV1', 'nc|ENSG00000134369|Q8NEY1-4|NAV1', 'nc|ENSG00000134369|Q8NEY1-2|NAV1', 'nc|ENSG00000134369|Q8NEY1-3|NAV1', 'nc|ENSG00000134369|Q8NEY1|NAV1', 'ENSG00000134369|ENST00000685211|NAV1', 'ENST00000477118.2_3_1:201762910-201763243:+|nuORF', 'ENST00000469130.5_1_1:201751782-201763782:+|nuORF', 'nc|ENSG00000134369|Q8NEY1-5|NAV1'] 88363 21583 QSKNWIFIWL True PC9_epitope_Rep6 1333.7182927924898 1333.71664490379 95.895 3 -1.6084675492645752 0.4286603444763823 1.0 ['ENST00000360105.8_1_19:13136243-13184244:+|nuORF'] 80889 21197 PHVSRARG True H1975_Epitope_Rep2 878.48348226074 878.4823899358599 87.73 2 -1.6084977711038864 0.428666810008261 1.0 ['ENST00000230859.7_2_5:6755057-6755249:+|nuORF'] 123399 14495 VGMSRSGT True NCI_RA007_Epitope_Rep4 793.37523725137 793.3746849679301 63.112 1 -1.6085584228466068 0.4286845917074054 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A', 'KIF1A-C2orf54|2|fusion', 'KIF1A-C2orf54|1|fusion'] 137278 4760 YCRRWRYWEYW True NCI_RA007_Epitope_Rep1 1765.7936000744096 1765.79194490379 22.595 3 -1.6087136150448096 0.4287023730041078 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 8972 22406 AVGHHISE True PC9_epitope_Rep6 848.4140652882401 848.41296993586 99.166 2 -1.6088317034095114 0.42870883784089625 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 45011 10561 IPEEKVPVP True H1975_Epitope_Rep1 1006.5698972232998 1006.56880993586 45.575 2 -1.6090778198861326 0.4287540876019779 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 94160 23566 RRPDQRRA True PC9_epitope_Rep2 1053.59040694077 1053.58930993586 96.122 2 -1.6090986285112223 0.4287540876019779 1.0 ['ENST00000390551.6_1_14:106237055-106237666:-|nuORF'] 30687 6480 GALDTHRR True PC9_epitope_Rep5 924.488961564 924.48786993586 29.898 2 -1.6091081309642639 0.4287540876019779 1.0 ['CON__Q32PI4'] 36584 8107 GVHPAPGF True NCI_RA007_Epitope_Rep3 780.39187329168 780.39076993586 38.992 2 -1.6091722401546587 0.4287540876019779 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 95368 12543 RVWDTRTWDY True H1975_Epitope_Rep3 1396.6523980606398 1396.6513099358601 53.446 2 -1.6092464304839327 0.4287540876019779 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 36046 12958 GVAAAGHA True NCI_RA007_Epitope_Rep5 652.3292730351201 652.32872496793 56.523 1 -1.6092699644276 0.4287540876019779 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 34524 14639 GPQPPPHDP True PC9_epitope_Rep2 940.4402800360799 940.43918993586 61.577 2 -1.6092810327681382 0.4287540876019779 1.0 ['ENST00000562532.2_1_20:30584341-30584887:+|nuORF'] 124059 20231 VGSKPGMN True PC9_epitope_Rep1 788.38507365908 788.38396993586 82.649 2 -1.6094690177487712 0.42877670166545984 1.0 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 64199 18397 LPGKKHRGR True NCI_RA007_Epitope_Rep5 1047.6413798844699 1047.6402899358602 77.573 2 -1.6094860735013037 0.42877670166545984 1.0 ['nc|ENSG00000139973|Q17RD7-2|SYT16', 'ENSG00000139973|ENST00000683842|SYT16', 'SYT16|p.R559Vfs*33|1|0.57|ENSG00000139973|chr14:62100442-62100442|C/-|frameshift_variant'] 35588 5367 GTALLRSAA True PC9_epitope_Rep4 858.49231560894 858.49120993586 27.365 2 -1.6094868227766734 0.42877670166545984 1.0 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 103573 8164 SPSPKLRI True PC9_epitope_Rep3 896.5443511817999 896.54324993586 36.382 2 -1.6094997797543127 0.42877670166545984 1.0 ['ENST00000359451.6_1_6:110501026-110501203:-|nuORF', 'ENST00000392586.5_1_6:110499922-110501203:-|nuORF'] 60078 17012 LGLLNTKQL True PC9_epitope_Rep4 998.6124307416201 998.61132993586 73.429 2 -1.609526548477454 0.42877670166545984 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-4|RUSC1', 'nc|ENSG00000160753|Q9BVN2-2|RUSC1', 'ENST00000462780.5_1_1:155294998-155295718:+|nuORF', 'nc|ENSG00000160753|Q9BVN2-3|RUSC1'] 89036 18907 QVLEIHGV True PC9_epitope_Rep3 893.49706663621 893.49596993586 77.947 2 -1.6095480644567255 0.42877670166545984 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'ENST00000506361.5_1_3:123456168-123512688:-|nuORF'] 123684 13771 VGRAAPRWR True NCI_RA007_Epitope_Rep2 1067.6100797561899 1067.60898993586 58.214 2 -1.6096122411419604 0.42877670166545984 1.0 ['ENST00000372583.5_1_1:42050979-42094538:-|nuORF'] 99084 16919 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 71.84 2 -1.6096587180408737 0.42878316456412285 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 32388 7946 GFNQSSNLY True NCI_RA007_Epitope_Rep5 1028.45632402304 1028.4552299358602 37.254 2 -1.6097653288705533 0.4288009413255493 1.0 ['BCR|p.K924N|1|0.75|ENSG00000186716|chr22:23290403-23290403|G/T|missense_variant'] 102852 10981 SNYSVSLVGP True H1975_Epitope_Rep1 1021.5080252427299 1021.5074749679301 47.203 1 -1.6098394236578661 0.4288074038037268 1.0 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF', 'ENST00000509333.5_1_4:95376439-95494553:+|nuORF', 'ENST00000514830.5_1_4:95376439-95503710:+|nuORF', 'nc|ENSG00000163110|Q96HC4-5|PDLIM5', 'ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 42360 12115 IEARRRAH True PC9_epitope_Rep1 1007.5736942474698 1007.57258993586 51.462 2 -1.6100346770670992 0.42881547686389865 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 95396 22566 RWEPRLSSRPL True PC9_epitope_Rep1 1395.7735162528297 1395.7724099358602 91.607 2 -1.610056896022413 0.42881547686389865 1.0 ['ENST00000262376.10_1_16:4897931-4902890:+|nuORF', 'ENST00000592120.5_2_16:4897931-4898255:+|nuORF'] 74078 10455 NDNGNGKN True H1975_Epitope_Rep3 831.34710792723 831.34655496793 45.276 1 -1.6100639297499497 0.42881547686389865 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 81688 8447 PLLVKVKAQ True PC9_epitope_Rep1 994.65390163078 994.65280993586 37.328 2 -1.6102265096833022 0.4288284007602498 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 65216 23672 LQRQRAILYKR True PC9_epitope_Rep3 1443.87865002771 1443.87700490379 96.339 3 -1.6103587123444592 0.4288284007602498 1.0 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000485706.5_1_9:136216467-136216912:+|nuORF'] 60031 6520 LGKPGRIQ True PC9_epitope_Rep1 867.52903547083 867.52792993586 29.882 2 -1.6105188860381647 0.42885748871516977 1.0 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000566903.5_1_16:84212549-84216700:-|nuORF', 'ENST00000564208.5_1_16:84215181-84220577:-|nuORF', 'ENST00000537450.5_1_16:84215181-84219087:-|nuORF', 'ENST00000564774.5_1_16:84215181-84218621:-|nuORF', 'ENST00000544090.5_1_16:84215181-84217023:-|nuORF'] 14296 9209 DSVAWVPP True PC9_epitope_Rep1 869.4283183700499 869.4272299358599 40.272 2 -1.6105877328904923 0.4288719729445431 1.0 ['ENST00000530266.5_1_11:20388750-20388831:+|nuORF', 'ENST00000451739.6_2_11:20388750-20398162:+|nuORF'] 73681 4966 MYNPSANLP True PC9_epitope_Rep1 1005.4589668753299 1005.45786993586 23.961 2 -1.61060829978741 0.4288719729445431 1.0 ['ENSG00000130383|ENST00000588525|FUT5'] 95473 7168 RWLWWQPWWWK True H1975_Epitope_Rep1 1756.8779217517197 1756.87682993586 32.593 2 -1.6106684023270952 0.4288719729445431 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1'] 52614 24155 KLLQLYKMFL True PC9_epitope_Rep2 1295.7675514840298 1295.76589490379 98.438 3 -1.6108149141652863 0.4288719729445431 1.0 ['ENST00000495399.1_1_9:72435845-72472969:+|nuORF'] 27634 19999 FPDFYPNN True NCI_RA007_Epitope_Rep5 1012.42904664604 1012.4279499358599 83.843 2 -1.6108358819411024 0.4288719729445431 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 36834 11571 GVLGSSKVL True H1975_Epitope_Rep1 858.51746772762 858.51636993586 49.494 2 -1.6109313913583099 0.4288719729445431 1.0 ['nc|ENSG00000160216|Q9NRZ7-2|AGPAT3', 'ENSG00000160216|ENST00000291572|AGPAT3', 'nc|ENSG00000160216|Q9NRZ7-3|AGPAT3'] 41006 7428 HTGARGLP True NCI_RA007_Epitope_Rep2 807.4351350859899 807.4340299358599 33.52 2 -1.610986528331936 0.4288719729445431 1.0 ['COL1A2|p.Q212H|1|0.07|ENSG00000164692|chr7:94407888-94407888|A/C|missense_variant'] 5651 7207 APAAQLARAL True NCI_RA007_Epitope_Rep4 980.5767139392399 980.57560993586 34.354 2 -1.6109997720268212 0.4288719729445431 1.0 ['ENSG00000102109|ENST00000218230|PCSK1N'] 40349 24994 HQRFESRMS True PC9_epitope_Rep1 1176.54582481712 1176.54418490379 101.07 3 -1.6110225149060418 0.4288719729445431 1.0 ['MYO1B|p.H488R|1|0.18|ENSG00000128641|chr2:191385993-191385993|A/G|missense_variant'] 112073 11071 TITNARFVSP True PC9_epitope_Rep1 1104.5927579262 1104.5916699358602 47.473 2 -1.6110465307134954 0.4288719729445431 1.0 ['ENST00000435880.6_1_2:70189834-70190005:-|nuORF'] 98098 8429 SESDFRDKH True NCI_RA007_Epitope_Rep1 1119.49450043691 1119.4934099358602 36.789 2 -1.6110771890966251 0.4288719729445431 1.0 ['ENST00000355301.8_2_2:110920698-110922295:-|nuORF'] 120481 15076 VEEVGRLL True PC9_epitope_Rep3 913.5232813840498 913.52218993586 63.125 2 -1.6111280628293418 0.4288719729445431 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant', 'ENST00000430598.5_1_15:20613931-20667676:-|nuORF', 'ENST00000529624.5_3_15:28877823-28916776:+|nuORF', 'ENST00000428453.5_1_15:20588586-20667676:-|nuORF', 'nc|ENSG00000290376|Q9BVR0|HERC2P3', 'ENST00000529353.1_1_15:28878360-28886587:+|nuORF', 'ENST00000524476.5_1_15:28882105-28886289:+|nuORF', 'ENST00000562687.6_3_16:32769598-32772029:+|nuORF'] 58302 16665 LELWVNYYVRW True PC9_epitope_Rep2 1539.7874349814701 1539.78632993586 69.345 2 -1.6112021891485055 0.4288719729445431 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 61561 25415 LKILIHIGH True PC9_epitope_Rep5 1042.6651350208201 1042.66402993586 102.99 2 -1.6112454589171137 0.4288719729445431 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'KDR|p.P1105Mfs*9|1|0.13|ENSG00000128052|chr4:55089466-55089467|-/CCTTCTTCATT|frameshift_variant', 'KDR|p.P1233Lfs*2|1|0.16|ENSG00000128052|chr4:55082602-55082602|C/-|frameshift_variant'] 138453 9948 YHLRQEDSGKY True H1975_Epitope_Rep3 1394.6578773638998 1394.6567899358602 43.298 2 -1.6112487309466625 0.4288719729445431 1.0 ['IGSF3|p.K1161Rfs*33|1|0.26|ENSG00000143061|chr1:116577417-116577417|C/-|frameshift_variant', 'ENSG00000143061|ENST00000369486|IGSF3', 'nc|ENSG00000143061|O75054-2|IGSF3'] 141492 15979 YTKIFNDFK True PC9_epitope_Rep5 1174.60225998074 1174.60060490379 66.454 3 -1.6112850682073756 0.4288719729445431 1.0 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 65777 10281 LSDGTGAFY True H1975_Epitope_Rep2 929.4130622287298 929.41196993586 44.552 2 -1.6114663138060281 0.4288719729445431 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 93981 20178 RRKITQPRER True NCI_RA007_Epitope_Rep5 1338.79564867974 1338.79399490379 84.559 3 -1.6114844524908964 0.4288719729445431 1.0 ['LZTR1|p.A477P|1|0.3|ENSG00000099949|chr22:20993999-20993999|G/C|missense_variant'] 13674 5135 DPRLQEQPP True H1975_Epitope_Rep3 1078.5407223533398 1078.5396299358601 24.856 2 -1.6115445203851335 0.4288784327919287 1.0 ['ENST00000470037.1_1_1:26358781-26358883:+|nuORF'] 137360 9725 YDQIVFYVAIR True H1975_Epitope_Rep1 1385.73433677945 1385.7332299358602 42.334 2 -1.6115683932337055 0.4288848924931854 1.0 ['nc|ENSG00000186038|A5X5Y0-2|HTR3E', 'nc|ENSG00000186038|A5X5Y0-4|HTR3E', 'ENSG00000186038|ENST00000415389|HTR3E', 'nc|ENSG00000186038|A5X5Y0-3|HTR3E', 'nc|ENSG00000186038|A5X5Y0-6|HTR3E'] 66080 5842 LSEKCEEPQ True NCI_RA007_Epitope_Rep1 1061.46992548185 1061.4688299358602 26.777 2 -1.6117581339614213 0.4288978114573319 1.0 ['nc|ENSG00000113494|P16471-2|PRLR', 'ENSG00000113494|ENST00000618457|PRLR'] 109057 22345 TAKKKLMP True PC9_epitope_Rep1 915.5575587177898 915.55646993586 90.764 2 -1.6117704422249888 0.4288978114573319 1.0 ['ENSG00000138829|ENST00000262464|FBN2'] 99449 17482 SIAPKTTRVT True PC9_epitope_Rep1 1072.62405805448 1072.62296993586 72.04 2 -1.6118011217798405 0.4288994197948358 1.0 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 18329 10424 EISPRSGL True PC9_epitope_Rep5 857.46068112749 857.45958993586 45.082 2 -1.611805959200421 0.4288994197948358 1.0 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 104482 19102 SQLRVRDSLR True NCI_RA007_Epitope_Rep4 1228.7000169594 1228.69890993586 82.624 2 -1.6118373431962008 0.42890102805957997 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 19045 8174 ELFKKRAL True NCI_RA007_Epitope_Rep4 1003.6178504752298 1003.61674993586 38.23 2 -1.6119327325565207 0.42890102805957997 1.0 ['GTF2E2|p.D187Tfs*6|1|0.35|ENSG00000197265|chr8:30607141-30607141|C/-|frameshift_variant', 'ENSG00000197265|ENST00000355904|GTF2E2'] 126965 22441 VLRPCQHH True NCI_RA007_Epitope_Rep5 988.5025034531602 988.50140993586 93.488 2 -1.61225493739134 0.4289301063107894 1.0 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'ENSG00000059145|ENST00000389221|UNKL', 'nc|ENSG00000059145|Q9H9P5-2|UNKL', 'nc|ENSG00000059145|Q9H9P5-3|UNKL', 'nc|ENSG00000059145|Q9H9P5-1|UNKL'] 139660 9377 YMVMECGNIDL True H1975_Epitope_Rep2 1286.5345169676998 1286.5334099358602 41.031 2 -1.6124614238386183 0.4289688238553481 1.0 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK'] 120220 12546 VEARRHQRLQ True PC9_epitope_Rep4 1291.7221493863099 1291.72104993586 56.078 2 -1.6125492138266873 0.4289688238553481 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 104470 22639 SQLQRPPEA True PC9_epitope_Rep1 1024.5301576696397 1024.5290699358602 91.887 2 -1.6125699457190108 0.4289688238553481 1.0 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 79640 8947 PDNLWASKNYY True PC9_epitope_Rep5 1369.63026563373 1369.62862490379 39.357 3 -1.6127254970960219 0.4289688238553481 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 142291 14486 YYDDEKEKL True NCI_RA007_Epitope_Rep2 1201.5502839775297 1201.54918993586 61.009 2 -1.6127312045085238 0.4289688238553481 1.0 ['ENSG00000149257|ENST00000358171|SERPINH1'] 134533 17603 VYRDPGVLKQV True PC9_epitope_Rep5 1272.7190210684798 1272.7179299358602 72.719 2 -1.612745818616876 0.4289688238553481 1.0 ['ENST00000474814.1_1_1:28907601-28907664:-|nuORF'] 88 21273 AAAPLACFPRP True PC9_epitope_Rep3 1112.58008506752 1112.5789899358601 87.121 2 -1.6128563216977896 0.4289688238553481 1.0 ['ENST00000289431.9_1_20:48525049-48532037:-|nuORF'] 64578 11865 LPSKPLQDR True NCI_RA007_Epitope_Rep2 1052.5978433066398 1052.59674993586 50.754 2 -1.6129537840942572 0.4289688238553481 1.0 ['ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21'] 94681 18724 RRYKLQKQ True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.6661699358601 81.008 2 -1.6129748534151305 0.4289688238553481 1.0 ['ENST00000473916.1_1_6:30891971-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-2|VARS2', 'ENST00000469358.5_1_6:30889720-30893984:+|nuORF', 'ENST00000477288.5_1_6:30884740-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-3|VARS2', 'ENSG00000137411|ENST00000676266|VARS2', 'nc|ENSG00000137411|Q5ST30-4|VARS2'] 80963 1387 PIFPWYAFQL True PC9_epitope_Rep3 1280.65938093404 1280.65828993586 7.6444 2 -1.6130339871144863 0.4289688238553481 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 79097 6632 PALPARAPA True PC9_epitope_Rep3 862.50248636982 862.50138993586 30.533 2 -1.6130342992446725 0.4289688238553481 1.0 ['ENST00000504806.5_1_5:10564479-10564683:+|nuORF'] 117318 12744 TVNIWDLK True PC9_epitope_Rep1 987.5389314481899 987.53782993586 53.895 2 -1.613054344009973 0.4289688238553481 1.0 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 46308 12482 ISQIDSFHM True PC9_epitope_Rep4 1076.49608066004 1076.49498993586 55.818 2 -1.6130687337253387 0.4289688238553481 1.0 ['MROH2B|p.A1078D|1|0.3|ENSG00000171495|chr5:41009982-41009982|G/T|missense_variant'] 45455 17489 IQKPLRIHH True H1975_Epitope_Rep2 1140.68799572372 1140.68635490379 72.562 3 -1.6132323439458123 0.42898658886853475 1.0 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF'] 40904 11498 HSPLLQPGL True PC9_epitope_Rep2 960.53926580136 960.53816993586 49.55 2 -1.6133717051004777 0.429004353479957 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 124583 8101 VGVSTLSL True PC9_epitope_Rep1 774.44871946146 774.44762993586 35.987 2 -1.6134269200976834 0.42901402080506557 1.0 ['ENSG00000011114|ENST00000334746|BTBD7'] 91326 18279 RGRRHRLQYR True NCI_RA007_Epitope_Rep5 1396.80246539568 1396.80082490379 77.114 3 -1.6135070129374223 0.42901402080506557 1.0 ['ENSG00000105278|ENST00000262961|ZFR2'] 124280 21264 VGTLQSTK True PC9_epitope_Rep4 832.46543215476 832.4648849679301 89.961 1 -1.6135965620255892 0.42901402080506557 1.0 ['ENST00000583350.1_1_18:14377547-14378720:-|nuORF'] 38036 16987 HARRRPQRRWE True PC9_epitope_Rep5 1546.8453928368197 1546.8442899358602 70.358 2 -1.6136326042846458 0.42901402080506557 1.0 ['ENST00000261692.6_1_12:123751765-123756364:-|nuORF'] 20131 11244 ENAARTAW True NCI_RA007_Epitope_Rep2 917.4355290088099 917.4349849679301 48.323 1 -1.6137282530040145 0.42901402080506557 1.0 ['ENST00000332408.8_1_15:49255166-49255310:-|nuORF'] 130481 4278 VSPPTHGR True NCI_RA007_Epitope_Rep3 849.44569976969 849.44460993586 23.542 2 -1.6137647957247294 0.42902047692812156 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 60079 23521 LGLLSWRRS True PC9_epitope_Rep6 1086.62981214126 1086.6287099358601 103.61 2 -1.6137777940263263 0.4290269329051808 1.0 ['ENST00000471339.1_1_5:173036657-173043649:-|nuORF'] 128861 14820 VQDNPAMPTS True H1975_Epitope_Rep2 1058.47025983502 1058.46916993586 62.162 2 -1.61383847259036 0.4290333887362482 1.0 ['CASP1|p.E241Kfs*25|1|0.08|ENSG00000137752|chr11:105029806-105029806|C/-|frameshift_variant', 'nc|ENSG00000137752|P29466-2|CASP1', 'ENSG00000137752|ENST00000533400|CASP1', 'ENST00000526511.5_1_11:104901858-104905840:-|nuORF', 'nc|ENSG00000137752|P29466-4|CASP1', 'nc|ENSG00000137752|P29466-3|CASP1', 'ENST00000528424.1_1_11:104901858-104905058:-|nuORF'] 56357 13696 LDDLLPSLPSS True H1975_Epitope_Rep3 1155.60231955039 1155.6012299358601 57.975 2 -1.6138898614135744 0.4290365981887458 1.0 ['PTK2B|p.V924L|1|0.11|ENSG00000120899|chr8:27454567-27454567|G/T|missense_variant'] 141577 21231 YTPQVIHCRYV True H1975_Epitope_Rep1 1377.68634104121 1377.6852499358602 88.211 2 -1.6139439748957616 0.4290365981887458 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 77057 19188 NRKLIYNFK True NCI_RA007_Epitope_Rep4 1194.6873270173799 1194.68569490379 82.959 3 -1.6140491515607218 0.4290365981887458 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 108860 4686 TAAARLPPSV True H1975_Epitope_Rep2 981.5607295219299 981.55962993586 23.12 2 -1.6140703980070774 0.4290365981887458 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A'] 115952 24379 TSHGLRRHPS True PC9_epitope_Rep3 1146.6006372713 1146.59899490379 99.087 3 -1.6140799628782954 0.4290430535455861 1.0 ['nc|ENSG00000108021|Q5VWN6-2|TASOR2', 'ENSG00000108021|ENST00000695737|TASOR2'] 129012 24226 VQLLSLPFLP True H1975_Epitope_Rep3 1125.6797820254499 1125.6781349037901 100.92 3 -1.6141234049602284 0.42904947092339696 1.0 ['SLC2A9|p.D254G|1|0.22|ENSG00000109667|chr4:9941966-9941966|T/C|missense_variant', 'ENST00000505104.5_1_4:9882098-10027590:-|nuORF', 'nc|ENSG00000109667|Q9NRM0-2|SLC2A9', 'ENSG00000109667|ENST00000264784|SLC2A9'] 22618 9814 ETLSLLVIL True NCI_RA007_Epitope_Rep2 999.6215984429899 999.62050993586 42.797 2 -1.6141795618877013 0.42904947092339696 1.0 ['DDX3X|p.G117Afs*104|1|0.32|ENSG00000215301|chrX:41342559-41342559|G/-|frameshift_variant'] 105774 23034 SSHDASLH True H1975_Epitope_Rep2 852.3725943990801 852.37148993586 95.054 2 -1.6141937574744625 0.42904947092339696 1.0 ['nc|ENSG00000151718|Q6AWC2-4|WWC2', 'ENSG00000151718|ENST00000403733|WWC2', 'nc|ENSG00000151718|Q6AWC2-6|WWC2', 'nc|ENSG00000151718|Q6AWC2-5|WWC2', 'nc|ENSG00000151718|Q6AWC2-3|WWC2', 'nc|ENSG00000151718|Q6AWC2-2|WWC2'] 131724 20410 VTPELPKSL True PC9_epitope_Rep4 982.5698972232999 982.56880993586 86.653 2 -1.6142419428589792 0.42904947092339696 1.0 ['ENSG00000023516|ENST00000025301|AKAP11'] 53931 24131 KTQKKKKKKA True PC9_epitope_Rep4 1214.8186755401 1214.81756993586 101.31 2 -1.6143240126022944 0.42904947092339696 1.0 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4'] 125704 24333 VKQLQQQQ True PC9_epitope_Rep3 998.5508931142199 998.54978993586 98.91 2 -1.6143244602635392 0.42904947092339696 1.0 ['nc|ENSG00000172379|Q9HBZ2-2|ARNT2', 'ENSG00000172379|ENST00000303329|ARNT2'] 128376 20538 VPRHIRLP True PC9_epitope_Rep1 986.6137681542999 986.61321496793 83.814 1 -1.6143774971706741 0.42904947092339696 1.0 ['ENST00000372476.7_1_1:43773103-43773491:+|nuORF'] 40182 16553 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 68.896 3 -1.6144152650549854 0.42904947092339696 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 26973 6505 FLEEATEA True PC9_epitope_Rep1 908.4127278755599 908.41162993586 29.824 2 -1.6145196510021298 0.4290785353335519 1.0 ['ENST00000505030.5_1_5:87961954-87962140:-|nuORF'] 58211 16885 LELERLHPI True PC9_epitope_Rep1 1118.64479349906 1118.64368993586 69.773 2 -1.6148969801736461 0.4290978973547366 1.0 ['ENST00000610158.1_1_10:25242209-25242413:+|nuORF'] 22006 9937 ESHSQKSLFP True H1975_Epitope_Rep1 1158.56693710118 1158.5658499358601 43.158 2 -1.614902485129383 0.4290978973547366 1.0 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 868 12320 ADGGGGGS True NCI_RA007_Epitope_Rep1 576.21396849936 576.2134249679301 51.893 1 -1.6149681035377073 0.4290978973547366 1.0 ['ENSG00000228075|ENST00000585477|BOD1L2'] 117409 10258 TVPQRMWSHFW True H1975_Epitope_Rep3 1473.69757443125 1473.69646993586 44.506 2 -1.6150071793927832 0.42910435106996303 1.0 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 41884 19997 ICKPLHYKRIL True NCI_RA007_Epitope_Rep4 1382.82204666838 1382.8209499358602 86.479 2 -1.6150897106367104 0.42911725806269285 1.0 ['OR52I2|p.A218Hfs*13|1|0.27|ENSG00000226288|chr11:4587464-4587464|G/-|frameshift_variant', 'ENSG00000232268|ENST00000530443|OR52I1', 'ENSG00000226288|ENST00000641896|OR52I2', 'nc|ENSG00000226288|Q8NH67|OR52I2'] 77439 5748 NSNFPGTTKSV True PC9_epitope_Rep2 1150.56185172074 1150.56074993586 27.501 2 -1.615107164652892 0.42911725806269285 1.0 ['nc|ENSG00000148600|Q96JP9-2|CDHR1'] 10675 7313 CQFQFRFRRWN True NCI_RA007_Epitope_Rep3 1586.7677196797395 1586.76607490379 35.883 3 -1.6152521768702452 0.4291753800938224 1.0 ['ENSG00000115596|ENST00000233948|WNT6'] 102221 8396 SLSEELQN True PC9_epitope_Rep4 918.4294405688601 918.42834993586 39.757 2 -1.6152609497167714 0.4291753800938224 1.0 ['ENSG00000198870|ENST00000371957|STKLD1'] 139376 17675 YLMKILTQ True NCI_RA007_Epitope_Rep5 1008.5677890483198 1008.5672749679301 74.769 1 -1.6153413862764872 0.4292044401238894 1.0 ['ENST00000418987.2_1_9:103493819-103494230:+|nuORF'] 57877 25192 LEFLKVYEK True PC9_epitope_Rep1 1167.6539612004299 1167.65230490379 101.78 3 -1.6153671562540204 0.42921084160318285 1.0 ['ENSG00000165140|ENST00000375326|FBP1'] 142261 9849 YWWRFNYRQLY True H1975_Epitope_Rep3 1693.8153810648098 1693.8142899358602 42.914 2 -1.6154889505168262 0.42921084160318285 1.0 ['nc|ENSG00000076356|O75051-2|PLXNA2', 'ENST00000460870.1_1_1:208383501-208390355:-|nuORF'] 26301 25460 FHIRVRTA True PC9_epitope_Rep5 998.5773826455799 998.57628993586 103.17 2 -1.6156270190166977 0.42921084160318285 1.0 ['EPHA6|p.G737Efs*8|1|0.12|ENSG00000080224|chr3:97532366-97532366|G/-|frameshift_variant', 'nc|ENSG00000080224|Q9UF33|EPHA6', 'ENSG00000080224|ENST00000389672|EPHA6'] 83419 21139 PTLSDQILR True PC9_epitope_Rep5 1041.5818588893299 1041.5807699358602 86.37 2 -1.6156361707279185 0.42921084160318285 1.0 ['ATP8B4|p.R1101L|1|0.18|ENSG00000104043|chr15:49860471-49860471|C/A|missense_variant'] 39390 8200 HKKWFFYFFYF True NCI_RA007_Epitope_Rep2 1658.8074421500598 1658.80579490379 36.531 3 -1.615636407692426 0.42921084160318285 1.0 ['LPA|p.E5Kfs*10|1|0.21|ENSG00000198670|chr6:160664202-160664202|C/-|frameshift_variant'] 56491 7038 LDFDEFIPP True H1975_Epitope_Rep3 1091.51752729727 1091.51642993586 32.036 2 -1.615651182518995 0.42921084160318285 1.0 ['nc|ENSG00000104059|O60320-2|ENTREP2', 'ENSG00000104059|ENST00000261275|ENTREP2'] 72602 3844 MLSSQDVV True PC9_epitope_Rep5 877.42151873745 877.4204299358599 19.868 2 -1.6156949014122226 0.42921084160318285 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 26780 3186 FKMCLNYEVR True H1975_Epitope_Rep1 1301.62604928377 1301.62441490379 16.195 3 -1.6157540281852396 0.42921084160318285 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC', 'ENST00000358378.6_11:1212786-1216326:+|nuORF'] 95367 12672 RVWDTRTWDY True H1975_Epitope_Rep2 1396.6523980606398 1396.6513099358601 53.842 2 -1.61590480514725 0.42921564195298373 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 21644 15325 ERRYRERKLQY True H1975_Epitope_Rep3 1595.8644565155496 1595.86334993586 64.357 2 -1.6159133527059804 0.42921564195298373 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 74076 11051 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 47.539 1 -1.6159416711415542 0.42921564195298373 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 86815 6511 QLPPGSGP True PC9_epitope_Rep6 751.38645355807 751.38534993586 33.712 2 -1.6160003369463745 0.42921564195298373 1.0 ['ENST00000463814.1_1_7:143815556-143816108:-|nuORF'] 107390 23408 SVLLKNVRH True PC9_epitope_Rep6 1064.6454622054 1064.6443699358601 103.15 2 -1.6160067845713264 0.42921564195298373 1.0 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 10346 21262 CFVEFGAGK True NCI_RA007_Epitope_Rep5 956.4425885351998 956.44148993586 88.828 2 -1.61603160806493 0.42921564195298373 1.0 ['ENST00000482437.5_1_1:100606401-100609704:+|nuORF', 'ENSG00000122435|ENST00000370141|TRMT13'] 56237 22792 LCLVPDELRAP True PC9_epitope_Rep1 1224.6536439306 1224.6520049037902 92.48 3 -1.6163942986571025 0.4293125077700297 1.0 ['ENST00000317568.9_1_11:65179968-65180214:+|nuORF'] 116238 19773 TTDFAM[Oxidation]QNVL True H1975_Epitope_Rep2 1154.52777509158 1154.5266699358601 82.031 2 -1.6164580978962795 0.42932540714035466 1.0 ['ENSG00000141101|ENST00000268802|NOB1'] 10644 4295 CPKLQLWEWRN True H1975_Epitope_Rep1 1471.7394392432298 1471.73779490379 21.504 3 -1.6164652907775232 0.42932540714035466 1.0 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 58300 11010 LELWVNYYVRW True NCI_RA007_Epitope_Rep4 1539.7874349814701 1539.78632993586 49.217 2 -1.6165240959303349 0.4293318566068442 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 30872 13015 GAPPSHPA True H1975_Epitope_Rep1 732.35548778296 732.35493496793 55.146 1 -1.616597268906387 0.42934960727806976 1.0 ['ENST00000525371.1_1_8:145542007-145542573:-|nuORF'] 130507 8372 VSQDRKVP True H1975_Epitope_Rep2 927.5137793295098 927.51268993586 37.156 2 -1.6166190986689362 0.42935439762235705 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 24189 5996 EYQREGIPW True H1975_Epitope_Rep3 1176.5563724174797 1176.55526993586 28.076 2 -1.6167063730467057 0.42935439762235705 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 104138 8969 SQEMNTLFRFW True PC9_epitope_Rep1 1457.6761702803296 1457.6750699358602 39.344 2 -1.6168480143271313 0.42935439762235705 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 116195 8863 TSWHHSDLLRK True H1975_Epitope_Rep1 1378.7105816431 1378.7094899358601 39.004 2 -1.6169242670636974 0.42935439762235705 1.0 ['ENSG00000164151|ENST00000296564|ICE1'] 93661 12738 RQRRATPPA True NCI_RA007_Epitope_Rep2 1051.5999089953098 1051.5988099358601 54.165 2 -1.6169875517815433 0.42935439762235705 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 30307 6537 GAAIASHIGI True PC9_epitope_Rep3 908.50796567308 908.50686993586 30.171 2 -1.6169951267631284 0.42935439762235705 1.0 ['ENST00000560923.5_1_15:58283776-58287296:-|nuORF', 'ALDH1A2|p.S331*|1|0.21|ENSG00000128918|chr15:57963972-57963979|ATAGATGG/-|frameshift_variant', 'nc|ENSG00000128918|O94788-4|ALDH1A2', 'nc|ENSG00000128918|O94788-3|ALDH1A2', 'ENSG00000128918|ENST00000249750|ALDH1A2'] 139631 12300 YMHDHYLDKYE True H1975_Epitope_Rep2 1512.6343650379997 1512.6332699358602 52.396 2 -1.617265241434739 0.42936889089779084 1.0 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENSG00000198108|ENST00000305031|CHSY3'] 109773 5430 TEDWCNTLM True H1975_Epitope_Rep3 1111.43143179815 1111.43032993586 25.945 2 -1.617281860619471 0.42936889089779084 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN'] 119116 11053 VAGWYLEH True NCI_RA007_Epitope_Rep2 973.4657665079299 973.46466993586 47.59 2 -1.617333965929785 0.42936889089779084 1.0 ['ENSG00000141385|ENST00000269143|AFG3L2', 'ENST00000588893.1_1_18:12344091-12348281:-|nuORF'] 99430 9824 SIADKRVE True PC9_epitope_Rep1 916.4977949121999 916.49668993586 42.649 2 -1.6173596599170712 0.42936889089779084 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 119120 14041 VAHHGENPVSC True H1975_Epitope_Rep2 1148.5032912988 1148.50218993586 59.16 2 -1.6175137365809014 0.429393086771303 1.0 ['ENSG00000125686|ENST00000300651|MED1', 'MED1|p.S423Tfs*8|1|0.27|ENSG00000125686|chr17:39419746-39419746|C/-|frameshift_variant', 'nc|ENSG00000125686|Q15648-3|MED1'] 116968 8561 TVGLGHGGPQD True H1975_Epitope_Rep2 1036.49377216092 1036.49266993586 37.883 2 -1.6175359052618143 0.429393086771303 1.0 ['ENST00000562435.5_1_16:47165930-47177876:-|nuORF'] 93648 9706 RQRGHLMP True NCI_RA007_Epitope_Rep4 993.5290525541699 993.52794993586 44.179 2 -1.617725026385504 0.42941887662286304 1.0 ['PRLHR|p.H360Qfs*47|1|0.46|ENSG00000119973|chr10:118594165-118594166|-/T|frameshift_variant'] 36749 15492 GVKHHSGG True NCI_RA007_Epitope_Rep3 777.3881848935699 777.38763496793 68.497 1 -1.617812945397856 0.42941887662286304 1.0 ['ENSG00000104356|ENST00000401707|POP1', 'POP1|p.V293Cfs*5|1|0.23|ENSG00000104356|chr8:98134523-98134523|T/-|frameshift_variant'] 81022 16613 PILVMKFI True NCI_RA007_Epitope_Rep3 959.58779621691 959.58724496793 73.13 1 -1.617832423798023 0.42941887662286304 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 14828 11090 DVSVSQGFRML True H1975_Epitope_Rep1 1237.6125073946098 1237.6114099358601 47.621 2 -1.6178497522956976 0.42941887662286304 1.0 ['ENSG00000187546|ENST00000342526|AGMO', 'AGMO|p.T202Rfs*5|1|0.11|ENSG00000187546|chr7:15418561-15418562|TG/-|frameshift_variant'] 63233 20022 LLSHQEFWAQL True PC9_epitope_Rep5 1370.6982856239 1370.69718993586 82.066 2 -1.6179176035447806 0.42942047162243085 1.0 ['ENSG00000187037|ENST00000334425|GPR141'] 105759 24423 SSGGGGGG True H1975_Epitope_Rep1 534.2034038156601 534.2028549679301 101.25 1 -1.6179243478495482 0.42942047162243085 1.0 ['ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000133265|ENST00000433386|HSPBP1', 'nc|ENSG00000133265|Q9NZL4-2|HSPBP1', 'ENST00000369842.8_1_X:153609605-153609698:+|nuORF', 'KRT9|p.G138Efs*8|1|0.15|ENSG00000171403|chr17:41571580-41571581|-/T|frameshift_variant', 'ENST00000545606.5_1_12:67663381-67663543:+|nuORF', 'ENST00000532700.2_16:18911356-18937378:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000511242.1_1_5:112783941-112824318:-|nuORF', 'ENSG00000171444|ENST00000408903|MCC', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000157106|ENST00000446231|SMG1', 'MN1|p.Q1193Rfs*19|1|0.47|ENSG00000169184|chr22:27796968-27796968|C/-|frameshift_variant', 'ENSG00000169184|ENST00000302326|MN1', 'ENSG00000171403|ENST00000246662|KRT9', 'ENSG00000179168|ENST00000334928|GGN', 'nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENSG00000203782|ENST00000368742|LORICRIN', 'ENSG00000206557|ENST00000383763|TRIM71', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000136807|P50750-2|CDK9'] 139371 24490 YLLVRRVLH True H1975_Epitope_Rep1 1167.72404687927 1167.72241490379 101.5 3 -1.618046288913611 0.4294269185573533 1.0 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 14794 5946 DVQALFLCCI True PC9_epitope_Rep2 1123.54058832431 1123.53895490379 28.262 3 -1.6181337719224431 0.4294380118610562 1.0 ['ENST00000333039.2_2_22:39215633-39216080:-|nuORF'] 3564 10007 AGLVPALQW True NCI_RA007_Epitope_Rep5 953.5334521449299 953.53234993586 45.134 2 -1.6181769880920838 0.4294380118610562 1.0 ['ENST00000470417.1_1_2:121010459-121047172:+|nuORF'] 129059 23218 VQNSLLAL True PC9_epitope_Rep4 856.5018176634799 856.50072993586 97.539 2 -1.6183193802118003 0.4294380118610562 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 65497 19303 LRLQLEKLLES True NCI_RA007_Epitope_Rep3 1340.8027506924398 1340.80111490379 84.275 3 -1.6185445364789428 0.4294380118610562 1.0 ['ENSG00000153208|ENST00000295408|MERTK'] 27093 20213 FLGTAKLYRL True PC9_epitope_Rep3 1180.6968290719199 1180.69572993586 83.008 2 -1.6186714480436444 0.4294380118610562 1.0 ['ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 125626 24637 VKKPLAAA True NCI_RA007_Epitope_Rep2 796.5170738047999 796.5165249679301 103.57 1 -1.6187042138305092 0.4294380118610562 1.0 ['MYL1|p.V11L|1|0.27|ENSG00000168530|chr2:210315012-210315012|C/A|missense_variant'] 110866 19189 TGRRRRSL True NCI_RA007_Epitope_Rep4 1000.6002433484798 1000.5991499358599 82.962 2 -1.6187162930444168 0.4294380118610562 1.0 ['ENSG00000186806|ENST00000335624|VSIG10L', 'nc|ENSG00000186806|Q86VR7-2|VSIG10L'] 62316 4220 LLGDPKKRMRY True PC9_epitope_Rep2 1375.77582475195 1375.77418490379 21.559 3 -1.6187651898736912 0.4294380118610562 1.0 ['ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000177301|P16389-2|KCNA2'] 123484 12552 VGPEPERL True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 53.281 2 -1.6187728984419298 0.4294380118610562 1.0 ['ENST00000360612.4_1_22:50357538-50357607:+|nuORF'] 140066 18662 YQIVLLYIICI True H1975_Epitope_Rep2 1352.7777818145598 1352.77668993586 77.455 2 -1.6187760229639956 0.4294380118610562 1.0 ['ENST00000553612.5_1_14:81644196-81644316:-|nuORF'] 88362 23513 QSKNWIFIWL True PC9_epitope_Rep2 1333.7182927924898 1333.71664490379 95.915 3 -1.618784740130314 0.4294380118610562 1.0 ['ENST00000360105.8_1_19:13136243-13184244:+|nuORF'] 99663 22037 SIGIEEVF True PC9_epitope_Rep1 892.4541987647199 892.45310993586 89.579 2 -1.6187946759105987 0.4294380118610562 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'HYDIN|p.I1870Kfs*10|1|0.33|ENSG00000157423|chr16:70970523-70970530|TTCTTCTA/-|frameshift_variant', 'HYDIN|p.Q2268Rfs*6|1|0.09|ENSG00000157423|chr16:70941687-70941687|G/-|frameshift_variant', 'HYDIN|p.R2422Gfs*41|1|0.09|ENSG00000157423|chr16:70921112-70921112|T/-|frameshift_variant'] 72090 18018 MFCFLIFLQ True H1975_Epitope_Rep1 1160.5762455570398 1160.57514993586 75.078 2 -1.6188093451275445 0.4294380118610562 1.0 ['ENST00000503234.5_1_3:126746482-126752857:+|nuORF'] 131804 20595 VTQGPLPP True PC9_epitope_Rep3 807.4490538146299 807.44794993586 84.487 2 -1.6188467340579011 0.4294380118610562 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2'] 86236 9224 QILLPLEERV True NCI_RA007_Epitope_Rep5 1208.7128730588802 1208.71123490379 42.13 3 -1.6188790253157523 0.4294380118610562 1.0 ['TCERG1L|p.M585*|1|0.24|ENSG00000176769|chr10:131093170-131093170|T/-|frameshift_variant', 'ENSG00000176769|ENST00000368642|TCERG1L', 'ENST00000483040.1_1_10:132891427-132954311:-|nuORF'] 123736 8089 VGRGNYEELEN True PC9_epitope_Rep1 1278.5840437173 1278.5829499358601 35.938 2 -1.6189576017347436 0.4294380118610562 1.0 ['ENSG00000170006|ENST00000304385|TMEM154'] 63534 1166 LMACLRIARAH True H1975_Epitope_Rep1 1253.6849015725702 1253.6832449037902 6.1035 3 -1.6190337340875747 0.4294380118610562 1.0 ['nc|ENSG00000115970|Q6YHU6-6|THADA', 'nc|ENSG00000115970|Q6YHU6-5|THADA', 'nc|ENSG00000115970|Q6YHU6-3|THADA', 'ENSG00000115970|ENST00000405975|THADA', 'ENST00000408045.7_1_2:43571220-43805671:-|nuORF', 'nc|ENSG00000115970|Q6YHU6-2|THADA'] 78519 24300 NYPFINIRS True PC9_epitope_Rep4 1122.5821932425 1122.58054490379 101.95 3 -1.6190562075776593 0.4294380118610562 1.0 ['nc|ENSG00000117036|P41162-2|ETV3', 'ENSG00000117036|ENST00000368192|ETV3'] 34018 10332 GLTWQHGLFF True PC9_epitope_Rep5 1204.6029286870796 1204.60182993586 44.727 2 -1.6190801417990648 0.4294380118610562 1.0 ['L1PA4_dup9334|chr12:12409221-12411354:-|1.3393414808808248|0.0111968938891953|6.9|450.0|129|3|anti-sense'] 118112 16497 TYHMWWVCFWH True H1975_Epitope_Rep1 1594.66383177482 1594.6627299358602 68.827 2 -1.6191371685942408 0.4294380118610562 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 64446 9083 LPPFPGAA True NCI_RA007_Epitope_Rep2 768.4170254103599 768.41592993586 39.936 2 -1.6191406747182722 0.4294380118610562 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 82163 11446 PNLTVYKKE True NCI_RA007_Epitope_Rep4 1090.60225998074 1090.60116993586 50.955 2 -1.6192682570773638 0.42946704922847523 1.0 ['ENST00000492313.1_1_6:46133055-46135279:-|nuORF', 'ENSG00000112796|ENST00000371383|ENPP5'] 93193 14215 RPPPGGKG True PC9_epitope_Rep2 764.42932142956 764.42877496793 59.945 1 -1.619289129825184 0.4294799385505151 1.0 ['ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 33812 9282 GLLSFEESQR True NCI_RA007_Epitope_Rep1 1164.57750178488 1164.57640993586 40.1 2 -1.619308491328091 0.4294799385505151 1.0 ['ENSG00000041802|ENST00000265245|LSG1'] 83359 10537 PTGDPQYLT True NCI_RA007_Epitope_Rep4 990.4658260775801 990.4652749679301 47.377 1 -1.6194102584483927 0.4294863829931435 1.0 ['ENSG00000105364|ENST00000253099|MRPL4', 'nc|ENSG00000105364|Q9BYD3-2|MRPL4'] 124053 14459 VGSKCLWTYEI True NCI_RA007_Epitope_Rep2 1297.63765951329 1297.63656993586 60.905 2 -1.6194253744024294 0.4294928272901841 1.0 ['nc|ENSG00000127415|P35475-2|IDUA', 'ENSG00000127415|ENST00000514224|IDUA'] 13030 10811 DLNMESRPV True PC9_epitope_Rep4 1059.50189431647 1059.5007899358602 49.344 2 -1.6197699568252244 0.4295508968508562 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D'] 60162 10994 LGNSIMVLLIY True H1975_Epitope_Rep1 1234.6995314938601 1234.69842993586 47.251 2 -1.619824402179022 0.4295508968508562 1.0 ['OR2M7|p.M40L|1|0.1|ENSG00000177186|chr1:248324451-248324451|T/A|missense_variant'] 28642 8369 FSLLQPVP True H1975_Epitope_Rep3 899.5116540711899 899.51054993586 37.174 2 -1.6198446609931996 0.4295573402008291 1.0 ['ENST00000267102.12_1_12:49498261-49498554:-|nuORF'] 104455 23647 SQLLLPLPAC True PC9_epitope_Rep1 1053.58925276889 1053.5881499358602 95.747 2 -1.619990739261299 0.42955893149601854 1.0 ['ENST00000519574.1_1_2:219125758-219128073:+|nuORF'] 109963 14248 TEHGVEVV True H1975_Epitope_Rep2 868.42904664604 868.4279499358599 59.954 2 -1.6199940406219966 0.42955893149601854 1.0 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-3|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 98966 20924 SHASRHPRIS True H1975_Epitope_Rep2 1146.6006372713 1146.59899490379 86.623 3 -1.6201001851450658 0.4295621138707236 1.0 ['ENSG00000128594|ENST00000249363|LRRC4'] 116796 10066 TVEDFNRAL True PC9_epitope_Rep6 1063.52982331647 1063.5287299358602 49.31 2 -1.6201655224374143 0.4295621138707236 1.0 ['TAF6L|p.R593Pfs*8|1|0.26|ENSG00000162227|chr11:62787205-62787205|G/-|frameshift_variant', 'ENSG00000162227|ENST00000294168|TAF6L', 'ENST00000532915.1_1_11:62538888-62545815:+|nuORF', 'ENST00000524976.5_1_11:62538888-62549806:+|nuORF'] 36538 21187 GVGSHAAA True PC9_epitope_Rep6 668.32418765468 668.32363496793 94.344 1 -1.62017204084274 0.4295621138707236 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 100 5066 AAAQGVKR True PC9_epitope_Rep6 799.46643521427 799.46532993586 27.133 2 -1.6202497729707128 0.4295621138707236 1.0 ['ENST00000392161.3_1_19:36900716-36909439:-|nuORF'] 41842 9552 IAVVSPYNLQ True H1975_Epitope_Rep3 1102.60225998074 1102.60116993586 41.75 2 -1.620319018903077 0.42956855658459453 1.0 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 118884 10842 VADATAIKQHV True H1975_Epitope_Rep1 1151.62987171091 1151.6287699358602 46.665 2 -1.6205473245946689 0.42957014750062117 1.0 ['ENSG00000172421|ENST00000305286|EFCAB3', 'nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 62573 19520 LLKMEVEQLK True PC9_epitope_Rep5 1229.70534515029 1229.7042499358602 80.138 2 -1.620547950490348 0.42957014750062117 1.0 ['ENSG00000167083|ENST00000507680|GNGT2'] 34407 22223 GPHFLLCP True PC9_epitope_Rep4 882.4421946123799 882.44108993586 93.719 2 -1.6206370466491604 0.4295830321647994 1.0 ['ENST00000360001.10_1_1:1164082-1164292:-|nuORF'] 97220 5213 SDYSFSVIAMS True PC9_epitope_Rep3 1205.52744035797 1205.52634993586 25.133 2 -1.6206660143705531 0.4295830321647994 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 75679 12516 NLIAHNRTHTG True PC9_epitope_Rep5 1232.63741670284 1232.63578490379 53.142 3 -1.6207408013044937 0.42958454259031315 1.0 ['ENSG00000122386|ENST00000219091|ZNF205'] 81328 19116 PLALVVFCSL True PC9_epitope_Rep4 1060.5990891766 1060.5979899358601 81.622 2 -1.6207470977688112 0.42958454259031315 1.0 ['GPR35|p.V186L|1|0.24|ENSG00000178623|chr2:240630508-240630508|G/T|missense_variant'] 52861 9387 KPFAIEGYGI True PC9_epitope_Rep2 1093.5807962601698 1093.5796899358602 41.443 2 -1.6207769918088197 0.42958454259031315 1.0 ['ENSG00000116032|ENST00000234389|GRIN3B', 'ENSG00000198785|ENST00000361820|GRIN3A'] 61827 11875 LLAVGRVT True PC9_epitope_Rep5 827.5228874612301 827.5217899358599 50.675 2 -1.620794167723017 0.42958454259031315 1.0 ['ENST00000528796.5_1_11:3400300-3400357:-|nuORF'] 85395 16573 QEVKGVKR True NCI_RA007_Epitope_Rep3 942.5610638750998 942.55996993586 72.977 2 -1.6207957072890102 0.42958454259031315 1.0 ['ENSG00000196872|ENST00000397899|CRACDL'] 15190 5182 EACCKFLMK True PC9_epitope_Rep1 1071.49152995691 1071.4904299358602 24.784 2 -1.6208588346894388 0.42958454259031315 1.0 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5', 'KLHL5|p.A604Qfs*3|1|0.24|ENSG00000109790|chr4:39107714-39107714|G/-|frameshift_variant'] 123255 16126 VGLKFMQV True NCI_RA007_Epitope_Rep3 920.51535955264 920.5148149679301 71.133 1 -1.6208618600231437 0.42958454259031315 1.0 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF'] 68454 23784 LTFAWLRRYIK True PC9_epitope_Rep5 1465.85578932481 1465.85413490379 96.467 3 -1.620935736180122 0.42958454259031315 1.0 ['ENSG00000156502|ENST00000359655|SUPV3L1'] 132933 14116 VVNGGVPWP True PC9_epitope_Rep1 923.4865019525099 923.48540993586 59.125 2 -1.6209939507447564 0.42958454259031315 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 110697 9288 TGEAAGGAGEA True H1975_Epitope_Rep2 889.3777393491698 889.3771949679301 40.684 1 -1.621290161035589 0.42960386647996746 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENSG00000197978|ENST00000618348|GOLGA6L9', 'nc|ENSG00000197978|A6NEM1-2|GOLGA6L9'] 52624 13039 KLPALRLLFEK True NCI_RA007_Epitope_Rep4 1326.8387422783396 1326.83710490379 57.256 3 -1.6212934928381944 0.42960386647996746 1.0 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25'] 38619 7632 HFFEDYFFHKR True NCI_RA007_Epitope_Rep2 1571.73098273451 1571.72988993586 34.311 2 -1.6212987788436732 0.42960386647996746 1.0 ['ENSG00000172421|ENST00000305286|EFCAB3', 'nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 37402 15919 GVSVRRVG True PC9_epitope_Rep3 828.4929843152798 828.49188993586 66.379 2 -1.621340422332351 0.42961030748557427 1.0 ['ENST00000469804.1_1_3:160282329-160283148:-|nuORF'] 30887 11272 GAPRGPCK True H1975_Epitope_Rep1 784.4013924295599 784.4008449679301 48.335 1 -1.621424800801951 0.42961833785004516 1.0 ['ENST00000491277.1_1_1:214706738-214724618:-|nuORF', 'ENST00000486173.1_1_1:214638231-214725660:-|nuORF'] 101087 10113 SLGHPVPK True PC9_epitope_Rep3 833.47593726881 833.47484993586 43.85 2 -1.621426510915529 0.42961833785004516 1.0 ['ENSG00000153896|ENST00000329285|ZNF599', 'nc|ENSG00000153896|Q96NL3-2|ZNF599'] 76651 20485 NQSDHTST True NCI_RA007_Epitope_Rep4 888.3573382577601 888.35624993586 88.706 2 -1.6214694071633138 0.42961833785004516 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 3346 16856 AGGPDRPRSRL True NCI_RA007_Epitope_Rep1 1180.6425020832799 1180.6419749679299 69.696 1 -1.621577907424395 0.4296473617054911 1.0 ['ENST00000481848.6_2_6:127837311-127837734:-|nuORF'] 20141 9122 ENDIQLYQSQ True H1975_Epitope_Rep2 1236.5622456435601 1236.5611499358602 40.04 2 -1.6216033771130867 0.4296488653042791 1.0 ['ENSG00000138778|ENST00000265148|CENPE', 'nc|ENSG00000138778|Q02224-3|CENPE'] 103076 22740 SPGNLYIPVF True H1975_Epitope_Rep1 1105.58079626017 1105.5796899358602 94.583 2 -1.6216710506076375 0.4296488653042791 1.0 ['ENSG00000124574|ENST00000372530|ABCC10', 'nc|ENSG00000124574|Q5T3U5-2|ABCC10'] 126921 14637 VLQVSLQRV True NCI_RA007_Epitope_Rep5 1040.6342288153598 1040.63312993586 62.969 2 -1.621676059029604 0.4296488653042791 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 32851 24686 GHPASSWQ True H1975_Epitope_Rep3 868.38276515996 868.38166993586 102.69 2 -1.621678216177788 0.4296488653042791 1.0 ['ENSG00000204308|ENST00000375094|RNF5'] 112747 15790 TLHHLALI True PC9_epitope_Rep6 916.54943656224 916.54832993586 72.988 2 -1.6216891217340446 0.4296488653042791 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 138045 23909 YGCLYCGC True H1975_Epitope_Rep3 880.2917675212 880.29121496793 99.679 1 -1.621705526575694 0.4296488653042791 1.0 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'ENST00000472364.1_1_21:47974114-47978399:+|nuORF'] 129208 10389 VQTDQRVL True PC9_epitope_Rep4 957.5243440132099 957.52324993586 47.662 2 -1.6217247518537068 0.4296488653042791 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 39670 4861 HLQQPQQST True PC9_epitope_Rep4 1065.52032126193 1065.51922993586 25.287 2 -1.6217437356907614 0.4296488653042791 1.0 ['ZNF292|p.N1433H|1|0.12|ENSG00000188994|chr6:87257926-87257926|A/C|missense_variant'] 63317 24223 LLSVLFSQT True H1975_Epitope_Rep2 1006.5698972233 1006.56937496793 99.708 1 -1.621817941733362 0.4296488653042791 1.0 ['nc|ENSG00000146469|P01282-2|VIP', 'ENSG00000146469|ENST00000367244|VIP'] 18405 11173 EIVSTIRQISH True H1975_Epitope_Rep1 1281.70409928033 1281.70300993586 47.945 2 -1.6219032102363777 0.4296553047837328 1.0 ['RSPRY1|p.R568T|1|0.1|ENSG00000159579|chr16:57238947-57238947|G/C|missense_variant'] 32783 20452 GHFCLCPL True PC9_epitope_Rep6 888.39861554824 888.39750993586 91.384 2 -1.6219612277952682 0.42969561486700086 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 15874 20975 EDHELIYC True NCI_RA007_Epitope_Rep5 1020.42224701344 1020.42114993586 87.689 2 -1.6221806958007485 0.42973592404005734 1.0 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 58800 17044 LESLPAHLPRS True H1975_Epitope_Rep1 1218.67207087606 1218.67096993586 70.985 2 -1.6222355022774766 0.42973751058425064 1.0 ['ENSG00000126861|ENST00000247271|OMG'] 38039 9421 HASDLRVEVQK True NCI_RA007_Epitope_Rep3 1280.6836981889198 1280.68260993586 44.14 2 -1.6222400257726448 0.42973751058425064 1.0 ['ENSG00000131381|ENST00000253699|RBSN'] 65438 12740 LRHKKMGRSC True PC9_epitope_Rep4 1214.6488504170197 1214.64774993586 56.863 2 -1.622291634939499 0.42975523843930635 1.0 ['ENST00000380629.6_1_8:26248887-26265531:+|nuORF'] 444 8654 AALPPRPPA True NCI_RA007_Epitope_Rep4 888.51813643396 888.51702993586 40.071 2 -1.6223437805191925 0.4297568244936666 1.0 ['ENST00000284617.6_1_1:229462728-229478156:-|nuORF', 'ENST00000483092.1_1_1:229463235-229478156:-|nuORF'] 62221 11681 LLEVTQSNVEI True NCI_RA007_Epitope_Rep3 1243.6659824361097 1243.6648899358602 53.064 2 -1.622355614564265 0.4297568244936666 1.0 ['ENSG00000187889|ENST00000343433|FYB2', 'nc|ENSG00000187889|Q5VWT5-2|FYB2'] 32948 16200 GICNKRFKLKH True PC9_epitope_Rep2 1342.7655944214198 1342.7644899358602 67.563 2 -1.6223975724759385 0.4297584104764055 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 86999 13658 QMGIRGLP True H1975_Epitope_Rep2 870.4745573698199 870.47346993586 57.674 2 -1.6223992709096888 0.4297584104764055 1.0 ['ENST00000486080.5_1_6:70926602-70955360:-|nuORF', 'ENST00000489611.5_1_6:70926602-70990065:-|nuORF', 'nc|ENSG00000112280|P20849-2|COL9A1', 'ENSG00000112280|ENST00000357250|COL9A1'] 132004 6347 VTSPRLSL True NCI_RA007_Epitope_Rep4 871.51271670035 871.51160993586 31.019 2 -1.6225086791280654 0.4297987153001208 1.0 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'ENST00000594090.5_1_19:50491627-50519408:-|nuORF'] 112336 9930 TLADSVCRYD True NCI_RA007_Epitope_Rep1 1141.50737361973 1141.50626993586 42.628 2 -1.6227367177540206 0.4298728861393963 1.0 ['nc|ENSG00000077684|Q6IE81-3|JADE1', 'nc|ENSG00000077684|Q6IE81-2|JADE1', 'ENSG00000077684|ENST00000226319|JADE1'] 92652 23598 RNKVWRHRLH True NCI_RA007_Epitope_Rep4 1400.80140276652 1400.80030993586 102.37 2 -1.6229498512766307 0.42989061106532855 1.0 ['ENST00000583079.1_1_17:18023566-18025792:+|nuORF'] 49363 9214 KESQVDELNIW True H1975_Epitope_Rep3 1359.6670450652698 1359.66594993586 40.434 2 -1.6229768626586596 0.42989704687076674 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 110657 8717 TFYIAPSPG True NCI_RA007_Epitope_Rep1 951.4701831820298 951.46908993586 37.91 2 -1.6230834396185974 0.42989862958029484 1.0 ['ENST00000532245.5_1_11:57529333-57563148:+|nuORF'] 46054 9448 ISGNMKMQ True H1975_Epitope_Rep1 907.42555857207 907.42446993586 41.257 2 -1.6232643322364306 0.42989862958029484 1.0 ['ENST00000396953.6_2_3:12882387-12882978:-|nuORF'] 139876 7811 YPQWRRIH True NCI_RA007_Epitope_Rep1 1154.6097454030198 1154.60864993586 34.375 2 -1.6233451882971954 0.42990664755217917 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 91449 5581 RHQDISKAFT True NCI_RA007_Epitope_Rep1 1201.6203696563698 1201.61926993586 25.775 2 -1.6234988160323511 0.42990664755217917 1.0 ['nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6', 'nc|ENSG00000186976|Q5THR3-3|EFCAB6'] 104609 15556 SQRQLYQFSFW True NCI_RA007_Epitope_Rep2 1488.7149983171998 1488.71390993586 65.216 2 -1.62351863724208 0.42990664755217917 1.0 ['ENST00000399410.7_1_16:16235562-16235850:+|nuORF'] 9561 22165 AWEHLVYWRLR True NCI_RA007_Epitope_Rep4 1527.8099017615498 1527.8088099358602 96.131 2 -1.623629869696583 0.42991308274071566 1.0 ['ENSG00000105464|ENST00000263269|GRIN2D'] 15572 20471 EAQLAQVRH True PC9_epitope_Rep4 1050.5570411238198 1050.55594993586 86.888 2 -1.623724741086494 0.4299275345960223 1.0 ['nc|ENSG00000160401|Q5JU67-2|CFAP157', 'ENSG00000160401|ENST00000373295|CFAP157'] 55267 17796 LADPLKVIE True H1975_Epitope_Rep3 996.58554728744 996.58444993586 74.449 2 -1.6237301760572664 0.4299275345960223 1.0 ['DHRS9|p.V217L|1|0.34|ENSG00000073737|chr2:169091866-169091866|G/T|missense_variant'] 142609 13120 YYLVKREDYLY True H1975_Epitope_Rep3 1523.7660308305499 1523.7649299358602 55.711 2 -1.6237611024118621 0.4299275345960223 1.0 ['ENSG00000151366|ENST00000281031|NDUFC2', 'nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14'] 37952 9235 HADAVGPV True NCI_RA007_Epitope_Rep1 764.3817025308 764.38115496793 39.92 1 -1.6237627701637005 0.4299275345960223 1.0 ['PXDN|p.N750Tfs*115|1|0.06|ENSG00000130508|chr2:1649527-1649531|CAGGT/-|frameshift_variant'] 74067 8516 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 37.711 1 -1.623861725624088 0.42993396918561994 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 3797 12491 AGTVKSIPRGF True PC9_epitope_Rep2 1131.6400424717897 1131.63838490379 53.355 3 -1.6239612178979672 0.42995169082125606 1.0 ['SLC26A4|p.I327T|1|0.46|ENSG00000091137|chr7:107683516-107683516|T/C|missense_variant'] 81380 13732 PLDPVLQNPL True NCI_RA007_Epitope_Rep4 1104.61791004488 1104.6168099358601 60.044 2 -1.6240808775265152 0.4299919861846338 1.0 ['nc|ENSG00000173068|Q6ZN30-2|BNC2', 'ENSG00000173068|ENST00000380672|BNC2'] 52397 8881 KKMLFLVKR True H1975_Epitope_Rep1 1161.74200544253 1161.7403549037901 39.072 3 -1.62417899843435 0.43001128668171557 1.0 ['ENST00000260665.11_1_2:44145453-44145528:-|nuORF'] 38681 7536 HFYKDFSKREL True NCI_RA007_Epitope_Rep2 1468.7462984454799 1468.7446649037902 33.939 3 -1.6242274480230592 0.43001128668171557 1.0 ['ENST00000354577.8_1_6:131911469-131911529:-|nuORF'] 13628 13278 DPKYATPQV True H1975_Epitope_Rep1 1017.5131106231698 1017.51257496793 56.175 1 -1.624228166040452 0.43001128668171557 1.0 ['ENSG00000061938|ENST00000672887|TNK2', 'nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF'] 113414 20377 TLSFCRTNF True PC9_epitope_Rep3 1087.51206507735 1087.5109699358602 83.631 2 -1.6243723476750953 0.43004672580754383 1.0 ['ENSG00000186886|ENST00000641440|OR5D3P'] 38547 23086 HETGHVLG True H1975_Epitope_Rep2 848.41406528824 848.41296993586 95.263 2 -1.624377030237777 0.43004672580754383 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 84732 3440 QDRLRALVVIP True PC9_epitope_Rep3 1278.77720465094 1278.7761099358602 18.358 2 -1.6244090763790788 0.4300483048169383 1.0 ['ENSG00000101017|ENST00000372285|CD40'] 94255 22757 RRQRTHSL True PC9_epitope_Rep2 1052.59515796804 1052.59406993586 93.027 2 -1.624413099920676 0.4300483048169383 1.0 ['ENST00000501520.1_1_16:28303156-28303378:-|nuORF'] 26300 24746 FHIRVRTA True PC9_epitope_Rep4 998.5773826455799 998.57628993586 103.69 2 -1.6244525193724537 0.43005473731730715 1.0 ['EPHA6|p.G737Efs*8|1|0.12|ENSG00000080224|chr3:97532366-97532366|G/-|frameshift_variant', 'nc|ENSG00000080224|Q9UF33|EPHA6', 'ENSG00000080224|ENST00000389672|EPHA6'] 49575 20628 KFRSLLFTS True NCI_RA007_Epitope_Rep2 1097.6233297784897 1097.62222993586 85.317 2 -1.6245591865935722 0.4300853196099675 1.0 ['nc|ENSG00000168748|P43166-2|CA7', 'ENSG00000168748|ENST00000338437|CA7'] 127699 18775 VPAGHNKWS True PC9_epitope_Rep5 994.49846361854 994.49736993586 77.231 2 -1.6245744311109842 0.4300853196099675 1.0 ['ENSG00000136463|ENST00000258975|TACO1', 'ENST00000581120.1_1_17:61678442-61683801:+|nuORF'] 69112 15080 LTRHQKIHTRK True H1975_Epitope_Rep1 1416.84259887216 1416.8415099358601 63.257 2 -1.6245932275828558 0.4300853196099675 1.0 ['ENSG00000142528|ENST00000270617|ZNF473'] 62824 17296 LLLWTPLPM True H1975_Epitope_Rep3 1082.61982462118 1082.6192749679299 72.179 1 -1.6246820766602066 0.43008847560149865 1.0 ['ENSG00000198888|ENST00000361390|MT-ND1'] 100320 23969 SKKKGPRTP True H1975_Epitope_Rep2 997.6032630402499 997.60216993586 98.716 2 -1.624684420149242 0.43008847560149865 1.0 ['nc|ENSG00000123200|Q5T200-2|ZC3H13', 'nc|ENSG00000123200|Q5T200|ZC3H13', 'ENSG00000123200|ENST00000679008|ZC3H13', 'ENST00000470308.1_1_13:46575591-46585648:-|nuORF', 'ZC3H13|p.Q920Tfs*25|1|0.33|ENSG00000123200|chr13:45969786-45969787|-/T|frameshift_variant'] 8826 5729 AVEEYVYDFRD True H1975_Epitope_Rep1 1404.6197605196796 1404.61866993586 27.105 2 -1.6247279036142654 0.43008847560149865 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 66964 12308 LSPDLSHTTL True PC9_epitope_Rep6 1082.56078909158 1082.5596899358602 58.736 2 -1.6247433498308081 0.43008847560149865 1.0 ['ENSG00000198734|ENST00000367797|F5'] 80427 18784 PGKNRDLK True NCI_RA007_Epitope_Rep4 926.5297637468199 926.52866993586 81.266 2 -1.6248556944954693 0.4300900534904191 1.0 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C', 'CORO1C|p.V405F|1|0.07|ENSG00000110880|chr12:108648697-108648697|C/A|missense_variant'] 123258 22293 VGLKFMQV True PC9_epitope_Rep2 920.51535955264 920.5148149679301 91.228 1 -1.6248860770065288 0.4300900534904191 1.0 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF'] 30748 15620 GALNKSTV True NCI_RA007_Epitope_Rep5 788.43921740692 788.4386649679301 66.792 1 -1.624979001747421 0.4300916313081159 1.0 ['nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47', 'CD47|p.I86Kfs*4|1|0.03|ENSG00000196776|chr3:108080134-108080135|-/AGCTTCT|frameshift_variant'] 93870 13719 RREPLLNHL True NCI_RA007_Epitope_Rep3 1146.6621748987 1146.66052490379 61.286 3 -1.6249974360528874 0.4300916313081159 1.0 ['DEPDC7|p.S312R|1|0.42|ENSG00000121690|chr11:33031531-33031531|T/A|missense_variant'] 22018 25004 ESILKKFRKA True PC9_epitope_Rep5 1218.7448418934998 1218.74374993586 101.34 2 -1.6254842363451474 0.43014963100047393 1.0 ['ENST00000409484.5_1_2:172411796-172411952:+|nuORF'] 27731 24362 FPRKPGKRQ True H1975_Epitope_Rep2 1112.6566955954397 1112.65558993586 100.24 2 -1.6255401227496111 0.43014963100047393 1.0 ['ENST00000606961.1_1_6:33664022-33664205:-|nuORF'] 30928 22452 GARAGTGREL True PC9_epitope_Rep2 986.5257409955399 986.52464993586 91.851 2 -1.6255609819512928 0.4301527837331588 1.0 ['nc|ENSG00000170291|Q8TE02-1|ELP5'] 112768 21281 TLHQKDLDC True PC9_epitope_Rep5 1071.5018943164698 1071.5007899358602 86.91 2 -1.625615877213301 0.4301527837331588 1.0 ['ENSG00000102189|ENST00000322349|EEA1', 'EEA1|p.S653*|1|0.32|ENSG00000102189|chr12:92813065-92813065|G/-|frameshift_variant'] 92009 26120 RKRLLFYIVL True NCI_RA007_Epitope_Rep2 1319.84416201195 1319.84251490379 110.9 3 -1.6257192448501756 0.4301527837331588 1.0 ['ENST00000348165.9_1_7:156931958-156961760:+|nuORF'] 10319 3835 CEAPVSIPC True PC9_epitope_Rep3 917.39867511789 917.39756993586 19.85 2 -1.6258586207965597 0.4301527837331588 1.0 ['ENSG00000178163|ENST00000326756|ZNF518B', 'ZNF518B|p.R1005Gfs*3|1|0.19|ENSG00000178163|chr4:10443316-10443316|T/-|frameshift_variant'] 36713 14556 GVIWQKCHF True NCI_RA007_Epitope_Rep4 1116.55387031968 1116.5527699358602 63.365 2 -1.6259799067919816 0.4301817812531736 1.0 ['ENST00000564439.5_1_15:66795703-66797150:-|nuORF'] 32709 15851 GGTTIHFP True PC9_epitope_Rep2 828.41300265908 828.4124549679301 66.23 1 -1.626033618919182 0.43019464033850496 1.0 ['GUCY2F|p.P437T|1|0.23|ENSG00000101890|chrX:109453583-109453583|G/T|missense_variant'] 138087 23060 YGGKAAPAA True PC9_epitope_Rep6 804.4130026590799 804.4124549679301 101.8 1 -1.6260913016035872 0.43019464033850496 1.0 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 120734 18813 VEKMRKCL True PC9_epitope_Rep1 1005.5463424110899 1005.5452499358599 77.151 2 -1.626210752531288 0.4302010696635299 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.D4820Tfs*12|1|0.44|ENSG00000128731|chr15:28111810-28111810|C/-|frameshift_variant', 'HERC2|p.D4111Tfs*22|1|0.43|ENSG00000128731|chr15:28132730-28132730|C/-|frameshift_variant', 'HERC2|p.P1887Lfs*5|1|0.71|ENSG00000128731|chr15:28220639-28220639|C/-|frameshift_variant'] 90001 20652 RDMKGALS True NCI_RA007_Epitope_Rep5 876.4487365447999 876.44762993586 86.393 2 -1.626331573205295 0.43020749884346754 1.0 ['ENSG00000180016|ENST00000322608|OR1E1'] 91223 18766 RGEQGEPG True H1975_Epitope_Rep2 828.3725943990798 828.37148993586 77.913 2 -1.6264502693496643 0.43021392787832285 1.0 ['COL25A1|p.R375Q|1|0.4|ENSG00000188517|chr4:108863347-108863347|C/T|missense_variant'] 43261 21074 IFQKRRYKHDH True PC9_epitope_Rep2 1526.8218634275802 1526.8207699358602 86.518 2 -1.626590668817005 0.43023150864208676 1.0 ['nc|ENSG00000205838|Q6PF05-3|TTC23L'] 40185 18858 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 78.296 3 -1.6266064525355115 0.43023150864208676 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 48632 26177 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 109.09 3 -1.6267407150199529 0.43023150864208676 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 93991 24577 RRKKKRKKLCQ True H1975_Epitope_Rep3 1470.94053909162 1470.93889490379 102.27 3 -1.626901976573343 0.43023150864208676 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A'] 39808 18345 HNAEIALPVL True PC9_epitope_Rep5 1075.60259433391 1075.6014899358602 75.58 2 -1.626966665156479 0.43023150864208676 1.0 ['ENST00000577711.1_1_17:73389565-73389709:-|nuORF'] 82939 13633 PSDNYDFPP True H1975_Epitope_Rep2 1050.42944056886 1050.42887496793 57.578 1 -1.626971486097908 0.43023150864208676 1.0 ['nc|ENSG00000141255|Q8NHS9-3|SPATA22', 'ENSG00000141255|ENST00000572969|SPATA22'] 20709 17941 EQEKLLRICSI True PC9_epitope_Rep4 1330.7278715000198 1330.7262149037902 77.061 3 -1.6269749524628958 0.43023150864208676 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L'] 133397 14787 VVVLLSAE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 63.55 2 -1.6269944858496534 0.43023150864208676 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant'] 81684 12049 PLLTDQQVNK True PC9_epitope_Rep3 1154.6295373577398 1154.62844993586 51.384 2 -1.6270603839218996 0.43024921872355787 1.0 ['DLG5|p.E144K|1|0.43|ENSG00000151208|chr10:77856836-77856836|C/T|missense_variant'] 129391 15968 VRELRGLG True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 70.484 2 -1.6270705302662796 0.43025564656242243 1.0 ['ENSG00000171793|ENST00000650070|CTPS1'] 125672 25341 VKLLPLGAT True PC9_epitope_Rep2 910.5851533646199 910.58404993586 103.15 2 -1.6271394108877661 0.43027492920883115 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A', 'ENST00000526234.1_1_19:17530944-17533268:+|nuORF', 'MVB12A|p.M105I|1|0.42|ENSG00000141971|chr19:17422360-17422360|G/T|missense_variant', 'MVB12A|p.D116V|1|0.42|ENSG00000141971|chr19:17422392-17422392|A/T|missense_variant'] 37129 5814 GVPYTYTVQL True PC9_epitope_Rep4 1139.58627556343 1139.5846349037902 29.223 3 -1.6271452888238915 0.43027492920883115 1.0 ['ENSG00000213015|ENST00000325333|ZNF580'] 63139 17192 LLRKLGVKLV True H1975_Epitope_Rep3 1137.7961491903698 1137.79557496793 71.769 1 -1.6271475416103713 0.43027492920883115 1.0 ['nc|ENSG00000141556|Q9BTW9-4|TBCD', 'ENSG00000141556|ENST00000355528|TBCD', 'TBCD|p.G460Afs*24|1|0.23|ENSG00000141556|chr17:82870282-82870282|G/-|frameshift_variant', 'nc|ENSG00000141556|Q9BTW9-5|TBCD'] 115027 13939 TRCGDGGK True NCI_RA007_Epitope_Rep5 792.3548361599599 792.35372993586 60.3 2 -1.6272660559322316 0.4302926378014936 1.0 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 129551 23534 VRLKLQHT True H1975_Epitope_Rep2 993.60834842069 993.60724993586 97.004 2 -1.6273173025740695 0.43029421055006545 1.0 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158', 'ENST00000504667.2_1_4:77255161-77272959:-|nuORF'] 22908 17602 EVEAVKFLK True PC9_epitope_Rep5 1061.6120963884498 1061.61098993586 72.714 2 -1.627340845856206 0.43029421055006545 1.0 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-4|SRCIN1'] 37202 14167 GVRACACA True PC9_epitope_Rep3 749.3312642644099 749.33016993586 59.579 2 -1.6273786382500182 0.430297355834311 1.0 ['ENST00000216133.9_1_22:39548552-39548627:-|nuORF'] 44341 18999 ILDQRPKYV True PC9_epitope_Rep6 1130.64479349906 1130.64368993586 85.723 2 -1.6273858497037221 0.430297355834311 1.0 ['ENST00000469479.1_1_3:184550518-184567079:+|nuORF'] 30018 20357 FYDGIKAILQ True PC9_epitope_Rep3 1166.6335601090198 1166.6324699358602 83.552 2 -1.6274174662187109 0.430297355834311 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B'] 79629 7248 PDMARAAV True PC9_epitope_Rep3 829.4116227600899 829.41052993586 32.89 2 -1.6274239873275398 0.430297355834311 1.0 ['ENSG00000137675|ENST00000260229|MMP27'] 78755 23002 PAAGSARGEKE True PC9_epitope_Rep4 1071.5308859456297 1071.53037496793 96.697 1 -1.627477721983327 0.43031506277566584 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 130718 15953 VSVNTWTP True PC9_epitope_Rep1 902.44978209062 902.44868993586 66.173 2 -1.6275259321455673 0.4303327693175409 1.0 ['ENST00000244051.2_1_20:49576777-49576906:+|nuORF'] 119024 15974 VAFLAKLR True H1975_Epitope_Rep2 916.5858220709599 916.58472993586 66.644 2 -1.6275356773973255 0.43034562108017865 1.0 ['ENST00000590574.5_2_19:11072039-11072372:+|nuORF'] 125074 9493 VIDWEYWRPQW True H1975_Epitope_Rep1 1576.7462984454799 1576.7452099358602 41.434 2 -1.6275507041462987 0.43034562108017865 1.0 ['ENSG00000106302|ENST00000223026|HYAL4'] 53610 23242 KRSKKFID True NCI_RA007_Epitope_Rep5 1020.6080140675198 1020.60690993586 96.671 2 -1.6276730247347269 0.4303600433134813 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 12910 10859 DLKHRRHYQRF True H1975_Epitope_Rep1 1554.8280114371798 1554.8269099358602 46.728 2 -1.6276895726915948 0.4303600433134813 1.0 ['ENST00000404299.3_1_12:22478158-22478320:-|nuORF'] 36849 12579 GVLKDHEKI True PC9_epitope_Rep4 1037.58694426977 1037.58584993586 56.213 2 -1.6278762224015468 0.4303600433134813 1.0 ['HNRNPU|p.Q207Sfs*132|1|0.2|ENSG00000153187|chr1:244863689-244863689|G/-|frameshift_variant'] 66969 12795 LSPDTVQRL True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 57.078 2 -1.6279071423479865 0.4303600433134813 1.0 ['ENSG00000184571|ENST00000616349|PIWIL3', 'nc|ENSG00000184571|Q7Z3Z3|PIWIL3'] 2605 8423 AERMVSMAWL True H1975_Epitope_Rep3 1192.5732854349199 1192.57218993586 37.384 2 -1.6280693774611592 0.43037931851250294 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 36052 17735 GVAAAGHA True PC9_epitope_Rep6 652.3292730351201 652.32872496793 80.851 1 -1.6280952707065732 0.43037931851250294 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 16256 16830 EEEWRQRRR True PC9_epitope_Rep3 1343.6806784971498 1343.6795899358601 69.889 2 -1.6281349852878477 0.43037931851250294 1.0 ['ENST00000555166.5_2_14:57857320-57866549:+|nuORF', 'ENST00000554703.1_1_14:57857320-57876115:+|nuORF'] 125310 8162 VINVIRVTI True NCI_RA007_Epitope_Rep4 1025.6597152872098 1025.65860993586 38.184 2 -1.6283347897128524 0.4303985924071192 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 105762 5271 SSGHRDRERD True NCI_RA007_Epitope_Rep4 1213.5548092776899 1213.55370993586 26.824 2 -1.628370753383502 0.4303985924071192 1.0 ['nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4'] 56240 7796 LCNGAILAHC True NCI_RA007_Epitope_Rep2 1013.47865677409 1013.47754993586 34.952 2 -1.6283972476689617 0.4303985924071192 1.0 ['nc|ENSG00000131747|P11388-4|TOP2A'] 133052 25813 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 109.35 2 -1.628576779658127 0.4304224272085523 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 87249 16127 QPLSKDLP True PC9_epitope_Rep3 896.4967322830399 896.49618496793 67.181 1 -1.6286205172718653 0.4304224272085523 1.0 ['GDF2|p.E301Gfs*48|1|0.19|ENSG00000263761|chr10:47325392-47325402|CACGAGGAGGA/-|frameshift_variant'] 138967 24040 YKLPLAVG True NCI_RA007_Epitope_Rep2 859.5167394516299 859.51564993586 100.97 2 -1.6286267212192098 0.4304224272085523 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'TEX14|p.D842Gfs*23|1|0.06|ENSG00000121101|chr17:58593623-58593624|AT/-|frameshift_variant', 'ENSG00000121101|ENST00000349033|TEX14'] 49649 15408 KGKGLIAA True NCI_RA007_Epitope_Rep2 756.4857736765199 756.48466993586 64.635 2 -1.6286562464406755 0.4304224272085523 1.0 ['ENST00000586783.5_1_19:14000644-14000983:-|nuORF'] 139766 26518 YPEYLSNFP True H1975_Epitope_Rep2 1128.51277627 1128.51112490379 109.17 3 -1.628740531671315 0.4304224272085523 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 88389 21874 QSLGHRRR True PC9_epitope_Rep4 1008.5689432202 1008.56784993586 92.349 2 -1.6287939500595312 0.4304224272085523 1.0 ['ENST00000283921.4_1_7:27211779-27213458:-|nuORF'] 49218 17911 KENLGWQKL True PC9_epitope_Rep1 1114.61349337078 1114.6123899358602 73.686 2 -1.628924141516723 0.4304224272085523 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 108728 20973 SYRQPIII True PC9_epitope_Rep2 988.5705659296398 988.56946993586 86.123 2 -1.6289438768322149 0.4304224272085523 1.0 ['nc|ENSG00000173262|Q8TDB8-4|SLC2A14', 'ENSG00000059804|ENST00000075120|SLC2A3', 'ENSG00000173262|ENST00000431042|SLC2A14', 'nc|ENSG00000173262|Q8TDB8|SLC2A14', 'nc|ENSG00000173262|Q8TDB8-5|SLC2A14', 'ENST00000495813.5_1_12:8082264-8082456:-|nuORF', 'ENST00000490763.1_1_12:8078421-8082456:-|nuORF', 'SLC2A3|p.L418Yfs*35|1|0.26|ENSG00000059804|chr12:7922840-7922841|-/T|frameshift_variant'] 61006 4939 LIENEEPV True PC9_epitope_Rep1 941.4705771048499 941.46948993586 23.86 2 -1.6289477103482013 0.4304224272085523 1.0 ['ENSG00000166135|ENST00000299163|HIF1AN'] 10870 12975 CWALYALWG True PC9_epitope_Rep4 1081.5055231449298 1081.5044299358601 57.802 2 -1.6289510503582545 0.4304224272085523 1.0 ['ENST00000227525.7_1_11:60690217-60690481:+|nuORF'] 20335 5886 ENVQRNLKH True PC9_epitope_Rep6 1136.6050539454 1136.60341490379 30.889 3 -1.628960278944827 0.4304224272085523 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 59643 13211 LGAASPRGWVV True H1975_Epitope_Rep1 1111.61382772395 1111.6127299358602 55.913 2 -1.6291219006385682 0.4304224272085523 1.0 ['ENST00000538936.6_2_17:79860746-79861205:-|nuORF'] 5413 13712 ALTATPFAP True H1975_Epitope_Rep2 887.4752685624699 887.47472496793 57.886 1 -1.6291373536897196 0.4304224272085523 1.0 ['LRFN2|p.A582Pfs*75|1|0.29|ENSG00000156564|chr6:40392570-40392570|G/-|frameshift_variant', 'ENSG00000156564|ENST00000338305|LRFN2'] 52937 23793 KPGLRKIRHHW True PC9_epitope_Rep1 1426.84220494934 1426.84054490379 96.318 3 -1.6291483138450789 0.4304224272085523 1.0 ['ENST00000246151.8_1_1:24113939-24114161:+|nuORF'] 86282 17840 QIRQWQRYREM True NCI_RA007_Epitope_Rep2 1592.79941373084 1592.79830993586 74.134 2 -1.629164985404684 0.4304224272085523 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1'] 123782 3013 VGRKNAGH True NCI_RA007_Epitope_Rep2 837.4569331597299 837.45582993586 16.284 2 -1.6292839489309159 0.4304224272085523 1.0 ['ENST00000540801.5_1_17:28030060-28175877:-|nuORF', 'ENST00000579040.5_1_17:28030063-28257182:-|nuORF', 'ENST00000578411.1_1_17:28120861-28257182:-|nuORF'] 135734 10869 WLWLDLWYLMF True H1975_Epitope_Rep1 1584.78392982416 1584.78282993586 46.767 2 -1.6293709656705428 0.4304401267492868 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000507209.5_1_4:187118658-187122526:+|nuORF'] 112815 13641 TLIIQVMLVYF True NCI_RA007_Epitope_Rep2 1338.7621317504197 1338.76102993586 57.699 2 -1.6295154880522722 0.4304561086993291 1.0 ['ENST00000400151.6_1_4:728053-728236:+|nuORF'] 39040 22196 HHSEEEEE True H1975_Epitope_Rep3 1024.3733822447198 1024.3722899358602 92.819 2 -1.6295749831278825 0.4304561086993291 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 29621 25963 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 105.67 3 -1.629592986283357 0.4304561086993291 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 62677 17756 LLLKTHPD True PC9_epitope_Rep1 935.54401682863 935.54290993586 73.095 2 -1.6296120730497565 0.4304561086993291 1.0 ['ENST00000524260.1_1_8:93972764-93977317:-|nuORF'] 64737 6472 LPWYLLTFR True NCI_RA007_Epitope_Rep5 1207.67536535135 1207.67371490379 31.56 3 -1.6296355423629947 0.4304561086993291 1.0 ['ENST00000490889.2_1_3:9372279-9404666:-|nuORF', 'ENST00000518331.1_1_3:9379357-9404666:-|nuORF', 'ENST00000466431.6_1_3:9391695-9404624:-|nuORF', 'ENST00000491930.2_1_3:9367773-9404666:-|nuORF'] 52947 18456 KPGPLRRAH True NCI_RA007_Epitope_Rep5 1030.6148307834599 1030.6137299358602 77.818 2 -1.6296763053887118 0.4304561086993291 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 17172 8469 EGRRRPRRRR True NCI_RA007_Epitope_Rep3 1393.8351625062899 1393.83352490379 40.392 3 -1.6297046694608075 0.43046253072638296 1.0 ['ENST00000378308.6_2_X:40944993-40945185:+|nuORF'] 54104 10886 KVLNSGNF True PC9_epitope_Rep1 877.46576650793 877.46466993586 46.757 2 -1.6297476126698993 0.4304689526086123 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1', 'SYNJ1|p.D661Efs*36|1|0.04|ENSG00000159082|chr21:32666516-32666519|GTTG/-|frameshift_variant', 'nc|ENSG00000159082|O43426-5|SYNJ1'] 62911 14092 LLPATRWL True PC9_epitope_Rep1 968.58073669052 968.57962993586 59.034 2 -1.6298362594650866 0.4304866498286127 1.0 ['ENSG00000145217|ENST00000398516|SLC26A1', 'nc|ENSG00000145217|Q9H2B4-2|SLC26A1'] 127523 14362 VNPINANN True NCI_RA007_Epitope_Rep2 854.42462997194 854.4240849679301 60.533 1 -1.6298755747942089 0.43049307129407255 1.0 ['POSTN|p.P680Qfs*5|1|0.38|ENSG00000133110|chr13:37574622-37574622|G/-|frameshift_variant', 'nc|ENSG00000133110|Q15063-7|POSTN', 'nc|ENSG00000133110|Q15063-6|POSTN', 'nc|ENSG00000133110|Q15063-4|POSTN', 'nc|ENSG00000133110|Q15063-10|POSTN', 'nc|ENSG00000133110|Q15063-2|POSTN', 'nc|ENSG00000133110|Q15063-3|POSTN', 'nc|ENSG00000133110|Q15063-9|POSTN', 'nc|ENSG00000133110|Q15063-8|POSTN', 'nc|ENSG00000133110|Q15063-5|POSTN', 'ENSG00000133110|ENST00000379747|POSTN', 'POSTN|p.T328Yfs*3|1|0.36|ENSG00000133110|chr13:37584842-37584843|-/A|frameshift_variant', 'POSTN|p.Q505Kfs*17|1|0.38|ENSG00000133110|chr13:37580577-37580577|G/-|frameshift_variant'] 30715 12782 GALGPCGR True NCI_RA007_Epitope_Rep5 729.35919326441 729.3586449679301 55.844 1 -1.630034017548803 0.4305107678430488 1.0 ['nc|ENSG00000185869|Q3KNS6-3|ZNF829'] 10643 4213 CPKLQLWEWRN True H1975_Epitope_Rep1 1471.7394392432298 1471.73779490379 21.166 3 -1.6301440550179724 0.4305171888917703 1.0 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 21558 4347 ERPGPSPLP True PC9_epitope_Rep5 948.5028802926399 948.50178993586 21.79 2 -1.6302272163589882 0.43053488476976504 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF', 'ENST00000601065.5_1_19:49605423-49611697:+|nuORF', 'ENST00000401730.5_1_19:49606720-49611697:+|nuORF', 'ENSG00000104852|ENST00000598441|SNRNP70'] 20465 20771 EPIKYFNNK True PC9_epitope_Rep5 1151.59750895347 1151.59640993586 84.946 2 -1.6302705937391377 0.43054130540177915 1.0 ['nc|ENSG00000174527|Q8N1T3-3|MYO1H', 'nc|ENSG00000174527|Q8N1T3|MYO1H', 'ENSG00000174527|ENST00000310903|MYO1H'] 40181 15298 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 64.001 3 -1.6302932179221448 0.43054772588901163 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 15373 10724 EAGVRVLCQGL True NCI_RA007_Epitope_Rep5 1143.6070280913498 1143.60592993586 47.889 2 -1.630454970620137 0.4305654208241727 1.0 ['ENST00000525522.5_1_11:494693-499199:-|nuORF', 'ENST00000525701.5_1_11:494693-500690:-|nuORF', 'ENSG00000023191|ENST00000354420|RNH1'] 32710 16421 GGTTIHFP True PC9_epitope_Rep3 828.41300265908 828.4124549679301 68.299 1 -1.630595520947745 0.430573406390223 1.0 ['GUCY2F|p.P437T|1|0.23|ENSG00000101890|chrX:109453583-109453583|G/T|missense_variant'] 125966 16850 VLDKLRSV True PC9_epitope_Rep4 928.57056592964 928.56946993586 72.795 2 -1.6306056536036118 0.430573406390223 1.0 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 47172 24480 ITWYPLFWIKL True H1975_Epitope_Rep1 1478.8325942687395 1478.8314899358602 101.46 2 -1.630626033079505 0.430573406390223 1.0 ['ENST00000358812.8_1_6:96044648-96044717:+|nuORF'] 93872 23956 RREPLLNHL True PC9_epitope_Rep1 1146.6621748987 1146.66052490379 96.951 3 -1.6308444929852246 0.43057982615362067 1.0 ['DEPDC7|p.S312R|1|0.42|ENSG00000121690|chr11:33031531-33031531|T/A|missense_variant'] 6201 22795 APNYRLKSLQK True PC9_epitope_Rep4 1316.75646920636 1316.75587496793 95.902 1 -1.630908812297564 0.43058624577226606 1.0 ['ENSG00000273841|ENST00000217893|TAF9'] 86381 7893 QKEDRYEEATE True NCI_RA007_Epitope_Rep2 1396.61065238796 1396.60954993586 35.333 2 -1.63100959518289 0.4306103582782801 1.0 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF'] 135543 24051 WKNFKEHH True PC9_epitope_Rep4 1124.55156182056 1124.55046993586 100.98 2 -1.6310181607958836 0.4306103582782801 1.0 ['ENSG00000100867|ENST00000250383|DHRS2'] 110530 23983 TFLDVKRLRQ True H1975_Epitope_Rep2 1274.7459045226599 1274.74480993586 98.772 2 -1.6310647402601803 0.4306119227994228 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 130391 19114 VSLGPDSPV True PC9_epitope_Rep4 869.44944773745 869.44834993586 81.613 2 -1.6310703545685987 0.4306119227994228 1.0 ['ENST00000391975.5_1_2:242168452-242168623:-|nuORF'] 95458 18541 RWLEKEERFLK True PC9_epitope_Rep4 1532.8463468399198 1532.84524993586 79.392 2 -1.6311803985292725 0.4306247604446148 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 123791 10424 VGRKTALH True NCI_RA007_Epitope_Rep3 880.52428444356 880.52318993586 48.072 2 -1.6311900840724156 0.4306247604446148 1.0 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF'] 55744 12332 LALRGGSL True PC9_epitope_Rep3 785.47593726881 785.47484993586 52.463 2 -1.6312517765256385 0.4306311790501313 1.0 ['ENST00000411637.6_2_9:134000990-134001116:+|nuORF'] 92171 7796 RLFPYSQYYRW True PC9_epitope_Rep5 1577.77793292693 1577.7762749037902 34.933 3 -1.6313643173798318 0.430655288640386 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF', 'ENST00000546761.5_1_12:57139854-57146049:-|nuORF'] 142760 5620 YYQRWGDDYDE True NCI_RA007_Epitope_Rep1 1508.5844376401199 1508.58334993586 25.923 2 -1.6313656903094298 0.430655288640386 1.0 ['ENST00000554165.1_1_14:91850766-91884010:-|nuORF'] 26480 12731 FIEERRARENR True PC9_epitope_Rep5 1474.7753071579798 1474.7742099358602 53.977 2 -1.6314079059655102 0.4306568520251153 1.0 ['ENST00000415992.5_1_9:139693810-139699267:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-3|CCDC183', 'ENST00000479371.5_1_9:139697227-139701184:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-4|CCDC183', 'ENST00000430612.5_1_9:139694306-139700853:+|nuORF', 'ENST00000371682.7_1_9:139690828-139700853:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-2|CCDC183', 'ENSG00000213213|ENST00000338005|CCDC183'] 123636 20398 VGQGVQAA True PC9_epitope_Rep6 728.3817025307999 728.38115496793 91.16 1 -1.6314101910825067 0.4306568520251153 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 24912 25434 FCDVHPVL True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 105.37 2 -1.6315092558277042 0.4306632699071152 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4S2|p.H241Tfs*40|1|0.3|ENSG00000174982|chr11:55651622-55651622|C/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 126095 7032 VLENNLGAP True PC9_epitope_Rep5 925.4868958753299 925.48578993586 32.017 2 -1.6317061781997937 0.4306761052370539 1.0 ['MAT2B|p.A178P|1|0.21|ENSG00000038274|chr5:163516523-163516523|G/C|missense_variant'] 82267 14075 PPGGGCGS True NCI_RA007_Epitope_Rep4 630.24316045266 630.2426149679301 61.422 1 -1.6317094336568394 0.4306761052370539 1.0 ['SLITRK3|p.Q949Kfs*8|1|0.12|ENSG00000121871|chr3:165187986-165187986|G/-|frameshift_variant', 'ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.G881V|1|0.55|ENSG00000121871|chr3:165188189-165188189|C/A|missense_variant'] 17949 18336 EIAYWNKLQQH True PC9_epitope_Rep3 1428.7149983172 1428.71335490379 75.739 3 -1.6318007095097706 0.4306775018878983 1.0 ['TTK|p.L575W|1|0.36|ENSG00000112742|chr6:80035094-80035094|T/G|missense_variant'] 36241 7832 GVDHQVISDS True PC9_epitope_Rep5 1055.4883524273098 1055.48724993586 35.069 2 -1.6318809396873082 0.4306775018878983 1.0 ['nc|ENSG00000075856|Q15020-4|SART3'] 20989 10370 EQRCPSDCH True H1975_Epitope_Rep3 1073.40186300537 1073.4007699358601 44.942 2 -1.6318862458551768 0.4306775018878983 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 1767 16259 AEGTARQPLPI True PC9_epitope_Rep5 1151.6298717109098 1151.6287699358602 67.531 2 -1.6320278229318281 0.4306775018878983 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 118028 6997 TYEGRQKMT True NCI_RA007_Epitope_Rep2 1112.52844341748 1112.52734993586 31.838 2 -1.6321413828672173 0.4306775018878983 1.0 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'GOPC|p.R190Lfs*4|1|0.11|ENSG00000047932|chr6:117575258-117575258|C/-|frameshift_variant', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 17067 5919 EGHPAKGN True PC9_epitope_Rep1 808.3827651599601 808.38166993586 27.582 2 -1.6322348605015138 0.4306775018878983 1.0 ['ENST00000328381.9_2_17:29297643-29297919:+|nuORF'] 84585 11835 QCLSSSLLLEK True H1975_Epitope_Rep3 1219.64822419699 1219.6471299358602 50.67 2 -1.6322716147368899 0.4306775018878983 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47655184-47666418:-|nuORF'] 99891 5763 SILTAVADEEP True NCI_RA007_Epitope_Rep1 1143.56593404167 1143.5648299358602 26.472 2 -1.6322967281619511 0.4306775018878983 1.0 ['ENST00000581133.5_1_17:26906381-26907081:-|nuORF', 'ENSG00000076382|ENST00000321765|SPAG5'] 97233 4357 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 23.848 2 -1.6323086471885426 0.4306775018878983 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 129780 22250 VRRGVTTK True PC9_epitope_Rep1 915.56139822827 915.56084496793 90.402 1 -1.6324539260881952 0.4306806270920915 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000488064.5_1_18:6961676-6965410:-|nuORF'] 61560 22201 LKIIEKAC True PC9_epitope_Rep4 916.54157430048 916.54046993586 93.642 2 -1.6325054190970638 0.4306806270920915 1.0 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant'] 97105 20023 SDIIILPHI True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 82.423 2 -1.6325083689331052 0.4306806270920915 1.0 ['nc|ENSG00000148842|Q9H8M5-3|CNNM2', 'CNNM2|p.L690Cfs*14|1|0.32|ENSG00000148842|chr10:103056959-103056959|C/-|frameshift_variant', 'nc|ENSG00000148842|Q9H8M5-2|CNNM2', 'ENSG00000148842|ENST00000369878|CNNM2'] 73431 21176 MVAACLLLFLE True H1975_Epitope_Rep2 1221.6501387732899 1221.6484949037902 87.649 3 -1.6325340510434676 0.4306806270920915 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 3336 6306 AGGLKELE True PC9_epitope_Rep5 815.4388830537499 815.43778993586 29.231 2 -1.6325853205043943 0.43068704354882337 1.0 ['nc|ENSG00000142186|Q96KG9-3|SCYL1', 'nc|ENSG00000142186|Q96KG9-4|SCYL1', 'nc|ENSG00000142186|Q96KG9-2|SCYL1', 'ENSG00000142186|ENST00000270176|SCYL1', 'nc|ENSG00000142186|Q96KG9-5|SCYL1', 'nc|ENSG00000142186|Q96KG9-6|SCYL1'] 124927 24533 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 100.92 2 -1.6326945072328034 0.43071114617378564 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 15983 10301 EDRHGYIW True PC9_epitope_Rep1 1074.4882928576599 1074.4871899358602 44.507 2 -1.632711946987302 0.43071114617378564 1.0 ['ENSG00000159069|ENST00000325285|FBXW5', 'ENST00000483559.5_1_9:139835382-139837095:-|nuORF', 'ENST00000459905.5_1_9:139835382-139837220:-|nuORF'] 111880 12468 TINRLFKV True PC9_epitope_Rep2 989.6022004110899 989.60110993586 53.269 2 -1.63276558072782 0.4307288320879963 1.0 ['ENST00000460679.5_3_21:27062258-27066094:+|nuORF'] 135711 5047 WLSAEVRPHGR True H1975_Epitope_Rep3 1306.6894522756998 1306.68781490379 24.535 3 -1.632823598386849 0.43073524771221205 1.0 ['ENST00000463608.5_1_22:21828989-21829627:-|nuORF', 'ENST00000466772.5_1_22:21063687-21064617:-|nuORF'] 78745 14566 PAAGGEAP True PC9_epitope_Rep1 668.31295426464 668.3124049679301 60.853 1 -1.6330014809730407 0.430748078526833 1.0 ['ENSG00000176788|ENST00000322611|BASP1'] 35640 10267 GTDGVQGLQTL True H1975_Epitope_Rep1 1087.55095268387 1087.54984993586 44.436 2 -1.633004049775119 0.430748078526833 1.0 ['ENSG00000123268|ENST00000262053|ATF1', 'ENSG00000118260|ENST00000353267|CREB1', 'nc|ENSG00000118260|P16220-1|CREB1'] 34454 17613 GPKKTKRE True H1975_Epitope_Rep3 942.5610638750999 942.55996993586 73.586 2 -1.6330505037580778 0.430754493717248 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 97228 5277 SDYSFSVIAMS True PC9_epitope_Rep5 1205.52744035797 1205.52634993586 25.314 2 -1.6332817258062118 0.43085747771504557 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 20450 9051 EPGSWPERP True NCI_RA007_Epitope_Rep4 1053.48795850449 1053.48686993586 41.648 2 -1.6333339061227359 0.43085747771504557 1.0 ['ENSG00000197951|ENST00000599599|ZNF71', 'nc|ENSG00000197951|Q9NQZ8|ZNF71', 'ZNF71|p.G60Efs*18|1|0.22|ENSG00000197951|chr19:56621465-56621466|-/A|frameshift_variant'] 45748 11177 ISAEDMELRWY True NCI_RA007_Epitope_Rep1 1411.64420144571 1411.6431099358601 47.475 2 -1.6333751235005556 0.4308638914557461 1.0 ['nc|ENSG00000215811|A8MVZ5|BTNL10P'] 46897 21793 ITLQWQIAI True PC9_epitope_Rep5 1084.62808080576 1084.6269899358601 88.859 2 -1.633643398802878 0.43087827635167114 1.0 ['ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 56986 6123 LDREQTDRYEF True H1975_Epitope_Rep1 1470.6739213508597 1470.6728299358601 28.622 2 -1.6337018826508911 0.43087827635167114 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7', 'PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 96596 11965 SAGHSGNN True H1975_Epitope_Rep3 742.2994294588201 742.29888496793 51.181 1 -1.6337369401447954 0.43087827635167114 1.0 ['ENSG00000125266|ENST00000646441|EFNB2'] 77407 4215 NSHWFWLKWVI True NCI_RA007_Epitope_Rep4 1514.78229003138 1514.78065490379 22.526 3 -1.6337500577344475 0.43087827635167114 1.0 ['nc|ENSG00000197506|Q9HAS3-2|SLC28A3', 'ENSG00000197506|ENST00000376238|SLC28A3'] 123635 20288 VGQGVQAA True PC9_epitope_Rep6 728.3817025307999 728.38115496793 90.738 1 -1.6338685094614958 0.4308959579910528 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 136119 12642 WRNYRMQFFFY True NCI_RA007_Epitope_Rep1 1656.7659883442398 1656.76488993586 53.155 2 -1.6338816461683492 0.43090237086450917 1.0 ['ENST00000368324.4_1_1:155852837-155852948:+|nuORF'] 28438 19217 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 80.782 2 -1.6343208963260463 0.43092123793107334 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 70282 8833 LVRRDEIR True H1975_Epitope_Rep1 1055.6199757335498 1055.6188699358602 38.898 2 -1.634335177310984 0.43092123793107334 1.0 ['nc|ENSG00000164088|Q96MI6-4|PPM1M', 'ENST00000489606.5_1_3:52280576-52282310:+|nuORF', 'ENST00000467471.5_1_3:52279924-52282310:+|nuORF', 'nc|ENSG00000164088|Q96MI6-1|PPM1M', 'nc|ENSG00000164088|Q96MI6-2|PPM1M', 'ENSG00000164088|ENST00000323588|PPM1M'] 121904 14046 VFRILDLE True H1975_Epitope_Rep3 1003.5702315764698 1003.56912993586 59.351 2 -1.6344638853747786 0.43092123793107334 1.0 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 122448 6649 VGDYWRNF True PC9_epitope_Rep5 1055.4824792012298 1055.48138993586 30.548 2 -1.634518315085269 0.43092123793107334 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant'] 86410 19148 QKHWLFKHLF True NCI_RA007_Epitope_Rep3 1382.76116066398 1382.7600699358602 83.621 2 -1.634527927662751 0.43092123793107334 1.0 ['TG|p.R2605Efs*49|1|0.12|ENSG00000042832|chr8:133116665-133116665|C/-|frameshift_variant', 'nc|ENSG00000042832|P01266-2|TG', 'ENSG00000042832|ENST00000220616|TG'] 91018 8788 RFFHWFSKWRK True H1975_Epitope_Rep1 1623.8575206603098 1623.8558849037902 38.731 3 -1.6345685370370147 0.43092123793107334 1.0 ['ENSG00000239713|ENST00000407997|APOBEC3G'] 58725 6404 LERTVPTAAGH True NCI_RA007_Epitope_Rep3 1150.6094706195 1150.60836993586 32.196 2 -1.6346220106807752 0.43092123793107334 1.0 ['ENST00000259351.9_1_9:129677065-129724587:+|nuORF'] 127177 24200 VLVFIKKV True NCI_RA007_Epitope_Rep5 944.6422743179198 944.64172496793 100.49 1 -1.6346265928887251 0.43092123793107334 1.0 ['ENSG00000101017|ENST00000372285|CD40'] 120547 13695 VEFWRYSKN True H1975_Epitope_Rep1 1227.6036569630699 1227.60254993586 57.814 2 -1.634697846794299 0.43092123793107334 1.0 ['ENST00000378962.3_1_X:30578440-30594892:-|nuORF'] 29626 25125 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 105.26 3 -1.6347273810435945 0.43092123793107334 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 80702 20353 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 85.226 2 -1.6347427502705776 0.43092123793107334 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 58941 10123 LETQNRAL True PC9_epitope_Rep2 943.5086939490699 943.50758993586 44.276 2 -1.6347475819821136 0.43092123793107334 1.0 ['ENSG00000148798|ENST00000369849|INA'] 97778 20332 SEKKLCGH True NCI_RA007_Epitope_Rep5 900.4487365447999 900.44762993586 85.145 2 -1.634807635854397 0.43092123793107334 1.0 ['ENST00000395811.9_1_17:17088549-17088822:+|nuORF'] 38019 22992 HAPALHLT True H1975_Epitope_Rep2 858.4711862415401 858.47008993586 94.887 2 -1.6348170577161074 0.43092123793107334 1.0 ['ENST00000308406.9_1_17:19284741-19284873:+|nuORF'] 105813 15945 SSKKSKVS True NCI_RA007_Epitope_Rep5 849.4919812557699 849.49088993586 68.058 2 -1.6348232990812541 0.43092123793107334 1.0 ['ENST00000560957.1_1_15:86225432-86228206:+|nuORF'] 137381 12106 YDTATHNVH True PC9_epitope_Rep4 1056.46247203264 1056.4613699358601 54.369 2 -1.6348281583779065 0.43092123793107334 1.0 ['nc|ENSG00000198022|A6NJ88|SAGE2P'] 52430 18876 KKRRHLTPT True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 79.451 2 -1.6348300160622429 0.43092123793107334 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 128040 14161 VPKMLLRG True NCI_RA007_Epitope_Rep5 912.5578930709598 912.55678993586 61.161 2 -1.6349691178066965 0.430940471362264 1.0 ['nc|ENSG00000165983|Q96BW5-2|PTER', 'ENSG00000165983|ENST00000535784|PTER'] 106617 6536 STQTSKIS True NCI_RA007_Epitope_Rep2 850.4396113297399 850.4390649679301 30.035 1 -1.6349692644706417 0.430940471362264 1.0 ['ENST00000370435.4_1_6:72003041-72003269:+|nuORF'] 30291 14554 GAAFSPTF True H1975_Epitope_Rep3 796.3755545212 796.3750049679301 61.349 1 -1.6349761943006929 0.430940471362264 1.0 ['nc|ENSG00000149452|Q8TCC7-5|SLC22A8', 'nc|ENSG00000149452|Q8TCC7-4|SLC22A8', 'ENSG00000149452|ENST00000336232|SLC22A8', 'nc|ENSG00000149452|Q8TCC7-2|SLC22A8'] 128691 16669 VPVTIIVL True H1975_Epitope_Rep2 852.56844067132 852.56734993586 69.35 2 -1.6350582099583149 0.4309484380456701 1.0 ['CDH20|p.K483I|1|0.25|ENSG00000101542|chr18:61539063-61539063|A/T|missense_variant'] 56468 6045 LDEPTPLP True NCI_RA007_Epitope_Rep2 880.4541987647199 880.45310993586 28.119 2 -1.6351450047013474 0.4309484380456701 1.0 ['ENST00000330212.7_1_3:113677346-113679605:+|nuORF'] 130742 19484 VSWEYLLY True PC9_epitope_Rep4 1071.5276980581498 1071.52660993586 83.061 2 -1.6351592138262727 0.4309484380456701 1.0 ['ENST00000454117.1_1_1:23697918-23697966:+|nuORF'] 19499 17302 ELPFLTHVN True NCI_RA007_Epitope_Rep3 1068.5603951687601 1068.55928993586 75.938 2 -1.6351807420481856 0.4309661139149243 1.0 ['ENSG00000178971|ENST00000651323|CTC1'] 91586 18497 RIKPRQRSL True NCI_RA007_Epitope_Rep4 1152.72035848116 1152.7192699358602 80.06 2 -1.6354039167018883 0.4310173920879517 1.0 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'nc|ENSG00000143514|Q13625-2|TP53BP2'] 9932 11123 AYLYGIISW True H1975_Epitope_Rep3 1084.5593325396 1084.55822993586 47.88 2 -1.6355828178900234 0.4310173920879517 1.0 ['ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055'] 128199 20171 VPMMYGAGKF True PC9_epitope_Rep1 1099.5194589569098 1099.5188749679298 82.417 1 -1.6355919726191719 0.4310173920879517 1.0 ['ENSG00000140093|ENST00000261994|SERPINA10'] 55484 8852 LAGFRGVP True H1975_Epitope_Rep3 815.4653725851098 815.46426993586 39.055 2 -1.6356052750630063 0.4310173920879517 1.0 ['ENST00000379888.8_1_10:6131069-6139013:+|nuORF'] 74445 5634 NEVDLLGPNQ True PC9_epitope_Rep1 1097.53530261973 1097.5342099358602 26.497 2 -1.635657124138956 0.4310173920879517 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 90973 27450 RFCHHQAC True PC9_epitope_Rep1 1000.4119741966 1000.41086993586 112.28 2 -1.6356790110624455 0.4310173920879517 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|120|3|sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|153|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|150|3|sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|17|1|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|119|3|sense'] 112235 23520 TKPGRSRFRRT True PC9_epitope_Rep3 1360.7799986155997 1360.7789099358602 95.75 2 -1.6357457120035557 0.4310173920879517 1.0 ['ENST00000450873.6_2_7:66236917-66240338:+|nuORF'] 80492 10756 PGLSGSSLEPH True NCI_RA007_Epitope_Rep5 1079.52473793603 1079.52364993586 48.011 2 -1.6358359339835837 0.4310173920879517 1.0 ['POU2F3|p.P156S|1|0.35|ENSG00000137709|chr11:120305051-120305051|C/T|missense_variant'] 36049 19614 GVAAAGHA True PC9_epitope_Rep3 652.3292730351201 652.32872496793 80.683 1 -1.63585305328923 0.43103506538855785 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 21314 8184 ERERFESDRDR True NCI_RA007_Epitope_Rep2 1493.6971164069298 1493.69600993586 36.47 2 -1.6361089387362857 0.43105273829101803 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'SPEN|p.I2489Sfs*10|1|0.09|ENSG00000065526|chr1:15933699-15933699|G/-|frameshift_variant', 'SPEN|p.P2295Qfs*58|1|0.17|ENSG00000065526|chr1:15933122-15933122|C/-|frameshift_variant', 'SPEN|p.N2410Kfs*46|1|0.12|ENSG00000065526|chr1:15933466-15933478|AGAATTCGTCCCA/-|frameshift_variant'] 48822 4288 KDSFHSSRDS True NCI_RA007_Epitope_Rep2 1164.51596415748 1164.5148699358601 21.318 2 -1.6362314171440375 0.43108167472037306 1.0 ['MAX|p.L46S|1|0.42|ENSG00000125952|chr14:65093742-65093742|A/G|missense_variant'] 69240 11546 LTSTPSPRSWP True H1975_Epitope_Rep3 1227.6247863304698 1227.62368993586 49.539 2 -1.636273594949735 0.4310832272670954 1.0 ['ENST00000497897.5_1_7:73151846-73153108:-|nuORF'] 97232 4212 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 23.166 2 -1.636313849150262 0.4310832272670954 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 93507 18922 RQKTRPLIPE True H1975_Epitope_Rep2 1236.7302544585198 1236.72859490379 78.552 3 -1.6363804518119147 0.4310847797438699 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'KDM4B-AKAP8L|1|fusion'] 29627 25198 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 105.62 3 -1.63646043220021 0.4310847797438699 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 16308 8924 EEGETSAQVK True H1975_Epitope_Rep3 1076.4985827578398 1076.4974899358601 39.324 2 -1.636516405161659 0.4310911876013696 1.0 ['ENST00000566334.1_1_16:56401340-56419833:-|nuORF'] 122653 20031 VGGAWGSVPQ True PC9_epitope_Rep5 956.4715801643599 956.4710349679301 82.101 1 -1.636540896083786 0.43109759531452385 1.0 ['ENST00000430886.5_1_22:38565377-38577774:-|nuORF'] 18221 5057 EINGIHDES True PC9_epitope_Rep5 1012.44615326216 1012.44504993586 24.479 2 -1.6366410190763019 0.43110555480470336 1.0 ['LMO7-ITGBL1|1|fusion', 'nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7', 'ENSG00000136153|ENST00000377534|LMO7', 'LMO7-ITGBL1|2|fusion', 'nc|ENSG00000136153|Q8WWI1-5|LMO7', 'ENST00000485987.1_1_13:76397799-76412346:+|nuORF'] 369 8406 AAKRNCIHHIL True NCI_RA007_Epitope_Rep3 1274.70299416486 1274.7018899358602 40.157 2 -1.636701103259425 0.43110555480470336 1.0 ['ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-3|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1'] 107699 22810 SVRSTTAL True PC9_epitope_Rep1 833.4606811274899 833.45958993586 92.551 2 -1.6367037994577276 0.43110555480470336 1.0 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 136996 8024 YAKLRKDDP True NCI_RA007_Epitope_Rep2 1104.5927579262 1104.5916699358602 35.842 2 -1.636826341563617 0.43112322472378334 1.0 ['ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN3|p.D206N|1|0.33|ENSG00000248746|chr11:66555188-66555188|G/A|missense_variant'] 132563 22231 VVEHVLPH True PC9_epitope_Rep6 928.51305105352 928.51194993586 98.469 2 -1.6370019306078518 0.43112963171528323 1.0 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 36043 12622 GVAAAGHA True NCI_RA007_Epitope_Rep3 652.3292730351201 652.32872496793 56.893 1 -1.6370205358334482 0.4311360385624669 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 34230 23230 GNPHKTSA True H1975_Epitope_Rep2 810.3984152241001 810.39730993586 95.818 2 -1.6371502655387495 0.43114244526533924 1.0 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000545752.1_1_12:122399919-122407612:+|nuORF'] 119115 8240 VAGWSLAK True NCI_RA007_Epitope_Rep5 830.46503823194 830.46394993586 38.375 2 -1.6371660430787651 0.43114885182390505 1.0 ['ENSG00000149639|ENST00000237536|SOGA1', 'SOGA1|p.R297Wfs*62|1|0.1|ENSG00000149639|chr20:36839234-36839240|GACCACG/-|frameshift_variant'] 10640 19363 CPIFYMRKKVR True NCI_RA007_Epitope_Rep2 1439.78936664111 1439.7882699358602 80.221 2 -1.6372021033035402 0.4311519533317567 1.0 ['ENSG00000062822|ENST00000440232|POLD1', 'ENST00000597963.5_1_19:50919583-50921201:+|nuORF', 'ENST00000596221.1_1_19:50920282-50921201:+|nuORF'] 94661 11309 RRWRYWEYWSW True PC9_epitope_Rep5 1772.83242811128 1772.8307849037901 48.492 3 -1.6373238415218467 0.4311519533317567 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 36047 13048 GVAAAGHA True NCI_RA007_Epitope_Rep5 652.3292730351201 652.32872496793 56.866 1 -1.6373252857821035 0.4311519533317567 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 22209 7396 ESWSEFYED True NCI_RA007_Epitope_Rep4 1190.44039917538 1190.4393099358601 35.09 2 -1.6373949379899069 0.4311519533317567 1.0 ['RBM26|p.H275Y|1|0.07|ENSG00000139746|chr13:79368802-79368802|G/A|missense_variant'] 30783 15011 GALVARPLWH True PC9_epitope_Rep4 1118.6348975217 1118.6338099358602 65.678 2 -1.6374567375614681 0.4311535039809007 1.0 ['ENST00000579053.5_1_18:691132-706776:-|nuORF'] 68116 9926 LTDPFLERITE True NCI_RA007_Epitope_Rep1 1332.6925315371197 1332.69142993586 42.613 2 -1.6374657855436707 0.4311535039809007 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 115403 24527 TRLIRHAI True NCI_RA007_Epitope_Rep3 978.6086827738599 978.60758993586 106.12 2 -1.6376790972148079 0.43115505456019637 1.0 ['ENSG00000172840|ENST00000311765|PDP2'] 110138 7478 TENEDHLAKEL True NCI_RA007_Epitope_Rep1 1297.6150094924099 1297.6139099358602 33.08 2 -1.6377077281005576 0.43115505456019637 1.0 ['nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B', 'nc|ENSG00000184588|Q07343-4|PDE4B', 'nc|ENSG00000184588|Q07343-2|PDE4B'] 48464 9772 KAASLCYLL True NCI_RA007_Epitope_Rep2 980.53648892004 980.5353899358599 42.632 2 -1.6377762647781393 0.4311614603274701 1.0 ['ENSG00000119927|ENST00000348367|GPAM'] 56267 7560 LCYIITHGDEK True H1975_Epitope_Rep1 1290.6278231055796 1290.62672993586 34.073 2 -1.637841695390676 0.4311678659504746 1.0 ['ENSG00000106631|ENST00000223364|MYL7'] 107798 22221 SVTKGRRL True PC9_epitope_Rep3 915.5613982282698 915.56030993586 90.759 2 -1.6379554695225393 0.43118553218323497 1.0 ['ENST00000286353.8_2_3:141012052-141012157:+|nuORF'] 56993 13872 LDRFHPRRYRH True NCI_RA007_Epitope_Rep1 1551.8283457903499 1551.8272499358602 57.98 2 -1.6379804416285133 0.43119193739091266 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1', 'ENST00000561370.5_1_14:68048786-68054020:+|nuORF'] 21837 20799 ESASELHK True H1975_Epitope_Rep3 899.4348603024699 899.43431496793 86.891 1 -1.6380175563946817 0.43122086345517197 1.0 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'CHD1L|p.R589Wfs*2|1|0.24|ENSG00000131778|chr1:147284408-147284426|ACAGAAAATCATTTGAACA/-|frameshift_variant', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 18577 10391 EKQFKAFRRGF True NCI_RA007_Epitope_Rep3 1412.7677025963997 1412.76660993586 47.93 2 -1.6381146062655927 0.43125619313575353 1.0 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 68974 11816 LTPISMYSL True H1975_Epitope_Rep1 1023.5310691864299 1023.5299699358601 50.446 2 -1.6381385699389164 0.43125619313575353 1.0 ['nc|ENSG00000151962|Q8TBY0-2|RBM46', 'nc|ENSG00000151962|Q8TBY0-3|RBM46', 'ENSG00000151962|ENST00000281722|RBM46'] 1766 16060 AEGTARQPLPI True PC9_epitope_Rep2 1151.6298717109098 1151.6287699358602 67.03 2 -1.6382236707609552 0.43127695269836624 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 10379 21573 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 93.532 2 -1.6382513663664962 0.43127695269836624 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 114456 21852 TPVRLTLLI True PC9_epitope_Rep5 1024.6644663144798 1024.6633699358601 89.089 2 -1.638293391446472 0.43127695269836624 1.0 ['INSRR|p.G930R|1|0.16|ENSG00000027644|chr1:156844230-156844230|C/T|missense_variant'] 58304 14975 LELWVNYYVRW True PC9_epitope_Rep6 1539.7874349814701 1539.78632993586 69.612 2 -1.638374038815754 0.43127695269836624 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 114107 11253 TPGGHRCS True H1975_Epitope_Rep3 813.35517051313 813.35462496793 48.387 1 -1.6383746242562376 0.43127695269836624 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 90959 16331 REYRGQRWIQS True PC9_epitope_Rep2 1477.7538434374098 1477.75274993586 68.065 2 -1.638528489657069 0.43130587519985586 1.0 ['ENST00000344726.9_2_6:79924698-79944311:-|nuORF'] 30517 8496 GAGKAGGH True H1975_Epitope_Rep1 653.32452200785 653.3239749679301 37.609 1 -1.6386136074005084 0.43131227833136293 1.0 ['ENST00000590830.5_1_19:1578341-1584901:-|nuORF'] 26137 6866 FGYLLYGN True PC9_epitope_Rep5 945.4596184983299 945.45852993586 31.381 2 -1.6386537243998038 0.43131382505601407 1.0 ['CON__Q2KIU3'] 103501 13290 SPQQTVTI True NCI_RA007_Epitope_Rep3 872.4603467743199 872.45924993586 59.544 2 -1.6386874010281642 0.43131382505601407 1.0 ['TAF4B|p.R137I|1|0.24|ENSG00000141384|chr18:26265236-26265236|G/T|missense_variant'] 55690 18427 LALFTHST True NCI_RA007_Epitope_Rep4 888.4705175352 888.46942993586 79.746 2 -1.6388113416926486 0.4313202278817357 1.0 ['ENST00000498793.5_1_1:41503212-41512322:-|nuORF'] 126644 20500 VLNQATGH True NCI_RA007_Epitope_Rep5 838.4297153523801 838.42860993586 85.798 2 -1.6388495852318088 0.43133788941555296 1.0 ['ENSG00000085998|ENST00000371984|POMGNT1', 'nc|ENSG00000085998|Q8WZA1-2|POMGNT1', 'ENST00000489985.1_1_1:46661446-46663526:-|nuORF'] 110903 4959 TGVKTRAQ True PC9_epitope_Rep5 859.4875645816699 859.48646993586 24.11 2 -1.6390240990637714 0.4313780680027021 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD'] 582 25329 AARLLFMSIKW True PC9_epitope_Rep2 1334.75329840222 1334.75220993586 103.1 2 -1.6391166544781786 0.4313957284876324 1.0 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 10648 10928 CPMLQNLA True NCI_RA007_Epitope_Rep4 888.41974491564 888.41864993586 48.895 2 -1.6391556073687827 0.43140213010290246 1.0 ['ENST00000218789.9_3_13:111957024-111957249:+|nuORF'] 83000 23446 PSGLKPPGRG True PC9_epitope_Rep2 964.5454138109599 964.54430993586 95.657 2 -1.639168644745034 0.43140853157402925 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 121446 11717 VEWQEDFRELF True H1975_Epitope_Rep3 1496.6935941662798 1496.69248993586 50.211 2 -1.6392215062550741 0.43141007599211934 1.0 ['nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 77975 5832 NVPDLMDEFI True PC9_epitope_Rep6 1191.54817580255 1191.54652490379 30.647 3 -1.6392381611324118 0.43141007599211934 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1', 'ENST00000554652.5_1_14:36147090-36221314:-|nuORF'] 24190 6091 EYQREGIPW True H1975_Epitope_Rep3 1176.5563724174797 1176.55526993586 28.441 2 -1.6393527328880046 0.4314228781789321 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 135987 21592 WQPLPLHR True PC9_epitope_Rep2 1045.58213367285 1045.5810299358602 88.525 2 -1.6393545209383857 0.4314228781789321 1.0 ['ENST00000348520.10_2_14:104168248-104168920:+|nuORF'] 48590 26699 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 111.18 3 -1.6394775916794064 0.431435679789258 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 6702 11358 AQAKVQKMNL True PC9_epitope_Rep4 1129.62776353593 1129.62610490379 51.463 3 -1.6395076078879876 0.431435679789258 1.0 ['ENST00000549041.1_1_12:51634351-51634513:+|nuORF'] 80361 21873 PGGVRPPQ True PC9_epitope_Rep6 806.43988611326 806.43878993586 97.035 2 -1.6395613505498758 0.4314420803782506 1.0 ['ENST00000468101.5_1_3:183353437-183368104:+|nuORF'] 48606 26357 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 108.45 3 -1.6396201193659474 0.43145488112391933 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 59233 18230 LFERQMLKEER True NCI_RA007_Epitope_Rep1 1477.7711332943302 1477.77002993586 75.053 2 -1.6396303337643379 0.43145488112391933 1.0 ['ENSG00000106246|ENST00000292478|PTCD1', 'ENST00000485746.1_1_7:99030561-99032532:-|nuORF'] 11084 13417 DCDRTSGQ True NCI_RA007_Epitope_Rep5 880.3344946381999 880.3333899358599 58.293 2 -1.6398425432562662 0.4314804808861272 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant'] 48612 26788 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 110.48 3 -1.6398653891680035 0.4314804808861272 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 62413 23452 LLGYEIRYWK True PC9_epitope_Rep4 1339.72885747619 1339.72720490379 98.494 3 -1.6398787294425243 0.4314804808861272 1.0 ['ENSG00000184144|ENST00000331830|CNTN2'] 61439 20544 LIWEVLWV True PC9_epitope_Rep1 1056.60080342876 1056.5997099358601 83.834 2 -1.6399394094401618 0.4314804808861272 1.0 ['ENST00000216733.7_1_14:23834263-23834767:-|nuORF'] 125385 13114 VIRSCQNDEL True PC9_epitope_Rep2 1175.5604718217498 1175.55936993586 55.718 2 -1.6400187504792556 0.43149636433218524 1.0 ['ENSG00000187871|ENST00000340465|GFRAL'] 4569 9295 AKPELSLSK True H1975_Epitope_Rep3 971.56514619603 971.56404993586 40.748 2 -1.6401060027045704 0.43149636433218524 1.0 ['ENST00000383686.2_1_3:110611078-110612293:-|nuORF'] 27962 15797 FQEYYRQRLRY True PC9_epitope_Rep4 1620.8161093407998 1620.8144549037902 68.688 3 -1.6401165151481112 0.43149636433218524 1.0 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 62318 3493 LLGECAVP True NCI_RA007_Epitope_Rep2 800.4102257777599 800.40912993586 18.239 2 -1.6401809533361171 0.43149636433218524 1.0 ['ENST00000571156.1_1_17:78181480-78183436:-|nuORF', 'ENST00000326317.10_1_17:78183109-78183520:-|nuORF'] 91351 5045 RGWIGEIEVAP True NCI_RA007_Epitope_Rep1 1225.64552177505 1225.64386490379 23.708 3 -1.640230122856104 0.43149636433218524 1.0 ['ENST00000592852.1_2_19:45910006-45910240:+|nuORF'] 38776 12060 HGTVFSSF True PC9_epitope_Rep5 880.40791727864 880.40682993586 51.384 2 -1.6402679292185038 0.43149636433218524 1.0 ['ENST00000565698.5_2_16:28192347-28222689:-|nuORF'] 72592 14437 MLRWKDFP True PC9_epitope_Rep2 1091.5586213469498 1091.5575299358602 60.8 2 -1.6403431513157298 0.4315219593453841 1.0 ['ENST00000525662.1_1_11:111234616-111234697:-|nuORF'] 55765 22486 LALYFLFA True PC9_epitope_Rep3 956.5371405430399 956.53604993586 91.767 2 -1.6404015214916337 0.4315219593453841 1.0 ['ENSG00000140931|ENST00000567572|CMTM3'] 4994 10098 ALHNPLPK True NCI_RA007_Epitope_Rep1 888.51813643396 888.51702993586 43.29 2 -1.6404142455629867 0.4315219593453841 1.0 ['ENSG00000092330|ENST00000267415|TINF2', 'nc|ENSG00000092330|Q9BSI4-2|TINF2'] 127849 10679 VPFPSIKN True PC9_epitope_Rep6 900.5069030439199 900.50580993586 51.892 2 -1.6404283552437608 0.4315219593453841 1.0 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD', 'ENST00000469841.5_1_3:57131519-57204269:-|nuORF'] 49217 11794 KENLGWQKL True NCI_RA007_Epitope_Rep4 1114.61349337078 1114.6123899358602 52.34 2 -1.6404590952316287 0.43152835773858433 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 122151 22087 VGAGHGAG True PC9_epitope_Rep4 624.29797290684 624.29742496793 93.174 1 -1.640736090444079 0.4315378382028542 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 106337 11254 STGPKKPRM True PC9_epitope_Rep4 1000.5487849392399 1000.54768993586 51.062 2 -1.6407393129022283 0.4315378382028542 1.0 ['ENST00000392177.8_1_6:159188516-159190383:-|nuORF'] 48605 26141 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 107.43 3 -1.6407804156186818 0.4315378382028542 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 141718 10559 YTVRNKDVK True PC9_epitope_Rep1 1121.61930702721 1121.61820993586 45.506 2 -1.6407946671426354 0.4315378382028542 1.0 ['nc|ENSG00000176290|Q96R72|OR4K3'] 35207 25883 GRALWHLRLA True PC9_epitope_Rep1 1191.69889476059 1191.6972449037899 104.67 3 -1.6408130880058696 0.4315378382028542 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 108977 9562 TAFRSITAQP True NCI_RA007_Epitope_Rep3 1090.5771078620598 1090.5760099358602 44.697 2 -1.640857935972467 0.4315442359852791 1.0 ['ENST00000605810.1_1_3:70174691-70175321:-|nuORF'] 48442 10515 IYYLVRWGQFL True NCI_RA007_Epitope_Rep1 1456.7867067054797 1456.78560993586 44.884 2 -1.6409058746220901 0.43154577682741546 1.0 ['ENST00000465893.1_1_6:41037763-41039373:-|nuORF'] 130416 13906 VSLSQPRTL True PC9_epitope_Rep4 999.5712942056299 999.57018993586 61.393 2 -1.6409371268037893 0.43154577682741546 1.0 ['ENSG00000090006|ENST00000396819|LTBP4', 'nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4', 'ENST00000595529.1_1_19:41112383-41114583:+|nuORF'] 93300 22230 RPRRYRAP True PC9_epitope_Rep3 1070.62097879306 1070.61988993586 90.792 2 -1.6410419082746661 0.43154731760018905 1.0 ['ENSG00000185372|ENST00000641551|OR2V1'] 98525 5006 SFMGYLRIFSP True H1975_Epitope_Rep3 1316.6587293110397 1316.65762993586 24.381 2 -1.6410479136369212 0.43154731760018905 1.0 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9'] 94414 24103 RRRRNQDV True PC9_epitope_Rep2 1098.61187066134 1098.6107699358602 98.213 2 -1.641125851084576 0.43158084263593804 1.0 ['nc|ENSG00000133083|O15075-4|DCLK1', 'ENSG00000133083|ENST00000360631|DCLK1'] 80356 16186 PGGRARPA True H1975_Epitope_Rep2 780.4354694391599 780.43436993586 67.469 2 -1.6411691216824846 0.43158084263593804 1.0 ['ENST00000345057.8_1_16:67189180-67190534:-|nuORF'] 53711 24568 KSILKITK True NCI_RA007_Epitope_Rep3 929.62735252977 929.62624993586 106.28 2 -1.6412258222697047 0.43158084263593804 1.0 ['ENSG00000138615|ENST00000261883|CILP'] 3448 22604 AGKVGELCAGK True PC9_epitope_Rep1 1031.5433652056297 1031.54277496793 91.756 1 -1.641234503927987 0.43158084263593804 1.0 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 119810 22693 VDAIKRSSR True PC9_epitope_Rep4 1030.5883412521 1030.5872499358602 95.516 2 -1.641297890867788 0.43158084263593804 1.0 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 101779 13728 SLPAAGGW True PC9_epitope_Rep1 757.37588887437 757.37478993586 57.653 2 -1.6414596064598146 0.43158084263593804 1.0 ['ENST00000355977.10_1_1:67390688-67391875:+|nuORF'] 74533 13753 NFPQFPETL True PC9_epitope_Rep4 1091.5287606873098 1091.52766993586 60.797 2 -1.6415201271845519 0.43158084263593804 1.0 ['ENSG00000117501|ENST00000367759|MROH9', 'nc|ENSG00000117501|Q5TGP6|MROH9'] 24253 8790 EYSRKEVP True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 38.652 2 -1.6416477901104636 0.431620998143251 1.0 ['ENSG00000187889|ENST00000343433|FYB2', 'ENST00000493000.5_1_1:57206466-57216840:-|nuORF'] 26653 10010 FIQPNMRL True PC9_epitope_Rep3 1017.54297128281 1017.54186993586 43.458 2 -1.641733091193716 0.43163378982074335 1.0 ['ENSG00000128059|ENST00000264220|PPAT', 'ENST00000425339.2_1_4:57261520-57265668:-|nuORF'] 76632 22447 NQRIQTVI True PC9_epitope_Rep6 970.5559784946599 970.55488993586 99.338 2 -1.6417972385316528 0.43163378982074335 1.0 ['ENST00000492143.5_1_7:148514953-148515082:-|nuORF', 'ENST00000460911.5_1_7:148514453-148515082:-|nuORF'] 5484 18782 ALWNRTAG True PC9_epitope_Rep4 887.4613498338299 887.46024993586 80.33 2 -1.642010071071303 0.43164124026821477 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 39547 24398 HLGAVGGG True PC9_epitope_Rep2 666.34492309926 666.3443749679301 99.416 1 -1.6420248414197318 0.43164124026821477 1.0 ['nc|ENSG00000241258|O75575-3|CRCP'] 114467 8313 TPWLQRTEP True NCI_RA007_Epitope_Rep4 1126.5771078620598 1126.5760099358602 38.791 2 -1.6420470117588306 0.43164124026821477 1.0 ['ENST00000359866.8_1_19:17431114-17431327:+|nuORF'] 62680 17661 LLLLFLVLRG True PC9_epitope_Rep3 1155.7743511166298 1155.7726949037901 73.123 3 -1.6421176250686982 0.43164124026821477 1.0 ['ENSG00000143552|ENST00000368559|NUP210L', 'nc|ENSG00000143552|Q5VU65-2|NUP210L'] 93028 16955 RPLKAINR True PC9_epitope_Rep6 966.60868277386 966.60758993586 77.762 2 -1.6421973094886766 0.43164124026821477 1.0 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 20138 7105 ENARRYAK True H1975_Epitope_Rep1 1006.5308263759798 1006.52972993586 32.354 2 -1.6421990301246603 0.43164124026821477 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7', 'MCM7|p.P175Tfs*11|1|0.29|ENSG00000166508|chr7:100099082-100099083|-/T|frameshift_variant', 'ENST00000463722.5_1_7:99697202-99698956:-|nuORF'] 58506 5254 LEQELQPDL True H1975_Epitope_Rep3 1083.54480467427 1083.54370993586 25.295 2 -1.6422315859581924 0.43164124026821477 1.0 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-5|CDH26', 'nc|ENSG00000124215|Q8IXH8-2|CDH26'] 20681 5889 EQDLVWKFRYY True NCI_RA007_Epitope_Rep2 1545.76161415645 1545.76050993586 27.522 2 -1.6422538461001208 0.43164124026821477 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 125687 2175 VKNCLDYHISV True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 11.662 3 -1.6422778904955253 0.43164124026821477 1.0 ['ENST00000567330.1_1_16:75743035-75743521:-|nuORF'] 15841 20965 EDEQRSPNLA True PC9_epitope_Rep5 1157.5312798684502 1157.53018993586 85.702 2 -1.6423680628460042 0.43164124026821477 1.0 127343 21504 VMPFLMTV True PC9_epitope_Rep4 936.4812825430399 936.48018993586 90.896 2 -1.6423876071318488 0.43164124026821477 1.0 ['ENST00000371157.7_1_X:123184100-123184130:+|nuORF'] 19503 8818 ELPHLRNP True PC9_epitope_Rep3 974.52976374682 974.52866993586 38.868 2 -1.642479602608922 0.43164124026821477 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 64304 23326 LPKLSCGVK True PC9_epitope_Rep1 943.5524733373499 943.5519249679301 94.514 1 -1.6425408358510487 0.43164124026821477 1.0 ['CON__Q32PI4', 'CFI|p.E507Rfs*9|1|0.47|ENSG00000205403|chr4:109742506-109742507|-/T|frameshift_variant', 'ENSG00000205403|ENST00000394634|CFI'] 16539 11214 EELQMTRML True NCI_RA007_Epitope_Rep4 1149.55221563717 1149.55110993586 50.023 2 -1.642582158660018 0.43164124026821477 1.0 ['ENST00000313755.9_1_22:18900690-18907344:-|nuORF', 'nc|ENSG00000100033|O43272-2|PRODH', 'nc|ENSG00000100033|O43272-1|PRODH', 'ENSG00000100033|ENST00000357068|PRODH', 'ENST00000429300.5_1_22:18905996-18910521:-|nuORF', 'ENST00000609229.1_1_22:18904401-18907344:-|nuORF', 'ENST00000438948.1_1_22:20287467-20300466:+|nuORF'] 105432 21340 SRTNLSSMEL True PC9_epitope_Rep2 1136.54957278488 1136.54846993586 87.551 2 -1.6427152319289382 0.43164124026821477 1.0 ['nc|ENSG00000171208|Q8NC67-2|NETO2', 'nc|ENSG00000171208|Q8NC67-3|NETO2', 'ENSG00000171208|ENST00000562435|NETO2'] 80700 18765 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 79.012 2 -1.6427822808584795 0.43164124026821477 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 86342 18577 QIYRLRPQKR True NCI_RA007_Epitope_Rep5 1356.8102361147196 1356.80912993586 78.277 2 -1.6427825976129855 0.43164124026821477 1.0 ['ENST00000430420.5_1_X:54948679-54949098:+|nuORF'] 8829 7596 AVEEYVYDFRD True PC9_epitope_Rep2 1404.6197605196796 1404.61866993586 34.588 2 -1.6428266108732927 0.43164763458401306 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 69769 25197 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 105.61 3 -1.642932608867868 0.43167652948720836 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 63308 8260 LLSTVAAV True H1975_Epitope_Rep2 772.4694549060399 772.46834993586 36.724 2 -1.6430161748159415 0.4316829232621193 1.0 ['ENSG00000106688|ENST00000262352|SLC1A1'] 28132 19473 FRCQWINLP True PC9_epitope_Rep2 1175.59098410439 1175.5898899358601 80.282 2 -1.6430670545318138 0.43170056700567006 1.0 ['AAAS|p.G40C|1|0.05|ENSG00000094914|chr12:53321348-53321348|C/A|missense_variant'] 56744 19917 LDLLILVTMKH True NCI_RA007_Epitope_Rep5 1294.76827976002 1294.76662490379 83.524 3 -1.6433022481610942 0.4317407103241121 1.0 ['ENST00000446230.6_1_11:94278904-94308218:+|nuORF'] 128720 21670 VPWQPPGP True NCI_RA007_Epitope_Rep5 876.4493881677998 876.44828993586 90.452 2 -1.6435218463147965 0.4317534958544735 1.0 ['ENSG00000260734|ENST00000561754|TLE7'] 56177 12613 LAWFWNERFWL True H1975_Epitope_Rep1 1566.77720465094 1566.7761099358602 53.565 2 -1.6435380468605516 0.4317534958544735 1.0 ['CERS6|p.A254Cfs*8|1|0.45|ENSG00000172292|chr2:168717891-168717892|-/T|frameshift_variant', 'ENSG00000172292|ENST00000305747|CERS6', 'nc|ENSG00000172292|Q6ZMG9-2|CERS6'] 116059 20592 TSPPGTVM True PC9_epitope_Rep6 788.37384026904 788.37274993586 91.936 2 -1.6435877902066165 0.4317614237181362 1.0 ['ENST00000372004.7_1_20:46282573-46282858:+|nuORF'] 63647 12479 LMPWLILEL True PC9_epitope_Rep4 1126.64603936902 1126.64440490379 55.808 3 -1.6437850374165965 0.4317614237181362 1.0 ['ENST00000256689.9_1_12:46761121-46764364:-|nuORF'] 69773 26044 LVFRKPRGLFI True PC9_epitope_Rep5 1344.8394109846797 1344.83776490379 105.78 3 -1.6438843769091418 0.4317614237181362 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 11985 10107 DHPYTAFTHA True PC9_epitope_Rep4 1158.5094222250602 1158.50832993586 46.548 2 -1.6440653097582203 0.43177906518926823 1.0 ['PRUNE2|p.D1971Y|1|0.32|ENSG00000106772|chr9:76706363-76706363|C/A|missense_variant'] 110554 25592 TFPVKGLK True PC9_epitope_Rep3 888.5432885526399 888.54218993586 103.93 2 -1.6442211606143076 0.4317967062634989 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 128882 7331 VQERWYALLYD True H1975_Epitope_Rep1 1454.7194149912998 1454.7183099358601 33.207 2 -1.6443888399936042 0.4318255959143728 1.0 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 112552 21962 TLEEKRKMT True NCI_RA007_Epitope_Rep3 1134.60669373818 1134.60505490379 95.423 3 -1.6444151510299811 0.43183198722130983 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 123863 1261 VGRQVSHHYGY True H1975_Epitope_Rep1 1301.6265176659701 1301.6248649037902 6.5698 3 -1.6445175450823697 0.4318493689964682 1.0 ['ENST00000441747.6_1_19:1482202-1488015:-|nuORF', 'ENSG00000115257|ENST00000300954|PCSK4', 'ENST00000591201.5_1_19:1482125-1483918:-|nuORF'] 127892 22047 VPGKMKVA True PC9_epitope_Rep1 828.4891448047998 828.48804993586 89.619 2 -1.6445301558402945 0.4318493689964682 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'ATAD5|p.N1157Pfs*17|1|0.06|ENSG00000176208|chr17:30869507-30869508|-/CCTTT|frameshift_variant', 'nc|ENSG00000176208|Q96QE3-2|ATAD5', 'ATAD5|p.K970Nfs*32|1|0.2|ENSG00000176208|chr17:30858271-30858271|A/-|frameshift_variant'] 30859 9196 GAPLSHLT True PC9_epitope_Rep1 794.4286527232201 794.42754993586 40.223 2 -1.644588557706097 0.4318493689964682 1.0 ['ENST00000481170.1_1_2:220364697-220365012:+|nuORF'] 23317 15731 EVQRIRHEFRD True NCI_RA007_Epitope_Rep1 1483.7644081211095 1483.7633099358602 65.285 2 -1.6446258389831965 0.4318493689964682 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'nc|ENSG00000177595|Q9HB75-4|PIDD1', 'ENST00000524486.5_1_11:799309-803120:-|nuORF'] 68008 14806 LTDHPRWI True PC9_epitope_Rep2 1036.5454138109599 1036.5443099358602 62.216 2 -1.6447176595422808 0.4318493689964682 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 17070 16497 EGIAEWLRRR True NCI_RA007_Epitope_Rep2 1284.7051023398399 1284.70400993586 68.897 2 -1.6447357497706854 0.4318493689964682 1.0 ['nc|ENSG00000185615|Q13087-2|PDIA2', 'ENSG00000185615|ENST00000219406|PDIA2', 'ENST00000482665.1_1_16:334415-335240:+|nuORF'] 119152 8694 VAILRDAEFYE True H1975_Epitope_Rep3 1324.66631678928 1324.6646849037902 38.441 3 -1.6447671026865243 0.4318493689964682 1.0 ['ENSG00000198682|ENST00000456849|PAPSS2', 'nc|ENSG00000198682|O95340|PAPSS2', 'PAPSS2|p.G541Wfs*26|1|0.67|ENSG00000198682|chr10:87745140-87745141|-/C|frameshift_variant'] 68677 3576 LTKELMPRF True NCI_RA007_Epitope_Rep2 1133.6267009067699 1133.62504490379 18.56 3 -1.644781831568826 0.4318493689964682 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 77106 12251 NRLVMGGP True H1975_Epitope_Rep2 842.4432572415399 842.44214993586 52.205 2 -1.6448059580383172 0.43185396796832826 1.0 ['ENST00000602076.5_1_19:49949641-49950083:-|nuORF', 'ENST00000595633.5_1_19:49949641-49950433:-|nuORF', 'ENSG00000104872|ENST00000262265|PIH1D1'] 112881 24145 TLKLQKKARK True PC9_epitope_Rep3 1212.8030254759599 1212.80137490379 98.157 3 -1.6448235782700962 0.43185396796832826 1.0 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 33908 14779 GLQMASRYTV True PC9_epitope_Rep4 1124.5648289261999 1124.56372993586 64.778 2 -1.6448677670315073 0.43185396796832826 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 5584 7429 ANGGLRHLR True NCI_RA007_Epitope_Rep2 992.5627952105999 992.56168993586 33.524 2 -1.644875580083209 0.43185396796832826 1.0 ['ENST00000265753.12_1_7:73588685-73601976:+|nuORF'] 20292 8276 ENSLTETHK True PC9_epitope_Rep1 1057.50400249145 1057.50290993586 36.667 2 -1.645053593377222 0.43185396796832826 1.0 ['ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.A1643Hfs*5|1|0.12|ENSG00000155816|chr1:240438076-240438076|G/-|frameshift_variant', 'nc|ENSG00000155816|Q9NZ56-2|FMN2'] 88087 21473 QRRQQVFRR True PC9_epitope_Rep6 1272.7275691199197 1272.72592490379 95.474 3 -1.6450873184262969 0.43185396796832826 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 41001 22096 HTFDRYRSQ True PC9_epitope_Rep1 1208.5686684366801 1208.56756993586 89.805 2 -1.6452314795295682 0.4319053456749857 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 124924 20585 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 85.273 2 -1.6453371557531702 0.4319229817576535 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 80428 21936 PGKPGKRLV True H1975_Epitope_Rep2 950.6025347642599 950.60142993586 90.698 2 -1.6455173551883877 0.4319533947389138 1.0 ['ENST00000392754.7_2_10:126431146-126431500:-|nuORF'] 34227 23644 GNNKKAPLN True PC9_epitope_Rep4 954.5246783663799 954.52358993586 99.29 2 -1.6455249745570861 0.4319533947389138 1.0 ['ENSG00000111727|ENST00000229330|HCFC2'] 63977 16277 LNVKGKRTL True PC9_epitope_Rep5 1027.6502132326698 1027.64910993586 67.603 2 -1.645539028196197 0.4319533947389138 1.0 ['ENSG00000102174|ENST00000379374|PHEX'] 139870 13057 YPQEDYESF True H1975_Epitope_Rep2 1176.46113461996 1176.4600299358601 55.347 2 -1.6457125845575897 0.43197076187798705 1.0 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A', 'ENST00000568515.1_1_15:66007788-66048788:-|nuORF'] 130647 6301 VSTDYWLY True PC9_epitope_Rep5 1045.4756624852898 1045.47456993586 29.212 2 -1.6458265626621806 0.43197076187798705 1.0 ['ENSG00000105605|ENST00000391767|CACNG7', 'ENSG00000075429|ENST00000533854|CACNG5'] 107794 17376 SVTIFFENNW True PC9_epitope_Rep5 1255.5873381925899 1255.58624993586 71.837 2 -1.6458409072501285 0.43197076187798705 1.0 ['ENSG00000129245|ENST00000250113|FXR2'] 59668 10348 LGALAARFP True H1975_Epitope_Rep2 914.5337864981 914.5332349679301 44.813 1 -1.645868401863164 0.43197076187798705 1.0 ['ENST00000348261.10_1_16:1271144-1271678:+|nuORF'] 113089 15500 TLNRQKYRHVD True PC9_epitope_Rep4 1428.75859446468 1428.7574899358601 67.546 2 -1.6459356304702744 0.43197076187798705 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 91606 8729 RILQKLIKPP True PC9_epitope_Rep4 1204.8019628467998 1204.8008699358602 41.08 2 -1.6459381310757173 0.43197076187798705 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 2603 8306 AERMVSMAWL True H1975_Epitope_Rep2 1192.5732854349199 1192.57218993586 36.9 2 -1.6459513471255542 0.43197076187798705 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 65349 18397 LRDGRQVGR True PC9_epitope_Rep5 1055.59482361487 1055.59427496793 75.783 1 -1.6460821306323066 0.43197076187798705 1.0 ['ENST00000465315.1_1_2:131099287-131099515:-|nuORF'] 124155 7916 VGSSPHLP True NCI_RA007_Epitope_Rep3 792.41300265908 792.41190993586 38.248 2 -1.64621935545207 0.431977149540067 1.0 ['ENSG00000100426|ENST00000216268|ZBED4', 'ZBED4|p.M454Gfs*31|1|0.13|ENSG00000100426|chr22:49885022-49885041|ATGAAAAGACTGAAGTCGGA/-|frameshift_variant'] 124445 13180 VGVGSHAA True NCI_RA007_Epitope_Rep3 696.3554877829599 696.35493496793 59.116 1 -1.6462818252201723 0.4320060274157455 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 110385 15077 TEVLAALL True NCI_RA007_Epitope_Rep5 828.4956696538799 828.49456993586 64.661 2 -1.6464027546039397 0.4320236595897805 1.0 ['ENSG00000273540|ENST00000614907|AGBL1', 'nc|ENSG00000273540|Q96MI9|AGBL1', 'AGBL1|p.V276Wfs*10|1|0.22|ENSG00000273540|chr15:86258020-86258020|G/-|frameshift_variant'] 55470 4112 LAGASPLH True NCI_RA007_Epitope_Rep5 764.4180880395202 764.41698993586 22.304 2 -1.646443614341918 0.4320364331496683 1.0 ['ENST00000360121.4_1_16:29677771-29678056:+|nuORF'] 80439 23277 PGKRHWLKV True PC9_epitope_Rep4 1119.6665320031498 1119.6654299358602 97.787 2 -1.646511003119352 0.4320364331496683 1.0 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'ENST00000593099.5_1_17:33325156-33325826:+|nuORF'] 108448 8480 SYLPSIKEPER True PC9_epitope_Rep5 1317.69286589029 1317.69121490379 37.56 3 -1.6465633184196984 0.43204434799230884 1.0 ['ENSG00000165325|ENST00000298050|DEUP1', 'nc|ENSG00000165325|Q05D60-2|DEUP1'] 122006 11631 VFVIAGAT True NCI_RA007_Epitope_Rep2 776.4432401582 776.44214993586 49.835 2 -1.6466193501971322 0.43204434799230884 1.0 ['VPS45|p.G508A|1|0.04|ENSG00000136631|chr1:150110525-150110525|G/C|missense_variant'] 35303 24709 GRKKHLPARL True PC9_epitope_Rep4 1174.74109392574 1174.7399899358602 103.54 2 -1.6466581454240787 0.43204434799230884 1.0 ['ENST00000477661.1_1_10:5005492-5009304:+|nuORF'] 123627 4576 VGQGLGQV True NCI_RA007_Epitope_Rep3 756.41300265908 756.41190993586 24.886 2 -1.6467205306443378 0.43204587620172036 1.0 ['ENST00000256367.2_1_14:71138606-71138684:+|nuORF'] 125235 24656 VIKIHDINYN True NCI_RA007_Epitope_Rep1 1227.6611718391898 1227.65953490379 102.1 3 -1.6467811154551162 0.43204587620172036 1.0 ['CDH10|p.D155Y|1|0.19|ENSG00000040731|chr5:24537443-24537443|C/A|missense_variant'] 98791 24002 SGKSRLVQL True PC9_epitope_Rep2 986.58727862294 986.58618993586 97.819 2 -1.646887402069281 0.4320635063416389 1.0 ['nc|ENSG00000203880|Q9NV79-2|PCMTD2', 'ENSG00000203880|ENST00000308824|PCMTD2'] 84006 16116 PVSVQIPTG True PC9_epitope_Rep1 896.4967322830399 896.49618496793 66.806 1 -1.646938948392901 0.4320698921708625 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1', 'ENST00000549154.1_1_12:53683840-53684149:+|nuORF'] 30803 11437 GANRGLRLW True PC9_epitope_Rep1 1041.5831963020098 1041.58208993586 48.87 2 -1.6471642292179511 0.4320714197371232 1.0 ['ENST00000259523.10_1_8:128748561-128748855:+|nuORF'] 70675 5491 LWHTYRWLLL True PC9_epitope_Rep3 1399.7764763749499 1399.7748449037902 26.197 3 -1.6471729068259082 0.4320714197371232 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 2012 13240 AEIVAAEK True PC9_epitope_Rep4 829.45453311789 829.4539849679301 58.824 1 -1.6473237436826735 0.43209543405178713 1.0 ['nc|ENSG00000180881|Q9BXY5|CAPS2', 'ENSG00000180881|ENST00000699294|CAPS2', 'nc|ENSG00000180881|Q9BXY5-5|CAPS2'] 77652 19335 NTHKETLA True NCI_RA007_Epitope_Rep3 912.4664947839199 912.46538993586 84.408 2 -1.647348029288447 0.43209543405178713 1.0 ['ZNF75D|p.Q196Lfs*5|1|0.13|ENSG00000186376|chrX:135292298-135292299|-/A|frameshift_variant'] 37331 14717 GVSEIPSTCT True PC9_epitope_Rep5 992.4484617612801 992.44791496793 61.608 1 -1.6475671466441613 0.43214679229160574 1.0 ['ENST00000506025.1_2_5:176922079-176930550:+|nuORF'] 25921 23914 FFRLFRSTVK True NCI_RA007_Epitope_Rep4 1299.74517624667 1299.74353490379 103.72 3 -1.647839229226347 0.43216441990938015 1.0 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 20089 26170 EMHLLEVF True NCI_RA007_Epitope_Rep5 1016.50010341132 1016.49900993586 108.25 2 -1.6480392126361516 0.4321881464160446 1.0 ['ENST00000539909.5_1_10:76429943-76468111:+|nuORF'] 47005 16431 ITQRDYGR True PC9_epitope_Rep1 1007.5148419586699 1007.51374993586 68.025 2 -1.648050898141361 0.4321881464160446 1.0 ['PXDNL|p.H393Y|1|0.15|ENSG00000147485|chr8:51453591-51453591|G/A|missense_variant'] 61559 22995 LKIIEKAC True PC9_epitope_Rep3 916.54157430048 916.54046993586 93.717 2 -1.6482351228669367 0.4321881464160446 1.0 ['ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-3|LTN1', 'LTN1|p.L1453Ffs*13|1|0.6|ENSG00000198862|chr21:28941343-28941344|-/A|frameshift_variant', 'LTN1|p.W1583*|1|0.08|ENSG00000198862|chr21:28935235-28935235|C/-|frameshift_variant', 'LTN1|p.E988Nfs*4|1|0.24|ENSG00000198862|chr21:28956879-28956879|C/-|frameshift_variant'] 80699 17473 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 73.996 2 -1.6482614056735945 0.4321881464160446 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 69762 26614 LVFRKPRGLFI True NCI_RA007_Epitope_Rep5 1344.8394109846797 1344.83776490379 110.03 3 -1.6482860926873293 0.4321881464160446 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 94851 22891 RSTVLNEHKKI True PC9_epitope_Rep6 1323.7622828627898 1323.76118993586 101.16 2 -1.6483127572832696 0.4321881464160446 1.0 ['ENST00000380882.5_4:85656-87337:+|nuORF', 'ENSG00000272602|ENST00000610261|ZNF595'] 37563 12793 GVVNVRLC True PC9_epitope_Rep5 858.4745573698199 858.47346993586 54.219 2 -1.6483957594955143 0.4321881464160446 1.0 ['ENSG00000083457|ENST00000263087|ITGAE', 'ITGAE|p.E708Q|1|0.21|ENSG00000083457|chr17:3747955-3747955|C/G|missense_variant'] 50063 24631 KKFSRREH True PC9_epitope_Rep1 1086.6046600225798 1086.6035699358602 99.618 2 -1.6484007808719494 0.4321881464160446 1.0 ['ZNF341|p.F603S|1|0.05|ENSG00000131061|chr20:33783820-33783820|T/C|missense_variant'] 34220 17124 GNLEWLHL True NCI_RA007_Epitope_Rep4 980.50796567308 980.50686993586 74.184 2 -1.6484153803022645 0.4321881464160446 1.0 ['nc|ENSG00000171804|Q6ZQQ6|WDR87', 'nc|ENSG00000171804|Q6ZQQ6-2|WDR87', 'ENSG00000171804|ENST00000447313|WDR87'] 111507 10978 THYKAPRMV True PC9_epitope_Rep4 1101.5753340402498 1101.57422993586 50.001 2 -1.6485548770782916 0.4322057715872427 1.0 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1'] 24913 25795 FCDVHPVL True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 106.77 2 -1.6486311544531504 0.43221853746276206 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4S2|p.H241Tfs*40|1|0.3|ENSG00000174982|chr11:55651622-55651622|C/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 45576 4637 IQSYWRGYLMR True H1975_Epitope_Rep1 1471.7394392432298 1471.73779490379 22.866 3 -1.6487410847402457 0.43221853746276206 1.0 ['LRRIQ1|p.S1543Ifs*14|1|0.13|ENSG00000133640|chr12:85153747-85153748|-/ATCTTGAAAGGCAATAAAAGTC|frameshift_variant', 'nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1'] 1495 4420 AEELLGSL True NCI_RA007_Epitope_Rep5 830.43854870058 830.43744993586 23.634 2 -1.648898900222549 0.432260167719598 1.0 ['ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 30495 20484 GAGDLGGF True NCI_RA007_Epitope_Rep5 692.31295426464 692.3124049679301 85.737 1 -1.6489123446735279 0.432260167719598 1.0 ['ENST00000246672.3_1_17:38251239-38251841:-|nuORF'] 81381 5143 PLDPVLRAP True NCI_RA007_Epitope_Rep3 976.5705659296399 976.56946993586 27.222 2 -1.6489892857790807 0.432260167719598 1.0 ['ENSG00000157637|ENST00000374759|SLC38A10'] 64506 14946 LPQTPASVP True PC9_epitope_Rep5 908.4967322830399 908.49618496793 62.492 1 -1.6492155102236046 0.4322662590202999 1.0 ['nc|ENSG00000187144|Q7Z572-2|SPATA21', 'ENSG00000187144|ENST00000335496|SPATA21'] 93029 12393 RPLKIVWGIFF True NCI_RA007_Epitope_Rep1 1374.81761291094 1374.81595490379 52.182 3 -1.6492626847081493 0.4322662590202999 1.0 ['nc|ENSG00000168216|Q9NUN5-3|LMBRD1', 'ENSG00000168216|ENST00000649934|LMBRD1', 'nc|ENSG00000168216|Q9NUN5-4|LMBRD1', 'nc|ENSG00000168216|Q9NUN5-2|LMBRD1'] 84564 4277 QAVLPGLY True NCI_RA007_Epitope_Rep5 859.4803539429099 859.47924993586 23.03 2 -1.6493519455531231 0.4322662590202999 1.0 ['ENST00000506422.1_1_4:159593571-159624608:+|nuORF'] 83345 7904 PTEPSTSSV True H1975_Epitope_Rep2 903.4185415319901 903.41744993586 35.35 2 -1.6493840704750398 0.4322662590202999 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 56246 26120 LCRHHPAD True H1975_Epitope_Rep3 947.4395688434299 947.4390249679301 108.83 1 -1.6493881420965715 0.4322662590202999 1.0 ['ENST00000207636.9_1_22:19950294-19951640:+|nuORF', 'ENST00000403710.5_1_22:19950294-19951749:+|nuORF'] 123072 5247 VGKGCGHF True PC9_epitope_Rep4 803.3748433285499 803.37374993586 26.882 2 -1.649423397249046 0.4322662590202999 1.0 ['ENST00000572919.1_3_17:3488830-3495572:-|nuORF'] 97086 4755 SDGQAELNIDI True NCI_RA007_Epitope_Rep5 1173.55134660669 1173.5502499358602 24.974 2 -1.649515212307276 0.4322662590202999 1.0 ['DNAI2|p.R23G|1|0.29|ENSG00000171595|chr17:74281884-74281884|C/G|missense_variant'] 43629 10149 IGWIVGCI True PC9_epitope_Rep5 859.4625957037899 859.46148993586 44.025 2 -1.6495518397418738 0.4322662590202999 1.0 ['ENSG00000240045|ENST00000489090|STRIT1'] 120407 15796 VEENLTARI True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 66.022 2 -1.649594226322782 0.43226778167430985 1.0 ['ENST00000531371.5_1_11:104776194-104789795:-|nuORF'] 119446 10149 VARCPPCL True PC9_epitope_Rep5 857.4251646492498 857.42406993586 44.025 2 -1.64961535718454 0.43226778167430985 1.0 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 110323 19658 TETIRMSYFGE True NCI_RA007_Epitope_Rep4 1332.6020022805599 1332.60034490379 84.954 3 -1.6498967994300862 0.43230940418788144 1.0 ['ENST00000601247.5_1_19:17858586-17877404:+|nuORF'] 134974 19550 WAYLVRFIQRN True NCI_RA007_Epitope_Rep3 1464.79900272468 1464.7973549037902 85.279 3 -1.6499807610911132 0.43230940418788144 1.0 ['ENST00000369721.8_1_1:111992139-111998768:+|nuORF'] 135344 24286 WGLSLERP True H1975_Epitope_Rep3 956.50796567308 956.50686993586 101.15 2 -1.6500854720728986 0.43230940418788144 1.0 ['nc|ENSG00000179115|Q9Y285-2|FARSA', 'ENSG00000179115|ENST00000314606|FARSA'] 138023 142 YFYFFGID True H1975_Epitope_Rep2 1070.4749342092998 1070.47382993586 0.76821 2 -1.6501255917648985 0.4323157847412669 1.0 ['ENST00000528485.1_1_11:59496051-59496324:+|nuORF'] 34072 14166 GLWGMGGK True NCI_RA007_Epitope_Rep1 804.3952444199598 804.39469496793 59.137 1 -1.6502040820639567 0.4323331085637222 1.0 ['ENST00000228515.5_1_12:51457285-51457513:-|nuORF'] 61958 12468 LLDLPTVVP True NCI_RA007_Epitope_Rep1 965.57973363101 965.57862993586 52.475 2 -1.650404884090801 0.4323331085637222 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 105244 20011 SRKIQIRNIP True NCI_RA007_Epitope_Rep2 1223.74623887583 1223.7451499358601 82.84 2 -1.6504691690191242 0.4323331085637222 1.0 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'IGF2BP2|p.A393Lfs*38|1|0.5|ENSG00000073792|chr3:185672565-185672565|G/-|frameshift_variant', 'ENST00000461957.5_1_3:185411014-185540996:-|nuORF', 'ENST00000466476.1_1_3:185414391-185542667:-|nuORF', 'ENST00000499130.6_1_17:47091311-47113981:+|nuORF', 'ENST00000515586.5_1_17:47075143-47113981:+|nuORF', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1', 'ENSG00000159217|ENST00000290341|IGF2BP1'] 128016 18674 VPISPVSVG True PC9_epitope_Rep1 853.49091862661 853.49037496793 76.619 1 -1.6505378289114458 0.4323331085637222 1.0 ['ENST00000584908.5_1_17:37856482-37868536:+|nuORF'] 141688 20335 YTTGEMLSL True PC9_epitope_Rep2 1013.4739482331299 1013.47284993586 83.642 2 -1.650570025106286 0.4323331085637222 1.0 ['ENSG00000118298|ENST00000369111|CA14'] 62825 25506 LLLYFQLREKA True NCI_RA007_Epitope_Rep5 1392.8129214533199 1392.81182993586 105.65 2 -1.650583435815182 0.4323331085637222 1.0 ['ENST00000561073.1_1_15:101116892-101121059:-|nuORF'] 62582 18450 LLKRRNVP True PC9_epitope_Rep2 994.6399829021399 994.63888993586 76.299 2 -1.6506845561911538 0.4323331085637222 1.0 ['ENSG00000186432|ENST00000334256|KPNA4'] 33323 23179 GKPRNRRAAR True PC9_epitope_Rep2 1180.7013543720798 1180.69969490379 94.643 3 -1.6507685884852368 0.4323331085637222 1.0 ['ENST00000604760.1_1_15:67834762-67834924:-|nuORF'] 103338 18924 SPMTAAAC True NCI_RA007_Epitope_Rep3 750.30404645706 750.3029499358599 82.723 2 -1.6510019521750767 0.43237958238744917 1.0 ['ENSG00000185262|ENST00000327490|UBALD2'] 13215 13665 DLSKEERLWEV True H1975_Epitope_Rep3 1402.7092442304202 1402.70814993586 57.853 2 -1.6510072596666492 0.43237958238744917 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 62727 15878 LLLPFHKYF True NCI_RA007_Epitope_Rep3 1176.66955169492 1176.66844993586 70.112 2 -1.651040278341395 0.43239234019599027 1.0 ['ENST00000367688.3_1_1:174933997-174934066:+|nuORF'] 56463 9555 LDELSLFGP True NCI_RA007_Epitope_Rep2 989.5069626135698 989.50586993586 41.781 2 -1.651151587958809 0.43239234019599027 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 69850 15986 LVHHLTFQAR True PC9_epitope_Rep1 1220.67782496284 1220.67672993586 66.299 2 -1.6514010624749649 0.43240661662246593 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 61083 25910 LIHGTADD True PC9_epitope_Rep5 840.39774651776 840.39664993586 105.14 2 -1.651444467409401 0.43240661662246593 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 86657 19680 QLHFNQCL True PC9_epitope_Rep2 1001.4752856458099 1001.47418993586 81.086 2 -1.6515021552013338 0.43240661662246593 1.0 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8'] 71597 17626 MDHVFLLL True NCI_RA007_Epitope_Rep1 986.52592423634 986.52482993586 72.697 2 -1.6515037655983151 0.43240661662246593 1.0 ['TGM4|p.A454V|1|0.24|ENSG00000163810|chr3:44910123-44910123|C/T|missense_variant'] 4573 21323 AKPGGFGMG True PC9_epitope_Rep6 820.3901590395199 820.38906993586 94.879 2 -1.6515338528967807 0.4324081357455894 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 37169 6551 GVQPPNVP True NCI_RA007_Epitope_Rep2 806.4286527232199 806.42754993586 30.094 2 -1.6516553354413686 0.4324081357455894 1.0 ['SCAF8|p.R1177Sfs*21|1|0.25|ENSG00000213079|chr6:154833106-154833107|-/T|frameshift_variant', 'ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 133148 25117 VVQVIKLA True NCI_RA007_Epitope_Rep2 868.5745886809199 868.57404496793 105.76 1 -1.6517458166505357 0.4324096548004315 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 59024 20768 LEVPEPYP True PC9_epitope_Rep1 942.46984882886 942.46930496793 84.712 1 -1.6517569336121474 0.4324096548004315 1.0 ['ENSG00000135451|ENST00000257909|TROAP'] 10701 23267 CRKLLSLFLA True PC9_epitope_Rep2 1162.6896355165 1162.68799490379 94.981 3 -1.6517792530541149 0.4324160327216747 1.0 ['CFAP54|p.S1893C|1|0.15|ENSG00000188596|chr12:96679713-96679713|A/T|missense_variant'] 31075 10822 GATSLYRW True PC9_epitope_Rep5 952.4766655448 952.47556993586 46.616 2 -1.6518664464213466 0.43242241049958424 1.0 ['ENST00000520124.5_1_8:22005675-22011752:-|nuORF', 'nc|ENSG00000168481|Q8N145-2|LGI3', 'ENSG00000168481|ENST00000306317|LGI3'] 129404 10673 VRERFEMFREL True H1975_Epitope_Rep1 1510.7714676475 1510.7703699358601 46.012 2 -1.6520604548243387 0.43243182507668626 1.0 ['TP53|p.G334V|2|0.43|ENSG00000141510|chr17:7670708-7670708|C/A|missense_variant'] 20809 20854 EQIHDYRTKRT True NCI_RA007_Epitope_Rep2 1445.7375246669299 1445.73642993586 86.249 2 -1.6521038060986604 0.43243182507668626 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 133147 25788 VVQVIKLA True NCI_RA007_Epitope_Rep1 868.5745886809199 868.57404496793 106.73 1 -1.6521118694137276 0.43243182507668626 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 30906 9489 GAQGSGASK True H1975_Epitope_Rep3 761.36678074265 761.36623496793 41.504 1 -1.6522179408788715 0.43243182507668626 1.0 ['ENST00000604104.1_1_9:98268979-98269411:+|nuORF'] 80704 23721 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 98.585 2 -1.6522523118513104 0.43243182507668626 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 15566 8882 EAQERSFQEYM True H1975_Epitope_Rep1 1416.5979795292797 1416.5968899358602 39.076 2 -1.6524493428290539 0.4324494382022472 1.0 ['ENSG00000162654|ENST00000355754|GBP4'] 94206 24663 RRPPPVNPGSV True PC9_epitope_Rep3 1174.65708951826 1174.6559899358601 100.23 2 -1.6526312000606387 0.432467050932012 1.0 ['ENSG00000163659|ENST00000295924|TIPARP'] 99829 8350 SILDRGVP True PC9_epitope_Rep1 855.4814165720699 855.48030993586 36.952 2 -1.65276670253607 0.43247980405154884 1.0 ['ENST00000565348.5_1_16:30484158-30495228:+|nuORF'] 133223 21294 VVSPHGGL True PC9_epitope_Rep6 764.41808803952 764.41698993586 94.76 2 -1.6528549013546605 0.43247980405154884 1.0 ['ENSG00000130150|ENST00000380492|MOSPD2', 'nc|ENSG00000130150|Q8NHP6-2|MOSPD2'] 64115 7797 LPEAVVLWLC True H1975_Epitope_Rep1 1141.62055289717 1141.61944993586 34.947 2 -1.6528893285966004 0.4324861803963867 1.0 ['ENST00000462848.5_1_2:219894910-219906234:-|nuORF'] 139858 14702 YPPGAILV True NCI_RA007_Epitope_Rep3 828.47454028648 828.47344993586 65.227 2 -1.6529309594535115 0.4324955903335618 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 113004 6374 TLMAPRVAA True PC9_epitope_Rep2 928.5164221817998 928.51532993586 29.921 2 -1.6529924505459803 0.4324955903335618 1.0 ['ENST00000531934.5_1_2:71297680-71299860:+|nuORF', 'ENST00000428360.2_1_2:71297680-71299860:+|nuORF'] 103233 1991 SPLFLLVKIFR True NCI_RA007_Epitope_Rep1 1331.8329286219098 1331.83129490379 10.486 3 -1.6530105722634434 0.4324955903335618 1.0 ['ENST00000568903.5_1_16:24803023-24807335:+|nuORF'] 127387 8386 VNEEQPEAK True NCI_RA007_Epitope_Rep2 1042.4931034545798 1042.4925749679298 37.26 1 -1.6530273915356741 0.4324955903335618 1.0 ['ENSG00000165164|ENST00000378653|CFAP47'] 63717 14288 LNCDDKVYDLM True H1975_Epitope_Rep1 1327.57882430783 1327.5777299358601 60.145 2 -1.6530379204731889 0.4324955903335618 1.0 ['TEK|p.E1066K|1|0.12|ENSG00000120156|chr9:27220141-27220141|G/A|missense_variant'] 64246 9530 LPHFESLGKQ True PC9_epitope_Rep4 1154.6084079903399 1154.60730993586 44.27 2 -1.6533062412738024 0.43253081079866534 1.0 ['nc|ENSG00000077254|Q8TEY7|USP33', 'ENST00000528150.1_1_1:78206598-78225465:-|nuORF', 'nc|ENSG00000077254|Q8TEY7-3|USP33'] 114847 8762 TQNEGHPKW True H1975_Epitope_Rep2 1095.50975657823 1095.5086499358601 38.666 2 -1.6533864279801331 0.43253081079866534 1.0 ['nc|ENSG00000079150|Q9Y680-1|FKBP7', 'ENST00000464248.1_1_2:179330632-179343265:-|nuORF', 'nc|ENSG00000079150|Q9Y680-3|FKBP7', 'ENSG00000079150|ENST00000424785|FKBP7'] 132633 24697 VVFLKQLA True NCI_RA007_Epitope_Rep5 916.5745886809199 916.57348993586 102.48 2 -1.6534645375429116 0.4325484204376938 1.0 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF', 'ENST00000414898.1_1_1:241995599-241995785:+|nuORF'] 89860 7843 RASWGVRGAQ True PC9_epitope_Rep5 1086.5682745138597 1086.5671699358602 35.111 2 -1.6535665998066673 0.43255599739390266 1.0 ['nc|ENSG00000114626|Q969K4-4|ABTB1'] 87667 5320 QQSLYLHRYYF True PC9_epitope_Rep5 1516.7462984454799 1516.7446649037902 25.476 3 -1.65359848119822 0.43255599739390266 1.0 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 56501 15053 LDFGEKRGYL True PC9_epitope_Rep3 1196.6189726740397 1196.6178699358602 63.031 2 -1.6537082513616004 0.43255599739390266 1.0 ['ENSG00000144395|ENST00000389175|CCDC150', 'CCDC150|p.N680Tfs*24|1|0.23|ENSG00000144395|chr2:196719540-196719549|ACTGCAAAGT/-|frameshift_variant', 'ENST00000471546.5_1_2:197504460-197531652:+|nuORF'] 69854 5733 LVHKLIFQYVE True H1975_Epitope_Rep1 1387.7863723523099 1387.78471490379 27.12 3 -1.6537226165700576 0.43255599739390266 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 125483 17483 VIYAFNAYF True PC9_epitope_Rep5 1106.54368247546 1106.5425899358602 72.25 2 -1.6538183593191327 0.43255599739390266 1.0 ['DRD5|p.D364Y|1|0.26|ENSG00000169676|chr4:9783119-9783119|G/T|missense_variant'] 128511 6605 VPSRAPSPAP True PC9_epitope_Rep4 977.5294293936499 977.52832993586 32.565 2 -1.653890304308351 0.43255599739390266 1.0 ['ENSG00000128298|ENST00000381669|BAIAP2L2', 'nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2'] 92757 20811 RPAAHQAQA True NCI_RA007_Epitope_Rep5 948.4889615639999 948.48786993586 87.033 2 -1.6538933832695073 0.43255599739390266 1.0 ['nc|ENSG00000186074|Q8TDQ1-5|CD300LF'] 20103 11837 EMLSLEGAMDS True PC9_epitope_Rep3 1181.49442597753 1181.4933299358602 50.551 2 -1.6540164587036428 0.43255599739390266 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant'] 90761 11929 RERRLENTMKD True NCI_RA007_Epitope_Rep1 1446.7361447679398 1446.73450490379 50.386 3 -1.6540492419495645 0.43255599739390266 1.0 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'ERCC6L2|p.L402Afs*12|1|0.74|ENSG00000182150|chr9:96012835-96012836|-/T|frameshift_variant'] 63000 20568 LLPPRLLGL True PC9_epitope_Rep1 990.6589870112199 990.65788993586 83.928 2 -1.6541817416735867 0.43255599739390266 1.0 ['ENST00000570507.5_1_17:79780712-79780796:-|nuORF', 'ENST00000576730.5_2_17:79780712-79781139:-|nuORF'] 76213 21569 NNRLELLPI True H1975_Epitope_Rep2 1080.6291434349198 1080.6280499358602 89.238 2 -1.654307191568504 0.43259121135873474 1.0 ['ENST00000492787.6_1_6:139234041-139235943:-|nuORF'] 89014 19863 QVKGAIGSRLV True PC9_epitope_Rep3 1126.6822416369398 1126.68114993586 81.64 2 -1.6543296552853284 0.43259121135873474 1.0 ['ABCB1|p.A834V|1|0.33|ENSG00000085563|chr7:87531478-87531478|G/A|missense_variant'] 125137 25450 VIGIHIGV True PC9_epitope_Rep2 806.50142374066 806.50087496793 103.57 1 -1.6544016254774507 0.43260881774782367 1.0 ['ENSG00000174498|ENST00000327987|IGDCC3'] 5356 7616 ALRSVSDP True PC9_epitope_Rep1 843.4450310633499 843.44392993586 34.115 2 -1.6544692694296448 0.43262642374137894 1.0 ['ENST00000602321.5_1_16:67682040-67682571:+|nuORF'] 122713 12949 VGGGSIRN True NCI_RA007_Epitope_Rep3 758.40350060454 758.4029549679301 58.209 1 -1.6545860350767347 0.43263279679198446 1.0 ['MAMDC2|p.L627Efs*3|1|0.07|ENSG00000165072|chr9:70218563-70218564|-/GAGGC|frameshift_variant', 'ENSG00000165072|ENST00000377182|MAMDC2'] 125139 23705 VIGIHIGV True PC9_epitope_Rep6 806.50142374066 806.50087496793 104.36 1 -1.6547572619462705 0.4326391696994204 1.0 ['ENSG00000174498|ENST00000327987|IGDCC3'] 122966 25225 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 102.18 2 -1.6547910034282016 0.4326534279809507 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 127567 5112 VNSQPVSIAEN True NCI_RA007_Epitope_Rep1 1156.5724164044398 1156.5713099358602 23.969 2 -1.6548196165623683 0.4326534279809507 1.0 ['WDR72|p.M1016I|1|0.06|ENSG00000166415|chr15:53597179-53597179|C/A|missense_variant'] 23532 13269 EVVRYEEEPGL True NCI_RA007_Epitope_Rep1 1318.6404959642596 1318.6393899358602 55.614 2 -1.6548284814689376 0.4326534279809507 1.0 ['ENSG00000118898|ENST00000345988|PPL'] 130673 20308 VSTLGLYME True H1975_Epitope_Rep2 1011.49468367771 1011.49358993586 84.157 2 -1.654881131218386 0.4326534279809507 1.0 ['ENSG00000070785|ENST00000360403|EIF2B3', 'nc|ENSG00000070785|Q9NR50-3|EIF2B3', 'nc|ENSG00000070785|Q9NR50-2|EIF2B3'] 72370 25399 MKAKKIMK True PC9_epitope_Rep2 976.5925643275199 976.59201496793 103.38 1 -1.6549393712683564 0.43267405685276905 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 126560 26553 VLLQAFDIM True H1975_Epitope_Rep3 1048.56270366788 1048.5616099358601 110.86 2 -1.6551704086663677 0.43267405685276905 1.0 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF'] 105789 3939 SSHTPIQFGR True NCI_RA007_Epitope_Rep2 1128.5676058075198 1128.56650993586 19.958 2 -1.6551873777321535 0.43267405685276905 1.0 ['ENST00000375587.7_2_9:95088363-95094616:+|nuORF'] 60567 3879 LHFYFLMQR True H1975_Epitope_Rep2 1253.6379342968098 1253.63629490379 19.961 3 -1.65526851422015 0.43267405685276905 1.0 ['ENST00000377126.3_1_9:73001619-73001904:-|nuORF'] 119435 13498 VAQQRYWEWTP True PC9_epitope_Rep3 1462.6993482530597 1462.69824993586 56.972 2 -1.655304375269079 0.43267405685276905 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 61070 5864 LIGQVTARDP True H1975_Epitope_Rep2 1068.5927579262 1068.5916699358602 27.541 2 -1.655367851240231 0.43268042858105527 1.0 ['CDH8|p.V409L|1|0.17|ENSG00000150394|chr16:61817531-61817531|C/A|missense_variant'] 130277 9408 VSGPPDLRT True PC9_epitope_Rep4 940.4977949122 940.49668993586 43.796 2 -1.6554937281720408 0.4326868001662193 1.0 ['ENST00000373204.5_1_1:36348973-36354130:+|nuORF'] 131430 20874 VTIHQEPFV True PC9_epitope_Rep6 1068.56039516876 1068.55928993586 93.065 2 -1.6555584995145751 0.4326931716082659 1.0 ['nc|ENSG00000176884|Q05586-2|GRIN1', 'nc|ENSG00000176884|Q05586-3|GRIN1', 'nc|ENSG00000176884|Q05586-7|GRIN1', 'nc|ENSG00000176884|Q05586-4|GRIN1', 'ENSG00000176884|ENST00000371561|GRIN1', 'nc|ENSG00000176884|Q05586-6|GRIN1', 'nc|ENSG00000176884|Q05586-5|GRIN1'] 62704 18580 LLLLWGSC True PC9_epitope_Rep4 903.48881045163 903.48770993586 79.544 2 -1.6556485005846464 0.43270591406302644 1.0 ['nc|ENSG00000143839|P00797-2|REN', 'ENSG00000143839|ENST00000272190|REN'] 58285 11811 LELTAC[Carbamidomethyl]EPL True PC9_epitope_Rep5 1044.51614767771 1044.5150499358601 50.427 2 -1.6556597791307126 0.43270591406302644 1.0 ['ENST00000343534.9_1_1:112020844-112021090:+|nuORF'] 125543 6665 VKIKLHKII True PC9_epitope_Rep2 1090.75903540566 1090.7579299358601 31.042 2 -1.6557113062158861 0.43271012295772276 1.0 ['MTIF2|p.F659Ifs*2|1|0.28|ENSG00000085760|chr2:55237324-55237325|-/T|frameshift_variant', 'ENSG00000085760|ENST00000263629|MTIF2'] 80701 19099 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 80.334 2 -1.6557118663438413 0.43271012295772276 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 121479 24554 VEYGKKKRRYL True NCI_RA007_Epitope_Rep5 1438.8408675366597 1438.8397699358602 101.92 2 -1.6557910221018224 0.43271012295772276 1.0 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000414624.6_1_11:61645294-61658904:-|nuORF'] 92015 18925 RKRQRRHG True NCI_RA007_Epitope_Rep3 1092.6489248763999 1092.64782993586 82.727 2 -1.6558212407774506 0.43271012295772276 1.0 ['ENST00000425046.1_1_3:4345037-4358927:+|nuORF'] 124074 6840 VGSLLPPV True NCI_RA007_Epitope_Rep3 780.47454028648 780.47344993586 34.018 2 -1.6558967839380194 0.43271012295772276 1.0 ['ENSG00000161021|ENST00000292599|MAML1'] 47037 9322 ITRRDTFNH True H1975_Epitope_Rep2 1158.5894038812598 1158.58830993586 40.817 2 -1.6559166477448586 0.43271012295772276 1.0 ['RAB2A|p.D87Y|1|0.39|ENSG00000104388|chr8:60584280-60584280|G/T|missense_variant', 'ENST00000530071.5_1_8:61496609-61533325:+|nuORF', 'ENST00000466595.5_1_8:61488829-61533325:+|nuORF', 'ENST00000429861.5_1_8:61471430-61504606:+|nuORF', 'nc|ENSG00000104388|P61019-2|RAB2A', 'ENSG00000104388|ENST00000262646|RAB2A'] 102089 23522 SLRGRGLA True PC9_epitope_Rep2 828.4929843152798 828.49188993586 95.95 2 -1.6559325056858503 0.43271012295772276 1.0 ['ENST00000433465.1_1_21:46713271-46716280:+|nuORF'] 109422 16322 TDFCMSKWEE True NCI_RA007_Epitope_Rep5 1274.4947603306998 1274.49310490379 69.537 3 -1.6559398068296989 0.43271012295772276 1.0 ['nc|ENSG00000171044|Q5GH73-2|XKR6', 'XKR6|p.L584Sfs*19|1|0.21|ENSG00000171044|chr8:10898132-10898132|C/-|frameshift_variant', 'ENSG00000171044|ENST00000416569|XKR6', 'ENSG00000260903|ENST00000562532|XKR7'] 99270 19726 SHQLHTPMYF True PC9_epitope_Rep5 1259.57572796307 1259.57462993586 80.922 2 -1.6559653694986998 0.43271012295772276 1.0 ['OR6F1|p.A273Lfs*5|1|0.23|ENSG00000169214|chr1:247711943-247711943|G/-|frameshift_variant', 'ENSG00000169214|ENST00000641470|OR6F1'] 34403 11773 GPGWGGAH True PC9_epitope_Rep2 737.32452200785 737.3239749679301 50.616 1 -1.6559733513934347 0.43271012295772276 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 19938 17848 ELVIWCISL True NCI_RA007_Epitope_Rep4 1074.5783537320199 1074.5772499358602 77.278 2 -1.6559863228175211 0.43271012295772276 1.0 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2'] 71375 14579 LYRNPKEWTKK True H1975_Epitope_Rep1 1461.8092330552097 1461.80812993586 61.284 2 -1.656010261759056 0.43271012295772276 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 132553 7742 VVEAFGGL True NCI_RA007_Epitope_Rep5 790.4225047136199 790.42140993586 36.477 2 -1.656070770981539 0.43271012295772276 1.0 ['ENST00000503718.2_1_8:104133327-104144958:+|nuORF'] 82407 22412 PPLVVSST True NCI_RA007_Epitope_Rep5 798.4487194614601 798.44762993586 93.375 2 -1.6560950491893953 0.43271649299317283 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 21045 7714 EQTLDRFLVE True H1975_Epitope_Rep1 1248.6350166609998 1248.6339099358602 34.634 2 -1.6561281074753027 0.43271800399739496 1.0 ['ENST00000578237.5_1_17:15586405-15587608:-|nuORF'] 70731 19961 LWRRRGALRFR True PC9_epitope_Rep6 1485.8905521240897 1485.88944993586 89.443 2 -1.6561353427964318 0.43271800399739496 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|347|3|anti-sense'] 10383 22389 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 97.138 2 -1.6562069896119556 0.4327307433191107 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 46245 10233 ISNQECNIK True PC9_epitope_Rep2 1047.5018943164698 1047.5007899358602 44.697 2 -1.6562092050568478 0.4327307433191107 1.0 ['ENST00000492329.5_1_3:49721463-49723185:-|nuORF', 'nc|ENSG00000173531|P26927|MST1', 'ENSG00000173531|ENST00000449682|MST1', 'nc|ENSG00000186715|Q2TV78-2|MST1L', 'nc|ENSG00000186715|Q2TV78|MST1L'] 30496 16501 GAGDSLLQ True NCI_RA007_Epitope_Rep1 759.37628279719 759.37573496793 68.3 1 -1.6562308705624236 0.432737112765408 1.0 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF'] 24908 20396 FAYLFVNI True H1975_Epitope_Rep3 985.5273041353299 985.52620993586 85.279 2 -1.6564351710326193 0.4327659383350924 1.0 ['ENSG00000189221|ENST00000338702|MAOA', 'nc|ENSG00000189221|P21397-2|MAOA'] 123790 11262 VGRKTALH True NCI_RA007_Epitope_Rep1 880.52428444356 880.52318993586 47.792 2 -1.6565155560809548 0.4327723072431874 1.0 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF'] 73726 10529 NAAGFNVEK True H1975_Epitope_Rep3 948.4664947839199 948.46594496793 45.565 1 -1.6565957281641062 0.43278018548043024 1.0 ['ENSG00000179630|ENST00000325686|LACC1'] 63754 18867 LNEIKDSV True PC9_epitope_Rep4 916.4865615221601 916.48546993586 80.658 2 -1.6565972486963083 0.43278018548043024 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 65463 23693 LRKILLRKFCQ True PC9_epitope_Rep2 1416.8751448704 1416.87404993586 96.608 2 -1.656606197505923 0.43278018548043024 1.0 ['nc|ENSG00000050628|P43115-7|PTGER3', 'nc|ENSG00000050628|P43115-10|PTGER3', 'nc|ENSG00000050628|P43115-3|PTGER3', 'nc|ENSG00000050628|P43115-2|PTGER3', 'ENSG00000050628|ENST00000306666|PTGER3', 'nc|ENSG00000050628|P43115-8|PTGER3', 'nc|ENSG00000050628|P43115-9|PTGER3', 'nc|ENSG00000050628|P43115-11|PTGER3', 'nc|ENSG00000050628|P43115-4|PTGER3', 'nc|ENSG00000050628|P43115-5|PTGER3', 'nc|ENSG00000050628|P43115-6|PTGER3', 'nc|ENSG00000050628|P43115-12|PTGER3'] 72280 20004 MIALLLWRPRA True NCI_RA007_Epitope_Rep5 1338.79583192054 1338.79417490379 83.863 3 -1.6567022298336134 0.43278957236362003 1.0 ['nc|ENSG00000112494|Q86WB7-2|UNC93A', 'ENSG00000112494|ENST00000230256|UNC93A'] 13245 15288 DLSSPGMT True H1975_Epitope_Rep3 806.3480194440201 806.3474749679301 64.213 1 -1.6567093386435203 0.43278957236362003 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 80705 23870 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 99.185 2 -1.6567954240436218 0.43278957236362003 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2', 'PRUNE2|p.E1305Q|1|0.19|ENSG00000106772|chr9:76708361-76708361|C/G|missense_variant'] 12266 16705 DIKSEEPL True PC9_epitope_Rep1 929.4705771048499 929.46948993586 69.084 2 -1.656817018293504 0.43278957236362003 1.0 ['KDM3B|p.R1187K|1|0.12|ENSG00000120733|chr5:138419077-138419077|G/A|missense_variant'] 24723 4802 FANSSYLA True NCI_RA007_Epitope_Rep1 871.4075829254699 871.40648993586 22.759 2 -1.6569417019141544 0.43278957236362003 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENST00000542519.1_1_12:6782380-6787618:-|nuORF'] 27630 6369 FPCFPLHLAE True NCI_RA007_Epitope_Rep2 1172.56885167748 1172.56774993586 29.381 2 -1.6569920955861892 0.4328071672354949 1.0 ['ENST00000485835.1_1_17:38151035-38151804:+|nuORF'] 29105 5412 FTKTSQKFGQW True H1975_Epitope_Rep1 1356.6826355597598 1356.68152993586 25.874 2 -1.6571526750303789 0.4328135349657023 1.0 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3', 'nc|ENSG00000152413|Q86YM7-3|HOMER1', 'nc|ENSG00000051128|Q9NSC5-5|HOMER3', 'ENSG00000103942|ENST00000450735|HOMER2', 'nc|ENSG00000103942|Q9NSB8|HOMER2', 'ENSG00000152413|ENST00000334082|HOMER1', 'nc|ENSG00000152413|Q86YM7-2|HOMER1'] 127404 20338 VNEPQKNR True PC9_epitope_Rep4 983.5148419586699 983.51429496793 86.374 1 -1.6571734171766046 0.4328199025529335 1.0 ['ENST00000595692.1_1_19:7679981-7682940:+|nuORF', 'ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 120126 17187 VEAEEPPQE True NCI_RA007_Epitope_Rep1 1026.4505699362596 1026.4499749679298 70.987 1 -1.657455492345227 0.43282777821435386 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P1059Rfs*35|1|0.35|ENSG00000080603|chr16:30720897-30720897|C/-|frameshift_variant', 'SRCAP|p.Q1189Sfs*2|1|0.18|ENSG00000080603|chr16:30722142-30722142|G/-|frameshift_variant', 'SRCAP|p.A1596Sfs*250|1|0.25|ENSG00000080603|chr16:30724210-30724214|GCAAT/-|frameshift_variant'] 18661 9332 ELAASQRAV True PC9_epitope_Rep1 943.50869394907 943.50758993586 40.752 2 -1.6575059975087385 0.43282777821435386 1.0 ['nc|ENSG00000164591|Q8TDC0-3|MYOZ3'] 92196 4674 RLHHEEDGHV True PC9_epitope_Rep4 1227.57448209311 1227.5728349037902 24.508 3 -1.6575511970450596 0.43282777821435386 1.0 ['ENST00000298573.8_1_12:12633165-12633258:-|nuORF'] 68294 5466 LTEHLDRVML True NCI_RA007_Epitope_Rep2 1225.6488929033299 1225.64725490379 25.879 3 -1.6576229281764983 0.4328356533453076 1.0 ['ENSG00000124140|ENST00000243964|SLC12A5', 'nc|ENSG00000124140|Q9H2X9|SLC12A5'] 57052 11302 LDSCHLDLGPE True H1975_Epitope_Rep1 1197.53358836757 1197.5324899358602 48.45 2 -1.6576626415042672 0.4328356533453076 1.0 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 42186 7292 IDRAAGGK True NCI_RA007_Epitope_Rep1 786.4348007328199 786.43370993586 32.354 2 -1.6577083259510692 0.4328356533453076 1.0 ['ENST00000424768.1_1_7:105926115-105926304:-|nuORF'] 133817 23388 VYFVVFPF True NCI_RA007_Epitope_Rep5 1016.5371405430398 1016.53604993586 97.257 2 -1.657799980050326 0.4328420201838776 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 44806 9955 IMTVRKAL True NCI_RA007_Epitope_Rep1 930.5684577546599 930.56736993586 42.727 2 -1.6579024398775144 0.43285961249186145 1.0 ['ENSG00000124089|ENST00000243911|MC3R'] 95742 24349 RYGSPGVLPLA True H1975_Epitope_Rep2 1128.62914343492 1128.6274949037902 100.19 3 -1.658028616943726 0.4328611198419469 1.0 ['ENST00000377191.4_1_20:21283966-21306951:+|nuORF'] 69888 13310 LVIHRKGHR True PC9_epitope_Rep4 1114.68357904962 1114.68248993586 59.092 2 -1.6581136423907636 0.4328611198419469 1.0 ['ENSG00000083838|ENST00000594369|ZNF446', 'ENST00000391694.4_1_19:58989172-58992090:+|nuORF'] 93878 25235 RRERRYILPD True PC9_epitope_Rep2 1372.7687652255597 1372.76710490379 102.73 3 -1.6583110774084555 0.4328787113430993 1.0 ['ENSG00000060339|ENST00000265872|CCAR1', 'nc|ENSG00000060339|Q8IX12-2|CCAR1', 'CCAR1|p.T1062Ifs*11|1|0.15|ENSG00000060339|chr10:68788325-68788326|-/TATAC|frameshift_variant'] 72157 7228 MFWAMYYLLRY True PC9_epitope_Rep3 1555.73559973275 1555.7339549037902 32.814 3 -1.65840797627983 0.43288507734099635 1.0 ['CYP7B1|p.H311Y|1|0.35|ENSG00000172817|chr8:64615152-64615152|G/A|missense_variant'] 114299 8892 TPQDTLSVP True NCI_RA007_Epitope_Rep4 956.4814761417199 956.48036993586 41.028 2 -1.6585143899072674 0.43288658405172414 1.0 ['ENST00000568229.5_1_15:74212299-74212341:-|nuORF'] 97100 8370 SDHFHSEETEE True H1975_Epitope_Rep1 1345.50585296625 1345.5047499358602 37.123 2 -1.658521549957443 0.43288658405172414 1.0 ['nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENSG00000115183|ENST00000263635|TANC1', 'ENST00000470074.1_1_2:160076105-160087520:+|nuORF'] 73973 3668 NCSLPLVL True PC9_epitope_Rep5 857.46807500705 857.46696993586 19.197 2 -1.6586808542464118 0.43291204597494726 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 119996 3315 VDQLWKLMNSG True PC9_epitope_Rep5 1289.6438075228898 1289.64217490379 17.806 3 -1.6587109863712388 0.43291204597494726 1.0 ['ENSG00000064313|ENST00000378164|TAF2'] 107394 5404 SVLLVLLLVI True PC9_epitope_Rep3 1080.75221868972 1080.75112993586 25.86 2 -1.6587334076038618 0.43291204597494726 1.0 ['ENSG00000143502|ENST00000366878|SUSD4', 'nc|ENSG00000143502|Q5VX71-2|SUSD4'] 43135 14542 IFCMPTTLV True NCI_RA007_Epitope_Rep4 1023.51331094731 1023.5127749679301 63.308 1 -1.6587807367164737 0.43291204597494726 1.0 ['ENSG00000148734|ENST00000277942|NPFFR1'] 130567 16743 VSRQWLPI True PC9_epitope_Rep2 997.5709002828098 997.56980993586 69.648 2 -1.658815819182477 0.43291841109851503 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|439|3|anti-sense'] 16790 6494 EEVFSKYLNFV True NCI_RA007_Epitope_Rep1 1373.6867178806897 1373.68507490379 29.28 3 -1.6589078529226102 0.43292628176349107 1.0 ['ENSG00000095464|ENST00000371447|PDE6C'] 89466 5236 QYFGLKAEAAP True H1975_Epitope_Rep3 1193.6080736371698 1193.60641490379 25.225 3 -1.6589617449019518 0.43292628176349107 1.0 ['nc|ENSG00000185615|Q13087-2|PDIA2', 'ENSG00000185615|ENST00000219406|PDIA2'] 36998 14297 GVNPDGSP True NCI_RA007_Epitope_Rep3 741.32933260477 741.32878496793 63.558 1 -1.658970211275621 0.43292628176349107 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 10312 20336 CDPYLLPH True NCI_RA007_Epitope_Rep5 956.4425885352 956.44148993586 85.16 2 -1.6590313117828663 0.4329550938864384 1.0 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2', 'ENST00000530992.1_1_17:32364642-32365872:-|nuORF', 'ENST00000580203.1_1_17:60689719-60689923:+|nuORF'] 124002 6976 VGSEPETA True NCI_RA007_Epitope_Rep5 788.35521299944 788.35466496793 33.516 1 -1.6592262682329402 0.4329678223100147 1.0 ['ENST00000571253.1_1_17:7145340-7145505:-|nuORF'] 65757 11001 LSDDIPFRVNW True NCI_RA007_Epitope_Rep3 1360.67755017932 1360.67644993586 50.362 2 -1.659270483431968 0.4329678223100147 1.0 ['nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1', 'ENST00000494373.1_1_2:54014347-54015815:+|nuORF'] 73265 7146 MSGGGTHR True NCI_RA007_Epitope_Rep1 801.3551705131301 801.35406993586 31.786 2 -1.6593774120422777 0.4329854096520763 1.0 ['ENSG00000142347|ENST00000644032|MYO1F'] 124571 23133 VGVRRVPPTR True PC9_epitope_Rep5 1135.6938093801498 1135.6927099358602 93.97 2 -1.6595602256652564 0.4330011447040603 1.0 ['ENST00000368039.2_1_1:160771789-160771924:+|nuORF'] 136105 8325 WRLRHFVSWLW True H1975_Epitope_Rep1 1584.84662162344 1584.8455299358602 36.954 2 -1.659697631308646 0.4330011447040603 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 33909 14867 GLQMASRYTV True PC9_epitope_Rep4 1124.5648289261999 1124.56372993586 65.124 2 -1.6597067822168987 0.4330011447040603 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 27411 5893 FLWLSFALH True PC9_epitope_Rep4 1132.6069514383598 1132.60531490379 29.566 3 -1.659727464837923 0.4330011447040603 1.0 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF', 'ENST00000484411.1_1_10:77163655-77167299:+|nuORF', 'ENST00000425916.4_1_10:77163018-77167299:+|nuORF'] 121592 18193 VFFFKVPKLG True NCI_RA007_Epitope_Rep3 1180.7008518231999 1180.69921490379 79.68 3 -1.6597944830234421 0.4330011447040603 1.0 ['nc|ENSG00000133059|Q6XUX3-3|DSTYK', 'nc|ENSG00000133059|Q6XUX3-2|DSTYK', 'ENSG00000133059|ENST00000367162|DSTYK'] 131377 6732 VTGYRDPYTEQ True H1975_Epitope_Rep1 1327.6044448087098 1327.60334993586 30.937 2 -1.6598069351381664 0.4330011447040603 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 27676 22051 FPGYPIHV True NCI_RA007_Epitope_Rep5 928.4806882960798 928.47958993586 91.948 2 -1.6599155519473503 0.43301873029054955 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L'] 14780 9334 DVNVYLGLTS True NCI_RA007_Epitope_Rep2 1079.5498900547097 1079.5487899358602 40.915 2 -1.6599385161705686 0.4330329588939637 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'TEX14|p.D842Gfs*23|1|0.06|ENSG00000121101|chr17:58593623-58593624|AT/-|frameshift_variant', 'ENSG00000121101|ENST00000349033|TEX14'] 87182 11694 QPHIWDFLL True NCI_RA007_Epitope_Rep4 1167.60767971435 1167.60604490379 51.942 3 -1.66000208472574 0.4330329588939637 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant', 'ABCA13|p.V1886Wfs*4|1|0.45|ENSG00000179869|chr7:48275317-48275317|G/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-2|ABCA13', 'ABCA13|p.D197Mfs*7|1|0.25|ENSG00000179869|chr7:48227382-48227382|G/-|frameshift_variant'] 130610 10300 VSSLNEVKI True PC9_epitope_Rep4 987.56006081559 987.55896993586 47.306 2 -1.6600072497112015 0.4330329588939637 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10', 'ENST00000473087.1_1_2:10822102-10830002:-|nuORF'] 40806 22392 HSAAAAAA True PC9_epitope_Rep4 668.32418765468 668.32363496793 94.364 1 -1.6600280059861359 0.4330329588939637 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'EMX2|p.H92Lfs*49|1|0.31|ENSG00000170370|chr10:117543541-117543542|-/T|frameshift_variant', 'nc|ENSG00000170370|Q04743-2|EMX2', 'nc|ENSG00000006377|P56179-2|DLX6', 'ENSG00000006377|ENST00000518156|DLX6', 'ENSG00000166188|ENST00000299237|ZNF319', 'ENSG00000043355|ENST00000376335|ZIC2'] 100341 15323 SKNDISKV True NCI_RA007_Epitope_Rep3 889.48689587533 889.48578993586 67.83 2 -1.6600746835315456 0.4330393213035281 1.0 ['ENST00000475774.5_1_9:36036951-36066822:+|nuORF', 'ENST00000479053.1_1_9:36036974-36085209:+|nuORF', 'RECK|p.W261Afs*5|1|0.29|ENSG00000122707|chr9:36087835-36087836|TT/-|frameshift_variant', 'RECK|p.N685Kfs*16|1|0.23|ENSG00000122707|chr9:36112463-36112464|-/A|frameshift_variant', 'ENSG00000122707|ENST00000377966|RECK'] 5940 6822 APGSPFRV True PC9_epitope_Rep5 829.44463714053 829.44354993586 31.213 2 -1.6601655636163735 0.433040824112934 1.0 ['ENSG00000197892|ENST00000524189|KIF13B', 'nc|ENSG00000197892|Q9NQT8-2|KIF13B'] 32439 17766 GFVFSIGR True PC9_epitope_Rep6 881.4759372688098 881.47484993586 80.97 2 -1.6602086879763445 0.433040824112934 1.0 ['ENSG00000253309|ENST00000681248|SERPINE3'] 60352 7527 LGSQEVLVPG True PC9_epitope_Rep4 997.5444107514497 997.54330993586 36.319 2 -1.660228545070453 0.4330471862200527 1.0 ['ENST00000515434.1_1_3:123337477-123339366:-|nuORF'] 91161 576 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 3.0608 3 -1.66030203268553 0.4330535481843889 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 43989 24852 IIFIKLNL True H1975_Epitope_Rep1 972.6371889374799 972.63608993586 102.91 2 -1.660309600792065 0.43305991000594724 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 39788 20456 HMEVELPYRYI True PC9_epitope_Rep5 1448.7122214358799 1448.71112993586 83.721 2 -1.6603705154278598 0.4330662716847326 1.0 ['ENSG00000126821|ENST00000247225|SGPP1'] 22969 21304 EVERRWWRRR True PC9_epitope_Rep1 1527.8283457903497 1527.8272499358602 86.773 2 -1.6605709605950094 0.43309507512427203 1.0 ['ENST00000284971.7_1_21:27102007-27107256:-|nuORF'] 70757 6549 LWWWSWRWWKL True NCI_RA007_Epitope_Rep1 1731.88267277899 1731.8810249037901 29.489 3 -1.660629910598168 0.4331205188335222 1.0 ['chr12:54282611-54283827|539|39.19|0.0|21.9|+|1|HNRNPA1,HNRNPA1|1'] 86856 16746 QLQQEYSRK True PC9_epitope_Rep5 1178.60438523906 1178.6032899358602 69.419 2 -1.6606707169453745 0.4331205188335222 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3'] 81769 23757 PLPLIKVMLLI True NCI_RA007_Epitope_Rep4 1248.82433808416 1248.82270490379 103.0 3 -1.6606840466063628 0.4331205188335222 1.0 ['ENST00000555357.1_1_12:56361683-56362031:+|nuORF'] 18183 18067 EILEPPKKRT True H1975_Epitope_Rep3 1209.70812203161 1209.70648490379 75.691 3 -1.660704797643921 0.4331205188335222 1.0 ['ENSG00000162069|ENST00000572449|BICDL2', 'nc|ENSG00000162069|A1A5D9-2|BICDL2', 'ENST00000572240.5_1_16:3078109-3079857:-|nuORF'] 73403 18873 MTLMLPFKI True PC9_epitope_Rep4 1092.60754568532 1092.6064499358602 80.681 2 -1.6607984862667429 0.4331235203698094 1.0 ['nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'ENSG00000181631|ENST00000325602|P2RY13'] 124075 8185 VGSLPGGC True NCI_RA007_Epitope_Rep2 688.3214107733601 688.3208649679301 36.473 1 -1.6608137429363123 0.4331235203698094 1.0 ['ENST00000399455.2_2_11:11974336-11974396:+|nuORF'] 95120 26895 RVEKYLRRRKY True NCI_RA007_Epitope_Rep1 1565.9266628492896 1565.92556993586 111.51 2 -1.6608271550401896 0.4331235203698094 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 25938 6064 FFTAAGTL True NCI_RA007_Epitope_Rep5 826.4225047136199 826.42140993586 30.006 2 -1.6608612682288721 0.4331235203698094 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 59099 5614 LEYDQEHI True PC9_epitope_Rep3 1045.4716397340098 1045.4705499358602 26.672 2 -1.661023301486632 0.43313624072972884 1.0 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 56753 17448 LDLPERLP True H1975_Epitope_Rep2 951.5389314481899 951.53838496793 72.405 1 -1.661028912837403 0.43313624072972884 1.0 ['ENSG00000163545|ENST00000367157|NUAK2'] 20396 25029 EPAPHRRY True PC9_epitope_Rep1 1024.52026169228 1024.5191699358602 101.2 2 -1.6613692037836112 0.43314260069561317 1.0 ['ENST00000483559.5_1_9:139835382-139837095:-|nuORF'] 92024 24374 RKRRTRSGPWR True PC9_epitope_Rep3 1454.8443302076598 1454.84269490379 99.068 3 -1.6614590124090658 0.43318261884192927 1.0 ['ENST00000263921.7_2_4:54915461-54930445:-|nuORF'] 32269 22650 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 93.563 2 -1.6616018903052479 0.43318897814477403 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 52954 20021 KPGPRARPQP True NCI_RA007_Epitope_Rep4 1102.6359601508598 1102.63486993586 86.583 2 -1.6618548105874402 0.43320655649422773 1.0 ['ENST00000298229.6_1_11:71935907-71935967:+|nuORF'] 141197 24595 YSWVIRRDSK True PC9_epitope_Rep1 1308.6938689498 1308.69223490379 99.469 3 -1.6620344984856994 0.43324171200987266 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A', 'ATP9A|p.R519Efs*8|1|0.23|ENSG00000054793|chr20:51639456-51639456|G/-|frameshift_variant'] 90310 23083 REETKKKI True PC9_epitope_Rep4 1030.6134933707797 1030.6123899358602 97.011 2 -1.6621037610044114 0.43324171200987266 1.0 ['nc|ENSG00000167257|Q8ND24-2|RNF214', 'ENSG00000167257|ENST00000300650|RNF214'] 70168 23989 LVPTGPTH True NCI_RA007_Epitope_Rep1 820.4443027873601 820.44320993586 99.284 2 -1.6622220443830797 0.4332447077036987 1.0 ['ENST00000529480.1_1_11:57457792-57467500:+|nuORF', 'ZDHHC5|p.G609Afs*6|1|0.23|ENSG00000156599|chr11:57699261-57699261|G/-|frameshift_variant', 'nc|ENSG00000156599|Q9C0B5-2|ZDHHC5', 'ENSG00000156599|ENST00000287169|ZDHHC5'] 136359 26956 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 112.43 2 -1.6622367304004344 0.4332447077036987 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 101233 10774 SLHPELLETAK True H1975_Epitope_Rep1 1236.67140216972 1236.6703099358601 46.405 2 -1.6623196921858308 0.4332447077036987 1.0 ['ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 80487 17677 PGLRNKLQ True PC9_epitope_Rep4 924.5504991913999 924.54940993586 76.019 2 -1.6623439889613263 0.4332447077036987 1.0 ['nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 123711 13180 VGRDLLRIH True NCI_RA007_Epitope_Rep4 1077.64071117813 1077.63960993586 57.807 2 -1.6623574047474663 0.4332477031286809 1.0 ['ENST00000251269.9_1_19:44471378-44471552:+|nuORF'] 39777 22645 HLWVKLRNML True PC9_epitope_Rep2 1308.7488817281198 1308.74722490379 92.598 3 -1.662432531911556 0.4332477031286809 1.0 ['ENST00000475582.5_1_2:27590224-27590551:-|nuORF'] 26310 12911 FHLSTRNPDGC True PC9_epitope_Rep6 1245.5560551476499 1245.55441490379 61.196 3 -1.6624567534060273 0.4332477031286809 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 40681 23677 HRRHPGRQ True H1975_Epitope_Rep2 1042.5645265460998 1042.56342993586 97.569 2 -1.6624632447959606 0.4332477031286809 1.0 ['chr1:18636371-18691754|145|29.1|0.08|8.45|+|1|PAX7,PAX7|1'] 4410 22769 AIPSIMNVLL True PC9_epitope_Rep5 1069.62055289717 1069.61944993586 92.574 2 -1.662686559562303 0.43328285377755343 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant'] 20105 11048 EMNEFSSFA True H1975_Epitope_Rep2 1060.417161633 1060.41657496793 47.526 1 -1.6627007140422594 0.43328285377755343 1.0 ['SPATA7|p.G142E|1|0.12|ENSG00000042317|chr14:88426284-88426284|G/A|missense_variant'] 95457 19266 RWLEKEERFLK True PC9_epitope_Rep2 1532.8463468399198 1532.84524993586 79.481 2 -1.6627823980481848 0.4332907075873828 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 64586 14329 LPSPGCHLS True PC9_epitope_Rep3 909.43783750793 909.43674993586 60.202 2 -1.662857424905262 0.4332907075873828 1.0 ['ENST00000547437.5_1_19:14693928-14693970:+|nuORF'] 80268 12783 PGDQARSK True H1975_Epitope_Rep1 857.43552900881 857.4349849679301 54.233 1 -1.6628590137345105 0.4332907075873828 1.0 ['ENSG00000165606|ENST00000374139|DRGX'] 109446 6429 TDIYVGDRAID True H1975_Epitope_Rep1 1236.59863115228 1236.5975299358602 29.789 2 -1.662920938898624 0.43329220415030845 1.0 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'CRB1|p.N1184Kfs*10|1|0.64|ENSG00000134376|chr1:197435411-197435412|-/A|frameshift_variant', 'CRB1|p.G1260Vfs*3|1|0.28|ENSG00000134376|chr1:197438575-197438576|-/T|frameshift_variant', 'nc|ENSG00000134376|P82279-2|CRB1'] 92006 27100 RKRLFPVRFLD True H1975_Epitope_Rep2 1445.8619373344097 1445.86030490379 111.87 3 -1.6629326855288877 0.43329220415030845 1.0 ['ENST00000484749.5_1_1:228360905-228363211:+|nuORF', 'ENST00000546123.2_1_1:228362303-228363211:+|nuORF', 'ENSG00000181873|ENST00000366711|IBA57'] 124926 23095 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 95.297 2 -1.6630162458986855 0.43330977779273366 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 97036 15340 SCQTNNKYRN True PC9_epitope_Rep4 1226.5462187399398 1226.54458490379 66.937 3 -1.6631439381362443 0.4333112738774915 1.0 ['PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 69763 26360 LVFRKPRGLFI True PC9_epitope_Rep1 1344.8394109846797 1344.83776490379 106.9 3 -1.6631718500500408 0.4333112738774915 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 76008 7244 NLWKCNCHL True PC9_epitope_Rep4 1129.51610491197 1129.51500993586 35.17 2 -1.6633536760482972 0.43331725754533934 1.0 ['ENSG00000144771|ENST00000273286|LRTM1', 'nc|ENSG00000144771|Q9HBL6-2|LRTM1'] 128690 4361 VPVTGGGG True H1975_Epitope_Rep1 642.3336897092199 642.33314496793 21.766 1 -1.6634066723981673 0.43331725754533934 1.0 ['ENST00000522243.5_1_8:59465814-59465859:+|nuORF'] 19596 6223 ELQLEEQK True H1975_Epitope_Rep3 1015.5185899264299 1015.51748993586 28.949 2 -1.6634413060089535 0.43331725754533934 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-3|PLEKHH2', 'ENST00000405223.6_1_2:43871812-43968195:+|nuORF'] 126228 14725 VLGPGRGF True H1975_Epitope_Rep3 801.4497225209699 801.44917496793 62.015 1 -1.6634907295082941 0.43331725754533934 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF'] 82317 16305 PPIMLIGH True NCI_RA007_Epitope_Rep4 876.4891448047999 876.48804993586 70.713 2 -1.6634948178290665 0.43331725754533934 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 34420 16029 GPISMNHGV True H1975_Epitope_Rep1 910.4330864806599 910.4325349679301 66.991 1 -1.663810008531399 0.43331725754533934 1.0 ['ENSG00000083097|ENST00000349129|DOP1A'] 55760 16157 LALTSPVPRY True PC9_epitope_Rep2 1115.6338944621898 1115.63278993586 67.402 2 -1.663821875410217 0.43331725754533934 1.0 ['nc|ENSG00000142513|Q9BZG2-3|ACP4'] 132495 22940 VVDLIRLVL True PC9_epitope_Rep1 1038.68011637862 1038.6790099358602 93.04 2 -1.663949984608121 0.43331725754533934 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 40021 7464 HPSADGTPFP True PC9_epitope_Rep1 1024.46140940348 1024.46030993586 33.527 2 -1.6642225405250888 0.43336847535945805 1.0 ['ENSG00000116176|ENST00000234798|TPSG1'] 61600 18631 LKKYHAIA True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 78.478 2 -1.6643321756146803 0.4333811852317079 1.0 ['ERLIN1|p.Q289H|1|0.56|ENSG00000107566|chr10:100152311-100152311|C/A|missense_variant'] 47622 22136 IVYLYTKKV True H1975_Epitope_Rep3 1125.6797820254499 1125.6781349037901 92.575 3 -1.6643346946378221 0.4333811852317079 1.0 ['ENST00000503574.1_1_4:109543115-109543474:+|nuORF', 'ENSG00000109475|ENST00000394667|RPL34'] 52977 16497 KPGRHSVRIT True NCI_RA007_Epitope_Rep4 1149.6730739355698 1149.67196993586 71.516 2 -1.6643532339422926 0.43338753995401785 1.0 ['ENST00000585917.5_1_19:28284461-28284521:+|nuORF'] 91200 26542 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 110.82 1 -1.6644866411463057 0.43340510957091266 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 35671 17221 GTEDRERVLRR True H1975_Epitope_Rep1 1385.7487580569698 1385.7476699358601 71.701 2 -1.6645906768862422 0.43340809689357407 1.0 ['ENST00000359867.7_2_22:38699234-38714066:-|nuORF'] 31306 14599 GDLDERRLLCH True NCI_RA007_Epitope_Rep1 1325.65101816165 1325.6499299358602 60.836 2 -1.6645921330834887 0.43340809689357407 1.0 ['ENSG00000205089|ENST00000378731|CCNI2', 'nc|ENSG00000205089|Q6ZMN8-3|CCNI2', 'nc|ENSG00000205089|Q6ZMN8-2|CCNI2'] 13244 15516 DLSSPGMT True H1975_Epitope_Rep2 806.3480194440201 806.3474749679301 64.838 1 -1.6646022864652783 0.43340809689357407 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 23531 12704 EVVRYEEEPGL True H1975_Epitope_Rep1 1318.6404959642596 1318.6393899358602 53.922 2 -1.6646053785428159 0.43340809689357407 1.0 ['ENSG00000118898|ENST00000345988|PPL'] 139859 14651 YPPGAILV True NCI_RA007_Epitope_Rep4 828.47454028648 828.47344993586 63.762 2 -1.664735846514537 0.43343201901942313 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 65998 15084 LSEAHAAC True NCI_RA007_Epitope_Rep5 800.34868815036 800.34758993586 64.688 2 -1.6647692104602725 0.43343201901942313 1.0 ['ENSG00000132702|ENST00000255039|HAPLN2'] 123162 3079 VGKTCLTF True NCI_RA007_Epitope_Rep2 867.4524249429099 867.45132993586 16.59 2 -1.6647752349193239 0.4334383726015722 1.0 ['ENSG00000134594|ENST00000257017|RAB33A'] 131973 8964 VTSEKRIL True PC9_epitope_Rep5 944.5654805492 944.56438993586 39.423 2 -1.664801488792242 0.4334398654331371 1.0 ['nc|ENSG00000064692|Q9Y6H5-4|SNCAIP', 'ENSG00000064692|ENST00000261368|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-3|SNCAIP', 'ENST00000510003.5_1_5:121726829-121776497:+|nuORF', 'nc|ENSG00000064692|Q9Y6H5-6|SNCAIP'] 38100 15372 HAWSAFCKALA True PC9_epitope_Rep4 1203.58589872395 1203.58426490379 67.061 3 -1.6649264826809744 0.4334398654331371 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 80337 8740 PGGGPGGP True NCI_RA007_Epitope_Rep2 594.2761748331001 594.2756249679301 38.643 1 -1.665092322786014 0.43344135819774154 1.0 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 109962 19216 TEHGSKMRKSI True NCI_RA007_Epitope_Rep5 1272.66085456936 1272.65920490379 80.778 3 -1.665114513045107 0.43344135819774154 1.0 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 97224 4395 SDYSFSVIAMS True PC9_epitope_Rep4 1205.52744035797 1205.52634993586 23.35 2 -1.6651665904612503 0.43344771131893517 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 48630 25877 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 107.74 3 -1.665433095412771 0.4334764911021653 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 104021 24767 SQDKLVRKRR True NCI_RA007_Epitope_Rep5 1284.7738506059998 1284.77274993586 102.75 2 -1.6654994604136681 0.43348245820579234 1.0 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 63692 16831 LMVPLLKF True NCI_RA007_Epitope_Rep3 959.58779621691 959.58668993586 74.075 2 -1.6655011782792417 0.43348245820579234 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENST00000545710.1_1_12:9659830-9660388:-|nuORF', 'ENSG00000137040|ENST00000259569|RANBP6'] 118860 16365 VAASVTAKS True H1975_Epitope_Rep1 832.46543215476 832.4648849679301 68.307 1 -1.665527415472491 0.43348245820579234 1.0 ['ENSG00000166716|ENST00000560079|ZNF592'] 3111 24403 AGAHALYL True PC9_epitope_Rep2 814.4337381036601 814.43264993586 99.435 2 -1.6655279669537078 0.43348245820579234 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 44810 16479 IMYTGRTPE True PC9_epitope_Rep3 1066.5117307241799 1066.5106299358602 68.523 2 -1.6655696849430486 0.43348245820579234 1.0 ['ENST00000590749.2_19:966789-968568:+|nuORF'] 115907 11603 TSFLGPRSF True PC9_epitope_Rep4 1010.5185303567799 1010.51742993586 52.392 2 -1.6656357794303802 0.43348245820579234 1.0 ['nc|ENSG00000115107|Q658P3-4|STEAP3'] 83933 7690 PVQQPGPG True NCI_RA007_Epitope_Rep1 778.3973525949398 778.39680496793 33.905 1 -1.6656954095603143 0.43348245820579234 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 36946 13940 GVLVEAPAK True H1975_Epitope_Rep3 882.5174677276199 882.51691496793 58.935 1 -1.665705400543046 0.43348245820579234 1.0 ['GSDMB|p.R330P|1|0.4|ENSG00000073605|chr17:39905885-39905885|C/G|missense_variant'] 70691 25235 LWLLCRGG True PC9_epitope_Rep2 916.4952928143999 916.49418993586 102.73 2 -1.6657468876605475 0.43348881015383234 1.0 ['ENSG00000256043|ENST00000433477|CTSO'] 84672 14000 QDISLHGG True NCI_RA007_Epitope_Rep2 825.39808087093 825.39753496793 59.115 1 -1.6658316225962488 0.4335015136226034 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 124128 24570 VGSQRRFVR True PC9_epitope_Rep2 1103.6312091235898 1103.63067496793 100.13 1 -1.6658634551081466 0.4335015136226034 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113943320-113958989:+|nuORF', 'ENST00000409656.5_1_2:113943320-113958989:+|nuORF', 'ENST00000464559.1_1_2:113956206-113958989:+|nuORF'] 141538 6739 YTMAPAWTWWV True NCI_RA007_Epitope_Rep1 1410.6430792469 1410.64198993586 30.223 2 -1.6659192802519063 0.43350786514334405 1.0 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 75956 9821 NLTGHKKRKH True H1975_Epitope_Rep3 1217.7105220734502 1217.70942993586 42.803 2 -1.666098930762938 0.43351719808063144 1.0 ['ENSG00000197935|ENST00000377179|ZNF311', 'ENST00000483450.1_1_6:28962780-28967471:-|nuORF'] 32578 11579 GGGTCHRC True H1975_Epitope_Rep2 789.3010267652899 789.3004749679301 49.603 1 -1.6661497920210055 0.43351719808063144 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 25434 13681 FEDVAVNFTNR True H1975_Epitope_Rep3 1310.6255146064598 1310.62440993586 57.917 2 -1.6661840918127535 0.43351719808063144 1.0 ['ENSG00000197935|ENST00000377179|ZNF311', 'ENST00000483450.1_1_6:28962780-28967471:-|nuORF', 'ZNF311|p.C215Afs*14|1|0.15|ENSG00000197935|chr6:28996360-28996360|G/-|frameshift_variant'] 131853 16755 VTRCNNVG True NCI_RA007_Epitope_Rep1 861.4126853892499 861.41213496793 69.297 1 -1.6662078592135443 0.43351719808063144 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'AMY2B|p.A275Qfs*18|1|0.25|ENSG00000240038|chr1:103574338-103574338|G/-|frameshift_variant', 'AMY1A|p.W331*|1|0.06|ENSG00000237763|chr1:103660473-103660474|GG/-|frameshift_variant', 'nc|ENSG00000240038|P19961-2|AMY2B', 'ENSG00000243480|ENST00000414303|AMY2A', 'nc|ENSG00000243480|P04746-2|AMY2A', 'CON__Q3MHH8'] 27712 15156 FPPGPAGF True H1975_Epitope_Rep2 788.38572528208 788.38462993586 63.453 2 -1.6662169240597775 0.43351719808063144 1.0 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.S1928Lfs*58|1|0.21|ENSG00000171467|chr6:43338204-43338216|TTCTAGAAGCTGA/-|frameshift_variant', 'ZNF318|p.I1646Lfs*8|1|0.7|ENSG00000171467|chr6:43339063-43339063|G/-|frameshift_variant', 'ZNF318|p.Y1061Lfs*2|1|0.21|ENSG00000171467|chr6:43342770-43342771|-/A|frameshift_variant', 'nc|ENSG00000171467|Q5VUA4-2|ZNF318'] 531 21439 AAPLPYSS True PC9_epitope_Rep5 804.4017692690401 804.40066993586 87.522 2 -1.6662973751767485 0.4335235489982847 1.0 ['ENST00000261799.8_1_5:149535034-149535298:-|nuORF'] 36178 20800 GVAVLGGF True PC9_epitope_Rep1 718.40137534622 718.40082496793 84.833 1 -1.6666096437384208 0.4335762331838565 1.0 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 10381 21888 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 94.891 2 -1.6666432105508115 0.4335762331838565 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 83449 23751 PTPHCSHS True NCI_RA007_Epitope_Rep5 864.3548361599601 864.35372993586 98.704 2 -1.6667327634702538 0.4335762331838565 1.0 ['ENST00000360535.8_1_19:36523251-36523727:-|nuORF'] 12291 20875 DILYFLLRV True PC9_epitope_Rep5 1150.6750309981799 1150.67392993586 85.348 2 -1.6667468396796599 0.4335840722845644 1.0 ['ENSG00000187554|ENST00000642603|TLR5', 'TLR5|p.H449N|1|0.27|ENSG00000187554|chr1:223111687-223111687|G/T|missense_variant'] 108727 8221 SYRNQPQA True H1975_Epitope_Rep3 962.45699272938 962.45588993586 36.605 2 -1.6667759097086565 0.4335840722845644 1.0 ['nc|ENSG00000080839|P28749-2|RBL1', 'ENSG00000080839|ENST00000373664|RBL1'] 45706 11936 IRNRITYSQ True NCI_RA007_Epitope_Rep3 1149.62545503681 1149.62380490379 54.077 3 -1.666784460960923 0.4335840722845644 1.0 ['ENSG00000203668|ENST00000366553|CHML'] 13365 16856 DLWLYSYQRLL True H1975_Epitope_Rep1 1468.77145056416 1468.7703499358602 70.246 2 -1.666900140559912 0.4336128424734317 1.0 ['nc|ENSG00000036549|Q8IYH5-3|ZZZ3'] 128363 25058 VPQYRAILWRK True PC9_epitope_Rep3 1428.8353882333997 1428.8342899358602 101.73 2 -1.6670526369097232 0.4336191917493414 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3', 'GARNL3|p.M654Wfs*2|1|0.42|ENSG00000136895|chr9:127357240-127357240|C/-|frameshift_variant'] 136364 26672 WTHGAQGG True H1975_Epitope_Rep3 812.3565504121198 812.35544993586 111.38 2 -1.667081097879473 0.4336655195220106 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 116908 7173 TVFPKDQRGP True NCI_RA007_Epitope_Rep2 1143.6036569630699 1143.60254993586 32.522 2 -1.6670990159657448 0.4336655195220106 1.0 ['KMT2C|p.A2456T|1|0.14|ENSG00000055609|chr7:152179910-152179910|C/T|missense_variant'] 110450 17681 TFDIARLTV True PC9_epitope_Rep6 1034.5760452328998 1034.57494993586 80.645 2 -1.6672792146837891 0.4337054972648193 1.0 ['ENST00000538437.5_1_11:72466777-72492157:-|nuORF', 'ENST00000535267.1_1_11:72470267-72492328:-|nuORF', 'ENSG00000214530|ENST00000334805|STARD10'] 13243 15299 DLSSPGMT True H1975_Epitope_Rep1 806.3480194440201 806.3474749679301 64.116 1 -1.6674673261062989 0.4337084697125947 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 63287 14110 LLSRLEEL True PC9_epitope_Rep3 971.5651461960299 971.56404993586 59.36 2 -1.6674695252430802 0.4337084697125947 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 18173 11963 EIKWIDFIR True PC9_epitope_Rep1 1218.67609362734 1218.6749899358601 50.881 2 -1.6674899100287104 0.4337084697125947 1.0 ['ENST00000438469.2_1_1:146553889-146554591:-|nuORF'] 62583 18641 LLKSRDEL True PC9_epitope_Rep1 972.5603951687599 972.55928993586 76.492 2 -1.6675001690981845 0.4337084697125947 1.0 ['ENST00000357461.6_1_14:67937818-67938346:-|nuORF'] 81208 24419 PKGRQRKLWKD True PC9_epitope_Rep1 1410.8208007984197 1410.8197099358601 98.771 2 -1.6675979542858996 0.43372602647596203 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 114158 14049 TPKLEHLD True PC9_epitope_Rep6 951.5025459394699 951.50144993586 65.908 2 -1.667758129554508 0.4337338593974175 1.0 ['nc|ENSG00000234616|O75564|JRK', 'ENSG00000234616|ENST00000612905|JRK', 'JRK|p.R91C|1|0.53|ENSG00000234616|chr8:142665788-142665788|G/A|missense_variant'] 117262 23316 TVLVHLEIKVL True PC9_epitope_Rep6 1262.79620876002 1262.7951099358602 102.79 2 -1.667777375889975 0.4337338593974175 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 109379 16243 TCWEWYWP True H1975_Epitope_Rep2 1169.46405225577 1169.46241490379 67.687 3 -1.6677914624015089 0.4337338593974175 1.0 ['ENST00000409198.5_2_2:152506865-152507290:-|nuORF'] 44374 22127 ILERNSTNV True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 90.146 2 -1.667831716448212 0.43376262371521124 1.0 ['nc|ENSG00000188171|Q68DY1-2|ZNF626', 'ENSG00000188171|ENST00000601440|ZNF626', 'nc|ENSG00000231205|Q6ZT77|ZNF826P', 'ENST00000502675.1_19:20577295-20577979:-|nuORF'] 11407 5165 DETIAAKQIEK True NCI_RA007_Epitope_Rep2 1244.66123140884 1244.6601299358601 24.71 2 -1.6683522189914184 0.4338104257966174 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 54284 23550 KWVILPLLK True H1975_Epitope_Rep2 1108.7372373319197 1108.73614993586 97.068 2 -1.668435554063896 0.4338104257966174 1.0 ['ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 120553 18578 VEGFRKLL True PC9_epitope_Rep4 960.5756513100798 960.57454993586 79.537 2 -1.6684408854293682 0.4338104257966174 1.0 ['SLC39A6|p.A691Lfs*64|1|0.31|ENSG00000141424|chr18:36111103-36111104|-/AA|frameshift_variant', 'ENSG00000141424|ENST00000269187|SLC39A6'] 3371 17441 AGHGHSAE True NCI_RA007_Epitope_Rep3 764.3201649034 764.3190699358599 76.525 2 -1.6684858137333363 0.4338104257966174 1.0 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'ENST00000432829.6_1_9:214876-286471:+|nuORF'] 12202 8856 DIGCFAIYFL True NCI_RA007_Epitope_Rep1 1160.55761828744 1160.55652993586 38.448 2 -1.6686117772592992 0.4338294629247736 1.0 ['nc|ENSG00000178802|P34949-2|MPI', 'ENSG00000178802|ENST00000352410|MPI'] 49735 23595 KGRGGLGT True NCI_RA007_Epitope_Rep4 744.4242360491199 744.4236849679301 102.36 1 -1.6686240410487563 0.4338294629247736 1.0 ['ENST00000441747.6_1_19:1482202-1488015:-|nuORF', 'ENSG00000115257|ENST00000300954|PCSK4', 'PCSK4|p.Q355Rfs*28|1|1.0|ENSG00000115257|chr19:1486858-1486858|G/-|frameshift_variant'] 4281 24575 AIGHFLCL True NCI_RA007_Epitope_Rep3 872.4578446765199 872.45674993586 106.3 2 -1.6686421828705957 0.4338294629247736 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026'] 3690 6959 AGRGHCGE True NCI_RA007_Epitope_Rep2 785.3238703848499 785.32332496793 31.69 1 -1.6687347087571296 0.4338470159708602 1.0 ['nc|ENSG00000177427|Q96C03-2|MIEF2'] 25709 19489 FERRRKRSR True NCI_RA007_Epitope_Rep5 1289.75411822093 1289.75302993586 81.852 2 -1.6687831235773802 0.43385336112792233 1.0 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 123257 22197 VGLKFMQV True PC9_epitope_Rep2 920.51535955264 920.5148149679301 90.863 1 -1.6688954308902084 0.4338548437710136 1.0 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF'] 76251 9887 NPIFWEEVS True H1975_Epitope_Rep3 1119.5236753068698 1119.52317496793 43.061 1 -1.6688969037959487 0.4338548437710136 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 70729 17842 LWRRRGALRFR True NCI_RA007_Epitope_Rep1 1485.8905521240897 1485.88944993586 73.54 2 -1.6689986611498766 0.43387239574577774 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|347|3|anti-sense'] 97218 5362 SDYSFSVIAMS True PC9_epitope_Rep1 1205.52744035797 1205.52634993586 25.463 2 -1.6691058395528287 0.43388994732713215 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 55616 18394 LAIIVYMVP True H1975_Epitope_Rep2 1017.5932755201699 1017.5921699358599 76.303 2 -1.6691602409987782 0.4338914290837368 1.0 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'ENST00000495425.6_1_17:19458825-19480863:+|nuORF'] 126860 14482 VLQEILILPT True H1975_Epitope_Rep3 1137.7009113928498 1137.69980993586 61.064 2 -1.6692470199795775 0.4338914290837368 1.0 ['ENSG00000109805|ENST00000251496|NCAPG'] 82262 21371 PPFTVILV True PC9_epitope_Rep6 884.5371405430399 884.53604993586 95.078 2 -1.6694287412656392 0.4339153237555192 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1'] 128312 17126 VPPPPPLPCA True NCI_RA007_Epitope_Rep4 986.52592423634 986.52482993586 74.192 2 -1.6694951220264267 0.4339153237555192 1.0 ['ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 44609 18044 ILQWLVPVV True PC9_epitope_Rep2 1065.65865265805 1065.65754993586 74.711 2 -1.669568268353284 0.4339328738723595 1.0 ['chr1:245814415-245816795|243|17.47|0.01|10.93|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|67', 'chr1:245764149-245816795|240|34.92|0.05|9.6|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|67'] 45083 11841 IPISRQEP True PC9_epitope_Rep2 938.5185303567799 938.51742993586 50.875 2 -1.669829352555097 0.4339582469548068 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2'] 8487 23135 ATRSRLRRRTP True PC9_epitope_Rep6 1368.8174467534798 1368.8163499358602 102.09 2 -1.6699263366133403 0.4339582469548068 1.0 ['ENST00000401903.5_1_7:1197885-1199768:-|nuORF'] 100434 8952 SLAEQPHGAV True PC9_epitope_Rep4 1007.5036085686299 1007.50250993586 41.978 2 -1.6699877947898614 0.4339582469548068 1.0 ['ENST00000262518.8_1_16:30724671-30724962:+|nuORF'] 81209 22428 PKGRQRKLWKD True PC9_epitope_Rep6 1410.8208007984197 1410.8197099358601 99.264 2 -1.6700122299521487 0.4339582469548068 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 117762 7002 TVVMGGSR True H1975_Epitope_Rep3 805.41162276009 805.41052993586 31.897 2 -1.6701068404514205 0.433982138254838 1.0 ['ENST00000415344.1_1_9:132892058-132895470:+|nuORF'] 136226 12517 WRSYRDWPWRR True NCI_RA007_Epitope_Rep1 1662.8280114371798 1662.8269099358602 52.667 2 -1.6702063216022223 0.433982138254838 1.0 ['ENST00000253329.2_1_6:149862180-149862721:-|nuORF'] 42874 10236 IEQSVYSSDP True PC9_epitope_Rep1 1123.50333378511 1123.5022299358602 44.254 2 -1.6703104943862441 0.4339884807601802 1.0 ['nc|ENSG00000162761|Q8TE12-2|LMX1A', 'ENSG00000162761|ENST00000342310|LMX1A'] 57102 8693 LDSSFRNEI True NCI_RA007_Epitope_Rep4 1079.52473793603 1079.52364993586 40.226 2 -1.670352609773201 0.4339948231233822 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 40945 17542 HSVELLLP True PC9_epitope_Rep3 906.5174677276199 906.51636993586 72.66 2 -1.670393210870549 0.43400116534444894 1.0 ['nc|ENSG00000122417|Q9ULJ1-3|ODF2L', 'nc|ENSG00000122417|Q9ULJ1|ODF2L', 'ENST00000480440.5_1_1:86847891-86851212:-|nuORF', 'nc|ENSG00000122417|Q9ULJ1-6|ODF2L', 'nc|ENSG00000122417|Q9ULJ1-2|ODF2L', 'ENSG00000122417|ENST00000460698|ODF2L'] 124331 5806 VGTRGPYD True PC9_epitope_Rep2 863.4137309350699 863.41262993586 27.728 2 -1.6705423685748382 0.43400264437621855 1.0 ['nc|ENSG00000162398|Q3ZCV2-2|CIMAP2', 'ENSG00000162398|ENST00000371273|LEXM'] 142933 18583 YYYRDRDWRWV True NCI_RA007_Epitope_Rep1 1676.7848092125198 1676.78370993586 76.422 2 -1.670580805856837 0.43400264437621855 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 48589 26546 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 110.5 3 -1.6706511844880465 0.4340104651032505 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 32408 6084 GFRDWFEIQWI True NCI_RA007_Epitope_Rep2 1495.72483472491 1495.72318490379 28.272 3 -1.670678905984604 0.4340104651032505 1.0 ['ENSG00000112619|ENST00000230381|PRPH2'] 32708 16393 GGTTIHFP True PC9_epitope_Rep1 828.41300265908 828.4124549679301 67.878 1 -1.670718486061184 0.4340104651032505 1.0 ['GUCY2F|p.P437T|1|0.23|ENSG00000101890|chrX:109453583-109453583|G/T|missense_variant'] 18081 11903 EIHDHMEQ True PC9_epitope_Rep1 1037.42364399577 1037.4225499358602 50.651 2 -1.670857803574795 0.434018285304531 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000471834.1_1_6:152657861-152688565:-|nuORF'] 86433 12079 QKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 54.266 3 -1.6709044438640628 0.434018285304531 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.S888Vfs*11|1|0.08|ENSG00000129292|chr8:132842787-132842787|T/-|frameshift_variant', 'EFR3A-PHF20L1|1|fusion', 'AluSz6_dup36815|chr15:60362892-60363058:+|2.1165286470035847|0.0012375329650786|10.74|541.0|7|3|sense', 'AluSq2_dup6975|chr2:85662561-85662866:+|1.1952018569487497|0.2456125885695712|2.28|514.0|3|1|sense', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 4365 10582 AILRCQDV True PC9_epitope_Rep2 916.48003667308 916.47892993586 46.021 2 -1.6709088458198538 0.434018285304531 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 61872 23033 LLCRTLAHL True PC9_epitope_Rep3 1038.6008205121 1038.59972993586 93.865 2 -1.6712007612870254 0.43403583072837887 1.0 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2580597-2582974:-|nuORF', 'ENST00000493232.5_1_7:2580815-2581753:-|nuORF', 'ENST00000469750.5_1_7:2580597-2582612:-|nuORF'] 122446 4790 VGDYWRNF True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 23.52 2 -1.6712439853460164 0.43404217177941606 1.0 ['ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant'] 3121 16595 AGALPPDY True NCI_RA007_Epitope_Rep2 802.3861192049001 802.3855749679301 69.281 1 -1.6712915402793258 0.4340548534552299 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant', 'RYR2|p.N3207Kfs*49|1|0.52|ENSG00000198626|chr1:237706985-237706986|-/T|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 53877 22701 KTKGAGGG True PC9_epitope_Rep2 674.3711378470998 674.3705849679301 92.815 1 -1.671312460930275 0.4340548534552299 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 101665 8544 SLLVGGAG True H1975_Epitope_Rep3 672.3806399016399 672.3800949679301 37.852 1 -1.671346306718605 0.4340588558178091 1.0 ['ENST00000262735.9_1_22:46639202-46639412:+|nuORF'] 121104 7612 VERHHPGA True H1975_Epitope_Rep3 901.45184777929 901.45074993586 34.26 2 -1.6715196829985406 0.4340588558178091 1.0 ['ENST00000263266.3_1_19:49114075-49116267:-|nuORF'] 139384 13059 YLMWRNWQHKN True H1975_Epitope_Rep1 1574.7564862897 1574.7553899358602 55.317 2 -1.6715650301165526 0.4340588558178091 1.0 ['nc|ENSG00000147852|P98155-2|VLDLR', 'ENSG00000147852|ENST00000382100|VLDLR'] 14370 8875 DTAGRSESSDP True H1975_Epitope_Rep1 1120.46325987828 1120.4621699358602 39.051 2 -1.6715790055333395 0.4340588558178091 1.0 ['nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000104972|Q8NHL6-5|LILRB1'] 29836 6424 FVSFRQVCFC True NCI_RA007_Epitope_Rep1 1234.5627207512198 1234.56162993586 29.011 2 -1.671634496155532 0.4340588558178091 1.0 ['ENST00000513482.1_1_5:175387875-175387965:-|nuORF'] 80538 5995 PGPLSKQGS True NCI_RA007_Epitope_Rep3 869.46068112749 869.45958993586 30.559 2 -1.6716641698767587 0.4340588558178091 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 120155 16572 VEAPAPPA True H1975_Epitope_Rep2 750.3912045853399 750.39010993586 68.971 2 -1.6716830464146635 0.4340588558178091 1.0 ['nc|ENSG00000197558|A2VEC9-2|SSPOP', 'ENST00000413907.1_3_7:44153975-44154110:+|nuORF'] 124979 14135 VHVKQCIV True PC9_epitope_Rep2 924.5215075622399 924.52095496793 59.641 1 -1.6716869317123801 0.4340588558178091 1.0 ['ENSG00000165475|ENST00000298248|CRYL1', 'nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'CRYL1|p.H161Tfs*15|1|0.41|ENSG00000165475|chr13:20432254-20432254|G/-|frameshift_variant'] 117919 7174 TWRWPWLRWWQ True NCI_RA007_Epitope_Rep2 1699.8524352798697 1699.85077490379 32.526 3 -1.671698639721907 0.4340588558178091 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant'] 53115 15457 KPTDQRFEDLT True PC9_epitope_Rep2 1348.6622940379998 1348.6611899358602 64.733 2 -1.6717059077649314 0.4340588558178091 1.0 ['nc|ENSG00000188659|Q658L1-2|SAXO2', 'nc|ENSG00000188659|Q658L1|SAXO2', 'ENSG00000188659|ENST00000682753|SAXO2'] 113250 7072 TLRDGISP True H1975_Epitope_Rep3 857.4606811274899 857.45958993586 32.17 2 -1.6717059986263247 0.4340588558178091 1.0 ['ENST00000491595.1_1_7:73624266-73629245:+|nuORF'] 121962 10300 VFTMIDIF True PC9_epitope_Rep2 984.4990407821599 984.49794993586 44.947 2 -1.6717216041880523 0.4340588558178091 1.0 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A'] 113929 21233 TNTPPVIDVP True PC9_epitope_Rep1 1051.55497543515 1051.5538699358601 86.497 2 -1.6717273377527628 0.4340588558178091 1.0 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000525495.6_2_17:45219385-45266538:-|nuORF'] 87590 22892 QQLQRSVLHP True PC9_epitope_Rep2 1204.6676542019597 1204.66654993586 93.553 2 -1.6717777682641655 0.4340651954744035 1.0 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1'] 97139 19798 SDPLGHCP True NCI_RA007_Epitope_Rep5 824.34868815036 824.34758993586 83.064 2 -1.6718942982086262 0.4340827368350304 1.0 ['ENST00000495313.5_2_9:131038987-131046858:+|nuORF'] 80042 8827 PFGWRICLAHE True H1975_Epitope_Rep1 1327.6495616096702 1327.64846993586 38.876 2 -1.6723038369440972 0.43415923652493393 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2'] 41906 13182 IDAQDRVLLLH True PC9_epitope_Rep2 1291.72483472491 1291.72372993586 55.978 2 -1.672347123582557 0.43415923652493393 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 136362 27135 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 112.05 2 -1.6723951539839839 0.43415923652493393 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 79755 19340 PEAQDPGG True H1975_Epitope_Rep1 769.3242472243298 769.32369496793 80.567 1 -1.6724215594058105 0.43415923652493393 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000565140.5_3_16:28489128-28499933:-|nuORF', 'ENST00000564574.5_2_16:28493646-28503072:-|nuORF', 'nc|ENSG00000261832|Q13286-4|CLN3', 'ENST00000566083.6_2_16:28493835-28503080:-|nuORF'] 95716 8420 RYFWQPSP True H1975_Epitope_Rep3 1079.5188647099499 1079.51776993586 37.371 2 -1.6724596638241849 0.43415923652493393 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'CSMD3|p.K2636*|1|0.27|ENSG00000164796|chr8:112306173-112306174|-/T|frameshift_variant', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.G3441Afs*4|1|0.37|ENSG00000164796|chr8:112244476-112244476|A/-|frameshift_variant', 'CSMD3|p.I3465Ffs*10|1|0.57|ENSG00000164796|chr8:112244404-112244404|G/-|frameshift_variant', 'CSMD3|p.Y3650Ffs*51|1|0.41|ENSG00000164796|chr8:112228771-112228771|T/-|frameshift_variant', 'CSMD3|p.P1779Qfs*14|1|0.09|ENSG00000164796|chr8:112472650-112472650|G/-|frameshift_variant', 'CSMD3|p.G1744Efs*49|1|0.34|ENSG00000164796|chr8:112492536-112492536|C/-|frameshift_variant', 'CSMD3|p.R1946Pfs*18|1|0.24|ENSG00000164796|chr8:112390761-112390761|C/-|frameshift_variant', 'CSMD3|p.V2384Cfs*22|1|0.31|ENSG00000164796|chr8:112335344-112335345|-/A|frameshift_variant', 'CSMD3|p.S2465Yfs*11|1|0.21|ENSG00000164796|chr8:112314583-112314584|AG/-|frameshift_variant', 'CSMD3|p.C1584S|1|0.28|ENSG00000164796|chr8:112517039-112517039|C/G|missense_variant'] 62455 20806 LLHSVLKIK True PC9_epitope_Rep2 1049.69610079593 1049.69500993586 85.472 2 -1.6724746197896954 0.43416557456007704 1.0 ['nc|ENSG00000074527|Q9HB63-2|NTN4'] 91599 15321 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 64.089 3 -1.6725604954098774 0.43417338709677417 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 125439 16476 VITTLTTL True PC9_epitope_Rep4 860.5218844017201 860.52078993586 71.346 2 -1.6725675429210667 0.43417338709677417 1.0 ['HTR1E|p.I128Lfs*14|1|0.13|ENSG00000168830|chr6:87015716-87015716|A/-|frameshift_variant', 'ENSG00000168830|ENST00000305344|HTR1E'] 57901 14286 LEGAPTRMV True PC9_epitope_Rep3 972.50625142092 972.50514993586 60.039 2 -1.6725790343547342 0.43417338709677417 1.0 ['nc|ENSG00000100767|O95428-2|PAPLN', 'ENST00000557061.5_1_14:73729237-73739369:+|nuORF'] 5871 16055 APGCRKGW True H1975_Epitope_Rep3 873.4279415305698 873.42739496793 67.213 1 -1.6727450363988634 0.434186062140185 1.0 ['ENST00000564313.1_1_16:2141057-2141975:-|nuORF'] 102849 14423 SNWEVMERL True PC9_epitope_Rep1 1162.54409348162 1162.54243490379 60.302 3 -1.6727856778510097 0.434186062140185 1.0 ['ENSG00000197976|ENST00000313871|AKAP17A', 'nc|ENSG00000292343|Q02040-2|AKAP17A', 'nc|ENSG00000292343|Q02040-3|AKAP17A'] 45036 5988 IPGGNQRFLE True NCI_RA007_Epitope_Rep5 1129.58800689893 1129.5869099358601 29.717 2 -1.6729035080340922 0.43419048472359106 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 85200 10762 QEQASSGWGS True H1975_Epitope_Rep2 1035.4257521707498 1035.42464993586 46.425 2 -1.6729048314933939 0.43419048472359106 1.0 ['ENSG00000102981|ENST00000458121|PARD6A', 'nc|ENSG00000102981|Q9NPB6|PARD6A'] 10216 3771 CCCCCCCS True PC9_epitope_Rep2 826.10688658094 826.10578993586 19.77 2 -1.6729512992812225 0.43419048472359106 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 130783 7178 VTAGAGGG True NCI_RA007_Epitope_Rep5 588.2867395168 588.2861949679301 34.287 1 -1.6729968869238443 0.43419048472359106 1.0 ['RASA1|p.E688Sfs*2|1|0.33|ENSG00000145715|chr5:87376407-87376408|-/AGTTGAGCCGATTACAGAAAGGGCATGCCACAGAT|frameshift_variant', 'RASA1|p.L971*|1|0.29|ENSG00000145715|chr5:87386886-87386886|T/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.S219Ffs*4|1|0.2|ENSG00000145715|chr5:87331460-87331461|-/T|frameshift_variant', 'RASA1|p.D421Tfs*3|1|0.27|ENSG00000145715|chr5:87353161-87353161|G/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1'] 113615 5649 TLVPAHPAL True NCI_RA007_Epitope_Rep4 917.53345214493 917.53234993586 28.333 2 -1.6730030135549034 0.43419048472359106 1.0 ['ENSG00000138629|ENST00000395081|UBL7'] 82041 14270 PLWPLRLSF True PC9_epitope_Rep6 1127.64915060351 1127.6480499358602 66.781 2 -1.6730131444625185 0.43419048472359106 1.0 ['ENST00000291295.13_1_19:47113260-47113362:+|nuORF'] 20033 10344 ELYYIFATV True PC9_epitope_Rep5 1117.5695628701299 1117.56846993586 44.773 2 -1.6731429125626913 0.43421922073267705 1.0 ['ENSG00000100926|ENST00000261789|TM9SF1'] 141709 15861 YTVGLGQTRM True PC9_epitope_Rep1 1124.5648289262 1124.56372993586 65.818 2 -1.6733604062590735 0.43424367630756827 1.0 ['nc|ENSG00000134240|P54868-3|HMGCS2', 'nc|ENSG00000134240|P54868-2|HMGCS2', 'ENSG00000134240|ENST00000369406|HMGCS2'] 26762 8294 FKEWFWLERFW True NCI_RA007_Epitope_Rep1 1672.8190694629197 1672.8179699358602 36.263 2 -1.6735118726411855 0.43424367630756827 1.0 ['CERS3|p.A61Gfs*11|1|0.35|ENSG00000154227|chr15:100490923-100490924|-/C|frameshift_variant', 'CERS3|p.T232Pfs*3|1|0.17|ENSG00000154227|chr15:100472969-100472969|C/-|frameshift_variant', 'ENSG00000154227|ENST00000679737|CERS3'] 56565 9224 LDGRVLYWP True PC9_epitope_Rep6 1117.59202965021 1117.59092993586 45.624 2 -1.6735586293307665 0.43424367630756827 1.0 ['ENSG00000016391|ENST00000315251|CHDH'] 104622 8687 SQSQLLREL True H1975_Epitope_Rep1 1072.58767254576 1072.58656993586 38.345 2 -1.673604816697902 0.43424367630756827 1.0 ['nc|ENSG00000124074|Q9H0I2-2|ENKD1', 'ENSG00000124074|ENST00000243878|ENKD1'] 134844 8444 VYVEGDIK True NCI_RA007_Epitope_Rep2 921.4807478657298 921.4801949679301 37.487 1 -1.6736545165949883 0.43424367630756827 1.0 ['ENST00000429744.2_1_1:52645740-52646091:+|nuORF'] 13246 15381 DLSSPGMT True H1975_Epitope_Rep3 806.3480194440201 806.3474749679301 64.573 1 -1.6736784000130693 0.43424367630756827 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 45403 17040 IQETIVPKEPP True NCI_RA007_Epitope_Rep1 1249.6918032611297 1249.69070993586 70.411 2 -1.6737541675483005 0.43424367630756827 1.0 ['ENSG00000099995|ENST00000215793|SF3A1'] 141563 10548 YTNVTEGLK True H1975_Epitope_Rep2 1023.5236753068699 1023.5225699358599 45.593 2 -1.6737962896967769 0.43424367630756827 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000589793.1_1_17:76539878-76567391:-|nuORF'] 128034 11105 VPKKEKVP True PC9_epitope_Rep2 923.5804023373498 923.57930993586 48.038 2 -1.6738578458762385 0.43424367630756827 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 132003 21948 VTSPMEGTVRK True PC9_epitope_Rep1 1203.62815745875 1203.62650490379 89.241 3 -1.6739198385192626 0.43424367630756827 1.0 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 52365 16344 KKKRIIYDS True NCI_RA007_Epitope_Rep4 1149.6869926642098 1149.6853349037901 70.863 3 -1.6739273236112417 0.43424367630756827 1.0 ['ENSG00000035928|ENST00000349703|RFC1', 'nc|ENSG00000035928|P35251|RFC1', 'ENST00000504849.5_1_4:39324953-39367861:-|nuORF', 'RFC1|p.F225Lfs*5|1|0.37|ENSG00000035928|chr4:39323385-39323385|A/-|frameshift_variant'] 43188 3455 IFICSEYW True PC9_epitope_Rep2 1059.47355431031 1059.4724499358601 18.57 2 -1.6739682241400624 0.43424367630756827 1.0 ['ENST00000356384.4_1_9:137328607-137328931:+|nuORF'] 82568 21157 PPVISPHLK True PC9_epitope_Rep6 986.59130137422 986.59020993586 94.228 2 -1.6740253911503642 0.43424367630756827 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant'] 139484 12213 YLRNELPTV True PC9_epitope_Rep4 1103.59750895347 1103.59640993586 54.797 2 -1.6740847496192497 0.43424367630756827 1.0 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 32585 11991 GGHGFPGP True H1975_Epitope_Rep3 724.3292730351199 724.32872496793 51.282 1 -1.674122831828888 0.43424367630756827 1.0 ['nc|ENSG00000126456|Q14653-4|IRF3'] 48583 25816 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 107.09 3 -1.6741231301262587 0.43424367630756827 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 101139 11394 SLGQYTSI True PC9_epitope_Rep5 867.43379767331 867.43270993586 48.825 2 -1.6741394611718634 0.43424367630756827 1.0 ['ENSG00000157103|ENST00000287766|SLC6A1', 'SLC6A1|p.G111V|1|0.44|ENSG00000157103|chr3:11017936-11017936|G/T|missense_variant'] 4830 19751 ALEHDIVQDIP True PC9_epitope_Rep5 1248.6350166609998 1248.6339099358602 81.017 2 -1.6742382906665638 0.43424367630756827 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A'] 124642 7351 VGWRGTGSGKL True PC9_epitope_Rep2 1116.60399131624 1116.60288993586 33.656 2 -1.674342942508437 0.43427240560756036 1.0 ['ENST00000370406.7_1_X:149106790-149106904:-|nuORF'] 34229 23889 GNPHKTSA True H1975_Epitope_Rep1 810.3984152241001 810.39730993586 99.157 2 -1.674448236236849 0.43428507445974696 1.0 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000545752.1_1_12:122399919-122407612:+|nuORF'] 105336 16600 SRPPRGVG True NCI_RA007_Epitope_Rep5 824.4616841869998 824.46058993586 70.612 2 -1.674460393953074 0.43428507445974696 1.0 ['ENST00000505713.1_1_4:106394627-106395207:-|nuORF'] 38655 14729 HFPGQAYRAS True NCI_RA007_Epitope_Rep5 1132.5413910596799 1132.54028993586 63.328 2 -1.674560071260406 0.4342987651280214 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 139284 23329 YLKEFRTEQ True PC9_epitope_Rep2 1212.6138872936 1212.61225490379 95.208 3 -1.6745833899317248 0.4342987651280214 1.0 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'ENSG00000059145|ENST00000389221|UNKL', 'nc|ENSG00000059145|Q9H9P5-5|UNKL', 'nc|ENSG00000059145|Q9H9P5-6|UNKL', 'ENST00000503648.1_1_16:1451355-1464692:-|nuORF', 'ENSG00000132478|ENST00000589666|UNK'] 113870 23450 TNLRQIMVISV True PC9_epitope_Rep1 1272.72239219676 1272.72073490379 94.984 3 -1.6747083406162862 0.4342987651280214 1.0 ['ENST00000523958.5_1_8:23291828-23307413:-|nuORF', 'nc|ENSG00000197217|Q9Y227-2|ENTPD4', 'ENSG00000197217|ENST00000358689|ENTPD4'] 62233 9731 LLFAHIAA True PC9_epitope_Rep1 854.5014237406599 854.50032993586 42.288 2 -1.6748506983933416 0.4342987651280214 1.0 ['ENSG00000112818|ENST00000230588|MEP1A'] 56976 7874 LDRCLVHML True PC9_epitope_Rep1 1098.5678061316598 1098.5667099358602 35.113 2 -1.6749375553408499 0.4342987651280214 1.0 ['ENST00000428642.1_1_1:225635121-225653038:-|nuORF'] 62415 24447 LLHATLTT True H1975_Epitope_Rep3 868.5018176634801 868.50072993586 101.76 2 -1.6749409627489837 0.4342987651280214 1.0 ['ENST00000541199.5_3_6:142623767-142688843:+|nuORF', 'ENST00000435011.6_3_6:142623767-142688843:+|nuORF'] 89887 3092 RCAPRGKA True PC9_epitope_Rep3 857.4653896684499 857.46428993586 16.854 2 -1.6749560413507834 0.4342987651280214 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 88123 3019 QRRWAGPCLW True NCI_RA007_Epitope_Rep1 1271.6345802518697 1271.63348993586 15.613 2 -1.6750136187158222 0.4342987651280214 1.0 ['ENST00000361470.3_1_X:75648135-75648333:+|nuORF'] 49891 14811 KIHSRKMNL True PC9_epitope_Rep2 1125.64408230641 1125.64243490379 62.235 3 -1.6750320760797595 0.4342987651280214 1.0 ['nc|ENSG00000087191|P62195-2|PSMC5', 'ENSG00000087191|ENST00000310144|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF', 'ENST00000584657.1_1_17:61908799-61909039:+|nuORF'] 86440 25705 QKKLKKKKKK True NCI_RA007_Epitope_Rep4 1283.9129102781096 1283.91127490379 112.22 3 -1.6752387809721994 0.4342987651280214 1.0 ['ENST00000378026.4_3_12:106631761-106631812:-|nuORF'] 85691 26666 QGVHISKV True PC9_epitope_Rep1 866.49740098938 866.49630993586 108.38 2 -1.6752836029410987 0.4342987651280214 1.0 ['ENSG00000130821|ENST00000253122|SLC6A8', 'nc|ENSG00000130821|P48029-3|SLC6A8', 'nc|ENSG00000130821|P48029-4|SLC6A8', 'ENST00000413787.1_3_X:152958605-152959714:+|nuORF', 'ENST00000485324.1_1_X:152958408-152959565:+|nuORF', 'nc|ENSG00000130821|P48029-2|SLC6A8'] 33181 20394 GIVSWTLIN True PC9_epitope_Rep6 1001.5545815123301 1001.55348993586 91.143 2 -1.675325403337909 0.43430509840800696 1.0 ['DHCR7|p.A247S|1|0.16|ENSG00000172893|chr11:71438971-71438971|C/A|missense_variant'] 60643 2691 LHKYYMKRRTL True NCI_RA007_Epitope_Rep2 1507.8445730181097 1507.84237987172 14.693 4 -1.6754516812651779 0.4343158436789844 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA'] 59522 16250 LFRWEQDEIPR True PC9_epitope_Rep5 1487.75211210191 1487.75100993586 67.495 2 -1.675545692352035 0.4343158436789844 1.0 ['ENST00000460981.1_1_6:111714035-111726820:-|nuORF'] 56520 8988 LDFRPRQFV True NCI_RA007_Epitope_Rep1 1176.6403768249597 1176.63874490379 38.962 3 -1.675555503352113 0.4343158436789844 1.0 ['ENSG00000162878|ENST00000294964|PKDCC'] 63091 15240 LLQNTVHI True H1975_Epitope_Rep2 936.53926580136 936.53816993586 63.778 2 -1.6755974707593468 0.4343158436789844 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'KIF5B-MET|1|fusion'] 12238 7644 DIKDNDRTL True PC9_epitope_Rep3 1088.5462016566 1088.5451099358602 34.403 2 -1.6756013034453996 0.4343158436789844 1.0 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1', 'AGTPBP1|p.Q781Hfs*20|1|0.13|ENSG00000135049|chr9:85596435-85596442|TGAGTGGT/-|frameshift_variant'] 139576 15026 YLVRVDEKHRR True NCI_RA007_Epitope_Rep1 1469.82152907441 1469.8204299358601 62.514 2 -1.6756840599233167 0.4343158436789844 1.0 ['ENSG00000112972|ENST00000325110|HMGCS1'] 136107 8794 WRLRHFVSWLW True NCI_RA007_Epitope_Rep2 1584.84662162344 1584.8455299358602 38.853 2 -1.6757154325715613 0.4343158436789844 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 124345 14320 VGTTIFTGF True H1975_Epitope_Rep2 941.4858332461699 941.48472993586 60.23 2 -1.6758026102190984 0.43431731425820824 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15'] 11110 2119 DDDDDNSQ True NCI_RA007_Epitope_Rep2 922.2788131535401 922.27770993586 11.569 2 -1.675861398562371 0.43431731425820824 1.0 ['CON__P31096'] 21019 20610 EQSLLSRWNPW True H1975_Epitope_Rep3 1414.69934825306 1414.69824993586 86.138 2 -1.6759580499730857 0.434318784771585 1.0 ['ENSG00000188001|ENST00000345063|TPRG1'] 9172 21861 AVLHTRQDL True PC9_epitope_Rep1 1051.57744221523 1051.5763499358602 88.9 2 -1.676021586607501 0.434318784771585 1.0 ['ENST00000409299.7_1_20:32298376-32298511:-|nuORF'] 65459 18627 LRKDDALSLK True NCI_RA007_Epitope_Rep5 1157.67682190333 1157.67572993586 78.463 2 -1.676254755791355 0.43433778096176234 1.0 ['ENSG00000146909|ENST00000275820|NOM1', 'ENST00000475176.1_1_7:156752694-156752904:+|nuORF'] 111395 20003 THSGERPFNC True H1975_Epitope_Rep2 1146.4876412346598 1146.48598490379 82.92 3 -1.6763197581844937 0.43433778096176234 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 114596 22127 TQDNPPVF True NCI_RA007_Epitope_Rep4 916.4290466460399 916.4279499358599 95.963 2 -1.676383125431913 0.43433778096176234 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 56586 22322 LDHGGASL True PC9_epitope_Rep3 768.3766171503601 768.37552993586 91.148 2 -1.6765961537821341 0.43434219068299346 1.0 ['ENST00000356208.9_1_20:55983752-55984013:+|nuORF'] 119874 10998 VDFVLLGSS True PC9_epitope_Rep1 935.4963979298699 935.49530993586 47.192 2 -1.67662186242082 0.43434219068299346 1.0 ['ENST00000296674.12_1_5:81573566-81574204:-|nuORF'] 70428 964 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 5.0481 3 -1.6767168747777377 0.43434219068299346 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 100580 9063 SLCKLYFRELP True H1975_Epitope_Rep3 1367.7271432240298 1367.7260499358601 39.847 2 -1.6767896091046597 0.43434219068299346 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32', 'ARHGAP31|p.R256Pfs*6|1|0.22|ENSG00000031081|chr3:119390865-119390866|-/C|frameshift_variant', 'nc|ENSG00000134909|A7KAX9-3|ARHGAP32', 'ENST00000533509.1_1_11:128855854-128936700:-|nuORF', 'ENSG00000031081|ENST00000264245|ARHGAP31', 'nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-10|ARHGAP33'] 19654 9213 ELRDKYLEEKE True NCI_RA007_Epitope_Rep2 1450.73037359782 1450.7292699358602 40.447 2 -1.6768285744983547 0.43434219068299346 1.0 ['ENSG00000198286|ENST00000396946|CARD11'] 56209 9302 LCCLADTSC True PC9_epitope_Rep1 927.3500106733101 927.3494649679301 40.634 1 -1.6769082391631298 0.43434219068299346 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 3547 22306 AGLSSRNEDR True NCI_RA007_Epitope_Rep2 1103.53194857479 1103.5313749679299 92.651 1 -1.676972646675298 0.4343485219882923 1.0 ['ENST00000593587.5_1_19:41771040-41778038:+|nuORF', 'ENST00000263367.7_2_19:41771210-41778038:+|nuORF'] 91301 8948 RGQPACGL True H1975_Epitope_Rep1 800.39630704912 800.39520993586 39.322 2 -1.67712462257017 0.43439476187811293 1.0 ['ENST00000380094.9_1_10:5931461-5931704:-|nuORF'] 66516 8984 LSHLRHLG True NCI_RA007_Epitope_Rep4 931.5351834804301 931.53408993586 41.392 2 -1.6771322473456556 0.43439476187811293 1.0 ['ENST00000533407.6_1_11:6422737-6440257:-|nuORF'] 46304 12927 ISQFRNDFRQY True H1975_Epitope_Rep1 1472.71606094636 1472.7149699358602 54.798 2 -1.6772986204141171 0.4343962304274346 1.0 ['ENST00000566049.5_1_16:19078961-19089477:+|nuORF'] 130687 6589 VSTRSSTPL True PC9_epitope_Rep4 946.5083595959 946.50726993586 32.503 2 -1.6773216892666678 0.4343962304274346 1.0 ['ENST00000564587.5_1_15:75628430-75630983:+|nuORF'] 125903 17116 VLAWGVWR True NCI_RA007_Epitope_Rep5 985.5497709154099 985.54866993586 72.609 2 -1.677533287592612 0.4344312751122005 1.0 ['ENSG00000155189|ENST00000285518|AGPAT5', 'ENST00000518327.1_1_8:6566222-6612655:+|nuORF'] 5529 21368 AMDSPPAQAV True PC9_epitope_Rep2 985.4538814948899 985.45278993586 87.661 2 -1.6775686581205504 0.4344312751122005 1.0 ['ENST00000508802.5_1_4:37892746-37892950:+|nuORF'] 37052 18131 GVPGTTVRV True PC9_epitope_Rep3 884.50796567308 884.50686993586 74.941 2 -1.677657468655166 0.4344356779139388 1.0 ['ENST00000376398.6_1_20:26054468-26063613:+|nuORF', 'nc|ENSG00000125804|Q5T1J6|FAM182A'] 94701 19495 RSCRVFWIHS True NCI_RA007_Epitope_Rep4 1289.64514493557 1289.64349490379 84.251 3 -1.6778134601663204 0.4344356779139388 1.0 ['ENST00000379649.5_1_13:38924005-38924193:+|nuORF', 'ENST00000494372.1_1_13:38924005-38928496:+|nuORF'] 83230 18301 PSVREMLW True PC9_epitope_Rep4 1016.5113368013599 1016.51022993586 78.463 2 -1.6778225294289812 0.4344356779139388 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 14095 10992 DRWGSRYVD True NCI_RA007_Epitope_Rep5 1152.5312202988 1152.52957490379 48.916 3 -1.6778257058413983 0.4344356779139388 1.0 ['nc|ENSG00000140876|P0C024-3|NUDT7'] 93823 17197 RRASRHIVR True NCI_RA007_Epitope_Rep4 1149.69554071565 1149.6938849037901 74.462 3 -1.6780262125550198 0.4344356779139388 1.0 ['ENST00000263663.9_1_2:9994458-10008411:+|nuORF'] 23177 22005 EVLGVRSGL True PC9_epitope_Rep4 928.5341804209199 928.53308993586 92.863 2 -1.678150046603376 0.4344356779139388 1.0 ['ENST00000450269.5_1_1:45279484-45279676:+|nuORF'] 109039 24983 TAIKSIEFARK True NCI_RA007_Epitope_Rep5 1262.7346711326197 1262.73356993586 103.6 2 -1.6781802117167275 0.4344595275132334 1.0 ['nc|ENSG00000117222|Q15291-2|RBBP5', 'ENSG00000117222|ENST00000264515|RBBP5'] 91397 17070 RHHRRLLT True NCI_RA007_Epitope_Rep5 1087.6475278940698 1087.6464299358602 72.427 2 -1.6782985933427952 0.4344595275132334 1.0 ['ENSG00000186526|ENST00000612078|CYP4F8'] 68663 14305 LTITPDRENV True PC9_epitope_Rep1 1156.60880191316 1156.6077099358602 59.849 2 -1.678496783090019 0.4344833760449423 1.0 ['GRID2|p.H878Ifs*4|1|0.29|ENSG00000152208|chr4:93772105-93772105|C/-|frameshift_variant', 'nc|ENSG00000152208|O43424-2|GRID2', 'ENSG00000152208|ENST00000282020|GRID2', 'GRID2|p.W855*|1|0.21|ENSG00000152208|chr4:93769413-93769413|G/-|frameshift_variant'] 19255 19399 ELKELLTRELP True PC9_epitope_Rep1 1339.77111621099 1339.7700099358601 79.429 2 -1.6785000071046237 0.4344833760449423 1.0 ['ENST00000468373.1_1_1:153516388-153518231:-|nuORF', 'ENSG00000196154|ENST00000368716|S100A4'] 25347 24559 FDYLKGFLE True PC9_epitope_Rep2 1130.5648118428599 1130.56370993586 100.09 2 -1.678614466908329 0.43448970456580127 1.0 ['COL6A6|p.D2019Rfs*12|1|0.45|ENSG00000206384|chr3:130661854-130661855|-/C|frameshift_variant', 'ENSG00000206384|ENST00000358511|COL6A6', 'COL6A6|p.D1304Vfs*12|1|0.12|ENSG00000206384|chr3:130582008-130582009|-/TAGATCTCAAACTTGGGAGAAT|frameshift_variant', 'COL6A6|p.D1304Lfs*23|1|0.12|ENSG00000206384|chr3:130582007-130582008|-/CT|frameshift_variant', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6', 'COL6A6|p.F458Vfs*15|1|0.19|ENSG00000206384|chr3:130566788-130566789|-/C|frameshift_variant', 'COL6A6|p.R581Vfs*21|1|0.05|ENSG00000206384|chr3:130567158-130567159|-/TGTTG|frameshift_variant'] 120855 17812 VELSSLLVR True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 81.146 2 -1.678733563855046 0.4345184140732534 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3'] 124700 4536 VGYSGNGR True PC9_epitope_Rep3 808.38276515996 808.38166993586 22.542 2 -1.679006945019654 0.4345500525927086 1.0 ['ENST00000546516.5_1_16:705169-713132:+|nuORF', 'WDR90|p.S1458Vfs*13|1|0.09|ENSG00000161996|chr16:665739-665739|A/-|frameshift_variant', 'ENSG00000161996|ENST00000293879|WDR90', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'WDR90|p.R1329Lfs*9|1|0.39|ENSG00000161996|chr16:662009-662019|CGCGTGCCGGC/-|frameshift_variant', 'ENST00000547407.5_1_16:706280-710806:+|nuORF'] 16254 11189 EEEWRQRRR True NCI_RA007_Epitope_Rep2 1343.6806784971498 1343.6795899358601 48.105 2 -1.6790097808642426 0.4345500525927086 1.0 ['ENST00000555166.5_2_14:57857320-57866549:+|nuORF', 'ENST00000554703.1_1_14:57857320-57876115:+|nuORF'] 17061 4581 EGGPWGNWK True PC9_epitope_Rep3 1029.46682913709 1029.46572993586 22.714 2 -1.6790378836442008 0.4345500525927086 1.0 ['ENST00000275732.5_1_7:100278784-100278913:-|nuORF'] 48629 25564 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 106.38 3 -1.6790497458403681 0.4345500525927086 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 139385 13052 YLMWRNWQHKN True H1975_Epitope_Rep3 1574.7564862897 1574.7553899358602 55.444 2 -1.6790845002992878 0.4345500525927086 1.0 ['nc|ENSG00000147852|P98155-2|VLDLR', 'ENSG00000147852|ENST00000382100|VLDLR'] 125495 11162 VIYRKVSWS True NCI_RA007_Epitope_Rep3 1136.6342288153598 1136.63257490379 51.012 3 -1.6791752585461592 0.43455637987176476 1.0 ['ENST00000571855.1_1_17:48740997-48741507:+|nuORF'] 16691 5553 EERPQLSDDER True H1975_Epitope_Rep1 1372.6218857779998 1372.62078993586 26.425 2 -1.6793500800391876 0.4345753608593488 1.0 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 105880 8428 SSPMSGGGP True PC9_epitope_Rep2 775.3170536689099 775.3165049679301 37.788 1 -1.6794331485136547 0.4345753608593488 1.0 ['ENSG00000080503|ENST00000349721|SMARCA2', 'nc|ENSG00000080503|P51531-2|SMARCA2'] 30458 24897 GAFQPKVS True PC9_epitope_Rep1 832.4443027873599 832.4437549679301 100.68 1 -1.6794573169431244 0.4345753608593488 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 28590 5403 FSGLVNGR True PC9_epitope_Rep5 848.45045079696 848.44934993586 25.795 2 -1.6794667358989714 0.4345768249563622 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.R1054Pfs*53|1|0.12|ENSG00000138829|chr5:128345413-128345413|C/-|frameshift_variant', 'FBN2|p.D1008Mfs*99|1|0.14|ENSG00000138829|chr5:128345552-128345552|C/-|frameshift_variant'] 36857 8715 GVLKLTAL True NCI_RA007_Epitope_Rep3 813.53238951577 813.53128993586 41.366 2 -1.679573000952565 0.4345768249563622 1.0 ['PPARA|p.M400Nfs*105|1|0.2|ENSG00000186951|chr22:46235165-46235166|-/A|frameshift_variant'] 97166 7202 SDTAPLFQ True NCI_RA007_Epitope_Rep1 877.4181476091701 877.4175949679301 32.004 1 -1.679760932346286 0.4346006668606082 1.0 ['nc|ENSG00000116406|Q9BZQ6-2|EDEM3', 'ENSG00000116406|ENST00000318130|EDEM3'] 63840 16157 LNKQANGLI True PC9_epitope_Rep4 969.5607295219299 969.56018496793 70.089 1 -1.6797818614788869 0.4346006668606082 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66', 'nc|ENSG00000166436|O15016-2|TRIM66', 'ENST00000531498.5_1_11:8665946-8673385:-|nuORF', 'nc|ENSG00000166436|O15016-3|TRIM66', 'ENST00000481014.6_1_11:8646046-8673385:-|nuORF'] 81063 12262 PIREKEVT True PC9_epitope_Rep5 970.5447451046199 970.54364993586 52.154 2 -1.6799221383871834 0.43464055944055946 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 5104 16685 ALLHFLKEQR True PC9_epitope_Rep3 1253.72444080209 1253.72278490379 69.314 3 -1.6800265876147553 0.43465953590368994 1.0 ['nc|ENSG00000166947|P16452-2|EPB42', 'ENSG00000166947|ENST00000441366|EPB42', 'nc|ENSG00000166947|P16452-3|EPB42', 'EPB42|p.Q234Rfs*9|1|0.16|ENSG00000166947|chr15:43209406-43209406|G/-|frameshift_variant'] 74443 4818 NEVDLLGPNQ True NCI_RA007_Epitope_Rep2 1097.53530261973 1097.5342099358602 23.366 2 -1.6800273187891803 0.43465953590368994 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 131399 8102 VTHLLGYPTQN True PC9_epitope_Rep1 1241.6404363946099 1241.63878490379 35.99 3 -1.6801117354225221 0.43465953590368994 1.0 ['nc|ENSG00000188004|P0DPA3|SNHG28', 'ENSG00000243284|ENST00000368100|VSIG8'] 39514 4388 HLETIWRFQEL True NCI_RA007_Epitope_Rep2 1470.76194850962 1470.76084993586 21.704 2 -1.680159200685279 0.4346770494187673 1.0 ['COQ10B|p.S168Qfs*31|1|0.2|ENSG00000115520|chr2:197470124-197470145|AGCCCAGGTCTTCCTGGCTACC/-|frameshift_variant'] 105342 7803 SRPSRPRW True H1975_Epitope_Rep3 1040.5627952106 1040.5616899358602 34.997 2 -1.6802101694212848 0.43469602380792555 1.0 ['ENST00000394232.5_1_15:91769629-91769731:+|nuORF'] 35421 13943 GSDWPHRL True PC9_epitope_Rep4 966.46716349026 966.46606993586 61.536 2 -1.6802197629786533 0.43469602380792555 1.0 ['ENST00000478979.5_1_16:774909-776367:-|nuORF', 'nc|ENSG00000162004|A2IDD5-6|CCDC78', 'nc|ENSG00000162004|A2IDD5-3|CCDC78', 'nc|ENSG00000162004|A2IDD5-5|CCDC78', 'ENST00000482878.5_1_16:774909-776367:-|nuORF'] 18568 21531 EKPFALFL True PC9_epitope_Rep6 963.5429541994698 963.5424049679301 95.691 1 -1.680286191827869 0.43469602380792555 1.0 ['ENSG00000176058|ENST00000409012|TPRN', 'nc|ENSG00000176058|Q4KMQ1-2|TPRN', 'nc|ENSG00000176058|Q4KMQ1-4|TPRN', 'nc|ENSG00000176058|Q4KMQ1-3|TPRN', 'ENST00000477345.1_1_9:140086566-140087185:-|nuORF'] 73153 17984 MRSEEEEAEEA True NCI_RA007_Epitope_Rep5 1308.5139751218 1308.5123249037902 75.962 3 -1.680386377170378 0.43469748500850264 1.0 ['ENSG00000157856|ENST00000288710|DRC1'] 72614 20366 MLVQPGMN True PC9_epitope_Rep6 888.41974491564 888.41864993586 91.035 2 -1.6803940770734715 0.43469748500850264 1.0 ['ENSG00000108349|ENST00000264645|CASC3'] 48516 8603 KAISEELVH True NCI_RA007_Epitope_Rep4 1024.55530978832 1024.5542099358602 39.874 2 -1.6805965279841015 0.4347291053709069 1.0 ['TPM1|p.D275V|1|0.26|ENSG00000140416|chr15:63071141-63071141|A/T|missense_variant'] 132248 9821 VTVPPIAP True NCI_RA007_Epitope_Rep5 792.47454028648 792.47344993586 44.422 2 -1.6806329220678948 0.4347291053709069 1.0 ['nc|ENSG00000142197|Q9Y3R5-2|DOP1B', 'ENSG00000142197|ENST00000691173|DOP1B'] 85101 18734 QELCVCERL True PC9_epitope_Rep6 1091.51035082519 1091.50924993586 84.701 2 -1.6806976063494168 0.4347291053709069 1.0 ['ENST00000547616.2_1_14:19475147-19475555:-|nuORF', 'ENST00000438441.1_22:16365437-16366175:+|nuORF'] 61477 25880 LKAKKPQKRKP True PC9_epitope_Rep4 1320.8717737421198 1320.8701349037901 109.24 3 -1.680742774997942 0.4347291053709069 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 76351 5026 NPWMTEYMRCY True H1975_Epitope_Rep1 1492.59376317932 1492.5926699358602 24.403 2 -1.6807431696569632 0.4347291053709069 1.0 ['nc|ENSG00000154429|Q6IQ19-2|CCSAP', 'ENST00000483092.1_1_1:229460984-229462796:-|nuORF', 'ENSG00000154429|ENST00000284617|CCSAP'] 22604 7904 ETLNKHRADNR True H1975_Epitope_Rep1 1352.69090882768 1352.68980993586 35.354 2 -1.6808248558116827 0.4347466159525674 1.0 ['nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-5|TNPO3'] 29629 25695 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 108.18 3 -1.6808446571555666 0.43474807589046 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 92319 11236 RLLWMMMTVRY True NCI_RA007_Epitope_Rep2 1498.76110328794 1498.7600099358601 48.291 2 -1.680861036335437 0.43474807589046 1.0 ['ENST00000204566.6_1_15:65273230-65275885:-|nuORF'] 93219 19127 RPQRLRKRTE True NCI_RA007_Epitope_Rep3 1338.7956486797395 1338.79454993586 83.539 2 -1.6809249142627294 0.4347543991140246 1.0 ['ENSG00000104980|ENST00000270538|TIMM44'] 65077 20214 LQLKEKKREKT True NCI_RA007_Epitope_Rep5 1399.8510978671898 1399.85000993586 84.694 2 -1.6809967555991912 0.43476072219612055 1.0 ['nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 91387 4725 RHFLTIGWGGF True NCI_RA007_Epitope_Rep2 1289.66692592597 1289.66527490379 23.008 3 -1.6811792830286312 0.4347894177526707 1.0 ['ENST00000437398.5_1_22:24810970-24811030:+|nuORF'] 29576 25615 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 105.16 3 -1.6813271910686627 0.43480692648440644 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 127198 20380 VLVPRSRREP True NCI_RA007_Epitope_Rep4 1207.7149387475497 1207.71384993586 88.242 2 -1.6816842676797574 0.43485799299752786 1.0 ['ENST00000436163.2_X:117250469-117250592:-|nuORF'] 82789 5528 PRPTQFSCV True H1975_Epitope_Rep2 1033.5015003936498 1033.50040993586 26.271 2 -1.6817581581228374 0.43486431463791136 1.0 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 119044 8587 VAGDEQEDS True H1975_Epitope_Rep2 948.36723423512 948.36668496793 37.983 1 -1.681832830970105 0.43487014294342663 1.0 ['ENSG00000046889|ENST00000288368|PREX2'] 23581 11413 EVYNITDRCL True H1975_Epitope_Rep3 1224.58087291316 1224.5797699358602 49.017 2 -1.681925871225984 0.43487014294342663 1.0 ['ENST00000298281.8_1_11:82892100-82892172:+|nuORF'] 108026 11994 SWYKPWTKTL True NCI_RA007_Epitope_Rep5 1308.6866583110398 1308.68500490379 52.797 3 -1.6820854550385427 0.43487014294342663 1.0 ['ENSG00000111058|ENST00000548058|ACSS3', 'ACSS3|p.V232*|1|0.15|ENSG00000111058|chr12:81139177-81139177|G/-|frameshift_variant'] 27223 11919 FLNWFDERAWY True NCI_RA007_Epitope_Rep4 1545.70409928033 1545.70300993586 52.848 2 -1.6821797055016725 0.43487014294342663 1.0 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 10691 6666 CRAVAGVI True NCI_RA007_Epitope_Rep4 787.4374435851099 787.43634993586 32.263 2 -1.6822385692930564 0.43487014294342663 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.Q4208Hfs*9|1|0.07|ENSG00000127603|chr1:39361515-39361515|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 104480 19587 SQLRVRDSLR True H1975_Epitope_Rep3 1228.7000169594 1228.69890993586 82.069 2 -1.682256025673256 0.43487014294342663 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 124929 22762 VHSEMFVG True NCI_RA007_Epitope_Rep5 904.4112884069199 904.41018993586 94.758 2 -1.6822860987111656 0.43487014294342663 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 136358 26889 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 112.09 2 -1.6823112794573452 0.43487014294342663 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 141192 8075 YSVVLGSP True NCI_RA007_Epitope_Rep1 820.4330693973199 820.43196993586 35.408 2 -1.6823182703591693 0.43487646381155837 1.0 ['ENST00000377735.7_1_19:46286802-46287057:-|nuORF'] 139711 13567 YNLYIVENPHY True PC9_epitope_Rep5 1423.6772158261501 1423.67610993586 57.209 2 -1.6824551722500574 0.43489396921975665 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 32897 13309 GHTHMPSV True NCI_RA007_Epitope_Rep4 864.39122166868 864.39012993586 58.339 2 -1.6825133945205728 0.4349002896800098 1.0 ['ARMC9-PSMD1|2|fusion', 'ARMC9-PSMD1|1|fusion', 'ENSG00000173692|ENST00000308696|PSMD1', 'nc|ENSG00000173692|Q99460-2|PSMD1'] 121242 20066 VETDQRKM True PC9_epitope_Rep2 1005.4913296327699 1005.49022993586 82.589 2 -1.6825988818761641 0.4349017458701949 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 104471 22593 SQLQRPPEA True PC9_epitope_Rep2 1024.5301576696397 1024.5290699358602 92.404 2 -1.682647490310598 0.4349017458701949 1.0 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 24517 18877 FAFKISPK True PC9_epitope_Rep6 936.5432885526399 936.54218993586 85.259 2 -1.6826757411837074 0.4349032019952356 1.0 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 61548 19845 LKGWHKRFFV True NCI_RA007_Epitope_Rep5 1316.7505959802797 1316.74948993586 83.244 2 -1.682678432216241 0.4349032019952356 1.0 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'OSBPL6|p.K117Sfs*18|1|0.18|ENSG00000079156|chr2:178331581-178331581|A/-|frameshift_variant'] 33696 7008 GLGVWEARGYG True H1975_Epitope_Rep1 1163.5723568347898 1163.5712499358601 31.991 2 -1.6827379443410675 0.4349095219987921 1.0 ['nc|ENSG00000178026|Q2VPJ9-2|LRRC75B'] 82696 14340 PQTFLNIN True PC9_epitope_Rep4 945.4919812557699 945.49088993586 63.061 2 -1.6828783670726866 0.4349459840300611 1.0 ['ENST00000328747.11_1_7:64864784-64864859:+|nuORF'] 126430 14430 VLKLPVRSL True PC9_epitope_Rep1 1023.68045073179 1023.6793499358599 60.328 2 -1.6828929453119987 0.4349459840300611 1.0 ['ENSG00000132313|ENST00000337109|MRPL35', 'ENST00000404272.2_1_6:13949414-13949672:+|nuORF', 'nc|ENSG00000132313|Q9NZE8-2|MRPL35'] 95451 13235 RWLEKEERFLK True NCI_RA007_Epitope_Rep1 1532.8463468399198 1532.84524993586 55.48 2 -1.682942835991593 0.4349459840300611 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 126369 10614 VLKCNTPD True NCI_RA007_Epitope_Rep3 888.43750315476 888.43640993586 48.8 2 -1.6829612175505082 0.4349459840300611 1.0 ['ENSG00000100385|ENST00000216223|IL2RB'] 14379 4151 DTDAPDLDIE True PC9_epitope_Rep4 1102.46661392322 1102.4655099358602 22.296 2 -1.6831341972513336 0.43495375806577874 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.K2920Rfs*27|1|0.13|ENSG00000124942|chr11:62525660-62525660|G/-|frameshift_variant', 'AHNAK|p.K2694Qfs*8|1|0.04|ENSG00000124942|chr11:62526337-62526338|-/TG|frameshift_variant'] 19055 6628 ELFNIKNAY True NCI_RA007_Epitope_Rep1 1110.57095985246 1110.5698699358602 29.795 2 -1.683262242347321 0.43495375806577874 1.0 ['MYH1|p.K1487N|1|0.11|ENSG00000109061|chr17:10497357-10497357|C/G|missense_variant'] 71404 6018 LYSQYEEKLQE True H1975_Epitope_Rep1 1428.6772753958 1428.6756149037901 28.22 3 -1.6833638183619277 0.43495375806577874 1.0 ['nc|ENSG00000263155|P0CAP1-2|MYZAP', 'nc|ENSG00000263155|P0CAP1-8|MYZAP', 'nc|ENSG00000263155|P0CAP1-5|MYZAP', 'nc|ENSG00000263155|P0CAP1-10|MYZAP', 'nc|ENSG00000263155|P0CAP1-7|MYZAP', 'nc|ENSG00000263155|P0CAP1-6|MYZAP', 'nc|ENSG00000263155|P0CAP1-9|MYZAP', 'nc|ENSG00000263155|P0CAP1-3|MYZAP', 'nc|ENSG00000263155|P0CAP1-4|MYZAP', 'ENSG00000263155|ENST00000267853|MYZAP', 'nc|ENSG00000263155|P0CAP1-11|MYZAP'] 20336 5961 ENVQRNLKH True PC9_epitope_Rep6 1136.6050539454 1136.60341490379 31.233 3 -1.6833842112117006 0.434960076938561 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 64178 13572 LPGASHMTR True H1975_Epitope_Rep1 968.4861846826801 968.4856349679301 57.331 1 -1.6837558105269415 0.4350509930220075 1.0 ['ENST00000458686.5_1_2:70283008-70310715:-|nuORF'] 43150 18348 IFDRELHRQTG True PC9_epitope_Rep6 1370.7054962626598 1370.70438993586 83.218 2 -1.6838115404764213 0.4350509930220075 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 76013 10155 NLWWEKRQHYR True NCI_RA007_Epitope_Rep2 1614.81677804714 1614.81568993586 44.089 2 -1.6841199884462075 0.43506166765439275 1.0 ['ENST00000411999.1_1_2:197893450-197893558:-|nuORF'] 136366 26808 WTHGAQGG True H1975_Epitope_Rep3 812.3565504121198 812.35544993586 112.06 2 -1.6841308404924296 0.43506166765439275 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 111737 24326 TIHFWHVW True PC9_epitope_Rep3 1124.5555845718397 1124.5544899358601 98.881 2 -1.6841417692273335 0.43506166765439275 1.0 ['ENST00000261700.7_1_14:52471272-52471401:+|nuORF'] 94088 23129 RRLKKKKTTIK True PC9_epitope_Rep6 1398.9510866919798 1398.94998993586 102.07 2 -1.6841603859453131 0.43506166765439275 1.0 ['SYT6|p.K488Sfs*12|1|0.38|ENSG00000134207|chr1:114097781-114097781|C/-|frameshift_variant', 'ENSG00000134207|ENST00000610222|SYT6', 'nc|ENSG00000134207|Q5T7P8-2|SYT6'] 59373 2911 LFLFTYRDCL True H1975_Epitope_Rep3 1289.6478302741698 1289.64619490379 15.457 3 -1.6841701217921183 0.43506166765439275 1.0 ['ENSG00000146221|ENST00000371505|TCTE1'] 113721 18733 TLYTLLHFPLQ True PC9_epitope_Rep6 1344.74417318716 1344.7430699358601 84.697 2 -1.6842526672118894 0.43506166765439275 1.0 ['ENST00000398922.6_1_11:62433120-62433833:+|nuORF', 'ENST00000529868.1_1_11:62433120-62433501:+|nuORF'] 73276 12086 MSQLYFFLVF True PC9_epitope_Rep4 1293.64676764501 1293.64513490379 54.293 3 -1.6842571848000514 0.43506166765439275 1.0 ['ENSG00000196119|ENST00000284287|OR8A1', 'nc|ENSG00000196119|Q8NGG7|OR8A1'] 99087 19925 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 83.555 2 -1.6843942432317411 0.435079166293944 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 53925 23639 KTPRELKKDPK True PC9_epitope_Rep1 1338.7983340183398 1338.79722993586 95.717 2 -1.6845666290995849 0.4350878762130495 1.0 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 30790 9501 GAMSHRGG True H1975_Epitope_Rep2 771.3446058294298 771.3440549679301 41.515 1 -1.6846403486604364 0.4350878762130495 1.0 ['ENST00000291672.5_1_21:47602757-47602988:-|nuORF'] 68369 7967 LTEQLRSLIP True H1975_Epitope_Rep1 1168.6815729306 1168.6804699358602 35.594 2 -1.68468197876253 0.4350878762130495 1.0 ['ENSG00000185158|ENST00000543378|LRRC37B', 'nc|ENSG00000185158|Q96QE4-2|LRRC37B', 'nc|ENSG00000185158|Q96QE4|LRRC37B', 'ENST00000579766.1_1_17:30376071-30377294:+|nuORF', 'ENST00000417404.2_1_17:28960066-28961284:+|nuORF', 'RHOT1-LRRC37B|1|fusion', 'ENST00000579094.1_1_17:30374694-30380344:+|nuORF'] 57518 4036 LEDNKWAFNCD True H1975_Epitope_Rep3 1353.5659511250099 1353.56431490379 20.655 3 -1.6847239196613641 0.4350878762130495 1.0 ['SLITRK6|p.C222F|1|0.41|ENSG00000184564|chr13:85795844-85795844|C/A|missense_variant'] 61624 25067 LKNEHFAI True NCI_RA007_Epitope_Rep5 970.5236157372199 970.52250993586 103.92 2 -1.6847381930571497 0.4350878762130495 1.0 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENSG00000134444|ENST00000644646|RELCH', 'nc|ENSG00000134444|Q9P260-2|RELCH'] 86491 28310 QKVVEMKWDQ True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 117.93 3 -1.6847816687692643 0.4350878762130495 1.0 ['DNER|p.R666Afs*48|1|0.09|ENSG00000187957|chr2:229366979-229366979|G/-|frameshift_variant', 'ENSG00000187957|ENST00000341772|DNER'] 23694 11032 EYDQPWEWNRV True NCI_RA007_Epitope_Rep1 1520.6684420476 1520.66734993586 46.908 2 -1.6848006841540135 0.4350878762130495 1.0 ['ENSG00000107338|ENST00000377707|SHB'] 37789 15253 GYDGWQIL True PC9_epitope_Rep1 950.4497820906199 950.44868993586 63.49 2 -1.6848783621869874 0.4350878762130495 1.0 ['nc|ENSG00000166947|P16452-2|EPB42', 'ENSG00000166947|ENST00000441366|EPB42', 'ENST00000567019.1_1_15:43489502-43501706:-|nuORF'] 120572 17234 VEGPSKVDI True NCI_RA007_Epitope_Rep1 942.5022115863 942.50110993586 71.167 2 -1.6849636013889389 0.4350878762130495 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF'] 19500 22760 ELPFLTHVN True PC9_epitope_Rep2 1068.5603951687601 1068.55928993586 93.039 2 -1.6850968385648823 0.4350878762130495 1.0 ['ENSG00000178971|ENST00000651323|CTC1'] 60194 23627 LGPKSKVSRHL True PC9_epitope_Rep1 1220.7353398389598 1220.7342499358601 95.674 2 -1.6851379984220358 0.4350878762130495 1.0 ['ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 45907 10437 ISEAEQRTI True PC9_epitope_Rep3 1045.5403880001702 1045.53928993586 45.083 2 -1.685172719147328 0.4350878762130495 1.0 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.G345Efs*28|1|0.53|ENSG00000077420|chr10:26536206-26536206|G/-|frameshift_variant', 'nc|ENSG00000077420|Q7Z5R6-2|APBB1IP'] 139226 21920 YLFWYRQT True PC9_epitope_Rep2 1175.5763795860698 1175.5752899358602 89.792 2 -1.6852513130091642 0.4351053720163229 1.0 ['nc|ENSG00000276953|A0A0B4J2E0|TRBV12-4'] 28615 7382 FSHSLVNI True NCI_RA007_Epitope_Rep3 915.48141657207 915.48030993586 36.164 2 -1.6853043290768204 0.4351116874986025 1.0 ['ENST00000463367.1_1_2:99137735-99137873:+|nuORF'] 80719 24996 PHALLVYP True PC9_epitope_Rep3 908.51198842436 908.51088993586 101.49 2 -1.685416015718213 0.43512431803953133 1.0 ['ENSG00000090581|ENST00000204679|GNPTG'] 44702 19289 ILTTSLRDL True PC9_epitope_Rep4 1030.60225998074 1030.60116993586 82.301 2 -1.685422268710919 0.43512431803953133 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 83185 16883 PSTAEPSKFP True H1975_Epitope_Rep2 1059.52367530687 1059.52317496793 70.186 1 -1.685471261959154 0.4351257685858021 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.R1075*|1|0.13|ENSG00000172493|chr4:87132334-87132341|GTATTCTC/-|frameshift_variant'] 63704 24292 LMYEDSQR True H1975_Epitope_Rep3 1040.45969515132 1040.4585899358601 101.17 2 -1.6854947217429888 0.4351257685858021 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 86685 13964 QLIEKITQV True PC9_epitope_Rep6 1070.63356010902 1070.6324699358602 65.567 2 -1.6855389289003344 0.43512721906720925 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1', 'ENST00000472131.5_1_1:15653545-15656069:+|nuORF', 'ENST00000459961.1_1_1:15653545-15655159:+|nuORF'] 31364 9696 GDRGGFGP True PC9_epitope_Rep1 761.3456513752499 761.3451049679301 42.152 1 -1.685625992193154 0.43512721906720925 1.0 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000483853.1_1_16:31202042-31202756:+|nuORF', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 93954 12148 RRHQRKYRRYS True NCI_RA007_Epitope_Rep1 1604.8872576487997 1604.8861699358602 51.227 2 -1.6857179124628896 0.43514471286597434 1.0 ['nc|ENSG00000117616|Q9BUV0-3|RSRP1', 'nc|ENSG00000117616|Q9BUV0-2|RSRP1', 'ENSG00000117616|ENST00000243189|RSRP1'] 129149 13775 VQRKKCRI True H1975_Epitope_Rep3 1029.6229529390098 1029.6218499358602 58.288 2 -1.6857568438747668 0.4351622062736155 1.0 ['ENSG00000262655|ENST00000576479|SPON1'] 126357 7453 VLITGFVWY True PC9_epitope_Rep5 1096.59571804832 1096.5946299358602 33.622 2 -1.6859269710778793 0.43517628384269713 1.0 ['ENSG00000251154|ENST00000509356|PTTG1IP2'] 65647 17700 LSALGGCP True NCI_RA007_Epitope_Rep4 716.3527109016401 716.3521649679301 76.59 1 -1.685953697975602 0.43517628384269713 1.0 ['nc|ENSG00000023171|Q3KR37-3|GRAMD1B'] 123427 17755 VGNGKGAA True PC9_epitope_Rep6 672.3554877829599 672.35493496793 80.928 1 -1.685958625206383 0.43517628384269713 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 29743 20838 FVNDPENEI True PC9_epitope_Rep6 1075.48220441771 1075.48110993586 92.927 2 -1.6859656411538593 0.43517628384269713 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'ENSG00000163092|ENST00000409195|XIRP2'] 37298 18650 GVRYQIQP True PC9_epitope_Rep6 959.5188647099499 959.5183149679301 84.381 1 -1.686111841649131 0.43520495422484046 1.0 ['ENST00000593256.6_2_19:11456822-11456954:-|nuORF'] 141578 21125 YTPQVIHCRYV True H1975_Epitope_Rep3 1377.68634104121 1377.6852499358602 88.237 2 -1.6861609122006955 0.4352064027900426 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 32521 14781 GGGAESGK True NCI_RA007_Epitope_Rep4 661.3031178569299 661.30256496793 64.317 1 -1.6862386326572036 0.4352064027900426 1.0 ['nc|ENSG00000233101|C0HLZ6|HOXB-AS3'] 34256 17995 GNRLRAELGR True NCI_RA007_Epitope_Rep3 1140.64758746372 1140.64648993586 78.85 2 -1.686252633383596 0.4352078512904776 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 10380 21690 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 94.042 2 -1.6862588642115195 0.4352078512904776 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 66962 14758 LSPDLSHTTL True PC9_epitope_Rep5 1082.56078909158 1082.5596899358602 61.766 2 -1.686325629544619 0.43522534203702046 1.0 ['ENSG00000198734|ENST00000367797|F5'] 22695 7542 ETRESSCV True H1975_Epitope_Rep2 909.3861958578899 909.38508993586 33.961 2 -1.6865187653078662 0.4352520397898737 1.0 ['nc|ENSG00000007402|Q9NY47-4|CACNA2D2', 'ENSG00000007402|ENST00000424201|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-3|CACNA2D2', 'nc|ENSG00000007402|Q9NY47|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-5|CACNA2D2', 'chr3:50364976-50365075|435|26.02|0.52|5.63|-|ENST00000423994|CACNA2D2,CACNA2D2', 'ENST00000483620.1_1_3:50402422-50403202:-|nuORF'] 59603 17159 LFVVRQEQ True PC9_epitope_Rep1 1017.5607295219297 1017.55962993586 70.823 2 -1.6867447615152837 0.4352520397898737 1.0 ['SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2'] 141084 7884 YSPSEAALKN True H1975_Epitope_Rep1 1078.5294889632999 1078.52838993586 35.278 2 -1.6867730094388127 0.4352520397898737 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20'] 128833 7841 VQDAIADAEQR True H1975_Epitope_Rep1 1214.5891290977397 1214.58802993586 35.111 2 -1.686823426932773 0.4352520397898737 1.0 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 80141 19778 PFREARKR True NCI_RA007_Epitope_Rep4 1058.6097454030198 1058.60864993586 85.477 2 -1.6868535333737529 0.4352520397898737 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2'] 64617 20163 LPSTYRSLV True PC9_epitope_Rep4 1034.5760452328998 1034.57494993586 85.695 2 -1.6869541469471816 0.4352520397898737 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 130565 21007 VSRPHRGA True H1975_Epitope_Rep3 878.4834822607398 878.4823899358599 87.741 2 -1.6872200572269898 0.43531423589766516 1.0 ['ENST00000407780.7_1_21:45648256-45648535:-|nuORF'] 37021 19827 GVPASTCL True PC9_epitope_Rep6 746.36327558534 746.36272496793 88.925 1 -1.687341923328646 0.435345791050114 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3'] 75876 8525 NLQKRESI True PC9_epitope_Rep2 986.5508931142199 986.54978993586 38.155 2 -1.6873919445298253 0.435345791050114 1.0 ['ENSG00000167910|ENST00000301645|CYP7A1'] 122522 11098 VGERALSS True NCI_RA007_Epitope_Rep5 817.4293809992099 817.42828993586 49.325 2 -1.6874041258055172 0.435345791050114 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'nc|ENSG00000204969|Q9Y5H9-2|PCDHA2', 'nc|ENSG00000255408|Q9Y5H8-2|PCDHA3', 'nc|ENSG00000204969|Q9Y5H9-3|PCDHA2', 'PCDHA13|p.R497L|1|0.61|ENSG00000239389|chr5:140883758-140883758|G/T|missense_variant', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'nc|ENSG00000204963|Q9UN72-2|PCDHA7'] 80544 8463 PGPLSKQGS True PC9_epitope_Rep1 869.46068112749 869.45958993586 37.388 2 -1.6874051105240397 0.435345791050114 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 106305 5373 STFQVFQE True NCI_RA007_Epitope_Rep5 984.4552613938798 984.45416993586 27.357 2 -1.6874338642456226 0.435345791050114 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 125135 14584 VIGEKRAVE True PC9_epitope_Rep2 999.5712942056299 999.57018993586 61.366 2 -1.687525309883733 0.4353632777138259 1.0 ['ENST00000477982.2_1_13:77575078-77575330:-|nuORF'] 118201 9703 TYKMCPIPPK True NCI_RA007_Epitope_Rep3 1176.6035229340398 1176.60187490379 45.241 3 -1.687548026716522 0.4353695880551644 1.0 ['ENSG00000172346|ENST00000306149|CSDC2'] 87106 8932 QNRWKRQNFHE True H1975_Epitope_Rep1 1541.7599914470095 1541.75888993586 39.262 2 -1.68789350427929 0.435373921594922 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 10492 18115 CITPKRRLTR True NCI_RA007_Epitope_Rep5 1242.7342942931398 1242.73264490379 76.484 3 -1.6878954110865285 0.435373921594922 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 45213 15151 IPSDTDFRI True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 63.434 2 -1.6880090851645655 0.435373921594922 1.0 ['ENSG00000099219|ENST00000339450|ERMP1', 'ENST00000475005.1_1_9:5812814-5833063:-|nuORF', 'nc|ENSG00000099219|Q7Z2K6-2|ERMP1'] 62644 20929 LLLEQYPTR True PC9_epitope_Rep4 1131.62880908175 1131.6277099358601 88.663 2 -1.6881818596770517 0.435373921594922 1.0 ['ENSG00000138382|ENST00000260953|METTL5', 'ENST00000471560.1_1_2:170680960-170681107:-|nuORF'] 86861 7926 QLQRDALRHFA True NCI_RA007_Epitope_Rep1 1353.72656606041 1353.72546993586 34.823 2 -1.6882033290444936 0.435373921594922 1.0 ['ENSG00000235194|ENST00000452015|PPP1R3E'] 16356 8385 EEIHAFRQLE True NCI_RA007_Epitope_Rep2 1270.6305999868998 1270.6295099358601 37.256 2 -1.6882220026695944 0.435373921594922 1.0 ['nc|ENSG00000293505|Q96P88|GNRHR2'] 84035 9510 PVVGDRLK True PC9_epitope_Rep1 882.5287011176599 882.52760993586 41.435 2 -1.688274804092688 0.4353753659790358 1.0 ['ENSG00000100994|ENST00000216962|PYGB'] 46963 21845 ITPNTYYFL True PC9_epitope_Rep2 1130.56481184286 1130.56370993586 89.501 2 -1.6882994818494927 0.4353753659790358 1.0 ['ENST00000367568.4_1_6:144509016-144509238:+|nuORF'] 37840 8831 GYLLPFPGPG True PC9_epitope_Rep4 1016.5331177917599 1016.53202993586 41.501 2 -1.688661050150513 0.43543754958820835 1.0 ['ENST00000264703.3_1_2:27715053-27715119:-|nuORF'] 100339 6269 SKLREYQQYH True PC9_epitope_Rep6 1350.6680481247802 1350.6669499358602 32.618 2 -1.6886897830261847 0.4354550330770606 1.0 ['ENSG00000198178|ENST00000360345|CLEC4C', 'nc|ENSG00000198178|Q8WTT0-2|CLEC4C'] 65912 13209 LSDPSWRLI True PC9_epitope_Rep1 1085.58694426977 1085.58584993586 55.672 2 -1.688839358039976 0.4354768422816917 1.0 ['ENST00000393085.3_1_7:135613585-135613720:-|nuORF'] 70154 18838 LVPPRLAI True PC9_epitope_Rep5 877.5749230340899 877.57382993586 77.476 2 -1.6888549554939194 0.4354768422816917 1.0 ['ENST00000405832.2_1_6:56297292-56297433:-|nuORF'] 116636 9848 TVAPKHHV True NCI_RA007_Epitope_Rep3 887.4977353425501 887.49662993586 45.81 2 -1.688969183952168 0.4354768422816917 1.0 ['ENSG00000165591|ENST00000374900|FAAH2'] 29917 11799 FVWWDWARWER True NCI_RA007_Epitope_Rep2 1635.7735162528295 1635.7724099358602 50.495 2 -1.6890296087959245 0.4354768422816917 1.0 ['ENSG00000108784|ENST00000225927|NAGLU'] 48625 25080 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 104.33 3 -1.6890629513988307 0.4354768422816917 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 109220 5201 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 24.856 2 -1.6890747282815306 0.4354768422816917 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 126874 13224 VLQGSRII True PC9_epitope_Rep6 884.5443511817999 884.54324993586 62.521 2 -1.6890920044016209 0.4354768422816917 1.0 ['ENSG00000186452|ENST00000398458|TMPRSS12'] 140991 22646 YSHHHHQMV True PC9_epitope_Rep1 1174.5090453855803 1174.50794993586 91.915 2 -1.689114811386905 0.4355054974524001 1.0 ['ENST00000590891.1_1_16:4660442-4660589:-|nuORF'] 92864 18732 RPFFWMFV True NCI_RA007_Epitope_Rep1 1128.5578930709598 1128.55678993586 77.004 2 -1.6891648684628964 0.43551811213658403 1.0 ['ENSG00000142182|ENST00000628202|DNMT3L', 'nc|ENSG00000142182|Q9UJW3-2|DNMT3L'] 36999 14815 GVNPDGSP True NCI_RA007_Epitope_Rep4 741.32933260477 741.32878496793 64.447 1 -1.6892712693233327 0.43551811213658403 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 94158 23729 RRPAQLLPLR True NCI_RA007_Epitope_Rep3 1218.76730867358 1218.7662099358602 102.87 2 -1.689419479303279 0.4355642458100559 1.0 ['ENST00000517870.1_1_1:53099041-53108627:+|nuORF'] 27364 13452 FLSVTRAVSY True H1975_Epitope_Rep3 1141.6131590176099 1141.61206993586 57.016 2 -1.6894513381313174 0.4355642458100559 1.0 ['nc|ENSG00000101180|Q9Y5N1-3|HRH3', 'nc|ENSG00000101180|Q9Y5N1-7|HRH3', 'nc|ENSG00000101180|Q9Y5N1-4|HRH3', 'ENSG00000101180|ENST00000340177|HRH3', 'nc|ENSG00000101180|Q9Y5N1-2|HRH3', 'nc|ENSG00000101180|Q9Y5N1-5|HRH3', 'nc|ENSG00000101180|Q9Y5N1-6|HRH3'] 39422 21844 HKTFFPSRGQ True H1975_Epitope_Rep2 1203.61489035311 1203.61324490379 90.331 3 -1.6895357807733025 0.4356152445224076 1.0 ['ENSG00000124203|ENST00000371030|ZNF831'] 30796 20275 GANHMYPMT True NCI_RA007_Epitope_Rep5 1020.41572216436 1020.41462993586 84.929 2 -1.6896607754833635 0.43563902885936784 1.0 ['ENST00000482108.1_2_7:94295726-94295804:+|nuORF'] 89888 20679 RCCCCACK True NCI_RA007_Epitope_Rep5 888.2896764295599 888.28856993586 86.499 2 -1.6897062387933053 0.43563902885936784 1.0 ['nc|nan|Q9H972-2|C14orf93', 'ENSG00000100802|ENST00000299088|C14orf93'] 56710 22556 LDLCHTTS True NCI_RA007_Epitope_Rep2 888.4011176460401 888.40002993586 93.818 2 -1.689863126907783 0.4356636950644592 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 56048 7409 LASTPQSP True PC9_epitope_Rep1 799.40758292547 799.40648993586 33.312 2 -1.689879569591637 0.4356636950644592 1.0 ['ENST00000392432.6_1_3:194308573-194308774:-|nuORF'] 80518 12145 PGPFAPLLPPQ True PC9_epitope_Rep5 1132.6280808057597 1132.6269899358601 51.706 2 -1.6899813278605573 0.4356636950644592 1.0 ['ENST00000524739.1_1_11:134129171-134129964:+|nuORF', 'ENST00000527082.5_1_11:134129171-134129738:+|nuORF'] 80608 3889 PGQVDFFDPT True H1975_Epitope_Rep3 1121.5029398622898 1121.50184993586 20.08 2 -1.6902076773992674 0.4356636950644592 1.0 ['RRAGC|p.M121V|1|0.22|ENSG00000116954|chr1:38856959-38856959|T/C|missense_variant'] 64841 6183 LQDGVLTPP True NCI_RA007_Epitope_Rep2 938.50729696674 938.50618993586 28.657 2 -1.6903128087394368 0.4356636950644592 1.0 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENSG00000181404|ENST00000696149|WASHC1'] 64660 10529 LPVDGRPLP True NCI_RA007_Epitope_Rep5 962.5549158654999 962.55380993586 47.134 2 -1.6903325764914345 0.4356636950644592 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 12778 14442 DLERELSK True PC9_epitope_Rep3 988.5189242795999 988.51782993586 60.657 2 -1.6903708144434075 0.4356636950644592 1.0 ['nc|ENSG00000105137|Q6ZW31-2|SYDE1', 'ENSG00000105137|ENST00000342784|SYDE1'] 83278 13096 PTASPANK True NCI_RA007_Epitope_Rep5 784.4079172786401 784.40682993586 57.054 2 -1.6905253211938698 0.4356636950644592 1.0 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 83815 22792 PVLLHLPRM True PC9_epitope_Rep4 1074.63720602082 1074.63610993586 95.89 2 -1.690556130527426 0.4356636950644592 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 73952 3664 NCIHPGFT True PC9_epitope_Rep2 887.39597269595 887.39486993586 19.364 2 -1.6905637609789288 0.4356636950644592 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 94031 3827 RRKREKHKHN True NCI_RA007_Epitope_Rep1 1387.8021310425097 1387.80049490379 18.891 3 -1.690616224306073 0.4356636950644592 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.A690Hfs*28|1|0.39|ENSG00000188177|chr2:112325177-112325177|G/-|frameshift_variant'] 16862 4021 EFFFSFMQG True PC9_epitope_Rep5 1138.4793679667398 1138.47826993586 20.546 2 -1.6908250881395153 0.43567630367755483 1.0 ['ENST00000409150.7_2_2:191383468-191383507:-|nuORF'] 101776 16915 SLNYFFRAI True PC9_epitope_Rep5 1129.59202965021 1129.59092993586 70.079 2 -1.6908363764532757 0.43567630367755483 1.0 ['ENSG00000092020|ENST00000261475|PPP2R3C', 'nc|ENSG00000092020|Q969Q6-2|PPP2R3C'] 58940 6955 LETQNRAL True PC9_epitope_Rep1 943.5086939490699 943.50758993586 31.557 2 -1.6909603110526727 0.435693778835305 1.0 ['ENSG00000148798|ENST00000369849|INA'] 11540 11673 DFQQLLAEVP True NCI_RA007_Epitope_Rep1 1158.5920892198599 1158.59098993586 49.379 2 -1.6912445897382942 0.43573359547800444 1.0 ['ENST00000406539.6_1_12:123459581-123460450:+|nuORF'] 10702 22453 CRKLLSLFLA True PC9_epitope_Rep4 1162.6896355165 1162.68799490379 94.596 3 -1.6912855774593265 0.43573989879243513 1.0 ['CFAP54|p.S1893C|1|0.15|ENSG00000188596|chr12:96679713-96679713|A/T|missense_variant'] 139220 21245 YLFKRFIF True PC9_epitope_Rep4 1132.64333694708 1132.64222993586 89.884 2 -1.6913754235389715 0.435749072874313 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 124202 20929 VGTASSPV True PC9_epitope_Rep5 716.3704691407601 716.36992496793 85.56 1 -1.6914404894995865 0.435749072874313 1.0 ['nc|ENSG00000103197|P49815-8|TSC2', 'ENST00000461648.2_1_16:2098014-2103834:+|nuORF'] 4999 5300 ALHSPQYI True NCI_RA007_Epitope_Rep5 927.48141657207 927.48030993586 27.08 2 -1.6914576140090027 0.435749072874313 1.0 ['ENSG00000103194|ENST00000219473|USP10', 'nc|ENSG00000103194|Q14694-2|USP10', 'ENST00000540269.6_1_16:84733615-84778337:+|nuORF'] 132573 15979 VVENIMAG True H1975_Epitope_Rep2 831.4160394341899 831.41494993586 66.663 2 -1.691581777241832 0.435749072874313 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-6|CDH23'] 124586 18673 VGVSVLLA True NCI_RA007_Epitope_Rep2 756.4745402864799 756.47399496793 77.433 1 -1.6917023845405712 0.435749072874313 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM3|p.R715Afs*61|1|0.07|ENSG00000218336|chr4:182688269-182688269|C/-|frameshift_variant'] 69743 13398 LVFEVQQPFLF True PC9_epitope_Rep2 1365.7332741502898 1365.7316249037901 56.817 3 -1.6917967775593836 0.4357777157218654 1.0 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1', 'ENST00000528996.1_1_11:57374185-57382051:+|nuORF', 'nc|ENSG00000149131|P05155-2|SERPING1'] 79093 22848 PALLYLVPF True PC9_epitope_Rep4 1031.60555445603 1031.60497496793 96.107 1 -1.6918725968918025 0.43578401805062217 1.0 ['nc|ENSG00000157837|Q8TCT6-3|SPPL3', 'ENST00000545209.1_1_12:121202804-121206399:-|nuORF', 'ENST00000392495.7_1_12:121202804-121206971:-|nuORF', 'ENSG00000157837|ENST00000353487|SPPL3'] 57683 5644 LEEGIEYEFR True NCI_RA007_Epitope_Rep2 1283.60338217955 1283.60173490379 26.568 3 -1.691911740012602 0.43580779197569475 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 64264 11123 LPHGKTDQDL True NCI_RA007_Epitope_Rep3 1122.56693710118 1122.5658499358601 50.854 2 -1.6919360756013995 0.43580779197569475 1.0 ['ENST00000239165.8_1_17:46685231-46685336:-|nuORF'] 27699 9421 FPLKGRVP True H1975_Epitope_Rep3 912.5545219426799 912.55342993586 41.239 2 -1.6921363919938017 0.43582039539819056 1.0 ['ENST00000467948.1_1_6:31950925-31952132:+|nuORF'] 133146 25684 VVQVIKLA True NCI_RA007_Epitope_Rep1 868.5745886809199 868.57404496793 106.3 1 -1.6921458964571434 0.43582039539819056 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 141787 9960 YVDCYGNLAP True PC9_epitope_Rep5 1113.4800962427298 1113.47898993586 43.286 2 -1.6923184253348196 0.43583786621393705 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3', 'ENST00000508449.1_1_10:61842291-61844452:-|nuORF'] 139188 17026 YLEPSILGL True NCI_RA007_Epitope_Rep3 1003.5589981864299 1003.55790993586 74.831 2 -1.6923696677425177 0.43584416744851 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 48581 25667 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 106.41 3 -1.6925339983771737 0.4358567694953872 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 75881 13265 NLQQRQFLPLQ True H1975_Epitope_Rep3 1383.76228286279 1383.76118993586 56.282 2 -1.6925600533851055 0.4358567694953872 1.0 ['ENST00000555988.1_2_14:75356010-75360059:+|nuORF'] 35036 7768 GQVGEGRGD True PC9_epitope_Rep6 873.3940581196499 873.39296993586 39.245 2 -1.6927200684358934 0.4358582022873481 1.0 ['ENST00000274031.7_1_4:140477471-140477915:-|nuORF'] 6105 5848 APMDVGEEPL True NCI_RA007_Epitope_Rep1 1056.47976188956 1056.4786699358601 26.799 2 -1.6927236726196322 0.4358582022873481 1.0 ['ENSG00000197594|ENST00000647893|ENPP1'] 68277 9026 LTEEARKAY True H1975_Epitope_Rep2 1079.56112344475 1079.56002993586 39.67 2 -1.6928765455144779 0.4358785360896126 1.0 ['ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 70257 18060 LVRKARSHIG True NCI_RA007_Epitope_Rep3 1135.6938093801498 1135.6927099358602 79.136 2 -1.69288763488973 0.4358785360896126 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 75988 6118 NLVPGDPR True NCI_RA007_Epitope_Rep1 866.46101548066 866.45990993586 27.835 2 -1.6929304203513593 0.4358785360896126 1.0 ['ENST00000464676.5_1_3:133669982-133717557:-|nuORF', 'ENSG00000174640|ENST00000310926|SLCO2A1'] 56711 21381 LDLCHTTS True PC9_epitope_Rep3 888.4011176460401 888.40002993586 87.541 2 -1.6930394557448267 0.4358785360896126 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 127229 19846 VLWKKQKDK True PC9_epitope_Rep5 1171.7077281087898 1171.70608490379 81.385 3 -1.693049898460221 0.4358785360896126 1.0 ['nc|ENSG00000116815|P19256-2|CD58', 'nc|ENSG00000116815|P19256-3|CD58', 'ENSG00000116815|ENST00000369489|CD58'] 10282 11267 CCHQLLLI True PC9_epitope_Rep5 941.4826795253699 941.48158993586 48.331 2 -1.693635197047962 0.43601684031849197 1.0 ['ENSG00000177108|ENST00000319374|ZDHHC22'] 82535 13802 PPRRRLCQRRH True PC9_epitope_Rep6 1473.83238562497 1473.83128993586 64.889 2 -1.6936595697497858 0.43601684031849197 1.0 ['ENST00000395824.5_1_17:16472307-16472361:-|nuORF'] 62522 24250 LLIVLIPWKKI True PC9_epitope_Rep4 1334.9053652861796 1334.9042699358602 101.75 2 -1.6937049919052896 0.43601684031849197 1.0 ['ENSG00000188211|ENST00000338965|NCR3LG1'] 73953 3759 NCIHPGFT True PC9_epitope_Rep2 887.39597269595 887.39486993586 19.723 2 -1.6937357894926404 0.43601684031849197 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 59926 10847 LGGPNPGSRGL True PC9_epitope_Rep6 1023.5461420869499 1023.54504993586 52.583 2 -1.6937500859165426 0.43601684031849197 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 74539 6566 NFRPTFSLFSW True NCI_RA007_Epitope_Rep1 1400.6877209402 1400.68606490379 29.554 3 -1.6937711166329599 0.43601684031849197 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9'] 29955 5158 FWFTTKSWKPS True H1975_Epitope_Rep3 1413.70812203161 1413.7070299358602 24.945 2 -1.6938049558183637 0.43601826932740734 1.0 ['ENSG00000133019|ENST00000676153|CHRM3'] 122562 18236 VGFAFTKEDL True H1975_Epitope_Rep2 1125.57062549929 1125.56896490379 75.604 3 -1.6938407996769669 0.43601826932740734 1.0 ['ENST00000459899.1_1_14:35857513-35858113:-|nuORF'] 94830 14367 RSRWERQDRRW True NCI_RA007_Epitope_Rep4 1629.8348877227697 1629.83378993586 62.569 2 -1.694053859372825 0.4360302820518547 1.0 ['ENST00000541775.5_1_12:7270875-7271013:+|nuORF'] 124920 25335 VHRPLDAARGR True PC9_epitope_Rep2 1246.70068566574 1246.69958993586 103.13 2 -1.694145671113537 0.4360302820518547 1.0 ['ENST00000361283.2_1_13:115079997-115086655:+|nuORF'] 35490 7482 GSLQPLPWLC True NCI_RA007_Epitope_Rep1 1112.5688516774799 1112.56774993586 33.095 2 -1.6941756903789043 0.4360302820518547 1.0 ['ENST00000486124.5_1_6:31905151-31913001:+|nuORF'] 32576 11254 GGGTCHRC True H1975_Epitope_Rep2 789.3010267652899 789.3004749679301 48.333 1 -1.6941869627625168 0.4360302820518547 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 124358 20208 VGTVFAFV True PC9_epitope_Rep1 838.4588902223398 838.45778993586 82.559 2 -1.6942109840693214 0.4360302820518547 1.0 ['ENST00000489669.1_1_7:21943673-21945126:-|nuORF'] 136356 26753 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 111.41 2 -1.6942161328134706 0.4360302820518547 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 10542 24942 CLQPKCFTTT True PC9_epitope_Rep2 1140.5307519166 1140.52964993586 101.61 2 -1.694340859478789 0.4360302820518547 1.0 ['ENST00000381920.7_1_16:8736022-8736337:+|nuORF'] 92424 22741 RLRENILFHLY True PC9_epitope_Rep2 1472.82521747252 1472.8241299358601 92.968 2 -1.6943627734209585 0.4360302820518547 1.0 ['ENSG00000185736|ENST00000381312|ADARB2', 'ENST00000469464.1_1_10:1262889-1279753:-|nuORF'] 31294 11487 GDITEDLLLDF True H1975_Epitope_Rep3 1249.6077988536497 1249.6067099358602 49.307 2 -1.6944056107240735 0.4360302820518547 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 27249 6563 FLPPAPAA True NCI_RA007_Epitope_Rep5 782.4326754744999 782.43156993586 31.907 2 -1.6945583996999243 0.43604287628405536 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 133050 25537 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 107.9 2 -1.6945774713736155 0.43604287628405536 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 47639 22899 IWELKMWRFP True PC9_epitope_Rep4 1404.73764833808 1404.73600490379 96.301 3 -1.6946263025791888 0.436049173189223 1.0 ['ENST00000230538.11_1_6:112462098-112462671:-|nuORF'] 36463 13289 GVGGGGHG True NCI_RA007_Epitope_Rep3 596.26667277856 596.2661249679301 59.541 1 -1.6946884192291793 0.4360617665777162 1.0 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 92226 22890 RLKAGHGG True PC9_epitope_Rep2 794.4511195032999 794.45002993586 93.545 2 -1.6947174290710323 0.4360617665777162 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 28221 9478 FRGWFYQWKPY True H1975_Epitope_Rep1 1576.7615545868 1576.7599049037901 41.375 3 -1.6947308299619324 0.43606319432814156 1.0 ['nc|ENSG00000140873|Q8TE60-2|ADAMTS18', 'ENSG00000140873|ENST00000282849|ADAMTS18'] 91415 25146 RHITLDKTW True PC9_epitope_Rep1 1168.63529144452 1168.6341899358601 101.61 2 -1.6947398958271593 0.43606319432814156 1.0 ['ENSG00000095380|ENST00000210444|NANS'] 38649 15703 HFLVKRKTISF True NCI_RA007_Epitope_Rep5 1374.81359015966 1374.8119349037902 67.119 3 -1.694817750087356 0.43606604963770945 1.0 ['ENSG00000178358|ENST00000317834|OR2D3'] 57521 6372 LEDNTFMTLW True H1975_Epitope_Rep1 1268.57472490356 1268.57362993586 29.571 2 -1.6948401919718663 0.43606604963770945 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 136643 5346 WWRPTTRMWNS True PC9_epitope_Rep1 1519.7142871245499 1519.71265490379 25.403 3 -1.6948453412238174 0.43606604963770945 1.0 ['KRT37|p.E275Rfs*49|1|0.49|ENSG00000108417|chr17:41422344-41422344|C/-|frameshift_variant'] 133078 18364 VVPSRPLL True PC9_epitope_Rep3 879.5541875895099 879.55308993586 75.848 2 -1.6948626910304019 0.43606604963770945 1.0 ['nc|ENSG00000099957|O15547-2|P2RX6', 'ENSG00000099957|ENST00000413302|P2RX6'] 122998 16825 VGIFFFFFV True PC9_epitope_Rep6 1121.5949897723299 1121.59388993586 77.226 2 -1.6948982281565375 0.4360723456514458 1.0 ['ENST00000401990.5_1_2:242256943-242257661:+|nuORF'] 55344 14555 LAELDGLH True PC9_epitope_Rep5 866.4497820906199 866.44868993586 60.985 2 -1.694929179002524 0.4360760412131766 1.0 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 92835 21184 RPCQAPLG True NCI_RA007_Epitope_Rep5 840.4276071773999 840.4265099358599 88.518 2 -1.6949446545161795 0.4360760412131766 1.0 ['ENST00000248248.7_1_16:77225118-77227542:+|nuORF'] 21018 20783 EQSLLSRWNPW True H1975_Epitope_Rep2 1414.69934825306 1414.69824993586 86.055 2 -1.6949767030619156 0.4360760412131766 1.0 ['ENSG00000188001|ENST00000345063|TPRG1'] 115735 15462 TSASKKGK True NCI_RA007_Epitope_Rep5 805.46576650793 805.46466993586 66.171 2 -1.6951046586886187 0.4360760412131766 1.0 ['ENSG00000179981|ENST00000580243|TSHZ1', 'nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1', 'TSHZ1|p.P631Tfs*30|1|0.47|ENSG00000179981|chr18:75287291-75287292|-/C|frameshift_variant'] 70256 17813 LVRKARSHIG True NCI_RA007_Epitope_Rep3 1135.6938093801498 1135.6927099358602 78.109 2 -1.695127600291099 0.4360760412131766 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 112689 4865 TLGGGGFW True NCI_RA007_Epitope_Rep1 793.37588887437 793.37478993586 23.005 2 -1.6951345280897427 0.4360760412131766 1.0 ['TENM1|p.K2577Nfs*32|1|0.57|ENSG00000009694|chrX:124380983-124380983|C/-|frameshift_variant'] 126479 16027 VLLGYPVP True H1975_Epitope_Rep3 856.50584041476 856.50529496793 67.105 1 -1.6952000303775498 0.4360760412131766 1.0 ['ENSG00000142102|ENST00000409548|PGGHG', 'ENST00000474221.5_1_11:293333-294746:+|nuORF', 'ENST00000476372.1_1_11:293373-294746:+|nuORF'] 14259 4164 DSPMRSFPLLQ True H1975_Epitope_Rep1 1289.64380752289 1289.64217490379 20.954 3 -1.695216280667539 0.4360760412131766 1.0 ['ENST00000452101.1_1_2:220307854-220309390:+|nuORF'] 71580 22864 MCSSKNPIMSQ True H1975_Epitope_Rep2 1224.5301002935998 1224.52846490379 94.393 3 -1.6952287702669984 0.4360760412131766 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 63327 6449 LLTEEEAALYI True H1975_Epitope_Rep1 1263.6598344265099 1263.65872993586 29.868 2 -1.6953432787527938 0.4360760412131766 1.0 ['ENSG00000174628|ENST00000695302|IQCK', 'ENST00000568300.6_1_16:19775348-19867867:+|nuORF', 'ENST00000568126.5_1_16:19775348-19800271:+|nuORF'] 219 7828 AAFLREER True PC9_epitope_Rep3 990.5246783663799 990.52358993586 35.099 2 -1.6953610384303268 0.4360760412131766 1.0 ['ENST00000477801.1_1_1:153363297-153363519:-|nuORF'] 5016 13542 ALIEHYKTHTR True PC9_epitope_Rep5 1367.73098273451 1367.72988993586 57.111 2 -1.695398566889099 0.4360760412131766 1.0 ['ENSG00000187792|ENST00000341976|ZNF70'] 116153 10130 TSTLILPP True PC9_epitope_Rep2 840.49566965388 840.49456993586 44.303 2 -1.6954025274293523 0.4360760412131766 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 57544 7412 LEDQVQQDAI True NCI_RA007_Epitope_Rep2 1157.55643198713 1157.55532993586 33.456 2 -1.695528608426296 0.43608863090919237 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 104590 22963 SQRIQRPGR True PC9_epitope_Rep1 1096.62137271588 1096.62026993586 93.127 2 -1.6955777668326861 0.43608863090919237 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 12460 8797 DIYLDDLKG True PC9_epitope_Rep5 1050.5233409537 1050.5222499358601 38.78 2 -1.6958172399808367 0.4360894702770275 1.0 ['ENSG00000101577|ENST00000677752|LPIN2'] 84701 11631 QDLPEERGV True PC9_epitope_Rep3 1041.50908787189 1041.50798993586 49.755 2 -1.6958174222005304 0.4360894702770275 1.0 ['ENST00000418618.1_1:31971908-31973444:+|nuORF'] 82869 6274 PRTFEGIDP True NCI_RA007_Epitope_Rep2 1030.5083595958997 1030.5072699358602 29.011 2 -1.6958347086913625 0.4360894702770275 1.0 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 113114 12171 TLPASRCSL True PC9_epitope_Rep5 946.49060135678 946.48950993586 51.805 2 -1.6958960951386866 0.4360894702770275 1.0 ['ENST00000469694.5_1_2:241381745-241403123:+|nuORF'] 133151 25765 VVQVIKLA True NCI_RA007_Epitope_Rep5 868.5745886809199 868.57404496793 106.65 1 -1.6959192662517613 0.4360894702770275 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 21395 8677 ERILPALSK True H1975_Epitope_Rep1 1025.6233297784897 1025.62222993586 38.305 2 -1.6959875824710324 0.4360894702770275 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'ENST00000374089.5_1_1:27426800-27429818:-|nuORF'] 85846 21477 QHETVDSVLR True PC9_epitope_Rep6 1182.5992998586198 1182.59764490379 95.488 3 -1.6960100837002952 0.4360894702770275 1.0 ['ENSG00000007384|ENST00000262316|RHBDF1'] 115955 16443 TSHLETPTV True PC9_epitope_Rep5 983.49237517859 983.49126993586 68.246 2 -1.696026687625396 0.4360894702770275 1.0 ['SVIL|p.S675L|1|0.13|ENSG00000197321|chr10:29531274-29531274|G/A|missense_variant'] 139864 24720 YPPPPLLL True PC9_epitope_Rep2 908.53714054304 908.53604993586 100.76 2 -1.6960636515721097 0.4360894702770275 1.0 ['ENST00000430792.1_1_21:38444859-38445147:-|nuORF'] 84164 10649 PYIFRPPNTI True NCI_RA007_Epitope_Rep4 1216.6604435631998 1216.65934993586 47.812 2 -1.6964260892055458 0.4361515709582008 1.0 ['nc|ENSG00000156475|Q00005-2|PPP2R2B'] 28332 24565 FRRYLSVFF True PC9_epitope_Rep2 1233.66586329681 1233.66421490379 100.11 3 -1.6964896903415214 0.4361578641903656 1.0 ['ENSG00000121807|ENST00000445132|CCR2'] 78772 7000 PAAMDPVVG True PC9_epitope_Rep4 855.4160394341899 855.41494993586 34.172 2 -1.696513198694764 0.4361641572820519 1.0 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9', 'ENST00000595700.5_1_19:44242246-44254893:-|nuORF'] 63642 22298 LMPPPFLV True PC9_epitope_Rep3 912.51429692348 912.5131899358599 91.054 2 -1.6966395538690169 0.43619277216009283 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD1|p.T1501Nfs*4|1|0.17|ENSG00000185658|chr21:39202408-39202409|-/T|frameshift_variant', 'ENSG00000146247|ENST00000275034|PHIP'] 19546 19520 ELPVNYVKPP True NCI_RA007_Epitope_Rep2 1154.63356010902 1154.6324699358602 80.867 2 -1.697009603741591 0.4362611607142857 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'ENST00000478415.1_1_X:79999455-80064970:-|nuORF'] 125468 20466 VIVPGSRQQ True PC9_epitope_Rep6 982.5559784946599 982.55488993586 91.437 2 -1.6970163007741792 0.4362611607142857 1.0 ['ENST00000395246.5_1_5:130599842-130695031:+|nuORF', 'ENST00000504701.5_1_5:130690355-130695031:+|nuORF'] 29575 25418 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 104.38 3 -1.6971302672965975 0.43626745237218334 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 80707 19114 PGYPGEPL True PC9_epitope_Rep3 828.40176926904 828.40066993586 78.745 2 -1.6972726077675173 0.4362737438896453 1.0 ['ENSG00000181409|ENST00000326724|AATK', 'nc|ENSG00000181409|Q6ZMQ8-3|AATK', 'nc|ENSG00000181409|Q6ZMQ8-2|AATK'] 85611 11170 QGIVLGPL True PC9_epitope_Rep2 795.48543932335 795.48434993586 48.291 2 -1.6973483139969545 0.4363023559479035 1.0 ['nc|ENSG00000154380|Q8N8S7|ENAH', 'ENSG00000154380|ENST00000366843|ENAH'] 127422 8045 VNFFRNWENYK True NCI_RA007_Epitope_Rep2 1515.72589735407 1515.72480993586 35.926 2 -1.697514786417842 0.43630864693540466 1.0 ['ENSG00000116194|ENST00000234816|ANGPTL1'] 44277 23666 ILCILGHRQT True H1975_Epitope_Rep2 1152.6437479532399 1152.64210490379 97.526 3 -1.6975484944180252 0.4363149377824898 1.0 ['ENST00000581724.1_1_18:10726700-10726934:+|nuORF'] 73954 3676 NCIHPGFT True PC9_epitope_Rep3 887.39597269595 887.39486993586 19.248 2 -1.6977860211103215 0.4363547083900632 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 137255 22625 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 94.208 2 -1.6980467009278015 0.4363875776952005 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 39921 21611 HPGTLPCP True H1975_Epitope_Rep2 820.3901590395201 820.38906993586 89.404 2 -1.6980485467360555 0.4363875776952005 1.0 ['ENST00000484663.5_1_16:30133562-30134123:-|nuORF'] 30888 20375 GAPRRRKL True PC9_epitope_Rep1 952.6042660997599 952.60316993586 83.197 2 -1.698076476101257 0.4363875776952005 1.0 ['ENSG00000186895|ENST00000334134|FGF3'] 73214 23045 MSARVRTSHL True PC9_epitope_Rep5 1156.61351045412 1156.6124099358601 93.633 2 -1.6981178042428822 0.4363875776952005 1.0 ['ENST00000238714.7_1_2:60988922-60995939:+|nuORF'] 135798 7159 WNDKVKEALR True NCI_RA007_Epitope_Rep3 1257.6829699129298 1257.68131490379 35.277 3 -1.6981508234251987 0.4363875776952005 1.0 ['OR9A2|p.R289W|2|0.19|ENSG00000179468|chr7:143026268-143026268|G/A|missense_variant'] 109006 7625 TAHFARPAV True PC9_epitope_Rep2 968.5191990631198 968.51810993586 34.701 2 -1.698214550469351 0.4363875776952005 1.0 ['ENSG00000139182|ENST00000266546|CLSTN3', 'nc|ENSG00000139182|Q9BQT9-2|CLSTN3'] 20412 17584 EPEAGEVS True H1975_Epitope_Rep2 816.350127619 816.34902993586 72.949 2 -1.6983291776184972 0.4363875776952005 1.0 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-2|PCDHA1', 'ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'ENSG00000249158|ENST00000398640|PCDHA11', 'ENSG00000204965|ENST00000529859|PCDHA5', 'nc|ENSG00000204965|Q9Y5H7-3|PCDHA5', 'ENSG00000204967|ENST00000530339|PCDHA4', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'ENSG00000081842|ENST00000529310|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'ENSG00000250120|ENST00000307360|PCDHA10', 'ENSG00000248383|ENST00000253807|PCDHAC1', 'ENSG00000251664|ENST00000398631|PCDHA12'] 58017 11529 LEHLRITV True PC9_epitope_Rep6 979.58146496651 979.58036993586 55.43 2 -1.6985157945697085 0.43642734394179483 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 10496 18889 CITPKRRLTR True PC9_epitope_Rep6 1242.7342942931398 1242.73264490379 85.304 3 -1.6986271021484556 0.43642876272094266 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 72094 4574 MFETFHLEFHY True NCI_RA007_Epitope_Rep1 1499.6543722065896 1499.6527349037901 21.887 3 -1.6986344424645405 0.43642876272094266 1.0 ['CUBN|p.T2323Hfs*11|1|0.33|ENSG00000107611|chr10:16918656-16918656|G/-|frameshift_variant', 'CUBN|p.A2835Pfs*18|1|0.16|ENSG00000107611|chr10:16899091-16899091|C/-|frameshift_variant', 'CUBN|p.H3198Tfs*23|1|0.09|ENSG00000107611|chr10:16851307-16851307|A/-|frameshift_variant', 'ENSG00000107611|ENST00000377833|CUBN'] 79632 16645 PDNADMWG True NCI_RA007_Epitope_Rep5 904.33851738948 904.33742993586 70.791 2 -1.6989558968632954 0.43646162257456234 1.0 ['ENST00000517917.5_1_8:42128977-42177019:+|nuORF', 'ENST00000520201.5_1_8:42128977-42147678:+|nuORF', 'ENST00000517812.5_1_8:42129241-42147678:+|nuORF', 'ENST00000342222.6_1_8:42128977-42146162:+|nuORF', 'ENST00000518679.5_1_8:42129623-42171892:+|nuORF', 'ENST00000519733.5_1_8:42128977-42166452:+|nuORF'] 59457 16284 LFPVPPGV True PC9_epitope_Rep3 824.4796256669199 824.47852993586 67.773 2 -1.6990067743222987 0.43646162257456234 1.0 ['ENST00000357681.9_1_1:203711927-203711975:+|nuORF'] 8969 20485 AVGHHISE True NCI_RA007_Epitope_Rep3 848.4140652882401 848.41296993586 89.249 2 -1.699009250157661 0.43646162257456234 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 44380 16649 ILETLDALVDP True PC9_epitope_Rep6 1197.6492697428098 1197.64816993586 76.509 2 -1.69902739383977 0.43646162257456234 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2', 'ENST00000483634.1_1_6:24408642-24418827:+|nuORF'] 114424 6952 TPTSADTRTG True PC9_epitope_Rep4 1005.47270236317 1005.47160993586 33.977 2 -1.6990277893667907 0.43646162257456234 1.0 ['ENST00000594641.1_1_19:51462406-51462502:-|nuORF'] 80548 8463 PGPLSKQGS True PC9_epitope_Rep3 869.46068112749 869.45958993586 37.515 2 -1.699123057865114 0.43646162257456234 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 102408 12985 SLTLKDRMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 57.84 2 -1.6991303438438308 0.43646162257456234 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 93874 11337 RREPLQMED True PC9_epitope_Rep5 1172.5608061749197 1172.5597099358602 48.604 2 -1.6991984577174164 0.43649022583236635 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 69232 7345 LTSSPRLK True PC9_epitope_Rep2 900.53926580136 900.53816993586 33.633 2 -1.6994479656403751 0.43651882845188283 1.0 ['ENST00000397632.7_1_11:408839-409933:-|nuORF'] 112230 16412 TKLSLGSYAAL True PC9_epitope_Rep5 1122.62847472858 1122.62683490379 68.128 3 -1.6995619949228442 0.4365196242497267 1.0 ['ENSG00000136490|ENST00000259006|LIMD2'] 97089 8361 SDGSVGPV True NCI_RA007_Epitope_Rep3 716.33408363204 716.3335349679301 39.991 1 -1.6996051640281729 0.4365196242497267 1.0 ['COL1A2|p.F579Lfs*103|1|0.18|ENSG00000164692|chr7:94415241-94415241|T/-|frameshift_variant', 'ENSG00000164692|ENST00000297268|COL1A2'] 77774 19912 NTRKIMRKGKF True NCI_RA007_Epitope_Rep5 1377.8027082061296 1377.8016099358601 83.506 2 -1.6996076917269571 0.4365196242497267 1.0 ['ENST00000299204.4_1_14:104025759-104025864:-|nuORF'] 131530 22110 VTKTSIKI True PC9_epitope_Rep1 888.5644179200399 888.56332993586 89.859 2 -1.6996223181579815 0.4365196242497267 1.0 ['nc|ENSG00000120659|O14788-2|TNFSF11', 'nc|ENSG00000120659|O14788-3|TNFSF11', 'ENSG00000120659|ENST00000398795|TNFSF11'] 72816 23307 MPGLNFFRDV True NCI_RA007_Epitope_Rep5 1194.58556437078 1194.58390490379 96.935 3 -1.699677234868553 0.4365196242497267 1.0 ['DGKB|p.M667Ifs*8|1|0.04|ENSG00000136267|chr7:14338629-14338639|ATCCTCCATGC/-|frameshift_variant', 'ENST00000403963.5_1_7:14249142-14880939:-|nuORF', 'ENSG00000136267|ENST00000402815|DGKB', 'nc|ENSG00000136267|Q9Y6T7-2|DGKB', 'nc|ENSG00000136267|Q9Y6T7|DGKB'] 141170 4652 YSTSLMENLPV True NCI_RA007_Epitope_Rep2 1252.6009396514 1252.5998499358602 22.722 2 -1.6996936582721767 0.4365196242497267 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 32436 19895 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 83.439 2 -1.6997432734966154 0.4365196242497267 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 71378 15035 LYRNPKEWTKK True NCI_RA007_Epitope_Rep2 1461.8092330552097 1461.80812993586 63.168 2 -1.6998646976536258 0.4365196242497267 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 109552 4782 TDSPAATVL True NCI_RA007_Epitope_Rep4 873.44436235701 873.44326993586 24.83 2 -1.6999596329169895 0.4365196242497267 1.0 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 18150 10075 EIKDLCCGHC True H1975_Epitope_Rep3 1119.45112169691 1119.4500299358601 43.792 2 -1.7001592710973723 0.43656079520733626 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152'] 80147 10851 PFRNHFYQFGE True H1975_Epitope_Rep3 1440.65748344108 1440.6558449037902 46.82 3 -1.7001714065157418 0.43656079520733626 1.0 ['ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 13667 6703 DPRDAEDAI True PC9_epitope_Rep4 1000.4461532621599 1000.44504993586 32.968 2 -1.7001870548233038 0.43656079520733626 1.0 ['ENSG00000111786|ENST00000229390|SRSF9'] 48582 25740 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 106.75 3 -1.7004159600222841 0.43658939289140763 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 136518 22019 WVWHWRRWVHA True NCI_RA007_Epitope_Rep1 1617.82180385793 1617.8207099358601 90.194 2 -1.7009112036376741 0.43667454934856326 1.0 ['ENST00000233202.10_1_2:219261288-219261426:+|nuORF'] 125079 16117 VIEALLVP True NCI_RA007_Epitope_Rep5 852.5320551625999 852.53094993586 68.722 2 -1.7009128072357473 0.43667454934856326 1.0 ['ENSG00000119689|ENST00000334220|DLST', 'ENST00000556582.5_1_14:75348625-75357926:+|nuORF', 'ENST00000555071.5_1_14:75348653-75357926:+|nuORF', 'nc|ENSG00000119689|P36957-2|DLST', 'ENST00000555988.1_2_14:75356010-75360059:+|nuORF'] 122074 9709 VFYTVVFP True NCI_RA007_Epitope_Rep4 970.5164050984598 970.51530993586 44.19 2 -1.700934452866696 0.43667454934856326 1.0 ['OR5AS1|p.N299Mfs*7|1|0.15|ENSG00000181785|chr11:56031310-56031310|A/-|frameshift_variant', 'ENSG00000181785|ENST00000641320|OR5AS1', 'OR5AS1|p.M284I|1|0.23|ENSG00000181785|chr11:56031270-56031270|G/T|missense_variant'] 22484 21244 ETFPAGPRESD True H1975_Epitope_Rep2 1204.5360308957197 1204.5349299358602 87.924 2 -1.7009824527751893 0.43667454934856326 1.0 ['ENST00000375251.7_1_9:99252353-99252437:+|nuORF'] 66295 8335 LSFPELEVTW True H1975_Epitope_Rep1 1219.6124903112698 1219.6113899358602 36.992 2 -1.7011398819069237 0.43667454934856326 1.0 ['ENST00000520537.1_1_17:78388994-78389705:+|nuORF'] 64109 11460 LPDSLIAP True H1975_Epitope_Rep3 824.4643695256 824.46326993586 49.2 2 -1.701142420223134 0.43667454934856326 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP'] 92838 14064 RPDASARSV True PC9_epitope_Rep4 957.49919189453 957.49808993586 62.006 2 -1.701259380629661 0.43667454934856326 1.0 ['ENST00000541278.5_1_11:63993530-63993668:-|nuORF'] 67425 5160 LSSPDSRAA True PC9_epitope_Rep5 902.4457593393399 902.44466993586 24.868 2 -1.7012628143947677 0.43667454934856326 1.0 ['ENST00000488216.5_1_X:48434299-48434428:+|nuORF'] 79529 25361 PCRQRLRHSE True NCI_RA007_Epitope_Rep5 1280.65202122116 1280.6509299358602 105.08 2 -1.7012713168087228 0.43667454934856326 1.0 ['ENSG00000132635|ENST00000360652|PCED1A', 'nc|ENSG00000132635|Q9H1Q7-2|PCED1A', 'nc|ENSG00000132635|Q9H1Q7-3|PCED1A'] 5887 2626 APGHPDAAPP True NCI_RA007_Epitope_Rep3 928.4402800360799 928.43918993586 14.79 2 -1.7012879643040388 0.43667454934856326 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6'] 103339 19023 SPMTAAAC True NCI_RA007_Epitope_Rep4 750.30404645706 750.3029499358599 82.293 2 -1.701491192663933 0.43672545148300596 1.0 ['ENSG00000185262|ENST00000327490|UBALD2'] 44633 18932 ILSAILRIPSA True PC9_epitope_Rep6 1152.72304381976 1152.72194993586 85.467 2 -1.7015593129843822 0.4367651979921919 1.0 ['ENSG00000221931|ENST00000327930|OR6X1'] 83090 4753 PSNNLNLLS True NCI_RA007_Epitope_Rep4 970.5083595959001 970.50726993586 24.717 2 -1.70161520799489 0.43677917326611193 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 24911 25314 FCDVHPVL True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 104.9 2 -1.7016232893651444 0.43677917326611193 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4S2|p.H241Tfs*40|1|0.3|ENSG00000174982|chr11:55651622-55651622|C/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 113900 17142 TNQLKIVEI True H1975_Epitope_Rep3 1056.6179100448799 1056.6168099358601 71.568 2 -1.7016307408982712 0.43677917326611193 1.0 ['PDZD2|p.S2678Hfs*5|1|0.32|ENSG00000133401|chr5:32098446-32098446|C/-|frameshift_variant', 'ENSG00000133401|ENST00000438447|PDZD2', 'nc|ENSG00000133401|O15018-2|PDZD2'] 84302 13778 PYRVYKNQIY True PC9_epitope_Rep4 1342.70337100434 1342.7022699358602 60.893 2 -1.7016360900357466 0.43677917326611193 1.0 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10'] 16614 24284 EEPPARQP True H1975_Epitope_Rep3 922.45084471978 922.44974993586 101.15 2 -1.7016833624333403 0.4367854553566449 1.0 ['ENST00000608937.5_1_9:137000533-137000803:+|nuORF'] 68741 15647 LTLCLSSRSV True PC9_epitope_Rep1 1077.58523001761 1077.5841299358601 65.007 2 -1.7020954751099837 0.4368586597662175 1.0 ['ENST00000473996.1_1_3:48454981-48455344:-|nuORF'] 55124 5979 LAACPRCW True NCI_RA007_Epitope_Rep2 918.42041362198 918.41930993586 27.867 2 -1.7022945586308347 0.4368608295136449 1.0 ['ENST00000378052.5_1_7:148991082-148992133:+|nuORF', 'ENST00000480864.1_1_7:148991400-148992133:+|nuORF', 'ENST00000476295.5_1_7:148991497-148992133:+|nuORF', 'ENST00000481519.5_1_7:148990933-148994165:+|nuORF'] 125308 7846 VINVIRVTI True NCI_RA007_Epitope_Rep1 1025.6597152872098 1025.65860993586 34.51 2 -1.7024294664644155 0.4368608295136449 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 10217 3909 CCCCCCCS True PC9_epitope_Rep2 826.10688658094 826.10578993586 20.301 2 -1.7025054834327773 0.4368608295136449 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 365 24382 AAKLGNAKAQ True PC9_epitope_Rep2 970.5559784946599 970.55488993586 99.352 2 -1.7025396029898245 0.4368608295136449 1.0 ['nc|ENSG00000159921|Q9Y223-4|GNE', 'nc|ENSG00000159921|Q9Y223-3|GNE', 'ENSG00000159921|ENST00000642385|GNE', 'nc|ENSG00000159921|Q9Y223-2|GNE', 'nc|ENSG00000159921|Q9Y223-5|GNE'] 48611 26717 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 110.14 3 -1.702610536599964 0.4368608295136449 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 112752 13494 TLHLHMIFLR True PC9_epitope_Rep2 1279.72233262711 1279.72069490379 57.192 3 -1.7026559746792478 0.4368608295136449 1.0 ['ENSG00000112276|ENST00000314641|BVES'] 86418 6675 QKKAQSEA True H1975_Epitope_Rep1 888.4664947839199 888.46538993586 30.728 2 -1.7026688808925632 0.4368608295136449 1.0 ['ENST00000606621.1_1_6:85472927-85473008:-|nuORF'] 110534 5261 TFLNRGED True NCI_RA007_Epitope_Rep2 950.4457593393398 950.44466993586 25.085 2 -1.7027354035209386 0.4368608295136449 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 92172 18799 RLFRMLRIF True NCI_RA007_Epitope_Rep3 1250.7434024248598 1250.74174490379 82.209 3 -1.702748219715743 0.4368608295136449 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 9644 9381 AYDRQQLWKAN True H1975_Epitope_Rep2 1391.6945972257897 1391.6935099358602 41.046 2 -1.7027648162454652 0.4368608295136449 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 108022 6167 SWWGHYWEPFR True NCI_RA007_Epitope_Rep1 1549.6891179225302 1549.6880299358602 28.025 2 -1.7027700551581058 0.4368608295136449 1.0 ['F5|p.D2094H|1|0.11|ENSG00000198734|chr1:169518477-169518477|C/G|missense_variant'] 8827 5596 AVEEYVYDFRD True NCI_RA007_Epitope_Rep3 1404.6197605196796 1404.61866993586 29.005 2 -1.7028745247829407 0.43686710978275417 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 82458 22475 PPPYHDAL True H1975_Epitope_Rep3 908.43921740692 908.43812993586 93.949 2 -1.7029294857614847 0.4368733899117867 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 5395 16775 ALSRRVEKHW True NCI_RA007_Epitope_Rep1 1280.71018772028 1280.7090899358602 69.378 2 -1.7031262737252078 0.4369082535044775 1.0 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'ENST00000460032.1_1_X:24091216-24091381:+|nuORF'] 61078 26210 LIHGTADD True PC9_epitope_Rep1 840.39774651776 840.39664993586 106.17 2 -1.703167066517435 0.4369082535044775 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 113442 11108 TLSPTWNQ True PC9_epitope_Rep1 945.45559574705 945.45448993586 47.612 2 -1.703257052535074 0.43691453296458205 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.N1652Tfs*30|1|0.17|ENSG00000214814|chr8:124101166-124101166|C/-|frameshift_variant', 'FER1L6|p.R1073Gfs*13|1|0.1|ENSG00000214814|chr8:124061918-124061918|G/-|frameshift_variant'] 32678 16809 GGRGSHCP True NCI_RA007_Epitope_Rep4 769.32895576529 769.32840496793 72.836 1 -1.703311857104342 0.4369208122846342 1.0 ['ENST00000215555.6_1_19:8495585-8503477:+|nuORF'] 124114 8341 VGSPQAPP True PC9_epitope_Rep3 751.3864535580699 751.3859049679301 37.055 1 -1.7034187369969749 0.43693337050459996 1.0 ['nc|ENSG00000125861|Q9GZZ7-3|GFRA4'] 33805 25479 GLLPEPRRK True PC9_epitope_Rep1 1064.6454622054 1064.64487496793 102.99 1 -1.7034715767721724 0.43693337050459996 1.0 ['ENST00000532257.1_3_2:17935566-17941189:+|nuORF', 'ENST00000524465.5_3_2:17935566-17941221:+|nuORF'] 83386 3871 PTHVTLTT True PC9_epitope_Rep4 868.46543215476 868.46432993586 21.071 2 -1.7035328716903557 0.43693964940452296 1.0 ['nc|ENSG00000006432|P80192-4|MAP3K9', 'ENSG00000006432|ENST00000554752|MAP3K9'] 10215 3678 CCCCCCCS True PC9_epitope_Rep2 826.10688658094 826.10578993586 19.416 2 -1.7036809754665945 0.4369682304269768 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 97292 21552 SEALCGVP True H1975_Epitope_Rep3 774.3581902049 774.35764496793 90.058 1 -1.7039282390835178 0.43700796181895224 1.0 ['ENST00000609537.5_1_20:62333085-62338084:-|nuORF', 'nc|ENSG00000101246|Q13795-3|ARFRP1', 'nc|ENSG00000101246|Q13795-2|ARFRP1', 'ENSG00000101246|ENST00000622789|ARFRP1'] 97225 4478 SDYSFSVIAMS True PC9_epitope_Rep4 1205.52744035797 1205.52634993586 23.692 2 -1.7040071156196224 0.4370142396770704 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 62414 24557 LLHATLTT True H1975_Epitope_Rep1 868.5018176634801 868.50072993586 101.76 2 -1.7040716971362109 0.4370316681534344 1.0 ['ENST00000541199.5_3_6:142623767-142688843:+|nuORF', 'ENST00000435011.6_3_6:142623767-142688843:+|nuORF'] 73545 5283 MVPYRDSKLTH True NCI_RA007_Epitope_Rep3 1345.68125566077 1345.67959490379 27.788 3 -1.7042787841683027 0.4370358807394688 1.0 ['nc|ENSG00000137807|Q02241-3|KIF23', 'KIF23|p.E783Tfs*19|1|0.08|ENSG00000137807|chr15:69441046-69441047|-/ACAGGAA|frameshift_variant', 'nc|ENSG00000137807|Q02241-2|KIF23', 'nc|ENSG00000137807|Q02241|KIF23', 'ENSG00000137807|ENST00000679126|KIF23'] 113994 24837 TPALKKLA True PC9_epitope_Rep4 840.5432885526399 840.54218993586 104.04 2 -1.7044155551175797 0.4370358807394688 1.0 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000487404.5_1_1:33241584-33248146:-|nuORF'] 109349 6814 TCESIPEELQ True NCI_RA007_Epitope_Rep1 1147.50670491339 1147.50560993586 30.513 2 -1.7044389179753094 0.4370358807394688 1.0 ['CNTN6|p.W721C|1|0.05|ENSG00000134115|chr3:1377072-1377072|G/T|missense_variant'] 56194 14901 LAWVPEAQR True PC9_epitope_Rep5 1068.5716285587998 1068.5705299358601 62.32 2 -1.7045070834908556 0.4370358807394688 1.0 ['ENSG00000011332|ENST00000355526|DPF1', 'nc|ENSG00000011332|Q92782-1|DPF1', 'nc|ENSG00000011332|Q92782-3|DPF1'] 5908 24891 APGLRLVLP True PC9_epitope_Rep1 934.5963867546599 934.59583496793 100.66 1 -1.7045207571324972 0.4370358807394688 1.0 ['ENST00000395808.7_1_19:890970-891072:-|nuORF'] 121940 15991 VFSPDGSY True PC9_epitope_Rep1 870.37594844402 870.3753949679301 66.32 1 -1.7045495249989224 0.4370358807394688 1.0 ['nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1', 'ENST00000479942.5_1_2:234198871-234202993:+|nuORF'] 80057 4602 PFKHDVFLLE True PC9_epitope_Rep5 1243.6601092100298 1243.6584749037902 22.76 3 -1.7046569034299712 0.4370463692818838 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 140696 15977 YRYCYLNWDHY True H1975_Epitope_Rep3 1594.66633387262 1594.66522993586 66.913 2 -1.7047207414980723 0.4370463692818838 1.0 ['nc|ENSG00000163354|Q5T1A1-2|DCST2', 'ENSG00000163354|ENST00000368424|DCST2'] 38552 21524 HETGHVLG True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 89.874 2 -1.7047236258804142 0.4370463692818838 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 111674 20164 TIERCFILFFS True PC9_epitope_Rep1 1374.7005941230198 1374.6994899358601 82.39 2 -1.7047371918643441 0.4370463692818838 1.0 ['ENST00000336314.8_2_5:154194204-154194450:+|nuORF'] 119172 11153 VAIYPYPLVL True PC9_epitope_Rep5 1146.66888298858 1146.66724490379 47.884 3 -1.704789227419112 0.4370463692818838 1.0 ['ENSG00000168412|ENST00000307161|MTNR1A', 'MTNR1A|p.A252Lfs*3|1|0.11|ENSG00000168412|chr4:186533988-186533988|C/-|frameshift_variant'] 83201 16837 PSTRPCPG True NCI_RA007_Epitope_Rep1 813.3803226318099 813.3797749679301 69.621 1 -1.7048091962495886 0.4370463692818838 1.0 ['ENST00000467148.1_1_20:62201918-62203710:-|nuORF'] 123901 22613 VGRRRTSR True PC9_epitope_Rep2 986.5845932843399 986.58404496793 92.477 1 -1.7049139441782009 0.4370463692818838 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 30750 13422 GALPPRHL True PC9_epitope_Rep6 859.50282072299 859.50172993586 63.309 2 -1.705141663869356 0.43709724173300335 1.0 ['ADGRL3|p.L1138Cfs*58|1|0.3|ENSG00000150471|chr4:62037754-62037754|C/-|frameshift_variant', 'ADGRL3|p.C1124Lfs*72|1|0.37|ENSG00000150471|chr4:62031594-62031594|G/-|frameshift_variant', 'ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.I896Sfs*18|1|0.22|ENSG00000150471|chr4:61979645-61979672|GCATCTTCACATTTTGCTTTTTCCGGGG/-|frameshift_variant', 'ADGRL3|p.G194Efs*19|1|0.27|ENSG00000150471|chr4:61732939-61732939|G/-|frameshift_variant', 'ADGRL3|p.S348Mfs*4|1|0.22|ENSG00000150471|chr4:61733401-61733402|-/T|frameshift_variant'] 25885 13810 FFLEARLKHYY True H1975_Epitope_Rep3 1485.7768702977698 1485.7757699358601 58.425 2 -1.705203464641958 0.4371000468237865 1.0 ['ENST00000178638.7_1_15:63615668-63615971:-|nuORF'] 4571 22745 AKPGGFGMG True NCI_RA007_Epitope_Rep5 820.3901590395199 820.38906993586 94.684 2 -1.705319391908703 0.4371000468237865 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 103476 10144 SPQEVLSPA True PC9_epitope_Rep5 926.4709114580198 926.4703649679301 44.004 1 -1.705339909474514 0.4371000468237865 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 41487 24323 HYLRRSSP True H1975_Epitope_Rep3 1014.53591175642 1014.53480993586 101.29 2 -1.705350787230805 0.4371000468237865 1.0 ['ENSG00000106125|ENST00000265299|MINDY4'] 69761 25476 LVFRKPRGLFI True NCI_RA007_Epitope_Rep3 1344.8394109846797 1344.83776490379 110.13 3 -1.7055582377841738 0.437123745819398 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 91138 17182 RFVRRLLYF True NCI_RA007_Epitope_Rep4 1268.75059598028 1268.74948993586 74.407 2 -1.7055607831275603 0.437123745819398 1.0 ['RICTOR|p.T1704Nfs*4|1|0.07|ENSG00000164327|chr5:38942320-38942321|-/T|frameshift_variant', 'ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR', 'RICTOR|p.L717Qfs*8|1|0.15|ENSG00000164327|chr5:38959219-38959223|GGAAA/-|frameshift_variant'] 61558 25368 LKIELYKKTK True PC9_epitope_Rep5 1262.7962087600197 1262.7951099358602 102.79 2 -1.7055950007136305 0.4371280176545329 1.0 ['nc|ENSG00000138336|Q8NFU7-4|TET1'] 128998 26006 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 105.61 2 -1.7056308623662018 0.4371280176545329 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 130388 10360 VSLFKRSL True PC9_epitope_Rep5 948.5756513100799 948.57454993586 44.834 2 -1.7056404165968526 0.4371280176545329 1.0 ['ENST00000534277.5_1_16:31765895-31765964:+|nuORF'] 15459 9845 EALLGQATPPG True NCI_RA007_Epitope_Rep2 1052.55022440788 1052.54912993586 42.919 2 -1.705663286181613 0.4371280176545329 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF', 'nc|ENSG00000158773|P22415-2|USF1'] 139219 21950 YLFKRFIF True PC9_epitope_Rep2 1132.64333694708 1132.64222993586 89.905 2 -1.7056912923022458 0.4371280176545329 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 40770 13298 HRTGFTLA True H1975_Epitope_Rep2 901.47699989797 901.47590993586 56.281 2 -1.705700061830818 0.4371280176545329 1.0 ['ENST00000319481.7_1_18:21743105-21745110:-|nuORF'] 139518 17716 YLSPNQLSR True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 72.94 2 -1.7057587938744212 0.4371280176545329 1.0 ['ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'ENST00000509742.1_1_6:166826252-166837415:-|nuORF'] 45359 10550 IQDLLELSPPE True H1975_Epitope_Rep3 1252.6550833992399 1252.6539899358602 45.648 2 -1.7059242943329394 0.4371280176545329 1.0 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 102560 23210 SLVVAFICKLH True PC9_epitope_Rep3 1228.7002002002 1228.6991099358602 94.552 2 -1.7059414380699993 0.4371280176545329 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2'] 122316 19250 VGCGFCGK True H1975_Epitope_Rep3 769.3251162548099 769.3245649679301 80.718 1 -1.7059938229326626 0.4371280176545329 1.0 ['ENSG00000135220|ENST00000251566|UGT2A3'] 107051 15488 SVFYTIYT True NCI_RA007_Epitope_Rep5 992.485498893 992.48440993586 66.269 2 -1.706041862645486 0.4371280176545329 1.0 ['nc|ENSG00000176290|Q96R72|OR4K3'] 57398 16417 LEAQEYRLY True H1975_Epitope_Rep1 1183.5873381925899 1183.58624993586 68.509 2 -1.706055966497555 0.4371280176545329 1.0 ['nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2'] 84671 24333 QDIRRRERKL True PC9_epitope_Rep4 1368.8062133634396 1368.8051099358602 102.08 2 -1.7061204896220945 0.4371280176545329 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 141710 15765 YTVGLGQTRM True PC9_epitope_Rep5 1124.5648289262 1124.56372993586 65.634 2 -1.706333133726124 0.4371280176545329 1.0 ['nc|ENSG00000134240|P54868-3|HMGCS2', 'nc|ENSG00000134240|P54868-2|HMGCS2', 'ENSG00000134240|ENST00000369406|HMGCS2'] 53497 24642 KRKFAGLLKN True PC9_epitope_Rep4 1173.7346115629696 1173.73297490379 103.28 3 -1.70635995665416 0.4371280176545329 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 22571 21067 ETKRKEKL True PC9_epitope_Rep6 1030.6134933707797 1030.6123899358602 93.858 2 -1.7063887960001392 0.4371280176545329 1.0 ['ENST00000398505.7_1_21:43413696-43413789:-|nuORF'] 55 18264 AAAGRRRQAP True NCI_RA007_Epitope_Rep1 1052.59515796804 1052.59457496793 75.183 1 -1.7064495434107647 0.4371280176545329 1.0 ['nc|ENSG00000112541|A8K010|LINC00473', 'ENST00000455853.1_1_6:166353685-166401023:-|nuORF'] 70263 19309 LVRKARSHIG True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 81.149 2 -1.706483387603439 0.4371280176545329 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 140465 13951 YRHTHLDDP True NCI_RA007_Epitope_Rep5 1152.5312202987998 1152.52957490379 60.346 3 -1.7065084510641952 0.4371280176545329 1.0 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6'] 53875 13252 KTKGAGGG True NCI_RA007_Epitope_Rep3 674.3711378470998 674.3705849679301 59.402 1 -1.7065241806777802 0.4371280176545329 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 91933 17664 RKLYNVMFAKK True NCI_RA007_Epitope_Rep3 1396.8013112237998 1396.79965490379 77.452 3 -1.7065500106047597 0.4371280176545329 1.0 ['ENSG00000111254|ENST00000228850|AKAP3', 'AKAP3|p.G450Vfs*23|1|0.75|ENSG00000111254|chr12:4627553-4627553|C/-|frameshift_variant'] 105076 10958 SRDRPVCARGP True H1975_Epitope_Rep3 1212.6145730832798 1212.6134699358602 47.238 2 -1.70657748556653 0.4371280176545329 1.0 ['ENST00000303538.12_1_4:39929740-39979529:-|nuORF'] 71377 15027 LYRNPKEWTKK True NCI_RA007_Epitope_Rep1 1461.8092330552097 1461.80812993586 62.518 2 -1.706626236580877 0.4371342910959286 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 29213 4570 FTTLPSPS True NCI_RA007_Epitope_Rep2 848.42798401688 848.42688993586 22.403 2 -1.7067969806334753 0.4371405643974856 1.0 ['ENST00000542466.2_1_12:58120838-58121579:+|nuORF'] 27056 15232 FLFFVMILF True PC9_epitope_Rep1 1175.64531109303 1175.64367490379 63.41 3 -1.7068077213870343 0.4371468375592087 1.0 ['GOLT1B|p.G25V|1|0.51|ENSG00000111711|chr12:21506933-21506933|G/T|missense_variant'] 59143 23444 LEYVRAFLKH True PC9_epitope_Rep3 1274.7135417652198 1274.7124499358601 95.454 2 -1.7068691465078594 0.43715311058110246 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'ENST00000567567.5_1_15:31233675-31258111:-|nuORF', 'ENST00000568547.5_1_15:31233444-31253097:-|nuORF', 'ENST00000565728.5_1_15:31239263-31253097:-|nuORF', 'ENST00000568604.5_1_15:31235080-31253097:-|nuORF'] 98446 7684 SFFPQPQPP True NCI_RA007_Epitope_Rep4 1043.50763131991 1043.50652993586 36.219 2 -1.707101751394122 0.43717612971527275 1.0 ['ENST00000467837.5_1_1:160313501-160313621:+|nuORF'] 31281 24363 GDGSPCPV True H1975_Epitope_Rep1 730.29558994834 730.29504496793 101.03 1 -1.7071797038536147 0.43717612971527275 1.0 ['ENST00000461408.2_1_15:59041051-59041905:-|nuORF'] 122610 2697 VGFPPFYRW True PC9_epitope_Rep3 1167.58655034695 1167.5854499358602 14.835 2 -1.7071928311664801 0.43717612971527275 1.0 ['ENST00000554012.5_1_14:96176426-96176717:-|nuORF'] 34257 18502 GNRLRAELGR True NCI_RA007_Epitope_Rep4 1140.64758746372 1140.64648993586 80.081 2 -1.7072832583307342 0.43717612971527275 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 9345 13027 AVRTFVSH True H1975_Epitope_Rep1 915.4926499621099 915.49154993586 55.191 2 -1.707291519708942 0.43717612971527275 1.0 ['ENST00000591478.1_1_16:5080487-5083590:-|nuORF', 'nc|ENSG00000103174|Q9UK23-3|NAGPA', 'ENST00000568202.5_1_16:5075546-5083878:-|nuORF', 'nc|ENSG00000103174|Q9UK23-2|NAGPA', 'ENSG00000103174|ENST00000312251|NAGPA'] 55993 9094 LASHGRVL True PC9_epitope_Rep3 851.49773534255 851.49662993586 39.92 2 -1.707303183659677 0.43717612971527275 1.0 ['ENST00000379066.5_1_2:37543393-37543606:-|nuORF'] 58814 17073 LESPFRIL True PC9_epitope_Rep6 973.5596668927699 973.55856993586 78.24 2 -1.7074067148766827 0.43717612971527275 1.0 ['ENST00000395900.1_1_11:32457375-32459526:+|nuORF'] 132550 11768 VVDTVLAL True NCI_RA007_Epitope_Rep4 828.4956696538799 828.49456993586 52.239 2 -1.7074340497500928 0.43717612971527275 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 81796 11595 PLPPPGAL True PC9_epitope_Rep2 760.44832553864 760.44722993586 49.927 2 -1.7074496014665712 0.43717612971527275 1.0 ['ENST00000552279.1_1_12:58149512-58151020:+|nuORF', 'ENSG00000139266|ENST00000266643|MARCHF9'] 132694 11975 VVGWPKGM True NCI_RA007_Epitope_Rep3 872.4578446765199 872.45674993586 54.225 2 -1.7076030363789787 0.4371789300081347 1.0 ['ENST00000430974.6_1_6:133562627-133562813:+|nuORF'] 113357 24702 TLRRTYKK True NCI_RA007_Epitope_Rep5 1064.6454622053998 1064.6443699358601 102.5 2 -1.70767343821549 0.4371789300081347 1.0 ['TCEAL5|p.T124Rfs*17|1|0.23|ENSG00000204065|chrX:103274195-103274195|C/-|frameshift_variant'] 3627 9546 AGPGRLRL True PC9_epitope_Rep6 838.5137197598599 838.51262993586 47.004 2 -1.707702506068689 0.4371789300081347 1.0 ['ENSG00000225556|ENST00000694868|C2CD4D'] 15 6983 AAAAAAPGPM True PC9_epitope_Rep1 826.4007237232199 826.39962993586 31.665 2 -1.7077123970612593 0.4371789300081347 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant'] 37656 9233 GVWVHLDIAAP True PC9_epitope_Rep3 1176.6291434349198 1176.6280499358602 40.456 2 -1.7078829475280506 0.43719427266142963 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000525068.1_1_20:57288807-57289834:+|nuORF'] 31355 8966 GDQGWILM True PC9_epitope_Rep5 918.4269384710599 918.4263849679301 39.431 1 -1.707885677645305 0.43719427266142963 1.0 ['ENST00000358595.9_2_1:150825241-150830924:-|nuORF'] 38549 23008 HETGHVLG True H1975_Epitope_Rep3 848.41406528824 848.41296993586 96.107 2 -1.7079119387953996 0.43719427266142963 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 23512 21690 EVVHSNNM True NCI_RA007_Epitope_Rep5 928.40726565564 928.40616993586 90.534 2 -1.708065796305095 0.43719427266142963 1.0 ['ENST00000271469.7_2_1:162569461-162569569:+|nuORF'] 78197 13316 NYEKIYKEIEC True H1975_Epitope_Rep1 1430.6751672208197 1430.6740699358602 56.324 2 -1.7080830667216813 0.43719427266142963 1.0 ['ENSG00000163634|ENST00000295899|THOC7'] 77447 22324 NSSRPSNQ True PC9_epitope_Rep1 888.4049571565199 888.40386993586 90.683 2 -1.708088177969149 0.43719427266142963 1.0 ['ENSG00000111412|ENST00000261318|SPRING1'] 10531 7966 CLHEFPGRTQ True H1975_Epitope_Rep3 1186.5553268716599 1186.5542299358601 35.613 2 -1.708291734765353 0.437222828872596 1.0 ['ENST00000568784.6_1_16:46722452-46722602:-|nuORF'] 88457 11178 QSRLM[Oxidation]M[Oxidation]EHF True H1975_Epitope_Rep2 1209.52706427937 1209.52596993586 48.035 2 -1.7084278506600288 0.43722422783794623 1.0 ['ENSG00000100426|ENST00000216268|ZBED4'] 95415 23961 RWFKFRKRKGE True PC9_epitope_Rep1 1536.8789843808797 1536.87733490379 96.971 3 -1.7085535277750423 0.43722422783794623 1.0 ['nc|ENSG00000164542|Q8NCT3|MATCAP2'] 125629 25280 VKKRKEKTA True PC9_epitope_Rep2 1086.6873270173799 1086.6862299358602 102.91 2 -1.7086194638099075 0.43722562674094706 1.0 ['ENSG00000124784|ENST00000379834|RIOK1'] 69513 24480 LVAWQDQEGVH True H1975_Epitope_Rep3 1280.6149499227602 1280.6138499358601 101.89 2 -1.7086391351046404 0.43722562674094706 1.0 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000578529.5_1_18:214628-260326:-|nuORF'] 25557 10133 FEISFGSL True H1975_Epitope_Rep3 898.4436340810199 898.44252993586 44.021 2 -1.7087020971348978 0.4372318971376363 1.0 ['ENST00000465481.5_1_6:31633906-31635902:+|nuORF'] 123612 20684 VGQGGGGK True PC9_epitope_Rep4 658.3398377188199 658.3392849679301 87.721 1 -1.708715647516752 0.4372346944459919 1.0 ['ENST00000589017.5_1_17:66507964-66511234:+|nuORF'] 16443 11294 EELDFQKN True H1975_Epitope_Rep2 1021.4716397340101 1021.47054993586 48.489 2 -1.7087970441861393 0.4372346944459919 1.0 ['LMNA|p.T510Yfs*42|1|0.54|ENSG00000160789|chr1:156137144-156137145|-/C|frameshift_variant', 'nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 92839 4676 RPDCWKRRKR True PC9_epitope_Rep2 1399.7731394133496 1399.77148490379 23.356 3 -1.70881259992046 0.4372346944459919 1.0 ['ENST00000316637.6_1_6:35287445-35287621:+|nuORF'] 117702 14870 TVTWIRLGL True PC9_epitope_Rep6 1057.6284151589298 1057.62730993586 69.174 2 -1.7088812485974219 0.4372346944459919 1.0 ['ENST00000361050.3_1_11:58977993-58978113:-|nuORF'] 74034 17166 NDKKILFRYSV True PC9_epitope_Rep3 1381.77178491733 1381.7706899358602 71.187 2 -1.7089178748584393 0.4372360930066736 1.0 ['ENSG00000118492|ENST00000397944|ADGB', 'nc|ENSG00000118492|Q8N7X0-2|ADGB'] 88077 25348 QRRKPLKNW True PC9_epitope_Rep2 1224.7203584811598 1224.7192699358602 103.18 2 -1.7089314257184962 0.4372360930066736 1.0 ['ENST00000367295.5_2_1:201750194-201750248:+|nuORF'] 131845 10777 VTQTPGREKSW True PC9_epitope_Rep4 1287.6571490879098 1287.6555149037902 49.213 3 -1.7091633040502388 0.43724236279774503 1.0 ['ENST00000595033.5_1_19:17862379-17873590:+|nuORF'] 94315 19022 RRRKKRRREEE True H1975_Epitope_Rep1 1597.93493611721 1597.93382993586 79.298 2 -1.7092841627349338 0.4372883244206774 1.0 ['ENST00000235307.6_1_1:184356289-184446531:+|nuORF'] 61786 20184 LLAPHMVP True PC9_epitope_Rep6 876.4891448048 876.48804993586 90.311 2 -1.7092932634358193 0.4372883244206774 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000149451|Q9BZ11-3|ADAM33'] 119270 25594 VALKPLGGL True PC9_epitope_Rep3 866.5589386167799 866.5583949679301 103.94 1 -1.7094335953767896 0.4373057341161529 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 56235 19434 LCLTVRFNLVI True NCI_RA007_Epitope_Rep5 1289.75296404905 1289.75131490379 81.64 3 -1.7096962635681212 0.4373565651389229 1.0 ['ENST00000373840.8_1_9:123943305-123943461:-|nuORF'] 4574 21567 AKPGGFGMG True PC9_epitope_Rep6 820.3901590395199 820.38906993586 95.834 2 -1.7097785537738912 0.43737397368626274 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 61662 21286 LKRRIWRMPLF True H1975_Epitope_Rep2 1514.9020283245798 1514.9003849037902 88.088 3 -1.7099623657756344 0.4373767862512948 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 116058 6938 TSPMTDRP True PC9_epitope_Rep3 903.4120166829099 903.41090993586 31.701 2 -1.7099632884617806 0.4373767862512948 1.0 ['HTRA1|p.E366Sfs*22|1|0.11|ENSG00000166033|chr10:122508745-122508745|G/-|frameshift_variant'] 38550 20622 HETGHVLG True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 86.264 2 -1.7100020637352695 0.4373767862512948 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 5634 8851 ANVLSYLRLFF True H1975_Epitope_Rep2 1341.74450754033 1341.74287490379 39.012 3 -1.7100067738305242 0.4373767862512948 1.0 ['nc|ENSG00000144935|P48995-2|TRPC1', 'ENSG00000144935|ENST00000476941|TRPC1'] 109241 5012 TARTPTPP True H1975_Epitope_Rep2 839.4501164437899 839.44900993586 24.361 2 -1.7100077705435683 0.4373767862512948 1.0 ['IRX4|p.F102Lfs*83|1|0.11|ENSG00000113430|chr5:1880829-1880829|G/-|frameshift_variant'] 97226 4559 SDYSFSVIAMS True PC9_epitope_Rep4 1205.52744035797 1205.52634993586 24.032 2 -1.7100185440072981 0.4373767862512948 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 100652 16234 SLDIQHVLDKL True H1975_Epitope_Rep1 1279.71360133487 1279.71307496793 67.793 1 -1.7102300041900191 0.4373767862512948 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 123533 10554 VGPPGEPGP True PC9_epitope_Rep3 805.39701824177 805.39592993586 45.544 2 -1.710280396046901 0.4373767862512948 1.0 ['COL5A3|p.G1340Rfs*9|1|0.33|ENSG00000080573|chr19:9969655-9969656|-/T|frameshift_variant', 'COL5A3|p.G1454Rfs*103|1|0.36|ENSG00000080573|chr19:9968035-9968036|-/G|frameshift_variant', 'COL5A3|p.W1600Gfs*29|1|0.16|ENSG00000080573|chr19:9962873-9962873|G/-|frameshift_variant', 'ENSG00000080573|ENST00000264828|COL5A3'] 89215 23748 QVTPPRKDAA True PC9_epitope_Rep4 1081.58800689893 1081.5869099358601 99.724 2 -1.7103057634737167 0.4373767862512948 1.0 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 43537 15873 IGPPGPIGPKG True PC9_epitope_Rep2 988.5705659296399 988.56946993586 66.312 2 -1.7103259015761207 0.4373767862512948 1.0 ['ENSG00000169031|ENST00000396578|COL4A3', 'nc|ENSG00000169031|Q01955-2|COL4A3', 'nc|ENSG00000169031|Q01955-5|COL4A3', 'nc|ENSG00000169031|Q01955-4|COL4A3', 'nc|ENSG00000169031|Q01955-3|COL4A3', 'ENST00000471862.1_1_2:228162448-228168961:+|nuORF'] 39764 5128 HLVSNEDP True H1975_Epitope_Rep1 909.41921023833 909.41810993586 24.794 2 -1.710404501261294 0.4373767862512948 1.0 ['PARP9|p.L655Afs*19|1|0.03|ENSG00000138496|chr3:122536982-122536983|-/GTTGGCTTTCAAAGAATGTACTCGACACCTTGCG|frameshift_variant', 'nc|ENSG00000138496|Q8IXQ6-3|PARP9', 'PARP9|p.Q816Mfs*23|1|0.05|ENSG00000138496|chr3:122528484-122528485|-/CCATC|frameshift_variant', 'ENSG00000138496|ENST00000682323|PARP9', 'nc|ENSG00000138496|Q8IXQ6|PARP9'] 43256 15740 IFPLLPTP True PC9_epitope_Rep3 896.53714054304 896.53604993586 65.7 2 -1.7104481271181364 0.4373767862512948 1.0 ['ENST00000486433.5_1_12:56865273-56869736:-|nuORF'] 91325 18313 RGRRHRLQYR True NCI_RA007_Epitope_Rep4 1396.80246539568 1396.80082490379 79.222 3 -1.7104919693091518 0.4373767862512948 1.0 ['ENSG00000105278|ENST00000262961|ZFR2'] 62308 12017 LLGAPQRGAL True PC9_epitope_Rep6 994.5923640033799 994.5912699358599 57.511 2 -1.7105180541796685 0.4373767862512948 1.0 ['ENST00000597346.1_1_11:2720561-2721134:-|nuORF'] 47365 24671 IVHRRIINRF True H1975_Epitope_Rep2 1322.8047568114596 1322.8036499358602 101.46 2 -1.710530110783482 0.4373767862512948 1.0 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3'] 128441 21090 VPRYQKFP True PC9_epitope_Rep1 1033.5709002828098 1033.5703749679299 85.952 1 -1.7105469925033332 0.4373767862512948 1.0 ['nc|ENSG00000110697|O00562-2|PITPNM1', 'ENSG00000110697|ENST00000356404|PITPNM1', 'ENST00000527370.5_1_11:67259506-67263940:-|nuORF'] 56708 20786 LDLCHTTS True H1975_Epitope_Rep1 888.4011176460401 888.40002993586 86.377 2 -1.7105756809852868 0.4373767862512948 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 75951 12678 NLSYDERSI True PC9_epitope_Rep5 1095.51965255559 1095.5185499358602 53.772 2 -1.7107576794333719 0.4373767862512948 1.0 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'ENST00000540438.5_1_11:113669964-113691034:-|nuORF'] 59609 7524 LFWLIMTRKWN True NCI_RA007_Epitope_Rep2 1506.8169612879396 1506.81532490379 33.893 3 -1.7107622229458654 0.4373767862512948 1.0 ['ENST00000450169.6_1_7:32526725-32526845:-|nuORF'] 4799 19982 ALEASHRSRPK True NCI_RA007_Epitope_Rep2 1250.68436689526 1250.6827349037899 82.727 3 -1.7107803644255088 0.4373767862512948 1.0 ['nc|ENSG00000091622|Q9BZ71-2|PITPNM3', 'nc|ENSG00000091622|Q9BZ71-3|PITPNM3', 'ENSG00000091622|ENST00000262483|PITPNM3'] 112151 9184 TIYYGEQR True H1975_Epitope_Rep1 1028.4927095317598 1028.4916099358602 40.233 2 -1.7107964612130846 0.43738305265971666 1.0 ['ENSG00000127083|ENST00000375550|OMD'] 27629 11419 FPATGSSY True H1975_Epitope_Rep3 828.3653837603199 828.36483496793 49.04 1 -1.7108414102706606 0.4373969795518332 1.0 ['ENST00000320241.4_1_16:86613413-86613659:+|nuORF'] 62703 17629 LLLLVPLIKPA True H1975_Epitope_Rep2 1188.82096695588 1188.8193149037902 73.126 3 -1.7110775453204032 0.4373969795518332 1.0 ['ENSG00000106809|ENST00000375561|OGN'] 133118 11541 VVQNGPTA True NCI_RA007_Epitope_Rep5 784.40791727864 784.40682993586 51.042 2 -1.7110894855237588 0.4373969795518332 1.0 ['ENST00000524591.6_1_8:12878711-12878915:+|nuORF'] 55439 16399 LAFHPHGA True H1975_Epitope_Rep2 848.42932142956 848.42822993586 68.299 2 -1.7111239272527696 0.4373969795518332 1.0 ['ENST00000368457.2_1_1:154930914-154931193:-|nuORF'] 140097 19029 YQLQKKRR True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.6661699358601 80.051 2 -1.7113368316797095 0.43743178527675686 1.0 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 133056 26167 VVPQLKYKV True PC9_epitope_Rep3 1072.6644663144798 1072.6633699358601 106.68 2 -1.711365156892969 0.43743178527675686 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 80930 20324 PIDDTVEG True H1975_Epitope_Rep2 844.38142774728 844.38032993586 84.222 2 -1.711408641464558 0.43743805058413426 1.0 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 130257 19513 VSGEIRMP True PC9_epitope_Rep4 887.4534875720699 887.4529349679301 83.176 1 -1.7115409133128727 0.437450580780239 1.0 ['nc|ENSG00000160325|Q9UGQ2-3|CACFD1', 'nc|ENSG00000160325|Q9UGQ2-4|CACFD1'] 139889 8470 YPSRSSSGL True PC9_epitope_Rep5 952.4614094034799 952.46030993586 37.522 2 -1.7116702200513476 0.437450580780239 1.0 ['ENST00000563829.5_1_15:75145788-75146232:-|nuORF'] 14814 23001 DVRPLYSRR True PC9_epitope_Rep2 1160.64143945412 1160.64034993586 93.967 2 -1.7120195591479461 0.43749930400115816 1.0 ['ENSG00000185010|ENST00000360256|F8'] 96675 24020 SAKKPCPV True PC9_epitope_Rep3 828.4527592960799 828.45166993586 97.679 2 -1.7120267151885002 0.43749930400115816 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 39339 16326 HKAHACIM True NCI_RA007_Epitope_Rep4 909.43131265885 909.43020993586 70.794 2 -1.7120579277419516 0.43749930400115816 1.0 ['ENST00000464678.5_1_22:51208306-51220722:-|nuORF', 'nc|ENSG00000144134|Q9UNT1|RABL2B', 'ENSG00000079974|ENST00000691320|RABL2B', 'nc|ENSG00000144134|Q9UNT1-3|RABL2B', 'ENST00000477218.1_1_2:114392665-114398608:+|nuORF', 'ENST00000465711.5_1_2:114386183-114394926:+|nuORF', 'nc|ENSG00000144134|Q9UBK7|RABL2A', 'ENSG00000144134|ENST00000683472|RABL2A', 'nc|ENSG00000144134|Q9UBK7-3|RABL2A'] 120258 6636 VEDAKGLR True NCI_RA007_Epitope_Rep4 886.4872302284998 886.48668496793 32.15 1 -1.7120808639314284 0.43749930400115816 1.0 ['ENST00000477440.6_1_3:56992911-57112628:-|nuORF'] 107520 7231 SVPAARDR True PC9_epitope_Rep2 870.46716349026 870.46606993586 33.203 2 -1.7121267629327677 0.43749930400115816 1.0 ['ENST00000265626.8_3_20:56227391-56286474:-|nuORF', 'ENST00000341744.7_2_20:56227391-56284786:-|nuORF'] 43210 24585 IFIPKQKPVQ True NCI_RA007_Epitope_Rep5 1196.7281292001999 1196.7270299358602 102.04 2 -1.7121328220007108 0.43749930400115816 1.0 ['ENSG00000138594|ENST00000308580|TMOD3'] 124654 22131 VGYARILF True PC9_epitope_Rep3 937.5385375253699 937.53744993586 90.425 2 -1.7122576928559554 0.4375194868825442 1.0 ['nc|ENSG00000049239|O95479-2|H6PD', 'ENSG00000049239|ENST00000377403|H6PD', 'H6PD|p.N375I|1|0.1|ENSG00000049239|chr1:9263617-9263617|A/T|missense_variant'] 57001 8883 LDRIDSVL True H1975_Epitope_Rep3 929.51819600361 929.51708993586 39.169 2 -1.7122685645078948 0.4375194868825442 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A', 'MAP1A|p.P2045Qfs*25|1|0.13|ENSG00000166963|chr15:43527603-43527603|C/-|frameshift_variant', 'MAP1A|p.P2423Tfs*7|1|0.25|ENSG00000166963|chr15:43528730-43528731|-/G|frameshift_variant'] 61717 24187 LLAALTAYK True PC9_epitope_Rep4 962.5800679841799 962.57896993586 101.51 2 -1.7123266461793258 0.4375194868825442 1.0 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'ENST00000496816.5_1_20:62325699-62327208:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-5|RTEL1', 'ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 124076 15358 VGSLPKAI True NCI_RA007_Epitope_Rep5 783.48543932335 783.48489496793 65.781 1 -1.7123815138849647 0.4375194868825442 1.0 ['ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 20627 18809 EPVIKLENR True NCI_RA007_Epitope_Rep1 1096.62405805448 1096.62347496793 77.307 1 -1.7124232875974423 0.4375194868825442 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 38556 24596 HETGHVLG True PC9_epitope_Rep5 848.41406528824 848.41296993586 99.724 2 -1.7124863539087258 0.4375208783377503 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 82200 20992 PNYLTQQWQRL True NCI_RA007_Epitope_Rep1 1445.7415474182098 1445.7404499358602 85.908 2 -1.712515630698168 0.4375208783377503 1.0 ['ENST00000512760.5_1_4:79841695-79860421:-|nuORF', 'ENSG00000163291|ENST00000512733|PAQR3', 'nc|ENSG00000163291|Q6TCH7-3|PAQR3', 'nc|ENSG00000163291|Q6TCH7-2|PAQR3'] 84428 5236 QAEHRRWEHWW True H1975_Epitope_Rep1 1619.7494267633099 1619.74832993586 25.203 2 -1.712539760714081 0.43752714153685124 1.0 ['ENST00000398117.1_1_18:60791148-60791340:-|nuORF'] 115100 7916 TRDEQEIEFL True PC9_epitope_Rep1 1278.6091958359798 1278.6075449037899 35.274 3 -1.7125626035868673 0.4375347956797684 1.0 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1'] 126707 10063 VLPGGNLG True NCI_RA007_Epitope_Rep4 725.40718900265 725.4066449679301 45.553 1 -1.7125633990171119 0.4375347956797684 1.0 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000497113.1_1_1:8022845-8031696:+|nuORF', 'ENST00000465354.5_1_1:8022845-8031070:+|nuORF', 'ENST00000460192.5_1_1:8025453-8031070:+|nuORF', 'ENST00000547655.1_1_12:49989013-49989364:+|nuORF'] 60788 23325 LHSLAHGP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 96.186 2 -1.7125737094324038 0.4375347956797684 1.0 ['nc|ENSG00000175600|Q9HAC7-2|SUGCT', 'nc|ENSG00000175600|Q9HAC7-3|SUGCT'] 19059 13024 ELFQYISRYTP True H1975_Epitope_Rep3 1415.70851595443 1415.7074099358601 55.334 2 -1.7127929008079201 0.43758559641914685 1.0 ['nc|ENSG00000118096|Q9NQC8-2|IFT46', 'ENSG00000118096|ENST00000264021|IFT46', 'ENST00000531201.5_1_11:118415633-118427808:-|nuORF'] 15238 14333 EAEKLVTYY True H1975_Epitope_Rep3 1114.55464108198 1114.5540749679299 60.479 1 -1.7129900193843062 0.43760925478494206 1.0 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8'] 8741 15662 AVCCEDHI True PC9_epitope_Rep3 888.3469738981998 888.34586993586 65.389 2 -1.7129909304199673 0.43760925478494206 1.0 ['nc|ENSG00000030582|P28799-3|GRN', 'nc|ENSG00000030582|P28799-2|GRN', 'ENSG00000030582|ENST00000053867|GRN'] 12870 8650 DLHSKNKD True PC9_epitope_Rep5 955.47230844035 955.47120993586 38.216 2 -1.713075154764577 0.4376155165119024 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'MAP2|p.E1172*|1|0.31|ENSG00000078018|chr2:209695683-209695684|-/T|frameshift_variant', 'MAP2|p.I1173Yfs*12|1|0.41|ENSG00000078018|chr2:209695685-209695685|A/-|frameshift_variant', 'MAP2|p.R671K|1|0.29|ENSG00000078018|chr2:209694182-209694182|G/A|missense_variant'] 130634 13346 VSSWVSERA True PC9_epitope_Rep2 1019.5036085686299 1019.50250993586 56.609 2 -1.7132358130672671 0.4376391734212167 1.0 ['ENST00000274026.9_1_4:122744913-122744994:-|nuORF'] 26774 10910 FKKPTYCNF True NCI_RA007_Epitope_Rep4 1146.55320161334 1146.5515649037902 48.826 3 -1.7132470092893468 0.4376391734212167 1.0 ['ENST00000480809.5_1_3:185925300-186038248:-|nuORF', 'nc|ENSG00000058866|P49619-3|DGKG', 'nc|ENSG00000058866|P49619-2|DGKG', 'ENSG00000058866|ENST00000265022|DGKG'] 2971 22812 AFFTLLKII True PC9_epitope_Rep5 1064.66340368532 1064.66230993586 92.739 2 -1.7133278395777607 0.43765656835565653 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|2.1672232902095696|0.3234029913481031|2.74|541.0|38|2|anti-sense'] 122272 12453 VGASWGSLAPG True NCI_RA007_Epitope_Rep3 1000.4977949121999 1000.49668993586 56.204 2 -1.7133517244472465 0.43766282927698236 1.0 ['ENST00000221566.6_1_19:2754860-2755205:-|nuORF'] 3005 15866 AFKLKEIA True PC9_epitope_Rep6 918.5538532363398 918.55274993586 73.303 2 -1.713723713755419 0.43772475756799784 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENST00000555301.1_1_14:21862382-21863168:-|nuORF'] 126670 20149 VLNWTVELK True NCI_RA007_Epitope_Rep5 1100.62299542532 1100.62188993586 84.448 2 -1.7138075201455532 0.437731017590737 1.0 ['ENST00000226299.8_1_4:17609204-17609297:+|nuORF'] 29579 24643 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 102.53 3 -1.713871984015354 0.43773866381661714 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 64282 23958 LPISGHPT True NCI_RA007_Epitope_Rep5 820.44430278736 820.44320993586 99.531 2 -1.7138960293943295 0.43773866381661714 1.0 ['ENST00000497655.1_1_1:202932056-202932895:-|nuORF'] 41880 22053 ICGRKKCLRH True PC9_epitope_Rep6 1212.6695858616 1212.6690749679299 97.761 1 -1.7139113991658903 0.43773866381661714 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000554514.1_1_14:21549058-21555515:+|nuORF', 'ENST00000555232.5_1_14:21549679-21554039:+|nuORF'] 81877 13617 PLRLNNTSQ True NCI_RA007_Epitope_Rep5 1041.55670677065 1041.55560993586 59.063 2 -1.714006733833023 0.4377400500974116 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 77915 23326 NVILFMSVRVL True PC9_epitope_Rep3 1289.7529640490502 1289.7518699358602 95.003 2 -1.7140694033570734 0.4377400500974116 1.0 ['ENST00000356921.6_1_14:70633434-70633566:-|nuORF'] 137007 7414 YAKVQGAV True NCI_RA007_Epitope_Rep3 834.4599528514998 834.45884993586 36.287 2 -1.7140989527737822 0.437741436316475 1.0 ['ENST00000484301.5_2_1:47042245-47048513:-|nuORF', 'ENST00000474868.1_2_1:47046162-47051597:-|nuORF', 'ENST00000480531.5_2_1:47042245-47051597:-|nuORF', 'ENST00000342571.7_2_1:47037799-47051597:-|nuORF', 'ENST00000486716.5_2_1:47040607-47059818:-|nuORF', 'nc|ENSG00000079277|Q9BUB5-3|MKNK1', 'ENSG00000079277|ENST00000371945|MKNK1', 'nc|ENSG00000079277|Q9BUB5-2|MKNK1', 'nc|ENSG00000079277|Q9BUB5|MKNK1'] 56709 14874 LDLCHTTS True H1975_Epitope_Rep2 888.4011176460401 888.40002993586 62.364 2 -1.7141465762011503 0.437741436316475 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 18957 12533 ELEKLRQDFE True PC9_epitope_Rep1 1305.6564803815697 1305.65538993586 53.079 2 -1.7142382426813623 0.43775395473622103 1.0 ['ENSG00000155827|ENST00000389120|RNF20', 'RNF20|p.Q440Sfs*14|1|0.08|ENSG00000155827|chr9:101551726-101551727|-/T|frameshift_variant'] 57270 11466 LDYIYRVL True PC9_epitope_Rep1 1053.58588164061 1053.58478993586 48.985 2 -1.7143483117651406 0.43775395473622103 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 86570 9053 QLDVSHTLQ True PC9_epitope_Rep5 1039.52982331647 1039.5287299358602 39.767 2 -1.7144016248044052 0.43775534058398546 1.0 ['ENSG00000214946|ENST00000437605|TBC1D26', 'nc|ENSG00000214946|Q86UD7-2|TBC1D26', 'ENSG00000189375|ENST00000405044|TBC1D28', 'nc|ENSG00000214946|Q86UD7|TBC1D26'] 136415 10288 WTWEDSSA True NCI_RA007_Epitope_Rep5 980.3875757568799 980.38646993586 46.202 2 -1.7144139093877606 0.43775534058398546 1.0 ['ENST00000474787.1_1_9:139974763-139976621:+|nuORF'] 95531 23655 RWRLPLTCLLL True PC9_epitope_Rep5 1382.82204666838 1382.8204049037902 95.969 3 -1.7145345720697562 0.4377567263700422 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 54604 9012 KYKSSLLNRY True H1975_Epitope_Rep3 1270.70337100434 1270.7022699358602 39.66 2 -1.7145434592775153 0.4377567263700422 1.0 ['ENSG00000150051|ENST00000419761|MKX'] 49219 17298 KENLGWQKL True PC9_epitope_Rep2 1114.61349337078 1114.6123899358602 71.795 2 -1.7148463814970678 0.43778314540455704 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'nc|ENSG00000096696|P15924-3|DSP'] 538 11450 AAPPQTHE True NCI_RA007_Epitope_Rep5 849.3980808709299 849.39753496793 50.691 1 -1.7148891087185076 0.43778314540455704 1.0 ['ENST00000348165.9_1_7:157060445-157060553:+|nuORF'] 112422 10208 TLDAAISK True H1975_Epitope_Rep2 817.45453311789 817.45342993586 44.27 2 -1.7150042518085633 0.43778314540455704 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'UBR4|p.K2130Nfs*41|1|0.13|ENSG00000127481|chr1:19154986-19154986|T/-|frameshift_variant', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'UBR4|p.H1149Ifs*136|1|0.18|ENSG00000127481|chr1:19172940-19172940|G/-|frameshift_variant', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 122019 24165 VFVLPFPV True PC9_epitope_Rep4 916.5422259234799 916.54112993586 101.42 2 -1.7150375000045786 0.43778314540455704 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 5762 22417 APASTKQA True PC9_epitope_Rep3 772.40791727864 772.4073649679301 91.504 1 -1.7150606560666795 0.43778314540455704 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000540626.5_1_11:71714575-71718510:-|nuORF'] 30017 20428 FYDGIKAILQ True PC9_epitope_Rep1 1166.6335601090198 1166.6324699358602 83.389 2 -1.715130084499016 0.43778314540455704 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B'] 29071 17335 FTHRINIPRR True NCI_RA007_Epitope_Rep3 1308.7527212385999 1308.7516299358601 76.07 2 -1.7152591455715864 0.43780053428317006 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 122198 6900 VGALRALH True NCI_RA007_Epitope_Rep4 835.50282072299 835.50172993586 33.158 2 -1.7153294352678385 0.4378081764856472 1.0 ['ENST00000605573.1_1_3:187871072-187871573:-|nuORF'] 139771 26674 YPEYLSNFP True PC9_epitope_Rep3 1128.51277627 1128.51112490379 109.23 3 -1.7154477358710032 0.4378081764856472 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 124034 15168 VGSGQGPQ True NCI_RA007_Epitope_Rep3 728.34531702208 728.34476496793 67.182 1 -1.7154537578836266 0.4378081764856472 1.0 ['ENST00000435221.6_1_1:2487266-2487602:+|nuORF'] 81246 24769 PKKPGVGV True NCI_RA007_Epitope_Rep5 780.4857736765199 780.4852249679301 102.76 1 -1.7156183032178998 0.43781443390766217 1.0 ['nc|ENSG00000275066|Q9UMZ2-6|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-9|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-4|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-8|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-3|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-7|SYNRG'] 62903 21805 LLNRFILL True PC9_epitope_Rep5 1000.6433369470799 1000.64222993586 88.906 2 -1.7156555472080628 0.4378206911903834 1.0 ['ENSG00000125170|ENST00000340099|DOK4'] 129418 24511 VRFQERRP True PC9_epitope_Rep3 1086.60466002258 1086.6035699358602 99.625 2 -1.7157494543156453 0.4378492086459052 1.0 ['ENST00000477267.1_1_10:102824694-102827451:+|nuORF', 'ENST00000465807.1_1_10:102826065-102827451:+|nuORF'] 906 11069 ADLRAHRRT True H1975_Epitope_Rep1 1094.6057226517398 1094.6046299358602 47.54 2 -1.715795942940082 0.4378519755147468 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 50015 25047 KKAAKPSVPK True PC9_epitope_Rep1 1052.67061432408 1052.66950993586 101.26 2 -1.715833625729393 0.4378519755147468 1.0 ['ENSG00000184897|ENST00000333762|H1-10'] 62794 21902 LLLTTDYFPD True PC9_epitope_Rep6 1196.59650589396 1196.59540993586 97.149 2 -1.715838050918536 0.4378519755147468 1.0 ['DEPDC5|p.P754L|1|0.2|ENSG00000100150|chr22:31837062-31837062|C/T|missense_variant'] 27038 20598 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 86.172 2 -1.7159795993017066 0.4378519755147468 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 72535 6319 MLKQMLFRYQ True NCI_RA007_Epitope_Rep4 1356.70463395764 1356.70297490379 30.91 3 -1.7160321708520336 0.43785823196180346 1.0 ['ENSG00000136930|ENST00000259457|PSMB7'] 109521 8204 TDQFTITMW True H1975_Epitope_Rep1 1141.5113963710098 1141.51028993586 36.499 2 -1.716226203783609 0.4378700200311596 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant'] 49220 12801 KENLRFISTKL True NCI_RA007_Epitope_Rep1 1347.78743498147 1347.78632993586 53.78 2 -1.7163351938319946 0.4378700200311596 1.0 ['AKAP8|p.T417N|1|0.42|ENSG00000105127|chr19:15362162-15362162|G/T|missense_variant'] 30507 14286 GAGGKGRH True H1975_Epitope_Rep1 738.3885192467401 738.3879749679301 60.137 1 -1.7163397880415479 0.4378700200311596 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ENST00000488316.1_1_20:62290002-62290707:+|nuORF'] 136357 26820 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 111.75 2 -1.7164524866782187 0.4378700200311596 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 118188 19131 TYKADYLPWN True PC9_epitope_Rep3 1269.6029882567298 1269.60188993586 78.809 2 -1.7164738040732257 0.4378700200311596 1.0 ['ENSG00000155875|ENST00000380534|SAXO1'] 139043 18978 YLAPHVRTLYT True NCI_RA007_Epitope_Rep3 1332.71902106848 1332.7173749037902 82.934 3 -1.7164757809410793 0.4378700200311596 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1'] 63793 4560 LNFWWLKRTL True PC9_epitope_Rep1 1375.7764763749497 1375.7748449037902 22.417 3 -1.7164915848392204 0.4378700200311596 1.0 ['ENST00000367166.4_1_6:155619688-155632440:-|nuORF'] 142469 22496 YYHISSSA True PC9_epitope_Rep6 926.4133965819 926.41228993586 99.53 2 -1.7165645832946839 0.4378700200311596 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 63174 19922 LLRRPLYR True PC9_epitope_Rep4 1085.68218206729 1085.6810899358602 84.764 2 -1.7165786724059438 0.4378700200311596 1.0 ['ENSG00000188505|ENST00000339852|NCCRP1'] 93384 25006 RQAMKKVL True PC9_epitope_Rep3 972.5902558283999 972.58914993586 101.53 2 -1.7167723062828093 0.4378985321774741 1.0 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2', 'DNA2|p.G653Vfs*4|1|0.1|ENSG00000138346|chr10:68431869-68431887|CATATCGTAGTTGTTTTTC/-|frameshift_variant', 'nc|ENSG00000138346|P51530-2|DNA2'] 27304 24889 FLRKKQVF True NCI_RA007_Epitope_Rep1 1064.6494849566798 1064.6483899358602 103.02 2 -1.7170025816658252 0.43792842517582126 1.0 ['ENST00000473805.5_1_1:52281970-52293513:-|nuORF'] 124578 11981 VGVSKVLV True PC9_epitope_Rep4 799.5167394516299 799.51564993586 53.878 2 -1.7170090861042395 0.43792842517582126 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1|p.D2165Afs*127|1|0.2|ENSG00000165671|chr5:177293860-177293866|TGACATC/-|frameshift_variant', 'NSD1|p.V1627Afs*11|1|0.04|ENSG00000165671|chr5:177257065-177257093|TTATGCAGAACAAGGGCTTCCGGTGCTCC/-|frameshift_variant'] 20102 11631 EMLSLEGAMDS True PC9_epitope_Rep1 1181.49442597753 1181.4933299358602 49.618 2 -1.7170389158225203 0.43792842517582126 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant'] 49326 11654 KERQEQRQRHE True NCI_RA007_Epitope_Rep2 1522.7712844066998 1522.7701899358601 49.924 2 -1.717089856757378 0.4379436964504284 1.0 ['ENST00000394009.4_1_14:74486078-74489636:+|nuORF'] 49171 24601 KELMLLIIAGF True H1975_Epitope_Rep2 1246.73591700258 1246.73480993586 101.18 2 -1.717307149200545 0.4379436964504284 1.0 ['nc|ENSG00000272987|P0C617|OR5AL1'] 121963 10393 VFTMIDIF True PC9_epitope_Rep2 984.4990407821599 984.49794993586 45.299 2 -1.7173257469604886 0.4379436964504284 1.0 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A'] 114429 21077 TPTTRRRRTQR True PC9_epitope_Rep2 1427.8181750294698 1427.8170699358602 86.53 2 -1.7173569534511663 0.4379436964504284 1.0 ['ENST00000339093.7_1_19:50063260-50063938:-|nuORF'] 14982 13932 DYGPFRDVP True H1975_Epitope_Rep1 1064.49270953176 1064.4916099358602 58.744 2 -1.7174271588103336 0.4379436964504284 1.0 ['ENSG00000163902|ENST00000296255|RPN1'] 133394 12959 VVVLLSAE True NCI_RA007_Epitope_Rep4 828.49566965388 828.49456993586 56.941 2 -1.717481148988105 0.4379436964504284 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant'] 67067 5959 LSQASTDPK True NCI_RA007_Epitope_Rep2 945.4767251144499 945.47562993586 27.789 2 -1.7176210740348887 0.43796107754448044 1.0 ['nc|ENSG00000166863|Q9UHF0-3|TAC3', 'ENSG00000166863|ENST00000458521|TAC3', 'nc|ENSG00000166863|Q9UHF0-2|TAC3'] 26928 24713 FLDMVHSLLL True PC9_epitope_Rep4 1186.64201661774 1186.64090993586 103.55 2 -1.7180781613864204 0.437970740390499 1.0 ['ENSG00000277535|ENST00000620151|CT47C1'] 44855 8183 INGLLGNIV True PC9_epitope_Rep1 911.54401682863 911.54290993586 36.309 2 -1.718126574019535 0.437970740390499 1.0 ['nc|ENSG00000217128|Q8TF40-3|FNIP1'] 59523 14251 LFRWEQDEIPR True PC9_epitope_Rep6 1487.75211210191 1487.75100993586 66.707 2 -1.7181365239461197 0.437970740390499 1.0 ['ENST00000460981.1_1_6:111714035-111726820:-|nuORF'] 81770 24225 PLPLKKKQKQ True PC9_epitope_Rep4 1206.78122740222 1206.77959490379 101.66 3 -1.7181389393512025 0.437970740390499 1.0 ['ENST00000250111.8_1_17:7560666-7560732:+|nuORF'] 131737 9214 VTPKALEDFLR True PC9_epitope_Rep5 1287.71868671531 1287.71704490379 40.387 3 -1.7181486948310463 0.437970740390499 1.0 ['OR2AG1|p.A83E|1|0.35|ENSG00000279486|chr11:6785285-6785285|C/A|missense_variant'] 16418 16627 EEKKRKREREH True NCI_RA007_Epitope_Rep1 1523.8280710068298 1523.82696993586 68.794 2 -1.7181504175808928 0.437970740390499 1.0 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000487688.1_1_5:889867-892539:-|nuORF', 'ENST00000466684.5_1_5:889867-892639:-|nuORF', 'ENST00000495265.5_1_5:889867-892820:-|nuORF', 'ENST00000483173.5_3_5:889166-892639:-|nuORF', 'BRD9|p.E194Sfs*5|1|0.35|ENSG00000028310|chr5:889038-889048|ACTTGTATTCA/-|frameshift_variant'] 94932 8991 RTFWYWNYNYY True PC9_epitope_Rep3 1674.7255630008997 1674.72391490379 39.528 3 -1.7182505062110387 0.437970740390499 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 83448 23741 PTPHCSHS True H1975_Epitope_Rep2 864.3548361599601 864.35372993586 97.82 2 -1.7182549236728057 0.437970740390499 1.0 ['ENST00000360535.8_1_19:36523251-36523727:-|nuORF'] 119273 23403 VALKPLGGL True PC9_epitope_Rep6 866.5589386167799 866.5583949679301 103.12 1 -1.7183306800514182 0.437970740390499 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 11132 17444 DDEVSFSQL True PC9_epitope_Rep6 1038.4505699362599 1038.4494699358602 79.715 2 -1.7184442297811493 0.437970740390499 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 56294 9319 LDALSPFLR True H1975_Epitope_Rep1 1030.5811306133398 1030.58002993586 40.753 2 -1.7184645132774625 0.437970740390499 1.0 ['ENSG00000167566|ENST00000335999|NCKAP5L', 'nc|ENSG00000167566|Q9HCH0-2|NCKAP5L', 'NCKAP5L|p.I725Yfs*12|1|0.39|ENSG00000167566|chr12:49795688-49795688|C/-|frameshift_variant'] 38551 20719 HETGHVLG True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 86.666 2 -1.7184791961860042 0.437970740390499 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 92624 23587 RNCIPIGE True NCI_RA007_Epitope_Rep5 900.4487365447999 900.44762993586 98.045 2 -1.7185073405811093 0.437970740390499 1.0 ['ENSG00000119965|ENST00000481909|C10orf88'] 19400 11319 ELLVYYPPPSA True NCI_RA007_Epitope_Rep2 1247.64379043955 1247.64268993586 48.618 2 -1.7185471204164406 0.437970740390499 1.0 ['nc|ENSG00000176834|Q8N0Z9-2|VSIG10', 'ENSG00000176834|ENST00000359236|VSIG10'] 88099 18227 QRRRRRQVQ True NCI_RA007_Epitope_Rep5 1281.7602662305299 1281.75862490379 76.918 3 -1.7185944800781505 0.4379769930801237 1.0 ['CCDC120|p.R431Efs*203|1|0.25|ENSG00000147144|chrX:49067508-49067508|C/-|frameshift_variant', 'ENSG00000147144|ENST00000603986|CCDC120', 'nc|ENSG00000147144|Q96HB5-2|CCDC120', 'nc|ENSG00000147144|Q96HB5|CCDC120', 'nc|ENSG00000147144|Q96HB5-5|CCDC120', 'nc|ENSG00000147144|Q96HB5-3|CCDC120', 'ENST00000603906.1_1_X:48916566-48926191:+|nuORF'] 43991 24743 IIFIKLNL True H1975_Epitope_Rep3 972.6371889374799 972.63608993586 102.91 2 -1.7186580308878552 0.4379797530314829 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 12848 7519 DLGTRTDLKL True PC9_epitope_Rep2 1130.62953735774 1130.62844993586 34.289 2 -1.718746830389793 0.4379797530314829 1.0 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67917377-67917635:+|nuORF'] 14721 14344 DVLSGVVP True PC9_epitope_Rep2 784.43306939732 784.43196993586 60.437 2 -1.7187930097078503 0.4379797530314829 1.0 ['ENST00000209873.8_1_12:53715193-53715361:-|nuORF'] 37925 15674 GYSLKATT True PC9_epitope_Rep4 839.43888305375 839.43778993586 68.217 2 -1.7187956072401886 0.4379797530314829 1.0 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 91628 24014 RIPRPLRAHPG True PC9_epitope_Rep2 1268.7578066190397 1268.75670993586 97.865 2 -1.7194590560402276 0.43804787967783565 1.0 ['ENST00000380094.9_1_10:5931597-5931837:-|nuORF'] 91701 3385 RKAPKKKLPQK True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 17.766 3 -1.719525813009163 0.43804787967783565 1.0 ['ENST00000483741.1_1_1:44684093-44685454:+|nuORF', 'ENSG00000178028|ENST00000372289|DMAP1'] 98466 23521 SFHSLPET True NCI_RA007_Epitope_Rep5 916.42904664604 916.4279499358599 97.787 2 -1.7196580043942062 0.4380652553591492 1.0 ['TLR2|p.M428L|1|0.26|ENSG00000137462|chr4:153704189-153704189|A/C|missense_variant'] 46422 4349 ISSSNLYP True NCI_RA007_Epitope_Rep5 879.43379767331 879.43270993586 23.339 2 -1.719708328172277 0.43806663329439904 1.0 ['ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 93933 23271 RRGRGRPPQK True PC9_epitope_Rep5 1206.71700443622 1206.71590993586 94.498 2 -1.7197287355677038 0.43806663329439904 1.0 ['ENSG00000186280|ENST00000335080|KDM4D'] 29584 25285 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 104.62 3 -1.7198590132249125 0.4380728842217674 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 59456 16118 LFPVPPGV True PC9_epitope_Rep1 824.4796256669199 824.47852993586 66.814 2 -1.719912728122867 0.43807913501006707 1.0 ['ENST00000357681.9_1_1:203711927-203711975:+|nuORF'] 119274 23569 VALKPLGGL True PC9_epitope_Rep6 866.5589386167799 866.5583949679301 103.81 1 -1.7199500359535977 0.4380853856593028 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 46305 12912 ISQFRNDFRQY True H1975_Epitope_Rep3 1472.71606094636 1472.7149699358602 54.893 2 -1.7199588298779473 0.4380867630700779 1.0 ['ENST00000566049.5_1_16:19078961-19089477:+|nuORF'] 25871 6996 FFIYLYQRWIY True H1975_Epitope_Rep1 1610.82857151746 1610.8269149037899 31.947 3 -1.7199935950122336 0.4380867630700779 1.0 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 125723 24429 VKRLWLALARR True NCI_RA007_Epitope_Rep1 1380.8830071321597 1380.8819099358602 101.22 2 -1.7200583372862286 0.4380930134258796 1.0 ['ENST00000371025.7_1_20:57876485-57899387:+|nuORF', 'ENST00000395654.3_1_20:57876485-57899419:+|nuORF', 'ENST00000311585.11_1_20:57876485-57897473:+|nuORF'] 120970 5586 VEPHSPSPSSK True PC9_epitope_Rep6 1150.56185172074 1150.56074993586 29.533 2 -1.7202848231200045 0.43818337541572583 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 113696 18572 TLYKLHDRL True PC9_epitope_Rep1 1157.6556925359298 1157.65458993586 76.224 2 -1.7203196247168069 0.43818337541572583 1.0 ['ENSG00000174106|ENST00000308330|LEMD3'] 39590 23211 HLKFFIETT True PC9_epitope_Rep6 1134.60734536118 1134.60568490379 102.38 3 -1.7204179038552152 0.43821187043958 1.0 ['ENST00000504667.2_1_4:77272191-77272945:-|nuORF'] 29172 8473 FTQKLRSP True PC9_epitope_Rep5 975.5501648382299 975.54906993586 37.534 2 -1.7204966161738082 0.4382243676729028 1.0 ['ENST00000373883.3_1_2:220408769-220409425:+|nuORF', 'ENST00000421791.1_3_2:220408769-220409493:+|nuORF', 'ENST00000344458.6_1_2:220408458-220409493:+|nuORF'] 6203 22883 APPAHRAAA True PC9_epitope_Rep3 860.4616841869998 860.46058993586 93.285 2 -1.7205027919306874 0.4382243676729028 1.0 ['SSTR5|p.T347A|1|0.09|ENSG00000162009|chr16:1079907-1079907|A/G|missense_variant'] 30489 14530 GAGCALRH True H1975_Epitope_Rep1 783.3809913381501 783.3804449679301 61.094 1 -1.7206222152455597 0.4382444862141451 1.0 ['PHRF1|p.S867Pfs*46|1|0.14|ENSG00000070047|chr11:608054-608064|CAGCCCGAAGG/-|frameshift_variant'] 42719 20703 IEKSIIFNQ True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 87.795 2 -1.7207085556004098 0.4382444862141451 1.0 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.P1892Lfs*5|1|0.23|ENSG00000104237|chr8:54629556-54629556|C/-|frameshift_variant', 'RP1|p.T860Lfs*5|1|0.15|ENSG00000104237|chr8:54626458-54626459|-/ACTTTTGCAA|frameshift_variant', 'RP1|p.G329V|1|0.23|ENSG00000104237|chr8:54624868-54624868|G/T|missense_variant', 'RP1|p.D317Y|1|0.44|ENSG00000104237|chr8:54624831-54624831|G/T|missense_variant'] 25515 11963 FEHALMLF True PC9_epitope_Rep5 1006.49462410806 1006.49352993586 51.012 2 -1.7207280233460065 0.4382444862141451 1.0 ['ENST00000452157.5_1_5:56218957-56234137:-|nuORF', 'nc|ENSG00000155545|Q7Z3K6-4|MIER3', 'nc|ENSG00000155545|Q7Z3K6-3|MIER3', 'ENSG00000155545|ENST00000381199|MIER3', 'nc|ENSG00000155545|Q7Z3K6-2|MIER3'] 106091 13964 STCVLEFEM True PC9_epitope_Rep1 1057.4460192331298 1057.44492993586 58.55 2 -1.7207599262712168 0.4382444862141451 1.0 ['PCDHGB3|p.A257Lfs*6|1|0.19|ENSG00000262209|chr5:141371160-141371160|C/-|frameshift_variant', 'PCDHGB3|p.I394Sfs*12|1|0.22|ENSG00000262209|chr5:141371571-141371571|A/-|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 107758 1562 SVSRIHRSIAE True H1975_Epitope_Rep1 1253.68403254209 1253.68237490379 8.1347 3 -1.7207657997862986 0.4382444862141451 1.0 ['ENSG00000066084|ENST00000301180|DIP2B'] 69771 25381 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 106.52 3 -1.7207994294734363 0.43824585988677944 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 20439 17531 EPGEHVTG True PC9_epitope_Rep3 824.36644638948 824.36534993586 72.617 2 -1.7208092325116002 0.43824585988677944 1.0 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 119517 14665 VASFVLCWLPF True PC9_epitope_Rep1 1280.66275206232 1280.6616499358602 61.23 2 -1.7210725672355007 0.4382646025179056 1.0 ['ENSG00000088035|ENST00000263440|ALG6'] 84554 23474 QASRRRRRR True NCI_RA007_Epitope_Rep4 1240.7449505195598 1240.74384993586 101.87 2 -1.7211215993537778 0.4382646025179056 1.0 ['ENST00000264079.10_1_19:7595197-7598755:+|nuORF'] 23673 6418 EYDDQRALEIH True NCI_RA007_Epitope_Rep1 1387.6368075661499 1387.6357099358602 28.989 2 -1.7211873103515283 0.4382646025179056 1.0 ['ENSG00000180611|ENST00000392452|MB21D2'] 141040 3584 YSLFLPLHELW True PC9_epitope_Rep2 1416.74417318716 1416.7425149037902 19.062 3 -1.721283972900046 0.43828197115117273 1.0 ['ENST00000586136.5_1_19:30097284-30104129:+|nuORF', 'ENSG00000105171|ENST00000585603|POP4'] 129959 24125 VRVGNPAA True NCI_RA007_Epitope_Rep2 782.4398861132598 782.43878993586 101.34 2 -1.7215461099521425 0.4383118327402135 1.0 ['ENST00000318988.10_1_17:7155218-7155278:-|nuORF'] 20197 8925 ENILTNYENQ True H1975_Epitope_Rep2 1236.5622456435601 1236.5611499358602 39.292 2 -1.721570377125308 0.4383118327402135 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 32268 22383 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 92.504 2 -1.7215727927156548 0.4383118327402135 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 139770 26409 YPEYLSNFP True PC9_epitope_Rep3 1128.51277627 1128.51112490379 107.9 3 -1.7217227497236822 0.4383465670247548 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 72468 18571 MKWVRLTKP True NCI_RA007_Epitope_Rep5 1157.6743198055299 1157.67268490379 78.253 3 -1.7217449846803852 0.4383465670247548 1.0 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38', 'ENST00000502571.1_1_5:147784249-147790417:+|nuORF', 'FBXO38|p.S606Rfs*9|1|0.1|ENSG00000145868|chr5:148425598-148425602|TAGTC/-|frameshift_variant'] 10897 23473 CYLYRRRQQ True NCI_RA007_Epitope_Rep4 1284.6509585919998 1284.6498699358601 101.86 2 -1.7219221909556852 0.438363933587625 1.0 ['ENST00000464117.1_1_1:201857869-201860971:+|nuORF', 'ENSG00000198892|ENST00000362011|SHISA4'] 5268 10557 ALPTVASK True H1975_Epitope_Rep3 785.4647038787699 785.4641549679301 45.674 1 -1.7223247355275197 0.43839866555462886 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ'] 46283 6700 ISPSAFGEILY True H1975_Epitope_Rep1 1195.6124903112698 1195.6113899358602 30.817 2 -1.7223356790383255 0.43839866555462886 1.0 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-2|ASCC2', 'ENST00000458594.5_1_22:30197094-30223519:-|nuORF', 'ENST00000465667.6_1_22:30218318-30228314:-|nuORF'] 53099 24419 KPRQKMGKETF True H1975_Epitope_Rep3 1348.7285402063596 1348.72744993586 101.66 2 -1.7224394524533337 0.4384000355844185 1.0 ['DAB1|p.E474Rfs*27|1|0.54|ENSG00000173406|chr1:57015007-57015007|T/-|frameshift_variant', 'nc|ENSG00000173406|O75553-3|DAB1', 'nc|ENSG00000173406|O75553-4|DAB1', 'nc|ENSG00000173406|O75553-5|DAB1', 'ENSG00000173406|ENST00000371236|DAB1', 'nc|ENSG00000173406|O75553|DAB1'] 120218 9642 VEARRHQRLQ True NCI_RA007_Epitope_Rep1 1291.7221493863099 1291.72104993586 41.505 2 -1.722452055433601 0.4384000355844185 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 48578 25032 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 103.67 3 -1.7227035960700228 0.4384507606084868 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 12773 9176 DLENLAGPV True PC9_epitope_Rep1 926.4709114580198 926.46980993586 40.145 2 -1.7227730721191101 0.4384681248540515 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 530 21457 AAPLPYSS True PC9_epitope_Rep2 804.4017692690401 804.40066993586 88.007 2 -1.7228050256569367 0.4384806129143454 1.0 ['ENST00000261799.8_1_5:149535034-149535298:-|nuORF'] 112553 23122 TLEEKRKMT True PC9_epitope_Rep6 1134.60669373818 1134.60505490379 102.04 3 -1.7228512707755315 0.4384806129143454 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 39423 23017 HKTFFPSRGQ True H1975_Epitope_Rep2 1203.61489035311 1203.61324490379 94.986 3 -1.7229783607085252 0.4385090957612418 1.0 ['ENSG00000124203|ENST00000371030|ZNF831'] 43302 23177 IFVFMFPL True H1975_Epitope_Rep1 1012.5455970517598 1012.54448993586 96.354 2 -1.7230599491830687 0.4385327017590678 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 127818 21066 VPELLGTA True NCI_RA007_Epitope_Rep5 798.44871946146 798.44762993586 88.044 2 -1.7231652980695618 0.4385327017590678 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33'] 110267 6613 TERQDFHQW True H1975_Epitope_Rep1 1245.5526840193697 1245.5515899358602 30.493 2 -1.7232623332118286 0.43853894479346195 1.0 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA'] 84438 11849 QAETLFQEIFP True NCI_RA007_Epitope_Rep2 1321.65541775241 1321.65432993586 50.691 2 -1.72328183293982 0.4385451876890233 1.0 ['ENSG00000203668|ENST00000366553|CHML'] 124448 12386 VGVHPSPGA True PC9_epitope_Rep2 819.4239016959499 819.42280993586 52.952 2 -1.7234418860167742 0.4385736682344308 1.0 ['ENST00000588984.5_1_19:3751026-3754498:-|nuORF', 'ENSG00000011132|ENST00000316757|APBA3'] 128456 24114 VPSEHALL True NCI_RA007_Epitope_Rep1 864.4705175352 864.46942993586 99.884 2 -1.7236861871277518 0.43858751848433974 1.0 ['ENST00000278412.6_1_11:57093684-57093861:-|nuORF'] 87036 20592 QNAITCGF True H1975_Epitope_Rep2 852.37998827864 852.37888993586 85.299 2 -1.7237551165999443 0.43858751848433974 1.0 ['ENST00000555208.1_1_14:77795315-77795561:+|nuORF', 'ENST00000553431.5_1_14:77787511-77795561:+|nuORF', 'nc|ENSG00000100577|O43708-2|GSTZ1', 'nc|ENSG00000100577|O43708-3|GSTZ1', 'ENST00000555093.1_1_14:77794152-77797535:+|nuORF', 'nc|ENSG00000100577|O43708|GSTZ1', 'ENSG00000100577|ENST00000216465|GSTZ1'] 127715 15472 VPAPPFSLGKL True PC9_epitope_Rep2 1124.65938093404 1124.65828993586 64.79 2 -1.7237750944220624 0.43858751848433974 1.0 ['ENST00000456754.6_1_X:47444724-47445414:+|nuORF'] 75543 8871 NKYLEATGQL True PC9_epitope_Rep4 1135.5873381925899 1135.58569490379 41.653 3 -1.723779916293624 0.43858751848433974 1.0 ['ENSG00000168827|ENST00000486715|GFM1', 'nc|ENSG00000168827|Q96RP9-2|GFM1'] 10704 18749 CRLRKKIKP True NCI_RA007_Epitope_Rep4 1140.72775236072 1140.7261049037902 81.113 3 -1.7238457463841619 0.4386048786996064 1.0 ['ENST00000461039.1_1_1:64021028-64034235:+|nuORF', 'EFCAB7|p.F431Lfs*3|1|0.24|ENSG00000203965|chr1:63557186-63557186|T/-|frameshift_variant', 'nc|ENSG00000203965|A8K855-2|EFCAB7', 'ENSG00000203965|ENST00000371088|EFCAB7'] 15809 15056 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 64.579 2 -1.7239100903713247 0.4386236033131358 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 2959 5905 AFFALWWRK True PC9_epitope_Rep5 1223.6603839935499 1223.65873490379 27.707 3 -1.7239313981763855 0.4386236033131358 1.0 ['ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 33269 6917 GKISREPEPA True PC9_epitope_Rep4 1082.57202248162 1082.57092993586 33.833 2 -1.7239776983540869 0.4386236033131358 1.0 ['ENST00000459799.1_1_1:151140554-151141558:+|nuORF', 'nc|ENSG00000163156|Q9BWG6-2|SCNM1', 'ENSG00000163156|ENST00000368905|SCNM1', 'ENST00000497147.1_1_1:151139275-151141558:+|nuORF'] 139245 8974 YLHLPDLG True NCI_RA007_Epitope_Rep5 926.4861675993399 926.48506993586 41.176 2 -1.7240659600590815 0.43865208013697105 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 59132 21517 LEYRPVKVRG True PC9_epitope_Rep6 1215.7087907379498 1215.70714490379 95.638 3 -1.7241370825011064 0.4386534442122115 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 124579 5124 VGVSLRQR True NCI_RA007_Epitope_Rep4 913.5457481641299 913.54464993586 26.224 2 -1.7241903741381563 0.4386534442122115 1.0 ['ENST00000311549.10_1_13:27825489-27827914:+|nuORF'] 43329 15580 IFWLWWRACWF True PC9_epitope_Rep5 1612.7801818563996 1612.7785349037902 64.938 3 -1.7243065675008455 0.4386819197545276 1.0 ['SLC6A14|p.L565Ffs*2|1|0.13|ENSG00000268104|chrX:116457685-116457686|-/TT|frameshift_variant', 'ENSG00000268104|ENST00000598581|SLC6A14'] 27039 20806 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 87.012 2 -1.7243867072421437 0.43869224954422165 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 46741 5495 ITELPQQVG True NCI_RA007_Epitope_Rep2 983.52876068731 983.52766993586 25.991 2 -1.7244152380651816 0.43869224954422165 1.0 ['ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 66747 9610 LSLLFKGMMV True NCI_RA007_Epitope_Rep5 1137.62900940589 1137.62737490379 43.607 3 -1.7244556450523951 0.43869224954422165 1.0 ['ENST00000403263.5_1_2:206867288-206867456:-|nuORF'] 99294 4608 SHRPKRRRFH True PC9_epitope_Rep4 1375.78100167511 1375.77934490379 24.235 3 -1.7245242011421635 0.43869224954422165 1.0 ['nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7'] 16624 5814 EEQAVQLYY True PC9_epitope_Rep4 1141.52915461013 1141.52749490379 29.223 3 -1.724536137839172 0.43869224954422165 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 84295 8297 PYRLLKTWV True NCI_RA007_Epitope_Rep4 1174.68626438822 1174.6846049037902 38.724 3 -1.7245380212848356 0.43869224954422165 1.0 ['ENST00000521560.1_2_8:99118529-99129303:-|nuORF'] 61235 16228 LIMMVALV True PC9_epitope_Rep5 888.5176680517599 888.51656993586 67.41 2 -1.724556785536243 0.43869224954422165 1.0 ['nc|ENSG00000078295|Q08462-2|ADCY2', 'ENSG00000078295|ENST00000338316|ADCY2'] 94740 22827 RSGTGHGD True PC9_epitope_Rep5 785.34162862397 785.3410849679301 92.8 1 -1.7245695222356114 0.4386984892782107 1.0 ['ENST00000413052.6_1_1:113217551-113217650:+|nuORF'] 130295 8044 VSHGPCPV True PC9_epitope_Rep6 794.37450897538 794.37340993586 40.428 2 -1.7246806716802463 0.43872696147090867 1.0 ['ENST00000476555.5_1_6:24775851-24775938:+|nuORF'] 64072 10023 LPATLTTA True NCI_RA007_Epitope_Rep4 786.44871946146 786.44762993586 45.398 2 -1.7248888763490882 0.4387443168554564 1.0 ['ENSG00000205277|ENST00000536621|MUC12', 'nc|ENSG00000205277|Q9UKN1|MUC12'] 27036 19258 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 80.941 2 -1.724971911485429 0.4387616718541574 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 31029 5665 GASVDGENKP True PC9_epitope_Rep1 972.4512386426 972.4501499358599 26.612 2 -1.7249764230097113 0.4387679105390114 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 44695 9337 ILTPRYCS True PC9_epitope_Rep5 951.4847877003501 951.48368993586 40.868 2 -1.7251625173832454 0.4388074964985216 1.0 ['nc|ENSG00000126012|P41229-4|KDM5C'] 77400 14081 NSFWLNEDLI True NCI_RA007_Epitope_Rep1 1249.59790287629 1249.5968099358602 58.802 2 -1.725283276164091 0.4388248502162 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A', 'ZNF37A|p.G124V|1|0.64|ENSG00000075407|chr10:38117522-38117522|G/T|missense_variant'] 95265 20100 RVPCLIPP True PC9_epitope_Rep6 893.5156939058099 893.51458993586 89.99 2 -1.7254918460151378 0.43882757010904 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 92158 10232 RLEPKDGKGVF True PC9_epitope_Rep5 1244.6877209401998 1244.68662993586 44.346 2 -1.7255257221620128 0.43882757010904 1.0 ['ENSG00000176170|ENST00000592299|SPHK1', 'nc|ENSG00000176170|Q9NYA1-3|SPHK1', 'nc|ENSG00000176170|Q9NYA1-2|SPHK1'] 36394 8300 GVFLCRPGWSA True NCI_RA007_Epitope_Rep3 1191.5858987239499 1191.58426490379 39.768 3 -1.7255766806500223 0.43882757010904 1.0 ['AluSx_dup71151|chr11:64318596-64318908:-|1.0470340491982686|0.4573538105707593|1.19|538.0|17|2|anti-sense'] 64281 22884 LPISGHPT True NCI_RA007_Epitope_Rep3 820.44430278736 820.44320993586 99.461 2 -1.7256034135789737 0.43882757010904 1.0 ['ENST00000497655.1_1_1:202932056-202932895:-|nuORF'] 25311 5154 FDRFSRND True PC9_epitope_Rep3 1055.47845644995 1055.47734993586 24.909 2 -1.725783092430506 0.43885603770229414 1.0 ['nc|ENSG00000129990|O00445-2|SYT5', 'ENSG00000129990|ENST00000354308|SYT5'] 36914 21562 GVLPSPEVVL True H1975_Epitope_Rep1 1008.5855472874399 1008.58444993586 89.604 2 -1.7260151820674894 0.43887338972312684 1.0 ['ENST00000534381.1_1_11:226080-230657:-|nuORF', 'ENST00000529055.5_1_11:224232-236273:-|nuORF'] 119282 23461 VALLVMPW True PC9_epitope_Rep4 927.52519596035 927.52464496793 98.531 1 -1.7264817477049916 0.43901978217381643 1.0 ['ENSG00000169676|ENST00000304374|DRD5'] 121172 8475 VESEGSGIF True H1975_Epitope_Rep2 923.4236269124299 923.42252993586 37.551 2 -1.7265362274145823 0.43901978217381643 1.0 ['nc|nan|Q8N4M7|C10orf126'] 92223 17627 RLKAGHGG True NCI_RA007_Epitope_Rep5 794.4511195032999 794.45002993586 74.584 2 -1.7268158444299635 0.43901978217381643 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 124012 13133 VGSFSASL True PC9_epitope_Rep2 766.3861192049 766.38502993586 55.788 2 -1.7268765369155528 0.43901978217381643 1.0 ['ENSG00000184530|ENST00000329722|C6orf58'] 19075 14853 ELGEFVKN True PC9_epitope_Rep1 934.47599683846 934.47488993586 61.951 2 -1.726895006139011 0.43901978217381643 1.0 ['ENSG00000174125|ENST00000308979|TLR1'] 60444 11700 LGVPGQATP True PC9_epitope_Rep4 838.45486747106 838.45376993586 52.766 2 -1.7269118812316715 0.43901978217381643 1.0 ['ENST00000586790.5_1_19:56159538-56160159:+|nuORF'] 73511 23849 MVIMKRWLPWR True PC9_epitope_Rep2 1514.8366511866998 1514.8355499358602 97.205 2 -1.7269409207745168 0.43901978217381643 1.0 ['ENST00000409333.1_1_2:170657480-170662026:+|nuORF'] 61859 18030 LLCLDPALPV True NCI_RA007_Epitope_Rep5 1052.59400379616 1052.59290993586 76.15 2 -1.726973246924091 0.43901978217381643 1.0 ['ENST00000464833.1_1_3:184102666-184104037:+|nuORF'] 123801 21830 VGRLKHERV True PC9_epitope_Rep3 1092.651610215 1092.65050993586 89.269 2 -1.7269754871608323 0.43901978217381643 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 122264 10135 VGASARLL True PC9_epitope_Rep6 785.47593726881 785.47484993586 49.602 2 -1.7270293464070392 0.43901978217381643 1.0 ['ENSG00000205710|ENST00000381365|C17orf107', 'ENST00000521575.1_1_17:4803525-4803825:+|nuORF'] 68837 17423 LTLWEKRTA True PC9_epitope_Rep5 1116.62914343492 1116.6280499358602 72.018 2 -1.7273218950709825 0.43901978217381643 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 112692 19132 TLGGRLPLHR True H1975_Epitope_Rep1 1118.66726027914 1118.6661699358601 79.735 2 -1.7274503160823227 0.4390260166035052 1.0 ['ENST00000338447.10_1_11:63722497-63722614:+|nuORF'] 52479 24888 KKVKMATK True PC9_epitope_Rep1 932.5841078187999 932.58355496793 100.64 1 -1.7274868350511565 0.4390322508946234 1.0 ['nc|nan|Q6PH81-2|C16orf87', 'ENSG00000155330|ENST00000285697|C16orf87'] 59295 10213 LFGSLAGV True PC9_epitope_Rep1 762.42759009406 762.42648993586 44.163 2 -1.7282384013352947 0.43913850393963305 1.0 ['nc|ENSG00000214881|A8MWL7|TMEM14DP'] 125969 11160 VLDLIDAIAP True NCI_RA007_Epitope_Rep2 1038.5961119711399 1038.5950099358602 47.992 2 -1.728631184611343 0.4391794279110084 1.0 ['ENSG00000120756|ENST00000457734|PLS1'] 20451 9179 EPGVEPQDSRR True NCI_RA007_Epitope_Rep3 1268.61092717148 1268.60929490379 43.194 3 -1.7287459988358804 0.4391794279110084 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 103477 8559 SPQEVLSPA True PC9_epitope_Rep6 926.4709114580198 926.46980993586 42.691 2 -1.7287460893691864 0.4391794279110084 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 113944 7157 TPAAMGLLR True PC9_epitope_Rep5 928.5164221818 928.51532993586 32.499 2 -1.7288866328414514 0.4391856601509107 1.0 ['ENSG00000170631|ENST00000394909|ZNF16'] 48628 25327 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 105.35 3 -1.7291195713650227 0.43920300484509045 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 122199 5496 VGALRALH True NCI_RA007_Epitope_Rep5 835.50282072299 835.50172993586 27.829 2 -1.729259357398507 0.4392425740923891 1.0 ['ENST00000605573.1_1_3:187871072-187871573:-|nuORF'] 133188 17079 VVRRSKKV True H1975_Epitope_Rep2 970.6399829021399 970.63888993586 70.96 2 -1.7293084062227628 0.4392550366147726 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 72105 24722 MFHHGVPI True PC9_epitope_Rep2 936.4639926861199 936.46288993586 100.77 2 -1.729356580627107 0.4392550366147726 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 123195 17744 VGLCPKPL True PC9_epitope_Rep2 825.4782457679299 825.47714993586 73.535 2 -1.7293989763555857 0.43925638660784727 1.0 ['nc|ENSG00000184481|P98177-2|FOXO4', 'ENSG00000184481|ENST00000374259|FOXO4'] 112894 5897 TLKTQVYMLS True PC9_epitope_Rep4 1182.6318458568599 1182.6301949037902 29.583 3 -1.729408833628243 0.43925638660784727 1.0 ['ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 79287 13130 PAPSKALSGP True PC9_epitope_Rep2 923.5076313199099 923.50652993586 55.777 2 -1.7294504607278354 0.43925773654091893 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.R1075*|1|0.13|ENSG00000172493|chr4:87132334-87132341|GTATTCTC/-|frameshift_variant'] 39334 1547 HIYWDFKPGGA True PC9_epitope_Rep3 1289.61930702721 1289.61766490379 8.5166 3 -1.7294741342495632 0.43925773654091893 1.0 ['ENSG00000130035|ENST00000252318|GALNT8'] 97238 8819 SEAAERPQG True H1975_Epitope_Rep3 943.4359229316299 943.4353749679301 38.929 1 -1.7296248465374164 0.43928619049735546 1.0 ['ENSG00000118298|ENST00000369111|CA14', 'ENST00000607652.5_1_1:150230352-150235277:+|nuORF'] 101196 10174 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 45.767 2 -1.7298339639318356 0.4393222222222222 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 139777 26498 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 107.9 3 -1.7298730398819162 0.4393222222222222 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 127825 25469 VPERLLGTA True PC9_epitope_Rep5 954.5498304850598 954.54872993586 103.21 2 -1.729890957522147 0.4393222222222222 1.0 ['ENSG00000100568|ENST00000554659|VTI1B'] 84553 22900 QASQPAPTHS True H1975_Epitope_Rep1 1022.47812209678 1022.4770299358601 95.234 2 -1.729911278032475 0.4393222222222222 1.0 ['CON__Q0VCM5'] 64005 5781 LNYIFSHAE True PC9_epitope_Rep4 1092.52400966004 1092.52290993586 29.089 2 -1.7300062612501872 0.4393506738814013 1.0 ['ACACA|p.Q1070E|1|0.11|ENSG00000278540|chr17:37235013-37235013|G/C|missense_variant'] 72400 22409 MKKLSGHP True NCI_RA007_Epitope_Rep5 896.49020743396 896.48910993586 93.363 2 -1.73014300383907 0.43936801404413234 1.0 ['ENSG00000178950|ENST00000314167|GAK'] 64950 5623 LQEPPASAI True PC9_epitope_Rep2 924.4916469025999 924.49054993586 27.014 2 -1.730290248173387 0.4393693613617173 1.0 ['ENST00000397477.2_1_22:32665849-32666506:+|nuORF'] 127221 9955 VLVVSAAL True NCI_RA007_Epitope_Rep2 770.4901903506199 770.48908993586 43.349 2 -1.730342072607884 0.4393693613617173 1.0 ['ENST00000321930.4_17:78977795-78978311:+|nuORF'] 83098 22485 PSPEVSCC True H1975_Epitope_Rep1 820.30952576032 820.30842993586 93.531 2 -1.7304013182666123 0.4393707086194254 1.0 ['ENSG00000129965|ENST00000397270|INS-IGF2'] 127497 25623 VNLPPALK True PC9_epitope_Rep2 850.5276384885 850.52708496793 104.25 1 -1.7304084755951992 0.4393707086194254 1.0 ['ENSG00000168564|ENST00000504169|CDKN2AIP'] 52919 23192 KPGKKWKVMT True PC9_epitope_Rep2 1201.7005345533698 1201.69888490379 94.69 3 -1.7306128244135894 0.43940319731594324 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.A690Hfs*28|1|0.39|ENSG00000188177|chr2:112325177-112325177|G/-|frameshift_variant'] 68187 13604 LTDRVMTVSF True PC9_epitope_Rep4 1167.59579470131 1167.59468993586 60.222 2 -1.7306208915055823 0.43940319731594324 1.0 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3'] 82632 15627 PQKRTKRKGR True NCI_RA007_Epitope_Rep5 1253.7792703396099 1253.7781699358602 66.818 2 -1.7306910394575121 0.43940319731594324 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 135202 7977 WESPNRGWERE True PC9_epitope_Rep3 1444.64837530936 1444.64671490379 35.661 3 -1.7306952428242195 0.43940319731594324 1.0 ['SPTBN4|p.D29N|1|0.1|ENSG00000160460|chr19:40472706-40472706|G/A|missense_variant'] 100248 12774 SIYAVPEK True H1975_Epitope_Rep1 905.4858332461699 905.48528496793 54.197 1 -1.7306959684714334 0.43940319731594324 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 10832 24937 CTDHAMHV True PC9_epitope_Rep6 912.3582072882401 912.35710993586 110.82 2 -1.7307203883915527 0.43940319731594324 1.0 ['ENST00000469753.5_1_2:46300785-46301094:+|nuORF'] 29606 25086 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 109.25 3 -1.7307232794635088 0.43940319731594324 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 44601 18699 ILQQQAQQY True PC9_epitope_Rep4 1118.57202248162 1118.57092993586 80.006 2 -1.731065727910675 0.43945386273246384 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant'] 111747 17617 TIHYQEEIYSF True H1975_Epitope_Rep1 1428.6561460284 1428.65504993586 73.305 2 -1.7311227176306825 0.4394823085041382 1.0 ['ENST00000487874.1_1_1:35496244-35497272:-|nuORF', 'ENST00000493328.5_1_1:35496244-35497238:-|nuORF'] 22163 6755 ESSLWRST True PC9_epitope_Rep4 964.46140940348 964.46030993586 33.179 2 -1.7311643775305376 0.43948280458544386 1.0 ['ENSG00000108018|ENST00000263054|SORCS1', 'SORCS1|p.V427Sfs*40|1|0.14|ENSG00000108018|chr10:106699348-106699348|C/-|frameshift_variant', 'nc|ENSG00000108018|Q8WY21-4|SORCS1', 'nc|ENSG00000108018|Q8WY21-3|SORCS1', 'nc|ENSG00000108018|Q8WY21-2|SORCS1', 'SORCS3|p.L394Wfs*12|1|0.11|ENSG00000156395|chr10:105105481-105105481|C/-|frameshift_variant', 'SORCS3|p.E763Rfs*43|1|0.29|ENSG00000156395|chr10:105211159-105211159|G/-|frameshift_variant', 'ENSG00000156395|ENST00000369701|SORCS3'] 109221 5305 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 25.247 2 -1.7312875760397435 0.43948280458544386 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 139467 6156 YLQREWRFLWN True PC9_epitope_Rep4 1609.8153810648096 1609.81372490379 30.705 3 -1.731446610236465 0.43948280458544386 1.0 ['ENSG00000215262|ENST00000399881|KCNU1'] 37140 5334 GVQCGREPLRQ True PC9_epitope_Rep5 1241.6298887942498 1241.62825490379 25.529 3 -1.7315541898592157 0.43948280458544386 1.0 ['ENST00000462927.5_1_22:37678610-37705275:+|nuORF'] 122341 8764 VGDARLQL True PC9_epitope_Rep3 870.4923156089399 870.49120993586 38.664 2 -1.7315873842483518 0.43948280458544386 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566082.1_1_16:58051091-58054146:+|nuORF'] 96676 24016 SAKKPCPV True PC9_epitope_Rep4 828.4527592960799 828.45166993586 100.85 2 -1.7316260932090566 0.43948280458544386 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 135597 12009 WLEPLLARIKH True NCI_RA007_Epitope_Rep2 1374.8135901596597 1374.8119349037902 51.303 3 -1.7316918235610532 0.43948280458544386 1.0 ['ENSG00000141429|ENST00000269195|GALNT1'] 139727 13199 YNSAGAGP True PC9_epitope_Rep2 735.3187679210699 735.3182149679301 56.047 1 -1.7316937249548452 0.43948280458544386 1.0 ['ENSG00000113805|ENST00000263665|CNTN3'] 35523 6384 GSRYSRLKQL True NCI_RA007_Epitope_Rep3 1206.6833042660999 1206.6816449037901 32.114 3 -1.7317116612188557 0.43948280458544386 1.0 ['ENST00000296543.9_1_4:140222738-140222885:+|nuORF'] 92670 4512 RNNSYAVIITS True NCI_RA007_Epitope_Rep1 1236.64625005104 1236.64459490379 21.654 3 -1.731803613339968 0.4394903751096893 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR'] 102757 8778 SNDTFEIPL True PC9_epitope_Rep3 1034.4920408254197 1034.49094993586 38.718 2 -1.7318352889771353 0.4394903751096893 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15'] 36200 10551 GVCCFPCL True NCI_RA007_Epitope_Rep3 840.3332384103599 840.33214993586 48.558 2 -1.7320004456451594 0.4394903751096893 1.0 ['ENST00000465987.1_1_20:34053609-34055133:+|nuORF'] 70692 24501 LWLLCRGG True PC9_epitope_Rep4 916.4952928143999 916.49418993586 102.73 2 -1.7321326857787893 0.4394966010574488 1.0 ['ENSG00000256043|ENST00000433477|CTSO'] 131957 10422 VTSAARTEL True PC9_epitope_Rep1 946.5083595959 946.50726993586 44.975 2 -1.7321512527655771 0.43950282686689846 1.0 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 24643 17585 FAKIDDRLV True PC9_epitope_Rep2 1075.60259433391 1075.6014899358602 72.918 2 -1.7322042598074157 0.43951930872863376 1.0 ['ENST00000401088.8_1_1:16722851-16723172:+|nuORF'] 52549 16820 KLFTFDLNPSD True NCI_RA007_Epitope_Rep5 1295.63976768827 1295.63812490379 71.445 3 -1.732405401067361 0.43951930872863376 1.0 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 117602 21513 TVTASDQAVN True H1975_Epitope_Rep1 1004.47745339044 1004.47634993586 89.401 2 -1.7325327584149628 0.43951930872863376 1.0 ['ENSG00000197410|ENST00000357232|DCHS2', 'DCHS2|p.E1385Kfs*12|1|0.17|ENSG00000197410|chr4:154304756-154304756|C/-|frameshift_variant'] 10342 22621 CFRTRSHS True NCI_RA007_Epitope_Rep5 992.4610325639999 992.45992993586 94.193 2 -1.732594193025064 0.43951930872863376 1.0 ['nc|ENSG00000198010|Q9P1A6-3|DLGAP2', 'nc|ENSG00000198010|Q9P1A6-2|DLGAP2', 'nc|ENSG00000198010|Q9P1A6|DLGAP2', 'ENSG00000198010|ENST00000637795|DLGAP2'] 64843 5612 LQDILNEPPL True NCI_RA007_Epitope_Rep5 1150.62338934814 1150.6217549037901 28.275 3 -1.7326940656238312 0.43951930872863376 1.0 ['ENST00000434772.7_1_19:44556222-44559318:+|nuORF'] 139773 25274 YPEYLSNFP True PC9_epitope_Rep4 1128.51277627 1128.51112490379 106.01 3 -1.7327127983213935 0.43951930872863376 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 45113 4444 IPLPTRPHWFL True PC9_epitope_Rep4 1375.7764763749499 1375.7748449037902 23.554 3 -1.7327725852382785 0.43951930872863376 1.0 ['ENSG00000163660|ENST00000295926|CCNL1', 'nc|ENSG00000163660|Q9UK58-6|CCNL1', 'ENST00000476367.5_1_3:156867074-156874849:-|nuORF', 'ENST00000474539.5_1_3:156866032-156868247:-|nuORF', 'ENST00000470121.5_1_3:156866032-156869342:-|nuORF', 'ENST00000481173.1_1_3:156867820-156868247:-|nuORF', 'ENST00000464679.5_1_3:156867272-156869982:-|nuORF'] 133145 25358 VVQVIKLA True H1975_Epitope_Rep3 868.5745886809199 868.57404496793 105.47 1 -1.7328709408645115 0.43951930872863376 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 126896 15240 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 63.89 2 -1.7329157976644527 0.4395477465070304 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 140147 2430 YQRLVPESCPV True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 13.013 3 -1.7329584478203008 0.4395504320206126 1.0 ['HOXD10|p.K283Rfs*18|1|0.1|ENSG00000128710|chr2:176119053-176119054|AA/-|frameshift_variant', 'ENSG00000128710|ENST00000249501|HOXD10'] 3373 11750 AGHGSSGGGG True H1975_Epitope_Rep1 742.29942945882 742.29888496793 50.19 1 -1.7330013005258686 0.4395504320206126 1.0 ['SPINK5|p.N755Mfs*27|1|0.19|ENSG00000133710|chr5:148119004-148119004|A/-|frameshift_variant', 'nc|ENSG00000133710|Q9NQ38-2|SPINK5', 'ENSG00000133710|ENST00000256084|SPINK5', 'nc|ENSG00000133710|Q9NQ38-3|SPINK5'] 34613 7450 GPWGLQLPSNM True PC9_epitope_Rep6 1198.5804789903398 1198.57882490379 37.89 3 -1.7330284351354581 0.4395504320206126 1.0 ['ENST00000600603.5_2_19:50363860-50363989:+|nuORF', 'ENST00000601612.5_1_19:50363535-50363989:+|nuORF'] 905 10898 ADLRAHRRT True H1975_Epitope_Rep1 1094.6057226517398 1094.6046299358602 46.881 2 -1.7330991069832582 0.4395504320206126 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 79098 6748 PALPARAPA True PC9_epitope_Rep5 862.50248636982 862.50138993586 30.928 2 -1.733331493948766 0.4395802098950525 1.0 ['ENST00000504806.5_1_5:10564479-10564683:+|nuORF'] 33338 23812 GKQLSLHELT True PC9_epitope_Rep5 1124.61897267404 1124.6183749679299 96.574 1 -1.7334164089100397 0.4395802098950525 1.0 ['ENSG00000166886|ENST00000300131|NAB2', 'nc|ENSG00000166886|Q15742-3|NAB2'] 22764 7294 ETVNDFWRMV True NCI_RA007_Epitope_Rep1 1295.59685733047 1295.59576993586 32.363 2 -1.7334544963075285 0.4395802098950525 1.0 ['nc|ENSG00000132334|P23469-3|PTPRE', 'nc|ENSG00000132334|P23469-2|PTPRE', 'ENSG00000132334|ENST00000254667|PTPRE'] 81127 16824 PKGEKRNPIR True NCI_RA007_Epitope_Rep4 1193.6992886834098 1193.69818993586 72.897 2 -1.7335541194556718 0.4395864336006041 1.0 ['ENSG00000166012|ENST00000448108|TAF1D'] 48601 25319 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 103.99 3 -1.7336193101578514 0.4395944835550423 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 105773 22767 SSHDASLH True H1975_Epitope_Rep2 852.3725943990801 852.37148993586 94.012 2 -1.733751408555844 0.4395944835550423 1.0 ['nc|ENSG00000151718|Q6AWC2-4|WWC2', 'ENSG00000151718|ENST00000403733|WWC2', 'nc|ENSG00000151718|Q6AWC2-6|WWC2', 'nc|ENSG00000151718|Q6AWC2-5|WWC2', 'nc|ENSG00000151718|Q6AWC2-3|WWC2', 'nc|ENSG00000151718|Q6AWC2-2|WWC2'] 133443 12832 VVWSSEKT True PC9_epitope_Rep6 934.47599683846 934.47544496793 60.867 1 -1.7338043693293828 0.4395944835550423 1.0 ['nc|ENSG00000234616|O75564|JRK', 'ENSG00000234616|ENST00000612905|JRK', 'JRK|p.A471P|1|0.21|ENSG00000234616|chr8:142664648-142664648|C/G|missense_variant'] 85512 10257 QGAEAKAP True NCI_RA007_Epitope_Rep3 770.3922672144998 770.39116993586 47.421 2 -1.733883251182247 0.4395944835550423 1.0 ['ENSG00000164626|ENST00000359534|KCNK5'] 80336 12782 PGGGKRKG True PC9_epitope_Rep5 755.4402204664299 755.43912993586 54.177 2 -1.73406042772126 0.4395944835550423 1.0 ['ENSG00000066654|ENST00000396083|THUMPD1', 'ENST00000569768.1_1_16:20750201-20753061:-|nuORF'] 63896 9463 LNPFQNLSIYY True NCI_RA007_Epitope_Rep2 1370.6870522338602 1370.6859499358602 41.42 2 -1.7341337975576747 0.4395944835550423 1.0 ['MYO3B|p.S393Y|1|0.16|ENSG00000071909|chr2:170383182-170383182|C/A|missense_variant'] 108901 7625 TAAPTNRQI True PC9_epitope_Rep2 970.5195929859399 970.51848993586 34.701 2 -1.7341686384298214 0.4395944835550423 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 22565 12179 ETKLPKIMPE True PC9_epitope_Rep2 1184.6474959209997 1184.64638993586 52.158 2 -1.7341989718122226 0.4395944835550423 1.0 ['ENST00000421692.5_2_6:30003742-30025305:-|nuORF', 'ENST00000431012.5_1_6:30024744-30025305:-|nuORF'] 68224 7489 LTEADFRE True H1975_Epitope_Rep2 979.4610750503099 979.45996993586 33.756 2 -1.7343145852412118 0.4395944835550423 1.0 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B', 'ENST00000589604.5_1_18:61064221-61077532:-|nuORF'] 52433 21230 KKRRHLTPT True PC9_epitope_Rep6 1135.69380938015 1135.6927099358602 94.51 2 -1.7343594641498032 0.4395944835550423 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 3899 13084 AHCGARAS True H1975_Epitope_Rep2 771.34460582943 771.3440549679301 55.45 1 -1.734377215641081 0.4395944835550423 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B'] 92091 25360 RKWQTLKAT True PC9_epitope_Rep3 1130.6560268890998 1130.65492993586 102.97 2 -1.7343836765772291 0.4395944835550423 1.0 ['ENST00000389045.7_1_2:230701608-230701689:-|nuORF'] 36661 17850 GVIGLLILILL True H1975_Epitope_Rep2 1135.79441785487 1135.79387496793 73.981 1 -1.7345185262868965 0.4396340176995081 1.0 ['ENST00000531550.1_1_11:118007744-118012097:-|nuORF', 'nc|ENSG00000177098|Q8IWT1-3|SCN4B', 'nc|ENSG00000177098|Q8IWT1-2|SCN4B', 'ENSG00000177098|ENST00000324727|SCN4B'] 110082 12199 TELTIESEA True PC9_epitope_Rep5 991.4709710276699 991.46986993586 51.909 2 -1.7345785637894937 0.43963583879205065 1.0 ['ENST00000398849.6_1_17:28942955-28960136:+|nuORF'] 135243 22817 WFKHLPASIV True PC9_epitope_Rep4 1196.67061432408 1196.66950993586 95.987 2 -1.734724571986696 0.43963583879205065 1.0 ['COG1|p.A940Gfs*7|1|0.42|ENSG00000166685|chr17:73208324-73208325|-/G|frameshift_variant', 'ENSG00000166685|ENST00000299886|COG1'] 111733 16058 TIHDRKEF True PC9_epitope_Rep1 1044.53524305008 1044.5341499358601 66.581 2 -1.734743054208038 0.43963583879205065 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 36132 13786 GVAPFNPG True PC9_epitope_Rep3 757.3758888743699 757.37478993586 58.106 2 -1.7349547971800454 0.43963583879205065 1.0 ['ENST00000439351.5_2_3:186285284-186285335:+|nuORF'] 15771 6314 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 29.353 2 -1.7350069160941763 0.43963583879205065 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 3112 23414 AGAHALYL True PC9_epitope_Rep4 814.4337381036601 814.43264993586 98.345 2 -1.7350351099744545 0.43963583879205065 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 122958 25290 VGHSAGHP True PC9_epitope_Rep1 760.36163579256 760.36052993586 102.18 2 -1.735111731038502 0.43963583879205065 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 139776 26416 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 107.51 3 -1.7351430389579756 0.43963583879205065 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 94416 20085 RRRRNTGRRHL True PC9_epitope_Rep4 1476.872276291 1476.87116993586 85.39 2 -1.7351606243856537 0.43963583879205065 1.0 ['ENST00000434837.7_1_6:37664674-37664983:-|nuORF'] 19067 20043 ELFYVKYRNL True PC9_epitope_Rep5 1343.7237720957498 1343.72266993586 82.149 2 -1.7351680245555248 0.43963583879205065 1.0 ['nc|ENSG00000124177|Q8TD26-2|CHD6'] 61092 17660 LIHTRKKYY True NCI_RA007_Epitope_Rep1 1220.70297708152 1220.7018899358602 72.828 2 -1.735206078497195 0.43963583879205065 1.0 ['nc|ENSG00000184617|A6NDX5|ZNF840P'] 31260 19672 GDEPRKVLLRL True NCI_RA007_Epitope_Rep4 1294.7721192704998 1294.77102993586 85.016 2 -1.7355769110666974 0.4396704858335554 1.0 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA'] 86818 12381 QLPRHRLWGSQ True H1975_Epitope_Rep3 1376.74255047772 1376.7414499358601 52.81 2 -1.7355877469432728 0.4396704858335554 1.0 ['SIK2|p.R341Gfs*35|1|0.4|ENSG00000170145|chr11:111705059-111705059|C/-|frameshift_variant'] 32271 23291 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 96.057 2 -1.7357356939509234 0.4397100129894641 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 92708 19664 RNSHLGKKKL True NCI_RA007_Epitope_Rep2 1179.72002412799 1179.71947496793 81.438 1 -1.7359321181865839 0.43972245351096306 1.0 ['ADNP2|p.R792S|1|0.48|ENSG00000101544|chr18:80137789-80137789|G/T|missense_variant'] 83074 19656 PSLSEVRPPGD True NCI_RA007_Epitope_Rep4 1152.5775017848798 1152.57586490379 84.947 3 -1.735975327716095 0.43972245351096306 1.0 ['ENST00000380818.7_1_5:68665579-68665750:-|nuORF'] 4411 20874 AIPSIMNVLL True PC9_epitope_Rep6 1069.62055289717 1069.61944993586 93.065 2 -1.7361167469587897 0.4397286735645455 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant'] 102044 13671 SLQVQRQVP True PC9_epitope_Rep4 1053.59309227937 1053.59198993586 60.477 2 -1.736394090221034 0.43976819831921576 1.0 ['nc|ENSG00000161643|A6NMB1|SIGLEC16', 'SIGLEC11|p.L421Cfs*102|1|0.1|ENSG00000161640|chr19:49958745-49958746|-/GACCCCGGGCA|frameshift_variant', 'nc|ENSG00000161640|Q96RL6-2|SIGLEC11', 'ENSG00000161640|ENST00000447370|SIGLEC11', 'SIGLEC11|p.D101Tfs*17|1|0.53|ENSG00000161640|chr19:49960711-49960711|C/-|frameshift_variant'] 75323 8146 NINNTLGPAL True NCI_RA007_Epitope_Rep3 1025.5505587610498 1025.54946993586 39.155 2 -1.7369997517146099 0.4398281756426764 1.0 ['nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF'] 67508 14657 LSTFKLYRDKR True NCI_RA007_Epitope_Rep2 1425.8092330552097 1425.80812993586 61.68 2 -1.73702701238203 0.4398281756426764 1.0 ['nc|ENSG00000112494|Q86WB7-2|UNC93A', 'ENSG00000112494|ENST00000230256|UNC93A'] 76311 8843 NPRPPPRKD True H1975_Epitope_Rep1 1075.58867560527 1075.58756993586 38.937 2 -1.7370655564764494 0.4398281756426764 1.0 ['FAM117A|p.S413N|1|0.38|ENSG00000121104|chr17:49711379-49711379|C/T|missense_variant'] 121616 22568 VFGKLGRS True H1975_Epitope_Rep3 862.5024863698198 862.50138993586 94.327 2 -1.7371223161240614 0.4398281756426764 1.0 ['ENSG00000196576|ENST00000359337|PLXNB2', 'PLXNB2|p.T1371Rfs*18|1|0.5|ENSG00000196576|chr22:50280553-50280553|T/-|frameshift_variant'] 3172 7223 AGDWVVSAW True PC9_epitope_Rep2 989.4606811274899 989.45958993586 33.173 2 -1.7371553102706268 0.4398281756426764 1.0 ['ENST00000359904.7_1_17:66244441-66244810:+|nuORF'] 105360 24105 SRRIQRDV True PC9_epitope_Rep3 1028.5839245779998 1028.5828299358602 98.003 2 -1.7371862762202717 0.4398281756426764 1.0 ['ENSG00000074356|ENST00000389005|NCBP3', 'nc|ENSG00000074356|Q53F19-2|NCBP3'] 135664 8842 WLPHTEHC True PC9_epitope_Rep5 1021.4439855175301 1021.44288993586 38.954 2 -1.7372499953863263 0.4398281756426764 1.0 ['THADA|p.Q1622H|1|0.27|ENSG00000115970|chr2:43292175-43292175|C/G|missense_variant'] 50108 22596 KKKEKKKSGRV True H1975_Epitope_Rep3 1314.8459529171 1314.84430490379 94.448 3 -1.737281558980092 0.4398281756426764 1.0 ['ENST00000481407.5_1_7:92207439-92210911:-|nuORF'] 70248 7060 LVRFDRVL True NCI_RA007_Epitope_Rep3 1016.6130994479598 1016.61200993586 34.887 2 -1.7375093699074806 0.4398281756426764 1.0 ['LTR12C_dup1159|chr6:63441884-63443495:-|1.4512251268435548|0.0180559155246374|6.33|493.0|67|2|anti-sense'] 69927 13932 LVKEGNEAPV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 61.493 2 -1.7375519950881666 0.4398281756426764 1.0 ['nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 130848 9489 VTAVVLVALG True H1975_Epitope_Rep1 940.5957180483198 940.59462993586 41.419 2 -1.7375636668433254 0.4398281756426764 1.0 ['SLC8A1|p.F840L|1|0.38|ENSG00000183023|chr2:40139426-40139426|G/C|missense_variant'] 11675 13744 DGSVRLWQ True NCI_RA007_Epitope_Rep2 959.4824792012298 959.4819349679301 58.107 1 -1.737605597258082 0.4398281756426764 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557314.5_1_14:20839728-20850189:-|nuORF'] 18553 14583 EKLQHQLDEPK True NCI_RA007_Epitope_Rep2 1363.7095785835897 1363.7084899358601 61.389 2 -1.737648875749075 0.4398281756426764 1.0 ['ENST00000432132.2_1_9:98909238-98910135:+|nuORF'] 56609 18338 LDHVEFKRF True PC9_epitope_Rep4 1189.62439240765 1189.6232899358602 78.605 2 -1.7376681346269116 0.4398281756426764 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B'] 32437 20453 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 85.614 2 -1.7377876728644333 0.4398281756426764 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 15093 5927 DYTWEYEYYEI True H1975_Epitope_Rep1 1572.6296564970396 1572.62854993586 27.871 2 -1.7379012698828908 0.439857927742938 1.0 ['MRAP2|p.F62Lfs*3|1|0.28|ENSG00000135324|chr6:84062946-84062946|T/-|frameshift_variant', 'ENSG00000135324|ENST00000257776|MRAP2'] 83767 21793 PVIITRNSH True PC9_epitope_Rep1 1035.5825275956702 1035.5814299358601 88.647 2 -1.7379053734324303 0.439857927742938 1.0 ['ENSG00000137218|ENST00000373018|FRS3'] 130475 5400 VSPKTQRVI True H1975_Epitope_Rep2 1026.6185787512197 1026.61748993586 25.804 2 -1.737928672246348 0.439857927742938 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 93950 24519 RRHKKLPLTA True PC9_epitope_Rep4 1218.76730867358 1218.7662099358602 102.8 2 -1.7380110171604142 0.43986414491209375 1.0 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17', 'ENST00000575447.1_1_16:24979927-25026645:-|nuORF'] 56870 6409 LDPLLPGG True NCI_RA007_Epitope_Rep2 780.4381547777599 780.43704993586 29.537 2 -1.7380798257845393 0.43986460240830144 1.0 ['ENST00000252818.4_1_19:18390620-18391193:-|nuORF'] 25886 23625 FFLFKKLREL True PC9_epitope_Rep3 1339.80162849363 1339.7999849037901 96.162 3 -1.7381427823938755 0.43986460240830144 1.0 ['ENST00000507678.5_1_4:177243228-177249478:+|nuORF'] 13727 22560 DPVTAGVM True PC9_epitope_Rep1 788.37384026904 788.37274993586 91.581 2 -1.7381468286180426 0.43986460240830144 1.0 ['ENST00000323853.9_1_2:96940550-96940679:-|nuORF'] 46965 17801 ITPPPAKK True H1975_Epitope_Rep2 850.5276384885 850.52654993586 73.792 2 -1.7381724281024935 0.43986460240830144 1.0 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 61709 24100 LKYLNKIKPP True NCI_RA007_Epitope_Rep4 1212.7594293284799 1212.75778490379 104.48 3 -1.7382580237502305 0.43986460240830144 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 122148 15893 VGAGFLYP True H1975_Epitope_Rep1 822.42759009406 822.4270449679301 66.442 1 -1.7383063096999791 0.43986460240830144 1.0 ['ENSG00000100714|ENST00000652337|MTHFD1'] 123868 15932 VGRRAAKA True NCI_RA007_Epitope_Rep5 827.5089687325898 827.5084249679301 68.007 1 -1.7383128731980693 0.43986460240830144 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 131093 21632 VTEAARAEMDT True NCI_RA007_Epitope_Rep1 1192.5394020239999 1192.53887496793 88.528 1 -1.738313211085751 0.43986460240830144 1.0 ['ENST00000589518.1_1_17:43324750-43325174:-|nuORF'] 86862 10282 QLQRDALRHFA True PC9_epitope_Rep2 1353.72656606041 1353.72546993586 44.88 2 -1.73835741759619 0.43986460240830144 1.0 ['ENSG00000235194|ENST00000452015|PPP1R3E'] 21376 20757 ERHRRRVISA True NCI_RA007_Epitope_Rep4 1278.73813380362 1278.7370299358602 89.931 2 -1.7383825736734775 0.43987081881339757 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|99|3|sense'] 17373 6775 EHDIEDSETA True H1975_Epitope_Rep2 1144.45202648824 1144.45039490379 30.975 3 -1.7384707880246972 0.43987970392072 1.0 ['ENSG00000186951|ENST00000407236|PPARA', 'ENST00000493286.1_1_22:46594271-46615974:+|nuORF'] 34258 18871 GNRLRAELGR True NCI_RA007_Epitope_Rep5 1140.64758746372 1140.64648993586 79.431 2 -1.7384795940574906 0.43987970392072 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 113843 19428 TNFRFTRFVE True NCI_RA007_Epitope_Rep5 1315.66731984879 1315.6662299358602 81.617 2 -1.7385002513586825 0.43987970392072 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 119432 8817 VAQQRYWEWTP True NCI_RA007_Epitope_Rep4 1462.6993482530597 1462.69824993586 40.724 2 -1.738595782789028 0.43987970392072 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 88437 4817 QSQKELEFMFK True PC9_epitope_Rep3 1413.6962370185695 1413.69460490379 23.625 3 -1.7386212198749365 0.43987970392072 1.0 ['ENSG00000236279|ENST00000422142|CLEC2L'] 121884 13711 VFPNLRVA True PC9_epitope_Rep2 914.5337864980999 914.53268993586 58.029 2 -1.738697183054266 0.4398832835920251 1.0 ['ENST00000301732.9_1_16:2379695-2379815:-|nuORF'] 18260 13666 EIQKLIKEPAP True NCI_RA007_Epitope_Rep1 1264.73908780672 1264.73798993586 57.17 2 -1.7388840321316406 0.4398832835920251 1.0 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 121173 12486 VESELRSI True PC9_epitope_Rep3 931.49746055903 931.49636993586 53.052 2 -1.7388880281123584 0.4398832835920251 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000460093.1_1_2:9768976-9770356:-|nuORF'] 48579 25120 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 104.01 3 -1.73890982044627 0.4398832835920251 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 30987 8922 GASFHART True PC9_epitope_Rep3 845.41439964141 845.41330993586 39.269 2 -1.7389828649324122 0.4398832835920251 1.0 ['TM6SF1|p.L317F|1|0.28|ENSG00000136404|chr15:83136508-83136508|C/T|missense_variant'] 87635 5066 QQQVPVTPQ True NCI_RA007_Epitope_Rep5 1023.5349086969097 1023.53380993586 26.188 2 -1.7391011499834703 0.4398832835920251 1.0 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 91320 17011 RGRKRFVS True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 73.715 2 -1.7392468628911424 0.4398832835920251 1.0 ['nc|ENSG00000150593|Q53EL6-2|PDCD4', 'ENSG00000150593|ENST00000280154|PDCD4'] 122976 21236 VGHSSPTL True PC9_epitope_Rep3 796.4079172786401 796.40682993586 86.975 2 -1.7392596776572706 0.4398832835920251 1.0 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A'] 59217 18900 LFEGGREL True PC9_epitope_Rep4 919.4763311916299 919.4752299358599 80.786 2 -1.739347638471272 0.4398832835920251 1.0 ['ENST00000513322.5_1_5:115176765-115176948:-|nuORF'] 133043 21691 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 89.732 2 -1.7394621042818008 0.4398832835920251 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 6233 16990 APPRPLDR True NCI_RA007_Epitope_Rep5 920.5191990631199 920.51865496793 72.112 1 -1.739539332425169 0.4398832835920251 1.0 ['ENSG00000116128|ENST00000234739|BCL9', 'BCL9|p.Q700Tfs*9|1|0.09|ENSG00000116128|chr1:147620246-147620247|-/C|frameshift_variant'] 59171 22374 LFALNPQS True NCI_RA007_Epitope_Rep4 888.4705175352001 888.46942993586 97.07 2 -1.739615794502851 0.4398832835920251 1.0 ['PCDHGA5|p.R80Q|2|0.1|ENSG00000253485|chr5:141364569-141364569|G/A|missense_variant'] 136054 9542 WRERWQEYFTF True H1975_Epitope_Rep1 1646.76301113878 1646.76190993586 41.627 2 -1.7396355315611487 0.4398832835920251 1.0 ['ENST00000367103.3_1_1:206907394-206907589:+|nuORF'] 70468 16615 LVVALWGPL True PC9_epitope_Rep2 966.5902387450599 966.58914993586 69.153 2 -1.7396717711405008 0.4398832835920251 1.0 ['ENST00000571707.1_1_17:79609405-79612656:+|nuORF', 'nc|ENSG00000182612|Q9H1Z9|TSPAN10', 'ENSG00000182612|ENST00000611590|TSPAN10'] 117261 25327 TVLVHLEIKVL True PC9_epitope_Rep3 1262.79620876002 1262.7951099358602 102.84 2 -1.7397302055350303 0.4398832835920251 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 60748 17333 LHRQQRQRKFL True PC9_epitope_Rep2 1508.8800470100398 1508.8789499358602 71.926 2 -1.7397425508379398 0.4398832835920251 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 101719 13553 SLNEDERLL True PC9_epitope_Rep5 1087.55095268387 1087.54984993586 57.155 2 -1.7397463642880528 0.4398832835920251 1.0 ['ABL1|p.G583S|1|0.26|ENSG00000097007|chr9:130884037-130884037|G/A|missense_variant'] 28270 20787 FRMWQKAHL True PC9_epitope_Rep4 1215.6335176227099 1215.63242993586 88.105 2 -1.739799797766354 0.4398832835920251 1.0 ['ENSG00000111339|ENST00000228936|ART4'] 96677 21925 SAKKPCPV True PC9_epitope_Rep6 828.4527592960799 828.45166993586 97.239 2 -1.7398024233642626 0.4398832835920251 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 133368 12471 VVVGRALL True NCI_RA007_Epitope_Rep5 825.5436229058099 825.54252993586 54.628 2 -1.7398192011307425 0.4398832835920251 1.0 ['LRRN2|p.Q520H|1|0.19|ENSG00000170382|chr1:204618433-204618433|C/G|missense_variant', 'LRRN2|p.L597Cfs*29|1|0.17|ENSG00000170382|chr1:204618204-204618204|G/-|frameshift_variant', 'ENSG00000170382|ENST00000367177|LRRN2'] 122013 18672 VFVLPFPV True NCI_RA007_Epitope_Rep3 916.5422259234799 916.54112993586 81.682 2 -1.7398543948021692 0.4398832835920251 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 41142 8763 HVARKEEQ True H1975_Epitope_Rep2 995.5148419586699 995.51374993586 38.67 2 -1.7398568178102611 0.4398832835920251 1.0 ['ENSG00000101213|ENST00000542869|PTK6', 'nc|ENSG00000101213|Q13882-2|PTK6'] 80536 6646 PGPLSKQGS True NCI_RA007_Epitope_Rep2 869.46068112749 869.45958993586 30.461 2 -1.7399091468647572 0.43990059245123925 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 95555 8715 RWSFSVVW True H1975_Epitope_Rep3 1065.5396001545298 1065.53850993586 38.523 2 -1.739985186405758 0.4399205671241083 1.0 ['ENST00000265801.6_2_8:20105580-20105898:-|nuORF'] 5388 6499 ALSLQQNYPPV True NCI_RA007_Epitope_Rep5 1228.6451874218799 1228.6440899358602 31.664 2 -1.7399967809406114 0.4399205671241083 1.0 ['FAM171A1|p.S820*|1|0.11|ENSG00000148468|chr10:15213129-15213129|G/-|frameshift_variant', 'ENSG00000148468|ENST00000378116|FAM171A1'] 137028 16097 YALLPREI True PC9_epitope_Rep6 973.55966689277 973.55856993586 74.253 2 -1.7400056470280751 0.4399205671241083 1.0 ['nc|ENSG00000183837|Q9UL41-2|PNMA3', 'ENSG00000183837|ENST00000593810|PNMA3'] 16065 4710 EDYPFLVWRNF True H1975_Epitope_Rep3 1484.7088503075995 1484.7072149037901 23.243 3 -1.7400184604965823 0.4399205671241083 1.0 ['ENST00000359634.9_1_2:196544929-196545025:+|nuORF'] 12989 22907 DLLTARRRHTP True PC9_epitope_Rep6 1334.7531151614198 1334.75200993586 101.22 2 -1.7400918127140053 0.4399205671241083 1.0 ['ENST00000369501.2_1_6:88875621-88875864:-|nuORF'] 127902 17554 VPGPHSADVPL True PC9_epitope_Rep6 1087.56620882519 1087.5651099358602 80.161 2 -1.7401283861021937 0.43992678056356777 1.0 ['ENST00000396743.7_1_X:48780565-48780950:-|nuORF'] 104612 24599 SQRRLRRRW True PC9_epitope_Rep4 1312.7701026382397 1312.7690099358601 103.11 2 -1.740201834431012 0.4399281134210468 1.0 ['ENST00000378616.3_1_X:37553591-37553678:+|nuORF'] 60562 9609 LHFDLPWYLR True NCI_RA007_Epitope_Rep1 1358.7135417652198 1358.71189490379 41.374 3 -1.740262141139616 0.4399281134210468 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 89864 19257 RATRKSLLHV True H1975_Epitope_Rep3 1179.72002412799 1179.7189299358602 80.746 2 -1.7404033660154277 0.439951632942847 1.0 ['ENST00000592988.5_1_17:76183451-76198833:+|nuORF', 'ENSG00000183077|ENST00000409257|AFMID', 'nc|ENSG00000183077|Q63HM1-2|AFMID'] 39680 17722 HLRRCLHHP True NCI_RA007_Epitope_Rep5 1167.6195988940701 1167.6179549037902 74.949 3 -1.7404970536081004 0.439951632942847 1.0 ['ENST00000532851.1_1_1:110171948-110172194:+|nuORF'] 3125 7911 AGAPGPPD True H1975_Epitope_Rep1 680.31295426464 680.3124049679301 35.382 1 -1.7406738080626365 0.43998003217039217 1.0 ['ENST00000599680.1_1_19:50162907-50164763:-|nuORF'] 92050 17656 RKSLKENI True NCI_RA007_Epitope_Rep4 986.58727862294 986.58618993586 76.394 2 -1.7407866791077162 0.4399813637725049 1.0 ['ENST00000526950.1_1_12:104719175-104720128:+|nuORF'] 60405 17273 LGTPSEYHYL True H1975_Epitope_Rep2 1178.56078909158 1178.5596899358602 71.732 2 -1.7408128348468315 0.4399813637725049 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B', 'MYO7B|p.K742Rfs*6|1|0.19|ENSG00000169994|chr2:127593620-127593620|G/-|frameshift_variant'] 133039 20935 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 86.672 2 -1.7408672734724127 0.4399875759861561 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 22725 7446 ETSPLRDL True H1975_Epitope_Rep2 929.4818104948899 929.48070993586 33.586 2 -1.7409170168528623 0.4399889073765946 1.0 ['ENSG00000157551|ENST00000398938|KCNJ15'] 64223 12342 LPGTPLQERMG True H1975_Epitope_Rep3 1197.6175927750498 1197.61648993586 52.658 2 -1.740938182794879 0.4399889073765946 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2'] 92743 14037 RNYYLEKREK True NCI_RA007_Epitope_Rep5 1397.7415474182096 1397.7404499358602 60.685 2 -1.7410599826633792 0.4399964504786308 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 57522 7124 LEDNTFMTLW True NCI_RA007_Epitope_Rep1 1268.57472490356 1268.57362993586 31.701 2 -1.7411000135765726 0.4399964504786308 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 41892 7139 ICYQLYFC True NCI_RA007_Epitope_Rep1 1051.45071069075 1051.44960993586 31.759 2 -1.741142021124436 0.4399964504786308 1.0 ['ENST00000394885.7_1_15:77241588-77241771:+|nuORF'] 125229 7530 VIIYELLDELM True H1975_Epitope_Rep1 1349.71524112765 1349.71360490379 33.962 3 -1.741245628459935 0.4400137542427402 1.0 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 126098 8125 VLEPFPGV True NCI_RA007_Epitope_Rep2 856.4694549060399 856.46834993586 36.237 2 -1.7413610551065495 0.4400199656147746 1.0 ['ENST00000438934.5_2_22:18979470-18980127:+|nuORF'] 69764 26075 LVFRKPRGLFI True PC9_epitope_Rep3 1344.8394109846797 1344.83776490379 106.22 3 -1.7415686915141204 0.44002262669284264 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 87276 10228 QPPDTYLK True H1975_Epitope_Rep1 960.4916469025999 960.49109496793 44.285 1 -1.7416696777832534 0.44002262669284264 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'TNPO1|p.Q693Rfs*7|1|0.12|ENSG00000083312|chr5:72893636-72893636|A/-|frameshift_variant', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 29631 23868 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 105.1 3 -1.7416732909623727 0.44002262669284264 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 81791 18039 PLPPLTAKS True PC9_epitope_Rep5 922.5487678559 922.54766993586 74.402 2 -1.7417665145955166 0.44002262669284264 1.0 ['ENSG00000174106|ENST00000308330|LEMD3'] 83443 22266 PTPCRQFFLS True PC9_epitope_Rep6 1194.5855643707798 1194.58390490379 98.614 3 -1.7419256037099722 0.4400314981589104 1.0 ['ENST00000551178.5_2_17:3576816-3577080:-|nuORF'] 106094 14024 STCVLEFEM True PC9_epitope_Rep5 1057.4460192331298 1057.44492993586 58.961 2 -1.7419396788395778 0.4400314981589104 1.0 ['PCDHGB3|p.A257Lfs*6|1|0.19|ENSG00000262209|chr5:141371160-141371160|C/-|frameshift_variant', 'PCDHGB3|p.I394Sfs*12|1|0.22|ENSG00000262209|chr5:141371571-141371571|A/-|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 85440 7928 QEYKQKLAR True NCI_RA007_Epitope_Rep2 1162.6458561282197 1162.64474993586 35.469 2 -1.7420287718012684 0.4400314981589104 1.0 ['ENST00000471511.1_1_20:36712307-36718274:+|nuORF'] 28324 20377 FRRLIALNHR True NCI_RA007_Epitope_Rep1 1294.7734566831798 1294.77181490379 83.475 3 -1.7420420838234631 0.4400314981589104 1.0 ['ENST00000393966.1_1_16:67314567-67316137:+|nuORF'] 131439 19172 VTILLMEI True H1975_Epitope_Rep2 930.54599097458 930.5448899358599 79.576 2 -1.7421787110603317 0.4400314981589104 1.0 ['ENST00000570910.1_1_17:79649904-79650744:-|nuORF'] 40632 17257 HRLRQRGLW True NCI_RA007_Epitope_Rep5 1220.70029174292 1220.6991899358602 73.153 2 -1.7422020851654743 0.4400377086452615 1.0 ['ENST00000528797.5_1_11:57413095-57413371:-|nuORF'] 115622 5872 TRVFGVYLLWF True PC9_epitope_Rep2 1399.7652429849097 1399.76359490379 27.982 3 -1.7422768463493463 0.44004391899385575 1.0 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000487054.1_1_1:225605673-225607031:-|nuORF'] 62914 24183 LLPCLHSA True PC9_epitope_Rep3 852.45275929608 852.45166993586 98.31 2 -1.7426386352267607 0.44006121973671075 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 122119 7060 VGAETPRALG True PC9_epitope_Rep5 969.5243440132098 969.52324993586 32.124 2 -1.7427809478138712 0.44007852009582116 1.0 ['ENST00000507667.1_3_4:141445438-141445687:+|nuORF'] 122009 26888 VFVIYKFKRRI True H1975_Epitope_Rep3 1467.9078248976698 1467.90672993586 112.45 2 -1.7428018273319408 0.44008472978518115 1.0 ['SORCS1|p.V1126I|1|0.11|ENSG00000108018|chr10:106577551-106577551|C/T|missense_variant'] 3545 4678 AGLSGHHRAP True NCI_RA007_Epitope_Rep4 1001.5155106650101 1001.51440993586 24.415 2 -1.7429524385733703 0.44010335802688194 1.0 ['nc|ENSG00000021574|Q9UBP0-4|SPAST', 'nc|ENSG00000021574|Q9UBP0-3|SPAST', 'nc|ENSG00000021574|Q9UBP0-2|SPAST', 'ENSG00000021574|ENST00000315285|SPAST'] 68450 19262 LTEYRSYNP True PC9_epitope_Rep1 1141.5403880001697 1141.53928993586 78.893 2 -1.7430012382695887 0.44010335802688194 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 23215 10938 EVLYFPDRWWH True H1975_Epitope_Rep1 1546.7357337617798 1546.73462993586 47.037 2 -1.7430052699556289 0.44010335802688194 1.0 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000569441.5_1_16:732796-733478:-|nuORF'] 98844 3514 SGSWPEMF True PC9_epitope_Rep2 939.3796539254699 939.37854993586 18.796 2 -1.7432634712097568 0.4401206569594003 1.0 ['ENST00000376236.8_1_10:26800727-26800796:+|nuORF'] 61570 23115 LKKKKCNKF True PC9_epitope_Rep1 1135.68996986967 1135.68832490379 93.709 3 -1.7434373351900012 0.44013928317955997 1.0 ['ENST00000259605.10_1_9:36338912-36339155:-|nuORF'] 128687 17076 VPVSRPIL True PC9_epitope_Rep3 879.5541875895099 879.55308993586 70.835 2 -1.7435137491258808 0.44013928317955997 1.0 ['FCRL5|p.H721Qfs*8|1|0.22|ENSG00000143297|chr1:157524355-157524356|-/T|frameshift_variant', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'ENST00000489998.5_1_1:157765891-157772050:-|nuORF'] 42299 9012 IDVVEGNRVY True H1975_Epitope_Rep2 1162.59823722946 1162.5971499358602 39.616 2 -1.7435828824293271 0.44013928317955997 1.0 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000438989.1_1_2:20440064-20440208:-|nuORF'] 128115 15432 VPLKKAKESK True NCI_RA007_Epitope_Rep4 1126.70739375562 1126.70628993586 67.028 2 -1.7436557116716915 0.44015169997116815 1.0 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 130617 8655 VSSLVSNLL True NCI_RA007_Epitope_Rep4 930.53859709502 930.53750993586 40.075 2 -1.743669684321717 0.44015169997116815 1.0 ['nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 74311 7252 NELFEVREK True H1975_Epitope_Rep3 1162.59823722946 1162.5971499358602 32.867 2 -1.7437288726708597 0.4401716509763481 1.0 ['ENSG00000136935|ENST00000373555|GOLGA1', 'ENST00000475407.5_2_9:127642811-127683993:-|nuORF'] 78022 13972 NVRFSTIVRRR True NCI_RA007_Epitope_Rep2 1402.8269488080198 1402.82584993586 59.005 2 -1.7437361845388197 0.4401716509763481 1.0 ['DUSP1|p.S185Qfs*31|1|0.11|ENSG00000120129|chr5:172769759-172769760|-/A|frameshift_variant', 'ENSG00000120129|ENST00000239223|DUSP1'] 58813 18170 LESPFRIL True PC9_epitope_Rep4 973.5596668927699 973.55856993586 77.955 2 -1.743857172190264 0.4401716509763481 1.0 ['ENST00000395900.1_1_11:32457375-32459526:+|nuORF'] 35318 9137 GRQCAAPV True H1975_Epitope_Rep3 800.3963070491199 800.39520993586 40.134 2 -1.7438750808453487 0.4401716509763481 1.0 ['PXDN|p.Q499Pfs*78|1|0.08|ENSG00000130508|chr2:1663678-1663679|-/C|frameshift_variant'] 59458 16028 LFPVPPGV True PC9_epitope_Rep5 824.4796256669199 824.47852993586 66.64 2 -1.743879008812743 0.4401716509763481 1.0 ['ENST00000357681.9_1_1:203711927-203711975:+|nuORF'] 94270 17670 RRRARWHWRHL True PC9_epitope_Rep3 1628.9137471801598 1628.9126499358601 73.161 2 -1.7439066019367344 0.44017785860019515 1.0 ['ENST00000607222.1_1_1:1550199-1550712:-|nuORF'] 64020 7166 LPADDFDIY True PC9_epitope_Rep6 1067.4811417885498 1067.48004993586 36.643 2 -1.7439862698527686 0.4402235380214224 1.0 ['ENSG00000170236|ENST00000532404|USP50', 'nc|ENSG00000170236|Q70EL3|USP50'] 92053 21570 RKSRVVDLNLL True PC9_epitope_Rep6 1311.7986683715096 1311.79756993586 95.846 2 -1.7440329138943258 0.4402235380214224 1.0 ['nc|ENSG00000145431|Q9NRA1-4|PDGFC', 'ENST00000506880.5_3_4:157684244-157699382:-|nuORF', 'nc|ENSG00000145431|Q9NRA1-2|PDGFC', 'ENSG00000145431|ENST00000502773|PDGFC'] 124925 22720 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 93.832 2 -1.7441288471723542 0.4402630090811314 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 43988 17882 IIFFKFDP True H1975_Epitope_Rep2 1025.5586042636098 1025.55807496793 74.104 1 -1.7442563108658764 0.4402643337879342 1.0 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-2|TANGO2', 'ENST00000401833.5_1_22:20008736-20024378:+|nuORF', 'ENST00000479679.5_1_22:20008736-20035575:+|nuORF', 'ENST00000475446.5_1_22:20004559-20035575:+|nuORF'] 74369 12446 NERLQHYFNQH True NCI_RA007_Epitope_Rep2 1484.6909088276802 1484.68980993586 53.022 2 -1.7443632640230797 0.4402643337879342 1.0 ['nc|ENSG00000066933|B2RTY4-2|MYO9A', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF', 'MYO9A|p.E1131Kfs*31|1|0.23|ENSG00000066933|chr15:71899766-71899766|C/-|frameshift_variant', 'MYO9A|p.V1543Dfs*13|1|0.1|ENSG00000066933|chr15:71897875-71897876|-/AT|frameshift_variant', 'nc|ENSG00000066933|B2RTY4-3|MYO9A', 'MYO9A|p.Q871Hfs*50|1|0.1|ENSG00000066933|chr15:71916442-71916443|-/GCAG|frameshift_variant'] 91375 20386 RHDGKKLLLQ True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.71858993586 85.35 2 -1.7445420510743483 0.44030380308238165 1.0 ['ENST00000496384.6_2_7:140425901-140426006:-|nuORF'] 76348 23911 NPVLKTNSSK True PC9_epitope_Rep4 1086.6033226099 1086.6022299358601 100.42 2 -1.7446696003637847 0.44031000875918885 1.0 ['GHR|p.G42V|1|0.95|ENSG00000112964|chr5:42629092-42629092|G/T|missense_variant'] 38779 23043 HGVHVLCP True PC9_epitope_Rep4 860.43269255784 860.43158993586 96.857 2 -1.7446883632823398 0.4403162142983857 1.0 ['ENST00000402886.7_1_6:35444208-35454475:-|nuORF'] 8600 6462 ATWPFWSR True NCI_RA007_Epitope_Rep4 1049.50830002625 1049.5072099358601 31.455 2 -1.7447270002255237 0.44033971217597623 1.0 ['ENST00000456170.5_1_1:44686783-44687191:-|nuORF'] 53530 21238 KRLSWKIHM True NCI_RA007_Epitope_Rep5 1197.68046781513 1197.67882490379 88.731 3 -1.7447601679974047 0.44033971217597623 1.0 ['ENSG00000016391|ENST00000315251|CHDH'] 22007 9904 ESHSQKSLFP True H1975_Epitope_Rep3 1158.56693710118 1158.5658499358601 43.127 2 -1.7449190820122382 0.44035832677361775 1.0 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 60451 13789 LGVTPPEELHT True H1975_Epitope_Rep3 1191.6135529404298 1191.61244993586 58.342 2 -1.744939318518705 0.44035832677361775 1.0 ['ENSG00000159459|ENST00000290650|UBR1'] 26779 22709 FKLVGKET True NCI_RA007_Epitope_Rep5 920.5331177917599 920.53202993586 94.542 2 -1.7449397728338165 0.44035832677361775 1.0 ['ENST00000491175.1_1_3:138340270-138348004:+|nuORF', 'ENST00000470889.5_1_3:138329799-138348004:+|nuORF', 'nc|ENSG00000158234|Q9NVQ4|FAIM', 'ENSG00000158234|ENST00000360570|FAIM', 'nc|ENSG00000158234|Q9NVQ4-2|FAIM'] 127255 14405 VLYMLTEM True NCI_RA007_Epitope_Rep1 998.48167646586 998.48056993586 60.074 2 -1.7450824987012887 0.4403760240336116 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.Q827Lfs*8|1|0.09|ENSG00000189079|chr12:45850603-45850619|AACCTGTGCAAACTTCA/-|frameshift_variant', 'ENST00000480128.1_1_12:46231109-46233281:+|nuORF', 'ENST00000479608.5_1_12:46230576-46239804:+|nuORF'] 83097 22616 PSPDISLKGL True H1975_Epitope_Rep3 1025.57571087973 1025.57460993586 94.526 2 -1.745158246694217 0.4403760240336116 1.0 ['IL17RE|p.H147L|1|0.06|ENSG00000163701|chr3:9906779-9906779|A/T|missense_variant'] 15192 17842 EACIYRLLKL True NCI_RA007_Epitope_Rep2 1220.6951148197597 1220.69400993586 74.142 2 -1.74515944326281 0.4403760240336116 1.0 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 125330 20781 VIPKRISPV True PC9_epitope_Rep1 1007.6491506035098 1007.64804993586 84.764 2 -1.7452266202506368 0.4403760240336116 1.0 ['SDC4|p.E110K|1|0.35|ENSG00000124145|chr20:45330483-45330483|C/T|missense_variant', 'nc|ENSG00000124145|P31431-2|SDC4', 'SDC4-NRG1|1|fusion', 'ENSG00000124145|ENST00000372733|SDC4', 'SDC4-NRG1|2|fusion', 'SDC4-NRG1|3|fusion', 'SDC4-NRG1|7|fusion', 'SDC4-NRG1|6|fusion', 'SDC4-NRG1|8|fusion', 'SDC4-NRG1|5|fusion', 'SDC4-NRG1|4|fusion'] 25849 8138 FFFLRREWMRQ True NCI_RA007_Epitope_Rep1 1614.8241719266998 1614.82252490379 35.652 3 -1.7452726297279304 0.4403760240336116 1.0 ['RSPO2|p.G67W|1|0.28|ENSG00000147655|chr8:107989140-107989140|C/A|missense_variant'] 77442 5585 NSPPGTQLQPS True H1975_Epitope_Rep3 1124.5462016566 1124.5451099358602 26.523 2 -1.7452874321131109 0.4403760240336116 1.0 ['ENST00000261318.4_1_12:117155416-117155572:-|nuORF'] 38801 17373 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 73.606 2 -1.745349220491168 0.4403760240336116 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 38669 10277 HFSEEVLLR True H1975_Epitope_Rep1 1128.5927579262 1128.5916699358602 44.474 2 -1.7453527445850379 0.4403760240336116 1.0 ['ENSG00000110628|ENST00000649076|SLC22A18'] 43387 7161 IGDRDPIP True NCI_RA007_Epitope_Rep2 881.4606811274899 881.45958993586 32.476 2 -1.7453533868328799 0.4403760240336116 1.0 ['ENSG00000126461|ENST00000360565|SCAF1', 'SCAF1|p.T1181Pfs*28|1|0.83|ENSG00000126461|chr19:49654785-49654785|C/-|frameshift_variant', 'SCAF1|p.P143H|1|0.32|ENSG00000126461|chr19:49646780-49646780|C/A|missense_variant'] 36867 6902 GVLLGMFL True PC9_epitope_Rep4 848.4829967951999 848.48188993586 33.773 2 -1.745358057836364 0.4403760240336116 1.0 ['ENSG00000221955|ENST00000469902|SLC12A8', 'nc|ENSG00000221955|A0AV02-2|SLC12A8'] 59671 17798 LGALKELHE True PC9_epitope_Rep6 1008.56039516876 1008.55928993586 81.094 2 -1.7456906370407368 0.4404043987229514 1.0 ['nc|ENSG00000165383|Q8N456-2|LRRC18', 'ENSG00000165383|ENST00000374160|LRRC18'] 14369 11646 DTAFPPLH True H1975_Epitope_Rep3 896.4392174069199 896.4386649679301 49.931 1 -1.7457368736204102 0.4404057199866977 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 91486 24336 RHRRYKHT True PC9_epitope_Rep4 1152.6376914863597 1152.63604490379 102.09 3 -1.745750515662246 0.4404057199866977 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'nc|ENSG00000102974|P49711-2|CTCF', 'nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL'] 65592 23449 LRVLLRREDV True PC9_epitope_Rep1 1267.7724536236701 1267.7707949037901 94.981 3 -1.7457737169393635 0.44041192315792976 1.0 ['ENST00000554119.5_2_14:96177182-96178754:-|nuORF', 'ENSG00000100721|ENST00000402399|TCL1A'] 120008 23992 VDRFLNSS True PC9_epitope_Rep4 936.46649478392 936.46538993586 100.75 2 -1.7459234883630286 0.44045758371853283 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'nc|ENSG00000112249|Q8N3C0-4|ASCC3'] 69770 25264 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 105.97 3 -1.745927224175809 0.44045758371853283 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 101544 8797 SLLGKLVSYTN True H1975_Epitope_Rep1 1193.6655885132898 1193.66448993586 38.763 2 -1.74614608724562 0.4404619408609301 1.0 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4', 'ENST00000576462.1_1_16:67991639-68002357:-|nuORF', 'ENST00000572010.5_1_16:67986261-67997363:-|nuORF'] 31021 19441 GASRGQGP True PC9_epitope_Rep3 728.3565504121199 728.3560049679301 80.006 1 -1.7462904828226058 0.4404619408609301 1.0 ['nc|ENSG00000203993|Q9H2J1|ARRDC1-AS1', 'ENST00000371417.3_1_9:140510123-140512388:-|nuORF'] 82426 13143 PPPKKTSS True H1975_Epitope_Rep1 840.4705175352 840.46942993586 55.648 2 -1.7463098403773984 0.4404619408609301 1.0 ['ENSG00000174705|ENST00000311601|SH3PXD2B'] 16033 8843 EDVAVFAR True NCI_RA007_Epitope_Rep1 905.4606811274899 905.45958993586 38.396 2 -1.7463406241027277 0.4404619408609301 1.0 ['ENSG00000163283|ENST00000392027|ALPP', 'ENSG00000163286|ENST00000295453|ALPG', 'ENSG00000163295|ENST00000295463|ALPI'] 10362 15153 CGGGEKTR True NCI_RA007_Epitope_Rep4 806.3704862241 806.36938993586 65.87 2 -1.7463711377135396 0.4404619408609301 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1'] 32944 18702 GICIKKCP True NCI_RA007_Epitope_Rep2 860.4612158048 860.46066496793 77.547 1 -1.7467520326711536 0.4404619408609301 1.0 ['ENSG00000164163|ENST00000296577|ABCE1'] 32606 23413 GGHSPDDH True H1975_Epitope_Rep1 820.30999414252 820.30888993586 97.302 2 -1.7469634100779017 0.4404619408609301 1.0 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 122147 10953 VGAGCNTK True H1975_Epitope_Rep3 748.3537735308 748.35322496793 47.219 1 -1.7469770525699984 0.4404619408609301 1.0 ['E2F5-CA3|3|fusion', 'E2F5-CA3|1|fusion', 'ENST00000521429.5_1_8:86114393-86119660:+|nuORF', 'nc|ENSG00000133740|Q15329-2|E2F5', 'ENSG00000133740|ENST00000416274|E2F5'] 62699 22342 LLLLQIRKAM True PC9_epitope_Rep3 1197.7631348099299 1197.76202993586 91.225 2 -1.747040098666731 0.4404619408609301 1.0 ['ENST00000451554.1_1_2:159145303-159312956:-|nuORF'] 132612 19657 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 81.557 2 -1.7470521766565266 0.4404619408609301 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 35203 25187 GRALWHLRLA True H1975_Epitope_Rep3 1191.69889476059 1191.6972449037899 104.77 3 -1.747064978752636 0.4404619408609301 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 38939 16093 HHHRRWRFTFS True NCI_RA007_Epitope_Rep1 1565.7864809783698 1565.7853899358602 66.703 2 -1.7471621889787188 0.4404619408609301 1.0 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 32711 14227 GGTTIHFP True PC9_epitope_Rep6 828.41300265908 828.4124549679301 66.614 1 -1.7472079232520403 0.4404619408609301 1.0 ['GUCY2F|p.P437T|1|0.23|ENSG00000101890|chrX:109453583-109453583|G/T|missense_variant'] 40631 16708 HRLRQRGLW True NCI_RA007_Epitope_Rep4 1220.70029174292 1220.6991899358602 72.452 2 -1.7472161067764789 0.4404619408609301 1.0 ['ENST00000528797.5_1_11:57413095-57413371:-|nuORF'] 103473 9627 SPQEVLSPA True PC9_epitope_Rep2 926.4709114580198 926.46980993586 42.371 2 -1.7472582498172406 0.4404619408609301 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 32707 8322 GGTLNRYLRGQ True PC9_epitope_Rep2 1233.65781779425 1233.65672993586 37.377 2 -1.7475935709461587 0.4404854261332151 1.0 ['ZDHHC6|p.D264Ifs*28|1|0.15|ENSG00000023041|chr10:112434410-112434410|C/-|frameshift_variant'] 39003 22875 HHPGQCRA True PC9_epitope_Rep6 904.40860306832 904.40750993586 101.09 2 -1.7476241432961679 0.4404854261332151 1.0 ['ENST00000438447.1_1_5:31799327-31799513:+|nuORF'] 90031 21936 RDSSKREGLLA True PC9_epitope_Rep6 1230.66804812478 1230.6669499358602 97.284 2 -1.7476660076492119 0.440508910364394 1.0 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 10549 3369 CLSYLLYYPR True PC9_epitope_Rep3 1289.64783027417 1289.64619490379 18.073 3 -1.7477403539086436 0.440508910364394 1.0 ['nc|ENSG00000079931|Q6UVY6-2|MOXD1', 'ENSG00000079931|ENST00000367963|MOXD1'] 5985 4121 APHWTSAPL True PC9_epitope_Rep3 978.49231560894 978.49120993586 20.972 2 -1.747826655446997 0.4405102289602589 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'MAP2|p.E1172*|1|0.31|ENSG00000078018|chr2:209695683-209695684|-/T|frameshift_variant', 'MAP2|p.I1173Yfs*12|1|0.41|ENSG00000078018|chr2:209695685-209695685|A/-|frameshift_variant', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2', 'MAP2|p.N615Mfs*67|1|0.26|ENSG00000078018|chr2:209694010-209694010|A/-|frameshift_variant'] 127918 17096 VPGTRSSSHV True PC9_epitope_Rep4 1025.52540664237 1025.5243099358602 73.759 2 -1.7478772782354592 0.4405102289602589 1.0 ['ENST00000433540.5_1_12:105325484-105351981:-|nuORF'] 96678 22126 SAKKPCPV True PC9_epitope_Rep6 828.4527592960799 828.45166993586 98.049 2 -1.7479872088069166 0.44052262954918214 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 61088 24842 LIHLLKCN True H1975_Epitope_Rep1 952.5528076905201 952.55170993586 102.87 2 -1.748005558036096 0.44052262954918214 1.0 ['nc|ENSG00000186334|Q495N2-3|SLC36A3', 'ENSG00000186334|ENST00000335230|SLC36A3'] 116480 23788 TTMIAILK True PC9_epitope_Rep5 889.53067526361 889.52956993586 96.481 2 -1.7480600973768132 0.440539911566209 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 83447 23619 PTPHCSHS True H1975_Epitope_Rep2 864.3548361599601 864.35372993586 97.343 2 -1.748152201980098 0.4405412294019216 1.0 ['ENST00000360535.8_1_19:36523251-36523727:-|nuORF'] 140072 24698 YQKRWVRL True PC9_epitope_Rep2 1147.66144662271 1147.66034993586 100.68 2 -1.7481683279213847 0.4405412294019216 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'ARAP1|p.F360Lfs*31|1|0.27|ENSG00000186635|chr11:72711442-72711442|A/-|frameshift_variant'] 45906 9170 ISEAEQRTI True PC9_epitope_Rep2 1045.5403880001702 1045.53928993586 40.61 2 -1.7482878637055426 0.4405451825585905 1.0 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.G345Efs*28|1|0.53|ENSG00000077420|chr10:26536206-26536206|G/-|frameshift_variant', 'nc|ENSG00000077420|Q7Z5R6-2|APBB1IP'] 97162 11130 SDSRDQVIGHR True NCI_RA007_Epitope_Rep1 1268.6221605615199 1268.62106993586 47.293 2 -1.7483191149928032 0.4405451825585905 1.0 ['nc|ENSG00000064607|Q8IX01-4|SUGP2', 'nc|ENSG00000064607|Q8IX01-3|SUGP2', 'ENSG00000064607|ENST00000452918|SUGP2'] 49988 9730 KITQLLKKHK True NCI_RA007_Epitope_Rep5 1235.8077765032301 1235.80612490379 44.051 3 -1.7483701860556153 0.4405451825585905 1.0 ['ENSG00000163623|ENST00000295886|NKX6-1'] 107988 13831 SWHLVHDK True H1975_Epitope_Rep1 1020.51411368268 1020.51357496793 58.348 1 -1.7483858223244773 0.4405451825585905 1.0 ['ENST00000450091.1_1_10:107445275-107445446:-|nuORF'] 59225 15841 LFELYPEFL True PC9_epitope_Rep1 1169.6008629984099 1169.5992149037902 65.747 3 -1.748400057352226 0.4405451825585905 1.0 ['ENSG00000179363|ENST00000319560|TMEM31'] 21891 11220 ESDLDRIMEHI True H1975_Epitope_Rep1 1356.634365038 1356.6332699358602 48.129 2 -1.7484071792866658 0.4405451825585905 1.0 ['ENSG00000132837|ENST00000255189|DMGDH', 'ENST00000518477.5_1_5:78317432-78365396:-|nuORF'] 115910 4756 TSFLVRVL True NCI_RA007_Epitope_Rep4 933.5647522732099 933.56364993586 24.727 2 -1.7484622622301975 0.44054650016067015 1.0 ['ENST00000528797.5_1_11:57414176-57414477:-|nuORF'] 95085 22708 RVAAGGAP True PC9_epitope_Rep6 697.38712226441 697.3865749679301 100.42 1 -1.7485269850452818 0.44054650016067015 1.0 ['ENST00000274364.10_1_5:75699116-75757478:+|nuORF'] 68537 13532 LTGIAQPKK True PC9_epitope_Rep4 954.5862159937799 954.58510993586 59.946 2 -1.7486122978487484 0.44055269922879176 1.0 ['TGIF2LX|p.A212Pfs*9|1|0.59|ENSG00000153779|chrX:89922719-89922719|G/-|frameshift_variant', 'ENSG00000153779|ENST00000283891|TGIF2LX'] 124805 17325 VHGGAGGA True NCI_RA007_Epitope_Rep4 624.29797290684 624.29742496793 75.027 1 -1.7487403550270972 0.4405810590699066 1.0 ['ENST00000582754.5_1_17:39081604-39092927:-|nuORF', 'ENSG00000108244|ENST00000209718|KRT23', 'CON__Q9C075', 'KRT23|p.R42P|1|0.21|ENSG00000108244|chr17:40936479-40936479|C/G|missense_variant'] 24248 3330 EYSPRRLWWYH True NCI_RA007_Epitope_Rep1 1591.76843087239 1591.76621987172 16.848 4 -1.748803475410348 0.4405823758185505 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 32325 17788 GFFGGFLLGM True PC9_epitope_Rep6 1044.5102741721998 1044.5091699358602 81.056 2 -1.7488266591962687 0.4405823758185505 1.0 ['ENST00000471528.1_1_X:154275627-154282944:+|nuORF', 'ENST00000456179.1_1_X:154261825-154282944:+|nuORF', 'ENST00000331369.5_1_2:84517942-84518395:+|nuORF', 'ENST00000484175.5_1_X:154255538-154282944:+|nuORF', 'ENSG00000165775|ENST00000369498|FUNDC2'] 34545 22441 GPSHYGPY True H1975_Epitope_Rep2 876.3766171503598 876.37552993586 92.736 2 -1.7489437393234348 0.4405836925088363 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1'] 37930 4419 GYSWRVILLRN True PC9_epitope_Rep6 1375.77245362367 1375.7707949037901 24.14 3 -1.7489640880748947 0.4405836925088363 1.0 ['ENSG00000204923|ENST00000377957|FBXO48'] 130551 20323 VSRIHHKR True NCI_RA007_Epitope_Rep2 1031.6100797561899 1031.60957496793 84.082 1 -1.7490066449978978 0.44058989075276445 1.0 ['ENST00000462302.5_1_X:100871678-100872515:-|nuORF'] 18161 14016 EIKKLSLLKKH True PC9_epitope_Rep5 1335.8602059989098 1335.85855490379 58.93 3 -1.7491861554614865 0.4406022868285765 1.0 ['ENST00000568808.5_1_15:55653104-55669251:-|nuORF'] 76480 12567 NQHIPLGELA True PC9_epitope_Rep2 1090.5771078620598 1090.5760099358602 53.647 2 -1.7491928646123915 0.4406022868285765 1.0 ['nc|ENSG00000135253|Q6ZWJ8|KCP', 'ENSG00000135253|ENST00000610776|KCP'] 10360 24727 CGFTSESY True H1975_Epitope_Rep1 892.3272839994399 892.32618993586 102.43 2 -1.7493441611329101 0.44060848466046953 1.0 ['nc|ENSG00000211772|A0A5B9|TRBC2'] 81260 21062 PKRWREELKR True PC9_epitope_Rep6 1396.80515073428 1396.8040499358601 93.838 2 -1.74943207924045 0.4406146823550267 1.0 ['ENSG00000133302|ENST00000265140|SLF1', 'nc|ENSG00000133302|Q9BQI6-2|SLF1'] 63179 23679 LLRRRLRQWRW True NCI_RA007_Epitope_Rep5 1637.9855151380898 1637.98387490379 98.412 3 -1.7496130996964678 0.4406381564369599 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 29651 22012 FVKIKRDV True PC9_epitope_Rep4 1003.6178504752298 1003.61674993586 92.89 2 -1.7496259793024282 0.4406381564369599 1.0 ['ENST00000254480.9_1_3:47629071-47629152:-|nuORF'] 64349 14828 LPLHPARAA True PC9_epitope_Rep1 944.5555845718399 944.55448993586 61.855 2 -1.7496990706745028 0.4406394717599876 1.0 ['ENST00000435359.5_1_17:2592883-2592961:-|nuORF'] 36540 4966 GVGSVAGIIH True NCI_RA007_Epitope_Rep1 908.50796567308 908.50686993586 23.399 2 -1.7497311079934459 0.4406394717599876 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.S538Lfs*13|1|0.1|ENSG00000116539|chr1:155481257-155481257|G/-|frameshift_variant'] 121430 14784 VEVYRSTK True PC9_epitope_Rep3 980.5290950404799 980.52798993586 62.002 2 -1.7498573637939983 0.4406447324692589 1.0 ['ENSG00000153201|ENST00000283195|RANBP2', 'RANBP2|p.L369Kfs*5|1|0.07|ENSG00000153201|chr2:108748957-108748958|TT/-|frameshift_variant'] 106095 11966 STCVLEFEM True PC9_epitope_Rep6 1057.4460192331298 1057.44492993586 57.289 2 -1.7499467679149625 0.4406447324692589 1.0 ['PCDHGB3|p.A257Lfs*6|1|0.19|ENSG00000262209|chr5:141371160-141371160|C/-|frameshift_variant', 'PCDHGB3|p.I394Sfs*12|1|0.22|ENSG00000262209|chr5:141371571-141371571|A/-|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 137068 16620 YAPEPGAA True H1975_Epitope_Rep3 774.3548190766198 774.3542749679301 69.433 1 -1.750147447696123 0.4406447324692589 1.0 ['ENST00000290913.7_2_3:126679085-126679208:+|nuORF'] 82739 23727 PRILKRPKKR True NCI_RA007_Epitope_Rep3 1290.8724424484599 1290.87079490379 102.86 3 -1.7502575358989239 0.4406447324692589 1.0 ['nc|ENSG00000105993|O75190-4|DNAJB6'] 98086 23042 SERKKEKKKP True PC9_epitope_Rep1 1256.7564692063597 1256.75536993586 93.431 2 -1.7502684112717772 0.4406447324692589 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5'] 6022 18007 APKRARPPR True NCI_RA007_Epitope_Rep4 1047.6413798844699 1047.6402899358602 77.911 2 -1.750287730927093 0.4406447324692589 1.0 ['ENST00000457594.2_7:74237150-74267816:-|nuORF'] 109590 17710 TDYRGKYL True PC9_epitope_Rep3 1014.5134449763398 1014.51234993586 73.319 2 -1.7503037055633184 0.4406447324692589 1.0 ['ENSG00000123131|ENST00000379341|PRDX4'] 29628 25458 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 106.89 3 -1.7503101507425147 0.4406447324692589 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 15749 13485 ECKFSEWLNIE True H1975_Epitope_Rep3 1396.6333024088397 1396.6322099358601 57.146 2 -1.7504021294288943 0.44065092886973667 1.0 ['ENSG00000145390|ENST00000692078|USP53'] 117105 8115 TVITPDPNL True NCI_RA007_Epitope_Rep2 968.51786165044 968.51676993586 36.198 2 -1.7505261415624918 0.440668202764977 1.0 ['nc|ENSG00000181222|P24928|POLR2A', 'ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A', 'POLR2A|p.N410Tfs*60|1|0.23|ENSG00000181222|chr17:7498098-7498098|G/-|frameshift_variant'] 119802 22605 VCVPHTAA True NCI_RA007_Epitope_Rep1 796.39015903952 796.38906993586 92.662 2 -1.7507151629033995 0.440669517247491 1.0 ['CAPN15|p.R517Gfs*86|1|0.43|ENSG00000103326|chr16:549091-549098|GCGACCCC/-|frameshift_variant'] 116631 16087 TVALLLEA True PC9_epitope_Rep5 828.49566965388 828.49456993586 66.867 2 -1.750725442603453 0.440669517247491 1.0 ['ENSG00000154065|ENST00000592179|ANKRD29'] 897 16101 ADLFSVAF True PC9_epitope_Rep1 868.4330693973199 868.43196993586 66.749 2 -1.7509599174156745 0.440708944890612 1.0 ['ENST00000555736.1_1_14:65714419-65769374:-|nuORF'] 85465 19824 QFHLPTITS True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 88.913 2 -1.75105163070487 0.44071514023660774 1.0 ['ARID2|p.E108Rfs*107|1|0.44|ENSG00000189079|chr12:45811452-45811452|G/-|frameshift_variant'] 10411 16163 CGYPLVSC True NCI_RA007_Epitope_Rep5 840.35099664948 840.34988993586 68.908 2 -1.7511815685859398 0.4407434894823709 1.0 ['nc|ENSG00000135119|Q96EX2-2|RNFT2'] 109924 3912 TEFVFLKISRL True H1975_Epitope_Rep3 1351.7863723523096 1351.78471490379 20.169 3 -1.751204488275289 0.4407496843084694 1.0 ['nc|ENSG00000131018|Q8NF91-12|SYNE1'] 71376 14575 LYRNPKEWTKK True H1975_Epitope_Rep3 1461.8092330552097 1461.80812993586 61.43 2 -1.7512936465498343 0.44075099689853786 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 3549 13756 AGLTPPSDRAI True PC9_epitope_Rep4 1096.58767254576 1096.58656993586 60.808 2 -1.7512996520785962 0.44075099689853786 1.0 ['ENSG00000141012|ENST00000268695|GALNS', 'ENST00000568613.5_1_16:88880849-88909575:-|nuORF'] 903 4640 ADLPSHPK True NCI_RA007_Epitope_Rep5 863.4501164437901 863.44900993586 24.527 2 -1.751326183261677 0.44075719143562875 1.0 ['ENST00000368409.7_1_1:155041410-155041584:+|nuORF'] 129798 24130 VRRLKVNE True PC9_epitope_Rep4 1012.6141620771199 1012.61306993586 101.3 2 -1.7514032122226102 0.44076338583549324 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'HNRNPUL1|p.L363Ffs*44|1|0.14|ENSG00000105323|chr19:41292331-41292332|-/T|frameshift_variant'] 117259 24842 TVLVHLEIKVL True NCI_RA007_Epitope_Rep1 1262.79620876002 1262.7951099358602 102.83 2 -1.7514586395490088 0.4407646980638873 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 31101 15609 GAVGLDLREL True PC9_epitope_Rep2 1041.58185888933 1041.5807699358602 65.318 2 -1.7515535455178712 0.4407646980638873 1.0 ['ENST00000587010.5_1_17:76783725-76794501:-|nuORF', 'ENST00000542802.7_1_17:76793816-76794501:-|nuORF', 'ENST00000592231.5_1_17:76793816-76794505:-|nuORF', 'ENST00000589225.5_1_17:76793816-76794065:-|nuORF'] 96695 23534 SALEVLRR True PC9_epitope_Rep5 942.5610638750999 942.55996993586 95.508 2 -1.7517626064342693 0.4407930442487678 1.0 ['nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.N1357Tfs*7|1|0.25|ENSG00000198216|chr1:181756035-181756035|A/-|frameshift_variant'] 44610 23181 ILQWRGTV True PC9_epitope_Rep2 971.5552502186699 971.55414993586 94.651 2 -1.7518115173149396 0.440799237977095 1.0 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 122281 7247 VGAVAFFYIHM True NCI_RA007_Epitope_Rep3 1253.6267009067699 1253.62504490379 35.616 3 -1.751990416408986 0.4408227006911217 1.0 ['ENSG00000280021|ENST00000624103|OR51F1'] 94166 20156 RRPGLRPEL True NCI_RA007_Epitope_Rep5 1092.651610215 1092.65050993586 84.476 2 -1.752010131126338 0.4408227006911217 1.0 ['ENST00000440364.6_1_5:153826115-153832963:+|nuORF', 'ENST00000426761.2_1_5:153826115-153833002:+|nuORF', 'ENST00000297109.10_1_5:153825644-153830670:+|nuORF'] 72145 19037 MFVFKERWFWR True NCI_RA007_Epitope_Rep1 1630.8231092975398 1630.82146490379 78.19 3 -1.7521175179417985 0.44083996943149223 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 62531 22115 LLKCLKDFAFN True PC9_epitope_Rep5 1310.7056795034598 1310.7045899358602 90.1 2 -1.7523011403429187 0.44085723778934544 1.0 ['ENSG00000181381|ENST00000682922|DDX60L'] 136827 19707 YACFVYRIL True PC9_epitope_Rep4 1146.5895871220598 1146.58848993586 83.926 2 -1.75248444521582 0.44087450576469417 1.0 ['ENST00000503787.5_1_5:54460591-54460681:+|nuORF'] 59504 12265 LFRMLIRLL True NCI_RA007_Epitope_Rep1 1173.74200544253 1173.7403549037901 51.679 3 -1.752769713283278 0.4409341571988572 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 75486 23371 NKKSSLKG True NCI_RA007_Epitope_Rep4 860.5079656730799 860.50686993586 101.46 2 -1.7528146713380375 0.4409341571988572 1.0 ['nc|ENSG00000166833|Q8IVL1-4|NAV2', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 34618 22805 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 94.161 2 -1.7528599416829211 0.4409341571988572 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 73430 9509 MTYLYEDSN True H1975_Epitope_Rep1 1134.45394106454 1134.45284993586 41.496 2 -1.7528980023701457 0.4409341571988572 1.0 ['ENST00000217398.3_1_20:32295514-32298573:-|nuORF', 'ENSG00000101417|ENST00000409299|PXMP4'] 66574 20564 LSIIPQEPV True PC9_epitope_Rep6 994.5698972232999 994.56880993586 91.828 2 -1.7529231406016774 0.4409341571988572 1.0 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 93827 16533 RRCCPRWP True NCI_RA007_Epitope_Rep3 1072.5171079714798 1072.5160099358602 72.827 2 -1.7529244167470528 0.4409341571988572 1.0 ['ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 88445 23730 QSQLREKKYLE True PC9_epitope_Rep1 1420.76742781288 1420.76632993586 96.07 2 -1.7530013379484095 0.4409341571988572 1.0 ['ENSG00000196604|ENST00000409914|POTEF'] 25224 12040 FDFGWGVL True NCI_RA007_Epitope_Rep2 939.4490538146298 939.44794993586 51.425 2 -1.7530840733049018 0.4409341571988572 1.0 ['ENST00000397269.7_1_10:5969416-5978510:+|nuORF'] 125363 16606 VIQWQRISEWK True NCI_RA007_Epitope_Rep1 1471.79358299107 1471.7924899358602 68.712 2 -1.7531939809798893 0.4409341571988572 1.0 ['ENST00000556551.2_1_14:74325599-74340738:+|nuORF'] 135293 20748 WFVLTIIFITG True PC9_epitope_Rep6 1308.7481959384397 1308.7465649037902 92.566 3 -1.7532742098384806 0.4409341571988572 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'PIEZO2|p.N2125Tfs*10|1|0.09|ENSG00000154864|chr18:10697862-10697862|T/-|frameshift_variant', 'PIEZO2|p.S2477Lfs*18|1|0.26|ENSG00000154864|chr18:10681672-10681672|A/-|frameshift_variant'] 64439 13284 LPPAAINLL True PC9_epitope_Rep5 920.56950330048 920.56840993586 56.107 2 -1.7533607321902418 0.4409341571988572 1.0 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1'] 89274 19934 QVVSLFWKLFM True NCI_RA007_Epitope_Rep2 1396.7577150763198 1396.75660993586 82.539 2 -1.753386039473916 0.4409341571988572 1.0 ['ENST00000260818.10_1_3:132233460-132235298:+|nuORF'] 105338 22305 SRPRKIVDR True H1975_Epitope_Rep2 1125.6730739355698 1125.67141490379 92.18 3 -1.7534097749457007 0.4409341571988572 1.0 ['nc|ENSG00000049449|Q15293-2|RCN1'] 119149 21739 VAIGRRDL True PC9_epitope_Rep4 898.5348491272599 898.53374993586 91.814 2 -1.7534472791017577 0.4409341571988572 1.0 ['PLEKHO2-ANKDD1A|6|fusion', 'PLEKHO2-ANKDD1A|5|fusion', 'PLEKHO2-ANKDD1A|4|fusion', 'nc|ENSG00000166839|Q495B1-2|ANKDD1A', 'PLEKHO2-ANKDD1A|3|fusion', 'nc|ENSG00000166839|Q495B1-1|ANKDD1A', 'ENSG00000166839|ENST00000319580|ANKDD1A', 'PLEKHO2-ANKDD1A|2|fusion', 'PLEKHO2-ANKDD1A|1|fusion'] 79770 16646 PEDCGQPGS True H1975_Epitope_Rep2 888.3283466286 888.32724993586 69.259 2 -1.7535167894061254 0.4409341571988572 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 59980 6057 LGHRKQYG True PC9_epitope_Rep6 957.5144480358499 957.51334993586 31.671 2 -1.7536594329350965 0.44093712286451353 1.0 ['ENSG00000204361|ENST00000389586|NXPE2', 'nc|ENSG00000204361|Q96DL1-3|NXPE2'] 19445 12878 ELNHWRYIYPL True H1975_Epitope_Rep3 1502.76703389006 1502.7659299358602 54.76 2 -1.7537601819123572 0.44093712286451353 1.0 ['ENST00000468057.5_1_1:205760663-205770562:-|nuORF', 'ENSG00000133065|ENST00000367137|SLC41A1'] 93946 17658 RRHILRPG True NCI_RA007_Epitope_Rep4 1003.6151651366298 1003.61406993586 76.402 2 -1.7538189207796324 0.44093712286451353 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 132077 3391 VTTNTTVP True NCI_RA007_Epitope_Rep2 831.43379767331 831.43270993586 17.849 2 -1.7538568573736861 0.44093712286451353 1.0 ['ENSG00000257743|ENST00000477922|MGAM2'] 80058 4363 PFKHDVFLLE True PC9_epitope_Rep5 1243.6601092100298 1243.6584749037902 21.853 3 -1.7540477880667233 0.44093712286451353 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 122678 14977 VGGFDGST True NCI_RA007_Epitope_Rep3 738.3184335679 738.31788496793 66.355 1 -1.7541117783313982 0.44093712286451353 1.0 ['nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'nc|ENSG00000109466|O95198-3|KLHL2', 'ENSG00000109466|ENST00000226725|KLHL2', 'nc|ENSG00000109466|O95198-2|KLHL2'] 124170 18233 VGSTQRFFQG True PC9_epitope_Rep4 1125.55670677065 1125.5550749037902 78.203 3 -1.7541297423712439 0.44093712286451353 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 81218 25490 PKGTTILTSLT True PC9_epitope_Rep1 1130.65468947642 1130.65358993586 103.04 2 -1.7541440529459402 0.44093712286451353 1.0 ['ENSG00000165841|ENST00000371321|CYP2C19'] 122812 16926 VGGRLRSK True NCI_RA007_Epitope_Rep2 871.53518348043 871.5346349679301 70.577 1 -1.7541647636531499 0.44093712286451353 1.0 ['ENST00000563255.1_1_16:65157712-65157874:-|nuORF'] 98708 24888 SGGGDMGP True H1975_Epitope_Rep3 676.24863975592 676.24809496793 103.53 1 -1.7542180158620875 0.44093712286451353 1.0 ['ENST00000282388.3_2_2:43451217-43451442:-|nuORF'] 87911 6437 QRKAAGPV True PC9_epitope_Rep3 825.4820852784098 825.48098993586 29.785 2 -1.75423391542058 0.44093712286451353 1.0 ['ENST00000464148.2_1_1:228296563-228296986:-|nuORF'] 89885 3199 RCAPRGKA True PC9_epitope_Rep1 857.4653896684499 857.46428993586 17.185 2 -1.7542429760757101 0.44093712286451353 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 79968 6306 PETQTGPL True PC9_epitope_Rep3 841.4181476091699 841.41704993586 29.287 2 -1.7542500846400386 0.44093712286451353 1.0 ['ZP4|p.P312T|1|0.12|ENSG00000116996|chr1:237885792-237885792|G/T|missense_variant'] 113882 23430 TNPTAKRQFVQ True PC9_epitope_Rep2 1288.68878356936 1288.68712490379 95.597 3 -1.7543758289802303 0.4409495023305765 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 140388 16665 YREGRRRA True PC9_epitope_Rep5 1062.5795079038999 1062.57897496793 69.107 1 -1.7543955030553013 0.4409495023305765 1.0 ['ENST00000357066.7_1_19:2085254-2096298:-|nuORF'] 10576 19935 CMSVIVSC True NCI_RA007_Epitope_Rep5 840.35436777776 840.35326993586 83.594 2 -1.7544937328175534 0.4409618812484085 1.0 ['ENSG00000187123|ENST00000334166|LYPD6'] 29624 27045 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 111.25 3 -1.7545182953387035 0.4409618812484085 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 16424 7929 EEKPKQDP True H1975_Epitope_Rep2 969.4767251144499 969.4761749679301 35.444 1 -1.7548471975695512 0.4409742596180459 1.0 ['ENSG00000031081|ENST00000264245|ARHGAP31'] 123359 22760 VGLYFIKIL True PC9_epitope_Rep3 1064.66340368532 1064.66230993586 92.815 2 -1.7548516277305668 0.4409742596180459 1.0 ['ENSG00000115232|ENST00000397033|ITGA4', 'ENST00000476824.1_1_2:182363351-182392165:+|nuORF'] 19916 19948 ELVDVFVYK True PC9_epitope_Rep5 1110.5961119711399 1110.5950099358602 81.785 2 -1.755053287775314 0.44099770832641405 1.0 ['ENST00000242465.3_1_10:70864372-70864540:+|nuORF'] 139775 26323 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 107.09 3 -1.7550669509107546 0.44099770832641405 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 6086 6663 APLQKAQIVR True PC9_epitope_Rep2 1122.6873270173799 1122.68569490379 31.034 3 -1.7552615912939948 0.4410162736632348 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'ATP11C|p.T977Lfs*10|1|0.31|ENSG00000101974|chrX:139745767-139745767|C/-|frameshift_variant'] 48261 25414 IYQQLVRGRKI True PC9_epitope_Rep1 1372.8303028529597 1372.82920993586 102.73 2 -1.7553974796222658 0.4410162736632348 1.0 ['ENSG00000078401|ENST00000379375|EDN1'] 42873 6739 IEQSSQAY True H1975_Epitope_Rep2 924.4188758851599 924.41776993586 30.836 2 -1.7554147739928871 0.4410162736632348 1.0 ['CCDC63|p.R273Afs*39|1|0.36|ENSG00000173093|chr12:110881260-110881260|C/-|frameshift_variant', 'nc|ENSG00000173093|Q8NA47-2|CCDC63', 'ENSG00000173093|ENST00000308208|CCDC63'] 83028 10948 PSKKGASS True NCI_RA007_Epitope_Rep3 760.4079172786401 760.40682993586 50.15 2 -1.7555106869431318 0.44103353223145986 1.0 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 23216 10937 EVLYFPDRWWH True H1975_Epitope_Rep3 1546.7357337617798 1546.73462993586 47.156 2 -1.7559322475544654 0.44110614178807067 1.0 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000569441.5_1_16:732796-733478:-|nuORF'] 121097 8659 VERFRYGW True PC9_epitope_Rep6 1111.5563128478298 1111.5552099358601 43.142 2 -1.75603308498715 0.44111623994066795 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1', 'nc|ENSG00000167525|Q8NCQ7-3|PROCA1'] 140151 9488 YQRYLIFFF True H1975_Epitope_Rep3 1295.6702799709099 1295.66918993586 41.5 2 -1.7560563048040092 0.44111623994066795 1.0 ['ENST00000502773.5_1_4:157683422-157683533:-|nuORF'] 35183 9595 GRAAAAIPT True PC9_epitope_Rep4 826.4661008611 826.4655549679301 44.533 1 -1.7561399432591054 0.44111623994066795 1.0 ['ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 26285 21226 FHGGLYDP True NCI_RA007_Epitope_Rep5 904.4079172786398 904.40682993586 88.683 2 -1.7562388620473641 0.44111623994066795 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 29601 24323 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 105.52 3 -1.7562566685279104 0.44111623994066795 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 94108 23244 RRLLLALHRR True PC9_epitope_Rep6 1302.8472903297798 1302.8461899358601 102.51 2 -1.7562666504586235 0.44111623994066795 1.0 ['DISP2|p.L758Cfs*39|1|0.16|ENSG00000140323|chr15:40368383-40368383|C/-|frameshift_variant', 'DISP2|p.D885Mfs*67|1|0.19|ENSG00000140323|chr15:40368761-40368761|C/-|frameshift_variant', 'ENSG00000140323|ENST00000267889|DISP2'] 119788 345 VCKRWRQEW True NCI_RA007_Epitope_Rep5 1289.64514493557 1289.64349490379 1.993 3 -1.7563305066152866 0.44111623994066795 1.0 ['ENST00000443615.1_1_1:21112682-21113015:-|nuORF'] 127896 14580 VPGLGPAVEAF True PC9_epitope_Rep1 1055.56514619603 1055.56404993586 60.905 2 -1.7566095704257911 0.4411507510432694 1.0 ['SLC22A1|p.G81V|1|0.23|ENSG00000175003|chr6:160122177-160122177|G/T|missense_variant'] 38787 21227 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 87.852 2 -1.7567396604052483 0.4411507510432694 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 78892 5821 PAGCGGKG True NCI_RA007_Epitope_Rep2 645.29044499825 645.2898949679301 27.261 1 -1.7570291850975968 0.44115693697283653 1.0 ['ENSG00000188895|ENST00000398532|MSL1'] 72751 21694 MNNSLAQLTF True PC9_epitope_Rep6 1137.54884450889 1137.5471849037901 96.333 3 -1.757231122526505 0.4411719130473281 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 96588 10918 SAGASGSK True H1975_Epitope_Rep1 663.31876792107 663.3182149679301 46.959 1 -1.757263777449021 0.4411719130473281 1.0 ['ENSG00000198837|ENST00000361217|DENND4B', 'ENST00000480340.1_1_1:153904922-153905273:-|nuORF', 'ENST00000462423.1_1_1:153904922-153905503:-|nuORF'] 36957 4411 GVMDQRILE True H1975_Epitope_Rep1 1059.5382798251899 1059.5371899358602 21.975 2 -1.7572680899574955 0.4411719130473281 1.0 ['AXDND1|p.R313G|1|0.11|ENSG00000162779|chr1:179393976-179393976|C/G|missense_variant'] 138647 13797 YIGLPRALP True H1975_Epitope_Rep3 998.5913013742199 998.59020993586 58.374 2 -1.7573354019970662 0.4411719130473281 1.0 ['ENSG00000174326|ENST00000574600|SLC16A11', 'nc|ENSG00000174326|Q8NCK7|SLC16A11'] 33118 7795 GISDRSIELEW True NCI_RA007_Epitope_Rep3 1303.6408303174298 1303.63972993586 37.785 2 -1.7573463246194645 0.4411719130473281 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.K1083Qfs*87|1|0.22|ENSG00000116147|chr1:175355505-175355506|-/G|frameshift_variant', 'TNR|p.R569Dfs*85|1|0.22|ENSG00000116147|chr1:175386104-175386104|G/-|frameshift_variant'] 89991 7070 RDLESKDEVP True NCI_RA007_Epitope_Rep1 1186.58298108814 1186.58188993586 31.496 2 -1.7573941347850746 0.4411719130473281 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 67536 11107 LSTLRDLQFPV True H1975_Epitope_Rep1 1287.7186867153098 1287.7175899358601 47.687 2 -1.757562884057972 0.4411891664545263 1.0 ['RPP40|p.C219F|1|0.08|ENSG00000124787|chr6:4996324-4996324|C/A|missense_variant'] 93932 11894 RRGRAPLSSA True PC9_epitope_Rep4 1069.6104736790098 1069.60936993586 53.525 2 -1.757588082349021 0.44119665309013634 1.0 ['ENST00000396958.7_2_16:2933286-2946389:+|nuORF'] 125525 20222 VKFGKKCWRK True NCI_RA007_Epitope_Rep3 1278.7383170444198 1278.7372099358602 88.105 2 -1.757593683720849 0.44119665309013634 1.0 ['nc|ENSG00000146094|Q7L591-3|DOK3', 'ENSG00000146094|ENST00000510898|DOK3', 'nc|ENSG00000146094|Q7L591|DOK3'] 1765 16340 AEGTARQPLPI True PC9_epitope_Rep1 1151.6298717109098 1151.6287699358602 67.671 2 -1.7576204453844957 0.44119665309013634 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 43204 17155 IFIFSAFIQVF True NCI_RA007_Epitope_Rep3 1330.7325458743 1330.7314499358602 75.364 2 -1.7576909365500772 0.4411979547114682 1.0 ['nc|ENSG00000213439|P0C628|OR5AC1'] 125154 24755 VIGQQLRRLPK True NCI_RA007_Epitope_Rep5 1306.8197381692596 1306.81864993586 102.71 2 -1.7577132289625754 0.4411979547114682 1.0 ['PAQR8|p.S15I|1|0.12|ENSG00000170915|chr6:52403257-52403257|G/T|missense_variant'] 6093 16737 APLSTPLAP True PC9_epitope_Rep2 865.4909186266099 865.49037496793 69.626 1 -1.7577403850791 0.4412041392285983 1.0 ['ENST00000308018.8_1_19:39423336-39423570:+|nuORF'] 140695 16124 YRYCYLNWDHY True H1975_Epitope_Rep2 1594.66633387262 1594.66522993586 67.234 2 -1.7577959541753816 0.44121032360883616 1.0 ['nc|ENSG00000163354|Q5T1A1-2|DCST2', 'ENSG00000163354|ENST00000368424|DCST2'] 50090 12030 KKHQNMYRLAM True H1975_Epitope_Rep2 1418.7274946605398 1418.7263899358602 51.354 2 -1.7582017609631726 0.4412327781773917 1.0 ['nc|ENSG00000205560|Q92523-4|CPT1B', 'nc|ENSG00000205560|Q92523-3|CPT1B', 'ENSG00000205560|ENST00000312108|CPT1B'] 104571 22050 SQQRLVQLV True PC9_epitope_Rep4 1069.62439240765 1069.6232899358602 93.036 2 -1.7583113471944445 0.4412327781773917 1.0 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 16009 10205 EDSQWEEILKQ True NCI_RA007_Epitope_Rep2 1403.6568743043897 1403.65576993586 44.284 2 -1.758318745117998 0.4412327781773917 1.0 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'ENST00000548668.1_1_1:220240634-220247398:-|nuORF'] 33991 17185 GLSVRWRRPLR True NCI_RA007_Epitope_Rep2 1394.8371195688999 1394.83602993586 71.585 2 -1.758410309570187 0.4412327781773917 1.0 ['ENST00000561241.1_1_15:63340374-63341172:-|nuORF'] 18555 23323 EKLSSSIQVKK True PC9_epitope_Rep2 1245.7292513990099 1245.72760490379 95.185 3 -1.7584482458127966 0.4412327781773917 1.0 ['ENSG00000144597|ENST00000396842|EAF1'] 19835 11580 ELSSAAGLP True PC9_epitope_Rep5 843.43379767331 843.43324496793 49.537 1 -1.758460692228956 0.4412327781773917 1.0 ['nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'ENSG00000061676|ENST00000361354|NCKAP1'] 58448 23817 LEPLILYLM True PC9_epitope_Rep4 1103.63005495171 1103.6289499358602 100.03 2 -1.758525922306233 0.4412327781773917 1.0 ['ENST00000435236.2_1_X:98974480-98975440:-|nuORF'] 107757 6824 SVSREFSL True PC9_epitope_Rep2 923.47124581119 923.47014993586 31.654 2 -1.7586593898975924 0.4412327781773917 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 100152 15694 SITNKKLQ True PC9_epitope_Rep2 930.5498304850598 930.54872993586 65.643 2 -1.758704404497911 0.4412327781773917 1.0 ['ENST00000374754.8_1_10:35328003-35333570:-|nuORF'] 63142 8477 LLRLCKEA True NCI_RA007_Epitope_Rep2 944.54772231008 944.54662993586 37.618 2 -1.7589697105672866 0.44126109377420714 1.0 ['ENSG00000138606|ENST00000690270|SHF', 'nc|ENSG00000138606|Q7M4L6|SHF', 'nc|ENSG00000138606|Q7M4L6-2|SHF', 'ENST00000558685.1_1_15:45464079-45464229:-|nuORF'] 53728 22277 KSLSEKRENV True PC9_epitope_Rep6 1188.64625005104 1188.64459490379 98.658 3 -1.7592371964681546 0.4413558046632067 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 115954 16531 TSHLETPTV True PC9_epitope_Rep1 983.49237517859 983.49126993586 68.41 2 -1.7593633573995038 0.4413571025462271 1.0 ['SVIL|p.S675L|1|0.13|ENSG00000197321|chr10:29531274-29531274|G/A|missense_variant'] 3761 5420 AGSVPHFNRN True NCI_RA007_Epitope_Rep4 1097.5366400324099 1097.5355499358602 27.423 2 -1.7594116545141516 0.4413571025462271 1.0 ['PARP14|p.V1692F|1|0.36|ENSG00000173193|chr3:122727944-122727944|G/T|missense_variant'] 127332 23631 VMLALPSV True NCI_RA007_Epitope_Rep4 828.47791141476 828.47680993586 102.5 2 -1.759493938403846 0.4413632842757552 1.0 ['nc|ENSG00000115685|Q15435-2|PPP1R7', 'ENSG00000115685|ENST00000234038|PPP1R7', 'SNED1-PPP1R7|1|fusion'] 68226 12035 LTEAEQREL True PC9_epitope_Rep2 1087.55095268387 1087.54984993586 51.609 2 -1.7595665330157857 0.44136946586847553 1.0 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2'] 129602 22284 VRNRRLHYPI True PC9_epitope_Rep6 1322.76837130274 1322.7667349037902 98.688 3 -1.7597317545247204 0.4414065525520874 1.0 ['ENST00000590244.1_1_17:58543761-58603427:-|nuORF'] 18512 5142 EKHFQREEQER True NCI_RA007_Epitope_Rep2 1514.7226028787798 1514.72150993586 24.621 2 -1.759798774635147 0.4414065525520874 1.0 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7', 'nc|ENSG00000135525|Q14244-5|MAP7', 'nc|ENSG00000135525|Q14244-3|MAP7'] 104385 17124 SQKILTHR True NCI_RA007_Epitope_Rep4 981.5719629119701 981.57086993586 74.184 2 -1.7598447384161209 0.4414065525520874 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant', 'PIK3AP1|p.E50Rfs*9|1|0.18|ENSG00000155629|chr10:96709850-96709850|G/-|frameshift_variant'] 136730 23756 WYFYIQAY True H1975_Epitope_Rep2 1152.5280324113198 1152.52639490379 97.878 3 -1.7599325849855045 0.4414065525520874 1.0 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A'] 10814 4295 CSLWRCVWEL True NCI_RA007_Epitope_Rep5 1293.59983453593 1293.59818490379 23.106 3 -1.7599443515055682 0.4414065525520874 1.0 ['ENST00000592839.6_1_19:2243417-2245742:+|nuORF'] 21339 19248 ERFLGRNSMEA True NCI_RA007_Epitope_Rep5 1308.6244690606402 1308.6228149037902 80.902 3 -1.7599622726672512 0.4414065525520874 1.0 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF'] 65517 24696 LRPRNEQRE True PC9_epitope_Rep2 1196.63741670284 1196.63687496793 100.67 1 -1.760048277738322 0.4414127331872801 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'TBC1D1|p.P709Hfs*44|1|0.41|ENSG00000065882|chr4:38090002-38090002|C/-|frameshift_variant'] 126059 5564 VLEEGVLNPE True NCI_RA007_Epitope_Rep2 1097.5604547384098 1097.5593499358602 26.258 2 -1.7601401648288413 0.4414189136857013 1.0 ['ENSG00000138801|ENST00000265174|PAPSS1'] 111685 23284 TIETVLRR True PC9_epitope_Rep1 986.5872786229398 986.58618993586 94.349 2 -1.7602150475946623 0.44144722283691085 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ATG2B|p.E1224Dfs*7|1|0.12|ENSG00000066739|chr14:96313406-96313407|-/A|frameshift_variant', 'ATG2A|p.M1751Cfs*132|1|0.13|ENSG00000110046|chr11:64896770-64896770|G/-|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 29116 13148 FTLGSKLS True PC9_epitope_Rep5 851.47526856247 851.47416993586 55.578 2 -1.760578454101875 0.4415229583089057 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 55766 21464 LALYKKGE True NCI_RA007_Epitope_Rep5 920.5331177917599 920.53202993586 89.629 2 -1.7606144810039275 0.4415229583089057 1.0 ['IGSF1|p.K1066Nfs*5|1|0.23|ENSG00000147255|chrX:131275276-131275276|G/-|frameshift_variant', 'nc|ENSG00000147255|Q8N6C5-2|IGSF1', 'ENSG00000147255|ENST00000361420|IGSF1', 'nc|ENSG00000147255|Q8N6C5-4|IGSF1'] 25790 7499 FEVTLGGV True NCI_RA007_Epitope_Rep1 820.4330693973199 820.43196993586 33.16 2 -1.7607283930166253 0.4415229583089057 1.0 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF'] 80346 20434 PGGHSCLV True NCI_RA007_Epitope_Rep5 768.35885891124 768.35776993586 85.536 2 -1.760728941446045 0.4415229583089057 1.0 ['ENST00000460804.5_1_1:21048287-21050865:-|nuORF', 'nc|ENSG00000189410|Q6ZV89-2|SH2D5', 'ENSG00000189410|ENST00000444387|SH2D5'] 126568 20861 VLLRTRPVVI True PC9_epitope_Rep6 1164.7706627185198 1164.76956993586 93.015 2 -1.760753241426606 0.4415229583089057 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 133038 20786 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 86.068 2 -1.7607949723203382 0.4415229583089057 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 5718 2680 APAPAPAVTG True PC9_epitope_Rep3 850.45486747106 850.45376993586 14.786 2 -1.7609834065170056 0.4415229583089057 1.0 ['TBC1D10B|p.G693Rfs*7|1|0.2|ENSG00000169221|chr16:30358295-30358296|-/G|frameshift_variant', 'ENSG00000169221|ENST00000409939|TBC1D10B'] 114212 5225 TPLSAAAHTH True PC9_epitope_Rep4 1004.5039429218 1004.5033749679301 26.798 1 -1.7610503839310612 0.4415229583089057 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 47621 19638 IVYLYTKKV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 81.477 3 -1.761109228031304 0.4415229583089057 1.0 ['ENST00000503574.1_1_4:109543115-109543474:+|nuORF', 'ENSG00000109475|ENST00000394667|RPL34'] 53582 17854 KRRKHQVP True NCI_RA007_Epitope_Rep4 1047.64137988447 1047.64087496793 77.302 1 -1.7611281135540764 0.4415229583089057 1.0 ['ENST00000272462.2_1_2:110873982-110874102:-|nuORF'] 91736 17912 RKEKKKTS True NCI_RA007_Epitope_Rep5 1003.6138277239498 1003.61272993586 75.693 2 -1.7611859653258741 0.4415229583089057 1.0 ['nc|ENSG00000118096|Q9NQC8-2|IFT46'] 56940 15632 LDQMFDAEIL True PC9_epitope_Rep5 1193.56382586669 1193.56219490379 65.139 3 -1.7614401370950101 0.4415229583089057 1.0 ['ENSG00000204070|ENST00000243918|SYS1', 'nc|ENSG00000204070|Q8N2H4-2|SYS1', 'ENST00000461890.1_1_20:43991814-43994327:+|nuORF'] 133040 21116 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 87.4 2 -1.7614633331593437 0.4415229583089057 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 87331 23506 QPRVQRPRPRR True PC9_epitope_Rep5 1444.8599802717997 1444.8588899358601 95.398 2 -1.761479064122839 0.4415229583089057 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 14875 6862 DWKELYRKRHI True NCI_RA007_Epitope_Rep1 1542.84193016582 1542.84028490379 30.697 3 -1.7614955945757158 0.4415229583089057 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 91834 25680 RKKKGRGPF True NCI_RA007_Epitope_Rep2 1072.6617809758798 1072.66068993586 108.65 2 -1.7615516417881387 0.4415229583089057 1.0 ['ENSG00000162231|ENST00000294172|NXF1', 'ENST00000527064.1_1_11:62571265-62572828:-|nuORF', 'NXF1|p.R78Dfs*59|1|0.72|ENSG00000162231|chr11:62803556-62803556|G/-|frameshift_variant', 'nc|ENSG00000162231|Q9UBU9-2|NXF1'] 92144 6244 RLEECHPSGCL True H1975_Epitope_Rep3 1242.54852723906 1242.54742993586 29.029 2 -1.761552611126315 0.4415229583089057 1.0 ['nc|ENSG00000134343|Q9BYT9-2|ANO3', 'ANO3|p.Y843Lfs*12|1|0.08|ENSG00000134343|chr11:26647808-26647808|A/-|frameshift_variant', 'ENSG00000134343|ENST00000256737|ANO3', 'nc|ENSG00000151572|Q32M45-3|ANO4', 'nc|ENSG00000151572|Q32M45-2|ANO4', 'ENSG00000151572|ENST00000392977|ANO4'] 126058 5598 VLEEGVLNPE True NCI_RA007_Epitope_Rep1 1097.5604547384098 1097.5593499358602 25.84 2 -1.7615557659945051 0.4415229583089057 1.0 ['ENSG00000138801|ENST00000265174|PAPSS1'] 14870 7590 DWENTDWF True H1975_Epitope_Rep3 1111.42468954159 1111.42417496793 34.177 1 -1.7616398292675561 0.4415229583089057 1.0 ['PEAK1-TSPAN3|1|fusion', 'PEAK1-TSPAN3|2|fusion', 'TSPAN3|p.E164Q|1|0.2|ENSG00000140391|chr15:77052872-77052872|C/G|missense_variant', 'nc|ENSG00000140391|O60637-3|TSPAN3', 'nc|ENSG00000140391|O60637-2|TSPAN3', 'ENSG00000140391|ENST00000267970|TSPAN3'] 79947 2833 PESLPATK True PC9_epitope_Rep1 841.45453311789 841.45342993586 15.474 2 -1.761684690826397 0.4415229583089057 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 120154 19366 VEAMVIREL True H1975_Epitope_Rep2 1058.57941636118 1058.57830993586 80.382 2 -1.7618259428614265 0.4415229583089057 1.0 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 109523 9011 TDQFTITMW True NCI_RA007_Epitope_Rep1 1141.5113963710098 1141.51028993586 39.053 2 -1.7618506075873857 0.4415229583089057 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant'] 103474 9634 SPQEVLSPA True PC9_epitope_Rep2 926.4709114580198 926.4703649679301 42.399 1 -1.7618844563819165 0.4415229583089057 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 82220 8640 PPAPFGCP True NCI_RA007_Epitope_Rep5 784.3577962820799 784.35724496793 39.906 1 -1.7620816770681726 0.4415525518217817 1.0 ['ENSG00000090470|ENST00000204549|PDCD7'] 97060 12183 SDDSSREDEH True H1975_Epitope_Rep2 1175.43268802599 1175.43158993586 51.943 2 -1.7621013773460608 0.4415525518217817 1.0 ['FBXW7|p.A252Lfs*2|1|0.21|ENSG00000109670|chr4:152337910-152337910|A/-|frameshift_variant', 'ENSG00000109670|ENST00000281708|FBXW7'] 92673 21611 RNPVSMET True PC9_epitope_Rep6 932.43856578392 932.43746993586 96.005 2 -1.762147644596578 0.4415525518217817 1.0 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 139708 12374 YNLYIVENPHY True PC9_epitope_Rep4 1423.6772158261501 1423.67610993586 55.403 2 -1.7622731044976445 0.4415613144418268 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 37993 2824 HALFPGGK True PC9_epitope_Rep5 825.4497225209699 825.44862993586 15.549 2 -1.7623314025781645 0.4415613144418268 1.0 ['nc|ENSG00000142273|Q9ULV8-2|CBLC', 'ENSG00000142273|ENST00000647358|CBLC'] 97138 19541 SDPLGHCP True NCI_RA007_Epitope_Rep5 824.34868815036 824.34758993586 82.056 2 -1.762348309878187 0.4415613144418268 1.0 ['ENST00000495313.5_2_9:131038987-131046858:+|nuORF'] 85666 16887 QGRKPQPK True NCI_RA007_Epitope_Rep5 937.5457481641298 937.54464993586 71.711 2 -1.7624728097489983 0.4415613144418268 1.0 ['ENST00000497401.1_1_22:18049955-18062711:+|nuORF', 'ENST00000327451.10_1_22:18043359-18062711:+|nuORF'] 82348 23301 PPLEPGRR True PC9_epitope_Rep2 920.5191990631199 920.51810993586 95.112 2 -1.7624780586010902 0.4415613144418268 1.0 ['ENST00000392197.6_1_19:36206342-36206675:+|nuORF'] 59172 25165 LFALNPQS True PC9_epitope_Rep5 888.4705175352001 888.46942993586 101.94 2 -1.762559785714563 0.4415626071472023 1.0 ['PCDHGA5|p.R80Q|2|0.1|ENSG00000253485|chr5:141364569-141364569|G/A|missense_variant'] 103478 8571 SPQEVLSPA True PC9_epitope_Rep6 926.4709114580198 926.4703649679301 42.746 1 -1.762564842866395 0.4415626071472023 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 38196 17240 HDSLFLAC True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 73.088 2 -1.762700545020223 0.44157883677464305 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 35335 20655 GRRRWSAL True PC9_epitope_Rep2 1000.5678805910399 1000.56678993586 84.886 2 -1.7628486558464271 0.44157883677464305 1.0 ['ENST00000383721.8_1_3:52802453-52802501:-|nuORF'] 19741 23716 ELRTRSAKKRR True PC9_epitope_Rep1 1399.8484125285897 1399.84730993586 96.017 2 -1.7628785401225617 0.44157883677464305 1.0 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 15775 6434 EDAERREREER True H1975_Epitope_Rep3 1473.6920310264902 1473.6909299358601 29.725 2 -1.7629615431170536 0.44157883677464305 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 16421 6564 EEKLLHGLD True NCI_RA007_Epitope_Rep2 1052.5502244078798 1052.54912993586 30.144 2 -1.7629873502249167 0.44157883677464305 1.0 ['MME|p.P676H|1|0.42|ENSG00000196549|chr3:155172163-155172163|C/A|missense_variant'] 72397 27373 MKKIMKKRKF True PC9_epitope_Rep1 1336.8199384933998 1336.81884993586 111.89 2 -1.7630046925959686 0.44157883677464305 1.0 ['ENSG00000206536|ENST00000383695|OR5K3'] 4252 17140 AIDSREDPV True PC9_epitope_Rep5 1000.48253877088 1000.48144993586 70.95 2 -1.763042522785847 0.44157883677464305 1.0 ['CASP14|p.D193Efs*14|1|0.09|ENSG00000105141|chr19:15055488-15055488|T/-|frameshift_variant', 'ENSG00000105141|ENST00000427043|CASP14'] 142416 9602 YYFCRWYRNRK True H1975_Epitope_Rep1 1653.7986854548496 1653.79758993586 41.859 2 -1.7631927874585975 0.44157883677464305 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 125823 7829 VLAAPVPP True PC9_epitope_Rep1 762.46397560278 762.46286993586 34.941 2 -1.7632982264983093 0.4415850124969587 1.0 ['ENST00000531243.2_1_1:40041622-40042411:-|nuORF'] 112574 8697 TLELGDRTA True PC9_epitope_Rep2 974.5032742154599 974.50216993586 38.816 2 -1.7633178455787673 0.4416022472158632 1.0 ['PDZD2|p.S2678Hfs*5|1|0.32|ENSG00000133401|chr5:32098446-32098446|C/-|frameshift_variant', 'ENSG00000133401|ENST00000438447|PDZD2', 'nc|ENSG00000133401|O15018-2|PDZD2', 'ENST00000502489.5_1_5:31983264-32077762:+|nuORF'] 29600 24251 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 105.18 3 -1.7634645700693792 0.44163800634766165 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 21560 20121 ERPKELVRKP True H1975_Epitope_Rep2 1250.7459045226597 1250.74426490379 83.383 3 -1.7634923917938274 0.44163800634766165 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16'] 122560 6459 VGFAEAAR True PC9_epitope_Rep3 819.4239016959499 819.42280993586 29.87 2 -1.7635876818562357 0.44163800634766165 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 71611 23436 MDKKAYFL True PC9_epitope_Rep2 1014.5208388558998 1014.51974993586 95.618 2 -1.7636065752381134 0.44163800634766165 1.0 ['ENST00000338086.9_1_2:20512115-20518378:-|nuORF'] 20331 5138 ENVMWLKPE True H1975_Epitope_Rep1 1144.5586809166 1144.55758993586 24.831 2 -1.7636631017318525 0.44164418100588315 1.0 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1'] 98537 7319 SFNPIISSQ True H1975_Epitope_Rep3 991.4974605590301 991.49636993586 33.126 2 -1.7638033372627537 0.44165680735081103 1.0 ['nc|ENSG00000141576|Q96PX1-2|RNF157', 'ENSG00000141576|ENST00000269391|RNF157'] 907 11051 ADLRAHRRT True H1975_Epitope_Rep3 1094.6057226517398 1094.6046299358602 47.598 2 -1.7638369078283211 0.44165680735081103 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 54279 25586 KWSILRER True PC9_epitope_Rep5 1086.62981214126 1086.6287099358601 103.72 2 -1.7639588050876167 0.44165680735081103 1.0 ['ENST00000523958.5_1_8:23291828-23307413:-|nuORF', 'nc|ENSG00000197217|Q9Y227-2|ENTPD4', 'ENSG00000197217|ENST00000358689|ENTPD4', 'ENST00000522913.1_1_8:23292193-23294641:-|nuORF'] 74444 4444 NEVDLLGPNQ True NCI_RA007_Epitope_Rep4 1097.53530261973 1097.5342099358602 23.463 2 -1.7639643873738498 0.44165680735081103 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 45404 16931 IQETIVPKEPP True NCI_RA007_Epitope_Rep2 1249.6918032611297 1249.69070993586 70.595 2 -1.764049439981682 0.44165680735081103 1.0 ['ENSG00000099995|ENST00000215793|SF3A1'] 91485 24988 RHRRYKHT True PC9_epitope_Rep2 1152.6376914863597 1152.63604490379 101.78 3 -1.764085550181248 0.44165680735081103 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'nc|ENSG00000102974|P49711-2|CTCF', 'nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL'] 124919 24376 VHRHRQLA True PC9_epitope_Rep2 1015.57877962791 1015.57768993586 99.329 2 -1.7641115518318258 0.44165680735081103 1.0 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000553629.5_1_14:24035015-24036984:-|nuORF', 'ENST00000556277.5_1_14:24034355-24036984:-|nuORF', 'ENST00000553685.1_1_14:24036229-24036984:-|nuORF'] 122583 4111 VGFDFKWPHSQ True NCI_RA007_Epitope_Rep4 1346.64077074778 1346.6396699358602 22.096 2 -1.7641831469137923 0.44165680735081103 1.0 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1'] 64587 8963 LPSPSLPPWLC True H1975_Epitope_Rep3 1208.6263665536 1208.6252699358602 39.471 2 -1.764211079841733 0.44165680735081103 1.0 ['ENST00000367204.5_1_1:204095788-204096322:+|nuORF'] 92597 22616 RMRRNAFSI True PC9_epitope_Rep4 1149.61893018773 1149.61729490379 95.223 3 -1.7642504880797556 0.44165680735081103 1.0 ['ENSG00000170255|ENST00000526914|MRGPRX1'] 88451 9401 QSRELLRCLEE True NCI_RA007_Epitope_Rep2 1374.6925486204598 1374.6914499358602 41.176 2 -1.7642582698704115 0.44165680735081103 1.0 ['ENSG00000249115|ENST00000203166|HAUS5', 'ENST00000585968.5_1_19:36103696-36110661:+|nuORF', 'ENST00000587439.5_1_19:36108795-36110661:+|nuORF'] 4409 22697 AIPSIMNVLL True PC9_epitope_Rep3 1069.62055289717 1069.61944993586 92.573 2 -1.764295235179123 0.4416570847337697 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant'] 29599 24176 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 104.82 3 -1.7643605300930143 0.4416570847337697 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 129787 23300 VRRKFWRLGR True PC9_epitope_Rep6 1372.8316402656399 1372.83054993586 102.72 2 -1.7643644238716552 0.4416570847337697 1.0 ['ENST00000598903.5_2_10:109800211-109800896:-|nuORF'] 24907 20518 FAYLFVNI True H1975_Epitope_Rep1 985.5273041353299 985.52620993586 85.333 2 -1.7643933424397096 0.4416570847337697 1.0 ['ENSG00000189221|ENST00000338702|MAOA', 'nc|ENSG00000189221|P21397-2|MAOA'] 64119 19873 LPEGVGIP True H1975_Epitope_Rep3 780.4381547777599 780.43760496793 83.198 1 -1.7644032721245897 0.4416570847337697 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 60025 13639 LGKLEPHVF True NCI_RA007_Epitope_Rep4 1038.58621599378 1038.5851099358601 59.684 2 -1.7644983938649554 0.4416570847337697 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'MYO9B|p.Y591*|1|0.21|ENSG00000099331|chr19:17168043-17168059|ACCTGCTGGACGAGGAG/-|frameshift_variant', 'ENST00000593411.1_1_19:17213013-17214246:+|nuORF'] 139772 25108 YPEYLSNFP True PC9_epitope_Rep4 1128.51277627 1128.51112490379 105.18 3 -1.7645470816353128 0.4416570847337697 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 118171 19947 TYIRRYIL True NCI_RA007_Epitope_Rep3 1096.6393141958 1096.63820993586 86.928 2 -1.764631155386766 0.4416570847337697 1.0 ['nc|ENSG00000112414|Q86SQ4-2|ADGRG6', 'nc|ENSG00000112414|Q86SQ4|ADGRG6', 'nc|ENSG00000112414|Q86SQ4-4|ADGRG6', 'ENSG00000112414|ENST00000367609|ADGRG6'] 91281 7266 RGLHAITDREK True NCI_RA007_Epitope_Rep3 1294.7105816430997 1294.7094899358601 35.69 2 -1.7646416906104216 0.4416570847337697 1.0 ['ENSG00000179941|ENST00000650064|BBS10'] 124261 21359 VGTKRDLR True PC9_epitope_Rep6 943.5563128478299 943.55576496793 95.033 1 -1.7646567673372793 0.44165837479270315 1.0 ['ENST00000578535.1_1_18:22265891-22265996:-|nuORF'] 71194 22951 LYPAMPTP True PC9_epitope_Rep3 888.44152590604 888.44042993586 93.546 2 -1.764765723557739 0.44165837479270315 1.0 ['ENST00000590923.5_2_19:10687899-10687995:-|nuORF'] 27043 21761 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 90.819 2 -1.7649090690839602 0.44167560336535805 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 37568 11131 GVVPLTACRIY True PC9_epitope_Rep5 1190.6481646273398 1190.6465249037901 47.8 3 -1.764970044156194 0.44169283155706895 1.0 ['ENSG00000145495|ENST00000274140|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 58982 12059 LEVEELKHP True NCI_RA007_Epitope_Rep2 1092.5815245361598 1092.58097496793 51.5 1 -1.7650594886105453 0.44169412076856746 1.0 ['ENSG00000187189|ENST00000420283|TSPYL4'] 41868 6872 IAYYMITGPWR True PC9_epitope_Rep5 1369.68527841205 1369.68364490379 31.403 3 -1.7650821545791175 0.44169412076856746 1.0 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5'] 79799 15486 PEEQLPKT True PC9_epitope_Rep1 940.48656152216 940.48601496793 64.389 1 -1.7651892574294799 0.44170029296335195 1.0 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 109115 5862 TALLVIIIII True PC9_epitope_Rep5 1080.75221868972 1080.75112993586 27.541 2 -1.7653049562505847 0.4417175201202795 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 129300 16979 VQVRNPLNVR True NCI_RA007_Epitope_Rep4 1193.6992886834098 1193.69818993586 73.587 2 -1.7653385890988247 0.4417188087289129 1.0 ['ENSG00000128000|ENST00000434248|ZNF780B'] 70409 8420 LVTNNQTHR True H1975_Epitope_Rep3 1081.56285478025 1081.56174993586 37.371 2 -1.7653391922093549 0.4417188087289129 1.0 ['ASTN1|p.Q979H|1|0.11|ENSG00000152092|chr1:176894565-176894565|C/G|missense_variant'] 53770 9055 KSVPPKPA True NCI_RA007_Epitope_Rep2 822.49633836022 822.49524993586 39.825 2 -1.7653636740263312 0.44172498037785074 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 135967 9248 WQIKDLNLF True NCI_RA007_Epitope_Rep4 1175.6338944621898 1175.63224490379 42.425 3 -1.7655301132247507 0.441728845409827 1.0 ['ENSG00000257138|ENST00000547270|TAS2R38'] 53699 8052 KSGEPQSDDIE True H1975_Epitope_Rep1 1203.52552578167 1203.52497496793 35.916 1 -1.7656889479156894 0.441728845409827 1.0 ['nc|ENSG00000114062|Q05086|UBE3A'] 93926 23409 RRGKAGRA True NCI_RA007_Epitope_Rep3 870.5260157790598 870.52490993586 101.62 2 -1.7657042221150512 0.441728845409827 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614'] 81964 8716 PLTLLPAA True H1975_Epitope_Rep2 794.49019035062 794.48908993586 38.487 2 -1.7657892111894367 0.441728845409827 1.0 ['ENSG00000116903|ENST00000366645|EXOC8'] 91607 7449 RILQKLIKPP True PC9_epitope_Rep6 1204.8019628467998 1204.8008699358602 37.886 2 -1.765856391696116 0.441728845409827 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 39681 20577 HLRRCLHHP True NCI_RA007_Epitope_Rep5 1167.6195988940701 1167.6179549037902 86.09 3 -1.7659008899267714 0.441728845409827 1.0 ['ENST00000532851.1_1_1:110171948-110172194:+|nuORF'] 78808 19525 PAATILPKG True PC9_epitope_Rep2 866.5225531080599 866.52200496793 80.487 1 -1.7659400319765493 0.44173501647027613 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 119858 23896 VDFFKTGK True PC9_epitope_Rep3 940.5018176634799 940.50072993586 97.202 2 -1.7660833744599949 0.4417499336811389 1.0 ['ENSG00000180432|ENST00000316161|CYP8B1'] 133053 25876 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 109.68 2 -1.7661144730467524 0.4417499336811389 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 11205 13926 DEAVTLRVPDM True H1975_Epitope_Rep2 1244.607087661 1244.6059899358602 58.714 2 -1.7661614447292544 0.4417499336811389 1.0 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'ENSG00000006118|ENST00000453848|TMEM132A'] 137294 5369 YDASSAVL True NCI_RA007_Epitope_Rep2 824.39159850816 824.39050993586 25.502 2 -1.7662240801379887 0.4417499336811389 1.0 ['ENST00000503952.5_1_4:128606686-128637588:+|nuORF', 'nc|ENSG00000164066|Q9ULD6-4|INTU', 'ENSG00000164066|ENST00000335251|INTU'] 119973 20232 VDPNGFFLYW True PC9_epitope_Rep5 1256.5866099165999 1256.58550993586 82.87 2 -1.7663135044598761 0.4417499336811389 1.0 ['ENSG00000149782|ENST00000279230|PLCB3'] 42334 13251 IEAIELPEP True H1975_Epitope_Rep3 1009.5331773614099 1009.53267496793 56.226 1 -1.766412380997142 0.4417499336811389 1.0 ['ENSG00000120800|ENST00000261637|UTP20'] 8735 6403 AVAVAAPRP True NCI_RA007_Epitope_Rep5 850.50248636982 850.50138993586 31.301 2 -1.7665593082300293 0.4417512213453589 1.0 ['ENST00000339176.7_1_16:67918814-67919670:+|nuORF'] 72373 15898 MKEMGRNQ True PC9_epitope_Rep1 992.4531703022399 992.45206993586 65.962 2 -1.7666136408805764 0.4417512213453589 1.0 ['nc|ENSG00000160097|Q8NAU1-4|FNDC5', 'nc|ENSG00000160097|Q8NAU1-3|FNDC5', 'nc|ENSG00000160097|Q8NAU1-2|FNDC5', 'ENSG00000160097|ENST00000373471|FNDC5'] 71060 10594 LYKQLKHR True H1975_Epitope_Rep1 1084.6505475858398 1084.64944993586 45.703 2 -1.7668167642763704 0.4418016026526665 1.0 ['ENSG00000213341|ENST00000370397|CHUK'] 22638 3388 ETNKQELC[Carbamidomethyl]PMV True NCI_RA007_Epitope_Rep2 1347.6162727251399 1347.6151699358602 17.837 2 -1.7668599040676989 0.4418041755545486 1.0 ['SLITRK4|p.G265V|1|0.16|ENSG00000179542|chrX:143630315-143630315|C/A|missense_variant'] 29607 25160 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 109.61 3 -1.7669321306565957 0.4418041755545486 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 63178 23593 LLRRRLRQWRW True NCI_RA007_Epitope_Rep5 1637.9855151380898 1637.98387490379 98.067 3 -1.7669612591336112 0.4418041755545486 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 65634 9922 LSAGDGKH True H1975_Epitope_Rep3 783.3875161872302 783.38696496793 43.197 1 -1.7673081536948945 0.4418041755545486 1.0 ['ENST00000589029.1_3_19:38893832-38894179:+|nuORF'] 121756 22176 VFMAPPVH True NCI_RA007_Epitope_Rep5 896.4578446765199 896.45674993586 92.442 2 -1.7673504228736236 0.4418103448275862 1.0 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 33712 14004 GLHRYVWLVYE True NCI_RA007_Epitope_Rep2 1433.74557016949 1433.74446993586 59.131 2 -1.7673840968699697 0.4418165139642577 1.0 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1'] 99658 7306 SIGGIHED True PC9_epitope_Rep4 826.38209645362 826.38098993586 35.432 2 -1.7674053288783347 0.44182268296456756 1.0 ['nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1'] 61470 1688 LKAKKPQKRKP True H1975_Epitope_Rep2 1320.8717737421198 1320.8701349037901 9.0986 3 -1.7675141461404924 0.44183013759186607 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 116072 14048 TSPTVAHP True H1975_Epitope_Rep2 808.4079172786398 808.40682993586 59.188 2 -1.7675272446142756 0.44183013759186607 1.0 ['PYHIN1|p.P477H|1|0.06|ENSG00000163564|chr1:158973717-158973717|C/A|missense_variant'] 67330 22671 LSSEGRVP True PC9_epitope_Rep3 843.4450310633499 843.4444849679301 92.475 1 -1.767532487589313 0.44183013759186607 1.0 ['ENST00000595753.5_1_19:16664089-16664293:-|nuORF'] 14669 10484 DVGGQKSL True PC9_epitope_Rep2 802.4184819623399 802.41738993586 45.647 2 -1.7676139368378998 0.4418314232983743 1.0 ['ENSG00000213465|ENST00000246747|ARL2', 'nc|ENSG00000213465|P36404-2|ARL2', 'ENST00000524585.1_1_11:64781679-64786448:+|nuORF'] 131350 12211 VTGPYEKP True H1975_Epitope_Rep2 889.4545331178899 889.4539849679301 52.053 1 -1.767622853648999 0.4418314232983743 1.0 ['ENSG00000167633|ENST00000391728|KIR3DL1', 'nc|ENSG00000167633|P43629-2|KIR3DL1', 'KIR3DL1|p.S227L|1|0.16|ENSG00000167633|chr19:54821589-54821589|C/T|missense_variant'] 18064 16447 EIGLLATV True PC9_epitope_Rep1 814.48001958974 814.47892993586 68.088 2 -1.7677397001739579 0.44187074529219345 1.0 ['ENSG00000171723|ENST00000478722|GPHN', 'nc|ENSG00000171723|Q9NQX3|GPHN', 'ENST00000555527.1_1_14:67579771-67631908:+|nuORF'] 86454 23434 QKNLEKIRDCA True PC9_epitope_Rep2 1316.6870693172 1316.6854349037899 95.613 3 -1.7679262159462714 0.4418879642829515 1.0 ['nc|ENSG00000151687|Q7Z5J8-3|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-2|ANKAR', 'ENSG00000151687|ENST00000684021|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-4|ANKAR'] 109716 6042 TEDPGTKDRI True NCI_RA007_Epitope_Rep4 1130.5567663402999 1130.5556699358601 29.857 2 -1.7680659541688684 0.44191623383799317 1.0 ['BIRC6|p.Q3442E|1|0.06|ENSG00000115760|chr2:32510612-32510612|C/G|missense_variant'] 104483 23305 SQLRVRDSLR True PC9_epitope_Rep2 1228.7000169594 1228.6983749037902 95.124 3 -1.7682609722069957 0.4419347352833921 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 46495 23393 ISVPLCPLYLR True PC9_epitope_Rep5 1272.72641494804 1272.7247549037902 94.962 3 -1.7682685585559847 0.4419347352833921 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 108111 13645 SYDNYEGSAPN True H1975_Epitope_Rep2 1215.4680109055498 1215.46690993586 57.626 2 -1.7682958479102255 0.4419347352833921 1.0 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 99065 21589 SHGGLDIV True PC9_epitope_Rep3 796.4079172786401 796.40682993586 88.338 2 -1.7683464285341544 0.4419409021592592 1.0 ['nc|ENSG00000124233|P04279-2|SEMG1', 'ENSG00000124233|ENST00000372781|SEMG1'] 82683 22302 PQRIHHMA True NCI_RA007_Epitope_Rep5 988.5025034531601 988.50140993586 92.931 2 -1.7684889519115177 0.44195451833189686 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2'] 113910 21948 TNRPIRREQ True PC9_epitope_Rep6 1168.6425020832799 1168.64140993586 97.338 2 -1.7685298793647564 0.44195451833189686 1.0 ['ENST00000256442.9_1_5:68462858-68462948:+|nuORF'] 137316 23329 YDFNSYWRV True NCI_RA007_Epitope_Rep3 1248.55637241748 1248.55526993586 101.32 2 -1.7685399518146214 0.44195451833189686 1.0 ['ENSG00000010404|ENST00000340855|IDS', 'ENST00000324799.4_1_X:148606549-148607579:+|nuORF', 'nc|ENSG00000241489|P22304-3|IDS', 'nc|ENSG00000241489|P22304-2|IDS'] 59131 23069 LEYRPVKVRG True H1975_Epitope_Rep2 1215.7087907379498 1215.70714490379 95.194 3 -1.7686353487211597 0.44195451833189686 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 123902 21884 VGRRRTSR True PC9_epitope_Rep4 986.5845932843399 986.58404496793 92.387 1 -1.76866258612139 0.4419558011049724 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 93877 23970 RRERELREA True PC9_epitope_Rep4 1213.6639658038498 1213.66286993586 100.67 2 -1.7686757770653159 0.4419558011049724 1.0 ['nc|ENSG00000136279|Q9UJU6-6|DBNL', 'ENSG00000136279|ENST00000448521|DBNL', 'nc|ENSG00000136279|Q9UJU6-2|DBNL', 'nc|ENSG00000136279|Q9UJU6-3|DBNL', 'ENST00000449997.1_1_7:44097442-44098349:+|nuORF', 'nc|ENSG00000136279|Q9UJU6-5|DBNL', 'nc|ENSG00000136279|Q9UJU6-4|DBNL'] 120109 4872 VEAAAASAISV True H1975_Epitope_Rep1 987.5236753068699 987.52256993586 23.818 2 -1.7687204142978958 0.4419619672710799 1.0 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1', 'ENST00000528996.1_1_11:57374185-57382051:+|nuORF', 'nc|ENSG00000149131|P05155-2|SERPING1'] 124220 19084 VGTFAWYL True NCI_RA007_Epitope_Rep1 955.4803539429099 955.47980496793 78.373 1 -1.7689388288960055 0.44196941571643245 1.0 ['nc|ENSG00000139914|A5D6W6-2|FITM1', 'ENSG00000139914|ENST00000267426|FITM1'] 42773 4452 IENELEDPAI True NCI_RA007_Epitope_Rep2 1141.55028397753 1141.54918993586 21.95 2 -1.768978668535489 0.44196941571643245 1.0 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'ENST00000449048.2_1_9:131207010-131207196:+|nuORF'] 38788 21570 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 89.242 2 -1.7690222136371456 0.44196941571643245 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 18642 13096 EKVVDKFIKQR True NCI_RA007_Epitope_Rep1 1388.81398408248 1388.81288993586 54.933 2 -1.7692145242434179 0.44200872879951386 1.0 ['nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4'] 108164 7780 SYFSNAPV True PC9_epitope_Rep3 883.4075829254699 883.40648993586 34.92 2 -1.7692304932814094 0.44201489404017413 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 110322 20879 TETHISLH True NCI_RA007_Epitope_Rep5 936.4664947839201 936.46538993586 87.308 2 -1.7695065654293627 0.442031067017257 1.0 ['PCDHGA4|p.Q472H|1|0.23|ENSG00000262576|chr5:141356523-141356523|A/T|missense_variant'] 92560 24257 RMKRRRRWI True PC9_epitope_Rep2 1356.8149446556797 1356.8138499358602 98.846 2 -1.7695732517063534 0.442031067017257 1.0 ['ENST00000257749.8_2_6:90661229-90661412:-|nuORF'] 37403 8514 GVSWGGIH True PC9_epitope_Rep5 811.39768694811 811.39658993586 37.691 2 -1.7695845794272274 0.442031067017257 1.0 ['ENST00000407472.5_1_22:19839644-19839932:-|nuORF'] 113225 22910 TLQNEWPLL True PC9_epitope_Rep2 1112.5866099165999 1112.58550993586 93.63 2 -1.7696098229778876 0.442031067017257 1.0 ['nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 109366 6527 TCPGTDDL True NCI_RA007_Epitope_Rep2 820.3272839994399 820.3267349679301 30.0 1 -1.7696805216141718 0.442031067017257 1.0 ['ENST00000378536.4_1_1:2239670-2239811:+|nuORF'] 66973 5155 LSPEGSVANKF True NCI_RA007_Epitope_Rep2 1147.5873381925899 1147.58624993586 24.671 2 -1.7697300268245089 0.442031067017257 1.0 ['G3BP1|p.A115S|1|0.19|ENSG00000145907|chr5:151791054-151791054|G/T|missense_variant'] 36165 21680 GVASEHMKRF True PC9_epitope_Rep4 1160.5760623162398 1160.57496993586 91.591 2 -1.7697430969175671 0.442031067017257 1.0 ['LGALS4|p.G70Afs*37|1|0.63|ENSG00000171747|chr19:38808874-38808874|C/-|frameshift_variant', 'ENSG00000171747|ENST00000307751|LGALS4'] 55238 4606 LADGNQELFP True NCI_RA007_Epitope_Rep5 1102.5294889632999 1102.52838993586 24.389 2 -1.7697832527980935 0.442031067017257 1.0 ['ENSG00000118491|ENST00000237275|ZC2HC1B'] 92382 4414 RLPFREVYLHA True PC9_epitope_Rep6 1399.7724536236701 1399.7707949037901 24.116 3 -1.7699729208487915 0.442076538954439 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 64140 10316 LPETGQRDP True PC9_epitope_Rep2 1011.4985231881899 1011.4974299358599 45.009 2 -1.7699776137314518 0.442076538954439 1.0 ['ENST00000515011.5_1_5:58334704-58334812:-|nuORF', 'ENST00000358923.10_1_5:58334704-58335138:-|nuORF'] 124268 11884 VGTLGDAVP True PC9_epitope_Rep1 827.4388830537499 827.43833496793 50.577 1 -1.7700271642530703 0.442082702696731 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17', 'nc|ENSG00000092096|Q8WUG5-3|SLC22A17', 'ENST00000557699.5_1_14:23818379-23821759:-|nuORF'] 40187 15993 HQETQKRL True PC9_epitope_Rep4 1038.5570411238198 1038.55594993586 69.45 2 -1.77012935635204 0.4421122403888643 1.0 ['PMFBP1|p.L507Tfs*33|1|0.12|ENSG00000118557|chr16:72130651-72130652|-/T|frameshift_variant', 'nc|ENSG00000118557|Q8TBY8-3|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-4|PMFBP1', 'ENSG00000118557|ENST00000237353|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-1|PMFBP1'] 76578 10352 NQLGALVHQRT True PC9_epitope_Rep2 1235.67346785839 1235.6723699358602 45.144 2 -1.7701808753364447 0.4421122403888643 1.0 ['ENSG00000107164|ENST00000319725|FUBP3', 'FUBP3|p.G252Efs*5|1|0.26|ENSG00000107164|chr9:130620440-130620440|G/-|frameshift_variant', 'nc|ENSG00000107164|Q96I24-2|FUBP3'] 125553 23387 VKKFLTPG True PC9_epitope_Rep6 888.5432885526399 888.54274496793 103.06 1 -1.770306263094618 0.4421122403888643 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 56979 6899 LDREAIDP True NCI_RA007_Epitope_Rep3 927.4661604307498 927.46506993586 34.242 2 -1.7704262128160604 0.44211840346438946 1.0 ['ENSG00000074276|ENST00000261944|CDHR2'] 130736 6168 VSVYAPPVGG True NCI_RA007_Epitope_Rep3 944.4967322830398 944.49562993586 31.264 2 -1.770469279251579 0.44212456640374714 1.0 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 126437 19901 VLKQFLLQR True NCI_RA007_Epitope_Rep5 1143.7128134892298 1143.7111649037902 83.462 3 -1.7705432185517744 0.4421307292069419 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 60138 15420 LGMWLHEV True PC9_epitope_Rep4 983.48987308079 983.48876993586 67.244 2 -1.770597164206452 0.44213200773267053 1.0 ['ENST00000582783.5_1_19:40826279-40826525:-|nuORF'] 92099 24501 RKYPKLKEVD True PC9_epitope_Rep5 1274.73467113262 1274.73356993586 99.325 2 -1.7706408157589688 0.44213200773267053 1.0 ['ENSG00000161980|ENST00000293860|POLR3K'] 125803 25594 VKVPQLAL True PC9_epitope_Rep2 866.5589386167799 866.5583949679301 104.13 1 -1.7707587667580573 0.4421492167995935 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 34643 9199 GQALGDVP True NCI_RA007_Epitope_Rep5 755.38136817763 755.3808149679301 42.035 1 -1.7708667790940062 0.442160717441244 1.0 ['ENST00000243776.10_1_2:220403873-220403954:-|nuORF'] 121931 23882 VFSFPDSTKK True H1975_Epitope_Rep2 1154.5971746003 1154.5960699358602 98.372 2 -1.7709909679232576 0.442160717441244 1.0 ['ENST00000309137.12_1_16:57187828-57187963:-|nuORF'] 34224 21632 GNLLRQPVSA True PC9_epitope_Rep6 1053.59309227937 1053.59198993586 96.093 2 -1.771003323741834 0.442160717441244 1.0 ['nc|ENSG00000149499|Q32P44-3|EML3'] 33100 13564 GIPVEPESEF True PC9_epitope_Rep1 1102.51825557326 1102.51714993586 57.03 2 -1.7710389364124235 0.442160717441244 1.0 ['CDH6|p.R137I|1|0.2|ENSG00000113361|chr5:31294143-31294143|G/T|missense_variant'] 38797 16248 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 69.252 2 -1.771151936979638 0.442160717441244 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 49815 22263 KHNPLQCN True PC9_epitope_Rep1 952.4548845544001 952.45378993586 90.451 2 -1.7712749893905035 0.442160717441244 1.0 ['ENST00000374092.8_1_20:34256969-34257164:-|nuORF'] 101668 11901 SLLVLWTSP True PC9_epitope_Rep5 1014.57498260374 1014.57388993586 50.774 2 -1.771343227006531 0.442160717441244 1.0 ['ENSG00000172724|ENST00000311925|CCL19'] 112903 7439 TLKYANRAK True NCI_RA007_Epitope_Rep4 1063.61382772395 1063.6127299358602 35.258 2 -1.7714172466433875 0.442160717441244 1.0 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF', 'ENST00000531047.1_1_11:28106151-28106310:-|nuORF'] 39287 24614 HINRSLLALGN True H1975_Epitope_Rep2 1206.6833042660999 1206.68220993586 101.23 2 -1.7714712612772587 0.442160717441244 1.0 ['KIF19|p.P803Rfs*40|1|0.72|ENSG00000196169|chr17:74354260-74354261|CC/-|frameshift_variant', 'KIF19|p.G979Wfs*20|1|0.24|ENSG00000196169|chr17:74355247-74355248|-/G|frameshift_variant', 'ENSG00000196169|ENST00000389916|KIF19', 'nc|ENSG00000196169|Q2TAC6-3|KIF19', 'ENST00000359939.10_1_17:72322488-72347101:+|nuORF', 'nc|ENSG00000196169|Q2TAC6-2|KIF19', 'ENST00000547389.1_1_17:72322488-72347101:+|nuORF'] 82538 23798 PPSAGFRCC True H1975_Epitope_Rep1 936.39459279696 936.39348993586 98.785 2 -1.7715100201799503 0.442160717441244 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 38799 16978 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 72.065 2 -1.7715387502945867 0.442160717441244 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 123056 11696 VGKARAIF True H1975_Epitope_Rep3 860.5232218143999 860.52212993586 50.128 2 -1.7715481345813056 0.442160717441244 1.0 ['ENST00000444527.2_1_8:56367431-56367641:-|nuORF'] 27044 23138 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 96.253 2 -1.7715859822607642 0.442160717441244 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 113978 23952 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 99.506 2 -1.7717467548296117 0.442160717441244 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 57642 19057 LEEEKSRLL True PC9_epitope_Rep1 1115.6186383208699 1115.61754993586 78.094 2 -1.7717783760095045 0.442160717441244 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 72347 9300 MIRGCGGG True NCI_RA007_Epitope_Rep5 749.3312642644099 749.33016993586 42.417 2 -1.7717924445180877 0.442160717441244 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 41806 12282 IASVDAFQGR True PC9_epitope_Rep3 1062.5458077337798 1062.54470993586 52.27 2 -1.771809890756962 0.442160717441244 1.0 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 45586 6599 IQTFTVFF True NCI_RA007_Epitope_Rep2 1001.5222187548899 1001.52112993586 30.277 2 -1.771860931086163 0.442160717441244 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant', 'DCC|p.G511Efs*21|1|0.27|ENSG00000187323|chr18:53179073-53179073|G/-|frameshift_variant'] 49933 17588 KILGKVYLSYV True NCI_RA007_Epitope_Rep5 1281.7696596590101 1281.7680149037901 74.434 3 -1.7719280717003412 0.4421619950080622 1.0 ['ENST00000298281.8_1_11:82872486-82874784:+|nuORF'] 88284 8130 QSELLLRE True H1975_Epitope_Rep3 986.53965972418 986.53856993586 36.248 2 -1.7720222358545263 0.4421619950080622 1.0 ['ENST00000321867.5_1_12:132405934-132406579:+|nuORF'] 91601 15524 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 64.868 3 -1.7720741257543804 0.44216943312460655 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 3842 6020 AGVQQQPL True NCI_RA007_Epitope_Rep3 839.4501164437899 839.44900993586 30.659 2 -1.7720928195778478 0.44216943312460655 1.0 ['MUS81|p.V311Wfs*46|1|0.18|ENSG00000172732|chr11:65863689-65863689|G/-|frameshift_variant', 'ENSG00000172732|ENST00000308110|MUS81', 'ENST00000530928.5_1_11:65630557-65632047:+|nuORF'] 66512 20263 LSHLKRTV True PC9_epitope_Rep5 952.5817993196799 952.58070993586 82.992 2 -1.7721881382379938 0.44216943312460655 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000555062.1_1_14:102514125-102516009:+|nuORF'] 109202 19843 TAQNDTLLLEK True H1975_Epitope_Rep2 1244.66123140884 1244.65957490379 82.31 3 -1.7724293588995264 0.44218303093216127 1.0 ['nc|ENSG00000186409|Q5VVM6-2|CCDC30', 'nc|ENSG00000186409|Q5VVM6|CCDC30', 'ENSG00000186409|ENST00000657597|CCDC30'] 10487 10817 CIRPSVHCTSS True NCI_RA007_Epitope_Rep5 1188.5379625553599 1188.53632490379 48.242 3 -1.7724499801015114 0.44218303093216127 1.0 ['ENST00000478688.1_1_3:49849301-49849385:-|nuORF'] 139768 25817 YPEYLSNFP True PC9_epitope_Rep2 1128.51277627 1128.51112490379 105.04 3 -1.7724733700935111 0.44218303093216127 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 109113 5302 TALLVIIIII True PC9_epitope_Rep1 1080.75221868972 1080.75112993586 25.235 2 -1.7725057341207326 0.44218303093216127 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 61175 25458 LILCIKFLF True PC9_epitope_Rep2 1108.67186019404 1108.67127496793 103.61 1 -1.7725812176215905 0.44218430787918944 1.0 ['ENST00000443035.7_1_15:66025097-66030063:-|nuORF'] 56694 20143 LDKQRFRGMLW True NCI_RA007_Epitope_Rep5 1448.7710737246798 1448.7694349037902 84.427 3 -1.772583490400001 0.44218430787918944 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 35331 18736 GRRLVPGHSRR True NCI_RA007_Epitope_Rep3 1289.75411822093 1289.75302993586 81.928 2 -1.7726886363594863 0.44221255355801936 1.0 ['ENST00000523366.1_1_5:172353721-172353871:+|nuORF'] 154 11175 AADNQIYI True H1975_Epitope_Rep2 906.4446967101799 906.44358993586 48.023 2 -1.7728471094446663 0.4422163821470374 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 13194 23093 DLSEAHFA True H1975_Epitope_Rep1 888.39774651776 888.39664993586 96.026 2 -1.7730108616999831 0.4422163821470374 1.0 ['ENSG00000099769|ENST00000215539|IGFALS', 'nc|ENSG00000099769|P35858-2|IGFALS'] 135773 12483 WMNILWAWF True PC9_epitope_Rep4 1265.6055715393697 1265.6039249037901 55.822 3 -1.7730206927473184 0.4422163821470374 1.0 ['ENSG00000213088|ENST00000368122|ACKR1', 'nc|ENSG00000213088|Q16570-2|ACKR1'] 72790 26422 MPEWLTLQ True PC9_epitope_Rep1 1016.50010341132 1016.49900993586 107.19 2 -1.7730480359057346 0.4422163821470374 1.0 ['ENST00000511895.1_1_4:80132856-80148416:+|nuORF'] 86981 5014 QLYHLIQNW True NCI_RA007_Epitope_Rep2 1213.62439240765 1213.6232899358602 24.126 2 -1.7730845094446972 0.4422163821470374 1.0 ['ENSG00000008438|ENST00000008938|PGLYRP1'] 94377 21900 RRRRAVPA True PC9_epitope_Rep4 980.6104141093598 980.60930993586 92.449 2 -1.773222711452233 0.4422163821470374 1.0 ['ENSG00000115275|ENST00000448666|MOGS'] 22727 5151 ETSPRPGAP True H1975_Epitope_Rep3 910.4508447197799 910.44974993586 24.917 2 -1.77328940670348 0.44222254121440324 1.0 ['ENST00000368936.5_1_1:150981012-150997089:+|nuORF', 'ENST00000368935.1_1_1:150981012-150999711:+|nuORF', 'ENST00000431193.5_3_1:150981012-150998071:+|nuORF', 'ENST00000462440.5_1_1:150981012-150999718:+|nuORF', 'ENST00000475722.5_1_1:150981012-150999718:+|nuORF'] 26815 16620 FLAHLQRAS True PC9_epitope_Rep6 1041.5719629119699 1041.5708699358602 76.392 2 -1.7734697033500066 0.442241017600424 1.0 ['ENST00000508662.5_1_5:149618053-149669203:-|nuORF'] 52952 20970 KPGPLRRAH True PC9_epitope_Rep6 1030.6148307834599 1030.6137299358602 93.454 2 -1.7734903393957282 0.442241017600424 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 3396 19271 AGHYKRFLL True PC9_epitope_Rep4 1103.62399848483 1103.6229099358602 82.23 2 -1.773564978838134 0.442241017600424 1.0 ['ENST00000458001.2_1_13:114545255-114545336:+|nuORF'] 82224 7773 PPAPVDPP True H1975_Epitope_Rep2 788.4068546494799 788.40574993586 34.846 2 -1.7736937966812054 0.4422422930836499 1.0 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 133041 21459 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 88.787 2 -1.7737610549326739 0.4422422930836499 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 32270 22827 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 94.249 2 -1.7739228039841053 0.4422656508777741 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 40033 9609 HPTARLLL True PC9_epitope_Rep4 919.56033559911 919.55922993586 44.585 2 -1.7739797356959783 0.4422656508777741 1.0 ['nc|ENSG00000137343|Q5SQI0-7|ATAT1', 'nc|ENSG00000137343|Q5SQI0-6|ATAT1', 'nc|ENSG00000137343|Q5SQI0-5|ATAT1', 'nc|ENSG00000137343|Q5SQI0-4|ATAT1', 'nc|ENSG00000137343|Q5SQI0-3|ATAT1', 'ENSG00000137343|ENST00000330083|ATAT1', 'nc|ENSG00000137343|Q5SQI0|ATAT1'] 92090 18898 RKWQQMRPIP True NCI_RA007_Epitope_Rep3 1338.7342942931398 1338.73318993586 82.624 2 -1.7740955110622925 0.4422718088571397 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2'] 39776 17780 HLWVKLRNML True NCI_RA007_Epitope_Rep4 1308.7488817281198 1308.74722490379 76.975 3 -1.7742226760623796 0.44227796670052555 1.0 ['ENST00000475582.5_1_2:27590224-27590551:-|nuORF'] 60239 9011 LGQPLPAAR True PC9_epitope_Rep1 921.5396001545299 921.53850993586 39.509 2 -1.774597757257513 0.4423614101332627 1.0 ['ENST00000558265.5_2_14:103800768-103802173:+|nuORF', 'ENST00000560763.5_2_14:103800597-103802258:+|nuORF'] 97142 4466 SDPVIFQT True PC9_epitope_Rep3 905.44944773745 905.44834993586 22.274 2 -1.7746858120903026 0.4423786075474198 1.0 ['IL21R|p.G372Afs*8|1|0.12|ENSG00000103522|chr16:27448780-27448780|G/-|frameshift_variant', 'ENSG00000103522|ENST00000337929|IL21R', 'ENST00000564583.1_1_16:27455877-27457360:+|nuORF'] 141099 15458 YSQETYSSTPK True PC9_epitope_Rep5 1289.57756135453 1289.5764699358601 64.47 2 -1.7748118817534655 0.44240938848960576 1.0 ['nc|ENSG00000188916|Q6ZSG2-2|INSYN2A', 'ENSG00000188916|ENST00000522781|INSYN2A'] 106611 24453 STQKKVIKKKT True H1975_Epitope_Rep2 1287.8238204901895 1287.82216490379 100.6 3 -1.7748342216513313 0.44240938848960576 1.0 ['ENSG00000186472|ENST00000333891|PCLO'] 62916 22377 LLPCLHSA True PC9_epitope_Rep6 852.45275929608 852.45166993586 99.043 2 -1.7748556299554612 0.44240938848960576 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 64107 19147 LPDRHPAVCP True PC9_epitope_Rep1 1103.5545985956699 1103.5535099358601 78.441 2 -1.7748807250514822 0.44240938848960576 1.0 ['ENST00000508859.6_1_5:751252-755178:-|nuORF'] 112719 6944 TLGRWAPL True NCI_RA007_Epitope_Rep2 912.5181364339599 912.51702993586 31.63 2 -1.7749411523953762 0.44240938848960576 1.0 ['ENST00000525499.1_1_11:111234081-111234617:-|nuORF'] 119256 24938 VALKPLGGL True NCI_RA007_Epitope_Rep1 866.5589386167799 866.5583949679301 103.21 1 -1.7750051349266012 0.44243401079672784 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 61598 17268 LKKYHAIA True NCI_RA007_Epitope_Rep3 942.56508662638 942.56398993586 75.812 2 -1.7750355884393179 0.44243401079672784 1.0 ['ERLIN1|p.Q289H|1|0.56|ENSG00000107566|chr10:100152311-100152311|C/A|missense_variant'] 72350 12500 MIRGCGGG True PC9_epitope_Rep4 749.3312642644099 749.33016993586 55.893 2 -1.7750596348093428 0.44243401079672784 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 102958 10185 SPERRKPP True H1975_Epitope_Rep3 965.5406627836899 965.53956993586 44.221 2 -1.7751013731695926 0.44243401079672784 1.0 ['ENSG00000244486|ENST00000622235|SCARF2', 'nc|ENSG00000244486|Q96GP6|SCARF2'] 48618 28625 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 119.98 3 -1.7752263291280428 0.442451205510907 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 72391 24468 MKILLIIFV True NCI_RA007_Epitope_Rep3 1088.70316032232 1088.7020699358602 105.88 2 -1.775367371950742 0.44249047855605234 1.0 ['nc|ENSG00000172752|A8TX70|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70-2|COL6A5'] 110801 21911 TGLDELFV True PC9_epitope_Rep3 892.4541987647199 892.45310993586 89.581 2 -1.7754688965243868 0.44250767226723775 1.0 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'nc|ENSG00000198522|Q9HCN4-2|GPN1', 'nc|ENSG00000198522|Q9HCN4-3|GPN1'] 99736 8115 SIIESAVL True NCI_RA007_Epitope_Rep3 830.4749342092999 830.47382993586 39.025 2 -1.775742647933644 0.4425138264872443 1.0 ['OR52K1|p.M112I|1|0.38|ENSG00000196778|chr11:4489236-4489236|G/T|missense_variant'] 20294 12146 ENSPTINEPK True NCI_RA007_Epitope_Rep2 1127.54586730343 1127.54527496793 51.839 1 -1.7757845851454503 0.4425199805713781 1.0 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 49558 14407 KFLPLFGH True NCI_RA007_Epitope_Rep3 957.54362290581 957.54252993586 63.984 2 -1.7760830399960421 0.4425261345196437 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 46873 25038 ITLDHLTTLH True PC9_epitope_Rep6 1162.63462273818 1162.63352993586 111.31 2 -1.776256626638474 0.4425543658240424 1.0 ['ANK1|p.P341T|1|0.13|ENSG00000029534|chr8:41719747-41719747|G/T|missense_variant'] 30865 9173 GAPPGEAP True H1975_Epitope_Rep1 694.32860432878 694.32805496793 40.189 1 -1.7763799652642254 0.4425556340515719 1.0 ['nc|ENSG00000288658|A0A7I2V3R4|RNF228'] 12116 6869 DICEEIKVV True PC9_epitope_Rep1 1046.53179746242 1046.5307099358602 31.226 2 -1.7764166197188187 0.4425556340515719 1.0 ['ENSG00000205359|ENST00000506729|SLCO6A1'] 59507 16302 LFRMLIRLL True PC9_epitope_Rep6 1173.74200544253 1173.7403549037901 75.068 3 -1.7765784343720168 0.4425569022231053 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 126894 14837 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 62.335 2 -1.7766010927256781 0.4425569022231053 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 57894 11040 LEFVMAEW True H1975_Epitope_Rep2 1023.4735543103099 1023.47244993586 47.495 2 -1.7767392131671065 0.4425740934930184 1.0 ['ENSG00000198700|ENST00000361565|IPO9'] 90309 18531 REETKKKI True H1975_Epitope_Rep2 1030.6134933707797 1030.6123899358602 76.902 2 -1.777018556753339 0.44260974182938 1.0 ['nc|ENSG00000167257|Q8ND24-2|RNF214', 'ENSG00000167257|ENST00000300650|RNF214'] 73960 320 NCLVEKWRDQ True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 1.756 3 -1.7770652542712697 0.44260974182938 1.0 ['ENSG00000106483|ENST00000436072|SFRP4'] 27224 12017 FLNWFDERAWY True NCI_RA007_Epitope_Rep5 1545.70409928033 1545.70300993586 52.883 2 -1.7771227192704993 0.44260974182938 1.0 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 76354 5704 NPWRWDQA True PC9_epitope_Rep5 1071.48862721083 1071.48752993586 26.935 2 -1.777212323248182 0.44260974182938 1.0 ['LTR12C_dup1159|chr6:63441884-63443495:-|1.4512251268435548|0.0180559155246374|6.33|493.0|76|2|anti-sense'] 77731 6085 NTNFYLDSV True PC9_epitope_Rep2 1071.48728979815 1071.48618993586 28.798 2 -1.7774283516440736 0.44264900662251655 1.0 ['nc|ENSG00000136696|Q9NZH7-2|IL36B'] 15997 7306 EDRSSLLLLS True H1975_Epitope_Rep3 1131.61355294043 1131.61244993586 33.075 2 -1.7774654000973213 0.44265027262091344 1.0 ['ENSG00000176624|ENST00000406189|MEX3C'] 91199 26468 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 110.48 1 -1.777489095835577 0.44265027262091344 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 75504 5926 NKNKKEYIYFL True NCI_RA007_Epitope_Rep5 1458.7871006282996 1458.78544490379 29.481 3 -1.77750386027236 0.4426515385634188 1.0 ['ENST00000503468.5_1_15:56126312-56207567:-|nuORF'] 102562 21366 SLVVAFICKLH True PC9_epitope_Rep6 1228.7002002002 1228.6991099358602 95.059 2 -1.7775513176972568 0.4426515385634188 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2'] 37649 18862 GVWNYIRPK True NCI_RA007_Epitope_Rep4 1131.61891310439 1131.6172649037899 81.576 3 -1.7776507864014455 0.4426567793337085 1.0 ['SLC6A15|p.S137R|1|0.23|ENSG00000072041|chr12:84885947-84885947|G/T|missense_variant'] 91197 26313 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 109.71 1 -1.77787368679464 0.4426567793337085 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 32704 24552 GGTHPEDH True H1975_Epitope_Rep1 848.3412942708001 848.3401899358599 101.74 2 -1.7779855056290987 0.4426567793337085 1.0 ['ENSG00000008853|ENST00000251822|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2'] 44126 19630 IIQQRRQIIG True NCI_RA007_Epitope_Rep1 1223.74623887583 1223.7445949037901 80.547 3 -1.7780123403601384 0.4426567793337085 1.0 ['nc|ENSG00000101871|O15344-2|MID1', 'ENSG00000101871|ENST00000317552|MID1'] 11508 23015 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 94.978 3 -1.7780313682934041 0.4426567793337085 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 108163 6962 SYFSNAPV True PC9_epitope_Rep2 883.4075829254699 883.40648993586 32.176 2 -1.7780977042463404 0.4426567793337085 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 81696 24351 PLLYQLNL True NCI_RA007_Epitope_Rep2 972.56441792004 972.56332993586 102.27 2 -1.7781780385317667 0.4426567793337085 1.0 ['Tigger1_dup8984|chr12:21768325-21770471:+|1.9031382895990767|0.4575146523094087|2.06|537.0|125|3|anti-sense'] 81479 17034 PLGGSRIR True NCI_RA007_Epitope_Rep2 854.50863437942 854.50808496793 70.995 1 -1.778182577105038 0.4426567793337085 1.0 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF'] 36102 22715 GVAGHRKA True PC9_epitope_Rep2 794.4511195032999 794.45057496793 92.869 1 -1.7781844295916418 0.4426567793337085 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 30606 19105 GAKALPTAPPP True PC9_epitope_Rep1 1018.5811306133398 1018.58002993586 78.276 2 -1.7782159383989944 0.4426567793337085 1.0 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 95335 16212 RVRSWARVISH True NCI_RA007_Epitope_Rep2 1365.77418495917 1365.77308993586 67.79 2 -1.7783569025246049 0.4426567793337085 1.0 ['ENST00000602622.5_1_16:67692761-67693112:-|nuORF'] 29714 5889 FVMENSQNAPL True PC9_epitope_Rep2 1248.58087291316 1248.5797699358602 28.044 2 -1.778390309109227 0.4426567793337085 1.0 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 34102 8699 GMDLQRPDSYQ True NCI_RA007_Epitope_Rep2 1308.57685016188 1308.5757499358601 38.486 2 -1.7784014388174754 0.4426567793337085 1.0 ['ENST00000392617.7_1_17:72667365-72740608:+|nuORF'] 30089 25206 FYKKKYRVGNS True PC9_epitope_Rep1 1388.7564692063597 1388.75536993586 101.84 2 -1.7784451487133124 0.4426567793337085 1.0 ['ENST00000256497.8_1_3:5261359-5261473:+|nuORF'] 61592 15096 LKKNQMEN True PC9_epitope_Rep2 1003.5120650773499 1003.5114749679301 63.325 1 -1.7784472355780017 0.4426567793337085 1.0 ['nc|ENSG00000204410|O43196-4|MSH5', 'ENSG00000204410|ENST00000375750|MSH5', 'nc|ENSG00000204410|O43196-2|MSH5', 'nc|ENSG00000204410|O43196-3|MSH5'] 119259 24007 VALKPLGGL True NCI_RA007_Epitope_Rep3 866.5589386167799 866.5583949679301 103.99 1 -1.7784841805638893 0.4426567793337085 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 69774 26425 LVFRKPRGLFI True PC9_epitope_Rep5 1344.8394109846797 1344.83776490379 107.55 3 -1.7785019671439526 0.4426567793337085 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 130699 20659 VSVALSTSHN True PC9_epitope_Rep4 1013.5141732523301 1013.51306993586 87.622 2 -1.7785393917371792 0.44266292953146036 1.0 ['ENSG00000110851|ENST00000228437|PRDM4', 'PRDM4|p.S298C|1|0.27|ENSG00000110851|chr12:107751648-107751648|G/C|missense_variant'] 11635 7309 DGLASVCPL True H1975_Epitope_Rep3 873.42660411789 873.42550993586 33.087 2 -1.778650548996845 0.4426641949152542 1.0 ['ENSG00000100647|ENST00000342745|SUSD6', 'ENST00000556993.1_1_14:70125309-70170323:+|nuORF'] 74712 23483 NGTVSCPHC True H1975_Epitope_Rep1 916.3531219078 916.35202993586 97.579 2 -1.778676397903569 0.4426641949152542 1.0 ['nc|ENSG00000106948|Q7Z591-4|AKNA', 'nc|ENSG00000106948|Q7Z591-5|AKNA', 'nc|ENSG00000106948|Q7Z591-8|AKNA', 'nc|ENSG00000106948|Q7Z591-7|AKNA', 'nc|ENSG00000106948|Q7Z591-2|AKNA', 'ENSG00000106948|ENST00000374088|AKNA'] 20293 12373 ENSPTINEPK True NCI_RA007_Epitope_Rep1 1127.54586730343 1127.54527496793 52.102 1 -1.7787677026818896 0.4426654602431973 1.0 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 72153 11851 MFVLEQEEYQR True H1975_Epitope_Rep1 1470.68131523042 1470.6802099358601 50.583 2 -1.7788190074836865 0.4426654602431973 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 119262 24869 VALKPLGGL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.5583949679301 103.15 1 -1.7788779121211955 0.44267161000584815 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 42820 20475 IEPYLKKKD True PC9_epitope_Rep4 1132.6492101731599 1132.64810993586 86.904 2 -1.7792010274968943 0.4427439643377323 1.0 ['ENST00000475506.1_1_1:17354162-17371284:-|nuORF', 'ENSG00000117118|ENST00000375499|SDHB'] 82967 11696 PSEWGSEDLS True H1975_Epitope_Rep2 1105.45638359269 1105.45528993586 50.063 2 -1.7792658103268024 0.44274522784949794 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 109227 6340 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 29.361 2 -1.7792982380620657 0.44274522784949794 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 119474 20240 VARLDGRL True PC9_epitope_Rep6 898.5348491272599 898.53374993586 90.537 2 -1.779357471492174 0.4427624102128411 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 142387 8098 YYELWWFWLLW True H1975_Epitope_Rep1 1703.8176724805896 1703.81602490379 36.094 3 -1.7794691679534036 0.4427685585665107 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 69782 6723 LVFSLMYAI True PC9_epitope_Rep2 1055.57254007559 1055.57144993586 31.271 2 -1.7795145407836925 0.4427698214797979 1.0 ['OR1Q1|p.Y266Ifs*49|1|0.13|ENSG00000165202|chr9:122615532-122615533|-/A|frameshift_variant', 'ENSG00000165202|ENST00000297913|OR1Q1'] 60475 16832 LGYIVSSR True PC9_epitope_Rep1 893.4970666362101 893.49596993586 69.569 2 -1.779565498546534 0.4427698214797979 1.0 ['ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 27526 21842 FMYVTLLL True NCI_RA007_Epitope_Rep2 998.5510763550199 998.54996993586 90.554 2 -1.779695954530607 0.4427980360787775 1.0 ['ENST00000405334.5_1_2:37334471-37336383:-|nuORF'] 124112 10591 VGSPPGPG True NCI_RA007_Epitope_Rep5 666.33368970922 666.33314496793 47.374 1 -1.7798741706456032 0.4428164787396015 1.0 ['ENSG00000083290|ENST00000395544|ULK2'] 102523 10890 SLVQHERIH True NCI_RA007_Epitope_Rep1 1117.59924028897 1117.5981499358602 46.351 2 -1.7799032244571882 0.4428164787396015 1.0 ['ENSG00000278129|ENST00000621650|ZNF8', 'ENSG00000167637|ENST00000618787|ZNF283'] 138663 23601 YIIEKIAK True PC9_epitope_Rep6 976.5957180483199 976.59462993586 103.93 2 -1.7800322455265598 0.4428164787396015 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 105782 21869 SSHRGGGG True PC9_epitope_Rep5 713.3204992565699 713.31995496793 89.156 1 -1.7800979939353363 0.4428336588002957 1.0 ['PDE10A|p.W446Cfs*60|1|0.33|ENSG00000112541|chr6:165396370-165396370|C/-|frameshift_variant', 'PDE10A|p.H485Ifs*21|1|0.2|ENSG00000112541|chr6:165395204-165395204|A/-|frameshift_variant', 'ENSG00000112541|ENST00000539869|PDE10A'] 36945 13964 GVLVEAPAK True H1975_Epitope_Rep1 882.5174677276199 882.51691496793 58.87 1 -1.7802073614424556 0.44283980582524274 1.0 ['GSDMB|p.R330P|1|0.4|ENSG00000073605|chr17:39905885-39905885|C/G|missense_variant'] 112167 23004 TKDIVLRASS True PC9_epitope_Rep5 1088.61897267404 1088.6178699358602 93.475 2 -1.780469582907997 0.44284595271455524 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 59291 19945 LFGQIRRR True H1975_Epitope_Rep3 1044.6304808476 1044.6293899358602 83.475 2 -1.780551083049945 0.4428473723690597 1.0 ['ENST00000368439.5_1_1:154947175-154947271:+|nuORF'] 131990 9564 VTSLPHMC True NCI_RA007_Epitope_Rep2 886.4040948515001 886.4035449679301 41.816 1 -1.7805877878150955 0.4428473723690597 1.0 ['nc|ENSG00000185973|Q9NVH6-3|TMLHE'] 31060 8216 GATLLRDV True NCI_RA007_Epitope_Rep3 843.48141657207 843.48030993586 39.451 2 -1.7806240124285961 0.4428473723690597 1.0 ['ENSG00000177542|ENST00000628067|SLC25A22'] 75923 24016 NLRYIVKWRRR True PC9_epitope_Rep1 1558.9320825828997 1558.93098993586 97.186 2 -1.780700642438947 0.4428473723690597 1.0 ['nc|ENSG00000163531|O94856|NFASC', 'nc|ENSG00000163531|O94856-8|NFASC', 'nc|ENSG00000163531|O94856-5|NFASC', 'nc|ENSG00000163531|O94856-13|NFASC', 'nc|ENSG00000163531|O94856-7|NFASC', 'ENSG00000163531|ENST00000339876|NFASC', 'nc|ENSG00000163531|O94856-6|NFASC', 'nc|ENSG00000163531|O94856-11|NFASC', 'nc|ENSG00000163531|O94856-3|NFASC', 'nc|ENSG00000163531|O94856-10|NFASC', 'NFASC|p.G1109Efs*44|1|0.14|ENSG00000163531|chr1:205009592-205009593|-/A|frameshift_variant', 'nc|ENSG00000163531|O94856-12|NFASC', 'nc|ENSG00000163531|O94856-4|NFASC', 'ENST00000512826.5_1_1:204926851-204957975:+|nuORF', 'ENST00000404977.6_1_1:204937408-204955114:+|nuORF'] 17925 22789 EIAKNGVS True PC9_epitope_Rep1 816.4341320264799 816.4335849679301 92.469 1 -1.7808964071987174 0.4428473723690597 1.0 ['ENST00000419785.1_1_1:2303243-2316539:-|nuORF'] 34617 22712 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 93.801 2 -1.7809641063616608 0.4428473723690597 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 62961 7940 LLPGPLPTPSF True H1975_Epitope_Rep1 1137.64339651673 1137.6422899358602 35.49 2 -1.781061296713804 0.4428473723690597 1.0 ['ENST00000264554.10_1_19:416804-417233:-|nuORF'] 119257 24689 VALKPLGGL True NCI_RA007_Epitope_Rep2 866.5589386167799 866.5583949679301 103.79 1 -1.7811956222522747 0.4428473723690597 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 29578 25930 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 106.49 3 -1.7812357134105008 0.4428473723690597 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 38796 15720 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 67.184 2 -1.7813254414113202 0.4428473723690597 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 106092 14119 STCVLEFEM True PC9_epitope_Rep1 1057.4460192331298 1057.44492993586 59.136 2 -1.7813312110913058 0.4428473723690597 1.0 ['PCDHGB3|p.A257Lfs*6|1|0.19|ENSG00000262209|chr5:141371160-141371160|C/-|frameshift_variant', 'PCDHGB3|p.I394Sfs*12|1|0.22|ENSG00000262209|chr5:141371571-141371571|A/-|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 30825 10319 GAPEEVGG True NCI_RA007_Epitope_Rep5 714.3184335678999 714.31788496793 46.323 1 -1.7814367585526103 0.44284863326494145 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 79706 4994 PDTGLLRNLGP True NCI_RA007_Epitope_Rep5 1151.62987171091 1151.6287699358602 25.913 2 -1.781443201942447 0.44284863326494145 1.0 ['ENSG00000074276|ENST00000261944|CDHR2'] 89698 8204 RAAGGGGK True H1975_Epitope_Rep3 672.366721173 672.3661749679301 36.539 1 -1.7816288070561244 0.4429099332634714 1.0 ['ENST00000267079.6_1_12:53881161-53893393:-|nuORF'] 27118 19848 FLILFSIHLIY True NCI_RA007_Epitope_Rep4 1377.80604516773 1377.80440490379 85.786 3 -1.7816571751206525 0.442911192737461 1.0 ['nc|ENSG00000154263|Q8WWZ4-2|ABCA10', 'ENSG00000154263|ENST00000690296|ABCA10', 'ENST00000522406.5_1_17:67144970-67178294:-|nuORF'] 137365 25464 YDRKKVSKAA True PC9_epitope_Rep2 1164.6615061923599 1164.6609749679299 103.63 1 -1.7816863965464167 0.442911192737461 1.0 ['ENSG00000099194|ENST00000370355|SCD'] 84512 22553 QAPLQRRI True PC9_epitope_Rep3 980.5879473292799 980.58684993586 92.019 2 -1.7817648401733495 0.4429124521558808 1.0 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'ENST00000436129.2_1_20:60551226-60583162:-|nuORF'] 33910 15864 GLQMASRYTV True PC9_epitope_Rep5 1124.5648289261999 1124.56372993586 66.013 2 -1.7817799107946344 0.4429124521558808 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 32657 12226 GGPHPNPA True PC9_epitope_Rep3 745.3507367556899 745.3501849679301 52.057 1 -1.7821419798956402 0.4429406574012795 1.0 ['ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 82707 12136 PQVSSPVQEK True PC9_epitope_Rep6 1097.57168812845 1097.5705899358602 58.031 2 -1.7823887839866264 0.4429798921256108 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 112880 14507 TLKKYRSI True PC9_epitope_Rep2 1007.6127650947899 1007.61166993586 61.073 2 -1.7824732049097884 0.442986036045973 1.0 ['nc|ENSG00000183621|Q7Z4V0-3|ZNF438', 'nc|ENSG00000183621|Q7Z4V0-2|ZNF438', 'ENSG00000183621|ENST00000436087|ZNF438'] 49820 19093 KHRGSLEIA True NCI_RA007_Epitope_Rep4 1009.5668775315298 1009.56578993586 82.59 2 -1.7825812292513654 0.44299217983080197 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1', 'ENST00000549154.1_1_12:53682884-53683443:+|nuORF'] 110280 7851 TESAWERGLRH True PC9_epitope_Rep5 1340.65854607024 1340.65690490379 35.141 3 -1.7828840498956218 0.4430044669938786 1.0 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ZC3H18|p.Q799Afs*25|1|0.15|ENSG00000158545|chr16:88628042-88628043|-/A|frameshift_variant'] 42573 22783 IEFLPFKVV True PC9_epitope_Rep2 1090.64266824074 1090.6415699358602 93.124 2 -1.7830531330641852 0.4430044669938786 1.0 ['ENST00000442006.2_1_1:39174637-39175513:+|nuORF'] 4948 16147 ALGFLDPAR True PC9_epitope_Rep1 958.5236157372199 958.52250993586 66.923 2 -1.7830989928719227 0.443021639864999 1.0 ['ENST00000600689.1_1_19:18974163-18976510:+|nuORF'] 943 8944 ADRDRLQLIKE True H1975_Epitope_Rep3 1355.7521121019101 1355.75047490379 39.4 3 -1.7832012162813793 0.44302289672210704 1.0 ['ENSG00000047644|ENST00000380861|WWC3', 'WWC3|p.T343Pfs*3|1|0.33|ENSG00000047644|chrX:10116470-10116470|A/-|frameshift_variant', 'nc|ENSG00000047644|Q9ULE0-2|WWC3', 'WWC3|p.P695Qfs*17|1|0.05|ENSG00000047644|chrX:10126284-10126296|CGCAGCTGCAGGA/-|frameshift_variant'] 87322 22543 QPRGRGQRGA True PC9_epitope_Rep6 1081.58532156033 1081.58422993586 99.725 2 -1.7832084409977835 0.44302289672210704 1.0 ['ENST00000471909.1_1_21:45217249-45223652:+|nuORF', 'ENST00000467112.5_1_21:45213150-45223652:+|nuORF', 'ENSG00000160214|ENST00000497547|RRP1'] 69149 5603 LTRRVSAGSPP True PC9_epitope_Rep6 1139.6411051009497 1139.63944490379 29.614 3 -1.7832289506554364 0.4430241535237675 1.0 ['ENST00000536017.1_1_11:64053594-64053642:+|nuORF'] 115993 22784 TSKRKTKIS True PC9_epitope_Rep3 1047.64004247179 1047.6389499358602 92.909 2 -1.7832419334326182 0.4430241535237675 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A', 'ENST00000531428.1_1_11:17099415-17121458:-|nuORF'] 29573 24835 FVIFMFFLN True H1975_Epitope_Rep1 1176.6041745570399 1176.60253490379 102.85 3 -1.783424615376606 0.44303643903299805 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 56943 13682 LDQNRIFDP True H1975_Epitope_Rep1 1116.55637241748 1116.55526993586 57.763 2 -1.7835117836799375 0.44303643903299805 1.0 ['ENSG00000134202|ENST00000361066|GSTM3', 'ENST00000488824.1_1_1:110279695-110282569:-|nuORF', 'ENST00000476321.5_1_1:110279982-110280760:-|nuORF'] 61785 22230 LLAPHMVP True PC9_epitope_Rep1 876.4891448048 876.48804993586 90.33 2 -1.7836977535320866 0.4430425815843746 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000149451|Q9BZ11-3|ADAM33'] 30717 13543 GALGRALSPL True PC9_epitope_Rep5 953.5658149023699 953.56470993586 57.115 2 -1.783893652000742 0.4430487240002647 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 62793 23836 LLLTLWVYAAF True PC9_epitope_Rep1 1308.7481959384402 1308.7465649037902 96.484 3 -1.783963614947274 0.44305486628067275 1.0 ['LTR12C_dup1159|chr6:63441884-63443495:-|1.4512251268435548|0.0180559155246374|6.33|493.0|46|3|sense'] 119364 13914 VAPETRAVI True PC9_epitope_Rep4 954.5498304850598 954.54872993586 61.423 2 -1.7840560125325617 0.4430720367021042 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 47540 25625 IVSRIQRYC True H1975_Epitope_Rep3 1136.6124478249599 1136.61134993586 106.65 2 -1.7841595879336518 0.44308432034231016 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 69700 7049 LVEELEPPS True NCI_RA007_Epitope_Rep1 1011.5124419168299 1011.51134993586 31.414 2 -1.7842248713458766 0.44308432034231016 1.0 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2', 'nc|ENSG00000114859|P51788-5|CLCN2', 'nc|ENSG00000114859|P51788-2|CLCN2', 'ENST00000485667.1_1_3:184073137-184079267:-|nuORF'] 122632 7336 VGFVGFVT True NCI_RA007_Epitope_Rep2 824.4432401581998 824.44214993586 33.158 2 -1.7844158266743415 0.4430883552733126 1.0 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 130484 5852 VSPPTHGR True PC9_epitope_Rep3 849.44569976969 849.44460993586 27.575 2 -1.7848636177658255 0.4430883552733126 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 82158 22271 PNLEDIYTSLC True PC9_epitope_Rep6 1266.5802042068199 1266.57856490379 98.636 3 -1.7848778154672789 0.4430883552733126 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 1764 10746 AEGTARQPLPI True H1975_Epitope_Rep1 1151.6298717109098 1151.6287699358602 46.299 2 -1.7848817699503352 0.4430883552733126 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 132748 17486 VVIMFLILG True NCI_RA007_Epitope_Rep5 1003.6140109647499 1003.61290993586 74.049 2 -1.7849326223628654 0.4430883552733126 1.0 ['ENST00000284617.6_1_1:229458648-229458729:-|nuORF'] 122766 14668 VGGMNRLP True PC9_epitope_Rep1 842.4432572415399 842.44214993586 61.241 2 -1.7849569941074102 0.4430883552733126 1.0 ['TP63|p.R319L|1|0.36|ENSG00000073282|chr3:189867906-189867906|G/T|missense_variant'] 34619 22897 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 94.518 2 -1.785113257404372 0.4430883552733126 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 67052 19482 LSPVRPQDLWI True H1975_Epitope_Rep1 1322.7346711326197 1322.73356993586 81.13 2 -1.7851631024459038 0.4430883552733126 1.0 ['ENST00000469998.1_1_9:140355949-140358668:-|nuORF', 'ENST00000492278.5_1_9:140357309-140358668:-|nuORF'] 18196 19241 EILQPLLEQGA True H1975_Epitope_Rep2 1209.66050313285 1209.65884490379 79.854 3 -1.7852239375255652 0.4430883552733126 1.0 ['ENSG00000138722|ENST00000264790|MMRN1'] 10412 17979 CGYPLVSC True NCI_RA007_Epitope_Rep5 840.35099664948 840.34988993586 75.943 2 -1.7852308460686896 0.4430883552733126 1.0 ['nc|ENSG00000135119|Q96EX2-2|RNFT2'] 94761 24734 RSKSKRLF True PC9_epitope_Rep4 1020.6192474575599 1020.61867496793 103.64 1 -1.785279871325548 0.4430883552733126 1.0 ['ENSG00000166035|ENST00000299022|LIPC'] 81207 14520 PKGRCGGP True H1975_Epitope_Rep2 770.3857423654199 770.38519496793 61.009 1 -1.785383554179247 0.4430883552733126 1.0 ['ENST00000215829.7_1_22:24951687-24951834:+|nuORF'] 60742 9304 LHRPQTTTS True PC9_epitope_Rep3 1039.54105670651 1039.53994993586 40.729 2 -1.7855222314687649 0.4430883552733126 1.0 ['ENST00000380913.7_1_X:9864694-9900474:+|nuORF'] 122085 15046 VGAAERGP True H1975_Epitope_Rep3 755.3926015676699 755.3920549679301 63.268 1 -1.7855342652853152 0.4430883552733126 1.0 ['ENST00000339852.4_1_19:39687849-39688705:+|nuORF'] 36600 6227 GVHSGPAH True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 30.558 2 -1.7855421872451722 0.4430883552733126 1.0 ['ENST00000589389.5_1_16:4854724-4855165:-|nuORF'] 31726 11184 GEGRGGHM True H1975_Epitope_Rep3 799.33952044899 799.3389749679301 48.117 1 -1.7855514116455784 0.4430883552733126 1.0 ['ENSG00000267221|ENST00000587304|C17orf113'] 11507 22700 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 93.753 3 -1.7855773586447388 0.4430883552733126 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 29581 25474 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 105.99 3 -1.7856701544434506 0.4430883552733126 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 92704 24833 RNRRHFERRL True PC9_epitope_Rep2 1438.8130300793798 1438.81192993586 101.21 2 -1.7857789260120907 0.4430883552733126 1.0 ['ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 79540 21942 PDCEQGKL True H1975_Epitope_Rep1 888.4011176460399 888.40002993586 91.27 2 -1.7858492609840806 0.4430883552733126 1.0 ['ENST00000520664.1_1_5:159845681-159845876:-|nuORF'] 43971 9178 IIEGAAQGK True NCI_RA007_Epitope_Rep1 885.4919812557699 885.49088993586 39.701 2 -1.7858767131115643 0.4430883552733126 1.0 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000582314.5_1_17:17997264-18003464:+|nuORF'] 19637 21380 ELQVKTCSF True PC9_epitope_Rep2 1053.5164817514499 1053.5153899358602 87.708 2 -1.7859057103306295 0.4430883552733126 1.0 ['ENST00000496080.1_1_7:149420759-149421776:+|nuORF'] 117588 10301 TVSRVSVI True PC9_epitope_Rep3 859.51271670035 859.51160993586 44.57 2 -1.785912110914236 0.4430883552733126 1.0 ['ENST00000583556.1_1_18:18550290-18550455:-|nuORF'] 117391 23498 TVPLTVRVP True PC9_epitope_Rep1 980.6018660579199 980.60076993586 95.172 2 -1.7859229746059029 0.4430883552733126 1.0 ['ENST00000314103.5_1_21:37757715-37758383:+|nuORF'] 122202 21550 VGALSPPP True PC9_epitope_Rep5 736.41194002992 736.41139496793 87.93 1 -1.7860015221632983 0.44309449522066524 1.0 ['ENSG00000198218|ENST00000395443|QRICH1'] 44600 10496 ILQPGKTIVI True NCI_RA007_Epitope_Rep2 1080.69068106232 1080.68958993586 45.422 2 -1.7860387476699708 0.4430957499586572 1.0 ['nc|ENSG00000172673|Q8N1K5-3|THEMIS', 'nc|ENSG00000172673|Q8N1K5-2|THEMIS', 'ENSG00000172673|ENST00000368248|THEMIS', 'nc|ENSG00000172673|Q8N1K5-4|THEMIS'] 72916 21357 MPVPPKPR True NCI_RA007_Epitope_Rep3 920.5265929426799 920.52548993586 92.829 2 -1.7860494102866904 0.4430957499586572 1.0 ['ENSG00000103194|ENST00000219473|USP10', 'nc|ENSG00000103194|Q14694-2|USP10', 'nc|ENSG00000103194|Q14694-3|USP10', 'ENST00000566378.1_1_16:84793488-84793554:+|nuORF'] 128798 9558 VPYYDLFM True NCI_RA007_Epitope_Rep4 1046.4783053375797 1046.4772099358602 43.613 2 -1.786107287090954 0.4431349635084779 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENST00000493492.2_1_13:98655270-98659627:+|nuORF'] 126431 14344 VLKLPVRSL True PC9_epitope_Rep5 1023.68045073179 1023.6793499358599 60.175 2 -1.7862390516677924 0.4431411026712382 1.0 ['ENSG00000132313|ENST00000337109|MRPL35', 'ENST00000404272.2_1_6:13949414-13949672:+|nuORF', 'nc|ENSG00000132313|Q9NZE8-2|MRPL35'] 29154 6025 FTPPQPAE True NCI_RA007_Epitope_Rep2 885.4232329896099 885.42212993586 28.044 2 -1.7864074037275495 0.44315714049495675 1.0 ['nc|ENSG00000198848|P23141-3|CES1', 'nc|ENSG00000198848|P23141|CES1', 'ENSG00000198848|ENST00000360526|CES1'] 112197 12672 TKGPRGPA True PC9_epitope_Rep6 782.4398861132598 782.4393349679301 60.211 1 -1.786427312225001 0.44315714049495675 1.0 ['ENST00000546023.1_1_6:160210088-160210586:-|nuORF'] 64722 12648 LPWFRTLSWYF True NCI_RA007_Epitope_Rep3 1514.77105664134 1514.76994993586 56.994 2 -1.7866243402003 0.44315714049495675 1.0 ['ENSG00000163624|ENST00000295887|CDS1', 'ENST00000467923.5_1_20:5107766-5163790:+|nuORF', 'nc|ENSG00000101290|O95674-2|CDS2', 'CDS2|p.G266Afs*15|1|0.22|ENSG00000101290|chr20:5185791-5185791|G/-|frameshift_variant', 'ENST00000468817.5_1_20:5109393-5167506:+|nuORF', 'ENST00000379070.3_1_20:5157275-5170877:+|nuORF', 'ENSG00000101290|ENST00000460006|CDS2'] 79576 7936 PDGPVFEM True H1975_Epitope_Rep3 890.3844049527399 890.38385496793 35.495 1 -1.7866351480314415 0.44315714049495675 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E922Sfs*10|1|0.13|ENSG00000048707|chr1:12276351-12276351|G/-|frameshift_variant'] 15104 24977 DYVPRKAKR True PC9_epitope_Rep3 1131.6512758618298 1131.6496349037902 101.42 3 -1.7866537613408116 0.44315714049495675 1.0 ['TCEAL5|p.T124Rfs*17|1|0.23|ENSG00000204065|chrX:103274195-103274195|C/-|frameshift_variant', 'nc|ENSG00000204071|Q6IPX3-2|TCEAL6', 'TCEAL6|p.G176Rfs*26|1|0.44|ENSG00000204071|chrX:102140806-102140807|-/T|frameshift_variant', 'TCEAL5|p.G189Efs*2|1|0.21|ENSG00000204065|chrX:103273998-103273998|C/-|frameshift_variant', 'ENSG00000204071|ENST00000372774|TCEAL6', 'nc|ENSG00000204071|Q6IPX3|TCEAL6', 'ENSG00000196507|ENST00000372627|TCEAL3', 'ENSG00000204065|ENST00000372680|TCEAL5'] 141014 23128 YSKLAFRTL True PC9_epitope_Rep2 1097.62332977849 1097.62222993586 94.454 2 -1.7866752651178601 0.44315714049495675 1.0 ['ENSG00000105865|ENST00000265720|DUS4L'] 68531 6084 LTGHLCAP True PC9_epitope_Rep1 810.40580910366 810.40470993586 28.216 2 -1.7867428982736915 0.44315714049495675 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 4407 17945 AIPSIMNVLL True NCI_RA007_Epitope_Rep5 1069.62055289717 1069.61944993586 75.811 2 -1.7867768886648616 0.44315714049495675 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant'] 82579 24797 PPVVGKVK True PC9_epitope_Rep4 822.5327238689399 822.53162993586 103.88 2 -1.7870488361524952 0.4431853256316416 1.0 ['ENSG00000102967|ENST00000219240|DHODH'] 83522 18160 PTTKVQKDP True PC9_epitope_Rep2 1012.5553097883197 1012.55420993586 75.157 2 -1.7871937860999527 0.4431890831330879 1.0 ['PEAK1-TSPAN3|1|fusion', 'PEAK1-TSPAN3|2|fusion', 'PEAK1|p.K1454Rfs*15|1|0.13|ENSG00000173517|chr15:77115025-77115038|GGCTCCTCTGCTTC/-|frameshift_variant', 'ENSG00000173517|ENST00000682557|PEAK1'] 5548 11318 AMPSGSHS True NCI_RA007_Epitope_Rep5 772.3173880220802 772.31628993586 50.182 2 -1.7872356163852798 0.4431890831330879 1.0 ['ENST00000424460.1_1_7:8380649-8382766:+|nuORF', 'ENST00000435967.1_1_7:8380649-8380892:+|nuORF'] 59506 16206 LFRMLIRLL True PC9_epitope_Rep6 1173.74200544253 1173.7403549037901 74.691 3 -1.7872433839163944 0.4431890831330879 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 102092 13977 SLRGRRTWVR True PC9_epitope_Rep4 1285.7479702113299 1285.74686993586 61.668 2 -1.7872575453179758 0.4431890831330879 1.0 ['ENST00000313146.10_1_1:156697789-156698104:-|nuORF'] 137280 4529 YCRRWRYWEYW True NCI_RA007_Epitope_Rep2 1765.7936000744096 1765.79194490379 22.246 3 -1.7872976989568745 0.4431890831330879 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 124111 10501 VGSPPGPG True NCI_RA007_Epitope_Rep5 666.33368970922 666.33314496793 47.025 1 -1.7872977441642846 0.4431890831330879 1.0 ['ENSG00000083290|ENST00000395544|ULK2'] 66998 22400 LSPLELGYVR True PC9_epitope_Rep1 1145.64445914589 1145.6433699358602 90.981 2 -1.7873454500551802 0.443206243179789 1.0 ['ENST00000575142.5_1_17:4862632-4862689:-|nuORF'] 78006 6805 NVPLEREA True H1975_Epitope_Rep2 926.48214484806 926.48104993586 31.093 2 -1.7874136032581398 0.443219769197703 1.0 ['nc|ENSG00000078674|Q15154-2|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1', 'ENSG00000078674|ENST00000325083|PCM1'] 48566 1944 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 10.083 3 -1.7876330755823884 0.443219769197703 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 38800 17112 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 72.592 2 -1.7877426110024464 0.443219769197703 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 87651 24854 QQRRKLLP True NCI_RA007_Epitope_Rep5 1037.6457965585696 1037.64468993586 103.09 2 -1.7877486185986726 0.443219769197703 1.0 ['ENSG00000146950|ENST00000380913|SHROOM2'] 79514 14314 PCIYRNTG True NCI_RA007_Epitope_Rep3 922.43308648066 922.43198993586 63.621 2 -1.7880726500742854 0.44328851664095215 1.0 ['nc|ENSG00000143416|Q13228-3|SELENBP1', 'ENSG00000143416|ENST00000368868|SELENBP1', 'nc|ENSG00000143416|Q13228-4|SELENBP1', 'ENST00000474352.5_1_1:151341776-151342064:-|nuORF', 'ENST00000493560.5_1_1:151341776-151345168:-|nuORF'] 56403 8014 LDEAQERSV True H1975_Epitope_Rep2 1045.50400249145 1045.50290993586 35.774 2 -1.7882213903567503 0.44328851664095215 1.0 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-3|DQX1', 'ENST00000473508.1_1_2:74750418-74753390:-|nuORF', 'nc|ENSG00000144045|Q8TE96-2|DQX1', 'ENST00000495597.1_1_2:74751010-74751370:-|nuORF'] 139707 13621 YNLYIVENPHY True PC9_epitope_Rep1 1423.6772158261501 1423.67610993586 57.25 2 -1.7882845813542725 0.44328851664095215 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 86304 6751 QISLVGAVDEE True PC9_epitope_Rep3 1158.5768330785397 1158.5757299358602 30.99 2 -1.7882867222307748 0.44328851664095215 1.0 ['RSBN1|p.I675Mfs*15|1|0.2|ENSG00000081019|chr1:113766346-113766364|ATTTCTAGGGATGAAGTAG/-|frameshift_variant', 'ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF', 'ENST00000468035.1_1_7:77394853-77402638:+|nuORF', 'PTPN12-RSBN1L|4|fusion', 'PTPN12-RSBN1L|5|fusion', 'PTPN12-RSBN1L|1|fusion', 'PTPN12-RSBN1L|2|fusion', 'PTPN12-RSBN1L|6|fusion', 'PTPN12-RSBN1L|3|fusion', 'PTPN12-RSBN1L|7|fusion', 'PTPN12-RSBN1L|8|fusion', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L', 'ENSG00000187257|ENST00000334955|RSBN1L'] 87495 5186 QQEYLDTYYNL True H1975_Epitope_Rep3 1448.6459752675198 1448.64486993586 25.044 2 -1.7883124473295866 0.44328851664095215 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 53587 24837 KRRKTSVF True NCI_RA007_Epitope_Rep5 1020.6192474575599 1020.61814993586 103.02 2 -1.7883540824347905 0.44328851664095215 1.0 ['ENST00000539976.1_1_16:89981432-89981549:+|nuORF'] 102839 4843 SNRYYFTVQS True H1975_Epitope_Rep3 1263.5884008217502 1263.58730993586 23.754 2 -1.7885026233812478 0.44328851664095215 1.0 ['ENSG00000166669|ENST00000562102|ATF7IP2'] 32726 12721 GGWPGGHL True NCI_RA007_Epitope_Rep3 779.3714722002699 779.37036993586 57.273 2 -1.7885189323571482 0.44328851664095215 1.0 ['ENST00000309100.7_1_11:65380814-65380982:-|nuORF'] 89079 14238 QVNGHGGQ True NCI_RA007_Epitope_Rep5 795.3623640685498 795.36126993586 61.458 2 -1.7886886520507133 0.44328851664095215 1.0 ['ENSG00000146247|ENST00000275034|PHIP', 'ENST00000479165.1_1_6:79650412-79665440:-|nuORF'] 81606 17129 PLLALTTT True NCI_RA007_Epitope_Rep5 828.4956696538801 828.49456993586 72.659 2 -1.788716136795694 0.44328851664095215 1.0 ['PI4KB|p.R366Efs*33|1|0.12|ENSG00000143393|chr1:151307660-151307660|G/-|frameshift_variant'] 139769 26029 YPEYLSNFP True PC9_epitope_Rep2 1128.51277627 1128.51112490379 106.01 3 -1.788724815124393 0.44328851664095215 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 112691 11701 TLGGRHGC True H1975_Epitope_Rep2 799.37590595771 799.3753549679301 50.082 1 -1.7887971081839595 0.44328851664095215 1.0 ['ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 140981 23818 YSHCSRQT True NCI_RA007_Epitope_Rep5 980.41341366524 980.41230993586 98.981 2 -1.788810990048472 0.44328851664095215 1.0 ['ENST00000360943.9_1_17:47004499-47005111:+|nuORF'] 82460 23666 PPPYHDAL True NCI_RA007_Epitope_Rep5 908.43921740692 908.43812993586 98.362 2 -1.789009626346253 0.44330078684622337 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 90726 23805 REREGRLRA True PC9_epitope_Rep2 1141.64283643645 1141.6417299358602 97.036 2 -1.7890510432783018 0.44330078684622337 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF'] 99011 8339 SHDTLQELTAH True H1975_Epitope_Rep3 1250.5891290977402 1250.58802993586 37.06 2 -1.7895285117056812 0.4433620224149521 1.0 ['TSHZ3|p.S682Afs*14|1|0.34|ENSG00000121297|chr19:31277750-31277750|C/-|frameshift_variant', 'ENSG00000121297|ENST00000240587|TSHZ3'] 44299 16491 ILDEQGRTV True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 68.432 2 -1.789589985554658 0.44336940471205344 1.0 ['ENSG00000117360|ENST00000324862|PRPF3', 'nc|ENSG00000117360|O43395-3|PRPF3', 'ENST00000467329.5_1_1:150300781-150316915:+|nuORF'] 124078 15630 VGSLPKAI True NCI_RA007_Epitope_Rep5 783.48543932335 783.48489496793 66.829 1 -1.7896374447178447 0.44336940471205344 1.0 ['ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 8414 6413 ATLTLTLR True PC9_epitope_Rep1 887.54401682863 887.54290993586 29.474 2 -1.7896630484119358 0.44336940471205344 1.0 ['ENSG00000019505|ENST00000020926|SYT13', 'SYT13|p.D247H|1|0.21|ENSG00000019505|chr11:45252528-45252528|C/G|missense_variant'] 87029 10183 QMRRKHYYRSY True PC9_epitope_Rep3 1586.78884904714 1586.78719490379 44.12 3 -1.7898243383019175 0.4433755385852976 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 48623 24748 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 102.93 3 -1.7899243670371705 0.4433926918499581 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 122317 20275 VGCGFCGK True NCI_RA007_Epitope_Rep2 769.3251162548099 769.3245649679301 83.898 1 -1.7899782860047346 0.4433988253314086 1.0 ['ENSG00000135220|ENST00000251566|UGT2A3'] 48316 14604 IYRFLPFFFV True PC9_epitope_Rep5 1347.7379656079097 1347.73633490379 61.175 3 -1.7901977444477484 0.4434221110511179 1.0 ['ENSG00000168273|ENST00000477703|UQCC5'] 20901 9118 EQLQREYSKL True H1975_Epitope_Rep3 1292.6724647988797 1292.6713699358602 40.061 2 -1.7902025710347225 0.4434221110511179 1.0 ['nc|ENSG00000269335|Q9Y6K9-2|IKBKG', 'ENSG00000269335|ENST00000594239|IKBKG', 'nc|ENSG00000269335|Q9Y6K9-3|IKBKG'] 10722 17640 CRTHQAFMR True H1975_Epitope_Rep2 1148.53315195844 1148.53257496793 73.169 1 -1.7903430919015146 0.4434233579055238 1.0 ['ENSG00000115232|ENST00000397033|ITGA4', 'ENST00000476824.1_1_2:182363351-182392165:+|nuORF'] 79525 20206 PCRKQRRRRK True NCI_RA007_Epitope_Rep5 1382.8265719685398 1382.8254699358602 84.665 2 -1.7904039203972915 0.4434233579055238 1.0 ['ROR2|p.E902Pfs*82|1|0.16|ENSG00000169071|chr9:91723772-91723790|TGCTCTGGGCCCCATCTTC/-|frameshift_variant'] 31114 6353 GAVPPAPW True NCI_RA007_Epitope_Rep5 793.41227438309 793.41116993586 31.112 2 -1.7905096200287303 0.44344050950922276 1.0 ['ENST00000480687.5_1_3:49760143-49760471:-|nuORF'] 908 11562 ADLRAHRRT True NCI_RA007_Epitope_Rep1 1094.6057226517398 1094.6046299358602 48.943 2 -1.7907671995633692 0.4434796980882596 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 82532 10188 PPRRRLCQRRH True H1975_Epitope_Rep1 1473.83238562497 1473.83128993586 44.128 2 -1.7909820385783217 0.4434932072852279 1.0 ['ENST00000395824.5_1_17:16472307-16472361:-|nuORF'] 26069 25422 FGLAALLAAA True PC9_epitope_Rep2 916.5382031721999 916.53710993586 103.47 2 -1.7910110110340294 0.4434932072852279 1.0 ['nc|ENSG00000018280|P49279-2|SLC11A1', 'ENSG00000018280|ENST00000233202|SLC11A1'] 126606 5896 VLM[Oxidation]EEMILYY True H1975_Epitope_Rep1 1318.6188985950998 1318.6178099358601 27.75 2 -1.7910519499567614 0.4434932072852279 1.0 ['nc|ENSG00000196116|Q8NHU6-3|TDRD7', 'nc|ENSG00000196116|Q8NHU6-2|TDRD7', 'ENSG00000196116|ENST00000355295|TDRD7'] 92493 19282 RLWPTLSKS True PC9_epitope_Rep2 1086.61857875122 1086.61807496793 79.543 1 -1.7911423392154748 0.4434932072852279 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2'] 48570 3679 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 18.604 3 -1.7912949070843547 0.44352137505509037 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 94087 25058 RRLKKKKTTIK True PC9_epitope_Rep2 1398.9510866919798 1398.94998993586 102.05 2 -1.7914400641785952 0.44354954220425075 1.0 ['SYT6|p.K488Sfs*12|1|0.38|ENSG00000134207|chr1:114097781-114097781|C/-|frameshift_variant', 'ENSG00000134207|ENST00000610222|SYT6', 'nc|ENSG00000134207|Q5T7P8-2|SYT6'] 48614 28150 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 117.45 3 -1.7915182899484745 0.44356669090588574 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 79936 9211 PERRRPGR True H1975_Epitope_Rep1 1022.5845932843398 1022.58348993586 40.339 2 -1.7916454130585278 0.44357282152418936 1.0 ['ENSG00000226174|ENST00000451127|TEX22'] 34558 23375 GPSRKLWR True PC9_epitope_Rep6 998.5773826455799 998.57628993586 103.02 2 -1.791681917866761 0.443581438392385 1.0 ['ENST00000405405.2_1_6:80663080-80663251:-|nuORF'] 110492 7518 TFGGLGSL True PC9_epitope_Rep5 750.39120458534 750.39010993586 33.868 2 -1.7917400581999432 0.443581438392385 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 95264 21911 RVPCLIPP True PC9_epitope_Rep3 893.5156939058099 893.51458993586 89.581 2 -1.791742182417696 0.443581438392385 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 120977 19970 VEPKRQKLRA True NCI_RA007_Epitope_Rep2 1223.7462388758297 1223.74567496793 82.679 1 -1.791785275669556 0.443581438392385 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 97209 3976 SDYSFSVIAMS True H1975_Epitope_Rep3 1205.52744035797 1205.52634993586 20.421 2 -1.7918799991695002 0.443581438392385 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 126036 14025 VLEALWRI True PC9_epitope_Rep5 998.5913013742199 998.59020993586 58.965 2 -1.7919183032689934 0.4435875684429706 1.0 ['ENST00000479722.1_1_10:101373360-101379897:-|nuORF', 'ENSG00000155287|ENST00000370495|SLC25A28'] 25781 8546 FEVPEMSP True H1975_Epitope_Rep2 934.4106197005799 934.4100749679301 37.827 1 -1.791934649865388 0.4435936983584885 1.0 ['ENSG00000104953|ENST00000246112|TLE6', 'ENST00000497878.5_1_19:2988043-2994999:+|nuORF', 'nc|ENSG00000104953|Q9H808-2|TLE6'] 21965 8856 ESEIARLEEDK True H1975_Epitope_Rep1 1317.6412242402496 1317.6401299358602 38.987 2 -1.7921238034745592 0.44361084487336266 1.0 ['nc|ENSG00000173588|Q9Y592-2|CEP83', 'ENSG00000173588|ENST00000397809|CEP83'] 66131 6229 LSELPQEIGN True NCI_RA007_Epitope_Rep1 1098.55570371114 1098.55460993586 28.262 2 -1.7923671159903447 0.4436353621591848 1.0 ['ENSG00000137269|ENST00000370888|LRRC1', 'ENST00000487251.5_1_6:53762124-53769284:+|nuORF'] 53481 18293 KRHRGKSLK True NCI_RA007_Epitope_Rep5 1108.6941437333198 1108.69304993586 77.163 2 -1.792431124351583 0.4436353621591848 1.0 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1'] 32438 21234 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 88.717 2 -1.7924690609764817 0.4436353621591848 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 32631 11287 GGLLAFAK True PC9_epitope_Rep2 775.45922457551 775.45812993586 48.739 2 -1.7925028516039851 0.4436353621591848 1.0 ['ENSG00000062822|ENST00000440232|POLD1', 'ENST00000597963.5_1_19:50919583-50921201:+|nuORF'] 9131 13063 AVKFKTTHAP True PC9_epitope_Rep2 1098.61857875122 1098.61748993586 55.525 2 -1.7925705912916479 0.4436525072706442 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6', 'nc|ENSG00000173826|Q9H252-2|KCNH6', 'ENSG00000173826|ENST00000314672|KCNH6'] 89913 7636 RCPKEVYPHVS True NCI_RA007_Epitope_Rep1 1313.65504091293 1313.65394993586 33.695 2 -1.7926002847241658 0.44365863599810523 1.0 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.A751Sfs*3|1|0.42|ENSG00000111530|chr12:67305910-67305911|-/A|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'nc|ENSG00000111530|Q86VP6-3|CAND1'] 7683 5270 ASLHVWGW True PC9_epitope_Rep5 954.47118624154 954.47008993586 25.287 2 -1.792874525621604 0.44368314955772686 1.0 ['ENSG00000144407|ENST00000272847|PTH2R', 'PTH2R|p.L4Q|1|0.15|ENSG00000144407|chr2:208407054-208407054|T/A|missense_variant'] 137940 20800 YFEGIHLD True NCI_RA007_Epitope_Rep5 992.46034677432 992.45924993586 86.986 2 -1.792899149099978 0.44368314955772686 1.0 ['ENSG00000176208|ENST00000321990|ATAD5'] 139709 12464 YNLYIVENPHY True PC9_epitope_Rep4 1423.6772158261501 1423.67610993586 55.749 2 -1.7929010293601766 0.44368314955772686 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 109114 6331 TALLVIIIII True PC9_epitope_Rep2 1080.75221868972 1080.75112993586 29.75 2 -1.7929258048344403 0.44368314955772686 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 36174 16014 GVAVGGFP True PC9_epitope_Rep2 702.37007521794 702.36952496793 66.852 1 -1.7929717557820424 0.4436892776100989 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 13177 27247 DLRVHMRNLHA True PC9_epitope_Rep1 1360.7146214777201 1360.7129849037901 111.35 3 -1.7931980456882541 0.4436954055274666 1.0 ['nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL'] 65560 22293 LRRRRREVEA True PC9_epitope_Rep6 1339.7908976524698 1339.78924490379 98.721 3 -1.793228487973682 0.4437015333098343 1.0 ['LMNB1|p.L380Hfs*32|1|0.07|ENSG00000113368|chr5:126819120-126819121|-/ATATTTACTT|frameshift_variant'] 128957 23763 VQILLKDPI True NCI_RA007_Epitope_Rep4 1037.6484818971699 1037.64738993586 103.02 2 -1.7933308694425305 0.4437076609572066 1.0 ['ENST00000462171.1_1_1:20076843-20097914:-|nuORF', 'nc|ENSG00000162542|Q5TGY1-2|TMCO4', 'ENSG00000162542|ENST00000294543|TMCO4'] 74446 5659 NEVDLLGPNQ True PC9_epitope_Rep5 1097.53530261973 1097.5342099358602 26.765 2 -1.7935451985750994 0.44370897396361075 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'PUM1-NKAIN1|3|fusion'] 82274 25158 PPGHEPGS True PC9_epitope_Rep1 776.3453170220799 776.34420993586 101.65 2 -1.7938221526428066 0.44370897396361075 1.0 ['ENST00000376227.3_1_X:49093621-49098531:+|nuORF'] 48591 26772 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 111.51 3 -1.7939780598024186 0.44370897396361075 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 17814 19255 EHSTFSMA True NCI_RA007_Epitope_Rep5 908.36981751776 908.36872993586 80.93 2 -1.7939928205665612 0.44370897396361075 1.0 ['ENSG00000101188|ENST00000370501|NTSR1'] 129415 22009 VRFLSGRA True PC9_epitope_Rep6 904.5242844435598 904.52318993586 97.58 2 -1.7939990910673436 0.44370897396361075 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2', 'ENST00000475900.1_1_2:29256310-29268401:+|nuORF'] 22645 7819 ETPAISPSK True H1975_Epitope_Rep3 928.48656152216 928.48546993586 35.054 2 -1.7940492086793391 0.44370897396361075 1.0 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 8845 20654 AVEVALTRA True PC9_epitope_Rep2 928.5341804209199 928.53308993586 84.882 2 -1.7940536438892243 0.44370897396361075 1.0 ['ENSG00000185105|ENST00000409745|MYADML2'] 46778 12505 ITFPDGRSL True PC9_epitope_Rep3 1004.5290950404799 1004.52798993586 53.126 2 -1.7941810332109862 0.44370897396361075 1.0 ['ENSG00000186160|ENST00000334194|CYP4Z1'] 124110 10408 VGSPPGPG True NCI_RA007_Epitope_Rep5 666.33368970922 666.33314496793 46.662 1 -1.7942130469083717 0.44370897396361075 1.0 ['ENSG00000083290|ENST00000395544|ULK2'] 142195 23635 YVVMLYVV True PC9_epitope_Rep2 984.5354262908797 984.53432993586 96.384 2 -1.7944184335682016 0.44370897396361075 1.0 ['nc|ENSG00000186575|P35240-2|NF2'] 132038 11184 VTTAAIRI True PC9_epitope_Rep1 843.5178020807899 843.51670993586 47.903 2 -1.7944942096302974 0.44370897396361075 1.0 ['GJB4|p.C197R|1|0.67|ENSG00000189433|chr1:34761843-34761843|T/C|missense_variant'] 69951 16357 LVLAPLGNS True PC9_epitope_Rep5 882.5174677276201 882.51636993586 67.915 2 -1.794508440481768 0.44371510071918674 1.0 ['ENST00000369763.4_1_1:111506314-111506515:-|nuORF'] 108165 7752 SYFSNAPV True PC9_epitope_Rep5 883.4075829254699 883.40648993586 34.759 2 -1.7945783608246892 0.4437273538254827 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 16018 7080 EDTELQRK True NCI_RA007_Epitope_Rep2 1017.5090878718898 1017.50798993586 32.164 2 -1.794652320856885 0.4437273538254827 1.0 ['nc|ENSG00000114993|Q9BST9-2|RTKN', 'ENSG00000114993|ENST00000272430|RTKN', 'ENST00000464094.2_1_2:74659592-74666815:-|nuORF', 'ENST00000472518.1_1_2:74659592-74668973:-|nuORF'] 103447 21397 SPPTGDSGKVD True PC9_epitope_Rep1 1058.48801807414 1058.48747496793 87.137 1 -1.7947245638287854 0.44373348017621145 1.0 ['nc|ENSG00000141750|Q6ZMT1-2|STAC2', 'ENSG00000141750|ENST00000333461|STAC2'] 72349 13240 MIRGCGGG True PC9_epitope_Rep2 749.3312642644099 749.33016993586 56.204 2 -1.7947462727837709 0.4437396063920001 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 73747 17848 NADINPLKI True PC9_epitope_Rep3 996.5603951687599 996.55928993586 73.848 2 -1.7948702675884383 0.44374084556677645 1.0 ['ENSG00000164171|ENST00000296585|ITGA2', 'ITGA2|p.G1029V|1|0.24|ENSG00000164171|chr5:53081638-53081638|G/T|missense_variant'] 122038 23174 VFVVLEPCRRR True PC9_epitope_Rep6 1372.7761591051196 1372.77506993586 102.24 2 -1.7949131081357508 0.44374084556677645 1.0 ['ENST00000518921.1_1_8:63056787-63057258:-|nuORF'] 138 5178 AACSLEDWPP True PC9_epitope_Rep3 1087.46444617859 1087.4633499358602 25.0 2 -1.794987242051996 0.4437530972964044 1.0 ['PAPLN|p.R468W|1|0.17|ENSG00000100767|chr14:73254612-73254612|C/T|missense_variant'] 121517 19199 VFAAYGGL True PC9_epitope_Rep3 796.4119400299198 796.41084993586 79.066 2 -1.7950028988484248 0.4437530972964044 1.0 ['ENSG00000141232|ENST00000499247|TOB1'] 38049 22714 HASLQHRKP True PC9_epitope_Rep2 1072.58900995844 1072.5879099358601 92.865 2 -1.7950876365991673 0.4437592229588353 1.0 ['ENSG00000174945|ENST00000683327|AMZ1', 'nc|ENSG00000174945|Q400G9-2|AMZ1'] 18169 7904 EIKSIQDDF True PC9_epitope_Rep3 1093.52915461013 1093.52804993586 35.384 2 -1.7951443514506518 0.4437763608532382 1.0 ['ENSG00000150628|ENST00000280191|SPATA4'] 135341 23615 WGLDLLDRYVK True PC9_epitope_Rep1 1376.7452358163198 1376.7441299358602 95.625 2 -1.7951847428035603 0.44378861126099833 1.0 ['ENSG00000125733|ENST00000313244|TRIP10', 'nc|ENSG00000125733|Q15642-5|TRIP10', 'nc|ENSG00000125733|Q15642-4|TRIP10', 'ENST00000595305.5_1_19:6739772-6750443:+|nuORF', 'nc|ENSG00000125733|Q15642-2|TRIP10', 'nc|ENSG00000125733|Q15642-3|TRIP10', 'ENST00000595319.5_1_19:6741032-6741137:+|nuORF', 'TRIP10|p.F83Cfs*9|1|0.06|ENSG00000125733|chr19:6743016-6743017|TT/-|frameshift_variant', 'ENST00000596078.5_1_19:6741032-6743282:+|nuORF', 'TRIP10|p.R113Hfs*23|1|0.09|ENSG00000125733|chr19:6743101-6743102|-/GGAGCATCTG|frameshift_variant'] 83244 6223 PSWRQCRNDYR True H1975_Epitope_Rep1 1479.6789642449899 1479.6778699358601 29.005 2 -1.7951967096580563 0.44378861126099833 1.0 ['ENST00000517608.5_1_8:74742652-74791068:-|nuORF'] 20198 9044 ENILTNYENQ True H1975_Epitope_Rep3 1236.5622456435601 1236.5611499358602 39.775 2 -1.7952504808058134 0.44380574826560953 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 80035 10120 PFGKGGAG True H1975_Epitope_Rep1 689.3496741265299 689.34912496793 43.864 1 -1.7952975094806194 0.44381187301097885 1.0 ['ENST00000374825.8_1_6:32936649-32936823:+|nuORF'] 45889 7446 ISDSEPKP True H1975_Epitope_Rep3 871.4287122928699 871.42816496793 33.62 1 -1.7953699374038792 0.4438302464377739 1.0 ['ENST00000523812.1_1_8:144357822-144358971:+|nuORF'] 53889 25025 KTLKIPPE True PC9_epitope_Rep3 924.5644179200399 924.56332993586 101.6 2 -1.7954010202826536 0.4438302464377739 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|30|2|sense'] 63370 7918 LLVAQPLLQ True H1975_Epitope_Rep1 993.6222671493299 993.6211699358599 35.407 2 -1.7954128180197026 0.4438302464377739 1.0 ['ENSG00000266714|ENST00000645453|MYO15B'] 8734 6183 AVAVAAPRP True NCI_RA007_Epitope_Rep3 850.50248636982 850.50138993586 31.328 2 -1.7954977408527415 0.44383637064361614 1.0 ['ENST00000339176.7_1_16:67918814-67919670:+|nuORF'] 122841 10454 VGGVGGCP True PC9_epitope_Rep1 644.29519602552 644.29464496793 45.098 1 -1.7956128009115555 0.4438535059901339 1.0 ['ENST00000494815.1_1_11:864058-865677:+|nuORF'] 95751 13696 RYHRHRHIEWA True NCI_RA007_Epitope_Rep1 1559.79704566207 1559.79594993586 57.288 2 -1.7956477846547896 0.44385962980499244 1.0 ['TRIM49C|p.P128H|1|0.56|ENSG00000204449|chr11:90035594-90035594|C/A|missense_variant'] 117795 23409 TVWGREKAY True PC9_epitope_Rep1 1108.5665431783598 1108.5654499358602 94.827 2 -1.7956664776117268 0.44386086611832326 1.0 ['ENST00000360635.7_1_2:9547636-9547675:-|nuORF'] 136531 15206 WWDIYYTLFEK True NCI_RA007_Epitope_Rep2 1562.7445671099797 1562.74397496793 63.841 1 -1.7957194772730014 0.44386086611832326 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 48571 3748 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 18.948 3 -1.7958105481878488 0.44387800044043163 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 58108 22594 LEKGKKER True PC9_epitope_Rep2 986.58727862294 986.58673496793 92.408 1 -1.795877908586875 0.44389024685648854 1.0 ['ENST00000372562.1_1_1:42921808-42921991:+|nuORF'] 38792 22386 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 92.516 2 -1.795888483996393 0.44389024685648854 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 138304 5828 YHDGAATFLL True PC9_epitope_Rep4 1106.53965972418 1106.53856993586 29.281 2 -1.7959728738349061 0.44389636986225955 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 111357 1191 THQQLMEKKGC True H1975_Epitope_Rep1 1301.6220265324898 1301.62039490379 6.2037 3 -1.7960566764740205 0.44390249273319826 1.0 ['nc|ENSG00000168394|Q03518-2|TAP1', 'ENSG00000168394|ENST00000354258|TAP1'] 96585 12627 SAFSSGLPG True PC9_epitope_Rep3 821.3919328613299 821.3913849679301 53.594 1 -1.79611820429159 0.4439086154693091 1.0 ['nc|ENSG00000182871|P39060|COL18A1'] 42304 6843 IDWIEETIASH True NCI_RA007_Epitope_Rep2 1312.62993128056 1312.62882993586 31.235 2 -1.7961953208833128 0.44393310506556277 1.0 ['ENSG00000219073|ENST00000337107|CELA3B', 'ENSG00000142789|ENST00000290122|CELA3A'] 29602 24413 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 105.95 3 -1.7962779199970982 0.44393310506556277 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 14524 7060 DTMFLKCI True PC9_epitope_Rep5 969.4663607548899 969.46526993586 32.124 2 -1.7963050967409582 0.44393310506556277 1.0 ['nc|ENSG00000056558|Q13077-2|TRAF1', 'ENSG00000056558|ENST00000373887|TRAF1'] 58484 11384 LEQCRQLYWRR True NCI_RA007_Epitope_Rep2 1549.7936000744098 1549.7925099358602 48.87 2 -1.7963140112827511 0.44393310506556277 1.0 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 101197 10283 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 46.183 2 -1.7965558173563143 0.44393433959771444 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 44387 15608 ILFCFQHL True H1975_Epitope_Rep3 1019.52625858951 1019.52516993586 65.452 2 -1.7965710850949177 0.44393433959771444 1.0 ['ENST00000377474.3_1_13:77457448-77457556:-|nuORF'] 129432 25241 VRGKCLVS True H1975_Epitope_Rep2 860.49020743396 860.48965496793 103.69 1 -1.796788258258732 0.44396248018319534 1.0 ['ENST00000307602.8_1_8:42879272-42879317:+|nuORF'] 61605 21268 LKLHPCLA True PC9_epitope_Rep4 893.5156939058099 893.51458993586 89.976 2 -1.7969853192586878 0.4439857322148094 1.0 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000585104.1_1_17:62477530-62481889:-|nuORF'] 41328 10756 HVWTARPSQ True NCI_RA007_Epitope_Rep5 1080.54647644012 1080.5453699358602 48.011 2 -1.7969923961299648 0.4439857322148094 1.0 ['ENST00000310074.7_1_4:7057430-7057760:+|nuORF'] 122986 10624 VGIAYLGGV True H1975_Epitope_Rep3 847.4803539429099 847.47924993586 45.936 2 -1.7972253170814803 0.44401510397745414 1.0 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17', 'ENST00000559976.1_1_15:100708871-100801709:-|nuORF', 'nc|ENSG00000140470|Q8TE56-2|ADAMTS17'] 109524 8774 TDQFTITMW True NCI_RA007_Epitope_Rep2 1141.5113963710098 1141.51028993586 38.776 2 -1.7972641097924962 0.44401510397745414 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant'] 48569 3264 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 16.578 3 -1.7972656048900377 0.44401510397745414 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 82533 10362 PPRRRLCQRRH True H1975_Epitope_Rep3 1473.83238562497 1473.83128993586 44.912 2 -1.797576503108483 0.4440762676412955 1.0 ['ENST00000395824.5_1_17:16472307-16472361:-|nuORF'] 72700 11584 MMLQDQEHHWY True H1975_Epitope_Rep3 1516.62275480848 1516.6216499358602 49.686 2 -1.7977636596773228 0.4441044044958663 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 57197 23676 LDVNENLHPPH True H1975_Epitope_Rep3 1283.62584895963 1283.62474993586 98.752 2 -1.7977792278517737 0.44411052399823864 1.0 ['FAT2|p.C4267Lfs*4|1|0.36|ENSG00000086570|chr5:151505816-151505817|-/G|frameshift_variant', 'ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.L2931Wfs*101|1|0.21|ENSG00000086570|chr5:151542336-151542336|G/-|frameshift_variant', 'FAT2|p.E2578Dfs*50|1|0.03|ENSG00000086570|chr5:151543393-151543394|-/TAACCCAG|frameshift_variant', 'FAT2|p.S1818Afs*5|1|0.17|ENSG00000086570|chr5:151545676-151545676|G/-|frameshift_variant'] 55339 25080 LAEIIYWIRC True PC9_epitope_Rep5 1278.6794647556198 1278.67780490379 101.61 3 -1.798072206671658 0.44411298489718637 1.0 ['ENSG00000224420|ENST00000420022|ADM5'] 58205 9061 LELDYELAEQL True H1975_Epitope_Rep1 1334.6605627024999 1334.6594699358602 39.762 2 -1.7981814353804602 0.44411298489718637 1.0 ['COL6A3|p.D2012E|1|0.04|ENSG00000163359|chr2:237363280-237363280|G/T|missense_variant'] 80811 22380 PHNPAVRT True PC9_epitope_Rep5 890.4722488707 890.47114993586 91.097 2 -1.7981928592502063 0.44411298489718637 1.0 ['ENST00000478770.6_1_1:2113296-2116445:+|nuORF'] 32720 5103 GGVSSGPG True H1975_Epitope_Rep3 616.28165413636 616.2811049679301 24.74 1 -1.798217386323153 0.44411298489718637 1.0 ['ENST00000361981.7_1_X:153127328-153128099:-|nuORF'] 59684 19393 LGAPDVLP True NCI_RA007_Epitope_Rep4 780.43815477776 780.43760496793 83.863 1 -1.798429609690052 0.4441411194892399 1.0 ['ENST00000394266.8_1_16:58549747-58550573:+|nuORF'] 29632 24110 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 106.34 3 -1.7985404674604177 0.44416925346190256 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 61847 4915 LLAVTFAA True NCI_RA007_Epitope_Rep5 804.47454028648 804.47344993586 25.601 2 -1.7986908346608053 0.44424141688773433 1.0 ['nc|ENSG00000128040|P20155|SPINK2'] 29604 24567 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 106.68 3 -1.798809946532553 0.4442426443879404 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 129121 23654 VQQQRILS True PC9_epitope_Rep4 970.5559784946599 970.55488993586 99.328 2 -1.7989478945373654 0.4442426443879404 1.0 ['CDH10|p.P32Q|1|0.31|ENSG00000040731|chr5:24593396-24593396|G/T|missense_variant'] 81244 5415 PKKKKPLKLGP True PC9_epitope_Rep1 1232.8332629750798 1232.83216993586 25.663 2 -1.7990829256019512 0.4442720028177696 1.0 ['ENSG00000104332|ENST00000220772|SFRP1'] 18421 9814 EIWFRFFFVVL True NCI_RA007_Epitope_Rep2 1501.81219317733 1501.81054490379 42.797 3 -1.7991389814190573 0.4442720028177696 1.0 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 55550 19252 LAGQPGRR True PC9_epitope_Rep5 853.48823328801 853.48712993586 79.094 2 -1.7991461276405658 0.4442720028177696 1.0 ['ENST00000261917.3_1_15:73660243-73660336:-|nuORF'] 123191 20160 VGLCLFPIKYL True PC9_epitope_Rep6 1264.72535231888 1264.7242499358601 90.218 2 -1.7994786521641493 0.4443331535557439 1.0 ['ENST00000309922.6_1_3:101284860-101285061:+|nuORF'] 53480 18600 KRHQRKVP True NCI_RA007_Epitope_Rep2 1047.6413798844699 1047.6402899358602 77.148 2 -1.7998194552459346 0.4443698625614842 1.0 ['ENSG00000102575|ENST00000648477|ACP5', 'ENST00000590420.1_1_19:11685827-11688432:-|nuORF'] 72647 26262 MLYARKLVDSN True NCI_RA007_Epitope_Rep1 1308.68600668804 1308.68437490379 108.68 3 -1.7998799148324793 0.4443698625614842 1.0 ['ENST00000266517.8_3_12:22841582-22841741:+|nuORF'] 141537 6634 YTMAPAWTWWV True NCI_RA007_Epitope_Rep1 1410.6430792469 1410.64198993586 29.818 2 -1.8002552181697604 0.4443698625614842 1.0 ['NOTCH3|p.T1098Pfs*174|1|0.19|ENSG00000074181|chr19:15180108-15180108|C/-|frameshift_variant'] 31356 8473 GDQRIQVAK True NCI_RA007_Epitope_Rep2 1013.5617921510899 1013.56068993586 37.602 2 -1.8003790583528105 0.4443698625614842 1.0 ['nc|ENSG00000058600|Q9NVU0-3|POLR3E', 'nc|ENSG00000058600|Q9NVU0-2|POLR3E', 'nc|ENSG00000058600|Q9NVU0-5|POLR3E', 'ENST00000564061.5_1_16:22308800-22337695:+|nuORF', 'nc|ENSG00000058600|Q9NVU0-4|POLR3E', 'ENSG00000058600|ENST00000299853|POLR3E'] 32850 24805 GHPASSWQ True H1975_Epitope_Rep1 868.38276515996 868.38166993586 102.73 2 -1.8004745774236797 0.4443698625614842 1.0 ['ENSG00000204308|ENST00000375094|RNF5'] 18561 5652 EKMKEQIRQWF True NCI_RA007_Epitope_Rep2 1521.7762186747698 1521.7745849037901 26.599 3 -1.8006229037004708 0.4443698625614842 1.0 ['ENSG00000278685|ENST00000615129|IQCA1L'] 65251 8626 LQTEGRQL True PC9_epitope_Rep4 943.5086939490698 943.50758993586 40.662 2 -1.8006254269253097 0.4443698625614842 1.0 ['ENST00000562590.5_1_16:28922190-28936514:-|nuORF', 'ENSG00000177548|ENST00000358201|RABEP2'] 92228 22263 RLKAGHGG True PC9_epitope_Rep4 794.4511195032999 794.45002993586 93.875 2 -1.800637445544489 0.4443698625614842 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 114186 15858 TPLEQRKL True PC9_epitope_Rep6 983.57637958607 983.57528993586 73.27 2 -1.8006425227973466 0.4443698625614842 1.0 ['nc|ENSG00000137500|Q9GZT6-2|CCDC90B', 'ENSG00000137500|ENST00000529689|CCDC90B', 'ENST00000529312.5_1_11:82985712-82996176:-|nuORF', 'ENST00000526631.1_1_11:82985654-82997015:-|nuORF'] 28472 14144 FSDQNSTELM True H1975_Epitope_Rep2 1170.4863038219798 1170.4852099358602 59.559 2 -1.8006548083867382 0.4443698625614842 1.0 ['ENSG00000135164|ENST00000331242|DMTF1', 'ENST00000425406.5_1_7:86817376-86824453:+|nuORF', 'ENST00000547146.6_1_7:86813892-86824453:+|nuORF', 'ENST00000447863.5_1_7:86811523-86824453:+|nuORF', 'nc|ENSG00000135164|Q9Y222-5|DMTF1'] 14877 5770 DWLSHYWMPKW True H1975_Epitope_Rep1 1547.7019911053499 1547.70088993586 27.265 2 -1.8006725492163895 0.4443698625614842 1.0 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 59910 7798 LGGLVTTV True PC9_epitope_Rep2 758.4538048419 758.45270993586 35.366 2 -1.8007192198956108 0.4443698625614842 1.0 ['ENST00000528047.5_1_8:145736154-145736544:+|nuORF', 'ENSG00000167700|ENST00000301327|MFSD3'] 13663 6001 DPQDVGLPA True H1975_Epitope_Rep3 910.4396113297399 910.43850993586 28.095 2 -1.8008517954373824 0.4443698625614842 1.0 ['ENST00000014935.7_2_X:153637859-153638210:-|nuORF', 'ENST00000432135.1_2_X:153637859-153640303:-|nuORF'] 136372 23892 WTIFLFLRWVL True PC9_epitope_Rep1 1492.8594777229198 1492.85782490379 96.702 3 -1.8008544660059933 0.4443698625614842 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 48596 1901 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 10.204 3 -1.8008929634119903 0.4443698625614842 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 131796 22065 VTQFDNVR True PC9_epitope_Rep2 977.4930438849299 977.49194993586 90.345 2 -1.8009583574667698 0.4443698625614842 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2'] 86439 20260 QKKKKTGSQ True NCI_RA007_Epitope_Rep2 1031.60874234351 1031.60764993586 83.837 2 -1.8010462552290751 0.4443698625614842 1.0 ['ENST00000529012.1_1_11:111795026-111796920:+|nuORF', 'ENSG00000149300|ENST00000278601|C11orf52', 'ENST00000527286.5_1_11:111789765-111796920:+|nuORF'] 115925 24322 TSGKAVGVAVA True H1975_Epitope_Rep3 958.5447451046198 958.54364993586 101.29 2 -1.8010774484545466 0.4443698625614842 1.0 ['nc|ENSG00000074370|Q93084-4|ATP2A3', 'ENSG00000074370|ENST00000397041|ATP2A3', 'nc|ENSG00000074370|Q93084-3|ATP2A3', 'nc|ENSG00000074370|Q93084-7|ATP2A3', 'nc|ENSG00000074370|Q93084-1|ATP2A3', 'nc|ENSG00000074370|Q93084-6|ATP2A3', 'nc|ENSG00000074370|Q93084-5|ATP2A3'] 61472 25406 LKAKKPQKRKP True H1975_Epitope_Rep3 1320.8717737421198 1320.8701349037901 105.7 3 -1.8011927704452118 0.4443698625614842 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 63180 24233 LLRRRMLGD True NCI_RA007_Epitope_Rep3 1128.6549813432798 1128.6538899358602 104.89 2 -1.8012199030372704 0.4443698625614842 1.0 ['ENST00000478749.5_1_1:12079550-12082221:+|nuORF', 'ENST00000235332.5_1_1:12079550-12081702:+|nuORF'] 29577 25770 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 105.81 3 -1.801230248030234 0.4443698625614842 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 53202 9363 KQEIKRLSTEH True NCI_RA007_Epitope_Rep2 1367.75211210191 1367.75100993586 41.029 2 -1.8012349220561732 0.4443698625614842 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 2784 5086 AETVAAAAPTP True PC9_epitope_Rep5 997.5080252427299 997.50692993586 24.589 2 -1.8012350059181599 0.4443698625614842 1.0 ['ENST00000537063.1_1_12:109915501-109915567:+|nuORF'] 94829 15453 RSRWERQDRRW True H1975_Epitope_Rep3 1629.8348877227697 1629.83378993586 64.854 2 -1.801238510796695 0.4443698625614842 1.0 ['ENST00000541775.5_1_12:7270875-7271013:+|nuORF'] 124434 6693 VGVGIDWA True H1975_Epitope_Rep3 815.4177536863499 815.41664993586 30.699 2 -1.801333152731454 0.44437597658399175 1.0 ['ENST00000460254.1_1_22:47131346-47133979:-|nuORF'] 18394 19306 EITWEKQLEDR True H1975_Epitope_Rep1 1445.7150578868498 1445.7139699358602 80.43 2 -1.8016814758556854 0.4443894280495588 1.0 ['ENSG00000173714|ENST00000311378|WFIKKN2'] 70160 19619 LVPRGWHS True PC9_epitope_Rep3 950.5086343794201 950.50752993586 80.702 2 -1.8016985800320728 0.4443894280495588 1.0 ['ENST00000368086.5_2_1:160064936-160068275:-|nuORF'] 92381 4878 RLPFREVYLHA True PC9_epitope_Rep4 1399.7724536236701 1399.7707949037901 25.356 3 -1.801738134585977 0.4443894280495588 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 9347 13159 AVRTFVSH True H1975_Epitope_Rep3 915.4926499621099 915.49154993586 55.865 2 -1.801810025368604 0.4443894280495588 1.0 ['ENST00000591478.1_1_16:5080487-5083590:-|nuORF', 'nc|ENSG00000103174|Q9UK23-3|NAGPA', 'ENST00000568202.5_1_16:5075546-5083878:-|nuORF', 'nc|ENSG00000103174|Q9UK23-2|NAGPA', 'ENSG00000103174|ENST00000312251|NAGPA'] 43301 23088 IFVFMFPL True H1975_Epitope_Rep1 1012.5455970517598 1012.54448993586 96.007 2 -1.8018137719346963 0.4443955415204164 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 82777 4483 PRMRYGLFYNT True H1975_Epitope_Rep3 1416.6972400780796 1416.6961499358601 22.362 2 -1.801882500028651 0.44441265789357864 1.0 ['ENSG00000163378|ENST00000383701|EOGT'] 104570 18366 SQQRLVQLV True NCI_RA007_Epitope_Rep1 1069.62439240765 1069.6232899358602 75.575 2 -1.8024140185804383 0.4444664488233158 1.0 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 23036 13105 EVGTHNDN True H1975_Epitope_Rep2 884.3624236382 884.36132993586 55.535 2 -1.8025871809042617 0.4444664488233158 1.0 ['nc|ENSG00000152583|Q14515-2|SPARCL1', 'ENSG00000152583|ENST00000282470|SPARCL1'] 112756 12379 TLHLNERQTS True H1975_Epitope_Rep1 1197.61019889549 1197.60910993586 52.649 2 -1.802641592831827 0.4444664488233158 1.0 ['ENST00000307068.4_1_7:16505389-16505443:-|nuORF'] 130568 23150 VSRRAAQL True PC9_epitope_Rep2 899.5300980999898 899.52900993586 94.531 2 -1.8026531817182612 0.4444664488233158 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 38798 16440 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 69.991 2 -1.8026944911648495 0.4444664488233158 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 63397 23365 LLVKARRPSAD True PC9_epitope_Rep1 1224.73025445852 1224.72859490379 94.656 3 -1.802725078691949 0.4444664488233158 1.0 ['ENST00000464929.5_1_7:143936468-143940919:+|nuORF'] 133398 15336 VVVLLSAE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 65.691 2 -1.8027817419390828 0.4444664488233158 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'PIK3AP1|p.H120Ifs*18|1|0.36|ENSG00000155629|chr10:96709639-96709639|G/-|frameshift_variant', 'PIK3AP1|p.N275Mfs*27|1|0.24|ENSG00000155629|chr10:96651542-96651542|G/-|frameshift_variant'] 91195 26849 RGCCGGCC True H1975_Epitope_Rep2 757.21280600785 757.2122549679301 110.75 1 -1.8028178146476928 0.44448356290982705 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8'] 107388 13493 SVLKTKRSS True NCI_RA007_Epitope_Rep5 1004.59784330664 1004.59674993586 58.585 2 -1.802993777601709 0.44450678812682903 1.0 ['ENST00000325870.2_1_9:22451315-22451384:+|nuORF'] 80551 7619 PGPLSKQGS True PC9_epitope_Rep4 869.46068112749 869.45958993586 36.688 2 -1.803045196415392 0.44450678812682903 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 93702 18721 RQVEKRREKKE True NCI_RA007_Epitope_Rep4 1484.8535574786795 1484.85190490379 80.995 3 -1.8031412326691612 0.4445128994994224 1.0 ['ENSG00000261649|ENST00000567390|GOLGA6L7'] 2980 7469 AFGLPAPP True NCI_RA007_Epitope_Rep5 768.41702541036 768.41592993586 35.411 2 -1.8033687325165866 0.4445410139060025 1.0 ['ENST00000522770.1_1_8:86019758-86019872:+|nuORF'] 79774 15232 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 65.272 2 -1.8034221076760781 0.4445422341525666 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 129456 14185 VRHRISHA True NCI_RA007_Epitope_Rep4 974.5522305269 974.55112993586 61.842 2 -1.8034331318444485 0.4445422341525666 1.0 ['ZNF623|p.K298Rfs*89|1|0.23|ENSG00000183309|chr8:143650761-143650761|G/-|frameshift_variant', 'ENSG00000183309|ENST00000526926|ZNF623', 'nc|ENSG00000183309|O75123|ZNF623'] 36668 23452 GVIIYIMKHSL True PC9_epitope_Rep1 1272.72641494804 1272.72587496793 94.992 1 -1.8035379297622358 0.4445434543454345 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 14675 12674 DVGRRRKH True PC9_epitope_Rep4 1022.5845932843399 1022.58348993586 56.595 2 -1.8035430405237125 0.4445434543454345 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 136399 18286 WTRQIKEML True PC9_epitope_Rep5 1203.6434136000698 1203.64177490379 75.352 3 -1.8037235923841022 0.44456056589036425 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'nc|ENSG00000183914|Q9P225-3|DNAH2'] 139474 5621 YLRFWKDVYLY True NCI_RA007_Epitope_Rep2 1564.8078360728798 1564.80619490379 26.478 3 -1.8037431762994751 0.4445691153499219 1.0 ['ENST00000359933.5_1_14:96749930-96750203:-|nuORF'] 117216 9801 TVLLREQLMFI True NCI_RA007_Epitope_Rep1 1361.7740934164497 1361.77298993586 42.126 2 -1.803791782295029 0.4445691153499219 1.0 ['ENST00000368654.7_1_10:129914037-129921160:-|nuORF', 'ENST00000478293.1_1_10:129914037-129924496:-|nuORF'] 117310 7171 TVMSYDRYF True NCI_RA007_Epitope_Rep4 1180.5222954078797 1180.52118993586 34.207 2 -1.803858657443146 0.4445691153499219 1.0 ['OR10G4|p.L123F|1|0.2|ENSG00000254737|chr11:124015943-124015943|G/T|missense_variant'] 55942 19333 LARKREQER True NCI_RA007_Epitope_Rep1 1184.6738022115599 1184.67327496793 79.356 1 -1.8039050507492507 0.4445691153499219 1.0 ['ENSG00000141867|ENST00000679869|BRD4'] 77165 14327 NRQEQTESRER True H1975_Epitope_Rep1 1431.6814663427897 1431.6803699358602 60.298 2 -1.8039339530559029 0.4445691153499219 1.0 ['ENSG00000130943|ENST00000253255|PKDREJ'] 16432 7935 EEKSHIID True H1975_Epitope_Rep3 969.4767251144499 969.4761749679301 35.491 1 -1.8039949373540005 0.44460822598919775 1.0 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 48638 28073 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 118.8 3 -1.8041846579812166 0.44462533550402605 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 13949 16404 DRCERGQVLK True H1975_Epitope_Rep1 1202.6189897573797 1202.6184749679298 68.459 1 -1.8043259779237413 0.4446302081041841 1.0 ['ENST00000537496.5_1_12:109994935-109999279:-|nuORF', 'ENST00000541763.6_1_12:109994935-109999613:-|nuORF', 'ENST00000540016.5_1_12:109994935-110011292:-|nuORF'] 83840 23399 PVLVIVLVVLW True NCI_RA007_Epitope_Rep4 1248.8209669558798 1248.8193149037902 101.57 3 -1.8043485051057149 0.4446302081041841 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15', 'ENST00000482827.1_1_X:74722059-74742841:-|nuORF'] 30978 4756 GASEGPPA True H1975_Epitope_Rep3 684.3078688841999 684.3073249679301 23.42 1 -1.80443215977815 0.4446302081041841 1.0 ['ENSG00000099331|ENST00000682292|MYO9B'] 70922 17491 LYFLGVKEK True H1975_Epitope_Rep3 1095.63283183303 1095.63227496793 73.005 1 -1.8045748653659675 0.4446302081041841 1.0 ['ENST00000372502.5_1_1:43317569-43317752:+|nuORF'] 30039 5934 FYGPGPPA True NCI_RA007_Epitope_Rep5 804.3806399016398 804.37954993586 29.51 2 -1.8046343850912763 0.4446302081041841 1.0 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 133060 26528 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 108.04 2 -1.8047017334407842 0.4446302081041841 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 85489 24878 QFPRALGL True NCI_RA007_Epitope_Rep1 900.5181364339597 900.51702993586 102.97 2 -1.8047213806210112 0.4446302081041841 1.0 ['ENSG00000170190|ENST00000329783|SLC16A5', 'nc|ENSG00000170190|O15375-2|SLC16A5'] 5045 19023 ALKRCKFLY True NCI_RA007_Epitope_Rep1 1140.6477707045199 1140.64717496793 78.137 1 -1.804743750241394 0.4446302081041841 1.0 ['ENST00000301332.2_1_8:145699090-145699315:+|nuORF'] 102146 22457 SLRQQLRER True PC9_epitope_Rep4 1184.6738022115599 1184.6727099358602 94.613 2 -1.804755336850507 0.4446326440827101 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 61408 11773 LITRGIVYDVT True H1975_Epitope_Rep1 1248.70778767844 1248.7066899358601 50.277 2 -1.8047955046486581 0.4446326440827101 1.0 ['ENST00000593607.1_1_19:54120057-54120405:+|nuORF'] 95209 24635 RVKKVVLVLLL True H1975_Epitope_Rep1 1278.9115132957797 1278.9104099358601 102.07 2 -1.8048096473709976 0.4446326440827101 1.0 ['ENSG00000212127|ENST00000537503|TAS2R14'] 81192 18548 PKGPEVKLPK True NCI_RA007_Epitope_Rep5 1091.6702799709099 1091.66918993586 78.17 2 -1.8048712763381423 0.4446326440827101 1.0 ['nc|ENSG00000105227|Q9BXM0-3|PRX', 'ENST00000291825.11_2_19:40899875-40904000:-|nuORF', 'ENSG00000105227|ENST00000324001|PRX'] 38791 22278 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 92.069 2 -1.80536819510408 0.44464973056197077 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 55839 8310 LAPMLKVM True NCI_RA007_Epitope_Rep2 901.51291702449 901.51180993586 36.963 2 -1.8054010338334816 0.44464973056197077 1.0 ['ENSG00000165591|ENST00000374900|FAAH2'] 132630 16328 VVFLIVPM True PC9_epitope_Rep4 916.54559705176 916.54448993586 70.768 2 -1.8055641187115559 0.44464973056197077 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 14 8636 AAAAAAGF True NCI_RA007_Epitope_Rep2 648.3231250255201 648.3225749679301 38.237 1 -1.8055721052682048 0.44464973056197077 1.0 ['ENSG00000253352|ENST00000644773|TUG1', 'ENSG00000133124|ENST00000372129|IRS4', 'nc|ENSG00000133124|O14654|IRS4'] 18718 22668 ELANTAKA True PC9_epitope_Rep3 816.4341320264799 816.4335849679301 92.464 1 -1.8056223843603145 0.44464973056197077 1.0 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF'] 76014 14902 NLWWEKRQHYR True PC9_epitope_Rep5 1614.81677804714 1614.81568993586 62.324 2 -1.8057295684838097 0.44464973056197077 1.0 ['ENST00000411999.1_1_2:197893450-197893558:-|nuORF'] 101198 11634 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 51.401 2 -1.805756359334293 0.44464973056197077 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 86412 9783 QKIHSTPFWGP True NCI_RA007_Epitope_Rep2 1296.6615061923599 1296.6604099358601 42.675 2 -1.8058383817300074 0.44464973056197077 1.0 ['ENST00000379310.7_2_13:42141480-42141777:-|nuORF'] 44626 9902 ILRNDSTV True PC9_epitope_Rep5 916.4977949122 916.49668993586 43.058 2 -1.8058978842221953 0.44464973056197077 1.0 ['nc|ENSG00000110218|Q96RD7-2|PANX1', 'ENSG00000110218|ENST00000227638|PANX1'] 33346 22311 GKSKRKVN True PC9_epitope_Rep3 915.5613982282699 915.56030993586 91.105 2 -1.8059117101101652 0.44464973056197077 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 64399 23378 LPLSLLKTA True PC9_epitope_Rep6 954.61136811246 954.61026993586 103.03 2 -1.8061416819382345 0.4446741592803572 1.0 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 43531 13392 IGPIQQII True PC9_epitope_Rep5 880.5382031721999 880.53710993586 56.529 2 -1.8061538893916997 0.4446741592803572 1.0 ['ENST00000367833.6_1_1:168154054-168154114:+|nuORF'] 5715 10759 APALRPLGA True PC9_epitope_Rep3 864.5181364339599 864.51702993586 46.34 2 -1.8061593997224856 0.4446741592803572 1.0 ['nc|ENSG00000221949|Q8N7H1|LINC01465'] 109112 5210 TALLVIIIII True PC9_epitope_Rep1 1080.75221868972 1080.75112993586 24.89 2 -1.8061620583434297 0.4446741592803572 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 127889 6117 VPGKKAPA True NCI_RA007_Epitope_Rep2 766.4701236123799 766.46902993586 28.399 2 -1.8063427549420232 0.44469736957860473 1.0 ['JARID2|p.G469V|1|0.14|ENSG00000008083|chr6:15496631-15496631|G/T|missense_variant'] 35515 25360 GSQLRLPP True PC9_epitope_Rep2 866.4974009893799 866.49630993586 103.23 2 -1.8063622746396601 0.44469736957860473 1.0 ['ENST00000608809.1_1_21:30396989-30397052:-|nuORF'] 54603 8854 KYKSSLLNRY True H1975_Epitope_Rep1 1270.70337100434 1270.7022699358602 38.98 2 -1.8065699910226645 0.44471447265689434 1.0 ['ENSG00000150051|ENST00000419761|MKX'] 36216 8367 GVCRIGKV True NCI_RA007_Epitope_Rep4 830.4796427502598 830.47854993586 38.999 2 -1.806677261871625 0.44473157535903585 1.0 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'ENST00000590181.5_1_17:33310024-33316690:+|nuORF'] 50101 24901 KKKDHLISGLL True PC9_epitope_Rep1 1250.7710566413398 1250.7704749679299 100.69 1 -1.8067261942578534 0.4447327908511106 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 106093 14115 STCVLEFEM True PC9_epitope_Rep3 1057.4460192331298 1057.44492993586 59.378 2 -1.8068276018841105 0.4447327908511106 1.0 ['PCDHGB3|p.A257Lfs*6|1|0.19|ENSG00000262209|chr5:141371160-141371160|C/-|frameshift_variant', 'PCDHGB3|p.I394Sfs*12|1|0.22|ENSG00000262209|chr5:141371571-141371571|A/-|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 110747 17192 TGGGGGGD True PC9_epitope_Rep1 576.21396849936 576.2134249679301 70.949 1 -1.8068992684014653 0.4447388966472768 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 69870 23424 LVHYTAQPLFL True PC9_epitope_Rep4 1300.71795843932 1300.7168699358601 98.387 2 -1.8069555821540493 0.444766994348046 1.0 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'ENST00000527328.5_1_8:145537548-145537990:+|nuORF'] 126719 11330 VLPGHLEN True PC9_epitope_Rep3 877.4657665079301 877.46466993586 48.586 2 -1.8070611782565857 0.44477552860457187 1.0 ['ENST00000585033.1_1_18:641361-657928:-|nuORF'] 105406 7491 SRSNDTLYIP True PC9_epitope_Rep2 1164.57750178488 1164.57640993586 34.185 2 -1.807106553245424 0.44477552860457187 1.0 ['ENSG00000143387|ENST00000271651|CTSK'] 112627 7873 TLFAPLNFVME True PC9_epitope_Rep5 1280.6474959209997 1280.64586490379 35.226 3 -1.8071336085036611 0.44477552860457187 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7'] 28242 18649 FRKKKREQ True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.6661699358601 80.67 2 -1.8071484122724193 0.44477552860457187 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 123425 19652 VGNGKGAA True PC9_epitope_Rep2 672.3554877829599 672.35493496793 80.977 1 -1.8071517224400184 0.44477552860457187 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 117136 14472 TVKQRKQYRR True NCI_RA007_Epitope_Rep2 1361.8003997070098 1361.79930993586 60.955 2 -1.8076503459384876 0.44481094215566624 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 122179 5401 VGAKGARAP True PC9_epitope_Rep2 825.48208527841 825.48098993586 26.17 2 -1.8076985547678905 0.44481094215566624 1.0 ['nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22', 'ENSG00000128805|ENST00000249601|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22'] 91236 11467 RGGGGGAK True NCI_RA007_Epitope_Rep1 658.35107110886 658.35052496793 48.57 1 -1.8077185508298255 0.44481094215566624 1.0 ['NOL4|p.E69K|1|0.22|ENSG00000101746|chr18:34223049-34223049|C/T|missense_variant', 'NOL4|p.K133Rfs*19|1|0.21|ENSG00000101746|chr18:34129887-34129887|T/-|frameshift_variant', 'nc|ENSG00000101746|O94818-2|NOL4', 'ENSG00000101746|ENST00000261592|NOL4'] 99022 14579 SHECGWCG True NCI_RA007_Epitope_Rep5 877.2847079948099 877.28415496793 62.748 1 -1.8077334971902705 0.44481094215566624 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.G1527Wfs*20|1|0.85|ENSG00000105429|chr19:42356406-42356407|-/T|frameshift_variant'] 70705 24383 LWPFIMLRTRT True PC9_epitope_Rep2 1432.8013112237998 1432.79965490379 99.355 3 -1.807836346362999 0.4448280411645703 1.0 ['ENST00000335025.12_1_22:22051218-22051356:+|nuORF'] 8671 15055 AVAGENARVI True PC9_epitope_Rep3 998.5508931142199 998.54978993586 63.039 2 -1.8079037909365563 0.4448451397974778 1.0 ['ENSG00000184672|ENST00000521268|RALYL', 'nc|ENSG00000184672|Q86SE5-3|RALYL'] 17229 9337 EHADDTQP True H1975_Epitope_Rep2 911.3620892850299 911.36098993586 40.875 2 -1.8080712297625674 0.44485734703974494 1.0 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF'] 30501 13301 GAGGAGAP True PC9_epitope_Rep1 556.2605247689601 556.25997496793 56.026 1 -1.808150701510714 0.44485734703974494 1.0 ['ENSG00000066583|ENST00000173527|ISOC1', 'ISOC1|p.A234Cfs*2|1|0.33|ENSG00000066583|chr5:129107009-129107010|-/T|frameshift_variant'] 14674 9280 DVGRRRKH True NCI_RA007_Epitope_Rep5 1022.5845932843399 1022.58348993586 42.341 2 -1.8081795068179944 0.4448585595391229 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 64236 9261 LPGVLHGT True PC9_epitope_Rep6 792.4493881678001 792.44828993586 45.774 2 -1.8081803067849054 0.4448585595391229 1.0 ['RNF31|p.Q263H|1|0.26|ENSG00000092098|chr14:24149563-24149563|G/C|missense_variant'] 82156 21028 PNLEDIYTSLC True H1975_Epitope_Rep2 1266.5802042068199 1266.57856490379 87.037 3 -1.8083333784638262 0.4448707659494937 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 45670 19996 IRKEQEVQRSK True NCI_RA007_Epitope_Rep5 1399.78956023979 1399.78792490379 83.831 3 -1.808379584184442 0.4448707659494937 1.0 ['nc|ENSG00000158423|Q8N443-3|RIBC1', 'ENSG00000158423|ENST00000375327|RIBC1'] 112937 20056 TLLKGRGV True PC9_epitope_Rep1 842.5337864980999 842.53268993586 81.972 2 -1.8084268467837912 0.4448731901982125 1.0 ['ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF', 'ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'PTPN6|p.I199Lfs*20|1|0.2|ENSG00000111679|chr12:6955225-6955225|G/-|frameshift_variant'] 53478 24856 KRHLCRTR True PC9_epitope_Rep2 1068.6086998571998 1068.6076099358602 101.29 2 -1.808453741192868 0.4448731901982125 1.0 ['ENST00000591270.1_1_17:49270805-49337516:-|nuORF', 'nc|ENSG00000011258|Q05BQ5-3|MBTD1', 'ENSG00000011258|ENST00000586178|MBTD1'] 117014 13895 TVHPEGVPP True PC9_epitope_Rep3 931.4763311916298 931.4752299358599 58.526 2 -1.808503487683098 0.4448731901982125 1.0 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 72352 11711 MIRGCGGG True PC9_epitope_Rep6 749.3312642644099 749.33016993586 56.192 2 -1.8085317771678608 0.4448731901982125 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 124179 4610 VGSVEDQR True NCI_RA007_Epitope_Rep3 888.4301092751998 888.42900993586 25.048 2 -1.808692226178719 0.4449403616775683 1.0 ['ENSG00000214456|ENST00000381848|PLIN5'] 70161 19525 LVPRGWHS True PC9_epitope_Rep5 950.5086343794201 950.50752993586 80.155 2 -1.8086965099125312 0.4449403616775683 1.0 ['ENST00000368086.5_2_1:160064936-160068275:-|nuORF'] 10317 22794 CDSSTRIK True NCI_RA007_Epitope_Rep4 908.43856578392 908.43746993586 98.958 2 -1.808786892830982 0.44495256521595744 1.0 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 15780 9479 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.69147496793 40.866 1 -1.80882291505779 0.44495256521595744 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 141052 20396 YSLYICPEN True PC9_epitope_Rep2 1100.4848472699998 1100.48374993586 83.879 2 -1.809101530938309 0.4449806525371559 1.0 ['ENST00000370025.8_1_1:109242753-109242981:+|nuORF'] 33964 3145 GLSPYERK True NCI_RA007_Epitope_Rep2 948.5028802926399 948.50178993586 16.87 2 -1.8093065003396986 0.4449928547872925 1.0 ['ENSG00000092470|ENST00000263795|WDR76'] 136212 7371 WRSCGWLVASP True H1975_Epitope_Rep2 1260.6073624445198 1260.60677496793 33.292 1 -1.8093250355188493 0.4449928547872925 1.0 ['ENST00000372483.8_1_9:132388465-132394960:+|nuORF'] 40700 19112 HRRYLALSLP True NCI_RA007_Epitope_Rep5 1224.7091250911199 1224.7080299358602 80.385 2 -1.8093967431207647 0.4449989557111607 1.0 ['ENST00000360222.8_1_19:14857708-14876689:-|nuORF'] 27117 24919 FLIIHPTA True NCI_RA007_Epitope_Rep1 910.5276384885001 910.52654993586 103.13 2 -1.8096356304215282 0.4450270412874291 1.0 ['ENSG00000130226|ENST00000377770|DPP6', 'nc|ENSG00000130226|P42658-2|DPP6', 'ENST00000480367.1_1_7:154677243-154681360:+|nuORF'] 121156 14623 VESAYEREKH True NCI_RA007_Epitope_Rep1 1246.5942144781798 1246.5931099358602 60.931 2 -1.8098199841443978 0.4450392419812254 1.0 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'nc|ENSG00000164989|Q6TFL3-3|CCDC171'] 123647 5745 VGQKMEFYS True PC9_epitope_Rep3 1087.50083168731 1087.4997299358602 27.17 2 -1.8098748709741592 0.4450392419812254 1.0 ['ENST00000379933.7_1_6:7176934-7182129:+|nuORF'] 122274 10342 VGATGSGQ True NCI_RA007_Epitope_Rep2 675.31876792107 675.3182149679301 44.818 1 -1.8101481381323152 0.4450673261885133 1.0 ['ENST00000418880.1_1_3:38169275-38173454:-|nuORF', 'ENST00000411549.5_1_3:38167983-38173454:-|nuORF'] 136521 4235 WWAPRHTP True PC9_epitope_Rep2 1049.51953341629 1049.51842993586 21.617 2 -1.810717544012915 0.44513321023476654 1.0 ['ENST00000479481.5_1_10:99116853-99131081:-|nuORF'] 40143 21087 HQAPGKGL True H1975_Epitope_Rep2 806.43988611326 806.43878993586 87.287 2 -1.8107588313959924 0.44513321023476654 1.0 ['nc|ENSG00000211957|A0A0C4DH35|IGHV3-35'] 30732 21077 GALKAQTWKH True PC9_epitope_Rep3 1138.62472676082 1138.6236299358602 86.354 2 -1.8108086403087527 0.44513321023476654 1.0 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 24932 20752 FCLSVHPV True NCI_RA007_Epitope_Rep3 900.45275929608 900.45166993586 90.381 2 -1.8109026604017129 0.44513321023476654 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 99183 23069 SHKRIMLFTN True H1975_Epitope_Rep3 1245.6652116738098 1245.66355490379 96.341 3 -1.8110393842585848 0.44513321023476654 1.0 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'XRCC6|p.P429Sfs*35|1|0.07|ENSG00000196419|chr22:41653683-41653684|-/AG|frameshift_variant'] 45358 10558 IQDLLELSPPE True H1975_Epitope_Rep1 1252.6550833992399 1252.6539899358602 45.563 2 -1.8110751086399177 0.44513321023476654 1.0 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 81219 25418 PKGTTILTSLT True PC9_epitope_Rep5 1130.65468947642 1130.65358993586 103.0 2 -1.8110843357528565 0.44513321023476654 1.0 ['ENSG00000165841|ENST00000371321|CYP2C19'] 71628 21415 MDPGCLVC True H1975_Epitope_Rep1 836.32306764948 836.32196993586 88.974 2 -1.811101643496122 0.44513321023476654 1.0 ['ENST00000600659.2_1_19:8387846-8388053:+|nuORF'] 133042 21543 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 89.126 2 -1.8111268080316452 0.44513321023476654 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 142932 18492 YYYRDRDWRWV True NCI_RA007_Epitope_Rep1 1676.7848092125198 1676.78370993586 76.069 2 -1.811287908244928 0.4451344162838239 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 47231 9165 IVATTTVV True PC9_epitope_Rep2 802.48001958974 802.47892993586 40.591 2 -1.811394039203915 0.4451344162838239 1.0 ['ENSG00000113262|ENST00000517717|GRM6'] 124447 9540 VGVHINIT True NCI_RA007_Epitope_Rep1 851.48650195251 851.48540993586 41.106 2 -1.8114142606852306 0.4451405145790058 1.0 ['ENSG00000174469|ENST00000361727|CNTNAP2', 'CNTNAP2|p.T440N|1|0.2|ENSG00000174469|chr7:147132480-147132480|C/A|missense_variant', 'CNTNAP2|p.G452Wfs*4|1|0.11|ENSG00000174469|chr7:147300144-147300145|-/T|frameshift_variant'] 119969 24285 VDPETGDL True H1975_Epitope_Rep2 844.3814277472799 844.38032993586 99.937 2 -1.8115684983562839 0.44514661274014156 1.0 ['ENSG00000005421|ENST00000222381|PON1'] 39579 22389 HLIEHLKRHFR True PC9_epitope_Rep4 1484.8476842526 1484.84658993586 94.353 2 -1.811958703074169 0.4451637011067272 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 61331 6373 LIRSHNLEVP True H1975_Epitope_Rep1 1176.66150619236 1176.6604099358601 29.575 2 -1.8122242249441054 0.4451819940214524 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 124234 8379 VGTGFGSK True PC9_epitope_Rep1 751.38645355807 751.3859049679301 37.065 1 -1.81236536858018 0.4451819940214524 1.0 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF'] 80545 7950 PGPLSKQGS True PC9_epitope_Rep2 869.46068112749 869.46013496793 35.944 1 -1.8124116000930686 0.4451819940214524 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 98764 6666 SGHRCAAG True NCI_RA007_Epitope_Rep1 757.3289557652898 757.32784993586 29.94 2 -1.8125089431233994 0.4451880913916455 1.0 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 130405 13156 VSLNNREI True PC9_epitope_Rep3 943.50869394907 943.50758993586 55.634 2 -1.8125321324131505 0.4451953932040969 1.0 ['ENST00000419769.6_1_10:127452041-127452143:+|nuORF'] 139774 26206 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 106.55 3 -1.8125871546040837 0.4451953932040969 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'SDAD1|p.A378Qfs*14|1|0.07|ENSG00000198301|chr4:75964184-75964184|C/-|frameshift_variant', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 42147 14830 IDPADTRLV True PC9_epitope_Rep6 998.53965972418 998.53856993586 69.018 2 -1.8126112733952773 0.4451953932040969 1.0 ['nc|ENSG00000131844|Q9HCC0-2|MCCC2', 'ENSG00000131844|ENST00000340941|MCCC2'] 87496 5784 QQEYLDTYYNL True NCI_RA007_Epitope_Rep1 1448.6459752675198 1448.64486993586 26.552 2 -1.8127026168890228 0.4452075869799336 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 78972 19612 PAILLMFL True PC9_epitope_Rep4 916.54559705176 916.54448993586 83.556 2 -1.8127207897423052 0.4452075869799336 1.0 ['ENSG00000149488|ENST00000358864|TMC2'] 139816 23673 YPLIITIIM True PC9_epitope_Rep2 1075.63514033215 1075.63404993586 96.533 2 -1.812786283029623 0.4452246727986022 1.0 ['nc|ENSG00000154265|Q8WWZ7-2|ABCA5', 'ENSG00000154265|ENST00000392676|ABCA5'] 126096 24214 VLENRDHYG True PC9_epitope_Rep5 1101.52032126193 1101.5197749679298 98.143 1 -1.8130617904219115 0.445231972923672 1.0 ['ENST00000521189.1_1_8:62212560-62289213:+|nuORF', 'nc|ENSG00000177182|Q8IUQ0-2|CLVS1', 'ENSG00000177182|ENST00000325897|CLVS1'] 32364 20476 GFHMFIPP True NCI_RA007_Epitope_Rep3 944.4578446765199 944.45674993586 89.205 2 -1.813071247789619 0.445231972923672 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1', 'nc|ENSG00000085382|Q8IYU2-2|HACE1', 'nc|ENSG00000085382|Q8IYU2-3|HACE1'] 72188 23329 MGRLPQDL True NCI_RA007_Epitope_Rep5 928.4800366730799 928.47892993586 97.022 2 -1.813095209146898 0.445231972923672 1.0 ['ENST00000452089.5_3_7:99950889-99956429:+|nuORF'] 19908 9181 ELTTDYDEK True H1975_Epitope_Rep2 1112.4873493677999 1112.48624993586 40.269 2 -1.8131312406890643 0.4452380690746459 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 54 14455 AAAGMKVCQ True PC9_epitope_Rep2 877.41499388837 877.41388993586 60.871 2 -1.8132443330818366 0.44524416509164433 1.0 ['nc|ENSG00000155792|Q8TB45-2|DEPTOR', 'ENSG00000155792|ENST00000286234|DEPTOR', 'DEPTOR|p.P360L|1|0.45|ENSG00000155792|chr8:120009111-120009111|C/T|missense_variant'] 41580 19829 IAADWMTDLK True PC9_epitope_Rep5 1162.5692456003 1162.5681499358602 81.318 2 -1.8133664889145904 0.4452453684372459 1.0 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3', 'CLCN3|p.A194Qfs*3|1|0.16|ENSG00000109572|chr4:169689202-169689202|G/-|frameshift_variant'] 136365 26739 WTHGAQGG True H1975_Epitope_Rep3 812.3565504121198 812.35544993586 111.72 2 -1.8133837428466968 0.4452453684372459 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 135497 17433 WIPPCPIIKK True H1975_Epitope_Rep2 1193.69947192421 1193.69836993586 72.347 2 -1.8134628217402669 0.4452514641730856 1.0 ['ENST00000215770.5_1_22:24313714-24313753:+|nuORF'] 24350 13093 EYWLGLEPVYQ True H1975_Epitope_Rep1 1395.6710678165498 1395.66996993586 55.451 2 -1.8138528374141014 0.4452685478199719 1.0 ['ENSG00000130812|ENST00000253109|ANGPTL6'] 63324 21195 LLTARRKDAKS True H1975_Epitope_Rep2 1257.7517181790897 1257.7500749037902 87.722 3 -1.81395099114412 0.44528194084296574 1.0 ['ENSG00000172809|ENST00000311111|RPL38'] 80557 6004 PGPPGHGA True NCI_RA007_Epitope_Rep4 688.32927303512 688.32872496793 29.713 1 -1.8139799535688517 0.44528194084296574 1.0 ['ENST00000459985.1_1_9:139702417-139703723:+|nuORF'] 127363 14721 VMVKVLDSPG True H1975_Epitope_Rep1 1043.5685173243098 1043.56797496793 61.845 1 -1.814059152002456 0.44528194084296574 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 68144 10178 LTDQFTITMW True H1975_Epitope_Rep3 1254.59546034814 1254.5943699358602 44.194 2 -1.814061641396802 0.44528194084296574 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant'] 138208 21507 YGRRLVMSIR True PC9_epitope_Rep4 1249.70774519213 1249.7071749679299 90.908 1 -1.8145319764765628 0.4453429729818817 1.0 ['ENSG00000132383|ENST00000254719|RPA1'] 81242 24653 PKKGGAPA True H1975_Epitope_Rep2 724.4231734199599 724.42262496793 101.39 1 -1.8146381447082274 0.4453685494237467 1.0 ['nc|ENSG00000163431|P29536-2|LMOD1', 'ENSG00000163431|ENST00000367288|LMOD1'] 94210 22370 RRPRAPRRMRR True H1975_Epitope_Rep2 1506.9014682442996 1506.8998349037902 92.45 3 -1.814737554725513 0.4453685494237467 1.0 ['ENST00000305850.9_1_16:81040477-81040603:+|nuORF'] 110487 7510 TFGGLGSL True PC9_epitope_Rep1 750.39120458534 750.39010993586 33.706 2 -1.8147600370190073 0.4453685494237467 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 42175 10084 IDQKHREI True PC9_epitope_Rep3 1037.5617921510898 1037.5606899358602 43.742 2 -1.814769282118605 0.4453685494237467 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9', 'SAMD9|p.T529Hfs*5|1|0.05|ENSG00000205413|chr7:93104516-93104516|G/-|frameshift_variant'] 58125 12499 LEKLLPRIWEN True NCI_RA007_Epitope_Rep1 1409.80308504561 1409.80198993586 52.597 2 -1.814826563482249 0.4453685494237467 1.0 ['ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 46069 6846 ISGSLEALMEH True H1975_Epitope_Rep3 1185.56997387629 1185.5688699358602 31.291 2 -1.8148366471043067 0.4453685494237467 1.0 ['ENSG00000198915|ENST00000395810|RASGEF1A', 'nc|ENSG00000198915|Q8N9B8-2|RASGEF1A'] 137364 21761 YDRETYPF True PC9_epitope_Rep1 1089.4767251144497 1089.47562993586 88.537 2 -1.8150392491801859 0.44536974983794947 1.0 ['SMCHD1|p.P440_D441insFSNI|1|0.1|ENSG00000101596|chr18:2698019-2698020|-/TTTTCAAACATA|inframe_insertion'] 72348 13971 MIRGCGGG True PC9_epitope_Rep1 749.3312642644099 749.33016993586 58.577 2 -1.8150766744251814 0.44536974983794947 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 59170 22621 LFALNPQS True NCI_RA007_Epitope_Rep3 888.4705175352001 888.46942993586 98.339 2 -1.815263829443702 0.4453978159126365 1.0 ['PCDHGA5|p.R80Q|2|0.1|ENSG00000253485|chr5:141364569-141364569|G/A|missense_variant'] 72162 15270 MGAHLVVF True NCI_RA007_Epitope_Rep3 872.45784467652 872.45674993586 67.612 2 -1.8153256231518657 0.4454002153230945 1.0 ['nc|ENSG00000205846|Q6EIG7-2|CLEC6A', 'ENSG00000205846|ENST00000382073|CLEC6A'] 97181 9534 SDVERLER True H1975_Epitope_Rep1 1002.5094222250599 1002.50832993586 41.595 2 -1.815374668536031 0.4454002153230945 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000494465.5_1_2:242611409-242611676:+|nuORF', 'ENST00000475693.1_1_2:242607884-242611676:+|nuORF'] 27662 7548 FPGARAVA True PC9_epitope_Rep3 787.4340724568299 787.43296993586 34.032 2 -1.8153904352061685 0.4454002153230945 1.0 ['ENST00000602529.1_1_1:228463365-228463719:-|nuORF'] 10646 5744 CPKLQLWEWRN True PC9_epitope_Rep5 1471.7394392432298 1471.73779490379 27.087 3 -1.8154609183449437 0.4454002153230945 1.0 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 53723 23494 KSKVTLSS True H1975_Epitope_Rep2 848.49673228304 848.49562993586 96.85 2 -1.8157192412698926 0.44542458530154894 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 122904 8854 VGHPLLKTR True PC9_epitope_Rep2 1019.62399848483 1019.62290993586 39.409 2 -1.8157194063441096 0.44542458530154894 1.0 ['ENST00000556440.6_2_17:62517606-62518834:+|nuORF'] 82776 4608 PRMRYGLFYNT True H1975_Epitope_Rep2 1416.6972400780796 1416.6961499358601 22.828 2 -1.8157296411985908 0.44542458530154894 1.0 ['ENSG00000163378|ENST00000383701|EOGT'] 45592 4683 IQVLDVNDNP True H1975_Epitope_Rep3 1125.5666027480102 1125.56550993586 23.136 2 -1.8157470869396954 0.44542458530154894 1.0 ['ENSG00000197410|ENST00000357232|DCHS2'] 84296 21488 PYRLRRLRR True PC9_epitope_Rep6 1284.8003401373599 1284.7992499358602 95.527 2 -1.815771798130905 0.4454256873276875 1.0 ['nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 59148 2737 LEYYQIYH True H1975_Epitope_Rep2 1127.52876068731 1127.52712490379 14.585 3 -1.815961482640012 0.4454256873276875 1.0 ['OTOF|p.R1080H|1|0.46|ENSG00000115155|chr2:26474562-26474562|C/T|missense_variant'] 519 13626 AAPGGGGH True NCI_RA007_Epitope_Rep3 622.2823228427001 622.28177496793 60.9 1 -1.8160139092294376 0.4454256873276875 1.0 ['nc|ENSG00000107951|Q9NVV4-2|MTPAP', 'ENST00000488290.5_1_10:30602540-30654262:-|nuORF'] 48568 2209 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 11.432 3 -1.8161520301457528 0.4454256873276875 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 2015 5596 AEIYPIMDKS True H1975_Epitope_Rep2 1165.5689112471298 1165.5678099358602 26.527 2 -1.816179109206918 0.4454256873276875 1.0 ['CASP1|p.E241Kfs*25|1|0.08|ENSG00000137752|chr11:105029806-105029806|C/-|frameshift_variant', 'nc|ENSG00000137752|P29466-2|CASP1', 'ENSG00000137752|ENST00000533400|CASP1', 'nc|ENSG00000137752|P29466-4|CASP1', 'nc|ENSG00000137752|P29466-3|CASP1'] 70690 25421 LWLKLGSG True PC9_epitope_Rep2 872.51198842436 872.5114349679301 103.46 1 -1.8162114968497896 0.4454256873276875 1.0 ['ENST00000560329.1_1_15:73192182-73192437:-|nuORF'] 126324 13363 VLIHSSRAL True PC9_epitope_Rep2 994.59236400338 994.5912699358599 56.676 2 -1.8162347389401694 0.4454256873276875 1.0 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11'] 115422 14934 TRLPPPIDPR True PC9_epitope_Rep5 1160.6665915727997 1160.66548993586 62.448 2 -1.8162765429171215 0.4454256873276875 1.0 ['ENST00000372906.2_1_20:43104570-43108633:+|nuORF'] 126679 8580 VLPAVDGSI True PC9_epitope_Rep6 869.4858332461699 869.48472993586 42.792 2 -1.8163595842745475 0.4454256873276875 1.0 ['nc|ENSG00000181830|Q96A29-2|SLC35C1', 'ENSG00000181830|ENST00000314134|SLC35C1'] 92459 24763 RLRRRSVRPGV True NCI_RA007_Epitope_Rep5 1350.8432675785 1350.84216993586 102.74 2 -1.8163598053475198 0.4454256873276875 1.0 ['ENSG00000164236|ENST00000296657|ANKRD33B'] 10075 10893 AYTASSHAV True PC9_epitope_Rep5 905.42429561877 905.42318993586 46.888 2 -1.816377609856612 0.4454256873276875 1.0 ['ENST00000469076.5_1_1:19638824-19651237:+|nuORF'] 25642 24599 FEPSRLLLRK True PC9_epitope_Rep1 1257.7557409303697 1257.75409490379 99.485 3 -1.8164371413478504 0.44542688619663234 1.0 ['ENST00000320316.7_1_17:7139851-7140732:-|nuORF'] 15175 16108 EAARRRRPER True NCI_RA007_Epitope_Rep2 1295.7282973959097 1295.7272099358602 67.381 2 -1.816482828766599 0.44542688619663234 1.0 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4'] 61020 7489 LIESAAAF True H1975_Epitope_Rep3 820.4330693973199 820.43196993586 33.787 2 -1.8165297109745953 0.4454329774614472 1.0 ['nc|ENSG00000164188|Q86VV4-2|RANBP3L', 'ENSG00000164188|ENST00000296604|RANBP3L', 'nc|ENSG00000164188|Q86VV4-3|RANBP3L'] 86644 21804 QLGGGARM True NCI_RA007_Epitope_Rep5 788.39630704912 788.39520993586 90.997 2 -1.8166268686016165 0.4454414655844655 1.0 ['ENST00000587551.1_1_19:55791573-55791726:-|nuORF'] 128697 22998 VPVVLNNPY True H1975_Epitope_Rep3 1013.5545815123298 1013.55348993586 96.067 2 -1.8167502243960754 0.4454414655844655 1.0 ['NOS1|p.S891Lfs*34|1|0.07|ENSG00000089250|chr12:117247501-117247502|-/A|frameshift_variant', 'nc|ENSG00000089250|P29475-2|NOS1', 'ENSG00000089250|ENST00000317775|NOS1', 'nc|ENSG00000089250|P29475-5|NOS1', 'nc|ENSG00000089250|P29475-4|NOS1'] 18254 19682 EIQERLKRKL True NCI_RA007_Epitope_Rep4 1311.7986683715096 1311.79756993586 85.054 2 -1.8167676006168694 0.4454414655844655 1.0 ['TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant'] 43513 22932 IGMKGIGW True PC9_epitope_Rep2 860.4578446765199 860.45674993586 93.713 2 -1.8168739976675372 0.4454414655844655 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 92147 21161 RLEHEKRRKEI True H1975_Epitope_Rep2 1492.85864285912 1492.8569849037901 87.591 3 -1.8169216823972545 0.4454414655844655 1.0 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 61473 25958 LKAKKPQKRKP True PC9_epitope_Rep3 1320.8717737421198 1320.8701349037901 105.65 3 -1.817365465161084 0.4454438623658748 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 41099 12706 HTSDRPSNPP True NCI_RA007_Epitope_Rep5 1106.51048485422 1106.50938993586 55.537 2 -1.8174553298971534 0.4454438623658748 1.0 ['ENST00000492538.1_1_22:23412760-23437660:+|nuORF'] 142929 17836 YYYRDRDWRWV True H1975_Epitope_Rep1 1676.7848092125198 1676.78370993586 74.277 2 -1.8175319230776756 0.4454438623658748 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'APOBEC3D|p.A155Pfs*3|1|0.18|ENSG00000243811|chr22:39025319-39025319|G/-|frameshift_variant'] 122901 14963 VGHPGGGH True NCI_RA007_Epitope_Rep3 716.3354210447201 716.3348749679301 66.299 1 -1.8175395330073036 0.4454438623658748 1.0 ['ENST00000397354.7_1_X:39930233-39930314:-|nuORF'] 116025 17075 TSLRVGRK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 72.448 2 -1.817702288996266 0.4454938827508951 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 131226 17035 VTESPLHPS True NCI_RA007_Epitope_Rep3 965.4818104948899 965.4812649679301 74.871 1 -1.8178436124886865 0.44551095491735765 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S10647Gfs*5|1|0.06|ENSG00000181143|chr19:8939016-8939017|-/ATTCC|frameshift_variant', 'MUC16|p.I9333Nfs*20|1|0.84|ENSG00000181143|chr19:8948772-8948773|-/T|frameshift_variant', 'MUC16|p.S7567Pfs*35|1|0.44|ENSG00000181143|chr19:8954072-8954072|C/-|frameshift_variant', 'MUC16|p.A6557Hfs*36|1|0.39|ENSG00000181143|chr19:8957101-8957101|C/-|frameshift_variant', 'MUC16|p.D5542Tfs*6|1|0.11|ENSG00000181143|chr19:8960147-8960147|G/-|frameshift_variant', 'MUC16|p.Q4999Pfs*38|1|0.34|ENSG00000181143|chr19:8961774-8961775|-/G|frameshift_variant', 'MUC16|p.V5155Lfs*34|1|0.09|ENSG00000181143|chr19:8961307-8961307|C/-|frameshift_variant', 'MUC16|p.W2883Lfs*11|1|0.24|ENSG00000181143|chr19:8972491-8972492|-/A|frameshift_variant', 'MUC16|p.T2979Lfs*26|1|0.59|ENSG00000181143|chr19:8972205-8972205|G/-|frameshift_variant', 'MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 38554 24939 HETGHVLG True PC9_epitope_Rep2 848.41406528824 848.41296993586 101.6 2 -1.8181479242680325 0.4455390089615182 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 82757 19269 PRLFPLAWT True NCI_RA007_Epitope_Rep4 1099.61785047523 1099.61727496793 83.318 1 -1.8183223666396735 0.44554140127388536 1.0 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155106165-155106540:+|nuORF'] 48633 26392 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 110.11 3 -1.818448774788144 0.44554140127388536 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 28643 8285 FSLLQPVP True NCI_RA007_Epitope_Rep5 899.5116540711899 899.51054993586 38.546 2 -1.8184612709929726 0.44554140127388536 1.0 ['ENST00000267102.12_1_12:49498261-49498554:-|nuORF'] 74627 22472 NGIYRKLM True PC9_epitope_Rep6 993.5429712828098 993.54186993586 99.434 2 -1.8185067512548152 0.44554140127388536 1.0 ['ENSG00000135776|ENST00000344517|ABCB10'] 30845 23103 GAPGTALRRSR True PC9_epitope_Rep1 1140.6475874637201 1140.64707496793 93.667 1 -1.8186251665078288 0.4455645604093914 1.0 ['ENST00000401533.6_1_2:26411135-26411324:+|nuORF'] 48565 1810 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 9.4026 3 -1.818625571581423 0.4455645604093914 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 93323 9741 RPSQDCHNLP True PC9_epitope_Rep2 1165.5298403998102 1165.52874993586 42.809 2 -1.8187129490953458 0.44557064889142683 1.0 ['ENST00000527969.1_1_11:65637983-65638631:-|nuORF', 'ENSG00000172638|ENST00000307998|EFEMP2'] 70442 2098 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 10.869 3 -1.8188971929719893 0.4456096811033998 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 8887 14485 AVFPSIVG True NCI_RA007_Epitope_Rep4 788.4432401582 788.44214993586 63.07 2 -1.8190085546036068 0.44561576895624005 1.0 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.V47Afs*21|1|0.07|ENSG00000143632|chr1:229432870-229432870|A/-|frameshift_variant', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTB|p.R28W|1|0.11|ENSG00000075624|chr7:5529576-5529576|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTC1|p.R39C|1|0.13|ENSG00000159251|chr15:34794694-34794694|G/A|missense_variant'] 115352 12949 TRINISLLKYQ True NCI_RA007_Epitope_Rep2 1347.7874349814701 1347.78632993586 54.991 2 -1.8191421759926676 0.44561696333468764 1.0 ['ENST00000515764.2_1_4:25930809-25931061:+|nuORF'] 123610 14289 VGQGAGSE True NCI_RA007_Epitope_Rep3 703.31368254063 703.3131349679301 63.529 1 -1.819143268202697 0.44561696333468764 1.0 ['ENST00000450514.5_1_6:33218411-33219299:+|nuORF', 'ENST00000427196.1_1_6:33218396-33219400:+|nuORF'] 111353 24488 THQPGLRIPL True NCI_RA007_Epitope_Rep2 1130.6560268890998 1130.65492993586 102.87 2 -1.8191946040913543 0.4456242450861974 1.0 ['ENSG00000170953|ENST00000306842|OR8B12'] 41663 10687 IAGDTSGDYR True H1975_Epitope_Rep1 1053.47270236317 1053.4716099358602 46.066 2 -1.819210616223503 0.4456242450861974 1.0 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 111006 9642 THCATQCSWD True H1975_Epitope_Rep2 1150.41717871634 1150.41553490379 42.066 3 -1.8192650741839298 0.4456242450861974 1.0 ['OR10K1|p.G40Afs*105|1|0.54|ENSG00000173285|chr1:158465678-158465678|G/-|frameshift_variant'] 141999 7808 YVKDWWLFGFY True PC9_epitope_Rep5 1522.7285231230198 1522.72687490379 34.978 3 -1.8194181891418333 0.44563641953619115 1.0 ['EDNRA|p.D253Y|1|0.12|ENSG00000151617|chr4:147535886-147535886|G/T|missense_variant'] 58005 10643 LEHGVVYE True NCI_RA007_Epitope_Rep5 944.4603467743199 944.45924993586 47.575 2 -1.819423357885056 0.44563641953619115 1.0 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1', 'PREX1|p.H850Q|1|0.3|ENSG00000124126|chr20:48651501-48651501|G/T|missense_variant'] 37750 16367 GWWAGQVG True NCI_RA007_Epitope_Rep4 859.3976869481099 859.39658993586 70.96 2 -1.8195163079844598 0.44565348676336564 1.0 ['ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF'] 97617 6430 SEFDTEREQL True H1975_Epitope_Rep2 1252.5571602631198 1252.55606993586 29.653 2 -1.8195828168285235 0.44565957353361 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.E939Sfs*27|1|0.29|ENSG00000077063|chr7:117767144-117767144|C/-|frameshift_variant'] 5591 10069 ANIGPLLV True PC9_epitope_Rep6 795.48543932335 795.48434993586 49.323 2 -1.8196454515676104 0.44566196007817477 1.0 ['ENSG00000101276|ENST00000645534|SLC52A3', 'nc|ENSG00000101276|Q9NQ40-2|SLC52A3'] 99431 10944 SIAETYGRIE True NCI_RA007_Epitope_Rep4 1137.56660274801 1137.56550993586 48.959 2 -1.819916559144034 0.44566196007817477 1.0 ['ENSG00000115998|ENST00000264434|C2orf42'] 136383 15703 WTPVNGTD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 68.203 2 -1.819950809440267 0.44566196007817477 1.0 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1', 'nc|ENSG00000153956|P54289-4|CACNA2D1', 'nc|ENSG00000153956|P54289-5|CACNA2D1', 'nc|ENSG00000153956|P54289|CACNA2D1'] 107796 19907 SVTITSRYD True PC9_epitope_Rep3 1040.51383889916 1040.51274993586 81.814 2 -1.81997707407447 0.44566196007817477 1.0 ['ENSG00000137992|ENST00000370132|DBT'] 66994 12880 LSPKEQRAF True PC9_epitope_Rep1 1074.5821932425 1074.58108993586 54.416 2 -1.8200804861912188 0.4456680464212387 1.0 ['SAMD9|p.D1218Afs*2|1|0.13|ENSG00000205413|chr7:93102445-93102446|-/G|frameshift_variant', 'ENSG00000205413|ENST00000379958|SAMD9'] 102970 23154 SPFCSCLL True H1975_Epitope_Rep2 868.38229677776 868.38118993586 95.524 2 -1.8201621000539003 0.44567413263065436 1.0 ['ENST00000334801.7_1_11:118768619-118768991:-|nuORF'] 66301 23381 LSFQMVKP True PC9_epitope_Rep1 948.5102741721998 948.5097249679301 94.716 1 -1.820222958943403 0.44568021870642616 1.0 ['ENSG00000129450|ENST00000250360|SIGLEC9'] 34656 7189 GQAVGVRAL True PC9_epitope_Rep6 869.5083000262499 869.50720993586 36.738 2 -1.8203794134304645 0.44569728376627654 1.0 ['ENST00000424383.4_1_7:1784183-1785002:+|nuORF'] 43775 14179 IHLRKAGH True PC9_epitope_Rep6 930.55116789774 930.55006993586 66.418 2 -1.820461400219591 0.4457094550085635 1.0 ['nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 13680 3991 DPRRVLWGDFQ True NCI_RA007_Epitope_Rep2 1387.6996826062298 1387.69804490379 20.161 3 -1.8204803785883747 0.4457094550085635 1.0 ['ENST00000261772.12_1_16:70316640-70323405:-|nuORF'] 139645 17161 YMLEKWRWMVF True NCI_RA007_Epitope_Rep2 1587.77304787063 1587.7719499358602 71.492 2 -1.8205399278475967 0.445721625716356 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 57643 18956 LEEEKSRLL True PC9_epitope_Rep5 1115.6186383208699 1115.61754993586 77.938 2 -1.8205666682254682 0.445721625716356 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 75532 7239 NKVAITVP True PC9_epitope_Rep1 840.50690304392 840.50580993586 32.658 2 -1.8207605636462865 0.4457386893848738 1.0 ['nc|ENSG00000165458|O15357-2|INPPL1', 'ENSG00000165458|ENST00000298229|INPPL1'] 85906 14894 QHGAGHGG True NCI_RA007_Epitope_Rep5 719.3099345728699 719.3093849679301 63.96 1 -1.8209983480979728 0.44575575267872825 1.0 ['PTPN14|p.Y570Ifs*131|1|0.11|ENSG00000152104|chr1:214384147-214384148|-/T|frameshift_variant'] 101672 12810 SLLVSSPGVP True H1975_Epitope_Rep3 954.5385970950199 954.53750993586 54.493 2 -1.8210800281391761 0.4457569436820727 1.0 ['ENST00000307533.10_1_4:6675805-6675937:+|nuORF'] 22072 11200 ESMKYWRE True PC9_epitope_Rep1 1127.5069796969099 1127.50588993586 47.962 2 -1.821097533268678 0.4457569436820727 1.0 ['nc|ENSG00000141255|Q8NHS9-3|SPATA22', 'ENSG00000141255|ENST00000572969|SPATA22', 'nc|ENSG00000141255|Q8NHS9-2|SPATA22'] 70993 11804 LYIATTVFSYF True NCI_RA007_Epitope_Rep4 1323.6750905678298 1323.6734549037901 52.381 3 -1.8211633115145114 0.4457630281806106 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 32629 24089 GGKYKTRLKQL True NCI_RA007_Epitope_Rep2 1290.77720465094 1290.7761099358602 101.2 2 -1.8213263018488983 0.44576540973708767 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 49503 21759 KFGRRHVRWW True PC9_epitope_Rep6 1426.78469007322 1426.7835899358602 96.588 2 -1.821515100002403 0.44576540973708767 1.0 ['ENST00000542104.5_2_12:65089076-65089520:+|nuORF'] 16982 22922 EFYKIIPLL True PC9_epitope_Rep2 1134.6688829885798 1134.6677899358601 93.674 2 -1.8215423514718245 0.44576540973708767 1.0 ['ENSG00000143819|ENST00000272167|EPHX1'] 22897 5532 EVDVVGNIP True NCI_RA007_Epitope_Rep1 940.4865615221598 940.48546993586 25.587 2 -1.8215423570555196 0.44576540973708767 1.0 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48668655-48668709:-|nuORF'] 36472 14960 GVGGPFPA True PC9_epitope_Rep4 700.3544251538 700.3538749679301 65.483 1 -1.8219251270133512 0.44581050967649866 1.0 ['ENST00000375151.4_1_X:54471110-54471305:+|nuORF'] 128972 20849 VQKHLILE True H1975_Epitope_Rep2 978.5862159937799 978.58510993586 86.326 2 -1.821994785949675 0.44581050967649866 1.0 ['ENST00000342992.10_3_2:179584742-179584871:-|nuORF'] 92146 8656 RLEFLPRESV True PC9_epitope_Rep4 1244.6877209402 1244.68606490379 40.786 3 -1.8220661273375085 0.44583854749829854 1.0 ['ENST00000444836.5_1_1:12072009-12072201:+|nuORF'] 101199 11723 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 51.746 2 -1.8222713562954147 0.4458665847045522 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 137907 9908 YEWWFRWRLDR True NCI_RA007_Epitope_Rep2 1711.8371791385496 1711.8360899358602 43.166 2 -1.8225969932489912 0.4458787499588369 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 130302 22503 VSHNRSLW True PC9_epitope_Rep2 997.50936265541 997.50826993586 92.048 2 -1.8226001598258634 0.4458787499588369 1.0 ['ENST00000587396.1_1_18:47813113-47813998:-|nuORF'] 53460 22846 KRFVGSLG True H1975_Epitope_Rep2 862.5024863698198 862.50138993586 94.322 2 -1.822664518414206 0.44589580909310444 1.0 ['ENSG00000104643|ENST00000221086|MTMR9'] 49610 11093 KGCNGHAG True NCI_RA007_Epitope_Rep3 742.31805672842 742.3175049679301 50.733 1 -1.82280846387652 0.4459128678528698 1.0 ['EXPH5|p.D150N|1|0.06|ENSG00000110723|chr11:108528180-108528180|C/T|missense_variant'] 110067 11740 TELLLIGAPL True NCI_RA007_Epitope_Rep2 1038.6324974798597 1038.6314099358601 50.263 2 -1.822975065967616 0.4459260722595373 1.0 ['nc|ENSG00000005844|P20701-3|ITGAL', 'ENSG00000005844|ENST00000356798|ITGAL', 'nc|ENSG00000005844|P20701-2|ITGAL'] 22008 13800 ESHSQKSLFP True PC9_epitope_Rep4 1158.56693710118 1158.5658499358601 60.978 2 -1.8230424283235172 0.4459260722595373 1.0 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 126050 16201 VLEEEFRWLLH True PC9_epitope_Rep2 1469.76669953689 1469.76560993586 67.567 2 -1.8231550001624086 0.4459260722595373 1.0 ['ENST00000585871.1_1_16:4851502-4852800:-|nuORF', 'ENSG00000067836|ENST00000322048|ROGDI'] 126438 23285 VLKQFLLQR True PC9_epitope_Rep2 1143.7128134892298 1143.7111649037902 95.049 3 -1.8232042510281286 0.4459260722595373 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 83457 26396 PTPPDELLPQA True PC9_epitope_Rep2 1176.60265390356 1176.60100490379 107.86 3 -1.8234798907865881 0.4459260722595373 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 94156 11573 RRNSWGEGVI True H1975_Epitope_Rep1 1172.6050539453997 1172.60394993586 49.502 2 -1.8235146879049595 0.4459260722595373 1.0 ['ENST00000531976.1_1_11:1490888-1491104:-|nuORF'] 38673 21288 HFTRQLARQ True H1975_Epitope_Rep2 1155.6261237431497 1155.62446490379 88.096 3 -1.8235620428736612 0.4459260722595373 1.0 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.E602Kfs*8|1|0.29|ENSG00000156802|chr8:123349287-123349288|-/TT|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'ENST00000519124.5_1_8:124382257-124392860:-|nuORF'] 61409 21660 LITRNTEKA True PC9_epitope_Rep5 1044.5927579262 1044.5916699358602 88.362 2 -1.8235992010905058 0.4459260722595373 1.0 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 14884 22078 DWRCRLSW True H1975_Epitope_Rep2 1120.52363282056 1120.5225299358601 91.258 2 -1.8236284421254387 0.4459260722595373 1.0 ['ENST00000473592.1_1_10:43048075-43048180:-|nuORF'] 128725 11885 VPYDFEKFKF True PC9_epitope_Rep1 1318.6597748568595 1318.6581149037902 50.581 3 -1.8237739089406289 0.4459260722595373 1.0 ['MEFV|p.Q370Sfs*10|1|0.5|ENSG00000103313|chr16:3249583-3249583|G/-|frameshift_variant', 'nc|ENSG00000103313|O15553-3|MEFV', 'nc|ENSG00000103313|O15553-1|MEFV', 'MEFV|p.L752Ffs*19|1|0.56|ENSG00000103313|chr16:3243233-3243233|G/-|frameshift_variant', 'ENSG00000103313|ENST00000219596|MEFV'] 130333 24905 VSKKLAPI True H1975_Epitope_Rep2 854.5589386167799 854.5583949679301 102.37 1 -1.8237891437292215 0.4459260722595373 1.0 ['nc|ENSG00000006740|Q17R89-2|ARHGAP44', 'nc|ENSG00000006740|Q17R89-3|ARHGAP44', 'ENSG00000006740|ENST00000379672|ARHGAP44', 'ARHGAP44|p.R645W|1|0.17|ENSG00000006740|chr17:12980227-12980227|C/T|missense_variant'] 65726 14825 LSCLLYIIR True PC9_epitope_Rep1 1092.63653731448 1092.6354299358602 61.846 2 -1.8238122952634965 0.4459260722595373 1.0 ['KCNT2|p.I629Mfs*5|1|0.2|ENSG00000162687|chr1:196333957-196333957|A/-|frameshift_variant', 'KCNT2|p.S950Lfs*28|1|0.58|ENSG00000162687|chr1:196280921-196280921|G/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2', 'ENST00000451324.6_1_1:196367785-196577439:-|nuORF'] 129752 20749 VRQQLKKLEEL True H1975_Epitope_Rep2 1382.82454876618 1382.82289490379 85.92 3 -1.8238188940125768 0.4459260722595373 1.0 ['nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 101685 2852 SLMELWSLM True NCI_RA007_Epitope_Rep1 1108.52968928744 1108.52858993586 14.917 2 -1.8242431702471429 0.4459368998628258 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P1059Rfs*35|1|0.35|ENSG00000080603|chr16:30720897-30720897|C/-|frameshift_variant', 'SRCAP|p.Q1189Sfs*2|1|0.18|ENSG00000080603|chr16:30722142-30722142|G/-|frameshift_variant', 'SRCAP|p.A1596Sfs*250|1|0.25|ENSG00000080603|chr16:30724210-30724214|GCAAT/-|frameshift_variant'] 87188 19540 QPIKKKIP True PC9_epitope_Rep5 950.6276868829399 950.62713496793 80.214 1 -1.8242897772773259 0.4459368998628258 1.0 ['ENST00000605105.5_1_3:10334350-10334509:+|nuORF'] 48563 938 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 4.8954 3 -1.8243174760464362 0.4459368998628258 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 118625 14702 TYSLAQNPE True PC9_epitope_Rep3 1021.4716397340101 1021.47107496793 61.691 1 -1.8243754862365607 0.4459368998628258 1.0 ['PCDHB1|p.V352Cfs*14|1|0.21|ENSG00000171815|chr5:141052524-141052524|G/-|frameshift_variant', 'PCDHB1|p.A534Qfs*9|1|0.19|ENSG00000171815|chr5:141053069-141053069|G/-|frameshift_variant', 'ENSG00000171815|ENST00000306549|PCDHB1'] 94084 23832 RRLKHPQA True H1975_Epitope_Rep3 1004.5991807193199 1004.59808993586 99.378 2 -1.824461850598582 0.4459368998628258 1.0 ['ENSG00000167880|ENST00000301607|EVPL', 'ENST00000587569.5_1_17:74014525-74023279:-|nuORF', 'ENSG00000214860|ENST00000399134|EVPLL'] 28632 19808 FSKTRSKDI True PC9_epitope_Rep2 1080.5927579262 1080.5916699358602 81.581 2 -1.8245897127901345 0.4459368998628258 1.0 ['nc|ENSG00000112118|P25205-2|MCM3', 'ENSG00000112118|ENST00000596288|MCM3', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 113832 23566 TNFKIPLLKNK True PC9_epitope_Rep1 1314.8023567696198 1314.8007149037899 95.434 3 -1.8246186344015598 0.4459368998628258 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 94271 23287 RRRDPRRR True NCI_RA007_Epitope_Rep4 1166.6969376979798 1166.69584993586 101.13 2 -1.824765330995299 0.4459368998628258 1.0 ['nc|ENSG00000251359|Q96NR7|WWC2-AS2', 'ENST00000578387.1_1_4:184019140-184020019:-|nuORF'] 130334 25473 VSKKLAPI True NCI_RA007_Epitope_Rep5 854.5589386167799 854.5583949679301 105.52 1 -1.8247733861354167 0.4459368998628258 1.0 ['nc|ENSG00000006740|Q17R89-2|ARHGAP44', 'nc|ENSG00000006740|Q17R89-3|ARHGAP44', 'ENSG00000006740|ENST00000379672|ARHGAP44', 'ARHGAP44|p.R645W|1|0.17|ENSG00000006740|chr17:12980227-12980227|C/T|missense_variant'] 82312 16959 PPIMLIGH True H1975_Epitope_Rep2 876.4891448047999 876.48804993586 70.478 2 -1.824955779280901 0.44595395386607556 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 29898 15457 FVVLIVPM True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 67.123 2 -1.825186437201149 0.44599295488713553 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 136416 10551 WTWYRARARRC True NCI_RA007_Epitope_Rep2 1523.7680540329097 1523.76694993586 45.638 2 -1.8254494760086608 0.44599903432534455 1.0 ['ENST00000222823.8_1_7:30492653-30496398:-|nuORF'] 39775 24153 HLWRRGVSGHV True PC9_epitope_Rep2 1302.7057710461802 1302.70411490379 98.43 3 -1.825575555976359 0.44600511363012874 1.0 ['ENST00000455372.2_1_19:2736989-2737118:-|nuORF'] 129031 23589 VQMRNLGNLE True NCI_RA007_Epitope_Rep3 1172.59719168364 1172.5960899358602 102.32 2 -1.8255919614512393 0.4460111928014924 1.0 ['ENST00000447107.1_1_14:64821594-64823926:-|nuORF'] 136517 21943 WVWHWRRWVHA True NCI_RA007_Epitope_Rep1 1617.82180385793 1617.8207099358601 89.85 2 -1.8257110759395605 0.4460123776500022 1.0 ['ENST00000233202.10_1_2:219261288-219261426:+|nuORF'] 22473 5469 ETFEIFYL True NCI_RA007_Epitope_Rep3 1060.5117136408398 1060.5106099358602 28.52 2 -1.8257169413279806 0.4460123776500022 1.0 ['ENST00000398117.1_1_18:60986227-60986365:-|nuORF'] 26068 23607 FGKVKVGK True PC9_epitope_Rep6 861.5436229058098 861.54252993586 103.95 2 -1.8257438696839068 0.446017116524029 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 27042 21550 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 89.979 2 -1.8257933146453484 0.446017116524029 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 98993 16393 SHDGPAPL True PC9_epitope_Rep6 792.3766171503601 792.37552993586 75.446 2 -1.8259512552550203 0.446017116524029 1.0 ['ENST00000561028.5_1_14:24583940-24584093:-|nuORF'] 83331 6399 PTEDNDLSR True PC9_epitope_Rep4 1045.46761698273 1045.4665099358601 31.705 2 -1.826125474000032 0.446017116524029 1.0 ['ENSG00000083093|ENST00000261584|PALB2', 'PALB2|p.M875Cfs*14|1|0.11|ENSG00000083093|chr16:23626362-23626362|G/-|frameshift_variant'] 5945 21748 APGTGRGRGRP True PC9_epitope_Rep6 1080.5900725875997 1080.5894749679298 96.546 1 -1.8261830287603482 0.446017116524029 1.0 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 6243 7382 APQKLTDK True PC9_epitope_Rep3 899.5076313199099 899.50652993586 33.404 2 -1.8262370270407564 0.446017116524029 1.0 ['ENSG00000146950|ENST00000380913|SHROOM2'] 59966 9469 LGGYPGCA True NCI_RA007_Epitope_Rep2 736.32141077336 736.3208649679301 41.444 1 -1.8262386924015832 0.446017116524029 1.0 ['ENST00000494348.1_1_19:7974966-7975513:+|nuORF'] 113067 12464 TLNPKYSL True PC9_epitope_Rep2 934.5123823471799 934.51128993586 53.253 2 -1.826263034809656 0.446017116524029 1.0 ['ENSG00000139865|ENST00000553443|TTC6', 'nc|ENSG00000139865|Q86TZ1|TTC6', 'nc|ENSG00000139865|Q86TZ1-2|TTC6'] 87116 8762 QNTEKFMAK True H1975_Epitope_Rep2 1095.5382798251899 1095.5371899358602 38.666 2 -1.8263818016309805 0.4460292730025674 1.0 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'nc|ENSG00000075292|Q14966-5|ZNF638'] 140874 11067 YSECHDFWVN True NCI_RA007_Epitope_Rep5 1298.5026225924598 1298.50096490379 49.203 3 -1.8265574097851798 0.4460292730025674 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1', 'nc|ENSG00000185513|Q9Y468-1|L3MBTL1', 'nc|ENSG00000185513|Q9Y468|L3MBTL1', 'ENSG00000185513|ENST00000418998|L3MBTL1', 'nc|ENSG00000185513|Q9Y468-2|L3MBTL1'] 130254 8523 VSGCVHPP True PC9_epitope_Rep4 794.37450897538 794.37340993586 40.26 2 -1.826669295554057 0.44603045729834107 1.0 ['ENST00000593726.5_1_19:41305451-41305802:+|nuORF'] 48564 1675 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 8.7077 3 -1.8267378220343464 0.44603045729834107 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 36978 18975 GVMWRSPWEPL True PC9_epitope_Rep2 1356.6648773206398 1356.66376993586 78.352 2 -1.8269280584386134 0.4460365351911789 1.0 ['ENST00000409594.5_1_2:220073936-220074341:+|nuORF'] 36606 18026 GVHVKLAH True PC9_epitope_Rep5 859.50282072299 859.50172993586 74.353 2 -1.8271275887708598 0.4460608454289131 1.0 ['ENSG00000104879|ENST00000221476|CKM'] 29944 23271 FWAVQPRRR True PC9_epitope_Rep4 1214.6784936691797 1214.67685490379 97.764 3 -1.8271604567095245 0.4460608454289131 1.0 ['ENST00000587101.1_1_19:36231353-36231398:-|nuORF'] 38789 21828 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 90.27 2 -1.8271642113402666 0.4460608454289131 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 36601 24349 GVHSGPAH True PC9_epitope_Rep4 760.36163579256 760.36052993586 102.14 2 -1.8272181522133868 0.4460608454289131 1.0 ['ENST00000589389.5_1_16:4854724-4855165:-|nuORF'] 80643 23161 PGSKPFCPT True NCI_RA007_Epitope_Rep5 932.4425885351999 932.44148993586 96.347 2 -1.827290660707901 0.446062028940988 1.0 ['ENSG00000213445|ENST00000534313|SIPA1'] 97042 22106 SCTIADLS True H1975_Epitope_Rep2 808.36366950816 808.36256993586 91.373 2 -1.8273567337971641 0.446062028940988 1.0 ['ENST00000304056.8_1_7:32919423-32919537:-|nuORF'] 34585 16688 GPSYGSQN True PC9_epitope_Rep6 808.3351462612001 808.33404993586 76.659 2 -1.8274629644617477 0.4460741829670993 1.0 ['nc|ENSG00000105991|P49639-2|HOXA1', 'nc|ENSG00000105991|P49639-3|HOXA1', 'nc|ENSG00000105991|P49639|HOXA1', 'ENSG00000105991|ENST00000643460|HOXA1'] 96673 25144 SAKKPCPV True PC9_epitope_Rep1 828.4527592960799 828.45166993586 101.6 2 -1.8274733161425878 0.4460741829670993 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 48599 25051 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 102.94 3 -1.8276823256157226 0.44608144280135154 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 133518 24474 VWMKRAQF True PC9_epitope_Rep2 1064.5589557001197 1064.55784993586 99.729 2 -1.8277931868516253 0.44608144280135154 1.0 ['nc|ENSG00000080854|Q9UPX0|IGSF9B', 'ENSG00000080854|ENST00000533871|IGSF9B'] 122164 22638 VGAGSLCQALL True PC9_epitope_Rep1 1030.5481162329 1030.5470099358602 91.883 2 -1.8277984163680403 0.44608144280135154 1.0 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 3447 8916 AGKTPFQSF True NCI_RA007_Epitope_Rep4 981.4919812557699 981.49088993586 41.127 2 -1.827881263777512 0.4460875193347741 1.0 ['ENST00000513750.5_1_11:67067055-67069800:+|nuORF', 'ENST00000512231.5_1_11:67066841-67069800:+|nuORF', 'nc|ENSG00000172932|Q6ZTN6-1|ANKRD13D', 'ENSG00000172932|ENST00000511455|ANKRD13D'] 59061 8680 LEVWLSHEG True NCI_RA007_Epitope_Rep3 1068.52400966004 1068.52290993586 41.222 2 -1.8280027999539548 0.4461008545320916 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 87538 8320 QQKKAHVL True NCI_RA007_Epitope_Rep2 950.5661492555397 950.56504993586 37.004 2 -1.8280090949158072 0.4461008545320916 1.0 ['nc|ENSG00000095627|Q9BXT4-2|TDRD1', 'ENSG00000095627|ENST00000695399|TDRD1', 'nc|ENSG00000095627|Q9BXT4-3|TDRD1'] 36475 5325 GVGGRWTRWRR True H1975_Epitope_Rep1 1385.75411822093 1385.75302993586 25.546 2 -1.8280191754321573 0.4461008545320916 1.0 ['ENST00000229329.6_1_12:22199202-22199379:+|nuORF'] 29609 26079 FVIFMFFLN True PC9_epitope_Rep1 1176.6041745570399 1176.60253490379 105.57 3 -1.8281115032414559 0.4461008545320916 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 100505 6520 SLARDPLP True PC9_epitope_Rep1 867.4814165720699 867.48030993586 29.882 2 -1.8283235653636758 0.44611165953712845 1.0 ['ENST00000371822.9_1_X:117480162-117480498:+|nuORF'] 16533 11918 EELNRRYH True NCI_RA007_Epitope_Rep1 1115.54720471611 1115.5461099358602 50.342 2 -1.8283308604539068 0.44611165953712845 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 12765 8219 DLELFICEL True H1975_Epitope_Rep3 1093.53654848969 1093.53544993586 36.597 2 -1.8283680199845986 0.44611165953712845 1.0 ['chr8:123194148-123202384|366|13.69|0.72|4.25|+|2|TE_info:L2b,L2b_dup46378,L2,LINE,acceptor,+,123202384,123202636|FAM83A,None|1'] 10351 10470 CGAGPHET True NCI_RA007_Epitope_Rep3 770.3017379579401 770.30064993586 48.247 2 -1.82841444109309 0.44611165953712845 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant', 'CLSTN2|p.W138Cfs*39|1|0.25|ENSG00000158258|chr3:140403809-140403810|-/C|frameshift_variant'] 116004 9243 TSLFIRNVA True PC9_epitope_Rep5 1019.57637958607 1019.57528993586 40.5 2 -1.828656340076228 0.44611165953712845 1.0 ['ENSG00000154548|ENST00000452027|SRSF12'] 23443 24611 EVTGPCPA True H1975_Epitope_Rep1 772.34254014076 772.3414499358599 101.98 2 -1.8287802065154317 0.44611165953712845 1.0 ['ENST00000487192.1_1_2:242162779-242163565:+|nuORF'] 136159 20680 WRRLSNAVDC True NCI_RA007_Epitope_Rep5 1218.59277500954 1218.5911349037901 86.503 3 -1.8288119765598414 0.44611165953712845 1.0 ['ENST00000486209.5_1_22:21827366-21827621:-|nuORF'] 77236 19635 NRWRRSKRA True NCI_RA007_Epitope_Rep1 1228.7013543720798 1228.69969490379 80.565 3 -1.8288350449406594 0.44611165953712845 1.0 ['ENSG00000147655|ENST00000276659|RSPO2'] 135634 7126 WLLIHIIFIC True NCI_RA007_Epitope_Rep2 1269.73077205249 1269.72913490379 32.339 3 -1.8288448633787249 0.44611165953712845 1.0 ['ENST00000357103.4_1_12:1895519-1895615:+|nuORF'] 10881 24412 CYCEDGFE True H1975_Epitope_Rep3 964.2942696189998 964.29316993586 101.63 2 -1.8289535009380034 0.44612499177397064 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R2486Efs*2|1|0.46|ENSG00000168702|chr2:140541030-140541030|T/-|frameshift_variant', 'LRP1B|p.I1892Nfs*4|1|0.17|ENSG00000168702|chr2:140769298-140769299|-/C|frameshift_variant', 'LRP1B|p.P1164Lfs*15|1|0.3|ENSG00000168702|chr2:140907906-140907906|G/-|frameshift_variant', 'LRP1B|p.L1245Pfs*6|1|0.09|ENSG00000168702|chr2:140902952-140902953|-/G|frameshift_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 124235 7230 VGTGFGSK True PC9_epitope_Rep2 751.38645355807 751.3859049679301 33.199 1 -1.8290170507064405 0.44612499177397064 1.0 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF'] 59361 24790 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 107.19 2 -1.8290298779575171 0.44612499177397064 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 81388 7402 PLDQYSPSFP True PC9_epitope_Rep1 1149.5342399905699 1149.5331499358601 33.285 2 -1.8290934676902464 0.44612499177397064 1.0 ['nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-3|FGFR1', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF'] 117974 9034 TYCSKAFR True PC9_epitope_Rep5 974.4643866089399 974.46328993586 39.694 2 -1.8293514220096077 0.44615654577159714 1.0 ['ENSG00000136451|ENST00000581208|VEZF1'] 34280 16963 GNVTSLGYRKY True PC9_epitope_Rep6 1256.6513354314798 1256.6502299358601 77.794 2 -1.829406614903663 0.44615654577159714 1.0 ['nc|ENSG00000186448|O14709-2|ZNF197'] 825 26438 ACKLILYLKQ True NCI_RA007_Epitope_Rep5 1191.70495122747 1191.70330490379 109.3 3 -1.8294693351938691 0.44615654577159714 1.0 ['ENST00000587842.1_1_18:56212428-56246221:-|nuORF'] 108756 5287 SYSIYIYKVLK True PC9_epitope_Rep1 1375.7751389622697 1375.7734949037902 25.179 3 -1.8295772111286372 0.44615654577159714 1.0 ['ENSG00000146047|ENST00000274764|H2BC1'] 36050 18953 GVAAAGHA True PC9_epitope_Rep4 652.3292730351201 652.32872496793 80.99 1 -1.8296239514049149 0.44615654577159714 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 8210 17868 ATFRRKRP True NCI_RA007_Epitope_Rep5 1030.6148307834596 1030.61427496793 75.527 1 -1.8296472272313946 0.44615654577159714 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 79541 11222 PDCHKSFSQSS True NCI_RA007_Epitope_Rep5 1221.5084362488901 1221.50680490379 49.801 3 -1.8296765557437362 0.44615654577159714 1.0 ['ENSG00000196391|ENST00000354377|ZNF774'] 119258 23815 VALKPLGGL True NCI_RA007_Epitope_Rep3 866.5589386167799 866.5583949679301 103.2 1 -1.8297075074266966 0.4461587385134987 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 105337 17284 SRPRKIVDR True H1975_Epitope_Rep2 1125.6730739355698 1125.67141490379 71.774 3 -1.8298197359785158 0.4461587385134987 1.0 ['nc|ENSG00000049449|Q15293-2|RCN1'] 119254 25232 VALKPLGGL True H1975_Epitope_Rep2 866.5589386167799 866.5583949679301 103.66 1 -1.8298204512265568 0.4461587385134987 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 24928 21413 FCKQCCKIY True H1975_Epitope_Rep2 1134.5024289937799 1134.50077490379 88.597 3 -1.8298243645479373 0.4461587385134987 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 136373 23752 WTIFLFLRWVL True PC9_epitope_Rep3 1492.8594777229198 1492.85782490379 96.647 3 -1.8299593614531107 0.4461587385134987 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 123353 6142 VGLVQGWG True H1975_Epitope_Rep3 814.43373810366 814.43264993586 28.636 2 -1.8299661345444826 0.4461587385134987 1.0 ['ENST00000584516.5_1_17:73585822-73586164:+|nuORF'] 23341 16043 EVRFYVPP True PC9_epitope_Rep6 1005.5283667644898 1005.52726993586 74.034 2 -1.830119466400404 0.4461587385134987 1.0 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57100225-57103093:-|nuORF'] 81638 20704 PLLLALRW True PC9_epitope_Rep6 980.61712219924 980.61602993586 92.4 2 -1.830194565949414 0.4461587385134987 1.0 ['ENSG00000170128|ENST00000304244|GPR25'] 30712 12327 GALGLGPRPPP True PC9_epitope_Rep2 1030.5923640033798 1030.59126993586 52.728 2 -1.8302270761996502 0.4461587385134987 1.0 ['ENSG00000215612|ENST00000400677|HMX1'] 93444 19054 RQGRPVIVVID True NCI_RA007_Epitope_Rep3 1250.7459045226599 1250.74426490379 83.243 3 -1.8302598551804394 0.4461587385134987 1.0 ['ENST00000244745.3_2_6:21596320-21596539:+|nuORF'] 133834 17624 VYGFMMLVL True PC9_epitope_Rep6 1071.54969645603 1071.54858993586 80.43 2 -1.8302908897714973 0.4461587385134987 1.0 ['ENSG00000077147|ENST00000371142|TM9SF3'] 10493 19532 CITPKRRLTR True NCI_RA007_Epitope_Rep5 1242.7342942931398 1242.73264490379 82.017 3 -1.8304175810766599 0.4461587385134987 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 92953 19748 RPHLVLRAQ True NCI_RA007_Epitope_Rep4 1088.65669559544 1088.65558993586 85.34 2 -1.8304197773961224 0.4461587385134987 1.0 ['ENST00000531896.5_1_8:145541583-145550314:-|nuORF'] 116092 21992 TSRCKVCA True PC9_epitope_Rep6 866.4102428610998 866.40914993586 97.513 2 -1.830543646626613 0.44618674269422665 1.0 ['SYTL4|p.W100S|1|0.22|ENSG00000102362|chrX:100701485-100701485|C/G|missense_variant'] 86707 21792 QLKKMVSKFL True PC9_epitope_Rep6 1220.73150032848 1220.73040993586 96.715 2 -1.8309279517067913 0.4462366770472389 1.0 ['ENST00000438874.6_1_11:18537681-18548363:-|nuORF'] 63638 8181 LMNCCKTVIYF True NCI_RA007_Epitope_Rep5 1333.62327240245 1333.62216993586 38.149 2 -1.830973946666502 0.44624274921324164 1.0 ['ENST00000361360.3_2_2:105474794-105474911:+|nuORF'] 61820 9148 LLATQPLV True NCI_RA007_Epitope_Rep2 853.5273041353299 853.52620993586 40.191 2 -1.8310656746822331 0.44624882124607995 1.0 ['ENSG00000181656|ENST00000315033|GPR88'] 128366 13703 VPRADLIVM True PC9_epitope_Rep1 1012.5739370579199 1012.57282993586 57.559 2 -1.831372420433561 0.4462658581782695 1.0 ['nc|ENSG00000188877|Q6S8J7-2|POTEA', 'nc|ENSG00000188877|Q6S8J7|POTEA'] 49122 8342 KEITEGDEVEV True PC9_epitope_Rep5 1246.5928770655 1246.59178993586 37.028 2 -1.8314771944951043 0.44628289473684213 1.0 ['ENSG00000129245|ENST00000250113|FXR2'] 80829 24986 PHPPPSPE True H1975_Epitope_Rep2 856.4079172786401 856.40682993586 102.68 2 -1.8316323858378782 0.44629014396456257 1.0 ['ENST00000375663.7_1_6:31747884-31748258:-|nuORF'] 73509 17449 MVHRLPVFKR True NCI_RA007_Epitope_Rep4 1281.7492160812897 1281.7481099358602 75.551 2 -1.831684962432823 0.44629014396456257 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2', 'ENST00000460924.6_1_11:112046255-112064455:+|nuORF', 'ENSG00000197580|ENST00000357685|BCO2', 'BCO2|p.W79Cfs*41|1|0.19|ENSG00000197580|chr11:112179425-112179425|G/-|frameshift_variant'] 26503 8816 FIFLFFMYFRW True H1975_Epitope_Rep3 1615.8049996219097 1615.8033449037898 38.917 3 -1.8317398821774822 0.44629014396456257 1.0 ['ENST00000510312.6_1_5:73199984-73200204:+|nuORF'] 121761 17871 VFMVYNRTR True NCI_RA007_Epitope_Rep3 1184.6124478249599 1184.61079490379 78.337 3 -1.8319465597367968 0.44629739271539154 1.0 ['ENSG00000142623|ENST00000375471|PADI1'] 30334 19789 GAAPGWRW True PC9_epitope_Rep3 899.44022046643 899.43912993586 81.349 2 -1.831974948366957 0.44629739271539154 1.0 ['ENST00000375640.7_1_6:31802385-31802835:+|nuORF'] 136933 24970 YAGFHVAL True PC9_epitope_Rep3 876.4493881678 876.44828993586 101.4 2 -1.8319908334716735 0.44629739271539154 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 35205 26263 GRALWHLRLA True NCI_RA007_Epitope_Rep5 1191.69889476059 1191.6972449037899 108.61 3 -1.8322756261289737 0.4463253916914272 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 127826 23386 VPERLLGTA True PC9_epitope_Rep6 954.5498304850598 954.54872993586 103.06 2 -1.8326468784887056 0.44635339005350405 1.0 ['ENSG00000100568|ENST00000554659|VTI1B'] 129003 14880 VQLKAIPL True PC9_epitope_Rep6 880.5745886809199 880.57348993586 69.219 2 -1.8327668176969552 0.4463704239713186 1.0 ['ENSG00000064703|ENST00000369702|DDX20', 'nc|ENSG00000064703|Q9UHI6-2|DDX20'] 18513 23577 EKHIKRSKH True H1975_Epitope_Rep3 1161.6730739355698 1161.67141490379 98.364 3 -1.8329019100547315 0.44637649380550376 1.0 ['ENSG00000215421|ENST00000299687|ZNF407', 'nc|ENSG00000215421|Q9C0G0-3|ZNF407', 'nc|ENSG00000215421|Q9C0G0-2|ZNF407'] 70255 19385 LVRKARSHIG True NCI_RA007_Epitope_Rep2 1135.6938093801498 1135.6927099358602 80.307 2 -1.833004872413757 0.4463935270965125 1.0 ['PNPLA3|p.R79_N80delinsH|1|0.11|ENSG00000100344|chr22:43926983-43926985|GGA/-|inframe_deletion'] 63858 8433 LNLLQLPG True PC9_epitope_Rep4 866.5225531080599 866.52144993586 39.902 2 -1.8331388252626015 0.44642152348375214 1.0 ['SUPT20H|p.Q639Lfs*24|1|0.05|ENSG00000102710|chr13:37017321-37017322|-/TTTATTAACAATAGTA|frameshift_variant', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H', 'ENST00000490716.5_1_13:37583811-37596314:-|nuORF'] 112008 14293 TIRTHPTL True PC9_epitope_Rep3 937.5345147740899 937.53340993586 60.065 2 -1.8332325816263604 0.44642759255807835 1.0 ['ENSG00000152939|ENST00000325631|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-3|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-2|MARVELD2'] 91380 13465 RHERIEAPW True PC9_epitope_Rep2 1192.6101393258398 1192.60849490379 57.072 3 -1.8333111446125174 0.4464336614993312 1.0 ['ENSG00000158042|ENST00000288937|MRPL17'] 13021 11737 DLNEVKARV True PC9_epitope_Rep1 1042.5771078620598 1042.5760099358602 50.02 2 -1.833405495074211 0.44643483599368533 1.0 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.K985Rfs*7|1|0.35|ENSG00000108055|chr10:110602023-110602023|A/-|frameshift_variant'] 27220 18574 FLNRRRRRER True NCI_RA007_Epitope_Rep4 1457.85522924453 1457.85412993586 80.354 2 -1.8335854081899916 0.44643483599368533 1.0 ['ENSG00000150637|ENST00000582621|CD226'] 43645 23471 IHAVCGKN True NCI_RA007_Epitope_Rep3 840.4276071774 840.4265099358599 101.86 2 -1.833875720088896 0.44647007235255426 1.0 ['ENST00000477995.1_1_6:170176000-170181606:+|nuORF', 'nc|ENSG00000130023|Q5T6L9-4|ERMARD', 'nc|ENSG00000130023|Q5T6L9-2|ERMARD', 'nc|ENSG00000130023|Q5T6L9-3|ERMARD', 'ENSG00000130023|ENST00000366773|ERMARD'] 122278 3528 VGATREKE True NCI_RA007_Epitope_Rep1 888.4664947839199 888.46538993586 17.646 2 -1.8339168379707895 0.44647007235255426 1.0 ['ENST00000268206.11_1_15:82554125-82555004:-|nuORF'] 115325 24698 TRIEQRKKM True NCI_RA007_Epitope_Rep1 1188.6761107106797 1188.67500993586 102.27 2 -1.8339526650418252 0.44647007235255426 1.0 ['nc|ENSG00000100626|Q8N428-2|GALNT16', 'ENSG00000100626|ENST00000448469|GALNT16'] 15778 9554 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.6909299358601 41.16 2 -1.8339646779193668 0.44647007235255426 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 68296 6172 LTEHPDPR True NCI_RA007_Epitope_Rep5 963.4773938207899 963.47628993586 30.42 2 -1.8340909027290775 0.44649062229383846 1.0 ['COL15A1|p.V224E|1|0.18|ENSG00000204291|chr9:98987316-98987316|T/A|missense_variant'] 136543 4454 WWFQLKVWSMA True PC9_epitope_Rep5 1480.7325629576399 1480.7309249037899 22.2 3 -1.8341490841721988 0.44649062229383846 1.0 ['ENSG00000198178|ENST00000360345|CLEC4C'] 63284 21585 LLSRHQRI True PC9_epitope_Rep4 1021.61449643029 1021.61338993586 91.209 2 -1.8342348410604843 0.44649062229383846 1.0 ['ENSG00000173258|ENST00000309235|ZNF483'] 133385 9765 VVVGVVGY True H1975_Epitope_Rep1 790.45889022234 790.45778993586 42.491 2 -1.8342767980139512 0.44649062229383846 1.0 ['ENSG00000140986|ENST00000268661|RPL3L', 'RPL3L|p.P83H|1|0.31|ENSG00000140986|chr16:1952991-1952991|G/T|missense_variant'] 81254 6237 PKPKEQSG True NCI_RA007_Epitope_Rep4 869.46068112749 869.46013496793 30.596 1 -1.8343206632431157 0.44649062229383846 1.0 ['chr3:98867438-98881540|151|18.55|0.23|6.34|-|0|TE_info:L1PA5,L1PA5_dup2059,L1,LINE,acceptor,-,98865721,98867438|None,DCBLD2|5'] 129167 19628 VQRVSLVCL True PC9_epitope_Rep3 1015.5848360947898 1015.58372993586 80.736 2 -1.8343467156281266 0.44649062229383846 1.0 ['COL4A5|p.G1051Dfs*101|1|0.25|ENSG00000188153|chrX:108626254-108626254|G/-|frameshift_variant'] 11268 21188 DEGGTASKKQ True H1975_Epitope_Rep3 1019.48835242731 1019.48777496793 88.49 1 -1.8344137189113812 0.44649062229383846 1.0 ['ENST00000534350.5_1_8:146277890-146278751:+|nuORF', 'ENSG00000182307|ENST00000331434|C8orf33', 'nc|nan|Q9H7E9-2|C8orf33', 'ENST00000530455.5_1_8:146277890-146279540:+|nuORF', 'ENST00000524395.5_1_8:146277890-146279540:+|nuORF'] 71125 14971 LYLPQEQL True NCI_RA007_Epitope_Rep4 1002.5385970950199 1002.53807496793 65.051 1 -1.8344326136949745 0.4464929683988995 1.0 ['nc|nan|Q9GZU0-2|C6orf62', 'ENSG00000112308|ENST00000378119|C6orf62'] 76355 5794 NPWRWDQA True PC9_epitope_Rep5 1071.48862721083 1071.48752993586 27.28 2 -1.8345487305124337 0.4464929683988995 1.0 ['LTR12C_dup1159|chr6:63441884-63443495:-|1.4512251268435548|0.0180559155246374|6.33|493.0|76|2|anti-sense'] 136581 17806 WWIWWQWWKL True PC9_epitope_Rep3 1616.8081108564 1616.8070099358602 73.688 2 -1.8345824778700206 0.4464929683988995 1.0 ['chr12:54282841-54283827|531|24.4|0.0|21.22|+|1|HNRNPA1,HNRNPA1|1'] 11374 18816 DERAQKRQPIR True NCI_RA007_Epitope_Rep1 1395.7694935015497 1395.7683899358601 77.334 2 -1.8345943817014807 0.4464929683988995 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 62999 24791 LLPPPGHV True PC9_epitope_Rep4 828.4857736765199 828.4852249679301 103.86 1 -1.834715498560254 0.44650138103380244 1.0 ['ENST00000564426.5_1_16:2203418-2203928:+|nuORF'] 125084 12902 VIEERRNQSLS True H1975_Epitope_Rep1 1329.70007652905 1329.69896993586 54.7 2 -1.834717956389536 0.44650138103380244 1.0 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'nc|ENSG00000084234|Q06481-6|APLP2'] 82157 23110 PNLEDIYTSLC True H1975_Epitope_Rep3 1266.5802042068199 1266.57856490379 96.516 3 -1.8348111657637218 0.44650138103380244 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 120132 22903 VEAFRFAYAKR True H1975_Epitope_Rep1 1356.7302544585198 1356.72914993586 95.246 2 -1.8348660736605908 0.44650138103380244 1.0 ['nc|ENSG00000100031|P19440-2|GGT1', 'nc|ENSG00000197421|A6NGU5|GGT3P', 'ENSG00000100031|ENST00000400382|GGT1', 'nc|ENSG00000133475|P36268-3|GGT2P', 'nc|ENSG00000133475|P36268-2|GGT2P', 'nc|ENSG00000133475|P36268|GGT2P'] 4408 22772 AIPSIMNVLL True PC9_epitope_Rep2 1069.62055289717 1069.61944993586 93.081 2 -1.834941759482843 0.44650138103380244 1.0 ['ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.N1831Tfs*3|1|0.43|ENSG00000183873|chr3:38550882-38550882|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'SCN8A|p.I1682Yfs*3|1|0.25|ENSG00000196876|chr12:51806528-51806529|-/T|frameshift_variant', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN10A|p.S1938Qfs*13|1|0.18|ENSG00000185313|chr3:38697405-38697408|AGCT/-|frameshift_variant'] 82766 21436 PRLPRSTT True PC9_epitope_Rep6 926.5297637468201 926.52866993586 95.328 2 -1.8351632850562307 0.4465403290331773 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 60423 10488 LGVGEVLH True PC9_epitope_Rep5 822.4599528515 822.45884993586 45.328 2 -1.835176798784641 0.4465463951423749 1.0 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000495579.5_1_6:32088425-32095984:-|nuORF'] 29633 24199 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 106.8 3 -1.8353076268401607 0.44656342134394283 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 91496 6777 RHSRMEQE True PC9_epitope_Rep3 1071.4879755878299 1071.48686993586 31.088 2 -1.835357999247327 0.44656948706707583 1.0 ['ENST00000526977.5_1_8:145651218-145651356:-|nuORF'] 47235 15723 IVAWLSRSP True PC9_epitope_Rep3 1027.5814649665099 1027.58036993586 65.636 2 -1.8354502024756505 0.4465706582494904 1.0 ['ENST00000510733.1_1_4:155665168-155665375:+|nuORF'] 135830 4069 WNRPCGAGPD True PC9_epitope_Rep3 1071.4556128303898 1071.4545099358602 20.77 2 -1.8354573692938598 0.4465706582494904 1.0 ['ENST00000341863.10_1_10:82249024-82267129:+|nuORF', 'ENST00000372164.7_1_10:82249024-82269226:+|nuORF', 'ENST00000372157.6_1_10:82264487-82269226:+|nuORF', 'ENST00000429989.7_1_10:82249024-82269226:+|nuORF', 'ENST00000469149.1_1_10:82249024-82269286:+|nuORF'] 67421 8433 LSSPATTHTH True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 37.274 2 -1.8354828199177664 0.44657396144953265 1.0 ['ENST00000288699.10_1_2:27170870-27171059:+|nuORF'] 27504 21685 FMLVPLIK True PC9_epitope_Rep4 959.5877962169099 959.58668993586 91.613 2 -1.8356981177163612 0.44657396144953265 1.0 ['ENST00000377465.5_1_20:18508152-18508233:+|nuORF'] 38728 23985 HGGGKFKS True H1975_Epitope_Rep3 816.4242360491199 816.42312993586 99.968 2 -1.8356983219188658 0.44657396144953265 1.0 ['ENST00000304979.7_1_1:43124098-43124146:+|nuORF'] 126160 13828 VLFHFERNWPW True PC9_epitope_Rep5 1529.7568035595298 1529.75515490379 58.21 3 -1.8357789798061401 0.44657396144953265 1.0 ['ENST00000367568.4_1_6:144509016-144509238:+|nuORF'] 98632 22316 SFWSSTVTT True H1975_Epitope_Rep1 1014.46582607758 1014.46472993586 92.849 2 -1.8358715230935576 0.44657396144953265 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 86791 8499 QLNALQRHRR True NCI_RA007_Epitope_Rep1 1290.73813380362 1290.7370299358602 37.059 2 -1.8358727795335859 0.44657396144953265 1.0 ['ENSG00000125812|ENST00000338121|GZF1', 'nc|ENSG00000125812|Q9H116-4|GZF1'] 74577 23455 NGEAFKHF True PC9_epitope_Rep4 948.4453654165198 948.44426993586 98.506 2 -1.8358754791927079 0.44657396144953265 1.0 ['ENST00000370713.5_1_1:82445581-82445626:+|nuORF'] 77092 6408 NRLLMSLFLFF True PC9_epitope_Rep5 1399.76861411319 1399.76695490379 29.626 3 -1.8359397206378838 0.44657396144953265 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D'] 39353 23943 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 99.472 3 -1.8360169126908752 0.44657396144953265 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 49780 15012 KHDVAHMIV True PC9_epitope_Rep6 1048.54878493924 1048.54768993586 69.77 2 -1.8360796674013093 0.44657396144953265 1.0 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 69270 8333 LTTKTKLMML True NCI_RA007_Epitope_Rep2 1178.6766878743 1178.6750549037902 37.054 3 -1.8360911246754994 0.44657396144953265 1.0 ['ENST00000421865.2_1_6:129714284-129714326:+|nuORF'] 131292 5674 VTGCRFHVL True PC9_epitope_Rep5 1030.5382202555397 1030.53712993586 26.821 2 -1.8363167436807244 0.44657396144953265 1.0 ['nc|ENSG00000204519|Q7Z340-3|ZNF551', 'nc|ENSG00000204519|Q7Z340-2|ZNF551', 'ENSG00000204519|ENST00000282296|ZNF551'] 3359 7726 AGGSVGGH True H1975_Epitope_Rep1 640.2928875264001 640.2923349679301 34.679 1 -1.8363257745460106 0.44657396144953265 1.0 ['ENST00000320081.9_1_2:29338399-29344251:+|nuORF'] 82093 24541 PMPMKRGP True H1975_Epitope_Rep1 912.4673638144 912.4662699358599 101.7 2 -1.8363459129776396 0.44657396144953265 1.0 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2'] 119671 22153 VAVFHSSS True H1975_Epitope_Rep1 832.4079172786401 832.40682993586 92.173 2 -1.8363642666476043 0.44657396144953265 1.0 ['ENST00000273375.7_1_3:120408429-120408636:-|nuORF'] 33514 7382 GLDREQLYWEL True H1975_Epitope_Rep1 1420.6986795467199 1420.6975899358602 33.399 2 -1.8364473221881885 0.4465751323157168 1.0 ['ENSG00000181143|ENST00000397910|MUC16'] 32532 13244 GGGGFGGF True PC9_epitope_Rep2 654.2761748331 654.2756249679301 56.219 1 -1.836461097070207 0.4465751323157168 1.0 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 119121 14649 VAHLRPVP True PC9_epitope_Rep3 887.5341208512699 887.53302993586 61.481 2 -1.836552396125495 0.4465811965811966 1.0 ['ENSG00000181852|ENST00000345093|RNF41', 'ENST00000548225.1_1_12:56604079-56607800:-|nuORF'] 77922 24820 NVISTPVR True H1975_Epitope_Rep2 884.50796567308 884.50686993586 102.04 2 -1.836740909047287 0.44658726071377697 1.0 ['ENSG00000075643|ENST00000261326|MOCOS'] 18284 23149 EIRKENKREKR True PC9_epitope_Rep1 1484.85355747868 1484.8524699358602 93.835 2 -1.8369149152505309 0.4466164095371669 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000483413.1_1_10:119798481-119799811:-|nuORF'] 70452 4064 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 20.506 3 -1.8369183101723359 0.4466164095371669 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 83747 8835 PVHIEGVSKVS True PC9_epitope_Rep5 1150.63462273818 1150.63352993586 38.93 2 -1.8369257241489694 0.4466164095371669 1.0 ['ENST00000419235.6_1_6:350471-350555:+|nuORF'] 14543 25078 DTRRWKKKQ True PC9_epitope_Rep1 1244.7101877202797 1244.7090899358602 101.36 2 -1.8370794663338321 0.4466236427186168 1.0 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1'] 59040 14463 LEVRLWALA True H1975_Epitope_Rep3 1069.6284151589298 1069.62730993586 60.99 2 -1.8370796661913387 0.4466236427186168 1.0 ['ENST00000314686.9_1_3:40518691-40519449:+|nuORF'] 79969 6315 PETQTGPL True PC9_epitope_Rep5 841.4181476091699 841.41704993586 29.265 2 -1.8371200406353805 0.4466236427186168 1.0 ['ZP4|p.P312T|1|0.12|ENSG00000116996|chr1:237885792-237885792|G/T|missense_variant'] 136361 27064 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 111.71 2 -1.8373643811206777 0.4466516194065828 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 125372 10145 VIRGLMKFWP True H1975_Epitope_Rep1 1245.7056199338099 1245.7045299358601 43.961 2 -1.8376064456155394 0.4466576822360276 1.0 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 64741 25114 LPYHEVYT True PC9_epitope_Rep5 1020.4916469025999 1020.49054993586 101.74 2 -1.8376554526597793 0.4466807638789977 1.0 ['ENSG00000011028|ENST00000303375|MRC2', 'MRC2|p.R1138Gfs*67|1|0.25|ENSG00000011028|chr17:62689598-62689598|C/-|frameshift_variant'] 19134 7545 ELGPVGSRGL True H1975_Epitope_Rep3 983.5399940773499 983.53888993586 34.004 2 -1.8376763357090102 0.4466807638789977 1.0 ['COL9A1|p.P636R|1|0.08|ENSG00000112280|chr6:70242681-70242681|G/C|missense_variant'] 15772 8785 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 38.72 2 -1.8379051657601015 0.4467087387150495 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 419 23051 AALIVNNAVDY True H1975_Epitope_Rep1 1161.60298825673 1161.60188993586 95.861 2 -1.838059506942892 0.4467148006529861 1.0 ['nc|ENSG00000137261|Q5VV43-3|KIAA0319', 'nc|ENSG00000137261|Q5VV43-2|KIAA0319', 'ENSG00000137261|ENST00000378214|KIAA0319', 'nc|ENSG00000137261|Q5VV43-4|KIAA0319'] 123465 12755 VGPALAPAPAP True PC9_epitope_Rep6 959.5440168286299 959.54290993586 60.548 2 -1.8381289551855766 0.44674277450314437 1.0 ['ENSG00000105610|ENST00000264834|KLF1'] 80934 5683 PIDSLEVVR True NCI_RA007_Epitope_Rep2 1026.57095985246 1026.5698699358602 26.719 2 -1.8384637928673782 0.4467817036428376 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant'] 84069 18860 PVYVGRKV True H1975_Epitope_Rep2 916.5494365622399 916.54832993586 78.303 2 -1.8385229512476424 0.4468010517090272 1.0 ['ENST00000524233.1_1_8:101280952-101287235:-|nuORF'] 92244 25432 RLKKKHEL True NCI_RA007_Epitope_Rep3 1050.66619764998 1050.66510993586 109.94 2 -1.8385918843275775 0.4468010517090272 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'nc|ENSG00000139220|O75334-7|PPFIA2', 'nc|ENSG00000139220|O75334-8|PPFIA2'] 23516 11162 EVVLGGRLAA True PC9_epitope_Rep2 983.5763795860698 983.57528993586 48.26 2 -1.8387286290231224 0.4468010517090272 1.0 ['ENSG00000079313|ENST00000170168|REXO1'] 4558 27024 AKKRVIVKKLP True PC9_epitope_Rep2 1278.8863611770998 1278.8847149037902 111.3 3 -1.838783078110598 0.4468010517090272 1.0 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 29488 7731 FVFLVETGFC True NCI_RA007_Epitope_Rep2 1160.55761828744 1160.55652993586 34.698 2 -1.8388346223267584 0.4468010517090272 1.0 ['ENST00000320954.10_2_3:33184083-33184542:+|nuORF'] 82143 24619 PNKECIWTI True H1975_Epitope_Rep2 1102.5481162329 1102.5470099358602 101.25 2 -1.8389241143259454 0.44681806728673 1.0 ['ENSG00000106333|ENST00000223061|PCOLCE', 'ENST00000496269.1_1_7:100200079-100202130:+|nuORF'] 8717 14466 AVARHQEHL True PC9_epitope_Rep6 1059.5573754769898 1059.5562699358602 67.531 2 -1.8391109592190384 0.4468301874390631 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 47618 7560 IVYLPVFFISE True NCI_RA007_Epitope_Rep5 1325.7271261406897 1325.72548490379 35.765 3 -1.8391151608577951 0.4468301874390631 1.0 ['ENST00000367210.2_2_1:203822500-203822629:+|nuORF'] 52568 23427 KLHKEKTRKE True PC9_epitope_Rep4 1295.7673682432298 1295.76571490379 98.398 3 -1.839246616871783 0.44685932125408057 1.0 ['nc|ENSG00000167258|Q9NYV4-2|CDK12', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'CDK12|p.L551Ffs*24|1|0.28|ENSG00000167258|chr17:39471481-39471482|-/T|frameshift_variant'] 55172 5843 LAAQEEKFA True PC9_epitope_Rep1 1005.5131106231698 1005.51200993586 27.29 2 -1.839400109374796 0.44685932125408057 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 32582 15320 GGGVTSGQ True NCI_RA007_Epitope_Rep2 661.3031178569299 661.30256496793 64.286 1 -1.8394552086667801 0.44685932125408057 1.0 ['ENST00000415783.6_1_2:70475644-70475788:-|nuORF'] 136522 5329 WWAPRHTP True PC9_epitope_Rep4 1049.51953341629 1049.51842993586 27.213 2 -1.8395143743099407 0.44686538061279263 1.0 ['ENST00000479481.5_1_10:99116853-99131081:-|nuORF'] 10289 20041 CCRGPLVKM True PC9_epitope_Rep2 1005.49219866325 1005.4916749679301 82.492 1 -1.8396526546663488 0.44688845315426834 1.0 ['ENSG00000176531|ENST00000292140|PHLDB3'] 120032 6319 VDSHYYRKVWD True NCI_RA007_Epitope_Rep5 1466.69426287262 1466.6931699358602 30.984 2 -1.8397944086721874 0.44688845315426834 1.0 ['ENSG00000138131|ENST00000260702|LOXL4'] 91193 18679 RGAVPRPS True NCI_RA007_Epitope_Rep2 838.4773342511401 838.47622993586 77.457 2 -1.8398288531891838 0.4468896167201586 1.0 ['ENST00000292377.3_1_7:99774686-99774926:-|nuORF'] 15326 9189 EAGAFQGG True NCI_RA007_Epitope_Rep3 735.3187679210698 735.3182149679301 43.238 1 -1.839874972415352 0.4468896167201586 1.0 ['nc|ENSG00000164144|P53367-2|ARFIP1'] 66461 8519 LSGSRHPSL True PC9_epitope_Rep4 952.50902830224 952.50792993586 40.245 2 -1.840156187314355 0.4469175831398151 1.0 ['ENST00000372903.6_1_6:42531844-42531958:+|nuORF'] 135045 12159 WDRVDIAK True PC9_epitope_Rep2 1001.5294293936498 1001.52832993586 52.081 2 -1.8402881221933032 0.4469345952044516 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5', 'nc|ENSG00000119121|Q9BX84-4|TRPM6', 'TRPM6|p.P1293Qfs*21|1|0.08|ENSG00000119121|chr9:74762793-74762793|G/-|frameshift_variant', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6', 'nc|ENSG00000119121|Q9BX84-6|TRPM6', 'nc|ENSG00000119121|Q9BX84-5|TRPM6', 'ENSG00000092439|ENST00000646667|TRPM7'] 11651 21814 DGNGAKRRR True PC9_epitope_Rep6 1028.55877245932 1028.55766993586 96.808 2 -1.8404377303534591 0.44696256051876354 1.0 ['ENST00000435680.5_1_15:31283038-31283785:-|nuORF'] 34183 7548 GNGGVLKN True H1975_Epitope_Rep3 757.40825163181 757.40714993586 34.015 2 -1.8409869098883627 0.4470075359270943 1.0 ['ST3GAL6|p.L300Dfs*3|1|0.03|ENSG00000064225|chr3:98791981-98791982|TT/-|frameshift_variant', 'ENSG00000064225|ENST00000483910|ST3GAL6'] 14044 18337 DRMGEAKAS True PC9_epitope_Rep6 963.44437944035 963.44383496793 83.175 1 -1.841046494458777 0.4470075359270943 1.0 ['nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-3|GPSM1'] 63933 11822 LNRSSKDVP True PC9_epitope_Rep2 1014.54580773378 1014.5447099358599 50.803 2 -1.8411373547781007 0.4470121790940156 1.0 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1'] 124080 24041 VGSLQHAR True PC9_epitope_Rep2 866.4722488706999 866.47170496793 97.977 1 -1.8411724217945322 0.4470121790940156 1.0 ['ENSG00000124194|ENST00000342560|GDAP1L1', 'nc|ENSG00000124194|Q96MZ0-4|GDAP1L1'] 18813 20940 ELDLASRSF True PC9_epitope_Rep2 1036.5189242796 1036.5178299358602 85.993 2 -1.841273199463474 0.4470121790940156 1.0 ['nc|ENSG00000153303|Q8N878-2|FRMD1', 'ENSG00000153303|ENST00000283309|FRMD1'] 92295 24453 RLLGPQTRP True H1975_Epitope_Rep1 1036.6141620771198 1036.61306993586 101.37 2 -1.8414748744750957 0.4470121790940156 1.0 ['ENST00000393599.2_1_19:10677298-10677478:-|nuORF'] 131402 1082 VTHNRTYHFQ True H1975_Epitope_Rep1 1301.6265176659701 1301.6248649037902 5.6504 3 -1.84162678406409 0.4470121790940156 1.0 ['ENSG00000088280|ENST00000336689|ASAP3', 'nc|ENSG00000088280|Q8TDY4-3|ASAP3'] 38794 23204 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 95.714 2 -1.8416504085430077 0.4470121790940156 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 9567 22122 AWKALMAA True PC9_epitope_Rep6 860.4578446765199 860.45674993586 98.034 2 -1.8417609722044066 0.4470121790940156 1.0 ['ENST00000263026.9_1_16:22217912-22237237:+|nuORF'] 127879 20296 VPGGIREE True NCI_RA007_Epitope_Rep1 855.4450310633499 855.4444849679301 83.155 1 -1.8417794465839956 0.4470121790940156 1.0 ['ENST00000591326.5_1_19:2078652-2090082:-|nuORF'] 59362 25036 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 108.21 2 -1.8419156168810116 0.44704014018947485 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 125983 10684 VLDPSSIVPL True H1975_Epitope_Rep1 1038.5961119711399 1038.5950099358602 46.055 2 -1.8420144442657378 0.4470424602175032 1.0 ['nc|ENSG00000144744|Q8TBC4-2|UBA3', 'ENSG00000144744|ENST00000361055|UBA3', 'ENST00000461522.1_1_3:69110938-69112631:-|nuORF'] 98828 18823 SGPSLKMP True H1975_Epitope_Rep2 815.42112481463 815.4205749679301 78.157 1 -1.8420216382048225 0.4470424602175032 1.0 ['ENSG00000124942|ENST00000378024|AHNAK'] 48777 24230 KDLHARPA True PC9_epitope_Rep4 906.5035489989799 906.50244993586 101.68 2 -1.8420410795301438 0.4470424602175032 1.0 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1'] 28711 19193 FSRQREKMERR True NCI_RA007_Epitope_Rep3 1521.7946627035697 1521.7935699358602 83.796 2 -1.8420513540798913 0.4470424602175032 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 64683 24964 LPVPKKSP True PC9_epitope_Rep3 864.54328855264 864.54218993586 101.37 2 -1.8421401249029905 0.4470485160442449 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-4|MAGI1', 'nc|ENSG00000151276|Q96QZ7-3|MAGI1', 'nc|ENSG00000151276|Q96QZ7-5|MAGI1'] 43143 5549 IFDMKKWDQFY True PC9_epitope_Rep3 1519.71697246315 1519.7153249037901 26.423 3 -1.8422608684796764 0.4470496758366918 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7', 'nc|ENSG00000156096|P06133-3|UGT2B4', 'nc|ENSG00000156096|P06133-2|UGT2B4', 'ENSG00000156096|ENST00000305107|UGT2B4'] 31730 12044 GEGSHSSR True H1975_Epitope_Rep1 815.3521933076701 815.35164496793 51.337 1 -1.8422700694857708 0.4470496758366918 1.0 ['ZBTB4|p.G750E|1|0.47|ENSG00000174282|chr17:7462733-7462733|C/T|missense_variant'] 91492 22956 RHSERVRAA True PC9_epitope_Rep4 1080.5900725876 1080.5889699358602 96.521 2 -1.8423014639461583 0.4470557313854544 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1'] 116116 17845 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 75.438 2 -1.842413654659304 0.44706178680158576 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 33321 20672 GKPRKDKA True PC9_epitope_Rep6 898.5348491272598 898.53374993586 92.273 2 -1.8428556466767776 0.44707621550591325 1.0 ['ENSG00000160801|ENST00000449590|PTH1R'] 3321 9191 AGGHRSLC True H1975_Epitope_Rep1 799.37590595771 799.37480993586 40.261 2 -1.8429065544130554 0.44707621550591325 1.0 ['ENST00000305963.2_1_X:135053232-135055898:-|nuORF'] 48735 21037 KDEDFKQYVNK True H1975_Epitope_Rep3 1412.6935941662798 1412.69248993586 87.865 2 -1.8429565917905602 0.44707621550591325 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 99086 19783 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 83.006 2 -1.843045842638655 0.44707621550591325 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 139758 23324 YPEHLPLE True NCI_RA007_Epitope_Rep5 996.4916469025999 996.49054993586 97.003 2 -1.8431032832817378 0.44707621550591325 1.0 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L', 'ENST00000565281.5_1_15:66585934-66615040:+|nuORF', 'ENST00000524795.5_1_15:66587446-66615029:+|nuORF'] 60923 2687 LIAMWKEGQSQ True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 14.386 3 -1.8431259785421872 0.44707621550591325 1.0 ['ENST00000505451.5_1_4:25314431-25353701:+|nuORF', 'nc|ENSG00000168228|Q9H5U6-3|ZCCHC4', 'ENSG00000168228|ENST00000302874|ZCCHC4'] 130572 12176 VSRRLSSL True NCI_RA007_Epitope_Rep3 916.54541381096 916.54430993586 55.019 2 -1.843349323181536 0.44708227023357167 1.0 ['ENST00000418609.5_1_4:186508297-186508507:-|nuORF', 'nc|ENSG00000138172|Q9HA72-3|CALHM2'] 81737 24815 PLPCSHPA True PC9_epitope_Rep3 820.39015903952 820.38906993586 100.83 2 -1.8434599495548254 0.4470992750925297 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 127460 17144 VNKDKGRP True NCI_RA007_Epitope_Rep5 912.5141136826799 912.5130099358599 72.716 2 -1.843676574772804 0.447100433620954 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 62913 24726 LLPCLHSA True PC9_epitope_Rep2 852.45275929608 852.45166993586 100.79 2 -1.8436935190206696 0.447100433620954 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 43517 7640 IGNINRAL True PC9_epitope_Rep4 869.5083000262499 869.50720993586 36.768 2 -1.843812562487337 0.4471064878182316 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.D726Mfs*17|1|0.17|ENSG00000158258|chr3:140562271-140562271|G/-|frameshift_variant'] 61950 7293 LLDLDGDPL True NCI_RA007_Epitope_Rep2 969.5018772331299 969.50078993586 32.989 2 -1.844000033470083 0.4471209118481129 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 81546 18583 PLKAKTASLF True NCI_RA007_Epitope_Rep4 1074.6437308698999 1074.6426299358602 80.388 2 -1.8440085989351231 0.4471209118481129 1.0 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 8973 22497 AVGHHISE True PC9_epitope_Rep6 848.4140652882401 848.41296993586 99.534 2 -1.8442574548606885 0.4471209118481129 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 17064 18589 EGGVSCVE True PC9_epitope_Rep5 778.31671931574 778.31617496793 76.527 1 -1.8442778583304777 0.4471209118481129 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant'] 19841 12162 ELSTKWFK True H1975_Epitope_Rep2 1037.5545815123298 1037.5534899358602 51.866 2 -1.8442912251620898 0.4471209118481129 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 84113 23070 PWSLTWHKD True PC9_epitope_Rep6 1168.5665431783598 1168.5654499358602 101.84 2 -1.8443043884976325 0.4471209118481129 1.0 ['ENST00000370251.3_2_X:152610995-152612303:+|nuORF'] 109444 8620 TDIPVNFPK True H1975_Epitope_Rep1 1029.54949613189 1029.54838993586 38.084 2 -1.8450764760783662 0.4471607019694996 1.0 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC'] 29583 25978 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 108.21 3 -1.8450783064480647 0.4471607019694996 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 89805 14986 RALLKRRRSDS True NCI_RA007_Epitope_Rep5 1356.80621336344 1356.8051099358602 64.312 2 -1.845172521204142 0.4471607019694996 1.0 ['ENSG00000163904|ENST00000296257|SENP2'] 94827 9860 RSRRYYREQRF True H1975_Epitope_Rep3 1615.8443897773097 1615.8432899358602 42.956 2 -1.8451903404316552 0.4471607019694996 1.0 ['nc|ENSG00000181355|Q8IZS5|OFCC1', 'nc|ENSG00000181355|Q8IZS5-2|OFCC1'] 129007 15372 VQLLGLAV True NCI_RA007_Epitope_Rep4 811.51673945163 811.51564993586 66.802 2 -1.8452338186968271 0.4471607019694996 1.0 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 110810 18831 TGLPKPAI True PC9_epitope_Rep5 795.48543932335 795.48434993586 77.448 2 -1.845244719603045 0.4471607019694996 1.0 ['nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5'] 61716 24927 LLAALTAYK True PC9_epitope_Rep2 962.5800679841799 962.57896993586 101.55 2 -1.8452665840636018 0.4471607019694996 1.0 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'ENST00000496816.5_1_20:62325699-62327208:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-5|RTEL1', 'ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 16312 6180 EEGIEEQVLK True NCI_RA007_Epitope_Rep2 1172.5924831426798 1172.5913899358602 28.645 2 -1.845270342006384 0.4471607019694996 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-3|STON1'] 47623 22246 IVYLYTKKV True NCI_RA007_Epitope_Rep4 1125.6797820254499 1125.6781349037901 96.504 3 -1.8453629763309356 0.4471607019694996 1.0 ['ENST00000503574.1_1_4:109543115-109543474:+|nuORF', 'ENSG00000109475|ENST00000394667|RPL34'] 36364 7510 GVFASRSSL True NCI_RA007_Epitope_Rep3 922.4872302285 922.48612993586 36.666 2 -1.8454432782804613 0.4471607019694996 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000563874.5_2_16:28488839-28493793:-|nuORF', 'ENST00000565140.5_3_16:28489128-28499933:-|nuORF', 'ENST00000561689.6_2_16:28488839-28493686:-|nuORF', 'nc|ENSG00000261832|Q13286-5|CLN3'] 91871 24830 RKKPLLSSH True NCI_RA007_Epitope_Rep5 1064.6454622054 1064.64487496793 103.0 1 -1.845459048921978 0.4471607019694996 1.0 ['ENST00000552187.1_1_12:48358077-48358221:+|nuORF', 'ENST00000429772.6_1_12:48357429-48359073:+|nuORF'] 127301 5084 VMDSFLTMMVP True NCI_RA007_Epitope_Rep3 1269.5807388841301 1269.57910490379 26.991 3 -1.8455107511777937 0.4471607019694996 1.0 ['ENSG00000125531|ENST00000370097|FNDC11'] 43553 13015 IGRKNTFTD True PC9_epitope_Rep6 1050.54580773378 1050.54470993586 61.643 2 -1.8457489976629415 0.4471615911728003 1.0 ['nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B', 'nc|ENSG00000138709|Q659C4-4|LARP1B'] 128966 16369 VQISLPQA True PC9_epitope_Rep6 854.4861675993399 854.48506993586 75.348 2 -1.8457648184446924 0.4471615911728003 1.0 ['TSC1|p.H408Q|1|0.21|ENSG00000165699|chr9:132910610-132910610|G/T|missense_variant'] 44581 21357 ILPSLRPEL True PC9_epitope_Rep2 1036.62808080576 1036.6269899358601 87.618 2 -1.8458522030053706 0.4471615911728003 1.0 ['nc|ENSG00000021574|Q9UBP0-4|SPAST', 'nc|ENSG00000021574|Q9UBP0-3|SPAST', 'nc|ENSG00000021574|Q9UBP0-2|SPAST', 'ENSG00000021574|ENST00000315285|SPAST'] 132728 22395 VVHSVLVM True PC9_epitope_Rep4 882.4997094885 882.49860993586 94.376 2 -1.8458797817740138 0.4471615911728003 1.0 ['ENST00000569839.1_1_16:57608733-57625590:+|nuORF', 'ENSG00000159618|ENST00000349457|ADGRG5'] 120284 14088 VEDLHRRR True H1975_Epitope_Rep1 1079.59482361487 1079.5937299358602 59.356 2 -1.8459769595096607 0.4471615911728003 1.0 ['ENST00000372045.5_1_X:109919510-109919585:-|nuORF'] 133051 25748 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 109.01 2 -1.8461760832601695 0.4471615911728003 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 136301 5517 WSMVFWLTY True H1975_Epitope_Rep3 1231.5736027047499 1231.5719549037901 26.269 3 -1.8462773960736332 0.4471615911728003 1.0 ['ENSG00000153291|ENST00000371347|SLC25A27'] 60199 24205 LGPLGSWQQWR True PC9_epitope_Rep2 1326.6833042660999 1326.6827749679298 98.639 1 -1.8464232108376641 0.4471615911728003 1.0 ['ENSG00000114988|ENST00000264963|LMAN2L', 'nc|ENSG00000114988|Q9H0V9-2|LMAN2L'] 16831 19960 EEYIREQIDWQ True H1975_Epitope_Rep1 1507.6943224422698 1507.69322993586 83.076 2 -1.84643023262462 0.4471615911728003 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'MYO15A|p.L1791Cfs*6|1|0.26|ENSG00000091536|chr17:18140793-18140793|C/-|frameshift_variant'] 42700 15333 IEKKGGGG True H1975_Epitope_Rep2 744.4130026590798 744.4124549679301 64.136 1 -1.846448238356261 0.4471615911728003 1.0 ['ENSG00000150594|ENST00000280155|ADRA2A'] 32470 23430 GGASKWPV True PC9_epitope_Rep3 800.4180880395198 800.41698993586 95.4 2 -1.846460162576649 0.4471615911728003 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 53489 25013 KRIKQLHH True PC9_epitope_Rep3 1058.64613091174 1058.64502993586 101.56 2 -1.8465632329587964 0.4471676427124952 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000431453.1_1_7:6777424-6779847:+|nuORF', 'ENST00000486256.5_1_7:6777424-6791020:+|nuORF'] 18061 20359 EIGFGSKTRSI True PC9_epitope_Rep2 1193.6404363946099 1193.6393299358601 83.733 2 -1.846787942946857 0.4471797453944416 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3', 'nc|ENSG00000080200|Q68DQ2-1|CRYBG3'] 3374 19725 AGHGTPEP True PC9_epitope_Rep3 764.3453170220799 764.34420993586 81.1 2 -1.8468558537272008 0.4471797453944416 1.0 ['ENST00000594213.5_1_19:6380294-6381826:-|nuORF'] 28428 22171 FSDCLAHL True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 92.422 2 -1.8469465121795063 0.44718579653670176 1.0 ['HBB|p.G75C|1|0.37|ENSG00000244734|chr11:5226669-5226669|C/A|missense_variant'] 109350 6650 TCESIPEELQ True NCI_RA007_Epitope_Rep2 1147.50670491339 1147.50560993586 30.477 2 -1.8472045960715426 0.44719789842381785 1.0 ['CNTN6|p.W721C|1|0.05|ENSG00000134115|chr3:1377072-1377072|G/T|missense_variant'] 81109 6350 PKANGQNQAS True NCI_RA007_Epitope_Rep5 1013.48902113365 1013.4884749679301 31.1 1 -1.8472941699615015 0.44719789842381785 1.0 ['ENSG00000099381|ENST00000262519|SETD1A'] 133054 25942 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 110.02 2 -1.847449762686788 0.4471990543114205 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 10853 21124 CVGMGMLA True NCI_RA007_Epitope_Rep3 780.33323841036 780.33214993586 91.875 2 -1.8475230685791424 0.4471990543114205 1.0 ['ENST00000497497.1_1_10:119013719-119036774:+|nuORF'] 82633 17965 PQKRWDGP True PC9_epitope_Rep1 982.4984636185397 982.49736993586 73.895 2 -1.8476131655382302 0.4472002101484173 1.0 ['ENST00000006777.10_1_7:75518025-75518175:+|nuORF'] 18442 22539 EIYKYKRLQY True PC9_epitope_Rep3 1402.7608858804601 1402.75978993586 91.968 2 -1.8476521012297364 0.4472002101484173 1.0 ['ENST00000343776.9_1_1:227843645-227843831:+|nuORF'] 27137 7843 FLIWWHWYNHT True NCI_RA007_Epitope_Rep2 1601.75680355953 1601.7551549037898 35.136 3 -1.8477357898696134 0.4472036773558061 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 90117 3087 REARQAMIYHW True PC9_epitope_Rep3 1459.7142871245499 1459.71265490379 16.831 3 -1.8477552412728155 0.4472036773558061 1.0 ['ENSG00000167216|ENST00000683218|KATNAL2', 'nc|ENSG00000167216|Q8IYT4-2|KATNAL2'] 95031 16113 RTRRSIFENLM True H1975_Epitope_Rep1 1421.7561519365297 1421.7550499358601 67.322 2 -1.8477582796506726 0.4472036773558061 1.0 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 15774 8987 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 39.474 2 -1.8477931986110232 0.4472036773558061 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 94631 19352 RRVQKQLEVI True NCI_RA007_Epitope_Rep4 1267.7724536236697 1267.7707949037901 83.694 3 -1.8478657806016692 0.4472036773558061 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B', 'ENST00000251181.8_1_14:105360511-105361292:+|nuORF'] 15782 9152 EDAERREREER True NCI_RA007_Epitope_Rep2 1473.6920310264902 1473.6909299358601 40.206 2 -1.8478911606881632 0.4472036773558061 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 27222 14356 FLNWFDERAWY True NCI_RA007_Epitope_Rep1 1545.70409928033 1545.70300993586 59.882 2 -1.8481413057307428 0.447207144107862 1.0 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 33317 22952 GKPNKRRGF True PC9_epitope_Rep4 1058.6097454030198 1058.60864993586 96.505 2 -1.848162076831237 0.447207144107862 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 99055 12678 SHGCAPTT True NCI_RA007_Epitope_Rep5 772.3173880220801 772.31628993586 55.424 2 -1.8482546158127842 0.447207144107862 1.0 ['nc|ENSG00000185988|Q496M5-2|PLK5', 'ENSG00000185988|ENST00000454744|PLK5'] 49127 18766 KEKIREERRNK True NCI_RA007_Epitope_Rep5 1484.8535574786795 1484.8524699358602 79.016 2 -1.8482620483558665 0.447207144107862 1.0 ['ENSG00000206530|ENST00000393845|CFAP44', 'nc|ENSG00000206530|Q96MT7-1|CFAP44'] 82584 15391 PPYGAGYP True NCI_RA007_Epitope_Rep5 820.3755545212 820.37444993586 65.902 2 -1.848334206834993 0.447207144107862 1.0 ['SMR3A|p.P100A|1|0.47|ENSG00000109208|chr4:70366887-70366887|C/G|missense_variant'] 4610 18069 AKWYNQNRTLT True H1975_Epitope_Rep1 1393.7102472899298 1393.70914993586 75.286 2 -1.8483621849044636 0.447207144107862 1.0 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF'] 84736 7397 QDSFHEDGS True NCI_RA007_Epitope_Rep3 1020.3784676251599 1020.37736993586 36.221 2 -1.8483930532991453 0.4472131936920669 1.0 ['ENSG00000174576|ENST00000311034|NPAS4'] 91216 23482 RGDQGIES True H1975_Epitope_Rep3 860.3988091469199 860.39770993586 97.992 2 -1.8487639687074813 0.4472581227634358 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 81273 13656 PKVAIIITDGK True NCI_RA007_Epitope_Rep2 1153.7070594024499 1153.7059699358601 57.76 2 -1.8488266455059832 0.4472581227634358 1.0 ['COL12A1|p.K2873Sfs*16|1|0.34|ENSG00000111799|chr6:75095141-75095141|C/-|frameshift_variant', 'ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 82730 23741 PREVGGQG True NCI_RA007_Epitope_Rep5 798.3984152240998 798.39730993586 98.664 2 -1.8489715644261846 0.4472641715911578 1.0 ['ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2'] 60489 24939 LHAAAAAA True PC9_epitope_Rep5 694.37622322754 694.3756749679301 101.1 1 -1.849182046982883 0.4472702202864928 1.0 ['ENSG00000125816|ENST00000351817|NKX2-4', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 113845 21755 TNGAIRTTTY True PC9_epitope_Rep6 1096.55128703704 1096.55018993586 96.573 2 -1.8493224978115066 0.4472932602343981 1.0 ['ENSG00000080298|ENST00000617270|RFX3', 'nc|ENSG00000080298|P48380-3|RFX3', 'nc|ENSG00000080298|P48380-2|RFX3'] 61476 25762 LKAKKPQKRKP True PC9_epitope_Rep4 1320.8717737421198 1320.8701349037901 108.56 3 -1.8493347859485318 0.4472932602343981 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 128184 22459 VPLTTRGR True PC9_epitope_Rep5 898.5348491272599 898.53374993586 91.391 2 -1.8495319228358016 0.4473036400039387 1.0 ['ENST00000504162.1_1_1:205498135-205498558:+|nuORF'] 61871 22771 LLCRPGWSIVA True PC9_epitope_Rep6 1213.6641490446502 1213.66304993586 100.68 2 -1.8497754165883389 0.4473036400039387 1.0 ['ENST00000452360.6_1_4:942397-950358:+|nuORF'] 59935 7030 LGGRHPLHHE True NCI_RA007_Epitope_Rep4 1151.59482361487 1151.5937299358602 33.667 2 -1.849775717940651 0.4473036400039387 1.0 ['ENST00000548086.1_12:52174024-52180420:+|nuORF', 'ENST00000545061.1_12:52168115-52180420:+|nuORF'] 43394 9016 IGDVKVRTL True PC9_epitope_Rep5 999.60767971435 999.60658993586 39.625 2 -1.849789201484707 0.4473036400039387 1.0 ['ENST00000477109.1_1_X:53226904-53227733:-|nuORF'] 39349 22899 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 95.302 3 -1.8498109883865737 0.4473036400039387 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 20410 23003 EPDLKWKIKL True PC9_epitope_Rep3 1268.7492585675998 1268.74816993586 93.748 2 -1.8498464679487798 0.4473036400039387 1.0 ['ENST00000347053.7_1_7:107052966-107053029:-|nuORF'] 133536 24246 VWRLLSHQA True PC9_epitope_Rep4 1108.61416207712 1108.61306993586 101.74 2 -1.8500071601701638 0.4473036400039387 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD'] 61750 25461 LLAFAKNL True PC9_epitope_Rep5 888.54328855264 888.54218993586 103.17 2 -1.8501258316707958 0.4473036400039387 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 62165 7800 LLELSEPAP True NCI_RA007_Epitope_Rep2 967.5226126777098 967.52150993586 34.968 2 -1.8503376494632569 0.4473036400039387 1.0 ['nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'nc|ENSG00000130856|Q9UL36-2|ZNF236'] 104456 23574 SQLLLPLPAC True PC9_epitope_Rep5 1053.58925276889 1053.5881499358602 95.662 2 -1.8504471882680091 0.4473036400039387 1.0 ['ENST00000519574.1_1_2:219125758-219128073:+|nuORF'] 104472 22578 SQLQRPPEA True PC9_epitope_Rep5 1024.5301576696397 1024.5290699358602 91.846 2 -1.8505572826775916 0.4473036400039387 1.0 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 136345 16620 WTEGKAAA True NCI_RA007_Epitope_Rep3 832.4079172786397 832.40682993586 73.156 2 -1.8506249669618342 0.4473036400039387 1.0 ['ENST00000515867.1_1_3:126668128-126668617:+|nuORF'] 123013 24594 VGIIGGGH True PC9_epitope_Rep3 708.39187329168 708.39132496793 99.963 1 -1.8506275334102187 0.4473036400039387 1.0 ['nc|ENSG00000165555|Q6NXP6-2|NOXRED1', 'ENSG00000165555|ENST00000380835|NOXRED1'] 111995 9848 TIRLIYFKNKM True NCI_RA007_Epitope_Rep1 1425.8166269347696 1425.81552993586 42.308 2 -1.850629031231232 0.4473036400039387 1.0 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 18527 9068 EKKERHRR True H1975_Epitope_Rep1 1137.64792181689 1137.64682993586 39.787 2 -1.8506447769878402 0.4473036400039387 1.0 ['ENST00000471215.1_1_7:73111917-73112213:+|nuORF', 'ENST00000463307.5_1_7:73107559-73112213:+|nuORF', 'ENST00000436944.5_1_7:73101164-73117856:+|nuORF', 'ENSG00000071462|ENST00000265758|BUD23', 'nc|ENSG00000071462|O43709-3|BUD23'] 116158 10786 TSTSASWPR True PC9_epitope_Rep4 991.4723084403499 991.47120993586 49.247 2 -1.8507420046815797 0.4473036400039387 1.0 ['POLG|p.Q90Kfs*176|1|0.05|ENSG00000140521|chr15:89333487-89333487|G/-|frameshift_variant'] 73122 24790 MRLVLHSMTPA True H1975_Epitope_Rep2 1254.6576837652199 1254.65602490379 101.92 3 -1.8508817233743222 0.4473036400039387 1.0 ['ENST00000454784.8_2_12:40959567-40961472:+|nuORF'] 3633 7399 AGPKGQPV True H1975_Epitope_Rep3 752.4180880395198 752.41753496793 33.439 1 -1.8509666921895611 0.4473036400039387 1.0 ['COL21A1|p.G770V|1|0.29|ENSG00000124749|chr6:56060934-56060934|C/A|missense_variant'] 32715 22814 GGVGDPRGM True NCI_RA007_Epitope_Rep5 844.38613628824 844.38502993586 94.966 2 -1.8511208342711065 0.4473206275573839 1.0 ['ENST00000264220.6_1_4:57273852-57301749:-|nuORF'] 127623 23510 VPAAAPAH True NCI_RA007_Epitope_Rep5 732.39187329168 732.39132496793 97.743 1 -1.851149905856251 0.4473217802284364 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B', 'KIF26B|p.A1114Vfs*2|1|0.6|ENSG00000162849|chr1:245686323-245686324|GC/-|frameshift_variant'] 97035 17467 SCQTNNKYRN True PC9_epitope_Rep1 1226.5462187399398 1226.54458490379 71.984 3 -1.8511620710377046 0.4473217802284364 1.0 ['PCDH7|p.S1056Rfs*71|1|0.13|ENSG00000169851|chr4:30724590-30724590|C/-|frameshift_variant'] 128612 15472 VPTVPVKN True PC9_epitope_Rep6 852.50690304392 852.5063549679301 71.685 1 -1.8514900349291143 0.4473338730499092 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 124317 7016 VGTPVVLAQ True PC9_epitope_Rep4 882.51746772762 882.51636993586 34.234 2 -1.8515080650740545 0.4473338730499092 1.0 ['ENST00000500813.6_1_4:183811817-183811883:-|nuORF'] 52548 23677 KLFRRICINFL True PC9_epitope_Rep5 1421.8329457052498 1421.83129490379 96.052 3 -1.8516960172651185 0.44735201128991675 1.0 ['LIPK|p.S256I|1|0.32|ENSG00000204021|chr10:88737732-88737732|G/T|missense_variant'] 40621 17285 HRLHLAVVD True PC9_epitope_Rep4 1058.5985120129799 1058.59740993586 74.49 2 -1.8516960699931164 0.44735201128991675 1.0 ['ZNF862|p.I1034Sfs*13|1|0.16|ENSG00000106479|chr7:149862257-149862257|C/-|frameshift_variant', 'ENSG00000106479|ENST00000223210|ZNF862'] 13601 22540 DPGLRGPLHW True NCI_RA007_Epitope_Rep3 1146.5934266325398 1146.59179490379 97.977 3 -1.8517263625865246 0.44735201128991675 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 13604 25067 DPGLRGPLHW True PC9_epitope_Rep3 1146.5934266325398 1146.59179490379 101.77 3 -1.8518718033759893 0.44739317828778963 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 36213 15930 GVCQGWHC True NCI_RA007_Epitope_Rep3 888.3370779208399 888.33598993586 70.32 2 -1.8519529410519944 0.44739317828778963 1.0 ['nc|ENSG00000196668|Q6ZV60|LINC00173'] 112686 12967 TLGEIPTLVF True PC9_epitope_Rep6 1088.61176203528 1088.6106699358602 61.438 2 -1.8521212676705967 0.44739317828778963 1.0 ['KIAA0232|p.G888Dfs*33|1|0.26|ENSG00000170871|chr4:6863043-6863043|G/-|frameshift_variant', 'ENSG00000170871|ENST00000307659|KIAA0232'] 20261 21582 ENNVLSPFAVP True PC9_epitope_Rep1 1185.60298825673 1185.60188993586 87.838 2 -1.8521340664929085 0.44739317828778963 1.0 ['TP53|p.L35Ffs*8|1|0.33|ENSG00000141510|chr17:7676264-7676265|-/A|frameshift_variant'] 127625 25036 VPAAAPAH True PC9_epitope_Rep5 732.39187329168 732.39132496793 101.44 1 -1.8522086521965406 0.44739317828778963 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B', 'KIF26B|p.A1114Vfs*2|1|0.6|ENSG00000162849|chr1:245686323-245686324|GC/-|frameshift_variant'] 114184 14162 TPLEEVVKV True PC9_epitope_Rep6 1012.5804619069999 1012.57936993586 66.347 2 -1.8523059333714158 0.4473992233222119 1.0 ['nc|ENSG00000186510|P51800-2|CLCNKA', 'nc|ENSG00000186510|P51800-3|CLCNKA', 'ENSG00000186510|ENST00000331433|CLCNKA'] 82765 22550 PRLPRSTT True PC9_epitope_Rep4 926.5297637468201 926.52866993586 94.977 2 -1.852654834002639 0.4474162072284939 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 23812 24342 EYHTRWYFKYF True PC9_epitope_Rep5 1638.76194850962 1638.76084993586 98.666 2 -1.8529069262529554 0.4474173576319762 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3', 'GARNL3|p.M654Wfs*2|1|0.42|ENSG00000136895|chr9:127357240-127357240|C/-|frameshift_variant'] 40633 16754 HRLRQRGLW True NCI_RA007_Epitope_Rep5 1220.70029174292 1220.6991899358602 71.207 2 -1.8529519866069424 0.4474173576319762 1.0 ['ENST00000528797.5_1_11:57413095-57413371:-|nuORF'] 27246 7324 FLPPAPAA True NCI_RA007_Epitope_Rep2 782.4326754744999 782.43156993586 33.111 2 -1.852963531649484 0.4474234021374113 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 121893 5667 VFQGTLAA True NCI_RA007_Epitope_Rep5 805.4334037504898 805.43230993586 28.486 2 -1.8531423578248698 0.44743549075157785 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'RNF213|p.A949Rfs*39|1|0.23|ENSG00000173821|chr17:80317221-80317221|G/-|frameshift_variant', 'nc|ENSG00000173821|Q63HN8-5|RNF213'] 70451 3632 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 18.381 3 -1.8532048137964885 0.44743549075157785 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 136363 27207 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 112.41 2 -1.853433361124202 0.4474585170033799 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 65277 18253 LQVMINLL True NCI_RA007_Epitope_Rep5 942.55722436462 942.55612993586 77.019 2 -1.8534646751663624 0.4474585170033799 1.0 ['nc|ENSG00000084112|Q8WYL5-2|SSH1', 'nc|ENSG00000084112|Q8WYL5-5|SSH1', 'ENSG00000084112|ENST00000326495|SSH1'] 82115 22313 PNAKKRHGVI True PC9_epitope_Rep6 1118.66726027914 1118.6661699358601 98.798 2 -1.853654509067385 0.4474645607280364 1.0 ['nc|ENSG00000143479|O43781-2|DYRK3', 'ENSG00000143479|ENST00000367109|DYRK3'] 89707 14736 RAAKTVAH True H1975_Epitope_Rep2 852.49298431528 852.49188993586 61.843 2 -1.8537315517750343 0.44748154224774406 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 45745 6063 ISAADRLEA True H1975_Epitope_Rep2 944.4927095317599 944.49160993586 28.299 2 -1.8537617474608783 0.44748758558834467 1.0 ['ENSG00000114491|ENST00000232607|UMPS', 'nc|ENSG00000114491|P11172-4|UMPS', 'nc|ENSG00000114491|P11172-2|UMPS', 'nc|ENSG00000114491|P11172-3|UMPS'] 55471 4267 LAGASPLH True NCI_RA007_Epitope_Rep5 764.4180880395202 764.41698993586 22.986 2 -1.853881473717597 0.4474936287967449 1.0 ['ENST00000360121.4_1_16:29677771-29678056:+|nuORF'] 98002 5706 SEQAHLLSLTD True NCI_RA007_Epitope_Rep2 1212.59863115228 1212.5975299358602 26.81 2 -1.854038300550309 0.4474996718729492 1.0 ['ENST00000446877.5_2_2:190649358-190650191:+|nuORF'] 110797 6607 TGKCYHTFRGY True H1975_Epitope_Rep1 1331.6080907205098 1331.6069899358602 30.47 2 -1.854173100571051 0.44750686309894894 1.0 ['DAW1|p.H176Y|1|0.16|ENSG00000123977|chr2:227898267-227898267|C/T|missense_variant'] 86283 16041 QIRSQVALMQ True PC9_epitope_Rep3 1172.6335771923598 1172.63194490379 66.851 3 -1.8542210696983812 0.44750686309894894 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3', 'SALL3|p.L652Cfs*2|1|0.52|ENSG00000256463|chr18:78993939-78993939|G/-|frameshift_variant'] 132551 18852 VVDTVLAL True NCI_RA007_Epitope_Rep4 828.4956696538799 828.49456993586 81.538 2 -1.8542257114086826 0.44750686309894894 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 78986 19095 PAKQVSIHN True NCI_RA007_Epitope_Rep4 992.5403284305199 992.53977496793 82.598 1 -1.8543266315552804 0.447531032974244 1.0 ['ENSG00000173250|ENST00000311104|GPR151'] 126320 12073 VLIHAKDMGGQ True NCI_RA007_Epitope_Rep2 1167.6070280913498 1167.60592993586 51.553 2 -1.8544534502102255 0.447531032974244 1.0 ['CDH12|p.Q238H|1|0.17|ENSG00000154162|chr5:21842261-21842261|T/A|missense_variant'] 78251 11836 NYHCWNEAW True H1975_Epitope_Rep1 1221.46617751409 1221.46508993586 50.524 2 -1.8544962768809108 0.447531032974244 1.0 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.E693Kfs*14|1|0.45|ENSG00000124491|chr6:6145741-6145741|C/-|frameshift_variant'] 131368 9642 VTGVYTGA True H1975_Epitope_Rep2 766.3861192048998 766.38502993586 42.066 2 -1.8545846043743188 0.447531032974244 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 52428 18177 KKRRHLTPT True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6927099358602 79.619 2 -1.8546304785527794 0.4475370751126471 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 127905 22581 VPGRRASL True PC9_epitope_Rep4 854.50863437942 854.50808496793 95.091 1 -1.8549060634532015 0.4475442644823325 1.0 ['nc|ENSG00000092871|Q8WZ73-3|RFFL', 'nc|ENSG00000092871|Q8WZ73-2|RFFL', 'ENSG00000092871|ENST00000394597|RFFL'] 87330 21974 QPRVQRPRPRR True PC9_epitope_Rep5 1444.8599802717997 1444.8588899358601 89.555 2 -1.8550297470096875 0.4475442644823325 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 129146 14681 VQRFPTTYFI True H1975_Epitope_Rep1 1270.6710082468996 1270.66990993586 61.686 2 -1.8550484591519592 0.4475442644823325 1.0 ['nc|ENSG00000239605|Q8N801-2|STPG4', 'ENSG00000239605|ENST00000445927|STPG4'] 10856 17001 CVKIKKCIIM True NCI_RA007_Epitope_Rep4 1177.67491405249 1177.6738099358602 73.672 2 -1.8551647125720505 0.4475574948328467 1.0 ['nc|ENSG00000133703|P01116|KRAS'] 112352 12482 TLAGAQSHG True NCI_RA007_Epitope_Rep2 840.4089799078001 840.40843496793 53.163 1 -1.855219537470428 0.4475574948328467 1.0 ['ENSG00000162992|ENST00000295108|NEUROD1'] 29744 11129 FVNDSLQQV True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 47.903 2 -1.8552524686402214 0.4475574948328467 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1'] 7726 7977 ASPAMLGNV True PC9_epitope_Rep1 858.42693847106 858.42584993586 35.506 2 -1.855258302271615 0.4475574948328467 1.0 ['ENSG00000116128|ENST00000234739|BCL9'] 49611 11488 KGCNGHAG True NCI_RA007_Epitope_Rep5 742.31805672842 742.3175049679301 50.838 1 -1.8553941757625847 0.44755864180655036 1.0 ['EXPH5|p.D150N|1|0.06|ENSG00000110723|chr11:108528180-108528180|C/T|missense_variant'] 119465 25772 VARKGGGL True PC9_epitope_Rep2 756.4606215578398 756.46007496793 104.86 1 -1.8554716734245569 0.44755864180655036 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 36837 16833 GVLGWGAP True PC9_epitope_Rep5 755.3966243189499 755.3955299358599 69.757 2 -1.855598858329771 0.4475597887300841 1.0 ['ENSG00000159618|ENST00000349457|ADGRG5'] 72922 5810 MPWFFLWHLKK True NCI_RA007_Epitope_Rep5 1531.8162330119496 1531.81401987172 29.033 4 -1.8556521799858188 0.4475597887300841 1.0 ['ENST00000342922.8_1_11:47290950-47291097:+|nuORF'] 135189 25201 WERFRLSRRR True PC9_epitope_Rep2 1460.8225321339198 1460.82088490379 102.6 3 -1.8559601088748228 0.44758280571684766 1.0 ['ENSG00000225968|ENST00000424383|ELFN1'] 60485 21596 LHAAAAAA True NCI_RA007_Epitope_Rep3 694.37622322754 694.3756749679301 93.85 1 -1.8559799563917077 0.44758280571684766 1.0 ['ENSG00000125816|ENST00000351817|NKX2-4', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 101671 12087 SLLVRASVDP True H1975_Epitope_Rep1 1055.59750895347 1055.59697496793 51.506 1 -1.8561555229805695 0.44758884636413343 1.0 ['ENSG00000164366|ENST00000296824|CCDC127'] 21284 13116 ERDVVIRLM True PC9_epitope_Rep5 1129.62776353593 1129.62610490379 55.455 3 -1.8562040676934564 0.44761675651441757 1.0 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 52480 24785 KKVKMATK True PC9_epitope_Rep3 932.5841078187999 932.58355496793 100.71 1 -1.8565447522154142 0.4476774701482745 1.0 ['nc|nan|Q6PH81-2|C16orf87', 'ENSG00000155330|ENST00000285697|C16orf87'] 93501 20928 RQKQNKYPI True NCI_RA007_Epitope_Rep5 1173.66184054553 1173.66019490379 87.5 3 -1.856560871898747 0.4476835095622888 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1'] 169 14151 AADRYITI True PC9_epitope_Rep3 921.4919812557699 921.49088993586 59.515 2 -1.8567810966992928 0.4476895488442277 1.0 ['ENSG00000185231|ENST00000327606|MC2R'] 28713 20020 FSRQREKMERR True NCI_RA007_Epitope_Rep5 1521.7946627035697 1521.7935699358602 83.925 2 -1.8573095756886016 0.4477721283691433 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 33375 10583 GKYDSLIQDQA True H1975_Epitope_Rep1 1236.59863115228 1236.5975299358602 45.662 2 -1.8574973553992682 0.44780003498950316 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 129414 20674 VRFLSGRA True NCI_RA007_Epitope_Rep1 904.5242844435598 904.52318993586 84.643 2 -1.8576211927424304 0.447806072799239 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2', 'ENST00000475900.1_1_2:29256310-29268401:+|nuORF'] 47454 12646 IVNKFREY True H1975_Epitope_Rep1 1067.5763795860698 1067.5752899358602 53.696 2 -1.8578148135031483 0.4478181480226112 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000466614.1_1_22:30983271-30987820:-|nuORF'] 9007 2695 AVGQQKELP True PC9_epitope_Rep1 968.5290950404798 968.52798993586 14.789 2 -1.8578331684481195 0.4478181480226112 1.0 ['ENSG00000006062|ENST00000344686|MAP3K14'] 133230 7701 VVSRTGHSL True PC9_epitope_Rep5 954.5246783663799 954.52358993586 34.565 2 -1.8581905969281811 0.447846052919309 1.0 ['ENSG00000008869|ENST00000233099|HEATR5B', 'HEATR5B|p.A1299Hfs*39|1|0.5|ENSG00000008869|chr2:37020795-37020795|C/-|frameshift_variant', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'ENST00000467978.1_1_2:37268272-37283611:-|nuORF'] 81730 14828 PLPALHSGR True PC9_epitope_Rep1 946.53484912726 946.53374993586 61.855 2 -1.8582466150652341 0.44786302358382263 1.0 ['ENST00000329875.12_1_17:79890528-79890927:-|nuORF'] 70439 1812 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 9.4102 3 -1.8585243120121577 0.44788227319441104 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 61599 17921 LKKYHAIA True NCI_RA007_Epitope_Rep3 942.56508662638 942.56398993586 78.527 2 -1.8585272717260894 0.44788227319441104 1.0 ['ERLIN1|p.Q289H|1|0.56|ENSG00000107566|chr10:100152311-100152311|C/A|missense_variant'] 135323 24242 WGFSTLSR True PC9_epitope_Rep4 952.4766655448 952.47556993586 101.73 2 -1.8586386054779487 0.44788227319441104 1.0 ['ENST00000552521.5_1_12:44198371-44200048:-|nuORF'] 90056 4296 RDYVMRMKEFE True NCI_RA007_Epitope_Rep2 1502.7010051291797 1502.69935490379 21.349 3 -1.8586938615106101 0.44788227319441104 1.0 ['ENSG00000099795|ENST00000215565|NDUFB7', 'ENST00000593353.5_1_19:14676947-14682853:-|nuORF'] 54163 24085 KVRHLRHP True H1975_Epitope_Rep2 1041.63081520077 1041.62970993586 99.176 2 -1.858760602940503 0.44788227319441104 1.0 ['ENSG00000239810|ENST00000619922|PRAMEF11'] 93579 6584 RQLWWYHWICW True NCI_RA007_Epitope_Rep2 1675.78705814199 1675.78540490379 30.222 3 -1.8587912283588632 0.4478834127782394 1.0 ['SGMS1|p.R303Q|1|0.26|ENSG00000198964|chr10:50308136-50308136|C/T|missense_variant'] 88139 15202 QRSHTKEKPYK True NCI_RA007_Epitope_Rep1 1400.75244645508 1400.7513499358602 63.203 2 -1.8588267083377459 0.4478834127782394 1.0 ['ENSG00000197937|ENST00000334197|ZNF347', 'nc|ENSG00000197937|Q96SE7-2|ZNF347'] 61468 22543 LKAISRKFM True H1975_Epitope_Rep2 1092.6477707045199 1092.64666993586 93.14 2 -1.859219759435988 0.44799501486793775 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 104564 23923 SQQGLAEI True PC9_epitope_Rep2 844.4290466460399 844.4279499358599 97.499 2 -1.8593973038369527 0.44799501486793775 1.0 ['ENSG00000144771|ENST00000273286|LRTM1', 'LRTM1|p.H47N|1|0.14|ENSG00000144771|chr3:54925084-54925084|G/T|missense_variant'] 133911 18063 VYIFGGGG True PC9_epitope_Rep3 768.3806399016398 768.37954993586 74.677 2 -1.859405900588963 0.44799501486793775 1.0 ['ENST00000257963.8_1_12:52388897-52389161:+|nuORF'] 31853 17396 GEKSKKRK True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58706496793 73.694 1 -1.8594986487726883 0.44799501486793775 1.0 ['nc|ENSG00000186566|Q9UKJ3-2|GPATCH8', 'ENSG00000186566|ENST00000591680|GPATCH8'] 116120 22878 TSSKGKKGKK True PC9_epitope_Rep2 1047.6400424717897 1047.6389499358602 93.493 2 -1.859680204724337 0.4479961519120187 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 100115 15395 SISPALAC True NCI_RA007_Epitope_Rep1 760.37892564948 760.37782993586 63.961 2 -1.8597037009556077 0.4479961519120187 1.0 ['ENST00000524753.4_1_11:18369576-18369654:+|nuORF'] 39348 19630 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 82.416 3 -1.859832339588275 0.44800218638972394 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 15580 11166 EAQRAWWVPEP True H1975_Epitope_Rep1 1367.6622344683497 1367.6611299358601 47.918 2 -1.8600666609839138 0.4480300843937208 1.0 ['BIRC7|p.L231P|1|0.23|ENSG00000101197|chr20:63239400-63239400|T/C|missense_variant'] 14659 7348 DVFEVEKILDM True H1975_Epitope_Rep3 1336.6584545275198 1336.65734993586 33.241 2 -1.860110206471497 0.44803462900616503 1.0 ['ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 46164 9429 ISLMPESN True PC9_epitope_Rep5 889.42151873745 889.4204299358599 41.224 2 -1.8602408241414043 0.44803462900616503 1.0 ['ENST00000228827.7_1_12:110890687-110890807:-|nuORF'] 93553 22141 RQLLKMRRCA True PC9_epitope_Rep6 1273.72234971045 1273.7212499358602 98.108 2 -1.8602496708033691 0.44803462900616503 1.0 ['ENST00000257637.7_1_7:86848977-86849043:-|nuORF'] 80358 17656 PGGRGPIF True PC9_epitope_Rep5 799.4340724568299 799.43296993586 72.926 2 -1.8603011685608342 0.44803462900616503 1.0 ['ENSG00000169857|ENST00000306730|AVEN'] 32945 22905 GICIKKCP True PC9_epitope_Rep3 860.4612158048 860.46066496793 93.371 1 -1.8603307554592452 0.44803462900616503 1.0 ['ENSG00000164163|ENST00000296577|ABCE1'] 37123 9742 GVPWKLHI True NCI_RA007_Epitope_Rep5 948.5545219426799 948.55342993586 44.112 2 -1.8603599524412213 0.44803462900616503 1.0 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 70162 17319 LVPRGWHS True PC9_epitope_Rep6 950.5086343794201 950.50752993586 79.231 2 -1.8604129518302213 0.44803462900616503 1.0 ['ENST00000368086.5_2_1:160064936-160068275:-|nuORF'] 47538 25538 IVSRIQRYC True H1975_Epitope_Rep2 1136.6124478249599 1136.61134993586 104.86 2 -1.8604449093134323 0.44803462900616503 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 30900 6040 GAPWTSWGPGP True PC9_epitope_Rep5 1111.5086939490698 1111.50758993586 28.226 2 -1.8606578883371587 0.4480625239110237 1.0 ['ENST00000390654.7_2_5:177686746-178016941:-|nuORF'] 82762 18874 PRLPRSTT True NCI_RA007_Epitope_Rep5 926.5297637468201 926.52866993586 79.443 2 -1.8607499841883024 0.44806365931771724 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 70455 26344 LVTVLQRRRP True H1975_Epitope_Rep2 1236.7778733572798 1236.77623490379 108.4 3 -1.8607639540284442 0.44806365931771724 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 34189 22548 GNGVLQVS True PC9_epitope_Rep1 772.40791727864 772.40682993586 91.534 2 -1.860976711422566 0.44807799503787177 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 37185 7044 GVQRRGGL True PC9_epitope_Rep3 841.4882332880097 841.48712993586 32.105 2 -1.8610613945993228 0.44807799503787177 1.0 ['ENST00000339859.8_1_10:75335378-75385356:-|nuORF'] 13234 10453 DLSPKDKK True H1975_Epitope_Rep3 929.51819600361 929.51708993586 45.268 2 -1.861124911381678 0.44807799503787177 1.0 ['nc|ENSG00000065485|Q14554-2|PDIA5', 'ENSG00000065485|ENST00000316218|PDIA5'] 110454 22479 TFDPPGGV True PC9_epitope_Rep2 788.3704691407598 788.36936993586 91.955 2 -1.8611801505421237 0.44807799503787177 1.0 ['ENSG00000168334|ENST00000340369|XIRP1'] 70432 1305 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 6.8066 3 -1.8612006454954908 0.44807799503787177 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 138011 13691 YFTRPGSG True H1975_Epitope_Rep1 883.4188163155098 883.41770993586 57.798 2 -1.8612153132356446 0.44807799503787177 1.0 ['RBBP9|p.W118Gfs*57|1|0.1|ENSG00000089050|chr20:18489974-18489974|G/-|frameshift_variant'] 119402 19800 VAPVGVASK True PC9_epitope_Rep5 826.49125297978 826.49014993586 81.207 2 -1.8613495530101933 0.44808402736791486 1.0 ['ENST00000475136.1_1_1:201351927-201352312:-|nuORF', 'ENSG00000159166|ENST00000391967|LAD1'] 81739 22047 PLPCSHPA True PC9_epitope_Rep6 820.39015903952 820.38906993586 97.738 2 -1.8615020359727028 0.4481021235668929 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 123781 19003 VGRKLVVF True PC9_epitope_Rep4 916.5858220709598 916.58472993586 81.186 2 -1.8615047412323427 0.4481021235668929 1.0 ['ENST00000438029.1_1_7:42951119-42951242:-|nuORF'] 116052 15541 TSPILDQEDSW True PC9_epitope_Rep1 1289.5775613545297 1289.5764699358601 64.603 2 -1.861546918372684 0.4481021235668929 1.0 ['nc|ENSG00000170324|Q68DX3-5|FRMPD2', 'nc|ENSG00000170324|Q68DX3-4|FRMPD2', 'nc|ENSG00000150175|Q6IN97|FRMPD2B', 'nc|ENSG00000170324|Q68DX3-2|FRMPD2', 'ENSG00000170324|ENST00000374201|FRMPD2'] 100316 11019 SKIQTHSTTYR True H1975_Epitope_Rep1 1320.67861280848 1320.6775099358601 47.345 2 -1.8616753044814272 0.44811908457015454 1.0 ['ENSG00000143278|ENST00000367412|F13B'] 139400 23704 YLNQVLQILLL True NCI_RA007_Epitope_Rep3 1328.8067734437197 1328.80617496793 102.77 1 -1.8620176475208494 0.44815640504447796 1.0 ['ENST00000580498.5_1_17:57287412-57290261:+|nuORF'] 58463 23456 LEPRSLRT True PC9_epitope_Rep5 970.5559784946599 970.5554349679301 95.207 1 -1.862138734875006 0.44815640504447796 1.0 ['nc|ENSG00000183914|Q9P225-3|DNAH2', 'ENST00000607376.1_1_8:144372580-144372646:-|nuORF'] 30837 15276 GAPGAFHR True PC9_epitope_Rep1 811.40892033815 811.40782993586 63.58 2 -1.8622519625725484 0.44815640504447796 1.0 ['ENSG00000133302|ENST00000265140|SLF1', 'nc|ENSG00000133302|Q9BQI6-2|SLF1'] 122200 7025 VGALRALH True PC9_epitope_Rep4 835.50282072299 835.50172993586 34.273 2 -1.862280786354794 0.44815640504447796 1.0 ['ENST00000605573.1_1_3:187871072-187871573:-|nuORF'] 124270 12107 VGTLGDAVP True PC9_epitope_Rep1 827.4388830537499 827.43833496793 51.431 1 -1.8624010878965942 0.44815640504447796 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17', 'nc|ENSG00000092096|Q8WUG5-3|SLC22A17', 'ENST00000557699.5_1_14:23818379-23821759:-|nuORF'] 82254 24013 PPFLDHSP True PC9_epitope_Rep4 908.4392174069201 908.43812993586 100.84 2 -1.8625847911125013 0.44815640504447796 1.0 ['ENST00000560131.1_1_15:63356108-63358095:+|nuORF'] 24941 24423 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 101.41 2 -1.8626519343378154 0.44815640504447796 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 82255 22863 PPFLDHSP True PC9_epitope_Rep6 908.4392174069201 908.43812993586 101.04 2 -1.8626749974212438 0.44815640504447796 1.0 ['ENST00000560131.1_1_15:63356108-63358095:+|nuORF'] 115496 2270 TRPPTTFPMDK True NCI_RA007_Epitope_Rep4 1289.64380752289 1289.64217490379 12.769 3 -1.8628104122973195 0.4481684661450365 1.0 ['ENSG00000172188|ENST00000641580|OR4C11'] 36094 9599 GVAFLGPP True H1975_Epitope_Rep3 756.4170254103599 756.4164749679301 41.936 1 -1.8629842997559487 0.4481684661450365 1.0 ['ACACB|p.R2183Dfs*8|1|0.32|ENSG00000076555|chr12:109260528-109260528|T/-|frameshift_variant', 'nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.S901Ffs*17|1|0.28|ENSG00000076555|chr12:109199474-109199475|-/T|frameshift_variant', 'ACACB|p.S376I|1|0.3|ENSG00000076555|chr12:109174141-109174141|G/T|missense_variant'] 33025 18856 GIHKHKHLAE True PC9_epitope_Rep2 1168.6465248345598 1168.6454299358602 77.896 2 -1.8632924233471913 0.44818279170400155 1.0 ['ENST00000484819.1_1_1:154241897-154242149:+|nuORF'] 63437 4402 LLVSAPAP True PC9_epitope_Rep4 766.45889022234 766.45778993586 23.379 2 -1.8633996905600152 0.44818279170400155 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 109348 6193 TCESIPEELQ True H1975_Epitope_Rep3 1147.50670491339 1147.50560993586 28.834 2 -1.8634578377027158 0.44818279170400155 1.0 ['CNTN6|p.W721C|1|0.05|ENSG00000134115|chr3:1377072-1377072|G/T|missense_variant'] 95580 19658 RWTGRRSWD True NCI_RA007_Epitope_Rep5 1218.6006372712998 1218.59899490379 82.528 3 -1.863494725680319 0.44818279170400155 1.0 ['ENST00000222462.2_1_7:120969224-120969682:+|nuORF'] 115351 12893 TRINISLLKYQ True NCI_RA007_Epitope_Rep1 1347.7874349814701 1347.78632993586 54.143 2 -1.8635426760301783 0.44818279170400155 1.0 ['ENST00000515764.2_1_4:25930809-25931061:+|nuORF'] 62915 24520 LLPCLHSA True PC9_epitope_Rep3 852.45275929608 852.45166993586 99.659 2 -1.8635688075221248 0.44818279170400155 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 64019 8458 LPADDFDIY True PC9_epitope_Rep3 1067.4811417885498 1067.48004993586 37.497 2 -1.8640862665719564 0.4481839241225578 1.0 ['ENSG00000170236|ENST00000532404|USP50', 'nc|ENSG00000170236|Q70EL3|USP50'] 125858 9068 VLAKEQND True PC9_epitope_Rep4 915.4661604307499 915.46506993586 42.461 2 -1.864113566148343 0.4481839241225578 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 126808 24149 VLPRRERNRQ True PC9_epitope_Rep3 1322.76434855146 1322.7632499358601 98.176 2 -1.8642142746285757 0.4481899537790793 1.0 ['nc|ENSG00000168621|P39905-5|GDNF', 'nc|ENSG00000168621|P39905-2|GDNF', 'nc|ENSG00000168621|P39905-4|GDNF', 'ENSG00000168621|ENST00000326524|GDNF', 'nc|ENSG00000168621|P39905-3|GDNF'] 32731 6975 GGYTDIDLAVD True PC9_epitope_Rep6 1137.51898384925 1137.51733490379 35.796 3 -1.8644570643906426 0.4481922181794342 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 96885 5430 SATLRDAVP True NCI_RA007_Epitope_Rep3 928.4977949121999 928.49668993586 28.371 2 -1.864485484736166 0.4481922181794342 1.0 ['ENSG00000172922|ENST00000308418|RNASEH2C', 'ENST00000528220.1_1_11:65487749-65488268:-|nuORF'] 100438 15959 SLAFPEGRI True PC9_epitope_Rep2 988.5341804209198 988.53308993586 66.638 2 -1.8645111771855307 0.4481922181794342 1.0 ['ENST00000284268.6_1_5:14710393-14710471:-|nuORF'] 65499 24506 LRLRPPLRAAT True PC9_epitope_Rep4 1262.7935234214199 1262.7924299358601 102.75 2 -1.8645169280917078 0.4481922181794342 1.0 ['ENST00000589114.5_1_18:33877702-34289359:+|nuORF'] 5617 4411 ANQITFRTQA True NCI_RA007_Epitope_Rep4 1148.59382055536 1148.59216490379 23.324 3 -1.86472529908729 0.4482065401466234 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10'] 44546 20570 ILNHMKRAT True PC9_epitope_Rep3 1082.6018831412598 1082.6007899358601 84.388 2 -1.8648653423203836 0.4482065401466234 1.0 ['nc|ENSG00000014257|P15309-3|ACP3', 'ENSG00000014257|ENST00000336375|ACP3', 'nc|ENSG00000014257|P15309-2|ACP3'] 109007 7271 TAHFARPAV True PC9_epitope_Rep4 968.5191990631198 968.51810993586 35.282 2 -1.8648804942209418 0.4482065401466234 1.0 ['ENSG00000139182|ENST00000266546|CLSTN3', 'nc|ENSG00000139182|Q9BQT9-2|CLSTN3'] 37899 11195 GYSEIDTWSL True PC9_epitope_Rep2 1169.52406922969 1169.5229699358601 48.386 2 -1.864968498311684 0.4482065401466234 1.0 ['ENST00000413990.1_1_1:158146374-158146917:-|nuORF'] 95317 19050 RVRNRTPF True NCI_RA007_Epitope_Rep1 1044.59409533888 1044.59298993586 78.241 2 -1.8650409356264719 0.4482065401466234 1.0 ['ENST00000571636.1_1_16:11336795-11337332:+|nuORF'] 10545 24362 CLRKTSET True NCI_RA007_Epitope_Rep5 936.4698659122 936.46876993586 101.17 2 -1.8650743389754256 0.4482065401466234 1.0 ['ENSG00000150456|ENST00000382758|EEF1AKMT1'] 83371 12712 PTGTQLKE True PC9_epitope_Rep4 872.46034677432 872.45924993586 56.751 2 -1.8651519475636176 0.4482234944497859 1.0 ['ENST00000521141.1_1_8:22613398-22614593:+|nuORF'] 15681 11870 EATVILAI True NCI_RA007_Epitope_Rep4 828.4956696538799 828.49456993586 52.651 2 -1.865215234041112 0.44822462580574673 1.0 ['ENST00000441603.1_1_11:5592613-5592883:-|nuORF'] 102971 23263 SPFCSCLL True H1975_Epitope_Rep2 868.38229677776 868.38118993586 95.951 2 -1.8652390662870064 0.44822462580574673 1.0 ['ENST00000334801.7_1_11:118768619-118768991:-|nuORF'] 83268 12101 PTAEKPEQE True H1975_Epitope_Rep3 1027.4822044177097 1027.4816749679298 51.712 1 -1.8655207386737178 0.4482634298762168 1.0 ['nc|ENSG00000103994|Q9H2Y7|ZNF106', 'ENSG00000103994|ENST00000564754|ZNF106', 'ZNF106|p.E1277Kfs*14|1|0.34|ENSG00000103994|chr15:42439680-42439680|T/-|frameshift_variant'] 101200 25075 SLHDAHLL True PC9_epitope_Rep2 904.4766655448 904.47556993586 102.12 2 -1.865876187806572 0.448269457676004 1.0 ['ENSG00000182308|ENST00000333141|DCAF4L1'] 121134 23568 VERRRSGR True PC9_epitope_Rep5 1014.5795079038999 1014.5789749679301 95.639 1 -1.8659261409380372 0.44827548534408357 1.0 ['ENST00000264010.8_1_16:67596501-67605146:+|nuORF'] 709 15768 AAVEALSSDPA True PC9_epitope_Rep5 1029.4978544818498 1029.4967499358602 65.646 2 -1.866072771919413 0.44829959469941116 1.0 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1'] 42060 19033 IDKLRFPTK True PC9_epitope_Rep6 1116.66552894364 1116.6644299358602 85.852 2 -1.8661152179983136 0.44829959469941116 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'PRKD2|p.E592D|1|0.15|ENSG00000105287|chr19:46690633-46690633|C/A|missense_variant', 'ENSG00000184304|ENST00000331968|PRKD1'] 119365 13112 VAPETRAVI True PC9_epitope_Rep6 954.5498304850598 954.54872993586 62.054 2 -1.8661216659302315 0.44829959469941116 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 11505 20938 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 86.684 3 -1.8661318796137552 0.44829959469941116 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 32727 12738 GGWPGGHL True NCI_RA007_Epitope_Rep4 779.3714722002699 779.37036993586 56.055 2 -1.8662438677956887 0.448305621709017 1.0 ['ENST00000309100.7_1_11:65380814-65380982:-|nuORF'] 114039 14604 TPDIVSRI True PC9_epitope_Rep5 899.50763131991 899.50652993586 61.175 2 -1.8663679084647669 0.44833349719791565 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF', 'ENST00000551743.5_1_14:105849507-105861006:+|nuORF'] 20680 6019 EQDLVWKFRYY True NCI_RA007_Epitope_Rep1 1545.76161415645 1545.76050993586 27.454 2 -1.8665435043702117 0.4483504478916321 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 112112 24365 TIWEIKLL True H1975_Epitope_Rep3 1014.6113681124599 1014.61026993586 101.45 2 -1.8666250706748373 0.44835760243819844 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF'] 24935 22085 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 92.079 2 -1.8666897294147589 0.44835760243819844 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 60243 9510 LGQRVWDWWHR True NCI_RA007_Epitope_Rep2 1537.76909957873 1537.7680099358602 41.606 2 -1.866711818084323 0.44835760243819844 1.0 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 10886 23778 CYGGIKKG True PC9_epitope_Rep3 824.4214591678 824.42036993586 96.746 2 -1.8667978981973998 0.44836362841912086 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.R1054Pfs*53|1|0.12|ENSG00000138829|chr5:128345413-128345413|C/-|frameshift_variant', 'FBN2|p.D1008Mfs*99|1|0.14|ENSG00000138829|chr5:128345552-128345552|C/-|frameshift_variant', 'ENST00000511489.1_1_5:127701040-127712520:-|nuORF'] 92417 25063 RLRAALRPRPR True PC9_epitope_Rep3 1360.86400302308 1360.8629099358602 101.75 2 -1.8670990077908038 0.448386603456186 1.0 ['ENST00000221665.4_1_19:56104161-56104986:-|nuORF'] 27037 20433 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 85.532 2 -1.8671005323987038 0.448386603456186 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 45417 21337 IQHAPRPQL True PC9_epitope_Rep1 1058.5985120129799 1058.59740993586 86.904 2 -1.8672899265026401 0.4484253989753897 1.0 ['ENST00000579018.5_2_17:71084805-71087985:-|nuORF', 'ENST00000583146.5_1_17:71084805-71085878:-|nuORF', 'ENST00000255559.7_1_17:71084805-71088829:-|nuORF', 'ENST00000580557.5_2_17:71084805-71088773:-|nuORF'] 84619 14618 QDEFVSSQLK True H1975_Epitope_Rep1 1179.57716743171 1179.57657496793 61.438 1 -1.8675255417706225 0.44844837191012465 1.0 ['PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant'] 15929 5104 EDLRNDEHSP True PC9_epitope_Rep3 1210.52144346074 1210.5203499358602 24.718 2 -1.8677353631140434 0.44844837191012465 1.0 ['nc|ENSG00000049246|P56645|PER3', 'ENSG00000049246|ENST00000377532|PER3'] 102777 13683 SNLLHSIK True PC9_epitope_Rep5 910.52361573722 910.52250993586 57.659 2 -1.867963179888977 0.4484653194975423 1.0 ['ENSG00000171502|ENST00000370571|COL24A1', 'nc|ENSG00000171502|Q17RW2-2|COL24A1'] 3002 21761 AFIIFWVRSKR True PC9_epitope_Rep6 1421.82957457697 1421.82846993586 96.596 2 -1.8680480777719375 0.4484833921335183 1.0 ['nc|ENSG00000178562|P10747-2|CD28', 'nc|ENSG00000178562|P10747-4|CD28', 'nc|ENSG00000178562|P10747-3|CD28', 'ENSG00000178562|ENST00000324106|CD28', 'nc|ENSG00000178562|P10747-7|CD28'] 136360 26993 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 111.37 2 -1.8680634681680057 0.4484833921335183 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 68721 20881 LTKRLTEAN True PC9_epitope_Rep4 1044.5927579262 1044.5916699358602 88.475 2 -1.868081688768524 0.4484833921335183 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 98820 20810 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 86.167 2 -1.868245627369937 0.44848451750314017 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 23225 14810 EVMPQAENQD True H1975_Epitope_Rep1 1159.4815527947098 1159.48097496793 62.194 1 -1.8682619372758038 0.44848451750314017 1.0 ['IL10|p.E114Rfs*3|1|0.15|ENSG00000136634|chr1:206770945-206770945|C/-|frameshift_variant', 'ENST00000367099.3_1_1:206943020-206944398:-|nuORF', 'ENSG00000136634|ENST00000423557|IL10'] 125402 14184 VISMYREL True PC9_epitope_Rep2 1009.5266525123299 1009.52554993586 59.827 2 -1.8684100896634743 0.4484916664846327 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.D4264E|1|0.16|ENSG00000084674|chr2:21002630-21002630|A/T|missense_variant'] 19842 8043 ELSTPGGK True PC9_epitope_Rep3 787.4075829254699 787.40648993586 35.912 2 -1.8684466564016575 0.4484916664846327 1.0 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-3|RIOX2'] 126356 23887 VLISTGTL True H1975_Epitope_Rep2 802.48001958974 802.47892993586 98.393 2 -1.868637374643522 0.4484916664846327 1.0 ['ENST00000501695.3_1_5:147758402-147763328:-|nuORF'] 121757 24457 VFMAPPVH True NCI_RA007_Epitope_Rep5 896.4578446765199 896.45674993586 101.54 2 -1.8688017266890455 0.4484988149976518 1.0 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'GRHL2|p.G523Wfs*25|1|0.2|ENSG00000083307|chr8:101644176-101644177|-/T|frameshift_variant'] 22014 8100 ESIHSPTP True PC9_epitope_Rep2 866.4133965819 866.41228993586 36.515 2 -1.8688407869640244 0.4484988149976518 1.0 ['nc|nan|Q49A92-3|C8orf34', 'nc|nan|Q49A92-2|C8orf34', 'ENSG00000165084|ENST00000518698|C8orf34', 'ENST00000521406.5_1_8:69442879-69730478:+|nuORF'] 70446 2665 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 13.705 3 -1.8688649939634039 0.4484988149976518 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 103256 20600 SPLIYWMK True H1975_Epitope_Rep3 1036.5415743004799 1036.54046993586 86.097 2 -1.8692546085591062 0.44853270425827024 1.0 ['ENSG00000169306|ENST00000378993|IL1RAPL1'] 66832 17608 LSMKLLAYA True NCI_RA007_Epitope_Rep4 1008.5677890483199 1008.5672749679301 76.179 1 -1.8693007859606854 0.44853270425827024 1.0 ['ENSG00000120137|ENST00000239231|PANK3'] 44415 23709 ILGKIILFLP True PC9_epitope_Rep6 1125.75255304289 1125.75091490379 104.37 3 -1.8694506431911861 0.44853872701061553 1.0 ['ENSG00000157214|ENST00000394621|STEAP2'] 49784 17816 KHERKDKRS True NCI_RA007_Epitope_Rep4 1182.6581521474197 1182.65650490379 77.137 3 -1.8696243461951263 0.4485665920384426 1.0 ['nc|ENSG00000212719|A8MQB3|LINC02693'] 133055 26012 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 110.36 2 -1.8700952346142385 0.44860537754188234 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 83485 17742 PTPTPQVVK True PC9_epitope_Rep2 965.55458151233 965.55348993586 73.527 2 -1.870200498542313 0.4486223202682189 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4'] 85545 5894 QGEASSRFV True PC9_epitope_Rep4 979.4723084403499 979.47120993586 29.57 2 -1.8707281183263944 0.4486437494540054 1.0 ['nc|ENSG00000185760|Q9NR82-4|KCNQ5'] 94165 22308 RRPGLRPEL True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 92.191 2 -1.8709054906780973 0.4486437494540054 1.0 ['ENST00000440364.6_1_5:153826115-153832963:+|nuORF', 'ENST00000426761.2_1_5:153826115-153833002:+|nuORF', 'ENST00000297109.10_1_5:153825644-153830670:+|nuORF'] 12559 19144 DKRIAIQKEKK True NCI_RA007_Epitope_Rep3 1355.8248831193498 1355.82322490379 83.605 3 -1.871194226612532 0.4486437494540054 1.0 ['SCN11A|p.E28D|1|0.06|ENSG00000168356|chr3:38950279-38950279|C/A|missense_variant'] 14545 24475 DTRRWKKKQ True PC9_epitope_Rep5 1244.7101877202797 1244.7090899358602 99.218 2 -1.8712436674383186 0.4486437494540054 1.0 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1'] 22662 14176 ETPRLQYL True PC9_epitope_Rep5 1018.54474510462 1018.54364993586 59.538 2 -1.8712983546849271 0.4486437494540054 1.0 ['ENSG00000105737|ENST00000593562|GRIK5', 'nc|ENSG00000105737|Q16478-2|GRIK5'] 28712 19526 FSRQREKMERR True NCI_RA007_Epitope_Rep4 1521.7946627035697 1521.7935699358602 84.37 2 -1.8714691799169902 0.4486437494540054 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 33415 14389 GLAEPYVK True H1975_Epitope_Rep1 875.4752685624699 875.47472496793 60.541 1 -1.8714813852123573 0.4486437494540054 1.0 ['ENST00000424556.2_1_11:1856509-1858658:+|nuORF', 'ENSG00000149043|ENST00000341958|SYT8'] 10674 2057 CQFCDFRYSKS True NCI_RA007_Epitope_Rep2 1382.5747419868997 1382.57308490379 11.22 3 -1.871484694905187 0.4486437494540054 1.0 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 113953 19112 TPAFDKPK True H1975_Epitope_Rep1 902.4861675993399 902.48506993586 79.651 2 -1.8715313396617277 0.4486437494540054 1.0 ['ENSG00000196839|ENST00000372874|ADA', 'ENST00000545776.5_1_20:43255095-43280248:-|nuORF', 'ENST00000492931.5_1_20:43251503-43280248:-|nuORF'] 80285 18427 PGEIVSLGIL True NCI_RA007_Epitope_Rep2 996.5855472874399 996.58444993586 76.443 2 -1.8715810679988836 0.44864487103889583 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 102145 23102 SLRQQLRER True PC9_epitope_Rep3 1184.6738022115599 1184.6727099358602 94.13 2 -1.871583916519227 0.44864487103889583 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 135716 3866 WLSQLRFYWEK True NCI_RA007_Epitope_Rep1 1554.7983340183398 1554.79669490379 19.054 3 -1.8717109892152175 0.4486504782285889 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7674005-7689702:+|nuORF'] 13603 24886 DPGLRGPLHW True PC9_epitope_Rep2 1146.5934266325398 1146.59179490379 101.4 3 -1.8717427636579798 0.4486504782285889 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 104835 18401 SRAGSLEPEGR True PC9_epitope_Rep5 1157.57889876721 1157.5772549037902 75.798 3 -1.871784810759921 0.4486504782285889 1.0 ['ENST00000479115.5_1_3:49723420-49723642:-|nuORF'] 113273 6132 TLRHHDLHSWH True NCI_RA007_Epitope_Rep4 1437.7014139417302 1437.69976490379 30.199 3 -1.871954060524263 0.4486504782285889 1.0 ['nc|ENSG00000070413|P98153-3|DGCR2', 'nc|ENSG00000070413|P98153-2|DGCR2', 'ENSG00000070413|ENST00000263196|DGCR2'] 9346 13205 AVRTFVSH True H1975_Epitope_Rep1 915.4926499621099 915.49154993586 55.889 2 -1.8720527235477105 0.4486504782285889 1.0 ['ENST00000591478.1_1_16:5080487-5083590:-|nuORF', 'nc|ENSG00000103174|Q9UK23-3|NAGPA', 'ENST00000568202.5_1_16:5075546-5083878:-|nuORF', 'nc|ENSG00000103174|Q9UK23-2|NAGPA', 'ENSG00000103174|ENST00000312251|NAGPA'] 123715 23193 VGREGRLP True PC9_epitope_Rep1 882.5035489989798 882.5030049679301 94.008 1 -1.872209091613409 0.4486504782285889 1.0 ['ENST00000243440.1_1_1:212870399-212873318:-|nuORF'] 132617 23955 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 98.662 2 -1.8722175095093694 0.4486504782285889 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 39604 23263 HLKVFPRHLC True PC9_epitope_Rep2 1248.6913668519999 1248.6902699358602 94.965 2 -1.8722752693160716 0.4486504782285889 1.0 ['PKD1L1|p.Q2381H|1|0.31|ENSG00000158683|chr7:47813961-47813961|C/A|missense_variant'] 23296 5980 EVQEKVLM True H1975_Epitope_Rep3 974.5106680950198 974.50956993586 28.013 2 -1.8723103452337242 0.4486504782285889 1.0 ['ENST00000331457.8_1_22:31796711-31799146:+|nuORF'] 70713 20778 LWRCQFLLPFV True H1975_Epitope_Rep2 1420.7689484663601 1420.76731490379 86.036 3 -1.8723158588712234 0.4486504782285889 1.0 ['nc|ENSG00000080822|Q9NY35-3|CLDND1', 'ENST00000508503.5_1_3:98235702-98241699:-|nuORF', 'nc|ENSG00000080822|Q9NY35-2|CLDND1', 'ENSG00000080822|ENST00000341181|CLDND1', 'ENST00000507411.5_1_3:98235680-98240280:-|nuORF'] 113264 15017 TLRGLWTV True PC9_epitope_Rep2 944.5443511817999 944.54324993586 63.016 2 -1.8725318663161221 0.448656498051076 1.0 ['ENST00000272298.11_1_2:47387407-47387581:-|nuORF'] 39347 22403 HKEEWIRW True H1975_Epitope_Rep2 1182.5934266325398 1182.59179490379 92.585 3 -1.8727657669089433 0.4486647597004171 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 43990 25047 IIFIKLNL True H1975_Epitope_Rep2 972.6371889374799 972.63608993586 102.92 2 -1.8728828727292215 0.4486647597004171 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 32052 1566 GERKRYLLC True PC9_epitope_Rep3 1136.6124478249599 1136.61134993586 8.623 2 -1.8729443029471722 0.4486647597004171 1.0 ['ADAMTS12|p.R589L|1|0.27|ENSG00000151388|chr5:33637699-33637699|C/A|missense_variant'] 128533 15672 VPSVAPGLSP True PC9_epitope_Rep4 922.5123823471799 922.5118349679301 68.209 1 -1.8729578914317804 0.4486647597004171 1.0 ['ENST00000460402.5_1_22:19799956-19842309:-|nuORF'] 23620 23524 EWPGSPKALE True PC9_epitope_Rep2 1112.5502244078798 1112.54912993586 95.959 2 -1.872980415487512 0.4486647597004171 1.0 ['nc|ENSG00000151553|Q5W0V3-2|FHIP2A', 'ENSG00000151553|ENST00000369248|FHIP2A'] 22825 10843 EVAGAVWTRR True H1975_Epitope_Rep1 1143.61489035311 1143.61378993586 46.666 2 -1.87305879825097 0.4486877156207695 1.0 ['ENST00000581616.2_1_17:16855864-16875385:-|nuORF'] 12766 18455 DLELFPSPG True PC9_epitope_Rep3 973.4756624852898 973.47511496793 76.191 1 -1.8730936561343818 0.4486877156207695 1.0 ['nc|ENSG00000134954|P14921-4|ETS1'] 55922 16586 LARAGRPA True NCI_RA007_Epitope_Rep1 810.4824196315799 810.48187496793 68.632 1 -1.8731383905368177 0.4486937345109556 1.0 ['ENST00000273261.7_1_3:66550989-66551145:-|nuORF'] 56233 7461 LCLLLLWWRRR True NCI_RA007_Epitope_Rep5 1526.9020283245798 1526.9009299358602 35.378 2 -1.8733220247095101 0.4487057718970731 1.0 ['ENSG00000121716|ENST00000609309|PILRB'] 96576 5931 SAFGYVFPK True H1975_Epitope_Rep3 1014.5174677276199 1014.51636993586 27.822 2 -1.8733972141044284 0.4487057718970731 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 27303 4387 FLRILCSHEHY True H1975_Epitope_Rep2 1416.6972400780799 1416.6961499358601 21.986 2 -1.8735177505018434 0.4487227074235808 1.0 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 123319 7903 VGLREAALR True NCI_RA007_Epitope_Rep2 983.5876129761098 983.58650993586 35.374 2 -1.873586230540613 0.44872872566893374 1.0 ['ENST00000544490.5_1_11:72532712-72533589:+|nuORF', 'nc|ENSG00000168010|Q8NAA4-3|ATG16L2', 'ENST00000439504.6_1_11:72525490-72534007:+|nuORF', 'nc|ENSG00000168010|Q8NAA4-2|ATG16L2', 'ENSG00000168010|ENST00000321297|ATG16L2'] 14790 22424 DVPLYDIC True PC9_epitope_Rep4 936.42626976472 936.42516993586 94.485 2 -1.8736251579346226 0.44873474378288686 1.0 ['ENSG00000153495|ENST00000283547|TEX29'] 133327 25565 VVVAKPKG True PC9_epitope_Rep2 796.5170738047999 796.51596993586 104.02 2 -1.8738822671609119 0.448795345130618 1.0 ['ENSG00000169340|ENST00000302451|PDILT'] 102142 18197 SLRQQLRER True NCI_RA007_Epitope_Rep3 1184.6738022115599 1184.6727099358602 79.695 2 -1.873973338828391 0.44879646307515964 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 82241 5645 PPDSIVPL True PC9_epitope_Rep1 836.4643695256 836.46326993586 26.537 2 -1.8740024136649647 0.44879646307515964 1.0 ['PAK4|p.A579D|1|0.3|ENSG00000130669|chr19:39178539-39178539|C/A|missense_variant'] 123002 6340 VGIGALFR True H1975_Epitope_Rep3 831.49667271339 831.49556993586 29.377 2 -1.8740591462965515 0.4488035979390446 1.0 ['ENST00000467673.5_1_1:39571193-39720158:+|nuORF'] 122657 14571 VGGCPGDD True NCI_RA007_Epitope_Rep5 718.25920443962 718.25865496793 62.719 1 -1.8741028127647574 0.4488035979390446 1.0 ['ENST00000426654.6_1_16:69599384-69602431:+|nuORF'] 123835 9007 VGRPAQPP True PC9_epitope_Rep6 820.4555361773998 820.45442993586 44.674 2 -1.8741442351304547 0.4488035979390446 1.0 ['ENST00000517894.5_3_8:143530803-143545560:+|nuORF'] 32736 24138 GHAFPSPL True NCI_RA007_Epitope_Rep5 824.41808803952 824.41698993586 100.25 2 -1.8742425341703404 0.44880695090270045 1.0 ['ENSG00000149506|ENST00000278853|ZP1'] 30755 10942 GALQHLCG True H1975_Epitope_Rep1 797.38540801225 797.3848549679301 47.052 1 -1.8742630966630849 0.44880695090270045 1.0 ['nc|ENSG00000107951|Q9NVV4-2|MTPAP', 'ENST00000488290.5_1_10:30602540-30654262:-|nuORF'] 63435 5203 LLVSAPAP True PC9_epitope_Rep1 766.45889022234 766.45778993586 24.864 2 -1.8742897603411375 0.44880695090270045 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 133061 26694 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 108.87 2 -1.8743886430455163 0.44880695090270045 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 80809 9701 PHNGGSPP True PC9_epitope_Rep3 761.34565137525 761.3451049679301 42.266 1 -1.8744113239199998 0.44880695090270045 1.0 ['WIPF1|p.R201G|1|0.23|ENSG00000115935|chr2:174572204-174572204|G/C|missense_variant'] 84657 10800 QDGQPLLKV True H1975_Epitope_Rep3 996.5603951687599 996.55928993586 46.621 2 -1.8744153702506856 0.44880695090270045 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 105645 9021 SSEEDLLVSW True NCI_RA007_Epitope_Rep1 1163.5346339133898 1163.53352993586 39.092 2 -1.8744204075644957 0.4488129673088468 1.0 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1', 'ENST00000454762.1_1_6:43472456-43473590:+|nuORF'] 113881 23451 TNPTAKRQFVQ True PC9_epitope_Rep1 1288.68878356936 1288.6876899358601 94.988 2 -1.8745076610939166 0.44884081383164515 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.R1638Pfs*25|1|0.1|ENSG00000137076|chr9:35707114-35707115|-/G|frameshift_variant'] 126607 12097 VLMEEMILYY True PC9_epitope_Rep5 1302.6239835950998 1302.62288993586 51.526 2 -1.8748395490837706 0.4489014047611251 1.0 ['nc|ENSG00000196116|Q8NHU6-3|TDRD7', 'nc|ENSG00000196116|Q8NHU6-2|TDRD7', 'ENSG00000196116|ENST00000355295|TDRD7'] 14213 4339 DSEPNCVEELP True H1975_Epitope_Rep3 1230.50743318938 1230.50632993586 21.806 2 -1.8750118154333837 0.448927254075998 1.0 ['ENST00000603996.1_1_5:151228490-151229422:+|nuORF'] 57989 21283 LEHFRLFFV True PC9_epitope_Rep6 1206.65496425994 1206.65332490379 94.717 3 -1.875033237747353 0.448927254075998 1.0 ['ENSG00000203499|ENST00000527139|IQANK1'] 88638 21894 QTELEDVFV True PC9_epitope_Rep5 1078.51825557326 1078.51714993586 89.253 2 -1.8754026388587146 0.448927254075998 1.0 ['nc|ENSG00000119866|Q9H165-8|BCL11A'] 112899 12424 TLKVEHPD True PC9_epitope_Rep3 937.48689587533 937.48578993586 52.815 2 -1.8754357846580725 0.448927254075998 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1285Qfs*17|1|0.07|ENSG00000187323|chr18:53486912-53486912|C/-|frameshift_variant'] 61129 26282 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 107.25 3 -1.875497557160485 0.448927254075998 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 133886 23554 VYGYLLHT True NCI_RA007_Epitope_Rep3 964.50181766348 964.50072993586 102.19 2 -1.875786313489701 0.448927254075998 1.0 ['nc|ENSG00000240268|A6NHM9|MOXD2P'] 119271 25458 VALKPLGGL True PC9_epitope_Rep5 866.5589386167799 866.5583949679301 103.16 1 -1.8758224401029464 0.448927254075998 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 119265 25520 VALKPLGGL True PC9_epitope_Rep1 866.5589386167799 866.5583949679301 103.16 1 -1.8758239690667715 0.448927254075998 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 102735 20562 SMRGINGS True NCI_RA007_Epitope_Rep5 820.38613628824 820.38502993586 86.031 2 -1.8759288807043015 0.448927254075998 1.0 ['LSAMP|p.V311M|1|0.12|ENSG00000185565|chr3:115810403-115810403|C/T|missense_variant'] 10495 22098 CITPKRRLTR True PC9_epitope_Rep4 1242.7342942931398 1242.73264490379 93.216 3 -1.876031818633014 0.448927254075998 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 89898 18314 RCHLPDPCL True PC9_epitope_Rep4 1052.48955581096 1052.4884499358602 78.513 2 -1.8760456376379382 0.448927254075998 1.0 ['ENST00000476429.5_1_2:219143213-219144098:-|nuORF'] 66749 17597 LSLLHDRSF True PC9_epitope_Rep1 1086.5821932425 1086.58108993586 72.479 2 -1.8761288235995726 0.448927254075998 1.0 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 135674 25351 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 106.92 3 -1.8761312675391397 0.448927254075998 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 21542 5822 ERNHWHYRDLE True H1975_Epitope_Rep1 1553.71237254825 1553.7112699358602 27.465 2 -1.8761758612306771 0.448927254075998 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 86411 21676 QKHWLFKHLF True PC9_epitope_Rep6 1382.76116066398 1382.7600699358602 96.262 2 -1.8762565159024955 0.448927254075998 1.0 ['TG|p.R2605Efs*49|1|0.12|ENSG00000042832|chr8:133116665-133116665|C/-|frameshift_variant', 'nc|ENSG00000042832|P01266-2|TG', 'ENSG00000042832|ENST00000220616|TG'] 52481 24822 KKVKMATK True PC9_epitope_Rep5 932.5841078187999 932.58355496793 100.64 1 -1.87629666718804 0.448927254075998 1.0 ['nc|nan|Q6PH81-2|C16orf87', 'ENSG00000155330|ENST00000285697|C16orf87'] 61145 13196 LIKCGIRL True NCI_RA007_Epitope_Rep3 914.5735431350998 914.57244993586 59.178 2 -1.8764446202119514 0.448927254075998 1.0 ['ENSG00000095464|ENST00000371447|PDE6C'] 34182 23534 GNGGKKKV True H1975_Epitope_Rep1 786.47118624154 786.47008993586 97.769 2 -1.8765198554858882 0.4489332678561685 1.0 ['ENST00000373839.7_1_1:28733953-28786728:+|nuORF'] 123522 23673 VGPLEVNVRSR True PC9_epitope_Rep1 1224.6938689498 1224.69276993586 95.849 2 -1.8766800105275363 0.44893928150508533 1.0 ['ENSG00000138615|ENST00000261883|CILP'] 23249 10089 EVNRNSYLA True NCI_RA007_Epitope_Rep1 1064.5250722892 1064.5239699358601 43.253 2 -1.8770146718376812 0.4489780328906446 1.0 ['ENSG00000168411|ENST00000361070|RFWD3'] 64336 24286 LPLDRADR True PC9_epitope_Rep2 954.5246783663799 954.5241249679301 98.96 1 -1.877298590351652 0.44898404591981494 1.0 ['ENST00000497906.5_1_X:122993690-123022483:+|nuORF', 'ENST00000422098.5_1_X:122993624-123019513:+|nuORF'] 61126 26057 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 106.15 3 -1.8773536859406486 0.4489851593190746 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 61546 20477 LKGWHKRFFV True NCI_RA007_Epitope_Rep2 1316.7505959802797 1316.74948993586 84.723 2 -1.8773564021618934 0.4489851593190746 1.0 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'OSBPL6|p.K117Sfs*18|1|0.18|ENSG00000079156|chr2:178331581-178331581|A/-|frameshift_variant'] 15777 9459 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.6909299358601 40.787 2 -1.877453070777208 0.44900920954999785 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 44490 25796 ILLGPKGK True NCI_RA007_Epitope_Rep1 824.5483739330799 824.5478249679301 106.76 1 -1.8774738497265635 0.44900920954999785 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 27247 6390 FLPPAPAA True NCI_RA007_Epitope_Rep3 782.4326754744999 782.43156993586 32.139 2 -1.8775374442139383 0.44900920954999785 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 123470 8559 VGPASPPPW True NCI_RA007_Epitope_Rep1 906.4599528515 906.45884993586 37.295 2 -1.8775860225663783 0.44900920954999785 1.0 ['WDR91|p.D718Pfs*28|1|0.1|ENSG00000105875|chr7:135186243-135186244|-/CACGGTGACCACAGGGG|frameshift_variant'] 139562 4582 YLVFMAEL True PC9_epitope_Rep6 984.4990407821599 984.49794993586 24.894 2 -1.8776577202677145 0.4490103223272156 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 29214 8782 FTTNMLESKS True H1975_Epitope_Rep1 1156.5434247752798 1156.5423299358602 38.708 2 -1.8776787316643453 0.4490103223272156 1.0 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-4|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-3|KLHL7'] 106331 22750 STGDVAGGW True PC9_epitope_Rep2 848.3664463894798 848.36534993586 93.002 2 -1.8777650947857583 0.449012547735952 1.0 ['ENST00000416030.1_1_9:76089327-76090080:-|nuORF'] 82534 10582 PPRRRLCQRRH True NCI_RA007_Epitope_Rep1 1473.83238562497 1473.83128993586 45.147 2 -1.877881045748415 0.449012547735952 1.0 ['ENST00000395824.5_1_17:16472307-16472361:-|nuORF'] 61125 25988 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 105.81 3 -1.877927398472699 0.449012547735952 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 73216 21647 MSCICILS True NCI_RA007_Epitope_Rep5 868.38566790604 868.38456993586 90.357 2 -1.8779449318702344 0.449012547735952 1.0 ['ENST00000476496.5_3_17:15884366-15884429:-|nuORF'] 38167 4303 HDKDLREIQH True NCI_RA007_Epitope_Rep1 1289.64764703337 1289.64601490379 20.848 3 -1.8780758307332461 0.44901855953562975 1.0 ['ENSG00000107295|ENST00000380607|SH3GL2'] 114270 7195 TPPGGPSSL True PC9_epitope_Rep5 811.40758292547 811.40648993586 32.641 2 -1.8783526918344304 0.4490267958453347 1.0 ['nc|ENSG00000142405|P59046-4|NLRP12', 'nc|ENSG00000142405|P59046-3|NLRP12', 'nc|ENSG00000142405|P59046-6|NLRP12', 'nc|ENSG00000142405|P59046-2|NLRP12', 'NLRP12|p.T1013Nfs*29|1|0.27|ENSG00000142405|chr19:53795919-53795920|-/T|frameshift_variant', 'ENSG00000142405|ENST00000324134|NLRP12', 'nc|ENSG00000142405|P59046-7|NLRP12'] 65522 19720 LRQDPPLIF True NCI_RA007_Epitope_Rep4 1097.62332977849 1097.62222993586 85.22 2 -1.8785720942012174 0.4490267958453347 1.0 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'IGSF9|p.R978Gfs*9|1|0.16|ENSG00000085552|chr1:159928456-159928456|T/-|frameshift_variant', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000493195.5_1_1:159899139-159902434:-|nuORF', 'ENST00000496645.5_1_1:159897137-159899822:-|nuORF'] 97758 21942 SEISLSKTLS True PC9_epitope_Rep4 1063.57610480255 1063.5750099358602 92.61 2 -1.878628929652049 0.4490267958453347 1.0 ['ENSG00000186714|ENST00000335185|CCDC73'] 62562 5905 LLKKVALFSKL True PC9_epitope_Rep1 1258.8376796491798 1258.83658993586 27.529 2 -1.8786900177175156 0.4490267958453347 1.0 ['nc|ENSG00000174678|A6NHR8|FAM47DP'] 56991 5742 LDRESQAA True PC9_epitope_Rep2 888.4301092751998 888.42900993586 27.478 2 -1.8787061347536849 0.4490267958453347 1.0 ['nc|ENSG00000136099|O95206-2|PCDH8', 'ENSG00000136099|ENST00000377942|PCDH8'] 136168 20387 WRRRPRTRR True NCI_RA007_Epitope_Rep1 1338.7969860924197 1338.79588993586 83.513 2 -1.8789389960043987 0.4490437173374647 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 45038 16996 IPGLEAAHF True PC9_epitope_Rep5 953.49706663621 953.49596993586 70.394 2 -1.8789509055731797 0.4490497283379519 1.0 ['ENSG00000181609|ENST00000322641|OR52D1'] 105405 8154 SRSNDTLYIP True PC9_epitope_Rep1 1164.57750178488 1164.57640993586 36.194 2 -1.8791252514578864 0.44906664921066125 1.0 ['ENSG00000143387|ENST00000271651|CTSK'] 39356 24739 HKEEWIRW True PC9_epitope_Rep3 1182.5934266325398 1182.59179490379 100.53 3 -1.8792614451043246 0.4490726598298058 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 110325 20573 TETKVTKTVKT True NCI_RA007_Epitope_Rep4 1234.7132669816997 1234.7121699358602 89.109 2 -1.8792939225421934 0.44907867031780146 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000487793.5_1_22:19968732-19974706:-|nuORF', 'ENST00000473551.5_1_22:19968732-19978281:-|nuORF'] 11157 5020 DDLEEEDIKR True NCI_RA007_Epitope_Rep5 1260.5833750109598 1260.58226993586 26.012 2 -1.8793577301173192 0.4490940230612312 1.0 ['ENSG00000149231|ENST00000646818|CCDC82', 'nc|ENSG00000149231|Q8N4S0-2|CCDC82', 'ENST00000530106.1_1_11:96116391-96117917:-|nuORF'] 15783 13219 EDAERREREER True PC9_epitope_Rep5 1473.6920310264902 1473.6909299358601 55.854 2 -1.879407492894128 0.4490940230612312 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 81205 25378 PKGQRIFLI True PC9_epitope_Rep2 1070.6600496403798 1070.6589499358602 103.3 2 -1.8794756102094103 0.4490940230612312 1.0 ['nc|ENSG00000176273|Q2M3R5-2|SLC35G1', 'ENSG00000176273|ENST00000427197|SLC35G1'] 135369 12542 WGRVVALL True PC9_epitope_Rep4 912.5545219426798 912.55342993586 56.063 2 -1.8794943992918351 0.4490940230612312 1.0 ['ENSG00000030110|ENST00000374467|BAK1'] 15868 25142 EDGKSAISLN True PC9_epitope_Rep1 1032.50875351872 1032.5076499358602 101.59 2 -1.8794989686700068 0.4490940230612312 1.0 ['ENSG00000150627|ENST00000508596|WDR17', 'nc|ENSG00000150627|Q8IZU2|WDR17'] 92059 18603 RKTRHVNIL True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 78.371 2 -1.8795128435046777 0.4490940230612312 1.0 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000494557.1_1_3:12632295-12633310:-|nuORF', 'ENST00000460610.1_1_3:12632295-12641253:-|nuORF', 'ENST00000465826.5_1_3:12628841-12633220:-|nuORF', 'ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1', 'ENSG00000078061|ENST00000377045|ARAF'] 106898 9253 SVDPGEPP True NCI_RA007_Epitope_Rep1 796.36029837988 796.35920993586 39.989 2 -1.879595351974529 0.4490940230612312 1.0 ['nc|ENSG00000136883|Q96FN5|KIF12', 'ENSG00000136883|ENST00000640217|KIF12'] 69116 24483 LTRIKACP True NCI_RA007_Epitope_Rep2 900.5215075622399 900.52040993586 102.85 2 -1.8797720381318697 0.4490940230612312 1.0 ['ENST00000581996.2_1_18:74204720-74204858:+|nuORF'] 129544 25532 VRLGLALV True PC9_epitope_Rep2 839.5592729699499 839.5587249679301 103.89 1 -1.8800041601435495 0.44909735478592855 1.0 ['ENST00000331872.10_1_1:182353105-182353156:-|nuORF'] 12407 16851 DITQNYKYP True PC9_epitope_Rep4 1140.5451390274397 1140.5440499358601 72.799 2 -1.8801045663899725 0.44909735478592855 1.0 ['nc|ENSG00000166947|P16452-2|EPB42', 'ENSG00000166947|ENST00000441366|EPB42', 'ENST00000567019.1_1_15:43489502-43501706:-|nuORF', 'nc|ENSG00000166947|P16452-3|EPB42'] 83720 8872 PVGLPGRPGT True PC9_epitope_Rep3 949.53451477409 949.53340993586 39.077 2 -1.8801136775196516 0.44909735478592855 1.0 ['ENST00000309957.2_2_13:111289482-111290624:+|nuORF'] 118596 4073 TYRFKQCQYLF True PC9_epitope_Rep2 1495.7282058531898 1495.72654490379 20.94 3 -1.8801432698321867 0.44909735478592855 1.0 ['ENST00000558942.5_1_15:89193512-89193848:+|nuORF'] 31411 11288 GDYTWTEFD True PC9_epitope_Rep5 1132.43491987212 1132.43382993586 48.412 2 -1.880210895073113 0.44909735478592855 1.0 ['nc|ENSG00000071539|Q15645-2|TRIP13', 'ENST00000512024.5_1_5:893053-908577:+|nuORF', 'ENSG00000071539|ENST00000166345|TRIP13'] 86455 21285 QKPKAGRH True NCI_RA007_Epitope_Rep5 920.5304324531598 920.52932993586 88.922 2 -1.8802215464610426 0.44909735478592855 1.0 ['nc|ENSG00000235927|Q8NBZ9|NEXN-AS1'] 68534 6049 LTGHLCAP True PC9_epitope_Rep3 810.40580910366 810.40470993586 28.318 2 -1.8802784855483312 0.44910336402111783 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 26761 6290 FKEWFWLERFW True NCI_RA007_Epitope_Rep1 1672.8190694629197 1672.81741490379 28.496 3 -1.8803855031185286 0.44911159345993173 1.0 ['CERS3|p.A61Gfs*11|1|0.35|ENSG00000154227|chr15:100490923-100490924|-/C|frameshift_variant', 'CERS3|p.T232Pfs*3|1|0.17|ENSG00000154227|chr15:100472969-100472969|C/-|frameshift_variant', 'ENSG00000154227|ENST00000679737|CERS3'] 68921 17802 LTPAMSPA True H1975_Epitope_Rep1 786.3945757136199 786.39402496793 74.122 1 -1.8804258082845247 0.44911159345993173 1.0 ['ENSG00000130702|ENST00000252999|LAMA5'] 10885 23687 CYGGIKKG True PC9_epitope_Rep3 824.4214591678 824.42036993586 96.398 2 -1.8806624544740527 0.44911159345993173 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.P2085Lfs*164|1|0.15|ENSG00000138829|chr5:128291567-128291567|G/-|frameshift_variant', 'FBN2|p.C2128Vfs*121|1|0.17|ENSG00000138829|chr5:128290796-128290796|G/-|frameshift_variant', 'FBN2|p.N2590Tfs*21|1|0.14|ENSG00000138829|chr5:128273911-128273911|T/-|frameshift_variant', 'FBN2|p.Q2743Sfs*52|1|0.15|ENSG00000138829|chr5:128261874-128261874|C/-|frameshift_variant', 'FBN2|p.P2723Lfs*72|1|0.19|ENSG00000138829|chr5:128263449-128263449|G/-|frameshift_variant', 'FBN2|p.G2716Afs*79|1|0.45|ENSG00000138829|chr5:128263470-128263470|C/-|frameshift_variant', 'FBN2|p.R1054Pfs*53|1|0.12|ENSG00000138829|chr5:128345413-128345413|C/-|frameshift_variant', 'FBN2|p.D1008Mfs*99|1|0.14|ENSG00000138829|chr5:128345552-128345552|C/-|frameshift_variant', 'ENST00000511489.1_1_5:127701040-127712520:-|nuORF'] 89946 22509 RDAGRRTTCSP True H1975_Epitope_Rep3 1218.58875225826 1218.58711490379 94.083 3 -1.8807253353045468 0.44911159345993173 1.0 ['ZPLD1|p.W327C|1|0.67|ENSG00000170044|chr3:102470441-102470441|G/T|missense_variant'] 9778 16125 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 71.129 2 -1.8807443403875954 0.44911159345993173 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 72282 4811 MICQGDIARY True H1975_Epitope_Rep3 1168.5368999261998 1168.53580993586 23.631 2 -1.8808384443862716 0.44911760214655005 1.0 ['ENSG00000070366|ENST00000263073|SMG6'] 49121 8344 KEITEGDEVEV True PC9_epitope_Rep3 1246.5928770655 1246.59178993586 37.065 2 -1.8809992306787526 0.44914542499700055 1.0 ['ENSG00000129245|ENST00000250113|FXR2'] 89270 11807 QVVQRWKR True PC9_epitope_Rep4 1098.6410455312998 1098.6399499358602 53.183 2 -1.8810530143206534 0.4491514331835435 1.0 ['ENST00000342992.10_3_2:179584396-179584768:-|nuORF'] 80616 21816 PGRPPKNR True NCI_RA007_Epitope_Rep3 920.53043245316 920.52932993586 94.779 2 -1.8811098176965246 0.4491574412390249 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1'] 4520 4684 AKGFTPIP True PC9_epitope_Rep1 829.4697892592098 829.46868993586 22.889 2 -1.881271007153173 0.4491634491634492 1.0 ['ENSG00000046604|ENST00000261590|DSG2'] 46781 14835 ITFPPSRAT True PC9_epitope_Rep3 988.5341804209199 988.53308993586 62.199 2 -1.8816164841912362 0.44919727772445683 1.0 ['ADGRV1|p.G210S|1|0.23|ENSG00000164199|chr5:90625199-90625199|G/A|missense_variant'] 20596 21543 EPSTIPPCRR True PC9_epitope_Rep2 1154.5866269999399 1154.58607496793 88.332 1 -1.881702144682594 0.44919727772445683 1.0 ['ENST00000537165.5_1_12:109907385-109907427:-|nuORF'] 136295 16810 WSLSYIFFP True H1975_Epitope_Rep3 1158.57498260374 1158.57334490379 70.212 3 -1.8817245177307906 0.449203285017832 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 49778 16617 KHDVAHMIV True PC9_epitope_Rep2 1048.54878493924 1048.54768993586 69.161 2 -1.8823431891058642 0.449285636383466 1.0 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 63984 17212 LNVRKAAHEAL True NCI_RA007_Epitope_Rep4 1220.6989543302398 1220.6978499358602 74.52 2 -1.8824210230858316 0.44929164258215093 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 70450 3344 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 16.966 3 -1.882576461886128 0.4492987545531878 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 6587 6568 APVMAVVR True PC9_epitope_Rep3 841.4843937775299 841.48328993586 30.287 2 -1.8826119007686901 0.4492987545531878 1.0 ['ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.A3449Pfs*12|1|0.11|ENSG00000173064|chr12:112184220-112184220|G/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4', 'ENST00000547519.1_1_12:112664623-112666579:-|nuORF'] 136100 11597 WRLLLYRERRL True NCI_RA007_Epitope_Rep1 1572.9364992569997 1572.93484490379 49.08 3 -1.8826484285932439 0.4492987545531878 1.0 ['ENSG00000180998|ENST00000321662|GPR137C'] 80460 25447 PGKRYLQVSK True PC9_epitope_Rep1 1174.6822416369398 1174.68114993586 102.87 2 -1.8828157097047815 0.4493015952632784 1.0 ['ENSG00000107815|ENST00000311916|TWNK'] 45021 24305 IPFAHPTA True PC9_epitope_Rep3 852.4493881678 852.44828993586 98.803 2 -1.8829158046252295 0.4493015952632784 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|304|2|anti-sense'] 126236 15025 VLGQGNTA True NCI_RA007_Epitope_Rep3 758.3922672145 758.39116993586 66.563 2 -1.883002552456899 0.4493015952632784 1.0 ['MAMDC2|p.L627Efs*3|1|0.07|ENSG00000165072|chr9:70218563-70218564|-/GAGGC|frameshift_variant', 'ENSG00000165072|ENST00000377182|MAMDC2'] 113226 22479 TLQNGAAV True PC9_epitope_Rep5 772.4079172786398 772.4073649679301 91.467 1 -1.8830272117706155 0.4493015952632784 1.0 ['nc|ENSG00000262246|P57737-2|CORO7', 'nc|ENSG00000262246|P57737-4|CORO7', 'ENSG00000262246|ENST00000251166|CORO7', 'nc|ENSG00000262246|P57737-3|CORO7', 'ENST00000575531.5_1_16:4407102-4412712:-|nuORF', 'ENST00000575714.5_1_16:4408319-4455566:-|nuORF'] 9769 21243 AYILEGKK True H1975_Epitope_Rep1 920.5331177917599 920.53202993586 88.257 2 -1.883049443043382 0.4493015952632784 1.0 ['ENSG00000158863|ENST00000289921|FHIP2B'] 34383 11223 GPGGKGRC True H1975_Epitope_Rep2 730.3544422371399 730.35389496793 48.212 1 -1.8831748578219136 0.4493015952632784 1.0 ['ENSG00000101200|ENST00000380293|AVP', 'ENSG00000101405|ENST00000217386|OXT'] 68114 9361 LTDPFLERITE True H1975_Epitope_Rep1 1332.6925315371197 1332.69142993586 40.914 2 -1.8831823309976812 0.4493015952632784 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 15727 23934 ECAWGCRG True H1975_Epitope_Rep2 880.3319925403998 880.33088993586 98.579 2 -1.8833584447950376 0.4493015952632784 1.0 ['ENSG00000215474|ENST00000425639|SKOR2', 'nc|ENSG00000215474|Q2VWA4-2|SKOR2'] 20190 7463 ENHRPAYW True PC9_epitope_Rep2 1071.48862721083 1071.48752993586 34.08 2 -1.8834246897884368 0.4493015952632784 1.0 ['nc|ENSG00000167670|Q13111-2|CHAF1A', 'nc|ENSG00000167670|Q13111-3|CHAF1A', 'ENSG00000167670|ENST00000301280|CHAF1A'] 35903 21601 GTQPLLKRASA True PC9_epitope_Rep2 1140.6615061923599 1140.6604099358601 88.562 2 -1.8834367680143418 0.4493015952632784 1.0 ['ENSG00000160055|ENST00000309777|TMEM234', 'nc|ENSG00000160055|Q8WY98|TMEM234', 'nc|ENSG00000160055|Q8WY98-2|TMEM234', 'ENST00000487174.1_1_1:32683125-32687629:-|nuORF', 'nc|ENSG00000160055|Q8WY98-4|TMEM234'] 39352 23615 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 98.156 3 -1.8834875416215446 0.4493015952632784 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 13602 20134 DPGLRGPLHW True NCI_RA007_Epitope_Rep4 1146.5934266325398 1146.59179490379 87.111 3 -1.8835124642542218 0.4493015952632784 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 58480 5609 LEQAVLPA True NCI_RA007_Epitope_Rep2 839.4752685624699 839.47416993586 26.434 2 -1.8835261389991151 0.4493015952632784 1.0 ['nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-2|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1'] 97270 10916 SEAFNMESVNK True H1975_Epitope_Rep3 1254.55505208814 1254.5539499358601 47.075 2 -1.8835713746140217 0.4493015952632784 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-3|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-2|PLEKHH2', 'ENST00000405223.6_1_2:43871812-43968195:+|nuORF'] 43470 15820 IGHVALRLI True PC9_epitope_Rep4 990.63383489254 990.63272993586 68.776 2 -1.883601353813181 0.4493015952632784 1.0 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 27672 19900 FPGTLDSKL True PC9_epitope_Rep2 976.5229470308799 976.52184993586 81.94 2 -1.8836823249353611 0.44930174753894625 1.0 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 133494 12066 VWFPGGAF True NCI_RA007_Epitope_Rep3 879.4279244472298 879.42682993586 54.582 2 -1.8837040893586243 0.44930174753894625 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A', 'nc|ENSG00000159398|Q6NT32-3|CES5A', 'ENST00000543561.1_1_16:67034544-67038818:+|nuORF', 'nc|ENSG00000172824|Q5XG92-7|CES4A', 'nc|ENSG00000172824|Q5XG92-6|CES4A', 'nc|ENSG00000172824|Q5XG92-5|CES4A', 'nc|ENSG00000172824|Q5XG92-8|CES4A', 'nc|ENSG00000172824|Q5XG92-2|CES4A', 'ENSG00000172824|ENST00000648724|CES4A'] 136022 14599 WRCFQWWRMDW True H1975_Epitope_Rep3 1698.7336426701397 1698.73254993586 61.522 2 -1.8837529585213302 0.44930174753894625 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 124169 7997 VGSTQPQV True NCI_RA007_Epitope_Rep3 814.41848196234 814.41738993586 38.552 2 -1.883832354423393 0.44930174753894625 1.0 ['ENSG00000196440|ENST00000423738|ARMCX4'] 113545 10430 TLTQPDRAL True PC9_epitope_Rep2 1013.5505587610498 1013.54946993586 45.439 2 -1.8839016881118085 0.44930174753894625 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3'] 95585 3412 RWVLFHFWFKN True NCI_RA007_Epitope_Rep1 1578.8248235496997 1578.8231849037902 17.172 3 -1.8841215731799197 0.44930174753894625 1.0 ['ENST00000592061.1_1_19:19738235-19738493:-|nuORF'] 4889 5398 ALETLGILN True NCI_RA007_Epitope_Rep3 942.5385970950199 942.53750993586 28.243 2 -1.8841227583087854 0.44930174753894625 1.0 ['HNRNPL|p.F561I|1|0.35|ENSG00000104824|chr19:38837414-38837414|A/T|missense_variant'] 95167 23514 RVGSHGPAL True PC9_epitope_Rep2 892.4878989348399 892.48680993586 95.919 2 -1.884133811952148 0.44930174753894625 1.0 ['ENST00000441788.6_1_19:3536644-3537031:+|nuORF'] 13772 4938 DQGPTFDYS True PC9_epitope_Rep3 1028.40870512428 1028.4076099358601 24.086 2 -1.88415039739417 0.44930174753894625 1.0 ['nc|ENSG00000158850|O60512-2|B4GALT3', 'ENST00000493164.5_1_1:161144758-161146233:-|nuORF', 'ENST00000470882.5_1_1:161143647-161146009:-|nuORF', 'ENSG00000158850|ENST00000319769|B4GALT3'] 86498 24734 QKYDRQLRL True PC9_epitope_Rep3 1218.6833042660999 1218.68220993586 100.52 2 -1.8841549930035844 0.44930174753894625 1.0 ['ENST00000562757.5_1_16:66857380-66864856:-|nuORF', 'ENST00000563419.5_1_16:66858748-66864862:-|nuORF', 'ENST00000569963.1_1_16:66860370-66864856:-|nuORF', 'ENST00000564040.6_1_16:66857135-66864856:-|nuORF', 'ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1'] 40032 10129 HPTARLLL True PC9_epitope_Rep2 919.56033559911 919.55922993586 44.299 2 -1.88421741398735 0.44930174753894625 1.0 ['nc|ENSG00000137343|Q5SQI0-7|ATAT1', 'nc|ENSG00000137343|Q5SQI0-6|ATAT1', 'nc|ENSG00000137343|Q5SQI0-5|ATAT1', 'nc|ENSG00000137343|Q5SQI0-4|ATAT1', 'nc|ENSG00000137343|Q5SQI0-3|ATAT1', 'ENSG00000137343|ENST00000330083|ATAT1', 'nc|ENSG00000137343|Q5SQI0|ATAT1'] 131403 5012 VTHPHLPR True NCI_RA007_Epitope_Rep4 955.53518348043 955.53408993586 25.763 2 -1.8843398456059786 0.44930174753894625 1.0 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE', 'ENST00000521393.1_1_14:106188133-106188816:-|nuORF'] 70443 2165 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 11.208 3 -1.8843592890618093 0.44930174753894625 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 82709 12625 PQVVRVGG True NCI_RA007_Epitope_Rep3 810.4711862415398 810.47008993586 56.904 2 -1.8843781479276227 0.44930174753894625 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 70437 1668 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 8.669 3 -1.8844666915053794 0.44930174753894625 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 69008 7515 LTPSSATLGQ True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 33.886 2 -1.8844836495669945 0.44930174753894625 1.0 ['ENSG00000114631|ENST00000342480|PODXL2'] 70447 3005 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 15.299 3 -1.8846698087355647 0.44930174753894625 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 60909 10825 LHYSGVRAL True NCI_RA007_Epitope_Rep3 1014.5610638750999 1014.55996993586 49.629 2 -1.8847026558081441 0.44930174753894625 1.0 ['ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7'] 92243 24227 RLKKKHEL True NCI_RA007_Epitope_Rep2 1050.66619764998 1050.66510993586 101.74 2 -1.8847073542796902 0.44930174753894625 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'nc|ENSG00000139220|O75334-7|PPFIA2', 'nc|ENSG00000139220|O75334-8|PPFIA2'] 102561 23284 SLVVAFICKLH True PC9_epitope_Rep5 1228.7002002002 1228.6991099358602 94.546 2 -1.8847151144890517 0.44930174753894625 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2'] 91540 19740 RIHNGQKLVV True NCI_RA007_Epitope_Rep1 1162.69347502698 1162.6923699358601 80.971 2 -1.8849396273164778 0.44932465578702946 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 37724 14563 GWEWRNQAVW True PC9_epitope_Rep4 1330.62070400954 1330.6196099358601 63.934 2 -1.8849521696717346 0.44932465578702946 1.0 ['ENST00000590278.1_1_19:33695337-33695988:+|nuORF'] 30747 15377 GALNKSTV True NCI_RA007_Epitope_Rep4 788.43921740692 788.4386649679301 66.823 1 -1.8850770731339368 0.4493257606313976 1.0 ['nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47', 'CD47|p.I86Kfs*4|1|0.03|ENSG00000196776|chr3:108080134-108080135|-/AGCTTCT|frameshift_variant'] 58722 19457 LERTNQLK True PC9_epitope_Rep6 1000.5665431783599 1000.56544993586 87.504 2 -1.8851202303469794 0.4493257606313976 1.0 ['PDZD2|p.S2678Hfs*5|1|0.32|ENSG00000133401|chr5:32098446-32098446|C/-|frameshift_variant', 'ENSG00000133401|ENST00000438447|PDZD2', 'nc|ENSG00000133401|O15018-2|PDZD2'] 70270 20427 LVRNFGYPL True PC9_epitope_Rep2 1077.5971150306498 1077.5960099358601 84.001 2 -1.8854008234258353 0.449353565744435 1.0 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 110683 12239 TGCCCACP True H1975_Epitope_Rep2 756.2063236450799 756.2057749679301 52.16 1 -1.885516625565875 0.44935956832179647 1.0 ['ENST00000525225.1_3_11:904829-908262:-|nuORF'] 65518 23968 LRPRNEQRE True PC9_epitope_Rep4 1196.63741670284 1196.63687496793 100.66 1 -1.8855855827301506 0.44936557076829164 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'TBC1D1|p.P709Hfs*44|1|0.41|ENSG00000065882|chr4:38090002-38090002|C/-|frameshift_variant'] 136055 9680 WRERWQEYFTF True H1975_Epitope_Rep3 1646.76301113878 1646.76190993586 42.253 2 -1.8856046888343627 0.44936777850446913 1.0 ['ENST00000367103.3_1_1:206907394-206907589:+|nuORF'] 103572 8038 SPSPKLRI True PC9_epitope_Rep1 896.5443511817999 896.54324993586 35.74 2 -1.8857095917619038 0.44936777850446913 1.0 ['ENST00000359451.6_1_6:110501026-110501203:-|nuORF', 'ENST00000392586.5_1_6:110499922-110501203:-|nuORF'] 112014 10304 TIRVWELDLP True H1975_Epitope_Rep1 1240.6815729306 1240.6804699358602 44.579 2 -1.8857603677195065 0.44936777850446913 1.0 ['nc|ENSG00000166596|Q8N1V2-3|CFAP52', 'ENSG00000166596|ENST00000352665|CFAP52', 'nc|ENSG00000166596|Q8N1V2-2|CFAP52', 'ENST00000576630.5_1_17:9487588-9546512:+|nuORF'] 58452 24082 LEPPAAREP True H1975_Epitope_Rep1 978.51344497634 978.51234993586 99.91 2 -1.8858345625199566 0.44936777850446913 1.0 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 37135 23741 GVQAPDWD True H1975_Epitope_Rep1 886.38209645362 886.38154496793 98.563 1 -1.8859406480799075 0.4493797824333457 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 138712 16119 YIPKPSTVSHS True NCI_RA007_Epitope_Rep5 1214.62953735774 1214.62844993586 68.73 2 -1.8859996288342837 0.4493797824333457 1.0 ['ENST00000588404.5_1_19:38907704-38910742:-|nuORF'] 110256 17898 TERLARIR True NCI_RA007_Epitope_Rep5 1013.6094110498499 1013.60830993586 75.638 2 -1.8860467172097164 0.44938088594349496 1.0 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 139571 23059 YLVNDKAA True PC9_epitope_Rep6 892.4654321547599 892.4648849679301 101.79 1 -1.8860509893095487 0.44938088594349496 1.0 ['ENSG00000164756|ENST00000456015|SLC30A8', 'SLC30A8|p.T7M|1|0.58|ENSG00000164756|chr8:117135347-117135347|C/T|missense_variant', 'SLC30A8|p.G143Vfs*12|1|0.27|ENSG00000164756|chr8:117157695-117157695|C/-|frameshift_variant'] 42241 17146 IDSSLKSK True NCI_RA007_Epitope_Rep5 876.4916469026 876.49054993586 72.724 2 -1.8864516938790057 0.4493919183993723 1.0 ['ENSG00000152580|ENST00000282466|IGSF10', 'IGSF10|p.S862Tfs*18|1|0.03|ENSG00000152580|chr3:151447398-151447399|-/CCCCAATAACAGTA|frameshift_variant'] 66262 20197 LSFEVFRSP True PC9_epitope_Rep5 1080.56039516876 1080.55928993586 82.733 2 -1.8866294896465323 0.4493919183993723 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 66789 19693 LSLSLDWRRRR True NCI_RA007_Epitope_Rep2 1456.8375134917198 1456.83640993586 81.552 2 -1.8866615758415572 0.4493919183993723 1.0 ['ENST00000586602.5_1_19:9679707-9694912:-|nuORF', 'ENST00000320451.6_1_19:9679704-9695196:-|nuORF'] 93982 25288 RRKIYHRRLR True H1975_Epitope_Rep1 1452.9014511609598 1452.90034993586 104.75 2 -1.8869695265350197 0.4493919183993723 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.G402Efs*4|1|0.39|ENSG00000106823|chr9:92510000-92510000|C/-|frameshift_variant'] 128375 18087 VPRGRKGS True NCI_RA007_Epitope_Rep5 855.50388335215 855.5033349679301 76.37 1 -1.8869836139755944 0.4493919183993723 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS'] 81268 22454 PKTKLLCKHL True PC9_epitope_Rep4 1179.71618461751 1179.71508993586 94.6 2 -1.887059057960061 0.4493919183993723 1.0 ['ENST00000519304.1_2_8:133771146-133772790:-|nuORF', 'ENST00000519187.5_2_8:133771681-133772790:-|nuORF', 'ENST00000519016.5_2_8:133771146-133772850:-|nuORF'] 97048 12003 SDAPLEEARQF True H1975_Epitope_Rep1 1261.5938801250097 1261.59278993586 51.177 2 -1.8870779465835255 0.4493919183993723 1.0 ['ENSG00000144224|ENST00000272638|UBXN4'] 120072 4938 VDTISYGEF True PC9_epitope_Rep3 1029.46549172441 1029.46438993586 24.086 2 -1.8871080521673949 0.4493919183993723 1.0 ['TPRG1L|p.S205Ifs*52|1|0.34|ENSG00000158109|chr1:3627639-3627640|-/C|frameshift_variant', 'ENSG00000158109|ENST00000378344|TPRG1L'] 70724 955 LWRMLKEEDA True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 5.1845 3 -1.8871486136285436 0.4493919183993723 1.0 ['ENST00000541110.5_2_6:42330765-42418997:-|nuORF'] 27112 19557 FLHLLMKLPL True H1975_Epitope_Rep3 1223.74642211663 1223.7453299358601 81.944 2 -1.8871667890522354 0.4493919183993723 1.0 ['ENST00000342435.8_1_3:146233569-146233638:-|nuORF'] 137938 24112 YFEGIHLD True H1975_Epitope_Rep1 992.46034677432 992.45924993586 100.03 2 -1.887546964598166 0.4493919183993723 1.0 ['ENSG00000176208|ENST00000321990|ATAD5'] 73570 6367 MVTAETAEAS True PC9_epitope_Rep1 1008.4433763808399 1008.4422699358599 29.3 2 -1.8876072185829127 0.4493919183993723 1.0 ['ENSG00000197410|ENST00000357232|DCHS2'] 108405 22982 SYLLAERDLY True PC9_epitope_Rep5 1241.62920300457 1241.62810993586 93.39 2 -1.887609097653824 0.4493919183993723 1.0 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 122318 19477 VGCGFCGK True NCI_RA007_Epitope_Rep4 769.3251162548099 769.3245649679301 84.184 1 -1.8876346207832957 0.4493919183993723 1.0 ['ENSG00000135220|ENST00000251566|UGT2A3'] 60057 13808 LGLELRPEA True PC9_epitope_Rep1 996.5603951687599 996.55928993586 57.956 2 -1.8876757128384434 0.4493919183993723 1.0 ['ENSG00000142327|ENST00000270357|RNPEPL1'] 123455 17595 VGNYVSELRF True PC9_epitope_Rep4 1182.6033226099 1182.6022299358601 75.693 2 -1.8877006115788197 0.4493919183993723 1.0 ['nc|ENSG00000088367|Q9H4G0-4|EPB41L1', 'EPB41L1|p.E714Afs*9|1|0.13|ENSG00000088367|chr20:36212330-36212340|CGGAGGCCGTA/-|frameshift_variant', 'nc|ENSG00000088367|Q9H4G0-3|EPB41L1', 'nc|ENSG00000088367|Q9H4G0-2|EPB41L1', 'EPB41L1|p.D833Gfs*2|1|0.42|ENSG00000088367|chr20:36221917-36221918|-/G|frameshift_variant', 'ENSG00000088367|ENST00000338074|EPB41L1'] 80542 6215 PGPLSKQGS True NCI_RA007_Epitope_Rep5 869.46068112749 869.45958993586 30.582 2 -1.8877280188021879 0.4493919183993723 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 99508 5635 SIDLTYDIQSF True NCI_RA007_Epitope_Rep2 1300.61869789052 1300.6176099358602 26.532 2 -1.8878544859165722 0.4493919183993723 1.0 ['ENSG00000218823|ENST00000404991|PAPOLB'] 100439 15929 SLAGEKMP True H1975_Epitope_Rep2 831.41603943419 831.41549496793 66.471 1 -1.887909437445887 0.4493919183993723 1.0 ['ENST00000607322.1_1_9:99973694-100000842:-|nuORF'] 36095 10134 GVAFLGPP True NCI_RA007_Epitope_Rep1 756.4170254103599 756.4164749679301 43.429 1 -1.8879395959270533 0.4493919183993723 1.0 ['ACACB|p.R2183Dfs*8|1|0.32|ENSG00000076555|chr12:109260528-109260528|T/-|frameshift_variant', 'nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.S901Ffs*17|1|0.28|ENSG00000076555|chr12:109199474-109199475|-/T|frameshift_variant', 'ACACB|p.S376I|1|0.3|ENSG00000076555|chr12:109174141-109174141|G/T|missense_variant'] 96373 23759 RYVKIKMR True PC9_epitope_Rep1 1092.6590040945598 1092.65790993586 96.184 2 -1.888150140729677 0.4494034323072732 1.0 ['ENST00000514355.5_1_3:129112485-129117890:-|nuORF'] 122656 14469 VGGCPGDD True NCI_RA007_Epitope_Rep5 718.25920443962 718.25865496793 62.336 1 -1.8881718318077874 0.4494034323072732 1.0 ['ENST00000426654.6_1_16:69599384-69602431:+|nuORF'] 103059 9393 SPGENGSPGP True H1975_Epitope_Rep2 897.3828247296099 897.38227496793 41.095 1 -1.888187495981157 0.4494034323072732 1.0 ['ENSG00000139219|ENST00000380518|COL2A1', 'nc|ENSG00000139219|P02458-1|COL2A1'] 59363 25198 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 108.9 2 -1.8882358609763896 0.4494034323072732 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 70429 1107 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 5.7843 3 -1.8882629967270121 0.4494034323072732 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 70433 1378 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 7.1756 3 -1.8885626649326757 0.4494034323072732 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 68761 2955 LTLEMHLFTW True NCI_RA007_Epitope_Rep1 1289.64783027417 1289.64619490379 15.343 3 -1.8887205625977597 0.4494034323072732 1.0 ['ENST00000394434.6_1_5:145524232-145529192:-|nuORF'] 62908 23928 LLPAAKGK True NCI_RA007_Epitope_Rep3 796.5170738047999 796.5165249679301 103.67 1 -1.888740436466987 0.4494034323072732 1.0 ['GREM1|p.E23K|1|0.19|ENSG00000166923|chr15:32730757-32730757|G/A|missense_variant'] 53753 24580 KSRRKVVLF True H1975_Epitope_Rep2 1131.7240468792697 1131.72241490379 101.1 3 -1.8887910686245615 0.4494034323072732 1.0 ['ENST00000479285.5_1_1:114438325-114438811:-|nuORF'] 18619 6408 EKSRWEVLQQE True H1975_Epitope_Rep1 1430.71539224002 1430.71428993586 29.708 2 -1.88904801365815 0.4494034323072732 1.0 ['nc|ENSG00000120370|Q5T7V8-2|GORAB', 'ENSG00000120370|ENST00000367763|GORAB'] 38654 18024 HFPEVMLG True PC9_epitope_Rep5 928.4476739156399 928.44656993586 74.346 2 -1.8891022773286712 0.4494034323072732 1.0 ['nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'ENST00000504496.5_1_5:136997591-137028142:-|nuORF', 'ENST00000504208.5_1_5:136964069-137033992:-|nuORF'] 43771 24090 IHLILGSILD True H1975_Epitope_Rep2 1092.6542955536002 1092.6531899358602 99.195 2 -1.8891272990052057 0.44940943165969316 1.0 ['ENST00000470339.1_1_X:107683355-107812096:+|nuORF'] 100382 21439 SKTSGKAK True PC9_epitope_Rep5 805.4657665079299 805.46466993586 87.522 2 -1.8894176627864645 0.44941543088137553 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 61563 23327 LKIVHILNMT True H1975_Epitope_Rep2 1180.7002002002 1180.6991099358602 96.195 2 -1.890035680845002 0.4494547276906819 1.0 ['ENSG00000213341|ENST00000370397|CHUK'] 28436 17982 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 75.954 2 -1.8900426390274243 0.4494547276906819 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 91948 24795 RKNIDIWRKH True NCI_RA007_Epitope_Rep1 1364.77893598644 1364.7778299358602 102.65 2 -1.8901062989113218 0.4494547276906819 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1'] 13146 5041 DLRHFQIIWNM True NCI_RA007_Epitope_Rep2 1471.7394392432298 1471.73779490379 24.233 3 -1.8901230519310293 0.4494547276906819 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 136297 17254 WSLSYIFFP True NCI_RA007_Epitope_Rep3 1158.57498260374 1158.57334490379 75.758 3 -1.8901284910409997 0.4494547276906819 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 48640 26210 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 106.88 3 -1.8901671995790903 0.4494547276906819 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 48572 3817 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 19.284 3 -1.8902090777374068 0.4494547276906819 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 79709 7566 PDTIMPSSSS True H1975_Epitope_Rep3 1020.4433763808402 1020.4422699358599 34.083 2 -1.8902383065637014 0.4494547276906819 1.0 ['ENSG00000102313|ENST00000218436|ITIH6', 'ITIH6|p.S731Qfs*9|1|0.37|ENSG00000102313|chrX:54757884-54757884|G/-|frameshift_variant'] 128027 16442 VPKDRLSL True PC9_epitope_Rep5 926.5549158654999 926.55380993586 68.242 2 -1.8903050015933585 0.4494547276906819 1.0 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 120755 23241 VEKRMLLKF True PC9_epitope_Rep1 1162.6896355164997 1162.6890749679299 94.187 1 -1.8903352306831684 0.4494547276906819 1.0 ['CHML|p.M298L|1|0.16|ENSG00000203668|chr1:241634875-241634875|T/A|missense_variant'] 119787 23847 VCKQCEAH True NCI_RA007_Epitope_Rep2 916.38950741652 916.38840993586 100.13 2 -1.8903678168672684 0.4494547276906819 1.0 ['ENST00000468633.1_1_10:23408104-23409788:+|nuORF', 'ENSG00000148450|ENST00000376510|MSRB2'] 116405 24106 TTIRKYVV True NCI_RA007_Epitope_Rep5 978.5862159937799 978.58510993586 100.13 2 -1.8904297652086786 0.4494547276906819 1.0 ['ENSG00000124429|ENST00000262753|POF1B', 'nc|ENSG00000124429|Q8WVV4-1|POF1B', 'POF1B|p.C188Afs*55|1|0.08|ENSG00000124429|chrX:85346021-85346021|A/-|frameshift_variant', 'nc|ENSG00000124429|Q8WVV4-3|POF1B', 'POF1B|p.S407Ffs*12|1|0.18|ENSG00000124429|chrX:85306275-85306278|AGAG/-|frameshift_variant'] 18462 8205 EKAISVTFT True H1975_Epitope_Rep2 994.53351171458 994.53240993586 36.514 2 -1.8906087392321873 0.4494716200021789 1.0 ['ENSG00000176200|ENST00000313253|OR4D11'] 83357 9439 PTGAFGKE True PC9_epitope_Rep4 805.39701824177 805.39592993586 43.918 2 -1.8906461154304153 0.4494836151298588 1.0 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 94948 25071 RTKFRRAM True PC9_epitope_Rep2 1064.6025518475997 1064.60144993586 102.1 2 -1.8907227982684758 0.4494836151298588 1.0 ['ENST00000446716.5_1_2:220075515-220081188:-|nuORF', 'nc|ENSG00000115657|Q9NP58-4|ABCB6', 'ENSG00000115657|ENST00000265316|ABCB6', 'ENST00000497882.5_1_2:220079083-220079278:-|nuORF'] 85392 5683 QEVGVVHIF True NCI_RA007_Epitope_Rep2 1026.5498304850598 1026.5487299358601 26.719 2 -1.890759267298702 0.449489612497685 1.0 ['ENSG00000198108|ENST00000305031|CHSY3'] 123527 14508 VGPNGSGK True NCI_RA007_Epitope_Rep3 714.36605246666 714.3655049679301 64.374 1 -1.8908465914399104 0.44950650369305184 1.0 ['nc|ENSG00000168394|Q03518-2|TAP1', 'ENSG00000168394|ENST00000354258|TAP1', 'ENST00000487296.1_1_6:32815233-32815866:-|nuORF', 'ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 36806 7077 GVLEEAEFY True PC9_epitope_Rep5 1055.4811417885498 1055.48004993586 32.188 2 -1.890964577287325 0.4495184975380191 1.0 ['ENSG00000167977|ENST00000301738|KCTD5', 'ENSG00000180901|ENST00000322444|KCTD2', 'nc|ENSG00000100379|Q8N5Z5-2|KCTD17', 'ENSG00000100379|ENST00000403888|KCTD17'] 92045 17761 RKSKKTEK True NCI_RA007_Epitope_Rep5 1003.6138277239498 1003.61272993586 75.103 2 -1.891022860350567 0.4495184975380191 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 34192 21764 GNGVLQVS True PC9_epitope_Rep4 772.40791727864 772.40682993586 91.91 2 -1.8911945841152922 0.44952449426451846 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 16907 613 EFMRSDHLKQ True PC9_epitope_Rep2 1289.61865540421 1289.61700490379 3.4709 3 -1.8912040091673314 0.4495255939607185 1.0 ['ENSG00000171872|ENST00000372299|KLF17'] 110489 7546 TFGGLGSL True PC9_epitope_Rep3 750.39120458534 750.39010993586 34.025 2 -1.8912861981693234 0.4495255939607185 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 137941 23075 YFEGIHLD True PC9_epitope_Rep6 992.46034677432 992.45924993586 101.86 2 -1.8917430254087668 0.4495528760796872 1.0 ['ENSG00000176208|ENST00000321990|ATAD5'] 82882 17307 PRWKRERRTEH True NCI_RA007_Epitope_Rep2 1549.83382509361 1549.83272993586 72.057 2 -1.8919006382202357 0.4495528760796872 1.0 ['ENST00000591270.1_1_17:49270805-49337516:-|nuORF'] 120399 7682 VEELKNAIH True H1975_Epitope_Rep2 1051.56620882519 1051.5651099358602 34.501 2 -1.8919372346846541 0.4495528760796872 1.0 ['nc|ENSG00000150676|Q8IWF9-2|CCDC83', 'nc|ENSG00000150676|Q8IWF9-3|CCDC83', 'ENSG00000150676|ENST00000342404|CCDC83'] 94028 27086 RRKPRLTHWRT True H1975_Epitope_Rep2 1505.8803813632098 1505.87872490379 111.8 3 -1.8919642032454058 0.4495528760796872 1.0 ['ENST00000380008.1_1_21:47251066-47256320:-|nuORF'] 113542 7193 TLTQNQAF True NCI_RA007_Epitope_Rep4 921.4555957470498 921.45448993586 34.293 2 -1.892034435950717 0.4495528760796872 1.0 ['ENSG00000150627|ENST00000508596|WDR17', 'nc|ENSG00000150627|Q8IZU2|WDR17'] 1628 21052 AEFLVKSK True NCI_RA007_Epitope_Rep4 920.53311779176 920.53202993586 91.264 2 -1.892101107527538 0.4495528760796872 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 112659 10035 TLFPQFRAP True PC9_epitope_Rep1 1075.5814649665099 1075.58036993586 43.467 2 -1.8921317121151167 0.4495528760796872 1.0 ['QSER1|p.L151F|1|0.16|ENSG00000060749|chr11:32932098-32932098|G/T|missense_variant'] 139728 10698 YNSDEIRP True NCI_RA007_Epitope_Rep5 992.45632402304 992.45522993586 47.784 2 -1.8922008853874674 0.4495528760796872 1.0 ['nc|ENSG00000203666|Q5VUJ9|EFCAB2'] 41668 13350 IAGFPDPV True NCI_RA007_Epitope_Rep2 814.4225047136199 814.4219549679301 56.566 1 -1.892202792131319 0.4495528760796872 1.0 ['CON__Q2TBQ1'] 37707 16572 GVYRNPAFFF True PC9_epitope_Rep6 1216.6029286870796 1216.60182993586 76.185 2 -1.8922177862476195 0.4495528760796872 1.0 ['ENST00000569939.5_2_16:10481277-10522815:+|nuORF'] 34089 7811 GLYDEKPLTFF True NCI_RA007_Epitope_Rep2 1328.66525416012 1328.66414993586 35.012 2 -1.892289744886127 0.44955887158261626 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 105469 8366 SRVSQHQVPV True H1975_Epitope_Rep3 1135.60980497267 1135.6087099358601 37.163 2 -1.8923416789230392 0.449559970374243 1.0 ['ENSG00000260220|ENST00000638797|CCDC187', 'nc|ENSG00000260220|A0A096LP49-2|CCDC187', 'nc|ENSG00000260220|A0A096LP49|CCDC187'] 84003 10117 PVSTRAALVPA True NCI_RA007_Epitope_Rep3 1080.6291434349198 1080.6280499358602 46.884 2 -1.8923434701667345 0.449559970374243 1.0 ['ENSG00000145217|ENST00000398516|SLC26A1'] 35469 6591 GSISLFRPP True H1975_Epitope_Rep2 972.53926580136 972.53816993586 30.264 2 -1.8923550976345809 0.4495659656039994 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 124269 11988 VGTLGDAVP True PC9_epitope_Rep1 827.4388830537499 827.43833496793 50.975 1 -1.8928774824473162 0.4496248134958234 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17', 'nc|ENSG00000092096|Q8WUG5-3|SLC22A17', 'ENST00000557699.5_1_14:23818379-23821759:-|nuORF'] 104390 24520 SQKPSVLLTLR True PC9_epitope_Rep4 1240.7503211967598 1240.74922993586 102.8 2 -1.8930407231058868 0.4496248134958234 1.0 ['nc|ENSG00000124299|P12955-3|PEPD', 'ENST00000570572.1_1_17:53638398-53638659:-|nuORF', 'ENST00000590408.1_1_19:33953899-34001945:-|nuORF', 'nc|ENSG00000124299|P12955-2|PEPD', 'ENSG00000124299|ENST00000244137|PEPD'] 43597 14224 IGTLVQLHHRY True H1975_Epitope_Rep2 1335.74115349539 1335.74004993586 59.862 2 -1.8930756415720627 0.4496248134958234 1.0 ['ENSG00000166073|ENST00000561100|GPR176', 'nc|ENSG00000166073|Q14439-3|GPR176', 'nc|ENSG00000166073|Q14439-2|GPR176'] 17902 8850 EIAEAYLG True PC9_epitope_Rep1 864.4228986364399 864.42180993586 38.882 2 -1.8931828708642855 0.4496248134958234 1.0 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 135671 25139 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 105.87 3 -1.8932492417941151 0.4496248134958234 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 27693 8796 FPLALAGP True H1975_Epitope_Rep3 784.4483255386399 784.44722993586 38.84 2 -1.8932781414560258 0.4496248134958234 1.0 ['ENSG00000169083|ENST00000374690|AR', 'nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF'] 88388 17489 QSLGHRRR True NCI_RA007_Epitope_Rep5 1008.5689432202 1008.56784993586 74.062 2 -1.8933560530372078 0.4496248134958234 1.0 ['ENST00000283921.4_1_7:27211779-27213458:-|nuORF'] 111394 16780 THSGERPFNC True H1975_Epitope_Rep2 1146.4876412346598 1146.48598490379 69.789 3 -1.8934412918021266 0.4496248134958234 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 83816 19933 PVLLKILSQQ True NCI_RA007_Epitope_Rep5 1137.71214478289 1137.71050490379 83.586 3 -1.8935705504449716 0.44964169806800114 1.0 ['ENSG00000117000|ENST00000372771|RLF'] 83504 17664 PTSPAPHRP True PC9_epitope_Rep1 958.49846361854 958.49736993586 72.739 2 -1.8936519712377624 0.4496585822724154 1.0 ['nc|ENSG00000077463|Q8N6T7-2|SIRT6', 'ENSG00000077463|ENST00000337491|SIRT6'] 122707 20457 VGGGQGQP True PC9_epitope_Rep6 698.33475233838 698.3342049679301 91.403 1 -1.893730613695176 0.449664575710054 1.0 ['nc|ENSG00000132677|Q9H310-3|RHBG'] 31344 18832 GDNNEEDP True PC9_epitope_Rep2 888.3097193589999 888.30862993586 77.806 2 -1.8939084701005948 0.44968745235554203 1.0 ['ARHGEF12|p.D1155N|1|0.11|ENSG00000196914|chr11:120477457-120477457|G/A|missense_variant'] 48593 28090 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 118.59 3 -1.8939878172656892 0.44968745235554203 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 125802 25328 VKVPQLAL True PC9_epitope_Rep2 866.5589386167799 866.5583949679301 103.1 1 -1.8940783158110273 0.4496934452829778 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 116199 7143 TSYAVWATS True PC9_epitope_Rep3 984.4552613938799 984.45416993586 32.488 2 -1.8942273624558605 0.4496994380798885 1.0 ['ENSG00000109736|ENST00000355443|MFSD10'] 125801 25782 VKVPQLAL True PC9_epitope_Rep1 866.5589386167799 866.5583949679301 104.24 1 -1.8943268063339191 0.4497054307462784 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 31959 23984 GEPHRRRRK True PC9_epitope_Rep2 1190.6857043079397 1190.6840549037902 97.749 3 -1.8944110495764435 0.44971851077499375 1.0 ['ENSG00000187553|ENST00000651965|CYP26C1'] 137951 6292 YFFPHPIRTIL True PC9_epitope_Rep2 1402.7761420217796 1402.77448490379 29.6 3 -1.8945039187309287 0.44971851077499375 1.0 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2'] 81376 3829 PLDLYSGN True PC9_epitope_Rep4 877.41814760917 877.41704993586 20.898 2 -1.8946718643210683 0.44971851077499375 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 125800 25076 VKVPQLAL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.5583949679301 103.96 1 -1.894677518891204 0.44971851077499375 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 30418 19050 GAEPTIRNTD True PC9_epitope_Rep1 1072.51490152832 1072.51380993586 78.067 2 -1.8947182129446354 0.44973539212056535 1.0 ['ENSG00000107854|ENST00000371627|TNKS2', 'TNKS2|p.G157V|1|0.21|ENSG00000107854|chr10:91817179-91817179|G/T|missense_variant'] 125806 24865 VKVPQLAL True PC9_epitope_Rep4 866.5589386167799 866.5583949679301 104.16 1 -1.8947446534882317 0.4497582647327845 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 126895 15112 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 63.385 2 -1.8947651077792376 0.4497582647327845 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 41475 3258 HYLEFEKTRYE True NCI_RA007_Epitope_Rep2 1513.7201432672898 1513.71850490379 17.329 3 -1.8949863761025039 0.4497642562365931 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 22317 22634 ETDLRILGCEL True NCI_RA007_Epitope_Rep5 1260.6383877892797 1260.63673490379 94.244 3 -1.8952135422956609 0.44979202508765437 1.0 ['ENSG00000163660|ENST00000295926|CCNL1', 'nc|ENSG00000163660|Q9UK58-6|CCNL1', 'nc|ENSG00000163660|Q9UK58-4|CCNL1', 'nc|ENSG00000163660|Q9UK58-5|CCNL1', 'ENST00000471044.1_1_3:156876653-156877916:-|nuORF', 'ENST00000466101.1_1_3:156877139-156877916:-|nuORF'] 94869 9430 RSYQELVKVW True PC9_epitope_Rep5 1306.7033710043397 1306.70173490379 41.227 3 -1.895475359025941 0.4498012956611683 1.0 ['ENSG00000178401|ENST00000549441|DNAJC22'] 19987 6220 ELWPSFSSL True PC9_epitope_Rep4 1064.51786165044 1064.51676993586 30.971 2 -1.8955612465493834 0.4498012956611683 1.0 ['ENST00000451871.1_1_13:42499863-42500601:+|nuORF'] 121589 24193 VFFDVLGLF True PC9_epitope_Rep5 1055.56916894731 1055.5680699358602 98.052 2 -1.8955642107248845 0.4498012956611683 1.0 ['ENSG00000099219|ENST00000339450|ERMP1', 'nc|ENSG00000099219|Q7Z2K6-2|ERMP1'] 81206 15884 PKGRAPPR True NCI_RA007_Epitope_Rep4 877.5246187967299 877.52352993586 68.967 2 -1.8955935123913301 0.4498012956611683 1.0 ['nc|ENSG00000125746|O95834-2|EML2', 'nc|ENSG00000125746|O95834-3|EML2', 'ENST00000585386.1_1_19:46145287-46148597:-|nuORF'] 15865 12805 EDGGGGGR True H1975_Epitope_Rep1 703.28853042195 703.28798496793 54.318 1 -1.895684471491014 0.4498012956611683 1.0 ['ENST00000294428.7_1_1:65210812-65211007:+|nuORF'] 140482 8885 YRKFRFWNWGL True PC9_epitope_Rep4 1571.8149871419896 1571.81335490379 41.708 3 -1.8957312434451417 0.4498012956611683 1.0 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 70448 3073 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 15.641 3 -1.8957857583351054 0.4498012956611683 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 66908 9676 LSNNEQHFTEV True NCI_RA007_Epitope_Rep5 1316.5996937814402 1316.5985899358602 43.854 2 -1.8958475232170127 0.4498034818016527 1.0 ['nc|ENSG00000143514|Q13625|TP53BP2', 'ENSG00000143514|ENST00000343537|TP53BP2', 'TP53BP2|p.N110Ifs*8|1|0.06|ENSG00000143514|chr1:223810474-223810475|-/A|frameshift_variant', 'ENST00000472180.1_1_1:224001936-224033382:-|nuORF'] 137266 24124 YCKPKTLNF True PC9_epitope_Rep4 1112.56885167748 1112.56774993586 101.28 2 -1.8958617096959052 0.4498034818016527 1.0 ['ENST00000509080.5_1_5:180629908-180630064:+|nuORF'] 48739 6872 KDEVRYEVNCS True NCI_RA007_Epitope_Rep2 1340.6030649097197 1340.60196993586 31.346 2 -1.8958695876755878 0.4498034818016527 1.0 ['GCNT4|p.F378Sfs*21|1|0.19|ENSG00000176928|chr5:75028905-75028905|A/-|frameshift_variant', 'ENSG00000176928|ENST00000652361|GCNT4'] 135775 12809 WMPDSQCKECY True PC9_epitope_Rep1 1388.51992953272 1388.5188299358601 54.145 2 -1.8958714156104222 0.4498034818016527 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE'] 98765 9024 SGHRKKVGK True NCI_RA007_Epitope_Rep2 995.5988463661498 995.59774993586 39.702 2 -1.8960016971381055 0.4498094719651606 1.0 ['ENST00000336557.9_1_14:24777962-24779637:-|nuORF'] 37898 10435 GYSEIDTWSL True PC9_epitope_Rep2 1169.52406922969 1169.5229699358601 45.458 2 -1.8964242273611094 0.4498807851847013 1.0 ['ENST00000413990.1_1_1:158146374-158146917:-|nuORF'] 136479 23141 WVPPPAEN True H1975_Epitope_Rep1 908.43921740692 908.43812993586 96.213 2 -1.8964850588468873 0.44988187647654404 1.0 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4'] 38008 24607 HALSDCGD True NCI_RA007_Epitope_Rep5 816.3072172612 816.30610993586 102.12 2 -1.896617239140765 0.44988187647654404 1.0 ['ENSG00000172172|ENST00000306185|MRPL13'] 6212 6264 APPGQRLCV True PC9_epitope_Rep4 939.49602109039 939.49492993586 31.148 2 -1.8966973131012523 0.4498878655257256 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF'] 3067 16936 AFVKKGMP True NCI_RA007_Epitope_Rep2 876.4891448047998 876.48859496793 70.615 1 -1.8972881402441655 0.44992978521897214 1.0 ['ENST00000344204.8_1_5:14387586-14387625:+|nuORF'] 67545 7241 LSTPPPPA True NCI_RA007_Epitope_Rep2 778.42250471362 778.42140993586 32.785 2 -1.8973251278416359 0.44992978521897214 1.0 ['ENSG00000120279|ENST00000367245|MYCT1'] 110326 22217 TETKVTKTVKT True PC9_epitope_Rep6 1234.7132669816997 1234.7121699358602 98.414 2 -1.8974327373724036 0.44992978521897214 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000487793.5_1_22:19968732-19974706:-|nuORF', 'ENST00000473551.5_1_22:19968732-19978281:-|nuORF'] 36859 13706 GVLKPGPELLA True NCI_RA007_Epitope_Rep1 1092.6542955536 1092.6531899358602 57.328 2 -1.897710976270052 0.44992978521897214 1.0 ['ENSG00000112992|ENST00000344920|NNT', 'ENST00000513390.1_1_5:43651911-43653344:+|nuORF'] 49826 17556 KHRVEDMQ True NCI_RA007_Epitope_Rep4 1041.50256302281 1041.50146993586 75.978 2 -1.8978398888277532 0.44992978521897214 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'FAM184A|p.K1048Vfs*7|1|0.04|ENSG00000111879|chr6:118961960-118961961|-/TTTTAAC|frameshift_variant', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A', 'FAM184A|p.K640*|1|0.36|ENSG00000111879|chr6:119003520-119003521|-/A|frameshift_variant'] 23156 18713 EVKVLVAEP True PC9_epitope_Rep6 982.5698972232998 982.56880993586 84.622 2 -1.8978474437241108 0.44992978521897214 1.0 ['nc|ENSG00000156042|Q5T0N1-2|CFAP70', 'nc|ENSG00000156042|Q5T0N1|CFAP70', 'ENSG00000156042|ENST00000355577|CFAP70', 'ENST00000493787.5_1_10:75082782-75108210:-|nuORF'] 28144 3410 FRDEMVNRIWQ True NCI_RA007_Epitope_Rep1 1492.7245174550799 1492.72288490379 17.164 3 -1.8978941762365635 0.44992978521897214 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 7795 7677 ASTLIFFL True PC9_epitope_Rep4 910.51640509846 910.51530993586 36.909 2 -1.8979582847351457 0.44993577322505496 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 46494 23397 ISVPLCPLYLR True PC9_epitope_Rep2 1272.72641494804 1272.7253099358602 95.471 2 -1.898002252939817 0.4499417611007696 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 86765 25692 QLLLLLQA True PC9_epitope_Rep1 910.5851533646199 910.5846049679301 103.86 1 -1.8980802637936138 0.44995863450317863 1.0 ['ENST00000579329.1_1_17:61776101-61776257:-|nuORF'] 80165 24371 PFSTLHWRLLW True PC9_epitope_Rep2 1454.78229003138 1454.78118993586 99.311 2 -1.8981963314105628 0.44995972394574707 1.0 ['ENST00000473720.5_1_2:130913661-130934206:-|nuORF'] 118976 8460 VAEAWARL True PC9_epitope_Rep2 914.4974009893798 914.49630993586 37.909 2 -1.898426230103922 0.44995972394574707 1.0 ['ENSG00000167553|ENST00000301072|TUBA1C'] 81269 23170 PKTKLLCKHL True PC9_epitope_Rep5 1179.71618461751 1179.71508993586 94.108 2 -1.8988387160559492 0.44998802760181983 1.0 ['ENST00000519304.1_2_8:133771146-133772790:-|nuORF', 'ENST00000519187.5_2_8:133771681-133772790:-|nuORF', 'ENST00000519016.5_2_8:133771146-133772850:-|nuORF'] 139398 15696 YLNNKKTQQRR True PC9_epitope_Rep5 1447.80079362983 1447.7996899358602 65.383 2 -1.8990024337965756 0.44998802760181983 1.0 ['ENST00000461502.1_1_13:32999968-33006966:-|nuORF'] 80485 4900 PGLNPRIQA True NCI_RA007_Epitope_Rep3 964.54541381096 964.54430993586 26.265 2 -1.8990791003816223 0.44998802760181983 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.E939Sfs*27|1|0.29|ENSG00000077063|chr7:117767144-117767144|C/-|frameshift_variant'] 83432 18258 PTMIRAFPAN True PC9_epitope_Rep2 1116.5749996870798 1116.57390993586 75.55 2 -1.899201503150911 0.44998802760181983 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 65913 11643 LSDPSWRLI True PC9_epitope_Rep2 1085.58694426977 1085.58584993586 50.11 2 -1.8992180483135124 0.44998802760181983 1.0 ['ENST00000393085.3_1_7:135613585-135613720:-|nuORF'] 130050 12163 VSCHRRRFI True NCI_RA007_Epitope_Rep4 1172.63491460504 1172.6338099358602 53.784 2 -1.8992189984408723 0.44998802760181983 1.0 ['LINGO2|p.L48F|1|0.8|ENSG00000174482|chr9:27950528-27950528|C/A|missense_variant'] 102756 1496 SNDQDDDD True NCI_RA007_Epitope_Rep4 922.2788131535399 922.27770993586 8.3742 2 -1.8992590197315686 0.44998802760181983 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-9|DST'] 48642 26340 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 107.56 3 -1.8993532558200674 0.44998802760181983 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 52654 23757 KLTEILELLV True NCI_RA007_Epitope_Rep3 1169.72712614069 1169.7260299358602 102.98 2 -1.8993900252695368 0.44998802760181983 1.0 ['ENSG00000125633|ENST00000376300|CCDC93'] 33815 20590 GLLVVGLG True PC9_epitope_Rep3 726.4639756027799 726.4634249679301 84.465 1 -1.8994641203769338 0.44998802760181983 1.0 ['ENSG00000149489|ENST00000278833|ROM1'] 113952 18998 TPAFDKPK True H1975_Epitope_Rep1 902.4861675993399 902.48506993586 79.206 2 -1.8995121925474916 0.44998802760181983 1.0 ['ENSG00000196839|ENST00000372874|ADA', 'ENST00000545776.5_1_20:43255095-43280248:-|nuORF', 'ENST00000492931.5_1_20:43251503-43280248:-|nuORF'] 119411 18775 VAQKVKPNL True PC9_epitope_Rep5 995.6127650947899 995.61166993586 77.231 2 -1.8995282263572526 0.44998802760181983 1.0 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000484203.5_1_2:86348636-86354493:+|nuORF', 'ENST00000480102.1_1_2:86352635-86354493:+|nuORF', 'ENST00000594883.1_1_19:57687347-57687830:+|nuORF'] 10284 24518 CCLLVCVL True H1975_Epitope_Rep3 864.4271387952 864.42604993586 102.04 2 -1.8998195778629126 0.4499891162385721 1.0 ['UCN3|p.A140Gfs*?|1|0.25|ENSG00000178473|chr10:5374134-5374135|-/A|frameshift_variant'] 126893 14727 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 61.915 2 -1.8998343315651753 0.4499891162385721 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 1103 7623 AEALTSAW True H1975_Epitope_Rep3 847.40758292547 847.40648993586 34.303 2 -1.8998769428986018 0.44999510236066215 1.0 ['ENST00000423996.5_1_3:183963275-183963540:-|nuORF'] 12210 15551 DIGKDVIGLR True PC9_epitope_Rep5 1084.6240580544797 1084.62296993586 64.827 2 -1.899944312522576 0.44999619080787523 1.0 ['COPA|p.E1208D|1|0.15|ENSG00000122218|chr1:160290208-160290208|C/G|missense_variant'] 61406 11889 LITPLAFA True NCI_RA007_Epitope_Rep1 844.50584041476 844.50474993586 50.228 2 -1.8999522807830413 0.44999619080787523 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 39768 14086 HLWGQDIAK True H1975_Epitope_Rep1 1066.55597849466 1066.55488993586 59.348 2 -1.9002022432708412 0.45001904554606303 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|138|3|sense'] 10375 22793 CGLKFLLAVR True PC9_epitope_Rep4 1118.6634207686598 1118.66232993586 95.894 2 -1.9002084731682856 0.45001904554606303 1.0 ['DMXL1|p.G2733Afs*6|1|0.2|ENSG00000172869|chr5:119221064-119221064|G/-|frameshift_variant', 'nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 62192 8287 LLEPPAPG True NCI_RA007_Epitope_Rep2 792.4381547777599 792.43704993586 36.874 2 -1.900245340753027 0.45002013342474995 1.0 ['ENSG00000166189|ENST00000299238|HPS6'] 25922 26756 FFRLFRSTVK True PC9_epitope_Rep1 1299.74517624667 1299.74353490379 108.8 3 -1.9003090031924177 0.45002013342474995 1.0 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 79773 14863 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 63.841 2 -1.900433471514098 0.4500282940843599 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 20022 19456 ELYREAPI True PC9_epitope_Rep2 989.5181960036098 989.51708993586 80.219 2 -1.9004476881804255 0.4500282940843599 1.0 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 139244 22896 YLHKVLRF True PC9_epitope_Rep2 1074.6338348925399 1074.6327299358602 93.573 2 -1.900549112753545 0.4500282940843599 1.0 ['ENST00000336032.3_1_6:89794159-89794297:+|nuORF'] 127941 17621 VPGYQGVN True H1975_Epitope_Rep1 832.4079172786398 832.40682993586 73.32 2 -1.900633488448375 0.4500282940843599 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2', 'NOTCH2|p.E1495*|1|0.11|ENSG00000134250|chr1:119925333-119925334|-/A|frameshift_variant', 'ENST00000478864.1_1_1:120478044-120480072:-|nuORF'] 15821 13127 EDEELTRIFVM True NCI_RA007_Epitope_Rep2 1380.65951715668 1380.6584099358602 55.692 2 -1.900640552847561 0.4500282940843599 1.0 ['nc|ENSG00000155636|Q8IUH3-2|RBM45', 'ENST00000424000.6_1_2:178977216-178988379:+|nuORF', 'ENSG00000155636|ENST00000286070|RBM45', 'nc|ENSG00000155636|Q8IUH3|RBM45'] 55737 10378 LALPWPMPLE True PC9_epitope_Rep5 1165.6205528971698 1165.61944993586 44.903 2 -1.9009235609058266 0.4500729100920626 1.0 ['ENST00000560821.1_1_15:91352032-91358506:+|nuORF'] 80554 7056 PGPLSKQGS True PC9_epitope_Rep6 869.46068112749 869.45958993586 36.156 2 -1.9009924265232219 0.4500729100920626 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 130750 8853 VSYKHMRF True PC9_epitope_Rep4 1066.53822025554 1066.53712993586 41.584 2 -1.9012928223606274 0.4500968465037324 1.0 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3'] 54151 17421 KVPNFIGQYYK True NCI_RA007_Epitope_Rep2 1355.7237720957498 1355.7221249037902 72.503 3 -1.9013252925258723 0.4500968465037324 1.0 ['nc|ENSG00000177414|Q5VVX9-2|UBE2U', 'ENSG00000177414|ENST00000371077|UBE2U', 'nc|ENSG00000177414|Q5VVX9|UBE2U'] 136934 25108 YAGFHVAL True PC9_epitope_Rep3 876.4493881678 876.44828993586 101.93 2 -1.901362876052177 0.4500968465037324 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 53946 12755 KTTQFIMFETF True NCI_RA007_Epitope_Rep1 1391.6795243252698 1391.67842993586 53.6 2 -1.901480198607676 0.4500968465037324 1.0 ['ENST00000403258.1_1_6:88986231-88986483:-|nuORF'] 61487 23426 LKCLRRFHVF True PC9_epitope_Rep4 1317.7492160812901 1317.7481099358602 98.394 2 -1.9015086496020646 0.4500979325353645 1.0 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000484203.5_1_2:86348636-86354493:+|nuORF', 'ENST00000480102.1_1_2:86352635-86354493:+|nuORF'] 30574 4767 GAHVLPPL True NCI_RA007_Epitope_Rep4 802.47012361238 802.46902993586 24.769 2 -1.901526943337888 0.4500979325353645 1.0 ['ENST00000340957.9_1_3:184062770-184063025:+|nuORF'] 108161 7864 SYFSNAPV True PC9_epitope_Rep1 883.4075829254699 883.40648993586 35.075 2 -1.9016048650013793 0.45012078083175555 1.0 ['ENSG00000134815|ENST00000328771|DHX34'] 98804 20256 SGLSTWIG True H1975_Epitope_Rep3 819.41266830591 819.41156993586 84.713 2 -1.901611993817535 0.45012078083175555 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4', 'ENST00000471405.5_1_7:135366313-135386730:-|nuORF'] 62031 14056 LLDRLRKHQG True H1975_Epitope_Rep3 1234.72583778442 1234.72474993586 59.39 2 -1.9017136042518932 0.45013274721448465 1.0 ['ENSG00000061938|ENST00000672887|TNK2', 'nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'TNK2|p.D734*|1|0.32|ENSG00000061938|chr3:195868054-195868055|-/C|frameshift_variant', 'ENST00000481865.5_1_3:195596955-195610258:-|nuORF', 'nc|ENSG00000061938|Q07912-2|TNK2'] 98815 20239 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 83.872 2 -1.9017163091533555 0.45013274721448465 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 135753 24330 WLYNRLLHKF True PC9_epitope_Rep2 1388.7717253476796 1388.77006490379 99.126 3 -1.901936904769038 0.45013708764905563 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 139572 14844 YLVNRIKEL True PC9_epitope_Rep5 1146.67609362734 1146.6749899358601 62.099 2 -1.9020141173262914 0.45013708764905563 1.0 ['ENSG00000206530|ENST00000393845|CFAP44'] 110344 24929 TETRIKGHST True PC9_epitope_Rep3 1128.5887351749197 1128.5876299358601 101.25 2 -1.902051225076829 0.45013708764905563 1.0 ['ENST00000473406.5_1_1:76252445-76253285:+|nuORF'] 98661 6450 SGCACGCGCE True NCI_RA007_Epitope_Rep3 888.2234302612 888.22232993586 32.397 2 -1.9021140642494259 0.45013708764905563 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 89446 11102 QYEMHPDQ True NCI_RA007_Epitope_Rep5 1046.4127449589 1046.4116499358602 49.339 2 -1.9021789851342474 0.45013708764905563 1.0 ['TFAP2D|p.G155E|1|0.13|ENSG00000008197|chr6:50715540-50715540|G/A|missense_variant'] 111396 20565 THSGERPFNC True H1975_Epitope_Rep2 1146.4876412346598 1146.48598490379 85.193 3 -1.9022145414460725 0.45013708764905563 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 119334 11637 VAPAEPPP True H1975_Epitope_Rep1 776.4068546494799 776.40630496793 49.752 1 -1.9022308048633463 0.45013708764905563 1.0 ['ENST00000405486.5_2_22:41681548-41681698:-|nuORF', 'ENST00000422838.1_2_22:41681494-41681698:-|nuORF'] 82997 22589 PSGHTTGH True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 93.325 2 -1.902296077366931 0.45013708764905563 1.0 ['ENSG00000147206|ENST00000395065|NXF3', 'NXF3|p.E411Sfs*3|1|0.78|ENSG00000147206|chrX:103079463-103079463|C/-|frameshift_variant'] 106582 9608 STNREDEDTPP True PC9_epitope_Rep4 1259.5265884108298 1259.52493490379 44.581 3 -1.902442583181412 0.45014307007713816 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 67662 3622 LSWAGIECLWL True NCI_RA007_Epitope_Rep1 1289.64783027417 1289.64619490379 18.031 3 -1.9025782324236207 0.45018169158126076 1.0 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|53|1|anti-sense'] 91425 19146 RHKSVRRIFLF True NCI_RA007_Epitope_Rep3 1457.87317072445 1457.87152490379 83.613 3 -1.9026742417891676 0.45018277557770137 1.0 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 81043 25202 PIPHLVLT True H1975_Epitope_Rep2 888.54328855264 888.54218993586 103.54 2 -1.9026829954168556 0.45018277557770137 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 83434 18451 PTMIRAFPAN True PC9_epitope_Rep5 1116.5749996870798 1116.57390993586 75.994 2 -1.902865239006609 0.45021051600900813 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 7363 18201 ARRQQKLNKQQ True NCI_RA007_Epitope_Rep4 1396.801127983 1396.80002993586 78.762 2 -1.9029152882852571 0.4502110347228266 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 58303 17097 LELWVNYYVRW True PC9_epitope_Rep3 1539.7874349814701 1539.78632993586 70.914 2 -1.9030344761198823 0.4502110347228266 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 124359 5366 VGTVIGTG True NCI_RA007_Epitope_Rep5 702.39120458534 702.39065496793 27.33 1 -1.903061645877164 0.4502110347228266 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B', 'nc|ENSG00000130487|Q96G42|KLHDC7B'] 121144 19957 VERWQWIFFFH True H1975_Epitope_Rep3 1593.7881036878098 1593.7870099358602 83.524 2 -1.9030795883093465 0.4502110347228266 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF'] 140989 23092 YSHGITLV True PC9_epitope_Rep6 888.4705175352 888.46942993586 101.92 2 -1.9031281849865682 0.4502110347228266 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3', 'nc|ENSG00000120645|Q9UPP2-2|IQSEC3'] 104382 17115 SQKHTRIL True NCI_RA007_Epitope_Rep5 981.5719629119699 981.57086993586 72.606 2 -1.9033213151168435 0.4502110347228266 1.0 ['ENSG00000172167|ENST00000305949|MTBP'] 56502 6263 LDFGTWTSM True NCI_RA007_Epitope_Rep1 1056.45863252216 1056.45752993586 28.392 2 -1.9033228606398824 0.4502110347228266 1.0 ['nc|ENSG00000108061|Q9UQ13-2|SHOC2', 'ENSG00000108061|ENST00000369452|SHOC2'] 50106 22779 KKKDHLISGLL True PC9_epitope_Rep6 1250.7710566413398 1250.76994993586 100.71 2 -1.90347190018946 0.4502110347228266 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 122800 13785 VGGQLWHL True PC9_epitope_Rep3 908.4868363056801 908.48572993586 58.102 2 -1.903536688739864 0.4502110347228266 1.0 ['ENST00000429989.7_1_10:82280023-82280299:+|nuORF'] 14290 9716 DSTLLIWQ True H1975_Epitope_Rep1 974.5072969667399 974.50618993586 42.3 2 -1.9035880310813174 0.4502110347228266 1.0 ['nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L', 'nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L', 'ENSG00000074964|ENST00000361221|ARHGEF10L', 'ENST00000469726.5_1_1:17942561-18023872:+|nuORF', 'ENST00000495593.1_1_1:18021396-18023872:+|nuORF', 'nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L'] 91491 19714 RHSERVRAA True NCI_RA007_Epitope_Rep4 1080.5900725876 1080.5889699358602 85.195 2 -1.9035923586042653 0.4502110347228266 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1'] 30833 23210 GAPEPPAAAR True PC9_epitope_Rep5 935.4824792012298 935.4819349679301 94.258 1 -1.9036873359497801 0.4502121179158055 1.0 ['nc|ENSG00000099834|Q9HBB8-2|CDHR5', 'nc|ENSG00000099834|Q9HBB8-4|CDHR5', 'ENSG00000099834|ENST00000397542|CDHR5'] 138850 23515 YKARPFKK True NCI_RA007_Epitope_Rep3 1036.6181848283998 1036.6170899358601 102.03 2 -1.9037484581484772 0.4502121179158055 1.0 ['LRP1B|p.C3762F|1|0.2|ENSG00000168702|chr2:140358089-140358089|C/A|missense_variant'] 122612 7780 VGFQEAMK True PC9_epitope_Rep1 908.4425885351998 908.44148993586 34.749 2 -1.9038619411200741 0.4502142841603759 1.0 ['B4GALT5|p.D226Y|1|0.4|ENSG00000158470|chr20:49640596-49640596|C/A|missense_variant', 'ENSG00000158470|ENST00000371711|B4GALT5'] 38629 20886 HFGFILLM True H1975_Epitope_Rep3 976.52044493308 976.51934993586 87.222 2 -1.9039582346828596 0.4502142841603759 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 26769 7134 FKHLRWWWLSF True H1975_Epitope_Rep1 1604.8404736138398 1604.8388249037903 32.465 3 -1.9039732243926701 0.4502142841603759 1.0 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF'] 45020 12314 IPEWHPLNAGH True H1975_Epitope_Rep1 1269.6254550368099 1269.6243499358602 52.393 2 -1.9039926331942263 0.4502142841603759 1.0 ['USPL1|p.A392G|1|0.33|ENSG00000132952|chr13:30646994-30646994|C/G|missense_variant'] 53200 21610 KQEIKEIMSPT True NCI_RA007_Epitope_Rep5 1302.6853379816996 1302.68368490379 90.213 3 -1.904048361417662 0.4502202643171806 1.0 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1'] 83008 9498 PSGTFLVRRHR True PC9_epitope_Rep2 1324.7476358581598 1324.74652993586 41.876 2 -1.9042901169270283 0.4502322242405125 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 79772 14050 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 60.733 2 -1.9043331453369319 0.4502322242405125 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 22997 16013 EVFAKVLR True PC9_epitope_Rep2 960.5756513100799 960.57454993586 66.848 2 -1.9043629462064167 0.45023547197720326 1.0 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000590244.1_1_17:58543761-58603427:-|nuORF'] 124564 14891 VGVRLQRPL True NCI_RA007_Epitope_Rep5 1036.6505475858398 1036.64997496793 63.947 1 -1.9045109290729285 0.45023547197720326 1.0 ['ENST00000482665.1_1_16:334415-335240:+|nuORF'] 34193 22482 GNGVLQVS True PC9_epitope_Rep5 772.40791727864 772.40682993586 91.478 2 -1.9045239213035403 0.45023547197720326 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 97231 4065 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 22.489 2 -1.904546633300659 0.45023547197720326 1.0 ['ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 124446 6619 VGVGWEGL True NCI_RA007_Epitope_Rep5 815.4177536863499 815.41664993586 32.121 2 -1.904553041486769 0.45023547197720326 1.0 ['ENST00000370110.5_1_10:103541168-103541297:-|nuORF'] 108996 6972 TAGSFSLSVR True NCI_RA007_Epitope_Rep3 1023.53490869691 1023.5343749679301 34.532 1 -1.9046152194852202 0.45023547197720326 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 81733 21937 PLPCSHPA True H1975_Epitope_Rep2 820.39015903952 820.38906993586 90.702 2 -1.9049790100944028 0.4502398016334787 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 66120 12359 LSELGWLHN True H1975_Epitope_Rep3 1067.53999407735 1067.53947496793 52.726 1 -1.9051574459345557 0.4502398016334787 1.0 ['ENSG00000126216|ENST00000261965|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-3|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-2|TUBGCP3'] 48489 13116 KAGGGGGK True H1975_Epitope_Rep1 630.3449230992601 630.3443749679301 55.542 1 -1.9051825584825337 0.4502398016334787 1.0 ['ENSG00000105675|ENST00000262623|ATP4A', 'ATP4A|p.A875Gfs*7|1|0.04|ENSG00000105675|chr19:35553164-35553165|-/AGCATCC|frameshift_variant'] 70431 1239 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 6.4715 3 -1.905353358005723 0.4502398016334787 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 70453 26523 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 110.39 3 -1.9053589268008164 0.4502398016334787 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 37439 13717 GVTKRGETL True PC9_epitope_Rep2 959.5399940773499 959.53888993586 58.053 2 -1.9054682955411126 0.4502398016334787 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.D2888Pfs*19|1|0.26|ENSG00000131018|chr6:152381351-152381354|ATCT/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.W1342Lfs*5|1|0.44|ENSG00000131018|chr6:152441254-152441255|-/A|frameshift_variant'] 67621 4717 LSVPEAARTEA True NCI_RA007_Epitope_Rep2 1142.59315184902 1142.5920499358601 22.976 2 -1.9054777058901204 0.4502398016334787 1.0 ['ENSG00000173546|ENST00000308508|CSPG4'] 76271 27440 NPKQFMTM True PC9_epitope_Rep1 995.4568587003499 995.45576993586 112.23 2 -1.905483392907835 0.4502398016334787 1.0 ['nc|ENSG00000167889|Q3V5L5-5|MGAT5B', 'ENSG00000167889|ENST00000569840|MGAT5B', 'nc|ENSG00000167889|Q3V5L5-2|MGAT5B'] 100718 23129 SLDRVKVLVL True H1975_Epitope_Rep2 1140.7230438197598 1140.72194993586 95.426 2 -1.9055640795083075 0.45024578040716895 1.0 ['ENSG00000144840|ENST00000273375|RABL3', 'ENST00000491398.5_1_3:120457479-120461354:-|nuORF'] 39351 23468 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 97.574 3 -1.9056674993467986 0.45024686256171564 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 138872 7349 YKEDKKTW True NCI_RA007_Epitope_Rep1 1096.5553097883198 1096.5542099358602 32.579 2 -1.9057162008820465 0.45024686256171564 1.0 ['nc|ENSG00000100523|Q8NEL9-2|DDHD1', 'nc|ENSG00000100523|Q8NEL9-4|DDHD1', 'ENSG00000100523|ENST00000673822|DDHD1'] 95282 11582 RVPRDDWEEKR True H1975_Epitope_Rep1 1484.7484237038 1484.74732993586 49.537 2 -1.9060338456821422 0.4502528410635637 1.0 ['ENSG00000015479|ENST00000394805|MATR3'] 55215 6503 LADDHLIEV True NCI_RA007_Epitope_Rep1 1023.52367530687 1023.5225699358599 29.311 2 -1.9061800222504723 0.45025392302924194 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 32435 16235 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 69.196 2 -1.9062122389794256 0.45025392302924194 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 92266 22803 RLKTAAAAAA True PC9_epitope_Rep4 942.5610638750998 942.55996993586 95.933 2 -1.9062517115241855 0.4502680425823429 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 2795 16616 AEVATSPKV True PC9_epitope_Rep6 900.4916469025999 900.49054993586 76.377 2 -1.906274201163399 0.4502680425823429 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 34616 22622 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 93.456 2 -1.906274571402775 0.4502680425823429 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 70436 1599 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 8.3142 3 -1.9063413575402304 0.4502680425823429 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 71551 4850 MAQSKANGSH True PC9_epitope_Rep2 1029.46617751409 1029.46508993586 24.026 2 -1.9063599527594588 0.4502680425823429 1.0 ['ENSG00000171729|ENST00000376008|TMEM51'] 136930 23632 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 98.225 2 -1.9064786080236313 0.4502680425823429 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 58365 6908 LENIRDNLPP True H1975_Epitope_Rep3 1179.62478633047 1179.62368993586 31.532 2 -1.9067477108735287 0.4502740202688008 1.0 ['ENSG00000058085|ENST00000264144|LAMC2'] 15240 8114 EAELATARS True H1975_Epitope_Rep1 946.47197408718 946.47086993586 36.155 2 -1.906882831279119 0.4502859752517235 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 61917 14513 LLDERLVTL True H1975_Epitope_Rep2 1070.63356010902 1070.6324699358602 60.983 2 -1.9068969052535725 0.4502859752517235 1.0 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3', 'ENST00000511386.1_1_5:99285077-99285230:-|nuORF'] 130228 24429 VSFCVGYV True PC9_epitope_Rep4 872.4102257777598 872.40912993586 102.45 2 -1.9070790069778738 0.4503028260136788 1.0 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 70029 22094 LVMQQQHQ True PC9_epitope_Rep2 1010.4967493663801 1010.49564993586 90.457 2 -1.9071224810750174 0.45030498744169356 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'HDAC5|p.I932Lfs*14|1|0.09|ENSG00000108840|chr17:44080433-44080433|G/-|frameshift_variant', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 7794 2560 ASTASQRPLKG True PC9_epitope_Rep6 1114.6094706194997 1114.60836993586 14.777 2 -1.9074291205877407 0.45030498744169356 1.0 ['nc|ENSG00000234515|Q96PQ5|PPP1R2P1'] 80540 6218 PGPLSKQGS True NCI_RA007_Epitope_Rep4 869.46068112749 869.45958993586 30.525 2 -1.9075116517667898 0.45030498744169356 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 125804 24594 VKVPQLAL True PC9_epitope_Rep4 866.5589386167799 866.5583949679301 103.09 1 -1.9075301358891381 0.45030498744169356 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 94268 19805 RRRALSAFV True NCI_RA007_Epitope_Rep5 1074.6410455312998 1074.6399499358602 83.09 2 -1.907633819363794 0.4503060680851989 1.0 ['ENST00000262305.8_2_16:475669-476173:+|nuORF'] 46290 13037 ISPVESDSSVR True PC9_epitope_Rep1 1174.5829810881398 1174.58188993586 55.016 2 -1.9076559601162972 0.4503060680851989 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 38620 19280 HFFEILESECV True PC9_epitope_Rep3 1351.61183868827 1351.61020490379 79.382 3 -1.9079006671379704 0.45031910151450905 1.0 ['ENSG00000259571|ENST00000560104|BLID'] 15480 6242 EALQVAEHH True PC9_epitope_Rep4 1032.49885754136 1032.49776993586 31.055 2 -1.9079861205163575 0.45031910151450905 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'nc|ENSG00000187535|Q96RY7-2|IFT140', 'ENST00000565298.5_1_16:1574507-1576156:-|nuORF'] 30915 19341 GAQPDGEP True H1975_Epitope_Rep3 769.32424722433 769.32369496793 81.069 1 -1.9080175820089533 0.45031910151450905 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant', 'IRS4|p.A1032Cfs*2|1|0.54|ENSG00000133124|chrX:108733251-108733252|-/A|frameshift_variant', 'ENSG00000133124|ENST00000372129|IRS4', 'nc|ENSG00000133124|O14654|IRS4', 'IRS4|p.G575Dfs*36|1|0.72|ENSG00000133124|chrX:108734621-108734621|C/-|frameshift_variant'] 50099 19140 KKKARRRHTD True NCI_RA007_Epitope_Rep3 1294.7694339318998 1294.76832993586 83.591 2 -1.9080463425753424 0.45031910151450905 1.0 ['ENST00000489097.5_1_1:6535105-6537631:-|nuORF', 'nc|ENSG00000171680|O94827-4|PLEKHG5', 'ENSG00000171680|ENST00000377728|PLEKHG5', 'nc|ENSG00000171680|O94827-3|PLEKHG5', 'nc|ENSG00000171680|O94827-7|PLEKHG5'] 118821 7554 VAAKNQQI True PC9_epitope_Rep2 870.4923156089399 870.49120993586 34.422 2 -1.9083546877991362 0.4503359499010633 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 53496 25377 KRKFAGLLKN True PC9_epitope_Rep2 1173.7346115629696 1173.73297490379 103.29 3 -1.9087740566124092 0.45040715815566595 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 105964 23540 SSSSSFRN True PC9_epitope_Rep3 870.38315908278 870.38206993586 95.827 2 -1.908855907750828 0.45042400521852577 1.0 ['nc|ENSG00000174652|Q14584|ZNF266', 'ENSG00000174652|ENST00000592904|ZNF266'] 29745 11695 FVNDSLQQV True NCI_RA007_Epitope_Rep1 1048.5189242796 1048.5178299358602 49.465 2 -1.9088744622846785 0.4504299801045868 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1'] 59505 18318 LFRMLIRLL True PC9_epitope_Rep2 1173.74200544253 1173.7403549037901 75.789 3 -1.909102705185278 0.4504794416298841 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 101793 21166 SLPCSSEKIAP True PC9_epitope_Rep4 1130.56416021986 1130.56357496793 89.578 1 -1.9091411895881891 0.450493542635996 1.0 ['ITGAX|p.R997P|1|0.17|ENSG00000140678|chr16:31379995-31379995|G/C|missense_variant'] 119875 9836 VDFVLLGSS True PC9_epitope_Rep4 935.4963979298699 935.49530993586 45.483 2 -1.9091988718356803 0.450493542635996 1.0 ['ENST00000296674.12_1_5:81573566-81574204:-|nuORF'] 80644 6673 PGSPEAPQGK True NCI_RA007_Epitope_Rep4 966.4770594676198 966.47596993586 32.289 2 -1.9092167466758674 0.450493542635996 1.0 ['ENSG00000185163|ENST00000397333|DDX51'] 50102 24704 KKKDHLISGLL True PC9_epitope_Rep2 1250.7710566413398 1250.76994993586 100.7 2 -1.9092736572398337 0.450493542635996 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 128203 14319 VPMTPGTF True PC9_epitope_Rep2 848.4102257777599 848.4096749679301 60.342 1 -1.9093129710900532 0.450493542635996 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 38795 23647 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 97.453 2 -1.9093890552694877 0.450493542635996 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 56866 13822 LDPILYYFMA True PC9_epitope_Rep2 1244.61513316356 1244.6140299358601 58.449 2 -1.9094179655744965 0.45049951624650775 1.0 ['ENSG00000078589|ENST00000171757|P2RY10'] 140533 7167 YRNRNWEK True PC9_epitope_Rep2 1164.57883919756 1164.57774993586 32.959 2 -1.9095381510048155 0.4505185120768746 1.0 ['ENSG00000213471|ENST00000641754|TTLL13', 'nc|ENSG00000213471|A6NNM8|TTLL13'] 82211 8920 PPAEKPAAP True PC9_epitope_Rep3 876.4705175351999 876.46942993586 39.261 2 -1.9095998585519236 0.4505185120768746 1.0 ['ENSG00000129951|ENST00000520876|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-2|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-3|PLPPR3'] 135308 10315 WFWWYWQKEKI True H1975_Epitope_Rep1 1698.8347195270596 1698.83362993586 44.624 2 -1.909822816258123 0.4505185120768746 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 10548 23172 CLSLMTMRTLE True PC9_epitope_Rep6 1296.6240006784399 1296.6229099358602 102.23 2 -1.9098284418829423 0.4505185120768746 1.0 ['ENST00000305105.2_1_7:100865971-100866960:+|nuORF'] 71604 7980 MDKDGYFWFVA True NCI_RA007_Epitope_Rep3 1377.60635938501 1377.6052699358602 38.488 2 -1.9098391848091318 0.4505185120768746 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 26808 14035 FLAFLYAL True NCI_RA007_Epitope_Rep3 956.53714054304 956.53604993586 62.514 2 -1.9099109878583116 0.4505244850263601 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 70427 355 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 1.872 3 -1.9100544572982578 0.4505304578459933 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 81848 8808 PLQEDILMQN True NCI_RA007_Epitope_Rep4 1199.5856239404297 1199.58452993586 40.69 2 -1.9105349373596305 0.45054945054945056 1.0 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3'] 123508 11796 VGPHGQEG True NCI_RA007_Epitope_Rep2 779.3562160589499 779.35566496793 50.483 1 -1.9105861746323156 0.45054945054945056 1.0 ['ENST00000357436.4_1_22:38051691-38051868:+|nuORF'] 128205 12690 VPMTPGTF True PC9_epitope_Rep6 848.4102257777599 848.4096749679301 60.289 1 -1.9106653329162786 0.45054945054945056 1.0 ['ENSG00000109458|ENST00000262994|GAB1', 'nc|ENSG00000109458|Q13480-2|GAB1'] 47619 22473 IVYLYTKKV True H1975_Epitope_Rep1 1125.6797820254499 1125.6781349037901 93.484 3 -1.9106702915543936 0.45054945054945056 1.0 ['ENST00000503574.1_1_4:109543115-109543474:+|nuORF', 'ENSG00000109475|ENST00000394667|RPL34'] 142093 22803 YVNQIILF True PC9_epitope_Rep5 1008.5644179200399 1008.56332993586 92.702 2 -1.910922133895749 0.45054945054945056 1.0 ['ENSG00000126773|ENST00000406854|PCNX4'] 101889 10566 SLPRRNEMR True NCI_RA007_Epitope_Rep4 1157.60875942685 1157.60710490379 47.487 3 -1.911365460236364 0.45057656149808173 1.0 ['ENST00000398632.3_1_21:42775383-42780157:+|nuORF'] 56260 12155 LCTYVIHI True NCI_RA007_Epitope_Rep5 960.5102741722001 960.50916993586 53.408 2 -1.911430758050726 0.45057656149808173 1.0 ['GJA9|p.P439Qfs*23|1|0.53|ENSG00000131233|chr1:38874770-38874783|GAGGTTACCTTTAG/-|frameshift_variant', 'nc|ENSG00000131233|P57773-2|GJA9', 'ENSG00000131233|ENST00000357771|GJA9'] 12404 10426 DITLMKENFWD True H1975_Epitope_Rep1 1410.64895247298 1410.6478499358602 45.057 2 -1.9114559891130316 0.45057656149808173 1.0 ['ENSG00000117501|ENST00000367759|MROH9', 'nc|ENSG00000117501|Q5TGP6|MROH9'] 13425 16629 DMFNNPAT True NCI_RA007_Epitope_Rep5 908.36981751776 908.36872993586 70.729 2 -1.9114641793703355 0.45057656149808173 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 141554 14672 YTNGSTVPSP True PC9_epitope_Rep1 1021.47163973401 1021.47107496793 61.258 1 -1.9116115735553447 0.45057656149808173 1.0 ['nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.F1269Kfs*86|1|0.06|ENSG00000127329|chr12:70559598-70559599|-/CCAATTTT|frameshift_variant', 'ENST00000552253.1_1_12:70986014-71031175:-|nuORF', 'ENST00000538174.6_1_12:70979073-71031175:-|nuORF'] 30817 21216 GAPAPGPP True PC9_epitope_Rep3 662.33877508966 662.33822496793 86.896 1 -1.9116776342028552 0.45057656149808173 1.0 ['ENSG00000105245|ENST00000252891|NUMBL', 'ENST00000377411.4_1_1:9171491-9189192:-|nuORF'] 33183 3653 GIVYFYAA True PC9_epitope_Rep4 902.4538048418999 902.45270993586 20.173 2 -1.9117825902166046 0.45057656149808173 1.0 ['ENST00000401003.3_1_12:69126449-69133516:+|nuORF'] 112196 13647 TKGLVPKG True NCI_RA007_Epitope_Rep4 798.4963383602199 798.49524993586 59.714 2 -1.9117986583179922 0.45057656149808173 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9', 'ENST00000475908.5_1_5:56205193-56212726:+|nuORF'] 64138 20496 LPESIGAL True NCI_RA007_Epitope_Rep4 798.4487194614599 798.44762993586 88.753 2 -1.911881023184862 0.45057656149808173 1.0 ['ENSG00000137269|ENST00000370888|LRRC1'] 93838 24634 RRCRAACPSR True PC9_epitope_Rep2 1174.5923981700598 1174.5913099358602 100.4 2 -1.911915527078083 0.45057656149808173 1.0 ['ENST00000598494.5_2_19:6466686-6467070:+|nuORF'] 65814 14710 LSDKAKAC True NCI_RA007_Epitope_Rep2 834.4269384710599 834.4263849679301 61.889 1 -1.9119964018185283 0.45058085830100303 1.0 ['ENST00000588097.5_1_17:42381086-42381365:-|nuORF'] 78978 6451 PAIVVLLM True PC9_epitope_Rep4 854.52994698762 854.52884993586 31.91 2 -1.9119988114114599 0.45058085830100303 1.0 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 33297 16869 GKPGKRKE True NCI_RA007_Epitope_Rep4 898.5348491272599 898.53374993586 73.098 2 -1.9124302684061356 0.45058085830100303 1.0 ['nc|ENSG00000087494|P12272-2|PTHLH', 'ENSG00000087494|ENST00000545234|PTHLH', 'nc|ENSG00000087494|P12272-3|PTHLH'] 49779 15936 KHDVAHMIV True PC9_epitope_Rep4 1048.54878493924 1048.54768993586 69.224 2 -1.9124977786839525 0.45058085830100303 1.0 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 113506 16477 TLTETPLR True PC9_epitope_Rep1 929.5181960036099 929.5176449679301 68.205 1 -1.9125570917086734 0.45058085830100303 1.0 ['nc|ENSG00000167733|Q7Z5J1-4|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-3|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1|HSD11B1L'] 20110 9846 EMQRDHRA True H1975_Epitope_Rep2 1041.47741090413 1041.4763099358602 42.859 2 -1.9126264656715335 0.45058085830100303 1.0 ['ENST00000588075.5_3_17:76993904-76996331:-|nuORF', 'ENST00000588611.5_1_17:76993706-77001537:-|nuORF'] 43271 16094 IFRMKYKEGR True PC9_epitope_Rep3 1326.7230609030998 1326.7219699358602 67.055 2 -1.9127454556718844 0.45058085830100303 1.0 ['OR5K2|p.S230Y|1|0.09|ENSG00000231861|chr3:98498369-98498369|C/A|missense_variant'] 40142 3148 HQAELEVQTCP True NCI_RA007_Epitope_Rep2 1253.5710365054497 1253.56992993586 16.88 2 -1.912800440998488 0.45058085830100303 1.0 ['ENSG00000188549|ENST00000397536|CCDC9B', 'nc|ENSG00000188549|Q6ZUT6|CCDC9B', 'nc|ENSG00000188549|Q6ZUT6-2|CCDC9B', 'ENST00000382688.8_1_15:40627361-40631125:-|nuORF', 'nc|ENSG00000188549|Q6ZUT6-4|CCDC9B'] 20447 14638 EPGPPSPPAPK True PC9_epitope_Rep4 1072.5553097883198 1072.5542099358602 64.235 2 -1.9128748246999514 0.45058193238499905 1.0 ['nc|ENSG00000140481|Q8N5R6-4|CCDC33', 'nc|ENSG00000140481|Q8N5R6-5|CCDC33'] 117108 24107 TVKAAVPW True NCI_RA007_Epitope_Rep1 870.49633836022 870.49524993586 99.854 2 -1.9128928962610974 0.45058193238499905 1.0 ['EPB41L4B|p.G573V|1|0.27|ENSG00000095203|chr9:109213734-109213734|C/A|missense_variant'] 116118 18029 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 76.146 2 -1.9131096054870282 0.45063244371033645 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 48637 28010 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 118.47 3 -1.9131193421556505 0.45063244371033645 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 35424 23417 GSEKGIILKFL True NCI_RA007_Epitope_Rep5 1203.7227094665898 1203.72106490379 97.369 3 -1.9131609574393758 0.45063244371033645 1.0 ['ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A', 'ENST00000514316.1_1_5:115814236-115815903:-|nuORF'] 24934 21512 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 89.824 2 -1.9135257352283195 0.45065846662030595 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 109223 5498 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 25.978 2 -1.9136067856451886 0.45065846662030595 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 56298 14566 LDANLPNLIL True H1975_Epitope_Rep1 1094.63356010902 1094.6324699358602 61.233 2 -1.913635759724927 0.45065846662030595 1.0 ['ENST00000361758.8_1_6:163993048-163993090:+|nuORF'] 121691 20927 VFLCWFFK True PC9_epitope_Rep5 1088.55174506136 1088.55064993586 85.553 2 -1.9138519867610728 0.45065846662030595 1.0 ['ENST00000252818.4_1_19:18390620-18391193:-|nuORF'] 72185 12613 MGQKGGST True NCI_RA007_Epitope_Rep5 764.34868815036 764.34758993586 55.168 2 -1.9138990948329915 0.45065846662030595 1.0 ['SEMG2|p.K29T|1|0.26|ENSG00000124157|chr20:45221718-45221718|A/C|missense_variant'] 34259 21131 GNRLRAELGR True PC9_epitope_Rep6 1140.64758746372 1140.64648993586 94.125 2 -1.914005825216856 0.45065846662030595 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 3898 23900 AHCEASAR True H1975_Epitope_Rep3 843.36573519683 843.3651849679301 99.645 1 -1.9140113663839062 0.45065846662030595 1.0 ['ENST00000453424.6_1_10:45952026-45952551:-|nuORF'] 142779 23457 YYRLLITHL True PC9_epitope_Rep4 1190.68117900778 1190.68008993586 98.515 2 -1.9140420048460993 0.45065846662030595 1.0 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 40076 8784 HPVAAPAL True H1975_Epitope_Rep3 774.4388234841 774.43772993586 38.793 2 -1.914439480387006 0.4507078982538872 1.0 ['ENST00000564629.1_1_16:31469444-31469618:-|nuORF'] 83431 18536 PTMIRAFPAN True PC9_epitope_Rep1 1116.5749996870798 1116.57390993586 76.088 2 -1.9145470214393 0.45072473216420017 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 83643 8543 PVDVPSAR True PC9_epitope_Rep1 839.45011644379 839.44900993586 37.698 2 -1.914719171423038 0.45073284151283693 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-4|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-3|SLC30A5'] 91516 23717 RHYRRLALL True NCI_RA007_Epitope_Rep4 1196.7254438615998 1196.7243499358601 102.84 2 -1.9147367098740824 0.45073284151283693 1.0 ['ENSG00000187581|ENST00000342144|COX8C'] 21295 5670 EREFEELDTQR True H1975_Epitope_Rep3 1450.6688359704197 1450.66772993586 26.84 2 -1.9147543709737793 0.45073284151283693 1.0 ['nc|ENSG00000175354|P17706-3|PTPN2', 'nc|ENSG00000175354|P17706-2|PTPN2', 'nc|ENSG00000175354|P17706-4|PTPN2', 'ENSG00000175354|ENST00000309660|PTPN2'] 41347 23357 HWPKGLTP True NCI_RA007_Epitope_Rep4 934.5024863698198 934.50138993586 101.41 2 -1.9151208464119198 0.45073284151283693 1.0 ['ENST00000311604.7_1_11:1913145-1913319:+|nuORF'] 15561 12607 EAQDLITKDR True H1975_Epitope_Rep2 1187.61461556959 1187.61350993586 53.589 2 -1.9152186277475742 0.45073284151283693 1.0 ['ESYT1|p.A661T|1|0.2|ENSG00000139641|chr12:56137541-56137541|G/A|missense_variant'] 63585 6212 LMGAVSDLCE True H1975_Epitope_Rep3 1036.45691827 1036.45582993586 28.907 2 -1.915243960243494 0.4507381937880911 1.0 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF', 'USP4|p.K811Sfs*32|1|0.71|ENSG00000114316|chr3:49284095-49284095|T/-|frameshift_variant'] 74616 24711 NGHYTEPYASS True H1975_Epitope_Rep1 1224.50473076744 1224.50308490379 102.37 3 -1.9157402369540346 0.4507381937880911 1.0 ['PTPN21|p.D800Vfs*50|1|0.07|ENSG00000070778|chr14:88479022-88479032|CGTGGTGAGGT/-|frameshift_variant', 'ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 66714 9940 LSLFLGNNRI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65458993586 44.876 2 -1.9157409117810453 0.4507381937880911 1.0 ['ZC3H14|p.T59R|1|0.63|ENSG00000100722|chr14:88568135-88568135|C/G|missense_variant'] 16673 6302 EERCQELFD True PC9_epitope_Rep4 1167.48663817515 1167.48554993586 31.302 2 -1.915757261180768 0.4507381937880911 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ENSG00000125257|ENST00000645237|ABCC4'] 72711 25039 MMVIIHKK True NCI_RA007_Epitope_Rep5 998.5769142633801 998.57580993586 103.81 2 -1.9157923765003526 0.4507381937880911 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 50100 24893 KKKDHLISGLL True PC9_epitope_Rep1 1250.7710566413398 1250.76994993586 100.66 2 -1.9158103415555954 0.4507381937880911 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 123163 9594 VGKTKKRT True NCI_RA007_Epitope_Rep1 916.5817993196799 916.58070993586 41.315 2 -1.9158982805497817 0.4507381937880911 1.0 ['ENSG00000130477|ENST00000519716|UNC13A', 'UNC13A|p.P1139Rfs*2|1|0.15|ENSG00000130477|chr19:17632794-17632795|-/C|frameshift_variant'] 3113 23681 AGAHALYL True PC9_epitope_Rep4 814.4337381036601 814.43264993586 99.435 2 -1.9159175811312867 0.4507381937880911 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 122449 22549 VGEAALQVRT True PC9_epitope_Rep6 1042.5771078620598 1042.57657496793 99.748 1 -1.9159311126178198 0.4507381937880911 1.0 ['ENST00000518575.5_3_8:144373699-144373822:+|nuORF'] 3076 13002 AFWRQPAGP True NCI_RA007_Epitope_Rep4 1028.5191990631197 1028.5181099358601 57.113 2 -1.9159386814188488 0.4507381937880911 1.0 ['nc|ENSG00000129103|Q8NBJ7-3|SUMF2', 'nc|ENSG00000129103|Q8NBJ7-2|SUMF2', 'ENSG00000129103|ENST00000434526|SUMF2'] 41276 5129 HVPHEHYNQ True H1975_Epitope_Rep3 1159.51590458783 1159.51480993586 24.838 2 -1.9161386767499822 0.45076206098660554 1.0 ['nc|ENSG00000105879|Q75N03-2|CBLL1', 'ENSG00000105879|ENST00000440859|CBLL1'] 53846 13995 KTGSSGII True PC9_epitope_Rep2 761.42831837005 761.4277649679301 59.103 1 -1.9161698060910062 0.45076206098660554 1.0 ['nc|ENSG00000125207|Q96J94-3|PIWIL1', 'nc|ENSG00000125207|Q96J94-2|PIWIL1', 'ENSG00000125207|ENST00000245255|PIWIL1'] 22987 11855 EVEWHLLAH True PC9_epitope_Rep5 1132.5665431783598 1132.56490490379 50.598 3 -1.9161776320003663 0.45076206098660554 1.0 ['ENSG00000176715|ENST00000614302|ACSF3'] 27041 21454 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 89.586 2 -1.9161848073475922 0.45076206098660554 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 52799 24497 KNQRRVGLTHV True PC9_epitope_Rep4 1306.7582005418599 1306.7571099358602 102.71 2 -1.9162111977727885 0.4507680274621418 1.0 ['ENST00000261396.5_1_1:229577072-229577156:-|nuORF'] 48615 28424 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 118.91 3 -1.916259544189136 0.45077399380804956 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 110491 6365 TFGGLGSL True PC9_epitope_Rep4 750.39120458534 750.39010993586 31.564 2 -1.9163890053612544 0.4508125488832884 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 50103 24783 KKKDHLISGLL True PC9_epitope_Rep3 1250.7710566413398 1250.76994993586 100.71 2 -1.9164761197274565 0.4508402402859098 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 101813 16518 SLPELRSL True NCI_RA007_Epitope_Rep1 913.5232813840499 913.52218993586 68.366 2 -1.916686776321388 0.45086793108692347 1.0 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'ENST00000486084.1_1_1:161008305-161008679:-|nuORF'] 78906 9550 PAGKGGGG True H1975_Epitope_Rep1 599.30272393411 599.30217496793 41.659 1 -1.9170850167916744 0.4508798609602433 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'STRN4|p.V351Sfs*20|1|0.27|ENSG00000090372|chr19:46727996-46727996|C/-|frameshift_variant'] 139710 13478 YNLYIVENPHY True PC9_epitope_Rep5 1423.6772158261501 1423.67610993586 56.86 2 -1.9171283468961506 0.4508798609602433 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 70454 26601 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 110.74 3 -1.917292399555985 0.45089179031522236 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 81126 12134 PKGEESVAAR True NCI_RA007_Epitope_Rep1 1042.54072235334 1042.5396299358601 51.18 2 -1.9172960402062047 0.45089179031522236 1.0 ['ENST00000559109.2_1_15:31745531-31745762:-|nuORF'] 84935 5210 QEEDMWAGLWQ True NCI_RA007_Epitope_Rep1 1391.58160118915 1391.5805099358602 24.348 2 -1.9173664042834613 0.4509037191518943 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 36614 12062 GVIAFGSA True NCI_RA007_Epitope_Rep4 720.3806399016399 720.3800949679301 53.396 1 -1.9174270320630038 0.4509037191518943 1.0 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1'] 61922 8480 LLDFESPEHME True NCI_RA007_Epitope_Rep2 1345.58601786325 1345.5849299358601 37.629 2 -1.9174712945290981 0.4509047856972172 1.0 ['MCF2L2|p.D777H|1|0.16|ENSG00000053524|chr3:183219897-183219897|C/G|missense_variant'] 12439 8068 DIVVGEGTHF True H1975_Epitope_Rep3 1072.5189242795998 1072.5178299358602 36.007 2 -1.9174785287320553 0.4509047856972172 1.0 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1', 'ENST00000532859.1_1_11:43755320-43755701:+|nuORF'] 22791 9643 ETYWYLWRFT True NCI_RA007_Epitope_Rep1 1463.6873865870298 1463.68628993586 41.509 2 -1.9175601840871388 0.45091074978005147 1.0 ['ENSG00000198162|ENST00000356554|MAN1A2'] 86542 15356 QLDGKKKKP True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 64.223 2 -1.9176137978521715 0.4509118161378966 1.0 ['APC|p.G2227Qfs*12|1|0.14|ENSG00000134982|chr5:112842270-112842271|CG/-|frameshift_variant', 'nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC'] 70456 26420 LVTVLQRRRP True H1975_Epitope_Rep2 1236.7778733572798 1236.77623490379 108.75 3 -1.9176704967823544 0.4509118161378966 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 126452 10661 VLLAAEPLDV True H1975_Epitope_Rep3 1038.5961119711399 1038.5950099358602 46.082 2 -1.9177699910138986 0.4509286412512219 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 61130 26346 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 107.59 3 -1.9179683321081664 0.45094056825093404 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 59360 24709 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 106.85 2 -1.9179793616779521 0.45094056825093404 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'HDAC7|p.S364Qfs*33|1|0.1|ENSG00000061273|chr12:47795261-47795262|-/G|frameshift_variant'] 64659 10779 LPVDGRPLP True NCI_RA007_Epitope_Rep4 962.5549158654999 962.55380993586 48.309 2 -1.9183796731993608 0.45099593804982946 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 30549 7459 GAGTGQRL True PC9_epitope_Rep3 758.4035006045399 758.40240993586 33.694 2 -1.9183909656296456 0.45099593804982946 1.0 ['ENST00000335290.10_1_14:100842832-100847262:+|nuORF'] 94262 18731 RRQWTSRKR True NCI_RA007_Epitope_Rep3 1272.72756911992 1272.7264699358602 81.91 2 -1.9184826533294737 0.4510127613358675 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 109224 5592 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 26.337 2 -1.918582001318062 0.4510355463362186 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 63073 3582 LLQKPLRWHDA True PC9_epitope_Rep5 1375.7724536236701 1375.7707949037901 18.853 3 -1.9185873431211435 0.4510355463362186 1.0 ['ENSG00000011028|ENST00000303375|MRC2'] 26073 8742 FGLFDYLRNPY True H1975_Epitope_Rep3 1403.6873865870298 1403.68628993586 38.631 2 -1.9187421489912977 0.45105833034676746 1.0 ['CACNA1I|p.S1827Lfs*26|1|0.16|ENSG00000100346|chr22:39679800-39679801|-/C|frameshift_variant', 'nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 22755 8474 ETVGAVVYAEV True H1975_Epitope_Rep1 1135.57610480255 1135.5750099358602 37.525 2 -1.9187827122947252 0.45105833034676746 1.0 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 12932 16065 DLKQFFETN True H1975_Epitope_Rep2 1140.54513902744 1140.54349490379 66.996 3 -1.9188046583214595 0.45105939336019374 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 3317 13362 AGGGKKGG True H1975_Epitope_Rep2 630.3449230992599 630.3443749679301 56.529 1 -1.9188209113252208 0.45105939336019374 1.0 ['ENSG00000109061|ENST00000226207|MYH1', 'MYH1|p.T1278Qfs*18|1|0.3|ENSG00000109061|chr17:10500660-10500660|G/-|frameshift_variant', 'MYH1|p.E1318Nfs*2|1|0.26|ENSG00000109061|chr17:10499006-10499006|C/-|frameshift_variant', 'MYH1|p.E865Kfs*20|1|0.33|ENSG00000109061|chr17:10504909-10504909|T/-|frameshift_variant', 'GAS7-MYH1|1|fusion'] 61128 26203 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 106.84 3 -1.9189645117978418 0.45108707456397557 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 66132 5619 LSELPQEIGN True NCI_RA007_Epitope_Rep5 1098.55570371114 1098.55460993586 28.302 2 -1.919013731206661 0.4510881369184658 1.0 ['ENSG00000137269|ENST00000370888|LRRC1', 'ENST00000487251.5_1_6:53762124-53769284:+|nuORF'] 32431 14878 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 63.899 2 -1.9190293143174764 0.4510881369184658 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 124396 9862 VGVAYKLD True NCI_RA007_Epitope_Rep3 863.4752685624699 863.47416993586 45.866 2 -1.9190691628394216 0.4510940978443829 1.0 ['ENSG00000035687|ENST00000366535|ADSS2'] 91884 23577 RKKRRRSQRR True H1975_Epitope_Rep2 1425.8977627628499 1425.89611490379 97.178 3 -1.9191482000749422 0.45109516001172806 1.0 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A'] 93248 21981 RPRPRRYVE True NCI_RA007_Epitope_Rep4 1227.6948720093098 1227.69322490379 95.317 3 -1.919194254198632 0.45109516001172806 1.0 ['nc|ENSG00000189064|Q9UEU5|GAGE2D', 'nc|ENSG00000189064|Q13066|GAGE2B', 'ENSG00000215274|ENST00000407599|GAGE10', 'ENSG00000189064|ENST00000362097|GAGE2A'] 61127 26132 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 106.5 3 -1.9194161132571612 0.4511011206671879 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 116117 17939 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 75.79 2 -1.9194837301612118 0.45110708119319354 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 70434 1448 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 7.5294 3 -1.9196256310138176 0.45111304158974913 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 53880 24533 KTKRKSVLAT True PC9_epitope_Rep4 1130.7135417652198 1130.7124499358601 102.85 2 -1.9198117104081505 0.45112602341086283 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 82269 14849 PPGGGLRF True PC9_epitope_Rep4 799.43407245683 799.43296993586 65.056 2 -1.919861503435869 0.45112602341086283 1.0 ['nc|ENSG00000185513|Q9Y468|L3MBTL1', 'ENSG00000185513|ENST00000418998|L3MBTL1'] 8670 13851 AVAGENARVI True PC9_epitope_Rep2 998.5508931142199 998.54978993586 58.563 2 -1.9199126505644362 0.45112602341086283 1.0 ['ENSG00000184672|ENST00000521268|RALYL', 'nc|ENSG00000184672|Q86SE5-3|RALYL'] 81734 21451 PLPCSHPA True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 89.574 2 -1.9199413872461386 0.45112602341086283 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 125822 5628 VLAAPVPP True NCI_RA007_Epitope_Rep5 762.46397560278 762.46286993586 28.336 2 -1.9200344982327344 0.451127084781098 1.0 ['ENST00000531243.2_1_1:40041622-40042411:-|nuORF'] 119980 10312 VDPSFLAA True PC9_epitope_Rep1 818.4174193331799 818.41632993586 44.549 2 -1.920035312907272 0.451127084781098 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'HUWE1|p.P2977H|1|0.17|ENSG00000086758|chrX:53551432-53551432|G/T|missense_variant'] 18731 7986 ELARYNPSPL True NCI_RA007_Epitope_Rep1 1158.6033226099 1158.6022299358601 35.057 2 -1.920306087415587 0.4511607201024995 1.0 ['ENSG00000205209|ENST00000601241|SCGB2B2'] 10540 14900 CLPALASS True NCI_RA007_Epitope_Rep5 760.3789256494802 760.37782993586 63.981 2 -1.920376473361892 0.4511607201024995 1.0 ['ENST00000589445.1_1_19:901889-913148:-|nuORF', 'ENST00000590454.2_1_19:900936-902165:-|nuORF', 'ENSG00000198858|ENST00000361574|R3HDM4'] 10356 12464 CGECGLGF True PC9_epitope_Rep6 784.2883963929199 784.28728993586 59.369 2 -1.9203956732643677 0.45116667933419474 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-2|MZF1', 'ENST00000600004.1_1_19:59073441-59074896:-|nuORF'] 44775 18681 IMEREEKFVTD True H1975_Epitope_Rep3 1395.6704161935497 1395.6693099358602 78.339 2 -1.9205045072762588 0.4511677397639548 1.0 ['ENSG00000135338|ENST00000369846|LCA5'] 93697 8760 RQVCKNQSL True PC9_epitope_Rep2 1074.5604122521 1074.55930993586 39.051 2 -1.9205584209289375 0.4511677397639548 1.0 ['ENST00000488921.5_1_9:94877276-94877652:-|nuORF'] 10220 3959 CCCCCCCS True PC9_epitope_Rep5 826.10688658094 826.10578993586 20.305 2 -1.9208901804712804 0.4511845562528501 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 65638 22024 LSAGVPRR True PC9_epitope_Rep1 854.50863437942 854.50808496793 89.53 1 -1.9211196009043892 0.45120137237657837 1.0 ['ENST00000298307.9_1_14:50234918-50235191:+|nuORF'] 76249 9686 NPIFWEEVS True H1975_Epitope_Rep1 1119.5236753068698 1119.52256993586 42.182 2 -1.9212911537910962 0.4512073308433944 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 19020 14849 ELEVLSVLPP True H1975_Epitope_Rep1 1094.6223267189798 1094.6212299358601 62.348 2 -1.9215262643834494 0.45121924738887803 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant', 'nc|ENSG00000198198|Q5T011-7|SZT2'] 67332 14767 LSSELGDLEK True PC9_epitope_Rep3 1089.5553693579698 1089.55426993586 61.936 2 -1.9215640462216288 0.45121924738887803 1.0 ['nc|ENSG00000167034|Q99801-3|NKX3-1', 'nc|ENSG00000167034|Q99801-4|NKX3-1', 'nc|ENSG00000167034|Q99801-2|NKX3-1', 'nc|ENSG00000167034|Q99801-5|NKX3-1', 'ENSG00000167034|ENST00000380871|NKX3-1'] 38923 17225 HHGLKLQG True NCI_RA007_Epitope_Rep4 888.49298431528 888.49188993586 74.57 2 -1.9218670597099456 0.45122626453441034 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 48639 24234 KAQILKRRLVP True NCI_RA007_Epitope_Rep4 1320.87177374212 1320.8701349037901 105.1 3 -1.9219259804032773 0.45122626453441034 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 11332 13790 DELQLSDLL True NCI_RA007_Epitope_Rep3 1044.5339056374 1044.53280993586 61.572 2 -1.922013593448456 0.45122626453441034 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1', 'PKD2L1|p.Q574E|1|0.54|ENSG00000107593|chr10:100293319-100293319|G/C|missense_variant'] 104675 10325 SQTQKAKFS True PC9_epitope_Rep3 1023.5349086969098 1023.5343749679301 44.66 1 -1.9221194830681252 0.451234340056886 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 29933 22117 FVYKVPISLY True NCI_RA007_Epitope_Rep4 1227.69034670915 1227.68869490379 95.92 3 -1.9221728737319923 0.451234340056886 1.0 ['ENST00000316793.7_1_3:8794494-8794584:-|nuORF'] 68605 8175 LTHPSGEVW True H1975_Epitope_Rep1 1024.4977949121999 1024.49668993586 36.385 2 -1.9221818281097625 0.451234340056886 1.0 ['ENST00000460627.5_1_3:184100167-184100350:+|nuORF', 'nc|ENSG00000090539|Q9H2X0-4|CHRD', 'ENST00000470150.5_1_3:184098136-184100834:+|nuORF', 'nc|ENSG00000090539|Q9H2X0-5|CHRD', 'ENSG00000090539|ENST00000204604|CHRD'] 61438 20476 LIWDIWVL True PC9_epitope_Rep5 1056.60080342876 1056.5997099358601 83.8 2 -1.922359156384039 0.451234340056886 1.0 ['CES5A|p.A15D|1|0.46|ENSG00000159398|chr16:55875178-55875178|G/T|missense_variant'] 100116 15410 SISPALAC True NCI_RA007_Epitope_Rep2 760.37892564948 760.37782993586 64.643 2 -1.9224468273479842 0.451234340056886 1.0 ['ENST00000524753.4_1_11:18369576-18369654:+|nuORF'] 70457 26049 LVTVLQRRRP True H1975_Epitope_Rep3 1236.7778733572798 1236.77623490379 108.53 3 -1.922681862407689 0.45124943010355834 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 55469 11070 LAGARGPA True H1975_Epitope_Rep1 711.4027723285499 711.40222496793 47.544 1 -1.9227481557908424 0.45124943010355834 1.0 ['ENST00000579650.5_1_17:27038161-27038248:-|nuORF'] 3333 9131 AGGKVLRE True PC9_epitope_Rep1 828.4817509252399 828.48064993586 39.974 2 -1.922755072099818 0.45124943010355834 1.0 ['nc|ENSG00000029153|Q8WYA1-4|BMAL2', 'nc|ENSG00000029153|Q8WYA1-5|BMAL2', 'nc|ENSG00000029153|Q8WYA1-2|BMAL2', 'ENSG00000029153|ENST00000266503|BMAL2'] 139577 15036 YLVRVDEKHRR True NCI_RA007_Epitope_Rep2 1469.82152907441 1469.8204299358601 63.172 2 -1.9227977913202126 0.45124943010355834 1.0 ['ENSG00000112972|ENST00000325110|HMGCS1'] 38555 25099 HETGHVLG True PC9_epitope_Rep2 848.41406528824 848.41296993586 102.21 2 -1.92286843804426 0.45124943010355834 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 126928 19027 VLRATSDK True PC9_epitope_Rep2 888.5028802926399 888.50178993586 78.552 2 -1.9228931722761855 0.45124943010355834 1.0 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1', 'HOOK1|p.D307H|1|0.15|ENSG00000134709|chr1:59847175-59847175|G/C|missense_variant'] 70449 3275 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 16.631 3 -1.9230158191525046 0.45124943010355834 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 49120 8342 KEITEGDEVEV True PC9_epitope_Rep1 1246.5928770655 1246.59178993586 36.921 2 -1.9230374921228284 0.45124943010355834 1.0 ['ENSG00000129245|ENST00000250113|FXR2'] 7848 24558 ASYFTSCG True PC9_epitope_Rep1 834.3218046961799 834.32070993586 99.323 2 -1.9233137229087045 0.4512753717572995 1.0 ['ENST00000464265.5_1_21:38441882-38444742:-|nuORF'] 83433 18526 PTMIRAFPAN True PC9_epitope_Rep3 1116.5749996870798 1116.57390993586 76.477 2 -1.9234081038747695 0.4512753717572995 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 98644 24584 SGAGHGLG True H1975_Epitope_Rep2 654.30853759054 654.3079849679301 101.12 1 -1.923433769917521 0.4512753717572995 1.0 ['chr1:221918712-221976287|258|18.01|0.18|6.65|-|0|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|3'] 124330 15530 VGTRGPKVQ True NCI_RA007_Epitope_Rep3 940.5454138109599 940.54430993586 68.647 2 -1.9234721472362637 0.4512753717572995 1.0 ['ENST00000497892.5_1_5:60199409-60224782:-|nuORF', 'nc|ENSG00000049167|Q13216-2|ERCC8', 'ENSG00000049167|ENST00000676185|ERCC8'] 32430 14266 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 61.568 2 -1.9235556165224572 0.4512753717572995 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 83200 9897 PSTQRAVISP True NCI_RA007_Epitope_Rep5 1054.5771078620598 1054.5760099358602 44.712 2 -1.9236192904778073 0.4512753717572995 1.0 ['nc|ENSG00000147081|Q5JQC9-2|AKAP4', 'ENSG00000147081|ENST00000358526|AKAP4'] 123664 23736 VGQQAQIPIAT True PC9_epitope_Rep3 1124.6189726740397 1124.6183749679299 96.586 1 -1.9237182070717553 0.4512753717572995 1.0 ['nc|ENSG00000134532|P35711-4|SOX5', 'nc|ENSG00000134532|P35711-2|SOX5', 'nc|ENSG00000134532|P35711-5|SOX5', 'ENSG00000134532|ENST00000451604|SOX5', 'nc|ENSG00000134532|P35711-3|SOX5'] 82133 12169 PNGQIQGYR True NCI_RA007_Epitope_Rep2 1031.5148419586699 1031.51374993586 51.93 2 -1.9237743213927094 0.4512753717572995 1.0 ['PTPRD|p.Q1894Sfs*8|1|0.06|ENSG00000153707|chr9:8317934-8317934|A/-|frameshift_variant', 'ENSG00000153707|ENST00000381196|PTPRD', 'PTPRD|p.W1729Cfs*11|1|0.28|ENSG00000153707|chr9:8340409-8340409|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'PTPRD|p.W1440*|1|0.05|ENSG00000153707|chr9:8389298-8389298|C/-|frameshift_variant', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD'] 121593 21322 VFFFKVPKLG True PC9_epitope_Rep6 1180.7008518231999 1180.69921490379 94.876 3 -1.9238649053613501 0.45127642947075935 1.0 ['nc|ENSG00000133059|Q6XUX3-3|DSTYK', 'nc|ENSG00000133059|Q6XUX3-2|DSTYK', 'ENSG00000133059|ENST00000367162|DSTYK'] 62574 12216 LLKMILIK True PC9_epitope_Rep3 970.6612955103399 970.66018993586 52.02 2 -1.9239355280188106 0.45127642947075935 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A', 'ENST00000466472.1_1_21:44185493-44188444:+|nuORF'] 81058 12261 PIQGKKADSV True PC9_epitope_Rep2 1041.58185888933 1041.5807699358602 52.473 2 -1.924428544988207 0.45132090216423904 1.0 ['ENSG00000125844|ENST00000377813|RRBP1'] 45166 16606 IPPMLIIF True NCI_RA007_Epitope_Rep3 942.5612471159 942.5606949679301 73.102 1 -1.924478693326553 0.45132090216423904 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 70426 99 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 0.5161 3 -1.924834302476684 0.4513555753326532 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 19497 9414 ELPFDRVV True PC9_epitope_Rep3 973.5232813840499 973.52218993586 41.147 2 -1.9248667552607577 0.4513555753326532 1.0 ['nc|ENSG00000073150|Q96RD6-1|PANX2', 'ENSG00000073150|ENST00000395842|PANX2'] 65455 2385 LRKAALKQPF True PC9_epitope_Rep3 1170.7237125260997 1170.7220549037902 13.163 3 -1.9249204562720132 0.4513555753326532 1.0 ['ENST00000222120.7_1_19:11435272-11435518:-|nuORF'] 89908 14748 RCLYWASPSIP True PC9_epitope_Rep5 1291.6383282196298 1291.6372299358602 61.727 2 -1.9249270398587193 0.4513555753326532 1.0 ['ENST00000597219.1_3_19:58095687-58095951:+|nuORF'] 45286 12060 IPVYLEIV True H1975_Epitope_Rep3 944.5582699104399 944.55716993586 51.55 2 -1.925321749129532 0.4513744939930326 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 27250 6650 FLPPAPAA True NCI_RA007_Epitope_Rep5 782.4326754744999 782.43156993586 32.249 2 -1.9254465933620162 0.4513744939930326 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 82032 24322 PLVVKSVHC True H1975_Epitope_Rep2 980.54772231008 980.54662993586 100.08 2 -1.9256031964645324 0.4513744939930326 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 124420 9153 VGVFLRQL True NCI_RA007_Epitope_Rep4 930.5650866263798 930.56398993586 42.047 2 -1.9257503537095892 0.4513744939930326 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 70438 1744 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 9.0572 3 -1.925837614572966 0.4513744939930326 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 27320 18843 FLRVRANR True NCI_RA007_Epitope_Rep4 1030.6148307834599 1030.6137299358602 81.503 2 -1.9264455845263253 0.4514270211611503 1.0 ['ENST00000475378.5_1_1:45097966-45116444:+|nuORF', 'nc|ENSG00000187147|Q5VTB9-3|RNF220', 'ENSG00000187147|ENST00000361799|RNF220'] 13998 25469 DRDVLIVLVR True PC9_epitope_Rep2 1196.7241064489199 1196.72300993586 103.65 2 -1.9264625333014134 0.4514270211611503 1.0 ['nc|ENSG00000166501|P05771|PRKCB', 'PRKCB|p.G478Dfs*19|1|0.12|ENSG00000166501|chr16:24180826-24180826|G/-|frameshift_variant', 'PRKCB|p.K520Sfs*39|1|0.08|ENSG00000166501|chr16:24185132-24185132|G/-|frameshift_variant', 'ENSG00000166501|ENST00000643927|PRKCB', 'PRKCB|p.K315Rfs*23|1|0.29|ENSG00000166501|chr16:24123857-24123857|C/-|frameshift_variant'] 48616 28494 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 119.29 3 -1.926495374005463 0.4514270211611503 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 87328 24906 QPRQVIQKI True NCI_RA007_Epitope_Rep5 1108.67167695324 1108.67117496793 103.3 1 -1.9265702294787599 0.4514270211611503 1.0 ['CDH7|p.G497R|1|0.24|ENSG00000081138|chr18:65859041-65859041|G/A|missense_variant'] 70444 2235 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 11.558 3 -1.9265959418199332 0.4514270211611503 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 59607 4278 LFWHRREMWR True NCI_RA007_Epitope_Rep5 1515.7669914037497 1515.76534490379 23.035 3 -1.9266452793317694 0.4514270211611503 1.0 ['ENST00000405315.8_2_19:49403351-49403540:+|nuORF'] 132552 25018 VVDTVLAL True PC9_epitope_Rep5 828.4956696538799 828.49456993586 101.38 2 -1.9266831904976969 0.4514270211611503 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 53606 23392 KRRSCPGRTA True NCI_RA007_Epitope_Rep1 1130.6090937800197 1130.6079899358601 96.329 2 -1.9268868800419277 0.4514546776486419 1.0 ['ENST00000502420.1_1_5:177027188-177031371:+|nuORF', 'ENST00000029410.9_1_5:177027188-177031484:+|nuORF'] 80188 16831 PFVIMIAC True NCI_RA007_Epitope_Rep1 892.4550677951999 892.45396993586 69.598 2 -1.9269986523627787 0.4514616837033661 1.0 ['C3AR1|p.S349F|1|0.18|ENSG00000171860|chr12:8059140-8059140|G/A|missense_variant'] 15776 8894 EDAERREREER True H1975_Epitope_Rep3 1473.6920310264902 1473.6909299358601 39.208 2 -1.9271248825940264 0.4514616837033661 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 119112 18576 VAGVMAYL True NCI_RA007_Epitope_Rep1 822.4309612223399 822.43041496793 76.395 1 -1.9271316941683763 0.4514616837033661 1.0 ['nc|ENSG00000174837|Q14246-4|ADGRE1', 'nc|ENSG00000174837|Q14246-5|ADGRE1', 'nc|ENSG00000174837|Q14246-2|ADGRE1', 'nc|ENSG00000174837|Q14246-3|ADGRE1', 'ENSG00000174837|ENST00000312053|ADGRE1'] 108740 9137 SYRSSVSF True PC9_epitope_Rep4 931.43994568291 931.43884993586 42.736 2 -1.9273567806436052 0.45149144413459347 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 81181 16537 PKGKRGEK True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 72.841 2 -1.927412243744981 0.45149144413459347 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF'] 72596 24790 MLSFPTPSW True PC9_epitope_Rep2 1064.50010341132 1064.4990099358602 101.04 2 -1.9275931169784597 0.45149144413459347 1.0 ['ENST00000274963.12_1_6:36988332-36988498:+|nuORF'] 2454 19916 AEQLAGFLSI True PC9_epitope_Rep3 1047.5600608155898 1047.5589699358602 81.848 2 -1.927620040720212 0.45149144413459347 1.0 ['ENST00000328928.11_1_1:28212582-28212774:+|nuORF'] 30035 19085 FYFWEAALL True NCI_RA007_Epitope_Rep3 1158.5749826037397 1158.57334490379 83.366 3 -1.9276488010991442 0.45149144413459347 1.0 ['nc|ENSG00000145451|O75311-2|GLRA3', 'ENSG00000145451|ENST00000274093|GLRA3'] 142775 5244 YYRGQWGT True PC9_epitope_Rep1 1029.4668291370897 1029.46572993586 25.018 2 -1.9279046487194604 0.45149950088971835 1.0 ['ENSG00000164099|ENST00000296498|PRSS12', 'PRSS12|p.K816Tfs*18|1|0.1|ENSG00000164099|chr4:118282117-118282118|-/TGTG|frameshift_variant', 'ENST00000503043.1_1_4:119234230-119239656:-|nuORF'] 127498 24704 VNLPPALK True PC9_epitope_Rep4 850.5276384885 850.52708496793 103.52 1 -1.9280603311644735 0.45149950088971835 1.0 ['ENSG00000168564|ENST00000504169|CDKN2AIP'] 70682 23603 LWKMSILKV True NCI_RA007_Epitope_Rep3 1116.6729228232 1116.6718299358602 102.38 2 -1.9281681323008804 0.45149950088971835 1.0 ['ENST00000550125.5_1_12:49399131-49412528:-|nuORF'] 17097 9678 EGLLSVAL True H1975_Epitope_Rep3 800.4643695256 800.46326993586 42.245 2 -1.9282185266573642 0.45149950088971835 1.0 ['ENSG00000127903|ENST00000537055|ZNF835', 'ZNF835|p.C224Rfs*23|1|0.29|ENSG00000127903|chr19:56664528-56664529|CA/-|frameshift_variant', 'ZNF835|p.E92Gfs*5|1|0.19|ENSG00000127903|chr19:56664926-56664927|-/T|frameshift_variant'] 107264 13952 SVLAKFSL True PC9_epitope_Rep5 863.5116540711899 863.51054993586 58.688 2 -1.9282318205789328 0.45149950088971835 1.0 ['ENSG00000103148|ENST00000611875|NPRL3'] 139658 8540 YMRYLMEQD True H1975_Epitope_Rep1 1247.5314801925897 1247.53038993586 37.776 2 -1.9283433289027274 0.45150545217815874 1.0 ['ENST00000480199.1_1_8:28157565-28157883:+|nuORF'] 102143 18917 SLRQQLRER True NCI_RA007_Epitope_Rep5 1184.6738022115599 1184.6727099358602 79.603 2 -1.9285583972830507 0.45152820423795936 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 52364 24961 KKKQRPQKI True NCI_RA007_Epitope_Rep5 1152.74551059984 1152.7438649037902 103.51 3 -1.9286337858272864 0.45152820423795936 1.0 ['ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.V2035Cfs*47|1|0.14|ENSG00000171914|chr15:62797269-62797269|T/-|frameshift_variant', 'TLN2|p.E1407Nfs*32|1|0.15|ENSG00000171914|chr15:62752313-62752313|T/-|frameshift_variant'] 111968 10450 TIQSFDAINR True H1975_Epitope_Rep1 1163.5934862021898 1163.5923899358602 45.15 2 -1.928848444975739 0.45154500477389115 1.0 ['PEG3|p.H815R|1|0.94|ENSG00000198300|chr19:56815998-56815998|T/C|missense_variant'] 59215 4319 LFEFYPEFLL True PC9_epitope_Rep5 1316.6692769113997 1316.66764490379 21.683 3 -1.9290823517929765 0.45158350421508314 1.0 ['TMEM31|p.L93F|1|0.27|ENSG00000179363|chrX:103713768-103713768|C/T|missense_variant'] 10221 4055 CCCCCCCS True PC9_epitope_Rep5 826.10688658094 826.10578993586 20.671 2 -1.9293767682642042 0.45162200282087445 1.0 ['ENST00000531526.5_1_11:45944386-45945084:+|nuORF', 'nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF', 'ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 23523 22838 EVVPLCLPAP True PC9_epitope_Rep4 1036.5627036678798 1036.5616099358601 96.069 2 -1.9297567704316476 0.4516783474732571 1.0 ['ENST00000288943.4_1_2:96809359-96809716:-|nuORF'] 39358 22828 HKEEWIRW True PC9_epitope_Rep6 1182.5934266325398 1182.59179490379 100.9 3 -1.9298789722288947 0.4516783474732571 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 80413 25513 PGKHHRRR True PC9_epitope_Rep1 1042.60091205482 1042.59980993586 103.13 2 -1.930086350621505 0.4516783474732571 1.0 ['ENST00000315150.9_1_3:128813878-128840609:-|nuORF'] 26028 5957 FGGVITNN True H1975_Epitope_Rep3 820.4079172786401 820.40682993586 27.926 2 -1.9301196343314417 0.4516783474732571 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 63985 17168 LNVRKAAHEAL True NCI_RA007_Epitope_Rep5 1220.6989543302398 1220.6978499358602 72.809 2 -1.93021099626585 0.45169514510442094 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 22832 13211 EVAIKMIR True NCI_RA007_Epitope_Rep4 958.5633723742199 958.56226993586 57.941 2 -1.9304283476932316 0.4517010935601458 1.0 ['ENST00000511942.5_1_4:128802289-128804471:+|nuORF'] 59800 20122 LGEPVHPRV True PC9_epitope_Rep4 1002.5610638750999 1002.55996993586 85.534 2 -1.931169040276389 0.451767232962312 1.0 ['ENST00000445755.6_1_19:18054520-18054739:+|nuORF'] 94944 19191 RTILYQFSRA True PC9_epitope_Rep2 1253.68805529337 1253.6869499358602 79.19 2 -1.9312405483558805 0.451767232962312 1.0 ['WDFY3|p.Y2852Ifs*14|1|0.24|ENSG00000163625|chr4:84702395-84702395|A/-|frameshift_variant', 'nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.H2107L|1|0.65|ENSG00000163625|chr4:84740331-84740331|T/A|missense_variant'] 109367 5481 TCPVKYSTQ True H1975_Epitope_Rep3 1025.4851816231699 1025.48408993586 26.135 2 -1.9313984212371855 0.45177422679294 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'HYDIN|p.N3366Tfs*33|1|0.15|ENSG00000157423|chr16:70882778-70882778|T/-|frameshift_variant', 'HYDIN|p.I1870Kfs*10|1|0.33|ENSG00000157423|chr16:70970523-70970530|TTCTTCTA/-|frameshift_variant', 'HYDIN|p.Q2268Rfs*6|1|0.09|ENSG00000157423|chr16:70941687-70941687|G/-|frameshift_variant', 'HYDIN|p.R2422Gfs*41|1|0.09|ENSG00000157423|chr16:70921112-70921112|T/-|frameshift_variant', 'nc|ENSG00000157423|Q4G0P3-6|HYDIN', 'nc|ENSG00000157423|Q4G0P3-10|HYDIN', 'nc|ENSG00000157423|Q4G0P3-8|HYDIN', 'nc|ENSG00000157423|Q4G0P3-5|HYDIN'] 53727 7349 KSLREPVA True PC9_epitope_Rep1 898.5236157372199 898.52250993586 33.079 2 -1.9314115269551142 0.45177422679294 1.0 ['nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENSG00000115183|ENST00000263635|TANC1', 'ENST00000470074.1_1_2:160076105-160087520:+|nuORF'] 27251 9536 FLPPAPAA True PC9_epitope_Rep3 782.4326754744999 782.43156993586 41.626 2 -1.9314132694800323 0.45177422679294 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 59221 7906 LFEISKFYLKD True NCI_RA007_Epitope_Rep2 1401.75440351769 1401.75274490379 35.386 3 -1.9317038912782878 0.45179102210843763 1.0 ['ENSG00000172167|ENST00000305949|MTBP'] 69867 2931 LVHVKETVSKP True NCI_RA007_Epitope_Rep1 1235.72377209575 1235.72266993586 15.24 2 -1.931771215428569 0.45179696907238864 1.0 ['nc|ENSG00000180316|Q8N8W4-2|PNPLA1', 'nc|ENSG00000180316|Q8N8W4-3|PNPLA1', 'nc|ENSG00000180316|Q8N8W4|PNPLA1', 'ENSG00000180316|ENST00000636260|PNPLA1'] 115811 8700 TSDQEGDSSF True H1975_Epitope_Rep2 1071.39926263939 1071.39816993586 38.427 2 -1.931822746059197 0.4518137637767942 1.0 ['ENSG00000106404|ENST00000308344|CLDN15'] 76250 9869 NPIFWEEVS True H1975_Epitope_Rep3 1119.5236753068698 1119.52256993586 42.99 2 -1.9318553887929835 0.45182565682424664 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 116119 22756 TSSKGKKGKK True PC9_epitope_Rep2 1047.6400424717897 1047.6389499358602 93.024 2 -1.9319029950667408 0.45182565682424664 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 12914 4565 DLKIYVPDTIC True H1975_Epitope_Rep2 1278.6529752242598 1278.65131490379 22.665 3 -1.9320092265231716 0.4518424506709189 1.0 ['EFCAB5|p.R1329Efs*30|1|0.13|ENSG00000176927|chr17:30091917-30091917|C/-|frameshift_variant', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.F842Lfs*18|1|0.15|ENSG00000176927|chr17:30057821-30057822|-/ACTCTCACCTC|frameshift_variant', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-5|EFCAB5'] 111560 13424 TIAQEPKN True PC9_epitope_Rep5 899.4712458111899 899.47014993586 56.651 2 -1.9324270275727677 0.45184558480578785 1.0 ['ENSG00000179300|ENST00000321110|RTL3'] 34190 22471 GNGVLQVS True PC9_epitope_Rep2 772.40791727864 772.40682993586 91.923 2 -1.9324984699582781 0.45184558480578785 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 64798 17087 LQCCSFLRAI True PC9_epitope_Rep5 1152.57837081536 1152.5772699358602 70.746 2 -1.9324999052992013 0.45184558480578785 1.0 ['ENST00000476039.1_1_7:107592454-107592499:-|nuORF'] 70440 1894 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 9.8296 3 -1.9326060068418704 0.45184558480578785 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 135545 12895 WKQYRREESIW True NCI_RA007_Epitope_Rep2 1579.7895602397898 1579.7884699358601 54.779 2 -1.9326063720635125 0.45184558480578785 1.0 ['ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3', 'ENST00000377653.2_1_9:39174468-39266986:-|nuORF'] 38803 14550 HGWRYVRV True PC9_epitope_Rep4 1071.57263161831 1071.57152993586 63.879 2 -1.9326218071954897 0.45184558480578785 1.0 ['nc|ENSG00000125967|Q96P71-3|NECAB3', 'ENST00000488489.5_1_20:32247922-32262169:-|nuORF'] 72699 11694 MMLQDQEHHWY True H1975_Epitope_Rep2 1516.62275480848 1516.6216499358602 50.056 2 -1.9327625425036503 0.4518515304683602 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 46496 21474 ISVPLCPLYLR True PC9_epitope_Rep6 1272.72641494804 1272.7253099358602 95.477 2 -1.9328983423182264 0.45185257494902165 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 140005 20519 YQDQIPRTL True PC9_epitope_Rep3 1132.58767254576 1132.58656993586 84.187 2 -1.9328997874675067 0.45185257494902165 1.0 ['ENSG00000169018|ENST00000306917|FEM1B'] 109631 17293 TEAKAAAK True NCI_RA007_Epitope_Rep4 788.4392174069199 788.43812993586 74.878 2 -1.933260517692575 0.45187531182889 1.0 ['ENST00000568310.1_1_15:55677902-55790527:-|nuORF', 'nc|ENSG00000256061|Q8WXU2-3|DNAAF4', 'nc|ENSG00000256061|Q8WXU2-2|DNAAF4', 'ENST00000565113.5_1_15:55681617-55790527:-|nuORF', 'ENSG00000256061|ENST00000321149|DNAAF4'] 72112 24981 MFKRQIIQR True H1975_Epitope_Rep2 1218.7019315357 1218.70027490379 102.67 3 -1.933265466283906 0.45187531182889 1.0 ['nc|ENSG00000166762|Q96P56-3|CATSPER2', 'ENST00000469461.5_1_15:43927692-43940259:-|nuORF', 'nc|ENSG00000166762|Q96P56-2|CATSPER2', 'ENSG00000166762|ENST00000396879|CATSPER2'] 34191 22419 GNGVLQVS True PC9_epitope_Rep3 772.40791727864 772.40682993586 91.512 2 -1.9332980763212924 0.4518812568466035 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 37053 19905 GVPHLVSG True PC9_epitope_Rep3 764.4180880395201 764.41698993586 81.807 2 -1.9333035705661734 0.45188230062580664 1.0 ['ENST00000434316.6_1_13:114193706-114203864:+|nuORF', 'ENST00000460039.5_1_13:114200078-114203864:+|nuORF'] 32600 15363 GGHGRGAR True H1975_Epitope_Rep2 766.3946672563399 766.39356993586 64.252 2 -1.9333526668186671 0.45188230062580664 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 123190 23690 VGLCLFPIKYL True PC9_epitope_Rep5 1264.72535231888 1264.7242499358601 96.102 2 -1.933369708976539 0.45188543169173706 1.0 ['ENST00000309922.6_1_3:101284860-101285061:+|nuORF'] 91152 23390 RFYYVDHN True NCI_RA007_Epitope_Rep3 1112.5039429217998 1112.50284993586 101.55 2 -1.9334703253687617 0.45188543169173706 1.0 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2'] 124092 22914 VGSMLPGLPYH True H1975_Epitope_Rep1 1169.59031539805 1169.58920993586 95.288 2 -1.9335377813724894 0.45188543169173706 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 100350 15833 SKQKKRRY True H1975_Epitope_Rep3 1092.651610215 1092.65050993586 66.35 2 -1.9335711152139163 0.45188543169173706 1.0 ['ENST00000282964.5_1_21:21112145-21112373:+|nuORF'] 33674 6227 GLGRPLPAA True PC9_epitope_Rep3 850.5024863698198 850.50138993586 28.99 2 -1.9336852520663652 0.45188543169173706 1.0 ['ENST00000558634.5_1_14:24615961-24617291:+|nuORF'] 36248 14817 GVDPSGQG True NCI_RA007_Epitope_Rep4 715.31368254063 715.3131349679301 64.455 1 -1.933704627180908 0.45188543169173706 1.0 ['ENST00000318876.9_1_14:73437074-73437530:-|nuORF'] 116985 21638 TVGRRQTV True PC9_epitope_Rep2 915.52501271955 915.52390993586 88.705 2 -1.9337887754184604 0.4518913760194343 1.0 ['ENST00000324348.8_2_17:7818490-7818643:-|nuORF'] 102580 9183 SLWAWVERE True H1975_Epitope_Rep1 1174.5771078620598 1174.5760099358602 40.229 2 -1.9338123432476613 0.45189732021819995 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 24726 20615 FANYLVFL True H1975_Epitope_Rep2 985.5273041353299 985.52620993586 85.389 2 -1.9338713980837823 0.4519141090987962 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1'] 114597 22355 TQDNPPVF True NCI_RA007_Epitope_Rep4 916.4290466460399 916.4279499358599 96.994 2 -1.9342899219391767 0.45194872795887825 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 81183 22354 PKGKRGEK True PC9_epitope_Rep6 898.5348491272598 898.53374993586 98.956 2 -1.9343782776464133 0.45194872795887825 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF'] 69708 16303 LVEGFTIKKP True PC9_epitope_Rep2 1130.66994561774 1130.6683049037902 67.954 3 -1.9343979635144666 0.45194872795887825 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'ENST00000496526.5_1_3:9870593-9876502:+|nuORF', 'ENST00000473661.5_1_3:9867594-9876502:+|nuORF', 'nc|ENSG00000214021|Q9Y4R7-5|TTLL3', 'nc|ENSG00000214021|Q9Y4R7|TTLL3'] 141058 7252 YSNIEANESEE True NCI_RA007_Epitope_Rep3 1283.51535502079 1283.51424993586 35.636 2 -1.9344060078733982 0.45194872795887825 1.0 ['ENSG00000126247|ENST00000246533|CAPNS1'] 11511 8340 DFKGLGSG True PC9_epitope_Rep2 779.38136817763 779.38026993586 37.45 2 -1.9344636340307053 0.4519546711489454 1.0 ['ENST00000525582.1_1_1:26873450-26873871:+|nuORF'] 24938 22906 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 95.33 2 -1.9347482685365491 0.4519714583152598 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 135906 14438 WPRFCLYRE True PC9_epitope_Rep4 1268.6124478249596 1268.61079490379 63.444 3 -1.9349213280624131 0.4519774011299435 1.0 ['ENST00000474436.1_1_9:35089091-35089349:-|nuORF'] 88506 21041 QSVKTSAL True PC9_epitope_Rep6 832.4654321547599 832.46432993586 93.754 2 -1.9350735376474213 0.45198855011493255 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 39357 22424 HKEEWIRW True PC9_epitope_Rep6 1182.5934266325398 1182.59179490379 99.246 3 -1.935093620314268 0.45198855011493255 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 10838 25962 CTLREKNKW True NCI_RA007_Epitope_Rep2 1176.60736244452 1176.60571490379 110.11 3 -1.9351375590869864 0.45198855011493255 1.0 ['ENSG00000178404|ENST00000322630|CEP295NL'] 138116 19162 YGHSTVLI True NCI_RA007_Epitope_Rep5 888.4705175352 888.46942993586 80.578 2 -1.935154667494395 0.45198855011493255 1.0 ['ENSG00000124702|ENST00000326974|KLHDC3', 'ENST00000244670.12_1_6:42984918-42985899:+|nuORF'] 67100 17264 LSQHILLE True H1975_Epitope_Rep3 951.5389314481899 951.53838496793 72.05 1 -1.9351883509669918 0.45198855011493255 1.0 ['PPP1CA|p.P50H|1|0.29|ENSG00000172531|chr11:67401106-67401106|G/T|missense_variant'] 30951 17490 GARRAHRSV True NCI_RA007_Epitope_Rep5 1008.5689432201999 1008.56837496793 74.066 1 -1.9353160495102377 0.45198855011493255 1.0 ['ENST00000487162.1_1_22:50967153-50967951:-|nuORF'] 44199 17206 IIYWAKED True H1975_Epitope_Rep2 1036.5229470308798 1036.52184993586 71.473 2 -1.9353278879473543 0.45198855011493255 1.0 ['nc|ENSG00000091129|Q92823-4|NRCAM', 'NRCAM|p.D610Tfs*44|1|0.27|ENSG00000091129|chr7:108191804-108191804|C/-|frameshift_variant', 'nc|ENSG00000091129|Q92823-3|NRCAM', 'nc|ENSG00000091129|Q92823-6|NRCAM', 'nc|ENSG00000091129|Q92823-2|NRCAM', 'ENSG00000091129|ENST00000379028|NRCAM', 'nc|ENSG00000091129|Q92823-5|NRCAM'] 123666 6132 VGQQQGLP True PC9_epitope_Rep3 825.4344663796498 825.43336993586 28.634 2 -1.9354873717348446 0.45198855011493255 1.0 ['ENSG00000100393|ENST00000263253|EP300'] 61557 23718 LKIELYKKTK True NCI_RA007_Epitope_Rep3 1262.7962087600197 1262.7951099358602 102.82 2 -1.9355004768806587 0.45198855011493255 1.0 ['nc|ENSG00000138336|Q8NFU7-4|TET1'] 100117 16439 SISPGRTTFP True PC9_epitope_Rep5 1061.55055876105 1061.54946993586 68.231 2 -1.9356961629978575 0.45198855011493255 1.0 ['ENST00000585075.1_1_17:73267491-73267800:+|nuORF', 'ENST00000582668.1_1_17:73267497-73269738:+|nuORF'] 131021 5582 VTDRDIDRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 26.476 2 -1.9358080048381765 0.45198855011493255 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 133057 26299 VVPQLKYKV True PC9_epitope_Rep3 1072.6644663144798 1072.6633699358601 107.36 2 -1.9360777525349488 0.45198959123929305 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 74583 19103 NGEQIIRRR True NCI_RA007_Epitope_Rep1 1140.64758746372 1140.64648993586 78.447 2 -1.9360901933022239 0.45198959123929305 1.0 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 48646 18206 KARGAPRG True NCI_RA007_Epitope_Rep2 811.4776686043099 811.47656993586 75.575 2 -1.9363209472756346 0.4519906323185012 1.0 ['SYTL2|p.P780Qfs*19|1|0.57|ENSG00000137501|chr11:85700529-85700529|G/-|frameshift_variant', 'ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 64128 10916 LPENDERP True PC9_epitope_Rep2 968.4563240230399 968.45522993586 47.311 2 -1.936324218752279 0.4519906323185012 1.0 ['ENSG00000169291|ENST00000304760|SHE'] 97149 24188 SDRKKRAL True PC9_epitope_Rep4 972.5828619488399 972.58176993586 101.52 2 -1.9364303845685173 0.4519965738943762 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 74337 18611 NENYDYLKG True PC9_epitope_Rep2 1114.49310345458 1114.4925749679298 76.945 1 -1.936536245296289 0.45200355609523396 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'ENST00000469881.1_1_11:3697391-3700990:-|nuORF'] 66815 20527 LSLYLIHKRTH True NCI_RA007_Epitope_Rep2 1379.8037537519501 1379.80264993586 84.918 2 -1.9365871356579853 0.45200355609523396 1.0 ['ENSG00000257591|ENST00000439556|ZNF625', 'nc|ENSG00000257591|Q96I27|ZNF625', 'nc|ENSG00000197647|Q8N7K0-2|ZNF433', 'ENSG00000197647|ENST00000550507|ZNF433', 'nc|ENSG00000197647|Q8N7K0|ZNF433'] 131319 18515 VTGKEYSV True PC9_epitope_Rep1 881.44944773745 881.4488949679301 76.007 1 -1.9365944440844347 0.45200355609523396 1.0 ['ENST00000552656.5_1_12:56610319-56615704:-|nuORF', 'ENST00000345093.8_1_12:56610319-56615573:-|nuORF'] 65606 24484 LRWLQLYIYK True PC9_epitope_Rep4 1394.8074421500598 1394.80634993586 102.66 2 -1.9370018662593922 0.45200563746747613 1.0 ['ENSG00000101323|ENST00000378789|HAO1'] 43304 23083 IFVFMFPL True H1975_Epitope_Rep3 1012.5455970517598 1012.54448993586 96.402 2 -1.9370417940189555 0.45200563746747613 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 32571 6869 GGGREACH True NCI_RA007_Epitope_Rep2 785.3238703848499 785.32332496793 31.334 1 -1.9371008486232892 0.45200563746747613 1.0 ['ENST00000235307.6_1_1:184356254-184446568:+|nuORF'] 22651 17296 ETPLLKNDP True PC9_epitope_Rep4 1025.53932537101 1025.53822993586 74.532 2 -1.9371367504500379 0.45200563746747613 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 123270 19277 VGLLDMNK True PC9_epitope_Rep5 888.47388866348 888.47278993586 79.192 2 -1.9373129898452113 0.4520077186592082 1.0 ['PDE6B|p.T281N|1|0.11|ENSG00000133256|chr4:653982-653982|C/A|missense_variant'] 30914 19528 GAQPDGEP True H1975_Epitope_Rep2 769.32424722433 769.32369496793 81.034 1 -1.9373949296777753 0.4520077186592082 1.0 ['IRS4|p.G572Vfs*32|1|0.31|ENSG00000133124|chrX:108734630-108734631|-/A|frameshift_variant', 'IRS4|p.A1032Cfs*2|1|0.54|ENSG00000133124|chrX:108733251-108733252|-/A|frameshift_variant', 'ENSG00000133124|ENST00000372129|IRS4', 'nc|ENSG00000133124|O14654|IRS4', 'IRS4|p.G575Dfs*36|1|0.72|ENSG00000133124|chrX:108734621-108734621|C/-|frameshift_variant'] 60016 16602 LGKIALGK True PC9_epitope_Rep3 798.5327238689399 798.53162993586 68.997 2 -1.9374200971543611 0.4520077186592082 1.0 ['ENST00000315366.7_1_4:114900537-114900573:-|nuORF'] 36462 12603 GVGGGFGGG True NCI_RA007_Epitope_Rep1 663.2976385536699 663.2970949679301 53.005 1 -1.9374448555383552 0.4520077186592082 1.0 ['CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15'] 41104 6550 HTVEAAPP True NCI_RA007_Epitope_Rep1 820.4079172786398 820.40682993586 29.493 2 -1.9375075410994815 0.4520136592769256 1.0 ['ENST00000342572.12_1_17:80400840-80401323:-|nuORF'] 52599 25287 KLKVFVRPT True PC9_epitope_Rep2 1086.6913497686598 1086.6907749679299 102.94 1 -1.937728041926366 0.4520195997658435 1.0 ['ENSG00000184349|ENST00000333274|EFNA5', 'ENST00000510359.1_1_5:106716958-106724204:-|nuORF'] 77167 17657 NRQQKVIP True NCI_RA007_Epitope_Rep1 981.5719629119699 981.57086993586 72.817 2 -1.9379565780804104 0.45203638058690254 1.0 ['nc|ENSG00000115459|Q96FG2-6|ELMOD3', 'ENST00000423095.7_1_2:85614321-85618082:+|nuORF', 'ENST00000410106.5_1_2:85598540-85618082:+|nuORF', 'ENSG00000115459|ENST00000409013|ELMOD3', 'ENST00000490508.5_1_2:85582731-85618082:+|nuORF'] 63983 16711 LNVRKAAHEAL True NCI_RA007_Epitope_Rep3 1220.6989543302398 1220.6978499358602 73.549 2 -1.9384850808460015 0.45207484173098605 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 32601 14889 GGHGRGAR True NCI_RA007_Epitope_Rep4 766.3946672563399 766.39356993586 64.734 2 -1.9386956038051775 0.45209756097560977 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 100555 17412 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 72.234 2 -1.9387502237225902 0.45209756097560977 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 10521 19799 CLASSARS True PC9_epitope_Rep4 793.3752372513701 793.37412993586 84.284 2 -1.9393995904538919 0.45211047759446743 1.0 ['ENSG00000115318|ENST00000264094|LOXL3', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3'] 124307 12349 VGTPIDGKS True NCI_RA007_Epitope_Rep5 872.46034677432 872.4597949679301 54.148 1 -1.9394292622705684 0.45211047759446743 1.0 ['PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant'] 88907 4432 QVERVGDIEE True NCI_RA007_Epitope_Rep4 1172.5673310239997 1172.56622993586 23.411 2 -1.9394950624174674 0.45211047759446743 1.0 ['ENST00000546687.1_1_12:113321187-113328809:+|nuORF', 'ENST00000549913.6_1_12:113307544-113334582:+|nuORF', 'nc|ENSG00000089169|Q9Y2J0-2|RPH3A', 'ENSG00000089169|ENST00000389385|RPH3A'] 122017 22746 VFVLPFPV True PC9_epitope_Rep2 916.5422259234799 916.54112993586 92.987 2 -1.9395174901873067 0.45211047759446743 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 117196 18536 TVLGSLWGRV True PC9_epitope_Rep4 1086.61857875122 1086.61748993586 79.373 2 -1.9396562333707994 0.45211151578217135 1.0 ['TG|p.E940Kfs*26|1|0.43|ENSG00000042832|chr8:132893745-132893745|G/-|frameshift_variant'] 16969 6012 EFVSLVTG True H1975_Epitope_Rep3 850.4436340810199 850.44252993586 28.138 2 -1.9397173253726716 0.45211151578217135 1.0 ['ENSG00000010292|ENST00000315579|NCAPD2'] 90974 27214 RFCHHQAC True PC9_epitope_Rep3 1000.4119741966 1000.41086993586 112.0 2 -1.9400023713555026 0.4521174545020974 1.0 ['L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|120|3|sense', 'L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|153|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|150|3|sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|17|1|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|119|3|sense'] 117116 15646 TVKETTRT True PC9_epitope_Rep1 934.5083595959 934.50726993586 65.003 2 -1.940202289846489 0.4521184925047963 1.0 ['DCAF16|p.E193Q|1|0.16|ENSG00000163257|chr4:17803565-17803565|C/G|missense_variant', 'ENSG00000163257|ENST00000382247|DCAF16'] 80555 7132 PGPLSKQGS True PC9_epitope_Rep6 869.46068112749 869.45958993586 36.494 2 -1.9402709563128557 0.4521184925047963 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 33296 25372 GKPFNQRSLL True PC9_epitope_Rep2 1158.6509415086598 1158.6498499358602 103.27 2 -1.9404479099107084 0.45211953046249226 1.0 ['nc|ENSG00000198556|Q5FWF6-2|ZNF789', 'ENSG00000198556|ENST00000331410|ZNF789'] 97186 24320 SDVVEVRLANR True PC9_epitope_Rep4 1256.6836981889198 1256.68260993586 102.03 2 -1.940491266673436 0.45211953046249226 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 6051 22488 APLKIKTM True PC9_epitope_Rep4 900.54665968092 900.54556993586 94.731 2 -1.9406047283738952 0.4521296195946678 1.0 ['ENST00000411807.1_1_11:5543719-5544284:-|nuORF'] 33556 10439 GLELLTSGDPP True NCI_RA007_Epitope_Rep2 1097.56045473841 1097.5593499358602 45.197 2 -1.940994677254987 0.4521296195946678 1.0 ['nc|ENSG00000162924|Q04864|REL'] 121271 17089 VETICRAI True PC9_epitope_Rep5 903.4847877003499 903.48368993586 70.754 2 -1.9410439135425681 0.4521296195946678 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 43530 13430 IGPIQQII True PC9_epitope_Rep1 880.5382031721999 880.53710993586 56.519 2 -1.9410548941386585 0.4521296195946678 1.0 ['ENST00000367833.6_1_1:168154054-168154114:+|nuORF'] 33448 16718 GLANKAAA True H1975_Epitope_Rep3 714.4024379753799 714.4018849679301 69.833 1 -1.9411168136656352 0.4521296195946678 1.0 ['ENST00000409226.5_1_2:201676959-201677028:+|nuORF'] 87102 12894 QNRRMKWKRSK True H1975_Epitope_Rep3 1516.85211801004 1516.8510299358602 54.822 2 -1.9412426960353042 0.4521296195946678 1.0 ['ENSG00000130675|ENST00000252971|MNX1', 'nc|ENSG00000130675|P50219-2|MNX1'] 58554 23558 LEQLMKDPLRP True PC9_epitope_Rep1 1338.7329568804598 1338.73184993586 95.406 2 -1.9412474675647373 0.4521296195946678 1.0 ['ENSG00000086544|ENST00000263370|ITPKC'] 79776 24283 PEDCGQPGS True PC9_epitope_Rep3 888.3283466286 888.32724993586 98.718 2 -1.9412894044693663 0.4521296195946678 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 10615 4951 CNICVLYQT True PC9_epitope_Rep5 1055.47798806775 1055.47688993586 24.08 2 -1.9413323446178723 0.4521296195946678 1.0 ['ENSG00000151148|ENST00000342494|UBE3B', 'nc|ENSG00000151148|Q7Z3V4-2|UBE3B', 'ENST00000535900.5_1_12:109939233-109948161:+|nuORF'] 22131 10069 ESRIKSYSPY True H1975_Epitope_Rep3 1228.60880191316 1228.6077099358602 43.77 2 -1.9416393901278184 0.4521523322351309 1.0 ['ENSG00000150457|ENST00000382592|LATS2'] 60484 22629 LHAAAAAA True H1975_Epitope_Rep2 694.37622322754 694.3756749679301 93.483 1 -1.941644657836897 0.4521523322351309 1.0 ['ENSG00000125816|ENST00000351817|NKX2-4', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 60487 22538 LHAAAAAA True NCI_RA007_Epitope_Rep5 694.37622322754 694.3756749679301 93.874 1 -1.9416783145874013 0.4521533693131326 1.0 ['ENSG00000125816|ENST00000351817|NKX2-4', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 85005 14883 QEGCTKGK True H1975_Epitope_Rep1 849.4014519992098 849.40090496793 62.482 1 -1.9416806360560608 0.4521533693131326 1.0 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1'] 135685 26556 WLPTMRNLF True PC9_epitope_Rep1 1176.6113851958 1176.60973490379 107.84 3 -1.9418779323514224 0.45215544333427254 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 123871 21781 VGRRAAKA True PC9_epitope_Rep1 827.5089687325898 827.5084249679301 88.609 1 -1.9419060256122342 0.45215544333427254 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 120566 20966 VEGLRRQSPP True H1975_Epitope_Rep3 1137.6254550368099 1137.6243499358602 87.57 2 -1.9419388740749683 0.45215544333427254 1.0 ['ENSG00000150977|ENST00000280571|RILPL2'] 123208 12623 VGLEPGTRYN True NCI_RA007_Epitope_Rep3 1104.55637241748 1104.55526993586 56.897 2 -1.9419548168229137 0.45215544333427254 1.0 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 124090 4596 VGSMFFPF True PC9_epitope_Rep5 930.4309612223399 930.42986993586 22.738 2 -1.9421836208818721 0.4521613801623338 1.0 ['ENST00000310015.10_1_2:174820725-174820848:-|nuORF'] 80605 22490 PGQQGHTP True NCI_RA007_Epitope_Rep4 820.3827651599601 820.38166993586 97.595 2 -1.9423085542619745 0.4521655271056595 1.0 ['ENSG00000182795|ENST00000359470|C1orf116'] 18994 10112 ELEQRYMD True H1975_Epitope_Rep1 1082.47025983502 1082.46916993586 43.832 2 -1.942455499588184 0.4521655271056595 1.0 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 13301 6537 DLTNLHQHETA True NCI_RA007_Epitope_Rep2 1277.60002813461 1277.59892993586 30.038 2 -1.9426890899085354 0.4521655271056595 1.0 ['TMCC3|p.D345N|1|0.1|ENSG00000057704|chr12:94578492-94578492|C/T|missense_variant'] 89834 26601 RAPRPLHKV True PC9_epitope_Rep5 1072.66178097588 1072.66068993586 108.39 2 -1.942696998299696 0.4521655271056595 1.0 ['ITPA|p.C76Sfs*33|1|0.11|ENSG00000125877|chr20:3214020-3214021|-/AGCCACTTCCTGGTTCATAGACACTGTCTTT|frameshift_variant'] 122711 7691 VGGGRQRPPQ True H1975_Epitope_Rep1 1050.56827451386 1050.5671699358602 34.549 2 -1.9427980332226022 0.4521655271056595 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'FAM120A|p.V222Sfs*18|1|0.06|ENSG00000048828|chr9:93471326-93471348|TGAAGTTGCCAAGCAACTGGACC/-|frameshift_variant'] 96941 5720 SAVSSYRGPE True NCI_RA007_Epitope_Rep4 1051.4934378077498 1051.4923499358601 28.616 2 -1.9428394976119128 0.4521655271056595 1.0 ['ENST00000470238.1_1_1:169838129-169857981:-|nuORF'] 7621 9235 ASGESQQSP True H1975_Epitope_Rep3 889.37773934917 889.3771949679301 40.514 1 -1.9429427034900084 0.4521655271056595 1.0 ['nc|ENSG00000290757|Q5NE16|CTSL3P'] 8838 10227 AVELDSESRY True H1975_Epitope_Rep3 1167.54078192299 1167.53968993586 44.386 2 -1.942954398333964 0.4521655271056595 1.0 ['ENSG00000158411|ENST00000289359|MITD1'] 36531 9734 GVGQVLGP True NCI_RA007_Epitope_Rep3 725.4071890026498 725.4066449679301 45.358 1 -1.9430981935956546 0.45216656372915515 1.0 ['ENST00000478597.5_1_9:140007734-140009165:-|nuORF'] 104676 9320 SQTQKAKFS True PC9_epitope_Rep4 1023.5349086969098 1023.5343749679301 43.458 1 -1.9431604711765562 0.45216656372915515 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 100557 17594 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 72.954 2 -1.9433044755509183 0.4521776814734561 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 37768 14295 GYADPLRH True PC9_epitope_Rep1 927.4562644533901 927.45571496793 59.81 1 -1.9433522825557576 0.4521776814734561 1.0 ['HOXB6|p.L183Cfs*3|1|0.13|ENSG00000108511|chr17:48596541-48596541|G/-|frameshift_variant', 'ENSG00000108511|ENST00000225648|HOXB6', 'nc|ENSG00000108511|P17509-2|HOXB6'] 60624 22962 LHIKAARGAR True PC9_epitope_Rep1 1091.6675946323098 1091.66648993586 93.124 2 -1.9434781300549637 0.4521776814734561 1.0 ['ENST00000512974.5_1_5:71403115-71403284:+|nuORF'] 23239 8167 EVNIGNSQTR True NCI_RA007_Epitope_Rep5 1116.5523496662001 1116.5512499358601 38.097 2 -1.9434936099337747 0.4521776814734561 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 70430 1173 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 6.1315 3 -1.9435181648052646 0.4521776814734561 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 65030 25180 LQKAFAAA True PC9_epitope_Rep3 818.4650382319398 818.46448496793 102.21 1 -1.9436111801937768 0.4521776814734561 1.0 ['ENSG00000171060|ENST00000304519|C8orf74'] 59459 6667 LFPWYRYKTYY True NCI_RA007_Epitope_Rep1 1598.79218600874 1598.7899798717199 29.944 4 -1.9436122313489184 0.4521776814734561 1.0 ['nc|ENSG00000125107|A5YKK6-4|CNOT1'] 102014 7471 SLQQVQIV True PC9_epitope_Rep4 913.5232813840499 913.52218993586 36.093 2 -1.9436320862170988 0.4521776814734561 1.0 ['ENSG00000105866|ENST00000222584|SP4'] 122126 8429 VGAGAGGG True H1975_Epitope_Rep2 544.2605247689601 544.25997496793 37.375 1 -1.9437169798810778 0.4521776814734561 1.0 ['ENSG00000116954|ENST00000373001|RRAGC', 'ENST00000537025.6_1_17:66032291-66032333:+|nuORF'] 70441 1960 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 10.168 3 -1.9439058346851044 0.4521776814734561 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 14557 23292 DTTEHGHP True NCI_RA007_Epitope_Rep3 892.36750901864 892.36640993586 101.17 2 -1.9439674158373748 0.4521776814734561 1.0 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 19534 10067 ELPSASRL True PC9_epitope_Rep4 871.47633119163 871.4752299358599 46.39 2 -1.9441884669637999 0.4521926593578021 1.0 ['ENST00000345133.9_1_18:3451670-3451733:+|nuORF'] 46354 15078 ISREWPDP True PC9_epitope_Rep1 998.4821448480599 998.48104993586 62.816 2 -1.9442395695481023 0.4521926593578021 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4', 'NLRP4|p.E797Nfs*16|1|0.56|ENSG00000160505|chr19:55870861-55870861|G/-|frameshift_variant'] 53281 25454 KQKQPRKKI True PC9_epitope_Rep2 1152.7455105998397 1152.7438649037902 103.59 3 -1.9442677183908343 0.4521926593578021 1.0 ['ENST00000283195.10_1_2:109384301-109384340:+|nuORF'] 115988 23330 TSKPKDVD True PC9_epitope_Rep4 888.4552613938798 888.45416993586 97.998 2 -1.944412721392805 0.4521926593578021 1.0 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 52807 6799 KNVVLVASP True NCI_RA007_Epitope_Rep3 925.5596668927699 925.55856993586 33.85 2 -1.9444673594398239 0.4521926593578021 1.0 ['nc|ENSG00000147724|Q49AJ0-2|FAM135B', 'ENST00000482951.6_1_8:139144838-139379577:-|nuORF', 'ENSG00000147724|ENST00000395297|FAM135B'] 93560 12732 RQLMPPPAFPV True PC9_epitope_Rep5 1251.67979910879 1251.67870993586 53.982 2 -1.9446263407415865 0.4521926593578021 1.0 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 62675 23848 LLLKRKLLL True PC9_epitope_Rep1 1108.80598559808 1108.80488993586 96.531 2 -1.9448031172663254 0.4521926593578021 1.0 ['ENST00000342992.10_3_2:179510673-179515519:-|nuORF'] 104528 20516 SQPEDVLYY True NCI_RA007_Epitope_Rep5 1112.50260550912 1112.5015099358602 85.857 2 -1.9448636033088915 0.4521926593578021 1.0 ['nc|ENSG00000109680|Q8N5T2-2|TBC1D19', 'ENSG00000109680|ENST00000264866|TBC1D19', 'ENST00000502873.5_1_4:26585743-26755545:+|nuORF'] 118848 16777 VAARSVPR True H1975_Epitope_Rep3 854.50863437942 854.50752993586 70.079 2 -1.9453082833142903 0.45227442611229673 1.0 ['ENST00000418460.2_1_1:232941107-232941410:+|nuORF'] 134983 22678 WCPRELKID True NCI_RA007_Epitope_Rep2 1158.5855643707798 1158.58390490379 94.38 3 -1.945469883804962 0.452291192720182 1.0 ['ENSG00000104290|ENST00000240093|FZD3'] 70719 5349 LWRIYSYSYLF True NCI_RA007_Epitope_Rep2 1509.7656369077301 1509.76399490379 25.425 3 -1.9457300916961782 0.4523089922329466 1.0 ['ENSG00000143199|ENST00000367851|ADCY10', 'nc|ENSG00000143199|Q96PN6-4|ADCY10', 'nc|ENSG00000143199|Q96PN6-2|ADCY10', 'nc|ENSG00000143199|Q96PN6-3|ADCY10'] 86080 21207 QHSLGPPW True PC9_epitope_Rep6 920.4504507969599 920.44934993586 94.421 2 -1.9457433764779068 0.4523089922329466 1.0 ['ENST00000448927.1_1_21:45751689-45751905:+|nuORF'] 12926 17056 DLKNCYSEN True PC9_epitope_Rep2 1084.44952439044 1084.44842993586 70.857 2 -1.9457665803119097 0.4523089922329466 1.0 ['ENSG00000115008|ENST00000263339|IL1A'] 72773 18690 MNVRILRRHL True NCI_RA007_Epitope_Rep3 1306.77682781146 1306.7751749037902 81.749 3 -1.946007418209433 0.45231002545631804 1.0 ['ENST00000430298.6_1_19:12222347-12224207:+|nuORF'] 123896 22205 VGRRRRHR True PC9_epitope_Rep4 1091.6649092937098 1091.66437496793 93.656 1 -1.9460101801784755 0.45231002545631804 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 89816 23860 RALQTLHV True H1975_Epitope_Rep2 936.5504991914 936.54940993586 98.288 2 -1.9463023656512095 0.45232292377517086 1.0 ['ENST00000534939.2_2_15:63892815-63893235:+|nuORF', 'ENSG00000197361|ENST00000638704|FBXL22'] 106587 17128 STPCKNGA True NCI_RA007_Epitope_Rep4 776.34868815036 776.34758993586 74.2 2 -1.9463719148922582 0.45232292377517086 1.0 ['ENSG00000148400|ENST00000651671|NOTCH1', 'NOTCH1|p.D1815Gfs*19|1|0.53|ENSG00000148400|chr9:136502029-136502030|-/C|frameshift_variant'] 125291 17303 VILYAQPSERS True H1975_Epitope_Rep1 1261.6666511424498 1261.66554993586 72.016 2 -1.946398987469574 0.45232292377517086 1.0 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF'] 66530 19033 LSHRRRRR True NCI_RA007_Epitope_Rep1 1135.69112404155 1135.69057496793 78.175 1 -1.9464108442613586 0.45232292377517086 1.0 ['ENST00000376395.8_2_9:86322580-86322796:-|nuORF'] 52996 22780 KPGTVVARVS True PC9_epitope_Rep2 1012.6029286870798 1012.60182993586 93.111 2 -1.9465372289127942 0.452327054924345 1.0 ['nc|ENSG00000141519|Q4G0X9-5|CCDC40'] 56674 24664 LDKFYKRK True H1975_Epitope_Rep2 1096.6393141958 1096.63820993586 101.43 2 -1.9466386834148237 0.452327054924345 1.0 ['ENSG00000156502|ENST00000359655|SUPV3L1', 'SUPV3L1|p.D552Ifs*8|1|0.14|ENSG00000156502|chr10:69202918-69202921|ATGG/-|frameshift_variant'] 33335 24217 GKPSRRPQNKR True PC9_epitope_Rep5 1322.76434855146 1322.7632499358601 98.154 2 -1.9469003753857792 0.452327054924345 1.0 ['ENST00000539322.5_1_16:19566903-19576184:+|nuORF'] 11614 10813 DGGTVWLEVL True NCI_RA007_Epitope_Rep2 1087.5549754351498 1087.5538699358601 46.664 2 -1.946910438298338 0.452327054924345 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2'] 135877 19106 WPHRYLTYRYF True NCI_RA007_Epitope_Rep1 1600.7939173442398 1600.79282993586 78.458 2 -1.946993590942668 0.452327054924345 1.0 ['ENSG00000174792|ENST00000311623|ODAPH'] 39505 11227 HLEILEFVQEA True NCI_RA007_Epitope_Rep2 1326.6819668534201 1326.68086993586 48.257 2 -1.9471515100662247 0.452327054924345 1.0 ['PLCB1|p.P1158H|2|0.22|ENSG00000182621|chr20:8881671-8881671|C/A|missense_variant'] 70445 2305 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 11.907 3 -1.9471580873629197 0.452327054924345 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 49324 11243 KERQEQRQRHE True H1975_Epitope_Rep1 1522.7712844066998 1522.7701899358601 48.222 2 -1.947180465297038 0.452327054924345 1.0 ['ENST00000394009.4_1_14:74486078-74489636:+|nuORF'] 62107 5720 LLEDQLFIPDD True H1975_Epitope_Rep1 1316.6499980187998 1316.64890993586 27.072 2 -1.9475609215652938 0.4523636757459252 1.0 ['ADAM21|p.C496Vfs*50|1|0.25|ENSG00000139985|chr14:70458981-70458981|C/-|frameshift_variant', 'ENST00000530196.1_1_14:70713981-70714470:-|nuORF', 'ENSG00000139985|ENST00000603540|ADAM21'] 94865 25656 RSYKQKKK True PC9_epitope_Rep1 1064.6454622054 1064.6443699358601 103.72 2 -1.9476637216097312 0.4523636757459252 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 136928 23194 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 96.477 2 -1.9476812782742063 0.4523636757459252 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 81182 17149 PKGKRGEK True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 72.734 2 -1.9479144798359067 0.4523636757459252 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF'] 108138 21828 SYEVPGVKGDV True PC9_epitope_Rep1 1148.57135377528 1148.5702499358601 88.772 2 -1.948055419800482 0.4523636757459252 1.0 ['ENST00000380770.3_1_19:10397831-10398857:+|nuORF', 'nc|ENSG00000105371|Q14773-3|ICAM4'] 49566 15921 KFPFFTRP True H1975_Epitope_Rep2 1038.5650866263798 1038.56398993586 66.441 2 -1.9481469705320333 0.4523636757459252 1.0 ['KCNK18|p.S178Y|1|0.22|ENSG00000186795|chr10:117209677-117209677|C/A|missense_variant', 'KCNK18|p.S178P|1|0.17|ENSG00000186795|chr10:117209676-117209676|T/C|missense_variant', 'ENSG00000186795|ENST00000334549|KCNK18'] 121755 11918 VFLYPFLKWWR True H1975_Epitope_Rep3 1553.8547266956498 1553.85362993586 50.995 2 -1.9481764046662473 0.4523636757459252 1.0 ['ENST00000524250.5_1_5:154200818-154203152:-|nuORF', 'ENST00000423554.5_1_5:154202945-154230090:-|nuORF', 'FAXDC2|p.A254Rfs*24|1|0.05|ENSG00000170271|chr5:154821345-154821346|-/ACTGGTATCT|frameshift_variant', 'nc|ENSG00000170271|Q96IV6-2|FAXDC2', 'ENSG00000170271|ENST00000326080|FAXDC2'] 12316 16660 DIPMVCPD True PC9_epitope_Rep1 888.37212601688 888.37102993586 68.911 2 -1.948239964102172 0.4523636757459252 1.0 ['CON__Q6IFU5', 'ENSG00000204889|ENST00000377755|KRT40'] 128748 17565 VPYHYFEK True NCI_RA007_Epitope_Rep3 1081.52328138405 1081.52218993586 77.054 2 -1.948324054445676 0.4523647075386898 1.0 ['ENSG00000136840|ENST00000335791|ST6GALNAC4', 'ENST00000495983.1_1_9:130670673-130672537:-|nuORF'] 71942 16951 MERIVICLMV True H1975_Epitope_Rep1 1205.63344316333 1205.63234993586 70.622 2 -1.9483957437772137 0.4523647075386898 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 79511 14807 PCFSLTHT True NCI_RA007_Epitope_Rep5 904.4112884069201 904.41018993586 63.627 2 -1.9488573100338416 0.4523873986073057 1.0 ['nc|ENSG00000259527|Q96N35|LINC00052'] 75542 21986 NKYAFGPR True H1975_Epitope_Rep2 951.4926499621099 951.49154993586 90.895 2 -1.9489679668154418 0.4523873986073057 1.0 ['ENST00000432854.5_1_7:44100999-44101362:+|nuORF'] 65192 6114 LQQYRQDQRDG True NCI_RA007_Epitope_Rep2 1405.6698390299298 1405.6687499358602 28.388 2 -1.9491599343334673 0.45239332900151613 1.0 ['ENSG00000118971|ENST00000261254|CCND2'] 80135 19307 PFPSKRLQLE True PC9_epitope_Rep4 1213.68190728377 1213.68080993586 82.372 2 -1.9491884941835362 0.4523953911461492 1.0 ['ENST00000392952.7_1_10:116193119-116193278:-|nuORF'] 63237 15927 LLSKKLIYFQL True NCI_RA007_Epitope_Rep5 1364.84315895244 1364.84206993586 67.99 2 -1.9493326177152417 0.4523953911461492 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 32466 24722 GGASKWPV True H1975_Epitope_Rep1 800.4180880395198 800.41698993586 102.41 2 -1.9493643068164577 0.4523953911461492 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 124380 12189 VGVAGKFV True PC9_epitope_Rep3 775.4592245755099 775.45812993586 51.918 2 -1.9494441462139729 0.4523953911461492 1.0 ['ENSG00000136381|ENST00000258886|IREB2'] 68010 12806 LTDHVVPL True PC9_epitope_Rep5 892.50181766348 892.50072993586 54.269 2 -1.949686598598991 0.45242607010211044 1.0 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7', 'F7|p.E325Rfs*6|1|0.65|ENSG00000057593|chr13:113118576-113118577|-/C|frameshift_variant'] 88065 17315 QRRAENLKRR True NCI_RA007_Epitope_Rep4 1325.7752475883296 1325.7741499358601 74.983 2 -1.9498370541014518 0.45242607010211044 1.0 ['nc|ENSG00000110104|Q9H6F5-2|CCDC86', 'ENSG00000110104|ENST00000227520|CCDC86'] 48577 24867 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 102.97 3 -1.9499065055136213 0.45242607010211044 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 32603 21082 GGHGRGAR True PC9_epitope_Rep3 766.3946672563399 766.39356993586 86.373 2 -1.9499295671976582 0.45242607010211044 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 70458 26128 LVTVLQRRRP True H1975_Epitope_Rep3 1236.7778733572798 1236.77623490379 108.87 3 -1.950029162366406 0.45242607010211044 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 133334 24901 VVVAVLHA True PC9_epitope_Rep4 806.50142374066 806.50087496793 104.3 1 -1.950165287747997 0.45242607010211044 1.0 ['ENST00000502486.5_2_4:42153705-42154329:-|nuORF'] 140527 23403 YRNMKEILTK True PC9_epitope_Rep2 1294.7067421326199 1294.70564993586 95.495 2 -1.950168036648361 0.45242607010211044 1.0 ['ENSG00000163818|ENST00000296135|LZTFL1', 'ENST00000478551.1_1_3:45868846-45870002:-|nuORF', 'ENST00000469874.5_1_3:45867808-45883491:-|nuORF', 'nc|ENSG00000163818|Q9NQ48-2|LZTFL1'] 122947 20301 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 85.027 2 -1.950591764482642 0.452448756402066 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 61783 5807 LLAMKPPG True PC9_epitope_Rep3 825.4782457679298 825.47714993586 27.407 2 -1.9506425406505656 0.452448756402066 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 99580 9097 SIEPKKTK True PC9_epitope_Rep3 929.55458151233 929.55348993586 39.931 2 -1.9506834173493557 0.45245468523290816 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ENST00000555263.1_1_14:96755932-96756910:-|nuORF'] 88505 22239 QSVKTSAL True PC9_epitope_Rep4 832.4654321547599 832.46432993586 93.78 2 -1.9507465357252989 0.45246061393535814 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 93089 22629 RPNHHHRR True PC9_epitope_Rep6 1108.58632461984 1108.5857749679299 100.09 1 -1.9509324691115193 0.4524843274613194 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 95020 20073 RTRLRNRRY True H1975_Epitope_Rep2 1289.7541182209297 1289.75302993586 83.191 2 -1.9509882346825806 0.4524843274613194 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 135518 12466 WKHVRYQMPVP True NCI_RA007_Epitope_Rep1 1439.7496100041099 1439.74850993586 52.468 2 -1.951211425946435 0.4524843274613194 1.0 ['ENSG00000115602|ENST00000233954|IL1RL1'] 39355 24551 HKEEWIRW True PC9_epitope_Rep3 1182.5934266325398 1182.59179490379 99.79 3 -1.9512402010501089 0.4524843274613194 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 126734 24364 VLPGKKKKKT True NCI_RA007_Epitope_Rep2 1125.75976368165 1125.75917496793 102.33 1 -1.9513204337202983 0.4525119099177133 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 10491 22306 CITPKRRLTR True NCI_RA007_Epitope_Rep3 1242.7342942931398 1242.73264490379 96.94 3 -1.951546548498047 0.45251783761544373 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 130597 6896 VSSHYILE True PC9_epitope_Rep4 946.47599683846 946.47488993586 33.75 2 -1.9517486609172345 0.4525464466675328 1.0 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66103079-66103478:-|nuORF'] 32432 15363 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 65.801 2 -1.9518151174037652 0.4525464466675328 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 28143 3238 FRDEMVNRIWQ True NCI_RA007_Epitope_Rep1 1492.7245174550799 1492.72288490379 16.49 3 -1.951834341278612 0.4525464466675328 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 63822 20125 LNIRTKGRTWY True NCI_RA007_Epitope_Rep5 1406.7782672801 1406.7766349037902 84.355 3 -1.9520224684648046 0.45257402695826343 1.0 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136'] 110854 10742 TGRGGGGA True PC9_epitope_Rep3 631.3037865632699 631.30323496793 46.272 1 -1.952263384349828 0.4525907801572007 1.0 ['ENST00000528220.1_1_11:65487749-65488268:-|nuORF', 'ENST00000308418.8_1_11:65487749-65488293:-|nuORF'] 270 22740 AAGLKKSH True NCI_RA007_Epitope_Rep4 810.47118624154 810.47008993586 98.72 2 -1.9527590218823438 0.4526075329933851 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 78018 23411 NVRFLTRQ True NCI_RA007_Epitope_Rep4 1032.5828619488398 1032.5817699358602 101.62 2 -1.9528366177339134 0.45261938529160217 1.0 ['EPHA3|p.P384T|1|0.28|ENSG00000044524|chr3:89341934-89341934|C/A|missense_variant'] 127611 24667 VPAAAAAH True H1975_Epitope_Rep2 706.3762232275401 706.3756749679301 101.44 1 -1.9528993349990396 0.45261938529160217 1.0 ['ENST00000358689.8_2_8:23290247-23290583:-|nuORF'] 120156 14766 VEAPGGQK True NCI_RA007_Epitope_Rep4 784.40791727864 784.4073649679301 64.256 1 -1.9530244436927187 0.4526361372740067 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 123924 14629 VGRTLAGHSKW True NCI_RA007_Epitope_Rep2 1210.6570895182597 1210.6559899358601 61.569 2 -1.9531517809155843 0.45264206298513604 1.0 ['ENSG00000073536|ENST00000442241|NLE1'] 27252 8097 FLPPAPAA True PC9_epitope_Rep4 782.4326754744999 782.43156993586 38.599 2 -1.953668922199174 0.4527198917456022 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 113456 10167 TLSRLEFLG True PC9_epitope_Rep5 1034.5760452328998 1034.57494993586 44.094 2 -1.9537635375309117 0.4527198917456022 1.0 ['SLC35F1|p.V247L|1|0.13|ENSG00000196376|chr6:118275560-118275560|G/T|missense_variant'] 93222 22342 RPRATRFK True PC9_epitope_Rep4 1030.6148307834599 1030.6137299358602 94.176 2 -1.9537940972741477 0.4527198917456022 1.0 ['ENST00000370544.9_1_1:87794674-87797922:+|nuORF'] 96679 22273 SAKKPCPV True PC9_epitope_Rep6 828.4527592960799 828.45166993586 98.643 2 -1.953848580220786 0.4527198917456022 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 129500 25776 VRKLISSS True PC9_epitope_Rep1 888.5392658013601 888.5387149679301 104.22 1 -1.9539666725630356 0.45273664155191823 1.0 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2'] 37746 3983 GWVFEMGD True PC9_epitope_Rep2 939.3796539254698 939.37854993586 20.582 2 -1.9540291972961767 0.45275339099559414 1.0 ['ENST00000536837.1_1_12:121837446-121837686:-|nuORF'] 55152 16459 LAAGRTRK True NCI_RA007_Epitope_Rep4 871.53518348043 871.53408993586 71.347 2 -1.9545501563254497 0.45278688879507245 1.0 ['ENSG00000162624|ENST00000356261|LHX8', 'nc|ENSG00000162624|Q68G74|LHX8'] 122444 14289 VGDYGSLS True PC9_epitope_Rep3 796.36029837988 796.35920993586 60.05 2 -1.954563617120997 0.45278688879507245 1.0 ['ENST00000488395.1_1_20:57572656-57581383:-|nuORF', 'ENSG00000101160|ENST00000217131|CTSZ'] 25780 20069 FEVLLNYV True H1975_Epitope_Rep3 995.53278343859 995.53168993586 83.988 2 -1.9552281505616353 0.45282038514413137 1.0 ['ENST00000357055.7_1_2:32446577-32446703:+|nuORF'] 34217 15548 GNKVTGTI True NCI_RA007_Epitope_Rep5 788.43921740692 788.43812993586 66.505 2 -1.9552347054506611 0.45282038514413137 1.0 ['ENSG00000081026|ENST00000307546|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-1|MAGI3'] 120790 12896 VELDTLAA True H1975_Epitope_Rep3 830.4385487005799 830.43744993586 54.829 2 -1.9553896300642204 0.45282732940768966 1.0 ['ENSG00000167325|ENST00000300738|RRM1'] 74587 6359 NGFISESSSI True NCI_RA007_Epitope_Rep3 1039.48220441771 1039.48110993586 32.015 2 -1.9554150301398905 0.45282732940768966 1.0 ['ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 370 5632 AAKTVLRP True NCI_RA007_Epitope_Rep3 854.5337864980999 854.53268993586 29.144 2 -1.9554416205931189 0.45282732940768966 1.0 ['nc|ENSG00000090615|Q08378-2|GOLGA3'] 127904 16555 VPGRRASL True NCI_RA007_Epitope_Rep5 854.50863437942 854.50808496793 70.438 1 -1.9559160482003477 0.45283325215132325 1.0 ['nc|ENSG00000092871|Q8WZ73-3|RFFL', 'nc|ENSG00000092871|Q8WZ73-2|RFFL', 'ENSG00000092871|ENST00000394597|RFFL'] 69701 6898 LVEELEPPS True NCI_RA007_Epitope_Rep2 1011.5124419168299 1011.51134993586 31.45 2 -1.956224286801149 0.4528608230684303 1.0 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2', 'nc|ENSG00000114859|P51788-5|CLCN2', 'nc|ENSG00000114859|P51788-2|CLCN2', 'ENST00000485667.1_1_3:184073137-184079267:-|nuORF'] 58597 12576 LEQRILQVL True H1975_Epitope_Rep1 1110.67609362734 1110.6749899358601 53.42 2 -1.9563008632413417 0.45286674532131144 1.0 ['nc|ENSG00000124256|Q9H171-4|ZBP1', 'ENSG00000124256|ENST00000371173|ZBP1', 'nc|ENSG00000124256|Q9H171-5|ZBP1', 'ENST00000480037.1_1_20:56191111-56195351:-|nuORF', 'ENST00000432548.2_1_20:56190212-56195528:-|nuORF', 'ENST00000461547.5_1_20:56191111-56191654:-|nuORF', 'nc|ENSG00000124256|Q9H171-6|ZBP1', 'nc|ENSG00000124256|Q9H171-3|ZBP1', 'nc|ENSG00000124256|Q9H171-2|ZBP1'] 10861 19885 CVNGKKKVL True NCI_RA007_Epitope_Rep5 987.5899214752299 987.58882993586 83.401 2 -1.9563287307317399 0.45287266744598864 1.0 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-2|RIOX2'] 48594 28299 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 119.7 3 -1.9563637323440315 0.4528785894424661 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 32604 20433 GGHGRGAR True PC9_epitope_Rep4 766.3946672563399 766.39356993586 86.744 2 -1.9564621745912611 0.4529061586751813 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 53734 21260 KSPGKAAS True PC9_epitope_Rep3 744.41300265908 744.4124549679301 87.07 1 -1.9564666830617166 0.45291208018097 1.0 ['nc|ENSG00000127483|Q5SSJ5-3|HP1BP3', 'nc|ENSG00000127483|Q5SSJ5-2|HP1BP3', 'ENSG00000127483|ENST00000438032|HP1BP3', 'HP1BP3|p.Q474H|1|0.15|ENSG00000127483|chr1:20745037-20745037|C/A|missense_variant'] 133062 24287 VVPQLKYKV True PC9_epitope_Rep6 1072.6644663144798 1072.6633699358601 107.29 2 -1.956654833147268 0.452920039828564 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 91252 15880 RGGPVRVA True NCI_RA007_Epitope_Rep3 810.4824196315799 810.48132993586 70.119 2 -1.956669992815148 0.452920039828564 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 30370 8402 GADKIQMTWTR True PC9_epitope_Rep5 1305.64995553249 1305.64831490379 37.261 3 -1.9567774155116384 0.452920039828564 1.0 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4'] 86202 21388 QIHIKPGA True NCI_RA007_Epitope_Rep4 862.5024863698198 862.50138993586 92.715 2 -1.95684198418418 0.452920039828564 1.0 ['ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF'] 135669 24914 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 104.75 3 -1.9568688746649212 0.452920039828564 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 12294 5052 DINDNAPQVL True NCI_RA007_Epitope_Rep1 1097.53530261973 1097.5342099358602 23.735 2 -1.957020801863429 0.4529367836618072 1.0 ['CDH2|p.D834Tfs*23|1|0.3|ENSG00000170558|chr18:27963371-27963371|C/-|frameshift_variant', 'ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 60465 6724 LGWLQEHAC True PC9_epitope_Rep3 1055.48585032951 1055.48474993586 30.885 2 -1.957541417978241 0.45296555604852234 1.0 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000508667.5_1_5:145522961-145531505:-|nuORF'] 95205 17791 RVKHLMLLHY True NCI_RA007_Epitope_Rep5 1308.74888172812 1308.74778993586 75.22 2 -1.9575890839128136 0.45296555604852234 1.0 ['ENSG00000196329|ENST00000358647|GIMAP5', 'nc|ENSG00000196329|Q96F15-2|GIMAP5'] 30457 6255 GAFQDSALSP True PC9_epitope_Rep5 991.4610750503099 991.45996993586 29.037 2 -1.9576589894596321 0.45296555604852234 1.0 ['nc|ENSG00000178226|Q5K4E3-2|PRSS36', 'PRSS36|p.G748Wfs*16|1|0.2|ENSG00000178226|chr16:31140342-31140343|-/G|frameshift_variant', 'nc|ENSG00000178226|Q5K4E3-3|PRSS36', 'ENSG00000178226|ENST00000268281|PRSS36'] 20185 9312 ENGTRVITEV True H1975_Epitope_Rep2 1116.57750178488 1116.57640993586 40.779 2 -1.9577741337428654 0.45296555604852234 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 394 16531 AALDPLDLR True PC9_epitope_Rep1 982.54474510462 982.54364993586 68.41 2 -1.957870188837916 0.45296555604852234 1.0 ['ENSG00000036448|ENST00000262113|MYOM2', 'MYOM2|p.F736Ifs*16|1|0.15|ENSG00000036448|chr8:2096323-2096324|-/A|frameshift_variant'] 79801 15399 PEEQLPKT True PC9_epitope_Rep3 940.48656152216 940.48601496793 64.388 1 -1.9579409465459847 0.45296555604852234 1.0 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 73828 19277 NALERVPSGLP True PC9_epitope_Rep4 1151.6298717109098 1151.6287699358602 82.254 2 -1.9580475016519914 0.45296555604852234 1.0 ['ENSG00000174348|ENST00000312553|PODN', 'nc|ENSG00000174348|Q7Z5L7-2|PODN', 'nc|ENSG00000174348|Q7Z5L7-3|PODN', 'nc|ENSG00000174348|Q7Z5L7-4|PODN'] 79798 15119 PEEQLPKT True PC9_epitope_Rep1 940.48656152216 940.48601496793 62.974 1 -1.958101739344059 0.45296555604852234 1.0 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 54066 23216 KVIPKNRIHH True PC9_epitope_Rep6 1240.75165860944 1240.75056993586 102.4 2 -1.9581055013714244 0.45296555604852234 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 81354 6574 PLCPDVSFFPQ True PC9_epitope_Rep3 1248.58489566444 1248.58378993586 30.311 2 -1.9581258430760726 0.45296555604852234 1.0 ['ENST00000467837.5_1_1:160313501-160313621:+|nuORF'] 45658 15344 IREQWWRWNRW True NCI_RA007_Epitope_Rep1 1714.8593115654596 1714.85820993586 63.762 2 -1.9583170213920613 0.45296555604852234 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 90880 4981 REVQDPAP True H1975_Epitope_Rep2 910.4508447197799 910.44974993586 24.242 2 -1.9584531044261762 0.45296555604852234 1.0 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 12764 8099 DLELFICEL True H1975_Epitope_Rep2 1093.53654848969 1093.53544993586 36.102 2 -1.958515151793959 0.45296555604852234 1.0 ['chr8:123194148-123202384|366|13.69|0.72|4.25|+|2|TE_info:L2b,L2b_dup46378,L2,LINE,acceptor,+,123202384,123202636|FAM83A,None|1'] 46090 16098 ISHHIPATAPP True PC9_epitope_Rep1 1139.60874234351 1139.60710490379 66.737 3 -1.958638175943177 0.45296555604852234 1.0 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 44200 22435 IKAPAVAFWR True PC9_epitope_Rep4 1157.67094867725 1157.6698499358602 94.529 2 -1.9593084023220573 0.4530039388823962 1.0 ['ENST00000479887.1_1_7:143949295-143949613:-|nuORF'] 96674 23898 SAKKPCPV True PC9_epitope_Rep3 828.4527592960799 828.45166993586 97.21 2 -1.9596310421439929 0.4530049559590538 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 56498 4610 LDFEMALANI True PC9_epitope_Rep4 1135.55834656343 1135.55671490379 24.243 3 -1.9596967080664334 0.4530049559590538 1.0 ['ECE1|p.T312M|1|0.19|ENSG00000117298|chr1:21256032-21256032|G/A|missense_variant'] 122155 23464 VGAGKRKRRHS True PC9_epitope_Rep1 1250.7432191840599 1250.74267496793 95.04 1 -1.9600463664413088 0.45301679362880887 1.0 ['ENSG00000145220|ENST00000343470|LYAR'] 87083 20884 QNLPLLLLDLT True NCI_RA007_Epitope_Rep5 1251.74383883399 1251.74274993586 87.326 2 -1.960083964988487 0.45301679362880887 1.0 ['ENSG00000198786|ENST00000361567|MT-ND5'] 135670 25070 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 105.53 3 -1.9601888563593088 0.4530227122715518 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 22561 8333 ETKESLDNRNW True H1975_Epitope_Rep1 1390.6477066030197 1390.6466099358602 36.984 2 -1.9602492727137864 0.4530286307862105 1.0 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant', 'nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 48468 10547 KACGNGGP True NCI_RA007_Epitope_Rep2 702.31190871882 702.31135496793 45.623 1 -1.9603210300176594 0.4530345491727891 1.0 ['ENST00000590000.1_1_19:5591781-5592884:-|nuORF'] 25837 17649 FFFFFFFLPFW True NCI_RA007_Epitope_Rep1 1590.7740167634597 1590.77290993586 72.786 2 -1.9604658850228418 0.45305128760008656 1.0 ['ENST00000597450.1_1_2:136757602-136764807:+|nuORF'] 62539 20582 LLKERLEKFFH True H1975_Epitope_Rep3 1458.8347195270599 1458.83362993586 86.021 2 -1.9607542284488937 0.4530533194841167 1.0 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1', 'ENST00000490178.1_1_7:6854391-6861977:-|nuORF'] 15522 13137 EANQKKLV True PC9_epitope_Rep2 928.5341804209199 928.53308993586 55.805 2 -1.9608382362719459 0.4530533194841167 1.0 ['ENSG00000003756|ENST00000347869|RBM5'] 85499 15951 QFSLTEPMK True NCI_RA007_Epitope_Rep4 1079.53213181559 1079.53102993586 69.226 2 -1.9608676282171509 0.4530533194841167 1.0 ['nc|ENSG00000269307|Q9NWV8-3|BABAM1', 'ENST00000595393.5_1_19:17378325-17387472:+|nuORF', 'nc|ENSG00000269307|Q9NWV8-2|BABAM1', 'ENST00000594247.5_1_19:17379766-17388064:+|nuORF', 'ENSG00000105393|ENST00000598188|BABAM1'] 131903 15197 VTRPHSGP True NCI_RA007_Epitope_Rep1 849.44569976969 849.4451549679301 63.184 1 -1.961119254540151 0.4530533194841167 1.0 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 88015 15569 QRPPSNGG True NCI_RA007_Epitope_Rep3 811.39366419683 811.39311496793 68.806 1 -1.9612738620682568 0.45305433536018 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 15773 8893 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 39.111 2 -1.9613075546591456 0.45305433536018 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 122326 7631 VGCSGHSL True NCI_RA007_Epitope_Rep4 758.33812346666 758.3375749679301 36.005 1 -1.9614870372371769 0.4530927110043602 1.0 ['ENST00000396504.6_1_22:41923400-41923763:-|nuORF'] 87348 9307 QPSLPEAK True PC9_epitope_Rep5 868.4654321547599 868.46432993586 40.752 2 -1.9618377093682986 0.4530986281213485 1.0 ['ENST00000407418.7_1_22:39260685-39261309:-|nuORF'] 48617 28558 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 119.63 3 -1.9622031533527033 0.4530996429730607 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 70565 15771 LWDKLDHYYRI True NCI_RA007_Epitope_Rep2 1520.77759857376 1520.77650993586 66.063 2 -1.962217402499061 0.4530996429730607 1.0 ['PHKB|p.A639Qfs*7|1|0.4|ENSG00000102893|chr16:47650864-47650864|G/-|frameshift_variant', 'nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 3539 16626 AGLRKSPF True PC9_epitope_Rep3 874.5024863698198 874.50138993586 69.088 2 -1.9623384836896043 0.4531055598230031 1.0 ['ENST00000347970.7_1_15:102182621-102182681:-|nuORF'] 38943 12846 HHHTTQHT True H1975_Epitope_Rep3 997.4478250280102 997.44672993586 54.634 2 -1.9623925886628526 0.45310657449179403 1.0 ['ENST00000447654.5_1_6:34212664-34212856:+|nuORF'] 52574 23696 KLHSQLRTTVL True PC9_epitope_Rep2 1294.7721192705 1294.77046490379 96.619 3 -1.9623981552565792 0.45310657449179403 1.0 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 48595 981 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 5.3318 3 -1.962493408383532 0.45312330960469094 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 8602 18269 ATWTLLREV True PC9_epitope_Rep4 1087.6025943339098 1087.6014899358602 78.343 2 -1.9625320143019047 0.4531285490238494 1.0 ['ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 24937 22676 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 94.412 2 -1.9625551529875764 0.4531285490238494 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 119978 7083 VDPSFLAA True NCI_RA007_Epitope_Rep3 818.4174193331799 818.41632993586 34.978 2 -1.9626506438535063 0.4531285490238494 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'HUWE1|p.P2977H|1|0.17|ENSG00000086758|chrX:53551432-53551432|G/T|missense_variant'] 23486 2887 EVVDLGGL True NCI_RA007_Epitope_Rep1 800.4279840168799 800.42688993586 15.053 2 -1.962758612925474 0.4531285490238494 1.0 ['nc|ENSG00000105676|Q6NXE6-2|ARMC6', 'ENSG00000105676|ENST00000535612|ARMC6'] 36279 9214 GVDWAAQEELE True PC9_epitope_Rep2 1245.5513466066898 1245.5502499358602 40.781 2 -1.9629239076944665 0.4531285490238494 1.0 ['VIT|p.A644D|1|0.18|ENSG00000205221|chr2:36814255-36814255|C/A|missense_variant'] 79771 13652 PEDCGQPGS True NCI_RA007_Epitope_Rep4 888.3283466286 888.32724993586 59.732 2 -1.963035755942896 0.4531285490238494 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 45360 15624 IQDLLELSPPE True PC9_epitope_Rep2 1252.6550833992399 1252.6539899358602 65.374 2 -1.963209524148393 0.4531285490238494 1.0 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 101259 10295 SLHYQFYVWYF True H1975_Epitope_Rep1 1551.7186867153098 1551.7175899358601 44.545 2 -1.9633171893493881 0.4531285490238494 1.0 ['ENST00000485912.1_1_3:183960304-183960812:-|nuORF', 'nc|ENSG00000214160|Q92685-2|ALG3', 'ENSG00000214160|ENST00000397676|ALG3'] 122902 6435 VGHPGKRH True PC9_epitope_Rep5 886.48856764118 886.4880149679301 29.726 1 -1.963385551539345 0.4531285490238494 1.0 ['nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'ENSG00000160111|ENST00000443236|CPAMD8'] 123499 10157 VGPGPCPI True H1975_Epitope_Rep3 738.37344634622 738.37289496793 44.111 1 -1.963414104539281 0.4531285490238494 1.0 ['ENST00000434284.1_1_X:153001256-153003714:-|nuORF'] 32275 20431 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 85.525 2 -1.9635682703897197 0.4531285490238494 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 68777 17848 LTLKPPLR True PC9_epitope_Rep1 936.6120368187999 936.61092993586 73.447 2 -1.9635801515702118 0.4531285490238494 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 93811 24577 RRAQRPTA True PC9_epitope_Rep4 954.5471451464598 954.54604993586 103.02 2 -1.9635887977782898 0.4531285490238494 1.0 ['ENST00000475470.1_1_3:9882101-9883869:-|nuORF', 'ENST00000464783.1_1_3:9882380-9882515:-|nuORF', 'ENST00000472381.5_1_3:9882380-9885335:-|nuORF', 'nc|ENSG00000156990|Q6P087-6|RPUSD3', 'nc|ENSG00000156990|Q6P087-2|RPUSD3', 'ENSG00000156990|ENST00000383820|RPUSD3', 'nc|ENSG00000156990|Q6P087|RPUSD3'] 139040 21191 YLALLGEW True PC9_epitope_Rep3 963.50656869075 963.5060249679301 86.799 1 -1.9636447982034952 0.4531285490238494 1.0 ['SLIT2|p.W674L|1|0.15|ENSG00000145147|chr4:20541497-20541497|G/T|missense_variant'] 123113 19256 VGKLGLNCAIY True NCI_RA007_Epitope_Rep5 1149.6216155263298 1149.6199649037899 80.934 3 -1.9636687340904002 0.4531285490238494 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 8470 14636 ATQRLLFQQL True PC9_epitope_Rep5 1216.6928063206399 1216.6917099358602 61.298 2 -1.9639207131055403 0.4531285490238494 1.0 ['nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'ENSG00000140534|ENST00000268138|TICRR'] 3315 19585 AGGGHPNK True PC9_epitope_Rep2 736.36163579256 736.3610849679301 80.715 1 -1.9640367634217266 0.4531285490238494 1.0 ['ENST00000490362.1_1_2:217498183-217525611:+|nuORF'] 111935 20707 TIPVDSKTF True PC9_epitope_Rep3 1006.53351171458 1006.53240993586 84.925 2 -1.9640432722906995 0.4531285490238494 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'MUC17|p.N4447Kfs*5|1|0.28|ENSG00000169876|chr7:101053409-101053410|-/A|frameshift_variant', 'ENSG00000169876|ENST00000306151|MUC17', 'MUC17|p.D931Efs*6|1|0.21|ENSG00000169876|chr7:101034209-101034209|C/-|frameshift_variant'] 57519 4130 LEDNKWAFNCD True H1975_Epitope_Rep3 1353.5659511250099 1353.56431490379 21.009 3 -1.9640970292416333 0.4531285490238494 1.0 ['SLITRK6|p.C222F|1|0.41|ENSG00000184564|chr13:85795844-85795844|C/A|missense_variant'] 53195 6439 KQEENIDPMFN True NCI_RA007_Epitope_Rep1 1363.6078159369897 1363.6067099358602 29.067 2 -1.9642137979378518 0.4531285490238494 1.0 ['ENST00000532458.1_1_14:95582860-95590585:-|nuORF'] 135754 23598 WLYNRLLHKF True PC9_epitope_Rep4 1388.7717253476796 1388.77006490379 99.076 3 -1.964223192602222 0.4531285490238494 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 35084 25473 GQVLVLELND True PC9_epitope_Rep2 1098.59208921986 1098.59098993586 103.66 2 -1.96443758386154 0.45313446396123563 1.0 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF'] 21782 12642 ERWEQRQQWRR True NCI_RA007_Epitope_Rep1 1656.8345533696 1656.83344993586 53.155 2 -1.9645748000307832 0.45314240598738925 1.0 ['ENSG00000136378|ENST00000388820|ADAMTS7', 'ENST00000566303.5_1_15:79059386-79103601:-|nuORF', 'ENST00000565793.5_1_15:79069566-79092863:-|nuORF', 'ENST00000568712.1_1_15:79063704-79103562:-|nuORF', 'ADAMTS7|p.G783Vfs*174|1|0.57|ENSG00000136378|chr15:78771613-78771613|C/-|frameshift_variant'] 117829 6335 TVYDRGICPM True NCI_RA007_Epitope_Rep3 1153.52600088933 1153.52490993586 31.923 2 -1.9645818957186003 0.45314240598738925 1.0 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3'] 139553 23368 YLTSGLKVY True H1975_Epitope_Rep1 1042.5698972233 1042.5688099358601 97.126 2 -1.9645966354672364 0.45314240598738925 1.0 ['ENSG00000165195|ENST00000333590|PIGA', 'PIGA|p.H154Ifs*9|1|0.07|ENSG00000165195|chrX:15331471-15331472|-/AAAT|frameshift_variant', 'nc|ENSG00000165195|P37287-2|PIGA'] 135247 23739 WFLNRKIIIH True PC9_epitope_Rep1 1338.79246079226 1338.79081490379 96.105 3 -1.9646071391391005 0.45314240598738925 1.0 ['ENST00000311806.7_1_3:38295131-38295401:+|nuORF'] 116779 14630 TVDSM[Oxidation]IPEVIK True NCI_RA007_Epitope_Rep1 1246.64789022426 1246.6473749679299 60.958 1 -1.9646371701025849 0.45314240598738925 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 86788 7693 QLMEDHDIDV True PC9_epitope_Rep2 1213.52850298713 1213.52740993586 34.962 2 -1.9646500432876375 0.45314341952997417 1.0 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 84468 7742 QAILTPRTP True PC9_epitope_Rep4 995.57637958607 995.57528993586 37.169 2 -1.9646612864934316 0.45314341952997417 1.0 ['ENST00000511482.1_1_5:306832-313953:+|nuORF'] 58625 10309 LEQYKIDNK True PC9_epitope_Rep3 1149.6029882567298 1149.60188993586 44.599 2 -1.9648336969713893 0.4531562611526274 1.0 ['nc|ENSG00000197980|Q6ZMV7|LEKR1', 'ENST00000470811.5_1_3:156544101-156697065:+|nuORF', 'ENSG00000197980|ENST00000356539|LEKR1'] 62538 20704 LLKERLEKFFH True H1975_Epitope_Rep1 1458.8347195270599 1458.83362993586 86.057 2 -1.9648867497826854 0.4531562611526274 1.0 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1', 'ENST00000490178.1_1_7:6854391-6861977:-|nuORF'] 103007 22270 SPFLDSHS True PC9_epitope_Rep6 888.3977465177602 888.39664993586 98.632 2 -1.964973159197078 0.4531562611526274 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5'] 84614 6687 QDDGGSPI True NCI_RA007_Epitope_Rep2 787.33481190803 787.33426496793 30.624 1 -1.9649765053760853 0.4531562611526274 1.0 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-4|NCAM1', 'nc|ENSG00000149294|P13591-1|NCAM1', 'ENSG00000149294|ENST00000316851|NCAM1', 'ENST00000525355.5_1_11:113105759-113131080:+|nuORF'] 3751 20832 AGSQTRDV True PC9_epitope_Rep6 832.4038945273599 832.40334496793 92.903 1 -1.9655083472935995 0.45316420105545463 1.0 ['ENSG00000174521|ENST00000311308|TTC9B'] 129096 20129 VQPVIDKL True PC9_epitope_Rep3 910.5487678558999 910.54766993586 82.679 2 -1.9655146758651232 0.45316420105545463 1.0 ['ENST00000538548.5_1_12:132198725-132271134:+|nuORF', 'ENSG00000061936|ENST00000261674|SFSWAP', 'nc|ENSG00000061936|Q12872-2|SFSWAP'] 13455 27198 DNDPVFTQ True PC9_epitope_Rep5 934.40322582102 934.40212993586 111.41 2 -1.965717294771684 0.45316420105545463 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'CELSR1|p.N814Kfs*3|1|0.08|ENSG00000075275|chr22:46534729-46534730|-/C|frameshift_variant'] 61467 22980 LKAGGKST True H1975_Epitope_Rep1 760.44430278736 760.44320993586 95.558 2 -1.9657450355013621 0.45316420105545463 1.0 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1'] 12866 6467 DLHPNTDPFK True H1975_Epitope_Rep2 1182.5669371011797 1182.5658499358601 29.792 2 -1.965790387623304 0.45316420105545463 1.0 ['nc|ENSG00000140945|P55290-5|CDH13', 'ENSG00000140945|ENST00000567109|CDH13', 'nc|ENSG00000140945|P55290-4|CDH13'] 61384 14341 LITKFLQYESK True NCI_RA007_Epitope_Rep3 1368.7653025545599 1368.76366490379 63.725 3 -1.9659542219955881 0.4531701145199139 1.0 ['ENST00000548422.1_1_12:96676203-96677401:-|nuORF', 'nc|ENSG00000059758|Q00537-2|CDK17', 'ENSG00000059758|ENST00000261211|CDK17'] 83107 7932 PSPQFYSSLIE True PC9_epitope_Rep1 1266.61321858726 1266.6121299358601 35.334 2 -1.9660746312918436 0.45317416550426576 1.0 ['FANCL|p.P107S|1|0.37|ENSG00000115392|chr2:58221997-58221997|G/A|missense_variant'] 90760 19855 RERRKSLFK True NCI_RA007_Epitope_Rep4 1218.7309231648599 1218.7292849037901 85.819 3 -1.9661045079394157 0.45317416550426576 1.0 ['ENSG00000099308|ENST00000687212|MAST3'] 69238 22459 LTSTMLLKV True PC9_epitope_Rep3 1004.5940037961599 1004.59290993586 91.666 2 -1.9661961015578655 0.45317416550426576 1.0 ['ENST00000562867.5_1_16:28837684-28837723:+|nuORF'] 44236 25533 IKLLCLFFL True PC9_epitope_Rep3 1108.67186019404 1108.67127496793 103.69 1 -1.96646312921713 0.45317416550426576 1.0 ['ITGB6|p.E4K|1|0.12|ENSG00000115221|chr2:160200054-160200054|C/T|missense_variant'] 79803 13429 PEEQLPKT True PC9_epitope_Rep6 940.48656152216 940.48601496793 63.339 1 -1.966735039322122 0.45317416550426576 1.0 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 127271 23011 VLYVDPMIT True PC9_epitope_Rep5 1049.5467192505698 1049.54617496793 93.502 1 -1.9667356106070657 0.45317416550426576 1.0 ['nc|ENSG00000162594|Q5VWK5-5|IL23R', 'nc|ENSG00000162594|Q5VWK5-6|IL23R', 'nc|ENSG00000162594|Q5VWK5-2|IL23R', 'IL23R|p.T505Nfs*6|1|0.35|ENSG00000162594|chr1:67258750-67258751|-/A|frameshift_variant', 'ENSG00000162594|ENST00000347310|IL23R', 'nc|ENSG00000162594|Q5VWK5-7|IL23R'] 32506 21175 GGEQPPPGAK True NCI_RA007_Epitope_Rep5 936.4664947839199 936.46538993586 88.481 2 -1.9667623880221843 0.45317416550426576 1.0 ['ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000498638.1_1_7:99753991-99754759:-|nuORF'] 123235 23696 VGLGHPPT True NCI_RA007_Epitope_Rep5 776.4180880395201 776.41753496793 98.484 1 -1.9668003223522974 0.45317416550426576 1.0 ['ENST00000325327.3_1_19:2429436-2429694:-|nuORF'] 119064 12679 VAGGSKHG True H1975_Epitope_Rep1 711.36638681983 711.36583496793 53.825 1 -1.9670333453251074 0.4531949399935128 1.0 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF', 'MSI2-NPEPPS|1|fusion', 'MSI2-NPEPPS|2|fusion'] 31733 12091 GEGSHSSR True H1975_Epitope_Rep2 815.3521933076701 815.35108993586 51.59 2 -1.9670906490152804 0.4531949399935128 1.0 ['ZBTB4|p.G750E|1|0.47|ENSG00000174282|chr17:7462733-7462733|C/T|missense_variant'] 79782 11827 PEDPRLSFP True PC9_epitope_Rep6 1056.52400966004 1056.52290993586 56.698 2 -1.9670997424411925 0.4531949399935128 1.0 ['ENSG00000133884|ENST00000528416|DPF2', 'ENST00000444314.6_1_11:65101357-65109054:+|nuORF', 'nc|ENSG00000133884|Q92785-2|DPF2', 'DPF2|p.K258Nfs*55|1|0.25|ENSG00000133884|chr11:65345800-65345800|A/-|frameshift_variant', 'ENST00000524666.5_1_11:65108438-65113200:+|nuORF'] 129154 21271 VQRNVSKL True PC9_epitope_Rep6 942.5610638750999 942.55996993586 94.672 2 -1.9672371073126311 0.4531949399935128 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 37350 10478 GVSGMATT True NCI_RA007_Epitope_Rep5 722.3268900766201 722.32634496793 46.936 1 -1.9672808978996479 0.4531949399935128 1.0 ['ENSG00000130517|ENST00000269919|PGPEP1'] 121916 21855 VFRRDQRL True PC9_epitope_Rep5 1088.6203100867199 1088.61920993586 89.102 2 -1.9674358565752683 0.4531949399935128 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 85533 8787 QGAVGPEV True NCI_RA007_Epitope_Rep3 755.38136817763 755.3808149679301 41.652 1 -1.9677495287644131 0.4531949399935128 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 65454 732 LRKAALKQPF True PC9_epitope_Rep3 1170.7237125260997 1170.7220549037902 4.0602 3 -1.9677710416600172 0.4531949399935128 1.0 ['ENST00000222120.7_1_19:11435272-11435518:-|nuORF'] 74435 10593 NETQRQKSH True H1975_Epitope_Rep2 1126.5479329921 1126.5468299358602 45.768 2 -1.9678459131836776 0.4531949399935128 1.0 ['nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'ENSG00000124151|ENST00000371998|NCOA3', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 135238 5754 WFHPTWAQ True PC9_epitope_Rep3 1071.49264996211 1071.4915499358601 27.204 2 -1.9680325867051003 0.45320388769365494 1.0 ['ENSG00000082213|ENST00000325366|C5orf22', 'ENST00000511208.2_1_5:31534421-31538621:+|nuORF'] 82439 10853 PPPMPLPP True NCI_RA007_Epitope_Rep5 844.4516966669199 844.45058993586 48.381 2 -1.9683430186420456 0.45320388769365494 1.0 ['ENST00000461735.1_2_7:150773431-150773557:+|nuORF'] 60356 14986 LGSSPLVPAP True PC9_epitope_Rep6 936.5280324113199 936.52692993586 69.657 2 -1.9684804532076026 0.45320388769365494 1.0 ['ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA'] 3380 9184 AGHLPSSSP True PC9_epitope_Rep3 851.4137309350701 851.41262993586 40.265 2 -1.9685250559357712 0.45320388769365494 1.0 ['ENST00000395648.7_2_11:44955194-44955650:-|nuORF'] 18115 8043 EIIHTGQKPY True PC9_epitope_Rep6 1184.61897267404 1184.6178699358602 40.424 2 -1.9687136320947127 0.45320388769365494 1.0 ['ZNF99|p.T497Lfs*5|1|0.05|ENSG00000213973|chr19:22758423-22758423|G/-|frameshift_variant', 'ENSG00000213973|ENST00000596209|ZNF99'] 53526 23897 KRLLQLPQW True PC9_epitope_Rep2 1180.7080624619598 1180.7069699358601 97.399 2 -1.9687501741256765 0.45320388769365494 1.0 ['ENSG00000153976|ENST00000284110|HS3ST3A1', 'HS3ST3A1|p.E356Gfs*19|1|0.32|ENSG00000153976|chr17:13496353-13496354|-/T|frameshift_variant'] 63934 7272 LNRYIHRER True PC9_epitope_Rep5 1255.6897866288698 1255.68814490379 32.936 3 -1.968753263009995 0.45320388769365494 1.0 ['ENST00000497493.1_1_21:38596799-38596853:-|nuORF'] 99181 22051 SHKIRAGG True PC9_epitope_Rep3 824.4616841869998 824.46058993586 90.116 2 -1.969175381315507 0.4532432432432432 1.0 ['ENSG00000171873|ENST00000379453|ADRA1D', 'ADRA1D|p.R528H|1|0.21|ENSG00000171873|chr20:4221659-4221659|C/T|missense_variant'] 117623 6683 TVTGARVM True PC9_epitope_Rep4 833.4429228883699 833.44182993586 32.888 2 -1.9692259891182216 0.4532432432432432 1.0 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'ENST00000366131.6_1_12:6462937-6464599:-|nuORF'] 95393 22422 RWECSHRLC True H1975_Epitope_Rep3 1188.5280665779999 1188.52642490379 93.727 3 -1.9693501394870216 0.4532432432432432 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant', 'MUC5B|p.P1935Lfs*5|1|0.25|ENSG00000117983|chr11:1242680-1242680|C/-|frameshift_variant', 'ENST00000525715.5_1_11:1244314-1260349:+|nuORF'] 11059 12022 DAVLQAVIQR True PC9_epitope_Rep4 1111.6349570913499 1111.63386993586 54.043 2 -1.9694808570072122 0.45325506475535665 1.0 ['RNF41|p.K230Q|1|0.16|ENSG00000181852|chr12:56206713-56206713|T/G|missense_variant'] 48598 24952 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 102.55 3 -1.9695786839773257 0.45325506475535665 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 91253 22162 RGGPVRVA True PC9_epitope_Rep1 810.4824196315799 810.48132993586 90.063 2 -1.9696269941456628 0.4532668857562916 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 28373 22755 FRVLRPFP True PC9_epitope_Rep2 1030.6076201446997 1030.6065299358602 93.02 2 -1.9696371077364494 0.4532668857562916 1.0 ['ENST00000389851.8_2_4:1341111-1341444:+|nuORF'] 27711 23383 FPPGLLHS True H1975_Epitope_Rep1 866.4650382319401 866.46394993586 97.184 2 -1.9697747278946844 0.4532727960650776 1.0 ['ENSG00000164841|ENST00000297459|TMEM74'] 123872 21021 VGRRAAKA True PC9_epitope_Rep4 827.5089687325898 827.5084249679301 89.019 1 -1.9698187026537108 0.4532738063065498 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 86655 5313 QLHAWWYF True PC9_epitope_Rep4 1149.5396001545298 1149.53850993586 27.149 2 -1.9700317275000379 0.4532738063065498 1.0 ['ENSG00000204007|ENST00000371763|GLT6D1'] 22140 8698 ESRRRHSSM True H1975_Epitope_Rep1 1144.55197282672 1144.5508699358602 38.387 2 -1.9701789939485441 0.4532748165043401 1.0 ['ENST00000556508.5_1_14:105344279-105346651:+|nuORF'] 72740 20320 MNKKSRSS True PC9_epitope_Rep6 936.48109930224 936.48000993586 90.866 2 -1.9701815640957843 0.4532748165043401 1.0 ['FRG2C|p.L123M|1|0.14|ENSG00000172969|chr3:75665559-75665559|T/A|missense_variant'] 55214 5917 LADDHLIEV True H1975_Epitope_Rep3 1023.52367530687 1023.5225699358599 27.768 2 -1.9703831996579553 0.4533190647598664 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 28652 8213 FSLVAPGLP True H1975_Epitope_Rep1 899.5116540711898 899.51054993586 36.533 2 -1.970416917912987 0.4533190647598664 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant'] 94656 21797 RRWQITGECL True PC9_epitope_Rep6 1260.6397252019597 1260.63808490379 96.735 3 -1.9706003065532234 0.45332497405741956 1.0 ['ENSG00000137055|ENST00000397292|PLAA'] 107619 2740 SVPPHEADN True H1975_Epitope_Rep2 964.42502389476 964.42392993586 14.59 2 -1.9708032810290965 0.4533416925188892 1.0 ['nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27', 'nc|ENSG00000143376|Q96L92-2|SNX27', 'ENST00000368841.6_1_1:151584666-151666074:+|nuORF'] 132549 11474 VVDTVLAL True NCI_RA007_Epitope_Rep3 828.4956696538799 828.49456993586 52.251 2 -1.9708473731177807 0.4533427011835918 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 63186 22058 LLRSKRHR True PC9_epitope_Rep4 1064.6679289854799 1064.66682993586 93.068 2 -1.9708674833849038 0.4533427011835918 1.0 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1'] 19848 13382 ELSWRPAI True PC9_epitope_Rep5 970.5236157372199 970.52250993586 56.491 2 -1.9710987643981943 0.45337022785247955 1.0 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF'] 48894 18954 KEDFYLNTGPI True NCI_RA007_Epitope_Rep5 1295.6397676882698 1295.63812490379 79.743 3 -1.9713113612459547 0.4533820445751097 1.0 ['ARAP2|p.P1501Qfs*6|1|1.0|ENSG00000047365|chr4:36083374-36083374|G/-|frameshift_variant', 'ENSG00000047365|ENST00000303965|ARAP2'] 118795 22004 VAAEKAIK True PC9_epitope_Rep4 828.5069030439199 828.50580993586 92.859 2 -1.9713848129561202 0.4533820445751097 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107564398-107569844:-|nuORF'] 135941 4599 WPWRNTSEM True PC9_epitope_Rep2 1205.52877777065 1205.52768993586 23.059 2 -1.9715144343525357 0.4534095699261773 1.0 ['ENST00000316637.6_1_6:35277486-35278290:+|nuORF'] 63152 16581 LLRMIILPLVV True H1975_Epitope_Rep2 1278.8461361579 1278.84448490379 69.005 3 -1.9716051760697821 0.4534154777345439 1.0 ['ENSG00000105281|ENST00000542575|SLC1A5'] 80392 20406 PGHSPVPH True NCI_RA007_Epitope_Rep5 826.4085859849802 826.40748993586 85.425 2 -1.9716889278207332 0.4534272929681589 1.0 ['ENST00000469140.2_1_14:105933129-105933369:+|nuORF'] 55808 18503 LAPARLHP True PC9_epitope_Rep4 873.5184707871299 873.51736993586 79.244 2 -1.9719101429284116 0.4534272929681589 1.0 ['ENST00000360578.6_1_5:662690-662924:-|nuORF'] 80645 6952 PGSPIFLM True NCI_RA007_Epitope_Rep2 860.44661128648 860.44606496793 31.661 1 -1.9721703421438568 0.45342829968440623 1.0 ['ACACB|p.R2183Dfs*8|1|0.32|ENSG00000076555|chr12:109260528-109260528|T/-|frameshift_variant', 'nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.S901Ffs*17|1|0.28|ENSG00000076555|chr12:109199474-109199475|-/T|frameshift_variant', 'ENST00000543080.1_1_12:109613818-109617755:+|nuORF'] 123398 8584 VGMSKASSC True NCI_RA007_Epitope_Rep4 868.37827402648 868.37716993586 39.802 2 -1.9721884875951707 0.45342829968440623 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 39350 23272 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 96.797 3 -1.9726015839440776 0.45346663064036746 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 81165 22778 PKGKKDRE True PC9_epitope_Rep2 956.5403284305199 956.53922993586 93.104 2 -1.9729578321668007 0.4534725374489333 1.0 ['nc|ENSG00000198363|Q12797-4|ASPH', 'nc|ENSG00000198363|Q12797-3|ASPH'] 128281 13953 VPPMAGGK True H1975_Epitope_Rep3 755.3999954472299 755.3994449679301 58.986 1 -1.972976162021856 0.4534784441298216 1.0 ['ENSG00000237649|ENST00000428849|KIFC1'] 82457 22688 PPPWLPPSFL True PC9_epitope_Rep2 1149.62226714933 1149.62062490379 92.764 3 -1.9731203518912164 0.45347944968604437 1.0 ['ENST00000464333.5_1_22:32012607-32014401:+|nuORF'] 123233 22683 VGLGHPPT True NCI_RA007_Epitope_Rep3 776.4180880395201 776.41753496793 98.615 1 -1.973156978580153 0.45347944968604437 1.0 ['ENST00000325327.3_1_19:2429436-2429694:-|nuORF'] 123125 9003 VGKMRAVA True NCI_RA007_Epitope_Rep4 830.4796427502598 830.47854993586 41.462 2 -1.973485286987674 0.45348736680571466 1.0 ['ENSG00000132671|ENST00000255008|SSTR4'] 17098 10211 EGLLSVAL True NCI_RA007_Epitope_Rep1 800.4643695256 800.46326993586 43.729 2 -1.9735916883583164 0.45348736680571466 1.0 ['ENSG00000127903|ENST00000537055|ZNF835', 'ZNF835|p.C224Rfs*23|1|0.29|ENSG00000127903|chr19:56664528-56664529|CA/-|frameshift_variant', 'ZNF835|p.E92Gfs*5|1|0.19|ENSG00000127903|chr19:56664926-56664927|-/T|frameshift_variant'] 135567 23424 WKVVRKGRRQ True PC9_epitope_Rep3 1311.8000057841898 1311.79837490379 95.377 3 -1.9737046707967936 0.45348736680571466 1.0 ['ENSG00000181007|ENST00000392161|ZFP82'] 116182 21774 TSVLHLRK True H1975_Epitope_Rep1 952.5817993196799 952.58070993586 90.49 2 -1.9737232880056907 0.45348736680571466 1.0 ['ENST00000253577.7_1_X:74284982-74285033:-|nuORF'] 69108 7286 LTRGPGAF True PC9_epitope_Rep2 817.4446371405298 817.44354993586 33.412 2 -1.9737827665150398 0.45348736680571466 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 136929 23331 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 97.029 2 -1.973928393799248 0.45349327281569135 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 38790 22013 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 90.997 2 -1.9739910867223438 0.4535099853030172 1.0 ['ACTL7B|p.G286Afs*74|1|0.34|ENSG00000148156|chr9:108855074-108855074|C/-|frameshift_variant', 'ENSG00000148156|ENST00000374667|ACTL7B'] 53381 19658 KQTLALTLRK True PC9_epitope_Rep3 1170.7448418934998 1170.74320490379 80.85 3 -1.9740804961130207 0.45351099007975104 1.0 ['ENST00000428765.1_1_22:42834211-42836504:+|nuORF'] 56462 9812 LDELSLFGP True NCI_RA007_Epitope_Rep1 989.5069626135698 989.50586993586 42.17 2 -1.9741369394931634 0.45351099007975104 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 135609 10757 WLIFYYIQRFL True NCI_RA007_Epitope_Rep5 1560.8493069620401 1560.84820993586 48.015 2 -1.9741674250270402 0.4535168955791612 1.0 ['ENSG00000163162|ENST00000295317|RNF149'] 122984 9180 VGIAKHIQ True PC9_epitope_Rep4 864.5181364339601 864.51702993586 42.905 2 -1.9742111570559973 0.4535268185157972 1.0 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 24936 22567 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 93.987 2 -1.974450759123322 0.4535268185157972 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 85682 11801 QGSQETLIPPR True H1975_Epitope_Rep3 1224.64625005104 1224.6451499358602 50.539 2 -1.974463881866159 0.4535268185157972 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S'] 22254 19627 ETAKVCTDTVS True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 82.403 3 -1.9748171295287007 0.4535268185157972 1.0 ['ENST00000590125.1_1_19:36032474-36033898:-|nuORF'] 136135 18340 WRQWNRIFRWK True PC9_epitope_Rep5 1674.90078245462 1674.89914490379 75.559 3 -1.9749301884572024 0.4535268185157972 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.L563Afs*24|1|0.17|ENSG00000081248|chr1:201077061-201077062|-/G|frameshift_variant'] 126899 13306 VLQPQRVL True PC9_epitope_Rep6 951.5865503469498 951.58544993586 62.837 2 -1.9750761782228923 0.4535268185157972 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 87606 25485 QQPLKQLT True PC9_epitope_Rep2 954.5498304850599 954.54872993586 103.71 2 -1.9751335099943805 0.4535268185157972 1.0 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA', 'MGA|p.H2273Rfs*60|1|0.26|ENSG00000174197|chr15:41750425-41750431|ACTTACT/-|frameshift_variant', 'MGA|p.A2391Qfs*13|1|0.36|ENSG00000174197|chr15:41757814-41757814|A/-|frameshift_variant', 'MGA|p.G1370Afs*26|1|0.34|ENSG00000174197|chr15:41736371-41736371|G/-|frameshift_variant', 'MGA|p.L1900Yfs*10|1|0.13|ENSG00000174197|chr15:41749300-41749301|-/TACA|frameshift_variant', 'MGA|p.T2133Sfs*24|1|0.22|ENSG00000174197|chr15:41750003-41750069|CACCTTTAAGGAAGAAAGTAAATTTGAATTGTCAGGAAGCAAAGTTATGGAGCAGCAATCTAATCTA/-|frameshift_variant'] 64543 15734 LPRRTAAA True NCI_RA007_Epitope_Rep3 854.5086343794198 854.50808496793 69.528 1 -1.9751805884860731 0.4535268185157972 1.0 ['ENST00000593841.1_2_19:51870593-51871198:-|nuORF'] 53201 9464 KQEIKRLSTEH True NCI_RA007_Epitope_Rep1 1367.75211210191 1367.75100993586 40.806 2 -1.9751998644659192 0.4535268185157972 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8'] 76272 27373 NPKQFMTM True PC9_epitope_Rep5 995.4568587003499 995.45576993586 112.22 2 -1.975671774042224 0.45353963177456996 1.0 ['nc|ENSG00000167889|Q3V5L5-5|MGAT5B', 'ENSG00000167889|ENST00000569840|MGAT5B', 'nc|ENSG00000167889|Q3V5L5-2|MGAT5B'] 56280 6010 LDADPVQPGI True H1975_Epitope_Rep3 1023.5236753068698 1023.5225699358599 28.13 2 -1.9758148034274339 0.45353963177456996 1.0 ['ENST00000541565.5_1_1:210761328-210796973:+|nuORF'] 32605 21123 GGHGRGAR True PC9_epitope_Rep5 766.3946672563399 766.39356993586 86.31 2 -1.9758939761596561 0.45353963177456996 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 14676 13686 DVGRRRKH True PC9_epitope_Rep5 1022.5845932843399 1022.58348993586 57.67 2 -1.9759160028188487 0.45353963177456996 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 12192 8324 DIFPARDTY True H1975_Epitope_Rep1 1096.5189242796 1096.5178299358602 36.95 2 -1.976325590441977 0.45357906790830327 1.0 ['nc|ENSG00000185499|P15941-2|MUC1', 'nc|ENSG00000185499|P15941-17|MUC1', 'nc|ENSG00000185499|P15941|MUC1', 'nc|ENSG00000185499|P15941-3|MUC1', 'nc|ENSG00000185499|P15941-4|MUC1', 'ENSG00000185499|ENST00000620103|MUC1', 'nc|ENSG00000185499|P15941-8|MUC1', 'nc|ENSG00000185499|P15941-11|MUC1', 'nc|ENSG00000185499|P15941-7|MUC1', 'ENST00000468978.2_1_1:155159604-155160306:-|nuORF', 'nc|ENSG00000185499|P15941-6|MUC1', 'nc|ENSG00000185499|P15941-15|MUC1', 'nc|ENSG00000185499|P15941-10|MUC1', 'nc|ENSG00000185499|P15941-9|MUC1', 'nc|ENSG00000185499|P15941-16|MUC1', 'nc|ENSG00000185499|P15941-12|MUC1'] 95372 16121 RVWLQPRPL True PC9_epitope_Rep5 1163.6927467509897 1163.69110490379 67.0 3 -1.9764364821801113 0.45357906790830327 1.0 ['ENST00000463471.6_1_1:2491166-2493466:+|nuORF', 'ENST00000496064.5_1_1:2491286-2492222:+|nuORF'] 72457 27885 MKVFFVKYND True NCI_RA007_Epitope_Rep1 1289.6478302741698 1289.64619490379 117.15 3 -1.9764602161985607 0.45357906790830327 1.0 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.R445Pfs*20|1|0.46|ENSG00000100280|chr22:29349321-29349322|-/G|frameshift_variant'] 18476 16864 EKEERRDWLKR True PC9_epitope_Rep2 1543.8219229972299 1543.8202649037903 70.115 3 -1.976465901299277 0.45357906790830327 1.0 ['TCHH|p.Q451K|1|0.24|ENSG00000159450|chr1:152111866-152111866|G/T|missense_variant'] 30512 8220 GAGHAWPG True H1975_Epitope_Rep2 751.3401720719899 751.33962496793 36.572 1 -1.9765800508225921 0.45357906790830327 1.0 ['ENST00000564098.5_1_16:1795439-1795685:+|nuORF'] 80190 20100 PFVIMIAC True PC9_epitope_Rep6 892.4550677951999 892.45396993586 89.99 2 -1.9766090370745688 0.45357906790830327 1.0 ['C3AR1|p.S349F|1|0.18|ENSG00000171860|chr12:8059140-8059140|G/A|missense_variant'] 130032 25033 VSARIVTA True PC9_epitope_Rep5 815.4865019525099 815.4859549679301 101.43 1 -1.976673684018796 0.45357906790830327 1.0 ['ENST00000471887.1_1_7:18557286-18557502:+|nuORF'] 91323 16052 RGRPIVSA True NCI_RA007_Epitope_Rep3 854.50863437942 854.50752993586 70.827 2 -1.9767029357964307 0.45357906790830327 1.0 ['ITGA5|p.E895Kfs*15|1|0.2|ENSG00000161638|chr12:54399908-54399908|C/-|frameshift_variant', 'ENSG00000161638|ENST00000293379|ITGA5', 'ENST00000552564.5_1_12:54797354-54798257:-|nuORF'] 127251 22065 VLYHQLRDW True PC9_epitope_Rep6 1228.63529144452 1228.6336349037902 97.806 3 -1.9770760437818813 0.45357906790830327 1.0 ['TMEM150B|p.R73L|1|0.16|ENSG00000180061|chr19:55320145-55320145|C/A|missense_variant'] 104638 9094 SQSTSLRGSY True NCI_RA007_Epitope_Rep2 1084.51490152832 1084.51380993586 39.977 2 -1.9771008787594293 0.45357906790830327 1.0 ['ENSG00000153714|ENST00000319264|LURAP1L'] 32414 18001 GFSCYCPL True PC9_epitope_Rep6 888.3509966494798 888.34988993586 81.868 2 -1.9771590400917152 0.45357906790830327 1.0 ['ENST00000315970.11_1_12:58114859-58115021:+|nuORF'] 87859 5860 QRHYHPHWHFW True H1975_Epitope_Rep1 1629.7490328404901 1629.7479299358602 27.61 2 -1.977170135824504 0.45357906790830327 1.0 ['ENST00000331803.8_1_7:48142961-48146533:+|nuORF'] 112861 15929 TLKGSTLN True NCI_RA007_Epitope_Rep4 832.46543215476 832.4648849679301 69.139 1 -1.9772438580338927 0.45357906790830327 1.0 ['ENST00000480626.5_1_3:58417333-58419536:-|nuORF'] 60820 21967 LHTLHHIL True PC9_epitope_Rep1 982.5712346359801 982.57012993586 89.315 2 -1.9772740975272822 0.45357906790830327 1.0 ['ENSG00000197110|ENST00000413851|IFNL3', 'ENSG00000183709|ENST00000331982|IFNL2', 'IFNL2|p.Q136L|1|0.14|ENSG00000183709|chr19:39269624-39269624|A/T|missense_variant', 'ENSG00000182393|ENST00000333625|IFNL1'] 70435 1524 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 7.9153 3 -1.9775433465065841 0.4535849708859529 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 33813 8481 GLLSPERAV True PC9_epitope_Rep2 940.5341804209199 940.53308993586 37.989 2 -1.9775702628910865 0.4535859737061003 1.0 ['ENST00000316509.10_2_17:8062733-8062859:-|nuORF'] 40554 4198 HRFWNLWRSQI True NCI_RA007_Epitope_Rep1 1541.8003997070098 1541.79874490379 20.429 3 -1.97764035930892 0.4535859737061003 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1'] 36819 9436 GVLFFADD True NCI_RA007_Epitope_Rep3 882.4123339527399 882.41122993586 44.198 2 -1.9778583400694059 0.4535869764829158 1.0 ['ENSG00000112309|ENST00000230053|B3GAT2', 'B3GAT2|p.Q177H|1|0.58|ENSG00000112309|chr6:70955899-70955899|C/A|missense_variant'] 37146 4536 GVQFPHILTN True PC9_epitope_Rep4 1124.59784330664 1124.5961849037901 23.936 3 -1.9779447880195646 0.4535869764829158 1.0 ['L1MB8_dup1763|chr2:109988481-109989376:-|1.014056839554144|0.259115602067641|1.97|534.0|41|1|anti-sense'] 53758 17340 KSSGGKVP True H1975_Epitope_Rep2 758.4286527232199 758.42810496793 71.993 1 -1.9779946175967178 0.4535879792164022 1.0 ['SPEF2|p.D1760Tfs*2|1|0.1|ENSG00000152582|chr5:35807152-35807152|G/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2'] 107656 10515 SVQLLYSRV True PC9_epitope_Rep6 1063.60259433391 1063.6014899358602 51.234 2 -1.9779980904586199 0.4535879792164022 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 48759 16811 KDKKGRAP True NCI_RA007_Epitope_Rep4 898.5348491272598 898.5343049679301 72.843 1 -1.9781798817982763 0.45362628815866224 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 71238 14435 LYPHRKNV True PC9_epitope_Rep5 1025.57704829241 1025.57594993586 60.524 2 -1.9783218180888413 0.45363219011612205 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13'] 129705 22446 VRPQMETT True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 93.509 2 -1.9784442616944784 0.4536322986196617 1.0 ['ENST00000423112.2_1_9:3568814-3671485:+|nuORF'] 2477 5031 AEQLRGFNA True PC9_epitope_Rep6 1004.5039429217999 1004.50284993586 26.977 2 -1.978480555779489 0.4536322986196617 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 127621 23690 VPAAAPAH True NCI_RA007_Epitope_Rep1 732.39187329168 732.39132496793 97.807 1 -1.9786415320035082 0.4536322986196617 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B', 'KIF26B|p.A1114Vfs*2|1|0.6|ENSG00000162849|chr1:245686323-245686324|GC/-|frameshift_variant'] 123152 21748 VGKRNARA True PC9_epitope_Rep2 870.5147823890198 870.5142349679301 89.124 1 -1.9787232972122948 0.4536322986196617 1.0 ['ENST00000405731.7_1_7:6618146-6618326:+|nuORF', 'ENST00000396707.6_1_7:6617123-6618326:+|nuORF'] 55642 11891 LAKLGGAG True H1975_Epitope_Rep1 685.4122743830899 685.41172496793 50.739 1 -1.9787912327905735 0.4536322986196617 1.0 ['ENSG00000213906|ENST00000533293|LTB4R2'] 123601 5423 VGQDSIHV True NCI_RA007_Epitope_Rep3 853.4293809992099 853.42828993586 28.342 2 -1.9788364913947172 0.4536322986196617 1.0 ['ENSG00000110799|ENST00000261405|VWF'] 127622 22510 VPAAAPAH True NCI_RA007_Epitope_Rep3 732.39187329168 732.39132496793 97.848 1 -1.9788550688242281 0.4536322986196617 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B', 'KIF26B|p.A1114Vfs*2|1|0.6|ENSG00000162849|chr1:245686323-245686324|GC/-|frameshift_variant'] 127624 23602 VPAAAPAH True NCI_RA007_Epitope_Rep5 732.39187329168 732.39132496793 98.102 1 -1.9788708756745224 0.4536322986196617 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'KIF26B|p.S1720Afs*16|1|0.5|ENSG00000162849|chr1:245688135-245688135|C/-|frameshift_variant', 'ENSG00000162849|ENST00000407071|KIF26B', 'KIF26B|p.A1114Vfs*2|1|0.6|ENSG00000162849|chr1:245686323-245686324|GC/-|frameshift_variant'] 48597 3164 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 16.661 3 -1.978961100714927 0.4536322986196617 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 65662 7490 LSAPATKDSE True H1975_Epitope_Rep1 1017.49785448185 1017.49674993586 33.806 2 -1.9789795881447012 0.4536322986196617 1.0 ['nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3'] 114280 21096 TPPMGDVH True NCI_RA007_Epitope_Rep5 852.37998827864 852.37888993586 88.165 2 -1.979043015529627 0.4536322986196617 1.0 ['ENSG00000117016|ENST00000372684|RIMS3'] 91769 20385 RKFVGGSG True NCI_RA007_Epitope_Rep5 806.4398861132598 806.43878993586 85.346 2 -1.9794081843170621 0.45364220530266214 1.0 ['ENSG00000189221|ENST00000338702|MAOA', 'nc|ENSG00000189221|P21397-2|MAOA', 'nc|ENSG00000069535|P27338-2|MAOB', 'ENSG00000069535|ENST00000378069|MAOB'] 18339 11490 EISTVHPEQ True PC9_epitope_Rep4 1038.4981888350198 1038.49708993586 51.958 2 -1.979439997233813 0.45364220530266214 1.0 ['nc|ENSG00000166908|Q8TBX8-2|PIP4K2C', 'nc|ENSG00000166908|Q8TBX8-3|PIP4K2C', 'ENSG00000166908|ENST00000354947|PIP4K2C'] 52537 15658 KLETHIEK True PC9_epitope_Rep4 996.5603951687599 996.55928993586 68.155 2 -1.9794490155641586 0.45364220530266214 1.0 ['nc|ENSG00000132952|Q5W0Q7-2|USPL1', 'ENSG00000132952|ENST00000255304|USPL1'] 85685 17455 QGTKIVCRH True NCI_RA007_Epitope_Rep2 1040.55493294884 1040.55437496793 72.63 1 -1.9795243092500827 0.45364220530266214 1.0 ['ENSG00000068654|ENST00000263857|POLR1A'] 52564 27955 KLHAGEKLYEC True PC9_epitope_Rep5 1289.6438075228898 1289.64217490379 115.34 3 -1.9795756061579413 0.45364220530266214 1.0 ['ZNF320|p.T408A|1|0.2|ENSG00000182986|chr19:52880904-52880904|T/C|missense_variant'] 35314 18649 GRNEEGIFR True PC9_epitope_Rep1 1076.5363056792398 1076.5352099358602 76.522 2 -1.9796102622844904 0.45364220530266214 1.0 ['nc|ENSG00000163219|P42331-5|ARHGAP25', 'nc|ENSG00000163219|P42331-3|ARHGAP25', 'nc|ENSG00000163219|P42331-6|ARHGAP25', 'nc|ENSG00000163219|P42331|ARHGAP25', 'ENSG00000163219|ENST00000409202|ARHGAP25', 'ENST00000488795.1_1_2:69034406-69043495:+|nuORF', 'ENST00000473986.1_1_2:69009370-69040541:+|nuORF', 'nc|ENSG00000163219|P42331-2|ARHGAP25'] 105646 8683 SSEEDLLVSW True NCI_RA007_Epitope_Rep2 1163.5346339133898 1163.53352993586 38.422 2 -1.9796323613526579 0.45364220530266214 1.0 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1', 'ENST00000454762.1_1_6:43472456-43473590:+|nuORF'] 131738 14373 VTPKDQGY True PC9_epitope_Rep5 906.4446967101799 906.44358993586 60.285 2 -1.9797247049074667 0.45364220530266214 1.0 ['ENSG00000152580|ENST00000282466|IGSF10', 'IGSF10|p.S862Tfs*18|1|0.03|ENSG00000152580|chr3:151447398-151447399|-/CCCCAATAACAGTA|frameshift_variant'] 44201 24139 IKARGRFG True NCI_RA007_Epitope_Rep5 903.5402688608699 903.53916993586 100.26 2 -1.9797888877006278 0.45364220530266214 1.0 ['ENSG00000114739|ENST00000352511|ACVR2B', 'ENST00000465020.5_1_3:38519799-38524820:+|nuORF'] 10445 24818 CHSTVITP True PC9_epitope_Rep3 856.41128840692 856.41018993586 100.84 2 -1.9799554562662003 0.45365890535228304 1.0 ['nc|ENSG00000255298|Q8NG78|OR8G5', 'ENST00000533406.2_1_11:124085485-124086391:+|nuORF', 'nc|ENSG00000255425|P0DMU2|OR8G3P', 'ENSG00000255298|ENST00000641992|OR8G5', 'OR8G1|p.F71L|1|0.18|ENSG00000197849|chr11:124249888-124249888|C/A|missense_variant', 'OR8G5|p.P130Lfs*4|1|0.24|ENSG00000255298|chr11:124265213-124265213|C/-|frameshift_variant', 'ENSG00000197849|ENST00000641972|OR8G1'] 40172 22510 HQEFSHWL True PC9_epitope_Rep4 1082.4933782381 1082.49228993586 94.816 2 -1.9804178508761674 0.45366480555525557 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'ENST00000580882.5_1_17:26966325-26972074:-|nuORF'] 128265 14889 VPPHGPAS True NCI_RA007_Epitope_Rep5 760.38678791124 760.38623496793 63.94 1 -1.9805556506358286 0.4536727068529837 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3', 'ENSG00000132970|ENST00000335327|WASF3', 'ENST00000489446.1_1_2:23755466-23866061:+|nuORF'] 60125 25733 LGLVHPPP True PC9_epitope_Rep3 828.48577367652 828.4852249679301 104.55 1 -1.9806360486485004 0.4536727068529837 1.0 ['ENOX1|p.P101H|1|0.12|ENSG00000120658|chr13:43361359-43361359|G/T|missense_variant'] 101127 20969 SLGPGSVM True PC9_epitope_Rep4 746.36327558534 746.36272496793 88.819 1 -1.9808553320309752 0.4536727068529837 1.0 ['ENSG00000112812|ENST00000230582|PRSS16'] 91382 12117 RHERIEAPW True PC9_epitope_Rep6 1192.6101393258398 1192.60849490379 57.952 3 -1.9808570101826086 0.4536727068529837 1.0 ['ENSG00000158042|ENST00000288937|MRPL17'] 62917 22819 LLPCLHSA True PC9_epitope_Rep6 852.45275929608 852.45166993586 100.87 2 -1.980888749864201 0.4536727068529837 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 111934 17722 TIPTAMGP True H1975_Epitope_Rep3 786.39457571362 786.39402496793 74.092 1 -1.9809976998776748 0.45370020409705947 1.0 ['ENST00000375107.7_1_6:32143725-32143884:-|nuORF'] 12289 10249 DILVFGALIY True PC9_epitope_Rep2 1122.63249747986 1122.6308549037901 44.756 3 -1.9810897695932788 0.45370130431027034 1.0 ['DOCK2|p.D675G|1|0.07|ENSG00000134516|chr5:169716295-169716295|A/G|missense_variant'] 91869 22143 RKKLYELLY True PC9_epitope_Rep6 1224.72304381976 1224.72139490379 98.115 3 -1.9811713984652823 0.45370130431027034 1.0 ['ENST00000565367.5_1_15:55647651-55647789:+|nuORF'] 114070 16591 TPFATPLSF True PC9_epitope_Rep1 979.5014833103099 979.50038993586 68.642 2 -1.98119685872154 0.45370130431027034 1.0 ['LRFN2|p.P233T|1|0.2|ENSG00000156564|chr6:40432417-40432417|G/T|missense_variant'] 20864 19218 EQLDFLRIYFQ True PC9_epitope_Rep1 1470.7507151195798 1470.74960993586 78.719 2 -1.9812971801426982 0.45370130431027034 1.0 ['ENST00000372257.6_1_1:44804763-44804952:-|nuORF'] 61485 24338 LKARPAQR True PC9_epitope_Rep5 938.57738264558 938.57628993586 98.651 2 -1.9813709821079122 0.45370130431027034 1.0 ['ENST00000396865.6_1_5:54993817-55008116:-|nuORF', 'ENST00000506624.5_2_5:55007270-55008116:-|nuORF', 'ENST00000513993.5_1_5:55000175-55008116:-|nuORF'] 20597 20844 EPSTIPPCRR True PC9_epitope_Rep4 1154.5866269999399 1154.58607496793 88.329 1 -1.9813859480512452 0.45370130431027034 1.0 ['ENST00000537165.5_1_12:109907385-109907427:-|nuORF'] 8246 9298 ATGPSAHEE True H1975_Epitope_Rep2 897.3828247296101 897.38227496793 40.723 1 -1.9815389532612822 0.45370130431027034 1.0 ['DCAF6|p.G730Vfs*5|1|0.18|ENSG00000143164|chr1:168065609-168065609|G/-|frameshift_variant', 'nc|ENSG00000143164|Q58WW2|DCAF6', 'nc|ENSG00000143164|Q58WW2-2|DCAF6', 'nc|ENSG00000143164|Q58WW2-4|DCAF6', 'ENSG00000143164|ENST00000367840|DCAF6'] 80369 10263 PGHGFCSP True H1975_Epitope_Rep2 800.3275587829601 800.3270049679301 44.482 1 -1.9815453251793291 0.45370130431027034 1.0 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF'] 93457 14900 RQHRGAGG True H1975_Epitope_Rep3 837.4317810410497 837.43068993586 62.699 2 -1.9815947059375212 0.45370130431027034 1.0 ['ENST00000570731.5_1_17:1666139-1673249:+|nuORF', 'ENST00000254722.8_1_17:1665354-1673249:+|nuORF'] 102582 9331 SLWAWVERE True H1975_Epitope_Rep3 1174.5771078620598 1174.5760099358602 40.889 2 -1.9816463823524766 0.45370130431027034 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 24939 23025 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 95.804 2 -1.9818106004039604 0.45370130431027034 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 136010 23267 WQVGLRFL True PC9_epitope_Rep3 1017.5759856632499 1017.57488993586 94.774 2 -1.9819808416053333 0.45370130431027034 1.0 ['OVCH1|p.L659Qfs*9|1|0.17|ENSG00000187950|chr12:29464656-29464656|A/-|frameshift_variant', 'OVCH1|p.G702Dfs*11|1|0.42|ENSG00000187950|chr12:29464529-29464529|G/-|frameshift_variant', 'ENSG00000187950|ENST00000537054|OVCH1', 'nc|ENSG00000187950|Q7RTY7|OVCH1'] 103092 13965 SPGTRSKA True NCI_RA007_Epitope_Rep5 802.42971535238 802.4291649679301 60.4 1 -1.9820094937204984 0.45370130431027034 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000471582.5_1_20:61956720-61961007:+|nuORF', 'ENST00000479501.5_1_20:61950534-61961007:+|nuORF'] 30565 5667 GAHGGGAF True H1975_Epitope_Rep3 672.2979729068401 672.29742496793 26.827 1 -1.9822900788552207 0.4537170988707274 1.0 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A', 'ENST00000485270.5_1_10:82033539-82034994:-|nuORF', 'ENSG00000151224|ENST00000372213|MAT1A'] 32273 18945 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 79.71 2 -1.9823563862403693 0.4537170988707274 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 127876 14057 VPGFCPGH True H1975_Epitope_Rep2 812.3639442916799 812.36339496793 59.222 1 -1.9823981704015796 0.4537170988707274 1.0 ['ENST00000314289.12_2_4:2516465-2516672:+|nuORF'] 128056 25129 VPKPLKFLR True PC9_epitope_Rep5 1096.71208521324 1096.7109899358602 101.8 2 -1.9824239874724847 0.4537170988707274 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF', 'PSMD2|p.S91L|1|0.18|ENSG00000175166|chr3:184300359-184300359|C/T|missense_variant', 'ENST00000492191.5_1_3:184017042-184018322:+|nuORF'] 30506 13619 GAGGIPGY True NCI_RA007_Epitope_Rep1 690.33368970922 690.33314496793 56.986 1 -1.9824364049092915 0.4537170988707274 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|288|1|anti-sense'] 52920 19042 KPGKMFVLR True NCI_RA007_Epitope_Rep2 1074.6372060208198 1074.63610993586 78.921 2 -1.9824423143764565 0.4537170988707274 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 80824 24709 PHPIVLGI True NCI_RA007_Epitope_Rep2 844.5170738048 844.51596993586 103.87 2 -1.9824526997665548 0.4537170988707274 1.0 ['ENST00000397354.7_1_X:39933702-39933888:-|nuORF'] 63678 17078 LMSSGGSK True H1975_Epitope_Rep2 765.3690892417701 765.36854496793 70.956 1 -1.9824640514862046 0.4537170988707274 1.0 ['ENSG00000164532|ENST00000408931|TBX20', 'ENST00000492961.1_1_7:35271114-35293240:-|nuORF', 'TBX20|p.A21D|1|0.27|ENSG00000164532|chr7:35253559-35253559|G/T|missense_variant'] 46093 6640 ISHIYSPQK True NCI_RA007_Epitope_Rep3 1071.57129420563 1071.57018993586 33.187 2 -1.9824731778464293 0.4537170988707274 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 36288 2696 GVEATVPGI True PC9_epitope_Rep1 841.4545331178898 841.45342993586 14.793 2 -1.9824968395912854 0.4537170988707274 1.0 ['nc|ENSG00000089847|Q8TF21-2|ANKRD24', 'ENSG00000089847|ENST00000318934|ANKRD24'] 30751 9899 GALPSGQK True NCI_RA007_Epitope_Rep2 756.41300265908 756.4124549679301 43.133 1 -1.9826005518115948 0.4537337925226986 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'ENST00000561573.1_1_15:90806992-90815017:+|nuORF', 'NGRN|p.E260A|1|0.11|ENSG00000182768|chr15:90271691-90271691|A/C|missense_variant'] 129453 25601 VRHKKPVN True PC9_epitope_Rep5 976.59303270972 976.5924849679301 103.79 1 -1.9827201266705619 0.45373968994256597 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 29131 10193 FTLYLTYEL True NCI_RA007_Epitope_Rep3 1161.59577761797 1161.59468993586 47.177 2 -1.9831500265851907 0.45377797450042645 1.0 ['nc|ENSG00000066427|P54252-1|ATXN3'] 91335 19895 RGRRWTLA True H1975_Epitope_Rep3 1014.5835306551799 1014.58242993586 83.285 2 -1.9832797134768352 0.45381625823167443 1.0 ['ENST00000299977.8_1_17:33585758-33585863:+|nuORF'] 23029 11207 EVGKDERVI True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 50.884 2 -1.9833601857966787 0.45381725537611195 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'ENST00000533912.1_1_6:131191025-131199321:-|nuORF'] 37448 21861 GVTLPPTP True PC9_epitope_Rep2 780.43815477776 780.43760496793 89.563 1 -1.9834262427454614 0.45381725537611195 1.0 ['nc|ENSG00000179889|Q6P996-3|PDXDC1', 'nc|ENSG00000179889|Q6P996-4|PDXDC1', 'nc|ENSG00000179889|Q6P996-5|PDXDC1', 'ENSG00000179889|ENST00000396410|PDXDC1'] 87482 23047 QQDSGGGGGG True H1975_Epitope_Rep3 818.3154734457797 818.3149249679301 96.259 1 -1.9834442038416729 0.4538182524774921 1.0 ['nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1'] 89795 16843 RALHSSLSRP True PC9_epitope_Rep3 1122.6257893899801 1122.62413490379 69.94 3 -1.9836230628378262 0.4538182524774921 1.0 ['ENST00000376395.8_2_9:86322580-86322796:-|nuORF'] 112761 3144 TLHMMYHE True H1975_Epitope_Rep1 1060.44702229264 1060.44592993586 15.997 2 -1.9837586847127098 0.45383203799654576 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 33334 23496 GKPSRRPQNKR True PC9_epitope_Rep4 1322.76434855146 1322.7632499358601 98.681 2 -1.9838334530972075 0.45383203799654576 1.0 ['ENST00000539322.5_1_16:19566903-19576184:+|nuORF'] 25844 8248 FFFFPFREEME True H1975_Epitope_Rep1 1524.674773298 1524.67366993586 36.669 2 -1.983841938295402 0.45383203799654576 1.0 ['ENST00000489613.1_1_2:234294779-234297133:+|nuORF'] 75715 24739 NLKLKKPP True H1975_Epitope_Rep3 936.6120368188 936.61092993586 102.9 2 -1.9840106635467094 0.45383203799654576 1.0 ['ENST00000593607.1_1_19:54120057-54120405:+|nuORF', 'ENST00000510556.1_1_4:109571811-109578607:+|nuORF', 'ENST00000424397.2_1_4:113606219-113606393:+|nuORF', 'ENSG00000198856|ENST00000361564|OSTC', 'nc|ENSG00000198856|Q9NRP0-2|OSTC'] 77949 13164 NVLIQESETF True H1975_Epitope_Rep3 1178.58191845898 1178.58082993586 55.886 2 -1.9840191381258219 0.45383203799654576 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'nc|ENSG00000139220|O75334-7|PPFIA2'] 33299 21466 GKPHGRGV True PC9_epitope_Rep1 806.4511195033 806.45002993586 87.411 2 -1.984102371861976 0.45383203799654576 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.W1179Cfs*25|1|0.06|ENSG00000003393|chr2:201723411-201723423|ATCTTGCCACATT/-|frameshift_variant', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 104874 12416 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 54.415 2 -1.984248051448832 0.4538379335283514 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 53762 18349 KSTAKRAR True NCI_RA007_Epitope_Rep4 916.5566472009999 916.55554993586 79.383 2 -1.9842849203868407 0.4538438289328814 1.0 ['ENSG00000137252|ENST00000370862|HCRTR2'] 129684 16819 VRPLQQLGQR True NCI_RA007_Epitope_Rep5 1193.69928868341 1193.69818993586 71.441 2 -1.9845270445963281 0.4538605183338191 1.0 ['ENSG00000167434|ENST00000300900|CA4'] 89979 3071 RDHNFFVFLE True NCI_RA007_Epitope_Rep2 1322.64077074778 1322.6391149037902 16.56 3 -1.9847527799382076 0.4538772073744657 1.0 ['nc|ENSG00000172803|Q86XE0-2|SNX32', 'ENST00000530101.5_1_11:65601488-65618753:+|nuORF', 'SNX32|p.S300Tfs*76|1|0.14|ENSG00000172803|chr11:65852536-65852537|CT/-|frameshift_variant', 'ENSG00000172803|ENST00000308342|SNX32', 'ENST00000526972.5_1_11:65617878-65618753:+|nuORF'] 21567 8508 ERPYWEMTN True NCI_RA007_Epitope_Rep4 1224.5233580370398 1224.52171490379 39.523 3 -1.9849396103156187 0.453893896054833 1.0 ['nc|ENSG00000145242|P54756-3|EPHA5', 'nc|ENSG00000145242|P54756|EPHA5', 'EPHA5|p.L1002Wfs*4|1|0.09|ENSG00000145242|chr4:65331978-65331978|G/-|frameshift_variant', 'nc|ENSG00000145242|P54756-2|EPHA5', 'ENSG00000145242|ENST00000613740|EPHA5'] 92021 25237 RKRRPKREKH True PC9_epitope_Rep2 1389.8541666153696 1389.85306993586 102.74 2 -1.9853687353071907 0.4539223728520853 1.0 ['ENSG00000135250|ENST00000393651|SRPK2', 'ENST00000460391.5_3_7:104909300-105029331:-|nuORF', 'ENST00000482862.1_1_7:104909300-105029811:-|nuORF'] 125628 13988 VKKRAIVKKLP True PC9_epitope_Rep5 1278.8863611770998 1278.8847149037902 58.826 3 -1.9854528073445636 0.4539223728520853 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ATP2C1|p.E385Gfs*5|1|0.21|ENSG00000017260|chr3:130967171-130967172|-/G|frameshift_variant'] 18087 9344 EIHRELRPQG True PC9_epitope_Rep1 1233.65781779425 1233.65672993586 40.799 2 -1.9854787761590607 0.4539223728520853 1.0 ['ENSG00000142684|ENST00000374266|ZNF593'] 53524 20541 KRLKKEKVNVD True H1975_Epitope_Rep2 1355.8248831193498 1355.82378993586 85.099 2 -1.9855047279768885 0.45392826689980464 1.0 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4'] 84673 19387 QDISVHKLK True NCI_RA007_Epitope_Rep2 1066.61349337078 1066.6129749679299 80.315 1 -1.9857397246026203 0.45396654074473825 1.0 ['ENSG00000124383|ENST00000244230|MPHOSPH10'] 64864 8835 LQDQVRASAT True H1975_Epitope_Rep2 1087.56218607391 1087.56108993586 38.951 2 -1.9859210637047735 0.4539675344299098 1.0 ['ENST00000278407.8_1_11:57382057-57382189:+|nuORF'] 117410 9276 TVPRAFLK True H1975_Epitope_Rep3 930.5650866263799 930.56398993586 40.674 2 -1.9859333101080203 0.4539675344299098 1.0 ['GALNT15|p.L434*|1|0.2|ENSG00000131386|chr3:16212669-16212669|C/-|frameshift_variant', 'ENSG00000131386|ENST00000339732|GALNT15'] 126898 14429 VLQPQRVL True PC9_epitope_Rep4 951.5865503469498 951.58544993586 63.41 2 -1.9862404231840562 0.4539793209143696 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 38136 24652 HDALYVVG True H1975_Epitope_Rep1 872.43921740692 872.43812993586 102.14 2 -1.9862936037419223 0.4539793209143696 1.0 ['ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'ENST00000478105.5_1_21:47981571-47987532:+|nuORF'] 123003 7185 VGIGIKGK True NCI_RA007_Epitope_Rep3 770.50142374066 770.50087496793 35.375 1 -1.986631717025599 0.45398044843436414 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C', 'ATP11C|p.T977Lfs*10|1|0.31|ENSG00000101974|chrX:139745767-139745767|C/-|frameshift_variant'] 118114 16720 TYHMWWVCFWH True H1975_Epitope_Rep2 1594.66383177482 1594.6627299358602 69.55 2 -1.9866852638759875 0.45398044843436414 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 22650 18006 ETPLLKNDP True PC9_epitope_Rep2 1025.53932537101 1025.53822993586 74.564 2 -1.9868538728064549 0.45398044843436414 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 8970 25793 AVGHHISE True PC9_epitope_Rep2 848.4140652882401 848.41296993586 104.94 2 -1.9869727208678274 0.45398044843436414 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 79177 10575 PAPAKPKEE True PC9_epitope_Rep4 965.5181960036099 965.51708993586 48.416 2 -1.9870891190423392 0.45398044843436414 1.0 ['ENSG00000168530|ENST00000352451|MYL1'] 30815 14290 GAPAGSHA True NCI_RA007_Epitope_Rep3 666.30853759054 666.3079849679301 63.532 1 -1.9871497397172422 0.45398044843436414 1.0 ['nc|ENSG00000175416|P09497-2|CLTB', 'ENSG00000175416|ENST00000310418|CLTB'] 48574 4272 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 21.405 3 -1.9872980983723023 0.45398044843436414 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 95134 18152 RVFNRREI True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 79.522 2 -1.987339462679005 0.45398044843436414 1.0 ['ENST00000298130.4_1_14:34903533-34903665:-|nuORF'] 110640 18729 TFVRERAA True NCI_RA007_Epitope_Rep4 948.5141136826799 948.5130099358599 81.029 2 -1.9873766740158134 0.45398044843436414 1.0 ['ENSG00000124659|ENST00000372876|TBCC'] 61484 21485 LKARPAQR True NCI_RA007_Epitope_Rep1 938.57738264558 938.57628993586 87.911 2 -1.9874157519683193 0.45398044843436414 1.0 ['ENST00000396865.6_1_5:54993817-55008116:-|nuORF', 'ENST00000506624.5_2_5:55007270-55008116:-|nuORF', 'ENST00000513993.5_1_5:55000175-55008116:-|nuORF'] 112108 9404 TIVSSKKIT True PC9_epitope_Rep2 975.59644632431 975.59534993586 41.511 2 -1.987480595570177 0.45398044843436414 1.0 ['ENSG00000140848|ENST00000290776|CPNE2', 'nc|ENSG00000140848|Q96FN4-2|CPNE2'] 105381 25067 SRRSKLKV True NCI_RA007_Epitope_Rep5 972.6192474575598 972.61814993586 103.92 2 -1.9875921028355363 0.45398044843436414 1.0 ['nc|ENSG00000173894|Q14781-2|CBX2'] 105870 8779 SSPAQPPD True PC9_epitope_Rep5 797.35554735261 797.35444993586 38.711 2 -1.987726772494807 0.45398044843436414 1.0 ['ENSG00000177363|ENST00000317449|LRRN4CL'] 63368 8911 LLVAELTA True NCI_RA007_Epitope_Rep1 828.49566965388 828.49456993586 38.662 2 -1.987885218005649 0.45398044843436414 1.0 ['ENST00000370620.5_1_X:135749294-135749660:-|nuORF'] 104583 4804 SQRFQFEFPYV True H1975_Epitope_Rep3 1446.69320024346 1446.6921099358601 23.606 2 -1.9878975965311623 0.45398044843436414 1.0 ['ENSG00000152784|ENST00000415738|PRDM8', 'nc|ENSG00000152784|Q9NQV8-2|PRDM8'] 24940 23837 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 99.055 2 -1.9879373473987385 0.45398044843436414 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 60058 13720 LGLELRPEA True PC9_epitope_Rep5 996.5603951687599 996.55928993586 57.8 2 -1.9879941614904544 0.45398044843436414 1.0 ['ENSG00000142327|ENST00000270357|RNPEPL1'] 13856 7052 DQPRPKGP True PC9_epitope_Rep1 893.4719145175299 893.47080993586 31.932 2 -1.9880520042793748 0.45398044843436414 1.0 ['ENSG00000104953|ENST00000246112|TLE6'] 75010 13688 NHSCSKSS True NCI_RA007_Epitope_Rep4 848.3446653990801 848.34356993586 59.876 2 -1.9881207058008303 0.45398044843436414 1.0 ['nc|ENSG00000189367|Q6ZU52-2|KIAA0408', 'ENST00000368281.1_1_6:127765256-127771512:-|nuORF', 'ENSG00000189367|ENST00000483725|KIAA0408'] 65526 22823 LRQRHQHQR True PC9_epitope_Rep6 1257.6915179643702 1257.69042993586 100.88 2 -1.98815396462109 0.45398044843436414 1.0 ['ENSG00000112309|ENST00000230053|B3GAT2', 'B3GAT2|p.Q177H|1|0.58|ENSG00000112309|chr6:70955899-70955899|C/A|missense_variant'] 44458 22599 ILKNYNNFYRF True PC9_epitope_Rep2 1490.76703389006 1490.7659299358602 92.427 2 -1.9883470518161361 0.45398044843436414 1.0 ['nc|ENSG00000168491|Q8TBZ0-2|CCDC110', 'ENSG00000168491|ENST00000307588|CCDC110'] 43228 14512 IFKRGKKH True PC9_epitope_Rep4 1012.6294182184399 1012.62832993586 63.734 2 -1.988402830594995 0.45398044843436414 1.0 ['ANKAR|p.E1355K|1|0.07|ENSG00000151687|chr2:189746385-189746385|G/A|missense_variant'] 26972 5090 FLEEATEA True NCI_RA007_Epitope_Rep4 908.4127278755599 908.41162993586 26.086 2 -1.9884609207974804 0.45398044843436414 1.0 ['ENST00000505030.5_1_5:87961954-87962140:-|nuORF'] 75785 20767 NLMDFVKKTG True PC9_epitope_Rep5 1151.60088008175 1151.6003749679298 84.931 1 -1.988474110708147 0.45398044843436414 1.0 ['ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C', 'ENST00000599239.5_1_19:48565437-48599986:-|nuORF'] 91209 11722 RGDGTRAH True PC9_epitope_Rep4 868.42636130744 868.42526993586 52.85 2 -1.9886040471903637 0.4539814415192059 1.0 ['ENST00000447600.1_1_1:11159806-11161858:+|nuORF'] 110139 3983 TENELLQMFY True H1975_Epitope_Rep3 1286.58528958726 1286.5841899358602 20.447 2 -1.988614328550197 0.4539814415192059 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 112935 25302 TLLIVTIVAT True PC9_epitope_Rep2 1042.66379760814 1042.66327496793 103.0 1 -1.9887104609494148 0.4539824345611877 1.0 ['ENSG00000174125|ENST00000308979|TLR1'] 141773 17817 YVAKHTRI True PC9_epitope_Rep2 986.5661492555399 986.56504993586 73.827 2 -1.9887448085106563 0.4539824345611877 1.0 ['ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808', 'ZNF611|p.L553V|1|0.1|ENSG00000213020|chr19:52705398-52705398|G/C|missense_variant'] 61085 26887 LIHGTADD True PC9_epitope_Rep5 840.39774651776 840.39664993586 109.84 2 -1.9890883645588855 0.45403842627053737 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 81738 21458 PLPCSHPA True PC9_epitope_Rep6 820.39015903952 820.38906993586 95.413 2 -1.9893066494868585 0.45403842627053737 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 82750 22589 PRKPRRNQR True PC9_epitope_Rep4 1206.71700443622 1206.71647496793 95.12 1 -1.9893230472453063 0.45403842627053737 1.0 ['ENST00000592045.5_1_18:53717369-53763461:+|nuORF', 'ENST00000589450.5_1_18:53745418-53763461:+|nuORF', 'ENST00000588139.1_1_18:53755736-53763461:+|nuORF'] 83581 21525 PVAPCKKL True PC9_epitope_Rep4 854.5047948689399 854.50368993586 90.976 2 -1.9894014599357708 0.45403842627053737 1.0 ['nc|ENSG00000198003|A5D8V7-2|ODAD3'] 19088 7222 ELGERLLQ True H1975_Epitope_Rep1 956.5290950404799 956.52798993586 32.79 2 -1.9894501149853057 0.45403842627053737 1.0 ['nc|ENSG00000140691|Q96C12-3|ARMC5', 'nc|ENSG00000140691|Q96C12-2|ARMC5', 'ENSG00000140691|ENST00000268314|ARMC5'] 92310 24989 RLLPRPGPYL True PC9_epitope_Rep5 1180.7080624619598 1180.7069699358601 101.29 2 -1.9894773867740143 0.45403842627053737 1.0 ['nc|ENSG00000010310|P48546-2|GIPR', 'nc|ENSG00000010310|P48546-3|GIPR', 'ENSG00000010310|ENST00000590918|GIPR'] 80527 9616 PGPHGPNG True PC9_epitope_Rep3 731.33508669155 731.33453496793 41.938 1 -1.989684271132915 0.45403842627053737 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 81443 18875 PLFFLKWR True NCI_RA007_Epitope_Rep5 1105.6436713002497 1105.6425699358601 79.447 2 -1.9898265321629267 0.45403842627053737 1.0 ['ENST00000369063.7_1_6:107077156-107077285:-|nuORF'] 61764 25571 LLAKPKLDP True PC9_epitope_Rep3 993.6222671493299 993.6211699358599 103.85 2 -1.9900157362485966 0.45403842627053737 1.0 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD'] 122956 21616 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 90.236 2 -1.990061661030702 0.45403842627053737 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 101249 10090 SLHSQPPKTR True NCI_RA007_Epitope_Rep2 1149.6254550368099 1149.6243499358602 43.838 2 -1.990268611863508 0.45403842627053737 1.0 ['FAM47A|p.H639Qfs*2|1|0.46|ENSG00000185448|chrX:34130362-34130363|-/T|frameshift_variant', 'ENSG00000185448|ENST00000346193|FAM47A'] 127218 17836 VLVTRILT True PC9_epitope_Rep4 913.5960524014899 913.59494993586 76.642 2 -1.990346657568019 0.45403842627053737 1.0 ['ENST00000556553.5_1_14:88851807-88857770:+|nuORF'] 90161 20759 REDGGHGG True PC9_epitope_Rep5 783.32597855983 783.32543496793 84.901 1 -1.9903702047536298 0.45403842627053737 1.0 ['ENST00000421814.6_1_5:162932622-162940637:+|nuORF'] 39597 24169 HLKLGARFR True PC9_epitope_Rep4 1096.6617809758798 1096.66068993586 101.44 2 -1.9904104255369117 0.45403842627053737 1.0 ['ENST00000389262.8_1_22:19048277-19109719:-|nuORF'] 82063 21487 PMADKPGN True H1975_Epitope_Rep2 828.37998827864 828.37888993586 88.902 2 -1.9904114375710906 0.45403842627053737 1.0 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 60186 4749 LGPGTEDAVR True H1975_Epitope_Rep3 1013.5141732523299 1013.51306993586 23.393 2 -1.9905717981308033 0.4540443159507217 1.0 ['ENST00000357520.8_1_7:93633524-93633626:-|nuORF'] 126451 10510 VLLAAEPLDV True H1975_Epitope_Rep1 1038.5961119711399 1038.5950099358602 45.379 2 -1.9908416802056499 0.45406198422886485 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 98584 13860 SFRWSLALSP True PC9_epitope_Rep6 1162.6134933707797 1162.6123899358602 65.134 2 -1.9909355154225368 0.45406198422886485 1.0 ['ENST00000477173.3_1_11:35006185-35041800:+|nuORF'] 81267 23176 PKTKLLCKHL True PC9_epitope_Rep2 1179.71618461751 1179.71508993586 94.631 2 -1.990937961455544 0.45406198422886485 1.0 ['ENST00000519304.1_2_8:133771146-133772790:-|nuORF', 'ENST00000519187.5_2_8:133771681-133772790:-|nuORF', 'ENST00000519016.5_2_8:133771146-133772850:-|nuORF'] 122945 23366 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 101.44 2 -1.9910191156655648 0.45406787340078963 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 112807 24585 TLIGDDKNKK True PC9_epitope_Rep3 1130.62953735774 1130.62844993586 99.929 2 -1.9910767147325323 0.45407965136347944 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'DDX60L|p.A1521Pfs*5|1|0.56|ENSG00000181381|chr4:168375449-168375449|C/-|frameshift_variant'] 95635 23705 RYCIQTKHV True NCI_RA007_Epitope_Rep3 1146.59679776082 1146.59515490379 102.77 3 -1.991092070170403 0.45407965136347944 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 33378 23916 GLAAFPAY True NCI_RA007_Epitope_Rep2 808.4119400299198 808.41139496793 100.4 1 -1.9914113186148188 0.4540963270589504 1.0 ['ENSG00000137414|ENST00000259963|FAM8A1'] 86216 16215 QIKKKIEKALY True H1975_Epitope_Rep1 1360.8442215815999 1360.8431299358601 67.719 2 -1.9916306415234954 0.4541139923199724 1.0 ['ENSG00000198092|ENST00000356291|TMPRSS11F'] 562 4497 AAQNPKREI True NCI_RA007_Epitope_Rep3 1025.5617921510898 1025.5606899358602 24.526 2 -1.9916344903007694 0.4541139923199724 1.0 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3'] 72590 9438 MLRSALKI True NCI_RA007_Epitope_Rep5 930.5684577546599 930.56736993586 42.942 2 -1.991660043638161 0.4541139923199724 1.0 ['ENST00000274030.10_1_4:120169963-120177431:+|nuORF'] 103448 7442 SPPTKSKL True PC9_epitope_Rep5 856.50181766348 856.50072993586 33.58 2 -1.9918593351437515 0.45411498220256713 1.0 ['nc|ENSG00000157927|Q96JH8-1|RADIL', 'ENSG00000157927|ENST00000399583|RADIL'] 31695 16053 GEFWAGSVY True PC9_epitope_Rep1 1014.4446967101799 1014.44358993586 66.561 2 -1.9918615246247109 0.45411498220256713 1.0 ['ENSG00000125879|ENST00000246081|OTOR'] 8491 14139 ATRWAPTPP True PC9_epitope_Rep2 995.5188647099499 995.51776993586 59.657 2 -1.9921095150769754 0.45412482878374444 1.0 ['ENST00000301459.4_1_11:63683878-63684181:-|nuORF'] 87516 13926 QQHSGGSS True NCI_RA007_Epitope_Rep3 786.32564420666 786.32454993586 62.09 2 -1.9921600361361207 0.45412482878374444 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4'] 123119 22593 VGKLRLREV True H1975_Epitope_Rep2 1068.6767623336798 1068.67566993586 93.341 2 -1.992169083841447 0.45412482878374444 1.0 ['ENST00000586768.1_1_16:4574125-4574218:-|nuORF'] 97940 7019 SENLASPSEY True H1975_Epitope_Rep3 1095.47203365683 1095.47092993586 31.961 2 -1.9922849222895886 0.45412482878374444 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98', 'STIM1-NUP98|1|fusion'] 31158 5634 GAWAHGPR True PC9_epitope_Rep5 850.4198193750199 850.41872993586 26.671 2 -1.9923889733601357 0.45412482878374444 1.0 ['FBXO41|p.L358Gfs*153|1|0.64|ENSG00000163013|chr2:73266501-73266516|CACCTCCACGGCCCAG/-|frameshift_variant'] 124709 20947 VHAAAAAA True H1975_Epitope_Rep2 680.3605731634 680.36002496793 86.718 1 -1.9924744538066201 0.45412482878374444 1.0 ['ENSG00000135547|ENST00000368364|HEY2'] 34216 15364 GNKVTGTI True NCI_RA007_Epitope_Rep5 788.43921740692 788.43812993586 65.805 2 -1.9924909699487183 0.45412482878374444 1.0 ['ENSG00000081026|ENST00000307546|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-1|MAGI3'] 129069 25706 VQPGKKNP True PC9_epitope_Rep1 866.4974009893799 866.49630993586 103.92 2 -1.9926292932223557 0.45412482878374444 1.0 ['ENSG00000138615|ENST00000261883|CILP'] 74578 3126 NGEDRQDSRR True PC9_epitope_Rep4 1231.56537396139 1231.56373490379 17.847 3 -1.9926979848061153 0.45412482878374444 1.0 ['ENST00000487698.5_2_2:198288691-198299763:-|nuORF'] 45237 11244 IPTLSSFNLFS True H1975_Epitope_Rep2 1224.63903941228 1224.6379499358602 48.294 2 -1.9929099338745104 0.4541326948794271 1.0 ['ENSG00000179630|ENST00000325686|LACC1'] 55734 5764 LALPPGKM True PC9_epitope_Rep1 825.47824576793 825.47714993586 26.988 2 -1.9930782714106632 0.4541326948794271 1.0 ['ENST00000245414.8_1_5:131819408-131819492:-|nuORF'] 52460 21702 KKSSPSTG True PC9_epitope_Rep4 790.41848196234 790.41738993586 91.679 2 -1.993188280081137 0.4541326948794271 1.0 ['ENSG00000114331|ENST00000326793|ACAP2'] 32999 10845 GIGGSHWPV True H1975_Epitope_Rep3 908.4504507969599 908.44990496793 46.797 1 -1.9932047686658236 0.4541326948794271 1.0 ['ENSG00000188784|ENST00000375116|PLA2G2E'] 136480 23555 WVPPPAEN True H1975_Epitope_Rep3 908.43921740692 908.43812993586 98.281 2 -1.9932085262943493 0.4541326948794271 1.0 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4'] 80257 5205 PGAVSAWLW True H1975_Epitope_Rep3 985.5021520166499 985.50104993586 25.111 2 -1.9933672246133332 0.4541346734535415 1.0 ['ENST00000445836.5_2_22:21057761-21058775:+|nuORF', 'nc|ENSG00000206140|A6NGB0-1|TMEM191C', 'ENSG00000206140|ENST00000536718|TMEM191C', 'ENSG00000278558|ENST00000612978|TMEM191B'] 13474 17344 DNHRCVGH True NCI_RA007_Epitope_Rep5 936.3984323074399 936.39732993586 73.49 2 -1.9934889422861877 0.4541346734535415 1.0 ['MUC16|p.L5286Ffs*116|1|0.22|ENSG00000181143|chr19:8960912-8960913|-/A|frameshift_variant'] 124044 3559 VGSHRYDMFKD True NCI_RA007_Epitope_Rep4 1353.6135700237699 1353.61192490379 19.708 3 -1.993509057912042 0.4541346734535415 1.0 ['ENSG00000093167|ENST00000336686|LRRFIP2'] 30524 4734 GAGLPVRF True PC9_epitope_Rep6 815.46537258511 815.46426993586 25.624 2 -1.9935978465873878 0.4541346734535415 1.0 ['PTPRG|p.G141V|1|0.26|ENSG00000144724|chr3:62003400-62003400|G/T|missense_variant'] 104389 24861 SQKPSVLLTLR True NCI_RA007_Epitope_Rep1 1240.7503211967598 1240.74922993586 102.91 2 -1.9939460853908895 0.45420625249377233 1.0 ['nc|ENSG00000124299|P12955-3|PEPD', 'ENST00000570572.1_1_17:53638398-53638659:-|nuORF', 'ENST00000590408.1_1_19:33953899-34001945:-|nuORF', 'nc|ENSG00000124299|P12955-2|PEPD', 'ENSG00000124299|ENST00000244137|PEPD'] 21281 18722 ERDVELFF True PC9_epitope_Rep6 1053.51311062317 1053.51257496793 84.656 1 -1.9939503014432405 0.45420625249377233 1.0 ['SRSF4|p.R20L|1|0.89|ENSG00000116350|chr1:29181694-29181694|C/A|missense_variant'] 95841 25219 RYIYPKLKMAL True PC9_epitope_Rep2 1394.8108132783398 1394.8097099358602 102.67 2 -1.9943777404139313 0.45420625249377233 1.0 ['ENST00000487532.5_1_1:45424435-45452248:-|nuORF'] 122121 19528 VGAFLKNA True H1975_Epitope_Rep3 818.46503823194 818.46394993586 81.829 2 -1.9946292710659235 0.45421213820471895 1.0 ['ENSG00000170906|ENST00000485876|NDUFA3'] 26065 25236 FGKVKVGK True H1975_Epitope_Rep2 861.5436229058098 861.54252993586 103.67 2 -1.9947493343813347 0.4542395910840801 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 47413 6166 IVLKKVKYRL True PC9_epitope_Rep3 1258.84891303922 1258.8478099358601 28.761 2 -1.995392544450912 0.45428371165148 1.0 ['PICK1|p.H123Y|1|0.14|ENSG00000100151|chr22:38069050-38069050|C/T|missense_variant'] 19251 23678 ELKDKKLFLKR True PC9_epitope_Rep5 1416.88166971948 1416.8805699358602 96.056 2 -1.9954224280152586 0.45428371165148 1.0 ['nc|ENSG00000115085|P43403-3|ZAP70', 'ENSG00000115085|ENST00000264972|ZAP70', 'ENST00000487283.5_1_2:98350954-98351329:+|nuORF', 'nc|ENSG00000115085|P43403-2|ZAP70'] 10958 5501 DAHRAGAP True NCI_RA007_Epitope_Rep2 793.3830995131299 793.38200993586 26.016 2 -1.9957472886096983 0.45428469758564544 1.0 ['nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L', 'nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L', 'ENSG00000074964|ENST00000361221|ARHGEF10L', 'nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L'] 122239 19873 VGAQKIPG True PC9_epitope_Rep3 768.4493881677998 768.44828993586 81.679 2 -1.995767389342024 0.45428469758564544 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2'] 20492 24556 EPLPLAYA True PC9_epitope_Rep5 872.4643695255999 872.46326993586 99.566 2 -1.995869968331061 0.4542905820699174 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 92667 22591 RNNPEPWNKL True PC9_epitope_Rep4 1266.64691875738 1266.64528490379 95.128 3 -1.9961377024818787 0.45429942314949595 1.0 ['ENST00000486007.1_1_7:10977674-10979684:-|nuORF', 'ENSG00000189043|ENST00000339600|NDUFA4'] 3573 7040 AGLYFLMWF True PC9_epitope_Rep3 1146.55722436462 1146.55558490379 32.09 3 -1.996260993307047 0.45429942314949595 1.0 ['ENST00000411991.5_1_2:103340290-103347510:-|nuORF'] 115386 21820 TRKMRMRWKRR True PC9_epitope_Rep3 1603.9140070739497 1603.9129099358602 89.23 2 -1.9962659540651537 0.45429942314949595 1.0 ['GPIHBP1|p.A3Rfs*77|1|0.18|ENSG00000277494|chr8:143213273-143213273|G/-|frameshift_variant'] 57706 11044 LEEKQRSL True PC9_epitope_Rep2 1001.5505587610498 1001.54946993586 47.799 2 -1.9966129161541901 0.45429942314949595 1.0 ['ENSG00000196553|ENST00000636229|CCDC196'] 92481 18308 RLVRMKVF True NCI_RA007_Epitope_Rep5 1047.6375403739899 1047.6364499358601 77.223 2 -1.9966399109955175 0.45429942314949595 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566292.5_1_16:58035387-58044017:+|nuORF', 'ENST00000565662.5_1_16:58035387-58051252:+|nuORF', 'nc|ENSG00000103005|Q9BQ65-3|USB1'] 130183 5837 VSEITMYIL True H1975_Epitope_Rep3 1067.55728393427 1067.5561899358602 27.466 2 -1.996658447598548 0.45429942314949595 1.0 ['SCN3B|p.M161T|1|0.38|ENSG00000166257|chr11:123638288-123638288|A/G|missense_variant'] 1627 24463 AEFLVKSK True H1975_Epitope_Rep3 920.53311779176 920.53202993586 101.83 2 -1.9967171631718084 0.45429942314949595 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 72553 17157 MLLLKSLW True NCI_RA007_Epitope_Rep5 1002.59360987334 1002.5930749679301 72.765 1 -1.9967834109812772 0.4543053069674164 1.0 ['ENST00000445193.7_2_3:58303863-58303956:+|nuORF'] 20573 18835 EPRQRRLLL True NCI_RA007_Epitope_Rep4 1179.7200241279897 1179.71947496793 81.473 1 -1.9971561289445239 0.4543386380299306 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 83405 24722 PTLCLVAL True NCI_RA007_Epitope_Rep5 828.4779114147599 828.47680993586 102.58 2 -1.9972709197697587 0.4543386380299306 1.0 ['ENST00000377298.8_1_1:9790356-9790569:-|nuORF'] 25937 24367 FFSTHGTG True H1975_Epitope_Rep3 852.37661715036 852.37552993586 101.45 2 -1.9974132985426585 0.454355303022135 1.0 ['ENST00000313732.8_1_16:85008678-85008795:-|nuORF'] 95253 21039 RVLWVRRER True PC9_epitope_Rep6 1268.75780661904 1268.75670993586 93.747 2 -1.9977341913297337 0.45435628726374916 1.0 ['ENST00000503969.5_1_5:76414257-76443501:+|nuORF'] 110399 6919 TEVPSSPSE True NCI_RA007_Epitope_Rep5 931.41345615155 931.4129049679301 33.299 1 -1.9977926633971126 0.45435628726374916 1.0 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 128996 25495 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 103.32 2 -1.9978901047677906 0.45435825561964316 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 103061 24802 SPGGCARR True PC9_epitope_Rep1 802.38680499458 802.38570993586 100.29 2 -1.9980127785579134 0.45435825561964316 1.0 ['ENST00000482212.1_3_1:33283340-33283436:+|nuORF'] 101118 7022 SLGLPPSSAV True NCI_RA007_Epitope_Rep4 926.50729696674 926.50618993586 33.637 2 -1.9981559266619502 0.45435825561964316 1.0 ['TCERG1L|p.T131A|1|0.1|ENSG00000176769|chr10:131309251-131309251|T/C|missense_variant'] 94649 24615 RRWNGRRLR True PC9_epitope_Rep4 1268.7438878903997 1268.7427899358602 103.17 2 -1.9982375350672168 0.45435825561964316 1.0 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1'] 62298 6564 LLFYESDW True PC9_epitope_Rep5 1071.4913125494297 1071.49020993586 30.219 2 -1.998426305365913 0.45438570011643453 1.0 ['ENST00000517439.1_1_8:74893396-74893462:+|nuORF'] 95073 16970 RTWLPARR True NCI_RA007_Epitope_Rep3 1054.6148307834599 1054.6137299358602 74.615 2 -1.9985387609873795 0.45439158230645665 1.0 ['ENST00000597578.1_1_16:86524111-86542471:-|nuORF', 'ENST00000599749.5_1_16:86524596-86542567:-|nuORF'] 44999 13246 IPCRGHGG True H1975_Epitope_Rep3 795.3809913381499 795.3804449679301 56.206 1 -1.9985943140166291 0.4543925656809582 1.0 ['ENSG00000137270|ENST00000259803|GCM1'] 41807 21962 IASYKVILC True PC9_epitope_Rep4 1008.5677890483199 1008.56668993586 92.69 2 -1.9986180627069825 0.4543925656809582 1.0 ['OR4C6|p.T217K|1|0.08|ENSG00000181903|chr11:55665816-55665816|C/A|missense_variant'] 92482 18485 RLVRMKVF True NCI_RA007_Epitope_Rep5 1047.6375403739899 1047.6364499358601 77.928 2 -1.9986589140186213 0.45439844760672704 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566292.5_1_16:58035387-58044017:+|nuORF', 'ENST00000565662.5_1_16:58035387-58051252:+|nuORF', 'nc|ENSG00000103005|Q9BQ65-3|USB1'] 10638 23695 CPHCQVLQ True PC9_epitope_Rep4 926.4102428611 926.40914993586 99.495 2 -1.9989253027966896 0.45441510979829886 1.0 ['nc|ENSG00000154914|Q70EL4-4|USP43', 'ENSG00000154914|ENST00000285199|USP43', 'nc|ENSG00000154914|Q70EL4-2|USP43', 'nc|ENSG00000154914|Q70EL4-3|USP43'] 122589 23359 VGFFILLRIF True PC9_epitope_Rep1 1223.74305098835 1223.7424749679299 94.636 1 -1.9994226627962752 0.4544641124598435 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12'] 136106 8470 WRLRHFVSWLW True H1975_Epitope_Rep3 1584.84662162344 1584.8455299358602 37.565 2 -1.9997018179419037 0.454513114064875 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 62791 22788 LLLTGHDL True H1975_Epitope_Rep2 880.50181766348 880.50072993586 94.094 2 -1.999807518592833 0.45451409475556515 1.0 ['ENST00000397387.2_1_13:101408869-101409262:-|nuORF'] 137337 6717 YDLAAATV True H1975_Epitope_Rep3 822.41233395274 822.41122993586 30.793 2 -1.999877915870588 0.45451409475556515 1.0 ['nc|ENSG00000136826|O43474-4|KLF4', 'ENST00000497048.5_1_9:110248034-110250560:-|nuORF', 'ENSG00000136826|ENST00000374672|KLF4', 'nc|ENSG00000136826|O43474|KLF4', 'ENST00000356805.8_1_2:54896150-54896312:+|nuORF'] 129402 11506 VRELYRAWYRE True H1975_Epitope_Rep1 1539.7946456202296 1539.79354993586 49.242 2 -1.9999767339667267 0.4545199749908372 1.0 ['ENSG00000184983|ENST00000498737|NDUFA6'] 6055 22815 APLLGRLQ True PC9_epitope_Rep1 866.5337864981 866.53268993586 92.571 2 -2.00014803963581 0.45456897388079814 1.0 ['ENST00000585203.6_1_17:7126346-7127336:+|nuORF'] 110066 11559 TELLLIGAPL True NCI_RA007_Epitope_Rep1 1038.6324974798597 1038.6314099358601 48.931 2 -2.0002465111522993 0.4545719089498189 1.0 ['nc|ENSG00000005844|P20701-3|ITGAL', 'ENSG00000005844|ENST00000356798|ITGAL', 'nc|ENSG00000005844|P20701-2|ITGAL'] 21637 9058 ERRRSWSYRPW True NCI_RA007_Epitope_Rep1 1577.7963769557298 1577.79472490379 39.238 3 -2.0002543378140896 0.4545719089498189 1.0 ['ENSG00000168263|ENST00000382082|KCNV2'] 122944 21084 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 91.416 2 -2.0003199350202805 0.4545719089498189 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 91393 15949 RHGRASAT True NCI_RA007_Epitope_Rep4 854.44709675202 854.44598993586 69.218 2 -2.00038185922037 0.4545719089498189 1.0 ['nc|ENSG00000125779|Q9BZ23-3|PANK2', 'ENSG00000125779|ENST00000610179|PANK2', 'nc|ENSG00000125779|Q9BZ23|PANK2'] 91327 18230 RGRRILEV True PC9_epitope_Rep2 997.6144964302898 997.61338993586 75.439 2 -2.000411303407402 0.4545719089498189 1.0 ['AluSz_dup11808|chr2:85658498-85658822:-|11.583715912815824|0.0905077193686202|7.0|530.0|8|3|sense'] 30391 15487 GAEAKAKA True NCI_RA007_Epitope_Rep2 744.4130026590799 744.4124549679301 64.945 1 -2.0006268431503944 0.4545719089498189 1.0 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 13771 8180 DQGAQIYAR True PC9_epitope_Rep1 1020.4988575413598 1020.49827496793 36.296 1 -2.000844940651608 0.4545719089498189 1.0 ['nc|ENSG00000049239|O95479-2|H6PD', 'ENSG00000049239|ENST00000377403|H6PD'] 56131 14293 LAVGTPRGAL True PC9_epitope_Rep6 953.5658149023699 953.56470993586 66.873 2 -2.0010139657195434 0.4545719089498189 1.0 ['ENST00000586689.5_2_17:74733959-74734425:+|nuORF', 'ENST00000588460.5_1_17:74733800-74734238:+|nuORF'] 63311 20848 LLSTWQRL True PC9_epitope_Rep4 1015.5814649665099 1015.58036993586 88.345 2 -2.001088679932224 0.4545719089498189 1.0 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF'] 57085 4732 LDSLPSAP True NCI_RA007_Epitope_Rep2 798.41233395274 798.41122993586 23.036 2 -2.001140142874775 0.4545719089498189 1.0 ['ENST00000445935.5_2_21:47737957-47742843:-|nuORF'] 32331 22118 GFGFITFT True PC9_epitope_Rep6 888.43815477776 888.43704993586 98.019 2 -2.00128285822642 0.4545719089498189 1.0 ['ENSG00000102317|ENST00000376759|RBM3', 'ENST00000466764.5_1_X:48433568-48434262:+|nuORF', 'ENST00000491240.5_1_X:48433911-48434199:+|nuORF', 'ENST00000488216.5_1_X:48433568-48434199:+|nuORF'] 101875 21629 SLPPGAVP True PC9_epitope_Rep1 736.41194002992 736.41139496793 88.022 1 -2.0013892986770134 0.4545719089498189 1.0 ['ENST00000482399.5_1_6:33218678-33219376:-|nuORF'] 124387 14838 VGVAPAPL True NCI_RA007_Epitope_Rep5 722.4326754745 722.43212496793 63.745 1 -2.00158058069746 0.4545719089498189 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 57115 7570 LDTAGQEEFGA True H1975_Epitope_Rep2 1136.49858275784 1136.4974899358601 34.07 2 -2.001591900939472 0.4545719089498189 1.0 ['ENSG00000126458|ENST00000246792|RRAS', 'ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2'] 38020 21240 HAPALHLT True NCI_RA007_Epitope_Rep5 858.4711862415401 858.47008993586 88.74 2 -2.0017872486553125 0.4545719089498189 1.0 ['ENST00000308406.9_1_17:19284741-19284873:+|nuORF'] 127986 17587 VPHLRDTK True NCI_RA007_Epitope_Rep1 964.54541381096 964.54486496793 72.545 1 -2.001788510447174 0.4545719089498189 1.0 ['ITGA5|p.E895Kfs*15|1|0.2|ENSG00000161638|chr12:54399908-54399908|C/-|frameshift_variant', 'ENSG00000161638|ENST00000293379|ITGA5', 'ENST00000552583.1_1_12:54795558-54795958:-|nuORF', 'ENST00000552564.5_1_12:54794620-54797174:-|nuORF'] 12823 12581 DLGDGVPVKS True PC9_epitope_Rep2 985.50802524273 985.50692993586 53.699 2 -2.001791342654174 0.4545719089498189 1.0 ['nc|ENSG00000131196|O95644-8|NFATC1', 'nc|ENSG00000131196|O95644-11|NFATC1', 'nc|ENSG00000131196|O95644-3|NFATC1', 'nc|ENSG00000131196|O95644-10|NFATC1', 'nc|ENSG00000131196|O95644-2|NFATC1', 'nc|ENSG00000131196|O95644-5|NFATC1', 'nc|ENSG00000131196|O95644-4|NFATC1', 'nc|ENSG00000131196|O95644-6|NFATC1', 'ENSG00000131196|ENST00000427363|NFATC1'] 124390 15281 VGVAPAPL True NCI_RA007_Epitope_Rep5 722.4326754745 722.43212496793 65.472 1 -2.0020839489849593 0.4545728881512297 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 84916 14865 QEDQERRR True PC9_epitope_Rep5 1115.54318196483 1115.54208993586 62.181 2 -2.002130183191125 0.4545728881512297 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 130722 6108 VSVPTHAEA True PC9_epitope_Rep5 909.4555957470499 909.45448993586 28.481 2 -2.0022256250351593 0.45457876642202033 1.0 ['VCAN|p.P107A|1|0.69|ENSG00000038427|chr5:83490346-83490346|C/G|missense_variant'] 3432 8084 AGKAEEREI True PC9_epitope_Rep2 1001.5141732523299 1001.51306993586 36.453 2 -2.002438498439013 0.4545797454439643 1.0 ['ENST00000328668.7_1_5:149682265-149682355:-|nuORF'] 86754 25456 QLLKKFLKN True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 102.9 2 -2.002606409458708 0.4545797454439643 1.0 ['ENST00000512078.5_1_5:59893582-59984814:-|nuORF', 'nc|ENSG00000035499|Q8WUY9-2|DEPDC1B', 'ENSG00000035499|ENST00000265036|DEPDC1B'] 23905 5883 EYKYDVQRAQ True H1975_Epitope_Rep2 1298.6255146064598 1298.62440993586 27.614 2 -2.0027722999743025 0.45459737908440384 1.0 ['LIG1|p.G571V|1|0.55|ENSG00000105486|chr19:48132995-48132995|C/A|missense_variant'] 47506 9589 IVRAYQYTTL True NCI_RA007_Epitope_Rep2 1226.66592286646 1226.66482993586 41.914 2 -2.002788784135375 0.45459737908440384 1.0 ['nc|ENSG00000110660|Q8IXU6-3|SLC35F2', 'nc|ENSG00000110660|Q8IXU6-2|SLC35F2', 'ENSG00000110660|ENST00000525815|SLC35F2'] 100553 17001 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 70.644 2 -2.002918886382889 0.45459737908440384 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 53111 11965 KPSSTRGGVL True PC9_epitope_Rep2 1000.5665431783599 1000.56544993586 51.343 2 -2.0029762990807187 0.45460325671117435 1.0 ['ENSG00000204291|ENST00000375001|COL15A1', 'ENST00000471477.1_1_9:101706343-101748400:+|nuORF'] 116397 24322 TTILHLRQ True H1975_Epitope_Rep2 980.5767139392401 980.57560993586 100.08 2 -2.003090680895554 0.4546042351419796 1.0 ['ENST00000495037.1_1_3:66430689-66454678:-|nuORF', 'ENST00000496559.6_1_3:66430689-66456253:-|nuORF', 'ENSG00000144749|ENST00000273261|LRIG1', 'nc|ENSG00000144749|Q96JA1-2|LRIG1'] 137939 15808 YFEGIHLD True NCI_RA007_Epitope_Rep5 992.46034677432 992.45924993586 67.524 2 -2.003096018902393 0.4546042351419796 1.0 ['ENSG00000176208|ENST00000321990|ATAD5'] 142778 24776 YYRLLITHL True PC9_epitope_Rep2 1190.68117900778 1190.68008993586 100.98 2 -2.0031281133714383 0.45460521353060984 1.0 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 53036 24425 KPLPNRKG True H1975_Epitope_Rep1 908.55558457184 908.55448993586 101.26 2 -2.0033066472750254 0.45460521353060984 1.0 ['ENSG00000229924|ENST00000512047|FAM90A26'] 94067 21260 RRLIKEHTK True PC9_epitope_Rep6 1179.72002412799 1179.71836490379 94.629 3 -2.0038365427336666 0.45461696785525707 1.0 ['ENST00000505150.5_1_4:169411574-169413987:-|nuORF'] 120516 14377 VEFIPSLLYFG True NCI_RA007_Epitope_Rep2 1283.6801759482698 1283.67906993586 60.589 2 -2.0038900253982805 0.45461696785525707 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4', 'ENST00000479591.1_1_20:30749036-30753244:+|nuORF'] 131509 4719 VTKKVVASP True NCI_RA007_Epitope_Rep4 927.5753169569099 927.57420993586 24.582 2 -2.0040755211591996 0.45462480065514416 1.0 ['nc|ENSG00000105549|Q9P2T0-2|SPMAP2', 'ENSG00000105549|ENST00000342640|THEG'] 44275 16011 ILAVPVRTDA True PC9_epitope_Rep2 1053.6182443980501 1053.6171499358602 66.841 2 -2.004138112024951 0.45462480065514416 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2'] 89625 7492 QYRRVIGMFYK True PC9_epitope_Rep6 1459.7758247519498 1459.77418490379 38.066 3 -2.0042533972040086 0.45462480065514416 1.0 ['ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 81166 22971 PKGKMIPVLH True PC9_epitope_Rep3 1118.6634207686598 1118.66232993586 93.623 2 -2.0044084447447013 0.45462480065514416 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'PPP1R17|p.A128Cfs*19|1|0.39|ENSG00000106341|chr7:31697107-31697108|-/T|frameshift_variant', 'nc|ENSG00000106341|O96001-2|PPP1R17'] 72089 17655 MEYYDPHTNKW True PC9_epitope_Rep1 1482.6238003542999 1482.62270993586 72.704 2 -2.004411207086053 0.45462480065514416 1.0 ['ENSG00000150361|ENST00000377844|KLHL1'] 28437 18788 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 79.105 2 -2.0045062725076916 0.4546257785057001 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 37194 15825 GVQVLTQE True NCI_RA007_Epitope_Rep5 872.4603467743199 872.4597949679301 67.592 1 -2.004522920567365 0.4546257785057001 1.0 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 77402 26400 NSGHKVLL True PC9_epitope_Rep3 866.4974009893799 866.49630993586 107.86 2 -2.004738529908574 0.45464830618050167 1.0 ['ENST00000510722.1_1_5:52361776-52362970:+|nuORF'] 16248 22997 EEESGAPG True NCI_RA007_Epitope_Rep4 774.3031774265799 774.30208993586 99.874 2 -2.0047715270351145 0.45464830618050167 1.0 ['ENSG00000204560|ENST00000376442|DHX16', 'nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 43761 24077 IHKLMRWIR True PC9_epitope_Rep5 1251.73865139759 1251.7375499358602 97.595 2 -2.004864226710833 0.4546541822452564 1.0 ['ENSG00000164077|ENST00000296473|MON1A', 'nc|ENSG00000164077|Q86VX9|MON1A', 'ENST00000486107.5_1_3:49946449-49946602:-|nuORF', 'nc|ENSG00000164077|Q86VX9-2|MON1A', 'nc|ENSG00000164077|Q86VX9-4|MON1A'] 63305 8188 LLSTTRSIERA True NCI_RA007_Epitope_Rep1 1245.7040992803302 1245.70300993586 35.845 2 -2.0050682148615895 0.4546600581833854 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 52427 18939 KKRRHLTPT True H1975_Epitope_Rep3 1135.69380938015 1135.6927099358602 79.425 2 -2.0051953469393404 0.4546610352109641 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 12857 13826 DLHFLNLEGS True PC9_epitope_Rep3 1143.55603806431 1143.5549499358601 58.263 2 -2.0052238268266303 0.4546610352109641 1.0 ['nc|ENSG00000138658|Q86YA3-4|ZGRF1'] 13639 11646 DPLTNLMYVLW True PC9_epitope_Rep4 1363.68460970571 1363.68350993586 52.555 2 -2.005339952276398 0.45466201219643587 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1', 'nc|ENSG00000070729|Q14028-2|CNGB1'] 100556 17500 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 72.57 2 -2.0053630493552634 0.45466201219643587 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 48567 2143 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 11.094 3 -2.005656249941461 0.45468943597478856 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 83138 5670 PSQQHAPV True PC9_epitope_Rep5 862.4297153523798 862.42860993586 26.807 2 -2.0057923171835923 0.45469531115324946 1.0 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 69371 15380 LTVTSASW True PC9_epitope_Rep2 863.43888305375 863.43833496793 64.441 1 -2.005851648180347 0.4547011862051133 1.0 ['ENST00000380956.8_1_6:407613-407766:+|nuORF'] 28083 8206 FQTKIRKWMYF True NCI_RA007_Epitope_Rep1 1546.8118759074998 1546.8107699358602 35.918 2 -2.006375012120492 0.45470803706097823 1.0 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'nc|ENSG00000166348|Q70EL1-4|USP54'] 11506 21579 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 89.28 3 -2.0064461302132512 0.45470803706097823 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 81168 23176 PKGKMIPVLH True PC9_epitope_Rep4 1118.6634207686598 1118.66232993586 97.376 2 -2.0065783059338584 0.45470803706097823 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'PPP1R17|p.A128Cfs*19|1|0.39|ENSG00000106341|chr7:31697107-31697108|-/T|frameshift_variant', 'nc|ENSG00000106341|O96001-2|PPP1R17'] 60721 15734 LHRAAELLAWA True NCI_RA007_Epitope_Rep2 1249.69314067381 1249.69204993586 65.92 2 -2.006869514847165 0.4547158631834096 1.0 ['ENSG00000183479|ENST00000370231|TREX2', 'nc|ENSG00000183479|Q9BQ50-1|TREX2'] 55092 22160 LAAARERL True PC9_epitope_Rep5 898.5348491272599 898.53374993586 90.276 2 -2.0069380109638333 0.4547158631834096 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'FAM184A|p.K1048Vfs*7|1|0.04|ENSG00000111879|chr6:118961960-118961961|-/TTTTAAC|frameshift_variant', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A', 'FAM184A|p.K640*|1|0.36|ENSG00000111879|chr6:119003520-119003521|-/A|frameshift_variant'] 131599 11526 VTLLVLDG True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 50.986 2 -2.0070197403794854 0.4547158631834096 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000174827|Q5T2W1-2|PDZK1'] 27692 8646 FPLALAGP True H1975_Epitope_Rep1 784.4483255386399 784.44722993586 38.187 2 -2.0070800969309674 0.4547158631834096 1.0 ['ENSG00000169083|ENST00000374690|AR', 'nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF'] 21963 4507 ESEFYLAMN True NCI_RA007_Epitope_Rep1 1102.4641118254199 1102.46300993586 21.634 2 -2.0071490040642885 0.4547158631834096 1.0 ['ENST00000441829.2_9:44302237-44303615:+|nuORF', 'ENSG00000140285|ENST00000267843|FGF7'] 52997 16526 KPGWKKKLRC True H1975_Epitope_Rep2 1242.7383170444198 1242.73666490379 68.79 3 -2.0074397639852224 0.45472173744425054 1.0 ['ENST00000569426.1_1_16:89790014-89799821:+|nuORF', 'ENST00000563541.1_1_16:89789946-89799821:+|nuORF', 'ENST00000561536.5_1_16:89789452-89804651:+|nuORF', 'nc|ENSG00000158805|Q8N554-2|ZNF276', 'ENSG00000158805|ENST00000443381|ZNF276'] 28767 6341 FSSSLPYPNNL True NCI_RA007_Epitope_Rep1 1237.59790287629 1237.5968099358602 28.691 2 -2.0079220350614015 0.4547491570340526 1.0 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000518647.5_1_8:42129618-42174557:+|nuORF', 'ENST00000520201.5_1_8:42129679-42177019:+|nuORF', 'ENST00000342222.6_1_8:42151073-42188494:+|nuORF', 'ENST00000517917.5_1_8:42128977-42177019:+|nuORF'] 34584 26910 GPSYGSQN True PC9_epitope_Rep5 808.3351462612001 808.33404993586 109.95 2 -2.007958825313279 0.4547550308096695 1.0 ['nc|ENSG00000105991|P49639-2|HOXA1', 'nc|ENSG00000105991|P49639-3|HOXA1', 'nc|ENSG00000105991|P49639|HOXA1', 'ENSG00000105991|ENST00000643460|HOXA1'] 15061 17589 DYQKLNSAM True NCI_RA007_Epitope_Rep5 1068.4909952796 1068.4898899358602 74.437 2 -2.008061757238138 0.4547560056016374 1.0 ['ENSG00000173809|ENST00000639142|TDRD12', 'nc|ENSG00000173809|Q587J7|TDRD12', 'nc|ENSG00000173809|Q587J7-2|TDRD12'] 114149 23641 TPKESPHFYRK True PC9_epitope_Rep5 1388.7200836976397 1388.71898993586 95.914 2 -2.0081218456944807 0.4547560056016374 1.0 ['ENSG00000104369|ENST00000342232|JPH1'] 55590 13581 LAHSPGGG True H1975_Epitope_Rep1 694.33983771882 694.3392849679301 57.368 1 -2.0084404154045976 0.4547618791136582 1.0 ['ENST00000441363.1_1_6:73973136-74009049:+|nuORF'] 39220 25009 HIHLILLFR True PC9_epitope_Rep6 1160.7182332228401 1160.7171299358602 111.17 2 -2.0085173244788046 0.45476775249913826 1.0 ['ENST00000382151.6_1_22:32015035-32015164:-|nuORF'] 17206 17414 EGTRWLDYVR True H1975_Epitope_Rep1 1293.64658440421 1293.64548993586 72.458 2 -2.0086212687618668 0.4547746000969462 1.0 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'MTMR11|p.G424Efs*52|1|0.33|ENSG00000014914|chr1:149931279-149931279|C/-|frameshift_variant', 'nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 111918 6627 TIPGHLNS True PC9_epitope_Rep4 837.4344663796501 837.43336993586 32.651 2 -2.0086954138099586 0.4547746000969462 1.0 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1|p.E1255Cfs*5|1|0.04|ENSG00000115414|chr2:215394557-215394561|CTTTC/-|frameshift_variant'] 71566 18712 MCLNLRVLK True NCI_RA007_Epitope_Rep4 1088.61984170452 1088.61874993586 80.954 2 -2.0087044852319713 0.4547746000969462 1.0 ['ENST00000323387.5_10:47380981-47400428:+|nuORF'] 81179 17341 PKGKRGEK True H1975_Epitope_Rep1 898.5348491272598 898.53374993586 72.168 2 -2.008765886726096 0.45479124477573357 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF'] 124389 15105 VGVAPAPL True NCI_RA007_Epitope_Rep5 722.4326754745 722.43212496793 64.768 1 -2.0092255810801576 0.45481762279634275 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 43328 21019 IFWLSFLKSL True PC9_epitope_Rep6 1252.7219811906 1252.7208899358602 93.674 2 -2.0093169675134637 0.45481762279634275 1.0 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.V1032Cfs*64|1|0.19|ENSG00000196730|chr9:87706165-87706165|G/-|frameshift_variant'] 140203 10564 YQVAFRMAYFP True PC9_epitope_Rep3 1391.6696283479096 1391.66852993586 45.581 2 -2.0093223089768735 0.45481762279634275 1.0 ['DISP2|p.L758Cfs*39|1|0.16|ENSG00000140323|chr15:40368383-40368383|C/-|frameshift_variant', 'DISP2|p.D885Mfs*67|1|0.19|ENSG00000140323|chr15:40368761-40368761|C/-|frameshift_variant', 'ENSG00000140323|ENST00000267889|DISP2'] 62422 3294 LLHFHMTFMLF True PC9_epitope_Rep2 1435.71447036535 1435.71283490379 17.925 3 -2.0098449835476138 0.45481762279634275 1.0 ['ENST00000368608.3_1_6:116599413-116599590:-|nuORF'] 49866 4323 KIETEHGT True PC9_epitope_Rep2 913.45051036661 913.44940993586 21.968 2 -2.010102582055748 0.45481762279634275 1.0 ['ENST00000496790.1_1_7:102389906-102395456:+|nuORF', 'ENSG00000222011|ENST00000413034|FAM185A'] 92160 20363 RLETKERELRV True PC9_epitope_Rep4 1427.82086036807 1427.8197699358602 86.471 2 -2.010275427508492 0.45481762279634275 1.0 ['ENSG00000047662|ENST00000265018|FAM184B'] 85683 7420 QGSSPPPP True PC9_epitope_Rep3 765.36571811349 765.36462993586 33.548 2 -2.0102898167111043 0.45481762279634275 1.0 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 121754 5027 VFLYFEDN True PC9_epitope_Rep1 1045.4756624852898 1045.47456993586 24.194 2 -2.010328105996146 0.45481762279634275 1.0 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF', 'ENST00000584912.5_1_17:37006588-37006753:-|nuORF'] 124643 7108 VGWRGTGSGKL True PC9_epitope_Rep4 1116.60399131624 1116.60288993586 34.61 2 -2.0104601476402304 0.45481762279634275 1.0 ['ENST00000370406.7_1_X:149106790-149106904:-|nuORF'] 53975 15920 KVAAARGR True NCI_RA007_Epitope_Rep5 827.5089687325899 827.50786993586 67.963 2 -2.010469268911197 0.45481762279634275 1.0 ['ENST00000565877.5_1_16:89284207-89284655:+|nuORF'] 124672 9772 VGYGAAGL True NCI_RA007_Epitope_Rep4 706.3649898374999 706.36444496793 44.437 1 -2.0104726772594863 0.45481762279634275 1.0 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2', 'TAP2|p.G181Efs*69|1|0.35|ENSG00000204267|chr6:32837603-32837603|C/-|frameshift_variant'] 44367 12274 ILELRAEI True PC9_epitope_Rep2 955.57023157647 955.56912993586 52.521 2 -2.010664708273234 0.45481762279634275 1.0 ['KIF16B|p.R374L|1|0.17|ENSG00000089177|chr20:16504427-16504427|C/A|missense_variant'] 132134 14172 VTVEYRPI True PC9_epitope_Rep4 975.5389314481899 975.53782993586 62.417 2 -2.010833134776521 0.45481762279634275 1.0 ['ENST00000455183.1_1_3:195408438-195412772:+|nuORF', 'ENST00000440850.5_1_3:195690208-195698253:-|nuORF'] 24258 21577 EYSVLSKPV True PC9_epitope_Rep5 1020.5491617787198 1020.54806993586 88.037 2 -2.010859896054161 0.45481762279634275 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 71584 14402 MCTSCLTS True NCI_RA007_Epitope_Rep5 844.3128968886 844.31178993586 62.081 2 -2.0109124921549864 0.45481762279634275 1.0 ['ENSG00000110395|ENST00000264033|CBL'] 3064 7303 AFVGRKGG True NCI_RA007_Epitope_Rep2 790.4449714936999 790.44386993586 33.027 2 -2.01091513993761 0.45481762279634275 1.0 ['ENSG00000085998|ENST00000371984|POMGNT1', 'nc|ENSG00000085998|Q8WZA1-2|POMGNT1'] 92428 25560 RLRETKPLV True NCI_RA007_Epitope_Rep5 1110.6873270173799 1110.6862299358602 105.86 2 -2.0109630557714193 0.45481762279634275 1.0 ['ENST00000489884.5_1_7:150777299-150777671:-|nuORF'] 81125 21578 PKGCLLYK True PC9_epitope_Rep4 920.51535955264 920.5142699358599 91.182 2 -2.0109762839197147 0.45481762279634275 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 41341 21505 HWKGHEHS True H1975_Epitope_Rep2 1016.45766143572 1016.45656993586 88.977 2 -2.0110916328280517 0.45481762279634275 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 59629 19151 LFYQQPPL True PC9_epitope_Rep6 1004.5331177917599 1004.53202993586 86.316 2 -2.0111797550207746 0.45481762279634275 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1'] 56459 7974 LDELPMIY True H1975_Epitope_Rep1 992.48887002128 992.48776993586 35.623 2 -2.0112490927265863 0.45481762279634275 1.0 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 36770 19728 GVKRFFKCP True NCI_RA007_Epitope_Rep4 1080.5902558284 1080.58967496793 85.256 1 -2.011384051903241 0.4548342630683409 1.0 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'ENST00000485659.1_1_10:13240798-13246428:+|nuORF'] 102581 8982 SLWAWVERE True H1975_Epitope_Rep3 1174.5771078620598 1174.5760099358602 39.545 2 -2.011433279573019 0.45484013396655143 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 127111 5078 VLTLDLSQYPD True PC9_epitope_Rep5 1262.6394333351 1262.63779490379 24.557 3 -2.011510712526461 0.4548411066001874 1.0 ['nc|ENSG00000077935|Q8NDV3-2|SMC1B', 'ENSG00000077935|ENST00000357450|SMC1B'] 102972 24456 SPFCSCLL True H1975_Epitope_Rep2 868.38229677776 868.38118993586 100.61 2 -2.011528247489252 0.4548411066001874 1.0 ['ENST00000334801.7_1_11:118768619-118768991:-|nuORF'] 109228 6429 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 29.704 2 -2.0123274179864885 0.45485774590252204 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 121432 12218 VEWDLNRK True NCI_RA007_Epitope_Rep4 1058.55089311422 1058.5497899358602 53.99 2 -2.0126591297322314 0.4548743848464943 1.0 ['ENST00000409580.5_1_2:189157747-189157840:+|nuORF', 'ENST00000359135.7_1_2:189157747-189248499:+|nuORF'] 38553 24744 HETGHVLG True PC9_epitope_Rep2 848.41406528824 848.41296993586 100.86 2 -2.0132343302037703 0.45489980725953205 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.S556Hfs*105|1|0.11|ENSG00000156140|chr4:72313757-72313757|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 132685 24045 VVGSSRSL True H1975_Epitope_Rep3 803.45011644379 803.4495649679301 100.2 1 -2.013290679014395 0.45489980725953205 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 141003 13682 YSISPSFTK True H1975_Epitope_Rep3 1028.51786165044 1028.51727496793 57.921 1 -2.013438206757496 0.45489980725953205 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 81180 17298 PKGKRGEK True H1975_Epitope_Rep2 898.5348491272598 898.53374993586 71.829 2 -2.0135205410466526 0.45489980725953205 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF'] 82013 21183 PLVMRWFL True PC9_epitope_Rep4 1060.58919319924 1060.5880899358601 89.643 2 -2.0135502322713785 0.45489980725953205 1.0 ['ENST00000554401.1_1_14:102549915-102549966:-|nuORF'] 45660 12276 IREYVRWMMYW True H1975_Epitope_Rep3 1631.7741104997897 1631.77300993586 52.397 2 -2.0136116237721176 0.45489980725953205 1.0 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF', 'ENST00000519875.1_1_8:21997686-21998995:-|nuORF'] 41787 24892 IARIPLLRDS True NCI_RA007_Epitope_Rep5 1152.69789170108 1152.69737496793 103.24 1 -2.0136893583132434 0.45489980725953205 1.0 ['DCAF12L1|p.N429Mfs*13|1|0.05|ENSG00000198889|chrX:126551325-126551325|G/-|frameshift_variant', 'ENSG00000198889|ENST00000371126|DCAF12L1'] 3343 9300 AGGLVWHP True H1975_Epitope_Rep3 835.4340724568299 835.4335249679301 40.767 1 -2.013695896434933 0.45489980725953205 1.0 ['RYR1|p.D544Efs*26|1|0.08|ENSG00000196218|chr19:38455505-38455506|-/G|frameshift_variant'] 98802 24317 SGLSSRCK True PC9_epitope_Rep1 836.41743641652 836.41632993586 98.365 2 -2.0142777534405267 0.4549487466620725 1.0 ['PFKFB3|p.G275C|1|0.24|ENSG00000170525|chr10:6220857-6220857|G/T|missense_variant'] 109448 16493 TDKRKKKG True NCI_RA007_Epitope_Rep3 959.5876129761098 959.58650993586 72.671 2 -2.014356439409278 0.4549497168206387 1.0 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26', 'ENST00000481482.5_1_7:138818528-138853308:+|nuORF'] 20620 5034 EPTSEKKL True H1975_Epitope_Rep3 930.5022115863 930.50110993586 24.484 2 -2.014382199149852 0.4549497168206387 1.0 ['ENST00000559010.1_1_15:85081807-85085521:-|nuORF', 'ENST00000354771.8_1_15:85081845-85089490:-|nuORF', 'ENST00000339094.5_1_15:85081807-85112930:-|nuORF'] 125902 25525 VLAVVRLQQQ True PC9_epitope_Rep3 1152.69789170108 1152.69737496793 103.65 1 -2.0147876712696258 0.4549878869448183 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL'] 50105 24821 KKKDHLISGLL True PC9_epitope_Rep5 1250.7710566413398 1250.76994993586 100.63 2 -2.0148925260407062 0.4549888562292064 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 4946 12400 ALGEVLRLN True PC9_epitope_Rep3 983.57637958607 983.5758349679301 52.725 1 -2.01491321938257 0.4549888562292064 1.0 ['nc|ENSG00000100565|Q0VAA2|LRRC74A', 'ENSG00000100565|ENST00000689127|LRRC74A'] 122591 22590 VGFFILLRIF True PC9_epitope_Rep4 1223.74305098835 1223.7424749679299 95.124 1 -2.015129983363178 0.4549917638319176 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12'] 69013 12673 LTPTRSFYP True H1975_Epitope_Rep1 1080.56039516876 1080.55928993586 53.8 2 -2.0152730618435326 0.4549917638319176 1.0 ['ENSG00000214338|ENST00000525778|SOGA3', 'ENST00000474293.2_1_6:127775237-127796815:-|nuORF'] 134493 14633 VYPTTSRVL True PC9_epitope_Rep4 1034.5760452328998 1034.57494993586 64.216 2 -2.0152813436512287 0.4549917638319176 1.0 ['ENST00000360244.8_1_1:150238759-150238873:-|nuORF'] 124079 6949 VGSLPLEK True PC9_epitope_Rep5 841.49091862661 841.48982993586 31.698 2 -2.0154703356418855 0.4549917638319176 1.0 ['nc|ENSG00000169258|Q7Z2K8-2|GPRIN1', 'ENSG00000169258|ENST00000303991|GPRIN1'] 139002 24872 YKTIKTKL True NCI_RA007_Epitope_Rep5 993.6222671493299 993.6211699358599 103.16 2 -2.015501167174156 0.4549917638319176 1.0 ['ENST00000486940.2_1_13:46090326-46105393:+|nuORF', 'ENSG00000136152|ENST00000349995|COG3'] 62976 24596 LLPKKPTA True PC9_epitope_Rep4 866.5589386167799 866.55784993586 103.1 2 -2.0155296642858667 0.4549917638319176 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 119004 19939 VAETRKRKGLK True NCI_RA007_Epitope_Rep1 1284.79900272468 1284.7979099358602 81.762 2 -2.0155940217606494 0.45499273294934595 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 44705 8465 ILVDLAVS True H1975_Epitope_Rep3 828.49566965388 828.49456993586 37.545 2 -2.0156413653586953 0.45499273294934595 1.0 ['nc|ENSG00000056998|O15488-6|GYG2'] 105812 19441 SSKKGKARL True H1975_Epitope_Rep2 973.6032630402498 973.60216993586 80.686 2 -2.015804433182694 0.4549986004349418 1.0 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF', 'ENST00000482545.5_1_1:113239451-113241292:+|nuORF', 'ENST00000490413.1_1_1:113240935-113242190:+|nuORF', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 41340 21347 HWKGHEHS True H1975_Epitope_Rep2 1016.45766143572 1016.45656993586 88.33 2 -2.015994456078318 0.4550005382710733 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 102144 23231 SLRQQLRER True PC9_epitope_Rep1 1184.6738022115599 1184.6727099358602 94.154 2 -2.016160817792693 0.4550005382710733 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 16945 23347 EFSFIHLE True NCI_RA007_Epitope_Rep5 1020.4916469025999 1020.49054993586 97.092 2 -2.0162981054340046 0.4550005382710733 1.0 ['ENST00000439182.2_1_2:47762033-47762180:+|nuORF'] 112111 24474 TIWEIKLL True H1975_Epitope_Rep1 1014.6113681124599 1014.61026993586 101.44 2 -2.016687026382535 0.4550005382710733 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF'] 72103 21958 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 91.597 2 -2.0169947059505247 0.4550093113878812 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 96942 6463 SAVSSYRGPE True PC9_epitope_Rep6 1051.4934378077498 1051.4923499358601 33.5 2 -2.017037361657584 0.4550093113878812 1.0 ['ENST00000470238.1_1_1:169838129-169857981:-|nuORF'] 60939 11219 LIDCEVERI True H1975_Epitope_Rep3 1088.55359553616 1088.5524899358602 48.253 2 -2.017132925130541 0.4550093113878812 1.0 ['GRIA3|p.S817Rfs*3|1|0.6|ENSG00000125675|chrX:123482810-123482810|C/-|frameshift_variant', 'nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 82724 25059 PRDGSGNG True H1975_Epitope_Rep2 758.3307295871 758.3301849679301 102.97 1 -2.017231380802735 0.4550093113878812 1.0 ['PLIN5|p.H423P|1|0.24|ENSG00000214456|chr19:4523652-4523652|T/G|missense_variant'] 80370 10508 PGHGFCSP True H1975_Epitope_Rep2 800.3275587829601 800.3270049679301 45.438 1 -2.017293882628164 0.4550093113878812 1.0 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF'] 80406 22189 PGKAPRYL True H1975_Epitope_Rep2 900.5181364339599 900.51702993586 91.703 2 -2.0173311911687057 0.4550093113878812 1.0 ['nc|ENSG00000211639|A0A075B6I1|IGLV4-60'] 124675 21490 VGYGGSRHL True PC9_epitope_Rep2 944.4828135543999 944.4822649679301 88.132 1 -2.0174341716517787 0.4550093113878812 1.0 ['ENST00000445155.5_3_10:106014771-106014894:+|nuORF'] 92224 23920 RLKAGHGG True PC9_epitope_Rep2 794.4511195032999 794.45002993586 97.487 2 -2.0176771857902995 0.4550122170435831 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 30913 16109 GAQNMIQMYS True PC9_epitope_Rep3 1141.48961538061 1141.48850993586 67.113 2 -2.0180141350527245 0.4550122170435831 1.0 ['PKN2|p.E156Q|1|0.15|ENSG00000065243|chr1:88760338-88760338|G/C|missense_variant'] 92383 23454 RLPKGPRPE True PC9_epitope_Rep6 1048.6141620771198 1048.61357496793 103.32 1 -2.018086780138731 0.4550122170435831 1.0 ['ENST00000600252.5_1_19:15219815-15220064:+|nuORF'] 100376 14873 SKTSGKAK True NCI_RA007_Epitope_Rep3 805.4657665079299 805.46466993586 65.935 2 -2.01809458275337 0.4550122170435831 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 31085 16371 GAVATRDGEAP True PC9_epitope_Rep2 1042.50433684462 1042.5032299358602 68.215 2 -2.0181015844275834 0.4550122170435831 1.0 ['ENST00000527040.5_1_17:72733375-72740608:+|nuORF', 'RAB37|p.G166Wfs*9|1|0.06|ENSG00000172794|chr17:74745013-74745025|CGGTGTTCCCTTC/-|frameshift_variant', 'nc|ENSG00000172794|Q96AX2-4|RAB37', 'ENSG00000172794|ENST00000392613|RAB37'] 20398 13034 EPCFWGVR True NCI_RA007_Epitope_Rep3 992.4538219252398 992.45272993586 58.542 2 -2.0181488732922817 0.4550122170435831 1.0 ['ENST00000482462.1_1_7:540672-552294:-|nuORF'] 72328 11919 MINKTDPHIE True PC9_epitope_Rep3 1196.5859582935998 1196.58430490379 50.868 3 -2.0183187454447125 0.45501808318264014 1.0 ['ARMCX2|p.K445E|1|0.44|ENSG00000184867|chrX:101656256-101656256|T/C|missense_variant'] 71608 12750 MDKDGYFWFVA True PC9_epitope_Rep5 1377.60635938501 1377.6052699358602 54.05 2 -2.018525606050985 0.45502981508191076 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 3314 12132 AGGGHPNK True H1975_Epitope_Rep1 736.36163579256 736.3610849679301 51.682 1 -2.018580007317056 0.45502981508191076 1.0 ['ENST00000490362.1_1_2:217498183-217525611:+|nuORF'] 123593 24477 VGQAGLERLT True PC9_epitope_Rep2 1042.5771078620598 1042.57657496793 99.74 1 -2.0188559794705134 0.4550317511570337 1.0 ['nc|ENSG00000131747|P11388-4|TOP2A', 'ENST00000510078.5_1_3:129117911-129118223:-|nuORF'] 59189 10256 LFDEIHWI True PC9_epitope_Rep1 1071.53893144819 1071.5378299358601 44.333 2 -2.0188575317818414 0.4550317511570337 1.0 ['ENSG00000100271|ENST00000266254|TTLL1', 'nc|ENSG00000100271|O95922-4|TTLL1'] 92013 24673 RKRQGFAV True PC9_epitope_Rep4 960.5617325814397 960.56062993586 103.4 2 -2.0189510234791945 0.4550317511570337 1.0 ['ENST00000549966.5_2_12:50135373-50143445:+|nuORF'] 132547 21326 VVDTVLAL True H1975_Epitope_Rep2 828.4956696538799 828.49456993586 88.245 2 -2.0191178931628584 0.4550317511570337 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 69851 9973 LVHHLVLT True NCI_RA007_Epitope_Rep1 930.56508662638 930.5645349679301 42.797 1 -2.0196176842490816 0.45503761664388503 1.0 ['PCDHGA7|p.R206L|1|0.24|ENSG00000253537|chr5:141383516-141383516|G/T|missense_variant'] 25242 12266 FDIGWLAE True NCI_RA007_Epitope_Rep1 949.4545331178899 949.45342993586 51.683 2 -2.0196525983296927 0.45504348200447736 1.0 ['ENSG00000133116|ENST00000380099|KL', 'KL|p.L785Sfs*7|1|0.41|ENSG00000133116|chr13:33061427-33061428|-/T|frameshift_variant'] 14815 22203 DVRPLYSRR True PC9_epitope_Rep4 1160.64143945412 1160.64034993586 93.648 2 -2.019824334586421 0.455060109995372 1.0 ['ENSG00000185010|ENST00000360256|F8'] 123435 15112 VGNLASGK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 64.796 1 -2.0199020352135153 0.4550669421843385 1.0 ['nc|ENSG00000157985|Q9UPQ3-3|AGAP1', 'nc|ENSG00000157985|Q9UPQ3-2|AGAP1', 'ENSG00000157985|ENST00000304032|AGAP1'] 114183 12349 TPLDLTPSIH True PC9_epitope_Rep6 1092.58152453616 1092.5804299358601 58.903 2 -2.019948932371076 0.4550669421843385 1.0 ['ENST00000305901.6_1_15:53049335-53049596:-|nuORF'] 35521 22161 GSRGHCGP True PC9_epitope_Rep2 769.32895576529 769.32840496793 90.73 1 -2.019998313035511 0.4550669421843385 1.0 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 39928 22031 HPHIITLI True PC9_epitope_Rep4 942.5650866263801 942.56398993586 92.963 2 -2.020020691801199 0.45507280691369717 1.0 ['nc|ENSG00000156873|P15735-2|PHKG2', 'ENSG00000156873|ENST00000563588|PHKG2'] 85463 7530 QFHETLEP True PC9_epitope_Rep2 999.4661604307498 999.46506993586 34.332 2 -2.0202398540684348 0.4550786715168213 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST'] 123374 10904 VGMHFMVN True PC9_epitope_Rep2 933.42007926881 933.4189899358599 47.262 2 -2.0207527940561345 0.4550864694424416 1.0 ['ENST00000396161.9_2_19:58131980-58132310:+|nuORF'] 20619 4979 EPTSEKKL True H1975_Epitope_Rep2 930.5022115863 930.50110993586 24.235 2 -2.0208378496873247 0.4550864694424416 1.0 ['ENST00000559010.1_1_15:85081807-85085521:-|nuORF', 'ENST00000354771.8_1_15:85081845-85089490:-|nuORF', 'ENST00000339094.5_1_15:85081807-85112930:-|nuORF'] 42019 5051 IDGRWSPWSPW True NCI_RA007_Epitope_Rep1 1385.6516697846498 1385.6500349037901 23.731 3 -2.0208873569092565 0.4550864694424416 1.0 ['ENSG00000186340|ENST00000617924|THBS2', 'THBS2|p.C896Vfs*105|1|0.3|ENSG00000186340|chr6:169225233-169225233|G/-|frameshift_variant', 'ENST00000461848.1_1_6:169634823-169637340:-|nuORF'] 79768 4189 PECFVVGK True PC9_epitope_Rep1 877.4367748787698 877.43566993586 21.008 2 -2.0208924466533333 0.4550864694424416 1.0 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2', 'ENST00000530992.1_1_17:32364642-32365872:-|nuORF', 'nc|ENSG00000198586|Q9UKI8-3|TLK1', 'nc|ENSG00000198586|Q9UKI8-4|TLK1', 'nc|ENSG00000198586|Q9UKI8-5|TLK1', 'ENSG00000198586|ENST00000431350|TLK1', 'nc|ENSG00000198586|Q9UKI8-2|TLK1'] 82321 16641 PPIMLIGH True NCI_RA007_Epitope_Rep5 876.4891448047999 876.48804993586 70.775 2 -2.020911085660975 0.4550864694424416 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 135940 3947 WPWRNTSEM True NCI_RA007_Epitope_Rep5 1205.52877777065 1205.52768993586 21.516 2 -2.0209607257732616 0.45508743610438523 1.0 ['ENST00000316637.6_1_6:35277486-35278290:+|nuORF'] 57858 7970 LEFCFSRE True H1975_Epitope_Rep3 1029.45896687533 1029.4578699358601 35.628 2 -2.0209908937281185 0.45508743610438523 1.0 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 21962 4411 ESEFYLAMN True NCI_RA007_Epitope_Rep1 1102.4641118254199 1102.46300993586 21.271 2 -2.0213137566814376 0.45510406129608505 1.0 ['ENST00000441829.2_9:44302237-44303615:+|nuORF', 'ENSG00000140285|ENST00000267843|FGF7'] 12809 9385 DLFMMPRI True PC9_epitope_Rep2 1021.5088942732099 1021.50778993586 41.436 2 -2.0213857480616726 0.45510992499488845 1.0 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 32367 25363 GFIILVICFI True PC9_epitope_Rep2 1136.6667748136 1136.66566993586 103.24 2 -2.021449636515364 0.45511578856749313 1.0 ['ENSG00000112378|ENST00000421351|PERP'] 103911 21883 SQAKIEHAAA True PC9_epitope_Rep4 1024.5301576696397 1024.5290699358602 92.384 2 -2.021892614232225 0.45513241291738854 1.0 ['ENSG00000275342|ENST00000615670|PRAG1'] 71606 12156 MDKDGYFWFVA True PC9_epitope_Rep2 1377.60635938501 1377.6052699358602 52.069 2 -2.022039324174541 0.45514413920005165 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 119158 22327 VAIPLVLLVVL True H1975_Epitope_Rep3 1147.79441785487 1147.7933299358601 93.35 2 -2.022118922438771 0.45514413920005165 1.0 ['ENST00000478345.1_1_6:117862091-117866721:+|nuORF', 'nc|ENSG00000164465|Q8N8Z6-2|DCBLD1', 'DCBLD1|p.M537Nfs*43|1|0.1|ENSG00000164465|chr6:117545590-117545591|-/A|frameshift_variant', 'ENSG00000164465|ENST00000338728|DCBLD1'] 52922 23082 KPGKMFVLR True PC9_epitope_Rep2 1074.6372060208198 1074.63610993586 94.276 2 -2.022399405921104 0.4551558649779949 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 36425 21008 GVFVKRLC True NCI_RA007_Epitope_Rep3 920.5265929426798 920.52548993586 91.427 2 -2.0224494886916453 0.4551558649779949 1.0 ['ENSG00000140968|ENST00000268638|IRF8'] 6491 12040 APSPRDPAPL True PC9_epitope_Rep4 1019.5399940773499 1019.53888993586 54.118 2 -2.022766929770213 0.45518324832676954 1.0 ['ENST00000318291.4_1_12:752234-753264:+|nuORF'] 82103 21282 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 88.909 2 -2.0233268733590837 0.4552213912949911 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 18807 14298 ELDILLQW True H1975_Epitope_Rep3 1028.55424715916 1028.5531499358601 60.34 2 -2.0234155804248495 0.45522725316346735 1.0 ['nc|ENSG00000162891|Q9NYY1-2|IL20', 'ENSG00000162891|ENST00000367098|IL20'] 57200 7883 LDVNTRNPNYE True NCI_RA007_Epitope_Rep3 1333.62624288245 1333.62514993586 38.124 2 -2.0234707997714247 0.4552331149057964 1.0 ['ENSG00000141200|ENST00000268919|KIF2B', 'KIF2B|p.E599*|1|0.34|ENSG00000141200|chr17:53824825-53824826|-/T|frameshift_variant', 'KIF2B|p.P209Rfs*10|1|0.27|ENSG00000141200|chr17:53823655-53823655|C/-|frameshift_variant'] 10311 10907 CDPSAPLA True NCI_RA007_Epitope_Rep2 772.34254014076 772.3419949679301 47.033 1 -2.0237098379662077 0.45524676414576676 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1'] 66389 2612 LSGIQVTR True NCI_RA007_Epitope_Rep5 872.50796567308 872.50686993586 14.743 2 -2.023883918890484 0.45524676414576676 1.0 ['ENST00000333503.7_1_16:2263414-2263492:-|nuORF'] 92101 24945 RKYSIFQK True PC9_epitope_Rep3 1068.6080140675197 1068.6069099358601 101.31 2 -2.0239385779618337 0.45524676414576676 1.0 ['ENST00000593409.5_1_19:16757215-16757275:-|nuORF'] 132726 25000 VVHSALLA True PC9_epitope_Rep5 808.48068829608 808.47958993586 101.32 2 -2.024004226377682 0.45524676414576676 1.0 ['ENSG00000104442|ENST00000276569|ARMC1'] 30034 5761 FYFVDDIDDR True H1975_Epitope_Rep3 1303.5720820512697 1303.57098993586 27.186 2 -2.0240467791564853 0.45524676414576676 1.0 ['ENSG00000123384|ENST00000243077|LRP1'] 109566 17329 TDVHGVMF True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 73.43 2 -2.024144489018159 0.45524676414576676 1.0 ['nc|ENSG00000089472|Q9BQS7-2|HEPH', 'ENSG00000089472|ENST00000343002|HEPH', 'nc|ENSG00000089472|Q9BQS7-3|HEPH', 'nc|ENSG00000089472|Q9BQS7-4|HEPH'] 133422 23799 VVVTVQYRL True PC9_epitope_Rep1 1075.6389798426299 1075.6378899358601 96.341 2 -2.0241919483358437 0.4552526252367017 1.0 ['CES3|p.K457Mfs*35|1|0.13|ENSG00000172828|chr16:66972434-66972437|AGGC/-|frameshift_variant', 'ENSG00000172828|ENST00000303334|CES3'] 122965 24235 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 98.225 2 -2.0243436780491475 0.4552535881049211 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 60486 21763 LHAAAAAA True NCI_RA007_Epitope_Rep4 694.37622322754 694.3756749679301 94.349 1 -2.0243764669084334 0.4552535881049211 1.0 ['ENSG00000125816|ENST00000351817|NKX2-4', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 23522 19455 EVVPLCLPAP True NCI_RA007_Epitope_Rep4 1036.5627036678798 1036.5616099358601 84.101 2 -2.0244993987246733 0.45525944893326303 1.0 ['ENST00000288943.4_1_2:96809359-96809716:-|nuORF'] 86976 11130 QLWWRNWFWVH True H1975_Epitope_Rep1 1656.8102361147198 1656.80912993586 47.779 2 -2.024594092657543 0.4552604116235785 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 3872 8279 AGYSKNEP True NCI_RA007_Epitope_Rep5 864.39774651776 864.39664993586 38.524 2 -2.024632013634458 0.4552604116235785 1.0 ['ENST00000374156.8_1_10:50374798-50374906:-|nuORF'] 69946 11089 LVKVAPKRP True NCI_RA007_Epitope_Rep2 1006.6651350208199 1006.66402993586 47.714 2 -2.0249464022818646 0.4552689883628385 1.0 ['ENSG00000255587|ENST00000612677|RAB44'] 87899 21207 QRIINHAA True PC9_epitope_Rep6 921.5144480358499 921.51334993586 94.421 2 -2.0250597547992855 0.4552689883628385 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|45|1|sense', 'L1PA6_dup546|chr2:49227587-49231532:-|2.2943093314432543|0.2927699401366612|2.97|541.0|109|3|sense', 'L1PA4_dup9334|chr12:12409221-12411354:-|1.3393414808808248|0.0111968938891953|6.9|450.0|31|2|sense', 'chr3:98867438-98881540|151|18.55|0.23|6.34|-|1|TE_info:L1PA5,L1PA5_dup2059,L1,LINE,acceptor,-,98865721,98867438|None,DCBLD2|12'] 93577 6173 RQLWWYHWICW True H1975_Epitope_Rep3 1675.78705814199 1675.78540490379 28.755 3 -2.0251022370664447 0.4552689883628385 1.0 ['SGMS1|p.R303Q|1|0.26|ENSG00000198964|chr10:50308136-50308136|C/T|missense_variant'] 32276 21889 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 91.322 2 -2.0251059366354593 0.4552689883628385 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 30456 5135 GAFQDSALSP True PC9_epitope_Rep4 991.4610750503099 991.45996993586 26.416 2 -2.0251549307395296 0.4552689883628385 1.0 ['nc|ENSG00000178226|Q5K4E3-2|PRSS36', 'PRSS36|p.G748Wfs*16|1|0.2|ENSG00000178226|chr16:31140342-31140343|-/G|frameshift_variant', 'nc|ENSG00000178226|Q5K4E3-3|PRSS36', 'ENSG00000178226|ENST00000268281|PRSS36'] 21543 5941 ERNHWHYRDLE True H1975_Epitope_Rep1 1553.71237254825 1553.7112699358602 27.923 2 -2.025449113029081 0.4552689883628385 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 116124 6829 TSSLDSWRQL True PC9_epitope_Rep4 1191.58840082175 1191.58730993586 33.487 2 -2.0257227449863673 0.4552689883628385 1.0 ['ARHGAP21|p.R1688W|1|0.29|ENSG00000107863|chr10:24585227-24585227|G/A|missense_variant'] 55505 15533 LAGKTQTA True NCI_RA007_Epitope_Rep5 788.4392174069199 788.4386649679301 66.448 1 -2.025782645563912 0.4552689883628385 1.0 ['ENST00000490549.1_1_10:25883203-25888200:+|nuORF', 'ENSG00000151025|ENST00000376351|GPR158', 'GPR158|p.L914P|1|0.2|ENSG00000151025|chr10:25598367-25598367|T/C|missense_variant', 'GPR158|p.G924D|1|0.11|ENSG00000151025|chr10:25598397-25598397|G/A|missense_variant'] 123127 11081 VGKNEKTK True PC9_epitope_Rep1 902.5185303567799 902.51798496793 47.511 1 -2.0258291006734646 0.4552689883628385 1.0 ['ENSG00000159079|ENST00000290155|CFAP298', 'ENST00000483315.1_1_21:33975401-33976611:-|nuORF'] 70752 14879 LWWRNWFWVHF True NCI_RA007_Epitope_Rep1 1675.8200725224299 1675.8189699358602 61.934 2 -2.0258991256262924 0.4552689883628385 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 123897 21017 VGRRRRHR True PC9_epitope_Rep6 1091.6649092937098 1091.66437496793 93.666 1 -2.0259721993970574 0.4552689883628385 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 122955 21409 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 89.412 2 -2.0261968332263063 0.4552689883628385 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 112226 24839 TKLLRWVKKEE True PC9_epitope_Rep2 1428.8452842107602 1428.8441899358602 101.23 2 -2.0262191221675145 0.4552689883628385 1.0 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'ENSG00000103111|ENST00000248248|MON1B'] 38021 22709 HAPALHLT True PC9_epitope_Rep6 858.4711862415401 858.47008993586 100.42 2 -2.026263812887675 0.4552689883628385 1.0 ['ENST00000308406.9_1_17:19284741-19284873:+|nuORF'] 22137 10076 ESRPHALP True H1975_Epitope_Rep2 905.4719145175299 905.4713649679301 43.75 1 -2.0263410828442208 0.4552689883628385 1.0 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant', 'nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 135678 25685 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 108.67 3 -2.026418287494854 0.4552689883628385 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 100554 17309 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 71.838 2 -2.02645606351057 0.4552689883628385 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 91672 15762 RIVRRYLLRRQ True PC9_epitope_Rep2 1527.9586316839097 1527.95698490379 65.895 3 -2.0265108451456983 0.4552689883628385 1.0 ['nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 139909 25126 YPVPIVLI True PC9_epitope_Rep1 912.56844067132 912.56734993586 101.53 2 -2.0265341584696217 0.4552689883628385 1.0 ['OR11H6|p.L184I|1|0.25|ENSG00000176219|chr14:20224259-20224259|C/A|missense_variant', 'ENSG00000176219|ENST00000315519|OR11H6'] 80642 19437 PGSKPFCPT True NCI_RA007_Epitope_Rep5 932.4425885351999 932.44148993586 81.652 2 -2.0266663513101313 0.4552689883628385 1.0 ['ENSG00000213445|ENST00000534313|SIPA1'] 48619 2008 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 10.778 3 -2.026747717744737 0.4552689883628385 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 25239 23427 FDIATKKA True NCI_RA007_Epitope_Rep4 892.50181766348 892.50072993586 101.68 2 -2.0268176460698673 0.4552689883628385 1.0 ['nc|ENSG00000174226|Q8N9S9-2|SNX31', 'ENSG00000174226|ENST00000311812|SNX31'] 135684 26240 WLPTMRNLF True PC9_epitope_Rep1 1176.6113851958 1176.60973490379 106.33 3 -2.026843606171424 0.4552689883628385 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 60866 23809 LHWHDRSA True PC9_epitope_Rep2 1020.488961564 1020.48786993586 97.051 2 -2.0271449004233104 0.4552689883628385 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF'] 63577 6159 LMELHGEG True PC9_epitope_Rep6 884.40620302648 884.40510993586 32.127 2 -2.027182939730091 0.4552689883628385 1.0 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000472161.1_1_18:57817108-57817555:+|nuORF', 'ENST00000425466.1_1_13:27151692-27151773:+|nuORF', 'ENST00000493479.1_1_4:153472470-153472710:-|nuORF'] 23500 21986 EVVEKQFD True NCI_RA007_Epitope_Rep3 992.4814761417198 992.48036993586 95.519 2 -2.027270288804221 0.4552689883628385 1.0 ['nc|ENSG00000132972|Q9BXT8-4|RNF17', 'nc|ENSG00000132972|Q9BXT8-5|RNF17', 'ENSG00000132972|ENST00000255324|RNF17', 'nc|ENSG00000132972|Q9BXT8-2|RNF17', 'nc|ENSG00000132972|Q9BXT8-1|RNF17'] 74939 24351 NHLKKLVPRH True PC9_epitope_Rep4 1240.7516586094398 1240.75056993586 102.15 2 -2.027371762884239 0.4552689883628385 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10'] 123598 6963 VGQDGRQVKE True PC9_epitope_Rep4 1114.5730851107799 1114.57198993586 34.021 2 -2.027464587754418 0.4552689883628385 1.0 ['nc|ENSG00000141252|Q5VIR6-2|VPS53'] 6742 13915 AQAVERAKQV True PC9_epitope_Rep5 1098.61455599994 1098.6134499358602 58.544 2 -2.027503485527901 0.4552689883628385 1.0 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'TLE3|p.E487Rfs*6|1|0.41|ENSG00000140332|chr15:70055177-70055177|C/-|frameshift_variant', 'ENSG00000196781|ENST00000376499|TLE1'] 81736 24690 PLPCSHPA True PC9_epitope_Rep3 820.39015903952 820.38906993586 100.34 2 -2.027697660331811 0.4552856021252111 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 77440 18810 NSNQLQPI True PC9_epitope_Rep5 912.4664947839199 912.46538993586 77.365 2 -2.0278698341070385 0.45529146052914604 1.0 ['ENSG00000178295|ENST00000381254|GEN1'] 120398 10456 VEELILPG True NCI_RA007_Epitope_Rep4 868.4905842734399 868.49003496793 47.068 1 -2.0280248873542326 0.4553080736924748 1.0 ['ENST00000476287.3_1_6:170714796-170714856:+|nuORF'] 82222 22969 PPAPPLRM True PC9_epitope_Rep5 877.48439377753 877.48328993586 93.34 2 -2.028212499665244 0.4553246864984621 1.0 ['ENSG00000077264|ENST00000372007|PAK3', 'nc|ENSG00000077264|O75914|PAK3', 'nc|ENSG00000077264|O75914-4|PAK3', 'nc|ENSG00000077264|O75914-3|PAK3'] 93016 24969 RPKTIRQRH True PC9_epitope_Rep5 1190.71085642662 1190.7097499358601 101.22 2 -2.0285643317212476 0.4553305442930428 1.0 ['ENST00000605810.1_1_3:70174691-70175321:-|nuORF'] 10410 21665 CGYPLVSC True H1975_Epitope_Rep2 840.35099664948 840.34988993586 89.623 2 -2.0287502673636615 0.45534024432209225 1.0 ['nc|ENSG00000135119|Q96EX2-2|RNFT2'] 114944 7053 TQTLQFEVQAR True H1975_Epitope_Rep3 1319.6833638357498 1319.6822699358602 32.094 2 -2.028758273742541 0.45534024432209225 1.0 ['nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4', 'ENSG00000242419|ENST00000306593|PCDHGC4'] 107508 7877 SVNPQWNHT True NCI_RA007_Epitope_Rep1 1081.49410651409 1081.49300993586 34.633 2 -2.0288934894055215 0.45534024432209225 1.0 ['ENSG00000147041|ENST00000297875|SYTL5', 'nc|ENSG00000147041|Q8TDW5-2|SYTL5'] 21570 12007 ERQEQEERERR True NCI_RA007_Epitope_Rep1 1543.7451292285098 1543.74402993586 50.692 2 -2.0289617465117757 0.45534024432209225 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENST00000471767.1_1_5:176893910-176894598:-|nuORF'] 135942 4867 WPWRNTSEM True PC9_epitope_Rep2 1205.52877777065 1205.52768993586 24.088 2 -2.0291735757585756 0.45534024432209225 1.0 ['ENST00000316637.6_1_6:35277486-35278290:+|nuORF'] 87236 20860 QPLHKARR True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 86.373 2 -2.0291904803314753 0.45534024432209225 1.0 ['ENST00000417220.6_1_3:51978121-51978467:+|nuORF'] 119718 17252 VAVTRSRK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 73.134 2 -2.029202862183848 0.45534024432209225 1.0 ['ENSG00000182156|ENST00000328313|ENPP7'] 93935 22965 RRGRNQQIA True PC9_epitope_Rep4 1097.61662168861 1097.6155299358602 96.554 2 -2.029242330947766 0.45534024432209225 1.0 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'NCOR1|p.I585Sfs*5|1|0.09|ENSG00000141027|chr17:16121152-16121152|C/-|frameshift_variant', 'nc|ENSG00000141027|O75376-3|NCOR1'] 139141 9293 YLDRDFEYK True NCI_RA007_Epitope_Rep2 1247.58225281215 1247.5811499358601 40.758 2 -2.029269860685104 0.45534024432209225 1.0 ['DMD|p.E1182D|1|0.23|ENSG00000198947|chrX:32454719-32454719|C/G|missense_variant'] 82495 13419 PPRFTKGL True NCI_RA007_Epitope_Rep2 914.5337864980999 914.53268993586 56.839 2 -2.0293606439109304 0.45535685481702926 1.0 ['ENSG00000118946|ENST00000377918|PCDH17', 'PCDH17|p.V478L|1|0.52|ENSG00000118946|chr13:57633978-57633978|G/T|missense_variant', 'nc|ENSG00000118946|O14917-2|PCDH17', 'PCDH17|p.N1014Tfs*6|1|0.36|ENSG00000118946|chr13:57724852-57724852|C/-|frameshift_variant', 'PCDH17|p.E1137Kfs*3|1|0.13|ENSG00000118946|chr13:57725222-57725222|G/-|frameshift_variant'] 8248 9308 ATGPSAHEE True H1975_Epitope_Rep3 897.3828247296101 897.38227496793 40.798 1 -2.029630853183109 0.4553627115727896 1.0 ['DCAF6|p.G730Vfs*5|1|0.18|ENSG00000143164|chr1:168065609-168065609|G/-|frameshift_variant', 'nc|ENSG00000143164|Q58WW2|DCAF6', 'nc|ENSG00000143164|Q58WW2-2|DCAF6', 'nc|ENSG00000143164|Q58WW2-4|DCAF6', 'ENSG00000143164|ENST00000367840|DCAF6'] 83791 18212 PVKTNSSLY True PC9_epitope_Rep3 1007.5287606873101 1007.52766993586 75.265 2 -2.0298518639449874 0.45536856820259153 1.0 ['ENST00000222690.10_1_7:44866953-44867181:-|nuORF'] 126622 5633 VLNENNVPL True NCI_RA007_Epitope_Rep5 1010.53965972418 1010.53856993586 28.355 2 -2.030243549688754 0.45537442470643896 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 130331 23809 VSKGRGGL True NCI_RA007_Epitope_Rep3 772.4555361773998 772.45498496793 103.18 1 -2.03036130196272 0.45538028108433604 1.0 ['ENSG00000160194|ENST00000354250|NDUFV3'] 89173 15903 QVRVLHHRHHR True PC9_epitope_Rep1 1473.82901449669 1473.8279099358601 65.981 2 -2.030560905126633 0.45540764317512206 1.0 ['ENST00000314222.4_1_11:2949785-2950526:-|nuORF'] 127569 24288 VNSSWKSEPE True PC9_epitope_Rep1 1161.53021723929 1161.52858490379 98.248 3 -2.0307576891948758 0.4554134990698825 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-4|RUSC1'] 26067 25610 FGKVKVGK True PC9_epitope_Rep3 861.5436229058098 861.54252993586 104.0 2 -2.03102093132051 0.4554144579090547 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 77425 17115 NSLEYPATMT True NCI_RA007_Epitope_Rep3 1125.50122561013 1125.5006749679299 75.192 1 -2.031057561175424 0.4554144579090547 1.0 ['ENSG00000215041|ENST00000399464|NEURL4', 'nc|ENSG00000215041|Q96JN8-2|NEURL4'] 15128 7695 EAAAAQYTP True H1975_Epitope_Rep1 920.4239612656 920.42286993586 34.561 2 -2.0314710989587503 0.4554310659985807 1.0 ['ENSG00000256812|ENST00000457326|CAPNS2'] 101680 10916 SLMAYAAR True PC9_epitope_Rep1 881.4429228883699 881.44182993586 46.874 2 -2.0318058138379143 0.45543787968388794 1.0 ['ENSG00000160703|ENST00000409109|NLRX1', 'ENST00000481860.6_1_11:119043673-119051967:+|nuORF', 'nc|ENSG00000160703|Q86UT6-2|NLRX1', 'NLRX1|p.Y505Lfs*20|1|0.38|ENSG00000160703|chr11:119175115-119175116|-/T|frameshift_variant'] 65304 15895 LRAQYWFV True NCI_RA007_Epitope_Rep5 1081.5709002828098 1081.5698099358601 67.866 2 -2.0318509387896917 0.45543787968388794 1.0 ['ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A'] 10820 7829 CSRHGSGP True NCI_RA007_Epitope_Rep1 799.3395204489899 799.3389749679301 34.444 1 -2.031852383479915 0.45543787968388794 1.0 ['ENSG00000160741|ENST00000368633|CRTC2', 'ENST00000461638.6_1_1:153920587-153921610:-|nuORF'] 81167 23061 PKGKMIPVLH True PC9_epitope_Rep3 1118.6634207686598 1118.66232993586 93.972 2 -2.0321167036050984 0.4554759907962927 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'PPP1R17|p.A128Cfs*19|1|0.39|ENSG00000106341|chr7:31697107-31697108|-/T|frameshift_variant', 'nc|ENSG00000106341|O96001-2|PPP1R17'] 32274 19970 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 83.73 2 -2.0326828910114365 0.4555033492102745 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 93226 5403 RPREALSTNEC True PC9_epitope_Rep5 1274.6037336160598 1274.60209490379 25.795 3 -2.0329316223110365 0.4555092035093755 1.0 ['ENSG00000018510|ENST00000264167|AGPS'] 112575 8273 TLELGDRTA True PC9_epitope_Rep4 974.5032742154599 974.50216993586 39.284 2 -2.033403724195698 0.45557168198677633 1.0 ['PDZD2|p.S2678Hfs*5|1|0.32|ENSG00000133401|chr5:32098446-32098446|C/-|frameshift_variant', 'ENSG00000133401|ENST00000438447|PDZD2', 'nc|ENSG00000133401|O15018-2|PDZD2', 'ENST00000502489.5_1_5:31983264-32077762:+|nuORF'] 596 17736 AARLQLLTLQ True PC9_epitope_Rep3 1125.6869926642098 1125.6853349037901 73.418 3 -2.033408316240273 0.45557168198677633 1.0 ['nc|ENSG00000288550|Q8NAC3-4|IL17RC', 'ENST00000483582.5_1_3:9958999-9974679:+|nuORF', 'nc|ENSG00000288550|Q8NAC3-6|IL17RC', 'nc|ENSG00000288550|Q8NAC3-7|IL17RC', 'nc|ENSG00000288550|Q8NAC3-8|IL17RC', 'nc|ENSG00000288550|Q8NAC3-3|IL17RC', 'nc|ENSG00000288550|Q8NAC3-5|IL17RC', 'ENST00000451271.5_1_3:9958923-9975274:+|nuORF', 'ENSG00000163702|ENST00000403601|IL17RC', 'nc|ENSG00000288550|Q8NAC3|IL17RC', 'ENST00000498214.5_1_3:9965818-9972589:+|nuORF', 'ENST00000464406.5_1_3:9965750-9972589:+|nuORF', 'ENST00000494365.5_1_3:9965750-9975274:+|nuORF', 'ENST00000466046.5_1_3:9965750-9975274:+|nuORF'] 122952 21050 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 87.978 2 -2.0335019402147387 0.45557168198677633 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 126973 17844 VLRQAKAN True NCI_RA007_Epitope_Rep2 898.5348491272599 898.53374993586 74.148 2 -2.033519902514022 0.45557168198677633 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'CWF19L2|p.D680Tfs*13|1|0.37|ENSG00000152404|chr11:107353571-107353571|C/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 15781 9059 EDAERREREER True NCI_RA007_Epitope_Rep2 1473.6920310264902 1473.6909299358601 39.84 2 -2.033584420607479 0.45557168198677633 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 126704 8558 VLPGAYKK True NCI_RA007_Epitope_Rep4 874.5276384885 874.52654993586 39.705 2 -2.033618662875342 0.45557168198677633 1.0 ['ENST00000468490.1_1_5:50571220-50571544:+|nuORF'] 50028 16310 KKAYRKLAL True NCI_RA007_Epitope_Rep5 1089.7022488055297 1089.70114993586 69.492 2 -2.033687908158813 0.45557168198677633 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'DNAJA4|p.N132Mfs*2|1|0.34|ENSG00000140403|chr15:78273172-78273172|A/-|frameshift_variant', 'DNAJA4|p.L281Ifs*14|1|0.1|ENSG00000140403|chr15:78275689-78275690|-/C|frameshift_variant', 'ENST00000398991.3_1_4:100831524-100867699:-|nuORF', 'ENST00000488001.5_1_7:157151266-157161444:+|nuORF', 'ENST00000567680.1_1_15:66064063-66064450:-|nuORF', 'ENST00000464877.1_1_3:186289902-186295640:+|nuORF', 'ENST00000474664.5_1_4:100844167-100867674:-|nuORF', 'nc|ENSG00000293135|Q8WWF6|DNAJB3', 'ENST00000526843.2_1_11:127810983-127811547:-|nuORF', 'ENSG00000179407|ENST00000319153|DNAJB8', 'ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21', 'ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF', 'ENSG00000090520|ENST00000265028|DNAJB11', 'ENSG00000164031|ENST00000442697|DNAJB14', 'nc|ENSG00000164031|Q8TBM8-2|DNAJB14', 'nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1', 'nc|ENSG00000105993|O75190-2|DNAJB6', 'nc|ENSG00000105993|O75190-3|DNAJB6', 'ENSG00000105993|ENST00000262177|DNAJB6'] 92154 19777 RLEKLKLEL True H1975_Epitope_Rep2 1140.7230438197598 1140.72139490379 82.048 3 -2.0339487410097323 0.4555990367248645 1.0 ['ENSG00000168646|ENST00000307078|AXIN2', 'ENST00000577662.1_1_17:63534239-63554825:-|nuORF'] 67201 5349 LSREHYDHQRM True NCI_RA007_Epitope_Rep1 1470.67862989182 1470.67752993586 24.884 2 -2.0340424574619087 0.455632243221742 1.0 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572214.5_1_17:1940203-1943704:+|nuORF'] 32277 22384 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 93.266 2 -2.034070986783448 0.455632243221742 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 81685 8187 PLLTFASQPS True H1975_Epitope_Rep3 1059.5600608155898 1059.5589699358602 36.471 2 -2.034206502245611 0.45563904924694426 1.0 ['ENST00000379328.7_1_10:8097346-8097625:+|nuORF'] 85534 12085 QGAVGPEV True PC9_epitope_Rep4 755.38136817763 755.3808149679301 54.289 1 -2.034212116739844 0.45563904924694426 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 137272 24339 YCPACLVT True H1975_Epitope_Rep2 868.38229677776 868.38118993586 100.15 2 -2.034217366812945 0.45563904924694426 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'ENST00000370082.1_1_20:62201547-62204491:-|nuORF'] 135049 9854 WDVERVAEWPW True H1975_Epitope_Rep1 1471.6884492161896 1471.68734993586 42.836 2 -2.0343790460199878 0.4556879017866741 1.0 ['ENSG00000115548|ENST00000312912|KDM3A', 'KDM3A|p.I669Wfs*37|1|0.17|ENSG00000115548|chr2:86477942-86477973|ATCTTCAACCTGCACTGGGTGTGTCCTCGGTG/-|frameshift_variant'] 108980 7827 TAGFPGSP True H1975_Epitope_Rep3 732.34425439292 732.3437049679301 35.085 1 -2.0344832633591166 0.45569960440316476 1.0 ['CON__P04258', 'nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1'] 114166 21158 TPKQASAT True PC9_epitope_Rep4 802.4184819623399 802.41738993586 89.546 2 -2.0345391323690873 0.45569960440316476 1.0 ['BSN|p.G2876Dfs*18|1|0.14|ENSG00000164061|chr3:49658178-49658178|G/-|frameshift_variant', 'BSN|p.G3480Afs*7|1|0.72|ENSG00000164061|chr3:49662282-49662282|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 75784 20843 NLMDFVKKTG True PC9_epitope_Rep1 1151.60088008175 1151.6003749679298 85.0 1 -2.034629161666619 0.4557005568335734 1.0 ['ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C', 'ENST00000599239.5_1_19:48565437-48599986:-|nuORF'] 502 8092 AAPAEAHF True PC9_epitope_Rep1 812.3817025308 812.38060993586 35.951 2 -2.0347007741335035 0.4557005568335734 1.0 ['SSC4D|p.G524A|1|0.09|ENSG00000146700|chr7:76390216-76390216|C/G|missense_variant'] 24632 8100 FAIYGGVSG True PC9_epitope_Rep4 869.4283183700499 869.4272299358599 38.61 2 -2.0349905948375544 0.45571715738441526 1.0 ['ENSG00000106105|ENST00000389266|GARS1', 'nc|ENSG00000106105|P41250-2|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 19547 9285 ELPVVDETTTL True H1975_Epitope_Rep1 1215.62344891779 1215.62234993586 40.626 2 -2.0354188787667824 0.45576600593369737 1.0 ['ENSG00000158158|ENST00000377075|CNNM4'] 81248 25051 PKKRNHHQNV True PC9_epitope_Rep2 1256.6850356016 1256.68392993586 102.03 2 -2.0356712971963624 0.455804104096572 1.0 ['ENST00000342992.10_3_2:179563626-179566308:-|nuORF'] 112317 5264 TKYKLDAK True NCI_RA007_Epitope_Rep3 965.5545815123298 965.55348993586 27.709 2 -2.0360615076984634 0.4558373015446464 1.0 ['nc|ENSG00000120694|Q92598-2|HSPH1', 'nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 119904 7359 VDKHPVTC True NCI_RA007_Epitope_Rep1 897.43783750793 897.43674993586 32.619 2 -2.0360751577043676 0.4558373015446464 1.0 ['ZNF716|p.A84D|1|0.24|ENSG00000182111|chr7:57463157-57463157|C/A|missense_variant'] 13071 10895 DLPPGVAL True NCI_RA007_Epitope_Rep3 780.43815477776 780.43704993586 49.929 2 -2.0367965187526624 0.45587539771261504 1.0 ['ENST00000484749.5_1_1:228360905-228363211:+|nuORF', 'ENST00000546123.2_1_1:228362303-228363211:+|nuORF', 'ENSG00000181873|ENST00000366711|IBA57', 'IBA57|p.E244V|1|0.1|ENSG00000181873|chr1:228175173-228175173|A/T|missense_variant'] 46779 13465 ITFPDGRSL True PC9_epitope_Rep3 1004.5290950404799 1004.52798993586 56.843 2 -2.0369792745753785 0.45588124643943545 1.0 ['ENSG00000186160|ENST00000334194|CYP4Z1'] 11275 22614 DEGLRSLKGI True PC9_epitope_Rep6 1086.6033226099 1086.6022299358601 100.03 2 -2.0375337352061855 0.4559085925575596 1.0 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 60404 12682 LGTPLPEPRSP True NCI_RA007_Epitope_Rep1 1162.6346227381798 1162.63352993586 53.314 2 -2.0376601629157993 0.45590954039296616 1.0 ['ENST00000227471.6_3_11:67758663-67759008:-|nuORF'] 2040 24791 AEKRQALLGVI True NCI_RA007_Epitope_Rep5 1196.7241064489197 1196.72300993586 102.85 2 -2.0376689026359727 0.45590954039296616 1.0 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 103362 19956 SPPGPPRK True H1975_Epitope_Rep2 834.47118624154 834.47008993586 82.743 2 -2.0377008534308456 0.45591538850134894 1.0 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1'] 43303 22998 IFVFMFPL True H1975_Epitope_Rep3 1012.5455970517598 1012.54448993586 96.067 2 -2.0379585965545424 0.4559221840068788 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 22790 18469 ETYRQAKER True H1975_Epitope_Rep2 1179.5996342117899 1179.5979749037901 76.643 3 -2.0379604158562765 0.4559221840068788 1.0 ['ENSG00000277399|ENST00000616987|GPR179', 'nc|ENSG00000277399|Q6PRD1|GPR179', 'GPR179|p.L899Cfs*70|1|0.5|ENSG00000277399|chr17:38330874-38330874|G/-|frameshift_variant'] 65489 20601 LRLKVVKYPL True H1975_Epitope_Rep2 1227.8067138740698 1227.80506490379 85.335 3 -2.0379697422533125 0.4559221840068788 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 14627 14423 DVDAYLLQL True NCI_RA007_Epitope_Rep2 1048.54407639828 1048.5429699358601 60.764 2 -2.038180831076388 0.45592407893039855 1.0 ['ENSG00000134152|ENST00000256544|KATNBL1', 'ENST00000562413.2_1_6:147123933-147123996:-|nuORF'] 59548 10907 LFSVPGPL True PC9_epitope_Rep2 828.4745402864799 828.47344993586 47.275 2 -2.0384280892422115 0.45592407893039855 1.0 ['ENST00000236671.6_2_11:1774213-1774510:-|nuORF'] 15577 7625 EAQPQLLDLRI True H1975_Epitope_Rep2 1294.7245003717399 1294.7234099358602 34.282 2 -2.0384335797130086 0.45592407893039855 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 79800 14907 PEEQLPKT True PC9_epitope_Rep2 940.48656152216 940.48601496793 62.604 1 -2.0384610156514698 0.45592407893039855 1.0 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 15495 5381 EALYFGSDY True PC9_epitope_Rep3 1063.4498416602698 1063.4487499358602 25.771 2 -2.0385687513724178 0.45593087364450224 1.0 ['TECTA|p.D2032Ifs*79|1|0.16|ENSG00000109927|chr11:121187923-121187923|G/-|frameshift_variant', 'ENSG00000109927|ENST00000392793|TECTA', 'TECTA|p.K805Sfs*19|1|0.3|ENSG00000109927|chr11:121129679-121129679|G/-|frameshift_variant'] 64419 18330 LPNKDVYK True NCI_RA007_Epitope_Rep4 975.5389314481898 975.53782993586 79.305 2 -2.038589123940766 0.45593087364450224 1.0 ['ENSG00000174718|ENST00000312561|RESF1'] 71607 11545 MDKDGYFWFVA True PC9_epitope_Rep4 1377.60635938501 1377.6052699358602 52.17 2 -2.038664255979412 0.45593087364450224 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 44264 14690 ILAGCHPN True NCI_RA007_Epitope_Rep2 823.4010580763901 823.40050496793 61.811 1 -2.0388129710461738 0.4559444617583528 1.0 ['ENST00000442770.5_1_7:94989287-95024046:-|nuORF', 'ENSG00000105852|ENST00000265627|PON3'] 59996 14490 LGIPCWRLV True PC9_epitope_Rep5 1055.59500685567 1055.5939099358602 60.736 2 -2.0388909625177645 0.4559444617583528 1.0 ['ENST00000366711.3_1_1:228363404-228363947:+|nuORF'] 73967 3812 NCPSFALH True PC9_epitope_Rep5 887.3959726959499 887.39486993586 19.746 2 -2.038899221278775 0.4559444617583528 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 5588 11901 ANIGPLLV True PC9_epitope_Rep1 795.48543932335 795.48434993586 50.643 2 -2.0392349191090715 0.4559444617583528 1.0 ['ENSG00000101276|ENST00000645534|SLC52A3', 'nc|ENSG00000101276|Q9NQ40-2|SLC52A3'] 135826 6963 WNRDNPKI True PC9_epitope_Rep5 1041.53557740325 1041.5344899358602 31.751 2 -2.0393672681797654 0.4559444617583528 1.0 ['nc|ENSG00000116962|P14543-2|NID1', 'ENSG00000116962|ENST00000264187|NID1'] 50104 23976 KKKDHLISGLL True PC9_epitope_Rep4 1250.7710566413398 1250.76994993586 100.69 2 -2.039441460071045 0.4559444617583528 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 69742 17248 LVFEKRWLKER True H1975_Epitope_Rep1 1502.87216766494 1502.87106993586 71.806 2 -2.0395750785939724 0.45594635545955703 1.0 ['ENST00000452015.8_3_14:23767740-23768628:-|nuORF'] 50082 24755 KKGRGRYI True PC9_epitope_Rep4 976.5930327097199 976.5924849679301 103.72 1 -2.039670049402367 0.45594635545955703 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 45084 11179 IPITNTYKEF True H1975_Epitope_Rep1 1224.6390394122798 1224.6379499358602 47.968 2 -2.039711704234172 0.45594635545955703 1.0 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF', 'ENST00000468439.2_1_3:132107728-132107881:+|nuORF'] 130503 11114 VSPVTETRTYH True NCI_RA007_Epitope_Rep5 1288.6411646706001 1288.64057496793 49.385 1 -2.0397531573514738 0.45594635545955703 1.0 ['ENST00000441284.5_2_13:46917522-46942212:-|nuORF', 'nc|ENSG00000102445|Q9H714-6|RUBCNL', 'nc|ENSG00000102445|Q9H714-3|RUBCNL', 'nc|ENSG00000102445|Q9H714-4|RUBCNL', 'ENSG00000102445|ENST00000429979|RUBCNL', 'nc|ENSG00000102445|Q9H714-1|RUBCNL'] 122957 21735 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 90.715 2 -2.0398622732592653 0.45595220185260804 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 58358 10960 LENGDINRKV True H1975_Epitope_Rep1 1156.6200353032 1156.61892993586 47.122 2 -2.0399859100065623 0.4559580481200099 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 25889 19695 FFLIFIGRLV True NCI_RA007_Epitope_Rep1 1223.74305098835 1223.74194993586 80.799 2 -2.040448674542898 0.4559961315280464 1.0 ['ENST00000609590.1_1_6:167417170-167417329:+|nuORF'] 131668 14686 VTMEDFMRN True PC9_epitope_Rep4 1141.4896153806098 1141.48850993586 64.424 2 -2.0407758123725777 0.4560234684776652 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G'] 128437 9500 VPRSVAHI True NCI_RA007_Epitope_Rep5 877.5133854066898 877.5122899358599 43.175 2 -2.0411765373118285 0.4560400593152952 1.0 ['ENST00000498657.1_1_11:29747911-29748109:+|nuORF'] 72554 17169 MLLLKSLW True NCI_RA007_Epitope_Rep5 1002.59360987334 1002.5930749679301 72.813 1 -2.0414506118782163 0.4560673952053985 1.0 ['ENST00000445193.7_2_3:58303863-58303956:+|nuORF'] 38733 16023 HGGPGAWE True PC9_epitope_Rep2 809.34565137525 809.34454993586 66.886 2 -2.041590923582959 0.4560790845108258 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 4896 24234 ALFAAFWFRI True PC9_epitope_Rep4 1240.6756997045197 1240.6746099358602 101.7 2 -2.0417766048116297 0.4560790845108258 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-3|MBOAT1'] 79854 7921 PEKAPPAAP True PC9_epitope_Rep4 876.4705175351999 876.46942993586 37.898 2 -2.041959254631931 0.4560956740377796 1.0 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'ENST00000587856.1_1_17:43318772-43319102:+|nuORF'] 63996 15796 LNWFHRNI True PC9_epitope_Rep4 1098.5722972651402 1098.57120993586 68.684 2 -2.04205281082631 0.45610151826103773 1.0 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 19218 5768 ELINEELETFN True NCI_RA007_Epitope_Rep2 1349.63507623065 1349.63396993586 27.053 2 -2.042163189755861 0.45610736235870547 1.0 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'DMD|p.H1690Tfs*31|1|0.14|ENSG00000198947|chrX:32364668-32364668|G/-|frameshift_variant', 'DMD|p.G1635Efs*4|1|0.07|ENSG00000198947|chrX:32365141-32365141|C/-|frameshift_variant'] 71562 14890 MCCALWVSGI True NCI_RA007_Epitope_Rep5 1081.4758798927699 1081.4747899358601 63.944 2 -2.0425724666675222 0.4561083055764478 1.0 ['ENST00000436880.2_1_1:198868126-198868372:-|nuORF'] 92078 19223 RKVQLLPSRQ True NCI_RA007_Epitope_Rep5 1223.74623887583 1223.7445949037901 80.806 3 -2.0426320567799414 0.4561083055764478 1.0 ['POM121|p.R515Q|1|0.19|ENSG00000196313|chr7:72939949-72939949|G/A|missense_variant'] 74609 23766 NGGPKAAKKKK True NCI_RA007_Epitope_Rep3 1125.6982260542497 1125.6971299358602 103.01 2 -2.0430931485889205 0.45611414941281386 1.0 ['ENST00000532854.1_10:47241805-47241907:-|nuORF'] 37443 23313 GVTLGRHRRR True PC9_epitope_Rep2 1206.71700443622 1206.71647496793 95.149 1 -2.043165626986893 0.4561414818635035 1.0 ['ENST00000493449.5_1_16:322367-324481:-|nuORF'] 75309 10027 NILEPFCLAN True NCI_RA007_Epitope_Rep4 1132.5586809165998 1132.55758993586 45.412 2 -2.043609178711352 0.45617258087042467 1.0 ['ENSG00000118961|ENST00000237822|LDAH', 'nc|ENSG00000118961|Q9H6V9-2|LDAH', 'nc|ENSG00000118961|Q9H6V9-4|LDAH', 'nc|ENSG00000118961|Q9H6V9-3|LDAH'] 135841 22249 WPCCAGRL True PC9_epitope_Rep4 904.4047635578398 904.40366993586 93.819 2 -2.0438204710374652 0.45617258087042467 1.0 ['ENST00000515183.5_1_4:2826457-2831225:+|nuORF'] 135467 18849 WIFFIMVFV True NCI_RA007_Epitope_Rep4 1200.64056006576 1200.63892490379 81.527 3 -2.043821520582301 0.45617258087042467 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 91294 21172 RGPQAHLV True PC9_epitope_Rep6 876.49298431528 876.49188993586 94.284 2 -2.044051381635208 0.45617258087042467 1.0 ['ENSG00000163283|ENST00000392027|ALPP', 'ENSG00000163286|ENST00000295453|ALPG', 'ENSG00000163295|ENST00000295463|ALPI'] 74585 23099 NGEQIIRRR True PC9_epitope_Rep1 1140.64758746372 1140.64648993586 93.652 2 -2.044153602072164 0.45617258087042467 1.0 ['TRPS1|p.L1197*|1|0.13|ENSG00000104447|chr8:115414281-115414281|G/-|frameshift_variant', 'nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'TRPS1|p.N1276Kfs*5|1|0.39|ENSG00000104447|chr8:115414041-115414042|-/T|frameshift_variant', 'ENSG00000104447|ENST00000395715|TRPS1'] 112259 19763 TKRKEVKRY True H1975_Epitope_Rep1 1206.71968977482 1206.71858993586 82.25 2 -2.0442971598313324 0.45617258087042467 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 32279 22639 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 94.263 2 -2.044377990485301 0.45617258087042467 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 94109 19294 RRLLQNRRLD True NCI_RA007_Epitope_Rep3 1338.79564867974 1338.79454993586 84.239 2 -2.044533733035438 0.45617258087042467 1.0 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2'] 8247 9488 ATGPSAHEE True H1975_Epitope_Rep2 897.3828247296101 897.38227496793 41.464 1 -2.044692042451038 0.45617258087042467 1.0 ['DCAF6|p.G730Vfs*5|1|0.18|ENSG00000143164|chr1:168065609-168065609|G/-|frameshift_variant', 'nc|ENSG00000143164|Q58WW2|DCAF6', 'nc|ENSG00000143164|Q58WW2-2|DCAF6', 'nc|ENSG00000143164|Q58WW2-4|DCAF6', 'ENSG00000143164|ENST00000367840|DCAF6'] 63833 24463 LNKHRRYEIRM True PC9_epitope_Rep4 1514.82523455586 1514.8241299358601 102.58 2 -2.0449289020874377 0.4561891665413291 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 12465 25142 DIYNHRFHR True PC9_epitope_Rep5 1256.61628733544 1256.6151899358601 101.85 2 -2.0450307200319426 0.4561959499382285 1.0 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15'] 80298 3430 PGFEGPRC True PC9_epitope_Rep6 861.3803226318099 861.3792299358599 19.364 2 -2.0450432501254348 0.4561959499382285 1.0 ['ENSG00000204301|ENST00000375023|NOTCH4'] 94257 20509 RRQSHLPPI True H1975_Epitope_Rep3 1102.6359601508598 1102.63486993586 85.729 2 -2.0450663681857186 0.4561959499382285 1.0 ['ENST00000283635.7_2_2:87016528-87018429:-|nuORF', 'ENST00000352580.7_2_2:87013010-87017728:-|nuORF', 'ENST00000409781.1_1_2:87016528-87017758:-|nuORF'] 13142 12486 DLREKQQEVLH True H1975_Epitope_Rep3 1393.73137665733 1393.7302699358602 53.222 2 -2.045192868269135 0.4561987732433855 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'ENST00000479369.6_1_1:144864133-144875987:-|nuORF', 'ENST00000420737.1_1:146011237-146016889:+|nuORF'] 92640 24967 RNHVNIRYVA True PC9_epitope_Rep2 1240.6788875920001 1240.6777899358601 101.7 2 -2.045392295742018 0.4561987732433855 1.0 ['ENST00000598377.2_2_19:53716896-53717031:+|nuORF'] 46960 20435 ITPGLSRLS True PC9_epitope_Rep1 942.54983048506 942.54872993586 83.415 2 -2.045424407038469 0.4561987732433855 1.0 ['ENST00000398998.1_2_21:38610885-38639768:-|nuORF'] 95370 17919 RVWFREPPA True NCI_RA007_Epitope_Rep3 1156.61416207712 1156.61306993586 78.52 2 -2.0454908325013634 0.4561987732433855 1.0 ['ENSG00000184601|ENST00000557649|C14orf180'] 109009 7607 TAHHISPER True NCI_RA007_Epitope_Rep1 1046.52574099554 1046.52464993586 33.581 2 -2.0455523921733194 0.4561987732433855 1.0 102412 24825 SLTLLRKKVW True H1975_Epitope_Rep2 1242.7812274022199 1242.77959490379 102.05 3 -2.0455548063586266 0.4561987732433855 1.0 ['ENST00000508678.1_1_5:14681688-14687767:+|nuORF'] 31209 22187 GCGHRTAR True H1975_Epitope_Rep2 856.40860306832 856.40750993586 91.696 2 -2.045757037078023 0.4561997142642304 1.0 ['ENSG00000077009|ENST00000168977|NMRK2', 'nc|ENSG00000077009|Q9NPI5-3|NMRK2'] 120150 14488 VEALPRPVP True PC9_epitope_Rep3 976.5705659296399 976.56946993586 60.842 2 -2.045793078494386 0.4561997142642304 1.0 ['ENSG00000011275|ENST00000389902|RNF216', 'nc|ENSG00000011275|Q9NWF9|RNF216', 'nc|ENSG00000011275|Q9NWF9-3|RNF216'] 39354 24151 HKEEWIRW True PC9_epitope_Rep3 1182.5934266325398 1182.59179490379 98.184 3 -2.0459583303914273 0.45621139696009455 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 133508 23674 VWKLSALT True PC9_epitope_Rep6 916.5382031721999 916.53765496793 104.22 1 -2.046080212258532 0.45621139696009455 1.0 ['ENST00000344423.9_1_8:28205359-28205527:-|nuORF'] 123173 9297 VGLAAEPI True NCI_RA007_Epitope_Rep3 768.43815477776 768.43704993586 43.675 2 -2.0463612454198628 0.4562387213199278 1.0 ['ENST00000582625.1_1_17:77043224-77044167:+|nuORF'] 49057 17150 KEHLDTLNKKK True NCI_RA007_Epitope_Rep3 1352.7775985737596 1352.77650993586 75.342 2 -2.0465706175726495 0.4562553036080647 1.0 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 124260 23283 VGTKRDLR True PC9_epitope_Rep2 943.5563128478299 943.55576496793 95.041 1 -2.046660908152358 0.4562611441706589 1.0 ['ENST00000578535.1_1_18:22265891-22265996:-|nuORF'] 16708 5138 EERVFPAS True NCI_RA007_Epitope_Rep2 933.4555957470499 933.45448993586 24.605 2 -2.046742311557618 0.4562620837808808 1.0 ['ENST00000566475.1_1_6:31022164-31027375:+|nuORF'] 10489 18188 CITPKRRLTR True H1975_Epitope_Rep2 1242.7342942931398 1242.73264490379 75.392 3 -2.0467758562479323 0.4562620837808808 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 128621 20479 VPVDQTNKRD True PC9_epitope_Rep3 1170.59929985862 1170.59820993586 84.031 2 -2.0469130403867912 0.45628940612882785 1.0 ['HERC6|p.I845V|1|0.47|ENSG00000138642|chr4:88437759-88437759|A/G|missense_variant'] 25504 14361 FEGIGVVLPLE True H1975_Epitope_Rep1 1171.64887581999 1171.6477699358602 60.433 2 -2.0469737608888363 0.4562952460741982 1.0 ['nc|ENSG00000180773|Q6YBV0-2|SLC36A4', 'ENSG00000180773|ENST00000326402|SLC36A4', 'ENST00000526735.1_1_11:92887247-92899179:-|nuORF'] 29043 14819 FTESKRKL True PC9_epitope_Rep5 1007.5763795860698 1007.57528993586 62.001 2 -2.0473798851675538 0.45632840694277366 1.0 ['ENST00000446957.6_2_13:33110995-33111067:-|nuORF'] 97034 14011 SCQTDDTWRTE True H1975_Epitope_Rep1 1340.5302938922798 1340.5291899358601 59.054 2 -2.047468654022294 0.45632840694277366 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2'] 122948 20479 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 85.718 2 -2.047612686393017 0.45632934504758016 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 94220 23434 RRPRTRRNL True PC9_epitope_Rep1 1223.74355353723 1223.7424499358601 94.922 2 -2.0476327800258356 0.45632934504758016 1.0 ['nc|ENSG00000164125|Q6UWH4-2|GASK1B', 'ENSG00000164125|ENST00000585682|GASK1B', 'nc|ENSG00000164125|Q6UWH4-3|GASK1B'] 86386 6175 QKELEEVCNP True H1975_Epitope_Rep1 1187.5492384317097 1187.54814993586 28.821 2 -2.0478622164170006 0.4563302831120849 1.0 ['ENST00000448737.1_1_X:123338433-123338700:-|nuORF'] 122954 21219 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 88.655 2 -2.047994128393607 0.4563302831120849 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 112216 18516 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 81.025 2 -2.048671840678995 0.45635270110621845 1.0 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 36390 5513 GVFIIERET True PC9_epitope_Rep3 1062.57095985246 1062.5698699358602 26.284 2 -2.04881557561659 0.45635270110621845 1.0 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF', 'nc|ENSG00000039068|P12830-2|CDH1', 'ENST00000567320.1_1_16:68842461-68842763:+|nuORF'] 7284 6639 AREERRWCWIW True H1975_Epitope_Rep1 1589.7673853265699 1589.7657449037902 30.59 3 -2.048961722720965 0.45635363862874817 1.0 ['ENST00000482384.1_1_1:109756594-109756711:+|nuORF'] 59495 23265 LFRGKMVSYI True PC9_epitope_Rep4 1212.6689000719198 1212.66837496793 97.742 1 -2.04908426366091 0.45635363862874817 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 100346 2442 SKPKYYFAWT True NCI_RA007_Epitope_Rep2 1289.6444591458899 1289.64280490379 13.363 3 -2.0491227987862297 0.45635947719437675 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-2|MBOAT1'] 95538 10817 RWRRPQQVTH True PC9_epitope_Rep5 1362.73813380362 1362.7370299358602 46.597 2 -2.049327108878301 0.4563653156345984 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'OCA2|p.Q609Pfs*8|1|0.13|ENSG00000104044|chr15:27955176-27955177|-/T|frameshift_variant', 'nc|ENSG00000104044|Q04671-2|OCA2'] 135677 25618 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 108.31 3 -2.049479144474919 0.45638773143176253 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 31234 19367 GDCGKRFS True NCI_RA007_Epitope_Rep5 868.38613628824 868.38502993586 81.379 2 -2.0495668593243197 0.45638773143176253 1.0 ['ENSG00000236609|ENST00000457543|ZNF853', 'ZNF235|p.C433Y|1|0.24|ENSG00000159917|chr19:44288137-44288137|C/T|missense_variant', 'nc|ENSG00000159917|Q14590-2|ZNF235', 'ENSG00000159917|ENST00000291182|ZNF235'] 80553 8452 PGPLSKQGS True PC9_epitope_Rep5 869.46068112749 869.45958993586 37.453 2 -2.049707205867208 0.4564218213058419 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 49807 23660 KHLQKQEGA True PC9_epitope_Rep4 1037.5617921510898 1037.5606899358602 99.353 2 -2.049753212409541 0.4564218213058419 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant'] 11794 23218 DHELGKYK True PC9_epitope_Rep6 988.4977949122 988.49668993586 102.41 2 -2.0499910298881416 0.4564218213058419 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1'] 91876 18480 RKKRFEKQ True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 80.868 2 -2.050073543729473 0.4564218213058419 1.0 ['ENSG00000164695|ENST00000297265|CHMP4C'] 111996 19126 TIRLKVSSTA True NCI_RA007_Epitope_Rep2 1074.63970811862 1074.6386099358601 79.261 2 -2.050158906432595 0.4564276586376865 1.0 ['LDLR|p.V727I|1|0.24|ENSG00000130164|chr19:11123212-11123212|G/A|missense_variant'] 40370 13482 HQSKKWRIQA True H1975_Epitope_Rep3 1280.71018772028 1280.7090899358602 57.134 2 -2.0505681986428463 0.4564295302013423 1.0 ['nc|nan|Q8N5N4-2|C3orf22', 'ENSG00000180697|ENST00000318225|C3orf22'] 123523 23458 VGPLIPEQ True H1975_Epitope_Rep1 851.4752685624701 851.47472496793 97.481 1 -2.0506769018504274 0.4564295302013423 1.0 ['ENSG00000181652|ENST00000639579|ATG9B', 'ATG9B|p.L261Cfs*64|1|0.14|ENSG00000181652|chr7:151023085-151023085|G/-|frameshift_variant', 'nc|ENSG00000181652|Q674R7-3|ATG9B'] 135520 25549 WKKGRQQI True PC9_epitope_Rep3 1042.60359739342 1042.60250993586 103.76 2 -2.0507344415789355 0.4564295302013423 1.0 ['ENST00000479647.1_1_3:196664263-196668636:-|nuORF'] 11655 22561 DGPGNTLAH True H1975_Epitope_Rep2 880.4038945273601 880.40278993586 93.213 2 -2.050841592050911 0.4564295302013423 1.0 ['ENST00000533366.5_1_11:102395628-102401431:-|nuORF', 'ENSG00000137673|ENST00000260227|MMP7'] 68565 23036 LTGSVPVHAKT True PC9_epitope_Rep6 1108.6240580544797 1108.62296993586 101.71 2 -2.050965107879555 0.45643536713699717 1.0 ['ENST00000467936.5_1_3:45542057-45579920:+|nuORF', 'ENSG00000011376|ENST00000645846|LARS2'] 3150 11537 AGDGRSAS True NCI_RA007_Epitope_Rep1 719.31983055023 719.31928496793 48.844 1 -2.051182167366199 0.45645381237182037 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.V841Cfs*5|1|0.1|ENSG00000155897|chr8:130836431-130836431|C/-|frameshift_variant'] 80529 8030 PGPHGPNG True PC9_epitope_Rep6 731.33508669155 731.33453496793 40.371 1 -2.051197451935819 0.45645381237182037 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 47595 20940 IVVSGVERA True PC9_epitope_Rep1 928.5341804209199 928.53308993586 85.366 2 -2.0511974584107238 0.45645381237182037 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 141898 15429 YVDVPMTSQQ True H1975_Epitope_Rep1 1166.52777471114 1166.5266699358601 64.618 2 -2.0512962252578983 0.45645381237182037 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 102424 16159 SLTPAPPAL True PC9_epitope_Rep4 865.49091862661 865.49037496793 70.097 1 -2.0513124000249667 0.45645381237182037 1.0 ['ENSG00000187942|ENST00000344642|LDLRAD2'] 59001 10000 LEVLDPRTP True H1975_Epitope_Rep2 1038.57095985246 1038.5698699358602 43.455 2 -2.0514634635730173 0.45645964867070393 1.0 ['TGM4|p.V76E|1|0.4|ENSG00000163810|chr3:44887722-44887722|T/A|missense_variant'] 82496 11849 PPRFTKGL True NCI_RA007_Epitope_Rep3 914.5337864980999 914.53268993586 53.73 2 -2.0515175416199276 0.456465484844255 1.0 ['ENSG00000118946|ENST00000377918|PCDH17', 'PCDH17|p.V478L|1|0.52|ENSG00000118946|chr13:57633978-57633978|G/T|missense_variant', 'nc|ENSG00000118946|O14917-2|PCDH17', 'PCDH17|p.N1014Tfs*6|1|0.36|ENSG00000118946|chr13:57724852-57724852|C/-|frameshift_variant', 'PCDH17|p.E1137Kfs*3|1|0.13|ENSG00000118946|chr13:57725222-57725222|G/-|frameshift_variant'] 115978 12775 TSIWRLSL True NCI_RA007_Epitope_Rep4 974.5549158654999 974.55380993586 56.2 2 -2.0515796345181605 0.45646641971331936 1.0 ['ENST00000369937.4_1_10:104184442-104184541:-|nuORF'] 52391 14680 KKLRHLLLPSE True H1975_Epitope_Rep3 1332.82415484336 1332.8224949037901 61.836 3 -2.051583251475739 0.45646641971331936 1.0 ['ENST00000201979.2_1_20:30064033-30064156:+|nuORF'] 77087 23434 NRLKIVAWYS True NCI_RA007_Epitope_Rep3 1248.69789170108 1248.6967899358601 101.72 2 -2.0518880412515683 0.45649256535509153 1.0 ['ENST00000308973.8_1_4:38777911-38777989:-|nuORF'] 125012 18872 VIAHCGMH True H1975_Epitope_Rep3 866.3891134937 866.3880099358599 79.16 2 -2.0521148397110722 0.45649256535509153 1.0 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L'] 130376 20774 VSLAGARR True PC9_epitope_Rep2 828.49298431528 828.49188993586 85.349 2 -2.052292017730551 0.45649256535509153 1.0 ['ENST00000596597.5_1_19:58757693-58758161:+|nuORF', 'ENST00000598880.5_1_19:58740873-58772232:+|nuORF'] 105961 11708 SSSSGGKK True NCI_RA007_Epitope_Rep2 736.37153176992 736.3709849679301 50.138 1 -2.0524444286507624 0.45649256535509153 1.0 ['ENSG00000204209|ENST00000374542|DAXX', 'nc|ENSG00000204209|Q9UER7-5|DAXX', 'nc|ENSG00000204209|Q9UER7-4|DAXX', 'nc|ENSG00000204209|Q9UER7-2|DAXX'] 67282 5696 LSRSATAAL True NCI_RA007_Epitope_Rep5 888.5028802926399 888.50178993586 28.596 2 -2.052509046440466 0.45649256535509153 1.0 ['ENST00000586076.1_1_17:73872457-73872589:+|nuORF'] 15710 9513 EAWLLLPFFKV True H1975_Epitope_Rep3 1361.77474503945 1361.77364993586 41.597 2 -2.052731016033959 0.45649256535509153 1.0 ['ENST00000461417.5_1_2:220110721-220111658:+|nuORF'] 27663 7343 FPGARAVA True PC9_epitope_Rep5 787.4340724568299 787.43296993586 33.205 2 -2.052835831781512 0.45649256535509153 1.0 ['ENST00000602529.1_1_1:228463365-228463719:-|nuORF'] 84066 23234 PVYRGFWAVL True PC9_epitope_Rep1 1206.6549642599398 1206.65386993586 94.16 2 -2.052845492854166 0.45649256535509153 1.0 ['ENST00000484094.1_1_2:103414278-103431424:+|nuORF'] 66066 11924 LSEHVVQG True H1975_Epitope_Rep3 867.4450310633499 867.4444849679301 51.018 1 -2.052915212769919 0.45649256535509153 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1'] 10449 14881 CHVYRLLFF True PC9_epitope_Rep5 1196.6164705762396 1196.6148149037901 62.244 3 -2.052988396780366 0.45649256535509153 1.0 ['nc|ENSG00000105711|Q07699-2|SCN1B', 'ENSG00000105711|ENST00000262631|SCN1B'] 10847 8672 CVALDWLA True PC9_epitope_Rep1 889.43677487877 889.43566993586 38.196 2 -2.0530872155346556 0.45649840036072403 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 10518 25145 CLACHKKC True PC9_epitope_Rep5 904.40813468612 904.40702993586 101.86 2 -2.05330335005399 0.4565042352410706 1.0 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45', 'STK11-HMHA1|1|fusion'] 93906 26237 RRFPKKWERPV True PC9_epitope_Rep1 1497.8680853440098 1497.8664449037901 106.31 3 -2.053451519156785 0.4565159046259219 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 133186 26846 VVRRRDRKDLL True PC9_epitope_Rep3 1424.8688136199996 1424.8677099358601 110.17 2 -2.0534736536377265 0.4565159046259219 1.0 ['CDC73|p.P89R|1|0.2|ENSG00000134371|chr1:193130202-193130202|C/G|missense_variant'] 73983 7159 NDDFELTPI True PC9_epitope_Rep1 1062.48695544498 1062.4858499358602 32.348 2 -2.053973618153498 0.45651963888918706 1.0 ['ENSG00000101745|ENST00000262126|ANKRD12', 'nc|ENSG00000101745|Q6UB98-2|ANKRD12'] 30071 5147 FYHPEETKLG True NCI_RA007_Epitope_Rep2 1219.5873381925899 1219.58624993586 24.64 2 -2.05416134946468 0.45651963888918706 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 71592 4420 MDEKGKQRNRR True PC9_epitope_Rep1 1416.7368134742796 1416.73516490379 21.887 3 -2.0542004202486996 0.45651963888918706 1.0 ['ENSG00000100941|ENST00000216832|PNN'] 45361 15715 IQDLLELSPPE True PC9_epitope_Rep2 1252.6550833992399 1252.6539899358602 65.722 2 -2.0542862943361415 0.45651963888918706 1.0 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 138244 24303 YGTQGKPA True PC9_epitope_Rep3 820.4079172786398 820.40682993586 98.795 2 -2.0543231193934997 0.45651963888918706 1.0 ['ENSG00000107779|ENST00000372037|BMPR1A', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF'] 81689 8590 PLLVKVKAQ True PC9_epitope_Rep3 994.65390163078 994.65280993586 37.993 2 -2.054342113112341 0.45651963888918706 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 24933 20929 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 87.504 2 -2.054393238385107 0.45651963888918706 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF'] 115505 24185 TRRHKGKP True PC9_epitope_Rep4 978.5835306551799 978.58242993586 101.51 2 -2.054461454594769 0.45651963888918706 1.0 ['ENST00000306108.9_1_2:29092926-29092998:-|nuORF'] 114946 7444 TQTPDRHW True H1975_Epitope_Rep2 1039.4835418303899 1039.4824499358601 33.578 2 -2.0547924139594693 0.4565362073037206 1.0 ['ENST00000601247.5_1_19:17858586-17877404:+|nuORF'] 100284 21313 SKACHLRT True PC9_epitope_Rep5 914.47561999898 914.47452993586 87.034 2 -2.0550856176483423 0.4565429739912624 1.0 ['ENSG00000283039|ENST00000634670|KLF18'] 59471 13113 LFQIDVSEFRY True H1975_Epitope_Rep3 1415.70851595443 1415.7074099358601 55.685 2 -2.0551665750235064 0.4565429739912624 1.0 ['ENST00000531971.1_1_11:118657164-118657236:-|nuORF'] 48761 26281 KDKLLRLKL True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 106.89 3 -2.0551933553127544 0.4565429739912624 1.0 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'nc|ENSG00000119321|Q5T1M5-3|FKBP15'] 122683 14483 VGGGALAP True PC9_epitope_Rep3 640.3544251538 640.3538749679301 60.819 1 -2.0553266445337037 0.45656537466590813 1.0 ['ENST00000421890.5_1_7:5862807-5863047:+|nuORF'] 93689 20379 RQTQLLLR True H1975_Epitope_Rep2 1026.62981214126 1026.6287099358601 84.448 2 -2.055405533566679 0.45656537466590813 1.0 ['ENST00000221980.4_1_19:10403354-10403878:+|nuORF'] 685 12662 AATVVVLRV True PC9_epitope_Rep2 926.5913013742198 926.59020993586 54.011 2 -2.055555541969 0.45657797288739577 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 114279 18825 TPPMGDVH True NCI_RA007_Epitope_Rep5 852.37998827864 852.37888993586 79.253 2 -2.0556793168310463 0.45657797288739577 1.0 ['ENSG00000117016|ENST00000372684|RIMS3'] 75978 8642 NLVESAVP True PC9_epitope_Rep6 827.4388830537499 827.43778993586 43.063 2 -2.0557524193069603 0.45657797288739577 1.0 ['ENST00000420642.1_7:74765936-74789271:+|nuORF', 'nc|ENSG00000274523|Q96I51-3|RCC1L', 'ENSG00000274523|ENST00000610322|RCC1L'] 18584 24370 EKQNKPQK True PC9_epitope_Rep2 998.5508931142198 998.54978993586 99.307 2 -2.055776230610537 0.45657797288739577 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 100374 15831 SKTSGKAK True H1975_Epitope_Rep3 805.4657665079299 805.46466993586 66.342 2 -2.055855260414403 0.45658076910693013 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 118115 16484 TYHMWWVCFWH True H1975_Epitope_Rep3 1594.66383177482 1594.6627299358602 68.897 2 -2.0558598873910428 0.45658076910693013 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 36768 9603 GVKPWSNIME True PC9_epitope_Rep4 1159.5695799534699 1159.56793490379 44.562 3 -2.055892847837409 0.45658076910693013 1.0 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'FHOD3|p.D1283Ifs*19|1|0.62|ENSG00000134775|chr18:36755307-36755307|C/-|frameshift_variant', 'ENSG00000134775|ENST00000590592|FHOD3', 'ENST00000591635.5_1_18:34124550-34298500:+|nuORF', 'FHOD3|p.D558Ifs*27|1|0.19|ENSG00000134775|chr18:36709101-36709101|C/-|frameshift_variant', 'ENST00000589114.5_1_18:33877702-34289359:+|nuORF'] 128999 26378 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 107.34 2 -2.0559670817459654 0.45658076910693013 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 684 13513 AATVVVLRV True PC9_epitope_Rep1 926.5913013742198 926.59020993586 56.834 2 -2.056019482791505 0.45658076910693013 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 136099 4868 WRLLKNYYKWS True NCI_RA007_Epitope_Rep5 1555.82996849979 1555.8288699358602 25.418 2 -2.0560720747120627 0.45658076910693013 1.0 ['TTPA|p.R77S|1|0.19|ENSG00000137561|chr8:63073062-63073062|T/A|missense_variant'] 37430 18104 GVTGTGPT True H1975_Epitope_Rep3 688.33916901248 688.3386249679301 75.843 1 -2.0561504596936357 0.4565817011000805 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENST00000488424.5_1_1:182775343-182783943:+|nuORF'] 127718 8890 VPAPRGVPAS True PC9_epitope_Rep1 949.5345147740899 949.53340993586 39.035 2 -2.056180607367692 0.4565817011000805 1.0 ['ENST00000283635.7_2_2:87016528-87018429:-|nuORF', 'ENST00000352580.7_2_2:87013010-87017728:-|nuORF'] 76353 5737 NPWRWDQA True PC9_epitope_Rep1 1071.48862721083 1071.48752993586 26.885 2 -2.056439521650971 0.45658846508832557 1.0 ['LTR12C_dup1159|chr6:63441884-63443495:-|1.4512251268435548|0.0180559155246374|6.33|493.0|76|2|anti-sense'] 27776 21006 FPYLFQLLED True NCI_RA007_Epitope_Rep5 1283.64379043955 1283.64214490379 87.809 3 -2.0564561531600734 0.45658846508832557 1.0 ['nc|ENSG00000178922|Q5T013-2|HYI', 'ENST00000372427.5_1_1:43917099-43918100:-|nuORF', 'nc|ENSG00000178922|Q5T013-4|HYI', 'nc|ENSG00000178922|Q5T013-3|HYI', 'nc|ENSG00000178922|Q5T013|HYI'] 135188 7718 WERDGAPSPMM True NCI_RA007_Epitope_Rep3 1275.5376282021898 1275.53652993586 37.481 2 -2.056495718983009 0.45658846508832557 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 75714 25044 NLKLKKPP True H1975_Epitope_Rep2 936.6120368188 936.61092993586 102.91 2 -2.0567544047295283 0.4566157610620419 1.0 ['ENST00000593607.1_1_19:54120057-54120405:+|nuORF', 'ENST00000510556.1_1_4:109571811-109578607:+|nuORF', 'ENST00000424397.2_1_4:113606219-113606393:+|nuORF', 'ENSG00000198856|ENST00000361564|OSTC', 'nc|ENSG00000198856|Q9NRP0-2|OSTC'] 141165 10106 YSTFLKKR True H1975_Epitope_Rep1 1041.5971150306498 1041.5960099358601 43.811 2 -2.0573668136804395 0.4566645202833226 1.0 ['L1PA5_dup5182|chr7:103244597-103250743:+|1.105246154897388|0.1498924924111866|2.88|531.0|71|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|84|2|sense', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|118|3|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|31|2|sense', 'L1PA5_dup8776|chr12:56969221-56973772:+|1.0141762103874987|0.0684301569328371|3.89|527.0|66|2|sense'] 122936 17624 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 77.278 2 -2.0577402989074867 0.4566934203184686 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 97339 9274 SEAWVPDS True H1975_Epitope_Rep3 889.3817621004499 889.3806699358599 40.666 2 -2.057886253662375 0.4566934203184686 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 112217 18597 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 81.365 2 -2.057970530647127 0.4566934203184686 1.0 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 3694 9294 AGRHGSRGLV True PC9_epitope_Rep4 1008.5577098301599 1008.55660993586 43.356 2 -2.058217321274516 0.4566934203184686 1.0 ['ENST00000306749.3_1_17:80047580-80048309:-|nuORF'] 81569 15408 PLKKSPSA True NCI_RA007_Epitope_Rep5 826.4912529797799 826.49014993586 65.967 2 -2.0582532550772816 0.4566934203184686 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-4|INPP5F'] 11613 10938 DGGTVWLEVL True NCI_RA007_Epitope_Rep1 1087.5549754351498 1087.5538699358601 46.539 2 -2.0585863476272426 0.4566934203184686 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2'] 48738 6481 KDEVRYEVNCS True H1975_Epitope_Rep3 1340.6030649097197 1340.60196993586 29.897 2 -2.058777958600894 0.4566934203184686 1.0 ['GCNT4|p.F378Sfs*21|1|0.19|ENSG00000176928|chr5:75028905-75028905|A/-|frameshift_variant', 'ENSG00000176928|ENST00000652361|GCNT4'] 20452 24139 EPHAAFYA True NCI_RA007_Epitope_Rep5 904.40791727864 904.40682993586 100.26 2 -2.0590822366446764 0.4566934203184686 1.0 ['ENSG00000126583|ENST00000263431|PRKCG', 'nc|ENSG00000126583|P05129-2|PRKCG'] 95533 23295 RWRMLIQQF True PC9_epitope_Rep4 1276.6862814715598 1276.68518993586 97.858 2 -2.059203818195404 0.4566934203184686 1.0 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'ENST00000514708.5_1_4:1309356-1332271:+|nuORF', 'ENST00000515766.1_1_4:1326530-1330951:+|nuORF', 'ENST00000506530.5_1_4:1326530-1332660:+|nuORF'] 47665 17909 IWPSWRPQK True PC9_epitope_Rep2 1196.6454622054 1196.6443699358601 74.192 2 -2.05923557572227 0.4566934203184686 1.0 ['ENST00000458207.5_1_1:39994707-40002877:-|nuORF', 'ENST00000450157.5_1_1:39990647-40007421:-|nuORF', 'ENST00000431553.5_1_1:39994707-40007499:-|nuORF', 'ENST00000417869.5_1_1:39988131-40011420:-|nuORF'] 46946 18630 ITPEIKHF True PC9_epitope_Rep1 983.5440168286299 983.54290993586 76.448 2 -2.0592622395411597 0.4566934203184686 1.0 ['ENSG00000101605|ENST00000356443|MYOM1', 'nc|ENSG00000101605|P52179-2|MYOM1'] 122015 11978 VFVLPFPV True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 52.733 2 -2.0592622713782793 0.4566934203184686 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 125953 7545 VLDEVSEVYFL True NCI_RA007_Epitope_Rep1 1311.65983442651 1311.65872993586 33.342 2 -2.0593712629913172 0.4566934203184686 1.0 ['ENST00000470731.5_1_7:2598728-2641152:+|nuORF'] 123120 9797 VGKLVTLR True NCI_RA007_Epitope_Rep5 884.58073669052 884.57962993586 44.332 2 -2.0593737113395973 0.4566934203184686 1.0 ['nc|ENSG00000064607|Q8IX01-4|SUGP2', 'nc|ENSG00000064607|Q8IX01-3|SUGP2', 'ENSG00000064607|ENST00000452918|SUGP2'] 126624 6885 VLNENNVPL True PC9_epitope_Rep2 1010.53965972418 1010.53856993586 31.884 2 -2.0594965406654335 0.4566934203184686 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 63866 14884 LNMDVKVSYK True NCI_RA007_Epitope_Rep5 1195.6270948295899 1195.6265749679299 63.921 1 -2.0595736424159417 0.4566934203184686 1.0 ['CON__Q1A7A4'] 13600 22050 DPGLRGPLHW True NCI_RA007_Epitope_Rep3 1146.5934266325398 1146.59179490379 95.805 3 -2.0598370250649065 0.4567109089153317 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 14544 24959 DTRRWKKKQ True PC9_epitope_Rep3 1244.7101877202797 1244.7090899358602 101.36 2 -2.0599259104716414 0.4567109089153317 1.0 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1'] 70913 8271 LYFALSRYL True PC9_epitope_Rep5 1144.62808080576 1144.62643490379 36.756 3 -2.060082330675057 0.4567109089153317 1.0 ['CNGA4|p.S184I|1|0.53|ENSG00000132259|chr11:6240345-6240345|G/T|missense_variant', 'nc|ENSG00000132259|Q8IV77-2|CNGA4', 'ENSG00000132259|ENST00000379936|CNGA4'] 11654 20456 DGPGNTLAH True H1975_Epitope_Rep2 880.4038945273601 880.40278993586 84.747 2 -2.06052844379151 0.4567381974248927 1.0 ['ENST00000533366.5_1_11:102395628-102401431:-|nuORF', 'ENSG00000137673|ENST00000260227|MMP7'] 174 11076 AAEAELAAAQR True NCI_RA007_Epitope_Rep5 1099.5621860739097 1099.56108993586 49.237 2 -2.0606602008210477 0.4567498551533229 1.0 ['ENSG00000130702|ENST00000252999|LAMA5'] 135339 18264 WGLAAGGG True H1975_Epitope_Rep2 687.33402406239 687.3334749679301 75.721 1 -2.0606648342594247 0.4567498551533229 1.0 ['nc|ENSG00000183688|Q8N5W9|RFLNB'] 119549 13927 VASSEAVAEK True H1975_Epitope_Rep3 989.5029398622898 989.5023949679301 58.884 1 -2.060765660935067 0.45676032313089376 1.0 ['ENSG00000135631|ENST00000486777|RAB11FIP5', 'nc|ENSG00000135631|Q9BXF6|RAB11FIP5', 'ENST00000479196.1_1_2:73308605-73315425:-|nuORF', 'ENST00000493523.2_1_2:73302651-73316730:-|nuORF'] 122932 15498 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 68.52 2 -2.0609538996004537 0.45676032313089376 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 516 10679 AAPEEEDE True NCI_RA007_Epitope_Rep4 888.3348714776799 888.33376993586 47.925 2 -2.0611092641135325 0.45676032313089376 1.0 ['ENSG00000185352|ENST00000376705|HS6ST3'] 26649 16386 FIQHLRTV True PC9_epitope_Rep3 1012.5817993196799 1012.58070993586 68.167 2 -2.0614599041622985 0.45676032313089376 1.0 ['MTTP|p.A339V|1|0.2|ENSG00000138823|chr4:99597173-99597173|C/T|missense_variant'] 37940 25400 HAAAPGGG True H1975_Epitope_Rep3 636.2979729068401 636.29742496793 105.67 1 -2.061560985104126 0.45676032313089376 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 59750 11169 LGDSKINKK True PC9_epitope_Rep5 1001.58694426977 1001.58637496793 47.948 1 -2.0616733989890665 0.45676032313089376 1.0 ['ENSG00000133884|ENST00000528416|DPF2', 'ENST00000531989.1_1_11:65113420-65116337:+|nuORF', 'ENST00000524666.5_1_11:65113195-65113594:+|nuORF'] 112218 18712 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 81.836 2 -2.061675248424144 0.45676032313089376 1.0 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 136153 18966 WRRHRHREQER True NCI_RA007_Epitope_Rep1 1644.8570201496798 1644.85592993586 77.919 2 -2.0617653307645734 0.45676032313089376 1.0 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19'] 112417 6498 TLCSFFPR True PC9_epitope_Rep2 969.47422301665 969.47312993586 30.408 2 -2.0618187180344365 0.45676032313089376 1.0 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 132561 24359 VVEFQQTV True NCI_RA007_Epitope_Rep5 948.4916469026 948.49054993586 101.16 2 -2.0618597078690035 0.45676032313089376 1.0 ['ENST00000536416.5_1_12:121783870-121790143:-|nuORF'] 32684 24489 GGSGGGGA True H1975_Epitope_Rep1 518.2084891961 518.2079449679301 101.5 1 -2.061908261081536 0.45676032313089376 1.0 ['ENSG00000145191|ENST00000648915|EIF2B5', 'ENST00000481054.5_1_3:183853173-183856676:+|nuORF', 'ENST00000336865.6_1_12:109535932-109536052:+|nuORF', 'ENST00000491144.5_1_3:183853173-183855624:+|nuORF', 'MBD2|p.Q223Efs*11|1|0.14|ENSG00000134046|chr18:54205032-54205033|TG/-|frameshift_variant', 'nc|ENSG00000134046|Q9UBB5-3|MBD2', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF', 'ENSG00000134046|ENST00000256429|MBD2', 'ENSG00000180998|ENST00000321662|GPR137C'] 122959 23973 VGHSAGHP True PC9_epitope_Rep3 760.36163579256 760.36052993586 97.497 2 -2.062109625697088 0.4567661510073594 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 126897 14004 VLQPQRVL True PC9_epitope_Rep4 951.5865503469498 951.58544993586 61.775 2 -2.062125754208169 0.4567717160448802 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 86706 13785 QLKKLRST True NCI_RA007_Epitope_Rep5 972.60801406752 972.60690993586 59.7 2 -2.0622327767361095 0.4567717160448802 1.0 ['ENST00000448507.5_1_4:6995977-7000814:+|nuORF'] 91381 14871 RHERIEAPW True PC9_epitope_Rep3 1192.6101393258398 1192.60849490379 62.338 3 -2.06228836738248 0.4567717160448802 1.0 ['ENSG00000158042|ENST00000288937|MRPL17'] 108057 22118 SYAFHTPD True NCI_RA007_Epitope_Rep5 936.39774651776 936.39664993586 92.21 2 -2.0626197116653144 0.4567717160448802 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000416281.6_1_11:67048455-67049666:+|nuORF'] 102559 18470 SLVVAFICKLH True NCI_RA007_Epitope_Rep3 1228.7002002002 1228.6991099358602 80.831 2 -2.0627933591814314 0.4567717160448802 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2'] 80980 16553 PIHGHSGG True NCI_RA007_Epitope_Rep1 760.36163579256 760.3610849679301 68.505 1 -2.0628173064109347 0.4567717160448802 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2', 'HIVEP2|p.N1055Ifs*49|1|0.65|ENSG00000010818|chr6:142771577-142771577|C/-|frameshift_variant', 'HIVEP2|p.P509Hfs*23|1|0.06|ENSG00000010818|chr6:142773215-142773215|A/-|frameshift_variant'] 19217 5929 ELINEELETFN True NCI_RA007_Epitope_Rep1 1349.63507623065 1349.63396993586 27.11 2 -2.062860149545273 0.4567717160448802 1.0 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'DMD|p.H1690Tfs*31|1|0.14|ENSG00000198947|chrX:32364668-32364668|G/-|frameshift_variant', 'DMD|p.G1635Efs*4|1|0.07|ENSG00000198947|chrX:32365141-32365141|C/-|frameshift_variant'] 5350 9874 ALRRGGPL True PC9_epitope_Rep4 838.5137197598598 838.51262993586 45.63 2 -2.0629622990675163 0.4567717160448802 1.0 ['ENST00000393892.7_1_17:40126102-40126558:+|nuORF'] 87481 23990 QQDSGGGGGG True H1975_Epitope_Rep1 818.3154734457797 818.3149249679301 99.559 1 -2.062973144432123 0.4567717160448802 1.0 ['nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1'] 105644 8149 SSEEDLLVSW True H1975_Epitope_Rep1 1163.5346339133898 1163.53352993586 36.285 2 -2.063183966155622 0.4567717160448802 1.0 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1', 'ENST00000454762.1_1_6:43472456-43473590:+|nuORF'] 59950 22115 LGGTRRPV True PC9_epitope_Rep1 854.5086343794198 854.50808496793 89.878 1 -2.0632001266878084 0.4567717160448802 1.0 ['ENST00000302165.4_1_19:46387791-46387821:-|nuORF'] 116211 18939 TTAKTSKLR True NCI_RA007_Epitope_Rep3 1004.5978433066399 1004.59674993586 82.781 2 -2.063263009239895 0.4567717160448802 1.0 ['ENSG00000204843|ENST00000628224|DCTN1'] 92063 24842 RKVIEDFKTK True NCI_RA007_Epitope_Rep1 1262.7346711326197 1262.73356993586 102.83 2 -2.063704021641709 0.45678336980306344 1.0 ['nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2', 'ENSG00000143882|ENST00000272238|ATP6V1C2'] 94029 25379 RRKPSTFW True H1975_Epitope_Rep3 1076.58794732928 1076.58737496793 105.57 1 -2.0638138589738 0.45678336980306344 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4', 'nc|ENSG00000136002|Q9NR80-3|ARHGEF4', 'nc|ENSG00000136002|Q9NR80|ARHGEF4', 'ENST00000490728.5_1_2:131799319-131803759:+|nuORF'] 104542 12378 SQPGPPGN True H1975_Epitope_Rep1 752.34531702208 752.34476496793 52.645 1 -2.063959499564146 0.45679992277081166 1.0 ['ENST00000553395.5_3_14:100828256-100841932:-|nuORF', 'ENST00000553545.5_3_14:100840588-100841932:-|nuORF', 'ENST00000556645.5_1_14:100841655-100841932:-|nuORF'] 93587 3803 RQNLKSQHRPL True PC9_epitope_Rep4 1375.7796642624298 1375.77802490379 20.791 3 -2.0641069852181926 0.45681647538346026 1.0 ['PRRC2A|p.P371Lfs*200|1|0.17|ENSG00000204469|chr6:31627016-31627016|C/-|frameshift_variant'] 115238 5162 TRECGNEFAY True H1975_Epitope_Rep2 1188.4869725283197 1188.4853249037901 24.934 3 -2.0641795382130876 0.45682230159496306 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A'] 48636 27230 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 114.27 3 -2.064653061020776 0.4568446794589898 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 16124 5389 EEANLGLP True PC9_epitope_Rep6 841.4181476091699 841.41704993586 28.608 2 -2.0646638707528018 0.4568446794589898 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B'] 39675 5568 HLREDSSQT True PC9_epitope_Rep3 1071.49450043691 1071.4934099358602 26.495 2 -2.064981060499066 0.4568826822832872 1.0 ['ENSG00000132681|ENST00000368081|ATP1A4'] 33176 24427 GIVMHPGDR True H1975_Epitope_Rep1 980.4861846826799 980.48508993586 101.26 2 -2.06511618645963 0.4569047797784379 1.0 ['ENST00000403258.1_1_6:88986231-88986483:-|nuORF'] 124305 10774 VGTPGRIL True PC9_epitope_Rep1 811.49158733295 811.49048993586 46.33 2 -2.0655645088411525 0.4569047797784379 1.0 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000590556.1_1_19:14521762-14522332:-|nuORF', 'nc|ENSG00000123136|O00148-3|DDX39A', 'ENST00000589318.5_1_19:14520811-14524032:-|nuORF', 'nc|ENSG00000123136|O00148-2|DDX39A', 'ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 43019 20705 IETILVQSWY True H1975_Epitope_Rep2 1250.6546894764201 1250.65358993586 85.748 2 -2.065861243461675 0.4569047797784379 1.0 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF'] 62821 23126 LLLWKKIHRM True PC9_epitope_Rep6 1336.81656736512 1336.8154699358602 102.05 2 -2.065878317184669 0.4569047797784379 1.0 ['ENSG00000120440|ENST00000239587|TTLL2'] 10869 22391 CVYPRLHIKKK True PC9_epitope_Rep6 1383.8172956411097 1383.8156549037901 99.096 3 -2.065890990127456 0.4569047797784379 1.0 ['ENST00000374660.5_1_10:37442527-37442566:+|nuORF', 'ENST00000374660.5_1_10:37490175-37490238:+|nuORF'] 128368 9122 VPRDEDDP True PC9_epitope_Rep5 941.4090394774498 941.40794993586 40.034 2 -2.065949784405877 0.4569047797784379 1.0 ['ENSG00000214336|ENST00000428390|FOXI3', 'chr2:88448829-88451896|210|10.59|0.06|7.45|-|2|FOXI3,FOXI3|1', 'nc|ENSG00000168269|Q12951-2|FOXI1', 'ENSG00000168269|ENST00000306268|FOXI1', 'ENSG00000186766|ENST00000388920|FOXI2'] 125387 8442 VIRWFDYLWTN True NCI_RA007_Epitope_Rep2 1511.7561348531897 1511.7550299358602 37.478 2 -2.0664705932815193 0.4569047797784379 1.0 ['ENSG00000183862|ENST00000329903|CNGA2', 'CNGA2|p.G533Afs*28|1|0.31|ENSG00000183862|chrX:151744099-151744099|G/-|frameshift_variant'] 94290 22016 RRRHAFRRQA True PC9_epitope_Rep4 1352.77625064784 1352.77514993586 92.906 2 -2.0666657798472676 0.4569047797784379 1.0 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 130049 7954 VSCGGSKG True H1975_Epitope_Rep3 693.3115743656499 693.31102496793 35.564 1 -2.066715178924059 0.4569047797784379 1.0 ['ENSG00000241598|ENST00000399682|KRTAP5-4', 'nc|ENSG00000241598|Q6L8H1|KRTAP5-4'] 82313 15729 PPIMLIGH True NCI_RA007_Epitope_Rep3 876.4891448047999 876.48804993586 69.509 2 -2.066769395454903 0.4569047797784379 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 137302 26651 YDDVDTSD True H1975_Epitope_Rep3 928.32978609724 928.32868993586 111.3 2 -2.0668143540569415 0.4569047797784379 1.0 ['nc|ENSG00000082074|O15117|FYB1', 'ENSG00000082074|ENST00000512982|FYB1', 'nc|ENSG00000082074|O15117-3|FYB1'] 13550 8940 DPARHNEF True PC9_epitope_Rep4 984.44134266524 984.44024993586 41.932 2 -2.0668420928101865 0.4569047797784379 1.0 ['ENSG00000198682|ENST00000456849|PAPSS2', 'nc|ENSG00000198682|O95340|PAPSS2'] 49752 22855 KGRYFWHVREE True NCI_RA007_Epitope_Rep1 1505.7527808082502 1505.7516899358602 93.789 2 -2.0669469475790616 0.4569047797784379 1.0 ['LRFN2|p.A582Pfs*75|1|0.29|ENSG00000156564|chr6:40392570-40392570|G/-|frameshift_variant', 'ENSG00000156564|ENST00000338305|LRFN2'] 22894 18791 EVDSLAGWK True PC9_epitope_Rep5 1003.4974605590298 1003.49636993586 77.293 2 -2.067116642011324 0.45692715203380196 1.0 ['ENSG00000152315|ENST00000282146|KCNK13'] 109054 4977 TAIVKPQP True NCI_RA007_Epitope_Rep5 852.5069030439199 852.50580993586 25.848 2 -2.067147490288146 0.45692715203380196 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'ENST00000467077.1_1_3:142074330-142089377:-|nuORF'] 113971 21206 TPAHHPPG True NCI_RA007_Epitope_Rep3 812.3929359208399 812.39182993586 92.212 2 -2.0672110571261015 0.45694369973190346 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 36501 9010 GVGNGGSL True PC9_epitope_Rep1 659.32385330151 659.3233049679301 39.505 1 -2.067310401758718 0.4569513698997373 1.0 ['ENSG00000005238|ENST00000322813|ATOSB', 'nc|ENSG00000005238|Q7L5A3-2|ATOSB'] 133383 23401 VVVGVGLIVG True PC9_epitope_Rep6 910.5851533646199 910.5846049679301 103.12 1 -2.067410863328312 0.4569513698997373 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 80421 10294 PGKKSIAA True NCI_RA007_Epitope_Rep4 770.4650382319398 770.46394993586 46.451 2 -2.067459608686954 0.4569513698997373 1.0 ['ENSG00000162377|ENST00000371538|COA7'] 125526 20186 VKFIPKCFIL True NCI_RA007_Epitope_Rep5 1206.71987301562 1206.71876993586 84.589 2 -2.0674614870880164 0.4569513698997373 1.0 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|104|3|anti-sense'] 34467 16376 GPKRGKHA True NCI_RA007_Epitope_Rep1 849.4933186684499 849.49222993586 67.812 2 -2.0674900704850185 0.4569513698997373 1.0 ['nc|ENSG00000290708|Q7RTT3|SSX9P', 'ENSG00000187754|ENST00000298181|SSX7', 'ENSG00000165583|ENST00000347757|SSX5', 'nc|ENSG00000165583|O60225-2|SSX5', 'nc|ENSG00000171483|Q7RTT6|SSX6P', 'ENSG00000126752|ENST00000376919|SSX1', 'ENSG00000268009|ENST00000595689|SSX4', 'ENSG00000269791|ENST00000595235|SSX4B'] 142319 10050 YYDRHHHDSKR True NCI_RA007_Epitope_Rep5 1512.6970568372801 1512.6959499358602 45.297 2 -2.0675630361964785 0.45695719310285665 1.0 ['ENSG00000173575|ENST00000394196|CHD2'] 132664 15714 VVGDTSGK True NCI_RA007_Epitope_Rep1 761.39193286133 761.3913849679301 65.218 1 -2.0676925893695883 0.45695811619378496 1.0 ['ENSG00000111203|ENST00000228799|ITFG2', 'ENST00000543029.1_1_12:2921860-2926550:+|nuORF', 'nc|ENSG00000111203|Q969R8-2|ITFG2'] 123046 9969 VGKAAATG True H1975_Epitope_Rep3 673.3758888743699 673.37534496793 43.38 1 -2.067749242603571 0.45695811619378496 1.0 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 115730 12090 TSAPQEDFFSV True PC9_epitope_Rep5 1226.54553295026 1226.54442993586 51.499 2 -2.067959827796215 0.456964862053806 1.0 ['ENSG00000074771|ENST00000159060|NOX3'] 117617 18525 TVTELRNR True PC9_epitope_Rep2 987.5461420869499 987.54504993586 76.601 2 -2.067985954166527 0.456964862053806 1.0 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 49822 15753 KHRHQTKK True NCI_RA007_Epitope_Rep4 1061.6206444398902 1061.61954993586 68.415 2 -2.0680032304652984 0.456964862053806 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 96510 16658 SADLRQAH True PC9_epitope_Rep4 896.44642804568 896.44532993586 72.041 2 -2.068433025862423 0.45698815203988635 1.0 ['nc|ENSG00000106948|Q7Z591-4|AKNA', 'nc|ENSG00000106948|Q7Z591-5|AKNA', 'nc|ENSG00000106948|Q7Z591-8|AKNA', 'nc|ENSG00000106948|Q7Z591-7|AKNA', 'nc|ENSG00000106948|Q7Z591-2|AKNA', 'ENSG00000106948|ENST00000374088|AKNA'] 6854 18399 AQGNGHCV True NCI_RA007_Epitope_Rep5 784.32862141212 784.3280749679301 77.581 1 -2.0684426355570293 0.45698815203988635 1.0 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 63151 15991 LLRMIILPLVV True H1975_Epitope_Rep2 1278.8461361579 1278.84448490379 66.708 3 -2.0684453640002727 0.45698815203988635 1.0 ['ENSG00000105281|ENST00000542575|SLC1A5'] 43375 10234 IGAPKQVP True NCI_RA007_Epitope_Rep2 808.4806882960798 808.4801349679301 44.399 1 -2.068455518357563 0.45698815203988635 1.0 ['ENST00000608694.1_1_7:129250897-129251161:-|nuORF'] 5590 9991 ANIGPLLV True PC9_epitope_Rep6 795.48543932335 795.48434993586 48.986 2 -2.0692174487502575 0.4570561684517492 1.0 ['ENSG00000101276|ENST00000645534|SLC52A3', 'nc|ENSG00000101276|Q9NQ40-2|SLC52A3'] 3580 10790 AGMVYLAG True NCI_RA007_Epitope_Rep2 780.3840110299199 780.3834649679301 46.572 1 -2.069311220750607 0.4570561684517492 1.0 ['ENSG00000198400|ENST00000524377|NTRK1', 'nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'PRCC-NTRK1|1|fusion', 'NTRK1|p.L644M|1|0.2|ENSG00000198400|chr1:156879246-156879246|C/A|missense_variant', 'ENST00000530298.5_1_1:156845639-156851431:+|nuORF'] 122096 13532 VGAASGHP True H1975_Epitope_Rep3 694.33983771882 694.3392849679301 57.33 1 -2.0693616513745705 0.4570561684517492 1.0 ['ENST00000466883.5_1_7:65439809-65440058:-|nuORF'] 12261 9507 DIKLRVSEW True NCI_RA007_Epitope_Rep1 1144.62405805448 1144.62296993586 40.975 2 -2.0694445754565045 0.4570561684517492 1.0 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13'] 7789 13723 ASSSGKPGPTV True PC9_epitope_Rep2 986.5032742154599 986.50216993586 58.076 2 -2.0694673182568137 0.4570561684517492 1.0 ['ENSG00000244462|ENST00000374114|RBM12'] 114305 9956 TPQEVTQIPQ True NCI_RA007_Epitope_Rep3 1139.5822528121498 1139.5811499358601 46.247 2 -2.069515884226268 0.4570561684517492 1.0 ['ENST00000514498.1_1_4:166327046-166327295:-|nuORF'] 11826 4183 DHGEGSPG True H1975_Epitope_Rep3 754.2881960687799 754.2876449679301 21.209 1 -2.0695657162627143 0.4570561684517492 1.0 ['ENST00000396556.6_1_3:32022633-32022780:-|nuORF'] 32278 22519 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 93.801 2 -2.0696990567182296 0.4570561684517492 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 119602 16368 VATVADTDDH True PC9_epitope_Rep4 1042.45671794586 1042.45562993586 70.922 2 -2.0700858564458606 0.4570727105088235 1.0 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 94998 19334 RTRHRALHR True NCI_RA007_Epitope_Rep1 1201.7016887252498 1201.70058993586 79.36 2 -2.0706468662369235 0.4570929322598973 1.0 ['ENSG00000168275|ENST00000366615|COA6', 'COA6|p.W66*|1|0.27|ENSG00000168275|chr1:234374304-234374304|G/-|frameshift_variant'] 122080 19227 VGAAAVGQR True PC9_epitope_Rep5 827.4613498338299 827.46024993586 78.996 2 -2.0711358863575184 0.4570929322598973 1.0 ['ENSG00000182968|ENST00000330949|SOX1'] 11689 17270 DGVLCSMFYD True NCI_RA007_Epitope_Rep5 1148.45183288956 1148.4507299358602 73.201 2 -2.0712307823660896 0.4570929322598973 1.0 ['ENST00000421918.1_1_3:50363554-50364574:-|nuORF'] 101221 13045 SLHHHISV True PC9_epitope_Rep2 928.48789893484 928.48680993586 55.457 2 -2.071249640147755 0.4570929322598973 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 35516 24603 GSQPDAKA True H1975_Epitope_Rep3 772.3715317699199 772.3709849679301 102.37 1 -2.0713140313952403 0.4570929322598973 1.0 ['nc|ENSG00000156050|Q96MY7-2|FAM161B'] 4609 21611 AKWKHPFSR True NCI_RA007_Epitope_Rep3 1155.6301464944297 1155.6285149037901 93.911 3 -2.071321640439558 0.4570929322598973 1.0 ['ENSG00000186910|ENST00000334708|SERPINA11'] 141529 18568 YTLQNRDRCAP True PC9_epitope_Rep1 1335.63536809751 1335.6342699358602 76.209 2 -2.071328711674473 0.4570929322598973 1.0 ['ENST00000561623.5_1_16:27472048-27472405:-|nuORF'] 48441 17036 IYYLLLDRKER True NCI_RA007_Epitope_Rep2 1480.8401988303197 1480.83910993586 71.003 2 -2.0713327842489235 0.4570929322598973 1.0 ['nc|ENSG00000160469|Q8TDC3-2|BRSK1', 'BRSK1|p.G410Vfs*36|1|0.3|ENSG00000160469|chr19:55303765-55303765|G/-|frameshift_variant', 'BRSK1|p.M571Ifs*6|1|0.74|ENSG00000160469|chr19:55304916-55304917|GC/-|frameshift_variant', 'BRSK1|p.M571Nfs*13|1|0.75|ENSG00000160469|chr19:55304914-55304915|-/AT|frameshift_variant', 'ENSG00000160469|ENST00000309383|BRSK1'] 39000 21839 HHMGVRYIE True NCI_RA007_Epitope_Rep3 1140.5498475684 1140.54820490379 94.871 3 -2.0714395288601506 0.4570929322598973 1.0 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2'] 11177 20314 DDQRCPLD True NCI_RA007_Epitope_Rep5 960.3970948947599 960.39598993586 85.076 2 -2.071491196617543 0.45712019210153937 1.0 ['nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-2|GPSM1'] 110855 12274 TGRGGGGA True PC9_epitope_Rep3 631.3037865632699 631.30323496793 52.238 1 -2.0719761011029973 0.45713275019295085 1.0 ['ENST00000528220.1_1_11:65487749-65488268:-|nuORF', 'ENST00000308418.8_1_11:65487749-65488293:-|nuORF'] 85933 17849 QHHKKTKR True NCI_RA007_Epitope_Rep3 1061.62064443989 1061.61954993586 78.253 2 -2.0721172814869853 0.45713275019295085 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 102583 9452 SLWAWVERE True NCI_RA007_Epitope_Rep1 1174.5771078620598 1174.5760099358602 40.759 2 -2.0722586629823456 0.45713275019295085 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 95793 4227 RYIKWPQR True NCI_RA007_Epitope_Rep4 1145.6457965585698 1145.64415490379 22.573 3 -2.0722760223937926 0.45713275019295085 1.0 ['ENST00000404600.2_1_6:1514778-1515111:-|nuORF'] 630 7152 AASMMKAR True H1975_Epitope_Rep3 864.4309783056799 864.4304249679301 32.482 1 -2.0727693404353214 0.4571394882678929 1.0 ['ENST00000472200.1_1_3:136538391-136538451:+|nuORF'] 115284 7536 TREVHLIL True NCI_RA007_Epitope_Rep2 979.5814649665099 979.58036993586 33.939 2 -2.0727704467812575 0.4571394882678929 1.0 ['ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C', 'ENST00000599239.5_1_19:48565016-48565422:-|nuORF'] 4084 16376 AHPFLAGH True NCI_RA007_Epitope_Rep1 848.4293214295599 848.42822993586 67.812 2 -2.0728301612851094 0.4571394882678929 1.0 ['ENST00000397061.3_1_19:33183408-33183504:+|nuORF'] 68115 9521 LTDPFLERITE True H1975_Epitope_Rep3 1332.6925315371197 1332.69142993586 41.628 2 -2.0730272476205505 0.4571453072074776 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 83552 14781 PTWNRFFL True PC9_epitope_Rep1 1079.55525021867 1079.55414993586 61.674 2 -2.0733997026160447 0.45716184494013484 1.0 ['ENST00000368895.2_1_10:124648046-124657367:+|nuORF'] 127142 24520 VLTTRKRKEL True H1975_Epitope_Rep3 1242.77720465094 1242.77554490379 102.05 3 -2.073522105099003 0.45717715400362263 1.0 ['LIG1|p.V646L|1|0.14|ENSG00000105486|chr19:48127345-48127345|C/A|missense_variant'] 59749 9897 LGDSKINKK True PC9_epitope_Rep4 1001.58694426977 1001.58637496793 45.72 1 -2.0737574755254284 0.45717715400362263 1.0 ['ENSG00000133884|ENST00000528416|DPF2', 'ENST00000531989.1_1_11:65113420-65116337:+|nuORF', 'ENST00000524666.5_1_11:65113195-65113594:+|nuORF'] 129563 17622 VRLPRKRNA True NCI_RA007_Epitope_Rep3 1108.69414373332 1108.69304993586 77.27 2 -2.073757553417335 0.45717715400362263 1.0 ['ENST00000431058.1_1_7:54724196-54724400:+|nuORF'] 142036 23871 YVLLALNK True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56895496793 103.43 1 -2.0739165197063465 0.45717715400362263 1.0 ['ENST00000591247.5_1_17:42113389-42113530:-|nuORF'] 139379 7864 YLMKYHSM True PC9_epitope_Rep2 1071.48815882863 1071.48706993586 35.616 2 -2.0740398268052105 0.45717715400362263 1.0 ['ENSG00000189037|ENST00000339042|DUSP21'] 64343 9293 LPLGGSICTLQ True PC9_epitope_Rep4 1100.58998104488 1100.5888899358602 43.352 2 -2.074074343459846 0.45717715400362263 1.0 ['ENST00000381042.8_1_X:7890131-7894131:-|nuORF'] 74082 16636 NDNSPAFP True H1975_Epitope_Rep2 860.36644638948 860.36534993586 69.222 2 -2.074116622583648 0.45717715400362263 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 61534 22935 LKFWHLRQA True NCI_RA007_Epitope_Rep5 1197.67709668685 1197.67546490379 95.444 3 -2.074154146022389 0.45717715400362263 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'ENST00000520923.5_1_8:101051146-101092499:-|nuORF'] 79516 23128 PCKTPILK True PC9_epitope_Rep1 898.5310096167799 898.52990993586 93.756 2 -2.074174861694962 0.45717715400362263 1.0 ['nc|ENSG00000177853|Q6AHZ1-2|ZNF518A', 'ZNF518A|p.I1208Vfs*15|1|0.07|ENSG00000177853|chr10:96159943-96159944|-/GTGTTCCTTC|frameshift_variant', 'ENSG00000177853|ENST00000316045|ZNF518A'] 97011 17241 SCDLRRLVMY True NCI_RA007_Epitope_Rep5 1254.6212982564998 1254.6196649037902 73.092 3 -2.0742758228671754 0.45717715400362263 1.0 ['IGF1|p.E106V|1|0.12|ENSG00000017427|chr12:102419594-102419594|T/A|missense_variant'] 39307 10267 HIQLQFQPL True PC9_epitope_Rep4 1122.61857875122 1122.61693490379 47.175 3 -2.074726454232986 0.45719368944525424 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 39819 25043 HNFLWSFKV True PC9_epitope_Rep4 1176.60801406752 1176.60637490379 104.89 3 -2.0748967632536357 0.45719950699319434 1.0 ['ENST00000600588.1_1_19:6593880-6593970:+|nuORF'] 129996 24810 VRVYKSGP True PC9_epitope_Rep4 904.5130510535199 904.51250496793 103.94 1 -2.075148305404291 0.4572160418408248 1.0 ['ENSG00000163840|ENST00000296161|DTX3L', 'nc|ENSG00000163840|Q8TDB6-2|DTX3L'] 32540 10239 GGGGGGAG True NCI_RA007_Epitope_Rep5 488.19792451240005 488.19737496793 46.015 1 -2.075335952782652 0.4572334930178225 1.0 ['PCDH10|p.A576Tfs*45|1|0.11|ENSG00000138650|chr4:133151866-133151884|GCGCCTCTACCAGGGCGCA/-|frameshift_variant', 'ENSG00000113389|ENST00000265074|NPR3', 'nc|ENSG00000113389|P17342-2|NPR3', 'NPR3|p.R412Mfs*6|1|0.15|ENSG00000113389|chr5:32780757-32780760|GACC/-|frameshift_variant', 'ENSG00000253293|ENST00000283921|HOXA10', 'PCDH10|p.A372Rfs*11|1|0.21|ENSG00000138650|chr4:133151253-133151253|G/-|frameshift_variant', 'ENST00000281282.5_1_15:57668737-57730217:+|nuORF', 'NPR3|p.H195Efs*58|1|0.05|ENSG00000113389|chr5:32712359-32712366|CACCACTG/-|frameshift_variant', 'ENST00000505897.5_1_17:48172799-48183513:+|nuORF', 'ENST00000543009.5_2_11:71746988-71753144:-|nuORF', 'ENSG00000205922|ENST00000382349|ONECUT3', 'YEATS2|p.G812A|1|0.16|ENSG00000163872|chr3:183775981-183775981|G/C|missense_variant', 'ENST00000378279.3_1_8:117950559-117950772:+|nuORF', 'nc|ENSG00000130224|Q5VUJ6-2|LRCH2', 'nc|ENSG00000179915|P58400|NRXN1', 'nc|ENSG00000179915|P58400-1|NRXN1', 'ENSG00000205476|ENST00000380243|CCDC85C', 'ENST00000370544.9_1_1:87794323-87794602:+|nuORF', 'ENSG00000130224|ENST00000317135|LRCH2', 'ENSG00000104824|ENST00000221419|HNRNPL', 'ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'ENSG00000174279|ENST00000308618|EVX2', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.G809Afs*17|1|0.11|ENSG00000138650|chr4:133152560-133152560|C/-|frameshift_variant', 'PCDH10|p.A855Pfs*34|1|0.13|ENSG00000138650|chr4:133152700-133152700|G/-|frameshift_variant', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'ENSG00000248713|ENST00000511828|C4orf54', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000275023|ENST00000621332|MLLT6', 'ENSG00000130226|ENST00000377770|DPP6', 'ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF', 'ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'MCU|p.R94Lfs*2|1|0.33|ENSG00000156026|chr10:72859236-72859237|-/T|frameshift_variant', 'ENSG00000163013|ENST00000520530|FBXO41', 'ENSG00000169840|ENST00000302945|GSX1', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3', 'ENSG00000169991|ENST00000455833|IFFO2', 'ADCY1|p.L707Wfs*35|1|0.37|ENSG00000164742|chr7:45686005-45686005|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.E2250Rfs*28|1|0.07|ENSG00000117713|chr1:26780644-26780645|-/A|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.M724Ifs*11|1|0.14|ENSG00000117713|chr1:26761394-26761415|GCCACCTCGGCCACCCAGTGGC/-|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.14|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.W1073Cfs*20|1|0.27|ENSG00000117713|chr1:26771138-26771138|G/-|frameshift_variant', 'nc|ENSG00000008382|Q8N594-2|MPND', 'nc|ENSG00000008382|Q8N594|MPND', 'ENSG00000008382|ENST00000599840|MPND', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000142408|ENST00000270458|CACNG8'] 87103 13296 QNRRMKWKRSK True NCI_RA007_Epitope_Rep2 1516.85211801004 1516.8510299358602 56.355 2 -2.075408113928199 0.4572334930178225 1.0 ['ENSG00000130675|ENST00000252971|MNX1', 'nc|ENSG00000130675|P50219-2|MNX1'] 93591 17213 RQNQSNLK True NCI_RA007_Epitope_Rep5 986.52574099554 986.52464993586 72.982 2 -2.075426031249823 0.4572334930178225 1.0 ['nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2', 'nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2'] 25791 7451 FEVTLGGV True NCI_RA007_Epitope_Rep2 820.4330693973199 820.43196993586 33.609 2 -2.075888580939167 0.4572500267924124 1.0 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF'] 36104 14073 GVAGRHLL True PC9_epitope_Rep2 821.4871706588499 821.4866249679301 59.407 1 -2.0759978771617145 0.4572509430727023 1.0 ['ENST00000372429.7_1_9:132637899-132641867:+|nuORF'] 87941 17961 QRLGRILKIH True H1975_Epitope_Rep2 1232.78295873772 1232.7823749679299 74.409 1 -2.076045107700904 0.4572509430727023 1.0 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8'] 60193 24899 LGPKIKSQE True NCI_RA007_Epitope_Rep1 998.5760452328999 998.57494993586 103.06 2 -2.0761238845297356 0.45725277551545285 1.0 ['ENST00000419525.5_1_2:27015485-27016144:+|nuORF'] 68970 6098 LTPGESSK True NCI_RA007_Epitope_Rep1 817.41814760917 817.41704993586 27.758 2 -2.0762032957815753 0.45725277551545285 1.0 ['nc|ENSG00000006432|P80192-4|MAP3K9', 'ENSG00000006432|ENST00000554752|MAP3K9'] 49806 24387 KHLQKQEGA True PC9_epitope_Rep2 1037.5617921510898 1037.5606899358602 99.371 2 -2.0762154932536068 0.45725277551545285 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant'] 117624 8137 TVTGARVM True PC9_epitope_Rep5 833.4429228883699 833.44182993586 36.239 2 -2.076219896905003 0.45725277551545285 1.0 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'ENST00000366131.6_1_12:6462937-6464599:-|nuORF'] 32703 13858 GGTHDGPK True NCI_RA007_Epitope_Rep2 767.3562160589499 767.35566496793 58.557 1 -2.076484430968817 0.4572858398165413 1.0 ['nc|ENSG00000186185|Q86Y91-6|KIF18B', 'ENSG00000186185|ENST00000593135|KIF18B'] 122018 23336 VFVLPFPV True PC9_epitope_Rep3 916.5422259234799 916.54112993586 95.042 2 -2.0766607936133323 0.4572858398165413 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 46529 12862 ISYPRYIEIM True NCI_RA007_Epitope_Rep2 1283.65839495787 1283.65728993586 54.649 2 -2.0768344365682636 0.45728675525075013 1.0 ['ADAMTS20|p.G983Efs*12|1|0.33|ENSG00000173157|chr12:43432452-43432452|C/-|frameshift_variant', 'nc|ENSG00000173157|P59510-2|ADAMTS20', 'ADAMTS20|p.W1663*|1|0.33|ENSG00000173157|chr12:43377371-43377372|CC/-|frameshift_variant', 'nc|ENSG00000173157|P59510|ADAMTS20', 'ENSG00000173157|ENST00000389420|ADAMTS20'] 127475 26725 VNLKLGDD True H1975_Epitope_Rep1 872.4603467743199 872.45924993586 111.29 2 -2.0769079586416908 0.45728675525075013 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 32909 15454 GHVIIGPS True PC9_epitope_Rep1 778.4337381036601 778.43264993586 64.265 2 -2.076972910076233 0.45730328650571683 1.0 ['ENSG00000173227|ENST00000527043|SYT12'] 109218 4993 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 24.066 2 -2.0770674874535633 0.4573042015365987 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 109055 5618 TAKDPNTYKV True H1975_Epitope_Rep2 1135.5873381925899 1135.58624993586 26.609 2 -2.077080425727948 0.4573042015365987 1.0 ['ENSG00000197594|ENST00000647893|ENPP1'] 46143 20050 ISKWNNRV True PC9_epitope_Rep5 1015.55631284783 1015.55520993586 82.176 2 -2.077232868953163 0.45731001671595733 1.0 ['ENST00000470936.1_1_3:69134198-69151212:+|nuORF', 'ENSG00000144746|ENST00000273258|ARL6IP5'] 135663 7085 WLPGGIKL True PC9_epitope_Rep2 882.53272386894 882.53162993586 32.648 2 -2.07738928730741 0.4573265470131262 1.0 ['ENST00000487841.5_1_6:166738023-166743732:-|nuORF', 'ENSG00000198818|ENST00000361731|SFT2D1'] 131952 23362 VTSAAGHA True PC9_epitope_Rep2 712.35040240252 712.34985496793 95.337 1 -2.0779066881517014 0.4573935776965853 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF'] 92635 16523 RNGGLLGR True NCI_RA007_Epitope_Rep5 841.48823328801 841.48712993586 70.317 2 -2.077934988541269 0.4573935776965853 1.0 ['ENSG00000104549|ENST00000265896|SQLE', 'SQLE|p.P85Lfs*25|1|0.18|ENSG00000104549|chr8:124999651-124999651|C/-|frameshift_variant'] 56128 24472 LAVFYTIFTL True NCI_RA007_Epitope_Rep1 1186.66379760814 1186.6627099358602 101.39 2 -2.0783563050224716 0.4573935776965853 1.0 ['ENSG00000169488|ENST00000305051|OR4K15'] 119013 15441 VAFAIPAA True NCI_RA007_Epitope_Rep3 758.4326754744999 758.43212496793 68.296 1 -2.0784332962672507 0.4573935776965853 1.0 ['ENST00000501520.1_1_16:28303160-28303361:-|nuORF'] 94789 18823 RSPDRGLDR True PC9_epitope_Rep4 1070.5581037529798 1070.5570099358602 80.488 2 -2.0784563257545847 0.4573935776965853 1.0 ['ENSG00000135951|ENST00000393483|TSGA10'] 95252 24788 RVLVAEVN True PC9_epitope_Rep3 898.52361573722 898.52250993586 100.72 2 -2.0786585864279576 0.4573935776965853 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 65498 25245 LRLRPPLRAAT True PC9_epitope_Rep2 1262.7935234214199 1262.7924299358601 102.77 2 -2.078985308009046 0.45740611774789736 1.0 ['ENST00000589114.5_1_18:33877702-34289359:+|nuORF'] 83857 24937 PVNGKAIC True PC9_epitope_Rep2 800.4214591678 800.42036993586 101.59 2 -2.078986265521336 0.45740611774789736 1.0 ['ENSG00000148400|ENST00000651671|NOTCH1', 'NOTCH1|p.D1815Gfs*19|1|0.53|ENSG00000148400|chr9:136502029-136502030|-/C|frameshift_variant'] 43300 22611 IFVFMFPL True H1975_Epitope_Rep1 1012.5455970517598 1012.54448993586 94.041 2 -2.0790262326948863 0.45740611774789736 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 15663 20509 EATLLLLK True PC9_epitope_Rep4 899.56916894731 899.56806993586 87.037 2 -2.0791020047141653 0.45740611774789736 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2'] 70120 2954 LVPFDGPG True NCI_RA007_Epitope_Rep2 800.4068546494799 800.40574993586 15.979 2 -2.0793547685400875 0.4574226450672838 1.0 ['nc|ENSG00000118482|Q92576-2|PHF3', 'ENSG00000118482|ENST00000262043|PHF3', 'PHF3|p.S1731Ffs*14|1|0.43|ENSG00000118482|chr6:63712780-63712780|C/-|frameshift_variant'] 66194 10543 LSERVVVKY True NCI_RA007_Epitope_Rep1 1091.6338944621898 1091.63278993586 44.994 2 -2.07958745230735 0.4574342711435857 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant', 'HMCN1|p.S1831L|1|0.11|ENSG00000143341|chr1:186019562-186019562|C/T|missense_variant', 'HMCN1|p.G2251Afs*42|1|0.17|ENSG00000143341|chr1:186053872-186053872|G/-|frameshift_variant'] 102946 7904 SPEELQEYLVF True H1975_Epitope_Rep1 1352.6499980187998 1352.64890993586 35.354 2 -2.0796919551705924 0.4574342711435857 1.0 ['ENSG00000110455|ENST00000263776|ACCS'] 133378 25448 VVVGVGLIVG True PC9_epitope_Rep5 910.5851533646199 910.5846049679301 103.12 1 -2.079870809364468 0.4574400839949003 1.0 ['ENSG00000138792|ENST00000265162|ENPEP'] 82710 13062 PQVVRVGG True NCI_RA007_Epitope_Rep5 810.4711862415398 810.47008993586 56.921 2 -2.080542497634622 0.4574566102421256 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.E2527Sfs*2|1|0.21|ENSG00000168477|chr6:32058304-32058304|C/-|frameshift_variant'] 52645 23934 KLRNEKHH True PC9_epitope_Rep2 1060.58900995844 1060.5879099358601 97.543 2 -2.0808962806946356 0.45747313613524604 1.0 ['nc|ENSG00000086102|Q12986-3|NFX1', 'nc|ENSG00000086102|Q12986-2|NFX1', 'ENST00000379521.8_2_9:33290558-33364805:+|nuORF', 'ENSG00000086102|ENST00000379540|NFX1'] 122445 15263 VGDYGSLS True PC9_epitope_Rep3 796.36029837988 796.35920993586 63.859 2 -2.0812282031528304 0.4575110882560905 1.0 ['ENST00000488395.1_1_20:57572656-57581383:-|nuORF', 'ENSG00000101160|ENST00000217131|CTSZ'] 116896 17361 TVFHNSRAV True PC9_epitope_Rep4 1029.5355774032498 1029.5344899358602 74.783 2 -2.0813230134601843 0.45751199862872816 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 30072 6998 FYIAPSPG True NCI_RA007_Epitope_Rep2 850.4225047136199 850.42140993586 31.842 2 -2.0813401187126632 0.45751199862872816 1.0 ['ENST00000532245.5_1_11:57529333-57563148:+|nuORF'] 55319 19076 LAEEFSIPVSF True PC9_epitope_Rep1 1237.6230549949698 1237.6213949037901 78.165 3 -2.08149714458061 0.45752852322031173 1.0 ['ENST00000474051.1_1_14:68352547-68354002:+|nuORF'] 80995 22950 PIIWLYEKLA True PC9_epitope_Rep6 1244.71689581016 1244.7157899358601 101.37 2 -2.0816679217987577 0.45752943319014 1.0 ['ENST00000480929.1_1_2:219612227-219612548:+|nuORF'] 52923 24647 KPGKMFVLR True PC9_epitope_Rep2 1074.6372060208198 1074.63610993586 100.46 2 -2.081750013644869 0.45752943319014 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 112203 18237 TKKATRTKA True NCI_RA007_Epitope_Rep2 1003.6138277239498 1003.61327496793 75.695 1 -2.0827141658784756 0.4575839055587098 1.0 ['ZNF624|p.A480Pfs*12|1|0.08|ENSG00000197566|chr17:16623449-16623449|T/-|frameshift_variant', 'ENSG00000197566|ENST00000311331|ZNF624', 'nc|ENSG00000197566|Q9P2J8-2|ZNF624', 'ENST00000579528.1_1_17:16525604-16527848:-|nuORF'] 79203 15861 PAPFYPSS True NCI_RA007_Epitope_Rep5 864.40176926904 864.40066993586 67.73 2 -2.0827655258856113 0.4575839055587098 1.0 ['ENST00000452802.5_1_3:8540357-8543323:-|nuORF'] 95066 9602 RTTIEFLN True NCI_RA007_Epitope_Rep5 992.5290950404799 992.52798993586 43.575 2 -2.0828356256481046 0.4575906247321964 1.0 ['ENST00000262455.6_1_9:102782940-102782994:-|nuORF'] 17066 13132 EGHGEGWE True NCI_RA007_Epitope_Rep3 899.3409599176299 899.33986993586 58.931 2 -2.082915295953977 0.4575906247321964 1.0 ['ENST00000398117.1_1_18:60794470-60795067:-|nuORF'] 11344 13019 DENGHIPGGW True H1975_Epitope_Rep3 1080.4624720326399 1080.46187496793 55.314 1 -2.083010857586696 0.4575906247321964 1.0 ['nc|ENSG00000133641|Q8N999-3|RLIG1'] 19122 6243 ELGPADGGRD True PC9_epitope_Rep5 985.4464876153299 985.44538993586 28.993 2 -2.0833516158343865 0.45760714706543976 1.0 ['ENSG00000174586|ENST00000311044|ZNF497'] 121652 17641 VFIGEKRML True PC9_epitope_Rep2 1091.61613622307 1091.61502993586 73.136 2 -2.083541463623649 0.4576236690447115 1.0 ['ENST00000336095.10_1_20:3913450-3913603:-|nuORF'] 24745 5072 FAQWWKPYDF True NCI_RA007_Epitope_Rep4 1386.6397081186199 1386.6386099358601 26.011 2 -2.083741153255196 0.457650536597905 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2'] 127210 12869 VLVRVGASEH True NCI_RA007_Epitope_Rep2 1065.5930922793698 1065.59198993586 54.676 2 -2.084064508474618 0.457650536597905 1.0 ['C8B|p.G429V|1|0.45|ENSG00000021852|chr1:56940961-56940961|C/A|missense_variant'] 6018 6966 APKLLIYYDDL True H1975_Epitope_Rep1 1322.7122043525399 1322.7111099358601 31.836 2 -2.0841086942491978 0.457650536597905 1.0 ['nc|ENSG00000211655|A0A0B4J1U3|IGLV1-36'] 137936 24855 YFEAYRHVL True PC9_epitope_Rep2 1196.59784330664 1196.59674993586 101.29 2 -2.0841257099136494 0.457650536597905 1.0 ['ENSG00000124201|ENST00000396105|ZNFX1', 'ZNFX1|p.Q1281Kfs*39|1|0.07|ENSG00000124201|chr20:49249183-49249183|G/-|frameshift_variant', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 33311 19847 GKPKTTTT True PC9_epitope_Rep6 832.46543215476 832.46432993586 89.002 2 -2.084213177204641 0.457650536597905 1.0 ['ENST00000352536.7_1_6:117593658-117593937:+|nuORF'] 31729 11788 GEGSHSSR True H1975_Epitope_Rep1 815.3521933076701 815.35164496793 50.334 1 -2.084217938114953 0.457650536597905 1.0 ['ZBTB4|p.G750E|1|0.47|ENSG00000174282|chr17:7462733-7462733|C/T|missense_variant'] 80004 20519 PFCLKVSK True PC9_epitope_Rep6 920.5153595526399 920.5142699358599 91.656 2 -2.0842945887219266 0.457650536597905 1.0 ['ENSG00000056277|ENST00000370978|ZNF280C'] 118113 16632 TYHMWWVCFWH True H1975_Epitope_Rep2 1594.66383177482 1594.6627299358602 69.206 2 -2.0843415055727785 0.457650536597905 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 137639 16773 YEHWLYYLD True PC9_epitope_Rep5 1300.57643915572 1300.57534993586 69.523 2 -2.0843633213923756 0.457650536597905 1.0 ['SFMBT1|p.A585Gfs*4|1|0.17|ENSG00000163935|chr3:52911155-52911156|-/C|frameshift_variant', 'nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 30628 13073 GAKKAAGG True NCI_RA007_Epitope_Rep3 658.3762232275399 658.3756749679301 58.704 1 -2.0843743880108523 0.457650536597905 1.0 ['DCD|p.V77A|1|0.12|ENSG00000161634|chr12:54645232-54645232|A/G|missense_variant'] 65116 24511 LQMLLAKH True H1975_Epitope_Rep1 952.55280769052 952.55170993586 101.58 2 -2.0843763781275917 0.457650536597905 1.0 ['nc|ENSG00000144445|A0AUZ9-4|KANSL1L', 'nc|ENSG00000144445|A0AUZ9-3|KANSL1L', 'nc|ENSG00000144445|A0AUZ9-2|KANSL1L', 'ENSG00000144445|ENST00000281772|KANSL1L', 'ENST00000453904.2_1_2:211018217-211034955:-|nuORF'] 36471 15649 GVGGPFPA True PC9_epitope_Rep2 700.3544251538 700.3538749679301 65.468 1 -2.0843912904527637 0.457650536597905 1.0 ['ENST00000375151.4_1_X:54471110-54471305:+|nuORF'] 92193 11523 RLHAMRLDSH True NCI_RA007_Epitope_Rep5 1234.63530852786 1234.63420993586 50.973 2 -2.084805781280694 0.45767286436466453 1.0 ['nc|ENSG00000288611|P48145|NPBWR1'] 3616 11281 AGPEGRLLPL True PC9_epitope_Rep1 1021.5920296502098 1021.59092993586 48.272 2 -2.0848264264276763 0.45767286436466453 1.0 ['ENSG00000126705|ENST00000673934|AHDC1', 'AHDC1|p.V704Gfs*16|1|0.27|ENSG00000126705|chr1:27550005-27550006|-/C|frameshift_variant'] 91149 20165 RFYPEIRF True NCI_RA007_Epitope_Rep5 1126.5923640033798 1126.59126993586 84.511 2 -2.0849423709384394 0.457678672792897 1.0 ['ENST00000488164.5_1_9:74978812-74978980:-|nuORF'] 77729 10061 NTMGAQEAHIY True PC9_epitope_Rep4 1233.54482175761 1233.54372993586 46.368 2 -2.085351865011323 0.45773803148762987 1.0 ['nc|ENSG00000197430|Q96PE5-3|OPALIN', 'nc|ENSG00000197430|Q96PE5-4|OPALIN', 'nc|ENSG00000197430|Q96PE5-2|OPALIN', 'ENSG00000197430|ENST00000371172|OPALIN'] 94361 23886 RRRNHAAKR True PC9_epitope_Rep2 1163.68603866111 1163.68494993586 97.356 2 -2.085415310593396 0.4577438390935087 1.0 ['ENST00000360150.8_1_12:29493870-29493933:-|nuORF'] 80046 18008 PFHEEFES True NCI_RA007_Epitope_Rep5 1020.4188758851599 1020.41776993586 76.064 2 -2.085475727692015 0.45774964657499034 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'VCAN|p.T2689Hfs*10|1|0.15|ENSG00000038427|chr5:83541064-83541065|-/C|frameshift_variant', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'VCAN|p.R1675Kfs*9|1|0.52|ENSG00000038427|chr5:83538025-83538026|-/A|frameshift_variant', 'VCAN|p.T2115Nfs*13|1|0.06|ENSG00000038427|chr5:83539344-83539345|-/A|frameshift_variant'] 98873 23243 SGVGKWGP True PC9_epitope_Rep5 786.4024379753798 786.40134993586 94.388 2 -2.085523216882735 0.4577523613699158 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 101916 20429 SLPTWGKV True PC9_epitope_Rep2 886.4912529797799 886.49070496793 84.008 1 -2.0855938594250465 0.4577523613699158 1.0 ['IGSF5|p.T332Kfs*74|1|0.12|ENSG00000183067|chr21:39792043-39792046|AGAC/-|frameshift_variant', 'ENSG00000183067|ENST00000380588|IGSF5'] 135680 25818 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 109.37 3 -2.0857986690978096 0.4577523613699158 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 140638 10313 YRRYKHFDWLY True H1975_Epitope_Rep3 1645.8153810648098 1645.8142899358602 44.722 2 -2.085847062571518 0.4577523613699158 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 27305 25369 FLRKKQVF True PC9_epitope_Rep3 1064.6494849566798 1064.6483899358602 103.0 2 -2.085947238750973 0.4577523613699158 1.0 ['ENST00000473805.5_1_1:52281970-52293513:-|nuORF'] 59158 19136 LFACSVHE True NCI_RA007_Epitope_Rep5 904.4112884069199 904.41018993586 80.478 2 -2.0861089639255526 0.4577523613699158 1.0 ['nc|ENSG00000117602|Q9UKA8-5|RCAN3', 'ENSG00000117602|ENST00000374395|RCAN3', 'nc|ENSG00000117602|Q9UKA8-4|RCAN3', 'nc|ENSG00000117602|Q9UKA8-3|RCAN3', 'nc|ENSG00000117602|Q9UKA8-2|RCAN3'] 43999 17013 IIFVFWREI True H1975_Epitope_Rep3 1221.6910154154898 1221.68935490379 71.035 3 -2.086306894954103 0.4577590730448378 1.0 ['nc|ENSG00000214787|Q96PG1-3|MS4A4E'] 100347 3256 SKPKYYFAWT True PC9_epitope_Rep2 1289.6444591458899 1289.64280490379 17.776 3 -2.0864214185567076 0.4577590730448378 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-2|MBOAT1'] 83709 20013 PVGASQRT True NCI_RA007_Epitope_Rep4 814.42971535238 814.42860993586 86.548 2 -2.0864407169673833 0.4577590730448378 1.0 ['NYAP1|p.A79Pfs*124|1|0.42|ENSG00000166924|chr7:100486986-100486986|G/-|frameshift_variant'] 44440 24840 ILHYDETY True H1975_Epitope_Rep1 1052.4814761417201 1052.4803699358602 102.87 2 -2.0867183713387987 0.45777068631335466 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 54159 23172 KVRFKKVEF True H1975_Epitope_Rep3 1179.7128134892298 1179.7111649037902 96.763 3 -2.0867414094845667 0.45777068631335466 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49'] 121222 5369 VESVTKTAS True PC9_epitope_Rep5 920.48147614172 920.48036993586 25.665 2 -2.0871541624743655 0.4577764927610726 1.0 ['ITGAE|p.G276E|1|0.72|ENSG00000083457|chr17:3759441-3759441|C/T|missense_variant'] 33300 21342 GKPHGRGV True PC9_epitope_Rep3 806.4511195033 806.45002993586 87.389 2 -2.0873734482718302 0.4577930074423087 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.W1179Cfs*25|1|0.06|ENSG00000003393|chr2:201723411-201723423|ATCTTGCCACATT/-|frameshift_variant', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 129923 22369 VRSVRGGGV True PC9_epitope_Rep2 885.5144480358498 885.51334993586 91.533 2 -2.0875137509479216 0.4578309382562697 1.0 ['ENST00000566203.6_1_20:33859916-33865902:-|nuORF'] 16622 8327 EEPVVPALRP True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 37.399 2 -2.087791545240983 0.4578599650929961 1.0 ['ENSG00000061938|ENST00000672887|TNK2', 'nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF', 'TNK2|p.D734*|1|0.32|ENSG00000061938|chr3:195868054-195868055|-/C|frameshift_variant'] 61084 26751 LIHGTADD True PC9_epitope_Rep5 840.39774651776 840.39664993586 109.15 2 -2.087930455441149 0.4578599650929961 1.0 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF', 'ENST00000480044.5_1_2:163027491-163031488:-|nuORF', 'nc|ENSG00000078098|Q12884-2|FAP', 'ENST00000422436.5_1_2:163027491-163054158:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 49833 22512 KHVVFGHV True PC9_epitope_Rep1 921.5184707871298 921.51736993586 91.394 2 -2.087931234844963 0.4578599650929961 1.0 ['ENSG00000108179|ENST00000225174|PPIF', 'ENST00000448165.1_1_10:81113430-81113595:+|nuORF'] 71018 19134 LYIPVVKPLMP True NCI_RA007_Epitope_Rep5 1268.75665244716 1268.75554993586 80.47 2 -2.0880134653688827 0.4578599650929961 1.0 ['ENSG00000229894|ENST00000505354|GK3'] 120351 18657 VEEESKKL True PC9_epitope_Rep5 960.5127762699999 960.51166993586 76.789 2 -2.0882547889328205 0.4578599650929961 1.0 ['USP6NL|p.P532Afs*9|1|0.1|ENSG00000148429|chr10:11463334-11463335|-/C|frameshift_variant', 'ENSG00000148429|ENST00000609104|USP6NL', 'nc|ENSG00000148429|Q92738-2|USP6NL'] 865 11423 ADGAHGMR True H1975_Epitope_Rep2 813.35517051313 813.35462496793 48.99 1 -2.0886860476119526 0.45789298983863885 1.0 ['ENSG00000171873|ENST00000379453|ADRA1D'] 137271 21502 YCPACLVT True H1975_Epitope_Rep2 868.38229677776 868.38118993586 88.965 2 -2.0889139326866313 0.45789298983863885 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'ENST00000370082.1_1_20:62201547-62204491:-|nuORF'] 133505 18696 VWKIKRMA True NCI_RA007_Epitope_Rep2 1030.6109912729798 1030.60988993586 77.524 2 -2.0890134792322743 0.45789569481471964 1.0 ['nc|ENSG00000161203|Q96CW1-2|AP2M1', 'ENSG00000161203|ENST00000292807|AP2M1', 'ENST00000461733.5_1_3:183898306-183901401:+|nuORF'] 21621 19869 ERRQFNREMKR True NCI_RA007_Epitope_Rep2 1548.8055617404395 1548.8044699358602 82.285 2 -2.089068229673164 0.45789569481471964 1.0 ['ENST00000498171.5_1_22:20077477-20097628:+|nuORF', 'nc|ENSG00000128191|Q8WYQ5-3|DGCR8', 'ENSG00000128191|ENST00000351989|DGCR8', 'ENST00000495826.5_1_22:20074657-20094820:+|nuORF'] 91597 22515 RILHVRNAPS True NCI_RA007_Epitope_Rep4 1161.67307393557 1161.67141490379 97.704 3 -2.089269385733856 0.45789569481471964 1.0 ['ENSG00000087299|ENST00000267436|L2HGDH'] 55617 17514 LAIIVYMVP True NCI_RA007_Epitope_Rep3 1017.5932755201699 1017.5921699358599 76.853 2 -2.0895268084401497 0.45789569481471964 1.0 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'ENST00000495425.6_1_17:19458825-19480863:+|nuORF'] 48624 24832 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 103.28 3 -2.0895563384181455 0.45789569481471964 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 123802 15232 VGRLLQQLAM True PC9_epitope_Rep4 1127.64849898051 1127.6474099358602 66.519 2 -2.089578415560641 0.45789569481471964 1.0 ['GAPVD1|p.R1391Gfs*8|1|0.07|ENSG00000165219|chr9:125360595-125360595|C/-|frameshift_variant', 'nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1'] 81143 17518 PKGKCIRV True NCI_RA007_Epitope_Rep5 899.5374919795499 899.53638993586 74.172 2 -2.0899102243915553 0.45796573875803 1.0 ['E2F2|p.H379Tfs*22|1|0.22|ENSG00000007968|chr1:23510060-23510060|C/-|frameshift_variant', 'ENSG00000007968|ENST00000361729|E2F2'] 99064 17767 SHGFWLKRSSY True H1975_Epitope_Rep3 1366.6782188856598 1366.6771299358602 74.314 2 -2.0900790469225408 0.4579822485840623 1.0 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF'] 82315 15903 PPIMLIGH True NCI_RA007_Epitope_Rep3 876.4891448047999 876.48804993586 70.213 2 -2.090286380008465 0.45799875805657264 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 105883 13045 SSPPPPPL True H1975_Epitope_Rep3 790.42250471362 790.42140993586 55.418 2 -2.0904953201384604 0.45799965740225257 1.0 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12'] 67494 12936 LSSVLTVAW True PC9_epitope_Rep5 974.54368247546 974.54258993586 54.77 2 -2.090539771489752 0.45799965740225257 1.0 ['nc|ENSG00000101384|P78504-2|JAG1', 'JAG1|p.A1131Pfs*19|1|0.19|ENSG00000101384|chr20:10639764-10639764|C/-|frameshift_variant', 'JAG1|p.N1187Tfs*25|1|0.07|ENSG00000101384|chr20:10639597-10639597|G/-|frameshift_variant', 'ENSG00000101384|ENST00000254958|JAG1'] 37941 25478 HAAAPGGG True H1975_Epitope_Rep3 636.2979729068401 636.29742496793 106.01 1 -2.090839289611779 0.4580063592664361 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 142221 20908 YWKAFKKF True PC9_epitope_Rep6 1116.6120368187997 1116.6109299358602 93.195 2 -2.0908547246385147 0.4580063592664361 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'ABCA13|p.R2868Sfs*7|1|0.09|ENSG00000179869|chr7:48279798-48279799|AA/-|frameshift_variant', 'ABCA13|p.T1992Sfs*21|1|0.12|ENSG00000179869|chr7:48275640-48275641|-/GCTC|frameshift_variant', 'ABCA13|p.V1886Wfs*4|1|0.45|ENSG00000179869|chr7:48275317-48275317|G/-|frameshift_variant'] 112926 11830 TLLHFDASFF True PC9_epitope_Rep3 1196.5866099165999 1196.58496490379 50.524 3 -2.0910281863816143 0.4580063592664361 1.0 ['ENSG00000148248|ENST00000371989|SURF4'] 112215 18090 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 79.274 2 -2.0912689283679105 0.458018862874822 1.0 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 11244 8820 DEELLDSTFSW True NCI_RA007_Epitope_Rep1 1340.57722700136 1340.57612993586 38.308 2 -2.091488903075941 0.458018862874822 1.0 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 6666 19649 APWVCLQKKL True NCI_RA007_Epitope_Rep2 1184.6739854523598 1184.67347496793 81.379 1 -2.0915303180870204 0.458018862874822 1.0 ['ENST00000361436.9_1_9:130211929-130213053:-|nuORF'] 65165 24582 LQPKPVVL True H1975_Epitope_Rep3 892.5745886809199 892.57348993586 102.29 2 -2.091600628168988 0.458018862874822 1.0 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000495579.5_1_6:32088425-32095984:-|nuORF'] 122943 21013 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 91.081 2 -2.092382088944071 0.4580888965015201 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 26066 25157 FGKVKVGK True NCI_RA007_Epitope_Rep1 861.5436229058098 861.54252993586 104.1 2 -2.092756909133754 0.45811610803635466 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 122953 21135 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 88.317 2 -2.0929887776121094 0.45813931083207554 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 125630 24566 VKKRKEKTA True PC9_epitope_Rep4 1086.6873270173799 1086.68677496793 102.98 1 -2.093025288890963 0.45813931083207554 1.0 ['ENSG00000124784|ENST00000379834|RIOK1'] 114598 24922 TQDNPPVF True PC9_epitope_Rep2 916.4290466460399 916.4279499358599 101.53 2 -2.0930714192774342 0.45813931083207554 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 81662 25324 PLLPLIWQKFF True PC9_epitope_Rep2 1400.8220295850394 1400.82092993586 103.08 2 -2.093148090618175 0.45813931083207554 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 135248 22871 WFLNRKIIIH True PC9_epitope_Rep4 1338.79246079226 1338.79081490379 96.191 3 -2.0932284680858966 0.458140207024267 1.0 ['ENST00000311806.7_1_3:38295131-38295401:+|nuORF'] 64000 22821 LNWWRRRKAR True PC9_epitope_Rep2 1440.8327028948 1440.8316099358601 93.269 2 -2.093547426409515 0.458140207024267 1.0 ['ENSG00000171714|ENST00000324559|ANO5'] 87327 23806 QPRPRTRPL True PC9_epitope_Rep2 1119.66250925187 1119.6619749679298 97.039 1 -2.0938479233618086 0.4581634072979887 1.0 ['ENST00000454783.5_1_6:31539934-31540036:+|nuORF'] 93339 16217 RPVSQPCC True NCI_RA007_Epitope_Rep3 888.3945927969598 888.39348993586 71.48 2 -2.094061233307642 0.4581634072979887 1.0 ['nc|ENSG00000117407|Q5T4W7-2|ARTN', 'ENSG00000117407|ENST00000372359|ARTN', 'nc|ENSG00000117407|Q5T4W7-3|ARTN'] 62238 17519 LLFDPRTL True PC9_epitope_Rep4 973.55966689277 973.55856993586 75.39 2 -2.0941695933026585 0.4581634072979887 1.0 ['ENST00000520633.1_1_8:67922943-67940757:-|nuORF', 'ENST00000519919.5_1_8:67922943-67926728:-|nuORF', 'ENST00000521040.5_1_8:67876548-67926755:-|nuORF', 'nc|ENSG00000178125|Q7Z4L9-2|PPP1R42', 'ENSG00000178125|ENST00000685739|PPP1R42', 'nc|ENSG00000178125|Q7Z4L9|PPP1R42'] 127232 14698 VLWLLRYRMRR True NCI_RA007_Epitope_Rep4 1560.9187410178797 1560.91764993586 63.952 2 -2.09423693451694 0.4581634072979887 1.0 ['MRGPRX4|p.G53R|1|0.46|ENSG00000179817|chr11:18173413-18173413|G/C|missense_variant'] 114599 24190 TQDNPPVF True PC9_epitope_Rep4 916.4290466460399 916.4279499358599 101.52 2 -2.0945607948911396 0.4581692070560027 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 97051 19030 SDCVTIAT True NCI_RA007_Epitope_Rep5 808.36366950816 808.36256993586 80.055 2 -2.094663969933166 0.45817500668985817 1.0 ['ENSG00000197353|ENST00000359228|LYPD2'] 3735 13521 AGSLHPGA True NCI_RA007_Epitope_Rep1 708.3554877829599 708.35493496793 56.602 1 -2.0949866810768083 0.45820221351657997 1.0 ['ENST00000423473.6_1_17:20898860-20901274:+|nuORF'] 88140 15183 QRSHTKEKPYK True NCI_RA007_Epitope_Rep2 1400.75244645508 1400.7513499358602 63.75 2 -2.095208800006187 0.45820801267299605 1.0 ['ENSG00000197937|ENST00000334197|ZNF347', 'nc|ENSG00000197937|Q96SE7-2|ZNF347'] 73644 18291 MYAFKKLEKKR True NCI_RA007_Epitope_Rep5 1440.82752597164 1440.82642993586 77.156 2 -2.0953245862997605 0.4582089072985904 1.0 ['ENST00000400595.3_1_13:21893667-21894339:+|nuORF'] 142422 10162 YYFCRWYRNRK True NCI_RA007_Epitope_Rep2 1653.7986854548496 1653.79758993586 44.116 2 -2.0953542959653215 0.4582089072985904 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 69239 5738 LTSTNPKA True PC9_epitope_Rep2 830.4497820906199 830.44868993586 27.462 2 -2.095569656820989 0.4582361125976667 1.0 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2'] 49876 21614 KIFRKGRPY True PC9_epitope_Rep6 1163.6927467509897 1163.69110490379 96.016 3 -2.096070326061346 0.45827402040008136 1.0 ['ENSG00000155660|ENST00000652332|PDIA4'] 119652 13942 VAVAVTRSL True PC9_epitope_Rep4 914.5549158655 914.55380993586 61.532 2 -2.0962609699123833 0.45828160452074146 1.0 ['ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 32471 24978 GGAVFKKD True PC9_epitope_Rep3 820.4443027873599 820.4437549679301 101.42 1 -2.0963164970219683 0.45828160452074146 1.0 ['ENSG00000159079|ENST00000290155|CFAP298'] 122232 11064 VGAPSVSF True PC9_epitope_Rep6 762.39120458534 762.39010993586 53.476 2 -2.0963812840426512 0.45828160452074146 1.0 ['ENST00000421433.5_1_2:233595869-233599942:+|nuORF', 'ENST00000429187.5_3_2:233595869-233599942:+|nuORF'] 48643 26403 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 107.89 3 -2.0964421496712573 0.45828160452074146 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 82778 21080 PRNGPGGP True PC9_epitope_Rep1 750.3772858566999 750.37673496793 85.918 1 -2.0966122183004368 0.45828160452074146 1.0 ['ENST00000406902.5_1_22:47073608-47073866:+|nuORF'] 93664 17268 RQRRPRQIEA True NCI_RA007_Epitope_Rep5 1308.7486984873196 1308.74760993586 73.194 2 -2.096904045454363 0.45828740220683456 1.0 ['ENSG00000103657|ENST00000443617|HERC1'] 80822 23730 PHPGVGLT True NCI_RA007_Epitope_Rep5 776.4180880395201 776.41698993586 98.619 2 -2.0969734790603285 0.4582989972067338 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2'] 72093 23305 MFDPVMEI True NCI_RA007_Epitope_Rep5 980.43472627344 980.43362993586 96.928 2 -2.0972074917215053 0.4582989972067338 1.0 ['ENSG00000174106|ENST00000308330|LEMD3', 'ENST00000544506.1_1_12:65637232-65639560:+|nuORF'] 87184 16468 QPHPIDPLLKS True NCI_RA007_Epitope_Rep3 1243.69247196747 1243.6913699358602 72.554 2 -2.097545773386338 0.45830479452054795 1.0 ['nc|ENSG00000144712|O75155-2|CAND2', 'ENSG00000144712|ENST00000456430|CAND2'] 80338 5489 PGGGPGKG True H1975_Epitope_Rep1 625.31837399825 625.31782496793 26.174 1 -2.097974998316506 0.4583377924273881 1.0 ['ENST00000485392.5_1_6:32120937-32122037:-|nuORF', 'ENST00000486917.1_1_6:32120937-32121639:-|nuORF', 'ENST00000428778.5_1_6:32119931-32122037:-|nuORF'] 125118 23484 VIFPDVSH True NCI_RA007_Epitope_Rep3 912.4705175352001 912.46942993586 101.91 2 -2.0980644339233905 0.4583377924273881 1.0 ['ENST00000381482.7_1_20:2125208-2125481:+|nuORF'] 116068 12933 TSPRTLSVP True PC9_epitope_Rep3 956.5290950404799 956.52798993586 54.77 2 -2.098269441316685 0.45835429085110707 1.0 ['ENSG00000103355|ENST00000682474|PRSS33'] 72199 20747 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 86.776 2 -2.098666539379499 0.45837078892170713 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 135681 25882 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 109.71 3 -2.0990490898712033 0.4583774760024399 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 27448 18022 FLYSILIAK True PC9_epitope_Rep2 1066.6426682407398 1066.6415699358602 74.627 2 -2.099184867583353 0.4583774760024399 1.0 ['ENSG00000163328|ENST00000392552|GPR155'] 92307 23739 RLLLRESE True PC9_epitope_Rep2 1014.5821932425 1014.58108993586 96.784 2 -2.0992146653118477 0.4583774760024399 1.0 ['ENST00000305997.7_1_2:8996496-8996592:-|nuORF'] 112219 18955 TKKTTTDLKK True NCI_RA007_Epitope_Rep4 1162.6921376142998 1162.69104993586 81.987 2 -2.0993672259319736 0.45839397311873986 1.0 ['CASP8AP2|p.C1805Vfs*3|1|0.16|ENSG00000118412|chr6:89868702-89868702|A/-|frameshift_variant', 'ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 81735 23951 PLPCSHPA True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 99.502 2 -2.0996094181368297 0.4584055644729802 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 119981 10261 VDPSFLAA True PC9_epitope_Rep5 818.4174193331799 818.41632993586 44.456 2 -2.0996118828826873 0.4584055644729802 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.H3910Tfs*14|1|0.52|ENSG00000086758|chrX:53538985-53538985|G/-|frameshift_variant', 'HUWE1|p.P2977H|1|0.17|ENSG00000086758|chrX:53551432-53551432|G/T|missense_variant'] 140092 23559 YQLKVLGL True PC9_epitope_Rep6 932.5695033004798 932.56840993586 103.76 2 -2.0997334309736035 0.4584224942223744 1.0 ['ENST00000368886.9_1_10:124754038-124754206:-|nuORF'] 122938 21139 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 91.936 2 -2.0997649627253385 0.4584224942223744 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 78817 4934 PAAYRRAH True PC9_epitope_Rep6 940.4991323248798 940.49802993586 26.546 2 -2.0998047026827202 0.4584224942223744 1.0 ['nc|ENSG00000230366|P59020|DSCR9'] 63248 17946 LLSLKKKMK True H1975_Epitope_Rep2 1087.7151219883501 1087.71457496793 74.35 1 -2.1000875554242753 0.4584224942223744 1.0 ['nc|ENSG00000151687|Q7Z5J8-3|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-2|ANKAR', 'ENSG00000151687|ENST00000684021|ANKAR', 'ENST00000461516.5_1_2:190554359-190560904:+|nuORF'] 121008 5671 VEPWDPRWQDS True H1975_Epitope_Rep3 1413.6313282628898 1413.6302299358601 26.844 2 -2.1002107439112887 0.4584224942223744 1.0 ['ENST00000607166.1_1_10:31607104-31607347:-|nuORF'] 126649 24489 VLNRKEKT True PC9_epitope_Rep2 986.58727862294 986.58618993586 99.787 2 -2.1006740575858363 0.4584224942223744 1.0 ['ENSG00000173258|ENST00000309235|ZNF483'] 22910 17317 EVEDCYERE True H1975_Epitope_Rep2 1170.44991831326 1170.4488299358602 71.904 2 -2.1007511612064107 0.4584224942223744 1.0 ['ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532|DMD', 'DMD|p.H1690Tfs*31|1|0.14|ENSG00000198947|chrX:32364668-32364668|G/-|frameshift_variant', 'DMD|p.G1635Efs*4|1|0.07|ENSG00000198947|chrX:32365141-32365141|C/-|frameshift_variant', 'DMD|p.E899Rfs*50|1|0.08|ENSG00000198947|chrX:32485027-32485027|C/-|frameshift_variant', 'DMD|p.E827Sfs*19|1|0.14|ENSG00000198947|chrX:32491420-32491420|C/-|frameshift_variant', 'ENST00000488902.5_1_X:32235174-33229429:-|nuORF'] 11656 24095 DGPGNTLAH True H1975_Epitope_Rep2 880.4038945273601 880.40278993586 99.214 2 -2.100872682168002 0.4584224942223744 1.0 ['ENST00000533366.5_1_11:102395628-102401431:-|nuORF', 'ENSG00000137673|ENST00000260227|MMP7'] 52925 23091 KPGKMFVLR True PC9_epitope_Rep4 1074.6372060208198 1074.63610993586 97.041 2 -2.1009461243426517 0.4584224942223744 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 63982 16631 LNVRKAAHEAL True NCI_RA007_Epitope_Rep3 1220.6989543302398 1220.6978499358602 73.2 2 -2.1010334778829893 0.4584224942223744 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 121911 15624 VFRNLRER True NCI_RA007_Epitope_Rep5 1088.6203100867199 1088.61920993586 66.806 2 -2.1011595638765783 0.4584224942223744 1.0 ['ENST00000432610.1_1_10:22896825-22898637:-|nuORF', 'ENST00000422321.5_1_10:22856588-22898637:-|nuORF', 'nc|ENSG00000276293|P78356-2|PIP4K2B', 'nc|ENSG00000150867|P48426-2|PIP4K2A', 'ENSG00000150867|ENST00000376573|PIP4K2A', 'ENSG00000276293|ENST00000619039|PIP4K2B'] 10279 15176 CCGFRDHKYC True NCI_RA007_Epitope_Rep5 1230.4732541238197 1230.47161490379 65.058 3 -2.101188605839808 0.4584224942223744 1.0 ['ENST00000401050.7_1_1:53099138-53105680:+|nuORF', 'nc|ENSG00000182183|Q6UWV7-2|SHISAL2A', 'ENST00000440303.5_1_1:53099138-53125209:+|nuORF', 'ENSG00000182183|ENST00000517870|SHISAL2A'] 75488 22988 NKLFWIRV True PC9_epitope_Rep5 1074.6338348925399 1074.6327299358602 93.414 2 -2.101206234938338 0.4584224942223744 1.0 ['ENSG00000130150|ENST00000380492|MOSPD2', 'nc|ENSG00000130150|Q8NHP6-2|MOSPD2'] 56214 23216 LCFPRGVA True PC9_epitope_Rep4 861.4530936492499 861.45198993586 97.531 2 -2.101415194985014 0.4584224942223744 1.0 ['ENST00000525619.5_1_8:144772228-144772294:+|nuORF', 'ENST00000526970.5_1_8:144767209-144773249:+|nuORF', 'ENST00000533031.5_1_8:144766681-144773252:+|nuORF'] 71633 18486 MDRFFPLVPDL True PC9_epitope_Rep6 1348.6849440588799 1348.68384993586 83.746 2 -2.101706750645408 0.4584282886642059 1.0 ['nc|ENSG00000156239|Q9Y5N5-2|N6AMT1', 'ENSG00000156239|ENST00000303775|N6AMT1'] 127178 20682 VLVGFALY True PC9_epitope_Rep4 880.5058404147599 880.50474993586 87.714 2 -2.1020838530283847 0.45845548113752593 1.0 ['ENST00000523219.1_1_5:159833399-159834623:-|nuORF', 'ENST00000520841.1_1_5:159833399-159835410:-|nuORF'] 56266 24496 LCWKKVDLG True H1975_Epitope_Rep1 1060.57393705792 1060.57282993586 101.53 2 -2.102583312359433 0.4584777677921856 1.0 ['ENSG00000118496|ENST00000237281|FBXO30'] 27054 4261 FLFFLVIYTLT True PC9_epitope_Rep1 1375.7791617135497 1375.77751490379 21.282 3 -2.102599621193655 0.4584777677921856 1.0 ['ENSG00000149133|ENST00000278409|OR5F1', 'OR5F1|p.P183Hfs*12|1|0.08|ENSG00000149133|chr11:55994078-55994078|G/-|frameshift_variant'] 103363 19658 SPPGPPRK True H1975_Epitope_Rep3 834.47118624154 834.47008993586 82.345 2 -2.102740758435992 0.4584942601290267 1.0 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1'] 135257 19904 WFPVTQSP True NCI_RA007_Epitope_Rep5 960.4705175351999 960.46942993586 83.475 2 -2.102914265830675 0.4585000534930994 1.0 ['ENST00000304733.7_1_16:90071337-90071556:-|nuORF'] 93136 8244 RPPHPWRTV True PC9_epitope_Rep1 1144.62539546716 1144.62373490379 36.544 3 -2.1029783342256065 0.4585058467332114 1.0 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5'] 123497 15553 VGPGLQGSP True NCI_RA007_Epitope_Rep5 810.42356734278 810.42246993586 66.523 2 -2.1032195607905266 0.45851163984936666 1.0 ['nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1'] 64643 18343 LPTQQVRRSSR True PC9_epitope_Rep2 1326.7480297809798 1326.74638490379 75.886 3 -2.103394187459497 0.4585174328415692 1.0 ['ENSG00000102098|ENST00000251900|SCML2'] 16123 5314 EEANLGLP True PC9_epitope_Rep6 841.4181476091699 841.41704993586 28.272 2 -2.1035637040963846 0.4585183204065258 1.0 ['ENSG00000152270|ENST00000282096|PDE3B', 'nc|ENSG00000152270|Q13370-2|PDE3B'] 80323 5245 PGGGGAAS True NCI_RA007_Epitope_Rep5 572.25543938852 572.25489496793 26.873 1 -2.1036554071592586 0.4585183204065258 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B'] 78521 24537 NYPNIFRIS True NCI_RA007_Epitope_Rep1 1122.5821932425 1122.58054490379 101.64 3 -2.1039363335653998 0.45852990575221714 1.0 ['ENSG00000183862|ENST00000329903|CNGA2', 'CNGA2|p.G533Afs*28|1|0.31|ENSG00000183862|chrX:151744099-151744099|G/-|frameshift_variant', 'ENSG00000198515|ENST00000514170|CNGA1'] 94856 9399 RSWVYSPLHY True NCI_RA007_Epitope_Rep4 1306.64585612822 1306.64474993586 43.008 2 -2.1040233398439065 0.45852990575221714 1.0 ['ENSG00000186111|ENST00000335312|PIP5K1C'] 36774 18147 GVKSSSVM True H1975_Epitope_Rep2 793.40038937005 793.3998449679301 75.214 1 -2.1041162029973526 0.45853569823915785 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant'] 30350 22631 GAASRFVK True NCI_RA007_Epitope_Rep5 834.47118624154 834.47008993586 94.233 2 -2.104306364510735 0.45855307495640824 1.0 ['ENSG00000197223|ENST00000410067|C1D'] 121885 13048 VFPNLRVA True PC9_epitope_Rep4 914.5337864980999 914.53268993586 58.082 2 -2.104352242973669 0.45855307495640824 1.0 ['ENST00000301732.9_1_16:2379695-2379815:-|nuORF'] 21952 12729 ESEDRLNRLDK True PC9_epitope_Rep5 1373.68990576817 1373.68880993586 53.969 2 -2.104390061501959 0.45855307495640824 1.0 ['ENSG00000118292|ENST00000369099|C1orf54'] 61424 12189 LIVGVKKG True H1975_Epitope_Rep2 812.5483739330799 812.54726993586 51.966 2 -2.104509998115523 0.45856956419417644 1.0 ['ENSG00000162040|ENST00000454677|HS3ST6', 'HS3ST6|p.L258Cfs*29|1|0.28|ENSG00000162040|chr16:1911898-1911898|G/-|frameshift_variant', 'ENSG00000122254|ENST00000261374|HS3ST2', 'HS3ST6|p.N199Tfs*3|1|0.09|ENSG00000162040|chr16:1912076-1912076|C/-|frameshift_variant', 'HS3ST2|p.A117D|1|0.43|ENSG00000122254|chr16:22814960-22814960|C/A|missense_variant'] 112823 14669 TLILPRLQQE True NCI_RA007_Epitope_Rep5 1209.7081220316102 1209.70648490379 63.092 3 -2.104724284418195 0.4585811475760558 1.0 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6'] 82257 8416 PPFPGPCA True NCI_RA007_Epitope_Rep3 784.3577962820799 784.35724496793 40.195 1 -2.1047581667979482 0.4585811475760558 1.0 ['ENST00000559946.1_1_14:103016683-103021286:+|nuORF'] 141047 22427 YSLPRTWG True H1975_Epitope_Rep2 978.49231560894 978.49120993586 92.681 2 -2.105330166146612 0.4586199150684052 1.0 ['nc|ENSG00000259009|P0DV77|TPRX2'] 110825 21508 TGPHCPLP True H1975_Epitope_Rep2 820.39015903952 820.38906993586 88.988 2 -2.1053503552335835 0.4586199150684052 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 137640 15771 YEHWLYYLD True PC9_epitope_Rep6 1300.57643915572 1300.57534993586 72.905 2 -2.1053590595065255 0.4586199150684052 1.0 ['SFMBT1|p.A585Gfs*4|1|0.17|ENSG00000163935|chr3:52911155-52911156|-/C|frameshift_variant', 'nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 64803 24032 LQCYLFLRSV True PC9_epitope_Rep4 1240.66381469148 1240.6627099358602 100.91 2 -2.105607923972516 0.4586470990929317 1.0 ['ENST00000209875.8_1_12:54628482-54628572:-|nuORF'] 17904 10227 EIAEAYLG True PC9_epitope_Rep3 864.4228986364399 864.42180993586 44.289 2 -2.10601820717747 0.458658680072735 1.0 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 18088 9321 EIHRELRPQG True PC9_epitope_Rep5 1233.65781779425 1233.65672993586 40.806 2 -2.106201570129182 0.458658680072735 1.0 ['ENSG00000142684|ENST00000374266|ZNF593'] 57972 5315 LEGSVGRD True NCI_RA007_Epitope_Rep1 831.40864555463 831.40754993586 24.752 2 -2.106338818906374 0.4586644703768277 1.0 ['ENST00000332065.9_1_17:74078001-74078805:-|nuORF'] 52913 24878 KPGILLLTT True NCI_RA007_Epitope_Rep5 954.6113681124601 954.61026993586 103.19 2 -2.1064877959009958 0.4586737967914439 1.0 ['STK11|p.N181I|1|0.43|ENSG00000118046|chr19:1220450-1220450|A/T|missense_variant'] 38672 23907 HFTAECRFKE True NCI_RA007_Epitope_Rep5 1266.5815416194998 1266.5798849037901 99.326 3 -2.1064987977097966 0.4586737967914439 1.0 ['ENST00000575310.1_1_17:7324913-7346173:+|nuORF', 'ENST00000575331.1_1_17:7344773-7346173:+|nuORF', 'ENSG00000161958|ENST00000293829|FGF11'] 112260 19634 TKRKEVKRY True H1975_Epitope_Rep3 1206.71968977482 1206.71858993586 82.248 2 -2.1066033966581053 0.4586737967914439 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 37139 6550 GVQCFSRYP True PC9_epitope_Rep5 1055.48585032951 1055.48474993586 30.168 2 -2.106668682703255 0.4586737967914439 1.0 ['CON__Q9U6Y5'] 129836 9567 VRRPAAPH True PC9_epitope_Rep4 902.51986776946 902.5193149679301 44.417 1 -2.1066782612858557 0.4586737967914439 1.0 ['ENST00000591369.5_1_17:76419989-76422610:-|nuORF'] 117733 22972 TVVEKYKIYWV True PC9_epitope_Rep4 1426.7860379991398 1426.7849499358601 96.582 2 -2.1071659254361856 0.4586737967914439 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 142804 5831 YYSFIHLSF True PC9_epitope_Rep4 1175.56514619603 1175.56351490379 29.294 3 -2.1071915925353575 0.4586737967914439 1.0 ['nc|ENSG00000142405|P59046-4|NLRP12', 'nc|ENSG00000142405|P59046-3|NLRP12', 'nc|ENSG00000142405|P59046-6|NLRP12', 'nc|ENSG00000142405|P59046-2|NLRP12', 'NLRP12|p.T1013Nfs*29|1|0.27|ENSG00000142405|chr19:53795919-53795920|-/T|frameshift_variant', 'ENSG00000142405|ENST00000324134|NLRP12', 'nc|ENSG00000142405|P59046-7|NLRP12'] 102034 5123 SLQTRIVIQA True PC9_epitope_Rep4 1127.6662572196299 1127.6646149037902 26.363 3 -2.1072083994311397 0.4586737967914439 1.0 ['ENSG00000114030|ENST00000344337|KPNA1'] 31339 12301 GDLWLLVPP True H1975_Epitope_Rep1 1008.5644179200399 1008.56332993586 52.343 2 -2.107298439688772 0.4586737967914439 1.0 ['ENST00000339142.6_2_17:77020254-77040169:+|nuORF'] 27616 20234 FNVKFGRTTCT True NCI_RA007_Epitope_Rep5 1272.6284918119197 1272.62683490379 84.77 3 -2.1076599625989783 0.4586906773317364 1.0 ['ENSG00000170367|ENST00000304710|CST5'] 135687 26360 WLPTMRNLF True PC9_epitope_Rep5 1176.6113851958 1176.60973490379 107.26 3 -2.1076975111218315 0.4586906773317364 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 123362 10541 VGMATMILTLL True PC9_epitope_Rep2 1161.6501387732899 1161.6484949037902 45.866 3 -2.1078525737333185 0.4586906773317364 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 55628 8271 LAKAHPLARAP True PC9_epitope_Rep5 1143.68766137055 1143.68602490379 36.756 3 -2.108076660386244 0.4586906773317364 1.0 ['CON__Q3SZV7'] 131688 7876 VTNELRVFH True H1975_Epitope_Rep3 1113.59309227937 1113.59198993586 35.271 2 -2.1081662262492267 0.4586906773317364 1.0 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 127702 20536 VPAHEMPT True NCI_RA007_Epitope_Rep5 880.41128840692 880.41018993586 85.933 2 -2.1082257106559847 0.4586906773317364 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 34445 22928 GPKGKAKS True NCI_RA007_Epitope_Rep4 771.46028720467 771.45918993586 99.569 2 -2.108586098658926 0.4586906773317364 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 100130 24083 SISWPHLLPKP True PC9_epitope_Rep2 1273.71829279249 1273.71664490379 98.137 3 -2.1086444709055336 0.4586906773317364 1.0 ['ENST00000459703.5_1_6:36709837-36709960:-|nuORF'] 34296 18493 GPAHTHPE True H1975_Epitope_Rep2 844.3827651599601 844.38166993586 76.736 2 -2.108660887290182 0.4586906773317364 1.0 ['CNGA4|p.V128Gfs*67|1|0.08|ENSG00000132259|chr11:6240176-6240189|GTCTACGTGCGGCT/-|frameshift_variant'] 121095 6583 VERFHENPA True H1975_Epitope_Rep3 1097.52540664237 1097.5243099358602 30.278 2 -2.1087273535663114 0.4586906773317364 1.0 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 129166 23438 VQRVLKYPL True PC9_epitope_Rep6 1114.6862643882198 1114.6851699358601 103.26 2 -2.1087646314511423 0.4586906773317364 1.0 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2', 'nc|ENSG00000146426|Q8IVF5-3|TIAM2'] 136927 21818 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 91.05 2 -2.1087818751919283 0.4586906773317364 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 26725 9720 FIWRRMKTMWF True H1975_Epitope_Rep1 1600.8159157421198 1600.81480993586 42.316 2 -2.108801040810746 0.4586906773317364 1.0 ['ENST00000442563.5_2_7:66235310-66235424:+|nuORF'] 31734 11963 GEGSHSSR True H1975_Epitope_Rep3 815.3521933076701 815.35164496793 51.174 1 -2.1088992426437945 0.4586906773317364 1.0 ['ZBTB4|p.G750E|1|0.47|ENSG00000174282|chr17:7462733-7462733|C/T|missense_variant'] 87701 7150 QQYRWYQMLYQ True H1975_Epitope_Rep1 1605.73983316605 1605.7387299358602 32.526 2 -2.109194573387868 0.45869911570663274 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000563874.5_2_16:28488839-28493793:-|nuORF', 'ENST00000565140.5_3_16:28489128-28499933:-|nuORF', 'nc|ENSG00000261832|Q13286-5|CLN3'] 91336 19351 RGRWGRKNR True NCI_RA007_Epitope_Rep1 1184.6751396242398 1184.67349490379 79.425 3 -2.1092786839300515 0.45869911570663274 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 138991 19141 YKRIYVKFIEN True PC9_epitope_Rep5 1471.8187351097497 1471.8170849037901 78.66 3 -2.109315670024952 0.45869911570663274 1.0 ['nc|ENSG00000060749|Q2KHR3|QSER1', 'ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 22004 5990 ESHIKTKI True PC9_epitope_Rep6 954.54983048506 954.54872993586 31.36 2 -2.109315856373752 0.45869911570663274 1.0 ['ENSG00000169340|ENST00000302451|PDILT'] 69912 8402 LVIVGLLMF True H1975_Epitope_Rep1 1003.61401096475 1003.61290993586 37.246 2 -2.1094598448824913 0.45869911570663274 1.0 ['ENSG00000113070|ENST00000230990|HBEGF'] 61799 12951 LLARARDKRES True NCI_RA007_Epitope_Rep1 1313.7527808082498 1313.7516899358602 54.367 2 -2.1094794059420594 0.45869911570663274 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4', 'nc|ENSG00000130529|Q8TD43-3|TRPM4'] 124337 11479 VGTSFGLP True H1975_Epitope_Rep1 776.4068546494799 776.40574993586 49.137 2 -2.1097951899533536 0.45869911570663274 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'ENST00000503716.5_1_4:151186876-151502511:-|nuORF'] 113976 23557 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 97.923 2 -2.109928631896458 0.458700882117081 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 93890 18078 RRFKPAGR True NCI_RA007_Epitope_Rep1 986.5886160356198 986.58750993586 74.46 2 -2.109947312023159 0.458700882117081 1.0 ['ENST00000529840.5_1_11:71189446-71191828:+|nuORF'] 125487 16371 VIYERHQV True PC9_epitope_Rep2 1042.5559784946602 1042.55488993586 68.215 2 -2.1100589974069015 0.458700882117081 1.0 ['ENST00000491592.1_1_2:55200947-55201100:-|nuORF'] 122963 23921 VGHSAGHP True PC9_epitope_Rep4 760.36163579256 760.36052993586 100.46 2 -2.1103968552668007 0.458700882117081 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 36727 6812 GVKFMPYTTYL True H1975_Epitope_Rep3 1318.6631459851399 1318.66204993586 31.156 2 -2.1106941301641444 0.458709711903362 1.0 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'ENST00000502311.1_1_4:493115-495466:+|nuORF', 'nc|ENSG00000174227|Q5H8A4-3|PIGG'] 101369 15488 SLKAANAA True NCI_RA007_Epitope_Rep1 744.41300265908 744.4124549679301 64.328 1 -2.1107341601324516 0.458709711903362 1.0 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ABCF1|p.R331Afs*5|1|0.53|ENSG00000204574|chr6:30583682-30583682|C/-|frameshift_variant'] 20228 5137 ENLIYTYD True PC9_epitope_Rep1 1029.46549172441 1029.46438993586 24.611 2 -2.110780880093997 0.458709711903362 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 135992 25610 WQQRKPKG True PC9_epitope_Rep1 1026.5722972651397 1026.57120993586 103.53 2 -2.110855143714425 0.458709711903362 1.0 ['ENSG00000205810|ENST00000396439|KLRC3', 'nc|ENSG00000205810|Q07444-2|KLRC3'] 117473 8699 TVQYAFFHWL True NCI_RA007_Epitope_Rep2 1310.64479349906 1310.64368993586 38.486 2 -2.1109769305239703 0.458709711903362 1.0 ['OR2B11|p.V107F|1|0.57|ENSG00000177535|chr1:247451664-247451664|C/A|missense_variant'] 71605 12810 MDKDGYFWFVA True PC9_epitope_Rep1 1377.60635938501 1377.6052699358602 54.148 2 -2.1111374315744595 0.458709711903362 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 113423 19498 TLSGVHKAKF True PC9_epitope_Rep1 1086.61857875122 1086.61807496793 79.818 1 -2.1112519043148077 0.458709711903362 1.0 ['ENST00000482941.1_1_7:33169401-33192318:+|nuORF', 'ENST00000242067.10_1_7:33169401-33192318:+|nuORF'] 104341 19117 SQISAKEQIIL True NCI_RA007_Epitope_Rep5 1228.7027022979998 1228.70160993586 80.404 2 -2.1112863177749035 0.458709711903362 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 33275 24738 GKKKHRRRPS True PC9_epitope_Rep2 1248.7639546286398 1248.76284993586 100.83 2 -2.1113410230892486 0.458709711903362 1.0 ['ENSG00000186834|ENST00000332499|HEXIM1'] 38881 23236 HHEKKKAGYI True NCI_RA007_Epitope_Rep4 1209.6618405455297 1209.66019490379 100.87 3 -2.1114547684565252 0.458709711903362 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 94012 23285 RRKPFPFK True PC9_epitope_Rep4 1074.6450682825798 1074.64396993586 97.82 2 -2.1115685096335497 0.458709711903362 1.0 ['ENSG00000142623|ENST00000375471|PADI1'] 63648 9745 LMQIREFLEYR True PC9_epitope_Rep6 1496.7809697020398 1496.7793349037902 47.906 3 -2.111600469371505 0.458709711903362 1.0 ['ENST00000494357.1_1_7:99170104-99170224:+|nuORF'] 133369 21027 VVVGSVVI True NCI_RA007_Epitope_Rep4 770.49019035062 770.48908993586 91.143 2 -2.1116260361306733 0.458709711903362 1.0 ['ENSG00000180998|ENST00000321662|GPR137C'] 126672 18563 VLPAAQLR True H1975_Epitope_Rep2 866.5337864981 866.53268993586 77.028 2 -2.111729881358836 0.458709711903362 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 114155 17904 TPKKNKHKR True NCI_RA007_Epitope_Rep3 1135.6938093801498 1135.6927099358602 78.462 2 -2.1118053152628775 0.458709711903362 1.0 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF'] 118937 23817 VADRQLVR True PC9_epitope_Rep1 955.5563128478299 955.55520993586 96.409 2 -2.111941055538396 0.458709711903362 1.0 ['ENST00000478486.5_1_6:31940188-31947331:+|nuORF', 'ENST00000469907.1_1_6:31940369-31948823:+|nuORF', 'ENST00000479644.1_1_6:31939773-31940810:+|nuORF'] 38310 23995 HEGDHSVP True H1975_Epitope_Rep2 876.37259439908 876.37148993586 98.817 2 -2.112132731846505 0.458709711903362 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 130038 16872 VSASPAVPPL True PC9_epitope_Rep5 936.5280324113199 936.52692993586 69.909 2 -2.1121452364186935 0.458709711903362 1.0 ['SRCAP|p.G1057V|1|0.17|ENSG00000080603|chr16:30720895-30720895|G/T|missense_variant'] 58364 8514 LENIQRDY True H1975_Epitope_Rep1 1049.51417325233 1049.5130699358601 37.679 2 -2.112240368492751 0.458709711903362 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15', 'TEX15|p.N1520Ifs*9|1|0.19|ENSG00000133863|chr8:30844459-30844459|T/-|frameshift_variant', 'TEX15|p.H1574Qfs*18|1|0.21|ENSG00000133863|chr8:30844296-30844296|A/-|frameshift_variant'] 122951 20911 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 87.431 2 -2.1123105310014525 0.458709711903362 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 48969 23226 KEERTKFF True H1975_Epitope_Rep2 1083.5712942056298 1083.57018993586 95.803 2 -2.1124018899780173 0.45871549825754176 1.0 ['ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 138974 1150 YKNGIPYAFAF True H1975_Epitope_Rep3 1289.64445914589 1289.64280490379 6.2186 3 -2.1125731912061494 0.45873197430168794 1.0 ['ENSG00000165078|ENST00000297770|CPA6'] 25267 22929 FDLLFWKRW True PC9_epitope_Rep2 1309.69716342509 1309.6960699358601 93.703 2 -2.112896749729453 0.4587328565778362 1.0 ['ENST00000368134.6_1_6:130537757-130543915:-|nuORF'] 91288 25449 RGPFKKER True H1975_Epitope_Rep3 1016.5879473292798 1016.58737496793 105.87 1 -2.1130354787323364 0.4587328565778362 1.0 ['ENST00000337979.8_1_11:59522641-59522929:+|nuORF'] 73171 23151 MRVKEETH True H1975_Epitope_Rep2 1028.50731405008 1028.5062099358602 95.513 2 -2.113145112873757 0.45874933190807055 1.0 ['ENSG00000151150|ENST00000280772|ANK3'] 124088 4439 VGSMFFPF True PC9_epitope_Rep3 930.4309612223399 930.42986993586 22.172 2 -2.11337846146494 0.45878718559929876 1.0 ['ENST00000310015.10_1_2:174820725-174820848:-|nuORF'] 63436 5171 LLVSAPAP True PC9_epitope_Rep3 766.45889022234 766.45778993586 24.975 2 -2.1134408159398856 0.4587929707542329 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 32544 11190 GGGGGGGF True PC9_epitope_Rep2 564.2292246406801 564.22867496793 48.367 1 -2.1145444666436912 0.45887357968210535 1.0 ['CON__Q3TTY5', 'ENST00000396326.2_1_10:30806804-30806981:-|nuORF', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q5XQN5', 'ENSG00000170185|ENST00000307017|USP38'] 23399 17258 EVSGRIEPS True H1975_Epitope_Rep3 972.4876241513199 972.4870749679301 72.028 1 -2.114597545775637 0.45887936378989674 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 76300 21875 NPPPAPQRV True PC9_epitope_Rep5 974.5297637468199 974.52866993586 89.18 2 -2.1152133304531833 0.45889583667361444 1.0 ['ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A'] 86968 24901 QLWRFLPR True H1975_Epitope_Rep2 1114.63998290214 1114.63888993586 102.35 2 -2.115361939894433 0.4589082824741607 1.0 ['ENSG00000133028|ENST00000255390|SCO1', 'ENST00000579396.1_1_17:10599052-10600824:-|nuORF'] 17903 9356 EIAEAYLG True PC9_epitope_Rep2 864.4228986364399 864.42180993586 41.324 2 -2.1154650278481184 0.4589082824741607 1.0 ['HSPA8|p.G619Rfs*25|1|0.47|ENSG00000109971|chr11:123057820-123057821|-/T|frameshift_variant', 'ENSG00000109971|ENST00000534624|HSPA8', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 102414 24488 SLTLLRKKVW True NCI_RA007_Epitope_Rep5 1242.7812274022199 1242.77959490379 101.66 3 -2.115532591416559 0.4589082824741607 1.0 ['ENST00000508678.1_1_5:14681688-14687767:+|nuORF'] 63242 17076 LLSLDDFNN True H1975_Epitope_Rep2 1049.50293986229 1049.50184993586 70.949 2 -2.11580603106091 0.4589082824741607 1.0 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 35307 17115 GRLNQPLSV True NCI_RA007_Epitope_Rep5 982.5559784946599 982.55488993586 72.606 2 -2.116042695602907 0.4589109175439534 1.0 ['ENST00000604081.1_1_12:54388882-54389314:-|nuORF'] 54072 24013 KVKSPGPH True H1975_Epitope_Rep3 848.4868363056798 848.48572993586 100.07 2 -2.116142538010753 0.4589109175439534 1.0 ['ENST00000510048.1_1_4:74964514-74964837:-|nuORF', 'ENSG00000081041|ENST00000508487|CXCL2'] 76032 19137 NMAGGLRL True NCI_RA007_Epitope_Rep5 830.44325724154 830.44214993586 80.482 2 -2.1161748083041556 0.4589109175439534 1.0 ['ENST00000336279.9_1_X:65384222-65384267:+|nuORF'] 81872 5819 PLRKDDASWL True H1975_Epitope_Rep3 1199.6298717109098 1199.6287699358602 27.405 2 -2.1163361003950434 0.4589109175439534 1.0 ['ENSG00000015532|ENST00000017003|XYLT2'] 131559 6735 VTLDTPMNR True PC9_epitope_Rep3 1045.52262976105 1045.5215299358601 30.929 2 -2.116497241384179 0.4589109175439534 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR', 'ENST00000505710.1_2_4:17492283-17503442:-|nuORF', 'ENST00000511609.1_1_4:17492283-17494024:-|nuORF', 'ENST00000513615.5_1_4:17462419-17503442:-|nuORF', 'ENST00000501943.6_1_4:17488756-17494024:-|nuORF'] 73876 21871 NATKTKLKQ True PC9_epitope_Rep6 1030.61349337078 1030.6123899358602 97.027 2 -2.1165067442794068 0.4589109175439534 1.0 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1'] 110757 22554 TGGPGGLLC True PC9_epitope_Rep2 773.37417462221 773.37362496793 92.245 1 -2.1166632239223713 0.45891670051086936 1.0 ['ENST00000569796.1_1_16:2282158-2283271:+|nuORF'] 10809 11039 CSGDDDDDNDD True PC9_epitope_Rep3 1184.3047702012 1184.3036699358602 47.456 2 -2.116992551705899 0.45893317088289676 1.0 ['ENST00000322002.4_1_2:5834175-5834352:+|nuORF'] 131231 9981 VTETSMQKEI True PC9_epitope_Rep1 1164.5696395231198 1164.5685499358601 43.256 2 -2.117382406094997 0.4589505183285241 1.0 ['ENST00000561186.5_2_15:59323620-59323680:+|nuORF'] 83870 24552 PVPDAICC True PC9_epitope_Rep1 816.3509966494801 816.34988993586 99.299 2 -2.117394533176246 0.4589505183285241 1.0 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF', 'TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant', 'nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3'] 113969 22632 TPAHHPPG True H1975_Epitope_Rep3 812.3929359208399 812.39182993586 94.588 2 -2.1174765712133317 0.4589505183285241 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 32272 18711 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 78.793 2 -2.1177373966509165 0.4589669876350579 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 61706 3082 LKYLKWIQNYF True NCI_RA007_Epitope_Rep2 1514.82857151746 1514.82691490379 16.601 3 -2.117805847232975 0.4589794282660967 1.0 ['ENST00000315554.12_3_1:22379221-22404982:+|nuORF', 'ENST00000344548.7_3_1:22379221-22404982:+|nuORF'] 78020 23406 NVRFLTRQ True PC9_epitope_Rep6 1032.5828619488398 1032.5817699358602 103.14 2 -2.1178961001048116 0.4589794282660967 1.0 ['EPHA3|p.P384T|1|0.28|ENSG00000044524|chr3:89341934-89341934|C/A|missense_variant'] 114156 18578 TPKKNKHKR True NCI_RA007_Epitope_Rep4 1135.6938093801498 1135.6927099358602 80.369 2 -2.1179921973476037 0.4589794282660967 1.0 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF'] 72102 21864 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 91.226 2 -2.117997948760142 0.4589794282660967 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 130031 24979 VSARIVTA True PC9_epitope_Rep3 815.4865019525099 815.4859549679301 101.43 1 -2.1180485033547756 0.45898520988287594 1.0 ['ENST00000471887.1_1_7:18557286-18557502:+|nuORF'] 133077 23530 VVPSPGGM True NCI_RA007_Epitope_Rep4 742.36836096578 742.36781496793 102.09 1 -2.1184873198399106 0.4589967727457308 1.0 ['ENST00000277541.6_1_9:139389036-139389225:-|nuORF'] 32280 23070 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 95.985 2 -2.1186175787559582 0.4589967727457308 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 20489 23209 EPLPLAYA True NCI_RA007_Epitope_Rep2 872.4643695255999 872.46326993586 96.97 2 -2.1189460598657 0.45899764907031415 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 139905 18746 YPVLAPAA True PC9_epitope_Rep3 800.4432401582 800.44214993586 77.329 2 -2.1190524987821595 0.45899764907031415 1.0 ['PUM1-NKAIN1|5|fusion', 'PUM1-NKAIN1|4|fusion', 'nc|ENSG00000134644|Q14671-2|PUM1', 'SNIP1-PUM1|2|fusion', 'SNIP1-PUM1|1|fusion', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'ENST00000490546.1_1_1:31439047-31452930:-|nuORF'] 40934 21580 HSSPEGKEEPE True PC9_epitope_Rep6 1224.5258601348398 1224.5242049037902 95.883 3 -2.1196201970040685 0.45903058280438547 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 82104 22211 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 92.582 2 -2.1196228824320196 0.45903058280438547 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 136932 24578 YAGFHVAL True PC9_epitope_Rep3 876.4493881678 876.44828993586 99.9 2 -2.1203084199285973 0.4590684205464668 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 37715 10527 GVYTLLTT True NCI_RA007_Epitope_Rep5 866.4749342092999 866.4743849679301 47.126 1 -2.1206780904876292 0.4590742007180715 1.0 ['nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 115380 19341 TRKGAGGK True PC9_epitope_Rep3 773.4507851501298 773.44968993586 79.616 2 -2.1211400503348004 0.45910800529982476 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40'] 37818 8444 GYGPHGAP True H1975_Epitope_Rep2 754.3398377188199 754.3392849679301 37.43 1 -2.1211950577165894 0.45910800529982476 1.0 ['SYP|p.Q303H|1|0.09|ENSG00000102003|chrX:49191470-49191470|C/G|missense_variant'] 88329 20582 QSGNLALA True PC9_epitope_Rep6 772.40791727864 772.40682993586 91.897 2 -2.1214374669497365 0.45910800529982476 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 81117 24805 PKDQQQPP True PC9_epitope_Rep3 936.4664947839199 936.46538993586 100.79 2 -2.1217159285484812 0.45910800529982476 1.0 ['nc|ENSG00000197705|Q9P2G3-2|KLHL14', 'ENSG00000197705|ENST00000359358|KLHL14'] 37937 25494 HAAAPGGG True H1975_Epitope_Rep1 636.2979729068401 636.29742496793 105.66 1 -2.121902658419656 0.4591137847396596 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 91708 7641 RKATRRMMMLK True PC9_epitope_Rep2 1420.7941347517196 1420.79248490379 34.76 3 -2.1221207394688553 0.45913286892602245 1.0 ['ENST00000216832.8_1_14:39645780-39646821:+|nuORF'] 131028 4995 VTDRNDNA True PC9_epitope_Rep2 903.40462280335 903.40352993586 24.584 2 -2.122264876277474 0.45913286892602245 1.0 ['nc|ENSG00000240184|Q9UN70-2|PCDHGC3', 'ENSG00000240184|ENST00000308177|PCDHGC3'] 27052 23429 FLFFILVAVR True PC9_epitope_Rep2 1223.7430509883498 1223.74141490379 95.592 3 -2.1222812849340538 0.45913286892602245 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF'] 66918 10144 LSNPAPLL True H1975_Epitope_Rep1 823.48035394291 823.47980496793 43.957 1 -2.1227260158318386 0.45913286892602245 1.0 ['OTUD4|p.T948Nfs*31|1|0.15|ENSG00000164164|chr4:145137932-145137933|-/T|frameshift_variant', 'nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000455611.6_1_4:146049153-146095893:-|nuORF', 'ENST00000237841.5_1_12:3949907-3950609:+|nuORF'] 135688 24801 WLPTMRNLF True PC9_epitope_Rep6 1176.6113851958 1176.60973490379 110.1 3 -2.1227690313672816 0.45913286892602245 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 73393 15369 MTIIPGSS True NCI_RA007_Epitope_Rep5 804.40514039732 804.40404993586 65.823 2 -2.12277698933317 0.45913286892602245 1.0 ['ENSG00000205592|ENST00000454784|MUC19', 'nc|ENSG00000205592|Q7Z5P9-2|MUC19'] 61924 16100 LLDFPEAM True NCI_RA007_Epitope_Rep3 934.4470052093 934.4464549679301 71.028 1 -2.1228464592640623 0.45913286892602245 1.0 ['nc|ENSG00000112659|Q8IWT3-3|CUL9', 'ENSG00000112659|ENST00000252050|CUL9', 'ENST00000515773.5_1_6:43164260-43192180:+|nuORF'] 91868 24085 RKKLYELLY True PC9_epitope_Rep2 1224.72304381976 1224.72139490379 98.144 3 -2.123019919243779 0.4591657941409005 1.0 ['ENST00000565367.5_1_15:55647651-55647789:+|nuORF'] 113974 22898 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 95.298 2 -2.1230555813649317 0.4591657941409005 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 82278 24237 PPGNWPGP True PC9_epitope_Rep3 820.3867879112399 820.38568993586 98.528 2 -2.12335940585451 0.4591822562206861 1.0 ['ENST00000557552.1_1_14:105238371-105239528:-|nuORF'] 60644 23893 LHLACQKG True NCI_RA007_Epitope_Rep5 868.4589073056801 868.45780993586 99.271 2 -2.12348899639587 0.45918803418803417 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 122960 24064 VGHSAGHP True PC9_epitope_Rep3 760.36163579256 760.36052993586 97.847 2 -2.123570386779607 0.459204495678465 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 113975 23309 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 96.943 2 -2.123748810049768 0.4592053673493371 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 113958 20467 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 84.792 2 -2.1237583178780803 0.4592053673493371 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 28323 21060 FRRLFSSW True PC9_epitope_Rep2 1097.57704829241 1097.57647496793 86.463 1 -2.1240561838055143 0.45921114482287084 1.0 ['ENST00000491544.1_1_3:195974480-195997402:-|nuORF'] 35996 14954 GTWFWATD True NCI_RA007_Epitope_Rep1 982.4184819623399 982.41738993586 62.229 2 -2.124239751748577 0.45921692217296084 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 122212 12257 VGAPGGVP True H1975_Epitope_Rep1 652.3544251538 652.3538749679301 52.17 1 -2.1243300977422135 0.45922269939961113 1.0 ['ENST00000392587.6_1_6:110500769-110500865:-|nuORF'] 60318 18452 LGSGVPLPK True PC9_epitope_Rep1 866.52255310806 866.52144993586 75.767 2 -2.1244709064910565 0.4592342534826083 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'nc|ENSG00000186191|P59827-2|BPIFB4'] 75926 8007 NLSEGLINEA True H1975_Epitope_Rep2 1058.52440358286 1058.5233099358602 35.746 2 -2.124613775494378 0.4592342534826083 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.E3467Sfs*14|1|0.04|ENSG00000115464|chr2:61188345-61188345|A/-|frameshift_variant'] 110741 11412 TGGGGGGD True NCI_RA007_Epitope_Rep3 576.21396849936 576.2134249679301 52.014 1 -2.1248536096242585 0.45924003033896316 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 73643 11797 MWTLYCLTDK True NCI_RA007_Epitope_Rep1 1272.58826679272 1272.5876749679298 49.866 1 -2.124933506890048 0.45924580707189405 1.0 ['nc|ENSG00000154040|O75952-5|CABYR', 'ENSG00000154040|ENST00000399496|CABYR'] 122773 12429 VGGPAAHP True H1975_Epitope_Rep2 704.3605731634 704.36002496793 52.894 1 -2.125075986228 0.45925158368140495 1.0 ['nc|ENSG00000220201|P0C6A0-1|ZGLP1', 'ENSG00000220201|ENST00000707000|ZGLP1'] 128178 23297 VPLSRAGR True PC9_epitope_Rep2 854.50863437942 854.50808496793 95.096 1 -2.125086747156523 0.45925332478769426 1.0 ['ENST00000007264.6_1_16:837573-837639:-|nuORF'] 13515 23421 DNNNGWDS True NCI_RA007_Epitope_Rep4 920.32603812948 920.32494993586 101.66 2 -2.1252710127817793 0.45925332478769426 1.0 ['ENSG00000169605|ENST00000377938|GKN1'] 81299 27072 PLAFDPTS True PC9_epitope_Rep2 846.41233395274 846.41122993586 111.54 2 -2.1252953969445234 0.45925332478769426 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 122973 22532 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 99.681 2 -2.1253274377625146 0.45925332478769426 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 99063 17983 SHGFWLKRSSY True H1975_Epitope_Rep2 1366.6782188856598 1366.6771299358602 74.499 2 -2.125656327122311 0.45928133478604544 1.0 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF'] 120959 23015 VEPGLITK True PC9_epitope_Rep1 855.50656869075 855.5060249679301 93.324 1 -2.125697981954237 0.45928133478604544 1.0 ['ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 124615 2704 VGWALGPLG True PC9_epitope_Rep3 868.4806882960798 868.47958993586 14.861 2 -2.1258596173442084 0.45928133478604544 1.0 ['ENST00000431922.1_1_12:6729058-6729289:-|nuORF'] 27631 12510 FPCHHGKGH True PC9_epitope_Rep1 1018.4555532607399 1018.4549749679301 52.988 1 -2.126096242469161 0.4593093429892866 1.0 ['ENST00000520448.5_1_8:24181385-24209525:+|nuORF', 'nc|ENSG00000042980|Q9UKQ2-2|ADAM28', 'ENSG00000042980|ENST00000265769|ADAM28', 'ADAM28|p.G494V|1|0.32|ENSG00000042980|chr8:24335555-24335555|G/T|missense_variant'] 78816 25009 PAAYIQKLK True PC9_epitope_Rep3 1030.61751612206 1030.61640993586 101.54 2 -2.1262723588908212 0.4593093429892866 1.0 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1'] 27152 24647 FLKVHKKAT True PC9_epitope_Rep4 1070.6600496403798 1070.6589499358602 103.3 2 -2.126391663035545 0.4593093429892866 1.0 ['nc|ENSG00000140876|P0C024-2|NUDT7', 'ENST00000564085.5_1_16:77769737-77775844:+|nuORF', 'ENSG00000140876|ENST00000268533|NUDT7'] 15031 23344 DYLPPVDS True PC9_epitope_Rep4 904.417813256 904.41670993586 98.05 2 -2.126663347454749 0.4593217623497997 1.0 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.L1691*|1|0.21|ENSG00000162402|chr1:55101659-55101659|C/-|frameshift_variant'] 122924 21438 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 89.582 2 -2.12676987097777 0.4593217623497997 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 105407 8136 SRSNDTLYIP True PC9_epitope_Rep3 1164.57750178488 1164.57640993586 36.274 2 -2.1269702790462506 0.4593217623497997 1.0 ['ENSG00000143387|ENST00000271651|CTSK'] 84717 20239 QDQEQRIL True PC9_epitope_Rep5 1028.5250722892 1028.52447496793 82.898 1 -2.12715141152732 0.4593217623497997 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 27060 13788 FLFLIVRW True NCI_RA007_Epitope_Rep5 1092.64842232752 1092.6473299358602 59.711 2 -2.127235373792825 0.4593226312922554 1.0 ['ENST00000471405.5_1_7:135366313-135386730:-|nuORF'] 80883 24273 PHVGGSGG True H1975_Epitope_Rep2 666.30853759054 666.3079849679301 99.891 1 -2.127250191847526 0.4593226312922554 1.0 ['ENST00000371851.1_1_9:136857425-136857656:-|nuORF'] 47382 19062 IVIIRLATF True PC9_epitope_Rep5 1044.66955169492 1044.66844993586 78.351 2 -2.12760202617872 0.45933908659802625 1.0 ['ENST00000307729.11_1_10:21884331-21901337:+|nuORF'] 127719 8768 VPAPRGVPAS True PC9_epitope_Rep5 949.5345147740899 949.53340993586 38.668 2 -2.1279576607656647 0.45934486110072736 1.0 ['ENST00000283635.7_2_2:87016528-87018429:-|nuORF', 'ENST00000352580.7_2_2:87013010-87017728:-|nuORF'] 85565 8738 QGESQKVLLHM True NCI_RA007_Epitope_Rep2 1268.65470655976 1268.65360993586 38.635 2 -2.1282275761563905 0.45936131581757983 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'nc|ENSG00000176225|Q86VV8-4|RTTN'] 121566 8006 VFDVTAVN True PC9_epitope_Rep1 863.4388830537499 863.43778993586 35.616 2 -2.1283620642632095 0.4593621838687628 1.0 ['ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-3|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 13901 14632 DQVCVLEWGA True PC9_epitope_Rep1 1118.50664534374 1118.50554993586 61.105 2 -2.1284228641921135 0.4593621838687628 1.0 ['nc|ENSG00000197948|Q86WN1-3|FCHSD1', 'ENSG00000197948|ENST00000435817|FCHSD1', 'ENST00000523856.5_1_5:141026049-141027048:-|nuORF'] 91257 20043 RGGPVRVA True PC9_epitope_Rep6 810.4824196315799 810.48132993586 89.761 2 -2.1287232284581425 0.45939595881925754 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 135771 16523 WMLLKIVQG True NCI_RA007_Epitope_Rep4 1086.6259726307799 1086.62486993586 71.62 2 -2.1287611331543728 0.45939595881925754 1.0 ['ENST00000483681.5_2_3:58200080-58200149:-|nuORF'] 48592 27932 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 117.73 3 -2.1289398601569527 0.45939595881925754 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 20405 8793 EPDDLDDPEL True H1975_Epitope_Rep2 1156.4771786069198 1156.47608993586 38.786 2 -2.1289891475693 0.45939595881925754 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF'] 5885 11597 APGHGHGP True H1975_Epitope_Rep3 728.33542104472 728.3348749679301 49.739 1 -2.1292108264863483 0.4594017322212373 1.0 ['ENST00000546217.1_1_12:7079578-7079788:-|nuORF', 'ENST00000542294.1_1_12:7079337-7079788:-|nuORF', 'ENST00000543465.5_1_12:7078710-7079788:-|nuORF', 'ENST00000546111.5_1_12:7074850-7079788:-|nuORF'] 61860 23461 LLCLHLLIQ True PC9_epitope_Rep6 1064.64162269492 1064.64052993586 103.35 2 -2.129451937720273 0.45941327865526116 1.0 ['ENST00000519416.5_2_8:38706173-38706524:+|nuORF'] 61533 22863 LKFSKGEI True H1975_Epitope_Rep2 920.5331177917599 920.53202993586 94.389 2 -2.1295423432265634 0.45941327865526116 1.0 ['ENSG00000105926|ENST00000222644|PALS2'] 81129 24943 PKGFVGLK True H1975_Epitope_Rep3 844.5170738047999 844.51596993586 103.76 2 -2.1298232038282037 0.4594141455131833 1.0 ['nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'USP9Y|p.W2351Cfs*39|1|0.47|ENSG00000114374|chrY:12847315-12847315|G/-|frameshift_variant', 'ENSG00000114374|ENST00000338981|USP9Y', 'USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 95527 19578 RWRLPLTCLLL True NCI_RA007_Epitope_Rep3 1382.82204666838 1382.8204049037902 85.396 3 -2.1298334518333784 0.4594141455131833 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 110488 7455 TFGGLGSL True PC9_epitope_Rep3 750.39120458534 750.39010993586 33.68 2 -2.129893015132706 0.4594199184126781 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 113959 20550 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 85.134 2 -2.130403139889611 0.45943723637140266 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 22255 22833 ETALLRFCL True NCI_RA007_Epitope_Rep5 1064.5688516774799 1064.56774993586 95.04 2 -2.130497878948569 0.45943723637140266 1.0 ['ENST00000436010.6_1_3:79067865-79067970:-|nuORF'] 92141 5006 RLEDMLLYCSY True PC9_epitope_Rep5 1404.6417589175599 1404.6406699358602 24.288 2 -2.1305035960948113 0.45943723637140266 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1'] 80509 7003 PGPAGAPS True PC9_epitope_Rep4 652.31803964508 652.3174949679301 34.185 1 -2.130565317245951 0.4594430087777374 1.0 ['ENST00000393760.5_1_10:99205993-99206050:+|nuORF', 'ENSG00000135925|ENST00000258411|WNT10A'] 110735 13458 TGGGGGGD True H1975_Epitope_Rep1 576.21396849936 576.2134249679301 56.882 1 -2.130714322800519 0.4594487810607921 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 113968 23584 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 97.205 2 -2.1309684111043214 0.459465231505211 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 122972 22255 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 98.563 2 -2.1312234522168567 0.45947186896028874 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 93407 22757 RQEGKKHILV True PC9_epitope_Rep4 1206.71968977482 1206.71858993586 95.754 2 -2.1312891271116627 0.45947186896028874 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'ENST00000489804.5_1_2:220415549-220417393:-|nuORF', 'ENST00000465149.1_1_2:220416245-220417504:-|nuORF'] 33253 5948 GKGPGGGP True H1975_Epitope_Rep3 625.3183739982501 625.31782496793 27.89 1 -2.131343194756065 0.45947186896028874 1.0 ['ENST00000536889.1_1_X:102565527-102565842:-|nuORF'] 52573 18973 KLHSQLRTTVL True NCI_RA007_Epitope_Rep3 1294.7721192705 1294.77046490379 82.915 3 -2.1316047757733125 0.4594785059901339 1.0 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 30690 10213 GALEKHVK True H1975_Epitope_Rep3 880.5130510535199 880.51250496793 44.331 1 -2.131656615453587 0.4594785059901339 1.0 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 105651 14688 SSEELCPTSGL True H1975_Epitope_Rep2 1121.4910548492498 1121.48994993586 61.658 2 -2.131841456342872 0.4594785059901339 1.0 ['FBXO4|p.A207S|1|0.35|ENSG00000151876|chr5:41929890-41929890|G/T|missense_variant'] 113962 21422 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 88.636 2 -2.1325300566220045 0.4595434355513795 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 113966 22919 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 94.604 2 -2.132602197558346 0.4595434355513795 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 34297 20459 GPAHTHPE True H1975_Epitope_Rep2 844.3827651599601 844.38166993586 84.759 2 -2.132778586083865 0.45955179740132174 1.0 ['CNGA4|p.V128Gfs*67|1|0.08|ENSG00000132259|chr11:6240176-6240189|GTCTACGTGCGGCT/-|frameshift_variant'] 110828 22405 TGPHCPLP True PC9_epitope_Rep6 820.39015903952 820.38906993586 99.162 2 -2.132861990202573 0.45955179740132174 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 108056 22218 SYAFHTPD True H1975_Epitope_Rep2 936.39774651776 936.39664993586 91.818 2 -2.132879458969696 0.45955179740132174 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000416281.6_1_11:67048455-67049666:+|nuORF'] 127340 8533 VMMDWRGKMLE True NCI_RA007_Epitope_Rep1 1394.6508841326201 1394.64978993586 37.192 2 -2.1328844715687616 0.45955179740132174 1.0 ['DDC|p.L122R|1|0.49|ENSG00000132437|chr7:50537930-50537930|A/C|missense_variant'] 3659 10570 AGPVGPMP True H1975_Epitope_Rep3 724.35779628208 724.35724496793 45.726 1 -2.1328878460310445 0.45955179740132174 1.0 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF'] 54230 27097 KWDQLYYFK True H1975_Epitope_Rep3 1289.6444591458896 1289.64280490379 113.55 3 -2.133157930297811 0.45955179740132174 1.0 ['ARHGAP24|p.G45W|1|0.39|ENSG00000138639|chr4:85570674-85570674|G/T|missense_variant'] 136789 13445 WYWRRTLGMQV True NCI_RA007_Epitope_Rep1 1494.75542366054 1494.7543299358601 56.302 2 -2.133199689025338 0.45955179740132174 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 113963 21535 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 89.095 2 -2.133504476926967 0.4595797834860035 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 91596 21389 RILHVRNAPS True H1975_Epitope_Rep3 1161.67307393557 1161.67141490379 89.374 3 -2.1336757313686214 0.4595797834860035 1.0 ['ENSG00000087299|ENST00000267436|L2HGDH'] 54016 23642 KVGPGNHG True PC9_epitope_Rep6 764.39293592084 764.39182993586 104.09 2 -2.1337086296842966 0.4595797834860035 1.0 ['ENSG00000008952|ENST00000337002|SEC62'] 79775 18067 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 76.293 2 -2.133772697583519 0.4595806465388393 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 32674 24458 GGQDGGRF True NCI_RA007_Epitope_Rep5 792.3514650316799 792.35036993586 101.55 2 -2.1338732608556246 0.4595806465388393 1.0 ['ENST00000306480.10_2_4:166024219-166034007:-|nuORF'] 122908 23907 VGHRAAVN True PC9_epitope_Rep2 822.4460341228599 822.44548496793 97.436 1 -2.134073593301946 0.45959709188739073 1.0 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11', 'nc|ENSG00000166167|Q9Y297-2|BTRC', 'ENSG00000166167|ENST00000370187|BTRC'] 53169 17866 KQCKNNLKLLR True NCI_RA007_Epitope_Rep2 1356.8023738529598 1356.80126993586 74.234 2 -2.134269010609373 0.45959795454302826 1.0 ['nc|ENSG00000163681|Q14BN4-5|SLMAP', 'nc|ENSG00000163681|Q14BN4-4|SLMAP', 'nc|ENSG00000163681|Q14BN4-2|SLMAP', 'nc|ENSG00000163681|Q14BN4-3|SLMAP', 'nc|ENSG00000163681|Q14BN4|SLMAP', 'ENSG00000163681|ENST00000671191|SLMAP'] 138871 4952 YKDSREES True PC9_epitope_Rep5 1012.4461532621599 1012.44504993586 24.084 2 -2.1343178321481044 0.45959795454302826 1.0 ['ENSG00000105559|ENST00000263265|PLEKHA4', 'nc|ENSG00000105559|Q9H4M7-2|PLEKHA4'] 32779 20104 GHFCLCPL True NCI_RA007_Epitope_Rep3 888.39861554824 888.39750993586 87.604 2 -2.1345260883124366 0.45960458611781285 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 126259 24135 VLHGGSPC True PC9_epitope_Rep3 768.35885891124 768.35776993586 98.119 2 -2.134541095303134 0.45960458611781285 1.0 ['ENST00000569796.1_1_16:2281646-2281928:+|nuORF'] 122923 21320 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 89.074 2 -2.134649405091411 0.45960458611781285 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 46798 20695 ITGLMPPGKL True PC9_epitope_Rep6 1025.5943381493298 1025.59324993586 92.367 2 -2.1347319111974703 0.4596103549506272 1.0 ['nc|ENSG00000205683|Q92784-3|DPF3'] 61747 21989 LLAFAKNL True NCI_RA007_Epitope_Rep4 888.54328855264 888.54218993586 95.353 2 -2.1350745326304326 0.4596161236602758 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 128255 23073 VPPEGLMC True H1975_Epitope_Rep1 844.38229677776 844.38118993586 95.949 2 -2.1352144833309223 0.4596218922467628 1.0 ['ENST00000483208.5_2_15:42694887-42695976:+|nuORF'] 15378 9936 EAHESLTR True PC9_epitope_Rep2 941.4566583762099 941.45556993586 43.549 2 -2.1352549696814527 0.459622754299256 1.0 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 73619 23047 MWIVKLRN True PC9_epitope_Rep4 1058.6059058925398 1058.6048099358602 96.872 2 -2.1353216749549313 0.459622754299256 1.0 ['ENST00000351223.7_1_1:46049867-46067967:+|nuORF'] 81461 21138 PLFTELKFY True PC9_epitope_Rep6 1156.6168474157198 1156.61574993586 94.154 2 -2.135481297216886 0.4596342908380568 1.0 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 60626 24428 LHIMLWEILR True PC9_epitope_Rep4 1322.75329840222 1322.75220993586 102.45 2 -2.1356691262498906 0.4596342908380568 1.0 ['APOBEC3G|p.G190W|1|0.29|ENSG00000239713|chr22:39081572-39081572|G/T|missense_variant'] 32516 12016 GGFDRGVP True H1975_Epitope_Rep3 803.3926015676699 803.3920549679301 51.38 1 -2.135893791842966 0.45966140774108155 1.0 ['ENST00000438684.1_1_2:234774587-234774704:-|nuORF'] 83460 19634 PTPPGFLG True H1975_Epitope_Rep1 784.41194002992 784.41084993586 81.734 2 -2.136087590233354 0.45967294308526535 1.0 ['RAPGEF6|p.Y1511F|1|0.13|ENSG00000158987|chr5:131429150-131429150|T/A|missense_variant'] 129635 12598 VRPGNGGK True NCI_RA007_Epitope_Rep3 783.4351350859899 783.4340299358599 56.799 2 -2.136094636922911 0.45967294308526535 1.0 ['ENST00000300403.10_1_20:30327209-30327416:+|nuORF'] 13588 19811 DPFCCEVI True NCI_RA007_Epitope_Rep5 924.3721260168799 924.37102993586 83.113 2 -2.13623951883981 0.4596893846400171 1.0 ['ENSG00000120211|ENST00000239316|INSL4'] 55216 6386 LADDHLIEV True NCI_RA007_Epitope_Rep2 1023.52367530687 1023.5225699358599 29.448 2 -2.1364596658706945 0.4597009190175798 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 10422 24452 CHKKNQSI True PC9_epitope_Rep1 956.48618468268 956.48508993586 98.898 2 -2.1365861195346807 0.4597009190175798 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 113977 23690 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 98.459 2 -2.137055690255028 0.4597124529026887 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 83839 23801 PVLVIVLVVLW True NCI_RA007_Epitope_Rep3 1248.8209669558798 1248.8193149037902 103.15 3 -2.137153128537145 0.4597124529026887 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15', 'ENST00000482827.1_1_X:74722059-74742841:-|nuORF'] 61749 25411 LLAFAKNL True PC9_epitope_Rep3 888.54328855264 888.54218993586 103.18 2 -2.137212117799905 0.45972889315828797 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 68762 28742 LTLEMHLFTW True PC9_epitope_Rep1 1289.64783027417 1289.64619490379 119.38 3 -2.137804055595505 0.45974042607693294 1.0 ['ENST00000394434.6_1_5:145524232-145529192:-|nuORF'] 48613 27751 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 115.31 3 -2.1378726517950493 0.45974042607693294 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 135673 25280 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 106.57 3 -2.1380220334732782 0.45974128546118215 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 25225 7901 FDFKTGQIDRR True NCI_RA007_Epitope_Rep3 1381.7102472899298 1381.70914993586 38.191 2 -2.1380575164074864 0.45974128546118215 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF'] 122937 20207 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 88.045 2 -2.138630519017467 0.45976520811099253 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 27695 22983 FPLAWTVLLLP True PC9_epitope_Rep4 1268.75328131888 1268.75218993586 96.624 2 -2.138661415135951 0.45976520811099253 1.0 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155106165-155106540:+|nuORF'] 49886 25279 KIGFHLSHKV True PC9_epitope_Rep2 1164.67676233368 1164.67566993586 102.91 2 -2.138670617885565 0.45976520811099253 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3', 'SLC9A3|p.G138Afs*82|1|0.38|ENSG00000066230|chr5:491870-491870|C/-|frameshift_variant'] 48626 25160 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 104.66 3 -2.138852215664476 0.45976520811099253 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 123327 21682 VGLRGHAAA True PC9_epitope_Rep5 850.47733425114 850.47622993586 88.447 2 -2.138873482193286 0.45976520811099253 1.0 ['ENST00000478796.5_1_1:45798697-45798943:-|nuORF'] 22471 20799 ETFDELHIE True H1975_Epitope_Rep2 1131.5084191655499 1131.50677490379 86.124 3 -2.1391351417936812 0.45976520811099253 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5', 'NCKAP5|p.Q769Efs*20|1|0.07|ENSG00000176771|chr2:132784506-132784507|-/GGAAACTCTC|frameshift_variant'] 110287 21342 TESHQKST True NCI_RA007_Epitope_Rep5 916.42502389476 916.42392993586 89.148 2 -2.1392770744024108 0.4597735494680227 1.0 ['CASS4|p.E701Rfs*47|1|0.11|ENSG00000087589|chr20:56458486-56458486|G/-|frameshift_variant', 'nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 49567 14348 KFQFKLLRM True NCI_RA007_Epitope_Rep3 1209.7056199338097 1209.7039649037902 63.751 3 -2.1395132403120374 0.4597735494680227 1.0 ['RHBDL3|p.C301F|1|0.14|ENSG00000141314|chr17:32316251-32316251|G/T|missense_variant'] 80525 9592 PGPHGPNG True PC9_epitope_Rep1 731.33508669155 731.33453496793 41.752 1 -2.139540272976159 0.4597735494680227 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 113961 21337 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 88.29 2 -2.139557893541986 0.4597735494680227 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 52918 22764 KPGKDIRNHI True PC9_epitope_Rep4 1176.6727395824 1176.6716499358602 95.779 2 -2.1397559275812106 0.4597735494680227 1.0 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 80142 25031 PFRFIFLKR True PC9_epitope_Rep3 1222.7338832869798 1222.7327899358602 101.63 2 -2.1397566118552986 0.4597735494680227 1.0 ['ENST00000527636.5_3_11:12696986-12785834:+|nuORF'] 126702 17719 VLPFMIVF True NCI_RA007_Epitope_Rep1 964.5455970517598 964.54448993586 73.06 2 -2.1397857949214907 0.4597735494680227 1.0 ['ENSG00000121318|ENST00000240619|TAS2R10'] 6954 22394 AQKKLKLVRT True NCI_RA007_Epitope_Rep3 1183.7764763749497 1183.77536993586 97.322 2 -2.139910804197342 0.45977440800776875 1.0 ['ENST00000484795.5_1_12:6761826-6762560:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-8|ING4', 'ENST00000488381.5_1_12:6760363-6764813:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-3|ING4', 'nc|ENSG00000111653|Q9UNL4-4|ING4', 'nc|ENSG00000111653|Q9UNL4-7|ING4', 'nc|ENSG00000111653|Q9UNL4-5|ING4', 'nc|ENSG00000111653|Q9UNL4-6|ING4', 'ENSG00000111653|ENST00000341550|ING4', 'nc|ENSG00000111653|Q9UNL4|ING4', 'ENST00000472002.5_1_12:6760363-6762075:-|nuORF'] 61547 18896 LKGWHKRFFV True NCI_RA007_Epitope_Rep3 1316.7505959802797 1316.74948993586 82.617 2 -2.140095795370828 0.45977440800776875 1.0 ['nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'OSBPL6|p.K117Sfs*18|1|0.18|ENSG00000079156|chr2:178331581-178331581|A/-|frameshift_variant'] 21821 9809 ESADLPPEGF True PC9_epitope_Rep1 1060.4713053808398 1060.4707749679299 42.593 1 -2.140633545888058 0.45979157111009183 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'nc|ENSG00000163491|Q6ZWH5-7|NEK10', 'ENST00000574215.5_1_3:27203940-27332977:-|nuORF', 'nc|ENSG00000163491|Q6ZWH5-6|NEK10', 'nc|ENSG00000163491|Q6ZWH5-5|NEK10'] 92605 21775 RMSLLHKH True NCI_RA007_Epitope_Rep5 1020.56510370972 1020.56400993586 90.879 2 -2.1407042893104387 0.45979157111009183 1.0 ['ENSG00000124216|ENST00000244050|SNAI1', 'ENSG00000019549|ENST00000020945|SNAI2'] 113960 21247 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 87.936 2 -2.140736345675974 0.45979157111009183 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 5858 22188 APFPHSGL True H1975_Epitope_Rep3 824.41808803952 824.41698993586 92.788 2 -2.1411911256520306 0.45979157111009183 1.0 ['ENSG00000205022|ENST00000419291|PABPN1L', 'nc|ENSG00000205022|A6NDY0-4|PABPN1L'] 44580 19249 ILPSGSSDVK True PC9_epitope_Rep1 1001.53932537101 1001.53822993586 78.841 2 -2.1412801287478516 0.45979157111009183 1.0 ['ENST00000451653.5_2_3:42589940-42590111:-|nuORF'] 32602 21198 GGHGRGAR True PC9_epitope_Rep1 766.3946672563399 766.39356993586 86.369 2 -2.1414374676886796 0.45979157111009183 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 5474 7057 ALVVVMAF True PC9_epitope_Rep2 848.4829967951999 848.48188993586 32.542 2 -2.1414821611076666 0.45979157111009183 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 28288 25154 FRPRDFYL True PC9_epitope_Rep1 1112.5767139392399 1112.57560993586 101.64 2 -2.1415811983129456 0.45979157111009183 1.0 ['ENSG00000139865|ENST00000553443|TTC6'] 23599 18135 EWEQALGG True NCI_RA007_Epitope_Rep3 888.3977465177597 888.39664993586 79.455 2 -2.141678657892379 0.45979157111009183 1.0 ['nc|ENSG00000288550|Q8NAC3-4|IL17RC', 'ENST00000483582.5_1_3:9958999-9974679:+|nuORF'] 140686 11295 YRVNYDKLGWK True H1975_Epitope_Rep3 1440.75138382592 1440.75028993586 48.552 2 -2.141865973786776 0.45979157111009183 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-3|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN', 'nc|ENSG00000172901|Q6Q4G3-4|LVRN'] 80253 22869 PGATKRAL True PC9_epitope_Rep5 812.4868363056798 812.48628496793 92.964 1 -2.142047116887833 0.45979157111009183 1.0 ['ENST00000330692.11_1_11:3384596-3392269:-|nuORF'] 122116 16560 VGAELPPSP True PC9_epitope_Rep2 865.4545331178899 865.4539849679301 68.936 1 -2.1420986819419645 0.45979157111009183 1.0 ['STAC|p.Q24L|1|0.37|ENSG00000144681|chr3:36380714-36380714|A/T|missense_variant'] 35201 16363 GRAGALRK True H1975_Epitope_Rep2 827.50896873259 827.50786993586 68.162 2 -2.142158129344612 0.45979157111009183 1.0 ['ENST00000538079.1_1_12:6887244-6887553:+|nuORF'] 138426 13442 YHILKPWWDVF True NCI_RA007_Epitope_Rep1 1502.77105664134 1502.76994993586 56.29 2 -2.142204959797806 0.45979157111009183 1.0 ['ENSG00000197147|ENST00000330947|LRRC8B'] 92195 22680 RLHELRVLTA True PC9_epitope_Rep4 1206.71968977482 1206.7180349037899 95.47 3 -2.1422448809535086 0.45979157111009183 1.0 ['ENSG00000161179|ENST00000292778|YDJC', 'ENST00000468686.5_1_22:21982709-21983718:-|nuORF'] 72200 20872 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 87.279 2 -2.1423396449261176 0.45979157111009183 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 126626 6656 VLNENNVPL True PC9_epitope_Rep4 1010.53965972418 1010.53856993586 32.774 2 -2.1424236962731737 0.45979157111009183 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 112475 24672 TLDKKLEH True PC9_epitope_Rep4 982.54474510462 982.54364993586 103.39 2 -2.1425779331717356 0.45979157111009183 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000586052.5_1_17:76423133-76435249:-|nuORF'] 81489 12203 PLGPGGWA True PC9_epitope_Rep4 753.38097425481 753.37986993586 54.758 2 -2.142853037187799 0.45979157111009183 1.0 ['ENST00000243776.10_1_2:220403697-220404108:-|nuORF'] 130375 23473 VSLAGARR True PC9_epitope_Rep1 828.49298431528 828.49188993586 95.075 2 -2.1429307137754248 0.45979157111009183 1.0 ['ENST00000596597.5_1_19:58757693-58758161:+|nuORF', 'ENST00000598880.5_1_19:58740873-58772232:+|nuORF'] 87075 25583 QNKKQRLL True PC9_epitope_Rep2 1026.62981214126 1026.6287099358601 104.09 2 -2.1429799866372337 0.45979157111009183 1.0 ['ENST00000568684.1_1_16:69958981-69959194:+|nuORF'] 61030 12684 LIEVDDERK True PC9_epitope_Rep1 1115.5822528121498 1115.58167496793 53.66 1 -2.143124365008721 0.45979157111009183 1.0 ['ENSG00000137154|ENST00000380394|RPS6'] 9008 14468 AVGRDRTT True NCI_RA007_Epitope_Rep2 874.46207810982 874.46152496793 60.939 1 -2.143453556224462 0.45979157111009183 1.0 ['AluSc8_dup3929|chr3:53237641-53237954:+|1.6830644660747616|0.4240188533349215|1.99|541.0|8|2|sense'] 59968 21881 LGHCGCGR True PC9_epitope_Rep1 801.33741227401 801.3368649679301 88.978 1 -2.1436623129436905 0.45979157111009183 1.0 ['ENST00000533173.1_1_8:145676645-145677062:-|nuORF'] 32469 24137 GGASKWPV True NCI_RA007_Epitope_Rep5 800.4180880395198 800.41698993586 100.25 2 -2.1436680484255994 0.45979157111009183 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 27248 6936 FLPPAPAA True NCI_RA007_Epitope_Rep4 782.4326754744999 782.43156993586 33.303 2 -2.1437848720159325 0.45979157111009183 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 57716 23928 LEELEEHRF True PC9_epitope_Rep2 1200.5775017848798 1200.57640993586 97.518 2 -2.14384382228086 0.45979157111009183 1.0 ['ENST00000460066.5_1_6:9769165-9933129:-|nuORF', 'nc|ENSG00000181355|Q8IZS5-3|OFCC1'] 94086 24476 RRLKKKKTTIK True H1975_Epitope_Rep3 1398.9510866919798 1398.94998993586 101.88 2 -2.1438658536729673 0.45979157111009183 1.0 ['SYT6|p.K488Sfs*12|1|0.38|ENSG00000134207|chr1:114097781-114097781|C/-|frameshift_variant', 'ENSG00000134207|ENST00000610222|SYT6', 'nc|ENSG00000134207|Q5T7P8-2|SYT6'] 62261 25775 LLFLFSQKELR True NCI_RA007_Epitope_Rep5 1392.8129214533199 1392.81182993586 106.69 2 -2.1438848642891273 0.45979157111009183 1.0 ['ENST00000370112.8_1_1:101376674-101377677:+|nuORF'] 130182 9195 VSEGWPTLSV True NCI_RA007_Epitope_Rep1 1073.53932537101 1073.53822993586 39.768 2 -2.1439463609430094 0.45979157111009183 1.0 ['ENST00000333235.3_1_Y:27624438-27626982:+|nuORF'] 127948 15461 VPHALTSS True NCI_RA007_Epitope_Rep5 810.4235673427801 810.42246993586 66.167 2 -2.1440439963899873 0.45979157111009183 1.0 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'ENST00000470191.5_1_9:15845666-15971831:+|nuORF'] 139380 24971 YLMLFNKL True PC9_epitope_Rep1 1040.5728744287599 1040.5717699358602 100.97 2 -2.144093989500193 0.45979157111009183 1.0 ['ENST00000604105.1_1_15:21135288-21138168:-|nuORF'] 116212 12737 TTAKTSKLR True NCI_RA007_Epitope_Rep4 1004.5978433066399 1004.59674993586 56.052 2 -2.1441370084485563 0.45979157111009183 1.0 ['ENSG00000204843|ENST00000628224|DCTN1'] 119700 25291 VAVQAIKL True H1975_Epitope_Rep2 840.5432885526399 840.54274496793 103.88 1 -2.144149176453094 0.45979157111009183 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.K664Nfs*28|1|0.35|ENSG00000101972|chrX:124064016-124064016|A/-|frameshift_variant'] 20441 20122 EPGIAGFKGE True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 85.534 2 -2.144152325478156 0.45979157111009183 1.0 ['ENSG00000139219|ENST00000380518|COL2A1', 'nc|ENSG00000139219|P02458-1|COL2A1', 'ENST00000493991.5_1_12:48375847-48382223:-|nuORF'] 34299 21961 GPAHTHPE True PC9_epitope_Rep6 844.3827651599601 844.38166993586 97.393 2 -2.1442188478789674 0.45979157111009183 1.0 ['CNGA4|p.V128Gfs*67|1|0.08|ENSG00000132259|chr11:6240176-6240189|GTCTACGTGCGGCT/-|frameshift_variant'] 72404 19655 MKKYLQFVAA True PC9_epitope_Rep5 1197.65800103505 1197.65690993586 80.66 2 -2.1443885497332076 0.45979157111009183 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant', 'TRRAP|p.L291*|1|0.11|ENSG00000196367|chr7:98900691-98900691|T/-|frameshift_variant'] 5932 22943 APGSARVEPHS True PC9_epitope_Rep4 1106.54687036294 1106.54627496793 96.47 1 -2.1444601968522137 0.45979157111009183 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 135900 24507 WPPSPPHR True H1975_Epitope_Rep2 972.49298431528 972.49188993586 100.82 2 -2.144496639877762 0.45979157111009183 1.0 ['ENST00000297954.8_1_9:96070838-96080353:+|nuORF'] 119779 3460 VCDSNTCHNGG True PC9_epitope_Rep2 1105.39169224449 1105.3905899358601 18.588 2 -2.1445440128857074 0.45979157111009183 1.0 ['ENSG00000143126|ENST00000271332|CELSR2'] 139558 6619 YLTVENKS True PC9_epitope_Rep6 952.48656152216 952.48546993586 34.174 2 -2.145294039956334 0.45983004403501476 1.0 ['nc|ENSG00000186007|Q68G75-3|LEMD1', 'ENSG00000186007|ENST00000367153|LEMD1'] 139340 22037 YLLLCFFS True NCI_RA007_Epitope_Rep3 1004.5041261626001 1004.50302993586 95.74 2 -2.145523236855613 0.45983004403501476 1.0 ['ENST00000584437.5_1_17:56494644-56494767:-|nuORF', 'ENST00000580014.1_1_17:56494486-56494767:-|nuORF'] 70556 21440 LWALGFIF True PC9_epitope_Rep6 965.5374748962099 965.53636993586 95.343 2 -2.145580080160325 0.45983004403501476 1.0 ['ENSG00000198804|ENST00000361624|MT-CO1'] 104658 16502 SQTHLKRL True NCI_RA007_Epitope_Rep3 981.57196291197 981.57086993586 72.709 2 -2.1455911312245437 0.45983004403501476 1.0 ['ENST00000501122.2_1_11:65197707-65198040:+|nuORF'] 48762 9075 KDKLNTQSTY True PC9_epitope_Rep2 1196.60371653272 1196.60260993586 40.251 2 -2.1456744267646215 0.45983004403501476 1.0 ['ENSG00000099250|ENST00000374867|NRP1'] 110827 21361 TGPHCPLP True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 89.225 2 -2.1456749440093694 0.45983004403501476 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 43007 7383 IETELTEEELD True NCI_RA007_Epitope_Rep3 1319.59802201559 1319.59692993586 36.167 2 -2.145865873792568 0.45983004403501476 1.0 ['nc|ENSG00000091137|O43511-2|SLC26A4', 'ENSG00000091137|ENST00000644269|SLC26A4'] 56213 23926 LCFPRGVA True PC9_epitope_Rep2 861.4530936492499 861.45198993586 97.51 2 -2.1458681068810774 0.45983004403501476 1.0 ['ENST00000525619.5_1_8:144772228-144772294:+|nuORF', 'ENST00000526970.5_1_8:144767209-144773249:+|nuORF', 'ENST00000533031.5_1_8:144766681-144773252:+|nuORF'] 32500 12626 GGEGQAWGP True H1975_Epitope_Rep3 857.3667807426498 857.36568993586 53.77 2 -2.146253970362606 0.45983004403501476 1.0 ['ENST00000572285.5_1_17:7133284-7137536:-|nuORF'] 113967 23388 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 96.427 2 -2.1463477281489842 0.45983004403501476 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 49155 20304 KELELCYR True NCI_RA007_Epitope_Rep2 1052.5324661687598 1052.53136993586 84.008 2 -2.1466645202980796 0.45983004403501476 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1'] 40007 22339 HPPSVKKA True NCI_RA007_Epitope_Rep3 862.50248636982 862.50138993586 97.085 2 -2.1466974631814026 0.45983004403501476 1.0 ['ENST00000459803.5_1_3:75472114-75480048:-|nuORF', 'ENST00000484945.5_1_3:75472114-75480048:-|nuORF', 'ENST00000491583.1_1_3:75475769-75480048:-|nuORF'] 965 13793 ADSYRTRGESP True PC9_epitope_Rep2 1237.5687280063298 1237.5676299358602 58.339 2 -2.1469075090597984 0.45983004403501476 1.0 ['ENST00000445946.3_1_10:89621729-89621954:-|nuORF'] 64355 23969 LPLKAWPGP True NCI_RA007_Epitope_Rep2 977.5698376536499 977.56928496793 100.61 1 -2.1469552103536405 0.45983004403501476 1.0 ['ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 136240 24699 WRVTLAVCVPA True PC9_epitope_Rep2 1213.66414904465 1213.66304993586 100.68 2 -2.1470261231823726 0.45983004403501476 1.0 ['ENST00000446716.5_1_2:220084153-220084420:-|nuORF'] 122942 20937 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 90.731 2 -2.1472871216245113 0.45983004403501476 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 127700 15442 VPAGLPLN True PC9_epitope_Rep5 779.4541391950701 779.45304993586 64.407 2 -2.147332317973972 0.45983004403501476 1.0 ['ENSG00000062096|ENST00000381127|ARSF', 'ARSF|p.P504Lfs*16|1|0.24|ENSG00000062096|chrX:3112289-3112289|C/-|frameshift_variant'] 92634 22774 RNFRNSLLK True PC9_epitope_Rep6 1146.6621748987 1146.66106993586 100.69 2 -2.1475413611405956 0.45983004403501476 1.0 ['ENST00000538582.5_1_12:21602605-21605051:+|nuORF'] 139461 6617 YLQPGTSN True H1975_Epitope_Rep3 878.4133965819001 878.41284496793 30.404 1 -2.1477059460090167 0.45983004403501476 1.0 ['ENSG00000234828|ENST00000636793|IQCM'] 32281 23342 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 97.073 2 -2.1477979220137065 0.45983004403501476 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 61532 19937 LKFKSIKET True NCI_RA007_Epitope_Rep5 1092.6542955536 1092.6531899358602 83.603 2 -2.1479156844131686 0.45983004403501476 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 122925 21519 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 89.926 2 -2.147920040306661 0.45983004403501476 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 113979 24066 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 99.968 2 -2.1481554193529617 0.45983004403501476 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 132421 15563 VVANVPLG True NCI_RA007_Epitope_Rep3 767.45413919507 767.45304993586 68.781 2 -2.148215054360658 0.45983004403501476 1.0 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3'] 110496 23531 TFGIGSMY True H1975_Epitope_Rep1 874.38949033318 874.38838993586 97.758 2 -2.148226578815786 0.45983004403501476 1.0 ['ENST00000475374.5_1_X:78207773-78207827:+|nuORF'] 79765 22407 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 92.601 2 -2.1486063486929923 0.45983004403501476 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 116214 22300 TTAMTSTP True H1975_Epitope_Rep2 808.36366950816 808.36256993586 92.159 2 -2.148639813114958 0.45983004403501476 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 75713 18221 NLKKLKRTWMP True NCI_RA007_Epitope_Rep4 1413.82786032481 1413.82676993586 78.837 2 -2.148686988543357 0.45983004403501476 1.0 ['ENST00000507606.2_1_7:135347283-135358947:+|nuORF'] 45537 5243 IQRELEERRQQ True H1975_Epitope_Rep3 1483.7855374885098 1483.78390490379 25.252 3 -2.1487065130323235 0.45983004403501476 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.G380Wfs*55|1|0.06|ENSG00000196652|chr7:99526176-99526177|-/T|frameshift_variant'] 97049 11975 SDAPLEEARQF True H1975_Epitope_Rep3 1261.5938801250097 1261.59278993586 51.221 2 -2.1487649539402414 0.45983004403501476 1.0 ['ENSG00000144224|ENST00000272638|UBXN4'] 104342 19384 SQISAKEQIIL True NCI_RA007_Epitope_Rep5 1228.7027022979998 1228.70160993586 81.447 2 -2.1488501942468514 0.45983004403501476 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 132616 23859 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 98.284 2 -2.1489737928945627 0.45983004403501476 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 103064 24526 SPGLIKKF True NCI_RA007_Epitope_Rep2 888.54328855264 888.54274496793 103.03 1 -2.149059337494644 0.45983004403501476 1.0 ['nc|ENSG00000187741|O15360-3|FANCA', 'ENSG00000187741|ENST00000389301|FANCA'] 15941 20448 EDLYPPTAGP True PC9_epitope_Rep4 1058.49204082542 1058.49094993586 86.798 2 -2.149086494012266 0.45983004403501476 1.0 ['ENSG00000102879|ENST00000219150|CORO1A', 'ENST00000567034.5_1_16:30199450-30200005:+|nuORF'] 61564 23591 LKIVHILNMT True PC9_epitope_Rep4 1180.7002002002 1180.6991099358602 99.05 2 -2.149112219144405 0.45983004403501476 1.0 ['ENSG00000213341|ENST00000370397|CHUK'] 122940 22913 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 99.591 2 -2.14950761707468 0.45983004403501476 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 82547 10792 PPSRAHLP True H1975_Epitope_Rep2 873.48208527841 873.48098993586 46.539 2 -2.1495978135148657 0.45983004403501476 1.0 ['ENSG00000014164|ENST00000262577|ZC3H3'] 81350 22025 PLCFFPVV True H1975_Epitope_Rep3 920.4829967951998 920.48188993586 92.099 2 -2.149808644901889 0.45983004403501476 1.0 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000513508.1_1_17:47781399-47782716:-|nuORF'] 82322 22206 PPIMLIGH True PC9_epitope_Rep2 876.4891448047999 876.48804993586 90.899 2 -2.149874767422074 0.45983004403501476 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 22002 13164 ESHGCPEV True NCI_RA007_Epitope_Rep5 856.33851738948 856.33742993586 57.313 2 -2.149884068217633 0.45983004403501476 1.0 ['ENST00000517353.5_1_8:82627029-82645114:-|nuORF', 'ENST00000519820.5_1_8:82626874-82633516:-|nuORF', 'nc|ENSG00000104231|Q8TCF1-4|ZFAND1', 'nc|ENSG00000104231|Q8TCF1-3|ZFAND1', 'ENSG00000104231|ENST00000220669|ZFAND1'] 24926 23503 FCKFLRQKRN True PC9_epitope_Rep2 1338.7342942931398 1338.73318993586 95.879 2 -2.1500661301297908 0.459867789743043 1.0 ['ENST00000500268.6_1_4:10455287-10455473:-|nuORF'] 69206 18864 LTSLRKLWLMH True NCI_RA007_Epitope_Rep1 1396.8013112238 1396.80020993586 77.521 2 -2.150138095709793 0.4598712126058125 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B'] 79202 17623 PAPFATSS True NCI_RA007_Epitope_Rep4 776.3704691407601 776.36936993586 76.242 2 -2.1501381119578857 0.4598712126058125 1.0 ['ENST00000274026.9_1_4:122744785-122745025:-|nuORF'] 129939 17950 VRVEKRGS True H1975_Epitope_Rep2 929.5406627836899 929.53956993586 74.366 2 -2.1507860574854796 0.4598712126058125 1.0 ['ENST00000570798.5_1_16:11678115-11678169:-|nuORF'] 130256 15089 VSGEFSRAL True PC9_epitope_Rep1 964.4977949121999 964.49668993586 62.858 2 -2.1510132412244407 0.4598712126058125 1.0 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENST00000543813.1_1_15:101717595-101728206:-|nuORF'] 64655 4164 LPVAVNEQT True PC9_epitope_Rep5 969.5131106231701 969.51200993586 21.09 2 -2.151353781228014 0.4598712126058125 1.0 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1'] 15476 4672 EALQRPVA True NCI_RA007_Epitope_Rep5 882.4923156089399 882.49120993586 24.654 2 -2.1514088780967726 0.4598712126058125 1.0 ['ABL1|p.L266Rfs*4|1|0.23|ENSG00000097007|chr9:130863009-130863010|-/GGACTCCT|frameshift_variant', 'ENSG00000097007|ENST00000318560|ABL1', 'nc|ENSG00000097007|P00519-2|ABL1'] 120288 14034 VEDLQFRVEE True NCI_RA007_Epitope_Rep2 1262.61428121642 1262.6131899358602 59.247 2 -2.1514530038079935 0.4598712126058125 1.0 ['CLIP1-KNTC1|1|fusion', 'nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 33310 15943 GKPKTTTT True NCI_RA007_Epitope_Rep4 832.46543215476 832.46432993586 69.195 2 -2.1514816289457066 0.4598712126058125 1.0 ['ENST00000352536.7_1_6:117593658-117593937:+|nuORF'] 64071 25668 LPATKRIRQ True PC9_epitope_Rep1 1081.6720113064098 1081.6709099358602 103.77 2 -2.1517002760267445 0.4598876320643077 1.0 ['ENST00000509378.1_1_4:165110937-165111516:+|nuORF'] 124687 24824 VGYPNVGK True PC9_epitope_Rep5 832.4443027873599 832.4437549679301 100.64 1 -2.1519302236780673 0.45988934255834035 1.0 ['ENSG00000041802|ENST00000265245|LSG1', 'ENST00000466391.1_1_3:194371468-194371945:-|nuORF'] 60488 24900 LHAAAAAA True PC9_epitope_Rep3 694.37622322754 694.3756749679301 101.15 1 -2.1519326894393194 0.45988934255834035 1.0 ['ENSG00000125816|ENST00000351817|NKX2-4', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 104567 19161 SQQKTKGPER True H1975_Epitope_Rep2 1157.6152842759298 1157.6141899358602 79.53 2 -2.152302168894176 0.45988934255834035 1.0 ['ENST00000424632.5_1_2:101888144-101889745:-|nuORF'] 122785 11395 VGGPGFGA True PC9_epitope_Rep1 660.32312502552 660.3225749679301 48.71 1 -2.1523398476431153 0.45988934255834035 1.0 ['ENST00000526623.2_1_11:64948241-64949272:-|nuORF'] 122928 22193 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 92.808 2 -2.1525147161520484 0.4598910529064995 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 115962 21111 TSICGSLE True H1975_Epitope_Rep2 808.36366950816 808.36256993586 87.381 2 -2.1525934228684647 0.4598910529064995 1.0 ['ENST00000430785.1_1_2:131176620-131176755:-|nuORF', 'ENST00000325390.7_1_2:130785042-130785990:-|nuORF'] 63036 7271 LLQAGTPH True H1975_Epitope_Rep3 835.45520182423 835.45410993586 32.942 2 -2.1529481016311065 0.4598910529064995 1.0 ['nc|ENSG00000183853|Q96J84-2|KIRREL1', 'ENSG00000183853|ENST00000359209|KIRREL1'] 81623 11316 PLLGHDAV True PC9_epitope_Rep2 820.4443027873599 820.44320993586 48.85 2 -2.153018971512471 0.4598910529064995 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 103912 25037 SQAKVIYG True PC9_epitope_Rep3 864.4705175351999 864.46942993586 101.65 2 -2.1532465226304436 0.4598968105065666 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 120552 13471 VEGEHERRLD True PC9_epitope_Rep2 1238.6003624877799 1238.59926993586 57.096 2 -2.1533838400165664 0.4599025679838821 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164', 'ENSG00000110274|ENST00000278935|CEP164', 'ENST00000533223.1_1_11:117257895-117280842:+|nuORF'] 42189 14775 IDRGDYYLE True PC9_epitope_Rep6 1142.5244035828598 1142.52387496793 68.791 1 -2.153544694064668 0.45991983967935873 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000521046.1_1_8:52773369-52773723:-|nuORF'] 93225 5314 RPREALSTNEC True PC9_epitope_Rep5 1274.6037336160598 1274.60209490379 25.454 3 -2.153613395013878 0.45991983967935873 1.0 ['ENSG00000018510|ENST00000264167|AGPS'] 43380 22633 IGCKIVGLP True PC9_epitope_Rep1 898.5310096167799 898.52990993586 91.868 2 -2.15365899615939 0.45991983967935873 1.0 ['ENST00000420283.2_1_6:116573500-116573923:-|nuORF'] 139039 21064 YLALLGEW True PC9_epitope_Rep2 963.50656869075 963.5060249679301 86.479 1 -2.153841496891154 0.45993625616918765 1.0 ['SLIT2|p.W674L|1|0.15|ENSG00000145147|chr4:20541497-20541497|G/T|missense_variant'] 133091 7663 VVQDPFQKG True NCI_RA007_Epitope_Rep2 1016.5290950404798 1016.52798993586 34.433 2 -2.15420144295385 0.459952672309037 1.0 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-2|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-4|MTCL1'] 79642 14432 PDPGACPD True NCI_RA007_Epitope_Rep5 770.2905045679 770.28995496793 62.194 1 -2.1544470895423298 0.45995842882268295 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP'] 72202 21433 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 89.504 2 -2.1549402191013085 0.4599906211365477 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 113982 22595 TPAHHPPG True PC9_epitope_Rep6 812.3929359208399 812.39182993586 99.95 2 -2.155080620337155 0.4599906211365477 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 15638 12329 EASTVSKK True NCI_RA007_Epitope_Rep5 848.46034677432 848.45924993586 54.074 2 -2.1554305399859675 0.4599906211365477 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 84400 6288 QAARACFALLW True NCI_RA007_Epitope_Rep2 1248.6437479532399 1248.64210490379 29.065 3 -2.155512264167459 0.4599906211365477 1.0 ['ENSG00000142627|ENST00000358432|EPHA2', 'EPHA2|p.T614Ifs*5|1|0.12|ENSG00000142627|chr1:16133504-16133504|G/-|frameshift_variant', 'nc|ENSG00000142627|P29317-2|EPHA2', 'ENST00000461614.1_1_1:16475516-16482484:-|nuORF'] 41333 12284 HWAHRLFP True NCI_RA007_Epitope_Rep3 1062.55116789774 1062.5500699358602 55.484 2 -2.155724746654007 0.4599906211365477 1.0 ['ENSG00000075131|ENST00000261881|TIPIN'] 113972 21290 TPAHHPPG True NCI_RA007_Epitope_Rep3 812.3929359208399 812.39182993586 92.561 2 -2.155887871712468 0.4599906211365477 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 50086 14329 KKHAIGIY True H1975_Epitope_Rep2 928.5494365622399 928.54832993586 60.266 2 -2.155891073936066 0.4599906211365477 1.0 ['ENSG00000101134|ENST00000262593|DOK5'] 19790 10971 ELSIDGLLNR True NCI_RA007_Epitope_Rep1 1128.6138872936 1128.61278993586 46.668 2 -2.1560060379503416 0.4599906211365477 1.0 ['ENSG00000159086|ENST00000331923|PAXBP1', 'ENST00000497873.1_1_21:34107263-34123563:-|nuORF'] 11375 21540 DERAQKRQPIR True PC9_epitope_Rep4 1395.7694935015497 1395.7683899358601 91.032 2 -2.156153023095754 0.4599906211365477 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 113970 23276 TPAHHPPG True H1975_Epitope_Rep3 812.3929359208399 812.39182993586 97.177 2 -2.1561917656882077 0.4599906211365477 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 41786 11065 IARHYRVP True PC9_epitope_Rep2 1010.5773826455799 1010.57628993586 47.879 2 -2.1563466602569497 0.4599906211365477 1.0 ['ENSG00000183690|ENST00000420999|EFHC2', 'nc|ENSG00000183690|Q5JST6-2|EFHC2', 'ENST00000343571.3_1_X:44008043-44084947:-|nuORF'] 93590 17838 RQNQSNLK True NCI_RA007_Epitope_Rep2 986.52574099554 986.52464993586 74.126 2 -2.1563897240068832 0.4599906211365477 1.0 ['nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2', 'nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2'] 122967 20930 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 93.28 2 -2.1564394444039356 0.4599906211365477 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 3037 23928 AFQLGLRLGE True H1975_Epitope_Rep1 1102.6134933707797 1102.6123899358602 99.316 2 -2.156548970771088 0.46000788651938057 1.0 ['ENSG00000224940|ENST00000446477|PRRT4', 'nc|ENSG00000224940|C9JH25-3|PRRT4'] 26312 22154 FHMASFFS True H1975_Epitope_Rep2 972.4163737873599 972.41526993586 91.563 2 -2.156780274242773 0.46000788651938057 1.0 ['PPM1B-ABCG8|1|fusion', 'PPM1B-ABCG8|2|fusion', 'ABCG8|p.A565D|1|0.42|ENSG00000143921|chr2:43875351-43875351|C/A|missense_variant', 'nc|ENSG00000143921|Q9H221-2|ABCG8', 'ENSG00000143921|ENST00000272286|ABCG8'] 38623 23677 HFFRLSLPKKK True PC9_epitope_Rep2 1399.8452246411096 1399.84412993586 96.549 2 -2.157128853787404 0.46000788651938057 1.0 ['KIF13B|p.N543S|1|0.47|ENSG00000197892|chr8:29148762-29148762|T/C|missense_variant'] 2670 24350 AESPGTNSLLP True H1975_Epitope_Rep3 1084.5400536470001 1084.53894993586 101.4 2 -2.1573507965514533 0.460013641401654 1.0 ['nc|ENSG00000157111|Q8WVE6-2|TMEM171', 'ENSG00000157111|ENST00000454765|TMEM171'] 37939 25788 HAAAPGGG True H1975_Epitope_Rep2 636.2979729068401 636.29742496793 105.89 1 -2.1576036667263905 0.4600300533927296 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 6426 4964 APRTQPDLIL True PC9_epitope_Rep1 1122.6397081186199 1122.63805490379 23.953 3 -2.157862123860863 0.4600498710598666 1.0 ['nc|ENSG00000171671|Q9BTD1|SHANK2-AS3'] 131704 20960 VTNRIDTTR True PC9_epitope_Rep6 1074.57817049122 1074.5770699358602 93.412 2 -2.157867907894813 0.4600498710598666 1.0 ['nc|ENSG00000178904|Q6ZPD9-2|DPY19L3', 'ENSG00000178904|ENST00000392250|DPY19L3'] 83459 19533 PTPPGFLG True H1975_Epitope_Rep1 784.41194002992 784.41084993586 81.335 2 -2.1579277635248904 0.4600498710598666 1.0 ['RAPGEF6|p.Y1511F|1|0.13|ENSG00000158987|chr5:131429150-131429150|T/A|missense_variant'] 135810 23377 WNGKLLKI True NCI_RA007_Epitope_Rep4 970.5963867546599 970.59528993586 101.49 2 -2.1580633337612025 0.4600498710598666 1.0 ['ENSG00000113369|ENST00000265138|ARRDC3'] 129683 17567 VRPLPWQMC True NCI_RA007_Epitope_Rep3 1128.55724144796 1128.55614993586 77.062 2 -2.158270957593123 0.4600498710598666 1.0 ['ENST00000316881.8_1_17:54966994-54967120:-|nuORF'] 123075 8134 VGKGHPFQ True NCI_RA007_Epitope_Rep3 868.4555361773998 868.45442993586 39.101 2 -2.1582906376319366 0.4600498710598666 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|37|2|sense'] 93594 22718 RQNWPEDKRRY True PC9_epitope_Rep3 1546.7753071579798 1546.7736749037902 92.652 3 -2.1583006018462556 0.4600498710598666 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 124956 24622 VHSTHAPT True PC9_epitope_Rep3 848.41406528824 848.41296993586 100.07 2 -2.1583446383266174 0.4600498710598666 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 72605 23435 MLTPLGKFS True PC9_epitope_Rep2 992.53648892004 992.5353899358599 95.614 2 -2.1583671942809257 0.4600498710598666 1.0 ['nc|ENSG00000162493|Q86YL7-4|PDPN', 'nc|ENSG00000162493|Q86YL7-3|PDPN'] 95532 22429 RWRLPLTCLLL True PC9_epitope_Rep6 1382.82204666838 1382.8204049037902 99.267 3 -2.1585163859125047 0.46007203444013467 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 3322 12736 AGGHWGPV True NCI_RA007_Epitope_Rep4 779.3714722002699 779.37092496793 56.048 1 -2.1587489675718268 0.46007203444013467 1.0 ['ENST00000452533.6_1_12:32832232-32832310:+|nuORF'] 26809 14949 FLAFLYAL True NCI_RA007_Epitope_Rep4 956.53714054304 956.53604993586 64.966 2 -2.1589222600717424 0.4600990995790932 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 141689 24340 YTTKKTKIL True H1975_Epitope_Rep3 1094.66994561774 1094.6688499358602 101.36 2 -2.1590315515961023 0.46010485263090595 1.0 ['ENST00000311117.7_1_7:104746436-104747131:+|nuORF'] 32559 16592 GGGKPQAA True NCI_RA007_Epitope_Rep1 684.3554877829599 684.35493496793 68.655 1 -2.159353643513904 0.460127863612147 1.0 ['nc|ENSG00000151233|Q4G148-2|GXYLT1', 'ENSG00000151233|ENST00000398675|GXYLT1'] 101370 15392 SLKAANAA True NCI_RA007_Epitope_Rep2 744.41300265908 744.4124549679301 64.571 1 -2.1593657598893348 0.460127863612147 1.0 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ABCF1|p.R331Afs*5|1|0.53|ENSG00000204574|chr6:30583682-30583682|C/-|frameshift_variant'] 113981 22514 TPAHHPPG True PC9_epitope_Rep6 812.3929359208399 812.39182993586 99.604 2 -2.1593890908567643 0.460127863612147 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 99062 17818 SHGFWLKRSSY True H1975_Epitope_Rep1 1366.6782188856598 1366.6771299358602 74.196 2 -2.1596874590232726 0.460127863612147 1.0 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF'] 34534 23811 GPRMAFFSI True H1975_Epitope_Rep1 1024.5164221817997 1024.51532993586 98.838 2 -2.1600992818096993 0.4601304125468803 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2'] 100305 25233 SKGLKGGGGG True PC9_epitope_Rep2 816.4453654165197 816.44481496793 102.73 1 -2.1601132085823633 0.4601304125468803 1.0 ['nc|ENSG00000143373|Q8N1G0-2|ZNF687', 'ENSG00000143373|ENST00000336715|ZNF687'] 33322 23349 GKPRLKIYL True PC9_epitope_Rep6 1086.6913497686598 1086.69024993586 102.92 2 -2.160185435050316 0.4601304125468803 1.0 ['ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 92418 7317 RLRAETEQG True NCI_RA007_Epitope_Rep1 1058.54687036294 1058.54576993586 32.454 2 -2.160383327178642 0.4601304125468803 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 80884 23285 PHVGGSGG True NCI_RA007_Epitope_Rep3 666.30853759054 666.3079849679301 101.14 1 -2.1603852439806484 0.4601304125468803 1.0 ['ENST00000371851.1_1_9:136857425-136857656:-|nuORF'] 94820 25579 RSRLNIYK True PC9_epitope_Rep2 1048.6141620771198 1048.61357496793 104.08 1 -2.1604325545186973 0.4601304125468803 1.0 ['ENSG00000072315|ENST00000262839|TRPC5', 'nc|ENSG00000133107|Q9UBN4-7|TRPC4', 'nc|ENSG00000133107|Q9UBN4-4|TRPC4', 'nc|ENSG00000133107|Q9UBN4-5|TRPC4', 'nc|ENSG00000133107|Q9UBN4-3|TRPC4', 'nc|ENSG00000133107|Q9UBN4-2|TRPC4', 'ENSG00000133107|ENST00000379705|TRPC4'] 92104 25098 RLAAAPPQ True NCI_RA007_Epitope_Rep5 822.47118624154 822.47008993586 104.04 2 -2.160890316482122 0.46018943712243093 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 39490 5963 HLDQYLYQL True NCI_RA007_Epitope_Rep2 1191.59242357303 1191.5913299358601 27.805 2 -2.161123230872227 0.46021649726182107 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF'] 34141 15318 GNCGKSKR True NCI_RA007_Epitope_Rep3 848.4286698065599 848.42756993586 67.812 2 -2.1611799653714723 0.46022224826601604 1.0 ['ENST00000476941.5_1_3:142524902-142525013:+|nuORF'] 36280 5042 GVDWLQDQI True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 24.763 2 -2.1614034335974472 0.4602559048826481 1.0 ['ENSG00000113966|ENST00000463745|ARL6'] 120564 13148 VEGLKKEL True NCI_RA007_Epitope_Rep2 914.54368247546 914.54258993586 55.775 2 -2.161471861769248 0.4602559048826481 1.0 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1', 'ENST00000502531.1_1_5:179023563-179032937:+|nuORF'] 35275 10633 GRFREMLRWFL True NCI_RA007_Epitope_Rep2 1509.8027082061296 1509.8016099358601 45.959 2 -2.1615202325714193 0.4602559048826481 1.0 ['nc|ENSG00000141867|O60885-3|BRD4'] 93576 5989 RQLWWYHWICW True H1975_Epitope_Rep1 1675.78705814199 1675.78540490379 28.107 3 -2.161520531213991 0.4602559048826481 1.0 ['SGMS1|p.R303Q|1|0.26|ENSG00000198964|chr10:50308136-50308136|C/T|missense_variant'] 88411 22968 QSNHHCHA True NCI_RA007_Epitope_Rep5 932.36713217916 932.36602993586 95.579 2 -2.1619209628005938 0.4602780589143983 1.0 ['nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 53588 25667 KRRKTSVF True PC9_epitope_Rep1 1020.6192474575599 1020.61814993586 103.76 2 -2.16212405580916 0.4602780589143983 1.0 ['ENST00000539976.1_1_16:89981432-89981549:+|nuORF'] 22654 24535 ETPPEAKKTE True PC9_epitope_Rep2 1128.5662683948399 1128.56461490379 99.993 3 -2.163028597650241 0.4602895586308287 1.0 ['ENSG00000182463|ENST00000371497|TSHZ2', 'nc|ENSG00000182463|Q9NRE2-2|TSHZ2'] 73875 23676 NATKTKLKQ True PC9_epitope_Rep2 1030.61349337078 1030.6123899358602 96.545 2 -2.1630925440811932 0.4602895586308287 1.0 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1'] 25268 12648 FDLLLAEW True H1975_Epitope_Rep1 1005.5171333744499 1005.51602993586 53.704 2 -2.1635775268426967 0.46029125075902033 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5'] 32570 7235 GGGREACH True NCI_RA007_Epitope_Rep1 785.3238703848499 785.32332496793 32.133 1 -2.1636237001152963 0.46029125075902033 1.0 ['ENST00000235307.6_1_1:184356254-184446568:+|nuORF'] 91080 7691 RFLYLQKEEYW True NCI_RA007_Epitope_Rep1 1573.79291428473 1573.79180993586 33.909 2 -2.1639242153688123 0.46029125075902033 1.0 ['ENST00000273047.8_1_3:19988696-19992457:+|nuORF'] 18934 3813 ELEFESER True PC9_epitope_Rep4 1037.4665543535698 1037.46544993586 20.833 2 -2.1639311188494936 0.46029125075902033 1.0 ['ENSG00000147100|ENST00000587091|SLC16A2'] 106674 21771 STTMRQVS True NCI_RA007_Epitope_Rep5 908.4385657839199 908.43746993586 90.862 2 -2.1645142905204944 0.4603683543359928 1.0 ['ENST00000539605.5_1_12:133331485-133331596:-|nuORF'] 131633 24969 VTLSYTYIIRT True PC9_epitope_Rep2 1328.7340024262799 1328.73290993586 101.71 2 -2.1647773239901515 0.4603683543359928 1.0 ['ENSG00000179626|ENST00000641569|OR6C4'] 9782 20268 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 88.301 2 -2.1647780240133727 0.4603683543359928 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 77707 24805 NTKTQKIRLL True NCI_RA007_Epitope_Rep5 1213.75065554993 1213.7495499358602 102.9 2 -2.16521110328408 0.4603683543359928 1.0 ['nc|ENSG00000114487|Q86VD1-2|MORC1', 'ENSG00000114487|ENST00000232603|MORC1'] 122922 16948 VGHSAGHP True H1975_Epitope_Rep2 760.36163579256 760.36052993586 70.435 2 -2.1652126550705892 0.4603683543359928 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 65656 23199 LSALWGMK True PC9_epitope_Rep1 904.48405942436 904.4835149679301 94.032 1 -2.1652323077382882 0.4603683543359928 1.0 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 133847 12654 VYGLHPLCFC True NCI_RA007_Epitope_Rep4 1150.53035799378 1150.52977496793 55.703 1 -2.1654324543306824 0.4603741025586399 1.0 ['ENSG00000197651|ENST00000358859|CCER1'] 41749 21541 IANQVAIQRKK True PC9_epitope_Rep6 1267.77245362367 1267.7713499358601 95.731 2 -2.165931800575793 0.4603798506588268 1.0 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.L492Pfs*21|1|0.16|ENSG00000100425|chr22:49804253-49804254|-/G|frameshift_variant'] 55288 16724 LADTVLKI True NCI_RA007_Epitope_Rep5 871.5378688190299 871.53676993586 71.092 2 -2.1661433681497595 0.4603855986365573 1.0 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant', 'ENST00000593906.1_1_19:40698163-40710439:+|nuORF'] 78819 26766 PAAYVKKL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 108.85 1 -2.166281688488006 0.4603921902793903 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.D1281Tfs*9|1|0.25|ENSG00000197694|chr9:128605153-128605153|G/-|frameshift_variant'] 139861 16630 YPPHPDYT True NCI_RA007_Epitope_Rep5 988.4290466460401 988.4279499358599 70.733 2 -2.1664004631134905 0.4603921902793903 1.0 ['ENSG00000130309|ENST00000252599|COLGALT1'] 16532 11287 EELNRRYH True H1975_Epitope_Rep1 1115.54720471611 1115.5461099358602 48.393 2 -2.166467725211453 0.4603921902793903 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 30536 12982 GAGPPNPA True H1975_Epitope_Rep1 679.32893868195 679.3283949679301 55.014 1 -2.166640421321637 0.46040943271627294 1.0 ['nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1'] 114906 17928 TQSNLLSV True NCI_RA007_Epitope_Rep4 860.46034677432 860.45924993586 77.58 2 -2.1668328156815373 0.46040943271627294 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'nc|ENSG00000177595|Q9HB75-4|PIDD1', 'ENST00000524486.5_1_11:799309-803120:-|nuORF', 'PIDD1|p.R798L|1|0.08|ENSG00000177595|chr11:799896-799896|C/A|missense_variant', 'ENST00000527357.5_1_11:799813-799969:-|nuORF'] 40907 24690 HSPPSTLV True H1975_Epitope_Rep2 836.4392174069201 836.43812993586 101.53 2 -2.166870181037993 0.46040943271627294 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 82105 22310 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 92.966 2 -2.1672255746065328 0.46041517995036585 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 113973 21386 TPAHHPPG True NCI_RA007_Epitope_Rep3 812.3929359208399 812.39182993586 92.946 2 -2.167341388783068 0.4604160231763039 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 110688 19339 TGDLSPGH True H1975_Epitope_Rep1 782.3558817057801 782.35533496793 80.563 1 -2.1674465416595288 0.4604160231763039 1.0 ['nc|ENSG00000171813|Q6NUJ5-2|PWWP2B', 'PWWP2B|p.G519Rfs*30|1|0.06|ENSG00000171813|chr10:132406055-132406056|GG/-|frameshift_variant', 'ENSG00000171813|ENST00000305233|PWWP2B'] 32283 23981 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 99.622 2 -2.1678394512471377 0.46043242091809566 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 30726 9971 GALHTPPI True H1975_Epitope_Rep1 804.4493881678 804.44828993586 43.29 2 -2.1681872411045173 0.4604701196067781 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 28160 11010 FRDLLHIGTQ True PC9_epitope_Rep6 1198.6458561282197 1198.64422490379 53.244 3 -2.168249248609842 0.4604758658884676 1.0 ['ENSG00000178814|ENST00000618853|OPLAH'] 96898 16998 SATVKVQG True NCI_RA007_Epitope_Rep4 788.4392174069199 788.43812993586 73.661 2 -2.1691293250994668 0.4605242137326531 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN'] 61361 17997 LISTDVWAR True PC9_epitope_Rep4 1059.57129420563 1059.57077496793 77.283 1 -2.1695092445192246 0.46052505458224613 1.0 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78110025-78110175:-|nuORF'] 135004 25009 WCSVRDNHL True NCI_RA007_Epitope_Rep3 1128.51346205968 1128.51181490379 108.11 3 -2.1696305537282043 0.46052505458224613 1.0 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2'] 122597 13201 VGFGLGFQ True PC9_epitope_Rep1 823.42283906679 823.42174993586 55.641 2 -2.1700977187878006 0.4605627502769021 1.0 ['ENST00000472636.5_1_5:56206045-56206902:+|nuORF'] 52623 23245 KLNLSLHKKT True PC9_epitope_Rep6 1180.72919182936 1180.72808993586 102.51 2 -2.1702095660814003 0.46056849526608945 1.0 ['ENSG00000141946|ENST00000269834|ZIM3'] 82107 22768 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 94.784 2 -2.1704540951733455 0.4605955398411042 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 6231 8471 APPPQGLRAS True PC9_epitope_Rep1 992.5403284305199 992.53922993586 37.419 2 -2.1707520229416994 0.4606012843587259 1.0 ['ENST00000494448.5_1_11:62379695-62379848:-|nuORF'] 54228 27040 KWDQLYYFK True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 112.88 3 -2.171432889463232 0.46060393108882214 1.0 ['ARHGAP24|p.G45W|1|0.39|ENSG00000138639|chr4:85570674-85570674|G/T|missense_variant'] 89756 14317 RAGFKAGG True PC9_epitope_Rep5 762.4136713654199 762.41256993586 60.072 2 -2.17150538511268 0.46060393108882214 1.0 ['ENSG00000066557|ENST00000370952|LRRC40'] 123534 5724 VGPPGPAR True NCI_RA007_Epitope_Rep3 749.41842239269 749.41732993586 29.491 2 -2.1716497024027737 0.46060393108882214 1.0 ['COL4A4|p.G867R|1|0.2|ENSG00000081052|chr2:227056062-227056062|C/G|missense_variant'] 131429 17381 VTIGFSLDRT True PC9_epitope_Rep6 1107.59242357303 1107.5913299358601 79.472 2 -2.171706991236727 0.46060393108882214 1.0 ['nc|ENSG00000148358|Q5VW38-3|GPR107', 'ENSG00000148358|ENST00000347136|GPR107', 'nc|ENSG00000148358|Q5VW38|GPR107'] 45731 10432 IRWASRWDYIL True H1975_Epitope_Rep1 1477.78301830737 1477.78192993586 45.081 2 -2.1718194790240366 0.46060393108882214 1.0 ['ENSG00000125304|ENST00000376387|TM9SF2'] 125552 22400 VKKAVPKEDI True PC9_epitope_Rep4 1125.6757592741699 1125.67411490379 94.396 3 -2.1718856854560964 0.46060393108882214 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 89313 6212 QWLDENEEV True NCI_RA007_Epitope_Rep1 1160.49858275784 1160.4974899358601 28.2 2 -2.172003624824881 0.46060393108882214 1.0 ['ENSG00000130477|ENST00000519716|UNC13A'] 128997 25775 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 104.54 2 -2.1721247368923278 0.46060393108882214 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 130181 8587 VSEGWPTLSV True H1975_Epitope_Rep3 1073.53932537101 1073.53822993586 38.021 2 -2.172454229691918 0.46060393108882214 1.0 ['ENST00000333235.3_1_Y:27624438-27626982:+|nuORF'] 138109 23926 YGGVGGPGAAG True PC9_epitope_Rep2 861.3980808709298 861.39698993586 97.51 2 -2.172712735766813 0.46060393108882214 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 72197 19032 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 80.062 2 -2.1727421623418204 0.46060393108882214 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 33801 9545 GLLLEYEAQ True PC9_epitope_Rep5 1034.52842633414 1034.52732993586 41.672 2 -2.1728241004273836 0.46060393108882214 1.0 ['ENSG00000176422|ENST00000338146|SPRYD4'] 70484 23340 LVVLPHIRP True NCI_RA007_Epitope_Rep4 1042.66513502082 1042.66402993586 101.34 2 -2.1729601223719603 0.46060393108882214 1.0 ['ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.D1165Tfs*39|1|0.3|ENSG00000120800|chr12:101333375-101333375|G/-|frameshift_variant'] 83594 7426 PVCFHLGLGLP True NCI_RA007_Epitope_Rep5 1151.6161362230698 1151.61557496793 35.242 1 -2.1729750061330106 0.46060393108882214 1.0 ['ENSG00000248483|ENST00000606183|POU5F2'] 142082 24220 YVLWKEILFL True PC9_epitope_Rep2 1322.7638460025798 1322.76274993586 98.701 2 -2.173117531399246 0.46060393108882214 1.0 ['ENSG00000125734|ENST00000264080|GPR108'] 18255 19936 EIQERLKRKL True NCI_RA007_Epitope_Rep5 1311.7986683715096 1311.79756993586 83.598 2 -2.1731729010862115 0.46060393108882214 1.0 ['TTC3|p.S1572Rfs*43|1|0.25|ENSG00000182670|chr21:37182869-37182878|ATCACTGAAG/-|frameshift_variant'] 36147 8153 GVAQKTWELAN True PC9_epitope_Rep5 1215.6247863304698 1215.62368993586 36.3 2 -2.173173709323186 0.46060393108882214 1.0 ['COPS5|p.M8V|1|0.21|ENSG00000121022|chr8:67061975-67061975|T/C|missense_variant'] 129685 23198 VRPPPRGA True H1975_Epitope_Rep3 848.4980696957199 848.49696993586 96.869 2 -2.173229247977657 0.46060393108882214 1.0 ['ENST00000373511.6_1_9:128200812-128200935:-|nuORF'] 80926 24710 PIDDAYMG True PC9_epitope_Rep1 880.36366950816 880.36256993586 99.935 2 -2.1732518562718623 0.46060393108882214 1.0 ['ENSG00000198488|ENST00000622824|B3GNT6', 'nc|ENSG00000198488|Q6ZMB0-3|B3GNT6'] 54015 25061 KVGPGNHG True H1975_Epitope_Rep1 764.39293592084 764.39182993586 103.78 2 -2.1733300992530395 0.46061051309078904 1.0 ['ENSG00000008952|ENST00000337002|SEC62'] 80526 9524 PGPHGPNG True PC9_epitope_Rep3 731.33508669155 731.33453496793 41.581 1 -2.1733511707363564 0.46061051309078904 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 102584 9799 SLWAWVERE True NCI_RA007_Epitope_Rep1 1174.5771078620598 1174.5760099358602 42.118 2 -2.1735126270117164 0.46061051309078904 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 135644 25200 WLLPGLREIKL True NCI_RA007_Epitope_Rep4 1336.8230922142 1336.82198993586 109.8 2 -2.1735797828409016 0.46061135185204904 1.0 ['ENST00000586784.1_1_19:28284417-28288693:+|nuORF', 'ENST00000588122.5_1_19:28284417-28284552:+|nuORF'] 32676 17517 GGRFGRKG True NCI_RA007_Epitope_Rep4 833.4620185401699 833.46092993586 75.827 2 -2.173585320367304 0.46061135185204904 1.0 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000581621.1_1_17:7481648-7481801:+|nuORF'] 122714 5394 VGGGTREL True PC9_epitope_Rep4 787.41881631551 787.41770993586 27.476 2 -2.1740334629445592 0.46062774157829733 1.0 ['ENST00000587406.5_1_19:19230741-19232328:-|nuORF'] 94867 24729 RSYKQKKK True PC9_epitope_Rep4 1064.6454622054 1064.6443699358601 103.62 2 -2.174109930832507 0.4606334841628959 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 3316 18879 AGGGHPNK True PC9_epitope_Rep4 736.36163579256 736.3610849679301 80.705 1 -2.1749477684209495 0.46064987330451634 1.0 ['ENST00000490362.1_1_2:217498183-217525611:+|nuORF'] 21544 5855 ERNHWHYRDLE True H1975_Epitope_Rep1 1553.71237254825 1553.71072490379 27.591 3 -2.175472791783855 0.46069903863556516 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 91302 23896 RGQPLLEV True NCI_RA007_Epitope_Rep4 910.5236157372199 910.52250993586 103.65 2 -2.1756300502829133 0.46069903863556516 1.0 ['nc|ENSG00000117407|Q5T4W7-2|ARTN'] 81258 24951 PKQKLKEE True NCI_RA007_Epitope_Rep5 998.5760452328999 998.57494993586 103.47 2 -2.1756701546033494 0.46069903863556516 1.0 ['nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'DNMT1|p.H1332Gfs*10|1|0.18|ENSG00000130816|chr19:10138496-10138512|CGGGGAGCAAACACGTG/-|frameshift_variant', 'DNMT1|p.E962Sfs*171|1|0.07|ENSG00000130816|chr19:10143950-10143950|C/-|frameshift_variant'] 52921 22960 KPGKMFVLR True PC9_epitope_Rep1 1074.6372060208198 1074.63610993586 93.118 2 -2.1759353640559946 0.46073671883317363 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 139647 2222 YMNFYKIPKS True PC9_epitope_Rep2 1289.64783027417 1289.64619490379 12.526 3 -2.17618194809433 0.4607539416392535 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1', 'nc|ENSG00000070729|Q14028-2|CNGB1'] 106073 9172 STALEPTSQK True H1975_Epitope_Rep1 1060.540053647 1060.53894993586 40.185 2 -2.1763144948693127 0.4607539416392535 1.0 ['ENST00000589986.2_1_19:38794923-38795601:+|nuORF'] 37938 25572 HAAAPGGG True H1975_Epitope_Rep1 636.2979729068401 636.29742496793 106.0 1 -2.1764826470623886 0.4607539416392535 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 20299 14078 ENTISPYEM True H1975_Epitope_Rep3 1082.45902644498 1082.45847496793 59.477 1 -2.176621884273248 0.4607596823301467 1.0 ['ENSG00000092148|ENST00000399332|HECTD1'] 114164 14154 TPKPVEPA True PC9_epitope_Rep4 837.4596184983299 837.45852993586 62.345 2 -2.176924204100189 0.46078180889115994 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1'] 113418 16975 TLSFVEKHC True PC9_epitope_Rep4 1062.51681610462 1062.51570993586 73.284 2 -2.1769411486593517 0.46078180889115994 1.0 ['ENST00000429519.5_1_4:74980082-74980279:+|nuORF'] 48641 26275 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 107.21 3 -2.1771079429900566 0.46078754910205777 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 110567 18006 TFRALLLHR True H1975_Epitope_Rep2 1125.6770966868498 1125.67546490379 74.591 3 -2.1771429331394283 0.4607883839512875 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 53550 18394 KRPGKLTST True NCI_RA007_Epitope_Rep2 986.58727862294 986.58618993586 76.311 2 -2.1771621939630474 0.4607883839512875 1.0 ['nc|ENSG00000111877|Q9NXL9-4|MCM9', 'ENSG00000111877|ENST00000619706|MCM9'] 87707 22994 QRACPSSP True NCI_RA007_Epitope_Rep5 844.38613628824 844.38502993586 95.681 2 -2.1773443321127153 0.4608047690014903 1.0 ['nc|ENSG00000167702|Q96AC6|KIFC2'] 114055 24489 TPELKNTA True NCI_RA007_Epitope_Rep3 872.46034677432 872.45924993586 105.96 2 -2.1778227077279992 0.46083179868215157 1.0 ['ENST00000512287.1_1_5:80531725-80531761:-|nuORF'] 48383 9954 IYTSEPSAQ True PC9_epitope_Rep2 994.46074069714 994.4596499358599 43.619 2 -2.177923790896529 0.46084494448997837 1.0 ['ENST00000366472.5_1_1:249120450-249120786:-|nuORF'] 22472 21238 ETFDELHIE True H1975_Epitope_Rep2 1131.5084191655499 1131.50677490379 87.898 3 -2.1779574265367825 0.46084494448997837 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5', 'NCKAP5|p.Q769Efs*20|1|0.07|ENSG00000176771|chr2:132784506-132784507|-/GGAAACTCTC|frameshift_variant'] 67053 19656 LSPVRQDLLWP True H1975_Epitope_Rep1 1322.7346711326197 1322.73356993586 81.82 2 -2.1782229433212277 0.46084494448997837 1.0 ['ENSG00000176723|ENST00000315678|ZNF843'] 61753 24060 LLAFRWLDR True NCI_RA007_Epitope_Rep3 1188.6767623336798 1188.67566993586 104.2 2 -2.178294073741983 0.46084494448997837 1.0 ['ENST00000339659.8_1_21:38792656-38845120:+|nuORF', 'ENST00000462274.1_1_21:38739279-38845117:+|nuORF'] 55588 7430 LAHPRTLA True PC9_epitope_Rep4 877.5133854066901 877.5122899358599 35.93 2 -2.1783282873404763 0.46084494448997837 1.0 ['ENSG00000187566|ENST00000340650|NHLRC1'] 82090 17984 PMPFPYPLPQP True NCI_RA007_Epitope_Rep4 1282.64201661774 1282.64090993586 77.816 2 -2.178601942991771 0.46084494448997837 1.0 ['ENSG00000132635|ENST00000360652|PCED1A', 'nc|ENSG00000132635|Q9H1Q7-2|PCED1A'] 127947 15370 VPHALTSS True NCI_RA007_Epitope_Rep5 810.4235673427801 810.42246993586 65.827 2 -2.178924802800756 0.46085068335675056 1.0 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'ENST00000470191.5_1_9:15845666-15971831:+|nuORF'] 136374 23757 WTIFLFLRWVL True PC9_epitope_Rep3 1492.8594777229198 1492.85838993586 96.666 2 -2.179347132245725 0.4608940926024481 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 61743 22849 LLAFAKNL True NCI_RA007_Epitope_Rep1 888.54328855264 888.54218993586 93.761 2 -2.1793684041338417 0.4608940926024481 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 53563 25254 KRQRWRRR True PC9_epitope_Rep2 1240.7489732708398 1240.74837496793 102.81 1 -2.1796206647447782 0.460906401004747 1.0 ['FRMPD4|p.A947Qfs*130|1|0.11|ENSG00000169933|chrX:12717658-12717658|C/-|frameshift_variant'] 96899 24833 SATVKVQG True PC9_epitope_Rep3 788.4392174069199 788.43812993586 100.9 2 -2.1796980382187634 0.460906401004747 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN'] 83701 24061 PVFRITLPVLA True PC9_epitope_Rep1 1224.7594293284799 1224.75832993586 97.361 2 -2.179780793561646 0.460906401004747 1.0 ['ENSG00000174951|ENST00000645652|FUT1'] 122950 20823 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 87.083 2 -2.1797962189572915 0.460906401004747 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 54158 23445 KVRFKKVEF True H1975_Epitope_Rep1 1179.7128134892298 1179.7111649037902 97.429 3 -2.180107341568244 0.4609227821829599 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49'] 98565 9082 SFQYPTTA True PC9_epitope_Rep2 913.41814760917 913.41704993586 40.276 2 -2.1802977124289664 0.4609252775087536 1.0 ['nc|ENSG00000160588|Q6UWV2-2|MPZL3', 'ENSG00000160588|ENST00000278949|MPZL3'] 128695 972 VPVVGKKA True NCI_RA007_Epitope_Rep1 796.5170738047998 796.51596993586 5.1298 2 -2.1803944460471967 0.4609252775087536 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 112900 15609 TLKVLRHHQ True PC9_epitope_Rep4 1130.66726027914 1130.6661699358601 67.964 2 -2.1804198689543517 0.4609252775087536 1.0 ['ENSG00000173614|ENST00000377205|NMNAT1'] 49805 23219 KHLKTLPMVP True PC9_epitope_Rep1 1162.6896355165 1162.68799490379 94.111 3 -2.18044303486207 0.4609252775087536 1.0 ['ABCG5|p.F356S|1|0.22|ENSG00000138075|chr2:43824270-43824270|A/G|missense_variant', 'ENSG00000138075|ENST00000405322|ABCG5'] 96767 8395 SAPCPVPG True H1975_Epitope_Rep1 726.3370608375 726.33651496793 37.219 1 -2.1805932755221575 0.4609252775087536 1.0 ['ENST00000477234.1_1_22:50905166-50905766:-|nuORF'] 114329 25229 TPRASVGN True PC9_epitope_Rep3 800.41406528824 800.41296993586 102.42 2 -2.1806304129745455 0.4609252775087536 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'SLX4|p.V1558Cfs*3|1|0.16|ENSG00000188827|chr16:3584840-3584840|G/-|frameshift_variant', 'ENSG00000188827|ENST00000294008|SLX4'] 102235 12508 SLSFSIPR True PC9_epitope_Rep5 905.4970666362099 905.49596993586 53.111 2 -2.1806915425802513 0.46092610921320093 1.0 ['ZNF202|p.P280S|1|0.17|ENSG00000166261|chr11:123727590-123727590|G/A|missense_variant'] 48627 25246 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 105.01 3 -2.180713078077459 0.46092610921320093 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 53063 4438 KPPEGARAP True PC9_epitope_Rep3 921.5032146458099 921.50210993586 22.169 2 -2.1810069270929513 0.4609375831426595 1.0 ['ENST00000399413.3_1_17:7983259-7983811:+|nuORF'] 73624 6935 MWNKELYVREQ True PC9_epitope_Rep3 1494.72893412918 1494.72727490379 31.688 3 -2.181261924752205 0.4609375831426595 1.0 ['ENSG00000162402|ENST00000294383|USP24'] 94121 24842 RRLRKALLEKG True PC9_epitope_Rep2 1338.8571863071395 1338.85555490379 101.24 3 -2.1814722064932988 0.4609507188387907 1.0 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000469599.6_1_Y:21877495-21878275:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'KDM5C|p.Q1020Rfs*35|1|0.35|ENSG00000126012|chrX:53195977-53195977|T/-|frameshift_variant', 'nc|ENSG00000126012|P41229-4|KDM5C'] 120212 6996 VEAQNGSES True H1975_Epitope_Rep2 919.3883040328699 919.38775496793 31.834 1 -2.181504406212751 0.4609507188387907 1.0 ['ENST00000375206.6_1_9:100008408-100053768:+|nuORF', 'ENST00000375204.2_1_9:100008408-100054866:+|nuORF', 'ENST00000527128.5_1_9:100008408-100053855:+|nuORF'] 38148 23306 HDDFADDISL True PC9_epitope_Rep6 1146.4829326937 1146.48127490379 102.75 3 -2.1816404432094902 0.4609507188387907 1.0 ['nc|ENSG00000186318|P56817-6|BACE1', 'nc|ENSG00000186318|P56817-5|BACE1', 'nc|ENSG00000186318|P56817-4|BACE1', 'nc|ENSG00000186318|P56817-3|BACE1', 'nc|ENSG00000186318|P56817-2|BACE1', 'ENSG00000186318|ENST00000313005|BACE1'] 62648 24249 LLLFIFFIPAF True PC9_epitope_Rep2 1339.7944178548698 1339.79278490379 98.814 3 -2.181797884798857 0.4609507188387907 1.0 ['ENST00000377270.7_1_9:71687674-71687986:+|nuORF'] 114330 24403 TPRASVGN True PC9_epitope_Rep4 800.41406528824 800.41296993586 102.35 2 -2.1821859297603523 0.4609507188387907 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'SLX4|p.V1558Cfs*3|1|0.16|ENSG00000188827|chr16:3584840-3584840|G/-|frameshift_variant', 'ENSG00000188827|ENST00000294008|SLX4'] 120420 19550 VEEPLSRGL True PC9_epitope_Rep1 998.53965972418 998.53856993586 80.024 2 -2.1822703464093296 0.4609507188387907 1.0 ['ENST00000358595.9_2_1:150825241-150830924:-|nuORF'] 27321 21394 FLRVRANR True PC9_epitope_Rep6 1030.6148307834599 1030.6137299358602 95.165 2 -2.182863616093052 0.46096219126770455 1.0 ['ENST00000475378.5_1_1:45097966-45116444:+|nuORF', 'nc|ENSG00000187147|Q5VTB9-3|RNF220', 'ENSG00000187147|ENST00000361799|RNF220'] 38202 7067 HDYELRVLCCE True NCI_RA007_Epitope_Rep2 1378.6009567347398 1378.5998499358602 32.113 2 -2.1830800214879127 0.46096219126770455 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S4608Afs*30|1|0.17|ENSG00000117983|chr11:1250700-1250700|C/-|frameshift_variant', 'MUC5B|p.S3350Pfs*13|1|0.28|ENSG00000117983|chr11:1246923-1246923|C/-|frameshift_variant', 'MUC5B|p.H2247Pfs*56|1|0.2|ENSG00000117983|chr11:1243615-1243627|CCAGCACTCGACT/-|frameshift_variant', 'MUC5B|p.P1935Lfs*5|1|0.25|ENSG00000117983|chr11:1242680-1242680|C/-|frameshift_variant'] 89964 4773 RDFPNRWEYYL True H1975_Epitope_Rep3 1557.73646203777 1557.73536993586 23.486 2 -2.18320054834484 0.4609679272990402 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1', 'APAF1|p.E478Kfs*26|1|0.19|ENSG00000120868|chr12:98667581-98667581|G/-|frameshift_variant', 'APAF1|p.I821Kfs*48|1|0.12|ENSG00000120868|chr12:98699564-98699565|-/AAGAAAAAGTT|frameshift_variant'] 52625 19140 KLPCMKVS True NCI_RA007_Epitope_Rep2 904.48743055264 904.48632993586 79.316 2 -2.1836777196951953 0.4609900400102154 1.0 ['ENST00000370520.3_1_20:61273322-61274596:-|nuORF'] 82108 23136 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 96.246 2 -2.1837263620537724 0.4609900400102154 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 15576 7583 EAQPQLLDLRI True H1975_Epitope_Rep1 1294.7245003717399 1294.7234099358602 34.16 2 -2.183846760320421 0.4610064164636028 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 56031 22890 LASPEPLVA True H1975_Epitope_Rep1 895.5014833103099 895.5009349679301 95.196 1 -2.183943359800792 0.4610129814854224 1.0 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000591750.1_1_19:11346944-11347244:-|nuORF'] 128317 10736 VPPPPRISL True PC9_epitope_Rep2 974.5913013742199 974.59020993586 46.615 2 -2.1839859015029846 0.4610129814854224 1.0 ['ENST00000400445.7_1_13:35516530-35516806:+|nuORF'] 61595 14652 LKKTRKEA True NCI_RA007_Epitope_Rep5 972.6080140675199 972.60690993586 63.027 2 -2.184022246285093 0.4610129814854224 1.0 ['ENST00000397412.7_1_16:1727111-1727186:+|nuORF'] 135542 24779 WKNFKEHH True PC9_epitope_Rep2 1124.55156182056 1124.55046993586 100.99 2 -2.1842054577246772 0.4610146407899217 1.0 ['ENSG00000100867|ENST00000250383|DHRS2'] 110826 20473 TGPHCPLP True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 85.692 2 -2.1844002951439374 0.4610146407899217 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 86900 5393 QLSDVQNFPYM True PC9_epitope_Rep4 1340.607087661 1340.6059899358602 27.472 2 -2.184416982760384 0.4610146407899217 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 60570 18227 LHGASGQQ True NCI_RA007_Epitope_Rep3 796.3827651599602 796.38166993586 79.811 2 -2.18448134500614 0.4610146407899217 1.0 ['ENSG00000101407|ENST00000373447|TTI1'] 72198 20623 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 86.269 2 -2.1851270915677126 0.4610522955790818 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 139457 24033 YLQLLRTLE True PC9_epitope_Rep2 1147.6601092100298 1147.65900993586 97.94 2 -2.185181527930565 0.4610539531221739 1.0 ['ENST00000306336.5_2_2:85835478-85835544:-|nuORF'] 110493 5982 TFGGLGSL True PC9_epitope_Rep6 750.39120458534 750.39010993586 31.325 2 -2.185306848346008 0.4610539531221739 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 9024 21663 AVHASTTA True PC9_epitope_Rep6 756.3766171503601 756.37552993586 96.211 2 -2.185314384907299 0.4610539531221739 1.0 ['ENST00000591590.1_1_19:55997307-55997553:+|nuORF'] 98870 18414 SGVGKWGP True NCI_RA007_Epitope_Rep2 786.4024379753798 786.40134993586 76.392 2 -2.1854023812251593 0.4610539531221739 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 122935 17491 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 76.743 2 -2.1858308818156726 0.4610621728584195 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 55838 18470 LAPLRVPI True PC9_epitope_Rep2 877.5749230340899 877.57382993586 76.377 2 -2.1859470186497445 0.4610621728584195 1.0 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 34387 20428 GPGKADLY True H1975_Epitope_Rep2 819.4126683059098 819.41156993586 84.641 2 -2.186275156659591 0.4610621728584195 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'PIEZO2|p.N2125Tfs*10|1|0.09|ENSG00000154864|chr18:10697862-10697862|T/-|frameshift_variant', 'PIEZO2|p.S2477Lfs*18|1|0.26|ENSG00000154864|chr18:10681672-10681672|A/-|frameshift_variant'] 68533 4859 LTGHLCAP True PC9_epitope_Rep2 810.40580910366 810.40470993586 24.059 2 -2.186310062935515 0.4610621728584195 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 48844 24103 KDYNHLPT True H1975_Epitope_Rep1 986.4821448480599 986.48104993586 99.99 2 -2.1863548335500065 0.4610621728584195 1.0 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF', 'nc|ENSG00000125375|Q99766-3|DMAC2L', 'nc|ENSG00000125375|Q99766-2|DMAC2L', 'ENST00000557421.5_1_14:50779073-50792346:+|nuORF'] 39382 23078 HKIIPGFMCQ True PC9_epitope_Rep2 1172.5834561958 1172.58234993586 94.262 2 -2.1865060462257055 0.4610621728584195 1.0 ['ENST00000441944.2_1_9:7597894-7598236:+|nuORF'] 59751 11955 LGDSPIDP True H1975_Epitope_Rep3 812.39159850816 812.39105496793 51.141 1 -2.1866657682589183 0.4610621728584195 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF'] 66785 18983 LSLRQVSHPRR True PC9_epitope_Rep2 1347.7847496428699 1347.78364993586 78.383 2 -2.1869623218171723 0.461063001340454 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 61745 22908 LLAFAKNL True NCI_RA007_Epitope_Rep2 888.54328855264 888.54218993586 95.515 2 -2.1869686938421333 0.461063001340454 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 26156 24148 FHAILWHKHL True PC9_epitope_Rep2 1300.719295852 1300.7181899358602 98.411 2 -2.187311773055402 0.4610687347737742 1.0 ['nc|ENSG00000136828|Q5JS13-2|RALGPS1', 'nc|ENSG00000136828|Q5JS13-7|RALGPS1', 'ENSG00000136828|ENST00000259351|RALGPS1'] 64440 11501 LPPAQILGI True PC9_epitope_Rep6 920.5695033004799 920.56840993586 55.316 2 -2.187543770198163 0.46109574468085107 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 82811 23775 PRRRRRREER True PC9_epitope_Rep2 1465.85629187369 1465.8551899358602 96.922 2 -2.1879504816485107 0.46113339219795535 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 44239 23242 IKPHYPAWVP True PC9_epitope_Rep1 1206.6549642599398 1206.65332490379 94.191 3 -2.188057619026784 0.4611391246994745 1.0 ['IGSF3|p.K1161Rfs*33|1|0.26|ENSG00000143061|chr1:116577417-116577417|C/-|frameshift_variant', 'ENSG00000143061|ENST00000369486|IGSF3', 'nc|ENSG00000143061|O75054-2|IGSF3'] 45649 21450 IREEVRHWRPR True NCI_RA007_Epitope_Rep1 1532.8436615013197 1532.8425699358602 87.767 2 -2.1889486974188657 0.4611726911048231 1.0 ['ENST00000469506.3_1_3:42201841-42226383:+|nuORF'] 84115 12740 PWSQVLPVR True PC9_epitope_Rep6 1080.60801406752 1080.6069099358601 60.491 2 -2.1891289821139113 0.4611726911048231 1.0 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 20490 22266 EPLPLAYA True NCI_RA007_Epitope_Rep4 872.4643695255999 872.46326993586 96.585 2 -2.189138947686636 0.4611726911048231 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 124581 8418 VGVSSRPL True PC9_epitope_Rep2 813.4708518883699 813.46974993586 37.751 2 -2.189156980629016 0.4611726911048231 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'CATSPERG|p.E408Vfs*5|1|0.3|ENSG00000099338|chr19:38356769-38356770|AA/-|frameshift_variant'] 52369 23490 KKKRSEARRH True PC9_epitope_Rep2 1294.7694339318998 1294.76779490379 95.825 3 -2.1894832816528003 0.4611996978948376 1.0 ['ENSG00000173699|ENST00000433428|SPATA3'] 132618 24042 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 99.002 2 -2.1897152674356817 0.4612217979129658 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 122971 22153 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 98.153 2 -2.1899352385502304 0.4612217979129658 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 93012 20632 RPKREKHPKKP True NCI_RA007_Epitope_Rep1 1399.8524352798695 1399.8513299358601 84.479 2 -2.1904991547631396 0.4612545340438885 1.0 ['ENSG00000135250|ENST00000393651|SRPK2'] 52917 23285 KPGKDIRN True PC9_epitope_Rep5 926.52976374682 926.52866993586 94.549 2 -2.1905482007386987 0.4612545340438885 1.0 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 120997 20104 VEPSEGAPRAP True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 82.583 2 -2.1908732025496014 0.46127090158703143 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'STRN4|p.V351Sfs*20|1|0.27|ENSG00000090372|chr19:46727996-46727996|C/-|frameshift_variant', 'nc|ENSG00000090372|Q9NRL3-2|STRN4'] 39707 19639 HLTDEPPL True PC9_epitope_Rep2 920.46034677432 920.45924993586 80.926 2 -2.1911194234244786 0.4612766319551551 1.0 ['ENST00000483873.6_1_9:135545612-135545816:+|nuORF'] 81112 25250 PKARGGCP True NCI_RA007_Epitope_Rep4 784.4013924295599 784.40028993586 110.05 2 -2.1911771205197703 0.46127827946009764 1.0 ['ENST00000485732.5_1_9:139747929-139748217:+|nuORF'] 69595 18926 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 82.731 2 -2.191369153680044 0.46127827946009764 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 49808 22457 KHLQKQEGA True PC9_epitope_Rep6 1037.5617921510898 1037.5606899358602 99.376 2 -2.1914675962998436 0.46127827946009764 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.R1905Kfs*42|1|0.12|ENSG00000091656|chr8:76852635-76852635|G/-|frameshift_variant', 'ZFHX4|p.K2332Tfs*56|1|0.29|ENSG00000091656|chr8:76853915-76853927|AAAAAGCAGTGTT/-|frameshift_variant', 'ZFHX4|p.T2572Qfs*7|1|0.19|ENSG00000091656|chr8:76854630-76854630|C/-|frameshift_variant', 'ZFHX4|p.G2819Efs*15|1|0.2|ENSG00000091656|chr8:76855375-76855375|G/-|frameshift_variant', 'ZFHX4|p.K3217Qfs*19|1|0.09|ENSG00000091656|chr8:76863358-76863359|-/C|frameshift_variant', 'ZFHX4|p.T1761Hfs*7|1|0.37|ENSG00000091656|chr8:76852200-76852200|C/-|frameshift_variant', 'ZFHX4|p.P1752Qfs*16|1|0.1|ENSG00000091656|chr8:76852171-76852171|G/-|frameshift_variant'] 97182 10390 SDVERLER True NCI_RA007_Epitope_Rep1 1002.5094222250599 1002.50832993586 44.397 2 -2.1914977208581283 0.46127827946009764 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000494465.5_1_2:242611409-242611676:+|nuORF', 'ENST00000475693.1_1_2:242607884-242611676:+|nuORF'] 86692 6732 QLITGTEPDTI True NCI_RA007_Epitope_Rep1 1186.60813320682 1186.60702993586 30.196 2 -2.1918106768934646 0.4613061050840247 1.0 ['nc|ENSG00000266200|P54317|PNLIPRP2'] 84275 24377 PYPDFLPP True NCI_RA007_Epitope_Rep5 944.4643695256 944.46326993586 101.23 2 -2.192046696003821 0.4613061050840247 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 36287 16374 GVEATKTK True NCI_RA007_Epitope_Rep1 832.4654321547599 832.4648849679301 67.805 1 -2.192069725539365 0.4613061050840247 1.0 ['nc|ENSG00000089847|Q8TF21-2|ANKRD24', 'ENSG00000089847|ENST00000318934|ANKRD24'] 110163 6141 TEPLTRTL True H1975_Epitope_Rep3 929.51819600361 929.51708993586 28.632 2 -2.192353029671278 0.4613331064336691 1.0 ['INCENP|p.P193T|1|0.06|ENSG00000149503|chr11:62130104-62130104|C/A|missense_variant'] 127477 26661 VNLKLGDD True H1975_Epitope_Rep3 872.4603467743199 872.45924993586 111.34 2 -2.1927391228153943 0.4613863070804177 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 122946 23480 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 101.89 2 -2.1929602268640784 0.4613863070804177 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 53848 21332 KTHAAETEM True NCI_RA007_Epitope_Rep5 1016.45969515132 1016.45858993586 89.11 2 -2.1933296294230016 0.4613863070804177 1.0 ['ENSG00000154240|ENST00000535342|CEP112', 'ENST00000580482.5_1_17:63793289-63848140:-|nuORF'] 137328 9129 YDGKIYTLG True NCI_RA007_Epitope_Rep1 1028.5178616504397 1028.51676993586 39.511 2 -2.193359282354915 0.4613863070804177 1.0 ['ENST00000471654.1_1_2:23914526-23929531:+|nuORF', 'nc|ENSG00000119771|Q96CT2-2|KLHL29', 'ENSG00000119771|ENST00000486442|KLHL29'] 93589 17773 RQNQSNLK True H1975_Epitope_Rep2 986.52574099554 986.52464993586 73.684 2 -2.193529955609995 0.4613863070804177 1.0 ['nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2', 'nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2'] 92145 9080 RLEFLPRESV True PC9_epitope_Rep2 1244.6877209402 1244.68606490379 40.269 3 -2.1935959377757013 0.4613863070804177 1.0 ['ENST00000444836.5_1_1:12072009-12072201:+|nuORF'] 4290 12354 AIGTEAQRV True PC9_epitope_Rep2 943.5086939490699 943.50758993586 52.83 2 -2.193722658682326 0.4613863070804177 1.0 ['ENST00000579585.5_1_17:61771267-61771504:+|nuORF'] 115353 18079 TRIQLQKG True NCI_RA007_Epitope_Rep1 942.5610638750999 942.55996993586 74.464 2 -2.193755705854328 0.4613863070804177 1.0 ['ZDHHC6|p.P347T|1|0.21|ENSG00000023041|chr10:112432428-112432428|G/T|missense_variant'] 122933 16957 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 74.563 2 -2.1937568579530717 0.4613863070804177 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 130023 23666 VSALRQELRRR True PC9_epitope_Rep2 1382.8218634275797 1382.82022490379 96.505 3 -2.1937887067605297 0.4613863070804177 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.D1881Tfs*89|1|0.38|ENSG00000130589|chr20:63563181-63563181|C/-|frameshift_variant', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 94868 25593 RSYKQKKK True PC9_epitope_Rep5 1064.6454622054 1064.6443699358601 103.76 2 -2.193853687898195 0.4613863070804177 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 1370 7224 AEEDHQLF True H1975_Epitope_Rep2 987.4297749220299 987.42922496793 32.721 1 -2.19385466780434 0.4613863070804177 1.0 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF'] 135686 26685 WLPTMRNLF True PC9_epitope_Rep1 1176.6113851958 1176.60973490379 108.47 3 -2.193869420295412 0.4613863070804177 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 91823 24693 RKKDLELHV True PC9_epitope_Rep4 1136.6665915728 1136.66548993586 103.48 2 -2.194409871112355 0.4614026692189079 1.0 ['ENSG00000101493|ENST00000443185|ZNF516'] 81204 17477 PKGQQGVR True H1975_Epitope_Rep2 868.4878989348398 868.48680993586 72.515 2 -2.19461259779095 0.4614190310094007 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF', 'ENST00000427563.1_1_1:40768460-40770015:-|nuORF'] 137820 22253 YEQVLHHI True H1975_Epitope_Rep2 1037.52942939365 1037.52832993586 91.965 2 -2.1947906929304626 0.4614247583398024 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2'] 30576 9765 GAIASRMS True H1975_Epitope_Rep1 791.39597269595 791.39486993586 42.491 2 -2.195085822015758 0.461441119547417 1.0 ['nc|ENSG00000186575|P35240-2|NF2', 'nc|ENSG00000186575|P35240-4|NF2', 'NF2|p.E522Rfs*20|1|0.22|ENSG00000186575|chr22:29678311-29678312|-/A|frameshift_variant', 'nc|ENSG00000186575|P35240-6|NF2', 'nc|ENSG00000186575|P35240-5|NF2', 'nc|ENSG00000186575|P35240-8|NF2', 'nc|ENSG00000186575|P35240-3|NF2', 'ENSG00000186575|ENST00000338641|NF2', 'nc|ENSG00000186575|P35240-9|NF2', 'NF2|p.S138Lfs*36|1|0.06|ENSG00000186575|chr22:29642249-29642249|T/-|frameshift_variant', 'nc|ENSG00000186575|P35240-10|NF2', 'nc|ENSG00000186575|P35240-7|NF2'] 111806 19889 TILLTKFFMLL True NCI_RA007_Epitope_Rep4 1338.79851725914 1338.79740993586 85.971 2 -2.1957381269042076 0.4614583001031465 1.0 ['ENSG00000158158|ENST00000377075|CNNM4'] 119085 11655 VAGPGFGG True NCI_RA007_Epitope_Rep1 660.3231250255199 660.3225749679301 49.308 1 -2.1957786327680475 0.4614583001031465 1.0 ['nc|ENSG00000099904|Q9ULC8-2|ZDHHC8', 'ENSG00000099904|ENST00000334554|ZDHHC8', 'nc|ENSG00000099904|Q9ULC8-3|ZDHHC8'] 12523 8076 DKKGCHCVI True PC9_epitope_Rep2 1001.4786567740899 1001.47754993586 36.423 2 -2.1958197934754535 0.4614583001031465 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2', 'nc|ENSG00000133818|P62070-2|RRAS2'] 119159 10624 VAIQTIEEHP True PC9_epitope_Rep3 1135.5873381925899 1135.58569490379 45.814 3 -2.196294673857806 0.46146402671146936 1.0 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292'] 26581 14669 FILFILFRT True H1975_Epitope_Rep1 1168.7008518231996 1168.6997499358602 61.64 2 -2.1965978610693453 0.4614803866316472 1.0 ['ENST00000521861.5_2_8:117656215-117656317:-|nuORF'] 89553 18022 QYLVLEEL True PC9_epitope_Rep6 1005.5382627418498 1005.53716993586 81.949 2 -2.196719222641121 0.4614861128833312 1.0 ['ENSG00000110921|ENST00000228510|MVK'] 65509 3907 LRNKFAQKMLQ True PC9_epitope_Rep3 1375.7758247519498 1375.77418490379 20.132 3 -2.1972972730067237 0.4615131054282524 1.0 ['ENST00000411964.2_1_1:110194089-110194182:+|nuORF'] 93342 21666 RPWHEYEH True NCI_RA007_Epitope_Rep5 1152.5100909313999 1152.5089899358602 90.434 2 -2.1974477238627057 0.46151392388911927 1.0 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4'] 126645 26038 VLNQEVRKHLK True H1975_Epitope_Rep1 1362.80956740838 1362.80791490379 108.08 3 -2.197519539335016 0.46151392388911927 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1'] 30021 9345 FYEAAPGPP True PC9_epitope_Rep2 947.4388830537498 947.43778993586 41.283 2 -2.1980004649562876 0.4615523657628921 1.0 ['ENSG00000128713|ENST00000249504|HOXD11'] 79802 14231 PEEQLPKT True PC9_epitope_Rep4 940.48656152216 940.48601496793 62.647 1 -2.1980195187926 0.4615523657628921 1.0 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 101431 21228 SLKRQSAAVW True PC9_epitope_Rep4 1144.63529144452 1144.6341899358601 89.818 2 -2.1982908539427477 0.4615523657628921 1.0 ['ENST00000528968.5_1_11:3000463-3009353:-|nuORF'] 27660 18238 FPFVRVSSS True NCI_RA007_Epitope_Rep2 1024.53418042092 1024.53308993586 75.699 2 -2.1985208896566832 0.4615793558813835 1.0 ['ENST00000483354.5_1_20:3204111-3204312:+|nuORF'] 98871 17865 SGVGKWGP True NCI_RA007_Epitope_Rep4 786.4024379753798 786.40134993586 77.344 2 -2.1988088508098125 0.4615850805937141 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 42794 11631 IENLRQQAHK True PC9_epitope_Rep5 1235.67346785839 1235.6723699358602 49.733 2 -2.1988761857625736 0.4615858974631595 1.0 ['ENSG00000171951|ENST00000305409|SCG2'] 23408 7001 EVSQKSLWN True NCI_RA007_Epitope_Rep1 1089.5454733806098 1089.54436993586 31.23 2 -2.1990766453514774 0.4615858974631595 1.0 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.E1748Rfs*44|1|0.18|ENSG00000122728|chr9:32630339-32630339|T/-|frameshift_variant', 'ENST00000483365.1_1_X:70596867-70597689:+|nuORF', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1', 'TAF1|p.G1268Vfs*6|1|0.17|ENSG00000147133|chrX:71401546-71401546|G/-|frameshift_variant'] 119445 16970 VARAINQK True NCI_RA007_Epitope_Rep5 898.5348491272599 898.53374993586 72.034 2 -2.1994758634854104 0.4615867142978651 1.0 ['ENSG00000215305|ENST00000380445|VPS16', 'VPS16|p.N709Kfs*18|1|0.22|ENSG00000215305|chr20:2865269-2865278|ACAAGCGTGC/-|frameshift_variant', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000487461.1_1_20:2844020-2844759:+|nuORF'] 102591 18541 SLWEEFLHL True NCI_RA007_Epitope_Rep5 1172.5866099165999 1172.58550993586 78.144 2 -2.1995259322321887 0.4615867142978651 1.0 ['nc|ENSG00000235865|Q9NRJ2|GSN-AS1'] 122926 21946 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 91.741 2 -2.1997347815358337 0.4615981628356971 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 128694 772 VPVVGKKA True NCI_RA007_Epitope_Rep1 796.5170738047998 796.51596993586 4.0924 2 -2.199937336939346 0.4615981628356971 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 104453 18902 SQLKQWKHF True NCI_RA007_Epitope_Rep4 1200.64037682496 1200.63926993586 81.732 2 -2.20002330540717 0.4616038869220383 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 86925 12461 QLTPEIKSK True PC9_epitope_Rep1 1042.60225998074 1042.60116993586 52.797 2 -2.200608494588245 0.461662768445673 1.0 ['ENSG00000175899|ENST00000318602|A2M'] 99066 19303 SHGGLDIV True PC9_epitope_Rep6 796.4079172786401 796.40682993586 86.896 2 -2.200921360303912 0.46166849172345603 1.0 ['nc|ENSG00000124233|P04279-2|SEMG1', 'ENSG00000124233|ENST00000372781|SEMG1'] 101275 20259 SLIDMNDIEDD True PC9_epitope_Rep4 1278.52856255678 1278.5274699358602 86.069 2 -2.2011313446837546 0.4616725664657546 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 104736 21988 SQVELQAA True PC9_epitope_Rep6 844.4290466460398 844.4279499358599 97.498 2 -2.2016434277869 0.4616725664657546 1.0 ['nc|ENSG00000147573|Q9BYV6-2|TRIM55', 'nc|ENSG00000147573|Q9BYV6-3|TRIM55', 'ENSG00000147573|ENST00000315962|TRIM55'] 136544 19763 WWFQLLLDIQ True NCI_RA007_Epitope_Rep5 1360.7179584393198 1360.7163149037901 82.929 3 -2.202069257407172 0.4616725664657546 1.0 ['ENSG00000179300|ENST00000321110|RTL3'] 120270 18940 VEDEAETKK True NCI_RA007_Epitope_Rep2 1047.5084191655499 1047.5078749679299 78.515 1 -2.2021939572156795 0.4616725664657546 1.0 ['nc|ENSG00000099864|O75781-2|PALM', 'ENSG00000099864|ENST00000338448|PALM'] 8264 21854 ATHSSHGP True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 90.374 2 -2.2025355404014983 0.4616725664657546 1.0 ['nc|ENSG00000204305|Q15109-3|AGER', 'nc|ENSG00000204305|Q15109-4|AGER', 'nc|ENSG00000204305|Q15109-10|AGER', 'nc|ENSG00000204305|Q15109-7|AGER', 'ENSG00000204305|ENST00000375076|AGER', 'nc|ENSG00000204305|Q15109-6|AGER'] 135683 26152 WLPTMRNLF True PC9_epitope_Rep1 1176.6113851958 1176.60973490379 105.91 3 -2.2025907194112606 0.4616725664657546 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 32282 23778 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 98.813 2 -2.2027186722234577 0.4616725664657546 1.0 ['SERPINA3|p.A83Pfs*14|1|0.22|ENSG00000196136|chr14:94614686-94614686|C/-|frameshift_variant', 'nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 63700 21337 LMWIIKHF True NCI_RA007_Epitope_Rep4 1086.60484326338 1086.6037499358602 92.49 2 -2.2029086926021275 0.4616725664657546 1.0 ['ENST00000518667.1_1_8:66643803-66660021:-|nuORF'] 68528 4367 LTGHLCAP True NCI_RA007_Epitope_Rep3 810.40580910366 810.40470993586 23.944 2 -2.202957427310692 0.4616725664657546 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 129735 25064 VRQGGGGV True PC9_epitope_Rep2 728.3929359208399 728.3923849679301 102.08 1 -2.2030129022566127 0.4616725664657546 1.0 ['ENST00000271526.8_1_1:156737292-156737367:+|nuORF'] 91967 24982 RKPKKLQYA True PC9_epitope_Rep5 1130.69241239782 1130.69130993586 101.26 2 -2.203476964572002 0.461694641395512 1.0 ['ENSG00000146247|ENST00000275034|PHIP', 'ENST00000479165.1_1_6:79650412-79665440:-|nuORF'] 58945 7684 LETRCARSV True PC9_epitope_Rep5 1033.53386315109 1033.5327699358602 34.501 2 -2.2035023059933088 0.461694641395512 1.0 ['ENST00000344413.5_1_4:72897830-73003834:+|nuORF'] 83721 7353 PVGLPGRPGT True PC9_epitope_Rep4 949.53451477409 949.53340993586 35.618 2 -2.2039172045048834 0.46170036354359334 1.0 ['ENST00000309957.2_2_13:111289482-111290624:+|nuORF'] 78829 8655 PADPGPASP True PC9_epitope_Rep5 807.37628279719 807.37518993586 38.235 2 -2.204419511276038 0.46172078439708775 1.0 ['ENSG00000103154|ENST00000305202|NECAB2', 'NECAB2|p.F333Lfs*33|1|0.31|ENSG00000103154|chr16:84000756-84000756|C/-|frameshift_variant'] 110783 10134 TGILFPPGSCL True PC9_epitope_Rep1 1103.5685173243098 1103.56740993586 43.855 2 -2.204496027252085 0.46172078439708775 1.0 ['ENST00000375893.6_1_6:31632636-31633398:-|nuORF', 'ENST00000375895.6_1_6:31632636-31633491:-|nuORF'] 129703 18834 VRPQMETT True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 79.289 2 -2.20522812723725 0.46172078439708775 1.0 ['ENST00000423112.2_1_9:3568814-3671485:+|nuORF'] 62332 9056 LLGFVRQV True NCI_RA007_Epitope_Rep4 930.5650866263799 930.56398993586 41.667 2 -2.2053508729027387 0.46172078439708775 1.0 ['nc|ENSG00000173482|P28827|PTPRM', 'ENSG00000173482|ENST00000580170|PTPRM', 'ENST00000577827.5_1_18:8296422-8376613:+|nuORF', 'ENSG00000196090|ENST00000373187|PTPRT', 'nc|ENSG00000196090|O14522-1|PTPRT'] 83879 24889 PVPHSVLL True H1975_Epitope_Rep2 860.51198842436 860.51088993586 102.31 2 -2.2056158895196205 0.46172078439708775 1.0 ['ENST00000482143.5_1_1:46649328-46650297:+|nuORF', 'ENST00000482928.5_1_1:46646779-46650297:+|nuORF'] 3443 6165 AGKSCGAG True NCI_RA007_Epitope_Rep1 649.28535961781 649.2848149679301 28.017 1 -2.2056531507350834 0.46172078439708775 1.0 ['ENSG00000140968|ENST00000268638|IRF8', 'IRF8|p.M391K|1|0.06|ENSG00000140968|chr16:85921173-85921173|T/A|missense_variant'] 45323 6489 IQALEDTH True PC9_epitope_Rep1 925.4505103666099 925.44940993586 29.764 2 -2.205672968434808 0.46172078439708775 1.0 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'PRR12|p.R1165Lfs*35|1|0.18|ENSG00000126464|chr19:49625192-49625193|-/T|frameshift_variant', 'ENSG00000126464|ENST00000418929|PRR12'] 18424 21974 EIWKFSTYL True PC9_epitope_Rep6 1185.60701100801 1185.6053549037902 97.442 3 -2.2056963708300774 0.46172078439708775 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2'] 89044 22367 QVLKGMFV True PC9_epitope_Rep5 920.5153595526399 920.5142699358599 91.046 2 -2.2056996657652435 0.46172078439708775 1.0 ['nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 61741 24723 LLAFAKNL True H1975_Epitope_Rep3 888.54328855264 888.54218993586 102.84 2 -2.2058170768338874 0.46172078439708775 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 27525 23349 FMVTESLM True H1975_Epitope_Rep2 956.43472627344 956.43362993586 96.279 2 -2.205833246284828 0.46172078439708775 1.0 ['ENST00000470674.1_1_2:15767207-15768581:+|nuORF'] 6722 19794 AQAPFGGF True PC9_epitope_Rep4 793.3758888743699 793.37534496793 84.263 1 -2.205939786067047 0.46172485254264306 1.0 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 139719 23697 YNPNLKKV True NCI_RA007_Epitope_Rep5 974.5549158655 974.55380993586 98.488 2 -2.206203992081841 0.46172485254264306 1.0 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 259 10423 AAGGKSSP True H1975_Epitope_Rep1 673.33950336565 673.33895496793 45.045 1 -2.2066213888289283 0.46172485254264306 1.0 ['ENST00000475699.5_1_X:153649641-153649923:+|nuORF'] 67136 14818 LSQPEVAAH True PC9_epitope_Rep1 950.4821448480598 950.48159496793 61.818 1 -2.2066937786627876 0.46172485254264306 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 3476 21331 AGLEVPPEEM True PC9_epitope_Rep2 1070.4954119536999 1070.49487496793 87.514 1 -2.206790952548307 0.46172485254264306 1.0 ['nc|ENSG00000150676|Q8IWF9-2|CCDC83', 'nc|ENSG00000150676|Q8IWF9-3|CCDC83', 'ENSG00000150676|ENST00000342404|CCDC83'] 135249 23581 WFLNRKIIIH True PC9_epitope_Rep5 1338.79246079226 1338.79081490379 95.688 3 -2.2070918503457455 0.46172485254264306 1.0 ['ENST00000311806.7_1_3:38295131-38295401:+|nuORF'] 72435 21431 MKPAIAPK True PC9_epitope_Rep4 854.5047948689399 854.50368993586 90.611 2 -2.207098343545272 0.46172485254264306 1.0 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 123895 22860 VGRRRRHR True PC9_epitope_Rep3 1091.6649092937098 1091.66437496793 93.2 1 -2.2072567823052003 0.46172485254264306 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 60645 23227 LHLACQKG True PC9_epitope_Rep6 868.4589073056801 868.45780993586 102.44 2 -2.2072648038634544 0.46172485254264306 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 135557 20206 WKTLKMLNFRL True NCI_RA007_Epitope_Rep4 1448.8326113520798 1448.8309649037901 87.425 3 -2.2074330424502944 0.46172485254264306 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 30620 12816 GAKGKGGG True NCI_RA007_Epitope_Rep4 630.3449230992599 630.3443749679301 56.375 1 -2.2088995094532073 0.46180496514198266 1.0 ['ENST00000569326.2_1_8:145724500-145725055:-|nuORF'] 40624 8382 HRLLLLGRKV True NCI_RA007_Epitope_Rep3 1203.7927951454299 1203.7911449037902 40.068 3 -2.2089857110164752 0.46180577695593955 1.0 ['nc|ENSG00000087460|Q5JWF2-3|GNAS'] 84078 3610 PWDWQIGLLY True H1975_Epitope_Rep3 1289.6444591458899 1289.64280490379 18.903 3 -2.2090318426255546 0.46180577695593955 1.0 ['ENSG00000196376|ENST00000360388|SLC35F1', 'nc|ENSG00000196376|Q5T1Q4-2|SLC35F1', 'SLC35F1|p.V287F|1|0.07|ENSG00000196376|chr6:118285195-118285195|G/T|missense_variant'] 110830 25202 TGPKKFIV True NCI_RA007_Epitope_Rep1 888.5432885526399 888.54274496793 104.28 1 -2.209408709599209 0.4618327506137153 1.0 ['ENSG00000163810|ENST00000296125|TGM4'] 93724 15716 RQYPRLTR True NCI_RA007_Epitope_Rep4 1088.6203100867199 1088.61920993586 68.251 2 -2.2095643215962726 0.46183356181124535 1.0 ['ENST00000336314.8_2_5:154195475-154195619:+|nuORF'] 33280 18662 GKKRHQNHRI True NCI_RA007_Epitope_Rep3 1272.72756911992 1272.72697496793 81.644 1 -2.2095966517949703 0.46183356181124535 1.0 ['ENST00000593438.1_1_7:27155866-27156094:+|nuORF'] 92264 23164 RLKTAAAAAA True PC9_epitope_Rep2 942.5610638750998 942.55996993586 94.586 2 -2.2099411507361717 0.46183928078042974 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 122088 23137 VGAAIRKW True PC9_epitope_Rep5 899.5341208512699 899.53357496793 93.985 1 -2.2108294185816755 0.4618875062431591 1.0 ['nc|ENSG00000176273|Q2M3R5-2|SLC35G1', 'ENSG00000176273|ENST00000427197|SLC35G1'] 48600 25140 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 103.29 3 -2.210997202114227 0.46189322451755505 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 84641 9079 QDGDVIAPLI True H1975_Epitope_Rep1 1039.5549754351498 1039.5538699358601 39.828 2 -2.211323665433552 0.46189894267042136 1.0 ['nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 54229 26964 KWDQLYYFK True H1975_Epitope_Rep3 1289.6444591458896 1289.64280490379 112.84 3 -2.211677237469254 0.4619259133317748 1.0 ['ARHGAP24|p.G45W|1|0.39|ENSG00000138639|chr4:85570674-85570674|G/T|missense_variant'] 135675 25483 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 107.62 3 -2.2118873345238237 0.4619316310157587 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 122969 21793 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 96.719 2 -2.212205608715136 0.4619692268457517 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 30220 4956 FYTDFMGEVV True NCI_RA007_Epitope_Rep1 1206.52671208198 1206.52507490379 23.361 3 -2.212421289829308 0.4619749439479752 1.0 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 13396 6757 DLYLWLSYRFM True H1975_Epitope_Rep1 1505.7377079077298 1505.73607490379 31.03 3 -2.2124615034508865 0.46198066092870044 1.0 ['ENSG00000156502|ENST00000359655|SUPV3L1'] 126625 7689 VLNENNVPL True PC9_epitope_Rep3 1010.53965972418 1010.53856993586 34.573 2 -2.2124867797059253 0.4619863777879313 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 35438 21017 GSGLKAWP True H1975_Epitope_Rep2 814.43373810366 814.43264993586 86.994 2 -2.212648583647653 0.46198880117300806 1.0 ['ENST00000512406.5_1_5:8452349-8457673:-|nuORF'] 62143 2825 LLEGTPDTP True NCI_RA007_Epitope_Rep1 941.4705771048499 941.46948993586 14.816 2 -2.2128336049955823 0.46198880117300806 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 100381 21422 SKTSGKAK True PC9_epitope_Rep3 805.4657665079299 805.46466993586 87.692 2 -2.2129066718187187 0.46198880117300806 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 54076 20781 KVLAPKCA True PC9_epitope_Rep4 828.4891448047999 828.48804993586 88.082 2 -2.212941938194407 0.46198880117300806 1.0 ['ENSG00000144791|ENST00000273317|LIMD1', 'ENST00000474665.1_1_3:45707185-45715939:+|nuORF'] 5880 21495 APGGHPWG True NCI_RA007_Epitope_Rep5 777.35582213613 777.3552749679301 89.748 1 -2.212959604117356 0.46198880117300806 1.0 ['ENST00000403662.7_2_22:37334948-37335272:+|nuORF'] 95434 25853 RWFYIVLVPI True NCI_RA007_Epitope_Rep5 1304.7645147089197 1304.7634099358602 106.99 2 -2.212992380781239 0.46198880117300806 1.0 ['PTPRF|p.V1136L|1|0.17|ENSG00000142949|chr1:43605545-43605545|G/T|missense_variant'] 122964 23246 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 94.4 2 -2.213121736647968 0.4619896088993721 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 64801 22487 LQCLRRDIW True PC9_epitope_Rep4 1201.6389969259699 1201.63735490379 94.727 3 -2.213347871078148 0.4619896088993721 1.0 ['ENST00000380702.6_2_19:10578104-10578401:+|nuORF'] 5646 23756 APAAGLRSVH True PC9_epitope_Rep1 977.5406627836901 977.5401149679301 96.172 1 -2.2136841051818963 0.4620165745856354 1.0 ['ENST00000487159.5_2_3:42055459-42128703:+|nuORF'] 135682 26034 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 110.47 3 -2.214180502268882 0.4620754135633918 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 53197 16718 KQEEVLRK True NCI_RA007_Epitope_Rep3 1028.5978433066398 1028.59674993586 73.585 2 -2.2145113620178916 0.46211211796075763 1.0 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 52655 24554 KLTEILELLV True PC9_epitope_Rep4 1169.72712614069 1169.7260299358602 102.93 2 -2.2145617409115697 0.46211211796075763 1.0 ['ENSG00000125633|ENST00000376300|CCDC93'] 94117 17580 RRLREFAK True NCI_RA007_Epitope_Rep3 1074.6410455312998 1074.64047496793 77.111 1 -2.2148688356924113 0.46211211796075763 1.0 ['nc|ENSG00000135205|Q8IYE0-2|CCDC146', 'ENSG00000135205|ENST00000285871|CCDC146'] 14068 6637 DRQIVQYHLEM True H1975_Epitope_Rep1 1430.6976340008998 1430.69652993586 30.583 2 -2.215086012278562 0.46211211796075763 1.0 ['ENST00000589878.5_1_19:34663659-34686187:+|nuORF'] 135559 17566 WKVGALGP True PC9_epitope_Rep4 826.4701236123799 826.46902993586 75.586 2 -2.2151890462416333 0.46211211796075763 1.0 ['ENST00000295984.7_1_3:9991698-9994018:-|nuORF'] 95174 25303 RVHVVYRRP True PC9_epitope_Rep2 1180.6941437333198 1180.69304993586 103.0 2 -2.2153381463663044 0.46211211796075763 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS2|p.T217K|1|0.53|ENSG00000087116|chr5:179272949-179272949|G/T|missense_variant'] 90167 20276 REDIKIC[Carbamidomethyl]D True PC9_epitope_Rep5 1047.5018945959 1047.5007899358602 83.042 2 -2.2153680734637358 0.46211211796075763 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant'] 113438 11254 TLSNLLRSV True PC9_epitope_Rep4 1001.58694426977 1001.58584993586 51.062 2 -2.215370471128541 0.46211211796075763 1.0 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 37385 8968 GVSPEHLEQL True H1975_Epitope_Rep2 1107.5560380643099 1107.5549499358601 39.449 2 -2.215430270825249 0.46211211796075763 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1', 'ENSG00000140326|ENST00000356231|CDAN1'] 85490 7432 QFQFRFRRWNC True NCI_RA007_Epitope_Rep4 1586.7677196797397 1586.76662993586 35.231 2 -2.2155879748855196 0.46211211796075763 1.0 ['ENSG00000115596|ENST00000233948|WNT6'] 52465 17534 KKTHYGLL True PC9_epitope_Rep6 958.5600012459398 958.55890993586 80.084 2 -2.2157640787175716 0.46211211796075763 1.0 ['ENSG00000055147|ENST00000351797|FAM114A2', 'ENST00000518735.1_1_5:153405944-153406840:-|nuORF'] 71087 7738 LYLFNWIWRYH True PC9_epitope_Rep1 1609.81940381609 1609.81774490379 34.585 3 -2.2157793294249735 0.46211211796075763 1.0 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 11117 21186 DDDFDWIISK True PC9_epitope_Rep6 1252.5611830144 1252.56008993586 94.34 2 -2.2159861271951597 0.46212024644147015 1.0 ['ENST00000306984.6_1_7:40172470-40172641:-|nuORF'] 122927 22034 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 92.135 2 -2.2161182328509694 0.46212024644147015 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 36225 13986 GVCYRMLFYF True PC9_epitope_Rep4 1297.5987719067696 1297.59766993586 61.703 2 -2.2163856701224414 0.46212024644147015 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|2.6725304530072744|0.0003248618387484|13.01|528.0|35|3|anti-sense'] 52392 15848 KKLRHLLLPSE True NCI_RA007_Epitope_Rep3 1332.82415484336 1332.8224949037901 69.972 3 -2.216627435541636 0.46212024644147015 1.0 ['ENST00000201979.2_1_20:30064033-30064156:+|nuORF'] 130451 13322 VSNVCRFWE True PC9_epitope_Rep5 1138.5229641142198 1138.52131490379 56.256 3 -2.2168466912331763 0.46212024644147015 1.0 ['nc|ENSG00000006659|Q8TCE9-2|LGALS14'] 131777 7895 VTPSRSPW True PC9_epitope_Rep4 928.4766655448 928.47556993586 37.797 2 -2.2169292275658776 0.46212024644147015 1.0 ['ENST00000289734.11_1_8:41513135-41518987:-|nuORF'] 45650 9826 IRELQQQIEDL True NCI_RA007_Epitope_Rep4 1383.73579333143 1383.7346899358602 44.644 2 -2.217070085180672 0.46212024644147015 1.0 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 80821 23863 PHPGVGLT True NCI_RA007_Epitope_Rep1 776.4180880395201 776.41698993586 98.708 2 -2.2172236136476764 0.46212595999617595 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2'] 86978 16778 QLWWRNWFWVH True PC9_epitope_Rep2 1656.8102361147198 1656.80912993586 69.784 2 -2.2176135778827546 0.4621316734295001 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 127478 13840 VNLKLGDD True NCI_RA007_Epitope_Rep5 872.4603467743199 872.45924993586 59.91 2 -2.217721589507249 0.4621373867414465 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 88357 23168 QSKFPIFRF True PC9_epitope_Rep4 1168.6393141958 1168.63820993586 97.343 2 -2.2180763791248106 0.46213819108821497 1.0 ['ENSG00000133962|ENST00000256343|CATSPERB'] 92648 6460 RNKPPLGP True PC9_epitope_Rep1 877.5133854066898 877.5122899358599 29.653 2 -2.2180997157975417 0.46213819108821497 1.0 ['ENSG00000140807|ENST00000268459|NKD1'] 126929 23240 VLRDTRPA True PC9_epitope_Rep3 926.5297637468199 926.5292149679301 94.667 1 -2.218147742656087 0.46214390414887513 1.0 ['ENSG00000167191|ENST00000300571|GPRC5B', 'nc|ENSG00000167191|Q9NZH0-2|GPRC5B'] 126142 25149 VLFASSHT True PC9_epitope_Rep5 860.43921740692 860.43812993586 101.88 2 -2.2184478780547545 0.46214961708817065 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 28624 24488 FSIFKRIIVFW True PC9_epitope_Rep1 1454.84382765878 1454.84218490379 99.037 3 -2.218816094877093 0.4621822855261341 1.0 ['ENST00000239231.6_1_5:167978076-167978319:-|nuORF'] 105723 7163 SSFAVFYFI True NCI_RA007_Epitope_Rep3 1079.53278343859 1079.5316899358602 35.292 2 -2.2188466743221453 0.4621822855261341 1.0 ['nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-2|CACNA1C'] 122934 17298 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 75.924 2 -2.219131784129881 0.46220102808105695 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 119964 15862 VDNSNCWQPY True NCI_RA007_Epitope_Rep3 1224.48697252832 1224.4858699358601 70.042 2 -2.219140646563494 0.46220102808105695 1.0 ['ENST00000420492.2_1_9:101369387-101369513:+|nuORF'] 72131 24538 MFRGSLYKR True H1975_Epitope_Rep3 1156.6175332053997 1156.6164299358602 102.12 2 -2.2192846383917137 0.46220102808105695 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 84606 4246 QDASSFRL True PC9_epitope_Rep2 922.45084471978 922.44974993586 21.662 2 -2.2197594290863933 0.46220102808105695 1.0 ['nc|ENSG00000198363|Q12797-10|ASPH', 'ENSG00000198363|ENST00000379454|ASPH'] 27147 23361 FLKNFLMLKV True PC9_epitope_Rep4 1251.74133673619 1251.73969490379 98.115 3 -2.2198143826346817 0.46220102808105695 1.0 ['ENST00000433419.2_3_17:20268846-20268972:+|nuORF'] 73564 6383 MVSMLDRDMSG True H1975_Epitope_Rep3 1240.52501491316 1240.52390993586 29.529 2 -2.219828565989629 0.46220102808105695 1.0 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF'] 125904 25054 VLAWVKKR True NCI_RA007_Epitope_Rep5 998.6389202729799 998.6378299358599 103.87 2 -2.2198596162348996 0.46220102808105695 1.0 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 61556 25524 LKIAAFNI True PC9_epitope_Rep1 888.5432885526401 888.54218993586 103.18 2 -2.2200084684391452 0.46220673980691823 1.0 ['ENSG00000213918|ENST00000246949|DNASE1'] 55977 19044 LASAISSSKKK True NCI_RA007_Epitope_Rep1 1118.66592286646 1118.66537496793 78.218 1 -2.220153273289798 0.46221816289467815 1.0 ['CXXC5|p.G256S|1|0.73|ENSG00000171604|chr5:139681289-139681289|G/A|missense_variant'] 126490 20762 VLLKLGIKPS True NCI_RA007_Epitope_Rep5 1066.7114165069 1066.7108749679298 86.836 1 -2.220247023840568 0.46221816289467815 1.0 ['ENST00000496851.6_1_6:167347386-167366008:-|nuORF', 'ENST00000499370.6_1_6:167347461-167366008:-|nuORF', 'ENST00000028008.9_1_6:167343078-167365992:-|nuORF', 'ENSG00000026297|ENST00000508775|RNASET2'] 11639 7756 DGLQQPVL True NCI_RA007_Epitope_Rep2 868.4654321547599 868.46432993586 34.797 2 -2.22058639115638 0.4622377028289865 1.0 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14', 'ENST00000474645.6_1_6:86215687-86217871:-|nuORF'] 23963 23287 EYLRQRQEL True PC9_epitope_Rep4 1233.6465844042098 1233.64492490379 97.827 3 -2.220591857836572 0.4622377028289865 1.0 ['ENSG00000165617|ENST00000395153|DACT1', 'nc|ENSG00000165617|Q9NYF0|DACT1'] 48585 25971 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 107.78 3 -2.2207544921806313 0.4622377028289865 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 126627 7685 VLNENNVPL True PC9_epitope_Rep5 1010.53965972418 1010.53856993586 34.505 2 -2.221022043194499 0.4622377028289865 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 130337 12698 VSKLPTLRSL True PC9_epitope_Rep2 1112.69174369148 1112.6906499358602 54.149 2 -2.221066892451261 0.4622377028289865 1.0 ['ENST00000415817.1_1_22:21351478-21351634:+|nuORF', 'ENST00000498649.1_1_22:21351132-21351634:+|nuORF', 'ENST00000479606.5_1_22:21333956-21351634:+|nuORF', 'ENSG00000099949|ENST00000646124|LZTR1'] 135672 25211 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 106.23 3 -2.2210759267275115 0.4622377028289865 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 11523 21494 DFLQMGPS True PC9_epitope_Rep2 893.3953039896099 893.39475496793 88.147 1 -2.221142975241839 0.4622377028289865 1.0 ['ENST00000373991.3_1_20:34542651-34542879:-|nuORF'] 18057 7652 EIFTEPAVF True NCI_RA007_Epitope_Rep1 1051.52261267771 1051.5215099358602 33.758 2 -2.221157491239717 0.4622377028289865 1.0 ['PKP2|p.R46Afs*66|1|0.45|ENSG00000057294|chr12:32896596-32896596|G/-|frameshift_variant'] 52344 18661 KKKKKVGAERN True NCI_RA007_Epitope_Rep3 1284.7990027246797 1284.7979099358602 81.64 2 -2.221165254149759 0.4622377028289865 1.0 ['ENST00000454171.1_1_7:84657519-84657798:+|nuORF'] 46322 15142 ISQKQNSKSVP True PC9_epitope_Rep2 1214.66190011518 1214.66080993586 63.503 2 -2.2212495056813997 0.46224341343754316 1.0 ['ENSG00000129315|ENST00000261900|CCNT1'] 36151 9483 GVAREHHV True PC9_epitope_Rep6 903.4674978434301 903.46640993586 46.725 2 -2.221616705351524 0.4622703621110757 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 12525 7673 DKKGCHCVI True PC9_epitope_Rep4 1001.4786567740899 1001.47754993586 36.895 2 -2.2223190667058597 0.46228178227073863 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2', 'nc|ENSG00000133818|P62070-2|RRAS2'] 101368 15393 SLKAANAA True NCI_RA007_Epitope_Rep1 744.41300265908 744.4124549679301 63.953 1 -2.2223367060393784 0.46228178227073863 1.0 ['ENSG00000204574|ENST00000326195|ABCF1', 'nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ABCF1|p.R331Afs*5|1|0.53|ENSG00000204574|chr6:30583682-30583682|C/-|frameshift_variant'] 127468 24569 VNLAVLKL True NCI_RA007_Epitope_Rep3 868.57458868092 868.57404496793 106.28 1 -2.2226086812609815 0.4622823779193206 1.0 ['GRIA3|p.S817Rfs*3|1|0.6|ENSG00000125675|chrX:123482810-123482810|C/-|frameshift_variant', 'nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3', 'ENSG00000152578|ENST00000282499|GRIA4', 'nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2', 'nc|ENSG00000155511|P42261-3|GRIA1', 'nc|ENSG00000155511|P42261-4|GRIA1', 'nc|ENSG00000155511|P42261-2|GRIA1', 'ENSG00000155511|ENST00000285900|GRIA1', 'nc|ENSG00000155511|P42261-6|GRIA1', 'nc|ENSG00000155511|P42261-5|GRIA1'] 122962 23814 VGHSAGHP True PC9_epitope_Rep4 760.36163579256 760.36052993586 100.02 2 -2.2228783581557754 0.4622823779193206 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 115358 23689 TRIVWWQQKVQ True PC9_epitope_Rep3 1470.8095674083802 1470.80791490379 96.405 3 -2.2234059814663594 0.4622823779193206 1.0 ['ENST00000497489.5_1_9:109691986-109693263:+|nuORF'] 3624 21451 AGPGKAAARA True PC9_epitope_Rep4 868.4878989348399 868.48680993586 90.699 2 -2.223554086568875 0.4622823779193206 1.0 ['ENST00000266269.9_2_22:31741867-31742074:-|nuORF'] 127476 26983 VNLKLGDD True H1975_Epitope_Rep2 872.4603467743199 872.45924993586 111.34 2 -2.2235891723692753 0.4622823779193206 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 57562 13059 LEDSIVHAR True PC9_epitope_Rep1 1038.5458077337798 1038.54470993586 55.098 2 -2.223711746683358 0.4622823779193206 1.0 ['ENST00000473429.5_1_1:110584467-110585729:+|nuORF'] 130163 16080 VSEDLVIR True PC9_epitope_Rep2 929.5181960036099 929.5176449679301 67.109 1 -2.223718927546833 0.4622823779193206 1.0 ['nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1', 'ENSG00000143337|ENST00000606911|TOR1AIP1', 'nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1', 'ENST00000524653.1_1_1:179853135-179873887:+|nuORF', 'nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1'] 3298 5661 AGFSVGFGASS True PC9_epitope_Rep2 985.4505103666098 985.44940993586 27.163 2 -2.2239039712370032 0.4622823779193206 1.0 ['CON__Q6IME9'] 95530 24364 RWRLPLTCLLL True PC9_epitope_Rep2 1382.82204666838 1382.8204049037902 99.281 3 -2.223963758745832 0.4622823779193206 1.0 ['ENSG00000140519|ENST00000268122|RHCG', 'RHCG|p.H185Qfs*114|1|0.17|ENSG00000140519|chr15:89480376-89480377|-/T|frameshift_variant'] 34237 26973 GNPTKHKTVFP True H1975_Epitope_Rep2 1224.6615061923599 1224.6604099358601 111.3 2 -2.223968300969989 0.4622823779193206 1.0 ['ENST00000518781.1_1_8:67351545-67351743:+|nuORF'] 122939 22755 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 98.932 2 -2.2243385680667402 0.4622823779193206 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 113334 20884 TLRPQFEAKYY True PC9_epitope_Rep2 1414.7245003717399 1414.7234099358602 85.773 2 -2.2245840968973067 0.4622823779193206 1.0 ['nc|ENSG00000134343|Q9BYT9-2|ANO3', 'ANO3|p.Y843Lfs*12|1|0.08|ENSG00000134343|chr11:26647808-26647808|A/-|frameshift_variant', 'ENSG00000134343|ENST00000256737|ANO3'] 45177 25529 IPQKTLLLHL True PC9_epitope_Rep3 1174.74377926434 1174.7426899358602 103.67 2 -2.2246228845461746 0.4622823779193206 1.0 ['nc|ENSG00000178177|Q8N3X6|LCORL'] 114457 12670 TPVSLPPPCP True NCI_RA007_Epitope_Rep4 1006.51575347546 1006.51464993586 55.774 2 -2.224731221406951 0.4622823779193206 1.0 ['ENST00000487620.1_1_7:99668768-99673049:-|nuORF'] 49135 22305 KEKVIIWKI True PC9_epitope_Rep1 1155.73796560791 1155.73633490379 90.609 3 -2.224797982011347 0.4622823779193206 1.0 ['NUP133|p.L123V|1|0.48|ENSG00000069248|chr1:229502037-229502037|G/C|missense_variant'] 110497 23622 TFGIGSMY True H1975_Epitope_Rep1 874.38949033318 874.38838993586 98.097 2 -2.224958113494952 0.4622823779193206 1.0 ['ENST00000475374.5_1_X:78207773-78207827:+|nuORF'] 101083 13587 SLGHAAAA True NCI_RA007_Epitope_Rep4 696.3554877829599 696.35493496793 59.469 1 -2.2251045167230634 0.4622823779193206 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 45008 12844 IPDVEISRN True NCI_RA007_Epitope_Rep4 1041.54547338061 1041.54436993586 56.486 2 -2.2251379792243573 0.4622823779193206 1.0 ['MADD|p.K1006N|1|0.25|ENSG00000110514|chr11:47290163-47290163|G/T|missense_variant'] 48580 25355 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 105.03 3 -2.2253575557188867 0.4622823779193206 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 124101 9775 VGSPFKAK True H1975_Epitope_Rep1 832.48068829608 832.47958993586 42.528 2 -2.225470932283361 0.4622823779193206 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 44286 22131 ILCYLLLVRF True PC9_epitope_Rep6 1251.7413367361899 1251.74022993586 98.068 2 -2.22555207964221 0.4622823779193206 1.0 ['ENSG00000182631|ENST00000330120|RXFP3'] 113899 23478 TNQKIRKT True PC9_epitope_Rep1 987.58252759567 987.58142993586 95.093 2 -2.225603282138475 0.4622823779193206 1.0 ['nc|ENSG00000127054|Q5TA45-2|INTS11', 'nc|ENSG00000127054|Q5TA45-4|INTS11', 'nc|ENSG00000127054|Q5TA45-3|INTS11', 'ENSG00000127054|ENST00000435064|INTS11', 'nc|ENSG00000127054|Q5TA45-5|INTS11', 'ENST00000478641.5_1_1:1248876-1249468:-|nuORF', 'ENST00000470030.6_1_1:1248876-1250311:-|nuORF'] 122968 21197 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 94.382 2 -2.2256984781662865 0.4622823779193206 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 94757 25631 RSKRKGSA True PC9_epitope_Rep5 888.5253470727198 888.52424993586 103.92 2 -2.225702351974835 0.4622823779193206 1.0 ['nc|ENSG00000165304|Q14680-3|MELK', 'nc|ENSG00000165304|Q14680-4|MELK', 'nc|ENSG00000165304|Q14680-5|MELK', 'nc|ENSG00000165304|Q14680-2|MELK', 'nc|ENSG00000165304|Q14680-8|MELK', 'nc|ENSG00000165304|Q14680-7|MELK', 'nc|ENSG00000165304|Q14680-6|MELK', 'ENSG00000165304|ENST00000298048|MELK'] 101082 13267 SLGHAAAA True NCI_RA007_Epitope_Rep3 696.3554877829599 696.35493496793 59.459 1 -2.225790259162077 0.4622823779193206 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 6111 8558 APMPDIQVY True PC9_epitope_Rep4 1032.49501803088 1032.49392993586 40.399 2 -2.225871647963473 0.4622823779193206 1.0 ['nc|ENSG00000240268|A6NHM9|MOXD2P'] 135679 25752 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 109.03 3 -2.22596901949043 0.4622823779193206 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 23847 8182 EYINRSLNDLV True NCI_RA007_Epitope_Rep4 1334.68302948258 1334.6819299358601 38.259 2 -2.2260819422720908 0.4622823779193206 1.0 ['ENSG00000178750|ENST00000315099|STX19'] 29824 24778 FVRLLLEQ True NCI_RA007_Epitope_Rep1 1016.6018660579198 1016.60076993586 102.58 2 -2.2261723182563715 0.46228317870108915 1.0 ['ENSG00000230778|ENST00000434396|ANKRD63'] 83461 20034 PTPPGFLG True H1975_Epitope_Rep1 784.41194002992 784.41084993586 83.375 2 -2.2261835132028223 0.46228317870108915 1.0 ['RAPGEF6|p.Y1511F|1|0.13|ENSG00000158987|chr5:131429150-131429150|T/A|missense_variant'] 132810 5371 VVLAKANS True NCI_RA007_Epitope_Rep3 800.47560291564 800.4745099358599 28.134 2 -2.226219011143492 0.46228888676581426 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB'] 86571 10214 QLEAPAKK True H1975_Epitope_Rep1 883.5127167003499 883.5121649679301 44.23 1 -2.2273234246080578 0.46237049932065216 1.0 ['ENSG00000158163|ENST00000327532|DZIP1L'] 54160 23268 KVRFKKVEF True H1975_Epitope_Rep3 1179.7128134892298 1179.7111649037902 97.145 3 -2.227402067161739 0.46237049932065216 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49'] 135297 25204 WFWKLVPARYR True PC9_epitope_Rep1 1520.8404736138398 1520.83936993586 101.83 2 -2.227617398527617 0.46237049932065216 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 110743 11306 TGGGGGGD True NCI_RA007_Epitope_Rep4 576.21396849936 576.2134249679301 50.384 1 -2.227797631460325 0.46237049932065216 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 135676 25553 WLPTMRNLF True NCI_RA007_Epitope_Rep2 1176.6113851958 1176.60973490379 107.97 3 -2.2279068183974027 0.46237049932065216 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 6198 24173 APNTQRKP True PC9_epitope_Rep2 910.4984636185399 910.49791496793 98.507 1 -2.2279743360262945 0.4623712981636769 1.0 ['ENSG00000111254|ENST00000228850|AKAP3'] 49685 22049 KGPNAIKPNPR True PC9_epitope_Rep6 1190.68838964654 1190.6867549037902 97.746 3 -2.2279852939530453 0.4623712981636769 1.0 ['ENST00000510762.1_1_4:57244622-57253600:-|nuORF'] 61744 22774 LLAFAKNL True NCI_RA007_Epitope_Rep2 888.54328855264 888.54218993586 94.836 2 -2.2281881823173446 0.4623770048083557 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 101917 18562 SLPTWGKV True PC9_epitope_Rep6 886.4912529797799 886.49070496793 84.038 1 -2.2282582924528 0.4623941240155391 1.0 ['IGSF5|p.T332Kfs*74|1|0.12|ENSG00000183067|chr21:39792043-39792046|AGAC/-|frameshift_variant', 'ENSG00000183067|ENST00000380588|IGSF5'] 80877 23444 PHTTHSPP True H1975_Epitope_Rep2 872.41406528824 872.41296993586 96.648 2 -2.2283018607988527 0.4623941240155391 1.0 ['ENSG00000184956|ENST00000421673|MUC6'] 9780 18297 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 80.13 2 -2.2283849919236323 0.4623941240155391 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 39793 16827 HMHGLAFL True NCI_RA007_Epitope_Rep3 924.4639926861199 924.46288993586 74.061 2 -2.2287471198470583 0.46239983017566205 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 38631 21860 HFGFILLM True PC9_epitope_Rep6 976.52044493308 976.51934993586 96.986 2 -2.2288139701156573 0.4624006283367121 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 120096 4940 VDVYFETSA True PC9_epitope_Rep1 1029.4654917244097 1029.46438993586 23.864 2 -2.2289671376835516 0.4624006283367121 1.0 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'nc|ENSG00000084234|Q06481-6|APLP2'] 117756 21108 TVVKDLWP True PC9_epitope_Rep1 956.5331177917599 956.53256496793 86.019 1 -2.2293154669496333 0.46242756161243076 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A'] 127942 17561 VPGYQGVN True H1975_Epitope_Rep3 832.4079172786398 832.40682993586 73.338 2 -2.229535229936774 0.46242835915941416 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2', 'NOTCH2|p.E1495*|1|0.11|ENSG00000134250|chr1:119925333-119925334|-/A|frameshift_variant', 'ENST00000478864.1_1_1:120478044-120480072:-|nuORF'] 104659 17216 SQTHLKRL True NCI_RA007_Epitope_Rep4 981.57196291197 981.57086993586 74.534 2 -2.229579953431897 0.46242835915941416 1.0 ['ENST00000501122.2_1_11:65197707-65198040:+|nuORF'] 129359 25600 VRAVLRVPSA True NCI_RA007_Epitope_Rep1 1066.66111226954 1066.6600099358602 105.95 2 -2.2297249126953336 0.4624552912832596 1.0 ['ENSG00000196832|ENST00000641879|OR11G2', 'nc|ENSG00000196832|Q8NGC1|OR11G2'] 97148 23150 SDRDSGSN True H1975_Epitope_Rep1 836.32603812948 836.32548496793 96.249 1 -2.230042180812707 0.46247731445613066 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13'] 82688 20191 PQRRRDLKL True NCI_RA007_Epitope_Rep4 1180.7152731007197 1180.7141699358601 87.366 2 -2.2302874939423334 0.46247731445613066 1.0 ['ENST00000354050.8_2_20:44527440-44527479:-|nuORF'] 124227 13216 VGTFNIIV True NCI_RA007_Epitope_Rep4 861.4960040070499 861.49490993586 57.961 2 -2.2303530565985534 0.4624781109047493 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant', 'ENST00000532739.1_1_16:16459039-16460653:+|nuORF'] 63546 25288 LMCSVPGY True PC9_epitope_Rep2 868.3822967777598 868.38118993586 102.94 2 -2.2304067204000044 0.4624781109047493 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 122310 6483 VGCCCQNY True NCI_RA007_Epitope_Rep5 888.2928301503598 888.29172993586 31.603 2 -2.2307099848416394 0.46251565385350113 1.0 ['ENST00000347770.8_1_8:103862280-103870277:-|nuORF'] 91959 16991 RKPGAGRT True H1975_Epitope_Rep2 841.48823328801 841.48712993586 70.605 2 -2.230970623223877 0.46253276592131937 1.0 ['ENSG00000112041|ENST00000229771|TULP1'] 53119 23354 KPTKAARQ True PC9_epitope_Rep1 898.5348491272598 898.53374993586 94.617 2 -2.2309829066052735 0.46253276592131937 1.0 ['ENSG00000183921|ENST00000602312|SDR42E2'] 73264 21478 MSFTVLHV True H1975_Epitope_Rep3 932.47897404392 932.47786993586 89.755 2 -2.231077223764042 0.46253276592131937 1.0 ['ENST00000265689.8_1_11:67820608-67820851:-|nuORF'] 10283 24624 CCLLVCVL True H1975_Epitope_Rep1 864.4271387952 864.42604993586 102.03 2 -2.2313796693016408 0.46254496832319886 1.0 ['UCN3|p.A140Gfs*?|1|0.25|ENSG00000178473|chr10:5374134-5374135|-/A|frameshift_variant'] 132631 24945 VVFLIVPM True PC9_epitope_Rep5 916.54559705176 916.54448993586 101.13 2 -2.2318425643797486 0.46254496832319886 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 10443 8894 CHRYSRRRRSR True PC9_epitope_Rep1 1531.8127128095498 1531.8110549037901 39.05 3 -2.231870920435326 0.46254496832319886 1.0 ['nc|ENSG00000115875|Q16629-3|SRSF7', 'nc|ENSG00000115875|Q16629-2|SRSF7', 'nc|ENSG00000115875|Q16629-4|SRSF7', 'ENSG00000115875|ENST00000313117|SRSF7'] 94866 25478 RSYKQKKK True PC9_epitope_Rep2 1064.6454622054 1064.6443699358601 103.68 2 -2.2320016121041077 0.46254496832319886 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 89711 21223 RAAKTVAH True PC9_epitope_Rep3 852.49298431528 852.49188993586 86.923 2 -2.2324736160491554 0.46256207818668027 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 124228 13373 VGTFNIIV True NCI_RA007_Epitope_Rep5 861.4960040070499 861.49490993586 58.127 2 -2.232521393626003 0.46256207818668027 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant', 'ENST00000532739.1_1_16:16459039-16460653:+|nuORF'] 105521 21140 SSAKKKGG True PC9_epitope_Rep2 761.4395517600899 761.43844993586 86.769 2 -2.2325256973183545 0.46256207818668027 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11', 'nc|ENSG00000144048|O75319-2|DUSP11'] 98868 18559 SGVGKWGP True H1975_Epitope_Rep1 786.4024379753798 786.40134993586 77.374 2 -2.2328525105796677 0.4626208389486083 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 75660 2607 NLGDPGARAVS True PC9_epitope_Rep2 1055.5359713260698 1055.5348699358601 14.689 2 -2.2329784729304376 0.46263715274093253 1.0 ['DDR1|p.R330G|1|0.28|ENSG00000204580|chr6:30892431-30892431|A/G|missense_variant'] 127509 22768 VNLRSINK True PC9_epitope_Rep5 942.5610638751 942.55996993586 92.572 2 -2.2332494613748537 0.46264428789679174 1.0 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS', 'nc|ENSG00000188158|Q6T4R5-4|NHS', 'nc|ENSG00000188158|Q6T4R5-3|NHS'] 117402 14917 TVPPHGGP True NCI_RA007_Epitope_Rep4 760.3867879112399 760.38623496793 64.841 1 -2.2334504671921076 0.46264428789679174 1.0 ['HEPH|p.A525G|1|0.3|ENSG00000089472|chrX:66197755-66197755|C/G|missense_variant'] 10627 19491 CNYDGGDC True NCI_RA007_Epitope_Rep4 845.23200371561 845.2314549679301 84.236 1 -2.2335633042033716 0.46264428789679174 1.0 ['ENSG00000182752|ENST00000328252|PAPPA', 'ENST00000483254.1_1_9:119135964-119158892:+|nuORF'] 73874 18081 NATKTKLKQ True NCI_RA007_Epitope_Rep4 1030.61349337078 1030.6123899358602 78.239 2 -2.233598408052044 0.46264428789679174 1.0 ['nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'ENSG00000163104|ENST00000354268|SMARCAD1'] 37946 5979 HAAPPSNP True PC9_epitope_Rep3 789.3769515035301 789.37584993586 28.054 2 -2.2336214345498147 0.46264428789679174 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 75292 24018 NIKEVGLA True NCI_RA007_Epitope_Rep5 842.4861675993399 842.48506993586 99.78 2 -2.2338784788878208 0.46264428789679174 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 32747 6092 GHAKSSFG True PC9_epitope_Rep5 789.37695150353 789.37584993586 28.422 2 -2.2339627943952336 0.46264428789679174 1.0 ['ENST00000509911.2_1_9:37007519-37007720:+|nuORF'] 89708 15071 RAAKTVAH True NCI_RA007_Epitope_Rep3 852.49298431528 852.49188993586 66.763 2 -2.234010125951782 0.46264428789679174 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 49136 23325 KEKVIIWKI True PC9_epitope_Rep1 1155.73796560791 1155.73633490379 94.51 3 -2.234011871289976 0.46264428789679174 1.0 ['NUP133|p.L123V|1|0.48|ENSG00000069248|chr1:229502037-229502037|G/C|missense_variant'] 6217 22961 APPIHMVP True PC9_epitope_Rep5 860.45784467652 860.45729496793 93.309 1 -2.2342418009481104 0.46264428789679174 1.0 ['ENST00000263857.10_1_2:86252617-86252839:-|nuORF'] 72201 21158 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 88.408 2 -2.2344876311560653 0.46264428789679174 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 31127 7477 GAVQLPQQ True PC9_epitope_Rep4 839.45011644379 839.44900993586 36.119 2 -2.2344965864811317 0.46264428789679174 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'NAV3|p.T1393Pfs*9|1|0.09|ENSG00000067798|chr12:78122363-78122373|AGGCACTCACG/-|frameshift_variant', 'NAV3|p.P1503Qfs*97|1|0.24|ENSG00000067798|chr12:78137241-78137241|C/-|frameshift_variant', 'NAV3|p.R1152Efs*27|1|0.47|ENSG00000067798|chr12:78119649-78119649|C/-|frameshift_variant', 'ENST00000550673.1_1_12:78401028-78404660:+|nuORF', 'NAV3|p.S830Vfs*12|1|0.34|ENSG00000067798|chr12:78051116-78051116|A/-|frameshift_variant'] 82106 22617 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 94.177 2 -2.2347448686761227 0.46264428789679174 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 13514 24675 DNNNGWDS True H1975_Epitope_Rep2 920.32603812948 920.32494993586 101.47 2 -2.2347895414680585 0.46264428789679174 1.0 ['ENSG00000169605|ENST00000377938|GKN1'] 44714 24654 ILVLQRHFQQ True H1975_Epitope_Rep2 1280.73533983896 1280.7342499358601 101.39 2 -2.234796993648823 0.46264428789679174 1.0 ['ENST00000397885.2_1_9:2837287-2844066:-|nuORF'] 91694 25582 RKAFKRAT True PC9_epitope_Rep2 976.5930327097199 976.5924849679301 104.09 1 -2.23483805803122 0.46264428789679174 1.0 ['nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'ENST00000543926.6_1_18:74647944-74680292:+|nuORF'] 10339 22022 CFPHSTMF True H1975_Epitope_Rep1 968.38844478736 968.38734993586 91.602 2 -2.234850139776667 0.46264428789679174 1.0 ['ENST00000557778.1_1_14:102100909-102101767:-|nuORF'] 80251 19650 PGASSWPP True H1975_Epitope_Rep2 797.37080349393 797.36970993586 81.53 2 -2.2348849417627843 0.46264428789679174 1.0 ['ENST00000534127.5_1_11:8752243-8752675:-|nuORF'] 56474 16652 LDERANLPEI True PC9_epitope_Rep4 1168.6088019131598 1168.6077099358602 72.017 2 -2.235040870834523 0.4626515738216229 1.0 ['ENST00000587908.1_1_19:56832840-56833431:-|nuORF'] 138065 12150 YGEPRKLL True H1975_Epitope_Rep2 974.5549158654999 974.55380993586 51.82 2 -2.235069854003911 0.4626515738216229 1.0 ['ENSG00000198681|ENST00000356661|MAGEA1'] 86251 17665 QIPMWSQRV True PC9_epitope_Rep6 1143.58589872395 1143.5848099358602 80.587 2 -2.235386286119704 0.4626515738216229 1.0 ['KCNT2|p.I629Mfs*5|1|0.2|ENSG00000162687|chr1:196333957-196333957|A/-|frameshift_variant', 'KCNT2|p.S950Lfs*28|1|0.58|ENSG00000162687|chr1:196280921-196280921|G/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2', 'ENST00000498426.5_1_1:196286396-196434478:-|nuORF'] 65591 20023 LRVKHLMLLHY True NCI_RA007_Epitope_Rep4 1421.83294570525 1421.83129490379 86.591 3 -2.235556916059621 0.4626515738216229 1.0 ['ENSG00000196329|ENST00000358647|GIMAP5', 'nc|ENSG00000196329|Q96F15-2|GIMAP5'] 92227 23202 RLKAGHGG True PC9_epitope_Rep4 794.4511195032999 794.45002993586 97.475 2 -2.2356507909296246 0.4626515738216229 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 127244 15029 VLYCCCLKEI True PC9_epitope_Rep6 1185.55960951673 1185.55850993586 69.836 2 -2.2356759524209395 0.4626523662518698 1.0 ['ENSG00000088035|ENST00000263440|ALG6'] 40096 26896 HPVMGLIY True H1975_Epitope_Rep2 928.4840594243599 928.48296993586 110.96 2 -2.2358828485825915 0.4626523662518698 1.0 ['LRP5|p.M473I|1|0.18|ENSG00000162337|chr11:68389887-68389887|G/T|missense_variant'] 95524 22888 RWRLHSIQK True PC9_epitope_Rep2 1222.7047084170201 1222.7036099358602 93.538 2 -2.2362996503525356 0.46266376703972845 1.0 ['ENST00000482389.1_1_7:96318216-96318261:-|nuORF'] 3016 8745 AFLWIQRELRR True PC9_epitope_Rep1 1486.8521009267 1486.85100993586 38.476 2 -2.2363655494677346 0.46266376703972845 1.0 ['ENST00000494154.6_1_3:40523714-40523816:+|nuORF'] 20104 7921 EMMRQQGTLS True NCI_RA007_Epitope_Rep3 1179.53762820219 1179.53599490379 38.268 3 -2.236371657282117 0.462664559177655 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-2|DNAH6'] 100349 7617 SKPPYSFSL True NCI_RA007_Epitope_Rep3 1024.52294703088 1024.52184993586 37.09 2 -2.236600849648219 0.462664559177655 1.0 ['nc|ENSG00000170802|P32314-2|FOXN2', 'ENSG00000170802|ENST00000340553|FOXN2'] 30559 12375 GAHACARA True H1975_Epitope_Rep2 755.34969120987 755.3491449679301 52.687 1 -2.2376278187030443 0.4626832424634576 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 35321 15298 GRQVCADP True NCI_RA007_Epitope_Rep5 844.3861362882399 844.38502993586 65.54 2 -2.2380559863680514 0.4626832424634576 1.0 ['ENSG00000276085|ENST00000619989|CCL3L3'] 113965 21757 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 89.997 2 -2.2381195490294497 0.4626832424634576 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 7120 23207 AQVRGGMV True PC9_epitope_Rep4 816.4276071773999 816.4265099358599 97.494 2 -2.2382767468798757 0.4626832424634576 1.0 ['nc|ENSG00000086205|Q04609-6|FOLH1', 'nc|ENSG00000086205|Q04609-3|FOLH1', 'nc|ENSG00000086205|Q04609-9|FOLH1', 'nc|ENSG00000086205|Q04609-8|FOLH1', 'nc|ENSG00000086205|Q04609-7|FOLH1', 'ENSG00000086205|ENST00000256999|FOLH1', 'nc|ENSG00000086205|Q04609-10|FOLH1', 'nc|ENSG00000290503|Q9HBA9|FOLH1B', 'ENST00000529567.5_1_11:89372457-89431764:+|nuORF'] 89164 23677 QVRGPLHLR True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 95.865 2 -2.2384419344733906 0.4626832424634576 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 40921 25374 HSRQVLLLQ True PC9_epitope_Rep2 1092.64037682496 1092.63926993586 103.28 2 -2.2385493690552174 0.4626832424634576 1.0 ['ENSG00000139211|ENST00000550413|AMIGO2'] 15668 22888 EATQRITTR True PC9_epitope_Rep1 1074.57817049122 1074.5770699358602 92.834 2 -2.2386290284860855 0.4626832424634576 1.0 ['ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG', 'ENST00000492833.5_1_21:39767491-39817511:-|nuORF', 'nc|ENSG00000157554|P11308-5|ERG', 'nc|ENSG00000157554|P11308-6|ERG', 'ENST00000468474.5_1_21:39772286-39947633:-|nuORF'] 29095 19360 FTKEDALK True PC9_epitope_Rep2 950.5072969667398 950.5067449679301 79.844 1 -2.2387024217267397 0.46268894192521876 1.0 ['nc|ENSG00000110435|O00330-3|PDHX', 'ENSG00000110435|ENST00000227868|PDHX'] 84682 14958 QDKSVVNK True NCI_RA007_Epitope_Rep3 916.4977949122 916.49668993586 66.278 2 -2.238882476819976 0.46270603958505696 1.0 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 124162 17111 VGSSTTRL True PC9_epitope_Rep4 819.44503106335 819.44392993586 73.821 2 -2.2389024586907524 0.46270603958505696 1.0 ['ENST00000448022.1_1_7:114563557-114563668:+|nuORF'] 74089 23684 NDQVRFELSCY True H1975_Epitope_Rep1 1372.6081502901598 1372.60704993586 98.334 2 -2.2389653724871987 0.46270603958505696 1.0 ['ENSG00000130707|ENST00000352480|ASS1', 'ENST00000467695.5_1_9:133333919-133355188:+|nuORF', 'ASS1|p.I268Sfs*52|1|0.08|ENSG00000130707|chr9:130480413-130480414|-/G|frameshift_variant'] 124236 12517 VGTGGLGK True NCI_RA007_Epitope_Rep2 687.39153893851 687.39099496793 53.3 1 -2.2392636414619913 0.46271901913368124 1.0 ['ENST00000525308.1_1_8:145138262-145138586:+|nuORF', 'ENST00000532758.5_1_8:145137633-145138586:+|nuORF'] 61192 14839 LILGTLESGH True PC9_epitope_Rep1 1038.57095985246 1038.5703749679299 61.897 1 -2.2394269209664763 0.46271901913368124 1.0 ['SIGLEC8|p.L302Cfs*19|1|0.25|ENSG00000105366|chr19:51455565-51455565|G/-|frameshift_variant', 'nc|ENSG00000105366|Q9NYZ4-3|SIGLEC8', 'ENSG00000105366|ENST00000321424|SIGLEC8'] 142094 8510 YVNVQPQPQ True PC9_epitope_Rep4 1071.53490869691 1071.53380993586 40.209 2 -2.239429407976664 0.46271901913368124 1.0 ['nc|ENSG00000160446|Q96GR4-2|ZDHHC12', 'ENST00000467312.1_1_9:131483560-131485040:-|nuORF', 'ENSG00000160446|ENST00000372663|ZDHHC12', 'nc|ENSG00000160446|Q96GR4-3|ZDHHC12'] 90164 20353 REDIKIC[Carbamidomethyl]D True PC9_epitope_Rep1 1047.5018945959 1047.5007899358602 83.118 2 -2.2395364395839965 0.46271901913368124 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant'] 78770 23772 PAALLGWRRRL True NCI_RA007_Epitope_Rep1 1307.79385777459 1307.7927699358602 98.228 2 -2.2399851200294476 0.46271901913368124 1.0 ['ENST00000579727.5_1_17:38498669-38498957:+|nuORF', 'ENST00000394081.7_1_17:38498669-38498969:+|nuORF'] 48610 26651 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 109.81 3 -2.240123124534009 0.46271901913368124 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 36944 20363 GVLVASSHKGC True NCI_RA007_Epitope_Rep5 1056.5386141783601 1056.53750993586 85.263 2 -2.240827527545778 0.4627475103140345 1.0 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1', 'ENST00000581967.1_1_17:8136173-8137964:-|nuORF'] 82318 16391 PPIMLIGH True NCI_RA007_Epitope_Rep4 876.4891448047999 876.48804993586 71.051 2 -2.2408490747914107 0.4627475103140345 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 90023 24586 RDRLKLGKP True PC9_epitope_Rep4 1081.6720113064098 1081.6709099358602 103.06 2 -2.241175896485399 0.4627475103140345 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'KDR|p.P1105Mfs*9|1|0.13|ENSG00000128052|chr4:55089466-55089467|-/CCTTCTTCATT|frameshift_variant', 'KDR|p.P1233Lfs*2|1|0.16|ENSG00000128052|chr4:55082602-55082602|C/-|frameshift_variant'] 72196 18940 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 79.692 2 -2.2412988025481773 0.4627475103140345 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 27418 5039 FLWYFYRDPET True NCI_RA007_Epitope_Rep1 1535.7085159544295 1535.7074099358601 23.686 2 -2.24134537448047 0.4627475103140345 1.0 ['nc|ENSG00000171044|Q5GH73-2|XKR6', 'XKR6|p.L584Sfs*19|1|0.21|ENSG00000171044|chr8:10898132-10898132|C/-|frameshift_variant', 'ENSG00000171044|ENST00000416569|XKR6'] 49498 19068 KFGASRAA True H1975_Epitope_Rep2 806.43988611326 806.43878993586 79.155 2 -2.2415140874404567 0.46275320818750665 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 79092 23661 PALLVLLFC True PC9_epitope_Rep4 987.5827108364699 987.58160993586 99.357 2 -2.2417984529148693 0.4627547882155811 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.Q116Nfs*29|1|0.28|ENSG00000126259|chr19:35858540-35858540|C/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 60860 23463 LHVWPILMKK True H1975_Epitope_Rep3 1263.75257012623 1263.75146993586 97.92 2 -2.2421995894496627 0.4627547882155811 1.0 ['ENST00000231572.7_1_5:167943936-167944917:+|nuORF'] 100291 23719 SKEKKVVK True NCI_RA007_Epitope_Rep3 944.6018660579199 944.60076993586 102.83 2 -2.242376118148124 0.4627547882155811 1.0 ['ENSG00000135837|ENST00000367607|CEP350', 'CEP350|p.A891Yfs*19|1|0.06|ENSG00000135837|chr1:180020444-180020445|-/TATATTG|frameshift_variant'] 94252 23257 RRQRQRQW True PC9_epitope_Rep4 1212.6700542437998 1212.6689499358602 97.709 2 -2.242689259777588 0.4627547882155811 1.0 ['ENST00000247706.3_1_19:17411946-17414055:-|nuORF'] 10340 21911 CFPHSTMF True H1975_Epitope_Rep3 968.38844478736 968.38734993586 91.6 2 -2.2430327147579203 0.4627710907259134 1.0 ['ENST00000557778.1_1_14:102100909-102101767:-|nuORF'] 21936 7462 ESDYVAFK True H1975_Epitope_Rep2 957.4443623570099 957.44326993586 33.65 2 -2.2431202869668714 0.4627832744779902 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'KLHL7-DNAH11|1|fusion'] 126623 7693 VLNENNVPL True PC9_epitope_Rep1 1010.53965972418 1010.53856993586 34.413 2 -2.243441706342487 0.4627832744779902 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 140584 25356 YRQRRKLIA True PC9_epitope_Rep2 1202.7360085453 1202.73490993586 103.21 2 -2.243579070606086 0.4627832744779902 1.0 ['ENST00000469226.1_1_11:2189094-2189913:-|nuORF', 'ENST00000381168.7_1_11:2187868-2190906:-|nuORF', 'nc|ENSG00000180176|P07101-6|TH', 'nc|ENSG00000180176|P07101-5|TH', 'ENSG00000180176|ENST00000352909|TH', 'nc|ENSG00000180176|P07101-4|TH', 'nc|ENSG00000180176|P07101-2|TH', 'nc|ENSG00000180176|P07101|TH'] 124495 20665 VGVPGAGV True H1975_Epitope_Rep1 654.37007521794 654.36952496793 85.905 1 -2.243628065731379 0.4627832744779902 1.0 ['EIF4H-ELN|2|fusion', 'EIF4H-ELN|8|fusion', 'EIF4H-ELN|10|fusion', 'EIF4H-ELN|6|fusion', 'EIF4H-ELN|9|fusion', 'EIF4H-ELN|5|fusion', 'EIF4H-ELN|1|fusion', 'EIF4H-ELN|7|fusion', 'EIF4H-ELN|4|fusion', 'EIF4H-ELN|3|fusion', 'nc|ENSG00000049540|P15502-5|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-12|ELN'] 82212 25628 PPAFAKAK True NCI_RA007_Epitope_Rep5 828.4857736765199 828.4852249679301 106.12 1 -2.243942426583141 0.46279957582184517 1.0 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 55026 24657 KYRYLPERP True NCI_RA007_Epitope_Rep5 1220.6665915728 1220.66548993586 102.33 2 -2.244443057238428 0.46280527247855274 1.0 ['ENSG00000146373|ENST00000521654|RNF217', 'nc|ENSG00000146373|Q8TC41-2|RNF217'] 24392 24102 FAALKQFA True NCI_RA007_Epitope_Rep2 894.4963383602199 894.49524993586 101.25 2 -2.2445897537446853 0.46281096901444296 1.0 ['ENSG00000215045|ENST00000457091|GRID2IP'] 125220 23180 VIILKYVP True NCI_RA007_Epitope_Rep3 943.6106398364699 943.6100949679301 100.68 1 -2.245487459366301 0.4628166654295197 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|326|3|anti-sense'] 37706 9133 GVYPGMQN True NCI_RA007_Epitope_Rep2 864.3799882786401 864.37943496793 40.131 1 -2.245759914246837 0.46282393858421345 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7', 'nc|ENSG00000171316|Q9P2D1-4|CHD7', 'nc|ENSG00000171316|Q9P2D1-3|CHD7'] 63699 22255 LMWIIKHF True NCI_RA007_Epitope_Rep2 1086.60484326338 1086.6037499358602 92.424 2 -2.2459569253276808 0.46282393858421345 1.0 ['ENST00000518667.1_1_8:66643803-66660021:-|nuORF'] 21461 13436 ERKYYYYERHR True H1975_Epitope_Rep3 1661.80627293309 1661.80516993586 56.952 2 -2.2459796665749403 0.46282393858421345 1.0 ['nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 62299 8221 LLFYESDW True PC9_epitope_Rep5 1071.4913125494297 1071.49020993586 36.561 2 -2.246346697193087 0.46282393858421345 1.0 ['ENST00000517439.1_1_8:74893396-74893462:+|nuORF'] 135599 23137 WLFRILQLL True PC9_epitope_Rep3 1200.7382999610797 1200.73666490379 94.264 3 -2.2465480673408176 0.46282393858421345 1.0 ['nc|ENSG00000059122|Q4VC44-3|FLYWCH1', 'ENST00000575604.1_1_16:2983808-2987136:+|nuORF'] 121237 11765 VETDQRKM-[Oxidation] True NCI_RA007_Epitope_Rep2 1021.4862446327699 1021.4856749679301 50.361 1 -2.2467564863680614 0.4628247269642668 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 118357 5086 TYNGATSVMS True PC9_epitope_Rep6 1029.44371073401 1029.4426099358602 27.232 2 -2.2469129280789124 0.4628247269642668 1.0 ['nc|ENSG00000134873|P78369-3|CLDN10', 'nc|ENSG00000134873|P78369-2|CLDN10', 'ENSG00000134873|ENST00000299339|CLDN10'] 39647 16720 HLPHFISS True NCI_RA007_Epitope_Rep4 936.48175092524 936.48064993586 72.497 2 -2.2473198830865924 0.46283611841547206 1.0 ['ENST00000583268.1_1_17:38412646-38433335:+|nuORF'] 69877 13060 LVIDNVTRFDS True PC9_epitope_Rep4 1277.66156576201 1277.6604699358602 58.129 2 -2.2475974376946244 0.46283611841547206 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 128873 9174 VQEILRDL True PC9_epitope_Rep4 984.5603951687599 984.55928993586 42.883 2 -2.247852099714298 0.46284750938354857 1.0 ['nc|ENSG00000108852|Q14168-6|MPP2', 'nc|ENSG00000108852|Q14168-2|MPP2', 'nc|ENSG00000108852|Q14168-3|MPP2', 'nc|ENSG00000108852|Q14168|MPP2', 'nc|ENSG00000108852|Q14168-4|MPP2', 'ENST00000520319.1_1_17:41960558-41984643:-|nuORF', 'ENSG00000108852|ENST00000269095|MPP2'] 61690 18786 LKVRYRER True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 82.158 2 -2.247893426288676 0.46284750938354857 1.0 ['ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 137984 23373 YFPLFWSKCV True PC9_epitope_Rep4 1288.6314519340401 1288.63034993586 98.16 2 -2.2484721229847136 0.4628759846902533 1.0 ['ENST00000377258.5_1_1:9937984-9953219:-|nuORF'] 86344 6122 QKAARIGG True PC9_epitope_Rep3 799.4664352142698 799.46532993586 28.596 2 -2.2485238518045327 0.4628759846902533 1.0 ['ENST00000551745.1_1_12:81568635-81593297:+|nuORF'] 25890 19112 FFLIFIGRLV True NCI_RA007_Epitope_Rep5 1223.74305098835 1223.74194993586 80.385 2 -2.2485485266911724 0.4628759846902533 1.0 ['ENST00000609590.1_1_6:167417170-167417329:+|nuORF'] 82325 20270 PPIMLIGH True PC9_epitope_Rep6 876.4891448047999 876.48804993586 90.661 2 -2.248693070291655 0.4628759846902533 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 127237 24901 VLWSRNRL True NCI_RA007_Epitope_Rep1 1042.60359739342 1042.60250993586 103.06 2 -2.248878422833436 0.4628759846902533 1.0 ['ENST00000517465.1_1_8:103270587-103274193:-|nuORF'] 82266 26101 PPGFLHCA True PC9_epitope_Rep5 840.39524441996 840.39414993586 106.04 2 -2.248948707656616 0.4628922815945717 1.0 ['ENSG00000168509|ENST00000336751|HJV', 'nc|ENSG00000168509|Q6ZVN8-2|HJV'] 69601 18846 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 79.337 2 -2.2491513599172457 0.4628938552224248 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 132615 23762 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 97.901 2 -2.2492437615393968 0.4628938552224248 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 52638 24809 KLQRRWKR True NCI_RA007_Epitope_Rep5 1169.7257782147697 1169.7246899358602 102.92 2 -2.249338131934627 0.4628938552224248 1.0 ['ENST00000593704.1_1_19:35835757-35836128:+|nuORF', 'nc|ENSG00000012124|P20273-2|CD22', 'nc|ENSG00000012124|P20273-5|CD22', 'nc|ENSG00000012124|P20273-4|CD22', 'nc|ENSG00000012124|P20273-3|CD22', 'ENSG00000012124|ENST00000085219|CD22'] 127955 24445 VPHGAAPT True H1975_Epitope_Rep1 748.38678791124 748.38623496793 101.33 1 -2.2493410898056707 0.4628938552224248 1.0 ['ENST00000559622.5_2_15:59397358-59406659:+|nuORF', 'ENST00000288207.6_1_15:59397316-59399528:+|nuORF'] 100388 23894 SKVKMRFYK True PC9_epitope_Rep2 1185.6692344250898 1185.6681299358602 97.387 2 -2.249388731071569 0.46289954943016165 1.0 ['ENSG00000149201|ENST00000445632|CCDC81'] 80013 22751 PFEPARLL True H1975_Epitope_Rep1 941.5334521449299 941.53234993586 94.63 2 -2.2501452454203554 0.4629476496406081 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 13292 9325 DLTGILWHM True NCI_RA007_Epitope_Rep5 1084.5375515492 1084.5364499358602 42.51 2 -2.2505617189953506 0.4629639445757842 1.0 ['ENST00000485939.5_1_3:107364734-107463499:+|nuORF'] 132787 23982 VVIWAKEL True PC9_epitope_Rep4 956.5695033004799 956.56840993586 100.71 2 -2.2507496239294165 0.46297120807361236 1.0 ['ENSG00000119714|ENST00000650645|GPR68'] 53714 21956 KSKAYTVV True PC9_epitope_Rep5 894.5174677276199 894.51636993586 89.489 2 -2.2510648241052484 0.46297120807361236 1.0 ['ENSG00000160602|ENST00000268766|NEK8'] 30560 12579 GAHACARA True H1975_Epitope_Rep2 755.34969120987 755.3491449679301 53.48 1 -2.251540752670857 0.46297120807361236 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 32626 14713 GGKSGKAP True H1975_Epitope_Rep2 700.3867879112398 700.38623496793 61.755 1 -2.2516248281862072 0.46297120807361236 1.0 ['ENSG00000118689|ENST00000406360|FOXO3', 'ENST00000395675.4_1_17:18575090-18575600:-|nuORF', 'nc|ENSG00000118689|O43524-2|FOXO3', 'nc|ENSG00000184481|P98177-2|FOXO4', 'ENSG00000184481|ENST00000374259|FOXO4'] 112624 15410 TLEWATIR True PC9_epitope_Rep1 988.5341804209199 988.5336349679301 64.093 1 -2.2517186009790775 0.46297120807361236 1.0 ['ENSG00000138678|ENST00000264409|GPAT3'] 124173 24942 VGSTSTRR True H1975_Epitope_Rep2 862.46207810982 862.46098993586 102.51 2 -2.251962608611903 0.4629769009784487 1.0 ['PTGER3|p.G48Dfs*88|1|0.39|ENSG00000050628|chr1:71047435-71047435|C/-|frameshift_variant'] 103381 22055 SPPHIPGP True H1975_Epitope_Rep1 800.41808803952 800.41698993586 91.742 2 -2.252420932502752 0.4629784708014883 1.0 ['nc|ENSG00000166199|Q96Q83-2|ALKBH3'] 80799 17314 PHLLRATN True H1975_Epitope_Rep2 920.51919906312 920.51810993586 71.891 2 -2.252462188553744 0.4629784708014883 1.0 ['ENST00000354371.6_1_2:238006612-238006942:+|nuORF'] 48634 26462 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 110.45 3 -2.25249271254819 0.4629784708014883 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 54248 26286 KWMVAPAA True H1975_Epitope_Rep1 872.4578446765198 872.45674993586 109.2 2 -2.2526229898276062 0.4629784708014883 1.0 ['ENST00000488281.1_1_14:47669981-47670080:-|nuORF'] 120666 23576 VEILERRT True PC9_epitope_Rep3 1014.5821932425 1014.58108993586 95.97 2 -2.2533889959149738 0.4630640562227711 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 40075 8529 HPTWPQKSVWH True NCI_RA007_Epitope_Rep1 1401.69420330297 1401.69310993586 37.177 2 -2.253459423761943 0.4630640562227711 1.0 ['nc|ENSG00000182871|P39060|COL18A1', 'nc|ENSG00000182871|P39060-1|COL18A1', 'ENST00000473212.1_1_21:46927018-46932309:+|nuORF', 'ENSG00000182871|ENST00000651438|COL18A1'] 88409 19519 QSNHHCHA True NCI_RA007_Epitope_Rep5 932.36713217916 932.36602993586 81.966 2 -2.253897460061868 0.4630803476786093 1.0 ['nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 136703 2843 WWYRGSLFIYQ True NCI_RA007_Epitope_Rep2 1517.7455701694898 1517.74337987172 15.419 4 -2.2541540028545426 0.46308603894383144 1.0 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF'] 65024 21084 LQIHQRIHT True PC9_epitope_Rep5 1144.6465248345598 1144.6454299358602 86.162 2 -2.254538624794319 0.4630868214917906 1.0 ['ZNF225|p.D444Hfs*2|1|0.05|ENSG00000256294|chr19:44131942-44131943|-/CCAC|frameshift_variant', 'ENSG00000256294|ENST00000262894|ZNF225'] 129736 25256 VRQGGGGV True PC9_epitope_Rep2 728.3929359208399 728.3923849679301 102.82 1 -2.254581250845695 0.4630868214917906 1.0 ['ENST00000271526.8_1_1:156737292-156737367:+|nuORF'] 89706 16190 RAAKTVAH True H1975_Epitope_Rep2 852.49298431528 852.49188993586 67.483 2 -2.255158846082347 0.4631243110319681 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 111969 10413 TIQSFDAINR True H1975_Epitope_Rep3 1163.5934862021898 1163.5923899358602 45.112 2 -2.255396489048163 0.46313000158990936 1.0 ['PEG3|p.H815R|1|0.94|ENSG00000198300|chr19:56815998-56815998|T/C|missense_variant'] 90166 19374 REDIKIC[Carbamidomethyl]D True PC9_epitope_Rep4 1047.5018945959 1047.5007899358602 82.632 2 -2.2559318279479217 0.46313569202721894 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant'] 90165 20080 REDIKIC[Carbamidomethyl]D True PC9_epitope_Rep2 1047.5018945959 1047.5007899358602 82.645 2 -2.2568771219456645 0.4631869005352128 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'OBSCN|p.Y7185*|1|0.57|ENSG00000154358|chr1:228372333-228372333|C/-|frameshift_variant', 'OBSCN|p.P6770Hfs*9|1|0.63|ENSG00000154358|chr1:228371085-228371085|C/-|frameshift_variant'] 139312 21144 YLKLKADG True H1975_Epitope_Rep3 906.5174677276199 906.51636993586 88.309 2 -2.2576474622793357 0.4631869005352128 1.0 ['nc|ENSG00000115085|P43403-3|ZAP70', 'ENSG00000115085|ENST00000264972|ZAP70', 'ENST00000483781.5_1_2:98330105-98349944:+|nuORF'] 92210 9497 RLIEDLWYYWL True NCI_RA007_Epitope_Rep1 1568.80275069244 1568.80164993586 40.936 2 -2.2577191360147433 0.4631869005352128 1.0 ['ENST00000507114.1_1_17:48777854-48785015:-|nuORF'] 136367 1263 WTHGAQGG True PC9_epitope_Rep2 812.3565504121198 812.35544993586 7.113 2 -2.2577553084392283 0.4631869005352128 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 128597 9658 VPTRLEGWF True PC9_epitope_Rep4 1103.5763795860698 1103.5752899358602 44.774 2 -2.2578085638136116 0.4631869005352128 1.0 ['ENSG00000168350|ENST00000305631|DEGS2'] 74602 10951 NGGGFGGA True H1975_Epitope_Rep1 635.2663384253899 635.26578496793 47.088 1 -2.258199223794529 0.4631869005352128 1.0 ['ENST00000580710.5_1_7:86782123-86783706:+|nuORF'] 138912 23438 YKIRSQAIH True PC9_epitope_Rep6 1114.6247267608198 1114.6236299358602 103.26 2 -2.2583632191229555 0.4631869005352128 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 55582 24207 LAHHVRQG True PC9_epitope_Rep4 916.4991323248801 916.49802993586 101.59 2 -2.2587063575414543 0.4631869005352128 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'ENST00000519884.1_1_8:22210459-22213015:+|nuORF'] 84846 10525 QEALPEAPA True H1975_Epitope_Rep2 924.4552613938798 924.45416993586 45.505 2 -2.2587986939865363 0.4631869005352128 1.0 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 98869 18298 SGVGKWGP True H1975_Epitope_Rep3 786.4024379753798 786.40134993586 76.689 2 -2.2596508891022915 0.46318924131791733 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 73620 21822 MWIVKLRN True PC9_epitope_Rep6 1058.6059058925398 1058.6048099358602 96.84 2 -2.2598189910211866 0.46318924131791733 1.0 ['ENST00000351223.7_1_1:46049867-46067967:+|nuORF'] 40291 19761 HQMSRSDA True PC9_epitope_Rep5 930.3977636010999 930.39721496793 81.054 1 -2.259958569392471 0.46318924131791733 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13'] 132487 8020 VVDGPPGP True H1975_Epitope_Rep3 736.3755545212 736.3750049679301 35.821 1 -2.2602245950317843 0.46318924131791733 1.0 ['COL11A1|p.G670V|1|0.39|ENSG00000060718|chr1:103002781-103002781|C/A|missense_variant'] 40560 24867 HRGEIWKFL True PC9_epitope_Rep2 1184.6454622054 1184.6443699358601 101.33 2 -2.2603652163525627 0.46318924131791733 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1'] 92313 16484 RLLRLGDT True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 72.627 2 -2.2606168912693283 0.46318924131791733 1.0 ['ENST00000576921.1_1_16:3072866-3073436:-|nuORF', 'nc|ENSG00000103145|Q9NWW0-2|HCFC1R1', 'ENSG00000103145|ENST00000248089|HCFC1R1'] 94351 23606 RRRLNQLLLPL True NCI_RA007_Epitope_Rep4 1390.8884864354197 1390.88738993586 102.4 2 -2.261262952618928 0.4632112162606106 1.0 ['ENSG00000089053|ENST00000261819|ANAPC5', 'ENST00000544442.5_1_12:121784793-121790143:-|nuORF', 'ENST00000545801.1_1_12:121785603-121790107:-|nuORF', 'ENST00000536416.5_1_12:121783870-121790143:-|nuORF'] 49795 20434 KHIARLSQKQ True NCI_RA007_Epitope_Rep4 1207.71493874755 1207.71328490379 88.477 3 -2.261426407500968 0.4632112162606106 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 112258 19675 TKRKEVKRY True H1975_Epitope_Rep1 1206.71968977482 1206.71858993586 81.894 2 -2.2617720505516434 0.4632176843354598 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 104145 17374 SQERPLKVP True NCI_RA007_Epitope_Rep3 1052.5978433066398 1052.59674993586 76.241 2 -2.261990224524328 0.4632176843354598 1.0 ['ENSG00000000457|ENST00000367771|SCYL3', 'nc|ENSG00000000457|Q8IZE3|SCYL3'] 60606 17943 LHHGPLCL True H1975_Epitope_Rep1 888.46399268612 888.46288993586 74.756 2 -2.261993308534769 0.4632176843354598 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.G351Vfs*12|1|0.13|ENSG00000168453|chr8:22127390-22127390|C/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 112170 12754 TKEKYRVV True NCI_RA007_Epitope_Rep1 1021.5920296502097 1021.59092993586 53.596 2 -2.262609900968157 0.4632339695020505 1.0 ['CDX4|p.D182H|1|0.26|ENSG00000131264|chrX:73453558-73453558|G/C|missense_variant', 'CDX4|p.S252Pfs*30|1|0.54|ENSG00000131264|chrX:73454484-73454484|T/-|frameshift_variant', 'ENSG00000131264|ENST00000373514|CDX4'] 11321 23500 DELEIRWVDCY True H1975_Epitope_Rep3 1439.63911606527 1439.63800993586 98.064 2 -2.263089846728314 0.46326162975521884 1.0 ['ENSG00000145982|ENST00000274680|FARS2'] 39677 18834 HLRPHHPD True PC9_epitope_Rep4 1007.5049459813101 1007.50384993586 80.532 2 -2.2633702747236177 0.46326162975521884 1.0 ['nc|ENSG00000155903|Q15283|RASA2', 'ENSG00000155903|ENST00000286364|RASA2'] 132727 22922 VVHSALLA True PC9_epitope_Rep6 808.48068829608 808.47958993586 101.28 2 -2.2634248337335436 0.46326162975521884 1.0 ['ENSG00000104442|ENST00000276569|ARMC1'] 73618 23757 MWIVKLRN True PC9_epitope_Rep2 1058.6059058925398 1058.6048099358602 96.854 2 -2.2634888588487256 0.46326731729026926 1.0 ['ENST00000351223.7_1_1:46049867-46067967:+|nuORF'] 48587 26275 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 109.15 3 -2.2638274053174885 0.46328360106811345 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 135600 22939 WLGAPPWG True PC9_epitope_Rep2 882.4388234840999 882.43772993586 93.732 2 -2.264145454049702 0.4633161675885307 1.0 ['ENST00000514507.1_1_5:663600-666098:+|nuORF'] 114157 23040 TPKKNKHKR True PC9_epitope_Rep5 1135.6938093801498 1135.6927099358602 93.614 2 -2.264302222765919 0.4633161675885307 1.0 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF'] 27617 23897 FNVKFGRTTCT True PC9_epitope_Rep3 1272.6284918119197 1272.62683490379 97.206 3 -2.264379535220407 0.4633324503311258 1.0 ['ENSG00000170367|ENST00000304710|CST5'] 115912 10081 TSFPTQGK True PC9_epitope_Rep4 864.4341320264799 864.43302993586 46.447 2 -2.2649603488828376 0.4633722531838698 1.0 ['TMEM132B|p.G937Afs*35|1|0.09|ENSG00000139364|chr12:125654281-125654281|G/-|frameshift_variant', 'nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-3|TMEM132B'] 91725 24086 RKDQSLRQLN True PC9_epitope_Rep2 1256.6949315789598 1256.69437496793 98.148 1 -2.2650592896468145 0.4633722531838698 1.0 ['ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENST00000470191.5_1_9:15845666-15971831:+|nuORF'] 124584 18024 VGVSVLLA True H1975_Epitope_Rep1 756.4745402864799 756.47344993586 75.105 2 -2.265207601298803 0.4633722531838698 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM3|p.R715Afs*61|1|0.07|ENSG00000218336|chr4:182688269-182688269|C/-|frameshift_variant'] 88932 22466 QVGASRTP True H1975_Epitope_Rep3 814.42971535238 814.42860993586 93.914 2 -2.265213319091042 0.4633722531838698 1.0 ['SLC7A8|p.R6Tfs*25|1|0.05|ENSG00000092068|chr14:23182886-23182898|TTGTTTCGGTGCC/-|frameshift_variant'] 53435 24556 KRDKEKRTA True PC9_epitope_Rep4 1130.6520041378199 1130.65090993586 102.94 2 -2.2652503429971023 0.4633722531838698 1.0 ['ENSG00000166351|ENST00000299443|POTED'] 40908 25111 HSPPSTLV True PC9_epitope_Rep1 836.4392174069201 836.43812993586 101.47 2 -2.2653013196952134 0.4633722531838698 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 34116 17555 GMIFFLSHLV True PC9_epitope_Rep3 1162.62088725034 1162.6197899358601 72.711 2 -2.265303950098843 0.4633722531838698 1.0 ['ENST00000372067.7_1_6:43752845-43752986:+|nuORF'] 113763 23048 TMKRWLKL True PC9_epitope_Rep3 1074.6372060208198 1074.63610993586 93.921 2 -2.265621329756027 0.46337690954933575 1.0 ['ENST00000556124.3_1_14:20915875-20915929:-|nuORF'] 88410 19894 QSNHHCHA True NCI_RA007_Epitope_Rep5 932.36713217916 932.36602993586 83.435 2 -2.2656468766389297 0.46337690954933575 1.0 ['nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 116091 23927 TSRCKVCA True PC9_epitope_Rep2 866.4102428610998 866.40914993586 97.514 2 -2.2656735696658794 0.46337690954933575 1.0 ['SYTL4|p.W100S|1|0.22|ENSG00000102362|chrX:100701485-100701485|C/G|missense_variant'] 86401 22584 QKGKRENK True PC9_epitope_Rep4 986.5621265042599 986.56102993586 95.104 2 -2.2658339219124892 0.46337690954933575 1.0 ['nc|ENSG00000230223|P0DMR3|ATXN8OS'] 110910 5459 TGVPHPGP True NCI_RA007_Epitope_Rep4 760.3867879112399 760.38568993586 27.581 2 -2.266250866424201 0.46337690954933575 1.0 ['ENST00000319119.4_1_9:129642901-129642961:+|nuORF'] 128341 14906 VPQGHPGP True NCI_RA007_Epitope_Rep1 787.3976869481098 787.39713496793 62.041 1 -2.266426149421655 0.46337690954933575 1.0 ['nc|ENSG00000196923|Q9NR12-4|PDLIM7'] 40657 22589 HRQAVVLY True PC9_epitope_Rep1 984.5504991913999 984.54940993586 91.696 2 -2.2666544044291803 0.46337690954933575 1.0 ['ENST00000467370.5_1_3:125824416-125834086:-|nuORF'] 122970 22012 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 97.592 2 -2.2668663567322773 0.46337690954933575 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 45264 25086 IPVFFAWR True PC9_epitope_Rep2 1034.5701720068198 1034.5690699358602 102.16 2 -2.266920240156288 0.46337690954933575 1.0 ['ENST00000510784.8_1_6:24875969-25042131:-|nuORF'] 52782 18388 KNKNQKQVRS True NCI_RA007_Epitope_Rep3 1228.7000169594 1228.6983749037902 80.516 3 -2.267670763803708 0.46337690954933575 1.0 ['ENST00000534968.5_1_1:160514984-160515056:-|nuORF'] 96571 9442 SAFGGHCY True NCI_RA007_Epitope_Rep5 840.32247340252 840.32136993586 42.956 2 -2.2677583802821837 0.46337690954933575 1.0 ['ENST00000561765.1_1_16:1795016-1797040:+|nuORF'] 122961 24177 VGHSAGHP True PC9_epitope_Rep3 760.36163579256 760.36052993586 98.285 2 -2.2677721902672703 0.46337690954933575 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 82916 20817 PSARHAGP True PC9_epitope_Rep2 791.4038349577098 791.4032849679301 85.515 1 -2.2680578632135027 0.4633931881985275 1.0 ['ENST00000354670.8_1_15:40398252-40401051:-|nuORF'] 30022 10208 FYEAAPGPP True PC9_epitope_Rep3 947.4388830537498 947.43778993586 44.216 2 -2.268682584522741 0.46339396379122216 1.0 ['ENSG00000128713|ENST00000249504|HOXD11'] 32477 14031 GGCGPSGP True NCI_RA007_Epitope_Rep3 630.24316045266 630.2426149679301 62.499 1 -2.2686848468454905 0.46339396379122216 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 98158 5106 SESQGSGVFLP True H1975_Epitope_Rep1 1106.5244035828598 1106.5233099358602 24.711 2 -2.2695619425424747 0.4634102417424098 1.0 ['ENSG00000173145|ENST00000371361|NOC3L'] 104630 22734 SQSSVKKA True PC9_epitope_Rep2 833.4606811274899 833.45958993586 92.942 2 -2.269792971083752 0.46341592601616544 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 23246 5815 EVNQFPSD True PC9_epitope_Rep1 934.4032258210199 934.40212993586 27.184 2 -2.270271392403166 0.4634533898305085 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 82685 24033 PQRIHHMA True NCI_RA007_Epitope_Rep5 988.5025034531601 988.50140993586 99.839 2 -2.2703395590161835 0.46345416410669266 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2'] 79764 22281 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 92.08 2 -2.270409384723609 0.46345416410669266 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 24254 8739 EYSRKEVP True PC9_epitope_Rep5 1006.5083595958998 1006.50726993586 38.557 2 -2.272094463639669 0.463527268490568 1.0 ['ENSG00000187889|ENST00000343433|FYB2', 'ENST00000493000.5_1_1:57206466-57216840:-|nuORF'] 83462 23958 PTPPSGTE True PC9_epitope_Rep3 784.3602983798801 784.35920993586 97.44 2 -2.2724652793468123 0.463527268490568 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 124391 20517 VGVAPAPL True PC9_epitope_Rep4 722.4326754745 722.43212496793 87.07 1 -2.2725060500814305 0.463527268490568 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 35278 21531 GRGFSLKA True NCI_RA007_Epitope_Rep5 834.47118624154 834.47008993586 89.903 2 -2.272619782470521 0.463527268490568 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 102725 23462 SMKVKASS True H1975_Epitope_Rep3 836.4425885352 836.44203496793 97.916 1 -2.272638766180819 0.463527268490568 1.0 ['ENST00000418170.5_1_22:35660034-35689641:+|nuORF', 'ENSG00000100281|ENST00000216106|HMGXB4'] 120692 10346 VEKDEGRTL True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 44.74 2 -2.272641495089265 0.463527268490568 1.0 ['nc|ENSG00000112659|Q8IWT3-3|CUL9', 'ENSG00000112659|ENST00000252050|CUL9', 'ENST00000515773.5_1_6:43164260-43192180:+|nuORF'] 29938 11621 FVYNYLKYM True NCI_RA007_Epitope_Rep4 1239.5998174525898 1239.59872993586 51.654 2 -2.272801050344995 0.463527268490568 1.0 ['ENST00000340807.3_1_13:99910724-99913984:-|nuORF'] 60607 17902 LHHGPLCL True H1975_Epitope_Rep3 888.46399268612 888.46288993586 74.965 2 -2.2729882371034145 0.463527268490568 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.G351Vfs*12|1|0.13|ENSG00000168453|chr8:22127390-22127390|C/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 7638 16175 ASHHLDGG True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 67.427 2 -2.2732860201352376 0.463527268490568 1.0 ['ENST00000593460.1_1_19:18119032-18119587:+|nuORF'] 97165 24228 SDSYICFA True NCI_RA007_Epitope_Rep2 904.3636695081599 904.36256993586 101.74 2 -2.2737139827143555 0.463527268490568 1.0 ['ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 124585 17977 VGVSVLLA True H1975_Epitope_Rep3 756.4745402864799 756.47344993586 75.3 2 -2.273716335457433 0.463527268490568 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM3|p.R715Afs*61|1|0.07|ENSG00000218336|chr4:182688269-182688269|C/-|frameshift_variant'] 65461 24598 LRKHREQLVI True PC9_epitope_Rep4 1290.7884380409798 1290.7873499358602 103.11 2 -2.2737954428787814 0.463528041095165 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 121236 11546 VETDQRKM-[Oxidation] True H1975_Epitope_Rep1 1021.4862446327699 1021.4856749679301 49.398 1 -2.2738992706664907 0.463528041095165 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 91630 17774 RIPRPQHK True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 77.928 2 -2.2741418787161463 0.46353372309778 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000285383.6_1_7:6895119-6895377:-|nuORF'] 89766 25217 RAHVTRRRQLF True PC9_epitope_Rep2 1438.83818219806 1438.8370899358601 102.66 2 -2.274623709562627 0.4635605876060455 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 109377 18398 TCTGKINI True NCI_RA007_Epitope_Rep3 848.4425885352 848.44148993586 80.556 2 -2.274982257069778 0.4635662691435955 1.0 ['DSG1|p.T478K|1|0.42|ENSG00000134760|chr18:31339771-31339771|C/A|missense_variant'] 52910 25506 KPGFLRKNQ True PC9_epitope_Rep1 1086.62981214126 1086.6287099358601 103.1 2 -2.275199960416268 0.46357195056079814 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 65564 17481 LRRVLDTA True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 74.026 2 -2.2754652767746246 0.46357763185765727 1.0 ['ENSG00000102901|ENST00000562787|CENPT', 'ENST00000436104.6_1_16:67865250-67867798:-|nuORF', 'nc|ENSG00000102901|Q96BT3-2|CENPT', 'ENST00000565157.5_1_16:67864257-67867798:-|nuORF', 'nc|ENSG00000102901|Q96BT3-3|CENPT', 'ENST00000564128.1_1_16:67866129-67867804:-|nuORF', 'ENST00000569862.5_1_16:67865986-67867804:-|nuORF'] 122333 4252 VGCWGRLMFG True H1975_Epitope_Rep2 1124.5259413196798 1124.5243049037902 21.465 3 -2.2756006404338054 0.4635833130341767 1.0 ['ENST00000553264.5_1_14:104177886-104178036:-|nuORF'] 39874 19990 HPDGRRLL True PC9_epitope_Rep2 962.5409971368599 962.53990993586 82.295 2 -2.2757308159429313 0.4635946750262118 1.0 ['ENSG00000136040|ENST00000258526|PLXNC1'] 80929 21677 PIDDNRWH True PC9_epitope_Rep5 1051.48354183039 1051.48297496793 88.428 1 -2.275947964174816 0.4635946750262118 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant'] 125549 17416 VKKAVPKEDI True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 73.775 3 -2.2761464658813297 0.46359544612126025 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 83382 23644 PTHPSLLT True H1975_Epitope_Rep1 864.4705175352 864.46942993586 98.188 2 -2.2761671512885533 0.46359544612126025 1.0 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF'] 95435 14247 RWGGSPGW True PC9_epitope_Rep6 901.4194850218498 901.41893496793 66.692 1 -2.2767716820001946 0.46360112680829435 1.0 ['ENST00000437791.2_1_9:139904571-139904793:-|nuORF'] 72189 19050 MGRVTEGKEP True PC9_epitope_Rep5 1102.54409348162 1102.54298993586 78.304 2 -2.277804044726416 0.46361816814749707 1.0 ['ENST00000434813.3_1_2:201724904-201726163:-|nuORF'] 60609 17057 LHHGPLCL True NCI_RA007_Epitope_Rep3 888.46399268612 888.46288993586 74.958 2 -2.2778678318415455 0.46361816814749707 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.G351Vfs*12|1|0.13|ENSG00000168453|chr8:22127390-22127390|C/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 102739 23015 SMTIKTGK True PC9_epitope_Rep6 864.47388866348 864.47278993586 101.63 2 -2.2779107307735607 0.46361816814749707 1.0 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 110750 16043 TGGGGGGD True PC9_epitope_Rep4 576.21396849936 576.2134249679301 69.644 1 -2.2781531540403104 0.4636246187732972 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 31731 12042 GEGSHSSR True H1975_Epitope_Rep2 815.3521933076701 815.35164496793 51.399 1 -2.2781691540230615 0.4636246187732972 1.0 ['ZBTB4|p.G750E|1|0.47|ENSG00000174282|chr17:7462733-7462733|C/T|missense_variant'] 129967 6597 VRVPGEGASW True NCI_RA007_Epitope_Rep5 1056.53524305008 1056.5341499358601 32.034 2 -2.278356822888352 0.4636246187732972 1.0 ['ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22'] 71609 10232 MDKDGYFWFVA True PC9_epitope_Rep6 1377.60635938501 1377.6052699358602 50.014 2 -2.27878199084567 0.46363029873031675 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 20491 24473 EPLPLAYA True PC9_epitope_Rep3 872.4643695255999 872.46326993586 99.472 2 -2.279646626680248 0.46365715737975727 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 109087 8698 TALLHNNRK True PC9_epitope_Rep5 1065.60432566941 1065.60322993586 38.398 2 -2.2801238204904872 0.4636628368719225 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ITPR1|p.G1348Efs*17|1|0.18|ENSG00000150995|chr3:4693501-4693501|G/-|frameshift_variant', 'ITPR1|p.I1404Efs*19|1|0.08|ENSG00000150995|chr3:4693669-4693670|-/GAAGAGAGAGGTTCTGTTAGCATTT|frameshift_variant', 'ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant', 'ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D1705Tfs*6|1|0.16|ENSG00000096433|chr6:33684659-33684659|G/-|frameshift_variant'] 13721 9408 DPVMSQCA True PC9_epitope_Rep1 849.3360748613298 849.33496993586 41.046 2 -2.280608135511765 0.4636741954954096 1.0 ['ENSG00000153721|ENST00000607772|CNKSR3', 'nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF', 'CNKSR3|p.C208R|1|0.28|ENSG00000153721|chr6:154430519-154430519|A/G|missense_variant'] 98030 23201 SEQGPGPAAAL True H1975_Epitope_Rep3 996.4876241513198 996.48652993586 96.88 2 -2.280659509108863 0.4636741954954096 1.0 ['ENSG00000213221|ENST00000371738|DNLZ', 'ENST00000481053.5_1_9:139257776-139258349:-|nuORF'] 36103 13980 GVAGRHLL True PC9_epitope_Rep2 821.4871706588499 821.4866249679301 59.046 1 -2.2810551240283305 0.4636961424835079 1.0 ['ENST00000372429.7_1_9:132637899-132641867:+|nuORF'] 104340 22759 SQIRTPPSPS True PC9_epitope_Rep5 1068.55637241748 1068.55526993586 92.539 2 -2.281153173059114 0.4636961424835079 1.0 ['ENST00000514287.1_1_5:139028593-139029007:-|nuORF'] 39818 24091 HNFLWSFKV True NCI_RA007_Epitope_Rep4 1176.60801406752 1176.60637490379 104.44 3 -2.281191524210621 0.46369768008216594 1.0 ['ENST00000600588.1_1_19:6593880-6593970:+|nuORF'] 94049 22320 RRKSEEHL True NCI_RA007_Epitope_Rep5 1053.56794016069 1053.56684993586 93.006 2 -2.281225856828095 0.46369768008216594 1.0 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3'] 135556 19549 WKTLKMLNFRL True NCI_RA007_Epitope_Rep3 1448.8326113520798 1448.8315099358601 85.275 2 -2.281334426482446 0.46369768008216594 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 110740 11328 TGGGGGGD True NCI_RA007_Epitope_Rep3 576.21396849936 576.2134249679301 51.672 1 -2.2813665070991216 0.46369768008216594 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 99089 20192 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 84.611 2 -2.2820535265460853 0.4637033586040405 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 20258 14784 ENNLQFQIR True PC9_epitope_Rep1 1160.5938205553598 1160.59272993586 61.686 2 -2.282406724395362 0.463707969848395 1.0 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR', 'LEPR|p.G575V|1|0.09|ENSG00000116678|chr1:65608873-65608873|G/T|missense_variant', 'LEPR|p.G575S|1|0.07|ENSG00000116678|chr1:65608872-65608872|G/A|missense_variant'] 59391 18667 LFLLPIRE True H1975_Epitope_Rep3 999.61170246563 999.61060993586 78.277 2 -2.28244877426253 0.463707969848395 1.0 ['ENSG00000176438|ENST00000682763|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-2|SYNE3'] 135496 23672 WIPFIYRGVRV True PC9_epitope_Rep5 1404.80302547596 1404.80137490379 96.033 3 -2.282633779274378 0.463707969848395 1.0 ['ENSG00000104356|ENST00000401707|POP1'] 100378 15371 SKTSGKAK True NCI_RA007_Epitope_Rep4 805.4657665079299 805.46466993586 66.798 2 -2.2828106624262943 0.463707969848395 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 110568 17717 TFRALLLHR True NCI_RA007_Epitope_Rep3 1125.6770966868498 1125.67546490379 77.673 3 -2.2829164362106416 0.463707969848395 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 92229 20900 RLKAGHGG True PC9_epitope_Rep6 794.4511195032999 794.45002993586 93.164 2 -2.283153169727904 0.463707969848395 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 134862 19251 VYVLHTHYM True NCI_RA007_Epitope_Rep5 1161.56410065021 1161.56300993586 80.915 2 -2.2834171307184703 0.463707969848395 1.0 ['ENST00000514092.5_1_5:88673161-88761545:+|nuORF'] 52916 23349 KPGKDIRN True PC9_epitope_Rep1 926.52976374682 926.52866993586 94.602 2 -2.2834891936941304 0.463707969848395 1.0 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 64828 18527 LQDEYWVII True PC9_epitope_Rep5 1177.60192562757 1177.60082993586 76.288 2 -2.283545410771787 0.463707969848395 1.0 ['ENSG00000071991|ENST00000262150|CDH19', 'nc|ENSG00000071991|Q9H159-2|CDH19'] 65456 19329 LRKAGGTG True H1975_Epitope_Rep3 758.43988611326 758.43878993586 81.021 2 -2.283679425431394 0.463707969848395 1.0 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'ENST00000447541.5_1_3:49713127-49713830:+|nuORF', 'ENST00000463995.5_1_3:49713127-49713790:+|nuORF'] 32738 24943 GHAGESHV True PC9_epitope_Rep1 792.35146503168 792.35036993586 100.86 2 -2.2836879827897043 0.463707969848395 1.0 ['ENST00000362074.7_1_1:145273244-145273415:+|nuORF'] 53006 22782 KPHYDGGLEI True H1975_Epitope_Rep1 1127.56112344475 1127.56002993586 94.755 2 -2.2838176182041368 0.463707969848395 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 36061 10885 GVAAKGKH True NCI_RA007_Epitope_Rep2 766.4449714937 766.4444249679301 46.946 1 -2.284128424593072 0.4637242343076744 1.0 ['ENSG00000119138|ENST00000377126|KLF9'] 130176 21818 VSEGAPVI True NCI_RA007_Epitope_Rep4 770.41741933318 770.41632993586 94.583 2 -2.2854841041356395 0.463778702321593 1.0 ['nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2', 'SPHK2|p.S484P|1|0.09|ENSG00000063176|chr19:48629258-48629258|T/C|missense_variant'] 3406 7435 AGILEVLR True H1975_Epitope_Rep3 869.5334521449299 869.53234993586 33.577 2 -2.2855943648541994 0.463778702321593 1.0 ['ENST00000357496.6_1_3:49114449-49131448:-|nuORF'] 52810 23412 KPAATWPP True H1975_Epitope_Rep3 866.46503823194 866.46394993586 97.72 2 -2.285626889709693 0.463778702321593 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 126673 22438 VLPAAQLR True H1975_Epitope_Rep2 866.5337864981 866.53268993586 92.725 2 -2.2856644000220125 0.463778702321593 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 80547 8055 PGPLSKQGS True PC9_epitope_Rep2 869.46068112749 869.45958993586 36.343 2 -2.2859093981974765 0.4637843789036861 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 137634 24894 YEGRKTSKHKR True H1975_Epitope_Rep2 1388.7636798451201 1388.7625899358602 102.33 2 -2.286710532169293 0.46382181383187066 1.0 ['nc|ENSG00000116514|Q6ZMZ0-3|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0-2|RNF19B', 'ENSG00000116514|ENST00000235150|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0|RNF19B'] 48604 25831 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 106.07 3 -2.286869431280169 0.4638380758807588 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 46127 10414 ISKDLGLDPR True NCI_RA007_Epitope_Rep2 1112.61897267404 1112.6178699358602 45.101 2 -2.2881167012663326 0.4638649235166464 1.0 ['nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8', 'ENSG00000253767|ENST00000398604|PCDHGA8'] 33315 24554 GKPNKRRGF True PC9_epitope_Rep2 1058.6097454030198 1058.60864993586 100.07 2 -2.2883271898175175 0.46388118476488893 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 119879 7230 VDGGSPSL True PC9_epitope_Rep6 730.34973369618 730.34918496793 36.923 1 -2.288779248785131 0.4638868599616797 1.0 ['ENSG00000158077|ENST00000299481|NLRP14', 'NLRP14|p.L805Ffs*6|1|0.12|ENSG00000158077|chr11:7057798-7057798|C/-|frameshift_variant', 'NLRP14|p.A488Cfs*22|1|0.17|ENSG00000158077|chr11:7043481-7043482|-/T|frameshift_variant'] 132847 24444 VVLKRLFM True H1975_Epitope_Rep1 1004.62049332752 1004.61938993586 101.33 2 -2.288830548630545 0.46389253503831984 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 110748 16762 TGGGGGGD True PC9_epitope_Rep2 576.21396849936 576.2134249679301 69.722 1 -2.289195457762462 0.46389329946014607 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 35586 22655 GTAGVKVR True H1975_Epitope_Rep1 786.47118624154 786.47008993586 94.224 2 -2.289318197428978 0.46389329946014607 1.0 ['ENST00000357776.6_2_17:42977098-42978910:+|nuORF'] 100323 17392 SKKKKKKKSG True H1975_Epitope_Rep3 1145.7608263108098 1145.76027496793 72.57 1 -2.2894886372349297 0.46389406384960624 1.0 ['ENST00000261798.9_1_5:148872814-148873015:-|nuORF'] 73789 6580 NAGIAAAY True H1975_Epitope_Rep3 749.37080349393 749.37025496793 30.265 1 -2.2897326284105683 0.46389406384960624 1.0 ['ENSG00000139410|ENST00000403593|SDSL'] 19021 15345 ELEVLSVLPP True NCI_RA007_Epitope_Rep1 1094.6223267189798 1094.6212299358601 63.766 2 -2.2897870934408253 0.46389482820670236 1.0 ['nc|ENSG00000198198|Q5T011-5|SZT2', 'ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'SZT2|p.S1779Rfs*35|1|0.08|ENSG00000198198|chr1:43432581-43432582|-/A|frameshift_variant', 'nc|ENSG00000198198|Q5T011-7|SZT2'] 84598 23919 QDAEEEQDDSN True H1975_Epitope_Rep3 1278.4483976597799 1278.4473099358602 99.718 2 -2.289793284717793 0.46389482820670236 1.0 ['TMX4|p.K248Q|1|0.39|ENSG00000125827|chr20:7982559-7982559|T/G|missense_variant'] 26768 10573 FKHCWDTFVDH True H1975_Epitope_Rep2 1433.61865540421 1433.61700490379 45.692 3 -2.2901001094207825 0.4639167619289555 1.0 ['ENSG00000239713|ENST00000407997|APOBEC3G', 'nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A'] 44234 19838 IKLAGDSFI True PC9_epitope_Rep3 962.5436824754601 962.54258993586 81.542 2 -2.2902519345389156 0.4639167619289555 1.0 ['ENSG00000166012|ENST00000448108|TAF1D'] 93817 18633 RRARLPVH True NCI_RA007_Epitope_Rep2 1003.6151651366299 1003.61406993586 77.277 2 -2.2904298152343254 0.4639224361484806 1.0 ['nc|ENSG00000122390|Q9H7X0-4|NAA60'] 79284 7228 PAPRNQDSST True PC9_epitope_Rep5 1071.49450043691 1071.4934099358602 32.766 2 -2.2912667030310443 0.46393378422718273 1.0 ['ENST00000397068.7_2_11:3661554-3663324:-|nuORF'] 135166 7881 WEMKPYVALSQ True PC9_epitope_Rep1 1350.6642086143 1350.66256490379 35.142 3 -2.291383153706499 0.46393378422718273 1.0 ['nc|ENSG00000078177|Q86UW6-2|N4BP2', 'ENSG00000078177|ENST00000261435|N4BP2'] 69148 25427 LTRRFGQQNR True PC9_epitope_Rep2 1274.6956002852996 1274.6945099358602 103.49 2 -2.2915427130068173 0.46395004233700254 1.0 ['ENST00000522674.1_1_7:27228344-27228893:+|nuORF'] 126676 14418 VLPAAQLR True NCI_RA007_Epitope_Rep3 866.5337864981 866.53268993586 64.025 2 -2.2921451595614695 0.46397197349759745 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 99082 15951 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 68.081 2 -2.2921731700182693 0.46397197349759745 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 81136 23038 PKGHGGAR True PC9_epitope_Rep4 778.41981937502 778.41872993586 96.838 2 -2.2925202970017504 0.46400939851613515 1.0 ['ENST00000427323.5_1_3:38388271-38390057:+|nuORF'] 85908 16414 QHGETPPL True PC9_epitope_Rep3 877.4293809992099 877.42828993586 68.273 2 -2.2928719589835596 0.46401659469985607 1.0 ['ENST00000381346.8_1_14:68144270-68144630:-|nuORF'] 58470 19297 LEPVKENMK True PC9_epitope_Rep4 1086.5743309807401 1086.5732299358601 82.331 2 -2.2928832365683327 0.46401659469985607 1.0 ['nc|ENSG00000156469|Q96E29-3|MTERF3', 'nc|ENSG00000156469|Q96E29-2|MTERF3', 'ENSG00000156469|ENST00000287025|MTERF3'] 58289 19948 LELVPWRAR True NCI_RA007_Epitope_Rep5 1138.66111226954 1138.6600099358602 83.644 2 -2.2930079311949676 0.46401659469985607 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 92163 24592 RLFFFLHF True PC9_epitope_Rep2 1125.61237117197 1125.61126993586 100.22 2 -2.2930161804651132 0.46401659469985607 1.0 ['ENST00000393467.1_1_7:116166483-116166657:+|nuORF'] 129505 18712 VRKMAVMIK True H1975_Epitope_Rep1 1074.6405771490997 1074.63946993586 78.032 2 -2.293038678286684 0.46401659469985607 1.0 ['ENST00000517608.5_1_8:74705439-74705553:-|nuORF'] 20262 9221 ENPERAALYF True NCI_RA007_Epitope_Rep3 1208.5825871653199 1208.5814899358602 43.367 2 -2.293334681192469 0.46402302864823103 1.0 ['ENSG00000115363|ENST00000393913|EVA1A'] 115626 20702 TRVLVLHR True PC9_epitope_Rep6 992.6243328379999 992.62322993586 92.392 2 -2.2933378253621206 0.46402302864823103 1.0 ['ENST00000528694.1_1_11:829540-829996:+|nuORF'] 25818 18037 FFDVLGNDR True H1975_Epitope_Rep3 1081.5192586327698 1081.5181699358602 75.557 2 -2.2935212738390067 0.46402302864823103 1.0 ['ENSG00000182827|ENST00000366812|ACBD3'] 13464 23035 DNEQNILWGL True PC9_epitope_Rep6 1200.5775017848798 1200.57640993586 101.7 2 -2.29403600720346 0.4640710324683571 1.0 ['ENSG00000184530|ENST00000329722|C6orf58'] 82619 15288 PQGHSTVL True NCI_RA007_Epitope_Rep5 837.43446637965 837.43336993586 65.501 2 -2.294109572650048 0.4640767040944832 1.0 ['ENST00000361441.4_1_22:39414388-39414700:+|nuORF'] 107573 6903 SVPGSLCVSRA True PC9_epitope_Rep4 1074.54917886206 1074.5480899358602 33.777 2 -2.2946876046323585 0.464089567085366 1.0 ['ENST00000341735.3_1_15:90319632-90321465:+|nuORF'] 32690 23497 GGSKGLVR True NCI_RA007_Epitope_Rep3 772.4555361774 772.45442993586 101.96 2 -2.294735766000385 0.464089567085366 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'PLCH2|p.G185Rfs*37|1|0.2|ENSG00000149527|chr1:2480218-2480219|-/C|frameshift_variant', 'nc|ENSG00000149527|O75038-5|PLCH2'] 83819 24935 PVLLPPVS True PC9_epitope_Rep5 820.50584041476 820.50474993586 101.09 2 -2.2947427624939976 0.464089567085366 1.0 ['ENSG00000132881|ENST00000375599|CPLANE2', 'ENST00000434014.1_1_1:16559094-16563153:-|nuORF'] 73538 23570 MVPLLMRK True H1975_Epitope_Rep3 986.57691426338 986.57580993586 98.337 2 -2.2948194945132565 0.464089567085366 1.0 ['ENST00000265433.7_1_8:90993651-90993702:-|nuORF'] 92849 22397 RPEKDFTE True NCI_RA007_Epitope_Rep5 1020.4876241513199 1020.48652993586 93.317 2 -2.2950375529653644 0.464089567085366 1.0 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1'] 59176 22589 LFAVVYHH True PC9_epitope_Rep1 984.5181364339601 984.51702993586 91.696 2 -2.2952693768706167 0.464089567085366 1.0 ['ENSG00000103194|ENST00000219473|USP10', 'nc|ENSG00000103194|Q14694-2|USP10', 'nc|ENSG00000103194|Q14694-3|USP10', 'ENST00000548656.2_1_14:19411434-19411701:-|nuORF'] 80737 11233 PHFACAGP True H1975_Epitope_Rep2 798.3482942275399 798.34774496793 48.249 1 -2.2960149579602644 0.4640952380952381 1.0 ['ENSG00000183153|ENST00000578689|GJD3', 'nc|ENSG00000183153|Q8N144-2|GJD3'] 63914 23567 LNQLQGKKS True PC9_epitope_Rep2 1014.5821932424999 1014.5816749679301 96.125 1 -2.296366087857797 0.46411149088369436 1.0 ['CON__Q2HJF0'] 98872 23027 SGVGKWGP True PC9_epitope_Rep2 786.4024379753798 786.40134993586 94.066 2 -2.2965444534935506 0.4641171615415547 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 99078 13304 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 57.853 2 -2.296639391891969 0.4641228320794049 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 113931 20946 TNVLHKRQ True NCI_RA007_Epitope_Rep3 994.5672118846999 994.56610993586 91.18 2 -2.2968844273825737 0.4641447542458071 1.0 ['ENST00000338700.9_1_4:154258246-154258330:+|nuORF'] 84861 6224 QEAPPGQRL True PC9_epitope_Rep3 994.5195929859399 994.51848993586 28.979 2 -2.2972244511142605 0.4641447542458071 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF'] 127883 13855 VPGHPPGG True NCI_RA007_Epitope_Rep3 716.3605731634 716.36002496793 61.827 1 -2.297499654868037 0.4641610056504349 1.0 ['ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'BCL9L|p.S1062Rfs*108|1|0.15|ENSG00000186174|chr11:118900137-118900138|-/C|frameshift_variant', 'BCL9L|p.Q692Rfs*20|1|0.15|ENSG00000186174|chr11:118901668-118901668|T/-|frameshift_variant', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 80003 22447 PFCLKVSK True PC9_epitope_Rep2 920.5153595526399 920.5142699358599 91.831 2 -2.2979969335096064 0.46416667548435564 1.0 ['ENSG00000056277|ENST00000370978|ZNF280C'] 126608 16293 VLMHGPKL True NCI_RA007_Epitope_Rep5 893.5156939058099 893.51458993586 69.427 2 -2.2981295652911666 0.4641674337893746 1.0 ['SRL|p.P286Qfs*30|1|0.29|ENSG00000185739|chr16:4192718-4192718|G/-|frameshift_variant', 'nc|ENSG00000185739|Q86TD4-3|SRL', 'ENSG00000185739|ENST00000399609|SRL', 'nc|ENSG00000185739|Q86TD4-1|SRL'] 39653 18158 HLPRGEGRF True PC9_epitope_Rep2 1067.5624608574299 1067.56136993586 75.149 2 -2.2983898265655696 0.4641674337893746 1.0 ['ENSG00000159592|ENST00000355105|GPBP1L1', 'GPBP1L1|p.P303Afs*3|1|0.07|ENSG00000159592|chr1:45633626-45633627|-/C|frameshift_variant'] 929 10108 ADNERVREY True PC9_epitope_Rep2 1150.5366996020598 1150.53560993586 44.218 2 -2.2984644510687513 0.4641731033753042 1.0 ['ENSG00000266826|ENST00000583666|IGBP1C'] 76308 17708 NPQLGAYA True NCI_RA007_Epitope_Rep5 832.40791727864 832.40682993586 74.896 2 -2.298849437287964 0.4641795308581888 1.0 ['ENSG00000128335|ENST00000358502|APOL2', 'APOL2|p.P243dup|1|0.18|ENSG00000128335|chr22:36227689-36227690|-/GGG|inframe_insertion'] 79560 8804 PDEKWILFDGP True H1975_Epitope_Rep3 1315.6448530687098 1315.6437499358601 38.87 2 -2.2991191036838154 0.4641795308581888 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 10662 24406 CPPPCSSV True PC9_epitope_Rep4 788.3196965212001 788.31858993586 102.36 2 -2.299201708821977 0.4641795308581888 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 60611 17891 LHHGPLCL True NCI_RA007_Epitope_Rep3 888.46399268612 888.46288993586 78.414 2 -2.2995005471878636 0.46419578051928817 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.G351Vfs*12|1|0.13|ENSG00000168453|chr8:22127390-22127390|C/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 62971 14498 LLPIGKCM True PC9_epitope_Rep6 873.48161689621 873.48050993586 67.65 2 -2.2998693977720195 0.4641965381522705 1.0 ['EPHA5|p.V284L|1|0.35|ENSG00000145242|chr4:65601701-65601701|C/A|missense_variant'] 113964 21655 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 89.583 2 -2.2999495717480083 0.4641965381522705 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 142367 17583 YYEKDPKR True PC9_epitope_Rep6 1097.5505587610498 1097.54946993586 80.272 2 -2.3004784772841322 0.46423394733222595 1.0 ['ENSG00000068976|ENST00000164139|PYGM'] 110685 23562 TGCGRGAK True NCI_RA007_Epitope_Rep5 748.3650069208398 748.3644549679301 97.944 1 -2.3006165682931674 0.46423961573456907 1.0 ['BCAR3|p.F804Cfs*5|1|0.04|ENSG00000137936|chr1:93562292-93562308|AGTTAAAATCTGGTTGA/-|frameshift_variant', 'ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 34378 20423 GPGAPLLV True PC9_epitope_Rep4 722.4326754745 722.43212496793 86.704 1 -2.3008937236758 0.4642558639003798 1.0 ['ENST00000508784.5_1_4:146681933-146682710:-|nuORF'] 20397 18100 EPAVLRWV True PC9_epitope_Rep5 968.5443511817999 968.54324993586 74.633 2 -2.3013864151059553 0.4642721117223868 1.0 ['ENST00000472018.5_1_16:89760510-89761152:+|nuORF'] 14061 20367 DRPFLFFIR True H1975_Epitope_Rep2 1209.66586329681 1209.66421490379 84.4 3 -2.3014231412911945 0.46427777954105437 1.0 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF', 'ENST00000473202.1_1_2:224840586-224842399:-|nuORF'] 72195 18737 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 78.895 2 -2.301764448136725 0.46429402678741455 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 89920 18407 RCRFLLFV True NCI_RA007_Epitope_Rep5 1052.5953412088397 1052.59424993586 77.613 2 -2.302212858030024 0.46431594092505607 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 94947 22551 RTKAPKQA True PC9_epitope_Rep5 898.5348491272599 898.53374993586 91.747 2 -2.302236089519372 0.46431594092505607 1.0 ['ENSG00000149609|ENST00000375222|C20orf144'] 37447 7044 GVTLPLKD True PC9_epitope_Rep2 841.49091862661 841.48982993586 32.494 2 -2.302373755382813 0.4643321872520497 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 16605 13919 EENWQEWRQRD True NCI_RA007_Epitope_Rep5 1574.68621737006 1574.68512993586 60.222 2 -2.302543405024695 0.4643336965375705 1.0 ['nc|ENSG00000165113|Q5VSY0-2|GKAP1', 'ENSG00000165113|ENST00000376371|GKAP1'] 92466 22381 RLSPPNRCSTT True PC9_epitope_Rep6 1230.61390437694 1230.61225490379 99.058 3 -2.302872539502124 0.4643336965375705 1.0 ['ENST00000486186.1_7:111368332-111379399:-|nuORF'] 79344 23444 PARRVIES True PC9_epitope_Rep1 926.5297637468199 926.52866993586 94.962 2 -2.302883288644613 0.4643336965375705 1.0 ['ENST00000403263.5_1_2:206863772-206864039:-|nuORF'] 62563 24027 LLKKYIEA True NCI_RA007_Epitope_Rep3 976.5957180483199 976.59462993586 104.07 2 -2.3029298132630203 0.4643336965375705 1.0 ['DCSTAMP|p.P332Qfs*7|1|0.12|ENSG00000164935|chr8:104349546-104349546|C/-|frameshift_variant', 'ENSG00000164935|ENST00000297581|DCSTAMP', 'DCSTAMP|p.Y198Tfs*34|1|0.2|ENSG00000164935|chr8:104349144-104349144|T/-|frameshift_variant', 'nc|ENSG00000164935|Q9H295-2|DCSTAMP'] 124831 23607 VHILLLSLTLA True NCI_RA007_Epitope_Rep1 1191.75909497531 1191.75798993586 97.368 2 -2.303350112351581 0.4643556082131787 1.0 ['ENSG00000126262|ENST00000599180|FFAR2'] 12365 7702 DISAERSP True PC9_epitope_Rep3 873.4192102383299 873.41810993586 34.621 2 -2.303430319890279 0.4643556082131787 1.0 ['ENSG00000196605|ENST00000397902|ZNF846'] 44443 20594 ILHYDETY True NCI_RA007_Epitope_Rep5 1052.4814761417201 1052.4803699358602 86.157 2 -2.3037788703088955 0.4644035882029366 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 37066 11379 GVPPGLCW True NCI_RA007_Epitope_Rep3 827.39999544723 827.39888993586 51.88 2 -2.3039962800248683 0.46440925391133253 1.0 ['ENST00000531735.5_1_17:43481028-43481106:-|nuORF'] 114295 18775 TPPTCKGI True H1975_Epitope_Rep1 815.4211248146299 815.42002993586 78.292 2 -2.304378495766593 0.46442549770452957 1.0 ['ENSG00000174175|ENST00000263686|SELP'] 48840 26217 KDWLDYRMF True H1975_Epitope_Rep1 1272.59612905448 1272.59502993586 108.89 2 -2.30565957031043 0.4644791402217145 1.0 ['ENST00000553666.1_1_14:92582502-92582559:-|nuORF'] 121929 4794 VFSDIPTQ True PC9_epitope_Rep1 905.4494477374499 905.44834993586 23.31 2 -2.3057734429354926 0.4644791402217145 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7'] 97183 10137 SDVERLER True NCI_RA007_Epitope_Rep2 1002.5094222250599 1002.50832993586 44.019 2 -2.305839023467343 0.46448480489120664 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000494465.5_1_2:242611409-242611676:+|nuORF', 'ENST00000475693.1_1_2:242607884-242611676:+|nuORF'] 128816 25534 VQAQIHLP True PC9_epitope_Rep2 904.5130510535198 904.51250496793 103.9 1 -2.3063271620186474 0.4645222027121369 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 53698 20315 KSFIRKDHLRK True NCI_RA007_Epitope_Rep5 1426.8521009267 1426.85044490379 85.08 3 -2.3064556931025924 0.46452295324730275 1.0 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 130613 18741 VSSLRRSKQV True NCI_RA007_Epitope_Rep3 1158.6833042661 1158.6816449037901 81.947 3 -2.306561176525838 0.46452295324730275 1.0 ['ENSG00000126860|ENST00000462804|EVI2A', 'nc|ENSG00000126860|P22794-2|EVI2A'] 58804 25653 LESLTLTGTKI True PC9_epitope_Rep1 1174.68090422426 1174.67980993586 103.71 2 -2.3068603527789753 0.46452370375071395 1.0 ['ENSG00000205213|ENST00000379214|LGR4', 'nc|ENSG00000205213|Q9BXB1-2|LGR4'] 125700 14711 VKPVILLIPQ True NCI_RA007_Epitope_Rep1 1118.7427166351797 1118.74217496793 61.278 1 -2.3072361344230017 0.46452370375071395 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 124894 19014 VHPFHLLV True NCI_RA007_Epitope_Rep2 960.5545219426799 960.55342993586 78.812 2 -2.3073833501748666 0.46452445422237265 1.0 ['CON__Q3SZH5'] 128378 9449 VPRKLNPH True NCI_RA007_Epitope_Rep5 959.5664836087099 959.56538993586 42.982 2 -2.3074814897451463 0.46452445422237265 1.0 ['ENST00000288616.7_1_12:121088117-121088276:+|nuORF'] 81442 21926 PLFFLKVP True PC9_epitope_Rep4 959.5844250886298 959.58332993586 92.547 2 -2.3078416026457127 0.46453011793325927 1.0 ['nc|ENSG00000083223|Q5VYS8-2|TUT7'] 60610 17311 LHHGPLCL True NCI_RA007_Epitope_Rep3 888.46399268612 888.46288993586 75.973 2 -2.307971641113434 0.46453578152433733 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.G351Vfs*12|1|0.13|ENSG00000168453|chr8:22127390-22127390|C/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 89989 24146 RDLEIERPIL True NCI_RA007_Epitope_Rep2 1252.71393568804 1252.71282993586 101.43 2 -2.3081979903864234 0.46453878207162047 1.0 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 11394 15340 DESKQLYK True H1975_Epitope_Rep1 1009.50802524273 1009.5074749679301 64.274 1 -2.308673729956469 0.46453878207162047 1.0 ['ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B'] 126675 13562 VLPAAQLR True NCI_RA007_Epitope_Rep3 866.5337864981 866.53268993586 60.643 2 -2.3087420745517493 0.46453878207162047 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 4429 10729 AIQVVENK True NCI_RA007_Epitope_Rep2 899.5076313199099 899.50652993586 46.333 2 -2.3089202980957806 0.46453878207162047 1.0 ['ENSG00000088538|ENST00000266037|DOCK3'] 91911 1283 RKLKSWLLQ True NCI_RA007_Epitope_Rep1 1170.7237125261 1170.7220549037902 6.7871 3 -2.3091608203420453 0.46453878207162047 1.0 ['ENST00000394701.4_1_4:107258107-107268703:+|nuORF'] 49501 20180 KFGASRAA True NCI_RA007_Epitope_Rep4 806.43988611326 806.43878993586 87.317 2 -2.30920573221551 0.46453878207162047 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 119124 20610 VAHSHRQL True PC9_epitope_Rep5 946.5096970085799 946.50858993586 84.325 2 -2.309368849595282 0.46453878207162047 1.0 ['ENST00000492736.1_1_8:101965500-101965572:-|nuORF'] 4083 8237 AHNYIWVLTET True H1975_Epitope_Rep1 1345.6666511424496 1345.66554993586 36.626 2 -2.309372396318438 0.46453878207162047 1.0 ['NEUROG2|p.A163V|1|0.1|ENSG00000178403|chr4:112514988-112514988|G/A|missense_variant'] 89104 16818 QVPQALHRV True H1975_Epitope_Rep3 1046.5985120129799 1046.59740993586 70.243 2 -2.3097670148269454 0.46455010787258344 1.0 ['nc|ENSG00000215790|P0CK97|SLC35E2A'] 100377 14957 SKTSGKAK True NCI_RA007_Epitope_Rep3 805.4657665079299 805.46466993586 66.275 2 -2.3098817675106607 0.46455010787258344 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 139041 20280 YLALLGEW True PC9_epitope_Rep4 963.50656869075 963.5060249679301 86.149 1 -2.310125422502075 0.46455160744500845 1.0 ['SLIT2|p.W674L|1|0.15|ENSG00000145147|chr4:20541497-20541497|G/T|missense_variant'] 110767 4634 TGHPPGPT True PC9_epitope_Rep6 762.36605246666 762.36494993586 25.138 2 -2.310611294661862 0.46455160744500845 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 78141 25541 NWWNLLILLE True H1975_Epitope_Rep2 1312.71795843932 1312.7168699358601 104.87 2 -2.3106367530833283 0.46455160744500845 1.0 ['ENST00000410047.1_1_7:23164348-23164677:+|nuORF'] 73501 17220 MVFHIIDL True NCI_RA007_Epitope_Rep4 986.52592423634 986.52482993586 74.549 2 -2.310785752844906 0.46455160744500845 1.0 ['ENSG00000011454|ENST00000373647|RABGAP1', 'ENST00000474707.1_1_9:125835857-125839047:+|nuORF', 'nc|ENSG00000152061|Q5R372-7|RABGAP1L', 'nc|ENSG00000152061|Q5R372-6|RABGAP1L', 'nc|ENSG00000152061|Q5R372-5|RABGAP1L', 'ENSG00000152061|ENST00000681986|RABGAP1L', 'nc|ENSG00000152061|Q5R372-4|RABGAP1L', 'nc|ENSG00000152061|Q5R372|RABGAP1L', 'nc|ENSG00000152061|Q5R372-3|RABGAP1L'] 40777 17176 HRVITEKK True NCI_RA007_Epitope_Rep4 1009.6032630402499 1009.60216993586 74.383 2 -2.31088138492958 0.46457500581604383 1.0 ['ST6GALNAC3|p.F279V|1|0.31|ENSG00000184005|chr1:76628723-76628723|T/G|missense_variant'] 29520 21611 FVGPGRPGE True H1975_Epitope_Rep3 914.4610154806599 914.45990993586 90.297 2 -2.3110750108471616 0.46457500581604383 1.0 ['ENSG00000079432|ENST00000681038|CIC'] 62654 9361 LLLGREGC True H1975_Epitope_Rep3 859.4585729525099 859.45746993586 41.007 2 -2.3111784346021143 0.46457500581604383 1.0 ['ENST00000310924.6_1_17:77912907-77913039:-|nuORF'] 128995 25696 VQLGPGPK True PC9_epitope_Rep3 794.46503823194 794.46394993586 104.38 2 -2.3112285245532975 0.46457500581604383 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 82771 16176 PRLTVSFSL True PC9_epitope_Rep6 1018.58113061334 1018.58002993586 74.577 2 -2.3112611381686343 0.46457500581604383 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 124089 4542 VGSMFFPF True PC9_epitope_Rep3 930.4309612223399 930.42986993586 22.564 2 -2.311304019488123 0.46457500581604383 1.0 ['ENST00000310015.10_1_2:174820725-174820848:-|nuORF'] 72191 11044 MGVLFGGR True NCI_RA007_Epitope_Rep4 835.4374435851098 835.43634993586 49.353 2 -2.3120474656996035 0.46457725330964766 1.0 ['ENSG00000175097|ENST00000311485|RAG2'] 80927 22609 PIDDAYMG True PC9_epitope_Rep6 880.36366950816 880.36256993586 100.01 2 -2.3123614409953994 0.46457725330964766 1.0 ['ENSG00000198488|ENST00000622824|B3GNT6', 'nc|ENSG00000198488|Q6ZMB0-3|B3GNT6'] 57409 8462 LEARLSSAA True PC9_epitope_Rep3 916.4977949122 916.49668993586 37.511 2 -2.312460078515487 0.46457725330964766 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 40625 23424 HRLLPLLN True H1975_Epitope_Rep1 974.60253476426 974.60142993586 97.348 2 -2.312545307864474 0.46457725330964766 1.0 ['nc|ENSG00000197467|Q5TAT6-10|COL13A1', 'nc|ENSG00000197467|Q5TAT6-8|COL13A1', 'ENSG00000197467|ENST00000645393|COL13A1'] 6956 18455 AQKLSEIHK True NCI_RA007_Epitope_Rep1 1052.59784330664 1052.59674993586 75.926 2 -2.3126355029224324 0.46457725330964766 1.0 ['ENSG00000174607|ENST00000310836|UGT8', 'UGT8|p.Q436E|1|0.37|ENSG00000174607|chr4:114675968-114675968|C/G|missense_variant'] 135662 18736 WLPFLPPP True NCI_RA007_Epitope_Rep4 965.5374748962099 965.53636993586 81.058 2 -2.3128570686414998 0.46457725330964766 1.0 ['nc|ENSG00000187045|Q8IU80-2|TMPRSS6'] 128176 16743 VPLSEFDF True NCI_RA007_Epitope_Rep5 952.4541987647199 952.45310993586 71.164 2 -2.31305230204459 0.46458291478540387 1.0 ['ENSG00000088205|ENST00000263239|DDX18', 'ENST00000450119.1_1_10:92814408-92814468:+|nuORF'] 80798 20612 PHLLNGKG True NCI_RA007_Epitope_Rep4 834.47118624154 834.47008993586 89.273 2 -2.3132088649142837 0.46458857614143423 1.0 ['ENST00000254351.8_1_2:20400819-20401029:-|nuORF'] 129596 23612 VRMVIEYARLR True PC9_epitope_Rep3 1404.8023738529598 1404.80187496793 96.109 1 -2.31336241972935 0.4645942373777425 1.0 ['ENSG00000049860|ENST00000261416|HEXB'] 30728 10148 GALHTPPI True H1975_Epitope_Rep3 804.4493881678 804.44828993586 44.078 2 -2.3137609713286826 0.46459798065232333 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 110749 17131 TGGGGGGD True PC9_epitope_Rep3 576.21396849936 576.2134249679301 71.049 1 -2.3141639174789694 0.46459798065232333 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 124388 15017 VGVAPAPL True NCI_RA007_Epitope_Rep5 722.4326754745 722.43212496793 64.431 1 -2.314349979490469 0.46459798065232333 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 56056 13047 LATAKGGK True H1975_Epitope_Rep3 744.4493881678 744.4488349679301 55.426 1 -2.314520259828015 0.46459798065232333 1.0 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 60661 23697 LHLLGKGTLRR True NCI_RA007_Epitope_Rep4 1262.7935234214199 1262.7924299358601 102.77 2 -2.314711166838912 0.46459798065232333 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 136452 7898 WVEERFDLAQY True H1975_Epitope_Rep2 1454.68302948258 1454.6819299358601 35.326 2 -2.314805996588527 0.46459798065232333 1.0 ['TIAM1|p.Q1487R|1|0.38|ENSG00000156299|chr21:31120684-31120684|T/C|missense_variant'] 53703 22810 KSHAKALG True H1975_Epitope_Rep3 810.4711862415398 810.47008993586 95.305 2 -2.314927080799695 0.46459798065232333 1.0 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 72992 13514 MQQPRKIKQ True PC9_epitope_Rep5 1155.6546469901098 1155.65299490379 57.002 3 -2.315007463003678 0.46459798065232333 1.0 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4', 'ENST00000533826.1_1_11:126278346-126283345:+|nuORF'] 31732 12134 GEGSHSSR True H1975_Epitope_Rep2 815.3521933076701 815.35164496793 51.758 1 -2.3150110322458617 0.46459798065232333 1.0 ['ZBTB4|p.G750E|1|0.47|ENSG00000174282|chr17:7462733-7462733|C/T|missense_variant'] 53488 21677 KRIHGREKRQA True PC9_epitope_Rep6 1377.8065477166099 1377.8049149037902 96.265 3 -2.3151072562996142 0.46459798065232333 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B'] 127207 23827 VLVRISKHN True NCI_RA007_Epitope_Rep3 1064.6454622053998 1064.6443699358601 103.25 2 -2.31578989240018 0.46463418501643816 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF'] 96728 5554 SALQNTNNAN True PC9_epitope_Rep5 1045.47885037277 1045.4777499358602 26.37 2 -2.3158206407977984 0.46463418501643816 1.0 ['ENSG00000105849|ENST00000222567|POLR1F'] 84104 21040 PWPQGIAG True NCI_RA007_Epitope_Rep5 824.4180880395198 824.41698993586 87.939 2 -2.3159400976817546 0.46463418501643816 1.0 ['COL1A1|p.G950W|1|0.33|ENSG00000108821|chr17:50189257-50189257|C/A|missense_variant'] 98792 11196 SGKTTLMT True H1975_Epitope_Rep1 837.4266041178901 837.4260549679301 48.034 1 -2.3159523868542657 0.46463418501643816 1.0 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2'] 92660 24807 RNLPLAIIIGI True NCI_RA007_Epitope_Rep5 1191.77032836535 1191.76922993586 102.91 2 -2.3160124102594275 0.46463418501643816 1.0 ['ENSG00000021488|ENST00000023064|SLC7A9'] 123893 22918 VGRRRRHR True PC9_epitope_Rep2 1091.6649092937098 1091.66437496793 93.659 1 -2.3162758660164515 0.46463418501643816 1.0 ['SPATA31A7|p.P72H|1|0.36|ENSG00000276040|chr9:61191478-61191478|C/A|missense_variant'] 40097 26551 HPVMGLIY True H1975_Epitope_Rep3 928.4840594243599 928.48296993586 110.85 2 -2.3163414167733927 0.46463418501643816 1.0 ['LRP5|p.M473I|1|0.18|ENSG00000162337|chr11:68389887-68389887|G/T|missense_variant'] 59389 24670 LFLLKNPE True H1975_Epitope_Rep1 972.56441792004 972.56332993586 102.21 2 -2.3163872239141274 0.46463418501643816 1.0 ['PTGIS|p.W318Cfs*18|1|0.25|ENSG00000124212|chr20:49514297-49514297|C/-|frameshift_variant', 'ENSG00000124212|ENST00000244043|PTGIS'] 110766 4495 TGHPPGPT True PC9_epitope_Rep6 762.36605246666 762.36494993586 24.494 2 -2.316929946482241 0.46463418501643816 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 80306 22026 PGFPSGVH True PC9_epitope_Rep6 796.3867879112399 796.38568993586 97.651 2 -2.3170082276740915 0.46463418501643816 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 126140 24996 VLFASSHT True PC9_epitope_Rep2 860.43921740692 860.43812993586 101.81 2 -2.31704537814438 0.46463418501643816 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 99071 19113 SHGPCVPP True H1975_Epitope_Rep2 792.35885891124 792.35776993586 79.334 2 -2.317741993652726 0.46463418501643816 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 119373 10051 VAPGVAGA True NCI_RA007_Epitope_Rep5 640.3544251538 640.3538749679301 45.301 1 -2.318891299938494 0.4646673925222778 1.0 ['ENST00000370873.8_1_20:60718414-60718447:-|nuORF'] 110249 9850 TERIEETMSV True H1975_Epitope_Rep3 1193.55980311541 1193.5587099358602 42.917 2 -2.319111753609297 0.4646673925222778 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant', 'ANK2|p.G2120Efs*36|1|0.24|ENSG00000145362|chr4:113354975-113354975|G/-|frameshift_variant'] 66393 14252 LSGKKHGG True PC9_epitope_Rep2 782.43988611326 782.4393349679301 60.087 1 -2.3191201492950446 0.4646673925222778 1.0 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10'] 109136 11471 TALVVVSIV True H1975_Epitope_Rep2 899.5691689473099 899.56806993586 49.178 2 -2.3193886462926563 0.4646673925222778 1.0 ['nc|ENSG00000163235|P01135-2|TGFA', 'ENSG00000163235|ENST00000295400|TGFA', 'nc|ENSG00000163235|P01135-3|TGFA', 'nc|ENSG00000163235|P01135-5|TGFA', 'nc|ENSG00000163235|P01135-4|TGFA'] 7303 25468 ARILKQYSH True PC9_epitope_Rep2 1114.62472676082 1114.6236299358602 103.64 2 -2.3195169161936717 0.46467379814806986 1.0 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 125642 24523 VKKTKTDLKH True PC9_epitope_Rep4 1196.7241064489199 1196.72300993586 102.81 2 -2.3197296497034703 0.46467379814806986 1.0 ['PHF12|p.Q258Kfs*12|1|0.0|ENSG00000109118|chr17:28921752-28921753|-/GCCATGACACATGCTTAAGATCTGTTTT|frameshift_variant'] 123296 20696 VGLLVGGL True PC9_epitope_Rep1 726.4639756027799 726.4634249679301 84.432 1 -2.3199226828628063 0.46467379814806986 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 103065 19603 SPGLLERR True NCI_RA007_Epitope_Rep2 926.52976374682 926.52866993586 81.199 2 -2.3201729894910215 0.4646802033676155 1.0 ['ENSG00000272031|ENST00000606888|ANKRD34A', 'ANKRD34A|p.R399Q|1|0.55|ENSG00000272031|chr1:145960564-145960564|C/T|missense_variant'] 104633 20833 SQSSVKKA True PC9_epitope_Rep6 833.4606811274899 833.45958993586 92.907 2 -2.320250715916682 0.4646802033676155 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 116210 4393 TTADYDRD True PC9_epitope_Rep1 955.3883040328699 955.38720993586 21.785 2 -2.3205076562037457 0.4646802033676155 1.0 ['ENSG00000197081|ENST00000356956|IGF2R'] 130466 21124 VSPFSNLRW True PC9_epitope_Rep3 1104.5716285587998 1104.5705299358601 86.537 2 -2.3208189423972017 0.46469151983426527 1.0 ['nc|ENSG00000211784|A0A0B4J240|TRAV10'] 136076 24540 WRKKWNVI True NCI_RA007_Epitope_Rep3 1128.6556329662799 1128.6545299358602 106.17 2 -2.320879770120381 0.46469151983426527 1.0 ['ENSG00000188993|ENST00000682860|LRRC66', 'LRRC66|p.Q325Sfs*33|1|0.18|ENSG00000188993|chr4:51996049-51996050|-/A|frameshift_variant'] 68591 21685 LTHITLEI True PC9_epitope_Rep2 938.54368247546 938.54258993586 88.888 2 -2.321340557582311 0.46471415133226934 1.0 ['ENSG00000197147|ENST00000330947|LRRC8B'] 91860 26569 RKKLLEHK True NCI_RA007_Epitope_Rep1 1050.6661976499797 1050.66510993586 110.02 2 -2.321456983245671 0.46471415133226934 1.0 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173937-53175208:+|nuORF'] 56411 8811 LDEDLLGPG True NCI_RA007_Epitope_Rep1 927.4549270407099 927.45382993586 38.274 2 -2.321475165051279 0.46471415133226934 1.0 ['ENST00000526878.5_1_11:460175-490579:+|nuORF', 'ENSG00000174915|ENST00000308020|PTDSS2'] 136071 23463 WRIILGNEH True NCI_RA007_Epitope_Rep3 1136.60907669668 1136.6079699358602 101.83 2 -2.3216133209208687 0.46471415133226934 1.0 ['nc|ENSG00000179988|Q8IV42|PSTK'] 74648 22344 NGLMFVKL True PC9_epitope_Rep1 920.5153595526399 920.5142699358599 90.761 2 -2.322889687717382 0.46477339984780586 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 32737 19992 GHAGESHV True NCI_RA007_Epitope_Rep3 792.35146503168 792.35036993586 87.128 2 -2.3229516249958713 0.46477339984780586 1.0 ['ENST00000362074.7_1_1:145273244-145273415:+|nuORF'] 95151 23373 RVFTTAIVV True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 96.37 2 -2.3231590481379043 0.46477339984780586 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1'] 80052 17079 PFIKFICQ True PC9_epitope_Rep6 994.53100961678 994.52990993586 78.263 2 -2.3234742951519314 0.4647741444545435 1.0 ['TRPC4|p.H369Q|1|0.12|ENSG00000133107|chr13:37692126-37692126|G/C|missense_variant'] 38627 20971 HFGFILLM True H1975_Epitope_Rep1 976.52044493308 976.51934993586 87.111 2 -2.3236046831755446 0.4647741444545435 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 89919 17843 RCRFLLFV True NCI_RA007_Epitope_Rep4 1052.5953412088397 1052.59424993586 77.256 2 -2.32421302376637 0.4647960262101036 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 99072 19343 SHGPCVPP True H1975_Epitope_Rep2 792.35885891124 792.35776993586 80.281 2 -2.324292247552833 0.4647960262101036 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 65939 16810 LSDSSKKI True NCI_RA007_Epitope_Rep1 876.4916469026 876.49109496793 69.515 1 -2.324487319317873 0.46480733867388135 1.0 ['ENSG00000172671|ENST00000344646|ZFAND4'] 70834 6836 LYDFLNELF True H1975_Epitope_Rep1 1172.57537652656 1172.57426993586 31.339 2 -2.3245494394561974 0.46480733867388135 1.0 ['ENST00000489169.1_1_10:120445642-120450964:-|nuORF'] 81004 9613 PIKSMMGAPIV True PC9_epitope_Rep5 1142.61917299818 1142.6180699358601 41.94 2 -2.3247337721675065 0.4648129947264407 1.0 ['ENSG00000183747|ENST00000573854|ACSM2A', 'ENSG00000066813|ENST00000329697|ACSM2B'] 25817 18116 FFDVLGNDR True H1975_Epitope_Rep1 1081.5192586327698 1081.5181699358602 75.479 2 -2.3259526417897463 0.464871491376395 1.0 ['ENSG00000182827|ENST00000366812|ACBD3'] 135668 25006 WLPTMRNLF True H1975_Epitope_Rep1 1176.6113851958 1176.60973490379 103.56 3 -2.3261668127841117 0.4648771466314399 1.0 ['PRODH2|p.M428Cfs*46|1|0.33|ENSG00000250799|chr19:35803027-35803027|G/-|frameshift_variant'] 93192 20286 RPPNLPFI True NCI_RA007_Epitope_Rep2 952.54943656224 952.54832993586 83.939 2 -2.32643571414014 0.4648786312863921 1.0 ['ENSG00000249715|ENST00000624922|FER1L5'] 69603 20360 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 85.251 2 -2.3264996640468474 0.4648786312863921 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 10656 21980 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 90.873 2 -2.3266225204114965 0.4648786312863921 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 137275 23369 YCPQENVL True NCI_RA007_Epitope_Rep5 964.4324177743199 964.43132993586 97.181 2 -2.3266506099091644 0.4648786312863921 1.0 ['ENSG00000154262|ENST00000284425|ABCA6'] 135587 17569 WLCAIARRRPL True NCI_RA007_Epitope_Rep3 1353.7815788387297 1353.77992490379 77.07 3 -2.327221032058761 0.4648842861671774 1.0 ['TRIL|p.T434Nfs*192|1|0.12|ENSG00000255690|chr7:28956746-28956747|-/T|frameshift_variant'] 38583 9539 HEWAGGGG True PC9_epitope_Rep5 769.3143512469697 769.3138049679301 41.651 1 -2.3273649862186945 0.46488502832022993 1.0 ['ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ALK|p.Y826Tfs*5|1|0.08|ENSG00000171094|chr2:29233577-29233577|G/-|frameshift_variant'] 89710 15651 RAAKTVAH True NCI_RA007_Epitope_Rep4 852.49298431528 852.49188993586 67.978 2 -2.3274601054199526 0.46488502832022993 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 87632 22748 QQQQRQIRLR True PC9_epitope_Rep2 1352.7749132351598 1352.77380993586 92.995 2 -2.3279850188668756 0.46490690449521316 1.0 ['ENST00000498134.1_1_13:33528197-33528527:-|nuORF'] 95736 25429 RYGQKKKKIH True PC9_epitope_Rep1 1284.77787335728 1284.77676993586 102.79 2 -2.328025185609438 0.46490690449521316 1.0 ['nc|ENSG00000074696|Q9P035-2|HACD3', 'ENSG00000074696|ENST00000261875|HACD3'] 69600 18753 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 78.961 2 -2.3288277997033893 0.4649548264384213 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 116627 10806 TVAHLLQGGN True PC9_epitope_Rep5 1008.5352430500799 1008.5346749679301 46.555 1 -2.329114845723112 0.464961220651324 1.0 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000514104.5_1_5:145522433-145523105:-|nuORF', 'ENST00000512412.1_1_5:145519224-145523084:-|nuORF', 'ENST00000508667.5_1_5:145522961-145531505:-|nuORF'] 25291 24846 FDPSKIPKLKL True NCI_RA007_Epitope_Rep1 1284.78055869588 1284.77997496793 102.85 1 -2.3291980457422072 0.464961220651324 1.0 ['ENSG00000105248|ENST00000262962|YJU2'] 56892 8748 LDPVPLPA True NCI_RA007_Epitope_Rep4 820.4694549060399 820.46834993586 40.446 2 -2.329330616621996 0.464961220651324 1.0 ['ENST00000220509.9_1_15:41191948-41192161:+|nuORF'] 81111 25013 PKARGGCP True NCI_RA007_Epitope_Rep4 784.4013924295599 784.40028993586 108.89 2 -2.32969913198031 0.46498383381585345 1.0 ['ENST00000485732.5_1_9:139747929-139748217:+|nuORF'] 136935 25079 YAGFHVAL True PC9_epitope_Rep5 876.4493881678 876.44828993586 101.61 2 -2.330175732427964 0.46498383381585345 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 75179 25506 NHYWYQMYI True H1975_Epitope_Rep1 1316.5648289262 1316.56372993586 105.71 2 -2.3302388312885185 0.46498383381585345 1.0 ['ENSG00000077147|ENST00000371142|TM9SF3'] 121190 9389 VESKHQTL True PC9_epitope_Rep2 940.4977949122 940.49668993586 41.451 2 -2.3303035622575092 0.46498383381585345 1.0 ['ENSG00000247596|ENST00000305533|TWF2'] 65467 23788 LRKKRRNLTML True H1975_Epitope_Rep2 1427.8871065364299 1427.88547490379 98.006 3 -2.330433610580924 0.46498457377118463 1.0 ['ENSG00000179240|ENST00000529331|GVQW3'] 107417 21547 SVLPGRRH True NCI_RA007_Epitope_Rep5 920.5304324531601 920.52932993586 89.966 2 -2.330453544499222 0.46498457377118463 1.0 ['ENSG00000135482|ENST00000257940|ZC3H10'] 69210 18612 LTSLRKLWLMH True NCI_RA007_Epitope_Rep5 1396.8013112238 1396.80020993586 78.403 2 -2.3306359381830557 0.4649853136952433 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B'] 41544 13815 HYRFRMKQ True PC9_epitope_Rep2 1164.5974664671598 1164.5963699358601 58.423 2 -2.330669694635228 0.4649853136952433 1.0 ['nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 133080 25229 VVPVVHPV True H1975_Epitope_Rep2 844.5170738047999 844.5165249679301 103.64 1 -2.3311005758859427 0.46499096643316745 1.0 ['ENST00000416938.5_1_7:99704896-99705589:+|nuORF'] 94278 6993 RRREWKERYGH True NCI_RA007_Epitope_Rep4 1571.8181750294698 1571.8165349037902 33.523 3 -2.331318261047223 0.46500866331403456 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2', 'ENST00000505524.1_1_5:36108630-36114563:-|nuORF'] 77650 22672 NTGILNKHL True PC9_epitope_Rep5 1008.5716285588001 1008.57052993586 92.211 2 -2.3313706823355895 0.46500866331403456 1.0 ['ENSG00000198900|ENST00000361337|TOP1'] 91535 17741 RIFWLITGIMF True NCI_RA007_Epitope_Rep3 1395.7736994936297 1395.7720649037901 77.791 3 -2.331409021671818 0.46500866331403456 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2'] 95369 9256 RVWEFYHYRRE True NCI_RA007_Epitope_Rep1 1639.8007936298297 1639.7996899358602 40.001 2 -2.3314526907006923 0.46500866331403456 1.0 ['nc|ENSG00000124523|Q9NXA8-3|SIRT5', 'nc|ENSG00000124523|Q9NXA8-2|SIRT5', 'ENSG00000124523|ENST00000606117|SIRT5'] 118765 15019 VAAAAPARQP True PC9_epitope_Rep2 950.52976374682 950.52866993586 63.023 2 -2.331689944629674 0.46500866331403456 1.0 ['ENST00000517310.5_1_17:45401201-45403631:+|nuORF'] 100364 24145 SKSNAGKI True H1975_Epitope_Rep1 803.45011644379 803.4495649679301 100.16 1 -2.3324702259270107 0.46506713997443294 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENST00000438277.5_1_2:128855105-128928859:+|nuORF'] 10327 24030 CEKKTYSVPA True H1975_Epitope_Rep1 1124.55359553616 1124.5524899358602 99.714 2 -2.33259715038027 0.4650727914298392 1.0 ['ENSG00000004961|ENST00000380762|HCCS'] 38581 9003 HEWAGGGG True PC9_epitope_Rep2 769.3143512469697 769.3138049679301 39.982 1 -2.3327116302564797 0.465089007448101 1.0 ['ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ALK|p.Y826Tfs*5|1|0.08|ENSG00000171094|chr2:29233577-29233577|G/-|frameshift_variant'] 114210 2622 TPLSAAAHTH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 14.738 2 -2.333332094663096 0.4650961335305303 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 33205 22874 GKAGRQHW True H1975_Epitope_Rep3 938.48348226074 938.4823899358599 95.557 2 -2.3334049654568583 0.4650961335305303 1.0 ['ENSG00000127311|ENST00000247815|HELB'] 104392 19623 SQKSSVKELLK True NCI_RA007_Epitope_Rep1 1245.7292513990099 1245.72814993586 80.519 2 -2.333499564430206 0.4650961335305303 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 10527 15798 CLFFFFFRFR True PC9_epitope_Rep4 1428.7165189706795 1428.7154299358601 68.692 2 -2.3336394634184847 0.4650961335305303 1.0 ['ENST00000554233.1_1_14:76524934-76525784:+|nuORF'] 32688 19527 GGSKGLVR True H1975_Epitope_Rep3 772.4555361774 772.45442993586 81.825 2 -2.3340905485393195 0.4650961335305303 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'PLCH2|p.G185Rfs*37|1|0.2|ENSG00000149527|chr1:2480218-2480219|-/C|frameshift_variant', 'nc|ENSG00000149527|O75038-5|PLCH2'] 93905 26164 RRFPKKWERPV True PC9_epitope_Rep1 1497.8680853440098 1497.8664449037901 105.96 3 -2.3341577812774017 0.46509687097251273 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 90017 18702 RDRDMADTPC True H1975_Epitope_Rep2 1178.4808416020599 1178.4797499358601 77.635 2 -2.3343906974718456 0.46509687097251273 1.0 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 39452 16208 HLAKNQGK True NCI_RA007_Epitope_Rep4 894.5035489989799 894.50244993586 70.285 2 -2.3351495981076713 0.46511529645396066 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 90901 21482 REWYKPLVWFW True PC9_epitope_Rep2 1608.8241548433598 1608.8230499358601 88.101 2 -2.3352539750862786 0.46511529645396066 1.0 ['KCNK10|p.E467Rfs*38|1|0.38|ENSG00000100433|chr14:88185754-88185754|G/-|frameshift_variant', 'nc|ENSG00000100433|P57789|KCNK10', 'nc|ENSG00000100433|P57789-4|KCNK10', 'ENSG00000100433|ENST00000319231|KCNK10'] 92074 23331 RKVLDLRRW True PC9_epitope_Rep6 1240.7516586094398 1240.75056993586 102.84 2 -2.3353827008456056 0.46511529645396066 1.0 ['ENSG00000134897|ENST00000257336|BIVM'] 110684 8722 TGCCQRAPD True PC9_epitope_Rep2 949.3745856283698 949.37348993586 38.911 2 -2.3355941571622196 0.46511529645396066 1.0 ['ENSG00000204140|ENST00000373861|CLPSL1'] 79487 20559 PAYLDSHS True NCI_RA007_Epitope_Rep4 888.3977465177602 888.39664993586 89.044 2 -2.335661319719762 0.46511529645396066 1.0 ['ENST00000430355.5_1_3:185316235-185316268:+|nuORF'] 79091 23367 PALLVLLFC True PC9_epitope_Rep3 987.5827108364699 987.58160993586 95.161 2 -2.3357222694913915 0.46511529645396066 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.Q116Nfs*29|1|0.28|ENSG00000126259|chr19:35858540-35858540|C/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 40098 26627 HPVMGLIY True H1975_Epitope_Rep3 928.4840594243599 928.48296993586 111.19 2 -2.3357455913758574 0.46511529645396066 1.0 ['LRP5|p.M473I|1|0.18|ENSG00000162337|chr11:68389887-68389887|G/T|missense_variant'] 125518 7715 VKDAMQRTL True NCI_RA007_Epitope_Rep3 1060.5699143066402 1060.5688099358601 37.469 2 -2.335989198361801 0.46511677035691273 1.0 ['ENST00000548783.1_1_12:77252724-77253344:-|nuORF'] 104631 22009 SQSSVKKA True PC9_epitope_Rep4 833.4606811274899 833.45958993586 92.878 2 -2.3361046989304386 0.46511677035691273 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 112051 10554 TISVFEPIERN True H1975_Epitope_Rep1 1303.67721582615 1303.67610993586 45.55 2 -2.336123096160032 0.46511677035691273 1.0 ['ENSG00000183690|ENST00000420999|EFHC2', 'EFHC2|p.G511Wfs*17|1|0.22|ENSG00000183690|chrX:44232571-44232572|-/G|frameshift_variant'] 130338 12022 VSKLPTLRSL True PC9_epitope_Rep4 1112.69174369148 1112.6906499358602 54.043 2 -2.3361315882480707 0.46511677035691273 1.0 ['ENST00000415817.1_1_22:21351478-21351634:+|nuORF', 'ENST00000498649.1_1_22:21351132-21351634:+|nuORF', 'ENST00000479606.5_1_22:21333956-21351634:+|nuORF', 'ENSG00000099949|ENST00000646124|LZTR1'] 8463 5274 ATQLLDPYM True PC9_epitope_Rep2 1050.50558271458 1050.5044899358602 25.675 2 -2.3370836961082126 0.4651541077803832 1.0 ['ENST00000571846.5_2_17:7761168-7761255:+|nuORF'] 124896 17536 VHPFHLLV True NCI_RA007_Epitope_Rep3 960.5545219426799 960.55342993586 76.945 2 -2.3373326621953763 0.4651548438886307 1.0 ['CON__Q3SZH5'] 82324 22057 PPIMLIGH True PC9_epitope_Rep5 876.4891448047999 876.48804993586 89.869 2 -2.3373558181169307 0.4651548438886307 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 80284 17931 PGEIVSLGIL True H1975_Epitope_Rep1 996.5855472874399 996.58444993586 74.688 2 -2.337444680508141 0.4651555799657787 1.0 ['nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 97025 22244 SCKSEFLKK True NCI_RA007_Epitope_Rep5 1068.56376629704 1068.5626699358602 92.708 2 -2.3374925011613428 0.4651555799657787 1.0 ['ENSG00000101230|ENST00000262487|ISM1'] 105523 8822 SSALLAHP True H1975_Epitope_Rep2 794.42865272322 794.42810496793 38.9 1 -2.337923558157633 0.46516122899481405 1.0 ['ENST00000571487.5_1_16:70497084-70500964:+|nuORF', 'ENST00000464499.5_1_16:70497084-70500964:+|nuORF'] 121617 6426 VFGNVTAV True NCI_RA007_Epitope_Rep2 805.4334037504899 805.43230993586 29.601 2 -2.3389706855010965 0.4652302492606675 1.0 ['KCNH8|p.I472V|1|0.15|ENSG00000183960|chr3:19450144-19450144|A/G|missense_variant'] 84785 15680 QDVPLGEKI True H1975_Epitope_Rep1 997.54441075145 997.54330993586 65.601 2 -2.3392882364000678 0.4652415453834942 1.0 ['KDM1B|p.A576Hfs*3|1|0.12|ENSG00000165097|chr6:18221942-18221942|G/-|frameshift_variant', 'ENSG00000165097|ENST00000650836|KDM1B'] 29943 22587 FWARYHQN True H1975_Epitope_Rep1 1120.52026169228 1120.5191699358602 93.941 2 -2.339304987369092 0.4652415453834942 1.0 ['ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000494718.5_1_X:51643260-51645023:+|nuORF'] 125550 17949 VKKAVPKEDI True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 75.826 3 -2.34045926397618 0.46525922249094387 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 102718 24751 SMFAHAPL True PC9_epitope_Rep3 872.4214591678 872.42036993586 100.58 2 -2.3405205571694623 0.46525922249094387 1.0 ['nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA'] 86535 14153 QLCYRHKRRKF True PC9_epitope_Rep2 1533.8463043536096 1533.84466490379 59.709 3 -2.340654659590796 0.46525922249094387 1.0 ['ENST00000510885.2_1_4:57459440-57459704:+|nuORF'] 25845 8959 FFFFPFREEME True NCI_RA007_Epitope_Rep1 1524.674773298 1524.67366993586 38.849 2 -2.340657238591019 0.46525922249094387 1.0 ['ENST00000489613.1_1_2:234294779-234297133:+|nuORF'] 88515 6939 QSWLRHDRRRW True NCI_RA007_Epitope_Rep1 1594.8341594467797 1594.8325049037899 30.994 3 -2.3407522873007753 0.46525922249094387 1.0 ['ENSG00000174010|ENST00000328046|KLHL15', 'KLHL15|p.V384*|1|0.58|ENSG00000174010|chrX:23988586-23988586|C/-|frameshift_variant'] 135047 24307 WDSSKGTI True H1975_Epitope_Rep3 892.42904664604 892.4279499358599 101.23 2 -2.3414141373917956 0.46529237203113283 1.0 ['CD8B|p.A76S|1|0.53|ENSG00000172116|chr2:86858234-86858234|C/A|missense_variant'] 127505 21684 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 90.509 2 -2.341794173387049 0.46529237203113283 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 122728 6569 VGGISGGSGH True PC9_epitope_Rep5 826.39332984366 826.39222993586 30.238 2 -2.3420265198647052 0.46529237203113283 1.0 ['PPP1R10|p.G804V|1|0.63|ENSG00000204569|chr6:30602238-30602238|C/A|missense_variant'] 99271 15609 SHQNMTES True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 66.749 2 -2.3422523997744515 0.46529237203113283 1.0 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000493238.1_1_3:149677832-149678888:+|nuORF', 'nc|ENSG00000082996|O43567-2|RNF13'] 49242 24829 KEPNSTIL True PC9_epitope_Rep2 900.4916469026 900.49054993586 101.19 2 -2.3432260230774307 0.46530857939424664 1.0 ['nc|ENSG00000071967|Q53TN4-3|CYBRD1', 'ENSG00000071967|ENST00000321348|CYBRD1'] 112310 25314 TKVLLALPT True PC9_epitope_Rep2 954.6113681124599 954.6108149679301 103.04 1 -2.3432530315811135 0.4653142259723528 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 69838 9109 LVGVAEDPV True PC9_epitope_Rep5 897.48074786573 897.47964993586 39.983 2 -2.3436232408455417 0.4653304327623714 1.0 ['PBLD|p.W221L|1|0.12|ENSG00000108187|chr10:68288512-68288512|C/A|missense_variant'] 99075 11458 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 50.721 2 -2.343642957557923 0.46533116499112953 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 61746 21879 LLAFAKNL True NCI_RA007_Epitope_Rep4 888.54328855264 888.54218993586 94.848 2 -2.34364856541669 0.46533116499112953 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 129704 19066 VRPQMETT True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 80.202 2 -2.3455655373980266 0.46540674655545583 1.0 ['ENST00000423112.2_1_9:3568814-3671485:+|nuORF'] 48841 26174 KDWLDYRMF True H1975_Epitope_Rep3 1272.59612905448 1272.59502993586 109.08 2 -2.3456485378698795 0.46540674655545583 1.0 ['ENST00000553666.1_1_14:92582502-92582559:-|nuORF'] 80725 20244 PHCPVFLG True PC9_epitope_Rep6 868.4265445482399 868.42544993586 90.552 2 -2.3458983909730766 0.46540674655545583 1.0 ['ENST00000558018.5_1_15:89442371-89442626:-|nuORF'] 99074 11200 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 49.715 2 -2.3460205108167416 0.46540674655545583 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 139042 19138 YLALLGEW True PC9_epitope_Rep6 963.50656869075 963.5060249679301 86.265 1 -2.3461387235942754 0.46540674655545583 1.0 ['SLIT2|p.W674L|1|0.15|ENSG00000145147|chr4:20541497-20541497|G/T|missense_variant'] 115989 22118 TSKPKDVD True PC9_epitope_Rep6 888.4552613938798 888.45416993586 98.019 2 -2.346348805499721 0.46540674655545583 1.0 ['CLIP4|p.P540Qfs*28|1|0.16|ENSG00000115295|chr2:29163915-29163916|CA/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 53096 16698 KPRLGCCG True NCI_RA007_Epitope_Rep3 832.4047635578399 832.40366993586 73.496 2 -2.3464238955997523 0.46540674655545583 1.0 ['SNX1|p.R431Pfs*28|1|0.48|ENSG00000028528|chr15:64134732-64134738|GCGGGAG/-|frameshift_variant'] 49698 21791 KGPSFCSS True PC9_epitope_Rep5 811.35343917763 811.35234993586 88.851 2 -2.3466969100628536 0.46540674655545583 1.0 ['ENSG00000203786|ENST00000606109|KPRP'] 120912 24561 VENRNGRKH True PC9_epitope_Rep2 1108.5849872071599 1108.58447496793 100.1 1 -2.346866013829435 0.46540674655545583 1.0 ['ENSG00000189108|ENST00000372582|IL1RAPL2'] 71088 7773 LYLFNWIWRYH True PC9_epitope_Rep5 1609.81940381609 1609.81774490379 34.842 3 -2.3470848008888674 0.46540674655545583 1.0 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 87960 14710 QRLRQERDRQY True NCI_RA007_Epitope_Rep3 1546.80766991542 1546.8065699358601 65.26 2 -2.3471977399122697 0.46540674655545583 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 99272 16423 SHQNMTES True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 69.926 2 -2.347256963248311 0.46540674655545583 1.0 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000493238.1_1_3:149677832-149678888:+|nuORF', 'nc|ENSG00000082996|O43567-2|RNF13'] 127501 19113 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 80.389 2 -2.3473452345144716 0.46540674655545583 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 31222 3655 GCQHLLAH True PC9_epitope_Rep5 877.42285615013 877.42174993586 19.147 2 -2.3474278703339397 0.46540674655545583 1.0 ['ENST00000266643.5_1_12:58150815-58152358:+|nuORF'] 20418 15920 EPEGGLKC True NCI_RA007_Epitope_Rep1 831.3796539254699 831.37854993586 66.024 2 -2.3474680502126586 0.46540674655545583 1.0 ['ENSG00000174292|ENST00000688331|TNK1', 'nc|ENSG00000174292|Q13470|TNK1'] 99023 5200 SHEDMLYPP True PC9_epitope_Rep1 1087.46444617859 1087.4633499358602 24.852 2 -2.347508644744273 0.46540674655545583 1.0 ['ENSG00000258890|ENST00000556440|CEP95', 'nc|ENSG00000258890|Q96GE4-2|CEP95', 'ENST00000553956.6_1_17:62510355-62528036:+|nuORF'] 102831 16748 SNQFVPFN True NCI_RA007_Epitope_Rep4 951.4450310633499 951.44392993586 72.604 2 -2.3478562867204222 0.46540674655545583 1.0 ['ENSG00000106546|ENST00000242057|AHR', 'AHR|p.C764*|1|0.12|ENSG00000106546|chr7:17340116-17340153|GTTATGCTGGGGCCGTGTCGATGTATCAGTGCCAGCCA/-|frameshift_variant'] 23161 19768 EVLCKNLA True NCI_RA007_Epitope_Rep1 888.4738886634799 888.47278993586 81.078 2 -2.3479443497718857 0.46540674655545583 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 79583 12733 PDHGSSTI True NCI_RA007_Epitope_Rep5 812.3664463894801 812.36534993586 55.643 2 -2.3481031513567827 0.46540674655545583 1.0 ['ENSG00000182621|ENST00000338037|PLCB1', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1'] 11098 22354 DCPDGYDE True H1975_Epitope_Rep2 912.28072772984 912.27962993586 92.379 2 -2.3487190472528847 0.465419495148911 1.0 ['LRP1B|p.I4203Lfs*11|1|0.28|ENSG00000168702|chr2:140321997-140321997|C/-|frameshift_variant', 'LRP1B|p.T4455Ifs*2|1|0.39|ENSG00000168702|chr2:140239493-140239493|G/-|frameshift_variant', 'LRP1B|p.A4445Cfs*24|1|0.23|ENSG00000168702|chr2:140239524-140239525|-/A|frameshift_variant', 'ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.H3296Qfs*8|1|0.11|ENSG00000168702|chr2:140456530-140456531|-/T|frameshift_variant', 'LRP1B|p.C3774Mfs*9|1|0.09|ENSG00000168702|chr2:140358054-140358055|-/T|frameshift_variant', 'LRP1B|p.M3926Wfs*9|1|0.34|ENSG00000168702|chr2:140350914-140350914|C/-|frameshift_variant', 'LRP1B|p.R2486Efs*2|1|0.46|ENSG00000168702|chr2:140541030-140541030|T/-|frameshift_variant', 'LRP1B|p.I1892Nfs*4|1|0.17|ENSG00000168702|chr2:140769298-140769299|-/C|frameshift_variant', 'LRP1B|p.P1164Lfs*15|1|0.3|ENSG00000168702|chr2:140907906-140907906|G/-|frameshift_variant', 'LRP1B|p.L1245Pfs*6|1|0.09|ENSG00000168702|chr2:140902952-140902953|-/G|frameshift_variant', 'LRP1B|p.H112Q|1|0.1|ENSG00000168702|chr2:141480403-141480403|A/T|missense_variant', 'LRP1B|p.R3669Efs*87|1|0.36|ENSG00000168702|chr2:140370713-140370713|T/-|frameshift_variant'] 84134 7883 PYCGVEVW True H1975_Epitope_Rep2 951.4160394341899 951.41549496793 35.268 1 -2.3487874961436535 0.465419495148911 1.0 ['ENST00000595444.1_2_19:17417259-17417352:+|nuORF'] 3055 20128 AFSQRYCVCNP True PC9_epitope_Rep4 1286.5536126195 1286.5525099358601 85.557 2 -2.3488637382369117 0.465419495148911 1.0 ['nc|ENSG00000124313|Q5JU85-3|IQSEC2', 'ENSG00000124313|ENST00000642864|IQSEC2'] 52474 20733 KKVGVSSS True H1975_Epitope_Rep3 790.4548674710601 790.45376993586 86.634 2 -2.3489134911252987 0.465419495148911 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'ENST00000583545.1_1_17:61432467-61466989:+|nuORF'] 47633 5051 IWCRYYYPNVR True PC9_epitope_Rep2 1531.73943924323 1531.73779490379 24.799 3 -2.349664095042204 0.465419495148911 1.0 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3'] 79233 23335 PAPPIHMV True PC9_epitope_Rep4 860.45784467652 860.45674993586 98.017 2 -2.349918262824529 0.465419495148911 1.0 ['ENST00000263857.10_1_2:86252617-86252839:-|nuORF'] 94225 23451 RRPVDPRRR True PC9_epitope_Rep4 1206.71700443622 1206.71590993586 98.49 2 -2.3504374121283433 0.4654251388273052 1.0 ['nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2'] 125706 7766 VKQNSLYS True NCI_RA007_Epitope_Rep5 937.48689587533 937.48578993586 36.569 2 -2.350945416478882 0.4654329719515671 1.0 ['ENSG00000149231|ENST00000646818|CCDC82'] 36060 11252 GVAAKGKH True NCI_RA007_Epitope_Rep1 766.4449714937 766.4444249679301 47.764 1 -2.3509858276091173 0.4654329719515671 1.0 ['ENSG00000119138|ENST00000377126|KLF9'] 100013 15252 SIQHQRIH True PC9_epitope_Rep2 1017.54681079329 1017.54570993586 63.941 2 -2.3513293860166584 0.4654329719515671 1.0 ['ENSG00000251247|ENST00000420450|ZNF345'] 60608 18138 LHHGPLCL True H1975_Epitope_Rep3 888.46399268612 888.46288993586 76.006 2 -2.351705192642036 0.4654329719515671 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.G351Vfs*12|1|0.13|ENSG00000168453|chr8:22127390-22127390|C/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 56412 8423 LDEDLLGPG True NCI_RA007_Epitope_Rep2 927.4549270407099 927.45382993586 37.405 2 -2.3517196654214043 0.4654329719515671 1.0 ['ENST00000526878.5_1_11:460175-490579:+|nuORF', 'ENSG00000174915|ENST00000308020|PTDSS2'] 29244 19881 FTVVLILLKMY True NCI_RA007_Epitope_Rep4 1338.7985172591398 1338.79687490379 85.935 3 -2.3518793297061378 0.4654329719515671 1.0 ['ENSG00000184454|ENST00000374392|NCMAP'] 61208 5280 LILLALHRAKK True PC9_epitope_Rep3 1274.8550610488198 1274.85396993586 25.389 2 -2.3520428515485143 0.4654329719515671 1.0 ['nc|ENSG00000184307|Q8IYP9|ZDHHC23', 'ENSG00000184307|ENST00000638807|ZDHHC23'] 101106 16009 SLGLAVARDE True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 66.834 2 -2.35252710398402 0.46543934467761683 1.0 ['ENST00000586790.5_1_19:56159538-56160159:+|nuORF'] 98639 5482 SFYIYRLYWW True H1975_Epitope_Rep1 1495.72885747619 1495.72720490379 26.147 3 -2.3527127858035928 0.46543934467761683 1.0 ['DCAF15|p.H108R|1|0.16|ENSG00000132017|chr19:13954618-13954618|A/G|missense_variant'] 82996 21551 PSGHTTGH True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 89.159 2 -2.3527589336419976 0.46543934467761683 1.0 ['ENSG00000147206|ENST00000395065|NXF3', 'NXF3|p.E411Sfs*3|1|0.78|ENSG00000147206|chrX:103079463-103079463|C/-|frameshift_variant'] 123592 9851 VGQAGGKA True H1975_Epitope_Rep3 686.3711378470999 686.3705849679301 42.921 1 -2.3532315159044965 0.46544498749115937 1.0 ['nc|ENSG00000132199|Q7L5Y1-3|ENOSF1', 'ENST00000251101.11_1_18:691232-697243:-|nuORF'] 68955 22193 LTPEFLEKH True PC9_epitope_Rep4 1112.5866099165999 1112.58550993586 93.611 2 -2.3532973703928395 0.46544571700005277 1.0 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 15579 7709 EAQPQLLDLRI True H1975_Epitope_Rep3 1294.7245003717399 1294.7234099358602 34.636 2 -2.3534483001774444 0.46544571700005277 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 82634 24455 PQKTDHPS True H1975_Epitope_Rep1 908.4351946556399 908.43408993586 101.37 2 -2.3538140275527217 0.46544644647814476 1.0 ['ENSG00000184371|ENST00000329608|CSF1'] 142390 13508 YYELWWFWLLW True NCI_RA007_Epitope_Rep2 1703.8176724805896 1703.8165699358601 57.188 2 -2.3538444489511763 0.46544644647814476 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 52887 15605 KPGDKIRST True NCI_RA007_Epitope_Rep4 1000.56654317836 1000.56544993586 67.785 2 -2.3546558683099503 0.4654731997720028 1.0 ['ENST00000349215.7_1_11:18339453-18343686:-|nuORF', 'ENST00000396253.7_1_11:18333561-18343686:-|nuORF'] 136616 22360 WWPMKAQNL True PC9_epitope_Rep4 1172.5800850675198 1172.5789899358601 94.242 2 -2.3547682382065895 0.46547957061884504 1.0 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 23102 21914 EVIRLSLFSKS True H1975_Epitope_Rep1 1277.73433677945 1277.7332299358602 91.144 2 -2.355087436570506 0.46547957061884504 1.0 ['ENSG00000130758|ENST00000253055|MAP3K10', 'MAP3K10|p.E300Gfs*6|1|0.34|ENSG00000130758|chr19:40204513-40204514|-/C|frameshift_variant'] 109081 24384 TALKKGLSTE True H1975_Epitope_Rep3 1046.5971746003 1046.5960699358602 101.52 2 -2.355127617962784 0.46547957061884504 1.0 ['LRRC41|p.Q100E|1|0.1|ENSG00000132128|chr1:46297622-46297622|G/C|missense_variant'] 86464 5322 QKRHKNRFWI True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 25.86 3 -2.355472550845742 0.46550432185412294 1.0 ['ENST00000303329.8_1_15:80888135-80888297:+|nuORF'] 61630 21160 LKPKTTYA True NCI_RA007_Epitope_Rep5 920.53311779176 920.53202993586 88.417 2 -2.355964881367657 0.46550432185412294 1.0 ['NCAM1|p.E579K|1|0.29|ENSG00000149294|chr11:113235074-113235074|G/A|missense_variant'] 126141 25049 VLFASSHT True PC9_epitope_Rep5 860.43921740692 860.43812993586 101.49 2 -2.3561065673147517 0.46550432185412294 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 69588 14734 LVDMAKKL True H1975_Epitope_Rep1 916.54157430048 916.54046993586 61.896 2 -2.356534757544032 0.46550432185412294 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 35281 22194 GRGQVKKG True PC9_epitope_Rep2 828.4929843152798 828.49188993586 90.854 2 -2.35675457939244 0.46550432185412294 1.0 ['nc|ENSG00000135597|Q96D71-2|REPS1', 'nc|ENSG00000135597|Q96D71-4|REPS1', 'nc|ENSG00000135597|Q96D71-3|REPS1', 'ENSG00000135597|ENST00000450536|REPS1'] 125894 24877 VLATTVKKL True NCI_RA007_Epitope_Rep5 971.6379172134699 971.63682993586 103.18 2 -2.3568477567458705 0.46550432185412294 1.0 ['ENSG00000123104|ENST00000381340|ITPR2', 'ITPR2|p.W1578Lfs*12|1|0.5|ENSG00000123104|chr12:26561850-26561851|-/A|frameshift_variant', 'ITPR2|p.I1830Hfs*5|1|0.28|ENSG00000123104|chr12:26487134-26487135|-/G|frameshift_variant'] 122979 6763 VGHVGAPI True NCI_RA007_Epitope_Rep4 748.42317341996 748.42206993586 32.633 2 -2.3569322761619715 0.46550432185412294 1.0 ['ENST00000477184.5_1_7:102122979-102123225:-|nuORF'] 69407 12804 LTWPPGSP True H1975_Epitope_Rep2 853.4334037504899 853.4328549679301 54.358 1 -2.3573772929111034 0.46550432185412294 1.0 ['ENST00000422370.2_1_19:45647868-45648611:+|nuORF'] 104393 23307 SQKSSVKELLK True PC9_epitope_Rep2 1245.7292513990099 1245.72814993586 95.126 2 -2.357382470970858 0.46550432185412294 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 99073 19427 SHGPCVPP True H1975_Epitope_Rep2 792.35885891124 792.35776993586 80.633 2 -2.357412211968921 0.46550432185412294 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 94279 23726 RRRFLELINL True NCI_RA007_Epitope_Rep3 1328.8040881051197 1328.80298993586 102.85 2 -2.3576845984787123 0.46552051671732525 1.0 ['ENST00000437750.2_1_11:20429511-20429577:+|nuORF'] 89945 24197 RDAEDDGEEED True H1975_Epitope_Rep2 1278.4483976597799 1278.4473099358602 99.608 2 -2.3578939494028517 0.4655367112386943 1.0 ['nc|ENSG00000143401|Q9BTT0-3|ANP32E', 'ENSG00000143401|ENST00000583931|ANP32E', 'nc|ENSG00000143401|Q9BTT0-2|ANP32E'] 132614 23581 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 97.194 2 -2.3585534595173803 0.4655423517740676 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 80618 22264 PGRQKIHI True NCI_RA007_Epitope_Rep5 947.5664836087099 947.56538993586 92.786 2 -2.3590657247999034 0.46557546592372145 1.0 ['ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000491035.5_1_X:153628724-153629192:+|nuORF'] 31159 20606 GAWGGGGGP True H1975_Epitope_Rep1 714.3085375905399 714.3079849679301 85.677 1 -2.359292464159035 0.46557546592372145 1.0 ['ENST00000584573.5_1_17:61699921-61700077:+|nuORF'] 83560 704 PVAALKAK True NCI_RA007_Epitope_Rep1 796.5170738048 796.51596993586 3.7387 2 -2.3595061716154926 0.46557546592372145 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 82810 20351 PRRRRRREER True NCI_RA007_Epitope_Rep5 1465.85629187369 1465.85464490379 85.218 3 -2.3595784470319026 0.46557546592372145 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 111487 23453 THWPDHKG True PC9_epitope_Rep2 976.45151342612 976.45040993586 95.683 2 -2.3596123092451435 0.4655811057524879 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19', 'nc|ENSG00000172046|O94966-4|USP19', 'nc|ENSG00000172046|O94966-3|USP19', 'nc|ENSG00000172046|O94966-7|USP19', 'ENSG00000172046|ENST00000417901|USP19'] 72194 18315 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 77.249 2 -2.3597169283996706 0.46558674546222034 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'NDST4|p.H558Tfs*41|1|0.23|ENSG00000138653|chr4:114870815-114870815|G/-|frameshift_variant', 'ENSG00000138653|ENST00000264363|NDST4', 'ENSG00000164100|ENST00000296499|NDST3'] 99080 13809 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 59.791 2 -2.3598545163892064 0.46558747177138515 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 82995 20144 PSGHTTGH True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 83.476 2 -2.359972777029278 0.46558747177138515 1.0 ['ENSG00000147206|ENST00000395065|NXF3', 'NXF3|p.E411Sfs*3|1|0.78|ENSG00000147206|chrX:103079463-103079463|C/-|frameshift_variant'] 94243 20579 RRQKQLLNQR True NCI_RA007_Epitope_Rep1 1338.7956486797398 1338.79454993586 84.271 2 -2.3602906237052714 0.4655987505803892 1.0 ['ENSG00000138100|ENST00000380075|TRIM54', 'nc|ENSG00000138100|Q9BYV2-2|TRIM54'] 111364 20991 THRGPAKH True H1975_Epitope_Rep3 902.48348226074 902.4823899358599 87.672 2 -2.360613729150572 0.4655987505803892 1.0 ['nc|ENSG00000102935|Q2M1K9-2|ZNF423', 'nc|ENSG00000102935|Q2M1K9|ZNF423', 'ENSG00000102935|ENST00000563137|ZNF423'] 53090 24850 KPQLLIFSRRK True NCI_RA007_Epitope_Rep1 1384.86668836168 1384.86558993586 102.86 2 -2.3606736805636177 0.4656043898063631 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'ENST00000571307.1_1_17:5433304-5487319:-|nuORF'] 118847 19080 VAARQCVP True PC9_epitope_Rep2 842.4432572415399 842.44214993586 78.756 2 -2.361000195689236 0.46562058122111305 1.0 ['ENSG00000198650|ENST00000355962|TAT'] 41546 26737 HYRKVHEG True H1975_Epitope_Rep1 1024.5202616922797 1024.5191699358602 111.34 2 -2.361165003567532 0.4656586014413996 1.0 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP', 'ENST00000532860.1_1_11:119003556-119003957:+|nuORF', 'nc|ENSG00000172273|Q9BQA5-2|HINFP'] 110271 17846 TERWFVLK True PC9_epitope_Rep6 1077.5971150306498 1077.5960099358601 81.274 2 -2.3612039188487146 0.4656586014413996 1.0 ['ENSG00000133789|ENST00000318950|SWAP70', 'SWAP70|p.R376Pfs*52|1|0.18|ENSG00000133789|chr11:9738259-9738259|G/-|frameshift_variant', 'ENST00000524817.5_1_11:9685687-9762009:+|nuORF', 'ENST00000534562.1_1_11:9749605-9771962:+|nuORF'] 53 14308 AAAGGPWE True NCI_RA007_Epitope_Rep1 757.33950336565 757.33895496793 59.693 1 -2.361302520588033 0.4656586014413996 1.0 ['ENST00000578759.1_1_17:60217316-60217976:-|nuORF'] 74314 6753 NELGFPRVI True PC9_epitope_Rep2 1043.57637958607 1043.5752899358602 31.382 2 -2.361575059126019 0.4656698779162402 1.0 ['SETD2|p.R540Pfs*7|1|0.63|ENSG00000181555|chr3:47123016-47123017|TC/-|frameshift_variant'] 32719 20607 GGVSAKGK True PC9_epitope_Rep2 702.4024379753799 702.4018849679301 84.698 1 -2.361633903697616 0.4656698779162402 1.0 ['ENST00000505973.1_1_2:27805995-27824299:+|nuORF', 'nc|ENSG00000243943|Q96ME7-2|ZNF512', 'nc|ENSG00000243943|Q96ME7-3|ZNF512', 'ENSG00000243943|ENST00000355467|ZNF512'] 72422 25277 MKLWKKRW True PC9_epitope_Rep2 1174.6797395391397 1174.6786499358602 102.9 2 -2.362409873655017 0.465707170894357 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5'] 94253 24008 RRQRQRQW True PC9_epitope_Rep5 1212.6700542437998 1212.6689499358602 97.33 2 -2.362707053384247 0.46571280850031127 1.0 ['ENST00000247706.3_1_19:17411946-17414055:-|nuORF'] 103382 21963 SPPHIPGP True H1975_Epitope_Rep3 800.41808803952 800.41698993586 91.811 2 -2.363683566490594 0.4657395488214067 1.0 ['nc|ENSG00000166199|Q96Q83-2|ALKBH3'] 102676 721 SLYMDRIFFV True NCI_RA007_Epitope_Rep5 1289.6478302741698 1289.64619490379 4.1217 3 -2.3638994227402703 0.46574027179876765 1.0 ['ENST00000389682.7_1_2:122523087-122523240:+|nuORF'] 10309 3394 CDMDRLTS True PC9_epitope_Rep6 939.37900230247 939.37790993586 19.202 2 -2.364192297719214 0.46574027179876765 1.0 ['TBR1|p.P409S|1|0.33|ENSG00000136535|chr2:161423403-161423403|C/T|missense_variant'] 61220 23710 LILSWFLAFLS True PC9_epitope_Rep3 1308.7481959384397 1308.7465649037902 96.485 3 -2.364416864291296 0.46574590881754013 1.0 ['ENST00000443016.1_1_10:11607160-11607337:-|nuORF'] 36243 16849 GVDLTVRVL True PC9_epitope_Rep4 970.58113061334 970.58002993586 72.791 2 -2.3651563829123767 0.46576209668910507 1.0 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3'] 49697 21773 KGPSFCSS True PC9_epitope_Rep1 811.35343917763 811.35234993586 88.581 2 -2.365222379688946 0.4657677333586554 1.0 ['ENSG00000203786|ENST00000606109|KPRP'] 134635 20124 VYSPNMRWI True PC9_epitope_Rep4 1164.5749996870798 1164.57390993586 85.542 2 -2.365499635166735 0.46576845570314723 1.0 ['nc|ENSG00000133805|Q01432-3|AMPD3', 'ENSG00000133805|ENST00000396553|AMPD3', 'nc|ENSG00000133805|Q01432-5|AMPD3', 'nc|ENSG00000133805|Q01432-4|AMPD3', 'ENST00000534047.5_1_11:10503676-10517278:+|nuORF', 'nc|ENSG00000133805|Q01432-6|AMPD3'] 786 25777 AAVVKRTG True PC9_epitope_Rep2 800.48683630568 800.48628496793 104.88 1 -2.36583957044979 0.46576845570314723 1.0 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000505447.5_1_4:7765494-7780765:-|nuORF'] 73537 23878 MVPLLMRK True H1975_Epitope_Rep2 986.57691426338 986.57580993586 98.357 2 -2.366001506415455 0.46576917801715495 1.0 ['ENST00000265433.7_1_8:90993651-90993702:-|nuORF'] 38097 23610 HAWKGYRK True NCI_RA007_Epitope_Rep3 1044.5617325814399 1044.56062993586 102.4 2 -2.366027240243154 0.46576917801715495 1.0 ['ENSG00000177239|ENST00000371589|MAN1B1'] 6955 18356 AQKLSEIHK True NCI_RA007_Epitope_Rep1 1052.59784330664 1052.59674993586 75.536 2 -2.3665820812232714 0.4657748143146523 1.0 ['ENSG00000174607|ENST00000310836|UGT8', 'UGT8|p.Q436E|1|0.37|ENSG00000174607|chr4:114675968-114675968|C/G|missense_variant'] 69479 24604 LVALRHLHF True NCI_RA007_Epitope_Rep5 1104.65563296628 1104.6545299358602 102.11 2 -2.367066029542837 0.46577553647163084 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'ENSG00000184304|ENST00000331968|PRKD1'] 70216 17437 LVQKVGFF True NCI_RA007_Epitope_Rep5 936.5432885526399 936.54218993586 73.855 2 -2.367116050443938 0.46577553647163084 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|2|fusion', 'RPS6KB1-VMP1|3|fusion', 'nc|ENSG00000062716|Q96GC9-2|VMP1', 'RPS6KB1-VMP1|2|fusion', 'RPS6KB1-VMP1|9|fusion', 'CLTC-VMP1|13|fusion', 'CLTC-VMP1|10|fusion', 'RPS6KB1-VMP1|6|fusion', 'RPS6KB1-VMP1|12|fusion', 'RPS6KB1-VMP1|4|fusion', 'RPS6KB1-VMP1|10|fusion', 'CLTC-VMP1|20|fusion', 'ENSG00000062716|ENST00000262291|VMP1'] 79609 20907 PDLEPSPQP True PC9_epitope_Rep1 978.46582607758 978.46472993586 85.239 2 -2.3674176889633607 0.4657811725236583 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'SYNE1|p.Q5331Nfs*35|1|0.07|ENSG00000131018|chr6:152321814-152321815|-/TTTTAGTTGAACATACTTGTTT|frameshift_variant', 'ENST00000471834.1_1_6:152657861-152688565:-|nuORF'] 52432 21128 KKRRHLTPT True PC9_epitope_Rep6 1135.69380938015 1135.6927099358602 94.114 2 -2.3678669855881274 0.46580790817403045 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 61520 23475 LKETDIKH True PC9_epitope_Rep6 982.54474510462 982.54364993586 103.41 2 -2.368046172271187 0.46581354376562684 1.0 ['MAP3K12|p.K398Sfs*10|1|0.61|ENSG00000139625|chr12:53483979-53483979|A/-|frameshift_variant', 'MAP3K12|p.I490Sfs*29|1|0.13|ENSG00000139625|chr12:53483396-53483396|A/-|frameshift_variant', 'MAP3K12|p.S536Hfs*45|1|0.22|ENSG00000139625|chr12:53483099-53483099|G/-|frameshift_variant', 'nc|ENSG00000139625|Q12852|MAP3K12', 'ENSG00000139625|ENST00000547488|MAP3K12', 'ENST00000547020.1_1_12:53880221-53880452:-|nuORF'] 112286 26196 TKSKKGAK True PC9_epitope_Rep5 846.5287011176598 846.52760993586 106.51 2 -2.3685967226372373 0.4658191792383163 1.0 ['MAGEB2|p.D251Ifs*36|1|0.42|ENSG00000099399|chrX:30219331-30219331|G/-|frameshift_variant', 'ENSG00000099399|ENST00000378988|MAGEB2'] 66332 7127 LSGAAKQP True PC9_epitope_Rep2 770.42865272322 770.42754993586 32.807 2 -2.36917380675827 0.4658248145921026 1.0 ['nc|ENSG00000164616|Q9UKT6|FBXL21P'] 33316 23610 GKPNKRRGF True PC9_epitope_Rep3 1058.6097454030198 1058.60864993586 96.102 2 -2.3695284108491865 0.46584099924044226 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 120992 6182 VEPRKQDA True PC9_epitope_Rep2 941.4930438849298 941.49194993586 29.169 2 -2.3696349123840155 0.46584663424514466 1.0 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF', 'ENST00000557880.2_1_15:80236959-80237118:+|nuORF', 'ENST00000487002.1_1_1:155279855-155282231:+|nuORF', 'ENST00000399474.2_1_X:44335819-44336572:-|nuORF'] 56050 19919 LASVGKKP True PC9_epitope_Rep2 798.49633836022 798.49524993586 82.015 2 -2.370258963276547 0.46591772151898736 1.0 ['ENSG00000165359|ENST00000639893|INTS6L', 'nc|ENSG00000165359|Q5JSJ4|INTS6L'] 43145 5020 IFDMKKWDQFY True PC9_epitope_Rep6 1519.71697246315 1519.7153249037901 26.934 3 -2.37038234015733 0.46591772151898736 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7', 'nc|ENSG00000156096|P06133-3|UGT2B4', 'nc|ENSG00000156096|P06133-2|UGT2B4', 'ENSG00000156096|ENST00000305107|UGT2B4'] 129009 10453 VQLLPRCP True NCI_RA007_Epitope_Rep4 924.5215075622399 924.52095496793 47.057 1 -2.370386985644026 0.46591772151898736 1.0 ['ENST00000496385.5_1_22:26849136-26861668:-|nuORF', 'ENST00000464362.5_1_22:26849201-26861668:-|nuORF'] 43644 24591 IHAVCGKN True NCI_RA007_Epitope_Rep1 840.4276071774 840.4265099358599 101.85 2 -2.370473374245091 0.46591772151898736 1.0 ['ENST00000477995.1_1_6:170176000-170181606:+|nuORF', 'nc|ENSG00000130023|Q5T6L9-4|ERMARD', 'nc|ENSG00000130023|Q5T6L9-2|ERMARD', 'nc|ENSG00000130023|Q5T6L9-3|ERMARD', 'ENSG00000130023|ENST00000366773|ERMARD'] 785 25612 AAVVKRTG True PC9_epitope_Rep2 800.48683630568 800.48628496793 104.2 1 -2.3708107964048937 0.46591772151898736 1.0 ['nc|ENSG00000196526|Q8N556|AFAP1', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000505447.5_1_4:7765494-7780765:-|nuORF'] 37737 23723 GWNPHLLLLL True NCI_RA007_Epitope_Rep4 1174.68626438822 1174.6851699358601 102.87 2 -2.3711907872072677 0.46591772151898736 1.0 ['IL21R|p.G372Afs*8|1|0.12|ENSG00000103522|chr16:27448780-27448780|G/-|frameshift_variant', 'ENSG00000103522|ENST00000337929|IL21R'] 36398 18661 GVFLLGDRLY True PC9_epitope_Rep4 1151.6338944621898 1151.63278993586 79.857 2 -2.3712085947217143 0.46591772151898736 1.0 ['KLHL1|p.C696F|1|0.26|ENSG00000150361|chr13:69707725-69707725|C/A|missense_variant'] 63203 20282 LLRYSGEFV True PC9_epitope_Rep2 1082.5760452329 1082.57494993586 83.436 2 -2.3716557683201858 0.4659339036508054 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 80304 19062 PGFPSGVH True NCI_RA007_Epitope_Rep3 796.3867879112399 796.38568993586 83.272 2 -2.371978958688601 0.4659564368967881 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 82342 20761 PPKRGGPC True PC9_epitope_Rep4 810.4170424936998 810.41649496793 88.012 1 -2.372102327146462 0.4659564368967881 1.0 ['ENST00000598782.1_1_19:4785174-4785513:-|nuORF'] 78796 24074 PAAQLAGR True NCI_RA007_Epitope_Rep2 782.43988611326 782.43878993586 101.14 2 -2.3721170217491663 0.4659564368967881 1.0 ['ENST00000481918.1_1_1:213186656-213188829:-|nuORF'] 126677 22677 VLPAAQLR True PC9_epitope_Rep3 866.5337864981 866.53268993586 92.499 2 -2.372241472250355 0.4659564368967881 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 8458 11951 ATQATRAACP True PC9_epitope_Rep2 988.4760139217998 988.47490993586 51.292 2 -2.3730494652403813 0.465972617766808 1.0 ['ENST00000240328.3_1_17:59485871-59486309:+|nuORF'] 89841 18093 RARAVVGP True H1975_Epitope_Rep3 824.4980696957199 824.49696993586 75.794 2 -2.37342197154441 0.4659993460398494 1.0 ['ENST00000582478.5_1_17:80008650-80008794:-|nuORF'] 89430 21030 QYDYYSSYFDI True PC9_epitope_Rep1 1462.5928770654998 1462.59124490379 85.721 3 -2.3739158281337422 0.4660106108069909 1.0 ['ENSG00000010270|ENST00000009041|STARD3NL', 'nc|ENSG00000010270|O95772-2|STARD3NL', 'ENST00000471550.1_1_7:38247105-38254853:+|nuORF'] 74080 14939 NDNPPTFLH True PC9_epitope_Rep5 1053.48795850449 1053.48686993586 62.467 2 -2.3739710507156135 0.4660106108069909 1.0 ['PCDHGA7|p.P453L|1|0.12|ENSG00000253537|chr5:141384257-141384257|C/T|missense_variant'] 132627 23127 VVFLIVPM True NCI_RA007_Epitope_Rep5 916.54559705176 916.54448993586 96.21 2 -2.374366488239398 0.46602187509888093 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 100551 16772 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 69.76 2 -2.3744300785522054 0.46602187509888093 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 123970 15970 VGSALPRR True NCI_RA007_Epitope_Rep3 854.50863437942 854.50752993586 70.491 2 -2.374661676336032 0.4660380542547357 1.0 ['ENST00000520709.5_1_8:92007907-92052988:-|nuORF', 'ENSG00000155099|ENST00000285419|PIP4P2'] 120450 11261 VEERAENF True NCI_RA007_Epitope_Rep1 992.4563240230399 992.45522993586 47.788 2 -2.37498849875131 0.4660436859924272 1.0 ['ENSG00000179008|ENST00000321731|C14orf39'] 102724 23610 SMKVKASS True H1975_Epitope_Rep1 836.4425885352 836.44203496793 98.052 1 -2.3757824256529374 0.4660704115425992 1.0 ['ENST00000418170.5_1_22:35660034-35689641:+|nuORF', 'ENSG00000100281|ENST00000216106|HMGXB4'] 123971 22268 VGSALPRR True PC9_epitope_Rep3 854.50863437942 854.50752993586 90.94 2 -2.376036613930914 0.46607604282022885 1.0 ['ENST00000520709.5_1_8:92007907-92052988:-|nuORF', 'ENSG00000155099|ENST00000285419|PIP4P2'] 49259 8048 KEQFRESEL True PC9_epitope_Rep3 1164.5775017848798 1164.57640993586 35.934 2 -2.3765085083601964 0.466092220722241 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 33048 26407 GILGGKDN True NCI_RA007_Epitope_Rep5 772.40791727864 772.4073649679301 109.18 1 -2.3768962626430925 0.46611965956190216 1.0 ['ENST00000400033.1_1_18:9104083-9104197:+|nuORF'] 103732 21026 SPVKKGSS True H1975_Epitope_Rep2 788.43921740692 788.43812993586 87.03 2 -2.376908454620368 0.46611965956190216 1.0 ['ENST00000234668.6_1_1:85647735-85666124:-|nuORF', 'nc|ENSG00000097096|Q5VT97-2|SYDE2', 'ENSG00000097096|ENST00000341460|SYDE2'] 113980 22203 TPAHHPPG True PC9_epitope_Rep6 812.3929359208399 812.39182993586 98.356 2 -2.37703377784179 0.46611965956190216 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 10451 5071 CICHSTYFL True H1975_Epitope_Rep1 1085.46742338405 1085.4663299358601 24.576 2 -2.377203218341709 0.46613583632145117 1.0 ['ENST00000517490.5_1_8:87570634-87570742:+|nuORF'] 81185 24895 PKGLPAKL True NCI_RA007_Epitope_Rep5 822.53272386894 822.53162993586 103.25 2 -2.3772504518583184 0.46613655058952563 1.0 ['ENSG00000170458|ENST00000302014|CD14'] 127923 21197 VPGVAFGD True PC9_epitope_Rep1 760.3755545212 760.37444993586 86.366 2 -2.3775358112804827 0.46613655058952563 1.0 ['PHF14|p.V560Ffs*61|1|0.26|ENSG00000106443|chr7:11036491-11036491|G/-|frameshift_variant', 'nc|ENSG00000106443|O94880-2|PHF14', 'ENST00000490957.5_1_7:11013950-11101713:+|nuORF', 'nc|ENSG00000106443|O94880-1|PHF14', 'ENSG00000106443|ENST00000634607|PHF14'] 113883 21857 TNQDLIRLVA True PC9_epitope_Rep6 1141.64552177505 1141.6444299358602 96.973 2 -2.3779602325788063 0.46615272665914387 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1'] 100552 16867 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 70.126 2 -2.378360124372427 0.4661549491797056 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 44229 8568 IKKLKRKPP True PC9_epitope_Rep2 1106.76518341526 1106.76408993586 38.317 2 -2.3785893755845207 0.4661549491797056 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 59032 25420 LEVQLKPKHQ True PC9_epitope_Rep3 1218.70845638478 1218.70734993586 103.22 2 -2.3788547237285784 0.4661549491797056 1.0 ['ENSG00000126391|ENST00000317568|FRMD8'] 102832 6607 SNQPEQFDWAI True NCI_RA007_Epitope_Rep2 1333.5938801250102 1333.59278993586 30.309 2 -2.379059527474844 0.4661549491797056 1.0 ['nc|ENSG00000197785|Q9NVI7-3|ATAD3A', 'ENSG00000197785|ENST00000378756|ATAD3A', 'nc|ENSG00000197785|Q9NVI7|ATAD3A'] 84101 1211 PWNWLDFTVI True H1975_Epitope_Rep2 1289.6444591458899 1289.64280490379 6.5545 3 -2.379099696440144 0.4661549491797056 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN2A|p.P1622Lfs*6|1|0.09|ENSG00000136531|chr2:165388668-165388668|C/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.D586Tfs*55|1|0.06|ENSG00000136531|chr2:165323239-165323239|G/-|frameshift_variant'] 31036 23082 GASVVAIDNK True NCI_RA007_Epitope_Rep4 972.52400966004 972.5234649679301 100.23 1 -2.3792694494383535 0.4661549491797056 1.0 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1', 'ENST00000487881.2_1_13:45010128-45010713:-|nuORF', 'nc|ENSG00000102804|Q15714-2|TSC22D1', 'ENSG00000157514|ENST00000372383|TSC22D3', 'nc|ENSG00000157514|Q99576|TSC22D3'] 132622 23399 VVFLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 97.67 2 -2.37942276415384 0.4661549491797056 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 37736 5295 GWLWRRRWSFF True NCI_RA007_Epitope_Rep5 1595.8262205320295 1595.82512993586 27.062 2 -2.3798159736839013 0.4661549491797056 1.0 ['ENST00000374500.9_1_6:33385885-33386053:-|nuORF'] 122249 23199 VGARGPRRRR True PC9_epitope_Rep2 1179.7173387893897 1179.71677496793 94.718 1 -2.3799632396994705 0.4661549491797056 1.0 ['ENST00000370210.3_2_X:152736080-152736602:-|nuORF'] 56210 9374 LCDLASPTA True PC9_epitope_Rep5 889.42151873745 889.4209649679301 41.011 1 -2.380074644924677 0.4661549491797056 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 49157 11868 KELENLDYLAF True NCI_RA007_Epitope_Rep2 1353.6816325002499 1353.67999490379 50.767 3 -2.380272524120697 0.4661549491797056 1.0 ['ENSG00000183230|ENST00000433211|CTNNA3', 'nc|ENSG00000183230|Q9UI47-2|CTNNA3', 'CTNNA3|p.E354Kfs*6|1|0.17|ENSG00000183230|chr10:66775513-66775513|T/-|frameshift_variant'] 17012 24036 EGDEDPCP True H1975_Epitope_Rep1 860.28581311028 860.28470993586 99.737 2 -2.3805635454943297 0.4661549491797056 1.0 ['ENSG00000188818|ENST00000283441|ZDHHC11'] 88520 5781 QSYVEEQKQLK True NCI_RA007_Epitope_Rep5 1378.70924423042 1378.70814993586 28.923 2 -2.380810463475489 0.4661549491797056 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 83384 24952 PTHPSLLT True PC9_epitope_Rep2 864.4705175352 864.46942993586 101.65 2 -2.3808818593132357 0.4661549491797056 1.0 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF'] 30727 10298 GALHTPPI True H1975_Epitope_Rep2 804.4493881678 804.44828993586 44.617 2 -2.380981757120802 0.4661549491797056 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 102336 16214 SLSSRARRPV True PC9_epitope_Rep2 1127.65233849099 1127.65124993586 67.614 2 -2.3818474313665634 0.4661549491797056 1.0 ['ENST00000530353.1_1_8:145980074-145980368:-|nuORF'] 69604 20566 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 86.046 2 -2.382225917749867 0.4661549491797056 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 72436 21613 MKPAIAPK True PC9_epitope_Rep4 854.5047948689399 854.50368993586 91.324 2 -2.3825558181722073 0.4661549491797056 1.0 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 41578 22948 IAAAYVRW True PC9_epitope_Rep1 948.51813643396 948.51702993586 93.07 2 -2.3825606141251 0.4661549491797056 1.0 ['ENST00000369492.4_1_1:116948662-116949561:-|nuORF'] 53280 23881 KQKQPRKKI True NCI_RA007_Epitope_Rep3 1152.7455105998397 1152.7438649037902 103.47 3 -2.3825868256905154 0.4661549491797056 1.0 ['ENST00000283195.10_1_2:109384301-109384340:+|nuORF'] 52501 19853 KKYINQEVL True PC9_epitope_Rep6 1133.6444591458899 1133.6433699358602 89.023 2 -2.382996517629678 0.4661549491797056 1.0 ['ENSG00000082293|ENST00000620364|COL19A1'] 48483 23613 KAFRRKLS True NCI_RA007_Epitope_Rep4 1004.6243328379999 1004.62322993586 102.43 2 -2.383091446671764 0.4661711213031789 1.0 ['ENSG00000196263|ENST00000308031|ZNF471', 'ENST00000593197.1_1_19:57021649-57037314:+|nuORF'] 78724 5590 PAAANVRK True PC9_epitope_Rep2 825.48208527841 825.48098993586 26.89 2 -2.383466716246002 0.4661774628879892 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 127926 11482 VPGVIRYK True PC9_epitope_Rep4 930.5650866263801 930.56398993586 51.927 2 -2.383549435538684 0.4661774628879892 1.0 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'ENST00000438989.1_1_2:20440380-20440515:-|nuORF'] 122715 6693 VGGGTREL True PC9_epitope_Rep5 787.41881631551 787.41770993586 30.717 2 -2.383567062984419 0.4661774628879892 1.0 ['ENST00000587406.5_1_19:19230741-19232328:-|nuORF'] 4100 19500 AHRPGDHQ True NCI_RA007_Epitope_Rep3 916.42636130744 916.42526993586 85.083 2 -2.3838880221572847 0.46621472023953864 1.0 ['ENST00000352397.9_1_22:43027442-43032826:-|nuORF'] 53544 17378 KRNGALLQ True NCI_RA007_Epitope_Rep2 898.5348491272598 898.53374993586 72.34 2 -2.3842060374796996 0.46624777286959823 1.0 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF', 'ENST00000555658.5_1_14:89730286-89817056:-|nuORF'] 80992 22552 PIILVLLDVFR True PC9_epitope_Rep3 1296.8169442045998 1296.8158499358601 92.015 2 -2.384674030361087 0.46624777286959823 1.0 ['ENST00000420415.5_2_3:195778645-195778717:-|nuORF'] 140514 17316 YRLTNAGYDYL True PC9_epitope_Rep6 1347.64591569787 1347.6448099358602 79.218 2 -2.3847548710466273 0.46624777286959823 1.0 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 127507 24331 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 101.04 2 -2.3847832647889122 0.46624777286959823 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 6701 14809 AQAKVLAP True NCI_RA007_Epitope_Rep4 796.4806882960798 796.47958993586 64.424 2 -2.3852531465027216 0.46626820989606393 1.0 ['ENSG00000135631|ENST00000486777|RAB11FIP5', 'nc|ENSG00000135631|Q9BXF6|RAB11FIP5', 'ENST00000493523.2_1_2:73302651-73316730:-|nuORF'] 28825 5966 FSWFWFRLYWF True H1975_Epitope_Rep1 1683.8026911227896 1683.8010449037902 28.019 3 -2.3856732900744375 0.46626820989606393 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 78811 7991 PAATSPSRAAP True PC9_epitope_Rep2 1024.5301576696397 1024.5290699358602 36.1 2 -2.3861689653629385 0.46626820989606393 1.0 ['ENST00000546324.1_1_11:73019312-73019516:-|nuORF'] 15578 7735 EAQPQLLDLRI True H1975_Epitope_Rep2 1294.7245003717399 1294.7234099358602 34.705 2 -2.3861734731402264 0.46626820989606393 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 81357 13441 PLCPLAHA True H1975_Epitope_Rep2 820.42654454824 820.42544993586 56.835 2 -2.3864473916687308 0.46626820989606393 1.0 ['ENST00000482847.5_1_9:116154440-116155869:-|nuORF', 'ENST00000464749.5_1_9:116153152-116155869:-|nuORF', 'ENST00000494848.1_1_9:116155725-116163557:-|nuORF', 'ENST00000468504.5_1_9:116152961-116155869:-|nuORF'] 30791 8485 GANAHGQA True H1975_Epitope_Rep3 724.32525028384 724.3247049679301 37.623 1 -2.386600489640573 0.46626820989606393 1.0 ['ENSG00000239388|ENST00000487349|ASB14'] 140689 8518 YRWLWWQPWWW True NCI_RA007_Epitope_Rep1 1791.8462872702696 1791.84463490379 37.134 3 -2.3866834058022226 0.46626820989606393 1.0 ['chr12:54282820-54283827|537|17.27|0.0|20.72|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 136801 6199 WYYYSLRFYST True NCI_RA007_Epitope_Rep2 1547.7085159544297 1547.7074099358601 28.72 2 -2.386778610620882 0.46626820989606393 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 129439 21118 VRGSAFAK True NCI_RA007_Epitope_Rep5 834.47118624154 834.47008993586 88.25 2 -2.3868056316163306 0.46626820989606393 1.0 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2', 'PHTF2|p.I186Mfs*11|1|0.44|ENSG00000006576|chr7:77908904-77908904|T/-|frameshift_variant', 'nc|ENSG00000006576|Q8N3S3-6|PHTF2', 'nc|ENSG00000006576|Q8N3S3-5|PHTF2', 'nc|ENSG00000006576|Q8N3S3-7|PHTF2', 'nc|ENSG00000006576|Q8N3S3-4|PHTF2'] 91263 13119 RGGRLPTP True NCI_RA007_Epitope_Rep4 852.49298431528 852.49188993586 57.56 2 -2.387191250258179 0.46626820989606393 1.0 ['ENST00000374490.7_1_1:24128417-24128612:-|nuORF'] 12520 24739 DKKEILKK True NCI_RA007_Epitope_Rep3 1000.6280808057599 1000.62698993586 106.98 2 -2.3872202205862774 0.46626820989606393 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 61742 22702 LLAFAKNL True NCI_RA007_Epitope_Rep1 888.54328855264 888.54218993586 93.088 2 -2.3873496927244546 0.46626820989606393 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 69602 20163 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 84.503 2 -2.38767527416427 0.46626820989606393 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 83436 6935 PTMTFISLFF True PC9_epitope_Rep1 1202.6045684798598 1202.6034699358602 31.482 2 -2.387907311167847 0.4662843770752738 1.0 ['ENST00000227155.8_1_11:44641386-44641557:+|nuORF'] 87650 19612 QQRQRRRLPP True NCI_RA007_Epitope_Rep4 1333.7803329687697 1333.77922993586 84.747 2 -2.388128703138699 0.4662900029514694 1.0 ['ENST00000298585.2_1_9:140476760-140476931:-|nuORF'] 73852 24168 NAPHSQGE True PC9_epitope_Rep2 838.35694433494 838.35584993586 98.489 2 -2.3887345057421783 0.46629071360809526 1.0 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 79495 20711 PCAWAAALL True PC9_epitope_Rep4 914.4684093602199 914.46730993586 87.828 2 -2.388873516695359 0.46629071360809526 1.0 ['ENST00000299954.13_1_17:65373938-65374277:+|nuORF'] 82874 24285 PRVIPNVH True NCI_RA007_Epitope_Rep5 930.5399345077001 930.53882993586 100.84 2 -2.3890542835360185 0.46630687986845293 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 80523 6825 PGPHGPNG True NCI_RA007_Epitope_Rep4 731.33508669155 731.33453496793 32.874 1 -2.389446102502669 0.46631813055347676 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 124757 16646 VHCRGGCS True NCI_RA007_Epitope_Rep3 817.33232689357 817.3317749679301 73.269 1 -2.3894647129113697 0.46631813055347676 1.0 ['ENSG00000146399|ENST00000275216|TAAR1'] 99077 12758 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 55.744 2 -2.389706897592253 0.46632938076416336 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 126674 22255 VLPAAQLR True H1975_Epitope_Rep3 866.5337864981 866.53268993586 93.067 2 -2.3898188389755677 0.46632938076416336 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 58150 8077 LEKQKRYE True PC9_epitope_Rep3 1092.5927579262 1092.5916699358602 36.044 2 -2.39011565969585 0.4663420495146552 1.0 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.K878Nfs*19|1|0.24|ENSG00000009954|chr7:73470443-73470443|C/-|frameshift_variant'] 69478 23536 LVALRHLHF True NCI_RA007_Epitope_Rep3 1104.65563296628 1104.6545299358602 102.11 2 -2.3901791689524403 0.4663420495146552 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'ENSG00000184304|ENST00000331968|PRKD1'] 93805 16683 RRAPFGRK True NCI_RA007_Epitope_Rep3 986.5886160356198 986.58750993586 73.433 2 -2.3902809185893976 0.4663420495146552 1.0 ['chr17:82237893-82238811|182|23.93|0.76|4.97|+|1|SLC16A3,SLC16A3|1'] 99076 11726 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 51.758 2 -2.390349186014771 0.4663420495146552 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 98159 7031 SESQGSGVFLP True PC9_epitope_Rep5 1106.5244035828598 1106.5233099358602 32.014 2 -2.3903741542900683 0.4663420495146552 1.0 ['ENSG00000173145|ENST00000371361|NOC3L'] 110579 13897 TFRQLQLFKH True NCI_RA007_Epitope_Rep2 1316.7353398389596 1316.7342499358601 58.71 2 -2.390441584052001 0.4663420495146552 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6'] 135252 14977 WFLWKQRDQRW True NCI_RA007_Epitope_Rep1 1647.8422645189899 1647.84116993586 62.32 2 -2.390753101372159 0.4663427589768452 1.0 ['ENST00000529107.5_2_17:72211823-72233491:+|nuORF', 'ENST00000269346.8_1_17:72209689-72233491:+|nuORF'] 104632 22743 SQSSVKKA True PC9_epitope_Rep5 833.4606811274899 833.45958993586 92.486 2 -2.390778959741912 0.4663427589768452 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 40679 19313 HRRARRERD True NCI_RA007_Epitope_Rep5 1250.6816815566597 1250.68058993586 81.163 2 -2.3914368278770493 0.4663800008431348 1.0 ['ENSG00000101493|ENST00000443185|ZNF516'] 104394 23225 SQKSSVKELLK True PC9_epitope_Rep3 1245.7292513990099 1245.72814993586 94.61 2 -2.392050127980765 0.4664179497718339 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 6423 18700 APRRFLLAA True PC9_epitope_Rep2 1013.6134338011298 1013.61232993586 77.301 2 -2.392436978520408 0.4664179497718339 1.0 ['ENST00000438404.5_2_21:40816571-40817638:-|nuORF', 'ENST00000358268.6_2_21:40801131-40817638:-|nuORF'] 55634 26342 LAKGPKYI True PC9_epitope_Rep3 888.54328855264 888.54274496793 107.58 1 -2.3927494451431484 0.4664179497718339 1.0 ['ENST00000206423.7_2_3:112318997-112319114:-|nuORF'] 37944 26514 HAAFLVPL True PC9_epitope_Rep5 866.5014237406599 866.50032993586 107.97 2 -2.3936203994938876 0.4664657280161875 1.0 ['LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 142785 15144 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 67.082 2 -2.3941911975202927 0.466492427994815 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 7615 16909 ASFWPFGP True H1975_Epitope_Rep2 907.4228390667898 907.42229496793 70.287 1 -2.39626114778644 0.46651352946135044 1.0 ['ENSG00000162009|ENST00000689027|SSTR5'] 131910 21117 VTRQPRNL True PC9_epitope_Rep2 982.5672118846999 982.56610993586 86.686 2 -2.396457619199766 0.46651352946135044 1.0 ['ENSG00000183475|ENST00000332783|ASB7'] 97108 13288 SDKLFEMV True H1975_Epitope_Rep2 967.4684689298699 967.46792496793 56.242 1 -2.3965768915058723 0.46651352946135044 1.0 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000486633.1_1_2:86400704-86422514:-|nuORF'] 73851 24354 NAPHSQGE True PC9_epitope_Rep1 838.35694433494 838.35584993586 98.507 2 -2.3967673010476975 0.46651352946135044 1.0 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 109373 17836 TCRQSEGP True NCI_RA007_Epitope_Rep5 876.3759655273599 876.37486993586 75.404 2 -2.3969288111231313 0.46651352946135044 1.0 ['ENST00000475488.3_1_7:149493482-149494663:+|nuORF'] 127506 21859 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 91.208 2 -2.3969743221621864 0.46651352946135044 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 90044 5759 RDWFRGRR True PC9_epitope_Rep2 1147.6111423853497 1147.6094849037902 27.546 3 -2.397310293165181 0.46651352946135044 1.0 ['ENST00000567745.5_1_15:71839748-72030507:+|nuORF'] 100550 16472 SLCCHCHS True PC9_epitope_Rep2 888.3040635404002 888.30296993586 68.602 2 -2.397431953252833 0.46651352946135044 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 82320 16551 PPIMLIGH True NCI_RA007_Epitope_Rep5 876.4891448047999 876.48804993586 70.424 2 -2.397843435274567 0.46651352946135044 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 80032 10190 PFGGGGAA True NCI_RA007_Epitope_Rep3 632.29182489724 632.29127496793 47.166 1 -2.398202952614531 0.46651352946135044 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 34196 16494 GNINAVHLK True NCI_RA007_Epitope_Rep3 964.54541381096 964.54430993586 72.675 2 -2.3983431140439553 0.46651352946135044 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 119595 11564 VATPGQVKE True PC9_epitope_Rep5 927.50254593947 927.50144993586 49.477 2 -2.398440819017813 0.46651352946135044 1.0 ['RNF14|p.L342Vfs*10|1|0.21|ENSG00000013561|chr5:141980309-141980310|-/G|frameshift_variant', 'ENSG00000013561|ENST00000394520|RNF14', 'nc|ENSG00000013561|Q9UBS8-2|RNF14'] 46135 21619 ISKMKPPV True PC9_epitope_Rep4 898.5310096167799 898.53046496793 91.347 1 -2.398468958367987 0.46651352946135044 1.0 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF', 'ENST00000496032.1_1_17:38347852-38349010:+|nuORF'] 72856 20322 MPPWRQLRKQ True H1975_Epitope_Rep2 1338.7342942931398 1338.73318993586 84.214 2 -2.398557913858038 0.46651352946135044 1.0 ['ENST00000370372.6_2_10:102045868-102046379:-|nuORF', 'ENST00000361832.2_1_10:102045868-102046416:-|nuORF'] 34737 25072 GQEPIVKKG True NCI_RA007_Epitope_Rep5 954.5498304850598 954.54872993586 103.94 2 -2.3985718325568546 0.46651352946135044 1.0 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 110257 21569 TERLASGVQV True NCI_RA007_Epitope_Rep5 1058.57202248162 1058.57092993586 90.052 2 -2.3989728517985953 0.46651915072967703 1.0 ['ENST00000438748.5_1_2:113299624-113300117:+|nuORF', 'ENST00000263331.9_1_2:113299748-113300117:+|nuORF'] 38879 23361 HHEGLIRLI True PC9_epitope_Rep6 1086.62981214126 1086.6287099358601 102.96 2 -2.399483645071742 0.46652547730433686 1.0 ['ENSG00000133789|ENST00000318950|SWAP70'] 132348 20521 VTYVPGGK True PC9_epitope_Rep5 819.4490538146298 819.44850496793 83.977 1 -2.399535309534012 0.46652547730433686 1.0 ['ENSG00000138722|ENST00000264790|MMRN1', 'nc|ENSG00000138722|Q13201-2|MMRN1'] 126785 25149 VLPLLPHA True H1975_Epitope_Rep3 858.53272386894 858.53217496793 104.62 1 -2.399622895136574 0.46652547730433686 1.0 ['nc|ENSG00000141552|Q9NYG5-2|ANAPC11'] 142241 15074 YWQDFVYLFMR True H1975_Epitope_Rep1 1566.7329568804596 1566.73184993586 63.233 2 -2.400601774837374 0.46657817388830947 1.0 ['ENST00000427755.2_1_11:33037501-33047701:+|nuORF'] 52748 24710 KMVKKAKT True PC9_epitope_Rep2 932.5841078187999 932.58355496793 100.73 1 -2.401159646774406 0.46657817388830947 1.0 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 112309 24851 TKVLLALPT True NCI_RA007_Epitope_Rep5 954.6113681124599 954.6108149679301 103.08 1 -2.401229544778459 0.46657817388830947 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 98583 15419 SFRWSLALSP True PC9_epitope_Rep2 1162.6134933707797 1162.6123899358602 64.588 2 -2.4012375363136975 0.46657817388830947 1.0 ['ENST00000477173.3_1_11:35006185-35041800:+|nuORF'] 3642 10132 AGPPLKID True H1975_Epitope_Rep3 809.46470387877 809.4641549679301 44.016 1 -2.401775817654752 0.46657817388830947 1.0 ['CAND1|p.S638P|1|0.27|ENSG00000111530|chr12:67305580-67305580|T/C|missense_variant'] 80305 18378 PGFPSGVH True NCI_RA007_Epitope_Rep4 796.3867879112399 796.38568993586 79.511 2 -2.4021705185416624 0.46657817388830947 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 128733 20770 VPYFIDLK True PC9_epitope_Rep6 993.5535188831699 993.55297496793 92.653 1 -2.4022162217046996 0.46657817388830947 1.0 ['nc|ENSG00000100997|Q8N2K0-3|ABHD12', 'ENSG00000100997|ENST00000339157|ABHD12', 'nc|ENSG00000100997|Q8N2K0-2|ABHD12'] 97020 17728 SCGSKSWV True NCI_RA007_Epitope_Rep5 852.37998827864 852.37888993586 74.971 2 -2.4024743409184337 0.46657817388830947 1.0 ['ENST00000533387.5_1_11:134130766-134134851:+|nuORF'] 108780 4147 SYSWTAWR True PC9_epitope_Rep2 1055.4824792012298 1055.48138993586 21.253 2 -2.402903020070452 0.46657817388830947 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant'] 65416 15608 LRFFFFFFFFW True H1975_Epitope_Rep1 1649.8223639382095 1649.82126993586 65.32 2 -2.402992922093537 0.46657817388830947 1.0 ['ENST00000335154.9_1_12:50038759-50038969:-|nuORF'] 44191 22723 IIYLKKPM True PC9_epitope_Rep4 1004.60925993748 1004.60816993586 95.625 2 -2.4031003129588933 0.46657817388830947 1.0 ['ENST00000480294.1_1_6:10891760-10930631:+|nuORF', 'ENSG00000153157|ENST00000283141|SYCP2L'] 122811 16387 VGGRDLVYSL True PC9_epitope_Rep6 1077.5818588893299 1077.5807699358602 75.419 2 -2.4031078045457743 0.46657817388830947 1.0 ['nc|ENSG00000170381|O15041-2|SEMA3E', 'ENSG00000170381|ENST00000643230|SEMA3E'] 80327 16120 PGGGGKAK True H1975_Epitope_Rep3 670.37622322754 670.3756749679301 67.463 1 -2.403198610477214 0.46657817388830947 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2'] 98454 12267 SFGDEHFAE True NCI_RA007_Epitope_Rep5 1037.4090394774498 1037.40847496793 53.834 1 -2.403263547860613 0.46657817388830947 1.0 ['nc|ENSG00000166133|Q8IZ73-2|RPUSD2', 'ENSG00000166133|ENST00000315616|RPUSD2'] 69814 18548 LVGKVIGK True PC9_epitope_Rep1 812.5483739330799 812.54726993586 76.135 2 -2.4033519810686794 0.46657817388830947 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'nc|ENSG00000114416|P51114-2|FXR1', 'nc|ENSG00000114416|P51114-3|FXR1', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1', 'ENSG00000129245|ENST00000250113|FXR2'] 84518 20651 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 86.389 2 -2.4037259541787286 0.4665943280940542 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 86979 17170 QLWWRNWFWVH True PC9_epitope_Rep5 1656.8102361147198 1656.80912993586 71.065 2 -2.4039370566427922 0.46659994732683696 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 56242 21455 LCPLHVVP True PC9_epitope_Rep4 876.4891448047999 876.48859496793 90.717 1 -2.4049538619635915 0.4666161009628553 1.0 ['ENST00000393640.8_1_16:70432511-70432613:-|nuORF'] 49130 18550 KEKLRLNQSPP True H1975_Epitope_Rep2 1308.75138382592 1308.75028993586 76.977 2 -2.4053934807469295 0.4666322542585355 1.0 ['ENST00000452439.1_1_19:50016657-50027781:+|nuORF'] 45466 20094 IQLKRNKTEKV True NCI_RA007_Epitope_Rep5 1355.82488311935 1355.82378993586 84.234 2 -2.4054774325496884 0.4666329572627964 1.0 ['nc|ENSG00000088756|Q9P2N2-3|ARHGAP28', 'nc|ENSG00000088756|Q9P2N2-5|ARHGAP28', 'nc|ENSG00000088756|Q9P2N2-2|ARHGAP28', 'ENSG00000088756|ENST00000383472|ARHGAP28'] 126786 25131 VLPLNLAK True NCI_RA007_Epitope_Rep1 866.55893861678 866.5583949679301 104.0 1 -2.4055679401200987 0.4666329572627964 1.0 ['ENSG00000126603|ENST00000433375|GLIS2'] 126678 23661 VLPASHRR True H1975_Epitope_Rep3 934.5460825173 934.54498993586 98.694 2 -2.4059757591055506 0.46663857579268936 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 80546 7965 PGPLSKQGS True PC9_epitope_Rep2 869.46068112749 869.45958993586 36.002 2 -2.4061298093418633 0.46663927864155397 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 52909 23363 KPGFIKVVR True PC9_epitope_Rep6 1042.66513502082 1042.66402993586 102.97 2 -2.4062311443658246 0.46663927864155397 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 61748 22147 LLAFAKNL True NCI_RA007_Epitope_Rep4 888.54328855264 888.54218993586 96.051 2 -2.4067687852656827 0.4666772001896034 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 3880 7291 AGYVEGGK True PC9_epitope_Rep2 779.3813681776298 779.38026993586 33.431 2 -2.4067867463450274 0.4666772001896034 1.0 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 228 16672 AAFSGHNA True NCI_RA007_Epitope_Rep5 773.34565137525 773.3451049679301 70.896 1 -2.406840190181757 0.4666772001896034 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 99273 19341 SHQNMTES True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 81.275 2 -2.4072285548425674 0.46670388472233926 1.0 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000493238.1_1_3:149677832-149678888:+|nuORF', 'nc|ENSG00000082996|O43567-2|RNF13'] 37730 25355 GWFVFRQQNC True H1975_Epitope_Rep3 1283.5869613531097 1283.58637496793 105.46 1 -2.407593521728645 0.46672073647289314 1.0 ['ENST00000529807.5_1_11:77652239-77667028:-|nuORF'] 19544 18630 ELPTALKGR True PC9_epitope_Rep1 983.5763795860698 983.57528993586 76.448 2 -2.4077114833647966 0.46672073647289314 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 115028 14031 TRCGDGGK True NCI_RA007_Epitope_Rep5 792.3548361599599 792.35372993586 60.661 2 -2.4080142825931947 0.46672073647289314 1.0 ['TENM4|p.I2464Kfs*8|1|0.06|ENSG00000149256|chr11:78668953-78668954|GA/-|frameshift_variant', 'ENSG00000149256|ENST00000278550|TENM4'] 40146 6399 HQDFWGAPV True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 29.638 2 -2.40850975850219 0.46675373645239776 1.0 ['ENST00000392842.5_1_12:106976790-107075774:+|nuORF'] 17011 23168 EGDEDPCP True H1975_Epitope_Rep1 860.28581311028 860.28470993586 96.317 2 -2.409002626730177 0.46675373645239776 1.0 ['ENSG00000188818|ENST00000283441|ZDHHC11'] 123365 23118 VGMFLKNP True PC9_epitope_Rep2 904.4840594243599 904.4835149679301 94.414 1 -2.409184047017711 0.46675373645239776 1.0 ['VWA3B|p.D245Mfs*34|1|0.16|ENSG00000168658|chr2:98128265-98128265|G/-|frameshift_variant'] 82575 7208 PPVPMTQLSK True NCI_RA007_Epitope_Rep1 1096.5950664253198 1096.59396993586 32.027 2 -2.409205553421982 0.46675373645239776 1.0 ['ENST00000556961.1_1_14:92336310-92336571:-|nuORF'] 65316 386 LRDEDIKLWC True H1975_Epitope_Rep2 1289.6438075228898 1289.64217490379 2.1017 3 -2.4096650791414134 0.4667698854061341 1.0 ['ERCC6L|p.G476Dfs*14|1|0.06|ENSG00000186871|chrX:72207340-72207340|C/-|frameshift_variant'] 129768 25231 VRRGHVAP True PC9_epitope_Rep2 890.5198677694599 890.5193149679301 102.72 1 -2.4100038991060617 0.4667860340196956 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6', 'nc|ENSG00000173826|Q9H252-2|KCNH6', 'ENSG00000173826|ENST00000314672|KCNH6', 'nc|ENSG00000173826|Q9H252-3|KCNH6', 'nc|ENSG00000055118|Q12809-4|KCNH2', 'KCNH7|p.Y326Ffs*6|1|0.43|ENSG00000184611|chr2:162504576-162504594|ATCTTGTTAATGGTGCTGT/-|frameshift_variant', 'nc|ENSG00000184611|Q9NS40-2|KCNH7', 'KCNH7|p.S932Afs*21|1|0.16|ENSG00000184611|chr2:162384856-162384856|T/-|frameshift_variant', 'KCNH7|p.E1030Kfs*6|1|0.13|ENSG00000184611|chr2:162379896-162379896|C/-|frameshift_variant', 'ENSG00000184611|ENST00000332142|KCNH7'] 99054 22726 SHGAPLLKQL True NCI_RA007_Epitope_Rep5 1062.61857875122 1062.61748993586 94.611 2 -2.4102899168286225 0.4668021822930929 1.0 ['NBEA|p.P2803Lfs*12|1|0.28|ENSG00000172915|chr13:35667378-35667378|C/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 15732 16169 ECDDCDSC True PC9_epitope_Rep2 888.1935696015601 888.19246993586 67.447 2 -2.411195707142923 0.46680849719323003 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 100380 21493 SKTSGKAK True PC9_epitope_Rep2 805.4657665079299 805.46466993586 88.143 2 -2.411242429177349 0.46680849719323003 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 52908 25481 KPGFIKVVR True PC9_epitope_Rep1 1042.66513502082 1042.66402993586 103.0 2 -2.41127618378634 0.46680849719323003 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 15731 16123 ECDDCDSC True PC9_epitope_Rep2 888.1935696015601 888.19246993586 67.275 2 -2.411485938188549 0.46683165710073193 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 120636 22758 VEIFRLVSKY True PC9_epitope_Rep1 1252.7179584393198 1252.7168699358601 92.347 2 -2.4117852560185056 0.46683165710073193 1.0 ['ENSG00000147113|ENST00000398000|DIPK2B', 'nc|ENSG00000147113|Q9H7Y0-2|DIPK2B'] 124052 13059 VGSKAGSN True NCI_RA007_Epitope_Rep3 718.3609670862201 718.3604149679301 58.646 1 -2.4118075120665003 0.46683165710073193 1.0 ['ENSG00000182963|ENST00000592524|GJC1'] 85604 11940 QGIGIPLV True PC9_epitope_Rep5 795.48543932335 795.48434993586 50.924 2 -2.4119822669967155 0.46683165710073193 1.0 ['ENSG00000151617|ENST00000651419|EDNRA', 'EDNRA|p.I204F|1|0.27|ENSG00000151617|chr4:147532567-147532567|A/T|missense_variant'] 64363 25177 LPLLLLWTRG True PC9_epitope_Rep2 1180.73321458064 1180.73210993586 102.51 2 -2.4120643693981356 0.46683165710073193 1.0 ['nc|ENSG00000074660|Q14162-3|SCARF1', 'ENST00000573867.1_1_17:1546734-1549000:-|nuORF', 'nc|ENSG00000074660|Q14162-4|SCARF1', 'ENST00000576012.5_1_17:1543740-1549000:-|nuORF', 'nc|ENSG00000074660|Q14162-5|SCARF1', 'nc|ENSG00000074660|Q14162-2|SCARF1', 'ENSG00000074660|ENST00000263071|SCARF1'] 142790 15855 YYRQGCAS True NCI_RA007_Epitope_Rep5 946.3967009719398 946.39560993586 67.706 2 -2.4122646414407676 0.46683165710073193 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 30563 7207 GAHFPQVP True H1975_Epitope_Rep3 851.42898707639 851.42843496793 32.698 1 -2.4129350337240543 0.4668639489453121 1.0 ['ENSG00000155252|ENST00000370631|PI4K2A'] 123520 10623 VGPLELEI True NCI_RA007_Epitope_Rep5 868.4905842734399 868.49003496793 47.5 1 -2.4130119513108457 0.4668639489453121 1.0 ['ENSG00000141519|ENST00000397545|CCDC40', 'CCDC40|p.M808Ffs*10|1|0.08|ENSG00000141519|chr17:80086187-80086188|-/CTTCC|frameshift_variant', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'ENST00000572253.5_1_17:78055494-78060128:+|nuORF'] 68479 13824 LTFMRFAY True NCI_RA007_Epitope_Rep5 1047.52117320907 1047.5200699358602 59.849 2 -2.413218720656973 0.4668751777082741 1.0 ['ENSG00000060762|ENST00000360961|MPC1'] 83219 17607 PSVPAPGH True NCI_RA007_Epitope_Rep3 760.3867879112399 760.38568993586 77.213 2 -2.4136900679891315 0.4668751777082741 1.0 ['ENST00000580011.1_1_17:62082347-62097946:-|nuORF'] 83999 6057 PVSSHTPPGT True PC9_epitope_Rep2 978.4770594676199 978.47596993586 28.692 2 -2.4140725513406687 0.46689132266217354 1.0 ['nc|ENSG00000214900|Q8WXQ3|LINC01599'] 142789 16313 YYRQGCAS True NCI_RA007_Epitope_Rep4 946.3967009719398 946.39560993586 70.746 2 -2.414861247823833 0.46691377785266 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 80533 25024 PGPKRERLI True NCI_RA007_Epitope_Rep5 1064.6454622054 1064.6443699358601 103.76 2 -2.415203077083015 0.46691377785266 1.0 ['ENSG00000101407|ENST00000373447|TTI1'] 81135 23756 PKGHGGAR True PC9_epitope_Rep2 778.41981937502 778.41872993586 96.85 2 -2.4152149440683153 0.46691377785266 1.0 ['ENST00000427323.5_1_3:38388271-38390057:+|nuORF'] 99083 16803 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 71.384 2 -2.4153563910822493 0.46691377785266 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 139212 11681 YLFEFHEDIEV True NCI_RA007_Epitope_Rep2 1439.66089705567 1439.65980993586 50.03 2 -2.415812390286398 0.46691447465408675 1.0 ['CDH10|p.V393F|1|0.37|ENSG00000040731|chr5:24509645-24509645|C/A|missense_variant'] 66706 27125 LSLENVLYY True PC9_epitope_Rep5 1112.57537652656 1112.57426993586 111.05 2 -2.415837908733525 0.46691447465408675 1.0 ['SORL1|p.G950Afs*58|1|0.23|ENSG00000137642|chr11:121558775-121558775|G/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF'] 139000 18882 YKTFLIWVLI True NCI_RA007_Epitope_Rep3 1294.76893138302 1294.7678299358602 82.559 2 -2.4167576609015007 0.4669622079248581 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 45640 20691 IRDNYFSLP True H1975_Epitope_Rep3 1123.56620882519 1123.5651099358602 86.453 2 -2.41731841172738 0.46696290368436016 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ENST00000261834.9_1_14:96756535-96777546:-|nuORF'] 92414 19965 RLQQLEEKV True NCI_RA007_Epitope_Rep4 1141.64552177505 1141.6444299358602 86.333 2 -2.4174027887975336 0.46696290368436016 1.0 ['ENSG00000226321|ENST00000690015|CROCC2'] 124895 17459 VHPFHLLV True NCI_RA007_Epitope_Rep3 960.5545219426799 960.55342993586 76.602 2 -2.4175389809150363 0.4669741289446252 1.0 ['CON__Q3SZH5'] 93649 23067 RQRGSLAI True PC9_epitope_Rep3 899.5300980999898 899.52900993586 93.995 2 -2.4176139848986153 0.4669741289446252 1.0 ['nc|ENSG00000197162|A8K8V0-2|ZNF785', 'ENSG00000197162|ENST00000395216|ZNF785'] 92431 19531 RLRLQEPLR True H1975_Epitope_Rep2 1179.72002412799 1179.7189299358602 81.045 2 -2.417999870557128 0.4670323884934507 1.0 ['ENST00000345117.2_1_8:42693107-42698298:-|nuORF'] 14869 7450 DWENTDWF True H1975_Epitope_Rep2 1111.42468954159 1111.42417496793 33.601 1 -2.418273489782335 0.46704852958209175 1.0 ['PEAK1-TSPAN3|1|fusion', 'PEAK1-TSPAN3|2|fusion', 'TSPAN3|p.E164Q|1|0.2|ENSG00000140391|chr15:77052872-77052872|C/G|missense_variant', 'nc|ENSG00000140391|O60637-3|TSPAN3', 'nc|ENSG00000140391|O60637-2|TSPAN3', 'ENSG00000140391|ENST00000267970|TSPAN3'] 72433 22137 MKPAIAPK True PC9_epitope_Rep2 854.5047948689399 854.50368993586 90.628 2 -2.419469768819957 0.4670680744007832 1.0 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 125744 20222 VKSKEEELKAL True NCI_RA007_Epitope_Rep2 1272.72891704584 1272.7278299358602 83.69 2 -2.419536296000417 0.4670680744007832 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 79515 22105 PCKLVIPN True PC9_epitope_Rep4 882.4997094885 882.49860993586 93.243 2 -2.4195738455801945 0.4670680744007832 1.0 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 43130 15823 IFALAVRK True H1975_Epitope_Rep2 916.5858220709599 916.58472993586 66.052 2 -2.420258502241305 0.4670680744007832 1.0 ['ENSG00000119403|ENST00000373896|PHF19'] 84347 24800 PYVPTISH True PC9_epitope_Rep3 912.4705175352001 912.46942993586 100.77 2 -2.420446790551071 0.4670680744007832 1.0 ['ENSG00000150457|ENST00000382592|LATS2'] 63500 5945 LLYCAIKQQM True NCI_RA007_Epitope_Rep4 1209.62498665461 1209.62388993586 29.487 2 -2.420501426888488 0.4670680744007832 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'ENST00000491066.1_1_X:153697015-153697611:+|nuORF'] 24737 27078 FAQFKSFL True PC9_epitope_Rep3 986.5225531080599 986.52144993586 111.4 2 -2.4205592107095337 0.4670680744007832 1.0 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B'] 49137 23346 KEKVIIWKI True PC9_epitope_Rep5 1155.73796560791 1155.73633490379 94.782 3 -2.4206498336130755 0.4670680744007832 1.0 ['NUP133|p.L123V|1|0.48|ENSG00000069248|chr1:229502037-229502037|G/C|missense_variant'] 936 5262 ADPHNATLI True PC9_epitope_Rep4 950.48214484806 950.48159496793 26.94 1 -2.4210991518109117 0.4670680744007832 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'LYST|p.G2193Efs*38|1|0.28|ENSG00000143669|chr1:235759275-235759275|C/-|frameshift_variant', 'ENST00000492844.1_1_1:235950498-235952065:-|nuORF', 'LYST|p.K1977Lfs*24|1|0.09|ENSG00000143669|chr1:235766272-235766273|-/CACATAGGTAGGTATAATCATTTTTGTTAGA|frameshift_variant', 'nc|ENSG00000143669|Q99698-2|LYST', 'ENST00000489585.5_1_1:235926109-235996891:-|nuORF'] 12522 25244 DKKEILKK True NCI_RA007_Epitope_Rep3 1000.6280808057599 1000.62698993586 109.1 2 -2.421127165260245 0.4670680744007832 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 28600 7730 FSGTDLPAA True H1975_Epitope_Rep3 877.41814760917 877.41704993586 34.716 2 -2.4214950824097268 0.4670680744007832 1.0 ['nc|ENSG00000183117|Q96PZ7-3|CSMD1', 'CSMD1|p.N2395Ifs*41|1|0.28|ENSG00000183117|chr8:3091622-3091622|C/-|frameshift_variant', 'CSMD1|p.L2439*|1|0.09|ENSG00000183117|chr8:3087259-3087259|G/-|frameshift_variant', 'nc|ENSG00000183117|Q96PZ7-2|CSMD1', 'ENSG00000183117|ENST00000635120|CSMD1', 'ENST00000523387.5_1_8:2986336-3141840:-|nuORF'] 45844 8385 ISDNAYQF True H1975_Epitope_Rep1 956.4239612656 956.42286993586 37.181 2 -2.421521602613867 0.4670680744007832 1.0 ['MYH13|p.S1560Rfs*8|1|0.62|ENSG00000006788|chr17:10309807-10309807|G/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'MYH13|p.E1060Gfs*16|1|0.18|ENSG00000006788|chr17:10320428-10320429|TT/-|frameshift_variant', 'MYH13|p.G1061Vfs*16|1|0.18|ENSG00000006788|chr17:10320426-10320427|-/A|frameshift_variant', 'MYH2|p.M166I|1|0.15|ENSG00000125414|chr17:10545353-10545353|C/A|missense_variant', 'nc|ENSG00000125414|Q9UKX2-2|MYH2', 'ENSG00000109061|ENST00000226207|MYH1', 'MYH1|p.T1278Qfs*18|1|0.3|ENSG00000109061|chr17:10500660-10500660|G/-|frameshift_variant', 'MYH1|p.E1318Nfs*2|1|0.26|ENSG00000109061|chr17:10499006-10499006|C/-|frameshift_variant', 'MYH1|p.E865Kfs*20|1|0.33|ENSG00000109061|chr17:10504909-10504909|T/-|frameshift_variant', 'ENSG00000109063|ENST00000583535|MYH3', 'MYH3|p.L993*|1|0.11|ENSG00000109063|chr17:10639422-10639422|A/-|frameshift_variant', 'MYH3|p.C793Afs*31|1|0.13|ENSG00000109063|chr17:10640382-10640382|A/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'MYH8|p.A1159Qfs*8|1|0.3|ENSG00000133020|chr17:10400650-10400650|C/-|frameshift_variant', 'ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.D1019Tfs*6|1|0.18|ENSG00000264424|chr17:10453208-10453208|C/-|frameshift_variant', 'MYH4|p.N665Tfs*2|1|0.48|ENSG00000264424|chr17:10455878-10455878|G/-|frameshift_variant'] 81214 21662 PKGSVPPA True PC9_epitope_Rep6 751.42283906679 751.42174993586 96.207 2 -2.4218184450011897 0.4670680744007832 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'PCLO|p.L4314Qfs*3|1|0.17|ENSG00000186472|chr7:82915045-82915045|A/-|frameshift_variant', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.K4160Nfs*36|1|0.17|ENSG00000186472|chr7:82915506-82915506|T/-|frameshift_variant', 'PCLO|p.A4175Qfs*21|1|0.16|ENSG00000186472|chr7:82915464-82915464|T/-|frameshift_variant', 'PCLO|p.T3186Qfs*17|1|0.19|ENSG00000186472|chr7:82951032-82951032|T/-|frameshift_variant', 'PCLO|p.R3246Efs*18|1|0.25|ENSG00000186472|chr7:82950852-82950852|G/-|frameshift_variant', 'PCLO|p.E3238Nfs*26|1|0.12|ENSG00000186472|chr7:82950876-82950876|C/-|frameshift_variant', 'PCLO|p.G2368Vfs*76|1|0.16|ENSG00000186472|chr7:82953850-82953850|C/-|frameshift_variant'] 35299 25366 GRKAGPPP True PC9_epitope_Rep2 778.4449714936999 778.44386993586 103.25 2 -2.422184384774542 0.4670680744007832 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 39615 24874 HLLNAKAT True NCI_RA007_Epitope_Rep5 866.49740098938 866.49630993586 103.17 2 -2.4225996151346765 0.4670680744007832 1.0 ['ENST00000543938.5_1_15:83328314-83349061:-|nuORF', 'nc|ENSG00000103723|Q13367-3|AP3B2', 'nc|ENSG00000103723|Q13367|AP3B2', 'ENSG00000103723|ENST00000535359|AP3B2'] 133569 8436 VWVDWEWRFDH True H1975_Epitope_Rep1 1573.7102472899296 1573.70914993586 37.375 2 -2.4229365529437468 0.4670680744007832 1.0 ['ENST00000602772.5_1_X:73289164-73289383:+|nuORF'] 52906 24890 KPGFIKVVR True NCI_RA007_Epitope_Rep1 1042.66513502082 1042.66402993586 103.02 2 -2.4230012464782877 0.4670680744007832 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 113031 9493 TLNEIYHWFT True NCI_RA007_Epitope_Rep2 1322.62953735774 1322.62844993586 41.538 2 -2.423508979932962 0.4670680744007832 1.0 ['nc|ENSG00000290184|Q9BZS1-2|FOXP3', 'nc|ENSG00000290184|Q9BZS1-4|FOXP3', 'ENSG00000049768|ENST00000376207|FOXP3', 'nc|ENSG00000290184|Q9BZS1-3|FOXP3'] 47626 14025 IVYPNTFLNFS True NCI_RA007_Epitope_Rep1 1313.6655885132898 1313.66448993586 58.582 2 -2.4240015721699137 0.4670680744007832 1.0 ['SLITRK4|p.L74V|1|0.15|ENSG00000179542|chrX:143630889-143630889|G/C|missense_variant'] 38705 23815 HGDTALHA True PC9_epitope_Rep4 820.3827651599601 820.38166993586 100.02 2 -2.424027185518992 0.4670680744007832 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 138188 1270 YGPTEEAA True PC9_epitope_Rep2 836.3552129994399 836.35410993586 7.1408 2 -2.424216376563205 0.4670680744007832 1.0 ['nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 34133 16502 GNAKELRVP True NCI_RA007_Epitope_Rep3 982.5559784946598 982.55488993586 72.709 2 -2.4243193128795597 0.4670680744007832 1.0 ['ENST00000301459.4_1_11:63678704-63678836:-|nuORF'] 52898 22325 KPGERKKT True PC9_epitope_Rep3 942.5610638750999 942.5605149679301 91.159 1 -2.424413503770888 0.4670680744007832 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 73106 24583 MRIILGFLLFL True PC9_epitope_Rep4 1334.8148360296198 1334.81372993586 103.05 2 -2.424446161591987 0.4670680744007832 1.0 ['ENSG00000130943|ENST00000253255|PKDREJ'] 3445 17316 AGKSSSKKKK True NCI_RA007_Epitope_Rep3 1047.64004247179 1047.63947496793 75.993 1 -2.424543878876084 0.4670680744007832 1.0 ['ENST00000440030.1_1_6:28751412-28751496:-|nuORF'] 81463 25407 PLFWLFLKILQ True PC9_epitope_Rep1 1416.8533297133197 1416.8522299358601 102.7 2 -2.4247472024602543 0.4670680744007832 1.0 ['CPA6|p.C18F|1|0.15|ENSG00000165078|chr8:67746077-67746077|C/A|missense_variant'] 121235 11362 VETDQRKM-[Oxidation] True H1975_Epitope_Rep1 1021.4862446327699 1021.4856749679301 48.681 1 -2.4251141419219215 0.4670736842105263 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 99081 15120 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 64.825 2 -2.425712508124804 0.4670849034757163 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 31221 3336 GCQHLLAH True PC9_epitope_Rep4 877.42285615013 877.42174993586 18.834 2 -2.425756548762866 0.4670849034757163 1.0 ['ENST00000266643.5_1_12:58150815-58152358:+|nuORF'] 80615 25060 PGRLYEVKLV True H1975_Epitope_Rep2 1172.69174369148 1172.6906499358602 102.97 2 -2.4260836887313593 0.4670905129311706 1.0 ['ENSG00000103742|ENST00000352385|IGDCC4', 'ENST00000559327.1_1_15:65676349-65688574:-|nuORF', 'nc|ENSG00000103742|Q8TDY8-2|IGDCC4'] 12524 8169 DKKGCHCVI True PC9_epitope_Rep2 1001.4786567740899 1001.47754993586 36.777 2 -2.426568838142064 0.4671353843239204 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2', 'nc|ENSG00000133818|P62070-2|RRAS2'] 125640 25450 VKKTKTDLKH True PC9_epitope_Rep1 1196.7241064489199 1196.72300993586 102.88 2 -2.4269947902801463 0.4671353843239204 1.0 ['PHF12|p.Q258Kfs*12|1|0.0|ENSG00000109118|chr17:28921752-28921753|-/GCCATGACACATGCTTAAGATCTGTTTT|frameshift_variant'] 15247 14181 EAEPHLSG True NCI_RA007_Epitope_Rep1 838.38209645362 838.38154496793 59.195 1 -2.4270243237321916 0.4671353843239204 1.0 ['ENSG00000198597|ENST00000355537|ZNF536', 'ZNF536|p.R294Lfs*79|1|0.29|ENSG00000198597|chr19:30444442-30444443|-/T|frameshift_variant', 'ZNF536|p.G624Wfs*47|1|0.21|ENSG00000198597|chr19:30445430-30445431|-/T|frameshift_variant'] 115911 25147 TSFPKTGK True PC9_epitope_Rep1 864.4705175351999 864.46942993586 101.61 2 -2.4270469315659096 0.4671353843239204 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 53022 24492 KPKLLPLLMLW True PC9_epitope_Rep4 1350.8461361578998 1350.84502993586 102.69 2 -2.4270567113189845 0.4671353843239204 1.0 ['ENST00000473989.7_2_7:138968337-138968418:+|nuORF'] 6164 10895 APNKGGGG True NCI_RA007_Epitope_Rep4 656.3241876546799 656.32363496793 48.763 1 -2.4271203878873595 0.4671353843239204 1.0 ['ENSG00000116017|ENST00000263620|ARID3A'] 82635 23445 PQKTDHPS True H1975_Epitope_Rep3 908.4351946556399 908.43408993586 97.851 2 -2.4273612153180903 0.4671353843239204 1.0 ['ENSG00000184371|ENST00000329608|CSF1'] 74352 8682 NEQKLSIYQ True PC9_epitope_Rep4 1121.57168812845 1121.5705899358602 40.887 2 -2.42737071221134 0.4671353843239204 1.0 ['ENST00000396623.7_1_8:67380853-67381021:+|nuORF'] 10341 22076 CFPHSTMF True H1975_Epitope_Rep3 968.38844478736 968.38734993586 92.317 2 -2.428100884910471 0.467151517703027 1.0 ['ENST00000557778.1_1_14:102100909-102101767:-|nuORF'] 72250 22113 MHIVADLY True NCI_RA007_Epitope_Rep5 960.47388866348 960.47278993586 92.189 2 -2.428207196121712 0.4671571258669866 1.0 ['ENSG00000073910|ENST00000542859|FRY', 'FRY|p.G2656Efs*66|1|0.1|ENSG00000073910|chr13:32267187-32267187|G/-|frameshift_variant'] 93017 18521 RPKVCVDL True PC9_epitope_Rep6 928.5164221817998 928.51532993586 83.882 2 -2.428729524873124 0.46715781718675997 1.0 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1'] 52907 23765 KPGFIKVVR True NCI_RA007_Epitope_Rep3 1042.66513502082 1042.66402993586 103.01 2 -2.4290156454074747 0.46715781718675997 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 63140 22289 LLRLAKEY True H1975_Epitope_Rep2 1004.60186605792 1004.60076993586 92.112 2 -2.429853659462132 0.4671774040788837 1.0 ['CON__P02769'] 82641 26309 PQLEVVLFV True PC9_epitope_Rep1 1042.60628273202 1042.6051899358602 106.65 2 -2.43063933108323 0.4671774040788837 1.0 ['nc|ENSG00000204700|O76002|OR2J2', 'ENSG00000204700|ENST00000641417|OR2J2'] 38703 21815 HGDTALHA True NCI_RA007_Epitope_Rep3 820.3827651599601 820.38166993586 94.775 2 -2.430734328561936 0.4671774040788837 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 126433 22952 VLKNFAFA True NCI_RA007_Epitope_Rep5 908.5119884243599 908.51088993586 95.51 2 -2.4310500389707355 0.4671774040788837 1.0 ['ENST00000468917.1_1_22:20103119-20104069:-|nuORF', 'ENST00000494641.1_1_22:20103119-20103621:-|nuORF'] 86863 21519 QLQRTSKK True PC9_epitope_Rep6 987.58252759567 987.58142993586 95.645 2 -2.4311822877170517 0.4671774040788837 1.0 ['nc|ENSG00000204764|Q9H2T7-2|RANBP17'] 91394 21972 RHHKEKIK True PC9_epitope_Rep6 1074.6410455313 1074.6399499358602 97.434 2 -2.43160294281591 0.4671774040788837 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1'] 116360 6057 TTFAQRKGA True PC9_epitope_Rep2 978.5246783663798 978.52358993586 28.692 2 -2.4316206213008362 0.4671774040788837 1.0 ['ENSG00000203867|ENST00000369519|RBM20'] 130603 8862 VSSKTAVL True NCI_RA007_Epitope_Rep4 803.4752685624699 803.47416993586 40.909 2 -2.432097434091151 0.4671774040788837 1.0 ['ENST00000463003.1_1_13:115086670-115089303:+|nuORF'] 114167 21868 TPKQASAT True PC9_epitope_Rep5 802.4184819623399 802.41738993586 89.153 2 -2.432243781997459 0.4671774040788837 1.0 ['BSN|p.G2876Dfs*18|1|0.14|ENSG00000164061|chr3:49658178-49658178|G/-|frameshift_variant', 'BSN|p.G3480Afs*7|1|0.72|ENSG00000164061|chr3:49662282-49662282|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 39794 17039 HMHGLAFL True NCI_RA007_Epitope_Rep3 924.4639926861199 924.46288993586 74.887 2 -2.432268792045268 0.4671774040788837 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 62346 9909 LLGKKMNK True NCI_RA007_Epitope_Rep2 930.5684577546599 930.5679049679301 43.17 1 -2.432346226096534 0.4671774040788837 1.0 ['HERVE_a-int_dup96|chrX:56024954-56031717:-|1.5022001292963447|0.1365172086110313|3.46|538.0|51|1|sense'] 136068 15588 WRGTLGRR True NCI_RA007_Epitope_Rep5 1000.5678805910399 1000.56678993586 66.666 2 -2.432970636834331 0.4672040577941006 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 34199 17376 GNINAVHLK True NCI_RA007_Epitope_Rep5 964.54541381096 964.54430993586 73.617 2 -2.4344359363960297 0.46725175737677316 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 19867 8359 ELTFLYERH True PC9_epitope_Rep4 1206.6033226098998 1206.6022299358601 39.61 2 -2.4345924491928055 0.4672573635416557 1.0 ['ENSG00000155980|ENST00000455537|KIF5A'] 103913 18703 SQALEKLGRL True NCI_RA007_Epitope_Rep1 1113.65060715549 1113.6495099358601 76.891 2 -2.4351109508252295 0.4672580526354558 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF', 'ENST00000486253.1_1_15:91479504-91483847:+|nuORF', 'ENST00000553671.6_1_15:91478554-91486156:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 126758 25787 VLPGKKKKKT True PC9_epitope_Rep2 1125.75976368165 1125.75811490379 104.92 3 -2.43511295833026 0.4672580526354558 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 142786 15229 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 67.427 2 -2.435276162489256 0.4672636585571176 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 15738 13152 ECEHAYPG True NCI_RA007_Epitope_Rep5 904.3385173894799 904.33742993586 57.266 2 -2.436104019621896 0.4673064376959825 1.0 ['KLK6|p.Q175H|1|0.16|ENSG00000167755|chr19:50961801-50961801|C/G|missense_variant', 'nc|ENSG00000167755|Q92876-2|KLK6', 'ENSG00000167755|ENST00000310157|KLK6'] 5054 11412 ALLAPRVGGT True PC9_epitope_Rep5 953.56581490237 953.56470993586 48.896 2 -2.4361875065152456 0.4673064376959825 1.0 ['ENSG00000204970|ENST00000504120|PCDHA1', 'PCDHA1|p.C759Lfs*3|1|0.36|ENSG00000204970|chr5:140788564-140788565|-/T|frameshift_variant', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'nc|ENSG00000204963|Q9UN72-2|PCDHA7'] 2794 7845 AEVAQQEF True H1975_Epitope_Rep2 920.4239612655999 920.4234149679301 35.125 1 -2.4365504487050407 0.4673134187017961 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 32997 13618 GIGGFCHH True H1975_Epitope_Rep3 826.3544422371401 826.35389496793 57.669 1 -2.4375461453628584 0.4673134187017961 1.0 ['ENST00000515834.1_1_5:180657548-180660003:+|nuORF'] 4669 16828 ALAPDPYY True NCI_RA007_Epitope_Rep1 908.4279840168801 908.42688993586 69.587 2 -2.4377952018171114 0.4673134187017961 1.0 ['ENST00000221859.8_1_19:36605990-36606173:-|nuORF'] 61701 25395 LKWQVRVV True PC9_epitope_Rep2 1026.6338348925397 1026.63327496793 103.36 1 -2.4378955240837623 0.4673134187017961 1.0 ['ENST00000603538.1_1_8:64080466-64080652:-|nuORF'] 125644 16735 VKKTTEAT True NCI_RA007_Epitope_Rep5 876.4916469026 876.49054993586 71.134 2 -2.438104499331421 0.4673134187017961 1.0 ['ENST00000537556.1_1_12:64238596-64474299:+|nuORF', 'nc|ENSG00000196935|Q7Z6B7-2|SRGAP1', 'ENSG00000196935|ENST00000355086|SRGAP1'] 110918 10913 TGVVPQLVK True PC9_epitope_Rep4 939.5753169569099 939.57420993586 49.746 2 -2.4383882466046924 0.4673477332267194 1.0 ['ENSG00000182481|ENST00000330459|KPNA2'] 36972 11194 GVMRIFGG True NCI_RA007_Epitope_Rep5 835.4374435851098 835.43634993586 49.693 2 -2.4385243374023893 0.4673477332267194 1.0 ['CACNA2D2|p.I159Mfs*29|1|0.16|ENSG00000007402|chr3:50387601-50387601|G/-|frameshift_variant', 'CACNA2D2|p.F960Lfs*10|1|0.11|ENSG00000007402|chr3:50366014-50366015|-/C|frameshift_variant', 'nc|ENSG00000007402|Q9NY47-4|CACNA2D2', 'ENSG00000007402|ENST00000424201|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-3|CACNA2D2', 'nc|ENSG00000007402|Q9NY47|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-5|CACNA2D2', 'chr3:50364976-50365075|435|26.02|0.52|5.63|-|ENST00000423994|CACNA2D2,CACNA2D2', 'ENST00000487413.1_1_3:50453473-50541058:-|nuORF'] 81137 21825 PKGHGGAR True PC9_epitope_Rep6 778.41981937502 778.41872993586 96.851 2 -2.4386562847217124 0.4673477332267194 1.0 ['ENST00000427323.5_1_3:38388271-38390057:+|nuORF'] 128977 17194 VQKQAITR True NCI_RA007_Epitope_Rep4 942.5610638750999 942.55996993586 74.451 2 -2.4389775120683286 0.4673477332267194 1.0 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.R138Gfs*20|1|0.48|ENSG00000134504|chr18:26459823-26459823|T/-|frameshift_variant'] 3682 14046 AGQVAAANK True NCI_RA007_Epitope_Rep3 828.44536541652 828.44426993586 62.556 2 -2.438982342183612 0.4673477332267194 1.0 ['ENSG00000105372|ENST00000598742|RPS19'] 78019 25062 NVRFLTRQ True PC9_epitope_Rep2 1032.5828619488398 1032.5817699358602 102.07 2 -2.439048974704514 0.4673477332267194 1.0 ['EPHA3|p.P384T|1|0.28|ENSG00000044524|chr3:89341934-89341934|C/A|missense_variant'] 46547 20180 ITAAPPPPV True PC9_epitope_Rep2 861.4960040070499 861.49490993586 83.037 2 -2.4392128898600864 0.4673477332267194 1.0 ['ENST00000336057.9_1_17:42171009-42195058:-|nuORF', 'ENST00000225983.10_1_17:42171009-42195058:-|nuORF'] 138194 23402 YGQEGKFSGP True NCI_RA007_Epitope_Rep5 1068.4876241513198 1068.48652993586 97.308 2 -2.439339495520573 0.4673477332267194 1.0 ['ENSG00000079112|ENST00000027335|CDH17', 'CDH17|p.L680Sfs*64|1|0.23|ENSG00000079112|chr8:94146057-94146057|G/-|frameshift_variant', 'CDH17|p.L31Q|1|0.23|ENSG00000079112|chr8:94189245-94189245|A/T|missense_variant'] 85898 18294 QHFKVYYP True PC9_epitope_Rep3 1080.5392658013598 1080.5381699358602 75.573 2 -2.440516888921943 0.467396793334175 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'TRRAP|p.F3828Sfs*8|1|0.26|ENSG00000196367|chr7:99012257-99012257|T/-|frameshift_variant', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.M3432Ifs*10|1|0.06|ENSG00000196367|chr7:99004218-99004218|G/-|frameshift_variant'] 119759 19273 VAYKFRLV True PC9_epitope_Rep1 994.5963867546599 994.59528993586 78.937 2 -2.440705843441888 0.467396793334175 1.0 ['ENSG00000184984|ENST00000383263|CHRM5'] 48459 9120 KAAQVTAG True PC9_epitope_Rep2 744.4130026590799 744.4124549679301 40.419 1 -2.4408468955418003 0.467396793334175 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 94756 25461 RSKRKGSA True PC9_epitope_Rep5 888.5253470727198 888.52424993586 103.17 2 -2.440936518166083 0.467396793334175 1.0 ['nc|ENSG00000165304|Q14680-3|MELK', 'nc|ENSG00000165304|Q14680-4|MELK', 'nc|ENSG00000165304|Q14680-5|MELK', 'nc|ENSG00000165304|Q14680-2|MELK', 'nc|ENSG00000165304|Q14680-8|MELK', 'nc|ENSG00000165304|Q14680-7|MELK', 'nc|ENSG00000165304|Q14680-6|MELK', 'ENSG00000165304|ENST00000298048|MELK'] 64684 11132 LPVPQGHG True NCI_RA007_Epitope_Rep5 803.4289870763901 803.42843496793 49.455 1 -2.441176404008902 0.467396793334175 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 110764 5904 TGHPPGPT True PC9_epitope_Rep3 762.36605246666 762.36494993586 27.771 2 -2.441574178896553 0.46740239655770993 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 87653 14783 QQRRRRRRDPE True H1975_Epitope_Rep3 1551.8566857965095 1551.85558993586 62.242 2 -2.4433865845829863 0.4674233180460302 1.0 ['ENSG00000113593|ENST00000261308|PPWD1', 'ENST00000508982.1_1_5:64859104-64863443:+|nuORF'] 135534 20020 WKLMPVPL True PC9_epitope_Rep6 982.5673951254998 982.56628993586 89.674 2 -2.4434753806463916 0.4674233180460302 1.0 ['ENST00000459909.1_1_21:34841018-34841192:-|nuORF'] 132971 14522 VVPGKYVVT True NCI_RA007_Epitope_Rep2 960.56441792004 960.56332993586 61.151 2 -2.444078021703249 0.4674233180460302 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 73102 3493 MRGCLAHM True PC9_epitope_Rep5 917.4033836588499 917.40228993586 18.51 2 -2.4441181085607826 0.4674233180460302 1.0 ['ENSG00000179399|ENST00000377067|GPC5'] 61677 24940 LKTVCAAR True H1975_Epitope_Rep3 860.4902074339599 860.48965496793 103.75 1 -2.444446475095925 0.4674233180460302 1.0 ['ENSG00000126266|ENST00000246553|FFAR1'] 39277 24907 HILKQRKPR True NCI_RA007_Epitope_Rep5 1174.74109392574 1174.7399899358602 103.3 2 -2.4448537777439747 0.4674233180460302 1.0 ['ENSG00000139083|ENST00000396373|ETV6'] 82819 19041 PRRVIERPP True H1975_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.374 2 -2.445252958464746 0.4674233180460302 1.0 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8'] 142389 13737 YYELWWFWLLW True NCI_RA007_Epitope_Rep1 1703.8176724805896 1703.81602490379 57.45 3 -2.445479598952977 0.4674233180460302 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 129835 20990 VRRMPPGAE True PC9_epitope_Rep4 1011.5283838478298 1011.52728993586 88.898 2 -2.4455887054825447 0.4674233180460302 1.0 ['ENST00000564731.5_1_16:46761123-46772038:-|nuORF', 'ENSG00000140795|ENST00000394809|MYLK3', 'nc|ENSG00000140795|Q32MK0-4|MYLK3'] 82292 17950 PPHIFAMA True NCI_RA007_Epitope_Rep4 882.44219461238 882.44108993586 77.662 2 -2.4458788954240074 0.4674233180460302 1.0 ['MYO3A|p.K1368Rfs*19|1|0.31|ENSG00000095777|chr10:26174366-26174366|A/-|frameshift_variant', 'MYO3A|p.N1110Kfs*11|1|0.19|ENSG00000095777|chr10:26170465-26170466|-/A|frameshift_variant', 'ENSG00000095777|ENST00000642920|MYO3A', 'MYO3A|p.G474Wfs*9|1|0.27|ENSG00000095777|chr10:26088259-26088260|-/T|frameshift_variant', 'MYO3A|p.I528Mfs*11|1|0.09|ENSG00000095777|chr10:26096401-26096402|-/G|frameshift_variant'] 116112 14850 TSSEDAPC True NCI_RA007_Epitope_Rep4 808.2908984907199 808.28980993586 64.583 2 -2.4460466806557837 0.4674233180460302 1.0 ['ENST00000546516.5_1_16:705169-713132:+|nuORF', 'WDR90|p.S1458Vfs*13|1|0.09|ENSG00000161996|chr16:665739-665739|A/-|frameshift_variant', 'ENSG00000161996|ENST00000293879|WDR90', 'WDR90|p.R1329Lfs*9|1|0.39|ENSG00000161996|chr16:662009-662019|CGCGTGCCGGC/-|frameshift_variant'] 72098 20466 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 85.667 2 -2.4463911057954992 0.4674233180460302 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 123937 6345 VGRVGKNA True PC9_epitope_Rep1 799.46643521427 799.46532993586 29.217 2 -2.4465491282098895 0.4674233180460302 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 122412 9411 VGDRSEWG True NCI_RA007_Epitope_Rep3 904.4038945273599 904.40278993586 44.104 2 -2.4468323520322164 0.4674233180460302 1.0 ['ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 142788 15404 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 68.147 2 -2.4470319545711066 0.4674233180460302 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 23006 3623 EVFEFYEEIL True PC9_epitope_Rep2 1316.6176352613597 1316.6165299358602 19.211 2 -2.447388051412469 0.4674450404964763 1.0 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.S811Tfs*2|1|0.35|ENSG00000064313|chr8:119762511-119762541|TTATCCAAAGTTCTAACTTCATTATTCACAC/-|frameshift_variant'] 137041 3922 YALVCYGP True PC9_epitope_Rep2 884.4102257777599 884.4096749679301 20.351 1 -2.4474234047795327 0.4674450404964763 1.0 ['ENSG00000078098|ENST00000188790|FAP'] 12521 24902 DKKEILKK True NCI_RA007_Epitope_Rep3 1000.6280808057599 1000.62698993586 107.66 2 -2.44752635648511 0.4674457253450017 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 69481 24343 LVALRHLHF True PC9_epitope_Rep4 1104.65563296628 1104.6545299358602 102.12 2 -2.4476459346676247 0.4674457253450017 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'ENSG00000184304|ENST00000331968|PRKD1'] 53660 23674 KSDKGVRK True H1975_Epitope_Rep2 916.5454138109599 916.54430993586 97.558 2 -2.4478388574157557 0.46744709495561443 1.0 ['ENSG00000231192|ENST00000641874|OR5H1', 'OR5H1|p.H244Qfs*26|1|0.4|ENSG00000231192|chr3:98133427-98133428|-/A|frameshift_variant', 'ENSG00000233412|ENST00000641450|OR5H15'] 92666 19145 RNNISLVK True NCI_RA007_Epitope_Rep5 942.5610638751 942.55996993586 80.512 2 -2.4481262612880657 0.46744709495561443 1.0 ['TMEM2|p.S1179Qfs*81|1|0.27|ENSG00000135048|chr9:71698048-71698048|C/-|frameshift_variant', 'nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 72423 23344 MKLWKKRW True PC9_epitope_Rep6 1174.6797395391397 1174.6786499358602 102.9 2 -2.44820790383029 0.46744709495561443 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5'] 103330 25023 SPMCAMTP True PC9_epitope_Rep3 836.3230676494801 836.32196993586 101.6 2 -2.4482746749785593 0.46744709495561443 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|59|2|sense'] 23703 21299 EYEAQCSR True NCI_RA007_Epitope_Rep5 984.3970948947599 984.39598993586 88.975 2 -2.4504135599638683 0.46753192115946907 1.0 ['ENSG00000186141|ENST00000334163|POLR3C'] 33276 24003 GKKKHRRRPS True PC9_epitope_Rep4 1248.7639546286398 1248.76284993586 100.8 2 -2.4504197946238544 0.46753192115946907 1.0 ['ENSG00000186834|ENST00000332499|HEXIM1'] 142420 10195 YYFCRWYRNRK True NCI_RA007_Epitope_Rep1 1653.7986854548496 1653.79758993586 43.668 2 -2.450810702475456 0.4675480389991481 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 11162 24657 DDLKKAPQL True PC9_epitope_Rep4 1026.5709598524597 1026.5698699358602 103.34 2 -2.452419931162763 0.4675957088767354 1.0 ['ENST00000578618.5_1_18:5398595-5399237:-|nuORF'] 64513 11868 LPRDLLQV True NCI_RA007_Epitope_Rep5 952.5705659296399 952.56946993586 52.307 2 -2.4534958548365546 0.46760267129410527 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3', 'RIMBP3|p.Q1152Sfs*13|1|0.07|ENSG00000275793|chr22:18607981-18607981|G/-|frameshift_variant'] 49569 24688 KFRARSLK True NCI_RA007_Epitope_Rep5 1004.6243328379999 1004.62322993586 102.45 2 -2.453518909430289 0.46760267129410527 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant'] 125618 20925 VKKMLVEA True PC9_epitope_Rep6 916.5415743004799 916.54046993586 93.262 2 -2.4536494062499434 0.46760267129410527 1.0 ['ENSG00000166848|ENST00000300086|TERF2IP'] 72154 12304 MFVLEQEEYQR True NCI_RA007_Epitope_Rep1 1470.68131523042 1470.68077496793 51.831 1 -2.453653593063573 0.46760267129410527 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 82435 20988 PPPLQKKW True H1975_Epitope_Rep1 992.5807366905199 992.57962993586 87.177 2 -2.4537614895567756 0.46760267129410527 1.0 ['ENST00000261401.7_1_12:109041104-109041182:-|nuORF'] 128325 23305 VPPRTTTK True H1975_Epitope_Rep3 898.52361573722 898.52250993586 97.293 2 -2.4542154231343902 0.4676033527190888 1.0 ['nc|ENSG00000170579|O14490-7|DLGAP1', 'ENSG00000170579|ENST00000315677|DLGAP1', 'nc|ENSG00000170579|O14490-3|DLGAP1', 'nc|ENSG00000170579|O14490-2|DLGAP1', 'nc|ENSG00000170579|O14490-4|DLGAP1', 'nc|ENSG00000170579|O14490-6|DLGAP1'] 32691 23828 GGSKGLVR True PC9_epitope_Rep3 772.4555361774 772.45442993586 96.941 2 -2.454339419228788 0.4676033527190888 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'PLCH2|p.G185Rfs*37|1|0.2|ENSG00000149527|chr1:2480218-2480219|-/C|frameshift_variant', 'nc|ENSG00000149527|O75038-5|PLCH2'] 86375 26433 QKDHFKSQ True NCI_RA007_Epitope_Rep5 1016.5039429218 1016.50284993586 109.28 2 -2.455038178971064 0.4676405014302541 1.0 ['ENSG00000255009|ENST00000530464|UBTFL1'] 227 16021 AAFSGHNA True NCI_RA007_Epitope_Rep4 773.34565137525 773.3451049679301 69.495 1 -2.4551680642513842 0.4676418626172549 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 129423 24525 VRGENVVL True H1975_Epitope_Rep3 884.5079656730799 884.50686993586 102.07 2 -2.4557154600164224 0.4676418626172549 1.0 ['ENST00000523511.1_1_8:38021190-38029494:-|nuORF', 'ENSG00000175324|ENST00000311351|LSM1'] 69480 25113 LVALRHLHF True PC9_epitope_Rep2 1104.65563296628 1104.6545299358602 102.26 2 -2.4558053479069364 0.4676418626172549 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'ENSG00000184304|ENST00000331968|PRKD1'] 40867 18556 HSETFYECP True NCI_RA007_Epitope_Rep5 1111.42806066987 1111.4269699358601 78.199 2 -2.455889293590166 0.4676418626172549 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 66750 25936 LSLLHRILLYP True NCI_RA007_Epitope_Rep1 1336.8230922142 1336.82198993586 107.35 2 -2.456118718651881 0.4676425431678129 1.0 ['ENST00000356300.8_1_14:24047750-24047927:-|nuORF'] 82684 23594 PQRIHHMA True NCI_RA007_Epitope_Rep5 988.5025034531601 988.50140993586 98.072 2 -2.4561347107647786 0.4676425431678129 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'nc|ENSG00000155966|P51816-7|AFF2'] 84469 24626 QAIREAREQH True PC9_epitope_Rep3 1236.6323313224 1236.6306749037901 100.09 3 -2.4568523253426844 0.4676445846477392 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'ENST00000368126.2_1_6:131179278-131186801:-|nuORF'] 118969 15010 VAEAIPRI True NCI_RA007_Epitope_Rep5 867.5178020807899 867.51670993586 64.405 2 -2.4573981525815074 0.4676445846477392 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 109860 6113 TEEPVPFKDIM True NCI_RA007_Epitope_Rep5 1304.6322397796798 1304.63114993586 30.193 2 -2.458017949533694 0.4676445846477392 1.0 ['ENSG00000184305|ENST00000509176|CCSER1'] 29894 24171 FVVLIVPM True H1975_Epitope_Rep1 916.54559705176 916.54448993586 100.26 2 -2.4580592103428374 0.4676445846477392 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 122804 11393 VGGQPHPP True PC9_epitope_Rep2 787.3976869481099 787.39658993586 49.146 2 -2.458460627375304 0.4676445846477392 1.0 ['ENST00000478619.1_1_3:50374443-50374560:-|nuORF'] 132623 24066 VVFLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 100.29 2 -2.459262628122232 0.4676445846477392 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 77697 25378 NTIQSIIAIIR True PC9_epitope_Rep5 1240.7503211967598 1240.74922993586 102.84 2 -2.459376077830502 0.467660697574158 1.0 ['ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1', 'ENSG00000065135|ENST00000369851|GNAI3', 'GNAI3|p.D94Lfs*18|1|0.1|ENSG00000065135|chr1:109574012-109574013|-/AC|frameshift_variant'] 69594 18140 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 79.474 2 -2.4594099312761095 0.467666295135749 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 112252 17035 TKRALPNN True NCI_RA007_Epitope_Rep4 912.51411368268 912.5130099358599 73.81 2 -2.4606896734139463 0.4676985195154778 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53'] 43216 23803 IFITKALQ True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56840993586 103.15 2 -2.4607139378282645 0.4676985195154778 1.0 ['nc|ENSG00000176273|Q2M3R5-2|SLC35G1', 'ENSG00000176273|ENST00000427197|SLC35G1'] 25869 17938 FFIRLASLCKR True NCI_RA007_Epitope_Rep4 1352.77509647596 1352.77398993586 77.618 2 -2.4613360768823966 0.46771463119709794 1.0 ['ENST00000359039.4_1_9:21334854-21334980:-|nuORF'] 104660 20888 SQTKKLQAK True PC9_epitope_Rep6 1030.61349337078 1030.6129749679299 93.119 1 -2.461432126956298 0.46772022795617524 1.0 ['ENSG00000216937|ENST00000639629|CCDC7'] 72434 22464 MKPAIAPK True PC9_epitope_Rep3 854.5047948689399 854.50368993586 91.684 2 -2.461655288086537 0.4677327781983346 1.0 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 52664 3972 KLVEANNPQ True H1975_Epitope_Rep2 1011.53490869691 1011.53380993586 20.348 2 -2.461976833311618 0.4677327781983346 1.0 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 87952 22103 QRLLFVVF True NCI_RA007_Epitope_Rep3 1020.6120368187999 1020.61092993586 96.044 2 -2.462348146705058 0.4677327781983346 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 126080 23777 VLEKLKFT True NCI_RA007_Epitope_Rep3 976.5957180483199 976.59516496793 103.05 1 -2.462359497922748 0.4677327781983346 1.0 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 112879 21527 TLKKKMGK True PC9_epitope_Rep4 932.5841078187999 932.58300993586 90.983 2 -2.4624021551042907 0.4677327781983346 1.0 ['ENSG00000153531|ENST00000612156|ADPRHL1'] 138910 22969 YKIKYFGF True NCI_RA007_Epitope_Rep5 1064.56950330048 1064.56840993586 95.584 2 -2.4625640906826183 0.4677327781983346 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 119335 25235 VAPAHAPL True PC9_epitope_Rep5 774.4388234841 774.43827496793 102.22 1 -2.4630721472918644 0.46774397039342264 1.0 ['ENST00000556818.1_1_14:64970443-64970746:+|nuORF'] 92205 24314 RLHTGVKRY True NCI_RA007_Epitope_Rep3 1128.651610215 1128.65050993586 105.23 2 -2.4632010765195265 0.46774397039342264 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611'] 124421 14019 VGVFLRQL True PC9_epitope_Rep5 930.5650866263798 930.56398993586 58.94 2 -2.4635598773031293 0.4677446486395559 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 71531 21785 MAAEGGGAAA True PC9_epitope_Rep4 804.3436027699198 804.34250993586 91.99 2 -2.4638764863962304 0.4677446486395559 1.0 ['ENST00000450536.6_1_6:139309287-139309344:-|nuORF'] 120073 13926 VDTPELLRS True PC9_epitope_Rep2 1028.55022440788 1028.54912993586 58.845 2 -2.4640260669181724 0.4677565180824222 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 77649 18095 NTGILNKHL True NCI_RA007_Epitope_Rep1 1008.5716285588001 1008.57052993586 74.528 2 -2.465013599580603 0.4677565180824222 1.0 ['ENSG00000198900|ENST00000361337|TOP1'] 10655 16949 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 70.439 2 -2.465033521819821 0.4677565180824222 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 9549 24479 AWAGGKAG True H1975_Epitope_Rep3 716.3605731633999 716.36002496793 101.89 1 -2.4652353692398976 0.4677565180824222 1.0 ['ENSG00000145214|ENST00000273814|DGKQ', 'DGKQ|p.D469Gfs*53|1|0.15|ENSG00000145214|chr4:966490-966491|-/A|frameshift_variant'] 86207 23653 QIIPGKKYA True NCI_RA007_Epitope_Rep3 1016.6018660579199 1016.60076993586 102.57 2 -2.465792173302681 0.4677634691195795 1.0 ['TMTC3|p.K629Qfs*3|1|0.1|ENSG00000139324|chr12:88192781-88192782|-/C|frameshift_variant', 'ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 37138 6626 GVQCFSRYP True PC9_epitope_Rep3 1055.48585032951 1055.48474993586 30.511 2 -2.465884965603574 0.4677634691195795 1.0 ['CON__Q9U6Y5'] 127503 21437 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 89.519 2 -2.4664365355758453 0.4677634691195795 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 109261 15584 TATHNTSP True NCI_RA007_Epitope_Rep1 827.37734542635 827.3767949679301 64.706 1 -2.466501961321637 0.4677634691195795 1.0 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 120772 26927 VELCSPLE True H1975_Epitope_Rep1 888.4262697647199 888.42516993586 112.28 2 -2.4665647390269263 0.4677634691195795 1.0 ['MDN1|p.R3935C|1|0.1|ENSG00000112159|chr6:89684902-89684902|G/A|missense_variant'] 74709 18000 NGTLNIKHL True NCI_RA007_Epitope_Rep1 1008.5716285588001 1008.57052993586 74.153 2 -2.466893792515508 0.4677690641885499 1.0 ['CD2|p.K93N|1|0.38|ENSG00000116824|chr1:116754848-116754848|A/T|missense_variant'] 10844 19101 CTSRVRQCL True PC9_epitope_Rep2 1064.5219185684 1064.52082993586 78.843 2 -2.4673823299445807 0.4678019552191738 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|356|3|anti-sense'] 124226 12892 VGTFNIIV True NCI_RA007_Epitope_Rep3 861.4960040070499 861.49490993586 57.974 2 -2.4675572250605167 0.4678019552191738 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.L2584Sfs*36|1|0.33|ENSG00000008710|chr16:2105979-2105979|C/-|frameshift_variant', 'ENST00000532739.1_1_16:16459039-16460653:+|nuORF'] 53822 17577 KTERNVKL True NCI_RA007_Epitope_Rep4 986.5872786229398 986.58618993586 76.057 2 -2.467619375745469 0.4678019552191738 1.0 ['nc|ENSG00000229089|Q5CZ79-2|ANKRD20A8P', 'nc|ENSG00000229089|Q5CZ79|ANKRD20A8P', 'ENST00000432432.6_1_2:95480778-95522914:-|nuORF'] 124954 20404 VHSTHAPT True NCI_RA007_Epitope_Rep3 848.41406528824 848.41296993586 88.906 2 -2.4676614500608283 0.4678019552191738 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 94636 25111 RRVVFWERRRR True PC9_epitope_Rep3 1614.9443786020997 1614.94328993586 101.94 2 -2.468032389033795 0.4678089031376465 1.0 ['ENST00000495311.1_1_4:57844993-57845074:+|nuORF'] 29114 26832 FTLGKKPV True PC9_epitope_Rep5 888.5432885526399 888.54274496793 109.57 1 -2.468225223188775 0.4678089031376465 1.0 ['ZNF567|p.N123K|1|0.14|ENSG00000189042|chr19:36719093-36719093|C/A|missense_variant'] 125136 11564 VIGGNKAL True H1975_Epitope_Rep2 770.46503823194 770.46394993586 49.545 2 -2.4682547877380556 0.4678089031376465 1.0 ['ENST00000493965.5_1_9:39078319-39086841:-|nuORF'] 49131 23950 KEKRAAHIL True NCI_RA007_Epitope_Rep3 1064.6454622053998 1064.64487496793 103.77 1 -2.468367034422348 0.4678089031376465 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66', 'nc|ENSG00000166436|O15016-2|TRIM66', 'ENST00000531498.5_1_11:8665946-8673385:-|nuORF', 'nc|ENSG00000166436|O15016-3|TRIM66', 'ENST00000481014.6_1_11:8646046-8673385:-|nuORF'] 135726 20233 WLVKRLHKLC True NCI_RA007_Epitope_Rep1 1294.7696171726998 1294.76850993586 82.907 2 -2.4683847408257433 0.4678089031376465 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 55583 23023 LAHHVRQG True PC9_epitope_Rep6 916.4991323248801 916.49802993586 101.66 2 -2.4687514192805 0.4678144971409351 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'ENST00000519884.1_1_8:22210459-22213015:+|nuORF'] 57936 6767 LEGKEVDESR True PC9_epitope_Rep2 1160.567331024 1160.56567490379 31.436 3 -2.468962195856592 0.4678473828042884 1.0 ['ENSG00000100678|ENST00000356921|SLC8A3', 'nc|ENSG00000100678|P57103-6|SLC8A3', 'nc|ENSG00000100678|P57103-7|SLC8A3', 'nc|ENSG00000100678|P57103|SLC8A3', 'nc|ENSG00000100678|P57103-3|SLC8A3'] 37810 24549 GYFWNRQH True H1975_Epitope_Rep1 1106.5046116281399 1106.5035099358602 101.73 2 -2.4690099477078524 0.4678473828042884 1.0 ['ENSG00000213199|ENST00000349064|ASIC3', 'nc|ENSG00000213199|Q9UHC3-2|ASIC3', 'nc|ENSG00000213199|Q9UHC3-3|ASIC3'] 43776 5611 IHMPLEHN True PC9_epitope_Rep5 989.47528564581 989.4747349679301 26.586 1 -2.4690655261063483 0.4678473828042884 1.0 ['ENSG00000011275|ENST00000389902|RNF216', 'nc|ENSG00000011275|Q9NWF9|RNF216', 'nc|ENSG00000011275|Q9NWF9-3|RNF216'] 102923 21815 SPAWRVHH True H1975_Epitope_Rep2 988.4991323248801 988.49802993586 90.221 2 -2.469336661884262 0.4678473828042884 1.0 ['SMARCC2|p.D1198Rfs*81|1|0.16|ENSG00000139613|chr12:56163734-56163746|TGTGGGGTCTGGA/-|frameshift_variant'] 124303 19046 VGTPGGGG True H1975_Epitope_Rep1 600.2867395168 600.2861949679301 79.394 1 -2.4697773102414673 0.4678480586912194 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A'] 29070 16624 FTHRINIPRR True NCI_RA007_Epitope_Rep3 1308.7527212385999 1308.7516299358601 73.173 2 -2.4698719865716123 0.4678480586912194 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant', 'nc|ENSG00000041982|P24821-6|TNC'] 92437 24359 RLRLRNVFRR True PC9_epitope_Rep4 1384.8640030230797 1384.8629099358602 102.18 2 -2.4700939788275855 0.4678536518713936 1.0 ['ENSG00000105397|ENST00000525621|TYK2'] 61225 24068 LILYHAIFVF True PC9_epitope_Rep2 1234.7114165069 1234.70977490379 98.08 3 -2.4705144299183153 0.4678592449339948 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 32231 10142 GEYGVFAA True NCI_RA007_Epitope_Rep3 812.3704691407598 812.36936993586 46.982 2 -2.4705678047367554 0.4678648378790268 1.0 ['nc|ENSG00000278224|Q2TBC4-2|PRICKLE4', 'nc|ENSG00000278224|Q2TBC4|PRICKLE4', 'ENSG00000278224|ENST00000458694|PRICKLE4', 'ENSG00000124593|ENST00000335515|unknown'] 10517 16667 CLAAGRQI True NCI_RA007_Epitope_Rep5 830.4432572415401 830.44214993586 70.878 2 -2.4707881424409774 0.4678704307064932 1.0 ['ABCB1|p.L545Wfs*40|1|0.34|ENSG00000085563|chr7:87549440-87549440|G/-|frameshift_variant', 'ABCB1|p.H145N|1|0.14|ENSG00000085563|chr7:87566882-87566882|G/T|missense_variant', 'ENSG00000085563|ENST00000622132|ABCB1'] 45086 25055 IPKKKYTRR True PC9_epitope_Rep1 1188.74551059984 1188.7444099358602 101.29 2 -2.4716724225294273 0.4679187379793797 1.0 ['ENSG00000125812|ENST00000338121|GZF1'] 81113 19120 PKARLLRNSFR True NCI_RA007_Epitope_Rep4 1356.81023611472 1356.80912993586 82.691 2 -2.4718542072552574 0.4679187379793797 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3', 'nc|ENSG00000113971|Q7Z494-5|NPHP3', 'nc|ENSG00000113971|Q7Z494-7|NPHP3', 'nc|ENSG00000113971|Q7Z494-4|NPHP3'] 138031 16217 YFYPELFRQFY True H1975_Epitope_Rep3 1571.7449014631497 1571.74380993586 67.835 2 -2.471866481929896 0.4679187379793797 1.0 ['CON__P02662'] 64721 23328 LPWEQREK True H1975_Epitope_Rep2 1084.5665431783598 1084.5654499358602 96.199 2 -2.472231059295807 0.4679194123025507 1.0 ['ENST00000482648.5_1_9:135973382-135973505:-|nuORF'] 48462 9460 KAAQVTAG True PC9_epitope_Rep5 744.4130026590799 744.4124549679301 41.343 1 -2.472255534749191 0.4679194123025507 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 78820 16181 PACICVHF True NCI_RA007_Epitope_Rep4 888.39861554824 888.39750993586 70.175 2 -2.473279766176224 0.4679355137043888 1.0 ['ENST00000233121.6_1_2:27249948-27250056:+|nuORF'] 17192 4789 EGSPPVHFSLP True NCI_RA007_Epitope_Rep2 1165.57677350889 1165.57513490379 23.258 3 -2.4741921924208237 0.4679368615746774 1.0 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'ENST00000525444.1_1_11:12281266-12284064:+|nuORF'] 61846 4766 LLAVTFAA True NCI_RA007_Epitope_Rep5 804.47454028648 804.47344993586 25.016 2 -2.474863887892828 0.4679368615746774 1.0 ['nc|ENSG00000128040|P20155|SPINK2'] 85054 10541 QEILKDKK True NCI_RA007_Epitope_Rep5 1000.5916952970399 1000.59058993586 47.179 2 -2.47503735157846 0.4679368615746774 1.0 ['ENSG00000159307|ENST00000360835|SCUBE1', 'ENST00000518447.1_1_11:9042594-9043530:-|nuORF', 'ENST00000524317.1_1_11:9042594-9047435:-|nuORF', 'nc|ENSG00000175356|Q9NQ36-3|SCUBE2', 'nc|ENSG00000175356|Q9NQ36-2|SCUBE2', 'ENSG00000146197|ENST00000274938|SCUBE3', 'nc|ENSG00000175356|Q9NQ36|SCUBE2', 'nc|ENSG00000146197|Q8IX30-2|SCUBE3', 'ENSG00000175356|ENST00000649792|SCUBE2'] 98753 22877 SGGRVKGV True NCI_RA007_Epitope_Rep3 758.4398861132598 758.43878993586 99.43 2 -2.4751316404070605 0.4679368615746774 1.0 ['ENST00000552949.1_1_12:69753653-69756720:+|nuORF', 'ENSG00000127337|ENST00000247843|YEATS4'] 60023 22247 LGKKPYIC True PC9_epitope_Rep1 920.5153595526399 920.5148149679301 90.39 1 -2.475418305998951 0.46794245299872844 1.0 ['nc|ENSG00000088876|Q6P1L6-2|ZNF343', 'ENSG00000088876|ENST00000278772|ZNF343'] 122716 7383 VGGGYTAK True PC9_epitope_Rep2 751.3864535580699 751.38534993586 33.779 2 -2.4755293881110503 0.4679480443052607 1.0 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'ENST00000487986.1_1_3:193332581-193346300:+|nuORF'] 112205 21427 TKKGSAGP True PC9_epitope_Rep2 744.4130026590799 744.4124549679301 87.891 1 -2.4760521824019004 0.4679641442217762 1.0 ['ENSG00000196531|ENST00000454682|NACA'] 34501 21747 GPNPLMRRY True PC9_epitope_Rep6 1102.57058301298 1102.56948993586 96.542 2 -2.477480949048913 0.4680327868852459 1.0 ['PFKFB3|p.N460Y|1|0.32|ENSG00000170525|chr10:6226228-6226228|A/T|missense_variant'] 15733 16224 ECDDCDSC True PC9_epitope_Rep2 888.1935696015601 888.19246993586 67.652 2 -2.4778678401954024 0.46805939407950736 1.0 ['LAMA3-ZNF521|4|fusion', 'LAMA3-ZNF521|3|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'LAMA3-ZNF521|2|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'LAMA3|p.M1827I|1|0.11|ENSG00000053747|chr18:23894926-23894926|G/T|missense_variant'] 80354 19082 PGGPAPHL True PC9_epitope_Rep4 744.39187329168 744.39132496793 81.489 1 -2.478083501579211 0.4680754923183624 1.0 ['MYH8|p.W133Lfs*30|1|0.12|ENSG00000133020|chr17:10418758-10418759|-/A|frameshift_variant'] 60174 21289 LGPAGKAP True PC9_epitope_Rep1 709.41227438309 709.41172496793 86.715 1 -2.4781988504851893 0.46808108193310427 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-10|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-14|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-11|SLC4A7', 'ENST00000454389.5_2_3:27462227-27462263:-|nuORF'] 11301 20935 DEIRRRRLAR True NCI_RA007_Epitope_Rep4 1339.79089765247 1339.7898099358601 90.723 2 -2.479454966362868 0.46814189047198757 1.0 ['nc|ENSG00000130939|O95155-2|UBE4B', 'UBE4B|p.E1277Cfs*8|1|0.37|ENSG00000130939|chr1:10179542-10179548|CAGAGAG/-|frameshift_variant', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B'] 135495 22964 WIPFIYRGVRV True PC9_epitope_Rep4 1404.80302547596 1404.80137490379 96.55 3 -2.4799404135540475 0.46814189047198757 1.0 ['ENSG00000104356|ENST00000401707|POP1'] 104677 10241 SQTQKAKFS True PC9_epitope_Rep5 1023.5349086969098 1023.5343749679301 44.379 1 -2.4803561482303595 0.46814189047198757 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 135403 13281 WHGGEDEA True NCI_RA007_Epitope_Rep4 899.3409599176299 899.33986993586 58.222 2 -2.4805233238630127 0.46814189047198757 1.0 ['ENSG00000083828|ENST00000396154|ZNF586', 'nc|ENSG00000083828|Q9NXT0-3|ZNF586', 'ENST00000396150.4_1_19:58281140-58291161:+|nuORF'] 125641 25343 VKKTKTDLKH True PC9_epitope_Rep3 1196.7241064489199 1196.72300993586 102.9 2 -2.4810152654084496 0.46814189047198757 1.0 ['PHF12|p.Q258Kfs*12|1|0.0|ENSG00000109118|chr17:28921752-28921753|-/GCCATGACACATGCTTAAGATCTGTTTT|frameshift_variant'] 97345 3821 SECPWPCL True PC9_epitope_Rep5 933.3724603700499 933.37136993586 19.78 2 -2.4811621197823754 0.46814189047198757 1.0 ['ENST00000447767.1_1_20:57099243-57099402:+|nuORF'] 72100 21054 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 87.995 2 -2.481195349074554 0.46814189047198757 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 89174 15821 QVRVLHHRHHR True PC9_epitope_Rep5 1473.82901449669 1473.8279099358601 65.847 2 -2.481203694587588 0.46814189047198757 1.0 ['ENST00000314222.4_1_11:2949785-2950526:-|nuORF'] 20943 8624 EQNWRQHREAY True PC9_epitope_Rep5 1515.69672248411 1515.69508490379 38.115 3 -2.4814118808343406 0.46814189047198757 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 82135 22317 PNHQTPME True NCI_RA007_Epitope_Rep5 952.4072656556399 952.40616993586 92.994 2 -2.482096294140386 0.468147478801761 1.0 ['ENSG00000126249|ENST00000246535|PDCD2L'] 124038 14716 VGSGSKGK True NCI_RA007_Epitope_Rep2 718.3973525949399 718.39680496793 61.914 1 -2.4824631836598425 0.46814768131925844 1.0 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000554777.2_1_14:64068346-64068445:+|nuORF', 'ENST00000473395.1_1_2:198365100-198366019:+|nuORF'] 132656 15985 VVGAERKQ True H1975_Epitope_Rep2 885.50321464581 885.50210993586 66.685 2 -2.482753249630091 0.46814768131925844 1.0 ['ENST00000394111.6_1_2:73143891-73161080:+|nuORF'] 10372 439 CGIRLPNP True NCI_RA007_Epitope_Rep1 868.45890730568 868.45780993586 2.345 2 -2.4832054873776905 0.46814768131925844 1.0 ['MCHR1|p.R325Afs*22|1|0.26|ENSG00000128285|chr22:40681630-40681630|C/-|frameshift_variant', 'ENSG00000128285|ENST00000249016|MCHR1'] 72101 21147 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 88.364 2 -2.4834391840463055 0.46814768131925844 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 9772 19837 AYIPSHSD True H1975_Epitope_Rep1 888.39774651776 888.39664993586 82.551 2 -2.4841480552587725 0.46814768131925844 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 113674 16832 TLWRRNAE True PC9_epitope_Rep2 1044.5464764401197 1044.5453699358602 69.993 2 -2.484352902463134 0.46814768131925844 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 63868 13000 LNMERNNRYQP True PC9_epitope_Rep2 1433.68338091909 1433.6822899358601 55.291 2 -2.4847464948557363 0.46814768131925844 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1294550892743362|0.2468976263073953|2.19|527.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA2_dup2825|chr9:94089083-94095103:-|1.0566696559410955|0.1800513114118117|2.55|512.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|2.1755959222856225|0.2637255971055219|3.04|484.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1'] 97132 24426 SDLWWFPY True PC9_epitope_Rep4 1112.4967322830398 1112.49562993586 102.44 2 -2.4851454455314377 0.46814768131925844 1.0 ['ENST00000379297.5_1_X:23723655-23723897:-|nuORF'] 126198 22365 VLGAHAGA True H1975_Epitope_Rep3 694.37622322754 694.3756749679301 93.505 1 -2.4854456926036668 0.46814768131925844 1.0 ['ENST00000586866.5_2_19:1067558-1068438:+|nuORF'] 55908 7085 LAQQVRVA True PC9_epitope_Rep2 883.5239500903899 883.52284993586 32.648 2 -2.485521911027302 0.46814768131925844 1.0 ['ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 82228 11469 PPARFGAQ True H1975_Epitope_Rep2 842.4398861132597 842.43878993586 49.17 2 -2.485782819505005 0.46814768131925844 1.0 ['ENSG00000101191|ENST00000395343|DIDO1'] 81464 25345 PLFWLFLKILQ True PC9_epitope_Rep5 1416.8533297133197 1416.8522299358601 102.7 2 -2.485855240126591 0.46814768131925844 1.0 ['CPA6|p.C18F|1|0.15|ENSG00000165078|chr8:67746077-67746077|C/A|missense_variant'] 140070 18538 YQKNRKKC True NCI_RA007_Epitope_Rep5 1066.5705830129798 1066.56948993586 78.133 2 -2.486056381651455 0.46814768131925844 1.0 ['ENSG00000173114|ENST00000308478|LRRN3'] 64840 22386 LQDGNHLLF True PC9_epitope_Rep4 1055.5399940773498 1055.53947496793 94.342 1 -2.4864203254740334 0.46814768131925844 1.0 ['ENSG00000170899|ENST00000370963|GSTA4'] 36508 10409 GVGPTPGG True PC9_epitope_Rep5 640.31803964508 640.3174949679301 45.024 1 -2.4864231466481064 0.46814768131925844 1.0 ['ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 62886 22247 LLNIMTTT True PC9_epitope_Rep6 905.4892043744502 905.48810993586 98.53 2 -2.4864850882530143 0.46814768131925844 1.0 ['ADGRG4|p.V2200*|1|0.54|ENSG00000156920|chrX:136350301-136350301|G/-|frameshift_variant', 'nc|ENSG00000156920|Q8IZF6-2|ADGRG4', 'nc|ENSG00000156920|Q8IZF6-3|ADGRG4', 'ENSG00000156920|ENST00000394143|ADGRG4', 'ADGRG4|p.V2188A|1|0.36|ENSG00000156920|chrX:136350269-136350269|T/C|missense_variant'] 53558 16620 KRQGPKEP True NCI_RA007_Epitope_Rep4 938.5297637468199 938.52866993586 72.049 2 -2.4865497814614446 0.46814768131925844 1.0 ['nc|ENSG00000163346|Q96AQ6-3|PBXIP1', 'nc|ENSG00000163346|Q96AQ6-2|PBXIP1', 'ENSG00000163346|ENST00000368463|PBXIP1'] 9775 17982 AYIPSHSD True H1975_Epitope_Rep3 888.39774651776 888.39664993586 75.321 2 -2.4868487137011126 0.46814768131925844 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 32689 24585 GGSKGLVR True H1975_Epitope_Rep3 772.4555361774 772.45442993586 102.3 2 -2.487025835206429 0.46814768131925844 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'PLCH2|p.G185Rfs*37|1|0.2|ENSG00000149527|chr1:2480218-2480219|-/C|frameshift_variant', 'nc|ENSG00000149527|O75038-5|PLCH2'] 36839 23469 GVLHILPIFLF True PC9_epitope_Rep1 1267.7692657361897 1267.7686749679299 95.059 1 -2.487107488976481 0.46814768131925844 1.0 ['ENST00000467438.1_1_1:87597663-87598596:+|nuORF'] 97914 21012 SEMRLEKDRF True PC9_epitope_Rep4 1309.6448701520496 1309.64376993586 88.983 2 -2.4872046608361584 0.46814768131925844 1.0 ['ENSG00000109846|ENST00000650687|CRYAB'] 117140 16387 TVKSSSKP True H1975_Epitope_Rep2 832.4654321547599 832.4648849679301 68.253 1 -2.487221199559353 0.46814768131925844 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 135855 5507 WPFVCWWRYWW True NCI_RA007_Epitope_Rep3 1713.7703454486898 1713.7692499358602 28.663 2 -2.4875222209548045 0.46814768131925844 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 79745 20594 PEAAHPAP True PC9_epitope_Rep6 788.3817025308 788.38115496793 91.943 1 -2.4876815257123406 0.46814768131925844 1.0 ['ENSG00000173404|ENST00000310227|INSM1'] 86376 26705 QKDHFKSQ True NCI_RA007_Epitope_Rep5 1016.5039429218 1016.50284993586 110.43 2 -2.488017649932602 0.46814768131925844 1.0 ['ENSG00000255009|ENST00000530464|UBTFL1'] 142783 14987 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 66.396 2 -2.4880582884873377 0.46814768131925844 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 91033 18187 RFKGGRRK True NCI_RA007_Epitope_Rep1 1003.6151651366298 1003.61406993586 74.886 2 -2.488318201707762 0.46814768131925844 1.0 ['ENST00000335934.8_1_2:24307179-24307821:-|nuORF'] 133182 12424 VVRPEEIP True PC9_epitope_Rep3 937.5232813840499 937.52218993586 52.815 2 -2.488359911873512 0.46814768131925844 1.0 ['ENSG00000114857|ENST00000232978|NKTR', 'ENST00000508351.5_1_3:42675051-42676859:+|nuORF'] 122299 4873 VGAVVRYS True NCI_RA007_Epitope_Rep1 849.4708518883699 849.46974993586 23.034 2 -2.4886788825048556 0.46814768131925844 1.0 ['ENSG00000121904|ENST00000373381|CSMD2', 'nc|ENSG00000121904|Q7Z408|CSMD2'] 75565 18310 NLASTLGLHK True H1975_Epitope_Rep3 1052.59784330664 1052.59674993586 76.736 2 -2.488817890151476 0.46814768131925844 1.0 ['TBL1XR1|p.Q264L|1|0.33|ENSG00000177565|chr3:177047373-177047373|T/A|missense_variant'] 110848 23181 TGQRVCSV True NCI_RA007_Epitope_Rep5 848.4174364165199 848.41632993586 96.426 2 -2.4889077316423482 0.46814768131925844 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 3839 10807 AGVPWMPAP True H1975_Epitope_Rep2 924.4527592960799 924.4522149679301 46.598 1 -2.4893196005969345 0.46814768131925844 1.0 ['ENSG00000188313|ENST00000342435|PLSCR1', 'ENST00000469266.1_1_3:146246325-146262351:-|nuORF', 'ENST00000494568.5_1_3:146239586-146262297:-|nuORF'] 95586 3739 RWVLFHFWFKN True NCI_RA007_Epitope_Rep1 1578.8248235496997 1578.8231849037902 18.518 3 -2.4896487922914683 0.46815326765119847 1.0 ['ENST00000592061.1_1_19:19738235-19738493:-|nuORF'] 9785 19323 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 83.565 2 -2.4901982019537163 0.4681539366439795 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 3430 23305 AGIYRKREEK True PC9_epitope_Rep1 1248.6938689498 1248.69276993586 94.431 2 -2.49038041836415 0.4681539366439795 1.0 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A', 'ENST00000413684.1_1_2:91935968-91936997:-|nuORF'] 791 6564 AAWDPEAP True H1975_Epitope_Rep2 855.3762827971899 855.37573496793 30.159 1 -2.490950356907647 0.46817002594292556 1.0 ['ENSG00000126895|ENST00000646375|AVPR2', 'nc|ENSG00000126895|P30518-2|AVPR2', 'ENST00000434679.5_1_X:153170523-153172179:+|nuORF'] 72437 20640 MKPAIAPK True PC9_epitope_Rep6 854.5047948689399 854.50368993586 92.126 2 -2.49117964501908 0.4681727002531061 1.0 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 142784 15066 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 66.737 2 -2.491320001086232 0.4681727002531061 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 112253 20449 TKRALPNN True PC9_epitope_Rep6 912.51411368268 912.5130099358599 91.373 2 -2.4913469447527885 0.4681727002531061 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53'] 115987 22859 TSKKTGGG True PC9_epitope_Rep4 734.3922672144998 734.39171496793 96.148 1 -2.4921697094037794 0.4681727002531061 1.0 ['ENST00000426393.5_1_1:63786855-63787154:-|nuORF', 'ENST00000418244.5_1_1:63786852-63787391:-|nuORF', 'ENST00000431294.5_1_1:63786852-63789241:-|nuORF'] 106024 9414 SSWLSFTMP True PC9_epitope_Rep5 1054.47936796674 1054.47826993586 41.166 2 -2.4923062263137603 0.4681727002531061 1.0 ['ENST00000306156.7_1_2:45879453-45879507:+|nuORF'] 50081 21091 KKGKGASS True PC9_epitope_Rep3 761.43955176009 761.43844993586 86.409 2 -2.4924258594669215 0.4681727002531061 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 82265 21126 PPGFGSIS True PC9_epitope_Rep5 760.3755545212 760.37444993586 86.321 2 -2.49253317146044 0.4681727002531061 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 74433 11139 NETQKEVP True PC9_epitope_Rep2 943.4610750503098 943.45996993586 48.172 2 -2.4927612208848773 0.4681727002531061 1.0 ['ENSG00000181610|ENST00000313608|MRPS23'] 364 7800 AAKGTQVV True NCI_RA007_Epitope_Rep5 772.4443027873599 772.44320993586 36.705 2 -2.4935757005729307 0.46818453912477287 1.0 ['ENSG00000136542|ENST00000259056|GALNT5'] 132548 11005 VVDTVLAL True NCI_RA007_Epitope_Rep3 828.4956696538799 828.49456993586 50.379 2 -2.494024247277853 0.46818453912477287 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 61412 10791 LITVREPL True PC9_epitope_Rep4 939.5753169569099 939.57420993586 49.266 2 -2.494107555414802 0.46818453912477287 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant', 'FAT4|p.F313L|1|0.17|ENSG00000196159|chr4:125317350-125317350|C/G|missense_variant'] 53659 18212 KSDKGVRK True H1975_Epitope_Rep2 916.5454138109599 916.54430993586 75.49 2 -2.4944277528638508 0.46818453912477287 1.0 ['ENSG00000231192|ENST00000641874|OR5H1', 'OR5H1|p.H244Qfs*26|1|0.4|ENSG00000231192|chr3:98133427-98133428|-/A|frameshift_variant', 'ENSG00000233412|ENST00000641450|OR5H15'] 111836 25081 TILRTWPPW True PC9_epitope_Rep5 1168.6393141958 1168.63820993586 101.61 2 -2.4947423073096706 0.4682062106843935 1.0 ['ENST00000588422.3_1_19:39109887-39111017:+|nuORF'] 47460 15097 IVNRKEHK True NCI_RA007_Epitope_Rep5 1022.59851201298 1022.5974099358599 64.738 2 -2.495023796511458 0.4682062106843935 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4'] 70483 15615 LVVGPQAL True PC9_epitope_Rep6 795.4854393233499 795.48434993586 72.267 2 -2.4953960148274703 0.46824330000840125 1.0 ['ENSG00000119431|ENST00000374180|HDHD3'] 52459 11010 KKSSLVPSTA True PC9_epitope_Rep4 1016.5866099166 1016.58550993586 50.127 2 -2.49546573702817 0.4682446339311967 1.0 ['ENSG00000139767|ENST00000267260|SRRM4'] 29982 17712 FWRFQITIHPP True NCI_RA007_Epitope_Rep3 1440.76663996724 1440.76554993586 77.653 2 -2.495636880462207 0.4682446339311967 1.0 ['TENM1|p.H426P|1|0.42|ENSG00000009694|chrX:124653675-124653675|T/G|missense_variant'] 62780 16236 LLLSDDKN True NCI_RA007_Epitope_Rep5 916.4865615221601 916.48546993586 69.2 2 -2.495682835517421 0.4682446339311967 1.0 ['ENSG00000164309|ENST00000446378|CMYA5'] 81278 26593 PKVVLYKNL True PC9_epitope_Rep3 1072.6644663144798 1072.6633699358601 108.79 2 -2.495734806736166 0.4682446339311967 1.0 ['ENST00000441488.6_1_11:67925157-67938746:-|nuORF', 'ENSG00000110066|ENST00000304363|KMT5B'] 92577 7059 RMPTVLQCV True PC9_epitope_Rep4 1045.54125703065 1045.5401499358602 34.415 2 -2.495895237446407 0.46824663460528804 1.0 ['ENST00000599865.5_1_19:51410192-51411818:-|nuORF', 'ENST00000602148.1_1_19:51410192-51412503:-|nuORF', 'nc|ENSG00000167749|Q9Y5K2|KLK4', 'ENSG00000167749|ENST00000324041|KLK4'] 142787 15311 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 67.783 2 -2.4960336058072605 0.46824663460528804 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 29952 11848 FWEIRYMYFYF True NCI_RA007_Epitope_Rep1 1663.75335797187 1663.75226993586 50.067 2 -2.4962199411468156 0.46824663460528804 1.0 ['nc|ENSG00000196712|P21359-5|NF1'] 95216 24916 RVLARYPG True PC9_epitope_Rep2 930.5399345076999 930.53882993586 101.5 2 -2.4962503303654056 0.46824663460528804 1.0 ['ENST00000369583.3_1_10:112270861-112271212:+|nuORF'] 121161 15938 VESCDCHP True PC9_epitope_Rep2 888.31058838948 888.30948993586 66.553 2 -2.496503092704246 0.46824663460528804 1.0 ['ENST00000439875.1_1_9:115871246-115871747:-|nuORF'] 127466 25170 VNKPQWHKP True PC9_epitope_Rep2 1132.61416207712 1132.61306993586 102.48 2 -2.4965306745067783 0.46824663460528804 1.0 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'nc|ENSG00000109756|Q9Y4G8|RAPGEF2'] 21176 15251 ERDLQHHEAII True NCI_RA007_Epitope_Rep5 1359.6895118453501 1359.6884099358601 65.353 2 -2.496670497891525 0.4682837192208747 1.0 ['ENSG00000103021|ENST00000219299|CCDC113'] 87954 23113 QRLLFVVF True NCI_RA007_Epitope_Rep5 1020.6120368187999 1020.61092993586 96.155 2 -2.496790053357406 0.4682843852704306 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 75180 25795 NHYWYQMYI True H1975_Epitope_Rep2 1316.5648289262 1316.56372993586 105.91 2 -2.4968183397568198 0.4682843852704306 1.0 ['ENSG00000077147|ENST00000371142|TM9SF3'] 82101 14376 PMSEKGKI True NCI_RA007_Epitope_Rep4 888.4738886634799 888.47278993586 62.605 2 -2.4976785873363916 0.46833196833196833 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1'] 86409 19989 QKHPLVFL True NCI_RA007_Epitope_Rep3 980.5807366905199 980.57962993586 87.114 2 -2.4994284853742648 0.46839563208735824 1.0 ['ENST00000296657.6_1_5:10653441-10653774:+|nuORF'] 29895 23666 FVVLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 98.714 2 -2.499475636611701 0.46839563208735824 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 64443 21615 LPPDGHGP True PC9_epitope_Rep1 788.3817025308 788.38115496793 87.968 1 -2.499899821506238 0.46841304005459605 1.0 ['ENST00000359450.6_1_17:27404640-27404928:-|nuORF'] 33314 23668 GKPNKRRGF True PC9_epitope_Rep2 1058.6097454030198 1058.60864993586 96.512 2 -2.499931691738851 0.46841304005459605 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 81130 26018 PKGFVGLK True PC9_epitope_Rep1 844.5170738047999 844.5165249679301 105.29 1 -2.5001119489684593 0.46841304005459605 1.0 ['nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'USP9Y|p.W2351Cfs*39|1|0.47|ENSG00000114374|chrY:12847315-12847315|G/-|frameshift_variant', 'ENSG00000114374|ENST00000338981|USP9Y', 'USP9X|p.L2341Cfs*5|1|0.29|ENSG00000124486|chrX:41225095-41225095|T/-|frameshift_variant', 'ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 89709 15149 RAAKTVAH True NCI_RA007_Epitope_Rep3 852.49298431528 852.49188993586 67.103 2 -2.500297619641045 0.46841304005459605 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 79448 20754 PAVFSGHD True NCI_RA007_Epitope_Rep3 828.3766171503601 828.37552993586 90.39 2 -2.500378440495036 0.46841304005459605 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'ENST00000546525.5_1_6:170034618-170062491:-|nuORF'] 82253 24670 PPFLDHSP True PC9_epitope_Rep3 908.4392174069201 908.43812993586 100.26 2 -2.5005977732404587 0.4684291203830082 1.0 ['ENST00000560131.1_1_15:63356108-63358095:+|nuORF'] 87581 17402 QQLLHTQLL True H1975_Epitope_Rep3 1092.62914343492 1092.62857496793 72.615 1 -2.5009742633089105 0.46843470135542326 1.0 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 129326 20513 VQYLLCWL True H1975_Epitope_Rep3 1036.5415743004799 1036.54046993586 85.746 2 -2.501850469179663 0.4684668605444677 1.0 ['ENST00000261868.9_1_15:44853434-44853497:+|nuORF'] 44227 7111 IKKLKRKPP True PC9_epitope_Rep2 1106.76518341526 1106.76408993586 32.749 2 -2.5018865232119416 0.4684668605444677 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 125167 10949 VIHEDQWI True H1975_Epitope_Rep1 1038.51344497634 1038.51287496793 47.079 1 -2.5020894564562863 0.4684724409448819 1.0 ['ENST00000323387.5_10:47380981-47400428:+|nuORF', 'nc|ENSG00000122376|Q86V20|SHLD2', 'ENSG00000122376|ENST00000298786|SHLD2'] 112251 14684 TKRALPNN True NCI_RA007_Epitope_Rep4 912.51411368268 912.5130099358599 63.897 2 -2.5024632202127086 0.4684780212281236 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53'] 37948 15706 HAASKALR True NCI_RA007_Epitope_Rep5 852.49298431528 852.49188993586 67.131 2 -2.502614511728561 0.46848426312805763 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 125854 25705 VLAHAYAP True PC9_epitope_Rep5 840.4493881678 840.44828993586 104.24 2 -2.5026993436607934 0.46848426312805763 1.0 ['ENSG00000149968|ENST00000299855|MMP3'] 3726 14710 AGSEHPDPEQ True PC9_epitope_Rep3 1065.4363168544498 1065.43520993586 61.722 2 -2.502761265931969 0.46848426312805763 1.0 ['ENST00000252032.9_1_20:3362138-3388256:-|nuORF'] 119174 9563 VAKAGYLH True PC9_epitope_Rep5 857.47593726881 857.47484993586 41.742 2 -2.5038874268366142 0.4685164189132443 1.0 ['nc|ENSG00000087266|P78314-2|SH3BP2', 'ENST00000511663.5_1_4:2811506-2826487:+|nuORF', 'ENST00000511237.5_1_4:2795936-2826487:+|nuORF', 'ENST00000511185.5_1_4:2814082-2826487:+|nuORF', 'ENSG00000087266|ENST00000503393|SH3BP2', 'nc|ENSG00000087266|P78314-3|SH3BP2', 'nc|ENSG00000087266|P78314-4|SH3BP2', 'SH3BP2|p.G25V|1|0.43|ENSG00000087266|chr4:2820691-2820691|G/T|missense_variant'] 56690 11728 LDKNPPQG True H1975_Epitope_Rep1 867.4450310633499 867.4444849679301 50.104 1 -2.5043207465711954 0.4685164189132443 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'ARAP1|p.F360Lfs*31|1|0.27|ENSG00000186635|chr11:72711442-72711442|A/-|frameshift_variant'] 120240 16877 VECMSCSM True NCI_RA007_Epitope_Rep5 888.2849678886 888.28386993586 71.674 2 -2.505493814917788 0.4685315419334523 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 34200 17467 GNINAVHLK True NCI_RA007_Epitope_Rep5 964.54541381096 964.54430993586 73.973 2 -2.505632555329749 0.4685315419334523 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 125538 24968 VKHIEKTT True NCI_RA007_Epitope_Rep5 954.5498304850599 954.54872993586 103.53 2 -2.50618963906545 0.4685315419334523 1.0 ['ENST00000448108.6_1_11:93469276-93469306:-|nuORF'] 49798 21973 KHIPLCAL True PC9_epitope_Rep2 893.5156939058099 893.51458993586 89.996 2 -2.5063242740356833 0.4685315419334523 1.0 ['nc|ENSG00000153246|Q13018-2|PLA2R1', 'ENSG00000153246|ENST00000283243|PLA2R1'] 49656 15937 KGLGGTRH True NCI_RA007_Epitope_Rep3 824.461684187 824.46058993586 70.35 2 -2.5067271897646566 0.4685315419334523 1.0 ['ENST00000305850.9_1_16:81040200-81040455:+|nuORF'] 102413 24548 SLTLLRKKVW True NCI_RA007_Epitope_Rep1 1242.7812274022199 1242.77959490379 101.69 3 -2.5074811973663866 0.4685315419334523 1.0 ['ENST00000508678.1_1_5:14681688-14687767:+|nuORF'] 53883 20008 KTKYRKRLD True NCI_RA007_Epitope_Rep2 1206.71968977482 1206.71858993586 82.829 2 -2.507487118042538 0.4685315419334523 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 15616 14417 EASEQSLKP True PC9_epitope_Rep1 987.4872897981498 987.48618993586 60.279 2 -2.5078809152505968 0.4685315419334523 1.0 ['ENST00000366663.9_1_1:230974343-230974889:-|nuORF'] 53273 26259 KQKIQNNKNH True PC9_epitope_Rep4 1250.68436689526 1250.6832699358602 111.34 2 -2.508027993242345 0.4685315419334523 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 103917 18545 SQALKEHLK True NCI_RA007_Epitope_Rep5 1052.59784330664 1052.59674993586 78.16 2 -2.508139515568388 0.4685315419334523 1.0 ['ZNF142|p.P927Hfs*90|1|0.16|ENSG00000115568|chr2:218643736-218643736|G/-|frameshift_variant', 'ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 93617 23662 RQPVTMET True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 98.343 2 -2.508309744830699 0.4685315419334523 1.0 ['ENST00000563252.2_1_16:30368148-30368268:+|nuORF'] 123764 22371 VGRIPYDII True PC9_epitope_Rep4 1044.59678067748 1044.59568993586 94.283 2 -2.5085709816689867 0.4685315419334523 1.0 ['ENST00000372572.5_2_1:42730832-42744035:-|nuORF'] 112830 3094 TLIRMDFFFT True PC9_epitope_Rep2 1289.6478302741698 1289.64619490379 17.059 3 -2.508713334609336 0.4685315419334523 1.0 ['ENSG00000150873|ENST00000381585|C2orf50'] 113709 6431 TLYQVEKEMEE True NCI_RA007_Epitope_Rep1 1397.6384473589299 1397.6373499358601 29.039 2 -2.508741954878677 0.4685315419334523 1.0 ['nc|ENSG00000089177|Q96L93-5|KIF16B', 'nc|ENSG00000089177|Q96L93-6|KIF16B', 'nc|ENSG00000089177|Q96L93-4|KIF16B', 'ENSG00000089177|ENST00000354981|KIF16B', 'nc|ENSG00000089177|Q96L93-2|KIF16B'] 132609 24292 VVFKKMVP True H1975_Epitope_Rep2 946.5673951254998 946.56628993586 99.963 2 -2.5094555720153973 0.46854534005037785 1.0 ['ENST00000428809.5_1_21:15516217-15516304:+|nuORF'] 11092 20036 DCGGGAGP True NCI_RA007_Epitope_Rep5 632.22242500808 632.22187496793 83.99 1 -2.5098657672969926 0.46854534005037785 1.0 ['ENSG00000171786|ENST00000302101|NHLH1'] 38582 9602 HEWAGGGG True PC9_epitope_Rep3 769.3143512469697 769.3138049679301 41.886 1 -2.5100476359814365 0.46854534005037785 1.0 ['ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ALK|p.Y826Tfs*5|1|0.08|ENSG00000171094|chr2:29233577-29233577|G/-|frameshift_variant'] 82341 21466 PPKRGGPC True PC9_epitope_Rep2 810.4170424936998 810.41649496793 88.043 1 -2.51064864492286 0.46854534005037785 1.0 ['ENST00000598782.1_1_19:4785174-4785513:-|nuORF'] 88617 8179 QTDWTEPWLM True NCI_RA007_Epitope_Rep1 1305.5699738762899 1305.5688699358602 35.811 2 -2.5110296438235915 0.46854534005037785 1.0 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 131849 7498 VTRAISDY True H1975_Epitope_Rep2 923.4712458111899 923.47014993586 33.79 2 -2.5111877832863625 0.46854534005037785 1.0 ['ENSG00000182601|ENST00000331351|HS3ST4', 'HS3ST4|p.I308Tfs*16|1|0.1|ENSG00000182601|chr16:26135800-26135800|T/-|frameshift_variant', 'ENSG00000162040|ENST00000454677|HS3ST6', 'HS3ST6|p.L258Cfs*29|1|0.28|ENSG00000162040|chr16:1911898-1911898|G/-|frameshift_variant', 'ENSG00000122254|ENST00000261374|HS3ST2', 'ENSG00000153976|ENST00000284110|HS3ST3A1', 'HS3ST3A1|p.E356Gfs*19|1|0.32|ENSG00000153976|chr17:13496353-13496354|-/T|frameshift_variant', 'ENSG00000125430|ENST00000360954|HS3ST3B1'] 14217 14577 DSFFGTDT True NCI_RA007_Epitope_Rep5 888.350127619 888.34902993586 62.74 2 -2.5112618736298145 0.46854534005037785 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.M2221Cfs*9|1|0.12|ENSG00000151150|chr10:60074169-60074220|TGCCTTTGCTTAAAACCCGATTGTGGTCATCTTCTTCACTACTGGCTTTCAT/-|frameshift_variant'] 52896 22312 KPGERKKT True PC9_epitope_Rep3 942.5610638750999 942.55996993586 91.108 2 -2.5113631261007514 0.46854534005037785 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 65428 13149 LRGGAFLC True NCI_RA007_Epitope_Rep5 835.43744358511 835.43634993586 57.255 2 -2.5113923487519254 0.46854534005037785 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|309|2|anti-sense'] 62528 26915 LLKAFIAN True PC9_epitope_Rep1 888.54328855264 888.54274496793 109.59 1 -2.511449945086201 0.46854534005037785 1.0 ['ENSG00000197386|ENST00000355072|HTT'] 129164 23269 VQRVFPAC True PC9_epitope_Rep6 918.4745573698198 918.47400496793 102.6 1 -2.5118309096905547 0.46857190835528595 1.0 ['ENSG00000160957|ENST00000617875|RECQL4'] 122671 6114 VGGEEFYFV True PC9_epitope_Rep5 1045.4756624852898 1045.47456993586 28.503 2 -2.5123153041990465 0.46858372251666053 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.N1552Ifs*17|1|0.21|ENSG00000205038|chr8:109443762-109443762|A/-|frameshift_variant'] 99295 26258 SHRQDYLV True NCI_RA007_Epitope_Rep5 1016.5039429217999 1016.50284993586 108.59 2 -2.5123563794923847 0.46858372251666053 1.0 ['ENSG00000182793|ENST00000370989|GSTA5'] 60861 23485 LHVWPILMKK True H1975_Epitope_Rep3 1263.75257012623 1263.75146993586 98.002 2 -2.5125046577176935 0.46858372251666053 1.0 ['ENST00000231572.7_1_5:167943936-167944917:+|nuORF'] 34195 17623 GNINAVHLK True NCI_RA007_Epitope_Rep1 964.54541381096 964.54430993586 72.686 2 -2.513009677823218 0.46858372251666053 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 124095 9167 VGSNVFDM True PC9_epitope_Rep1 867.3796539254699 867.37854993586 40.11 2 -2.513484854029152 0.4686004533624381 1.0 ['nc|ENSG00000188467|Q71RS6-2|SLC24A5', 'SLC24A5|p.L476Ifs*11|1|0.64|ENSG00000188467|chr15:48142273-48142274|-/A|frameshift_variant', 'ENSG00000188467|ENST00000341459|SLC24A5'] 112249 16507 TKRALPNN True NCI_RA007_Epitope_Rep3 912.51411368268 912.5130099358599 72.728 2 -2.5134870357802366 0.4686004533624381 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53'] 116539 17757 TTTTTVTKL True NCI_RA007_Epitope_Rep5 964.54407639828 964.54296993586 75.086 2 -2.5138219596876983 0.4686004533624381 1.0 ['BPTF|p.S2724Wfs*10|1|0.06|ENSG00000171634|chr17:67948171-67948172|-/TGGTTCAAACCAGTTATGAGTAACTATT|frameshift_variant', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 19127 17085 ELGPDPLLAR True PC9_epitope_Rep1 1079.5975089534697 1079.59640993586 70.543 2 -2.5146275200009427 0.4686375132491683 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 122180 10207 VGAKGGGH True H1975_Epitope_Rep1 681.35582213613 681.3552749679301 44.202 1 -2.5149965202640407 0.4686381714957341 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 52915 23824 KPGKAEKSKS True PC9_epitope_Rep4 1058.6084079903399 1058.60730993586 100.06 2 -2.515175412311358 0.4686381714957341 1.0 ['ZNF318|p.D2019Ifs*11|1|0.41|ENSG00000171467|chr6:43337943-43337943|C/-|frameshift_variant', 'ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.S1928Lfs*58|1|0.21|ENSG00000171467|chr6:43338204-43338216|TTCTAGAAGCTGA/-|frameshift_variant', 'ZNF318|p.I1646Lfs*8|1|0.7|ENSG00000171467|chr6:43339063-43339063|G/-|frameshift_variant', 'ZNF318|p.Y1061Lfs*2|1|0.21|ENSG00000171467|chr6:43342770-43342771|-/A|frameshift_variant', 'nc|ENSG00000171467|Q5VUA4-2|ZNF318'] 32362 3095 GFGRHVGI True PC9_epitope_Rep5 841.4558705305699 841.45476993586 16.893 2 -2.515340215071082 0.4686437476388364 1.0 ['ENST00000283429.10_1_16:4524572-4524719:-|nuORF'] 92341 20714 RLNIAIFF True NCI_RA007_Epitope_Rep5 992.58073669052 992.57962993586 86.642 2 -2.515419826116888 0.4686493236649072 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 9776 18062 AYIPSHSD True H1975_Epitope_Rep3 888.39774651776 888.39664993586 75.67 2 -2.5158563127180287 0.4686758872541818 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 36840 23403 GVLHILPIFLF True PC9_epitope_Rep5 1267.7692657361897 1267.7686749679299 95.0 1 -2.51623169321514 0.4686919565559578 1.0 ['ENST00000467438.1_1_1:87597663-87598596:+|nuORF'] 43890 27028 IHVKMTKFGF True PC9_epitope_Rep2 1206.65833538822 1206.6572299358602 111.32 2 -2.5164990502642426 0.4686975319006044 1.0 ['ENST00000534472.5_1_11:125465789-125479519:+|nuORF'] 53001 14510 KPHASLKS True H1975_Epitope_Rep1 866.49740098938 866.49630993586 61.015 2 -2.5167548731600773 0.4687031071282412 1.0 ['THE1B-int_dup2014|chr7:17393836-17395404:-|1.0651537695925049|0.2678596597550775|1.99|520.0|68|2|anti-sense'] 40809 13542 HSAKSGGS True NCI_RA007_Epitope_Rep5 729.34056599481 729.3400149679301 58.775 1 -2.5177484350951547 0.4687142572324998 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.G1947Wfs*3|1|0.14|ENSG00000049618|chr6:157207017-157207018|-/T|frameshift_variant', 'ARID1B|p.G858Rfs*71|1|0.35|ENSG00000049618|chr6:157148676-157148677|-/G|frameshift_variant', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B'] 92340 20629 RLNIAIFF True NCI_RA007_Epitope_Rep5 992.58073669052 992.57962993586 86.294 2 -2.518052568973397 0.4687142572324998 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 74649 22222 NGLMFVKL True PC9_epitope_Rep3 920.5153595526399 920.5142699358599 90.762 2 -2.519899426420389 0.4687260631879374 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 38934 14595 HHHAQAHK True NCI_RA007_Epitope_Rep5 964.4739802062 964.4728899358599 62.809 2 -2.5199830511764736 0.4687260631879374 1.0 ['POLE|p.Y1490H|1|0.53|ENSG00000177084|chr12:132643307-132643307|A/G|missense_variant'] 25373 9761 FEALGTAL True PC9_epitope_Rep1 820.43306939732 820.43196993586 42.404 2 -2.520029300351252 0.4687260631879374 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant', 'nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5'] 54406 19662 KYFLFLFNLI True NCI_RA007_Epitope_Rep5 1316.7532813188798 1316.75218993586 82.543 2 -2.520130469833373 0.4687260631879374 1.0 ['ENST00000529853.1_1_11:44609006-44616389:+|nuORF', 'ENST00000525898.5_1_11:44609042-44626792:+|nuORF', 'nc|ENSG00000085117|P27701-2|CD82', 'ENSG00000085117|ENST00000227155|CD82'] 93550 21259 RQLIMQKYQ True PC9_epitope_Rep6 1206.65431263694 1206.65320993586 94.625 2 -2.5213407792535194 0.46876573778747693 1.0 ['ENST00000421692.5_2_6:30025314-30028582:-|nuORF'] 34198 17119 GNINAVHLK True NCI_RA007_Epitope_Rep4 964.54541381096 964.54430993586 74.165 2 -2.5221332158579504 0.46876573778747693 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 82809 19550 PRRRRRREER True NCI_RA007_Epitope_Rep3 1465.85629187369 1465.85464490379 85.279 3 -2.5222130904423867 0.46876573778747693 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 132624 18440 VVFLIVPM True NCI_RA007_Epitope_Rep3 916.54559705176 916.54448993586 80.714 2 -2.5222236786042957 0.46876573778747693 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 137973 22943 YFLLALAA True PC9_epitope_Rep3 880.5058404147599 880.50474993586 93.516 2 -2.52226234698194 0.46876573778747693 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'nc|ENSG00000169247|Q8TF17-2|SH3TC2'] 52412 20279 KKRFWIIE True NCI_RA007_Epitope_Rep5 1118.6600496403796 1118.6589499358602 84.943 2 -2.5223245330606896 0.46876573778747693 1.0 ['ENSG00000130940|ENST00000377022|CASZ1'] 57928 22533 LEGIKVGHERK True PC9_epitope_Rep2 1264.7251690780797 1264.7240699358601 92.163 2 -2.522588557253155 0.46876573778747693 1.0 ['ENSG00000178467|ENST00000383729|P4HTM', 'nc|ENSG00000178467|Q9NXG6-3|P4HTM', 'nc|ENSG00000178467|Q9NXG6-2|P4HTM', 'ENST00000472301.5_1_3:49027419-49042675:+|nuORF'] 127502 20160 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 84.492 2 -2.5229194965504993 0.46876573778747693 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 55085 24687 LAAAAHDV True H1975_Epitope_Rep1 766.39735259494 766.39680496793 102.27 1 -2.522938176377659 0.46876573778747693 1.0 ['ENSG00000171408|ENST00000308191|PDE7B'] 100396 6254 SKVWNDLR True PC9_epitope_Rep2 1016.5403284305199 1016.53922993586 29.453 2 -2.5234678694882193 0.4687713113636125 1.0 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 125645 16841 VKKTTEAT True NCI_RA007_Epitope_Rep5 876.4916469026 876.49054993586 71.528 2 -2.5237278191163965 0.4687768848227962 1.0 ['ENST00000537556.1_1_12:64238596-64474299:+|nuORF', 'nc|ENSG00000196935|Q7Z6B7-2|SRGAP1', 'ENSG00000196935|ENST00000355086|SRGAP1'] 37381 7520 GVSMDERKK True PC9_epitope_Rep2 1048.5335287979199 1048.5324299358601 34.293 2 -2.5241698083177075 0.46880901422636284 1.0 ['SURF4|p.K265R|1|0.2|ENSG00000148248|chr9:133363509-133363509|T/C|missense_variant'] 52604 24857 KLLILRCFR True PC9_epitope_Rep6 1160.72160435112 1160.72050993586 110.41 2 -2.5243346594199076 0.46880901422636284 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 85887 18194 QHFEEQSVP True PC9_epitope_Rep4 1099.4934378077498 1099.4923499358601 78.05 2 -2.524736671319059 0.4688096686879708 1.0 ['nc|ENSG00000140563|Q6DN12-2|MCTP2', 'ENSG00000140563|ENST00000357742|MCTP2'] 125117 24598 VIFPDVSH True NCI_RA007_Epitope_Rep1 912.4705175352001 912.46942993586 101.88 2 -2.5247790846649165 0.4688096686879708 1.0 ['ENST00000381482.7_1_20:2125208-2125481:+|nuORF'] 6957 18614 AQKLSEIHK True NCI_RA007_Epitope_Rep2 1052.59784330664 1052.59674993586 77.202 2 -2.525146887777462 0.4688152414523862 1.0 ['ENSG00000174607|ENST00000310836|UGT8', 'UGT8|p.Q436E|1|0.37|ENSG00000174607|chr4:114675968-114675968|C/G|missense_variant'] 94368 23758 RRRQKGKKEIE True PC9_epitope_Rep2 1426.84807817542 1426.8469899358602 96.858 2 -2.5259347872517526 0.4688345746354768 1.0 ['ENST00000381813.4_1_2:10197463-10197871:-|nuORF'] 98787 22151 SGKAHLRA True PC9_epitope_Rep6 838.47733425114 838.47622993586 98.145 2 -2.526290104731485 0.4688345746354768 1.0 ['ENSG00000183128|ENST00000369783|CALHM3'] 9774 20349 AYIPSHSD True H1975_Epitope_Rep1 888.39774651776 888.39664993586 84.635 2 -2.5262902888674437 0.4688345746354768 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 45041 13312 IPGSVESQRV True H1975_Epitope_Rep2 1070.57202248162 1070.57092993586 56.334 2 -2.526352599647282 0.4688345746354768 1.0 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 74631 21042 NGKHVPRA True PC9_epitope_Rep6 877.48823328801 877.48712993586 93.758 2 -2.5269721684697446 0.4688345746354768 1.0 ['ENSG00000183785|ENST00000330423|TUBA8'] 30181 7057 FYQILSNKKPE True NCI_RA007_Epitope_Rep2 1365.7292513990099 1365.72760490379 32.073 3 -2.5270505707952777 0.4688345746354768 1.0 ['ENSG00000109063|ENST00000583535|MYH3', 'MYH3|p.L993*|1|0.11|ENSG00000109063|chr17:10639422-10639422|A/-|frameshift_variant', 'MYH3|p.C793Afs*31|1|0.13|ENSG00000109063|chr17:10640382-10640382|A/-|frameshift_variant', 'MYH6|p.A374Rfs*18|1|0.13|ENSG00000197616|chr14:23402485-23402485|C/-|frameshift_variant', 'ENST00000557461.1_1_14:23869380-23876432:-|nuORF', 'ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.D1019Tfs*6|1|0.18|ENSG00000264424|chr17:10453208-10453208|C/-|frameshift_variant', 'MYH4|p.N665Tfs*2|1|0.48|ENSG00000264424|chr17:10455878-10455878|G/-|frameshift_variant'] 56261 12611 LCTYVIHI True NCI_RA007_Epitope_Rep5 960.5102741722001 960.50916993586 55.161 2 -2.527388746542963 0.4688345746354768 1.0 ['GJA9|p.P439Qfs*23|1|0.53|ENSG00000131233|chr1:38874770-38874783|GAGGTTACCTTTAG/-|frameshift_variant', 'nc|ENSG00000131233|P57773-2|GJA9', 'ENSG00000131233|ENST00000357771|GJA9'] 55367 20149 LAEPEAKRIRL True NCI_RA007_Epitope_Rep1 1294.7721192704998 1294.77046490379 82.584 3 -2.5275184285606374 0.4688345746354768 1.0 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF', 'DUS3L|p.E258Kfs*28|1|0.17|ENSG00000141994|chr19:5789335-5789335|C/-|frameshift_variant'] 69599 18064 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 76.28 2 -2.5278556361700297 0.4688345746354768 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 110931 22937 TGYYLPKK True H1975_Epitope_Rep1 968.5331177917599 968.53202993586 95.377 2 -2.527869501029924 0.4688345746354768 1.0 ['ADAM22|p.C433Hfs*48|1|0.25|ENSG00000008277|chr7:88143101-88143102|-/CA|frameshift_variant', 'nc|ENSG00000008277|Q9P0K1-4|ADAM22', 'nc|ENSG00000008277|Q9P0K1-3|ADAM22', 'nc|ENSG00000008277|Q9P0K1-5|ADAM22', 'nc|ENSG00000008277|Q9P0K1-2|ADAM22', 'nc|ENSG00000008277|Q9P0K1|ADAM22', 'ENSG00000008277|ENST00000413139|ADAM22'] 82092 22700 PMPMKRGP True H1975_Epitope_Rep1 912.4673638144 912.4662699358599 94.425 2 -2.528436167428398 0.4688345746354768 1.0 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2'] 87965 23350 QRMCLYVG True NCI_RA007_Epitope_Rep3 968.4571930535197 968.45608993586 101.4 2 -2.528914735984987 0.46884014643715055 1.0 ['ENST00000429989.7_1_10:82277765-82278146:+|nuORF'] 14302 10224 DSVPPGGS True NCI_RA007_Epitope_Rep5 714.3184335679 714.31788496793 45.959 1 -2.530124135564593 0.4688568611408312 1.0 ['nc|ENSG00000089472|Q9BQS7-2|HEPH', 'ENSG00000089472|ENST00000343002|HEPH', 'nc|ENSG00000089472|Q9BQS7-3|HEPH'] 82290 12029 PPHGGGGAP True PC9_epitope_Rep3 745.35073675569 745.3501849679301 51.301 1 -2.5301897390215484 0.4688568611408312 1.0 ['ENST00000600059.5_1_19:48988799-49002658:-|nuORF'] 50031 22580 KKCVVIDL True PC9_epitope_Rep1 916.5415743004799 916.54046993586 91.662 2 -2.530202796294405 0.4688568611408312 1.0 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 39694 22287 HLSHGKRD True PC9_epitope_Rep6 948.488961564 948.48786993586 98.699 2 -2.530691375455762 0.4688834111291761 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|40|1|sense'] 123505 10119 VGPHAAVP True NCI_RA007_Epitope_Rep1 746.40752335582 746.4069749679301 43.371 1 -2.531350646254507 0.4688889821263741 1.0 ['ENSG00000236446|ENST00000371311|CT47B1'] 116966 21212 TVGIGGKN True PC9_epitope_Rep5 744.41300265908 744.4124549679301 86.64 1 -2.532562471758169 0.4689155312208272 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.I4406Sfs*8|1|0.19|ENSG00000157423|chr16:70837716-70837716|T/-|frameshift_variant', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 90759 19779 RERRKSLFK True NCI_RA007_Epitope_Rep4 1218.7309231648599 1218.7292849037901 85.481 3 -2.5330166967458174 0.46893159076129143 1.0 ['ENSG00000099308|ENST00000687212|MAST3'] 92339 20457 RLNIAIFF True NCI_RA007_Epitope_Rep4 992.58073669052 992.57962993586 88.591 2 -2.5331684703737474 0.46893224250052445 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 19349 24861 ELLIKTKKEK True PC9_epitope_Rep2 1228.77547331544 1228.77436993586 101.3 2 -2.5332886715302596 0.46893224250052445 1.0 ['nc|ENSG00000109111|Q7KZ85-2|SUPT6H', 'ENSG00000109111|ENST00000314616|SUPT6H'] 38702 23965 HGDTALHA True NCI_RA007_Epitope_Rep1 820.3827651599601 820.38166993586 99.189 2 -2.5338023151886953 0.4689483013603801 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 40916 20133 HSRFLQGHEKT True PC9_epitope_Rep1 1338.6792815148196 1338.67818993586 82.271 2 -2.5338796949582765 0.46895387132638294 1.0 ['ENSG00000196466|ENST00000430385|ZNF799', 'nc|ENSG00000196466|Q96GE5-2|ZNF799', 'ENSG00000180855|ENST00000301547|ZNF443'] 34197 16671 GNINAVHLK True NCI_RA007_Epitope_Rep3 964.54541381096 964.54430993586 73.385 2 -2.5352666642363038 0.4689804180694965 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 23162 16421 EVLCKNLA True NCI_RA007_Epitope_Rep4 888.4738886634799 888.47278993586 71.171 2 -2.535811730251448 0.46898598758180904 1.0 ['nc|ENSG00000125107|A5YKK6-2|CNOT1', 'ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 139377 6439 YLMKYHSM True PC9_epitope_Rep1 1071.48815882863 1071.48706993586 29.574 2 -2.5367840297460797 0.46901253343122346 1.0 ['ENSG00000189037|ENST00000339042|DUSP21'] 132628 25015 VVFLIVPM True PC9_epitope_Rep1 916.54559705176 916.54448993586 101.15 2 -2.537305421664423 0.46902859060684243 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 93637 26109 RQQRTQAHL True NCI_RA007_Epitope_Rep5 1136.6162873354397 1136.6151899358601 108.01 2 -2.5387899276989807 0.46906135291033035 1.0 ['ENSG00000188959|ENST00000400613|C9orf152'] 9784 18928 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 81.853 2 -2.538949116699789 0.46906135291033035 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 53923 19197 KTPKKKMKM True H1975_Epitope_Rep2 1118.66679189694 1118.6656899358602 79.679 2 -2.538959708520835 0.46906135291033035 1.0 ['ENST00000491428.1_1_1:218458703-218475928:+|nuORF', 'ENSG00000067533|ENST00000366932|RRP15'] 46401 9479 ISSHQHGG True H1975_Epitope_Rep3 821.3780141326899 821.3774649679301 41.466 1 -2.538981623833738 0.46906135291033035 1.0 ['nc|ENSG00000068745|Q9UHH9-6|IP6K2'] 3332 21166 AGGKSTKP True PC9_epitope_Rep3 744.4130026590799 744.4124549679301 86.703 1 -2.540134998620377 0.4690878962989376 1.0 ['ENST00000531092.5_1_6:2249133-2397616:+|nuORF'] 80023 23050 PFFKKPFFFH True PC9_epitope_Rep6 1340.7069998327997 1340.70590993586 101.76 2 -2.5404291167761186 0.4690885446708546 1.0 ['ENST00000377102.5_1_13:80913253-80913610:-|nuORF'] 46966 18335 ITPPPAKK True H1975_Epitope_Rep3 850.5276384885 850.52654993586 76.841 2 -2.5404742693547897 0.4690885446708546 1.0 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 38580 9576 HEWAGGGG True PC9_epitope_Rep1 769.3143512469697 769.3138049679301 41.691 1 -2.541177496618614 0.4690947606862704 1.0 ['ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ALK|p.Y826Tfs*5|1|0.08|ENSG00000171094|chr2:29233577-29233577|G/-|frameshift_variant'] 142245 22288 YWRGNCKKA True NCI_RA007_Epitope_Rep5 1124.55493294884 1124.5538299358602 92.879 2 -2.541185855263093 0.4690947606862704 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 113432 23449 TLSLKDRR True PC9_epitope_Rep2 987.58252759567 987.58142993586 95.668 2 -2.5412133057010595 0.4690947606862704 1.0 ['ENSG00000011114|ENST00000334746|BTBD7'] 72826 24910 MPMELPIF True H1975_Epitope_Rep2 976.4761971625999 976.47508993586 102.39 2 -2.5413468663502745 0.4691003282401921 1.0 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant', 'ZFHX3|p.S2241Kfs*30|1|0.48|ENSG00000140836|chr16:72795962-72795963|-/C|frameshift_variant'] 129900 15891 VRSKQLNP True NCI_RA007_Epitope_Rep3 940.54541381096 940.54430993586 70.163 2 -2.5422739555692315 0.46911638247446463 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.R1460Pfs*51|1|0.28|ENSG00000128591|chr7:128847783-128847784|-/C|frameshift_variant'] 49842 22789 KIAFYRRQK True PC9_epitope_Rep6 1208.7142104715597 1208.71310993586 100.75 2 -2.5424368410508347 0.46912194968487503 1.0 ['ENSG00000214013|ENST00000318010|GANC'] 61694 24935 LKVYDLVK True H1975_Epitope_Rep3 976.5957180483199 976.59462993586 103.73 2 -2.544299465912708 0.4691392978482446 1.0 ['ENSG00000112365|ENST00000230122|ZBTB24', 'nc|ENSG00000112365|O43167-2|ZBTB24'] 52890 17117 KPGERKKT True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 72.611 2 -2.5443930741673118 0.4691392978482446 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 72427 25333 MKMKKINKDR True PC9_epitope_Rep2 1290.72643203138 1290.7253299358601 103.12 2 -2.5446184346510226 0.4691392978482446 1.0 ['ENSG00000078399|ENST00000343483|HOXA9', 'ENST00000497089.1_1_7:27203224-27209021:-|nuORF'] 102109 17018 SLRLADRRPRR True NCI_RA007_Epitope_Rep1 1394.83309681762 1394.83198993586 70.324 2 -2.545061677670125 0.4691392978482446 1.0 ['ENST00000418115.5_1_3:49449256-49449346:-|nuORF'] 82875 24800 PRVIPNVH True PC9_epitope_Rep1 930.5399345077001 930.53882993586 100.28 2 -2.5450666837878604 0.4691392978482446 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 138026 13449 YFYIWPFSR True NCI_RA007_Epitope_Rep5 1277.6233297784897 1277.62222993586 58.417 2 -2.5463024379543597 0.46920778063230745 1.0 ['OR4K1|p.P266T|1|0.04|ENSG00000155249|chr14:19936462-19936462|C/A|missense_variant', 'ENSG00000155249|ENST00000641172|OR4K1'] 35279 11136 GRGGPDGHP True NCI_RA007_Epitope_Rep5 848.38891316956 848.38780993586 49.47 2 -2.546413111151275 0.46921334647568314 1.0 ['ENST00000447110.5_1_17:8814820-8869022:-|nuORF', 'ENST00000583222.1_1_17:8820058-8869022:-|nuORF'] 44442 23854 ILHYDETY True H1975_Epitope_Rep2 1052.4814761417201 1052.4803699358602 98.263 2 -2.546557679716648 0.46921399211475545 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 133412 23165 VVVRHPLS True H1975_Epitope_Rep2 905.5446855349699 905.54358993586 95.564 2 -2.546661235132261 0.46921399211475545 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 132619 24509 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 100.83 2 -2.5474522359319134 0.46921955771791674 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 83782 22399 PVKKGVPM True PC9_epitope_Rep1 854.5047948689399 854.50368993586 90.977 2 -2.548631369400991 0.46925657963720246 1.0 ['nc|ENSG00000061794|P82673-2|MRPS35', 'MRPS35|p.N275Yfs*6|1|0.04|ENSG00000061794|chr12:27755299-27755300|-/ATATC|frameshift_variant', 'ENSG00000061794|ENST00000081029|MRPS35'] 9773 20174 AYIPSHSD True H1975_Epitope_Rep1 888.39774651776 888.39664993586 83.948 2 -2.5488270585345116 0.46928311541244194 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 52895 22770 KPGERKKT True PC9_epitope_Rep2 942.5610638750999 942.55996993586 93.077 2 -2.549849997185694 0.46932570014574354 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 142792 21111 YYRQGCAS True PC9_epitope_Rep5 946.3967009719398 946.39560993586 86.269 2 -2.5498769369519625 0.46932570014574354 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 56473 17394 LDERANLPEI True PC9_epitope_Rep3 1168.6088019131598 1168.6077099358602 72.075 2 -2.55088420186024 0.46934026540324103 1.0 ['ENST00000587908.1_1_19:56832840-56833431:-|nuORF'] 95022 20226 RTRLRNRRY True NCI_RA007_Epitope_Rep2 1289.7541182209297 1289.75302993586 83.705 2 -2.552100629006117 0.46934026540324103 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 9777 19403 AYIPSHSD True H1975_Epitope_Rep3 888.39774651776 888.39664993586 81.319 2 -2.552154608077405 0.46934026540324103 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 93840 25210 RRCRRRLREAR True PC9_epitope_Rep2 1526.89129748342 1526.8902099358602 102.64 2 -2.5522519167657514 0.46934026540324103 1.0 ['ENST00000456859.2_1_12:57066766-57082127:-|nuORF'] 25847 25102 FFFLFPRRRRR True PC9_epitope_Rep1 1596.9266032796397 1596.9255099358602 101.44 2 -2.552446050037599 0.46934026540324103 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 49671 22632 KGPKKVEKY True PC9_epitope_Rep6 1075.6389798426299 1075.6378899358601 100.1 2 -2.5525095991369815 0.46934026540324103 1.0 ['ENST00000487211.5_1_20:55043753-55046687:+|nuORF'] 142782 14905 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 66.061 2 -2.5531286343855855 0.46934026540324103 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 39760 22769 HLVQHGKI True PC9_epitope_Rep6 930.5399345077 930.53882993586 100.67 2 -2.553175590679911 0.46934026540324103 1.0 ['ENSG00000171817|ENST00000316433|ZNF540', 'nc|ENSG00000171817|Q8NDQ6-2|ZNF540', 'nc|ENSG00000171817|Q8NDQ6-4|ZNF540', 'ENST00000589285.1_1_19:38102250-38104161:+|nuORF'] 91781 19433 RKGIMKIMV True NCI_RA007_Epitope_Rep5 1074.6405771491 1074.63946993586 81.636 2 -2.5532057104096797 0.46934026540324103 1.0 ['ENSG00000130772|ENST00000373842|MED18'] 72421 24815 MKLWKKRW True NCI_RA007_Epitope_Rep5 1174.6797395391397 1174.6786499358602 102.94 2 -2.553556202184329 0.46934026540324103 1.0 ['AEBP2-PLEKHA5|7|fusion', 'AEBP2-PLEKHA5|6|fusion', 'AEBP2-PLEKHA5|8|fusion', 'AEBP2-PLEKHA5|5|fusion', 'ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5'] 124163 14134 VGSSVKAN True NCI_RA007_Epitope_Rep5 760.40791727864 760.4073649679301 61.056 1 -2.5537505185108746 0.46934026540324103 1.0 ['ENST00000466239.5_1_6:32133908-32133956:+|nuORF', 'ENST00000421600.2_3_6:32132434-32133956:+|nuORF', 'ENST00000585246.5_1_6:32123472-32133959:+|nuORF'] 123556 24053 VGPQKTGT True H1975_Epitope_Rep3 786.42356734278 786.42301496793 100.24 1 -2.553881363867872 0.46934026540324103 1.0 ['ENSG00000166507|ENST00000309979|NDST2'] 59598 16812 LFVRHRTQ True PC9_epitope_Rep4 1055.59884636615 1055.59827496793 72.639 1 -2.555105418423938 0.46934026540324103 1.0 ['ENSG00000169021|ENST00000304863|UQCRFS1', 'nc|ENSG00000226085|P0C7P4|UQCRFS1P1'] 38700 23716 HGDTALHA True H1975_Epitope_Rep1 820.3827651599601 820.38166993586 98.458 2 -2.5552130800155215 0.46934026540324103 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 52635 19675 KLQLHACLLF True NCI_RA007_Epitope_Rep2 1184.6739854523598 1184.67232490379 81.481 3 -2.5554668814772152 0.46934026540324103 1.0 ['ENST00000261479.8_1_14:35782236-35783624:+|nuORF'] 52902 22570 KPGERKKT True PC9_epitope_Rep5 942.5610638750999 942.55996993586 91.82 2 -2.5560587590157358 0.46934026540324103 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 123535 6857 VGPPGPAR True NCI_RA007_Epitope_Rep4 749.41842239269 749.41732993586 32.996 2 -2.556153301881846 0.46934026540324103 1.0 ['COL4A4|p.G867R|1|0.2|ENSG00000081052|chr2:227056062-227056062|C/G|missense_variant'] 87838 18843 QRGLVWPG True H1975_Epitope_Rep2 911.4977353425498 911.49662993586 78.236 2 -2.556345785098186 0.46934026540324103 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 20525 10086 EPPPCPPL True NCI_RA007_Epitope_Rep3 848.4102257777599 848.4096749679301 46.765 1 -2.5569170317457153 0.46934026540324103 1.0 ['ENST00000237455.4_1_2:86850525-86850729:-|nuORF'] 92190 26650 RLGGGSSR True H1975_Epitope_Rep3 788.42529867828 788.42420993586 111.29 2 -2.5569417512614696 0.46934026540324103 1.0 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'ENST00000578269.5_1_17:7123303-7123672:+|nuORF', 'ENST00000581562.5_1_17:7123303-7125294:+|nuORF', 'ENST00000577191.5_1_17:7123303-7125473:+|nuORF', 'ENST00000582056.5_1_17:7123303-7124179:+|nuORF'] 36823 13940 GVLFVLLM True H1975_Epitope_Rep1 890.52994698762 890.5293949679301 58.775 1 -2.5569540125872776 0.46934026540324103 1.0 ['nc|ENSG00000135472|Q9BWQ8-2|FAIM2', 'ENSG00000135472|ENST00000320634|FAIM2'] 127874 25066 VPGDVGTL True PC9_epitope_Rep2 756.40176926904 756.40066993586 102.08 2 -2.557004357383901 0.46934026540324103 1.0 ['ENST00000533321.1_1_11:57510328-57510427:+|nuORF'] 105966 26509 SSSSSSGT True H1975_Epitope_Rep3 698.2718772983001 698.27132496793 110.67 1 -2.55733841317337 0.46934026540324103 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 82873 22253 PRVIPNVH True NCI_RA007_Epitope_Rep5 930.5399345077001 930.53882993586 92.745 2 -2.5581907605921503 0.46934026540324103 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 53454 23801 KRFFFIVF True PC9_epitope_Rep3 1102.6327722633798 1102.6316699358601 96.837 2 -2.5581948961779246 0.46934026540324103 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 54221 23420 KVYMVRLGK True PC9_epitope_Rep2 1092.6477707045199 1092.64666993586 95.558 2 -2.558196306026955 0.46934026540324103 1.0 ['CAPN6|p.R283Gfs*11|1|0.19|ENSG00000077274|chrX:111251586-111251596|AGGGGTTTCTC/-|frameshift_variant'] 61622 25439 LKMRGIIKV True NCI_RA007_Epitope_Rep1 1056.68415621324 1056.68304993586 105.27 2 -2.5582159847747814 0.46934026540324103 1.0 ['ENST00000314759.5_1_13:21736000-21742172:-|nuORF'] 44063 18866 IILFGWII True NCI_RA007_Epitope_Rep4 973.6000751527699 973.5989699358599 81.591 2 -2.558565819768214 0.46934026540324103 1.0 ['ENSG00000261115|ENST00000565468|TMEM178B'] 60261 12335 LGRGPGNP True NCI_RA007_Epitope_Rep5 766.4085859849799 766.40748993586 54.095 2 -2.558617878463843 0.46934026540324103 1.0 ['ENST00000382952.7_2_4:1205816-1205999:-|nuORF'] 44441 23575 ILHYDETY True H1975_Epitope_Rep2 1052.4814761417201 1052.4803699358602 97.17 2 -2.5592799121505716 0.4693421935267483 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 141562 4855 YTNVEQDAETN True NCI_RA007_Epitope_Rep5 1282.5313394380996 1282.5302499358602 25.367 2 -2.5593003569765584 0.4693421935267483 1.0 ['DCAF6|p.G730Vfs*5|1|0.18|ENSG00000143164|chr1:168065609-168065609|G/-|frameshift_variant', 'nc|ENSG00000143164|Q58WW2|DCAF6', 'nc|ENSG00000143164|Q58WW2-2|DCAF6', 'nc|ENSG00000143164|Q58WW2-4|DCAF6', 'ENSG00000143164|ENST00000367840|DCAF6', 'ENST00000560524.1_1_15:29526351-29527221:-|nuORF'] 38704 22786 HGDTALHA True NCI_RA007_Epitope_Rep3 820.3827651599601 820.38166993586 99.061 2 -2.559407075798064 0.4693421935267483 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 68815 26729 LTLQPGFW True H1975_Epitope_Rep1 960.5069030439199 960.50580993586 111.3 2 -2.5594828832117495 0.4693421935267483 1.0 ['ENST00000591875.1_1_16:5110243-5115909:-|nuORF', 'ENSG00000153446|ENST00000472572|C16orf89', 'nc|nan|Q6UX73|C16orf89'] 43466 20267 IGHELLKP True PC9_epitope_Rep1 905.5334521449299 905.5329049679301 82.788 1 -2.5595386198419896 0.4693421935267483 1.0 ['ENST00000584476.1_1_17:55334873-55339700:+|nuORF'] 15063 6237 DYQVYRSWWLW True PC9_epitope_Rep4 1600.7462984454799 1600.7446649037902 31.037 3 -2.5596075657102393 0.4693421935267483 1.0 ['ENST00000355622.6_1_9:120474773-120474821:+|nuORF'] 71544 26749 MALLRLFRML True PC9_epitope_Rep5 1262.7355401631 1262.73444993586 109.14 2 -2.559772371992963 0.46935823664434173 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.T1460Lfs*26|1|0.09|ENSG00000136546|chr2:166406252-166406252|C/-|frameshift_variant', 'SCN7A|p.S811Afs*35|1|0.25|ENSG00000136546|chr2:166432479-166432479|T/-|frameshift_variant', 'SCN7A|p.S1073Vfs*5|1|0.14|ENSG00000136546|chr2:166416904-166416904|T/-|frameshift_variant'] 81480 20151 PLGHAVLS True NCI_RA007_Epitope_Rep4 792.4493881678001 792.44828993586 87.188 2 -2.5606813778234345 0.4693637983439891 1.0 ['ENST00000503000.1_1_4:2332191-2332611:-|nuORF'] 105965 26981 SSSSSSGT True H1975_Epitope_Rep2 698.2718772983001 698.27132496793 111.33 1 -2.5613192014836565 0.4693644405315893 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 820 9689 ACGRSAAH True H1975_Epitope_Rep2 771.3446058294301 771.3440549679301 42.25 1 -2.5613194377959956 0.4693644405315893 1.0 ['ENST00000590735.1_1_17:40066500-40075203:-|nuORF', 'ENST00000353196.5_1_17:40070148-40075245:-|nuORF', 'ENST00000393896.6_1_17:40068785-40075203:-|nuORF'] 114736 22552 TQKAATGP True PC9_epitope_Rep1 772.40791727864 772.4073649679301 91.551 1 -2.5622158826270325 0.4693663669328638 1.0 ['nc|ENSG00000128872|Q9NZR1-2|TMOD2', 'ENSG00000128872|ENST00000249700|TMOD2'] 76948 24084 NRDSPGYP True H1975_Epitope_Rep1 904.4038945273599 904.40278993586 99.918 2 -2.5622214846906637 0.4693663669328638 1.0 ['ENSG00000196628|ENST00000354452|TCF4', 'nc|ENSG00000196628|P15884|TCF4', 'nc|ENSG00000196628|P15884-4|TCF4', 'nc|ENSG00000196628|P15884-5|TCF4', 'nc|ENSG00000196628|P15884-11|TCF4', 'nc|ENSG00000196628|P15884-12|TCF4', 'nc|ENSG00000196628|P15884-13|TCF4', 'nc|ENSG00000196628|P15884-14|TCF4', 'nc|ENSG00000196628|P15884-10|TCF4', 'nc|ENSG00000196628|P15884-7|TCF4', 'nc|ENSG00000196628|P15884-15|TCF4', 'nc|ENSG00000196628|P15884-9|TCF4', 'nc|ENSG00000196628|P15884-2|TCF4', 'TCF4|p.Q491Gfs*21|1|0.11|ENSG00000196628|chr18:55234563-55234564|GG/-|frameshift_variant', 'nc|ENSG00000196628|P15884-6|TCF4', 'nc|ENSG00000196628|P15884-8|TCF4', 'ENST00000563760.5_1_18:52921909-52988969:-|nuORF', 'ENST00000562680.5_1_18:52899738-53018213:-|nuORF', 'ENST00000563686.5_1_18:52937038-53128316:-|nuORF', 'TCF4|p.Y194C|1|0.19|ENSG00000196628|chr18:55279625-55279625|T/C|missense_variant'] 87953 22010 QRLLFVVF True NCI_RA007_Epitope_Rep4 1020.6120368187999 1020.61092993586 95.454 2 -2.5622389684692655 0.4693663669328638 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 43144 6154 IFDMKKWDQFY True PC9_epitope_Rep5 1519.71697246315 1519.7153249037901 28.656 3 -2.5625140308579946 0.4693663669328638 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7', 'nc|ENSG00000156096|P06133-3|UGT2B4', 'nc|ENSG00000156096|P06133-2|UGT2B4', 'ENSG00000156096|ENST00000305107|UGT2B4'] 61623 25610 LKMRGIIKV True NCI_RA007_Epitope_Rep1 1056.68415621324 1056.68304993586 105.99 2 -2.5626620759329 0.4693663669328638 1.0 ['ENST00000314759.5_1_13:21736000-21742172:-|nuORF'] 86105 7611 QHVFEYLP True PC9_epitope_Rep6 1031.50763131991 1031.50652993586 38.561 2 -2.563262007371261 0.4693663669328638 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.N4503Tfs*25|1|0.14|ENSG00000179869|chr7:48508031-48508031|A/-|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13', 'ENST00000484268.1_1_7:48352666-48443694:+|nuORF'] 109978 24910 TEIFIFLV True PC9_epitope_Rep3 980.5582699104399 980.55716993586 101.19 2 -2.564156459056394 0.4693928882088473 1.0 ['ENST00000246024.6_1_20:7960815-7961187:-|nuORF'] 110793 16949 TGISVRKR True NCI_RA007_Epitope_Rep4 915.5613982282699 915.56030993586 73.451 2 -2.566816096406362 0.46946688883998283 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 27165 13078 FLLEKLRS True NCI_RA007_Epitope_Rep3 1004.60186605792 1004.60076993586 58.723 2 -2.566935752976243 0.46946688883998283 1.0 ['ENST00000564098.5_1_16:1795776-1795875:+|nuORF'] 93543 4012 RQLFWAEP True NCI_RA007_Epitope_Rep1 1045.5345147740898 1045.5334099358602 19.651 2 -2.567248798716519 0.4694724487015573 1.0 ['ENST00000392563.5_1_17:73314377-73314581:-|nuORF'] 95484 23792 RWMKILGK True PC9_epitope_Rep1 1030.6109912729796 1030.60988993586 96.314 2 -2.5674046444415217 0.46948848810035315 1.0 ['ENST00000298281.8_1_11:82872486-82874784:+|nuORF'] 49499 19683 KFGASRAA True H1975_Epitope_Rep2 806.43988611326 806.43878993586 81.673 2 -2.5678791891819506 0.4694940476190476 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 52891 17391 KPGERKKT True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 73.675 2 -2.5687701157505223 0.4695156456311697 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 71115 25002 LYLLVRKH True PC9_epitope_Rep3 1040.64948495668 1040.6483899358602 101.52 2 -2.568838902921038 0.4695156456311697 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 77272 16535 NSCHQSET True NCI_RA007_Epitope_Rep5 904.3344946382001 904.3333899358599 70.362 2 -2.569886755490026 0.4695267636333152 1.0 ['ENST00000305557.9_1_2:74666917-74667613:-|nuORF'] 86977 17288 QLWWRNWFWVH True PC9_epitope_Rep1 1656.8102361147198 1656.80912993586 71.315 2 -2.570449000786674 0.4695267636333152 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 82102 19205 PMSFLPPH True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 80.739 2 -2.5707214937028997 0.46952740228439693 1.0 ['FAM120A|p.H338L|1|0.22|ENSG00000048828|chr9:93498869-93498869|A/T|missense_variant'] 38699 22606 HGDTALHA True H1975_Epitope_Rep1 820.3827651599601 820.38166993586 94.021 2 -2.571050526748087 0.46952740228439693 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 26785 8783 FKRFWWRHYQD True NCI_RA007_Epitope_Rep1 1667.8109643907098 1667.80930490379 38.165 3 -2.5717733833137255 0.46952804090870986 1.0 ['ENST00000354179.8_2_5:176671236-176673694:+|nuORF'] 52592 22668 KLKKNKKNSH True PC9_epitope_Rep4 1223.74623887583 1223.7451499358601 95.421 2 -2.571955522218075 0.46952804090870986 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 136926 20992 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 87.755 2 -2.5726168337917064 0.4695348764106164 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 48494 15765 KAGRAGHK True H1975_Epitope_Rep2 823.47766860431 823.47656993586 65.818 2 -2.5732995186655105 0.4695348764106164 1.0 ['ENSG00000105671|ENST00000247003|DDX49'] 113387 22560 TLSARATA True PC9_epitope_Rep1 789.43446637965 789.43336993586 91.581 2 -2.5734499583193498 0.4695348764106164 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 30863 18899 GAPPAHAP True PC9_epitope_Rep6 716.3605731634 716.36002496793 85.341 1 -2.5735572285938155 0.4695348764106164 1.0 ['ENSG00000196976|ENST00000357360|LAGE3'] 13429 18539 DMKKAITY True NCI_RA007_Epitope_Rep5 968.50010341132 968.49900993586 78.137 2 -2.5737151702812904 0.4695348764106164 1.0 ['ENSG00000164219|ENST00000419445|PGGT1B', 'ENST00000296642.4_1_5:114552647-114588833:-|nuORF', 'nc|ENSG00000164219|P53609-2|PGGT1B'] 134534 22259 VYREKAKK True NCI_RA007_Epitope_Rep3 1020.6080140675198 1020.60690993586 96.728 2 -2.5744396603698934 0.46953742993346953 1.0 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'NAE1|p.D353G|1|0.34|ENSG00000159593|chr16:66810749-66810749|T/C|missense_variant'] 49797 22075 KHIARLSQKQ True PC9_epitope_Rep6 1207.71493874755 1207.71328490379 97.847 3 -2.5752111391481676 0.46953742993346953 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 52409 18276 KKREETEY True NCI_RA007_Epitope_Rep5 1081.5403880001697 1081.53928993586 77.103 2 -2.57570004954468 0.46953742993346953 1.0 ['ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 133514 9049 VWLLQRRRYEE True NCI_RA007_Epitope_Rep2 1546.8368447853802 1546.8357499358601 39.799 2 -2.575871939549492 0.46953742993346953 1.0 ['ENST00000370641.3_1_1:84967597-84971964:-|nuORF'] 124440 23886 VGVGPLLY True NCI_RA007_Epitope_Rep5 816.4745402864799 816.47344993586 99.245 2 -2.5759550525380064 0.46953742993346953 1.0 ['ENSG00000175463|ENST00000542590|TBC1D10C', 'ENST00000526474.1_1_11:67174309-67174885:+|nuORF', 'ENST00000529635.5_1_11:67174176-67177222:+|nuORF'] 52590 19575 KLKKNKKNSH True NCI_RA007_Epitope_Rep5 1223.74623887583 1223.7451499358601 82.19 2 -2.576206450136872 0.46953742993346953 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 52591 23384 KLKKNKKNSH True PC9_epitope_Rep2 1223.74623887583 1223.7451499358601 95.42 2 -2.5762668426186863 0.46953742993346953 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 119601 17102 VATVADTDDH True PC9_epitope_Rep2 1042.45671794586 1042.45562993586 71.032 2 -2.5764513849815556 0.46953742993346953 1.0 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 105967 26593 SSSSSSGT True H1975_Epitope_Rep3 698.2718772983001 698.27132496793 111.04 1 -2.57672297936035 0.4695429876579427 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 142791 21056 YYRQGCAS True PC9_epitope_Rep3 946.3967009719398 946.39560993586 86.273 2 -2.577226784169015 0.4695485452659591 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 105825 17832 SSLKRKQP True H1975_Epitope_Rep2 942.5610638750998 942.55996993586 73.912 2 -2.577512932709596 0.4695541027575224 1.0 ['nc|ENSG00000186575|P35240-2|NF2', 'nc|ENSG00000186575|P35240-4|NF2', 'NF2|p.E522Rfs*20|1|0.22|ENSG00000186575|chr22:29678311-29678312|-/A|frameshift_variant', 'nc|ENSG00000186575|P35240-6|NF2', 'nc|ENSG00000186575|P35240-5|NF2', 'nc|ENSG00000186575|P35240-8|NF2', 'nc|ENSG00000186575|P35240-3|NF2', 'ENSG00000186575|ENST00000338641|NF2', 'nc|ENSG00000186575|P35240-9|NF2', 'NF2|p.S138Lfs*36|1|0.06|ENSG00000186575|chr22:29642249-29642249|T/-|frameshift_variant', 'nc|ENSG00000186575|P35240-10|NF2', 'nc|ENSG00000186575|P35240-7|NF2'] 53021 25243 KPKLLPLLMLW True PC9_epitope_Rep2 1350.8461361578998 1350.84502993586 102.77 2 -2.578513499691962 0.469560297953924 1.0 ['ENST00000473989.7_2_7:138968337-138968418:+|nuORF'] 32687 14454 GGSHMGGG True NCI_RA007_Epitope_Rep2 658.2493084622599 658.24875496793 60.885 1 -2.578628398514375 0.469560297953924 1.0 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 71610 10826 MDKDGYFWFVA True PC9_epitope_Rep6 1377.60635938501 1377.6052699358602 52.494 2 -2.5788230530086964 0.469560297953924 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 9959 11264 AYNHRTDL True PC9_epitope_Rep2 988.47264279352 988.47154993586 48.654 2 -2.5798434507843666 0.469566492760911 1.0 ['nc|ENSG00000158859|O75173-2|ADAMTS4', 'ENSG00000158859|ENST00000367996|ADAMTS4'] 63130 26516 LLRGPHKPR True PC9_epitope_Rep3 1072.6617809758798 1072.66068993586 108.43 2 -2.5801831034434843 0.469566492760911 1.0 ['ENSG00000118156|ENST00000391901|ZNF541'] 40909 25215 HSPPSTLV True PC9_epitope_Rep1 836.4392174069201 836.43812993586 101.87 2 -2.580254074191953 0.469566492760911 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 49570 25207 KFRARSLK True PC9_epitope_Rep2 1004.6243328379999 1004.62322993586 102.63 2 -2.5809584612087404 0.4695825257974962 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant'] 137532 11600 YEEHLQAKK True PC9_epitope_Rep2 1144.58767254576 1144.58656993586 49.945 2 -2.5810895427878884 0.46959855849815624 1.0 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF'] 84845 10513 QEALPEAPA True H1975_Epitope_Rep1 924.4552613938798 924.45416993586 45.39 2 -2.5819970944932744 0.4695991954576882 1.0 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 113322 8970 TLRLFPVLPGN True NCI_RA007_Epitope_Rep2 1225.7182927924898 1225.71718993586 39.509 2 -2.582470291751247 0.4695991954576882 1.0 ['nc|ENSG00000186684|Q4G0S4-1|CYP27C1', 'ENSG00000186684|ENST00000664447|CYP27C1', 'nc|ENSG00000186684|Q4G0S4|CYP27C1'] 89815 24609 RALQPVRKKFS True NCI_RA007_Epitope_Rep5 1328.80408810512 1328.80298993586 102.13 2 -2.5831811581302393 0.46960475177825034 1.0 ['nc|ENSG814|P63133|ERVK-8_pol'] 66375 18739 LSGHDPKR True PC9_epitope_Rep6 908.4828135544 908.48170993586 84.72 2 -2.583388806083971 0.4696072988571967 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|2.3521432925693837|0.4463608682754711|2.4|536.0|137|3|sense'] 110763 23835 TGHPGVIP True NCI_RA007_Epitope_Rep1 776.41808803952 776.41753496793 98.563 1 -2.583519078194801 0.4696072988571967 1.0 ['ENSG00000119782|ENST00000380986|FKBP1B'] 20673 24351 EQCNTELI True H1975_Epitope_Rep3 948.4222470134399 948.42114993586 101.4 2 -2.583617963618465 0.4696072988571967 1.0 ['MYH9|p.G1743C|1|0.23|ENSG00000100345|chr22:36285705-36285705|C/A|missense_variant'] 71479 20034 LYWKWLWAKW True PC9_epitope_Rep2 1478.78631278266 1478.7852099358602 82.464 2 -2.583898711976703 0.4696072988571967 1.0 ['ENST00000377833.8_1_10:17147498-17151673:-|nuORF'] 109334 15832 TCCTCSIS True NCI_RA007_Epitope_Rep5 816.28159676032 816.28048993586 67.62 2 -2.583945512295794 0.4696072988571967 1.0 ['HTR1F|p.L112Sfs*4|1|0.1|ENSG00000179097|chr3:87991079-87991085|CATCTTG/-|frameshift_variant'] 128264 15398 VPPHGGPT True NCI_RA007_Epitope_Rep2 760.38678791124 760.38623496793 64.595 1 -2.585001978980892 0.4696072988571967 1.0 ['HEPH|p.A525G|1|0.3|ENSG00000089472|chrX:66197755-66197755|C/G|missense_variant'] 30589 9669 GAIPIEGA True PC9_epitope_Rep1 726.39120458534 726.39065496793 42.047 1 -2.5851723248895837 0.4696072988571967 1.0 ['ENSG00000134077|ENST00000452837|THUMPD3'] 88417 18211 QSPKVCGY True NCI_RA007_Epitope_Rep5 880.41128840692 880.41018993586 76.857 2 -2.585387718254424 0.4696072988571967 1.0 ['ENSG00000151694|ENST00000310823|ADAM17', 'ADAM17|p.L285Sfs*6|1|0.24|ENSG00000151694|chr2:9521304-9521307|TGAG/-|frameshift_variant', 'nc|ENSG00000151694|P78536-2|ADAM17', 'ENST00000478059.1_1_2:9667906-9695734:-|nuORF'] 98702 24272 SGGAGGGG True H1975_Epitope_Rep3 518.2084891961 518.2079449679301 101.1 1 -2.586186920534291 0.4696085722365954 1.0 ['ENSG00000167487|ENST00000300976|KLHL26'] 53274 25042 KQKIQNNKNH True PC9_epitope_Rep6 1250.68436689526 1250.6832699358602 111.33 2 -2.586635811292589 0.4696085722365954 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 87951 21789 QRLLFVVF True NCI_RA007_Epitope_Rep3 1020.6120368187999 1020.61092993586 94.665 2 -2.586809063817533 0.4696085722365954 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 28717 24325 FSRRKKKGS True PC9_epitope_Rep2 1092.6516102149997 1092.65050993586 99.106 2 -2.5870299760863267 0.4696085722365954 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'ENST00000343889.8_1_1:2411150-2434522:+|nuORF'] 10564 24846 CMDTYVLG True H1975_Epitope_Rep1 900.3721260168799 900.37102993586 102.89 2 -2.587278321659549 0.46962460197754313 1.0 ['ENSG00000169484|ENST00000641793|OR4K14'] 9787 21105 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 91.505 2 -2.587998616011999 0.4696285902765416 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 98836 24098 SGRPGPRL True PC9_epitope_Rep2 838.47733425114 838.47622993586 98.193 2 -2.588093330662867 0.4696285902765416 1.0 ['ENST00000441869.5_1_11:46402650-46402776:+|nuORF'] 136795 11756 WYYLRYFFFFV True NCI_RA007_Epitope_Rep2 1649.8071077968893 1649.8060099358602 50.326 2 -2.5884245171648548 0.4696285902765416 1.0 ['PLVAP|p.L30F|1|0.42|ENSG00000130300|chr19:17377201-17377201|G/A|missense_variant'] 132632 21397 VVFLIVPM True PC9_epitope_Rep6 916.54559705176 916.54448993586 95.176 2 -2.5886022795348302 0.4696285902765416 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 5672 4981 APAEQFRGSKR True PC9_epitope_Rep2 1245.65781779425 1245.65617490379 24.529 3 -2.589553603580812 0.4696285902765416 1.0 ['ENSG00000111752|ENST00000544916|PHC1'] 133780 8851 VYEWWFRWRLD True NCI_RA007_Epitope_Rep1 1654.8044820279397 1654.8028349037902 38.429 3 -2.5900853833292725 0.4696285902765416 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 70991 13193 LYHPFIAG True PC9_epitope_Rep5 916.4806882960798 916.4801349679301 55.753 1 -2.5910335318374074 0.4696285902765416 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 39280 22858 HIMKYKKK True PC9_epitope_Rep3 1074.6372060208198 1074.63667496793 93.194 1 -2.591307849789729 0.4696285902765416 1.0 ['nc|ENSG00000056736|Q9NRM6-2|IL17RB', 'ENST00000475124.1_1_3:53880615-53891834:+|nuORF', 'ENSG00000056736|ENST00000288167|IL17RB'] 132613 22261 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 91.996 2 -2.5919548594251345 0.4696285902765416 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 10706 20162 CRPRCRRRRRR True PC9_epitope_Rep6 1569.8905862907698 1569.8894899358602 90.226 2 -2.5922344760645184 0.4696285902765416 1.0 ['ENST00000447274.6_1_11:67056466-67056871:+|nuORF'] 53712 23425 KSILSEEDH True H1975_Epitope_Rep2 1056.50875351872 1056.5076499358602 96.57 2 -2.5924911465548615 0.4696285902765416 1.0 ['ENST00000574512.1_1_17:5409229-5421219:-|nuORF'] 128130 24869 VPLLIVLDSY True NCI_RA007_Epitope_Rep1 1130.6587122276999 1130.6576099358601 102.94 2 -2.5930514921444705 0.4696285902765416 1.0 ['ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.K1309Rfs*3|1|0.25|ENSG00000188906|chr12:40305931-40305938|TAAACATA/-|frameshift_variant'] 74647 17176 NGLMFVKL True NCI_RA007_Epitope_Rep5 920.5153595526399 920.5142699358599 72.84 2 -2.593194610391288 0.4696285902765416 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 76728 14917 NQTRFTIPP True PC9_epitope_Rep2 1072.56654317836 1072.5654499358602 62.641 2 -2.593229729588783 0.4696285902765416 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 8341 6635 ATKSDPHSV True PC9_epitope_Rep2 940.4614094034799 940.46030993586 30.931 2 -2.593668715165622 0.4696285902765416 1.0 ['ENST00000325333.9_1_19:56154335-56154581:+|nuORF'] 138849 24846 YKARPFKK True H1975_Epitope_Rep2 1036.6181848283998 1036.6170899358601 102.14 2 -2.5937300635946827 0.4696285902765416 1.0 ['LRP1B|p.C3762F|1|0.2|ENSG00000168702|chr2:140358089-140358089|C/A|missense_variant'] 113553 17280 TLTSKVRR True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58650993586 73.24 2 -2.5939948992286115 0.4696285902765416 1.0 ['ENSG00000222018|ENST00000410005|C21orf140'] 70715 10888 LWRFRYQVWPR True NCI_RA007_Epitope_Rep2 1605.8680853440098 1605.8664449037901 46.957 3 -2.5946126884295677 0.4696285902765416 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 7710 22596 ASNRSCAI True PC9_epitope_Rep6 820.3861362882399 820.38502993586 99.955 2 -2.5948109841158007 0.4696285902765416 1.0 ['ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF'] 82316 15991 PPIMLIGH True NCI_RA007_Epitope_Rep3 876.4891448047999 876.48804993586 70.57 2 -2.595625026416238 0.4696285902765416 1.0 ['PPME1|p.E257Kfs*10|1|0.1|ENSG00000214517|chr11:74239189-74239195|AGGAAGA/-|frameshift_variant', 'ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 12916 19006 DLKKGSRVYR True NCI_RA007_Epitope_Rep3 1220.6989543302398 1220.6978499358602 83.043 2 -2.5958635230045886 0.4696285902765416 1.0 ['ENSG00000177453|ENST00000326035|NIM1K'] 77344 6403 NSEANQWEVA True H1975_Epitope_Rep2 1146.4941660837399 1146.4930699358601 29.553 2 -2.5958859835596697 0.4696285902765416 1.0 ['ENSG00000075420|ENST00000415807|FNDC3B'] 89163 19612 QVRGPLHLR True NCI_RA007_Epitope_Rep5 1074.6410455312998 1074.6399499358602 82.341 2 -2.5961745658244313 0.4696285902765416 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 140513 23772 YRLTAVLGL True H1975_Epitope_Rep2 1004.6018660579198 1004.60076993586 97.943 2 -2.5965736012067744 0.4696285902765416 1.0 ['SLC2A10|p.G483R|1|0.08|ENSG00000197496|chr20:46729388-46729388|G/C|missense_variant'] 95591 9729 RWWFRRLFLIF True NCI_RA007_Epitope_Rep1 1638.9299573245796 1638.9283049037901 41.845 3 -2.5965810923631434 0.4696285902765416 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 23147 11551 EVKQEEVVK True PC9_epitope_Rep2 1086.5920892198599 1086.59098993586 49.757 2 -2.596670085970888 0.4696285902765416 1.0 ['ENSG00000055813|ENST00000407595|CCDC85A'] 125746 15946 VKSLGTGQ True NCI_RA007_Epitope_Rep2 788.4392174069199 788.43812993586 66.743 2 -2.5971368708273035 0.4696285902765416 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 125551 18144 VKKAVPKEDI True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 76.596 3 -2.5976367144554953 0.4696285902765416 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 122032 26758 VFVVDSSH True H1975_Epitope_Rep2 888.43413202648 888.43302993586 110.35 2 -2.597763870887984 0.4696285902765416 1.0 ['nc|ENSG00000113595|P36406-3|TRIM23', 'nc|ENSG00000113595|P36406-2|TRIM23', 'ENSG00000113595|ENST00000231524|TRIM23'] 135732 20190 WLWGPLGA True PC9_epitope_Rep6 898.4701236123798 898.46902993586 90.334 2 -2.5985459489229648 0.46965508575736636 1.0 ['ENST00000342232.4_1_8:75149008-75149230:-|nuORF'] 92039 10164 RKRWHRWQDHH True NCI_RA007_Epitope_Rep1 1640.82974277268 1640.82864993586 43.547 2 -2.6005757414597723 0.4696815806833293 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 142225 21776 YWLANYVW True PC9_epitope_Rep6 1113.52836676449 1113.5272699358602 96.653 2 -2.6008019160369016 0.46968713352320324 1.0 ['ABCA2|p.G2278Efs*5|1|0.81|ENSG00000107331|chr9:137009048-137009048|C/-|frameshift_variant', 'nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 52565 24001 KLHDKTAV True NCI_RA007_Epitope_Rep3 910.52361573722 910.52250993586 103.97 2 -2.601125116370647 0.4696982388541034 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 136331 22901 WTARVVHL True PC9_epitope_Rep6 980.55558457184 980.55448993586 101.2 2 -2.601299619708792 0.4696982388541034 1.0 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 132625 22514 VVFLIVPM True NCI_RA007_Epitope_Rep3 916.54559705176 916.54448993586 97.87 2 -2.601449501960253 0.4696988733928048 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 52589 19922 KLKKNKKNSH True NCI_RA007_Epitope_Rep2 1223.74623887583 1223.7451499358601 82.492 2 -2.601460136192241 0.4696988733928048 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 90312 20012 REEWRQRLERR True PC9_epitope_Rep1 1612.8658534978797 1612.86421490379 81.802 3 -2.6037804235919495 0.46976724706572154 1.0 ['ENSG00000283329|ENST00000637493|FAM240B'] 15379 9432 EAHIRSRHWHE True NCI_RA007_Epitope_Rep2 1456.7072275981602 1456.7061299358602 41.298 2 -2.604439969632636 0.4697727986598262 1.0 ['nc|ENSG00000140836|Q15911-2|ZFHX3', 'ENSG00000140836|ENST00000268489|ZFHX3', 'ZFHX3|p.S2868Gfs*7|1|0.09|ENSG00000140836|chr16:72794049-72794080|GCTTTGGTCAACCCTTCGTTGGGTGCAGAAGA/-|frameshift_variant'] 19527 21735 ELPPSLKIY True PC9_epitope_Rep6 1058.60119735158 1058.60010993586 96.495 2 -2.606051570078482 0.4697956363331798 1.0 ['ENSG00000118492|ENST00000397944|ADGB'] 127746 17384 VPATTPAPI True PC9_epitope_Rep5 865.4909186266099 865.49037496793 71.868 1 -2.60609553559703 0.4697956363331798 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 61621 25359 LKMRGIIKV True NCI_RA007_Epitope_Rep1 1056.68415621324 1056.68304993586 104.92 2 -2.606363596447935 0.4697956363331798 1.0 ['ENST00000314759.5_1_13:21736000-21742172:-|nuORF'] 130821 19379 VTARDPAR True PC9_epitope_Rep6 884.4828135543999 884.48170993586 87.193 2 -2.6064689727606707 0.4697956363331798 1.0 ['ENST00000342963.2_1_7:5459527-5460374:+|nuORF'] 127465 24660 VNKPQWHKP True NCI_RA007_Epitope_Rep5 1132.61416207712 1132.61306993586 102.34 2 -2.60651618446913 0.4697956363331798 1.0 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'nc|ENSG00000109756|Q9Y4G8|RAPGEF2'] 10901 23614 CYYVLFHL True NCI_RA007_Epitope_Rep5 1056.5102741721998 1056.5091699358602 98.152 2 -2.6066472627061077 0.4697956363331798 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'ENST00000467542.5_1_13:20411687-20425669:-|nuORF'] 79486 17727 PAYLDSHS True H1975_Epitope_Rep2 888.3977465177602 888.39664993586 73.509 2 -2.6077641267938314 0.4698221259042893 1.0 ['ENST00000430355.5_1_3:185316235-185316268:+|nuORF'] 104674 9848 SQTQKAKFS True PC9_epitope_Rep2 1023.5349086969098 1023.5343749679301 43.215 1 -2.60810915573713 0.46982275777593985 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 108840 25511 SYWISWVRQM True H1975_Epitope_Rep1 1354.6492272565 1354.6481299358602 105.73 2 -2.6085959147797984 0.46982275777593985 1.0 ['nc|ENSG00000282651|A0A0J9YXX1|IGHV5-10-1'] 126039 23204 VLEDLLVL True PC9_epitope_Rep1 912.55318453 912.55208993586 94.051 2 -2.6093058225110353 0.46982528499795867 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'nc|ENSG00000186191|P59827-2|BPIFB4', 'chr20:33107820-33111414|208|46.7|0.9|5.7|+|0|BPIFB4,BPIFB4|1'] 65079 23672 LQLKKRLRWY True PC9_epitope_Rep5 1402.85612367798 1402.8544649037901 96.033 3 -2.6095846085604872 0.46982528499795867 1.0 ['ENSG00000127804|ENST00000263092|METTL16', 'ENST00000574752.5_1_17:2340122-2367575:-|nuORF'] 89080 18322 QVNHTMEV True NCI_RA007_Epitope_Rep5 956.4385657839199 956.43746993586 77.277 2 -2.610212472608002 0.46982528499795867 1.0 ['ENST00000563209.1_1_16:58545213-58545477:+|nuORF', 'NDRG4|p.L341Q|1|0.77|ENSG00000103034|chr16:58511539-58511539|T/A|missense_variant', 'nc|ENSG00000103034|Q9ULP0-4|NDRG4', 'nc|ENSG00000103034|Q9ULP0-2|NDRG4', 'ENSG00000103034|ENST00000570248|NDRG4', 'nc|ENSG00000103034|Q9ULP0-8|NDRG4', 'nc|ENSG00000103034|Q9ULP0-5|NDRG4', 'nc|ENSG00000103034|Q9ULP0-7|NDRG4', 'nc|ENSG00000103034|Q9ULP0-3|NDRG4', 'nc|ENSG00000103034|Q9ULP0-6|NDRG4'] 36505 23127 GVGPGKKY True PC9_epitope_Rep6 804.4493881678 804.4488349679301 102.06 1 -2.6104852873016964 0.46982528499795867 1.0 ['ENST00000555891.1_1_14:93043680-93052850:+|nuORF', 'ENST00000555908.5_1_14:93042630-93052850:+|nuORF'] 95025 19583 RTRLRNRRY True NCI_RA007_Epitope_Rep5 1289.7541182209297 1289.75302993586 82.219 2 -2.610541017664936 0.46982528499795867 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 53034 24525 KPLKVCLQI True H1975_Epitope_Rep1 1040.64162269492 1040.64052993586 101.64 2 -2.6107896489088422 0.46982528499795867 1.0 ['ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 39427 26577 HKVLKGHH True PC9_epitope_Rep1 954.55116789774 954.55006993586 107.96 2 -2.611171436430454 0.46982528499795867 1.0 ['ENSG00000166415|ENST00000360509|WDR72'] 129275 21576 VQVNGAAT True PC9_epitope_Rep5 758.3922672145 758.39116993586 88.033 2 -2.6114596297818506 0.46982528499795867 1.0 ['ENSG00000107929|ENST00000316157|LARP4B'] 33287 5871 GKKVDTTP True PC9_epitope_Rep2 844.4654321547599 844.46432993586 27.978 2 -2.6118965444817315 0.4698517712084415 1.0 ['ENSG00000125844|ENST00000377813|RRBP1'] 105348 16065 SRQPSLLH True NCI_RA007_Epitope_Rep3 936.5141136826799 936.5130099358599 70.878 2 -2.6121488683277505 0.4698579518690268 1.0 ['nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1'] 126815 26627 VLPSQIQHQ True H1975_Epitope_Rep2 1048.56654317836 1048.5654499358602 109.68 2 -2.612490559742052 0.4698579518690268 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 5881 23918 APGGIRETRRT True PC9_epitope_Rep3 1212.6687168311198 1212.6681749679299 97.286 1 -2.612913572167374 0.4698579518690268 1.0 ['ENSG00000089693|ENST00000203630|MLF2'] 109376 24410 TCSPSGRW True NCI_RA007_Epitope_Rep5 892.38613628824 892.38502993586 101.36 2 -2.614016529598582 0.4698844366285643 1.0 ['PCDHB16|p.A508Tfs*33|1|0.33|ENSG00000272674|chr5:141184081-141184084|GCGG/-|frameshift_variant'] 124077 15449 VGSLPKAI True NCI_RA007_Epitope_Rep5 783.48543932335 783.48489496793 66.123 1 -2.614402388774395 0.46988998565940565 1.0 ['ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 47723 18931 IYDPKLQT True H1975_Epitope_Rep2 976.5229470308801 976.52184993586 78.584 2 -2.6146823168162396 0.46989553457407834 1.0 ['ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-5|ATP7A'] 66628 21376 LSKGGWAP True NCI_RA007_Epitope_Rep2 814.43373810366 814.43264993586 88.452 2 -2.6149341986298946 0.4699115507405663 1.0 ['ENST00000308713.9_3_16:29910520-29910610:-|nuORF'] 39658 14905 HLQAFVLH True NCI_RA007_Epitope_Rep4 963.52903547083 963.52848496793 64.796 1 -2.61577449914389 0.4699221366376423 1.0 ['ENSG00000213927|ENST00000259631|CCL27'] 123772 17415 VGRKKGPN True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50752993586 72.482 2 -2.6162841610374263 0.4699221366376423 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 63965 19444 LNTRCYFLLY True NCI_RA007_Epitope_Rep5 1304.6587293110401 1304.65762993586 81.68 2 -2.616339871991411 0.4699221366376423 1.0 ['ENST00000155674.9_1_22:17618446-17618698:-|nuORF'] 126185 13253 VLFYFSLTF True PC9_epitope_Rep2 1135.59538369515 1135.59373490379 56.253 3 -2.616618258793634 0.4699221366376423 1.0 ['ENST00000336314.8_2_5:154193974-154194505:+|nuORF'] 72432 22715 MKPAIAPK True PC9_epitope_Rep1 854.5047948689399 854.50368993586 92.177 2 -2.6170569255233014 0.4699221366376423 1.0 ['ENSG00000180263|ENST00000343958|FGD6', 'nc|ENSG00000180263|Q6ZV73-2|FGD6', 'FGD6|p.E720Sfs*74|1|0.59|ENSG00000180263|chr12:95209127-95209127|A/-|frameshift_variant'] 111563 17800 TIARLNATK True NCI_RA007_Epitope_Rep4 986.58727862294 986.58618993586 77.068 2 -2.61728443233485 0.4699221366376423 1.0 ['ENSG00000100218|ENST00000216036|RSPH14'] 104211 4991 SQGPPGPL True NCI_RA007_Epitope_Rep5 751.38645355807 751.38534993586 25.902 2 -2.617903516792011 0.4699221366376423 1.0 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D', 'ENST00000509818.5_1_4:119687763-119745832:-|nuORF', 'ENST00000514561.5_1_4:119681750-119745902:-|nuORF'] 49114 23525 KEIPHLVAV True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 96.971 2 -2.6180078705807075 0.4699221366376423 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK'] 135858 25453 WPGKPVPA True PC9_epitope_Rep2 850.4701236123799 850.46902993586 103.59 2 -2.6181711305795896 0.4699221366376423 1.0 ['ENST00000488474.1_1_7:736653-736737:-|nuORF'] 6221 12272 APPLLLFF True NCI_RA007_Epitope_Rep3 916.54222592348 916.54112993586 55.427 2 -2.6184858039204233 0.4699221366376423 1.0 ['ENST00000245479.2_1_17:70117265-70117388:+|nuORF'] 33262 8531 GKIFIERVQG True PC9_epitope_Rep4 1145.6556925359298 1145.65458993586 40.292 2 -2.618848102787036 0.4699221366376423 1.0 ['IGSF3|p.K1161Rfs*33|1|0.26|ENSG00000143061|chr1:116577417-116577417|C/-|frameshift_variant', 'ENSG00000143061|ENST00000369486|IGSF3', 'nc|ENSG00000143061|O75054-2|IGSF3'] 132621 19284 VVFLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 80.849 2 -2.619048329352062 0.4699221366376423 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 82500 25530 PPRGPKAT True PC9_epitope_Rep2 822.47118624154 822.47008993586 103.88 2 -2.6190761885258755 0.4699221366376423 1.0 ['ENST00000218104.5_1_X:152990328-152990616:+|nuORF'] 111835 24538 TILRTWPPW True NCI_RA007_Epitope_Rep5 1168.6393141958 1168.63820993586 101.86 2 -2.619291779317657 0.4699221366376423 1.0 ['ENST00000588422.3_1_19:39109887-39111017:+|nuORF'] 66629 24527 LSKGGWAP True PC9_epitope_Rep3 814.43373810366 814.43264993586 99.687 2 -2.6193871989107604 0.4699221366376423 1.0 ['ENST00000308713.9_3_16:29910520-29910610:-|nuORF'] 116379 16480 TTGNKVLG True NCI_RA007_Epitope_Rep4 788.43921740692 788.43812993586 71.44 2 -2.6195207687269133 0.4699221366376423 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 92046 22763 RKSKLGNRHR True PC9_epitope_Rep4 1250.7432191840599 1250.74212993586 95.775 2 -2.619537310849958 0.4699221366376423 1.0 ['ENSG00000050030|ENST00000055682|NEXMIF'] 81189 24630 PKGNGLIP True NCI_RA007_Epitope_Rep4 794.46503823194 794.46394993586 106.98 2 -2.619662783430672 0.4699227661845658 1.0 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 43156 11230 IFEELSGAE True PC9_epitope_Rep5 993.4654917244098 993.46438993586 48.186 2 -2.6197126632840164 0.4699227661845658 1.0 ['ENSG00000175215|ENST00000398073|CTDSP2'] 128474 10113 VPSKSRESV True PC9_epitope_Rep2 987.53490869691 987.53380993586 44.236 2 -2.6208303003126083 0.4699387787138297 1.0 ['ENSG00000128052|ENST00000263923|KDR'] 10516 22171 CLAAGRQI True H1975_Epitope_Rep3 830.4432572415401 830.44214993586 92.718 2 -2.6208629862623964 0.46994432584034496 1.0 ['ABCB1|p.L545Wfs*40|1|0.34|ENSG00000085563|chr7:87549440-87549440|G/-|frameshift_variant', 'ABCB1|p.H145N|1|0.14|ENSG00000085563|chr7:87566882-87566882|G/T|missense_variant', 'ENSG00000085563|ENST00000622132|ABCB1'] 132610 18773 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 77.942 2 -2.621373661487982 0.4699658845936499 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 528 13910 AAPLGRHP True PC9_epitope_Rep4 817.4558705305701 817.45476993586 61.408 2 -2.622605911264271 0.4699658845936499 1.0 ['ENST00000373045.10_1_1:38259693-38260377:+|nuORF'] 126158 20240 VLFGPPGI True H1975_Epitope_Rep2 798.4639756027799 798.46286993586 83.877 2 -2.6230872678281876 0.469978234481604 1.0 ['ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 52382 18932 KKLPMFLG True H1975_Epitope_Rep2 932.5517450613598 932.55064993586 78.588 2 -2.6231664533778267 0.469978234481604 1.0 ['ENST00000274140.9_1_5:10436866-10436944:+|nuORF'] 81397 8276 PLDYTSQRFYM True NCI_RA007_Epitope_Rep2 1419.6492868261498 1419.64818993586 36.829 2 -2.6237633755165115 0.469978234481604 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2'] 135932 3845 WPWEFWENFYF True NCI_RA007_Epitope_Rep2 1649.6979512707296 1649.6968499358602 19.59 2 -2.62457525647976 0.469978234481604 1.0 ['ENST00000493196.1_1_21:30378203-30378365:-|nuORF'] 93639 1386 RQQRTQAHL True PC9_epitope_Rep3 1136.6162873354397 1136.6151899358601 7.6405 2 -2.624624618948527 0.469978234481604 1.0 ['ENSG00000188959|ENST00000400613|C9orf152'] 92272 21121 RLLAGFCK True H1975_Epitope_Rep1 906.51094287854 906.50984993586 87.737 2 -2.6253879128947113 0.469978234481604 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3'] 81417 24319 PLEIVFGM True PC9_epitope_Rep4 904.47282603432 904.47172993586 102.02 2 -2.6260083765118245 0.46998378067284047 1.0 ['ENSG00000107371|ENST00000327304|EXOSC3'] 10651 22907 CPPAPGCL True PC9_epitope_Rep3 756.32986728208 756.32931496793 93.378 1 -2.6263574806928913 0.4699893267480066 1.0 ['ENST00000593685.5_2_19:40316427-40316523:-|nuORF'] 11700 15165 DGYLALWN True PC9_epitope_Rep5 950.44978209062 950.44868993586 63.339 2 -2.626451685895367 0.469994872707106 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1'] 127925 9475 VPGVIRYK True NCI_RA007_Epitope_Rep2 930.5650866263801 930.56398993586 41.468 2 -2.626603535442813 0.4700004185501423 1.0 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'ENST00000438989.1_1_2:20440380-20440515:-|nuORF'] 9779 17470 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 76.647 2 -2.6272230008472857 0.47001705538290905 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 18297 13937 EIRSEKEHPTT True H1975_Epitope_Rep1 1325.6575430107298 1325.65644993586 58.763 2 -2.627246098407846 0.47001705538290905 1.0 ['ANK2|p.G3821Efs*27|1|0.08|ENSG00000145362|chr4:113369654-113369654|G/-|frameshift_variant', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.T2963Pfs*10|1|0.12|ENSG00000145362|chr4:113357505-113357505|A/-|frameshift_variant'] 26772 10296 FKKLYFYS True NCI_RA007_Epitope_Rep2 1094.5800679841798 1094.5789699358602 44.638 2 -2.6274032908153395 0.47001705538290905 1.0 ['nc|ENSG00000283128|Q3B7I2|CNPY1', 'ENSG00000146910|ENST00000636446|CNPY1'] 52893 22387 KPGERKKT True PC9_epitope_Rep2 942.5610638750999 942.55996993586 91.607 2 -2.6278522892997476 0.47002260076172936 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 70714 10391 LWREQFYRYYQ True NCI_RA007_Epitope_Rep1 1650.7943112670598 1650.7932099358602 44.401 2 -2.6289199016814986 0.4700595356429117 1.0 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 136419 21120 WVAHALYK True H1975_Epitope_Rep2 986.5337864980999 986.53268993586 87.415 2 -2.629547788243716 0.4700755435578714 1.0 ['BNC2|p.D147Y|1|0.44|ENSG00000173068|chr9:16552760-16552760|C/A|missense_variant'] 52889 17271 KPGERKKT True NCI_RA007_Epitope_Rep4 942.5610638750999 942.55996993586 74.788 2 -2.6306622698137074 0.4701334030865812 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 82416 23132 PPPAPPKL True NCI_RA007_Epitope_Rep4 815.49052470379 815.48942993586 100.42 2 -2.631379117008597 0.4701340280611444 1.0 ['ENSG00000197483|ENST00000598519|ZNF628'] 52903 20622 KPGERKKT True PC9_epitope_Rep6 942.5610638750999 942.55996993586 92.055 2 -2.631511984748201 0.4701340280611444 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 69596 12937 LVDMAKKL True NCI_RA007_Epitope_Rep4 916.54157430048 916.54046993586 56.852 2 -2.6325127919169393 0.4701451155588571 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 139464 24550 YLQPWAII True NCI_RA007_Epitope_Rep1 1002.5538532363399 1002.55274993586 101.7 2 -2.63252705376204 0.4701451155588571 1.0 ['ENSG00000261272|ENST00000561890|MUC22'] 101220 26214 SLHHHCDC True NCI_RA007_Epitope_Rep2 950.3487052337 950.3481549679301 111.34 1 -2.6336033567064403 0.47015065913370996 1.0 ['ENST00000379540.7_1_9:33370017-33370257:+|nuORF'] 103915 18184 SQALEKLGRL True NCI_RA007_Epitope_Rep4 1113.65060715549 1113.6495099358601 78.693 2 -2.634206746203438 0.47015128371450693 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF', 'ENST00000486253.1_1_15:91479504-91483847:+|nuORF', 'ENST00000553671.6_1_15:91478554-91486156:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 81042 25218 PIPHLVLT True H1975_Epitope_Rep2 888.54328855264 888.54274496793 103.6 1 -2.634747650700449 0.47015128371450693 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 123494 20698 VGPGLANN True PC9_epitope_Rep3 740.3817025308001 740.38115496793 84.889 1 -2.6350076127100266 0.4701568270508354 1.0 ['nc|ENSG00000182871|P39060|COL18A1'] 69598 18203 LVDMAKKL True NCI_RA007_Epitope_Rep4 916.54157430048 916.54046993586 78.771 2 -2.6362204648789644 0.4701728322731838 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 134122 5502 VYLCQSENSCL True PC9_epitope_Rep1 1257.53695949585 1257.53586993586 25.993 2 -2.636778115132184 0.47019929905319874 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.A2076Qfs*25|1|0.13|ENSG00000158683|chr7:47833201-47833201|C/-|frameshift_variant'] 123765 8601 VGRIQFAV True NCI_RA007_Epitope_Rep3 888.5181364339599 888.51702993586 40.908 2 -2.638236462958282 0.4702190422393774 1.0 ['ZAN|p.E2695Rfs*83|1|0.75|ENSG00000146839|chr7:100794212-100794212|G/-|frameshift_variant', 'ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.A2019Pfs*35|1|0.1|ENSG00000146839|chr7:100775692-100775692|C/-|frameshift_variant', 'ZAN|p.Q2488Rfs*12|1|0.3|ENSG00000146839|chr7:100791044-100791044|C/-|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 39833 8045 HNQISLCPL True PC9_epitope_Rep1 1023.51715045779 1023.51604993586 35.768 2 -2.6382509901861533 0.4702190422393774 1.0 ['ENSG00000174004|ENST00000328557|NRROS'] 69606 24167 LVDMAKKL True PC9_epitope_Rep2 916.54157430048 916.54046993586 98.485 2 -2.638519301122729 0.4702190422393774 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 91974 23811 RKQCQRVL True PC9_epitope_Rep2 1029.5865674302897 1029.5854699358601 97.059 2 -2.6396073715341455 0.4702190422393774 1.0 ['ENST00000379933.7_1_6:7176934-7182129:+|nuORF', 'ENST00000467782.5_3_6:7176934-7182121:+|nuORF', 'ENST00000491191.5_3_6:7176934-7181518:+|nuORF'] 91810 22101 RKIHDAAG True PC9_epitope_Rep6 866.4722488706998 866.47114993586 97.953 2 -2.6400145342700916 0.4702190422393774 1.0 ['nc|ENSG00000113108|O95704-3|APBB3', 'nc|ENSG00000113108|O95704-2|APBB3', 'ENSG00000113108|ENST00000357560|APBB3', 'nc|ENSG00000113108|O95704-4|APBB3', 'ENST00000506165.1_1_5:139943324-139943944:-|nuORF', 'nc|ENSG00000113108|O95704-5|APBB3', 'nc|ENSG00000113108|O95704-6|APBB3'] 52901 22475 KPGERKKT True PC9_epitope_Rep5 942.5610638750999 942.55996993586 91.453 2 -2.64011145336433 0.4702190422393774 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 36246 7339 GVDPGPKQ True NCI_RA007_Epitope_Rep4 796.4079172786401 796.4073649679301 34.867 1 -2.6401357956029483 0.4702190422393774 1.0 ['ENST00000540992.1_1_12:16666501-16667302:+|nuORF'] 72744 23436 MNLLPKSS True PC9_epitope_Rep3 888.4738886634801 888.47278993586 95.424 2 -2.6406586400405643 0.4702190422393774 1.0 ['nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13', 'nc|ENSG00000010165|Q8N6R0-1|METTL13'] 99296 26517 SHRQDYLV True NCI_RA007_Epitope_Rep5 1016.5039429217999 1016.50284993586 109.62 2 -2.6409378419472875 0.4702190422393774 1.0 ['ENSG00000182793|ENST00000370989|GSTA5'] 75290 24606 NIIQKHAQANG True NCI_RA007_Epitope_Rep1 1192.63126869324 1192.63016993586 101.91 2 -2.6410016112241594 0.4702190422393774 1.0 ['ENSG00000164024|ENST00000296411|METAP1'] 92423 16691 RLRELCRRWLR True NCI_RA007_Epitope_Rep2 1555.8994025556299 1555.8983099358602 69.657 2 -2.641465815667823 0.4702190422393774 1.0 ['ENSG00000160908|ENST00000337673|ZNF394', 'ENST00000481881.1_1_7:99096270-99097704:-|nuORF', 'nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2', 'nc|ENSG00000176371|Q7Z7L9-3|ZSCAN2', 'nc|ENSG00000160908|Q53GI3-3|ZNF394', 'ENSG00000176371|ENST00000546148|ZSCAN2', 'ENSG00000186448|ENST00000344387|ZNF197', 'nc|ENSG00000186448|O14709-2|ZNF197'] 69592 16600 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 73.079 2 -2.64152294045846 0.4702190422393774 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 122033 26911 VFVVDSSH True H1975_Epitope_Rep2 888.43413202648 888.43302993586 111.03 2 -2.641689396378728 0.4702190422393774 1.0 ['nc|ENSG00000113595|P36406-3|TRIM23', 'nc|ENSG00000113595|P36406-2|TRIM23', 'ENSG00000113595|ENST00000231524|TRIM23'] 92433 23845 RLRLRKERVSD True PC9_epitope_Rep2 1426.84807817542 1426.84642490379 97.189 3 -2.642251148439946 0.4702350442996266 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 95231 25125 RVLLNVIH True PC9_epitope_Rep1 962.6025347642601 962.60142993586 101.53 2 -2.643662524722542 0.47023566699093106 1.0 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4', 'MAP3K4|p.G1039Pfs*16|1|0.05|ENSG00000085511|chr6:161091519-161091520|-/CCACTTGGTAAAGGAATTACCAAATATA|frameshift_variant'] 72855 14059 MPPPGVVK True PC9_epitope_Rep3 823.46259570379 823.46148993586 59.167 2 -2.6440639555020597 0.47023566699093106 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 34201 22476 GNINAVHLK True PC9_epitope_Rep5 964.54541381096 964.54430993586 91.457 2 -2.6449424099210135 0.4702516683751386 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 91706 23987 RKAPLHSP True PC9_epitope_Rep1 904.52428444356 904.52318993586 97.072 2 -2.646946126625482 0.47029904919301696 1.0 ['nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 72099 20559 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 86.02 2 -2.6476976338528484 0.4702996705193243 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 114211 2822 TPLSAAAHTH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 15.754 2 -2.647814966119875 0.4702996705193243 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 53065 22934 KPPKGWFR True PC9_epitope_Rep4 1014.5763200164199 1014.57522993586 96.436 2 -2.648557259018351 0.47034704934836724 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF', 'ENST00000551051.5_1_12:113546023-113565713:-|nuORF', 'ENST00000548972.5_1_12:113545343-113573291:-|nuORF', 'ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1'] 49571 24467 KFRARSLK True PC9_epitope_Rep4 1004.6243328379999 1004.62322993586 102.6 2 -2.6509829340256243 0.4703655284212728 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant'] 41003 22457 HTFRGPHW True PC9_epitope_Rep6 1036.4991323248798 1036.4980299358601 99.376 2 -2.651427620165717 0.4703655284212728 1.0 ['ENST00000485882.1_1_2:175676980-175711685:-|nuORF', 'nc|ENSG00000106069|P52757-6|CHN2', 'nc|ENSG00000106069|P52757-5|CHN2', 'nc|ENSG00000106069|P52757-7|CHN2', 'nc|ENSG00000106069|P52757-4|CHN2', 'nc|ENSG00000106069|P52757-8|CHN2', 'nc|ENSG00000106069|P52757-3|CHN2', 'nc|ENSG00000128656|P15882-2|CHN1', 'nc|ENSG00000128656|P15882-3|CHN1', 'ENSG00000128656|ENST00000409900|CHN1', 'ENSG00000106069|ENST00000222792|CHN2', 'nc|ENSG00000106069|P52757-9|CHN2'] 11503 3173 DFINMRAWFH True NCI_RA007_Epitope_Rep1 1335.6182614813897 1335.6171699358601 16.233 2 -2.651794702290635 0.4703655284212728 1.0 ['ENST00000358701.9_2_9:139100252-139100573:-|nuORF'] 123393 14130 VGMPGSGP True PC9_epitope_Rep2 700.32141077336 700.3208649679301 59.622 1 -2.6518965560099916 0.4703655284212728 1.0 ['nc|ENSG00000101811|P33240-2|CSTF2', 'ENSG00000101811|ENST00000372972|CSTF2'] 84514 15728 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 67.216 2 -2.6526067126122634 0.4703655284212728 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 122810 6994 VGGRAMAH True H1975_Epitope_Rep3 797.39664140229 797.39554993586 31.864 2 -2.6529106989168416 0.4703655284212728 1.0 ['ENST00000452600.1_1_2:130987586-130988813:+|nuORF'] 24910 17828 FCCSKELH True NCI_RA007_Epitope_Rep2 965.4099085079299 965.40880993586 74.087 2 -2.652915916709511 0.4703655284212728 1.0 ['ENST00000380527.2_1_9:19050237-19050378:+|nuORF'] 72853 22447 MPPKKKPQLP True PC9_epitope_Rep4 1162.6896355164997 1162.68852993586 94.574 2 -2.6530021467576534 0.4703655284212728 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-3|XIRP1'] 32479 22182 GGCREVPQ True PC9_epitope_Rep6 844.3861362882399 844.38502993586 98.27 2 -2.6530796372099394 0.4703655284212728 1.0 ['ENSG00000229924|ENST00000512047|FAM90A26', 'nc|ENSG00000205879|Q658T7|FAM90A2P', 'nc|ENSG00000285950|A6NDY2|FAM90A10', 'nc|ENSG00000285937|A6NJQ4|FAM90A8', 'nc|ENSG00000285765|A8MXZ1|FAM90A23', 'nc|ENSG00000285720|P0DV74|FAM90A17', 'nc|ENSG00000285657|P0DV76|FAM90A19', 'nc|ENSG00000254229|A8MX19|FAM90A12', 'nc|ENSG00000233132|A0A8V8TPE2|FAM90A3', 'nc|ENSG00000205879|Q658T7-2|FAM90A2P', 'nc|ENSG00000230045|P0C7V4|FAM90A15', 'nc|ENSG00000223885|P0C7W8|FAM90A13', 'nc|ENSG00000215373|A8MXJ8|FAM90A5', 'nc|ENSG00000215354|P0C7X0|FAM90A24', 'ENSG00000171847|ENST00000538603|FAM90A1', 'nc|ENSG00000285975|A6NKC0|FAM90A7', 'nc|ENSG00000285975|A6NNJ1|FAM90A9', 'nc|ENSG00000233115|A0A8V8TNH8|FAM90A11'] 85668 22387 QGRPFYQW True NCI_RA007_Epitope_Rep5 1080.5141136826799 1080.51300993586 93.276 2 -2.6539765706660914 0.4703661482790717 1.0 ['ENSG00000105538|ENST00000222145|RASIP1', 'ENST00000601530.1_1_19:49224057-49228265:-|nuORF'] 52894 22574 KPGERKKT True PC9_epitope_Rep2 942.5610638750999 942.55996993586 92.329 2 -2.6541091316605616 0.4703661482790717 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 70748 7325 LWWQPWWWWKL True NCI_RA007_Epitope_Rep2 1713.8608747052497 1713.85921490379 33.115 3 -2.6546637336195267 0.4703716873392039 1.0 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 136641 13481 WWRCFPERWFP True PC9_epitope_Rep4 1608.7448589768396 1608.7437699358602 59.752 2 -2.6547879654420203 0.4703772262834792 1.0 ['nc|nan|Q6UWU4-3|C6orf89', 'ENSG00000198663|ENST00000480824|C6orf89', 'nc|nan|Q6UWU4-2|C6orf89'] 92696 2551 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 14.116 3 -2.655789541916687 0.47041045751633986 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 83383 23576 PTHPSLLT True H1975_Epitope_Rep3 864.4705175352 864.46942993586 98.36 2 -2.657174199503693 0.47041045751633986 1.0 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF'] 53312 23392 KQLKKKSEEVY True PC9_epitope_Rep6 1378.78201524786 1378.78090993586 103.08 2 -2.6575629821675926 0.47041045751633986 1.0 ['CCDC18|p.L1097Afs*7|1|0.11|ENSG00000122483|chr1:93254563-93254564|-/GCTTTAAACACTCATAT|frameshift_variant', 'nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18', 'ENST00000421014.2_1_1:93687225-93704878:+|nuORF'] 78889 23419 PAGAQVRL True H1975_Epitope_Rep2 810.47118624154 810.47008993586 96.548 2 -2.657815298266238 0.47041045751633986 1.0 ['ENSG00000163501|ENST00000295731|IHH'] 48702 23954 KCCNHCYL True NCI_RA007_Epitope_Rep5 982.3823138610999 982.3812099358599 99.514 2 -2.6578604504974868 0.47041045751633986 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 10554 7270 CLYALFLF True PC9_epitope_Rep1 988.5092115430399 988.50810993586 32.776 2 -2.6579971510720215 0.47041045751633986 1.0 ['ENSG00000091262|ENST00000205557|ABCC6', 'ENST00000456970.6_1_16:16251574-16267200:-|nuORF'] 28769 4148 FSSSWWTR True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 21.074 2 -2.6583416829424147 0.4704110763696446 1.0 ['ENST00000573520.5_1_16:4521405-4524561:-|nuORF', 'ENST00000571291.5_1_16:4519639-4524561:-|nuORF', 'ENST00000283429.10_1_16:4519403-4524606:-|nuORF', 'ENST00000404295.7_1_16:4519400-4524561:-|nuORF', 'ENST00000574733.5_1_16:4519403-4524387:-|nuORF'] 83744 15826 PVHFGFVP True NCI_RA007_Epitope_Rep3 898.4701236123799 898.46902993586 69.883 2 -2.6584843622332235 0.4704110763696446 1.0 ['ENST00000518120.1_1_5:179314742-179315312:-|nuORF'] 83947 21221 PVRLSSVSS True H1975_Epitope_Rep3 930.51344497634 930.51234993586 88.632 2 -2.659208932923622 0.47042707156899655 1.0 ['nc|ENSG00000170873|O43312-2|MTSS1', 'nc|ENSG00000170873|O43312-4|MTSS1', 'ENSG00000170873|ENST00000518547|MTSS1', 'nc|ENSG00000170873|O43312-5|MTSS1'] 42701 21136 IEKKGGGG True PC9_epitope_Rep2 744.4130026590798 744.4124549679301 86.754 1 -2.6598630408708206 0.47042769005542195 1.0 ['ENSG00000150594|ENST00000280155|ADRA2A'] 132448 17840 VVCVPLLLLP True NCI_RA007_Epitope_Rep4 1064.6667748136 1064.66566993586 77.242 2 -2.660306917352555 0.47042769005542195 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4'] 52904 20803 KPGERKKT True PC9_epitope_Rep6 942.5610638750999 942.55996993586 92.788 2 -2.661382879512007 0.47042892695066607 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 95991 10520 RYLLTPSM True H1975_Epitope_Rep2 979.51608782863 979.51498993586 45.485 2 -2.661839180768396 0.47042892695066607 1.0 ['nc|ENSG00000128789|Q969U7-2|PSMG2', 'ENSG00000128789|ENST00000317615|PSMG2'] 122996 10446 VGIESGGF True NCI_RA007_Epitope_Rep5 764.37046914076 764.36992496793 46.812 1 -2.6621081349503646 0.47042892695066607 1.0 ['ENST00000406687.5_1_2:54013870-54014047:-|nuORF'] 110672 20255 TGAKGKGG True PC9_epitope_Rep5 674.3711378470998 674.3705849679301 82.96 1 -2.6623318621043826 0.47042892695066607 1.0 ['ENST00000524717.5_1_11:96075672-96075822:-|nuORF'] 72827 8848 MPMLLWRLSWK True PC9_epitope_Rep1 1459.7832186315102 1459.78156490379 38.875 3 -2.6634683116197277 0.4704609143000544 1.0 ['ENST00000415368.5_1_2:262747-263276:-|nuORF', 'ENST00000465733.5_1_2:260594-263276:-|nuORF'] 48384 23827 IYTSERFQN True PC9_epitope_Rep2 1156.5512870370399 1156.55018993586 97.121 2 -2.663876136909509 0.4704609143000544 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 135325 16779 WGGRGGLM True NCI_RA007_Epitope_Rep3 832.4013924295599 832.40028993586 73.849 2 -2.6641422609145673 0.47046153202701857 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 119014 6300 VAFAIPAA True NCI_RA007_Epitope_Rep5 758.4326754744999 758.43156993586 30.911 2 -2.6641660378557694 0.47046153202701857 1.0 ['ENST00000501520.1_1_16:28303160-28303361:-|nuORF'] 69605 24020 LVDMAKKL True PC9_epitope_Rep2 916.54157430048 916.54046993586 97.889 2 -2.665509536730198 0.47050889281569236 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 16305 16981 EEGDQAGR True H1975_Epitope_Rep2 860.3624236381999 860.36132993586 70.565 2 -2.6663087884292245 0.47052488498536177 1.0 ['ENSG00000129028|ENST00000249861|THAP10'] 53064 23648 KPPKGWFR True PC9_epitope_Rep2 1014.5763200164199 1014.57522993586 96.432 2 -2.66716984304526 0.4705722441212451 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF', 'ENST00000551051.5_1_12:113546023-113565713:-|nuORF', 'ENST00000548972.5_1_12:113545343-113573291:-|nuORF', 'ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1'] 92338 20882 RLNIAIFF True H1975_Epitope_Rep1 992.58073669052 992.57962993586 86.766 2 -2.668610529860876 0.47059869095167395 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 9783 16496 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 71.512 2 -2.6703114480722707 0.4706251372290706 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 138634 26327 YIFGKFET True H1975_Epitope_Rep1 1003.5014833103099 1003.50097496793 109.4 1 -2.6705356766468156 0.4706411275145331 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.Q3726Vfs*37|1|0.06|ENSG00000039139|chr5:13751112-13751113|TG/-|frameshift_variant', 'DNAH5|p.P3316Lfs*22|1|0.4|ENSG00000039139|chr5:13766130-13766130|G/-|frameshift_variant'] 55022 15485 KYREGKYRRYH True H1975_Epitope_Rep1 1554.81677804714 1554.81568993586 64.835 2 -2.670756466646047 0.47064666213602385 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF'] 3699 9918 AGRPRGGPPV True PC9_epitope_Rep1 962.5409971368598 962.53990993586 43.009 2 -2.671735679585471 0.4706577310318149 1.0 ['ENST00000308893.8_1_16:29985169-29989140:+|nuORF'] 52900 22368 KPGERKKT True PC9_epitope_Rep5 942.5610638750999 942.55996993586 91.05 2 -2.672140802624781 0.4706577310318149 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 52892 23348 KPGERKKT True PC9_epitope_Rep1 942.5610638750999 942.55996993586 94.6 2 -2.6729438277577047 0.4706638787245165 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 133367 19475 VVVGNKAL True PC9_epitope_Rep6 798.49633836022 798.49524993586 87.574 2 -2.673094762900222 0.4706638787245165 1.0 ['ENSG00000101407|ENST00000373447|TTI1'] 30562 23640 GAHDDSDD True PC9_epitope_Rep5 830.2678545470201 830.26730496793 95.911 1 -2.6740179241000726 0.4706638787245165 1.0 ['ENSG00000140623|ENST00000268231|SEPTIN12', 'nc|ENSG00000140623|Q8IYM1-2|SEPTIN12'] 123229 8900 VGLGDSKK True H1975_Epitope_Rep2 802.45486747106 802.45376993586 39.201 2 -2.674789172997517 0.4706798674347367 1.0 ['ENST00000563181.1_1_16:2030938-2031410:-|nuORF', 'ENST00000354249.8_2_16:2030177-2031410:-|nuORF', 'ENST00000356120.8_2_16:2030177-2031410:-|nuORF'] 49500 20281 KFGASRAA True H1975_Epitope_Rep2 806.43988611326 806.43878993586 84.048 2 -2.675292591304377 0.4707063103751098 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 80713 14180 PHAGRYGV True PC9_epitope_Rep2 855.43513508599 855.4340299358599 59.811 2 -2.6767806231786606 0.4707278315595793 1.0 ['ENST00000368171.3_1_1:158150758-158150947:+|nuORF'] 95203 8821 RVKEYFSWLYY True H1975_Epitope_Rep1 1552.77145056416 1552.7703499358602 38.852 2 -2.677115029310761 0.4707278315595793 1.0 ['ENSG00000196542|ENST00000620149|SPTSSB'] 39412 25340 HKRYKIQKKVR True PC9_epitope_Rep5 1482.9259345732999 1482.92482993586 102.67 2 -2.677861326190004 0.47072905559388656 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 122419 12046 VGDSVRVL True PC9_epitope_Rep3 843.48141657207 843.48030993586 51.373 2 -2.6779814994640603 0.47072905559388656 1.0 ['ENST00000599145.1_1_19:58927211-58927334:+|nuORF'] 110805 9795 TGLHTTKDP True PC9_epitope_Rep2 968.4927095317599 968.49160993586 43.015 2 -2.678343101698069 0.47072905559388656 1.0 ['ENST00000379263.7_1_7:102985147-102985279:-|nuORF'] 100063 24629 SIRQICFC True H1975_Epitope_Rep2 968.45719305352 968.45608993586 101.29 2 -2.678528488820124 0.47072905559388656 1.0 ['ENST00000441876.6_1_22:45728453-45732244:+|nuORF'] 89161 18604 QVRGPLHLR True H1975_Epitope_Rep3 1074.6410455312998 1074.6399499358602 78.02 2 -2.6793586063170336 0.4707345884861853 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 122323 8505 VGCMEKEEDER True PC9_epitope_Rep3 1323.5435014282698 1323.5424099358602 37.675 2 -2.680786211182228 0.47077148233326366 1.0 ['ENSG00000128482|ENST00000461366|RNF112', 'nc|ENSG00000128482|Q9ULX5-2|RNF112'] 40910 24911 HSPPSTLV True PC9_epitope_Rep2 836.4392174069201 836.43812993586 101.48 2 -2.6819989747577684 0.47080837540899634 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 53461 22414 KRFVGSLG True NCI_RA007_Epitope_Rep5 862.5024863698198 862.50138993586 93.382 2 -2.6825905130000005 0.4708243607702118 1.0 ['ENSG00000104643|ENST00000221086|MTMR9'] 52897 22497 KPGERKKT True PC9_epitope_Rep3 942.5610638750999 942.55996993586 91.81 2 -2.6830791151255733 0.47084034579722567 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 40803 14944 HRYREQEYRRR True NCI_RA007_Epitope_Rep2 1647.8454524064696 1647.84434993586 62.809 2 -2.684593529613481 0.47084770565485523 1.0 ['ENSG00000138398|ENST00000260970|PPIG'] 93018 10275 RPLAALYA True NCI_RA007_Epitope_Rep2 873.5072373970901 873.50614993586 44.557 2 -2.6847666990363175 0.47084770565485523 1.0 ['ENSG00000149654|ENST00000537909|CDH22'] 65570 19325 LRRYSVDLR True NCI_RA007_Epitope_Rep4 1176.6727395823998 1176.6716499358602 83.574 2 -2.6849936148827007 0.47084770565485523 1.0 ['nc|ENSG00000138030|P50053-2|KHK'] 117396 14322 TVPNDGGP True NCI_RA007_Epitope_Rep3 755.3449826689099 755.34443496793 63.653 1 -2.685661598011633 0.47084770565485523 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'ENST00000548158.1_1_12:50393384-50398020:-|nuORF'] 91927 16968 RKLRVHGR True NCI_RA007_Epitope_Rep3 1020.6417142376399 1020.64060993586 74.607 2 -2.6857006651112174 0.47084770565485523 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 41013 20034 HTGGRGKL True PC9_epitope_Rep6 824.461684187 824.46058993586 89.728 2 -2.6858329396911254 0.47084770565485523 1.0 ['ENST00000597953.1_1_3:142719968-142720172:-|nuORF'] 89165 22701 QVRGPLHLR True PC9_epitope_Rep4 1074.6410455312998 1074.6399499358602 95.549 2 -2.6858856699700397 0.47084770565485523 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 9781 18471 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 80.835 2 -2.687007645728559 0.47085384591263996 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 124511 15193 VGVPPGVV True NCI_RA007_Epitope_Rep5 722.4326754745 722.43212496793 65.124 1 -2.6871388707421446 0.47085384591263996 1.0 ['nc|ENSG00000118514|Q9H2A2-4|ALDH8A1'] 97024 15652 SCKEFADYFA True PC9_epitope_Rep4 1179.4906609264297 1179.4895699358601 68.132 2 -2.687304560990562 0.47085384591263996 1.0 ['ENSG00000156414|ENST00000409874|TDRD9', 'nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'TDRD9|p.G614Pfs*10|1|0.09|ENSG00000156414|chr14:104006514-104006515|-/CCCCTTAA|frameshift_variant'] 49757 18996 KGSGYQAL True NCI_RA007_Epitope_Rep4 822.4235673427798 822.42246993586 82.165 2 -2.687851273958948 0.47086490723804547 1.0 ['ENSG00000172409|ENST00000533682|CLP1', 'nc|ENSG00000172409|Q92989-2|CLP1'] 54077 25371 KVLCYLKRVW True PC9_epitope_Rep5 1306.7583837826598 1306.7572899358602 102.81 2 -2.687873442725799 0.47086490723804547 1.0 ['ENST00000519610.1_1_5:150534867-150534930:-|nuORF'] 131413 6941 VTHTSNGPYKG True PC9_epitope_Rep5 1159.56218607391 1159.56055490379 31.667 3 -2.6886771925229973 0.4708913416112714 1.0 ['ENSG00000277462|ENST00000366503|ZNF670'] 91623 17771 RIPKAGNR True NCI_RA007_Epitope_Rep3 910.5460825173 910.54498993586 77.917 2 -2.688924747715495 0.4708919500825686 1.0 ['nc|ENSG00000163608|Q6NW34-2|NEPRO', 'ENSG00000163608|ENST00000314400|NEPRO', 'ENST00000494575.5_1_3:112730211-112738494:-|nuORF', 'ENST00000486271.5_1_3:112732111-112738494:-|nuORF'] 139378 7183 YLMKYHSM True PC9_epitope_Rep1 1071.48815882863 1071.48706993586 32.44 2 -2.689142507546733 0.4708919500825686 1.0 ['ENSG00000189037|ENST00000339042|DUSP21'] 31113 17082 GAVPKPSKPT True PC9_epitope_Rep2 980.5654805492 980.56438993586 70.957 2 -2.6902736652616097 0.47091346153846153 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 91633 24369 RIPWATPHQ True PC9_epitope_Rep4 1104.58286194884 1104.5817699358602 102.22 2 -2.690346722371562 0.47091346153846153 1.0 ['ENST00000305123.5_1_2:227662067-227662256:-|nuORF'] 95023 18647 RTRLRNRRY True NCI_RA007_Epitope_Rep3 1289.7541182209297 1289.75302993586 81.582 2 -2.6918633073587634 0.47093989402284675 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 71061 23808 LYLATRDQ True H1975_Epitope_Rep3 978.51344497634 978.51234993586 99.285 2 -2.6961903328876993 0.4709976798143852 1.0 ['ENST00000273859.7_1_4:47487394-47514558:+|nuORF'] 10300 18210 CDCPGLVM True NCI_RA007_Epitope_Rep5 836.32306764948 836.32196993586 76.854 2 -2.69688401203726 0.4710345620434142 1.0 ['ENSG00000041802|ENST00000265245|LSG1', 'ENST00000466391.1_1_3:194371468-194371945:-|nuORF'] 192 12890 AAERRRRRRWH True NCI_RA007_Epitope_Rep2 1548.872276291 1548.87064490379 54.76 3 -2.697737687064267 0.4710609924334267 1.0 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 126700 17220 VLPFLCIL True PC9_epitope_Rep2 916.54559705176 916.54448993586 71.496 2 -2.699377495015989 0.4710984773271186 1.0 ['L1PA3_dup1120|chr2:110351377-110353837:-|1.2372248013512652|0.4358200479832063|1.51|529.0|156|3|anti-sense', 'L1PA3_dup1115|chr2:110017555-110020014:+|1.8409101932023448|0.4680770941019235|1.98|537.0|129|2|anti-sense'] 81524 21678 PLHPGLGY True PC9_epitope_Rep6 852.4493881678 852.44828993586 96.269 2 -2.6995574487540672 0.4710984773271186 1.0 ['ENST00000527274.2_1_11:66245031-66245460:-|nuORF'] 35803 5229 GTISHIKS True NCI_RA007_Epitope_Rep1 841.4657665079301 841.46521496793 24.422 1 -2.700030137961616 0.4710984773271186 1.0 ['CUBN|p.T2323Hfs*11|1|0.33|ENSG00000107611|chr10:16918656-16918656|G/-|frameshift_variant', 'CUBN|p.A2835Pfs*18|1|0.16|ENSG00000107611|chr10:16899091-16899091|C/-|frameshift_variant', 'CUBN|p.H3198Tfs*23|1|0.09|ENSG00000107611|chr10:16851307-16851307|A/-|frameshift_variant', 'ENSG00000107611|ENST00000377833|CUBN', 'CUBN|p.S915Ffs*3|1|0.12|ENSG00000107611|chr10:17068652-17068653|-/A|frameshift_variant'] 125410 7452 VISRPGSN True NCI_RA007_Epitope_Rep2 828.44536541652 828.44426993586 33.613 2 -2.7012167438565005 0.47112731984617956 1.0 ['ENSG00000155530|ENST00000285928|LRGUK'] 129588 25333 VRLRRWRHL True PC9_epitope_Rep2 1290.78977545366 1290.78866993586 103.12 2 -2.701260504983777 0.47112731984617956 1.0 ['ENST00000342232.4_1_8:75233190-75233559:-|nuORF'] 40095 26820 HPVMGLIY True H1975_Epitope_Rep2 928.4840594243599 928.48296993586 110.62 2 -2.703164615029984 0.47112731984617956 1.0 ['LRP5|p.M473I|1|0.18|ENSG00000162337|chr11:68389887-68389887|G/T|missense_variant'] 43561 17271 IGRTWKRTR True PC9_epitope_Rep2 1172.68905835288 1172.68796993586 71.692 2 -2.7032303804880686 0.47112731984617956 1.0 ['ENST00000217315.9_1_20:30729570-30730884:+|nuORF'] 11541 11593 DFQQTLFPL True PC9_epitope_Rep4 1107.5600608155898 1107.5589699358602 52.351 2 -2.7032790790457666 0.47112731984617956 1.0 ['ENST00000341049.6_1_7:116199659-116199932:+|nuORF'] 105035 3743 SRDNPFKRTNE True NCI_RA007_Epitope_Rep1 1362.6640253734997 1362.66238490379 18.532 3 -2.7033303648157783 0.47112731984617956 1.0 ['ENSG00000171951|ENST00000305409|SCG2'] 41098 23661 HTSCSSGC True H1975_Epitope_Rep1 780.2530735133599 780.25196993586 98.249 2 -2.7034391395981263 0.47112731984617956 1.0 ['ENSG00000187175|ENST00000391617|KRTAP12-1', 'ENSG00000221864|ENST00000360770|KRTAP12-2'] 80477 15645 PGLKAATP True H1975_Epitope_Rep2 753.43848913093 753.43738993586 65.334 2 -2.7036610254852738 0.47112731984617956 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'TNC|p.G2174Afs*11|1|0.13|ENSG00000041982|chr9:115021242-115021242|C/-|frameshift_variant'] 61929 14834 LLDIACWIH True PC9_epitope_Rep1 1082.55828699378 1082.5577749679298 61.878 1 -2.7046207710981554 0.47112731984617956 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 76427 7193 NQEKSQSL True PC9_epitope_Rep5 932.45632402304 932.45522993586 32.633 2 -2.7057857579025266 0.47114329602808863 1.0 ['ENST00000258341.4_1_1:183112029-183112179:+|nuORF'] 8965 8350 AVGGEKDPP True PC9_epitope_Rep2 868.4290466460399 868.4279499358599 37.488 2 -2.706475692673241 0.4711438991003041 1.0 ['nc|ENSG00000149541|O94766-2|B3GAT3', 'ENST00000532585.5_1_11:62383175-62388587:-|nuORF', 'ENSG00000149541|ENST00000265471|B3GAT3'] 124554 21951 VGVPTRAR True PC9_epitope_Rep5 854.5086343794198 854.50808496793 89.474 1 -2.706583764619362 0.4711438991003041 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 79497 22434 PCCCSSCCGS True PC9_epitope_Rep2 948.22680138948 948.22570993586 91.783 2 -2.7078512712806124 0.47117152888071556 1.0 ['KRTAP5-3|p.G140C|1|0.38|ENSG00000196224|chr11:1607968-1607968|C/A|missense_variant'] 112414 18372 TLCQTKVR True PC9_epitope_Rep2 947.5222358382299 947.52112993586 75.997 2 -2.707971534891455 0.47117152888071556 1.0 ['ENST00000593099.5_1_17:33326330-33329895:+|nuORF'] 47670 12414 IWREENQPG True H1975_Epitope_Rep2 1127.5359713260698 1127.5348699358601 52.836 2 -2.708706551491925 0.47117152888071556 1.0 ['ENST00000557419.5_1_14:86027575-86029039:+|nuORF'] 59000 23891 LEVKVVPK True NCI_RA007_Epitope_Rep4 910.5851533646198 910.58404993586 103.63 2 -2.7088509951680857 0.47117152888071556 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D'] 15354 24041 EAGKSKIK True NCI_RA007_Epitope_Rep2 859.5127167003499 859.5121649679301 100.97 1 -2.70899859364448 0.47117152888071556 1.0 ['nc|ENSG00000060749|Q2KHR3-2|QSER1', 'ENST00000594708.1_1_9:72809421-72833242:-|nuORF', 'nc|ENSG00000149090|Q6UXH9-2|PAMR1', 'ENST00000569683.5_1_16:67144033-67168649:+|nuORF'] 30537 11725 GAGPPPQF True NCI_RA007_Epitope_Rep2 769.3758888743699 769.37534496793 50.204 1 -2.709345247919415 0.47119795204012327 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 119501 13656 VARTSSAP True PC9_epitope_Rep2 787.41881631551 787.41770993586 57.82 2 -2.7103563937838917 0.471198553919776 1.0 ['ENST00000398868.7_1_11:63398693-63398756:-|nuORF'] 124444 13934 VGVGSHAA True H1975_Epitope_Rep2 696.3554877829599 696.35493496793 58.746 1 -2.710419709976992 0.471198553919776 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 132620 14679 VVFLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 61.832 2 -2.7106522396987787 0.47121452752121035 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 55827 8146 LAPIIQEFFSS True H1975_Epitope_Rep2 1250.65468947642 1250.65303490379 36.283 3 -2.711252573365892 0.47121512903562845 1.0 ['ENSG00000162882|ENST00000294973|HAAO'] 13908 21717 DQVQAKRP True PC9_epitope_Rep6 940.5090283022399 940.50792993586 96.42 2 -2.711509751455348 0.47121512903562845 1.0 ['ENST00000335661.6_1_15:80263304-80263385:-|nuORF'] 80747 17076 PHGGSLHV True NCI_RA007_Epitope_Rep4 802.40858598498 802.40748993586 73.983 2 -2.712649756218359 0.4712273810021313 1.0 ['ENSG00000151615|ENST00000281321|POU4F2'] 48461 8552 KAAQVTAG True PC9_epitope_Rep4 744.4130026590799 744.4124549679301 40.374 1 -2.7136162246993165 0.4712273810021313 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 52899 21859 KPGERKKT True PC9_epitope_Rep4 942.5610638750999 942.55996993586 92.286 2 -2.7137059131154904 0.4712273810021313 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.M822*|1|0.34|ENSG00000179603|chr7:126446340-126446340|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 69985 10314 LVLQREKH True PC9_epitope_Rep5 1021.6032630402499 1021.60216993586 44.658 2 -2.714368568414173 0.4712273810021313 1.0 ['ENSG00000257365|ENST00000246166|FNTB', 'nc|ENSG00000257365|P49356-2|FNTB', 'ENST00000555372.5_1_14:65453620-65488730:+|nuORF'] 29897 15362 FVVLIVPM True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 66.759 2 -2.7144045805291346 0.4712273810021313 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 9786 20864 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 90.405 2 -2.7146672020659657 0.4712273810021313 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.A89S|1|0.24|ENSG00000167972|chr16:2326064-2326064|C/A|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 92694 2427 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 13.438 3 -2.7164559572535536 0.4712660489119647 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 95166 22229 RVGPGDPVH True PC9_epitope_Rep6 932.4828135544001 932.48170993586 98.462 2 -2.7169274202213063 0.4712660489119647 1.0 ['ENST00000494374.5_1_7:32997059-33028356:+|nuORF', 'ENST00000469202.5_1_7:32997059-33014827:+|nuORF'] 3049 20820 AFSFRHAA True H1975_Epitope_Rep2 905.4507851501298 905.44968993586 86.209 2 -2.7171619671055263 0.4712660489119647 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2'] 131472 23034 VTKARLTDK True PC9_epitope_Rep2 1030.61349337078 1030.6123899358602 94.094 2 -2.7180722912500106 0.4712660489119647 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.M743*|1|0.07|ENSG00000067900|chr18:20987018-20987028|CGTCTAGCATG/-|frameshift_variant'] 105323 24273 SRPPGGGG True PC9_epitope_Rep2 683.3350866915499 683.33453496793 98.907 1 -2.718512562534173 0.4712660489119647 1.0 ['ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 105484 15828 SRYDGAGS True NCI_RA007_Epitope_Rep5 811.3460452980698 811.34494993586 67.603 2 -2.718894154636207 0.4712660489119647 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'ENST00000529558.1_1_11:46526218-46534359:-|nuORF'] 103364 23598 SPPGPPRK True PC9_epitope_Rep3 834.47118624154 834.47008993586 96.055 2 -2.719220169435651 0.4712660489119647 1.0 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1'] 125771 23863 VKVILDKY True NCI_RA007_Epitope_Rep3 976.5957180483199 976.59516496793 103.39 1 -2.721637671126584 0.4712696505980049 1.0 ['nc|ENSG00000137648|Q9NRS4-4|TMPRSS4'] 52709 24506 KMDKKMKKAR True PC9_epitope_Rep4 1262.7315174118198 1262.73040993586 102.75 2 -2.721707848192935 0.4712696505980049 1.0 ['ENSG00000065183|ENST00000349139|WDR3', 'WDR3|p.E703Rfs*52|1|0.16|ENSG00000065183|chr1:117952616-117952616|G/-|frameshift_variant', 'WDR3|p.K316E|1|0.45|ENSG00000065183|chr1:117941804-117941804|A/G|missense_variant'] 13904 12185 DQVGILAGWFK True NCI_RA007_Epitope_Rep2 1232.65535818276 1232.6542699358602 51.994 2 -2.722023461963071 0.4712696505980049 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B'] 131817 25368 VTQLHKLAR True PC9_epitope_Rep3 1064.6454622054 1064.64487496793 103.0 1 -2.722340431570222 0.4712696505980049 1.0 ['ENSG00000204839|ENST00000398882|MROH6'] 130786 13603 VTAGHFSH True H1975_Epitope_Rep3 854.4035006045401 854.4029549679301 57.609 1 -2.7232003161639455 0.4712696505980049 1.0 ['ITGA9-SEC13|1|fusion', 'ENSG00000144668|ENST00000264741|ITGA9'] 124385 21213 VGVAPALP True PC9_epitope_Rep2 722.4326754745 722.43212496793 87.054 1 -2.723541690086899 0.4712696505980049 1.0 ['ENST00000467658.1_1_22:40696928-40697447:+|nuORF'] 126428 24203 VLKLKKLV True NCI_RA007_Epitope_Rep5 939.68447348307 939.68392496793 100.51 1 -2.723671400276357 0.4712696505980049 1.0 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 53196 16632 KQEEVLRK True NCI_RA007_Epitope_Rep3 1028.5978433066398 1028.59674993586 73.204 2 -2.723799890847031 0.4712696505980049 1.0 ['nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 21338 24196 ERFHLGLFT True PC9_epitope_Rep1 1118.5872786229397 1118.5861899358601 97.885 2 -2.724262159737487 0.4712696505980049 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 3859 7550 AGWGGHPA True H1975_Epitope_Rep2 751.34017207199 751.33962496793 33.993 1 -2.7249220452559504 0.4712696505980049 1.0 ['ENSG00000142235|ENST00000600059|LMTK3'] 114102 17168 TPGARGLR True PC9_epitope_Rep2 826.47733425114 826.47622993586 71.296 2 -2.725078238359265 0.4712696505980049 1.0 ['ENST00000379568.3_1_6:10695190-10697573:+|nuORF'] 125416 25000 VISYKIRFR True PC9_epitope_Rep3 1180.70806246196 1180.7069699358601 101.51 2 -2.7253369698695527 0.4712696505980049 1.0 ['ENST00000555311.1_1_14:31578566-31578662:-|nuORF'] 61643 24070 LKQLVAYV True NCI_RA007_Epitope_Rep3 932.5695033004798 932.56895496793 104.23 1 -2.7263538917976557 0.47129174108774896 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 72345 26253 MIREADVD True H1975_Epitope_Rep1 947.4382314307499 947.4376849679301 109.06 1 -2.7266077616680526 0.47129174108774896 1.0 ['ENSG00000178372|ENST00000380332|CALML5'] 135355 12384 WGQKKLIS True NCI_RA007_Epitope_Rep4 958.5600012459399 958.55890993586 54.631 2 -2.7266331074173222 0.47129174108774896 1.0 ['nc|ENSG00000133317|Q96DT0-4|LGALS12', 'nc|ENSG00000133317|Q96DT0-2|LGALS12', 'ENSG00000133317|ENST00000394618|LGALS12', 'nc|ENSG00000133317|Q96DT0-6|LGALS12', 'nc|ENSG00000133317|Q96DT0-3|LGALS12', 'nc|ENSG00000133317|Q96DT0|LGALS12', 'nc|ENSG00000133317|Q96DT0-7|LGALS12'] 101149 8822 SLGRQHFR True PC9_epitope_Rep2 999.53624610959 999.53514993586 39.285 2 -2.7266868155180646 0.47129174108774896 1.0 ['ENST00000421223.5_1_7:44613483-44613774:-|nuORF'] 39401 23387 HKPLLIDM True PC9_epitope_Rep1 965.53682327321 965.53572993586 94.739 2 -2.727580903659353 0.4712929404760661 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 64156 24888 LPFLAAFY True PC9_epitope_Rep3 940.5058404147599 940.50474993586 101.11 2 -2.728085807648775 0.4712929404760661 1.0 ['ENSG00000120436|ENST00000366834|GPR31'] 34388 11029 GPGKGHGK True NCI_RA007_Epitope_Rep1 736.39802130128 736.3974749679301 46.897 1 -2.728163721894822 0.4712929404760661 1.0 ['ENSG00000184083|ENST00000375180|FAM120C'] 10529 4622 CLFWRHCEH True PC9_epitope_Rep2 1229.5222529215698 1229.5211499358602 23.146 2 -2.7286079727114125 0.4712929404760661 1.0 ['GUCY2F|p.G1004Wfs*34|1|0.4|ENSG00000101890|chrX:109385229-109385230|-/A|frameshift_variant'] 115523 19757 TRRRRFSRTV True NCI_RA007_Epitope_Rep5 1333.7803329687697 1333.77922993586 82.906 2 -2.7332337407431564 0.47131502814709597 1.0 ['ENSG00000145526|ENST00000382275|CDH18'] 1626 21158 AEFLVKSK True H1975_Epitope_Rep1 920.53311779176 920.53202993586 87.895 2 -2.7334164424106917 0.47131502814709597 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 44049 24465 IIKEWAAY True H1975_Epitope_Rep3 992.5331177917599 992.53202993586 101.83 2 -2.7340915306751326 0.47131502814709597 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 45265 23154 IPVFFAWR True PC9_epitope_Rep6 1034.5701720068198 1034.5690699358602 102.16 2 -2.7343510813900087 0.47131502814709597 1.0 ['ENST00000510784.8_1_6:24875969-25042131:-|nuORF'] 78111 22011 NWGGLGLL True PC9_epitope_Rep6 828.4493881678 828.44828993586 97.588 2 -2.7367687064689132 0.47136232610602835 1.0 ['ENST00000238379.9_1_9:116136341-116136734:-|nuORF'] 38683 16390 HFYRRYFWLVV True NCI_RA007_Epitope_Rep1 1584.8353882334 1584.8342899358602 67.866 2 -2.737270010310773 0.4713991791036982 1.0 ['ENSG00000188582|ENST00000340634|PAQR9'] 19703 18904 ELRNRNFGK True PC9_epitope_Rep1 1132.6101393258398 1132.6090499358602 77.499 2 -2.7384555626016707 0.47141514360313314 1.0 ['LAMA3-ZNF521|4|fusion', 'ENSG00000053747|ENST00000313654|LAMA3', 'LAMA3-ZNF521|1|fusion', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'ENST00000586709.1_1_18:21478707-21479460:+|nuORF'] 129606 27449 VRPAGRAPA True PC9_epitope_Rep1 893.51953341629 893.51842993586 112.27 2 -2.7411836354834405 0.47143662795555186 1.0 ['ENST00000465752.1_1_22:24237017-24237290:+|nuORF'] 109335 25070 TCCTCSIS True PC9_epitope_Rep1 816.28159676032 816.28048993586 101.34 2 -2.741521604245007 0.47143662795555186 1.0 ['HTR1F|p.L112Sfs*4|1|0.1|ENSG00000179097|chr3:87991079-87991085|CATCTTG/-|frameshift_variant'] 113385 24871 TLSAHLIKH True PC9_epitope_Rep5 1018.59236400338 1018.5912699358599 100.82 2 -2.7443730377778244 0.4714525915637108 1.0 ['ENSG00000173258|ENST00000309235|ZNF483', 'ZNF483|p.Q514H|1|0.22|ENSG00000173258|chr9:111542477-111542477|G/C|missense_variant'] 112238 23449 TKPRKEKT True PC9_epitope_Rep2 986.5872786229398 986.58618993586 95.668 2 -2.7459754398165126 0.4714531878230902 1.0 ['ENSG00000137440|ENST00000382333|FGFBP1'] 132725 23310 VVHSALLA True NCI_RA007_Epitope_Rep3 808.48068829608 808.47958993586 101.24 2 -2.7470048084365137 0.4714531878230902 1.0 ['ENSG00000104442|ENST00000276569|ARMC1'] 13512 5595 DNMRTWKAD True PC9_epitope_Rep5 1135.50804232607 1135.5069499358601 26.524 2 -2.74877490790095 0.47150048038765197 1.0 ['GAB3|p.A522Qfs*6|1|0.12|ENSG00000160219|chrX:154680201-154680213|CCACGTAAGGGCA/-|frameshift_variant', 'nc|ENSG00000160219|Q8WWW8-3|GAB3', 'nc|ENSG00000160219|Q8WWW8|GAB3', 'ENSG00000160219|ENST00000424127|GAB3'] 105245 24704 SRKKNLYL True NCI_RA007_Epitope_Rep5 1020.6080140675199 1020.6074749679301 102.51 1 -2.749424843445959 0.47150107562814597 1.0 ['ENST00000455385.6_1_7:105731866-105731917:-|nuORF'] 79088 19073 PALLVLLFC True NCI_RA007_Epitope_Rep4 987.5827108364699 987.58160993586 82.509 2 -2.749465279256212 0.47150107562814597 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.Q116Nfs*29|1|0.28|ENSG00000126259|chr19:35858540-35858540|C/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 81762 24715 PLPKIILE True PC9_epitope_Rep2 921.58990439189 921.58935496793 100.75 1 -2.7498622833456157 0.4715016708437761 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'nc|ENSG00000130997|Q7Z5Q5-3|POLN', 'ENST00000515357.5_1_4:2158125-2230958:-|nuORF', 'ENST00000510344.1_1_4:2158487-2160929:-|nuORF'] 126480 25438 VLLHTLGV True PC9_epitope_Rep2 850.5276384885 850.52708496793 103.53 1 -2.7507873368893687 0.4715016708437761 1.0 ['ENST00000318673.6_1_2:220033361-220034039:-|nuORF'] 97486 4707 SEEKGAAL True PC9_epitope_Rep4 803.4024975450299 803.40140993586 24.651 2 -2.75163799209634 0.47150718977454287 1.0 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000556340.1_1_9:139265151-139266545:-|nuORF', 'nc|ENSG00000289701|Q9H257-3|CARD9'] 11517 6274 DFLFGNIRELY True H1975_Epitope_Rep2 1385.6979512707298 1385.6968499358602 29.078 2 -2.7528634251455006 0.4715127085900462 1.0 ['nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2'] 132611 19568 VVFLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 81.197 2 -2.7536112646283195 0.4715133035378639 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 38701 24551 HGDTALHA True H1975_Epitope_Rep3 820.3827651599601 820.38166993586 102.17 2 -2.7537146831289476 0.4715133035378639 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 45669 8944 IRIYIHMCLLW True PC9_epitope_Rep5 1459.78321863151 1459.78156490379 39.348 3 -2.7538300374440623 0.47151389846083164 1.0 ['nc|ENSG00000185013|Q96P26-4|NT5C1B', 'nc|ENSG00000185013|Q96P26|NT5C1B'] 72180 14876 MGLAGGRI True H1975_Epitope_Rep2 773.42179352097 773.42068993586 62.372 2 -2.753972037386331 0.47151389846083164 1.0 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Nfs*41|1|0.31|ENSG00000068024|chr2:239053574-239053593|GTGCGCTGCAGGCAGCGCCA/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000494800.1_1_2:239977015-240002822:-|nuORF'] 21456 4720 ERKQRELQEQE True H1975_Epitope_Rep1 1471.73791858975 1471.73626490379 23.208 3 -2.7564096739615707 0.4715194169181451 1.0 ['nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2'] 127612 24358 VPAAAAAH True H1975_Epitope_Rep3 706.3762232275401 706.3756749679301 101.43 1 -2.757286046850222 0.47153045348703654 1.0 ['ENST00000358689.8_2_8:23290247-23290583:-|nuORF'] 25909 21115 FFPPFLRVF True NCI_RA007_Epitope_Rep2 1168.64333694708 1168.64222993586 87.34 2 -2.7574237685063077 0.47153045348703654 1.0 ['ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 124386 21431 VGVAPALP True PC9_epitope_Rep2 722.4326754745 722.43212496793 87.908 1 -2.758262347493682 0.47155193116914307 1.0 ['ENST00000467658.1_1_22:40696928-40697447:+|nuORF'] 69597 17032 LVDMAKKL True NCI_RA007_Epitope_Rep4 916.54157430048 916.54046993586 73.798 2 -2.7586755085434134 0.47155193116914307 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 122035 26526 VFVVDSSH True H1975_Epitope_Rep3 888.43413202648 888.43302993586 110.75 2 -2.758760845306563 0.47155252524197844 1.0 ['nc|ENSG00000113595|P36406-3|TRIM23', 'nc|ENSG00000113595|P36406-2|TRIM23', 'ENSG00000113595|ENST00000231524|TRIM23'] 89752 19366 RAFRIYFRF True NCI_RA007_Epitope_Rep4 1274.7036457878596 1274.70199490379 83.756 3 -2.759002900882817 0.47155252524197844 1.0 ['ENSG00000102452|ENST00000251127|NALCN', 'nc|ENSG00000102452|Q8IZF0-3|NALCN', 'ENST00000497170.5_1_13:101944713-102068675:-|nuORF', 'nc|ENSG00000102452|Q8IZF0-2|NALCN', 'ENST00000470333.1_1_13:101833448-102051507:-|nuORF', 'NALCN|p.R717Gfs*14|1|0.32|ENSG00000102452|chr13:101124651-101124651|T/-|frameshift_variant'] 45758 9078 ISAHHQLLHQ True PC9_epitope_Rep5 1182.6257893899801 1182.62468993586 39.864 2 -2.7603284404438564 0.4715740015661707 1.0 ['ENST00000355508.3_1_7:2966407-2969665:-|nuORF', 'ENST00000396946.8_1_7:2966407-2969665:-|nuORF'] 117878 23152 TWARKVLV True H1975_Epitope_Rep3 971.5916357273899 971.59052993586 96.681 2 -2.760347970342757 0.4715740015661707 1.0 ['ENSG00000133030|ENST00000651222|MPRIP'] 49731 25024 KGRFLLLM True H1975_Epitope_Rep2 976.5891931992398 976.58808993586 102.83 2 -2.761094330682945 0.47157951887738053 1.0 ['ENST00000567744.5_1_15:65891231-65891273:-|nuORF'] 39596 24859 HLKLGARFR True NCI_RA007_Epitope_Rep5 1096.6617809758798 1096.66068993586 103.11 2 -2.7629876775736406 0.47158503607337876 1.0 ['ENST00000389262.8_1_22:19048277-19109719:-|nuORF'] 79324 5159 PARIHGCYKQC True PC9_epitope_Rep1 1274.6012315182597 1274.59957490379 24.696 3 -2.7641123686088918 0.47159233274868456 1.0 ['ENST00000481800.1_1_20:61463177-61467329:+|nuORF'] 139787 9734 YPGPGGGG True NCI_RA007_Epitope_Rep1 660.2867395167999 660.2861949679301 41.864 1 -2.764115165758658 0.47159233274868456 1.0 ['ENSG00000168303|ENST00000306984|MPLKIP'] 139345 25067 YLLMIFKLVQ True PC9_epitope_Rep5 1266.74100238302 1266.7399099358602 101.56 2 -2.764661715346357 0.47159233274868456 1.0 ['HRNR|p.S1837Pfs*154|1|0.12|ENSG00000197915|chr1:152216121-152216121|C/-|frameshift_variant', 'HRNR|p.W2324Cfs*137|1|0.1|ENSG00000197915|chr1:152214657-152214657|C/-|frameshift_variant', 'ENSG00000197915|ENST00000368801|HRNR', 'CON__Q86YZ3'] 94482 22444 RRRRRRNYFA True PC9_epitope_Rep6 1449.8290144966898 1449.8279099358601 99.326 2 -2.764809730720835 0.47159233274868456 1.0 ['ENST00000473523.1_1_3:85008309-85008745:+|nuORF'] 120717 23441 VEKKKQIQH True PC9_epitope_Rep6 1136.6665915728 1136.66548993586 103.27 2 -2.765868166945855 0.47159233274868456 1.0 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-5|ZNF280D'] 11662 3798 DGQFLPHGW True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 19.71 2 -2.766216956468027 0.47159233274868456 1.0 ['SLC7A14|p.E243D|1|0.57|ENSG00000013293|chr3:170498697-170498697|C/G|missense_variant'] 81744 22429 PLPEVIGI True PC9_epitope_Rep4 836.5007550343199 836.49964993586 94.504 2 -2.766274044136932 0.47159233274868456 1.0 ['SCN4A|p.P72L|1|0.09|ENSG00000007314|chr17:63972627-63972627|G/A|missense_variant'] 67482 5752 LSSSSHGVP True PC9_epitope_Rep5 869.42429561877 869.42318993586 27.119 2 -2.766979679836455 0.4715984423773581 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 100031 24777 SIQRVLADLKV True NCI_RA007_Epitope_Rep5 1240.7503211967598 1240.74922993586 102.79 2 -2.766982703140472 0.4715984423773581 1.0 ['ENSG00000101132|ENST00000371419|PFDN4', 'ENST00000487129.1_1_20:52825073-52835686:+|nuORF'] 10423 22214 CHKNDIVH True H1975_Epitope_Rep3 964.4548845544 964.45378993586 92.899 2 -2.7670116313436486 0.4715984423773581 1.0 ['CDKL5|p.S744Vfs*40|1|0.06|ENSG00000008086|chrX:18613229-18613229|A/-|frameshift_variant', 'ENSG00000008086|ENST00000623535|CDKL5', 'nc|ENSG00000008086|O76039-1|CDKL5'] 81065 16990 PIRHVSPARP True PC9_epitope_Rep5 1128.651610215 1128.64996490379 70.371 3 -2.7691258014880185 0.47161499112642236 1.0 ['ENST00000564176.5_1_16:31487200-31487686:+|nuORF'] 52783 25695 KNKVKGGA True PC9_epitope_Rep2 800.4868363056798 800.48628496793 104.54 1 -2.7692644756401608 0.47161499112642236 1.0 ['SCN1A|p.I1947V|1|0.37|ENSG00000144285|chr2:165991436-165991436|T/C|missense_variant'] 4184 7007 AHWAAAGG True NCI_RA007_Epitope_Rep5 739.3401720719899 739.33962496793 33.631 1 -2.7694818662625376 0.47161499112642236 1.0 ['ENSG00000235098|ENST00000537107|ANKRD65'] 10663 23204 CPPPCSSV True PC9_epitope_Rep6 788.3196965212001 788.31858993586 102.35 2 -2.770065046264816 0.4716210996628146 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 119368 14881 VAPFPGSS True NCI_RA007_Epitope_Rep4 760.3755545212 760.37444993586 64.702 2 -2.770428858875858 0.4716210996628146 1.0 ['ENST00000357258.8_2_3:114050167-114050428:-|nuORF'] 90024 24047 RDRPAAAK True PC9_epitope_Rep2 883.4987979717098 883.49770993586 97.999 2 -2.770436743885904 0.4716210996628146 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2'] 39915 23071 HPFVEVSF True NCI_RA007_Epitope_Rep5 960.4705175352 960.46942993586 95.989 2 -2.7739727620341434 0.47167881078146856 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B', 'CC2D2B|p.A87Vfs*6|1|0.09|ENSG00000188649|chr10:96012670-96012671|-/TTTATTTTTGC|frameshift_variant', 'CC2D2B|p.A87Nfs*19|1|0.09|ENSG00000188649|chr10:96012669-96012670|-/AACCAAT|frameshift_variant'] 11991 3562 DHQPGDIF True PC9_epitope_Rep1 927.40864555463 927.40754993586 18.628 2 -2.774445900414769 0.47170027976115914 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 62676 25504 LLLKSKVTA True PC9_epitope_Rep2 971.6379172134699 971.63736496793 103.78 1 -2.7745600639611623 0.47170027976115914 1.0 ['ENSG00000187954|ENST00000530374|ZFTRAF1', 'nc|ENSG00000291317|P0DTL6-2|ZFTRAF1', 'nc|ENSG00000291317|P0DTL6-1|ZFTRAF1'] 82134 19810 PNHQTPME True NCI_RA007_Epitope_Rep5 952.4072656556399 952.40616993586 83.11 2 -2.775200378390557 0.47170579454471434 1.0 ['ENSG00000126249|ENST00000246535|PDCD2L'] 124800 24876 VHFPKLQLK True NCI_RA007_Epitope_Rep1 1108.6756997045197 1108.6746099358602 102.96 2 -2.775797427505115 0.4717217478444226 1.0 ['ENST00000266880.11_1_12:133417602-133417977:-|nuORF'] 92204 25370 RLHTGVKRY True NCI_RA007_Epitope_Rep1 1128.651610215 1128.65050993586 104.97 2 -2.777081763505648 0.471722928540114 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611'] 92695 2490 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 13.778 3 -2.777520775595695 0.471722928540114 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 34131 18692 GNAIEKQKPL True NCI_RA007_Epitope_Rep1 1096.62405805448 1096.62296993586 76.85 2 -2.7777052151004256 0.471722928540114 1.0 ['nc|ENSG00000107263|Q13905-3|RAPGEF1'] 35295 24711 GRIPKTYKEK True PC9_epitope_Rep4 1218.70845638478 1218.70734993586 103.54 2 -2.7777803968182084 0.471722928540114 1.0 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1'] 69591 20915 LVDMAKKL True H1975_Epitope_Rep2 916.54157430048 916.54046993586 86.585 2 -2.778194277277236 0.47172351885098746 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 103914 18970 SQALEKLGRL True NCI_RA007_Epitope_Rep2 1113.65060715549 1113.6495099358601 78.643 2 -2.7785703422390093 0.47172351885098746 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF', 'ENST00000486253.1_1_15:91479504-91483847:+|nuORF', 'ENST00000553671.6_1_15:91478554-91486156:+|nuORF', 'UNC45A-BLM|2|fusion', 'UNC45A-BLM|1|fusion'] 61763 12037 LLAKGSCSY True NCI_RA007_Epitope_Rep3 940.46880328304 940.46770993586 54.472 2 -2.7789816701954457 0.4717241091372148 1.0 ['NEU2|p.A333S|1|0.32|ENSG00000115488|chr2:233034911-233034911|G/T|missense_variant'] 118982 13737 VAEGHPGL True PC9_epitope_Rep5 778.3973525949399 778.39680496793 57.862 1 -2.7793348155009774 0.4717241091372148 1.0 ['ENST00000338820.7_1_10:74095033-74095504:-|nuORF'] 116384 12145 TTHEKIQA True PC9_epitope_Rep2 926.4821448480599 926.48104993586 52.025 2 -2.779564287179535 0.47172962309643346 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1', 'nc|ENSG00000151746|Q96G01-2|BICD1'] 69589 20232 LVDMAKKL True H1975_Epitope_Rep2 916.54157430048 916.54046993586 83.845 2 -2.7820924686600987 0.47177688710754845 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 25872 13919 FFIYLYQRWIY True NCI_RA007_Epitope_Rep2 1610.82857151746 1610.82746993586 58.797 2 -2.7835341002299665 0.47178240040079744 1.0 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 120771 22219 VELAPLPP True PC9_epitope_Rep3 834.4851049701799 834.4845549679301 90.752 1 -2.7840429111710296 0.47179342664203483 1.0 ['ENST00000585439.1_1_19:10446311-10450252:-|nuORF', 'ENST00000587992.1_1_19:10446311-10450332:-|nuORF', 'ENSG00000076662|ENST00000160262|ICAM3'] 99382 24321 SHTSEGAH True PC9_epitope_Rep2 824.3412942708001 824.3401899358599 99.092 2 -2.784127415600845 0.47179342664203483 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 87250 13642 QPLTGHRP True PC9_epitope_Rep2 904.48789893484 904.4873549679301 57.766 1 -2.7851282684483802 0.4718068064411768 1.0 ['ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 50098 25094 KKKAGPGS True PC9_epitope_Rep1 771.4602872046698 771.4597349679301 101.41 1 -2.7889107565565667 0.4718068064411768 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 27055 4355 FLFFLVIYTLT True PC9_epitope_Rep1 1375.7791617135497 1375.77751490379 21.639 3 -2.7894626407502154 0.4718068064411768 1.0 ['ENSG00000149133|ENST00000278409|OR5F1', 'OR5F1|p.P183Hfs*12|1|0.08|ENSG00000149133|chr11:55994078-55994078|G/-|frameshift_variant'] 10660 23518 CPPPCSSV True NCI_RA007_Epitope_Rep3 788.3196965212001 788.31858993586 102.04 2 -2.790367988542837 0.4718068064411768 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 46096 11369 ISHLKEAE True PC9_epitope_Rep2 925.4868958753299 925.48578993586 49.052 2 -2.7904122227382873 0.4718068064411768 1.0 ['ENSG00000011198|ENST00000644371|ABHD5', 'ENST00000486764.1_1_3:43732436-43740870:+|nuORF'] 30076 9915 FYILFFPFWIW True NCI_RA007_Epitope_Rep1 1577.8111305481698 1577.81002993586 42.57 2 -2.7904744180307364 0.4718068064411768 1.0 ['ENSG00000126821|ENST00000247225|SGPP1'] 38653 12879 HFPEVMLG True NCI_RA007_Epitope_Rep1 928.4476739156399 928.44656993586 54.087 2 -2.7918238073925687 0.4718068064411768 1.0 ['nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'ENST00000504496.5_1_5:136997591-137028142:-|nuORF', 'ENST00000504208.5_1_5:136964069-137033992:-|nuORF'] 128278 24581 VPPLSTSL True PC9_epitope_Rep4 812.4643695256001 812.46326993586 103.04 2 -2.7921638484756577 0.4718068064411768 1.0 ['ENSG00000135547|ENST00000368364|HEY2'] 49638 13829 KGGRKGGH True NCI_RA007_Epitope_Rep5 795.4463684760299 795.44526993586 59.87 2 -2.7923046605995663 0.4718068064411768 1.0 ['ENSG00000106244|ENST00000350498|PDAP1', 'ENST00000512074.1_1_5:84845227-84845416:+|nuORF'] 20289 964 ENSDNDDD True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 5.4043 2 -2.7926567510193934 0.4718068064411768 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 49732 23758 KGRFLLLM True NCI_RA007_Epitope_Rep4 976.5891931992398 976.58808993586 103.0 2 -2.793755646972851 0.4718123186742084 1.0 ['ENST00000567744.5_1_15:65891231-65891273:-|nuORF'] 103765 7005 SPVSRGSQE True PC9_epitope_Rep5 945.4515729957699 945.45046993586 31.912 2 -2.7944476272432044 0.4718491385158052 1.0 ['nc|ENSG00000151079|P17658|KCNA6'] 39983 24801 HPLPGMTH True H1975_Epitope_Rep3 888.4276071774002 888.4265099358599 103.16 2 -2.795821494054343 0.4718497260631359 1.0 ['ENST00000571657.5_1_17:19281216-19286541:+|nuORF'] 30995 19364 GASGHPPI True H1975_Epitope_Rep1 734.3711378471 734.3705849679301 80.667 1 -2.796373640771645 0.4718497260631359 1.0 ['ENST00000485673.5_1_20:57464182-57464599:+|nuORF'] 99033 22499 SHEESQKP True NCI_RA007_Epitope_Rep5 940.4250238947599 940.42392993586 93.719 2 -2.7974266532909793 0.47185523761818293 1.0 ['ENSG00000174948|ENST00000389740|GPR149'] 99379 22176 SHTSEGAH True H1975_Epitope_Rep1 824.3412942708001 824.3401899358599 92.27 2 -2.80023572179223 0.47186074905819864 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 41278 22660 HVPNGGRV True PC9_epitope_Rep2 834.4460341228599 834.44492993586 92.658 2 -2.8007545030981045 0.47186779480652263 1.0 ['ENSG00000118094|ENST00000264029|TREH', 'nc|ENSG00000118094|O43280-2|TREH'] 105882 15794 SSPPNKLS True H1975_Epitope_Rep2 828.43413202648 828.43302993586 65.936 2 -2.8016661267535015 0.47186779480652263 1.0 ['nc|ENSG00000275410|P35680-3|HNF1B', 'nc|ENSG00000275410|P35680-4|HNF1B', 'nc|ENSG00000275410|P35680-2|HNF1B', 'ENSG00000275410|ENST00000617811|HNF1B'] 32782 23257 GHFCLCPL True PC9_epitope_Rep3 888.39861554824 888.39750993586 94.734 2 -2.801680425900001 0.47186779480652263 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 85083 23865 QEKLDAFF True H1975_Epitope_Rep2 996.4916469025999 996.49054993586 98.308 2 -2.8025822737002306 0.47186779480652263 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4', 'NLRP4|p.E797Nfs*16|1|0.56|ENSG00000160505|chr19:55870861-55870861|G/-|frameshift_variant'] 62440 9977 LLHPKEAT True PC9_epitope_Rep2 907.5127167003501 907.51160993586 43.706 2 -2.802854457474761 0.47186779480652263 1.0 ['ENST00000318003.11_1_19:14041215-14041674:+|nuORF'] 92148 23841 RLEHEKRRKEI True PC9_epitope_Rep5 1492.85864285912 1492.8569849037901 96.685 3 -2.8029684812770848 0.47186779480652263 1.0 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 69590 20412 LVDMAKKL True H1975_Epitope_Rep2 916.54157430048 916.54046993586 84.577 2 -2.8036455634470214 0.47186779480652263 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 36570 22514 GVHDAPPP True PC9_epitope_Rep2 788.3817025308 788.38115496793 92.089 1 -2.80374884963122 0.47186779480652263 1.0 ['ENST00000596700.5_1_19:50084718-50093643:+|nuORF', 'ENST00000597121.5_1_19:50086773-50093643:+|nuORF', 'ENSG00000126460|ENST00000246794|PRRG2'] 138112 21050 YGHASSCP True H1975_Epitope_Rep3 820.31738802208 820.31628993586 87.921 2 -2.804167103309214 0.47186779480652263 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant', 'LAMA1|p.H607Afs*3|1|0.16|ENSG00000101680|chr18:7036008-7036009|-/A|frameshift_variant', 'ENST00000579014.5_1_18:7043201-7117719:-|nuORF'] 52586 24642 KLKGSPVI True NCI_RA007_Epitope_Rep2 840.5432885526399 840.54274496793 103.6 1 -2.804184223575094 0.47186779480652263 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.E10282Kfs*26|1|0.26|ENSG00000155657|chr2:178689864-178689864|C/-|frameshift_variant', 'TTN|p.T8506Rfs*11|1|0.14|ENSG00000155657|chr2:178714308-178714308|G/-|frameshift_variant', 'TTN|p.E7502Rfs*11|1|0.2|ENSG00000155657|chr2:178720187-178720187|C/-|frameshift_variant', 'TTN|p.E7218Sfs*38|1|0.23|ENSG00000155657|chr2:178722060-178722060|C/-|frameshift_variant', 'TTN|p.I6193Lfs*36|1|0.29|ENSG00000155657|chr2:178728297-178728297|G/-|frameshift_variant', 'TTN|p.T5244Pfs*3|1|0.11|ENSG00000155657|chr2:178732288-178732288|T/-|frameshift_variant', 'TTN|p.V5229Lfs*4|1|0.1|ENSG00000155657|chr2:178732333-178732333|C/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 140074 21407 YQKTLLGV True H1975_Epitope_Rep1 920.5331177917598 920.53202993586 88.94 2 -2.8044745606744166 0.47186779480652263 1.0 ['ENSG00000110344|ENST00000252108|UBE4A', 'nc|ENSG00000110344|Q14139-2|UBE4A'] 3765 25394 AGSVPHKK True PC9_epitope_Rep2 822.47118624154 822.47008993586 103.36 2 -2.804673305327751 0.47186779480652263 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 122034 26383 VFVVDSSH True H1975_Epitope_Rep3 888.43413202648 888.43302993586 110.07 2 -2.80501024390633 0.47186779480652263 1.0 ['nc|ENSG00000113595|P36406-3|TRIM23', 'nc|ENSG00000113595|P36406-2|TRIM23', 'ENSG00000113595|ENST00000231524|TRIM23'] 49816 20353 KHNPLQCN True PC9_epitope_Rep6 952.4548845544001 952.45378993586 90.986 2 -2.80575806742661 0.47186779480652263 1.0 ['ENST00000374092.8_1_20:34256969-34257164:-|nuORF'] 79089 19169 PALLVLLFC True NCI_RA007_Epitope_Rep4 987.5827108364699 987.58160993586 82.881 2 -2.8069207791944635 0.47186779480652263 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.Q116Nfs*29|1|0.28|ENSG00000126259|chr19:35858540-35858540|C/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 3766 25924 AGSVPHKK True PC9_epitope_Rep5 822.47118624154 822.47008993586 105.2 2 -2.8085863029355624 0.47186779480652263 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 93554 25227 RQLLRHSERL True PC9_epitope_Rep2 1306.75820054186 1306.7571099358602 102.7 2 -2.8087888744570564 0.47186779480652263 1.0 ['PCED1A|p.R428L|1|0.62|ENSG00000132635|chr20:2835544-2835544|C/A|missense_variant'] 140484 10353 YRKMKERL True PC9_epitope_Rep2 1122.6331832695398 1122.6315449037902 45.148 3 -2.8087891807563947 0.47186779480652263 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 69593 17223 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 75.644 2 -2.8091145261762818 0.47186779480652263 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 59421 16340 LFMDARHKR True PC9_epitope_Rep2 1172.6236812149998 1172.62204490379 68.098 3 -2.809201396080071 0.47186779480652263 1.0 ['ENSG00000115596|ENST00000233948|WNT6'] 135633 23213 WLLGLSRV True PC9_epitope_Rep1 942.56508662638 942.56398993586 94.088 2 -2.809469385659139 0.47186779480652263 1.0 ['ENST00000479915.5_1_7:76129456-76134915:+|nuORF'] 81586 25498 PLKQLTVL True PC9_epitope_Rep2 910.5851533646199 910.5846049679301 103.76 1 -2.8102034864141436 0.47186779480652263 1.0 ['ENSG00000161040|ENST00000440067|FBXL13', 'nc|ENSG00000161040|Q8NEE6-3|FBXL13', 'nc|ENSG00000161040|Q8NEE6-2|FBXL13', 'nc|ENSG00000161040|Q8NEE6|FBXL13'] 93618 21975 RQPVVIYS True NCI_RA007_Epitope_Rep3 960.53926580136 960.53816993586 95.474 2 -2.8109169332961828 0.47186779480652263 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT', 'nc|ENSG00000095321|P43155-2|CRAT'] 85538 22344 QGAVTGKPR True PC9_epitope_Rep2 912.5141136826799 912.5130099358599 91.434 2 -2.8121332431587835 0.47186779480652263 1.0 ['ENSG00000073050|ENST00000262887|XRCC1'] 6958 17290 AQKLSEIHK True NCI_RA007_Epitope_Rep3 1052.59784330664 1052.59674993586 75.894 2 -2.8128216686954324 0.47187330467804534 1.0 ['ENSG00000174607|ENST00000310836|UGT8', 'UGT8|p.Q436E|1|0.37|ENSG00000174607|chr4:114675968-114675968|C/G|missense_variant'] 123234 22931 VGLGHPPT True NCI_RA007_Epitope_Rep4 776.4180880395201 776.41753496793 99.583 1 -2.8130089110512033 0.4718738915433889 1.0 ['ENST00000325327.3_1_19:2429436-2429694:-|nuORF'] 107998 24176 SWNQILDPWV True NCI_RA007_Epitope_Rep2 1256.61897267404 1256.6178699358602 101.54 2 -2.814115002206773 0.4718738915433889 1.0 ['ENSG00000160951|ENST00000292513|PTGER1'] 140398 8068 YREWRRYYEVW True H1975_Epitope_Rep1 1704.8161093408 1704.8150099358602 35.977 2 -2.8150896815636224 0.47187565199248904 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 35298 25555 GRKAGPPP True PC9_epitope_Rep2 778.4449714936999 778.44386993586 103.98 2 -2.8156327652907223 0.47187565199248904 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 41288 16981 HVRKKQHR True NCI_RA007_Epitope_Rep4 1087.64752789407 1087.6464299358602 73.595 2 -2.8176409112379117 0.47187565199248904 1.0 ['ZNF277|p.M243V|1|0.16|ENSG00000198839|chr7:112330142-112330142|A/G|missense_variant'] 66700 22314 LSLDWRRRRK True PC9_epitope_Rep2 1384.8163841243197 1384.8152899358602 91.311 2 -2.819711117707842 0.47187565199248904 1.0 ['ENST00000586602.5_1_19:9679707-9694912:-|nuORF', 'ENST00000320451.6_1_19:9679704-9695196:-|nuORF'] 75480 25218 NKKATSLK True NCI_RA007_Epitope_Rep5 888.53926580136 888.5387149679301 104.52 1 -2.8206367147161537 0.47187565199248904 1.0 ['PRB4|p.G170Efs*87|1|0.18|ENSG00000230657|chr12:11308476-11308476|T/-|frameshift_variant'] 118751 15833 TYYREKEE True PC9_epitope_Rep2 1116.50875351872 1116.5076499358602 66.161 2 -2.820764210803074 0.47187565199248904 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.A982Qfs*191|1|0.18|ENSG00000107581|chr10:119042576-119042576|C/-|frameshift_variant'] 40805 23105 HSAAAAAA True PC9_epitope_Rep2 668.32418765468 668.32363496793 94.364 1 -2.8220365998381745 0.47192288834875495 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'EMX2|p.H92Lfs*49|1|0.31|ENSG00000170370|chr10:117543541-117543542|-/T|frameshift_variant', 'nc|ENSG00000170370|Q04743-2|EMX2', 'nc|ENSG00000006377|P56179-2|DLX6', 'ENSG00000006377|ENST00000518156|DLX6', 'ENSG00000166188|ENST00000299237|ZNF319', 'ENSG00000043355|ENST00000376335|ZIC2'] 82066 24256 PMEPLGCA True PC9_epitope_Rep4 816.35099664948 816.34988993586 101.78 2 -2.8226862103860046 0.4719234741245319 1.0 ['CRB2|p.R69L|1|0.35|ENSG00000148204|chr9:123362976-123362976|G/T|missense_variant'] 92693 2269 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 12.576 3 -2.823307299403512 0.4719234741245319 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 95021 19900 RTRLRNRRY True NCI_RA007_Epitope_Rep1 1289.7541182209297 1289.75302993586 81.612 2 -2.8233874278827873 0.47192898272552786 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 123857 22597 VGRQEFSS True NCI_RA007_Epitope_Rep3 908.43519465564 908.43408993586 98.229 2 -2.8251308367953807 0.47194492254733217 1.0 ['ENST00000448841.5_1_10:104573746-104573887:+|nuORF'] 52383 23253 KKLPMFLG True H1975_Epitope_Rep2 932.5517450613598 932.55064993586 95.912 2 -2.8269488210977043 0.4719516011265255 1.0 ['ENST00000274140.9_1_5:10436866-10436944:+|nuORF'] 96443 15388 SAAGNKAP True H1975_Epitope_Rep2 714.3660524666599 714.3655049679301 64.349 1 -2.827786082036633 0.4719516011265255 1.0 ['ENSG00000077514|ENST00000263681|POLD3', 'nc|ENSG00000077514|Q15054-2|POLD3', 'nc|ENSG00000077514|Q15054-3|POLD3'] 42014 15818 IDGILPLHDAV True PC9_epitope_Rep3 1161.63937376545 1161.63826993586 66.0 2 -2.8279752978652546 0.4719516011265255 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 70283 19194 LVRRLLPDSR True NCI_RA007_Epitope_Rep4 1223.7462388758297 1223.7445949037901 82.983 3 -2.828026448153739 0.4719516011265255 1.0 ['ENST00000211314.4_1_6:52535944-52541959:+|nuORF'] 71480 19328 LYWKWLWAKW True PC9_epitope_Rep4 1478.78631278266 1478.7852099358602 82.452 2 -2.8285656772330254 0.4719516011265255 1.0 ['ENST00000377833.8_1_10:17147498-17151673:-|nuORF'] 59265 3692 LFFRVFFFF True NCI_RA007_Epitope_Rep5 1268.6746370753597 1268.6729849037902 20.254 3 -2.8309574818046843 0.47198840108061874 1.0 ['ENST00000371335.4_1_X:119571204-119571369:-|nuORF'] 74640 15953 NGLKSLSA True H1975_Epitope_Rep2 788.43921740692 788.43812993586 66.561 2 -2.832024701990464 0.4720043391188251 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 20088 23456 EMHHSSSY True H1975_Epitope_Rep3 976.3708801469202 976.36978993586 97.894 2 -2.832771733185212 0.4720098463592461 1.0 ['ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A'] 13511 5423 DNMRTWKAD True PC9_epitope_Rep3 1135.50804232607 1135.5069499358601 25.931 2 -2.834307572140825 0.47201535348478213 1.0 ['GAB3|p.A522Qfs*6|1|0.12|ENSG00000160219|chrX:154680201-154680213|CCACGTAAGGGCA/-|frameshift_variant', 'nc|ENSG00000160219|Q8WWW8-3|GAB3', 'nc|ENSG00000160219|Q8WWW8|GAB3', 'ENSG00000160219|ENST00000424127|GAB3'] 76244 25685 NPFIRRQI True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 103.83 2 -2.834878127371616 0.4720191856524686 1.0 ['ENSG00000227124|ENST00000652011|ZNF717'] 118878 23383 VACGASHH True NCI_RA007_Epitope_Rep4 780.3337067925602 780.33260993586 101.51 2 -2.8361637654386556 0.4720191856524686 1.0 ['ENST00000317683.3_1_19:46216786-46234124:-|nuORF'] 39916 23575 HPFVEVSF True NCI_RA007_Epitope_Rep5 960.4705175352 960.46942993586 97.997 2 -2.8365659558270684 0.4720191856524686 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B', 'CC2D2B|p.A87Vfs*6|1|0.09|ENSG00000188649|chr10:96012670-96012671|-/TTTATTTTTGC|frameshift_variant', 'CC2D2B|p.A87Nfs*19|1|0.09|ENSG00000188649|chr10:96012669-96012670|-/AACCAAT|frameshift_variant'] 10337 22306 CFHPEEAH True H1975_Epitope_Rep2 968.3810509078 968.3799499358599 92.183 2 -2.837310859288369 0.4720191856524686 1.0 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'TRIOBP|p.A1541Gfs*12|1|0.18|ENSG00000100106|chr22:37734951-37734952|-/G|frameshift_variant'] 32781 20110 GHFCLCPL True NCI_RA007_Epitope_Rep4 888.39861554824 888.39750993586 87.002 2 -2.8373788882203486 0.4720191856524686 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 52806 15702 KNVNPGKR True NCI_RA007_Epitope_Rep3 911.5300980999899 911.52900993586 69.402 2 -2.837450775669112 0.4720191856524686 1.0 ['ENSG00000145794|ENST00000503335|MEGF10', 'ENST00000515622.1_1_5:126783361-126801299:+|nuORF'] 92697 2729 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 15.028 3 -2.8386501763002894 0.4720191856524686 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 47695 12502 IYALMLYI True PC9_epitope_Rep6 998.5510763550201 998.5505249679301 59.515 1 -2.838863742668008 0.4720191856524686 1.0 ['HSMAR1_dup583|chr14:23628624-23629718:+|1.7841419024017564|0.342314790317388|2.38|516.0|12|2|sense'] 134703 23316 VYTLRNKEIK True PC9_epitope_Rep6 1262.7346711326202 1262.73356993586 102.79 2 -2.8395858508657934 0.4720191856524686 1.0 ['ENSG00000204688|ENST00000377133|OR2H1'] 141560 23748 YTNQLLQAM True PC9_epitope_Rep4 1080.5273807883198 1080.5262899358602 99.724 2 -2.839995855648836 0.4720191856524686 1.0 ['ENST00000547809.5_1_12:105570964-105626916:-|nuORF', 'ENSG00000136044|ENST00000258530|APPL2', 'nc|ENSG00000136044|Q8NEU8-3|APPL2'] 29177 24653 FTQRKITR True PC9_epitope_Rep4 1048.6141620771198 1048.61306993586 103.32 2 -2.840308813055136 0.4720191856524686 1.0 ['ENSG00000125498|ENST00000336077|KIR2DL1', 'nc|ENSG00000125498|P43626-2|KIR2DL1', 'nc|ENSG00000243772|P43628-2|KIR2DL3', 'ENST00000415311.1_1_19:55270285-55278820:+|nuORF', 'ENSG00000243772|ENST00000342376|KIR2DL3', 'KIR3DL3|p.C387S|1|0.07|ENSG00000242019|chr19:54736023-54736023|G/C|missense_variant', 'KIR2DL1|p.C308W|1|0.15|ENSG00000125498|chr19:54783690-54783690|C/G|missense_variant', 'ENSG00000167633|ENST00000391728|KIR3DL1', 'nc|ENSG00000167633|P43629-2|KIR3DL1', 'nc|ENSG00000242019|Q8N743|KIR3DL3', 'ENSG00000242019|ENST00000291860|KIR3DL3'] 115524 22782 TRRRRFSRTV True PC9_epitope_Rep4 1333.7803329687697 1333.77922993586 95.852 2 -2.840663835565784 0.4720191856524686 1.0 ['ENSG00000145526|ENST00000382275|CDH18'] 80189 15830 PFVIMIAC True NCI_RA007_Epitope_Rep3 892.4550677951999 892.45396993586 69.898 2 -2.840731142996221 0.4720191856524686 1.0 ['C3AR1|p.S349F|1|0.18|ENSG00000171860|chr12:8059140-8059140|G/A|missense_variant'] 99381 24548 SHTSEGAH True PC9_epitope_Rep1 824.3412942708001 824.3401899358599 99.283 2 -2.8427092062860617 0.4720191856524686 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 24406 23326 FAARTVVK True NCI_RA007_Epitope_Rep3 890.5337864980999 890.53268993586 101.3 2 -2.842899672016747 0.4720191856524686 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT'] 49650 21087 KGKGSGGL True H1975_Epitope_Rep3 702.4024379753799 702.4018849679301 88.078 1 -2.8433753831268382 0.4720191856524686 1.0 ['nc|ENSG00000145730|P19021-4|PAM'] 84535 20291 QARADPVP True NCI_RA007_Epitope_Rep1 852.4453654165198 852.44426993586 83.135 2 -2.8444785024470045 0.4720191856524686 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 135326 16861 WGGRGGLM True NCI_RA007_Epitope_Rep3 832.4013924295599 832.40028993586 74.195 2 -2.845181090087739 0.4720191856524686 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 54217 21170 KVWCHGAS True PC9_epitope_Rep4 886.41195711326 886.41084993586 89.593 2 -2.8463680488639165 0.4720191856524686 1.0 ['ENST00000487854.1_1_8:139626161-139632292:-|nuORF'] 135244 22568 WFKPTVLV True NCI_RA007_Epitope_Rep5 988.5745886809199 988.57348993586 93.991 2 -2.846652500965032 0.4720191856524686 1.0 ['ENST00000399295.2_1_21:35747926-35748193:+|nuORF', 'ENST00000474455.1_1_21:35747923-35748208:+|nuORF'] 3764 25563 AGSVPHKK True PC9_epitope_Rep1 822.47118624154 822.47008993586 103.34 2 -2.8472041197508267 0.4720191856524686 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 33861 6579 GLPPPTST True H1975_Epitope_Rep3 768.4017692690401 768.40122496793 30.261 1 -2.8475566881973475 0.4720191856524686 1.0 ['ENST00000534043.1_1_1:200971202-200971469:-|nuORF'] 39602 25007 HLKTPVAIFK True H1975_Epitope_Rep2 1152.70191445236 1152.7008099358602 102.77 2 -2.847885304643369 0.4720191856524686 1.0 ['RECQL5|p.K211T|1|0.04|ENSG00000108469|chr17:75662618-75662618|T/G|missense_variant'] 122150 22797 VGAGHGAG True PC9_epitope_Rep2 624.29797290684 624.29742496793 93.177 1 -2.8484196613120476 0.4720191856524686 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 38098 23459 HAWKGYRK True PC9_epitope_Rep6 1044.5617325814399 1044.56062993586 103.34 2 -2.8494857833433307 0.4720191856524686 1.0 ['ENSG00000177239|ENST00000371589|MAN1B1'] 35506 7766 GSPKAKEAL True PC9_epitope_Rep5 899.5076313199099 899.50652993586 34.815 2 -2.850981447078617 0.4720191856524686 1.0 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 139563 23031 YLVFWAFLLVF True PC9_epitope_Rep6 1416.78458144716 1416.7834899358602 101.69 2 -2.8519967840649483 0.4720191856524686 1.0 ['ENSG00000130876|ENST00000253188|SLC7A10'] 135996 23495 WQRKKRKDPLV True NCI_RA007_Epitope_Rep3 1452.8677509908398 1452.86664993586 101.95 2 -2.852314783137487 0.4720191856524686 1.0 ['ENST00000477392.1_1_7:150130835-150139740:+|nuORF'] 124290 21225 VGTNGGLK True PC9_epitope_Rep2 744.41300265908 744.4124549679301 87.101 1 -2.8523802563573297 0.4720191856524686 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 85081 21839 QEKHEVFE True H1975_Epitope_Rep2 1044.4876241513198 1044.48652993586 90.312 2 -2.8528754643981653 0.4720191856524686 1.0 ['ENST00000498537.5_1_3:33094196-33138602:-|nuORF'] 124865 17438 VHLFEDAY True NCI_RA007_Epitope_Rep5 992.4603467743198 992.45924993586 73.859 2 -2.85343451877374 0.4720191856524686 1.0 ['ENST00000419525.5_1_2:27015485-27016144:+|nuORF', 'ENST00000472719.5_1_2:27008929-27016144:+|nuORF', 'nc|ENSG00000115163|P49450-2|CENPA', 'ENST00000475662.5_1_2:26987167-27016144:+|nuORF', 'ENSG00000115163|ENST00000335756|CENPA'] 129718 22999 VRPRPGTG True PC9_epitope_Rep1 838.47733425114 838.47622993586 93.261 2 -2.8538769204205456 0.472030779176094 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 117068 25386 TVIKWRIK True PC9_epitope_Rep3 1042.66513502082 1042.66402993586 103.07 2 -2.8556391318421497 0.472030779176094 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|1.3614331235873949|0.2056128638309657|2.73|467.0|32|2|sense'] 122173 22726 VGAIPIPT True PC9_epitope_Rep4 766.4588902223401 766.4583449679301 95.636 1 -2.8556974605377268 0.472030779176094 1.0 ['ENST00000488381.5_1_12:6764908-6765034:-|nuORF'] 95165 24707 RVGPGDPVH True PC9_epitope_Rep3 932.4828135544001 932.48170993586 100.41 2 -2.856557436009553 0.472030779176094 1.0 ['ENST00000494374.5_1_7:32997059-33028356:+|nuORF', 'ENST00000469202.5_1_7:32997059-33014827:+|nuORF'] 40933 24311 HSSPEGKEEPE True PC9_epitope_Rep2 1224.5258601348398 1224.5242049037902 99.054 3 -2.857009927206053 0.4720313624088999 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 43174 10019 IFGEAAPF True NCI_RA007_Epitope_Rep3 850.4225047136199 850.42140993586 46.501 2 -2.8575859988334167 0.4720313624088999 1.0 ['ENSG00000109061|ENST00000226207|MYH1', 'MYH1|p.T1278Qfs*18|1|0.3|ENSG00000109061|chr17:10500660-10500660|G/-|frameshift_variant', 'MYH1|p.E1318Nfs*2|1|0.26|ENSG00000109061|chr17:10499006-10499006|C/-|frameshift_variant', 'MYH1|p.E865Kfs*20|1|0.33|ENSG00000109061|chr17:10504909-10504909|T/-|frameshift_variant', 'ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.D1019Tfs*6|1|0.18|ENSG00000264424|chr17:10453208-10453208|C/-|frameshift_variant', 'MYH4|p.N665Tfs*2|1|0.48|ENSG00000264424|chr17:10455878-10455878|G/-|frameshift_variant'] 46551 20358 ITAAVLGAF True PC9_epitope_Rep5 861.4960040070499 861.49490993586 83.342 2 -2.860616143982388 0.47204845906835147 1.0 ['ENSG00000184497|ENST00000375353|TMEM255B'] 91923 23084 RKLNTRPVH True PC9_epitope_Rep4 1119.66250925187 1119.6619749679298 97.015 1 -2.8615722336084835 0.47204845906835147 1.0 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 43888 5524 IHVHRCHN True PC9_epitope_Rep5 1014.4930013986201 1014.49190993586 26.255 2 -2.861703970330324 0.47204845906835147 1.0 ['ENST00000311127.8_1_3:124686878-124687106:-|nuORF'] 124884 27013 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 110.11 2 -2.8620596278031627 0.47204845906835147 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 89162 19970 QVRGPLHLR True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.6399499358602 86.354 2 -2.862336506024807 0.47204845906835147 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 10850 13078 CVCLIVPLF True NCI_RA007_Epitope_Rep3 1005.5391317723299 1005.53802993586 58.723 2 -2.8631906212696374 0.4720649714863583 1.0 ['ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 79698 24922 PDSPAMCL True H1975_Epitope_Rep2 832.34591126904 832.3453649679301 102.44 1 -2.863555209717903 0.4720649714863583 1.0 ['ENST00000513372.5_1_4:2256680-2256926:-|nuORF'] 124944 20974 VHSHDGVV True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 87.685 2 -2.863685733294771 0.4720649714863583 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 99383 24873 SHTSEGAH True PC9_epitope_Rep5 824.3412942708001 824.3401899358599 100.83 2 -2.8642685175718543 0.47206555394543426 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 132629 24899 VVFLIVPM True PC9_epitope_Rep2 916.54559705176 916.54448993586 101.44 2 -2.8644396305595983 0.47206555394543426 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 74457 7305 NEVLHQPLSE True PC9_epitope_Rep2 1164.5775017848798 1164.57640993586 33.484 2 -2.8660923107638414 0.47208148287149976 1.0 ['ENSG00000148513|ENST00000361713|ANKRD30A'] 126817 26297 VLPSQIQHQ True H1975_Epitope_Rep3 1048.56654317836 1048.5654499358602 109.64 2 -2.867880420401735 0.47209741146544626 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 10658 24684 CPPPCSSV True NCI_RA007_Epitope_Rep1 788.3196965212001 788.31858993586 102.22 2 -2.8684461892323427 0.4720979932238728 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 132626 14883 VVFLIVPM True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 64.71 2 -2.86859483771088 0.4720979932238728 1.0 ['OR2G6|p.V211M|1|0.46|ENSG00000188558|chr1:248522277-248522277|G/A|missense_variant'] 39455 23699 HLAPGPVL True NCI_RA007_Epitope_Rep3 802.47012361238 802.46957496793 102.75 1 -2.8694934296697814 0.47211392114755124 1.0 ['ENST00000262144.10_1_16:74907771-74907879:-|nuORF'] 52413 22321 KKRFWIIE True PC9_epitope_Rep4 1118.6600496403796 1118.6589499358602 94.096 2 -2.8706530867982853 0.4721249270286048 1.0 ['ENSG00000130940|ENST00000377022|CASZ1'] 69784 23632 LVFVRKLM True NCI_RA007_Epitope_Rep3 1004.6204933275199 1004.61938993586 102.49 2 -2.87122282665788 0.4721249270286048 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000144290|Q6U841-2|SLC4A10', 'ENST00000465487.5_1_3:27418257-27433320:-|nuORF', 'nc|ENSG00000144290|Q6U841-3|SLC4A10', 'ENSG00000144290|ENST00000446997|SLC4A10', 'ENST00000446228.5_1_2:162758621-162834241:+|nuORF'] 72172 25196 MGFLLNFLRKL True PC9_epitope_Rep5 1350.7845985305 1350.7835099358601 102.06 2 -2.872932987155124 0.47214085417339907 1.0 ['ENST00000479945.1_1_3:58415887-58415938:-|nuORF'] 29896 23377 FVVLIVPM True NCI_RA007_Epitope_Rep2 916.54559705176 916.54448993586 97.811 2 -2.8772621232157265 0.4721579419184022 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 56598 10943 LDHMGCRP True PC9_epitope_Rep1 927.40549183383 927.40438993586 46.98 2 -2.877657191879037 0.4721579419184022 1.0 ['ENSG00000277399|ENST00000616987|GPR179', 'nc|ENSG00000277399|Q6PRD1|GPR179'] 98745 23541 SGGRGKIL True NCI_RA007_Epitope_Rep2 786.47118624154 786.47008993586 98.64 2 -2.8778872333269927 0.4721579419184022 1.0 ['RGS22|p.W938R|1|0.22|ENSG00000132554|chr8:99999399-99999399|A/G|missense_variant'] 10654 16423 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 68.392 2 -2.8800722732180057 0.4721579419184022 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 116443 15865 TTKSGKAP True H1975_Epitope_Rep2 788.43921740692 788.4386649679301 66.224 1 -2.8808867677383114 0.4721579419184022 1.0 ['BUD13|p.R284T|1|0.1|ENSG00000137656|chr11:116762738-116762738|C/G|missense_variant'] 131347 24314 VTGPRLSG True H1975_Epitope_Rep2 785.43955176009 785.43900496793 100.05 1 -2.881003411683679 0.47216344399854066 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 111508 27226 THYLVFWER True PC9_epitope_Rep5 1249.6243924076498 1249.6227449037901 111.52 3 -2.885675315024973 0.47220137585991245 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 99297 26606 SHRQDYLV True NCI_RA007_Epitope_Rep5 1016.5039429217999 1016.50284993586 110.0 2 -2.8862213664211804 0.47220137585991245 1.0 ['ENSG00000182793|ENST00000370989|GSTA5'] 49889 3403 KIHRMKERYEH True NCI_RA007_Epitope_Rep1 1525.7936000744098 1525.79194490379 17.136 3 -2.8876990133612264 0.47220137585991245 1.0 ['ENSG00000139597|ENST00000380130|N4BP2L1'] 68865 15510 LTMTHPHH True PC9_epitope_Rep2 972.45996993484 972.45886993586 64.933 2 -2.887876105287817 0.47220137585991245 1.0 ['CELSR3|p.A1762T|1|0.4|ENSG00000008300|chr3:48653783-48653783|C/T|missense_variant'] 69607 23073 LVDMAKKL True PC9_epitope_Rep4 916.54157430048 916.54046993586 96.972 2 -2.888176303231275 0.47220137585991245 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 124036 15676 VGSGRYDT True PC9_epitope_Rep1 853.39299549049 853.39244496793 65.119 1 -2.8887103344614062 0.4722068771432443 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1'] 69748 24196 LVFKAKKRK True PC9_epitope_Rep1 1116.74953335112 1116.74842993586 97.885 2 -2.892214227603962 0.4722123783118968 1.0 ['ENST00000306376.9_1_3:185765504-185765672:-|nuORF'] 110794 20390 TGISVRKR True PC9_epitope_Rep6 915.5613982282699 915.56030993586 91.128 2 -2.8931314485364807 0.472228881129814 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 117150 4907 TVLARHAH True PC9_epitope_Rep2 903.5038833521501 903.50278993586 24.241 2 -2.8932947191980776 0.472228881129814 1.0 ['nc|ENSG00000172367|Q86UT5-3|NHERF4', 'ENSG00000172367|ENST00000355547|NHERF4', 'nc|ENSG00000172367|Q86UT5|NHERF4', 'PDZD3|p.R481Dfs*16|1|0.11|ENSG00000172367|chr11:119188822-119188822|C/-|frameshift_variant', 'nc|ENSG00000172367|Q86UT5-5|NHERF4', 'nc|ENSG00000172367|Q86UT5-4|NHERF4'] 78110 25022 NWGGLGLL True PC9_epitope_Rep1 828.4493881678 828.44828993586 101.17 2 -2.8941101355531567 0.472228881129814 1.0 ['ENST00000238379.9_1_9:116136341-116136734:-|nuORF'] 91539 23514 RIGQGAAF True NCI_RA007_Epitope_Rep4 818.4398861132598 818.43878993586 102.03 2 -2.8987733285942103 0.4722575400712842 1.0 ['nc|ENSG00000188013|A8K0S8|MEIS3P2'] 14026 20035 DRIEELEEALR True H1975_Epitope_Rep3 1371.6994078227099 1371.6983099358602 83.854 2 -2.8995215117033233 0.4722575400712842 1.0 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'ERC1-VWF|2|fusion', 'ERC1-VWF|1|fusion'] 23622 19115 EWPPSWRRWWQ True NCI_RA007_Epitope_Rep2 1612.7687652255597 1612.76766993586 79.214 2 -2.8997035327327194 0.4722575400712842 1.0 ['ENST00000514213.6_3_4:76649793-76649898:+|nuORF'] 86394 25551 QKFLRKFV True PC9_epitope_Rep3 1064.6494849566798 1064.6483899358602 103.77 2 -2.9013259060591086 0.4722575400712842 1.0 ['ENSG00000203740|ENST00000439373|NTMT2'] 48796 22578 KDNPAFAF True H1975_Epitope_Rep1 908.43921740692 908.43812993586 93.905 2 -2.904050254091324 0.4722575400712842 1.0 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1'] 39565 24797 HLGQLAKG True PC9_epitope_Rep4 822.47118624154 822.47008993586 103.88 2 -2.9042201000206243 0.4722575400712842 1.0 ['ENSG00000143127|ENST00000369304|ITGA10', 'nc|ENSG00000143127|O75578-3|ITGA10'] 62973 25702 LLPKKPTA True PC9_epitope_Rep1 866.5589386167799 866.5583949679301 103.9 1 -2.904362347748949 0.4722575400712842 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 93131 23425 RPPGGGGG True PC9_epitope_Rep2 653.32452200785 653.3239749679301 95.577 1 -2.904478014139982 0.4722575400712842 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 48794 7806 KDMSTERDFFM True H1975_Epitope_Rep2 1405.60062238157 1405.5995299358601 34.974 2 -2.9047494907452642 0.4722575400712842 1.0 ['EPAS1|p.A684Qfs*12|1|0.11|ENSG00000116016|chr2:46381600-46381600|G/-|frameshift_variant', 'ENSG00000116016|ENST00000263734|EPAS1'] 122697 20944 VGGGHGGP True PC9_epitope_Rep2 636.29797290684 636.29742496793 86.009 1 -2.905546694638249 0.47225811830422276 1.0 ['ENST00000306917.4_1_15:68570649-68570838:+|nuORF'] 121135 20328 VERRWWRRRLW True PC9_epitope_Rep2 1697.9491296293697 1697.9480299358602 83.614 2 -2.906228805885677 0.47225811830422276 1.0 ['ENST00000284971.7_1_21:27102007-27107256:-|nuORF'] 126761 25561 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 103.62 3 -2.9081040192462897 0.4722636180789312 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 85082 23182 QEKLDAFF True H1975_Epitope_Rep1 996.4916469025999 996.49054993586 96.373 2 -2.9085781961589428 0.4722691177390108 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4', 'NLRP4|p.E797Nfs*16|1|0.56|ENSG00000160505|chr19:55870861-55870861|G/-|frameshift_variant'] 127436 25609 VNGLKITT True PC9_epitope_Rep3 844.5018176634801 844.50072993586 104.0 2 -2.9105535861126115 0.47228503840181746 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.W1179Cfs*25|1|0.06|ENSG00000003393|chr2:201723411-201723423|ATCTTGCCACATT/-|frameshift_variant', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 45071 12954 IPIMAFAF True NCI_RA007_Epitope_Rep4 908.4829967951999 908.48188993586 56.92 2 -2.9114584414374645 0.4722856160315128 1.0 ['ENSG00000188338|ENST00000614032|SLC38A3'] 126764 26923 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 110.01 3 -2.9118160135815216 0.4722856160315128 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 99380 22065 SHTSEGAH True H1975_Epitope_Rep3 824.3412942708001 824.3401899358599 92.271 2 -2.917470879220058 0.47236463673877704 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 136875 2690 YAEDLERVF True PC9_epitope_Rep5 1140.54513902744 1140.54349490379 14.85 3 -2.9178605095968413 0.47236463673877704 1.0 ['ENSG00000165704|ENST00000298556|HPRT1'] 112250 13537 TKRALPNN True NCI_RA007_Epitope_Rep3 912.51411368268 912.5130099358599 60.538 2 -2.9189106362630604 0.47236463673877704 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.L350Gfs*30|1|0.32|ENSG00000141510|chr17:7670657-7670661|TTGAG/-|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.F341Efs*7|1|0.2|ENSG00000141510|chr17:7670688-7670689|-/CTTC|frameshift_variant', 'TP53|p.E339Rfs*6|1|0.3|ENSG00000141510|chr17:7670694-7670694|C/-|frameshift_variant', 'TP53|p.R333Vfs*12|1|0.54|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant', 'TP53|p.S313Afs*32|1|0.38|ENSG00000141510|chr17:7673592-7673592|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'nc|ENSG00000141510|P04637-9|TP53'] 3149 19791 AGDGGGSG True PC9_epitope_Rep2 576.21396849936 576.2134249679301 81.515 1 -2.9191907961416317 0.4723909758766217 1.0 ['ENST00000533031.5_1_8:144776729-144776963:+|nuORF'] 12095 4931 DHWYETDPR True PC9_epitope_Rep6 1217.51015050105 1217.50904993586 26.533 2 -2.9192161768945035 0.4723932772759005 1.0 ['nc|ENSG00000152154|Q8NBL3-2|TMEM178A', 'ENSG00000152154|ENST00000281961|TMEM178A'] 63424 26404 LLVPTEQR True PC9_epitope_Rep3 954.54983048506 954.54872993586 107.88 2 -2.920238923782877 0.4723932772759005 1.0 ['ENSG00000283703|ENST00000686984|VSIG10L2'] 48650 19321 KARSCGEV True NCI_RA007_Epitope_Rep5 848.4174364165199 848.41632993586 81.194 2 -2.923303603917325 0.4723932772759005 1.0 ['ENSG00000183098|ENST00000377047|GPC6', 'GPC6|p.V203*|1|0.25|ENSG00000183098|chr13:93830439-93830451|ACGTGCCCCGGAA/-|frameshift_variant'] 129797 24864 VRRLKVNE True PC9_epitope_Rep2 1012.6141620771199 1012.61306993586 101.32 2 -2.923610879494528 0.4723932772759005 1.0 ['nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'HNRNPUL1|p.L363Ffs*44|1|0.14|ENSG00000105323|chr19:41292331-41292332|-/T|frameshift_variant'] 72703 24680 MMMMMMMI True H1975_Epitope_Rep2 1048.37802305176 1048.37692993586 101.49 2 -2.923932336059587 0.4723932772759005 1.0 ['ENST00000429734.1_1_10:97949420-97949504:-|nuORF'] 38684 16277 HFYRRYFWLVV True NCI_RA007_Epitope_Rep2 1584.8353882334 1584.8342899358602 68.043 2 -2.924069088825885 0.4723932772759005 1.0 ['ENSG00000188582|ENST00000340634|PAQR9'] 81014 16836 PILMVFCA True H1975_Epitope_Rep3 892.4550677952 892.45396993586 70.311 2 -2.9242610590644658 0.4723932772759005 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 136222 22214 WRSRLGRVMY True PC9_epitope_Rep6 1322.7029941648598 1322.7018899358602 98.403 2 -2.9257740828241547 0.4723932772759005 1.0 ['ENSG00000171853|ENST00000324266|TRAPPC12', 'ENST00000462983.5_1_2:3447569-3464471:+|nuORF', 'ENST00000479897.5_1_2:3447569-3469487:+|nuORF', 'ENST00000469147.5_1_2:3428415-3471239:+|nuORF'] 100379 15463 SKTSGKAK True NCI_RA007_Epitope_Rep4 805.4657665079299 805.46466993586 67.144 2 -2.9277505175726164 0.4724097691089439 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 91538 23526 RIGQGAAF True NCI_RA007_Epitope_Rep3 818.4398861132598 818.43878993586 102.07 2 -2.927988312128479 0.4724097691089439 1.0 ['nc|ENSG00000188013|A8K0S8|MEIS3P2'] 135327 17018 WGGRGGLM True NCI_RA007_Epitope_Rep4 832.4013924295599 832.40028993586 73.742 2 -2.9280088706237413 0.4724097691089439 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 33360 25726 GKVKAPLL True NCI_RA007_Epitope_Rep1 824.5483739330799 824.54726993586 106.47 2 -2.9301564044026454 0.4724361044833658 1.0 ['ENSG00000131944|ENST00000588258|FAAP24'] 81677 22873 PLLRKRWFQL True PC9_epitope_Rep4 1355.8190098932698 1355.81737490379 96.199 3 -2.9325659725311084 0.47243667885683327 1.0 ['SPDYE5|p.M345*|1|0.09|ENSG00000170092|chr7:75501637-75501637|C/-|frameshift_variant', 'ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000260097|ENST00000563237|SPDYE6'] 139663 20901 YMVVYLVI True NCI_RA007_Epitope_Rep4 998.5510763550197 998.54996993586 90.583 2 -2.9331663770506764 0.47243667885683327 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 62974 25505 LLPKKPTA True PC9_epitope_Rep2 866.5589386167799 866.5583949679301 103.79 1 -2.934833502057039 0.4724421754532194 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 133214 24965 VVSGHAARATP True PC9_epitope_Rep2 1064.57269118796 1064.5715899358602 101.69 2 -2.93789525841164 0.47246416069344893 1.0 ['SIRPA|p.P156H|1|0.16|ENSG00000198053|chr20:1921425-1921425|C/A|missense_variant'] 84536 19840 QARADPVP True NCI_RA007_Epitope_Rep5 852.4453654165198 852.44426993586 83.225 2 -2.938241230396606 0.47246416069344893 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 37231 23596 GVRGSGSG True PC9_epitope_Rep1 675.33000131111 675.32945496793 95.55 1 -2.938359937088459 0.47246416069344893 1.0 ['ENST00000436944.5_1_7:73098152-73100976:+|nuORF'] 68231 19240 LTEAHKWR True PC9_epitope_Rep5 1039.5563128478298 1039.5552099358601 79.045 2 -2.940347515562018 0.47246416069344893 1.0 ['nc|ENSG00000146112|Q6NYC8-2|PPP1R18', 'ENSG00000146112|ENST00000274853|PPP1R18'] 29981 21373 FWRFLFLHK True PC9_epitope_Rep6 1292.7182332228397 1292.7171299358602 95.086 2 -2.94437400956595 0.47248007501172057 1.0 ['ENST00000519948.3_1_12:74934905-74935118:+|nuORF'] 12542 14134 DKLSLPHKK True PC9_epitope_Rep5 1064.63422881536 1064.63312993586 59.378 2 -2.944651359035524 0.47248122180666535 1.0 ['ENST00000400198.7_2_13:107209448-107211901:-|nuORF'] 62975 24778 LLPKKPTA True PC9_epitope_Rep4 866.5589386167799 866.5583949679301 103.81 1 -2.945332082429937 0.47248122180666535 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 135493 23684 WIPFIYRGVRV True PC9_epitope_Rep2 1404.80302547596 1404.80137490379 96.573 3 -2.945640225691942 0.47248122180666535 1.0 ['ENSG00000104356|ENST00000401707|POP1'] 92705 19450 RNRYENVIIP True PC9_epitope_Rep4 1272.6938689498 1272.69276993586 82.93 2 -2.945767713960405 0.47248122180666535 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 3763 23926 AGSVPHKK True NCI_RA007_Epitope_Rep4 822.47118624154 822.47008993586 103.76 2 -2.948253785838346 0.4724823685060369 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 38827 24594 HHAYQHPQ True H1975_Epitope_Rep3 1016.45766143572 1016.45656993586 102.34 2 -2.949395448945735 0.4724823685060369 1.0 ['ENST00000341853.5_1_15:100332473-100332959:-|nuORF'] 61446 26730 LIWTEPKY True NCI_RA007_Epitope_Rep5 1048.5593325395998 1048.55822993586 110.54 2 -2.9495048348326676 0.4724823685060369 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 92035 25354 RKRWFVLRRG True PC9_epitope_Rep5 1372.8316402656396 1372.83107496793 102.73 1 -2.9503336278421197 0.4724823685060369 1.0 ['GAB3|p.A522Qfs*6|1|0.12|ENSG00000160219|chrX:154680201-154680213|CCACGTAAGGGCA/-|frameshift_variant', 'nc|ENSG00000160219|Q8WWW8-3|GAB3', 'nc|ENSG00000160219|Q8WWW8|GAB3', 'ENSG00000160219|ENST00000424127|GAB3', 'GAB3|p.R37S|1|0.12|ENSG00000160219|chrX:154716293-154716293|G/T|missense_variant', 'ENST00000496390.5_1_X:153928333-153979808:-|nuORF'] 97152 6263 SDRWGWSD True PC9_epitope_Rep5 1007.4097081837899 1007.40860993586 29.068 2 -2.9506204073946907 0.4724829418198864 1.0 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-3|TECPR1', 'TECPR1|p.E119Sfs*78|1|0.26|ENSG00000205356|chr7:98244938-98244938|C/-|frameshift_variant'] 130943 10966 VTDKKIAI True NCI_RA007_Epitope_Rep4 886.5487678558999 886.54766993586 49.048 2 -2.951282226081771 0.4724829418198864 1.0 ['nc|ENSG00000109814|O60701-2|UGDH', 'ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH'] 84538 23843 QARADPVP True PC9_epitope_Rep5 852.4453654165198 852.44426993586 96.693 2 -2.9520248587589677 0.4724939321020449 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 126763 26359 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 107.25 3 -2.952619632678113 0.4724939321020449 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 5546 24025 AMLLECRW True NCI_RA007_Epitope_Rep5 1020.4884931818 1020.48738993586 99.806 2 -2.952968485077424 0.4724994270713973 1.0 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4'] 10552 23444 CLVVVPVS True PC9_epitope_Rep2 814.4622613506199 814.46116993586 95.649 2 -2.9534965975045417 0.4725049219262701 1.0 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 79743 21840 PEAAGARQSPS True PC9_epitope_Rep5 1069.51523588149 1069.51467496793 89.042 1 -2.9572028075126293 0.47252083333333333 1.0 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 37240 22199 GVRIKRTS True PC9_epitope_Rep2 915.5613982282699 915.56084496793 90.871 1 -2.9589519581177997 0.4725367444089124 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 52561 22725 KLGKAACY True PC9_epitope_Rep6 852.4527592960799 852.45166993586 100.49 2 -2.9614668378008084 0.47256307160267497 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336438-220336879:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 84109 23170 PWRLYKWG True PC9_epitope_Rep6 1104.58688470012 1104.58578993586 102.22 2 -2.962119434034923 0.4725636431815341 1.0 ['ENST00000428865.2_1_6:74404306-74404579:-|nuORF'] 80636 2890 PGSEHIEML True H1975_Epitope_Rep3 1011.46953155903 1011.46842993586 15.351 2 -2.9621983557345146 0.4725636431815341 1.0 ['ENST00000565460.1_1_16:68289553-68293557:+|nuORF', 'nc|ENSG00000103066|Q8NCC3-2|PLA2G15', 'ENSG00000103066|ENST00000219345|PLA2G15'] 86898 16857 QLSDGKKFK True PC9_epitope_Rep2 1049.5869442697701 1049.58584993586 70.088 2 -2.9624799148009835 0.47256421473657895 1.0 ['nc|ENSG00000176834|Q8N0Z9-2|VSIG10', 'ENSG00000176834|ENST00000359236|VSIG10'] 34113 23038 GMEVGRWI True PC9_epitope_Rep6 946.4694719893798 946.46836993586 101.71 2 -2.962615084662445 0.47256421473657895 1.0 ['ENST00000521719.5_1_8:124526414-124553254:-|nuORF'] 54362 24360 KYFAHIIK True NCI_RA007_Epitope_Rep5 1018.5963867546599 1018.59528993586 101.17 2 -2.9633126916577295 0.47256970845875823 1.0 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2'] 3762 23834 AGSVPHKK True NCI_RA007_Epitope_Rep3 822.47118624154 822.47008993586 103.27 2 -2.9672268083490945 0.4725960336638613 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 135479 14169 WIFYRKLFFFF True NCI_RA007_Epitope_Rep1 1612.8594777229193 1612.85838993586 59.15 2 -2.969291099072346 0.47259660452036245 1.0 ['ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 84515 16424 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 69.929 2 -2.9696589579854566 0.47259660452036245 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 85488 26055 QFPKNYIFFS True NCI_RA007_Epitope_Rep4 1289.6444591458896 1289.64280490379 114.25 3 -2.9722155988804118 0.4726026683886557 1.0 ['ENST00000420886.6_1_12:123780337-123780400:-|nuORF'] 75534 23350 NKVNPIFHH True PC9_epitope_Rep6 1104.58286194884 1104.5817699358602 102.92 2 -2.9729251990902905 0.4726026683886557 1.0 ['ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3'] 53042 24949 KPLRWHDALLL True PC9_epitope_Rep3 1360.79794009552 1360.79684993586 101.32 2 -2.973124144071479 0.4726026683886557 1.0 ['ENSG00000011028|ENST00000303375|MRC2'] 124945 25062 VHSHDGVV True PC9_epitope_Rep4 848.41406528824 848.41296993586 104.96 2 -2.97621242683627 0.4726191468088652 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 49888 24145 KIHLTENGIRV True PC9_epitope_Rep5 1278.74081914222 1278.7397299358602 97.861 2 -2.9773276499299466 0.4726191468088652 1.0 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 128023 12432 VPKAQGGP True PC9_epitope_Rep2 752.4180880395198 752.41698993586 53.126 2 -2.97747722759932 0.4726191468088652 1.0 ['ENST00000515795.1_7:286228-299943:+|nuORF'] 10533 19996 CLIHEAFT True NCI_RA007_Epitope_Rep5 932.4425885352 932.44148993586 83.831 2 -2.9819721263054473 0.4726564534102626 1.0 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A'] 53764 15397 KSTTKAAK True NCI_RA007_Epitope_Rep4 833.4970666362099 833.49596993586 66.898 2 -2.9825652220302756 0.4726564534102626 1.0 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-3|PTPN22'] 124237 5463 VGTGKVACS True PC9_epitope_Rep2 820.41128840692 820.41018993586 26.408 2 -2.9830412744316805 0.4726564534102626 1.0 ['ENST00000451982.6_2_3:195408438-195423327:+|nuORF'] 82813 23052 PRRRRRREER True PC9_epitope_Rep4 1465.85629187369 1465.8551899358602 96.891 2 -2.9863601030383116 0.4726593008362057 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 91107 25524 RFRLLHLRS True PC9_epitope_Rep3 1196.7254438615998 1196.72487496793 103.65 1 -2.986723611279375 0.4726593008362057 1.0 ['ENSG00000048342|ENST00000424120|CC2D2A', 'nc|ENSG00000048342|Q9P2K1-2|CC2D2A'] 52886 23547 KPGAVAHA True NCI_RA007_Epitope_Rep5 749.4184223926899 749.41732993586 97.887 2 -2.98760951009854 0.4726593008362057 1.0 ['ENST00000487643.1_1_3:183240843-183262455:-|nuORF'] 32852 12291 GHPGGWGA True PC9_epitope_Rep3 737.32452200785 737.3239749679301 52.304 1 -2.987780395970938 0.4726593008362057 1.0 ['POU3F3|p.W453Cfs*12|1|0.11|ENSG00000198914|chr2:104856868-104856868|G/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3'] 91666 23719 RIVELFVN True NCI_RA007_Epitope_Rep4 988.5705659296399 988.56946993586 102.85 2 -2.9882514408049667 0.4726593008362057 1.0 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103590092-103612100:-|nuORF'] 95046 17209 RTSRISFV True NCI_RA007_Epitope_Rep4 964.5454138109599 964.54430993586 74.506 2 -2.9882990372602856 0.4726593008362057 1.0 ['ENST00000597953.1_1_3:142719968-142720172:-|nuORF'] 4659 10359 ALAGRRVP True PC9_epitope_Rep2 838.5137197598599 838.51262993586 45.172 2 -2.989292715283105 0.4726593008362057 1.0 ['ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF'] 61631 19661 LKPKVRKERD True NCI_RA007_Epitope_Rep5 1267.77245362367 1267.7713499358601 82.539 2 -2.9900918351801318 0.4726593008362057 1.0 ['ENSG00000155754|ENST00000439140|C2CD6'] 71131 20456 LYLPSFFTY True NCI_RA007_Epitope_Rep4 1149.57464825057 1149.57354993586 88.587 2 -2.9915415511400614 0.4726593008362057 1.0 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 86572 5523 QLEASPIAP True PC9_epitope_Rep2 924.4916469025999 924.49054993586 26.633 2 -2.992166997747312 0.4726593008362057 1.0 ['LTR8_dup2971|chr17:8380695-8381392:+|3.100241796106028|0.2447948664736123|3.66|541.0|4|1|sense'] 87076 3262 QNKLLIIKK True PC9_epitope_Rep2 1096.73321458064 1096.73210993586 17.799 2 -2.994703227964134 0.4726595035815426 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026'] 80236 9105 PGAPGGKG True PC9_epitope_Rep1 639.33402406239 639.3334749679301 39.874 1 -2.99472129697961 0.4726595035815426 1.0 ['nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1', 'ENSG00000081052|ENST00000396625|COL4A4'] 72104 22864 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 95.163 2 -2.995215796812527 0.4726595035815426 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 86827 6526 QLQEEYTRYLF True H1975_Epitope_Rep1 1488.72489429456 1488.7232549037901 30.16 3 -2.995326568577569 0.4726595035815426 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'FARP2|p.C654Lfs*26|1|0.39|ENSG00000006607|chr2:241468207-241468207|G/-|frameshift_variant', 'nc|ENSG00000006607|O94887-3|FARP2', 'nc|ENSG00000006607|O94887-2|FARP2'] 4660 16652 ALAHKTLK True PC9_epitope_Rep1 880.54943656224 880.54832993586 68.882 2 -2.995425898768687 0.4726595035815426 1.0 ['ENSG00000187527|ENST00000342358|ATP13A5'] 124272 14339 VGTLGTHT True NCI_RA007_Epitope_Rep3 784.4079172786402 784.4073649679301 63.718 1 -2.996250135595448 0.4726595035815426 1.0 ['ENSG00000166250|ENST00000448775|CLMP', 'CLMP|p.Y13N|1|0.46|ENSG00000166250|chr11:123097944-123097944|A/T|missense_variant'] 110752 14085 TGGGGKAK True NCI_RA007_Epitope_Rep2 674.3711378470999 674.3705849679301 59.449 1 -2.997003324896503 0.4726595035815426 1.0 ['ENST00000443451.6_1_12:124809950-124819187:-|nuORF'] 59499 10059 LFRHSRAP True PC9_epitope_Rep2 982.5460825172999 982.54498993586 44.021 2 -2.997056516822078 0.4726595035815426 1.0 ['ENST00000601673.1_7:6523004-6523760:+|nuORF'] 124887 26881 VHMPEGLF True PC9_epitope_Rep5 928.4476739156399 928.44656993586 109.81 2 -2.9976535408786957 0.4726595035815426 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 8747 23507 AVDAPWAH True H1975_Epitope_Rep1 865.4082516318099 865.40770496793 97.668 1 -2.99882393273346 0.4726595035815426 1.0 ['ENST00000337414.8_1_X:11683256-11683592:-|nuORF'] 93953 24541 RRHPKPFR True PC9_epitope_Rep4 1092.6417142376397 1092.64060993586 102.88 2 -3.0009650521764875 0.4726595035815426 1.0 ['ENSG00000175699|ENST00000636493|CCDC197'] 23631 15148 EWRWKYEEERR True NCI_RA007_Epitope_Rep2 1665.8011875526497 1665.8000899358601 63.613 2 -3.001270284211867 0.4726595035815426 1.0 ['ENSG00000198483|ENST00000355594|ANKRD35'] 93638 28758 RQQRTQAHL True PC9_epitope_Rep1 1136.6162873354397 1136.6151899358601 119.47 2 -3.001871553040058 0.4726595035815426 1.0 ['ENSG00000188959|ENST00000400613|C9orf152'] 32732 10261 GHAAAGGL True NCI_RA007_Epitope_Rep4 652.3292730351201 652.32872496793 46.324 1 -3.0023074602286353 0.4726595035815426 1.0 ['ENST00000375150.6_1_6:32116492-32119883:-|nuORF', 'ENST00000495191.5_1_6:32116492-32118763:-|nuORF', 'ENST00000211413.9_1_6:32116492-32119704:-|nuORF'] 105418 10906 SRSRYYRQRQR True H1975_Epitope_Rep3 1554.8239886858998 1554.82288993586 47.037 2 -3.004878897057928 0.4726595035815426 1.0 ['ENSG00000175646|ENST00000312511|PRM1'] 57161 16529 LDTSGKNL True NCI_RA007_Epitope_Rep5 846.44469671018 846.44414496793 70.34 1 -3.0064829903921804 0.4726595035815426 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'nc|ENSG00000204352|Q5T035|FAM120A2P'] 123232 23710 VGLGHPPT True NCI_RA007_Epitope_Rep2 776.4180880395201 776.41753496793 99.495 1 -3.006542084099716 0.4726595035815426 1.0 ['ENST00000325327.3_1_19:2429436-2429694:-|nuORF'] 99948 17486 SINQLTAA True NCI_RA007_Epitope_Rep4 816.4341320264799 816.43302993586 75.705 2 -3.008407896829508 0.4726595035815426 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 18572 26101 EKPRPLHALA True PC9_epitope_Rep1 1130.6560268891 1130.65492993586 105.66 2 -3.0114428250829928 0.4726595035815426 1.0 ['ENST00000557803.5_1_14:102802004-102808513:+|nuORF', 'nc|ENSG00000022976|A8K0R7|ZNF839', 'nc|ENSG00000022976|A8K0R7-2|ZNF839', 'ENSG00000022976|ENST00000442396|ZNF839'] 94244 16405 RRQKRLFCRYH True H1975_Epitope_Rep1 1561.85245236321 1561.85134993586 68.463 2 -3.012600138131088 0.47268089536699637 1.0 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 90885 25072 REVSSFVFF True PC9_epitope_Rep2 1116.56039516876 1116.55928993586 102.11 2 -3.0167604387716183 0.47268089536699637 1.0 ['nc|ENSG00000155085|Q5TCS8-5|AK9'] 89999 13510 RDLYAFYPLL True NCI_RA007_Epitope_Rep3 1269.6757592741699 1269.67466993586 60.43 2 -3.0174562566108616 0.4726820330230912 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant'] 58033 12508 LEHYKQEV True PC9_epitope_Rep2 1044.5240096600398 1044.52290993586 53.421 2 -3.018152496008701 0.4726820330230912 1.0 ['ENST00000566201.6_1_16:46508202-46534771:-|nuORF'] 77227 8237 NRVLYQTRGQ True PC9_epitope_Rep2 1233.65781779425 1233.65672993586 37.041 2 -3.0186035585810296 0.4726820330230912 1.0 ['ENSG00000168255|ENST00000513506|POLR2J3', 'ENSG00000267368|ENST00000340457|UPK3BL1'] 124883 26889 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 109.45 2 -3.0191548571607685 0.4726820330230912 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 131999 6916 VTSNSKPV True PC9_epitope_Rep2 830.44978209062 830.44868993586 32.004 2 -3.0195417126332837 0.4726875227734111 1.0 ['ENSG00000275004|ENST00000626650|ZNF280B', 'ZNF280B|p.Q132Kfs*14|1|0.23|ENSG00000275004|chr22:22489005-22489005|G/-|frameshift_variant'] 93551 24605 RQLLAHFH True H1975_Epitope_Rep1 1020.5617325814399 1020.56062993586 101.95 2 -3.020538965243002 0.47269358096150244 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 53617 7562 KRTRNENIF True PC9_epitope_Rep5 1176.63635407368 1176.63469490379 34.036 3 -3.021351781217644 0.47269358096150244 1.0 ['ENSG00000152463|ENST00000378228|OLAH', 'nc|ENSG00000152463|Q9NV23-2|OLAH'] 139669 12159 YMYILPYKEFF True NCI_RA007_Epitope_Rep3 1512.7363109253995 1512.7352099358602 54.947 2 -3.023141029988571 0.47269358096150244 1.0 ['ENSG00000118276|ENST00000306851|B4GALT6', 'nc|ENSG00000118276|Q9UBX8-2|B4GALT6', 'ENST00000578114.1_1_18:29206329-29238028:-|nuORF'] 66333 7224 LSGAAKQP True PC9_epitope_Rep2 770.42865272322 770.42754993586 33.177 2 -3.0248468239441384 0.4726941494899021 1.0 ['nc|ENSG00000164616|Q9UKT6|FBXL21P'] 39462 16730 HLCKKKMR True NCI_RA007_Epitope_Rep5 1042.5892102825799 1042.58810993586 71.115 2 -3.024987171640732 0.4726941494899021 1.0 ['nc|ENSG00000133107|Q9UBN4-5|TRPC4', 'nc|ENSG00000133107|Q9UBN4-3|TRPC4', 'nc|ENSG00000133107|Q9UBN4-2|TRPC4', 'ENSG00000133107|ENST00000379705|TRPC4', 'ENST00000426868.6_1_13:38213370-38229407:-|nuORF', 'nc|ENSG00000133107|Q9UBN4-6|TRPC4'] 10657 24884 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 102.29 2 -3.0262932249571945 0.47270512793820657 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 112303 18164 TKTRLQIQ True NCI_RA007_Epitope_Rep1 986.58727862294 986.58618993586 74.799 2 -3.026564619358726 0.47270512793820657 1.0 ['ENSG00000174032|ENST00000519676|SLC25A30'] 79283 22950 PAPRMPLP True PC9_epitope_Rep2 877.4843937775299 877.48328993586 93.77 2 -3.0302424821946694 0.4727161059293804 1.0 ['ENSG00000113615|ENST00000398844|SEC24A', 'SEC24A|p.Q114H|1|0.13|ENSG00000113615|chr5:134661363-134661363|G/T|missense_variant', 'nc|ENSG00000113615|O95486-2|SEC24A'] 79475 20228 PAWRLPPRPW True NCI_RA007_Epitope_Rep2 1274.7036457878598 1274.70199490379 83.713 3 -3.0303171740926014 0.4727161059293804 1.0 ['ENST00000330915.7_1_19:8399689-8399767:-|nuORF'] 34615 3205 GPWPLAAY True PC9_epitope_Rep1 873.4384891309298 873.43738993586 17.209 2 -3.0315482258731463 0.47271667395332373 1.0 ['ENST00000512335.5_1_5:1633012-1634075:-|nuORF'] 117855 14266 TVYKSRDP True PC9_epitope_Rep2 964.4977949121999 964.49668993586 60.141 2 -3.0318663604012097 0.47271667395332373 1.0 ['CDK4|p.A23S|1|0.36|ENSG00000135446|chr12:57751651-57751651|C/A|missense_variant'] 32378 5649 GFLPEDTHA True PC9_epitope_Rep2 985.45051036661 985.44940993586 27.114 2 -3.0327450137906244 0.47273257205908376 1.0 ['ENST00000550375.1_1_14:105714044-105714245:-|nuORF'] 114101 25516 TPGAKKGP True PC9_epitope_Rep2 754.4337381036598 754.43264993586 103.83 2 -3.0354298751058257 0.47275944623711874 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66', 'nc|ENSG00000166436|O15016-2|TRIM66'] 84537 23901 QARADPVP True PC9_epitope_Rep1 852.4453654165198 852.44426993586 96.737 2 -3.0356628534474885 0.47275944623711874 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 135892 21831 WPLLNLWNLRF True PC9_epitope_Rep6 1470.81359015966 1470.8124899358602 96.874 2 -3.036311860457052 0.47275944623711874 1.0 ['nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 96865 17398 SASQNGQDTIR True PC9_epitope_Rep5 1175.55307794219 1175.55198993586 71.922 2 -3.0405558120672267 0.4727929390703387 1.0 ['FLG|p.D836N|1|0.06|ENSG00000143631|chr1:152312380-152312380|C/T|missense_variant'] 27739 24415 FPRRRRRR True NCI_RA007_Epitope_Rep3 1198.7384085871397 1198.7373099358601 105.67 2 -3.040924878895382 0.4727929390703387 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 136742 25185 WYKNGRMITE True PC9_epitope_Rep3 1296.6284918119197 1296.62738993586 102.24 2 -3.041520103599833 0.4727929390703387 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.Q4382Vfs*9|1|0.16|ENSG00000143341|chr1:186130610-186130611|CC/-|frameshift_variant', 'HMCN1|p.G4565Wfs*17|1|0.23|ENSG00000143341|chr1:186137606-186137607|-/T|frameshift_variant', 'HMCN1|p.E4024Rfs*6|1|0.46|ENSG00000143341|chr1:186119852-186119853|-/A|frameshift_variant', 'HMCN1|p.H3388Qfs*14|1|0.24|ENSG00000143341|chr1:186093637-186093637|T/-|frameshift_variant'] 122468 9918 VGEESTHP True PC9_epitope_Rep2 854.37701107318 854.37590993586 43.482 2 -3.0428225970304132 0.4727929390703387 1.0 ['ENSG00000166225|ENST00000549921|FRS2'] 10204 7402 CARDLEATV True NCI_RA007_Epitope_Rep2 976.46478053176 976.46368993586 33.417 2 -3.043681753907606 0.4727929390703387 1.0 ['ENST00000375608.7_2_13:113548693-113669133:+|nuORF'] 93552 24802 RQLLAHFH True H1975_Epitope_Rep2 1020.5617325814399 1020.56062993586 101.96 2 -3.0439676492115177 0.4727929390703387 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 126816 25577 VLPSQIQHQ True H1975_Epitope_Rep3 1048.56654317836 1048.5654499358602 106.43 2 -3.04466071052907 0.4727929390703387 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 124885 26090 VHMPEGLF True PC9_epitope_Rep3 928.4476739156399 928.44656993586 106.29 2 -3.0447825606304715 0.4727929390703387 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 124881 26421 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 107.19 2 -3.053300882881582 0.4728296506000271 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 124882 26587 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 108.0 2 -3.056193982664889 0.4728510319417991 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 25848 24985 FFFLFPRRRRR True PC9_epitope_Rep3 1596.9266032796397 1596.9255099358602 101.45 2 -3.056959017937379 0.4728510319417991 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 90840 23396 RETQNGYYVK True NCI_RA007_Epitope_Rep4 1256.6149499227597 1256.6138499358601 101.56 2 -3.0594306430497107 0.4728576483566805 1.0 ['nc|ENSG00000118257|O60462-4|NRP2', 'nc|ENSG00000118257|O60462-5|NRP2', 'nc|ENSG00000118257|O60462-2|NRP2', 'ENSG00000118257|ENST00000357785|NRP2', 'nc|ENSG00000118257|O60462|NRP2', 'nc|ENSG00000118257|O60462-6|NRP2'] 54187 24824 KVTWRRQQHL True PC9_epitope_Rep2 1350.7632859223 1350.76218993586 101.18 2 -3.059870510934627 0.4728576483566805 1.0 ['RHNO1|p.R216Q|1|0.13|ENSG00000171792|chr12:2888389-2888389|G/A|missense_variant'] 128896 24799 VQFKEELL True H1975_Epitope_Rep2 1004.5542471591598 1004.55314993586 101.95 2 -3.060278506492728 0.4728576483566805 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'nc|ENSG00000160218|P48553-2|TRAPPC10'] 41761 16298 IAPERKEEKN True PC9_epitope_Rep2 1212.6462500510397 1212.64459490379 67.935 3 -3.06045326053394 0.4728576483566805 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1'] 83864 20042 PVPAEHRAP True PC9_epitope_Rep2 972.51411368268 972.5130099358599 82.496 2 -3.060574951944881 0.4728576483566805 1.0 ['ENSG00000102781|ENST00000380615|KATNAL1'] 4664 21451 ALAKKHKRTP True PC9_epitope_Rep2 1148.71421047156 1148.71310993586 87.986 2 -3.061587014628693 0.4728582133044709 1.0 ['AKR1C1|p.Y272Lfs*3|1|0.15|ENSG00000187134|chr10:4972716-4972717|-/T|frameshift_variant', 'ENSG00000187134|ENST00000380872|AKR1C1', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3'] 38735 23451 HGHMDESL True PC9_epitope_Rep6 924.37596552736 924.37486993586 103.31 2 -3.0626353255303256 0.4728582133044709 1.0 ['RYR2|p.C244S|1|0.23|ENSG00000198626|chr1:237388140-237388140|T/A|missense_variant'] 49663 22186 KGNGGVYG True PC9_epitope_Rep2 750.36605246666 750.36494993586 90.824 2 -3.066299912244751 0.47289169164169165 1.0 ['ENSG00000000419|ENST00000371588|DPM1', 'ENST00000466152.5_1_20:49557422-49575060:-|nuORF'] 121083 8552 VERCHCKY True PC9_epitope_Rep5 1036.45825568268 1036.4571499358601 37.839 2 -3.067796977466809 0.47289169164169165 1.0 ['ENSG00000085741|ENST00000322563|WNT11'] 93110 24569 RPNPVSPY True NCI_RA007_Epitope_Rep5 928.4766655448 928.47556993586 101.98 2 -3.0686024285859137 0.47289169164169165 1.0 ['ENSG00000168769|ENST00000380013|TET2'] 38919 24596 HHGAEGVS True PC9_epitope_Rep1 792.35146503168 792.35036993586 99.473 2 -3.0688414706361904 0.47289169164169165 1.0 ['ENST00000546093.5_1_16:86580251-86588800:-|nuORF'] 122183 7200 VGAKPKIE True PC9_epitope_Rep5 840.5069030439199 840.50580993586 32.661 2 -3.0692485945764783 0.47289169164169165 1.0 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000590367.5_1_17:42931463-42950195:-|nuORF'] 126762 25902 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 105.11 3 -3.070249802705481 0.47289169164169165 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 53469 23245 KRGMLATP True NCI_RA007_Epitope_Rep5 872.4902074339599 872.48910993586 96.682 2 -3.0722980127801542 0.47289169164169165 1.0 ['ENST00000262494.12_3_16:56379319-56379799:+|nuORF'] 83005 14021 PSGSNCHL True PC9_epitope_Rep5 813.34393712309 813.34282993586 58.949 2 -3.072797535124094 0.47289169164169165 1.0 ['ENST00000374943.8_2_6:32634292-32634454:-|nuORF'] 61554 18264 LKHGHLPH True PC9_epitope_Rep4 937.52461879673 937.52352993586 78.322 2 -3.0744787308682837 0.47289281997918836 1.0 ['ENST00000335997.11_1_X:129199166-129199613:-|nuORF'] 126818 26595 VLPSQIQHQ True PC9_epitope_Rep3 1048.56654317836 1048.5654499358602 108.8 2 -3.0758005979420657 0.47289281997918836 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 77872 23426 NVGGKVIH True PC9_epitope_Rep6 822.47118624154 822.47008993586 103.21 2 -3.0761552800801946 0.47289281997918836 1.0 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6'] 133048 24755 VVPPSSSL True NCI_RA007_Epitope_Rep1 784.4330693973201 784.43196993586 102.49 2 -3.076616714461738 0.47289281997918836 1.0 ['nc|ENSG00000165891|Q96AV8-2|E2F7', 'nc|ENSG00000165891|Q96AV8-3|E2F7', 'ENSG00000165891|ENST00000322886|E2F7', 'E2F7|p.D478H|1|0.29|ENSG00000165891|chr12:77030283-77030283|C/G|missense_variant'] 70737 23358 LWSAFLCLI True NCI_RA007_Epitope_Rep3 1064.5728744287599 1064.5717699358602 101.43 2 -3.0787233868113546 0.47289830490837764 1.0 ['ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 54150 23382 KVPKACLF True PC9_epitope_Rep4 904.5204449330798 904.51934993586 98.196 2 -3.0798701563129303 0.47289943291191927 1.0 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2'] 125490 17959 VIYLQKLLR True PC9_epitope_Rep4 1144.7332145806397 1144.73155490379 77.133 3 -3.0812350577288012 0.47289943291191927 1.0 ['nc|ENSG00000183833|Q7Z4T9-1|CFAP91', 'nc|ENSG00000183833|Q7Z4T9-6|CFAP91', 'nc|ENSG00000183833|Q7Z4T9-3|CFAP91', 'nc|ENSG00000183833|Q7Z4T9-8|CFAP91', 'ENST00000482927.5_1_3:119422024-119469941:+|nuORF', 'ENSG00000183833|ENST00000273390|CFAP91'] 99180 15969 SHKCAFAG True NCI_RA007_Epitope_Rep2 819.3697579481099 819.36866993586 66.831 2 -3.0813586593332305 0.47289943291191927 1.0 ['nc|ENSG00000051825|Q99550-2|MPHOSPH9'] 91317 23669 RGRHVHRLRQL True PC9_epitope_Rep3 1426.8494155880999 1426.84777490379 96.327 3 -3.081472328647812 0.47289943291191927 1.0 ['PLXND1|p.L47Gfs*388|1|0.33|ENSG00000004399|chr3:129606501-129606502|-/GGCGCCGGCC|frameshift_variant'] 44461 25418 ILKSTRLRLAH True PC9_epitope_Rep1 1306.81973816926 1306.81864993586 102.74 2 -3.0845873698072905 0.4729257278421743 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 130473 13821 VSPKHPEVT True PC9_epitope_Rep5 992.52909504048 992.52798993586 58.181 2 -3.0862496466331595 0.47293121208652855 1.0 ['ENSG00000176809|ENST00000584306|LRRC37A3', 'ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A'] 21849 4475 ESCLHTTR True PC9_epitope_Rep1 945.43381475665 945.43270993586 22.096 2 -3.089885074365113 0.47295314792271437 1.0 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 82094 22261 PMPMKRGP True H1975_Epitope_Rep3 912.4673638144 912.4662699358599 93.092 2 -3.0905802760322554 0.47295314792271437 1.0 ['RBMXL2|p.G304Rfs*59|1|0.28|ENSG00000170748|chr11:7090028-7090029|GA/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2'] 4404 24894 AIPFIRPLR True NCI_RA007_Epitope_Rep1 1081.67603405769 1081.67492993586 103.04 2 -3.090694329375838 0.47295314792271437 1.0 ['ENST00000512751.5_1_5:112312677-112343644:+|nuORF', 'ENST00000508359.1_1_5:112336867-112343781:+|nuORF', 'nc|ENSG00000172795|Q8IU60-2|DCP2', 'ENSG00000172795|ENST00000389063|DCP2'] 124512 20841 VGVPPPAT True PC9_epitope_Rep4 736.41194002992 736.41139496793 88.318 1 -3.0910408379811156 0.47295314792271437 1.0 ['ENSG00000261221|ENST00000568956|ZNF865'] 62262 4674 LLFLKLLKFV True PC9_epitope_Rep3 1232.82605233632 1232.82494993586 23.073 2 -3.094925563881245 0.4729586315964708 1.0 ['ENST00000357033.8_1_X:33229490-33229556:-|nuORF'] 75529 9796 NKTEVTHQVP True PC9_epitope_Rep2 1151.59348620219 1151.5923899358602 43.018 2 -3.0962890901251394 0.4729597569603396 1.0 ['ENSG00000168631|ENST00000462446|MUCL3', 'nc|ENSG00000168631|Q3MIW9-2|MUCL3', 'nc|ENSG00000168631|Q3MIW9|MUCL3'] 124879 25646 VHMPEGLF True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 106.19 2 -3.0990371523931954 0.4729597569603396 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 52384 24964 KKLPMFLG True PC9_epitope_Rep2 932.5517450613598 932.55064993586 101.69 2 -3.100464550547299 0.4729597569603396 1.0 ['ENST00000274140.9_1_5:10436866-10436944:+|nuORF'] 135494 23597 WIPFIYRGVRV True PC9_epitope_Rep3 1404.80302547596 1404.80137490379 96.051 3 -3.1006893377302145 0.4729597569603396 1.0 ['ENSG00000104356|ENST00000401707|POP1'] 139856 17848 YPPFFLLL True NCI_RA007_Epitope_Rep5 1008.5684406713199 1008.56734993586 75.451 2 -3.1014393603979924 0.47296031960714957 1.0 ['ENSG00000180974|ENST00000641726|OR52E4'] 135994 14272 WQRERWQIWEL True NCI_RA007_Epitope_Rep5 1628.8211947212396 1628.82008993586 61.59 2 -3.102264361581331 0.47296031960714957 1.0 ['ENST00000489330.6_1_X:11156985-11160533:-|nuORF', 'ENSG00000047648|ENST00000337414|ARHGAP6', 'nc|ENSG00000047648|O43182-4|ARHGAP6'] 113447 10117 TLSQQQKSP True PC9_epitope_Rep2 1015.52982331647 1015.52872993586 44.253 2 -3.1028005356190844 0.47296580280693723 1.0 ['ENST00000468472.1_1_3:52853923-52864679:-|nuORF', 'nc|ENSG00000055955|Q14624-4|ITIH4', 'nc|ENSG00000055955|Q14624-3|ITIH4', 'nc|ENSG00000055955|Q14624-2|ITIH4', 'ENSG00000055955|ENST00000266041|ITIH4'] 105375 23682 SRRRPRHRVPK True PC9_epitope_Rep3 1443.87596468911 1443.87486993586 96.379 2 -3.1083187365745255 0.47298885848929023 1.0 ['ENST00000371933.7_1_1:47184401-47184626:-|nuORF'] 83733 15943 PVGSHADVAR True PC9_epitope_Rep2 1007.5148419586699 1007.51374993586 66.573 2 -3.1093229771218014 0.47298885848929023 1.0 ['ENST00000490656.5_1_7:75616724-75617617:-|nuORF'] 125716 17303 VKRKVDAQ True NCI_RA007_Epitope_Rep5 942.5610638750998 942.55996993586 73.331 2 -3.109800386820343 0.47298885848929023 1.0 ['ZNF282|p.E109K|1|0.09|ENSG00000170265|chr7:149198492-149198492|G/A|missense_variant'] 85575 4202 QGFLVMLA True PC9_epitope_Rep3 877.4731603874899 877.47206993586 21.279 2 -3.1109835296553863 0.47298885848929023 1.0 ['ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 10659 22612 CPPPCSSV True NCI_RA007_Epitope_Rep3 788.3196965212001 788.31858993586 98.298 2 -3.112478712519251 0.47298885848929023 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 50078 19013 KKGHCLSE True NCI_RA007_Epitope_Rep5 900.4487365448 900.44762993586 79.991 2 -3.1144172908903816 0.47298885848929023 1.0 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENST00000463392.5_1_2:172180771-172183527:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'ENST00000464491.5_1_2:172180771-172182690:-|nuORF'] 125271 19956 VILPFMKY True NCI_RA007_Epitope_Rep2 1009.56706077233 1009.56596993586 82.625 2 -3.114596771249627 0.47298885848929023 1.0 ['ENSG00000153208|ENST00000295408|MERTK'] 124291 21321 VGTNGGLK True PC9_epitope_Rep2 744.41300265908 744.4124549679301 87.475 1 -3.115435043383032 0.47298885848929023 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 99414 6354 SHWVWWFL True PC9_epitope_Rep4 1159.56033559911 1159.55922993586 31.518 2 -3.1222891737845053 0.4730102258423577 1.0 ['nc|ENSG00000157873|Q92956-2|TNFRSF14', 'ENST00000463835.5_1_1:2492021-2494709:+|nuORF', 'ENST00000475523.5_1_1:2490981-2494709:+|nuORF', 'ENSG00000157873|ENST00000355716|TNFRSF14', 'ENST00000463471.6_1_1:2491166-2493466:+|nuORF'] 95024 19360 RTRLRNRRY True NCI_RA007_Epitope_Rep4 1289.7541182209297 1289.75302993586 83.732 2 -3.1224780058963235 0.4730102258423577 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 139778 17814 YPFPLPVF True NCI_RA007_Epitope_Rep5 978.5214904788999 978.52038993586 75.317 2 -3.1238165419333663 0.47303159230633196 1.0 ['ENSG00000145414|ENST00000274054|NAF1'] 84517 17734 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 74.994 2 -3.1241714370854083 0.47303159230633196 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 124191 5938 VGTAGEVR True PC9_epitope_Rep5 787.41881631551 787.41770993586 27.836 2 -3.1254165160206484 0.4730370740232181 1.0 ['ENSG00000079432|ENST00000681038|CIC'] 38630 24970 HFGFILLM True PC9_epitope_Rep2 976.52044493308 976.51934993586 101.71 2 -3.131206805317849 0.47305295788126867 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 5793 10577 APDPPGGL True NCI_RA007_Epitope_Rep5 722.35990445706 722.35935496793 47.318 1 -3.133131705079247 0.47305843926186364 1.0 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 91254 22208 RGGPVRVA True PC9_epitope_Rep4 810.4824196315799 810.48132993586 93.667 2 -3.134418084925919 0.47306392052842355 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 62288 18321 LLFRWKPLWGV True NCI_RA007_Epitope_Rep4 1413.8285119478098 1413.82740993586 79.269 2 -3.136710093737526 0.4731110094033453 1.0 ['ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 128274 20243 VPPKVTTT True PC9_epitope_Rep6 841.4909186266101 841.48982993586 90.549 2 -3.1375272203243507 0.4731121281464531 1.0 ['ENSG00000113249|ENST00000523175|HAVCR1'] 78926 23687 PAGRFLRRS True PC9_epitope_Rep2 1058.6097454030198 1058.60917496793 96.585 1 -3.1377735762575854 0.4731121281464531 1.0 ['NYAP1|p.A79Pfs*124|1|0.42|ENSG00000166924|chr7:100486986-100486986|G/-|frameshift_variant'] 50033 22229 KKDVDCAY True NCI_RA007_Epitope_Rep5 940.4324177743199 940.43132993586 92.652 2 -3.1393615133607202 0.4731121281464531 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386', 'CON__Q61726', 'nc|ENSG00000290966|A6NCN2|KRT87P', 'KRT83|p.C462Afs*7|1|0.62|ENSG00000170523|chr12:52314730-52314730|G/-|frameshift_variant', 'ENSG00000170442|ENST00000423955|KRT86', 'CON__O43790', 'ENSG00000170523|ENST00000293670|KRT83', 'CON__Q6NT21', 'CON__P78385', 'ENSG00000205426|ENST00000327741|KRT81', 'CON__Q14533'] 135313 6523 WFYRRFLCFER True NCI_RA007_Epitope_Rep2 1621.79762282569 1621.79652993586 29.984 2 -3.1394564197050845 0.4731121281464531 1.0 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 126380 20957 VLKGGGGGG True PC9_epitope_Rep2 700.3867879112398 700.38623496793 86.059 1 -3.141373024838998 0.47312800990212295 1.0 ['ENST00000371222.3_1_1:59247375-59247612:-|nuORF', 'ENST00000332783.11_1_15:101142769-101143240:+|nuORF'] 131783 24786 VTPVGAQK True PC9_epitope_Rep4 798.4599528514999 798.45884993586 103.84 2 -3.147047118450801 0.4731493712490769 1.0 ['ENSG00000140396|ENST00000452400|NCOA2'] 94582 22195 RRSGVKTL True PC9_epitope_Rep2 915.5613982282699 915.56030993586 90.855 2 -3.149125992034715 0.4731493712490769 1.0 ['nc|ENSG00000171174|Q9H477-2|RBKS', 'ENSG00000171174|ENST00000302188|RBKS'] 56075 12379 LATKKYTQAGN True PC9_epitope_Rep5 1193.6404363946099 1193.63878490379 52.612 3 -3.153324948821125 0.47316581033012295 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'nc|ENSG00000187535|Q96RY7-2|IFT140', 'ENST00000565298.5_1_16:1560947-1574065:-|nuORF'] 35471 25595 GSKGAIIR True PC9_epitope_Rep2 800.48683630568 800.48572993586 104.14 2 -3.1539133288786685 0.47316581033012295 1.0 ['ENST00000586523.1_1_18:43666301-43666454:-|nuORF'] 103331 22997 SPMCAMTP True PC9_epitope_Rep6 836.3230676494801 836.32196993586 101.56 2 -3.1544446885812345 0.47316581033012295 1.0 ['HERVE_a-int_dup2|chr1:103648516-103652042:-|1.0500796464126405|0.0708487747175296|3.89|504.0|59|2|sense'] 69208 18289 LTSLRKLWLMH True NCI_RA007_Epitope_Rep4 1396.8013112238 1396.80020993586 79.104 2 -3.159310576435644 0.4731767691475642 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B'] 136802 7462 WYYYSLRFYST True PC9_epitope_Rep2 1547.7085159544297 1547.7074099358601 34.076 2 -3.1594554162058497 0.4731767691475642 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 82763 23272 PRLPRSTT True PC9_epitope_Rep2 926.5297637468201 926.52866993586 95.0 2 -3.1607000558227365 0.473192648909505 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 138658 4361 YIHTYRHIYIC True PC9_epitope_Rep5 1480.72854020636 1480.72690490379 21.845 3 -3.161848983624929 0.47319320651891295 1.0 ['ENST00000415128.6_1_6:142623466-142692070:+|nuORF'] 49652 23847 KGKKKTGGS True PC9_epitope_Rep1 889.5345147740899 889.53340993586 96.527 2 -3.161955724229747 0.47319320651891295 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 132958 25500 VVPEKKVPV True PC9_epitope_Rep2 993.6222671493298 993.6211699358599 103.77 2 -3.16432265174919 0.4731949758775578 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 39029 3267 HHRRELVFWSD True PC9_epitope_Rep5 1480.7323797168397 1480.73074490379 17.623 3 -3.164342898893221 0.4731949758775578 1.0 ['ENSG00000134569|ENST00000378623|LRP4'] 114134 24036 TPHPTTPD True H1975_Epitope_Rep3 864.39774651776 864.39664993586 100.16 2 -3.1688344237163992 0.4731949758775578 1.0 ['ENSG00000179954|ENST00000389623|SSC5D'] 84516 16515 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 70.284 2 -3.171538686047153 0.4731949758775578 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 113087 16198 TLNRQKYRHVD True PC9_epitope_Rep2 1428.75859446468 1428.7574899358601 67.555 2 -3.172110353820997 0.4731949758775578 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 133049 23615 VVPPSSSL True NCI_RA007_Epitope_Rep4 784.4330693973201 784.43196993586 102.43 2 -3.172329593318957 0.4731949758775578 1.0 ['nc|ENSG00000165891|Q96AV8-2|E2F7', 'nc|ENSG00000165891|Q96AV8-3|E2F7', 'ENSG00000165891|ENST00000322886|E2F7', 'E2F7|p.D478H|1|0.29|ENSG00000165891|chr12:77030283-77030283|C/G|missense_variant'] 111195 16106 THIQLQFQPLA True NCI_RA007_Epitope_Rep1 1294.70337100434 1294.7022699358602 66.754 2 -3.177895911100133 0.4731949758775578 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 139866 4656 YPPQYLILKLE True PC9_epitope_Rep1 1375.7751389622697 1375.7734949037902 22.778 3 -3.183264781405823 0.4731949758775578 1.0 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 134954 17787 WAPLLLTLL True PC9_epitope_Rep2 1038.6477536211798 1038.64664993586 73.707 2 -3.1843917118491185 0.4731949758775578 1.0 ['nc|ENSG00000211640|P01721|IGLV6-57', 'nc|ENSG00000223350|A0A0B4J1Y8|IGLV9-49'] 93909 23353 RRFRPKLH True PC9_epitope_Rep6 1108.6730143659197 1108.6719099358602 102.93 2 -3.189877948203187 0.4731949758775578 1.0 ['MPPED2|p.V243F|1|0.35|ENSG00000066382|chr11:30414267-30414267|C/A|missense_variant'] 26739 15728 FKCEKHAHLYR True PC9_epitope_Rep4 1430.72412353226 1430.72248490379 68.423 3 -3.1925037792423305 0.4731949758775578 1.0 ['ENSG00000044090|ENST00000265348|CUL7', 'nc|ENSG00000044090|Q14999-2|CUL7'] 84513 15617 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 66.779 2 -3.1926528332357966 0.4731949758775578 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 124886 26798 VHMPEGLF True PC9_epitope_Rep3 928.4476739156399 928.44656993586 109.9 2 -3.1948470649468703 0.4731949758775578 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 72383 12418 MKFILWRRFRW True H1975_Epitope_Rep3 1637.9129273614499 1637.9118299358602 52.955 2 -3.1965251666100705 0.4731949758775578 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF'] 48797 24468 KDNSLAKN True PC9_epitope_Rep4 888.46649478392 888.46538993586 102.6 2 -3.197579610312585 0.4731949758775578 1.0 ['ENSG00000115827|ENST00000375255|DCAF17', 'nc|ENSG00000115827|Q5H9S7-2|DCAF17'] 125673 25152 VKLLVQVL True H1975_Epitope_Rep3 910.62153887334 910.6209949679301 104.63 1 -3.200570158282159 0.4731949758775578 1.0 ['ENSG00000268320|ENST00000595228|SCGB1C2', 'ENSG00000188076|ENST00000342878|SCGB1C1'] 28322 23589 FRRKLRELQR True PC9_epitope_Rep4 1400.8476842526 1400.84658993586 99.042 2 -3.2040758430316476 0.4731949758775578 1.0 ['nc|ENSG00000182329|Q0VF49-2|KIAA2012', 'nc|ENSG00000182329|Q0VF49|KIAA2012', 'ENSG00000182329|ENST00000498697|KIAA2012'] 94571 21280 RRRYLRRKER True NCI_RA007_Epitope_Rep2 1487.9021794369498 1487.90108993586 88.031 2 -3.2043705520388843 0.4731949758775578 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 135517 16762 WKFTYAHKYL True NCI_RA007_Epitope_Rep5 1355.70264272835 1355.7010049037901 71.235 3 -3.205482175778597 0.4731949758775578 1.0 ['ENSG00000139133|ENST00000266483|ALG10', 'ENSG00000175548|ENST00000308742|ALG10B'] 91028 4184 RFIFSLPPE True NCI_RA007_Epitope_Rep5 1104.59678067748 1104.59568993586 22.622 2 -3.2056854253228186 0.4731949758775578 1.0 ['CDH11|p.Q563Rfs*10|1|0.26|ENSG00000140937|chr16:64950975-64950975|C/-|frameshift_variant', 'nc|ENSG00000140937|P55287-2|CDH11', 'ENSG00000140937|ENST00000268603|CDH11', 'ENST00000569095.1_1_16:65002436-65005938:-|nuORF'] 16155 14833 EEDGLVAWF True NCI_RA007_Epitope_Rep1 1064.48147614172 1064.4803699358602 61.757 2 -3.2063647214824824 0.4731949758775578 1.0 ['NUDT12|p.K299*|1|0.27|ENSG00000112874|chr5:103556000-103556001|-/A|frameshift_variant', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'ENSG00000112874|ENST00000230792|NUDT12'] 82812 23780 PRRRRRREER True PC9_epitope_Rep2 1465.85629187369 1465.85464490379 96.941 3 -3.2068044835369487 0.4731949758775578 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 125639 23733 VKKTKTDLKH True NCI_RA007_Epitope_Rep3 1196.7241064489199 1196.72300993586 102.88 2 -3.2098529739545993 0.4731949758775578 1.0 ['PHF12|p.Q258Kfs*12|1|0.0|ENSG00000109118|chr17:28921752-28921753|-/GCCATGACACATGCTTAAGATCTGTTTT|frameshift_variant'] 106685 10779 STTPGKKL True PC9_epitope_Rep1 830.48616759934 830.48506993586 46.349 2 -3.2104020182932023 0.4731949758775578 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 15998 22624 EDRYYRENMHR True PC9_epitope_Rep5 1567.69500823195 1567.6939099358601 92.022 2 -3.2118836369693677 0.4731949758775578 1.0 ['ENSG00000171867|ENST00000379440|PRNP'] 38708 5314 HGELGGHP True PC9_epitope_Rep2 802.3722004762601 802.37110993586 25.83 2 -3.2125993727333158 0.473201010615623 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2'] 16216 12576 EEELGIIPRAI True H1975_Epitope_Rep3 1238.6870522338597 1238.6859499358602 53.576 2 -3.2126060241481107 0.473201010615623 1.0 ['KIF21B|p.Q110L|1|0.2|ENSG00000116852|chr1:201008887-201008887|T/A|missense_variant'] 124880 1727 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 9.5032 2 -3.215172914881739 0.473201010615623 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 39962 20545 HPLFLWLKWK True NCI_RA007_Epitope_Rep3 1366.7913981630998 1366.78975490379 89.494 3 -3.2168648789223684 0.47321688500727804 1.0 ['ENSG00000121314|ENST00000240615|TAS2R8'] 136751 7927 WYMKRHIDYSR True NCI_RA007_Epitope_Rep2 1553.75615193653 1553.7550499358601 35.466 2 -3.2243580237718232 0.4732535531965773 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 81255 22260 PKPPGEEAE True PC9_epitope_Rep2 952.45017601344 952.44906993586 91.102 2 -3.225882640923683 0.4732590297560874 1.0 ['ENST00000518883.6_1_8:38244092-38245477:+|nuORF'] 87649 20480 QQRQRRRLPP True NCI_RA007_Epitope_Rep2 1333.7803329687697 1333.77922993586 84.734 2 -3.2327246659351276 0.4732749030493954 1.0 ['ENST00000298585.2_1_9:140476760-140476931:-|nuORF'] 54149 20599 KVPKACLF True NCI_RA007_Epitope_Rep5 904.5204449330798 904.51934993586 86.176 2 -3.2364665927102276 0.47331212442559206 1.0 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2'] 15718 2649 EAYKSGTQ True PC9_epitope_Rep2 882.4083112014598 882.40720993586 14.842 2 -3.236527180594144 0.47331212442559206 1.0 ['KCTD19|p.W494G|1|0.37|ENSG00000168676|chr16:67294690-67294690|A/C|missense_variant'] 99893 24818 SILTLITLLT True NCI_RA007_Epitope_Rep5 1086.69001235598 1086.68890993586 102.95 2 -3.2392687236716404 0.47331212442559206 1.0 ['nc|ENSG00000148680|P34969-3|HTR7', 'nc|ENSG00000148680|P34969-2|HTR7', 'ENSG00000148680|ENST00000336152|HTR7'] 79598 7979 PDKGQAGP True PC9_epitope_Rep2 768.3766171503598 768.37552993586 36.054 2 -3.254666021431958 0.4733340264060713 1.0 ['nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 93949 25250 RRHKKLPLTA True PC9_epitope_Rep2 1218.76730867358 1218.7662099358602 102.79 2 -3.25501550268335 0.4733340264060713 1.0 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17', 'ENST00000575447.1_1_16:24979927-25026645:-|nuORF'] 10661 25232 CPPPCSSV True PC9_epitope_Rep3 788.3196965212001 788.31858993586 102.43 2 -3.2551906183403876 0.4733340264060713 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 50087 23437 KKHAIGIY True NCI_RA007_Epitope_Rep3 928.5494365622399 928.54832993586 101.73 2 -3.2559038072183295 0.4733340264060713 1.0 ['ENSG00000101134|ENST00000262593|DOK5'] 15066 7156 DYRYLFQMHDE True H1975_Epitope_Rep1 1515.64526407487 1515.6441699358602 32.549 2 -3.261200415525039 0.4733504516960694 1.0 ['ENST00000598723.5_1_19:53210029-53217273:-|nuORF'] 92692 2147 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 11.891 3 -3.261674670904623 0.4733504516960694 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 60821 19858 LHTRTRSL True PC9_epitope_Rep5 982.5672118847 982.56610993586 81.433 2 -3.2630346996801745 0.4733504516960694 1.0 ['ENSG00000131381|ENST00000253699|RBSN'] 48559 25094 KAPPAKVL True NCI_RA007_Epitope_Rep5 822.53272386894 822.53217496793 104.03 1 -3.2633691140512484 0.4733559265650664 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 124392 20612 VGVAPAPL True PC9_epitope_Rep4 722.4326754745 722.43212496793 87.438 1 -3.2653365094634856 0.47336687596157845 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 140121 24585 YQPSRGAA True PC9_epitope_Rep2 848.4140652882398 848.41296993586 100.19 2 -3.2723560493535406 0.47336687596157845 1.0 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136'] 48484 20390 KAFSDAIK True NCI_RA007_Epitope_Rep4 878.4861675993399 878.48506993586 88.288 2 -3.2752389496141343 0.47336742967629264 1.0 ['ENST00000404006.5_1_7:5024574-5028783:+|nuORF', 'ENST00000406608.2_1_7:5016050-5028783:+|nuORF'] 33361 24609 GKVKAPLL True NCI_RA007_Epitope_Rep3 824.5483739330799 824.54726993586 106.43 2 -3.278076139626952 0.47336742967629264 1.0 ['ENSG00000131944|ENST00000588258|FAAP24'] 6554 16262 APTVRATR True PC9_epitope_Rep4 870.5035489989799 870.50244993586 70.505 2 -3.279582387228443 0.47336798336798336 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 23650 13000 EWWFRWRLDRY True H1975_Epitope_Rep1 1711.8371791385498 1711.8360899358602 55.086 2 -3.2822266731378655 0.47336798336798336 1.0 ['ENSG00000127995|ENST00000297273|CASD1'] 91437 18270 RHLRRLPD True NCI_RA007_Epitope_Rep5 1061.62064443989 1061.61954993586 77.081 2 -3.2842046647050593 0.4733734576563653 1.0 ['ENST00000476670.2_3_6:29599279-29600558:-|nuORF', 'ENST00000485508.5_1_6:29599279-29600271:-|nuORF'] 104582 21110 SQRFKDTR True H1975_Epitope_Rep1 1036.5413910596799 1036.54028993586 87.69 2 -3.285588674755533 0.47337893183093904 1.0 ['nc|ENSG00000142606|Q495T6-2|MMEL1', 'ENSG00000142606|ENST00000378412|MMEL1', 'nc|ENSG00000142606|Q495T6-3|MMEL1'] 49890 3488 KIHRMKERYEH True NCI_RA007_Epitope_Rep1 1525.7936000744098 1525.79194490379 17.48 3 -3.293625203026946 0.473411221753321 1.0 ['ENSG00000139597|ENST00000380130|N4BP2L1'] 52560 24425 KLGKAACY True PC9_epitope_Rep3 852.4527592960799 852.45166993586 99.277 2 -3.2949990766710266 0.473411221753321 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'SPEG|p.Q1757Pfs*6|1|0.16|ENSG00000072195|chr2:219480065-219480066|-/C|frameshift_variant', 'ENST00000485069.1_1_2:220336438-220336879:+|nuORF', 'SPEG|p.T2826Hfs*78|1|0.23|ENSG00000072195|chr2:219489488-219489488|C/-|frameshift_variant'] 92025 24714 RKRRTSLKL True PC9_epitope_Rep2 1156.7516586094398 1156.75056993586 100.74 2 -3.295943012738824 0.473411221753321 1.0 ['ENSG00000099901|ENST00000430524|RANBP1', 'RANBP1|p.R57Q|1|0.09|ENSG00000099901|chr22:20122281-20122281|G/A|missense_variant'] 116046 12105 TSPAKTKI True PC9_epitope_Rep2 844.50181766348 844.50072993586 51.871 2 -3.29846397681012 0.473411221753321 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 10017 11879 AYRKGIIL True PC9_epitope_Rep1 932.5807366905199 932.5801849679301 50.558 1 -3.2988920701263384 0.473411774488608 1.0 ['ENSG00000122140|ENST00000241600|MRPS2'] 19049 15048 ELFLHMPLCRE True NCI_RA007_Epitope_Rep1 1386.67881313262 1386.67770993586 62.599 2 -3.300017409935914 0.473411774488608 1.0 ['ENST00000592831.1_1_17:40672405-40672870:+|nuORF'] 49813 25408 KHNIVHVH True PC9_epitope_Rep2 982.5460825173 982.54498993586 103.41 2 -3.305439746548672 0.4734172478666237 1.0 ['ENSG00000139668|ENST00000298125|WDFY2'] 122705 22341 VGGGQGQP True PC9_epitope_Rep2 698.33475233838 698.3342049679301 91.421 1 -3.3075999057282104 0.47342327360412423 1.0 ['nc|ENSG00000132677|Q9H310-3|RHBG'] 52762 25538 KNHKIQLKG True PC9_epitope_Rep3 1064.6454622054 1064.64487496793 103.7 1 -3.3084719255335875 0.47342327360412423 1.0 ['L1PA6_dup4626|chr12:12411356-12412894:-|1.329701407366198|0.0078869281237918|7.4|455.0|39|3|sense'] 128364 23046 VPQYRAILWRK True PC9_epitope_Rep6 1428.8353882333997 1428.8342899358602 101.74 2 -3.3101551415443615 0.47342327360412423 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3', 'GARNL3|p.M654Wfs*2|1|0.42|ENSG00000136895|chr9:127357240-127357240|C/-|frameshift_variant'] 55453 20148 LAFRGKMV True NCI_RA007_Epitope_Rep3 920.5265929426798 920.52548993586 87.801 2 -3.316500576203373 0.4734287466350701 1.0 ['ENST00000568840.1_1_15:75182430-75185220:+|nuORF'] 27765 26253 FPVEDVAKKS True PC9_epitope_Rep4 1118.5971746002997 1118.5960699358602 111.32 2 -3.317366185600935 0.4734292989658577 1.0 ['nc|ENSG00000154040|O75952-5|CABYR', 'ENSG00000154040|ENST00000399496|CABYR'] 136371 23882 WTIFLFLRWVL True PC9_epitope_Rep1 1492.8594777229198 1492.85838993586 96.663 2 -3.3178349104991898 0.4734292989658577 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 91942 4711 RKMTLDRSEY True NCI_RA007_Epitope_Rep4 1297.6448701520499 1297.64323490379 24.55 3 -3.3273260635568365 0.473457213527052 1.0 ['LDLR-SMARCA4|3|fusion', 'LDLR-SMARCA4|4|fusion', 'nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'LDLR-SMARCA4|1|fusion', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'LDLR-SMARCA4|2|fusion', 'LDLR-SMARCA4|5|fusion', 'nc|ENSG00000130164|P01130-6|LDLR', 'nc|ENSG00000130164|P01130-4|LDLR', 'ENST00000560173.1_1_19:11221401-11224126:+|nuORF'] 79288 18144 PAPSPAAADK True PC9_epitope_Rep5 923.4712458111899 923.47014993586 74.8 2 -3.329290465400799 0.473457213527052 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.P4655Kfs*8|1|0.04|ENSG00000055609|chr7:152146655-152146667|TTAAATACGCTGG/-|frameshift_variant', 'KMT2C|p.L3837Ffs*9|1|0.11|ENSG00000055609|chr7:152159022-152159023|-/A|frameshift_variant', 'KMT2C|p.P3459Tfs*3|1|0.2|ENSG00000055609|chr7:152163202-152163203|-/T|frameshift_variant', 'KMT2C|p.R2114Nfs*38|1|0.08|ENSG00000055609|chr7:152181519-152181520|-/AAGACCATCTACACAAACTGACTTGT|frameshift_variant', 'KMT2C|p.L732Ffs*5|1|0.12|ENSG00000055609|chr7:152248240-152248240|G/-|frameshift_variant', 'KMT2C|p.G903*|1|0.04|ENSG00000055609|chr7:152235879-152235880|-/TA|frameshift_variant', 'KMT2C|p.N1398Hfs*15|1|0.2|ENSG00000055609|chr7:152199359-152199360|TT/-|frameshift_variant'] 119504 10454 VASALEKK True PC9_epitope_Rep5 844.50181766348 844.50072993586 45.198 2 -3.330686541099857 0.473457213527052 1.0 ['nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ'] 55723 17805 LALLVVLSPP True H1975_Epitope_Rep2 1020.6583183048799 1020.6577749679301 73.807 1 -3.334066504628466 0.473457213527052 1.0 ['ENSG00000204301|ENST00000375023|NOTCH4'] 114328 25138 TPRASVGN True PC9_epitope_Rep2 800.41406528824 800.41296993586 102.36 2 -3.33464755895862 0.473457213527052 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'SLX4|p.V1558Cfs*3|1|0.16|ENSG00000188827|chr16:3584840-3584840|G/-|frameshift_variant', 'ENSG00000188827|ENST00000294008|SLX4'] 49827 22970 KHRWFWLLPVK True PC9_epitope_Rep6 1508.87685912256 1508.87576993586 101.45 2 -3.3355051433640495 0.473457213527052 1.0 ['HEATR1|p.T1829Nfs*6|1|0.16|ENSG00000119285|chr1:236556128-236556129|-/T|frameshift_variant', 'ENSG00000119285|ENST00000366582|HEATR1', 'HEATR1|p.E368Rfs*31|1|0.02|ENSG00000119285|chr1:236594103-236594104|-/T|frameshift_variant', 'HEATR1|p.E403Gfs*12|1|0.25|ENSG00000119285|chr1:236592619-236592620|-/GAATTGTACAGAGACTGTC|frameshift_variant'] 91255 22077 RGGPVRVA True PC9_epitope_Rep5 810.4824196315799 810.48132993586 89.949 2 -3.340328277054518 0.473457213527052 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 34544 2820 GPSHRHQGH True H1975_Epitope_Rep2 1011.4747084821902 1011.4736099358599 14.915 2 -3.3423185279087773 0.47348402182385035 1.0 ['ENSG00000130528|ENST00000252825|HRC'] 89957 19076 RDENYQKV True PC9_epitope_Rep5 1050.50942222506 1050.50832993586 78.405 2 -3.3430784608129644 0.47348402182385035 1.0 ['nc|ENSG00000144935|P48995-2|TRPC1', 'ENSG00000144935|ENST00000476941|TRPC1'] 85466 21480 QFHRHKQL True PC9_epitope_Rep2 1092.59409533888 1092.59357496793 88.093 1 -3.3430949100843694 0.47348402182385035 1.0 ['IL4|p.G116Afs*5|1|0.15|ENSG00000113520|chr5:132679874-132679874|G/-|frameshift_variant', 'nc|ENSG00000113520|P05112-2|IL4', 'ENSG00000113520|ENST00000231449|IL4'] 78919 6508 PAGPPGEK True PC9_epitope_Rep2 751.38645355807 751.38534993586 30.446 2 -3.350537489968149 0.4734998856857814 1.0 ['ENSG00000139219|ENST00000380518|COL2A1', 'nc|ENSG00000139219|P02458-1|COL2A1'] 10520 20503 CLASSARS True PC9_epitope_Rep2 793.3752372513701 793.37412993586 84.295 2 -3.3546578560073046 0.4735004364633994 1.0 ['ENSG00000115318|ENST00000264094|LOXL3', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3'] 138030 3831 YFYNYPAVC True PC9_epitope_Rep5 1138.4793679667398 1138.47826993586 19.82 2 -3.3547932169262773 0.4735004364633994 1.0 ['ENST00000495897.2_1_10:75227245-75231333:-|nuORF', 'nc|ENSG00000107758|P16298-2|PPP3CB', 'nc|ENSG00000107758|P16298-3|PPP3CB', 'ENSG00000107758|ENST00000360663|PPP3CB', 'nc|ENSG00000107758|P16298-4|PPP3CB'] 120967 5926 VEPHSPSPSSK True PC9_epitope_Rep2 1150.56185172074 1150.56074993586 28.185 2 -3.357916837946791 0.4735113789878416 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 44228 7522 IKKLKRKPP True PC9_epitope_Rep2 1106.76518341526 1106.76408993586 34.301 2 -3.3589918189245322 0.4735113789878416 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 93907 26402 RRFPKKWERPV True PC9_epitope_Rep5 1497.8680853440098 1497.8664449037901 107.44 3 -3.362390628245402 0.47351685007949623 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 53956 22103 KTVSTKGKTT True NCI_RA007_Epitope_Rep5 1049.6080736371698 1049.6069699358602 92.149 2 -3.3634792903676614 0.4735174004759282 1.0 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1', 'COL17A1|p.T421S|1|0.47|ENSG00000065618|chr10:104058151-104058151|G/C|missense_variant'] 62438 26036 LLHLLIPD True PC9_epitope_Rep1 932.56950330048 932.56895496793 105.38 1 -3.364294397247535 0.4735174004759282 1.0 ['ENST00000513372.5_1_4:2256680-2256926:-|nuORF'] 142417 9730 YYFCRWYRNRK True H1975_Epitope_Rep3 1653.7986854548496 1653.79758993586 42.446 2 -3.366736417408096 0.4735496742417158 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 49426 18135 KEWFWLERFWL True H1975_Epitope_Rep3 1638.8347195270594 1638.83362993586 75.993 2 -3.368931289790985 0.4735496742417158 1.0 ['CERS3|p.A61Gfs*11|1|0.35|ENSG00000154227|chr15:100490923-100490924|-/C|frameshift_variant', 'CERS3|p.T232Pfs*3|1|0.17|ENSG00000154227|chr15:100472969-100472969|C/-|frameshift_variant', 'ENSG00000154227|ENST00000679737|CERS3'] 70701 10155 LWMWWRRNRRG True NCI_RA007_Epitope_Rep2 1615.8418876795097 1615.8407899358601 44.089 2 -3.3693876461913805 0.4735496742417158 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 45693 14940 IRKSEYTQ True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 62.289 2 -3.371355515517303 0.4735496742417158 1.0 ['ENSG00000198231|ENST00000389924|DDX42', 'nc|ENSG00000198231|Q86XP3-2|DDX42'] 95366 17164 RVVVRIDS True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 75.399 2 -3.3767458690582512 0.47356553544338 1.0 ['nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 99907 14971 SIMHPSQHAR True PC9_epitope_Rep2 1162.5665602617003 1162.5654699358602 62.843 2 -3.39155058465928 0.47359780553188835 1.0 ['NOS1|p.S891Lfs*34|1|0.07|ENSG00000089250|chr12:117247501-117247502|-/A|frameshift_variant', 'nc|ENSG00000089250|P29475-2|NOS1', 'ENSG00000089250|ENST00000317775|NOS1', 'nc|ENSG00000089250|P29475-5|NOS1', 'nc|ENSG00000089250|P29475-3|NOS1'] 130000 19423 VRWLRFWLLFW True NCI_RA007_Epitope_Rep2 1620.9081592508396 1620.9070699358601 80.455 2 -3.3942795321481696 0.47359780553188835 1.0 ['ENST00000531894.5_1_16:70011782-70023933:-|nuORF'] 116381 23208 TTGRTSSTG True PC9_epitope_Rep4 866.40937383062 866.40826993586 97.498 2 -3.3970888144143814 0.47359780553188835 1.0 ['ENST00000263980.7_1_1:27429020-27429197:-|nuORF'] 28223 3850 FRHPYHHSPW True NCI_RA007_Epitope_Rep4 1362.63702278002 1362.63592993586 21.011 2 -3.397462127132366 0.47359780553188835 1.0 ['CKAP5|p.N941Kfs*45|1|0.29|ENSG00000175216|chr11:46777478-46777479|-/T|frameshift_variant'] 90514 6207 RELQILPRV True PC9_epitope_Rep4 1122.6873270173799 1122.68569490379 30.917 3 -3.4019246894310213 0.47362952495739996 1.0 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'ZSCAN5A|p.G320Afs*11|1|0.15|ENSG00000131848|chr19:56222107-56222107|C/-|frameshift_variant', 'nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A'] 91057 23226 RFLFYFVFL True PC9_epitope_Rep3 1250.6852017590597 1250.68410993586 94.613 2 -3.403131413512739 0.47362952495739996 1.0 ['ENST00000264203.7_1_1:19665365-19665608:-|nuORF'] 90257 5415 REEEYEEYEEY True H1975_Epitope_Rep1 1566.59981292074 1566.5987099358601 25.887 2 -3.404972249404122 0.4736300729380961 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'TTN|p.V17468Gfs*22|1|0.13|ENSG00000155657|chr2:178597756-178597757|-/C|frameshift_variant', 'TTN|p.G16715Wfs*2|1|0.07|ENSG00000155657|chr2:178602336-178602337|-/A|frameshift_variant', 'TTN|p.E13671Rfs*28|1|0.05|ENSG00000155657|chr2:178620587-178620588|-/T|frameshift_variant', 'TTN|p.K12777Sfs*6|1|0.24|ENSG00000155657|chr2:178632752-178632753|TT/-|frameshift_variant', 'TTN|p.G12024Wfs*6|1|0.29|ENSG00000155657|chr2:178636734-178636735|-/A|frameshift_variant', 'TTN|p.V11387Ffs*19|1|0.36|ENSG00000155657|chr2:178671118-178671118|A/-|frameshift_variant', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 94648 24330 RRWMVRKMKT True PC9_epitope_Rep2 1390.7801989397399 1390.77856490379 99.126 3 -3.4053607599984845 0.4736300729380961 1.0 ['ENSG00000225921|ENST00000451315|NOL7'] 75495 6700 NKLQYFMEQFY True NCI_RA007_Epitope_Rep2 1509.6962370185697 1509.6951299358602 30.675 2 -3.407865390536186 0.4736328125 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.K3559Qfs*13|1|0.07|ENSG00000253729|chr8:47789234-47789235|-/TTTTTCCCCTG|frameshift_variant', 'PRKDC|p.A1161Hfs*13|1|0.06|ENSG00000253729|chr8:47897279-47897279|G/-|frameshift_variant'] 100351 17202 SKQPQLHK True NCI_RA007_Epitope_Rep5 964.54541381096 964.54430993586 72.941 2 -3.4120676936814704 0.4736328125 1.0 ['ENST00000452532.1_1_X:55934586-55934826:+|nuORF'] 64120 11297 LPEHLKAK True PC9_epitope_Rep4 934.5600012459399 934.55890993586 51.231 2 -3.4121032359574146 0.4736328125 1.0 ['nc|ENSG00000115525|Q9UNP4-2|ST3GAL5', 'nc|ENSG00000115525|Q9UNP4-3|ST3GAL5', 'ENSG00000115525|ENST00000638572|ST3GAL5'] 47632 11650 IWCQLVEQWVM True PC9_epitope_Rep6 1433.68356415989 1433.6824699358601 55.937 2 -3.4131329642009103 0.4736328125 1.0 ['ENST00000465713.5_1_2:219472784-219498591:+|nuORF', 'ENST00000483685.5_1_2:219472784-219496902:+|nuORF', 'ENST00000469493.5_1_2:219472784-219492999:+|nuORF'] 48817 5064 KDRISREEME True PC9_epitope_Rep5 1291.6190493270299 1291.61740490379 24.505 3 -3.414248382690651 0.4736328125 1.0 ['ENST00000605810.1_1_3:70174416-70174620:-|nuORF'] 115384 22777 TRKKTRKRR True PC9_epitope_Rep6 1228.7952547569198 1228.79467496793 100.7 1 -3.4156484388163078 0.4736328125 1.0 ['ENST00000361675.6_2_7:134618055-134618145:+|nuORF'] 53821 25372 KTELQQIGKKI True PC9_epitope_Rep5 1284.7765359445996 1284.7759749679299 102.81 1 -3.4175538194336967 0.4736328125 1.0 ['nc|ENSG00000134744|Q5TAX3|TUT4', 'ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3-2|TUT4'] 110769 5326 TGHSKGFG True PC9_epitope_Rep2 789.3769515035299 789.37584993586 25.874 2 -3.4190187169839317 0.4736328125 1.0 ['ENSG00000120948|ENST00000240185|TARDBP', 'nc|ENSG00000120948|Q13148-4|TARDBP'] 134209 17571 VYLVLVQVHRE True NCI_RA007_Epitope_Rep4 1353.7768702977698 1353.7757699358601 76.035 2 -3.4202633221133314 0.4736328125 1.0 ['ENST00000523711.5_1_8:1824717-1874701:+|nuORF'] 105357 22127 SRRGPGVP True PC9_epitope_Rep2 824.4616841869998 824.4611349679301 90.589 1 -3.421468717825438 0.4736328125 1.0 ['ENSG00000135441|ENST00000548925|BLOC1S1'] 77781 22969 NTSRCPAP True H1975_Epitope_Rep2 844.3861362882399 844.38502993586 94.799 2 -3.4232276188961674 0.47363828085230164 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 61151 25366 LIKGGRIRKQ True PC9_epitope_Rep2 1167.7564096367098 1167.75475490379 103.25 3 -3.435621183343925 0.47369569282553137 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'LAMA1|p.A2324Lfs*3|1|0.31|ENSG00000101680|chr18:6966227-6966227|C/-|frameshift_variant', 'LAMA1|p.L2158Sfs*49|1|0.33|ENSG00000101680|chr18:6975954-6975954|G/-|frameshift_variant', 'LAMA1|p.R1988Sfs*8|1|0.09|ENSG00000101680|chr18:6980564-6980564|C/-|frameshift_variant'] 140142 13694 YQRFWIETEEY True PC9_epitope_Rep5 1562.70415884998 1562.7030699358602 57.701 2 -3.4377126008337573 0.47369678585527 1.0 ['nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 16255 16242 EEEWRQRRR True PC9_epitope_Rep2 1343.6806784971498 1343.6795899358601 67.719 2 -3.4382169381507217 0.47369678585527 1.0 ['ENST00000555166.5_2_14:57857320-57866549:+|nuORF', 'ENST00000554703.1_1_14:57857320-57876115:+|nuORF'] 30082 10374 FYIYHLYWWEF True H1975_Epitope_Rep1 1665.7656369077297 1665.76452993586 44.852 2 -3.438401864939589 0.47369678585527 1.0 ['ENSG00000132017|ENST00000254337|DCAF15'] 131484 14876 VTKHKEVL True PC9_epitope_Rep5 952.5705659296399 952.56946993586 62.224 2 -3.4386341532822837 0.47369678585527 1.0 ['nc|ENSG00000163492|Q6ZP82-1|CCDC141', 'ENSG00000163492|ENST00000443758|CCDC141'] 117356 11620 TVPEHSATG True PC9_epitope_Rep5 897.4192102383299 897.41810993586 49.692 2 -3.4403528092023756 0.4737022532021649 1.0 ['ENSG00000074276|ENST00000261944|CDHR2'] 40651 7541 HRPAGSPP True PC9_epitope_Rep2 817.4194850218499 817.41838993586 34.372 2 -3.4466143780775758 0.4737448970052043 1.0 ['ENST00000308664.10_1_12:110719137-110719434:+|nuORF'] 62551 18237 LLKKCHQCV True PC9_epitope_Rep5 1070.5728915121 1070.5717899358601 75.163 2 -3.449054736496106 0.4737448970052043 1.0 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 80320 10179 PGGGAPHF True H1975_Epitope_Rep2 738.34492309926 738.3443749679301 44.155 1 -3.4525087901226876 0.4737448970052043 1.0 ['SVA_D_dup445|chr5:69514530-69516541:-|5.086170895852312|0.1334218778948128|5.25|538.0|85|3|anti-sense', 'SVA_D_dup1229|chr17:30522805-30524227:+|1.2483296746688612|0.476847412502663|1.39|540.0|56|2|anti-sense'] 94131 13931 RRLWWYHWICW True H1975_Epitope_Rep1 1703.82959166031 1703.82848993586 58.74 2 -3.4558376294073874 0.4737448970052043 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 110770 5230 TGHSKGFG True PC9_epitope_Rep4 789.3769515035299 789.37584993586 26.817 2 -3.462052590570836 0.4737815265716541 1.0 ['ENSG00000120948|ENST00000240185|TARDBP', 'nc|ENSG00000120948|Q13148-4|TARDBP'] 98497 20400 SFKRRWRR True NCI_RA007_Epitope_Rep4 1190.6897270592199 1190.68807490379 88.33 3 -3.4645078719122866 0.473807767817262 1.0 ['ENST00000285814.8_1_2:122494326-122494371:-|nuORF'] 3304 7987 AGGARARWR True PC9_epitope_Rep1 999.5474794996298 999.54638993586 35.544 2 -3.4679249080848495 0.4738132336137945 1.0 ['ENSG00000109743|ENST00000265016|BST1'] 139542 2018 YLTEQLVAIY True NCI_RA007_Epitope_Rep1 1211.6437904395498 1211.64268993586 10.6 2 -3.4738208837854465 0.47382033092015746 1.0 ['ENST00000542112.5_1_11:62621512-62623345:-|nuORF'] 140399 8193 YREWRRYYEVW True H1975_Epitope_Rep3 1704.8161093408 1704.8150099358602 36.494 2 -3.4826700032532374 0.47382033092015746 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 82718 24162 PRADPRTV True PC9_epitope_Rep2 910.49846361854 910.49736993586 98.466 2 -3.489011249498314 0.47382033092015746 1.0 ['ENST00000536793.5_1_12:15837214-15942237:-|nuORF'] 90976 23645 RFCVLVLELRW True PC9_epitope_Rep4 1432.8013112237998 1432.80020993586 99.294 2 -3.490767857864542 0.47382033092015746 1.0 ['ENST00000548725.5_1_12:56553869-56554112:+|nuORF'] 119891 23766 VDIKKPLV True NCI_RA007_Epitope_Rep4 910.5851533646199 910.58404993586 103.03 2 -3.4924465004161656 0.47382033092015746 1.0 ['ENSG00000100294|ENST00000290429|MCAT'] 52998 13993 KPHALQAC True PC9_epitope_Rep5 866.44325724154 866.44214993586 58.846 2 -3.493609809642448 0.47382033092015746 1.0 ['ADAMTSL3|p.W763Lfs*4|1|0.29|ENSG00000156218|chr15:83942764-83942765|-/T|frameshift_variant', 'ADAMTSL3|p.V930*|1|0.22|ENSG00000156218|chr15:83982414-83982414|C/-|frameshift_variant', 'ADAMTSL3|p.T1408Nfs*4|1|0.19|ENSG00000156218|chr15:84016446-84016447|-/A|frameshift_variant', 'ENST00000561483.5_1_15:84323016-84694242:+|nuORF', 'nc|ENSG00000156218|P82987-2|ADAMTSL3', 'ENSG00000156218|ENST00000286744|ADAMTSL3'] 94602 16935 RRSWRPRKQWL True NCI_RA007_Epitope_Rep2 1567.89603142735 1567.89492993586 70.611 2 -3.4987769116901535 0.47382033092015746 1.0 ['ENST00000397497.8_2_8:27288464-27288860:+|nuORF'] 69803 23892 LVGGPFLP True NCI_RA007_Epitope_Rep2 798.46397560278 798.46286993586 100.31 2 -3.5176611160094624 0.47389358011612087 1.0 ['ENST00000216252.3_1_22:41856152-41856401:-|nuORF'] 87110 18379 QNSLLALA True NCI_RA007_Epitope_Rep3 828.4705175352 828.46942993586 80.481 2 -3.5200804663029546 0.47389358011612087 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 82764 23366 PRLPRSTT True PC9_epitope_Rep2 926.5297637468201 926.52866993586 95.351 2 -3.529994600605611 0.4739099727882678 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 115383 24766 TRKKTRKRR True PC9_epitope_Rep3 1228.7952547569198 1228.79467496793 100.64 1 -3.5375345304719534 0.4739099727882678 1.0 ['ENST00000361675.6_2_7:134618055-134618145:+|nuORF'] 92041 12084 RKRYVYVW True NCI_RA007_Epitope_Rep2 1168.6505475858396 1168.64890490379 51.597 3 -3.537821410569517 0.4739099727882678 1.0 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF', 'nc|ENSG00000110074|Q96CU9-2|FOXRED1', 'nc|ENSG00000110074|Q96CU9-3|FOXRED1', 'ENSG00000110074|ENST00000263578|FOXRED1'] 53879 25268 KTKRKSVLAT True PC9_epitope_Rep2 1130.7135417652198 1130.7124499358601 102.86 2 -3.543177009928111 0.47392636443890535 1.0 ['TMEM132E|p.T731Lfs*64|1|0.31|ENSG00000181291|chr17:34637464-34637464|C/-|frameshift_variant', 'ENSG00000181291|ENST00000631683|TMEM132E'] 92497 17710 RLWRPRPWVFG True NCI_RA007_Epitope_Rep1 1468.8204068755997 1468.81930993586 73.025 2 -3.5472507539672375 0.47392636443890535 1.0 ['MLNR|p.S101P|1|0.78|ENSG00000102539|chr13:49220638-49220638|T/C|missense_variant'] 120968 6016 VEPHSPSPSSK True PC9_epitope_Rep2 1150.56185172074 1150.56074993586 28.531 2 -3.548345974956379 0.47392636443890535 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 65563 23544 LRRSTDKL True PC9_epitope_Rep2 987.58252759567 987.58142993586 96.037 2 -3.5563489226666016 0.4739318280954656 1.0 ['ENST00000497446.5_1_7:107332392-107334073:+|nuORF', 'ENST00000477350.5_1_7:107332338-107335121:+|nuORF'] 97779 20357 SEKKPQRR True PC9_epitope_Rep4 1027.5886756052698 1027.58756993586 86.445 2 -3.560181606625087 0.4739372916385389 1.0 ['ENST00000481383.1_1_3:180688091-180688984:+|nuORF'] 92432 23751 RLRLRKERVSD True PC9_epitope_Rep2 1426.84807817542 1426.84642490379 96.829 3 -3.5602916307477446 0.47394275506812894 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 28230 25588 FRIRAKNT True PC9_epitope_Rep2 1004.5879473292799 1004.58737496793 104.11 1 -3.5642099257677695 0.4739482183842391 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN'] 122490 6517 VGEKFRARS True PC9_epitope_Rep5 1048.5777765683997 1048.57666993586 30.04 2 -3.5725790371447164 0.4739503826702805 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.K3832Nfs*8|1|0.05|ENSG00000124721|chr6:38949468-38949469|-/T|frameshift_variant', 'DNAH8|p.V3263Sfs*23|1|0.17|ENSG00000124721|chr6:38918047-38918048|-/A|frameshift_variant'] 84950 12981 QEEKERVL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 54.94 2 -3.5783708401281387 0.4739503826702805 1.0 ['ENSG00000145911|ENST00000274605|N4BP3'] 109435 3700 TDGSRETP True PC9_epitope_Rep4 861.38282472961 861.38172993586 20.368 2 -3.5814280823861084 0.4739503826702805 1.0 ['ENSG00000111203|ENST00000228799|ITFG2'] 74604 17760 NGGGGGGGP True PC9_epitope_Rep1 628.25650201768 628.25595496793 73.111 1 -3.588376445183416 0.4739503826702805 1.0 ['nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27'] 105474 5978 SRWEPYDHE True PC9_epitope_Rep1 1217.51015050105 1217.50904993586 27.809 2 -3.5914805531581235 0.4739503826702805 1.0 ['FAM50A|p.P329H|1|0.11|ENSG00000071859|chrX:154450294-154450294|C/A|missense_variant'] 139236 25464 YLGRPKKEKT True PC9_epitope_Rep1 1218.7084563847798 1218.70734993586 102.93 2 -3.5919899312698855 0.4739503826702805 1.0 ['ENST00000529480.1_1_11:57457792-57467500:+|nuORF', 'ZDHHC5|p.G609Afs*6|1|0.23|ENSG00000156599|chr11:57699261-57699261|G/-|frameshift_variant', 'nc|ENSG00000156599|Q9C0B5-2|ZDHHC5', 'ENSG00000156599|ENST00000287169|ZDHHC5'] 64450 25244 LPPKLRRQKAT True PC9_epitope_Rep2 1306.8197381692598 1306.81864993586 102.77 2 -3.5937616652633757 0.4739503826702805 1.0 ['ENSG00000179715|ENST00000546455|PCED1B'] 81490 13518 PLGPGKKV True PC9_epitope_Rep5 794.5014237406599 794.50032993586 57.019 2 -3.595257265563044 0.4739503826702805 1.0 ['WDR11|p.S195L|1|0.06|ENSG00000120008|chr10:120862792-120862792|C/T|missense_variant'] 135468 18908 WIFFIMVFV True NCI_RA007_Epitope_Rep5 1200.64056006576 1200.63892490379 79.571 3 -3.605143767220698 0.4739771547248183 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 69207 19010 LTSLRKLWLMH True NCI_RA007_Epitope_Rep2 1396.8013112238 1396.80020993586 78.798 2 -3.606144592935975 0.4739771547248183 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B'] 93503 13072 RQKQYRWKEWN True H1975_Epitope_Rep3 1620.82734273084 1620.82624993586 55.523 2 -3.6085146281070863 0.4739771547248183 1.0 ['ALOX5|p.M146K|1|0.11|ENSG00000012779|chr10:45412196-45412196|T/A|missense_variant'] 92070 24715 RKVKKKRIL True PC9_epitope_Rep5 1167.82918065415 1167.82753490379 100.2 3 -3.644183603859251 0.47403615521197834 1.0 ['ENST00000404867.7_1_5:168093318-168093375:-|nuORF'] 77432 20883 NSLKQRAP True PC9_epitope_Rep5 912.5141136826799 912.5130099358599 85.379 2 -3.646907036928418 0.47403615521197834 1.0 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2', 'ENST00000537834.5_1_19:40745726-40771198:-|nuORF', 'ENST00000487537.2_1_19:40747718-40761168:-|nuORF'] 28248 25309 FRKKRVGS True PC9_epitope_Rep2 976.5930327097198 976.5924849679301 103.03 1 -3.649279927933064 0.47403615521197834 1.0 ['ENST00000393802.6_1_5:171326080-171326947:-|nuORF'] 91256 22383 RGGPVRVA True PC9_epitope_Rep5 810.4824196315799 810.48132993586 91.108 2 -3.6524976700730356 0.47403615521197834 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 138032 14419 YFYPRLLDTVK True NCI_RA007_Epitope_Rep1 1413.7656369077297 1413.76452993586 60.13 2 -3.6691182120003485 0.47403615521197834 1.0 ['chr21:41427866-41430594|126|11.75|0.5|4.57|+|0|TE_info:Charlie2b,Charlie2b_dup3470,hAT-Charlie,DNA,acceptor,+,41430594,41430715|MX1,None|1'] 61551 23591 LKGWWQKFRL True PC9_epitope_Rep5 1360.77681072812 1360.77627496793 95.724 1 -3.670089103692628 0.47403615521197834 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7'] 48749 5313 KDGLPGHPGQ True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 25.825 2 -3.6768703963831313 0.47403615521197834 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'nc|ENSG00000060718|P12107-4|COL11A1', 'nc|ENSG00000130635|P20908-2|COL5A1', 'ENSG00000130635|ENST00000371817|COL5A1', 'COL11A1|p.G1480Dfs*18|1|0.17|ENSG00000060718|chr1:102889480-102889480|C/-|frameshift_variant', 'nc|ENSG00000060718|P12107-3|COL11A1', 'ENSG00000060718|ENST00000370096|COL11A1', 'nc|ENSG00000060718|P12107-2|COL11A1'] 129639 22345 VRPHFPIYL True PC9_epitope_Rep4 1140.64439957624 1140.64276490379 94.186 3 -3.688252893746692 0.4740525386771883 1.0 ['ENST00000306353.7_2_2:85829070-85829145:-|nuORF'] 133228 23740 VVSRAAES True PC9_epitope_Rep2 817.4293809992099 817.42828993586 96.787 2 -3.690100258551115 0.4740525386771883 1.0 ['ENST00000496198.1_1_11:132202560-132205037:+|nuORF'] 102633 15775 SLWRRLRSRQR True PC9_epitope_Rep2 1512.88619501964 1512.8850899358602 65.942 2 -3.6946215016064636 0.4740525386771883 1.0 ['ENST00000308027.6_1_17:6939675-6939873:+|nuORF'] 126225 25032 VLGNKPAT True PC9_epitope_Rep5 798.4599528515 798.45940496793 101.42 1 -3.709324924899617 0.474059615644175 1.0 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 93578 6664 RQLWWYHWICW True NCI_RA007_Epitope_Rep1 1675.78705814199 1675.78540490379 29.933 3 -3.7113654762612125 0.474059615644175 1.0 ['SGMS1|p.R303Q|1|0.26|ENSG00000198964|chr10:50308136-50308136|C/T|missense_variant'] 39012 4904 HHQYEQHWYKD True NCI_RA007_Epitope_Rep2 1569.67492441037 1569.67382993586 23.697 2 -3.714549932898592 0.474059615644175 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2'] 95204 8965 RVKEYFSWLYY True H1975_Epitope_Rep3 1552.77145056416 1552.7703499358602 39.479 2 -3.717672830320443 0.474059615644175 1.0 ['ENSG00000196542|ENST00000620149|SPTSSB'] 92502 15859 RLWWYHWICWL True H1975_Epitope_Rep3 1660.81254461384 1660.81144993586 66.451 2 -3.7182193852416168 0.474059615644175 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 99298 19530 SHRVEMPRQN True PC9_epitope_Rep5 1252.6094877028397 1252.60838993586 80.174 2 -3.7243961643203605 0.474059615644175 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'TNIK|p.P670Qfs*14|1|0.22|ENSG00000154310|chr3:171125916-171125916|G/-|frameshift_variant'] 61657 25213 LKRKQRRYRTT True PC9_epitope_Rep2 1504.9062617578797 1504.9051699358602 102.65 2 -3.7246320772865262 0.474059615644175 1.0 ['ENSG00000004848|ENST00000379044|ARX'] 98125 25389 SESKKLKVS True PC9_epitope_Rep2 1004.5866099165999 1004.58607496793 103.34 1 -3.732144746210713 0.47406507610207854 1.0 ['AXDND1|p.W459Lfs*7|1|0.18|ENSG00000162779|chr1:179430493-179430494|-/T|frameshift_variant', 'ENSG00000162779|ENST00000367618|AXDND1'] 3334 9127 AGGKVLRE True PC9_epitope_Rep5 828.4817509252399 828.48064993586 40.053 2 -3.73688221377301 0.4740705364465993 1.0 ['nc|ENSG00000029153|Q8WYA1-4|BMAL2', 'nc|ENSG00000029153|Q8WYA1-5|BMAL2', 'nc|ENSG00000029153|Q8WYA1-2|BMAL2', 'ENSG00000029153|ENST00000266503|BMAL2'] 73975 5042 NCTFFFFF True PC9_epitope_Rep2 1071.4524249429098 1071.45132993586 24.763 2 -3.7597423309742886 0.4740967607973422 1.0 ['ENST00000478856.5_1_3:100067842-100068019:+|nuORF'] 86340 7887 QIYHEKQRREL True PC9_epitope_Rep5 1498.80045927666 1498.7988149037901 35.28 3 -3.782108160086835 0.47412298460356517 1.0 ['ENSG00000100221|ENST00000683374|JOSD1'] 118972 9301 VAEANRLRDS True PC9_epitope_Rep4 1129.58398414765 1129.58233490379 43.384 3 -3.7918666339142937 0.474123521900273 1.0 ['ENST00000443959.1_1_1:151254484-151254514:+|nuORF'] 6083 5815 APLPHQRKGEN True PC9_epitope_Rep5 1245.65781779425 1245.65617490379 27.359 3 -3.7956077462474367 0.474123521900273 1.0 ['ENST00000590474.5_1_17:67411013-67501942:+|nuORF'] 88224 18674 QSCRRNVKYR True PC9_epitope_Rep5 1308.68332134944 1308.68167490379 76.85 3 -3.8279150934910597 0.4741562769259517 1.0 ['nc|ENSG00000185760|Q9NR82-4|KCNQ5', 'KCNQ5|p.C184Lfs*6|1|0.23|ENSG00000185760|chr6:73041990-73041991|-/C|frameshift_variant', 'nc|ENSG00000185760|Q9NR82-5|KCNQ5', 'nc|ENSG00000185760|Q9NR82-2|KCNQ5', 'ENSG00000185760|ENST00000370398|KCNQ5', 'nc|ENSG00000185760|Q9NR82-7|KCNQ5', 'nc|ENSG00000185760|Q9NR82-3|KCNQ5', 'nc|ENSG00000185760|Q9NR82-6|KCNQ5'] 133192 10096 VVRTDSVK True PC9_epitope_Rep2 902.5185303567799 902.51798496793 44.167 1 -3.83489001143664 0.4741562769259517 1.0 ['NR4A3|p.L367V|1|0.09|ENSG00000119508|chr9:99833299-99833299|C/G|missense_variant'] 94376 17820 RRRRAEWAGRK True NCI_RA007_Epitope_Rep3 1440.82868014352 1440.82702490379 78.138 3 -3.836837008903957 0.4741562769259517 1.0 ['ENST00000262160.10_3_18:45423005-45423077:-|nuORF'] 83745 20092 PVHFGFVP True PC9_epitope_Rep6 898.4701236123799 898.46902993586 89.959 2 -3.8505167441105383 0.4741562769259517 1.0 ['ENST00000518120.1_1_5:179314742-179315312:-|nuORF'] 91111 15935 RFRRQQWKLFQ True NCI_RA007_Epitope_Rep2 1591.8847980373096 1591.88370993586 66.703 2 -3.8519730680341397 0.4741562769259517 1.0 ['ENSG00000072840|ENST00000264956|EVC'] 116382 18512 TTGTASGG True PC9_epitope_Rep5 650.2871334396199 650.28658496793 76.23 1 -3.8589913906320596 0.4741562769259517 1.0 ['TECTA|p.D2032Ifs*79|1|0.16|ENSG00000109927|chr11:121187923-121187923|G/-|frameshift_variant', 'ENSG00000109927|ENST00000392793|TECTA', 'TECTA|p.K805Sfs*19|1|0.3|ENSG00000109927|chr11:121129679-121129679|G/-|frameshift_variant', 'TECTA|p.W188C|1|0.24|ENSG00000109927|chr11:121113149-121113149|G/T|missense_variant'] 9762 19824 AYIFIHRKWK True NCI_RA007_Epitope_Rep4 1360.7768107281202 1360.7751749037902 85.689 3 -3.869853362391609 0.47415681348683186 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1', 'ENSG00000172954|ENST00000379509|LCLAT1', 'nc|ENSG00000172954|Q6UWP7|LCLAT1'] 136794 5622 WYYEATSEW True PC9_epitope_Rep1 1233.4978544818498 1233.4967499358602 26.451 2 -3.880585001474431 0.47415681348683186 1.0 ['ENSG00000159063|ENST00000299626|ALG8', 'nc|ENSG00000159063|Q9BVK2-2|ALG8'] 39924 7845 HPGYGAGT True PC9_epitope_Rep5 758.33475233838 758.33364993586 35.119 2 -3.8899512106823653 0.4741781113429458 1.0 ['ENSG00000179409|ENST00000319004|GEMIN4'] 122149 22922 VGAGHGAG True PC9_epitope_Rep1 624.29797290684 624.29742496793 92.969 1 -3.8901584658242316 0.4741781113429458 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 87013 19543 QMLMKLVS True NCI_RA007_Epitope_Rep2 948.5136453004799 948.51254993586 80.959 2 -3.896252495990548 0.47417864742824517 1.0 ['EPHA5|p.E279Kfs*143|1|0.14|ENSG00000145242|chr4:65601717-65601717|G/-|frameshift_variant'] 88696 13654 QTGTPQRTV True PC9_epitope_Rep5 986.5145076055 986.51340993586 57.543 2 -3.9045380311421196 0.47417864742824517 1.0 ['TAF4|p.L982Ffs*89|1|0.19|ENSG00000130699|chr20:61998160-61998161|-/G|frameshift_variant', 'ENSG00000130699|ENST00000252996|TAF4', 'TAF4|p.T712Pfs*2|1|0.36|ENSG00000130699|chr20:62006600-62006600|G/-|frameshift_variant'] 79864 24929 PEKLKLLA True NCI_RA007_Epitope_Rep1 910.5851533646199 910.5846049679301 103.17 1 -3.91096773026923 0.47418410563029395 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 35496 13026 GSNGVDHRSY True PC9_epitope_Rep2 1090.47918472594 1090.47808993586 55.385 2 -3.9141384025520614 0.474189563719028 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.V1542Ifs*15|1|0.11|ENSG00000196159|chr4:125321025-125321026|-/CCATCAG|frameshift_variant'] 58149 12778 LEKQKQMCGP True PC9_epitope_Rep5 1160.5682000544798 1160.5671099358601 54.159 2 -3.9331676900632058 0.47422616205443335 1.0 ['ENST00000542701.1_1_12:121013443-121013646:+|nuORF'] 116458 9181 TTLPGLFSFY True NCI_RA007_Epitope_Rep4 1144.580461907 1144.57936993586 42.155 2 -3.9636112394931544 0.4742501297353399 1.0 ['ENST00000295770.3_1_3:31678315-31678555:+|nuORF'] 52978 24471 KPGRKDTIT True PC9_epitope_Rep2 1014.5821932424999 1014.58108993586 99.715 2 -3.9723356441655535 0.4742501297353399 1.0 ['ENSG00000188316|ENST00000341276|ENO4'] 54440 18050 KYFSGPEPQA True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 74.444 2 -3.9730471975853394 0.4742501297353399 1.0 ['ENST00000575787.1_1_17:6802758-6803315:+|nuORF'] 65714 12005 LSCGRKNP True PC9_epitope_Rep1 873.4490708979699 873.44796993586 51.039 2 -3.975987767803998 0.4742501297353399 1.0 ['nc|ENSG00000088305|Q9UBC3-4|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-3|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-5|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-2|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-6|DNMT3B', 'ENSG00000088305|ENST00000328111|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-7|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-8|DNMT3B'] 43616 7446 IGVFVLCWFP True PC9_epitope_Rep2 1179.61507359391 1179.61342490379 34.017 3 -3.9791311293858236 0.4742501297353399 1.0 ['ENSG00000274286|ENST00000620793|ADRA2B'] 61116 25329 LIIIKDLLLLI True NCI_RA007_Epitope_Rep3 1278.8890465156999 1278.8874149037902 109.46 3 -3.97921097467421 0.4742501297353399 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 61115 24785 LIIIKDLLLLI True NCI_RA007_Epitope_Rep3 1278.8890465156999 1278.8874149037902 107.17 3 -3.9822526433266856 0.4742501297353399 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 30862 20793 GAPPAHAP True PC9_epitope_Rep2 716.3605731634 716.36002496793 85.422 1 -3.9827899561231708 0.4742501297353399 1.0 ['ENSG00000196976|ENST00000357360|LAGE3'] 77179 15446 NRRWKRWNLVC True NCI_RA007_Epitope_Rep1 1529.8150042253299 1529.81390993586 64.162 2 -3.9917342431842346 0.4742501297353399 1.0 ['chr16:89199816-89200130|114|36.05|0.59|5.94|-|0|SLC22A31,None|1'] 129849 21990 VRRRMERRKEK True NCI_RA007_Epitope_Rep5 1542.90013083162 1542.8984849037902 91.718 3 -3.9967548351846665 0.4742501297353399 1.0 ['ENST00000477976.5_1_1:892338-892489:-|nuORF'] 68356 7296 LTEMWYWIFLW True NCI_RA007_Epitope_Rep3 1586.76319437958 1586.76208993586 35.808 2 -3.998555427330964 0.4742501297353399 1.0 ['ENSG00000205269|ENST00000379426|TMEM170B'] 65199 18604 LQRLFKRQHQ True NCI_RA007_Epitope_Rep1 1352.77893598644 1352.7778299358602 76.503 2 -3.999070762804907 0.4742501297353399 1.0 ['ENSG00000198873|ENST00000392870|GRK5'] 65484 8252 LRLFQYNYPYW True NCI_RA007_Epitope_Rep1 1561.77178491733 1561.7706899358602 36.097 2 -4.013444627662143 0.47425558634575665 1.0 ['ENSG00000108576|ENST00000650711|SLC6A4', 'nc|ENSG00000108576|P31645-2|SLC6A4'] 21559 25144 ERPHSRYLR True PC9_epitope_Rep5 1212.64758746372 1212.64648993586 101.86 2 -4.020488503797449 0.4742610428429093 1.0 ['ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-2|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4'] 14232 5154 DSHSAVSGNAQ True PC9_epitope_Rep2 1071.45811492819 1071.45700993586 25.202 2 -4.028141776687276 0.4742664992268015 1.0 ['ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'nc|ENSG00000119321|Q5T1M5-3|FKBP15'] 49670 24466 KGPKELDTR True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 99.697 2 -4.047073484756965 0.47429816823205856 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 37142 6285 GVQDQAREKHV True PC9_epitope_Rep5 1265.6476470333698 1265.64601490379 29.152 3 -4.052439594319581 0.47429816823205856 1.0 ['ENSG00000242950|ENST00000603053|ERVW-1'] 52464 26362 KKTFNHIR True PC9_epitope_Rep5 1042.60359739342 1042.60250993586 107.26 2 -4.054776540252038 0.47429870170304184 1.0 ['TAT|p.P55H|1|0.52|ENSG00000198650|chr16:71576252-71576252|G/T|missense_variant'] 20334 6502 ENVQRNLKH True PC9_epitope_Rep2 1136.6050539454 1136.60341490379 30.424 3 -4.061493780741822 0.47429870170304184 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.E3154Kfs*5|1|0.32|ENSG00000084674|chr2:21007408-21007408|C/-|frameshift_variant'] 61849 17029 LLAYFILM True NCI_RA007_Epitope_Rep4 982.5561617354599 982.55506993586 73.787 2 -4.0783584150910945 0.4743145353784844 1.0 ['ENSG00000114638|ENST00000264234|UPK1B'] 130523 4859 VSQQKHQL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 23.731 2 -4.087706323386174 0.4743199908674851 1.0 ['ENST00000269159.7_1_18:11999083-11999119:+|nuORF'] 90303 12867 REERRWCWIWI True H1975_Epitope_Rep1 1631.8143355189898 1631.8132299358601 54.562 2 -4.116222396407582 0.47438771274387714 1.0 ['ENST00000482384.1_1_1:109756594-109756711:+|nuORF'] 12443 21585 DIWIIYEQVII True PC9_epitope_Rep2 1403.7700535818299 1403.76894993586 88.499 2 -4.125896494683609 0.4743931673602391 1.0 ['EMC2|p.M60I|1|0.49|ENSG00000104412|chr8:108450453-108450453|G/T|missense_variant'] 93908 25407 RRFRPKLH True PC9_epitope_Rep5 1108.6730143659197 1108.6719099358602 102.96 2 -4.130358553765943 0.47439423027032634 1.0 ['MPPED2|p.V243F|1|0.35|ENSG00000066382|chr11:30414267-30414267|C/A|missense_variant'] 69209 17772 LTSLRKLWLMH True NCI_RA007_Epitope_Rep5 1396.8013112238 1396.80020993586 75.146 2 -4.169815479981202 0.47439423027032634 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B'] 123669 23883 VGQRLRSPRRA True PC9_epitope_Rep5 1294.7694339318998 1294.76832993586 96.847 2 -4.170051104017313 0.47439423027032634 1.0 ['ENST00000492837.1_1_7:102004828-102016337:+|nuORF'] 61656 24730 LKRKQRRYRTT True NCI_RA007_Epitope_Rep5 1504.9062617578797 1504.9051699358602 102.61 2 -4.17130416155049 0.47439423027032634 1.0 ['ENSG00000004848|ENST00000379044|ARX'] 79090 24391 PALLVLLFC True PC9_epitope_Rep2 987.5827108364699 987.58160993586 99.387 2 -4.177997054136431 0.4744018096167016 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.Q116Nfs*29|1|0.28|ENSG00000126259|chr19:35858540-35858540|C/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 102066 22155 SLRARGVP True PC9_epitope_Rep5 854.50863437942 854.50808496793 90.257 1 -4.178928456288631 0.4744018096167016 1.0 ['SLC29A4|p.G44S|1|0.2|ENSG00000164638|chr7:5287946-5287946|G/A|missense_variant'] 31150 23136 GAVTHRPAP True PC9_epitope_Rep5 904.4878989348398 904.4873549679301 93.981 1 -4.195600561508333 0.4744018096167016 1.0 ['ENST00000392607.7_2_10:134901465-134902304:+|nuORF'] 135856 5995 WPFVCWWRYWW True NCI_RA007_Epitope_Rep4 1713.7703454486898 1713.7692499358602 29.678 2 -4.195756978411609 0.4744018096167016 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 141017 21297 YSKQPFRR True PC9_epitope_Rep5 1080.58286194884 1080.5817699358602 86.971 2 -4.2143240367937 0.4744018096167016 1.0 ['PCDH7|p.R792Kfs*13|1|0.19|ENSG00000169851|chr4:30920280-30920281|-/A|frameshift_variant', 'ENSG00000169851|ENST00000695919|PCDH7'] 73665 18181 MYIPILFL True NCI_RA007_Epitope_Rep5 1008.5718117995999 1008.57070993586 76.741 2 -4.217470495008682 0.4744018096167016 1.0 ['ENST00000509089.1_1_4:62453105-62542754:+|nuORF'] 55895 10839 LAQKPNKP True PC9_epitope_Rep5 894.5287011176599 894.52760993586 46.679 2 -4.229868641080547 0.4744018096167016 1.0 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1'] 123126 6948 VGKNARLPS True PC9_epitope_Rep4 940.5454138109599 940.54430993586 33.962 2 -4.234466030409228 0.4744018096167016 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 132678 22022 VVGNGHRL True PC9_epitope_Rep2 850.4773342511401 850.47622993586 90.179 2 -4.240650125270774 0.4744018096167016 1.0 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4'] 39341 23317 HKALRLLHRC True PC9_epitope_Rep5 1245.72406396261 1245.72241490379 94.668 3 -4.247217249686461 0.47440726329442284 1.0 ['ENSG00000179532|ENST00000254579|DNHD1', 'DNHD1|p.W3855Cfs*7|1|0.28|ENSG00000179532|chr11:6567073-6567073|G/-|frameshift_variant', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 57494 26866 LEDKIPRHVI True PC9_epitope_Rep5 1218.70845638478 1218.70734993586 109.73 2 -4.288365894040998 0.4744137787922806 1.0 ['ENST00000333017.6_1_2:99863168-99871557:-|nuORF'] 38543 10093 HESPDSAAP True PC9_epitope_Rep5 909.38282472961 909.38172993586 43.805 2 -4.292129548416773 0.4744137787922806 1.0 ['ENST00000258439.7_1_2:96920659-96920731:-|nuORF'] 121238 17664 VETDQRKM-[Oxidation] True PC9_epitope_Rep5 1021.4862446327699 1021.48514993586 72.958 2 -4.293433682869655 0.4744137787922806 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 22714 18964 ETSCDDTA True PC9_epitope_Rep2 840.2807277298399 840.27962993586 78.308 2 -4.296835128927181 0.4744137787922806 1.0 ['ENST00000518114.1_1_2:190619886-190627438:-|nuORF', 'nc|ENSG00000128694|Q9H4B0-3|OSGEPL1', 'ENST00000524043.1_1_2:190618786-190626366:-|nuORF', 'nc|ENSG00000128694|Q9H4B0-2|OSGEPL1', 'ENSG00000128694|ENST00000264151|OSGEPL1'] 59888 19661 LGGGAAHA True PC9_epitope_Rep2 652.3292730351201 652.32872496793 81.011 1 -4.3038634238475435 0.4744137787922806 1.0 ['ENSG00000171532|ENST00000302584|NEUROD2'] 100651 8607 SLDHSVKGK True PC9_epitope_Rep1 969.5243440132099 969.52324993586 37.943 2 -4.327544278897986 0.47443998298419815 1.0 ['ENSG00000163519|ENST00000295756|TRAT1'] 39410 25400 HKRYKIQKKVR True PC9_epitope_Rep1 1482.9259345732999 1482.92482993586 102.67 2 -4.373609438244761 0.4744716391894836 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 65999 24209 LSEAHAAC True PC9_epitope_Rep4 800.34868815036 800.34758993586 101.6 2 -4.3751656523717575 0.4744716391894836 1.0 ['ENSG00000132702|ENST00000255039|HAPLN2'] 93405 6164 RQDWPMFYHDF True NCI_RA007_Epitope_Rep1 1540.65576918892 1540.65412490379 28.013 3 -4.382084223220217 0.4744721689059501 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 123792 20333 VGRKTALH True PC9_epitope_Rep2 880.52428444356 880.52318993586 83.633 2 -4.383881876677999 0.4744721689059501 1.0 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF'] 120976 2676 VEPKQELK True PC9_epitope_Rep5 969.5494961318898 969.54838993586 14.799 2 -4.385173775018012 0.4744726986004337 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10', 'nc|ENSG00000170325|Q9NQV6-2|PRDM10', 'nc|ENSG00000170325|Q9NQV6-1|PRDM10', 'nc|ENSG00000170325|Q9NQV6-5|PRDM10'] 93502 24463 RQKQNKYPI True PC9_epitope_Rep5 1173.66184054553 1173.66019490379 99.164 3 -4.397057902225876 0.4744726986004337 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1'] 16237 14048 EEERRRQEDYW True PC9_epitope_Rep2 1594.7124321178997 1594.71132993586 59.316 2 -4.451958370109332 0.4744989002780429 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 113359 22598 TLRRYKRHYKL True PC9_epitope_Rep5 1532.90519912872 1532.90410993586 91.921 2 -4.452537206197663 0.4745098039215686 1.0 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000520731.1_1_5:153832004-153835585:+|nuORF'] 5351 25209 ALRRKERERRN True PC9_epitope_Rep2 1482.8603741946197 1482.85926993586 102.63 2 -4.452830081034057 0.4745098039215686 1.0 ['nc|ENSG00000144218|P51826-2|AFF3', 'ENSG00000144218|ENST00000672756|AFF3', 'AFF3|p.V696Wfs*13|1|0.12|ENSG00000144218|chr2:99593576-99593576|G/-|frameshift_variant'] 69070 11004 LTQQQRDV True PC9_epitope_Rep5 986.5145076054998 986.51340993586 47.315 2 -4.489924848066115 0.4745567532238487 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 253 9749 AAGEGACHRDP True PC9_epitope_Rep5 1082.45634110638 1082.4552499358601 42.47 2 -4.505511277930636 0.4745725786372313 1.0 ['ENST00000592982.2_1_19:33794203-33794776:+|nuORF'] 11418 3957 DETSYRQE True PC9_epitope_Rep4 1026.42541781758 1026.4243299358602 21.439 2 -4.516686096776187 0.47457802952496553 1.0 ['ENSG00000010626|ENST00000443597|LRRC23'] 29954 11536 FWFLMYPFRFH True NCI_RA007_Epitope_Rep2 1589.76419743909 1589.76310993586 49.464 2 -4.529308036056821 0.4745785569790964 1.0 ['ENSG00000147138|ENST00000645147|GPR174'] 87536 20927 QQKEQELQQTL True NCI_RA007_Epitope_Rep1 1371.6994078227096 1371.6983099358602 85.641 2 -4.534720253879836 0.4745785569790964 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 135737 14212 WLWRKWLIQYF True NCI_RA007_Epitope_Rep1 1637.8870894530899 1637.8859899358602 59.317 2 -4.555391758888376 0.47458400763517156 1.0 ['ENST00000356721.3_1_16:48396017-48396254:-|nuORF'] 123793 20347 VGRKTALH True PC9_epitope_Rep5 880.52428444356 880.52318993586 83.301 2 -4.575659084220108 0.47460528226726695 1.0 ['nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6', 'nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF'] 58661 14974 LERHMEDTHP True PC9_epitope_Rep1 1263.56661983135 1263.56552993586 62.418 2 -4.581872334772528 0.47460528226726695 1.0 ['ENSG00000129675|ENST00000250617|ARHGEF6', 'nc|ENSG00000129675|Q15052-2|ARHGEF6'] 45618 9268 IRCCHGSV True PC9_epitope_Rep1 873.39492715013 873.39382993586 40.502 2 -4.600461055010381 0.47460633596813345 1.0 ['ENST00000472509.5_1_7:99709442-99709594:-|nuORF'] 82883 15040 PRWKRYRRWMK True PC9_epitope_Rep5 1661.9201380002098 1661.9185049037899 62.855 3 -4.6016480431834506 0.47460633596813345 1.0 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 83 21283 AAALRQQQ True PC9_epitope_Rep2 884.4828135544001 884.48170993586 87.327 2 -4.612604354458339 0.47460633596813345 1.0 ['NEFH|p.P567Qfs*42|1|0.13|ENSG00000100285|chr22:29489337-29489337|C/-|frameshift_variant', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH'] 47675 4168 IWSMMMLLSF True NCI_RA007_Epitope_Rep5 1257.5959950254498 1257.59488993586 22.553 2 -4.639230645757846 0.47460633596813345 1.0 ['FER1L6|p.A33Hfs*38|1|0.12|ENSG00000214814|chr8:123963298-123963298|G/-|frameshift_variant'] 52647 23777 KLRRKRNFRLR True PC9_epitope_Rep5 1541.9855151380898 1541.9844099358602 96.44 2 -4.645462338422582 0.4746068627857765 1.0 ['GPR139|p.S214R|1|0.13|ENSG00000180269|chr16:20032155-20032155|G/T|missense_variant'] 9795 15182 AYKQRRDKLYV True PC9_epitope_Rep5 1438.80448202794 1438.80283490379 63.406 3 -4.645499816893791 0.4746068627857765 1.0 ['nc|ENSG00000125850|Q9BRP0-2|OVOL2', 'ENSG00000125850|ENST00000278780|OVOL2', 'ENST00000483661.5_1_20:18005282-18039681:-|nuORF'] 96113 12389 RYMRTWLEPLS True H1975_Epitope_Rep3 1450.73910489006 1450.7380099358602 52.842 2 -4.667266467900369 0.474634637126469 1.0 ['ENSG00000180806|ENST00000303450|HOXC9'] 25705 20728 FERQQWRRQRD True H1975_Epitope_Rep3 1603.8080042685897 1603.8069099358602 86.613 2 -4.6894008067277015 0.474634637126469 1.0 ['ENSG00000128408|ENST00000614167|RIBC2'] 85629 17197 QGKRKTSI True PC9_epitope_Rep5 916.54541381096 916.54430993586 71.168 2 -4.689805918302514 0.474634637126469 1.0 ['ENSG00000102362|ENST00000372989|SYTL4', 'ENST00000372981.1_1_X:99941666-99941798:-|nuORF'] 135215 12576 WEWRYRLYRRM True NCI_RA007_Epitope_Rep1 1713.8674337210098 1713.8663299358602 52.898 2 -4.696788241656616 0.474634637126469 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 18477 16128 EKEERRDWLKR True PC9_epitope_Rep4 1543.8219229972299 1543.8202649037903 69.975 3 -4.6983834779740885 0.474634637126469 1.0 ['TCHH|p.Q451K|1|0.24|ENSG00000159450|chr1:152111866-152111866|G/T|missense_variant'] 60712 25476 LHQKITAT True PC9_epitope_Rep5 910.52361573722 910.52250993586 103.24 2 -4.699825622198746 0.474634637126469 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000586052.5_1_17:76475094-76487566:-|nuORF'] 136666 9849 WWRYWWHYPIC True H1975_Epitope_Rep3 1694.76050904098 1694.75940993586 42.914 2 -4.700232934846561 0.474634637126469 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 87617 21410 QQQKKKLS True PC9_epitope_Rep6 986.5872786229398 986.58618993586 95.227 2 -4.7119740313410885 0.4746504584491557 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.N1652Tfs*30|1|0.17|ENSG00000214814|chr8:124101166-124101166|C/-|frameshift_variant', 'FER1L6|p.R1073Gfs*13|1|0.1|ENSG00000214814|chr8:124061918-124061918|G/-|frameshift_variant', 'FER1L6|p.P815Hfs*14|1|0.15|ENSG00000214814|chr8:124035429-124035429|C/-|frameshift_variant'] 85626 12104 QGKLAAAK True PC9_epitope_Rep5 785.47593726881 785.47484993586 51.549 2 -4.722230380007568 0.4746559073983799 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENSG00000197978|ENST00000618348|GOLGA6L9', 'ENSG00000278662|ENST00000610657|GOLGA6L10', 'ENSG00000213047|ENST00000620048|DENND1B'] 66480 22505 LSHAHPPG True PC9_epitope_Rep5 814.4085859849799 814.40803496793 91.57 1 -4.778022335677395 0.47471321592299875 1.0 ['ENST00000565166.2_1_15:95399162-95399906:+|nuORF'] 102147 23171 SLRQQLRER True PC9_epitope_Rep5 1184.6738022115599 1184.6727099358602 94.109 2 -4.789312915041107 0.47473448390308665 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 80463 22723 PGKTTAGSV True PC9_epitope_Rep5 816.4341320264799 816.43302993586 92.408 2 -4.792576617794268 0.47473448390308665 1.0 ['ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF', 'nc|ENSG00000149115|Q9C0C2-2|TNKS1BP1'] 98123 7577 SESKAREL True PC9_epitope_Rep1 918.4770594676199 918.47596993586 33.964 2 -4.820803765552596 0.4747355320472931 1.0 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 65485 7924 LRLFQYNYPYW True NCI_RA007_Epitope_Rep2 1561.77178491733 1561.7706899358602 35.454 2 -4.82380556665902 0.4747355320472931 1.0 ['ENSG00000108576|ENST00000650711|SLC6A4', 'nc|ENSG00000108576|P31645-2|SLC6A4'] 115728 10717 TSALSKKP True PC9_epitope_Rep5 830.48616759934 830.48506993586 46.213 2 -4.831272868984276 0.4747355320472931 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENSG00000135314|ENST00000257765|KHDC1'] 40532 12776 HREWGSHNCYH True PC9_epitope_Rep5 1424.5792502037202 1424.5781499358602 54.152 2 -4.835579941919492 0.4747355320472931 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 130280 15954 VSGRAALR True PC9_epitope_Rep5 828.49298431528 828.49188993586 66.356 2 -4.840178890990495 0.4747409796621068 1.0 ['nc|ENSG00000072110|P12814-4|ACTN1'] 131513 19466 VTKLSPEKKP True PC9_epitope_Rep5 1125.6757592741699 1125.67466993586 79.929 2 -4.866808150464165 0.47474642716392523 1.0 ['ENSG00000143867|ENST00000272223|OSR1'] 61503 12770 LKEFKRNDHDD True PC9_epitope_Rep5 1415.67934108447 1415.67769490379 54.129 3 -4.896664432704843 0.4747676926906164 1.0 ['ENSG00000077235|ENST00000356183|GTF3C1', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'GTF3C1|p.V966Wfs*31|1|0.13|ENSG00000077235|chr16:27492694-27492694|C/-|frameshift_variant', 'GTF3C1|p.Q531Afs*10|1|0.16|ENSG00000077235|chr16:27506079-27506080|-/T|frameshift_variant'] 62098 19375 LLECRHRPC True PC9_epitope_Rep5 1125.5535530498498 1125.55189490379 79.573 3 -4.90584602660208 0.4747676926906164 1.0 ['nc|ENSG00000102103|O60828-8|PQBP1'] 124294 21118 VGTNGGLK True PC9_epitope_Rep5 744.41300265908 744.4124549679301 86.292 1 -4.910123513551402 0.47476821604131664 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.Y2033Tfs*17|1|0.26|ENSG00000145934|chr5:168247035-168247035|C/-|frameshift_variant'] 107069 5215 SVGRRCKRICP True PC9_epitope_Rep5 1273.6859642017298 1273.68430490379 25.077 3 -4.913283034302589 0.47476821604131664 1.0 ['ENST00000411689.6_1_6:46620850-46623676:+|nuORF'] 97999 22192 SEPVRVHN True PC9_epitope_Rep5 936.4777281739599 936.47662993586 90.383 2 -4.929810262729409 0.47476926267758995 1.0 ['ENSG00000138780|ENST00000515279|GSTCD', 'nc|ENSG00000138780|Q8NEC7-3|GSTCD', 'ENST00000484843.1_1_4:106638770-106744253:+|nuORF'] 132764 19755 VVIQRSQRKC True PC9_epitope_Rep5 1215.6870097475498 1215.68590993586 81.033 2 -4.931933257507569 0.47476926267758995 1.0 ['ENST00000546469.5_3_21:30677551-30693608:+|nuORF'] 80528 9522 PGPHGPNG True PC9_epitope_Rep5 731.33508669155 731.33453496793 41.586 1 -4.9336459160303985 0.47476926267758995 1.0 ['COL5A2|p.P1223Sfs*19|1|0.15|ENSG00000204262|chr2:189039530-189039531|-/A|frameshift_variant', 'COL5A2|p.I1474Sfs*2|1|0.2|ENSG00000204262|chr2:189034151-189034151|G/-|frameshift_variant', 'ENSG00000204262|ENST00000374866|COL5A2'] 34590 9625 GPTGDPVK True PC9_epitope_Rep5 769.39701824177 769.39592993586 41.988 2 -4.950384672366269 0.47476926267758995 1.0 ['ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 46810 15594 ITHEGRTALRP True PC9_epitope_Rep5 1249.68911792253 1249.68748490379 64.991 3 -4.9568011202506765 0.474785079486887 1.0 ['ENSG00000215041|ENST00000399464|NEURL4', 'nc|ENSG00000215041|Q96JN8-2|NEURL4'] 124382 15997 VGVAHRIH True PC9_epitope_Rep5 887.5089687325899 887.50786993586 66.522 2 -4.97294556823892 0.4748346156238983 1.0 ['nc|ENSG00000119242|Q53HC0-2|CCDC92', 'ENSG00000119242|ENST00000238156|CCDC92'] 71508 16090 LYYRRAHRRFV True PC9_epitope_Rep5 1535.85858328947 1535.85637987172 66.878 4 -4.986162129273454 0.4748346156238983 1.0 ['ENSG00000116898|ENST00000373116|MRPS15', 'ENST00000477040.1_1_1:36921391-36921985:-|nuORF', 'ENST00000488606.5_1_1:36921391-36923601:-|nuORF'] 84162 6901 PYHSPEDSR True PC9_epitope_Rep1 1086.47303671634 1086.47192993586 31.35 2 -4.995826312883148 0.4748346156238983 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2'] 80131 23152 PFPIFISFL True NCI_RA007_Epitope_Rep5 1079.60555445603 1079.6044499358602 96.31 2 -5.004741726477765 0.4748346156238983 1.0 ['ENST00000560775.5_2_15:44957989-44959306:-|nuORF'] 90517 17393 RELRRRWLKDQ True PC9_epitope_Rep1 1554.8855263132998 1554.88442993586 71.705 2 -5.021968827753467 0.4748346156238983 1.0 ['nc|ENSG00000165264|O95139-2|NDUFB6', 'ENSG00000165264|ENST00000379847|NDUFB6'] 3197 13596 AGEHHSPSSL True PC9_epitope_Rep5 1020.46247203264 1020.46136993586 57.322 2 -5.0233573390421835 0.4748346156238983 1.0 ['TBX19|p.G439E|1|0.25|ENSG00000143178|chr1:168312971-168312971|G/A|missense_variant'] 96114 12993 RYMRTWLEPLS True NCI_RA007_Epitope_Rep2 1450.73910489006 1450.7380099358602 55.165 2 -5.026089043270462 0.4748346156238983 1.0 ['ENSG00000180806|ENST00000303450|HOXC9'] 90304 12870 REERRWCWIWI True H1975_Epitope_Rep3 1631.8143355189898 1631.8132299358601 54.728 2 -5.046626795200569 0.4748346156238983 1.0 ['ENST00000482384.1_1_1:109756594-109756711:+|nuORF'] 38738 6929 HGKEDIKV True PC9_epitope_Rep5 924.5028802926399 924.50178993586 31.622 2 -5.078385710529817 0.4748346156238983 1.0 ['ENSG00000132915|ENST00000255266|PDE6A'] 126441 24098 VLKRKKKLKKK True PC9_epitope_Rep1 1396.0129586725495 1396.0118699358602 97.505 2 -5.083528992684765 0.4748346156238983 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 91958 8265 RKPEGSPV True PC9_epitope_Rep5 868.4766655447999 868.47556993586 36.732 2 -5.095333357266796 0.4748346156238983 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 37945 9082 HAAKTSKL True PC9_epitope_Rep5 854.49740098938 854.49630993586 39.881 2 -5.146485732156459 0.4748711674253186 1.0 ['nc|ENSG00000164904|P49419-4|ALDH7A1', 'ENSG00000164904|ENST00000409134|ALDH7A1'] 96488 18218 SAATPAHTS True PC9_epitope_Rep5 841.3929954904901 841.39188993586 75.088 2 -5.1511309313214575 0.47487661233461903 1.0 ['ENST00000527207.1_1_11:57089273-57089784:-|nuORF'] 61114 24690 LIIIKDLLLLI True NCI_RA007_Epitope_Rep3 1278.8890465156999 1278.8874149037902 106.77 3 -5.1695774867147435 0.4749027943387423 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 54218 19841 KVWLSVLFIF True NCI_RA007_Epitope_Rep5 1250.7427166351797 1250.7416099358602 83.229 2 -5.173726793784093 0.47490823880720817 1.0 ['ENSG00000152661|ENST00000282561|GJA1', 'GJA1|p.R299Afs*49|1|0.28|ENSG00000152661|chr6:121447741-121447741|C/-|frameshift_variant'] 121452 12139 VEWWGLVIL True PC9_epitope_Rep2 1113.62226714933 1113.62116993586 52.003 2 -5.191616357936422 0.4749136831627733 1.0 ['ENST00000486831.5_1_3:138189538-138191915:+|nuORF'] 96799 23424 SAQLLPVLLLH True PC9_epitope_Rep6 1202.7386938839 1202.7375899358601 103.21 2 -5.220537713179086 0.47492949568679493 1.0 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 30724 13907 GALHPDRPQ True PC9_epitope_Rep4 989.50427727497 989.50318993586 61.397 2 -5.236008188508638 0.47493053539584457 1.0 ['ENST00000305123.5_1_2:227661928-227662057:-|nuORF'] 4926 10826 ALGAANRGPR True PC9_epitope_Rep5 981.54681079329 981.54570993586 46.63 2 -5.274640861599353 0.47493053539584457 1.0 ['nc|ENSG00000150281|Q16619-2|CTF1', 'ENSG00000150281|ENST00000279804|CTF1'] 43134 12195 IFASRQTGKHT True PC9_epitope_Rep5 1244.66256882152 1244.6614699358602 51.898 2 -5.276398528078551 0.47493053539584457 1.0 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 99253 9686 SHPNGPGP True PC9_epitope_Rep5 761.34565137525 761.34454993586 42.225 2 -5.278445018608928 0.47493053539584457 1.0 ['ENST00000428826.6_1_17:40852687-40852948:-|nuORF'] 82275 25095 PPGHEPGS True PC9_epitope_Rep5 776.3453170220799 776.34420993586 101.67 2 -5.340606198326569 0.4749981856448218 1.0 ['ENST00000376227.3_1_X:49093621-49098531:+|nuORF'] 112750 15051 TLHKSVVK True PC9_epitope_Rep1 910.5600012459399 910.55890993586 62.711 2 -5.361570327403418 0.4750554668546665 1.0 ['ENSG00000135951|ENST00000393483|TSGA10', 'ENST00000489546.5_1_2:99635091-99688291:-|nuORF'] 37541 6021 GVVGNKPR True PC9_epitope_Rep5 825.4820852784098 825.48098993586 28.153 2 -5.396502145052913 0.4750570184532449 1.0 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF', 'ENSG00000100056|ENST00000252137|ESS2'] 33634 6837 GLGKKCPA True PC9_epitope_Rep5 772.4265445482399 772.42544993586 31.27 2 -5.400920729752872 0.4750570184532449 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'CACNA1B|p.L1889Cfs*5|1|0.13|ENSG00000148408|chr9:138115565-138115565|C/-|frameshift_variant', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 80149 21115 PFRRHDSI True PC9_epitope_Rep5 1026.5359117564199 1026.53480993586 86.284 2 -5.421174462568305 0.4750570184532449 1.0 ['ENSG00000165195|ENST00000333590|PIGA'] 83731 7946 PVGSAAEK True PC9_epitope_Rep5 757.3970182417701 757.39646496793 35.503 1 -5.435055521819254 0.4750570184532449 1.0 ['ENST00000240100.6_1_8:29192157-29192256:-|nuORF'] 91877 23118 RKKRFEKQ True PC9_epitope_Rep5 1118.6672602791398 1118.6661699358601 93.911 2 -5.443224531575628 0.4750570184532449 1.0 ['ENSG00000164695|ENST00000297265|CHMP4C'] 61588 13705 LKKLETRE True PC9_epitope_Rep5 1015.60259433391 1015.6020749679301 57.743 1 -5.460689819490685 0.4750570184532449 1.0 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 93134 23566 RPPGGGGG True PC9_epitope_Rep5 653.32452200785 653.3239749679301 95.631 1 -5.485836288552335 0.475083194244306 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 123238 23174 VGLGRKRSSRS True PC9_epitope_Rep5 1201.7003513125699 1201.69924993586 94.12 2 -5.498613168837994 0.475088635939541 1.0 ['ENST00000353703.8_2_20:43514450-43530178:+|nuORF', 'ENST00000428262.1_3_20:43514450-43516249:+|nuORF', 'ENST00000372839.7_2_20:43514450-43530188:+|nuORF'] 81946 22654 PLSTARRV True PC9_epitope_Rep5 898.5348491272599 898.53374993586 92.139 2 -5.508948761019763 0.4750995189915409 1.0 ['ENST00000372562.1_1_1:42922065-42925274:+|nuORF'] 121243 19358 VETDQRKM True PC9_epitope_Rep4 1005.4913296327699 1005.49022993586 82.571 2 -5.518607497024739 0.4750995189915409 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 341 10646 AAIKGNQESVK True PC9_epitope_Rep5 1143.62478633047 1143.62368993586 45.937 2 -5.565402517884307 0.4751464261649303 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 100546 16931 SLCCHCHS True PC9_epitope_Rep1 888.3040635404002 888.30296993586 69.948 2 -5.610451167966047 0.47516921833051734 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 100547 17030 SLCCHCHS True PC9_epitope_Rep1 888.3040635404002 888.30296993586 70.33 2 -5.613179882184834 0.47516921833051734 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 74032 12590 NDISHRLR True PC9_epitope_Rep5 1009.5417254128499 1009.54062993586 53.427 2 -5.617267535813384 0.47516921833051734 1.0 ['ENSG00000187135|ENST00000335523|VSTM2B'] 100549 17311 SLCCHCHS True PC9_epitope_Rep1 888.3040635404002 888.30296993586 71.403 2 -5.617873801841278 0.47516921833051734 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 129764 21950 VRRAPAVS True PC9_epitope_Rep5 854.50863437942 854.50752993586 89.472 2 -5.621334130743706 0.47516921833051734 1.0 ['ENST00000264235.12_2_3:119812650-119812956:-|nuORF'] 80786 23334 PHLERIREK True PC9_epitope_Rep5 1176.6727395823998 1176.6716499358602 94.736 2 -5.6459310780113094 0.47516921833051734 1.0 ['RYR2|p.I4893*|1|0.2|ENSG00000198626|chr1:237830548-237830548|G/-|frameshift_variant', 'RYR2|p.E4912Sfs*11|1|0.48|ENSG00000198626|chr1:237830607-237830607|G/-|frameshift_variant', 'ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.L3731Tfs*8|1|0.12|ENSG00000198626|chr1:237756331-237756332|-/T|frameshift_variant', 'RYR2|p.G4180Afs*11|1|0.16|ENSG00000198626|chr1:237784250-237784250|G/-|frameshift_variant', 'RYR2|p.F4198Lfs*14|1|0.24|ENSG00000198626|chr1:237784303-237784303|C/-|frameshift_variant', 'RYR2|p.R3414Efs*39|1|0.33|ENSG00000198626|chr1:237711751-237711751|A/-|frameshift_variant', 'RYR2|p.N3207Kfs*49|1|0.52|ENSG00000198626|chr1:237706985-237706986|-/T|frameshift_variant', 'RYR2|p.K1840Sfs*6|1|0.05|ENSG00000198626|chr1:237614645-237614645|G/-|frameshift_variant', 'RYR2|p.A2213Lfs*22|1|0.25|ENSG00000198626|chr1:237633654-237633654|A/-|frameshift_variant', 'RYR2|p.Q1498Kfs*30|1|0.28|ENSG00000198626|chr1:237595550-237595550|G/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.H4754Lfs*3|1|0.21|ENSG00000196218|chr19:38578005-38578006|-/T|frameshift_variant', 'RYR2|p.L1658Sfs*49|1|0.23|ENSG00000198626|chr1:237614100-237614100|C/-|frameshift_variant'] 72470 9625 MKYKKKCVK True PC9_epitope_Rep5 1154.66679189694 1154.6651549037902 41.988 3 -5.647991639016627 0.47516921833051734 1.0 ['nc|ENSG00000056736|Q9NRM6-2|IL17RB', 'ENST00000475124.1_1_3:53880615-53891834:+|nuORF', 'ENSG00000056736|ENST00000288167|IL17RB'] 81115 12973 PKDISDDH True PC9_epitope_Rep1 925.4141248578901 925.41302993586 54.773 2 -5.6508773856731045 0.47516921833051734 1.0 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000358711.7_1_20:62571331-62572425:-|nuORF'] 135021 5334 WDERETRRP True PC9_epitope_Rep5 1243.6057822213897 1243.60414490379 25.529 3 -5.680148610620229 0.47519097816059785 1.0 ['NID2|p.S393R|1|0.06|ENSG00000087303|chr14:52053831-52053831|T/G|missense_variant'] 87030 9980 QMRRKHYYRSY True PC9_epitope_Rep5 1586.78884904714 1586.78719490379 43.363 3 -5.694975719497845 0.47519097816059785 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 105760 24759 SSGGGGGG True PC9_epitope_Rep5 534.2034038156601 534.2028549679301 100.37 1 -5.711771616334503 0.47519097816059785 1.0 ['ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000133265|ENST00000433386|HSPBP1', 'nc|ENSG00000133265|Q9NZL4-2|HSPBP1', 'ENST00000369842.8_1_X:153609605-153609698:+|nuORF', 'KRT9|p.G138Efs*8|1|0.15|ENSG00000171403|chr17:41571580-41571581|-/T|frameshift_variant', 'ENST00000545606.5_1_12:67663381-67663543:+|nuORF', 'ENST00000532700.2_16:18911356-18937378:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000511242.1_1_5:112783941-112824318:-|nuORF', 'ENSG00000171444|ENST00000408903|MCC', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'KCNMA1|p.N449Tfs*33|1|0.09|ENSG00000156113|chr10:77086584-77086584|G/-|frameshift_variant', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'ALK|p.C1259Vfs*103|1|0.13|ENSG00000171094|chr2:29209848-29209848|G/-|frameshift_variant', 'ENSG00000171094|ENST00000389048|ALK', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000157106|ENST00000446231|SMG1', 'MN1|p.Q1193Rfs*19|1|0.47|ENSG00000169184|chr22:27796968-27796968|C/-|frameshift_variant', 'ENSG00000169184|ENST00000302326|MN1', 'ENSG00000171403|ENST00000246662|KRT9', 'ENSG00000179168|ENST00000334928|GGN', 'nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENSG00000203782|ENST00000368742|LORICRIN', 'ENSG00000206557|ENST00000383763|TRIM71', 'ENSG00000275023|ENST00000621332|MLLT6', 'nc|ENSG00000136807|P50750-2|CDK9'] 93997 25035 RRKKVNHHFLS True PC9_epitope_Rep5 1420.8163841243202 1420.8152899358602 101.44 2 -5.7174513989278015 0.47519097816059785 1.0 ['ENST00000489108.1_1_1:22084083-22109432:-|nuORF'] 108870 6120 TAAGEKLKS True PC9_epitope_Rep5 903.50254593947 903.50144993586 28.526 2 -5.762297250191225 0.47521714795082814 1.0 ['RHOXF2B|p.G74Afs*98|1|0.18|ENSG00000203989|chrX:120077147-120077147|C/-|frameshift_variant', 'ENSG00000203989|ENST00000371402|RHOXF2B', 'ENSG00000131721|ENST00000371388|RHOXF2'] 13570 4856 DPEACDKETGR True PC9_epitope_Rep5 1219.51391555215 1219.51280993586 23.72 2 -5.76942902538357 0.4752225872987904 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.T1586Nfs*4|1|0.56|ENSG00000091136|chr7:107929194-107929195|-/T|frameshift_variant', 'LAMB1|p.T1586Kfs*11|1|0.15|ENSG00000091136|chr7:107929194-107929195|-/TT|frameshift_variant'] 136370 20544 WTIFLFLRWVL True NCI_RA007_Epitope_Rep5 1492.8594777229198 1492.85782490379 85.963 3 -5.782869110267816 0.4752383913764511 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 79740 10998 PDYPKRED True PC9_epitope_Rep5 1018.47197408718 1018.47086993586 47.292 2 -5.829303392193933 0.4753321863145457 1.0 ['ENST00000406608.2_1_7:5016050-5028783:+|nuORF', 'ENST00000493407.5_1_7:5016050-5024561:+|nuORF', 'ENSG00000011275|ENST00000389902|RNF216', 'nc|ENSG00000011275|Q9NWF9|RNF216'] 16200 6736 EEEEERRYYRR True PC9_epitope_Rep5 1613.7546312830498 1613.75241987172 30.881 4 -5.8302967966147605 0.4753321863145457 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000533424.5_1_11:67770773-67771486:-|nuORF'] 138963 13960 YKKSALQQR True PC9_epitope_Rep1 1120.63529144452 1120.6341899358601 58.533 2 -5.846853558141648 0.4753376242446856 1.0 ['ENST00000470597.5_1_5:64558740-64769500:-|nuORF', 'nc|ENSG00000049192|Q9UKP5-3|ADAMTS6', 'nc|ENSG00000049192|Q9UKP5-2|ADAMTS6', 'ADAMTS6|p.D907Ifs*38|1|0.24|ENSG00000049192|chr5:65188207-65188207|C/-|frameshift_variant', 'ENSG00000049192|ENST00000381055|ADAMTS6', 'nc|ENSG00000049192|Q9UKP5-4|ADAMTS6'] 90968 24998 RFALKRKRSR True PC9_epitope_Rep5 1316.8265548851998 1316.8254499358602 101.31 2 -5.857253704239458 0.47535342647485596 1.0 ['ENST00000555952.5_1_14:52037074-52045767:+|nuORF'] 18684 7104 ELAGANRQ True PC9_epitope_Rep5 857.4355290088099 857.43442993586 32.294 2 -5.908092619543992 0.47538995698813286 1.0 ['nc|nan|Q8WYQ4-2|C22orf15'] 84098 20597 PWNFPFRRSYW True H1975_Epitope_Rep3 1554.75205253226 1554.75094993586 86.083 2 -5.927542674547877 0.4753953941504467 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 129498 11223 VRKKEEPA True PC9_epitope_Rep5 955.5450794577898 955.5439899358599 48.159 2 -5.959567080193484 0.4754062681369704 1.0 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 127486 23787 VNLLRHHKS True PC9_epitope_Rep5 1102.63596015086 1102.63486993586 96.477 2 -5.968217200332055 0.4754062681369704 1.0 ['nc|ENSG00000132704|Q96LA5-4|FCRL2', 'nc|ENSG00000132704|Q96LA5-3|FCRL2', 'nc|ENSG00000132704|Q96LA5-2|FCRL2', 'ENST00000368178.3_1_1:157716528-157737507:-|nuORF'] 53754 23291 KSRRSLPT True PC9_epitope_Rep5 943.5563128478299 943.55520993586 94.572 2 -5.978162045683426 0.4754067779044461 1.0 ['HOXA13|p.Q244Hfs*91|1|0.52|ENSG00000106031|chr7:27199346-27199346|C/-|frameshift_variant'] 94074 25490 RRLKHFPR True PC9_epitope_Rep5 1108.67301436592 1108.67247496793 103.3 1 -6.0018335132453355 0.4754067779044461 1.0 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 90807 16474 RESRYEEEEEQ True PC9_epitope_Rep5 1482.6222797008202 1482.62118993586 68.365 2 -6.006894559613918 0.47541221461068905 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H'] 44550 23683 ILNLCKVFFVR True NCI_RA007_Epitope_Rep4 1350.7845985305 1350.7835099358601 102.71 2 -6.018101011874766 0.4754176512042449 1.0 ['ENST00000331925.6_1_17:79477027-79477201:-|nuORF'] 13169 15719 DLRRRDYHMER True PC9_epitope_Rep5 1545.7582771948498 1545.75716993586 65.466 2 -6.047772553133905 0.47543345113117014 1.0 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF'] 70071 10084 LVNHQRIHTGE True PC9_epitope_Rep5 1302.6792815148199 1302.67818993586 43.771 2 -6.072801724794938 0.4754601226993865 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 133605 21301 VYADGIFDLF True NCI_RA007_Epitope_Rep4 1158.55972646242 1158.5586299358602 92.339 2 -6.0781841038183115 0.4754601226993865 1.0 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF'] 129532 27386 VRKSLGRG True PC9_epitope_Rep5 871.5351834804299 871.53408993586 112.28 2 -6.087881431223307 0.4754601226993865 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 114174 23391 TPKRRRLWR True PC9_epitope_Rep5 1267.7737910363498 1267.7726899358602 94.958 2 -6.131116926005165 0.4755380996300403 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 48518 15899 KAKDRFRVP True PC9_epitope_Rep5 1115.65636124227 1115.6552699358601 66.146 2 -6.153330332512015 0.47554896941937225 1.0 ['ENSG00000155657|ENST00000589042|TTN', 'TTN|p.M33497Tfs*20|1|0.13|ENSG00000155657|chr2:178531195-178531204|GACGGTCATG/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.Y32365Ifs*13|1|0.22|ENSG00000155657|chr2:178534599-178534600|-/T|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'TTN|p.E30848Gfs*21|1|0.11|ENSG00000155657|chr2:178542289-178542290|CT/-|frameshift_variant', 'TTN|p.I31744Sfs*58|1|0.31|ENSG00000155657|chr2:178536956-178536956|T/-|frameshift_variant', 'TTN|p.S29122Afs*5|1|0.29|ENSG00000155657|chr2:178549339-178549339|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.E25782*|1|0.06|ENSG00000155657|chr2:178563852-178563865|AGGGCCTGTACCTC/-|frameshift_variant', 'TTN|p.L21315*|1|0.73|ENSG00000155657|chr2:178577470-178577470|C/-|frameshift_variant', 'TTN|p.P18175Qfs*3|1|0.07|ENSG00000155657|chr2:178592558-178592558|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'TTN|p.I20968Yfs*9|1|0.08|ENSG00000155657|chr2:178579205-178579206|-/A|frameshift_variant'] 18685 7196 ELAGANRQ True PC9_epitope_Rep5 857.4355290088099 857.43442993586 32.645 2 -6.17452941054121 0.47554896941937225 1.0 ['nc|nan|Q8WYQ4-2|C22orf15'] 52405 9812 KKQITDHTV True PC9_epitope_Rep5 1068.5927579262 1068.5916699358602 42.709 2 -6.212403259087643 0.47556527325858533 1.0 ['nc|ENSG00000057294|Q99959|PKP2'] 85605 11932 QGIKGKVG True PC9_epitope_Rep5 785.4759372688098 785.47484993586 50.894 2 -6.2224827339165465 0.47556527325858533 1.0 ['ENSG00000081052|ENST00000396625|COL4A4'] 42702 21308 IEKKGGGG True PC9_epitope_Rep5 744.4130026590798 744.4124549679301 87.015 1 -6.229293817958496 0.47556527325858533 1.0 ['ENSG00000150594|ENST00000280155|ADRA2A'] 11343 12611 DENEKQERL True PC9_epitope_Rep5 1159.5469299325898 1159.5452849037902 53.509 3 -6.251659534766137 0.47558107001854866 1.0 ['ADCY1|p.L707Wfs*35|1|0.37|ENSG00000164742|chr7:45686005-45686005|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1'] 72936 10619 MPYCQRKRK True PC9_epitope_Rep5 1208.6270523432797 1208.6254049037902 45.833 3 -6.275169097347625 0.47558701013408494 1.0 ['ENST00000505573.2_1_5:19233806-19234037:+|nuORF'] 100566 16416 SLCCHCHS True PC9_epitope_Rep5 888.3040635404002 888.30296993586 68.145 2 -6.277884304472429 0.47558701013408494 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 28040 25653 FQRKKKRKG True PC9_epitope_Rep1 1174.7410939257397 1174.7399899358602 103.71 2 -6.282401583681248 0.47558701013408494 1.0 ['ENST00000487412.5_1_13:33712982-33859775:-|nuORF'] 27378 16815 FLVFLLMM True NCI_RA007_Epitope_Rep5 1012.5489681800399 1012.54786993586 71.426 2 -6.290490196314218 0.4755924440714145 1.0 ['ENST00000531428.1_1_11:17099415-17121458:-|nuORF', 'ENST00000265970.11_1_11:17115925-17118806:-|nuORF'] 28045 27552 FQRKRKSRRYY True PC9_epitope_Rep5 1586.8906116937399 1586.8889549037901 113.2 3 -6.355172686813405 0.47561518934880587 1.0 ['ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 142366 18736 YYEKDPKR True PC9_epitope_Rep4 1097.5505587610498 1097.54997496793 80.151 1 -6.361893831903057 0.47561518934880587 1.0 ['ENSG00000068976|ENST00000164139|PYGM'] 35450 14216 GSHHQLQSA True PC9_epitope_Rep5 963.45224170211 963.45114993586 59.687 2 -6.372301380822918 0.47561518934880587 1.0 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930'] 100570 17191 SLCCHCHS True PC9_epitope_Rep5 888.3040635404002 888.30296993586 71.145 2 -6.37489541307364 0.47561518934880587 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 52434 23238 KKRRKKKKSKG True PC9_epitope_Rep5 1370.9310199537397 1370.9299299358602 94.368 2 -6.382577522083837 0.47561518934880587 1.0 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2', 'METAP2|p.R73Nfs*9|1|0.13|ENSG00000111142|chr12:95476135-95476136|-/AACTTAC|frameshift_variant'] 52452 5264 KKSKYKNRYW True PC9_epitope_Rep5 1399.77245362367 1399.7707949037901 25.264 3 -6.387907863181121 0.47561518934880587 1.0 ['ENST00000479790.2_1_13:22067163-22067286:-|nuORF'] 92435 23735 RLRLRKERVSD True PC9_epitope_Rep5 1426.84807817542 1426.84642490379 96.277 3 -6.402386428674518 0.47561518934880587 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 64548 23429 LPRTPERQKP True PC9_epitope_Rep5 1220.6989543302398 1220.6978499358602 95.101 2 -6.402484190092653 0.47561518934880587 1.0 ['ZNF324B|p.Q188L|1|0.36|ENSG00000249471|chr19:58455507-58455507|A/T|missense_variant'] 86374 22245 QKCRLRVS True PC9_epitope_Rep5 988.5600183292798 988.55892993586 90.573 2 -6.4112385337607 0.47563098346388166 1.0 ['ENST00000479212.5_1_3:113627916-113664322:+|nuORF', 'nc|ENSG00000178075|Q8IYS0-2|GRAMD1C', 'ENSG00000178075|ENST00000358160|GRAMD1C'] 136137 10208 WRRADGKPIAR True PC9_epitope_Rep5 1324.7476358581598 1324.74598490379 44.254 3 -6.437886957098857 0.4756364163826062 1.0 ['ENSG00000144619|ENST00000418658|CNTN4', 'CNTN4|p.R342Kfs*7|1|0.07|ENSG00000144619|chr3:2900766-2900767|-/CAAAAGTACACTT|frameshift_variant', 'CNTN4|p.G444Efs*5|1|0.82|ENSG00000144619|chr3:2925747-2925747|G/-|frameshift_variant', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 133571 21406 VWVPFIYSF True NCI_RA007_Epitope_Rep3 1156.59571804832 1156.5946299358602 93.037 2 -6.45441839293228 0.4756423539162868 1.0 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 35449 14304 GSHHQLQSA True PC9_epitope_Rep1 963.45224170211 963.45114993586 59.845 2 -6.456028801004622 0.4756423539162868 1.0 ['FLG|p.H2392Ifs*27|1|0.38|ENSG00000143631|chr1:152307712-152307712|G/-|frameshift_variant', 'FLG|p.V3031Wfs*37|1|0.09|ENSG00000143631|chr1:152305795-152305796|-/CA|frameshift_variant', 'FLG|p.V3031Tfs*38|1|0.08|ENSG00000143631|chr1:152305796-152305797|-/TCGTG|frameshift_variant', 'FLG|p.H3724Mfs*55|1|0.42|ENSG00000143631|chr1:152303716-152303716|G/-|frameshift_variant', 'FLG|p.R4026Gfs*9|1|0.25|ENSG00000143631|chr1:152302785-152302810|TTATTAATATACGTTGCATAATACCT/-|frameshift_variant', 'ENSG00000143631|ENST00000368799|FLG', 'CON__P20930'] 3051 8514 AFSKNSQPKQS True PC9_epitope_Rep5 1220.61494992276 1220.61331490379 37.691 3 -6.461856990911189 0.4756423539162868 1.0 ['PCSK1|p.P680Q|1|0.35|ENSG00000175426|chr5:96393224-96393224|G/T|missense_variant'] 65524 23517 LRQHKESL True PC9_epitope_Rep1 1009.5668775315299 1009.56578993586 95.245 2 -6.480456744418683 0.47564778649205874 1.0 ['nc|ENSG00000231852|P08686-2|CYP21A2', 'ENSG00000231852|ENST00000644719|CYP21A2'] 45942 16633 ISEKKYRQP True PC9_epitope_Rep5 1147.6349570913499 1147.63386993586 68.985 2 -6.53335770211548 0.4756966746089299 1.0 ['NEB|p.K5728Rfs*13|1|0.22|ENSG00000183091|chr2:151524602-151524603|TT/-|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.M3546Dfs*13|1|0.05|ENSG00000183091|chr2:151614513-151614514|-/T|frameshift_variant', 'NEB|p.T2960Ifs*23|1|0.29|ENSG00000183091|chr2:151639867-151639868|-/A|frameshift_variant'] 81261 25070 PKRYSIDRH True PC9_epitope_Rep5 1170.62578938998 1170.62468993586 101.57 2 -6.53629584001943 0.4756966746089299 1.0 ['CDH11|p.I417K|1|0.29|ENSG00000140937|chr16:64982051-64982051|A/T|missense_variant'] 15604 7316 EARNASPRV True PC9_epitope_Rep5 998.5257409955399 998.52464993586 33.102 2 -6.536958847371772 0.4756966746089299 1.0 ['ENST00000508458.2_1_5:41870176-41871044:+|nuORF'] 95462 20409 RWLMLLILALW True NCI_RA007_Epitope_Rep5 1426.8522841674999 1426.85062490379 85.436 3 -6.546907366491107 0.4756966746089299 1.0 ['ENST00000505241.1_1_5:176950198-176951252:-|nuORF'] 32583 21011 GGGYGGQS True PC9_epitope_Rep5 681.2718177286499 681.27126496793 85.876 1 -6.548125776154823 0.4756966746089299 1.0 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000515481.5_1_5:179043097-179043181:-|nuORF', 'ENST00000502632.5_1_5:179042549-179043984:-|nuORF'] 94273 10946 RRREGLSKFN True PC9_epitope_Rep1 1261.7003513125696 1261.69870490379 46.992 3 -6.555340756722009 0.4756966746089299 1.0 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'TOP3A-MYO18A|1|fusion', 'TOP3A-MYO18A|2|fusion', 'ENST00000580713.1_1_17:18212093-18218098:-|nuORF', 'ENST00000582230.5_1_17:18210861-18218098:-|nuORF', 'ENST00000583328.5_1_17:18210081-18218056:-|nuORF'] 100569 16919 SLCCHCHS True PC9_epitope_Rep5 888.3040635404002 888.30296993586 70.095 2 -6.557883450657303 0.4756966746089299 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 123209 22849 VGLEQPRRER True PC9_epitope_Rep5 1238.68436689526 1238.6832699358602 92.884 2 -6.565839019572137 0.4756966746089299 1.0 ['PDE9A|p.G121R|1|0.3|ENSG00000160191|chr21:42731868-42731868|G/A|missense_variant'] 69155 12234 LTRSPLRKNRN True PC9_epitope_Rep5 1353.7953143265697 1353.7942099358602 52.044 2 -6.569535968972891 0.4756966746089299 1.0 ['ENST00000373277.8_1_9:130500670-130500874:-|nuORF'] 37233 23537 GVRGSGSG True PC9_epitope_Rep5 675.33000131111 675.32945496793 95.52 1 -6.575196659581675 0.4756971781378196 1.0 ['ENST00000436944.5_1_7:73098152-73100976:+|nuORF'] 130518 6750 VSQKNESV True PC9_epitope_Rep5 889.4505103666099 889.44940993586 30.935 2 -6.5772966283448975 0.4756971781378196 1.0 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 90769 10304 RERYEDSQQEE True PC9_epitope_Rep5 1467.62261405399 1467.62150993586 44.622 2 -6.581520838023891 0.47570955044541124 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.A1846Vfs*58|1|0.06|ENSG00000137497|chr11:72006171-72006190|GGAGGTGGCTCGCAGGCTAG/-|frameshift_variant', 'NUMA1|p.A1889Gfs*44|1|0.46|ENSG00000137497|chr11:72006055-72006061|ACCCCGG/-|frameshift_variant', 'NUMA1|p.E1044Vfs*52|1|0.15|ENSG00000137497|chr11:72014371-72014372|CT/-|frameshift_variant'] 19457 9267 ELNKHWRR True PC9_epitope_Rep5 1137.6155590594499 1137.6144699358601 40.595 2 -6.618715515522186 0.47570955044541124 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 133606 21305 VYADGIFDLF True NCI_RA007_Epitope_Rep4 1158.55972646242 1158.55917496793 92.357 1 -6.635577186990033 0.47570955044541124 1.0 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF'] 129977 18432 VRVRGSGV True PC9_epitope_Rep5 828.4929843152798 828.49188993586 75.919 2 -6.649668712280728 0.47570955044541124 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 4511 6812 AKELSAVHSSH True PC9_epitope_Rep5 1164.58873517492 1164.5876299358601 31.173 2 -6.654510243544254 0.47570955044541124 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 102917 8024 SPASTVEK True PC9_epitope_Rep5 817.41814760917 817.41704993586 35.803 2 -6.660405773059584 0.47570955044541124 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 87028 9966 QMRRKHYYRSY True PC9_epitope_Rep1 1586.78884904714 1586.78719490379 43.198 3 -6.66132408645123 0.47570955044541124 1.0 ['IL1RAPL1|p.Q621R|1|0.37|ENSG00000169306|chrX:29955591-29955591|A/G|missense_variant'] 123940 6522 VGRVGKNA True PC9_epitope_Rep5 799.46643521427 799.46532993586 30.059 2 -6.668526988630686 0.47570955044541124 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 123939 6311 VGRVGKNA True PC9_epitope_Rep5 799.46643521427 799.46532993586 29.249 2 -6.687263527733751 0.47577713095990304 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 91308 22114 RGRAPTAP True PC9_epitope_Rep5 824.461684187 824.46058993586 90.096 2 -6.773466549481954 0.4758767841236302 1.0 ['ENST00000325888.12_1_7:128470572-128470641:+|nuORF'] 135489 18711 WIMLILVG True NCI_RA007_Epitope_Rep4 943.5564960886298 943.55538993586 80.95 2 -6.80537579004136 0.4758767841236302 1.0 ['ENST00000489322.5_1_22:24226412-24227033:+|nuORF', 'ENST00000461809.5_1_22:24225898-24227033:+|nuORF', 'nc|ENSG00000133460|Q9BYW1|SLC2A11', 'ENSG00000133460|ENST00000316185|SLC2A11', 'nc|ENSG00000133460|Q9BYW1-4|SLC2A11'] 110765 5934 TGHPPGPT True PC9_epitope_Rep5 762.36605246666 762.36494993586 27.82 2 -6.820313216016773 0.4758767841236302 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 68606 22484 LTHQKKKLEGQ True PC9_epitope_Rep5 1308.75138382592 1308.75028993586 91.486 2 -6.825939424567337 0.4758767841236302 1.0 ['ENSG00000173391|ENST00000309539|OLR1', 'nc|ENSG00000173391|P78380-2|OLR1', 'nc|ENSG00000173391|P78380-3|OLR1'] 109851 13349 TEENRHRISKY True PC9_epitope_Rep5 1431.7218746027897 1431.72076993586 56.361 2 -6.83983207787098 0.4758767841236302 1.0 ['ATP13A3|p.L977Wfs*2|1|0.22|ENSG00000133657|chr3:194428862-194428862|A/-|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 122590 23312 VGFFILLRIF True PC9_epitope_Rep2 1223.74305098835 1223.7424749679299 95.145 1 -6.868509552413218 0.47589257045791167 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12'] 135471 11178 WIFRPLYLFFF True NCI_RA007_Epitope_Rep3 1547.8329286219093 1547.83182993586 51.076 2 -6.869849399040386 0.47589899743143593 1.0 ['ENST00000508170.5_1_4:55131036-55131279:+|nuORF'] 59263 15629 LFFPMFDL True PC9_epitope_Rep2 1028.5041261625997 1028.50302993586 65.394 2 -6.891432183565267 0.47589899743143593 1.0 ['ENST00000321437.8_1_15:63556543-63556594:+|nuORF'] 18522 22963 EKIRQLKKKET True PC9_epitope_Rep4 1399.8510978671898 1399.84945490379 96.546 3 -6.894507464465 0.47589899743143593 1.0 ['nc|ENSG00000092853|Q9HAW4-2|CLSPN', 'nc|ENSG00000092853|Q9HAW4-3|CLSPN', 'ENSG00000092853|ENST00000318121|CLSPN'] 106982 9395 SVEKKNENL True PC9_epitope_Rep4 1059.55603806431 1059.5549499358601 43.745 2 -6.909751777280798 0.47589899743143593 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14', 'nc|ENSG00000185842|Q0VDD8-2|DNAH14'] 43800 25390 IHRNKRKVF True PC9_epitope_Rep5 1196.7254438615998 1196.7243499358601 102.89 2 -6.920847757614993 0.47589899743143593 1.0 ['nc|ENSG00000003137|Q9NR63-3|CYP26B1', 'ENSG00000003137|ENST00000001146|CYP26B1'] 39255 7206 HIIQRKHDPRH True PC9_epitope_Rep5 1435.79089765247 1435.78924490379 32.683 3 -6.9757062182112355 0.47604942363261626 1.0 ['nc|ENSG00000164125|Q6UWH4-2|GASK1B', 'ENSG00000164125|ENST00000585682|GASK1B'] 28781 5450 FSTHHPRP True PC9_epitope_Rep5 977.4831479075699 977.48204993586 25.975 2 -7.019155478354721 0.4760755639331359 1.0 ['ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1'] 103062 5821 SPGHCACC True PC9_epitope_Rep5 776.24040065468 776.23985496793 27.384 1 -7.101708272873195 0.47611206048366217 1.0 ['ENST00000437354.1_1_7:3304323-3341903:-|nuORF'] 13150 21275 DLRKDKEQLRK True PC9_epitope_Rep5 1427.8208603680698 1427.8197699358602 86.887 2 -7.132363806116927 0.47611847555923775 1.0 ['nc|ENSG00000139725|Q9HBH0-2|RHOF', 'ENSG00000139725|ENST00000267205|RHOF'] 119101 12893 VAGSACPR True PC9_epitope_Rep5 759.36975794811 759.36866993586 54.603 2 -7.167603298780863 0.47611847555923775 1.0 ['nc|ENSG00000130822|Q6P2M8-5|PNCK'] 113675 16122 TLWRRNAE True PC9_epitope_Rep4 1044.5464764401197 1044.5453699358602 69.953 2 -7.197225516108679 0.47611847555923775 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 40136 13722 HQAAPPAD True PC9_epitope_Rep5 805.37186612309 805.3713149679301 57.808 1 -7.220413525227557 0.47611847555923775 1.0 ['ENST00000219476.7_1_16:2138283-2138505:+|nuORF'] 3388 8543 AGHRSEGPSL True PC9_epitope_Rep5 1009.4941065140899 1009.49300993586 37.805 2 -7.220732954150669 0.47611847555923775 1.0 ['ENST00000407479.5_1_16:3692941-3705863:+|nuORF'] 66291 9936 LSFMLLFSLWR True PC9_epitope_Rep2 1411.7686141131899 1411.76695490379 43.549 3 -7.256154102959084 0.4761401764632782 1.0 ['ENSG00000138115|ENST00000371270|CYP2C8'] 94256 14575 RRQSGAQYG True PC9_epitope_Rep1 1021.5053399041299 1021.50424993586 60.886 2 -7.258006739974164 0.4761401764632782 1.0 ['ENSG00000100380|ENST00000216218|ST13'] 33882 10149 GLPRKRDRKY True PC9_epitope_Rep5 1287.75238688543 1287.75073490379 44.025 3 -7.264376576958626 0.4761401764632782 1.0 ['nc|ENSG00000187801|Q9UJL9-2|ZFP69B', 'ENSG00000187801|ENST00000361584|ZFP69B'] 123135 23546 VGKQDPKRHL True PC9_epitope_Rep1 1176.6727395823998 1176.6716499358602 95.361 2 -7.27738841018744 0.4761401764632782 1.0 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 39563 12823 HLGPEKEEE True PC9_epitope_Rep5 1066.49310345458 1066.49200993586 54.333 2 -7.299025781576731 0.47615595712732356 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000433430.5_1_2:233201010-233201337:+|nuORF'] 113090 16771 TLNRQKYRHVD True PC9_epitope_Rep5 1428.75859446468 1428.7574899358601 69.514 2 -7.364917715058677 0.476166806465977 1.0 ['NPLOC4|p.Q348Rfs*82|1|0.19|ENSG00000182446|chr17:81596194-81596194|G/-|frameshift_variant', 'ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 93434 13416 RQGGGGGG True PC9_epitope_Rep5 644.2990355359999 644.2984849679301 56.621 1 -7.372290124934199 0.476166806465977 1.0 ['ENST00000502492.5_2_17:47007783-47007840:-|nuORF'] 16625 20969 EEQDLRKHC True PC9_epitope_Rep5 1156.5295060466399 1156.52897496793 85.718 1 -7.436323739474691 0.4761702612315052 1.0 ['NLRP12|p.G485C|1|0.35|ENSG00000142405|chr19:53810206-53810206|C/A|missense_variant'] 49796 24051 KHIARLSQKQ True PC9_epitope_Rep1 1207.71493874755 1207.71328490379 97.322 3 -7.473614085850445 0.4761702612315052 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 112956 10980 TLLLWFIWFSN True NCI_RA007_Epitope_Rep5 1438.76490863174 1438.76380993586 48.871 2 -7.527151065313187 0.4761702612315052 1.0 ['ENSG00000166111|ENST00000610966|SVOP'] 125724 25367 VKRPVERRFV True PC9_epitope_Rep5 1284.77787335728 1284.77676993586 102.79 2 -7.531119106765254 0.4761702612315052 1.0 ['ENST00000484680.1_1_2:27551202-27551382:-|nuORF'] 101390 8977 SLKKDSNP True PC9_epitope_Rep5 887.47124581119 887.47014993586 39.473 2 -7.536936167596711 0.4761702612315052 1.0 ['ENST00000538944.1_1_11:68512411-68514777:-|nuORF', 'nc|ENSG00000132749|Q9Y4I5-3|TESMIN', 'nc|ENSG00000132749|Q9Y4I5-2|TESMIN', 'ENSG00000132749|ENST00000255087|TESMIN', 'ENST00000540869.5_1_11:68500318-68517720:-|nuORF'] 10669 5935 CPTGCGCH True PC9_epitope_Rep5 776.2404006546801 776.23985496793 27.824 1 -7.5417860229815465 0.4761702612315052 1.0 ['nc|ENSG00000103091|Q6PJI9-4|WDR59', 'nc|ENSG00000103091|Q6PJI9-3|WDR59', 'ENSG00000103091|ENST00000262144|WDR59'] 15103 24451 DYVPPELITLF True PC9_epitope_Rep2 1305.6856552515299 1305.68454993586 99.626 2 -7.558669845602103 0.4761702612315052 1.0 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 100819 8969 SLEKPNSR True PC9_epitope_Rep5 929.49304388493 929.49194993586 39.442 2 -7.5680444342603606 0.4761702612315052 1.0 ['ENST00000396355.5_1_16:15818316-15818511:+|nuORF'] 91376 5570 RHDLKELR True PC9_epitope_Rep4 1065.60432566941 1065.60322993586 28.194 2 -7.585935142991316 0.4761702612315052 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 138141 7808 YGKNYSQR True PC9_epitope_Rep5 1014.4882928576599 1014.48718993586 34.978 2 -7.642175706307229 0.4761702612315052 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 75587 9219 NLDKERAV True PC9_epitope_Rep5 943.5086939490699 943.50758993586 40.406 2 -7.708275506519166 0.4761702612315052 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 117721 15718 TVVARARG True PC9_epitope_Rep5 828.4929843152798 828.49188993586 65.462 2 -7.7174932107497725 0.4761702612315052 1.0 ['ENST00000233616.8_1_2:74692396-74692498:-|nuORF', 'ENST00000452063.6_1_2:74692055-74692498:-|nuORF', 'ENST00000462443.1_1_2:74690388-74692498:-|nuORF'] 107570 18862 SVPEKGKHGI True PC9_epitope_Rep5 1050.5821932425 1050.58108993586 77.57 2 -7.775510069244202 0.4761702612315052 1.0 ['nc|nan|F2Z3F1|C5orf67'] 139857 22817 YPPFFLLL True PC9_epitope_Rep2 1008.5684406713199 1008.56734993586 93.253 2 -7.777144768271317 0.4761702612315052 1.0 ['ENSG00000180974|ENST00000641726|OR52E4'] 38590 8118 HEYKGCHLAR True PC9_epitope_Rep5 1212.58221032584 1212.58057490379 36.165 3 -7.824428801956394 0.47617075468767794 1.0 ['CON__Q2HJF0'] 59863 10342 LGFVFMLLV True PC9_epitope_Rep2 1037.5983609006098 1037.5972699358601 45.106 2 -7.825189101095901 0.47617075468767794 1.0 ['nc|ENSG00000029364|Q9NUM3-3|SLC39A9', 'nc|ENSG00000029364|Q9NUM3-2|SLC39A9', 'ENSG00000029364|ENST00000336643|SLC39A9', 'ENST00000555245.5_1_14:69865254-69925307:+|nuORF'] 29608 11250 FVIFMFFLN True NCI_RA007_Epitope_Rep5 1176.6041745570399 1176.60253490379 49.915 3 -7.907874636199049 0.4761825880793879 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 107450 14945 SVLTKHKV True PC9_epitope_Rep5 910.5600012459399 910.55890993586 62.488 2 -7.941313085669403 0.4761825880793879 1.0 ['ZNF208|p.W760Cfs*14|1|0.26|ENSG00000160321|chr19:21972754-21972754|C/-|frameshift_variant', 'nc|ENSG00000160321|O43345-2|ZNF208', 'ENSG00000160321|ENST00000397126|ZNF208', 'ZNF208|p.H743Y|1|0.06|ENSG00000160321|chr19:21972807-21972807|G/A|missense_variant'] 95480 11399 RWLWWQPWWWW True NCI_RA007_Epitope_Rep1 1814.8622716875798 1814.86116993586 48.308 2 -8.003899599415472 0.4761825880793879 1.0 ['chr12:54282823-54283827|538|26.53|0.0|21.34|+|1|HNRNPA1,HNRNPA1|1'] 3078 24156 AFYRRRQLMH True PC9_epitope_Rep4 1376.7247922386 1376.7236899358602 101.39 2 -8.007263098181262 0.4761825880793879 1.0 ['nc|ENSG00000071282|Q9NZU5-2|LMCD1', 'ENSG00000071282|ENST00000157600|LMCD1'] 9050 13698 AVHQKQSGL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 57.716 2 -8.016877469206731 0.4761825880793879 1.0 ['ENST00000556905.2_1_15:22016140-22016464:-|nuORF'] 129620 23441 VRPDGQPKP True PC9_epitope_Rep5 992.5403284305199 992.53922993586 95.149 2 -8.020022390779738 0.4761825880793879 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'ATP13A1|p.M861Vfs*15|1|0.11|ENSG00000105726|chr19:19649617-19649618|AT/-|frameshift_variant', 'ENST00000487364.1_1_19:19771386-19774475:-|nuORF'] 36465 20180 GVGGGGHG True PC9_epitope_Rep5 596.26667277856 596.2661249679301 82.67 1 -8.114457945479115 0.4761880111812817 1.0 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 123980 15847 VGSARALR True PC9_epitope_Rep5 828.49298431528 828.49188993586 65.946 2 -8.130326002761738 0.47621414003375057 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 33318 23679 GKPNKRRGF True PC9_epitope_Rep5 1058.6097454030198 1058.60864993586 96.06 2 -8.13694769974938 0.4762609739937055 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 94073 25409 RRLKHFPR True PC9_epitope_Rep5 1108.67301436592 1108.67247496793 102.96 1 -8.161783764538507 0.4762718181253494 1.0 ['LRCH4|p.I585Mfs*23|1|0.24|ENSG00000077454|chr7:100575889-100575892|ATGG/-|frameshift_variant', 'ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 102500 20807 SLVLLVFLGF True PC9_epitope_Rep2 1106.67396836902 1106.67286993586 85.475 2 -8.164324516287127 0.4762718181253494 1.0 ['ENSG00000109066|ENST00000335464|TMEM104', 'nc|ENSG00000109066|Q8NE00-2|TMEM104', 'ENST00000584246.1_1_17:72773463-72781743:+|nuORF'] 122588 18438 VGFFILLRIF True NCI_RA007_Epitope_Rep3 1223.74305098835 1223.7424749679299 80.707 1 -8.200287755243135 0.47628808348085344 1.0 ['nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12'] 20610 6400 EPTLRSRQDRH True PC9_epitope_Rep5 1393.71745792869 1393.71580490379 29.594 3 -8.205944663922338 0.47628808348085344 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 122997 6685 VGIFCILL True NCI_RA007_Epitope_Rep4 876.51429692348 876.5131899358599 32.338 2 -8.214425051273038 0.47628808348085344 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 135530 24188 WKKRKRKAK True PC9_epitope_Rep5 1227.8040285354698 1227.80239490379 98.031 3 -8.360461469136466 0.4763349137663306 1.0 ['ENST00000596373.1_1_19:53683054-53693528:-|nuORF', 'ENST00000597544.5_1_19:53683054-53696636:-|nuORF'] 46438 11790 ISTASRRHF True PC9_epitope_Rep5 1073.5730255411302 1073.57192993586 50.347 2 -8.373548514169949 0.4763403347860744 1.0 ['ENSG00000112695|ENST00000684430|COX7A2'] 26810 15025 FLAFLYAL True NCI_RA007_Epitope_Rep4 956.53714054304 956.53604993586 65.308 2 -8.391129289267985 0.4763561076604555 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 102364 8609 SLSYKDRQ True PC9_epitope_Rep5 995.5036085686299 995.50250993586 38.058 2 -8.409070025500624 0.4763615283485678 1.0 ['ENSG00000175664|ENST00000380473|TEX26'] 45613 10430 IQYTRRRWCKR True PC9_epitope_Rep5 1564.85211801004 1564.85047490379 45.106 3 -8.417217054667542 0.4763669489244529 1.0 ['ASTN1|p.L174Q|1|0.1|ENSG00000152092|chr1:177032800-177032800|A/T|missense_variant'] 79355 6110 PASASQAAGT True PC9_epitope_Rep5 859.4035601741899 859.40246993586 28.489 2 -8.433195896341907 0.4763723693881142 1.0 ['nc|ENSG00000120907|P35348-2|ADRA1A'] 26811 15103 FLAFLYAL True NCI_RA007_Epitope_Rep4 956.53714054304 956.53604993586 65.657 2 -8.484139034573653 0.47637285854769423 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 93133 22705 RPPGGGGG True PC9_epitope_Rep4 653.32452200785 653.3239749679301 95.562 1 -8.495781570895995 0.47637285854769423 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 43233 9534 IFLGLLDFFMP True NCI_RA007_Epitope_Rep5 1311.6937178374299 1311.6926299358602 43.31 2 -8.509020972026747 0.4763782787818562 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 55930 9317 LAREQQRRWV True PC9_epitope_Rep5 1340.74255047772 1340.7409049037901 40.791 3 -8.541708610148127 0.4763787678039086 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 15030 23307 DYLIIFISYV True PC9_epitope_Rep2 1244.6692769114002 1244.66816993586 95.126 2 -8.54720725378431 0.4763787678039086 1.0 ['ENSG00000167355|ENST00000300773|OR51B5'] 100568 16819 SLCCHCHS True PC9_epitope_Rep5 888.3040635404002 888.30296993586 69.704 2 -8.554739526344711 0.47638418780858927 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 100567 16723 SLCCHCHS True PC9_epitope_Rep5 888.3040635404002 888.30296993586 69.331 2 -8.570789511706353 0.47638960770106614 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 91024 5695 RFHPSLRSTRR True PC9_epitope_Rep5 1411.7908976524698 1411.78924490379 26.901 3 -8.7576049828795 0.4764053782695552 1.0 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 128462 14571 VPSEVERSK True PC9_epitope_Rep5 1029.5454733806098 1029.54487496793 61.046 1 -8.85665870613678 0.4764314991926469 1.0 36051 19644 GVAAAGHA True PC9_epitope_Rep5 652.3292730351201 652.32872496793 80.615 1 -8.974775445589582 0.47645761957500543 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 2965 11626 AFFLFMDLF True NCI_RA007_Epitope_Rep5 1149.5568900114497 1149.55525490379 51.371 3 -8.98427925956291 0.47647338894984165 1.0 ['ENST00000380874.3_1_6:1612762-1612825:+|nuORF'] 62685 13505 LLLLLLLL True NCI_RA007_Epitope_Rep5 922.68307650074 922.68196993586 58.631 2 -9.018382716745181 0.4765773784880351 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000129214|ENST00000380450|SHBG', 'PCDHAC2|p.L323Wfs*36|1|0.5|ENSG00000243232|chr5:140967727-140967727|G/-|frameshift_variant', 'nc|ENSG00000129214|P04278-5|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'nc|ENSG00000129214|P04278-4|SHBG', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'CD93|p.D280Vfs*19|1|0.03|ENSG00000125810|chr20:23085354-23085354|T/-|frameshift_variant', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENSG00000125810|ENST00000246006|CD93', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-3|SHBG', 'SEMA6C|p.M8I|1|0.48|ENSG00000143434|chr1:151142598-151142598|C/G|missense_variant', 'EIF2AK3|p.E232Rfs*74|1|0.4|ENSG00000172071|chr2:88593345-88593345|C/-|frameshift_variant', 'ENSG00000184709|ENST00000371542|LRRC26', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'PCDHA8|p.W12G|1|0.22|ENSG00000204962|chr5:140841355-140841355|T/G|missense_variant', 'ENSG00000117899|ENST00000261758|MESD', 'ENSG00000182685|ENST00000328540|BRICD5', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000183971|ENST00000566435|NPW', 'ENSG00000070031|ENST00000176195|SCT', 'ENSG00000178473|ENST00000380433|UCN3', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'nc|ENSG00000117899|Q14696-2|MESD', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'FREM2|p.P2266Lfs*7|1|0.31|ENSG00000150893|chr13:38851739-38851739|C/-|frameshift_variant', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.L1199Pfs*77|1|0.34|ENSG00000114554|chr3:127017824-127017825|-/C|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'PLXNA1|p.G468Vfs*35|1|0.4|ENSG00000114554|chr3:127003350-127003350|C/-|frameshift_variant', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'LILRB2|p.Q558Rfs*3|1|0.18|ENSG00000131042|chr19:54274808-54274808|G/-|frameshift_variant', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ENSG00000166341|ENST00000299441|DCHS1', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Q3985Rfs*5|1|0.49|ENSG00000083857|chr4:186600049-186600049|C/-|frameshift_variant', 'FAT1|p.V4200Ffs*6|1|0.12|ENSG00000083857|chr4:186596942-186596942|C/-|frameshift_variant', 'FAT1|p.G4121Efs*85|1|0.21|ENSG00000083857|chr4:186597688-186597688|C/-|frameshift_variant', 'FAT1|p.H1844Tfs*22|1|0.39|ENSG00000083857|chr4:186621057-186621057|A/-|frameshift_variant', 'FAT1|p.E1039*|1|0.29|ENSG00000083857|chr4:186706713-186706714|-/A|frameshift_variant', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000064601|P10619-2|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000109758|ENST00000382774|HGFAC', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000121316|ENST00000240617|PLBD1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'LRP8|p.P485Rfs*110|1|0.14|ENSG00000157193|chr1:53264370-53264370|G/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'LTBP3|p.L294Sfs*94|1|0.17|ENSG00000168056|chr11:65553515-65553515|G/-|frameshift_variant', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'SORCS2|p.L964Vfs*14|1|0.17|ENSG00000184985|chr4:7728368-7728372|CTCTG/-|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.P599Lfs*10|1|0.48|ENSG00000243232|chr5:140968559-140968559|C/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 58790 23454 LESKRLRS True PC9_epitope_Rep5 987.58252759567 987.58197496793 95.199 1 -9.03616339420661 0.4765773784880351 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 45619 9245 IRCCHGSV True PC9_epitope_Rep5 873.39492715013 873.39382993586 40.508 2 -9.072624931018355 0.4765931461337032 1.0 ['ENST00000472509.5_1_7:99709442-99709594:-|nuORF'] 89715 23399 RAASEKRVKKI True PC9_epitope_Rep5 1284.79900272468 1284.7979099358602 94.985 2 -9.224716207210152 0.47662961352957006 1.0 ['ENSG00000127578|ENST00000319070|WFIKKN1'] 33943 23172 GLSARQRREL True PC9_epitope_Rep5 1184.6738022115599 1184.67214490379 94.112 3 -9.291614861559578 0.47667149658455804 1.0 ['ENST00000586136.5_1_19:30097284-30104129:+|nuORF', 'ENSG00000105171|ENST00000585603|POP4', 'ENST00000588551.5_1_19:30097225-30101540:+|nuORF'] 83564 8021 PVAERPED True PC9_epitope_Rep4 911.4348603024699 911.43376993586 38.303 2 -9.297924928613854 0.47667149658455804 1.0 ['ENSG00000113594|ENST00000453190|LIFR'] 133152 22570 VVQVRTRS True PC9_epitope_Rep4 943.55631284783 943.55520993586 95.053 2 -9.403606745127156 0.47668232907619384 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 127840 3043 VPFFVFFLL True NCI_RA007_Epitope_Rep5 1127.6419399647498 1127.64028490379 16.867 3 -9.44325960435882 0.47668232907619384 1.0 ['nc|ENSG00000184999|Q63ZE4-2|SLC22A10', 'ENSG00000184999|ENST00000332793|SLC22A10'] 37694 5374 GVYKSRAP True PC9_epitope_Rep5 876.4817509252398 876.48064993586 25.684 2 -9.53842821822338 0.4766877451538454 1.0 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B', 'ENST00000468249.1_1_22:50968911-50969740:-|nuORF'] 50096 25476 KKIRQPAA True PC9_epitope_Rep5 910.5712346359799 910.57012993586 103.24 2 -9.623010529426654 0.47670351051498594 1.0 ['ENSG00000115207|ENST00000264720|GTF3C2', 'nc|ENSG00000115207|Q8WUA4-2|GTF3C2'] 36482 10279 GVGHRDARW True PC9_epitope_Rep4 1052.5264097018799 1052.5253099358602 47.225 2 -9.722671397750855 0.47670892626131955 1.0 ['ENST00000587840.5_1_19:10790574-10791040:+|nuORF'] 30023 13346 FYEEWWFLVVI True PC9_epitope_Rep2 1529.75948889813 1529.75785490379 56.609 3 -10.087367797291297 0.4768646444575533 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'SDK2|p.Q1956Pfs*30|1|0.21|ENSG00000069188|chr17:73350684-73350685|-/C|frameshift_variant'] 52979 23565 KPGRKDTIT True PC9_epitope_Rep5 1014.5821932424999 1014.58108993586 95.628 2 -10.158369700388146 0.4768646444575533 1.0 ['ENSG00000188316|ENST00000341276|ENO4'] 92434 23129 RLRLRKERVSD True PC9_epitope_Rep4 1426.84807817542 1426.84642490379 97.184 3 -10.437326965641219 0.47689123460622995 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 60455 12191 LGVVLFISFLP True PC9_epitope_Rep2 1203.72673221787 1203.72508490379 52.206 3 -10.471656182219084 0.47689123460622995 1.0 ['ENST00000352241.8_1_3:70016772-70016910:+|nuORF'] 66487 13186 LSHDLDHR True PC9_epitope_Rep5 991.4835418303901 991.48244993586 55.725 2 -10.519724682483437 0.47689123460622995 1.0 ['nc|ENSG00000138735|O76074-2|PDE5A', 'ENSG00000138735|ENST00000354960|PDE5A', 'ENST00000513594.5_1_4:120438269-120460171:-|nuORF'] 27120 13734 FLIPAWAGMWL True PC9_epitope_Rep2 1303.6787364796298 1303.67762993586 58.116 2 -10.793701035903664 0.47692769401123863 1.0 ['ENST00000377735.7_1_19:46286319-46286718:-|nuORF'] 92197 20740 RLHIRGSG True PC9_epitope_Rep4 894.51478238902 894.51368993586 87.942 2 -10.815397466558975 0.4769331070452852 1.0 ['ENST00000308027.6_1_17:6941984-6942116:+|nuORF'] 63646 13138 LMPWLILEL True PC9_epitope_Rep2 1126.64603936902 1126.64440490379 55.808 3 -11.314036842050692 0.477017798013245 1.0 ['ENST00000256689.9_1_12:46761121-46764364:-|nuORF'] 43205 17819 IFIFSAFIQVF True NCI_RA007_Epitope_Rep5 1330.7325458743 1330.7314499358602 75.336 2 -11.510083543617343 0.477017798013245 1.0 ['nc|ENSG00000213439|P0C628|OR5AC1'] 52710 15918 KMDNSRDLN True PC9_epitope_Rep4 1091.5029569456299 1091.50184993586 69.155 2 -11.592754558703628 0.477017798013245 1.0 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'KRT85|p.M288V|1|0.13|ENSG00000135443|chr12:52363335-52363335|T/C|missense_variant', 'ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386', 'CON__Q61726', 'nc|ENSG00000290966|A6NCN2|KRT87P'] 97106 18188 SDISWVWWLV True NCI_RA007_Epitope_Rep3 1289.6444591458899 1289.64280490379 79.66 3 -11.656097253083805 0.477017798013245 1.0 ['nc|ENSG00000162493|Q86YL7-2|PDPN'] 84549 7792 QARRLQED True PC9_epitope_Rep4 1014.5206556150998 1014.51954993586 37.371 2 -11.676333064830766 0.477017798013245 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q2793Rfs*37|1|0.26|ENSG00000178209|chr8:143921823-143921856|CGCACTCAGGATGCCGGCCTCCTGCAGCCTCTGA/-|frameshift_variant'] 15902 7802 EDKLRQRFR True PC9_epitope_Rep4 1246.6894522757 1246.68781490379 37.411 3 -11.692157379441063 0.477017798013245 1.0 ['ENSG00000198887|ENST00000361138|SMC5'] 100245 5975 SIWYFYYFFFS True NCI_RA007_Epitope_Rep5 1568.7016396688398 1568.6999849037902 29.666 3 -11.749088767718654 0.477017798013245 1.0 ['L1MD2_dup3350|chr5:176309943-176310863:+|1.3301102545016334|0.265229905058228|2.33|541.0|48|1|anti-sense'] 69326 17724 LTVFYFFL True PC9_epitope_Rep2 1048.5633552908798 1048.56224993586 73.457 2 -11.791025952772724 0.477017798013245 1.0 ['ENST00000541418.1_1_11:95509061-95512189:-|nuORF', 'ENST00000545813.1_1_11:95504727-95512189:-|nuORF'] 64421 24105 LPNLFSVIDYF True PC9_epitope_Rep2 1326.6859896046997 1326.6848899358602 98.221 2 -12.129030837852229 0.4770232096108277 1.0 ['ENSG00000035720|ENST00000265404|STAP1'] 43774 14990 IHLRKAGH True PC9_epitope_Rep4 930.55116789774 930.55006993586 65.598 2 -12.487404540252435 0.47703450773449224 1.0 ['nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 99901 14552 SILWVWVL True PC9_epitope_Rep2 1014.5902387450599 1014.58914993586 61.246 2 -12.489948489322266 0.47703450773449224 1.0 ['ENSG00000169715|ENST00000330439|MT1E'] 27430 21656 FLYPFPLAL True NCI_RA007_Epitope_Rep4 1079.60555445603 1079.6044499358602 93.89 2 -12.748515031217886 0.47703450773449224 1.0 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 59616 7681 LFYFIYFIFRF True NCI_RA007_Epitope_Rep5 1574.83259426874 1574.83093490379 36.248 3 -12.752365973836293 0.47703450773449224 1.0 ['ENST00000590478.1_1_17:33569582-33569933:-|nuORF'] 98476 13596 SFILWWCF True PC9_epitope_Rep2 1100.5153595526401 1100.51426993586 57.586 2 -13.430854986856914 0.47708861414308623 1.0 ['ENST00000361360.3_2_2:105473593-105473881:+|nuORF'] 29603 24489 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 106.31 3 -13.515021132672802 0.47708861414308623 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29598 23551 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 102.18 3 -13.551920469801633 0.47708861414308623 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 127240 16906 VLWWIGIL True PC9_epitope_Rep2 998.5953241254998 998.59422993586 70.273 2 -13.59785871494932 0.47708861414308623 1.0 ['ENSG00000164535|ENST00000297056|DAGLB', 'nc|ENSG00000164535|Q8NCG7-3|DAGLB', 'nc|ENSG00000164535|Q8NCG7-4|DAGLB'] 29605 24730 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 107.48 3 -13.629752423922055 0.47708861414308623 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29612 25914 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 105.47 3 -13.794377788586647 0.47708861414308623 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 72113 23706 MFLILVLIS True PC9_epitope_Rep2 1047.6402257125899 1047.6391299358602 96.655 2 -13.834828606416963 0.47708861414308623 1.0 ['ENST00000378024.8_2_11:62283482-62283515:-|nuORF'] 135777 20489 WMQRMMRSRRR True PC9_epitope_Rep4 1592.8074934000797 1592.8063899358601 86.96 2 -13.849823544563192 0.47708861414308623 1.0 ['ENST00000399325.2_1_X:133406709-133407198:+|nuORF'] 29617 26688 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 109.43 3 -13.906489005368046 0.47708861414308623 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29614 26071 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 106.22 3 -13.930537098510822 0.47708861414308623 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29610 18850 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 77.874 3 -14.04098014612978 0.47709943408133915 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29615 26148 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 106.58 3 -14.626593755193996 0.47709943408133915 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 45872 4424 ISDRSQNA True PC9_epitope_Rep4 889.42535824793 889.42426993586 23.469 2 -16.517081711380218 0.4771565726582383 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 99900 14463 SILWVWVL True PC9_epitope_Rep2 1014.5902387450599 1014.58914993586 60.903 2 -17.466394032918938 0.47716224323038414 1.0 ['ENSG00000169715|ENST00000330439|MT1E'] 107942 14038 SVWLLLLLG True PC9_epitope_Rep2 1012.6321035570398 1012.63100993586 59.276 2 -17.977167399547998 0.47716224323038414 1.0 ['nc|ENSG00000173638|P41440-3|SLC19A1', 'nc|ENSG00000173638|P41440-2|SLC19A1', 'ENSG00000173638|ENST00000311124|SLC19A1'] 130863 26466 VTCRRADA True PC9_epitope_Rep4 890.4392344902599 890.43812993586 112.46 2 -17.984401093963537 0.47716224323038414 1.0 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000494984.5_1_3:49133464-49135940:-|nuORF', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000497635.5_1_3:49133464-49135940:-|nuORF'] 80018 8844 PFFFFEDYFY True PC9_epitope_Rep2 1420.6015912743997 1420.6004899358602 39.371 2 -18.00079531568562 0.47716224323038414 1.0 ['ENST00000545576.1_1_12:8756882-8757648:-|nuORF'] 66246 12588 LSFAPFFLPF True PC9_epitope_Rep2 1184.6270181766 1184.62537490379 53.728 3 -18.506619755110545 0.47716224323038414 1.0 ['ENST00000329047.12_1_17:75316115-75316166:+|nuORF'] 81749 12519 PLPFWLYVI True PC9_epitope_Rep2 1146.64775362118 1146.64609490379 53.462 3 -18.57123007672237 0.47716224323038414 1.0 ['ENSG00000151881|ENST00000397080|TMEM267'] 61437 20203 LIWDIWVL True PC9_epitope_Rep2 1056.60080342876 1056.5997099358601 83.126 2 -18.60764612607572 0.47716224323038414 1.0 ['CES5A|p.A15D|1|0.46|ENSG00000159398|chr16:55875178-55875178|G/T|missense_variant'] 29613 25993 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 105.83 3 -18.665778736586294 0.47716224323038414 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29619 26916 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 110.72 3 -18.890837335781818 0.47716224323038414 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29616 26618 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 109.06 3 -18.91309809222151 0.47716224323038414 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29620 26979 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 111.06 3 -18.991028752513806 0.47716224323038414 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 126535 8276 VLLLLLLPTL True PC9_epitope_Rep2 1106.76786875386 1106.76676993586 37.192 2 -18.995216712725554 0.47716224323038414 1.0 ['ENST00000319190.9_1_2:47168484-47168661:+|nuORF'] 29618 26819 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 110.16 3 -19.001114509149694 0.47716224323038414 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29611 25744 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 104.74 3 -19.06484154660243 0.47716224323038414 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 123938 5641 VGRVGKNA True PC9_epitope_Rep4 799.46643521427 799.46532993586 28.495 2 -20.805066643489535 0.47716224323038414 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 135492 12207 WIPALLLTI True NCI_RA007_Epitope_Rep4 1038.6477536211798 1038.64664993586 53.95 2 -21.178647703942083 0.47716224323038414 1.0 ['ENSG00000121966|ENST00000241393|CXCR4', 'nc|ENSG00000121966|P61073-2|CXCR4'] 123979 15057 VGSARALR True PC9_epitope_Rep4 828.49298431528 828.49188993586 65.847 2 -21.241095083470995 0.47716224323038414 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 37232 22652 GVRGSGSG True PC9_epitope_Rep4 675.33000131111 675.32945496793 95.361 1 -21.35768450048378 0.47716224323038414 1.0 ['ENST00000436944.5_1_7:73098152-73100976:+|nuORF'] 61117 24001 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 104.06 3 -21.561290699163326 0.47716224323038414 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 61119 24681 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 107.23 3 -21.568730348742903 0.47716224323038414 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 61121 24863 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 108.14 3 -21.570866021019686 0.47716224323038414 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 61122 24935 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 108.5 3 -21.571710902359957 0.47716224323038414 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 61124 25079 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 109.22 3 -21.57340066504049 0.47716224323038414 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 133572 21639 VWVPFIYSF True NCI_RA007_Epitope_Rep4 1156.59571804832 1156.5946299358602 93.817 2 -22.408672530782326 0.47716224323038414 1.0 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 2963 11171 AFFLFMDLF True NCI_RA007_Epitope_Rep3 1149.5568900114497 1149.55525490379 51.047 3 -23.5457725445838 0.4771627156509867 1.0 ['ENST00000380874.3_1_6:1612762-1612825:+|nuORF'] 2964 11264 AFFLFMDLF True NCI_RA007_Epitope_Rep3 1149.5568900114497 1149.55525490379 51.422 3 -23.610015741010628 0.4771627156509867 1.0 ['ENST00000380874.3_1_6:1612762-1612825:+|nuORF'] 123230 11419 VGLGDSKK True PC9_epitope_Rep4 802.45486747106 802.45376993586 51.692 2 -24.157525842076396 0.47716812328696284 1.0 ['ENST00000563181.1_1_16:2030938-2031410:-|nuORF', 'ENST00000354249.8_2_16:2030177-2031410:-|nuORF', 'ENST00000356120.8_2_16:2030177-2031410:-|nuORF'] 114168 13496 TPKRFPRQPRR True PC9_epitope_Rep4 1437.8429332253297 1437.84127490379 59.809 3 -25.052486129254735 0.47717353081107916 1.0 ['chrX:152727863-152728074|174|66.02|0.65|6.67|-|1|CSAG1,CSAG1|1', 'ENSG00000198930|ENST00000452779|CSAG1'] 132843 23361 VVLITTLLVIP True NCI_RA007_Epitope_Rep4 1179.78424709399 1179.7825949037901 101.42 3 -25.838026420968603 0.4771996235274649 1.0 ['nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM', 'ENST00000504456.1_1_5:102343300-102364769:+|nuORF'] 81081 21380 PISVKEQHKR True PC9_epitope_Rep4 1220.69895433024 1220.6978499358602 90.407 2 -27.765438366782984 0.47720644507415144 1.0 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 38099 7709 HAWRGQDGTT True PC9_epitope_Rep4 1127.5108192073899 1127.5097299358602 37.041 2 -27.882085298240906 0.47720644507415144 1.0 ['ENST00000437099.6_1_17:9819883-9820177:-|nuORF'] 38709 5332 HGELGGHP True PC9_epitope_Rep4 802.3722004762601 802.37110993586 27.224 2 -28.06094465442864 0.47720644507415144 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2'] 91840 24807 RKKKKKKKTI True PC9_epitope_Rep4 1284.9081592508396 1284.9070699358601 103.92 2 -28.72444634861936 0.47720644507415144 1.0 ['ENST00000308713.9_3_16:29910378-29910510:-|nuORF'] 15784 12854 EDAGDRRRLKG True PC9_epitope_Rep4 1271.66944510711 1271.66779490379 57.308 3 -29.165242975917298 0.47720644507415144 1.0 ['RIMS4|p.S35R|1|0.19|ENSG00000101098|chr20:44771406-44771406|G/T|missense_variant'] 137080 24228 YAQERPDH True PC9_epitope_Rep4 1014.4519073489398 1014.45080993586 101.67 2 -29.194501951227632 0.47720644507415144 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A'] 95523 17416 RWRKRWRWRRY True PC9_epitope_Rep4 1804.0134612214297 1804.01182490379 74.984 3 -29.51858399734414 0.47720644507415144 1.0 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 37693 4261 GVYKSRAP True PC9_epitope_Rep4 876.4817509252398 876.48064993586 22.789 2 -30.31814902612928 0.4772275999007198 1.0 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B', 'ENST00000468249.1_1_22:50968911-50969740:-|nuORF'] 142009 19092 YVKRHQGV True PC9_epitope_Rep4 985.5457481641298 985.54464993586 81.528 2 -30.556843475372535 0.4772275999007198 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000554674.1_1_14:24799917-24801775:-|nuORF'] 129975 20586 VRVRGSGV True PC9_epitope_Rep4 828.4929843152798 828.49188993586 87.336 2 -32.13634418044484 0.4772330061946079 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 109192 14368 TAPQTQHVS True PC9_epitope_Rep4 967.47230844035 967.47120993586 63.175 2 -32.89469657765865 0.47723347707835656 1.0 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D'] 33045 20245 GILDFYILL True NCI_RA007_Epitope_Rep3 1065.61103375929 1065.60992993586 88.204 2 -32.90137826410724 0.47723347707835656 1.0 ['ENSG00000090402|ENST00000264382|SI'] 22563 11473 ETKKQSFKQT True PC9_epitope_Rep4 1223.6510010783097 1223.64934490379 51.892 3 -33.3190911622481 0.4772388831437435 1.0 ['ENSG00000001626|ENST00000003084|CFTR', 'nc|ENSG00000001626|P13569-2|CFTR'] 36844 18302 GVLIFALALFG True NCI_RA007_Epitope_Rep3 1119.6692173417498 1119.6681299358602 80.148 2 -34.30915991352198 0.4772600359868462 1.0 ['ENST00000512235.1_1_4:122261523-122301889:-|nuORF', 'ENSG00000186867|ENST00000394427|QRFPR'] 71675 13583 MECRRGERL True PC9_epitope_Rep4 1148.5542813258398 1148.55318993586 60.141 2 -34.989811793231446 0.4772600359868462 1.0 ['GRIK4|p.S38R|1|0.15|ENSG00000149403|chr11:120802724-120802724|C/A|missense_variant'] 136369 19728 WTIFLFLRWVL True NCI_RA007_Epitope_Rep3 1492.8594777229198 1492.85782490379 86.009 3 -35.8370517503549 0.477260506287227 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 93734 24629 RRAGKRYKF True PC9_epitope_Rep4 1180.6941437333198 1180.6935749679299 103.23 1 -36.34023960520772 0.477260506287227 1.0 ['ENSG00000111817|ENST00000644252|DSE'] 43305 23412 IFVFMFPL True NCI_RA007_Epitope_Rep3 1012.5455970517598 1012.54448993586 101.64 2 -37.65805913043838 0.47728212764197375 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 123426 18961 VGNGKGAA True PC9_epitope_Rep4 672.3554877829599 672.35493496793 81.022 1 -38.04189882100343 0.47728212764197375 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 9004 9423 AVGPKAAGDN True PC9_epitope_Rep4 898.4508447197799 898.44974993586 43.856 2 -38.20745221941302 0.47728212764197375 1.0 ['APOBR|p.V832Rfs*52|1|0.31|ENSG00000184730|chr16:28497557-28497582|GGCGGGTAGAGGCCGAGGAATCTGCA/-|frameshift_variant', 'nc|ENSG00000184730|Q0VD83-3|APOBR', 'ENSG00000184730|ENST00000564831|APOBR'] 11661 12596 DGPVHRHL True PC9_epitope_Rep4 929.4831479075701 929.48204993586 56.284 2 -39.48194557220123 0.47728212764197375 1.0 ['ENST00000378295.8_1_1:3569180-3598955:+|nuORF'] 29595 25325 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 109.45 3 -40.56972607913583 0.4772938767913642 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29596 25537 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 110.4 3 -40.65169270904733 0.4772938767913642 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29593 24523 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 106.1 3 -40.69676986053246 0.4772938767913642 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29592 24192 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 104.73 3 -40.7742949746605 0.4772938767913642 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 83489 10058 PTQDKSAV True PC9_epitope_Rep4 844.42904664604 844.4279499358599 46.356 2 -41.111619632618655 0.4772938767913642 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.F8042Lfs*12|1|0.25|ENSG00000131018|chr6:152154895-152154895|A/-|frameshift_variant', 'SYNE1|p.W7866Cfs*12|1|0.14|ENSG00000131018|chr6:152176423-152176423|C/-|frameshift_variant', 'SYNE1|p.C6762Sfs*4|1|0.25|ENSG00000131018|chr6:152236218-152236218|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1'] 10222 7222 CCCCCCCSR True PC9_epitope_Rep4 982.20799760454 982.20688993586 35.084 2 -41.33886606578968 0.4772938767913642 1.0 ['ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 138977 7803 YKNWRRQQQQQ True PC9_epitope_Rep4 1561.78620619485 1561.78456490379 37.415 3 -42.19667556179932 0.47747505557566045 1.0 ['nc|ENSG00000260528|P0CG43|FAM157C'] 119122 22353 VAHPIRPK True PC9_epitope_Rep4 916.5606699522799 916.5595699358599 94.217 2 -42.78898342241383 0.4776719708014103 1.0 ['ENSG00000110107|ENST00000227524|PRPF19'] 130614 23225 VSSLRRSKQV True PC9_epitope_Rep4 1158.6833042661 1158.6816449037901 97.565 3 -42.79129629337887 0.4776719708014103 1.0 ['ENSG00000126860|ENST00000462804|EVI2A', 'nc|ENSG00000126860|P22794-2|EVI2A'] 100564 16490 SLCCHCHS True PC9_epitope_Rep4 888.3040635404002 888.30296993586 71.399 2 -43.943717953243066 0.4777633048008932 1.0 ['ENST00000409881.1_1_7:30898614-30931617:+|nuORF'] 47461 25798 IVNRKENKLKK True PC9_epitope_Rep4 1368.8565176007999 1368.85542993586 108.77 2 -44.08319976363705 0.4777633048008932 1.0 ['nc|ENSG00000188687|Q9BY07-7|SLC4A5', 'nc|ENSG00000188687|Q9BY07-4|SLC4A5', 'nc|ENSG00000188687|Q9BY07-8|SLC4A5', 'ENST00000451608.2_1_2:74452054-74542150:-|nuORF', 'ENSG00000188687|ENST00000394019|SLC4A5', 'nc|ENSG00000188687|Q9BY07|SLC4A5', 'nc|ENSG00000188687|Q9BY07-2|SLC4A5'] 86823 12818 QLQAEKQKA True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 57.167 2 -44.845879628706506 0.4777633048008932 1.0 ['ENSG00000106244|ENST00000350498|PDAP1'] 92564 23663 RMLMKKAR True PC9_epitope_Rep4 1032.6048603467198 1032.60376993586 99.366 2 -44.925422771683834 0.4777633048008932 1.0 ['CNGB3|p.I637M|1|0.5|ENSG00000170289|chr8:86579123-86579123|G/C|missense_variant'] 32524 6171 GGGCCAGC True PC9_epitope_Rep4 626.16108770482 626.1605349679301 30.768 1 -45.12204984226666 0.4777633048008932 1.0 ['ENST00000412433.5_1_22:45181943-45197960:+|nuORF'] 131954 22642 VTSAAGHA True PC9_epitope_Rep4 712.35040240252 712.34985496793 95.322 1 -45.72366919643492 0.4777633048008932 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF'] 92026 23995 RKRRTSLKL True PC9_epitope_Rep4 1156.7516586094398 1156.75056993586 100.77 2 -45.976417554134045 0.4777633048008932 1.0 ['ENSG00000099901|ENST00000430524|RANBP1', 'RANBP1|p.R57Q|1|0.09|ENSG00000099901|chr22:20122281-20122281|G/A|missense_variant'] 93194 13529 RPPPGGKG True PC9_epitope_Rep4 764.42932142956 764.42877496793 59.935 1 -46.40517990171556 0.4777633048008932 1.0 ['ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 6474 4041 APSGSPGKDGP True PC9_epitope_Rep4 968.4563240230399 968.45522993586 21.804 2 -46.559671200946035 0.4777633048008932 1.0 ['COL3A1|p.G894A|1|0.32|ENSG00000168542|chr2:189004001-189004001|G/C|missense_variant'] 58152 15444 LEKRDLRRRKR True PC9_epitope_Rep4 1524.9437098957599 1524.9426099358602 67.338 2 -46.75418842592259 0.4777633048008932 1.0 ['ENST00000598953.1_1_19:52264477-52266695:+|nuORF'] 122698 20224 VGGGHGGP True PC9_epitope_Rep4 636.29797290684 636.29742496793 85.931 1 -47.250974079941805 0.4777633048008932 1.0 ['ENST00000306917.4_1_15:68570649-68570838:+|nuORF'] 98664 18889 SGCACGCGCE True PC9_epitope_Rep4 888.2234302612 888.22232993586 80.742 2 -47.80832670874948 0.4777633048008932 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 83609 15334 PVDFVLIVLL True NCI_RA007_Epitope_Rep3 1126.70018311686 1126.69908993586 67.87 2 -49.69123016715415 0.4777633048008932 1.0 ['ENST00000536245.1_1_6:144098468-144110182:+|nuORF'] 29591 23593 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 102.34 3 -53.91841691638608 0.4777633048008932 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 29594 25206 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 108.94 3 -53.989809783983944 0.4777633048008932 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 45463 11091 IQLFTLLLWP True NCI_RA007_Epitope_Rep3 1242.7376312547399 1242.73597490379 50.726 3 -56.120416710178525 0.4777687035448089 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4', 'nc|ENSG00000026652|Q9NRZ5-2|AGPAT4']